#1.3 23936 2 47 13 id id.uniprot id.flanking adj.P.Val.Drug_06h adj.P.Val.Drug_24h AveExpr.Drug_06h AveExpr.Drug_24h Log.P.Value.Drug_06h Log.P.Value.Drug_24h logFC.Drug_06h logFC.Drug_24h P.Value.Drug_06h P.Value.Drug_24h t.Drug_06h t.Drug_24h id.query id.mapped id.concat accessionNumber_VMsites_numVMsitesPresent_numVMsitesLocalizedBest_earliestVMsiteAA_latestVMsiteAA accession_number accession_numbers entry_name bestFilename bestScore bestDeltaForwardReverseScore Best_scoreVML Best_numPossibleVMsites_STY Best_numActualVMSites_sty Best_numLocalizedVMsites_sty Best_numAmbiguousVMsites_sty best_parent_m_over_z best_matched_parent_mass variableSites nterm StartAA previous_aa sequence next_aa sequenceVML modifications geneSymbol protein_mw numSpectraVMsiteObserved peptide_num protein_group_num protein_score species VMsitesAll Log.P.Value.Drug_06h Log.P.Value.Drug_24h channel na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na 128C_126|129C_127C|130C_126.127C 129N_127N|130N_128N|131_127N.128N exp na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na Drug_06h Drug_24h rep na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na R1|R2|R3 R1|R2|R3 pert_id na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na BYL-719 BYL-719 pert_name na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na Alpelisib Alpelisib pert_dose na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na 1 1 pert_dose_unit na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na uM uM pert_time na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na 6 24 pert_time_unit na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na h h pert_target na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na PI3Ka PI3Ka cell_id na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na T47D T47D lineage na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na breast breast alteration na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na na PIK3CA (H1047R) PIK3CA (H1047R) ______MSCINLPTV-p K7ERV3;S2-p ______MSCINLPTV 0.485131901382855 0.0793573798360612 0.0973333333333333 -0.402333333333333 5.78844834886445 14.6008318004792 0.0973333333333333 -0.402333333333333 0.263727346489949 0.0346670446601662 1.24678421320662 -2.80214756107615 K7ERV3 NotFound K7ERV3.S2.p_NotFound K7ERV3_S2sS13s_2_2_2_13 K7ERV3 K7ERV3|P04183|K7ES52 Thymidine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.31169.31169.3 11.03 9.32 1.242 4 2 2 0 667.6515 1841.004 S2s S13s Acetyl 2 (M) sCINLPTVLPGsPSK (T) S(0.99)CINLPT(0.0)VLPGS(0.99)PS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TK1 29392.6 1 5 2787.1 70.63 HUMAN 1 5.7884 -14.6008 ______MSDNDDIEV-p P61244-2;S2-p ______MSDNDDIEV 0.112544694105773 0.817311345097192 0.455333333333333 0.0273333333333333 19.8054994066124 1.22631355644066 0.455333333333333 0.0273333333333333 0.010458034238705 0.753995309783602 3.83733222973906 0.329687966278262 P61244 MAX P61244.2.S2.p_MAX P61244-2_S2sS11s_2_2_2_11 P61244-2 P61244-2|G3V2R5|G3V563|Q6V3B1 Isoform 2 of Protein max HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.10408.10408.2 13.04 13.04 99 2 2 2 0 1069.9212 1978.9039 S2s S11s Acetyl 2 (M) sDNDDIEVEsDADKR (A) S(1.0)DNDDIEVES(1.0)DADKR K:TMT10,s:Phosphorylated S MAX 17201.4 3 6 2871.1 67.78 HUMAN 1 19.8055 1.2263 ______MSDQDHSMD-p P08047;S2-p ______MSDQDHSMD 0.625010568942101 0.919701500302714 -0.106 0.012 3.7919767841904 0.51226587066122 -0.106 0.012 0.417640225498346 0.88873731062587 -0.877150918523667 0.146609451445996 P08047 SP1 P08047.S2.p_SP1 P08047_S2sS7s_2_2_2_7 P08047 P08047|P08047-3 Transcription factor Sp1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20777.20777.2 12.85 12.85 6.143 3 2 2 0 1062.4165 1963.8939 S2s S7s Acetyl 2 (M) sDQDHsMDEMTAVVK (I) S(0.99)DQDHS(0.99)MDEMT(0.0)AVVK K:TMT10,s:Phosphorylated S SP1 81319.2 4 12 1269.1 160.02 HUMAN 1 -3.792 0.5123 ______MSDQEAKPS-p B8ZZN6;S2-p ______MSDQEAKPS 0.203469268152067 0.212989392757002 0.260666666666667 0.139 13.4022131600148 8.83674041811493 0.260666666666667 0.139 0.045685531730521 0.13071515980638 2.58380249074144 1.77947483044232 B8ZZN6 NotFound B8ZZN6.S2.p_NotFound B8ZZN6_S2sS9s_2_2_2_9 B8ZZN6 B8ZZN6|P63165|B9A032|B8ZZJ0 Small ubiquitin-related modifier 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16718.16718.4 7.26 7.26 1.129 4 2 2 0 897.1984 3425.8458 S2s S9s Acetyl 2 (M) sDQEAKPsTEDLGDKKEGEYIK (L) S(0.99)DQEAKPS(0.99)T(0.0)EDLGDKKEGEY(0.0)IK K:TMT10,s:Phosphorylated S SUMO1 16701.5 1 4 2393.1 85.43 HUMAN 1 13.4022 8.8367 ______MSDSEEESQ-p P51157-2;S2-p ______MSDSEEESQ 0.706207161951739 0.380800619074585 0.101 0.192 2.84080867009246 5.57049639467341 0.101 0.192 0.519899180644565 0.277300313478176 0.687889021131411 1.2073853903185 P51157 RAB28 P51157.2.S2.p_RAB28 P51157-2_S2sS4s_2_2_2_4 P51157-2 P51157|P51157-2|P51157-3|Q8WVF3 Isoform L of Ras-related protein Rab-28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8717.8717.2 13.7 13.7 6.051 3 2 2 0 991.4037 1821.8664 S2s S4s Acetyl 2 (M) sDsEEESQDRQLK (I) S(0.99)DS(0.99)EEES(0.0)QDRQLK K:TMT10,s:Phosphorylated S RAB28 25081 2 2 6137.1 13.7 HUMAN 1 2.8408 5.5705 ______MSEKSVEAA-p P20962;S2-p ______MSEKSVEAA 0.494220590700793 0.0338102220071357 0.165333333333333 0.339333333333333 5.63572907235026 19.8286696874707 0.165333333333333 0.339333333333333 0.273166282717986 0.0104023875857819 1.21938882475699 3.83872430190225 P20962 PTMS P20962.S2.p_PTMS P20962_S2sS5s_2_2_2_5 P20962 F5GXR3|P20962 Parathymosin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20371.20579.3 10.51 10.51 7.862 3 2 2 0 694.0061 1920.069 S2s S5s Acetyl 2 (M) sEKsVEAAAELSAK (D) S(0.99)EKS(0.99)VEAAAELS(0.0)AK K:TMT10,s:Phosphorylated S PTMS 11529.7 1 4 3501.1 49.63 HUMAN 1 5.6357 19.8287 ______MSESSSKSS-p P17096;S2-p ______MSESSSKSS 0.111618830719723 0.517355142480612 0.428333333333333 -0.156333333333333 19.8930014604233 3.84370126399564 0.428333333333333 -0.156333333333333 0.0102494333098711 0.412695633237687 3.85602486782783 -0.886986578049654 P17096 HMGA1 P17096.S2.p_HMGA1 P17096_S2sS5s_2_2_2_5 P17096 P17096-3|P17096-2 High mobility group protein HMG-I/HMG-Y HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11245.11245.3 10.15 10.15 1.162 7 2 2 0 899.7824 2537.4026 S2s S5s Acetyl 2 (M) sESsSKSSQPLASKQEK (D) S(0.99)ES(0.0)S(0.99)S(0.0)KS(0.0)S(0.0)QPLAS(0.0)KQEK K:TMT10,s:Phosphorylated S HMGA1 11675.8 4 8 1152.1 172.09 HUMAN 1 19.893 -3.8437 ______MSQDTEVDM-p P08195-2;S2-p ______MSQDTEVDM 0.176527526104725 0.973596765748086 0.286666666666667 -0.00533333333333333 14.9458807009996 0.162908533150832 0.286666666666667 -0.00533333333333327 0.0320193071278267 0.963183749442902 2.86830720194978 -0.0483297679900577 P08195 SLC3A2 P08195.2.S2.p_SLC3A2 P08195-2_S2sT5t_2_2_2_5 P08195-2 P08195-2 Isoform 2 of 4F2 cell-surface antigen heavy chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30841.30841.4 15.96 12.75 1.505 4 2 2 0 1239.3435 4777.3825 S2s T5t M24m N25n Acetyl 2 (M) sQDtEVDMKEVELNELEPEKQPmnAASGAAMSLAGAEK (N) S(0.99)QDT(0.99)EVDM(0.0)KEVELN(0.0)ELEPEKQPM(0.99)N(0.99)AAS(0.0)GAAM(0.0)S(0.0)LAGAEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T,m:Oxidized methionine,n:Deamidated SLC3A2 58058 8 7 1865.1 110.46 HUMAN 1 14.9459 -0.1629 ______MSQEGDYGR-p Q9NUW8;S2-p ______MSQEGDYGR 0.456945741797906 0.00460832675551896 0.189 1.19166666666667 6.26636318029894 34.2074663785324 0.189 1.19166666666667 0.236245574602663 0.000379536337307921 1.33187844953295 7.80696367814057 Q9NUW8 TDP1 Q9NUW8.S2.p_TDP1 Q9NUW8_S2sS18s_2_2_2_18 Q9NUW8 Q9NUW8|E7EPD8|G3V2F4|Q9BRS7|G3V5H9|G3V4W8 Tyrosyl-DNA phosphodiesterase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19658.19658.4 10.82 10.82 1.355 11 2 2 0 1237.3296 4786.3721 S2s S18s Acetyl 2 (M) sQEGDYGRWTISSSDEsEEEKPKPDKPSTSSLLCAR (Q) S(0.99)QEGDY(0.0)GRWT(0.0)IS(0.0)S(0.0)S(0.0)DES(0.99)EEEKPKPDKPS(0.0)T(0.0)S(0.0)S(0.0)LLCAR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TDP1 68818.5 1 9 1900.1 108.34 HUMAN 1 6.2664 34.2075 ______MSSPPEGKL-p P51397;S2-p ______MSSPPEGKL 0.0519571788354811 0.00182152771301757 -0.547333333333333 -0.935666666666667 28.016346728587 43.1479905620252 -0.547333333333333 -0.935666666666667 0.00157893890962277 4.84396441224448e-05 -5.85057207259673 -11.6421020381018 P51397 DAP P51397.S2.p_DAP P51397_S2sS3s_2_2_2_3 P51397 B4DQ75|P51397 Death-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15140.15140.3 12.35 8.26 12.352 3 2 2 0 611.6343 1672.9522 S2s S3s Acetyl 2 (M) ssPPEGKLETK (A) S(0.99)S(0.99)PPEGKLET(0.0)K K:TMT10,s:Phosphorylated S DAP 11164.4 2 5 2099.1 97.65 HUMAN 1 -28.0163 -43.148 ______MTTSQKHRD-p O75531;T2-p ______MTTSQKHRD 0.654088558764856 0.0678710769228262 0.0783333333333333 0.324333333333333 3.45647425277494 15.5446318022731 0.0783333333333333 0.324333333333333 0.451182841155335 0.0278956714765799 0.811695709677863 2.97920388804405 O75531 BANF1 O75531.T2.p_BANF1 O75531_T2tS4s_2_2_2_4 O75531 O75531 Barrier-to-autointegration factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25757.25757.4 10.75 10.75 1.25 4 2 2 0 1122.098 4325.4461 T2t S4s Acetyl 2 (M) tTsQKHRDFVAEPMGEKPVGSLAGIGEVLGKK (L) T(0.99)T(0.0)S(0.99)QKHRDFVAEPMGEKPVGS(0.0)LAGIGEVLGKK K:TMT10,t:Phosphorylated T,s:Phosphorylated S BANF1 10286.6 106 2 2132.1 96.46 HUMAN 1 3.4565 15.5446 _____MSSPPEGKLE-p P51397;S3-p _____MSSPPEGKLE 0.0519571788354811 0.00182152771301757 -0.547333333333333 -0.935666666666667 28.016346728587 43.1479905620252 -0.547333333333333 -0.935666666666667 0.00157893890962277 4.84396441224448e-05 -5.85057207259673 -11.6421020381018 P51397 DAP P51397.S3.p_DAP P51397_S2sS3s_2_2_2_3 P51397 B4DQ75|P51397 Death-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15140.15140.3 12.35 8.26 12.352 3 2 2 0 611.6343 1672.9522 S2s S3s Acetyl 2 (M) ssPPEGKLETK (A) S(0.99)S(0.99)PPEGKLET(0.0)K K:TMT10,s:Phosphorylated S DAP 11164.4 2 5 2099.1 97.65 HUMAN 1 -28.0163 -43.148 ____MSDSEEESQDR-p P51157-2;S4-p ____MSDSEEESQDR 0.706207161951739 0.380800619074585 0.101 0.192 2.84080867009246 5.57049639467341 0.101 0.192 0.519899180644565 0.277300313478176 0.687889021131411 1.2073853903185 P51157 RAB28 P51157.2.S4.p_RAB28 P51157-2_S2sS4s_2_2_2_4 P51157-2 P51157|P51157-2|P51157-3|Q8WVF3 Isoform L of Ras-related protein Rab-28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8717.8717.2 13.7 13.7 6.051 3 2 2 0 991.4037 1821.8664 S2s S4s Acetyl 2 (M) sDsEEESQDRQLK (I) S(0.99)DS(0.99)EEES(0.0)QDRQLK K:TMT10,s:Phosphorylated S RAB28 25081 2 2 6137.1 13.7 HUMAN 1 2.8408 5.5705 ____MTTSQKHRDFV-p O75531;S4-p ____MTTSQKHRDFV 0.654088558764856 0.0678710769228262 0.0783333333333333 0.324333333333333 3.45647425277494 15.5446318022731 0.0783333333333333 0.324333333333333 0.451182841155335 0.0278956714765799 0.811695709677863 2.97920388804405 O75531 BANF1 O75531.S4.p_BANF1 O75531_T2tS4s_2_2_2_4 O75531 O75531 Barrier-to-autointegration factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25757.25757.4 10.75 10.75 1.25 4 2 2 0 1122.098 4325.4461 T2t S4s Acetyl 2 (M) tTsQKHRDFVAEPMGEKPVGSLAGIGEVLGKK (L) T(0.99)T(0.0)S(0.99)QKHRDFVAEPMGEKPVGS(0.0)LAGIGEVLGKK K:TMT10,t:Phosphorylated T,s:Phosphorylated S BANF1 10286.6 106 2 2132.1 96.46 HUMAN 1 3.4565 15.5446 ___MSEKSVEAAAEL-p P20962;S5-p ___MSEKSVEAAAEL 0.494220590700793 0.0338102220071357 0.165333333333333 0.339333333333333 5.63572907235026 19.8286696874707 0.165333333333333 0.339333333333333 0.273166282717986 0.0104023875857819 1.21938882475699 3.83872430190225 P20962 PTMS P20962.S5.p_PTMS P20962_S2sS5s_2_2_2_5 P20962 F5GXR3|P20962 Parathymosin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20371.20579.3 10.51 10.51 7.862 3 2 2 0 694.0061 1920.069 S2s S5s Acetyl 2 (M) sEKsVEAAAELSAK (D) S(0.99)EKS(0.99)VEAAAELS(0.0)AK K:TMT10,s:Phosphorylated S PTMS 11529.7 1 4 3501.1 49.63 HUMAN 1 5.6357 19.8287 ___MSESSSKSSQPL-p P17096;S5-p ___MSESSSKSSQPL 0.111618830719723 0.517355142480612 0.428333333333333 -0.156333333333333 19.8930014604233 3.84370126399564 0.428333333333333 -0.156333333333333 0.0102494333098711 0.412695633237687 3.85602486782783 -0.886986578049654 P17096 HMGA1 P17096.S5.p_HMGA1 P17096_S2sS5s_2_2_2_5 P17096 P17096-3|P17096-2 High mobility group protein HMG-I/HMG-Y HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11245.11245.3 10.15 10.15 1.162 7 2 2 0 899.7824 2537.4026 S2s S5s Acetyl 2 (M) sESsSKSSQPLASKQEK (D) S(0.99)ES(0.0)S(0.99)S(0.0)KS(0.0)S(0.0)QPLAS(0.0)KQEK K:TMT10,s:Phosphorylated S HMGA1 11675.8 4 8 1152.1 172.09 HUMAN 1 19.893 -3.8437 ___MSQDTEVDMKEV-p P08195-2;T5-p ___MSQDTEVDMKEV 0.176527526104725 0.973596765748086 0.286666666666667 -0.00533333333333333 14.9458807009996 0.162908533150832 0.286666666666667 -0.00533333333333327 0.0320193071278267 0.963183749442902 2.86830720194978 -0.0483297679900577 P08195 SLC3A2 P08195.2.T5.p_SLC3A2 P08195-2_S2sT5t_2_2_2_5 P08195-2 P08195-2 Isoform 2 of 4F2 cell-surface antigen heavy chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30841.30841.4 15.96 12.75 1.505 4 2 2 0 1239.3435 4777.3825 S2s T5t M24m N25n Acetyl 2 (M) sQDtEVDMKEVELNELEPEKQPmnAASGAAMSLAGAEK (N) S(0.99)QDT(0.99)EVDM(0.0)KEVELN(0.0)ELEPEKQPM(0.99)N(0.99)AAS(0.0)GAAM(0.0)S(0.0)LAGAEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T,m:Oxidized methionine,n:Deamidated SLC3A2 58058 8 7 1865.1 110.46 HUMAN 1 14.9459 -0.1629 _MSDQDHSMDEMTAV-p P08047;S7-p _MSDQDHSMDEMTAV 0.625010568942101 0.919701500302714 -0.106 0.012 3.7919767841904 0.51226587066122 -0.106 0.012 0.417640225498346 0.88873731062587 -0.877150918523667 0.146609451445996 P08047 SP1 P08047.S7.p_SP1 P08047_S2sS7s_2_2_2_7 P08047 P08047|P08047-3 Transcription factor Sp1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20777.20777.2 12.85 12.85 6.143 3 2 2 0 1062.4165 1963.8939 S2s S7s Acetyl 2 (M) sDQDHsMDEMTAVVK (I) S(0.99)DQDHS(0.99)MDEMT(0.0)AVVK K:TMT10,s:Phosphorylated S SP1 81319.2 4 12 1269.1 160.02 HUMAN 1 -3.792 0.5123 AAAAAAASQQGSAKN-p Q9BZK7;S119-p AAAAAAASQQGSAKN 0.279768059006979 0.95646724871047 0.154333333333333 0.00633333333333336 10.4537405129343 0.277244374789271 0.154333333333333 0.00633333333333336 0.090079496227181 0.938157084558536 2.06066290780829 0.0812513159236382 Q9BZK7 TBL1XR1 Q9BZK7.S119.p_TBL1XR1 Q9BZK7_S119s _1_1_119_119 Q9BZK7 Q9BZK7|A0A0D9SF63 F-box-like/WD repeat-containing protein TBL1XR1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16992.16992.4 22.27 22.05 3.73 2 1 1 0 649.0944 2513.3836 S119s TMT10 103 (K) LAQQQAAAAAAAAAAAsQQGSAK (N) LAQQQAAAAAAAAAAAS(0.99)QQGS(0.0)AK K:TMT10,s:Phosphorylated S TBL1XR1 56221.5 2 2 4131.1 37 HUMAN 1 10.4537 0.2772 AAAAAAVTPAAIAAA-p A9Z1X7;T855-p AAAAAAVTPAAIAAA 0.886483152928741 0.265721509234561 0.023 0.162333333333333 1.02006589313229 7.57829768607686 0.023 0.162333333333333 0.790666631555394 0.17465066009199 0.278904199347131 1.56144098132164 A9Z1X7 NotFound A9Z1X7.T855.p_NotFound A9Z1X7_T855t _1_1_855_855 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.34045.34045.4 25.89 21.91 2.247 4 1 1 0 913.9976 3572.994 T855t TMT10 845 (K) AVAAAAAAAVtPAAIAAATTTLAQEEPVAAPEPK (K) AVAAAAAAAVT(0.99)PAAIAAAT(0.0)T(0.0)T(0.0)LAQEEPVAAPEPK K:TMT10,t:Phosphorylated T SRRM1 103445.7 4 50 8.1 1346.57 HUMAN 1 1.0201 7.5783 AAAAAGDSDSWDADA-p O75822;S11-p AAAAAGDSDSWDADA 0.873152286137269 0.856030800980723 -0.0233333333333333 -0.024 1.15287694247092 0.952356133028514 -0.0233333333333333 -0.024 0.76685332637732 0.803090311680433 -0.311798289591355 -0.261858765157692 O75822 EIF3J O75822.S11.p_EIF3J O75822_S11s _1_1_11_11 O75822 O75822|O75822-3|O75822-2 Eukaryotic translation initiation factor 3 subunit J HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25592.26212.3 28.38 29.48 2.121 3 1 1 0 982.1126 2864.3536 S11s Acetyl 2 (M) AAAAAAAGDsDSWDADAFSVEDPVRK (V) AAAAAAAGDS(0.99)DS(0.0)WDADAFS(0.0)VEDPVRK K:TMT10,s:Phosphorylated S EIF3J 29176 10 1 1085.1 179.66 HUMAN 1 -1.1529 -0.9524 AAAAAPASEDEDDED-p P19338;S184-p AAAAAPASEDEDDED 0.198599898076781 0.0228338152729574 -0.954 0.603333333333333 13.6664054618856 22.4076090895663 -0.954 0.603333333333333 0.0429892089628584 0.00574432616109814 -2.63187152205898 4.41099040922448 P19338 NCL P19338.S184.p_NCL P19338_S184sS206s_2_2_184_206 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16264.16264.4 20.32 16.59 4.448 4 2 2 0 1266.9586 4904.8867 S184s S206s TMT10 177 (K) AAAAAPAsEDEDDEDDEDDEDDDDDEEDDsEEEAMETTPAK (G) AAAAAPAS(0.99)EDEDDEDDEDDEDDDDDEEDDS(0.99)EEEAMET(0.0)T(0.0)PAK K:TMT10,s:Phosphorylated S NCL 76670.1 8 26 114.1 570.88 HUMAN 1 -13.6664 22.4076 AAAAEQQSSNGPVKK-p Q16585;S13-p AAAAEQQSSNGPVKK 0.215386959262723 0.144788199463998 0.202333333333333 -0.164 12.8452581373309 11.0548978387896 0.202333333333333 -0.164 0.051936680230091 0.0784350569326177 2.48322030122097 -2.16474820104866 Q16585 SGCB Q16585.S13.p_SGCB Q16585_S13sS14sS21s_3_3_13_21 Q16585 Q16585 Beta-sarcoglycan HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26707.26707.4 11.69 11.89 99 3 3 3 0 847.4031 3130.7246 S13s S14s S21s M22m Acetyl 2 (M) AAAAAAAAEQQssNGPVKKsmREK (A) AAAAAAAAEQQS(1.0)S(1.0)NGPVKKS(1.0)M(1.0)REK K:TMT10,s:Phosphorylated S,m:Oxidized methionine SGCB 35118.5 3 2 5779.1 16.36 HUMAN 1 12.8453 -11.0549 AAAAGAASGLPGPVA-p Q96P70;S11-p AAAAGAASGLPGPVA 0.190312127567691 0.138284732890357 -0.204333333333333 -0.159333333333333 14.0935834813776 11.3193795291669 -0.204333333333333 -0.159333333333333 0.0389620367690179 0.073800966107035 -2.71011679965365 -2.21112896720839 Q96P70 IPO9 Q96P70.S11.p_IPO9 Q96P70_S11s _1_1_11_11 Q96P70 Q96P70 Importin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25430.25430.3 15.06 15.06 99 1 1 1 0 700.7074 2020.1389 S11s Acetyl 2 (M) AAAAAAGAAsGLPGPVAQGLK (E) AAAAAAGAAS(1.0)GLPGPVAQGLK K:TMT10,s:Phosphorylated S IPO9 116930.7 1 1 5318.1 20.65 HUMAN 1 -14.0936 -11.3194 AAAAGSASPRSWDEA-p Q96S55;S153-p AAAAGSASPRSWDEA 0.476862386005606 0.0446267912162327 0.101333333333333 0.266666666666667 5.91773472625317 18.0755695642608 0.101333333333333 0.266666666666667 0.255992078972134 0.0155755375290688 1.26989482823113 3.47471554399827 Q96S55 WRNIP1 Q96S55.S153.p_WRNIP1 Q96S55_S153s _1_1_153_153 Q96S55 Q96S55|Q96S55-2 ATPase WRNIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.3813.3813.5 20 20 1.43 3 1 1 0 496.4837 2398.4246 S153s TMT10 137 (R) KGSGKRPAAAAAAGSAsPR (S) KGS(0.0)GKRPAAAAAAGS(0.0)AS(0.99)PR K:TMT10,s:Phosphorylated S WRNIP1 72873.4 17 5 519.1 284.6 HUMAN 1 5.9177 18.0756 AAAAPGASPSPGGDA-p P52701;S41-p AAAAPGASPSPGGDA 0.820921349633823 0.0728417465901325 0.0593333333333333 -0.201333333333333 1.64764053320151 15.1127285678792 0.0593333333333333 -0.201333333333333 0.684283308749365 0.0308125146572893 0.429273974832527 -2.89771203584319 P52701 MSH6 P52701.S41.p_MSH6 P52701_S41s _1_1_41_41 P52701 P52701|P52701-3|P52701-2|F8WAX8|F8W7G9 DNA mismatch repair protein Msh6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15337.15337.4 20.88 20.88 2.392 3 1 1 0 738.6141 2871.4699 S41s TMT10 34 (R) AAAAPGAsPSPGGDAAWSEAGPGPRPLAR (S) AAAAPGAS(0.99)PS(0.0)PGGDAAWS(0.0)EAGPGPRPLAR s:Phosphorylated S MSH6 154608.6 7 4 875.1 209.27 HUMAN 1 1.6476 -15.1127 AAAAREHSPRPAEEP-p Q9UQL6-3;S1109-p AAAAREHSPRPAEEP 0.647381806697455 0.0584454148473786 -0.0726666666666667 0.302333333333333 3.53701195678069 16.427484494075 -0.0726666666666667 0.302333333333333 0.442892987845908 0.0227641558678374 -0.827525496738928 3.14840946864621 Q9UQL6 HDAC5 Q9UQL6.3.S1109.p_HDAC5 Q9UQL6-3_S1109s _1_1_1109_1109 Q9UQL6-3 Q9UQL6-3|Q9UQL6-2 Isoform 3 of Histone deacetylase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12598.12598.3 12.66 12.66 99 1 1 1 0 752.6795 2176.0542 S1109s TMT10 1107 (R) EHsPRPAEEPMEQEPAL (-) EHS(1.0)PRPAEEPMEQEPAL s:Phosphorylated S HDAC5 122845.2 3 10 1282.2 158.68 HUMAN 1 -3.537 16.4275 AAADKHNSVEDSVTK-p O60563;S495-p AAADKHNSVEDSVTK 0.182372527376184 0.101598887859872 0.213333333333333 0.349666666666667 14.5340612606917 13.1205510421059 0.213333333333333 0.349666666666667 0.0352041509028843 0.0487466635372452 2.79151216213542 2.53140812441645 O60563 CCNT1 O60563.S495.p_CCNT1 O60563_S495s _1_1_495_495 O60563 O60563 Cyclin-T1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7370.7370.4 16.46 15.16 3.695 3 1 1 0 644.5915 2495.3821 S495s TMT10 486 (K) VHAAADKHNsVEDSVTK (S) VHAAADKHNS(0.99)VEDS(0.0)VT(0.0)K K:TMT10,s:Phosphorylated S CCNT1 81082.5 1 2 3360.1 52.89 HUMAN 1 14.5341 13.1206 AAAEQQSSNGPVKKS-p Q16585;S14-p AAAEQQSSNGPVKKS 0.215386959262723 0.144788199463998 0.202333333333333 -0.164 12.8452581373309 11.0548978387896 0.202333333333333 -0.164 0.051936680230091 0.0784350569326177 2.48322030122097 -2.16474820104866 Q16585 SGCB Q16585.S14.p_SGCB Q16585_S13sS14sS21s_3_3_13_21 Q16585 Q16585 Beta-sarcoglycan HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26707.26707.4 11.69 11.89 99 3 3 3 0 847.4031 3130.7246 S13s S14s S21s M22m Acetyl 2 (M) AAAAAAAAEQQssNGPVKKsmREK (A) AAAAAAAAEQQS(1.0)S(1.0)NGPVKKS(1.0)M(1.0)REK K:TMT10,s:Phosphorylated S,m:Oxidized methionine SGCB 35118.5 3 2 5779.1 16.36 HUMAN 1 12.8453 -11.0549 AAAGAGCSPRPKYQA-p Q68DK7;S126-p AAAGAGCSPRPKYQA 0.921903533957405 0.00948329592234832 -0.0163333333333333 -0.457 0.692431255404866 28.5600168927652 -0.0163333333333333 -0.457 0.852622667515699 0.00139315138398974 -0.194842846202826 -5.99678154713175 Q68DK7 MSL1 Q68DK7.S126.p_MSL1 Q68DK7_S126s _1_1_126_126 Q68DK7 Q68DK7|J3KSZ8|J3QQY0 Male-specific lethal 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8957.8957.3 18.12 18.12 99 1 1 1 0 797.4068 2310.2389 S126s TMT10 111 (K) QAGIGGEPAAAGAGCsPRPK (Y) QAGIGGEPAAAGAGCS(1.0)PRPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MSL1 67811.9 4 4 324.1 362.01 HUMAN 1 -0.6924 -28.56 AAAGALGSPGLPLRK-p O75145;S1164-p AAAGALGSPGLPLRK 0.129324380397121 0.00267960937510165 -0.426333333333333 -0.799333333333333 18.4016521894008 39.0695014989473 -0.426333333333333 -0.799333333333333 0.0144488998571184 0.000123893878885427 -3.54401293595819 -9.72061044917599 O75145 PPFIA3 O75145.S1164.p_PPFIA3 O75145_S1164s _1_1_1164_1164 O75145 O75145|O75145-2|A0A0C4DGR8 Liprin-alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18062.18062.3 16.33 16.33 6.638 2 1 1 0 668.7189 1924.1744 S1164s TMT10 1156 (R) SAAAGALGsPGLPLRK (L) S(0.0)AAAGALGS(0.99)PGLPLRK K:TMT10,s:Phosphorylated S PPFIA3 134064.6 5 15 248.2 410.18 HUMAN 1 -18.4017 -39.0695 AAAGDSDSWDADAFS-p O75822;S13-p AAAGDSDSWDADAFS 0.797934704623668 0.105497732210162 0.0363333333333333 0.192666666666667 1.8927819954569 12.9045893347714 0.0363333333333333 0.192666666666667 0.646728203090038 0.0512319712497557 0.484924712832431 2.49253299364783 O75822 EIF3J O75822.S13.p_EIF3J O75822_S11sS13s_2_2_11_13 O75822 O75822|O75822-3|O75822-2 Eukaryotic translation initiation factor 3 subunit J HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31128.31386.3 8.35 8.35 3.601 3 2 2 0 1008.7573 2864.3536 S11s S13s Acetyl 2 (M) AAAAAAAGDsDsWDADAFSVEDPVRK (V) AAAAAAAGDS(0.99)DS(0.99)WDADAFS(0.0)VEDPVRK K:TMT10,s:Phosphorylated S EIF3J 29176 2 5 1085.1 179.66 HUMAN 1 1.8928 12.9046 AAAGGTVSGPSSACK-p A0A087X2H1;S248-p AAAGGTVSGPSSACK 0.341848649788872 0.0013036590626876 -0.199666666666667 -1.074 8.66272894333653 46.9538178584395 -0.199666666666667 -1.074 0.136058947050394 2.01659280880354e-05 -1.74998035962096 -13.7493235100363 A0A087X2H1 NotFound A0A087X2H1.S248.p_NotFound A0A087X2H1_S248s _1_1_248_248 A0A087X2H1 A0A087X2H1 E3 ubiquitin-protein ligase HECTD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9665.9665.3 13.21 13.21 1.155 4 1 1 0 767.382 2220.1629 S248s TMT10 240 (R) MAAAGGTVsGPSSACKPGR (S) MAAAGGT(0.0)VS(0.99)GPS(0.0)S(0.0)ACKPGR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HECTD1 292594.4 2 1 365.1 342.23 HUMAN 1 -8.6627 -46.9538 AAAGIQWSEEETEDE-p P46087-4;S214-p AAAGIQWSEEETEDE 0.252409750747624 0.00844515777214221 -0.249666666666667 0.537333333333333 11.4021250828666 29.4358291975194 -0.249666666666667 0.537333333333334 0.0724081566933304 0.0011387203454884 -2.22671433880106 6.25262673127759 P46087 NOP2 P46087.4.S214.p_NOP2 P46087-4_S214s _1_1_214_214 P46087-4 P46087-4 Isoform 4 of Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18123.18123.3 20.66 20.66 3.016 2 1 1 0 949.751 2767.2834 S214s TMT10 206 (R) EAAAGIQWsEEETEDEEEEK (E) EAAAGIQWS(0.99)EEET(0.0)EDEEEEK K:TMT10,s:Phosphorylated S NOP2 93257.6 2 3 1090.1 179.08 HUMAN 1 -11.4021 29.4358 AAAGRAPSPPPPGSE-p Q96GP6;S687-p AAAGRAPSPPPPGSE 0.779223135795268 0.0399417031375226 -0.05 0.263 2.0804923596193 18.7540559122595 -0.05 0.263 0.61937085302768 0.0133227662677283 -0.526554771141416 3.61339649235244 Q96GP6 SCARF2 Q96GP6.S687.p_SCARF2 Q96GP6_S687s _1_1_687_687 Q96GP6 A0A096LNX8|Q96GP6|Q96GP6-2 Scavenger receptor class F member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6912.6912.4 14.71 11.97 1.169 5 1 1 0 709.1155 2753.4735 S687s TMT10 677 (K) HSAAAAGRAPsPPPPGSEAAPSPSK (R) HS(0.0)AAAAGRAPS(0.99)PPPPGS(0.0)EAAPS(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S SCARF2 97041.7 3 3 2656.1 74.96 HUMAN 1 -2.0805 18.7541 AAAGSGPSPPGSPGH-p Q9BTU6;S47-p AAAGSGPSPPGSPGH 0.44764393076847 0.0774573472910955 0.108 0.220666666666667 6.43853509074308 14.7397210672207 0.108 0.220666666666667 0.227063062419593 0.0335759178236319 1.36232758869457 2.82797047271831 Q9BTU6 PI4K2A Q9BTU6.S47.p_PI4K2A Q9BTU6_S47s _1_1_47_47 Q9BTU6 Q9BTU6 Phosphatidylinositol 4-kinase type 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5527.5527.4 17.45 17.45 2.197 3 1 1 0 571.2775 2202.1213 S47s TMT10 38 (R) VAAAAGSGPsPPGSPGHDRER (Q) VAAAAGS(0.0)GPS(0.99)PPGS(0.0)PGHDRER s:Phosphorylated S PI4K2A 54420.7 9 2 2560.1 78.53 HUMAN 1 6.4385 14.7397 AAAGVGGSLRAQVER-p Q9BRK4;S570-p AAAGVGGSLRAQVER 0.248798577375663 0.695834973634983 -0.166 -0.07 11.5319255842007 2.16444661250066 -0.166 -0.07 0.0702760659266217 0.607512668520883 -2.24957556091224 -0.544854387096519 Q9BRK4 LZTS2 Q9BRK4.S570.p_LZTS2 Q9BRK4_S570s _1_1_570_570 Q9BRK4 Q9BRK4 Leucine zipper putative tumor suppressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7852.7852.2 13.89 13.89 99 1 1 1 0 584.308 1087.6421 S570s TMT10 563 (R) AAAGVGGsLR (A) AAAGVGGS(1.0)LR s:Phosphorylated S LZTS2 73442.7 2 9 710.1 238.65 HUMAN 1 -11.5319 -2.1644 AAAKSDDTSDDDFME-p O94992;T236-p AAAKSDDTSDDDFME 0.622254667685309 0.0291117805384549 0.0853333333333333 0.303666666666667 3.82864660600255 20.7909436263906 0.0853333333333333 0.303666666666667 0.414128709843493 0.00833500063711679 0.884230219904396 4.04680981686678 O94992 HEXIM1 O94992.T236.p_HEXIM1 O94992_T236tS237s_2_2_236_237 O94992 O94992 Protein HEXIM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20321.20321.3 23.89 23.89 3.78 5 2 2 0 1391.8618 4013.6246 T236t S237s Hydrogen 229 (R) AAAKSDDtsDDDFMEEGGEEDGGSDGMGGDGSEFLQR (D) AAAKS(0.0)DDT(0.99)S(0.99)DDDFMEEGGEEDGGS(0.0)DGMGGDGS(0.0)EFLQR K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S HEXIM1 40908 11 6 1285.2 158.28 HUMAN 2 3.8286 20.7909 AAALAPASLTSARMA-p Q9UQ35;S2365-p AAALAPASLTSARMA 0.649743378726889 0.994787146534929 0.0856666666666667 0.000666666666666667 3.51204013782342 0.0315635345928224 0.0856666666666667 0.000666666666666669 0.445446946486614 0.99275857396927 0.822625483016374 0.00950182013738232 Q9UQ35 SRRM2 Q9UQ35.S2365.p_SRRM2 Q9UQ35_S2365s _1_1_2365_2365 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15802.15802.2 12.76 12.76 2.256 4 1 1 0 805.4301 1529.8849 S2365s TMT10 2357 (R) TAAALAPAsLTSAR (M) T(0.0)AAALAPAS(0.99)LT(0.0)S(0.0)AR s:Phosphorylated S SRRM2 300351.7 3 151 2.1 3310.34 HUMAN 1 3.512 0.0316 AAALGQRTICHYIVE-p Q13574-5;T878-p AAALGQRTICHYIVE 0.885830915707407 0.588867778548827 -0.0223333333333333 0.13 1.03492324890985 3.10862091307844 -0.0223333333333334 0.13 0.787966356735904 0.488807553828079 -0.282615760405517 0.742283018097424 Q13574 DGKZ Q13574.5.T878.p_DGKZ Q13574-5_T878t _1_1_878_878 Q13574-5 Q13574|Q13574-3|Q13574-5|Q13574-7|Q13574-4 Isoform 5 of Diacylglycerol kinase zeta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30774.30774.3 19.65 19.65 7.873 3 1 1 0 744.3848 2151.1706 T878t TMT10 878 (R) tICHYIVEAGASLMK (T) T(0.99)ICHY(0.0)IVEAGAS(0.0)LMK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T DGKZ 106119.2 2 6 1861.1 110.66 HUMAN 1 -1.0349 3.1086 AAALQAKSDEKAAVA-p P36578;S365-p AAALQAKSDEKAAVA 0.800471965711008 0.0794979033640694 -0.0556666666666667 -0.211333333333333 1.86119346958048 14.5910800851161 -0.0556666666666667 -0.211333333333333 0.651449346928092 0.0347449740367663 -0.477838088530945 -2.80033737706035 P36578 RPL4 P36578.S365.p_RPL4 P36578_S365s _1_1_365_365 P36578 P36578|H3BM89 60S ribosomal protein L4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14784.14784.3 16.79 16.79 99 1 1 1 0 728.4079 2103.2377 S365s TMT10 354 (K) AAAAAAALQAKsDEK (A) AAAAAAALQAKS(1.0)DEK K:TMT10,s:Phosphorylated S RPL4 47981.8 2 5 2767.1 71.26 HUMAN 1 -1.8612 -14.5911 AAAMNLASARTPAIP-p Q9UQ35;S2244-p AAAMNLASARTPAIP 0.437121663346479 0.0849545450792066 -0.141 0.196666666666667 6.6202087689894 14.173149439271 -0.141 0.196666666666667 0.21776050905393 0.0382547225120172 -1.3943548762519 2.72310666416534 Q9UQ35 SRRM2 Q9UQ35.S2244.p_SRRM2 Q9UQ35_S2244s _1_1_2244_2244 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20590.20590.3 17.5 16.96 10.265 2 1 1 0 575.2957 1643.91 S2244s TMT10 2232 (R) IPAASAAAMNLAsAR (T) IPAAS(0.0)AAAMNLAS(0.99)AR s:Phosphorylated S SRRM2 300351.7 1 143 2.1 3310.34 HUMAN 1 -6.6202 14.1731 AAAMNLASPRTAVAP-p Q9UQ35;S2272-p AAAMNLASPRTAVAP 0.623601332946656 0.034671948344363 -0.07 -0.264333333333333 3.81111944217134 19.6673974660634 -0.07 -0.264333333333333 0.415803418739065 0.0107959348084616 -0.880848259983414 -3.80444643116499 Q9UQ35 SRRM2 Q9UQ35.S2272.p_SRRM2 Q9UQ35_S2272s _1_1_2272_2272 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16124.16325.3 19.78 19.78 19.781 2 1 1 0 550.9458 1570.8573 S2272s TMT10 2261 (R) TPAAAAAMNLAsPR (T) T(0.0)PAAAAAMNLAS(0.99)PR s:Phosphorylated S SRRM2 300351.7 14 144 2.1 3310.34 HUMAN 1 -3.8111 -19.6674 AAAPPQPSPPPTKFI-p J3KR72;S589-p AAAPPQPSPPPTKFI 0.237800187730078 0.100071183612032 -0.178 -0.190666666666667 11.9503134737042 13.2126995901421 -0.178 -0.190666666666667 0.0638217418002501 0.0477232531978605 -2.32352467957634 -2.54804038055468 J3KR72 NotFound J3KR72.S589.p_NotFound J3KR72_S589s _1_1_589_589 J3KR72 J3KR72|P49848-3|P49848-2 Transcription initiation factor TFIID subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10450.10450.3 11.55 11.55 11.546 2 1 1 0 599.6633 1717.0049 S589s TMT10 582 (R) AAAPPQPsPPPTK (F) AAAPPQPS(0.99)PPPT(0.0)K K:TMT10,s:Phosphorylated S TAF6 79746 3 2 2409.1 84.76 HUMAN 1 -11.9503 -13.2127 AAAPSPGSARSMGSH-p Q9H3Q1;S295-p AAAPSPGSARSMGSH 0.843235042663129 0.90345905210967 0.0373333333333333 0.012 1.43320506479333 0.614597208578368 0.0373333333333333 0.012 0.71891822524654 0.868041081029421 0.379271243217292 0.174182384347628 Q9H3Q1 CDC42EP4 Q9H3Q1.S295.p_CDC42EP4 Q9H3Q1_S292sS295s_2_2_292_295 Q9H3Q1 Q9H3Q1|Q9H3Q1-2 Cdc42 effector protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26656.26656.3 23.4 23.4 23.399 4 2 2 0 1072.8248 3056.5275 S292s S295s TMT10 269 (K) AGPDLPSLPSHALEDEGWAAAAPsPGsAR (S) AGPDLPS(0.0)LPS(0.0)HALEDEGWAAAAPS(0.99)PGS(0.99)AR s:Phosphorylated S CDC42EP4 38036.3 3 14 635.1 256.47 HUMAN 1 1.4332 0.6146 AAAQAVETPGWKAPE-p Q9Y5Z4;T22-p AAAQAVETPGWKAPE 0.496266089364518 0.0333539733190313 -0.108666666666667 0.286666666666667 5.60310331069121 19.9076931747411 -0.108666666666667 0.286666666666667 0.275226133449164 0.01021481916246 -1.21352212054068 3.85558168800556 Q9Y5Z4 HEBP2 Q9Y5Z4.T22.p_HEBP2 Q9Y5Z4_T22t _1_1_22_22 Q9Y5Z4 Q9Y5Z4|Q5THN1 Heme-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26584.26584.5 20.26 14.95 12.256 3 1 1 0 888.4243 4358.1051 T22t Acetyl 2 (M) AEPLQPDPGAAEDAAAQAVEtPGWKAPEDAGPQPGSYEIR (H) AEPLQPDPGAAEDAAAQAVET(0.99)PGWKAPEDAGPQPGS(0.0)Y(0.0)EIR K:TMT10,t:Phosphorylated T HEBP2 22875 3 1 3821.1 42.48 HUMAN 1 -5.6031 19.9077 AAARKARTPCRLPPP-p A0A087X1K6;T94-p AAARKARTPCRLPPP 0.18863765659071 0.0063803902699255 -0.401 -0.649333333333333 14.2076504427726 31.5846269486666 -0.401 -0.649333333333333 0.0379520252004029 0.000694284236949544 -2.73112373736333 -6.91738408749009 A0A087X1K6 NotFound A0A087X1K6.T94.p_NotFound A0A087X1K6_T94tS103s_2_2_94_103 A0A087X1K6 A0A087X1K6 Krueppel-like factor 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10557.10557.4 9.22 9.22 99 2 2 2 0 606.8126 2264.299 T94t S103s TMT10 94 (R) tPCRLPPPPsPPPPAPK (A) T(1.0)PCRLPPPPS(1.0)PPPPAPK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S KLF13 31681 1 3 4960.1 24.66 HUMAN 1 -14.2077 -31.5846 AAARKPLTPKPKRVQ-p O14686-3;T4522-p AAARKPLTPKPKRVQ 0.246056182001951 0.0202348179849632 -0.176666666666667 -0.528666666666667 11.6543450959901 23.1971558121058 -0.176666666666667 -0.528666666666667 0.068322773905585 0.00478943649097974 -2.27117081285141 -4.59598555736716 O14686 KMT2D O14686.3.T4522.p_KMT2D O14686-3_T4522t _1_1_4522_4522 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9815.9815.3 9.78 2.15 99 1 1 1 0 635.7414 1825.2445 T4522t TMT10 4519 (R) KPLtPKPK (R) KPLT(1.0)PKPK K:TMT10,t:Phosphorylated T KMT2D 600227.3 3 40 17.1 1042.08 HUMAN 1 -11.6543 -23.1972 AAARLPPSPTRCQQI-p Q9H7P6;S309-p AAARLPPSPTRCQQI 0.368197886393332 0.771637506922735 0.132333333333333 -0.032 8.04493498962893 1.55743318070422 0.132333333333333 -0.032 0.156857937786906 0.69864520373761 1.64295475693078 -0.408354053277053 Q9H7P6 MVB12B Q9H7P6.S309.p_MVB12B Q9H7P6_S309s _1_1_309_309 Q9H7P6 Q9H7P6 Multivesicular body subunit 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8464.9082.2 8.51 3.92 1.367 2 1 1 0 538.789 996.6039 S309s TMT10 306 (R) LPPsPTR (C) LPPS(0.99)PT(0.0)R s:Phosphorylated S MVB12B 36018.3 5 2 4260.1 34.55 HUMAN 1 8.0449 -1.5574 AAASEPHS_______-p Q7Z4H3;S204-p AAASEPHS_______ 0.71053831556088 0.888263863819115 -0.0693333333333333 -0.016 2.79099708167679 0.723013297454255 -0.0693333333333334 -0.016 0.525896513768366 0.846639779976245 -0.677632060041155 -0.20285997546307 Q7Z4H3 HDDC2 Q7Z4H3.S204.p_HDDC2 Q7Z4H3_S204s _1_1_204_204 Q7Z4H3 Q7Z4H3|Q7Z4H3-2 HD domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9050.9050.2 14.91 14.91 4.554 4 1 1 0 782.8632 1484.7543 S204s TMT10 192 (R) STNIAAAASEPHs (-) S(0.0)T(0.0)NIAAAAS(0.0)EPHS(0.99) s:Phosphorylated S HDDC2 23561.2 2 1 5976.1 14.91 HUMAN 1 -2.791 -0.723 AAASQPPSKRKRRWD-p O75533;S194-p AAASQPPSKRKRRWD 0.70824080408367 0.0654939728084641 -0.054 -0.214666666666667 2.81606396136975 15.7517354847919 -0.054 -0.214666666666667 0.522869854612703 0.0265966201949725 -0.682798621270321 -3.01857269938147 O75533 SF3B1 O75533.S194.p_SF3B1 O75533_S194s _1_1_194_194 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10278.10278.3 19.75 14.4 6.797 2 1 1 0 588.6527 1683.9794 S194s TMT10 183 (K) VVNGAAASQPPsK (R) VVNGAAAS(0.0)QPPS(0.99)K K:TMT10,s:Phosphorylated S SF3B1 146569.5 11 7 53.1 735.77 HUMAN 1 -2.8161 -15.7517 AAASVRQSPGPALAR-p P85037;S101-p AAASVRQSPGPALAR 0.0887698163036001 0.0868947751848577 -0.403333333333333 -0.394666666666667 22.4043843773351 14.0471415371531 -0.403333333333333 -0.394666666666667 0.0057485930073114 0.0393809189630488 -4.41501936954921 -2.69995160968025 P85037 FOXK1 P85037.S101.p_FOXK1 P85037_S101s _1_1_101_101 P85037 P85037 Forkhead box protein K1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7521.7521.2 13.1 8.98 99 1 1 1 0 603.3159 1125.6578 S101s TMT10 100 (R) QsPGPALAR (L) QS(1.0)PGPALAR s:Phosphorylated S FOXK1 75912.4 3 1 686.1 243.66 HUMAN 1 -22.4044 -14.0471 AAATAPPSPGPAQPG-p Q6SPF0;S161-p AAATAPPSPGPAQPG 0.512060896825979 0.0133262814067011 0.141333333333333 -0.454666666666667 5.37413088605877 26.0831502281912 0.141333333333333 -0.454666666666667 0.290126174365639 0.00246425120266027 1.17219909409993 -5.31642734399977 Q6SPF0 SAMD1 Q6SPF0.S161.p_SAMD1 Q6SPF0_S161s _1_1_161_161 Q6SPF0 Q6SPF0 Atherin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9273.9273.3 22.31 22.31 5.036 2 1 1 0 689.0179 1985.0766 S161s TMT10 151 (R) AAAAAATAPPsPGPAQPGPR (A) AAAAAAT(0.0)APPS(0.99)PGPAQPGPR s:Phosphorylated S SAMD1 56222 1 3 1432.1 142.81 HUMAN 1 5.3741 -26.0832 AAATGNASPGKLEHS-p Q8NB78;S247-p AAATGNASPGKLEHS 0.95468712279199 0.0972015680829077 -0.00900000000000001 -0.188333333333333 0.394843425738567 13.3848767097792 -0.00900000000000001 -0.188333333333333 0.913094354085132 0.0458682666982434 -0.114335656311547 -2.57919098044088 Q8NB78 KDM1B Q8NB78.S247.p_KDM1B Q8NB78_S247s _1_1_247_247 Q8NB78 Q8NB78 Lysine-specific histone demethylase 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9032.9032.3 17.4 13.62 2.55 3 1 1 0 769.4229 2226.2809 S247s TMT10 240 (R) AAATGNAsPGKLEHSK (A) AAAT(0.0)GNAS(0.99)PGKLEHS(0.0)K K:TMT10,s:Phosphorylated S KDM1B 93523 10 3 2230.1 92.53 HUMAN 1 -0.3948 -13.3849 AAATTPATSPPAVNT-p A0A0U1RRH6;T155-p AAATTPATSPPAVNT 0.095467434057863 0.0689517361438301 0.314666666666667 0.255333333333333 21.6395815265097 15.4449837367286 0.314666666666667 0.255333333333333 0.00685554281280329 0.0285431320247484 4.23999383913144 2.96032991995944 A0A0U1RRH6 NotFound A0A0U1RRH6.T155.p_NotFound A0A0U1RRH6_T151tT152tT155t_3_3_151_155 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23015.23015.5 9.79 9.79 1.104 16 3 3 0 994.2744 4727.4151 T151t T152t T155t TMT10 138 (K) ATVSENVAASAAAttPAtSPPAVNTSPSVPTTTTATEEQVSEPK (K) AT(0.0)VS(0.0)ENVAAS(0.0)AAAT(0.99)T(0.99)PAT(0.99)S(0.0)PPAVNT(0.0)S(0.0)PS(0.0)VPT(0.0)T(0.0)T(0.0)T(0.0)AT(0.0)EEQVS(0.0)EPK K:TMT10,t:Phosphorylated T PHF14 109152.4 1 26 126.1 543.2 HUMAN 1 21.6396 15.445 AAAVGRESPGAAATS-p Q7L2J0;S69-p AAAVGRESPGAAATS 0.215386959262723 0.0334131853243202 0.199666666666667 0.301333333333333 12.8451706989577 19.8982200481076 0.199666666666667 0.301333333333333 0.0519377259041062 0.0102371247391754 2.48320458695319 3.85355873386962 Q7L2J0 MEPCE Q7L2J0.S69.p_MEPCE Q7L2J0_S69s _1_1_69_69 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7257.7257.4 34.92 34.92 5.249 7 1 1 0 857.9038 3348.6301 S69s TMT10 54 (R) CAPSAGSPAAAVGREsPGAAATSSSGPQAQQHR (G) CAPS(0.0)AGS(0.0)PAAAVGRES(0.99)PGAAAT(0.0)S(0.0)S(0.0)S(0.0)GPQAQQHR C:Carbamidomethylation,s:Phosphorylated S MEPCE 74981.5 3 2 428.1 317.7 HUMAN 1 12.8452 19.8982 AAAVLPGSPAAKEGS-p Q8TDM6;S747-p AAAVLPGSPAAKEGS 0.715960741537752 0.0204193748734682 -0.052 -0.328666666666667 2.73751851327544 23.1337315857155 -0.052 -0.328666666666667 0.532412383988897 0.00485989449837132 -0.666575783035598 -4.58094357594433 Q8TDM6 DLG5 Q8TDM6.S747.p_DLG5 Q8TDM6_S747s _1_1_747_747 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26781.26781.3 17.25 17.25 6.108 4 1 1 0 909.1416 2645.4551 S747s TMT10 729 (K) DSGISLENGVYAAAVLPGsPAAK (E) DS(0.0)GIS(0.0)LENGVY(0.0)AAAVLPGS(0.99)PAAK K:TMT10,s:Phosphorylated S DLG5 215575.4 4 8 34.1 890.58 HUMAN 1 -2.7375 -23.1337 AAAVRDISEASVFDA-p P62854;S54-p AAAVRDISEASVFDA 0.834918238854484 0.677448665002303 -0.0366666666666667 0.0403333333333334 1.51187325099033 2.31128339248179 -0.0366666666666667 0.0403333333333333 0.706012962608148 0.587315768002329 -0.397767776309491 0.576614434784794 P62854 RPS26 P62854.S54.p_RPS26 P62854_S54s _1_1_54_54 P62854 P62854 40S ribosomal protein S26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33235.33235.4 17.7 12.98 2.157 3 1 1 0 779.6688 3035.6818 S54s TMT10 43 (R) NIVEAAAVRDIsEASVFDAYVLPK (L) NIVEAAAVRDIS(0.99)EAS(0.0)VFDAY(0.0)VLPK K:TMT10,s:Phosphorylated S RPS26 13300.5 3 1 3630.1 46.56 HUMAN 1 -1.5119 2.3113 AACEKLPTPTPQVVK-p E7EVA0;T1462-p AACEKLPTPTPQVVK 0.183956421457418 0.132411490459811 -0.331 -0.402333333333333 14.4545807636059 11.5751705718301 -0.331 -0.402333333333333 0.035854355780066 0.0695797626284026 -2.7767694393443 -2.25612116000463 E7EVA0 NotFound E7EVA0.T1462.p_NotFound E7EVA0_T1462t _1_1_1462_1462 E7EVA0 E7EVA0 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31866.31866.4 12.25 13.93 1.243 5 1 1 0 837.7137 3267.8477 T1462t TMT10 1446 (K) SSPLEVLESAACEKLPtPTPQVVK (E) S(0.0)S(0.0)PLEVLES(0.0)AACEKLPT(0.99)PT(0.0)PQVVK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MAP4 246695.2 1 24 38.1 865.62 HUMAN 1 -14.4546 -11.5752 AACQLRISQHEAKIK-p P33176;S637-p AACQLRISQHEAKIK 0.446818262863881 0.286329724528823 -0.117 0.187666666666667 6.45404108436176 7.16531166684306 -0.117 0.187666666666667 0.226253804959661 0.192074111685051 -1.36506510092455 1.4894989485836 P33176 KIF5B P33176.S637.p_KIF5B P33176_S637s _1_1_637_637 P33176 P33176 Kinesin-1 heavy chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13554.13554.4 14.86 14.86 99 1 1 1 0 573.803 2212.2272 S637s TMT10 628 (K) ELAACQLRIsQHEAK (I) ELAACQLRIS(1.0)QHEAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIF5B 110424.6 1 4 2011.1 102.48 HUMAN 1 -6.454 7.1653 AACRPGCSQKLRVRF-p O95685;S98-p AACRPGCSQKLRVRF 0.249590373158277 0.295152200749048 -0.262666666666667 -0.103 11.5022369603482 6.99622552391049 -0.262666666666667 -0.103 0.0707581230162841 0.199699716167049 -2.24434340400472 -1.4599493626316 O95685 PPP1R3D O95685.S98.p_PPP1R3D O95685_S98s _1_1_98_98 O95685 O95685 Protein phosphatase 1 regulatory subunit 3D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5595.5595.3 13.21 13.21 99 1 1 1 0 699.676 2017.0472 S98s TMT10 85 (K) AAGAPGAACRPGCsQK (L) AAGAPGAACRPGCS(1.0)QK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PPP1R3D 33300.2 1 5 2020.1 102.1 HUMAN 1 -11.5022 -6.9962 AADEDWDSELEDDLL-p Q96EV2;S41-p AADEDWDSELEDDLL 0.761476943047114 0.0087175975018043 -0.059 0.452666666666667 2.26732733333976 29.2033708044034 -0.059 0.452666666666667 0.593290325639447 0.00120133165142517 -0.567222177917586 6.18390084324309 Q96EV2 RBM33 Q96EV2.S41.p_RBM33 Q96EV2_S41s _1_1_41_41 Q96EV2 Q96EV2|A8MTF7|Q96EV2-2 RNA-binding protein 33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33730.33730.3 25.3 25.3 25.296 2 1 1 0 1067.8453 3121.5465 S41s Hydrogen 34 (R) AADEDWDsELEDDLLGEDLLSGKK (N) AADEDWDS(0.99)ELEDDLLGEDLLS(0.0)GKK K:TMT10-Lys-Only,s:Phosphorylated S RBM33 130268.8 18 2 662.1 251.2 HUMAN 1 -2.2673 29.2034 AADESPASEGEEEEL-p W4VSR2;S181-p AADESPASEGEEEEL 0.821402155666812 0.0667160080456445 0.0446666666666667 0.31 1.64390231265587 15.6373128077668 0.0446666666666666 0.31 0.684872564025572 0.0273066685725129 0.428413284969204 2.99679794732471 W4VSR2 MPND W4VSR2.S181.p_MPND W4VSR2_S181s _1_1_181_181 W4VSR2 W4VSR2|Q8N594|Q8N594-2|M0R044 MPN domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28697.28697.5 19.99 19.99 1.988 5 1 1 0 1015.465 4993.3672 S181s TMT10 165 (R) LHQLHTPATAADESPAsEGEEEELLMEEEEEDVLAGVSAEDK (S) LHQLHT(0.0)PAT(0.0)AADES(0.0)PAS(0.99)EGEEEELLMEEEEEDVLAGVS(0.0)AEDK K:TMT10,s:Phosphorylated S MPND 54672.5 1 3 3092.1 60.89 HUMAN 1 1.6439 15.6373 AADESVGSMAKRLSQ-p P09972;S39-p AADESVGSMAKRLSQ 0.299702423811655 0.00964250777774905 -0.153333333333333 0.532333333333333 9.83990014422607 28.4148408110662 -0.153333333333333 0.532333333333333 0.103755227161133 0.00144050881056244 -1.95390860515946 5.95517375547293 P09972 ALDOC P09972.S39.p_ALDOC P09972_S39s _1_1_39_39 P09972 P09972|A8MVZ9 Fructose-bisphosphate aldolase C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20826.20826.3 13.78 13.78 1.285 2 1 1 0 629.6613 1807.0036 S39s TMT10 29 (K) GILAADESVGsMAK (R) GILAADES(0.0)VGS(0.99)MAK K:TMT10,s:Phosphorylated S ALDOC 39854.5 1 12 1050.2 183.91 HUMAN 1 -9.8399 28.4148 AADILQLSSSLPLQS-p Q7Z6Z7;S2593-p AADILQLSSSLPLQS 0.220753787202438 0.19467439479798 -0.244333333333333 -0.155 12.630714020985 9.34484179323987 -0.244333333333333 -0.155 0.0545668140740268 0.116282891028982 -2.44473160352231 -1.86737469257001 Q7Z6Z7 HUWE1 Q7Z6Z7.S2593.p_HUWE1 Q7Z6Z7_S2593s _1_1_2593_2593 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35744.35948.3 27.79 27.79 1.127 5 1 1 0 849.4639 2466.4129 S2593s TMT10 2580 (R) LLGPSAAADILQLsSSLPLQSR (G) LLGPS(0.0)AAADILQLS(0.99)S(0.0)S(0.0)LPLQS(0.0)R s:Phosphorylated S HUWE1 485818.9 11 33 11.1 1210.45 HUMAN 1 -12.6307 -9.3448 AADKSQDSGSDNRIN-p O15516;S406-p AADKSQDSGSDNRIN 0.532768461565344 0.00880962755437148 -0.138 0.510333333333333 5.06049919986994 29.1314162722554 -0.138 0.510333333333333 0.311853110387804 0.00122140128557951 -1.1151334419716 6.16274876574886 O15516 CLOCK O15516.S406.p_CLOCK O15516_S406sS408s_2_2_406_408 O15516 O15516 Circadian locomoter output cycles protein kaput HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14348.14348.3 10.03 10.03 1.678 5 2 2 0 780.3758 2179.1719 S406s S408s TMT10 403 (K) SQDsGsDNRINTVSLK (E) S(0.0)QDS(0.99)GS(0.99)DNRINT(0.0)VS(0.0)LK K:TMT10,s:Phosphorylated S CLOCK 95815.6 1 4 4115.1 37.28 HUMAN 1 -5.0605 29.1314 AAEAVARSPKRPAWG-p Q9UKY4;S41-p AAEAVARSPKRPAWG 0.931562158604219 0.233145415078072 -0.016 0.151 0.610780856413049 8.32724852571004 -0.016 0.151 0.868804205259502 0.146985721129373 -0.173179372570153 1.69132783827017 Q9UKY4 POMT2 Q9UKY4.S41.p_POMT2 Q9UKY4_S41s _1_1_41_41 Q9UKY4 Q9UKY4|Q9UKY4-2 Protein O-mannosyl-transferase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8305.8305.3 8.25 4.7 1.287 2 1 1 0 778.4062 2253.2414 S41s Hydrogen 32 (R) DVAAEAVARsPKRPAWGSR (R) DVAAEAVARS(0.99)PKRPAWGS(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S POMT2 84725.8 2 1 6999.1 8.25 HUMAN 1 -0.6108 8.3272 AAEDDSASPPGAASD-p P10588;S34-p AAEDDSASPPGAASD 0.285446975514466 0.074145857917284 0.155666666666667 0.205333333333333 10.2747089906613 14.9962844727559 0.155666666666667 0.205333333333333 0.0938704934719798 0.0316498424677507 2.02947982300121 2.87587829100085 P10588 NR2F6 P10588.S34.p_NR2F6 P10588_S34sS40s_2_2_34_40 P10588 P10588 Nuclear receptor subfamily 2 group F member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19932.19932.3 16.32 16.32 2.063 3 2 2 0 1430.6102 4129.8967 S34s S40s TMT10 27 (R) AAEDDSAsPPGAAsDAEPGDEERPGLQVDCVVCGDK (S) AAEDDS(0.0)AS(0.99)PPGAAS(0.99)DAEPGDEERPGLQVDCVVCGDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NR2F6 43662.9 2 3 3618.1 46.82 HUMAN 1 10.2747 14.9963 AAEDIVASEQSLGQK-p P33991;S142-p AAEDIVASEQSLGQK 0.862721178211236 0.347637696622811 0.0273333333333333 0.108333333333333 1.2512380261134 6.08292190792823 0.0273333333333333 0.108333333333333 0.749680470420575 0.246438075836404 0.335763466164822 1.2990089529279 P33991 MCM4 P33991.S142.p_MCM4 P33991_S131sS142s_2_2_131_142 P33991 P33991 DNA replication licensing factor MCM4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27813.27813.3 13.6 13.6 2.522 3 2 2 0 1083.1893 3087.621 S131s S142s TMT10 124 (K) GLQVDLQsDGAAAEDIVAsEQSLGQK (L) GLQVDLQS(0.99)DGAAAEDIVAS(0.99)EQS(0.0)LGQK K:TMT10,s:Phosphorylated S MCM4 97126.8 2 11 1487.1 137.87 HUMAN 1 1.2512 6.0829 AAEEARESDWDGIIA-p Q8NI36;S455-p AAEEARESDWDGIIA 0.846999570571814 0.188411674756143 0.0323333333333333 0.130333333333333 1.39650119447982 9.53210120827169 0.0323333333333333 0.130333333333333 0.725019822388463 0.111375554479977 0.370578385479244 1.89979394156206 Q8NI36 WDR36 Q8NI36.S455.p_WDR36 Q8NI36_S455s _1_1_455_455 Q8NI36 Q8NI36|A0A0A0MTB8 WD repeat-containing protein 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20064.20064.5 23.89 23.89 99 1 1 1 0 586.4811 2848.4088 S455s TMT10 447 (K) FAAEEAREsDWDGIIACHQGK (L) FAAEEARES(1.0)DWDGIIACHQGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WDR36 106347.2 3 1 3972.1 39.98 HUMAN 1 1.3965 9.5321 AAEERRKSHEAEVLK-p P16949;S63-p AAEERRKSHEAEVLK 0.039271926938295 0.00613174143834937 -0.737 -0.561333333333333 31.7604754110543 31.8883139684033 -0.737 -0.561333333333333 0.000666733779578244 0.00064739390024938 -6.98615612956778 -7.01581352479851 P16949 STMN1 P16949.S63.p_STMN1 P16949_S63s _1_1_63_63 P16949 P16949-2 Stathmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9131.9131.3 13.78 8.58 99 1 1 1 0 484.2623 1370.8044 S63s TMT10 63 (K) sHEAEVLK (Q) S(1.0)HEAEVLK K:TMT10,s:Phosphorylated S STMN1 17302.2 19 8 690.1 243.18 HUMAN 1 -31.7605 -31.8883 AAEETAVSPRKSPRP-p Q9BUH6;S148-p AAEETAVSPRKSPRP 0.940761265403451 0.278474819116095 0.014 -0.123333333333333 0.520889152623928 7.31449942723485 0.014 -0.123333333333333 0.886974398781266 0.185588070802994 0.14896656859648 -1.5155223680734 Q9BUH6 C9orf142 Q9BUH6.S148.p_C9orf142 Q9BUH6_S148s _1_1_148_148 Q9BUH6 Q9BUH6 Protein PAXX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6055.6055.2 16.16 16.16 2.677 2 1 1 0 647.8068 1214.6375 S148s Hydrogen 139 (R) LAAAEETAVsPR (K) LAAAEET(0.0)AVS(0.99)PR s:Phosphorylated S PAXX 21981.5 33 3 602.1 263.13 HUMAN 1 0.5209 -7.3145 AAEISLKSPRELPSA-p Q5T481;S980-p AAEISLKSPRELPSA 0.951730353840408 0.139364266590386 -0.00933333333333333 0.151666666666667 0.425982685086716 11.2761354688886 -0.00933333333333333 0.151666666666667 0.906570810143863 0.0745394962012421 -0.122967767234039 2.20353607511675 Q5T481 RBM20 Q5T481.S980.p_RBM20 Q5T481_S980s _1_1_980_980 Q5T481 Q5T481 RNA-binding protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14428.14428.3 14.25 9.27 1.128 2 1 1 0 670.0388 1928.1329 S980s TMT10 968 (K) AVGNGAAEISLKsPR (E) AVGNGAAEIS(0.0)LKS(0.99)PR K:TMT10,s:Phosphorylated S RBM20 135496 6 7 522.1 283.33 HUMAN 1 -0.426 11.2761 AAELEEASAESEDEM-p Q9UKV3;S166-p AAELEEASAESEDEM 0.2734486714236 0.0535109807374126 0.156333333333333 0.239 10.6609283665427 16.9550026634485 0.156163489641871 0.239 0.0858829914709523 0.0201604273426192 2.09680749163024 3.25130816736761 Q9UKV3 ACIN1 Q9UKV3.S166.p_ACIN1 Q9UKV3_S166sS169s_2_2_166_169 Q9UKV3 Q9UKV3|Q9UKV3-5|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34036.34036.5 26.37 19.72 5.984 6 2 2 0 1026.072 4966.3989 S166s S169s TMT10 158 (R) EAAELEEAsAEsEDEMIHPEGVASLLPPDFQSSLERPELELSR (H) EAAELEEAS(0.99)AES(0.99)EDEMIHPEGVAS(0.0)LLPPDFQS(0.0)S(0.0)LERPELELS(0.0)R s:Phosphorylated S ACIN1 152258.2 6 41 32.2 899.18 HUMAN 1 10.6609 16.955 AAELGPASPRRAGAL-p Q9BX95;S101-p AAELGPASPRRAGAL 0.792858799068625 0.00994130061946245 0.0506666666666667 -0.707 1.94397186545949 28.1507489210703 0.0506666666666667 -0.707 0.63915002972522 0.00153082345538088 0.496358145236487 -5.88005644813945 Q9BX95 SGPP1 Q9BX95.S101.p_SGPP1 Q9BX95_S101s _1_1_101_101 Q9BX95 Q9BX95 Sphingosine-1-phosphate phosphatase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15097.15097.3 18.01 18.01 99 1 1 1 0 521.2702 1481.8274 S101s TMT10 91 (R) NGLAAELGPAsPR (R) NGLAAELGPAS(1.0)PR s:Phosphorylated S SGPP1 49734.4 2 1 3634.1 46.49 HUMAN 1 1.944 -28.1507 AAEPGAGSQHLEVRD-p Q14566;S13-p AAEPGAGSQHLEVRD 0.332351702929816 0.769828622510024 0.135666666666667 0.0303333333333333 8.93285091440771 1.56982231127742 0.135666666666667 0.0303333333333333 0.127854173334976 0.696655016708164 1.79673893102769 0.411234135221995 Q14566 MCM6 Q14566.S13.p_MCM6 Q14566_S13s _1_1_13_13 Q14566 Q14566 DNA replication licensing factor MCM6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20952.20952.4 21.95 18.27 99 1 1 1 0 737.1032 2865.425 S13s Acetyl 1 (-) MDLAAAAEPGAGsQHLEVRDEVAEK (C) MDLAAAAEPGAGS(1.0)QHLEVRDEVAEK K:TMT10,s:Phosphorylated S MCM6 93857.5 5 1 1039.1 185.36 HUMAN 1 8.9329 1.5698 AAEPHFGTLPKALTK-p Q8IVT5;T425-p AAEPHFGTLPKALTK 0.72251740159762 0.832838827039107 0.05 -0.0323333333333333 2.67060326332267 1.11247114405612 0.05 -0.0323333333333333 0.540679213864669 0.774021252879326 0.652675471791106 -0.301827264733186 Q8IVT5 KSR1 Q8IVT5.T425.p_KSR1 Q8IVT5_T425t _1_1_425_425 Q8IVT5 Q8IVT5|Q8IVT5-2|A0A0A0MQW1 Kinase suppressor of Ras 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15898.15898.3 17.35 17.35 99 1 1 1 0 569.3076 1625.9415 T425t TMT10 418 (R) AAEPHFGtLPK (A) AAEPHFGT(1.0)LPK K:TMT10,t:Phosphorylated T KSR1 103356.3 1 3 3797.1 42.93 HUMAN 1 2.6706 -1.1125 AAEPRMDTPEDQDLP-p F5H2X7;T255-p AAEPRMDTPEDQDLP 0.954281670594289 0.0314150697978548 0.00866666666666666 0.278 0.39857813088492 20.3026456344688 0.00866666666666666 0.278 0.912309478274958 0.00932685954213226 0.115373675285104 3.94044585253965 F5H2X7 CIZ1 F5H2X7.T255.p_CIZ1 F5H2X7_T255t _1_1_255_255 F5H2X7 F5H2X7|Q9ULV3|Q5SYW2|Q9ULV3-2|Q9ULV3-4|Q9BTG3|Q9ULV3-3|Q9ULV3-5 Cip1-interacting zinc finger protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19235.19235.3 12.98 12.98 99 1 1 1 0 794.0158 2300.0624 T255t Hydrogen 253 (R) MDtPEDQDLPPCPEDIAK (E) MDT(1.0)PEDQDLPPCPEDIAK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T CIZ1 107380.6 2 3 497.1 292.98 HUMAN 1 0.3986 20.3026 AAEQAKASPALVAKD-p Q92783;S156-p AAEQAKASPALVAKD 0.548510054717454 0.0233997153972448 -0.123333333333333 0.335666666666667 4.81337169767442 22.2463435540761 -0.123333333333333 0.335666666666667 0.330113154190052 0.00596163859214329 -1.06974384732537 4.37379819100782 Q92783 STAM Q92783.S156.p_STAM Q92783_S156s _1_1_156_156 Q92783 Q92783|Q92783-2 Signal transducing adapter molecule 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23854.23854.4 20.32 20.32 3.806 3 1 1 0 834.957 3256.8508 S156s TMT10 137 (K) EQGVTFPAIGSQAAEQAKAsPALVAK (D) EQGVT(0.0)FPAIGS(0.0)QAAEQAKAS(0.99)PALVAK K:TMT10,s:Phosphorylated S STAM 59577.9 3 2 3612.1 47.01 HUMAN 1 -4.8134 22.2463 AAERPGGTPTPVIAY-p Q9P1Z0;T795-p AAERPGGTPTPVIAY 0.289480631969882 0.0589606781369833 0.153666666666667 0.248666666666667 10.1532106515699 16.3791669603343 0.153666666666667 0.248666666666667 0.0965336960971471 0.0230188330959559 2.00834140555468 3.1390535740919 Q9P1Z0 ZBTB4 Q9P1Z0.T795.p_ZBTB4 Q9P1Z0_T795t _1_1_795_795 Q9P1Z0 Q9P1Z0 Zinc finger and BTB domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11197.11197.3 12.99 8.66 1.179 4 1 1 0 797.4262 2310.297 T795t TMT10 787 (R) HAAERPGGtPTPVIAYSK (G) HAAERPGGT(0.99)PT(0.0)PVIAY(0.0)S(0.0)K K:TMT10,t:Phosphorylated T ZBTB4 106081.6 4 4 2994.1 63.81 HUMAN 1 10.1532 16.3792 AAFAQFGSDLDAATQ-p P25705;S451-p AAFAQFGSDLDAATQ 0.50155645324426 0.0250501705144135 0.196666666666667 0.37 5.52685216355959 21.7867279956573 0.196666666666667 0.37 0.280101080184388 0.00662715610138278 1.19979052694137 4.2688712249112 P25705 ATP5A1 P25705.S451.p_ATP5A1 P25705_S451s _1_1_451_451 P25705 P25705|P25705-3|P25705-2 ATP synthase subunit alpha, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37171.37171.3 21.64 21.64 7.619 3 1 1 0 883.1099 2567.3303 S451s TMT10 442 (R) EVAAFAQFGsDLDAATQQLLSR (G) EVAAFAQFGS(0.99)DLDAAT(0.0)QQLLS(0.0)R s:Phosphorylated S ATP5A1 59863.7 1 6 1547.1 132.65 HUMAN 1 5.5269 21.7867 AAFQEDSSGDEAESP-p Q15311;S93-p AAFQEDSSGDEAESP 0.711237004524916 0.966502502242138 0.0508333333333333 -0.00466666666666667 2.78136037214521 0.210409897321906 0.0508333333333333 -0.00466666666666668 0.527064739247014 0.952706241129772 0.675643157261682 -0.062102527009259 Q15311 RALBP1 Q15311.S93.p_RALBP1 Q15311_S92sS93s_2_2_92_93 Q15311 Q15311|A0A1W2PRI7 RalA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17788.17788.3 20.36 20.36 5.426 6 2 2 0 941.7276 2663.2361 S92s S93s TMT10 82 (R) TEGYAAFQEDssGDEAESPSK (M) T(0.0)EGY(0.0)AAFQEDS(0.99)S(0.99)GDEAES(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S RALBP1 76461.4 9 11 822.1 218.43 HUMAN 2 2.7814 -0.2104 AAGAAAASGGEEGVG-p Q8IYI6;S118-p AAGAAAASGGEEGVG 0.36262235272653 0.122241979077937 0.194 0.185 8.18478417946426 12.0380389890737 0.194 0.185 0.151887341983407 0.0625455046653335 1.66720137902886 2.33791257435854 Q8IYI6 EXOC8 Q8IYI6.S118.p_EXOC8 Q8IYI6_S118s _1_1_118_118 Q8IYI6 Q8IYI6 Exocyst complex component 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30240.30240.5 17.21 17.21 1.896 5 1 1 0 774.1989 3786.9936 S118s TMT10 96 (K) SSLESIPLTLLPAAAAAGAAAAsGGEEGVGGAGGRDHLR (G) S(0.0)S(0.0)LES(0.0)IPLT(0.0)LLPAAAAAGAAAAS(0.99)GGEEGVGGAGGRDHLR s:Phosphorylated S EXOC8 82482.3 3 2 1770.1 116.15 HUMAN 1 8.1848 12.038 AAGAGKVTKSAQKAQ-p Q5VTE0;T452-p AAGAGKVTKSAQKAQ 0.105961047054891 0.0165542883561627 0.337333333333333 0.435333333333333 20.5235817713726 24.5991197037739 0.337333333333333 0.435333333333333 0.00886424646532018 0.00346807139643443 3.99222858170922 4.93692390312539 Q5VTE0 NotFound Q5VTE0.T452.p_NotFound Q5VTE0_T452t _1_1_452_452 Q5VTE0 P68104|Q5VTE0|P68104-2 Putative elongation factor 1-alpha-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7338.7338.3 8.01 8.01 99 1 1 1 0 523.9832 1489.9669 T452t TMT10 445 (K) AAGAGKVtK (S) AAGAGKVT(1.0)K K:TMT10,t:Phosphorylated T EEF1A1P5 50526.4 1 10 1898.1 108.38 HUMAN 1 20.5236 24.5991 AAGDPQGSEEKLSCF-p Q13796;S261-p AAGDPQGSEEKLSCF 0.49414153350986 0.00785957634304923 -0.183666666666667 0.479666666666667 5.637077799475 30.0198020734406 -0.183666666666667 0.479666666666667 0.273081462489366 0.000995450783265037 -1.21963124048567 6.4279530837755 Q13796 SHROOM2 Q13796.S261.p_SHROOM2 Q13796_S261s _1_1_261_261 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6248.6248.2 17.94 13.56 99 1 1 1 0 977.4695 1873.9656 S261s TMT10 251 (R) QAQAAGDPQGsEEK (L) QAQAAGDPQGS(1.0)EEK K:TMT10,s:Phosphorylated S SHROOM2 177605.1 1 5 90.1 622.62 HUMAN 1 -5.6371 30.0198 AAGEQRASPSKARLK-p A8K0R7-5;S464-p AAGEQRASPSKARLK 0.762785371268681 0.071283263938994 -0.0493333333333333 -0.229333333333333 2.25339965450874 15.2493434110382 -0.0493333333333333 -0.229333333333333 0.595196042028558 0.0298583399869314 -0.56421562967651 -2.92340121149012 A8K0R7 ZNF839 A8K0R7.5.S464.p_ZNF839 A8K0R7-5_S464s _1_1_464_464 A8K0R7-5 A8K0R7-5|A8K0R7-2 Isoform 3 of Zinc finger protein 839 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10614.10614.4 13.77 13.77 1.384 2 1 1 0 601.3203 2322.293 S464s TMT10 448 (R) AAQLPGGPAAAGEQRAsPSK (A) AAQLPGGPAAAGEQRAS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S ZNF839 100640.4 7 2 2399.1 85.2 HUMAN 1 -2.2534 -15.2493 AAGERLVSPAYVRQG-p Q9HD40;S14-p AAGERLVSPAYVRQG 0.694547639896398 0.0712892721299934 -0.0833333333333333 0.222333333333333 2.97093386267108 15.2485459080543 -0.0833333333333334 0.222333333333333 0.50455279199864 0.0298638234325404 -0.714502430895252 2.9232510162721 Q9HD40 SEPSECS Q9HD40.S14.p_SEPSECS Q9HD40_S14s _1_1_14_14 Q9HD40 Q9HD40|J3KP25|Q9HD40-2 O-phosphoseryl-tRNA(Sec) selenium transferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16143.16143.2 10.44 4.59 3.726 2 1 1 0 607.331 1133.688 S14s TMT10 12 (R) LVsPAYVR (Q) LVS(0.99)PAY(0.0)VR s:Phosphorylated S SEPSECS 56467 1 1 6633.1 10.44 HUMAN 1 -2.9709 15.2485 AAGGGAGSPPAPLAP-p Q96HB5-4;S411-p AAGGGAGSPPAPLAP 0.547885296654045 0.391376670293028 -0.0836666666666667 -0.0956666666666666 4.8245442834109 5.41642182535967 -0.0822295277389083 -0.0956666666666667 0.32926500216089 0.287314680759458 -1.07180463495009 -1.17959621521122 Q96HB5 CCDC120 Q96HB5.4.S411.p_CCDC120 Q96HB5-4_S411s _1_1_411_411 Q96HB5-4 Q96HB5-4|Q96HB5-3|Q96HB5-5|Q96HB5-2 Isoform 4 of Coiled-coil domain-containing protein 120 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17943.17943.3 18.52 18.52 5.001 3 1 1 0 871.4484 2532.3645 S411s TMT10 404 (R) AAGGGAGsPPAPLAPSASGPPVCK (S) AAGGGAGS(0.99)PPAPLAPS(0.0)AS(0.0)GPPVCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCDC120 75538.7 2 7 1058.1 182.62 HUMAN 1 -4.8245 -5.4164 AAGGGAGSSEDDAQS-p Q9H4A6;S35-p AAGGGAGSSEDDAQS 0.181399305482146 0.13593628768413 0.298 -0.234333333333333 14.6063172502216 11.4196445285293 0.298 -0.234333333333333 0.0346232853461306 0.0721166504484301 2.80493656696632 -2.22874848568538 Q9H4A6 GOLPH3 Q9H4A6.S35.p_GOLPH3 Q9H4A6_S35sS36s_2_2_35_36 Q9H4A6 Q9H4A6|D6REM1 Golgi phosphoprotein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3603.3603.3 13.81 13.81 7.533 3 2 2 0 608.9055 1664.7673 S35s S36s TMT10 28 (R) AAGGGAGssEDDAQSR (R) AAGGGAGS(0.99)S(0.99)EDDAQS(0.0)R s:Phosphorylated S GOLPH3 34095.2 3 3 3751.1 43.88 HUMAN 1 14.6063 -11.4196 AAGGGAKSRPLANGH-p Q96G23;S362-p AAGGGAKSRPLANGH 0.621867421925022 0.0917884405899169 -0.129333333333333 0.203 3.83460983183076 13.7180386505247 -0.129333333333333 0.203 0.413560466761223 0.0424811372841344 -0.885380129445982 2.63974925061007 Q96G23 CERS2 Q96G23.S362.p_CERS2 Q96G23_S362s _1_1_362_362 Q96G23 Q96G23 Ceramide synthase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5450.5450.3 8.5 4.09 99 1 1 1 0 707.0309 2039.1209 S362s TMT10 362 (K) sRPLANGHPILNNNHR (K) S(1.0)RPLANGHPILNNNHR s:Phosphorylated S CERS2 44989.4 1 2 6114.1 13.9 HUMAN 1 -3.8346 13.718 AAGPLDMSLPSTPDI-p P17544-6;S97-p AAGPLDMSLPSTPDI 0.322409753465923 0.506222070671865 0.167666666666667 0.084 9.20334178649314 3.96157811855262 0.167666666666667 0.0840000000000001 0.120133967829449 0.401644836545803 1.84356816714092 0.909625098059808 P17544 ATF7 P17544.6.S97.p_ATF7 P17544-6_S97s _1_1_97_97 P17544-6 P17544-6|K7ELQ4|P17544-2|P17544-4 Isoform 6 of Cyclic AMP-dependent transcription factor ATF-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24567.24567.3 23.59 19.49 3.746 3 1 1 0 860.4767 2499.446 S97s TMT10 88 (K) KAAAGPLDMsLPSTPDIK (I) KAAAGPLDMS(0.99)LPS(0.0)T(0.0)PDIK K:TMT10,s:Phosphorylated S ATF7 52155.3 3 3 758.1 230.62 HUMAN 1 9.2033 3.9616 AAGRAEGSEAAELAE-p Q9NUQ8;S283-p AAGRAEGSEAAELAE 0.656739573746511 0.077598631942524 0.0876666666666667 -0.202 3.42765709127125 14.7255568726296 0.0876666666666667 -0.202 0.454186572722496 0.0336856019723029 0.806012752244132 -2.82533344953247 Q9NUQ8 ABCF3 Q9NUQ8.S283.p_ABCF3 Q9NUQ8_S283s _1_1_283_283 Q9NUQ8 Q9NUQ8 ATP-binding cassette sub-family F member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34460.34460.4 19.48 12.33 19.478 2 1 1 0 911.2263 3561.9255 S283s TMT10 280 (R) AEGsEAAELAEIYAKLEEIEADKAPAR (A) AEGS(0.99)EAAELAEIY(0.0)AKLEEIEADKAPAR K:TMT10,s:Phosphorylated S ABCF3 80142.6 1 4 2013.1 102.38 HUMAN 1 3.4277 -14.7256 AAGRPFNTYPRADTD-p O96013;T207-p AAGRPFNTYPRADTD 0.135772862586622 0.0443246480470408 -0.281666666666667 -0.305666666666667 17.7844946152853 18.1193607634563 -0.281666666666667 -0.305666666666667 0.0166552263192977 0.0154192739200638 -3.41878177772731 -3.4835861931457 O96013 PAK4 O96013.T207.p_PAK4 O96013_T207t _1_1_207_207 O96013 O96013 Serine/threonine-protein kinase PAK 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13430.13430.3 12.12 12.12 6.776 2 1 1 0 557.9572 1591.8906 T207t TMT10 199 (K) LAAGRPFNtYPR (A) LAAGRPFNT(0.99)Y(0.0)PR t:Phosphorylated T PAK4 64356.2 5 6 573.1 269.06 HUMAN 1 -17.7845 -18.1194 AAGSLDRSRNLEEAA-p Q9Y2U8;S331-p AAGSLDRSRNLEEAA 0.115326898611344 0.00555202927673115 0.374666666666667 -0.673333333333333 19.5131702873223 32.693009738813 0.374666666666667 -0.673333333333333 0.0111862100808523 0.000537896881111578 3.7752416510797 -7.28227765808125 Q9Y2U8 LEMD3 Q9Y2U8.S331.p_LEMD3 Q9Y2U8_S331s _1_1_331_331 Q9Y2U8 Q9Y2U8 Inner nuclear membrane protein Man1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13348.13348.4 19.56 19.56 1.354 4 1 1 0 956.1995 3741.8048 S331s TMT10 322 (R) AAAAGSLDRsRNLEEAAAAEQGGGCDQVDSSPVPR (Y) AAAAGS(0.0)LDRS(0.99)RNLEEAAAAEQGGGCDQVDS(0.0)S(0.0)PVPR C:Carbamidomethylation,s:Phosphorylated S LEMD3 100851.5 3 10 412.1 321.94 HUMAN 1 19.5132 -32.693 AAGSPVPTPPRSPAQ-p Q9HB09;T117-p AAGSPVPTPPRSPAQ 0.150283451076775 0.320953974553393 0.263 -0.101333333333333 16.5789913647294 6.52565809115618 0.263 -0.101333333333333 0.0219837037810479 0.222553378168406 3.18016731809107 -1.37734397020603 Q9HB09 BCL2L12 Q9HB09.T117.p_BCL2L12 Q9HB09_T117t _1_1_117_117 Q9HB09 Q9HB09|I6LJZ7|A0A087WSV0 Bcl-2-like protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16339.16339.4 12.32 12.32 1.955 5 1 1 0 790.3972 3078.5806 T117t TMT10 107 (R) RGEAAGSPVPtPPRSPAQEEPTDFLSR (L) RGEAAGS(0.0)PVPT(0.99)PPRS(0.0)PAQEEPT(0.0)DFLS(0.0)R t:Phosphorylated T BCL2L12 37277.2 1 2 1874.1 109.69 HUMAN 1 16.579 -6.5257 AAGYPDPYSRASLSL-p A0A087X1U6;Y1331-p AAGYPDPYSRASLSL 0.167787448802573 0.14444812960562 0.320333333333333 -0.450666666666667 15.4825384090409 11.0681324643454 0.320333333333333 -0.450666666666667 0.0282973755824245 0.0781963989308715 2.96945111896124 -2.16706589904091 A0A087X1U6 EPPK1 A0A087X1U6.Y1331.p_EPPK1 A0A087X1U6_Y1331y _1_1_1331_1331 A0A087X1U6 P58107|A0A087X1U6 Epiplakin GG20160819_MSz_CCLE_T4D7_pY_Injection_01.9592.9592.2 13.57 10.39 2.149 3 1 1 0 738.8388 1396.7058 Y1331y TMT10 1323 (R) AAAGYPDPySR (A) AAAGY(0.0)PDPY(0.99)S(0.0)R y:Phosphorylated Y EPPK1 558101.4 1 2 164.1 20.61 HUMAN 1 15.4825 -11.0681 AAHKRKISPVKFSNT-p Q9NUW8;S61-p AAHKRKISPVKFSNT 0.22320926423064 0.810184831093937 -0.506333333333333 -0.0293333333333333 12.5222541849584 1.28132851942759 -0.506333333333333 -0.0293333333333333 0.0559467137349251 0.744504193074419 -2.42532541747951 -0.342995312516113 Q9NUW8 TDP1 Q9NUW8.S61.p_TDP1 Q9NUW8_S61s _1_1_61_61 Q9NUW8 Q9NUW8|E7EPD8|G3V2F4|Q9BRS7|G3V5H9|G3V4W8 Tyrosyl-DNA phosphodiesterase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7065.7065.3 7.11 7.11 99 1 1 1 0 532.3391 1515.0349 S61s TMT10 58 (K) RKIsPVK (F) RKIS(1.0)PVK K:TMT10,s:Phosphorylated S TDP1 68818.5 1 5 1900.1 108.34 HUMAN 1 -12.5223 -1.2813 AAHVPENSDTEQDVL-p Q9H2Y7;S1370-p AAHVPENSDTEQDVL 0.253511778541442 0.00610722006685881 -0.175333333333333 -0.645666666666667 11.3568268873797 31.9228057288782 -0.175333333333333 -0.645666666666667 0.0731673475350967 0.000642272647539733 -2.21874462646719 -7.02706580649215 Q9H2Y7 ZNF106 Q9H2Y7.S1370.p_ZNF106 Q9H2Y7_S1370s _1_1_1370_1370 Q9H2Y7 Q9H2Y7|Q9H2Y7-2|A0A0C4DGM5 Zinc finger protein 106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14568.14568.5 24.36 24.36 3.462 3 1 1 0 640.9525 3120.762 S1370s TMT10 1363 (R) AAHVPENsDTEQDVLTVKPVRK (V) AAHVPENS(0.99)DT(0.0)EQDVLT(0.0)VKPVRK K:TMT10,s:Phosphorylated S ZNF106 210818.9 8 11 170.1 490.3 HUMAN 1 -11.3568 -31.9228 AAILHGGSPDFVGNG-p Q9P2K8;S230-p AAILHGGSPDFVGNG 0.40434341706313 0.012621021536134 -0.131333333333333 -0.541333333333333 7.26219710560239 26.4779172745146 -0.131333333333333 -0.541333333333334 0.187836630662982 0.00225013343296841 -1.50683587180703 -5.42079925482268 Q9P2K8 EIF2AK4 Q9P2K8.S230.p_EIF2AK4 Q9P2K8_S230s_1_1_230_230 Q9P2K8 Q9P2K8|Q9P2K8-2|Q9P2K8-3 eIF-2-alpha kinase GCN2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18193.18193.3 23.29 23.29 12.213 2 1 1 0 727.3779 2099.165 S230s N236n TMT10 222 (R) TAAILHGGsPDFVGnGK (H) T(0.0)AAILHGGS(0.99)PDFVGN(1.0)GK K:TMT10,s:Phosphorylated S,n:Deamidated EIF2AK4 188390.5 7 1 1647.1 123.7 HUMAN 1 -7.2622 -26.4779 AAISQLRSPRVKESI-p O95747;S359-p AAISQLRSPRVKESI 0.195231770437197 0.00714231278100688 0.198333333333333 -0.490333333333333 13.836069718023 30.7149108918858 0.198333333333333 -0.490333333333333 0.0413421471269514 0.000848220785984434 2.66286967763451 -6.64176103751355 O95747 OXSR1 O95747.S359.p_OXSR1 O95747_S359s _1_1_359_359 O95747 O95747|C9JIG9 Serine/threonine-protein kinase OSR1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8303.8303.3 11.88 8.28 4.491 2 1 1 0 469.9268 1327.8007 S359s TMT10 352 (K) AAISQLRsPR (V) AAIS(0.0)QLRS(0.99)PR s:Phosphorylated S OXSR1 58306.4 2 5 1176.1 169.76 HUMAN 1 13.8361 -30.7149 AAIWLGDSLGSMTQK-p O15013;S1271-p AAIWLGDSLGSMTQK 0.0775649771385732 0.159402616009271 -0.493666666666667 -0.155333333333333 23.7538237331864 10.4902806743829 -0.493666666666667 -0.155333333333333 0.00421325385362485 0.0893247753351261 -4.73492593312978 -2.06615067831353 O15013 ARHGEF10 O15013.S1271.p_ARHGEF10 O15013_S1271s _1_1_1271_1271 O15013 O15013|O15013-6|O15013-5|O15013-4|O15013-7 Rho guanine nucleotide exchange factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30379.30379.4 23.07 23.07 1.103 7 1 1 0 932.7041 3647.8263 S1271s TMT10 1246 (K) DALPSGGAGSSLSQGDPDAAIWLGDsLGSMTQK (S) DALPS(0.0)GGAGS(0.0)S(0.0)LS(0.0)QGDPDAAIWLGDS(0.99)LGS(0.0)MT(0.0)QK K:TMT10,s:Phosphorylated S ARHGEF10 152807 1 4 2315.1 88.25 HUMAN 1 -23.7538 -10.4903 AAKDLTQSPEVSPTT-p Q9BWL3;S211-p AAKDLTQSPEVSPTT 0.832987870919974 0.018686426376418 0.0296666666666667 -0.376 1.53143153957578 23.7812324620202 0.0296666666666667 -0.376 0.702840608445784 0.00418674734703453 0.40233839044341 -4.73603754869477 Q9BWL3 C1orf43 Q9BWL3.S211.p_C1orf43 Q9BWL3_S211s _1_1_211_211 Q9BWL3 Q9BWL3|X6R6S3|Q9BWL3-2|Q9BWL3-4 Uncharacterized protein C1orf43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25669.25669.3 18.75 13.06 2.12 9 1 1 0 1019.8681 2977.6134 S211s TMT10 207 (K) DLTQsPEVSPTTIQVTYLPSSQK (S) DLT(0.0)QS(0.99)PEVS(0.0)PT(0.0)T(0.0)IQVT(0.0)Y(0.0)LPS(0.0)S(0.0)QK K:TMT10,s:Phosphorylated S C1orf43 28835.4 1 1 5501.1 18.75 HUMAN 1 1.5314 -23.7812 AAKEPSATPPISNLT-p P30622;T182-p AAKEPSATPPISNLT 0.39120743112417 0.0683654163750635 -0.167333333333333 -0.232333333333333 7.51652865157524 15.502201737182 -0.167333333333333 -0.232333333333333 0.177152438531296 0.0281695446139874 -1.55115968961347 -2.97116198839284 P30622 CLIP1 P30622.T182.p_CLIP1 P30622_T182t _1_1_182_182 P30622 P30622|P30622-1 CAP-Gly domain-containing linker protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18287.18287.3 12.81 12.81 2.215 4 1 1 0 631.6777 1813.0471 T182t TMT10 178 (K) EPSAtPPISNLTK (T) EPS(0.0)AT(0.99)PPIS(0.0)NLT(0.0)K K:TMT10,t:Phosphorylated T CLIP1 162985.2 2 4 372.1 339.16 HUMAN 1 -7.5165 -15.5022 AAKFTGLSKEELLKV-p P08195-2;S64-p AAKFTGLSKEELLKV 0.580127954969095 0.00357603011858158 -0.239 0.648666666666667 4.34985026339395 36.4520531544276 -0.239 0.648666666666667 0.367294963922446 0.000226357393581197 -0.983440474316432 8.64444775370226 P08195 SLC3A2 P08195.2.S64.p_SLC3A2 P08195-2_S64s _1_1_64_64 P08195-2 P08195-4|J3KPF3|F5GZS6|P08195-3|P08195-2 Isoform 2 of 4F2 cell-surface antigen heavy chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24081.24081.2 15.79 10.19 3.298 2 1 1 0 1016.5862 1952.2035 S64s TMT10 60 (K) FTGLsKEELLK (V) FT(0.0)GLS(0.99)KEELLK K:TMT10,s:Phosphorylated S SLC3A2 58058 3 5 1865.1 110.46 HUMAN 1 -4.3499 36.4521 AAKKQARSLQAVPRL-p Q9Y446-2;S374-p AAKKQARSLQAVPRL 0.968781026450892 0.721825047507294 -0.00766666666666668 0.0343333333333334 0.270220172304036 1.9508790019866 -0.00766666666666669 0.0343333333333334 0.939675671045701 0.638134316209474 -0.0792584075470401 0.497838870480925 Q9Y446 PKP3 Q9Y446.2.S374.p_PKP3 Q9Y446-2_S374s _1_1_374_374 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9986.9986.2 10.82 10.82 99 1 1 1 0 540.2939 999.6148 S374s TMT10 374 (R) sLQAVPR (L) S(1.0)LQAVPR s:Phosphorylated S PKP3 89109.7 1 14 454.1 307.47 HUMAN 1 -0.2702 1.9509 AAKKTKKSLESINSR-p P62888;S10-p AAKKTKKSLESINSR 0.140572716144199 0.551560445095352 -0.596333333333333 0.0823333333333334 17.4419718066086 3.47995822293081 -0.596333333333333 0.0823333333333334 0.0180219931108638 0.448749706671694 -3.3501983541631 0.816193991291105 P62888 RPL30 P62888.S10.p_RPL30 P62888_S10s _1_1_10_10 P62888 P62888|A0A0C4DH44|E5RJH3 60S ribosomal protein L30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9924.9924.2 13.39 13.39 5.243 3 1 1 0 607.8024 1134.6316 S10s TMT10 10 (K) sLESINSR (L) S(0.99)LES(0.0)INS(0.0)R s:Phosphorylated S RPL30 12955 1 1 4915.1 25.12 HUMAN 1 -17.442 3.48 AAKLFPGSPAIYKLK-p P49792;S128-p AAKLFPGSPAIYKLK 0.933478830757631 0.810389796710114 -0.0296666666666667 -0.0466666666666667 0.5881186514801 1.28003327511132 -0.0296666666666667 -0.0466666666666667 0.873349618456832 0.744726267882672 -0.167111773692756 -0.342683149291468 P49792 RANBP2 P49792.S128.p_RANBP2 P49792_S128s _1_1_128_128 P49792 A0A286YES2|F8VYC4|P0DJD1|A0A1W2PNU4|P0DJD0|J3KQ37|P49792|Q99666|O14715|J3KNE0|A6NKT7|Q7Z3J3 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26034.26034.2 13.32 10.47 8.346 2 1 1 0 815.9549 1550.9347 S128s TMT10 124 (K) LFPGsPAIYK (L) LFPGS(0.99)PAIY(0.0)K K:TMT10,s:Phosphorylated S RANBP2 362585.9 4 5 9.1 1298.62 HUMAN 1 -0.5881 -1.28 AAKLSEGSQPAEEEE-p Q9UKV3;S243-p AAKLSEGSQPAEEEE 0.0241132206334896 0.0609926566690015 -0.702333333333333 -0.234666666666667 37.5257279689678 16.179631779238 -0.702333333333334 -0.234666666666667 0.000176777587645109 0.0241010976350314 -9.09158109062476 -3.1005364914464 Q9UKV3 ACIN1 Q9UKV3.S243.p_ACIN1 Q9UKV3_S243s _1_1_243_243 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9515.9515.3 19.48 19.48 3.261 4 1 1 0 809.6869 2347.0735 S243s TMT10 239 (K) LSEGsQPAEEEEDQETPSR (N) LS(0.0)EGS(0.99)QPAEEEEDQET(0.0)PS(0.0)R s:Phosphorylated S ACIN1 152258.2 4 4 32.2 899.18 HUMAN 1 -37.5257 -16.1796 AAKLSYASAESLETM-p A0A087X165;S174-p AAKLSYASAESLETM 0.37139168699051 0.303196813245135 0.202333333333333 0.132666666666667 7.97783326920698 6.84246668422617 0.202333333333333 0.132666666666667 0.159300329123593 0.206896589403657 1.63131502525963 1.43302165910864 A0A087X165 NotFound A0A087X165.S174.p_NotFound A0A087X165_S174s _1_1_174_174 A0A087X165 A0A087X165|Q9C0H9-5 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.33759.33759.2 18.41 18.41 1.352 7 1 1 0 1399.1597 2717.3541 S174s TMT10 170 (K) LSYAsAESLETMSEAELPLGFSR (M) LS(0.0)Y(0.0)AS(0.99)AES(0.0)LET(0.0)MS(0.0)EAELPLGFS(0.0)R s:Phosphorylated S SRCIN1 130745.5 3 4 98.1 603.22 HUMAN 1 7.9778 6.8425 AAKQEARSDKSPDLA-p Q9BY44;S503-p AAKQEARSDKSPDLA 0.472422836600032 0.142976423871544 0.183333333333333 -0.157666666666667 6.00372598090005 11.13123941371 0.183333333333333 -0.157666666666667 0.250973231084338 0.0770683495741483 1.28522731644815 -2.17812194166315 Q9BY44 EIF2A Q9BY44.S503.p_EIF2A Q9BY44_S503s _1_1_503_503 Q9BY44 Q9BY44|F8WAE5|Q9BY44-3|Q9BY44-4|Q9BY44-2 Eukaryotic translation initiation factor 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8530.8530.4 10.35 10.35 1.201 5 1 1 0 847.4539 3306.8373 S503s TMT10 496 (K) AAKQEARsDKSPDLAPTPAPQSTPR (N) AAKQEARS(0.99)DKS(0.0)PDLAPT(0.0)PAPQS(0.0)T(0.0)PR K:TMT10,s:Phosphorylated S EIF2A 65559.4 6 5 1639.1 124.84 HUMAN 1 6.0037 -11.1312 AAKRGNLSWLRECLD-p Q92882;S87-p AAKRGNLSWLRECLD 0.874281580876972 0.0875883248002472 -0.038 -0.210666666666667 1.14209014013057 13.9994754358431 -0.038 -0.210666666666667 0.768760367977763 0.0398155258975863 -0.309150054633792 -2.691207854751 Q92882 OSTF1 Q92882.S87.p_OSTF1 Q92882_S87s _1_1_87_87 Q92882 Q92882 Osteoclast-stimulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15027.15027.3 10.32 6.02 99 1 1 1 0 437.5694 1230.7269 S87s TMT10 83 (K) RGNLsWLR (E) RGNLS(1.0)WLR s:Phosphorylated S OSTF1 23957.5 2 1 2391.1 85.48 HUMAN 1 -1.1421 -13.9995 AAKRRLGSVEAPKTN-p P46087-4;S58-p AAKRRLGSVEAPKTN 0.17057946715229 0.015294259246325 -0.253333333333333 -0.642 15.3291311021911 25.1136188831943 -0.253333333333333 -0.642 0.02931479690991 0.00308061986567118 -2.94041095682225 -5.06624981434488 P46087 NOP2 P46087.4.S58.p_NOP2 P46087-4_S58s _1_1_58_58 P46087-4 P46087-4 Isoform 4 of Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14790.14790.2 10.93 10.93 99 1 1 1 0 669.8743 1258.7771 S58s TMT10 56 (R) LGsVEAPK (T) LGS(1.0)VEAPK K:TMT10,s:Phosphorylated S NOP2 93257.6 1 1 1090.1 179.08 HUMAN 1 -15.3291 -25.1136 AAKSADGSAPAGEGE-p Q01650;S35-p AAKSADGSAPAGEGE 0.699126902533387 0.0344543024924947 0.0656666666666667 0.5 2.92105282471527 19.708698560923 0.0656666666666666 0.5 0.510381257408695 0.0106937528814776 0.704331110751544 3.81320894383681 Q01650 SLC7A5 Q01650.S35.p_SLC7A5 Q01650_S35s _1_1_35_35 Q01650 Q01650 Large neutral amino acids transporter small subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10495.10495.2 16 12.38 3.686 3 1 1 0 1005.9716 1930.9668 S35s TMT10 31 (K) SADGsAPAGEGEGVTLQR (N) S(0.0)ADGS(0.99)APAGEGEGVT(0.0)LQR s:Phosphorylated S SLC7A5 55693.8 1 2 4366.1 32.66 HUMAN 1 2.9211 19.7087 AAKSDDTSDDDFMEE-p O94992;S237-p AAKSDDTSDDDFMEE 0.906426058670281 0.0499073205008784 -0.0183333333333333 0.375 0.837968973321863 17.4056339095525 -0.0183333333333334 0.375 0.824523622548869 0.0181734177195341 -0.232725779632699 3.34033827715974 O94992 HEXIM1 O94992.S237.p_HEXIM1 O94992_S237s_1_1_237_237 O94992 O94992 Protein HEXIM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13508.13508.3 10.08 10.08 1.159 5 1 1 0 1262.1376 3672.4183 S237s M242m M255m TMT10 233 (K) SDDTsDDDFmEEGGEEDGGSDGmGGDGSEFLQR (D) S(0.0)DDT(0.0)S(0.99)DDDFM(1.0)EEGGEEDGGS(0.0)DGM(1.0)GGDGS(0.0)EFLQR s:Phosphorylated S,m:Oxidized methionine HEXIM1 40908 4 3 1285.2 158.28 HUMAN 1 -0.838 17.4056 AALDALNTDDENDEE-p P55081;T267-p AALDALNTDDENDEE 0.948648475692561 0.626615106167606 0.0103333333333333 0.0483333333333334 0.45426059704524 2.76046297363969 0.0103333333333333 0.0483333333333334 0.900687095118058 0.529606982860623 0.130762516008522 0.671235061810236 P55081 MFAP1 P55081.T267.p_MFAP1 P55081_T267t _1_1_267_267 P55081 P55081 Microfibrillar-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26214.26214.3 26.01 26.01 14.111 3 1 1 0 1145.5408 3354.6378 T267t TMT10 258 (R) SLAALDALNtDDENDEEEYEAWKVR (E) S(0.0)LAALDALNT(0.99)DDENDEEEY(0.0)EAWKVR K:TMT10,t:Phosphorylated T MFAP1 51957.5 24 8 354.1 349.52 HUMAN 1 0.4543 2.7605 AALDHSCSPSKGPVD-p Q5T7B8;S911-p AALDHSCSPSKGPVD 0.167303178237928 0.00356137322963082 0.587333333333333 -0.948 15.521962621628 36.5048183528153 0.587333333333333 -0.948 0.0280416611993332 0.000223623872926262 2.97693101290977 -8.66504653312422 Q5T7B8 KIF24 Q5T7B8.S911.p_KIF24 Q5T7B8_S911s _1_1_911_911 Q5T7B8 Q5T7B8|Q5T7B8-2|Q5T7B8-4 Kinesin-like protein KIF24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12933.12933.4 14.52 14.52 1.754 4 1 1 0 627.8096 2428.2443 S911s TMT10 904 (R) AALDHSCsPSKGPVDWSR (E) AALDHS(0.0)CS(0.99)PS(0.0)KGPVDWS(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIF24 153269.8 2 4 1608.1 127.82 HUMAN 1 15.522 -36.5048 AALGLQDSDDEDAAV-p A0A0C4DG89;S804-p AALGLQDSDDEDAAV 0.327330232370136 0.0429617188479736 0.138666666666667 0.245333333333333 9.07813618119563 18.3162143857527 0.138666666666667 0.245333333333333 0.123647796665117 0.0147359643241499 1.82188962249389 3.52359727143091 A0A0C4DG89 DDX46 A0A0C4DG89.S804.p_DDX46 A0A0C4DG89_S804s _1_1_804_804 A0A0C4DG89 A0A0C4DG89|Q7L014 Probable ATP-dependent RNA helicase DDX46 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36146.36146.4 24.84 24.84 18.638 3 1 1 0 981.2296 3841.9257 S804s TMT10 797 (K) AALGLQDsDDEDAAVDIDEQIESMFNSKK (R) AALGLQDS(0.99)DDEDAAVDIDEQIES(0.0)MFNS(0.0)KK K:TMT10,s:Phosphorylated S DDX46 117972.6 70 6 985.1 191.96 HUMAN 1 9.0781 18.3162 AALGSRGSCSTEVEK-p O75348;S68-p AALGSRGSCSTEVEK 0.328895081583708 0.193360795955699 -0.194 0.194333333333333 9.0279497808688 9.38272641631239 -0.194 0.194333333333333 0.125084939234015 0.115272936953905 -1.81320131764704 1.87393193680112 O75348 ATP6V1G1 O75348.S68.p_ATP6V1G1 O75348_S68s _1_1_68_68 O75348 O75348 V-type proton ATPase subunit G 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7426.7426.3 7.7 7.7 1.603 4 1 1 0 717.3419 2070.0425 S68s Hydrogen 67 (R) GsCSTEVEKETQEK (M) GS(0.99)CS(0.0)T(0.0)EVEKET(0.0)QEK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S ATP6V1G1 13871.4 2 3 4536.1 30.22 HUMAN 1 -9.0279 9.3827 AALILGVSPTANKGK-p Q96DA6;S70-p AALILGVSPTANKGK 0.887456189668158 0.253409088297421 0.0213333333333333 0.178 1.01055744083411 7.8523897903437 0.0213333333333333 0.178 0.792399615107529 0.163968725492043 0.27652455775715 1.6090432171457 Q96DA6 DNAJC19 Q96DA6.S70.p_DNAJC19 Q96DA6_S70s _1_1_70_70 Q96DA6 Q96DA6|Q96DA6-2 Mitochondrial import inner membrane translocase subunit TIM14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24350.24350.2 19.77 19.77 1.652 2 1 1 0 961.5413 1842.1101 S70s TMT10 62 (R) EAALILGVsPTANK (G) EAALILGVS(0.99)PT(0.0)ANK K:TMT10,s:Phosphorylated S DNAJC19 12498.4 5 1 4127.1 37.05 HUMAN 1 1.0106 7.8524 AALIQDQSEEEEEEE-p Q8NE71;S140-p AALIQDQSEEEEEEE 0.301590454921122 0.0278101867784511 -0.282666666666667 0.294 9.76565446874143 21.0871036405542 -0.282666666666667 0.294 0.105544243922513 0.0077855560555429 -1.94102388703688 4.11211898100271 Q8NE71 ABCF1 Q8NE71.S140.p_ABCF1 Q8NE71_S140s _1_1_140_140 Q8NE71 Q8NE71|Q8NE71-2 ATP-binding cassette sub-family F member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22353.22353.5 26.45 25.02 99 1 1 1 0 716.3596 3497.8003 S140s TMT10 128 (K) GGNVFAALIQDQsEEEEEEEKHPPK (P) GGNVFAALIQDQS(1.0)EEEEEEEKHPPK K:TMT10,s:Phosphorylated S ABCF1 96380.4 21 3 203.1 449.36 HUMAN 1 -9.7657 21.0871 AALLSPGSPKRRRCA-p Q9H9L7;S22-p AALLSPGSPKRRRCA 0.0745793811074775 0.0185705938798569 -0.475666666666667 -0.351333333333333 24.1526541263983 23.8242113571764 -0.475666666666667 -0.351333333333333 0.00384356816279578 0.00414551856388332 -4.83232200063461 -4.74645365095599 Q9H9L7 AKIRIN1 Q9H9L7.S22.p_AKIRIN1 Q9H9L7_S22s _1_1_22_22 Q9H9L7 Q9H9L7|Q9H9L7-2|B4DQP0 Akirin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23770.23770.4 17.76 14.16 2.173 2 1 1 0 567.8018 2188.22 S22s TMT10 9 (K) RPMEFEAALLSPGsPK (R) RPMEFEAALLS(0.0)PGS(0.99)PK K:TMT10,s:Phosphorylated S AKIRIN1 22094.6 6 1 4379.1 32.34 HUMAN 1 -24.1527 -23.8242 AALRPEVSLERRGPE-p Q8WXC6-1;S14-p AALRPEVSLERRGPE 0.215241570201118 0.139613235831994 -0.318666666666667 -0.232666666666667 12.8533524128484 11.2666511710255 -0.318666666666667 -0.232666666666667 0.0518399720507686 0.0747024564308633 -2.48467509038093 -2.20187130427814 Q8WXC6 MYEOV2 Q8WXC6.1.S14.p_MYEOV2 Q8WXC6-1_S14s _1_1_14_14 Q8WXC6-1 Q8WXC6-1 Isoform 2 of COP9 signalosome complex subunit 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15157.15157.3 11.68 8.9 99 1 1 1 0 616.326 1766.9962 S14s TMT10 4 (R) APEAALRPEVsLER (R) APEAALRPEVS(1.0)LER s:Phosphorylated S COPS9 27949.6 1 1 6441.1 11.68 HUMAN 1 -12.8534 -11.2667 AALRSPDSPKTPKSP-p O00716;S166-p AALRSPDSPKTPKSP 0.19060140727462 0.922705897058253 -0.401666666666667 0.0106666666666667 14.0818061460099 0.491934095898785 -0.401666666666667 0.0106666666666667 0.039067838648457 0.89290774581945 -2.70795062885318 0.14106998165639 O00716 E2F3 O00716.S166.p_E2F3 O00716_S166s _1_1_166_166 O00716 O00716 Transcription factor E2F3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6884.6884.2 11.41 11.41 2.173 3 1 1 0 862.4832 1643.9935 S166s TMT10 163 (R) SPDsPKTPK (S) S(0.0)PDS(0.99)PKT(0.0)PK K:TMT10,s:Phosphorylated S E2F3 49560.1 4 2 3334.1 53.58 HUMAN 1 -14.0818 0.4919 AALRVADSDYEAICK-p A0A0C4DFQ0;S178-p AALRVADSDYEAICK 0.994167574639875 0.9657804519961 0.00333333333333333 0.00666666666666667 0.0507737483873625 0.216590287268393 0.00333333333333326 0.00666666666666668 0.988376987600233 0.951351421147268 0.0152529280603937 0.0638844004422508 A0A0C4DFQ0 PDE4DIP A0A0C4DFQ0.S178.p_PDE4DIP A0A0C4DFQ0_S178s _1_1_178_178 A0A0C4DFQ0 Q5VU43-2|A0A0C4DFQ0 Myomegalin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16380.16380.3 15.63 15.63 5.351 2 1 1 0 603.623 1728.8879 S178s TMT10 175 (R) VADsDYEAICK (V) VADS(0.99)DY(0.0)EAICK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PDE4DIP 129884.6 1 1 2845.1 68.16 HUMAN 1 0.0508 0.2166 AALSRAHSPALGVHS-p Q9H1A4;S355-p AALSRAHSPALGVHS 0.414602433785073 0.383850077579025 0.163 -0.094 7.05606067123554 5.52693062480274 0.163 -0.094 0.196967209825407 0.280096019820659 1.47082281273715 -1.19954003150134 Q9H1A4 ANAPC1 Q9H1A4.S355.p_ANAPC1 Q9H1A4_S355s _1_1_355_355 Q9H1A4 Q9H1A4 Anaphase-promoting complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10550.10550.3 18.21 18.21 9.084 3 1 1 0 653.6652 1879.0136 S355s TMT10 353 (R) AHsPALGVHSFSGVQR (F) AHS(0.99)PALGVHS(0.0)FS(0.0)GVQR s:Phosphorylated S ANAPC1 218664.2 4 3 460.1 305.66 HUMAN 1 7.0561 -5.5269 AALSTALSEKRTLEG-p P02545;S153-p AALSTALSEKRTLEG 0.0958718498060605 0.190210836735866 -0.347666666666667 0.254333333333333 21.6030024563301 9.47807501375037 -0.347666666666667 0.254333333333333 0.00691352845014576 0.112769719095225 -4.23173171716156 1.89043862549659 P02545 LMNA P02545.S153.p_LMNA P02545_S153s _1_1_153_153 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14220.14220.3 11.04 11.04 2.269 3 1 1 0 605.3329 1734.0162 S153s TMT10 145 (K) EAALSTALsEKR (T) EAALS(0.0)T(0.0)ALS(0.99)EKR K:TMT10,s:Phosphorylated S LMNA 74423.5 1 11 60.1 706.83 HUMAN 1 -21.603 9.4781 AAMAGPGSPPRRVTS-p Q8N2Y8;S536-p AAMAGPGSPPRRVTS 0.806694949927983 0.666415746518918 0.0406666666666667 -0.046 1.79589058690243 2.41208966385366 0.0406666666666667 -0.046 0.661318910075442 0.573840285123099 0.463110599092428 -0.598169780926418 Q8N2Y8 RUSC2 Q8N2Y8.S536.p_RUSC2 Q8N2Y8_S536s _1_1_536_536 Q8N2Y8 Q8N2Y8 Iporin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15369.15369.2 18.53 18.53 8.508 2 1 1 0 902.4368 1723.8999 S536s TMT10 524 (R) LSEGPAAMAGPGsPPR (R) LS(0.0)EGPAAMAGPGS(0.99)PPR s:Phosphorylated S RUSC2 163333.5 7 3 1536.1 133.33 HUMAN 1 1.7959 -2.4121 AAMGWRLSARSGPRF-p Q14571;S1581-p AAMGWRLSARSGPRF 0.791939334471681 0.972534712865789 0.0836666666666667 -0.00666666666666662 1.95405747936674 0.170755510308326 0.0836666666666667 -0.00666666666666661 0.637667454775748 0.961445008286938 0.4986035299456 -0.0506145215083804 Q14571 ITPR2 Q14571.S1581.p_ITPR2 Q14571_S1581s _1_1_1581_1581 Q14571 Q14571 Inositol 1,4,5-trisphosphate receptor type 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14756.14756.3 10.57 10.57 99 1 1 1 0 476.5781 1347.7517 S1581s TMT10 1574 (R) AAMGWRLsAR (S) AAMGWRLS(1.0)AR s:Phosphorylated S ITPR2 311253.2 1 4 3426.1 51.39 HUMAN 1 1.9541 -0.1708 AAMRRSFSADNFIGI-p Q8N7R7;S344-p AAMRRSFSADNFIGI 0.558103293301309 0.339182347309897 0.081 0.101666666666667 4.67941359774539 6.22030453904537 0.081 0.101666666666667 0.340454156116727 0.238764384899367 1.04496724686771 1.32338991525865 Q8N7R7 CCNYL1 Q8N7R7.S344.p_CCNYL1 Q8N7R7_S344s _1_1_344_344 Q8N7R7 Q8N7R7|Q8N7R7-2|Q8N7R7-3 Cyclin-Y-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23617.23617.2 16.08 16.08 2.896 2 1 1 0 832.4047 1583.8379 S344s TMT10 342 (R) SFsADNFIGIQR (S) S(0.0)FS(0.99)ADNFIGIQR s:Phosphorylated S CCNYL1 41274.9 10 4 1234.2 163.69 HUMAN 1 4.6794 6.2203 AAMVPGRSESWERGE-p O43598;S10-p AAMVPGRSESWERGE 0.864457736273426 0.0139718865756052 0.0503333333333333 0.448 1.23256172348373 25.7357335329161 0.0503333333333333 0.448 0.752911321485481 0.0026694798480421 0.331238068534833 5.22578753536384 O43598 DNPH1 O43598.S10.p_DNPH1 O43598_S10s _1_1_10_10 O43598 O43598|O43598-2 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18000.18000.4 15.82 13.59 1.551 4 1 1 0 691.5794 2683.3248 S10s TMT10 10 (R) sESWERGEPGRPALYFCGSIR (G) S(0.99)ES(0.0)WERGEPGRPALY(0.0)FCGS(0.0)IR C:Carbamidomethylation,s:Phosphorylated S DNPH1 19222.2 8 1 2326.1 87.8 HUMAN 1 1.2326 25.7357 AANASGSSPDAPAKD-p O75962;S2429-p AANASGSSPDAPAKD 0.399238300835451 0.087968173252397 0.204333333333333 -0.224333333333333 7.35685533589595 13.9752402335693 0.204333333333333 -0.224333333333333 0.183786863600785 0.040038332018489 1.52334552698837 -2.6867653989561 O75962 TRIO O75962.S2429.p_TRIO O75962_S2429s _1_1_2429_2429 O75962 O75962|O75962-4|O75962-5 Triple functional domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6464.6464.3 17.4 17.4 1.487 3 1 1 0 732.7255 2116.1965 S2429s TMT10 2420 (R) KGAANASGSsPDAPAK (D) KGAANAS(0.0)GS(0.0)S(0.99)PDAPAK K:TMT10,s:Phosphorylated S TRIO 349974.9 7 19 450.1 308.79 HUMAN 1 7.3569 -13.9752 AANEAGDSSQDEAED-p Q9NVU0;S161-p AANEAGDSSQDEAED 0.526493980821254 0.593723253161795 0.126666666666667 0.059 5.15476566489967 3.06404026553786 0.126666666666667 0.059 0.305157068028431 0.493851040864988 1.1323455546978 0.733285663089972 Q9NVU0 POLR3E Q9NVU0.S161.p_POLR3E Q9NVU0_S161sS162s_2_2_161_162 Q9NVU0 Q9NVU0|Q9NVU0-4|Q9NVU0-5|A0A0C4DH01|Q9NVU0-2|Q9NVU0-3 DNA-directed RNA polymerase III subunit RPC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.9674.10285.3 17.72 17.72 99 2 2 2 0 866.6893 2438.1207 S161s S162s TMT10 153 (R) EAANEAGDssQDEAEDDVK (Q) EAANEAGDS(1.0)S(1.0)QDEAEDDVK K:TMT10,s:Phosphorylated S POLR3E 80581.3 9 4 2480.1 81.72 HUMAN 1 5.1548 3.064 AANMLQQSGSKNTGA-p P46063;S634-p AANMLQQSGSKNTGA 0.940646984077448 0.153710153006812 -0.0113333333333333 -0.174666666666667 0.522481093106002 10.6949631424184 -0.0113333333333334 -0.174666666666667 0.8866493309412 0.085212574314526 -0.149398786391542 -2.10183386702559 P46063 RECQL P46063.S634.p_RECQL P46063_S634s _1_1_634_634 P46063 P46063 ATP-dependent DNA helicase Q1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11935.11935.2 15.92 15.92 2.341 2 1 1 0 836.9264 1592.883 S634s TMT10 627 (K) AANMLQQsGSK (N) AANMLQQS(0.99)GS(0.0)K K:TMT10,s:Phosphorylated S RECQL 74483 5 5 1140.3 173.27 HUMAN 1 -0.5225 -10.695 AANPIQFTLNKEKLK-p P23921;T751-p AANPIQFTLNKEKLK 0.325038366971884 0.00851650591002088 -0.135666666666667 -0.433666666666667 9.14141680881863 29.3725664521505 -0.135666666666667 -0.433666666666667 0.12185919900207 0.00115542924244322 -1.83284567376715 -6.23386378314203 P23921 RRM1 P23921.T751.p_RRM1 P23921_T751t _1_1_751_751 P23921 P23921|E9PL69 Ribonucleoside-diphosphate reductase large subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18989.18989.3 14.45 14.45 14.454 2 1 1 0 703.7259 2029.1959 T751t TMT10 741 (R) TRPAANPIQFtLNK (E) T(0.0)RPAANPIQFT(0.99)LNK K:TMT10,t:Phosphorylated T RRM1 90981.4 1 6 1744.1 118.13 HUMAN 1 -9.1414 -29.3726 AANTNRPSPGGHERK-p O60356;S58-p AANTNRPSPGGHERK 0.25414491835742 0.758094344825314 -0.288 -0.083 11.3276032786312 1.66086222914603 -0.288 -0.083 0.0736613496913623 0.682203239067872 -2.21360533328187 -0.432267900417336 O60356 NUPR1 O60356.S58.p_NUPR1 O60356_S58s _1_1_58_58 O60356 O60356-2 Nuclear protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3799.3799.3 7.93 7.93 7.929 2 1 1 0 658.3106 1892.9525 S58s TMT10 49 (R) EAAANTNRPsPGGHER (K) EAAANT(0.0)NRPS(0.99)PGGHER s:Phosphorylated S NUPR1 8872.6 3 2 3219.1 57.04 HUMAN 1 -11.3276 -1.6609 AAPAHRGTPDTDLEV-p P0C7T5;T330-p AAPAHRGTPDTDLEV 0.26956048078314 0.0162143545089414 0.159333333333333 0.367333333333333 10.7891113626432 24.7195289650917 0.159333333333333 0.367333333333333 0.0833851786843319 0.00337323892755413 2.1192030461315 4.96698206922579 P0C7T5 ATXN1L P0C7T5.T330.p_ATXN1L P0C7T5_T330t _1_1_330_330 P0C7T5 P0C7T5 Ataxin-1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10851.10851.3 16.28 11.44 1.458 2 1 1 0 824.0808 2390.2626 T330t TMT10 320 (R) VEVAAPAHRGtPDTDLEVQR (V) VEVAAPAHRGT(0.99)PDT(0.0)DLEVQR t:Phosphorylated T ATXN1L 73818.4 2 6 1155.1 171.78 HUMAN 1 10.7891 24.7195 AAPDADLSQEPHLF_-p O15360;S1449-p AAPDADLSQEPHLF_ 0.94478758147709 0.0689517361438301 0.016 -0.263666666666667 0.484082793746912 15.4466132627485 0.016 -0.263666666666667 0.894523430453177 0.0285324243014271 0.138938228126351 -2.96063820921946 O15360 FANCA O15360.S1449.p_FANCA O15360_S1449s _1_1_1449_1449 O15360 O15360 Fanconi anemia group A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22956.22956.3 12.44 12.44 99 1 1 1 0 692.6624 1995.9973 S1449s TMT10 1440 (R) QQAAPDADLsQEPHLF (-) QQAAPDADLS(1.0)QEPHLF s:Phosphorylated S FANCA 164940.3 1 2 4617.1 28.71 HUMAN 1 0.4841 -15.4466 AAPEAPRSPPAKAGS-p Q5JR12;S45-p AAPEAPRSPPAKAGS 0.199407580712615 0.75846726294219 0.203 -0.03 13.6246353079403 1.65796704717508 0.203 -0.03 0.0434046710514186 0.682658174851854 2.62425555947999 -0.431602470214781 Q5JR12 PPM1J Q5JR12.S45.p_PPM1J Q5JR12_S45s _1_1_45_45 Q5JR12 Q5JR12|S4R3C3 Protein phosphatase 1J HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14985.14985.5 25.44 25.44 6.466 3 1 1 0 584.509 2838.5514 S45s TMT10 25 (K) SPDLPNAASAPPAAAPEAPRsPPAK (A) S(0.0)PDLPNAAS(0.0)APPAAAPEAPRS(0.99)PPAK K:TMT10,s:Phosphorylated S PPM1J 55517.9 3 2 2032.1 101.56 HUMAN 1 13.6246 -1.658 AAPGASPSPGGDAAW-p P52701;S43-p AAPGASPSPGGDAAW 0.395891044587101 0.0398015024450628 0.158 -0.308333333333333 7.42469274070337 18.7785483129112 0.158 -0.308333333333333 0.18093839179507 0.0132478428796709 1.53516754349544 -3.61845320716068 P52701 MSH6 P52701.S43.p_MSH6 P52701_S43s _1_1_43_43 P52701 P52701|P52701-3|P52701-2|F8WAX8|F8W7G9 DNA mismatch repair protein Msh6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15589.15589.4 24.46 24.46 1.669 3 1 1 0 738.6138 2871.4699 S43s TMT10 34 (R) AAAAPGASPsPGGDAAWSEAGPGPRPLAR (S) AAAAPGAS(0.0)PS(0.99)PGGDAAWS(0.0)EAGPGPRPLAR s:Phosphorylated S MSH6 154608.6 2 5 875.1 209.27 HUMAN 1 7.4247 -18.7785 AAPLLRRTARPGGGT-p P51798-2;T27-p AAPLLRRTARPGGGT 0.378389324662461 0.414935521141855 0.173 0.0783333333333333 7.7970251545775 5.08158672681227 0.173 0.0783333333333333 0.166072408647009 0.310342552164527 1.59992900036569 1.1187592408571 P51798 CLCN7 P51798.2.T27.p_CLCN7 P51798-2_T27tT34t_2_2_27_34 P51798-2 H0Y2M6|P51798-2 Isoform 2 of H(+)/Cl(-) exchange transporter 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24693.24693.4 10.1 10.1 99 2 2 2 0 868.4149 3309.7112 T27t T34t N38n Hydrogen 27 (R) tARPGGGtPLLnGAGPGAARQDMDPPHPFPK (E) T(1.0)ARPGGGT(1.0)PLLN(1.0)GAGPGAARQDMDPPHPFPK K:TMT10-Lys-Only,t:Phosphorylated T,n:Deamidated CLCN7 86538 2 7 2487.2 81.4 HUMAN 1 7.797 5.0816 AAPPFLGSPVPFGGF-p Q9BRQ0;S97-p AAPPFLGSPVPFGGF 0.530763566971729 0.894127398663661 -0.088 0.0223333333333334 5.08998272469552 0.681942065322878 -0.088 0.0223333333333334 0.309743162011177 0.854684432140565 -1.12052263475037 0.192058656264788 Q9BRQ0 PYGO2 Q9BRQ0.S97.p_PYGO2 Q9BRQ0_S97s _1_1_97_97 Q9BRQ0 Q9BRQ0|Q5T171 Pygopus homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35586.35586.3 21.03 18.35 99 1 1 1 0 727.7208 2101.1796 S97s TMT10 87 (K) VGVAAPPFLGsPVPFGGFR (V) VGVAAPPFLGS(1.0)PVPFGGFR s:Phosphorylated S PYGO2 41643 2 4 2457.1 82.71 HUMAN 1 -5.09 0.6819 AAPPPPGSPSLPGRL-p W0Z7M9;S842-p AAPPPPGSPSLPGRL 0.936677542728734 0.219932987075571 -0.0163333333333333 0.120333333333333 0.553398437660061 8.65871580897407 -0.0163333333333333 0.120333333333333 0.8803597050367 0.136184731561755 -0.157768223391027 1.74868249969076 W0Z7M9 MKL1 W0Z7M9.S842.p_MKL1 W0Z7M9_S842s _1_1_842_842 W0Z7M9 W0Z7M9|Q969V6|A0A087WU73|B0QY83 MKL/myocardin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23246.23246.4 7.9 7.9 1.208 6 1 1 0 875.939 3420.7783 S842s TMT10 816 (K) TVCGSPLAAQPSPSAELPQAAPPPPGsPSLPGR (L) T(0.0)VCGS(0.0)PLAAQPS(0.0)PS(0.0)AELPQAAPPPPGS(0.99)PS(0.0)LPGR C:Carbamidomethylation,s:Phosphorylated S mkl1 103399.4 1 12 1467.1 139.9 HUMAN 1 -0.5534 8.6587 AAPPVPASPQRVLVQ-p P48378;S28-p AAPPVPASPQRVLVQ 0.269665314766001 0.692188763997407 0.296 -0.0953333333333333 10.7845026694609 2.19202762340052 0.28722038764133 -0.0953333333333333 0.0834737132383605 0.603666725137528 2.11839736702825 -0.550853861340015 P48378 RFX2 P48378.S28.p_RFX2 P48378_S28s _1_1_28_28 P48378 P48378|P48378-2 DNA-binding protein RFX2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19447.19447.3 17.49 17.49 3.514 5 1 1 0 1046.8292 3058.5011 S28s Acetyl 1 (-) MQNSEGGADSPASVALRPSAAAPPVPAsPQR (V) MQNS(0.0)EGGADS(0.0)PAS(0.0)VALRPS(0.0)AAAPPVPAS(0.99)PQR s:Phosphorylated S RFX2 80385.2 4 6 1675.2 121.84 HUMAN 1 10.7845 -2.192 AAPQRSQSPLRGMPE-p O95817;S136-p AAPQRSQSPLRGMPE 0.888804722871773 0.952285258377512 -0.0393333333333333 0.025 0.998327516555518 0.301748156454778 -0.0393333333333334 0.0250000000000001 0.794634192252055 0.932878715500631 -0.273458849940577 0.0882066970368614 O95817 BAG3 O95817.S136.p_BAG3 O95817_S136s _1_1_136_136 O95817 O95817 BAG family molecular chaperone regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12248.12248.3 15.57 15.57 2.141 4 1 1 0 770.7243 2230.1902 S136s TMT10 134 (R) SQsPLRGMPETTQPDK (Q) S(0.0)QS(0.99)PLRGMPET(0.0)T(0.0)QPDK K:TMT10,s:Phosphorylated S BAG3 61764.7 4 2 416.1 321.05 HUMAN 1 -0.9983 0.3017 AAPSKPASAKKGKAE-p Q14978-3;S509-p AAPSKPASAKKGKAE 0.105102883027574 0.00133342802810582 -0.316666666666667 -1.17333333333333 20.5923238618273 46.7370275492805 -0.316666666666667 -1.17333333333333 0.00872504375998714 2.11981150583221e-05 -4.00723839380956 -13.6201906382772 Q14978 NOLC1 Q14978.3.S509.p_NOLC1 Q14978-3_S509s _1_1_509_509 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9352.9352.4 14.38 11.41 3.321 2 1 1 0 495.5378 1899.1631 S509s TMT10 498 (K) VAGGAAPSKPAsAK (K) VAGGAAPS(0.0)KPAS(0.99)AK K:TMT10,s:Phosphorylated S NOLC1 73744 10 11 72.1 655.55 HUMAN 1 -20.5923 -46.737 AAPVTVPTPPQGSSV-p Q9NR83;T39-p AAPVTVPTPPQGSSV 0.500460541538581 0.0974268457747565 0.157333333333333 -0.188 5.54282866612145 13.3712597321823 0.157333333333333 -0.188 0.279072558137422 0.0460123089054018 1.20267001868245 -2.57672382556391 Q9NR83 SLC2A4RG Q9NR83.T39.p_SLC2A4RG Q9NR83_T39t _1_1_39_39 Q9NR83 Q9NR83 SLC2A4 regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25174.25174.4 21.09 21.09 3.532 5 1 1 0 901.4407 3522.8179 T39t TMT10 32 (R) AAPVTVPtPPQGSSVGGGFAGLEFARPQESEPR (A) AAPVT(0.0)VPT(0.99)PPQGS(0.0)S(0.0)VGGGFAGLEFARPQES(0.0)EPR t:Phosphorylated T SLC2A4RG 41779.7 1 1 3692.1 45.25 HUMAN 1 5.5428 -13.3713 AAQAEVLSGDGQPDE-p O14686-3;S1722-p AAQAEVLSGDGQPDE 0.666248058866343 0.0588440653668338 0.061 0.240333333333333 3.29755788743916 16.3896911216196 0.061 0.240333333333333 0.467998230764095 0.0229631196031795 0.780227978380097 3.14109043585787 O14686 KMT2D O14686.3.S1722.p_KMT2D O14686-3_S1722s _1_1_1722_1722 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27620.27620.5 24.97 21.21 2.597 3 1 1 0 1009.3091 4962.5311 S1722s TMT10 1712 (K) KGPAAQAEVLsGDGQPDEGETVIPADLPAEGAVEQSLAEGDEK (K) KGPAAQAEVLS(0.99)GDGQPDEGET(0.0)VIPADLPAEGAVEQS(0.0)LAEGDEK K:TMT10,s:Phosphorylated S KMT2D 600227.3 3 14 17.1 1042.08 HUMAN 1 3.2976 16.3897 AAQAGPYSPEKFQPS-p Q9ULE0;S856-p AAQAGPYSPEKFQPS 0.480738689829534 0.436696446947909 -0.226666666666667 0.148666666666667 5.856061473229 4.793169678066 -0.226666666666667 0.148666666666667 0.259653303677903 0.331652314301568 -1.25887938522424 1.06580748482168 Q9ULE0 WWC3 Q9ULE0.S856.p_WWC3 Q9ULE0_S856s_1_1_856_856 Q9ULE0 Q9ULE0 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30570.30570.5 10.53 10.53 1.316 11 1 1 0 1160.1167 5715.5635 N824n S856s TMT10 812 (R) SWQADSVDSGCSnCTQTSPPYPEPCCMGIDSILGHPFAAQAGPYsPEK (F) S(0.0)WQADS(0.0)VDS(0.0)GCS(0.0)N(1.0)CT(0.0)QT(0.0)S(0.0)PPY(0.0)PEPCCMGIDS(0.0)ILGHPFAAQAGPY(0.0)S(0.99)PEK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S WWC3 123814.7 1 20 161.1 495.35 HUMAN 1 -5.8561 4.7932 AAQALAQSERKRHEL-p Q9ULV0;S1446-p AAQALAQSERKRHEL 0.0635370415880919 0.272265598479409 -0.484333333333333 -0.158666666666667 25.9323046020627 7.4418194881614 -0.484333333333333 -0.158666666666667 0.0025513470602521 0.18022625200439 -5.28384273653506 -1.53769893873763 Q9ULV0 MYO5B Q9ULV0.S1446.p_MYO5B Q9ULV0_S1446s _1_1_1446_1446 Q9ULV0 Q9ULV0|Q9ULV0-2|Q9ULV0-3 Unconventional myosin-Vb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14407.14407.4 14.91 14.91 99 1 1 1 0 656.8643 2544.4713 S1446s TMT10 1433 (K) KAQDLEAAQALAQsERK (R) KAQDLEAAQALAQS(1.0)ERK K:TMT10,s:Phosphorylated S MYO5B 215266.1 1 63 296.7 379.15 HUMAN 1 -25.9323 -7.4418 AAQDRPMSPGDCPPE-p P13994;S332-p AAQDRPMSPGDCPPE 0.881862132352605 0.0890732280427328 -0.0383333333333333 0.184666666666667 1.07417597542717 13.9003033245741 -0.0383333333333333 0.184666666666667 0.780876588567886 0.0407351826110779 -0.292382575427972 2.67304253327177 P13994 CCDC130 P13994.S332.p_CCDC130 P13994_S332s _1_1_332_332 P13994 P13994 Coiled-coil domain-containing protein 130 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10352.10352.3 24.66 23.74 11.538 4 1 1 0 1016.7894 2968.3866 S332s Hydrogen 321 (R) VPEEAAQDRPMsPGDCPPETTETPK (C) VPEEAAQDRPMS(0.99)PGDCPPET(0.0)T(0.0)ET(0.0)PK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S CCDC130 45258 4 4 3212.1 57.26 HUMAN 1 -1.0742 13.9003 AAQELSRSPRLPLRK-p Q9NRJ4;S565-p AAQELSRSPRLPLRK 0.837987362439317 0.73575025977309 0.0436666666666667 0.0643333333333334 1.48610848251747 1.83732111789054 0.0436666666666667 0.0643333333333333 0.710213873630782 0.65504010139982 0.391729920254303 0.472413198666095 Q9NRJ4 TULP4 Q9NRJ4.S565.p_TULP4 Q9NRJ4_S565s _1_1_565_565 Q9NRJ4 Q9NRJ4|Q9NRJ4-2 Tubby-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4813.4813.3 10.26 6.5 1.495 2 1 1 0 475.2466 1343.7593 S565s TMT10 558 (R) AAQELSRsPR (L) AAQELS(0.0)RS(0.99)PR s:Phosphorylated S TULP4 170594 1 4 2224.1 92.84 HUMAN 1 1.4861 1.8373 AAQGQAGSPDKSKHG-p A0A087X165;S1152-p AAQGQAGSPDKSKHG 0.0719549135296335 0.00278494099914611 0.954666666666667 -0.842333333333333 24.6338356017413 38.6784159248133 0.954666666666667 -0.842333333333333 0.00344045942070536 0.000135568380349884 4.9516323919161 -9.55253193200449 A0A087X165 NotFound A0A087X165.S1152.p_NotFound A0A087X165_S1152s _1_1_1152_1152 A0A087X165 A0A087X165|Q9C0H9-5|Q9C0H9-2 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5180.5180.3 12.34 12.34 99 1 1 1 0 523.2672 1487.8218 S1152s TMT10 1145 (K) AAQGQAGsPDK (S) AAQGQAGS(1.0)PDK K:TMT10,s:Phosphorylated S SRCIN1 130745.5 2 31 98.1 603.22 HUMAN 1 24.6338 -38.6784 AAQGVSPSPSAILER-p A0A087X165;S398-p AAQGVSPSPSAILER 0.314982031328173 0.364316692843788 0.227666666666667 -0.132666666666667 9.38712936946774 5.81260733748191 0.227666666666667 -0.132666666666667 0.11515613046144 0.262264353606552 1.87540044189978 -1.25081935109809 A0A087X165 NotFound A0A087X165.S398.p_NotFound A0A087X165_S398s _1_1_398_398 A0A087X165 A0A087X165|Q9C0H9-5|Q9C0H9-2 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19941.19941.3 14.64 14.64 1.275 3 1 1 0 781.751 2263.272 S398s TMT10 386 (R) LGGAPAAQGVSPsPSAILERR (D) LGGAPAAQGVS(0.0)PS(0.99)PS(0.0)AILERR s:Phosphorylated S SRCIN1 130745.5 1 11 98.1 603.22 HUMAN 1 9.3871 -5.8126 AAQHTAESECEQLVK-p Q14980;S801-p AAQHTAESECEQLVK 0.370464030449556 0.0284058958503704 0.121666666666667 0.327666666666667 7.99670700794644 20.9490616151224 0.121666666666667 0.327666666666667 0.158609537670418 0.00803699759719532 1.63458935590681 4.08160194413884 Q14980 NUMA1 Q14980.S801.p_NUMA1 Q14980_S801s _1_1_801_801 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-3|Q14980-4 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20659.20659.4 24.72 20.23 3.555 2 1 1 0 721.5989 2803.4007 S801s TMT10 788 (R) ELAEAMAAQHTAEsECEQLVK (E) ELAEAMAAQHT(0.0)AES(0.99)ECEQLVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NUMA1 239339.3 2 8 31.1 900.97 HUMAN 1 7.9967 20.9491 AAQKLALSPLSLGKE-p P49454;S3119-p AAQKLALSPLSLGKE 0.649743378726889 0.00179618067818409 -0.0673333333333333 -0.935 3.51196269564262 43.2592205187156 -0.0673333333333334 -0.935 0.445454889643152 4.72147775780038e-05 -0.822610275761374 -11.6991198883777 P49454 CENPF P49454.S3119.p_CENPF P49454_S3119s _1_1_3119_3119 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28000.28000.2 14.85 11.91 1.745 2 1 1 0 768.9613 1456.9503 S3119s TMT10 3116 (K) LALsPLSLGK (E) LALS(0.99)PLS(0.0)LGK K:TMT10,s:Phosphorylated S CENPF 371067.2 5 32 47.1 771.73 HUMAN 1 -3.512 -43.2592 AAQKQKISFLENNLE-p P33176;S833-p AAQKQKISFLENNLE 0.675985039090808 0.88412272656301 0.059 -0.0153333333333333 3.18600184457821 0.752229156957679 0.059 -0.0153333333333333 0.480175299069164 0.840963379180331 0.757944676356241 -0.210498202610817 P33176 KIF5B P33176.S833.p_KIF5B P33176_S833s _1_1_833_833 P33176 Q12840|P33176|O60282|J3KNA1|O60282-2 Kinesin-1 heavy chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30529.30529.3 9.42 9.42 4.347 2 1 1 0 858.1499 2492.4691 S833s TMT10 830 (K) QKIsFLENNLEQLTK (V) QKIS(0.99)FLENNLEQLT(0.0)K K:TMT10,s:Phosphorylated S KIF5B 110424.6 2 6 2011.1 102.48 HUMAN 1 3.186 -0.7522 AAQLKPMTPFKRTRI-p Q5JR04;T198-p AAQLKPMTPFKRTRI 0.490692853704506 0.00360242696478209 -0.0996666666666667 -0.622333333333333 5.69373351167777 36.3816151381993 -0.0996666666666667 -0.622333333333333 0.269542125572286 0.000230058607191067 -1.22980657875555 -8.61701718982489 Q5JR04 MOV10 Q5JR04.T198.p_MOV10 Q5JR04_T198t _1_1_198_198 Q5JR04 Q9HCE1|Q5JR04|Q9HCE1-2 Mov10, Moloney leukemia virus 10, homolog (Mouse), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27525.27525.5 15.85 15.85 2.759 2 1 1 0 633.1659 3081.8367 T198t TMT10 181 (R) FLAAVAHSPLAAQLKPMtPFKR (T) FLAAVAHS(0.0)PLAAQLKPMT(0.99)PFKR K:TMT10,t:Phosphorylated T MOV10 108006.7 1 3 2539.1 79.32 HUMAN 1 -5.6937 -36.3816 AAQPKSLSPPQSQSK-p I3L4C2;S358-p AAQPKSLSPPQSQSK 0.988265143996636 0.013651039737634 -0.00266666666666668 -0.396333333333333 0.105272011534673 25.9125885694244 -0.00266666666666668 -0.396333333333333 0.976051647501671 0.00256295595654528 -0.031432210806865 -5.27178788951672 I3L4C2 BAIAP2 I3L4C2.S358.p_BAIAP2 I3L4C2_S358s _1_1_358_358 I3L4C2 I3L4C2|Q9UQB8|Q9UQB8-2|Q9UQB8-6|Q9UQB8-4|Q9UQB8-5|Q9UQB8-3|B4DWA1 Brain-specific angiogenesis inhibitor 1-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9786.10190.2 12.19 7.07 2.974 4 1 1 0 798.9226 1516.8735 S358s TMT10 356 (K) SLsPPQSQSK (L) S(0.0)LS(0.99)PPQS(0.0)QS(0.0)K K:TMT10,s:Phosphorylated S BAIAP2 61608.4 2 9 386.1 333.05 HUMAN 1 -0.1053 -25.9126 AAQQDSDSDGEALGG-p Q3YEC7-2;S428-p AAQQDSDSDGEALGG 0.493093798200756 0.207724670405263 -0.093 0.193 5.65349604409604 8.97778351841699 -0.093 0.193 0.272051043206717 0.126538198779182 -1.22258150706777 1.8038698339234 Q3YEC7 RABL6 Q3YEC7.2.S428.p_RABL6 Q3YEC7-2_S428s _1_1_428_428 Q3YEC7-2 Q3YEC7-2|G3V154 Isoform 2 of Rab-like protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26420.26420.4 17.8 17.8 1.446 2 1 1 0 939.9108 3676.6507 S428s TMT10 421 (K) AAQQDSDsDGEALGGNPMVAGFQDDVDLEDQPR (G) AAQQDS(0.0)DS(0.99)DGEALGGNPMVAGFQDDVDLEDQPR s:Phosphorylated S RABL6 79919.7 2 4 429.1 317.58 HUMAN 1 -5.6535 8.9778 AAQREATSVHDLNDK-p Q13136;S338-p AAQREATSVHDLNDK 0.274349481664046 0.834381441762104 -0.329 0.0236666666666667 10.6314359104843 1.10268452866044 -0.329 0.0236666666666667 0.0864681981179612 0.775767438944907 -2.09165844386757 0.299411151427871 Q13136 PPFIA1 Q13136.S338.p_PPFIA1 Q13136_S338s _1_1_338_338 Q13136 Q13136|Q13136-2|E9PJZ7 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19871.19871.3 17.48 17.48 1.109 2 1 1 0 969.842 2827.5405 S338s TMT10 335 (R) EATsVHDLNDKLENEIANK (D) EAT(0.0)S(0.99)VHDLNDKLENEIANK K:TMT10,s:Phosphorylated S PPFIA1 136347 2 25 248.1 410.18 HUMAN 1 -10.6314 1.1027 AAQWFGVSGDWEGQR-p Q6PJF5;S129-p AAQWFGVSGDWEGQR 0.187254795627764 0.0556500441511317 -0.229333333333333 -0.337333333333333 14.2909669572527 16.7152956533029 -0.229333333333333 -0.337333333333333 0.0372308802420308 0.0213044552892863 -2.74649873916037 -3.20437748821654 Q6PJF5 RHBDF2 Q6PJF5.S129.p_RHBDF2 Q6PJF5_S129s _1_1_129_129 Q6PJF5 Q6PJF5|Q6PJF5-2 Inactive rhomboid protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25189.25189.3 17.61 17.61 99 1 1 1 0 687.3128 1979.9561 S129s TMT10 121 (K) GAAQWFGVsGDWEGQR (Q) GAAQWFGVS(1.0)GDWEGQR s:Phosphorylated S RHBDF2 98224.8 2 3 1595.1 129.07 HUMAN 1 -14.291 -16.7153 AARAEGLSLDASMHS-p O15440;S60-p AARAEGLSLDASMHS 0.955043498829414 0.21157020204542 -0.0146666666666667 -0.284 0.392655742615356 8.87402891318416 -0.0146666666666667 -0.284 0.913554425394914 0.129597644675456 -0.113727267631038 -1.78592422317944 O15440 ABCC5 O15440.S60.p_ABCC5 O15440_S60s _1_1_60_60 O15440 O15440|O15440-5|F8WCY8|A5PKY6|O15440-2 Multidrug resistance-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16157.16157.3 18.31 18.31 5.641 3 1 1 0 641.9784 1843.9534 S60s TMT10 56 (R) AEGLsLDASMHSQLR (I) AEGLS(0.99)LDAS(0.0)MHS(0.0)QLR s:Phosphorylated S ABCC5 161741.5 1 3 1666.1 122.51 HUMAN 1 -0.3927 -8.874 AARARRFSGLSAELR-p A0A087WXK5;S311-p AARARRFSGLSAELR 0.895965630809552 0.0330017468877295 0.0226666666666667 -0.295 0.934219675395552 19.979841083344 0.0226666666666667 -0.295 0.806451088550325 0.0100465255176389 0.257295746538847 -3.87100778206535 A0A087WXK5 NotFound A0A087WXK5.S311.p_NotFound A0A087WXK5_S311s _1_1_311_311 A0A087WXK5 A0A087WXK5|Q9BZC7-3|J3QSS3|Q9BZC7-2|E9PGB2 ATP-binding cassette sub-family A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15990.15990.3 8.81 5.91 2.77 2 1 1 0 482.2558 1364.7848 S311s TMT10 309 (R) RFsGLSAELR (N) RFS(0.99)GLS(0.0)AELR s:Phosphorylated S ABCA2 275398.6 1 2 1069.1 180.75 HUMAN 1 0.9342 -19.9798 AARGEGESPQARALA-p P18206-2;S566-p AARGEGESPQARALA 0.744043857023488 0.633303221039722 -0.0466666666666667 0.05 2.44023607936437 2.69685475878266 -0.0456606694172359 0.05 0.570133279402373 0.537420865629904 -0.604229823276054 0.658050428238532 P18206 VCL P18206.2.S566.p_VCL P18206-2_S566s _1_1_566_566 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24277.24277.5 16.74 16.74 9.974 2 1 1 0 628.1074 3056.5381 S566s TMT10 545 (K) CDRVDQLTAQLADLAARGEGEsPQAR (A) CDRVDQLT(0.0)AQLADLAARGEGES(0.99)PQAR C:Carbamidomethylation,s:Phosphorylated S VCL 117290.9 3 9 319.1 365.38 HUMAN 1 -2.4402 2.6969 AARGLDISNVKHVIN-p A0A0D9SF53;S508-p AARGLDISNVKHVIN 0.357905212489512 0.224522938541426 -0.132333333333333 -0.141 8.29504452459419 8.54282191426694 -0.132333333333333 -0.141 0.148079707381126 0.13986782084259 -1.68630807880067 -1.7286336035687 A0A0D9SF53 NotFound A0A0D9SF53.S508.p_NotFound A0A0D9SF53_S508s _1_1_508_508 A0A0D9SF53 A0A0D9SF53|O00571|A0A0D9SG12|O00571-2|A0A0D9SFB3 ATP-dependent RNA helicase DDX3X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19249.19249.2 10 5.13 99 1 1 1 0 692.388 1303.7986 S508s TMT10 504 (R) GLDIsNVK (H) GLDIS(1.0)NVK K:TMT10,s:Phosphorylated S DDX3X 82160.2 1 10 1042.1 184.93 HUMAN 1 -8.295 -8.5428 AARILAASWPQNRED-p Q01831;S903-p AARILAASWPQNRED 0.183772533717644 0.0419061090041573 -0.513333333333333 0.527666666666667 14.4717742634747 18.4644898350673 -0.513333333333333 0.527666666666667 0.0357126907981147 0.0142413452964313 -2.77995652534893 3.55388210122048 Q01831 XPC Q01831.S903.p_XPC Q01831_S903s _1_1_903_903 Q01831 Q01831|Q01831-2 DNA repair protein complementing XP-C cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18814.18814.3 15.64 9.48 99 1 1 1 0 775.3948 2244.2025 S903s TMT10 899 (R) ILAAsWPQNREDEEK (Q) ILAAS(1.0)WPQNREDEEK K:TMT10,s:Phosphorylated S XPC 106806.6 1 9 780.1 226.3 HUMAN 1 -14.4718 18.4645 AARLRRPSPPEPWDE-p Q9P1Y6;S936-p AARLRRPSPPEPWDE 0.64272011073416 0.624918021422122 0.0623333333333333 0.0563333333333333 3.58905095725116 2.77716227208839 0.0623333333333333 0.0563333333333334 0.437617725197364 0.527574471786973 0.837713345911601 0.674685516231176 Q9P1Y6 PHRF1 Q9P1Y6.S936.p_PHRF1 Q9P1Y6_S936s _1_1_936_936 Q9P1Y6 Q9P1Y6|Q9P1Y6-3|A0A0J9YWD5|A0A0J9YYB5|F8WEF5|B7ZM65|E9PJ24|Q9P1Y6-2|A0A0J9YX88 PHD and RING finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20022.20228.3 27.9 27.9 9.134 5 1 1 0 983.7288 2869.2006 S936s Hydrogen 934 (R) RPsPPEPWDEEDGASCSTFFGSEER (T) RPS(0.99)PPEPWDEEDGAS(0.0)CS(0.0)T(0.0)FFGS(0.0)EER C:Carbamidomethylation,s:Phosphorylated S PHRF1 180374.6 3 11 438.1 312.23 HUMAN 1 3.5891 2.7772 AARPAGATLERPKTL-p P04626;T1166-p AARPAGATLERPKTL 0.341477179185729 0.023345939998049 0.137333333333333 0.301 8.67061203917871 22.263228474402 0.137333333333333 0.301 0.135812203672487 0.00593850535677954 1.75134502545839 4.37768305788509 P04626 ERBB2 P04626.T1166.p_ERBB2 P04626_T1166t _1_1_1166_1166 P04626 P04626|P04626-4 Receptor tyrosine-protein kinase erbB-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11858.11858.3 9.41 9.41 99 1 1 1 0 639.0051 1835.0337 T1166t TMT10 1154 (R) EGPLPAARPAGAtLER (P) EGPLPAARPAGAT(1.0)LER t:Phosphorylated T ERBB2 141274.2 3 22 521.1 283.33 HUMAN 1 8.6706 22.2632 AARQQFLSLEQANKG-p Q8IVT2;S202-p AARQQFLSLEQANKG 0.700515511742099 0.890072423949469 -0.0723333333333333 0.0203333333333333 2.90552723346724 0.709441783445643 -0.0723333333333334 0.0203333333333333 0.512209084311078 0.849289630709286 -0.701157614671549 0.199299096240158 Q8IVT2 MISP Q8IVT2.S202.p_MISP Q8IVT2_S202s _1_1_202_202 Q8IVT2 Q8IVT2 Mitotic interactor and substrate of PLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20325.20325.3 11.27 11.27 99 1 1 1 0 615.3281 1764.0056 S202s TMT10 198 (R) QQFLsLEQANK (G) QQFLS(1.0)LEQANK K:TMT10,s:Phosphorylated S MISP 75526.3 1 4 490.1 294.31 HUMAN 1 -2.9055 0.7094 AARWTDGSLSPPAKE-p O15085-2;S1518-p AARWTDGSLSPPAKE 0.563831093280918 0.232185435102446 -0.101 -0.116333333333333 4.58411896605864 8.35348933109058 -0.101 -0.116333333333333 0.348007099144301 0.146100286268633 -1.02726272484602 -1.69587008144188 O15085 ARHGEF11 O15085.2.S1518.p_ARHGEF11 O15085-2_S1518sS1520s_2_2_1518_1520 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20853.20853.3 10.84 6.02 2.299 5 2 2 0 878.0889 2472.3135 S1518s S1520s TMT10 1514 (R) WTDGsLsPPAKEPLASDSR (N) WT(0.0)DGS(0.99)LS(0.99)PPAKEPLAS(0.0)DS(0.0)R K:TMT10,s:Phosphorylated S ARHGEF11 173153.4 2 29 228.1 424.05 HUMAN 1 -4.5841 -8.3535 AASAAATTPATSPPA-p A0A0U1RRH6;T152-p AASAAATTPATSPPA 0.095467434057863 0.0689517361438301 0.314666666666667 0.255333333333333 21.6395815265097 15.4449837367286 0.314666666666667 0.255333333333333 0.00685554281280329 0.0285431320247484 4.23999383913144 2.96032991995944 A0A0U1RRH6 NotFound A0A0U1RRH6.T152.p_NotFound A0A0U1RRH6_T151tT152tT155t_3_3_151_155 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23015.23015.5 9.79 9.79 1.104 16 3 3 0 994.2744 4727.4151 T151t T152t T155t TMT10 138 (K) ATVSENVAASAAAttPAtSPPAVNTSPSVPTTTTATEEQVSEPK (K) AT(0.0)VS(0.0)ENVAAS(0.0)AAAT(0.99)T(0.99)PAT(0.99)S(0.0)PPAVNT(0.0)S(0.0)PS(0.0)VPT(0.0)T(0.0)T(0.0)T(0.0)AT(0.0)EEQVS(0.0)EPK K:TMT10,t:Phosphorylated T PHF14 109152.4 1 26 126.1 543.2 HUMAN 1 21.6396 15.445 AASADDGSLNTSGAG-p Q9NWV8;S62-p AASADDGSLNTSGAG 0.463415485914398 0.0706578027945346 -0.123 0.201333333333333 6.16145539021987 15.299283777691 -0.123 0.201333333333333 0.242021785713747 0.029516959692519 -1.31327495614677 2.93281204163751 Q9NWV8 BABAM1 Q9NWV8.S62.p_BABAM1 Q9NWV8_S62s _1_1_62_62 Q9NWV8 Q9NWV8|J3KQS6|Q9NWV8-3|M0QXG9 BRISC and BRCA1-A complex member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10356.10822.3 20.8 20.8 2.277 5 1 1 0 882.4034 2565.2317 S62s TMT10 49 (R) SEGEGEAASADDGsLNTSGAGPK (S) S(0.0)EGEGEAAS(0.0)ADDGS(0.99)LNT(0.0)S(0.0)GAGPK K:TMT10,s:Phosphorylated S BABAM1 37072.9 4 4 1373.1 148.88 HUMAN 1 -6.1615 15.2993 AASEDHCSPSEETPS-p Q5FWF4;S588-p AASEDHCSPSEETPS 0.676823734876953 0.834587477701256 0.066 -0.027 3.17448081256844 1.10122347703023 0.066 -0.027 0.481450806715539 0.776028466198309 0.75563389077355 -0.299050155918022 Q5FWF4 ZRANB3 Q5FWF4.S588.p_ZRANB3 Q5FWF4_S588s _1_1_588_588 Q5FWF4 Q5FWF4|Q5FWF4-3|F5GYN7 DNA annealing helicase and endonuclease ZRANB3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8871.8871.3 14.4 14.4 1.184 6 1 1 0 866.732 2518.2132 S588s TMT10 580 (K) LAASEDHCsPSEETPSQSK (Q) LAAS(0.0)EDHCS(0.99)PS(0.0)EET(0.0)PS(0.0)QS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZRANB3 124900.4 1 2 4469.1 30.95 HUMAN 1 3.1745 -1.1012 AASEESNSEIEQEIP-p Q9NR30;S173-p AASEESNSEIEQEIP 0.844490429219358 0.715698318721438 -0.0311666666666667 -0.0373333333333333 1.41923182984616 1.99802739573379 -0.0311666666666667 -0.0373333333333333 0.721235038306585 0.631243996027708 -0.375966655477119 -0.508306153571832 Q9NR30 DDX21 Q9NR30.S173.p_DDX21 Q9NR30_S171sS173s_2_2_171_173 Q9NR30 Q9NR30|Q9NR30-2 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21581.21581.4 21.42 17.13 2.119 4 2 2 0 1079.2234 4152.9344 S171s N172n S173s TMT10 152 (K) NGFPHPEPDCNPSEAASEEsnsEIEQEIPVEQK (E) N(0.0)GFPHPEPDCN(0.0)PS(0.0)EAAS(0.0)EES(0.99)N(0.99)S(0.99)EIEQEIPVEQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated DDX21 87856.3 34 27 103.1 590.75 HUMAN 2 -1.4192 -1.998 AASEFFRSGKYDLDF-p P06733;S254-p AASEFFRSGKYDLDF 0.389737992008685 0.261087358319125 0.184333333333333 0.161 7.57085288446048 7.68534109460812 0.184333333333333 0.161 0.174950308064036 0.170398548314908 1.56061345518455 1.58004314535929 P06733 ENO1 P06733.S254.p_ENO1 P06733_S254s _1_1_254_254 P06733 P06733|P06733-2 Alpha-enolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16370.16370.4 10.07 4.07 1.857 4 1 1 0 649.3326 2514.3443 S254s TMT10 254 (R) sGKYDLDFKSPDDPSR (Y) S(0.99)GKY(0.0)DLDFKS(0.0)PDDPS(0.0)R K:TMT10,s:Phosphorylated S ENO1 47510.4 2 8 623.1 259.34 HUMAN 1 7.5709 7.6853 AASFPLRSPQPVCSP-p Q6KC79;S274-p AASFPLRSPQPVCSP 0.297852699853076 0.63949460899186 -0.158666666666667 0.0453333333333333 9.8923824409077 2.64439166075587 -0.158666666666667 0.0453333333333334 0.102508943119538 0.543952320661893 -1.96301953401454 0.647125231173072 Q6KC79 NIPBL Q6KC79.S274.p_NIPBL Q6KC79_S274s _1_1_274_274 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16422.16422.3 17.75 17.75 2.283 5 1 1 0 998.5041 2913.5293 S274s TMT10 266 (R) NAASFPLRsPQPVCSPAGSEGTPK (G) NAAS(0.0)FPLRS(0.99)PQPVCS(0.0)PAGS(0.0)EGT(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NIPBL 318099.5 3 2 50.1 752.87 HUMAN 1 -9.8924 2.6444 AASGAAMSLAGAEKN-p P08195-2;S33-p AASGAAMSLAGAEKN 0.408884674050016 0.631230155083806 0.113666666666667 -0.06 7.16572082087148 2.71620896238401 0.113666666666667 -0.06 0.192056017005517 0.535031194331511 1.48999172851118 -0.662069202782084 P08195 SLC3A2 P08195.2.S33.p_SLC3A2 P08195-2_S33s _1_1_33_33 P08195-2 P08195-4|J3KPF3|F5GZS6|P08195-3|P08195-2 Isoform 2 of 4F2 cell-surface antigen heavy chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24647.24647.4 23.3 21.49 3.381 2 1 1 0 946.2294 3701.9333 S33s TMT10 11 (K) EVELNELEPEKQPMNAASGAAMsLAGAEK (N) EVELNELEPEKQPMNAAS(0.0)GAAMS(0.99)LAGAEK K:TMT10,s:Phosphorylated S SLC3A2 58058 6 4 1865.1 110.46 HUMAN 1 7.1657 -2.7162 AASKSDVSPIIQPVP-p P40818;S392-p AASKSDVSPIIQPVP 0.358160899463675 0.19285371040853 0.19 -0.287333333333333 8.2858910973452 9.39868064765761 0.19 -0.287333333333333 0.148392137376309 0.114850247448752 1.68472219711978 -1.87669358215254 P40818 USP8 P40818.S392.p_USP8 P40818_S392s _1_1_392_392 P40818 P40818|P40818-2|A0A075B720 Ubiquitin carboxyl-terminal hydrolase 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24296.24296.3 14.25 14.25 2.286 3 1 1 0 673.3818 1938.1676 S392s TMT10 389 (K) SDVsPIIQPVPSIK (N) S(0.0)DVS(0.99)PIIQPVPS(0.0)IK K:TMT10,s:Phosphorylated S USP8 128490.8 6 4 788.1 224.97 HUMAN 1 8.2859 -9.3987 AASLRKVSMDNRLME-p Q7L1Q6-3;S242-p AASLRKVSMDNRLME 0.767385335666125 0.00241094428976185 0.0416666666666667 0.788333333333333 2.20234731122407 40.1492223513915 0.0416666666666667 0.788333333333334 0.602233997614145 9.66223875750409e-05 0.553161205787437 10.1986860380227 Q7L1Q6 BZW1 Q7L1Q6.3.S242.p_BZW1 Q7L1Q6-3_S242s _1_1_242_242 Q7L1Q6-3 Q7L1Q6-3|Q7L1Q6-4|Q7L1Q6-2 Isoform 3 of Basic leucine zipper and W2 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6775.6775.3 7.68 3.73 99 1 1 1 0 463.2444 1307.7506 S242s TMT10 240 (R) KVsMDNR (L) KVS(1.0)MDNR K:TMT10,s:Phosphorylated S BZW1 51452.2 2 2 4254.1 34.62 HUMAN 1 2.2023 40.1492 AASPKSPTAALNESL-p Q53EZ4;T430-p AASPKSPTAALNESL 0.144515890889882 0.0045642445280084 -0.253333333333333 -0.597 17.1504627696254 34.2827604713093 -0.253333333333333 -0.597 0.0192731953354724 0.00037301298716412 -3.29232872357821 -7.83386998607801 Q53EZ4 CEP55 Q53EZ4.T430.p_CEP55 Q53EZ4_T430tS436s_2_2_430_436 Q53EZ4 Q53EZ4 Centrosomal protein of 55 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21356.21356.3 15.6 15.6 1.129 4 2 2 0 1006.1849 2856.6108 T430t S436s TMT10 422 (K) VAASPKSPtAALNEsLVECPK (C) VAAS(0.0)PKS(0.0)PT(0.99)AALNES(0.99)LVECPK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S CEP55 54519.6 5 6 2677.1 74.29 HUMAN 1 -17.1505 -34.2828 AASPLPDSPGDKLVI-p Q68CZ2;S1154-p AASPLPDSPGDKLVI 0.409152196973989 0.00298196053006193 -0.147666666666667 -0.792333333333333 7.15391289107732 37.9671367001923 -0.147666666666667 -0.792333333333333 0.192578904071308 0.000159693165591557 -1.4879288713775 -9.25355113315941 Q68CZ2 TNS3 Q68CZ2.S1154.p_TNS3 Q68CZ2_S1154s _1_1_1154_1154 Q68CZ2 Q68CZ2|Q68CZ2-2 Tensin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23642.23642.3 21.4 21.4 2.923 3 1 1 0 921.1859 2681.5692 S1154s TMT10 1144 (K) ASEAASPLPDsPGDKLVIVK (F) AS(0.0)EAAS(0.0)PLPDS(0.99)PGDKLVIVK K:TMT10,s:Phosphorylated S TNS3 156460.9 3 20 183.1 477.16 HUMAN 1 -7.1539 -37.9671 AASPTPASPASNRAV-p Q99700;S733-p AASPTPASPASNRAV 0.854873018285174 0.309266952029794 0.0306666666666667 0.108333333333333 1.32268053701035 6.73668541246921 0.0306666666666667 0.108333333333333 0.737448924020887 0.211997851097466 0.352969528016508 1.41446184875407 Q99700 ATXN2 Q99700.S733.p_ATXN2 Q99700_S733s _1_1_733_733 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31811.31811.4 25.81 25.81 1.173 9 1 1 0 1136.8343 4464.3394 S733s TMT10 695 (R) QNSIGNTPSGPVLASPQAGIIPTEAVAMPIPAASPTPAsPASNR (A) Q(0.0)N(0.0)S(0.0)IGN(0.0)T(0.0)PS(0.0)GPVLAS(0.0)PQAGIIPT(0.0)EAVAM(0.0)PIPAAS(0.0)PT(0.0)PAS(0.99)PAS(0.0)N(0.0)R s:Phosphorylated S ATXN2 140907.9 8 14 176.1 481.52 HUMAN 1 1.3227 6.7367 AASQARGSDSEDGEF-p Q8TDD1-2;S39-p AASQARGSDSEDGEF 0.295125154480667 0.401735471383293 0.180333333333333 0.135333333333333 9.99377735681755 5.26790489310857 0.180333333333333 0.135333333333333 0.100143384351514 0.297309995738861 1.98062938472372 1.15269054837068 Q8TDD1 DDX54 Q8TDD1.2.S39.p_DDX54 Q8TDD1-2_S39sS41s_2_2_39_41 Q8TDD1-2 Q8TDD1-2 Isoform 2 of ATP-dependent RNA helicase DDX54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12392.12392.4 12.03 12.03 1.329 3 2 2 0 807.5892 3067.415 S39s S41s TMT10 31 (R) GAASQARGsDsEDGEFEIQAEDDARAR (K) GAAS(0.0)QARGS(0.99)DS(0.99)EDGEFEIQAEDDARAR s:Phosphorylated S DDX54 98949.4 11 8 373.1 338.92 HUMAN 1 9.9938 5.2679 AASSKEGSPLHKQSS-p Q9UDT6;S42-p AASSKEGSPLHKQSS 0.735304684778739 0.00818760311846468 0.0486666666666667 -0.464666666666667 2.52865376493173 29.7015928334228 0.0486666666666667 -0.464666666666667 0.558643337323569 0.00107112638318014 0.622935567799472 -6.33193849953878 Q9UDT6 CLIP2 Q9UDT6.S42.p_CLIP2 Q9UDT6_S42s _1_1_42_42 Q9UDT6 Q9UDT6 CAP-Gly domain-containing linker protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6857.6857.2 9.65 5.84 99 1 1 1 0 653.3521 1225.7305 S42s TMT10 40 (K) EGsPLHK (Q) EGS(1.0)PLHK K:TMT10,s:Phosphorylated S CLIP2 116291.8 2 21 372.2 339.16 HUMAN 1 2.5287 -29.7016 AASSLNLSNGETESV-p A0A0D9SEY1;S886-p AASSLNLSNGETESV 0.456945741797906 0.0145518105231177 -0.121666666666667 -0.459333333333333 6.26593931484176 25.4470556196674 -0.121666666666667 -0.459333333333333 0.236268632971904 0.00285295182381321 -1.3318033635417 -5.15132075630836 A0A0D9SEY1 NotFound A0A0D9SEY1.S886.p_NotFound A0A0D9SEY1_S886s _1_1_886_886 A0A0D9SEY1 O95819-3|A0A0D9SEY1|O95819-6|G3XAA2|E7ENQ1|A0A0D9SG62|E7EX83|C9J840 Mitogen-activated protein kinase kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15852.15852.2 16.79 16.79 3.434 5 1 1 0 1073.047 2065.1177 S886s TMT10 879 (R) AASSLNLsNGETESVK (T) AAS(0.0)S(0.0)LNLS(0.99)NGET(0.0)ES(0.0)VK K:TMT10,s:Phosphorylated S MAP4K4 151879.6 4 9 131.2 535.29 HUMAN 1 -6.2659 -25.4471 AASSSPDSP______-p Q5BKY9;S246-p AASSSPDSP______ 0.159684493303102 0.0338646648762048 0.232 0.428666666666667 15.9569124669884 19.8210946898124 0.232 0.428666666666667 0.0253693157220058 0.0104205473425718 3.0599213916534 3.83711051633868 Q5BKY9 FAM133B Q5BKY9.S246.p_FAM133B Q5BKY9_S246s _1_1_246_246 Q5BKY9 Q5BKY9|Q5BKY9-2 Protein FAM133B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5384.5384.2 17.31 12.1 6.604 4 1 1 0 742.8748 1404.7735 S246s TMT10 238 (K) KAASSSPDsP (-) KAAS(0.0)S(0.0)S(0.0)PDS(0.99)P K:TMT10,s:Phosphorylated S FAM133B 28384.5 3 4 2537.1 79.38 HUMAN 1 15.9569 19.8211 AASVRQNSATESADS-p Q9Y2H0;S973-p AASVRQNSATESADS 0.507989301063906 0.16956592755865 -0.116333333333333 0.143 5.4273972019476 10.1341037478951 -0.116333333333333 0.143 0.286589503321589 0.0969593343316761 -1.18183628466817 2.00419603837737 Q9Y2H0 DLGAP4 Q9Y2H0.S973.p_DLGAP4 Q9Y2H0_S973s_1_1_973_973 Q9Y2H0 Q9Y2H0|Q9Y2H0-1|Q9Y2H0-3|A0A0B4J2C2 Disks large-associated protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25180.25180.2 22.52 22.52 2.11 6 1 1 0 1186.5201 2309.0892 Q971q S973s Hydrogen 971 (R) qNsATESADSIEIYVPEAQTR (L) Q(1.0)NS(0.99)AT(0.0)ES(0.0)ADS(0.0)IEIY(0.0)VPEAQT(0.0)R q:Pyroglutamic acid,s:Phosphorylated S DLGAP4 108980 15 10 298.1 378.69 HUMAN 1 -5.4274 10.1341 AATKENDSSEEVDVF-p Q9NTI5;S1406-p AATKENDSSEEVDVF 0.413312492292849 0.0140943537235631 0.125333333333333 0.410333333333333 7.07606532037952 25.6676663726592 0.125333333333333 0.410333333333333 0.19606201781535 0.00271164831095893 1.47432158668468 5.20816021142916 Q9NTI5 PDS5B Q9NTI5.S1406.p_PDS5B Q9NTI5_S1406sS1407s_2_2_1406_1407 Q9NTI5 Q9NTI5 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25152.25152.4 23.57 23.57 2.331 8 2 2 0 1286.0807 4981.3598 S1406s S1407s TMT10 1398 (K) QAATKENDssEEVDVFQGSSPVDDIPQEETEEEEVSTVNVR (R) QAAT(0.0)KENDS(0.99)S(0.99)EEVDVFQGS(0.0)S(0.0)PVDDIPQEET(0.0)EEEEVS(0.0)T(0.0)VNVR K:TMT10,s:Phosphorylated S PDS5B 165919.5 9 24 100.1 597.99 HUMAN 1 7.0761 25.6677 AATLGAGTPPRPQAR-p A0A087X1U6;T34-p AATLGAGTPPRPQAR 0.288407607200218 0.513403148530411 0.177 -0.073 10.1829078277305 3.88516797488851 0.177 -0.073 0.095875847783062 0.408773941390978 2.01350647929722 -0.894966333762517 A0A087X1U6 EPPK1 A0A087X1U6.T34.p_EPPK1 A0A087X1U6_T34t _1_1_34_34 A0A087X1U6 P58107|A0A087X1U6 Epiplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12526.12526.4 16.62 16.62 2.144 2 1 1 0 494.5091 1895.0483 T34t TMT10 25 (R) AMAATLGAGtPPRPQAR (S) AMAAT(0.0)LGAGT(0.99)PPRPQAR t:Phosphorylated T EPPK1 558101.4 7 2 680.1 245.5 HUMAN 1 10.1829 -3.8852 AATQRPPSNGGAKET-p Q9UGU0;S640-p AATQRPPSNGGAKET 0.205354366013737 0.0248330183145853 -0.267333333333333 0.412 13.2934694335159 21.8341147718846 -0.267333333333333 0.412 0.046843901235324 0.00655523888507281 -2.56408548168136 4.27961670873077 Q9UGU0 TCF20 Q9UGU0.S640.p_TCF20 Q9UGU0_S640s _1_1_640_640 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6247.6247.4 16.55 16.23 1.986 3 1 1 0 631.0575 2441.2421 S640s TMT10 626 (K) GSQEDDPAATQRPPsNGGAK (E) GS(0.0)QEDDPAAT(0.0)QRPPS(0.99)NGGAK K:TMT10,s:Phosphorylated S TCF20 213250.7 7 11 197.1 457.96 HUMAN 1 -13.2935 21.8341 AATVFSKSFEQVSGV-p Q9BYI3;S453-p AATVFSKSFEQVSGV 0.364278922725023 0.951627785467761 -0.13 -0.00833333333333333 8.13789300615705 0.307334953639602 -0.13 -0.00833333333333332 0.153536168786691 0.931679424792751 -1.65907322859119 -0.0897877088755619 Q9BYI3 FAM126A Q9BYI3.S453.p_FAM126A Q9BYI3_S453s _1_1_453_453 Q9BYI3 Q9BYI3|Q9BYI3-2 Hyccin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19344.19344.4 23.18 16.97 2.206 8 1 1 0 1130.5345 4439.1396 S453s TMT10 453 (K) sFEQVSGVTVPHNPSSAVGCGAGTDANRFSACSLQEEK (L) S(0.99)FEQVS(0.0)GVT(0.0)VPHNPS(0.0)S(0.0)AVGCGAGT(0.0)DANRFS(0.0)ACS(0.0)LQEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM126A 58366.1 3 5 2241.1 92.02 HUMAN 1 -8.1379 -0.3073 AAVAPVLSINSDFSD-p Q9UJX2;S21-p AAVAPVLSINSDFSD 0.246862869444144 0.0808666583290622 -0.193 -0.325666666666667 11.6232416476661 14.4840688966335 -0.193 -0.325666666666667 0.0688138466380793 0.0356117331439738 -2.26568085099318 -2.78049789335321 Q9UJX2 CDC23 Q9UJX2.S21.p_CDC23 Q9UJX2_S21s _1_1_21_21 Q9UJX2 Q9UJX2|Q9UJX2-2|D6RCF8|D6RBY8 Cell division cycle protein 23 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36563.36563.4 19.89 19.89 2.164 7 1 1 0 992.7879 3888.1556 S21s Acetyl 2 (M) AASTSMVPVAVTAAVAPVLsINSDFSDLREIKK (Q) AAS(0.0)T(0.0)S(0.0)MVPVAVT(0.0)AAVAPVLS(0.99)INS(0.0)DFS(0.0)DLREIKK K:TMT10,s:Phosphorylated S CDC23 69631.7 1 2 2341.1 87.22 HUMAN 1 -11.6232 -14.4841 AAVDANASESP____-p Q9H8Y8-3;S461-p AAVDANASESP____ 0.976111830837964 0.164501803535279 0.00499999999999999 -0.140666666666667 0.205293934730412 10.3067499967821 0.00499999999999998 -0.140666666666667 0.953829184569736 0.0931804922351609 0.0606313476841587 -2.03420623415657 Q9H8Y8 GORASP2 Q9H8Y8.3.S461.p_GORASP2 Q9H8Y8-3_S461sS463s_2_2_461_463 Q9H8Y8-3 Q9H8Y8-3|Q9H8Y8-2 Isoform 3 of Golgi reassembly-stacking protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18932.18932.4 15.8 15.8 15.802 8 2 2 0 951.2024 3641.8547 S461s S463s TMT10 433 (K) APTTVEDRVGDSTPVSEKPVSAAVDANAsEsP (-) APT(0.0)T(0.0)VEDRVGDS(0.0)T(0.0)PVS(0.0)EKPVS(0.0)AAVDANAS(0.99)ES(0.99)P K:TMT10,s:Phosphorylated S GORASP2 48958.5 2 13 992.1 191.2 HUMAN 1 0.2053 -10.3067 AAVEAFYSPPSHDRP-p J3QK89;S706-p AAVEAFYSPPSHDRP 0.862058568456605 0.772997641235629 -0.0393333333333333 0.03 1.25897201363509 1.5473532329261 -0.0393333333333333 0.03 0.748346615144046 0.700268638150172 -0.337634098482943 0.406007594413784 J3QK89 NotFound J3QK89.S706.p_NotFound J3QK89_S706s _1_1_706_706 J3QK89 J3QK89|Q8IWX8 Calcium homeostasis endoplasmic reticulum protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26357.26357.4 20.53 20.53 4.57 3 1 1 0 584.5505 2255.2134 S706s TMT10 697 (R) LLAAVEAFYsPPSHDRPR (N) LLAAVEAFY(0.0)S(0.99)PPS(0.0)HDRPR s:Phosphorylated S CHERP 105388.1 7 2 2291.1 89.54 HUMAN 1 -1.259 1.5474 AAVGIPLSEDEAKVC-p P31939;S280-p AAVGIPLSEDEAKVC 0.263327632033978 0.184483737689394 0.200666666666667 0.192 10.9923723697258 9.65004430895022 0.200666666666667 0.192 0.0795724560515459 0.108391585529937 2.15477309963024 1.92022395516548 P31939 ATIC P31939.S280.p_ATIC P31939_S280s _1_1_280_280 P31939 P31939|P31939-2 Bifunctional purine biosynthesis protein PURH HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17391.17391.3 12.88 12.88 12.879 2 1 1 0 796.0889 2306.2756 S280s TMT10 267 (K) HVSPAGAAVGIPLsEDEAK (V) HVS(0.0)PAGAAVGIPLS(0.99)EDEAK K:TMT10,s:Phosphorylated S ATIC 65128.2 1 3 1978.1 104.52 HUMAN 1 10.9924 9.65 AAVLNGVS_______-p P51114;S621-p AAVLNGVS_______ 0.20627729049602 0.391932621862584 0.261666666666667 -0.0816666666666667 13.2566007189149 5.40828789555203 0.261666666666667 -0.0816666666666667 0.0472432675969581 0.287853298540551 2.55740945736686 -1.17812574805308 P51114 FXR1 P51114.S621.p_FXR1 P51114_S621s _1_1_621_621 P51114 P51114|B4DXZ6|P51114-3 Fragile X mental retardation syndrome-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21471.21471.3 20.41 17.66 20.408 3 1 1 0 856.782 2488.3659 S621s TMT10 603 (K) INTLKEENTQEAAVLNGVs (-) INT(0.0)LKEENT(0.0)QEAAVLNGVS(0.99) K:TMT10,s:Phosphorylated S FXR1 70061.9 1 6 553.1 273.48 HUMAN 1 13.2566 -5.4083 AAVPFLASDNEEEED-p O95714;S2928-p AAVPFLASDNEEEED 0.986625341798263 0.823062959616995 0.00266666666666666 -0.022 0.119076280954518 1.18558585279709 0.00266666666666666 -0.022 0.972954143445282 0.761099461595972 0.0354995923954164 -0.31977166433036 O95714 HERC2 O95714.S2928.p_HERC2 O95714_S2928s _1_1_2928_2928 O95714 O95714 E3 ubiquitin-protein ligase HERC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25428.25428.5 23.69 17.11 9.606 3 1 1 0 835.0104 4091.0457 S2928s TMT10 2913 (R) IRAEEEDLAAVPFLAsDNEEEEDEKGNSGSLIR (K) IRAEEEDLAAVPFLAS(0.99)DNEEEEDEKGNS(0.0)GS(0.0)LIR K:TMT10,s:Phosphorylated S HERC2 533836.7 12 7 552.1 274.16 HUMAN 1 0.1191 -1.1856 AAVPGALSPLAIPNA-p Q9UKA9-3;S313-p AAVPGALSPLAIPNA 0.412161436237322 0.0891269879954375 0.142666666666667 0.184333333333333 7.09894647610042 13.8953123372494 0.142666666666667 0.184333333333333 0.195031765597908 0.0407820230975003 1.47832239890266 2.67212927735734 Q9UKA9 PTBP2 Q9UKA9.3.S313.p_PTBP2 Q9UKA9-3_S313s _1_1_313_313 Q9UKA9-3 Q9UKA9-3|Q9UKA9-4|Q9UKA9-6 Isoform 3 of Polypyrimidine tract-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37560.37560.4 29.02 28.77 16.955 3 1 1 0 858.976 3352.9154 S313s TMT10 297 (K) ETSLLGLPVAAVPGALsPLAIPNAAAAAAAAAAGR (V) ET(0.0)S(0.0)LLGLPVAAVPGALS(0.99)PLAIPNAAAAAAAAAAGR s:Phosphorylated S PTBP2 58197.5 5 3 3032.1 62.69 HUMAN 1 7.0989 13.8953 AAVSKKASPEAASTP-p P29590-13;S403-p AAVSKKASPEAASTP 0.252902376172093 0.0128686511008283 0.165333333333333 0.529333333333333 11.3867332258428 26.330130309241 0.165333333333333 0.529333333333333 0.072665234165625 0.00232802140477343 2.22400582925109 5.38155251418722 P29590 PML P29590.13.S403.p_PML P29590-13_S403s _1_1_403_403 P29590-13 P29590-11|P29590-13|P29590-12|H3BT57 Isoform PML-13 of Protein PML HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18072.18072.4 23.09 22.49 2.223 7 1 1 0 924.4841 3614.948 S403s TMT10 401 (K) KAsPEAASTPRDPIDVDLDVSNTTTAQK (R) KAS(0.99)PEAAS(0.0)T(0.0)PRDPIDVDLDVS(0.0)NT(0.0)T(0.0)T(0.0)AQK K:TMT10,s:Phosphorylated S PML 87387.6 5 1 777.3 226.8 HUMAN 1 11.3867 26.3301 AAVTTPVTPAGHGHP-p Q9H4G0;T33-p AAVTTPVTPAGHGHP 0.452192101778898 0.247144118927688 -0.252 -0.130333333333333 6.35987560480525 7.99870062371663 -0.252 -0.130333333333333 0.23121310157163 0.158536745147588 -1.34842867895441 -1.63441724400715 Q9H4G0 EPB41L1 Q9H4G0.T33.p_EPB41L1 Q9H4G0_T33t _1_1_33_33 Q9H4G0 Q9H4G0|A0A0C4DH22 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9868.9868.5 23.11 23.11 2.219 4 1 1 0 866.8374 4250.2045 T33t TMT10 13 (K) KAQEEAPQQPEAAAAVTTPVtPAGHGHPEANSNEK (H) KAQEEAPQQPEAAAAVT(0.0)T(0.0)PVT(0.99)PAGHGHPEANS(0.0)NEK K:TMT10,t:Phosphorylated T EPB41L1 99071.6 1 2 174.1 483.37 HUMAN 1 -6.3599 -7.9987 AAWNHSASMEEEGED-p Q86V48;S1023-p AAWNHSASMEEEGED 0.878629426218163 0.206136847606035 -0.023 -0.142 1.1036160665926 9.02519804371021 -0.023 -0.142 0.775601058912787 0.125164219528231 -0.299671217478062 -1.81207111141692 Q86V48 LUZP1 Q86V48.S1023.p_LUZP1 Q86V48_S1023s _1_1_1023_1023 Q86V48 Q86V48 Leucine zipper protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24617.24617.4 25.52 25.52 2.54 7 1 1 0 884.9016 3456.5885 S1023s TMT10 1009 (R) VGDTITVAAWNHSAsMEEEGEDCTLSVYR (Q) VGDT(0.0)IT(0.0)VAAWNHS(0.0)AS(0.99)MEEEGEDCT(0.0)LS(0.0)VY(0.0)R C:Carbamidomethylation,s:Phosphorylated S LUZP1 120843.3 4 18 507.1 289.34 HUMAN 1 -1.1036 -9.0252 AAWRRRNTLQLHRYR-p P61313;T197-p AAWRRRNTLQLHRYR 0.222927229268876 0.0737907396976703 0.242666666666667 0.344 12.5375232504756 15.0260355635232 0.242666666666667 0.344 0.0557503598496149 0.031433768011376 2.42805539885982 2.88145131995473 P61313 RPL15 P61313.T197.p_RPL15 P61313_T197t _1_1_197_197 P61313 P61313 60S ribosomal protein L15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4641.4641.2 9.37 4.1 99 1 1 1 0 481.2347 881.4952 T197t Hydrogen 196 (R) NtLQLHR (Y) NT(1.0)LQLHR t:Phosphorylated T RPL15 24259.7 4 3 3377.1 52.5 HUMAN 1 12.5375 15.026 AAYGDLSSEEEEENE-p O15541;S85-p AAYGDLSSEEEEENE 0.89017987493411 0.0227731036088646 -0.022 0.346 0.986515434666998 22.4263620095952 -0.022 0.346 0.796798405863334 0.00571957552455357 -0.270492537519887 4.41532820105813 O15541 RNF113A O15541.S85.p_RNF113A O15541_S84sS85s_2_2_84_85 O15541 O15541 RING finger protein 113A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26599.26599.2 18.59 18.59 5.97 5 2 2 0 1631.722 3102.5043 S84s S85s TMT10 78 (K) AAYGDLssEEEEENEPESLGVVYK (S) AAY(0.0)GDLS(0.99)S(0.99)EEEEENEPES(0.0)LGVVY(0.0)K K:TMT10,s:Phosphorylated S RNF113A 39528.2 4 5 1876.1 109.61 HUMAN 1 -0.9865 22.4264 AAYGTHLSPHVPHRV-p P16144;S1474-p AAYGTHLSPHVPHRV 0.120581410713125 0.144233465453794 0.281666666666667 -0.152 19.0973962160314 11.0772630680802 0.281666666666667 -0.152 0.0123100659150846 0.0780321715801459 3.68786350777185 -2.16866507512086 P16144 ITGB4 P16144.S1474.p_ITGB4 P16144_S1474s _1_1_1474_1474 P16144 P16144|P16144-3|P16144-2|P16144-4 Integrin beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11184.11184.3 20.69 20.69 2.419 7 1 1 0 815.3942 2364.208 S1474s TMT10 1461 (R) MTTTSAAAYGTHLsPHVPHR (V) MT(0.0)T(0.0)T(0.0)S(0.0)AAAY(0.0)GT(0.0)HLS(0.99)PHVPHR s:Phosphorylated S ITGB4 205872.1 7 6 708.1 238.91 HUMAN 1 19.0974 -11.0773 AAYLKDGSKEPIVEM-p O15394;S765-p AAYLKDGSKEPIVEM 0.141525291296506 0.993374977882763 0.335666666666667 0.00200000000000004 17.3658437288368 0.0402692607909682 0.335666666666667 0.00200000000000007 0.0183406881741936 0.990770515624383 3.33504184418225 0.0121105810054395 O15394 NCAM2 O15394.S765.p_NCAM2 O15394_S765s _1_1_765_765 O15394 O15394|H9KV31 Neural cell adhesion molecule 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15305.15305.4 11.46 4.93 3.327 3 1 1 0 801.9196 3124.6916 S765s TMT10 758 (K) AAYLKDGsKEPIVEMRTEDER (V) AAY(0.0)LKDGS(0.99)KEPIVEMRT(0.0)EDER K:TMT10,s:Phosphorylated S NCAM2 93843.3 13 1 1267.1 160.16 HUMAN 1 17.3658 0.0403 AAYRAQPSASLGVGY-p Q96PK6;S254-p AAYRAQPSASLGVGY 0.906426058670281 0.626434449053383 -0.025 0.0643333333333334 0.838405163018314 2.76243725422308 -0.025 0.0643333333333333 0.824440814531886 0.529366280940132 -0.232837970822203 0.671643228290905 Q96PK6 RBM14 Q96PK6.S254.p_RBM14 Q96PK6_S254s _1_1_254_254 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12589.12589.3 7.83 7.83 1.237 3 1 1 0 505.5901 1434.7902 S254s TMT10 251 (R) AQPsASLGVGYR (T) AQPS(0.99)AS(0.0)LGVGY(0.0)R s:Phosphorylated S RBM14 69661.6 3 9 151.1 510.8 HUMAN 1 -0.8384 2.7624 ACAVLGGSDSEKCSY-p Q8N806;S41-p ACAVLGGSDSEKCSY 0.842210684381321 0.0111354218815931 -0.03 0.463666666666667 1.44102838407165 27.3556682138405 -0.03 0.463666666666667 0.717624341880671 0.00183837107679387 -0.381118854371822 5.65827405556688 Q8N806 UBR7 Q8N806.S41.p_UBR7 Q8N806_S41s _1_1_41_41 Q8N806 Q8N806|G3V253 Putative E3 ubiquitin-protein ligase UBR7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37917.37917.3 24.41 23.48 1.349 4 1 1 0 1452.6942 4276.0954 S41s TMT10 11 (R) QSELEPVVSLVDVLEEDEELENEACAVLGGsDSEK (C) QS(0.0)ELEPVVS(0.0)LVDVLEEDEELENEACAVLGGS(0.99)DS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UBR7 49367.3 4 1 1053.1 182.86 HUMAN 1 -1.441 27.3557 ACAVTDLSDDSDFDE-p Q9NQZ2;S365-p ACAVTDLSDDSDFDE 0.411970467877201 0.00747744438088099 0.117666666666667 0.48 7.10542856979359 30.4070818430302 0.117666666666667 0.48 0.194740886656638 0.000910524876543251 1.47945560220442 6.54637937820269 Q9NQZ2 UTP3 Q9NQZ2.S365.p_UTP3 Q9NQZ2_S365s _1_1_365_365 Q9NQZ2 Q9NQZ2 Something about silencing protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19782.19782.3 22.91 22.91 3.436 5 1 1 0 886.0639 2576.2074 S365s TMT10 354 (K) TSAAACAVTDLsDDSDFDEK (A) T(0.0)S(0.0)AAACAVT(0.0)DLS(0.99)DDS(0.0)DFDEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UTP3 54671.1 2 2 1963.1 105.04 HUMAN 1 7.1054 30.4071 ACDGDKESEVEDVET-p Q7Z3K6-2;S161-p ACDGDKESEVEDVET 0.822254013081849 0.0113988879289153 -0.033 -0.423 1.63604559739216 27.200795094768 -0.033 -0.423 0.686112671618273 0.0019051119032221 -0.4266031205066 -5.6158206435079 Q7Z3K6 MIER3 Q7Z3K6.2.S161.p_MIER3 Q7Z3K6-2_S161s _1_1_161_161 Q7Z3K6-2 Q7Z3K6-2|Q7Z3K6-3|Q7Z3K6-4 Isoform 2 of Mesoderm induction early response protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14109.14109.5 22.26 22.26 5.687 6 1 1 0 790.9681 3870.839 S161s TMT10 151 (R) SNTACDGDKEsEVEDVETDSGNSPEDLRK (E) S(0.0)NT(0.0)ACDGDKES(0.99)EVEDVET(0.0)DS(0.0)GNS(0.0)PEDLRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MIER3 62679.8 2 2 4175.1 36.08 HUMAN 1 -1.636 -27.2008 ACDKDGQTDSAAEES-p P55201-2;T864-p ACDKDGQTDSAAEES 0.304289476598221 0.143048100770644 0.171 0.167333333333333 9.6814005224254 11.1284970858453 0.171 0.170142286692134 0.107611812872052 0.0771170293138676 1.92640806607049 2.17764134210653 P55201 BRPF1 P55201.2.T864.p_BRPF1 P55201-2_T864tS866s_2_2_864_866 P55201-2 P55201-2|P55201-3|P55201-4 Isoform 2 of Peregrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10326.10326.4 19.7 19.7 2.573 9 2 2 0 985.4451 3778.8281 T864t S866s TMT10 849 (R) GSLTPHPAACDKDGQtDsAAEESSSQETSK (G) GS(0.0)LT(0.0)PHPAACDKDGQT(0.99)DS(0.99)AAEES(0.0)S(0.0)S(0.0)QET(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S BRPF1 139837.6 4 15 723.1 237.03 HUMAN 1 9.6814 11.1285 ACGLWGLSPASRKRY-p Q15637-6;S463-p ACGLWGLSPASRKRY 0.558609525843344 0.0214176435991247 0.0943333333333333 -0.315 4.66896358233813 22.8228878598581 0.0943333333333334 -0.315 0.341274344974699 0.00522048934870671 1.04302904072665 -4.50768428708739 Q15637 SF1 Q15637.6.S463.p_SF1 Q15637-6_S463s _1_1_463_463 Q15637-6 Q15637-6 Isoform 6 of Splicing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20449.20449.3 17.09 12.5 1.746 3 1 1 0 702.0352 2024.1152 S463s TMT10 455 (K) YACGLWGLsPASRK (R) Y(0.0)ACGLWGLS(0.99)PAS(0.0)RK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SF1 62173.2 6 9 1138.1 173.35 HUMAN 1 4.669 -22.8229 ACLEHRHSYVRRNAV-p P53618;S149-p ACLEHRHSYVRRNAV 0.993608271974075 0.142573832725068 0.00166666666666665 0.294 0.0592247972158571 11.1469447729668 0.00166666666666666 0.29627093339541 0.98645554931048 0.0767901511976289 0.0177747319247809 2.18087462031636 P53618 COPB1 P53618.S149.p_COPB1 P53618_S149s _1_1_149_149 P53618 P53618 Coatomer subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3241.3241.5 7.8 7.8 7.801 2 1 1 0 379.3914 1812.9601 S149s TMT10 142 (R) ACLEHRHsYVRR (N) ACLEHRHS(0.99)Y(0.0)VRR C:Carbamidomethylation,s:Phosphorylated S COPB1 108281.4 1 1 3508.1 49.52 HUMAN 1 0.0592 11.1469 ACPDLQLSAASVGNC-p E7ETA6;S776-p ACPDLQLSAASVGNC 0.795096933017678 0.0768324881105888 -0.0463333333333333 -0.205333333333333 1.92389053574712 14.7861705372312 -0.0463333333333333 -0.205333333333333 0.642112236851161 0.0332187239993719 -0.491880296813776 -2.83662392402643 E7ETA6 PCM1 E7ETA6.S776.p_PCM1 E7ETA6_S776s _1_1_776_776 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23355.23355.4 20.86 20.86 4.755 4 1 1 0 860.459 3358.843 S776s TMT10 763 (K) IQALQTACPDLQLsAASVGNCPTKK (Y) IQALQT(0.0)ACPDLQLS(0.99)AAS(0.0)VGNCPT(0.0)KK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCM1 229381.8 8 21 13.1 1159.95 HUMAN 1 -1.9239 -14.7862 ACPDSLGSPAPSHAY-p E9PNA7;S683-p ACPDSLGSPAPSHAY 0.367877784196778 0.833904504802687 0.164 -0.021 8.05550476728765 1.10536208707965 0.164 -0.021 0.156476644060397 0.775289301980608 1.64478786638246 -0.300072523329439 E9PNA7 NotFound E9PNA7.S683.p_NotFound E9PNA7_S683s _1_1_683_683 E9PNA7 Q5XXA6|Q5XXA6-2|E9PNA7 Anoctamin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15107.15107.3 16.47 16.47 5.829 4 1 1 0 768.0246 2222.0862 S683s TMT10 676 (K) ACPDSLGsPAPSHAYHGGVL (-) ACPDS(0.0)LGS(0.99)PAPS(0.0)HAY(0.0)HGGVL C:Carbamidomethylation,s:Phosphorylated S ANO1 81243.1 2 1 5222.1 21.61 HUMAN 1 8.0555 -1.1054 ACPVSLPSPPEASTL-p Q9H0F6;S146-p ACPVSLPSPPEASTL 0.316779561832275 0.0456921667392721 -0.139 -0.284 9.34810444930989 17.9317346827174 -0.139 -0.284 0.116195565810232 0.0161000243077466 -1.86863997261995 -3.44565548762835 Q9H0F6 SHARPIN Q9H0F6.S146.p_SHARPIN Q9H0F6_S146s _1_1_146_146 Q9H0F6 Q9H0F6|Q9H0F6-2 Sharpin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26205.26205.3 17.22 17.22 1.134 6 1 1 0 1047.8708 3061.628 S146s TMT10 129 (K) SNSPPALGPEACPVSLPsPPEASTLK (G) S(0.0)NS(0.0)PPALGPEACPVS(0.0)LPS(0.99)PPEAS(0.0)T(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SHARPIN 40519.1 2 3 2786.1 70.66 HUMAN 1 -9.3481 -17.9317 ACPYYHNSKDRRRSP-p Q9C0B0;S240-p ACPYYHNSKDRRRSP 0.130516047841302 0.323809145246767 0.498666666666667 -0.140333333333333 18.2912246521794 6.47600107199233 0.498666666666667 -0.140333333333333 0.0148210009387032 0.225112646025521 3.52144514369393 -1.36859057197317 Q9C0B0 UNK Q9C0B0.S240.p_UNK Q9C0B0_S240s _1_1_240_240 Q9C0B0 Q9C0B0 RING finger protein unkempt homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9767.9767.4 17.26 17.26 2.888 4 1 1 0 507.2378 1945.9631 S240s TMT10 230 (R) QGYACPYYHNsK (D) QGY(0.0)ACPY(0.0)Y(0.0)HNS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UNK 89851.6 10 4 1185.1 168.8 HUMAN 1 18.2912 -6.476 ACQAAKLSPRDTAKQ-p P49790-3;S718-p ACQAAKLSPRDTAKQ 0.849397707010341 0.00987532593183393 0.029 -0.599333333333333 1.37271436109944 28.2092691571612 0.029 -0.599333333333334 0.72900173829735 0.00151033429603769 0.364922850564557 -5.89663843161413 P49790 NUP153 P49790.3.S718.p_NUP153 P49790-3_S718s _1_1_718_718 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12111.12111.3 17.31 12.42 99 1 1 1 0 638.3354 1833.0239 S718s TMT10 709 (K) CIACQAAKLsPR (D) CIACQAAKLS(1.0)PR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NUP153 158989.2 12 30 64.1 696.53 HUMAN 1 1.3727 -28.2093 ACRNLMPSAGKAMHT-p P46013;S1291-p ACRNLMPSAGKAMHT 0.840000807577538 0.0236770721372945 -0.0326666666666667 -0.545666666666667 1.46263103302601 22.1689749600228 -0.0326666666666667 -0.545666666666667 0.714063602613246 0.0060687955093261 -0.386211225154023 -4.35602484614529 P46013 MKI67 P46013.S1291.p_MKI67 P46013_S1291s _1_1_1291_1291 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14840.14840.2 8.8 8.8 99 1 1 1 0 678.3624 1275.7495 S1291s TMT10 1287 (R) NLMPsAGK (A) NLMPS(1.0)AGK K:TMT10,s:Phosphorylated S MKI67 360912.4 2 36 5.1 1918.46 HUMAN 1 -1.4626 -22.169 ACRSRIPSPLQPEMQ-p Q96GY3;S182-p ACRSRIPSPLQPEMQ 0.629134056783656 0.0628028122827817 0.0733333333333333 0.214 3.73954874653748 16.0034967686013 0.0733333333333333 0.214 0.422712533908359 0.0250986477319719 0.867004791162093 3.06669422792326 Q96GY3 LIN37 Q96GY3.S182.p_LIN37 Q96GY3_S182s _1_1_182_182 Q96GY3 Q96GY3 Protein lin-37 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25347.25347.3 24.66 21.9 5.789 7 1 1 0 1129.851 3307.5675 S182s Hydrogen 180 (R) IPsPLQPEMQGTPDDEPSEPEPSPSTLIYR (N) IPS(0.99)PLQPEMQGT(0.0)PDDEPS(0.0)EPEPS(0.0)PS(0.0)T(0.0)LIY(0.0)R s:Phosphorylated S LIN37 28667.9 9 4 1804.1 113.98 HUMAN 1 3.7395 16.0035 ACSTLSLSGPELKQF-p Q8TF72;S1074-p ACSTLSLSGPELKQF 0.10854647135141 0.802205522043386 -0.296333333333333 0.0376666666666667 20.2118887772695 1.33928677361355 -0.296333333333333 0.0376666666666667 0.00952381876360523 0.734634504663727 -3.9245722596649 0.356908579166354 Q8TF72 SHROOM3 Q8TF72.S1074.p_SHROOM3 Q8TF72_S1074s _1_1_1074_1074 Q8TF72 Q8TF72 Protein Shroom3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21265.21265.3 16.21 13.11 1.379 4 1 1 0 634.334 1821.0192 S1074s TMT10 1067 (K) ACSTLSLsGPELK (Q) ACS(0.0)T(0.0)LS(0.0)LS(0.99)GPELK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SHROOM3 218451.1 1 44 90.2 622.62 HUMAN 1 -20.2119 1.3393 ACVQGRSTMTVSDAI-p Q9Y5W9;T144-p ACVQGRSTMTVSDAI 0.181080338359562 0.824824159835174 -0.222666666666667 -0.0246666666666666 14.6389413070304 1.17200487668063 -0.222666666666667 -0.0246666666666666 0.0343641708282678 0.763483247869405 -2.8110046157381 -0.316452493597326 Q9Y5W9 SNX11 Q9Y5W9.T144.p_SNX11 Q9Y5W9_T144t _1_1_144_144 Q9Y5W9 Q9Y5W9|Q9Y5W9-2 Sorting nexin-11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19887.19887.2 9.3 4.66 1.41 4 1 1 0 751.8781 1422.7824 T144t TMT10 143 (R) StMTVSDAILR (Y) S(0.0)T(0.99)MT(0.0)VS(0.0)DAILR t:Phosphorylated T SNX11 30889.3 2 1 2131.1 96.53 HUMAN 1 -14.6389 -1.172 ADAAMAASPHAVDGN-p Q13151;S68-p ADAAMAASPHAVDGN 0.743226288941802 0.0989759200122504 0.0526666666666667 0.327333333333333 2.44945451568301 13.2761611139846 0.0526666666666667 0.327333333333333 0.568924384627721 0.047030964863285 0.606186798115308 2.55951068564534 Q13151 HNRNPA0 Q13151.S68.p_HNRNPA0 Q13151_S68s _1_1_68_68 Q13151 Q13151 Heterogeneous nuclear ribonucleoprotein A0 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.23650.23685.5 26.69 26.69 3.096 5 1 1 0 819.7936 4014.973 S68s TMT10 49 (R) CFGFVTYSNVEEADAAMAAsPHAVDGNTVELKR (A) CFGFVT(0.0)Y(0.0)S(0.0)NVEEADAAMAAS(0.99)PHAVDGNT(0.0)VELKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HNRNPA0 31011.2 19 2 2372.1 86.26 HUMAN 1 2.4495 13.2762 ADAEKPFYVNVEFHH-p P11274;Y177-p ADAEKPFYVNVEFHH 0.952986039794177 0.233761451164787 -0.0213333333333333 0.263 0.412425055293391 8.31177667792383 -0.0213333333333333 0.263 0.909405328337211 0.147510295227087 -0.119215778636352 1.6886495049692 P11274 BCR P11274.Y177.p_BCR P11274_Y177y _1_1_177_177 P11274 P11274|P11274-2 Breakpoint cluster region protein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.13647.13647.5 35.09 30.49 99 1 1 1 0 704.1619 3436.8118 Y177y TMT10 163 (R) KGHGQPGADAEKPFyVNVEFHHER (G) KGHGQPGADAEKPFY(1.0)VNVEFHHER K:TMT10,y:Phosphorylated Y BCR 143843.8 7 1 24.1 68.46 HUMAN 1 -0.4124 8.3118 ADAFSPASVDNQLNA-p Q86X29-6;S96-p ADAFSPASVDNQLNA 0.64124158099539 0.473853416672925 -0.0873333333333333 0.088 3.60385195471106 4.32365965464927 -0.0873333333333334 0.0880000000000001 0.436128838199361 0.369516669184741 -0.840605299176099 0.978337873908409 Q86X29 LSR Q86X29.6.S96.p_LSR Q86X29-6_S96s_1_1_96_96 Q86X29-6 Q86X29|Q86X29-4|Q86X29-3|S4R3V8|Q86X29-2|Q86X29-5|Q86X29-6 Isoform 6 of Lipolysis-stimulated lipoprotein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29983.29983.4 10.42 10.42 1.967 5 1 1 0 1041.733 4080.9559 S96s N99n N102n N109n TMT10 88 (R) IADAFSPAsVDnQLnAQLAAGnPGYNPYVECQDSVR (T) IADAFS(0.0)PAS(0.99)VDN(0.99)QLN(0.99)AQLAAGN(0.99)PGY(0.0)N(0.0)PY(0.0)VECQDS(0.0)VR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated LSR 54725.6 1 1 206.1 448.79 HUMAN 1 -3.6039 4.3237 ADAKRIPSIVSSPLN-p P49790-3;S330-p ADAKRIPSIVSSPLN 0.459669547884547 0.135644418326948 0.105333333333333 0.180333333333333 6.22408079512109 11.4333934477481 0.105333333333333 0.180333333333333 0.238556865896141 0.0718887041566366 1.3243851849762 2.2311662124495 P49790 NUP153 P49790.3.S330.p_NUP153 P49790-3_S330s _1_1_330_330 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22905.22905.3 13.6 13.6 3.653 4 1 1 0 687.3746 1980.1439 S330s TMT10 327 (K) RIPsIVSSPLNSPLDR (S) RIPS(0.99)IVS(0.0)S(0.0)PLNS(0.0)PLDR s:Phosphorylated S NUP153 158989.2 4 13 64.1 696.53 HUMAN 1 6.2241 11.4334 ADALKLRSPRGSPDG-p Q8IZL8;S477-p ADALKLRSPRGSPDG 0.306383440584975 0.84731953172199 -0.177333333333333 0.0353333333333333 9.6284943913755 1.00969456466725 -0.177333333333333 0.0353333333333334 0.108930766818918 0.792557068333408 -1.91723316072605 0.27628119417353 Q8IZL8 PELP1 Q8IZL8.S477.p_PELP1 Q8IZL8_S477s _1_1_477_477 Q8IZL8 C9JFV4|Q8IZL8|E7EV54 Proline-, glutamic acid- and leucine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9413.9413.4 7.83 3.49 6.828 5 1 1 0 726.6562 2823.6408 S477s TMT10 475 (K) LRsPRGSPDGSLQTGKPSAPK (K) LRS(0.99)PRGS(0.0)PDGS(0.0)LQT(0.0)GKPS(0.0)APK K:TMT10,s:Phosphorylated S PELP1 120952.6 13 3 911.1 201.81 HUMAN 1 -9.6285 1.0097 ADALPEHSPAKTSAV-p Q8NDC0;S15-p ADALPEHSPAKTSAV 0.718243489759715 0.00970738203555996 -0.0543333333333334 -0.53 2.71224703643752 28.3492500519384 -0.0543333333333334 -0.53 0.535519508423546 0.00146242968782417 -0.661334870467243 -5.93644870386217 Q8NDC0 MAPK1IP1L Q8NDC0.S15.p_MAPK1IP1L Q8NDC0_S15s _1_1_15_15 Q8NDC0 Q8NDC0 MAPK-interacting and spindle-stabilizing protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23741.23741.3 21.61 21.61 10.637 3 1 1 0 828.4015 2403.2266 S15s TMT10 1 (-) MSDEFSLADALPEHsPAK (T) MS(0.0)DEFS(0.0)LADALPEHS(0.99)PAK K:TMT10,s:Phosphorylated S MAPK1IP1L 24325.7 9 2 3912.1 40.88 HUMAN 1 -2.7122 -28.3493 ADALTEPSPDIEGEI-p E7EVA0;S14-p ADALTEPSPDIEGEI 0.295019037798013 0.458343180291772 -0.196666666666667 -0.0706666666666666 9.99974408359225 4.5166950424921 -0.196666666666667 -0.0706666666666666 0.100005892866678 0.353452042565506 -1.98166599122511 -1.01450627470081 E7EVA0 NotFound E7EVA0.S14.p_NotFound E7EVA0_S14s _1_1_14_14 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2|P27816-5|P27816-7 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30850.30850.4 14.37 12.39 1.657 3 1 1 0 673.5883 2611.3664 S14s Acetyl 2 (M) ADLSLADALTEPsPDIEGEIKR (D) ADLS(0.0)LADALT(0.0)EPS(0.99)PDIEGEIKR K:TMT10,s:Phosphorylated S MAP4 246695.2 1 2 38.1 865.62 HUMAN 1 -9.9997 -4.5167 ADAPVLGSPEKEEAA-p O15234;S373-p ADAPVLGSPEKEEAA 0.820904102287946 0.170111781453783 -0.0413333333333334 -0.190666666666667 1.65205006940042 10.1137062599497 -0.0413333333333334 -0.190666666666667 0.683588885761008 0.0974157938552346 -0.430288744849909 -2.0006527986199 O15234 CASC3 O15234.S373.p_CASC3 O15234_S363sS373s_2_2_363_373 O15234 O15234 Protein CASC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17668.17668.5 25.81 22.93 2.993 5 2 2 0 1186.7996 5770.0179 S363s S373s TMT10 353 (R) RLEQTSVRDPsPEADAPVLGsPEKEEAASEPPAAAPDAAPPPPDRPIEK (K) RLEQT(0.0)S(0.0)VRDPS(0.99)PEADAPVLGS(0.99)PEKEEAAS(0.0)EPPAAAPDAAPPPPDRPIEK K:TMT10,s:Phosphorylated S CASC3 76390.7 2 14 323.1 362.08 HUMAN 1 -1.6521 -10.1137 ADAYMTRSLNPALDG-p O94967-4;S319-p ADAYMTRSLNPALDG 0.123743629200835 0.87633884012908 0.28 -0.0216666666666667 18.8733939419761 0.806125966139214 0.28 -0.0216666666666667 0.0129616594211425 0.830591348942984 3.64123121638477 -0.224492667437133 O94967 WDR47 O94967.4.S319.p_WDR47 O94967-4_S319s _1_1_319_319 O94967-4 O94967-4|O94967-3|A0A0A0MRE6|O94967-2 Isoform 4 of WD repeat-containing protein 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21312.21312.4 20.02 15.92 17.897 4 1 1 0 649.0872 2513.3546 S319s TMT10 319 (R) sLNPALDGLTCGLTSHDKR (I) S(0.99)LNPALDGLT(0.0)CGLT(0.0)S(0.0)HDKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WDR47 104479 2 4 1798.1 114.19 HUMAN 1 18.8734 -0.8061 ADDGPAPSGEEEGEG-p Q9UKN8;S19-p ADDGPAPSGEEEGEG 0.200797395490016 0.0908365247254202 0.231 -0.222666666666667 13.5509427331767 13.7797462466077 0.231 -0.222666666666667 0.0441474605027562 0.041881803547086 2.61083394775296 -2.65100783190243 Q9UKN8 GTF3C4 Q9UKN8.S19.p_GTF3C4 Q9UKN8_S19s _1_1_19_19 Q9UKN8 Q9UKN8|F2Z356 General transcription factor 3C polypeptide 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16437.16437.4 25.86 24.29 25.863 2 1 1 0 1043.988 4092.9423 S19s TMT10 9 (R) VGPADDGPAPsGEEEGEGGGEAGGKEPAADAAPGPSAAFR (L) VGPADDGPAPS(0.99)GEEEGEGGGEAGGKEPAADAAPGPS(0.0)AAFR K:TMT10,s:Phosphorylated S GTF3C4 93292.9 1 1 1958.1 105.19 HUMAN 1 13.5509 -13.7797 ADDGSLNTSGAGPKS-p Q9NWV8;T65-p ADDGSLNTSGAGPKS 0.744043857023488 0.760031763896837 -0.066 0.0346666666666667 2.43901165104539 1.64627035382621 -0.066 0.0346666666666667 0.570294042612332 0.684499231086392 -0.603969771206002 0.428911804241679 Q9NWV8 BABAM1 Q9NWV8.T65.p_BABAM1 Q9NWV8_S62sT65t_2_2_62_65 Q9NWV8 Q9NWV8|J3KQS6|Q9NWV8-3|M0QXG9 BRISC and BRCA1-A complex member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11222.11222.3 13.99 13.99 1.102 5 2 2 0 909.0582 2565.2317 S62s T65t TMT10 49 (R) SEGEGEAASADDGsLNtSGAGPK (S) S(0.0)EGEGEAAS(0.0)ADDGS(0.99)LNT(0.99)S(0.0)GAGPK K:TMT10,s:Phosphorylated S,t:Phosphorylated T BABAM1 37072.9 3 7 1373.1 148.88 HUMAN 1 -2.439 1.6463 ADDGTTRSPSIDSIQ-p Q99569;S510-p ADDGTTRSPSIDSIQ 0.324862200674079 0.0406826297871355 0.139666666666667 0.247 9.14799971652153 18.6413036852939 0.139666666666667 0.247 0.121674628340021 0.0136731831603856 1.83398546556668 3.59016368589087 Q99569 PKP4 Q99569.S510.p_PKP4 Q99569_S510s _1_1_510_510 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13810.13810.3 19.25 19.25 1.162 5 1 1 0 958.831 2794.5099 S510s TMT10 497 (R) LQHAVPADDGTTRsPSIDSIQK (D) LQHAVPADDGT(0.0)T(0.0)RS(0.99)PS(0.0)IDS(0.0)IQK K:TMT10,s:Phosphorylated S PKP4 132664.7 6 19 122.1 546.31 HUMAN 1 9.148 18.6413 ADDICDHTLEQQQMQ-p Q13137-4;T433-p ADDICDHTLEQQQMQ 0.278454073803386 0.198738550668703 -0.156333333333333 -0.136333333333333 10.5039246745614 9.23458202230726 -0.156333333333333 -0.136333333333333 0.089044588764107 0.119272905205933 -2.06941181776762 -1.84829408028347 Q13137 CALCOCO2 Q13137.4.T433.p_CALCOCO2 Q13137-4_T433t_1_1_433_433 Q13137-4 Q13137-4|Q13137-3|Q13137-2|Q13137-5 Isoform 4 of Calcium-binding and coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23007.23007.4 16.43 16.43 99 1 1 1 0 944.6677 3694.6833 T433t N445n TMT10 426 (K) ADDICDHtLEQQQMQPLCFnCPICDK (I) ADDICDHT(1.0)LEQQQMQPLCFN(1.0)CPICDK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,n:Deamidated CALCOCO2 55986 1 7 1533.1 133.47 HUMAN 1 -10.5039 -9.2346 ADDLEVSSDIIEAVA-p P50851;S1052-p ADDLEVSSDIIEAVA 0.36859263142928 0.0239883469197655 -0.185333333333333 0.344666666666667 8.03615361384738 22.0841374008087 -0.185333333333333 0.344666666666667 0.157175423286597 0.0061885123207635 -1.64143173497098 4.33658750753088 P50851 LRBA P50851.S1052.p_LRBA P50851_S1052s _1_1_1052_1052 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36961.36961.3 24.53 23.8 1.453 7 1 1 0 1112.223 3254.7044 S1052s TMT10 1044 (R) NADDLEVSsDIIEAVAISSNSFITTGK (D) NADDLEVS(0.0)S(0.99)DIIEAVAIS(0.0)S(0.0)NS(0.0)FIT(0.0)T(0.0)GK K:TMT10,s:Phosphorylated S LRBA 321783.7 13 6 74.1 649.16 HUMAN 1 -8.0362 22.0841 ADDTYTESYISTIGV-p Q9H0U4;S36-p ADDTYTESYISTIGV 0.592062917051146 0.0153216218977691 0.101 0.360333333333333 4.19394513570008 25.1031648761772 0.101 0.360333333333333 0.38071981997259 0.00308804423200697 0.954025550133553 5.06359878015729 Q9H0U4 RAB1B Q9H0U4.S36.p_RAB1B Q9H0U4_S36s _1_1_36_36 Q9H0U4 P62820|Q9H0U4|E9PLD0|P62820-3 Ras-related protein Rab-1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31841.32477.3 19.01 19.01 1.184 7 1 1 0 904.103 2630.3278 S36s TMT10 28 (R) FADDTYTEsYISTIGVDFK (I) FADDT(0.0)Y(0.0)T(0.0)ES(0.99)Y(0.0)IS(0.0)T(0.0)IGVDFK K:TMT10,s:Phosphorylated S RAB1B 22341.9 1 20 2008.2 102.72 HUMAN 1 4.1939 25.1032 ADDYFEHSPLSEDRF-p Q02078-2;S108-p ADDYFEHSPLSEDRF 0.415197172610023 0.0274849068251649 0.119333333333333 0.306 7.04299358968763 21.1692998492082 0.119333333333333 0.306 0.197560738548419 0.00763958935807883 1.46853693422966 4.13035372636708 Q02078 MEF2A Q02078.2.S108.p_MEF2A Q02078-2_S98sS108s_2_2_98_108 Q02078-2 Q02078-2|Q02078-6|Q02078-4|Q02078-7|Q02078-8 Isoform MEFA of Myocyte-specific enhancer factor 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21053.21053.5 22.98 22.98 3.156 5 2 2 0 718.9091 3430.5898 S98s S108s TMT10 92 (K) GLNGCEsPDADDYFEHsPLSEDRFSK (L) GLNGCES(0.99)PDADDY(0.0)FEHS(0.99)PLS(0.0)EDRFS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MEF2A 54612.1 5 9 2279.1 89.95 HUMAN 1 7.043 21.1693 ADEALEISQAQLLFE-p Q8IY81;S549-p ADEALEISQAQLLFE 0.634503917129935 0.178464205588341 -0.0833333333333334 0.178666666666667 3.68037087928168 9.84656869706765 -0.0833333333333334 0.178666666666667 0.428511924726151 0.103596034190806 -0.855516875600477 1.95428945186537 Q8IY81 FTSJ3 Q8IY81.S549.p_FTSJ3 Q8IY81_S549s _1_1_549_549 Q8IY81 Q8IY81 pre-rRNA processing protein FTSJ3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.34606.34606.4 23.7 23.7 10.835 2 1 1 0 787.6232 3067.5058 S549s TMT10 533 (K) GSFAGIEDDADEALEIsQAQLLFENR (R) GS(0.0)FAGIEDDADEALEIS(0.99)QAQLLFENR s:Phosphorylated S FTSJ3 96956.1 3 2 631.1 257.01 HUMAN 1 -3.6804 9.8466 ADEEEEDSDDDVEPI-p P54105;S102-p ADEEEEDSDDDVEPI 0.810764534918603 0.79880225423228 -0.0753333333333333 0.036 1.75010696589933 1.36387295449804 -0.0753333333333333 0.036 0.668327456588612 0.730487358379463 -0.452721626351237 0.362778565310616 P54105 CLNS1A P54105.S102.p_CLNS1A P54105_S102s _1_1_102_102 P54105 P54105|E9PJF4 Methylosome subunit pICln HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22647.22855.4 24.69 24.69 8.256 3 1 1 0 963.9263 3772.7125 S102s TMT10 86 (K) FEEESKEPVADEEEEDsDDDVEPITEFR (F) FEEES(0.0)KEPVADEEEEDS(0.99)DDDVEPIT(0.0)EFR K:TMT10,s:Phosphorylated S CLNS1A 26386 5 1 2412.1 84.59 HUMAN 1 -1.7501 1.3639 ADEEIPRSPFKVKVL-p O75369-8;S1536-p ADEEIPRSPFKVKVL 0.131009621387088 0.063731285855024 -0.282 -0.226 18.2507235799821 15.9190617638788 -0.282 -0.226 0.0149598638836728 0.0255913869545412 -3.51318577185101 -3.05052268679398 O75369 FLNB O75369.8.S1536.p_FLNB O75369-8_S1536s _1_1_1536_1536 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|O75369-4|O75369-5 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16497.16497.3 16.38 16.38 16.384 2 1 1 0 664.0079 1910.0424 S1536s TMT10 1528 (K) YADEEIPRsPFK (V) Y(0.0)ADEEIPRS(0.99)PFK K:TMT10,s:Phosphorylated S FLNB 283797.6 5 27 67.1 680.07 HUMAN 1 -18.2507 -15.9191 ADEGESESEDDDLKP-p Q9Y2K6;S134-p ADEGESESEDDDLKP 0.916145150674614 0.567256674998913 0.0173333333333333 0.064 0.742538039186788 3.32027149323302 0.0173333333333333 0.064 0.842842052597956 0.465556988957241 0.207988509543386 0.784628018641111 Q9Y2K6 USP20 Q9Y2K6.S134.p_USP20 Q9Y2K6_S132sS134s_2_2_132_134 Q9Y2K6 Q9Y2K6 Ubiquitin carboxyl-terminal hydrolase 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22191.22191.4 18.5 18.5 99 2 2 2 0 740.8456 2800.4253 S132s S134s TMT10 121 (K) AVPIAVADEGEsEsEDDDLKPR (G) AVPIAVADEGES(1.0)ES(1.0)EDDDLKPR K:TMT10,s:Phosphorylated S USP20 103827 2 10 1704.1 120.18 HUMAN 1 0.7425 3.3203 ADEHVPGSPFTVKIS-p O75369-8;S2114-p ADEHVPGSPFTVKIS 0.807840650085328 0.879008015332964 0.0473333333333333 -0.0383333333333333 1.77934359202139 0.785985376488505 0.0473333333333333 -0.0383333333333333 0.663843398449479 0.8344521968355 0.459361971152938 -0.21927755621619 O75369 FLNB O75369.8.S2114.p_FLNB O75369-8_S2114s _1_1_2114_2114 O75369-8 O75369-8 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21285.21285.3 12.42 12.42 4.359 2 1 1 0 690.3536 1989.0846 S2114s TMT10 2106 (K) FADEHVPGsPFTVK (I) FADEHVPGS(0.99)PFT(0.0)VK K:TMT10,s:Phosphorylated S FLNB 283797.6 1 34 67.1 680.07 HUMAN 1 1.7793 -0.786 ADEIANSSGKGALAL-p P35579;S1714-p ADEIANSSGKGALAL 0.768059048929508 0.290567454409063 0.0556666666666667 0.109 2.19600390507348 7.08322362038009 0.0556666666666667 0.109 0.60311427731145 0.19573912291479 0.551783907869334 1.47516092637008 P35579 MYH9 P35579.S1714.p_MYH9 P35579_S1714s _1_1_1714_1714 P35579 P35579|P35579-2 Myosin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11364.11364.3 17.98 17.98 1.148 2 1 1 0 800.0401 2318.1422 S1714s Hydrogen 1698 (R) QAQQERDELADEIANSsGK (G) QAQQERDELADEIANS(0.0)S(0.99)GK K:TMT10-Lys-Only,s:Phosphorylated S MYH9 227783.5 11 33 296.1 379.15 HUMAN 1 2.196 7.0832 ADEKGNDSDGEGESD-p O75351;S102-p ADEKGNDSDGEGESD 0.386150789195061 0.017356728506643 -0.298 0.335 7.65014659013639 24.284021778147 -0.298 0.335 0.17178504024985 0.00372904669988336 -1.57440483562749 4.85885798333264 O75351 VPS4B O75351.S102.p_VPS4B O75351_S102s _1_1_102_102 O75351 O75351|K7EKZ3 Vacuolar protein sorting-associated protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8620.8620.5 26.24 19.38 4.379 3 1 1 0 894.0506 4386.2558 S102s TMT10 83 (K) AQKPVKEGQPSPADEKGNDsDGEGESDDPEK (K) AQKPVKEGQPS(0.0)PADEKGNDS(0.99)DGEGES(0.0)DDPEK K:TMT10,s:Phosphorylated S VPS4B 49472.3 20 2 757.1 230.65 HUMAN 1 -7.6501 24.284 ADEQLKQSLSEMEET-p Q2LD37;S679-p ADEQLKQSLSEMEET 0.204019640308666 0.012159953222783 -0.299 0.398333333333333 13.3727893706818 26.7369343276959 -0.299 0.398333333333333 0.045996105658803 0.00211985700820833 -2.5784635948276 5.49009137402798 Q2LD37 KIAA1109 Q2LD37.S679.p_KIAA1109 Q2LD37_S679s _1_1_679_679 Q2LD37 Q2LD37 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33890.33890.4 13.29 5.99 2.2 5 1 1 0 911.9766 3564.922 S679s TMT10 672 (K) ADEQLKQsLSEMEETMLSVLRPSQK (T) ADEQLKQS(0.99)LS(0.0)EMEET(0.0)MLS(0.0)VLRPS(0.0)QK K:TMT10,s:Phosphorylated S KIAA1109 559693.9 2 2 143.1 520.8 HUMAN 1 -13.3728 26.7369 ADEVRRKSLVLKFPK-p P21675-4;S1340-p ADEVRRKSLVLKFPK 0.992821359885708 0.00526062627901912 0.00166666666666666 -0.74 0.0653026219168496 33.1254010827988 0.00166666666666666 -0.74 0.985075999064376 0.000486922554463393 0.019585412886291 -7.42893050362447 P21675 TAF1 P21675.4.S1340.p_TAF1 P21675-4_S1340s _1_1_1340_1340 P21675-4 P21675-4|P21675-12|P21675-2|P21675-9|P21675-5|P21675-3|Q8IZX4|P21675-7|P21675-6 Isoform 4 of Transcription initiation factor TFIID subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23252.23252.3 11.49 11.49 99 1 1 1 0 567.022 1619.0863 S1340s TMT10 1340 (K) sLVLKFPK (Q) S(1.0)LVLKFPK K:TMT10,s:Phosphorylated S TAF1 217873.7 2 7 1230.1 163.84 HUMAN 1 0.0653 -33.1254 ADFGAAGSPRPLGRL-p Q86UD0;S284-p ADFGAAGSPRPLGRL 0.745371790338934 0.0137666211706542 -0.058 -0.437333333333333 2.42176300293889 25.85357152023 -0.058 -0.437333333333333 0.572563553672594 0.0025980221413416 -0.600303410429546 -5.25640517291181 Q86UD0 SAPCD2 Q86UD0.S284.p_SAPCD2 Q86UD0_S284s _1_1_284_284 Q86UD0 Q86UD0 Suppressor APC domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11428.11428.3 12.1 12.1 4.068 2 1 1 0 613.6424 1758.9448 S284s TMT10 275 (R) ASADFGAAGsPRPLGR (L) AS(0.0)ADFGAAGS(0.99)PRPLGR s:Phosphorylated S SAPCD2 43092.2 2 3 2772.1 71.2 HUMAN 1 -2.4218 -25.8536 ADFQNSQSPVQDQDK-p P78332;S362-p ADFQNSQSPVQDQDK 0.0949352610946194 0.443227943427826 0.450333333333333 0.123666666666667 21.6783391927121 4.70519833156958 0.450333333333333 0.123666666666667 0.00679463419951504 0.33843881584809 4.24875873653711 1.04954461401093 P78332 RBM6 P78332.S362.p_RBM6 P78332_S360sS362s_2_2_360_362 P78332 P78332|E9PGM9|F8WCA5|P78332-3 RNA-binding protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14864.14864.4 8 8 1.134 4 2 2 0 956.4196 3662.7247 S360s S362s TMT10 341 (R) EGETQGVAFEHESPADFQNsQsPVQDQDK (S) EGET(0.0)QGVAFEHES(0.0)PADFQNS(0.99)QS(0.99)PVQDQDK K:TMT10,s:Phosphorylated S RBM6 129269.2 1 6 1383.1 148.19 HUMAN 1 21.6783 4.7052 ADGDSKGSEEVDSHC-p Q9Y4W2;S249-p ADGDSKGSEEVDSHC 0.461535694452753 0.00430710892012816 -0.221666666666667 0.777 6.19119066529368 34.7703689866004 -0.221666666666667 0.777 0.240370370829338 0.000333398085290207 -1.31855199990314 8.01005964456495 Q9Y4W2 LAS1L Q9Y4W2.S249.p_LAS1L Q9Y4W2_S246sS249s_2_2_246_249 Q9Y4W2 Q9Y4W2|Q9Y4W2-2|Q9Y4W2-3|Q9Y4W2-4 Ribosomal biogenesis protein LAS1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8299.8299.5 9.12 9.12 2.411 6 2 2 0 780.9867 3740.9622 S246s S249s TMT10 235 (K) STESDVKADGDsKGsEEVDSHCKK (A) S(0.0)T(0.0)ES(0.0)DVKADGDS(0.99)KGS(0.99)EEVDS(0.0)HCKK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S LAS1L 84033.3 1 7 1725.1 119.4 HUMAN 1 -6.1912 34.7704 ADGHLSDSDDYSELC-p A8K0R7-5;S280-p ADGHLSDSDDYSELC 0.114688242267433 0.224470085056243 0.383 0.126666666666667 19.5711025712127 8.54471485401676 0.383 0.126666666666667 0.011037983559702 0.139806870571049 3.78750296173388 1.72896110065841 A8K0R7 ZNF839 A8K0R7.5.S280.p_ZNF839 A8K0R7-5_S278sS280s_2_2_278_280 A8K0R7-5 A8K0R7-5|A8K0R7-2 Isoform 3 of Zinc finger protein 839 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21372.21372.4 8.1 8.1 2.92 5 2 2 0 1109.2299 4273.9719 S278s S280s TMT10 266 (K) FIKTEDLADGHLsDsDDYSELCVEEDEDQRER (H) FIKT(0.0)EDLADGHLS(0.99)DS(0.99)DDY(0.0)S(0.0)ELCVEEDEDQRER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF839 100640.4 1 5 2399.1 85.2 HUMAN 1 19.5711 8.5447 ADGKKGNSPNSEPPT-p P48634;S380-p ADGKKGNSPNSEPPT 0.43560780691917 0.0207694246767137 -0.174666666666667 0.364666666666667 6.64544466071729 23.0142275443376 -0.174666666666667 0.364666666666667 0.216498820149907 0.00499548024161132 -1.39879598091881 4.55268855571953 P48634 PRRC2A P48634.S380.p_PRRC2A P48634_S380s _1_1_380_380 P48634 P48634|P48634-3|P48634-2|P48634-4 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7757.8176.2 14.86 14.86 1.107 3 1 1 0 881.9412 1682.9114 S380s TMT10 378 (K) GNsPNSEPPTPK (T) GNS(0.99)PNS(0.0)EPPT(0.0)PK K:TMT10,s:Phosphorylated S PRRC2A 229315.4 9 6 36.1 882.05 HUMAN 1 -6.6454 23.0142 ADGKPRLSLHEEEGS-p Q12955;S4342-p ADGKPRLSLHEEEGS 0.0866557243462627 0.370964238400601 -0.48 0.096 22.7102862733305 5.71253939215589 -0.48 0.096 0.00535761340638551 0.268377473900539 -4.48627130139474 1.23290052277828 Q12955 ANK3 Q12955.S4342.p_ANK3 Q12955_S4342s _1_1_4342_4342 Q12955 Q12955|Q12955-4|Q12955-5|Q12955-7|Q12955-6 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10449.10449.5 15.37 15.37 1.356 6 1 1 0 659.5383 3213.6955 S4342s TMT10 4332 (R) TSPADGKPRLsLHEEEGSSGSEQK (Q) T(0.0)S(0.0)PADGKPRLS(0.99)LHEEEGS(0.0)S(0.0)GS(0.0)EQK K:TMT10,s:Phosphorylated S ANK3 482683.6 3 33 135.1 530.51 HUMAN 1 -22.7103 5.7125 ADHLEGLSSDDEETS-p Q9Y5B6;S557-p ADHLEGLSSDDEETS 0.870861616619807 0.111189667466433 0.0273333333333333 0.215666666666667 1.17650564897014 12.5931604100113 0.0273333333333333 0.215666666666667 0.762692428636696 0.0550407013230234 0.317585245720799 2.436721287363 Q9Y5B6 PAXBP1 Q9Y5B6.S557.p_PAXBP1 Q9Y5B6_S557sS558s_2_2_557_558 Q9Y5B6 Q9Y5B6|Q9Y5B6-2 PAX3- and PAX7-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24866.24866.4 17.18 17.18 3.02 6 2 2 0 887.1371 3369.6044 M549m S557s S558s TMT10 549 (K) mADHLEGLssDDEETSTDITNFNLEK (D) M(1.0)ADHLEGLS(0.99)S(0.99)DDEET(0.0)S(0.0)T(0.0)DIT(0.0)NFNLEK K:TMT10,m:Oxidized methionine,s:Phosphorylated S PAXBP1 105258.2 21 10 978.1 192.69 HUMAN 1 1.1765 12.5932 ADHMKRKSEASSEFA-p Q92620;S513-p ADHMKRKSEASSEFA 0.789534097325871 0.00396952213808427 0.0426666666666667 -0.743333333333333 1.98031915239237 35.4020203776652 0.0426666666666667 -0.743333333333333 0.633823131433765 0.000288269013731618 0.504439151221581 -8.24339489033924 Q92620 DHX38 Q92620.S513.p_DHX38 Q92620_S513s _1_1_513_513 Q92620 Q92620 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7591.7591.4 7.9 7.9 2.629 3 1 1 0 502.5261 1927.1216 S513s TMT10 511 (K) RKsEASSEFAK (K) RKS(0.99)EAS(0.0)S(0.0)EFAK K:TMT10,s:Phosphorylated S DHX38 141356.1 1 1 4343.1 33.14 HUMAN 1 1.9803 -35.402 ADHSMAQTPRLIDGI-p P08240;T578-p ADHSMAQTPRLIDGI 0.572719143373661 0.814292356082223 0.216333333333333 -0.045 4.45625481123766 1.24915055389362 0.216333333333333 -0.045 0.358405378903075 0.750040897131293 1.00339867086855 -0.335223999837901 P08240 SRPR P08240.T578.p_SRPR P08240_T578t _1_1_578_578 P08240 P08240|P08240-2 Signal recognition particle receptor subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6697.6697.3 9.87 9.87 2.766 2 1 1 0 536.2582 1526.7947 T578t TMT10 569 (R) ALADHSMAQtPR (L) ALADHS(0.0)MAQT(0.99)PR t:Phosphorylated T SRPRA 70266.4 1 9 1857.1 110.87 HUMAN 1 4.4563 -1.2492 ADIFTDESEDDRDSC-p Q6UB99;S1123-p ADIFTDESEDDRDSC 0.781374547736925 0.339520804250534 -0.0403333333333333 0.102 2.05867328678894 6.21417615730176 -0.0403333333333333 0.102 0.62249041886047 0.239101546028862 -0.52175680634962 1.32230380928527 Q6UB99 ANKRD11 Q6UB99.S1123.p_ANKRD11 Q6UB99_S1123s_1_1_1123_1123 Q6UB99 Q6UB99 Ankyrin repeat domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30582.30582.3 10.52 10.52 10.518 6 1 1 0 1162.5078 3389.5342 S1123s M1131m TMT10 1112 (K) SWYIADIFTDEsEDDRDSCmGSGFK (M) S(0.0)WY(0.0)IADIFT(0.0)DES(0.99)EDDRDS(0.0)CM(1.0)GS(0.0)GFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,m:Oxidized methionine ANKRD11 299790.8 1 15 340.1 353.72 HUMAN 1 -2.0587 6.2142 ADIGKKHSDPHLLER-p Q9Y6M7-13;S251-p ADIGKKHSDPHLLER 0.292782658195601 0.0251249872477674 -0.189666666666667 -0.326 10.0638251801538 21.7696792417781 -0.189666666666667 -0.326 0.0985411172562328 0.00665322293302026 -1.9928012949783 -4.26500926997857 Q9Y6M7 SLC4A7 Q9Y6M7.13.S251.p_SLC4A7 Q9Y6M7-13_S251s_1_1_251_251 Q9Y6M7-13 Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-9|Q9Y6M7-2|Q9Y6M7-3|Q9Y6M7-4 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14744.14744.5 15.45 15.45 2.996 4 1 1 0 753.6014 3683.0232 S251s N259n TMT10 249 (K) KHsDPHLLERnGILASPQSAPGNLDNSK (S) KHS(0.99)DPHLLERN(0.99)GILAS(0.0)PQS(0.0)APGN(0.0)LDN(0.0)S(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated SLC4A7 128884.6 13 6 207.1 445.25 HUMAN 1 -10.0638 -21.7697 ADIPINISETDLSLL-p P21333-2;S1968-p ADIPINISETDLSLL 0.797289518920796 0.0503593127560127 0.0363333333333333 0.269333333333333 1.89877952454719 17.3461762261941 0.0363333333333333 0.269333333333333 0.645835699420597 0.0184239343475845 0.4862674983562 3.32853011272248 P21333 FLNA P21333.2.S1968.p_FLNA P21333-2_S1968s _1_1_1968_1968 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34311.34311.4 22.58 22.58 1.128 7 1 1 0 1115.104 4377.4104 S1968s TMT10 1957 (K) VGSAADIPINIsETDLSLLTATVVPPSGREEPCLLKR (L) VGS(0.0)AADIPINIS(0.99)ET(0.0)DLS(0.0)LLT(0.0)AT(0.0)VVPPS(0.0)GREEPCLLKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FLNA 282751.6 4 14 198.1 454.47 HUMAN 1 1.8988 17.3462 ADIPVKSSPQAAVPY-p Q9H2P0;S608-p ADIPVKSSPQAAVPY 0.0787840769166688 0.0308357763925434 -0.547666666666667 -0.403666666666667 23.54684303035 20.4231511764774 -0.547666666666667 -0.403666666666667 0.00441891550050466 0.00907162067952951 -4.68490364352898 -3.9665451161331 Q9H2P0 ADNP Q9H2P0.S608.p_ADNP Q9H2P0_S608s _1_1_608_608 Q9H2P0 Q9H2P0 Activity-dependent neuroprotector homeobox protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11721.11721.2 12.24 12.24 1.114 3 1 1 0 972.0514 1863.1307 S608s TMT10 607 (K) SsPQAAVPYKK (D) S(0.0)S(0.99)PQAAVPY(0.0)KK K:TMT10,s:Phosphorylated S ADNP 124930 6 6 276.1 391.38 HUMAN 1 -23.5468 -20.4232 ADITGRYSNRLYAYE-p B5MC07;S146-p ADITGRYSNRLYAYE 0.202791717001177 0.679809899260367 -0.336 0.048 13.442251167983 2.29054728905016 -0.336 0.048 0.0452662881012023 0.590126708921387 -2.59107198511249 0.572155828451319 B5MC07 NotFound B5MC07.S146.p_NotFound B5MC07_S146s _1_1_146_146 B5MC07 B5MC07|O95994 Anterior gradient protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6028.6028.3 11.56 5.83 2.244 3 1 1 0 487.9059 1381.7385 S146s TMT10 139 (R) ADITGRYsNR (L) ADIT(0.0)GRY(0.0)S(0.99)NR s:Phosphorylated S AGR2 21847.8 1 1 6457.1 11.56 HUMAN 1 -13.4423 2.2905 ADKEINKSGEKAM__-p Q9BVG4;S228-p ADKEINKSGEKAM__ 0.0897340370396671 0.0233132243253702 0.626333333333333 -0.448666666666667 22.2997099057791 22.2780351982054 0.626333333333334 -0.448666666666667 0.00588882989460391 0.00591829324502718 4.39080386837467 -4.3810915519708 Q9BVG4 PBDC1 Q9BVG4.S228.p_PBDC1 Q9BVG4_S228s _1_1_228_228 Q9BVG4 Q9BVG4 Protein PBDC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7699.7699.4 9.04 9.04 99 1 1 1 0 690.4003 2678.6061 S228s TMT10 218 (K) GKEADKEINKsGEK (A) GKEADKEINKS(1.0)GEK K:TMT10,s:Phosphorylated S PBDC1 26170.4 1 3 2277.1 89.97 HUMAN 1 22.2997 -22.278 ADKESEVSPSRRRKM-p Q86SQ7;S92-p ADKESEVSPSRRRKM 0.612310168463098 0.604511211545118 0.0866666666666667 -0.05 3.94941952776092 2.96589257794289 0.0866666666666667 -0.05 0.402770864547002 0.505138816289252 0.907448695627376 -0.713376669447651 Q86SQ7 SDCCAG8 Q86SQ7.S92.p_SDCCAG8 Q86SQ7_S92s _1_1_92_92 Q86SQ7 Q86SQ7|Q86SQ7-4|Q86SQ7-3|Q86SQ7-2 Serologically defined colon cancer antigen 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5087.5087.2 15.13 12.31 1.777 3 1 1 0 999.9987 1919.0234 S92s TMT10 83 (R) QQADKESEVsPSR (R) QQADKES(0.0)EVS(0.99)PS(0.0)R K:TMT10,s:Phosphorylated S SDCCAG8 83479.3 4 2 3737.1 44.2 HUMAN 1 3.9494 -2.9659 ADKGVALSLDDVKRH-p P78348-1;S533-p ADKGVALSLDDVKRH 0.616476954850871 0.0519260893065422 -0.073 -0.621333333333333 3.89780267327355 17.1441240898592 -0.073 -0.621333333333333 0.407586445300854 0.0193013457760165 -0.897543419952352 -3.28854294819561 P78348 ASIC1 P78348.1.S533.p_ASIC1 P78348-1_S533s _1_1_533_533 P78348-1 P78348-1|P78348-3 Isoform 1 of Acid-sensing ion channel 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18377.18377.3 10.24 10.24 99 1 1 1 0 570.9901 1630.9892 S533s TMT10 529 (K) GVALsLDDVKR (H) GVALS(1.0)LDDVKR K:TMT10,s:Phosphorylated S ASIC1 66265.4 1 1 6669.1 10.24 HUMAN 1 -3.8978 -17.1441 ADKRKSGSQDFPQCN-p P28290;S593-p ADKRKSGSQDFPQCN 0.736114472859428 0.0849845667078876 0.059 -0.309 2.5210601142561 14.1692761014829 0.059 -0.309 0.559620981156032 0.0382888559315657 0.621334629946871 -2.7223940224949 P28290 SSFA2 P28290.S593.p_SSFA2 P28290_S593s _1_1_593_593 P28290 P28290|P28290-3|E9PHV5|P28290-2|E7EUL7 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11307.11307.3 9.47 9.47 1.141 5 1 1 0 884.0912 2570.2921 S593s Hydrogen 590 (R) KSGsQDFPQCNTIENTGTK (Q) KS(0.0)GS(0.99)QDFPQCNT(0.0)IENT(0.0)GT(0.0)K K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S SSFA2 139638.7 9 13 73.1 652.35 HUMAN 1 2.5211 -14.1693 ADKVENKSNEDVNSS-p Q99614;S83-p ADKVENKSNEDVNSS 0.134150744259901 0.0127448540945093 -0.336666666666667 0.45 17.9505632043672 26.408228066131 -0.336666666666667 0.45 0.0160303749114327 0.00228653152446751 -3.4522671560833 5.40226635761474 Q99614 TTC1 Q99614.S83.p_TTC1 Q99614_S83s _1_1_83_83 Q99614 Q99614 Tetratricopeptide repeat protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.26389.26389.4 18.56 18.56 3.723 4 1 1 0 898.9495 3512.8099 S83s TMT10 79 (K) VENKsNEDVNSSELDEEYLIELEK (N) VENKS(0.99)NEDVNS(0.0)S(0.0)ELDEEY(0.0)LIELEK K:TMT10,s:Phosphorylated S TTC1 33982 2 2 3145.1 59.36 HUMAN 1 -17.9506 26.4082 ADLEGEMSPEEILEW-p P51788;S767-p ADLEGEMSPEEILEW 0.895249079123384 0.522504761726917 0.0496666666666667 0.108 0.9405554636652 3.78837135906177 0.0496666666666667 0.108 0.805275439693854 0.417987085942047 0.258900195716131 0.876311362421854 P51788 CLCN2 P51788.S767.p_CLCN2 P51788_S767s_1_1_767_767 P51788 P51788|P51788-3|P51788-5|P51788-4 Chloride channel protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.36113.36113.5 15.75 15.75 3.419 4 1 1 0 1195.3755 5876.8451 M766m S767s TMT10 754 (R) ISLASDADLEGEmsPEEILEWEEQQLDEPVNFSDCKIDPAPFQLVER (T) IS(0.0)LAS(0.0)DADLEGEM(1.0)S(0.99)PEEILEWEEQQLDEPVNFS(0.0)DCKIDPAPFQLVER C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,s:Phosphorylated S CLCN2 99503.6 1 7 1767.1 116.44 HUMAN 1 0.9406 3.7884 ADLFHYDSMNAVNWG-p O94929;S607-p ADLFHYDSMNAVNWG 0.689362681991876 0.13701485269334 0.093 0.205333333333333 3.03117767256853 11.374053298615 0.093 0.205333333333333 0.497602132344918 0.072877702042327 0.726737751418417 2.22073417691983 O94929 ABLIM3 O94929.S607.p_ABLIM3 O94929_S607s _1_1_607_607 O94929 O94929|A0A0C4DGA7|O94929-3|O94929-2|A0A0A0MRD5|O94929-4 Actin-binding LIM protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26786.26786.3 16.18 16.18 5.549 4 1 1 0 874.3885 2541.1852 S607s TMT10 597 (R) TPSADLFHYDsMNAVNWGMR (E) T(0.0)PS(0.0)ADLFHY(0.0)DS(0.99)MNAVNWGMR s:Phosphorylated S ABLIM3 79511.8 1 7 2058.1 100.14 HUMAN 1 3.0312 11.3741 ADLLVPASVKVLRRS-p Q8WWQ0;S1734-p ADLLVPASVKVLRRS 0.344220109355696 0.971700567530295 -0.133666666666667 0.00366666666666669 8.60141412798863 0.176127775653751 -0.133666666666667 0.00366666666666669 0.137993486394672 0.960256426675033 -1.73936554757252 0.0521765294693596 Q8WWQ0 PHIP Q8WWQ0.S1734.p_PHIP Q8WWQ0_S1734s _1_1_1734_1734 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27771.27771.3 13.98 14.46 99 1 1 1 0 593.673 1699.0406 S1734s TMT10 1725 (K) LDADLLVPAsVK (V) LDADLLVPAS(1.0)VK K:TMT10,s:Phosphorylated S PHIP 208454.1 2 24 108.1 577.05 HUMAN 1 -8.6014 0.1761 ADLRDNYSPGWKFNH-p P07814;S1350-p ADLRDNYSPGWKFNH 0.633029215389621 0.426916040941879 -0.0653333333333333 0.075 3.7001202646497 4.92139170618625 -0.0653333333333333 0.075 0.426567706142623 0.322003675809672 -0.859354971138381 1.08941558202985 P07814 EPRS P07814.S1350.p_EPRS P07814_S1350s _1_1_1350_1350 P07814 P07814 Bifunctional glutamate/proline--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14977.14977.3 11.39 9.56 4.406 2 1 1 0 653.9973 1880.0067 S1350s TMT10 1343 (R) ADLRDNYsPGWK (F) ADLRDNY(0.0)S(0.99)PGWK K:TMT10,s:Phosphorylated S EPRS 172185.3 4 15 375.1 337.76 HUMAN 1 -3.7001 4.9214 ADLVRDRTPPHLLYS-p Q8NDT2;T532-p ADLVRDRTPPHLLYS 0.785660504702031 0.0894714582044046 0.065 0.188666666666667 2.01914604893505 13.872244192526 0.065 0.188666666666667 0.628181865756055 0.0409992187060926 0.513037907267598 2.66790940966875 Q8NDT2 RBM15B Q8NDT2.T532.p_RBM15B Q8NDT2_T532t _1_1_532_532 Q8NDT2 Q8NDT2|Q8NDT2-2 Putative RNA-binding protein 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15121.15121.5 20.54 14.2 6.651 3 1 1 0 590.101 2866.5121 T532t TMT10 522 (R) NLDADLVRDRtPPHLLYSDRDR (T) NLDADLVRDRT(0.99)PPHLLY(0.0)S(0.0)DRDR t:Phosphorylated T RBM15B 97489 9 10 199.1 454.11 HUMAN 1 2.0191 13.8722 ADNDGSGSESGYTTP-p Q7Z417;S214-p ADNDGSGSESGYTTP 0.285639526873677 0.00502548640285455 -0.156 -0.548666666666667 10.2701480026855 33.5117799169485 -0.156 -0.548666666666667 0.0939691286394513 0.000445473637607898 -2.02868596341437 -7.5620840181172 Q7Z417 NUFIP2 Q7Z417.S214.p_NUFIP2 Q7Z417_S212sS214s_2_2_212_214 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9940.9940.4 16.64 16.64 2.848 6 2 2 0 655.3055 2458.2665 S212s S214s TMT10 206 (K) GADNDGsGsESGYTTPKK (R) GADNDGS(0.99)GS(0.99)ES(0.0)GY(0.0)T(0.0)T(0.0)PKK K:TMT10,s:Phosphorylated S NUFIP2 76176.8 12 21 304.1 375.48 HUMAN 1 -10.2701 -33.5118 ADNDITPYLVSRFYR-p Q13523;Y849-p ADNDITPYLVSRFYR 0.367665434510445 0.0490622492889973 0.139666666666667 0.230666666666667 8.06400531437991 17.5109389445594 0.139666666666667 0.230666666666667 0.15617066822331 0.0177380594263149 1.64626204100955 3.36129807229936 Q13523 PRPF4B Q13523.Y849.p_PRPF4B Q13523_Y849y _1_1_849_849 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog GG20160819_MSz_CCLE_T4D7_pY_Injection_01.29002.29782.3 33.68 33.68 1.613 5 1 1 0 916.0988 2666.3082 Y849y TMT10 832 (K) LCDFGSASHVADNDITPyLVSR (F) LCDFGS(0.0)AS(0.0)HVADNDIT(0.0)PY(0.99)LVS(0.0)R C:Carbamidomethylation,y:Phosphorylated Y PRPF4B 117327.1 35 1 42.1 48.13 HUMAN 1 8.064 17.5109 ADNLSCPSPLNVMEP-p P28290;S1063-p ADNLSCPSPLNVMEP 0.845962218191127 0.231655914569119 -0.0276666666666667 0.117666666666667 1.40584856768505 8.3662784011988 -0.0276666666666667 0.117666666666667 0.723461031469043 0.145670684137475 -0.372796068482955 1.69808371556784 P28290 SSFA2 P28290.S1063.p_SSFA2 P28290_S1063s _1_1_1063_1063 P28290 P28290|P28290-3|P28290-2|E7EUL7 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36706.36706.5 25.95 26 5.1 6 1 1 0 744.5617 3638.8156 S1063s TMT10 1055 (R) SADNLSCPsPLNVMEPVTELMQEQSYLK (S) S(0.0)ADNLS(0.0)CPS(0.99)PLNVMEPVT(0.0)ELMQEQS(0.0)Y(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SSFA2 139638.7 10 27 73.1 652.35 HUMAN 1 -1.4058 8.3663 ADNVKDWSKVVLAYE-p P60174;S196-p ADNVKDWSKVVLAYE 0.431420516711443 0.299626041858567 0.106333333333333 0.152666666666667 6.72241458008491 6.90957248520577 0.106333333333333 0.152666666666667 0.212695617717495 0.203724261179628 1.41233039983278 1.44478088446904 P60174 TPI1 P60174.S196.p_TPI1 P60174_S196s _1_1_196_196 P60174 P60174|P60174-1|P60174-4 Triosephosphate isomerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18708.18708.3 10.81 10.81 99 1 1 1 0 681.3819 1962.1627 S196s TMT10 187 (K) VIADNVKDWsK (V) VIADNVKDWS(1.0)K K:TMT10,s:Phosphorylated S TPI1 31075.7 2 4 1065.1 181.63 HUMAN 1 6.7224 6.9096 ADPAAAASPCRAAAG-p Q9GZT9;S125-p ADPAAAASPCRAAAG 0.984358987146014 0.0256234842953931 -0.00433333333333333 -0.37 0.138236233090412 21.6483315711443 -0.00433333333333332 -0.37 0.968671175391815 0.00684174436053277 -0.04112478848803 -4.23758263479661 Q9GZT9 EGLN1 Q9GZT9.S125.p_EGLN1 Q9GZT9_S125s _1_1_125_125 Q9GZT9 Q9GZT9|Q9GZT9-2 Egl nine homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11578.11578.5 23.91 18.4 1.314 2 1 1 0 890.6608 4369.2926 S125s TMT10 114 (K) AKPPADPAAAAsPCRAAAGGQGSAVAAEAEPGKEEPPAR (S) AKPPADPAAAAS(0.99)PCRAAAGGQGS(0.0)AVAAEAEPGKEEPPAR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S EGLN1 46876 6 3 3111.1 60.37 HUMAN 1 -0.1382 -21.6483 ADPGAAPYLKTKFIC-p P40763-2;Y704-p ADPGAAPYLKTKFIC 0.375099103740569 0.844854696981056 0.607333333333333 -0.054 7.88334152995445 1.02950175965386 0.607333333333333 -0.0539999999999999 0.162804290883073 0.788950624060839 1.61491677307196 -0.281234537620917 P40763 STAT3 P40763.2.Y704.p_STAT3 P40763-2_Y704y _1_1_704_704 P40763-2 P40763-2 Isoform Del-701 of Signal transducer and activator of transcription 3 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.12636.12636.4 23.24 17.48 23.236 3 1 1 0 739.106 2873.4293 Y704y TMT10 686 (K) YCRPESQEHPEADPGAAPyLK (T) Y(0.0)CRPES(0.0)QEHPEADPGAAPY(0.99)LK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y STAT3 88777.9 1 1 140.1 23.24 HUMAN 1 7.8833 -1.0295 ADPKTLDSVTELASE-p Q15643;S890-p ADPKTLDSVTELASE 0.832315652988337 0.812294671962942 0.0886666666666667 -0.216666666666667 1.53819542013131 1.26590518239603 0.0886666666666667 -0.216666666666667 0.701746827598605 0.747152891910814 0.403916509683744 -0.339274637087544 Q15643 TRIP11 Q15643.S890.p_TRIP11 Q15643_S890s _1_1_890_890 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.36128.36128.4 11.86 6.6 1.14 6 1 1 0 647.3494 2506.4016 S890s TMT10 887 (K) TLDsVTELASEVSQLNTIK (E) T(0.0)LDS(0.99)VT(0.0)ELAS(0.0)EVS(0.0)QLNT(0.0)IK K:TMT10,s:Phosphorylated S TRIP11 228267 2 10 463.1 303.86 HUMAN 1 1.5382 -1.2659 ADPLPTPSQEKSQTE-p Q99575;S367-p ADPLPTPSQEKSQTE 0.881112907589968 0.20297037548925 0.0233333333333333 -0.146 1.08011280720385 9.11042868513705 0.0233333333333333 -0.146 0.779809854840672 0.122731807857453 0.29385489405613 -1.82681444246326 Q99575 POP1 Q99575.S367.p_POP1 Q99575_S367s _1_1_367_367 Q99575 Q99575 Ribonucleases P/MRP protein subunit POP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22168.22379.3 19.91 18.95 1.97 3 1 1 0 751.0531 2171.1782 S367s TMT10 355 (K) SAVCIADPLPTPsQEK (S) S(0.0)AVCIADPLPT(0.0)PS(0.99)QEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S POP1 116418.3 3 1 1660.1 122.97 HUMAN 1 1.0801 -9.1104 ADPPAENSSAPEAEQ-p P67809;S313-p ADPPAENSSAPEAEQ 0.452192101778898 0.0044956694532519 -0.147666666666667 0.564 6.35826498024398 34.4351059159425 -0.147666666666667 0.564 0.231298865167072 0.000360154966811349 -1.3481438741054 7.88855477988274 P67809 YBX1 P67809.S313.p_YBX1 P67809_S313sS314s_2_2_313_314 P67809 P67809 Nuclease-sensitive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8358.8496.3 12.86 12.86 99 2 2 2 0 762.9716 2126.9676 S313s S314s TMT10 305 (K) AADPPAENssAPEAEQGGAE (-) AADPPAENS(1.0)S(1.0)APEAEQGGAE s:Phosphorylated S YBX1 35923.5 1 19 929.2 199.34 HUMAN 1 -6.3583 34.4351 ADQHVPGSPFSVKVT-p P21333-2;S2120-p ADQHVPGSPFSVKVT 0.960719111754911 0.666376485564632 -0.0116666666666667 -0.0423333333333333 0.333986778655615 2.41255543035652 -0.0116666666666666 -0.0423333333333333 0.92597939354107 0.573778745945825 -0.0973146722527369 -0.598268923075787 P21333 FLNA P21333.2.S2120.p_FLNA P21333-2_S2120s _1_1_2120_2120 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19961.19961.3 16 16 5.957 2 1 1 0 685.3565 1974.0849 S2120s TMT10 2112 (K) FADQHVPGsPFSVK (V) FADQHVPGS(0.99)PFS(0.0)VK K:TMT10,s:Phosphorylated S FLNA 282751.6 2 15 198.1 454.47 HUMAN 1 -0.334 -2.4126 ADQRTRKSLGRGEFR-p O00159-3;S517-p ADQRTRKSLGRGEFR 0.0973600331101722 0.00274324290825798 -0.530333333333333 -0.683666666666667 21.4407441580083 38.806421249717 -0.530333333333333 -0.683666666666667 0.00717671308679623 0.000131630907371154 -4.19519999262426 -9.6072535597619 O00159 MYO1C O00159.3.S517.p_MYO1C O00159-3_S517s _1_1_517_517 O00159-3 O00159-3|F5H6E2|O00159-2 Isoform 3 of Unconventional myosin-Ic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7918.7918.3 9.47 9.47 99 1 1 1 0 410.878 1150.653 S517s TMT10 517 (K) sLGRGEFR (L) S(1.0)LGRGEFR s:Phosphorylated S MYO1C 120424.7 1 5 296.4 379.15 HUMAN 1 -21.4407 -38.8064 ADQTPGATPKKLSSW-p O75533;T211-p ADQTPGATPKKLSSW 0.294575702798297 0.0464087076757773 0.254 -0.319666666666667 10.0180909042091 17.8388651409731 0.254 -0.319666666666667 0.0995843079378219 0.0164480147169499 1.9848536436589 -3.42695388899841 O75533 SF3B1 O75533.T211.p_SF3B1 O75533_T211t _1_1_211_211 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9945.9945.3 17.43 14.65 3.056 3 1 1 0 737.3724 2130.1344 T211t TMT10 199 (R) RWDQTADQTPGAtPK (K) RWDQT(0.0)ADQT(0.0)PGAT(0.99)PK K:TMT10,t:Phosphorylated T SF3B1 146569.5 7 9 53.1 735.77 HUMAN 1 10.0181 -17.8389 ADRALRPSPLPEEPG-p Q6ZNH5;S98-p ADRALRPSPLPEEPG 0.250689107676978 0.155750902546266 -0.193 -0.167666666666667 11.4650601602976 10.6188147168758 -0.193 -0.167666666666667 0.0713664319075792 0.0867198520606971 -2.23779428629071 -2.08855114740776 Q6ZNH5 ZNF497 Q6ZNH5.S98.p_ZNF497 Q6ZNH5_S98s _1_1_98_98 Q6ZNH5 Q6ZNH5 Zinc finger protein 497 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12011.12011.3 8.25 8.25 99 1 1 1 0 629.9827 1807.9686 S98s TMT10 94 (R) ALRPsPLPEEPGCR (C) ALRPS(1.0)PLPEEPGCR C:Carbamidomethylation,s:Phosphorylated S ZNF497 56488.9 1 1 6998.1 8.25 HUMAN 1 -11.4651 -10.6188 ADRHAELSGSPLKSK-p Q9BTC8;S517-p ADRHAELSGSPLKSK 0.583266579079539 0.0241729942144232 0.092 -0.354 4.30799468825769 22.0333566533247 0.092 -0.354 0.3708519194547 0.00626129743187689 0.975563986293719 -4.32497881765688 Q9BTC8 MTA3 Q9BTC8.S517.p_MTA3 Q9BTC8_S517s _1_1_517_517 Q9BTC8 Q9BTC8|E7EV10|D6W5A2 Metastasis-associated protein MTA3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10203.10203.2 11.07 11.07 1.151 2 1 1 0 788.9304 1496.8837 S517s TMT10 513 (R) HAELsGSPLK (S) HAELS(0.99)GS(0.0)PLK K:TMT10,s:Phosphorylated S MTA3 68244.2 3 6 1441.1 142.09 HUMAN 1 4.308 -22.0334 ADRKIRLSSSASREP-p J3QR07;S118-p ADRKIRLSSSASREP 0.748381385750945 0.102568538519475 -0.0476666666666667 -0.225333333333333 2.3937784899734 13.0616301192777 -0.0476666666666667 -0.225333333333333 0.576264877801316 0.0494125182862975 -0.594343119638761 -2.52078738803989 J3QR07 YTHDC1 J3QR07.S118.p_YTHDC1 J3QR07_S118s _1_1_118_118 J3QR07 J3QR07|Q96MU7|Q96MU7-2 YTH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7719.7719.3 10.16 10.16 1.134 4 1 1 0 429.232 1205.7164 S118s TMT10 115 (K) IRLsSSASR (E) IRLS(0.99)S(0.0)S(0.0)AS(0.0)R s:Phosphorylated S YTHDC1 85871.1 6 5 702.1 239.92 HUMAN 1 -2.3938 -13.0616 ADRKRQLSPQSKSSS-p E7ERS3;S917-p ADRKRQLSPQSKSSS 0.0832139716415161 0.246163209405381 0.409333333333333 0.115333333333333 23.0919879042878 8.02217497238642 0.409333333333333 0.115333333333333 0.00490683223387847 0.157682139047302 4.57620700005687 1.63848631731142 E7ERS3 ZC3H18 E7ERS3.S917.p_ZC3H18 E7ERS3_S917s _1_1_917_917 E7ERS3 E7ERS3|Q86VM9 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8080.8287.2 10.69 4.26 2.483 2 1 1 0 663.3652 1245.7567 S917s TMT10 915 (R) QLsPQSK (S) QLS(0.99)PQS(0.0)K K:TMT10,s:Phosphorylated S ZC3H18 109165.8 11 20 157.1 499.97 HUMAN 1 23.092 8.0222 ADRLRAESPSPPRLL-p P50219;S77-p ADRLRAESPSPPRLL 0.144175666768838 0.27215750957738 0.255 0.192666666666667 17.1714432717622 7.44381701769623 0.255 0.192666666666667 0.0191803122385869 0.180143376329777 3.29647865846009 1.53804664695906 P50219 MNX1 P50219.S77.p_MNX1 P50219_S77s _1_1_77_77 P50219 P50219 Motor neuron and pancreas homeobox protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5912.5912.2 9.66 6.74 1.561 2 1 1 0 709.8722 1338.7691 S77s TMT10 73 (R) LRAEsPSPPR (L) LRAES(0.99)PS(0.0)PPR s:Phosphorylated S MNX1 40796.5 4 2 3467.1 50.26 HUMAN 1 17.1714 7.4438 ADRRREVSPAPAVAG-p O60292;S1364-p ADRRREVSPAPAVAG 0.807677513163485 0.67853698097264 0.0353333333333333 -0.0486666666666666 1.782485767581 2.30181110778293 0.0353333333333333 -0.0486666666666666 0.66336327305558 0.588598145215935 0.460074343918093 -0.574578795764756 O60292 SIPA1L3 O60292.S1364.p_SIPA1L3 O60292_S1364s _1_1_1364_1364 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11371.11371.2 17.9 17.9 9.956 2 1 1 0 889.9761 1698.9791 S1364s TMT10 1362 (R) EVsPAPAVAGQSK (G) EVS(0.99)PAPAVAGQS(0.0)K K:TMT10,s:Phosphorylated S SIPA1L3 195918.6 9 18 144.1 520.25 HUMAN 1 1.7825 -2.3018 ADRSQEPSPVGSRRG-p Q96CP6;S267-p ADRSQEPSPVGSRRG 0.530430921697941 0.110932382845482 -0.104 -0.233333333333333 5.09722946520634 12.6064162968881 -0.104 -0.233333333333333 0.309226748210226 0.0548729577802403 -1.12184642717544 -2.43909111955588 Q96CP6 GRAMD1A Q96CP6.S267.p_GRAMD1A Q96CP6_S267s _1_1_267_267 Q96CP6 M0QZ12|Q96CP6|Q96CP6-3|Q96CP6-2 GRAM domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2922.2922.2 14.74 14.74 5.328 3 1 1 0 562.2428 1043.5116 S267s Hydrogen 263 (R) SQEPsPVGSR (R) S(0.0)QEPS(0.99)PVGS(0.0)R s:Phosphorylated S GRAMD1A 81363.3 3 6 1250.1 161.94 HUMAN 1 -5.0972 -12.6064 ADSCVVSSDDEELSR-p P78317;S95-p ADSCVVSSDDEELSR 0.238898769658179 0.0974268457747565 -0.271333333333333 -0.368 11.8912845794412 13.370994590484 -0.271333333333333 -0.368 0.0646951228751428 0.0460151180947069 -2.31306624343356 -2.57667579269038 P78317 RNF4 P78317.S95.p_RNF4 P78317_S94sS95s_2_2_94_95 P78317 P78317 E3 ubiquitin-protein ligase RNF4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11824.11824.5 15.04 15.04 2.162 8 2 2 0 849.7811 4084.958 S94s S95s TMT10 82 (R) RLPQDHADSCVVssDDEELSRDRDVYVTTHTPR (N) RLPQDHADS(0.0)CVVS(0.99)S(0.99)DDEELS(0.0)RDRDVY(0.0)VT(0.0)T(0.0)HT(0.0)PR C:Carbamidomethylation,s:Phosphorylated S RNF4 21832 1 1 5953.1 15.04 HUMAN 1 -11.8913 -13.371 ADSLRVLSGHLMQTR-p Q6PJT7;S498-p ADSLRVLSGHLMQTR 0.610770564629011 0.534334872543646 -0.0806666666666667 0.0896666666666667 3.96655641246651 3.6617388213272 -0.0806666666666667 0.0896666666666667 0.401184697042556 0.430354271436064 -0.910731430370938 0.851756466729496 Q6PJT7 ZC3H14 Q6PJT7.S498.p_ZC3H14 Q6PJT7_S498s _1_1_498_498 Q6PJT7 Q6PJT7|Q6PJT7-2|Q6PJT7-9|Q6PJT7-5 Zinc finger CCCH domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13667.13667.3 10.32 4.45 5.601 2 1 1 0 484.2528 1370.7776 S498s TMT10 496 (R) VLsGHLMQTR (D) VLS(0.99)GHLMQT(0.0)R s:Phosphorylated S ZC3H14 83844.1 1 13 420.1 320.31 HUMAN 1 -3.9666 3.6617 ADSPGASSPEQPKRK-p P32519;S168-p ADSPGASSPEQPKRK 0.465533819815265 0.0271669948321718 0.117 0.317 6.1278202637765 21.2453323603549 0.117 0.317 0.243903466957874 0.00750700601705472 1.30730187791465 4.14726361528591 P32519 ELF1 P32519.S168.p_ELF1 P32519_S167sS168s_2_2_167_168 P32519 P32519|P32519-2 ETS-related transcription factor Elf-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11420.11420.3 9.03 9.03 4.013 4 2 2 0 684.643 1891.9802 S167s S168s TMT10 160 (K) YADSPGAssPEQPK (R) Y(0.0)ADS(0.0)PGAS(0.99)S(0.99)PEQPK K:TMT10,s:Phosphorylated S ELF1 67725 3 8 1950.1 105.53 HUMAN 2 6.1278 21.2453 ADSRDCRSPGLLDTT-p Q8IY92;S1469-p ADSRDCRSPGLLDTT 0.547923648687666 0.596255650817582 0.081 -0.0513333333333333 4.82382390340062 3.0401269525298 0.081 -0.0513333333333333 0.329319623071099 0.496577805325292 1.07167178637935 -0.728447787615905 Q8IY92 SLX4 Q8IY92.S1469.p_SLX4 Q8IY92_S1469s _1_1_1469_1469 Q8IY92 Q8IY92|Q8IY92-2 Structure-specific endonuclease subunit SLX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14624.14624.4 15.2 15.2 3.048 4 1 1 0 696.8303 2704.3344 S1469s TMT10 1458 (R) MNEAADSRDCRsPGLLDTTPIR (G) MNEAADS(0.0)RDCRS(0.99)PGLLDT(0.0)T(0.0)PIR C:Carbamidomethylation,s:Phosphorylated S SLX4 201834.1 9 22 218.1 430.83 HUMAN 1 4.8238 -3.0401 ADSTTEGTPADGFTV-p O75367;T178-p ADSTTEGTPADGFTV 0.557344438467801 0.611875014462769 0.097 0.0496666666666667 4.68680420726265 2.89905706278748 0.097 0.0496666666666667 0.33987528069847 0.512972748193952 1.04633753303863 0.699737671450848 O75367 H2AFY O75367.T178.p_H2AFY O75367_T178t _1_1_178_178 O75367 O75367|O75367-3|O75367-2 Core histone macro-H2A.1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21806.21806.2 22.8 22.8 3.6 8 1 1 0 1333.1532 2585.3347 T178t TMT10 168 (K) AASADSTTEGtPADGFTVLSTK (S) AAS(0.0)ADS(0.0)T(0.0)T(0.0)EGT(0.99)PADGFT(0.0)VLS(0.0)T(0.0)K K:TMT10,t:Phosphorylated T H2AFY 39787.5 2 4 1399.1 146.47 HUMAN 1 4.6868 2.8991 ADTFEDLSDVEGGGS-p O95671;S239-p ADTFEDLSDVEGGGS 0.43497101841619 0.0243831940032513 0.108333333333333 0.436 6.66031976556079 21.9734836325417 0.108333333333333 0.436 0.215758554299629 0.00634821514354905 1.40141290961675 4.31131632637906 O95671 ASMTL O95671.S239.p_ASMTL O95671_S239s _1_1_239_239 O95671 O95671|O95671-2|O95671-3 N-acetylserotonin O-methyltransferase-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17787.17787.4 19.13 19.13 3.395 6 1 1 0 896.4322 3502.7338 S239s TMT10 223 (R) SVKHDSIPAADTFEDLsDVEGGGSEPTQR (D) S(0.0)VKHDS(0.0)IPAADT(0.0)FEDLS(0.99)DVEGGGS(0.0)EPT(0.0)QR K:TMT10,s:Phosphorylated S ASMTL 69597.2 2 2 2260.1 90.98 HUMAN 1 6.6603 21.9735 ADTGGDDSDEDYEKV-p P78314-4;S501-p ADTGGDDSDEDYEKV 0.539819364546154 0.0150597191576338 -0.187666666666667 0.421 4.94482845318128 25.2068346754799 -0.187666666666667 0.421 0.320270659940873 0.0030152028327178 -1.09393785228042 5.08993161271987 P78314 SH3BP2 P78314.4.S501.p_SH3BP2 P78314-4_S501s_1_1_501_501 P78314-4 P78314-4|P78314-3 Isoform 4 of SH3 domain-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27362.27362.4 15.39 15.39 1.235 8 1 1 0 1102.4832 4343.9571 Q490q S501s Hydrogen 490 (R) qPSQADTGGDDsDEDYEKVPLPNSVFVNTTESCEVER (L) Q(1.0)PS(0.0)QADT(0.0)GGDDS(0.99)DEDY(0.0)EKVPLPNS(0.0)VFVNT(0.0)T(0.0)ES(0.0)CEVER K:TMT10-Lys-Only,C:Carbamidomethylation,q:Pyroglutamic acid,s:Phosphorylated S SH3BP2 68698.6 8 6 1751.1 117.58 HUMAN 1 -4.9448 25.2068 ADTPLAQSDEEEERG-p Q9BQY9-4;S246-p ADTPLAQSDEEEERG 0.0552688318450056 0.00335441543722098 0.523666666666667 0.799666666666667 27.385443235282 37.0191394928205 0.523666666666667 0.799666666666667 0.00182581039973856 0.000198648847940632 5.67443094860065 8.8681185389793 Q9BQY9 DBNDD2 Q9BQY9.4.S246.p_DBNDD2 Q9BQY9-4_S246s _1_1_246_246 Q9BQY9-4 Q9BQY9-4|Q9BQY9-2 Isoform 4 of Dysbindin domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11706.11706.4 28.44 24.93 2.135 15 1 1 0 1251.7622 4924.0528 S246s TMT10 217 (R) TSSSSSSDSSTNLHSPNPSDDGADTPLAQsDEEEERGDGGAEPGACS (-) T(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)DS(0.0)S(0.0)T(0.0)NLHS(0.0)PNPS(0.0)DDGADT(0.0)PLAQS(0.99)DEEEERGDGGAEPGACS(0.0) C:Carbamidomethylation,s:Phosphorylated S DBNDD2 29241 1 1 4642.1 28.44 HUMAN 1 27.3854 37.0191 ADTPPAPSPPPTPAP-p Q12929;S625-p ADTPPAPSPPPTPAP 0.772184255224755 0.282746857572098 -0.0413333333333333 0.12 2.14728398030699 7.23403116823813 -0.0413333333333334 0.12 0.609918212698158 0.189058793982725 -0.541177603507349 1.50149132257254 Q12929 EPS8 Q12929.S625.p_EPS8 Q12929_S625s _1_1_625_625 Q12929 Q12929 Epidermal growth factor receptor kinase substrate 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27223.27223.4 25.25 19.86 2.69 8 1 1 0 1242.4126 4886.648 S625s Hydrogen 611 (R) MEYGPRPADTPPAPsPPPTPAPVPVPLPPSTPAPVPVSKVPANITR (Q) MEY(0.0)GPRPADT(0.0)PPAPS(0.99)PPPT(0.0)PAPVPVPLPPS(0.0)T(0.0)PAPVPVS(0.0)KVPANIT(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S EPS8 92222.2 10 4 994.1 191.04 HUMAN 1 -2.1473 7.234 ADTPRRNSSSSSSPS-p B7WPE2;S157-p ADTPRRNSSSSSSPS 0.991004899675327 0.00678565854724319 -0.00233333333333334 0.599333333333333 0.0811345626359556 31.1282199501417 -0.00233333333333332 0.599333333333333 0.981491502033518 0.000771219505286161 -0.0242904936608819 6.77159949718498 B7WPE2 EML3 B7WPE2.S157.p_EML3 B7WPE2_S157s _1_1_157_157 B7WPE2 Q32P44-2|B7WPE2|G3V1D0 Echinoderm microtubule associated protein like 3, isoform CRA_e HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3024.3024.4 12.98 12.98 1.214 7 1 1 0 461.4715 1762.8994 S157s TMT10 155 (R) RNsSSSSSPSERPR (Q) RNS(0.99)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)PS(0.0)ERPR s:Phosphorylated S EML3 96366.1 5 2 1068.1 181 HUMAN 1 -0.0811 31.1282 ADTRRLNSKPQDLTD-p A0A087X0R6;S14-p ADTRRLNSKPQDLTD 0.56567049756549 0.0160880317672072 0.110333333333333 0.434333333333333 4.56003045109293 24.7735241059146 0.110333333333333 0.434333333333333 0.349942713353285 0.00333155961852856 1.02277660809175 4.98050212244564 A0A087X0R6 NotFound A0A087X0R6.S14.p_NotFound A0A087X0R6_S14s _1_1_14_14 A0A087X0R6 Q9UMY4|A0A087X0R6 Sorting nexin-12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32423.32423.4 29.59 29.59 1.223 5 1 1 0 1075.058 4217.2395 S14s TMT10 11 (R) RLNsKPQDLTDAYGPPSNFLEIDIFNPQTVGVGR (A) RLNS(0.99)KPQDLT(0.0)DAY(0.0)GPPS(0.0)NFLEIDIFNPQT(0.0)VGVGR K:TMT10,s:Phosphorylated S SNX12 20053.4 1 2 2063.1 99.88 HUMAN 1 4.56 24.7735 ADTSGGDSPKDESKP-p P85037;S299-p ADTSGGDSPKDESKP 0.795239329601894 0.0182541412747412 -0.0416666666666667 0.580666666666667 1.92274635620378 23.9321782388944 -0.0416666666666667 0.580666666666667 0.642281428149902 0.0040437302428502 -0.491624875432651 4.77268759109694 P85037 FOXK1 P85037.S299.p_FOXK1 P85037_S299s _1_1_299_299 P85037 P85037|P85037-2 Forkhead box protein K1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35643.36061.4 17.19 17.19 1.166 9 1 1 0 1212.6045 4767.4316 S299s TMT10 286 (K) AASEQQADTSGGDsPKDESKPPFSYAQLIVQAISSAQDR (Q) AAS(0.0)EQQADT(0.0)S(0.0)GGDS(0.99)PKDES(0.0)KPPFS(0.0)Y(0.0)AQLIVQAIS(0.0)S(0.0)AQDR K:TMT10,s:Phosphorylated S FOXK1 75912.4 10 7 686.1 243.66 HUMAN 1 -1.9227 23.9322 ADTTENQSGVSFDKT-p P05023-4;S407-p ADTTENQSGVSFDKT 0.259441883712572 0.197679311494721 -0.175333333333333 0.172666666666667 11.1180949563222 9.26402232858114 -0.175333333333333 0.172666666666667 0.0773019597728435 0.118467102676241 -2.17681159230628 1.85338827912416 P05023 ATP1A1 P05023.4.S407.p_ATP1A1 P05023-4_S407s _1_1_407_407 P05023-4 P05023|P05023-4|P05023-3 Isoform 4 of Sodium/potassium-transporting ATPase subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24953.24953.4 27.02 22.2 2.162 5 1 1 0 944.9314 3696.7463 S407s TMT10 386 (R) MTVAHMWFDNQIHEADTTENQsGVSFDK (T) MT(0.0)VAHMWFDNQIHEADT(0.0)T(0.0)ENQS(0.99)GVS(0.0)FDK K:TMT10,s:Phosphorylated S ATP1A1 114310.4 1 5 1313.1 155.17 HUMAN 1 -11.1181 9.264 ADTTSPETPDSSASK-p Q14203;T108-p ADTTSPETPDSSASK 0.655498068652745 0.060067107624332 -0.0613333333333333 -0.239333333333333 3.44031930989953 16.273110450749 -0.0613333333333333 -0.239333333333333 0.452864282366907 0.0235878824563318 -0.808511079295403 -3.11855720073844 Q14203 DCTN1 Q14203.T108.p_DCTN1 Q14203_T108t _1_1_108_108 Q14203 Q14203|Q14203-6|E7EX90|Q14203-4|Q14203-3|Q6AWB1 Dynactin subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18812.18812.4 22.86 22.86 1.104 8 1 1 0 791.6241 3083.5057 T108t TMT10 91 (R) QSQIQVFEDGADTTSPEtPDSSASK (V) QS(0.0)QIQVFEDGADT(0.0)T(0.0)S(0.0)PET(0.99)PDS(0.0)S(0.0)AS(0.0)K K:TMT10,t:Phosphorylated T DCTN1 142434.1 3 2 2852.1 68.06 HUMAN 1 -3.4403 -16.2731 ADTTSTVTPVPGQEK-p Q9H9B1;T652-p ADTTSTVTPVPGQEK 0.651925716925162 0.0240742085490205 0.0626666666666667 0.360333333333333 3.48345222389175 22.05937932211 0.0626666666666667 0.360333333333333 0.448388822197736 0.00622389228419864 0.817006866647167 4.33092529871774 Q9H9B1 EHMT1 Q9H9B1.T652.p_EHMT1 Q9H9B1_T652t _1_1_652_652 Q9H9B1 Q9H9B1|A0A1B0GV09|Q9H9B1-3|Q9H9B1-4 Histone-lysine N-methyltransferase EHMT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11073.11073.3 12.39 13.02 2.356 5 1 1 0 690.3579 1989.0905 T652t TMT10 645 (K) ADTTSTVtPVPGQEK (G) ADT(0.0)T(0.0)S(0.0)T(0.0)VT(0.99)PVPGQEK K:TMT10,t:Phosphorylated T EHMT1 144088.3 1 6 1454.1 140.61 HUMAN 1 3.4835 22.0594 ADTVSRPSPDYPMLP-p Q03111;S155-p ADTVSRPSPDYPMLP 0.814213665221095 0.0506676416271253 -0.033 0.330333333333333 1.71525932987541 17.3053642216652 -0.033 0.330333333333333 0.673711664985081 0.0185978858525634 -0.444778234417961 3.32043582852074 Q03111 MLLT1 Q03111.S155.p_MLLT1 Q03111_S155s_1_1_155_155 Q03111 Q03111 Protein ENL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31128.31128.5 23.46 19.84 1.167 7 1 1 0 929.2798 4546.4003 S155s M160m TMT10 138 (R) AGGVMVMPEGADTVSRPsPDYPmLPTIPLSAFSDPKK (T) AGGVM(0.0)VM(0.0)PEGADT(0.0)VS(0.0)RPS(0.99)PDY(0.0)PM(0.99)LPT(0.0)IPLS(0.0)AFS(0.0)DPKK K:TMT10,s:Phosphorylated S,m:Oxidized methionine MLLT1 62454.4 3 1 685.1 243.68 HUMAN 1 -1.7153 17.3054 ADVIECLSLEKLVNE-p Q3SXY8;S148-p ADVIECLSLEKLVNE 0.413371094267188 0.126512232474824 -0.168 0.181 7.07506865137291 11.8369534603183 -0.168 0.181 0.19610701754911 0.065509555700832 -1.47414729174829 2.30231722172203 Q3SXY8 ARL13B Q3SXY8.S148.p_ARL13B Q3SXY8_S148s _1_1_148_148 Q3SXY8 Q3SXY8|Q3SXY8-3|Q3SXY8-2 ADP-ribosylation factor-like protein 13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27688.27688.3 19.86 13.82 99 1 1 1 0 791.0663 2291.2205 S148s TMT10 135 (K) EGALGEADVIECLsLEK (L) EGALGEADVIECLS(1.0)LEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARL13B 49098.8 1 1 4948.1 24.78 HUMAN 1 -7.0751 11.837 ADVNIRHSGRDDTSR-p P08621;S211-p ADVNIRHSGRDDTSR 0.0970963427309302 0.0221946483915287 -0.360666666666667 -0.446333333333333 21.4782768744765 22.5870479062688 -0.360666666666667 -0.446333333333333 0.00711495753783156 0.00551182232298749 -4.20363331054868 -4.45260750057748 P08621 SNRNP70 P08621.S211.p_SNRNP70 P08621_S211s _1_1_211_211 P08621 P08621|P08621-2 U1 small nuclear ribonucleoprotein 70 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3670.3670.4 11.88 7.3 2.63 3 1 1 0 531.2553 2042.0325 S211s TMT10 202 (R) GGADVNIRHsGRDDTSR (Y) GGADVNIRHS(0.99)GRDDT(0.0)S(0.0)R s:Phosphorylated S SNRNP70 51612.9 1 2 607.1 262.24 HUMAN 1 -21.4783 -22.587 ADVSGGVSAPDISLG-p Q09666;S5577-p ADVSGGVSAPDISLG 0.574411066871713 0.0516161030255587 0.101 0.266 4.43165775155281 17.1758563047959 0.101 0.266 0.360441032307982 0.0191608322854877 0.998793209230082 3.29480870068327 Q09666 AHNAK Q09666.S5577.p_AHNAK Q09666_S5577s _1_1_5577_5577 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21042.21042.4 15.32 15.32 4.177 4 1 1 0 687.6063 2667.4354 S5577s TMT10 5568 (K) GGADVSGGVsAPDISLGEGHLSVK (G) GGADVS(0.0)GGVS(0.99)APDIS(0.0)LGEGHLS(0.0)VK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 147 1.1 4313.36 HUMAN 1 4.4317 17.1759 ADVTRRLSEDYGVLK-p P32119;S112-p ADVTRRLSEDYGVLK 0.0820161473504551 0.0189342040006697 -0.576333333333333 0.324333333333333 23.213833791548 23.6988922338002 -0.576333333333333 0.324333333333333 0.00477107914430494 0.00426688341424171 -4.605160300212 4.71612477909994 P32119 PRDX2 P32119.S112.p_PRDX2 P32119_S112s _1_1_112_112 P32119 P32119|A6NIW5 Peroxiredoxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16560.16560.3 12.09 6.28 4.466 2 1 1 0 573.3151 1637.9627 S112s TMT10 110 (R) RLsEDYGVLK (T) RLS(0.99)EDY(0.0)GVLK K:TMT10,s:Phosphorylated S PRDX2 22062.7 1 1 5443.1 19.27 HUMAN 1 -23.2138 23.6989 ADWLEGGSPVSGQLL-p Q8IY92;S884-p ADWLEGGSPVSGQLL 0.798199688105137 0.30332530659105 0.0676666666666667 -0.207666666666667 1.88594148289417 6.8403617009841 0.0676666666666667 -0.207666666666667 0.647747658428659 0.206996894480837 0.483392140100887 -1.43265261242341 Q8IY92 SLX4 Q8IY92.S884.p_SLX4 Q8IY92_S884s _1_1_884_884 Q8IY92 Q8IY92|Q8IY92-2 Structure-specific endonuclease subunit SLX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29867.29867.3 25.09 25.09 1.788 2 1 1 0 1116.9025 3268.7214 S884s TMT10 870 (R) AAGAGEDADWLEGGsPVSGQLLAGVQVQK (Q) AAGAGEDADWLEGGS(0.99)PVS(0.0)GQLLAGVQVQK K:TMT10,s:Phosphorylated S SLX4 201834.1 2 7 218.1 430.83 HUMAN 1 1.8859 -6.8404 ADYMGADSFDNIKRK-p P46976;S337-p ADYMGADSFDNIKRK 0.297102385596782 0.235665416510418 0.154 -0.120333333333333 9.93117639393753 8.26614641162346 0.154 -0.120333333333333 0.101597345407555 0.149068320632866 1.96975587984483 -1.68074962058848 P46976 GYG1 P46976.S337.p_GYG1 P46976_S337s _1_1_337_337 P46976 P46976|P46976-2 Glycogenin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19396.19396.3 13.55 9.26 5.966 2 1 1 0 966.7774 2818.3507 S337s TMT10 323 (K) ERWEQGQADYMGADsFDNIK (R) ERWEQGQADY(0.0)MGADS(0.99)FDNIK K:TMT10,s:Phosphorylated S GYG1 39725.4 1 1 6159.1 13.55 HUMAN 1 9.9312 -8.2661 AEAEKTFSYPLDLLL-p Q9Y296;S33-p AEAEKTFSYPLDLLL 0.0507410919483046 0.7473747732744 -0.986666666666667 0.0356666666666667 28.4696605095439 1.74591330981689 -0.986666666666667 0.0356666666666667 0.00142243997571542 0.668973121972729 -5.97969324915013 0.451717260819687 Q9Y296 TRAPPC4 Q9Y296.S33.p_TRAPPC4 Q9Y296_S33s _1_1_33_33 Q9Y296 E9PN70|Q9Y296|J3KP27|E9PQE8|Q9Y296-2|G5EA23|E9PKS9|G3V1A0 Trafficking protein particle complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37106.37106.3 14.93 12 2.118 3 1 1 0 616.6819 1768.0661 S33s TMT10 31 (K) TFsYPLDLLLK (L) T(0.0)FS(0.99)Y(0.0)PLDLLLK K:TMT10,s:Phosphorylated S TRAPPC4 24453.7 1 1 4564.1 29.76 HUMAN 1 -28.4697 1.7459 AEAHAFKSPSKENKK-p Q9NPI1-2;S289-p AEAHAFKSPSKENKK 0.538254677344084 0.000952253650599092 -0.104 -1.3 4.97251943115633 54.1950393461203 -0.104 -1.3 0.318235083928857 3.8062390921708e-06 -1.0990197187011 -18.8056191564312 Q9NPI1 BRD7 Q9NPI1.2.S289.p_BRD7 Q9NPI1-2_S289s _1_1_289_289 Q9NPI1-2 Q9NPI1-2 Isoform 2 of Bromodomain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7534.7534.4 18.58 17.32 1.536 3 1 1 0 682.8427 2648.3883 S289s TMT10 275 (R) EREDSGDAEAHAFKsPSK (E) EREDS(0.0)GDAEAHAFKS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S BRD7 74721.8 10 4 1237.1 163.17 HUMAN 1 -4.9725 -54.195 AEANKNASILLEELD-p O75179;S1457-p AEANKNASILLEELD 0.25414491835742 0.043516445820085 -0.331 -0.563333333333333 11.3272189331614 18.2394705385511 -0.331 -0.563333333333333 0.0736678689219834 0.0149986767773084 -2.21353775369053 -3.50797246577648 O75179 ANKRD17 O75179.S1457.p_ANKRD17 O75179_S1457s _1_1_1457_1457 O75179 O75179|O75179-2|O75179-7|O75179-6 Ankyrin repeat domain-containing protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34206.34206.3 17.9 17.57 99 1 1 1 0 675.7029 1945.1258 S1457s TMT10 1455 (K) NAsILLEELDLEK (L) NAS(1.0)ILLEELDLEK K:TMT10,s:Phosphorylated S ANKRD17 276135.9 1 5 287.2 383.69 HUMAN 1 -11.3272 -18.2395 AEANKNASILLKELD-p Q8IWZ3-6;S1429-p AEANKNASILLKELD 0.492929374501918 0.010199327857445 -0.104333333333333 -0.469 5.65887679736239 27.9697630008111 -0.104333333333333 -0.469 0.271714190413903 0.00159596623846157 -1.2235481201834 -5.82899959303723 Q8IWZ3 ANKHD1 Q8IWZ3.6.S1429.p_ANKHD1 Q8IWZ3-6_S1429s _1_1_1429_1429 Q8IWZ3-6 Q8IWZ3-6|Q8IWZ3-4 Isoform 6 of Ankyrin repeat and KH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20153.20153.2 10.27 3.8 99 1 1 1 0 648.8886 1216.8029 S1429s TMT10 1427 (K) NAsILLK (E) NAS(1.0)ILLK K:TMT10,s:Phosphorylated S ANKHD1 279224.1 1 30 287.1 383.69 HUMAN 1 -5.6589 -27.9698 AEAPEGLSPAPPARS-p Q9H9J4;S856-p AEAPEGLSPAPPARS 0.427328335550124 0.725410031894108 0.189666666666667 -0.034 6.80199201220371 1.91948702812123 0.189666666666667 -0.034 0.208833803692864 0.64276363359287 1.42630647721703 -0.490840952620393 Q9H9J4 USP42 Q9H9J4.S856.p_USP42 Q9H9J4_S856s _1_1_856_856 Q9H9J4 Q9H9J4|Q9H9J4-2 Ubiquitin carboxyl-terminal hydrolase 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16959.16959.5 21.07 20.92 4.564 4 1 1 0 840.2062 4117.0246 S856s TMT10 845 (R) DSALAEAPEGLsPAPPARSEEPCEQPLLVHPSGDHAR (D) DS(0.0)ALAEAPEGLS(0.99)PAPPARS(0.0)EEPCEQPLLVHPS(0.0)GDHAR C:Carbamidomethylation,s:Phosphorylated S USP42 146872.9 4 5 255.1 399.37 HUMAN 1 6.802 -1.9195 AEAPGPPSPMASATE-p Q02833-2;S232-p AEAPGPPSPMASATE 0.26421550293066 0.105544071805219 -0.165 -0.178666666666667 10.9640664184897 12.9017127938104 -0.165 -0.178666666666667 0.0800927781512719 0.0512659158855124 -2.14981525582088 -2.49201616045766 Q02833 RASSF7 Q02833.2.S232.p_RASSF7 Q02833-2_S232s _1_1_232_232 Q02833-2 Q02833|A0A0G2JMW4|Q02833-2|A0A0G2JLR5|Q02833-3 Isoform 2 of Ras association domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27644.27644.4 23.8 23.8 4.565 3 1 1 0 704.8492 2736.4076 S232s TMT10 216 (R) ALEAELQLAAEAPGPPsPMASATER (L) ALEAELQLAAEAPGPPS(0.99)PMAS(0.0)AT(0.0)ER s:Phosphorylated S RASSF7 36913.2 2 2 3932.1 40.53 HUMAN 1 -10.9641 -12.9017 AEAPTAPSPAQTLEN-p Q9UHD8;S203-p AEAPTAPSPAQTLEN 0.986910430314257 0.384302646849019 0.00266666666666666 0.105 0.117088599027221 5.51908949226447 0.00266666666666666 0.105 0.97339954767555 0.280602186481586 0.0349146840972482 1.19812698487081 Q9UHD8 SEPT9 Q9UHD8.S203.p_SEPT9 Q9UHD8_S203s_1_1_203_203 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2|Q9UHD8-7|Q9UHD8-3 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22680.22680.4 23.64 23.64 2.224 6 1 1 0 1099.3201 4313.2964 S203s N210n TMT10 187 (K) RVEIQMPKPAEAPTAPsPAQTLEnSEPAPVSQLQSR (L) RVEIQMPKPAEAPT(0.0)APS(0.99)PAQT(0.0)LEN(1.0)S(0.0)EPAPVS(0.0)QLQS(0.0)R K:TMT10,s:Phosphorylated S,n:Deamidated SEPT9 65685.6 10 15 110.1 572.91 HUMAN 1 0.1171 5.5191 AEARHLVYESDQNKD-p O43852-4;Y283-p AEARHLVYESDQNKD 0.744690566487893 0.216382043108762 0.100666666666667 0.299333333333333 2.42780710240697 8.74490484485446 0.100666666666667 0.299333333333333 0.571767268147066 0.133508684137105 0.60158877466632 1.76359077939462 O43852 CALU O43852.4.Y283.p_CALU O43852-4_Y283y _1_1_283_283 O43852-4 O43852-3|O43852-4|O43852-2|O43852-5|O43852-15 Isoform 4 of Calumenin GG20160819_MSz_CCLE_T4D7_pY_Injection_01.9566.9566.3 13.44 13.44 10.142 2 1 1 0 590.9659 1690.9165 Y283y TMT10 280 (R) HLVyESDQNK (D) HLVY(0.99)ES(0.0)DQNK K:TMT10,y:Phosphorylated Y CALU 38192.3 2 1 258.1 13.44 HUMAN 1 2.4278 8.7449 AEATVSGSPEAPGTN-p Q9BZV1;S96-p AEATVSGSPEAPGTN 0.580388084050067 0.193193228865224 0.117666666666667 0.157666666666667 4.34542652689519 9.3883110735798 0.117666666666667 0.157666666666667 0.367669282272729 0.115124801037128 0.982608700171032 1.87489861493706 Q9BZV1 UBXN6 Q9BZV1.S96.p_UBXN6 Q9BZV1_S96s _1_1_96_96 Q9BZV1 Q9BZV1|Q9BZV1-2 UBX domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16933.16933.3 18.57 18.57 1.113 5 1 1 0 912.1083 2654.3471 S96s TMT10 86 (K) ELQAEATVSGsPEAPGTNVVSEPR (E) ELQAEAT(0.0)VS(0.0)GS(0.99)PEAPGT(0.0)NVVS(0.0)EPR s:Phosphorylated S UBXN6 50038.1 1 1 4004.1 39.3 HUMAN 1 4.3454 9.3883 AEAVRPKTPPVVIKS-p Q96A49;T248-p AEAVRPKTPPVVIKS 0.946153351305424 0.200666290391626 -0.0113333333333333 -0.173 0.473318615365974 9.17702713127083 -0.0113333333333333 -0.173 0.896743295717529 0.120864090092721 -0.135992487009137 -1.83833597557594 Q96A49 SYAP1 Q96A49.T248.p_SYAP1 Q96A49_T248t _1_1_248_248 Q96A49 Q96A49 Synapse-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23425.23629.4 16.95 12.06 99 1 1 1 0 742.6859 2887.7588 T248t TMT10 235 (R) EQDLPLAEAVRPKtPPVVIK (S) EQDLPLAEAVRPKT(1.0)PPVVIK K:TMT10,t:Phosphorylated T SYAP1 39989.7 31 3 877.1 208.41 HUMAN 1 -0.4733 -9.177 AEAYTGLSPPVPSFN-p O43164;S216-p AEAYTGLSPPVPSFN 0.334696113171396 0.339374953263171 -0.138666666666667 -0.098 8.87329532489401 6.21693646683749 -0.138666666666667 -0.098 0.129619537503586 0.238949625014832 -1.78642986163883 -1.32279302347704 O43164 PJA2 O43164.S216.p_PJA2 O43164_S216s _1_1_216_216 O43164 O43164|O43164-2 E3 ubiquitin-protein ligase Praja-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23943.23943.3 12.57 12.57 2.506 4 1 1 0 844.73 2452.2016 S216s TMT10 208 (R) EAEAYTGLsPPVPSFNCEVR (D) EAEAY(0.0)T(0.0)GLS(0.99)PPVPS(0.0)FNCEVR C:Carbamidomethylation,s:Phosphorylated S PJA2 79239.7 5 2 2853.1 68.06 HUMAN 1 -8.8733 -6.2169 AECGPGGS_______-p Q9NPI1-2;S652-p AECGPGGS_______ 0.309869250687191 0.140410089095362 -0.163333333333333 0.153333333333333 9.51619723465281 11.2348896173603 -0.163333333333333 0.153333333333333 0.111784162282956 0.0752507856078103 -1.89776549272185 2.19629753317815 Q9NPI1 BRD7 Q9NPI1.2.S652.p_BRD7 Q9NPI1-2_S622sS652s_2_2_622_652 Q9NPI1-2 Q9NPI1-2 Isoform 2 of Bromodomain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34287.34287.5 7 7 0 6 2 2 0 974.8585 4709.3239 S622s N628n S652s TMT10 615 (K) AMGISIPsPVMENnFVDLTEDTEEPKKTDVAECGPGGs (-) AMGIS(0.0)IPS(0.99)PVMEN(0.50)N(0.50)FVDLT(0.0)EDT(0.0)EEPKKT(0.0)DVAECGPGGS(0.99) K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated BRD7 74721.8 1 8 1237.1 163.17 HUMAN 1 -9.5162 11.2349 AEDAEGQSPLSQKYS-p Q96F24;S113-p AEDAEGQSPLSQKYS 0.177445913026346 0.136389413943039 -0.31 -0.164 14.884686892674 11.4000226492965 -0.31 -0.164 0.0324736653416225 0.0724432182011321 -2.85685195266548 -2.22529869715875 Q96F24 NRBF2 Q96F24.S113.p_NRBF2 Q96F24_S113s _1_1_113_113 Q96F24 Q96F24|Q96F24-3 Nuclear receptor-binding factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9631.9631.5 18.38 18.38 4.304 5 1 1 0 694.9562 3390.7857 S113s TMT10 93 (K) DAAAHLQTSHKPSAEDAEGQsPLSQK (Y) DAAAHLQT(0.0)S(0.0)HKPS(0.0)AEDAEGQS(0.99)PLS(0.0)QK K:TMT10,s:Phosphorylated S NRBF2 32548.3 1 1 3321.1 53.99 HUMAN 1 -14.8847 -11.4 AEDEALLSEEDDPID-p Q04721;S1778-p AEDEALLSEEDDPID 0.917780326740951 0.269506158371507 -0.0193333333333333 0.141666666666667 0.727558756903588 7.49891204787742 -0.0193333333333334 0.141666666666667 0.845754124334434 0.177872494303289 -0.204070231719813 1.5476344329529 Q04721 NOTCH2 Q04721.S1778.p_NOTCH2 Q04721_S1778s _1_1_1778_1778 Q04721 Q04721 Neurogenic locus notch homolog protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17731.17731.5 20.49 20.49 7.663 2 1 1 0 797.5888 3903.9423 S1778s TMT10 1771 (K) AEDEALLsEEDDPIDRRPWTQQHLEAADIRR (T) AEDEALLS(0.99)EEDDPIDRRPWT(0.0)QQHLEAADIRR s:Phosphorylated S NOTCH2 279264.6 1 2 1083.1 179.88 HUMAN 1 -0.7276 7.4989 AEDERESTDDESNPL-p Q14669-3;T1425-p AEDERESTDDESNPL 0.938121433931205 0.920405522725287 0.0116666666666667 0.011 0.540190568672792 0.507072717062888 0.0116666666666667 0.011 0.883041151671013 0.889800669728595 0.15419853996847 0.145196525680093 Q14669 TRIP12 Q14669.3.T1425.p_TRIP12 Q14669-3_S1424sT1425t_2_2_1424_1425 Q14669-3 Q14669-3|Q14669-2|Q14669-4 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18480.18480.3 11.32 11.32 11.321 4 2 2 0 971.4098 2752.2859 S1424s T1425t TMT10 1413 (R) QFSIQAEDEREstDDESNPLGR (A) QFS(0.0)IQAEDERES(0.99)T(0.99)DDES(0.0)NPLGR s:Phosphorylated S,t:Phosphorylated T TRIP12 227456.1 2 24 234.1 420.47 HUMAN 1 0.5402 0.5071 AEDGVRGSPPVPSGP-p Q9H4L4;S212-p AEDGVRGSPPVPSGP 0.379710239580533 0.0443556193834929 0.119 0.251333333333333 7.76851938782816 18.1147688607311 0.119 0.251333333333333 0.16716604255834 0.015435585720786 1.59497744681775 3.48265551512927 Q9H4L4 SENP3 Q9H4L4.S212.p_SENP3 Q9H4L4_S212s _1_1_212_212 Q9H4L4 Q9H4L4|A0A087X0R7 Sentrin-specific protease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35501.35501.4 26.25 26.25 5.14 2 1 1 0 857.4309 3346.7337 S212s TMT10 197 (R) LGLLGALMAEDGVRGsPPVPSGPPMEEDGLR (W) LGLLGALMAEDGVRGS(0.99)PPVPS(0.0)GPPMEEDGLR s:Phosphorylated S SENP3 65636.2 12 6 396.1 329.46 HUMAN 1 7.7685 18.1148 AEDKSIGSPMEEREK-p Q96LB3;S300-p AEDKSIGSPMEEREK 0.960420214725763 0.177754007165249 -0.00900000000000001 -0.271333333333333 0.336690722647065 9.86746997422911 -0.009 -0.271333333333333 0.925403052545748 0.103098655701947 -0.098075256726037 -1.95791443702438 Q96LB3 IFT74 Q96LB3.S300.p_IFT74 Q96LB3_S300s _1_1_300_300 Q96LB3 Q96LB3|Q96LB3-2 Intraflagellar transport protein 74 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9638.9638.3 12.66 12.66 2.675 2 1 1 0 600.9713 1720.9304 S300s TMT10 297 (K) SIGsPMEEREK (L) S(0.0)IGS(0.99)PMEEREK K:TMT10,s:Phosphorylated S IFT74 69352.2 1 1 6272.1 12.66 HUMAN 1 -0.3367 -9.8675 AEDQLDGSLEDNLDL-p O95049-3;S797-p AEDQLDGSLEDNLDL 0.190209416769307 0.605584109357819 0.215666666666667 0.0533333333333333 14.101845704739 2.95624527039081 0.215666666666667 0.0533333333333334 0.0388879840129739 0.506262166081812 2.71163675531519 0.711412106436472 O95049 TJP3 O95049.3.S797.p_TJP3 O95049-3_S797s _1_1_797_797 O95049-3 O95049-3|O95049-4 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22926.22926.4 15.85 15.85 7.74 7 1 1 0 1226.0569 4821.2496 S797s TMT10 781 (R) EQQTRPIWTAEDQLDGsLEDNLDLPHHGLADSSADLSCDSR (V) EQQT(0.0)RPIWT(0.0)AEDQLDGS(0.99)LEDNLDLPHHGLADS(0.0)S(0.0)ADLS(0.0)CDS(0.0)R C:Carbamidomethylation,s:Phosphorylated S TJP3 103593.6 1 18 125.1 544.41 HUMAN 1 14.1018 2.9562 AEDSEPESDGEAGIE-p Q9UHR5;S22-p AEDSEPESDGEAGIE 0.303353445531215 0.0302980075022781 0.151 0.274333333333333 9.7100885037144 20.5371226411805 0.151 0.274333333333333 0.106903309346033 0.00883665166813468 1.93138401205565 3.99131912923975 Q9UHR5 SAP30BP Q9UHR5.S22.p_SAP30BP Q9UHR5_S22s _1_1_22_22 Q9UHR5 Q9UHR5|Q9UHR5-2|X6R3T8|J3KRU5|F5H478 SAP30-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32251.32897.4 27.73 29.4 1.111 6 1 1 0 966.2112 3781.8544 S22s TMT10 6 (K) NVLSSLAVYAEDSEPEsDGEAGIEAVGSAAEEK (G) NVLS(0.0)S(0.0)LAVY(0.0)AEDS(0.0)EPES(0.99)DGEAGIEAVGS(0.0)AAEEK K:TMT10,s:Phosphorylated S SAP30BP 33983.9 15 1 1421.1 144.21 HUMAN 1 9.7101 20.5371 AEDVDVPSPDEKSVI-p H3BQK9;S312-p AEDVDVPSPDEKSVI 0.276322361958096 0.0096030148756331 0.155 0.427666666666667 10.5627274590436 28.4493058567988 0.155 0.427666666666667 0.087847064584671 0.00142912236028399 2.07966796504429 5.96503121990146 H3BQK9 NotFound H3BQK9.S312.p_NotFound H3BQK9_S312s _1_1_312_312 H3BQK9 H3BQK9|H3BPE1|Q9UPN3|Q9UPN3-2|Q9UPN3-3|Q9UPN3-4 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23896.23896.3 12.14 12.14 99 1 1 1 0 727.3613 2100.1113 S312s TMT10 302 (R) LLDAEDVDVPsPDEK (S) LLDAEDVDVPS(1.0)PDEK K:TMT10,s:Phosphorylated S MACF1 866539.7 1 1 472.1 301.95 HUMAN 1 10.5627 28.4493 AEEAAGASPAKANGQ-p P49006;S22-p AEEAAGASPAKANGQ 0.334197986028367 0.00285880061999736 -0.141666666666667 -0.862333333333333 8.88489971894003 38.4791138612936 -0.141666666666667 -0.862333333333334 0.129273655048256 0.000141934709711468 -1.78843856540223 -9.46789151135907 P49006 MARCKSL1 P49006.S22.p_MARCKSL1 P49006_S22s_1_1_22_22 P49006 P49006 MARCKS-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9410.9410.4 24.97 24.97 2.354 2 1 1 0 794.9016 3095.6325 S22s N27n TMT10 11 (R) GDVTAEEAAGAsPAKAnGQENGHVK (S) GDVT(0.0)AEEAAGAS(0.99)PAKAN(0.99)GQEN(0.0)GHVK K:TMT10,s:Phosphorylated S,n:Deamidated MARCKSL1 19585.5 16 2 402.1 327.42 HUMAN 1 -8.8849 -38.4791 AEEADRKYEEVARKL-p J3KN67;Y163-p AEEADRKYEEVARKL 0.30236319502448 0.744094978806159 0.457 -0.056 9.73485755613528 1.77174151008019 0.457 -0.056 0.106295344642045 0.665006436799795 1.93568075710586 -0.457586466839029 J3KN67 TPM3 J3KN67.Y163.p_TPM3 J3KN67_Y163y _1_1_163_163 J3KN67 P06753|J3KN67|P67936-2|P06753-2|P06753-5|P06753-6 Tropomyosin alpha-3 chain GG20160819_MSz_CCLE_T4D7_pY_Injection_02.9344.9344.4 9.15 4.71 99 1 1 1 0 589.3006 2274.2243 Y163y TMT10 154 (K) HIAEEADRKyEEVAR (K) HIAEEADRKY(1.0)EEVAR K:TMT10,y:Phosphorylated Y TPM3 33450.2 1 1 366.1 9.15 HUMAN 1 9.7349 -1.7717 AEEEEASTEEEDKEG-p A0A0G2JPP5;T689-p AEEEEASTEEEDKEG 0.425266233604415 0.0694882415719225 0.116666666666667 0.245 6.84091654871292 15.3991147123604 0.116666666666667 0.245 0.206970450575784 0.0288461945848736 1.43313674582546 2.95165677212679 A0A0G2JPP5 SCRIB A0A0G2JPP5.T689.p_SCRIB A0A0G2JPP5_S688sT689t_2_2_688_689 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15837.15837.3 19.97 19.97 9.169 4 2 2 0 1046.8042 2978.473 S688s T689t Hydrogen 682 (R) AEEEEAstEEEDKEGAVVSAPSVK (G) AEEEEAS(0.99)T(0.99)EEEDKEGAVVS(0.0)APS(0.0)VK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T SCRIB 178690.9 3 43 22.1 1004.81 HUMAN 1 6.8409 15.3991 AEEEQQDSGSEPRGD-p Q9UJV9;S66-p AEEEQQDSGSEPRGD 0.569737548726187 0.0158314452330284 0.166 0.52 4.49580287322896 24.8830812040971 0.166 0.52 0.355156455209887 0.00324856738372451 1.01079339152515 5.00801309895957 Q9UJV9 DDX41 Q9UJV9.S66.p_DDX41 Q9UJV9_S66s _1_1_66_66 Q9UJV9 Q9UJV9|D6RGI7 Probable ATP-dependent RNA helicase DDX41 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3649.3649.3 11.15 11.15 1.156 2 1 1 0 633.605 1818.8303 S66s TMT10 57 (K) GAAEEEQQDsGSEPR (G) GAAEEEQQDS(0.99)GS(0.0)EPR s:Phosphorylated S DDX41 70521.1 2 4 1480.1 138.65 HUMAN 1 4.4958 24.8831 AEEFGNLTPEQLAAP-p Q9NW08;T12-p AEEFGNLTPEQLAAP 0.538631469589834 0.0164124418978191 0.0986666666666667 0.344 4.96812435778163 24.6477227440009 0.0986666666666667 0.344 0.31855730181759 0.00342947566561029 1.0982134620867 4.94904165846282 Q9NW08 POLR3B Q9NW08.T12.p_POLR3B Q9NW08_T12t _1_1_12_12 Q9NW08 Q9NW08 DNA-directed RNA polymerase III subunit RPC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.37543.37543.3 20.61 18.8 8.309 2 1 1 0 1064.8596 3112.5962 T12t Acetyl 1 (-) MDVLAEEFGNLtPEQLAAPIPTVEEK (W) MDVLAEEFGNLT(0.99)PEQLAAPIPT(0.0)VEEK K:TMT10,t:Phosphorylated T POLR3B 129323.2 3 1 4742.1 27.17 HUMAN 1 4.9681 24.6477 AEEFNDDTD______-p Q8WU17;T663-p AEEFNDDTD______ 0.191102046396083 0.865180315175624 0.234666666666667 0.0223333333333334 14.043911131891 0.886771888213995 0.234666666666667 0.0223333333333334 0.0394102225021064 0.81531007900024 2.7009842143872 0.245206312818345 Q8WU17 RNF139 Q8WU17.T663.p_RNF139 Q8WU17_T663t _1_1_663_663 Q8WU17 Q8WU17 E3 ubiquitin-protein ligase RNF139 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13221.13221.2 26.45 26.45 17.464 2 1 1 0 1156.9951 2233.0207 T663t TMT10 646 (R) NGVIQHTGAAAEEFNDDtD (-) NGVIQHT(0.0)GAAAEEFNDDT(0.99)D t:Phosphorylated T RNF139 76905 8 2 3311.1 54.25 HUMAN 1 14.0439 0.8868 AEEGEVRTPTKIKEL-p Q9H4G0;T475-p AEEGEVRTPTKIKEL 0.18878716220005 0.0164425845051409 -0.210666666666667 -0.466666666666667 14.1755611076704 24.6371598413324 -0.210666666666667 -0.466666666666667 0.0382334852874352 0.00343782698213942 -2.72520910423934 -4.94640636020369 Q9H4G0 EPB41L1 Q9H4G0.T475.p_EPB41L1 Q9H4G0_T475t _1_1_475_475 Q9H4G0 Q9H4G0|A0A0C4DH22|Q9H4G0-2|Q9H4G0-3|Q9H4G0-4 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5044.5044.2 12.21 12.21 1.494 3 1 1 0 871.4131 1661.8544 T475t Hydrogen 466 (R) SEAEEGEVRtPTK (I) S(0.0)EAEEGEVRT(0.99)PT(0.0)K K:TMT10-Lys-Only,t:Phosphorylated T EPB41L1 99071.6 3 8 174.1 483.37 HUMAN 1 -14.1756 -24.6372 AEEKDGHSPMSKGLV-p E9PGC8;S2902-p AEEKDGHSPMSKGLV 0.233397292175924 0.0112041909396015 0.502 -0.603333333333333 12.1381745845119 27.3111916184164 0.502 -0.603333333333333 0.0611198868473184 0.0018572947801103 2.3568671154445 -5.6460576615832 E9PGC8 NotFound E9PGC8.S2902.p_NotFound E9PGC8_S2902s _1_1_2902_2902 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8404.8404.4 15.35 13.09 1.512 7 1 1 0 721.8649 2804.4703 S2902s TMT10 2887 (R) STTSQVTPAEEKDGHsPMSK (G) S(0.0)T(0.0)T(0.0)S(0.0)QVT(0.0)PAEEKDGHS(0.99)PMS(0.0)K K:TMT10,s:Phosphorylated S MAP1A 332906.7 4 44 20.1 1016.98 HUMAN 1 12.1382 -27.3112 AEEKLDRSHDKSDRG-p O60828;S106-p AEEKLDRSHDKSDRG 0.0507410919483046 0.00880962755437148 -0.715333333333333 -1.07133333333333 28.4484143763535 29.1289571277421 -0.715333333333334 -1.07133333333333 0.00142941574771148 0.00122209308640453 -5.97359283446752 -6.16202687154881 O60828 PQBP1 O60828.S106.p_PQBP1 O60828_S106s _1_1_106_106 O60828 O60828|O60828-2|O60828-3 Polyglutamine-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6470.6470.4 7.14 7.14 7.145 3 1 1 0 643.0776 2489.3199 S106s TMT10 94 (R) SSNADAEEKLDRsHDK (S) S(0.0)S(0.0)NADAEEKLDRS(0.99)HDK K:TMT10,s:Phosphorylated S PQBP1 30528.8 1 2 4294.1 34.06 HUMAN 1 -28.4484 -29.129 AEEKSPISINVKTVK-p Q9UK58;S355-p AEEKSPISINVKTVK 0.434815870827855 0.167123906469835 0.138666666666667 0.243333333333333 6.66453047940514 10.2192860425723 0.138666666666667 0.243333333333333 0.215549466389547 0.0950761080961604 1.40215357371135 2.01899828167185 Q9UK58 CCNL1 Q9UK58.S355.p_CCNL1 Q9UK58_S352sS355s_2_2_352_355 Q9UK58 Q9UK58|Q9UK58-6 Cyclin-L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17494.17494.4 7.26 7.26 99 2 2 2 0 687.6346 2587.5841 S352s S355s TMT10 345 (R) EVKAEEKsPIsINVK (T) EVKAEEKS(1.0)PIS(1.0)INVK K:TMT10,s:Phosphorylated S CCNL1 60031.9 1 9 883.1 206.76 HUMAN 1 6.6645 10.2193 AEEKTSPSQEDLLMQ-p Q5THK1;S157-p AEEKTSPSQEDLLMQ 0.468752455569706 0.340923598689107 -0.105333333333333 0.122333333333333 6.07218583849882 6.19037060162885 -0.105333333333333 0.122333333333333 0.247048041970661 0.240415763443627 -1.29741270081612 1.31808356629325 Q5THK1 PRR14L Q5THK1.S157.p_PRR14L Q5THK1_S157s _1_1_157_157 Q5THK1 Q5THK1 Protein PRR14L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17915.17915.3 10.92 10.92 1.317 5 1 1 0 697.0124 2009.0625 S157s TMT10 154 (K) TSPsQEDLLMQSSK (E) T(0.0)S(0.0)PS(0.99)QEDLLMQS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S PRR14L 241289.3 1 1 1413.1 145.23 HUMAN 1 -6.0722 6.1904 AEEQRVHSPPASLVP-p Q9BTE3;S298-p AEEQRVHSPPASLVP 0.771982430720165 0.420407827165053 -0.052 0.222 2.15086018677853 5.01014552923638 -0.052 0.222 0.609416181071546 0.315489890300746 -0.541957846236112 1.10569314854838 Q9BTE3 MCMBP Q9BTE3.S298.p_MCMBP Q9BTE3_S298s _1_1_298_298 Q9BTE3 Q9BTE3|Q9BTE3-2|Q9BTE3-3 Mini-chromosome maintenance complex-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12704.12914.3 14.24 11.84 13.776 2 1 1 0 490.2676 1388.8212 S298s TMT10 296 (R) VHsPPASLVPR (I) VHS(0.99)PPAS(0.0)LVPR s:Phosphorylated S MCMBP 73834.6 4 5 2833.1 68.66 HUMAN 1 -2.1509 5.0101 AEESQYDSGIESLRS-p O00221;S157-p AEESQYDSGIESLRS 0.56732930889055 0.12675992441163 0.095 0.162 4.53331437324747 11.8247973777386 0.095 0.162 0.35210205734448 0.0656931765241179 1.01779595555146 2.30016854517566 O00221 NFKBIE O00221.S157.p_NFKBIE O00221_S157s _1_1_157_157 O00221 O00221|Q7LC14|H3BNC2 NF-kappa-B inhibitor epsilon HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14303.14303.3 13.07 13.07 1.426 4 1 1 0 883.4193 2568.283 S157s TMT10 145 (R) KGPDEAEESQYDsGIESLR (S) KGPDEAEES(0.0)QY(0.0)DS(0.99)GIES(0.0)LR K:TMT10,s:Phosphorylated S NFKBIE 53547.3 1 1 2907.1 66.26 HUMAN 1 4.5333 11.8248 AEETEGPSDGESAAE-p Q92766;S1475-p AEETEGPSDGESAAE 0.548579795198745 0.350537128992444 0.0793333333333333 0.0923333333333333 4.81228072686564 6.03539233550337 0.0793333333333333 0.0923333333333334 0.330196090784605 0.249149928255939 1.06954257144623 1.29055728988431 Q92766 RREB1 Q92766.S1475.p_RREB1 Q92766_S1475s _1_1_1475_1475 Q92766 Q92766-2|A0A087X055|Q92766-4 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12881.12881.2 20.38 20.38 3.795 3 1 1 0 1129.5256 2178.0814 S1475s TMT10 1467 (K) LAEETEGPsDGESAAEK (R) LAEET(0.0)EGPS(0.99)DGES(0.0)AAEK K:TMT10,s:Phosphorylated S RREB1 184269.8 4 25 179.1 480.48 HUMAN 1 4.8123 6.0354 AEEYLEQSEEKLWLG-p B4E0T2;S188-p AEEYLEQSEEKLWLG 0.373235049738538 0.283015814932509 -0.199333333333333 0.125 7.93287791697221 7.22909116060865 -0.199333333333333 0.125 0.160957867045381 0.189273966705457 -1.62351451994169 1.50062954378187 B4E0T2 PEX5 B4E0T2.S188.p_PEX5 B4E0T2_S188s _1_1_188_188 B4E0T2 B4E0T2 Peroxisomal targeting signal 1 receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21280.21280.3 11.63 11.63 6.695 2 1 1 0 693.6635 1999.0061 S188s TMT10 180 (R) WAEEYLEQsEEK (L) WAEEY(0.0)LEQS(0.99)EEK K:TMT10,s:Phosphorylated S PEX5 73580.7 1 1 4613.1 28.81 HUMAN 1 -7.9329 7.2291 AEFAEYASVDRNKKC-p Q9NWQ8;S229-p AEFAEYASVDRNKKC 0.358160899463675 0.0943067373262754 -0.168333333333333 -0.545666666666667 8.28343508411104 13.5631625745448 -0.168333333333333 -0.545666666666667 0.148476079526217 0.044023416396389 -1.68429667091237 -2.61155054032713 Q9NWQ8 PAG1 Q9NWQ8.S229.p_PAG1 Q9NWQ8_S229s _1_1_229_229 Q9NWQ8 Q9NWQ8 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17200.17216.5 16.97 16.97 2.388 3 1 1 0 732.9938 3580.9781 S229s TMT10 212 (K) ELPGPQTEGKAEFAEYAsVDRNKK (C) ELPGPQT(0.0)EGKAEFAEY(0.0)AS(0.99)VDRNKK K:TMT10,s:Phosphorylated S PAG1 47436.2 1 3 1594.1 129.17 HUMAN 1 -8.2834 -13.5632 AEFSRPASVSENHDA-p Q9H4G0;S441-p AEFSRPASVSENHDA 0.582575200829836 0.864195916578528 -0.0946666666666667 -0.037 4.31845228311996 0.894389335704564 -0.0946666666666667 -0.037 0.369960000778494 0.813881293111328 -0.977533307788647 -0.247149178119836 Q9H4G0 EPB41L1 Q9H4G0.S441.p_EPB41L1 Q9H4G0_S437sS441s_2_2_437_441 Q9H4G0 Q9H4G0|A0A0C4DH22 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11097.11097.5 14 14 1.132 5 2 2 0 873.3855 4202.9611 S437s S441s TMT10 430 (R) SLDGAEFsRPAsVSENHDAGPDGDKRDEDGESGGQR (S) S(0.0)LDGAEFS(0.99)RPAS(0.99)VS(0.0)ENHDAGPDGDKRDEDGES(0.0)GGQR K:TMT10,s:Phosphorylated S EPB41L1 99071.6 1 26 174.1 483.37 HUMAN 1 -4.3185 -0.8944 AEGDEAESPEQQVRK-p Q8TEH3;S546-p AEGDEAESPEQQVRK 0.335595821401977 0.0129179619390373 0.163666666666667 0.428 8.8448702180892 26.2985603555176 0.163666666666667 0.428 0.130470695712328 0.00234500603346292 1.78150953336335 5.37319572942405 Q8TEH3 DENND1A Q8TEH3.S546.p_DENND1A Q8TEH3_S546s _1_1_546_546 Q8TEH3 Q8TEH3-6|Q8TEH3-7 DENN domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6024.6024.3 22.72 22.72 11.862 3 1 1 0 757.9863 2191.9788 S546s TMT10 535 (R) ESDSAEGDEAEsPEQQVR (K) ES(0.0)DS(0.0)AEGDEAES(0.99)PEQQVR s:Phosphorylated S DENND1A 111202.8 5 4 882.1 207.04 HUMAN 1 8.8449 26.2986 AEGEAVRTPQSVTAK-p Q86UE4;T143-p AEGEAVRTPQSVTAK 0.893308309460576 0.0078345649628161 -0.0196666666666667 -0.454 0.958377371673307 30.0433905472596 -0.0196666666666667 -0.454 0.801977645498166 0.000990058701932876 -0.263404993215505 -6.43511660810432 Q86UE4 MTDH Q86UE4.T143.p_MTDH Q86UE4_T143t _1_1_143_143 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13622.13622.4 17.31 17.31 2.211 4 1 1 0 628.3376 2430.3604 T143t TMT10 132 (R) TVEVAEGEAVRtPQSVTAK (Q) T(0.0)VEVAEGEAVRT(0.99)PQS(0.0)VT(0.0)AK K:TMT10,t:Phosphorylated T MTDH 63892.9 5 4 77.1 644.48 HUMAN 1 -0.9584 -30.0434 AEGGQNNSEEKKEYF-p Q9BY67-3;S463-p AEGGQNNSEEKKEYF 0.401454832845887 0.0320543638596711 0.142 0.338333333333333 7.31552270426662 20.1757636141137 0.142 0.338333333333333 0.185544348018801 0.00960336948794257 1.51613856725887 3.91307030675632 Q9BY67 CADM1 Q9BY67.3.S463.p_CADM1 Q9BY67-3_S463s _1_1_463_463 Q9BY67-3 Q9BY67-3|Q9BY67-4|Q9BY67-5|A0A087X1W8 Isoform 3 of Cell adhesion molecule 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15571.15571.3 21.75 21.75 5.22 2 1 1 0 1124.5491 3291.6544 S463s TMT10 442 (K) GADDAADADTAIINAEGGQNNsEEKK (E) GADDAADADT(0.0)AIINAEGGQNNS(0.99)EEKK K:TMT10,s:Phosphorylated S CADM1 51988.7 2 2 3878.1 41.43 HUMAN 1 7.3155 20.1758 AEGKRNRSDTEQEGK-p Q13769;S28-p AEGKRNRSDTEQEGK 0.0782221681558717 0.140989165276238 0.359 0.153333333333333 23.6225860165141 11.2108941017307 0.359 0.153333333333333 0.00434251571071368 0.0756677098440974 4.70316784959877 2.1920879338926 Q13769 THOC5 Q13769.S28.p_THOC5 Q13769_S28s _1_1_28_28 Q13769 Q13769 THO complex subunit 5 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4174.4174.3 11.42 11.42 2.065 2 1 1 0 567.9459 1621.8546 S28s TMT10 26 (R) NRsDTEQEGK (Y) NRS(0.99)DT(0.0)EQEGK K:TMT10,s:Phosphorylated S THOC5 79248.1 2 2 2086.1 98.12 HUMAN 1 23.6226 11.2109 AEGLALDSPWHRFRR-p Q8N0Y2;S18-p AEGLALDSPWHRFRR 0.102111853260698 0.816507421468261 0.335666666666667 0.038 20.9663285845395 1.23235916094719 0.335666666666667 0.038 0.00800510700495818 0.752946439404355 4.08947273899546 0.331155195925683 Q8N0Y2 ZNF444 Q8N0Y2.S18.p_ZNF444 Q8N0Y2_S18s _1_1_18_18 Q8N0Y2 Q8N0Y2|Q8N0Y2-2 Zinc finger protein 444 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29090.29090.3 16.38 15.28 99 1 1 1 0 938.4651 2733.4232 S18s Acetyl 1 (-) MEVAVPVKQEAEGLALDsPWHR (F) MEVAVPVKQEAEGLALDS(1.0)PWHR K:TMT10,s:Phosphorylated S ZNF444 35830.9 1 1 2043.1 101.06 HUMAN 1 20.9663 1.2324 AEGLTPRSGTTPKPV-p Q99459;S427-p AEGLTPRSGTTPKPV 0.0741090610494485 0.142442392446714 -0.514333333333333 0.162666666666667 24.2349214743131 11.1526285984115 -0.514333333333334 0.162666666666667 0.0037714456417891 0.0766897178860185 -4.8525793711893 2.18187094095611 Q99459 CDC5L Q99459.S427.p_CDC5L Q99459_S427sS437sT438t_3_3_427_438 Q99459 Q99459 Cell division cycle 5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13859.13859.5 8.19 8.19 1.267 6 3 3 0 630.7266 2909.714 S427s S437s T438t TMT10 427 (R) sGTTPKPVINstPGRTPLRDK (L) S(0.99)GT(0.0)T(0.0)PKPVINS(0.99)T(0.99)PGRT(0.0)PLRDK K:TMT10,s:Phosphorylated S,t:Phosphorylated T CDC5L 92477.2 2 19 751.1 232.35 HUMAN 1 -24.2349 11.1526 AEGPELVSLQVLDQH-p Q29980;S345-p AEGPELVSLQVLDQH 0.430275482317801 0.10699397279063 0.127666666666667 -0.201666666666667 6.74497874682188 12.8241171787479 0.127666666666667 -0.201666666666667 0.211593404001516 0.0521901184018883 1.41629501919755 -2.47808387212002 Q29980 MICB Q29980.S345.p_MICB Q29980_S345s _1_1_345_345 Q29980 Q29980|X6R344|A0A0G2JH58|A0A140T9M6|F5H7Q8 MHC class I polypeptide-related sequence B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20927.20927.4 16.15 16.15 4.978 4 1 1 0 756.376 2942.5169 S345s TMT10 335 (K) TSAAEGPELVsLQVLDQHPVGTGDHR (D) T(0.0)S(0.0)AAEGPELVS(0.99)LQVLDQHPVGT(0.0)GDHR s:Phosphorylated S MICB 43158.8 1 1 4352.1 32.89 HUMAN 1 6.745 -12.8241 AEGPGQRSRLASMLD-p Q96HP0;S1190-p AEGPGQRSRLASMLD 0.0971239448724399 0.0140098145691208 -0.638 -0.787333333333333 21.4745769746807 25.7192329030357 -0.638 -0.787333333333333 0.0071210215905975 0.00267964158973238 -4.20280151755431 -5.22151045352639 Q96HP0 DOCK6 Q96HP0.S1190.p_DOCK6 Q96HP0_S1190s _1_1_1190_1190 Q96HP0 Q96HP0 Dedicator of cytokinesis protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7838.7838.3 13.8 13.8 99 1 1 1 0 593.6221 1698.8873 S1190s TMT10 1179 (R) LHDFAEGPGQRsR (L) LHDFAEGPGQRS(1.0)R s:Phosphorylated S DOCK6 231436.7 1 3 1743.1 118.18 HUMAN 1 -21.4746 -25.7192 AEGRRSPSPYSLKCS-p Q9ULD4;S19-p AEGRRSPSPYSLKCS 0.81888464545651 0.198008576778493 -0.034 0.199333333333333 1.67203418189965 9.25327441749591 -0.034 0.199333333333333 0.680450569369461 0.118760647905932 -0.434881168277431 1.85152847760059 Q9ULD4 BRPF3 Q9ULD4.S19.p_BRPF3 Q9ULD4_S17sS19s_2_2_17_19 Q9ULD4 Q9ULD4|E9PI60|Q9ULD4-2 Bromodomain and PHD finger-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14518.14518.2 8.65 8.65 8.653 4 2 2 0 634.2838 1107.6247 S17s S19s Hydrogen 17 (R) sPsPYSLK (C) S(0.99)PS(0.99)PY(0.0)S(0.0)LK K:TMT10-Lys-Only,s:Phosphorylated S BRPF3 137397.1 5 5 1814.1 113.02 HUMAN 1 -1.672 9.2533 AEHMFPKSQE_____-p Q9UH62;S377-p AEHMFPKSQE_____ 0.647342264442296 0.471745090119239 0.0616666666666667 0.0876666666666667 3.53918258736113 4.34931309882582 0.0616666666666667 0.0876666666666667 0.442671682511104 0.367340396238756 0.8279510762393 0.98316208919383 Q9UH62 ARMCX3 Q9UH62.S377.p_ARMCX3 Q9UH62_S377s _1_1_377_377 Q9UH62 Q9UH62 Armadillo repeat-containing X-linked protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16754.16754.3 10.01 10.01 99 1 1 1 0 618.9784 1774.9562 S377s TMT10 369 (K) LAEHMFPKsQE (-) LAEHMFPKS(1.0)QE K:TMT10,s:Phosphorylated S ARMCX3 42842.2 1 5 2535.1 79.58 HUMAN 1 3.5392 4.3493 AEIEEKGSDGAASSY-p Q14203;S351-p AEIEEKGSDGAASSY 0.751416123882136 0.8143097156721 0.0533333333333333 0.0333333333333333 2.36588904190111 1.2484693481538 0.0533333333333333 0.0333333333333334 0.579977433500738 0.750158552836889 0.588388239714187 0.335059114886048 Q14203 DCTN1 Q14203.S351.p_DCTN1 Q14203_S351s _1_1_351_351 Q14203 Q14203|Q14203-6|E7EX90|Q14203-4 Dynactin subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35864.35864.5 11.41 11.41 2.664 6 1 1 0 907.6866 4454.4324 S351s TMT10 330 (K) ERVDELTTDLEILKAEIEEKGsDGAASSYQLK (Q) ERVDELT(0.0)T(0.0)DLEILKAEIEEKGS(0.99)DGAAS(0.0)S(0.0)Y(0.0)QLK K:TMT10,s:Phosphorylated S DCTN1 142434.1 1 3 2852.1 68.06 HUMAN 1 2.3659 1.2485 AEIEFAVSRVDLYIK-p Q96M69;S560-p AEIEFAVSRVDLYIK 0.801534193428332 0.0473008070373341 0.0513333333333333 -0.297666666666667 1.84988637332455 17.7293700393439 0.0513333333333333 -0.297666666666667 0.653147641058049 0.0168679768406058 0.475295558031666 -3.40496576076546 Q96M69 LRGUK Q96M69.S560.p_LRGUK Q96M69_S560s _1_1_560_560 Q96M69 Q96M69 Leucine-rich repeat and guanylate kinase domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21765.21765.4 8.05 1.8 2.065 3 1 1 0 784.6889 3055.7821 S560s Hydrogen 546 (R) RKGLFSRAEIEFAVsRVDLYIK (I) RKGLFS(0.0)RAEIEFAVS(0.99)RVDLY(0.0)IK K:TMT10-Lys-Only,s:Phosphorylated S LRGUK 94472.6 1 1 7039.1 8.05 HUMAN 1 1.8499 -17.7294 AEIISPPSPDRPPHS-p Q03164-3;S2124-p AEIISPPSPDRPPHS 0.560668846532537 0.436590223286727 0.114666666666667 0.0813333333333334 4.63055984043996 4.79529765617231 0.114666666666667 0.0813333333333334 0.344305544154759 0.331489849426196 1.03589926475373 1.06620020065548 Q03164 KMT2A Q03164.3.S2124.p_KMT2A Q03164-3_S2124s_1_1_2124_2124 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15519.15519.5 11.15 11.15 1.742 11 1 1 0 842.6111 4128.0497 N2115n S2124s TMT10 2112 (K) ESQnTAEIISPPsPDRPPHSQTSGSCYYHVISK (V) ES(0.0)QN(1.0)T(0.0)AEIIS(0.0)PPS(0.99)PDRPPHS(0.0)QT(0.0)S(0.0)GS(0.0)CY(0.0)Y(0.0)HVIS(0.0)K C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S KMT2A 436608.3 1 26 26.1 936.8 HUMAN 1 4.6306 4.7953 AEKAVDSSSEEIEVE-p Q9Y6X4;S636-p AEKAVDSSSEEIEVE 0.430275482317801 0.0493298253012147 -0.106833333333333 0.236666666666667 6.74482294439332 17.4820671665085 -0.106833333333333 0.236666666666667 0.211600995016122 0.0178563744005146 -1.41626764873417 3.35554553525958 Q9Y6X4 FAM169A Q9Y6X4.S636.p_FAM169A Q9Y6X4_S635sS636s_2_2_635_636 Q9Y6X4 Q9Y6X4|D6RB01 Soluble lamin-associated protein of 75 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21951.21951.3 12.73 12.73 1.356 3 2 2 0 835.3903 2344.2194 S635s S636s TMT10 632 (K) AVDssSEEIEVEVPVVDRR (N) AVDS(0.99)S(0.99)S(0.0)EEIEVEVPVVDRR s:Phosphorylated S FAM169A 75295.8 4 17 731.1 236 HUMAN 2 -6.7448 17.4821 AEKDLLHSEGSENEG-p Q9NY27;S361-p AEKDLLHSEGSENEG 0.963352655739629 0.0975938491964064 -0.00766666666666667 0.231333333333333 0.311611048223702 13.3620261222514 -0.00766666666666669 0.231333333333333 0.930762538016746 0.0461102405396314 -0.0910049815131572 2.57505120870953 Q9NY27 PPP4R2 Q9NY27.S361.p_PPP4R2 Q9NY27_S361sS364s_2_2_361_364 Q9NY27 Q9NY27|Q9NY27-3|Q9NY27-2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17816.17816.4 17.56 17.56 8.017 11 2 2 0 1057.7129 4067.8988 S361s S364s TMT10 357 (K) DLLHsEGsENEGPVSSSSSDCRETEELVGSNSSK (T) DLLHS(0.99)EGS(0.99)ENEGPVS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)DCRET(0.0)EELVGS(0.0)NS(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PPP4R2 47296.6 1 7 1705.1 120.12 HUMAN 1 -0.3116 13.362 AEKELTDSPATSKRI-p Q15911;S1189-p AEKELTDSPATSKRI 0.151837827094672 0.00557905206687529 -0.413666666666667 -0.537666666666667 16.4861663765849 32.6570244446385 -0.413666666666667 -0.537666666666667 0.0224586352761263 0.000542372367897985 -3.16210485844261 -7.27018337355826 Q15911 ZFHX3 Q15911.S1189.p_ZFHX3 Q15911_S1189s _1_1_1189_1189 Q15911 Q15911|Q15911-2 Zinc finger homeobox protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10720.10720.2 13.09 7.67 1.451 4 1 1 0 793.9073 1506.8416 S1189s TMT10 1185 (K) ELTDsPATSK (R) ELT(0.0)DS(0.99)PAT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ZFHX3 409090.1 1 5 529.1 281.73 HUMAN 1 -16.4862 -32.657 AEKEVPWSPSAEKAS-p Q5JSZ5;S556-p AEKEVPWSPSAEKAS 0.0482466396076474 0.00759823237991491 -0.460666666666667 -0.663333333333333 29.2147634637437 30.2617182389458 -0.460666666666667 -0.663333333333334 0.00119818437990905 0.000941517021841932 -6.19672591940524 -6.50172461504778 Q5JSZ5 PRRC2B Q5JSZ5.S556.p_PRRC2B Q5JSZ5_S556s _1_1_556_556 Q5JSZ5 Q5JSZ5|Q5JSZ5-5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18351.18351.2 15.83 9.22 2.665 2 1 1 0 834.4254 1587.8783 S556s TMT10 552 (K) EVPWsPSAEK (A) EVPWS(0.99)PS(0.0)AEK K:TMT10,s:Phosphorylated S PRRC2B 244103.4 5 59 36.2 882.05 HUMAN 1 -29.2148 -30.2617 AEKFACLSPGYYSPD-p Q6UB99;S1847-p AEKFACLSPGYYSPD 0.251728832793614 0.0155209282366236 -0.179666666666667 -0.399333333333333 11.4242646129546 25.0138941767592 -0.179666666666667 -0.399333333333333 0.0720399725566213 0.00315217690173773 -2.23061111835187 -5.04100024364892 Q6UB99 ANKRD11 Q6UB99.S1847.p_ANKRD11 Q6UB99_S1847s _1_1_1847_1847 Q6UB99 Q6UB99 Ankyrin repeat domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29003.29003.3 17.76 11.24 1.14 6 1 1 0 886.4306 2577.31 S1847s TMT10 1843 (K) FACLsPGYYSPDYGLPSPK (V) FACLS(0.99)PGY(0.0)Y(0.0)S(0.0)PDY(0.0)GLPS(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANKRD11 299790.8 3 21 340.1 353.72 HUMAN 1 -11.4243 -25.0139 AEKKVTLSYSKNLKP-p A0A0A0MR88;S520-p AEKKVTLSYSKNLKP 0.0891404210042399 0.00776608534106451 -0.34 -0.515333333333333 22.3575887915534 30.109582285674 -0.34 -0.515333333333333 0.00581086948185585 0.000975083418951751 -4.4041832610066 -6.45525240005349 A0A0A0MR88 NotFound A0A0A0MR88.S520.p_NotFound A0A0A0MR88_S520s _1_1_520_520 A0A0A0MR88 A0A0A0MR88|A0A096LPC5|Q9Y4E1-4|Q9Y4E1-2 WASH complex subunit 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14083.14083.3 7.75 7.75 2.209 4 1 1 0 565.0016 1613.0241 S520s TMT10 516 (K) KVTLsYSK (N) KVT(0.0)LS(0.99)Y(0.0)S(0.0)K K:TMT10,s:Phosphorylated S WASHC2C 147223 2 4 12.99 1178.3 HUMAN 1 -22.3576 -30.1096 AEKLEALSVKEETKE-p P43487;S188-p AEKLEALSVKEETKE 0.204390936904906 0.00641872087265848 -0.437666666666667 0.519333333333333 13.3520864682186 31.534719897865 -0.437666666666667 0.519333333333333 0.0462158934396328 0.000702308638302837 -2.57470882140737 6.90131822808273 P43487 RANBP1 P43487.S188.p_RANBP1 P43487_S188s _1_1_188_188 P43487 F6WQW2|P43487|P43487-2 Ran-specific GTPase-activating protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17477.17477.4 8.95 8.95 2.247 2 1 1 0 768.9184 2992.686 S188s TMT10 184 (K) LEALsVKEETKEDAEEKQ (-) LEALS(0.99)VKEET(0.0)KEDAEEKQ K:TMT10,s:Phosphorylated S RANBP1 23480.9 1 3 2775.1 71.11 HUMAN 1 -13.3521 31.5347 AEKNEEDSEGSSDED-p B5ME19;S178-p AEKNEEDSEGSSDED 0.480199874113572 0.00545576304484167 -0.128666666666667 0.838 5.86506464873544 32.8328678410679 -0.128666666666667 0.838 0.259115584932513 0.000520850656492855 -1.26048844777161 7.32944335413411 B5ME19 EIF3CL B5ME19.S178.p_EIF3CL B5ME19_S178sS181sS182s_3_3_178_182 B5ME19 B5ME19|Q99613|Q99613-2 Eukaryotic translation initiation factor 3 subunit C-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25113.25113.5 18.27 15.94 1.172 6 3 3 0 1009.6208 4804.1444 S178s S181s S182s TMT10 161 (K) QNPEQSADEDAEKNEEDsEGssDEDEDEDGVSAATFLK (K) QNPEQS(0.0)ADEDAEKNEEDS(0.99)EGS(0.99)S(0.99)DEDEDEDGVS(0.0)AAT(0.0)FLK K:TMT10,s:Phosphorylated S EIF3CL 106155.7 5 13 451.1 308.49 HUMAN 1 -5.8651 32.8329 AEKQLEESVSEKEQQ-p O95239;S951-p AEKQLEESVSEKEQQ 0.538878785012306 0.259809323330966 -0.107333333333333 -0.128666666666667 4.96033341113732 7.71206017688491 -0.107333333333333 -0.128666666666667 0.319129284774612 0.169353424251234 -1.09678394222305 -1.58468398668823 O95239 KIF4A O95239.S951.p_KIF4A O95239_S951s _1_1_951_951 O95239 O95239|O95239-2 Chromosome-associated kinesin KIF4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11317.11317.2 12.58 7.42 2.271 2 1 1 0 793.9076 1506.8416 S951s TMT10 947 (K) QLEEsVSEK (E) QLEES(0.99)VS(0.0)EK K:TMT10,s:Phosphorylated S KIF4A 141476.1 4 8 516.1 285.41 HUMAN 1 -4.9603 -7.7121 AEKQLNLSAMPVLTA-p Q8WUM0;S1021-p AEKQLNLSAMPVLTA 0.938242894464644 0.511377223604377 -0.0343333333333333 0.253 0.53943633190936 3.90642734804334 -0.0343333333333334 0.253 0.883194522244473 0.406777820632321 -0.153994435524235 0.899050661272608 Q8WUM0 NUP133 Q8WUM0.S1021.p_NUP133 Q8WUM0_S1021s _1_1_1021_1021 Q8WUM0 Q8WUM0 Nuclear pore complex protein Nup133 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.36810.36810.4 8.41 8.41 8.413 3 1 1 0 827.9379 3228.7434 S1021s TMT10 1017 (K) QLNLsAMPVLTAPQLIGLYICEENRR (A) QLNLS(0.99)AMPVLT(0.0)APQLIGLY(0.0)ICEENRR C:Carbamidomethylation,s:Phosphorylated S NUP133 130003.6 1 15 652.1 254.15 HUMAN 1 -0.5394 3.9064 AEKQSELSAEESPEK-p Q567U6;S301-p AEKQSELSAEESPEK 0.650660892622351 0.0464087076757773 -0.111 0.272666666666667 3.50082890796933 17.8385963314545 -0.111 0.272666666666667 0.446598344865416 0.0164490328094973 -0.820423205129475 3.42689982713147 Q567U6 CCDC93 Q567U6.S301.p_CCDC93 Q567U6_S301s _1_1_301_301 Q567U6 Q567U6|F8W9X7 Coiled-coil domain-containing protein 93 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10774.10774.3 14.72 12.36 3.314 3 1 1 0 624.6393 1791.9376 S301s TMT10 297 (K) QSELsAEESPEK (L) QS(0.0)ELS(0.99)AEES(0.0)PEK K:TMT10,s:Phosphorylated S CCDC93 73481.6 1 2 3247.1 56.09 HUMAN 1 -3.5008 17.8386 AEKRRRKSPGGGGGG-p E9PIM0;S189-p AEKRRRKSPGGGGGG 0.0559124300104654 0.0090322518183777 0.480666666666667 -0.451 27.2910717949591 28.9293340831093 0.480666666666667 -0.451 0.00186591914399106 0.00127957749061069 5.64843307640634 -6.10364750268723 E9PIM0 CREBZF E9PIM0.S189.p_CREBZF E9PIM0_S189s _1_1_189_189 E9PIM0 E9PIM0|Q9NS37 CREB/ATF bZIP transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3730.3730.4 16.13 13.93 1.101 3 1 1 0 689.3526 2674.4224 S189s TMT10 187 (R) RKsPGGGGGGGSGNDNNQAATK (S) RKS(0.99)PGGGGGGGS(0.0)GNDNNQAAT(0.0)K K:TMT10,s:Phosphorylated S CREBZF 37998.2 1 4 1443.1 141.64 HUMAN 1 27.2911 -28.9293 AEKSGSETPDGPLSP-p Q8IWI9-4;T1416-p AEKSGSETPDGPLSP 0.416710876927863 0.00999761844764785 0.181333333333333 0.492666666666667 7.01505266318278 28.0994610301988 0.181333333333333 0.492666666666667 0.198835869912275 0.00154900884267314 1.46364784494901 5.86555325681406 Q8IWI9 MGA Q8IWI9.4.T1416.p_MGA Q8IWI9-4_T1416tS1422s_2_2_1416_1422 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27288.27288.3 13.41 10.19 1.15 7 2 2 0 1235.2441 3543.7889 T1416t S1422s TMT10 1412 (K) SGSEtPDGPLsPGKMEDISPVQTDALDSVR (E) S(0.0)GS(0.0)ET(0.99)PDGPLS(0.99)PGKMEDIS(0.0)PVQT(0.0)DALDS(0.0)VR K:TMT10,t:Phosphorylated T,s:Phosphorylated S MGA 338321.5 1 27 141.1 523.06 HUMAN 1 7.0151 28.0995 AEKSYQNSPSSDDGI-p Q15648;S1479-p AEKSYQNSPSSDDGI 0.661253246820461 0.048358971768716 0.061 0.242 3.36321940302071 17.593429583578 0.061 0.242 0.460975728896333 0.0174043192748702 0.793268229283824 3.37775868494886 Q15648 MED1 Q15648.S1479.p_MED1 Q15648_S1479s _1_1_1479_1479 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15916.15916.4 17.27 17.27 2.84 8 1 1 0 752.8633 2928.4627 S1479s TMT10 1475 (K) SYQNsPSSDDGIRPLPEYSTEK (H) S(0.0)Y(0.0)QNS(0.99)PS(0.0)S(0.0)DDGIRPLPEY(0.0)S(0.0)T(0.0)EK K:TMT10,s:Phosphorylated S MED1 169445 5 27 115.1 566.87 HUMAN 1 3.3632 17.5934 AELASGQTPPESFLT-p Q9NS87;T399-p AELASGQTPPESFLT 0.456329906764675 0.303758048714723 0.107333333333333 0.103 6.28329831221091 6.83364055054367 0.107333333333333 0.103 0.235326138668821 0.207317491319716 1.334877924873 1.43147418184803 Q9NS87 KIF15 Q9NS87.T399.p_KIF15 Q9NS87_T399t _1_1_399_399 Q9NS87 Q9NS87|Q9NS87-2|Q9NS87-4|C9JKA9 Kinesin-like protein KIF15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28279.28279.3 11.16 11.16 1.136 4 1 1 0 951.8466 2773.55 T399t TMT10 387 (R) LKEQLAELASGQtPPESFLTR (D) LKEQLAELAS(0.0)GQT(0.99)PPES(0.0)FLT(0.0)R K:TMT10,t:Phosphorylated T KIF15 161127.4 3 2 2062.1 99.91 HUMAN 1 6.2833 6.8336 AELDEVGSWEEVSPA-p Q6ZUM4;S481-p AELDEVGSWEEVSPA 0.113368778794758 0.459051453654381 -0.286333333333333 -0.0716666666666666 19.7314990065596 4.5076460061946 -0.286333333333333 -0.0716666666666667 0.0106377578304835 0.354189269247668 -3.82156264516567 -1.01281746819917 Q6ZUM4 ARHGAP27 Q6ZUM4.S481.p_ARHGAP27 Q6ZUM4_S481s _1_1_481_481 Q6ZUM4 Q6ZUM4|A0A0G2JNY3|Q6ZUM4-3|Q6ZUM4-2 Rho GTPase-activating protein 27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25152.25152.4 28.75 28.75 4.864 7 1 1 0 1144.5502 4495.2153 S481s TMT10 455 (K) SSQDGDTPAQASPPEEKVPAELDEVGsWEEVSPATAAVR (T) S(0.0)S(0.0)QDGDT(0.0)PAQAS(0.0)PPEEKVPAELDEVGS(0.99)WEEVS(0.0)PAT(0.0)AAVR K:TMT10,s:Phosphorylated S ARHGAP27 99078.8 2 9 467.1 303.27 HUMAN 1 -19.7315 -4.5076 AELDRRASEKQKEIE-p Q9UKG1;S636-p AELDRRASEKQKEIE 0.578748260899784 0.112924439918613 -0.109 -0.295666666666667 4.36885420067992 12.4927347882542 -0.109 -0.295666666666667 0.36569125922783 0.0563282840261555 -0.98701183928718 -2.41878383171329 Q9UKG1 APPL1 Q9UKG1.S636.p_APPL1 Q9UKG1_S636s _1_1_636_636 Q9UKG1 Q9UKG1 DCC-interacting protein 13-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10417.10417.5 7.06 7 99 1 1 1 0 455.8522 2195.2661 S636s TMT10 624 (K) QIALHAELDRRAsEK (Q) QIALHAELDRRAS(1.0)EK K:TMT10,s:Phosphorylated S APPL1 80346.7 1 5 1784.1 115.11 HUMAN 1 -4.3689 -12.4927 AELDSSESEEETLHK-p Q08AE8;S467-p AELDSSESEEETLHK 0.813083216141779 0.76172764838597 0.033 -0.031 1.72525658687033 1.63325584415985 0.033 -0.031 0.672162595691552 0.686553547573385 0.447060287912829 -0.425913654992112 Q08AE8 SPIRE1 Q08AE8.S467.p_SPIRE1 Q08AE8_S464sS465sS467s_3_3_464_467 Q08AE8 Q08AE8|Q08AE8-2|Q08AE8-5|Q08AE8-3|J3KNG6|Q08AE8-4 Protein spire homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22857.22857.3 13.45 13.45 3.35 5 3 3 0 928.7427 2544.3081 S464s S465s S467s TMT10 456 (R) APTLAELDssEsEEETLHK (S) APT(0.0)LAELDS(0.99)S(0.99)ES(0.99)EEET(0.0)LHK K:TMT10,s:Phosphorylated S SPIRE1 86683.2 4 8 1694.1 120.62 HUMAN 1 1.7253 -1.6333 AELELELSEGDITQK-p A0A0U1RQW6;S27-p AELELELSEGDITQK 0.991004899675327 0.661698762454924 0.00199999999999999 -0.0456666666666667 0.081006627593123 2.45567942078494 0.00199999999999999 -0.0456666666666667 0.981520415365851 0.568109508182869 0.0242525390736635 -0.607430564225223 A0A0U1RQW6 NotFound A0A0U1RQW6.S27.p_NotFound A0A0U1RQW6_S27s _1_1_27_27 A0A0U1RQW6 A0A0U1RQW6|Q9Y2E4 Disco-interacting protein 2 homolog C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30477.30477.3 12.25 12.25 5.448 2 1 1 0 776.0772 2246.2532 S27s TMT10 19 (R) LAELELELsEGDITQK (G) LAELELELS(0.99)EGDIT(0.0)QK K:TMT10,s:Phosphorylated S DIP2C 180479.8 1 2 3066.1 61.65 HUMAN 1 0.081 -2.4557 AELELRVSEDEEKLP-p Q7RTP6;S1134-p AELELRVSEDEEKLP 0.0948633510902073 0.298620741305865 0.366 0.151333333333333 21.7145793197614 6.93002031534847 0.366 0.151333333333333 0.0067381716174677 0.202767323448603 4.25696428124444 1.44836184928035 Q7RTP6 MICAL3 Q7RTP6.S1134.p_MICAL3 Q7RTP6_S1134s _1_1_1134_1134 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23754.23754.4 10.11 4.28 1.882 2 1 1 0 940.9929 3680.966 S1134s TMT10 1119 (R) LPCPAEGEAELELRVsEDEEKLPASPK (H) LPCPAEGEAELELRVS(0.99)EDEEKLPAS(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MICAL3 225431.9 1 6 190.1 466.81 HUMAN 1 21.7146 6.93 AELGGDASEEDHPQV-p E7EW59;S26-p AELGGDASEEDHPQV 0.278656842374099 0.0575391609885465 0.209333333333333 0.251666666666667 10.4939746075181 16.5205579504495 0.209333333333333 0.251666666666667 0.0892488315974738 0.0222814887427036 2.06767687200982 3.16646379901917 E7EW59 SALL2 E7EW59.S26.p_SALL2 E7EW59_S26s _1_1_26_26 E7EW59 E7EW59|Q9Y467-3|A0A087X1T9 Sal-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18655.18655.4 15.13 15.13 99 1 1 1 0 815.8851 3180.5342 S26s TMT10 11 (R) LGVPCGEPAELGGDAsEEDHPQVCAK (C) LGVPCGEPAELGGDAS(1.0)EEDHPQVCAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SALL2 96608.7 1 1 179.2 480.48 HUMAN 1 10.494 16.5206 AELKDTQSPSTCSEG-p Q9C0C2;S712-p AELKDTQSPSTCSEG 0.443246131255934 0.00182687357791697 -0.133666666666667 -0.987333333333333 6.51287813050383 43.0946748814422 -0.133666666666667 -0.987333333333334 0.223209249353334 4.90379731889152e-05 -1.37544565861143 -11.6148638539179 Q9C0C2 TNKS1BP1 Q9C0C2.S712.p_TNKS1BP1 Q9C0C2_S712s _1_1_712_712 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19099.19099.3 18.45 13.79 1.142 6 1 1 0 1177.608 3450.8254 S712s TMT10 701 (R) RGAGAELKDTQsPSTCSEGLLGWSQK (D) RGAGAELKDT(0.0)QS(0.99)PS(0.0)T(0.0)CS(0.0)EGLLGWS(0.0)QK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TNKS1BP1 182819.3 10 23 4.1 2105.7 HUMAN 1 -6.5129 -43.0947 AELLLMGSYLGKPGP-p A8CG34;S126-p AELLLMGSYLGKPGP 0.513428275811225 0.311202762803988 -0.118333333333333 -0.103333333333333 5.34795851620885 6.70050412716743 -0.118333333333333 -0.103333333333333 0.291879872841751 0.213771393018545 -1.16745829656046 -1.40810683992613 A8CG34 NotFound A8CG34.S126.p_NotFound A8CG34_S126s_1_1_126_126 A8CG34 A8CG34|A0A075B7F8 Nuclear envelope pore membrane protein POM 121C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.33998.33998.4 22.28 22.28 1.489 3 1 1 0 1070.558 4183.2513 M124m S126s TMT10 111 (R) TLLEGPDPAELLLmGsYLGKPGPPQPAPAPEGQDLR (N) T(0.0)LLEGPDPAELLLM(1.0)GS(0.99)Y(0.0)LGKPGPPQPAPAPEGQDLR K:TMT10,m:Oxidized methionine,s:Phosphorylated S POM121C 125455.9 5 4 133.2 532.02 HUMAN 1 -5.348 -6.7005 AELPLPPSPTTVSSV-p A0A0U1RQK7;S456-p AELPLPPSPTTVSSV 0.137689822550301 0.049248751055522 0.282333333333333 -0.271666666666667 17.6302252121049 17.4912084026171 0.282333333333333 -0.271666666666667 0.01725748397529 0.0178188289848395 3.38781283813939 -3.35736638845151 A0A0U1RQK7 NotFound A0A0U1RQK7.S456.p_NotFound A0A0U1RQK7_S456s _1_1_456_456 A0A0U1RQK7 A0A0U1RQK7|A0A0A0MSA7|O43432-3|O43432-2 Eukaryotic translation initiation factor 4 gamma 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29750.29750.4 15.32 11.98 1.82 10 1 1 0 991.277 3882.1112 S456s TMT10 433 (K) KEQEGQTSETTAIVSIAELPLPPsPTTVSSVAR (S) KEQEGQT(0.0)S(0.0)ET(0.0)T(0.0)AIVS(0.0)IAELPLPPS(0.99)PT(0.0)T(0.0)VS(0.0)S(0.0)VAR K:TMT10,s:Phosphorylated S EIF4G3 196410.6 2 3 857.1 210.84 HUMAN 1 17.6302 -17.4912 AELQRRVSADSQPFQ-p Q96AX9-14;S366-p AELQRRVSADSQPFQ 0.560646744079127 0.00195877573093401 0.100333333333333 0.836666666666667 4.63135837188409 42.3544016276374 0.100333333333333 0.836666666666667 0.344242242975471 5.81513547916644e-05 1.03604762550839 11.2427549450518 Q96AX9 MIB2 Q96AX9.14.S366.p_MIB2 Q96AX9-14_S366s _1_1_366_366 Q96AX9-14 Q96AX9-14|Q96AX9-13|Q96AX9-11|Q96AX9-4|F2Z2L2|Q96AX9-7|D6RAZ0|Q96AX9-8|Q96AX9-10|Q96AX9-9|D6RED3|Q96AX9-3|Q96AX9-12|Q96AX9-2|Q96AX9-5|Q96AX9-6|E9PD12 Isoform 14 of E3 ubiquitin-protein ligase MIB2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7488.7488.3 14.6 14.6 1.127 2 1 1 0 704.0212 2030.082 S366s TMT10 364 (R) RVsADSQPFQHGDK (V) RVS(0.99)ADS(0.0)QPFQHGDK K:TMT10,s:Phosphorylated S MIB2 117741.4 3 1 6022.1 14.6 HUMAN 1 4.6314 42.3544 AELSEAESEGDEKPK-p Q3L8U1;S1472-p AELSEAESEGDEKPK 0.297330507583042 0.575592774769726 -0.196333333333333 -0.0633333333333333 9.91392418298688 3.23430381937755 -0.196333333333333 -0.0633333333333333 0.102001740340478 0.474864406323213 -1.96675994931982 -0.767500554772509 Q3L8U1 CHD9 Q3L8U1.S1472.p_CHD9 Q3L8U1_S1468sS1472s_2_2_1468_1472 Q3L8U1 Q3L8U1|Q3L8U1-3|Q3L8U1-2 Chromodomain-helicase-DNA-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18450.18450.5 14.82 14.82 10.743 5 2 2 0 814.6122 3909.0899 S1468s S1472s TMT10 1453 (K) QTRPFSATKDELAELsEAEsEGDEKPK (L) QT(0.0)RPFS(0.0)AT(0.0)KDELAELS(0.99)EAES(0.99)EGDEKPK K:TMT10,s:Phosphorylated S CHD9 328184.1 3 8 1062.1 182 HUMAN 1 -9.9139 -3.2343 AELVLDVSPKTQRVI-p Q5THJ4;S3628-p AELVLDVSPKTQRVI 0.778856264071077 0.935911741045061 0.051 -0.0163333333333333 2.08640433906183 0.406191456896919 0.051 -0.0163333333333333 0.618528287275155 0.910711570565384 0.52785299882598 -0.117476534374084 Q5THJ4 VPS13D Q5THJ4.S3628.p_VPS13D Q5THJ4_S3628s _1_1_3628_3628 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27869.27869.3 13.28 12.02 13.283 2 1 1 0 685.3696 1974.1346 S3628s TMT10 3617 (K) AITCAELVLDVsPK (T) AIT(0.0)CAELVLDVS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VPS13D 495672.3 1 25 124.1 545.31 HUMAN 1 2.0864 -0.4062 AEMEEMNTSEEEESP-p Q8WWL2;T422-p AEMEEMNTSEEEESP 0.599561298261351 0.0596176218583099 0.0726666666666667 0.255333333333333 4.10322700814825 16.3154608624449 0.0726666666666666 0.255333333333333 0.388756173894845 0.0233589820938909 0.936810805835081 3.12673527662885 Q8WWL2 SPIRE2 Q8WWL2.T422.p_SPIRE2 Q8WWL2_T422tS423s_2_2_422_423 Q8WWL2 Q8WWL2|Q8WWL2-2|Q8WWL2-3|Q8WWL2-4 Protein spire homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23635.23635.4 16.52 16.52 7.752 5 2 2 0 922.1588 3525.6799 T422t S423s TMT10 411 (K) APTLAEMEEMNtsEEEESPCGEVTLKR (D) APT(0.0)LAEMEEMNT(0.99)S(0.99)EEEES(0.0)PCGEVT(0.0)LKR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S SPIRE2 80924.6 2 8 1538.1 133.27 HUMAN 1 4.1032 16.3155 AEMKKSHSANDSEEF-p Q6ICG6-2;S329-p AEMKKSHSANDSEEF 0.192627910278709 0.550008985655836 0.241333333333333 -0.0836666666666667 13.9632345491464 3.49441353286205 0.241333333333333 -0.0836666666666667 0.0401491675507743 0.447258545079489 2.68617076537421 -0.819036046712445 Q6ICG6 KIAA0930 Q6ICG6.2.S329.p_KIAA0930 Q6ICG6-2_S329s _1_1_329_329 Q6ICG6-2 Q6ICG6-2|Q6ICG6-3 Isoform 2 of Uncharacterized protein KIAA0930 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12439.12439.4 13.24 13.24 1.675 4 1 1 0 918.4311 3590.726 S329s TMT10 326 (K) KSHsANDSEEFFREDDGGADLHNATNLR (S) KS(0.0)HS(0.99)ANDS(0.0)EEFFREDDGGADLHNAT(0.0)NLR K:TMT10,s:Phosphorylated S KIAA0930 46582.9 3 3 1552.1 132.36 HUMAN 1 13.9632 -3.4944 AEMKNDKSEEEQSSS-p G3V4C1;S219-p AEMKNDKSEEEQSSS 0.706604154820368 0.00566265309003686 -0.114 0.690666666666667 2.83344210958897 32.560938138926 -0.114 0.690666666666667 0.52078178885259 0.000554505918717247 -0.686374603976306 7.23797240054398 G3V4C1 NotFound G3V4C1.S219.p_NotFound G3V4C1_S219s _1_1_219_219 G3V4C1 G3V2Q1|G3V4C1 Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7757.7757.5 14.6 12.3 3.878 5 1 1 0 628.3244 3057.618 S219s TMT10 211 (K) QAEMKNDKsEEEQSSSSVK (K) Q(0.0)AEM(0.0)KN(0.0)DKS(0.99)EEEQS(0.0)S(0.0)S(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S HNRNPC 32294.9 3 3 261.3 397.39 HUMAN 1 -2.8334 32.5609 AEMKVLESPENKSGT-p Q8N3D4;S964-p AEMKVLESPENKSGT 0.198398862430063 0.00491676224776641 -0.195666666666667 -0.688 13.6758159523478 33.6787246181905 -0.195666666666667 -0.688 0.0428961588376585 0.000428674389657107 -2.63358818095844 -7.62024101005924 Q8N3D4 EHBP1L1 Q8N3D4.S964.p_EHBP1L1 Q8N3D4_S964s _1_1_964_964 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12651.12651.2 11.12 5.59 99 1 1 1 0 727.389 1373.8041 S964s TMT10 961 (K) VLEsPENK (S) VLES(1.0)PENK K:TMT10,s:Phosphorylated S EHBP1L1 162650.3 4 7 593.1 264.13 HUMAN 1 -13.6758 -33.6787 AENARSASFSQGTRA-p Q9UQC2;S210-p AENARSASFSQGTRA 0.00861592953244037 0.00101854180503129 -1.66066666666667 -1.83933333333333 53.7410487722563 51.9965710707259 -1.66066666666667 -1.83933333333333 4.22566556879405e-06 6.31455707345129e-06 -18.5045144165366 -17.1060593422262 Q9UQC2 GAB2 Q9UQC2.S210.p_GAB2 Q9UQC2_S210s _1_1_210_210 Q9UQC2 Q9UQC2|Q9UQC2-2 GRB2-associated-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5914.5914.2 11.65 4.39 1.607 4 1 1 0 625.2921 1169.6112 S210s TMT10 208 (R) SAsFSQGTR (A) S(0.0)AS(0.99)FS(0.0)QGT(0.0)R s:Phosphorylated S GAB2 74969.7 1 1 698.1 241.06 HUMAN 1 -53.741 -51.9966 AENGLLMTPCYTANF-p Q15418;T573-p AENGLLMTPCYTANF 0.0627490972489925 0.00665468390449632 -0.426 -0.496666666666667 26.1237082230806 31.275332104217 -0.426 -0.496666666666667 0.00244134512016511 0.000745532859082946 -5.33412403790125 -6.81831134543733 Q15418 RPS6KA1 Q15418.T573.p_RPS6KA1 Q15418_T573t _1_1_573_573 Q15418 Q15418-2|P51812|E9PGT3|Q15418-4|Q15418-3 Ribosomal protein S6 kinase alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29103.29103.4 21.15 21.15 6.661 3 1 1 0 783.9069 3052.6364 T573t TMT10 566 (R) AENGLLMtPCYTANFVAPEVLKR (Q) AENGLLMT(0.99)PCY(0.0)T(0.0)ANFVAPEVLKR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T RPS6KA1 83120.8 14 5 1026.1 186.86 HUMAN 1 -26.1237 -31.2753 AENPSPRSPSSQTPN-p Q9NZJ0;S679-p AENPSPRSPSSQTPN 0.514736070965497 0.000952253650599092 0.110333333333333 -2.05633333333333 5.32484744960495 54.9037442270266 0.110333333333333 -2.05633333333333 0.293437257499472 3.23314794077703e-06 1.16326891714565 -19.3876999420203 Q9NZJ0 DTL Q9NZJ0.S679.p_DTL Q9NZJ0_S679s _1_1_679_679 Q9NZJ0 Q9NZJ0|F5GZ90 Denticleless protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3331.3331.5 16.12 16.12 2.708 6 1 1 0 527.6769 2554.385 S679s TMT10 670 (K) RKAENPSPRsPSSQTPNSR (R) RKAENPS(0.0)PRS(0.99)PS(0.0)S(0.0)QT(0.0)PNS(0.0)R K:TMT10,s:Phosphorylated S DTL 80892.7 5 14 461.1 305.23 HUMAN 1 5.3248 -54.9037 AENSVVISNGDINLS-p P38432;S98-p AENSVVISNGDINLS 0.710601026019343 0.0173454724453883 -0.0536666666666667 -0.336 2.79036964326295 24.2908037402936 -0.0536666666666667 -0.336 0.525972497121841 0.0037232279482753 -0.677502609481787 -4.86052925889299 P38432 COIL P38432.S98.p_COIL P38432_S98s_1_1_98_98 P38432 P38432 Coilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22711.22711.4 17.82 17.82 6.013 3 1 1 0 656.858 2543.4557 S98s N99n TMT10 89 (R) GVAENSVVIsnGDINLSLRK (A) GVAEN(0.0)S(0.0)VVIS(0.99)N(0.99)GDIN(0.0)LS(0.0)LRK K:TMT10,s:Phosphorylated S,n:Deamidated COIL 63291.8 5 2 395.1 330.42 HUMAN 1 -2.7904 -24.2908 AENTASQSPRTRGSR-p Q9UER7;S178-p AENTASQSPRTRGSR 0.21671898036419 0.0315588198007917 0.28 -0.287333333333333 12.7944794850545 20.2773429367859 0.28 -0.287333333333333 0.0525474991087772 0.009381357935705 2.47409834280523 -3.93497809759298 Q9UER7 DAXX Q9UER7.S178.p_DAXX Q9UER7_S178s _1_1_178_178 Q9UER7 Q9UER7|Q9UER7-2|Q9UER7-4|Q9UER7-5|Q9UER7-3 Death domain-associated protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18482.18482.5 22.49 22.49 1.116 10 1 1 0 911.0575 4471.2854 S178s TMT10 142 (K) KLNLAPAATTSNEPSGNNPPTHLSLDPTNAENTASQsPR (T) KLNLAPAAT(0.0)T(0.0)S(0.0)NEPS(0.0)GNNPPT(0.0)HLS(0.0)LDPT(0.0)NAENT(0.0)AS(0.0)QS(0.99)PR K:TMT10,s:Phosphorylated S DAXX 82112.9 3 3 315.1 368.97 HUMAN 1 12.7945 -20.2773 AENTGPNSPDHQQLT-p Q8N4T4;S174-p AENTGPNSPDHQQLT 0.732621990036657 0.521486312531378 0.0496666666666667 -0.0783333333333333 2.56215043321672 3.79965418583595 0.0496666666666667 -0.0783333333333333 0.554351154939798 0.416902578706054 0.629985232540786 -0.878490840154183 Q8N4T4 ARHGEF39 Q8N4T4.S174.p_ARHGEF39 Q8N4T4_S174s _1_1_174_174 Q8N4T4 Q8N4T4-4|Q8N4T4-2 Rho guanine nucleotide exchange factor 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32284.32284.4 26.4 20.14 1.666 4 1 1 0 836.9183 3264.681 S174s TMT10 156 (R) LQQYENLVVALAENTGPNsPDHQQLTR (A) LQQY(0.0)ENLVVALAENT(0.0)GPNS(0.99)PDHQQLT(0.0)R s:Phosphorylated S ARHGEF39 38750.8 2 1 4805.1 26.4 HUMAN 1 2.5622 -3.7997 AEPAAEASDEAERRA-p Q24JP5-2;S530-p AEPAAEASDEAERRA 0.962849921197336 0.64093649808822 -0.00766666666666668 0.048 0.317939972277066 2.63142442643195 -0.00766666666666669 0.048 0.92940713620972 0.545578889337736 -0.0927925134104682 0.644417666521911 Q24JP5 TMEM132A Q24JP5.2.S530.p_TMEM132A Q24JP5-2_S530s _1_1_530_530 Q24JP5-2 Q24JP5-2|Q24JP5-4 Isoform 2 of Transmembrane protein 132A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12571.12571.3 19.85 19.85 99 1 1 1 0 787.0264 2279.0989 S530s TMT10 515 (R) VPGPAEGPAEPAAEAsDEAER (R) VPGPAEGPAEPAAEAS(1.0)DEAER s:Phosphorylated S TMEM132A 111164.8 8 1 1425.1 143.96 HUMAN 1 -0.3179 2.6314 AEPELMGTPDGTCYP-p P27708;T1884-p AEPELMGTPDGTCYP 0.810029994538021 0.330337388073024 0.0363333333333333 -0.104333333333333 1.7582107589078 6.36934250096929 0.0363333333333333 -0.104333333333333 0.667081542189663 0.230709644456344 0.45456437576041 -1.34976267649095 P27708 CAD P27708.T1884.p_CAD P27708_T1884t _1_1_1884_1884 P27708 P27708|F8VPD4 CAD protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20734.20734.3 26.48 26.48 3.634 3 1 1 0 1016.1791 2966.552 T1884t TMT10 1875 (R) KVAEPELMGtPDGTCYPPPPVPR (Q) KVAEPELMGT(0.99)PDGT(0.0)CY(0.0)PPPPVPR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T CAD 245318.5 2 5 628.1 257.21 HUMAN 1 1.7582 -6.3693 AEPGDGDSDTTKKKK-p O60832;S494-p AEPGDGDSDTTKKKK 0.253566244688488 0.395763845945807 0.201666666666667 -0.119 11.3492558399377 5.35154592373249 0.201666666666667 -0.119 0.0732950112785274 0.2916388705382 2.21741300421522 -1.16785797700469 O60832 DKC1 O60832.S494.p_DKC1 O60832_S494s _1_1_494_494 O60832 O60832 H/ACA ribonucleoprotein complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10248.10248.3 22.16 17.99 2.333 4 1 1 0 891.7789 2593.356 S494s TMT10 479 (K) AKAGLESGAEPGDGDsDTTK (K) AKAGLES(0.0)GAEPGDGDS(0.99)DT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S DKC1 58129.5 24 6 363.1 342.61 HUMAN 1 11.3493 -5.3515 AEPGEKGSARKAGPA-p Q9H910-3;S172-p AEPGEKGSARKAGPA 0.23797684518109 0.00859435845280782 -0.200333333333333 -0.751666666666667 11.9326690951499 29.3078081750154 -0.200333333333333 -0.751666666666667 0.064081562187538 0.00117278710586195 -2.32039763952868 -6.21470339324429 Q9H910 HN1L Q9H910.3.S172.p_HN1L Q9H910-3_S172s _1_1_172_172 Q9H910-3 Q9H910-3|A6NGP5|Q9H910-2 Isoform 3 of Jupiter microtubule associated homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8314.8314.4 13.73 10.18 5.995 2 1 1 0 581.3259 2242.3122 S172s TMT10 160 (R) SIPAGAEPGEKGsARK (A) S(0.0)IPAGAEPGEKGS(0.99)ARK K:TMT10,s:Phosphorylated S JPT2 23082.3 4 10 1318.1 154.67 HUMAN 1 -11.9327 -29.3078 AEPIVVSSDEEGPVE-p Q9BQF6-5;S378-p AEPIVVSSDEEGPVE 0.207735478203539 0.0646181984401455 0.197 0.211333333333333 13.1684392926994 15.8323421640359 0.197 0.211333333333333 0.048212102446722 0.0261075298722594 2.54146355102393 3.03394801019016 Q9BQF6 SENP7 Q9BQF6.5.S378.p_SENP7 Q9BQF6-5_S377sS378s_2_2_377_378 Q9BQF6-5 Q9BQF6|Q9BQF6-2|J3QT09|Q9BQF6-5|Q9BQF6-4 Isoform 5 of Sentrin-specific protease 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18971.18971.3 20.46 21.08 3.808 4 2 2 0 1192.8912 3416.7334 S377s S378s TMT10 360 (R) GHNEGNQSLISAEPIVVssDEEGPVEHK (S) GHNEGNQS(0.0)LIS(0.0)AEPIVVS(0.99)S(0.99)DEEGPVEHK K:TMT10,s:Phosphorylated S SENP7 113127.1 3 10 1683.1 121.31 HUMAN 1 13.1684 15.8323 AEPMQWASLELPAAK-p Q9UHD1;S314-p AEPMQWASLELPAAK 0.425033318045053 0.245496727327693 -0.12 0.125333333333333 6.84762780001948 8.03874865971561 -0.12 0.125333333333333 0.206650861433634 0.157081534090611 -1.43431401225836 1.64135891682865 Q9UHD1 CHORDC1 Q9UHD1.S314.p_CHORDC1 Q9UHD1_S314s _1_1_314_314 Q9UHD1 Q9UHD1|Q9UHD1-2|E9PHZ2 Cysteine and histidine-rich domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28772.28772.3 16.3 12.84 99 1 1 1 0 727.3799 2100.1564 S314s TMT10 307 (K) AEPMQWAsLELPAAK (K) AEPMQWAS(1.0)LELPAAK K:TMT10,s:Phosphorylated S CHORDC1 38287.9 2 5 1501.1 135.88 HUMAN 1 -6.8476 8.0387 AEPRPPQSPASTASF-p Q9P206-3;S917-p AEPRPPQSPASTASF 0.238258855751129 0.016004263725335 -0.218333333333333 -0.367333333333333 11.9183088317022 24.8058074532184 -0.218333333333333 -0.367333333333333 0.0642938032434283 0.00330688623730859 -2.317853197216 -4.98859786813226 Q9P206 KIAA1522 Q9P206.3.S917.p_KIAA1522 Q9P206-3_S917s_1_1_917_917 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.26929.26929.4 21.14 19.57 1.315 9 1 1 0 1121.0553 4400.2233 N905n S917s TMT10 890 (K) ACSLAASEGLSSAQPnGPPEAEPRPPQsPASTASFIFSK (G) ACS(0.0)LAAS(0.0)EGLS(0.0)S(0.0)AQPN(1.0)GPPEAEPRPPQS(0.99)PAS(0.0)T(0.0)AS(0.0)FIFS(0.0)K C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S KIAA1522 108782.6 6 34 62.1 704.36 HUMAN 1 -11.9183 -24.8058 AEPVRDVSWDEKGMT-p Q7Z2K8;S914-p AEPVRDVSWDEKGMT 0.128792393298587 0.027581120804571 -0.266333333333333 -0.356666666666667 18.4390074296924 21.1456785465062 -0.266333333333333 -0.356666666666667 0.0143251526001632 0.00768125433535265 -3.55166322092476 -4.12510859924065 Q7Z2K8 GPRIN1 Q7Z2K8.S914.p_GPRIN1 Q7Z2K8_S914s _1_1_914_914 Q7Z2K8 Q7Z2K8 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21116.21129.4 15.58 15.58 12.168 2 1 1 0 863.9553 3372.8316 S914s TMT10 891 (R) VRPGSALAAAVAPPEPAEPVRDVsWDEK (G) VRPGS(0.0)ALAAAVAPPEPAEPVRDVS(0.99)WDEK K:TMT10,s:Phosphorylated S GPRIN1 103196.3 2 26 292.1 381.4 HUMAN 1 -18.439 -21.1457 AEQGGDLSPAANRSQ-p O94804;S438-p AEQGGDLSPAANRSQ 0.893317056675265 0.876754986878946 -0.0226666666666667 0.0153333333333333 0.957127242523711 0.802778966192406 -0.0226666666666667 0.0153333333333333 0.802208530297474 0.831231711836425 -0.263089401399886 0.223627194092031 O94804 STK10 O94804.S438.p_STK10 O94804_S438s _1_1_438_438 O94804 O94804 Serine/threonine-protein kinase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8305.8305.2 17.4 17.4 99 1 1 1 0 911.4377 1741.903 S438s TMT10 429 (K) QVAEQGGDLsPAANR (S) QVAEQGGDLS(1.0)PAANR s:Phosphorylated S STK10 112818 6 6 728.1 236.53 HUMAN 1 -0.9571 0.8028 AEQSDKVSLFQNKKN-p A0A0U1RR07;S901-p AEQSDKVSLFQNKKN 0.280205481812668 0.0883182235445611 -0.259666666666667 -0.318666666666667 10.4423579530133 13.9491444552192 -0.259666666666667 -0.318666666666667 0.0903158980576284 0.0402796375972719 -2.05867902007899 -2.68198428248542 A0A0U1RR07 NotFound A0A0U1RR07.S901.p_NotFound A0A0U1RR07_S901s_1_1_901_901 A0A0U1RR07 A0A0U1RR07 Synaptotagmin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18247.18247.3 8.72 8.72 99 1 1 1 0 578.0052 1651.051 S901s N905n TMT10 900 (K) VsLFQnKK (N) VS(1.0)LFQN(1.0)KK K:TMT10,s:Phosphorylated S,n:Deamidated SYTL2 248167.3 1 3 1920.1 107.01 HUMAN 1 -10.4424 -13.9491 AERASTATAEETDID-p O75052;T212-p AERASTATAEETDID 0.907727341622754 0.00714231278100688 -0.021 0.49 0.825887367451838 30.7373520101203 -0.021 0.49 0.826820552102284 0.000843849114481516 -0.229615182384578 6.6487583024865 O75052 NOS1AP O75052.T212.p_NOS1AP O75052_T212t _1_1_212_212 O75052 O75052|O75052-3|E9PSG0 Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.32065.32065.3 20.68 17.39 1.104 5 1 1 0 1085.8553 3175.5844 T212t TMT10 208 (R) ASTAtAEETDIDAVEVPLPGNDVLEFSR (G) AS(0.0)T(0.0)AT(0.99)AEET(0.0)DIDAVEVPLPGNDVLEFS(0.0)R t:Phosphorylated T NOS1AP 56491.1 1 2 1378.1 148.59 HUMAN 1 -0.8259 30.7374 AERDMLPSPEQTLSP-p Q53SF7;S987-p AERDMLPSPEQTLSP 0.603447470538851 0.441016680456103 -0.076 -0.0836666666666666 4.05053733506722 4.73473758432456 -0.076 -0.0836666666666666 0.393501386102461 0.336144679452059 -0.926777608970369 -1.05501152367885 Q53SF7 COBLL1 Q53SF7.S987.p_COBLL1 Q53SF7_S987s _1_1_987_987 Q53SF7 A0A0D9SG04|Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22132.22132.4 19.5 19.5 2.279 5 1 1 0 870.9648 3400.8601 S987s TMT10 974 (K) ELTNKEAERDMLPsPEQTLSPLSK (M) ELT(0.0)NKEAERDMLPS(0.99)PEQT(0.0)LS(0.0)PLS(0.0)K K:TMT10,s:Phosphorylated S COBLL1 132526.1 9 19 163.1 494.83 HUMAN 1 -4.0505 -4.7347 AERFFTSSTSLTLKH-p Q99567;S168-p AERFFTSSTSLTLKH 0.715746720090735 0.806287032549235 -0.0583333333333333 0.0273333333333334 2.74027528241834 1.30857124821724 -0.0583333333333333 0.0273333333333334 0.53207453205813 0.739848632097801 -0.667146859414792 0.349548469222687 Q99567 NUP88 Q99567.S168.p_NUP88 Q99567_S168s _1_1_168_168 Q99567 Q99567 Nuclear pore complex protein Nup88 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28089.28089.2 13.03 7.02 1.104 6 1 1 0 885.4783 1689.9827 S168s TMT10 164 (R) FFTSsTSLTLK (H) FFT(0.0)S(0.0)S(0.99)T(0.0)S(0.0)LT(0.0)LK K:TMT10,s:Phosphorylated S NUP88 84681.5 2 3 1211.1 166.39 HUMAN 1 -2.7403 1.3086 AERGLGPSPAGDGPS-p Q92934;S25-p AERGLGPSPAGDGPS 0.890459560272579 0.956808365155927 0.0243333333333333 -0.00566666666666663 0.984343639015931 0.274774546223331 0.0243333333333333 -0.00566666666666664 0.797196964017332 0.938690765332965 0.269946570238697 -0.0805483426553551 Q92934 BAD Q92934.S25.p_BAD Q92934_S25s _1_1_25_25 Q92934 Q92934|A8MXU7|F5GYS3 Bcl2-associated agonist of cell death HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11223.11223.2 18.17 18.17 5.672 3 1 1 0 939.972 1798.9699 S25s TMT10 21 (R) GLGPsPAGDGPSGSGK (H) GLGPS(0.99)PAGDGPS(0.0)GS(0.0)GK K:TMT10,s:Phosphorylated S BAD 18391.6 6 1 1955.1 105.21 HUMAN 1 0.9843 -0.2748 AERGSGGSSGDELRE-p Q7Z4V5-4;S369-p AERGSGGSSGDELRE 0.886247690131767 0.00985022343060253 0.0443333333333333 1.034 1.02313968457981 28.235226007086 0.0443333333333333 1.034 0.790107222081937 0.0015013342742034 0.279672744198961 5.9040049285595 Q7Z4V5 HDGFRP2 Q7Z4V5.4.S369.p_HDGFRP2 Q7Z4V5-4_S369sS370s_2_2_369_370 Q7Z4V5-4 Q7Z4V5-3|Q7Z4V5-4 Isoform 4 of Hepatoma-derived growth factor-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7969.7969.5 7.33 7.33 1.126 3 2 2 0 668.1019 3176.5456 S369s S370s TMT10 357 (R) ADRGEAERGSGGssGDELREDDEPVK (K) ADRGEAERGS(0.0)GGS(0.99)S(0.99)GDELREDDEPVK K:TMT10,s:Phosphorylated S HDGFL2 74899.1 7 16 712.1 238.42 HUMAN 1 1.0231 28.2352 AERHGQVYLRKLLDD-p Q9NS23-5;Y259-p AERHGQVYLRKLLDD 0.545642581004852 0.00259997565261951 -0.168666666666667 -0.918666666666667 4.85579491533675 39.3912273377243 -0.168666666666667 -0.918666666666667 0.32690420611301 0.000115047521300287 -1.0775643049912 -9.86088435765675 Q9NS23 RASSF1 Q9NS23.5.Y259.p_RASSF1 Q9NS23-5_Y259y _1_1_259_259 Q9NS23-5 Q9NS23|Q9NS23-5|Q9NS23-2|Q9NS23-4|Q9NS23-3 Isoform E of Ras association domain-containing protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8280.8315.3 8.7 2.14 99 1 1 1 0 513.6251 1458.8945 Y259y TMT10 255 (R) HGQVyLRK (L) HGQVY(1.0)LRK K:TMT10,y:Phosphorylated Y RASSF1 39949.1 2 1 217.1 16.49 HUMAN 1 -4.8558 -39.3912 AERKKRLSIIGPTSR-p Q9Y2U5;S153-p AERKKRLSIIGPTSR 0.660154229134287 0.843126306416546 0.114666666666667 -0.0253333333333333 3.37891501797423 1.04101747193657 0.114666666666667 -0.0253333333333333 0.45931274692873 0.786861420968691 0.796377270012394 -0.284107675964757 Q9Y2U5 MAP3K2 Q9Y2U5.S153.p_MAP3K2 Q9Y2U5_S153s _1_1_153_153 Q9Y2U5 Q9Y2U5 Mitogen-activated protein kinase kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13523.13523.3 10.07 10.07 10.068 3 1 1 0 470.2678 1328.8212 S153s TMT10 151 (K) RLsIIGPTSR (D) RLS(0.99)IIGPT(0.0)S(0.0)R s:Phosphorylated S MAP3K2 70081.9 2 10 1082.1 179.91 HUMAN 1 3.3789 -1.041 AERNQRGSFEAPRYE-p Q96IF1;S79-p AERNQRGSFEAPRYE 0.803501336800957 0.59476581918504 0.0446666666666667 0.0516666666666667 1.83050705652669 3.05511729488888 0.0446666666666667 0.0516666666666667 0.656068663137966 0.494866745306359 0.470930619025732 0.731481424916067 Q96IF1 AJUBA Q96IF1.S79.p_AJUBA Q96IF1_S79s _1_1_79_79 Q96IF1 Q96IF1 LIM domain-containing protein ajuba HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5117.5117.3 9.1 9.1 99 1 1 1 0 490.9065 1390.7389 S79s TMT10 75 (R) NQRGsFEAPR (Y) NQRGS(1.0)FEAPR s:Phosphorylated S AJUBA 58758.7 2 2 1286.1 158.19 HUMAN 1 1.8305 3.0551 AERPGPPTPAAAHSI-p Q7Z434;T121-p AERPGPPTPAAAHSI 0.150059860725025 0.251509983300078 0.254666666666667 0.171 16.6095395232887 7.8940069810533 0.254666666666667 0.171 0.0218296135608641 0.162404964870948 3.18612094569682 1.61626297261732 Q7Z434 MAVS Q7Z434.T121.p_MAVS Q7Z434_T121t_1_1_121_121 Q7Z434 Q7Z434 Mitochondrial antiviral-signaling protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17852.17852.5 7.01 5.17 1.738 7 1 1 0 832.4114 4077.045 T121t N131n TMT10 99 (R) TSDRPPDPLEPPSLPAERPGPPtPAAAHSIPYnSCR (E) T(0.0)S(0.0)DRPPDPLEPPS(0.0)LPAERPGPPT(0.99)PAAAHS(0.0)IPY(0.0)N(1.0)S(0.0)CR C:Carbamidomethylation,t:Phosphorylated T,n:Deamidated MAVS 57097.6 1 1 1410.1 145.44 HUMAN 1 16.6095 7.894 AERSCTPSPDQISHR-p C9J6P4;S275-p AERSCTPSPDQISHR 0.342075757494071 0.156254140733103 0.138 0.152666666666667 8.65742305850026 10.6018121878585 0.138 0.152666666666667 0.136225275268557 0.0870600237333798 1.74906183602123 2.08558658778007 C9J6P4 ZC3HAV1 C9J6P4.S275.p_ZC3HAV1 C9J6P4_S275s _1_1_275_275 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2|Q7Z2W4-3 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6504.6504.3 8.98 8.98 1.985 4 1 1 0 565.2583 1613.7903 S275s TMT10 271 (R) SCTPsPDQISHR (A) S(0.0)CT(0.0)PS(0.99)PDQIS(0.0)HR C:Carbamidomethylation,s:Phosphorylated S ZC3HAV1 115909.2 2 4 361.1 343.37 HUMAN 1 8.6574 10.6018 AERSLMSSPEDLTKD-p P46821;S832-p AERSLMSSPEDLTKD 0.223866185094493 0.391328025586145 0.185 -0.131 12.4886120602546 5.41770030794438 0.185 -0.131 0.0563817814717049 0.287230113082643 2.41931281913337 -1.17982730981962 P46821 MAP1B P46821.S832.p_MAP1B P46821_S831sS832s_2_2_831_832 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.36325.36325.4 11.67 11.67 3.367 5 2 2 0 979.994 3757.0275 S831s S832s TMT10 828 (R) SLMssPEDLTKDFEELKAEEVDVTK (D) S(0.0)LMS(0.99)S(0.99)PEDLT(0.0)KDFEELKAEEVDVT(0.0)K K:TMT10,s:Phosphorylated S MAP1B 271827.6 2 26 210.1 442.48 HUMAN 1 12.4886 -5.4177 AERVLMKSPSPALHP-p Q9H6S0;S1221-p AERVLMKSPSPALHP 0.167300432977981 0.0172353234812151 -0.276666666666667 -0.372666666666667 15.5256477950647 24.3318418623124 -0.276666666666667 -0.372666666666667 0.0280178767493421 0.00368821146699439 -2.97763054978574 -4.87065063424285 Q9H6S0 YTHDC2 Q9H6S0.S1221.p_YTHDC2 Q9H6S0_S1221sS1223s_2_2_1221_1223 Q9H6S0 Q9H6S0 Probable ATP-dependent RNA helicase YTHDC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18978.18978.4 13.58 9.01 99 2 2 2 0 620.09 2317.4033 S1221s S1223s TMT10 1217 (R) VLMKsPsPALHPPQK (Y) VLMKS(1.0)PS(1.0)PALHPPQK K:TMT10,s:Phosphorylated S YTHDC2 161671.9 2 19 668.1 249.65 HUMAN 1 -15.5256 -24.3318 AESANSSSPQSSAGG-p J3QS41;S1884-p AESANSSSPQSSAGG 0.239309494250104 0.0804123294976911 -0.195333333333333 -0.206333333333333 11.8704984063205 14.5220176153385 -0.195333333333333 -0.206333333333333 0.0650055084247952 0.0353019128499373 -2.3093854891863 -2.78752828267719 J3QS41 HELZ J3QS41.S1884.p_HELZ J3QS41_S1884s _1_1_1884_1884 J3QS41 J3QS41|P42694 Probable helicase with zinc finger domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17392.17392.4 21.12 21.12 2.618 9 1 1 0 823.6609 3211.6418 S1884s TMT10 1875 (K) QIAESANSSsPQSSAGGKPAMSYASALR (A) Q(0.0)IAES(0.0)AN(0.0)S(0.0)S(0.0)S(0.99)PQS(0.0)S(0.0)AGGKPAM(0.0)S(0.0)Y(0.0)AS(0.0)ALR K:TMT10,s:Phosphorylated S HELZ 220821.8 2 14 466.1 303.39 HUMAN 1 -11.8705 -14.522 AESESLDSFTADSDS-p Q96C24;S204-p AESESLDSFTADSDS 0.764738958266359 0.0128787446023325 0.0516666666666667 0.369 2.23617053133786 26.3227308330818 0.0516666666666667 0.369 0.597561965212493 0.00233199125076985 0.56049095752701 5.37959297047031 Q96C24 SYTL4 Q96C24.S204.p_SYTL4 Q96C24_S201sS204s_2_2_201_204 Q96C24 Q96C24|Q96C24-2 Synaptotagmin-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20316.20316.3 17.88 17.88 2.458 9 2 2 0 898.7028 2534.1579 S201s S204s TMT10 193 (K) SALEAESEsLDsFTADSDSTSR (R) S(0.0)ALEAES(0.0)ES(0.99)LDS(0.99)FT(0.0)ADS(0.0)DS(0.0)T(0.0)S(0.0)R s:Phosphorylated S SYTL4 76649.8 3 10 1078.1 180.34 HUMAN 1 2.2362 26.3227 AESLLLDSPAVAKSG-p Q9H4L5-2;S379-p AESLLLDSPAVAKSG 0.69315965240548 0.176512225020051 0.053 0.144666666666667 2.98684170156656 9.90633777955392 0.053 0.144666666666667 0.5027080385226 0.102180076159179 0.717738430865351 1.96465651068004 Q9H4L5 OSBPL3 Q9H4L5.2.S379.p_OSBPL3 Q9H4L5-2_S379s _1_1_379_379 Q9H4L5-2 Q9H4L5|Q9H4L5-2|Q9H4L5-5|Q9H4L5-6 Isoform 1b of Oxysterol-binding protein-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21475.21475.4 16.29 14.1 4.949 2 1 1 0 526.2971 2022.1999 S379s TMT10 370 (R) IHAESLLLDsPAVAK (S) IHAES(0.0)LLLDS(0.99)PAVAK K:TMT10,s:Phosphorylated S OSBPL3 98654.8 8 12 683.1 244.57 HUMAN 1 2.9868 9.9063 AESTERESQDTVAEN-p P49768;S324-p AESTERESQDTVAEN 0.294929222562145 0.0787838886592226 0.166666666666667 0.199666666666667 10.0034292184599 14.6498660243649 0.166666666666667 0.199666666666667 0.0999210704926718 0.0342778360763289 1.9823062329372 2.81125539018497 P49768 PSEN1 P49768.S324.p_PSEN1 P49768_S324sT327t_2_2_324_327 P49768 P49768|P49768-2|P49768-7|E7ES96 Presenilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17629.17629.3 10.58 10.58 2.481 6 2 2 0 1280.1818 3678.5902 S324s T327t TMT10 315 (K) YNAESTEREsQDtVAENDDGGFSEEWEAQR (D) Y(0.0)NAES(0.0)T(0.0)ERES(0.99)QDT(0.99)VAENDDGGFS(0.0)EEWEAQR s:Phosphorylated S,t:Phosphorylated T PSEN1 52952.1 2 5 2595.1 77.27 HUMAN 1 10.0034 14.6499 AESWEDGSPPPQART-p A1L170-2;S292-p AESWEDGSPPPQART 0.693695248940761 0.599573782982173 0.078 0.0916666666666667 2.97975117258611 3.01099521369995 0.078 0.0916666666666667 0.503529457495116 0.499919961979645 0.716296524882673 0.722543041615084 A1L170 C1orf226 A1L170.2.S292.p_C1orf226 A1L170-2_S292s _1_1_292_292 A1L170-2 A1L170-2 Isoform 2 of Uncharacterized protein C1orf226 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.34306.34509.3 28.51 28.51 1.621 5 1 1 0 882.7721 2566.335 S292s TMT10 277 (K) LSLSPISLAESWEDGsPPPQAR (T) LS(0.0)LS(0.0)PIS(0.0)LAES(0.0)WEDGS(0.99)PPPQAR s:Phosphorylated S C1orf226 33805.4 1 8 1114.1 175.67 HUMAN 1 2.9798 3.011 AETEDDESDGEDRGG-p Q6KC79;S2672-p AETEDDESDGEDRGG 0.895159198906564 0.00362308686222021 0.0266666666666667 0.590333333333333 0.942549668712779 36.2922058669625 0.0266666666666667 0.590333333333333 0.804905756040776 0.000234843969922593 0.259404876961709 8.58230937194639 Q6KC79 NIPBL Q6KC79.S2672.p_NIPBL Q6KC79_S2672s _1_1_2672_2672 Q6KC79 Q6KC79 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4991.4991.3 20.93 17.97 3.369 6 1 1 0 983.7458 2869.2517 S2672s TMT10 2661 (K) NNTAAETEDDEsDGEDRGGGTSGSLR (R) NNT(0.0)AAET(0.0)EDDES(0.99)DGEDRGGGT(0.0)S(0.0)GS(0.0)LR s:Phosphorylated S NIPBL 318099.5 5 27 50.1 752.87 HUMAN 1 0.9425 36.2922 AETKEGDSDRDTGND-p Q92800-2;S394-p AETKEGDSDRDTGND 0.0696102868238764 0.731519976182504 -0.462333333333333 0.069 24.9554097964213 1.87131969953953 -0.462333333333333 0.069 0.00319491288143874 0.649932164115039 -5.03249230707732 0.480058004079513 Q92800 EZH1 Q92800.2.S394.p_EZH1 Q92800-2_S394s _1_1_394_394 Q92800-2 Q92800-2|A0A0A0MSY9|Q92800-3|Q92800-4|Q92800-5 Isoform 2 of Histone-lysine N-methyltransferase EZH1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6573.6573.3 20.31 13.56 3.525 7 1 1 0 884.6928 2572.0981 S394s TMT10 391 (K) EGDsDRDTGNDWASSSSEANSR (C) EGDS(0.99)DRDT(0.0)GNDWAS(0.0)S(0.0)S(0.0)S(0.0)EANS(0.0)R s:Phosphorylated S EZH1 88134.4 1 1 3087.1 61.11 HUMAN 1 -24.9554 1.8713 AETNSRVSGVDGYET-p Q14566;S271-p AETNSRVSGVDGYET 0.44764393076847 0.773072070173558 0.122666666666667 0.0313333333333334 6.43856715707564 1.54637336408097 0.122666666666667 0.0313333333333333 0.227061385895231 0.700426652784075 1.36233325064707 0.405779342633443 Q14566 MCM6 Q14566.S271.p_MCM6 Q14566_S271s _1_1_271_271 Q14566 Q14566 DNA replication licensing factor MCM6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11220.11220.3 14.26 13.7 2.176 5 1 1 0 783.703 2269.1258 S271s TMT10 264 (R) AETNSRVsGVDGYETEGIR (G) AET(0.0)NS(0.0)RVS(0.99)GVDGY(0.0)ET(0.0)EGIR s:Phosphorylated S MCM6 93857.5 1 3 1039.1 185.36 HUMAN 1 6.4386 1.5464 AETPGVPSPIAALKN-p Q8IU81;S421-p AETPGVPSPIAALKN 0.501847037267007 0.110204808911674 0.0963333333333333 0.187 5.52304256384943 12.6478015343157 0.0963333333333334 0.187 0.280346890617076 0.0543525402810041 1.19910372282314 2.44649304750305 Q8IU81 IRF2BP1 Q8IU81.S421.p_IRF2BP1 Q8IU81_S421s _1_1_421_421 Q8IU81 Q8IU81 Interferon regulatory factor 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26241.26241.4 15.45 15.45 2.129 4 1 1 0 735.891 2860.5762 S421s TMT10 404 (R) HWVAPGGPYSAETPGVPsPIAALK (N) HWVAPGGPY(0.0)S(0.0)AET(0.0)PGVPS(0.99)PIAALK K:TMT10,s:Phosphorylated S IRF2BP1 62599.7 7 7 274.1 392.67 HUMAN 1 5.523 12.6478 AETPRWGSPQQRPPI-p Q9UQC2;S368-p AETPRWGSPQQRPPI 0.0824194833394143 0.00417215414210897 -0.465666666666667 -0.662333333333333 23.1677470689218 35.0194679282126 -0.465666666666667 -0.662333333333333 0.00482197876061986 0.000314813398114077 -4.59419504308442 -8.10138309961804 Q9UQC2 GAB2 Q9UQC2.S368.p_GAB2 Q9UQC2_S368s _1_1_368_368 Q9UQC2 Q9UQC2|Q9UQC2-2 GRB2-associated-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10603.10806.3 12.11 6.38 11.444 3 1 1 0 683.3346 1968.0249 S368s TMT10 366 (R) WGsPQQRPPISENSR (S) WGS(0.99)PQQRPPIS(0.0)ENS(0.0)R s:Phosphorylated S GAB2 74969.7 2 6 698.1 241.06 HUMAN 1 -23.1677 -35.0195 AETPVATSPTATDST-p P54727;S160-p AETPVATSPTATDST 0.0519054184169482 0.521766822526834 -0.819333333333333 -0.0836666666666667 28.1127117722074 3.7966405440752 -0.819333333333333 -0.0836666666666667 0.0015442898705109 0.417191974747516 -5.8778390853701 -0.877908832960832 P54727 RAD23B P54727.S160.p_RAD23B P54727_S160s _1_1_160_160 P54727 P54727|P54727-2 UV excision repair protein RAD23 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10173.10173.3 19.82 19.82 1.181 10 1 1 0 1033.5023 3018.5268 S160s TMT10 148 (K) PAEKPAETPVATsPTATDSTSGDSSR (S) PAEKPAET(0.0)PVAT(0.0)S(0.99)PT(0.0)AT(0.0)DS(0.0)T(0.0)S(0.0)GDS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S RAD23B 43227.5 15 2 3020.1 63.09 HUMAN 1 -28.1127 -3.7966 AEVARRKSVPSETVV-p P11137;S833-p AEVARRKSVPSETVV 0.839292448057169 0.0105407926544461 0.0753333333333333 0.666 1.47225144120323 27.7303511193934 0.0753333333333334 0.666 0.71248357326957 0.0016864166760769 0.388474590732722 5.76198187525197 P11137 MAP2 P11137.S833.p_MAP2 P11137_S833s _1_1_833_833 P11137 P11137|P11137-3 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16808.16808.5 15.92 15.92 2.323 6 1 1 0 792.0346 3876.1798 S833s TMT10 831 (R) RKsVPSETVVEDSRTGLPPVTDENHVIVK (T) RKS(0.99)VPS(0.0)ET(0.0)VVEDS(0.0)RT(0.0)GLPPVT(0.0)DENHVIVK K:TMT10,s:Phosphorylated S MAP2 199979.2 3 7 117.1 560.28 HUMAN 1 1.4723 27.7304 AEVCKQDSPFSRVPR-p Q92667;S169-p AEVCKQDSPFSRVPR 0.601539136153653 0.00178284028886761 0.114666666666667 -0.814666666666667 4.07700753411294 43.3627126358247 0.114666666666667 -0.814666666666667 0.391110293892701 4.61029522121286e-05 0.931821323636867 -11.7524054213948 Q92667 AKAP1 Q92667.S169.p_AKAP1 Q92667_S169s _1_1_169_169 Q92667 Q92667|Q92667-2 A-kinase anchor protein 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9411.9411.3 15.54 7.38 2.593 3 1 1 0 683.6671 1969.0213 S169s TMT10 161 (K) SAEVCKQDsPFSR (V) S(0.0)AEVCKQDS(0.99)PFS(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AKAP1 98309.7 4 4 1004.1 189.36 HUMAN 1 4.077 -43.3627 AEVGKKQSDPHLMDK-p Q2Y0W8;S246-p AEVGKKQSDPHLMDK 0.466414944822307 0.0116884830732904 -0.181333333333333 0.388666666666667 6.11489006885189 27.0221095038961 -0.181333333333333 0.388666666666667 0.244630719761983 0.00198513044330176 -1.30500454834327 5.56713679062115 Q2Y0W8 SLC4A8 Q2Y0W8.S246.p_SLC4A8 Q2Y0W8_S246s _1_1_246_246 Q2Y0W8 Q2Y0W8|Q2Y0W8-2|Q2Y0W8-3|Q2Y0W8-5|Q2Y0W8-4|Q2Y0W8-7|Q2Y0W8-6|Q2Y0W8-8 Electroneutral sodium bicarbonate exchanger 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10047.10047.3 13.54 7.74 99 1 1 1 0 656.0198 1886.0773 S246s TMT10 244 (K) KQsDPHLMDK (H) KQS(1.0)DPHLMDK K:TMT10,s:Phosphorylated S SLC4A8 124418.9 7 1 3282.1 55.15 HUMAN 1 -6.1149 27.0221 AEVLGHKTPEPAPRR-p Q9UHD8;T142-p AEVLGHKTPEPAPRR 0.271805915294563 0.0125377840131028 0.223333333333333 -0.391333333333333 10.7197569164267 26.5300337918666 0.223333333333333 -0.391333333333333 0.084727483653245 0.00222329259144496 2.10708242300508 -5.43468939700149 Q9UHD8 SEPT9 Q9UHD8.T142.p_SEPT9 Q9UHD8_T142t _1_1_142_142 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2|Q9UHD8-7|K7ER34 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6391.6391.5 17.25 17.25 99 1 1 1 0 440.0472 2116.2391 T142t TMT10 134 (K) RAEVLGHKtPEPAPR (R) RAEVLGHKT(1.0)PEPAPR K:TMT10,t:Phosphorylated T SEPT9 65685.6 5 14 110.1 572.91 HUMAN 1 10.7198 -26.53 AEVQRRLSPPECLNA-p Q96SH1;S241-p AEVQRRLSPPECLNA 0.490737445741576 0.173029524473013 0.127 0.179333333333333 5.69268093937326 10.0166771183616 0.127 0.179333333333333 0.269607460724285 0.0996167315144063 1.22961767445529 1.98380425451285 Q96SH1 NotFound Q96SH1.S241.p_NotFound Q96SH1_S241s _1_1_241_241 Q96SH1 Q92481-2|Q92754|Q6VUC0|Q96SH1|P05549|P05549-6|P05549-5|P05549-2|C1K3N0|Q92754-2 Transcription factor AP-2 alpha (Activating enhancer binding protein 2 alpha), isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24552.24552.4 19.38 17.22 12.214 2 1 1 0 605.0823 2337.3386 S241s TMT10 239 (R) RLsPPECLNASLLGGVLRR (A) RLS(0.99)PPECLNAS(0.0)LLGGVLRR C:Carbamidomethylation,s:Phosphorylated S TFAP2A 48719.9 5 6 2051.1 100.4 HUMAN 1 5.6927 10.0167 AEVRAPCSPARGPER-p Q969J2;S44-p AEVRAPCSPARGPER 0.925978143058403 0.0617261179423207 0.0173333333333333 0.402333333333333 0.659440877246364 16.1026336150446 0.0173333333333333 0.402333333333333 0.859124120406392 0.0245322080131991 0.186126580034506 3.08572417006181 Q969J2 ZKSCAN4 Q969J2.S44.p_ZKSCAN4 Q969J2_S44s _1_1_44_44 Q969J2 Q969J2 Zinc finger protein with KRAB and SCAN domains 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.2928.2928.2 12.21 12.21 99 1 1 1 0 639.2763 1197.5793 S44s Hydrogen 41 (R) APCsPARGPER (S) APCS(1.0)PARGPER C:Carbamidomethylation,s:Phosphorylated S ZKSCAN4 62890.4 4 1 5732.1 16.74 HUMAN 1 0.6594 16.1026 AEVRKALSRQEMQEV-p P22626;S189-p AEVRKALSRQEMQEV 0.491606096259983 0.00636741490360708 -0.166333333333333 0.484333333333333 5.67678469278784 31.6160624595732 -0.166333333333333 0.484333333333333 0.270596098590507 0.000689276947584115 -1.2267641603906 6.92751950368072 P22626 HNRNPA2B1 P22626.S189.p_HNRNPA2B1 P22626_S189s _1_1_189_189 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9078.9078.3 12.26 12.26 6.972 3 1 1 0 653.3186 1877.9701 S189s TMT10 187 (K) ALsRQEMQEVQSSR (S) ALS(0.99)RQEMQEVQS(0.0)S(0.0)R s:Phosphorylated S HNRNPA2B1 37486.1 1 6 299.1 378.08 HUMAN 1 -5.6768 31.6161 AEVSCRDSQPIVLPT-p Q7Z419;S169-p AEVSCRDSQPIVLPT 0.309201686284162 0.455755276869407 -0.212333333333333 -0.108 9.53130480095121 4.55043593071896 -0.212333333333333 -0.108 0.111395980353207 0.350716668383712 -1.90038401674052 -1.0207976669162 Q7Z419 RNF144B Q7Z419.S169.p_RNF144B Q7Z419_S169s _1_1_169_169 Q7Z419 Q7Z419|Q7Z419-2 E3 ubiquitin-protein ligase RNF144B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14660.14722.5 17.71 16.42 2.178 3 1 1 0 583.2811 2832.4049 S169s TMT10 158 (K) DAWHAEVSCRDsQPIVLPTEHR (A) DAWHAEVS(0.0)CRDS(0.99)QPIVLPT(0.0)EHR C:Carbamidomethylation,s:Phosphorylated S RNF144B 35578.8 1 1 5610.1 17.71 HUMAN 1 -9.5313 -4.5504 AFCDLVWSDPEDVDT-p O00743-3;S234-p AFCDLVWSDPEDVDT 0.425033318045053 0.0405146109921076 -0.154 -0.365 6.84744473039712 18.667889822994 -0.154 -0.365 0.206659572640917 0.0135897359272707 -1.43428190026477 -3.59563500662633 O00743 PPP6C O00743.3.S234.p_PPP6C O00743-3_S234s _1_1_234_234 O00743-3 O00743-3|O00743-2 Isoform 3 of Serine/threonine-protein phosphatase 6 catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33926.33926.3 20.04 20.04 5.945 3 1 1 0 949.0961 2765.3078 S234s TMT10 226 (K) GAFCDLVWsDPEDVDTWAISPR (G) GAFCDLVWS(0.99)DPEDVDT(0.0)WAIS(0.0)PR C:Carbamidomethylation,s:Phosphorylated S PPP6C 39744.8 1 1 5368.1 20.04 HUMAN 1 -6.8474 -18.6679 AFDLFKLTPEEKNDV-p Q99549-2;T454-p AFDLFKLTPEEKNDV 0.176900619578282 0.146488715622609 -0.480333333333333 0.212 14.9148730815671 10.9855626500378 -0.480333333333333 0.212 0.0322487356180283 0.0796973232067236 -2.86250074363191 2.15261122325263 Q99549 MPHOSPH8 Q99549.2.T454.p_MPHOSPH8 Q99549-2_T454t _1_1_454_454 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27902.27902.3 14.16 11.38 99 1 1 1 0 773.7578 2239.2941 T454t TMT10 446 (R) NAFDLFKLtPEEK (N) NAFDLFKLT(1.0)PEEK K:TMT10,t:Phosphorylated T MPHOSPH8 98148.4 1 18 242.1 413.34 HUMAN 1 -14.9149 10.9856 AFEDFSRSLPELDRD-p Q9H4G0;S639-p AFEDFSRSLPELDRD 0.762604961316616 0.685455978862791 0.0876666666666666 0.0576666666666667 2.2546585514779 2.24526731798262 0.0876666666666667 0.0576666666666667 0.595023536519967 0.596311614388771 0.564487547323548 0.562389950003228 Q9H4G0 EPB41L1 Q9H4G0.S639.p_EPB41L1 Q9H4G0_S639s _1_1_639_639 Q9H4G0 Q9H4G0 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22198.22198.4 16.97 16.97 4.521 5 1 1 0 730.3704 2838.4885 S639s TMT10 639 (R) sLPELDRDKSDSDTEGLLFSR (D) S(0.99)LPELDRDKS(0.0)DS(0.0)DT(0.0)EGLLFS(0.0)R K:TMT10,s:Phosphorylated S EPB41L1 99071.6 1 16 174.1 483.37 HUMAN 1 2.2547 2.2453 AFEEDIETPPTRNIP-p Q9P2D1;T2551-p AFEEDIETPPTRNIP 0.118032159976234 0.0255648700422489 0.29 0.311 19.314833095152 21.6657297398132 0.29 0.311 0.0117089160029686 0.00681439063717193 3.73342463296633 4.24150830546049 Q9P2D1 CHD7 Q9P2D1.T2551.p_CHD7 Q9P2D1_T2551t _1_1_2551_2551 Q9P2D1 Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15686.15893.3 10 10 4.117 2 1 1 0 571.9372 1633.8271 T2551t TMT10 2544 (K) AFEEDIEtPPTR (N) AFEEDIET(0.99)PPT(0.0)R t:Phosphorylated T CHD7 337747 1 11 256.1 399.25 HUMAN 1 19.3148 21.6657 AFEERHKSWGIDCLF-p P51580;S229-p AFEERHKSWGIDCLF 0.106153151342231 0.100161371720047 -0.531 -0.181 20.5079755762069 13.2058562129409 -0.531 -0.181 0.00889615707403684 0.047798512194173 -3.98882546375407 -2.54680425727893 P51580 TPMT P51580.S229.p_TPMT P51580_S229s _1_1_229_229 P51580 P51580 Thiopurine S-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33357.33357.3 14.9 14.54 99 1 1 1 0 598.2971 1712.9082 S229s TMT10 229 (K) sWGIDCLFEK (L) S(1.0)WGIDCLFEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TPMT 28636.2 3 3 2459.1 82.41 HUMAN 1 -20.508 -13.2059 AFEQKTLTPDQWARE-p Q9H3K6;T76-p AFEQKTLTPDQWARE 0.405651195639968 0.280859330814252 0.163 -0.127666666666667 7.23535476734901 7.26725219741493 0.163 -0.127666666666667 0.189001183321435 0.18761812017048 1.50215118801443 -1.50728547108152 Q9H3K6 BOLA2 Q9H3K6.T76.p_BOLA2 Q9H3K6_T76t _1_1_76_76 Q9H3K6 A0A087WZT3|Q9H3K6 BolA-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16547.16547.2 10.39 5.92 2.265 2 1 1 0 698.845 1316.716 T76t TMT10 74 (K) TLtPDQWAR (E) T(0.0)LT(0.99)PDQWAR t:Phosphorylated T BOLA2 10287.5 1 3 4991.1 24.11 HUMAN 1 7.2354 -7.2673 AFGARRNTIDSTSSF-p Q8TDN4;T415-p AFGARRNTIDSTSSF 0.131539706649705 0.0951267385585337 -0.355666666666667 -0.314 18.1895014417803 13.5120336680379 -0.355666666666667 -0.314 0.0151722453070024 0.0445447610079746 -3.5007187190236 -2.60225947191384 Q8TDN4 CABLES1 Q8TDN4.T415.p_CABLES1 Q8TDN4_T415t _1_1_415_415 Q8TDN4 Q8TDN4|Q8TDN4-2|Q8TDN4-4 CDK5 and ABL1 enzyme substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12862.12862.3 14.23 14.23 4.686 6 1 1 0 652.3126 1874.9558 T415t TMT10 413 (R) RNtIDSTSSFSQFR (N) RNT(0.99)IDS(0.0)T(0.0)S(0.0)S(0.0)FS(0.0)QFR t:Phosphorylated T CABLES1 68282.3 2 7 1243.1 162.91 HUMAN 1 -18.1895 -13.512 AFGGGLLSPGPEAT_-p Q01201;S573-p AFGGGLLSPGPEAT_ 0.310251176950962 0.0335172976374789 0.223333333333333 -0.313666666666667 9.50106680412805 19.8811708424366 0.223333333333333 -0.313666666666667 0.112174287471992 0.0102773918595424 1.89514315324917 -3.84991940096541 Q01201 RELB Q01201.S573.p_RELB Q01201_S573s _1_1_573_573 Q01201 Q01201|D6R992 Transcription factor RelB HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26303.26303.2 11.25 11.25 2.58 2 1 1 0 891.9304 1702.8849 S573s TMT10 564 (R) EAAFGGGLLsPGPEAT (-) EAAFGGGLLS(0.99)PGPEAT(0.0) s:Phosphorylated S RELB 62875 1 1 6511.1 11.25 HUMAN 1 9.5011 -19.8812 AFHEQRRSLERARTE-p W0Z7M9;S51-p AFHEQRRSLERARTE 0.596901987159087 0.0105350868633218 -0.102 -0.469666666666667 4.13743400656109 27.7399260623626 -0.102 -0.469666666666667 0.385706181699129 0.0016827027084535 -0.943310740100001 -5.76465083523938 W0Z7M9 MKL1 W0Z7M9.S51.p_MKL1 W0Z7M9_S51s _1_1_51_51 W0Z7M9 W0Z7M9|Q969V6|A0A087WU73 MKL/myocardin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26620.26620.2 8.67 5.01 8.067 2 1 1 0 997.0009 1913.0303 S51s TMT10 41 (K) SPAAFHEQRRsLER (A) S(0.0)PAAFHEQRRS(0.99)LER s:Phosphorylated S mkl1 103399.4 1 2 1467.1 139.9 HUMAN 1 -4.1374 -27.7399 AFHPPNVSPRLLHPA-p Q9H0F5;S167-p AFHPPNVSPRLLHPA 0.94478758147709 0.0831466492818888 -0.0166666666666667 -0.247666666666667 0.484966132289176 14.3004844227044 -0.0166666666666666 -0.247666666666667 0.894341506274318 0.037149378945872 -0.1391797025738 -2.74656610023411 Q9H0F5 RNF38 Q9H0F5.S167.p_RNF38 Q9H0F5_S167s _1_1_167_167 Q9H0F5 Q9H0F5|Q9H0F5-2|Q9H0F5-4|Q9H0F5-3 E3 ubiquitin-protein ligase RNF38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11483.11483.3 10.32 10.32 99 1 1 1 0 477.5773 1350.748 S167s TMT10 160 (R) AFHPPNVsPR (L) AFHPPNVS(1.0)PR s:Phosphorylated S RNF38 58450.1 1 1 6654.1 10.32 HUMAN 1 -0.485 -14.3005 AFIKKAESEELEVQK-p A0A087X165;S1077-p AFIKKAESEELEVQK 0.59771621157384 0.560968545900284 0.109333333333333 0.0766666666666667 4.12927714429461 3.38456734179119 0.109333333333333 0.0766666666666667 0.386431290746619 0.458715342227919 0.94176176661311 0.797375727157461 A0A087X165 NotFound A0A087X165.S1077.p_NotFound A0A087X165_S1077s _1_1_1077_1077 A0A087X165 A0A087X165|Q9C0H9-5|Q9C0H9-2 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14140.14140.5 12.79 12.79 99 1 1 1 0 548.5161 2658.5848 S1077s TMT10 1074 (K) KAEsEELEVQKPQVK (L) KAES(1.0)EELEVQKPQVK K:TMT10,s:Phosphorylated S SRCIN1 130745.5 2 30 98.1 603.22 HUMAN 1 4.1293 3.3846 AFIRQNASFLYETVL-p Q8IYI6;S679-p AFIRQNASFLYETVL 0.117289050573617 0.382179244375475 -0.311666666666667 -0.092 19.3623470631613 5.54959287360256 -0.311666666666667 -0.092 0.0115815128583219 0.278638236389943 -3.74341981871241 -1.20362224796941 Q8IYI6 EXOC8 Q8IYI6.S679.p_EXOC8 Q8IYI6_S679s _1_1_679_679 Q8IYI6 Q8IYI6 Exocyst complex component 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.35013.35013.3 17.26 17.26 4.646 3 1 1 0 792.4271 2295.3001 S679s TMT10 676 (R) QNAsFLYETVLPVVEK (R) QNAS(0.99)FLY(0.0)ET(0.0)VLPVVEK K:TMT10,s:Phosphorylated S EXOC8 82482.3 1 5 1770.1 116.15 HUMAN 1 -19.3623 -5.5496 AFIVISDSDGEEPKE-p Q96RL1;S46-p AFIVISDSDGEEPKE 0.558906099125035 0.136003892157302 0.0803333333333333 0.153333333333333 4.66328480301161 11.4167417546483 0.0803333333333333 0.153333333333333 0.34172088284115 0.0721648684924716 1.0419754404716 2.22823808824862 Q96RL1 UIMC1 Q96RL1.S46.p_UIMC1 Q96RL1_S44sS46s_2_2_44_46 Q96RL1 Q96RL1|Q96RL1-2|D6RCQ3|Q96RL1-5 BRCA1-A complex subunit RAP80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25101.25101.4 19.52 15.45 99 2 2 2 0 820.8905 3120.5989 S44s S46s Hydrogen 36 (R) LEDAFIVIsDsDGEEPKEENGLQK (T) LEDAFIVIS(1.0)DS(1.0)DGEEPKEENGLQK K:TMT10-Lys-Only,s:Phosphorylated S UIMC1 80924.2 22 18 339.1 354.34 HUMAN 1 4.6633 11.4167 AFKADTPSLGEGPEK-p Q15833-3;S229-p AFKADTPSLGEGPEK 0.153159090763807 0.209461515579807 0.271666666666667 0.144 16.3894892009385 8.93089126784192 0.271666666666667 0.144 0.0229641872742495 0.127911877390097 3.14333808224308 1.79575915977416 Q15833 STXBP2 Q15833.3.S229.p_STXBP2 Q15833-3_S229s _1_1_229_229 Q15833-3 Q15833-3|Q15833-2|M0R0M7 Isoform 3 of Syntaxin-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20147.20147.4 13.41 13.41 1.139 2 1 1 0 636.0935 2461.3906 S229s TMT10 220 (K) LNAFKADTPsLGEGPEK (T) LNAFKADT(0.0)PS(0.99)LGEGPEK K:TMT10,s:Phosphorylated S STXBP2 68150.2 2 2 3836.1 42.05 HUMAN 1 16.3895 8.9309 AFLPACNSPSKEMKE-p Q86YS7-3;S260-p AFLPACNSPSKEMKE 0.141942273574901 0.0392872253413521 -0.258333333333333 -0.272666666666667 17.330845879372 18.8686877450156 -0.258333333333333 -0.272666666666667 0.0184890847029622 0.0129757128313975 -3.32808447781271 -3.63709439415646 Q86YS7 C2CD5 Q86YS7.3.S260.p_C2CD5 Q86YS7-3_S260s _1_1_260_260 Q86YS7-3 Q86YS7-5|Q86YS7-4|Q86YS7-3|Q86YS7-2 Isoform 3 of C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24715.24921.3 19 19 2.822 4 1 1 0 729.0428 2105.1465 S260s TMT10 248 (K) LSSPAAFLPACNsPSK (E) LS(0.0)S(0.0)PAAFLPACNS(0.99)PS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C2CD5 117622.7 7 3 349.1 351.16 HUMAN 1 -17.3308 -18.8687 AFNEDEDSEPEEMPP-p Q8WW12;S119-p AFNEDEDSEPEEMPP 0.42487138016849 0.289398336280437 0.108666666666667 0.105666666666667 6.85015235928246 7.10491445208838 0.108666666666667 0.105666666666667 0.206530769937096 0.194763941442791 1.43475683320784 1.47895096823796 Q8WW12 PCNP Q8WW12.S119.p_PCNP Q8WW12_S119s _1_1_119_119 Q8WW12 Q8WW12 PEST proteolytic signal-containing nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25321.25743.3 27.25 23.65 11.122 3 1 1 0 1048.8193 3064.4709 S119s TMT10 106 (K) TLSVAAAFNEDEDsEPEEMPPEAK (M) T(0.0)LS(0.0)VAAAFNEDEDS(0.99)EPEEMPPEAK K:TMT10,s:Phosphorylated S PCNP 18924.5 28 6 1455.1 140.6 HUMAN 1 6.8502 7.1049 AFNLVKDSATGLSKG-p P26368;S294-p AFNLVKDSATGLSKG 0.479639974621668 0.0305880424313445 0.0943333333333333 0.324666666666667 5.8737008522823 20.4656389601645 0.0943333333333333 0.324666666666667 0.25860083019195 0.00898330415073446 1.26203159840746 3.97577044312859 P26368 U2AF2 P26368.S294.p_U2AF2 P26368_S294s _1_1_294_294 P26368 P26368|P26368-2|K7ENG2 Splicing factor U2AF 65 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20960.20960.3 14.83 14.83 1.103 3 1 1 0 740.0869 2138.2788 S294s TMT10 287 (K) AFNLVKDsATGLSK (G) AFNLVKDS(0.99)AT(0.0)GLS(0.0)K K:TMT10,s:Phosphorylated S U2AF2 53842.4 2 5 958.1 194.87 HUMAN 1 5.8737 20.4656 AFPHLPGSAPSWPSL-p Q6UN15;S437-p AFPHLPGSAPSWPSL 0.646466566739135 0.0291671361015462 0.069 0.438666666666667 3.54738467668822 20.780010475831 0.069 0.438666666666667 0.441836441356953 0.00835601002634499 0.829558702944382 4.04441049194819 Q6UN15 FIP1L1 Q6UN15.S437.p_FIP1L1 Q6UN15_S437s _1_1_437_437 Q6UN15 Q6UN15|Q6UN15-5|Q6UN15-3 Pre-mRNA 3'-end-processing factor FIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.34007.34007.3 13.94 13.94 1.129 6 1 1 0 1127.57 3300.7458 S437s TMT10 423 (R) AFPYGNVAFPHLPGsAPSWPSLVDTSK (Q) AFPY(0.0)GNVAFPHLPGS(0.99)APS(0.0)WPS(0.0)LVDT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S FIP1L1 66639.3 1 9 404.1 326.66 HUMAN 1 3.5474 20.78 AFPSKMHSPPTIVRH-p O15021;S1422-p AFPSKMHSPPTIVRH 0.918784712427937 0.194986877700116 0.0196666666666667 0.156333333333333 0.716601683215725 9.33515389991203 0.0196666666666667 0.156333333333333 0.847890621712725 0.116542575118776 0.201197856766225 1.86569797784055 O15021 MAST4 O15021.S1422.p_MAST4 O15021_S1422s _1_1_1422_1422 O15021 O15021|J3QT34|O15021-1|E7EWQ5|O15021-3|O15021-2 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10164.10370.3 14.76 11.05 13.016 2 1 1 0 449.5663 1266.719 S1422s TMT10 1420 (K) MHsPPTIVR (H) MHS(0.99)PPT(0.0)IVR s:Phosphorylated S MAST4 286597.7 4 9 121.99 549.41 HUMAN 1 0.7166 9.3352 AFQLFDRTGDGKILY-p G8JLA2;T23-p AFQLFDRTGDGKILY 0.20055874973276 0.244810464947676 -0.22 -0.115333333333333 13.5685960817651 8.05291967867211 -0.22 -0.115333333333333 0.0439683726439778 0.15656981273297 -2.61404743935141 -1.64381488376713 G8JLA2 NotFound G8JLA2.T23.p_NotFound G8JLA2_T23t _1_1_23_23 G8JLA2 B7Z6Z4|G3V1V0|G8JLA2|J3KND3|P60660|P60660-2|F8W1R7 Myosin light polypeptide 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20657.20657.3 12.01 6.93 99 1 1 1 0 674.6724 1942.0434 T23t TMT10 15 (K) EAFQLFDRtGDGK (I) EAFQLFDRT(1.0)GDGK K:TMT10,t:Phosphorylated T MYL6 17260.1 1 1 3315.1 54.12 HUMAN 1 -13.5686 -8.0529 AFRCRSISVSEHVVR-p P49815-4;S981-p AFRCRSISVSEHVVR 0.398511503124105 0.288215918029848 -0.171333333333333 -0.160666666666667 7.37379980010002 7.12893442113294 -0.171333333333333 -0.160666666666667 0.183071196508411 0.193689714002342 -1.52629917564727 -1.48314681192222 P49815 TSC2 P49815.4.S981.p_TSC2 P49815-4_S981s _1_1_981_981 P49815-4 P49815|P49815-4 Isoform 4 of Tuberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10622.10622.3 13.79 13.79 2.487 3 1 1 0 474.5837 1341.7688 S981s TMT10 979 (R) SIsVSEHVVR (S) S(0.0)IS(0.99)VS(0.0)EHVVR s:Phosphorylated S TSC2 200147.7 1 7 214.1 435.34 HUMAN 1 -7.3738 -7.1289 AFRQVQGSEISSIDE-p Q9UK41-2;S87-p AFRQVQGSEISSIDE 0.341280214844005 0.733646832122978 0.131 -0.0366666666666667 8.67381482567292 1.85465740554744 0.131 -0.0366666666666667 0.135712083326031 0.6524305061366 1.7518994661166 -0.476314901356844 Q9UK41 VPS28 Q9UK41.2.S87.p_VPS28 Q9UK41-2_S87s _1_1_87_87 Q9UK41-2 Q9UK41-2 Isoform 2 of Vacuolar protein sorting-associated protein 28 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18263.18263.3 9.73 9.73 2.244 3 1 1 0 807.7354 2341.2222 S87s TMT10 83 (R) QVQGsEISSIDEFCRK (F) QVQGS(0.99)EIS(0.0)S(0.0)IDEFCRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VPS28 26804.4 1 1 6755.1 9.73 HUMAN 1 8.6738 -1.8547 AFRVASRSPARTPPA-p Q8N3V7-2;S535-p AFRVASRSPARTPPA 0.232360077075551 0.217338382413074 0.318 0.422 12.1875149714585 8.72340992331957 0.318 0.422 0.0604294307047322 0.134171108440448 2.36563931664576 1.75987286774978 Q8N3V7 SYNPO Q8N3V7.2.S535.p_SYNPO Q8N3V7-2_S535s _1_1_535_535 Q8N3V7-2 Q8N3V7|Q8N3V7-2|Q8N3V7-3 Isoform 2 of Synaptopodin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3127.3127.3 8.39 8.39 1.245 2 1 1 0 384.8741 1072.6425 S535s TMT10 531 (R) VASRsPAR (T) VAS(0.0)RS(0.99)PAR s:Phosphorylated S SYNPO 96794.1 1 7 947.1 196.99 HUMAN 1 12.1875 8.7234 AFSGEGQSLRKKGRK-p Q92890-1;S335-p AFSGEGQSLRKKGRK 0.0999757381136509 0.0240736941136075 0.405 -0.394 21.1654978909181 22.0610135926752 0.405 -0.394 0.00764628023688792 0.00622155064486672 4.13366405615681 -4.33129891739435 Q92890 UFD1L Q92890.1.S335.p_UFD1L Q92890-1_S335s _1_1_335_335 Q92890-1 Q92890-1 Isoform Long of Ubiquitin recognition factor in ER-associated degradation protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21874.21874.2 16.85 10.66 4.864 2 1 1 0 803.8953 1526.8165 S335s TMT10 326 (R) FVAFSGEGQsLR (K) FVAFS(0.0)GEGQS(0.99)LR s:Phosphorylated S UFD1 39066.9 5 6 833.1 215.39 HUMAN 1 21.1655 -22.061 AFSKAPGSAGHYELP-p P35250;S30-p AFSKAPGSAGHYELP 0.354660700897815 0.355316311994085 -0.136 -0.0926666666666666 8.36615695408708 5.96033726576288 -0.136 -0.0926666666666667 0.14567475776308 0.253493176433252 -1.6986271079466 -1.277192805004 P35250 RFC2 P35250.S30.p_RFC2 P35250_S30s _1_1_30_30 P35250 P35250|P35250-2|F8WC37 Replication factor C subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22865.22865.3 16.02 16.02 6.307 2 1 1 0 727.038 2099.1326 S30s TMT10 27 (K) APGsAGHYELPWVEK (Y) APGS(0.99)AGHY(0.0)ELPWVEK K:TMT10,s:Phosphorylated S RFC2 39613 3 2 3935.1 40.5 HUMAN 1 -8.3662 -5.9603 AFSRVQIYHNPTANS-p P50552;Y39-p AFSRVQIYHNPTANS 0.992676088698794 0.48645817555121 -0.00266666666666668 -0.129 0.0680617300312191 4.18125475682167 -0.00266666666666668 -0.129 0.984450371036291 0.381833936038594 -0.0204065839670164 -0.951455326063967 P50552 VASP P50552.Y39.p_VASP P50552_Y39y _1_1_39_39 P50552 P50552|K7ENL7 Vasodilator-stimulated phosphoprotein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.13935.14017.3 19.5 18.29 19.501 3 1 1 0 619.3067 1775.939 Y39y TMT10 36 (R) VQIyHNPTANSFR (V) VQIY(0.99)HNPT(0.0)ANS(0.0)FR y:Phosphorylated Y VASP 40000.2 4 1 180.1 19.5 HUMAN 1 -0.0681 -4.1813 AFSVEHTSCNEEENF-p Q8N302;S306-p AFSVEHTSCNEEENF 0.717231801732979 0.101064645361838 -0.049 -0.199666666666667 2.72301609545945 13.1516364263703 -0.049 -0.199666666666667 0.534193243143251 0.04839899652719 -0.663569492686834 -2.53701581796121 Q8N302 AGGF1 Q8N302.S306.p_AGGF1 Q8N302_S306s _1_1_306_306 Q8N302 Q8N302 Angiogenic factor with G patch and FHA domains 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17137.17137.4 16.5 16.5 1.231 3 1 1 0 785.6261 3059.517 S306s TMT10 299 (K) AFSVEHTsCNEEENFANMKK (K) AFS(0.0)VEHT(0.0)S(0.99)CNEEENFANMKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AGGF1 81375.2 5 3 1509.1 135.25 HUMAN 1 -2.723 -13.1516 AFTPKEGSPYKAPIY-p Q03112-3;S62-p AFTPKEGSPYKAPIY 0.132735384612397 0.0648250844466497 -0.374333333333333 -0.243 18.0987033716578 15.813459566003 -0.374333333333333 -0.243 0.015492791021878 0.0262212893769269 -3.48226853318565 -3.03034358211889 Q03112 MECOM Q03112.3.S62.p_MECOM Q03112-3_S62s _1_1_62_62 Q03112-3 Q03112-3|E7EQ57|Q13465 Isoform 2 of MDS1 and EVI1 complex locus protein EVI1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.35538.35538.3 17.42 17.42 7.599 3 1 1 0 1090.2347 3188.7284 S62s TMT10 60 (K) EGsPYKAPIYIPDDIPIPAEFELR (E) EGS(0.99)PY(0.0)KAPIY(0.0)IPDDIPIPAEFELR K:TMT10,s:Phosphorylated S MECOM 141074 2 2 937.1 198.37 HUMAN 1 -18.0987 -15.8135 AFTRVNLSPNRNQSA-p P35568;S1078-p AFTRVNLSPNRNQSA 0.473498904022036 0.0774945064476432 -0.109666666666667 -0.218333333333333 5.97902154628213 14.7372211660643 -0.109666666666667 -0.218333333333333 0.252404936992065 0.0335952504750551 -1.2808255279688 -2.82750499388197 P35568 IRS1 P35568.S1078.p_IRS1 P35568_S1078s _1_1_1078_1078 P35568 P35568 Insulin receptor substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8921.8921.3 12.87 12.87 3.789 2 1 1 0 622.6708 1786.0336 S1078s TMT10 1075 (R) VNLsPNRNQSAK (V) VNLS(0.99)PNRNQS(0.0)AK K:TMT10,s:Phosphorylated S IRS1 132786.8 4 17 229.1 423.14 HUMAN 1 -5.979 -14.7372 AFVAIGDYNGHVGLG-p P15880;Y133-p AFVAIGDYNGHVGLG 0.996274728193709 0.736207378874798 -0.00100000000000001 0.0406666666666667 0.0315968711225942 1.83321758078173 -0.00100000000000004 0.0406666666666667 0.992750953564195 0.655659324479615 -0.00951268709586632 0.471488577330355 P15880 RPS2 P15880.Y133.p_RPS2 P15880_Y133y _1_1_133_133 P15880 P15880|E9PM36|E9PPT0 40S ribosomal protein S2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.26769.26769.3 22.13 22.13 99 1 1 1 0 752.4064 2175.2326 Y133y TMT10 126 (K) AFVAIGDyNGHVGLGVK (C) AFVAIGDY(1.0)NGHVGLGVK K:TMT10,y:Phosphorylated Y RPS2 31609.1 2 1 151.1 22.13 HUMAN 1 -0.0316 1.8332 AFVGHRDSMDLQRFK-p Q96QT4;S1446-p AFVGHRDSMDLQRFK 0.327537851293798 0.126881772097038 0.263666666666667 0.157666666666667 9.06660253282196 11.81922997368 0.263666666666667 0.157666666666667 0.123976607096996 0.0657774453790339 1.81989286089287 2.29918458313083 Q96QT4 TRPM7 Q96QT4.S1446.p_TRPM7 Q96QT4_S1446s _1_1_1446_1446 Q96QT4 Q96QT4|H0YLN8 Transient receptor potential cation channel subfamily M member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16849.16849.4 14.9 14.9 2.933 3 1 1 0 716.3241 2782.3052 S1446s TMT10 1429 (K) ATEGDNTEFGAFVGHRDsMDLQR (F) AT(0.0)EGDNT(0.0)EFGAFVGHRDS(0.99)MDLQR s:Phosphorylated S TRPM7 214804.2 1 7 965.1 193.95 HUMAN 1 9.0666 11.8192 AFVGQKSSFLVDCSK-p O75369-8;S2563-p AFVGQKSSFLVDCSK 0.714867599749347 0.494645832825507 -0.0753333333333333 -0.137333333333333 2.74804446998066 4.08740466438853 -0.0753333333333333 -0.137333333333333 0.531123543339073 0.390175084913007 -0.668755611044444 -0.933639946969749 O75369 FLNB O75369.8.S2563.p_FLNB O75369-8_S2563s _1_1_2563_2563 O75369-8 O75369-8 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18715.18715.2 13.17 13.17 1.465 3 1 1 0 790.8929 1500.8132 S2563s TMT10 2562 (K) SsFLVDCSK (A) S(0.0)S(0.99)FLVDCS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FLNB 283797.6 3 45 67.1 680.07 HUMAN 1 -2.748 -4.0874 AFVLKTPSAAYLWVG-p P06396;S600-p AFVLKTPSAAYLWVG 0.441086498680023 0.0580265752446901 -0.127333333333333 0.285 6.54630849260814 16.4699443607087 -0.127333333333333 0.285 0.221497664200671 0.0225426809234335 -1.38133900500205 3.15664053469024 P06396 GSN P06396.S600.p_GSN P06396_S600s _1_1_600_600 P06396 P06396|A0A0A0MT01|A0A0A0MS51|P06396-3 Gelsolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25921.25921.3 19.86 19.86 1.419 5 1 1 0 792.7335 2296.2225 S600s TMT10 598 (K) TPsAAYLWVGTGASEAEK (T) T(0.0)PS(0.99)AAY(0.0)LWVGT(0.0)GAS(0.0)EAEK K:TMT10,s:Phosphorylated S GSN 86095.3 1 6 1746.1 117.91 HUMAN 1 -6.5463 16.4699 AFVRKSASPEVSEGH-p O60930;S76-p AFVRKSASPEVSEGH 0.581059694963249 0.00232985334139993 -0.121 1.067 4.33725752201394 40.4893879679885 -0.121 1.067 0.368361512733272 8.93431382196406e-05 -0.981072290520786 10.3536904419643 O60930 RNASEH1 O60930.S76.p_RNASEH1 O60930_S74sS76s_2_2_74_76 O60930 O60930 Ribonuclease H1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5036.5036.4 12.34 12.34 3.651 4 2 2 0 714.5646 2695.296 S74s S76s TMT10 74 (K) sAsPEVSEGHENQHGQESEAK (A) S(0.99)AS(0.99)PEVS(0.0)EGHENQHGQES(0.0)EAK K:TMT10,s:Phosphorylated S RNASEH1 32348.9 2 2 4554.1 29.9 HUMAN 1 -4.3373 40.4894 AFVTIKDSPPQSTKR-p Q8NDI1;S335-p AFVTIKDSPPQSTKR 0.91792561997963 0.721396674493311 -0.0163333333333333 0.04 0.726638408220688 1.95529748425681 -0.0163333333333333 0.0400000000000001 0.845933373947308 0.637485412884055 -0.203829167136088 0.498821988826155 Q8NDI1 EHBP1 Q8NDI1.S335.p_EHBP1 Q8NDI1_S335s _1_1_335_335 Q8NDI1 Q8NDI1|Q8NDI1-2|Q8NDI1-3 EH domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30521.30722.5 23.4 23.4 2.318 6 1 1 0 815.425 3993.11 S335s TMT10 313 (K) EVQTPQYLNPFDEPEAFVTIKDsPPQSTK (R) EVQT(0.0)PQY(0.0)LNPFDEPEAFVT(0.0)IKDS(0.99)PPQS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S EHBP1 140642.4 8 3 285.1 385.52 HUMAN 1 -0.7266 1.9553 AFWSRDFSDEEQSVV-p Q86T90;S21-p AFWSRDFSDEEQSVV 0.682614970420898 0.274996395971404 0.084 0.193 3.10782769359313 7.38784171715499 0.084 0.193 0.488896840499521 0.182480233624539 0.74222950284157 1.5283005424166 Q86T90 KIAA1328 Q86T90.S21.p_KIAA1328 Q86T90_S21s _1_1_21_21 Q86T90 Q86T90|K7EJ61|K7EP66 Protein hinderin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25793.25793.3 14.97 14.97 1.186 4 1 1 0 902.756 2626.2834 S21s TMT10 19 (R) DFsDEEQSVVYVPGISAEGNVR (S) DFS(0.99)DEEQS(0.0)VVY(0.0)VPGIS(0.0)AEGNVR s:Phosphorylated S KIAA1328 66227.6 1 1 4523.1 30.35 HUMAN 1 3.1078 7.3878 AFYNEDDSEEEQRQL-p Q8WWQ0;S1783-p AFYNEDDSEEEQRQL 0.648982747431647 0.376869396724338 0.066 0.0896666666666667 3.52074166309653 5.62799172381824 0.066 0.0896666666666667 0.444555342385976 0.273653386909412 0.824333743562322 1.21772488795606 Q8WWQ0 PHIP Q8WWQ0.S1783.p_PHIP Q8WWQ0_S1783s _1_1_1783_1783 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27693.28319.4 29.34 29.34 8.979 9 1 1 0 956.932 3744.735 S1783s TMT10 1775 (R) TAFYNEDDsEEEQRQLLFEDTSLTFGTSSR (G) T(0.0)AFY(0.0)NEDDS(0.99)EEEQRQLLFEDT(0.0)S(0.0)LT(0.0)FGT(0.0)S(0.0)S(0.0)R s:Phosphorylated S PHIP 208454.1 18 26 108.1 577.05 HUMAN 1 3.5207 5.628 AFYRLCSSSDTLVSE-p Q5T0W9;S803-p AFYRLCSSSDTLVSE 0.935222845456678 0.0734114957947127 -0.0126666666666667 -0.219666666666667 0.569594336188023 15.0619804407083 -0.0126666666666667 -0.219666666666667 0.877082743462992 0.03117467653118 -0.162133914906712 -2.88818953481756 Q5T0W9 FAM83B Q5T0W9.S803.p_FAM83B Q5T0W9_S802sS803s_2_2_802_803 Q5T0W9 Q5T0W9 Protein FAM83B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17694.17694.3 10.33 10.33 1.147 5 2 2 0 985.8079 2795.47 S802s S803s TMT10 800 (R) LCssSDTLVSEGEENQKPK (K) LCS(0.99)S(0.99)S(0.0)DT(0.0)LVS(0.0)EGEENQKPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM83B 115253.5 4 23 249.1 407.75 HUMAN 1 -0.5696 -15.062 AGAAAGDSDEESRAD-p O95365;S337-p AGAAAGDSDEESRAD 0.389389394272965 0.0914364449085443 0.135666666666667 -0.263666666666667 7.57598588946498 13.7393533515652 0.135666666666667 -0.263666666666667 0.174743653280304 0.0422731552745889 1.5615064989426 -2.64363661272056 O95365 ZBTB7A O95365.S337.p_ZBTB7A O95365_S337s _1_1_337_337 O95365 O95365 Zinc finger and BTB domain-containing protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18901.18901.4 20.61 20.61 4.387 4 1 1 0 851.1599 3321.6512 S337s TMT10 330 (R) AGAAAGDsDEESRADDKGVMDYYLK (Y) AGAAAGDS(0.99)DEES(0.0)RADDKGVMDY(0.0)Y(0.0)LK K:TMT10,s:Phosphorylated S ZBTB7A 62236.8 12 3 749.1 232.5 HUMAN 1 7.576 -13.7394 AGAAAPPSPPFSFQL-p P47974;S426-p AGAAAPPSPPFSFQL 0.886135088974849 0.244411945828562 -0.024 0.143333333333333 1.02450240124496 8.06335165392279 -0.024 0.143333333333333 0.789859343414207 0.156194175377394 -0.280013354035805 1.64562272743945 P47974 ZFP36L2 P47974.S426.p_ZFP36L2 P47974_S426s _1_1_426_426 P47974 P47974 mRNA decay activator protein ZFP36L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30716.30921.4 27.39 25.69 4.896 5 1 1 0 1142.334 4486.3469 S426s TMT10 394 (R) SQQQQQQQGLAPPAQPPAPPSATLPAGAAAPPsPPFSFQLPR (R) S(0.0)QQQQQQQGLAPPAQPPAPPS(0.0)AT(0.0)LPAGAAAPPS(0.99)PPFS(0.0)FQLPR s:Phosphorylated S ZFP36L2 52031.8 3 4 1672.1 122.01 HUMAN 1 -1.0245 8.0634 AGADRATSPLVSLYP-p Q96G74;S508-p AGADRATSPLVSLYP 0.703546429802328 0.296005460352786 -0.055 0.281666666666667 2.8694933406085 6.97995039361827 -0.055 0.281666666666667 0.516476619281486 0.200449492315974 -0.69377793868705 1.45710176946216 Q96G74 OTUD5 Q96G74.S508.p_OTUD5 Q96G74_S508s _1_1_508_508 Q96G74 Q96G74|Q96G74-5|Q96G74-3|Q96G74-2|A0A087WXV6|Q96G74-4 OTU domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27524.27524.2 15.31 12.46 1.169 4 1 1 0 993.5018 1906.0306 S508s TMT10 506 (R) ATsPLVSLYPALECR (A) AT(0.0)S(0.99)PLVS(0.0)LY(0.0)PALECR C:Carbamidomethylation,s:Phosphorylated S OTUD5 61138.2 5 5 946.1 197.26 HUMAN 1 -2.8695 6.98 AGAEGPGSPGVPGSP-p Q8N196;S66-p AGAEGPGSPGVPGSP 0.158414346785039 0.0317805608871883 0.489666666666667 -0.385 16.030856953405 20.2267899828955 0.489666666666667 -0.385 0.0249410254004284 0.00949119730532596 3.07411738390653 -3.92406668881194 Q8N196 SIX5 Q8N196.S66.p_SIX5 Q8N196_S66sS72s_2_2_66_72 Q8N196 Q8N196 Homeobox protein SIX5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36072.36072.5 21.37 20.24 5.829 5 2 2 0 999.6792 4834.4445 S66s S72s TMT10 34 (R) QLLQTLQAAEGEAAAAAGAGAGAAAAGAEGPGsPGVPGsPPEAASEPPTGLR (F) QLLQT(0.0)LQAAEGEAAAAAGAGAGAAAAGAEGPGS(0.99)PGVPGS(0.99)PPEAAS(0.0)EPPT(0.0)GLR s:Phosphorylated S SIX5 74902.4 1 1 5246.1 21.37 HUMAN 1 16.0309 -20.2268 AGAGEPQSPDELLPK-p Q9NS69;S15-p AGAGEPQSPDELLPK 0.401923670483933 0.0171254568278855 0.115666666666667 0.623333333333333 7.30569450374964 24.3680688442812 0.115666666666667 0.623333333333334 0.185964715322817 0.00365757394984013 1.51442442271815 4.8795973803429 Q9NS69 TOMM22 Q9NS69.S15.p_TOMM22 Q9NS69_S15s _1_1_15_15 Q9NS69 Q9NS69 Mitochondrial import receptor subunit TOM22 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28236.28443.5 29.15 27.18 15.106 3 1 1 0 1089.9113 5365.5495 S15s Acetyl 2 (M) AAAVAAAGAGEPQsPDELLPKGDAEKPEEELEEDDDEELDETLSER (L) AAAVAAAGAGEPQS(0.99)PDELLPKGDAEKPEEELEEDDDEELDET(0.0)LS(0.0)ER K:TMT10,s:Phosphorylated S TOMM22 15521.3 5 1 3000.1 63.57 HUMAN 1 7.3057 24.3681 AGAGVAHSPPSTLVW-p Q03252;S541-p AGAGVAHSPPSTLVW 0.109500745299266 0.398388513109015 -0.477666666666667 0.101 20.1150258112935 5.31377360860172 -0.477666666666667 0.101 0.00973861997386672 0.294186432086494 -3.90367974266592 1.16101316866977 Q03252 LMNB2 Q03252.S541.p_LMNB2 Q03252_S541s _1_1_541_541 Q03252 Q03252 Lamin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29721.29721.4 20.71 20.71 2.282 4 1 1 0 765.6525 2979.6279 S541s TMT10 525 (R) AGQMVTVWAAGAGVAHsPPSTLVWK (G) AGQMVT(0.0)VWAAGAGVAHS(0.99)PPS(0.0)T(0.0)LVWK K:TMT10,s:Phosphorylated S LMNB2 70061.3 2 33 440.2 312.01 HUMAN 1 -20.115 5.3138 AGAITVASHSKAVVS-p Q6ZRV2;S759-p AGAITVASHSKAVVS 0.166624001871184 0.120969767436361 0.221333333333333 -0.220666666666667 15.5628349813042 12.0938608219886 0.221333333333333 -0.220666666666667 0.0277789932262678 0.0617467235657609 2.98469299932325 -2.34781174067661 Q6ZRV2 FAM83H Q6ZRV2.S759.p_FAM83H Q6ZRV2_S759s _1_1_759_759 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9654.9654.3 21.03 19.55 2.44 3 1 1 0 655.0072 1883.0387 S759s TMT10 747 (R) DPGGGAGAITVAsHSK (A) DPGGGAGAIT(0.0)VAS(0.99)HS(0.0)K K:TMT10,s:Phosphorylated S FAM83H 127633.5 2 15 7.1 1347.23 HUMAN 1 15.5628 -12.0939 AGAKGNPSPPAAGEG-p Q92623;S15-p AGAKGNPSPPAAGEG 0.319370286133767 0.536345836524316 0.175333333333333 0.066 9.28145171209229 3.64049072550536 0.175333333333333 0.066 0.117992615691433 0.432464962447818 1.85709510958221 0.847619109410066 Q92623 TTC9 Q92623.S15.p_TTC9 Q92623_S15s _1_1_15_15 Q92623 Q92623 Tetratricopeptide repeat protein 9A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13989.14202.3 20.86 12.67 99 1 1 1 0 1028.8394 3004.5373 S15s TMT10 12 (K) GNPsPPAAGEGQRPPPPLCVPGGGGGAPAR (G) GNPS(1.0)PPAAGEGQRPPPPLCVPGGGGGAPAR C:Carbamidomethylation,s:Phosphorylated S TTC9 24720.7 7 1 3287.1 54.98 HUMAN 1 9.2815 3.6405 AGAKYTGYLCRSNTV-p Q6ZW49;Y738-p AGAKYTGYLCRSNTV 0.878892603309227 0.0169961888261017 -0.027 -0.402666666666667 1.10170129442677 24.4145361419287 -0.027 -0.402666666666667 0.775943091062412 0.00361864838463258 -0.299198109614934 -4.89108956707799 Q6ZW49 PAXIP1 Q6ZW49.Y738.p_PAXIP1 Q6ZW49_Y738y _1_1_738_738 Q6ZW49 Q6ZW49|Q6ZW49-1|Q6ZW49-2 PAX-interacting protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.12539.12664.2 13.05 4.64 1.112 3 1 1 0 621.2831 1161.5924 Y738y TMT10 735 (K) YTGyLCR (S) Y(0.0)T(0.0)GY(0.99)LCR C:Carbamidomethylation,y:Phosphorylated Y PAXIP1 122651.5 2 1 270.1 13.05 HUMAN 1 -1.1017 -24.4145 AGALRRNSLTGEEGQ-p Q9BX95;S112-p AGALRRNSLTGEEGQ 0.762019271230933 0.672490231483444 0.064 0.0693333333333334 2.25938515915325 2.35655042087363 0.064 0.0693333333333333 0.594376299901125 0.581225899015696 0.565508192641196 0.586318172595162 Q9BX95 SGPP1 Q9BX95.S112.p_SGPP1 Q9BX95_S112s _1_1_112_112 Q9BX95 Q9BX95 Sphingosine-1-phosphate phosphatase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5990.5990.2 15.58 15.58 1.314 2 1 1 0 755.8538 1430.7346 S112s Hydrogen 110 (R) RNsLTGEEGQLAR (V) RNS(0.99)LT(0.0)GEEGQLAR s:Phosphorylated S SGPP1 49734.4 6 2 3634.1 46.49 HUMAN 1 2.2594 2.3566 AGALSYVSPNTSKCP-p O95453;S163-p AGALSYVSPNTSKCP 0.197169182192768 0.00260706003105284 0.272666666666667 -0.709333333333333 13.7448109834932 39.3520088823426 0.272666666666667 -0.709333333333333 0.0422200653946397 0.000116091149578698 2.64618374931763 -9.84368711761394 O95453 PARN O95453.S163.p_PARN O95453_S163s _1_1_163_163 O95453 O95453|O95453-3|O95453-2|F5H1Z4 Poly(A)-specific ribonuclease PARN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14549.14549.3 21.9 21.9 1.999 6 1 1 0 764.0541 2210.1817 S163s TMT10 151 (R) SQANGAGALSYVsPNTSK (C) S(0.0)QANGAGALS(0.0)Y(0.0)VS(0.99)PNT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S PARN 73963.1 31 2 320.1 365.2 HUMAN 1 13.7448 -39.352 AGAPGALSPSYDGGL-p P15923-2;S379-p AGAPGALSPSYDGGL 0.168658916684596 0.00451531595404895 -0.265666666666667 -0.726333333333333 15.4341324560742 34.3981569841667 -0.265666666666667 -0.726333333333333 0.0286145390577224 0.000363232166930651 -2.96027659373338 -7.87526174960146 P15923 TCF3 P15923.2.S379.p_TCF3 P15923-2_S379s _1_1_379_379 P15923-2 X6REB3|P15923-3|P15923-2|A0A0A0MRB7 Isoform E47 of Transcription factor E2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18078.18078.3 23.41 23.41 1.307 4 1 1 0 841.0995 2441.3189 S379s TMT10 372 (R) AGAPGALsPSYDGGLHGLQSK (I) AGAPGALS(0.99)PS(0.0)Y(0.0)DGGLHGLQS(0.0)K K:TMT10,s:Phosphorylated S TCF3 67378 4 2 2913.1 66.09 HUMAN 1 -15.4341 -34.3982 AGAPVGGSPGLAKRG-p Q6ZRS2;S3148-p AGAPVGGSPGLAKRG 0.288657613845318 0.0110382865087685 0.177666666666667 -0.656666666666667 10.1765219790264 27.4142032550483 0.177666666666667 -0.656666666666667 0.0960169269421453 0.00181375939276006 2.01239573273834 -5.67438218964501 Q6ZRS2 SRCAP Q6ZRS2.S3148.p_SRCAP Q6ZRS2_S3148s _1_1_3148_3148 Q6ZRS2 Q6ZRS2|Q6ZRS2-2|Q6ZRS2-3|A0A0A0MS59 Helicase SRCAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10214.10214.2 18.19 18.19 99 1 1 1 0 695.8683 1310.763 S3148s Hydrogen 3141 (R) AGAPVGGsPGLAK (R) AGAPVGGS(1.0)PGLAK K:TMT10-Lys-Only,s:Phosphorylated S SRCAP 345203 9 21 219.1 428.72 HUMAN 1 10.1765 -27.4142 AGAQGPGSADLEDGE-p Q9C0C2;S1073-p AGAQGPGSADLEDGE 0.809310350541982 0.906543460619518 -0.034 0.0126666666666667 1.76534484091302 0.59624872142539 -0.034 0.0126666666666667 0.665986638158538 0.871716221788415 -0.456185231041974 0.16927540989699 Q9C0C2 TNKS1BP1 Q9C0C2.S1073.p_TNKS1BP1 Q9C0C2_S1073s _1_1_1073_1073 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13658.13658.2 20.46 20.46 99 1 1 1 0 1242.5793 2404.1815 S1073s TMT10 1064 (R) QQAGAQGPGsADLEDGEMGK (R) QQAGAQGPGS(1.0)ADLEDGEMGK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 6 45 4.1 2105.7 HUMAN 1 -1.7653 0.5962 AGARFVFSLVDAMNG-p P40926;S261-p AGARFVFSLVDAMNG 0.821035587591145 0.00898490162031833 -0.0533333333333333 0.598 1.64660263968207 28.9792037344001 -0.0533333333333334 0.598 0.684446860927139 0.00126496825425681 -0.429035047465696 6.11819097865356 P40926 MDH2 P40926.S261.p_MDH2 P40926_S261s _1_1_261_261 P40926 P40926|P40926-2|G3XAL0 Malate dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37289.37289.3 11.97 11.97 99 1 1 1 0 622.659 1785.9973 S261s TMT10 258 (R) FVFsLVDAMNGK (E) FVFS(1.0)LVDAMNGK K:TMT10,s:Phosphorylated S MDH2 35959.1 1 7 2175.1 94.5 HUMAN 1 -1.6466 28.9792 AGARPLTSPESLSRD-p P46379-3;S1111-p AGARPLTSPESLSRD 0.977340382035449 0.270783682243673 0.00433333333333333 0.128666666666667 0.195198038438693 7.47125988568268 0.00433333333333333 0.128666666666667 0.956049098152827 0.179008647569218 0.0577122318391829 1.5428229410159 P46379 BAG6 P46379.3.S1111.p_BAG6 P46379-3_S1111s _1_1_1111_1111 P46379-3 P46379-3|A0A0G2JK23|P46379-2|A0A024RCR6 Isoform 3 of Large proline-rich protein BAG6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9308.9308.2 7.57 7.57 1.125 4 1 1 0 583.7773 1086.579 S1111s Hydrogen 1108 (R) PLTsPESLSR (D) PLT(0.0)S(0.99)PES(0.0)LS(0.0)R s:Phosphorylated S BAG6 122796.4 7 9 590.1 264.42 HUMAN 1 0.1952 7.4713 AGCIHGLSNVKLNEH-p P48735;S423-p AGCIHGLSNVKLNEH 0.306820630007235 0.0276346695899257 -0.231 0.402333333333333 9.59558431232319 21.1294741542606 -0.231 0.402333333333333 0.109759360692918 0.00770996816059186 -1.91152700168837 4.12151268064225 P48735 IDH2 P48735.S423.p_IDH2 P48735_S423s _1_1_423_423 P48735 P48735|P48735-2 Isocitrate dehydrogenase [NADP], mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19973.19973.3 18.47 18.47 99 1 1 1 0 641.3383 1842.0308 S423s TMT10 414 (K) DLAGCIHGLsNVK (L) DLAGCIHGLS(1.0)NVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S IDH2 51364.8 2 5 2889.1 66.75 HUMAN 1 -9.5956 21.1295 AGDATVASEKESVM_-p Q15758;S535-p AGDATVASEKESVM_ 0.827100696431272 0.190301368636202 -0.064 -0.265333333333333 1.58741001042487 9.47509546366245 -0.064 -0.265333333333333 0.693839465714649 0.112847113196938 -0.41536015129321 -1.88992273038803 Q15758 SLC1A5 Q15758.S535.p_SLC1A5 Q15758_S535s _1_1_535_535 Q15758 Q15758|M0QXM4|Q15758-2|Q15758-3 Neutral amino acid transporter B(0) HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9325.9325.2 13.83 13.83 3.119 2 1 1 0 820.9191 1560.8634 S535s TMT10 526 (R) GPAGDATVAsEK (E) GPAGDAT(0.0)VAS(0.99)EK K:TMT10,s:Phosphorylated S SLC1A5 57053.7 3 5 1953.1 105.31 HUMAN 1 -1.5874 -9.4751 AGDLLEDSPKRPKEA-p P51858;S165-p AGDLLEDSPKRPKEA 0.930815506596034 0.0193866072688253 0.014 0.361333333333333 0.618722120927547 23.5263437208846 0.014 0.361333333333333 0.867217010348086 0.00443982270591143 0.175299851010839 4.67457744829454 P51858 HDGF P51858.S165.p_HDGF P51858_S165s _1_1_165_165 P51858 P51858-3|P51858-2 Hepatoma-derived growth factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10100.10534.4 19.87 15.67 99 1 1 1 0 827.1775 3225.7206 S165s Hydrogen 158 (R) AGDLLEDsPKRPKEAENPEGEEK (E) AGDLLEDS(1.0)PKRPKEAENPEGEEK K:TMT10-Lys-Only,s:Phosphorylated S HDGF 26901.9 109 5 213.1 437.7 HUMAN 1 0.6187 23.5263 AGDSDEESRADDKGV-p O95365;S341-p AGDSDEESRADDKGV 0.766186662098155 0.0504482638746165 0.0613333333333333 -0.280333333333333 2.21858785623086 17.3316011208253 0.0613333333333334 -0.280333333333333 0.59998613490451 0.0184858697164259 0.55668359755057 -3.32563840262107 O95365 ZBTB7A O95365.S341.p_ZBTB7A O95365_S341s_1_1_341_341 O95365 O95365 Zinc finger and BTB domain-containing protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14491.14491.5 10.9 9.2 1.132 4 1 1 0 684.3277 3321.6512 S341s M349m TMT10 330 (R) AGAAAGDSDEEsRADDKGVmDYYLK (Y) AGAAAGDS(0.0)DEES(0.99)RADDKGVM(1.0)DY(0.0)Y(0.0)LK K:TMT10,s:Phosphorylated S,m:Oxidized methionine ZBTB7A 62236.8 2 4 749.1 232.5 HUMAN 1 2.2186 -17.3316 AGDSLPGSPSRGLGP-p Q13425;S86-p AGDSLPGSPSRGLGP 0.723063863780764 0.0271768380068364 -0.302666666666667 -1.16133333333333 2.66413141119754 21.242697125039 -0.302666666666667 -1.16133333333333 0.541485534140413 0.00751156254064549 -0.651327104251765 -4.14667684403349 Q13425 SNTB2 Q13425.S86.p_SNTB2 Q13425_S86s _1_1_86_86 Q13425 Q13425|Q13425-2 Beta-2-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36605.36605.5 26.62 26.62 1.387 7 1 1 0 1000.498 4918.4908 S86s TMT10 39 (R) VVAELSGESLSLTGDAAAAELEPALGPAAAAFNGLPNGGGAGDSLPGsPSR (G) VVAELS(0.0)GES(0.0)LS(0.0)LT(0.0)GDAAAAELEPALGPAAAAFNGLPNGGGAGDS(0.0)LPGS(0.99)PS(0.0)R s:Phosphorylated S SNTB2 58405 2 2 637.1 255.93 HUMAN 1 -2.6641 -21.2427 AGDTIPKSPFVVQVG-p O75369-8;S440-p AGDTIPKSPFVVQVG 0.847261555328042 0.204649405202067 -0.0306666666666667 -0.222333333333333 1.39453679175341 9.06444540414548 -0.0306666666666666 -0.222333333333333 0.725347837854492 0.124038201230301 -0.370111988214358 -1.81885999521168 O75369 FLNB O75369.8.S440.p_FLNB O75369-8_S440s _1_1_440_440 O75369-8 O75369-8|O75369-9|O75369-2 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.31265.31265.4 15.03 15.03 1.657 2 1 1 0 883.9475 3452.7859 S440s TMT10 430 (K) IFFAGDTIPKsPFVVQVGEACNPNACR (A) IFFAGDT(0.0)IPKS(0.99)PFVVQVGEACNPNACR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S FLNB 283797.6 1 5 67.1 680.07 HUMAN 1 -1.3945 -9.0644 AGDTSTVSPPAGRSL-p O15360;S1377-p AGDTSTVSPPAGRSL 0.446387956815461 0.0393650911814023 -0.115 0.252333333333333 6.46179587687551 18.8498425169712 -0.115 0.252333333333333 0.225850165068208 0.0130321403449188 -1.36643388875187 3.63319309326086 O15360 FANCA O15360.S1377.p_FANCA O15360_S1377s _1_1_1377_1377 O15360 O15360|O15360-3 Fanconi anemia group A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30580.30580.3 16.27 16.27 1.265 4 1 1 0 742.0568 2144.1913 S1377s TMT10 1364 (K) LVQLFVAGDTSTVsPPAGR (S) LVQLFVAGDT(0.0)S(0.0)T(0.0)VS(0.99)PPAGR s:Phosphorylated S FANCA 164940.3 1 1 4617.1 28.71 HUMAN 1 -6.4618 18.8498 AGEALRGSDSQLCPK-p O75815;S395-p AGEALRGSDSQLCPK 0.538878785012306 0.0116937978831548 0.0933333333333333 0.542 4.96032893949359 27.0190711386148 0.0933333333333333 0.542 0.319129613361149 0.00198651974526771 1.0967831216323 5.56631170677129 O75815 BCAR3 O75815.S395.p_BCAR3 O75815_S395s _1_1_395_395 O75815 O75815|O75815-3|O75815-2 Breast cancer anti-estrogen resistance protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12509.12509.4 17.53 16.32 2.24 2 1 1 0 848.2118 3309.8581 S395s TMT10 388 (R) AGEALRGsDSQLCPKPPPKPCK (V) AGEALRGS(0.99)DS(0.0)QLCPKPPPKPCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BCAR3 93533.8 4 13 401.1 327.42 HUMAN 1 4.9603 27.0191 AGEEKWNSVSPASAG-p Q86UE4;S306-p AGEEKWNSVSPASAG 0.89510048826751 0.0047629261337893 -0.0196666666666667 -0.560666666666667 0.943035501133692 33.9493814752977 -0.0196666666666667 -0.560666666666667 0.804815718645321 0.000402774393601892 -0.259527805068942 -7.71533853192316 Q86UE4 MTDH Q86UE4.S306.p_MTDH Q86UE4_S306sS308s_2_2_306_308 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20369.20369.4 11.39 11.39 4.347 6 2 2 0 770.8878 2920.5983 S306s S308s TMT10 293 (K) LSSQISAGEEKWNsVsPASAGK (R) LS(0.0)S(0.0)QIS(0.0)AGEEKWNS(0.99)VS(0.99)PAS(0.0)AGK K:TMT10,s:Phosphorylated S MTDH 63892.9 6 28 77.1 644.48 HUMAN 1 -0.943 -33.9494 AGEGGEASVSPEKTS-p E7ETY2;S1376-p AGEGGEASVSPEKTS 0.198291367686798 0.072907361558901 0.211333333333333 -0.211666666666667 13.6961569198315 15.1055500062944 0.211333333333333 -0.211666666666667 0.0426957166898968 0.0308634875452444 2.63729983600571 -2.89636437184288 E7ETY2 TCOF1 E7ETY2.S1376.p_TCOF1 E7ETY2_S1376sS1378s_2_2_1376_1378 E7ETY2 E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13470.13470.3 13.02 11.21 13.023 7 2 2 0 947.471 2680.4608 S1376s S1378s TMT10 1367 (K) LGAGEGGEAsVsPEKTSTTSK (G) LGAGEGGEAS(0.99)VS(0.99)PEKT(0.0)S(0.0)T(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S TCOF1 152529.5 12 45 19.1 1034.65 HUMAN 1 13.6962 -15.1056 AGEKEAKSD______-p P05114;S99-p AGEKEAKSD______ 0.0613809554565416 0.0239352163827286 0.790333333333333 -0.507666666666667 26.4532697088267 22.0972713838518 0.790333333333333 -0.507666666666667 0.00226293994774959 0.00616982522263185 5.42151446153444 -4.33959313208221 P05114 HMGN1 P05114.S99.p_HMGN1 P05114_S99s _1_1_99_99 P05114 A6NEL0|P05114|A6NL93 Non-histone chromosomal protein HMG-14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12166.12166.5 17.16 15.01 1.21 5 1 1 0 812.7996 3979.9914 S99s TMT10 72 (K) EDLPAENGETKTEESPASDEAGEKEAKsD (-) EDLPAENGET(0.0)KT(0.0)EES(0.0)PAS(0.0)DEAGEKEAKS(0.99)D K:TMT10,s:Phosphorylated S HMGN1 10658.7 7 5 878.1 208.13 HUMAN 1 26.4533 -22.0973 AGEPDGESLDEQPSS-p Q9H3Q1;S64-p AGEPDGESLDEQPSS 0.69338416820811 0.286729588773471 0.0556666666666667 0.164 2.98394042268555 7.15655743659533 0.0556666666666667 0.164 0.503043981887 0.192461672867257 0.71714852618674 1.48797054833403 Q9H3Q1 CDC42EP4 Q9H3Q1.S64.p_CDC42EP4 Q9H3Q1_S64s _1_1_64_64 Q9H3Q1 Q9H3Q1 Cdc42 effector protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10221.10221.2 22.27 22.27 6.851 6 1 1 0 1223.0574 2365.1407 S64s TMT10 57 (K) AGEPDGEsLDEQPSSSSSK (R) AGEPDGES(0.99)LDEQPS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CDC42EP4 38036.3 2 4 635.1 256.47 HUMAN 1 2.9839 7.1566 AGESAGRSPGELAWD-p Q96NY7;S322-p AGESAGRSPGELAWD 0.336575596768937 0.0583147404245154 -0.231333333333333 0.345666666666667 8.81365574502876 16.4445970029428 -0.231333333333333 0.345666666666667 0.131411818595329 0.0226746347325888 -1.7761063760581 3.1517257560394 Q96NY7 CLIC6 Q96NY7.S322.p_CLIC6 Q96NY7_S322s _1_1_322_322 Q96NY7 Q96NY7|Q96NY7-2 Chloride intracellular channel protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26319.26319.3 12.55 9.68 99 1 1 1 0 755.3573 2184.1022 S322s Hydrogen 322 (R) sPGELAWDAAEEAEVPGVK (G) S(1.0)PGELAWDAAEEAEVPGVK K:TMT10-Lys-Only,s:Phosphorylated S CLIC6 73238.4 2 4 1280.1 158.88 HUMAN 1 -8.8137 16.4446 AGETLSSTGPFALEP-p P18583-5;T1596-p AGETLSSTGPFALEP 0.553101092841527 0.0213404996074559 0.0936666666666667 0.31 4.74709980346698 22.846505151026 0.0936666666666667 0.31 0.335189202085505 0.00519217695054935 1.05750219807535 4.51322363917818 P18583 SON P18583.5.T1596.p_SON P18583-5_T1596t _1_1_1596_1596 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-2|P18583-6 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28686.28686.4 18.55 16.45 2.161 11 1 1 0 949.2031 3713.8119 T1596t Hydrogen 1576 (R) TVLDTYPGVSEADAGETLSStGPFALEPDATGTSK (G) T(0.0)VLDT(0.0)Y(0.0)PGVS(0.0)EADAGET(0.0)LS(0.0)S(0.0)T(0.99)GPFALEPDAT(0.0)GT(0.0)S(0.0)K K:TMT10-Lys-Only,t:Phosphorylated T SON 267429.6 4 19 45.1 778.56 HUMAN 1 4.7471 22.8465 AGEVPARSPGAFDMS-p Q9Y6I3-1;S521-p AGEVPARSPGAFDMS 0.577800838163311 0.252490675299574 -0.0736666666666667 -0.124 4.38322364628203 7.87207052719597 -0.0736666666666667 -0.124 0.364483300747473 0.16322735653184 -0.989710267549057 -1.61245767032339 Q9Y6I3 EPN1 Q9Y6I3.1.S521.p_EPN1 Q9Y6I3-1_S521s _1_1_521_521 Q9Y6I3-1 Q9Y6I3-1|Q9Y6I3-3 Isoform 2 of Epsin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29139.29139.4 28.9 28.9 2.726 7 1 1 0 910.7045 3559.8264 S521s TMT10 498 (R) TALPTSGSSAGELELLAGEVPARsPGAFDMSGVR (G) T(0.0)ALPT(0.0)S(0.0)GS(0.0)S(0.0)AGELELLAGEVPARS(0.99)PGAFDMS(0.0)GVR s:Phosphorylated S EPN1 69266.5 8 3 856.1 210.87 HUMAN 1 -4.3832 -7.8721 AGEYDSVSESEDEEM-p Q9BZE4;S470-p AGEYDSVSESEDEEM 0.959656130624186 0.565469947767968 0.012 0.0723333333333333 0.345920362438911 3.33837897368622 0.012 0.0723333333333334 0.923438471416246 0.463619935951423 0.100668378465654 0.78822341783377 Q9BZE4 GTPBP4 Q9BZE4.S470.p_GTPBP4 Q9BZE4_S470s _1_1_470_470 Q9BZE4 Q9BZE4|Q9BZE4-2 Nucleolar GTP-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23590.23590.5 15.85 13.85 1.251 5 1 1 0 931.465 4573.2958 S470s TMT10 449 (K) KLEELEKEEELRTAAGEYDSVsESEDEEMLEIR (Q) KLEELEKEEELRT(0.0)AAGEY(0.0)DS(0.0)VS(0.99)ES(0.0)EDEEMLEIR K:TMT10,s:Phosphorylated S GTPBP4 74362.6 2 1 3169.1 58.8 HUMAN 1 0.3459 3.3384 AGFDDDGSEFHEHIF-p Q92665;S326-p AGFDDDGSEFHEHIF 0.910128808420206 0.679078585656714 0.0223333333333333 0.046 0.802054036382881 2.2974700505495 0.0223333333333333 0.046 0.831370473659689 0.589186781678482 0.223461142477482 0.573645287150079 Q92665 MRPS31 Q92665.S326.p_MRPS31 Q92665_S326s_1_1_326_326 Q92665 Q92665 28S ribosomal protein S31, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32270.32270.4 11.53 11.53 0 1 1 1 0 944.4453 3693.7902 N317n S326s TMT10 310 (K) LWEFPINnEAGFDDDGsEFHEHIFLEK (H) LWEFPIN(0.50)N(0.50)EAGFDDDGS(1.0)EFHEHIFLEK K:TMT10,n:Deamidated,s:Phosphorylated S MRPS31 45431.8 1 6 2669.1 74.39 HUMAN 1 0.8021 2.2975 AGFFRVESPVKLFSG-p Q15398;S618-p AGFFRVESPVKLFSG 0.794385697846618 0.00182687357791697 -0.049 -0.862333333333333 1.92962371775368 43.1027278649316 -0.049 -0.862333333333333 0.641265134793366 4.8947127897523e-05 -0.493159681023408 -11.6189741852796 Q15398 DLGAP5 Q15398.S618.p_DLGAP5 Q15398_S618s _1_1_618_618 Q15398 Q15398|Q15398-3|Q15398-1 Disks large-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30446.30446.4 16.53 16.53 99 1 1 1 0 563.059 2169.2472 S618s TMT10 607 (K) IVFDAGFFRVEsPVK (L) IVFDAGFFRVES(1.0)PVK K:TMT10,s:Phosphorylated S DLGAP5 95797.9 7 4 355.1 348.78 HUMAN 1 -1.9296 -43.1027 AGFPREPSPPQAGPG-p Q8NHW3;S336-p AGFPREPSPPQAGPG 0.614617666332898 0.0243892485493935 -0.139333333333333 -0.378666666666667 3.92355628377805 21.9687034421432 -0.139333333333333 -0.378666666666667 0.405176614780738 0.00635520634074434 -0.902488855995216 -4.31022668028859 Q8NHW3 MAFA Q8NHW3.S336.p_MAFA Q8NHW3_S336s _1_1_336_336 Q8NHW3 Q8NHW3 Transcription factor MafA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13151.13151.4 15.45 14.48 9.65 2 1 1 0 700.6036 2719.4316 S336s TMT10 321 (R) GGPGSAGGAGFPREPsPPQAGPGGAK (G) GGPGS(0.0)AGGAGFPREPS(0.99)PPQAGPGGAK K:TMT10,s:Phosphorylated S MAFA 37266.6 2 2 4195.1 35.58 HUMAN 1 -3.9236 -21.9687 AGGAAPCSPRGARRG-p A6NEL2;S106-p AGGAAPCSPRGARRG 0.643173153319585 0.99229111578383 0.0636666666666666 -0.000999999999999982 3.58280698420629 0.0484757476153225 0.0636666666666666 -0.000999999999999983 0.438247352929769 0.988900110087433 0.836492591096955 -0.0145650447899737 A6NEL2 SOWAHB A6NEL2.S106.p_SOWAHB A6NEL2_S106s _1_1_106_106 A6NEL2 A6NEL2 Ankyrin repeat domain-containing protein SOWAHB HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14572.14572.4 20.26 16.09 7.455 3 1 1 0 914.7062 3575.8339 S106s TMT10 77 (R) YRDLLGEEGLQRPREPPAAAPSAGGAAPCsPR (G) Y(0.0)RDLLGEEGLQRPREPPAAAPS(0.0)AGGAAPCS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S SOWAHB 86311.4 5 2 711.1 238.55 HUMAN 1 3.5828 -0.0485 AGGAGFGTDGDDQEA-p Q96EB6;T719-p AGGAGFGTDGDDQEA 0.723870912776259 0.433452438287772 0.0706666666666667 0.0773333333333334 2.65639191475961 4.8374672210153 0.0706666666666667 0.0773333333333334 0.54245136768424 0.328286692097015 0.64971370142873 1.07397609889638 Q96EB6 SIRT1 Q96EB6.T719.p_SIRT1 Q96EB6_T719t _1_1_719_719 Q96EB6 Q96EB6|Q96EB6-2|E9PC49|B0QZ35 NAD-dependent protein deacetylase sirtuin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31031.31031.5 22.26 16.43 2.766 6 1 1 0 897.4313 4403.1552 T719t TMT10 712 (R) AGGAGFGtDGDDQEAINEAISVKQEVTDMNYPSNKS (-) AGGAGFGT(0.99)DGDDQEAINEAIS(0.0)VKQEVT(0.0)DMNY(0.0)PS(0.0)NKS(0.0) K:TMT10,t:Phosphorylated T SIRT1 82763.6 13 8 475.1 301.26 HUMAN 1 2.6564 4.8375 AGGAVPQSAPPVPSG-p P50548;S131-p AGGAVPQSAPPVPSG 0.836405692955871 0.744277197880846 0.032 -0.032 1.49793124821573 1.77027366386709 0.032 -0.032 0.708283093063367 0.665231236376334 0.394502921510766 -0.457253368882955 P50548 ERF P50548.S131.p_ERF P50548_S131s_1_1_131_131 P50548 P50548 ETS domain-containing transcription factor ERF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.35929.35929.4 12.39 12.26 2.832 4 1 1 0 907.9772 3547.9263 N115n S131s TMT10 111 (K) LVLVnYPFIDVGLAGGAVPQsAPPVPSGGSHFR (F) LVLVN(1.0)Y(0.0)PFIDVGLAGGAVPQS(0.99)APPVPS(0.0)GGS(0.0)HFR n:Deamidated,s:Phosphorylated S ERF 59044.2 1 3 1246.1 162.15 HUMAN 1 1.4979 -1.7703 AGGEDCESPAPEADR-p Q9HA47;S11-p AGGEDCESPAPEADR 0.168030571003973 0.0554860227632965 0.274666666666667 0.278333333333333 15.4653208507817 16.7304760228902 0.274666666666667 0.278333333333333 0.0284097828966676 0.0212301174949331 2.96618663123258 3.20734092688379 Q9HA47 UCK1 Q9HA47.S11.p_UCK1 Q9HA47_S11s _1_1_11_11 Q9HA47 Q9HA47|G3V170|Q9HA47-2 Uridine-cytidine kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15187.15187.4 18.8 18.8 4.55 5 1 1 0 965.7046 3779.8245 S11s Acetyl 2 (M) ASAGGEDCEsPAPEADRPHQRPFLIGVSGGTASGK (S) AS(0.0)AGGEDCES(0.99)PAPEADRPHQRPFLIGVS(0.0)GGT(0.0)AS(0.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UCK1 31662.3 2 1 2617.1 76.65 HUMAN 1 15.4653 16.7305 AGGFRSPSPGLFRAS-p Q9HAW4;S810-p AGGFRSPSPGLFRAS 0.717179227515211 0.0116327352591839 -0.0576666666666667 -0.420333333333333 2.72381975126026 27.0513944291079 -0.0576666666666667 -0.420333333333333 0.53409440058421 0.00197178953392384 -0.663736177683217 -5.57509394094622 Q9HAW4 CLSPN Q9HAW4.S810.p_CLSPN Q9HAW4_S808sS810s_2_2_808_810 Q9HAW4 Q9HAW4|Q9HAW4-3|E7ESG2|Q9HAW4-2 Claspin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29870.29870.3 9 9 1.256 5 2 2 0 825.718 2315.2134 S808s S810s TMT10 796 (R) GTSFFPTAGGFRsPsPGLFR (A) GT(0.0)S(0.0)FFPT(0.0)AGGFRS(0.99)PS(0.99)PGLFR s:Phosphorylated S CLSPN 151718.8 2 14 506.1 289.61 HUMAN 1 -2.7238 -27.0514 AGGGAGGSLRREDRL-p Q7L0X0;S798-p AGGGAGGSLRREDRL 0.505955843363506 0.97182531891149 0.117333333333333 -0.00399999999999997 5.46054097632446 0.17502160398646 0.117333333333333 -0.00399999999999997 0.284410681091778 0.960501040360772 1.18782526691026 -0.0518550513445199 Q7L0X0 TRIL Q7L0X0.S798.p_TRIL Q7L0X0_S798s _1_1_798_798 Q7L0X0 Q7L0X0 TLR4 interactor with leucine rich repeats HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11181.11181.3 11.64 11.64 6.867 2 1 1 0 583.2765 1667.8485 S798s TMT10 787 (R) FMDSAGGGAGGsLRR (E) FMDS(0.0)AGGGAGGS(0.99)LRR s:Phosphorylated S TRIL 89691 3 3 3227.1 56.63 HUMAN 1 5.4605 -0.175 AGGGAGSSEDDAQSR-p Q9H4A6;S36-p AGGGAGSSEDDAQSR 0.181399305482146 0.13593628768413 0.298 -0.234333333333333 14.6063172502216 11.4196445285293 0.298 -0.234333333333333 0.0346232853461306 0.0721166504484301 2.80493656696632 -2.22874848568538 Q9H4A6 GOLPH3 Q9H4A6.S36.p_GOLPH3 Q9H4A6_S35sS36s_2_2_35_36 Q9H4A6 Q9H4A6|D6REM1 Golgi phosphoprotein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3603.3603.3 13.81 13.81 7.533 3 2 2 0 608.9055 1664.7673 S35s S36s TMT10 28 (R) AAGGGAGssEDDAQSR (R) AAGGGAGS(0.99)S(0.99)EDDAQS(0.0)R s:Phosphorylated S GOLPH3 34095.2 3 3 3751.1 43.88 HUMAN 1 14.6063 -11.4196 AGGGRRATISSPLEL-p Q96GS4;T196-p AGGGRRATISSPLEL 0.248798577375663 0.100656359876757 0.262333333333333 0.208 11.5300993089042 13.1749885951869 0.262333333333333 0.208 0.0703056243109602 0.0481394518167088 2.24925365245825 2.5412304917306 Q96GS4 BORCS6 Q96GS4.T196.p_BORCS6 Q96GS4_T196t _1_1_196_196 Q96GS4 Q96GS4 BLOC-1-related complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22700.22700.3 18.34 18.34 1.578 5 1 1 0 623.6603 1788.9905 T196t TMT10 195 (R) AtISSPLELEGTVSR (H) AT(0.99)IS(0.0)S(0.0)PLELEGT(0.0)VS(0.0)R t:Phosphorylated T BORCS6 37625 5 5 1264.1 160.44 HUMAN 1 11.5301 13.175 AGGKRPGSVSSTDQE-p Q9H1B7;S334-p AGGKRPGSVSSTDQE 0.805134921082359 0.0386745972221711 0.054 0.257333333333333 1.81438561805969 18.9687375193243 0.054 0.257333333333333 0.658508580370232 0.0126802042191531 0.467292419217638 3.65784238411379 Q9H1B7 IRF2BPL Q9H1B7.S334.p_IRF2BPL Q9H1B7_S334s _1_1_334_334 Q9H1B7 Q9H1B7 Interferon regulatory factor 2-binding protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4001.4001.3 9.91 7.28 2.381 4 1 1 0 543.259 1547.7975 S334s TMT10 331 (K) RPGsVSSTDQER (E) RPGS(0.99)VS(0.0)S(0.0)T(0.0)DQER s:Phosphorylated S IRF2BPL 83627.3 4 4 282.1 386.92 HUMAN 1 1.8144 18.9687 AGGPKPPSGKKDWDD-p P50990;S537-p AGGPKPPSGKKDWDD 0.279270057127608 0.0791301485566417 -0.208 0.216666666666667 10.4738969818738 14.6211532224365 -0.208 0.216666666666667 0.0896623880947962 0.0345052102283279 -2.06417647055932 2.80592098629509 P50990 CCT8 P50990.S537.p_CCT8 P50990_S537s _1_1_537_537 P50990 P50990|P50990-2|P50990-3 T-complex protein 1 subunit theta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17742.17742.5 12.81 12.81 99 1 1 1 0 649.7905 3164.9566 S537s TMT10 521 (R) VDQIIMAKPAGGPKPPsGKK (D) VDQIIMAKPAGGPKPPS(1.0)GKK K:TMT10,s:Phosphorylated S CCT8 60190.1 3 8 1367.1 149.5 HUMAN 1 -10.4739 14.6212 AGGPRPESPVPAGRA-p Q9BVG9;S16-p AGGPRPESPVPAGRA 0.709670809730963 0.169808560434942 -0.0596666666666667 -0.154 2.79996668614256 10.1247341901906 -0.0596666666666667 -0.154 0.524811485957835 0.0971687421857112 -0.679481944570037 -2.00256839701453 Q9BVG9 PTDSS2 Q9BVG9.S16.p_PTDSS2 Q9BVG9_S16s _1_1_16_16 Q9BVG9 Q9BVG9|E9PLE4|E9PS47 Phosphatidylserine synthase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4514.4514.4 10.99 10.99 99 1 1 1 0 482.7482 1848.0038 S16s TMT10 7 (R) RDAGGPRPEsPVPAGR (A) RDAGGPRPES(1.0)PVPAGR s:Phosphorylated S PTDSS2 56822.4 3 1 4599.1 28.99 HUMAN 1 -2.8 -10.1247 AGGQALASDSEEADE-p Q9NQT8;S1689-p AGGQALASDSEEADE 0.55663840787346 0.155750902546266 0.0853333333333333 0.167666666666667 4.6970533532522 10.6188147168758 0.0853333333333333 0.167666666666667 0.3390741366869 0.0867198520606971 1.04823716266091 2.08855114740776 Q9NQT8 KIF13B Q9NQT8.S1689.p_KIF13B Q9NQT8_S1689s _1_1_1689_1689 Q9NQT8 Q9NQT8|Q9NQT8-2 Kinesin-like protein KIF13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29631.29631.5 30.69 30.69 1.181 4 1 1 0 1146.7402 5649.6903 S1689s TMT10 1662 (R) MLAGDPGCSPGAEGNAPAPGAGGQALAsDSEEADEVPEWLREGEFVTVGAHK (T) MLAGDPGCS(0.0)PGAEGNAPAPGAGGQALAS(0.99)DS(0.0)EEADEVPEWLREGEFVT(0.0)VGAHK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIF13B 204097.3 12 14 335.1 355.82 HUMAN 1 4.6971 10.6188 AGGSAALSPSKKRKN-p Q92522;S31-p AGGSAALSPSKKRKN 0.367685965345823 0.00639800023666993 0.125 -0.485333333333333 8.06244586062531 31.561684242894 0.125 -0.485333333333333 0.156226755665205 0.000697961674189562 1.64599160335762 -6.90999464457005 Q92522 H1FX Q92522.S31.p_H1FX Q92522_S31s _1_1_31_31 Q92522 Q92522 Histone H1x HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8979.9392.2 14.7 10.23 1.603 3 1 1 0 742.3997 1403.8259 S31s TMT10 24 (K) AGGSAALsPSK (K) AGGS(0.0)AALS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S H1FX 22486.7 19 2 2494.1 81.23 HUMAN 1 8.0624 -31.5617 AGGSSTPSPRPSTRF-p A4D1S0;S143-p AGGSSTPSPRPSTRF 0.102728705875057 0.140994003410884 0.351666666666667 0.158666666666667 20.8928674932 11.210031740386 0.351666666666667 0.158666666666667 0.00814166541079165 0.0756827363732545 4.0732437765437 2.19193666856588 A4D1S0 KLRG2 A4D1S0.S143.p_KLRG2 A4D1S0_S143s _1_1_143_143 A4D1S0 A4D1S0|A4D1S0-2 Killer cell lectin-like receptor subfamily G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7323.7323.3 16.08 16.08 1.254 6 1 1 0 816.4461 2367.3509 S143s TMT10 130 (R) VKPVGAAGGSSTPsPRPSTR (F) VKPVGAAGGS(0.0)S(0.0)T(0.0)PS(0.99)PRPS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S KLRG2 43534.4 3 8 945.1 197.69 HUMAN 1 20.8929 11.21 AGHFNDESPLGLRRI-p V9GYM8;S208-p AGHFNDESPLGLRRI 0.950454138446055 0.15641637371979 -0.00966666666666667 -0.199666666666667 0.437065378575506 10.5957518804666 -0.00966666666666667 -0.199666666666667 0.904260295498943 0.0871815953448932 -0.126027654961531 -2.08453001941063 V9GYM8 NotFound V9GYM8.S208.p_NotFound V9GYM8_S208s _1_1_208_208 V9GYM8 V9GYM8|Q92974|Q92974-2|Q92974-3 Rho guanine nucleotide exchange factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16796.16796.3 11.16 11.16 11.16 5 1 1 0 860.7659 2500.3106 S208s TMT10 194 (K) SVSTTNIAGHFNDEsPLGLRR (I) S(0.0)VS(0.0)T(0.0)T(0.0)NIAGHFNDES(0.99)PLGLRR s:Phosphorylated S ARHGEF2 117095.6 2 11 380.1 335.31 HUMAN 1 -0.4371 -10.5958 AGHLPRGSPVTTREP-p Q9Y618;S1566-p AGHLPRGSPVTTREP 0.428639834168814 0.229901465464453 0.157 0.124666666666667 6.77552096627669 8.41138346276353 0.157 0.124666666666667 0.210110571176291 0.144165603296782 1.42165925475309 1.70589019695943 Q9Y618 NCOR2 Q9Y618.S1566.p_NCOR2 Q9Y618_S1566s _1_1_1566_1566 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13981.13981.5 14.32 14.32 3.079 7 1 1 0 736.9713 3600.8509 S1566s TMT10 1546 (R) QSPLTYEDHGAPFAGHLPRGsPVTTREPTPR (L) QS(0.0)PLT(0.0)Y(0.0)EDHGAPFAGHLPRGS(0.99)PVT(0.0)T(0.0)REPT(0.0)PR s:Phosphorylated S NCOR2 275540.8 4 25 16.1 1053.89 HUMAN 1 6.7755 8.4114 AGHSRTVSDSIKKLI-p Q9Y490;S1641-p AGHSRTVSDSIKKLI 0.138656564829318 0.00575569388165388 -0.451333333333333 -1.026 17.5697706851999 32.3987815280646 -0.451333333333333 -1.026 0.0174993908591596 0.000575601407448372 -3.37571252571787 -7.18388413940308 Q9Y490 TLN1 Q9Y490.S1641.p_TLN1 Q9Y490_S1641s _1_1_1641_1641 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10752.10752.3 9.61 4.32 2.11 3 1 1 0 548.9896 1564.9877 S1641s TMT10 1639 (R) TVsDSIKK (L) T(0.0)VS(0.99)DS(0.0)IKK K:TMT10,s:Phosphorylated S TLN1 271930.4 1 23 267.1 395.2 HUMAN 1 -17.5698 -32.3988 AGIGDTPSLEDEAAG-p P10636-7;S84-p AGIGDTPSLEDEAAG 0.874541241919458 0.0480181724894645 0.0593333333333333 0.582333333333333 1.1395155391122 17.6377242498243 0.0593333333333333 0.582333333333333 0.769216242527944 0.0172277108923248 0.308517373698994 3.38661271702823 P10636 MAPT P10636.7.S84.p_MAPT P10636-7_S84s _1_1_84_84 P10636-7 P10636-7|P10636-4 Isoform Tau-E of Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16849.16849.3 31.57 31.57 1.992 6 1 1 0 1107.1774 3239.5501 S84s TMT10 68 (K) STPTAEAEEAGIGDTPsLEDEAAGHVTQAR (M) S(0.0)T(0.0)PT(0.0)AEAEEAGIGDT(0.0)PS(0.99)LEDEAAGHVT(0.0)QAR s:Phosphorylated S MAPT 43080.1 2 39 119.2 551.6 HUMAN 1 1.1395 17.6377 AGIMITASHNPKQDN-p Q96G03;S165-p AGIMITASHNPKQDN 0.766827003201842 0.0353958686072544 -0.0463333333333333 0.265333333333333 2.20781162972864 19.5314645009727 -0.0463333333333333 0.265333333333333 0.601476739778409 0.0111391884143351 -0.554346964130645 3.77568340523727 Q96G03 PGM2 Q96G03.S165.p_PGM2 Q96G03_S165s _1_1_165_165 Q96G03 Q96G03|Q96G03-2 Phosphoglucomutase-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18641.18641.2 21.04 16.81 2.167 2 1 1 0 1026.0311 1971.092 S165s TMT10 156 (K) LCAGIMITAsHNPK (Q) LCAGIMIT(0.0)AS(0.99)HNPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PGM2 68795.6 46 1 3190.1 58.14 HUMAN 1 -2.2078 19.5315 AGIRKVPSFTFTPTV-p Q9Y6N7-2;S944-p AGIRKVPSFTFTPTV 0.840696231762748 0.127212784009323 -0.0293333333333333 -0.172 1.45542458074191 11.8037331536523 -0.0293333333333333 -0.172 0.715249465488563 0.0660125766287507 -0.384513994454499 -2.29644612053968 Q9Y6N7 ROBO1 Q9Y6N7.2.S944.p_ROBO1 Q9Y6N7-2_S944s _1_1_944_944 Q9Y6N7-2 Q9Y6N7-2|Q9Y6N7-3|Q9Y6N7-4|A0A0A0MSX4 Isoform 2 of Roundabout homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.22106.22106.3 12.49 12.49 1.141 6 1 1 0 770.7491 2230.2636 S944s TMT10 941 (R) KVPsFTFTPTVTYQR (G) KVPS(0.99)FT(0.0)FT(0.0)PT(0.0)VT(0.0)Y(0.0)QR K:TMT10,s:Phosphorylated S ROBO1 182465.9 10 2 832.1 215.62 HUMAN 1 -1.4554 -11.8037 AGKAKRASFITANGV-p Q9H3U1;S472-p AGKAKRASFITANGV 0.0510526469894828 0.0216261079948875 -0.544666666666667 -0.379333333333333 28.4083440439433 22.7674945906392 -0.544666666666667 -0.379333333333333 0.0014426653320319 0.00528750195471989 -5.96210053706067 -4.49470912184966 Q9H3U1 UNC45A Q9H3U1.S472.p_UNC45A Q9H3U1_S472s _1_1_472_472 Q9H3U1 A0A1W2PNX8|Q9H3U1|Q9H3U1-2 Protein unc-45 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23749.23749.3 13.2 13.2 3.84 3 1 1 0 672.387 1935.1792 S472s TMT10 470 (K) RAsFITANGVSLLK (D) RAS(0.99)FIT(0.0)ANGVS(0.0)LLK K:TMT10,s:Phosphorylated S UNC45A 104330.3 2 3 2206.1 93.47 HUMAN 1 -28.4083 -22.7675 AGKAKRKSPEEESRP-p Q9BWH6;S519-p AGKAKRKSPEEESRP 0.777290999496381 0.0432441478414521 -0.0406666666666667 0.272 2.10151742452347 18.2751074137167 -0.0406666666666667 0.272 0.616379601256763 0.0148761058066761 -0.531168250433483 3.51522380937796 Q9BWH6 RPAP1 Q9BWH6.S519.p_RPAP1 Q9BWH6_S519s _1_1_519_519 Q9BWH6 Q9BWH6|Q9BWH6-2|H3BRE8 RNA polymerase II-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5275.5275.4 16.54 16.54 5.453 2 1 1 0 601.3215 2322.293 S519s TMT10 517 (K) RKsPEEESRPPPDLAR (H) RKS(0.99)PEEES(0.0)RPPPDLAR K:TMT10,s:Phosphorylated S RPAP1 154292.4 2 4 996.1 190.51 HUMAN 1 -2.1015 18.2751 AGKDGDKSPMSSLQI-p Q9UER7;S495-p AGKDGDKSPMSSLQI 0.541665699945013 0.0117994644063735 -0.136 0.422333333333333 4.91206554862969 26.9492592609494 -0.136 0.422333333333334 0.322695898223733 0.0020187106485747 -1.08791874467551 5.54737901358116 Q9UER7 DAXX Q9UER7.S495.p_DAXX Q9UER7_S495s _1_1_495_495 Q9UER7 Q9UER7|Q9UER7-2|Q9UER7-4|Q9UER7-5|Q9UER7-3 Death domain-associated protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16674.16674.3 16.48 13.15 1.139 4 1 1 0 835.0953 2423.3055 S495s TMT10 491 (K) DGDKsPMSSLQISNEK (N) DGDKS(0.99)PMS(0.0)S(0.0)LQIS(0.0)NEK K:TMT10,s:Phosphorylated S DAXX 82112.9 5 5 315.1 368.97 HUMAN 1 -4.9121 26.9493 AGKGTPLTPPACACS-p Q8TD19;T886-p AGKGTPLTPPACACS 0.911753399332893 0.198833451009419 0.0236666666666667 -0.138 0.782367013522311 9.23070215305886 0.0236666666666667 -0.138 0.835147717778279 0.119379507999205 0.218359743273492 -1.84762275195646 Q8TD19 NEK9 Q8TD19.T886.p_NEK9 Q8TD19_T886t _1_1_886_886 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22435.22435.4 23.28 20.53 2.387 5 1 1 0 931.2187 3641.8854 T886t TMT10 872 (R) LNPAVTCAGKGTPLtPPACACSSLQVEVER (L) LNPAVT(0.0)CAGKGT(0.0)PLT(0.99)PPACACS(0.0)S(0.0)LQVEVER C:Carbamidomethylation,K:TMT10,t:Phosphorylated T NEK9 108935.2 5 15 224.1 425.83 HUMAN 1 0.7824 -9.2307 AGKRGRWSGVKEEPS-p O75145;S547-p AGKRGRWSGVKEEPS 0.0624138463249755 0.262420560365895 -0.551666666666667 -0.135 26.1983699680205 7.65478728372675 -0.551666666666667 -0.135 0.00239973343892632 0.171601575805456 -5.35383142435291 -1.57473508320116 O75145 PPFIA3 O75145.S547.p_PPFIA3 O75145_S547s _1_1_547_547 O75145 O75145|O75145-2|R4GN36 Liprin-alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7892.7892.3 9.51 9.51 9.508 2 1 1 0 633.3365 1818.0274 S547s Hydrogen 544 (R) GRWsGVKEEPSK (D) GRWS(0.99)GVKEEPS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S PPFIA3 134064.6 2 9 248.2 410.18 HUMAN 1 -26.1984 -7.6548 AGLAARMSQVPAPVP-p Q9UQ35;S2209-p AGLAARMSQVPAPVP 0.53706412572523 0.162419253836632 0.086 0.268666666666667 4.99102865289807 10.3783215918505 0.086 0.268666666666667 0.316881682061034 0.0916574648232043 1.10241379502041 2.046658194667 Q9UQ35 SRRM2 Q9UQ35.S2209.p_SRRM2 Q9UQ35_S2209s _1_1_2209_2209 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30986.30986.3 13.43 13.43 13.426 2 1 1 0 612.3216 1754.9858 S2209s TMT10 2208 (R) MsQVPAPVPLMSLR (T) MS(0.99)QVPAPVPLMS(0.0)LR s:Phosphorylated S SRRM2 300351.7 1 140 2.1 3310.34 HUMAN 1 4.991 10.3783 AGLDDTDSEDELPPG-p Q9NZC7-3;S14-p AGLDDTDSEDELPPG 0.931970571874728 0.178815572886967 0.014 0.137 0.606861052373945 9.83102866341613 0.014 0.137 0.869588714320643 0.103967388106197 0.172131614785382 1.95159454594403 Q9NZC7 WWOX Q9NZC7.3.S14.p_WWOX Q9NZC7-3_T12tS14s_2_2_12_14 Q9NZC7-3 Q9NZC7-2|Q9NZC7-6|Q9NZC7-5|Q9NZC7-7|F5H3R5|Q9NZC7-3 Isoform 3 of WW domain-containing oxidoreductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25186.25397.2 18.2 18.2 9.141 3 2 2 0 1342.0391 2523.1361 T12t S14s TMT10 6 (R) YAGLDDtDsEDELPPGWEER (T) Y(0.0)AGLDDT(0.99)DS(0.99)EDELPPGWEER t:Phosphorylated T,s:Phosphorylated S WWOX 21672.8 2 3 4795.1 26.51 HUMAN 1 0.6069 9.831 AGLGARGSGAAAATV-p Q9UP83-2;S49-p AGLGARGSGAAAATV 0.0729968908063948 0.0128313351438553 0.443333333333333 0.772 24.4560354562876 26.3552330320875 0.443333333333333 0.772 0.00358423481822344 0.00231460398653946 4.90731348835084 5.38820415358 Q9UP83 COG5 Q9UP83.2.S49.p_COG5 Q9UP83-2_S49s _1_1_49_49 Q9UP83-2 Q9UP83-2|Q9UP83-3 Isoform 2 of Conserved oligomeric Golgi complex subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5307.5307.2 14.96 7.02 3.611 2 1 1 0 585.2983 1089.6214 S49s TMT10 48 (R) GsGAAAATVR (E) GS(0.99)GAAAAT(0.0)VR s:Phosphorylated S COG5 95356.1 2 1 4016.1 39.06 HUMAN 1 24.456 26.3552 AGLGHPASPGGSEDG-p Q99856;S77-p AGLGHPASPGGSEDG 0.468420595180194 0.0104377289471877 -0.171666666666667 0.399666666666667 6.08334213818783 27.8069437052723 -0.171666666666667 0.399666666666667 0.246414231249215 0.00165693560159721 -1.29939671277033 5.78335794595567 Q99856 ARID3A Q99856.S77.p_ARID3A Q99856_S77s _1_1_77_77 Q99856 Q99856 AT-rich interactive domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9948.9948.3 20.32 20.32 2.398 3 1 1 0 990.4391 2889.3448 S77s TMT10 67 (R) AAAAGLGHPAsPGGSEDGPPGSEEEDAAR (E) AAAAGLGHPAS(0.99)PGGS(0.0)EDGPPGS(0.0)EEEDAAR s:Phosphorylated S ARID3A 62944.9 1 1 2804.1 70.06 HUMAN 1 -6.0833 27.8069 AGLGPAQTPPYRPGP-p Q9ULL5-3;T224-p AGLGPAQTPPYRPGP 0.813867884017304 0.644248945904196 0.0546666666666666 -0.104333333333333 1.71950718684273 2.60296678272977 0.0546666666666666 -0.104333333333333 0.673053026254989 0.549165595862104 0.44574820169891 -0.638465558818766 Q9ULL5 PRR12 Q9ULL5.3.T224.p_PRR12 Q9ULL5-3_T224t _1_1_224_224 Q9ULL5-3 Q9ULL5-3 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23171.23171.5 22.71 19.93 5.904 2 1 1 0 673.3584 3282.7949 T224t TMT10 208 (R) LAGGGVLGPAGLGPAQtPPYRPGPPDPPPPPR (H) LAGGGVLGPAGLGPAQT(0.99)PPY(0.0)RPGPPDPPPPPR t:Phosphorylated T PRR12 212010 1 1 182.1 477.91 HUMAN 1 1.7195 -2.603 AGLGPGSTPRTASRK-p Q8WUM0;T28-p AGLGPGSTPRTASRK 0.628647939920457 0.0132031691560471 0.071 -0.414666666666667 3.74573548887703 26.1601301719903 0.071 -0.414666666666667 0.422110787449956 0.00242095648181545 0.868203604552289 -5.33666399591465 Q8WUM0 NUP133 Q8WUM0.T28.p_NUP133 Q8WUM0_S27sT28t_2_2_27_28 Q8WUM0 Q8WUM0 Nuclear pore complex protein Nup133 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12136.12136.4 10.29 6.18 9.543 4 2 2 0 535.772 1980.13 S27s T28t TMT10 17 (R) RGPLAGLGPGstPRTASR (K) RGPLAGLGPGS(0.99)T(0.99)PRT(0.0)AS(0.0)R s:Phosphorylated S,t:Phosphorylated T NUP133 130003.6 2 17 652.1 254.15 HUMAN 1 3.7457 -26.1601 AGLGPRRSQQGPRKE-p Q04637-9;S711-p AGLGPRRSQQGPRKE 0.036022948076598 0.00815813217337322 0.659 0.832 33.4224638467205 29.7457043398942 0.659 0.832 0.00045473000876856 0.00106030196438534 7.54488990939044 6.34517968254446 Q04637 EIF4G1 Q04637.9.S711.p_EIF4G1 Q04637-9_S711s _1_1_711_711 Q04637-9 Q04637-9|Q04637-3|Q04637-4|Q04637-5|Q04637-6 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.4215.4215.4 12.25 12.25 99 1 1 1 0 461.496 1762.9986 S711s TMT10 702 (R) GPAGLGPRRsQQGPR (K) GPAGLGPRRS(1.0)QQGPR s:Phosphorylated S EIF4G1 176975.4 8 13 107.1 585.61 HUMAN 1 33.4225 29.7457 AGLILGVSPSAGKAK-p Q9Y5T4;S104-p AGLILGVSPSAGKAK 0.59351749575714 0.00133005405268683 -0.0863333333333333 -1.282 4.18004738561671 46.8283513886629 -0.0863333333333333 -1.282 0.381940103491199 2.07570131823031e-05 -0.951393126550671 -13.6744471224904 Q9Y5T4 DNAJC15 Q9Y5T4.S104.p_DNAJC15 Q9Y5T4_S104s _1_1_104_104 Q9Y5T4 Q9Y5T4 DnaJ homolog subfamily C member 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23250.23250.3 13.56 13.56 4.093 2 1 1 0 613.0126 1757.0573 S104s TMT10 96 (R) EAGLILGVsPSAGK (A) EAGLILGVS(0.99)PS(0.0)AGK K:TMT10,s:Phosphorylated S DNAJC15 16382.7 1 1 6158.1 13.56 HUMAN 1 -4.18 -46.8284 AGLLSDKSENGEAYQ-p Q8N1S5;S153-p AGLLSDKSENGEAYQ 0.329632714614673 0.0470772303717795 0.215 -0.352333333333333 9.00855419522771 17.7560326073747 0.215 -0.352333333333333 0.125644817679723 0.0167647367885187 1.80984367374864 -3.41031387850341 Q8N1S5 SLC39A11 Q8N1S5.S153.p_SLC39A11 Q8N1S5_S153s _1_1_153_153 Q8N1S5 Q8N1S5 Zinc transporter ZIP11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13041.13041.3 11.91 10.56 2.256 3 1 1 0 759.3822 2196.1661 S153s TMT10 146 (R) AGLLSDKsENGEAYQR (K) AGLLS(0.0)DKS(0.99)ENGEAY(0.0)QR K:TMT10,s:Phosphorylated S SLC39A11 35395.4 1 2 4396.1 32.07 HUMAN 1 9.0086 -17.756 AGLQKAYSPTCSPTL-p Q5TGY3;S1399-p AGLQKAYSPTCSPTL 0.855700141839318 0.495492808509443 0.031 0.0696666666666667 1.3165955929388 4.07814199577872 0.031 0.0696666666666667 0.738482895378972 0.391008141618712 0.35151043254388 0.93187723175749 Q5TGY3 AHDC1 Q5TGY3.S1399.p_AHDC1 Q5TGY3_S1399s _1_1_1399_1399 Q5TGY3 Q5TGY3 AT-hook DNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20587.20587.4 18.66 18.66 1.551 6 1 1 0 811.6833 3163.7429 S1399s TMT10 1397 (K) AYsPTCSPTLGFKEELRPPPTK (L) AY(0.0)S(0.99)PT(0.0)CS(0.0)PT(0.0)LGFKEELRPPPT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AHDC1 170057.9 3 15 334.1 355.89 HUMAN 1 1.3166 4.0781 AGLRLRITESEEVVS-p P02545;T64-p AGLRLRITESEEVVS 0.0147380963983692 0.0055384052514299 -0.977666666666667 -0.667333333333333 43.7348778267647 32.7167582656491 -0.977666666666667 -0.667333333333333 4.23167413852406e-05 0.000534963526928661 -11.9770209696498 -7.29026855240403 P02545 LMNA P02545.T64.p_LMNA P02545_T64t _1_1_64_64 P02545 P02545|P02545-3|P02545-6|P02545-2 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14528.14528.3 8.58 8.58 2.495 3 1 1 0 576.3032 1646.9275 T64t TMT10 61 (R) LRItESEEVVSR (E) LRIT(0.99)ES(0.0)EEVVS(0.0)R t:Phosphorylated T LMNA 74423.5 1 6 60.1 706.83 HUMAN 1 -43.7349 -32.7168 AGLSGRASGGAQSPL-p Q6NXT1;S58-p AGLSGRASGGAQSPL 0.480370243746792 0.482282159723259 0.194333333333333 0.067 5.8622087666936 4.22712176304982 0.194333333333333 0.0670000000000001 0.259286033082293 0.377822505508984 1.25997807741575 0.960133239583453 Q6NXT1 ANKRD54 Q6NXT1.S58.p_ANKRD54 Q6NXT1_S58s _1_1_58_58 Q6NXT1 Q6NXT1|D3YTC9 Ankyrin repeat domain-containing protein 54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26713.26713.4 18.73 16.52 1.339 3 1 1 0 722.8682 2808.4743 S58s TMT10 57 (R) AsGGAQSPLRYLHVLWQQDAEPR (D) AS(0.99)GGAQS(0.0)PLRY(0.0)LHVLWQQDAEPR s:Phosphorylated S ANKRD54 32904.3 1 2 3920.1 40.66 HUMAN 1 5.8622 4.2271 AGLTPPATPPHQLWK-p Q5VV67;T1233-p AGLTPPATPPHQLWK 0.036022948076598 0.313720410774928 -0.696333333333333 -0.249666666666667 33.5711421454423 6.65454266297316 -0.696333333333333 -0.249666666666667 0.000439426036155424 0.216045753137969 -7.5966603417906 -1.40002878943121 Q5VV67 PPRC1 Q5VV67.T1233.p_PPRC1 Q5VV67_T1233t_1_1_1233_1233 Q5VV67 Q5VV67|Q5VV67-2|X6R7H2 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29826.29826.3 8.18 8.18 1.362 2 1 1 0 1030.2372 3007.7133 N1224n T1233t TMT10 1217 (R) LQAPELAnVAGLTPPAtPPHQLWK (P) LQAPELAN(1.0)VAGLT(0.0)PPAT(0.99)PPHQLWK K:TMT10,n:Deamidated,t:Phosphorylated T PPRC1 179024.3 2 7 1130.1 174.25 HUMAN 1 -33.5711 -6.6545 AGLTPPLSPPKSVPP-p Q9ULL5-3;S1308-p AGLTPPLSPPKSVPP 0.700515511742099 0.726780930537913 0.065 -0.038 2.90550964279003 1.90687588814881 0.065 -0.038 0.512211158968549 0.644632817535251 0.701154016984649 -0.488023123599735 Q9ULL5 PRR12 Q9ULL5.3.S1308.p_PRR12 Q9ULL5-3_S1308s _1_1_1308_1308 Q9ULL5-3 Q9ULL5-3|Q9ULL5-2 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21179.21179.3 17.14 17.14 1.654 3 1 1 0 784.4378 2271.3265 S1308s TMT10 1295 (R) HPPLYQAGLTPPLsPPK (S) HPPLY(0.0)QAGLT(0.0)PPLS(0.99)PPK K:TMT10,s:Phosphorylated S PRR12 212010 11 16 182.1 477.91 HUMAN 1 2.9055 -1.9069 AGLVQEISFGTTKDK-p P48643;S363-p AGLVQEISFGTTKDK 0.336200474871642 0.301368477994011 -0.195 -0.237 8.82573139797631 6.87785506119834 -0.195 -0.237 0.131046932684544 0.205217547836598 -1.77819664656599 -1.43922429968802 P48643 CCT5 P48643.S363.p_CCT5 P48643_S363s _1_1_363_363 P48643 P48643 T-complex protein 1 subunit epsilon HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35532.35532.3 19.44 19.44 3.949 3 1 1 0 736.0703 2126.2262 S363s TMT10 353 (K) LGFAGLVQEIsFGTTK (D) LGFAGLVQEIS(0.99)FGT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S CCT5 60126.4 1 7 1610.1 127.7 HUMAN 1 -8.8257 -6.8779 AGMKRAMSLNTLNVD-p Q6P597-3;S480-p AGMKRAMSLNTLNVD 0.278130997062813 0.734701910156321 0.181333333333333 -0.0656666666666666 10.5168239208169 1.84596514928155 0.181333333333333 -0.0656666666666666 0.0887805043610228 0.653737631239431 2.07166121380748 -0.474359543581095 Q6P597 KLC3 Q6P597.3.S480.p_KLC3 Q6P597-3_S480s _1_1_480_480 Q6P597-3 Q6P597-3|Q6P597-2 Isoform 3 of Kinesin light chain 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20590.20590.2 16.08 11.12 2.163 2 1 1 0 855.9257 1630.8784 S480s TMT10 478 (R) AMsLNTLNVDAPR (A) AMS(0.99)LNT(0.0)LNVDAPR s:Phosphorylated S KLC3 57077.1 13 2 2702.1 73.48 HUMAN 1 10.5168 -1.846 AGMPVKDSPRKESLL-p Q2LD37;S2287-p AGMPVKDSPRKESLL 0.132087959934017 0.00195162346428314 -0.276666666666667 -0.834 18.1501431625368 42.3836390043402 -0.276666666666667 -0.834 0.0153103699114615 5.77611856838169e-05 -3.49271531596201 -11.2572385875495 Q2LD37 KIAA1109 Q2LD37.S2287.p_KIAA1109 Q2LD37_S2287s _1_1_2287_2287 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7|Q2LD37-6|Q2LD37-2 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8365.8365.3 9.46 5.35 99 1 1 1 0 651.7044 1873.1297 S2287s TMT10 2280 (R) AGMPVKDsPRK (E) AGMPVKDS(1.0)PRK K:TMT10,s:Phosphorylated S KIAA1109 559693.9 3 13 143.1 520.8 HUMAN 1 -18.1501 -42.3836 AGMQPQPSLCSSAMR-p Q13555-8;S417-p AGMQPQPSLCSSAMR 0.55876283968831 0.212381106076791 0.099 0.128333333333333 4.66653477971504 8.85275567748018 0.099 0.128333333333333 0.341465256874544 0.130234015770915 1.04257844686 1.78224481928925 Q13555 CAMK2G Q13555.8.S417.p_CAMK2G Q13555-8_S417s _1_1_417_417 Q13555-8 Q13555-6|A0A0A0MT11|Q13555-8|Q13555-2|Q13555-9|Q13555-7|Q13555-3 Isoform 8 of Calcium/calmodulin-dependent protein kinase type II subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14159.14159.3 17.75 17.75 3.289 5 1 1 0 762.6802 2206.0616 S417s TMT10 406 (R) TAPSAGMQPQPsLCSSAMR (K) T(0.0)APS(0.0)AGMQPQPS(0.99)LCS(0.0)S(0.0)AMR C:Carbamidomethylation,s:Phosphorylated S CAMK2G 62905.2 10 12 1309.1 155.32 HUMAN 1 4.6665 8.8528 AGMSSNQSISSPVLD-p Q9UQ35;S1401-p AGMSSNQSISSPVLD 0.487977822144069 0.575592774769726 0.0923333333333333 -0.056 5.74181386966504 3.23447500454733 0.0923333333333334 -0.056 0.266574505976784 0.474845689036825 1.23843007513892 -0.767534756550953 Q9UQ35 SRRM2 Q9UQ35.S1401.p_SRRM2 Q9UQ35_S1401s _1_1_1401_1401 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21733.21733.3 14.05 14.05 1.986 5 1 1 0 742.3659 2145.1171 S1401s TMT10 1394 (K) AGMSSNQsISSPVLDAVPR (T) AGMS(0.0)S(0.0)NQS(0.99)IS(0.0)S(0.0)PVLDAVPR s:Phosphorylated S SRRM2 300351.7 11 80 2.1 3310.34 HUMAN 1 5.7418 -3.2345 AGNQAYPSLLEAQED-p Q14999-2;S665-p AGNQAYPSLLEAQED 0.0974577541997144 0.0108402391800754 -0.442666666666667 -0.435 21.4228608816803 27.5363116236032 -0.442666666666667 -0.435 0.00720632611571623 0.00176347309313391 -4.19118534150062 -5.70809622101162 Q14999 CUL7 Q14999.2.S665.p_CUL7 Q14999-2_S665s _1_1_665_665 Q14999-2 Q14999-2 Isoform 2 of Cullin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.33251.33251.4 21.61 17.94 4.041 3 1 1 0 1071.3187 4202.2952 S665s TMT10 651 (K) KYGPEALAGNQAYPsLLEAQEDVLLLDAQAQAK (D) KY(0.0)GPEALAGNQAY(0.0)PS(0.99)LLEAQEDVLLLDAQAQAK K:TMT10,s:Phosphorylated S CUL7 201629.3 3 2 2489.1 81.32 HUMAN 1 -21.4229 -27.5363 AGPAPRRSDPLVKSR-p Q8N612-2;S863-p AGPAPRRSDPLVKSR 0.699674004566978 0.047715989518557 0.0716666666666667 -0.273666666666667 2.91410370569966 17.6727042115605 0.0716666666666667 -0.273666666666667 0.511198569000117 0.0170895087517875 0.702911134161494 -3.39361240040441 Q8N612 FAM160A2 Q8N612.2.S863.p_FAM160A2 Q8N612-2_S863s _1_1_863_863 Q8N612-2 Q8N612-2 Isoform 2 of FTS and Hook-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16805.16805.5 7.51 7.51 99 1 1 1 0 631.952 3075.7671 S863s TMT10 846 (R) GKLDWAEGPAAGPAPRRsDPLVK (S) GKLDWAEGPAAGPAPRRS(1.0)DPLVK K:TMT10,s:Phosphorylated S FAM160A2 108162.9 1 5 2416.1 84.39 HUMAN 1 2.9141 -17.6727 AGPLGGSSYEEEEEE-p Q15223;S435-p AGPLGGSSYEEEEEE 0.18863765659071 0.230776669890078 -0.354666666666667 0.118 14.2124745523574 8.38681908072058 -0.354666666666667 0.118 0.0379098917888027 0.144983337161788 -2.73201324377141 1.70163888335148 Q15223 PVRL1 Q15223.S435.p_PVRL1 Q15223_S435s _1_1_435_435 Q15223 Q15223 Nectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11308.11308.3 17.44 17.44 1.123 3 1 1 0 1026.4568 2997.3962 S435s TMT10 427 (K) KAGPLGGSsYEEEEEEEEGGGGGER (K) KAGPLGGS(0.0)S(0.99)Y(0.0)EEEEEEEEGGGGGER K:TMT10,s:Phosphorylated S NECTIN1 57499.4 3 4 885.1 206.68 HUMAN 1 -14.2125 8.3868 AGPPPPPSPSSLGPL-p Q9H0C5-2;S30-p AGPPPPPSPSSLGPL 0.139107365012339 0.108648900663997 -0.507666666666667 -0.181 17.5469020074309 12.7360193925167 -0.507666666666667 -0.181 0.0175917805706512 0.0532596196646226 -3.37114043422809 -2.46228777528677 Q9H0C5 BTBD1 Q9H0C5.2.S30.p_BTBD1 Q9H0C5-2_S30s _1_1_30_30 Q9H0C5-2 Q9H0C5|Q9H0C5-2 Isoform 2 of BTB/POZ domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.36022.36022.5 29.3 29.3 1.305 7 1 1 0 1076.5489 5298.7273 S30s Acetyl 2 (M) ASLGPAAAGEQASGAEAEPGPAGPPPPPsPSSLGPLLPLQREPLYNWQATK (A) AS(0.0)LGPAAAGEQAS(0.0)GAEAEPGPAGPPPPPS(0.99)PS(0.0)S(0.0)LGPLLPLQREPLY(0.0)NWQAT(0.0)K K:TMT10,s:Phosphorylated S BTBD1 42630.2 6 1 3016.1 63.17 HUMAN 1 -17.5469 -12.736 AGPRGGRSPAGASGH-p Q5JVS0;S74-p AGPRGGRSPAGASGH 0.0775649771385732 0.0099286891041713 0.446666666666667 -0.544666666666667 23.7376433952824 28.1622412695438 0.446666666666667 -0.544666666666667 0.00422898028450379 0.00152677792849121 4.7310027506467 -5.8833100275968 Q5JVS0 HABP4 Q5JVS0.S74.p_HABP4 Q5JVS0_S74s _1_1_74_74 Q5JVS0 Q5JVS0|Q5JVS0-2 Intracellular hyaluronan-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.1957.2230.3 10.48 6.57 10.477 2 1 1 0 473.5672 1338.7188 S74s TMT10 71 (R) GGRsPAGASGHR (A) GGRS(0.99)PAGAS(0.0)GHR s:Phosphorylated S HABP4 45898.7 1 2 1699.1 120.32 HUMAN 1 23.7376 -28.1622 AGPSPRQSPRTLRPD-p O43572;S11-p AGPSPRQSPRTLRPD 0.79813572883131 0.269405958771519 -0.075 0.135333333333333 1.88810812711389 7.50134862974496 -0.0750000000000001 0.135333333333333 0.6474245853165 0.177772728048658 -0.483877684258923 1.54805834140065 O43572 AKAP10 O43572.S11.p_AKAP10 O43572_S11s _1_1_11_11 O43572 O43572|E7EMD6|J3QR74|I3L479|I3NI04 A-kinase anchor protein 10, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3245.3245.3 9.67 6.44 4.523 2 1 1 0 473.5755 1338.744 S11s TMT10 3 (R) GAGPSPRQsPR (T) GAGPS(0.0)PRQS(0.99)PR s:Phosphorylated S AKAP10 74273.3 2 1 1844.1 111.39 HUMAN 1 -1.8881 7.5013 AGQEEPGTPPSSPLS-p P13051;T60-p AGQEEPGTPPSSPLS 0.321412916785627 0.000993050805672115 0.181 -1.285 9.22541543074804 52.8381536873377 0.181 -1.285 0.119524918689346 5.20217109013575e-06 1.84739060287502 -17.738256656166 P13051 UNG P13051.T60.p_UNG P13051_T60t _1_1_60_60 P13051 P13051|P13051-2|F5GYA2|Q68DM5 Uracil-DNA glycosylase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14720.14931.3 24.1 19.07 4.609 4 1 1 0 1000.8412 2920.5416 T60t TMT10 50 (K) KAPAGQEEPGtPPSSPLSAEQLDR (I) KAPAGQEEPGT(0.99)PPS(0.0)S(0.0)PLS(0.0)AEQLDR K:TMT10,t:Phosphorylated T UNG 34816 4 4 1324.1 154.1 HUMAN 1 9.2254 -52.8382 AGQERFNSITSAYYR-p Q6IQ22;S106-p AGQERFNSITSAYYR 0.451823780329444 0.502245199934772 -0.0996666666666667 -0.077 6.3681089321282 4.00449584442086 -0.0996666666666667 -0.077 0.230775184467268 0.397695260691619 -1.34988443393719 -0.917833308140657 Q6IQ22 RAB12 Q6IQ22.S106.p_RAB12 Q6IQ22_S106s _1_1_106_106 Q6IQ22 Q6IQ22 Ras-related protein Rab-12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20108.20108.2 10.04 10.04 1.1 5 1 1 0 765.8632 1450.7528 S106s TMT10 104 (R) FNsITSAYYR (S) FNS(0.99)IT(0.0)S(0.0)AY(0.0)Y(0.0)R s:Phosphorylated S RAB12 27590.2 2 2 2925.1 65.79 HUMAN 1 -6.3681 -4.0045 AGQERFQSLGVAFYR-p P51149;S72-p AGQERFQSLGVAFYR 0.297484395551354 0.314185609754785 0.176333333333333 -0.142333333333333 9.90293103277543 6.64646456833024 0.176333333333333 -0.142333333333333 0.102260260970778 0.216447983015552 1.96485108919066 -1.39860839354982 P51149 RAB7A P51149.S72.p_RAB7A P51149_S72s _1_1_72_72 P51149 P51149|C9J8S3 Ras-related protein Rab-7a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26592.26592.3 11.48 11.48 11.481 2 1 1 0 499.5887 1416.7837 S72s TMT10 70 (R) FQsLGVAFYR (G) FQS(0.99)LGVAFY(0.0)R s:Phosphorylated S RAB7A 23774.6 2 2 4165.1 36.4 HUMAN 1 9.9029 -6.6465 AGQERFRSLIPSYIR-p P20340-2;S77-p AGQERFRSLIPSYIR 0.624768233191927 0.225035102654501 -0.0696666666666667 -0.222333333333333 3.79677123306517 8.53118598464836 -0.0696666666666667 -0.222333333333333 0.417179420690365 0.140243067220906 -0.878077311144354 -1.7266204479687 P20340 RAB6A P20340.2.S77.p_RAB6A P20340-2_S77s _1_1_77_77 P20340-2 P20340|P20340-2|Q9NRW1|Q9NRW1-2|P20340-4 Isoform 2 of Ras-related protein Rab-6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24717.24717.3 9.87 9.87 9.867 3 1 1 0 520.9555 1480.8838 S77s TMT10 75 (R) FRsLIPSYIR (D) FRS(0.99)LIPS(0.0)Y(0.0)IR s:Phosphorylated S RAB6A 23662.4 1 4 2158.1 95.2 HUMAN 1 -3.7968 -8.5312 AGQERYHSLAPMYYR-p P51148-2;S118-p AGQERYHSLAPMYYR 0.370734568672993 0.979458516541176 -0.121666666666667 -0.00266666666666661 7.99057224329721 0.128443596463419 -0.121666666666667 -0.00266666666666661 0.158833744929035 0.970857836238617 -1.63352509636403 -0.0382491828885284 P51148 RAB5C P51148.2.S118.p_RAB5C P51148-2_S118s _1_1_118_118 P51148-2 P51148-2|P20339|P61020|P20339-2|P61020-2|K7ERI8 Isoform 2 of Ras-related protein Rab-5C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14781.14781.3 13.91 13.91 13.906 4 1 1 0 537.2525 1529.7772 S118s TMT10 116 (R) YHsLAPMYYR (G) Y(0.0)HS(0.99)LAPMY(0.0)Y(0.0)R s:Phosphorylated S RAB5C 27263.3 2 3 2563.1 78.41 HUMAN 1 -7.9906 -0.1284 AGQKLSESPASLPSC-p Q2TAZ0;S1263-p AGQKLSESPASLPSC 0.0752189965096595 0.0182244938667557 -0.449666666666667 -0.410333333333333 24.0478173897615 23.940869626218 -0.449666666666667 -0.410333333333333 0.00393747909492142 0.00403564575575377 -4.80659057608586 -4.77480366389746 Q2TAZ0 ATG2A Q2TAZ0.S1263.p_ATG2A Q2TAZ0_S1263s _1_1_1263_1263 Q2TAZ0 Q2TAZ0 Autophagy-related protein 2 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25393.25393.2 15.8 15.8 1.317 5 1 1 0 1338.168 2595.365 S1263s TMT10 1260 (K) LSEsPASLPSCPPVETALINQR (D) LS(0.0)ES(0.99)PAS(0.0)LPS(0.0)CPPVET(0.0)ALINQR C:Carbamidomethylation,s:Phosphorylated S ATG2A 215024.3 6 1 2029.2 101.69 HUMAN 1 -24.0478 -23.9409 AGRALIRSPSLAKQS-p Q5SW96;S14-p AGRALIRSPSLAKQS 0.901405812765465 0.0278103949284871 0.0253333333333333 -0.298333333333333 0.884702065360928 21.0857801289741 0.0253333333333334 -0.298333333333333 0.815698743767084 0.00778792906378917 0.244701734239144 -4.11182575711719 Q5SW96 LDLRAP1 Q5SW96.S14.p_LDLRAP1 Q5SW96_S14s _1_1_14_14 Q5SW96 Q5SW96 Low density lipoprotein receptor adapter protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14963.14963.3 11.63 5.55 2.6 2 1 1 0 531.9885 1513.983 S14s TMT10 10 (R) ALIRsPSLAK (Q) ALIRS(0.99)PS(0.0)LAK K:TMT10,s:Phosphorylated S LDLRAP1 34170.1 3 1 4304.1 33.98 HUMAN 1 0.8847 -21.0858 AGRAMTLSPQEEVAA-p Q9Y6A5;S317-p AGRAMTLSPQEEVAA 0.28377835512685 0.134556648414693 0.187 -0.166666666666667 10.3224208232141 11.4812941680049 0.187 -0.166666666666667 0.0928448711140687 0.0711001608440368 2.03778588975211 -2.23959261853621 Q9Y6A5 TACC3 Q9Y6A5.S317.p_TACC3 Q9Y6A5_S317s_1_1_317_317 Q9Y6A5 Q9Y6A5 Transforming acidic coiled-coil-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14961.14961.3 18.52 18.52 2.391 5 1 1 0 792.6967 2280.1161 M314m S317s TMT10 313 (R) AmTLsPQEEVAAGQMASSSR (S) AM(0.99)T(0.0)LS(0.99)PQEEVAAGQM(0.0)AS(0.0)S(0.0)S(0.0)R m:Oxidized methionine,s:Phosphorylated S TACC3 91213.8 7 6 1278.1 159 HUMAN 1 10.3224 -11.4813 AGRARGGSPAPLPAK-p Q9NZM4;S1413-p AGRARGGSPAPLPAK 0.127628882978128 0.908286687383269 0.380333333333333 -0.018 18.5356615585268 0.585403782578163 0.380333333333333 -0.018 0.0140098615719167 0.873895738903664 3.57149580587366 -0.166367637860914 Q9NZM4 GLTSCR1 Q9NZM4.S1413.p_GLTSCR1 Q9NZM4_S1413s _1_1_1413_1413 Q9NZM4 Q9NZM4|A0A087WWH3|Q9NZM4-2 BRD4-interacting chromatin-remodeling complex-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23484.23484.3 12.36 11.29 11.295 3 1 1 0 749.0656 2165.2127 S1413s Hydrogen 1411 (R) GGsPAPLPAKVDEATSGLIR (E) GGS(0.99)PAPLPAKVDEAT(0.0)S(0.0)GLIR K:TMT10-Lys-Only,s:Phosphorylated S BICRA 158829.7 2 5 2101.1 97.63 HUMAN 1 18.5357 -0.5854 AGRARRVSGEPQQSG-p Q96NY7;S293-p AGRARRVSGEPQQSG 0.959595786052306 0.378111576694332 -0.00933333333333334 0.128666666666667 0.346770556977929 5.61071483625949 -0.00933333333333335 0.128666666666667 0.923257712614178 0.274744189482835 -0.100907008459266 1.21461964044169 Q96NY7 CLIC6 Q96NY7.S293.p_CLIC6 Q96NY7_S293s _1_1_293_293 Q96NY7 Q96NY7|Q96NY7-2 Chloride intracellular channel protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18771.18771.3 25.18 25.18 1.316 5 1 1 0 1117.201 3269.6196 S293s TMT10 291 (R) RVsGEPQQSGDGSLSPQAEAIEVAAGESAGR (S) RVS(0.99)GEPQQS(0.0)GDGS(0.0)LS(0.0)PQAEAIEVAAGES(0.0)AGR s:Phosphorylated S CLIC6 73238.4 9 2 1280.1 158.88 HUMAN 1 -0.3468 5.6107 AGRGEDRSPPTAL__-p Q9BUB5;S460-p AGRGEDRSPPTAL__ 0.300657590513664 0.0247309816796438 0.144666666666667 -0.337 9.80096071120484 21.8650248042542 0.144666666666667 -0.337 0.104689693634252 0.00650874893429054 1.94715037570011 -4.2866348271841 Q9BUB5 MKNK1 Q9BUB5.S460.p_MKNK1 Q9BUB5_S460s _1_1_460_460 Q9BUB5 Q9BUB5|Q9BUB5-2|Q7Z319 MAP kinase-interacting serine/threonine-protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11584.11584.3 8.76 5.41 8.763 2 1 1 0 673.6796 1939.0559 S460s TMT10 449 (R) ALAQAGRGEDRsPPTAL (-) ALAQAGRGEDRS(0.99)PPT(0.0)AL s:Phosphorylated S MKNK1 52083.2 1 7 1937.1 106.18 HUMAN 1 9.801 -21.865 AGRLRSFSMQDLRSI-p Q9H6H4;S152-p AGRLRSFSMQDLRSI 0.378389324662461 0.18279092440949 0.142666666666667 -0.184666666666667 7.79868830658393 9.70857529273182 0.142666666666667 -0.184666666666667 0.166008822580149 0.106940564124542 1.60021786612107 -1.93036640033423 Q9H6H4 REEP4 Q9H6H4.S152.p_REEP4 Q9H6H4_S152s _1_1_152_152 Q9H6H4 Q9H6H4|E5RGS2 Receptor expression-enhancing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17459.17667.2 10.99 5.43 2.819 2 1 1 0 646.7994 1212.6244 S152s TMT10 150 (R) SFsMQDLR (S) S(0.0)FS(0.99)MQDLR s:Phosphorylated S REEP4 29565.8 7 2 1742.1 118.21 HUMAN 1 7.7987 -9.7086 AGRPASASPAPNANA-p Q6W2J9;S571-p AGRPASASPAPNANA 0.693213743392238 0.54025572841173 -0.059 -0.0663333333333333 2.98550620881052 3.59730576771353 -0.059 -0.0663333333333333 0.502862649324105 0.43678671754358 -0.717466906210133 -0.8391946356922 Q6W2J9 BCOR Q6W2J9.S571.p_BCOR Q6W2J9_S569sS571s_2_2_569_571 Q6W2J9 Q6W2J9|Q6W2J9-2|Q6W2J9-4|Q6W2J9-3 BCL-6 corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20091.20091.4 14.5 14.5 1.303 9 2 2 0 984.2165 3773.9129 S569s S571s TMT10 547 (R) MGGTDAVITNVSGSVSSAGRPAsAsPAPNANADGTK (T) MGGT(0.0)DAVIT(0.0)NVS(0.0)GS(0.0)VS(0.0)S(0.0)AGRPAS(0.99)AS(0.99)PAPNANADGT(0.0)K K:TMT10,s:Phosphorylated S BCOR 193725.6 5 14 459.1 305.76 HUMAN 1 -2.9855 -3.5973 AGRPLELSDFRMEES-p P42167;S378-p AGRPLELSDFRMEES 0.395180197518809 0.0572289522546229 -0.115333333333333 -0.244 7.4410494362519 16.5536877261416 -0.115333333333333 -0.244 0.180258210935469 0.0221121630139724 -1.53801686413012 -3.17290057708796 P42167 TMPO P42167.S378.p_TMPO P42167_S378s _1_1_378_378 P42167 P42167|G5E972|P42167-2 Lamina-associated polypeptide 2, isoforms beta/gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21855.21855.4 14.7 10.2 1.932 4 1 1 0 713.8566 2772.4391 S378s TMT10 369 (K) GAAGRPLELsDFRMEESFSSK (Y) GAAGRPLELS(0.99)DFRMEES(0.0)FS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S TMPO 50726.4 6 42 123.2 546.19 HUMAN 1 -7.441 -16.5537 AGRPVDASPRVPGGS-p Q9Y6G9;S398-p AGRPVDASPRVPGGS 0.763094407024719 0.694061631241037 0.0456666666666667 -0.0526666666666666 2.25004080070297 2.17780652855905 0.0456666666666667 -0.0526666666666666 0.59565654748277 0.605646688745352 0.563489970867926 -0.547762456047299 Q9Y6G9 DYNC1LI1 Q9Y6G9.S398.p_DYNC1LI1 Q9Y6G9_S398s _1_1_398_398 Q9Y6G9 Q9Y6G9|E9PHI6 Cytoplasmic dynein 1 light intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6035.6035.3 11.12 6.8 5.402 2 1 1 0 610.3152 1748.9605 S398s TMT10 386 (K) QPPTAAGRPVDAsPR (V) QPPT(0.0)AAGRPVDAS(0.99)PR s:Phosphorylated S DYNC1LI1 56863.4 4 7 510.1 287.75 HUMAN 1 2.25 -2.1778 AGRRFIVSPVPESRL-p Q9H4A3-7;S1674-p AGRRFIVSPVPESRL 0.719995318616615 0.40284088560906 -0.0696666666666667 -0.0983333333333333 2.69274833188466 5.25206552304957 -0.0696666666666667 -0.0983333333333333 0.537929258728417 0.298396309582407 -0.657283920012032 -1.14981383173015 Q9H4A3 WNK1 Q9H4A3.7.S1674.p_WNK1 Q9H4A3-7_S1674s _1_1_1674_1674 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2|F5GWT4 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20504.20504.2 14.73 14.73 3.274 2 1 1 0 720.3803 1359.7834 S1674s TMT10 1671 (R) FIVsPVPESR (L) FIVS(0.99)PVPES(0.0)R s:Phosphorylated S WNK1 301202.7 3 13 162.1 495.27 HUMAN 1 -2.6927 -5.2521 AGRRGAASPVPPPLV-p Q4G0W2;S13-p AGRRGAASPVPPPLV 0.342628074928273 0.0332353239010211 0.155333333333333 0.300333333333333 8.64034135336994 19.9338055771593 0.155333333333333 0.300333333333333 0.136762132699398 0.0101535857820715 1.74610471507831 3.86116092208309 Q4G0W2 DUSP28 Q4G0W2.S13.p_DUSP28 Q4G0W2_S13s _1_1_13_13 Q4G0W2 Q4G0W2 Dual specificity phosphatase 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15867.15867.2 12.73 12.73 99 1 1 1 0 735.4094 1389.8416 S13s TMT10 10 (R) GAAsPVPPPLVR (V) GAAS(1.0)PVPPPLVR s:Phosphorylated S DUSP28 18666.1 1 1 6268.1 12.73 HUMAN 1 8.6403 19.9338 AGRTPGRTPGKSSSK-p Q12834;T59-p AGRTPGRTPGKSSSK 0.525095378197465 0.00110621338012195 0.261 -1.88433333333333 5.17693168494891 49.7516895425646 0.261 -1.88433333333333 0.303603540281865 1.05884172220254e-05 1.13638511438267 -15.5244592971235 Q12834 CDC20 Q12834.T59.p_CDC20 Q12834_T59t _1_1_59_59 Q12834 Q12834 Cell division cycle protein 20 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4355.4355.3 10.24 5.86 4.082 2 1 1 0 451.2544 1271.7836 T59t TMT10 55 (R) TPGRtPGK (S) T(0.0)PGRT(0.99)PGK K:TMT10,t:Phosphorylated T CDC20 55121 1 2 2388.1 85.57 HUMAN 1 5.1769 -49.7517 AGRVRAGSLQLSSMS-p Q53SF7;S382-p AGRVRAGSLQLSSMS 0.487566830417498 0.0961721818525129 -0.125666666666667 -0.259666666666667 5.74950098320477 13.4468465804469 -0.125666666666667 -0.259666666666667 0.266103080229187 0.045218415688114 -1.23980782479801 -2.5904266190813 Q53SF7 COBLL1 Q53SF7.S382.p_COBLL1 Q53SF7_S382s _1_1_382_382 Q53SF7 A0A0D9SG04|Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4|A0A0B4J1Z0 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17849.17849.3 15.26 15.26 5.902 6 1 1 0 658.9893 1894.9854 S382s TMT10 380 (R) AGsLQLSSMSAGNSSLR (R) AGS(0.99)LQLS(0.0)S(0.0)MS(0.0)AGNS(0.0)S(0.0)LR s:Phosphorylated S COBLL1 132526.1 6 12 163.1 494.83 HUMAN 1 -5.7495 -13.4468 AGSARSFSPKSPLEL-p Q15742;S159-p AGSARSFSPKSPLEL 0.114016248333261 0.812289893223742 0.345333333333333 -0.0413333333333333 19.6562938060336 1.26614559434175 0.345333333333333 -0.0413333333333333 0.0108235722221656 0.747111532990463 3.80557250620268 -0.339332692721015 Q15742 NAB2 Q15742.S159.p_NAB2 Q15742_S159s _1_1_159_159 Q15742 Q15742|Q15742-3|Q15742-2 NGFI-A-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21592.21592.3 11.13 11.13 2.198 3 1 1 0 729.4087 2106.2414 S159s TMT10 157 (R) SFsPKSPLELGEK (L) S(0.0)FS(0.99)PKS(0.0)PLELGEK K:TMT10,s:Phosphorylated S NAB2 56878.4 2 3 983.1 192.11 HUMAN 1 19.6563 -1.2661 AGSEEISSEDDELVE-p Q9NY61;S321-p AGSEEISSEDDELVE 0.778321298351263 0.236220025185224 -0.0476666666666667 0.131666666666667 2.09071654715695 8.25261219603577 -0.0476666666666667 0.131666666666667 0.61791444135635 0.149533597032438 -0.52879944581005 1.6784062188061 Q9NY61 AATF Q9NY61.S321.p_AATF Q9NY61_S316sS320sS321s_3_3_316_321 Q9NY61 Q9NY61 Protein AATF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22851.23267.5 16.95 16.95 5.84 5 3 3 0 828.3998 3898.0627 S316s S320s S321s TMT10 305 (R) YLVDGTKPNAGsEEIssEDDELVEEKK (Q) Y(0.0)LVDGT(0.0)KPNAGS(0.99)EEIS(0.99)S(0.99)EDDELVEEKK K:TMT10,s:Phosphorylated S AATF 63245.9 10 6 2183.1 94.22 HUMAN 1 -2.0907 8.2526 AGSERGLSGEEEDDE-p Q6P158;S132-p AGSERGLSGEEEDDE 0.858622133530788 0.208528833424842 -0.0283333333333333 0.205333333333333 1.29028911107712 8.95703946823193 -0.0283333333333333 0.205333333333333 0.742969676546802 0.127144053514489 -0.34518886078909 1.80028183222902 Q6P158 DHX57 Q6P158.S132.p_DHX57 Q6P158_S132s _1_1_132_132 Q6P158 Q6P158|Q6P158-2|A0A087WZ11|Q6P158-3 Putative ATP-dependent RNA helicase DHX57 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7933.7933.3 14.47 14.47 99 1 1 1 0 812.3009 2354.9186 S132s TMT10 130 (R) GLsGEEEDDEPDCCNDER (Y) GLS(1.0)GEEEDDEPDCCNDER C:Carbamidomethylation,s:Phosphorylated S DHX57 157199 1 2 2406.1 84.87 HUMAN 1 -1.2903 8.957 AGSFTGTSDPEAAPA-p J3KQR7;S1185-p AGSFTGTSDPEAAPA 0.874041515701776 0.00663556839811996 -0.0483333333333333 0.486666666666667 1.1443127836959 31.2975155892939 -0.0483333333333334 0.486666666666667 0.768367030462664 0.000741734434115037 -0.309696059965606 6.8253780400916 J3KQR7 NotFound J3KQR7.S1185.p_NotFound J3KQR7_S1185s _1_1_1185_1185 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7152.7152.3 14.69 11.93 1.405 4 1 1 0 667.3197 1919.9773 S1185s TMT10 1177 (K) RAGSFTGTsDPEAAPAR (T) RAGS(0.0)FT(0.0)GT(0.0)S(0.99)DPEAAPAR s:Phosphorylated S CEP170B 172326.6 1 28 51.1 746.11 HUMAN 1 -1.1443 31.2975 AGSGSKGSAGGGSKR-p A7E2V4-4;S598-p AGSGSKGSAGGGSKR 0.227686366335366 0.443909098364399 -0.212 0.0763333333333334 12.358507429297 4.69639943079648 -0.212 0.0763333333333334 0.0580964047257184 0.339125195333775 -2.39609002997241 1.04791496517124 A7E2V4 ZSWIM8 A7E2V4.4.S598.p_ZSWIM8 A7E2V4-4_S598s _1_1_598_598 A7E2V4-4 A7E2V4-2|A7E2V4-4|A7E2V4-3|S4R410|A7E2V4-5|S4R393|S4R3H3|H7BZ52 Isoform 4 of Zinc finger SWIM domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7794.7794.3 13.69 8 1.291 4 1 1 0 725.059 2093.1918 S598s TMT10 587 (K) ALGGAGSGSKGsAGGGSK (R) ALGGAGS(0.0)GS(0.0)KGS(0.99)AGGGS(0.0)K K:TMT10,s:Phosphorylated S ZSWIM8 199945.4 1 7 805.1 222.5 HUMAN 1 -12.3585 4.6964 AGSHGRRSPGGGSEA-p O95049-3;S183-p AGSHGRRSPGGGSEA 0.891075321284627 0.908748069556512 0.022 0.0176666666666667 0.977709590640174 0.582292354115108 0.022 0.0176666666666667 0.798415649684665 0.874522050872895 0.268277728912475 0.165532360355466 O95049 TJP3 O95049.3.S183.p_TJP3 O95049-3_S183s_1_1_183_183 O95049-3 O95049|O95049-5|O95049-3|O95049-4 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27945.28397.3 26.34 26.34 4.454 3 1 1 0 729.7082 2106.1595 S183s N191n TMT10 183 (R) sPGGGSEAnGLALVSGFK (R) S(0.99)PGGGS(0.0)EAN(1.0)GLALVS(0.0)GFK K:TMT10,s:Phosphorylated S,n:Deamidated TJP3 103593.6 54 2 125.1 544.41 HUMAN 1 0.9777 0.5823 AGSISKNSPATLFEV-p O95453;S628-p AGSISKNSPATLFEV 0.21671898036419 0.0144533398599366 0.194666666666667 0.360666666666667 12.7991863831261 25.5044824924903 0.194666666666667 0.360666666666667 0.0524905788048608 0.00281547548863406 2.47494357077607 5.1660737628234 O95453 PARN O95453.S628.p_PARN O95453_S628s _1_1_628_628 O95453 O95453|O95453-3|O95453-2|O95453-4 Poly(A)-specific ribonuclease PARN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36508.36508.2 17.17 17.17 1.672 3 1 1 0 893.4192 1705.8635 S628s TMT10 627 (K) NsPATLFEVPDTW (-) NS(0.99)PAT(0.0)LFEVPDT(0.0)W s:Phosphorylated S PARN 73963.1 7 10 320.1 365.2 HUMAN 1 12.7992 25.5045 AGSISPGSPPYPQSR-p Q63HR2-4;S845-p AGSISPGSPPYPQSR 0.811315890480316 0.304587015532339 -0.0353333333333333 -0.129 1.74518195480899 6.81836342388169 -0.0353333333333333 -0.129 0.669085787010211 0.208048053848778 -0.451600889049719 -1.42879518938611 Q63HR2 TNS2 Q63HR2.4.S845.p_TNS2 Q63HR2-4_S845s _1_1_845_845 Q63HR2-4 Q63HR2-4|Q63HR2-6|Q63HR2-5 Isoform 4 of Tensin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11986.12191.2 18.75 14.78 1.629 5 1 1 0 905.4393 1729.9071 S845s TMT10 838 (R) AGSISPGsPPYPQSR (K) AGS(0.0)IS(0.0)PGS(0.99)PPY(0.0)PQS(0.0)R s:Phosphorylated S TNS2 155500.6 5 7 453.1 308.04 HUMAN 1 -1.7452 -6.8184 AGSKQHESIPGKAKK-p Q9GZP8;S78-p AGSKQHESIPGKAKK 0.657493781284077 0.721797268098392 -0.0796666666666667 0.0473333333333334 3.41585484998026 1.95125058929671 -0.0796666666666667 0.0473333333333334 0.455422533573187 0.638079719045572 -0.803682337917157 0.49792156668316 Q9GZP8 C19orf33 Q9GZP8.S78.p_C19orf33 Q9GZP8_S78s _1_1_78_78 Q9GZP8 Q9GZP8 Immortalization up-regulated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7223.7223.3 10.88 6.84 99 1 1 1 0 478.5902 1353.7891 S78s TMT10 75 (K) QHEsIPGK (A) QHES(1.0)IPGK K:TMT10,s:Phosphorylated S IMUP 10896.9 2 2 2484.1 81.7 HUMAN 1 -3.4159 1.9513 AGSLASLSDAPPLKS-p O95684;S284-p AGSLASLSDAPPLKS 0.360685521242056 0.0629095680996146 0.232333333333333 -0.339 8.23313909563726 15.9916005152087 0.232333333333333 -0.339 0.150205588240284 0.0251674925357524 1.67558163055837 -3.06441376748535 O95684 FGFR1OP O95684.S284.p_FGFR1OP O95684_S284s _1_1_284_284 O95684 O95684 FGFR1 oncogene partner HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21970.21970.3 16.18 9.55 1.162 3 1 1 0 665.032 1913.1108 S284s TMT10 276 (K) QAGSLASLsDAPPLK (S) QAGS(0.0)LAS(0.0)LS(0.99)DAPPLK K:TMT10,s:Phosphorylated S FGFR1OP 43178.2 1 7 1485.1 137.99 HUMAN 1 8.2331 -15.9916 AGSNTPGSIRRYSLG-p Q14D04;S425-p AGSNTPGSIRRYSLG 0.799316811191766 0.630571344120619 -0.0406666666666667 0.0656666666666667 1.87435441936464 2.72266356739497 -0.0406666666666667 0.0656666666666667 0.649478169613083 0.534236606750492 -0.48079356600807 0.663408079182359 Q14D04 VEPH1 Q14D04.S425.p_VEPH1 Q14D04_T422tS425s_2_2_422_425 Q14D04 Q14D04|Q14D04-2 Ventricular zone-expressed PH domain-containing protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7860.7860.3 8.35 8.35 2.365 3 2 2 0 577.944 1571.8815 T422t S425s TMT10 416 (K) INAGSNtPGsIRR (Y) INAGS(0.0)NT(0.99)PGS(0.99)IRR t:Phosphorylated T,s:Phosphorylated S VEPH1 95542.4 2 13 341.1 353.64 HUMAN 1 -1.8744 2.7227 AGSQRAPSAKKPSTG-p Q15021;S1315-p AGSQRAPSAKKPSTG 0.704621657780675 0.00529397314454849 0.0586666666666667 -0.985 2.85843228230654 33.0746203810692 0.0586666666666667 -0.985 0.517793711568189 0.000492649404192944 0.691508637751028 -7.41157921244865 Q15021 NCAPD2 Q15021.S1315.p_NCAPD2 Q15021_S1315s _1_1_1315_1315 Q15021 Q15021 Condensin complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12355.12355.3 14.35 14.35 2.239 2 1 1 0 727.3884 2100.1813 S1315s TMT10 1302 (K) ELEIGQAGSQRAPsAK (K) ELEIGQAGS(0.0)QRAPS(0.99)AK K:TMT10,s:Phosphorylated S NCAPD2 158605.7 3 6 1192.1 168.06 HUMAN 1 2.8584 -33.0746 AGSRAGRSFSSRLQD-p Q96GS4;S158-p AGSRAGRSFSSRLQD 0.89475489966855 0.522504761726917 0.0243333333333333 -0.0703333333333333 0.945315594161935 3.78733918468006 0.0243333333333333 -0.0703333333333333 0.80439329258235 0.418086439457466 0.260104604932741 -0.876111912729698 Q96GS4 BORCS6 Q96GS4.S158.p_BORCS6 Q96GS4_S158s _1_1_158_158 Q96GS4 Q96GS4 BLOC-1-related complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3711.3711.3 11.12 11.12 2.382 3 1 1 0 392.8622 1096.6061 S158s TMT10 155 (R) AGRsFSSR (L) AGRS(0.99)FS(0.0)S(0.0)R s:Phosphorylated S BORCS6 37625 1 2 1264.1 160.44 HUMAN 1 0.9453 -3.7873 AGSRRRFSDSEGEET-p Q13286;S12-p AGSRRRFSDSEGEET 0.170192178771539 0.120297291769479 0.220333333333333 0.276 15.3495310120635 12.1266294922103 0.220333333333333 0.276 0.0291774207947212 0.0612825814037286 2.94426670599837 2.35362646831101 Q13286 CLN3 Q13286.S12.p_CLN3 Q13286_S12s _1_1_12_12 Q13286 Q13286|Q13286-3|Q13286-7|Q13286-4|Q13286-5|Q9UBD8|H3BR00|Q9UP10|Q9UBH5|A0A1B0GWD3|Q13286-2|A0A1B0GV71|A0A1B0GW34|A0A0D9SFH9|Q13286-6|A0A0D9SF04|A0A1B0GWH8 Battenin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10504.10504.3 18.22 18.22 1.103 3 1 1 0 681.9801 1963.9559 S12s TMT10 10 (R) RFsDSEGEETVPEPR (L) RFS(0.99)DS(0.0)EGEET(0.0)VPEPR s:Phosphorylated S CLN3 48192.6 5 1 4018.1 39.04 HUMAN 1 15.3495 12.1266 AGSTDENTDSEEHQE-p P18887;T523-p AGSTDENTDSEEHQE 0.141585108983502 0.1687229306464 0.261 0.155333333333333 17.3450559149753 10.164924562667 0.261 0.155333333333333 0.0184286876206888 0.0962736735649754 3.33090855894077 2.00955082186832 P18887 XRCC1 P18887.T523.p_XRCC1 P18887_T523tS525s_2_2_523_525 P18887 P18887|F5H8D7 DNA repair protein XRCC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.31829.31829.5 9.73 9.73 1.191 5 2 2 0 1095.0815 5309.4599 N510n N522n T523t S525s TMT10 503 (R) LPPGQEEnGEDPYAGSTDEntDsEEHQEPPDLPVPELPDFFQGK (H) LPPGQEEN(1.0)GEDPY(0.0)AGS(0.0)T(0.0)DEN(1.0)T(0.99)DS(0.99)EEHQEPPDLPVPELPDFFQGK K:TMT10,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S XRCC1 69817.6 6 18 433.1 315.31 HUMAN 1 17.3451 10.1649 AGSVGCCSERQEEDG-p Q02487;S873-p AGSVGCCSERQEEDG 0.766667060694937 0.0980361613051699 -0.0506666666666667 -0.255666666666667 2.2119100342697 13.3335981631145 -0.0506666666666667 -0.255666666666667 0.60090939841805 0.0464130580135508 -0.555235913064268 -2.56990341117599 Q02487 DSC2 Q02487.S873.p_DSC2 Q02487_S873s _1_1_873_873 Q02487 Q02487 Desmocollin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27477.27477.4 21.77 16.88 2.142 3 1 1 0 905.9219 3540.6987 S873s TMT10 863 (R) GSVAGSVGCCsERQEEDGLEFLDNLEPK (F) GS(0.0)VAGS(0.0)VGCCS(0.99)ERQEEDGLEFLDNLEPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DSC2 101386.2 4 2 3326.1 53.88 HUMAN 1 -2.2119 -13.3336 AGTFGPGS_______-p Q9Y296;S219-p AGTFGPGS_______ 0.681351208373412 0.108817040754185 -0.088 -0.196 3.12598005041607 12.7267234943039 -0.0880000000000001 -0.196 0.486857646063092 0.0533737418256615 -0.745886146440889 -2.46062234338111 Q9Y296 TRAPPC4 Q9Y296.S219.p_TRAPPC4 Q9Y296_S219s _1_1_219_219 Q9Y296 Q9Y296|J3KP27 Trafficking protein particle complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11639.11639.2 14.83 14.83 14.83 2 1 1 0 501.7282 922.4832 S219s TMT10 212 (K) AGTFGPGs (-) AGT(0.0)FGPGS(0.99) s:Phosphorylated S TRAPPC4 24453.7 1 2 4564.1 29.76 HUMAN 1 -3.126 -12.7267 AGTGGTGSPQASLEI-p Q9Y2J4-4;S108-p AGTGGTGSPQASLEI 0.226020504051516 0.396241901212597 0.189333333333333 0.081 12.3996162301318 5.34532215588572 0.189333333333333 0.081 0.0575490789069252 0.292057110673616 2.40342259693406 1.16673069223098 Q9Y2J4 AMOTL2 Q9Y2J4.4.S108.p_AMOTL2 Q9Y2J4-4_S108s _1_1_108_108 Q9Y2J4-4 Q9Y2J4-4|Q9Y2J4-2|Q9Y2J4-3 Isoform 4 of Angiomotin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26871.26871.3 25.69 22.57 2.212 6 1 1 0 1102.5439 3225.6549 S108s TMT10 99 (R) GGAGTGGTGsPQASLEILAPEDSQVLQQATR (Q) GGAGT(0.0)GGT(0.0)GS(0.99)PQAS(0.0)LEILAPEDS(0.0)QVLQQAT(0.0)R s:Phosphorylated S AMOTL2 92272.2 3 1 849.1 212.62 HUMAN 1 12.3996 5.3453 AGTPRAESPMSRQEK-p Q6ZUT6;S55-p AGTPRAESPMSRQEK 0.636657897799904 0.945758152567333 0.07 -0.01 3.65834821237877 0.349053666808306 0.07 -0.00999999999999998 0.430690387331888 0.922772478544305 0.851231922622192 -0.101538265247765 Q6ZUT6 C15orf52 Q6ZUT6.S55.p_C15orf52 Q6ZUT6_S55s _1_1_55_55 Q6ZUT6 Q6ZUT6 Uncharacterized protein C15orf52 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5120.5120.2 10.93 5.5 1.787 2 1 1 0 543.746 1006.5189 S55s TMT10 53 (R) AEsPMSR (Q) AES(0.99)PMS(0.0)R s:Phosphorylated S C15orf52 57837.4 2 1 3122.1 60.24 HUMAN 1 3.6583 -0.3491 AGVEELESENKIPAT-p O75506;S66-p AGVEELESENKIPAT 0.496616195264082 0.0716718862983929 -0.094 -0.225 5.59841157887592 15.2145265663148 -0.094 -0.225 0.275523623978695 0.03009867263045 -1.21267803957487 -2.91684663812927 O75506 HSBP1 O75506.S66.p_HSBP1 O75506_S66s _1_1_66_66 O75506 O75506 Heat shock factor-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29546.29546.4 18.27 14.07 5.483 4 1 1 0 896.7156 3503.887 S66s TMT10 51 (K) NIADLMTQAGVEELEsENKIPATQKS (-) NIADLMT(0.0)QAGVEELES(0.99)ENKIPAT(0.0)QKS(0.0) K:TMT10,s:Phosphorylated S HSBP1 8543.4 2 1 4974.1 24.4 HUMAN 1 -5.5984 -15.2145 AGVEQPPSPELRQEG-p Q9Y468-5;S117-p AGVEQPPSPELRQEG 0.450792703794699 0.0168671644355801 0.15 0.4 6.38866443536231 24.4663467796228 0.15 0.4 0.229685488009323 0.0035757349716944 1.35351792583173 4.90392511650694 Q9Y468 L3MBTL1 Q9Y468.5.S117.p_L3MBTL1 Q9Y468-5_S117s _1_1_117_117 Q9Y468-5 Q9Y468-5|Q9Y468-1|A0A0A0MRR4|Q9Y468-2 Isoform 5 of Lethal(3)malignant brain tumor-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23103.23103.3 19.36 19.36 19.356 3 1 1 0 965.1705 2813.5272 S117s TMT10 101 (R) ISEYKPLNMAGVEQPPsPELR (Q) IS(0.0)EY(0.0)KPLNMAGVEQPPS(0.99)PELR K:TMT10,s:Phosphorylated S L3MBTL1 93664.7 2 1 5432.1 19.36 HUMAN 1 6.3887 24.4663 AGVMITASHNRKEDN-p Q6PCE3;S175-p AGVMITASHNRKEDN 0.552196582768395 0.048358971768716 0.0806666666666667 0.241333333333333 4.75979304101032 17.5936032519626 0.0806666666666667 0.241333333333333 0.334210966158897 0.0174036233140174 1.05984925154693 3.37779337856242 Q6PCE3 PGM2L1 Q6PCE3.S175.p_PGM2L1 Q6PCE3_S175s _1_1_175_175 Q6PCE3 Q6PCE3 Glucose 1,6-bisphosphate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11883.11883.2 15.86 15.45 1.145 2 1 1 0 818.4169 1555.8576 S175s TMT10 166 (K) AVAGVMITAsHNR (K) AVAGVMIT(0.0)AS(0.99)HNR s:Phosphorylated S PGM2L1 71410.3 11 1 3904.1 41.02 HUMAN 1 4.7598 17.5936 AGVPLEASGEQVRLQ-p J3KQR7;S381-p AGVPLEASGEQVRLQ 0.155951374004008 0.123619829174677 -0.367 -0.169 16.2207092204692 11.9789586864883 -0.367 -0.169 0.0238742137550243 0.0634021713241799 -3.11068426981598 -2.32744410051719 J3KQR7 NotFound J3KQR7.S381.p_NotFound J3KQR7_S381s _1_1_381_381 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14245.14245.3 8.89 8.89 8.89 2 1 1 0 641.3248 1841.9919 S381s TMT10 370 (K) AASAAGVPLEAsGEQVR (L) AAS(0.0)AAGVPLEAS(0.99)GEQVR s:Phosphorylated S CEP170B 172326.6 1 4 51.1 746.11 HUMAN 1 -16.2207 -11.979 AGVRLPRSPPLKVLA-p Q96E14;S20-p AGVRLPRSPPLKVLA 0.869521280017076 0.00629476989233203 0.0246666666666667 -0.718333333333333 1.1861537101246 31.6946474825429 0.0246666666666667 -0.718333333333333 0.760999951316702 0.000676916736118904 0.319942666368872 -6.95291050915313 Q96E14 RMI2 Q96E14.S20.p_RMI2 Q96E14_S20s _1_1_20_20 Q96E14 Q96E14|I3L2E0 RecQ-mediated genome instability protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21774.21774.3 15.79 15.79 1.124 3 1 1 0 858.4528 2493.3775 S20s Acetyl 2 (M) AAAADSFSGGPAGVRLPRsPPLK (V) AAAADS(0.0)FS(0.0)GGPAGVRLPRS(0.99)PPLK K:TMT10,s:Phosphorylated S RMI2 16036.2 6 2 3626.1 46.66 HUMAN 1 1.1862 -31.6946 AGVSLDQSALLPLRF-p O60503;S710-p AGVSLDQSALLPLRF 0.260789944862731 0.634857049035223 -0.400333333333333 -0.0586666666666667 11.0572339891862 2.68450873384127 -0.400333333333334 -0.0586666666666667 0.0783928766096357 0.538950807077678 -2.16613929317577 -0.655483595534891 O60503 ADCY9 O60503.S710.p_ADCY9 O60503_S710s _1_1_710_710 O60503 O60503 Adenylate cyclase type 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33168.33168.3 17.36 14.4 5.349 2 1 1 0 645.6795 1855.0639 S710s TMT10 702 (R) WAGVSLDQsALLPLR (F) WAGVS(0.0)LDQS(0.99)ALLPLR s:Phosphorylated S ADCY9 152923.1 1 11 658.1 252.1 HUMAN 1 -11.0572 -2.6845 AGVTLPPTPSGSRTK-p Q6P996;T691-p AGVTLPPTPSGSRTK 0.952442048084725 0.0329470161815815 -0.0153333333333333 -0.317 0.418469306072485 19.9888342548831 -0.0153333333333333 -0.317 0.90814055273077 0.0100257431570071 -0.120889685214546 -3.87293300903173 Q6P996 PDXDC1 Q6P996.T691.p_PDXDC1 Q6P996_T691t _1_1_691_691 Q6P996 H3BND4|Q6P996|Q6P996-5|Q6P996-4 Pyridoxal-dependent decarboxylase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12479.12479.3 10.31 10.31 2.541 4 1 1 0 602.3104 1724.9493 T691t TMT10 681 (K) AQGAGVTLPPtPSGSR (T) AQGAGVT(0.0)LPPT(0.99)PS(0.0)GS(0.0)R t:Phosphorylated T PDXDC1 87618.2 1 12 600.1 263.32 HUMAN 1 -0.4185 -19.9888 AGYDCTNSPTKNGSF-p Q6ZSZ5;S733-p AGYDCTNSPTKNGSF 0.913601784027945 0.00242886472052485 -0.0186666666666667 -0.717 0.766243825528406 40.1087270696768 -0.0186666666666667 -0.717 0.838253967119515 9.75275452027344e-05 -0.214169565536024 -10.1803755980923 Q6ZSZ5 ARHGEF18 Q6ZSZ5.S733.p_ARHGEF18 Q6ZSZ5_S733s _1_1_733_733 Q6ZSZ5 Q6ZSZ5|Q6ZSZ5-2 Rho guanine nucleotide exchange factor 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10580.10580.4 20.97 20.97 1.657 5 1 1 0 589.7813 2276.1382 S733s TMT10 721 (R) RAETFAGYDCTNsPTK (N) RAET(0.0)FAGY(0.0)DCT(0.0)NS(0.99)PT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARHGEF18 131234.5 14 4 799.1 223.19 HUMAN 1 -0.7662 -40.1087 AGYPLRRSQSLPTTL-p P28290;S737-p AGYPLRRSQSLPTTL 0.687777093309933 0.298069210596652 -0.0643333333333333 0.148666666666667 3.05248614594879 6.93858122045168 -0.0643333333333333 0.148666666666667 0.495166648407065 0.202368017881468 -0.731052811861546 1.44986079596208 P28290 SSFA2 P28290.S737.p_SSFA2 P28290_S737s _1_1_737_737 P28290 P28290|P28290-3|E9PHV5|P28290-2|E7EUL7 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25429.25429.3 14.47 14.47 1.179 5 1 1 0 569.9802 1627.958 S737s TMT10 737 (R) sQSLPTTLLSPVR (V) S(0.99)QS(0.0)LPT(0.0)T(0.0)LLS(0.0)PVR s:Phosphorylated S SSFA2 139638.7 6 18 73.1 652.35 HUMAN 1 -3.0525 6.9386 AGYTLHETPPAGASP-p P0C7T5;T245-p AGYTLHETPPAGASP 0.234733568977743 0.682295405476256 0.181 0.039 12.0690037529589 2.27240801565461 0.181 0.039 0.0621011474420794 0.592596658716112 2.34457991247704 0.568248551022761 P0C7T5 ATXN1L P0C7T5.T245.p_ATXN1L P0C7T5_T245t _1_1_245_245 P0C7T5 P0C7T5 Ataxin-1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22486.22486.4 24.05 18.4 4.769 7 1 1 0 1080.7966 4240.1948 T245t TMT10 236 (R) LPAGYTLHEtPPAGASPVLTPQESQSALEAAAANGGQRPR (E) LPAGY(0.0)T(0.0)LHET(0.99)PPAGAS(0.0)PVLT(0.0)PQES(0.0)QS(0.0)ALEAAAANGGQRPR t:Phosphorylated T ATXN1L 73818.4 1 2 1155.1 171.78 HUMAN 1 12.069 2.2724 AGYVPIRTPARKLTA-p O75533;T426-p AGYVPIRTPARKLTA 0.64124158099539 0.560845399265014 -0.068 0.0616666666666667 3.60358452744734 3.38662610342306 -0.068 0.0616666666666667 0.436155694707498 0.458497940953096 -0.840553068949002 0.797783051600083 O75533 SF3B1 O75533.T426.p_SF3B1 O75533_T426t _1_1_426_426 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26464.26464.4 19.4 19.4 4.703 4 1 1 0 1027.0344 4025.1156 T426t Hydrogen 396 (R) NRPLSDEELDAMFPEGYKVLPPPAGYVPIRtPAR (K) NRPLS(0.0)DEELDAMFPEGY(0.0)KVLPPPAGY(0.0)VPIRT(0.99)PAR K:TMT10-Lys-Only,t:Phosphorylated T SF3B1 146569.5 15 27 53.1 735.77 HUMAN 1 -3.6036 3.3866 AHAAREDSLPEESSA-p Q8TF72;S1441-p AHAAREDSLPEESSA 0.957246455101486 0.774969315446929 0.00899999999999999 -0.0296666666666667 0.370579693969204 1.53100573322348 0.009 -0.0296666666666667 0.91821002611655 0.7029095222082 0.107573550919377 -0.402196022359973 Q8TF72 SHROOM3 Q8TF72.S1441.p_SHROOM3 Q8TF72_S1441s _1_1_1441_1441 Q8TF72 Q8TF72 Protein Shroom3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19709.19709.4 13.85 13.85 1.203 3 1 1 0 770.6309 2999.5263 S1441s TMT10 1433 (K) WAHAAREDsLPEESSAPDFANLK (H) WAHAAREDS(0.99)LPEES(0.0)S(0.0)APDFANLK K:TMT10,s:Phosphorylated S SHROOM3 218451.1 1 48 90.2 622.62 HUMAN 1 0.3706 -1.531 AHAGKHSSP______-p Q9NW64;S419-p AHAGKHSSP______ 0.236551014520431 0.0173615564197841 0.447666666666667 -1.24 11.9960298746834 24.2785662443288 0.447666666666667 -1.24 0.0631534401097414 0.00373373400871145 2.33163040947898 -4.85751386335342 Q9NW64 RBM22 Q9NW64.S419.p_RBM22 Q9NW64_S419s _1_1_419_419 Q9NW64 Q9NW64|Q9NW64-2 Pre-mRNA-splicing factor RBM22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3688.3688.3 14.17 14.17 1.57 2 1 1 0 539.9373 1537.831 S419s TMT10 410 (R) MGAHAGKHSsP (-) MGAHAGKHS(0.0)S(0.99)P K:TMT10,s:Phosphorylated S RBM22 47636.5 5 3 4091.1 37.81 HUMAN 1 11.996 -24.2786 AHESRRDSIVAELDR-p M0QXB4;S99-p AHESRRDSIVAELDR 0.917779579109931 0.398249646301715 0.0163333333333333 0.108333333333333 0.727954522728162 5.31577723743449 0.0163333333333333 0.108333333333333 0.84567705558465 0.29405073971805 0.204173882232343 1.16137644830499 M0QXB4 COPE M0QXB4.S99.p_COPE M0QXB4_S99s _1_1_99_99 M0QXB4 M0QXB4|O14579|O14579-3 Coatomer protein complex, subunit epsilon, isoform CRA_g HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16298.16298.3 15.63 15.63 15.628 2 1 1 0 586.2738 1676.8384 S99s Hydrogen 97 (R) RDsIVAELDREMSR (S) RDS(0.99)IVAELDREMS(0.0)R s:Phosphorylated S COPE 37094.2 3 2 2437.1 83.45 HUMAN 1 0.728 5.3158 AHGPILFSPY_____-p Q96PM9;S384-p AHGPILFSPY_____ 0.708046873229158 0.174836883094283 0.0553333333333333 -0.136 2.81886306418053 9.96057493759135 0.0553333333333334 -0.136 0.52253296455421 0.100911928571086 0.683374927857869 -1.97406702260645 Q96PM9 ZNF385A Q96PM9.S384.p_ZNF385A Q96PM9_S384s _1_1_384_384 Q96PM9 Q96PM9|Q96PM9-1|Q96PM9-3|Q96PM9-2 Zinc finger protein 385A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24475.24475.2 17.87 17.87 2.842 3 1 1 0 756.3804 1431.7834 S384s TMT10 376 (R) TAHGPILFsPY (-) T(0.0)AHGPILFS(0.99)PY(0.0) s:Phosphorylated S ZNF385A 40795.3 2 4 2280.1 89.83 HUMAN 1 2.8189 -9.9606 AHGTSSYTPDKSSFN-p I6L8A6;T245-p AHGTSSYTPDKSSFN 0.942198391977395 0.583086332439995 0.0193333333333333 0.088 0.509470638371123 3.16258892267784 0.0193333333333333 0.088 0.889309509205362 0.482770926126501 0.145862710291052 0.753137787642635 I6L8A6 NotFound I6L8A6.T245.p_NotFound I6L8A6_T245t _1_1_245_245 I6L8A6 Q99708-2|I6L8A6 DNA endonuclease RBBP8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5359.5359.3 19.16 19.16 1.5 5 1 1 0 567.9467 1621.8586 T245t TMT10 238 (K) AHGTSSYtPDK (S) AHGT(0.0)S(0.0)S(0.0)Y(0.0)T(0.99)PDK K:TMT10,t:Phosphorylated T RBBP8 103921.2 1 4 258.1 398.22 HUMAN 1 0.5095 3.1626 AHLGRVVSPTKEQVS-p O60303;S453-p AHLGRVVSPTKEQVS 0.147678627020547 0.00256376979859587 0.335666666666667 -1.03766666666667 16.8577974478736 39.5790120611685 0.335666666666667 -1.03766666666667 0.0206167523990485 0.000110178991766373 3.23467900347573 -9.94360692883632 O60303 KIAA0556 O60303.S453.p_KIAA0556 O60303_S453s _1_1_453_453 O60303 O60303 Protein KIAA0556 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12402.12402.3 13.11 5.37 1.516 4 1 1 0 810.4301 2349.3116 S453s TMT10 451 (R) VVsPTKEQVSDTEDK (Q) VVS(0.99)PT(0.0)KEQVS(0.0)DT(0.0)EDK K:TMT10,s:Phosphorylated S KIAA0556 182055.4 2 3 1063.1 181.85 HUMAN 1 16.8578 -39.579 AHLSPAKTPPPPAMI-p Q86X29-6;T180-p AHLSPAKTPPPPAMI 0.194933326368064 0.607412927481371 0.274666666666667 0.101666666666667 13.8509508969321 2.93990794052942 0.274666666666667 0.101666666666667 0.041200729935323 0.50817021437255 2.66559341007057 0.708082026618248 Q86X29 LSR Q86X29.6.T180.p_LSR Q86X29-6_T180t_1_1_180_180 Q86X29-6 Q86X29|Q86X29-4|Q86X29-3|S4R3V8|Q86X29-2|Q86X29-5|Q86X29-6 Isoform 6 of Lipolysis-stimulated lipoprotein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27952.28391.5 21.27 21.27 1.166 12 1 1 0 1100.1404 5415.7223 T180t N194n TMT10 158 (K) AATSGVPSIYAPSTYAHLSPAKtPPPPAMIPMGPAYnGYPGGYPGDVDR (S) AAT(0.0)S(0.0)GVPS(0.0)IY(0.0)APS(0.0)T(0.0)Y(0.0)AHLS(0.0)PAKT(0.99)PPPPAMIPMGPAY(0.0)N(1.0)GY(0.0)PGGY(0.0)PGDVDR K:TMT10,t:Phosphorylated T,n:Deamidated LSR 54725.6 5 3 206.1 448.79 HUMAN 1 13.851 2.9399 AHMLRSRSLPAFPTS-p Q99698;S2105-p AHMLRSRSLPAFPTS 0.923651865209349 0.0645670333583342 0.0146666666666667 0.225666666666667 0.679125524760159 15.8386359465667 0.0146666666666667 0.225666666666667 0.855238902489948 0.0260697223206358 0.191333302080722 3.03514977067415 Q99698 LYST Q99698.S2105.p_LYST Q99698_S2105s _1_1_2105_2105 Q99698 Q99698 Lysosomal-trafficking regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27227.27227.2 19.15 19.15 8.779 6 1 1 0 1007.527 1934.0796 S2105s Hydrogen 2105 (R) sLPAFPTSSLLTQSQK (L) S(0.99)LPAFPT(0.0)S(0.0)S(0.0)LLT(0.0)QS(0.0)QK K:TMT10-Lys-Only,s:Phosphorylated S LYST 434437.2 8 5 1334.1 152.67 HUMAN 1 0.6791 15.8386 AHNENKFYNVHFSNK-p Q8NDB2;Y759-p AHNENKFYNVHFSNK 0.40723792230155 0.806985687423568 0.182333333333333 -0.0246666666666666 7.20507591696568 1.30284044515338 0.182333333333333 -0.0246666666666666 0.190323496773466 0.740825555740001 1.49686507867591 -0.348171921998188 Q8NDB2 BANK1 Q8NDB2.Y759.p_BANK1 Q8NDB2_T751tY759yS764s_3_3_751_764 Q8NDB2 Q8NDB2|Q8NDB2-2|Q8NDB2-3|Q8NDB2-4 B-cell scaffold protein with ankyrin repeats HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25453.25742.4 7.02 3.59 99 3 3 3 0 1064.2836 4014.212 T751t Y759y S764s TMT10 750 (K) EtAHNENKFyNVHFsNKLPARPQVEK (E) ET(1.0)AHNENKFY(1.0)NVHFS(1.0)NKLPARPQVEK K:TMT10,t:Phosphorylated T,y:Phosphorylated Y,s:Phosphorylated S BANK1 90250.2 4 1 7287.1 7.02 HUMAN 1 7.2051 -1.3028 AHNSGEDSDLKQRRR-p Q9HCS5;S468-p AHNSGEDSDLKQRRR 0.126572282263763 0.801366684110004 0.340333333333333 0.051 18.6169111953669 1.3448439278572 0.340333333333333 0.0510000000000001 0.0137501957362868 0.733695080699913 3.5882101643677 0.358237011760928 Q9HCS5 EPB41L4A Q9HCS5.S468.p_EPB41L4A Q9HCS5_S464sS468s_2_2_464_468 Q9HCS5 Q9HCS5 Band 4.1-like protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7554.7554.3 11.22 11.22 99 2 2 2 0 597.5969 1630.8437 S464s S468s TMT10 461 (K) AHNsGEDsDLK (Q) AHNS(1.0)GEDS(1.0)DLK K:TMT10,s:Phosphorylated S EPB41L4A 79741.9 3 15 696.1 241.4 HUMAN 1 18.6169 1.3448 AHPALMLSPDRRGVR-p Q8WV44;S447-p AHPALMLSPDRRGVR 0.411970467877201 0.68069217099329 0.117 0.0426666666666667 7.10509341682982 2.28387367784926 0.117 0.0426666666666667 0.194755915745548 0.591034227625119 1.47939701275236 0.570719070167267 Q8WV44 TRIM41 Q8WV44.S447.p_TRIM41 Q8WV44_S447s _1_1_447_447 Q8WV44 Q8WV44|Q8WV44-2|Q8WV44-3 E3 ubiquitin-protein ligase TRIM41 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26298.26298.3 16.24 16.24 1.708 3 1 1 0 829.4151 2406.2536 S447s TMT10 431 (R) VDLTLDPDTAHPALMLsPDR (R) VDLT(0.0)LDPDT(0.0)AHPALMLS(0.99)PDR s:Phosphorylated S TRIM41 72752.7 12 1 3858.1 41.62 HUMAN 1 7.1051 2.2839 AHPDLRASGGSGAGK-p P49715-4;S301-p AHPDLRASGGSGAGK 0.578243971826855 0.0215974885655669 -0.0923333333333334 -0.539333333333333 4.3746425287216 22.7739850248209 -0.0923333333333333 -0.539333333333333 0.36520418626781 0.00527960580274418 -0.988099030575364 -4.49622818258278 P49715 CEBPA P49715.4.S301.p_CEBPA P49715-4_S301s _1_1_301_301 P49715-4 P49715-4|P49715-2 Isoform 4 of CCAAT/enhancer-binding protein alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9367.9367.3 8.58 5.7 1.101 2 1 1 0 739.72 2137.1878 S301s TMT10 290 (K) GLGAAHPDLRAsGGSGAGK (A) GLGAAHPDLRAS(0.99)GGS(0.0)GAGK K:TMT10,s:Phosphorylated S CEBPA 41533.9 2 1 5774.1 16.41 HUMAN 1 -4.3746 -22.774 AHPKNHLSPQQGGAT-p Q9H4L4;S169-p AHPKNHLSPQQGGAT 0.30640218952216 0.725410031894108 0.150666666666667 0.0423333333333334 9.61872106901796 1.91935682651633 0.150666666666667 0.0423333333333334 0.10917617963042 0.642782903953113 1.91553851710751 0.49081187967996 Q9H4L4 SENP3 Q9H4L4.S169.p_SENP3 Q9H4L4_S169s _1_1_169_169 Q9H4L4 Q9H4L4|A0A087X0R7 Sentrin-specific protease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9780.9990.3 22.84 22.84 6.875 3 1 1 0 834.053 2420.1761 S169s TMT10 166 (K) NHLsPQQGGATPQVPSPCCR (F) NHLS(0.99)PQQGGAT(0.0)PQVPS(0.0)PCCR C:Carbamidomethylation,s:Phosphorylated S SENP3 65636.2 6 3 396.1 329.46 HUMAN 1 9.6187 1.9194 AHPQLPLTPLTPTPR-p Q96PN7;T743-p AHPQLPLTPLTPTPR 0.781783194314642 0.606392025785509 -0.0483333333333333 -0.0553333333333333 2.05155153267078 2.94872593783605 -0.0483333333333334 -0.0553333333333333 0.623512043765999 0.507139462740255 -0.520188469540882 -0.709879918069678 Q96PN7 TRERF1 Q96PN7.T743.p_TRERF1 Q96PN7_T743tT746t_2_2_743_746 Q96PN7 Q96PN7 Transcriptional-regulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28583.28583.4 20.14 20.14 1.781 6 2 2 0 909.7131 3475.9011 T743t T746t TMT10 719 (R) QGSGLFSNVLISGHGPGAHPQLPLtPLtPTPR (V) QGS(0.0)GLFS(0.0)NVLIS(0.0)GHGPGAHPQLPLT(0.99)PLT(0.99)PT(0.0)PR t:Phosphorylated T TRERF1 132995.3 1 11 1115.1 175.65 HUMAN 1 -2.0516 -2.9487 AHPSPHASPMNKNAD-p Q9BUR4;S30-p AHPSPHASPMNKNAD 0.847993395084861 0.724856958779287 0.033 -0.0416666666666667 1.38614562564721 1.92438303939046 0.033 -0.0416666666666667 0.726750664329552 0.642039423426519 0.368118390837044 -0.491933900483524 Q9BUR4 WRAP53 Q9BUR4.S30.p_WRAP53 Q9BUR4_S26sS30s_2_2_26_30 Q9BUR4 Q9BUR4|E9PMG4|E9PMR3 Telomerase Cajal body protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15251.15251.5 16.92 16.92 1.296 5 2 2 0 820.9667 3924.8719 S26s S30s M32m TMT10 3 (K) TLETQPLAPDCCPSDQDPAPAHPsPHAsPmNK (N) T(0.0)LET(0.0)QPLAPDCCPS(0.0)DQDPAPAHPS(0.99)PHAS(0.99)PM(1.0)NK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,m:Oxidized methionine WRAP53 60164.1 7 9 1145.1 172.91 HUMAN 1 1.3861 -1.9244 AHPSQAPSPNQPTKH-p P56545-2;S968-p AHPSQAPSPNQPTKH 0.440444853294815 0.0382457970671301 0.108333333333333 0.301333333333333 6.55911328897903 19.0416841387352 0.108333333333333 0.301333333333334 0.220845559345977 0.0124689988856755 1.38359543589494 3.67300806924419 P56545 CTBP2 P56545.2.S968.p_CTBP2 P56545-2_S968s_1_1_968_968 P56545-2 P56545|P56545-2|P56545-3 Isoform 2 of C-terminal-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28971.28971.5 25.36 20.46 1.443 6 1 1 0 1052.16 5160.8073 M943m S968s TMT10 927 (R) YPPGIVGVAPGGLPAAmEGIIPGGIPVTHNLPTVAHPSQAPsPNQPTK (H) Y(0.0)PPGIVGVAPGGLPAAM(1.0)EGIIPGGIPVT(0.0)HNLPT(0.0)VAHPS(0.0)QAPS(0.99)PNQPT(0.0)K K:TMT10,m:Oxidized methionine,s:Phosphorylated S CTBP2 106812.5 14 2 3569.1 48.05 HUMAN 1 6.5591 19.0417 AHQITDESLESTRRI-p O00161;S20-p AHQITDESLESTRRI 0.865417944085973 0.43499406711115 0.0313333333333333 -0.0933333333333333 1.22110585116784 4.81727205746611 0.0313333333333333 -0.0933333333333333 0.754899981769068 0.329816815616363 0.328456504310081 -1.07025371779338 O00161 SNAP23 O00161.S20.p_SNAP23 O00161_S20s _1_1_20_20 O00161 H3BNG6|O00161|O00161-2|H3BPJ0|H3BNE1|H3BU94 Synaptosomal-associated protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5512.5512.3 15.43 15.43 2.489 4 1 1 0 651.3197 1871.9773 S20s TMT10 13 (R) AHQITDEsLESTRR (I) AHQIT(0.0)DES(0.99)LES(0.0)T(0.0)RR s:Phosphorylated S SNAP23 23696 2 2 1061.1 182.1 HUMAN 1 1.2211 -4.8173 AHRRLEESLDALPRI-p Q6ZS17-4;S1221-p AHRRLEESLDALPRI 0.285418188850423 0.565083380372267 -0.158 -0.086 10.276262075743 3.34223078024751 -0.158 -0.086 0.0938369303473367 0.463208928511072 -2.02975015024214 -0.788987689326264 Q6ZS17 FAM65A Q6ZS17.4.S1221.p_FAM65A Q6ZS17-4_S1221s _1_1_1221_1221 Q6ZS17-4 Q6ZS17-4|A0A0A0MTL6|Q6ZS17-3 Isoform 4 of Rho family-interacting cell polarization regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15181.15181.3 9.08 9.08 99 1 1 1 0 536.6171 1527.8692 S1221s TMT10 1217 (R) RLEEsLDALPR (I) RLEES(1.0)LDALPR s:Phosphorylated S RIPOR1 135393.6 1 7 1530.1 133.82 HUMAN 1 -10.2763 -3.3422 AHSDENPSEGDGAVN-p Q9NZN5;S1394-p AHSDENPSEGDGAVN 0.216762007264091 0.978310404113495 -0.227 0.00300000000000002 12.7921269598277 0.135725959784033 -0.227 0.00300000000000002 0.0525759712193071 0.969231240597855 -2.4736759196456 0.0403854334882677 Q9NZN5 ARHGEF12 Q9NZN5.S1394.p_ARHGEF12 Q9NZN5_S1389sS1394s_2_2_1389_1394 Q9NZN5 Q9NZN5|Q9NZN5-2|E9PMR6 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8038.8038.4 13.35 13.35 99 2 2 2 0 748.0901 2829.4106 S1389s S1394s TMT10 1386 (R) EAHsDENPsEGDGAVNKEEK (D) EAHS(1.0)DENPS(1.0)EGDGAVNKEEK K:TMT10,s:Phosphorylated S ARHGEF12 174199.1 2 20 251.1 406.16 HUMAN 1 -12.7921 0.1357 AHSDSNLSASAAERI-p Q6PEV8;S321-p AHSDSNLSASAAERI 0.916145150674614 0.391923390661678 -0.0163333333333333 0.089 0.741882307581339 5.40863628032156 -0.0163333333333333 0.0890000000000001 0.84296932105778 0.287830208290259 -0.207817188153233 1.17818873690427 Q6PEV8 FAM199X Q6PEV8.S321.p_FAM199X Q6PEV8_S316sS321s_2_2_316_321 Q6PEV8 Q6PEV8 Protein FAM199X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5501.5501.3 8.02 8.02 1.303 4 2 2 0 602.2535 1644.8139 S316s S321s TMT10 314 (R) AHsDSNLsASAAER (I) AHS(0.99)DS(0.0)NLS(0.99)AS(0.0)AAER s:Phosphorylated S FAM199X 43371 2 2 6898.1 8.78 HUMAN 1 -0.7419 5.4086 AHSLIGASPKQTNLT-p P28749;S762-p AHSLIGASPKQTNLT 0.346217798622841 0.00387979257248964 0.201333333333333 -0.805 8.56014050593115 35.6331206993579 0.201333333333333 -0.805 0.139311173130945 0.000273330395686592 1.73221975811899 -8.33023239529712 P28749 RBL1 P28749.S762.p_RBL1 P28749_S762s _1_1_762_762 P28749 P28749|P28749-2 Retinoblastoma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20017.20017.4 16.57 16.57 2 7 1 1 0 755.18 2937.734 S762s TMT10 749 (K) SPVSLTAHSLIGAsPKQTNLTK (A) S(0.0)PVS(0.0)LT(0.0)AHS(0.0)LIGAS(0.99)PKQT(0.0)NLT(0.0)K K:TMT10,s:Phosphorylated S RBL1 122214.1 2 8 566.1 270.71 HUMAN 1 8.5601 -35.6331 AHSSGEQSGSDTDTD-p O14503;S235-p AHSSGEQSGSDTDTD 0.253551933885431 0.0985793174091071 0.251666666666667 0.240666666666667 11.3544410452943 13.3000694509072 0.245330190485186 0.240666666666667 0.0732075538243404 0.0467727661484552 2.21832498334746 2.56383537534284 O14503 BHLHE40 O14503.S235.p_BHLHE40 O14503_S235sS237s_2_2_235_237 O14503 O14503 Class E basic helix-loop-helix protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14947.14947.5 16.95 16.95 2.511 11 2 2 0 961.025 4641.1527 S235s S237s TMT10 226 (R) TFAHSSGEQsGsDTDTDSGYGGESEKGDLRSEQPCFK (S) T(0.0)FAHS(0.0)S(0.0)GEQS(0.99)GS(0.99)DT(0.0)DT(0.0)DS(0.0)GY(0.0)GGES(0.0)EKGDLRS(0.0)EQPCFK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BHLHE40 45965.7 1 3 3180.1 58.51 HUMAN 1 11.3544 13.3001 AHTSRTMSINAAELK-p Q69YN4;S1432-p AHTSRTMSINAAELK 0.0511487796737011 0.0200527645560937 -0.563333333333333 -0.342333333333333 28.2809921608577 23.2668747416679 -0.563333333333333 -0.342333333333333 0.00148559621389162 0.00471316371817432 -5.92568911662075 -4.61255759114115 Q69YN4 KIAA1429 Q69YN4.S1432.p_KIAA1429 Q69YN4_S1432s _1_1_1432_1432 Q69YN4 Q69YN4|Q69YN4-3 Protein virilizer homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20607.20607.3 7.99 7.99 2.18 2 1 1 0 539.2887 1535.8867 S1432s TMT10 1430 (R) TMsINAAELK (Q) T(0.0)MS(0.99)INAAELK K:TMT10,s:Phosphorylated S VIRMA 203675.9 1 4 1178.1 169.26 HUMAN 1 -28.281 -23.2669 AHVAKGKSVFLEQMK-p Q7L1Q6-3;S423-p AHVAKGKSVFLEQMK 0.0188125555564293 0.297272783794614 -1.45433333333333 -0.156 40.6089637394961 6.95436894570367 -1.45433333333333 -0.156 8.69167794760173e-05 0.201633693447074 -10.4332839420137 -1.45262464480915 Q7L1Q6 BZW1 Q7L1Q6.3.S423.p_BZW1 Q7L1Q6-3_S423s _1_1_423_423 Q7L1Q6-3 Q7L1Q6-3|Q7L1Q6-4|Q7L1Q6-2 Isoform 3 of Basic leucine zipper and W2 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21017.21017.3 12.58 12.58 99 1 1 1 0 645.3648 1854.1126 S423s TMT10 421 (K) GKsVFLEQMK (K) GKS(1.0)VFLEQMK K:TMT10,s:Phosphorylated S BZW1 51452.2 1 3 4254.1 34.62 HUMAN 1 -40.609 -6.9544 AHVNRADSPPKEEQG-p Q9H777;S146-p AHVNRADSPPKEEQG 0.50890115677471 0.0559529472187686 0.0936666666666667 0.386333333333333 5.41512626289053 16.682289153083 0.0936666666666667 0.386333333333333 0.287400403617941 0.0214669865749647 1.17961750328247 3.19793810969086 Q9H777 ELAC1 Q9H777.S146.p_ELAC1 Q9H777_S146s _1_1_146_146 Q9H777 Q9H777|K7EIJ1 Zinc phosphodiesterase ELAC protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6114.6114.5 10.98 10.98 99 1 1 1 0 521.864 2525.3261 S146s TMT10 137 (K) EFAHVNRADsPPKEEQGR (T) EFAHVNRADS(1.0)PPKEEQGR K:TMT10,s:Phosphorylated S ELAC1 40532 2 1 5300.1 20.81 HUMAN 1 5.4151 16.6823 AIDETWDSQSVSPWW-p Q9H2M9;S814-p AIDETWDSQSVSPWW 0.461109615255932 0.00228635428030843 -0.172666666666667 0.767333333333333 6.19867312570352 40.7499180206473 -0.172666666666667 0.767333333333333 0.239956593225311 8.41411024342982e-05 -1.31987938490997 10.4738643518833 Q9H2M9 RAB3GAP2 Q9H2M9.S814.p_RAB3GAP2 Q9H2M9_S814s _1_1_814_814 Q9H2M9 Q9H2M9 Rab3 GTPase-activating protein non-catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31319.31319.3 16.22 16.22 1.186 4 1 1 0 920.0893 2678.2871 S814s TMT10 806 (K) VAIDETWDsQSVSPWWQQMR (T) VAIDET(0.0)WDS(0.99)QS(0.0)VS(0.0)PWWQQMR s:Phosphorylated S RAB3GAP2 157579.4 1 6 1674.1 121.94 HUMAN 1 -6.1987 40.7499 AIDPSMVSAEELEVQ-p Q9NZD8;S290-p AIDPSMVSAEELEVQ 0.283177951218012 0.407023374204228 0.161333333333333 0.0856666666666667 10.3534697417034 5.19526789891521 0.161333333333333 0.0856666666666667 0.0921834644557788 0.302324407291068 2.04319275224877 1.13948653288965 Q9NZD8 SPG21 Q9NZD8.S290.p_SPG21 Q9NZD8_S290s _1_1_290_290 Q9NZD8 Q9NZD8|Q9NZD8-2|H3BRR0 Maspardin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26039.26039.3 7.41 7.41 3.165 3 1 1 0 840.0911 2438.2889 S290s TMT10 281 (K) YAAIDPSMVsAEELEVQK (G) Y(0.0)AAIDPS(0.0)MVS(0.99)AEELEVQK K:TMT10,s:Phosphorylated S SPG21 35244.8 3 1 4418.1 31.74 HUMAN 1 10.3535 5.1953 AIDSDAESPAKRVCQ-p P28749;S1041-p AIDSDAESPAKRVCQ 0.109204251400589 0.00129606731851265 -0.377333333333333 -1.14 20.1441522100314 47.1704905820017 -0.377333333333333 -1.14 0.00967352545936606 1.91845201878464e-05 -3.90995550363975 -13.8795502220921 P28749 RBL1 P28749.S1041.p_RBL1 P28749_S1041s _1_1_1041_1041 P28749 P28749 Retinoblastoma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12912.12912.3 15.79 9.17 6.529 2 1 1 0 670.6946 1930.101 S1041s TMT10 1031 (K) RVIAIDSDAEsPAK (R) RVIAIDS(0.0)DAES(0.99)PAK K:TMT10,s:Phosphorylated S RBL1 122214.1 9 13 566.1 270.71 HUMAN 1 -20.1442 -47.1705 AIEAVAISPWKTYQL-p Q9H4A4;S528-p AIEAVAISPWKTYQL 0.368041649069891 0.00580592124960547 -0.433 0.679666666666667 8.04908243775854 32.3231303049703 -0.433 0.679666666666667 0.1567082122783 0.000585715840444733 -1.643674057586 7.15876624201934 Q9H4A4 RNPEP Q9H4A4.S528.p_RNPEP Q9H4A4_S528s _1_1_528_528 Q9H4A4 Q9H4A4|A6NKB8 Aminopeptidase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26764.26764.3 13.38 13.38 99 1 1 1 0 574.9911 1642.9933 S528s TMT10 521 (K) AIEAVAIsPWK (T) AIEAVAIS(1.0)PWK K:TMT10,s:Phosphorylated S RNPEP 73279.1 1 2 2733.1 72.39 HUMAN 1 -8.0491 32.3231 AIEDEMESDENEDLI-p Q92614;S1942-p AIEDEMESDENEDLI 0.506520727045966 0.420407827165053 -0.0906666666666667 0.191 5.45260991972596 5.00999978651652 -0.0906666666666667 0.191 0.284930544504427 0.315500477846326 -1.18639266890755 1.10566646054466 Q92614 MYO18A Q92614.S1942.p_MYO18A Q92614_S1942s_1_1_1942_1942 Q92614 Q92614|Q92614-2 Unconventional myosin-XVIIIa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.32368.32368.4 9.56 4.34 1.154 3 1 1 0 923.4194 3594.6876 M1940m S1942s Hydrogen 1929 (R) IGDLQAAIEDEmEsDENEDLINSLQDMVTK (Y) IGDLQAAIEDEM(0.99)ES(0.99)DENEDLINS(0.0)LQDM(0.0)VT(0.0)K K:TMT10-Lys-Only,m:Oxidized methionine,s:Phosphorylated S MYO18A 234309.1 1 9 783.1 225.59 HUMAN 1 -5.4526 5.01 AIEINPDSAQPYKWR-p P50502;S181-p AIEINPDSAQPYKWR 0.390849504034051 0.744658741972167 -0.217666666666667 0.0396666666666667 7.53831203449388 1.76710739815464 -0.217666666666667 0.0396666666666667 0.176266100396182 0.665716406448195 -1.55495107135901 0.4565346626556 P50502 ST13 P50502.S181.p_ST13 P50502_S181s _1_1_181_181 P50502 P50502|Q8NFI4|Q8IZP2|Q3KNR6 Hsc70-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18975.18975.3 8.79 8.79 8.787 2 1 1 0 662.0127 1904.053 S181s TMT10 174 (R) AIEINPDsAQPYK (W) AIEINPDS(0.99)AQPY(0.0)K K:TMT10,s:Phosphorylated S ST13 41502.2 1 4 2700.1 73.52 HUMAN 1 -7.5383 1.7671 AIENKVESKGNSPPS-p P41227;S182-p AIENKVESKGNSPPS 0.06600969777365 0.0202310608261175 0.476666666666667 0.325666666666667 25.4298118461417 23.2006297233705 0.476666666666667 0.325666666666667 0.00286430206031812 0.0047856069639041 5.15346507488393 4.59681037557068 P41227 NAA10 P41227.S182.p_NAA10 P41227_S182sS186s_2_2_182_186 P41227 P41227|P41227-2 N-alpha-acetyltransferase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16794.16794.5 13.83 9.79 12.785 4 2 2 0 837.8295 4025.1896 S182s S186s TMT10 170 (R) HVVLGAIENKVEsKGNsPPSSGEACREEK (G) HVVLGAIENKVES(0.99)KGNS(0.99)PPS(0.0)S(0.0)GEACREEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NAA10 26629.2 5 7 1452.1 140.76 HUMAN 1 25.4298 23.2006 AIETRLPSPKSSPAP-p O60504;S299-p AIETRLPSPKSSPAP 0.536923530898403 0.730817548870491 0.107 0.0963333333333333 4.99752887755686 1.87711964240204 0.107 0.0963333333333334 0.316407749857822 0.649064768007206 1.10360523687404 0.481359353421871 O60504 SORBS3 O60504.S299.p_SORBS3 O60504_S299s _1_1_299_299 O60504 O60504|E7EQH0 Vinexin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14305.14305.3 8.62 8.62 8.616 2 1 1 0 550.6514 1569.9728 S299s TMT10 292 (R) AIETRLPsPK (S) AIET(0.0)RLPS(0.99)PK K:TMT10,s:Phosphorylated S SORBS3 75567.9 2 1 1539.2 133.11 HUMAN 1 4.9975 1.8771 AIGGIILTASHNPGG-p P36871;T115-p AIGGIILTASHNPGG 0.881910569851389 0.0101316613660173 -0.0266666666666667 0.735 1.07355873307464 28.0102376389988 -0.0266666666666667 0.735 0.78098757877747 0.0015811615182723 -0.292229427928562 5.84038805314664 P36871 PGM1 P36871.T115.p_PGM1 P36871_T115t _1_1_115_115 P36871 P36871|P36871-2 Phosphoglucomutase-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25782.25782.5 13.75 13.75 1.185 2 1 1 0 549.6971 2664.4874 T115t TMT10 108 (K) AIGGIILtASHNPGGPNGDFGIK (F) AIGGIILT(0.99)AS(0.0)HNPGGPNGDFGIK K:TMT10,t:Phosphorylated T PGM1 61733.3 16 2 2909.1 66.18 HUMAN 1 -1.0736 28.0102 AIGLKGSSPTPPCSP-p Q9NUL3;S486-p AIGLKGSSPTPPCSP 0.467640420747177 0.0156410366582229 0.133333333333333 -0.394 6.09577692270854 24.9618546101134 0.133333333333333 -0.394 0.245709703427705 0.00319017523250866 1.30160752419978 -5.02785928097371 Q9NUL3 STAU2 Q9NUL3.S486.p_STAU2 Q9NUL3_S486s _1_1_486_486 Q9NUL3 Q9NUL3|A0A0A0MTC5|Q9NUL3-2|E9PH62|E7EVJ4|A0A0A0MTD1|Q9NUL3-6|A0A0A0MTC4|Q9NUL3-4|G5EA18 Double-stranded RNA-binding protein Staufen homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11511.11511.2 15.41 11.04 1.103 5 1 1 0 1032.5172 1984.0574 S486s TMT10 484 (K) GSsPTPPCSPVQPSK (Q) GS(0.0)S(0.99)PT(0.0)PPCS(0.0)PVQPS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S STAU2 62867.6 5 8 1170.1 170.28 HUMAN 1 6.0958 -24.9619 AIHTFVQSGSHLAAR-p P04040;S515-p AIHTFVQSGSHLAAR 0.254022601449777 0.979322604665725 -0.261666666666667 -0.00299999999999998 11.3374532660893 0.130220874363521 -0.261666666666667 -0.00299999999999997 0.073494471865858 0.970460610108955 -2.2153373640504 -0.0387708508387271 P04040 CAT P04040.S515.p_CAT P04040_S515s _1_1_515_515 P04040 P04040 Catalase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12052.12052.3 18.76 18.76 1.227 3 1 1 0 673.3444 1938.0507 S515s TMT10 507 (K) NAIHTFVQsGSHLAAR (E) NAIHT(0.0)FVQS(0.99)GS(0.0)HLAAR s:Phosphorylated S CAT 59983.3 3 1 5497.1 18.76 HUMAN 1 -11.3375 -0.1302 AIKGARVSDFGGRSL-p P27694;S384-p AIKGARVSDFGGRSL 0.788927294767127 0.00671367697232148 -0.041 -0.608333333333333 1.98490646339261 31.2080596514809 -0.041 -0.608333333333333 0.633153998181381 0.000757171109700413 -0.505456868185669 -6.7969179650635 P27694 RPA1 P27694.S384.p_RPA1 P27694_S384s _1_1_384_384 P27694 P27694 Replication protein A 70 kDa DNA-binding subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7043.7043.3 10.91 10.91 99 1 1 1 0 444.2204 1250.6803 S384s TMT10 380 (K) GARVsDFGGR (S) GARVS(1.0)DFGGR s:Phosphorylated S RPA1 68764.6 3 5 1852.1 110.98 HUMAN 1 -1.9849 -31.2081 AIKHEEQSNEDIPIA-p Q12888-2;S227-p AIKHEEQSNEDIPIA 0.81449177054185 0.00586881276858094 -0.045 0.523 1.70941032759821 32.2447686942978 -0.045 0.523 0.674619619367324 0.000596380082254789 -0.443441887229292 7.13282586416668 Q12888 TP53BP1 Q12888.2.S227.p_TP53BP1 Q12888-2_S227s _1_1_227_227 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20172.20172.5 25.87 19.19 4.428 7 1 1 0 1021.1331 5021.6725 S227s TMT10 212 (R) LSDVDANTAIKHEEQsNEDIPIAEQSSKDIPVTAQPSK (D) LS(0.0)DVDANT(0.0)AIKHEEQS(0.99)NEDIPIAEQS(0.0)S(0.0)KDIPVT(0.0)AQPS(0.0)K K:TMT10,s:Phosphorylated S TP53BP1 216167.2 6 9 3.1 2297.07 HUMAN 1 -1.7094 32.2448 AIKIKSASPCIADKI-p Q05209;S468-p AIKIKSASPCIADKI 0.18516399568195 0.0158723558616884 -0.208 -0.391333333333333 14.4058144856568 24.8691581289619 -0.208 -0.391333333333333 0.0362592278495029 0.0032589986990752 -2.767736147545 -5.00451101057846 Q05209 PTPN12 Q05209.S468.p_PTPN12 Q05209_S468s _1_1_468_468 Q05209 Q05209|Q05209-3|Q05209-2 Tyrosine-protein phosphatase non-receptor type 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10368.10368.2 10.63 7.87 2.993 2 1 1 0 743.873 1406.7714 S468s TMT10 466 (K) SAsPCIADK (I) S(0.0)AS(0.99)PCIADK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PTPN12 88960.6 2 6 644.1 254.82 HUMAN 1 -14.4058 -24.8692 AIKTWRFSNMKQWNV-p Q96AC1-3;S617-p AIKTWRFSNMKQWNV 0.076653254650921 0.0496442233233215 -0.584666666666667 0.287 23.9314006231494 17.4430069031499 -0.584666666666667 0.287 0.00404445434825931 0.0180176982647088 -4.7781257980712 3.34777013984246 Q96AC1 FERMT2 Q96AC1.3.S617.p_FERMT2 Q96AC1-3_S617s _1_1_617_617 Q96AC1-3 Q96AC1-3|Q96AC1-2 Isoform 3 of Fermitin family homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18862.18862.3 10.6 10.6 10.603 2 1 1 0 536.6109 1527.8506 S617s TMT10 613 (K) TWRFsNMK (Q) T(0.0)WRFS(0.99)NMK K:TMT10,s:Phosphorylated S FERMT2 79301.6 1 8 1095.1 178.25 HUMAN 1 -23.9314 17.443 AILESLISINNKLQQ-p P42345;S1418-p AILESLISINNKLQQ 0.741269599386783 0.0310889125388133 -0.0753333333333333 0.409666666666667 2.46799145944809 20.3713805111313 -0.0753333333333334 0.409666666666667 0.566501225962785 0.00918040728419328 -0.610117219448935 3.95532062366867 P42345 MTOR P42345.S1418.p_MTOR P42345_S1418s _1_1_1418_1418 P42345 P42345 Serine/threonine-protein kinase mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.34686.34686.3 18.46 12.33 3.308 3 1 1 0 735.7471 2125.2633 S1418s TMT10 1407 (K) GPTPAILESLIsINNK (L) GPT(0.0)PAILES(0.0)LIS(0.99)INNK K:TMT10,s:Phosphorylated S MTOR 290940.5 4 2 571.1 269.24 HUMAN 1 -2.468 20.3714 AILEVLQS_______-p Q3LXA3;S575-p AILEVLQS_______ 0.394816276560308 0.211432893164682 0.138 0.18 7.44901431756226 8.87817783900429 0.138 0.18 0.179927923638835 0.129473895863666 1.539404179864 1.78664181905589 Q3LXA3 TKFC Q3LXA3.S575.p_TKFC Q3LXA3_S575s _1_1_575_575 Q3LXA3 Q3LXA3 Triokinase/FMN cyclase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29390.29390.2 7.42 7.42 99 1 1 1 0 591.3233 1101.6717 S575s TMT10 568 (R) AILEVLQs (-) AILEVLQS(1.0) s:Phosphorylated S TKFC 59288.4 1 8 1831.1 112.39 HUMAN 1 7.449 8.8782 AILHRFNSPCQERSR-p Q8IZD2;S837-p AILHRFNSPCQERSR 0.0823892268674676 0.0736610869230557 0.590666666666667 0.382 23.1724316358356 15.039616978985 0.590666666666667 0.382 0.00481678028248968 0.0313356207302624 4.59530884589744 2.88399664927722 Q8IZD2 KMT2E Q8IZD2.S837.p_KMT2E Q8IZD2_S837s _1_1_837_837 Q8IZD2 Q8IZD2|Q8IZD2-7|Q8IZD2-2|Q8IZD2-5|Q8IZD2-6|Q8IZD2-8 Histone-lysine N-methyltransferase 2E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6996.6996.2 9.16 9.16 99 1 1 1 0 673.7924 1266.6098 S837s TMT10 835 (R) FNsPCQER (S) FNS(1.0)PCQER C:Carbamidomethylation,s:Phosphorylated S KMT2E 207015.2 1 4 544.1 275.86 HUMAN 1 23.1724 15.0396 AILLARRSKAEELGL-p P09110;S291-p AILLARRSKAEELGL 0.817374624643113 0.0383805689178146 -0.0443333333333333 0.257666666666667 1.68295269123898 19.0203134146857 -0.0443333333333333 0.257666666666667 0.678742011042692 0.0125305074351931 -0.437385784345188 3.66856171720649 P09110 ACAA1 P09110.S291.p_ACAA1 P09110_S291s _1_1_291_291 P09110 P09110|C9JDE9 3-ketoacyl-CoA thiolase, peroxisomal HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32494.32494.3 12.45 12.45 99 1 1 1 0 711.7519 2053.2785 S291s TMT10 291 (R) sKAEELGLPILGVLR (S) S(1.0)KAEELGLPILGVLR K:TMT10,s:Phosphorylated S ACAA1 44861.8 1 1 6313.1 12.45 HUMAN 1 -1.683 19.0203 AILNPPPSPATERSH-p O75581;S1490-p AILNPPPSPATERSH 0.957671660631549 0.180083553846864 -0.00933333333333334 -0.173 0.366386499528044 9.79288741981035 -0.00933333333333334 -0.173 0.919097003195991 0.104884486915263 -0.106401709723114 -1.94498112131912 O75581 LRP6 O75581.S1490.p_LRP6 O75581_S1490s _1_1_1490_1490 O75581 O75581|F5H7J9 Low-density lipoprotein receptor-related protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26861.26861.3 16.74 16.74 1.345 4 1 1 0 746.381 2157.1542 S1490s TMT10 1478 (K) GTYFPAILNPPPsPATER (S) GT(0.0)Y(0.0)FPAILNPPPS(0.99)PAT(0.0)ER s:Phosphorylated S LRP6 183450 4 1 4886.1 25.46 HUMAN 1 -0.3664 -9.7929 AILSNTPSLLALRHV-p Q9H6A9;S1697-p AILSNTPSLLALRHV 0.989497403870838 0.961746276299718 -0.00366666666666669 -0.00966666666666666 0.0934410752027609 0.242114623075783 -0.00366666666666672 -0.00966666666666669 0.97871420678199 0.945776541219458 -0.0279364573154195 -0.0712191414193001 Q9H6A9 PCNXL3 Q9H6A9.S1697.p_PCNXL3 Q9H6A9_S1697s _1_1_1697_1697 Q9H6A9 Q9H6A9|Q9H6A9-3 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27255.27255.3 14.86 14.86 1.694 4 1 1 0 588.9993 1685.0159 S1697s TMT10 1689 (R) SAILSNTPsLLALR (H) S(0.0)AILS(0.0)NT(0.0)PS(0.99)LLALR s:Phosphorylated S PCNX3 224430.8 1 18 168.1 492.45 HUMAN 1 -0.0934 -0.2421 AINTVYVYGQEKYLL-p Q8IXI2-3;Y465-p AINTVYVYGQEKYLL 0.990688404992445 0.0669950928610148 0.002 0.229666666666667 0.0836712614543734 15.6152109895918 0.002 0.229666666666667 0.980918383688217 0.0274459900172221 0.0250428358586913 2.99259876226851 Q8IXI2 RHOT1 Q8IXI2.3.Y465.p_RHOT1 Q8IXI2-3_Y465y _1_1_465_465 Q8IXI2-3 Q8IXI2-3|Q8IXI2-7 Isoform 3 of Mitochondrial Rho GTPase 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.25406.25406.3 17.9 17.9 2.956 6 1 1 0 779.3937 2256.1953 Y465y TMT10 455 (K) SYYAINTVYVyGQEK (Y) S(0.0)Y(0.0)Y(0.0)AINT(0.0)VY(0.0)VY(0.99)GQEK K:TMT10,y:Phosphorylated Y RHOT1 80915.3 4 1 195.1 17.9 HUMAN 1 0.0837 15.6152 AIPDLEDSPPVSDSE-p Q9BTC0;S805-p AIPDLEDSPPVSDSE 0.383105758171724 0.0263681512688514 0.126 0.380333333333333 7.71412885079866 21.4435317477494 0.126 0.380333333333333 0.169272775382594 0.00717210807487919 1.58552686797014 4.19153742681932 Q9BTC0 DIDO1 Q9BTC0.S805.p_DIDO1 Q9BTC0_S805s _1_1_805_805 Q9BTC0 Q9BTC0|Q9BTC0-1 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15574.15574.3 22.43 22.43 5.547 4 1 1 0 912.7252 2656.1857 S805s Hydrogen 796 (R) QEAIPDLEDsPPVSDSEEQQESAR (A) QEAIPDLEDS(0.99)PPVS(0.0)DS(0.0)EEQQES(0.0)AR s:Phosphorylated S DIDO1 245579.9 3 6 153.1 505.54 HUMAN 1 7.7141 21.4435 AIPERRQSPKRLLSR-p Q969F9;S462-p AIPERRQSPKRLLSR 0.170677699585152 0.836290918094298 -0.32 -0.035 15.3198238201255 1.09023070337202 -0.32 -0.0349999999999999 0.0293776882576329 0.7779952217354 -2.93865240977507 -0.296331627431833 Q969F9 HPS3 Q969F9.S462.p_HPS3 Q969F9_S462s _1_1_462_462 Q969F9 Q969F9|Q969F9-2|G5E9V4 Hermansky-Pudlak syndrome 3 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6705.6705.4 9.61 9.61 99 1 1 1 0 537.2923 2066.1759 S462s TMT10 451 (K) AEPEAIPERRQsPK (R) AEPEAIPERRQS(1.0)PK K:TMT10,s:Phosphorylated S HPS3 115616.5 1 1 5797.1 16.2 HUMAN 1 -15.3198 -1.0902 AIPLNGDSEEEANRD-p Q9H089;S252-p AIPLNGDSEEEANRD 0.781374547736925 0.992814044967685 -0.0396666666666667 0.00100000000000002 2.05864796700499 0.0452600208154126 -0.0396666666666667 0.00100000000000002 0.622494048049768 0.989632610806358 -0.521751232476874 0.0136037998634631 Q9H089 LSG1 Q9H089.S252.p_LSG1 Q9H089_S252s_1_1_252_252 Q9H089 Q9H089 Large subunit GTPase 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32927.33550.5 26.96 22.79 3.331 5 1 1 0 809.5985 3963.0248 N249n S252s TMT10 236 (K) VIFWSALAGAIPLnGDsEEEANRDDRQSNTTK (F) VIFWS(0.0)ALAGAIPLN(0.99)GDS(0.99)EEEAN(0.0)RDDRQS(0.0)N(0.0)T(0.0)T(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S LSG1 75908.7 33 2 2901.1 66.43 HUMAN 1 -2.0586 0.0453 AIPPERHSPHHLKEQ-p Q9Y618;S1349-p AIPPERHSPHHLKEQ 0.306811020808849 0.851091892922386 0.172333333333333 0.026 9.5972361033906 0.984951689756098 0.172333333333333 0.026 0.109717622870808 0.797085357194743 1.91181338100556 0.27007289909466 Q9Y618 NCOR2 Q9Y618.S1349.p_NCOR2 Q9Y618_S1349s _1_1_1349_1349 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.4641.5112.4 11.92 11.92 99 1 1 1 0 515.0365 1977.1547 S1349s TMT10 1342 (R) AIPPERHsPHHLK (E) AIPPERHS(1.0)PHHLK K:TMT10,s:Phosphorylated S NCOR2 275540.8 13 20 16.1 1053.89 HUMAN 1 9.5972 0.985 AIPRTPLSPSPMKTP-p Q69YQ0;S868-p AIPRTPLSPSPMKTP 0.409140760823671 0.00387979257248964 0.126 -0.733333333333333 7.15531367078925 35.6237383883088 0.126 -0.733333333333333 0.192516799408874 0.000273921525203665 1.48817360382561 -8.32669141253892 Q69YQ0 SPECC1L Q69YQ0.S868.p_SPECC1L Q69YQ0_S868sS870s_2_2_868_870 Q69YQ0 Q69YQ0|Q69YQ0-2 Cytospin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22168.22168.3 8.29 7.8 1.636 5 2 2 0 928.1367 2622.4512 S868s S870s TMT10 865 (R) TPLsPsPMKTPPAAAVSPMQR (H) T(0.0)PLS(0.99)PS(0.99)PMKT(0.0)PPAAAVS(0.0)PMQR K:TMT10,s:Phosphorylated S SPECC1L 124999.2 4 15 1013.1 188.73 HUMAN 1 7.1553 -35.6237 AIPVESDTDDEGAPR-p Q96D46;T470-p AIPVESDTDDEGAPR 0.297839650550175 0.546607100352311 0.158 0.061 9.89406933707977 3.52758641290148 0.158 0.061 0.102469134102399 0.443855247495705 1.96331242301328 0.825548775308028 Q96D46 NMD3 Q96D46.T470.p_NMD3 Q96D46_S468sT470t_2_2_468_470 Q96D46 C9JA08|Q96D46 60S ribosomal export protein NMD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13612.13612.2 15.96 15.96 11.275 3 2 2 0 1081.9413 2002.9403 S468s T470t TMT10 461 (R) DSAIPVEsDtDDEGAPR (I) DS(0.0)AIPVES(0.99)DT(0.99)DDEGAPR s:Phosphorylated S,t:Phosphorylated T NMD3 58800.3 7 8 1402.1 146.41 HUMAN 1 9.8941 3.5276 AIQAAWPSGTECIAK-p P41240;S10-p AIQAAWPSGTECIAK 0.454939501024606 0.535697659297495 -0.144666666666667 -0.0693333333333333 6.30923221701019 3.64776021148144 -0.144666666666667 -0.0693333333333333 0.233925075489392 0.431741681716064 -1.33946929990742 -0.849035166499738 P41240 CSK P41240.S10.p_CSK P41240_S10s _1_1_10_10 P41240 P41240 Tyrosine-protein kinase CSK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25902.25902.2 14.76 14.76 1.136 3 1 1 0 1020.9915 1961 S10s Acetyl 2 (M) SAIQAAWPsGTECIAK (Y) S(0.0)AIQAAWPS(0.99)GT(0.0)ECIAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CSK 51274 1 1 5999.1 14.76 HUMAN 1 -6.3092 -3.6478 AIQAYSESLMTSAPK-p Q8WTV0-2;S493-p AIQAYSESLMTSAPK 0.220266841113801 0.550018155433104 -0.205666666666667 -0.0563333333333333 12.6522574192916 3.49411887415726 -0.205666666666667 -0.0563333333333333 0.0542968028777529 0.447288891560959 -2.44859030087678 -0.818978138824923 Q8WTV0 SCARB1 Q8WTV0.2.S493.p_SCARB1 Q8WTV0-2_S493s _1_1_493_493 Q8WTV0-2 Q8WTV0-2|B7ZKQ9|Q8WTV0-4|Q8WTV0-3 Isoform 1 of Scavenger receptor class B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21687.21687.3 14.83 12.87 2.305 5 1 1 0 755.3832 2184.1622 S493s TMT10 485 (K) EAIQAYSEsLMTSAPK (G) EAIQAY(0.0)S(0.0)ES(0.99)LMT(0.0)S(0.0)APK K:TMT10,s:Phosphorylated S SCARB1 57600 2 1 4290.1 34.11 HUMAN 1 -12.6523 -3.4941 AIQDEIRSVIRQITA-p Q13257;S130-p AIQDEIRSVIRQITA 0.461888377591384 0.0212588656411817 -0.107666666666667 0.352666666666667 6.18683241577382 22.8737809496265 -0.107666666666667 0.352666666666667 0.240611709348641 0.00515966974985942 -1.31777875468998 4.51962652588516 Q13257 MAD2L1 Q13257.S130.p_MAD2L1 Q13257_S130s _1_1_130_130 Q13257 Q13257 Mitotic spindle assembly checkpoint protein MAD2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18259.18259.3 11.75 11.75 99 1 1 1 0 536.9608 1528.9009 S130s TMT10 123 (K) AIQDEIRsVIR (Q) AIQDEIRS(1.0)VIR s:Phosphorylated S MAD2L1 23680.7 1 1 5019.1 23.87 HUMAN 1 -6.1868 22.8738 AIQGPEDSPSRQSRR-p Q15773;S238-p AIQGPEDSPSRQSRR 0.934377786071211 0.406502929574895 0.0136666666666667 -0.118333333333333 0.580033734975533 5.20398903937611 0.0136666666666667 -0.118333333333333 0.874976978585333 0.301717913727923 0.164941212139008 -1.141073477812 Q15773 MLF2 Q15773.S238.p_MLF2 Q15773_S238s _1_1_238_238 Q15773 Q15773 Myeloid leukemia factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14137.14137.3 16.6 16.6 2.312 2 1 1 0 526.9293 1498.8063 S238s TMT10 230 (R) LAIQGPEDsPSR (Q) LAIQGPEDS(0.99)PS(0.0)R s:Phosphorylated S MLF2 28204 7 3 3404.1 51.9 HUMAN 1 0.58 -5.204 AIRGRLGSFHELLLE-p Q5H9R7-5;S315-p AIRGRLGSFHELLLE 0.0745793811074775 0.0261680956701701 -0.561666666666667 -0.379333333333333 24.1531106657306 21.5112057234519 -0.561666666666667 -0.379333333333333 0.00384316414020558 0.00706121487891227 -4.8324342589909 -4.20671900681886 Q5H9R7 PPP6R3 Q5H9R7.5.S315.p_PPP6R3 Q5H9R7-5_S315s _1_1_315_315 Q5H9R7-5 Q5H9R7-5 Isoform 5 of Serine/threonine-protein phosphatase 6 regulatory subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24765.24765.4 14.81 14.81 99 1 1 1 0 594.598 2295.4044 S315s TMT10 313 (R) LGsFHELLLEPPKK (S) LGS(1.0)FHELLLEPPKK K:TMT10,s:Phosphorylated S PPP6R3 99453.3 1 1 896.1 204.08 HUMAN 1 -24.1531 -21.5112 AIRNAMGSLASQATK-p Q5VWC4;S361-p AIRNAMGSLASQATK 0.60319435011139 0.130564668304362 0.079 -0.233333333333333 4.05381782898476 11.6530938586577 0.079 -0.233333333333333 0.393204262482439 0.068342461082143 0.927403042634515 -2.26985566740626 Q5VWC4 PSMD4 Q5VWC4.S361.p_PSMD4 Q5VWC4_S361s _1_1_361_361 Q5VWC4 Q5VWC4|P55036 26S proteasome non-ATPase regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14418.14418.3 14.21 11.65 2.825 3 1 1 0 572.9638 1636.9093 S361s TMT10 357 (R) NAMGsLASQATK (D) NAMGS(0.99)LAS(0.0)QAT(0.0)K K:TMT10,s:Phosphorylated S PSMD4 41306.5 2 5 2823.1 69.24 HUMAN 1 4.0538 -11.6531 AIRVRSHSMETMVGG-p A0A1B0GV05;S548-p AIRVRSHSMETMVGG 0.620347837633728 0.00917359434218356 -0.116333333333333 -0.482666666666667 3.85475648363935 28.8004946376907 -0.116333333333333 -0.482666666666667 0.411646428376542 0.00131810660486498 -0.889262365508842 -6.06619920499557 A0A1B0GV05 NotFound A0A1B0GV05.S548.p_NotFound A0A1B0GV05_S548s _1_1_548_548 A0A1B0GV05 A0A1B0GV05 Rap1 GTPase-activating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10026.10026.3 11.49 11.49 1.151 3 1 1 0 610.6307 1749.9028 S548s TMT10 546 (R) SHsMETMVGGQK (K) S(0.0)HS(0.99)MET(0.0)MVGGQK K:TMT10,s:Phosphorylated S RAP1GAP2 85693.7 1 1 5441.1 19.27 HUMAN 1 -3.8548 -28.8005 AISEKPLSPHPIRIT-p Q2KHM9;S826-p AISEKPLSPHPIRIT 0.363920347814779 0.012757375810306 -0.191666666666667 -0.603333333333333 8.14622859358836 26.4019488998731 -0.191666666666667 -0.603333333333333 0.153241763308782 0.00228983985475258 -1.6605182442236 -5.40059878271618 Q2KHM9 KIAA0753 Q2KHM9.S826.p_KIAA0753 Q2KHM9_S826s _1_1_826_826 Q2KHM9 Q2KHM9|Q2KHM9-2 Protein moonraker HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18633.18633.5 17.66 17.66 3.523 4 1 1 0 551.7313 2674.6587 S826s TMT10 817 (K) ISAISEKPLsPHPIRITK (T) IS(0.0)AIS(0.0)EKPLS(0.99)PHPIRIT(0.0)K K:TMT10,s:Phosphorylated S KIAA0753 110317.7 4 5 2251.1 91.27 HUMAN 1 -8.1462 -26.4019 AISTATPSPKSTEQT-p A0A087X0R0;S857-p AISTATPSPKSTEQT 0.571899718766607 0.973596765748086 -0.149666666666667 0.00466666666666669 4.46992792811408 0.163195559998459 -0.149666666666667 0.00466666666666669 0.35727876720283 0.963120094372126 -1.00595668114789 0.0484134071441054 A0A087X0R0 NotFound A0A087X0R0.S857.p_NotFound A0A087X0R0_S857s _1_1_857_857 A0A087X0R0 A0A087X0R0|O15550|F8W8R6|F5H6S1|F5H5V6 Lysine-specific demethylase 6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14126.14126.3 19.37 19.37 2.439 10 1 1 0 848.4262 2463.2979 S857s TMT10 839 (K) TDNSVASSPSSAISTATPsPK (S) T(0.0)DNS(0.0)VAS(0.0)S(0.0)PS(0.0)S(0.0)AIS(0.0)T(0.0)AT(0.0)PS(0.99)PK K:TMT10,s:Phosphorylated S KDM6A 159358.2 2 3 2962.1 64.6 HUMAN 1 -4.4699 0.1632 AISVRGDSEEASGAE-p E7EW59;S665-p AISVRGDSEEASGAE 0.490692853704506 0.0244824157611905 -0.105333333333333 0.351 5.69601156054363 21.9378349648788 -0.105333333333333 0.351 0.269400776983836 0.00640053834166212 -1.23021540072383 4.30319428973484 E7EW59 SALL2 E7EW59.S665.p_SALL2 E7EW59_S660sS665sS669s_3_3_660_669 E7EW59 E7EW59 Sal-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27435.27435.4 8.52 8.52 1.84 5 3 3 0 858.6395 3191.6432 S660s S665s S669s TMT10 658 (K) AIsVRGDsEEAsGAEEEVGTVAAAATAGK (E) AIS(0.99)VRGDS(0.99)EEAS(0.99)GAEEEVGT(0.0)VAAAAT(0.0)AGK K:TMT10,s:Phosphorylated S SALL2 96608.7 1 5 179.2 480.48 HUMAN 1 -5.696 21.9378 AITDSELSDEEASIL-p Q8NC44;S311-p AITDSELSDEEASIL 0.898002110206447 0.42521435734187 0.024 0.106333333333333 0.916287972939436 4.94319293393693 0.024 0.106333333333333 0.809787749961442 0.320391294094221 0.25274629014788 1.0934186799693 Q8NC44 FAM134A Q8NC44.S311.p_FAM134A Q8NC44_S311s _1_1_311_311 Q8NC44 Q8NC44 Reticulophagy regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36438.36438.3 28.16 28.16 2.297 8 1 1 0 1093.205 3197.6263 S311s TMT10 299 (K) TALALAITDSELsDEEASILESGGFSVSR (A) T(0.0)ALALAIT(0.0)DS(0.0)ELS(0.99)DEEAS(0.0)ILES(0.0)GGFS(0.0)VS(0.0)R s:Phosphorylated S RETREG2 58171.3 1 2 1304.1 156.18 HUMAN 1 0.9163 4.9432 AITKRKFSPGRPRSK-p Q8NEZ4-3;S836-p AITKRKFSPGRPRSK 0.495901315517715 0.0173572366667531 -0.112333333333333 -0.339666666666667 5.60847234691476 24.2818478642844 -0.112333333333333 -0.339666666666667 0.274886090896653 0.00373091378683174 -1.21448792324188 -4.85832234979398 Q8NEZ4 KMT2C Q8NEZ4.3.S836.p_KMT2C Q8NEZ4-3_S836s _1_1_836_836 Q8NEZ4-3 Q8NEZ4-3 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.3899.3899.3 10.49 10.49 99 1 1 1 0 418.562 1173.7054 S836s Hydrogen 834 (R) KFsPGRPR (S) KFS(1.0)PGRPR K:TMT10-Lys-Only,s:Phosphorylated S KMT2C 554869.1 2 8 88.1 626.31 HUMAN 1 -5.6085 -24.2818 AITLNPKYSLAYFNA-p G3V3A5;Y1747-p AITLNPKYSLAYFNA 0.94478758147709 0.0804080974031953 -0.0123333333333333 0.598 0.486307252472971 14.5226579022683 -0.0123333333333333 0.598 0.894065372378691 0.0352967086191229 -0.139546243250946 2.78764695093995 G3V3A5 NotFound G3V3A5.Y1747.p_NotFound G3V3A5_Y1747yS1748sY1751y_3_3_1747_1751 G3V3A5 G3V3A5|Q3SY87|G5E9W5|Q86TZ1-2 Tetratricopeptide repeat protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4624.4624.5 7.64 3.51 3.302 6 3 3 0 786.9665 3689.8905 Y1747y S1748s Y1751y N1753n TMT10 1736 (K) DYQDAITLNPKysLAyFnAGNIYFHHR (Q) DY(0.0)QDAIT(0.0)LN(0.0)PKY(0.99)S(0.99)LAY(0.99)FN(0.99)AGN(0.0)IY(0.0)FHHR K:TMT10,y:Phosphorylated Y,s:Phosphorylated S,n:Deamidated TTC6 218038 1 2 6180.1 13.39 HUMAN 1 -0.4863 14.5227 AITSLDLSPNGKQLA-p Q8TC44;S27-p AITSLDLSPNGKQLA 0.807399255272832 0.0131932133104267 0.037 -0.385 1.78634925567649 26.168337446007 0.037 -0.385 0.662773406829859 0.00241638569142235 0.46094990623577 -5.33882483789119 Q8TC44 POC1B Q8TC44.S27.p_POC1B Q8TC44_S27s _1_1_27_27 Q8TC44 F8VUJ3|Q8TC44|F8VX21|F8VV91|F8VZB3 POC1 centriolar protein homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21706.21706.3 8.61 8.61 2.953 3 1 1 0 609.0006 1745.0209 S27s TMT10 19 (K) AAITSLDLsPNGK (Q) AAIT(0.0)S(0.0)LDLS(0.99)PNGK K:TMT10,s:Phosphorylated S POC1B 54237.4 1 1 2658.1 74.93 HUMAN 1 1.7863 -26.1683 AITSLDLSPNGKQLG-p F8VUJ3;S27-p AITSLDLSPNGKQLG 0.807399255272832 0.0131932133104267 0.037 -0.385 1.78634925567649 26.168337446007 0.037 -0.385 0.662773406829859 0.00241638569142235 0.46094990623577 -5.33882483789119 F8VUJ3 POC1B-GALNT4 F8VUJ3.S27.p_POC1B-GALNT4 F8VUJ3_S27s _1_1_27_27 F8VUJ3 F8VUJ3|Q8TC44|F8VX21|F8VV91|F8VZB3 Polypeptide N-acetylgalactosaminyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21706.21706.3 8.61 8.61 2.953 3 1 1 0 609.0006 1745.0209 S27s TMT10 19 (K) AAITSLDLsPNGK (Q) AAIT(0.0)S(0.0)LDLS(0.99)PNGK K:TMT10,s:Phosphorylated S POC1B-GALNT4 67035.7 1 2 590.3 264.42 HUMAN 1 1.7863 -26.1683 AITTEQRTDPANSQK-p Q8WUU4;T361-p AITTEQRTDPANSQK 0.126572282263763 0.0224791414705765 -0.466333333333333 -0.803666666666667 18.6170522320955 22.5109435271748 -0.466333333333333 -0.803666666666667 0.0137497492072111 0.0056092609870397 -3.58823921191364 -4.43492646437755 Q8WUU4 ZNF296 Q8WUU4.T361.p_ZNF296 Q8WUU4_T361t _1_1_361_361 Q8WUU4 Q8WUU4|Q8IX33 Zinc finger protein 296 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4448.4448.3 7.04 7.04 1.776 3 1 1 0 594.6461 1701.9536 T361t Hydrogen 361 (R) tDPANSQKASPK (K) T(0.99)DPANS(0.0)QKAS(0.0)PK K:TMT10-Lys-Only,t:Phosphorylated T ZNF296 51836.4 1 4 3351.1 53.13 HUMAN 1 -18.6171 -22.5109 AIYGRNGYDYGQCRL-p Q13242;Y75-p AIYGRNGYDYGQCRL 0.398962840085262 0.132020167415286 -0.228 -0.281666666666667 7.36481435828463 11.5913931520977 -0.228 -0.281666666666667 0.183450358236993 0.0693203401006563 -1.52473295420375 -2.25897938200983 Q13242 SRSF9 Q13242.Y75.p_SRSF9 Q13242_Y75y _1_1_75_75 Q13242 Q13242|S4R3G0 Serine/arginine-rich splicing factor 9 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.5885.5924.2 17.08 13.96 16.033 2 1 1 0 721.2917 1361.6106 Y75y TMT10 73 (R) NGyDYGQCR (L) NGY(0.99)DY(0.0)GQCR C:Carbamidomethylation,y:Phosphorylated Y SRSF9 25655.9 2 2 108.1 27.44 HUMAN 1 -7.3648 -11.5914 AIYKGPGSEAGP___-p P21964;S267-p AIYKGPGSEAGP___ 0.990219796343462 0.150281302231902 0.00233333333333333 -0.171 0.0877703323053047 10.8292793010346 0.00233333333333333 -0.171 0.979992984636493 0.0826175039528664 0.0262576585968626 -2.12528556590483 P21964 COMT P21964.S267.p_COMT P21964_S267s _1_1_267_267 P21964 P21964|P21964-2 Catechol O-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14578.14578.2 13.29 13.29 13.286 2 1 1 0 842.9397 1604.9048 S267s TMT10 260 (K) AIYKGPGsEAGP (-) AIY(0.0)KGPGS(0.99)EAGP K:TMT10,s:Phosphorylated S COMT 30492.9 3 2 5040.1 23.6 HUMAN 1 0.0878 -10.8293 AKAAQQDSDSDGEAL-p Q3YEC7-2;S426-p AKAAQQDSDSDGEAL 0.681251800413115 0.180662341172843 0.076 0.166666666666667 3.12798222804366 9.77429928248023 0.076 0.166666666666667 0.486633247442533 0.105334362638126 0.746289188078382 1.94175852893768 Q3YEC7 RABL6 Q3YEC7.2.S426.p_RABL6 Q3YEC7-2_S426sS428s_2_2_426_428 Q3YEC7-2 Q3YEC7-2 Isoform 2 of Rab-like protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29154.29154.3 14.74 14.74 99 2 2 2 0 1279.8704 3676.6507 S426s S428s N436n TMT10 421 (K) AAQQDsDsDGEALGGnPMVAGFQDDVDLEDQPR (G) AAQQDS(1.0)DS(1.0)DGEALGGN(1.0)PMVAGFQDDVDLEDQPR s:Phosphorylated S,n:Deamidated RABL6 79919.7 1 10 429.1 317.58 HUMAN 1 3.128 9.7743 AKADAECYTAMKIAE-p O94905;Y263-p AKADAECYTAMKIAE 0.82811120087959 0.949375947070868 0.0563333333333333 0.00966666666666668 1.5726389661467 0.323220236096252 0.0563333333333333 0.00966666666666669 0.696203341485155 0.92827782581173 0.411932642270161 0.0942734598271309 O94905 ERLIN2 O94905.Y263.p_ERLIN2 O94905_Y263y _1_1_263_263 O94905 O94905 Erlin-2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12488.12488.3 13.41 9.35 1.118 2 1 1 0 709.3614 2046.0967 Y263y TMT10 256 (K) AKADAECyTAMK (I) AKADAECY(0.99)T(0.0)AMK K:TMT10,C:Carbamidomethylation,y:Phosphorylated Y ERLIN2 38067.1 1 1 259.1 13.41 HUMAN 1 1.5726 0.3232 AKADGIVSKNF____-p P63220;S80-p AKADGIVSKNF____ 0.125798921995959 0.00905862289832238 -0.272666666666667 -0.419333333333333 18.7016713709472 28.9040999986047 -0.272666666666667 -0.419333333333333 0.0134844383763977 0.00128703394127399 -3.6056884901839 -6.09629880853109 P63220 RPS21 P63220.S80.p_RPS21 P63220_S80s _1_1_80_80 P63220 P63220|Q8WVC2 40S ribosomal protein S21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11414.11414.2 10.3 5.15 99 1 1 1 0 614.342 1147.7087 S80s TMT10 75 (K) ADGIVsK (N) ADGIVS(1.0)K K:TMT10,s:Phosphorylated S RPS21 9225.3 1 1 6657.1 10.3 HUMAN 1 -18.7017 -28.9041 AKADSAVSQEQLRKL-p Q9UKS6;S181-p AKADSAVSQEQLRKL 0.192696668893001 0.556378170202772 -0.341666666666667 0.0746666666666667 13.9555818033892 3.43087386866387 -0.341666666666667 0.0746666666666667 0.0402199771624207 0.453850285660849 -2.68476684762198 0.806524752865167 Q9UKS6 PACSIN3 Q9UKS6.S181.p_PACSIN3 Q9UKS6_S181s _1_1_181_181 Q9UKS6 Q9UKS6|E9PIY1 Protein kinase C and casein kinase substrate in neurons protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8743.8743.3 9.35 9.35 2.289 2 1 1 0 623.9984 1790.0172 S181s TMT10 176 (K) ADSAVsQEQLRK (L) ADS(0.0)AVS(0.99)QEQLRK K:TMT10,s:Phosphorylated S PACSIN3 48828.3 1 2 547.1 275.62 HUMAN 1 -13.9556 3.4309 AKAEQHNYPGIKLQI-p Q8IYA6;Y659-p AKAEQHNYPGIKLQI 0.985102205736535 0.873011078780711 0.0286666666666667 0.0323333333333333 0.130868697793033 0.831547216289198 0.0286666666666668 0.0323333333333333 0.970315860345941 0.825743717946148 0.0389645092622797 0.231050876327968 Q8IYA6 CKAP2L Q8IYA6.Y659.p_CKAP2L Q8IYA6_Y659y _1_1_659_659 Q8IYA6 Q8IYA6|Q8IYA6-3|Q8IYA6-2 Cytoskeleton-associated protein 2-like GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8855.8855.3 7.48 7.48 99 1 1 1 0 565.6274 1614.9004 Y659y TMT10 654 (K) AEQHNyPGIK (L) AEQHNY(1.0)PGIK K:TMT10,y:Phosphorylated Y CKAP2L 84155.7 1 1 432.1 7.48 HUMAN 1 0.1309 0.8315 AKAKSEDSDVELSD_-p Q5VZL5;S1542-p AKAKSEDSDVELSD_ 0.88461853691899 0.0719325711367448 -0.028 0.218333333333333 1.05165205830192 15.1905895795176 -0.028 0.218333333333333 0.784936987402653 0.0302650253523863 -0.286785086290088 2.91234331072431 Q5VZL5 ZMYM4 Q5VZL5.S1542.p_ZMYM4 Q5VZL5_S1542sS1547s_2_2_1542_1547 Q5VZL5 Q5VZL5|Q5VZL5-4|Q5VZL5-2|Q5VZL5-3 Zinc finger MYM-type protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11922.11922.2 11.14 11.14 3.602 3 2 2 0 956.9156 1752.8904 S1542s S1547s TMT10 1537 (K) AKSEDsDVELsD (-) AKS(0.0)EDS(0.99)DVELS(0.99)D K:TMT10,s:Phosphorylated S ZMYM4 176265.3 3 21 535.1 278.69 HUMAN 1 -1.0517 15.1906 AKALPCQSPDPELEA-p O15534;S592-p AKALPCQSPDPELEA 0.359303431492826 0.349511122055786 0.141 0.104333333333333 8.26067479298886 6.05356002267104 0.141 0.104333333333333 0.149256248193778 0.248109845177886 1.68035307481978 1.29378889321143 O15534 PER1 O15534.S592.p_PER1 O15534_S592s _1_1_592_592 O15534 O15534|J3KRL7|O15534-4|J3KTM2 Period circadian protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27450.27450.4 27.83 26.86 4.245 2 1 1 0 977.7536 3828.0254 S592s TMT10 587 (K) ALPCQsPDPELEAGSAPVQAPLALVPEEAERK (E) ALPCQS(0.99)PDPELEAGS(0.0)APVQAPLALVPEEAERK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PER1 137749.7 4 2 1981.1 104.28 HUMAN 1 8.2607 6.0536 AKASNTSTPTKGNTE-p Q14004-2;T494-p AKASNTSTPTKGNTE 0.156450973477083 0.00172752646433129 0.392333333333333 -1.26066666666667 16.1658222697147 43.7054226978359 0.392333333333333 -1.26066666666667 0.0241778552413973 4.26047214485812e-05 3.10009497104969 -11.9304831988251 Q14004 CDK13 Q14004.2.T494.p_CDK13 Q14004-2_T494t _1_1_494_494 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5741.5741.4 16.9 13.35 1.106 11 1 1 0 822.4182 3206.6856 T494t TMT10 489 (K) ASNTStPTKGNTETSASASQTNHVK (D) AS(0.0)NT(0.0)S(0.0)T(0.99)PT(0.0)KGNT(0.0)ET(0.0)S(0.0)AS(0.0)AS(0.0)QT(0.0)NHVK K:TMT10,t:Phosphorylated T CDK13 159173.6 3 8 145.1 520.12 HUMAN 1 16.1658 -43.7054 AKCLASPSLNPGNES-p Q8TD26;S1814-p AKCLASPSLNPGNES 0.914868730759797 0.945818175866251 0.0233333333333333 0.00766666666666669 0.757075173564782 0.34713558504319 0.0233333333333333 0.00766666666666671 0.840025524839617 0.923180115309165 0.211781803415977 0.10100013985332 Q8TD26 CHD6 Q8TD26.S1814.p_CHD6 Q8TD26_S1814s_1_1_1814_1814 Q8TD26 Q8TD26 Chromodomain-helicase-DNA-binding protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24763.24763.3 11.71 11.71 0.092 6 1 1 0 1209.5573 3545.6897 S1814s N1816n TMT10 1809 (K) CLASPsLnPGNESGFVDMCSLSVCDSKR (N) CLAS(0.0)PS(0.99)LN(0.50)PGN(0.50)ES(0.0)GFVDMCS(0.0)LS(0.0)VCDS(0.0)KR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated CHD6 308259.4 1 8 1006.1 189.22 HUMAN 1 0.7571 0.3471 AKCTGDFSPSPEKLV-p Q5VWN6;S1539-p AKCTGDFSPSPEKLV 0.163512600140645 0.00273807456007999 1.02533333333333 -0.941666666666667 15.7528413563145 38.8410580962023 1.02533333333333 -0.941666666666667 0.0265898485914464 0.000130585269709587 3.02087578538172 -9.62210927721737 Q5VWN6 FAM208B Q5VWN6.S1539.p_FAM208B Q5VWN6_S1539sS1541s_2_2_1539_1541 Q5VWN6 Q5VWN6|Q5VWN6-2 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13897.13905.3 9.54 9.54 9.539 3 2 2 0 614.9311 1682.846 S1539s S1541s TMT10 1534 (K) CTGDFsPsPEK (L) CT(0.0)GDFS(0.99)PS(0.99)PEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM208B 271861.7 3 20 275.1 391.61 HUMAN 1 15.7528 -38.8411 AKDALFASQEKFFQE-p P40855;S66-p AKDALFASQEKFFQE 0.507257244966867 0.00660858800328804 0.106333333333333 0.517333333333333 5.43686468734985 31.3285477496364 0.106333333333333 0.517333333333333 0.285965427547067 0.000736453321162964 1.18354761623532 6.83527362887048 P40855 PEX19 P40855.S66.p_PEX19 P40855_S66s _1_1_66_66 P40855 P40855|P40855-5|B7Z8B3|E9PS71 Peroxisomal biogenesis factor 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16728.16728.2 12.6 7.76 99 1 1 1 0 773.9009 1466.8255 S66s TMT10 61 (K) DALFAsQEK (F) DALFAS(1.0)QEK K:TMT10,s:Phosphorylated S PEX19 33091.2 2 4 2146.1 95.84 HUMAN 1 5.4369 31.3285 AKDCDPGSPRRCDII-p Q00341;S944-p AKDCDPGSPRRCDII 0.977130047691108 0.0638778191498856 0.00466666666666667 -0.292666666666667 0.197351479570015 15.9045345085958 0.00466666666666667 -0.292666666666667 0.955575160491472 0.0256771340949996 0.0583353949235267 -3.04774367527164 Q00341 HDLBP Q00341.S944.p_HDLBP Q00341_S944s _1_1_944_944 Q00341 Q00341|A0A024R4E5|Q00341-2 Vigilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12996.12996.4 16.09 11.31 8.425 2 1 1 0 599.7917 2316.175 S944s TMT10 939 (K) DCDPGsPRRCDIIIISGR (K) DCDPGS(0.99)PRRCDIIIIS(0.0)GR C:Carbamidomethylation,s:Phosphorylated S HDLBP 142080.7 13 7 775.1 227.26 HUMAN 1 0.1974 -15.9045 AKDIDISSPEFKIKI-p Q09666;S177-p AKDIDISSPEFKIKI 0.175496488250389 0.0302679073044268 0.714 -0.91 15.0346430943259 20.5477936399962 0.714 -0.91 0.0313715293257644 0.00881496588773477 2.88495104245272 -3.99364318722147 Q09666 AHNAK Q09666.S177.p_AHNAK Q09666_S177s _1_1_177_177 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21307.21307.2 11.25 7.12 1.105 2 1 1 0 844.9321 1608.8885 S177s TMT10 172 (K) DIDISsPEFK (I) DIDIS(0.0)S(0.99)PEFK K:TMT10,s:Phosphorylated S AHNAK 629603.7 23 7 1.1 4313.36 HUMAN 1 15.0346 -20.5478 AKDLLHPSPEEEKRK-p P42677;S11-p AKDLLHPSPEEEKRK 0.294739372973382 0.0103756825657344 0.331666666666667 -0.414666666666667 10.0126121446066 27.8516406056731 0.331666666666667 -0.414666666666667 0.0997100159068573 0.00163997013544714 1.98390170359138 -5.79586017550931 P42677 RPS27 P42677.S11.p_RPS27 P42677_S11s _1_1_11_11 P42677 P42677|Q5T4L4 40S ribosomal protein S27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14090.14090.3 16.53 16.53 99 1 1 1 0 611.3142 1751.958 S11s TMT10 6 (K) DLLHPsPEEEK (R) DLLHPS(1.0)PEEEK K:TMT10,s:Phosphorylated S RPS27 9803.3 5 1 3354.1 53.07 HUMAN 1 10.0126 -27.8516 AKEEKEESDDEAAVE-p P14625;S306-p AKEEKEESDDEAAVE 0.560051792492857 0.268861303835123 -0.139333333333333 0.315 4.64594910361974 7.51258703675909 -0.139333333333333 0.315 0.343087653506984 0.177313293359407 -1.03875763504264 1.55001344170699 P14625 HSP90B1 P14625.S306.p_HSP90B1 P14625_S306s _1_1_306_306 P14625 P14625 Endoplasmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13097.13097.4 22.72 22.72 99 1 1 1 0 804.9018 3136.6191 S306s TMT10 304 (K) EEsDDEAAVEEEEEEKKPK (T) EES(1.0)DDEAAVEEEEEEKKPK K:TMT10,s:Phosphorylated S HSP90B1 92752.5 4 44 43.3 810.87 HUMAN 1 -4.6459 7.5126 AKEESEESDEDMGFG-p P05388;S307-p AKEESEESDEDMGFG 0.586589336715805 0.0106218169506843 -0.0973333333333334 0.501333333333333 4.26290789680351 27.6829805049718 -0.0973333333333334 0.501333333333333 0.374722016364058 0.00170491192914827 -0.967062779047882 5.74879139843304 P05388 RPLP0 P05388.S307.p_RPLP0 P05388_S307s _1_1_307_307 P05388 P05388|Q8NHW5|F8VWS0|P05388-2|F8W1K8 60S acidic ribosomal protein P0 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29336.29336.2 16.43 16.43 2.302 2 1 1 0 1401.1041 2721.2489 S307s TMT10 298 (K) VEAKEESEEsDEDMGFGLFD (-) VEAKEES(0.0)EES(0.99)DEDMGFGLFD K:TMT10,s:Phosphorylated S RPLP0 34444.1 40 3 2659.1 74.88 HUMAN 1 -4.2629 27.683 AKEGRNVYSSSRYDD-p O75494;Y105-p AKEGRNVYSSSRYDD 0.393345269553125 0.124072231451728 0.215 0.210333333333333 7.47554787519039 11.958515395529 0.215 0.210333333333333 0.178831991308982 0.0637013242090792 1.54402503018823 2.32382376183701 O75494 SRSF10 O75494.Y105.p_SRSF10 O75494_Y105y _1_1_105_105 O75494 O75494|O75494-2|O75494-3 Serine/arginine-rich splicing factor 10 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.4647.4647.2 12.87 4.88 1.656 4 1 1 0 561.263 1041.5526 Y105y TMT10 103 (R) NVySSSR (Y) NVY(0.99)S(0.0)S(0.0)S(0.0)R y:Phosphorylated Y SRSF10 31357 1 1 274.1 12.87 HUMAN 1 7.4755 11.9585 AKEIEMASEERPPAQ-p E7EVA0;S247-p AKEIEMASEERPPAQ 0.116062997359113 0.350537128992444 -0.292 -0.0923333333333333 19.47437420783 6.03539233550337 -0.292 -0.0923333333333334 0.0112865855870609 0.249149928255939 -3.76704242080705 -1.29055728988431 E7EVA0 NotFound E7EVA0.S247.p_NotFound E7EVA0_S247s _1_1_247_247 E7EVA0 E7EVA0 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.33635.33635.3 11.51 11.51 99 1 1 1 0 1004.5087 2931.5394 S247s TMT10 242 (K) EIEMAsEERPPAQALEIMMGLK (T) EIEMAS(1.0)EERPPAQALEIMMGLK K:TMT10,s:Phosphorylated S MAP4 246695.2 1 6 38.1 865.62 HUMAN 1 -19.4744 -6.0354 AKEKGIGTPQPDVAK-p Q9Y6X8;T37-p AKEKGIGTPQPDVAK 0.149162361488821 0.0126478671617105 -0.337666666666667 0.626 16.6655094847035 26.4595751330551 -0.337666666666667 0.626 0.0215500881778123 0.00225965681989359 -3.19704122811757 5.41591689775936 Q9Y6X8 ZHX2 Q9Y6X8.T37.p_ZHX2 Q9Y6X8_T37t _1_1_37_37 Q9Y6X8 Q9Y6X8 Zinc fingers and homeoboxes protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13184.13184.3 11.16 11.16 99 1 1 1 0 540.9649 1540.9099 T37t TMT10 34 (K) GIGtPQPDVAK (D) GIGT(1.0)PQPDVAK K:TMT10,t:Phosphorylated T ZHX2 92990 1 1 2740.1 72.17 HUMAN 1 -16.6655 26.4596 AKENENSSPVAGAFG-p Q9NRY5;S146-p AKENENSSPVAGAFG 0.0259576927761844 0.00129606731851265 -0.850666666666667 -0.976666666666667 36.78722097385 47.1240104888275 -0.850666666666667 -0.976666666666667 0.000209545289554751 1.93909439542129e-05 -8.79423722000199 -13.851515729566 Q9NRY5 FAM114A2 Q9NRY5.S146.p_FAM114A2 Q9NRY5_S146s_1_1_146_146 Q9NRY5 Q9NRY5|E7ESJ7 Protein FAM114A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35146.35146.5 13.6 13.6 1.174 10 1 1 0 878.2427 4306.2446 N142n S146s TMT10 132 (K) YVAGETNAKEnENSsPVAGAFGVFSTISTAVQSTGK (S) Y(0.0)VAGET(0.0)N(0.0)AKEN(0.99)EN(0.0)S(0.0)S(0.99)PVAGAFGVFS(0.0)T(0.0)IS(0.0)T(0.0)AVQS(0.0)T(0.0)GK K:TMT10,n:Deamidated,s:Phosphorylated S FAM114A2 55752.5 13 3 1989.1 103.91 HUMAN 1 -36.7872 -47.124 AKENGDLSPFSGTSL-p P19174;S1221-p AKENGDLSPFSGTSL 0.321147629956861 0.0833980203499879 -0.226333333333333 -0.344 9.2386642737788 14.2809069995646 -0.226333333333333 -0.344 0.11916084455415 0.03731722147418 -1.84968495831833 -2.74295527145392 P19174 PLCG1 P19174.S1221.p_PLCG1 P19174_S1221s _1_1_1221_1221 P19174 P19174 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18790.18790.3 13.36 9.88 13.36 4 1 1 0 596.9528 1708.8703 S1221s TMT10 1216 (K) ENGDLsPFSGTSLR (E) ENGDLS(0.99)PFS(0.0)GT(0.0)S(0.0)LR s:Phosphorylated S PLCG1 149841.6 2 1 1779.2 115.42 HUMAN 1 -9.2387 -14.2809 AKENSEESGEFDDLV-p Q9Y4D1;S1030-p AKENSEESGEFDDLV 0.102471104147839 0.0983393223723203 -0.317 -0.180666666666667 20.928085248101 13.3156030753651 -0.317 -0.180666666666667 0.0080759100888818 0.0466057705227741 -4.08101934017354 -2.56664619648205 Q9Y4D1 DAAM1 Q9Y4D1.S1030.p_DAAM1 Q9Y4D1_S1030s _1_1_1030_1030 Q9Y4D1 Q9Y4D1|Q9Y4D1-2 Disheveled-associated activator of morphogenesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24880.24880.4 19.48 19.48 3.96 3 1 1 0 659.3226 2554.3037 S1030s TMT10 1023 (K) AKENSEEsGEFDDLVSALR (S) AKENS(0.0)EES(0.99)GEFDDLVS(0.0)ALR K:TMT10,s:Phosphorylated S DAAM1 124041.8 4 6 2038.1 101.28 HUMAN 1 -20.9281 -13.3156 AKEVELVSE______-p O60832;S513-p AKEVELVSE______ 0.368479250934454 0.895004194622648 0.126666666666667 -0.0136666666666666 8.03864914824293 0.675984015815851 0.126666666666667 -0.0136666666666666 0.157085133398114 0.855857771194774 1.64186456168308 -0.190485483381052 O60832 DKC1 O60832.S513.p_DKC1 O60832_S513s _1_1_513_513 O60832 O60832 H/ACA ribonucleoprotein complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14869.15315.2 14.3 10.65 99 1 1 1 0 771.4153 1461.8565 S513s TMT10 506 (K) AKEVELVsE (-) AKEVELVS(1.0)E K:TMT10,s:Phosphorylated S DKC1 58129.5 10 7 363.1 342.61 HUMAN 1 8.0386 -0.676 AKGNKSPSPPDGSPA-p O00499;S298-p AKGNKSPSPPDGSPA 0.53706412572523 0.733557625532516 0.102333333333333 0.034 4.99213244142287 1.8555791134135 0.102333333333333 0.034 0.316801154692054 0.652292054798505 1.10261613002566 0.476522134998817 O00499 BIN1 O00499.S298.p_BIN1 O00499_S298s _1_1_298_298 O00499 O00499|O00499-5|O00499-2|O00499-3|O00499-11|O00499-6|O00499-4|O00499-8|O00499-7|O00499-10|O00499-9 Myc box-dependent-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10598.10598.3 14.22 10.61 2.576 4 1 1 0 806.081 2336.261 S298s TMT10 293 (K) GNKSPsPPDGSPAATPEIR (V) GNKS(0.0)PS(0.99)PPDGS(0.0)PAAT(0.0)PEIR K:TMT10,s:Phosphorylated S BIN1 64926.4 4 1 2956.1 64.78 HUMAN 1 4.9921 1.8556 AKGNVLNSPEDQKNS-p Q8IYD8;S1437-p AKGNVLNSPEDQKNS 0.110631198359183 0.00365717809521853 -0.520666666666667 -0.665 20.0126851595502 36.1838310837064 -0.520666666666667 -0.665 0.00997083395650466 0.00024077804930025 -3.88167326779093 -8.54040466299537 Q8IYD8 FANCM Q8IYD8.S1437.p_FANCM Q8IYD8_S1437s _1_1_1437_1437 Q8IYD8 Q8IYD8|Q8IYD8-3 Fanconi anemia group M protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11501.11501.2 13.61 13.61 99 1 1 1 0 869.9417 1658.9114 S1437s TMT10 1432 (K) GNVLNsPEDQK (N) GNVLNS(1.0)PEDQK K:TMT10,s:Phosphorylated S FANCM 234983 3 4 2500.1 81.07 HUMAN 1 -20.0127 -36.1838 AKGRQNISPDKIPWS-p Q14204;S4234-p AKGRQNISPDKIPWS 0.185461409283341 0.498466622770518 0.356 -0.0883333333333333 14.3830358676157 4.04574649332672 0.356 -0.0883333333333333 0.0364499060484389 0.393935709618051 2.76351989959049 -0.925705929606253 Q14204 DYNC1H1 Q14204.S4234.p_DYNC1H1 Q14204_S4234s _1_1_4234_4234 Q14204 Q14204 Cytoplasmic dynein 1 heavy chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25324.25324.3 9.25 6.37 3.754 2 1 1 0 788.7823 2284.3632 S4234s TMT10 4231 (R) QNIsPDKIPWSALK (T) QNIS(0.99)PDKIPWS(0.0)ALK K:TMT10,s:Phosphorylated S DYNC1H1 535136.6 1 8 1294.1 156.82 HUMAN 1 14.383 -4.0457 AKGSPKGSPSRHSRA-p K7EKI0;S27-p AKGSPKGSPSRHSRA 0.0611233751023293 0.0202576394847618 0.688 -0.449 26.486218847023 23.1877751874498 0.688 -0.449 0.00224583639378149 0.00479979270417096 5.4303089261555 -4.5937587782867 K7EKI0 EVPL K7EKI0.S27.p_EVPL K7EKI0_S27sS29s_2_2_27_29 K7EKI0 K7EKI0|Q92817 Envoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5069.5280.4 8.3 8.3 1.812 4 2 2 0 540.784 2000.1856 S27s S29s TMT10 17 (K) GSPAKGSPKGsPsR (H) GS(0.0)PAKGS(0.0)PKGS(0.99)PS(0.99)R K:TMT10,s:Phosphorylated S EVPL 235195.7 3 12 1436.1 142.57 HUMAN 1 26.4862 -23.1878 AKHKAPGSADYGFAP-p Q5T0Z8;S1139-p AKHKAPGSADYGFAP 0.886027178849554 0.0263681512688514 -0.021 -0.445666666666667 1.02908804256492 21.4429805078724 -0.021 -0.445666666666667 0.789025784560557 0.00717301847163899 -0.281159025091601 -4.19141390042462 Q5T0Z8 C6orf132 Q5T0Z8.S1139.p_C6orf132 Q5T0Z8_S1139s _1_1_1139_1139 Q5T0Z8 Q5T0Z8 Uncharacterized protein C6orf132 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9777.9777.3 14.94 14.94 7.844 2 1 1 0 737.7078 2131.1449 S1139s TMT10 1134 (K) HKAPGsADYGFAPAAGR (S) HKAPGS(0.99)ADY(0.0)GFAPAAGR K:TMT10,s:Phosphorylated S C6orf132 124488.2 1 20 336.1 355.09 HUMAN 1 -1.0291 -21.443 AKHPCNASMECDKCQ-p Q9Y3S2;S39-p AKHPCNASMECDKCQ 0.84768925371821 0.649371940473854 -0.0406666666666667 0.057 1.39029899081185 2.55768621008868 -0.0406666666666667 0.0570000000000001 0.726055970261519 0.554921279524329 -0.369105428810704 0.628965742642981 Q9Y3S2 ZNF330 Q9Y3S2.S39.p_ZNF330 Q9Y3S2_S39s _1_1_39_39 Q9Y3S2 Q9Y3S2|D6RCK7 Zinc finger protein 330 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5702.5702.3 13.55 13.55 99 1 1 1 0 629.6058 1806.8337 S39s TMT10 34 (K) HPCNAsMECDK (C) HPCNAS(1.0)MECDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF330 37855.2 1 1 4301.1 34.03 HUMAN 1 -1.3903 2.5577 AKHRRSHSGLKPFVC-p Q6DD87;S173-p AKHRRSHSGLKPFVC 0.192286812023323 0.00363392930998064 -0.242333333333333 -0.798333333333333 13.9752311509751 36.2584488071309 -0.242333333333333 -0.798333333333334 0.0400384157525262 0.000236676489663311 -2.68837200771962 -8.56923731371115 Q6DD87 ZNF787 Q6DD87.S173.p_ZNF787 Q6DD87_S173s _1_1_173_173 Q6DD87 Q6DD87|A0A087WUD1 Zinc finger protein 787 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11983.11983.3 11.93 11.93 1.101 2 1 1 0 641.675 1843.0413 S173s TMT10 171 (R) SHsGLKPFVCPR (C) S(0.0)HS(0.99)GLKPFVCPR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF787 41569.7 1 4 3245.1 56.11 HUMAN 1 -13.9752 -36.2584 AKIPSARSLDEIAMD-p Q9Y2L6;S372-p AKIPSARSLDEIAMD 0.990095172213355 0.859418919060935 0.00299999999999998 0.0223333333333334 0.0895591468015457 0.927106926010097 0.00300000000000001 0.0223333333333334 0.979589418679966 0.807772952973125 0.026787456295293 0.255467755846905 Q9Y2L6 FRMD4B Q9Y2L6.S372.p_FRMD4B Q9Y2L6_S372s _1_1_372_372 Q9Y2L6 Q9Y2L6 FERM domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29434.29434.3 15.07 15.07 15.075 4 1 1 0 696.9961 2009.0059 S372s TMT10 372 (R) sLDEIAMDLTETGTQR (A) S(0.99)LDEIAMDLT(0.0)ET(0.0)GT(0.0)QR s:Phosphorylated S FRMD4B 118900.4 2 1 1893.1 108.71 HUMAN 1 0.0896 0.9271 AKKAEQGSEEEGEGE-p Q8NE71;S228-p AKKAEQGSEEEGEGE 0.244161971200343 0.238024491086488 -0.192 0.122333333333333 11.7119849765426 8.21100589056681 -0.192 0.122333333333333 0.067421979988654 0.150973043765831 -2.28135049252487 1.6712014797277 Q8NE71 ABCF1 Q8NE71.S228.p_ABCF1 Q8NE71_S228s _1_1_228_228 Q8NE71 Q8NE71 ATP-binding cassette sub-family F member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11760.11760.5 27.5 24.08 6.053 4 1 1 0 916.0273 4496.1519 S228s TMT10 223 (K) KAEQGsEEEGEGEEEEEEGGESKADDPYAHLSK (K) KAEQGS(0.99)EEEGEGEEEEEEGGES(0.0)KADDPY(0.0)AHLS(0.0)K K:TMT10,s:Phosphorylated S ABCF1 96380.4 14 5 203.1 449.36 HUMAN 1 -11.712 8.211 AKKAKADSPVNGLPK-p Q96S94;S369-p AKKAKADSPVNGLPK 0.801434754280439 0.472835497008176 0.036 -0.0713333333333333 1.85109056137932 4.33696581412098 0.036 -0.0713333333333333 0.652966564947195 0.368386255753051 0.475566481935966 -0.980840832192758 Q96S94 CCNL2 Q96S94.S369.p_CCNL2 Q96S94_S369s _1_1_369_369 Q96S94 Q96S94|A0A0A0MSF3|Q96S94-3 Cyclin-L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12852.12852.2 14.68 9.92 99 1 1 1 0 982.562 1884.1522 S369s TMT10 365 (K) AKADsPVNGLPK (G) AKADS(1.0)PVNGLPK K:TMT10,s:Phosphorylated S CCNL2 58659.8 16 4 2007.1 102.73 HUMAN 1 1.8511 -4.337 AKKGLTPSQIGVILR-p P62277;S48-p AKKGLTPSQIGVILR 0.39901938589383 0.542983098700078 0.114333333333333 -0.0596666666666667 7.36080061370116 3.56761917572094 0.114333333333333 -0.0596666666666667 0.183619981216706 0.439782640430351 1.52403328682055 -0.833391086108967 P62277 RPS13 P62277.S48.p_RPS13 P62277_S48s _1_1_48_48 P62277 P62277 40S ribosomal protein S13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29248.29248.2 7.28 7.28 1.832 2 1 1 0 781.9471 1482.9205 S48s TMT10 44 (K) GLTPsQIGVILR (D) GLT(0.0)PS(0.99)QIGVILR s:Phosphorylated S RPS13 17222 2 4 3268.1 55.43 HUMAN 1 7.3608 -3.5676 AKKIHFRTPPL____-p Q96JH8;T1072-p AKKIHFRTPPL____ 0.615512370517762 0.456394804849497 -0.0696666666666667 0.123 3.91055773559268 4.54270230113344 -0.0696666666666667 0.123 0.406391135696233 0.351341757880311 -0.899993590037813 1.01935641734204 Q96JH8 RADIL Q96JH8.T1072.p_RADIL Q96JH8_T1072t _1_1_1072_1072 Q96JH8 Q96JH8 Ras-associating and dilute domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15264.15264.3 8.12 8.12 99 1 1 1 0 549.6572 1566.9884 T1072t TMT10 1067 (K) KIHFRtPPL (-) KIHFRT(1.0)PPL K:TMT10,t:Phosphorylated T RADIL 118765.4 1 7 1785.1 114.97 HUMAN 1 -3.9106 4.5427 AKKIKLQTPNTFPKR-p Q14978-3;T608-p AKKIKLQTPNTFPKR 0.638563824318686 0.0024566326560057 0.07 -0.707666666666667 3.63371356493988 40.0005662200348 0.07 -0.707666666666666 0.433140350375287 9.99869631517573e-05 0.846432366031844 -10.1316165666462 Q14978 NOLC1 Q14978.3.T608.p_NOLC1 Q14978-3_T608t _1_1_608_608 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19579.19579.3 12.75 12.75 1.189 2 1 1 0 685.4064 1974.2355 T608t TMT10 604 (K) IKLQtPNTFPK (R) IKLQT(0.99)PNT(0.0)FPK K:TMT10,t:Phosphorylated T NOLC1 73744 2 18 72.1 655.55 HUMAN 1 3.6337 -40.0006 AKKKEEPSQNDISPK-p Q9NR30;S84-p AKKKEEPSQNDISPK 0.877218384670569 0.244688371371848 -0.0316666666666667 0.305666666666667 1.11715226613845 8.05674606312447 -0.0316666666666667 0.305666666666667 0.773187409457889 0.156431926464452 -0.303012071885723 1.64447800074779 Q9NR30 DDX21 Q9NR30.S84.p_DDX21 Q9NR30_S84sS89s_2_2_84_89 Q9NR30 Q9NR30|Q9NR30-2 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8929.8929.4 8.42 6.65 99 2 2 2 0 644.843 2416.4217 S84s S89s TMT10 79 (K) KKEEPsQNDIsPK (T) KKEEPS(1.0)QNDIS(1.0)PK K:TMT10,s:Phosphorylated S DDX21 87856.3 1 26 103.1 590.75 HUMAN 1 -1.1172 8.0567 AKKKGEMTAEERSQF-p B7Z6D5;T664-p AKKKGEMTAEERSQF 0.868623846817546 0.0320619890330899 0.095 -0.419666666666667 1.19449439282748 20.1738857521556 0.0949999999999999 -0.419666666666667 0.759539843418105 0.0096075228222344 0.321978085921307 -3.91266594922729 B7Z6D5 NotFound B7Z6D5.T664.p_NotFound B7Z6D5_T664t _1_1_664_664 B7Z6D5 Q96GQ7|B7Z6D5 Probable ATP-dependent RNA helicase DDX27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.4849.4849.4 8.92 8.92 99 1 1 1 0 487.2651 1866.0722 T664t TMT10 659 (K) KKGEMtAEER (S) KKGEMT(1.0)AEER K:TMT10,t:Phosphorylated T DDX27 87002.4 2 5 2685.1 73.99 HUMAN 1 1.1945 -20.1739 AKKKLAATPKKAKKP-p P07305;T153-p AKKKLAATPKKAKKP 0.045879533129693 0.000952253650599092 -0.586666666666667 -1.646 29.7522453770382 58.6542978880344 -0.586666666666667 -1.646 0.00105870621436282 1.36323337859149e-06 -6.35709641600072 -22.77378358725 P07305 H1F0 P07305.T153.p_H1F0 P07305_T153t _1_1_153_153 P07305 P07305|P07305-2 Histone H1.0 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8765.8765.3 9.91 4.64 99 1 1 1 0 618.3989 1773.2132 T153t TMT10 149 (K) KLAAtPKK (A) KLAAT(1.0)PKK K:TMT10,t:Phosphorylated T H1F0 20862.5 8 6 2948.1 64.98 HUMAN 1 -29.7522 -58.6543 AKKKYIESPDVEKEV-p Q15545;S159-p AKKKYIESPDVEKEV 0.182149770013788 0.481180945781245 -0.237666666666667 0.0683333333333333 14.5567299075677 4.24084659858564 -0.237666666666667 0.0683333333333333 0.0350208763281153 0.37663037281009 -2.79572151943132 0.962726326492776 Q15545 TAF7 Q15545.S159.p_TAF7 Q15545_S159s _1_1_159_159 Q15545 Q15545 Transcription initiation factor TFIID subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13520.13520.3 8.99 8.99 8.99 2 1 1 0 659.0309 1895.1093 S159s TMT10 155 (K) KYIEsPDVEK (E) KY(0.0)IES(0.99)PDVEK K:TMT10,s:Phosphorylated S TAF7 40372.5 3 1 1709.1 120.05 HUMAN 1 -14.5567 4.2408 AKKPAGATPKKAKKA-p P16401;T138-p AKKPAGATPKKAKKA 0.41481183377626 0.00119413965069809 0.159666666666667 -1.73333333333333 7.04968546141251 48.1795915186182 0.159666666666667 -1.73333333333333 0.197256559437213 1.52069055355452e-05 1.46970761780112 -14.5017035711721 P16401 HIST1H1B P16401.T138.p_HIST1H1B P16401_T138t _1_1_138_138 P16401 P16401 Histone H1.5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6908.6908.3 8.94 8.94 99 1 1 1 0 512.9759 1456.9455 T138t TMT10 133 (K) KPAGAtPK (K) KPAGAT(1.0)PK K:TMT10,t:Phosphorylated T HIST1H1B 22579.8 8 10 738.2 234.77 HUMAN 1 7.0497 -48.1796 AKKPRKCSLCHQPGH-p Q13472;S985-p AKKPRKCSLCHQPGH 0.283045508301742 0.0302350363028939 -0.237666666666667 -0.542333333333333 10.3628261406593 20.5569565713573 -0.237666666666667 -0.542333333333333 0.0919850790544525 0.00879638730024399 -2.04482233036232 -3.995639416869 Q13472 TOP3A Q13472.S985.p_TOP3A Q13472_S985s _1_1_985_985 Q13472 Q13472|Q13472-2|Q13472-3 DNA topoisomerase 3-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5472.5472.5 13.67 7.88 13.669 2 1 1 0 584.4825 2838.4227 S985s TMT10 983 (R) KCsLCHQPGHTRPFCPQNR (-) KCS(0.99)LCHQPGHT(0.0)RPFCPQNR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TOP3A 114310.2 1 2 5180.1 22.1 HUMAN 1 -10.3628 -20.557 AKKQGPVSPGPAPPP-p P29375;S1666-p AKKQGPVSPGPAPPP 0.911753399332893 0.192447122427716 -0.0176666666666667 0.133333333333333 0.780952094990505 9.4090605503145 -0.0176666666666667 0.133333333333333 0.835419850753591 0.114576076135124 -0.217992470481753 1.87849039315664 P29375 KDM5A P29375.S1666.p_KDM5A P29375_S1666s _1_1_1666_1666 P29375 P29375 Lysine-specific demethylase 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29369.29369.5 24.08 24.08 12.347 4 1 1 0 782.4347 3828.1614 S1666s TMT10 1661 (K) KQGPVsPGPAPPPSFIMSYKLPMEDLK (E) KQGPVS(0.99)PGPAPPPS(0.0)FIMS(0.0)Y(0.0)KLPMEDLK K:TMT10,s:Phosphorylated S KDM5A 194944.7 19 10 446.1 309.57 HUMAN 1 -0.781 9.4091 AKKRRTASPPALPKI-p Q13029;S643-p AKKRRTASPPALPKI 0.862862636836978 0.580305896452006 0.0256666666666667 0.0653333333333334 1.24909811507965 3.18880846879793 0.0256666666666667 0.0653333333333334 0.75004995354213 0.479865086458087 0.335245535109657 0.758396978722256 Q13029 PRDM2 Q13029.S643.p_PRDM2 Q13029_S643s _1_1_643_643 Q13029 Q13029|Q13029-2|Q13029-3|Q13029-5 PR domain zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15067.15067.2 14.67 10.49 2.847 2 1 1 0 710.4037 1339.835 S643s TMT10 641 (R) TAsPPALPK (I) T(0.0)AS(0.99)PPALPK K:TMT10,s:Phosphorylated S PRDM2 191251.2 6 3 1106.1 176.67 HUMAN 1 1.2491 3.1888 AKKSRVVSDADDSDS-p Q96ST2;S415-p AKKSRVVSDADDSDS 0.331074010334231 0.0767204882627842 0.175833333333333 -0.208833333333333 8.96925437858338 14.796269858048 0.175833333333333 -0.208833333333333 0.126786952220894 0.0331415651158059 1.80304051963756 -2.83850657017789 Q96ST2 IWS1 Q96ST2.S415.p_IWS1 Q96ST2_S415sS420s_2_2_415_420 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14189.14189.2 10.13 10.13 1.218 4 2 2 0 1121.9803 2083.0079 S415s S420s TMT10 413 (R) VVsDADDsDSDAVSDK (S) VVS(0.99)DADDS(0.99)DS(0.0)DAVS(0.0)DK K:TMT10,s:Phosphorylated S IWS1 92010 3 17 230.1 422.87 HUMAN 2 8.9693 -14.7963 AKKTTQRSREDLSAL-p O95049-3;S610-p AKKTTQRSREDLSAL 0.574777890570195 0.541641847820842 0.136333333333333 -0.174333333333333 4.42169131520568 3.58260210219462 0.136333333333333 -0.174333333333333 0.361269142687367 0.438268028098574 0.996925743718911 -0.836321422695165 O95049 TJP3 O95049.3.S610.p_TJP3 O95049-3_S610s _1_1_610_610 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8127.8127.2 11.46 11.46 6.449 3 1 1 0 614.2901 1147.6066 S610s Hydrogen 610 (R) sREDLSALTR (Q) S(0.99)REDLS(0.0)ALT(0.0)R s:Phosphorylated S TJP3 103593.6 4 14 125.1 544.41 HUMAN 1 4.4217 -3.5826 AKLFRFASENDLPEW-p P43487;S60-p AKLFRFASENDLPEW 0.738473983077012 0.761518874965024 -0.0706666666666667 -0.052 2.49812347823622 1.63536949316807 -0.0706666666666667 -0.052 0.562584357001757 0.686219493096578 -0.616492677970711 -0.426400887664177 P43487 RANBP1 P43487.S60.p_RANBP1 P43487_S60s _1_1_60_60 P43487 F6WQW2|P43487|P43487-2 Ran-specific GTPase-activating protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24172.24172.2 14.84 14.84 99 1 1 1 0 937.4602 1793.9474 S60s TMT10 58 (R) FAsENDLPEWK (E) FAS(1.0)ENDLPEWK K:TMT10,s:Phosphorylated S RANBP1 23480.9 5 2 2775.1 71.11 HUMAN 1 -2.4981 -1.6354 AKLHKTMSQGEITKL-p B2RTY4-5;S1497-p AKLHKTMSQGEITKL 0.167043422870752 0.0645324017613754 0.240333333333333 0.241333333333333 15.5445158924963 15.8454446300765 0.240333333333333 0.241333333333333 0.0278964160000171 0.0260288833439282 2.9812131326858 3.03645005362897 B2RTY4 MYO9A B2RTY4.5.S1497.p_MYO9A B2RTY4-5_S1497s _1_1_1497_1497 B2RTY4-5 B2RTY4-4|B2RTY4-2|H3BRD5|B2RTY4-5 Isoform 5 of Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11946.11946.2 13.64 13.64 2.903 3 1 1 0 766.8932 1452.8132 S1497s TMT10 1495 (K) TMsQGEITK (L) T(0.0)MS(0.99)QGEIT(0.0)K K:TMT10,s:Phosphorylated S MYO9A 267577.4 8 14 457.1 306.95 HUMAN 1 15.5445 15.8454 AKLKLQGSPVPSLRQ-p Q9P2J2;S809-p AKLKLQGSPVPSLRQ 0.864901984525087 0.176626997718927 0.026 -0.176 1.22553886563884 9.90257825364597 0.026 -0.176 0.754129818821907 0.102268567949704 0.329533389395304 -1.96400431427664 Q9P2J2 IGSF9 Q9P2J2.S809.p_IGSF9 Q9P2J2_S809s _1_1_809_809 Q9P2J2 Q9P2J2|Q9P2J2-2 Protein turtle homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15734.15734.2 13.48 10.3 3.042 2 1 1 0 681.8709 1282.7681 S809s TMT10 806 (K) LQGsPVPSLR (Q) LQGS(0.99)PVPS(0.0)LR s:Phosphorylated S IGSF9 127719.1 4 3 2693.1 73.81 HUMAN 1 1.2255 -9.9026 AKLQDFKSFLLKDSE-p P34897;S470-p AKLQDFKSFLLKDSE 0.125743941781331 0.026369271971688 0.332666666666667 0.366333333333333 18.7169253462832 21.4386063757961 0.332666666666667 0.366333333333333 0.013437159285634 0.00718024663992486 3.6088385523352 4.1904337862052 P34897 SHMT2 P34897.S470.p_SHMT2 P34897_S470s _1_1_470_470 P34897 P34897|P34897-2|P34897-3 Serine hydroxymethyltransferase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31681.31681.3 12.7 12.7 99 1 1 1 0 669.3942 1926.2031 S470s TMT10 465 (K) LQDFKsFLLK (D) LQDFKS(1.0)FLLK K:TMT10,s:Phosphorylated S SHMT2 56448.4 1 6 2337.1 87.31 HUMAN 1 18.7169 21.4386 AKLQSIMSFLDEMEK-p Q9UPN4-2;S531-p AKLQSIMSFLDEMEK 0.93931869762336 0.00274191631715344 0.0123333333333333 -0.817333333333333 0.531245691576587 38.8245012292992 0.0123333333333333 -0.817333333333333 0.884861767566366 0.000131084057877837 0.151776163593568 -9.61500545908392 Q9UPN4 CEP131 Q9UPN4.2.S531.p_CEP131 Q9UPN4-2_S531s _1_1_531_531 Q9UPN4-2 Q9UPN4|Q9UPN4-2|I3L2J8|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.37630.37630.3 17.59 17.59 4.794 2 1 1 0 703.6857 2029.075 S531s TMT10 526 (K) LQSIMsFLDEMEK (S) LQS(0.0)IMS(0.99)FLDEMEK K:TMT10,s:Phosphorylated S CEP131 122301.7 3 19 359.1 345.98 HUMAN 1 0.5312 -38.8245 AKLSRGDSLKEPTSI-p Q9C0B5;S380-p AKLSRGDSLKEPTSI 0.684799668184202 0.846621797862426 0.0973333333333333 0.0326666666666667 3.08462451902049 1.01617163561939 0.0973333333333333 0.0326666666666667 0.491515873689635 0.791375929160096 0.737548698872398 0.277902575079488 Q9C0B5 ZDHHC5 Q9C0B5.S380.p_ZDHHC5 Q9C0B5_S380s _1_1_380_380 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12042.12042.4 14.2 14.2 1.978 6 1 1 0 618.5793 2391.3244 S380s TMT10 375 (K) LSRGDsLKEPTSIAESSR (H) LS(0.0)RGDS(0.99)LKEPT(0.0)S(0.0)IAES(0.0)S(0.0)R K:TMT10,s:Phosphorylated S ZDHHC5 78285 7 6 134.1 530.74 HUMAN 1 3.0846 1.0162 AKLTVENSPKQEAGI-p O43583;S73-p AKLTVENSPKQEAGI 0.839286384548877 0.731678935675793 -0.0326666666666667 0.035 1.47249570136261 1.86976584338188 -0.0326666666666667 0.035 0.71244350219695 0.650164744040515 -0.388532021655691 0.479709222844347 O43583 DENR O43583.S73.p_DENR O43583_S73s _1_1_73_73 O43583 O43583|F8VVL1 Density-regulated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13972.13972.5 23.49 20.68 2.211 4 1 1 0 769.2036 3762.0215 S73s TMT10 68 (K) LTVENsPKQEAGISEGQGTAGEEEEKK (K) LT(0.0)VENS(0.99)PKQEAGIS(0.0)EGQGT(0.0)AGEEEEKK K:TMT10,s:Phosphorylated S DENR 22491 9 3 1681.1 121.37 HUMAN 1 -1.4725 1.8698 AKLVPVLSAKAAQAS-p P37837;S275-p AKLVPVLSAKAAQAS 0.58759804069163 0.231252579697408 0.091 -0.131666666666667 4.25177011738428 8.37643403717204 0.091 -0.131666666666667 0.37568424996783 0.145330442632259 0.964960029920961 -1.69984147336656 P37837 TALDO1 P37837.S275.p_TALDO1 P37837_S275s _1_1_275_275 P37837 P37837|F2Z393 Transaldolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24604.24604.2 11.8 3.36 99 1 1 1 0 682.92 1284.8655 S275s TMT10 270 (K) LVPVLsAK (A) LVPVLS(1.0)AK K:TMT10,s:Phosphorylated S TALDO1 37710.6 1 5 2744.1 72.02 HUMAN 1 4.2518 -8.3764 AKLYINHTPPPLSKS-p Q8NI27;T1443-p AKLYINHTPPPLSKS 0.516508740561619 0.0975850965334309 0.0873333333333333 -0.213 5.29757116573904 13.3627981889298 0.0873333333333333 -0.213 0.295286018083226 0.0461020440237841 1.15832072024348 -2.57519105346635 Q8NI27 THOC2 Q8NI27.T1443.p_THOC2 Q8NI27_T1443t _1_1_1443_1443 Q8NI27 Q8NI27|A0A0C4DG98|Q8NI27-2 THO complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18255.18467.3 17.99 17.99 8.442 3 1 1 0 640.0252 1838.094 T1443t TMT10 1438 (K) LYINHtPPPLSK (S) LY(0.0)INHT(0.99)PPPLS(0.0)K K:TMT10,t:Phosphorylated T THOC2 184654.1 9 12 512.1 287.1 HUMAN 1 5.2976 -13.3628 AKMPARASPPHSKAA-p Q9HCM7;S844-p AKMPARASPPHSKAA 0.281637964370874 0.408485608596351 -0.233333333333333 -0.0793333333333333 10.4051005096432 5.17507299550262 -0.233333333333333 -0.0793333333333333 0.091094036994624 0.3037335040489 -2.05218662827868 -1.13581005316147 Q9HCM7 FBRSL1 Q9HCM7.S844.p_FBRSL1 Q9HCM7_S844s _1_1_844_844 Q9HCM7 Q9HCM7 Fibrosin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6719.6923.4 12.96 12.96 5 2 1 1 0 429.9814 1636.9358 S844s TMT10 839 (K) MPARAsPPHSK (A) MPARAS(0.99)PPHS(0.0)K K:TMT10,s:Phosphorylated S FBRSL1 111247 5 8 716.1 237.81 HUMAN 1 -10.4051 -5.1751 AKMSRKLSLPTDLKP-p Q5T5C0;S759-p AKMSRKLSLPTDLKP 0.232587423363545 0.0821245204298856 -0.185333333333333 0.324333333333333 12.1752920557661 14.3866863909788 -0.185333333333333 0.324333333333333 0.0605997446843322 0.0364192804403372 -2.36346561688074 2.76248252109526 Q5T5C0 STXBP5 Q5T5C0.S759.p_STXBP5 Q5T5C0_S759s _1_1_759_759 Q5T5C0 Q5T5C0|Q5T5C0-2 Syntaxin-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25204.25204.3 13.95 13.95 2.276 2 1 1 0 893.5317 2598.6252 S759s TMT10 757 (R) KLsLPTDLKPDLDVK (D) KLS(0.99)LPT(0.0)DLKPDLDVK K:TMT10,s:Phosphorylated S STXBP5 129167.7 5 6 3284.1 55.02 HUMAN 1 -12.1753 14.3867 AKNKLVGTPNPSTPL-p B4E3T4;T113-p AKNKLVGTPNPSTPL 0.977147434749144 0.0442735058048337 0.00600000000000001 0.255333333333333 0.19651087273937 18.1274282566111 0.00600000000000001 0.255333333333333 0.955760136535178 0.015390657526128 0.058092173596313 3.48522158711668 B4E3T4 RBPMS B4E3T4.T113.p_RBPMS B4E3T4_T113t _1_1_113_113 B4E3T4 B4E3T4|Q93062-3|Q93062-2|Q93062-5|Q93062-4|E5RJ31|E5RFP4 HCG2043421, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29311.29311.3 15.15 15.15 1.535 4 1 1 0 843.456 2448.3812 T113t TMT10 110 (K) LVGtPNPSTPLPNTVPQFIAR (E) LVGT(0.99)PNPS(0.0)T(0.0)PLPNT(0.0)VPQFIAR t:Phosphorylated T RBPMS 24997 1 2 4299.1 34.03 HUMAN 1 0.1965 18.1274 AKNLYIISVKGIKGR-p P62829;S41-p AKNLYIISVKGIKGR 0.626039464597712 0.70058514049814 0.0753333333333333 0.0376666666666667 3.77767138733821 2.12517388572252 0.0753333333333333 0.0376666666666667 0.419018175268566 0.613031246704336 0.874385363476091 0.536283925025011 P62829 RPL23 P62829.S41.p_RPL23 P62829_S41s _1_1_41_41 P62829 P62829|J3KT29|B9ZVP7 60S ribosomal protein L23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24795.24795.2 10.07 6.35 7.473 2 1 1 0 744.437 1407.8976 S41s TMT10 36 (K) NLYIIsVK (G) NLY(0.0)IIS(0.99)VK K:TMT10,s:Phosphorylated S RPL23 14979.3 1 2 3704.1 44.92 HUMAN 1 3.7777 2.1252 AKNSITDSQMDDVEV-p Q6UWZ7;S48-p AKNSITDSQMDDVEV 0.304557287260952 0.0181931822774972 0.153 0.377666666666667 9.67491145842452 23.9536944447768 0.153 0.377666666666667 0.107772722558154 0.00402374597739285 1.92528262539232 4.77792724743349 Q6UWZ7 FAM175A Q6UWZ7.S48.p_FAM175A Q6UWZ7_S48s _1_1_48_48 Q6UWZ7 Q6UWZ7|D6RHI5 BRCA1-A complex subunit Abraxas 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30208.30613.3 21.2 22.48 1.778 5 1 1 0 984.4835 2871.4698 S48s TMT10 43 (K) NSITDsQMDDVEVVYTIDIQK (Y) NS(0.0)IT(0.0)DS(0.99)QMDDVEVVY(0.0)T(0.0)IDIQK K:TMT10,s:Phosphorylated S ABRAXAS1 47061.3 6 1 2650.1 75.21 HUMAN 1 9.6749 23.9537 AKPAPSVSPGPWKPI-p Q96JM3;S344-p AKPAPSVSPGPWKPI 0.148303739525478 0.91520503990959 -0.665 -0.0136666666666667 16.7332349180938 0.54103862731978 -0.665 -0.0136666666666666 0.0212166351525103 0.8828687346583 -3.21027618566922 -0.154413559168289 Q96JM3 CHAMP1 Q96JM3.S344.p_CHAMP1 Q96JM3_S344s _1_1_344_344 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18896.18896.4 15.65 15.65 3.198 6 1 1 0 879.2286 3433.9402 S344s TMT10 325 (K) SNPSASSGPWKPAKPAPSVsPGPWK (P) S(0.0)NPS(0.0)AS(0.0)S(0.0)GPWKPAKPAPS(0.0)VS(0.99)PGPWK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 1 15 25.1 950.05 HUMAN 1 -16.7332 -0.541 AKPDAEDSDGSIASW-p Q6STE5;S175-p AKPDAEDSDGSIASW 0.717442807672643 0.16517983996024 0.0613333333333333 -0.153666666666667 2.72076817488717 10.284421454699 0.0613333333333333 -0.153666666666667 0.534469814653934 0.0936607981796276 0.663103198446604 -2.03032290135908 Q6STE5 SMARCD3 Q6STE5.S175.p_SMARCD3 Q6STE5_S175s _1_1_175_175 Q6STE5 Q6STE5|Q6STE5-2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28904.28904.3 14.4 14.4 1.479 6 1 1 0 1178.9059 3454.7531 S175s TMT10 159 (R) LYISNTFNPAKPDAEDsDGSIASWELR (V) LY(0.0)IS(0.0)NT(0.0)FNPAKPDAEDS(0.99)DGS(0.0)IAS(0.0)WELR K:TMT10,s:Phosphorylated S SMARCD3 55243.2 3 1 5107.1 22.9 HUMAN 1 2.7208 -10.2844 AKPEPSPSPRITRKS-p P26358;S154-p AKPEPSPSPRITRKS 0.919943013973899 0.000952253650599092 0.0213333333333333 -1.66566666666667 0.707934078916525 55.9232620533438 0.0213333333333333 -1.66566666666667 0.849584522808618 2.55666481484893e-06 0.198921910283302 -20.2560010068943 P26358 DNMT1 P26358.S154.p_DNMT1 P26358_S154s _1_1_154_154 P26358 P26358 DNA (cytosine-5)-methyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5603.5603.4 13.52 13.52 1.754 4 1 1 0 609.8243 2356.3076 S154s TMT10 141 (R) SKSDGEAKPEPSPsPR (I) S(0.0)KS(0.0)DGEAKPEPS(0.0)PS(0.99)PR K:TMT10,s:Phosphorylated S DNMT1 185501.2 3 5 431.1 316.29 HUMAN 1 0.7079 -55.9233 AKPERRPSLPPSKQA-p Q6PJT7;S343-p AKPERRPSLPPSKQA 0.734113593546408 0.0417675842092363 -0.0576666666666667 0.265 2.54120881718154 18.4832480943831 -0.0576666666666667 0.265 0.5570306831857 0.0141799660340408 -0.625580230014018 3.55772253392305 Q6PJT7 ZC3H14 Q6PJT7.S343.p_ZC3H14 Q6PJT7_S343s _1_1_343_343 Q6PJT7 Q6PJT7|Q6PJT7-2|Q6PJT7-9|Q6PJT7-5|G3V256|Q6PJT7-11|Q6PJT7-3|Q6PJT7-4|Q6PJT7-10|G3V5I6 Zinc finger CCCH domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13313.13524.5 16.18 16.18 1.515 8 1 1 0 647.1693 3151.8406 S343s TMT10 325 (R) TGSISSSVSVPAKPERRPsLPPSK (Q) T(0.0)GS(0.0)IS(0.0)S(0.0)S(0.0)VS(0.0)VPAKPERRPS(0.99)LPPS(0.0)K K:TMT10,s:Phosphorylated S ZC3H14 83844.1 11 8 420.1 320.31 HUMAN 1 -2.5412 18.4832 AKPHKEGTGQQERES-p Q6PKG0;T68-p AKPHKEGTGQQERES 0.544476841902382 0.027590049228953 0.104333333333333 0.294666666666667 4.87504872250299 21.1418870122808 0.104333333333333 0.294666666666667 0.325458132237339 0.00768796325213922 1.08110960480498 4.12426705338284 Q6PKG0 LARP1 Q6PKG0.T68.p_LARP1 Q6PKG0_T68tS90s_2_2_68_90 Q6PKG0 Q6PKG0 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16929.16929.5 12.91 12.91 1.927 3 2 2 0 961.2383 4642.2315 T68t S90s TMT10 66 (K) EGtGQQERESPRPLQLPGAEGPAIsDGEEGGGEPGAGGGAAGAAGAGR (R) EGT(0.99)GQQERES(0.0)PRPLQLPGAEGPAIS(0.99)DGEEGGGEPGAGGGAAGAAGAGR t:Phosphorylated T,s:Phosphorylated S LARP1 123907.4 2 65 28.1 931.95 HUMAN 1 4.875 21.1419 AKPPRHLTPEPDIVA-p Q5JSH3;T219-p AKPPRHLTPEPDIVA 0.425300115620663 0.605272755117461 -0.192 0.0986666666666667 6.83982797516891 2.95897873699907 -0.192 0.0986666666666667 0.207022334908893 0.505943622933222 -1.43294578103565 0.711968886190685 Q5JSH3 WDR44 Q5JSH3.T219.p_WDR44 Q5JSH3_T219t _1_1_219_219 Q5JSH3 Q5JSH3|Q5JSH3-2|Q5JSH3-4 WD repeat-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15921.15921.3 16.63 16.63 6.969 3 1 1 0 649.3515 1866.0737 T219t TMT10 217 (R) HLtPEPDIVASTK (K) HLT(0.99)PEPDIVAS(0.0)T(0.0)K K:TMT10,t:Phosphorylated T WDR44 101935 3 8 95.1 607.92 HUMAN 1 -6.8398 2.959 AKPPTGPSPATPARR-p P41231;S327-p AKPPTGPSPATPARR 0.734111141913226 0.0148077240954323 -0.059 -0.486333333333333 2.54146149269201 25.3342674796172 -0.059 -0.486333333333333 0.556998275700972 0.00292801469518295 -0.625633425992711 -5.1224325390418 P41231 P2RY2 P41231.S327.p_P2RY2 P41231_S327s _1_1_327_327 P41231 P41231 P2Y purinoceptor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7452.7452.3 15.35 15.35 2.769 3 1 1 0 667.6892 1921.0907 S327s TMT10 319 (R) DAKPPTGPsPATPAR (R) DAKPPT(0.0)GPS(0.99)PAT(0.0)PAR K:TMT10,s:Phosphorylated S P2RY2 43071.5 1 1 5920.1 15.35 HUMAN 1 -2.5415 -25.3343 AKPQLDLSIDSLDLS-p Q14980;S1721-p AKPQLDLSIDSLDLS 0.732306551743324 0.00493055216620731 0.0506666666666667 -0.693333333333333 2.56541141403217 33.6562084459951 0.0506666666666667 -0.693333333333333 0.55393506630797 0.000430902640519179 0.630670470135353 -7.6123750845098 Q14980 NUMA1 Q14980.S1721.p_NUMA1 Q14980_S1721s _1_1_1721_1721 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28193.28193.4 9.16 9.16 1.646 8 1 1 0 1162.8618 4568.4849 S1721s TMT10 1709 (K) SREPQAKPQLDLsIDSLDLSCEEGTPLSITSKLPR (T) S(0.0)REPQAKPQLDLS(0.99)IDS(0.0)LDLS(0.0)CEEGT(0.0)PLS(0.0)IT(0.0)S(0.0)KLPR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NUMA1 239339.3 8 15 31.1 900.97 HUMAN 1 2.5654 -33.6562 AKQNHDLTHRKSPSG-p Q9BVC5;T178-p AKQNHDLTHRKSPSG 0.24849594468616 0.0506845325810841 0.17 0.307333333333333 11.5488194095306 17.3017199766659 0.17 0.307333333333333 0.070003226761206 0.0186134982305758 2.25255370058445 3.31971349170395 Q9BVC5 C2orf49 Q9BVC5.T178.p_C2orf49 Q9BVC5_T178t_1_1_178_178 Q9BVC5 Q9BVC5 Ashwin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.4966.4966.4 10.31 10.31 10.305 3 1 1 0 581.3087 2259.2722 Q173q T178t Hydrogen 173 (K) qNHDLtHRKSPSGPVK (S) Q(1.0)NHDLT(0.99)HRKS(0.0)PS(0.0)GPVK K:TMT10-Lys-Only,q:Pyroglutamic acid,t:Phosphorylated T C2orf49 25915 6 2 1142.1 173.17 HUMAN 1 11.5488 17.3017 AKQTGIETPNKSGKT-p P49790-3;T730-p AKQTGIETPNKSGKT 0.295619650034717 0.00101523888709478 0.489 -1.444 9.96613661939409 52.1401584290582 0.489 -1.444 0.100782780989283 6.10919738367694e-06 1.97582781478905 -17.2123545059106 P49790 NUP153 P49790.3.T730.p_NUP153 P49790-3_T730t_1_1_730_730 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9136.9136.3 14.64 14.64 3.719 3 1 1 0 676.7045 1947.1478 T730t N732n TMT10 725 (K) QTGIEtPnKSGK (T) QT(0.0)GIET(0.99)PN(1.0)KS(0.0)GK K:TMT10,t:Phosphorylated T,n:Deamidated NUP153 158989.2 11 31 64.1 696.53 HUMAN 1 9.9661 -52.1402 AKRKKLISPESTVML-p P15924;S2041-p AKRKKLISPESTVML 0.704636067514992 0.0260732077298229 0.0536666666666667 0.423333333333333 2.85781875877219 21.5370408151796 0.0536666666666667 0.423333333333333 0.517866864942537 0.00701933417138559 0.691382710874641 4.21252342026252 P15924 DSP P15924.S2041.p_DSP P15924_S2041s _1_1_2041_2041 P15924 P15924|P15924-3 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.35047.35047.4 20.7 12.69 2.229 4 1 1 0 882.9642 3448.8874 S2041s TMT10 2039 (K) LIsPESTVMLLEAQAATGGIIDPHRNEK (L) LIS(0.99)PES(0.0)T(0.0)VMLLEAQAAT(0.0)GGIIDPHRNEK K:TMT10,s:Phosphorylated S DSP 334221.3 1 12 104.1 590.4 HUMAN 1 2.8578 21.537 AKRLLGDSDSEEEQK-p Q9BW71;S289-p AKRLLGDSDSEEEQK 0.162745792256947 0.0197732188612976 -0.442333333333333 0.74 15.7906291538262 23.3810196259912 -0.442333333333333 0.74 0.026359494933745 0.00459090216102123 -3.02809131900726 4.63977402271683 Q9BW71 HIRIP3 Q9BW71.S289.p_HIRIP3 Q9BW71_S289sS291s_2_2_289_291 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13884.13884.3 9.49 9.49 99 2 2 2 0 708.6615 1964.0337 S289s S291s TMT10 284 (K) RLLGDsDsEEEQK (E) RLLGDS(1.0)DS(1.0)EEEQK K:TMT10,s:Phosphorylated S HIRIP3 62298.3 3 24 178.1 481.23 HUMAN 1 -15.7906 23.381 AKRPRVTSGGVSESP-p E7EPP6;S296-p AKRPRVTSGGVSESP 0.037721822717877 0.00103022766715395 -0.579333333333333 -1.17033333333333 32.4429062061316 51.4249320684596 -0.579333333333333 -1.17033333333333 0.000569782858130383 7.20289017777948e-06 -7.21121892825819 -16.6891517912794 E7EPP6 CHEK1 E7EPP6.S296.p_CHEK1 E7EPP6_S296s _1_1_296_296 E7EPP6 E7EPP6|O14757|O14757-3|J3KN87|O14757-2 Serine/threonine-protein kinase Chk1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15398.15398.2 9.34 9.34 1.107 6 1 1 0 982.4946 1884.0115 S296s TMT10 294 (R) VTsGGVSESPSGFSK (H) VT(0.0)S(0.99)GGVS(0.0)ES(0.0)PS(0.0)GFS(0.0)K K:TMT10,s:Phosphorylated S CHEK1 56201.4 2 1 3241.1 56.14 HUMAN 1 -32.4429 -51.4249 AKRRKLNSGGGLSEE-p A2ABF9;S289-p AKRRKLNSGGGLSEE 0.131225506248289 0.00172752646433129 -0.373666666666667 -0.989333333333333 18.2296544704447 43.7371921756006 -0.373666666666667 -0.989333333333333 0.015032615625064 4.22941968641871e-05 -3.50889289954809 -11.9471184433329 A2ABF9 EHMT2 A2ABF9.S289.p_EHMT2 A2ABF9_S289s _1_1_289_289 A2ABF9 A2ABF9|A0A0G2JK64|A2ABF8|A0A0G2JIR1|Q96KQ7|Q96KQ7-2|A0A0G2JIS2 Histone-lysine N-methyltransferase EHMT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17546.17546.3 15.74 15.74 4.668 3 1 1 0 585.9548 1675.8812 S289s TMT10 287 (K) LNsGGGLSEELGSAR (R) LNS(0.99)GGGLS(0.0)EELGS(0.0)AR s:Phosphorylated S EHMT2 141220.9 3 8 719.1 237.26 HUMAN 1 -18.2297 -43.7372 AKRRRVNSNGKESPG-p Q8N108-12;S536-p AKRRRVNSNGKESPG 0.0520154613962689 0.283072267160163 -0.504 0.130666666666667 27.9272828446142 7.22660376660159 -0.504 0.130666666666667 0.00161165364793586 0.189382403215564 -5.82545728707779 1.50019560268899 Q8N108 MIER1 Q8N108.12.S536.p_MIER1 Q8N108-12_S536sS541s_2_2_536_541 Q8N108-12 Q8N108-12|Q8N108-13|Q8N108-17 Isoform 2 of Mesoderm induction early response protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26150.26150.4 9.18 9.18 1.266 6 2 2 0 1091.2516 4202.0405 S536s S541s TMT10 534 (R) VNsNGKEsPGSSEFFQEAVSHGKFEELENTDD (-) VNS(0.99)NGKES(0.99)PGS(0.0)S(0.0)EFFQEAVS(0.0)HGKFEELENT(0.0)DD K:TMT10,s:Phosphorylated S MIER1 63824.4 5 8 1736.1 118.57 HUMAN 1 -27.9273 7.2266 AKRRVPATPRLPARL-p Q15035;T334-p AKRRVPATPRLPARL 0.270596035797395 0.00119261798920071 0.171 -1.03866666666667 10.7578787823104 48.2365041353235 0.171 -1.03866666666667 0.0839870102784941 1.50089249668336e-05 2.11374374691587 -14.5375748171277 Q15035 TRAM2 Q15035.T334.p_TRAM2 Q15035_T334t _1_1_334_334 Q15035 Q15035 Translocating chain-associated membrane protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11427.11427.3 11.01 7.67 99 1 1 1 0 462.932 1306.8157 T334t TMT10 331 (R) VPAtPRLPAR (L) VPAT(1.0)PRLPAR t:Phosphorylated T TRAM2 43783.4 2 1 4369.1 32.65 HUMAN 1 10.7579 -48.2365 AKRSLTESLESILSR-p Q86TI0-2;S507-p AKRSLTESLESILSR 0.854367253530018 0.601385534608695 -0.051 -0.108 1.32629827284356 2.99446682813416 -0.051 -0.108 0.736834874195371 0.50182618313034 -0.353836460311998 -0.719187391392626 Q86TI0 TBC1D1 Q86TI0.2.S507.p_TBC1D1 Q86TI0-2_S507s _1_1_507_507 Q86TI0-2 Q86TI0|Q86TI0-2 Isoform 2 of TBC1 domain family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27412.27412.3 11.85 11.85 2.853 5 1 1 0 548.6187 1563.8791 S507s TMT10 503 (R) SLTEsLESILSR (G) S(0.0)LT(0.0)ES(0.99)LES(0.0)ILS(0.0)R s:Phosphorylated S TBC1D1 132688.3 3 5 587.1 264.9 HUMAN 1 -1.3263 -2.9945 AKRVCTISPAPRHSP-p O43439-4;S274-p AKRVCTISPAPRHSP 0.716292953587446 0.158700051229631 -0.0936666666666667 -0.211 2.73290488461466 10.5166243183442 -0.0936666666666667 -0.211 0.532978280707382 0.0887845848216708 -0.665619771820512 -2.07073977435286 O43439 CBFA2T2 O43439.4.S274.p_CBFA2T2 O43439-4_S274s _1_1_274_274 O43439-4 O43439-4|O43439-5|O43439-2 Isoform 4 of Protein CBFA2T2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6484.6484.3 12.05 12.05 2.448 2 1 1 0 489.256 1385.7885 S274s TMT10 269 (K) RVCTIsPAPR (H) RVCT(0.0)IS(0.99)PAPR C:Carbamidomethylation,s:Phosphorylated S CBFA2T2 68762.1 3 3 2492.1 81.27 HUMAN 1 -2.7329 -10.5166 AKRVTFPSDEDIVSG-p O75864;S50-p AKRVTFPSDEDIVSG 0.363649608980053 0.0596322438800035 0.149333333333333 -0.247666666666667 8.15570472547003 16.3138809601809 0.149333333333333 -0.247666666666667 0.152907760433731 0.0233674813090063 1.66216091559067 -3.12643003424971 O75864 PPP1R37 O75864.S50.p_PPP1R37 O75864_S50s _1_1_50_50 O75864 O75864 Protein phosphatase 1 regulatory subunit 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22693.22693.4 19.05 17.15 2.864 3 1 1 0 760.3916 2958.5725 S50s TMT10 45 (K) RVTFPsDEDIVSGAVEPKDPWR (H) RVT(0.0)FPS(0.99)DEDIVS(0.0)GAVEPKDPWR K:TMT10,s:Phosphorylated S PPP1R37 75450.7 6 2 1340.1 151.86 HUMAN 1 8.1557 -16.3139 AKSELTLTPDPAPPM-p Q9NRA0-5;T466-p AKSELTLTPDPAPPM 0.106808849359268 0.0317805608871883 -0.811666666666667 -0.28 20.455432378181 20.2278714462539 -0.811666666666667 -0.28 0.009004441111929 0.00948883413824734 -3.97737996443756 -3.92429993528437 Q9NRA0 SPHK2 Q9NRA0.5.T466.p_SPHK2 Q9NRA0-5_T466t _1_1_466_466 Q9NRA0-5 Q9NRA0-5|M0R344|Q9NRA0-2|Q9NRA0-3|Q9NRA0-4 Isoform 5 of Sphingosine kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16900.16900.4 13.69 13.69 1.357 4 1 1 0 619.8099 2396.2594 T466t TMT10 461 (K) SELTLtPDPAPPMAHSPLHR (S) S(0.0)ELT(0.0)LT(0.99)PDPAPPMAHS(0.0)PLHR t:Phosphorylated T SPHK2 81287.6 1 3 3042.1 62.32 HUMAN 1 -20.4554 -20.2279 AKSGPLISDAELDAF-p Q7Z3T8;S529-p AKSGPLISDAELDAF 0.582975772166803 0.0465549049962377 -0.0723333333333333 -0.27 4.31101330365109 17.8205039659158 -0.0723333333333333 -0.27 0.3705942439827 0.0165177011167242 -0.976132531930657 -3.42326208593931 Q7Z3T8 ZFYVE16 Q7Z3T8.S529.p_ZFYVE16 Q7Z3T8_S529s _1_1_529_529 Q7Z3T8 Q7Z3T8|Q7Z3T8-3 Zinc finger FYVE domain-containing protein 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36800.36800.4 17.57 17.88 1.857 6 1 1 0 827.1804 3225.7295 S529s TMT10 524 (K) SGPLIsDAELDAFLTEQYLQTTNIK (S) S(0.0)GPLIS(0.99)DAELDAFLT(0.0)EQY(0.0)LQT(0.0)T(0.0)NIK K:TMT10,s:Phosphorylated S ZFYVE16 171296.7 1 7 872.1 209.65 HUMAN 1 -4.311 -17.8205 AKSITNGSDDGAQPS-p Q9UBT2;S570-p AKSITNGSDDGAQPS 0.500830276223728 0.0346955935259337 0.119666666666667 0.401333333333333 5.5367056247886 19.6596953075319 0.119666666666667 0.401333333333333 0.27946629511319 0.0108150982523888 1.20156659587859 3.80281353377248 Q9UBT2 UBA2 Q9UBT2.S570.p_UBA2 Q9UBT2_S570sS592s_2_2_570_592 Q9UBT2 Q9UBT2|Q9UBT2-2|U3KQ93 SUMO-activating enzyme subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20188.20188.4 22.29 22.29 1.209 11 2 2 0 1262.0198 4885.1212 S570s S592s TMT10 565 (K) SITNGsDDGAQPSTSTAQEQDDVLIVDsDEEDSSNNADVSEEER (S) S(0.0)IT(0.0)NGS(0.99)DDGAQPS(0.0)T(0.0)S(0.0)T(0.0)AQEQDDVLIVDS(0.99)DEEDS(0.0)S(0.0)NNADVS(0.0)EEER s:Phosphorylated S UBA2 71792.9 3 7 1633.1 125.05 HUMAN 1 5.5367 19.6597 AKSKSAESPSWTPAE-p Q13415;S199-p AKSKSAESPSWTPAE 0.182735755275441 0.00462368567480687 -0.212 -1.10433333333333 14.5095341111056 34.1842468079464 -0.212 -1.10433333333333 0.0354035318143498 0.000381570963966125 -2.7869599946061 -7.7986822218778 Q13415 ORC1 Q13415.S199.p_ORC1 Q13415_S199s _1_1_199_199 Q13415 Q13415 Origin recognition complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12266.12266.4 13.19 13.19 1.166 5 1 1 0 645.5921 2499.3811 S199s TMT10 194 (K) SKSAEsPSWTPAEHVAK (R) S(0.0)KS(0.0)AES(0.99)PS(0.0)WT(0.0)PAEHVAK K:TMT10,s:Phosphorylated S ORC1 98432 4 1 939.1 198.15 HUMAN 1 -14.5095 -34.1842 AKSLDRRSTEPSVTP-p Q6WCQ1-2;S377-p AKSLDRRSTEPSVTP 0.281098801169768 0.0645697468226713 -0.176333333333333 -0.666 10.4223713044771 15.8371107414643 -0.176333333333333 -0.666 0.0907324983635938 0.0260788793921522 -2.05519595312408 -3.03485852507387 Q6WCQ1 MPRIP Q6WCQ1.2.S377.p_MPRIP Q6WCQ1-2_S377s_1_1_377_377 Q6WCQ1-2 Q6WCQ1-2 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25198.25198.4 9.52 9.52 9.518 4 1 1 0 611.8442 2363.3789 S377s N388n TMT10 377 (R) sTEPSVTPDLLnFKK (G) S(0.99)T(0.0)EPS(0.0)VT(0.0)PDLLN(1.0)FKK K:TMT10,s:Phosphorylated S,n:Deamidated MPRIP 118899.7 1 9 204.1 449.03 HUMAN 1 -10.4224 -15.8371 AKSLGEKSPAASGAR-p O75683;S74-p AKSLGEKSPAASGAR 0.87775511826419 0.00221674111277029 -0.0253333333333333 -0.877 1.11388076434509 41.1852085025612 -0.0253333333333333 -0.877 0.773770064098987 7.6116559495729e-05 -0.3022052308452 -10.6775136357674 O75683 SURF6 O75683.S74.p_SURF6 O75683_S74s _1_1_74_74 O75683 O75683 Surfeit locus protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7631.7631.3 11.68 5.82 1.176 3 1 1 0 590.3168 1688.9696 S74s TMT10 69 (K) SLGEKsPAASGAR (R) S(0.0)LGEKS(0.99)PAAS(0.0)GAR K:TMT10,s:Phosphorylated S SURF6 41563.8 3 1 2253.1 91.2 HUMAN 1 -1.1139 -41.1852 AKSPEAKSPLQSQPH-p Q9UI08-2;S356-p AKSPEAKSPLQSQPH 0.202041682996529 0.00976667555275331 -0.218333333333333 -0.413666666666667 13.4880544454471 28.3000688105747 -0.218333333333333 -0.413666666666667 0.0447913915933969 0.00147908495303464 -2.59939488990971 -5.92243813434197 Q9UI08 EVL Q9UI08.2.S356.p_EVL Q9UI08-2_S356s _1_1_356_356 Q9UI08-2 Q9UI08-2|Q9UI08-3|Q9UI08-4 Isoform 1 of Ena/VASP-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5450.5450.3 11.78 7.33 1.83 4 1 1 0 729.7154 2107.166 S356s TMT10 351 (K) SPEAKsPLQSQPHSR (M) S(0.0)PEAKS(0.99)PLQS(0.0)QPHS(0.0)R K:TMT10,s:Phosphorylated S EVL 44905.3 1 7 2000.1 103.33 HUMAN 1 -13.4881 -28.3001 AKSRSPGSPVGEGTG-p P35611-3;S358-p AKSRSPGSPVGEGTG 0.253551933885431 0.902623843403388 0.322333333333333 -0.0173333333333333 11.3523837865135 0.619742749105403 0.322333333333333 -0.0173333333333333 0.07324224055562 0.867013231078846 2.21796314390502 -0.175555627574071 P35611 ADD1 P35611.3.S358.p_ADD1 P35611-3_S358s _1_1_358_358 P35611-3 P35611-3|E7ENY0|P35611-4|P35611-6|E7EV99 Isoform 3 of Alpha-adducin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30426.30426.4 23.64 22.02 1.172 4 1 1 0 878.1863 3429.7513 S358s TMT10 355 (R) SPGsPVGEGTGSPPKWQIGEQEFEALMR (M) S(0.0)PGS(0.99)PVGEGT(0.0)GS(0.0)PPKWQIGEQEFEALMR K:TMT10,s:Phosphorylated S ADD1 84872.1 4 4 264.1 396.09 HUMAN 1 11.3524 -0.6197 AKTAPPASPEARKRA-p Q96JM3;S542-p AKTAPPASPEARKRA 0.183896650188356 0.524712536761929 -0.359 -0.095 14.4590591104713 3.76377856900749 -0.359 -0.095 0.0358174026319655 0.420360735358262 -2.77759945957397 -0.871556168441802 Q96JM3 CHAMP1 Q96JM3.S542.p_CHAMP1 Q96JM3_S542s _1_1_542_542 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5304.5304.2 12.86 10.8 4.668 2 1 1 0 653.3243 1225.6738 S542s TMT10 537 (K) TAPPAsPEAR (K) T(0.0)APPAS(0.99)PEAR s:Phosphorylated S CHAMP1 90067.4 9 31 25.1 950.05 HUMAN 1 -14.4591 -3.7638 AKTGGTVSDQALLFG-p Q9GZR7-2;S271-p AKTGGTVSDQALLFG 0.222839538119785 0.0379973285043717 0.259 -0.255666666666667 12.5442932234341 19.0738730004728 0.259 -0.255666666666667 0.0556635214436197 0.0123769233094893 2.42926602582623 -3.6797104826022 Q9GZR7 DDX24 Q9GZR7.2.S271.p_DDX24 Q9GZR7-2_S271s _1_1_271_271 Q9GZR7-2 Q9GZR7|G3V529|Q9GZR7-2|F5GYL3|A0A1W2PRR2 Isoform 2 of ATP-dependent RNA helicase DDX24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28067.28067.3 16.88 13.9 2.21 5 1 1 0 963.1284 2807.3897 S271s TMT10 266 (K) TGGTVsDQALLFGDDDAGEGPSSLIR (E) T(0.0)GGT(0.0)VS(0.99)DQALLFGDDDAGEGPS(0.0)S(0.0)LIR s:Phosphorylated S DDX24 90923.6 1 7 432.1 315.56 HUMAN 1 12.5443 -19.0739 AKTGVTSTSDSEEEG-p O75475;T272-p AKTGVTSTSDSEEEG 0.174431385631127 0.0381649967020156 -0.364333333333333 0.288333333333333 15.1051020906097 19.0536417516242 -0.364333333333333 0.288333333333333 0.0308666708583297 0.0124347146855916 -2.89818650085665 3.67549716270197 O75475 PSIP1 O75475.T272.p_PSIP1 O75475_T272tS273sS275s_3_3_272_275 O75475 O75475|O75475-2|O75475-3 PC4 and SFRS1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11390.11390.4 13.35 13.35 1.131 6 3 3 0 789.5868 2915.4209 T272t S273s S275s TMT10 267 (K) TGVTStsDsEEEGDDQEGEKK (R) T(0.0)GVT(0.0)S(0.0)T(0.99)S(0.99)DS(0.99)EEEGDDQEGEKK K:TMT10,t:Phosphorylated T,s:Phosphorylated S PSIP1 60216.3 2 17 382.1 334.17 HUMAN 1 -15.1051 19.0536 AKTHTDSSEKELEPE-p Q9H3P7;S345-p AKTHTDSSEKELEPE 0.934954648593012 0.864835758469674 -0.0143333333333333 -0.028 0.574309838802508 0.889064545611783 -0.0143333333333333 -0.028 0.876130937346648 0.814879787236751 -0.163402625646211 -0.245791309762024 Q9H3P7 ACBD3 Q9H3P7.S345.p_ACBD3 Q9H3P7_S344sS345s_2_2_344_345 Q9H3P7 Q9H3P7 Golgi resident protein GCP60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20655.20655.4 13.95 13.95 1.169 4 2 2 0 865.4133 3298.6894 S344s S345s TMT10 340 (K) THTDssEKELEPEAAEEALENGPK (E) T(0.0)HT(0.0)DS(0.99)S(0.99)EKELEPEAAEEALENGPK K:TMT10,s:Phosphorylated S ACBD3 60877.6 1 5 2173.1 94.52 HUMAN 1 -0.5743 -0.8891 AKTKGLQSGVDIGVK-p B4DUT8;S159-p AKTKGLQSGVDIGVK 0.302699451769611 0.664780300015656 0.177666666666667 0.0843333333333333 9.72458880197173 2.42698863526567 0.177666666666667 0.0843333333333334 0.106546973953268 0.571875033002611 1.93389935088119 0.601339119551383 B4DUT8 CNN2 B4DUT8.S159.p_CNN2 B4DUT8_S159s _1_1_159_159 B4DUT8 B4DUT8 Calponin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19655.19655.3 9.79 9.79 99 1 1 1 0 537.6355 1530.9256 S159s TMT10 156 (K) GLQsGVDIGVK (Y) GLQS(1.0)GVDIGVK K:TMT10,s:Phosphorylated S CNN2 36399.5 1 4 1713.2 119.85 HUMAN 1 9.7246 2.427 AKVERPPSPFSMAPQ-p P22681;S483-p AKVERPPSPFSMAPQ 0.668622007017775 0.572907026226826 0.063 0.0553333333333334 3.26926638755258 3.26117982944846 0.063 0.0553333333333334 0.471056890846286 0.471934815312073 0.774592266534222 0.772865476503288 P22681 CBL P22681.S483.p_CBL P22681_S483s _1_1_483_483 P22681 P22681|A0A0U1RQX8 E3 ubiquitin-protein ligase CBL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27950.28156.5 24.56 18.27 1.746 3 1 1 0 860.8758 4220.3782 S483s TMT10 472 (K) ELAGAKVERPPsPFSMAPQASLPPVPPRLDLLPQR (V) ELAGAKVERPPS(0.99)PFS(0.0)MAPQAS(0.0)LPPVPPRLDLLPQR K:TMT10,s:Phosphorylated S CBL 100943.3 43 4 741.1 234.1 HUMAN 1 3.2693 3.2612 AKVLNKKTPESKPTI-p Q9Y3B9;T104-p AKVLNKKTPESKPTI 0.329938858763132 0.00148879259546502 -0.181 -1.04166666666667 9.00318760887064 45.6247922790942 -0.181 -1.04166666666667 0.125800173220979 2.73855061465537e-05 -1.80891465501417 -12.9755911245512 Q9Y3B9 RRP15 Q9Y3B9.T104.p_RRP15 Q9Y3B9_T104t _1_1_104_104 Q9Y3B9 Q9Y3B9 RRP15-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16943.16943.4 8.42 8.42 8.417 3 1 1 0 755.9781 2940.9198 T104t TMT10 99 (K) VLNKKtPESKPTILVK (N) VLNKKT(0.99)PES(0.0)KPT(0.0)ILVK K:TMT10,t:Phosphorylated T RRP15 31654.8 1 3 2423.1 84.16 HUMAN 1 -9.0032 -45.6248 AKVLRNESPPQVPVY-p Q9UKL3;S875-p AKVLRNESPPQVPVY 0.200797395490016 0.111211777557805 0.205 -0.178333333333333 13.5480551284599 12.590356837424 0.205 -0.178333333333333 0.0441768237137731 0.055076244123104 2.61030841049803 -2.43622014074746 Q9UKL3 CASP8AP2 Q9UKL3.S875.p_CASP8AP2 Q9UKL3_S875s _1_1_875_875 Q9UKL3 Q9UKL3|A0A087WTW5 CASP8-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10146.10146.3 16.5 16.5 16.5 3 1 1 0 673.6561 1938.9871 S875s Hydrogen 873 (R) NEsPPQVPVYNNSHK (D) NES(0.99)PPQVPVY(0.0)NNS(0.0)HK K:TMT10-Lys-Only,s:Phosphorylated S CASP8AP2 224993 3 4 740.1 234.21 HUMAN 1 13.5481 -12.5904 AKVSDGGSSSTDFKM-p Q7Z6Z7;S3564-p AKVSDGGSSSTDFKM 0.867635849079879 0.128254579495215 -0.024 0.167 1.20259855309681 11.7610037793611 -0.024 0.167 0.758123824271951 0.0666652668814865 -0.323953527095693 2.28889829185731 Q7Z6Z7 HUWE1 Q7Z6Z7.S3564.p_HUWE1 Q7Z6Z7_S3564s _1_1_3564_3564 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12315.12315.2 9.43 9.43 1.133 5 1 1 0 862.911 1644.8481 S3564s TMT10 3559 (K) VSDGGsSSTDFK (M) VS(0.0)DGGS(0.99)S(0.0)S(0.0)T(0.0)DFK K:TMT10,s:Phosphorylated S HUWE1 485818.9 2 57 11.1 1210.45 HUMAN 1 -1.2026 11.761 AKVSFTGSVPTGMKI-p P49189;S233-p AKVSFTGSVPTGMKI 0.876113044322928 0.256352355711578 -0.0233333333333333 -0.117333333333333 1.1265253685233 7.78606782157325 -0.0233333333333333 -0.117333333333333 0.77152048755851 0.166491941538761 -0.305321642733562 -1.59753362551147 P49189 ALDH9A1 P49189.S233.p_ALDH9A1 P49189_S233s _1_1_233_233 P49189 P49189|P49189-2 4-trimethylaminobutyraldehyde dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21262.21262.3 12.76 12.76 3.138 4 1 1 0 583.6396 1668.9395 S233s TMT10 228 (K) VSFTGsVPTGMK (I) VS(0.0)FT(0.0)GS(0.99)VPT(0.0)GMK K:TMT10,s:Phosphorylated S ALDH9A1 54713.8 1 1 5596.1 17.82 HUMAN 1 -1.1265 -7.7861 AKVSNSPSQAIEVVE-p Q96EY7-2;S216-p AKVSNSPSQAIEVVE 0.813477101642355 0.1346005633068 -0.0433333333333333 0.275333333333333 1.72246715612965 11.4795349725208 -0.0433333333333333 0.275333333333333 0.672594457791012 0.0711289672008717 -0.446423811593243 2.23928306470187 Q96EY7 PTCD3 Q96EY7.2.S216.p_PTCD3 Q96EY7-2_S216s _1_1_216_216 Q96EY7-2 Q96EY7-2 Isoform 2 of Pentatricopeptide repeat domain-containing protein 3, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.37588.37588.3 16.45 16.45 1.209 6 1 1 0 1137.9113 3331.7405 S216s TMT10 211 (K) VSNSPsQAIEVVELASAFSLPICEGLTQR (V) VS(0.0)NS(0.0)PS(0.99)QAIEVVELAS(0.0)AFS(0.0)LPICEGLT(0.0)QR C:Carbamidomethylation,s:Phosphorylated S PTCD3 32147.9 1 2 3635.1 46.48 HUMAN 1 -1.7225 11.4795 AKVWDAVSGDELMTL-p Q9Y3F4-2;S103-p AKVWDAVSGDELMTL 0.93742188717773 0.940502538404961 0.012 0.00866666666666669 0.545926814929382 0.379743116755405 0.012 0.0086666666666667 0.881875583609941 0.916274685757215 0.155749917849544 0.110120886923192 Q9Y3F4 STRAP Q9Y3F4.2.S103.p_STRAP Q9Y3F4-2_S103s _1_1_103_103 Q9Y3F4-2 Q9Y3F4-2 Isoform 2 of Serine-threonine kinase receptor-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28304.28309.3 19.54 19.04 6.788 2 1 1 0 770.7227 2230.1942 S103s TMT10 98 (K) VWDAVsGDELMTLAHK (H) VWDAVS(0.99)GDELMT(0.0)LAHK K:TMT10,s:Phosphorylated S STRAP 40119.4 1 1 2222.1 92.92 HUMAN 1 0.5459 0.3797 AKWKKQGYENLCCLR-p P41223-2;Y97-p AKWKKQGYENLCCLR 0.907788258321729 0.27612215831907 -0.0216666666666667 -0.147666666666667 0.825397532384368 7.3643823470382 -0.0216666666666667 -0.147666666666667 0.826913813370546 0.183468607734316 -0.229488939397042 -1.52421433371727 P41223 BUD31 P41223.2.Y97.p_BUD31 P41223-2_Y97y _1_1_97_97 P41223-2 P41223-2|C9JCD9 Isoform 2 of Protein BUD31 homolog GG20160819_MSz_CCLE_T4D7_pY_Injection_01.14568.14568.2 11.66 5.85 99 1 1 1 0 811.3579 1541.7402 Y97y TMT10 95 (K) QGyENLCCLR (C) QGY(1.0)ENLCCLR C:Carbamidomethylation,y:Phosphorylated Y BUD31 17787.3 2 1 306.1 11.66 HUMAN 1 -0.8254 -7.3644 AKYRRQVSEDPDIDS-p P29536;S12-p AKYRRQVSEDPDIDS 0.962760324423884 0.00258719205348416 -0.0103333333333333 0.850666666666667 0.319148027383442 39.504562992688 -0.0103333333333333 0.850666666666667 0.929148643656921 0.000112084020461817 -0.0931334583480979 9.91073553169791 P29536 LMOD1 P29536.S12.p_LMOD1 P29536_S12s_1_1_12_12 P29536 P29536 Leiomodin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.38107.38107.3 18.73 18.33 1.808 4 1 1 0 1056.4856 3104.4918 Q10q S12s Hydrogen 10 (R) qVsEDPDIDSLLETLSPEEMEELEK (E) Q(1.0)VS(0.99)EDPDIDS(0.0)LLET(0.0)LS(0.0)PEEMEELEK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S LMOD1 67200.1 3 1 2749.1 71.87 HUMAN 1 -0.3191 39.5046 ALAAGADSPKTEEAR-p Q4KMP7;S132-p ALAAGADSPKTEEAR 0.290216881946097 0.592539460658319 0.182 0.0563333333333334 10.1248191745341 3.07509890224853 0.182 0.0563333333333334 0.0971668407705847 0.492595125311522 2.00340440482105 0.735520161352116 Q4KMP7 TBC1D10B Q4KMP7.S132.p_TBC1D10B Q4KMP7_S132s _1_1_132_132 Q4KMP7 Q4KMP7 TBC1 domain family member 10B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11027.11027.5 19.91 19.91 1.967 7 1 1 0 700.1624 3416.8174 S132s TMT10 125 (R) ALAAGADsPKTEEARPSPAPGPGTPTGTPTR (T) ALAAGADS(0.99)PKT(0.0)EEARPS(0.0)PAPGPGT(0.0)PT(0.0)GT(0.0)PT(0.0)R K:TMT10,s:Phosphorylated S TBC1D10B 87710.7 10 2 462.1 304.34 HUMAN 1 10.1248 3.0751 ALAASSRSPLDSHGE-p Q96CN9;S416-p ALAASSRSPLDSHGE 0.778016797239451 0.671690481016717 0.0423333333333333 -0.0613333333333333 2.09450248849233 2.36318235310961 0.0423333333333333 -0.0613333333333333 0.617376012123682 0.580339010212163 0.529630052491487 -0.587736484068705 Q96CN9 GCC1 Q96CN9.S416.p_GCC1 Q96CN9_S416s _1_1_416_416 Q96CN9 Q96CN9 GRIP and coiled-coil domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22692.22692.4 17.05 14.45 1.123 7 1 1 0 834.4406 3254.7633 S416s TMT10 407 (K) TLALAASSRsPLDSHGEESSLDVNVLK (D) T(0.0)LALAAS(0.0)S(0.0)RS(0.99)PLDS(0.0)HGEES(0.0)S(0.0)LDVNVLK K:TMT10,s:Phosphorylated S GCC1 88037.3 2 1 3490.1 49.82 HUMAN 1 2.0945 -2.3632 ALAFAPFSPPKRLRL-p Q86Y97;S439-p ALAFAPFSPPKRLRL 0.850329083846723 0.424954079038645 -0.05 -0.0866666666666667 1.36261795105366 4.94657886678494 -0.05 -0.0866666666666667 0.730698481629439 0.320141601621447 -0.362517064039696 -1.09404011965669 Q86Y97 SUV420H2 Q86Y97.S439.p_SUV420H2 Q86Y97_S439s _1_1_439_439 Q86Y97 Q86Y97|A0A0D9SF94 Histone-lysine N-methyltransferase KMT5C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27112.27112.3 12.18 12.18 99 1 1 1 0 604.6674 1732.0198 S439s TMT10 431 (K) QALAFAPFsPPK (R) QALAFAPFS(1.0)PPK K:TMT10,s:Phosphorylated S KMT5C 53024.9 1 3 4390.1 32.15 HUMAN 1 -1.3626 -4.9466 ALAGRLRSFSMQDLR-p Q9H6H4;S150-p ALAGRLRSFSMQDLR 0.0584327871562607 0.00965613323391043 -0.731333333333333 -0.638333333333333 26.9448599605638 28.4014754760593 -0.731333333333333 -0.638333333333333 0.00202075659078729 0.0014449487791211 -5.55382189868538 -5.95135448194619 Q9H6H4 REEP4 Q9H6H4.S150.p_REEP4 Q9H6H4_S150s _1_1_150_150 Q9H6H4 Q9H6H4|E5RGS2 Receptor expression-enhancing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19467.19467.3 11.95 6.38 3.457 2 1 1 0 521.2643 1481.8096 S150s TMT10 148 (R) LRsFSMQDLR (S) LRS(0.99)FS(0.0)MQDLR s:Phosphorylated S REEP4 29565.8 2 1 1742.1 118.21 HUMAN 1 -26.9449 -28.4015 ALAGRSPSPASGRRG-p Q9UQ35;S297-p ALAGRSPSPASGRRG 0.0386603595331013 0.0211648545450746 0.717333333333333 0.980666666666667 32.1900101545155 22.9027205207979 0.717333333333333 0.980666666666667 0.000603947217247323 0.00512540216395977 7.12712020722959 4.52642636764609 Q9UQ35 SRRM2 Q9UQ35.S297.p_SRRM2 Q9UQ35_S297s _1_1_297_297 Q9UQ35 Q9UQ35|Q9UQ35-2|Q9UQ35-3|A0A087X1W1 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3349.3349.3 7.78 7.78 1.548 3 1 1 0 408.5415 1143.6432 S297s TMT10 295 (R) SPsPASGRR (G) S(0.0)PS(0.99)PAS(0.0)GRR s:Phosphorylated S SRRM2 300351.7 2 7 2.1 3310.34 HUMAN 1 32.19 22.9027 ALAKDMESPTKLDVT-p E7EVA0;S297-p ALAKDMESPTKLDVT 0.578243971826855 0.209322416798706 -0.0873333333333333 -0.198 4.37485143423089 8.93489843190416 -0.0873333333333333 -0.198 0.365186619539519 0.127793909627409 -0.988138263020215 -1.79645224737888 E7EVA0 NotFound E7EVA0.S297.p_NotFound E7EVA0_S297s _1_1_297_297 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2|P27816-5 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21305.21305.2 17.95 17.95 2.9 3 1 1 0 1158.1286 2235.2873 S297s TMT10 294 (K) DMEsPTKLDVTLAK (D) DMES(0.99)PT(0.0)KLDVT(0.0)LAK K:TMT10,s:Phosphorylated S MAP4 246695.2 28 7 38.1 865.62 HUMAN 1 -4.3749 -8.9349 ALALDLGSPAALREW-p Q8TER5;S931-p ALALDLGSPAALREW 0.950466896477293 0.0270287305178499 0.00933333333333332 -0.355333333333333 0.436684393555552 21.2796996782744 0.00933333333333332 -0.355333333333333 0.904339625251584 0.00744783475118686 0.125922573137936 -4.15492049025202 Q8TER5 ARHGEF40 Q8TER5.S931.p_ARHGEF40 Q8TER5_S931s _1_1_931_931 Q8TER5 Q8TER5|Q8TER5-3 Rho guanine nucleotide exchange factor 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27922.27922.3 14.63 11.43 99 1 1 1 0 702.3719 2025.1443 S931s TMT10 924 (R) ALALDLGsPAALREWGR (C) ALALDLGS(1.0)PAALREWGR s:Phosphorylated S ARHGEF40 166366.2 1 2 2483.1 81.7 HUMAN 1 0.4367 -21.2797 ALALRARSTSATDTH-p O14874;S31-p ALALRARSTSATDTH 0.097259252567129 0.00582930989626683 0.311333333333333 0.636 21.4639691128342 32.2976876297231 0.311333333333333 0.636 0.00713843630462888 0.000589157264480535 4.20041726110116 7.15033522057201 O14874 BCKDK O14874.S31.p_BCKDK O14874_S31s _1_1_31_31 O14874 O14874|O14874-3|O14874-2|H3BS02 [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4759.4759.2 13.55 13.55 2.195 5 1 1 0 926.4164 1771.8595 S31s TMT10 31 (R) sTSATDTHHVEMAR (E) S(0.99)T(0.0)S(0.0)AT(0.0)DT(0.0)HHVEMAR s:Phosphorylated S BCKDK 46644.9 4 1 5553.1 18.24 HUMAN 1 21.464 32.2977 ALAPAKESPRKGAAP-p E7ETY2;S906-p ALAPAKESPRKGAAP 0.664425582516381 0.00101854180503129 0.0803333333333333 -1.198 3.32226387919015 51.9781992761051 0.0803333333333334 -1.198 0.465343457238415 6.34132588417726e-06 0.785140992643838 -17.0925049999657 E7ETY2 TCOF1 E7ETY2.S906.p_TCOF1 E7ETY2_S906s _1_1_906_906 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2|Q13428-5 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8230.8230.2 14.58 14.58 99 1 1 1 0 1003.5925 1926.2103 S906s TMT10 898 (R) AALAPAKEsPRK (G) AALAPAKES(1.0)PRK K:TMT10,s:Phosphorylated S TCOF1 152529.5 14 20 19.1 1034.65 HUMAN 1 3.3223 -51.9782 ALAQKRLSENAFDLE-p P18583-5;S2238-p ALAQKRLSENAFDLE 0.37492275398005 0.105201111699818 -0.119333333333333 -0.177 7.88855379099001 12.9197957286923 -0.119333333333333 -0.177 0.162609015676351 0.0510529012248358 -1.61582155580474 -2.49526557211597 P18583 SON P18583.5.S2238.p_SON P18583-5_S2238s _1_1_2238_2238 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-10|P18583-2|J3QSZ5 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27763.27763.3 19.09 19.09 12.868 2 1 1 0 769.3677 2226.1208 S2238s TMT10 2236 (K) RLsENAFDLEAMSMLNR (A) RLS(0.99)ENAFDLEAMS(0.0)MLNR s:Phosphorylated S SON 267429.6 2 40 45.1 778.56 HUMAN 1 -7.8886 -12.9198 ALASLDESQEGHAEA-p Q9H814;S368-p ALASLDESQEGHAEA 0.430759668369872 0.573589630880233 -0.185666666666667 0.054 6.73533427026366 3.25491150040893 -0.185666666666667 0.054 0.212063816431589 0.472616467676463 -1.41460061133531 0.771615059989987 Q9H814 PHAX Q9H814.S368.p_PHAX Q9H814_S368s _1_1_368_368 Q9H814 Q9H814 Phosphorylated adapter RNA export protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22712.22712.5 27.34 27.34 1.147 8 1 1 0 920.0242 4516.0912 S368s TMT10 340 (K) SLNFQEDDDTSRETFASDTNEALASLDEsQEGHAEAK (L) S(0.0)LNFQEDDDT(0.0)S(0.0)RET(0.0)FAS(0.0)DT(0.0)NEALAS(0.0)LDES(0.99)QEGHAEAK K:TMT10,s:Phosphorylated S PHAX 44573 3 5 2401.1 85.13 HUMAN 1 -6.7353 3.2549 ALAVPPPTPTKAAPP-p O75398;T432-p ALAVPPPTPTKAAPP 0.310725057904401 0.0611776029234564 -0.154666666666667 -0.215666666666667 9.48888533049511 16.1568880770632 -0.154666666666667 -0.215666666666667 0.112489365452968 0.0242276444887266 -1.89303201912121 -3.09615830061993 O75398 DEAF1 O75398.T432.p_DEAF1 O75398_T432t _1_1_432_432 O75398 O75398|O75398-3|O75398-4|O75398-5 Deformed epidermal autoregulatory factor 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.34672.34672.3 15.5 15.5 2 4 1 1 0 785.1354 2273.4249 T432t TMT10 418 (K) IVLTSLPALAVPPPtPTK (A) IVLT(0.0)S(0.0)LPALAVPPPT(0.99)PT(0.0)K K:TMT10,t:Phosphorylated T DEAF1 60239.3 2 4 3263.1 55.6 HUMAN 1 -9.4889 -16.1569 ALAVRRQSIPEEFKG-p Q9Y3R0-2;S43-p ALAVRRQSIPEEFKG 0.97076436181379 0.119464099601837 0.011 0.206666666666667 0.254214509893893 12.1688549104087 0.011 0.206666666666667 0.943145178723797 0.0606896326799197 0.0746895628852583 2.36112334864928 Q9Y3R0 GRIP1 Q9Y3R0.2.S43.p_GRIP1 Q9Y3R0-2_S43s _1_1_43_43 Q9Y3R0-2 Q9Y3R0|Q9Y3R0-2|Q9Y3R0-3 Isoform 2 of Glutamate receptor-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23352.23352.4 13.04 13.04 2.716 3 1 1 0 712.1472 2765.5838 S43s TMT10 41 (R) RQsIPEEFKGSTVVELMK (K) RQS(0.99)IPEEFKGS(0.0)T(0.0)VVELMK K:TMT10,s:Phosphorylated S GRIP1 121491.7 5 1 1840.1 111.69 HUMAN 1 0.2542 12.1689 ALAVVDVTKRHVDLK-p A0A0A0MTS7;T16764-p ALAVVDVTKRHVDLK 0.766667060694937 0.172383531585638 0.400666666666667 0.801333333333333 2.21148877016627 10.0370045667569 0.400666666666667 0.801333333333334 0.600967689243109 0.0991515581191517 0.555144556383311 1.98733314891392 A0A0A0MTS7 TTN A0A0A0MTS7.T16764.p_TTN A0A0A0MTS7_T16764t_1_1_16764_16764 A0A0A0MTS7 Q8WZ42-12|A0A0A0MTS7|Q8WZ42-13|Q8WZ42-8|Q8WZ42-2|Q8WZ42-7|Q8WZ42-4|Q8WZ42-11|Q8WZ42-5|Q8WZ42-9|A0A0A0MRA3 Titin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35582.35582.4 7.54 2.56 6.156 9 1 1 0 1248.6277 4910.5715 N16729n T16764t Hydrogen 16725 (R) VAAEnAIGQSDYTEIEDSVLAKDTFTTPGPPYALAVVDVtKR (H) VAAEN(1.0)AIGQS(0.0)DY(0.0)T(0.0)EIEDS(0.0)VLAKDT(0.0)FT(0.0)T(0.0)PGPPY(0.0)ALAVVDVT(0.99)KR K:TMT10-Lys-Only,n:Deamidated,t:Phosphorylated T TTN 4024362.5 1 6 1796.1 114.24 HUMAN 1 2.2115 10.037 ALCLDSDSEDELKRS-p Q86T82;S652-p ALCLDSDSEDELKRS 0.690327027485583 0.00248584650157384 0.0713333333333333 -0.703666666666667 3.0168526611739 39.8513266260357 0.0713333333333334 -0.703666666666667 0.499246160856334 0.000103482601326574 0.723833189860232 -10.0646893821542 Q86T82 USP37 Q86T82.S652.p_USP37 Q86T82_S650sS652s_2_2_650_652 Q86T82 Q86T82|Q86T82-2 Ubiquitin carboxyl-terminal hydrolase 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21742.21742.4 9.94 9.94 8.047 4 2 2 0 639.7996 2396.2379 S650s S652s TMT10 642 (K) SSLALCLDsDsEDELKR (S) S(0.0)S(0.0)LALCLDS(0.99)DS(0.99)EDELKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S USP37 111080.6 2 7 1897.1 108.46 HUMAN 1 3.0169 -39.8513 ALDGGVASAASPESK-p A0A0J9YWL0;S480-p ALDGGVASAASPESK 0.872158487982599 0.0561962429280599 0.0256666666666667 -0.219666666666667 1.16245095988093 16.6596789557982 0.0256666666666666 -0.219666666666667 0.76516466101835 0.0215790392233222 0.314145399724856 -3.19353013896819 A0A0J9YWL0 NotFound A0A0J9YWL0.S480.p_NotFound A0A0J9YWL0_S480s _1_1_480_480 A0A0J9YWL0 A0A0J9YWL0|Q9Y4K1 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14424.14424.4 10.03 10.03 2.757 5 1 1 0 692.1228 2685.5026 S480s TMT10 472 (R) AALDGGVAsAASPESKPSPGTK (G) AALDGGVAS(0.99)AAS(0.0)PES(0.0)KPS(0.0)PGT(0.0)K K:TMT10,s:Phosphorylated S CRYBG1 233643.7 5 12 79.1 640.71 HUMAN 1 1.1625 -16.6597 ALDISLSSGEEDEGD-p Q8IY81;S336-p ALDISLSSGEEDEGD 0.936755359874379 0.0161347105288124 -0.0153333333333333 0.582666666666667 0.552090492575649 24.7504807443215 -0.0153333333333334 0.582666666666667 0.880624878923185 0.00334928362053004 -0.157415105110488 4.97472908657257 Q8IY81 FTSJ3 Q8IY81.S336.p_FTSJ3 Q8IY81_S335sS336s_2_2_335_336 Q8IY81 Q8IY81 pre-rRNA processing protein FTSJ3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23960.23960.3 17.4 17.4 2.311 7 2 2 0 1058.7876 3014.4214 S335s S336s TMT10 329 (K) ALDISLssGEEDEGDEEDSTAGTTK (Q) ALDIS(0.0)LS(0.99)S(0.99)GEEDEGDEEDS(0.0)T(0.0)AGT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S FTSJ3 96956.1 4 8 631.1 257.01 HUMAN 1 -0.5521 24.7505 ALDQTPGSSMDNLDS-p Q9HCK4-3;S1259-p ALDQTPGSSMDNLDS 0.310133831979954 0.524712536761929 0.163 0.0653333333333334 9.50520955262904 3.76338403651172 0.163 0.0653333333333333 0.112067335091292 0.42039892453871 1.89586114164712 0.871479830384678 Q9HCK4 ROBO2 Q9HCK4.3.S1259.p_ROBO2 Q9HCK4-3_S1259sS1260s_2_2_1259_1260 Q9HCK4-3 Q9HCK4-3|A0A087WWM5 Isoform 3 of Roundabout homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22578.22578.3 12.93 12.93 2.586 6 2 2 0 881.0683 2481.2543 S1259s S1260s TMT10 1252 (R) ALDQTPGssMDNLDSSVTGK (A) ALDQT(0.0)PGS(0.99)S(0.99)MDNLDS(0.0)S(0.0)VT(0.0)GK K:TMT10,s:Phosphorylated S ROBO2 153915.7 3 6 2233.1 92.45 HUMAN 1 9.5052 3.7634 ALDSDGDSDDGEDGR-p S5FZ81;S301-p ALDSDGDSDDGEDGR 0.96694291390501 0.11220872848027 0.0106666666666667 0.230333333333333 0.283314896229243 12.5334115104583 0.0106666666666667 0.230333333333333 0.936846654767155 0.055803167228733 0.0829852613254615 2.42604584268532 S5FZ81 NotFound S5FZ81.S301.p_NotFound S5FZ81_S297sS301s_2_2_297_301 S5FZ81 Q8WUB8|Q8WUB8-2|Q8WUB8-3|S5FZ81 PHD finger protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35328.35733.4 14.78 14.78 2.432 5 2 2 0 1152.5286 4447.1353 S297s S301s TMT10 276 (R) YLPLNTALYEPPLDPELPALDsDGDsDDGEDGRGDEK (R) Y(0.0)LPLNT(0.0)ALY(0.0)EPPLDPELPALDS(0.99)DGDS(0.99)DDGEDGRGDEK K:TMT10,s:Phosphorylated S PHF10 42782.4 3 11 1372.1 149.1 HUMAN 1 0.2833 12.5334 ALDYVELSPLTQASP-p Q9H2D6;S1949-p ALDYVELSPLTQASP 0.491261982575074 0.0670960812017507 0.109 -0.298666666666667 5.68335829983928 15.6056651247765 0.109 -0.298666666666667 0.270186826320433 0.0275063831071404 1.22794432281686 -2.99078579576424 Q9H2D6 TRIOBP Q9H2D6.S1949.p_TRIOBP Q9H2D6_S1949s _1_1_1949_1949 Q9H2D6 Q9H2D6|Q9H2D6-2|Q9H2D6-3|Q9H2D6-7|Q9H2D6-5|Q9H2D6-6 TRIO and F-actin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24829.24829.3 17.34 17.34 3.933 4 1 1 0 775.7287 2245.2026 S1949s TMT10 1941 (R) QALDYVELsPLTQASPQR (A) QALDY(0.0)VELS(0.99)PLT(0.0)QAS(0.0)PQR s:Phosphorylated S TRIOBP 264280.7 3 4 1168.1 170.4 HUMAN 1 5.6834 -15.6057 ALEAESESLDSFTAD-p Q96C24;S201-p ALEAESESLDSFTAD 0.764738958266359 0.0128787446023325 0.0516666666666667 0.369 2.23617053133786 26.3227308330818 0.0516666666666667 0.369 0.597561965212493 0.00233199125076985 0.56049095752701 5.37959297047031 Q96C24 SYTL4 Q96C24.S201.p_SYTL4 Q96C24_S201sS204s_2_2_201_204 Q96C24 Q96C24|Q96C24-2 Synaptotagmin-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20316.20316.3 17.88 17.88 2.458 9 2 2 0 898.7028 2534.1579 S201s S204s TMT10 193 (K) SALEAESEsLDsFTADSDSTSR (R) S(0.0)ALEAES(0.0)ES(0.99)LDS(0.99)FT(0.0)ADS(0.0)DS(0.0)T(0.0)S(0.0)R s:Phosphorylated S SYTL4 76649.8 3 10 1078.1 180.34 HUMAN 1 2.2362 26.3227 ALEARLVSLYFDTKR-p O00231-2;S135-p ALEARLVSLYFDTKR 0.205489455095731 0.245249175278167 -0.217 0.188666666666667 13.2872868271541 8.04341265069778 -0.217 0.188666666666667 0.0469106355966987 0.156912931071894 -2.562965651033 1.64216724871171 O00231 PSMD11 O00231.2.S135.p_PSMD11 O00231-2_S135s _1_1_135_135 O00231-2 O00231-2 Isoform 2 of 26S proteasome non-ATPase regulatory subunit 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30690.30690.3 11 11 2.422 3 1 1 0 541.9661 1543.9136 S135s TMT10 133 (R) LVsLYFDTK (R) LVS(0.99)LY(0.0)FDT(0.0)K K:TMT10,s:Phosphorylated S PSMD11 47819.3 1 3 2992.1 63.85 HUMAN 1 -13.2873 8.0434 ALEAVGGTVVLE___-p P52815;T194-p ALEAVGGTVVLE___ 0.362971528924294 0.666782257651587 0.144666666666667 0.0993333333333333 8.172633828739 2.40892855777038 0.144666666666667 0.0993333333333334 0.15231287547231 0.574258119201254 1.66509538216483 0.597496805671772 P52815 MRPL12 P52815.T194.p_MRPL12 P52815_T194t _1_1_194_194 P52815 P52815 39S ribosomal protein L12, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.4840.4840.2 7.54 2.41 99 1 1 1 0 769.4102 1457.8413 T194t TMT10 186 (K) AALEAVGGtVVLE (-) AALEAVGGT(1.0)VVLE t:Phosphorylated T MRPL12 21576 1 1 7136.1 7.54 HUMAN 1 8.1726 2.4089 ALEAVTPSPSFQQRH-p Q9UKG1;S401-p ALEAVTPSPSFQQRH 0.306383440584975 0.976079766062257 0.174333333333333 0.00533333333333336 9.62640621840167 0.14965491190276 0.174333333333333 0.00533333333333337 0.108983155459957 0.96612764393128 1.91687107637118 0.0444620833877163 Q9UKG1 APPL1 Q9UKG1.S401.p_APPL1 Q9UKG1_S401s _1_1_401_401 Q9UKG1 Q9UKG1 DCC-interacting protein 13-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19098.19098.3 20.41 20.41 2.431 4 1 1 0 756.7097 2188.156 S401s TMT10 390 (R) VNQSALEAVTPsPSFQQR (H) VNQS(0.0)ALEAVT(0.0)PS(0.99)PS(0.0)FQQR s:Phosphorylated S APPL1 80346.7 4 1 1784.1 115.11 HUMAN 1 9.6264 0.1497 ALECKTVSPDEITTR-p Q8NG31;S956-p ALECKTVSPDEITTR 0.913226544765155 0.00956560024781388 -0.0163333333333333 -0.419666666666667 0.768815856027304 28.4843148549162 -0.0163333333333333 -0.419666666666667 0.837757673347729 0.00141764834269328 -0.214838742784595 -5.97505718235831 Q8NG31 CASC5 Q8NG31.S956.p_CASC5 Q8NG31_S956s _1_1_956_956 Q8NG31 Q8NG31|Q8NG31-2|Q8NG31-4|Q8NG31-3|E9PPJ1 Kinetochore scaffold 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15190.15190.3 12.4 12.4 2.199 4 1 1 0 710.0314 2048.1098 S956s TMT10 954 (K) TVsPDEITTRPMDK (T) T(0.0)VS(0.99)PDEIT(0.0)T(0.0)RPMDK K:TMT10,s:Phosphorylated S KNL1 268353.4 2 8 650.1 254.2 HUMAN 1 -0.7688 -28.4843 ALEDDMESQLDGSLI-p Q92692-2;S465-p ALEDDMESQLDGSLI 0.902006058729547 0.298906200475319 0.0216666666666667 -0.0993333333333333 0.880213730093034 6.92507230907923 0.0216666666666667 -0.0993333333333333 0.816542185738236 0.20299847207777 0.24355537871264 -1.44749541263758 Q92692 PVRL2 Q92692.2.S465.p_PVRL2 Q92692-2_S465s _1_1_465_465 Q92692-2 Q92692-2 Isoform Alpha of Nectin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.35509.35509.3 20.51 16.89 4.534 3 1 1 0 997.4855 2910.479 S465s TMT10 450 (K) GLMLPPPPALEDDMEsQLDGSLISR (R) GLMLPPPPALEDDMES(0.99)QLDGS(0.0)LIS(0.0)R s:Phosphorylated S NECTIN2 51700.6 10 1 4295.1 34.06 HUMAN 1 0.8802 -6.9251 ALEGAPHTPPLPRRP-p Q9H0X6;T91-p ALEGAPHTPPLPRRP 0.234733568977743 0.374873665258011 0.215666666666667 -0.0876666666666666 12.0707194663752 5.65603213692127 0.215666666666667 -0.0876666666666667 0.0620766187564087 0.271892223484815 2.34488453545447 -1.22276166082158 Q9H0X6 RNF208 Q9H0X6.T91.p_RNF208 Q9H0X6_T91t_1_1_91_91 Q9H0X6 Q9H0X6 RING finger protein 208 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23662.23662.4 18.47 14.28 18.468 3 1 1 0 966.7239 3782.8944 N75n T91t TMT10 64 (K) RAWPSDTEIIVnQACGGDMPALEGAPHtPPLPR (R) RAWPS(0.0)DT(0.0)EIIVN(1.0)QACGGDMPALEGAPHT(0.99)PPLPR C:Carbamidomethylation,n:Deamidated,t:Phosphorylated T RNF208 28876.6 5 1 3762.1 43.68 HUMAN 1 12.0707 -5.656 ALEGVVLSPSLEARV-p Q9NVI7;S369-p ALEGVVLSPSLEARV 0.224767265517543 0.14513655414334 0.206333333333333 0.255666666666667 12.449362631253 11.0394781834049 0.206333333333333 0.255666666666667 0.0568936421586042 0.0787140361062053 2.41230210031746 2.16204826144466 Q9NVI7 ATAD3A Q9NVI7.S369.p_ATAD3A Q9NVI7_S369s _1_1_369_369 Q9NVI7 Q9NVI7|Q9NVI7-2|Q9NVI7-3 ATPase family AAA domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26617.26617.4 17.13 14.71 3.37 3 1 1 0 640.5988 2479.4082 S369s TMT10 355 (R) LLSRPQDALEGVVLsPSLEAR (V) LLS(0.0)RPQDALEGVVLS(0.99)PS(0.0)LEAR s:Phosphorylated S ATAD3A 71653.2 1 2 4095.1 37.77 HUMAN 1 12.4494 11.0395 ALELNMLSLKGHRSV-p Q9Y617;S331-p ALELNMLSLKGHRSV 0.288149464288374 0.371689585705598 -0.228333333333333 0.201 10.1927806684853 5.70305673038868 -0.228333333333333 0.201 0.095658140233549 0.268964106548293 -2.01522384622656 1.23120012888454 Q9Y617 PSAT1 Q9Y617.S331.p_PSAT1 Q9Y617_S331s _1_1_331_331 Q9Y617 Q9Y617 Phosphoserine aminotransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30351.30351.3 9.88 7.48 99 1 1 1 0 557.3178 1589.9701 S331s TMT10 324 (K) ALELNMLsLK (G) ALELNMLS(1.0)LK K:TMT10,s:Phosphorylated S PSAT1 40821.3 1 2 3767.1 43.58 HUMAN 1 -10.1928 5.7031 ALEMDRKSVEGRPMF-p Q15020;S769-p ALEMDRKSVEGRPMF 0.90552186362789 0.00365207812189789 -0.021 0.605 0.84693612369676 36.1953855147133 -0.021 0.605 0.82282293330995 0.000240138309234619 -0.235030624764067 8.54486374951566 Q15020 SART3 Q15020.S769.p_SART3 Q15020_S769s _1_1_769_769 Q15020 Q15020|Q15020-4 Squamous cell carcinoma antigen recognized by T-cells 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18784.18784.3 14.52 9.22 5.887 2 1 1 0 749.3755 2166.1452 S769s TMT10 769 (K) sVEGRPMFVSPCVDK (S) S(0.99)VEGRPMFVS(0.0)PCVDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SART3 110788.4 2 2 2466.1 82.09 HUMAN 1 -0.8469 36.1954 ALENDDRSEEEKYTA-p Q99700;S466-p ALENDDRSEEEKYTA 0.605650171576433 0.127212784009323 -0.13 0.158 4.02485298847105 11.8042755185128 -0.13 0.158 0.395835463898863 0.0660043332206738 -0.921877302635142 2.29654195291805 Q99700 ATXN2 Q99700.S466.p_ATXN2 Q99700_S466s _1_1_466_466 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12563.12563.4 18.16 11.01 4.365 3 1 1 0 698.348 2710.4048 S466s TMT10 458 (R) VALENDDRsEEEKYTAVQR (N) VALENDDRS(0.99)EEEKY(0.0)T(0.0)AVQR K:TMT10,s:Phosphorylated S ATXN2 140907.9 5 3 176.1 481.52 HUMAN 1 -4.0249 11.8043 ALEPRQASQGMVGQL-p Q9Y230;S43-p ALEPRQASQGMVGQL 0.300478673172259 0.53215942032336 0.177333333333333 0.0593333333333334 9.81655886122753 3.68327305549626 0.177333333333333 0.0593333333333334 0.104314363843608 0.428225666959611 1.94985738552479 0.855944421034486 Q9Y230 RUVBL2 Q9Y230.S43.p_RUVBL2 Q9Y230_S43s _1_1_43_43 Q9Y230 Q9Y230|X6R2L4 RuvB-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13436.13436.2 12.84 6.81 99 1 1 1 0 813.4058 1545.8369 S43s TMT10 41 (R) QAsQGMVGQLAAR (R) QAS(1.0)QGMVGQLAAR s:Phosphorylated S RUVBL2 51326.8 1 1 1680.1 121.4 HUMAN 1 9.8166 3.6833 ALESPAKSPASSSSK-p Q9NS91;S103-p ALESPAKSPASSSSK 0.848303400988284 0.00991769079995784 0.046 -0.673 1.38034301617846 28.1727812503919 0.046 -0.673 0.727722325015582 0.00152307705285789 0.366738526835582 -5.8862951996805 Q9NS91 RAD18 Q9NS91.S103.p_RAD18 Q9NS91_S99sS103s_2_2_99_103 Q9NS91 Q9NS91|F8WE49 E3 ubiquitin-protein ligase RAD18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22045.22045.5 17.61 17.61 1.343 6 2 2 0 610.1186 2886.6292 S99s S103s TMT10 90 (R) NHLLQFALEsPAKsPASSSSK (N) NHLLQFALES(0.99)PAKS(0.99)PAS(0.0)S(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S RAD18 57077.5 3 7 1349.1 151 HUMAN 1 1.3803 -28.1728 ALESRVESIQRVLAD-p Q9NQP4;S107-p ALESRVESIQRVLAD 0.988249774094156 0.628050273855878 -0.00333333333333335 0.0526666666666667 0.105705523524747 2.74710733832288 -0.00333333333333336 0.0526666666666667 0.975954223059945 0.531238162891536 -0.0315601305835893 0.668472228599356 Q9NQP4 PFDN4 Q9NQP4.S107.p_PFDN4 Q9NQP4_S107s _1_1_107_107 Q9NQP4 E9PQY2|Q9NQP4 Prefoldin subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30478.30478.3 17.28 12.83 1.104 2 1 1 0 813.4072 2358.2462 S107s TMT10 93 (K) NLQEEIDALESRVEsIQR (V) NLQEEIDALES(0.0)RVES(0.99)IQR s:Phosphorylated S PFDN4 15428.1 1 2 4182.1 35.86 HUMAN 1 -0.1057 2.7471 ALETIPITPVERNYT-p Q2LD37;T3996-p ALETIPITPVERNYT 0.864558479034887 0.135136659705656 0.025 -0.186666666666667 1.23060345422861 11.4588531138622 0.025 -0.186666666666667 0.753250891895492 0.0714685035390352 0.330762897030665 -2.23564431413881 Q2LD37 KIAA1109 Q2LD37.T3996.p_KIAA1109 Q2LD37_T3996t _1_1_3996_3996 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21955.21955.2 16.13 15.31 3.819 2 1 1 0 824.4503 1567.9257 T3996t TMT10 3989 (K) ALETIPItPVER (N) ALET(0.0)IPIT(0.99)PVER t:Phosphorylated T KIAA1109 559693.9 2 25 143.1 520.8 HUMAN 1 1.2306 -11.4589 ALEVRRQSLATKIQA-p O00159-3;S717-p ALEVRRQSLATKIQA 0.182722695333724 0.0146250368029414 0.251333333333333 0.523333333333333 14.5162987812157 25.4123691694137 0.251333333333333 0.523333333333333 0.0353484293895711 0.00287582916034366 2.78821525972572 5.14242430415275 O00159 MYO1C O00159.3.S717.p_MYO1C O00159-3_S717s _1_1_717_717 O00159-3 O00159|O00159-3|F5H6E2|O00159-2 Isoform 3 of Unconventional myosin-Ic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4088.4088.2 7.96 7.96 2.22 2 1 1 0 556.8053 1032.6363 S717s Hydrogen 715 (R) RQsLATK (I) RQS(0.99)LAT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S MYO1C 120424.7 2 7 296.4 379.15 HUMAN 1 14.5163 25.4124 ALFPEVFSPTPDENS-p Q8IVT2;S575-p ALFPEVFSPTPDENS 0.702689989895341 0.554743243006358 0.0523333333333333 -0.0786666666666666 2.88060751776824 3.44822981334519 0.0523333333333333 -0.0786666666666666 0.515156576278466 0.452040158642363 0.696056230633148 -0.809947075905895 Q8IVT2 MISP Q8IVT2.S575.p_MISP Q8IVT2_S575s _1_1_575_575 Q8IVT2 Q8IVT2 Mitotic interactor and substrate of PLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26660.26660.3 19.47 19.47 1.133 4 1 1 0 891.7385 2593.2368 S575s TMT10 567 (R) NALFPEVFsPTPDENSDQNSR (S) NALFPEVFS(0.99)PT(0.0)PDENS(0.0)DQNS(0.0)R s:Phosphorylated S MISP 75526.3 2 17 490.1 294.31 HUMAN 1 2.8806 -3.4482 ALFRALQSPALGLRG-p P46940;S330-p ALFRALQSPALGLRG 0.196036533561212 0.00687614048228366 -0.409 0.630666666666667 13.7898276306979 31.0139223411815 -0.409 0.630666666666667 0.0417846950453454 0.000791785904093537 -2.65441096685817 6.73548825849285 P46940 IQGAP1 P46940.S330.p_IQGAP1 P46940_S330s _1_1_330_330 P46940 P46940|A0A0J9YXZ5 Ras GTPase-activating-like protein IQGAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17602.17602.2 14.79 11.38 99 1 1 1 0 667.8738 1254.7731 S330s TMT10 327 (R) ALQsPALGLR (G) ALQS(1.0)PALGLR s:Phosphorylated S IQGAP1 189876.1 3 4 1386.1 147.7 HUMAN 1 -13.7898 31.0139 ALGAVIASSKKAKRD-p Q8IY81;S676-p ALGAVIASSKKAKRD 0.464580855820502 0.00413791477536262 0.153666666666667 -0.614666666666667 6.14289690093733 35.0947440225786 0.153666666666667 -0.614666666666667 0.243058218218674 0.000309403767568843 1.30997977668657 -8.12915769294949 Q8IY81 FTSJ3 Q8IY81.S676.p_FTSJ3 Q8IY81_S676s _1_1_676_676 Q8IY81 Q8IY81 pre-rRNA processing protein FTSJ3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34206.34206.3 19.82 17.7 1.253 2 1 1 0 731.4158 2112.268 S676s TMT10 662 (R) ILDPEGLALGAVIAsSK (K) ILDPEGLALGAVIAS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S FTSJ3 96956.1 3 6 631.1 257.01 HUMAN 1 6.1429 -35.0947 ALGLGLVSPAQLRVF-p I3L448;S63-p ALGLGLVSPAQLRVF 0.787828576236821 0.0416962114728447 -0.05 -0.272666666666667 1.99884347053472 18.4948149200372 -0.05 -0.272666666666667 0.631125391269148 0.0141422499273246 -0.50854590338912 -3.5600916685564 I3L448 ATPAF1 I3L448.S63.p_ATPAF1 I3L448_S63s _1_1_63_63 I3L448 I3L448|Q5TC12|A8MRA7 ATP synthase mitochondrial F1 complex assembly factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27427.27427.3 12.76 12.76 99 1 1 1 0 535.3104 1523.9471 S63s TMT10 56 (R) ALGLGLVsPAQLR (V) ALGLGLVS(1.0)PAQLR s:Phosphorylated S ATPAF1 39202.7 2 1 4610.1 28.82 HUMAN 1 -1.9988 -18.4948 ALGLSGGSLVSMLAR-p M0R0U3;S49-p ALGLSGGSLVSMLAR 0.952209593971326 0.427089572248459 -0.011 0.124333333333333 0.422104617250973 4.9179497162326 -0.011 0.124333333333333 0.907380701454761 0.322258980167165 -0.121895526139418 1.08878328575128 M0R0U3 NotFound M0R0U3.S49.p_NotFound M0R0U3_S49s _1_1_49_49 M0R0U3 O95336|M0R0U3 6-phosphogluconolactonase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37129.37129.3 19.61 19.61 3.305 3 1 1 0 630.0038 1808.0302 S49s TMT10 41 (R) FALGLSGGsLVSMLAR (E) FALGLS(0.0)GGS(0.99)LVS(0.0)MLAR s:Phosphorylated S PGLS 19139.6 4 2 3593.1 47.5 HUMAN 1 -0.4221 4.9179 ALGPRRDSDLGKEPK-p P29536;S119-p ALGPRRDSDLGKEPK 0.909730068953154 0.00167082213187757 -0.0186666666666667 0.944666666666667 0.806605376660337 44.1117127913866 -0.0186666666666667 0.944666666666667 0.830499666393278 3.87997315571885e-05 -0.224638184395738 12.1448724230671 P29536 LMOD1 P29536.S119.p_LMOD1 P29536_S119s _1_1_119_119 P29536 P29536|P29536-2|Q9BV00 Leiomodin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6814.6814.4 10.66 10.66 99 1 1 1 0 478.7685 1832.0845 S119s TMT10 117 (R) RDsDLGKEPK (R) RDS(1.0)DLGKEPK K:TMT10,s:Phosphorylated S LMOD1 67200.1 2 2 2749.1 71.87 HUMAN 1 -0.8066 44.1117 ALGSGEESPLEGW__-p Q9NX74;S488-p ALGSGEESPLEGW__ 0.753798776538717 0.144392002130953 0.0466666666666667 0.231333333333333 2.3446540376831 11.0708220254345 0.0466666666666667 0.231333333333333 0.58282020085161 0.0781479873366784 0.58384415235282 2.16753694503195 Q9NX74 DUS2 Q9NX74.S488.p_DUS2 Q9NX74_S488s _1_1_488_488 Q9NX74 Q9NX74|E7EUN9 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30571.30777.3 16.06 16.06 6.575 2 1 1 0 781.068 2261.2218 S488s TMT10 477 (K) KPFVALGSGEEsPLEGW (-) KPFVALGS(0.0)GEES(0.99)PLEGW K:TMT10,s:Phosphorylated S DUS2 55848.1 4 3 4148.1 36.68 HUMAN 1 2.3447 11.0708 ALHLAAKYGHALCLQ-p Q9BZF9;Y111-p ALHLAAKYGHALCLQ 0.726261487694244 0.230633140288086 -0.0586666666666667 0.180333333333333 2.63412221902438 8.39095965940417 -0.0586666666666667 0.180333333333333 0.545240086592025 0.144845175416684 -0.645065601226247 1.70235550642217 Q9BZF9 UACA Q9BZF9.Y111.p_UACA Q9BZF9_Y111y _1_1_111_111 Q9BZF9 Q9BZF9|Q9BZF9-2|H0YNH8|F5H2B9 Uveal autoantigen with coiled-coil domains and ankyrin repeats GG20160819_MSz_CCLE_T4D7_pY_Injection_02.13651.13654.3 15.7 15.7 99 1 1 1 0 543.2862 1547.8768 Y111y TMT10 111 (K) yGHALCLQK (L) Y(1.0)GHALCLQK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y UACA 163643.6 3 1 228.1 15.7 HUMAN 1 -2.6341 8.391 ALHQHGHSGPFESKF-p Q7Z5L9;S318-p ALHQHGHSGPFESKF 0.938330252894214 0.0746740062189611 -0.0123333333333333 -0.273666666666667 0.538648044801423 14.9538819670901 -0.0123333333333333 -0.273666666666667 0.883354845267922 0.0319603703579065 -0.153781086899539 -2.86794176681786 Q7Z5L9 IRF2BP2 Q7Z5L9.S318.p_IRF2BP2 Q7Z5L9_S318s _1_1_318_318 Q7Z5L9 Q7Z5L9|Q7Z5L9-2 Interferon regulatory factor 2-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14328.14328.4 12.88 12.88 3.304 3 1 1 0 628.8241 2432.3087 S318s TMT10 307 (R) DTLLALHQHGHsGPFESK (F) DT(0.0)LLALHQHGHS(0.99)GPFES(0.0)K K:TMT10,s:Phosphorylated S IRF2BP2 61765.3 2 7 154.1 504.92 HUMAN 1 -0.5386 -14.9539 ALHREYGSTSSIDRQ-p Q9P2F8;S194-p ALHREYGSTSSIDRQ 0.629861099232015 0.0194108496572423 -0.103333333333333 -0.476666666666667 3.73372601882843 23.51599583794 -0.103333333333333 -0.476666666666667 0.423279658480236 0.00445041403154646 -0.865876137594859 -4.67209356759715 Q9P2F8 SIPA1L2 Q9P2F8.S194.p_SIPA1L2 Q9P2F8_S194s _1_1_194_194 Q9P2F8 Q9P2F8 Signal-induced proliferation-associated 1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29084.29084.3 12.7 12.7 1.174 6 1 1 0 958.7809 2794.3668 S194s TMT10 191 (R) EYGsTSSIDRQGLSGENFFAMLR (G) EY(0.0)GS(0.99)T(0.0)S(0.0)S(0.0)IDRQGLS(0.0)GENFFAMLR s:Phosphorylated S SIPA1L2 192488.1 3 4 322.1 363.46 HUMAN 1 -3.7337 -23.516 ALIAQLPSPAIDHEQ-p H3BQK9;S5949-p ALIAQLPSPAIDHEQ 0.797447525031717 0.271760816776222 0.0386666666666667 -0.107333333333333 1.89654936971613 7.4523368404716 0.0386666666666667 -0.107333333333333 0.646167429050542 0.179790324370202 0.485768289923064 -1.5395296112633 H3BQK9 NotFound H3BQK9.S5949.p_NotFound H3BQK9_S5949s _1_1_5949_5949 H3BQK9 H3BQK9|H3BPE1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22962.22962.3 18.39 18.39 99 1 1 1 0 727.7272 2101.1967 S5949s TMT10 5942 (R) ALIAQLPsPAIDHEQLR (Q) ALIAQLPS(1.0)PAIDHEQLR s:Phosphorylated S MACF1 866539.7 1 10 472.1 301.95 HUMAN 1 1.8965 -7.4523 ALKAENNSEVGASGY-p Q08211;S125-p ALKAENNSEVGASGY 0.873216810979358 0.175514264161062 0.0353333333333333 0.197 1.15159021516905 9.93846118857405 0.0353333333333333 0.197 0.767080563273353 0.101427070295914 0.311482601310171 1.97022978733124 Q08211 DHX9 Q08211.S125.p_DHX9 Q08211_S125s _1_1_125_125 Q08211 Q08211 ATP-dependent RNA helicase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18475.18475.3 25.72 19.68 6.473 4 1 1 0 824.7058 2392.1367 S125s TMT10 121 (K) AENNsEVGASGYGVPGPTWDR (G) AENNS(0.99)EVGAS(0.0)GY(0.0)GVPGPT(0.0)WDR s:Phosphorylated S DHX9 142268.2 1 3 1186.1 168.77 HUMAN 1 1.1516 9.9385 ALKEEIVTPKETETS-p Q9NYV4-2;T514-p ALKEEIVTPKETETS 0.160078188700121 0.0810479927073015 -0.614333333333333 0.282 15.92559623116 14.4705646610905 -0.614333333333333 0.282 0.0255529106797567 0.0357226389264235 -3.05391698037908 2.77799745717432 Q9NYV4 CDK12 Q9NYV4.2.T514.p_CDK12 Q9NYV4-2_T514t _1_1_514_514 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17730.17730.4 13.98 8.29 3.027 5 1 1 0 925.2772 3618.1226 T514t TMT10 502 (R) DSKPIALKEEIVtPKETETSEK (E) DS(0.0)KPIALKEEIVT(0.99)PKET(0.0)ET(0.0)S(0.0)EK K:TMT10,t:Phosphorylated T CDK12 163853.1 2 22 59.1 708.76 HUMAN 1 -15.9256 14.4706 ALKGEIPSPQLTRPK-p Q8IWZ3-6;S2539-p ALKGEIPSPQLTRPK 0.19531414741951 0.743129003763426 -0.237333333333333 -0.0326666666666667 13.8315614341712 1.77819213660375 -0.237333333333333 -0.0326666666666667 0.0413850854820216 0.664019428182801 -2.66204467448178 -0.459049658145619 Q8IWZ3 ANKHD1 Q8IWZ3.6.S2539.p_ANKHD1 Q8IWZ3-6_S2539s _1_1_2539_2539 Q8IWZ3-6 Q8IWZ3-6|H7C0V5 Isoform 6 of Ankyrin repeat and KH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27212.27212.4 27.17 27.17 2.349 7 1 1 0 1161.134 4561.5267 S2539s TMT10 2511 (K) VIQNSTECTDAQQASLLPSVPALKGEIPsPQLTRPK (K) VIQNS(0.0)T(0.0)ECT(0.0)DAQQAS(0.0)LLPS(0.0)VPALKGEIPS(0.99)PQLT(0.0)RPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANKHD1 279224.1 8 40 287.1 383.69 HUMAN 1 -13.8316 -1.7782 ALKKDRESMGHRYIE-p P52597;S77-p ALKKDRESMGHRYIE 0.467657349103512 0.0590101351486798 -0.105666666666667 -0.273 6.09527578553374 16.3746737180159 -0.105666666666667 -0.273 0.245738057776263 0.0230426608722819 -1.30151843721111 -3.13818410937473 P52597 HNRNPF P52597.S77.p_HNRNPF P52597_S77s _1_1_77_77 P52597 P52597 Heterogeneous nuclear ribonucleoprotein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3421.3421.3 9.09 9.09 99 1 1 1 0 432.8627 1216.6054 S77s TMT10 74 (K) DREsMGHR (Y) DRES(1.0)MGHR s:Phosphorylated S HNRNPF 46013.4 1 9 990.1 191.56 HUMAN 1 -6.0953 -16.3747 ALKLPIPSPQRAFTL-p P54198;S687-p ALKLPIPSPQRAFTL 0.682359763170919 0.10675716433013 0.0566666666666667 0.203 3.11071346823813 12.8355930481082 0.0566666666666667 0.203 0.488572089084638 0.0520523924129927 0.742811125650736 2.48014322029477 P54198 HIRA P54198.S687.p_HIRA P54198_S687s _1_1_687_687 P54198 P54198 Protein HIRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.31704.31704.4 21.07 21.07 2.465 2 1 1 0 701.1361 2721.556 S687s TMT10 670 (K) EAMCLSAPALALKLPIPsPQR (A) EAMCLS(0.0)APALALKLPIPS(0.99)PQR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HIRA 113316.6 3 9 1371.1 149.22 HUMAN 1 3.1107 12.8356 ALKLRGRSFMNNWEV-p P08237-3;S448-p ALKLRGRSFMNNWEV 0.35580469572625 0.273277989145005 -0.135 0.168666666666667 8.34294132255257 7.42106148949848 -0.135 0.168666666666667 0.146455561340049 0.181089742442712 -1.69460568937822 1.53408521963015 P08237 PFKM P08237.3.S448.p_PFKM P08237-3_S448s _1_1_448_448 P08237-3 P08237-3|P08237-2 Isoform 3 of ATP-dependent 6-phosphofructokinase, muscle type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21098.21098.3 14.79 14.79 14.789 2 1 1 0 690.341 1989.0417 S448s TMT10 446 (R) GRsFMNNWEVYK (L) GRS(0.99)FMNNWEVY(0.0)K K:TMT10,s:Phosphorylated S PFKM 94165.2 7 1 2707.1 73.28 HUMAN 1 -8.3429 7.4211 ALKPRPKSPSSGSGG-p Q9ULD5-3;S624-p ALKPRPKSPSSGSGG 0.201147832961288 0.0123496888209154 -0.576666666666667 0.677333333333333 13.5329440028557 26.6393774726759 -0.576666666666667 0.677333333333333 0.044330803164709 0.00216801485059557 -2.60755868818308 5.46391684021572 Q9ULD5 ZNF777 Q9ULD5.3.S624.p_ZNF777 Q9ULD5-3_S624s _1_1_624_624 Q9ULD5-3 Q9ULD5-3|Q9ULD5-2 Isoform 3 of Zinc finger protein 777 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8511.8511.3 12.31 5.41 9.132 5 1 1 0 710.7124 2050.1536 S624s TMT10 624 (K) sPSSGSGGGGPKPYK (C) S(0.99)PS(0.0)S(0.0)GS(0.0)GGGGPKPY(0.0)K K:TMT10,s:Phosphorylated S ZNF777 95258 2 5 2050.1 100.48 HUMAN 1 -13.5329 26.6394 ALKQLGDSPAEDKSS-p Q9H7S9;S146-p ALKQLGDSPAEDKSS 0.394302372833987 0.151684783953619 -0.14 0.148 7.45863814302918 10.7692275722146 -0.14 0.148 0.179529650613743 0.0837678256716685 -1.54108031140081 2.11479683108367 Q9H7S9 ZNF703 Q9H7S9.S146.p_ZNF703 Q9H7S9_S146s _1_1_146_146 Q9H7S9 Q9H7S9 Zinc finger protein 703 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10141.10141.2 12.36 6.62 99 1 1 1 0 799.3958 1517.8212 S146s TMT10 142 (K) QLGDsPAEDK (S) QLGDS(1.0)PAEDK K:TMT10,s:Phosphorylated S ZNF703 58791.3 2 3 1508.1 135.43 HUMAN 1 -7.4586 10.7692 ALKSEEKTPIKKPGD-p O95793;T372-p ALKSEEKTPIKKPGD 0.148266672319898 0.00626321377104437 -0.752 -0.999666666666667 16.7771548538952 31.7468181042774 -0.752 -0.999666666666667 0.0210031538974375 0.000668833764888254 -3.21887145139254 -6.9698094187074 O95793 STAU1 O95793.T372.p_STAU1 O95793_T372t _1_1_372_372 O95793 O95793|O95793-3|O95793-2|Q5JW30 Double-stranded RNA-binding protein Staufen homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7790.7790.3 9.15 3.93 4.434 2 1 1 0 566.9943 1618.9983 T372t TMT10 368 (K) SEEKtPIK (K) S(0.0)EEKT(0.99)PIK K:TMT10,t:Phosphorylated T STAU1 63466.4 4 5 1249.1 162.06 HUMAN 1 -16.7772 -31.7468 ALKSPLQSVVVRRRS-p Q9Y2W1;S257-p ALKSPLQSVVVRRRS 0.1768008818503 0.0295255046856667 0.257333333333333 1.16466666666667 14.9242670975895 20.704950369762 0.257333333333333 1.16466666666667 0.032179055310137 0.00850168408673385 2.86425943490179 4.02796045527619 Q9Y2W1 THRAP3 Q9Y2W1.S257.p_THRAP3 Q9Y2W1_S257s _1_1_257_257 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16907.16907.2 9.61 6.94 4.511 2 1 1 0 647.3605 1213.7466 S257s TMT10 253 (K) SPLQsVVVR (R) S(0.0)PLQS(0.99)VVVR s:Phosphorylated S THRAP3 108720.9 1 62 10.2 1293.04 HUMAN 1 14.9243 20.705 ALKTVGLSLDVSRRD-p Q96Q15;S2267-p ALKTVGLSLDVSRRD 0.921583751108816 0.603360256520903 0.0243333333333333 0.057 0.695864969683096 2.97676547039864 0.0243333333333333 0.057 0.85194881470663 0.503875744625451 0.195747240406224 0.715589150881241 Q96Q15 SMG1 Q96Q15.S2267.p_SMG1 Q96Q15_S2267s _1_1_2267_2267 Q96Q15 Q96Q15|Q96Q15-2|Q96Q15-3 Serine/threonine-protein kinase SMG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15456.15456.3 9.31 9.31 3.811 3 1 1 0 504.6096 1431.8481 S2267s TMT10 2263 (K) TVGLsLDVSRR (D) T(0.0)VGLS(0.99)LDVS(0.0)RR s:Phosphorylated S SMG1 414601.1 1 3 1337.1 152.31 HUMAN 1 0.6959 2.9768 ALKVDVKSPKTKKTM-p Q09666;S5077-p ALKVDVKSPKTKKTM 0.106887733940778 0.0324665662796072 -0.322666666666667 -0.329 20.4415212195354 20.085422150175 -0.322666666666667 -0.329 0.00903333004467879 0.00980522999255521 -3.97435283034812 -3.89364358502382 Q09666 AHNAK Q09666.S5077.p_AHNAK Q09666_S5077s_1_1_5077_5077 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23496.23496.5 14.58 14.58 99 1 1 1 0 664.1798 3235.9072 N5063n S5077s TMT10 5057 (K) APDVDVnIAGPDAALKVDVKsPK (T) APDVDVN(1.0)IAGPDAALKVDVKS(1.0)PK K:TMT10,n:Deamidated,s:Phosphorylated S AHNAK 629603.7 10 116 1.1 4313.36 HUMAN 1 -20.4415 -20.0854 ALLEVVQSGGKNIEL-p O14818;S201-p ALLEVVQSGGKNIEL 0.198589991699611 0.659595289647399 -0.215666666666667 -0.0723333333333333 13.6691274023242 2.47232680922788 -0.215666666666667 -0.0723333333333333 0.0429622739200349 0.565935997613734 -2.63236802573649 -0.61095802356801 O14818 PSMA7 O14818.S201.p_PSMA7 O14818_S201s _1_1_201_201 O14818 Q8TAA3-5|O14818|A0A087WYS6|Q8TAA3-2|O14818-2 Proteasome subunit alpha type-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23355.23355.3 9.54 7.34 99 1 1 1 0 546.9783 1558.9569 S201s TMT10 194 (K) ALLEVVQsGGK (N) ALLEVVQS(1.0)GGK K:TMT10,s:Phosphorylated S PSMA7 28057.5 1 3 2979.1 64.18 HUMAN 1 -13.6691 -2.4723 ALLGAQLSPARRRQH-p P51788;S641-p ALLGAQLSPARRRQH 0.376065302166163 0.152593249738808 0.258666666666667 0.709 7.85444980682479 10.7374075579536 0.258666666666667 0.709 0.163890967612683 0.0843838321415487 1.6099010050503 2.10924150854659 P51788 CLCN2 P51788.S641.p_CLCN2 P51788_S641s _1_1_641_641 P51788 P51788|P51788-3|P51788-5|P51788-4 Chloride channel protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26313.26313.3 15.67 14.12 15.063 2 1 1 0 607.007 1739.0377 S641s TMT10 630 (R) SQVVALLGAQLsPAR (R) S(0.0)QVVALLGAQLS(0.99)PAR s:Phosphorylated S CLCN2 99503.6 2 3 1767.1 116.44 HUMAN 1 7.8544 10.7374 ALLGDSGSQNWSTGT-p O43752;S129-p ALLGDSGSQNWSTGT 0.207422631751664 0.442492212808166 -0.288666666666667 -0.0973333333333333 13.186643331165 4.71501780252569 -0.288666666666667 -0.0973333333333333 0.0480104378696311 0.337674464449762 -2.54475408240196 -1.05136262427066 O43752 STX6 O43752.S129.p_STX6 O43752_S129s _1_1_129_129 O43752 O43752|O43752-2 Syntaxin-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18825.19038.3 19 19 1.206 6 1 1 0 835.4072 2424.2407 S129s TMT10 121 (R) QALLGDSGsQNWSTGTTDK (Y) QALLGDS(0.0)GS(0.99)QNWS(0.0)T(0.0)GT(0.0)T(0.0)DK K:TMT10,s:Phosphorylated S STX6 29232.5 3 2 2488.1 81.33 HUMAN 1 -13.1866 -4.715 ALLHGGGTQKPFWRH-p Q96PF1;T542-p ALLHGGGTQKPFWRH 0.332256356782789 0.741251885015411 0.149333333333333 0.0376666666666667 8.93496841499833 1.79261610337758 0.149333333333333 0.0376666666666667 0.127791850347007 0.661817717804346 1.79710547516591 0.462317632634528 Q96PF1 TGM7 Q96PF1.T542.p_TGM7 Q96PF1_T542tT550t_2_2_542_550 Q96PF1 Q96PF1 Protein-glutamine gamma-glutamyltransferase Z HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29015.29015.5 8.82 3.19 7.191 4 2 2 0 1138.5868 5511.9676 T542t T550t M553m N554n Hydrogen 515 (R) VPDSTHPRGPIGLVVRFCAQALLHGGGtQKPFWRHtVRmnLDFGK (E) VPDS(0.0)T(0.0)HPRGPIGLVVRFCAQALLHGGGT(0.99)QKPFWRHT(0.99)VRM(1.0)N(1.0)LDFGK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T,m:Oxidized methionine,n:Deamidated TGM7 80624.4 1 1 6893.1 8.82 HUMAN 1 8.935 1.7926 ALLKENESPDVRRDK-p Q96FV9;S560-p ALLKENESPDVRRDK 0.729591644604445 0.00608899043357202 -0.075 0.573666666666667 2.59983503023703 31.9658783293679 -0.075 0.573666666666667 0.54956174894431 0.000635934178714978 -0.637892588446522 7.0411384580887 Q96FV9 THOC1 Q96FV9.S560.p_THOC1 Q96FV9_S560s _1_1_560_560 Q96FV9 Q96FV9|A0A087WWS1 THO complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17778.17778.5 24.23 24.23 5.68 3 1 1 0 933.2592 4582.2887 S560s TMT10 532 (K) ELPPPSEEIKTGEDEDEEDNDALLKENEsPDVRR (D) ELPPPS(0.0)EEIKT(0.0)GEDEDEEDNDALLKENES(0.99)PDVRR K:TMT10,s:Phosphorylated S THOC1 76406.7 6 2 2110.1 97.3 HUMAN 1 -2.5998 31.9659 ALLKMTISQQEFGRT-p Q5VWC4;S269-p ALLKMTISQQEFGRT 0.196950120649453 0.274018945734937 0.212333333333333 -0.120666666666667 13.7521713981377 7.40657550194868 0.212333333333333 -0.120666666666667 0.0421485715088273 0.181694779740928 2.64752844202721 -1.5315629541327 Q5VWC4 PSMD4 Q5VWC4.S269.p_PSMD4 Q5VWC4_S269s _1_1_269_269 Q5VWC4 Q5VWC4|P55036 26S proteasome non-ATPase regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14900.14900.2 13.24 13.24 2.279 2 1 1 0 753.355 1425.7358 S269s TMT10 266 (K) MTIsQQEFGR (T) MT(0.0)IS(0.99)QQEFGR s:Phosphorylated S PSMD4 41306.5 3 4 2823.1 69.24 HUMAN 1 13.7522 -7.4066 ALLKNLRSEEQKKKN-p Q86UE4;S111-p ALLKNLRSEEQKKKN 0.904021620863801 0.00738945399054107 -0.021 -0.546666666666667 0.861982359912986 30.4852894582651 -0.021 -0.546666666666667 0.819977176017719 0.000894274926317926 -0.238890599238653 -6.57050646613977 Q86UE4 MTDH Q86UE4.S111.p_MTDH Q86UE4_S111s _1_1_111_111 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5484.5484.3 9.8 9.8 99 1 1 1 0 514.6081 1461.8426 S111s TMT10 108 (K) NLRsEEQK (K) NLRS(1.0)EEQK K:TMT10,s:Phosphorylated S MTDH 63892.9 1 3 77.1 644.48 HUMAN 1 -0.862 -30.4853 ALLKRKLSEQEELKK-p A6NHR9;S1697-p ALLKRKLSEQEELKK 0.935222845456678 0.0142462376208421 -0.02 0.404666666666667 0.569693883198018 25.6033037739002 -0.02 0.404666666666667 0.877062639600837 0.00275213429755499 -0.16216070917699 5.1915314490156 A6NHR9 SMCHD1 A6NHR9.S1697.p_SMCHD1 A6NHR9_S1697s _1_1_1697_1697 A6NHR9 A6NHR9|A6NHR9-2|A6NHR9-3 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9026.9026.4 7.35 4.34 99 1 1 1 0 507.5433 1947.1842 S1697s TMT10 1694 (K) RKLsEQEELK (K) RKLS(1.0)EQEELK K:TMT10,s:Phosphorylated S SMCHD1 228081 1 6 2211.1 93.37 HUMAN 1 -0.5697 25.6033 ALLKRRRSDSTLFST-p Q9HC62;S32-p ALLKRRRSDSTLFST 0.848049388294984 0.362515173614571 0.0273333333333333 0.0993333333333334 1.3856480110222 5.84540953219645 0.0273333333333333 0.0993333333333333 0.726833940192734 0.260290936994254 0.368000098335957 1.25668342430289 Q9HC62 SENP2 Q9HC62.S32.p_SENP2 Q9HC62_S32s _1_1_32_32 Q9HC62 Q9HC62|F8WET6|F8WED7|F8WCX8|F8WED6 Sentrin-specific protease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12955.12955.5 21.99 21.99 1.245 6 1 1 0 572.0983 2776.4903 S32s Hydrogen 30 (R) RRsDSTLFSTVDTDEIPAKRPR (L) RRS(0.99)DS(0.0)T(0.0)LFS(0.0)T(0.0)VDT(0.0)DEIPAKRPR K:TMT10-Lys-Only,s:Phosphorylated S SENP2 68652.1 12 1 1030.1 186.01 HUMAN 1 1.3856 5.8454 ALLLLHLSPGAAGSS-p Q9UHF7-2;S616-p ALLLLHLSPGAAGSS 0.306735184126758 0.0077066739681077 -0.145 -0.447666666666667 9.60091299831251 30.1703708241603 -0.145 -0.447666666666667 0.109624771255078 0.000961530174222268 -1.91245086978338 -6.47378903429449 Q9UHF7 TRPS1 Q9UHF7.2.S616.p_TRPS1 Q9UHF7-2_S616s _1_1_616_616 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19585.19585.3 26.04 16.92 2.058 5 1 1 0 873.0898 2537.2914 S616s TMT10 603 (K) SNCSHCALLLLHLsPGAAGSSR (V) S(0.0)NCS(0.0)HCALLLLHLS(0.99)PGAAGS(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S TRPS1 145246 5 20 14.1 1150.14 HUMAN 1 -9.6009 -30.1704 ALLLLRNSPQPLRRA-p Q9UL54-2;S1002-p ALLLLRNSPQPLRRA 0.175973502111451 0.263672383248087 0.269333333333333 0.114 15.0027451235957 7.62749107941405 0.269333333333333 0.114 0.0316027945378259 0.172683519712645 2.87896603815966 1.56999187845539 Q9UL54 TAOK2 Q9UL54.2.S1002.p_TAOK2 Q9UL54-2_S1002s _1_1_1002_1002 Q9UL54-2 Q9UL54-2 Isoform 2 of Serine/threonine-protein kinase TAO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17726.17726.4 11.58 11.58 99 1 1 1 0 518.3043 1990.2235 S1002s TMT10 993 (R) GGALLLLRNsPQPLRR (A) GGALLLLRNS(1.0)PQPLRR s:Phosphorylated S TAOK2 119792.1 1 7 2238.1 92.22 HUMAN 1 15.0027 7.6275 ALLQAKASGKTSQVG-p E7ETY2;S365-p ALLQAKASGKTSQVG 0.332256356782789 0.019380298893346 -0.157 -1.29833333333333 8.9372056159351 23.528546406736 -0.157 -1.29833333333333 0.127726037302082 0.0044375714557905 -1.79749274017344 -4.67510628846977 E7ETY2 TCOF1 E7ETY2.S365.p_TCOF1 E7ETY2_S365s _1_1_365_365 E7ETY2 E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2|Q13428-5 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14574.14574.3 13.87 13.87 99 1 1 1 0 585.3577 1674.0881 S365s TMT10 358 (K) ALLQAKAsGK (T) ALLQAKAS(1.0)GK K:TMT10,s:Phosphorylated S TCOF1 152529.5 1 9 19.1 1034.65 HUMAN 1 -8.9372 -23.5285 ALLQLDGTPRVCRAA-p Q96MK2;T832-p ALLQLDGTPRVCRAA 0.164457111588682 0.104130684049716 0.243 0.181666666666667 15.7045522817099 12.9783873826744 0.243 0.181666666666667 0.0268871501095178 0.050368760277575 3.01166457263108 2.50580107033818 Q96MK2 FAM65C Q96MK2.T832.p_FAM65C Q96MK2_T832t _1_1_832_832 Q96MK2 Q96MK2 RIPOR family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29433.29433.2 11.05 11.05 99 1 1 1 0 825.4364 1569.895 T832t TMT10 823 (R) AWALLQLDGtPR (V) AWALLQLDGT(1.0)PR t:Phosphorylated T RIPOR3 106657.4 2 3 3747.1 43.99 HUMAN 1 15.7046 12.9784 ALLQSSASRKTQKKK-p Q9UQ80;S363-p ALLQSSASRKTQKKK 0.839563064744646 0.0132282127607495 0.041 -0.392666666666667 1.46716262178475 26.1448364377717 0.041 -0.392666666666667 0.713318910908037 0.00242949693902692 0.387277698569066 -5.33263910041724 Q9UQ80 PA2G4 Q9UQ80.S363.p_PA2G4 Q9UQ80_S363s _1_1_363_363 Q9UQ80 Q9UQ80|Q9UQ80-2 Proliferation-associated protein 2G4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10627.10627.2 9.81 9.81 1.223 3 1 1 0 621.3242 1161.6789 S363s TMT10 356 (K) ALLQSSAsR (K) ALLQS(0.0)S(0.0)AS(0.99)R s:Phosphorylated S PA2G4 44128.4 4 5 1457.1 140.36 HUMAN 1 1.4672 -26.1448 ALLTVEPSPQDKNKG-p O75509;S541-p ALLTVEPSPQDKNKG 0.0198229955984014 0.00141308796336804 -0.915333333333333 -1.023 39.7237640058536 46.1251840359934 -0.915333333333333 -1.023 0.000106567210884563 2.44051564691722e-05 -10.0307751136479 -13.2619293813611 O75509 TNFRSF21 O75509.S541.p_TNFRSF21 O75509_S541s _1_1_541_541 O75509 O75509 Tumor necrosis factor receptor superfamily member 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23046.23046.3 16.16 16.16 5.486 3 1 1 0 760.403 2199.2273 S541s TMT10 530 (K) LENSALLTVEPsPQDK (N) LENS(0.0)ALLT(0.0)VEPS(0.99)PQDK K:TMT10,s:Phosphorylated S TNFRSF21 73212.9 1 1 5801.1 16.16 HUMAN 1 -39.7238 -46.1252 ALMHKVPSEGAYDII-p A0A0C4DFY5;S428-p ALMHKVPSEGAYDII 0.623139860687409 0.387041098412105 -0.0816666666666667 0.12 3.81675779561284 5.48009153744019 -0.0816666666666667 0.12 0.41526394022384 0.283133231840192 -0.881936559043669 1.19109454603726 A0A0C4DFY5 GPRC5C A0A0C4DFY5.S428.p_GPRC5C A0A0C4DFY5_S428s _1_1_428_428 A0A0C4DFY5 A0A0C4DFY5|Q9NQ84-2|J9JIE0 G-protein-coupled receptor family C group 5 member C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26446.26446.3 14.7 14.7 6.115 2 1 1 0 580.3049 1658.9315 S428s TMT10 426 (K) VPsEGAYDIILPR (A) VPS(0.99)EGAY(0.0)DIILPR s:Phosphorylated S GPRC5C 53504 3 5 1470.1 139.57 HUMAN 1 -3.8168 5.4801 ALMTSHGSVEGRSPS-p Q9H8V3;S861-p ALMTSHGSVEGRSPS 0.3907864842099 0.00828953473445893 0.138666666666667 -0.479666666666667 7.54061549329546 29.5964187265885 0.138666666666667 -0.479666666666667 0.176172635233441 0.00109738274544566 1.55535194464104 -6.30045651187315 Q9H8V3 ECT2 Q9H8V3.S861.p_ECT2 Q9H8V3_S861s _1_1_861_861 Q9H8V3 Q9H8V3-3|Q9H8V3-4|Q9H8V3-2 Protein ECT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7353.7994.2 16.18 16.18 1.134 3 1 1 0 777.3752 1473.7681 S861s TMT10 854 (R) ALMTSHGsVEGR (S) ALMT(0.0)S(0.0)HGS(0.99)VEGR s:Phosphorylated S ECT2 104530 5 13 572.1 269.2 HUMAN 1 7.5406 -29.5964 ALNEANLSNLKAPLD-p Q06323;S55-p ALNEANLSNLKAPLD 0.97890490108253 0.192112500063213 -0.0156666666666667 -0.188 0.18289111127481 9.41904780938631 -0.0156666666666666 -0.188 0.958762168200894 0.114312893832611 -0.0541454184828614 -1.88021928943286 Q06323 PSME1 Q06323.S55.p_PSME1 Q06323_S55s _1_1_55_55 Q06323 Q06323-2|Q06323-3 Proteasome activator complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32862.32862.5 14.77 11.43 99 1 1 1 0 685.1865 3341.9288 S55s TMT10 46 (K) EPALNEANLsNLKAPLDIPVPDPVK (E) EPALNEANLS(1.0)NLKAPLDIPVPDPVK K:TMT10,s:Phosphorylated S PSME1 28893.7 1 2 4755.1 26.99 HUMAN 1 -0.1829 -9.419 ALNGDSDSEDMLNSE-p Q9NSI6-2;S2020-p ALNGDSDSEDMLNSE 0.53706412572523 0.659300010506872 0.0846666666666667 -0.044 4.99118412930446 2.47490343040911 0.0846666666666667 -0.044 0.316870337974163 0.565600333621401 1.10244229580373 -0.611503533993334 Q9NSI6 BRWD1 Q9NSI6.2.S2020.p_BRWD1 Q9NSI6-2_S2018sS2020s_2_2_2018_2020 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21311.21524.3 14.39 14.39 4.801 4 2 2 0 969.7679 2747.3558 S2018s S2020s TMT10 2009 (K) VLSQALNGDsDsEDMLNSEHK (H) VLS(0.0)QALNGDS(0.99)DS(0.99)EDMLNS(0.0)EHK K:TMT10,s:Phosphorylated S BRWD1 259915.1 2 33 208.1 444.81 HUMAN 1 4.9912 -2.4749 ALNTTATYAEPYRPI-p A0A0D9SF60;Y477-p ALNTTATYAEPYRPI 0.187254795627764 0.779606182581259 0.212 -0.0466666666666666 14.2890126797081 1.49667448732075 0.212 -0.0466666666666666 0.0372476374998807 0.708488085606016 2.74613779803941 -0.39416646681807 A0A0D9SF60 NotFound A0A0D9SF60.Y477.p_NotFound A0A0D9SF60_Y477y _1_1_477_477 A0A0D9SF60 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.19551.19606.3 25.39 18.09 1.365 7 1 1 0 943.4593 2748.3943 Y477y TMT10 467 (R) NNYALNTTATyAEPYRPIQYR (V) NNY(0.0)ALNT(0.0)T(0.0)AT(0.0)Y(0.99)AEPY(0.0)RPIQY(0.0)R y:Phosphorylated Y PKP4 134765 3 2 23.1 71.28 HUMAN 1 14.289 -1.4967 ALPAIPISPPPVSAV-p Q6P4R8;S736-p ALPAIPISPPPVSAV 0.977858515477068 0.288249828296497 -0.00433333333333334 0.116333333333333 0.192058493928415 7.12778612820831 -0.00433333333333334 0.116333333333333 0.956740482457236 0.193740933150507 -0.0568032037262328 1.48294625408438 Q6P4R8 NFRKB Q6P4R8.S736.p_NFRKB Q6P4R8_S736s _1_1_736_736 Q6P4R8 Q6P4R8|Q6P4R8-3|Q6P4R8-2 Nuclear factor related to kappa-B-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35085.35292.5 25.96 24.58 1.605 15 1 1 0 1087.3689 5352.8363 S736s TMT10 697 (K) VLSSGPSEQSQMSLSDSSMPPTPVTPVTPTTPALPAIPIsPPPVSAVNK (S) VLS(0.0)S(0.0)GPS(0.0)EQS(0.0)QMS(0.0)LS(0.0)DS(0.0)S(0.0)MPPT(0.0)PVT(0.0)PVT(0.0)PT(0.0)T(0.0)PALPAIPIS(0.99)PPPVS(0.0)AVNK K:TMT10,s:Phosphorylated S NFRKB 139455.1 6 6 791.1 224.91 HUMAN 1 -0.1921 7.1278 ALPALLDSDEERMIT-p Q8NBN3;S540-p ALPALLDSDEERMIT 0.402969818461612 0.175735829517238 0.116 0.135666666666667 7.28827174280483 9.92985576268194 0.116 0.135666666666667 0.186712255682841 0.101628244495049 1.51138527075892 1.96873668292242 Q8NBN3 TMEM87A Q8NBN3.S540.p_TMEM87A Q8NBN3_S540s _1_1_540_540 Q8NBN3 Q8NBN3|Q8NBN3-3 Transmembrane protein 87A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.34417.35032.4 27.75 23.66 5.533 4 1 1 0 1027.7573 4028.0388 S540s TMT10 513 (K) AQEDDLKWVEENVPSSVTDVALPALLDsDEER (M) AQEDDLKWVEENVPS(0.0)S(0.0)VT(0.0)DVALPALLDS(0.99)DEER K:TMT10,s:Phosphorylated S TMEM87A 63828.2 39 2 1579.1 130.06 HUMAN 1 7.2883 9.9299 ALPAPRGSGTASDDE-p Q7Z6Z7;S1903-p ALPAPRGSGTASDDE 0.949536142329428 0.627546681728879 -0.0113333333333333 0.06 0.44506263830971 2.75230079312459 -0.0113333333333333 0.06 0.902596689221599 0.530603268246104 -0.128231682987356 0.669546925321584 Q7Z6Z7 HUWE1 Q7Z6Z7.S1903.p_HUWE1 Q7Z6Z7_S1903s _1_1_1903_1903 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21027.21027.3 15.68 15.68 1.149 3 1 1 0 842.4132 2445.2571 S1903s TMT10 1895 (R) IALPAPRGsGTASDDEFENLR (I) IALPAPRGS(0.99)GT(0.0)AS(0.0)DDEFENLR s:Phosphorylated S HUWE1 485818.9 2 16 11.1 1210.45 HUMAN 1 -0.4451 2.7523 ALPCVAESPTVHVEV-p Q15645;S18-p ALPCVAESPTVHVEV 0.444636977587231 0.763057248401207 0.133666666666667 0.0306666666666667 6.48570349903421 1.62344989108309 0.133666666666667 0.0306666666666667 0.224610290786108 0.688105471057116 1.37065260355386 0.423651625016935 Q15645 TRIP13 Q15645.S18.p_TRIP13 Q15645_S18s _1_1_18_18 Q15645 Q15645|Q15645-2 Pachytene checkpoint protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13370.13370.3 23.66 23.66 3.38 2 1 1 0 822.7444 2386.2499 S18s TMT10 10 (K) QALPCVAEsPTVHVEVHQR (G) QALPCVAES(0.99)PT(0.0)VHVEVHQR C:Carbamidomethylation,s:Phosphorylated S TRIP13 48892.2 4 1 4244.1 34.84 HUMAN 1 6.4857 1.6234 ALPDSMVSVKRKAEN-p Q14596;S625-p ALPDSMVSVKRKAEN 0.799050924192311 0.0809500095577755 0.0373333333333333 -0.442 1.87713395719315 14.4786896186966 0.040299065484253 -0.442 0.649062628626752 0.0356558700386822 0.481417214434206 -2.77950178396237 Q14596 NBR1 Q14596.S625.p_NBR1 Q14596_S625s _1_1_625_625 Q14596 Q14596|Q14596-2|B7Z5R6 Next to BRCA1 gene 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20921.20921.3 10.53 10.53 3.818 2 1 1 0 528.9546 1504.8809 S625s TMT10 618 (K) ALPDSMVsVK (R) ALPDS(0.0)MVS(0.99)VK K:TMT10,s:Phosphorylated S NBR1 108552.4 1 6 3628.1 46.61 HUMAN 1 1.8771 -14.4787 ALPEQTASEEETPPP-p Q9UKV3;S410-p ALPEQTASEEETPPP 0.955888401918538 0.00967750202689351 0.00833333333333332 0.411333333333333 0.383151373833781 28.3700428819619 0.00833333333333332 0.411333333333333 0.915555893615217 0.00145544470954221 0.111081143354267 5.94237977452122 Q9UKV3 ACIN1 Q9UKV3.S410.p_ACIN1 Q9UKV3_S410sT414t_2_2_410_414 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.32001.32191.3 20.61 20.36 1.591 5 2 2 0 1013.8476 2879.6018 S410s T414t TMT10 399 (K) ASLVALPEQTAsEEEtPPPLLTK (E) AS(0.0)LVALPEQT(0.0)AS(0.99)EEET(0.99)PPPLLT(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T ACIN1 152258.2 11 45 32.2 899.18 HUMAN 1 0.3832 28.37 ALPNGPPSPRSGRDP-p Q15642;S351-p ALPNGPPSPRSGRDP 0.955045601152663 0.798621162967567 -0.0103333333333333 0.0346666666666667 0.392268354488945 1.36604362976668 -0.0103333333333333 0.0346666666666667 0.913635917547425 0.730122340008802 -0.113619509306896 0.363295911996416 Q15642 TRIP10 Q15642.S351.p_TRIP10 Q15642_S351s _1_1_351_351 Q15642 Q15642 Cdc42-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20417.20417.4 25.21 21.58 4.566 3 1 1 0 809.4534 3154.8253 S351s TMT10 327 (K) NKPRPPPLSPLGGPVPSALPNGPPsPR (S) NKPRPPPLS(0.0)PLGGPVPS(0.0)ALPNGPPS(0.99)PR K:TMT10,s:Phosphorylated S TRIP10 68579.3 6 2 2083.1 98.23 HUMAN 1 -0.3923 1.366 ALPPKIGTPTRPCPL-p P42566;T777-p ALPPKIGTPTRPCPL 0.148057833368569 0.382559884498192 -0.369666666666667 0.137333333333333 16.8272862468792 5.54404925526844 -0.369666666666667 0.137333333333333 0.0207621046293308 0.278994135526327 -3.22869429942538 1.2026238973982 P42566 EPS15 P42566.T777.p_EPS15 P42566_T777t _1_1_777_777 P42566 P42566|B1AUU8|P42566-2 Epidermal growth factor receptor substrate 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14381.14587.3 15.31 9.8 1.461 2 1 1 0 677.0413 1949.1407 T777t TMT10 775 (K) IGtPTRPCPLPPGK (R) IGT(0.99)PT(0.0)RPCPLPPGK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T EPS15 99281.5 6 12 342.1 353.17 HUMAN 1 -16.8273 5.544 ALPPPPASPGSRTSP-p Q96PU5;S297-p ALPPPPASPGSRTSP 0.502476748524749 0.650692337768217 -0.111 -0.0436666666666667 5.51334627015248 2.54780709783034 -0.111 -0.0436666666666667 0.280973507510019 0.556185023322711 -1.19735532131225 -0.626888311253803 Q96PU5 NEDD4L Q96PU5.S297.p_NEDD4L Q96PU5_S297s _1_1_297_297 Q96PU5 A0A1B0GVY1|Q96PU5|Q96PU5-7|Q96PU5-5|Q96PU5-6|Q96PU5-2|Q96PU5-3|Q96PU5-4|Q96PU5-9 E3 ubiquitin-protein ligase NEDD4-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36635.36635.4 25.39 20.44 1.429 7 1 1 0 1321.6344 5203.5433 S297s TMT10 254 (R) HISEDLEPEPSEGGDVPEPWETISEEVNIAGDSLGLALPPPPAsPGSR (T) HIS(0.0)EDLEPEPS(0.0)EGGDVPEPWET(0.0)IS(0.0)EEVNIAGDS(0.0)LGLALPPPPAS(0.99)PGS(0.0)R s:Phosphorylated S NEDD4L 112272 3 3 495.1 293.21 HUMAN 1 -5.5133 -2.5478 ALPQVRLYGPTNFAP-p B0QZ18;Y391-p ALPQVRLYGPTNFAP 0.796313559448739 0.190013173716585 -0.0456666666666667 0.134333333333333 1.90964865671511 9.48350511258214 -0.0456666666666667 0.134333333333333 0.644221380775732 0.112628808241929 -0.488698798515614 1.8913788351328 B0QZ18 CPNE1 B0QZ18.Y391.p_CPNE1 B0QZ18_Y391y _1_1_391_391 B0QZ18 B0QZ18|Q99829|A6PVH9|E7ENH5 Copine-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.29292.29338.3 17.67 17.67 2.04 2 1 1 0 698.0377 2012.1279 Y391y TMT10 390 (R) LyGPTNFAPIINHVAR (F) LY(0.99)GPT(0.0)NFAPIINHVAR y:Phosphorylated Y CPNE1 60344.2 2 1 200.1 17.67 HUMAN 1 -1.9096 9.4835 ALPSESVSSLTDLKP-p Q9BZQ8;S581-p ALPSESVSSLTDLKP 0.710606156957589 0.362634117704378 0.0523333333333333 0.09 2.79009414147986 5.84265539991147 0.0523333333333333 0.0900000000000001 0.526005864102802 0.260456056068707 0.677445767075503 1.25619124646859 Q9BZQ8 FAM129A Q9BZQ8.S581.p_FAM129A Q9BZQ8_S581s_1_1_581_581 Q9BZQ8 Q9BZQ8 Protein Niban HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23031.23031.5 8.62 6.92 8.623 8 1 1 0 834.2143 4069.0701 N567n N572n M573m S581s TMT10 566 (K) HnLFEDnmALPSESVsSLTDLKPPTGSNQASPAR (R) HN(0.99)LFEDN(0.99)M(1.0)ALPS(0.0)ES(0.0)VS(0.99)S(0.0)LT(0.0)DLKPPT(0.0)GS(0.0)N(0.0)QAS(0.0)PAR K:TMT10,n:Deamidated,m:Oxidized methionine,s:Phosphorylated S FAM129A 104102.7 18 1 641.1 254.96 HUMAN 1 2.7901 5.8427 ALPSQRRSPPEEPPD-p Q9Y6K9-2;S455-p ALPSQRRSPPEEPPD 0.473050480833177 0.627999732199763 0.107 0.0616666666666667 5.98943976326983 2.74782229905518 0.107 0.0616666666666667 0.251800172720456 0.531150714586324 1.28268212529335 0.668620203614626 Q9Y6K9 IKBKG Q9Y6K9.2.S455.p_IKBKG Q9Y6K9-2_S455s _1_1_455_455 Q9Y6K9-2 Q9Y6K9-2|A0A087X1B1|A0A087WUW6|A0A087X0G7|Q9Y6K9-3 Isoform 2 of NF-kappa-B essential modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12975.12975.3 20.02 13.36 99 1 1 1 0 752.0218 2174.0775 S455s TMT10 454 (R) RsPPEEPPDFCCPK (C) RS(1.0)PPEEPPDFCCPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S IKBKG 56584.6 6 2 2126.1 96.64 HUMAN 1 5.9894 2.7478 ALPTGYDSEEEEESR-p P25440;S633-p ALPTGYDSEEEEESR 0.370933678088192 0.2757728594683 -0.137 -0.126333333333333 7.98572103871055 7.37229267678909 -0.137 -0.126333333333333 0.159011266297626 0.183134738358295 -1.63268348404475 -1.52559228100511 P25440 BRD2 P25440.S633.p_BRD2 P25440_S633s _1_1_633_633 P25440 A0A0G2JK44|P25440|P25440-3|P25440-4 Bromodomain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15494.15494.4 17.89 14.64 2.182 7 1 1 0 906.4238 3542.6997 S633s TMT10 622 (K) TAPPALPTGYDsEEEEESRPMSYDEKR (Q) T(0.0)APPALPT(0.0)GY(0.0)DS(0.99)EEEEES(0.0)RPMS(0.0)Y(0.0)DEKR K:TMT10,s:Phosphorylated S BRD2 88344.5 13 4 1414.1 145 HUMAN 1 -7.9857 -7.3723 ALPVLVDSDEEIMTR-p Q96K49;S534-p ALPVLVDSDEEIMTR 0.287614984375167 0.140620659695676 -0.202333333333333 0.163333333333333 10.2052008543712 11.2263585025212 -0.202333333333333 0.163333333333333 0.0953849627775501 0.0753987506562523 -2.01738448924175 2.19480076616548 Q96K49 TMEM87B Q96K49.S534.p_TMEM87B Q96K49_S534s _1_1_534_534 Q96K49 Q96K49|Q96K49-2 Transmembrane protein 87B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36729.37113.3 27.94 24.14 4.541 5 1 1 0 1167.5629 3420.7082 S534s TMT10 514 (K) WVEENIPSSFTDVALPVLVDsDEEIMTR (S) WVEENIPS(0.0)S(0.0)FT(0.0)DVALPVLVDS(0.99)DEEIMT(0.0)R s:Phosphorylated S TMEM87B 64219.7 21 4 2468.1 82.08 HUMAN 1 -10.2052 11.2264 ALQARQASPAWK___-p Q16626;S181-p ALQARQASPAWK___ 0.0387693955698889 0.0012355221677667 -0.584333333333333 -1.04966666666667 32.0444856394763 47.6644092197994 -0.584333333333333 -1.04966666666667 0.000624527312346997 1.7122180775992e-05 -7.07909954941295 -14.180818355655 Q16626 MEA1 Q16626.S181.p_MEA1 Q16626_S181s _1_1_181_181 Q16626 Q16626 Male-enhanced antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11791.11791.2 10.13 6.87 99 1 1 1 0 663.3543 1245.7356 S181s TMT10 179 (R) QAsPAWK (-) QAS(1.0)PAWK K:TMT10,s:Phosphorylated S MEA1 19904.3 1 3 4201.1 35.54 HUMAN 1 -32.0445 -47.6644 ALQCAILSPAFKVRE-p P34932;S384-p ALQCAILSPAFKVRE 0.885311858337516 0.668325397808243 0.0253333333333333 -0.071 1.04481830689305 2.39588603742333 0.0253333333333333 -0.071 0.786173081099002 0.575985295401844 0.285083150480222 -0.594718150339493 P34932 HSPA4 P34932.S384.p_HSPA4 P34932_S384s _1_1_384_384 P34932 Q92598-4|P34932 Heat shock 70 kDa protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25832.25832.3 16.17 16.17 99 1 1 1 0 692.0251 1994.0967 S384s TMT10 375 (R) GCALQCAILsPAFK (V) GCALQCAILS(1.0)PAFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HSPA4 95185.1 1 8 549.1 274.67 HUMAN 1 1.0448 -2.3959 ALQDTDDSDDDPVLI-p Q58WW2-3;S734-p ALQDTDDSDDDPVLI 0.192149955549525 0.473690328055589 0.253333333333333 0.131666666666667 13.9809277244233 4.32541123356392 0.253333333333333 0.131666666666667 0.0399859324110841 0.369367667267783 2.68941745020482 0.978667440460225 Q58WW2 DCAF6 Q58WW2.3.S734.p_DCAF6 Q58WW2-3_T731tS734s_2_2_731_734 Q58WW2-3 Q58WW2-3|Q58WW2-4|Q58WW2-2 Isoform 3 of DDB1- and CUL4-associated factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24735.24735.2 16.61 16.61 5.503 3 2 2 0 1302.5544 2444.1626 T731t S734s TMT10 725 (R) DSALQDtDDsDDDPVLIPGAR (Y) DS(0.0)ALQDT(0.99)DDS(0.99)DDDPVLIPGAR t:Phosphorylated T,s:Phosphorylated S DCAF6 107567.4 4 5 2596.1 77.25 HUMAN 1 13.9809 4.3254 ALQPDAPSPGPSDHP-p P07902;S108-p ALQPDAPSPGPSDHP 0.0948633510902073 0.101616479764582 0.447333333333333 0.211333333333333 21.7295217824355 13.1186691785362 0.447333333333333 0.211333333333333 0.00671502790487432 0.0487677907796897 4.26035038968067 2.53106874136429 P07902 GALT P07902.S108.p_GALT P07902_S108s _1_1_108_108 P07902 P07902 Galactose-1-phosphate uridylyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32818.32818.5 16.55 16.55 1.527 5 1 1 0 977.2634 4802.3415 S108s TMT10 81 (R) ANGEVNPQYDSTFLFDNDFPALQPDAPsPGPSDHPLFQAK (S) ANGEVNPQY(0.0)DS(0.0)T(0.0)FLFDNDFPALQPDAPS(0.99)PGPS(0.0)DHPLFQAK K:TMT10,s:Phosphorylated S GALT 43647.6 1 1 5753.1 16.55 HUMAN 1 21.7295 13.1187 ALQQHRPSPELTLSQ-p Q96FI4;S207-p ALQQHRPSPELTLSQ 0.281389310516278 0.441742451972874 0.172666666666667 0.089 10.4136097538422 4.72546276833547 0.172666666666667 0.089 0.090915728828959 0.33686331890428 2.05366925732294 1.05329568105508 Q96FI4 NEIL1 Q96FI4.S207.p_NEIL1 Q96FI4_S207s _1_1_207_207 Q96FI4 Q96FI4 Endonuclease 8-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21798.21798.4 16.64 11.73 3.58 4 1 1 0 700.6339 2719.5507 S207s TMT10 196 (R) SVLEALQQHRPsPELTLSQK (I) S(0.0)VLEALQQHRPS(0.99)PELT(0.0)LS(0.0)QK K:TMT10,s:Phosphorylated S NEIL1 44139.7 2 1 5214.1 21.72 HUMAN 1 10.4136 4.7255 ALQRNSVSPGLPQRP-p Q14814;S192-p ALQRNSVSPGLPQRP 0.579965732613118 0.0421227895274775 -0.137 0.303 4.352119646813 18.4322062826913 -0.137 0.303 0.367103085969935 0.0143476036787115 -0.983867112259478 3.54727740322714 Q14814 MEF2D Q14814.S192.p_MEF2D Q14814_S192s _1_1_192_192 Q14814 Q14814|Q14814-2 Myocyte-specific enhancer factor 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21344.21344.4 21.72 21.72 1.116 7 1 1 0 1066.515 4183.061 S192s TMT10 189 (R) NSVsPGLPQRPASAGAMLGGDLNSANGACPSPVGNGYVSAR (A) NS(0.0)VS(0.99)PGLPQRPAS(0.0)AGAMLGGDLNS(0.0)ANGACPS(0.0)PVGNGY(0.0)VS(0.0)AR C:Carbamidomethylation,s:Phosphorylated S MEF2D 56165 1 4 1187.1 168.72 HUMAN 1 -4.3521 18.4322 ALQRRRRTPEPLSRT-p Q8IV36;T584-p ALQRRRRTPEPLSRT 0.961261717654481 0.197312098860737 0.0116666666666667 -0.241333333333333 0.329298540530181 9.27400482755998 0.0116666666666667 -0.241333333333333 0.92697953425302 0.118195112197821 0.0959949663610842 -1.85511567576765 Q8IV36 HID1 Q8IV36.T584.p_HID1 Q8IV36_T584t _1_1_584_584 Q8IV36 Q8IV36|Q8IV36-2|Q8IV36-3 Protein HID1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3419.3419.3 13.17 4.78 13.172 2 1 1 0 397.8717 1111.6331 T584t Hydrogen 582 (R) RRtPEPLSR (T) RRT(0.99)PEPLS(0.0)R t:Phosphorylated T HID1 89370.5 5 3 589.1 264.44 HUMAN 1 0.3293 -9.274 ALQYGSESEEDAALA-p Q86U86;S355-p ALQYGSESEEDAALA 0.929264170031949 0.17481165115692 -0.017 0.273 0.632713319801827 9.9615148953953 -0.017 0.273 0.864427685894291 0.100890090234474 -0.179028622188082 1.97423013740429 Q86U86 PBRM1 Q86U86.S355.p_PBRM1 Q86U86_S353sS355s_2_2_353_355 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-9|Q86U86-3|Q86U86-7|Q86U86-4|Q86U86-5|Q86U86-6 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.33627.34250.3 23.39 23.39 1.205 5 2 2 0 953.1016 2697.3603 S353s S355s TMT10 342 (R) LSAITMALQYGsEsEEDAALAAAR (Y) LS(0.0)AIT(0.0)MALQY(0.0)GS(0.99)ES(0.99)EEDAALAAAR s:Phosphorylated S PBRM1 194199.5 8 22 194.1 462.54 HUMAN 1 -0.6327 9.9615 ALRGLGLSPDLIVCR-p Q9NRF8;S210-p ALRGLGLSPDLIVCR 0.50556949003824 0.946222530358243 0.103333333333333 0.00766666666666667 5.46900537576151 0.342848393269826 0.103333333333333 0.00766666666666668 0.283856904505908 0.924091893958004 1.18935384440345 0.0997966165604883 Q9NRF8 CTPS2 Q9NRF8.S210.p_CTPS2 Q9NRF8_S210s _1_1_210_210 Q9NRF8 Q9NRF8 CTP synthase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27031.27031.3 11.92 11.92 99 1 1 1 0 536.9512 1528.8719 S210s TMT10 206 (R) GLGLsPDLIVCR (S) GLGLS(1.0)PDLIVCR C:Carbamidomethylation,s:Phosphorylated S CTPS2 66361 2 7 2509.2 80.59 HUMAN 1 5.469 0.3428 ALRKIQESYGDVYGI-p P20020;S52-p ALRKIQESYGDVYGI 0.697895964859773 0.589903174540975 0.063 -0.0546666666666667 2.93613882651293 3.09968527966935 0.063 -0.0546666666666667 0.508611431780712 0.489814313472951 0.707411257379735 -0.740481855983836 P20020 ATP2B1 P20020.S52.p_ATP2B1 P20020_S52s _1_1_52_52 P20020 P20020|P20020-4|P20020-3|P20020-6|P20020-2|P20020-5 Plasma membrane calcium-transporting ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21331.21331.3 13.08 10.97 3.371 4 1 1 0 724.356 2091.0833 S52s TMT10 49 (K) IQEsYGDVYGICTK (L) IQES(0.99)Y(0.0)GDVY(0.0)GICT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATP2B1 139722.6 1 2 921.1 200.23 HUMAN 1 2.9361 -3.0997 ALRNRSNTPILVDGK-p P06744-2;T148-p ALRNRSNTPILVDGK 0.801907960256169 0.456970293199546 -0.0433333333333333 0.0883333333333333 1.84564452258626 4.53488238287904 -0.0433333333333333 0.0883333333333334 0.65378589652543 0.351974954702118 -0.474340924001155 1.01789861751402 P06744 GPI P06744.2.T148.p_GPI P06744-2_T148t _1_1_148_148 P06744-2 P06744-2|K7EQ48 Isoform 2 of Glucose-6-phosphate isomerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21531.21531.3 20.26 20.26 1.312 2 1 1 0 832.1058 2414.3365 T148t Hydrogen 146 (R) SNtPILVDGKDVMPEVNK (V) S(0.0)NT(0.99)PILVDGKDVMPEVNK K:TMT10-Lys-Only,t:Phosphorylated T GPI 64608.7 9 2 2374.1 86.23 HUMAN 1 -1.8456 4.5349 ALRPPQVTPPRKDAA-p Q9H6K5;T286-p ALRPPQVTPPRKDAA 0.206707718755869 0.00480740028593783 -0.193 -0.569666666666667 13.2349414350028 33.8561582676575 -0.193 -0.569666666666667 0.0474794693547102 0.00041151358158889 -2.55348956507673 -7.68246987913623 Q9H6K5 PRR36 Q9H6K5.T286.p_PRR36 Q9H6K5_T286t _1_1_286_286 Q9H6K5 Q9H6K5|Q9H6K5-2 Proline-rich protein 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16192.16192.4 10.52 10.52 99 1 1 1 0 549.8257 2116.3119 T286t TMT10 276 (K) GLQALRPPQVtPPRK (D) GLQALRPPQVT(1.0)PPRK K:TMT10,t:Phosphorylated T PRR36 133030.9 2 4 1580.1 130 HUMAN 1 -13.2349 -33.8562 ALRPRRGSHPKAELD-p Q5FWE3;S854-p ALRPRRGSHPKAELD 0.895249079123384 0.526620090466497 0.02 0.061 0.941224796407629 3.74311487079008 0.02 0.061 0.805151340561112 0.422365574242388 0.259069603588624 0.86755571362252 Q5FWE3 PRRT3 Q5FWE3.S854.p_PRRT3 Q5FWE3_S854s _1_1_854_854 Q5FWE3 Q5FWE3|Q5FWE3-2 Proline-rich transmembrane protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11771.11771.3 8.5 8.5 8.5 3 1 1 0 816.4318 2367.3145 S854s TMT10 852 (R) RGsHPKAELDDAGSSLLR (G) RGS(0.99)HPKAELDDAGS(0.0)S(0.0)LLR K:TMT10,s:Phosphorylated S PRRT3 102765.9 2 5 931.1 199.28 HUMAN 1 0.9412 3.7431 ALSEDKCSPKKVKLG-p Q5T7B8;S584-p ALSEDKCSPKKVKLG 0.189699140195513 0.00112568182952083 -0.208333333333333 -1.08133333333333 14.1261711339864 49.1652843683752 -0.208333333333333 -1.08273127756306 0.0386707759577987 1.21191333222707e-05 -2.71611325348127 -15.1351218695375 Q5T7B8 KIF24 Q5T7B8.S584.p_KIF24 Q5T7B8_S584s _1_1_584_584 Q5T7B8 Q5T7B8|Q5T7B8-2|Q5T7B8-4 Kinesin-like protein KIF24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9439.9439.4 13.65 8.14 2.62 4 1 1 0 657.6006 2547.4168 S584s TMT10 570 (K) RIQSSPGALSEDKCsPK (K) RIQS(0.0)S(0.0)PGALS(0.0)EDKCS(0.99)PK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S KIF24 153269.8 4 1 1608.1 127.82 HUMAN 1 -14.1262 -49.1653 ALSEVASSLQSSAPK-p Q86TV6-2;S695-p ALSEVASSLQSSAPK 0.252409750747624 0.0344283897165834 0.188 0.272333333333333 11.4045900070246 19.7137133925301 0.188 0.272333333333333 0.0723670716734675 0.0106814118497286 2.22714813873774 3.81427364244756 Q86TV6 TTC7B Q86TV6.2.S695.p_TTC7B Q86TV6-2_S694sS695s_2_2_694_695 Q86TV6-2 Q86TV6-2 Isoform 2 of Tetratricopeptide repeat protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25160.25160.3 12.04 12.04 1.306 5 2 2 0 817.0763 2289.2702 S694s S695s TMT10 685 (R) VEQALSEVAssLQSSAPK (Q) VEQALS(0.0)EVAS(0.99)S(0.99)LQS(0.0)S(0.0)APK K:TMT10,s:Phosphorylated S TTC7B 96901.3 3 7 2074.1 99.01 HUMAN 1 11.4046 19.7137 ALSIESLSPTDSSNG-p Q9Y3M8;S416-p ALSIESLSPTDSSNG 0.887353114485877 0.238431767230691 0.0206666666666667 -0.118 1.01205419970279 8.20187179380306 0.0206666666666667 -0.118 0.792126568396925 0.151290904946787 0.276899369313491 -1.66961961961867 Q9Y3M8 STARD13 Q9Y3M8.S416.p_STARD13 Q9Y3M8_S416s _1_1_416_416 Q9Y3M8 Q9Y3M8|Q9Y3M8-2|Q9Y3M8-4|Q9Y3M8-3|Q9Y3M8-5 StAR-related lipid transfer protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24165.24165.3 16.52 16.52 1.749 6 1 1 0 781.3793 2262.1564 S416s TMT10 409 (K) ALSIESLsPTDSSNGVNWR (T) ALS(0.0)IES(0.0)LS(0.99)PT(0.0)DS(0.0)S(0.0)NGVNWR s:Phosphorylated S STARD13 126277.4 1 7 564.1 271.22 HUMAN 1 1.0121 -8.2019 ALSKVDASGELEDVE-p Q9NW68-7;S435-p ALSKVDASGELEDVE 0.263859982002435 0.627869013466998 0.194666666666667 -0.0803333333333333 10.9788197598572 2.74925626980532 0.194666666666667 -0.0803333333333333 0.079821158004232 0.530975366086369 2.1523991511815 -0.668916966585191 Q9NW68 BSDC1 Q9NW68.7.S435.p_BSDC1 Q9NW68-7_S435s _1_1_435_435 Q9NW68-7 Q9NW68-7|Q9NW68-8|Q9NW68-9 Isoform 7 of BSD domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33410.33410.2 8.22 8.22 99 1 1 1 0 1108.96 2136.9447 S435s TMT10 432 (K) VDAsGELEDVEWEDWE (-) VDAS(1.0)GELEDVEWEDWE s:Phosphorylated S BSDC1 49387.9 1 8 1426.1 143.74 HUMAN 1 10.9788 -2.7493 ALSQNQQSSGAAGPT-p O95232;S115-p ALSQNQQSSGAAGPT 0.435048063020442 0.00203690866710184 -0.23 0.995333333333333 6.65511241163309 41.9373231906937 -0.23 0.995333333333334 0.216017412067648 6.40129262785244e-05 -1.40049686777581 11.0380166558534 O95232 LUC7L3 O95232.S115.p_LUC7L3 O95232_S115s_1_1_115_115 O95232 J3KPP4|O95232 Luc7-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13335.13335.4 12.68 12.68 1.195 4 1 1 0 746.6431 2902.5837 N112n S115s TMT10 107 (R) LALSQnQQsSGAAGPTGKNEEK (I) LALS(0.0)QN(0.99)QQS(0.99)S(0.0)GAAGPT(0.0)GKN(0.0)EEK K:TMT10,n:Deamidated,s:Phosphorylated S LUC7L3 51864.7 1 4 1151.1 172.09 HUMAN 1 -6.6551 41.9373 ALSVRNLSPYVSNEL-p P23246;S379-p ALSVRNLSPYVSNEL 0.453059514947596 0.847299644324885 -0.130333333333333 0.0473333333333333 6.34517748882421 1.01076273578323 -0.130333333333333 0.0473333333333333 0.231996937039993 0.792362158542781 -1.34582930755409 0.276548693419028 P23246 SFPQ P23246.S379.p_SFPQ P23246_S379s_1_1_379_379 P23246 P23246|P23246-2 Splicing factor, proline- and glutamine-rich HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37596.37596.3 19.84 19.84 1.841 4 1 1 0 983.8168 2868.4617 S379s N384n TMT10 377 (R) NLsPYVSnELLEEAFSQFGPIER (A) N(0.0)LS(0.99)PY(0.0)VS(0.0)N(0.99)ELLEEAFS(0.0)QFGPIER s:Phosphorylated S,n:Deamidated SFPQ 76262.2 1 6 1659.1 123.09 HUMAN 1 -6.3452 1.0108 ALSYKPVSPRRPWSP-p Q5T1R4;S1964-p ALSYKPVSPRRPWSP 0.525819780346243 0.116650643720984 0.0913333333333333 0.214333333333333 5.16344961071322 12.3077614539873 0.0913333333333333 0.214333333333333 0.304547500109827 0.05877922486053 1.13392847203787 2.38581833890523 Q5T1R4 HIVEP3 Q5T1R4.S1964.p_HIVEP3 Q5T1R4_S1964s _1_1_1964_1964 Q5T1R4 Q5T1R4 Transcription factor HIVEP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12754.12754.3 13.21 8.57 5.078 5 1 1 0 672.6902 1936.0904 S1964s TMT10 1953 (K) DTGSALSYKPVsPR (R) DT(0.0)GS(0.0)ALS(0.0)Y(0.0)KPVS(0.99)PR K:TMT10,s:Phosphorylated S HIVEP3 261285.6 1 34 465.1 303.46 HUMAN 1 5.1634 12.3078 ALTVKNLSPVVSNEL-p Q8WXF1;S164-p ALTVKNLSPVVSNEL 0.664425582516381 0.62217190871681 0.0583333333333333 0.0483333333333334 3.32226532800377 2.80121554321193 0.0583333333333333 0.0483333333333334 0.465343301999089 0.524660592880632 0.785141280524237 0.679647579829681 Q8WXF1 PSPC1 Q8WXF1.S164.p_PSPC1 Q8WXF1_S164s _1_1_164_164 Q8WXF1 Q8WXF1|Q8WXF1-2 Paraspeckle component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36864.36864.3 23.46 23.46 5.17 3 1 1 0 1024.2012 2990.6239 S164s TMT10 162 (K) NLsPVVSNELLEQAFSQFGPVEK (A) NLS(0.99)PVVS(0.0)NELLEQAFS(0.0)QFGPVEK K:TMT10,s:Phosphorylated S PSPC1 58856.7 3 1 1850.1 111.09 HUMAN 1 3.3223 2.8012 ALVIDNGSGMCKAGF-p P63261;S14-p ALVIDNGSGMCKAGF 0.429948637699786 0.567071736729328 0.105666666666667 0.0563333333333334 6.75049899813966 3.32300913736101 0.105666666666667 0.0563333333333334 0.211324621692322 0.465263610205115 1.41726474302902 0.785171870521899 P63261 ACTG1 P63261.S14.p_ACTG1 P63261_S14s _1_1_14_14 P63261 P63261|J3KT65 Actin, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34068.34068.2 14.38 14.38 99 1 1 1 0 1093.9983 2107.0249 S14s Acetyl 2 (M) EEEIAALVIDNGsGMCK (A) EEEIAALVIDNGS(1.0)GMCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ACTG1 42134.4 4 8 1233.1 163.71 HUMAN 1 6.7505 3.323 ALVKASRSPLVTGSP-p Q10571;S1075-p ALVKASRSPLVTGSP 0.693749671542643 0.0220193834026431 0.0926666666666667 0.680333333333333 2.97916151026872 22.6450982064189 0.0926666666666667 0.680333333333333 0.503597828730918 0.00543863833262669 0.716176579748984 4.46612416429033 Q10571 MN1 Q10571.S1075.p_MN1 Q10571_S1075s _1_1_1075_1075 Q10571 Q10571 Transcriptional activator MN1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8282.8282.3 11.45 11.45 1.15 4 1 1 0 579.9953 1658.0001 S1075s TMT10 1072 (K) ASRsPLVTGSPK (L) AS(0.0)RS(0.99)PLVT(0.0)GS(0.0)PK K:TMT10,s:Phosphorylated S MN1 136683.6 1 1 5795.1 16.22 HUMAN 1 2.9792 22.6451 ALVKENGSCQIITIT-p Q9H7F0;S1219-p ALVKENGSCQIITIT 0.165663817311685 0.00259997565261951 -0.429 -1.01766666666667 15.6167917887326 39.3951233490737 -0.429 -1.01766666666667 0.0274360017019186 0.000114944359625937 -2.99495132343 -9.86259424362602 Q9H7F0 ATP13A3 Q9H7F0.S1219.p_ATP13A3 Q9H7F0_S1219s_1_1_1219_1219 Q9H7F0 Q9H7F0 Probable cation-transporting ATPase 13A3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24127.24127.3 9.79 9.79 2.158 3 1 1 0 729.3897 2105.204 N1217n S1219s TMT10 1212 (K) ALVKEnGsCQIITIT (-) ALVKEN(1.0)GS(0.99)CQIIT(0.0)IT(0.0) K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S ATP13A3 139866.1 5 5 2758.1 71.6 HUMAN 1 -15.6168 -39.3951 ALVNDSLSDVTSTTS-p Q7Z2W4;S494-p ALVNDSLSDVTSTTS 0.645300291181386 0.179533879125167 -0.0646666666666667 -0.140666666666667 3.55945939235324 9.80864707900576 -0.0646666666666667 -0.140666666666667 0.440609706973842 0.104504572280316 -0.831923948567671 -1.94771358013182 Q7Z2W4 ZC3HAV1 Q7Z2W4.S494.p_ZC3HAV1 Q7Z2W4_S494s _1_1_494_494 Q7Z2W4 Q7Z2W4|Q7Z2W4-2 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21858.21858.3 19.11 19.11 1.268 8 1 1 0 721.0258 2081.0924 S494s TMT10 486 (R) VALVNDSLsDVTSTTSSR (V) VALVNDS(0.0)LS(0.99)DVT(0.0)S(0.0)T(0.0)T(0.0)S(0.0)S(0.0)R s:Phosphorylated S ZC3HAV1 103198.2 2 24 361.2 343.37 HUMAN 1 -3.5595 -9.8086 ALVTSQNSDLLDDEE-p Q03112-3;S1073-p ALVTSQNSDLLDDEE 0.483726315617236 0.174335452965156 0.122666666666667 0.241666666666667 5.80947404952434 9.97760082010477 0.122666666666667 0.241666666666667 0.262453636749385 0.100517092509584 1.25054760201537 1.97702173392574 Q03112 MECOM Q03112.3.S1073.p_MECOM Q03112-3_S1073s _1_1_1073_1073 Q03112-3 Q03112-3|E7EQ57|Q03112-4|A0A0C3SFZ7 Isoform 2 of MDS1 and EVI1 complex locus protein EVI1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32575.32575.4 8.49 8.49 1.269 4 1 1 0 1087.0011 4265.0244 S1073s TMT10 1066 (K) ALVTSQNsDLLDDEEVEDEVLLDEEDEDNDITGK (T) ALVT(0.0)S(0.0)QNS(0.99)DLLDDEEVEDEVLLDEEDEDNDIT(0.0)GK K:TMT10,s:Phosphorylated S MECOM 141074 1 8 937.1 198.37 HUMAN 1 5.8095 9.9776 ALVVDNGSGMCKAGF-p P60709;S14-p ALVVDNGSGMCKAGF 0.986720829133154 0.28594411963965 -0.00433333333333334 -0.117333333333333 0.118106255205443 7.17315047277825 -0.00433333333333333 -0.117333333333333 0.973171483526715 0.191727739863576 -0.0352141779281374 -1.4908673921909 P60709 ACTB P60709.S14.p_ACTB P60709_S14s_1_1_14_14 P60709 P60709|G5E9R0 Actin, cytoplasmic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27518.27518.3 12.12 12.12 99 1 1 1 0 716.3119 2050.9623 S14s M16m Acetyl 2 (M) DDDIAALVVDNGsGmCK (A) DDDIAALVVDNGS(1.0)GM(1.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,m:Oxidized methionine ACTB 42078.3 2 4 1233.99 163.71 HUMAN 1 -0.1181 -7.1732 AMAARPHSIDGRVVE-p P22626;S85-p AMAARPHSIDGRVVE 0.407521297549467 0.233077536653817 0.121 0.126 7.19834657093478 8.32879981489186 0.121 0.126 0.190618629566976 0.146933227568023 1.49569001974749 1.69159637462002 P22626 HNRNPA2B1 P22626.S85.p_HNRNPA2B1 P22626_S85s _1_1_85_85 P22626 P22626|P22626-2|A0A087WUI2 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.39330.39330.3 20.71 15.81 4.474 4 1 1 0 1046.1575 3056.492 S85s TMT10 63 (R) GFGFVTFSSMAEVDAAMAARPHsIDGR (V) GFGFVT(0.0)FS(0.0)S(0.0)MAEVDAAMAARPHS(0.99)IDGR s:Phosphorylated S HNRNPA2B1 37486.1 11 3 299.1 378.08 HUMAN 1 7.1983 8.3288 AMAGRFGSRDALDLG-p Q9NYQ7-2;S3145-p AMAGRFGSRDALDLG 0.659670637520327 0.100504954607395 0.059 -0.185666666666667 3.38642280293885 13.182970338928 0.059 -0.185666666666667 0.458519404508137 0.0480510592828636 0.797863349059229 -2.54267146213375 Q9NYQ7 CELSR3 Q9NYQ7.2.S3145.p_CELSR3 Q9NYQ7-2_S3145s _1_1_3145_3145 Q9NYQ7-2 Q9NYQ7-2 Isoform 2 of Cadherin EGF LAG seven-pass G-type receptor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17357.17357.3 8.37 8.37 99 1 1 1 0 561.9513 1603.8754 S3145s TMT10 3143 (R) FGsRDALDLGAPR (E) FGS(1.0)RDALDLGAPR s:Phosphorylated S CELSR3 363540.1 2 5 1821.1 112.78 HUMAN 1 3.3864 -13.183 AMCSRYDSIPVSTSL-p Q5JS54-2;S60-p AMCSRYDSIPVSTSL 0.291864377986462 0.945818175866251 0.162 -0.0106666666666666 10.0889649273545 0.346940474013964 0.162 -0.0106666666666666 0.0979723459274736 0.923221591007364 1.99717104014825 -0.10094538930788 Q5JS54 PSMG4 Q5JS54.2.S60.p_PSMG4 Q5JS54-2_S60s _1_1_60_60 Q5JS54-2 Q5JS54-2|D6RB92|Q5JS54-3 Isoform 2 of Proteasome assembly chaperone 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26005.26005.3 20.98 20.98 3.992 11 1 1 0 965.4675 2814.4206 S60s TMT10 58 (R) YDsIPVSTSLLGDTSDTTSTGLAQR (L) Y(0.0)DS(0.99)IPVS(0.0)T(0.0)S(0.0)LLGDT(0.0)S(0.0)DT(0.0)T(0.0)S(0.0)T(0.0)GLAQR s:Phosphorylated S PSMG4 17941 1 1 5282.1 20.98 HUMAN 1 10.089 -0.3469 AMDNHSDSEEELAAF-p Q86VR2;S260-p AMDNHSDSEEELAAF 0.236551014520431 0.053205728814298 0.194333333333333 0.321333333333333 11.997387340167 16.9923385840361 0.194333333333333 0.321333333333333 0.0631337034513031 0.0199878527615243 2.33187117430374 3.25864432028631 Q86VR2 FAM134C Q86VR2.S260.p_FAM134C Q86VR2_S260s _1_1_260_260 Q86VR2 Q86VR2|K7EQI9|Q86VR2-2 Reticulophagy regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22004.22433.3 25.77 25.77 1.13 4 1 1 0 1073.1216 3137.3989 S260s TMT10 253 (R) AMDNHSDsEEELAAFCPQLDDSTVAR (E) AMDNHS(0.0)DS(0.99)EEELAAFCPQLDDS(0.0)T(0.0)VAR C:Carbamidomethylation,s:Phosphorylated S RETREG3 51794.7 2 4 1136.1 173.56 HUMAN 1 11.9974 16.9923 AMDVNRESCQISQNL-p Q53SF7;S260-p AMDVNRESCQISQNL 0.521914890520653 0.0125465784513825 0.088 0.432333333333333 5.2208863500196 26.5259694552579 0.088 0.432333333333333 0.300546285621632 0.00222537422946408 1.14438695372093 5.43360522712656 Q53SF7 COBLL1 Q53SF7.S260.p_COBLL1 Q53SF7_S260s_1_1_260_260 Q53SF7 Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25168.25168.4 14.38 13.76 3.721 3 1 1 0 799.8889 3115.5626 S260s N266n TMT10 250 (R) ELYAMDVNREsCQISQnLDIMK (E) ELY(0.0)AMDVN(0.0)RES(0.99)CQIS(0.0)QN(0.99)LDIMK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated COBLL1 132526.1 1 4 163.1 494.83 HUMAN 1 5.2209 26.526 AMELLKVSKDKRALK-p Q9Y3U8;S64-p AMELLKVSKDKRALK 0.298403351569748 0.293224580729982 -0.169 0.105666666666667 9.87222187613161 7.03297087276924 -0.169 0.105666666666667 0.102985910366157 0.198017198864098 -1.95951934913539 1.46637632344155 Q9Y3U8 RPL36 Q9Y3U8.S64.p_RPL36 Q9Y3U8_S64s _1_1_64_64 Q9Y3U8 Q9Y3U8|J3QSB5 60S ribosomal protein L36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21156.21156.3 12.41 12.41 99 1 1 1 0 596.0227 1706.0853 S64s TMT10 57 (R) AMELLKVsK (D) AMELLKVS(1.0)K K:TMT10,s:Phosphorylated S RPL36 12310.6 2 1 6321.1 12.41 HUMAN 1 -9.8722 7.033 AMEPGNGSLDLGGDS-p Q00839;S59-p AMEPGNGSLDLGGDS 0.3626106053244 0.0728054691863944 0.129333333333333 0.220666666666667 8.18564940265681 15.1167798449191 0.129333333333333 0.220666666666667 0.151857085241367 0.0307837848821743 1.66735134249547 2.89847269691454 Q00839 HNRNPU Q00839.S59.p_HNRNPU Q00839_S59s_1_1_59_59 Q00839 Q00839|Q00839-2|A0A1W2PPS1|A0A1X7SBS1 Heterogeneous nuclear ribonucleoprotein U HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21434.21645.4 28.62 28.62 7.817 2 1 1 0 859.8954 3355.6022 N57n S59s TMT10 38 (R) LQAALDDEEAGGRPAMEPGnGsLDLGGDSAGR (S) LQAALDDEEAGGRPAMEPGN(1.0)GS(0.99)LDLGGDS(0.0)AGR n:Deamidated,s:Phosphorylated S HNRNPU 91324.5 18 3 657.1 253.07 HUMAN 1 8.1856 15.1168 AMFVHARSYEDLTES-p X6R3V9;S153-p AMFVHARSYEDLTES 0.318098337086169 0.0503279155104688 -0.2 0.281666666666667 9.3138340259934 17.3509037883699 -0.2 0.281666666666667 0.117116098807358 0.0184038896753712 -1.86270376657763 3.32946830667341 X6R3V9 MON1A X6R3V9.S153.p_MON1A X6R3V9_S153s _1_1_153_153 X6R3V9 X6R3V9|A0A0A0MSQ9|Q86VX9 MON1 homolog A (Yeast), isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8529.8529.3 23.78 23.78 3.199 6 1 1 0 769.6548 2226.9836 S153s Hydrogen 153 (R) sYEDLTESEDGAASGDSHK (E) S(0.99)Y(0.0)EDLT(0.0)ES(0.0)EDGAAS(0.0)GDS(0.0)HK K:TMT10-Lys-Only,s:Phosphorylated S MON1A 73464.1 3 3 2671.1 74.31 HUMAN 1 -9.3138 17.3509 AMGADYLSCDSRLIS-p A0A1B0GTW1;S972-p AMGADYLSCDSRLIS 0.664373844356471 0.980270543149773 -0.0693333333333333 -0.0033333333333333 3.32319078461453 0.123603981517902 -0.0693333333333334 -0.00333333333333331 0.465244150577357 0.97194032685789 -0.785325163995448 -0.0368276348944057 A0A1B0GTW1 NotFound A0A1B0GTW1.S972.p_NotFound A0A1B0GTW1_S972s _1_1_972_972 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27318.27318.3 21.51 21.51 3.085 6 1 1 0 750.6542 2169.9816 S972s TMT10 960 (R) MSYLTAMGADYLsCDSR (L) MS(0.0)Y(0.0)LT(0.0)AMGADY(0.0)LS(0.99)CDS(0.0)R C:Carbamidomethylation,s:Phosphorylated S TJP2 141123.7 10 21 41.1 827.72 HUMAN 1 -3.3232 -0.1236 AMGISIPSPVMENNF-p Q9NPI1-2;S622-p AMGISIPSPVMENNF 0.370734568672993 0.026865308314239 0.128 0.303333333333333 7.9907101745398 21.3213155718089 0.128 0.303333333333333 0.158828700474449 0.00737680736848595 1.6335490250744 4.1642035733879 Q9NPI1 BRD7 Q9NPI1.2.S622.p_BRD7 Q9NPI1-2_S622s_1_1_622_622 Q9NPI1-2 Q9NPI1-2 Isoform 2 of Bromodomain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32053.32053.5 20.43 18.11 5.495 6 1 1 0 962.2682 4709.3239 S622s M625m N627n N628n TMT10 615 (K) AMGISIPsPVmEnnFVDLTEDTEEPKKTDVAECGPGGS (-) AM(0.0)GIS(0.0)IPS(0.99)PVM(0.99)EN(1.0)N(1.0)FVDLT(0.0)EDT(0.0)EEPKKT(0.0)DVAECGPGGS(0.0) K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine,n:Deamidated BRD7 74721.8 22 5 1237.1 163.17 HUMAN 1 7.9907 21.3213 AMISQPPTPPTGQPV-p Q6PKG0;T1071-p AMISQPPTPPTGQPV 0.203420663761674 0.00649646456285066 -0.206666666666667 -0.482333333333333 13.412091406085 31.4514064286126 -0.206666666666667 -0.482333333333333 0.0455817357838139 0.000715911530335368 -2.5855955318482 -6.87456686939608 Q6PKG0 LARP1 Q6PKG0.T1071.p_LARP1 Q6PKG0_T1071t _1_1_1071_1071 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13231.13231.5 20.19 16.86 5.066 7 1 1 0 743.9747 3635.8674 T1071t TMT10 1054 (R) CPSQSSSRPAAMISQPPtPPTGQPVREDAK (W) CPS(0.0)QS(0.0)S(0.0)S(0.0)RPAAMIS(0.0)QPPT(0.99)PPT(0.0)GQPVREDAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T LARP1 123907.4 15 64 28.1 931.95 HUMAN 1 -13.4121 -31.4514 AMKDIHYSVKTNKST-p A0A087X020;S143-p AMKDIHYSVKTNKST 0.0879384467271527 0.0890843481671065 -0.432333333333333 -0.218 22.5051993200042 13.8980990865415 -0.432333333333333 -0.218 0.00561668499916938 0.0407558627791655 -4.43842155061527 -2.67263918849628 A0A087X020 NotFound A0A087X020.S143.p_NotFound A0A087X020_S143s _1_1_143_143 A0A087X020 Q9Y3A5|A0A087X020 Ribosome maturation protein SBDS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11421.11421.3 12.08 5.73 4.152 2 1 1 0 467.2515 1319.7724 S143s TMT10 139 (K) DIHYsVK (T) DIHY(0.0)S(0.99)VK K:TMT10,s:Phosphorylated S SBDS 29149.4 2 3 3987.1 39.67 HUMAN 1 -22.5052 -13.8981 AMKFLEASLEEVSRE-p Q6ZRS2;S2323-p AMKFLEASLEEVSRE 0.331271836010423 0.220025441196734 0.189666666666667 0.137 8.9639292764704 8.65630680213816 0.189666666666667 0.137 0.1269425073993 0.13626029341415 1.80211871303837 1.74826579059238 Q6ZRS2 SRCAP Q6ZRS2.S2323.p_SRCAP Q6ZRS2_S2323s _1_1_2323_2323 Q6ZRS2 Q6ZRS2|Q6ZRS2-2 Helicase SRCAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24968.24968.3 10.7 10.7 3.936 2 1 1 0 773.0746 2237.2429 S2323s TMT10 2319 (K) FLEAsLEEVSREELK (Q) FLEAS(0.99)LEEVS(0.0)REELK K:TMT10,s:Phosphorylated S SRCAP 345203 1 6 219.1 428.72 HUMAN 1 8.9639 8.6563 AMKFLRASEEHLKQH-p Q32Q12;S184-p AMKFLRASEEHLKQH 0.532812192476174 0.425532586261363 -0.0956666666666667 0.125666666666667 5.05983401332732 4.93812487376065 -0.0956666666666667 0.125666666666667 0.311900878984471 0.320765397434436 -1.11501179309378 1.09248837019383 Q32Q12 NotFound Q32Q12.S184.p_NotFound Q32Q12_S184s _1_1_184_184 Q32Q12 Q32Q12|P22392-2|J3KPD9 Nucleoside diphosphate kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13169.13169.3 10.31 4.36 99 1 1 1 0 589.9914 1687.9896 S184s TMT10 180 (K) FLRAsEEHLK (Q) FLRAS(1.0)EEHLK K:TMT10,s:Phosphorylated S NME1-NME2 32926.7 2 5 2569.1 78.26 HUMAN 1 -5.0598 4.9381 AMKFRRGSGHPAYAE-p Q6UX71;S506-p AMKFRRGSGHPAYAE 0.229977783899196 0.0264534344281198 0.261 0.382666666666667 12.2684791874852 21.41738050377 0.261 0.382666666666667 0.0593132991541836 0.0072154255450245 2.38004781924987 4.18567964690568 Q6UX71 PLXDC2 Q6UX71.S506.p_PLXDC2 Q6UX71_S506s _1_1_506_506 Q6UX71 Q6UX71|Q6UX71-2|Q6UX71-3 Plexin domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8603.8603.3 22.15 22.15 10.182 2 1 1 0 698.0068 2012.0399 S506s Hydrogen 504 (R) RGsGHPAYAEVEPVGEK (E) RGS(0.99)GHPAY(0.0)AEVEPVGEK K:TMT10-Lys-Only,s:Phosphorylated S PLXDC2 60152.6 5 1 5175.1 22.15 HUMAN 1 12.2685 21.4174 AMKGKRKTLNASDVL-p Q9NRF9;T63-p AMKGKRKTLNASDVL 0.380643803112374 0.288249828296497 -0.118333333333333 -0.143666666666667 7.75010548304005 7.12767223013877 -0.118333333333333 -0.143666666666667 0.167876324320869 0.193746014266791 -1.59177836569382 -1.48292636079491 Q9NRF9 POLE3 Q9NRF9.T63.p_POLE3 Q9NRF9_T63t _1_1_63_63 Q9NRF9 Q9NRF9 DNA polymerase epsilon subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.36616.36616.3 26.49 26.49 4.991 3 1 1 0 794.0306 2300.11 T63t TMT10 63 (K) tLNASDVLSAMEEMEFQR (F) T(0.99)LNAS(0.0)DVLS(0.0)AMEEMEFQR t:Phosphorylated T POLE3 16916.3 3 1 2808.1 69.83 HUMAN 1 -7.7501 -7.1277 AMKRALASIDSKLNQ-p P18206-2;S272-p AMKRALASIDSKLNQ 0.390034197953382 0.350993886673538 -0.137666666666667 0.0993333333333334 7.56343904825631 6.02696764348634 -0.137666666666667 0.0993333333333334 0.175249220601724 0.249633712579082 -1.55932352274096 1.28905829378058 P18206 VCL P18206.2.S272.p_VCL P18206-2_S272s _1_1_272_272 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15052.15052.2 11.25 4.06 2.647 2 1 1 0 671.8726 1262.772 S272s TMT10 269 (R) ALAsIDSK (L) ALAS(0.99)IDS(0.0)K K:TMT10,s:Phosphorylated S VCL 117290.9 2 2 319.1 365.38 HUMAN 1 -7.5634 6.027 AMKRLRDSPPPKLKN-p Q9NQU5;S616-p AMKRLRDSPPPKLKN 0.348816513983719 0.109031912854997 0.153666666666667 -0.265 8.49946154443239 12.7144730212439 0.153666666666667 -0.265 0.141271268750147 0.0535245097189874 1.72171336301979 -2.45842796436939 Q9NQU5 PAK6 Q9NQU5.S616.p_PAK6 Q9NQU5_S616s _1_1_616_616 Q9NQU5 Q9NQU5 Serine/threonine-protein kinase PAK 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7983.7983.3 8.24 8.24 99 1 1 1 0 483.2737 1367.8411 S616s TMT10 613 (R) LRDsPPPK (L) LRDS(1.0)PPPK K:TMT10,s:Phosphorylated S PAK6 75380.9 1 3 2876.1 67.52 HUMAN 1 8.4995 -12.7145 AMKVTFQTPLRDPQT-p Q9Y6A5;T59-p AMKVTFQTPLRDPQT 0.372507729009431 0.0110471274398859 0.122 -0.393666666666667 7.95644111028366 27.4077930366692 0.122 -0.393666666666667 0.160086934707627 0.00181643849161385 1.6276033741742 -5.67261649316181 Q9Y6A5 TACC3 Q9Y6A5.T59.p_TACC3 Q9Y6A5_T59t _1_1_59_59 Q9Y6A5 Q9Y6A5|Q8IX09 Transforming acidic coiled-coil-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11526.11526.4 15.48 15.48 4.96 3 1 1 0 502.0112 1925.0555 T59t TMT10 55 (K) VTFQtPLRDPQTHR (I) VT(0.0)FQT(0.99)PLRDPQT(0.0)HR t:Phosphorylated T TACC3 91213.8 2 2 1278.1 159 HUMAN 1 7.9564 -27.4078 AMLRERGTPPVDPKL-p P48634;T782-p AMLRERGTPPVDPKL 0.456329906764675 0.423965640498106 -0.140666666666667 -0.104666666666667 6.28384030192991 4.96202556302664 -0.140666666666667 -0.104666666666667 0.235296772329899 0.319004965895459 -1.33497390322683 -1.09687419583533 P48634 PRRC2A P48634.T782.p_PRRC2A P48634_T782t _1_1_782_782 P48634 P48634|P48634-3|P48634-2|P48634-4 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10757.10757.2 13.06 7.24 99 1 1 1 0 674.8673 1268.7615 T782t TMT10 781 (R) GtPPVDPK (L) GT(1.0)PPVDPK K:TMT10,t:Phosphorylated T PRRC2A 229315.4 6 12 36.1 882.05 HUMAN 1 -6.2838 -4.962 AMNKRLGSLVDEFKE-p P12956;S520-p AMNKRLGSLVDEFKE 0.0552688318450056 0.0392043050534768 1.019 -0.527666666666667 27.4214459678931 18.8840266669139 1.019 -0.527666666666667 0.00181073711382103 0.0129299645240669 5.68437287357363 -3.64027140524278 P12956 XRCC6 P12956.S520.p_XRCC6 P12956_S520s _1_1_520_520 P12956 P12956|P12956-2|B1AHC9 X-ray repair cross-complementing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30868.30868.2 13.06 2.1 99 1 1 1 0 773.4193 1465.8667 S520s TMT10 518 (R) LGsLVDEFK (E) LGS(1.0)LVDEFK K:TMT10,s:Phosphorylated S XRCC6 70127.1 3 13 815.1 220.5 HUMAN 1 27.4214 -18.884 AMNSALASDSIGLQK-p P0CAP1-3;S138-p AMNSALASDSIGLQK 0.332256356782789 0.0161347105288124 -0.181333333333333 0.342666666666667 8.93683057510961 24.751908853962 -0.181333333333333 0.342666666666667 0.127737067731632 0.00334818244193315 -1.79742781964622 4.97508673472474 P0CAP1 POLR2M P0CAP1.3.S138.p_POLR2M P0CAP1-3_S138sS140s_2_2_138_140 P0CAP1-3 P0CAP1-3|P0CAP1-9 Isoform 3 of Myocardial zonula adherens protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.39892.39908.5 7.33 2.79 7.286 9 2 2 0 1189.5463 5782.8482 N102n S138s S140s Hydrogen 99 (K) EEMnYIKDVSHAQQEYLENHIQTQSSALDRFNAMNSALAsDsIGLQK (T) EEMN(0.99)Y(0.0)IKDVS(0.0)HAQQEY(0.0)LEN(0.0)HIQT(0.0)QS(0.0)S(0.0)ALDRFN(0.0)AMN(0.0)S(0.0)ALAS(0.99)DS(0.99)IGLQK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S MYZAP 50608.5 1 1 7194.1 7.33 HUMAN 1 -8.9368 24.7519 AMPGRPESPPVFRSQ-p Q63ZY3-2;S375-p AMPGRPESPPVFRSQ 0.965045971864258 0.0645376953440098 -0.00700000000000001 -0.237666666666667 0.298189557891084 15.8437443141232 -0.007 -0.237666666666667 0.933643427340379 0.0260390759648831 -0.0872067390175782 -3.03612531714788 Q63ZY3 KANK2 Q63ZY3.2.S375.p_KANK2 Q63ZY3-2_S375s _1_1_375_375 Q63ZY3-2 Q63ZY3-2|Q63ZY3-3 Isoform 2 of KN motif and ankyrin repeat domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19502.19708.3 12.08 6.86 99 1 1 1 0 645.3356 1854.0257 S375s TMT10 366 (R) ALAMPGRPEsPPVFR (S) ALAMPGRPES(1.0)PPVFR s:Phosphorylated S KANK2 92718.4 8 5 1442.1 141.99 HUMAN 1 -0.2982 -15.8437 AMPIPAASPTPASPA-p Q99700;S728-p AMPIPAASPTPASPA 0.382169532450833 0.174659458394764 0.122666666666667 0.164333333333333 7.72777539776335 9.96686365065793 0.122666666666667 0.164333333333333 0.168741715580717 0.100765910846336 1.58789835849545 1.97515834622372 Q99700 ATXN2 Q99700.S728.p_ATXN2 Q99700_S728s _1_1_728_728 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31309.31309.3 29.02 29.02 1.815 9 1 1 0 1515.4408 4464.3394 S728s TMT10 695 (R) QNSIGNTPSGPVLASPQAGIIPTEAVAMPIPAAsPTPASPASNR (A) Q(0.0)N(0.0)S(0.0)IGN(0.0)T(0.0)PS(0.0)GPVLAS(0.0)PQAGIIPT(0.0)EAVAM(0.0)PIPAAS(0.99)PT(0.0)PAS(0.0)PAS(0.0)N(0.0)R s:Phosphorylated S ATXN2 140907.9 25 13 176.1 481.52 HUMAN 1 7.7278 9.9669 AMPQPVPTA______-p P23396-2;T258-p AMPQPVPTA______ 0.600746876542819 0.988931562210736 0.110666666666667 0.00266666666666667 4.08695490802772 0.0728060023574808 0.110666666666667 0.00266666666666667 0.390215493626557 0.983375535705328 0.933715030063186 0.021815412236422 P23396 RPS3 P23396.2.T258.p_RPS3 P23396-2_T258t _1_1_258_258 P23396-2 P23396-2|E9PL09|E9PPU1 Isoform 2 of 40S ribosomal protein S3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17800.17800.3 14.4 13.67 99 1 1 1 0 704.7039 2032.1302 T258t TMT10 244 (K) GGKPEPPAMPQPVPtA (-) GGKPEPPAMPQPVPT(1.0)A K:TMT10,t:Phosphorylated T RPS3 28657.3 5 3 1841.1 111.56 HUMAN 1 4.087 0.0728 AMQDAEVSKSDIGEV-p P38646;S376-p AMQDAEVSKSDIGEV 0.148266672319898 0.149438481648498 0.239666666666667 0.159333333333333 16.766308243977 10.8635784084548 0.239666666666667 0.159333333333333 0.0210556753427083 0.0819675886689917 3.216747826821 2.13127902765588 P38646 HSPA9 P38646.S376.p_HSPA9 P38646_S376s _1_1_376_376 P38646 P38646 Stress-70 protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27889.27889.3 15.98 15.98 1.251 3 1 1 0 982.1707 2864.5262 S376s TMT10 369 (K) AMQDAEVsKSDIGEVILVGGMTR (M) AMQDAEVS(0.99)KS(0.0)DIGEVILVGGMT(0.0)R K:TMT10,s:Phosphorylated S HSPA9 73964.5 4 31 367.2 341.38 HUMAN 1 16.7663 10.8636 AMRPGPESPSTRRLL-p A0A1B0GV70;S203-p AMRPGPESPSTRRLL 0.390958401727834 0.416291797803622 0.16 -0.085 7.53629503342699 5.06306680002289 0.16 -0.085 0.176347982966557 0.311668793644644 1.55460004404601 -1.11537512364595 A0A1B0GV70 NotFound A0A1B0GV70.S203.p_NotFound A0A1B0GV70_S203s _1_1_203_203 A0A1B0GV70 A0A1B0GV70|Q96N21-2 AP-4 complex accessory subunit Tepsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12622.12647.4 15.75 9.49 1.625 4 1 1 0 595.303 2298.2186 S203s TMT10 189 (K) AAEVVASAMRPGPEsPSTRR (L) AAEVVAS(0.0)AMRPGPES(0.99)PS(0.0)T(0.0)RR s:Phosphorylated S TEPSIN 62782.6 8 2 2632.1 75.83 HUMAN 1 7.5363 -5.0631 AMRPRSRSLSPGRSP-p Q6P0Q8;S299-p AMRPRSRSLSPGRSP 0.345614283878969 0.752400094712724 -0.136333333333333 -0.0476666666666666 8.57410404106684 1.70662664293586 -0.136333333333333 -0.0476666666666666 0.13886397597739 0.675052166944911 -1.73463734601372 -0.44275680986101 Q6P0Q8 MAST2 Q6P0Q8.S299.p_MAST2 Q6P0Q8_S299sS301s_2_2_299_301 Q6P0Q8 Q6P0Q8|Q6P0Q8-2|E7ERL6 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27480.27557.4 20.7 20.7 1.128 6 2 2 0 746.5998 2823.4371 S299s S301s Hydrogen 299 (R) sLsPGRSPVSFDSEIIMMNHVYK (E) S(0.99)LS(0.99)PGRS(0.0)PVS(0.0)FDS(0.0)EIIMMNHVY(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S MAST2 197687.5 4 70 121.1 549.41 HUMAN 1 -8.5741 -1.7066 AMRRRRSSDPLGDTA-p Q7Z6Z7;S649-p AMRRRRSSDPLGDTA 0.813083216141779 0.225870754095915 0.038 0.124333333333333 1.72698964020247 8.50940604153219 0.038 0.124333333333333 0.671894422532535 0.14094815515635 0.447455624399412 1.72285213148968 Q7Z6Z7 HUWE1 Q7Z6Z7.S649.p_HUWE1 Q7Z6Z7_S649s _1_1_649_649 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.33490.33490.2 10.91 10.91 1.198 5 1 1 0 1222.5646 2364.155 S649s TMT10 648 (R) SsDPLGDTASNLGSAVDELMR (H) S(0.0)S(0.99)DPLGDT(0.0)AS(0.0)NLGS(0.0)AVDELMR s:Phosphorylated S HUWE1 485818.9 2 4 11.1 1210.45 HUMAN 1 1.727 8.5094 AMRVLSTSTDLEAAV-p Q7Z460;S797-p AMRVLSTSTDLEAAV 0.427414948238645 1 -0.196 0 6.79802324431111 0 -0.196 0 0.209024732140537 1 -1.42560984130698 0 Q7Z460 CLASP1 Q7Z460.S797.p_CLASP1 Q7Z460_S797s _1_1_797_797 Q7Z460 Q7Z460 CLIP-associating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30022.30022.3 11.1 11.1 1.134 4 1 1 0 984.559 2871.7122 S797s TMT10 793 (R) VLSTsTDLEAAVADALKKPVR (R) VLS(0.0)T(0.0)S(0.99)T(0.0)DLEAAVADALKKPVR K:TMT10,s:Phosphorylated S CLASP1 170474.5 15 35 158.4 498.15 HUMAN 1 -6.798 0 AMSAIVRSPEHQPSA-p O14578-4;S1364-p AMSAIVRSPEHQPSA 0.87289946291738 0.275780943415972 -0.0313333333333333 -0.152333333333333 1.15537944965349 7.37138557463341 -0.0313333333333334 -0.152333333333333 0.766411574699432 0.183172993338004 -0.312412095533319 -1.52543427306279 O14578 CIT O14578.4.S1364.p_CIT O14578-4_S1364s _1_1_1364_1364 O14578-4 O14578-4|O14578-3 Isoform 4 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22799.22799.4 22.97 20.72 1.114 6 1 1 0 825.4241 3218.6976 S1364s TMT10 1354 (R) QQIAMSAIVRsPEHQPSAMSLLAPPSSR (R) QQIAMS(0.0)AIVRS(0.99)PEHQPS(0.0)AMS(0.0)LLAPPS(0.0)S(0.0)R s:Phosphorylated S CIT 238656.7 4 12 366.1 342.11 HUMAN 1 -1.1554 -7.3714 AMSQEAASPATVQSR-p Q9C075;S276-p AMSQEAASPATVQSR 0.704636067514992 0.269508476742249 0.0626666666666667 0.128 2.85768951045393 7.49832702862825 0.0626666666666667 0.128 0.517882277161702 0.177896456348945 0.69135618166417 1.54753265184832 Q9C075 KRT23 Q9C075.S276.p_KRT23 Q9C075_S276s _1_1_276_276 Q9C075 Q9C075 Keratin, type I cytoskeletal 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8516.8516.3 17.37 17.37 3.921 5 1 1 0 753.3504 2178.0658 S276s TMT10 265 (K) EQSAAMSQEAAsPATVQSR (Q) EQS(0.0)AAMS(0.0)QEAAS(0.99)PAT(0.0)VQS(0.0)R s:Phosphorylated S KRT23 48301.4 1 9 2033.1 101.49 HUMAN 1 2.8577 7.4983 AMSRALPSEDEEGQD-p Q8NF91;S8305-p AMSRALPSEDEEGQD 0.476079193431219 0.0194104640401041 -0.105666666666667 0.323666666666667 5.93421779135548 23.5186357229884 -0.105666666666667 0.323954094452218 0.255022336766928 0.0044477096427156 -1.27283615662574 4.67272715617479 Q8NF91 SYNE1 Q8NF91.S8305.p_SYNE1 Q8NF91_S8305s _1_1_8305_8305 Q8NF91 Q8NF91|Q8NF91-4|A0A0C4DG40|E7ENN3|Q8NF91-2|Q8NF91-8|Q8NF91-11|Q8NF91-3|Q8NF91-9|F8WAI0|Q5JV20 Nesprin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19094.19094.3 16.38 12.09 12.441 2 1 1 0 889.0875 2585.2771 S8305s TMT10 8302 (R) ALPsEDEEGQDDKDFYLR (G) ALPS(0.99)EDEEGQDDKDFY(0.0)LR K:TMT10,s:Phosphorylated S SYNE1 1017743.3 2 6 1772.1 116.1 HUMAN 1 -5.9342 23.5186 AMTMPPVSPVGAEGP-p O15020;S2359-p AMTMPPVSPVGAEGP 0.993614071836454 0.0256108065063911 0.00133333333333332 -0.305 0.0588049700020345 21.6538666554029 0.00133333333333333 -0.305 0.98655091338255 0.00683303010997017 0.0176495677421545 -4.23883131518106 O15020 SPTBN2 O15020.S2359.p_SPTBN2 O15020_S2359s _1_1_2359_2359 O15020 O15020|A4QPE4 Spectrin beta chain, non-erythrocytic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26732.27168.3 16.44 16.44 4.227 2 1 1 0 739.7175 2137.1711 S2359s TMT10 2352 (R) AMTMPPVsPVGAEGPVVLR (S) AMT(0.0)MPPVS(0.99)PVGAEGPVVLR s:Phosphorylated S SPTBN2 272689.3 4 15 781.1 225.92 HUMAN 1 0.0588 -21.6539 AMTRSGLSLEELRIV-p O60333-2;S1011-p AMTRSGLSLEELRIV 0.360048449906009 0.0755575524069862 0.177 -0.212333333333333 8.24602722349489 14.889043858264 0.177 -0.212333333333333 0.149760498720892 0.0324411031746172 1.67781497277272 -2.85582038983668 O60333 KIF1B O60333.2.S1011.p_KIF1B O60333-2_S1011s _1_1_1011_1011 O60333-2 O60333-4|Q4R9M9|A0A087WWA3|O60333-2 Isoform 2 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19254.19254.2 10.41 4.14 3.651 2 1 1 0 656.8403 1232.7048 S1011s TMT10 1008 (R) SGLsLEELR (I) S(0.0)GLS(0.99)LEELR s:Phosphorylated S KIF1B 200628.3 4 4 606.1 262.24 HUMAN 1 8.246 -14.889 AMTVEKASPVGDGNF-p Q86YS7;S852-p AMTVEKASPVGDGNF 0.947166532257833 0.00190088044114978 0.021 -0.867333333333333 0.467123370115529 42.6774372552222 0.021 -0.867333333333333 0.898023419982156 5.39829078334483e-05 0.134294408838532 -11.4037468430885 Q86YS7 C2CD5 Q86YS7.S852.p_C2CD5 Q86YS7_S852s _1_1_852_852 Q86YS7 Q86YS7 C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14327.14327.3 11.94 11.94 4.459 2 1 1 0 739.7113 2137.1476 S852s TMT10 845 (K) AMTVEKAsPVGDGNFR (N) AMT(0.0)VEKAS(0.99)PVGDGNFR K:TMT10,s:Phosphorylated S C2CD5 111985.5 2 1 349.2 351.16 HUMAN 1 0.4671 -42.6774 ANASRARSEQFINLR-p P07384;S474-p ANASRARSEQFINLR 0.344472694883701 0.49002122730762 -0.192 0.0953333333333333 8.59693253699772 4.14127940638286 -0.192 0.0953333333333333 0.138135958746431 0.385364814700241 -1.73858966186366 0.94387672145304 P07384 CAPN1 P07384.S474.p_CAPN1 P07384_S474s _1_1_474_474 P07384 P07384 Calpain-1 catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12628.12628.3 12.46 12.46 99 1 1 1 0 514.9379 1462.8328 S474s TMT10 472 (R) ARsEQFINLR (E) ARS(1.0)EQFINLR s:Phosphorylated S CAPN1 82516.1 1 7 1866.1 110.2 HUMAN 1 -8.5969 4.1413 ANDGRTLSPGILGRL-p Q5D0E6;S209-p ANDGRTLSPGILGRL 0.994556694699213 0.0362628473776946 0.00133333333333333 -0.373666666666667 0.0479701984140256 19.3931882394842 0.00133333333333333 -0.373666666666667 0.989015231688306 0.0114995587422711 0.0144152869227522 -3.74654442839412 Q5D0E6 DALRD3 Q5D0E6.S209.p_DALRD3 Q5D0E6_S209s _1_1_209_209 Q5D0E6 Q5D0E6|Q5D0E6-2|C9JJG6|Q5D0E6-4 DALR anticodon-binding domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19889.19889.2 10.04 3.04 2.466 2 1 1 0 611.8414 1142.7095 S209s TMT10 207 (R) TLsPGILGR (L) T(0.0)LS(0.99)PGILGR s:Phosphorylated S DALRD3 60217.5 1 1 6044.1 14.46 HUMAN 1 0.048 -19.3932 ANEAGDSSQDEAEDD-p Q9NVU0;S162-p ANEAGDSSQDEAEDD 0.526493980821254 0.593723253161795 0.126666666666667 0.059 5.15476566489967 3.06404026553786 0.126666666666667 0.059 0.305157068028431 0.493851040864988 1.1323455546978 0.733285663089972 Q9NVU0 POLR3E Q9NVU0.S162.p_POLR3E Q9NVU0_S161sS162s_2_2_161_162 Q9NVU0 Q9NVU0|Q9NVU0-4|Q9NVU0-5|A0A0C4DH01|Q9NVU0-2|Q9NVU0-3 DNA-directed RNA polymerase III subunit RPC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.9674.10285.3 17.72 17.72 99 2 2 2 0 866.6893 2438.1207 S161s S162s TMT10 153 (R) EAANEAGDssQDEAEDDVK (Q) EAANEAGDS(1.0)S(1.0)QDEAEDDVK K:TMT10,s:Phosphorylated S POLR3E 80581.3 9 4 2480.1 81.72 HUMAN 1 5.1548 3.064 ANEGKLLSPLQDVDI-p Q9UGL1-2;S1205-p ANEGKLLSPLQDVDI 0.19531414741951 0.0493623456367947 -0.216333333333333 -0.269 13.8326067106129 17.4772082981402 -0.216333333333333 -0.269 0.0413751259611759 0.0178763632165878 -2.66223595060069 -3.35457787485589 Q9UGL1 KDM5B Q9UGL1.2.S1205.p_KDM5B Q9UGL1-2_S1205s _1_1_1205_1205 Q9UGL1-2 Q9UGL1-2 Isoform 2 of Lysine-specific demethylase 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30547.30547.3 10.77 10.77 99 1 1 1 0 593.6738 1699.0406 S1205s TMT10 1203 (K) LLsPLQDVDIK (I) LLS(1.0)PLQDVDIK K:TMT10,s:Phosphorylated S KDM5B 182657.7 2 1 3314.1 54.16 HUMAN 1 -13.8326 -17.4772 ANFHRKASVIMVDEL-p Q9HC58;S308-p ANFHRKASVIMVDEL 0.406668327002541 0.0608614741846236 0.110666666666667 0.233333333333333 7.21654937013062 16.1958489246143 0.110666666666667 0.233333333333333 0.189821352287804 0.0240112686865967 1.49886833467273 3.10365981720917 Q9HC58 SLC24A3 Q9HC58.S308.p_SLC24A3 Q9HC58_S308s _1_1_308_308 Q9HC58 Q9HC58 Sodium/potassium/calcium exchanger 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33045.33045.4 24.82 24.82 9.304 5 1 1 0 850.7 3319.8125 S308s TMT10 306 (R) KAsVIMVDELLSAYPHQLSFSEAGLR (I) KAS(0.99)VIMVDELLS(0.0)AY(0.0)PHQLS(0.0)FS(0.0)EAGLR K:TMT10,s:Phosphorylated S SLC24A3 72960.8 3 2 3855.1 41.64 HUMAN 1 7.2165 16.1958 ANFSAYPSEEDMIEW-p P42566;S851-p ANFSAYPSEEDMIEW 0.563857690184248 0.529642852102041 -0.09 -0.0836666666666667 4.58332856727456 3.71150270577264 -0.09 -0.0836666666666667 0.34807044082404 0.425451176964235 -1.02711559514126 -0.861426762933812 P42566 EPS15 P42566.S851.p_EPS15 P42566_S851s _1_1_851_851 P42566 P42566|B1AUU8|P42566-2 Epidermal growth factor receptor substrate 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.28264.28264.3 23.92 19.15 2.169 4 1 1 0 1148.1921 3362.604 S851s TMT10 837 (K) EADPSNFANFSAYPsEEDMIEWAKR (E) EADPS(0.0)NFANFS(0.0)AY(0.0)PS(0.99)EEDMIEWAKR K:TMT10,s:Phosphorylated S EPS15 99281.5 12 17 342.1 353.17 HUMAN 1 -4.5833 -3.7115 ANFSTNNSNPGARPP-p C9J1X3;S960-p ANFSTNNSNPGARPP 0.846016799825059 0.0446267912162327 0.0406666666666667 -0.261 1.40493447056533 18.0766967743584 0.0406666666666667 -0.261 0.723613320589385 0.0155714954273013 0.37257931443586 -3.47494374328726 C9J1X3 TNK2 C9J1X3.S960.p_TNK2 C9J1X3_S960s _1_1_960_960 C9J1X3 Q07912-3|C9J1X3 Activated CDC42 kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7442.7442.3 14.59 14.59 3.403 3 1 1 0 735.0239 2123.0944 S960s TMT10 953 (K) ANFSTNNsNPGARPPPPR (A) ANFS(0.0)T(0.0)NNS(0.99)NPGARPPPPR s:Phosphorylated S TNK2 115861.1 1 4 2506.1 80.69 HUMAN 1 1.4049 -18.0767 ANGEQKDSDTEKQGP-p Q6UB99;S73-p ANGEQKDSDTEKQGP 0.911605742223265 0.0143328594924759 -0.023 -0.390666666666667 0.787013583390962 25.5648316867129 -0.023 -0.390666666666667 0.834254660834847 0.00277662245359671 -0.219565263307233 -5.18160991180727 Q6UB99 ANKRD11 Q6UB99.S73.p_ANKRD11 Q6UB99_S73s _1_1_73_73 Q6UB99 Q6UB99|A0A087WTN8 Ankyrin repeat domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18261.18261.4 14.39 14.39 1.434 3 1 1 0 669.5943 2595.3869 S73s TMT10 60 (K) LPFTAGANGEQKDsDTEK (Q) LPFT(0.0)AGANGEQKDS(0.99)DT(0.0)EK K:TMT10,s:Phosphorylated S ANKRD11 299790.8 8 3 340.1 353.72 HUMAN 1 -0.787 -25.5648 ANGGKSLSMVDLQDA-p Q5VWQ8;S747-p ANGGKSLSMVDLQDA 0.899476447657811 0.454936873030713 -0.0213333333333333 -0.082 0.900160406006684 4.56003046110356 -0.0213333333333333 -0.082 0.812800494946968 0.349942712546655 -0.248643744801401 -1.02258507709362 Q5VWQ8 DAB2IP Q5VWQ8.S747.p_DAB2IP Q5VWQ8_S747s _1_1_747_747 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20268.20474.2 14.51 8.13 2.879 2 1 1 0 772.3739 1463.7725 S747s TMT10 745 (K) SLsMVDLQDAR (T) S(0.0)LS(0.99)MVDLQDAR s:Phosphorylated S DAB2IP 132592.9 6 11 281.1 388.28 HUMAN 1 -0.9002 -4.56 ANGLRAESLDDQMLS-p Q6ZV73;S721-p ANGLRAESLDDQMLS 0.299327491242072 0.0373242977169981 0.187 -0.454333333333333 9.85042285804204 19.1890731681847 0.187 -0.454333333333333 0.103504138324801 0.0120529313563417 1.95573514001327 -3.70374965947402 Q6ZV73 FGD6 Q6ZV73.S721.p_FGD6 Q6ZV73_S721s _1_1_721_721 Q6ZV73 Q6ZV73|Q6ZV73-2|F8VY01 FYVE, RhoGEF and PH domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15425.15425.3 17.9 13.81 2.917 4 1 1 0 843.7401 2449.2303 S721s TMT10 709 (R) GQTSAANGLRAEsLDDQMLSR (E) GQT(0.0)S(0.0)AANGLRAES(0.99)LDDQMLS(0.0)R s:Phosphorylated S FGD6 162696.3 2 11 630.1 257.05 HUMAN 1 9.8504 -19.1891 ANIENTESFTLLIIP-p A0A0A0MTS7;S23396-p ANIENTESFTLLIIP 0.421883877305009 0.568662466865634 0.124666666666667 0.105333333333333 6.90272389100414 3.30303556616604 0.124666666666667 0.105333333333333 0.204045777000888 0.467408325051956 1.44397457102118 0.781201774393761 A0A0A0MTS7 TTN A0A0A0MTS7.S23396.p_TTN A0A0A0MTS7_T23394tS23396sT23398t_3_3_23394_23398 A0A0A0MTS7 Q8WZ42-12|A0A0A0MTS7 Titin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32626.32626.3 9.29 3.04 8.408 5 3 3 0 1090.4771 3027.5295 N23390n N23393n T23394t S23396s T23398t Hydrogen 23389 (R) AnIEntEsFtLLIIPECNRYDTGK (F) AN(0.99)IEN(0.99)T(0.99)ES(0.99)FT(0.99)LLIIPECN(0.0)RY(0.0)DT(0.0)GK C:Carbamidomethylation,K:TMT10-Lys-Only,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S TTN 4024362.5 1 19 1796.1 114.24 HUMAN 1 6.9027 3.303 ANITRQNSSSSDSGG-p Q12929;S659-p ANITRQNSSSSDSGG 0.979213683234262 0.153166796080988 -0.00400000000000001 0.178333333333333 0.179215303162368 10.715840229872 -0.00400000000000001 0.178333333333333 0.959573994680712 0.0848039296351402 -0.0530782890904526 2.10547709406948 Q12929 EPS8 Q12929.S659.p_EPS8 Q12929_S659s _1_1_659_659 Q12929 Q12929|Q12929-2 Epidermal growth factor receptor kinase substrate 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6088.6253.2 11.81 5.72 1.121 6 1 1 0 845.3855 1609.7979 S659s TMT10 657 (R) QNsSSSDSGGSIVR (D) QNS(0.99)S(0.0)S(0.0)S(0.0)DS(0.0)GGS(0.0)IVR s:Phosphorylated S EPS8 92222.2 5 5 994.1 191.04 HUMAN 1 -0.1792 10.7158 ANKESIGSELGNSFA-p Q5VZL5;S237-p ANKESIGSELGNSFA 0.199032885103621 0.353981364800064 0.220333333333333 0.093 13.6473162815139 5.98048643751906 0.220333333333333 0.093 0.0431785816024656 0.252319814236776 2.62839023142996 1.2807828482136 Q5VZL5 ZMYM4 Q5VZL5.S237.p_ZMYM4 Q5VZL5_S237s _1_1_237_237 Q5VZL5 Q5VZL5|Q5VZL5-4|Q5VZL5-2 Zinc finger MYM-type protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24444.24444.3 10.11 10.11 4.333 4 1 1 0 663.9866 1909.9817 S237s TMT10 233 (K) ESIGsELGNSFASNIR (I) ES(0.0)IGS(0.99)ELGNS(0.0)FAS(0.0)NIR s:Phosphorylated S ZMYM4 176265.3 1 6 535.1 278.69 HUMAN 1 13.6473 5.9805 ANKIKLMSDVEDVSL-p Q9NSI6-2;S1943-p ANKIKLMSDVEDVSL 0.88602112979402 0.17564180594191 0.0283333333333333 -0.167 1.03180894252311 9.93311767848617 0.0283333333333333 -0.167 0.788531606545644 0.101551941818259 0.281838443239076 -1.96930264059826 Q9NSI6 BRWD1 Q9NSI6.2.S1943.p_BRWD1 Q9NSI6-2_S1943s _1_1_1943_1943 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23635.23635.3 20.76 20.76 9.78 3 1 1 0 718.3433 2073.0484 S1943s TMT10 1941 (K) LMsDVEDVSLENVHTR (S) LMS(0.99)DVEDVS(0.0)LENVHT(0.0)R s:Phosphorylated S BRWD1 259915.1 5 19 208.1 444.81 HUMAN 1 1.0318 -9.9331 ANKRPMSSPEMKSAP-p P51610;S2020-p ANKRPMSSPEMKSAP 0.295125154480667 0.0369344746865729 -0.353666666666667 -0.397333333333333 9.98941140299695 19.258552706693 -0.353666666666667 -0.397333333333333 0.10024410891798 0.0118616397335005 -1.97987090624947 -3.71828769757303 P51610 HCFC1 P51610.S2020.p_HCFC1 P51610_S2020s _1_1_2020_2020 P51610 A6NEM2|P51610-4|P51610-2 Host cell factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8482.8482.4 7.16 4.89 1.161 2 1 1 0 560.8039 2160.2236 S2020s TMT10 2012 (K) PANKRPMSsPEMK (S) PANKRPMS(0.0)S(0.99)PEMK K:TMT10,s:Phosphorylated S HCFC1 210725.7 2 16 625.1 258.74 HUMAN 1 -9.9894 -19.2586 ANKSLLKSVEEELHQ-p Q8IVH8;S398-p ANKSLLKSVEEELHQ 0.495901315517715 0.740657160494163 -0.0946666666666667 0.0443333333333334 5.60792627049837 1.79751919783549 -0.0946666666666667 0.0443333333333334 0.274920656900904 0.661070960968759 -1.21438969930623 0.463427312715618 Q8IVH8 MAP4K3 Q8IVH8.S398.p_MAP4K3 Q8IVH8_S398s _1_1_398_398 Q8IVH8 Q8IVH8|Q8IVH8-2|Q8IVH8-3|F5H5A3 Mitogen-activated protein kinase kinase kinase kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7796.7796.3 18.93 18.93 99 1 1 1 0 479.2313 1355.7117 S398s TMT10 398 (K) sVEEELHQR (G) S(1.0)VEEELHQR s:Phosphorylated S MAP4K3 102512.2 4 1 3600.1 47.43 HUMAN 1 -5.6079 1.7975 ANLLSGKSPRKSAEP-p E7ETY2;S156-p ANLLSGKSPRKSAEP 0.567979516526294 0.000952253650599092 0.124 -1.40133333333333 4.52193860624989 53.1985850640708 0.124 -1.40133333333333 0.353025550863568 4.78786055908619e-06 1.01567351013641 -18.0158940249027 E7ETY2 TCOF1 E7ETY2.S156.p_TCOF1 E7ETY2_S156s _1_1_156_156 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2|Q13428-5 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17694.17694.3 13.87 9.92 1.438 3 1 1 0 594.3414 1701.0423 S156s TMT10 147 (K) TVANLLSGKsPR (K) T(0.0)VANLLS(0.0)GKS(0.99)PR K:TMT10,s:Phosphorylated S TCOF1 152529.5 19 3 19.1 1034.65 HUMAN 1 4.5219 -53.1986 ANLNRSTSVPENPKS-p P04150-3;S134-p ANLNRSTSVPENPKS 0.498868510893363 0.00523431418338831 0.0916666666666667 0.520666666666667 5.56351597774383 33.1787684127043 0.0916666666666667 0.520666666666667 0.277746376764796 0.000480975725869632 1.20639666494875 7.44720265984122 P04150 NR3C1 P04150.3.S134.p_NR3C1 P04150-3_S134s _1_1_134_134 P04150-3 P04150-3|P04150-8|P04150-10|P04150-6|P04150-2|P04150-9|P04150-11|P04150-12|P04150-13|P04150-5|P04150-7 Isoform Alpha-2 of Glucocorticoid receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8571.8571.2 7.58 4.3 1.138 3 1 1 0 748.8921 1416.8099 S134s TMT10 132 (R) STsVPENPK (S) S(0.0)T(0.0)S(0.99)VPENPK K:TMT10,s:Phosphorylated S NR3C1 86955.1 1 2 2865.1 67.86 HUMAN 1 5.5635 33.1788 ANMHISESQQEFFRM-p Q9H246;S95-p ANMHISESQQEFFRM 0.181669895600714 0.130025143919627 0.21 0.161 14.5884353913373 11.6761518651153 0.21 0.161 0.03476613889263 0.0679805718433165 2.80161236538183 2.2739224192926 Q9H246 C1orf21 Q9H246.S95.p_C1orf21 Q9H246_S95s _1_1_95_95 Q9H246 Q9H246 Uncharacterized protein C1orf21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16511.16511.3 19.88 19.88 1.128 2 1 1 0 678.3106 1952.9486 S95s TMT10 88 (R) ANMHISEsQQEFFR (M) ANMHIS(0.0)ES(0.99)QQEFFR s:Phosphorylated S C1orf21 13979.2 2 1 4600.1 28.98 HUMAN 1 14.5884 11.6762 ANMIKGKTPEEIRKT-p E5RJR5;T131-p ANMIKGKTPEEIRKT 0.0745793811074775 0.0424025690630897 0.388 0.276666666666667 24.1584405842938 18.3873595946407 0.388 0.276666666666667 0.00383845047506583 0.0144965293958667 4.83374496268862 3.53811255432719 E5RJR5 NotFound E5RJR5.T131.p_NotFound E5RJR5_T131t _1_1_131_131 E5RJR5 P63208|E5RJR5|P63208-2 S-phase kinase-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7612.7612.4 7.91 7.91 99 1 1 1 0 457.0192 1745.0888 T131t TMT10 129 (K) GKtPEEIRK (T) GKT(1.0)PEEIRK K:TMT10,t:Phosphorylated T SKP1 18890.9 15 1 5947.1 15.09 HUMAN 1 24.1584 18.3874 ANMSRAHSDSNLSAS-p Q6PEV8;S316-p ANMSRAHSDSNLSAS 0.862029975440239 0.441142651958517 0.03 0.1 1.26034643777661 4.73254885111183 0.03 0.1 0.748109821226391 0.336314130476844 0.337966327380788 1.05460666294239 Q6PEV8 FAM199X Q6PEV8.S316.p_FAM199X Q6PEV8_S316s _1_1_316_316 Q6PEV8 Q6PEV8 Protein FAM199X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4997.4997.2 8.78 4.03 3.167 4 1 1 0 862.8948 1644.8139 S316s TMT10 314 (R) AHsDSNLSASAAER (I) AHS(0.99)DS(0.0)NLS(0.0)AS(0.0)AAER s:Phosphorylated S FAM199X 43371 1 1 6898.1 8.78 HUMAN 1 1.2603 4.7325 ANNAKAMSARAEAIK-p P47914;S66-p ANNAKAMSARAEAIK 0.993752696482329 0.876279280223965 0.00166666666666666 0.0433333333333333 0.0557382151272415 0.80706149253221 0.00166666666666666 0.0433333333333333 0.987247808790365 0.830412448110743 0.0167349108061084 0.224734493546086 P47914 RPL29 P47914.S66.p_RPL29 P47914_S66s _1_1_66_66 P47914 P47914 60S ribosomal protein L29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10046.10046.3 7.87 7.87 99 1 1 1 0 529.2894 1505.8874 S66s TMT10 64 (K) AMsARAEAIK (A) AMS(1.0)ARAEAIK K:TMT10,s:Phosphorylated S RPL29 17808.8 1 2 2966.1 64.48 HUMAN 1 0.0557 0.8071 ANNSQEPSPQLASSV-p Q96HC4;S313-p ANNSQEPSPQLASSV 0.813083216141779 0.256050539133373 0.0376666666666667 -0.118333333333333 1.7254807653784 7.79257565953042 0.0376666666666667 -0.118333333333333 0.672127900219899 0.166242642682581 0.447111430912467 -1.59866323158385 Q96HC4 PDLIM5 Q96HC4.S313.p_PDLIM5 Q96HC4_S313s _1_1_313_313 Q96HC4 Q96HC4|Q96HC4-4|Q96HC4-7 PDZ and LIM domain protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10778.10778.3 17.06 13.16 6.26 6 1 1 0 870.7809 2530.3626 S313s TMT10 305 (K) KANNSQEPsPQLASSVASTR (S) KANNS(0.0)QEPS(0.99)PQLAS(0.0)S(0.0)VAS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S PDLIM5 65142.1 6 5 2505.1 80.72 HUMAN 1 1.7255 -7.7926 ANPFGGASHAKGIVL-p P62266;S45-p ANPFGGASHAKGIVL 0.692883025938958 0.0665752188304774 -0.112 -0.283666666666667 2.98982130677452 15.6495794698315 -0.112 -0.283666666666667 0.502363259152813 0.0272296496177923 -0.718344132341434 -2.99912947251284 P62266 RPS23 P62266.S45.p_RPS23 P62266_S45s _1_1_45_45 P62266 P62266|D6RD47|D6R9I7|D6RIX0|D6RDJ2 40S ribosomal protein S23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10802.10802.3 12.26 12.26 99 1 1 1 0 532.2769 1514.848 S45s TMT10 38 (K) ANPFGGAsHAK (G) ANPFGGAS(1.0)HAK K:TMT10,s:Phosphorylated S RPS23 15978.4 1 1 4922.1 25.03 HUMAN 1 -2.9898 -15.6496 ANQPARDSQPRVLPS-p Q96T23;S1325-p ANQPARDSQPRVLPS 0.821244772991101 0.0260966993887235 0.0453333333333333 0.702666666666667 1.6452052617861 21.5284327443701 0.0453333333333333 0.702666666666667 0.684667122717355 0.00703326086151622 0.42871331944731 4.21058889421535 Q96T23 RSF1 Q96T23.S1325.p_RSF1 Q96T23_S1325s _1_1_1325_1325 Q96T23 Q96T23|Q96T23-2 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5530.5530.4 25.08 25.08 5.448 3 1 1 0 813.3439 3170.3878 S1325s TMT10 1303 (R) IETDEEESCDNAHGDANQPARDsQPR (V) IET(0.0)DEEES(0.0)CDNAHGDANQPARDS(0.99)QPR C:Carbamidomethylation,s:Phosphorylated S RSF1 165358.1 1 21 39.1 857.38 HUMAN 1 1.6452 21.5284 ANQVLKFTKGKSFRH-p Q14978-3;T666-p ANQVLKFTKGKSFRH 0.864060337350493 0.173387296751856 -0.0476666666666667 -0.167666666666667 1.23746448588121 10.0058233164419 -0.0476666666666667 -0.167666666666667 0.75206183739848 0.0998660030398972 -0.33242715900682 -1.98192018728607 Q14978 NOLC1 Q14978.3.T666.p_NOLC1 Q14978-3_T666t _1_1_666_666 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16935.16935.3 10.75 5.57 99 1 1 1 0 606.0287 1736.1038 T666t TMT10 659 (R) ANQVLKFtK (G) ANQVLKFT(1.0)K K:TMT10,t:Phosphorylated T NOLC1 73744 1 22 72.1 655.55 HUMAN 1 -1.2375 -10.0058 ANQYRSKSPAPVEKA-p Q9ULD9;S1430-p ANQYRSKSPAPVEKA 0.234288146531526 0.0970339410401999 0.174 0.269 12.0825463546208 13.3946664429848 0.174 0.269 0.0619077990949787 0.0457649883034261 2.34698459111117 2.58096508680425 Q9ULD9 ZNF608 Q9ULD9.S1430.p_ZNF608 Q9ULD9_S1430s _1_1_1430_1430 Q9ULD9 Q9ULD9|Q9ULD9-2 Zinc finger protein 608 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8020.8020.3 9.84 9.84 1.424 2 1 1 0 570.665 1630.0143 S1430s TMT10 1428 (R) SKsPAPVEK (A) S(0.0)KS(0.99)PAPVEK K:TMT10,s:Phosphorylated S ZNF608 163232.5 4 9 1226.1 164.42 HUMAN 1 12.0825 13.3947 ANRDIYLSPDRTGSS-p Q15696;S349-p ANRDIYLSPDRTGSS 0.931074993503674 0.101868735170688 0.0133333333333333 0.184333333333333 0.614427715784784 13.1045134251319 0.0133333333333333 0.184333333333333 0.868074958866903 0.0489270078906699 0.174153524732289 2.52851619368455 Q15696 ZRSR2 Q15696.S349.p_ZRSR2 Q15696_S349s _1_1_349_349 Q15696 Q15696 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21377.21377.5 22.32 15 2.644 5 1 1 0 711.3413 3472.7286 S349s TMT10 334 (R) NPNNEFWEANRDIYLsPDRTGSSFGK (N) NPNNEFWEANRDIY(0.0)LS(0.99)PDRT(0.0)GS(0.0)S(0.0)FGK K:TMT10,s:Phosphorylated S ZRSR2 58671.2 13 2 2429.1 83.76 HUMAN 1 0.6144 13.1045 ANRDQDSSDDERALE-p Q5TAQ9;S130-p ANRDQDSSDDERALE 0.666610889058688 0.0727841803049565 0.0623333333333333 0.216333333333333 3.29236439008054 15.1198861423551 0.0623333333333333 0.216333333333333 0.468558219789421 0.0307617746087935 0.779194203621391 2.89905597732474 Q5TAQ9 DCAF8 Q5TAQ9.S130.p_DCAF8 Q5TAQ9_S129sS130s_2_2_129_130 Q5TAQ9 G3V3G9|Q5TAQ9|V9GY54|Q5TAQ9-2 DDB1- and CUL4-associated factor 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25910.25910.4 22.4 20.97 21.299 6 2 2 0 866.3729 3302.5268 S129s S130s Hydrogen 123 (R) ANRDQDssDDERALEDWVSSETSALPRPR (W) ANRDQDS(0.99)S(0.99)DDERALEDWVS(0.0)S(0.0)ET(0.0)S(0.0)ALPRPR s:Phosphorylated S DCAF8 67535.7 16 3 1532.1 133.65 HUMAN 1 3.2924 15.1199 ANRFSACSLQEEKLI-p Q9BYI3;S485-p ANRFSACSLQEEKLI 0.844490429219358 0.997027909793755 0.0383333333333333 0.001 1.41927013697443 0.0185333273542521 0.0383333333333333 0.000999999999999941 0.721228676650514 0.995741636324047 0.37597572292359 0.00558753673606262 Q9BYI3 FAM126A Q9BYI3.S485.p_FAM126A Q9BYI3_S485s _1_1_485_485 Q9BYI3 Q9BYI3|Q9BYI3-2 Hyccin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16326.16326.2 11.69 11.69 3.677 2 1 1 0 868.9211 1656.8667 S485s TMT10 481 (R) FSACsLQEEK (L) FS(0.0)ACS(0.99)LQEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM126A 58366.1 3 6 2241.1 92.02 HUMAN 1 1.4193 0.0185 ANRLGANSLLDLVVF-p P31040;S456-p ANRLGANSLLDLVVF 0.0782221681558717 0.169214323928998 0.349 0.304666666666667 23.6254806505542 10.1452340946065 0.349 0.304666666666667 0.00433962232702801 0.0967111595729724 4.70386678217783 2.00612968833218 P31040 SDHA P31040.S456.p_SDHA P31040_S456s _1_1_456_456 P31040 P31040|P31040-2|D6RFM5|P31040-3|A0A087X1I3 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.37345.37345.2 20.11 20.11 99 1 1 1 0 891.9893 1703.0053 S456s TMT10 452 (R) LGANsLLDLVVFGR (A) LGANS(1.0)LLDLVVFGR s:Phosphorylated S SDHA 73717.2 3 1 4860.1 25.76 HUMAN 1 23.6255 10.1452 ANRRNRLSFNSEGVR-p Q15911;S571-p ANRRNRLSFNSEGVR 0.89825440876323 0.232358066884507 -0.04 -0.22 0.913713459100335 8.34825135835382 -0.04 -0.22 0.810267937465434 0.14627660234558 -0.252092072654235 -1.6949634263602 Q15911 ZFHX3 Q15911.S571.p_ZFHX3 Q15911_S571s _1_1_571_571 Q15911 Q15911 Zinc finger homeobox protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10156.10156.3 10.27 10.27 3.49 2 1 1 0 529.9326 1507.8179 S571s TMT10 568 (R) NRLsFNSEGVR (A) NRLS(0.99)FNS(0.0)EGVR s:Phosphorylated S ZFHX3 409090.1 1 3 529.1 281.73 HUMAN 1 -0.9137 -8.3483 ANRTPPKSPGDPSKD-p O94811;S18-p ANRTPPKSPGDPSKD 0.749606799179044 0.0430249644500856 0.11 0.303 2.3810441691777 18.3061387365331 0.11 0.303 0.577957073151985 0.0147701915081259 0.591625970311711 3.52154396801972 O94811 TPPP O94811.S18.p_TPPP O94811_T14tS18s_2_2_14_18 O94811 O94811 Tubulin polymerization-promoting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6356.6356.4 7.5 7.5 1.191 3 2 2 0 593.3112 2210.286 T14t S18s TMT10 10 (K) AANRtPPKsPGDPSK (D) AANRT(0.99)PPKS(0.99)PGDPS(0.0)K K:TMT10,t:Phosphorylated T,s:Phosphorylated S TPPP 23864.4 1 3 4652.1 28.33 HUMAN 1 2.381 18.3061 ANRYSTVSLQEDRLG-p Q8IXS8;S491-p ANRYSTVSLQEDRLG 0.233628206047255 0.749705752304287 0.215333333333333 -0.0376666666666666 12.1097955491938 1.72921870949656 0.215333333333333 -0.0376666666666667 0.0615205833788891 0.671549653027486 2.35182449473869 -0.44791446826192 Q8IXS8 FAM126B Q8IXS8.S491.p_FAM126B Q8IXS8_S491s _1_1_491_491 Q8IXS8 Q8IXS8 Protein FAM126B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15098.15098.4 11.24 11.24 2.348 4 1 1 0 619.819 2396.2822 S491s TMT10 487 (R) YSTVsLQEDRLGQAGEGK (E) Y(0.0)S(0.0)T(0.0)VS(0.99)LQEDRLGQAGEGK K:TMT10,s:Phosphorylated S FAM126B 59101.9 3 10 955.1 195.77 HUMAN 1 12.1098 -1.7292 ANSKSEGSPVLPHEP-p Q9UKE5;S769-p ANSKSEGSPVLPHEP 0.577114205340763 0.537570777476765 0.08 0.0723333333333333 4.39272992286261 3.62587869674818 0.08 0.0723333333333334 0.363686355394324 0.433922460357873 0.991494509508174 0.844770970086494 Q9UKE5 TNIK Q9UKE5.S769.p_TNIK Q9UKE5_S769s _1_1_769_769 Q9UKE5 Q9UKE5|Q9UKE5-4|Q9UKE5-2|Q9UKE5-6|Q9UKE5-3|Q9UKE5-7|Q9UKE5-5|Q9UKE5-8 TRAF2 and NCK-interacting protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11477.11477.2 16.07 16.07 3.314 2 1 1 0 943.494 1806.0162 S769s TMT10 766 (K) SEGsPVLPHEPAK (V) S(0.0)EGS(0.99)PVLPHEPAK K:TMT10,s:Phosphorylated S TNIK 155453.9 11 40 131.1 535.29 HUMAN 1 4.3927 3.6259 ANSQVMGSANSTLRA-p A0A0C4DFY5;S448-p ANSQVMGSANSTLRA 0.28377835512685 0.417873405866831 -0.181333333333333 -0.221 10.3257821494768 5.04201366513827 -0.181333333333333 -0.221 0.0927730394016828 0.313183327073776 -2.03837116953348 -1.11152553903046 A0A0C4DFY5 GPRC5C A0A0C4DFY5.S448.p_GPRC5C A0A0C4DFY5_S448s _1_1_448_448 A0A0C4DFY5 A0A0C4DFY5|Q9NQ84-2|J9JIE0 G-protein-coupled receptor family C group 5 member C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10266.10266.2 14.19 14.19 1.154 5 1 1 0 958.9613 1836.9435 S448s TMT10 439 (R) ATANSQVMGsANSTLR (A) AT(0.0)ANS(0.0)QVMGS(0.99)ANS(0.0)T(0.0)LR s:Phosphorylated S GPRC5C 53504 1 7 1470.1 139.57 HUMAN 1 -10.3258 -5.042 ANSVKKASDDLEHEN-p Q15147-5;S539-p ANSVKKASDDLEHEN 0.0613809554565416 0.783244092561899 -0.544333333333333 0.033 26.4273885583983 1.46930216460653 -0.544333333333333 0.033 0.00227646587337293 0.712967582363245 -5.4146138565813 0.387740004900893 Q15147 PLCB4 Q15147.5.S539.p_PLCB4 Q15147-5_S539s _1_1_539_539 Q15147-5 Q15147-5 Isoform 4 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6177.6177.4 13.33 13.33 99 1 1 1 0 631.845 2444.3915 S539s TMT10 537 (K) KAsDDLEHENNKK (G) KAS(1.0)DDLEHENNKK K:TMT10,s:Phosphorylated S PLCB4 136983.7 1 5 1968.1 104.91 HUMAN 1 -26.4274 1.4693 ANTTAFLTPLEIKAK-p Q9Y5K6;T565-p ANTTAFLTPLEIKAK 0.687251281626319 0.0225932956016092 -0.0593333333333333 -0.615666666666667 3.05778902270501 22.4817078505991 -0.0593333333333334 -0.615666666666667 0.494562402814812 0.00564714858642743 -0.732125655580226 -4.42814610181496 Q9Y5K6 CD2AP Q9Y5K6.T565.p_CD2AP Q9Y5K6_T565t _1_1_565_565 Q9Y5K6 Q9Y5K6 CD2-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27353.27353.3 17.06 17.06 6.859 3 1 1 0 653.0317 1877.1148 T565t TMT10 558 (K) ANTTAFLtPLEIK (A) ANT(0.0)T(0.0)AFLT(0.99)PLEIK K:TMT10,t:Phosphorylated T CD2AP 71678 2 11 413.1 321.76 HUMAN 1 -3.0578 -22.4817 ANVEPNQTVEINEQE-p Q9BU64;T85-p ANVEPNQTVEINEQE 0.132806138816352 0.232639531751691 0.378666666666667 -0.213666666666667 18.0948409835539 8.3421325434467 0.378666666666667 -0.213666666666667 0.0155065756291063 0.146482838045823 3.48148473973131 -1.69390428515232 Q9BU64 CENPO Q9BU64.T85.p_CENPO Q9BU64_T85t _1_1_85_85 Q9BU64 Q9BU64|Q9BU64-2 Centromere protein O HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28620.28620.4 18.36 18.36 99 1 1 1 0 995.5153 3899.0675 T85t TMT10 75 (K) ACIANVEPNQtVEINEQEALEEKLENVK (A) ACIANVEPNQT(1.0)VEINEQEALEEKLENVK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CENPO 34241.5 1 2 3208.1 57.38 HUMAN 1 18.0948 -8.3421 ANVFRSPSPPRAGPF-p Q8TEW8;S973-p ANVFRSPSPPRAGPF 0.864679832642579 0.139219549693382 0.026 0.189 1.22870866354891 11.282362030743 0.026 0.189 0.753579600691819 0.0744327040936425 0.330303007122245 2.20462911648162 Q8TEW8 PARD3B Q8TEW8.S973.p_PARD3B Q8TEW8_S973s _1_1_973_973 Q8TEW8 Q8TEW8|Q8TEW8-2|Q8TEW8-3|Q8TEW8-6|A0A087X1S9|A0A087WYL6 Partitioning defective 3 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13481.13895.3 13.14 9.41 1.575 3 1 1 0 598.9681 1714.9227 S973s TMT10 971 (R) SPsPPRAGPFGYPR (D) S(0.0)PS(0.99)PPRAGPFGY(0.0)PR s:Phosphorylated S PARD3B 133176.7 2 43 65.4 692.2 HUMAN 1 1.2287 11.2824 ANVFYAMSPVAPRDF-p A0A0A0MRX4;S686-p ANVFYAMSPVAPRDF 0.148303739525478 0.5514198408108 -0.237 0.0596666666666667 16.7293153389623 3.48128762266176 -0.237 0.0596666666666667 0.0212357921581603 0.448612362895266 -3.20950958707714 0.816455468598229 A0A0A0MRX4 RGL3 A0A0A0MRX4.S686.p_RGL3 A0A0A0MRX4_S686s _1_1_686_686 A0A0A0MRX4 A0A0A0MRX4 Ral guanine nucleotide dissociation stimulator-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.35390.35390.3 16.24 16.24 2.638 2 1 1 0 832.7684 2416.326 S686s TMT10 672 (R) VLLIPDNANVFYAMsPVAPR (D) VLLIPDNANVFY(0.0)AMS(0.99)PVAPR s:Phosphorylated S RGL3 78574.5 1 6 1395.1 146.85 HUMAN 1 -16.7293 3.4813 ANVVINQSANDSKVL-p A0A0A0MTH9;S257-p ANVVINQSANDSKVL 0.378389324662461 0.0448368954265892 -0.118666666666667 -0.281 7.79639747658626 18.0461411991448 -0.118666666666667 -0.281 0.166096412527642 0.0156814378111888 -1.59981998081873 -3.46876042798186 A0A0A0MTH9 NotFound A0A0A0MTH9.S257.p_NotFound A0A0A0MTH9_S257s _1_1_257_257 A0A0A0MTH9 O14981|A0A0A0MTH9 TATA-binding protein-associated factor 172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18471.18471.3 15.28 15.44 5.209 2 1 1 0 671.0273 1931.0962 S257s TMT10 249 (K) IANVVINQsANDSK (V) IANVVINQS(0.99)ANDS(0.0)K K:TMT10,s:Phosphorylated S BTAF1 209212 2 4 2247.1 91.7 HUMAN 1 -7.7964 -18.0461 ANYVKLLSPGTSKIT-p Q15811;S1137-p ANYVKLLSPGTSKIT 0.535681624329216 0.941916792181651 -0.083 -0.0146666666666667 5.01771741319725 0.371919020492842 -0.083 -0.0146666666666667 0.314940315835032 0.917926901765272 -1.10730393488901 -0.107937674813398 Q15811 ITSN1 Q15811.S1137.p_ITSN1 Q15811_S1137s _1_1_1137_1137 Q15811 Q15811|Q15811-8|Q15811-9|Q15811-4|Q15811-2|Q15811-7|Q15811-10|F8W7U0|Q15811-3|Q15811-11|Q15811-12 Intersectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16719.16719.2 9.89 4.25 1.651 3 1 1 0 670.8825 1260.7928 S1137s TMT10 1135 (K) LLsPGTSK (I) LLS(0.99)PGT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ITSN1 196273.9 2 8 790.1 224.94 HUMAN 1 -5.0177 -0.3719 APAAQGVSPSPSAIL-p A0A087X165;S396-p APAAQGVSPSPSAIL 0.872979718560793 0.11584079242375 0.0406666666666667 0.191666666666667 1.1546214251637 12.3473534631208 0.0406666666666667 0.191666666666667 0.766545357068486 0.0582458052379938 0.312226192909348 2.39286647124198 A0A087X165 NotFound A0A087X165.S396.p_NotFound A0A087X165_S396s _1_1_396_396 A0A087X165 A0A087X165|Q9C0H9-5 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22139.22139.3 21.09 21.09 2.689 3 1 1 0 729.7165 2107.1709 S396s TMT10 386 (R) LGGAPAAQGVsPSPSAILER (R) LGGAPAAQGVS(0.99)PS(0.0)PS(0.0)AILER s:Phosphorylated S SRCIN1 130745.5 1 10 98.1 603.22 HUMAN 1 1.1546 12.3474 APAARARTPLTAAQQ-p I3L2J0;T472-p APAARARTPLTAAQQ 0.218417073324327 0.00413791477536262 0.213333333333333 0.602333333333333 12.7338343765268 35.0780999107142 0.213333333333333 0.602333333333333 0.0532864223077784 0.000310591816652907 2.46321409596502 8.12300940409547 I3L2J0 NotFound I3L2J0.T472.p_NotFound I3L2J0_T472t _1_1_472_472 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7703.7703.3 12.63 12.63 4.121 2 1 1 0 574.9933 1643.0005 T472t TMT10 470 (R) ARtPLTAAQQK (Y) ART(0.99)PLT(0.0)AAQQK K:TMT10,t:Phosphorylated T CIC 259056.7 11 6 23.1 999.57 HUMAN 1 12.7338 35.0781 APADGKLSGSKAKTW-p Q9NZN4;S468-p APADGKLSGSKAKTW 0.0387399959516092 0.027590049228953 -0.612333333333333 -0.651333333333333 32.0625490400976 21.1418120602917 -0.612333333333333 -0.651333333333333 0.000621935140545862 0.00768809593471608 -7.08504546881048 -4.12425041851832 Q9NZN4 EHD2 Q9NZN4.S468.p_EHD2 Q9NZN4_S468s _1_1_468_468 Q9NZN4 Q9NZN4|Q9NZN4-2 EH domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24713.24713.3 16.46 16.46 1.15 5 1 1 0 1100.5997 3219.8071 S468s TMT10 451 (K) SKYDEIFYNLAPADGKLsGSK (A) S(0.0)KY(0.0)DEIFY(0.0)NLAPADGKLS(0.99)GS(0.0)K K:TMT10,s:Phosphorylated S EHD2 61331.4 6 11 1561.2 131.45 HUMAN 1 -32.0625 -21.1418 APAEDVDTPPRKKKR-p Q15910-2;T492-p APAEDVDTPPRKKKR 0.836405692955871 0.328751203387295 -0.0333333333333333 -0.127 1.49787180874405 6.39697994499402 -0.0333333333333333 -0.127 0.708292787006696 0.229246126095864 -0.394488990287472 -1.35464491775061 Q15910 EZH2 Q15910.2.T492.p_EZH2 Q15910-2_T492t _1_1_492_492 Q15910-2 Q15910-2|Q15910-4|Q15910-3|Q15910-5 Isoform 2 of Histone-lysine N-methyltransferase EZH2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17174.17174.3 23.65 23.65 23.652 3 1 1 0 877.465 2550.4179 T492t TMT10 476 (R) VKESSIIAPAPAEDVDtPPR (K) VKES(0.0)S(0.0)IIAPAPAEDVDT(0.99)PPR K:TMT10,t:Phosphorylated T EZH2 88013.3 15 5 1103.1 177.21 HUMAN 1 -1.4979 -6.397 APAGKEDSPSASGRV-p Q9P1Y6;S1371-p APAGKEDSPSASGRV 0.67111615565702 0.0035375820744429 -0.093 0.613333333333333 3.24412759024311 36.6031050611792 -0.093 0.613333333333334 0.473791473738224 0.00021861980061471 -0.769575805874538 8.70353200787836 Q9P1Y6 PHRF1 Q9P1Y6.S1371.p_PHRF1 Q9P1Y6_S1371s _1_1_1371_1371 Q9P1Y6 Q9P1Y6|Q9P1Y6-3|A0A0J9YWD5 PHD and RING finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9795.9795.3 20.05 19.43 1.993 5 1 1 0 907.7759 2641.347 S1371s TMT10 1355 (K) AEAPSSPDVAPAGKEDsPSASGR (V) AEAPS(0.0)S(0.0)PDVAPAGKEDS(0.99)PS(0.0)AS(0.0)GR K:TMT10,s:Phosphorylated S PHRF1 180374.6 1 17 438.1 312.23 HUMAN 1 -3.2441 36.6031 APAPAEKTPVKKKAR-p P10412;T18-p APAPAEKTPVKKKAR 0.318436709095685 0.000952253650599092 -0.144333333333333 -1.98933333333333 9.30243691760696 61.5108904012828 -0.144333333333333 -1.98933333333333 0.117423848015808 7.06172758135661e-07 -1.86072971984674 -25.7360500105367 P10412 HIST1H1E P10412.T18.p_HIST1H1E P10412_T18t _1_1_18_18 P10412 P10412 Histone H1.4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13385.13385.3 21.09 21.09 5.83 3 1 1 0 947.863 2761.6067 T18t Acetyl 2 (M) SETAPAAPAAPAPAEKtPVKK (K) S(0.0)ET(0.0)APAAPAAPAPAEKT(0.99)PVKK K:TMT10,t:Phosphorylated T HIST1H1E 21864.9 22 2 738.3 234.77 HUMAN 1 -9.3024 -61.5109 APAPARPSGPSKALK-p B0YIW6;S261-p APAPARPSGPSKALK 0.473396398746793 0.0421423977999033 0.142 -0.484 5.98185382708447 18.4274892248886 0.142 -0.484 0.252240383070601 0.0143631956897215 1.2813303031207 -3.54631287713192 B0YIW6 NotFound B0YIW6.S261.p_NotFound B0YIW6_S261s _1_1_261_261 B0YIW6 B0YIW6|P48444|P48444-2 Archain 1, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8183.8183.3 9.84 9.84 2.199 2 1 1 0 591.6655 1693.0161 S261s TMT10 253 (K) VAPAPARPsGPSK (A) VAPAPARPS(0.99)GPS(0.0)K K:TMT10,s:Phosphorylated S ARCN1 62195.8 2 3 1797.1 114.24 HUMAN 1 5.9819 -18.4275 APAPGIKSEVRKKLG-p Q96RQ3;S296-p APAPGIKSEVRKKLG 0.598806533260307 0.00428875799773063 0.0693333333333333 0.584 4.1150049717945 34.807631741269 0.0693333333333333 0.584 0.387703304668165 0.000330549744550216 0.939050040999781 8.02366369404495 Q96RQ3 MCCC1 Q96RQ3.S296.p_MCCC1 Q96RQ3_S296s _1_1_296_296 Q96RQ3 Q96RQ3|E9PHF7|F5GYT8|G5E9X5 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17413.17413.4 13.03 11 99 1 1 1 0 626.867 2424.4793 S296s TMT10 285 (K) IIEEAPAPGIKsEVRK (K) IIEEAPAPGIKS(1.0)EVRK K:TMT10,s:Phosphorylated S MCCC1 80985.1 2 2 3272.1 55.27 HUMAN 1 4.115 34.8076 APAPLGASPARRRLL-p Q2QGD7;S34-p APAPLGASPARRRLL 0.863128069097415 0.0282445461716627 0.026 -0.340333333333333 1.2469308477144 20.9895590414506 0.026 -0.340333333333333 0.750424345694133 0.00796240192129688 0.334720829162498 -4.09054091581019 Q2QGD7 ZXDC Q2QGD7.S34.p_ZXDC Q2QGD7_S34s _1_1_34_34 Q2QGD7 Q2QGD7|Q2QGD7-2 Zinc finger protein ZXDC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7232.7232.3 12.4 7.67 99 1 1 1 0 491.6023 1392.8273 S34s TMT10 26 (R) RAPAPLGAsPAR (R) RAPAPLGAS(1.0)PAR s:Phosphorylated S ZXDC 91413 4 1 4100.1 37.66 HUMAN 1 1.2469 -20.9896 APAPPAQSPEEPVGA-p Q24JP5-2;S977-p APAPPAQSPEEPVGA 0.233628206047255 0.342172289480981 0.182666666666667 0.095 12.1179757068423 6.16962597951839 0.182666666666667 0.095 0.0614048152901003 0.2415668866268 2.35327779850499 1.31440427751443 Q24JP5 TMEM132A Q24JP5.2.S977.p_TMEM132A Q24JP5-2_S977s _1_1_977_977 Q24JP5-2 Q24JP5-2|Q24JP5-4 Isoform 2 of Transmembrane protein 132A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34494.34494.4 12.62 12.62 3.518 3 1 1 0 1046.5405 4103.1651 S977s TMT10 963 (K) RVEFVTFAPAPPAQsPEEPVGAPAVQSILVAGEEDIR (W) RVEFVT(0.0)FAPAPPAQS(0.99)PEEPVGAPAVQS(0.0)ILVAGEEDIR s:Phosphorylated S TMEM132A 111164.8 2 4 1425.1 143.96 HUMAN 1 12.118 6.1696 APAPQQCSEPETKWS-p Q3YEC7-2;S493-p APAPQQCSEPETKWS 0.145152146047681 0.110235548775255 -0.347 0.177333333333333 17.0763702432823 12.6452115267414 -0.347 0.177333333333333 0.0196048252570016 0.0543849642425916 -3.27769174154795 2.44602966866039 Q3YEC7 RABL6 Q3YEC7.2.S493.p_RABL6 Q3YEC7-2_S493s _1_1_493_493 Q3YEC7-2 Q3YEC7-2|G3V154 Isoform 2 of Rab-like protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8961.8961.3 16.64 16.64 5.398 2 1 1 0 712.3486 2055.0581 S493s TMT10 484 (K) GPAPAPQQCsEPETK (W) GPAPAPQQCS(0.99)EPET(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RABL6 79919.7 5 5 429.1 317.58 HUMAN 1 -17.0764 12.6452 APARSSGSPEPSPAI-p Q66K64;S310-p APARSSGSPEPSPAI 0.778996094549543 0.0143527357400286 -0.039 -0.382333333333333 2.08434648910949 25.5541509195121 -0.039 -0.382333333333333 0.618821438596767 0.00278345950928184 -0.527401196835762 -5.17885785861866 Q66K64 DCAF15 Q66K64.S310.p_DCAF15 Q66K64_S310s _1_1_310_310 Q66K64 Q66K64 DDB1- and CUL4-associated factor 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11832.11832.3 16.03 16.03 2.138 4 1 1 0 589.31 1685.9474 S310s TMT10 307 (R) SSGsPEPSPAIAK (A) S(0.0)S(0.0)GS(0.99)PEPS(0.0)PAIAK K:TMT10,s:Phosphorylated S DCAF15 67432.2 4 2 3179.1 58.55 HUMAN 1 -2.0843 -25.5542 APASLSRSAFLSQRY-p P35658-3;S971-p APASLSRSAFLSQRY 0.804577285543958 0.00851571610724233 0.0366666666666667 -0.439333333333333 1.82036441011324 29.3743016223889 0.0366666666666667 -0.439333333333333 0.657602656568509 0.00115496769709529 0.468642432032727 -6.23437781868678 P35658 NUP214 P35658.3.S971.p_NUP214 P35658-3_S971s _1_1_971_971 P35658-3 P35658-5|P35658-3|P35658-4|P35658-2 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12419.12419.2 12.04 3.15 3.394 2 1 1 0 559.2836 1037.5941 S971s TMT10 971 (R) sAFLSQR (Y) S(0.99)AFLS(0.0)QR s:Phosphorylated S NUP214 214428.5 2 17 111.1 572.27 HUMAN 1 1.8204 -29.3743 APATLPASPAGRLEP-p Q9BT49;S162-p APATLPASPAGRLEP 0.72251740159762 0.780047555710737 0.0506666666666667 -0.033 2.67088420396423 1.49322214324162 0.0506666666666667 -0.033 0.540644239012681 0.709051509086267 0.652733987906494 -0.393357132060282 Q9BT49 THAP7 Q9BT49.S162.p_THAP7 Q9BT49_S162s _1_1_162_162 Q9BT49 Q9BT49 THAP domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28009.28009.3 17.96 17.96 2.027 7 1 1 0 1190.5583 3489.6995 S162s Hydrogen 132 (R) GPTTPFSPPPPADVTCFPVEEASAPATLPAsPAGR (L) GPT(0.0)T(0.0)PFS(0.0)PPPPADVT(0.0)CFPVEEAS(0.0)APAT(0.0)LPAS(0.99)PAGR C:Carbamidomethylation,s:Phosphorylated S THAP7 35041.1 3 1 3510.1 49.47 HUMAN 1 2.6709 -1.4932 APAVAYDSKQYYQQP-p Q96KR1;S157-p APAVAYDSKQYYQQP 0.219716131376416 0.808920823037043 -0.184 -0.0433333333333333 12.6691490718579 1.29018321468277 -0.184 -0.0433333333333333 0.0540860285183685 0.742987793002885 -2.4516167580084 -0.345127904008175 Q96KR1 ZFR Q96KR1.S157.p_ZFR Q96KR1_S157s _1_1_157_157 Q96KR1 Q96KR1 Zinc finger RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11319.11319.3 8.52 8.52 2.567 4 1 1 0 549.9514 1567.8732 S157s TMT10 148 (R) STAPAVAYDsK (Q) S(0.0)T(0.0)APAVAY(0.0)DS(0.99)K K:TMT10,s:Phosphorylated S ZFR 118151.1 1 1 1692.1 120.73 HUMAN 1 -12.6691 -1.2902 APDGRRKSEAGSGAA-p P30305;S178-p APDGRRKSEAGSGAA 0.332486582433 0.00184315572268208 -0.209 -1.24466666666667 8.92921011931669 42.9893236842049 -0.209 -1.24466666666667 0.127961401503113 5.024208241528e-05 -1.79610870214964 -11.5612162798672 P30305 CDC25B P30305.S178.p_CDC25B P30305_S178s _1_1_178_178 P30305 P30305|P30305-2 M-phase inducer phosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13591.13591.4 17.77 17.77 4.382 5 1 1 0 889.9567 3476.8427 S178s TMT10 176 (R) RKsEAGSGAASSSGEDKENDGFVFK (M) RKS(0.99)EAGS(0.0)GAAS(0.0)S(0.0)S(0.0)GEDKENDGFVFK K:TMT10,s:Phosphorylated S CDC25B 65671 2 6 563.1 271.52 HUMAN 1 -8.9292 -42.9893 APDISPKSDTLTDSQ-p Q7Z333-4;S950-p APDISPKSDTLTDSQ 0.290032260597828 0.163334598344602 -0.174 -0.201 10.1330367962345 10.3453393312084 -0.174 -0.201 0.0969831577132218 0.0923562024099259 -2.00483327166949 -2.04091913148008 Q7Z333 SETX Q7Z333.4.S950.p_SETX Q7Z333-4_S947sS950s_2_2_947_950 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18446.18446.5 7.99 7.99 1.131 5 2 2 0 712.1577 3396.8214 S947s S950s TMT10 941 (R) EQAPDIsPKsDTLTDSQIDRDLHK (L) EQAPDIS(0.99)PKS(0.99)DT(0.0)LT(0.0)DS(0.0)QIDRDLHK K:TMT10,s:Phosphorylated S SETX 310728.6 4 20 192.1 463.82 HUMAN 1 -10.133 -10.3453 APDKGTDSPSPPPLE-p Q4AC94;S2018-p APDKGTDSPSPPPLE 0.472747504381845 0.409375565038376 0.124333333333333 -0.124 5.99612343659607 5.16185660412243 0.124333333333333 -0.124 0.251412957173171 0.304659229634975 1.28387297114495 -1.13340271108376 Q4AC94 C2CD3 Q4AC94.S2018.p_C2CD3 Q4AC94_S2018sS2020s_2_2_2018_2020 Q4AC94 Q4AC94 C2 domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18574.18574.5 14.58 8.74 1.517 6 2 2 0 805.9751 3865.9101 S2018s S2020s TMT10 2001 (R) CTMPDEPLVRAPDKGTDsPsPPPLEETSNGGR (M) CT(0.0)MPDEPLVRAPDKGT(0.0)DS(0.99)PS(0.99)PPPLEET(0.0)S(0.0)NGGR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C2CD3 262780.3 3 17 722.1 237.14 HUMAN 1 5.9961 -5.1619 APDLAKASPKRLSLP-p Q765P7;S634-p APDLAKASPKRLSLP 0.240709737266473 0.00288941565953294 -0.175 -0.811 11.8206152605037 38.3790478670243 -0.175 -0.811 0.0657564674248666 0.000145243000867557 -2.30055659932107 -9.42565068667985 Q765P7 MTSS1L Q765P7.S634.p_MTSS1L Q765P7_S634s _1_1_634_634 Q765P7 Q765P7|A0A087WXN9 MTSS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24148.24148.5 21.52 21.52 3.303 6 1 1 0 725.1653 3541.8339 S634s TMT10 610 (R) AGSEECVFYTDETASPLAPDLAKAsPK (R) AGS(0.0)EECVFY(0.0)T(0.0)DET(0.0)AS(0.0)PLAPDLAKAS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTSS1L 80498.5 3 9 425.1 319.48 HUMAN 1 -11.8206 -38.379 APDLMCLSPDRKMEV-p P30305;S238-p APDLMCLSPDRKMEV 0.872036099278236 0.00177043297676807 0.0266666666666667 -0.947666666666667 1.16446978954667 43.46380388697 0.0266666666666667 -0.947666666666667 0.764809054811224 4.50422017278039e-05 0.314639920276897 -11.8046737814717 P30305 CDC25B P30305.S238.p_CDC25B P30305_S238s _1_1_238_238 P30305 P30305-4|P30305-2|P30305-3|B4DIG0|G8JLH2 M-phase inducer phosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27440.27440.5 17.94 14.56 4.656 4 1 1 0 868.6407 4259.2027 S238s TMT10 222 (R) EAFAQRPSSAPDLMCLsPDRKMEVEELSPLALGR (F) EAFAQRPS(0.0)S(0.0)APDLMCLS(0.99)PDRKMEVEELS(0.0)PLALGR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CDC25B 65671 2 8 563.1 271.52 HUMAN 1 1.1645 -43.4638 APDMFTESDDMFAAY-p Q13523;S636-p APDMFTESDDMFAAY 0.52155238503858 0.0205088558078449 0.097 0.350333333333333 5.22787097263878 23.1050506126461 0.097 0.350333333333333 0.300063314887303 0.00489209563856638 1.14565745691337 4.57415200935547 Q13523 PRPF4B Q13523.S636.p_PRPF4B Q13523_S636s _1_1_636_636 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34753.34753.3 20.94 20.94 1.1 4 1 1 0 1060.5012 3099.5208 S636s TMT10 626 (K) KLLAPDMFTEsDDMFAAYFDSAR (L) KLLAPDMFT(0.0)ES(0.99)DDMFAAY(0.0)FDS(0.0)AR K:TMT10,s:Phosphorylated S PRPF4B 117327.1 2 27 70.1 666.55 HUMAN 1 5.2279 23.1051 APDSKRQSILFSTEV-p P11274;S1264-p APDSKRQSILFSTEV 0.411470406153794 0.075937453637008 -0.155333333333333 -0.206 7.11493714043531 14.8588515101862 -0.155333333333333 -0.206 0.194314981667752 0.0326674209599131 -1.48111773544079 -2.85018190703129 P11274 BCR P11274.S1264.p_BCR P11274_S1264s _1_1_1264_1264 P11274 P11274|P11274-2 Breakpoint cluster region protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20689.20689.2 10.05 10.05 4.463 3 1 1 0 744.8872 1408.7997 S1264s TMT10 1262 (K) RQsILFSTEV (-) RQS(0.99)ILFS(0.0)T(0.0)EV s:Phosphorylated S BCR 143843.8 2 12 642.1 254.93 HUMAN 1 -7.1149 -14.8589 APDYTRLSPAKIVLR-p Q8TEK3;S775-p APDYTRLSPAKIVLR 0.0898018172556756 0.00106567586669276 -0.356 -1.271 22.2912266005018 50.3859063684356 -0.356 -1.271 0.00590034410147769 9.14975284885863e-06 -4.38884500180727 -15.9563826450887 Q8TEK3 DOT1L Q8TEK3.S775.p_DOT1L Q8TEK3_S775s _1_1_775_775 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20425.20425.3 15.82 13.1 1.25 4 1 1 0 733.4058 2118.2323 S775s TMT10 763 (K) LSGLAAPDYTRLsPAK (I) LS(0.0)GLAAPDY(0.0)T(0.0)RLS(0.99)PAK K:TMT10,s:Phosphorylated S DOT1L 185648.6 2 9 132.1 534.85 HUMAN 1 -22.2912 -50.3859 APEERVRTPEEASGL-p I3L2J0;T143-p APEERVRTPEEASGL 0.852742978991457 0.655966666633981 -0.027 -0.0426666666666667 1.34045086229418 2.50281957991579 -0.027 -0.0426666666666667 0.734437618646198 0.561976353544764 -0.357223928793118 -0.617406019251314 I3L2J0 NotFound I3L2J0.T143.p_NotFound I3L2J0_T143t _1_1_143_143 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11604.11832.4 12.44 9.53 12.436 5 1 1 0 629.0822 2433.3411 T143t TMT10 141 (R) VRtPEEASGLGVPPRPPTSTR (S) VRT(0.99)PEEAS(0.0)GLGVPPRPPT(0.0)S(0.0)T(0.0)R t:Phosphorylated T CIC 259056.7 3 2 23.1 999.57 HUMAN 1 -1.3405 -2.5028 APEFMEMSVEQEILV-p P06576;S177-p APEFMEMSVEQEILV 0.832987870919974 0.0334297264027448 0.0446666666666667 0.291333333333333 1.5324533760183 19.8954807470671 0.0446666666666667 0.291333333333333 0.702675258966675 0.0102435838155316 0.402576884472424 3.85297387399016 P06576 ATP5B P06576.S177.p_ATP5B P06576_S177s _1_1_177_177 P06576 P06576 ATP synthase subunit beta, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.35155.35155.4 20.94 20.94 4.858 2 1 1 0 896.4574 3502.8366 S177s TMT10 162 (K) QFAPIHAEAPEFMEMsVEQEILVTGIK (V) QFAPIHAEAPEFMEMS(0.99)VEQEILVT(0.0)GIK K:TMT10,s:Phosphorylated S ATP5B 56558.9 1 3 2156.1 95.32 HUMAN 1 1.5325 19.8955 APEGRPDSGVPSLRA-p Q8WZA9;S44-p APEGRPDSGVPSLRA 0.102728705875057 0.135865093863222 -0.357333333333333 -0.18 20.8947784163763 11.424315347731 -0.357333333333333 -0.18 0.00813808381455989 0.0720391309823649 -4.07366545797066 -2.22956979745484 Q8WZA9 IRGQ Q8WZA9.S44.p_IRGQ Q8WZA9_S44s _1_1_44_44 Q8WZA9 Q8WZA9 Immunity-related GTPase family Q protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27594.27594.4 17.73 17.73 4.152 4 1 1 0 926.9788 3624.9307 S44s TMT10 21 (K) SALIAALCDKDVETLEAPEGRPDsGVPSLR (A) S(0.0)ALIAALCDKDVET(0.0)LEAPEGRPDS(0.99)GVPS(0.0)LR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S IRGQ 63229.6 1 1 3384.1 52.28 HUMAN 1 -20.8948 -11.4243 APEKKEKTPELPEPS-p A9Z1X7;T220-p APEKKEKTPELPEPS 0.408212752580453 0.00714231278100688 -0.192666666666667 0.487 7.1790236725622 30.7151880190579 -0.192666666666667 0.487 0.191468631286903 0.000848166661988435 -1.49231541203402 6.64184741080148 A9Z1X7 NotFound A9Z1X7.T220.p_NotFound A9Z1X7_T220t _1_1_220_220 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15383.15793.3 16.81 16.81 5.753 2 1 1 0 707.7324 2041.2148 T220t TMT10 218 (K) EKtPELPEPSVK (V) EKT(0.99)PELPEPS(0.0)VK K:TMT10,t:Phosphorylated T SRRM1 103445.7 28 2 8.1 1346.57 HUMAN 1 -7.179 30.7152 APELLLHSPARSAMC-p Q5VUA4;S1896-p APELLLHSPARSAMC 0.731310539054784 0.0104414023033067 -0.053 -0.522666666666667 2.57883243927625 27.8013465705111 -0.053 -0.522666666666667 0.552225880169239 0.00165907241681738 -0.633488688747444 -5.78179381240921 Q5VUA4 ZNF318 Q5VUA4.S1896.p_ZNF318 Q5VUA4_S1896s _1_1_1896_1896 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21164.21370.3 22.44 19.15 11.88 2 1 1 0 571.6482 1632.9635 S1896s TMT10 1887 (K) ISAPELLLHsPAR (S) IS(0.0)APELLLHS(0.99)PAR s:Phosphorylated S ZNF318 252762.4 3 27 37.1 870.88 HUMAN 1 -2.5788 -27.8013 APELNVSSSETEEDK-p Q86UV5-8;S899-p APELNVSSSETEEDK 0.918221647629323 0.950561945305192 0.028 0.00800000000000003 0.723510315443035 0.315026444826328 0.028 0.00800000000000005 0.846542893844677 0.93003085164281 0.20300955586223 0.0919614391025567 Q86UV5 USP48 Q86UV5.8.S899.p_USP48 Q86UV5-8_S898sS899sS900s_3_3_898_900 Q86UV5-8 Q86UV5-8|Q86UV5-6 Isoform 8 of Ubiquitin carboxyl-terminal hydrolase 48 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15515.15515.5 13.8 13.8 2.307 7 3 3 0 1125.3287 5382.707 S898s S899s S900s TMT10 890 (K) DSAPELNVsssETEEDKEEAKPDGEKDPDFNQSNGGTKR (Q) DS(0.0)APELNVS(0.99)S(0.99)S(0.99)ET(0.0)EEDKEEAKPDGEKDPDFNQS(0.0)NGGT(0.0)KR K:TMT10,s:Phosphorylated S USP48 122634.9 3 5 3513.1 49.33 HUMAN 1 0.7235 0.315 APELRLQSDDILPLG-p Q7L2E3-2;S408-p APELRLQSDDILPLG 0.751959847799119 0.00840448513471 -0.0903333333333333 0.510666666666667 2.36138237194533 29.4871529558285 -0.0903333333333334 0.510666666666667 0.580579587938463 0.00112534245737484 -0.587424585097558 6.26788153270883 Q7L2E3 DHX30 Q7L2E3.2.S408.p_DHX30 Q7L2E3-2_S408s _1_1_408_408 Q7L2E3-2 Q7L2E3-2|H7BXY3|Q7L2E3-3 Isoform 2 of Putative ATP-dependent RNA helicase DHX30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26928.26928.3 13 9.02 99 1 1 1 0 579.6581 1656.9936 S408s TMT10 406 (R) LQsDDILPLGK (D) LQS(1.0)DDILPLGK K:TMT10,s:Phosphorylated S DHX30 137139.9 2 2 4896.1 25.35 HUMAN 1 -2.3614 29.4872 APEPDLMSPTRKAQR-p Q9H7D0;S1756-p APEPDLMSPTRKAQR 0.0866557243462627 0.000952253650599092 -0.343666666666667 -1.37033333333333 22.6975369356681 53.3138223804932 -0.343666666666667 -1.37033333333333 0.00537336455784613 4.66248837457776e-06 -4.48328714648238 -18.1055476084321 Q9H7D0 DOCK5 Q9H7D0.S1756.p_DOCK5 Q9H7D0_S1756s _1_1_1756_1756 Q9H7D0 Q9H7D0 Dedicator of cytokinesis protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17096.17096.4 16.88 16.88 1.717 3 1 1 0 716.8938 2784.5897 S1756s TMT10 1742 (K) SQVIAEKAPEPDLMsPTRK (A) S(0.0)QVIAEKAPEPDLMS(0.99)PT(0.0)RK K:TMT10,s:Phosphorylated S DOCK5 216331.8 2 8 828.1 217.17 HUMAN 1 -22.6975 -53.3138 APEPKKETESEAEDN-p A9Z1X7;T881-p APEPKKETESEAEDN 0.889554663153291 0.416839862910887 0.026 0.185 0.992198647140972 5.05469821116215 0.026 0.185 0.795756391012508 0.312269939334091 0.271920393798636 1.11384524943742 A9Z1X7 NotFound A9Z1X7.T881.p_NotFound A9Z1X7_T881tS883s_2_2_881_883 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18990.18990.2 11.82 11.82 99 2 2 2 0 1356.6304 2552.3182 T881t S883s TMT10 879 (K) KEtEsEAEDNLDDLEK (H) KET(1.0)ES(1.0)EAEDNLDDLEK K:TMT10,t:Phosphorylated T,s:Phosphorylated S SRRM1 103445.7 5 78 8.1 1346.57 HUMAN 1 0.9922 5.0547 APEPPPATPPQAKFP-p O15047;T1185-p APEPPPATPPQAKFP 0.0986992178204749 0.0508197960033686 0.342 -0.351666666666667 21.2785630432945 17.2810315499178 0.342 -0.351666666666667 0.00744978425267565 0.0187023786282321 4.15887596481128 -3.31561410906654 O15047 SETD1A O15047.T1185.p_SETD1A O15047_T1185t _1_1_1185_1185 O15047 O15047 Histone-lysine N-methyltransferase SETD1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28714.28714.4 22.98 22.98 13.557 4 1 1 0 742.8996 2888.6174 T1185t TMT10 1167 (K) TVSFSAIEVVPAPEPPPAtPPQAK (F) T(0.0)VS(0.0)FS(0.0)AIEVVPAPEPPPAT(0.99)PPQAK K:TMT10,t:Phosphorylated T SETD1A 186829.5 1 9 570.2 269.37 HUMAN 1 21.2786 -17.281 APEPVQITPPAPSAQ-p Q6BDS2;T282-p APEPVQITPPAPSAQ 0.128023476673973 0.575732166242944 -0.295666666666667 -0.066 18.4871368146455 3.23214390413041 -0.295666666666667 -0.066 0.0141672748202306 0.475100633585723 -3.56153208494333 -0.767068983133009 Q6BDS2 UHRF1BP1 Q6BDS2.T282.p_UHRF1BP1 Q6BDS2_T282t _1_1_282_282 Q6BDS2 Q6BDS2|H7C1J4 UHRF1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27261.27261.4 15.19 15.19 1.152 10 1 1 0 1009.7354 3955.9372 T282t TMT10 273 (K) SLAPEPVQItPPAPSAQQSWAQAFGGSQGNSNSSSSR (L) S(0.0)LAPEPVQIT(0.99)PPAPS(0.0)AQQS(0.0)WAQAFGGS(0.0)QGNS(0.0)NS(0.0)S(0.0)S(0.0)S(0.0)R t:Phosphorylated T UHRF1BP1 160680.5 5 22 398.2 328.88 HUMAN 1 -18.4871 -3.2321 APEPVVGTPDDKLDA-p Q92503-2;T234-p APEPVVGTPDDKLDA 0.0837815603906397 0.0014286003693118 -0.504666666666667 -0.915333333333333 23.0200183694118 46.0349401528923 -0.504666666666667 -0.915594631320197 0.00498882377326088 2.49175870821429e-05 -4.5591612989452 -13.2098506873655 Q92503 SEC14L1 Q92503.2.T234.p_SEC14L1 Q92503-2_T234t _1_1_234_234 Q92503-2 Q92503-2|Q92503-3 Isoform 2 of SEC14-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22078.22078.4 27.02 24.62 5.82 6 1 1 0 1017.5286 3987.1166 T234t TMT10 215 (K) EGLSGDALSSPSAPEPVVGtPDDKLDADYIKR (Y) EGLS(0.0)GDALS(0.0)S(0.0)PS(0.0)APEPVVGT(0.99)PDDKLDADY(0.0)IKR K:TMT10,t:Phosphorylated T SEC14L1 82753.7 6 1 2269.1 90.5 HUMAN 1 -23.02 -46.0349 APERPPISPVPGARQ-p P29590-8;S819-p APERPPISPVPGARQ 0.688287844973563 0.667280248823757 0.08 0.0726666666666667 3.04489625187658 2.40457081826722 0.08 0.0726666666666667 0.49603277692601 0.574834622774637 0.729516572950151 0.596568766235334 P29590 PML P29590.8.S819.p_PML P29590-8_S819s _1_1_819_819 P29590-8 P29590-8|P29590-3|P29590-13 Isoform PML-2 of Protein PML HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28829.29042.5 25.55 25.55 2.714 5 1 1 0 836.0245 4096.1197 S819s TMT10 789 (R) GSMEASQVQVPLEASPITFPPPCAPERPPIsPVPGAR (Q) GS(0.0)MEAS(0.0)QVQVPLEAS(0.0)PIT(0.0)FPPPCAPERPPIS(0.99)PVPGAR C:Carbamidomethylation,s:Phosphorylated S PML 92374.1 6 14 777.1 226.8 HUMAN 1 3.0449 2.4046 APESADDSPSQLSKW-p O43524;S284-p APESADDSPSQLSKW 0.959344047178047 0.101276297312324 0.00766666666666666 0.240666666666667 0.348464852860722 13.1398230693865 0.00766666666666666 0.240666666666667 0.922897595984906 0.0485308271111255 0.10138243921055 2.53488436818929 O43524 FOXO3 O43524.S284.p_FOXO3 O43524_S284s _1_1_284_284 O43524 O43524|O43524-2 Forkhead box protein O3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14079.14079.3 24.76 22.81 2.601 5 1 1 0 937.8325 2731.5081 S284s TMT10 271 (K) KAALQTAPESADDsPSQLSK (W) KAALQT(0.0)APES(0.0)ADDS(0.99)PS(0.0)QLS(0.0)K K:TMT10,s:Phosphorylated S FOXO3 71560.7 5 5 938.1 198.15 HUMAN 1 0.3485 13.1398 APETPAISPSKRARP-p H0YNW5;S14-p APETPAISPSKRARP 0.349528231300178 0.812748448415635 0.189333333333333 -0.0303333333333333 8.48066224469376 1.26092604634702 0.189333333333333 -0.0303333333333333 0.141884114968678 0.748009985297423 1.71845806200393 -0.338071830783999 H0YNW5 DUT H0YNW5.S14.p_DUT H0YNW5_S14s _1_1_14_14 H0YNW5 H0YNW5|H0YMM5 Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15971.15971.2 16.49 16.49 2.506 3 1 1 0 888.4395 1695.9115 S14s Acetyl 2 (M) AAGGAAPETPAIsPSK (R) AAGGAAPET(0.0)PAIS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S DUT 17940.9 3 1 2301.2 89.12 HUMAN 1 8.4807 -1.2609 APEVWGLSPKNPEPD-p Q8N5F7;S149-p APEVWGLSPKNPEPD 0.558906099125035 0.316481538725525 -0.105 0.157666666666667 4.66348269882401 6.60200748061015 -0.105 0.157666666666667 0.341705311933892 0.218675058781468 -1.04201216061889 1.39078802065728 Q8N5F7 NKAP Q8N5F7.S149.p_NKAP Q8N5F7_S149s _1_1_149_149 Q8N5F7 Q8N5F7 NF-kappa-B-activating protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.31050.31050.2 19.63 15.33 99 1 1 1 0 1046.0691 2011.1628 S149s TMT10 137 (R) IGELGAPEVWGLsPK (N) IGELGAPEVWGLS(1.0)PK K:TMT10,s:Phosphorylated S NKAP 47251.6 4 3 2507.1 80.61 HUMAN 1 -4.6635 6.602 APFPSLDSPGKAIRG-p Q92844;S357-p APFPSLDSPGKAIRG 0.762246276094574 0.890210845318974 -0.0483333333333333 -0.017 2.25739659151213 0.708387617557688 -0.0483333333333333 -0.017 0.594648517985231 0.849495804368225 -0.565078844177756 -0.199022164537496 Q92844 TANK Q92844.S357.p_TANK Q92844_S357s_1_1_357_357 Q92844 Q92844|E7EQA9 TRAF family member-associated NF-kappa-B activator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.34817.34817.4 8.86 9.48 1.329 5 1 1 0 1055.5154 4138.0996 N340n S357s TMT10 326 (R) AACLPPGDHNALYVnSFPLLDPSDAPFPSLDsPGK (A) AACLPPGDHN(0.0)ALY(0.0)VN(0.99)S(0.0)FPLLDPS(0.0)DAPFPS(0.0)LDS(0.99)PGK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S TANK 48442.4 5 4 3536.1 48.81 HUMAN 1 -2.2574 -0.7084 APFVGRMSAQESTPI-p I3L4C2;S324-p APFVGRMSAQESTPI 0.0745793811074775 0.645772194420276 -0.459 -0.0456666666666666 24.1585537690819 2.58923680688011 -0.459 -0.0456666666666666 0.00383835043959211 0.550904499289244 -4.8337727990782 -0.635588820406368 I3L4C2 BAIAP2 I3L4C2.S324.p_BAIAP2 I3L4C2_S324s_1_1_324_324 I3L4C2 I3L4C2|Q9UQB8|Q9UQB8-2|Q9UQB8-6|Q9UQB8-4|Q9UQB8-5|Q9UQB8-3|B4DWA1 Brain-specific angiogenesis inhibitor 1-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23234.23234.4 12.32 9.49 2.19 6 1 1 0 895.4174 3497.6717 S324s N333n TMT10 323 (R) MsAQESTPIMnGVTGPDGEDYSPWADRK (A) MS(0.99)AQES(0.0)T(0.0)PIMN(1.0)GVT(0.0)GPDGEDY(0.0)S(0.0)PWADRK K:TMT10,s:Phosphorylated S,n:Deamidated BAIAP2 61608.4 2 7 386.1 333.05 HUMAN 1 -24.1586 -2.5892 APGAFGQSPFSQPPA-p Q96I24;S439-p APGAFGQSPFSQPPA 0.730794964972152 0.942309811585179 0.0476666666666667 0.00766666666666667 2.58524707282732 0.369128407651245 0.0476666666666667 0.00766666666666667 0.551410831384822 0.918516916575446 0.634834550231012 0.10715818652469 Q96I24 FUBP3 Q96I24.S439.p_FUBP3 Q96I24_S439s _1_1_439_439 Q96I24 Q96I24 Far upstream element-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22594.22594.4 23.1 16.66 1.12 4 1 1 0 885.187 3457.7603 S439s TMT10 425 (K) VGGTNLGAPGAFGQsPFSQPPAPPHQNTFPPR (S) VGGT(0.0)NLGAPGAFGQS(0.99)PFS(0.0)QPPAPPHQNT(0.0)FPPR s:Phosphorylated S FUBP3 61981.6 7 7 858.1 210.79 HUMAN 1 2.5852 0.3691 APGAPTRSPSTPAKS-p Q9BQG0-2;S1241-p APGAPTRSPSTPAKS 0.360856931586133 0.00455102858437049 -0.191333333333333 -0.91 8.22977402011003 34.3125728370659 -0.191333333333333 -0.91 0.150322018230225 0.000370461189022792 -1.67499848974779 -7.84454544534382 Q9BQG0 MYBBP1A Q9BQG0.2.S1241.p_MYBBP1A Q9BQG0-2_S1241s _1_1_1241_1241 Q9BQG0-2 Q9BQG0-2 Isoform 2 of Myb-binding protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7420.7420.3 14.25 10.87 1.403 5 1 1 0 687.3696 1980.1278 S1241s TMT10 1232 (K) SPAPGAPTRsPSTPAK (S) S(0.0)PAPGAPT(0.0)RS(0.99)PS(0.0)T(0.0)PAK K:TMT10,s:Phosphorylated S MYBBP1A 150334.3 2 8 297.1 378.74 HUMAN 1 -8.2298 -34.3126 APGDDTESLHSQGEE-p Q12888-2;S1221-p APGDDTESLHSQGEE 0.397817398122165 0.0277238968700976 0.113333333333333 0.3535 7.38963959646608 21.1044752736542 0.113333333333333 0.3535 0.182404706637323 0.00775447629380857 1.52905981667494 4.11596880731345 Q12888 TP53BP1 Q12888.2.S1221.p_TP53BP1 Q12888-2_S1221sS1224s_2_2_1221_1224 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13407.13407.4 19.68 18.47 1.176 5 2 2 0 1178.0378 4549.1843 S1221s S1224s TMT10 1206 (R) GSGEKPVSAPGDDTEsLHsQGEEEFDMPQPPHGHVLHR (H) GS(0.0)GEKPVS(0.0)APGDDT(0.0)ES(0.99)LHS(0.99)QGEEEFDMPQPPHGHVLHR K:TMT10,s:Phosphorylated S TP53BP1 216167.2 11 102 3.1 2297.07 HUMAN 2 7.3896 21.1045 APGKGGGSKGSPGQR-p A6NEL2;S163-p APGKGGGSKGSPGQR 0.581677715133505 0.622588696144184 -0.0736666666666667 -0.0976666666666667 4.33048921965201 2.79702143458335 -0.0736666666666667 -0.0976666666666667 0.368936036696063 0.525167517672249 -0.979798897897617 -0.678783024030179 A6NEL2 SOWAHB A6NEL2.S163.p_SOWAHB A6NEL2_S163sS166s_2_2_163_166 A6NEL2 A6NEL2 Ankyrin repeat domain-containing protein SOWAHB HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9763.9763.4 11.47 8.14 99 2 2 2 0 709.3588 2674.4902 S163s S166s TMT10 160 (K) GGGsKGsPGQRPPVPAAAAAGAQAR (A) GGGS(1.0)KGS(1.0)PGQRPPVPAAAAAGAQAR K:TMT10,s:Phosphorylated S SOWAHB 86311.4 1 11 711.1 238.55 HUMAN 1 -4.3305 -2.797 APGLGVLSPSGEERK-p Q15746;S365-p APGLGVLSPSGEERK 0.373228695696441 0.817598851402086 -0.148666666666667 0.0273333333333334 7.93397817054796 1.22312211808417 -0.148666666666667 0.0273333333333333 0.160917094701906 0.754549591272739 -1.6237054561199 0.328912933389501 Q15746 MYLK Q15746.S365.p_MYLK Q15746_S365s _1_1_365_365 Q15746 Q15746|Q15746-6|Q15746-3|Q15746-2|Q15746-5|Q15746-4 Myosin light chain kinase, smooth muscle HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18460.18460.3 8.25 8.25 2.545 2 1 1 0 559.9517 1597.8747 S365s TMT10 358 (R) APGLGVLsPSGEER (K) APGLGVLS(0.99)PS(0.0)GEER s:Phosphorylated S MYLK 213449.8 1 2 4738.1 27.26 HUMAN 1 -7.934 1.2231 APGMLPLSV______-p Q9GZM8;S344-p APGMLPLSV______ 0.716526506506913 0.673938544852609 0.0543333333333333 -0.046 2.72995868206072 2.34208875934222 0.0543333333333333 -0.046 0.533339969557076 0.583164561129415 0.665009092924046 -0.583222429456326 Q9GZM8 NDEL1 Q9GZM8.S344.p_NDEL1 Q9GZM8_S344s _1_1_344_344 Q9GZM8 Q9GZM8 Nuclear distribution protein nudE-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.30767.30767.3 12.38 12.38 3.185 5 1 1 0 1080.2083 3158.6506 S344s TMT10 315 (K) GAVNGFDPAPPPPGLGSSRPSSAPGMLPLsV (-) GAVNGFDPAPPPPGLGS(0.0)S(0.0)RPS(0.0)S(0.0)APGMLPLS(0.99)V s:Phosphorylated S NDEL1 38545.3 1 5 3012.1 63.32 HUMAN 1 2.73 -2.3421 APGNLDNSKSGEIKG-p Q9Y6M7-13;S275-p APGNLDNSKSGEIKG 0.650350152036488 0.104940821363575 -0.0666666666666667 -0.193666666666667 3.50451414574313 12.933162245971 -0.0666666666666667 -0.193666666666667 0.446219541295617 0.0508960144896211 -0.821147278997546 -2.49766810893374 Q9Y6M7 SLC4A7 Q9Y6M7.13.S275.p_SLC4A7 Q9Y6M7-13_S275s _1_1_275_275 Q9Y6M7-13 Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-9|Q9Y6M7-2|Q9Y6M7-3|Q9Y6M7-4|Q9Y6M7-14|Q9Y6M7-11 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17672.17672.3 15.39 12.78 3.405 3 1 1 0 774.4037 2241.2239 S275s TMT10 259 (R) NGILASPQSAPGNLDNsK (S) NGILAS(0.0)PQS(0.0)APGNLDNS(0.99)K K:TMT10,s:Phosphorylated S SLC4A7 128884.6 2 8 207.1 445.25 HUMAN 1 -3.5045 -12.9332 APGNTAPSPSSPTSP-p P49757;S238-p APGNTAPSPSSPTSP 0.885311858337516 0.56139328956448 -0.0286666666666667 0.06 1.04510341163978 3.3804972349177 -0.0286666666666667 0.06 0.786121472264566 0.459145441085412 -0.285154189630124 0.796570304043673 P49757 NUMB P49757.S238.p_NUMB P49757_S238s _1_1_238_238 P49757 P49757|P49757-3|P49757-2|P49757-4|G3V3Z8 Protein numb homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18371.18371.4 21.24 21.24 2.365 13 1 1 0 1103.2961 4330.1935 S238s TMT10 224 (K) IVVGSSVAPGNTAPsPSSPTSPTSDATTSLEMNNPHAIPRR (H) IVVGS(0.0)S(0.0)VAPGNT(0.0)APS(0.99)PS(0.0)S(0.0)PT(0.0)S(0.0)PT(0.0)S(0.0)DAT(0.0)T(0.0)S(0.0)LEMNNPHAIPRR s:Phosphorylated S NUMB 71487.2 14 2 538.1 277.23 HUMAN 1 -1.0451 3.3805 APGPRAPSPPEAALQ-p Q9NVR5;S240-p APGPRAPSPPEAALQ 0.96915478726984 0.12007498253139 0.007 0.179333333333333 0.2661069972796 12.1375018955212 0.00700000000000001 0.179333333333333 0.940566053383607 0.0611293545843144 0.0780857192684639 2.35555636093659 Q9NVR5 DNAAF2 Q9NVR5.S240.p_DNAAF2 Q9NVR5_S240s _1_1_240_240 Q9NVR5 Q9NVR5|Q9NVR5-2 Protein kintoun HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15555.15555.3 13.4 13.4 9.98 2 1 1 0 680.0124 1958.0545 S240s TMT10 238 (R) APsPPEAALQPAPTEPR (Y) APS(0.99)PPEAALQPAPT(0.0)EPR s:Phosphorylated S DNAAF2 91968.6 3 1 2831.1 68.73 HUMAN 1 0.2661 12.1375 APGPRPPSPFDDPAD-p Q93074-2;S635-p APGPRPPSPFDDPAD 0.253551933885431 0.00348121522294534 -0.457666666666667 0.842333333333333 11.3529020350969 36.7484787924577 -0.457666666666667 0.842333333333333 0.0732335009965615 0.000211422946338291 -2.21805429484396 8.76073244576914 Q93074 MED12 Q93074.2.S635.p_MED12 Q93074-2_S635s _1_1_635_635 Q93074-2 Q93074-2|Q93074-3|Q7Z3Z5 Isoform 2 of Mediator of RNA polymerase II transcription subunit 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21044.21044.5 22.15 22.15 99 1 1 1 0 648.9144 3160.574 S635s TMT10 622 (R) GDLAFGAPGPRPPsPFDDPADDPEHK (E) GDLAFGAPGPRPPS(1.0)PFDDPADDPEHK K:TMT10,s:Phosphorylated S MED12 246128.1 5 4 2302.1 89.02 HUMAN 1 -11.3529 36.7485 APGRGSESPVTISRA-p P60484-2;S24-p APGRGSESPVTISRA 0.718772981491302 0.931107842172259 0.0733333333333333 0.00866666666666667 2.70666328081576 0.436162543306382 0.0733333333333333 0.00866666666666667 0.536208472543944 0.90444829764629 0.660175463752624 0.125766962545413 P60484 PTEN P60484.2.S24.p_PTEN P60484-2_S24s _1_1_24_24 P60484-2 P60484-2 Isoform alpha of Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14712.14712.3 21.34 18.23 1.108 4 1 1 0 892.7855 2596.3641 S24s TMT10 4 (R) GGEAAAAAAAAAAAPGRGSEsPVTISR (A) GGEAAAAAAAAAAAPGRGS(0.0)ES(0.99)PVT(0.0)IS(0.0)R s:Phosphorylated S PTEN 65451.5 2 1 3070.1 61.61 HUMAN 1 2.7067 0.4362 APGRPQLSPGQKQKE-p P19878;S332-p APGRPQLSPGQKQKE 0.209850580534842 0.0090322518183777 -0.223333333333333 -0.602666666666667 13.0879016355041 28.9303178206599 -0.223333333333333 -0.602666666666667 0.0491145123595701 0.00127928768129344 -2.52691845886849 -6.10393412796001 P19878 NCF2 P19878.S332.p_NCF2 P19878_S332s _1_1_332_332 P19878 P19878|P19878-3|P19878-4|P19878-2 Neutrophil cytosol factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8933.8949.3 9.12 9.12 99 1 1 1 0 591.9982 1694.0114 S332s TMT10 325 (K) APGRPQLsPGQK (Q) APGRPQLS(1.0)PGQK K:TMT10,s:Phosphorylated S NCF2 60273.9 1 2 5859.1 15.8 HUMAN 1 -13.0879 -28.9303 APGSAPETPEDKSKP-p Q13459;T1271-p APGSAPETPEDKSKP 0.736725615926327 0.9704388309982 -0.0483333333333333 0.00400000000000002 2.51484196149459 0.185247011525031 -0.0483333333333334 0.00400000000000003 0.56042281061706 0.958242213287873 -0.620022909857052 0.0548239111822114 Q13459 MYO9B Q13459.T1271.p_MYO9B Q13459_T1271t _1_1_1271_1271 Q13459 Q13459|M0R0P8|Q13459-2 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12940.12940.3 13.46 13.46 4.72 3 1 1 0 706.3579 2037.0905 T1271t TMT10 1260 (R) VSPPAPGSAPEtPEDK (S) VS(0.0)PPAPGS(0.0)APET(0.99)PEDK K:TMT10,t:Phosphorylated T MYO9B 244993.9 1 8 211.1 438.12 HUMAN 1 -2.5148 0.1852 APGSPPDSPGRTLRR-p Q96C34;S75-p APGSPPDSPGRTLRR 0.9421991389452 0.853777085558957 0.0113333333333333 -0.02 0.508864448979009 0.966878437316098 0.0113333333333333 -0.02 0.889433647926475 0.800409355628059 0.145697750258392 -0.265523434681224 Q96C34 RUNDC1 Q96C34.S75.p_RUNDC1 Q96C34_S71sS75s_2_2_71_75 Q96C34 Q96C34|Q96C34-2 RUN domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29575.29981.5 30.47 30.47 5.48 4 2 2 0 835.9927 4015.9987 S71s S75s TMT10 40 (R) WAPVGAVAEARPGATAFLEEATAEEPGAAPGsPPDsPGR (T) WAPVGAVAEARPGAT(0.0)AFLEEAT(0.0)AEEPGAAPGS(0.99)PPDS(0.99)PGR s:Phosphorylated S RUNDC1 68155.4 8 6 1546.1 132.74 HUMAN 1 0.5089 -0.9669 APGSPPLSPRGHCPP-p Q86UU0;S25-p APGSPPLSPRGHCPP 0.336559539837921 0.583554577191142 -0.179 0.107666666666667 8.81525171726147 3.15822965539795 -0.179 0.107666666666667 0.131363535439401 0.483255754776584 -1.77638263572173 0.752262484542183 Q86UU0 BCL9L Q86UU0.S25.p_BCL9L Q86UU0_S21sS25s_2_2_21_25 Q86UU0 Q86UU0|Q86UU0-2|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11782.11782.2 8.79 8.79 99 2 2 2 0 748.8419 1336.7422 S21s S25s TMT10 17 (R) EAPGsPPLsPR (G) EAPGS(1.0)PPLS(1.0)PR s:Phosphorylated S BCL9L 157526.3 4 29 139.1 524.37 HUMAN 1 -8.8153 3.1582 APHPDRFSHDRTALV-p Q9H9J4;S1133-p APHPDRFSHDRTALV 0.281285200254826 0.42443411899609 -0.535 0.128 10.4168311478454 4.95438830067881 -0.535 0.128 0.0908483167843574 0.31956644391682 -2.05423057113806 1.09547314566201 Q9H9J4 USP42 Q9H9J4.S1133.p_USP42 Q9H9J4_S1133s _1_1_1133_1133 Q9H9J4 Q9H9J4|Q9H9J4-2 Ubiquitin carboxyl-terminal hydrolase 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5102.5102.5 17.06 17.06 99 1 1 1 0 453.0251 2181.1263 S1133s TMT10 1119 (R) AGAPHALAPHPDRFsHDR (T) AGAPHALAPHPDRFS(1.0)HDR s:Phosphorylated S USP42 146872.9 1 9 255.1 399.37 HUMAN 1 -10.4168 4.9544 APIEERESPAAQPLL-p Q9H6A9;S2023-p APIEERESPAAQPLL 0.863184537379147 0.984653817148504 0.038 0.00466666666666667 1.24643887816308 0.0996014141155118 0.038 0.00466666666666665 0.750509358710772 0.97732691374565 0.334601699383192 0.0297551059924163 Q9H6A9 PCNXL3 Q9H6A9.S2023.p_PCNXL3 Q9H6A9_S2023s _1_1_2023_2023 Q9H6A9 Q9H6A9|Q9H6A9-3 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30987.30987.4 23.25 18.02 1.603 7 1 1 0 1282.5989 5047.3927 S2023s TMT10 1990 (R) ASQDIPCLDSSAPESGTPMGALGDWPAPIEEREsPAAQPLLEHQY (-) AS(0.0)QDIPCLDS(0.0)S(0.0)APES(0.0)GT(0.0)PMGALGDWPAPIEERES(0.99)PAAQPLLEHQY(0.0) C:Carbamidomethylation,s:Phosphorylated S PCNX3 224430.8 2 23 168.1 492.45 HUMAN 1 1.2464 0.0996 APIILSDSEEEEMII-p Q06265;S394-p APIILSDSEEEEMII 0.949355669265611 0.210504808646645 -0.012 0.129333333333333 0.446268399124842 8.90215433322227 -0.012 0.129333333333333 0.902346130050145 0.128761066939464 -0.128563699648606 1.79078878931551 Q06265 EXOSC9 Q06265.S394.p_EXOSC9 Q06265_S392sS394s_2_2_392_394 Q06265 Q06265|D6RIY6|Q06265-3 Exosome complex component RRP45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30949.31350.5 25.88 25.88 1.718 5 2 2 0 1050.5278 5088.6666 S392s S394s TMT10 373 (K) MDTGVEVSDIGSQDAPIILsDsEEEEMIILEPDKNPKK (I) MDT(0.0)GVEVS(0.0)DIGS(0.0)QDAPIILS(0.99)DS(0.99)EEEEMIILEPDKNPKK K:TMT10,s:Phosphorylated S EXOSC9 49575.8 13 3 2666.1 74.5 HUMAN 1 -0.4463 8.9022 APKAPGPSPAKEKIG-p Q9H9J4;S936-p APKAPGPSPAKEKIG 0.723063863780764 0.048037171009988 0.0536666666666667 -0.315333333333333 2.66442933763113 17.6284564060399 0.0536666666666667 -0.315333333333333 0.541448389454608 0.01726451408058 0.651389190785913 -3.38475928967463 Q9H9J4 USP42 Q9H9J4.S936.p_USP42 Q9H9J4_S936s _1_1_936_936 Q9H9J4 Q9H9J4|Q9H9J4-2 Ubiquitin carboxyl-terminal hydrolase 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11699.11699.3 15.6 15.6 99 1 1 1 0 758.4219 2193.2846 S936s TMT10 924 (R) VEDAAAPKAPGPsPAK (E) VEDAAAPKAPGPS(1.0)PAK K:TMT10,s:Phosphorylated S USP42 146872.9 9 6 255.1 399.37 HUMAN 1 2.6644 -17.6285 APKAQRPSPKAPQKV-p I3L2J0;S2080-p APKAQRPSPKAPQKV 0.175566091093158 0.021307082498701 0.339 -0.403666666666667 15.0257100173535 22.8574374022956 0.339 -0.403666666666667 0.0314361243678916 0.00517912341125723 2.88327449977828 -4.51578924100045 I3L2J0 NotFound I3L2J0.S2080.p_NotFound I3L2J0_S2080s _1_1_2080_2080 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5415.5415.4 8.31 8.31 99 1 1 1 0 494.5429 1895.1794 S2080s TMT10 2076 (K) AQRPsPKAPQK (V) AQRPS(1.0)PKAPQK K:TMT10,s:Phosphorylated S CIC 259056.7 3 34 23.1 999.57 HUMAN 1 15.0257 -22.8574 APKFSPVTPKFTPVA-p Q15942;T270-p APKFSPVTPKFTPVA 0.505031370996872 0.00508156488682816 -0.0906666666666667 -0.581666666666667 5.4794278547005 33.4048557959724 -0.0906666666666667 -0.581666666666667 0.283176503170059 0.00045657741024021 -1.19123552239985 -7.52503472995754 Q15942 ZYX Q15942.T270.p_ZYX Q15942_S267sT270t_2_2_267_270 Q15942 Q15942|Q15942-2 Zyxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18616.18616.4 7.05 7.05 2.246 4 2 2 0 670.8583 2520.4793 S267s T270t TMT10 254 (R) GPPASSPAPAPKFsPVtPK (F) GPPAS(0.0)S(0.0)PAPAPKFS(0.99)PVT(0.99)PK K:TMT10,s:Phosphorylated S,t:Phosphorylated T ZYX 62474.4 2 9 1126.1 174.71 HUMAN 1 -5.4794 -33.4049 APKGILRTPDTIRRF-p Q00610-2;T394-p APKGILRTPDTIRRF 0.137499094333126 0.00637470005707546 0.254333333333333 0.491333333333333 17.6421224580125 31.5996835522967 0.254333333333333 0.491333333333333 0.0172102727926948 0.000691881382864572 3.39019649517225 6.92223709878221 Q00610 CLTC Q00610.2.T394.p_CLTC Q00610-2_T394t _1_1_394_394 Q00610-2 A0A087WVQ6|Q00610|Q00610-2 Isoform 2 of Clathrin heavy chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12127.12127.3 11.51 11.51 3.38 2 1 1 0 484.2712 1370.8317 T394t TMT10 390 (K) GILRtPDTIR (R) GILRT(0.99)PDT(0.0)IR t:Phosphorylated T CLTC 189655.7 8 4 1116.1 175.54 HUMAN 1 17.6421 31.5997 APKKRRISIGSLFRR-p Q9NV58;S66-p APKKRRISIGSLFRR 0.264646088491939 0.0135472769034869 -0.326 -0.898 10.9509192750599 25.966373486292 -0.326 -0.898 0.0803356057083758 0.00253141093248393 -2.14751300113276 -5.28583511907178 Q9NV58 RNF19A Q9NV58.S66.p_RNF19A Q9NV58_S66s _1_1_66_66 Q9NV58 Q9NV58|Q9NV58-3|Q9NV58-2|A3KCU8 E3 ubiquitin-protein ligase RNF19A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24806.24806.3 10.87 10.87 10.866 2 1 1 0 453.2554 1277.7891 S66s TMT10 64 (R) RIsIGSLFR (R) RIS(0.99)IGS(0.0)LFR s:Phosphorylated S RNF19A 92691.7 1 2 2862.1 67.91 HUMAN 1 -10.9509 -25.9664 APKSVNGSVAEEAPC-p Q02040;S515-p APKSVNGSVAEEAPC 0.14868246520739 0.0706556543021115 0.262333333333333 0.456333333333333 16.7058520279446 15.2998485076219 0.262333333333333 0.456333333333333 0.0213508317006784 0.0295131217374961 3.2049222129911 2.93291852178142 Q02040 AKAP17A Q02040.S515.p_AKAP17A Q02040_S515s _1_1_515_515 Q02040 Q02040 A-kinase anchor protein 17A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11220.11220.3 11.89 11.89 3.228 2 1 1 0 629.3107 1805.9468 S515s TMT10 511 (K) SVNGsVAEEAPCK (E) S(0.0)VNGS(0.99)VAEEAPCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AKAP17A 81361.6 1 2 1803.1 114.1 HUMAN 1 16.7059 15.2998 APLAKQQSYQASEYA-p Q7Z7G8;S1010-p APLAKQQSYQASEYA 0.815882402475188 0.558849869636397 0.0356666666666667 -0.0756666666666667 1.69649833870491 3.40807951374425 0.0356666666666667 -0.0756666666666667 0.67662831233505 0.45623862385689 0.440488658318024 -0.802024459833027 Q7Z7G8 VPS13B Q7Z7G8.S1010.p_VPS13B Q7Z7G8_S1010s _1_1_1010_1010 Q7Z7G8 Q7Z7G8|Q7Z7G8-6|Q7Z7G8-2|Q7Z7G8-3 Vacuolar protein sorting-associated protein 13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12788.12788.3 13.68 13.68 4.337 6 1 1 0 737.6966 2131.1072 S1010s TMT10 1008 (K) QQsYQASEYASSPVK (T) QQS(0.99)Y(0.0)QAS(0.0)EY(0.0)AS(0.0)S(0.0)PVK K:TMT10,s:Phosphorylated S VPS13B 454589.9 1 5 766.1 229.13 HUMAN 1 1.6965 -3.4081 APLAQPESPTASAGD-p Q6GQQ9;S449-p APLAQPESPTASAGD 0.440361201395823 0.0970391101962841 0.119 0.204666666666667 6.56194827285099 13.3936736735572 0.119 0.204666666666667 0.220701443010391 0.0457754510830613 1.38409494390188 2.58078516150923 Q6GQQ9 OTUD7B Q6GQQ9.S449.p_OTUD7B Q6GQQ9_S449s _1_1_449_449 Q6GQQ9 Q6GQQ9|Q6GQQ9-2 OTU domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27419.27419.3 22.66 22.66 2.048 5 1 1 0 1034.1674 3020.5163 S449s TMT10 433 (K) WIPLSSDAQAPLAQPEsPTASAGDEPR (S) WIPLS(0.0)S(0.0)DAQAPLAQPES(0.99)PT(0.0)AS(0.0)AGDEPR s:Phosphorylated S OTUD7B 93208.9 3 3 1645.1 123.96 HUMAN 1 6.5619 13.3937 APLARASSLEDLVLK-p Q15477;S256-p APLARASSLEDLVLK 0.631031345310448 0.280206374359103 0.074 0.124 3.72082682264844 7.28113090480839 0.074 0.124 0.424538731315717 0.187019507730313 0.863374508277066 1.50970546275388 Q15477 SKIV2L Q15477.S256.p_SKIV2L Q15477_S256s _1_1_256_256 Q15477 Q15477 Helicase SKI2W HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26834.27465.2 12.15 5.06 1.124 2 1 1 0 806.951 1532.93 S256s TMT10 254 (R) ASsLEDLVLK (E) AS(0.0)S(0.99)LEDLVLK K:TMT10,s:Phosphorylated S SKIV2L 138722.7 10 2 2186.1 94.08 HUMAN 1 3.7208 7.2811 APLEPLGSPDAGLGA-p O95219;S22-p APLEPLGSPDAGLGA 0.370851613276491 0.320613906618643 -0.165333333333333 0.109333333333333 7.98794684561456 6.53313020667067 -0.165333333333333 0.109333333333333 0.158929792157731 0.222170800245829 -1.63306963139629 1.37866047715802 O95219 SNX4 O95219.S22.p_SNX4 O95219_S22s _1_1_22_22 O95219 O95219 Sorting nexin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29900.29900.4 14.27 14.27 99 1 1 1 0 922.7136 3607.8628 S22s Acetyl 1 (-) MEQAPPDPERQLQPAPLEPLGsPDAGLGAAVGK (E) MEQAPPDPERQLQPAPLEPLGS(1.0)PDAGLGAAVGK K:TMT10,s:Phosphorylated S SNX4 52193.2 5 1 3500.1 49.67 HUMAN 1 -7.9879 6.5331 APLHKSQSVPGAWPG-p Q9HBL0;S733-p APLHKSQSVPGAWPG 0.237912707669171 0.242334169201215 0.288666666666667 -0.135666666666667 11.9425697373859 8.10977241707129 0.288666666666667 -0.135666666666667 0.0639356413853498 0.154533541748313 2.32215219440808 -1.65366624356458 Q9HBL0 TNS1 Q9HBL0.S733.p_TNS1 Q9HBL0_S733s _1_1_733_733 Q9HBL0 Q9HBL0|E9PF55|E9PGF5|A0A087WWW7 Tensin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22178.22178.3 20.96 20.96 1.1 8 1 1 0 883.7675 2569.3208 S733s TMT10 731 (K) SQsVPGAWPGASPLSSQPLSGSSR (Q) S(0.0)QS(0.99)VPGAWPGAS(0.0)PLS(0.0)S(0.0)QPLS(0.0)GS(0.0)S(0.0)R s:Phosphorylated S TNS1 186610.9 1 30 183.2 477.16 HUMAN 1 11.9426 -8.1098 APLIPLPTPPIIPVL-p Q6NXG1;T426-p APLIPLPTPPIIPVL 0.834583820338347 0.193360795955699 0.0406666666666667 0.298 1.51454470879219 9.38290437989252 0.0406666666666666 0.298 0.705578809298547 0.115268213439079 0.398392721834549 1.8739627412235 Q6NXG1 ESRP1 Q6NXG1.T426.p_ESRP1 Q6NXG1_T426t _1_1_426_426 Q6NXG1 Q6NXG1|Q6NXG1-3|Q6NXG1-4|Q6NXG1-5|Q6NXG1-2 Epithelial splicing regulatory protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.37491.37491.4 20.81 20.81 9.117 4 1 1 0 861.9871 3364.9598 T426t TMT10 416 (R) FSSAPLIPLPtPPIIPVLPQQFVPPTNVR (D) FS(0.0)S(0.0)APLIPLPT(0.99)PPIIPVLPQQFVPPT(0.0)NVR t:Phosphorylated T ESRP1 76496.9 3 1 1809.1 113.42 HUMAN 1 1.5145 9.3829 APLNIPGTPVLEDFP-p Q15003;T49-p APLNIPGTPVLEDFP 0.793063985790372 0.13826459791717 -0.042 -0.173666666666667 1.94262391553169 11.3210280220612 -0.042 -0.173666666666667 0.639348437945351 0.0737729580879785 -0.49605786794187 -2.21141848846686 Q15003 NCAPH Q15003.T49.p_NCAPH Q15003_T49t _1_1_49_49 Q15003 Q15003|E9PHA2 Condensin complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25908.25908.3 19.65 20.19 99 1 1 1 0 1068.8953 3124.7133 T49t TMT10 41 (R) KAPLNIPGtPVLEDFPQNDDEK (E) KAPLNIPGT(1.0)PVLEDFPQNDDEK K:TMT10,t:Phosphorylated T NCAPH 83360.5 7 2 558.1 272.98 HUMAN 1 -1.9426 -11.321 APLPPHDSPPHKRRK-p Q86VE0;S378-p APLPPHDSPPHKRRK 0.60357044469146 0.471402665453701 -0.0713333333333333 -0.0713333333333333 4.04882107563421 4.3533951734423 -0.0713333333333333 -0.0713333333333333 0.393656922024548 0.366995283309434 -0.926450359663984 -0.983929227619027 Q86VE0 MYPOP Q86VE0.S378.p_MYPOP Q86VE0_S378s _1_1_378_378 Q86VE0 Q86VE0 Myb-related transcription factor, partner of profilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10433.10433.5 17.82 12.95 17.566 2 1 1 0 570.4971 2768.4884 S378s TMT10 361 (R) SEEGAPRPPPAPLPPHDsPPHK (R) S(0.0)EEGAPRPPPAPLPPHDS(0.99)PPHK K:TMT10,s:Phosphorylated S MYPOP 42678.8 3 3 3859.1 41.6 HUMAN 1 -4.0488 -4.3534 APLPPQRSPRTRGLC-p Q9BST9;S543-p APLPPQRSPRTRGLC 0.598415328448943 0.0101040429128612 0.0783333333333333 -0.404333333333333 4.11973033844444 28.0341978577134 0.0783333333333333 -0.404333333333333 0.387281691218642 0.00157246219954833 0.93994807197492 -5.84713782472019 Q9BST9 RTKN Q9BST9.S543.p_RTKN Q9BST9_S543s _1_1_543_543 Q9BST9 Q9BST9|Q9BST9-2|Q9BST9-3 Rhotekin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8655.9276.3 13.64 11.32 8.511 2 1 1 0 538.6297 1533.9063 S543s TMT10 534 (R) SVAPLPPQRsPR (T) S(0.0)VAPLPPQRS(0.99)PR s:Phosphorylated S RTKN 63465.1 13 9 1486.1 137.99 HUMAN 1 4.1197 -28.0342 APLQRIRSTSTPNVH-p Q96II5;S215-p APLQRIRSTSTPNVH 0.659595024833796 0.10543688020082 0.063 0.178666666666667 3.38956322594603 12.9081093434535 0.063 0.18028671418523 0.45818796479293 0.0511904639480956 0.798484751227083 2.49316547408908 Q96II5 ARAF Q96II5.S215.p_ARAF Q96II5_S215s _1_1_215_215 Q96II5 Q96II5|P10398 ARAF protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23923.23923.4 11.9 11.9 1.297 13 1 1 0 1005.4753 3938.9062 S215s TMT10 215 (R) sTSTPNVHMVSTTAPMDSNLIQLTGQSFSTDAAGSR (G) S(0.99)T(0.0)S(0.0)T(0.0)PNVHMVS(0.0)T(0.0)T(0.0)APMDS(0.0)NLIQLT(0.0)GQS(0.0)FS(0.0)T(0.0)DAAGS(0.0)R s:Phosphorylated S ARAF 68723.3 46 33 441.2 311.96 HUMAN 1 3.3896 12.9081 APLRRGDSVDGPPDG-p A0A140LJL2;S641-p APLRRGDSVDGPPDG 0.687777093309933 0.581775966742634 -0.0896666666666667 0.077 3.05289612174909 3.17522137663865 -0.0896666666666667 0.077 0.49511990667541 0.481368716155709 -0.731135769859799 0.755672808650096 A0A140LJL2 NotFound A0A140LJL2.S641.p_NotFound A0A140LJL2_S641s _1_1_641_641 A0A140LJL2 A0A140LJL2|Q8N350 Voltage-dependent calcium channel beta subunit-associated regulatory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4679.4679.3 13.55 13.55 99 1 1 1 0 512.9054 1456.7342 S641s TMT10 638 (R) RGDsVDGPPDGR (T) RGDS(1.0)VDGPPDGR s:Phosphorylated S CBARP 76276.7 2 4 1993.1 103.67 HUMAN 1 -3.0529 3.1752 APLTRVLTPPHDVDS-p Q9P1Y5;T799-p APLTRVLTPPHDVDS 0.769111039821672 0.0095308585684715 -0.0416666666666667 -0.412666666666667 2.1870898365301 28.5088468895932 -0.0416666666666667 -0.412666666666667 0.604353464877434 0.00140966303327976 -0.549847044637587 -5.98209049795368 Q9P1Y5 CAMSAP3 Q9P1Y5.T799.p_CAMSAP3 Q9P1Y5_T799t _1_1_799_799 Q9P1Y5 Q9P1Y5-2 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18831.18831.4 18.87 18.87 5.864 2 1 1 0 502.0172 1925.0806 T799t TMT10 797 (R) VLtPPHDVDSLPHLR (K) VLT(0.99)PPHDVDS(0.0)LPHLR t:Phosphorylated T CAMSAP3 135546 2 18 217.1 432.4 HUMAN 1 -2.1871 -28.5088 APLVPPGSPVVNALF-p Q9NPH2;S473-p APLVPPGSPVVNALF 0.827264797305235 0.67526106721046 -0.0343333333333333 0.044 1.5848219975983 2.33072090565524 -0.0343333333333333 0.044 0.694253056180855 0.584693020168676 -0.414760061218108 0.580786102720371 Q9NPH2 ISYNA1 Q9NPH2.S473.p_ISYNA1 Q9NPH2_S473s _1_1_473_473 Q9NPH2 Q9NPH2|Q9NPH2-3|Q9NPH2-2 Inositol-3-phosphate synthase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32945.32945.3 16.8 16.8 99 1 1 1 0 648.363 1863.1054 S473s TMT10 466 (K) APLVPPGsPVVNALFR (Q) APLVPPGS(1.0)PVVNALFR s:Phosphorylated S ISYNA1 61580.2 3 4 3499.1 49.68 HUMAN 1 -1.5848 2.3307 APLVPPLSPQYK___-p Q6ZW13;S313-p APLVPPLSPQYK___ 0.967118235264334 0.0506441663241141 0.00633333333333333 0.244333333333333 0.282034187085733 17.3083617650962 0.00633333333333333 0.244333333333333 0.937122966130844 0.0185850538368654 0.0826211986257665 3.32103003342441 Q6ZW13 C16orf86 Q6ZW13.S313.p_C16orf86 Q6ZW13_S313s _1_1_313_313 Q6ZW13 Q6ZW13 Uncharacterized protein C16orf86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31322.31518.3 15.38 14.07 5.75 4 1 1 0 847.1219 2459.3806 S313s TMT10 300 (K) MLSVCTAPLVPPLsPQYK (-) MLS(0.0)VCT(0.0)APLVPPLS(0.99)PQY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C16orf86 33738.4 6 2 5036.1 23.67 HUMAN 1 0.282 17.3084 APLVPVYSGKVKSSL-p Q8NCF5;S127-p APLVPVYSGKVKSSL 0.358816130593979 0.00825803939985841 0.134 -0.602333333333333 8.27048592904436 29.6359219538703 0.134 -0.602333333333333 0.148919444346885 0.00108744626163413 1.68205305464209 -6.31226647093772 Q8NCF5 NFATC2IP Q8NCF5.S127.p_NFATC2IP Q8NCF5_S127s _1_1_127_127 Q8NCF5 Q8NCF5 NFATC2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31964.31964.3 17.41 17.41 4.796 2 1 1 0 764.7596 2212.2993 S127s TMT10 113 (R) LVLDPGEAPLVPVYsGK (V) LVLDPGEAPLVPVY(0.0)S(0.99)GK K:TMT10,s:Phosphorylated S NFATC2IP 45987.1 1 3 477.1 300.69 HUMAN 1 8.2705 -29.6359 APMPKLATQSNEITI-p P04792;T174-p APMPKLATQSNEITI 0.738786253352318 0.0999884605488376 -0.0643333333333333 -0.179333333333333 2.49386636230297 13.2186655478818 -0.0643333333333334 -0.179333333333333 0.563136093471141 0.0476577401750317 -0.615592946041521 -2.54911813815184 P04792 HSPB1 P04792.T174.p_HSPB1 P04792_T174t _1_1_174_174 P04792 P04792|C9J3N8 Heat shock protein beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27498.27498.2 14.46 14.46 2.376 5 1 1 0 1108.0608 2135.1546 T174t TMT10 172 (K) LAtQSNEITIPVTFESR (A) LAT(0.99)QS(0.0)NEIT(0.0)IPVT(0.0)FES(0.0)R t:Phosphorylated T HSPB1 22839.1 2 12 357.1 346.69 HUMAN 1 -2.4939 -13.2187 APNAQRRTPDSTFSE-p Q9NZI5;T208-p APNAQRRTPDSTFSE 0.371512080146296 0.249861105551801 -0.204333333333333 0.138333333333333 7.97536793866892 7.93523934676767 -0.204333333333333 0.138333333333333 0.159390783751089 0.160870371716178 -1.63088729994999 1.62341414159101 Q9NZI5 GRHL1 Q9NZI5.T208.p_GRHL1 Q9NZI5_T208t _1_1_208_208 Q9NZI5 Q9NZI5|Q9NZI5-3|B7Z1S6 Grainyhead-like protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12953.12953.3 14.92 13.61 3.791 5 1 1 0 575.6092 1644.8431 T208t Hydrogen 207 (R) RtPDSTFSETFK (E) RT(0.99)PDS(0.0)T(0.0)FS(0.0)ET(0.0)FK K:TMT10-Lys-Only,t:Phosphorylated T GRHL1 70397.2 6 2 2089.1 98.03 HUMAN 1 -7.9754 7.9352 APNASQPTPPPLPKK-p Q9H792;T1151-p APNASQPTPPPLPKK 0.349857673074694 0.243472409131899 0.193 -0.139666666666667 8.47404199256883 8.08262451235015 0.193 -0.139666666666667 0.142100563701818 0.15550256202702 1.71731166290043 -1.64896243442077 Q9H792 PEAK1 Q9H792.T1151.p_PEAK1 Q9H792_T1151t _1_1_1151_1151 Q9H792 Q9H792 Pseudopodium-enriched atypical kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23465.23465.4 20.15 20.15 2.947 3 1 1 0 939.9928 3676.979 T1151t TMT10 1128 (K) GAVDDAIAFGGKTDQEAPNASQPtPPPLPK (K) GAVDDAIAFGGKT(0.0)DQEAPNAS(0.0)QPT(0.99)PPPLPK K:TMT10,t:Phosphorylated T PEAK1 195156.9 4 13 583.1 265.81 HUMAN 1 8.474 -8.0826 APNKSEISKHIEVQV-p O60271;S314-p APNKSEISKHIEVQV 0.0393880886227965 0.00291898217600941 -0.514666666666667 -0.945 31.6495409915687 38.2701378414127 -0.514666666666667 -0.945 0.000683983934131781 0.00014893138073942 -6.95012845097872 -9.37986955004345 O60271 SPAG9 O60271.S314.p_SPAG9 O60271_S314s _1_1_314_314 O60271 O60271|A0A087X2D8|O60271-2|O60271-4 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11664.11664.3 13.79 13.79 2.207 3 1 1 0 686.0483 1976.1631 S314s TMT10 304 (K) VTDAPNKSEIsK (H) VT(0.0)DAPNKS(0.0)EIS(0.99)K K:TMT10,s:Phosphorylated S SPAG9 147001.6 2 23 84.1 629.25 HUMAN 1 -31.6495 -38.2701 APNKSLPSAVYCIED-p O43290;S670-p APNKSLPSAVYCIED 0.442021017212263 0.221044281466237 0.107666666666667 0.185666666666667 6.53387929352544 8.63157595692721 0.107666666666667 0.185666666666667 0.222132482726053 0.137038439427464 1.37914829063609 1.74398778638027 O43290 SART1 O43290.S670.p_SART1 O43290_S670s _1_1_670_670 O43290 O43290 U4/U6.U5 tri-snRNP-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25068.25068.3 12.01 12.01 3.031 3 1 1 0 640.6581 1839.9927 S670s TMT10 667 (K) SLPsAVYCIEDK (M) S(0.0)LPS(0.99)AVY(0.0)CIEDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SART1 90424.4 1 6 2155.1 95.34 HUMAN 1 6.5339 8.6316 APNVANNTGPHAASC-p O60716-3;T611-p APNVANNTGPHAASC 0.440068885655225 0.287758295449411 0.115333333333333 0.121666666666667 6.56859244595114 7.1380431477655 0.115333333333333 0.121666666666667 0.220364055008945 0.193283902307774 1.3852655158016 1.48473762061963 O60716 CTNND1 O60716.3.T611.p_CTNND1 O60716-3_T611t _1_1_611_611 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-21|O60716-23|O60716-24|O60716-25|O60716-26|O60716-28|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-30|O60716-27|O60716-29|O60716-31|O60716-32 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13773.13773.4 17.74 17.74 5.934 3 1 1 0 729.0978 2833.4092 T611t TMT10 600 (R) YQEAAPNVANNtGPHAASCFGAK (K) Y(0.0)QEAAPNVANNT(0.99)GPHAAS(0.0)CFGAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CTNND1 105545.3 3 26 21.1 1014.17 HUMAN 1 6.5686 7.138 APPADFPSPRKSSGD-p Q8NG08;S967-p APPADFPSPRKSSGD 0.865204150008702 0.143989240224038 0.0513333333333333 -0.260333333333333 1.22300763769117 11.0866279487663 0.0513333333333333 -0.260333333333333 0.754569481525981 0.0778640887041138 0.328918574032436 -2.17030544536289 Q8NG08 HELB Q8NG08.S967.p_HELB Q8NG08_S967s _1_1_967_967 Q8NG08 Q8NG08 DNA helicase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15593.15593.4 12.99 12.99 1.805 4 1 1 0 538.7867 2072.1541 S967s TMT10 955 (K) LSSSGAPPADFPsPRK (S) LS(0.0)S(0.0)S(0.0)GAPPADFPS(0.99)PRK K:TMT10,s:Phosphorylated S HELB 124961.8 5 2 2553.1 78.8 HUMAN 1 1.223 -11.0866 APPAEPHSPSPTASP-p Q9HA65;S602-p APPAEPHSPSPTASP 0.350515030702297 0.140717506198093 0.142333333333333 0.198333333333333 8.45788823180821 11.2217043167278 0.142333333333333 0.198333333333333 0.142630096755899 0.0754795962369237 1.71451431823089 2.19398425917314 Q9HA65 TBC1D17 Q9HA65.S602.p_TBC1D17 Q9HA65_S602s_1_1_602_602 Q9HA65 Q9HA65|Q9HA65-2 TBC1 domain family member 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.35264.35264.4 18.88 18.88 1.432 7 1 1 0 1071.5386 4220.1809 Q577q S602s Hydrogen 577 (R) qLTACPELPHNVQEILGLAPPAEPHsPSPTASPLPLSPTR (A) Q(1.0)LT(0.0)ACPELPHNVQEILGLAPPAEPHS(0.99)PS(0.0)PT(0.0)AS(0.0)PLPLS(0.0)PT(0.0)R C:Carbamidomethylation,q:Pyroglutamic acid,s:Phosphorylated S TBC1D17 73411.6 4 3 3440.1 50.97 HUMAN 1 8.4579 11.2217 APPAPAASPAASSRP-p P27694;S135-p APPAPAASPAASSRP 0.197771061122644 0.00641043877505925 -0.200333333333333 -0.543333333333333 13.7155684575738 31.5422257985385 -0.200333333333333 -0.543333333333333 0.0425053067034977 0.000701095888337247 -2.64084325356814 -6.90373252633852 P27694 RPA1 P27694.S135.p_RPA1 P27694_S135s_1_1_135_135 P27694 P27694 Replication protein A 70 kDa DNA-binding subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21102.21102.5 31.02 31.02 2.385 9 1 1 0 999.9046 4914.5209 S135s N146n TMT10 112 (K) IGNPVPYNEGLGQPQVAPPAPAAsPAASSRPQPQnGSSGMGSTVSK (A) IGN(0.0)PVPY(0.0)N(0.0)EGLGQPQVAPPAPAAS(0.99)PAAS(0.0)S(0.0)RPQPQN(0.99)GS(0.0)S(0.0)GMGS(0.0)T(0.0)VS(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated RPA1 68764.6 2 3 1852.1 110.98 HUMAN 1 -13.7156 -31.5422 APPAPEATPPPASAA-p Q9NSI2;T34-p APPAPEATPPPASAA 0.100270895222429 0.0228330375005169 -0.458333333333333 -0.360666666666667 21.131481275272 22.4099128654035 -0.458333333333333 -0.360666666666667 0.00770640577046551 0.00574127981098352 -4.1260966484539 -4.41152315741656 Q9NSI2 FAM207A Q9NSI2.T34.p_FAM207A Q9NSI2_T34t _1_1_34_34 Q9NSI2 Q9NSI2|Q9NSI2-2 Protein FAM207A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14431.14431.4 18.82 18.82 7.29 2 1 1 0 662.5938 2567.387 T34t TMT10 20 (K) GEAAPGPAPPAPEAtPPPASAAGK (D) GEAAPGPAPPAPEAT(0.99)PPPAS(0.0)AAGK K:TMT10,t:Phosphorylated T FAM207A 25455.8 2 1 3498.1 49.73 HUMAN 1 -21.1315 -22.4099 APPDAELSPRWSSSA-p A0A0J9YWL0;S212-p APPDAELSPRWSSSA 0.539507901385774 0.0820561909586788 -0.0946666666666667 -0.244 4.95250556885876 14.3931551719382 -0.0946666666666667 -0.244 0.319705010804123 0.036365074598151 -1.09534725810679 -2.76367807776275 A0A0J9YWL0 NotFound A0A0J9YWL0.S212.p_NotFound A0A0J9YWL0_S212s _1_1_212_212 A0A0J9YWL0 A0A0J9YWL0 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12758.12758.3 19.05 15.45 5.765 2 1 1 0 951.4307 2772.3071 S212s Hydrogen 188 (R) ENPREAEGELPESGGPAAPPDAELsPR (W) ENPREAEGELPES(0.0)GGPAAPPDAELS(0.99)PR s:Phosphorylated S CRYBG1 233643.7 2 5 79.1 640.71 HUMAN 1 -4.9525 -14.3932 APPGPDASPDASFGK-p O00562;S300-p APPGPDASPDASFGK 0.495458193368512 0.382834402822501 0.093 0.093 5.61796464283069 5.54001002771014 0.093 0.093 0.274285933456728 0.279253739335715 1.21619509286164 1.20189637600055 O00562 PITPNM1 O00562.S300.p_PITPNM1 O00562_S300s _1_1_300_300 O00562 O00562|O00562-2 Membrane-associated phosphatidylinositol transfer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16749.16749.3 20.44 20.44 3.729 6 1 1 0 1046.1591 3056.4849 S300s TMT10 280 (R) SAASNTGTPDGPEAPPGPDAsPDASFGK (Q) S(0.0)AAS(0.0)NT(0.0)GT(0.0)PDGPEAPPGPDAS(0.99)PDAS(0.0)FGK K:TMT10,s:Phosphorylated S PITPNM1 135986.3 1 1 1747.1 117.75 HUMAN 1 5.618 5.54 APPGPHPSPAAPEPL-p Q6ZUM4;S84-p APPGPHPSPAAPEPL 0.588016328588642 0.338097310306139 0.0886666666666667 -0.115 4.24694296423196 6.23961491768834 0.0886666666666667 -0.115 0.376102052564656 0.237705104678177 0.964048356152842 -1.32681132666159 Q6ZUM4 ARHGAP27 Q6ZUM4.S84.p_ARHGAP27 Q6ZUM4_S84s _1_1_84_84 Q6ZUM4 Q6ZUM4|A0A0G2JNY3 Rho GTPase-activating protein 27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24717.24717.4 21.49 21.49 6.47 3 1 1 0 854.9276 3336.7214 S84s TMT10 66 (R) ELPALGNPAAAAPPGPHPsPAAPEPLAYDYR (F) ELPALGNPAAAAPPGPHPS(0.99)PAAPEPLAY(0.0)DY(0.0)R s:Phosphorylated S ARHGAP27 99078.8 2 2 467.1 303.27 HUMAN 1 4.2469 -6.2396 APPPAKGSARAKEAE-p Q9P253;S912-p APPPAKGSARAKEAE 0.223329192805893 0.880408004928769 -0.227 -0.0193333333333333 12.5130846597713 0.777551064274106 -0.227 -0.0193333333333333 0.0560649622443338 0.836074337861316 -2.42368630118143 -0.217088515973108 Q9P253 VPS18 Q9P253.S912.p_VPS18 Q9P253_S912s _1_1_912_912 Q9P253 Q9P253 Vacuolar protein sorting-associated protein 18 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9279.9279.3 11.83 8.51 99 1 1 1 0 577.6615 1651.0055 S912s TMT10 902 (K) LGAAPPPAKGsAR (A) LGAAPPPAKGS(1.0)AR K:TMT10,s:Phosphorylated S VPS18 111552.9 2 4 3559.1 48.24 HUMAN 1 -12.5131 -0.7776 APPPEPRSLTAEEVK-p Q6PL18;S969-p APPPEPRSLTAEEVK 0.866485341661485 0.011732483454555 -0.0426666666666667 -0.533 1.21161114543959 26.9866782866729 -0.0426666666666667 -0.533 0.7565521772671 0.00200139205460988 -0.326147801676595 -5.55752092427234 Q6PL18 ATAD2 Q6PL18.S969.p_ATAD2 Q6PL18_S969s _1_1_969_969 Q6PL18 Q6PL18|A0A0B4J211 ATPase family AAA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13694.13694.2 11.66 11.66 2.172 2 1 1 0 707.8861 1334.7932 S969s TMT10 969 (R) sLTAEEVK (R) S(0.99)LT(0.0)AEEVK K:TMT10,s:Phosphorylated S ATAD2 159920.6 1 12 266.1 395.28 HUMAN 1 -1.2116 -26.9867 APPPKAQSVSPVQAP-p I3L2J0;S1811-p APPPKAQSVSPVQAP 0.92648668397199 0.0284867686798241 0.0183333333333333 0.285666666666667 0.654993653410075 20.9320056365198 0.0183333333333333 0.285666666666667 0.860004323660704 0.00806862323171513 0.184947818349136 4.07784061114208 I3L2J0 NotFound I3L2J0.S1811.p_NotFound I3L2J0_S1811sS1813s_2_2_1811_1813 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22391.22391.3 17.35 17.35 9.427 3 2 2 0 902.1349 2544.455 S1811s S1813s TMT10 1809 (K) AQsVsPVQAPPPGGSAQLLPGK (V) AQS(0.99)VS(0.99)PVQAPPPGGS(0.0)AQLLPGK K:TMT10,s:Phosphorylated S CIC 259056.7 1 49 23.1 999.57 HUMAN 1 0.655 20.932 APPPKPETPEKTTSE-p Q9ULL5-3;T1705-p APPPKPETPEKTTSE 0.14431928003453 0.0513969838193508 -0.413666666666667 -0.313 17.1604423410204 17.20677481075 -0.413666666666667 -0.313 0.019228958666385 0.0190249059684195 -3.29430238989345 -3.30091885500968 Q9ULL5 PRR12 Q9ULL5.3.T1705.p_PRR12 Q9ULL5-3_T1705t _1_1_1705_1705 Q9ULL5-3 Q9ULL5-3|Q9ULL5-2 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11639.11639.3 10.67 10.67 99 1 1 1 0 709.4 2046.2202 T1705t TMT10 1696 (K) APAPPPKPEtPEK (T) APAPPPKPET(1.0)PEK K:TMT10,t:Phosphorylated T PRR12 212010 2 19 182.1 477.91 HUMAN 1 -17.1604 -17.2068 APPPPALTPDSQTVD-p Q9H7N4;T989-p APPPPALTPDSQTVD 0.718947568381735 0.287965806513013 -0.058 0.113666666666667 2.70482226666087 7.13437432393032 -0.058 0.113666666666667 0.536435824419985 0.193447253266181 -0.659793083611519 1.48409689361581 Q9H7N4 SCAF1 Q9H7N4.T989.p_SCAF1 Q9H7N4_T989t _1_1_989_989 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15594.15594.3 15.68 15.68 3.549 5 1 1 0 859.7623 2497.3009 T989t TMT10 981 (K) AAPPPPALtPDSQTVDSSCK (T) AAPPPPALT(0.99)PDS(0.0)QT(0.0)VDS(0.0)S(0.0)CK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T SCAF1 139895 3 22 76.1 647.25 HUMAN 1 -2.7048 7.1344 APPPVLLTPKAVGTP-p P48634;T1347-p APPPVLLTPKAVGTP 0.407721188042632 0.0173712533161807 -0.124 -0.424333333333333 7.19501776285644 24.263841807015 -0.124 -0.424333333333333 0.190764792160093 0.00374641444515382 -1.4951087198468 -4.85388736109119 P48634 PRRC2A P48634.T1347.p_PRRC2A P48634_T1347t _1_1_1347_1347 P48634 P48634|P48634-3|P48634-2 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20698.20903.2 13.17 13.17 99 1 1 1 0 850.4933 1620.0137 T1347t TMT10 1339 (K) EAPPPVLLtPK (A) EAPPPVLLT(1.0)PK K:TMT10,t:Phosphorylated T PRRC2A 229315.4 5 28 36.1 882.05 HUMAN 1 -7.195 -24.2638 APPQPAVSARGGFPK-p Q6ZSJ8;S94-p APPQPAVSARGGFPK 0.622367418688865 0.0436038008077987 0.106333333333333 -0.370333333333333 3.82706431961948 18.2233650617678 0.106333333333333 -0.370333333333333 0.41427961887622 0.0150544014778944 0.883925040321081 -3.50469773503298 Q6ZSJ8 C1orf122 Q6ZSJ8.S94.p_C1orf122 Q6ZSJ8_S94s _1_1_94_94 Q6ZSJ8 Q6ZSJ8|Q6ZSJ8-2 Uncharacterized protein C1orf122 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.6673.6673.4 13.22 13.22 8.785 2 1 1 0 766.4166 2982.675 S94s TMT10 71 (R) RRPEPAGGGNVSAKPGAPPQPAVsAR (G) RRPEPAGGGNVS(0.0)AKPGAPPQPAVS(0.99)AR K:TMT10,s:Phosphorylated S C1orf122 11527.6 1 2 6200.1 13.22 HUMAN 1 3.8271 -18.2234 APPRFCDSPTSDLEM-p O15014;S358-p APPRFCDSPTSDLEM 0.555257865715118 0.0176882772483681 0.140666666666667 0.433333333333333 4.71793634587824 24.1405052272453 0.140666666666667 0.433333333333333 0.337447616876219 0.00385433516469496 1.05210538098445 4.82358295579594 O15014 ZNF609 O15014.S358.p_ZNF609 O15014_S358s _1_1_358_358 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13736.13736.2 12.83 12.83 2.754 3 1 1 0 769.2878 1457.6035 S358s Hydrogen 355 (R) FCDsPTSDLEMR (N) FCDS(0.99)PT(0.0)S(0.0)DLEMR C:Carbamidomethylation,s:Phosphorylated S ZNF609 152443.5 5 4 63.1 699.07 HUMAN 1 4.7179 24.1405 APPRRKGSQITQQST-p P50750-2;S464-p APPRRKGSQITQQST 0.13430679397205 0.018662450602294 0.264666666666667 0.351666666666667 17.8879160462957 23.7906300669131 0.264666666666667 0.351666666666667 0.0162632895936378 0.00417769752937615 3.43961711384355 4.73831378642056 P50750 CDK9 P50750.2.S464.p_CDK9 P50750-2_S464s _1_1_464_464 P50750-2 P50750-2 Isoform 2 of Cyclin-dependent kinase 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3986.3986.3 14.72 14.72 3.192 5 1 1 0 624.6442 1791.9511 S464s Hydrogen 462 (R) KGsQITQQSTNQSR (N) KGS(0.99)QIT(0.0)QQS(0.0)T(0.0)NQS(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S CDK9 53763.6 2 3 1462.1 140.18 HUMAN 1 17.8879 23.7906 APPRRMASPPAPSPA-p Q00587;S101-p APPRRMASPPAPSPA 0.755115471714797 0.0198070948003416 -0.047 -0.448 2.33124627048552 23.3650310933179 -0.047 -0.448 0.584622294294117 0.00460783469698738 -0.580970503538281 -4.63595541999144 Q00587 CDC42EP1 Q00587.S101.p_CDC42EP1 Q00587_S101s _1_1_101_101 Q00587 Q00587|Q00587-2 Cdc42 effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27260.27260.3 16.61 16.61 1.359 3 1 1 0 794.1089 2300.3452 S101s TMT10 99 (R) MAsPPAPSPAPPAISPIIK (N) MAS(0.99)PPAPS(0.0)PAPPAIS(0.0)PIIK K:TMT10,s:Phosphorylated S CDC42EP1 40408.2 5 1 1362.1 149.93 HUMAN 1 -2.3312 -23.365 APPTQQSSAE_____-p P16989;S370-p APPTQQSSAE_____ 0.689454079566116 0.31520680144833 0.0703333333333333 0.135666666666667 3.02884976504496 6.62623994133005 0.0703333333333333 0.135666666666667 0.497868928794539 0.217458308659607 0.726265943462692 1.39505141927117 P16989 YBX3 P16989.S370.p_YBX3 P16989_S369sS370s_2_2_369_370 P16989 P16989 Y-box-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11703.11703.3 10.19 10.19 1.368 4 2 2 0 757.6526 2111.009 S369s S370s TMT10 354 (K) AGEAPTENPAPPTQQssAE (-) AGEAPT(0.0)ENPAPPT(0.0)QQS(0.99)S(0.99)AE s:Phosphorylated S YBX3 40089.2 1 8 929.1 199.34 HUMAN 1 3.0288 6.6262 APPVDDLSPKKVKVV-p Q92576;S1133-p APPVDDLSPKKVKVV 0.3003315009562 0.00387979257248964 -0.146333333333333 -0.804 9.82075054929564 35.6056921616523 -0.146333333333333 -0.804 0.104213731128235 0.000275062118674906 -1.95058487730094 -8.31988428052035 Q92576 PHF3 Q92576.S1133.p_PHF3 Q92576_S1133s _1_1_1133_1133 Q92576 Q92576|Q92576-2 PHD finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19128.19362.3 15.11 15.11 99 1 1 1 0 569.965 1627.913 S1133s TMT10 1125 (R) MAPPVDDLsPK (K) MAPPVDDLS(1.0)PK K:TMT10,s:Phosphorylated S PHF3 231702.4 16 7 96.1 606.54 HUMAN 1 -9.8208 -35.6057 APPVQRPSPADRVAE-p Q9HCM3;S1503-p APPVQRPSPADRVAE 0.421878857228085 0.571651453434328 -0.118666666666667 -0.0773333333333333 6.90508165029832 3.27378098123576 -0.118666666666667 -0.0773333333333333 0.203935031808366 0.470567470511923 -1.44438781525361 -0.775377615867471 Q9HCM3 KIAA1549 Q9HCM3.S1503.p_KIAA1549 Q9HCM3_S1503s _1_1_1503_1503 Q9HCM3 Q9HCM3|Q9HCM3-2|Q9HCM3-4|Q9HCM3-3 UPF0606 protein KIAA1549 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25200.25200.4 17.14 12.07 1.195 2 1 1 0 891.2391 3481.9718 S1503s TMT10 1486 (K) IQLIAMQPIPAPPVQRPsPADRVAESNK (I) IQLIAMQPIPAPPVQRPS(0.99)PADRVAES(0.0)NK K:TMT10,s:Phosphorylated S KIAA1549 211379.1 2 1 5688.1 17.14 HUMAN 1 -6.9051 -3.2738 APQNFTPSVIFQKVV-p O00203;S1020-p APQNFTPSVIFQKVV 0.992400468359452 0.0130777400522245 0.00199999999999999 0.417 0.0712473445228585 26.2312568350022 0.00199999999999999 0.417 0.983728526849986 0.00238163013311143 0.0213540643275896 5.35541164581814 O00203 AP3B1 O00203.S1020.p_AP3B1 O00203_S1020s _1_1_1020_1020 O00203 O00203|O00203-3 AP-3 complex subunit beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.36604.36604.4 27.51 27.51 2.862 5 1 1 0 932.9885 3648.9711 S1020s TMT10 996 (K) EQGVLTGMNETSAVIIAAPQNFTPsVIFQK (V) EQGVLT(0.0)GMNET(0.0)S(0.0)AVIIAAPQNFT(0.0)PS(0.99)VIFQK K:TMT10,s:Phosphorylated S AP3B1 121888.5 3 9 445.1 310.27 HUMAN 1 0.0712 26.2313 APQPGLASPDSPHDP-p O43347;S12-p APQPGLASPDSPHDP 0.751349877647707 0.242983343850874 0.048 0.114666666666667 2.36671801509119 8.09447093171974 0.048 0.114666666666667 0.579866739057121 0.155078969632403 0.588565455170877 1.65101509125725 O43347 MSI1 O43347.S12.p_MSI1 O43347_S12s _1_1_12_12 O43347 O43347 RNA-binding protein Musashi homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15750.15750.3 17.28 17.28 1.693 3 1 1 0 867.71 2521.1537 S12s Acetyl 1 (-) METDAPQPGLAsPDSPHDPCK (M) MET(0.0)DAPQPGLAS(0.99)PDS(0.0)PHDPCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MSI1 39352 3 1 4171.1 36.24 HUMAN 1 2.3667 8.0945 APQTQHVSPMRQVEP-p E9PRY8;S549-p APQTQHVSPMRQVEP 0.463027173759312 0.237820364504368 -0.119333333333333 0.120666666666667 6.17147260228545 8.21587189453556 -0.119333333333333 0.120666666666667 0.241464194074333 0.150803982435934 -1.31505304751019 1.67204415978355 E9PRY8 NotFound E9PRY8.S549.p_NotFound E9PRY8_S549s _1_1_549_549 E9PRY8 E9PRY8|P29692-2|A0A087X1X7|P29692-4|P29692-3|E9PQZ1 Elongation factor 1-delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10724.11142.5 22.41 22.41 3.766 3 1 1 0 543.0884 2631.4441 S549s TMT10 540 (R) ATAPQTQHVsPMRQVEPPAK (K) AT(0.0)APQT(0.0)QHVS(0.99)PMRQVEPPAK K:TMT10,s:Phosphorylated S EEF1D 77196.2 62 7 369.1 339.47 HUMAN 1 -6.1715 8.2159 APRAPSASPLALHAS-p Q8N3F8;S486-p APRAPSASPLALHAS 0.665544717655066 0.123825551860941 -0.0593333333333333 0.163333333333333 3.30507503541715 11.9678627138424 -0.0593333333333334 0.163333333333333 0.46718887922606 0.063564367314691 -0.781723663130679 2.32547896692261 Q8N3F8 MICALL1 Q8N3F8.S486.p_MICALL1 Q8N3F8_S486s _1_1_486_486 Q8N3F8 Q8N3F8 MICAL-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10927.10927.3 17.6 10.36 2.24 3 1 1 0 529.6129 1506.859 S486s TMT10 482 (R) APSAsPLALHASR (L) APS(0.0)AS(0.99)PLALHAS(0.0)R s:Phosphorylated S MICALL1 94409.4 2 6 755.1 231.25 HUMAN 1 -3.3051 11.9679 APRAVFPSIVGRPRH-p P63261;S33-p APRAVFPSIVGRPRH 0.207163605124651 0.898912157702689 0.209333333333333 -0.0153333333333333 13.2175132388187 0.648497819344193 0.209333333333333 -0.0153333333333333 0.0476703868316961 0.861291612719439 2.55033652441822 -0.183207126895646 P63261 ACTG1 P63261.S33.p_ACTG1 P63261_S33s _1_1_33_33 P63261 P68133|P62736|P68032|P63267|P60709|P63261 Actin, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18392.18392.2 8.16 8.16 99 1 1 1 0 754.4225 1427.8684 S33s TMT10 29 (R) AVFPsIVGRPR (H) AVFPS(1.0)IVGRPR s:Phosphorylated S ACTG1 42134.4 1 9 1233.1 163.71 HUMAN 1 13.2175 -0.6485 APRCAPPSPPPPVEP-p Q6IQ19;S80-p APRCAPPSPPPPVEP 0.550271369306398 0.100071183612032 0.093 0.285 4.7863538727672 13.2124204326388 0.093 0.285 0.332173217149131 0.0477263208703605 1.06475684609 2.54798995321844 Q6IQ19 CCSAP Q6IQ19.S80.p_CCSAP Q6IQ19_S80s _1_1_80_80 Q6IQ19 Q6IQ19|Q6IQ19-4|Q6IQ19-3 Centriole, cilia and spindle-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11271.11271.3 14.58 14.58 6.793 2 1 1 0 875.4166 2544.2714 S80s TMT10 76 (R) CAPPsPPPPVEPATQEEAERR (A) CAPPS(0.99)PPPPVEPAT(0.0)QEEAERR C:Carbamidomethylation,s:Phosphorylated S CCSAP 30444 2 2 2959.1 64.73 HUMAN 1 4.7864 13.2124 APRDPGDSEELTRFP-p Q9H425;S88-p APRDPGDSEELTRFP 0.582247983606284 0.947334082989632 0.0856666666666667 0.00800000000000003 4.3246903883372 0.335529390485471 0.0856666666666667 0.00800000000000004 0.369428980277489 0.925650544530091 0.978707595493608 0.0977396342973312 Q9H425 C1orf198 Q9H425.S88.p_C1orf198 Q9H425_S88s _1_1_88_88 Q9H425 Q9H425|Q9H425-3 Uncharacterized protein C1orf198 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15732.15732.5 11.84 6.68 3.702 3 1 1 0 658.3459 3207.7275 S88s TMT10 79 (R) APAPRDPGDsEELTRFPGLRGPTGQK (V) APAPRDPGDS(0.99)EELT(0.0)RFPGLRGPT(0.0)GQK K:TMT10,s:Phosphorylated S C1orf198 36459.9 2 2 1196.1 167.35 HUMAN 1 4.3247 0.3355 APRERGSSLSGTDDG-p Q9Y6D5;S277-p APRERGSSLSGTDDG 0.668062231327386 0.173251703388099 -0.0766666666666667 0.223666666666667 3.27700993444216 10.0098485791681 -0.0766666666666667 0.223666666666667 0.470217736472317 0.0997734850174584 -0.776135827810683 1.98261890178607 Q9Y6D5 ARFGEF2 Q9Y6D5.S277.p_ARFGEF2 Q9Y6D5_S277s _1_1_277_277 Q9Y6D5 Q9Y6D5 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13658.13658.2 16.06 14.35 1.517 4 1 1 0 1044.5187 2008.0599 S277s TMT10 275 (R) GSsLSGTDDGAQEVVK (D) GS(0.0)S(0.99)LS(0.0)GT(0.0)DDGAQEVVK K:TMT10,s:Phosphorylated S ARFGEF2 204545.1 31 3 205.1 448.88 HUMAN 1 -3.277 10.0098 APRERHSSGILPTFQ-p I3L2J0;S693-p APRERHSSGILPTFQ 0.223277891105136 0.888139576657369 -0.209333333333333 0.02 12.5184300233603 0.723839649011142 -0.209333333333333 0.02 0.0559959990716816 0.846478701359416 -2.4246417930516 0.203076530495531 I3L2J0 NotFound I3L2J0.S693.p_NotFound I3L2J0_S693sS710s_2_2_693_710 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28920.28920.3 9.8 9.8 1.656 7 2 2 0 929.4543 2626.41 S693s S710s Hydrogen 691 (R) HSsGILPTFQTNLTFTVPIsPGRR (K) HS(0.0)S(0.99)GILPT(0.0)FQT(0.0)NLT(0.0)FT(0.0)VPIS(0.99)PGRR s:Phosphorylated S CIC 259056.7 4 45 23.1 999.57 HUMAN 1 -12.5184 0.7238 APRHGLQSLGKVAIA-p P48634;S46-p APRHGLQSLGKVAIA 0.146270525101547 0.00863320241253354 -0.244 -0.491666666666667 17.0022598921765 29.2802840009792 -0.244 -0.491666666666667 0.0199422433154602 0.00118024345271017 -3.26307992162176 -6.2065737557447 P48634 PRRC2A P48634.S46.p_PRRC2A P48634_S46s _1_1_46_46 P48634 Q9Y520-7|Q9Y520-5|E7EPN9|Q9Y520-4|Q9Y520-6|Q9Y520-3|Q5JSZ5|P48634|P48634-3|P48634-2|Q5JSZ5-5|P48634-4|A0A1W2PQP5 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11105.11105.2 12.33 12.33 99 1 1 1 0 689.3864 1297.7992 S46s TMT10 42 (R) HGLQsLGK (V) HGLQS(1.0)LGK K:TMT10,s:Phosphorylated S PRRC2A 229315.4 2 2 36.1 882.05 HUMAN 1 -17.0023 -29.2803 APRKDQESPKMPRKE-p Q92835;S1039-p APRKDQESPKMPRKE 0.871044768133441 0.0658497091461924 -0.0343333333333333 0.215666666666667 1.17319425683168 15.718873902352 -0.0343333333333333 0.215666666666667 0.763274185234404 0.0267986310599948 -0.316775402213658 3.01231303191342 Q92835 INPP5D Q92835.S1039.p_INPP5D Q92835_S1039s _1_1_1039_1039 Q92835 Q92835|Q92835-2|Q92835-3 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6374.6374.4 8.76 4.74 99 1 1 1 0 496.5237 1903.1038 S1039s TMT10 1035 (R) KDQEsPKMPR (K) KDQES(1.0)PKMPR K:TMT10,s:Phosphorylated S INPP5D 134202.9 1 1 6902.1 8.76 HUMAN 1 -1.1732 15.7189 APRLGPFSPKEVSSA-p Q8WUU4;S52-p APRLGPFSPKEVSSA 0.0415140505759818 0.00387979257248964 -0.495666666666667 -0.587333333333333 30.8407642620166 35.6320264781219 -0.495666666666667 -0.587333333333333 0.000823993097733994 0.000273399270981282 -6.69206288421845 -8.32981935682431 Q8WUU4 ZNF296 Q8WUU4.S52.p_ZNF296 Q8WUU4_S52s _1_1_52_52 Q8WUU4 Q8WUU4|Q8IX33 Zinc finger protein 296 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20793.20793.2 8.31 3.8 99 1 1 1 0 642.3633 1203.7502 S52s TMT10 48 (R) LGPFsPK (E) LGPFS(1.0)PK K:TMT10,s:Phosphorylated S ZNF296 51836.4 2 1 3351.1 53.13 HUMAN 1 -30.8408 -35.632 APRLPEFSFEKRQVV-p Q9C0E8;S321-p APRLPEFSFEKRQVV 0.417112875322982 0.0654317087754246 -0.167666666666667 -0.404 7.00972901690086 15.757201614634 -0.167666666666667 -0.404 0.199079755324343 0.026563166136929 -1.46271611801541 -3.01961439684592 Q9C0E8 KIAA1715 Q9C0E8.S321.p_KIAA1715 Q9C0E8_S321s _1_1_321_321 Q9C0E8 Q9C0E8-4|Q9C0E8-2|Q9C0E8-3 Endoplasmic reticulum junction formation protein lunapark HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27744.27744.2 10.78 5.37 99 1 1 1 0 767.902 1454.8295 S321s TMT10 317 (R) LPEFsFEK (R) LPEFS(1.0)FEK K:TMT10,s:Phosphorylated S LNPK 48081.4 1 7 1776.1 115.62 HUMAN 1 -7.0097 -15.7572 APRLRKGSDALRPPV-p Q8N3D4;S310-p APRLRKGSDALRPPV 0.0478194935682717 0.00509455060478819 -0.516333333333333 -0.547 29.2922012587828 33.376730987267 -0.516333333333333 -0.547 0.00117700924508709 0.000459543789565989 -6.21963156660339 -7.51531513808662 Q8N3D4 EHBP1L1 Q8N3D4.S310.p_EHBP1L1 Q8N3D4_S310s _1_1_310_310 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13531.13746.3 16.53 9.33 99 1 1 1 0 853.119 2477.3764 S310s Hydrogen 308 (R) KGsDALRPPVPQGEDEVPK (A) KGS(1.0)DALRPPVPQGEDEVPK K:TMT10-Lys-Only,s:Phosphorylated S EHBP1L1 162650.3 9 3 593.1 264.13 HUMAN 1 -29.2922 -33.3767 APRPSAPSPPPRSRS-p Q8IV50;S24-p APRPSAPSPPPRSRS 0.682078728827876 0.454746932176607 -0.099 -0.089 3.11502218626878 4.56263952632839 -0.099 -0.089 0.488087607807994 0.349732544284976 -0.74367932375076 -1.02307101001594 Q8IV50 LYSMD2 Q8IV50.S24.p_LYSMD2 Q8IV50_S24s _1_1_24_24 Q8IV50 Q8IV50 LysM and putative peptidoglycan-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4946.4946.4 13.93 9.12 4.25 2 1 1 0 509.5166 1955.0773 S24s TMT10 12 (R) EGGPRAPRPSAPsPPPR (S) EGGPRAPRPS(0.0)APS(0.99)PPPR s:Phosphorylated S LYSMD2 23519.8 6 2 2395.2 85.34 HUMAN 1 -3.115 -4.5626 APRPVPGSPARDAPA-p Q5TZA2;S1460-p APRPVPGSPARDAPA 0.941601783060378 0.787855385190929 -0.0193333333333333 -0.0306666666666666 0.512987420759169 1.43765758752151 -0.0193333333333333 -0.0306666666666666 0.888589665363945 0.718181545516755 -0.1468193573946 -0.380282997365659 Q5TZA2 CROCC Q5TZA2.S1460.p_CROCC Q5TZA2_S1460s _1_1_1460_1460 Q5TZA2 Q5TZA2|Q5TZA2-2 Rootletin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7114.7114.3 12.45 12.45 5.452 2 1 1 0 589.3167 1685.9649 S1460s TMT10 1449 (R) APSPAPRPVPGsPAR (D) APS(0.0)PAPRPVPGS(0.99)PAR s:Phosphorylated S CROCC 228918.7 2 7 912.1 201.7 HUMAN 1 -0.513 -1.4377 APRRRAVSMDNSNKY-p O43524;S253-p APRRRAVSMDNSNKY 0.319460793173524 0.00291264171750006 -0.277333333333333 -0.718666666666667 9.27812687600862 38.3008880115977 -0.277333333333333 -0.718666666666667 0.118082982097221 0.000147880598250034 -1.85651926990087 -9.3927752839245 O43524 FOXO3 O43524.S253.p_FOXO3 O43524_S253s _1_1_253_253 O43524 O43524|O43524-2 Forkhead box protein O3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8881.8881.2 13.69 13.69 4.495 2 1 1 0 752.3682 1423.7615 S253s TMT10 251 (R) AVsMDNSNK (Y) AVS(0.99)MDNS(0.0)NK K:TMT10,s:Phosphorylated S FOXO3 71560.7 4 4 938.1 198.15 HUMAN 1 -9.2781 -38.3009 APRSAPPSPPFPPPP-p Q8WX93;S688-p APRSAPPSPPFPPPP 0.780946211493183 0.499008829556219 -0.0663333333333333 0.106333333333333 2.06422808215381 4.03896724488972 -0.0663333333333334 0.106333333333333 0.621694738361388 0.39455111543296 -0.522979290384667 0.924413236317858 Q8WX93 PALLD Q8WX93.S688.p_PALLD Q8WX93_S688s _1_1_688_688 Q8WX93 Q8WX93|Q8WX93-3 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.34204.34401.4 24.25 21.07 2.806 6 1 1 0 962.971 3768.8967 S688s TMT10 684 (R) SAPPsPPFPPPPAFPELAACTPPASPEPMSALASR (S) S(0.0)APPS(0.99)PPFPPPPAFPELAACT(0.0)PPAS(0.0)PEPMS(0.0)ALAS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PALLD 151930.4 4 3 338.1 354.43 HUMAN 1 -2.0642 4.039 APRSTPPSPPTHRVH-p A8CG34;S165-p APRSTPPSPPTHRVH 0.805930071607606 0.568152275295938 0.0783333333333333 -0.170666666666667 1.80655420664255 3.30903629567907 0.0783333333333333 -0.170666666666667 0.659697106669828 0.466762944043628 0.46552273980607 -0.78239506292627 A8CG34 NotFound A8CG34.S165.p_NotFound A8CG34_S165s _1_1_165_165 A8CG34 A8CG34 Nuclear envelope pore membrane protein POM 121C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4680.4889.3 12.82 12.82 2 4 1 1 0 462.564 1305.7113 S165s TMT10 161 (R) STPPsPPTHR (V) S(0.0)T(0.0)PPS(0.99)PPT(0.0)HR s:Phosphorylated S POM121C 125455.9 3 6 133.2 532.02 HUMAN 1 1.8066 -3.309 APRTHPYSPKIDGTR-p Q15853-3;S155-p APRTHPYSPKIDGTR 0.187097862414736 0.90964644859606 0.372666666666667 -0.017 14.3020271055192 0.575560225339896 0.372666666666667 -0.017 0.0371361852412738 0.875878724922679 2.74854174612562 -0.163723505158293 Q15853 USF2 Q15853.3.S155.p_USF2 Q15853-3_S155s _1_1_155_155 Q15853-3 B4DLJ1|Q15853|Q15853-2|Q15853-3|Q15853-4 Isoform USF2B of Upstream stimulatory factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7066.7066.3 9.33 9.33 2.39 4 1 1 0 637.3351 1830.0274 S155s TMT10 151 (R) THPYsPKIDGTR (T) T(0.0)HPY(0.0)S(0.99)PKIDGT(0.0)R K:TMT10,s:Phosphorylated S USF2 30683.2 3 5 3527.2 49 HUMAN 1 14.302 -0.5756 APRTHPYSPKSEAPR-p P22415;S186-p APRTHPYSPKSEAPR 0.362391294262152 0.53105118318972 0.184666666666667 0.0706666666666667 8.19100527979538 3.69575741294028 0.184666666666667 0.0706666666666667 0.151669925003692 0.426996444436044 1.66827962986502 0.858370023361368 P22415 USF1 P22415.S186.p_USF1 P22415_S186s _1_1_186_186 P22415 P22415|B1AQP1|P22415-2 Upstream stimulatory factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5333.5333.3 12.93 12.93 1.874 4 1 1 0 636.6599 1828.0118 S186s TMT10 182 (R) THPYsPKSEAPR (T) T(0.0)HPY(0.0)S(0.99)PKS(0.0)EAPR K:TMT10,s:Phosphorylated S USF1 33651.6 9 2 3527.1 49 HUMAN 1 8.191 3.6958 APRTPHPSPAHSSRK-p Q6ZS17-4;S748-p APRTPHPSPAHSSRK 0.460247258167029 0.353541651009375 0.117666666666667 0.0956666666666667 6.21453755043146 5.98741555696688 0.117666666666667 0.0956666666666667 0.239081650298086 0.25191756180058 1.32269305670095 1.28201705006502 Q6ZS17 FAM65A Q6ZS17.4.S748.p_FAM65A Q6ZS17-4_S748s _1_1_748_748 Q6ZS17-4 Q6ZS17-4|A0A0A0MTL6 Isoform 4 of Rho family-interacting cell polarization regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3363.3363.3 14.03 14.03 7.982 4 1 1 0 494.9069 1402.7389 S748s TMT10 744 (R) TPHPsPAHSSR (K) T(0.0)PHPS(0.99)PAHS(0.0)S(0.0)R s:Phosphorylated S RIPOR1 135393.6 1 6 1530.1 133.82 HUMAN 1 6.2145 5.9874 APSARRNSTTFPSRH-p Q96E09;S62-p APSARRNSTTFPSRH 0.727720307510799 0.183669890211405 -0.049 0.171666666666667 2.61915339072805 9.67878166151302 -0.049 0.171666666666667 0.54712260802701 0.107676723979659 -0.641936558858884 1.92520333055066 Q96E09 FAM122A Q96E09.S62.p_FAM122A Q96E09_S62s _1_1_62_62 Q96E09 Q96E09 Protein FAM122A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4759.4759.2 7.89 7.89 1.129 4 1 1 0 687.8383 1294.7065 S62s TMT10 60 (R) RNsTTFPSR (H) RNS(0.99)T(0.0)T(0.0)FPS(0.0)R s:Phosphorylated S FAM122A 30813.8 2 3 509.1 287.77 HUMAN 1 -2.6192 9.6788 APSEGAGSDVFDGDL-p P04626;S1083-p APSEGAGSDVFDGDL 0.148266672319898 0.971700567530295 -0.244333333333333 0.00366666666666669 16.81355413254 0.176127775653751 -0.244333333333333 0.00366666666666669 0.0208278569766556 0.960256426675033 -3.22600232742744 0.0521765294693596 P04626 ERBB2 P04626.S1083.p_ERBB2 P04626_S1083s _1_1_1083_1083 P04626 P04626|P04626-4|P04626-5|B4DTR1|P04626-2|P04626-3 Receptor tyrosine-protein kinase erbB-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26713.26713.3 21.45 21.45 5.559 3 1 1 0 929.7812 2707.3649 S1083s TMT10 1073 (R) SPLAPSEGAGsDVFDGDLGMGAAK (G) S(0.0)PLAPS(0.0)EGAGS(0.99)DVFDGDLGMGAAK K:TMT10,s:Phosphorylated S ERBB2 141274.2 12 19 521.1 283.33 HUMAN 1 -16.8136 0.1761 APSGPPVSPAPSPAS-p E7ESL9;S97-p APSGPPVSPAPSPAS 0.361526160641994 0.423449001975383 0.146666666666667 0.0923333333333333 8.21262662789497 4.9680822577556 0.146666666666667 0.0923333333333334 0.150916712864534 0.318560389891756 1.67202686707751 1.09798502396949 E7ESL9 AGAP3 E7ESL9.S97.p_AGAP3 E7ESL9_S97s _1_1_97_97 E7ESL9 E7ESL9 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12881.12881.3 13.41 11.03 2.926 6 1 1 0 855.1119 2483.3568 S97s TMT10 88 (R) GLAPSGPPVsPAPSPASSPAPTRR (S) GLAPS(0.0)GPPVS(0.99)PAPS(0.0)PAS(0.0)S(0.0)PAPT(0.0)RR s:Phosphorylated S AGAP3 62355.5 1 1 1235.2 163.67 HUMAN 1 8.2126 4.9681 APSIHGGSGGRGVSV-p P08727;S40-p APSIHGGSGGRGVSV 0.242621677232425 0.0736610869230557 0.185666666666667 0.249666666666667 11.7664551478151 15.0399049981687 0.185666666666667 0.249666666666667 0.0665816395367776 0.03133354265628 2.2909774727988 2.88405063610947 P08727 KRT19 P08727.S40.p_KRT19 P08727_S40s _1_1_40_40 P08727 P08727 Keratin, type I cytoskeletal 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16702.16702.4 16.97 14.36 3.961 2 1 1 0 534.7738 2056.1038 S40s TMT10 25 (R) FGPGVAFRAPSIHGGsGGR (G) FGPGVAFRAPS(0.0)IHGGS(0.99)GGR s:Phosphorylated S KRT19 44105.2 12 7 383.1 334.07 HUMAN 1 11.7665 15.0399 APSPPQGSPQDQHHF-p Q96RY5;S75-p APSPPQGSPQDQHHF 0.32674805496941 0.81351905076457 0.146666666666667 -0.0253333333333333 9.09065392830682 1.25504320038306 0.146666666666667 -0.0253333333333333 0.123291917545881 0.749023907741286 1.82405679175193 -0.336649669662572 Q96RY5 CRAMP1 Q96RY5.S75.p_CRAMP1 Q96RY5_S70sS75s_2_2_70_75 Q96RY5 Q96RY5 Protein cramped-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15050.15050.4 12.9 12.9 99 2 2 2 0 868.6526 3311.6507 S70s S75s TMT10 54 (R) AGADGPPAPPGAPQAPsPPQGsPQDQHHFLR (S) AGADGPPAPPGAPQAPS(1.0)PPQGS(1.0)PQDQHHFLR s:Phosphorylated S CRAMP1 135914.1 2 12 647.1 254.68 HUMAN 1 9.0907 -1.255 APSRARNSGTQSDGE-p Q6P1M3;S961-p APSRARNSGTQSDGE 0.994167574639875 0.700200138347746 -0.00133333333333334 0.0386666666666667 0.0500511146397019 2.12839473425975 -0.00133333333333333 0.0386666666666667 0.988541459869943 0.61257677424555 -0.0150370709958809 0.536988049448189 Q6P1M3 LLGL2 Q6P1M3.S961.p_LLGL2 Q6P1M3_S961s _1_1_961_961 Q6P1M3 Q6P1M3|J3QRV5|Q6P1M3-2 Lethal(2) giant larvae protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8953.8953.4 14.44 11.22 1.155 3 1 1 0 707.6012 2747.4147 S961s TMT10 958 (R) ARNsGTQSDGEEKQPGLVMER (A) ARNS(0.99)GT(0.0)QS(0.0)DGEEKQPGLVMER K:TMT10,s:Phosphorylated S LLGL2 114415.8 8 10 881.1 207.2 HUMAN 1 -0.0501 2.1284 APSRGALSPSGSAKE-p Q13207;S676-p APSRGALSPSGSAKE 0.724520923271119 0.626026907213467 -0.0553333333333333 -0.0483333333333333 2.64935998092816 2.76756714414006 -0.0553333333333333 -0.0483333333333333 0.543330396104865 0.528741362212776 -0.648246918639422 -0.672703496050536 Q13207 TBX2 Q13207.S676.p_TBX2 Q13207_S676s _1_1_676_676 Q13207 Q13207 T-box transcription factor TBX2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9386.9386.2 14.19 4.82 1.387 3 1 1 0 706.8814 1332.7887 S676s TMT10 673 (R) GALsPSGSAK (E) GALS(0.99)PS(0.0)GS(0.0)AK K:TMT10,s:Phosphorylated S TBX2 75292.9 2 5 2245.1 91.76 HUMAN 1 -2.6494 -2.7676 APSRKTESPSLGKVV-p Q7Z2K8;S704-p APSRKTESPSLGKVV 0.927554876256796 0.286254122749607 -0.0146666666666667 -0.198 0.64600478946703 7.16726688418618 -0.0146666666666667 -0.198 0.861786171648708 0.191987658339201 -0.182562504512865 -1.48984028839069 Q7Z2K8 GPRIN1 Q7Z2K8.S704.p_GPRIN1 Q7Z2K8_S704s _1_1_704_704 Q7Z2K8 Q7Z2K8|Q7Z2K8-2 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6522.6522.3 7.08 7.08 1.302 3 1 1 0 495.6096 1404.8463 S704s Hydrogen 701 (R) KTEsPSLGK (V) KT(0.0)ES(0.99)PS(0.0)LGK K:TMT10-Lys-Only,s:Phosphorylated S GPRIN1 103196.3 6 17 292.1 381.4 HUMAN 1 -0.646 -7.1673 APSRLNQSPSLAPVK-p Q9H2P0;S709-p APSRLNQSPSLAPVK 0.470077219308049 0.223230487206154 -0.101333333333333 -0.173666666666667 6.05409186669285 8.57776963358662 -0.101333333333333 -0.173666666666667 0.248079463106738 0.138746819527401 -1.29419388465249 -1.73467971976893 Q9H2P0 ADNP Q9H2P0.S709.p_ADNP Q9H2P0_S709s _1_1_709_709 Q9H2P0 Q9H2P0 Activity-dependent neuroprotector homeobox protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13795.13795.3 14.22 14.22 1.723 2 1 1 0 616.6892 1768.0845 S709s TMT10 706 (R) LNQsPSLAPVKR (T) LNQS(0.99)PS(0.0)LAPVKR K:TMT10,s:Phosphorylated S ADNP 124930 11 7 276.1 391.38 HUMAN 1 -6.0541 -8.5778 APSRQDVYGPQPQVR-p O60716;Y257-p APSRQDVYGPQPQVR 0.0591308077305013 0.85968347938297 1.11366666666667 -0.0273333333333333 26.8469681773301 0.924616609029989 1.11366666666667 -0.0273333333333333 0.00206682250722458 0.808236276280356 5.52728644838776 -0.254836066589863 O60716 CTNND1 O60716.Y257.p_CTNND1 O60716_Y257y _1_1_257_257 O60716 O60716|O60716-2|O60716-4|O60716-6|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-24 Catenin delta-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8751.8784.3 12.7 10.26 11.169 2 1 1 0 669.6718 1927.0347 Y257y TMT10 250 (R) APSRQDVyGPQPQVR (V) APS(0.0)RQDVY(0.99)GPQPQVR y:Phosphorylated Y CTNND1 108738.6 1 3 51.1 43.85 HUMAN 1 26.847 -0.9246 APSSEPQSPVAQTSG-p Q96RE7;S145-p APSSEPQSPVAQTSG 0.150283451076775 0.839811441190131 0.288 -0.0253333333333333 16.5824125754099 1.06669828236976 0.288 -0.0253333333333333 0.0219663926548623 0.782222261955648 3.18083385705199 -0.290497437686775 Q96RE7 NACC1 Q96RE7.S145.p_NACC1 Q96RE7_S145s _1_1_145_145 Q96RE7 Q96RE7 Nucleus accumbens-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23888.23888.4 35.84 35.84 1.383 12 1 1 0 1200.8075 4720.2457 S145s TMT10 123 (K) VSSPSCDSQGLHAEEAPSSEPQsPVAQTSGWPACSTPLPLVSR (V) VS(0.0)S(0.0)PS(0.0)CDS(0.0)QGLHAEEAPS(0.0)S(0.0)EPQS(0.99)PVAQT(0.0)S(0.0)GWPACS(0.0)T(0.0)PLPLVS(0.0)R C:Carbamidomethylation,s:Phosphorylated S NACC1 57941.9 2 1 2142.1 95.99 HUMAN 1 16.5824 -1.0667 APSSRRFSEDSSTSK-p Q14207;S1296-p APSSRRFSEDSSTSK 0.808619784993991 0.108613725276988 -0.0513333333333333 -0.294 1.77258611796557 12.7379613335637 -0.0513333333333334 -0.294 0.664877120151517 0.053235810031825 -0.457829116389003 -2.4626357211241 Q14207 NPAT Q14207.S1296.p_NPAT Q14207_S1296s _1_1_1296_1296 Q14207 Q14207 Protein NPAT HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6447.6447.2 11.19 11.19 11.186 5 1 1 0 841.4131 1601.8535 S1296s TMT10 1294 (R) RFsEDSSTSK (V) RFS(0.99)EDS(0.0)S(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S NPAT 155599.6 3 8 1274.1 159.34 HUMAN 1 -1.7726 -12.738 APSVKGVSFDQANNL-p A0A0G2JPP5;S708-p APSVKGVSFDQANNL 0.583650682238144 0.735336330794 -0.111333333333333 0.0403333333333334 4.30314652233783 1.84140419114724 -0.111333333333333 0.0403333333333334 0.371266144281562 0.654424546757239 -0.974650689156377 0.473332797909667 A0A0G2JPP5 SCRIB A0A0G2JPP5.S708.p_SCRIB A0A0G2JPP5_S708s _1_1_708_708 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25364.25364.3 13.1 13.1 99 1 1 1 0 685.017 1973.0654 S708s TMT10 706 (K) GVsFDQANNLLIEPAR (I) GVS(1.0)FDQANNLLIEPAR s:Phosphorylated S SCRIB 178690.9 1 13 22.1 1004.81 HUMAN 1 -4.3031 1.8414 APSVSHVSPRKNPSV-p Q8WXE1;S224-p APSVSHVSPRKNPSV 0.142083819196639 0.00155017741389709 -0.317333333333333 -0.984666666666667 17.3228489806547 45.2027687561035 -0.317333333333333 -0.984666666666667 0.0185231610162729 3.01802702521992e-05 -3.32649566067231 -12.7386547806846 Q8WXE1 ATRIP Q8WXE1.S224.p_ATRIP Q8WXE1_S224s _1_1_224_224 Q8WXE1 Q8WXE1|Q8WXE1-2|Q8WXE1-3|Q8WXE1-5|A0A0U1RQW3 ATR-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11076.11076.3 18.49 18.49 2.951 3 1 1 0 510.6066 1449.8375 S224s TMT10 215 (K) LAAPSVSHVsPR (K) LAAPS(0.0)VS(0.0)HVS(0.99)PR s:Phosphorylated S ATRIP 87148.5 5 1 2662.1 74.67 HUMAN 1 -17.3228 -45.2028 APSYLARSLADVPRE-p Q9H4B6;S102-p APSYLARSLADVPRE 0.858923233775509 0.881647243312261 -0.0413333333333333 -0.0243333333333333 1.28855756046181 0.769159094470926 -0.0413333333333334 -0.0243333333333333 0.743265960785431 0.837691464982406 -0.344771981695411 -0.214907457058959 Q9H4B6 SAV1 Q9H4B6.S102.p_SAV1 Q9H4B6_S102s _1_1_102_102 Q9H4B6 Q9H4B6 Protein salvador homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12163.12163.2 8.22 1.66 99 1 1 1 0 533.7793 986.5832 S102s TMT10 102 (R) sLADVPR (E) S(1.0)LADVPR s:Phosphorylated S SAV1 44747.2 1 2 2825.1 69.19 HUMAN 1 -1.2886 -0.7692 APSYLEISSMRRILD-p P78347;S924-p APSYLEISSMRRILD 0.948131958402904 0.557111068927617 0.013 0.0813333333333333 0.459571886656026 3.42449216276258 0.013 0.0813333333333333 0.899586255440136 0.454517682602564 0.132221934881171 0.80526545466623 P78347 GTF2I P78347.S924.p_GTF2I P78347_S924s _1_1_924_924 P78347 P78347|P78347-3|P78347-4|P78347-2 General transcription factor II-I HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16567.16567.3 10.85 10.85 1.129 4 1 1 0 573.622 1638.8835 S924s TMT10 917 (K) APSYLEIsSMRR (I) APS(0.0)Y(0.0)LEIS(0.99)S(0.0)MRR s:Phosphorylated S GTF2I 112927.8 1 15 140.1 523.54 HUMAN 1 0.4596 3.4245 APTKRNSSPPPSPNK-p P20020;S1216-p APTKRNSSPPPSPNK 0.032486563457913 0.00536518424997561 0.596666666666667 0.666 34.8527077675526 32.9718563541493 0.596666666666667 0.666 0.000327136665979317 0.000504445630558457 8.0556775808682 7.37657051264456 P20020 ATP2B1 P20020.S1216.p_ATP2B1 P20020_S1216s _1_1_1216_1216 P20020 P20020|P20020-4|P20020-3|P20020-6|E7ERY9 Plasma membrane calcium-transporting ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6132.6132.2 12.46 12.46 1.372 3 1 1 0 781.9023 1482.8317 S1216s TMT10 1214 (R) NSsPPPSPNK (N) NS(0.0)S(0.99)PPPS(0.0)PNK K:TMT10,s:Phosphorylated S ATP2B1 139722.6 9 8 921.1 200.23 HUMAN 1 34.8527 32.9719 APTKRPRSSTVTEAP-p Q8TD19;S331-p APTKRPRSSTVTEAP 0.373999337876944 0.360527393271259 -0.125333333333333 0.122333333333333 7.90759844519508 5.87922545745194 -0.125333333333333 0.122333333333333 0.161897504843892 0.258272076492993 -1.61912722418286 1.2627238385423 Q8TD19 NEK9 Q8TD19.S331.p_NEK9 Q8TD19_S331s _1_1_331_331 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20109.20109.2 14.14 14.14 2.225 6 1 1 0 913.9764 1746.9799 S331s TMT10 331 (R) sSTVTEAPIAVVTSR (T) S(0.99)S(0.0)T(0.0)VT(0.0)EAPIAVVT(0.0)S(0.0)R s:Phosphorylated S NEK9 108935.2 9 5 224.1 425.83 HUMAN 1 -7.9076 5.8792 APTLHPYSPLSPKGR-p Q8WUF5;S110-p APTLHPYSPLSPKGR 0.781907951451767 0.0460250969829684 0.0386666666666667 -0.249 2.05057484994306 17.8898678292722 0.0386666666666667 -0.249 0.623652280851676 0.0162559822753528 0.519973298780162 -3.43721860496913 Q8WUF5 PPP1R13L Q8WUF5.S110.p_PPP1R13L Q8WUF5_S110sS113s_2_2_110_113 Q8WUF5 Q8WUF5 RelA-associated inhibitor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18556.18556.3 11.79 11.79 1.968 6 2 2 0 777.0488 2169.1956 S110s S113s TMT10 100 (R) SESAPTLHPYsPLsPK (G) S(0.0)ES(0.0)APT(0.0)LHPY(0.0)S(0.99)PLS(0.99)PK K:TMT10,s:Phosphorylated S PPP1R13L 89431.8 6 23 371.1 339.39 HUMAN 1 2.0506 -17.8899 APTSCDFSPGDLVWA-p P52701;S91-p APTSCDFSPGDLVWA 0.827100696431272 0.147750328961595 0.0313333333333333 0.178333333333333 1.58749386248256 10.933065088534 0.0313333333333333 0.178333333333333 0.69382606943455 0.080666551485587 0.415379591204406 2.14342741425901 P52701 MSH6 P52701.S91.p_MSH6 P52701_S91s _1_1_91_91 P52701 P52701|P52701-2|A0A087WWJ1|F8WAX8 DNA mismatch repair protein Msh6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29805.30009.3 14.84 14.84 1.738 4 1 1 0 905.45 2634.3638 S91s TMT10 79 (R) SVAPAAPTSCDFsPGDLVWAK (M) S(0.0)VAPAAPT(0.0)S(0.0)CDFS(0.99)PGDLVWAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MSH6 154608.6 2 7 875.1 209.27 HUMAN 1 1.5875 10.9331 APVHEPPSPRSPRAA-p Q92837;S249-p APVHEPPSPRSPRAA 0.072097360428574 0.193937580113578 0.398 0.140666666666667 24.6095358611559 9.36615439844466 0.398 0.140666666666667 0.00345976351006727 0.11571364127048 4.94555914151447 1.87106348980324 Q92837 FRAT1 Q92837.S249.p_FRAT1 Q92837_S249sS252s_2_2_249_252 Q92837 Q92837 Proto-oncogene FRAT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17390.17601.5 24.92 24.92 24.918 3 2 2 0 683.9772 3255.9206 S249s S252s TMT10 229 (R) AKLPQRPLLGPLSAPVHEPPsPRsPR (A) AKLPQRPLLGPLS(0.0)APVHEPPS(0.99)PRS(0.99)PR K:TMT10,s:Phosphorylated S FRAT1 29434.8 2 3 3094.1 60.86 HUMAN 1 24.6095 9.3662 APVINNGSPTILGKR-p Q13330;S576-p APVINNGSPTILGKR 0.384445956079301 0.00123467326444358 -0.13 -1.10033333333333 7.68727364261612 47.6804556965702 -0.13 -1.10033333333333 0.170322740278642 1.70590338255969e-05 -1.58085928486979 -14.1907098581588 Q13330 MTA1 Q13330.S576.p_MTA1 Q13330_S576s_1_1_576_576 Q13330 Q13330|E7ESY4|Q13330-3|F8W9Y9 Metastasis-associated protein MTA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25142.25477.2 18.72 18.72 1.636 2 1 1 0 1010.0702 1938.1788 N574n S576s TMT10 568 (K) VAPVINnGsPTILGK (R) VAPVIN(0.0)N(0.99)GS(0.99)PT(0.0)ILGK K:TMT10,n:Deamidated,s:Phosphorylated S MTA1 81469.4 28 8 1200.1 167 HUMAN 1 -7.6873 -47.6805 APVPLDDSNRPASLT-p Q9NYF8;S559-p APVPLDDSNRPASLT 0.248868319589054 0.264269958380265 -0.258333333333333 0.141 11.5256692976935 7.61352197976553 -0.258333333333333 0.141 0.0703773759956397 0.173239851196718 -2.24847282696771 1.56756409342143 Q9NYF8 BCLAF1 Q9NYF8.S559.p_BCLAF1 Q9NYF8_S559s _1_1_559_559 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|Q9NYF8-4 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19313.19313.3 12.86 12.86 2.729 3 1 1 0 784.0796 2270.2579 S559s TMT10 551 (K) MAPVPLDDsNRPASLTK (D) MAPVPLDDS(0.99)NRPAS(0.0)LT(0.0)K K:TMT10,s:Phosphorylated S BCLAF1 106234.3 3 30 10.1 1293.04 HUMAN 1 -11.5257 7.6135 APVPRSQSLQDQPTR-p Q8N4C8;S601-p APVPRSQSLQDQPTR 0.686155087682496 0.0328882590181218 0.105333333333333 0.401 3.06999854420112 20.0055046700341 0.105333333333333 0.401 0.493173969271794 0.00998733305818945 0.734594281441645 3.8765031512168 Q8N4C8 MINK1 Q8N4C8.S601.p_MINK1 Q8N4C8_S601s _1_1_601_601 Q8N4C8 Q8N4C8 Misshapen-like kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5523.5523.2 13.17 13.17 2.806 3 1 1 0 734.8535 1388.7331 S601s TMT10 599 (R) SQsLQDQPTR (N) S(0.0)QS(0.99)LQDQPT(0.0)R s:Phosphorylated S MINK1 150503.5 1 16 131.3 535.29 HUMAN 1 3.07 20.0055 APVQPQQSPAAAPGG-p Q13200;S16-p APVQPQQSPAAAPGG 0.318436709095685 0.37885489181599 0.181 -0.0943333333333333 9.30022210824676 5.60044477888359 0.181 -0.0943333333333333 0.117483746949656 0.275394664586537 1.86034610855583 -1.21277307541567 Q13200 PSMD2 Q13200.S16.p_PSMD2 Q13200_S16s _1_1_16_16 Q13200 Q13200|F8WBS8 26S proteasome non-ATPase regulatory subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10156.10156.4 22.93 19.28 8.998 3 1 1 0 865.2172 3377.8835 S16s TMT10 7 (R) DKAPVQPQQsPAAAPGGTDEKPSGK (E) DKAPVQPQQS(0.99)PAAAPGGT(0.0)DEKPS(0.0)GK K:TMT10,s:Phosphorylated S PSMD2 100939.6 27 1 539.1 277.07 HUMAN 1 9.3002 -5.6004 APVRPAQSLNDLACA-p Q6ZUM4;S156-p APVRPAQSLNDLACA 0.964030867224484 0.154395245209893 0.00933333333333333 0.194666666666667 0.306729029101773 10.6697843621362 0.00933333333333331 0.194666666666667 0.931809421104346 0.0857080400318232 0.0896245662430289 2.09744087933313 Q6ZUM4 ARHGAP27 Q6ZUM4.S156.p_ARHGAP27 Q6ZUM4_S156s _1_1_156_156 Q6ZUM4 Q6ZUM4|A0A0G2JNY3|E9PIR1|A0A0G2JRG8|Q6ZUM4-3|Q6ZUM4-4|A0A0G2JP16 Rho GTPase-activating protein 27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33479.33479.4 18.12 13.02 3.567 8 1 1 0 1311.6974 5163.7851 S156s TMT10 133 (R) SSLAPGLPACLYLRPAAPVRPAQsLNDLACAAVSPPAGLLGSSGSFK (A) S(0.0)S(0.0)LAPGLPACLY(0.0)LRPAAPVRPAQS(0.99)LNDLACAAVS(0.0)PPAGLLGS(0.0)S(0.0)GS(0.0)FK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARHGAP27 99078.8 3 4 467.1 303.27 HUMAN 1 0.3067 10.6698 APVTPPPSVGGSRQR-p J3KTA1;S423-p APVTPPPSVGGSRQR 0.343120598282226 0.872539279754295 -0.168333333333333 0.028 8.62981423201684 0.835423833454275 -0.168333333333333 0.028 0.137094040641891 0.825006968080968 -1.74428226973328 0.232048615329896 J3KTA1 NotFound J3KTA1.S423.p_NotFound J3KTA1_T419tS423s_2_2_419_423 J3KTA1 J3KTA1|Q96IG2|Q96IG2-2 F-box and leucine-rich repeat protein 20, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19962.19962.3 16.66 16.66 1.126 4 2 2 0 743.3542 2068.1177 T419t S423s TMT10 411 (K) VHAYFAPVtPPPsVGGSR (Q) VHAY(0.0)FAPVT(0.99)PPPS(0.99)VGGS(0.0)R t:Phosphorylated T,s:Phosphorylated S FBXL20 50400.3 1 4 4435.1 31.45 HUMAN 1 -8.6298 0.8354 APVVRTPSIQPSLLP-p P35658-3;S1024-p APVVRTPSIQPSLLP 0.106961249226817 0.773556024416885 0.472 -0.043 20.4363974519625 1.54264817599164 0.472 -0.043 0.00904399377616898 0.701027705869257 3.97323820469468 -0.404911344663664 P35658 NUP214 P35658.3.S1024.p_NUP214 P35658-3_S1024s _1_1_1024_1024 P35658-3 P35658-5|P35658-3|P35658-4|P35658-2|A0A0A0MSW3 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24498.24498.3 17.05 17.05 1.223 3 1 1 0 771.7649 2233.3109 S1024s TMT10 1022 (R) TPsIQPSLLPHAAPFAK (S) T(0.0)PS(0.99)IQPS(0.0)LLPHAAPFAK K:TMT10,s:Phosphorylated S NUP214 214428.5 3 19 111.1 572.27 HUMAN 1 20.4364 -1.5426 APWGSNPSPSAESTQ-p Q96N67-6;S946-p APWGSNPSPSAESTQ 0.439323348434208 0.757041734474605 0.157 0.037 6.57992783169178 1.6716212415912 0.157 0.037 0.219789639573256 0.680515271740458 1.38726228507294 0.434738793373729 Q96N67 DOCK7 Q96N67.6.S946.p_DOCK7 Q96N67-6_S946s _1_1_946_946 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15310.15310.2 18.1 18.1 1.608 5 1 1 0 1185.0256 2289.0767 S946s TMT10 938 (K) AAPWGSNPsPSAESTQAMDR (S) AAPWGS(0.0)NPS(0.99)PS(0.0)AES(0.0)T(0.0)QAMDR s:Phosphorylated S DOCK7 243551.1 4 17 345.1 352.4 HUMAN 1 6.5799 1.6716 APYGERMSPNQLCSV-p Q86TB9-4;S233-p APYGERMSPNQLCSV 0.434135403741661 0.0851220509035018 0.107 -0.206333333333333 6.67633320401949 14.1610526487253 0.107 -0.206333333333333 0.214964467674306 0.0383614253291448 1.40422940735773 -2.72088120508214 Q86TB9 PATL1 Q86TB9.4.S233.p_PATL1 Q86TB9-4_S233s _1_1_233_233 Q86TB9-4 Q86TB9-4 Isoform 4 of Protein PAT1 homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20573.20573.3 16.59 16.59 16.59 2 1 1 0 664.9914 1912.9935 S233s TMT10 232 (R) MsPNQLCSVPLQPGR (M) MS(0.99)PNQLCS(0.0)VPLQPGR C:Carbamidomethylation,s:Phosphorylated S PATL1 80249 3 5 1540.1 133.07 HUMAN 1 6.6763 -14.1611 AQAAAPASVPAQAPK-p P47914;S142-p AQAAAPASVPAQAPK 0.654350924407734 0.295320223373552 -0.0706666666666667 -0.137666666666667 3.45185168351059 6.99188441556722 -0.0706666666666667 -0.137666666666667 0.451663329480505 0.199899431236041 -0.810784783814949 -1.45918987626009 P47914 RPL29 P47914.S142.p_RPL29 P47914_S142s _1_1_142_142 P47914 P47914 60S ribosomal protein L29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11509.11509.3 15.85 15.85 99 1 1 1 0 639.3541 1836.0744 S142s TMT10 135 (K) AQAAAPAsVPAQAPK (R) AQAAAPAS(1.0)VPAQAPK K:TMT10,s:Phosphorylated S RPL29 17808.8 2 3 2966.1 64.48 HUMAN 1 -3.4519 -6.9919 AQAAEPPSPPASRAA-p Q2M3G4;S133-p AQAAEPPSPPASRAA 0.591065958633332 0.415633284328294 0.0896666666666667 0.185 4.20585767340715 5.07211537367422 0.0896666666666666 0.185 0.379676950456845 0.311020104270134 0.956280577553221 1.11702881939986 Q2M3G4 SHROOM1 Q2M3G4.S133.p_SHROOM1 Q2M3G4_S133s _1_1_133_133 Q2M3G4 Q2M3G4|Q2M3G4-2|A6NN40 Protein Shroom1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37654.37654.4 27.28 27.28 1.13 4 1 1 0 793.6542 3091.6261 S133s TMT10 110 (R) QATPLLYALAAEAEAAAQAAEPPsPPASR (A) QAT(0.0)PLLY(0.0)ALAAEAEAAAQAAEPPS(0.99)PPAS(0.0)R s:Phosphorylated S SHROOM1 91583.2 10 3 1717.1 119.73 HUMAN 1 4.2059 5.0721 AQADSGSSDDEAASE-p Q12894-2;S198-p AQADSGSSDDEAASE 0.0719549135296335 0.284404869336375 -0.977 -0.308 24.6675477290963 7.20107688654843 -0.977 -0.308 0.00341385622732081 0.190498829413166 -4.96006663316777 -1.49574158010311 Q12894 IFRD2 Q12894.2.S198.p_IFRD2 Q12894-2_S197sS198s_2_2_197_198 Q12894-2 Q12894-2|A0A0R4J2F6|F8WEI6 Isoform 2 of Interferon-related developmental regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4371.4371.3 11.54 11.54 1.177 6 2 2 0 743.9538 2069.9057 S197s S198s TMT10 189 (R) SSAQADSGssDDEAASEAR (S) S(0.0)S(0.0)AQADS(0.0)GS(0.99)S(0.99)DDEAAS(0.0)EAR s:Phosphorylated S IFRD2 66338.4 1 1 6104.1 13.95 HUMAN 2 -24.6675 -7.2011 AQALLEISGHSRHSE-p Q6P9B6;S440-p AQALLEISGHSRHSE 0.599304429327995 0.31520680144833 0.073 0.104666666666667 4.10840788409357 6.62503206597555 0.073 0.104666666666667 0.38829268731561 0.217518797353873 0.93779595549162 1.39483894895298 Q6P9B6 TLDC1 Q6P9B6.S440.p_TLDC1 Q6P9B6_S440sS443sS446s_3_3_440_446 Q6P9B6 Q6P9B6 TLD domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26690.26690.4 11.12 11.12 11.116 4 3 3 0 989.4409 3714.8408 S440s S443s S446s TMT10 425 (K) SILDADPEAQALLEIsGHsRHsEGLREVPDDE (-) S(0.0)ILDADPEAQALLEIS(0.99)GHS(0.99)RHS(0.99)EGLREVPDDE s:Phosphorylated S TLDC1 51620.3 1 4 2898.1 66.6 HUMAN 1 4.1084 6.625 AQALRDNSTMGYMAA-p P07900;S623-p AQALRDNSTMGYMAA 0.552777326044719 0.636794781757909 -0.0916666666666667 -0.063 4.75202108695035 2.66744272735035 -0.0916666666666667 -0.063 0.334809591730957 0.541072831127022 -1.05841230685997 -0.651931230936296 P07900 HSP90AA1 P07900.S623.p_HSP90AA1 P07900_S623s _1_1_623_623 P07900 P07900-2 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14378.14378.4 14.89 14.89 1.176 3 1 1 0 656.5992 2543.4041 S623s TMT10 616 (K) AQALRDNsTMGYMAAKK (H) AQALRDNS(0.99)T(0.0)MGY(0.0)MAAKK K:TMT10,s:Phosphorylated S HSP90AA1 85057.6 2 19 43.1 810.87 HUMAN 1 -4.752 -2.6674 AQAPTSDSPVAEDAS-p P55789;S59-p AQAPTSDSPVAEDAS 0.352091936362484 0.674993493434057 0.137666666666667 0.0503333333333333 8.41845482589654 2.33372775961615 0.137666666666667 0.0503333333333333 0.143931057873878 0.584288345891564 1.70768519250934 0.581430769095501 P55789 GFER P55789.S59.p_GFER P55789_S59s _1_1_59_59 P55789 P55789|H3BRW3 FAD-linked sulfhydryl oxidase ALR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9998.9998.3 17.47 17.47 1.153 7 1 1 0 894.7429 2602.243 S59s TMT10 43 (R) DAAASASTPAQAPTSDsPVAEDASR (R) DAAAS(0.0)AS(0.0)T(0.0)PAQAPT(0.0)S(0.0)DS(0.99)PVAEDAS(0.0)R s:Phosphorylated S GFER 24019.3 1 1 5650.1 17.47 HUMAN 1 8.4185 2.3337 AQASPAGTPPGRASP-p J3KQC6;T64-p AQASPAGTPPGRASP 0.192059131883792 0.276157238343084 -0.243333333333333 0.183666666666667 13.9868200291289 7.36274350298135 -0.243333333333333 0.183666666666667 0.039931718151422 0.183537854107081 -2.69049893897688 1.52392884000163 J3KQC6 NotFound J3KQC6.T64.p_NotFound J3KQC6_T64t _1_1_64_64 J3KQC6 Q9BYE2|J3KQC6|E9PRA0 Transmembrane protease serine 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6586.6586.2 12.99 12.99 1.131 3 1 1 0 837.4135 1593.8546 T64t TMT10 54 (R) ASPAQASPAGtPPGR (A) AS(0.0)PAQAS(0.0)PAGT(0.99)PPGR t:Phosphorylated T TMPRSS13 64250 1 4 1604.1 128.27 HUMAN 1 -13.9868 7.3627 AQCDQKGSPVPP___-p Q14129;S216-p AQCDQKGSPVPP___ 0.541961769867537 0.240957228886928 -0.0996666666666667 -0.198333333333333 4.90878244985718 8.14246256121351 -0.0996666666666667 -0.198333333333333 0.322939936106155 0.153374706222712 -1.08731519492359 -1.65932954323988 Q14129 DGCR6 Q14129.S216.p_DGCR6 Q14129_S216s _1_1_216_216 Q14129 Q14129 Protein DGCR6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29668.29668.4 18.02 18.02 99 1 1 1 0 764.1461 2973.6021 S216s TMT10 196 (K) AALGLGGPWQLPAAQCDQKGsPVPP (-) AALGLGGPWQLPAAQCDQKGS(1.0)PVPP C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DGCR6 25159.3 1 1 5578.1 18.02 HUMAN 1 -4.9088 -8.1425 AQCEVPASPQRPSRP-p Q9H074;S77-p AQCEVPASPQRPSRP 0.473965846540623 0.0712551574947493 -0.117 -0.220666666666667 5.97037649610522 15.2525841973557 -0.117 -0.220666666666667 0.252907873748509 0.0298360674486044 -1.27928458757122 -2.92401158298731 Q9H074 PAIP1 Q9H074.S77.p_PAIP1 Q9H074_S77s _1_1_77_77 Q9H074 Q9H074|D6R9H8 Polyadenylate-binding protein-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10593.10593.5 19.91 14.38 2.324 7 1 1 0 960.2969 4717.4997 S77s TMT10 64 (R) TTPPPGAQCEVPAsPQRPSRPGALPEQTRPLRAPPSSQDK (I) T(0.0)T(0.0)PPPGAQCEVPAS(0.99)PQRPS(0.0)RPGALPEQT(0.0)RPLRAPPS(0.0)S(0.0)QDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PAIP1 53980.1 6 2 3391.1 52.2 HUMAN 1 -5.9704 -15.2526 AQDATENSASSLAPG-p P42684-6;S581-p AQDATENSASSLAPG 0.2592179584854 0.0312577537776141 0.532 -0.301333333333333 11.1373085193665 20.3294644959341 0.532 -0.301333333333333 0.0769607246085773 0.0092694411259094 2.18018226254985 -3.94624590641782 P42684 ABL2 P42684.6.S581.p_ABL2 P42684-6_S581s _1_1_581_581 P42684-6 P42684|P42684-3|P42684-6|P42684-2|P42684-5|P42684-10|P42684-7|P42684-4 Isoform 6 of Abelson tyrosine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17817.17817.4 24.23 24.23 2.525 4 1 1 0 968.5061 3791.0179 S581s TMT10 563 (K) KQVENKENIEGAQDATENsASSLAPGFIR (G) KQVENKENIEGAQDAT(0.0)ENS(0.99)AS(0.0)S(0.0)LAPGFIR K:TMT10,s:Phosphorylated S ABL2 127186.4 1 2 615.1 261.3 HUMAN 1 11.1373 -20.3295 AQDLCRASPEPPGPE-p Q9C0C2;S672-p AQDLCRASPEPPGPE 0.610943262625514 0.990588291704976 0.07 -0.0013333333333333 3.96434410741953 0.0595425730822789 0.07 -0.00133333333333329 0.401389113415206 0.986383372409379 0.910307804096192 -0.0178678334503831 Q9C0C2 TNKS1BP1 Q9C0C2.S672.p_TNKS1BP1 Q9C0C2_S672s _1_1_672_672 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8826.9030.4 19.9 15.67 6.884 5 1 1 0 645.7958 2500.1935 S672s TMT10 663 (R) TEAQDLCRAsPEPPGPESSSR (W) T(0.0)EAQDLCRAS(0.99)PEPPGPES(0.0)S(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S TNKS1BP1 182819.3 15 20 4.1 2105.7 HUMAN 1 3.9643 -0.0595 AQDRDQIYRRRSPSP-p P62995;Y260-p AQDRDQIYRRRSPSP 0.523162183518031 0.206512188181556 0.127666666666667 0.217333333333333 5.20384046456963 9.01139793025105 0.127666666666667 0.217333333333333 0.301728235859406 0.125562573113011 1.14128512486646 1.80968407557487 P62995 TRA2B P62995.Y260.p_TRA2B P62995_Y260y _1_1_260_260 P62995 P62995|P62995-3 Transformer-2 protein homolog beta GG20160819_MSz_CCLE_T4D7_pY_Injection_02.5143.5182.3 16.53 10.14 99 1 1 1 0 515.5859 1464.7757 Y260y TMT10 252 (R) AAQDRDQIyR (R) AAQDRDQIY(1.0)R y:Phosphorylated Y TRA2B 33779.2 3 3 45.1 47.41 HUMAN 1 5.2038 9.0114 AQDSGIGSDSVKIRI-p Q7Z7G8;S1798-p AQDSGIGSDSVKIRI 0.149320676991533 0.0485765069919363 -0.299666666666667 -0.287 16.6409348879628 17.5654084774077 -0.299666666666667 -0.287 0.0216723752224729 0.0175169766983698 -3.19224455121727 -3.37216307292595 Q7Z7G8 VPS13B Q7Z7G8.S1798.p_VPS13B Q7Z7G8_S1798s _1_1_1798_1798 Q7Z7G8 Q7Z7G8|Q7Z7G8-6|Q7Z7G8-2 Vacuolar protein sorting-associated protein 13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12357.12357.3 15.34 15.34 2.568 5 1 1 0 670.3261 1928.9966 S1798s TMT10 1788 (R) YSGAQDSGIGsDSVK (I) Y(0.0)S(0.0)GAQDS(0.0)GIGS(0.99)DS(0.0)VK K:TMT10,s:Phosphorylated S VPS13B 454589.9 2 11 766.1 229.13 HUMAN 1 -16.6409 -17.5654 AQEAEAQSEDDDEDT-p Q5C9Z4;S280-p AQEAEAQSEDDDEDT 0.265496929072473 0.646451769518778 -0.388666666666667 -0.056 10.9174495257859 2.58302760370214 -0.388666666666667 -0.056 0.0809571195174386 0.551692702820539 -2.14165336396902 -0.634286771945549 Q5C9Z4 NOM1 Q5C9Z4.S280.p_NOM1 Q5C9Z4_S280sT287t_2_2_280_287 Q5C9Z4 Q5C9Z4 Nucleolar MIF4G domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8454.8454.3 19.82 19.82 99 2 2 2 0 1196.1753 3426.5759 S280s T287t TMT10 272 (K) KAQEAEAQsEDDDEDtEEEQGEEK (E) KAQEAEAQS(1.0)EDDDEDT(1.0)EEEQGEEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T NOM1 96826.2 3 5 2040.1 101.14 HUMAN 1 -10.9174 -2.583 AQEEKEETGDDSD__-p Q9H6Y2;T378-p AQEEKEETGDDSD__ 0.903965293335962 0.397223088298883 0.019 0.0893333333333334 0.862750397021081 5.33041470764086 0.019 0.0893333333333334 0.819832178270397 0.293061338772425 0.239087384852641 1.16402970723942 Q9H6Y2 WDR55 Q9H6Y2.T378.p_WDR55 Q9H6Y2_T378tS382s_2_2_378_382 Q9H6Y2 Q9H6Y2|G3V1J0|Q9H6Y2-2 WD repeat-containing protein 55 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30386.30809.4 19 19 12.28 6 2 2 0 1061.9339 4084.7766 T378t S382s TMT10 352 (K) TWSTDDFFAGLREEGEDSMAQEEKEEtGDDsD (-) T(0.0)WS(0.0)T(0.0)DDFFAGLREEGEDS(0.0)MAQEEKEET(0.99)GDDS(0.99)D K:TMT10,t:Phosphorylated T,s:Phosphorylated S WDR55 42582.8 5 4 2434.1 83.56 HUMAN 1 0.8628 5.3304 AQEEQSMTPPGKVVT-p Q96RY5;T767-p AQEEQSMTPPGKVVT 0.306820630007235 0.0144533398599366 0.159 -0.446666666666667 9.59595802372796 25.5042884136592 0.159 -0.446666666666667 0.109749916280931 0.00281560131026523 1.9115917937414 -5.16602385325464 Q96RY5 CRAMP1 Q96RY5.T767.p_CRAMP1 Q96RY5_T767t_1_1_767_767 Q96RY5 Q96RY5 Protein cramped-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19495.19495.4 18.82 15.99 1.215 6 1 1 0 845.9373 3284.7561 M766m T767t TMT10 745 (K) LALEANTISTASVRPAQEEQSmtPPGK (V) LALEANT(0.0)IS(0.0)T(0.0)AS(0.0)VRPAQEEQS(0.0)M(1.0)T(0.99)PPGK K:TMT10,m:Oxidized methionine,t:Phosphorylated T CRAMP1 135914.1 3 7 647.1 254.68 HUMAN 1 9.596 -25.5043 AQEIASLSKEDVSKE-p Q15311;S463-p AQEIASLSKEDVSKE 0.0821409724815468 0.0028998898692722 -0.532333333333333 0.73 23.1974473283681 38.329463320642 -0.532333333333333 0.73 0.00478911501515533 0.000146910781140866 -4.60125956591907 9.4047825641719 Q15311 RALBP1 Q15311.S463.p_RALBP1 Q15311_S463s _1_1_463_463 Q15311 Q15311 RalA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21502.21502.4 18.19 17.15 2.097 3 1 1 0 597.0858 2305.3582 S463s TMT10 455 (K) IAQEIASLsKEDVSK (E) IAQEIAS(0.0)LS(0.99)KEDVS(0.0)K K:TMT10,s:Phosphorylated S RALBP1 76461.4 2 6 822.1 218.43 HUMAN 1 -23.1974 38.3295 AQEIQDESAVLWLDE-p P46940;S598-p AQEIQDESAVLWLDE 0.086569904991124 0.00639800023666993 -0.497333333333333 0.486333333333333 22.7610563968854 31.5589315501216 -0.497333333333333 0.486333333333333 0.0052953462190809 0.000698404204119407 -4.49816735930088 6.90910848831607 P46940 IQGAP1 P46940.S598.p_IQGAP1 P46940_S598s _1_1_598_598 P46940 P46940|A0A0J9YXZ5 Ras GTPase-activating-like protein IQGAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33083.33083.4 22.69 22.69 22.688 3 1 1 0 1107.0607 4345.2555 S598s TMT10 591 (K) AQEIQDEsAVLWLDEIQGGIWQSNKDTQEAQK (F) AQEIQDES(0.99)AVLWLDEIQGGIWQS(0.0)NKDT(0.0)QEAQK K:TMT10,s:Phosphorylated S IQGAP1 189876.1 4 5 1386.1 147.7 HUMAN 1 -22.7611 31.5589 AQEKRIASLDAANAR-p Q5VWQ8;S1140-p AQEKRIASLDAANAR 0.735321298360423 0.0107551853040564 0.092 -0.459 2.52787031154092 27.5936604355848 0.092 -0.459 0.558744123889993 0.00174033941617462 0.622770443488055 -5.72398232178013 Q5VWQ8 DAB2IP Q5VWQ8.S1140.p_DAB2IP Q5VWQ8_S1140s _1_1_1140_1140 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13477.13477.2 9.54 4.99 99 1 1 1 0 655.8379 1230.7004 S1140s TMT10 1138 (R) IAsLDAANAR (L) IAS(1.0)LDAANAR s:Phosphorylated S DAB2IP 132592.9 2 23 281.1 388.28 HUMAN 1 2.5279 -27.5937 AQENKHDSYIPCSER-p Q14161;S668-p AQENKHDSYIPCSER 0.137301954068809 0.0400978302262368 -0.312333333333333 -0.337 17.6897381670782 18.7289927942374 -0.312333333333333 -0.337 0.0170226113336241 0.0133998741818919 -3.39974426224329 -3.60822565380237 Q14161 GIT2 Q14161.S668.p_GIT2 Q14161_S668s _1_1_668_668 Q14161 Q14161|Q14161-3|Q14161-5|Q14161-4|F8VXI9|Q14161-8|Q14161-10|F8WAK2|Q14161-6|Q14161-9|Q14161-7|Q14161-11 ARF GTPase-activating protein GIT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6925.6925.4 18.5 18.5 3.041 3 1 1 0 611.5428 2363.1814 S668s TMT10 660 (R) AAQENKHDsYIPCSER (I) AAQENKHDS(0.99)Y(0.0)IPCS(0.0)ER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GIT2 85168.8 2 13 474.1 301.74 HUMAN 1 -17.6897 -18.729 AQEPGSQTPLKSMLV-p O60271;T1264-p AQEPGSQTPLKSMLV 0.336200474871642 0.084633414096391 0.143333333333333 0.203333333333333 8.82446432555171 14.1961448931454 0.143333333333333 0.203333333333333 0.131085171756489 0.0380527029313442 1.77797731907752 2.72733867619513 O60271 SPAG9 O60271.T1264.p_SPAG9 O60271_T1264t _1_1_1264_1264 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-9 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10581.10581.2 13.99 13.99 2.159 3 1 1 0 1003.5217 1926.0697 T1264t TMT10 1253 (K) AGPSAQEPGSQtPLK (S) AGPS(0.0)AQEPGS(0.0)QT(0.99)PLK K:TMT10,t:Phosphorylated T SPAG9 147001.6 3 40 84.1 629.25 HUMAN 1 8.8245 14.1961 AQETQEPSPILDSEE-p Q16643-3;S427-p AQETQEPSPILDSEE 0.728675437748225 0.0218530636857154 0.0653333333333333 -0.423 2.61009319879413 22.6956240666752 0.0653333333333333 -0.423 0.548265199124642 0.00537573180100145 0.640040766225997 -4.4779100623335 Q16643 DBN1 Q16643.3.S427.p_DBN1 Q16643-3_S427s _1_1_427_427 Q16643-3 Q16643-3|Q16643-2|D6R9Q9 Isoform 3 of Drebrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25603.25603.4 22.98 22.98 4.769 7 1 1 0 1039.7622 4076.0549 S427s TMT10 401 (R) ALDEVTSSQPPPLPPPPPPAQETQEPsPILDSEETR (A) ALDEVT(0.0)S(0.0)S(0.0)QPPPLPPPPPPAQET(0.0)QEPS(0.99)PILDS(0.0)EET(0.0)R s:Phosphorylated S DBN1 76925.9 2 7 1729.1 119.21 HUMAN 1 2.6101 -22.6956 AQFDGSDSEDGHGIT-p Q8IYB7;S175-p AQFDGSDSEDGHGIT 0.23705829555746 0.0827326736760846 0.175666666666667 0.252666666666667 11.9799403659748 14.3371545022523 0.175666666666667 0.252666666666667 0.0633878415134919 0.0368370250805456 2.32877706983747 2.75333341344699 Q8IYB7 DIS3L2 Q8IYB7.S175.p_DIS3L2 Q8IYB7_S173sS175s_2_2_173_175 Q8IYB7 Q8IYB7|Q8IYB7-2|Q8IYB7-3|Q8IYB7-5|Q8IYB7-4 DIS3-like exonuclease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26847.26847.5 16.86 16.86 4.053 6 2 2 0 937.2515 4522.2829 S173s S175s TMT10 157 (K) SYNDSPDVIVEAQFDGsDsEDGHGITQNVLVDGVKK (L) S(0.0)Y(0.0)NDS(0.0)PDVIVEAQFDGS(0.99)DS(0.99)EDGHGIT(0.0)QNVLVDGVKK K:TMT10,s:Phosphorylated S DIS3L2 100304.4 2 6 1919.1 107.1 HUMAN 1 11.9799 14.3372 AQGATEKSPEDKVQI-p P49321-3;S453-p AQGATEKSPEDKVQI 0.266142547410633 0.00143774220577793 -0.605666666666667 0.936 10.8955554298901 45.8288496584605 -0.605666666666667 0.936 0.08136627927892 2.61285334470397e-05 -2.13782138397822 13.0916441027841 P49321 NASP P49321.3.S453.p_NASP P49321-3_S453s _1_1_453_453 P49321-3 P49321-3|P49321-4 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7823.8029.3 15.04 8.21 2.448 2 1 1 0 709.7151 2047.1638 S453s TMT10 445 (K) VAQGATEKsPEDK (V) VAQGAT(0.0)EKS(0.99)PEDK K:TMT10,s:Phosphorylated S NASP 86552 7 17 87.1 626.46 HUMAN 1 -10.8956 45.8288 AQGEELDSLDGGDEI-p Q9P2D1;S2983-p AQGEELDSLDGGDEI 0.885820345057877 0.51445914843296 0.0266666666666667 0.092 1.03685033673207 3.87352117288198 0.0266666666666667 0.092 0.787616791271211 0.409871652486603 0.28309657370577 0.892726823487077 Q9P2D1 CHD7 Q9P2D1.S2983.p_CHD7 Q9P2D1_S2983s _1_1_2983_2983 Q9P2D1 Q9P2D1|Q9P2D1-3|Q9P2D1-4 Chromodomain-helicase-DNA-binding protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.30636.30844.4 18.17 18.17 18.172 4 1 1 0 972.9135 3808.673 S2983s TMT10 2965 (K) TAESSLLEDEIAQGEELDsLDGGDEIENNENDE (-) T(0.0)AES(0.0)S(0.0)LLEDEIAQGEELDS(0.99)LDGGDEIENNENDE s:Phosphorylated S CHD7 337747 2 15 256.1 399.25 HUMAN 1 1.0369 3.8735 AQGGQTQSPTKSHTP-p P40123;S301-p AQGGQTQSPTKSHTP 0.12869352151856 0.686159031854962 0.664666666666667 -0.0716666666666666 18.4481593965527 2.2389457566296 0.664666666666667 -0.0716666666666667 0.0142949967298739 0.59718023360035 3.55353877273714 -0.561023228221243 P40123 CAP2 P40123.S301.p_CAP2 P40123_S301sS309s_2_2_301_309 P40123 P40123|E9PDI2|P40123-2|A0A087WZ15|A0A087X0J3|B7Z385 Adenylyl cyclase-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7288.7288.4 10.39 10.39 1.156 8 2 2 0 743.1241 2809.5411 S301s S309s TMT10 294 (R) AQGGQTQsPTKSHTPsPTSPK (S) AQGGQT(0.0)QS(0.99)PT(0.0)KS(0.0)HT(0.0)PS(0.99)PT(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S CAP2 53108.3 7 6 1885.1 109.06 HUMAN 1 18.4482 -2.2389 AQGLRPESPPPAGPL-p Q96TA1;S665-p AQGLRPESPPPAGPL 0.761476943047114 0.216370899350747 -0.0443333333333333 0.127666666666667 2.26847014963906 8.7454214514282 -0.0443333333333333 0.127666666666667 0.593134225877185 0.133492803815174 -0.567468702173492 1.76368013458137 Q96TA1 FAM129B Q96TA1.S665.p_FAM129B Q96TA1_S665s _1_1_665_665 Q96TA1 Q96TA1|Q96TA1-2 Niban-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24414.24835.4 24.19 22.68 11.573 2 1 1 0 889.4864 3474.9473 S665s TMT10 655 (R) GLLAQGLRPEsPPPAGPLLNGAPAGESPQPK (A) GLLAQGLRPES(0.99)PPPAGPLLNGAPAGES(0.0)PQPK K:TMT10,s:Phosphorylated S FAM129B 84649.8 25 7 1146.1 172.91 HUMAN 1 -2.2685 8.7454 AQGPLLPSPARGLKF-p Q9HCH0;S447-p AQGPLLPSPARGLKF 0.847701864429328 0.36682464202497 0.0343333333333333 -0.100333333333333 1.38848247421272 5.7755381962427 0.0343333333333333 -0.100333333333333 0.726359720053625 0.264512487925701 0.368673802760656 -1.24418676312025 Q9HCH0 NCKAP5L Q9HCH0.S447.p_NCKAP5L Q9HCH0_S447s _1_1_447_447 Q9HCH0 Q9HCH0|Q9HCH0-3|Q9HCH0-2 Nck-associated protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21844.21844.4 20.1 20.1 10.056 3 1 1 0 709.6452 2755.5871 S447s TMT10 428 (K) SKLQIGPPSPGEAQGPLLPsPAR (G) S(0.0)KLQIGPPS(0.0)PGEAQGPLLPS(0.99)PAR K:TMT10,s:Phosphorylated S NCKAP5L 140323.1 3 4 609.1 261.98 HUMAN 1 1.3885 -5.7755 AQGPSGSSEWEDEQS-p O76061;S288-p AQGPSGSSEWEDEQS 0.63822938487464 0.870508354156803 -0.0686666666666667 0.024 3.63812062035896 0.848986347354166 -0.0686666666666667 0.024 0.432701038938187 0.822434585545288 -0.847291489042283 0.235534381916913 O76061 STC2 O76061.S288.p_STC2 O76061_S287sS288s_2_2_287_288 O76061 O76061 Stanniocalcin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22670.22670.3 23.29 23.29 1.199 6 2 2 0 1043.7657 2969.3598 S287s S288s TMT10 276 (R) VGGLGAQGPSGssEWEDEQSEYSDIR (R) VGGLGAQGPS(0.0)GS(0.99)S(0.99)EWEDEQS(0.0)EY(0.0)S(0.0)DIR s:Phosphorylated S STC2 34103.8 7 3 2226.1 92.72 HUMAN 1 -3.6381 0.849 AQGQADESSENEEEE-p Q9Y4A0;S460-p AQGQADESSENEEEE 0.490461337009155 0.369731857493161 -0.123333333333333 0.164666666666667 5.70121869210844 5.73129518709542 -0.123333333333333 0.164666666666667 0.269077962692694 0.267220936256598 -1.2311497897503 1.2362625171185 Q9Y4A0 JRKL Q9Y4A0.S460.p_JRKL Q9Y4A0_S460sS461s_2_2_460_461 Q9Y4A0 Q9Y4A0 Jerky protein homolog-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21937.21937.4 10.54 4.96 99 2 2 2 0 812.8748 3088.5323 S460s S461s TMT10 452 (R) RAQGQADEssENEEEEIELIPEK (H) RAQGQADES(1.0)S(1.0)ENEEEEIELIPEK K:TMT10,s:Phosphorylated S JRKL 60309.9 1 2 5012.1 23.92 HUMAN 1 -5.7012 5.7313 AQHLRQSSFEIPDDV-p P46937-9;S164-p AQHLRQSSFEIPDDV 0.774092565349424 0.396163109653377 0.041 0.0846666666666667 2.12875470373968 5.34643104245435 0.041 0.0846666666666667 0.612526002289255 0.29198254908491 0.537130590065597 1.16693155565114 P46937 YAP1 P46937.9.S164.p_YAP1 P46937-9_S164s _1_1_164_164 P46937-9 P46937|P46937-8|P46937-2|P46937-7|P46937-6|P46937-3|P46937-5|P46937-9 Isoform 9 of Transcriptional coactivator YAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33586.33779.2 17.35 17.35 1.226 2 1 1 0 1378.1748 2675.3791 S164s TMT10 162 (R) QSsFEIPDDVPLPAGWEMAK (T) QS(0.0)S(0.99)FEIPDDVPLPAGWEMAK K:TMT10,s:Phosphorylated S YAP1 54998.2 47 8 436.1 313.01 HUMAN 1 2.1288 5.3464 AQIANNRTPGRWTQR-p Q8N3Z6;T226-p AQIANNRTPGRWTQR 0.672048315140611 0.0110046346773908 -0.089 -0.519333333333333 3.23375009087595 27.436638458045 -0.089 -0.519333333333333 0.474924955727072 0.00180441385945815 -0.767502541604201 -5.68056523508628 Q8N3Z6 ZCCHC7 Q8N3Z6.T226.p_ZCCHC7 Q8N3Z6_T226t _1_1_226_226 Q8N3Z6 Q8N3Z6 Zinc finger CCHC domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12968.12968.4 11.81 7.66 2.336 2 1 1 0 609.5602 2355.2479 T226t TMT10 216 (K) DIEAQIANNRtPGRWTQR (Y) DIEAQIANNRT(0.99)PGRWT(0.0)QR t:Phosphorylated T ZCCHC7 64249.5 1 1 4958.1 24.69 HUMAN 1 -3.2338 -27.4366 AQIPRDPSQQELPRL-p P49327;S1174-p AQIPRDPSQQELPRL 0.543328167061294 0.990324797150279 0.0883333333333333 -0.00166666666666667 4.89134135549902 0.0627748215744354 0.0883333333333333 -0.00166666666666667 0.324239457764288 0.985649527019091 1.08410770975874 -0.0188309218497914 P49327 FASN P49327.S1174.p_FASN P49327_S1174s _1_1_1174_1174 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22975.22975.4 17.09 17.09 99 1 1 1 0 678.8498 2632.4078 S1174s TMT10 1159 (K) MVVPGLDGAQIPRDPsQQELPR (L) MVVPGLDGAQIPRDPS(1.0)QQELPR s:Phosphorylated S FASN 276046.1 1 12 175.1 481.87 HUMAN 1 4.8913 -0.0628 AQKEMSPSPPAAQDP-p J3KQR7;S989-p AQKEMSPSPPAAQDP 0.446047532766967 0.0802529084845163 0.131333333333333 0.228666666666667 6.46618082427237 14.5380123733328 0.131333333333333 0.228666666666667 0.225622245685555 0.035172137530016 1.36720778605536 2.7904931719043 J3KQR7 NotFound J3KQR7.S989.p_NotFound J3KQR7_S987sS989s_2_2_987_989 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18080.18080.2 15.52 15.52 4.578 4 2 2 0 1214.5456 2268.1492 S987s S989s TMT10 985 (K) EMsPsPPAAQDPGGTALVSAR (E) EMS(0.99)PS(0.99)PPAAQDPGGT(0.0)ALVS(0.0)AR s:Phosphorylated S CEP170B 172326.6 4 39 51.1 746.11 HUMAN 1 6.4662 14.538 AQKKLSCSLEDLRSE-p Q8ND30;S387-p AQKKLSCSLEDLRSE 0.93931869762336 0.902583370453156 0.012 0.0146666666666667 0.531086536553313 0.620125652845001 0.012 0.0146666666666667 0.884894195511366 0.866936792628026 0.15173302694896 0.175657767539478 Q8ND30 PPFIBP2 Q8ND30.S387.p_PPFIBP2 Q8ND30_S387s _1_1_387_387 Q8ND30 Q8ND30|Q8ND30-2|Q8ND30-3|E9PP16 Liprin-beta-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16448.16448.4 12.25 7.74 2.391 4 1 1 0 659.102 2553.4161 S387s TMT10 383 (K) KLSCsLEDLRSESVDK (C) KLS(0.0)CS(0.99)LEDLRS(0.0)ES(0.0)VDK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PPFIBP2 99112.4 9 3 1287.1 158.1 HUMAN 1 0.5311 0.6201 AQKLPDLSPVENKEH-p Q9Y520-7;S2107-p AQKLPDLSPVENKEH 0.0668477670009952 0.00702532883671678 -0.382333333333333 -0.517666666666667 25.3309365686135 30.8474494710936 -0.382333333333334 -0.517666666666667 0.0029302612577909 0.000822725679242625 -5.12808410174855 -6.68317419781839 Q9Y520 PRRC2C Q9Y520.7.S2107.p_PRRC2C Q9Y520-7_S2107s _1_1_2107_2107 Q9Y520-7 Q9Y520-7|Q9Y520-5|E7EPN9|Q9Y520-4|Q9Y520-6|Q9Y520-3|Q9Y520-2 Isoform 7 of Protein PRRC2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19334.19334.3 15.91 13.78 99 1 1 1 0 736.0877 2126.2788 S2107s TMT10 2100 (K) AQKLPDLsPVENK (E) AQKLPDLS(1.0)PVENK K:TMT10,s:Phosphorylated S PRRC2C 317703.2 7 110 36.3 882.05 HUMAN 1 -25.3309 -30.8474 AQKLQLDSPEDAEFI-p O43242;S430-p AQKLQLDSPEDAEFI 0.29821012666005 0.817460550044206 -0.173333333333333 -0.0256666666666666 9.88184743483404 1.22464024342168 -0.173333333333333 -0.0256666666666666 0.102757908574895 0.754285876048946 -1.96119044568898 -0.329281648743164 O43242 PSMD3 O43242.S430.p_PSMD3 O43242_S430s _1_1_430_430 O43242 O43242|O43242-2 26S proteasome non-ATPase regulatory subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29034.29034.3 18.18 15.63 99 1 1 1 0 738.3891 2133.1844 S430s TMT10 426 (K) LQLDsPEDAEFIVAK (A) LQLDS(1.0)PEDAEFIVAK K:TMT10,s:Phosphorylated S PSMD3 61090.6 1 3 3336.1 53.52 HUMAN 1 -9.8818 -1.2246 AQKVDEDSAEDTQSN-p Q9H2G2;S565-p AQKVDEDSAEDTQSN 0.539775709796967 0.0820472852051049 -0.105 0.215666666666667 4.94700764474795 14.39431574789 -0.105 0.215666666666667 0.320109995673534 0.036355357967126 -1.094337958746 2.76389259191654 Q9H2G2 SLK Q9H2G2.S565.p_SLK Q9H2G2_S565s _1_1_565_565 Q9H2G2 Q9H2G2|Q9H2G2-2 STE20-like serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23193.23193.5 19.91 18.07 1.116 7 1 1 0 911.0275 4471.1509 S565s TMT10 540 (K) DVISNTSDVIGTCEAADVAQKVDEDsAEDTQSNDGK (E) DVIS(0.0)NT(0.0)S(0.0)DVIGT(0.0)CEAADVAQKVDEDS(0.99)AEDT(0.0)QS(0.0)NDGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLK 143320 5 10 329.1 359.67 HUMAN 1 -4.947 14.3943 AQLEPVASPAKKPKV-p Q15149;S1435-p AQLEPVASPAKKPKV 0.444636977587231 0.00157953236888053 0.218333333333333 -1.19233333333333 6.48592811380961 45.0213610445646 0.218333333333333 -1.19233333333333 0.224598674362806 3.14676198923163e-05 1.3706922304008 -12.6380682503204 Q15149 PLEC Q15149.S1435.p_PLEC Q15149_S1435s _1_1_1435_1435 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14035.14035.2 15.21 8.55 99 1 1 1 0 824.9577 1568.9412 S1435s TMT10 1428 (K) AQLEPVAsPAK (K) AQLEPVAS(1.0)PAK K:TMT10,s:Phosphorylated S PLEC 533778 13 13 44.1 794.85 HUMAN 1 6.4859 -45.0214 AQLGLGHSYSRAKVK-p O00567;S151-p AQLGLGHSYSRAKVK 0.322370497428223 0.0191485533380821 -0.247333333333333 -0.437 9.2053681248649 23.6180497363946 -0.247333333333333 -0.437 0.120077928598634 0.00434705391232417 -1.84391905550632 -4.69662859484844 O00567 NOP56 O00567.S151.p_NOP56 O00567_S151s _1_1_151_151 O00567 O00567 Nucleolar protein 56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9618.9618.3 14.7 11.85 2.319 3 1 1 0 499.9183 1417.7749 S151s TMT10 144 (K) AQLGLGHsYSR (A) AQLGLGHS(0.99)Y(0.0)S(0.0)R s:Phosphorylated S NOP56 66448.1 2 2 262.1 396.77 HUMAN 1 -9.2054 -23.618 AQLGTQRSQEADVQD-p Q9C0C2;S836-p AQLGTQRSQEADVQD 0.278130997062813 0.575650599324016 -0.160333333333333 0.067 10.5146213848775 3.23353049682339 -0.160333333333333 0.067 0.0888255410476485 0.474948970154316 -2.07127711391478 0.767346044679387 Q9C0C2 TNKS1BP1 Q9C0C2.S836.p_TNKS1BP1 Q9C0C2_S836s _1_1_836_836 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19437.19437.4 21.5 21.5 1.122 2 1 1 0 821.4235 3202.7009 S836s TMT10 824 (R) VVGKPAQLGTQRsQEADVQDWEFR (K) VVGKPAQLGT(0.0)QRS(0.99)QEADVQDWEFR K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 15 29 4.1 2105.7 HUMAN 1 -10.5146 3.2335 AQLHKRNSIEVAGLS-p Q16825;S637-p AQLHKRNSIEVAGLS 0.651183474642633 0.617752353051399 0.0863333333333333 0.0516666666666667 3.49527832310954 2.84440940434558 0.0863333333333333 0.0516666666666667 0.447169493448111 0.519468311030695 0.819332324492293 0.688535149960868 Q16825 PTPN21 Q16825.S637.p_PTPN21 Q16825_S637s _1_1_637_637 Q16825 Q16825 Tyrosine-protein phosphatase non-receptor type 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16994.16994.3 20.99 20.99 13.196 2 1 1 0 706.3743 2037.1403 S637s TMT10 635 (K) RNsIEVAGLSHGLEGLR (L) RNS(0.99)IEVAGLS(0.0)HGLEGLR s:Phosphorylated S PTPN21 134191.5 3 6 762.1 229.75 HUMAN 1 3.4953 2.8444 AQLLHALSLDEGGPE-p O15049;S176-p AQLLHALSLDEGGPE 0.665544717655066 0.22442607887089 0.06 -0.131 3.30521247223839 8.54585654619497 0.06 -0.131 0.467174094801853 0.139770122364762 0.781751002116682 -1.72915862400838 O15049 N4BP3 O15049.S176.p_N4BP3 O15049_S176s _1_1_176_176 O15049 O15049 NEDD4-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25931.25931.3 26.24 26.24 7.182 7 1 1 0 1136.1996 3326.6338 S176s TMT10 169 (R) AQLLHALsLDEGGPEPEPSLSDSSSGGSFGR (S) AQLLHALS(0.99)LDEGGPEPEPS(0.0)LS(0.0)DS(0.0)S(0.0)S(0.0)GGS(0.0)FGR s:Phosphorylated S N4BP3 60925.2 2 3 3606.1 47.21 HUMAN 1 3.3052 -8.5459 AQLQRGISPPHRIRG-p P29590-8;S720-p AQLQRGISPPHRIRG 0.662515509657473 0.046925496828619 -0.0716666666666667 0.236 3.34999703845848 17.7741150087835 -0.0716666666666667 0.236 0.462381336706297 0.0166950797947424 -0.790646697115939 3.41394316993674 P29590 PML P29590.8.S720.p_PML P29590-8_S720s _1_1_720_720 P29590-8 P29590-8|P29590-3|P29590-13 Isoform PML-2 of Protein PML HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5756.5961.3 9.36 9.36 99 1 1 1 0 358.188 992.5839 S720s TMT10 718 (R) GIsPPHR (I) GIS(1.0)PPHR s:Phosphorylated S PML 92374.1 3 13 777.1 226.8 HUMAN 1 -3.35 17.7741 AQLRRRASVRGSSEE-p Q8NC56;S134-p AQLRRRASVRGSSEE 0.828102470990375 0.409365094352572 0.046 0.105333333333333 1.57370735033967 5.16233085649894 0.046 0.105333333333333 0.696032093359061 0.30462596246695 0.412180756808199 1.13348911317791 Q8NC56 LEMD2 Q8NC56.S134.p_LEMD2 Q8NC56_S134sS138sS139s_3_3_134_139 Q8NC56 Q8NC56 LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6861.6861.4 12.19 12.19 12.194 5 3 3 0 785.578 2899.3889 S134s S138s S139s Hydrogen 133 (R) AsVRGssEEDEDARTPDRATQGPGLAAR (R) AS(0.99)VRGS(0.99)S(0.99)EEDEDART(0.0)PDRAT(0.0)QGPGLAAR s:Phosphorylated S LEMD2 57373.5 9 14 664.1 250.64 HUMAN 1 1.5737 5.1623 AQMRRAASSDQLRDN-p A0A1B0GTW1;S1037-p AQMRRAASSDQLRDN 0.993688519760512 0.988274620784613 0.00133333333333333 -0.00166666666666665 0.0565083715475068 0.0780554611922562 0.00133333333333332 -0.00166666666666665 0.987072750654251 0.982187615754186 0.0169646684206719 -0.0233745823290806 A0A1B0GTW1 NotFound A0A1B0GTW1.S1037.p_NotFound A0A1B0GTW1_S1037s _1_1_1037_1037 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12244.12458.5 17.19 17.19 1.178 3 1 1 0 655.3539 3192.7733 S1037s TMT10 1034 (R) RAAsSDQLRDNSPPPAFKPEPPK (A) RAAS(0.99)S(0.0)DQLRDNS(0.0)PPPAFKPEPPK K:TMT10,s:Phosphorylated S TJP2 141123.7 19 26 41.1 827.72 HUMAN 1 0.0565 -0.0781 AQMVLSRSQEGRGTR-p A0A0G2JPP5;S1523-p AQMVLSRSQEGRGTR 0.681920528763249 0.240654187120376 -0.0646666666666667 -0.225666666666667 3.11812964134401 8.15076832024168 -0.0646666666666667 -0.225666666666667 0.487738497264373 0.153081661747678 -0.744305309078289 -1.66076831474251 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1523.p_SCRIB A0A0G2JPP5_S1523s _1_1_1523_1523 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8113.8113.3 7.85 7.85 7.848 2 1 1 0 557.6135 1590.8583 S1523s TMT10 1516 (R) AQMVLSRsQEGR (G) AQMVLS(0.0)RS(0.99)QEGR s:Phosphorylated S SCRIB 178690.9 3 38 22.1 1004.81 HUMAN 1 -3.1181 -8.1508 AQNQGELSPPFRRDL-p Q5T011;S1209-p AQNQGELSPPFRRDL 0.910511273219812 0.955280243142548 -0.0213333333333333 0.00800000000000003 0.798722522960819 0.283743182924269 -0.0213333333333333 0.00800000000000004 0.832008470368969 0.936754270638306 -0.222599013765731 0.0830993535675881 Q5T011 SZT2 Q5T011.S1209.p_SZT2 Q5T011_S1209s _1_1_1209_1209 Q5T011 Q5T011|Q5T011-5 KICSTOR complex protein SZT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21892.21892.5 16.69 16.69 1.187 5 1 1 0 646.5361 3148.6701 S1209s TMT10 1188 (K) SHVPVLSVTLASDNAQNQGELsPPFRR (D) S(0.0)HVPVLS(0.0)VT(0.0)LAS(0.0)DNAQNQGELS(0.99)PPFRR s:Phosphorylated S SZT2 382015.9 2 4 964.1 193.97 HUMAN 1 -0.7987 0.2837 AQPDGAESEWTDVET-p Q02241;S924-p AQPDGAESEWTDVET 0.134145303088202 0.57884555931716 0.327666666666667 0.083 17.9624143063324 3.20412480418685 0.327666666666667 0.0829999999999999 0.015986690581084 0.478175719024746 3.45466267539026 0.761464862954416 Q02241 KIF23 Q02241.S924.p_KIF23 Q02241_S924s _1_1_924_924 Q02241 Q02241|H7BYN4|Q02241-2|Q02241-3 Kinesin-like protein KIF23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17559.17559.3 17.75 17.75 2.329 6 1 1 0 881.4041 2562.2157 S924s TMT10 911 (R) SSTVAPAQPDGAEsEWTDVETR (C) S(0.0)S(0.0)T(0.0)VAPAQPDGAES(0.99)EWT(0.0)DVET(0.0)R s:Phosphorylated S KIF23 111083.9 3 15 352.1 350.35 HUMAN 1 17.9624 3.2041 AQPKEVMSPTGSARG-p O43347;S191-p AQPKEVMSPTGSARG 0.563005808318766 0.0306422082460381 0.0773333333333333 -0.358333333333333 4.59607747641331 20.4567245578295 0.0773333333333334 -0.358333333333333 0.347050162715488 0.00900176237083452 1.02948817946708 -3.97383385969269 O43347 MSI1 O43347.S191.p_MSI1 O43347_S191s _1_1_191_191 O43347 O43347 RNA-binding protein Musashi homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7952.7952.3 10.67 8.58 1.519 3 1 1 0 448.5454 1263.6565 S191s TMT10 188 (K) EVMsPTGSAR (G) EVMS(0.99)PT(0.0)GS(0.0)AR s:Phosphorylated S MSI1 39352 3 3 4171.1 36.24 HUMAN 1 4.5961 -20.4567 AQPPPGVSPSRLRIG-p P46108;S83-p AQPPPGVSPSRLRIG 0.553842218497382 0.0977373280802448 -0.102 -0.205 4.73738982259947 13.3540693167976 -0.102 -0.205 0.335939458421939 0.0461947975689961 -1.05570599765196 -2.57361010404657 P46108 CRK P46108.S83.p_CRK P46108_S83s_1_1_83_83 P46108 P46108|I3L297|P46108-2 Adapter molecule crk HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17520.17520.5 12.57 11.98 1.15 7 1 1 0 731.5933 3572.9651 N63n S83s TMT10 57 (R) VSHYIInSSGPRPPVPPSPAQPPPGVsPSRLR (I) VS(0.0)HY(0.0)IIN(1.0)S(0.0)S(0.0)GPRPPVPPS(0.0)PAQPPPGVS(0.99)PS(0.0)RLR n:Deamidated,s:Phosphorylated S CRK 33887.1 1 2 1891.1 108.77 HUMAN 1 -4.7374 -13.3541 AQPPRRKSVEEESKK-p X6RAB3;S458-p AQPPRRKSVEEESKK 0.472747504381845 0.00949153116870816 0.180666666666667 0.609666666666667 5.99607572511306 28.5390570596928 0.180666666666667 0.609666666666667 0.251415719204793 0.00139989123400482 1.28386447091358 5.9907605428633 X6RAB3 NotFound X6RAB3.S458.p_NotFound X6RAB3_S458s _1_1_458_458 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4494.4494.3 9.81 9.81 9.812 2 1 1 0 620.3477 1779.0579 S458s TMT10 456 (R) RKsVEEESK (K) RKS(0.99)VEEES(0.0)K K:TMT10,s:Phosphorylated S USP6NL 96835.5 3 5 364.1 342.41 HUMAN 1 5.9961 28.5391 AQPPRTQTPPLGQTP-p P78344;T508-p AQPPRTQTPPLGQTP 0.815148778365125 0.396470931672566 0.0363333333333333 -0.0836666666666667 1.70416339556519 5.34207705715321 0.0363333333333333 -0.0836666666666667 0.675435154110549 0.292275420685332 0.442242336692819 -1.166142837284 P78344 EIF4G2 P78344.T508.p_EIF4G2 P78344_T508t _1_1_508_508 P78344 P78344|P78344-2|H0Y3P2 Eukaryotic translation initiation factor 4 gamma 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22137.22137.3 16.9 15.19 1.108 3 1 1 0 706.3971 2037.2108 T508t TMT10 506 (R) TQtPPLGQTPQLGLK (T) T(0.0)QT(0.99)PPLGQT(0.0)PQLGLK K:TMT10,t:Phosphorylated T EIF4G2 102873.5 26 6 1107.1 176.26 HUMAN 1 1.7042 -5.3421 AQPRVPLTPTRGTSS-p Q68CZ2;T632-p AQPRVPLTPTRGTSS 0.602377813619717 0.0411454540796318 -0.094 -0.463666666666667 4.06518753357781 18.5739298366086 -0.094 -0.463666666666667 0.392176211326787 0.0138869546209086 -0.929569917501264 -3.57631712837838 Q68CZ2 TNS3 Q68CZ2.T632.p_TNS3 Q68CZ2_T632t _1_1_632_632 Q68CZ2 Q68CZ2|Q68CZ2-2 Tensin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9245.9245.2 10.51 4.56 2.211 5 1 1 0 790.9212 1500.8696 T632t TMT10 629 (R) VPLtPTRGTSSR (V) VPLT(0.99)PT(0.0)RGT(0.0)S(0.0)S(0.0)R t:Phosphorylated T TNS3 156460.9 4 5 183.1 477.16 HUMAN 1 -4.0652 -18.5739 AQPSMTASPQTEEFF-p A0A0A0MRC4;S577-p AQPSMTASPQTEEFF 0.792798769070852 0.361822928209438 -0.039 -0.0936666666666666 1.94503640612245 5.85642183250464 -0.039 -0.0936666666666667 0.638993380759663 0.259631759633831 -0.496595258582552 -1.25865105161735 A0A0A0MRC4 NotFound A0A0A0MRC4.S577.p_NotFound A0A0A0MRC4_S577s _1_1_577_577 A0A0A0MRC4 A0A0A0MRC4|Q86YR5|A0A0A0MSK4|Q86YR5-4|Q86YR5-2 G-protein-signaling modulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.34768.34768.3 18.46 18.46 1.193 7 1 1 0 1017.4851 2970.4716 S577s TMT10 569 (R) IAQPSMTAsPQTEEFFDLIASSQSR (R) IAQPS(0.0)MT(0.0)AS(0.99)PQT(0.0)EEFFDLIAS(0.0)S(0.0)QS(0.0)R s:Phosphorylated S GPSM1 78910.1 2 5 1684.1 121.22 HUMAN 1 -1.945 -5.8564 AQQMAPPSPSNSTPN-p Q15434;S35-p AQQMAPPSPSNSTPN 0.778036304173139 0.56838700915617 -0.0413333333333333 -0.0743333333333333 2.09371044347117 3.30678408601657 -0.0413333333333333 -0.0743333333333333 0.617488616407052 0.467005065619471 -0.529456309717879 -0.781947249086932 Q15434 RBMS2 Q15434.S35.p_RBMS2 Q15434_S35s_1_1_35_35 Q15434 Q15434|F8W1T6|F8VQS9 RNA-binding motif, single-stranded-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18106.18106.5 15.26 15.26 1.208 11 1 1 0 966.6911 4748.472 S35s N48n TMT10 19 (R) NNKKPYVSLAQQMAPPsPSNSTPNSSSGSnGNDQLSK (T) N(0.0)N(0.0)KKPY(0.0)VS(0.0)LAQQMAPPS(0.99)PS(0.0)N(0.0)S(0.0)T(0.0)PN(0.0)S(0.0)S(0.0)S(0.0)GS(0.0)N(0.99)GN(0.0)DQLS(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated RBMS2 44186.1 16 1 2184.1 94.14 HUMAN 1 -2.0937 -3.3068 AQQPGLQSPAKAPGP-p Q9Y6V0-5;S429-p AQQPGLQSPAKAPGP 0.706604154820368 0.00987532593183393 -0.0723333333333333 -0.653333333333333 2.83389446253996 28.2161742886307 -0.0723333333333334 -0.653333333333333 0.520727548027387 0.00150793482499108 -0.686467623223273 -5.89859740193744 Q9Y6V0 PCLO Q9Y6V0.5.S429.p_PCLO Q9Y6V0-5_S429s _1_1_429_429 Q9Y6V0-5 Q9Y6V0-5|Q9Y6V0-6|Q9Y6V0-2 Isoform 5 of Protein piccolo HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15871.15871.3 9.06 9.06 99 1 1 1 0 625.0181 1793.0685 S429s TMT10 420 (K) PLAQQPGLQsPAK (A) PLAQQPGLQS(1.0)PAK K:TMT10,s:Phosphorylated S PCLO 562515 1 1 1007.1 189 HUMAN 1 -2.8339 -28.2162 AQQPKKPSPQPSSPR-p O75909;S324-p AQQPKKPSPQPSSPR 0.601861285397072 0.0152972852356639 -0.103666666666667 0.349 4.0730674391803 25.1118625008675 -0.103666666666667 0.349 0.391465285953796 0.0030818659880082 -0.931070982334447 5.06580434477686 O75909 CCNK O75909.S324.p_CCNK O75909_S324s _1_1_324_324 O75909 O75909-4|G3V5E1|O75909-1 Cyclin-K HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7645.7645.4 20.47 20.47 2.691 3 1 1 0 912.2328 3565.9442 S324s TMT10 306 (K) DPQQPAQQQQPAQQPKKPsPQPSSPR (Q) DPQQPAQQQQPAQQPKKPS(0.99)PQPS(0.0)S(0.0)PR K:TMT10,s:Phosphorylated S CCNK 64637.9 9 2 1127.1 174.7 HUMAN 1 -4.0731 25.1119 AQQSRRGSWREEEDR-p Q86UK7-2;S333-p AQQSRRGSWREEEDR 0.16541735067902 0.4025652934234 -0.365333333333333 -0.183333333333333 15.6391353720885 5.25651561959245 -0.365333333333333 -0.183333333333333 0.0272952114344324 0.298090707658867 -2.99920315581132 -1.15062219382229 Q86UK7 ZNF598 Q86UK7.2.S333.p_ZNF598 Q86UK7-2_S333s _1_1_333_333 Q86UK7-2 Q86UK7-2 Isoform 2 of E3 ubiquitin-protein ligase ZNF598 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8809.8809.4 11.92 6.37 99 1 1 1 0 582.0382 2245.1635 S333s TMT10 331 (R) RGsWREEEDREVAAAVR (A) RGS(1.0)WREEEDREVAAAVR s:Phosphorylated S ZNF598 99572.9 1 5 2531.1 79.67 HUMAN 1 -15.6391 -5.2565 AQQVEGASPGRGAQG-p Q96NY7;S112-p AQQVEGASPGRGAQG 0.405906564884755 0.0212166027155992 -0.119 0.314 7.2292363719284 22.8876392349574 -0.119 0.314 0.189267638220026 0.00514323154598049 -1.50108317643198 4.52288194272257 Q96NY7 CLIC6 Q96NY7.S112.p_CLIC6 Q96NY7_S112s _1_1_112_112 Q96NY7 Q96NY7|Q96NY7-2 Chloride intracellular channel protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9221.9221.3 33.52 29.92 2.265 4 1 1 0 1324.5861 3891.7703 S112s TMT10 78 (R) GAHGETEAEEGAPEGAEVPQGGEETSGAQQVEGAsPGR (G) GAHGET(0.0)EAEEGAPEGAEVPQGGEET(0.0)S(0.0)GAQQVEGAS(0.99)PGR s:Phosphorylated S CLIC6 73238.4 6 1 1280.1 158.88 HUMAN 1 -7.2292 22.8876 AQREGAKYVSHGATG-p P00966;Y113-p AQREGAKYVSHGATG 0.563706289752441 0.00963400225198682 0.151666666666667 0.508333333333333 4.58654457324934 28.4259673133953 0.151666666666667 0.508333333333334 0.347812785637866 0.00143682299105341 1.02771421280496 5.95835470598144 P00966 ASS1 P00966.Y113.p_ASS1 P00966_Y113y _1_1_113_113 P00966 P00966 Argininosuccinate synthase GG20160819_MSz_CCLE_T4D7_pY_Injection_01.6005.6005.3 13.2 13.2 2.75 3 1 1 0 486.5908 1377.7891 Y113y TMT10 113 (K) yVSHGATGK (G) Y(0.99)VS(0.0)HGAT(0.0)GK K:TMT10,y:Phosphorylated Y ASS1 46814.8 2 1 267.1 13.2 HUMAN 1 4.5865 28.426 AQRGEESSEEEEKGY-p Q9BW71;S160-p AQRGEESSEEEEKGY 0.111075288137026 0.146270680828253 0.355 0.175333333333333 19.9513812172518 10.9963523762245 0.355 0.175333333333333 0.0101125778569326 0.0794995668407748 3.8685240153048 2.15449936650435 Q9BW71 HIRIP3 Q9BW71.S160.p_HIRIP3 Q9BW71_S159sS160s_2_2_159_160 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11738.11738.4 9.22 9.22 9.218 3 2 2 0 757.8589 2868.483 S159s S160s TMT10 150 (R) DLPAQRGEEssEEEEKGYK (G) DLPAQRGEES(0.99)S(0.99)EEEEKGY(0.0)K K:TMT10,s:Phosphorylated S HIRIP3 62298.3 5 21 178.1 481.23 HUMAN 1 19.9514 10.9964 AQRQRAHSVDVEKNR-p Q6IQ19;S240-p AQRQRAHSVDVEKNR 0.698770973809784 0.0109664692788809 -0.0616666666666667 0.559333333333333 2.92564728552737 27.4583451548938 -0.0616666666666667 0.559333333333333 0.509841603589384 0.00179541762633141 -0.705269537095637 5.68655234181748 Q6IQ19 CCSAP Q6IQ19.S240.p_CCSAP Q6IQ19_S240s _1_1_240_240 Q6IQ19 Q6IQ19|Q6IQ19-2 Centriole, cilia and spindle-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5343.5343.2 12.65 12.65 99 1 1 1 0 597.2925 1113.6102 S240s Hydrogen 238 (R) AHsVDVEK (N) AHS(1.0)VDVEK K:TMT10-Lys-Only,s:Phosphorylated S CCSAP 30444 2 5 2959.1 64.73 HUMAN 1 -2.9256 27.4583 AQSDGEESPAAEEQL-p D6REX3;S532-p AQSDGEESPAAEEQL 0.127985709318208 0.0124265846059279 -0.367666666666667 0.621 18.4989118562144 26.5922296399524 -0.367666666666667 0.621 0.0141289150641314 0.0021916794523252 -3.56394861282358 5.45130012007918 D6REX3 NotFound D6REX3.S532.p_NotFound D6REX3_S527sS532s_2_2_527_532 D6REX3 D6REX3|O94979-8|O94979-2|O94979-9|O94979-3|D6RHZ5 Protein transport protein Sec31A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21013.21013.5 26.48 26.48 10.127 3 2 2 0 803.9769 3855.9339 S527s S532s TMT10 520 (K) DSDQVAQsDGEEsPAAEEQLLGEHIKEEK (E) DS(0.0)DQVAQS(0.99)DGEES(0.99)PAAEEQLLGEHIKEEK K:TMT10,s:Phosphorylated S SEC31A 137193.7 4 9 665.1 250.42 HUMAN 1 -18.4989 26.5922 AQSEEERSDEEPEAK-p Q9BTK6;S148-p AQSEEERSDEEPEAK 0.476702687437192 0.76915098289621 -0.338 0.201 5.92390486513221 1.57524492679524 -0.338 0.201 0.255628642351993 0.695785713729864 -1.27099599385558 0.412493368484905 Q9BTK6 PAGR1 Q9BTK6.S148.p_PAGR1 Q9BTK6_T138tS143sS148s_3_3_138_148 Q9BTK6 Q9BTK6 PAXIP1-associated glutamate-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8712.8712.4 7.9 3.87 99 3 3 3 0 778.0873 2869.4216 T138t S143s S148s TMT10 135 (R) RPPtPEAQsEEERsDEEPEAK (E) RPPT(1.0)PEAQS(1.0)EEERS(1.0)DEEPEAK K:TMT10,t:Phosphorylated T,s:Phosphorylated S PAGR1 27829.6 2 3 2728.1 72.58 HUMAN 1 -5.9239 1.5752 AQSGSDSSPEPKAPA-p Q9UQ35;S1621-p AQSGSDSSPEPKAPA 0.863245250945555 0.0316359987498557 0.031 0.871666666666667 1.24559167349896 20.257749483921 0.031 0.871666666666667 0.750655779417872 0.00942377810646993 0.334396531177295 3.93074700598052 Q9UQ35 SRRM2 Q9UQ35.S1621.p_SRRM2 Q9UQ35_S1620sS1621s_2_2_1620_1621 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7729.7729.4 14.7 14.7 2.17 4 2 2 0 575.7735 2140.1399 S1620s S1621s TMT10 1614 (R) AQSGSDssPEPKAPAPR (A) AQS(0.0)GS(0.0)DS(0.99)S(0.99)PEPKAPAPR K:TMT10,s:Phosphorylated S SRRM2 300351.7 9 220 2.1 3310.34 HUMAN 1 1.2456 20.2577 AQSHQAATPPKDGKN-p A0A0C4DFY5;T468-p AQSHQAATPPKDGKN 0.407878856431238 0.0438410121432512 -0.131666666666667 -0.300666666666667 7.19202215253068 18.1937414388684 -0.131666666666667 -0.300666666666667 0.190896420383747 0.015157439941947 -1.49458558651242 -3.49867823301017 A0A0C4DFY5 GPRC5C A0A0C4DFY5.T468.p_GPRC5C A0A0C4DFY5_T468t _1_1_468_468 A0A0C4DFY5 A0A0C4DFY5|Q9NQ84-2|J9JIE0 G-protein-coupled receptor family C group 5 member C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14019.14019.5 23.99 19.96 5.759 9 1 1 0 898.4431 4408.2229 T468t TMT10 439 (R) ATANSQVMGSANSTLRAEDMYSAQSHQAAtPPKDGK (N) AT(0.0)ANS(0.0)QVMGS(0.0)ANS(0.0)T(0.0)LRAEDMY(0.0)S(0.0)AQS(0.0)HQAAT(0.99)PPKDGK K:TMT10,t:Phosphorylated T GPRC5C 53504 10 8 1470.1 139.57 HUMAN 1 -7.192 -18.1937 AQSKKTKSIAEELEL-p Q9UBT7;S374-p AQSKKTKSIAEELEL 0.148724295141356 0.0404299745526599 -0.431666666666667 0.385 16.7026727469224 18.6812846321793 -0.431666666666667 0.385 0.0213664674384173 0.0135478861000465 -3.2043008372366 3.59839319202337 Q9UBT7 CTNNAL1 Q9UBT7.S374.p_CTNNAL1 Q9UBT7_S374s _1_1_374_374 Q9UBT7 Q9UBT7|Q9UBT7-2|Q9UBT7-3 Alpha-catulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.35882.35882.3 17.81 11.24 13.301 2 1 1 0 628.3564 1803.0879 S374s TMT10 374 (K) sIAEELELSILK (I) S(0.99)IAEELELS(0.0)ILK K:TMT10,s:Phosphorylated S CTNNAL1 82636.6 6 2 2440.1 83.32 HUMAN 1 -16.7027 18.6813 AQSLKAPSIATIKSL-p Q6R327-3;S1307-p AQSLKAPSIATIKSL 0.300478673172259 0.00372619220137502 -0.383 0.874 9.81278076343794 36.0291440075865 -0.383 0.874 0.104405150477889 0.000249508645886737 -1.94920168840646 8.48090482312723 Q6R327 RICTOR Q6R327.3.S1307.p_RICTOR Q6R327-3_S1307s _1_1_1307_1307 Q6R327-3 Q6R327-3 Isoform 3 of Rapamycin-insensitive companion of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17609.17609.2 9.18 3.47 2.293 2 1 1 0 669.8925 1258.8135 S1307s TMT10 1305 (K) APsIATIK (S) APS(0.99)IAT(0.0)IK K:TMT10,s:Phosphorylated S RICTOR 197118.3 1 15 452.1 308.36 HUMAN 1 -9.8128 36.0291 AQSLMPCSPKTTAVE-p Q15468-2;S753-p AQSLMPCSPKTTAVE 0.208993010347482 0.00687243543846817 -0.355 -0.478 13.1235483978748 31.0238761556393 -0.355 -0.478 0.0487130318218206 0.000789973248063894 -2.53335370250971 -6.73862679927363 Q15468 STIL Q15468.2.S753.p_STIL Q15468-2_S753s _1_1_753_753 Q15468-2 Q15468-2|E9PSF2 Isoform 2 of SCL-interrupting locus protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25662.25662.3 17.45 17.45 7.049 2 1 1 0 671.3498 1932.0699 S753s TMT10 743 (R) LLEAQSLMPCsPK (T) LLEAQS(0.0)LMPCS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S STIL 145036 1 2 2451.1 82.93 HUMAN 1 -13.1235 -31.0239 AQSQRSPSELFAQHI-p Q9Y2W1;S624-p AQSQRSPSELFAQHI 0.642910629713767 0.0426249663470396 -0.0926666666666667 0.281666666666667 3.58617512797115 18.358301509899 -0.0926666666666667 0.281666666666667 0.437907604690657 0.014593849021478 -0.837151150004469 3.53218048896687 Q9Y2W1 THRAP3 Q9Y2W1.S624.p_THRAP3 Q9Y2W1_S624s _1_1_624_624 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25031.25031.4 22.01 22.01 1.228 3 1 1 0 645.8583 2500.444 S624s TMT10 622 (R) SPsELFAQHIVTIVHHVK (E) S(0.0)PS(0.99)ELFAQHIVT(0.0)IVHHVK K:TMT10,s:Phosphorylated S THRAP3 108720.9 2 79 10.2 1293.04 HUMAN 1 -3.5862 18.3583 AQSRLHVSAPDLRLC-p B7Z1M9;S128-p AQSRLHVSAPDLRLC 0.998411472282392 0.199268297541263 -0.000333333333333343 0.146666666666667 0.00997761705944374 9.2176037061751 -0.00033333333333333 0.146666666666667 0.997705205844775 0.119740103549806 -0.00301133507195849 1.84535638618336 B7Z1M9 C2CD4D B7Z1M9.S128.p_C2CD4D B7Z1M9_S128s _1_1_128_128 B7Z1M9 B7Z1M9 C2 calcium-dependent domain-containing protein 4D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15001.15001.3 14.13 7.98 99 1 1 1 0 439.5691 1236.7262 S128s TMT10 125 (R) LHVsAPDLR (L) LHVS(1.0)APDLR s:Phosphorylated S C2CD4D 38096 2 3 3907.1 40.97 HUMAN 1 -0.01 9.2176 AQSSKADSLLAVVKR-p Q15424;S288-p AQSSKADSLLAVVKR 0.477468266229797 0.390349881488321 -0.197333333333333 0.247666666666667 5.90790139859745 5.43275741492359 -0.197333333333333 0.247666666666667 0.25657235480786 0.286236002822598 -1.26813957613438 1.18254833721649 Q15424 SAFB Q15424.S288.p_SAFB Q15424_S288s _1_1_288_288 Q15424 Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25677.25677.2 13.64 6.98 99 1 1 1 0 727.4252 1373.8768 S288s TMT10 286 (K) ADsLLAVVK (R) ADS(1.0)LLAVVK K:TMT10,s:Phosphorylated S SAFB 103096.3 3 24 83.1 629.62 HUMAN 1 -5.9079 5.4328 AQTNDSDSDTESKRQ-p O14647;S1087-p AQTNDSDSDTESKRQ 0.0715981735064038 0.0126876261348301 0.712333333333333 0.537 24.7396405582776 26.4427716337623 0.712333333333333 0.537 0.00335765402553749 0.00226841670385527 4.97813653412319 5.41144693255003 O14647 CHD2 O14647.S1087.p_CHD2 O14647_S1085sS1087s_2_2_1085_1087 O14647 O14647|O14647-2 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6126.6126.3 10.09 10.09 2.498 5 2 2 0 791.6956 2213.15 S1085s S1087s TMT10 1079 (K) KAQTNDsDsDTESK (R) KAQT(0.0)NDS(0.99)DS(0.99)DT(0.0)ES(0.0)K K:TMT10,s:Phosphorylated S CHD2 212309.6 4 15 482.1 298.11 HUMAN 1 24.7396 26.4428 AQTRVRGSGLGARGS-p A0A0A0MR66;S962-p AQTRVRGSGLGARGS 0.228808163463225 0.10016820010431 0.373666666666667 0.188333333333333 12.3089248269054 13.2046834758187 0.373666666666667 0.188333333333333 0.0587634813954321 0.0478114210983857 2.38725214603781 2.54659244021105 A0A0A0MR66 RBM10 A0A0A0MR66.S962.p_RBM10 A0A0A0MR66_S962s _1_1_962_962 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2|P98175-3|P98175-4 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4768.4768.3 8.44 3.3 99 1 1 1 0 394.5501 1101.669 S962s TMT10 959 (R) VRGsGLGAR (G) VRGS(1.0)GLGAR s:Phosphorylated S RBM10 110706.4 1 16 270.1 394.36 HUMAN 1 12.3089 13.2047 AQTSRRPSQGPPARS-p Q9C0C2;S1545-p AQTSRRPSQGPPARS 0.832555551949107 0.720357318838227 0.0316666666666667 0.0353333333333333 1.53651517264076 1.96299104540885 0.0316666666666667 0.0353333333333334 0.702018379855888 0.636357102125725 0.403524603239454 0.5005327331565 Q9C0C2 TNKS1BP1 Q9C0C2.S1545.p_TNKS1BP1 Q9C0C2_S1545s_1_1_1545_1545 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24276.24325.4 15.12 15.12 1.103 7 1 1 0 931.4402 3626.7747 S1545s M1570m TMT10 1543 (R) RPsQGPPARSPSQDFSFIEDTEILDSAmYR (S) RPS(0.99)QGPPARS(0.0)PS(0.0)QDFS(0.0)FIEDT(0.0)EILDS(0.0)AM(1.0)Y(0.0)R s:Phosphorylated S,m:Oxidized methionine TNKS1BP1 182819.3 31 63 4.1 2105.7 HUMAN 1 1.5365 1.963 AQTVGVVSPESLVST-p Q9NQW6;S621-p AQTVGVVSPESLVST 0.326502819643871 0.022053582526035 -0.208333333333333 -0.457666666666667 9.10152807837003 22.6332390081954 -0.208333333333333 -0.457666666666667 0.122983597314109 0.00545350981604311 -1.82593944033907 -4.4633607014707 Q9NQW6 ANLN Q9NQW6.S621.p_ANLN Q9NQW6_S621s _1_1_621_621 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37729.37729.4 33.84 30.71 4.115 11 1 1 0 1346.3973 5302.6032 S621s TMT10 583 (K) SQEEMDQALAESSEEQEDALNISSMSLLAPLAQTVGVVsPESLVSTPR (L) S(0.0)QEEMDQALAES(0.0)S(0.0)EEQEDALNIS(0.0)S(0.0)MS(0.0)LLAPLAQT(0.0)VGVVS(0.99)PES(0.0)LVS(0.0)T(0.0)PR s:Phosphorylated S ANLN 125566 4 41 68.1 675.08 HUMAN 1 -9.1015 -22.6332 AQVPGPLTPEMEARQ-p Q9H8Y5;T607-p AQVPGPLTPEMEARQ 0.559422364195579 0.997626865821263 0.0793333333333333 0.000333333333333352 4.65555529385081 0.0142966888847664 0.0793333333333333 0.00033333333333335 0.342329614175274 0.996713478204298 1.04054098281712 0.00431234081946012 Q9H8Y5 ANKZF1 Q9H8Y5.T607.p_ANKZF1 Q9H8Y5_T607t _1_1_607_607 Q9H8Y5 Q9H8Y5|B8ZZS4 Ankyrin repeat and zinc finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17238.17238.3 18.42 18.42 99 1 1 1 0 602.3012 1724.9203 T607t TMT10 600 (K) AQVPGPLtPEMEAR (Q) AQVPGPLT(1.0)PEMEAR t:Phosphorylated T ANKZF1 81610 3 3 1990.1 103.88 HUMAN 1 4.6556 0.0143 AQVSRRISFSASHRL-p Q03393;S19-p AQVSRRISFSASHRL 0.177101494022294 0.0171552060422052 -0.228666666666667 -0.335 14.9059809272273 24.3583387064292 -0.228666666666667 -0.335 0.0323148323605093 0.0036657777372029 -2.86083634652882 -4.877193287499 Q03393 PTS Q03393.S19.p_PTS Q03393_S19s _1_1_19_19 Q03393 Q03393|E9PJM0|E9PKY8 6-pyruvoyl tetrahydrobiopterin synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7270.7270.3 8.98 8.98 1.177 3 1 1 0 457.2361 1289.7276 S19s TMT10 17 (R) RIsFSASHR (L) RIS(0.99)FS(0.0)AS(0.0)HR s:Phosphorylated S PTS 16499.5 3 1 6867.1 8.98 HUMAN 1 -14.906 -24.3583 AQWLRGVSPQSCSED-p F8W130;S376-p AQWLRGVSPQSCSED 0.507195047903141 0.294373376099156 0.139333333333333 -0.115 5.43771779943099 7.01251143801881 0.139333333333333 -0.115 0.285909259068902 0.198952250524379 1.18370180072222 -1.46279823479576 F8W130 TROAP F8W130.S376.p_TROAP F8W130_S376s _1_1_376_376 F8W130 F8W130 Tastin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25762.25762.3 19.58 16.85 1.117 3 1 1 0 874.413 2541.2605 S376s TMT10 374 (R) GVsPQSCSEDPALPWEQVAVR (L) GVS(0.99)PQS(0.0)CS(0.0)EDPALPWEQVAVR C:Carbamidomethylation,s:Phosphorylated S TROAP 95330.1 1 4 1545.1 132.83 HUMAN 1 5.4377 -7.0125 AQYNRHDSPEDVKRR-p P31948-2;S528-p AQYNRHDSPEDVKRR 0.992509897153069 0.478170412362545 0.00166666666666667 0.081 0.0696747772404555 4.2738803903668 0.00166666666666666 0.081 0.984084796494812 0.373776472404415 0.0208864280959068 0.96896079000241 P31948 STIP1 P31948.2.S528.p_STIP1 P31948-2_S528s_1_1_528_528 P31948-2 P31948-2|P31948-3 Isoform 2 of Stress-induced-phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10648.10648.4 19.67 19.67 9.234 2 1 1 0 630.7833 2439.1619 N524n S528s TMT10 518 (R) CMMAQYnRHDsPEDVK (R) CMMAQY(0.0)N(1.0)RHDS(0.99)PEDVK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S STIP1 68763.9 36 4 1370.1 149.31 HUMAN 1 0.0697 4.2739 AQYSSQKSVEERSLR-p Q99959;S135-p AQYSSQKSVEERSLR 0.201147832961288 0.0243936061397655 0.277666666666667 0.296 13.5321325255467 21.9650791554156 0.277666666666667 0.296 0.0443390871294787 0.00636051211929922 2.60741104845991 4.30940063611852 Q99959 PKP2 Q99959.S135.p_PKP2 Q99959_S132sS135s_2_2_132_135 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7275.7275.2 9.64 9.64 1.185 5 2 2 0 1094.5086 2028.0762 S132s S135s TMT10 126 (R) GTAQYSsQKsVEER (S) GT(0.0)AQY(0.0)S(0.0)S(0.99)QKS(0.99)VEER K:TMT10,s:Phosphorylated S PKP2 97926.6 1 22 257.1 399.17 HUMAN 1 13.5321 21.9651 ARADRFSSCIDMGKE-p O15020;S1965-p ARADRFSSCIDMGKE 0.890771178410925 0.806568783597285 0.024 0.0296666666666667 0.982528012126864 1.30626610325644 0.024 0.0296666666666667 0.797530312678526 0.740241432630194 0.269490002811327 0.348994896353373 O15020 SPTBN2 O15020.S1965.p_SPTBN2 O15020_S1965s _1_1_1965_1965 O15020 O15020|O15020-2 Spectrin beta chain, non-erythrocytic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19522.19522.2 8.29 8.29 1.113 2 1 1 0 791.8727 1502.7747 S1965s TMT10 1963 (R) FSsCIDMGK (E) FS(0.0)S(0.99)CIDMGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SPTBN2 272689.3 1 10 781.1 225.92 HUMAN 1 0.9825 1.3063 ARAERTASEINFDKL-p Q9Y4K4;S335-p ARAERTASEINFDKL 0.771638354290043 0.0115228750179318 0.0546666666666667 -0.550333333333333 2.15922784469501 27.1247110471674 0.0546666666666667 -0.550333333333333 0.608243134454137 0.00193878162626402 0.543782408131864 -5.5950523935284 Q9Y4K4 MAP4K5 Q9Y4K4.S335.p_MAP4K5 Q9Y4K4_S335s _1_1_335_335 Q9Y4K4 Q9Y4K4|A0A0A0MQR1 Mitogen-activated protein kinase kinase kinase kinase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23924.23924.4 15.55 15.55 1.664 2 1 1 0 668.6125 2591.4597 S335s Hydrogen 333 (R) TAsEINFDKLQFEPPLRK (E) T(0.0)AS(0.99)EINFDKLQFEPPLRK K:TMT10-Lys-Only,s:Phosphorylated S MAP4K5 96122.2 6 1 2450.1 82.98 HUMAN 1 2.1592 -27.1247 ARAGKSMSAEDLLER-p Q8TF72;S1221-p ARAGKSMSAEDLLER 0.963727711891825 0.823970313198659 0.00899999999999999 -0.022 0.308985452435932 1.17806531294431 0.009 -0.022 0.931325415320229 0.762418575207415 0.090262748764891 -0.317934434434978 Q8TF72 SHROOM3 Q8TF72.S1221.p_SHROOM3 Q8TF72_S1221s _1_1_1221_1221 Q8TF72 Q8TF72 Protein Shroom3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18650.18650.2 15.38 15.38 2.482 2 1 1 0 730.3377 1379.7038 S1221s TMT10 1219 (K) SMsAEDLLER (S) S(0.0)MS(0.99)AEDLLER s:Phosphorylated S SHROOM3 218451.1 5 46 90.2 622.62 HUMAN 1 0.309 -1.1781 ARAGSRLSAEERQRE-p Q86Y82;S142-p ARAGSRLSAEERQRE 0.706604154820368 0.901272848642271 -0.117333333333333 -0.0333333333333333 2.83385713407814 0.629854445161417 -0.117333333333333 -0.0333333333333333 0.520732023801945 0.864996908869018 -0.686459947335803 -0.178250640058679 Q86Y82 STX12 Q86Y82.S142.p_STX12 Q86Y82_S142s _1_1_142_142 Q86Y82 Q86Y82 Syntaxin-12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4576.4576.3 10.67 6.15 2.41 2 1 1 0 462.231 1304.712 S142s TMT10 137 (R) AGSRLsAEER (Q) AGS(0.0)RLS(0.99)AEER s:Phosphorylated S STX12 31755.5 1 3 4912.1 25.15 HUMAN 1 -2.8339 -0.6299 ARAKAPPSLPHSASL-p Q9UJF2-2;S1028-p ARAKAPPSLPHSASL 0.81814161291288 0.133185399890878 -0.0396666666666667 -0.161666666666667 1.67757381447194 11.5408557035516 -0.0396666666666667 -0.161666666666667 0.679583175639436 0.0701317102176239 -0.436152309920019 -2.25007721092765 Q9UJF2 RASAL2 Q9UJF2.2.S1028.p_RASAL2 Q9UJF2-2_S1028s _1_1_1028_1028 Q9UJF2-2 Q9UJF2-2 Isoform 2 of Ras GTPase-activating protein nGAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12619.12619.3 10.26 10.26 10.262 3 1 1 0 514.6074 1461.8375 S1028s TMT10 1025 (K) APPsLPHSASLR (S) APPS(0.99)LPHS(0.0)AS(0.0)LR s:Phosphorylated S RASAL2 145265.6 1 41 281.2 388.28 HUMAN 1 -1.6776 -11.5409 ARAKRKYSEVDDSLP-p Q05D32;S28-p ARAKRKYSEVDDSLP 0.0495990523839634 0.0310908781831712 -1.22066666666667 -0.394333333333333 28.8763593969808 20.3641639281142 -1.22066666666667 -0.394333333333333 0.00129528119456363 0.00919567486153389 -6.09740569586205 -3.95375741194491 Q05D32 CTDSPL2 Q05D32.S28.p_CTDSPL2 Q05D32_S28s _1_1_28_28 Q05D32 Q05D32|Q05D32-2 CTD small phosphatase-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14319.14319.4 7.61 7.61 2.255 5 1 1 0 730.6436 2839.5859 S28s TMT10 26 (R) KYsEVDDSLPSGGEKPSK (N) KY(0.0)S(0.99)EVDDS(0.0)LPS(0.0)GGEKPS(0.0)K K:TMT10,s:Phosphorylated S CTDSPL2 53168.9 3 2 899.1 203.79 HUMAN 1 -28.8764 -20.3642 ARALTQPSPVSTPSS-p P04920;S144-p ARALTQPSPVSTPSS 0.206615709644391 0.183313099831904 -0.219 -0.139 13.243961650797 9.69217232963887 -0.219 -0.139 0.0473809577168042 0.107345233997866 -2.55512185557672 -1.92752377264123 P04920 SLC4A2 P04920.S144.p_SLC4A2 P04920_S144s _1_1_144_144 P04920 P04920|P04920-3|P04920-2 Anion exchange protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28756.28767.3 21.01 21.01 1.648 7 1 1 0 1044.4968 3051.5108 S144s TMT10 139 (R) ALTQPsPVSTPSSVQFFLQEDDSADR (K) ALT(0.0)QPS(0.99)PVS(0.0)T(0.0)PS(0.0)S(0.0)VQFFLQEDDS(0.0)ADR s:Phosphorylated S SLC4A2 137577.4 8 3 1448.1 140.9 HUMAN 1 -13.244 -9.6922 ARANITLSGKKRRKL-p A0A0B4J220;S65-p ARANITLSGKKRRKL 0.124772131083953 0.00230842523947764 0.277666666666667 -0.952333333333333 18.8035185528835 40.6265505162363 0.277666666666667 -0.952333333333334 0.0131718915013311 8.65655212343402e-05 3.62674715254993 -10.4168003059316 A0A0B4J220 C11orf98 A0A0B4J220.S65.p_C11orf98 A0A0B4J220_S65s _1_1_65_65 A0A0B4J220 A0A0B4J220|E9PRG8|E9PLD3 Chromosome 11 open reading frame 48, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15448.15448.2 12.06 12.06 2.193 2 1 1 0 671.3802 1261.788 S65s TMT10 60 (R) ANITLsGK (K) ANIT(0.0)LS(0.99)GK K:TMT10,s:Phosphorylated S C11orf98 14233.5 2 1 2721.1 72.91 HUMAN 1 18.8035 -40.6266 ARAQRAGSPNTPPPR-p Q1RMZ1;S18-p ARAQRAGSPNTPPPR 0.908771749351651 0.0535300280915999 0.0276666666666666 0.277333333333333 0.816249533020056 16.9520181227804 0.0276666666666667 0.277333333333333 0.828657464283324 0.0201742866701706 0.227129436069653 3.25072204286988 Q1RMZ1 C7orf60 Q1RMZ1.S18.p_C7orf60 Q1RMZ1_S18s _1_1_18_18 Q1RMZ1 Q1RMZ1 Probable methyltransferase BMT2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4259.4259.3 11.18 11.18 1.351 2 1 1 0 615.6335 1764.919 S18s TMT10 16 (R) AGsPNTPPPREQER (K) AGS(0.99)PNT(0.0)PPPREQER s:Phosphorylated S BMT2 46950.6 1 1 6522.1 11.18 HUMAN 1 0.8162 16.952 ARAQSPSSGDEPEPS-p Q9HCM7;S34-p ARAQSPSSGDEPEPS 0.697222520756474 0.0549443464334015 0.107666666666667 0.524 2.94168297409881 16.7901204643436 0.107666666666667 0.524 0.507962559217566 0.0209405437029044 0.70854235852153 3.21899566593283 Q9HCM7 FBRSL1 Q9HCM7.S34.p_FBRSL1 Q9HCM7_S31sS33sS34s_3_3_31_34 Q9HCM7 Q9HCM7 Fibrosin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11199.11199.3 7.1 7.1 3.725 4 3 3 0 756.6469 2028.0286 S31s S33s S34s TMT10 29 (R) AQsPssGDEPEPSPGK (E) AQS(0.99)PS(0.99)S(0.99)GDEPEPS(0.0)PGK K:TMT10,s:Phosphorylated S FBRSL1 111247 1 14 716.1 237.81 HUMAN 1 2.9417 16.7901 ARARRTESFHSYRDF-p Q9Y597;S664-p ARARRTESFHSYRDF 0.850329083846723 0.0182252708663151 0.0313333333333333 -0.333333333333333 1.36273308027972 23.9398683562201 0.0313333333333333 -0.333333333333333 0.730679111446503 0.00403657628492776 0.362544515007178 -4.77455985473512 Q9Y597 KCTD3 Q9Y597.S664.p_KCTD3 Q9Y597_S664s _1_1_664_664 Q9Y597 Q9Y597|Q9Y597-2|Q9Y597-3 BTB/POZ domain-containing protein KCTD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13531.13531.4 15.17 15.17 1.34 5 1 1 0 649.0674 2513.2847 S664s TMT10 661 (R) RTEsFHSYRDFQTINLNR (N) RT(0.0)ES(0.99)FHS(0.0)Y(0.0)RDFQT(0.0)INLNR s:Phosphorylated S KCTD3 89667 7 8 417.1 320.81 HUMAN 1 1.3627 -23.9399 ARATSWYSPY_____-p Q86U42;S304-p ARATSWYSPY_____ 0.573919794840568 0.00590860812337549 0.245333333333333 -0.513666666666667 4.43796641401904 32.1990719894232 0.245333333333333 -0.513666666666667 0.35991782739856 0.00060268835616935 0.9999748831967 -7.11773494537693 Q86U42 PABPN1 Q86U42.S304.p_PABPN1 Q86U42_S304s _1_1_304_304 Q86U42 Q92843-2|Q86U42|G3V4T2 Polyadenylate-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22037.22037.2 9.58 9.58 1.342 5 1 1 0 642.2821 1203.5884 S304s TMT10 299 (R) ATSWYsPY (-) AT(0.0)S(0.0)WY(0.0)S(0.99)PY(0.0) s:Phosphorylated S PABPN1 32862.6 1 5 1523.1 134.21 HUMAN 1 4.438 -32.1991 ARAVLSDSPQLSEGK-p Q7Z4H7;S552-p ARAVLSDSPQLSEGK 0.315545416757151 0.0209167488563846 -0.141666666666667 -0.323666666666667 9.37541577536356 22.9704365858188 -0.141666666666667 -0.323666666666667 0.115467143598635 0.00504610567724478 -1.87337115932537 -4.54236317780415 Q7Z4H7 HAUS6 Q7Z4H7.S552.p_HAUS6 Q7Z4H7_S552s _1_1_552_552 Q7Z4H7 Q7Z4H7|Q7Z4H7-3|Q5VY60|Q7Z4H7-2 HAUS augmin-like complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36471.36471.5 16.66 16.66 1.668 6 1 1 0 851.4646 4173.3262 S552s TMT10 547 (R) AVLSDsPQLSEGKEIKLEELIDSLGSNPFLTR (N) AVLS(0.0)DS(0.99)PQLS(0.0)EGKEIKLEELIDS(0.0)LGS(0.0)NPFLT(0.0)R K:TMT10,s:Phosphorylated S HAUS6 109703.4 4 5 1302.1 156.27 HUMAN 1 -9.3754 -22.9704 ARDAERKSLYTLFLE-p A0A0G2JQX1;S591-p ARDAERKSLYTLFLE 0.110389830666072 0.0940306432368947 -0.343333333333333 -0.285666666666667 20.0266202560758 13.5783787914608 -0.343333333333333 -0.285666666666667 0.00993889206828388 0.0438694430554427 -3.88466569049932 -2.61431733135021 A0A0G2JQX1 NotFound A0A0G2JQX1.S591.p_NotFound A0A0G2JQX1_S591s _1_1_591_591 A0A0G2JQX1 A0A0G2JSA7|A0A087X1Z1|Q96RT8|Q96RT8-2|A0A0G2JPW5|A0A0G2JQX1 Gamma-tubulin complex component HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.36161.36161.3 15.18 15.18 1.719 5 1 1 0 617.9864 1771.9792 S591s TMT10 591 (K) sLYTLFLESVQSR (L) S(0.99)LY(0.0)T(0.0)LFLES(0.0)VQS(0.0)R s:Phosphorylated S TUBGCP5 119620.1 1 1 5931.1 15.18 HUMAN 1 -20.0266 -13.5784 ARDAMNLSGRRGSKG-p Q9H4A3-7;S2716-p ARDAMNLSGRRGSKG 0.0886088616153149 0.00313569181156438 -0.502 -0.654333333333333 22.4270096042949 37.6109503140074 -0.502 -0.654333333333333 0.00571872271826537 0.000173342465193272 -4.42026455500954 -9.1070135361876 Q9H4A3 WNK1 Q9H4A3.7.S2716.p_WNK1 Q9H4A3-7_S2716s _1_1_2716_2716 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6352.6352.2 10.15 2.42 99 1 1 1 0 664.8208 1248.668 S2716s TMT10 2711 (R) DAMNLsGRR (G) DAMNLS(1.0)GRR s:Phosphorylated S WNK1 301202.7 4 23 162.1 495.27 HUMAN 1 -22.427 -37.611 ARDARAQSPSSGDEP-p Q9HCM7;S31-p ARDARAQSPSSGDEP 0.697222520756474 0.0549443464334015 0.107666666666667 0.524 2.94168297409881 16.7901204643436 0.107666666666667 0.524 0.507962559217566 0.0209405437029044 0.70854235852153 3.21899566593283 Q9HCM7 FBRSL1 Q9HCM7.S31.p_FBRSL1 Q9HCM7_S31sS33sS34s_3_3_31_34 Q9HCM7 Q9HCM7 Fibrosin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11199.11199.3 7.1 7.1 3.725 4 3 3 0 756.6469 2028.0286 S31s S33s S34s TMT10 29 (R) AQsPssGDEPEPSPGK (E) AQS(0.99)PS(0.99)S(0.99)GDEPEPS(0.0)PGK K:TMT10,s:Phosphorylated S FBRSL1 111247 1 14 716.1 237.81 HUMAN 1 2.9417 16.7901 ARDERSDSRAQAVSE-p P55884-2;S119-p ARDERSDSRAQAVSE 0.164162708749184 0.0839201829240207 -0.555666666666667 -0.631333333333333 15.7189204492628 14.2481490010126 -0.555666666666667 -0.631333333333334 0.0267983438385689 0.0375997623438348 -3.01440420773982 -2.7369167014529 P55884 EIF3B P55884.2.S119.p_EIF3B P55884-2_S119s _1_1_119_119 P55884-2 P55884-2 Isoform 2 of Eukaryotic translation initiation factor 3 subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4628.4628.2 13.22 5.99 1.208 3 1 1 0 1057.9684 2034.9638 S119s TMT10 117 (R) SDsRAQAVSEDAGGNEGR (A) S(0.0)DS(0.99)RAQAVS(0.0)EDAGGNEGR s:Phosphorylated S EIF3B 99769.3 6 2 1156.1 171.77 HUMAN 1 -15.7189 -14.2481 ARDERYRSDIHTEAV-p Q9P265;S100-p ARDERYRSDIHTEAV 0.530911027960293 0.011511877183827 0.140333333333333 -0.645333333333333 5.08751104466453 27.1306927380986 0.140333333333333 -0.645333333333333 0.30991949487257 0.0019361131121546 1.12007104939469 -5.59668309834002 Q9P265 DIP2B Q9P265.S100.p_DIP2B Q9P265_S100s _1_1_100_100 Q9P265 Q9P265 Disco-interacting protein 2 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15794.15794.4 20.24 17.53 1.173 3 1 1 0 578.5615 2231.2548 S100s TMT10 98 (R) YRsDIHTEAVQAALAK (H) Y(0.0)RS(0.99)DIHT(0.0)EAVQAALAK K:TMT10,s:Phosphorylated S DIP2B 173713.6 7 4 1010.1 188.94 HUMAN 1 5.0875 -27.1307 ARDKQSPSQANGCSD-p Q9NPI6;S144-p ARDKQSPSQANGCSD 0.670375570853073 0.119464099601837 0.057 0.174 3.25235378449539 12.1680907880283 0.057 0.174 0.472894890437741 0.0607003116980604 0.771218261775836 2.36098764210745 Q9NPI6 DCP1A Q9NPI6.S144.p_DCP1A Q9NPI6_S144s _1_1_144_144 Q9NPI6 Q9NPI6|Q9NPI6-2 mRNA-decapping enzyme 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23923.23923.5 26.75 26.75 1.102 4 1 1 0 679.3365 3312.6829 S144s TMT10 139 (R) DKQSPsQANGCSDHRPIDILEMLSR (A) DKQS(0.0)PS(0.99)QANGCS(0.0)DHRPIDILEMLS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DCP1A 63479.5 7 2 344.1 352.95 HUMAN 1 3.2524 12.1681 ARDMNGKSLDGKAIK-p P38159;S73-p ARDMNGKSLDGKAIK 0.250463232223352 0.0827423909058082 0.237666666666667 0.259666666666667 11.4757564592102 14.3316747746729 0.237666666666667 0.259666666666667 0.0711908788093543 0.0368835336757763 2.23967825406562 2.75232182471334 P38159 RBMX P38159.S73.p_RBMX P38159_S73s _1_1_73_73 P38159 O75526|P38159|Q96E39|P38159-2|H3BT71 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11008.11008.3 10.4 5.34 99 1 1 1 0 611.3247 1751.9929 S73s TMT10 68 (R) DMNGKsLDGK (A) DMNGKS(1.0)LDGK K:TMT10,s:Phosphorylated S RBMX 42331.1 3 3 102.1 595.29 HUMAN 1 11.4758 14.3317 AREESEESEAEPVQR-p Q9BW71;S199-p AREESEESEAEPVQR 0.10003796765691 0.0371818889146831 0.798 0.351333333333333 21.1587747062175 19.2183165152927 0.798 0.351333333333333 0.00765812638462728 0.0119720452175664 4.13216775085818 3.70986495859386 Q9BW71 HIRIP3 Q9BW71.S199.p_HIRIP3 Q9BW71_S199s _1_1_199_199 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4364.4364.4 15.31 9.89 6.193 2 1 1 0 635.8153 2460.2731 S199s TMT10 190 (R) KQAREESEEsEAEPVQR (T) KQAREES(0.0)EES(0.99)EAEPVQR K:TMT10,s:Phosphorylated S HIRIP3 62298.3 2 8 178.1 481.23 HUMAN 1 21.1588 19.2183 AREGTPGSPGRGREG-p Q99856;S101-p AREGTPGSPGRGREG 0.862439737837176 0.902416198316862 0.0536666666666666 -0.0333333333333333 1.25601140388821 0.621306461306828 0.0536666666666666 -0.0333333333333333 0.748856941138829 0.866701112187629 0.33691824289241 -0.175972706300486 Q99856 ARID3A Q99856.S101.p_ARID3A Q99856_S101s _1_1_101_101 Q99856 Q99856 AT-rich interactive domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3833.3833.2 7.48 7.48 7.483 2 1 1 0 690.3352 1299.6967 S101s TMT10 96 (R) EGTPGsPGRGR (E) EGT(0.0)PGS(0.99)PGRGR s:Phosphorylated S ARID3A 62944.9 2 3 2804.1 70.06 HUMAN 1 1.256 -0.6213 AREHQLASASELPLG-p O60232;S103-p AREHQLASASELPLG 0.1560557092084 0.636812582303975 0.241 -0.07 16.2125027438258 2.66690274388133 0.241 -0.07 0.023919369383678 0.541140110026684 3.10910008018664 -0.651818750875899 O60232 SSSCA1 O60232.S103.p_SSSCA1 O60232_S103s _1_1_103_103 O60232 O60232|G3V1B8 Sjoegren syndrome/scleroderma autoantigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15959.15959.5 21.64 16.41 1.11 3 1 1 0 859.4473 4213.2341 S103s TMT10 98 (R) EHQLAsASELPLGSRPAPQPPVPRPEHCEGAAAGLK (A) EHQLAS(0.99)AS(0.0)ELPLGS(0.0)RPAPQPPVPRPEHCEGAAAGLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SSSCA1 21930.4 2 3 2328.1 87.72 HUMAN 1 16.2125 -2.6669 AREIRRFSFCCSPEP-p Q13501;S24-p AREIRRFSFCCSPEP 0.932098009206702 0.0350573941246243 0.0133333333333333 0.263 0.605516689315712 19.5910341869994 0.0133333333333333 0.263 0.86985793807319 0.0109874416393751 0.171772102080656 3.78827372909565 Q13501 SQSTM1 Q13501.S24.p_SQSTM1 Q13501_S24s _1_1_24_24 Q13501 Q13501|E7EMC7|C9J6J8|D6RBF1 Sequestosome-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17515.17515.5 18.77 18.77 1.178 2 1 1 0 619.0648 3011.3283 S24s TMT10 22 (R) RFsFCCSPEPEAEAEAAAGPGPCER (L) RFS(0.99)FCCS(0.0)PEPEAEAEAAAGPGPCER C:Carbamidomethylation,s:Phosphorylated S SQSTM1 48485.1 4 1 541.1 276.49 HUMAN 1 0.6055 19.591 AREPGGRSPAFVQLA-p P51610;S1205-p AREPGGRSPAFVQLA 0.908176418012531 0.959017715748572 -0.0173333333333334 0.00866666666666669 0.822945808881703 0.262363604879929 -0.0173333333333334 0.00866666666666667 0.82738076298129 0.941377121867808 -0.228856918180391 0.0770105353053 P51610 HCFC1 P51610.S1205.p_HCFC1 P51610_S1205s _1_1_1205_1205 P51610 A6NEM2|P51610-4|P51610-2 Host cell factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22079.22079.4 18.13 18.13 18.126 3 1 1 0 595.5777 2299.3174 S1205s TMT10 1200 (R) EPGGRsPAFVQLAPLSSK (V) EPGGRS(0.99)PAFVQLAPLS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S HCFC1 210725.7 3 8 625.1 258.74 HUMAN 1 -0.8229 0.2624 ARERPGGSPRGPVTS-p Q9H7X3;S86-p ARERPGGSPRGPVTS 0.597918768837268 0.0087656362574882 0.0756666666666667 0.543 4.12551681104794 29.1668337679109 0.0756666666666667 0.543 0.386766026682542 0.00121148104420152 0.941047481199289 6.17315312658578 Q9H7X3 ZNF696 Q9H7X3.S86.p_ZNF696 Q9H7X3_S86s _1_1_86_86 Q9H7X3 Q9H7X3 Zinc finger protein 696 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3403.3403.2 9.39 3.81 99 1 1 1 0 582.79 1084.6061 S86s TMT10 81 (R) ERPGGsPR (G) ERPGGS(1.0)PR s:Phosphorylated S ZNF696 41715.4 4 1 5722.1 16.85 HUMAN 1 4.1255 29.1668 ARESLCDSPHQNLSR-p O15042;S67-p ARESLCDSPHQNLSR 0.166553758928775 0.539355293601194 0.249333333333333 0.0716666666666667 15.5698132550492 3.60678621249783 0.249333333333333 0.0716666666666667 0.0277343935890972 0.43583427258123 2.98601897804063 0.841045880583293 O15042 U2SURP O15042.S67.p_U2SURP O15042_S67s _1_1_67_67 O15042 O15042|O15042-2|E7ET15|E7EW00 U2 snRNP-associated SURP motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14518.14518.4 22.51 22.51 4.557 3 1 1 0 694.6033 2695.4238 S67s TMT10 62 (R) ESLCDsPHQNLSRPLLENK (L) ES(0.0)LCDS(0.99)PHQNLS(0.0)RPLLENK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S U2SURP 118746.2 7 3 360.1 345.29 HUMAN 1 15.5698 3.6068 ARFAVAYSPARDAGN-p O14939;S134-p ARFAVAYSPARDAGN 0.150059860725025 0.135597810974631 -0.247666666666667 -0.237 16.6098575818155 11.4365461521412 -0.247666666666667 -0.237 0.0218280149127618 0.0718365364229494 -3.18618295765866 -2.23172066709973 O14939 PLD2 O14939.S134.p_PLD2 O14939_S134s _1_1_134_134 O14939 O14939|O14939-4 Phospholipase D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16279.16279.2 12.91 12.91 7.003 2 1 1 0 645.826 1210.6782 S134s TMT10 129 (R) FAVAYsPAR (D) FAVAY(0.0)S(0.99)PAR s:Phosphorylated S PLD2 106783.9 1 1 2678.2 74.24 HUMAN 1 -16.6099 -11.4365 ARFPQLDSTSFANSR-p P49327;S1717-p ARFPQLDSTSFANSR 0.703058298151312 0.997079539467471 0.0516666666666667 0.0026666666666667 2.8754626446912 0.0179465128012452 0.0516666666666667 0.000406439080283255 0.515767218558906 0.995876189072342 0.695001821640964 0.00541098364812821 P49327 FASN P49327.S1717.p_FASN P49327_S1717s _1_1_1717_1717 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22453.22453.2 7.29 3.5 1.135 4 1 1 0 889.9199 1698.8649 S1717s TMT10 1712 (R) FPQLDsTSFANSR (D) FPQLDS(0.99)T(0.0)S(0.0)FANS(0.0)R s:Phosphorylated S FASN 276046.1 2 19 175.1 481.87 HUMAN 1 2.8755 0.0179 ARFPYSPSPPMANGA-p Q92908;S268-p ARFPYSPSPPMANGA 0.398962840085262 0.805829683546797 -0.124 0.0403333333333334 7.36401894898068 1.31311651787825 -0.124 0.0403333333333334 0.18348396020319 0.739074721178468 -1.52459430238482 0.350639503430912 Q92908 GATA6 Q92908.S268.p_GATA6 Q92908_S268s _1_1_268_268 Q92908 Q92908|Q92908-2 Transcription factor GATA-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20013.20013.3 11.72 11.72 2.01 3 1 1 0 624.6299 1791.905 S268s TMT10 263 (R) FPYSPsPPMANGAAR (E) FPY(0.0)S(0.0)PS(0.99)PPMANGAAR s:Phosphorylated S GATA6 60830.3 1 2 3524.1 49.06 HUMAN 1 -7.364 1.3131 ARFVSSGSGGGYGGG-p P19012;S56-p ARFVSSGSGGGYGGG 0.334386830924984 0.561509274896409 0.15 0.0676666666666667 8.8801110555914 3.37772738375126 0.15 0.0676666666666667 0.129416274735073 0.459438369093696 1.7876096540636 0.796022066963311 P19012 KRT15 P19012.S56.p_KRT15 P19012_S56s _1_1_56_56 P19012 P19012 Keratin, type I cytoskeletal 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14163.14163.3 13.22 13.22 1.144 4 1 1 0 562.2501 1604.7689 S56s TMT10 51 (R) FVSSGsGGGYGGGMR (V) FVS(0.0)S(0.0)GS(0.99)GGGY(0.0)GGGMR s:Phosphorylated S KRT15 49439.1 2 29 383.2 334.07 HUMAN 1 8.8801 3.3777 ARGAPPGSPEPPALL-p Q9Y4B5;S263-p ARGAPPGSPEPPALL 0.55254889595881 0.962071702222897 0.0786666666666667 -0.00566666666666663 4.75586055956639 0.239910254540078 0.0786666666666667 -0.00566666666666664 0.334513727001695 0.946256715233091 1.05912223423519 -0.0705872157175584 Q9Y4B5 MTCL1 Q9Y4B5.S263.p_MTCL1 Q9Y4B5_S263s _1_1_263_263 Q9Y4B5 Q9Y4B5 Microtubule cross-linking factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27140.27140.4 21.38 21.38 99 1 1 1 0 666.0913 2581.3758 S263s TMT10 258 (R) GAPPGsPEPPALLAAPLAAGACPGGR (S) GAPPGS(1.0)PEPPALLAAPLAAGACPGGR C:Carbamidomethylation,s:Phosphorylated S MTCL1 210777.5 3 4 1389.1 147.22 HUMAN 1 4.7559 -0.2399 ARGKRSLTRSPPAIR-p Q9UQ35;T2069-p ARGKRSLTRSPPAIR 0.732651492896551 0.559030464172909 -0.106833333333333 0.210666666666667 2.55911781930564 3.40484598444704 -0.106833333333333 0.210666666666667 0.554738385306733 0.456578441735221 -0.629347813536295 0.801385545574436 Q9UQ35 SRRM2 Q9UQ35.T2069.p_SRRM2 Q9UQ35_S2067sT2069t_2_2_2067_2069 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8297.8503.2 9.32 6.36 1.908 3 2 2 0 629.2916 1097.6426 S2067s T2069t Hydrogen 2067 (R) sLtRSPPAIR (R) S(0.99)LT(0.99)RS(0.0)PPAIR s:Phosphorylated S,t:Phosphorylated T SRRM2 300351.7 4 236 2.1 3310.34 HUMAN 2 -2.5591 3.4048 ARGMKRESELELPVP-p O43251-8;S26-p ARGMKRESELELPVP 0.172710497281487 0.799269360430265 0.247666666666667 -0.0296666666666666 15.1857057848856 1.3607412439688 0.247666666666667 -0.0296666666666666 0.0302990785843355 0.731014304972155 2.91335356092211 -0.362031912973006 O43251 RBFOX2 O43251.8.S26.p_RBFOX2 O43251-8_S26s _1_1_26_26 O43251-8 O43251-8 Isoform 8 of RNA binding protein fox-1 homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21079.21079.4 14.97 11.11 13.784 2 1 1 0 834.4382 3254.7658 S26s TMT10 21 (R) GMKREsELELPVPGAGGDGADPGLSK (R) GMKRES(0.99)ELELPVPGAGGDGADPGLS(0.0)K K:TMT10,s:Phosphorylated S RBFOX2 47342.4 1 1 3970.1 39.99 HUMAN 1 15.1857 -1.3607 ARGPYHWSPSRKAGR-p Q504T8;S419-p ARGPYHWSPSRKAGR 0.772883727112607 0.00800627488816744 -0.0433333333333334 -0.449 2.13909170288231 29.8805003191527 -0.0433333333333334 -0.449 0.611069812601709 0.00102789787465132 -0.539389217878921 -6.38577894125428 Q504T8 MIDN Q504T8.S419.p_MIDN Q504T8_S419s _1_1_419_419 Q504T8 Q504T8 Midnolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9698.9698.3 13.06 13.06 1.366 3 1 1 0 465.8849 1315.6745 S419s TMT10 414 (R) GPYHWsPSR (K) GPY(0.0)HWS(0.99)PS(0.0)R s:Phosphorylated S MIDN 49839.4 2 1 5208.1 21.78 HUMAN 1 -2.1391 -29.8805 ARGRRTRSPSPTLGE-p Q86UU1;S518-p ARGRRTRSPSPTLGE 0.79813572883131 0.135464638890742 -0.0423333333333333 -0.159 1.88705412385589 11.4432022660398 -0.0423333333333333 -0.159 0.647581729941354 0.0717265221443635 -0.483641496605791 -2.23289132281918 Q86UU1 PHLDB1 Q86UU1.S518.p_PHLDB1 Q86UU1_S518s _1_1_518_518 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10244.10244.4 10.9 10.9 1.109 5 1 1 0 497.512 1907.0548 S518s Hydrogen 516 (R) TRsPSPTLGESLAPHK (G) T(0.0)RS(0.99)PS(0.0)PT(0.0)LGES(0.0)LAPHK K:TMT10-Lys-Only,s:Phosphorylated S PHLDB1 152129.1 6 13 99.1 600.41 HUMAN 1 -1.8871 -11.4432 ARGSASYSPPRKRSS-p P0DPB5;S104-p ARGSASYSPPRKRSS 0.511782531396783 0.859570778816165 -0.106333333333333 0.0233333333333334 5.37910156629624 0.926147304197105 -0.106333333333333 0.0233333333333334 0.289794302898112 0.807951459084518 -1.17309905293016 0.255224368713761 P0DPB5 NotFound P0DPB5.S104.p_NotFound P0DPB5_S104s _1_1_104_104 P0DPB5 P0DPB5|A0A087WTY1 Protein POLR1D, isoform 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6532.6532.3 10.32 10.32 2.14 4 1 1 0 410.8621 1150.6054 S104s TMT10 99 (R) GSASYsPPR (K) GS(0.0)AS(0.0)Y(0.0)S(0.99)PPR s:Phosphorylated S POLR1D 14389 12 1 4297.1 34.04 HUMAN 1 -5.3791 0.9261 ARHVDSLSQRSPKAS-p Q9UHD8;S82-p ARHVDSLSQRSPKAS 0.40198481120648 0.541089948527304 0.127666666666667 0.0596666666666667 7.30280251874775 3.58794954241029 0.127666666666667 0.0596666666666667 0.186088591239684 0.437728723564206 1.5139199957417 0.837366641428366 Q9UHD8 SEPT9 Q9UHD8.S82.p_SEPT9 Q9UHD8_S82s _1_1_82_82 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2|Q9UHD8-7 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5629.5629.4 12.99 12.99 2.178 3 1 1 0 448.7434 1711.9855 S82s TMT10 77 (R) HVDSLsQRSPK (A) HVDS(0.0)LS(0.99)QRS(0.0)PK K:TMT10,s:Phosphorylated S SEPT9 65685.6 20 8 110.1 572.91 HUMAN 1 7.3028 3.5879 ARIEGTASPKEFYAK-p O00291-3;S806-p ARIEGTASPKEFYAK 0.271100102299359 0.0356301505856736 -0.215 -0.323 10.7433963204756 19.4936343863906 -0.215 -0.323 0.0842675501071991 0.0112366424378141 -2.11121283469542 -3.76769949536277 O00291 HIP1 O00291.3.S806.p_HIP1 O00291-3_S806s _1_1_806_806 O00291-3 O00291-3 Isoform 3 of Huntingtin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9657.9657.2 9.55 5.51 1.118 2 1 1 0 670.8653 1260.7564 S806s TMT10 801 (R) IEGTAsPK (E) IEGT(0.0)AS(0.99)PK K:TMT10,s:Phosphorylated S HIP1 111630.6 2 4 3390.1 52.21 HUMAN 1 -10.7434 -19.4936 ARIPERGSGVFRLTV-p Q8IZK6;S18-p ARIPERGSGVFRLTV 0.871756450424755 0.0463462978252902 -0.026 -0.247666666666667 1.16709598668464 17.8503707352995 -0.026 -0.247666666666667 0.764346711339049 0.0164044973030089 -0.315283007957627 -3.42926822283872 Q8IZK6 MCOLN2 Q8IZK6.S18.p_MCOLN2 Q8IZK6_S18s _1_1_18_18 Q8IZK6 Q8IZK6|G5EA24 Mucolipin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12783.12783.3 9.01 9.01 99 1 1 1 0 476.2515 1346.7742 S18s TMT10 13 (R) IPERGsGVFR (L) IPERGS(1.0)GVFR s:Phosphorylated S MCOLN2 67024.4 1 1 4671.1 28.15 HUMAN 1 -1.1671 -17.8504 ARISRSISLGDSEGP-p O43379-4;S1233-p ARISRSISLGDSEGP 0.826776350969775 0.152564120351849 -0.0336666666666667 -0.171666666666667 1.59242754494248 10.7385635307398 -0.0336666666666667 -0.171666666666667 0.693038315037797 0.0843613744689759 -0.416523052385438 -2.10944329610217 O43379 WDR62 O43379.4.S1233.p_WDR62 O43379-4_S1233s _1_1_1233_1233 O43379-4 O43379-4 Isoform 4 of WD repeat-containing protein 62 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.32220.32220.3 22.29 22.29 1.134 4 1 1 0 778.4149 2253.2652 S1233s TMT10 1231 (R) SIsLGDSEGPIVATLAQPLR (R) S(0.0)IS(0.99)LGDS(0.0)EGPIVAT(0.0)LAQPLR s:Phosphorylated S WDR62 168676.3 6 10 671.1 248.72 HUMAN 1 -1.5924 -10.7386 ARIYSSDSDEGSEED-p Q8WVC0;S610-p ARIYSSDSDEGSEED 0.93698049113563 0.0116104761172102 -0.0138333333333333 0.549833333333333 0.549709773901797 27.0671829365611 -0.0138333333333333 0.549833333333334 0.881107752853725 0.00196463422916379 -0.156772146414734 5.57938743265812 Q8WVC0 LEO1 Q8WVC0.S610.p_LEO1 Q8WVC0_S610sS614s_2_2_610_614 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10860.10860.3 11.56 11.56 1.242 5 2 2 0 845.3627 2374.141 S610s S614s TMT10 605 (R) IYSSDsDEGsEEDKAQR (L) IY(0.0)S(0.0)S(0.0)DS(0.99)DEGS(0.99)EEDKAQR K:TMT10,s:Phosphorylated S LEO1 75516.9 9 21 514.1 286.88 HUMAN 2 -0.5497 27.0672 ARKASPPSGLWSPAY-p Q8TEM1;S1877-p ARKASPPSGLWSPAY 0.760887246990578 0.0243200863297958 -0.0423333333333333 -0.656 2.27767371892078 21.9902956431387 -0.0423333333333334 -0.656 0.591878586686163 0.00632368801816821 -0.569453105473565 -4.3151499807299 Q8TEM1 NUP210 Q8TEM1.S1877.p_NUP210 Q8TEM1_S1877s _1_1_1877_1877 Q8TEM1 Q8TEM1 Nuclear pore membrane glycoprotein 210 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18305.18305.4 15.21 15.21 1.139 5 1 1 0 549.2835 2114.1435 S1877s TMT10 1872 (R) KASPPsGLWSPAYASH (-) KAS(0.0)PPS(0.99)GLWS(0.0)PAY(0.0)AS(0.0)H K:TMT10,s:Phosphorylated S NUP210 206020.3 5 2 4157.1 36.52 HUMAN 1 -2.2777 -21.9903 ARKAWENSPNVREKG-p Q9Y520-7;S2262-p ARKAWENSPNVREKG 0.328079739434141 0.023345939998049 -0.224666666666667 -0.370333333333333 9.05280548889125 22.2626993662758 -0.224666666666667 -0.370333333333333 0.124371093026434 0.00593922889875042 -1.8175042884578 -4.37756128841912 Q9Y520 PRRC2C Q9Y520.7.S2262.p_PRRC2C Q9Y520-7_S2262s _1_1_2262_2262 Q9Y520-7 Q9Y520-7 Isoform 7 of Protein PRRC2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10008.10008.3 11.35 7.59 99 1 1 1 0 623.3214 1787.9805 S2262s TMT10 2258 (K) AWENsPNVREK (G) AWENS(1.0)PNVREK K:TMT10,s:Phosphorylated S PRRC2C 317703.2 1 111 36.3 882.05 HUMAN 1 -9.0528 -22.2627 ARKEGASSPVNGKDL-p Q9HAQ2;S515-p ARKEGASSPVNGKDL 0.79813572883131 0.0762980432007773 -0.0616666666666667 0.277 1.88878685417179 14.8298832132684 -0.0616666666666667 0.277 0.647323411972864 0.0328860474189709 -0.484029763554367 2.84477554017647 Q9HAQ2 KIF9 Q9HAQ2.S515.p_KIF9 Q9HAQ2_S515s _1_1_515_515 Q9HAQ2 Q9HAQ2 Kinesin-like protein KIF9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6350.6350.3 9.68 5.2 1.474 2 1 1 0 614.343 1761.0474 S515s TMT10 510 (R) KEGASsPVNGK (D) KEGAS(0.0)S(0.99)PVNGK K:TMT10,s:Phosphorylated S KIF9 90327.2 1 1 6763.1 9.68 HUMAN 1 -1.8888 14.8299 ARKRHAPSPEPAVQG-p P13051;S23-p ARKRHAPSPEPAVQG 0.830891601342691 0.00138078039709077 0.0476666666666667 -1.27266666666667 1.5486341403408 46.3708574358208 0.0476666666666667 -1.27266666666667 0.700062131490796 2.30629180820858e-05 0.406349475197787 -13.4046932378763 P13051 UNG P13051.S23.p_UNG P13051_S23s _1_1_23_23 P13051 P13051 Uracil-DNA glycosylase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16204.16204.4 29.1 29.1 6.803 3 1 1 0 927.2403 3625.9793 S23s TMT10 20 (R) HAPsPEPAVQGTGVAGVPEESGDAAAIPAKK (A) HAPS(0.99)PEPAVQGT(0.0)GVAGVPEES(0.0)GDAAAIPAKK K:TMT10,s:Phosphorylated S UNG 34816 16 3 1324.1 154.1 HUMAN 1 1.5486 -46.3709 ARKTGLITPKAGFDS-p P52701;T928-p ARKTGLITPKAGFDS 0.958911565707368 0.854309420191653 -0.0106666666666667 0.036 0.353053856597308 0.96340034631237 -0.0106666666666667 0.036 0.921922924669971 0.801050628254948 -0.102669349517692 0.264646484877418 P52701 MSH6 P52701.T928.p_MSH6 P52701_T928t _1_1_928_928 P52701 P52701|P52701-3 DNA mismatch repair protein Msh6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15274.15274.2 9.89 4.58 3.415 2 1 1 0 634.3756 1187.7764 T928t TMT10 924 (K) TGLItPK (A) T(0.0)GLIT(0.99)PK K:TMT10,t:Phosphorylated T MSH6 154608.6 1 14 875.1 209.27 HUMAN 1 -0.3531 0.9634 ARKTMRVSDRQQLEA-p Q6VMQ6-4;S29-p ARKTMRVSDRQQLEA 0.797447525031717 0.0087213953650246 -0.0393333333333334 -0.845666666666667 1.89656835008196 29.199282868248 -0.0393333333333334 -0.845666666666667 0.646164605052563 0.00120246297575124 -0.48577253907969 -6.18269760674172 Q6VMQ6 ATF7IP Q6VMQ6.4.S29.p_ATF7IP Q6VMQ6-4_S29s _1_1_29_29 Q6VMQ6-4 Q6VMQ6-4|Q6VMQ6-5|Q6VMQ6-2 Isoform 3 of Activating transcription factor 7-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14374.14374.3 7.84 7.84 7.845 2 1 1 0 658.6866 1894.0798 S29s TMT10 28 (R) VsDRQQLEAVYK (V) VS(0.99)DRQQLEAVY(0.0)K K:TMT10,s:Phosphorylated S ATF7IP 138346.3 1 1 273.1 392.91 HUMAN 1 -1.8966 -29.1993 ARLAREKSQDGGELT-p Q9NSC5;S120-p ARLAREKSQDGGELT 0.584672854353861 0.231655914569119 0.0866666666666667 0.119333333333333 4.28958531228327 8.36642372100053 0.0866666666666667 0.119333333333333 0.372427265914152 0.145665809914648 0.972094965400648 1.6981088681846 Q9NSC5 HOMER3 Q9NSC5.S120.p_HOMER3 Q9NSC5_S120s _1_1_120_120 Q9NSC5 Q9NSC5|Q9NSC5-2 Homer protein homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22904.22904.5 17.47 14.57 1.149 6 1 1 0 871.0521 4271.2763 S120s TMT10 118 (R) EKsQDGGELTSPALGLASHQVPPSPLVSANGPGEEK (L) EKS(0.99)QDGGELT(0.0)S(0.0)PALGLAS(0.0)HQVPPS(0.0)PLVS(0.0)ANGPGEEK K:TMT10,s:Phosphorylated S HOMER3 39835.6 5 1 1577.1 130.16 HUMAN 1 4.2896 8.3664 ARLDKVLSDMKRHKK-p Q9BTK6;S206-p ARLDKVLSDMKRHKK 0.422374226346714 0.0010340752520887 0.166333333333333 -1.40566666666667 6.89550135508602 51.295156252353 0.166333333333333 -1.40566666666667 0.204385397727444 7.42137496313716e-06 1.44270859409557 -16.5958820667122 Q9BTK6 PAGR1 Q9BTK6.S206.p_PAGR1 Q9BTK6_S206s _1_1_206_206 Q9BTK6 Q9BTK6 PAXIP1-associated glutamate-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13770.13770.3 9.91 4.93 99 1 1 1 0 462.9241 1306.7917 S206s TMT10 204 (K) VLsDMKR (H) VLS(1.0)DMKR K:TMT10,s:Phosphorylated S PAGR1 27829.6 1 1 2728.1 72.58 HUMAN 1 6.8955 -51.2952 ARLEPLYSPIRSKLS-p Q9UBB9;S568-p ARLEPLYSPIRSKLS 0.495458193368512 0.460945870089644 0.100666666666667 0.0983333333333333 5.61739472552234 4.48507797326794 0.100666666666667 0.0983333333333333 0.274321929898014 0.356034597730401 1.21609260667834 1.00860283444501 Q9UBB9 TFIP11 Q9UBB9.S568.p_TFIP11 Q9UBB9_S568s _1_1_568_568 Q9UBB9 Q9UBB9 Tuftelin-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21819.21819.2 9.25 7.92 6.794 2 1 1 0 698.8738 1316.7776 S568s TMT10 563 (R) LEPLYsPIR (S) LEPLY(0.0)S(0.99)PIR s:Phosphorylated S TFIP11 97217.4 1 6 1343.1 151.47 HUMAN 1 5.6174 4.4851 ARLEQNGSPLGRGRL-p Q01826-2;S38-p ARLEQNGSPLGRGRL 0.197549381060386 0.0287364140753234 -0.198333333333333 -0.367 13.7313838763559 20.8731052071479 -0.198333333333333 -0.367 0.0423507994017605 0.0081787979466951 -2.64373121183157 -4.06486693414498 Q01826 SATB1 Q01826.2.S38.p_SATB1 Q01826-2_S38s _1_1_38_38 Q01826-2 Q01826-2|H0YN86 Isoform 2 of DNA-binding protein SATB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10492.10492.2 13.29 13.29 99 1 1 1 0 690.348 1299.7218 S38s TMT10 33 (R) LEQNGsPLGR (G) LEQNGS(1.0)PLGR s:Phosphorylated S SATB1 89467.4 14 1 821.1 218.79 HUMAN 1 -13.7314 -20.8731 ARLERRHSALQRHST-p Q96L93-2;S1017-p ARLERRHSALQRHST 0.736726660085958 0.0580220967772217 -0.153333333333333 0.240333333333333 2.5145695321634 16.4707448177179 -0.153333333333333 0.240333333333333 0.560457966578407 0.0225385264188517 -0.619965424913372 3.15679579225889 Q96L93 KIF16B Q96L93.2.S1017.p_KIF16B Q96L93-2_S1017s _1_1_1017_1017 Q96L93-2 Q96L93-2|Q96L93-4|Q96L93-6|A0A1B0GTU3 Isoform 2 of Kinesin-like protein KIF16B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.2591.2591.3 8.64 8.64 99 1 1 1 0 392.878 1096.6537 S1017s TMT10 1015 (R) RHsALQR (H) RHS(1.0)ALQR s:Phosphorylated S KIF16B 160684.4 1 10 774.1 227.33 HUMAN 1 -2.5146 16.4707 ARLGSQHSPGRTASL-p Q8IZP0-9;S225-p ARLGSQHSPGRTASL 0.316779561832275 0.349742856794242 0.139 0.0966666666666667 9.34810444930989 6.04932328444722 0.139 0.0966666666666667 0.116195565810232 0.248352005603669 1.86863997261995 1.29303539334771 Q8IZP0 ABI1 Q8IZP0.9.S225.p_ABI1 Q8IZP0-9_S225s _1_1_225_225 Q8IZP0-9 Q8IZP0|Q8IZP0-12|Q8IZP0-9|Q8IZP0-6|Q8IZP0-5|A0A0A0MRT6|Q8IZP0-3|Q8IZP0-4|Q8IZP0-2|Q8IZP0-7|Q8IZP0-8|B6VEX4|Q8IZP0-10|Q8IZP0-11 Isoform 9 of Abl interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3809.3809.3 13.61 13.61 5.122 2 1 1 0 416.5412 1167.6432 S225s TMT10 220 (R) LGSQHsPGR (T) LGS(0.0)QHS(0.99)PGR s:Phosphorylated S ABI1 52580.9 8 6 1517.1 134.48 HUMAN 1 9.3481 6.0493 ARLIKRESGYHENGV-p Q15035;S346-p ARLIKRESGYHENGV 0.0521538298795559 0.0335244668360361 -0.465333333333333 -0.515 27.8618237535862 19.8780851399871 -0.465333333333333 -0.515 0.00163612930954076 0.0102846966362334 -5.80705137391794 -3.84926092667239 Q15035 TRAM2 Q15035.S346.p_TRAM2 Q15035_S346s _1_1_346_346 Q15035 Q15035 Translocating chain-associated membrane protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10347.10347.4 7.96 7.96 7.963 2 1 1 0 624.8541 2416.4279 S346s TMT10 341 (R) LIKREsGYHENGVVK (A) LIKRES(0.99)GY(0.0)HENGVVK K:TMT10,s:Phosphorylated S TRAM2 43783.4 1 2 4369.1 32.65 HUMAN 1 -27.8618 -19.8781 ARLLQDYSELEEENI-p Q8TD16;S182-p ARLLQDYSELEEENI 0.812521070407363 0.46969566607788 0.0373333333333333 0.085 1.7349757204349 4.37449285870573 0.0373333333333333 0.0850000000000001 0.670660036068011 0.365216772441596 0.449276368791477 0.987891872216754 Q8TD16 BICD2 Q8TD16.S182.p_BICD2 Q8TD16_S182sS190s_2_2_182_190 Q8TD16 Q8TD16 Protein bicaudal D homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30742.30742.3 12.3 12.1 8.08 3 2 2 0 890.4313 2509.3438 S182s S190s TMT10 177 (R) LLQDYsELEEENIsLQK (Q) LLQDY(0.0)S(0.99)ELEEENIS(0.99)LQK K:TMT10,s:Phosphorylated S BICD2 93759.7 1 9 1471.1 139.55 HUMAN 1 1.735 4.3745 ARLNGRGSWAQDGDE-p Q9Y2K7;S883-p ARLNGRGSWAQDGDE 0.862492352854935 0.10258567837069 0.025 -0.200333333333333 1.25502650351323 13.0605292945725 0.025 -0.200333333333333 0.749026787441408 0.0494250446750792 0.336680036840075 -2.52058906385499 Q9Y2K7 KDM2A Q9Y2K7.S883.p_KDM2A Q9Y2K7_S883s _1_1_883_883 Q9Y2K7 Q9Y2K7|I3VM54|Q9Y2K7-2|Q9Y2K7-5|Q9Y2K7-4 Lysine-specific demethylase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16915.16915.3 14.83 14.83 5.199 2 1 1 0 801.3563 2322.0883 S883s TMT10 878 (R) LNGRGsWAQDGDESWMQR (E) LNGRGS(0.99)WAQDGDES(0.0)WMQR s:Phosphorylated S KDM2A 135243.8 4 15 409.1 323.7 HUMAN 1 1.255 -13.0605 ARLNIPMSQVNPREA-p P50993;S650-p ARLNIPMSQVNPREA 0.17368064594083 0.011978917001094 -0.276333333333333 -0.546333333333333 15.1505947672671 26.8458410624459 -0.276333333333333 -0.546333333333333 0.0305450276973062 0.00206735897471959 -2.90674335957314 -5.51942051664917 P50993 ATP1A2 P50993.S650.p_ATP1A2 P50993_S650s_1_1_650_650 P50993 P50993|B1AKY9 Sodium/potassium-transporting ATPase subunit alpha-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12300.12300.2 7.26 3.83 4.082 1 1 1 0 797.895 1497.8409 N646n M649m S650s TMT10 645 (R) LnIPmsQVNPR (E) LN(0.99)IPM(1.0)S(1.0)QVN(0.0)PR n:Deamidated,m:Oxidized methionine,s:Phosphorylated S ATP1A2 113575.7 1 10 1313.3 155.17 HUMAN 1 -15.1506 -26.8458 ARLNIPVSQVNPRDA-p P05023-4;S653-p ARLNIPVSQVNPRDA 0.413109090008608 0.355923679719103 -0.170333333333333 -0.128666666666667 7.08392129121464 5.95089367762446 -0.170333333333333 -0.128666666666667 0.195707680998169 0.254044988591382 -1.47569534399698 -1.27550963821201 P05023 ATP1A1 P05023.4.S653.p_ATP1A1 P05023-4_S653s _1_1_653_653 P05023-4 A0A0A0MT26|P13637-3|P13637-2|P05023|P05023-4|P05023-3|M0R116 Isoform 4 of Sodium/potassium-transporting ATPase subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20327.20327.3 11.7 8 99 1 1 1 0 515.9506 1465.8688 S653s TMT10 648 (R) LNIPVsQVNPR (D) LNIPVS(1.0)QVNPR s:Phosphorylated S ATP1A1 114310.4 1 8 1313.1 155.17 HUMAN 1 -7.0839 -5.9509 ARLNRLQTPEKGRPF-p Q8TEW0;T1347-p ARLNRLQTPEKGRPF 0.780946211493183 0.0144251158982194 0.0406666666666667 -0.481666666666667 2.06340326353806 25.5203916293595 0.0406666666666667 -0.481666666666667 0.621812822774719 0.00280518066659512 0.522797809750702 -5.17016614543323 Q8TEW0 PARD3 Q8TEW0.T1347.p_PARD3 Q8TEW0_T1347t _1_1_1347_1347 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11|Q8TEW0-4|Q8TEW0-6|Q5VWV2|Q8TEW0-7|Q8TEW0-3|Q8TEW0-5 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10770.10770.3 9.13 9.13 99 1 1 1 0 546.311 1556.9524 T1347t TMT10 1342 (R) LNRLQtPEK (G) LNRLQT(1.0)PEK K:TMT10,t:Phosphorylated T PARD3 151933.9 1 24 65.1 692.2 HUMAN 1 2.0634 -25.5204 ARLQAKESPQRKKRK-p Q15061;S77-p ARLQAKESPQRKKRK 0.941601783060378 0.0127436554424318 0.0166666666666667 -0.379666666666667 0.513378696075734 26.4096440657374 0.0166666666666667 -0.379666666666667 0.888509611954242 0.00228578613162766 0.146925755334986 -5.40264246050911 Q15061 WDR43 Q15061.S77.p_WDR43 Q15061_S77s _1_1_77_77 Q15061 Q15061 WD repeat-containing protein 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7070.7070.2 11.6 5.37 99 1 1 1 0 797.9392 1514.9055 S77s TMT10 72 (R) LQAKEsPQR (K) LQAKES(1.0)PQR K:TMT10,s:Phosphorylated S WDR43 75859.2 15 1 2318.1 87.99 HUMAN 1 0.5134 -26.4096 ARLQEKLSPPYSSPQ-p Q13263;S752-p ARLQEKLSPPYSSPQ 0.396791069879206 0.406180507571868 0.114666666666667 0.0806666666666667 7.41151306183478 5.20938354968514 0.114666666666667 0.0806666666666667 0.181488325570582 0.301343372944513 1.53287133342072 1.14205486986896 Q13263 TRIM28 Q13263.S752.p_TRIM28 Q13263_S752s _1_1_752_752 Q13263 Q13263|Q13263-2 Transcription intermediary factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19547.19547.3 19.01 19.01 5.241 4 1 1 0 895.7793 2605.3459 S752s Hydrogen 747 (R) LQEKLsPPYSSPQEFAQDVGR (M) LQEKLS(0.99)PPY(0.0)S(0.0)S(0.0)PQEFAQDVGR K:TMT10-Lys-Only,s:Phosphorylated S TRIM28 90316.8 4 21 118.1 555.36 HUMAN 1 7.4115 5.2094 ARLQLELSKVREEFK-p P02545;S107-p ARLQLELSKVREEFK 0.0484160695267182 0.0084172293346623 -0.724333333333333 0.511333333333333 29.1404501067004 29.4661467096692 -0.724333333333333 0.511333333333334 0.00121886326829496 0.00113079877418956 -6.17480706017337 6.26163435293557 P02545 LMNA P02545.S107.p_LMNA P02545_S107s _1_1_107_107 P02545 P02545|P02545-3|P02545-6|P02545-2|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22560.22560.2 10.73 0.65 99 1 1 1 0 684.8993 1288.8241 S107s TMT10 102 (R) LQLELsK (V) LQLELS(1.0)K K:TMT10,s:Phosphorylated S LMNA 74423.5 2 10 60.1 706.83 HUMAN 1 -29.1405 29.4661 ARLRASESPVHRRGS-p Q8IY26;S63-p ARLRASESPVHRRGS 0.722742104433437 0.0561870845760357 -0.0653333333333333 -0.852666666666667 2.66820861644649 16.6608574904727 -0.0653333333333333 -0.852666666666667 0.540977420003787 0.0215731841649051 -0.652176645381239 -3.19375983704263 Q8IY26 PPAPDC2 Q8IY26.S63.p_PPAPDC2 Q8IY26_S63s _1_1_63_63 Q8IY26 Q8IY26 Phospholipid phosphatase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3302.3302.3 7.48 7.48 1.413 2 1 1 0 397.8625 1111.6057 S63s TMT10 60 (R) ASEsPVHR (R) AS(0.0)ES(0.99)PVHR s:Phosphorylated S PLPP6 32478.3 2 1 7144.1 7.48 HUMAN 1 -2.6682 -16.6609 ARLRYVTSDELLHKY-p A0A1X7SBR1;S862-p ARLRYVTSDELLHKY 0.477236878212649 0.0622528326393072 0.111666666666667 0.212666666666667 5.91230609111069 16.0489385248335 0.111666666666667 0.212666666666667 0.256312266440191 0.0248374009119413 1.26892586514828 3.07541132083387 A0A1X7SBR1 NotFound A0A1X7SBR1.S862.p_NotFound A0A1X7SBR1_S862s _1_1_862_862 A0A1X7SBR1 A0A1X7SBR1|Q7Z3G6 Prickle-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17127.17127.2 11.3 11.3 1.115 3 1 1 0 871.9586 1662.9467 S862s TMT10 859 (R) YVTsDELLHK (Y) Y(0.0)VT(0.0)S(0.99)DELLHK K:TMT10,s:Phosphorylated S PRICKLE2 104335.7 2 3 3599.1 47.43 HUMAN 1 5.9123 16.0489 ARMAPALSGANLTSP-p Q9UQ35;S2376-p ARMAPALSGANLTSP 0.87289946291738 0.103909981133645 0.035 -0.180333333333333 1.15582079011424 12.990966097486 0.035 -0.180333333333333 0.766333694075715 0.050223085475307 0.312520323445083 -2.50806425541708 Q9UQ35 SRRM2 Q9UQ35.S2376.p_SRRM2 Q9UQ35_S2376s_1_1_2376_2376 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20815.20815.3 8.15 8.15 1.193 5 1 1 0 876.1177 2530.3649 M2371m S2376s TMT10 2371 (R) mAPALsGANLTSPRVPLSAYER (V) M(1.0)APALS(0.99)GANLT(0.0)S(0.0)PRVPLS(0.0)AY(0.0)ER m:Oxidized methionine,s:Phosphorylated S SRRM2 300351.7 9 152 2.1 3310.34 HUMAN 1 1.1558 -12.991 ARMNLASSFVNGFVN-p Q13200;S375-p ARMNLASSFVNGFVN 0.0635370415880919 0.00133038413689346 -0.658 -0.963666666666667 25.922764276483 46.7894696822892 -0.658 -0.963666666666667 0.00255695786980939 2.09436818388274e-05 -5.28134553338928 -13.6513219958061 Q13200 PSMD2 Q13200.S375.p_PSMD2 Q13200_S375s _1_1_375_375 Q13200 Q13200|Q13200-3|Q13200-2 26S proteasome non-ATPase regulatory subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.37063.37063.3 17.97 17.97 1.123 2 1 1 0 885.7726 2575.3379 S375s TMT10 370 (R) MNLASsFVNGFVNAAFGQDK (L) MNLAS(0.0)S(0.99)FVNGFVNAAFGQDK K:TMT10,s:Phosphorylated S PSMD2 100939.6 1 8 539.1 277.07 HUMAN 1 -25.9228 -46.7895 ARMWNDLSEKKKAKY-p P17480;S449-p ARMWNDLSEKKKAKY 0.10032994110503 0.0240162126303885 0.773333333333333 -0.805 21.1218762961105 22.0755938828017 0.773333333333333 -0.805 0.00772346833573175 0.00620069845432312 4.12396139107314 -4.33463307400714 P17480 UBTF P17480.S449.p_UBTF P17480_S449s _1_1_449_449 P17480 P17480|E9PKP7|P17480-2 Nucleolar transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15421.15421.4 7.57 7.57 99 1 1 1 0 569.573 2195.3028 S449s TMT10 444 (R) MWNDLsEKKK (A) MWNDLS(1.0)EKKK K:TMT10,s:Phosphorylated S UBTF 89746.7 1 6 1312.1 155.17 HUMAN 1 21.1219 -22.0756 ARNEALESDAEKLSS-p Q4ZG55;S1089-p ARNEALESDAEKLSS 0.275294038676077 0.00546361891682738 -0.635333333333333 0.622666666666667 10.6030846074808 32.8196403354638 -0.635333333333333 0.622666666666667 0.087034520149819 0.000522439453459317 -2.08670990951122 7.32497153245057 Q4ZG55 GREB1 Q4ZG55.S1089.p_GREB1 Q4ZG55_S1089s _1_1_1089_1089 Q4ZG55 Q4ZG55|Q4ZG55-4 Protein GREB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6787.6787.2 10.04 10.04 99 1 1 1 0 707.8189 1334.6637 S1089s Hydrogen 1084 (R) NEALEsDAEK (L) NEALES(1.0)DAEK K:TMT10-Lys-Only,s:Phosphorylated S GREB1 219316 1 3 1072.1 180.69 HUMAN 1 -10.6031 32.8196 ARNLSNLTLAHEIAV-p Q8N4U5;T76-p ARNLSNLTLAHEIAV 0.0511487796737011 0.378510739481653 -0.606666666666667 -0.18 28.3424379698712 5.60488901197869 -0.606666666666667 -0.18 0.00146472536704642 0.275112991179286 -5.94323568638426 -1.21357221516375 Q8N4U5 TCP11L2 Q8N4U5.T76.p_TCP11L2 Q8N4U5_S73sT76t_2_2_73_76 Q8N4U5 Q8N4U5|G3V1Z2 T-complex protein 11-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9992.9992.5 7.75 2.33 0 2 2 2 0 578.4946 2726.5241 S73s N74n T76t N86n TMT10 71 (R) NLsnLtLAHEIAVNEnFQLK (Q) N(0.25)LS(1.0)N(0.25)LT(1.0)LAHEIAVN(0.25)EN(0.25)FQLK K:TMT10,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T TCP11L2 58546.7 1 4 3493.1 49.81 HUMAN 1 -28.3424 -5.6049 ARNNSRVSPVPLSGA-p Q96JM2-3;S2232-p ARNNSRVSPVPLSGA 0.878629426218163 0.0039653071091094 -0.0236666666666667 0.620666666666667 1.10383197506659 35.4141071811022 -0.0236666666666667 0.620666666666667 0.775562501048132 0.000287467850683282 -0.299724556631534 8.24791690673301 Q96JM2 ZNF462 Q96JM2.3.S2232.p_ZNF462 Q96JM2-3_S2232s _1_1_2232_2232 Q96JM2-3 Q96JM2-3|Q96JM2-2 Isoform 3 of Zinc finger protein 462 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12173.12173.3 20.1 14.51 1.186 4 1 1 0 841.1071 2441.3513 S2232s TMT10 2227 (R) NNSRVsPVPLSGAAAGTEQK (T) NNS(0.0)RVS(0.99)PVPLS(0.0)GAAAGT(0.0)EQK K:TMT10,s:Phosphorylated S ZNF462 296246.7 4 10 736.1 235.26 HUMAN 1 -1.1038 35.4141 ARNSGTQSDGEEKQP-p Q6P1M3;S965-p ARNSGTQSDGEEKQP 0.195560930686114 0.123005487848705 0.22 0.212666666666667 13.8215671412971 12.0048260281756 0.22 0.212666666666667 0.0414804334468655 0.0630256592614448 2.66021600752865 2.33202647830443 Q6P1M3 LLGL2 Q6P1M3.S965.p_LLGL2 Q6P1M3_S965s _1_1_965_965 Q6P1M3 Q6P1M3|J3QRV5|Q6P1M3-2 Lethal(2) giant larvae protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11644.11644.4 19.93 19.93 2.768 3 1 1 0 650.8163 2520.2764 S965s TMT10 960 (R) NSGTQsDGEEKQPGLVMER (A) NS(0.0)GT(0.0)QS(0.99)DGEEKQPGLVMER K:TMT10,s:Phosphorylated S LLGL2 114415.8 2 12 881.1 207.2 HUMAN 1 13.8216 12.0048 ARPDGEGSPGKARPG-p P11274;S122-p ARPDGEGSPGKARPG 0.211305912815287 0.00667565213390983 -0.232333333333333 -0.488 13.0359928010401 31.2534548703874 -0.232333333333333 -0.488 0.0497050734497677 0.000749297895730577 -2.51755466020029 -6.81134809196299 P11274 BCR P11274.S122.p_BCR P11274_S122s _1_1_122_122 P11274 P11274|P11274-2 Breakpoint cluster region protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8488.8488.4 19.28 9.49 16.021 3 1 1 0 962.4647 3766.8673 S122s TMT10 92 (R) ASASRPQPAPADGADPPPAEEPEARPDGEGsPGK (A) AS(0.0)AS(0.0)RPQPAPADGADPPPAEEPEARPDGEGS(0.99)PGK K:TMT10,s:Phosphorylated S BCR 143843.8 2 1 642.1 254.93 HUMAN 1 -13.036 -31.2535 ARPLELDSGGEEDEK-p Q9UPS6;S1031-p ARPLELDSGGEEDEK 0.172336570675609 0.130025143919627 -0.536333333333333 0.259666666666667 15.2054320030154 11.6759864627831 -0.536333333333333 0.259666666666667 0.0301617683198075 0.0679831609527157 -2.91706965763285 2.2738932428961 Q9UPS6 SETD1B Q9UPS6.S1031.p_SETD1B Q9UPS6_S1031s _1_1_1031_1031 Q9UPS6 Q9UPS6|Q9UPS6-2|A0A0A0MQV9 Histone-lysine N-methyltransferase SETD1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7498.7498.4 12.49 8.51 99 1 1 1 0 648.8349 2512.352 S1031s TMT10 1021 (R) RRPARPLELDsGGEEDEK (E) RRPARPLELDS(1.0)GGEEDEK K:TMT10,s:Phosphorylated S SETD1B 213997.2 1 21 570.1 269.37 HUMAN 1 -15.2054 11.676 ARPPASPSPQRQAGP-p P17600;S553-p ARPPASPSPQRQAGP 0.379049827565882 0.0273588124414629 0.184 0.341 7.78470822034972 21.2001641092216 0.184 0.341 0.166544071624007 0.00758548910786714 1.59778962345304 4.13721310310305 P17600 SYN1 P17600.S553.p_SYN1 P17600_S553s _1_1_553_553 P17600 P17600|P17600-2 Synapsin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6431.6431.4 7.94 7.94 1.919 3 1 1 0 679.6068 2635.4378 S553s TMT10 532 (R) QSRPVAGGPGAPPAARPPASPsPQR (Q) QS(0.0)RPVAGGPGAPPAARPPAS(0.0)PS(0.99)PQR s:Phosphorylated S SYN1 74281.2 4 4 2174.1 94.5 HUMAN 1 7.7847 21.2002 ARPPRRESWISDIRA-p P57737-3;S21-p ARPPRRESWISDIRA 0.743065177288724 0.756318172808897 0.0476666666666667 -0.0456666666666667 2.45086880197658 1.67698064632234 0.0476666666666667 -0.0456666666666667 0.568739143738453 0.679676000817151 0.606486896039027 -0.435968471854102 P57737 CORO7 P57737.3.S21.p_CORO7 P57737-3_S21s _1_1_21_21 P57737-3 P57737-3|P57737-4|P57737-2|I3L167|I3L1G9|I3L359 Isoform 3 of Coronin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7858.7858.5 8.63 4.13 1.211 3 1 1 0 483.851 2335.2581 S21s TMT10 11 (R) HTEARPPRREsWISDIR (A) HT(0.0)EARPPRRES(0.99)WIS(0.0)DIR s:Phosphorylated S CORO7 115247.5 2 2 3419.1 51.62 HUMAN 1 2.4509 -1.677 ARPVSPDSPEIISEL-p Q9Y4B4;S1172-p ARPVSPDSPEIISEL 0.841909351411446 0.443038615540025 -0.0503333333333333 0.0983333333333333 1.44576501571877 4.70871105279949 -0.0503333333333334 0.0983333333333333 0.716842091735229 0.338165185718074 -0.382236602872148 1.05019505087494 Q9Y4B4 RAD54L2 Q9Y4B4.S1172.p_RAD54L2 Q9Y4B4_S1169sS1172s_2_2_1169_1172 Q9Y4B4 Q9Y4B4 Helicase ARIP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34395.34395.4 24.31 24.23 4.294 4 2 2 0 938.7008 3591.8492 S1169s S1172s TMT10 1158 (K) APDPEGLARPVsPDsPEIISELQQYADVAAAR (E) APDPEGLARPVS(0.99)PDS(0.99)PEIIS(0.0)ELQQY(0.0)ADVAAAR s:Phosphorylated S RAD54L2 164135.1 2 7 1338.1 152.26 HUMAN 1 -1.4458 4.7087 ARQAPSVSPGA____-p A0A1B0GUN3;S487-p ARQAPSVSPGA____ 0.924259199426179 0.0510886043789634 0.0156666666666667 -0.282333333333333 0.674672913159104 17.2492892192272 0.0156666666666667 -0.282333333333333 0.856116187278988 0.0188395739898454 0.190157092962347 -3.30932881046969 A0A1B0GUN3 NotFound A0A1B0GUN3.S487.p_NotFound A0A1B0GUN3_S487s _1_1_487_487 A0A1B0GUN3 A0A1B0GUN3 Fibrosin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9019.9019.2 8.92 8.92 3.314 2 1 1 0 561.7741 1042.573 S487s TMT10 482 (R) QAPSVsPGA (-) QAPS(0.0)VS(0.99)PGA s:Phosphorylated S FBRSL1 56738.2 1 1 716.2 237.81 HUMAN 1 0.6747 -17.2493 ARQGVVMTPPRNRTL-p O75385;T654-p ARQGVVMTPPRNRTL 0.807399255272832 0.0308186019577026 -0.0536666666666667 -0.306666666666667 1.78511508316308 20.4268767242676 -0.0536666666666667 -0.306666666666667 0.662961779694866 0.00906384202568081 -0.460670253014863 -3.96735355390312 O75385 ULK1 O75385.T654.p_ULK1 O75385_T654t _1_1_654_654 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7951.7951.3 11.27 11.27 99 1 1 1 0 521.9396 1483.8365 T654t TMT10 649 (R) QGVVMtPPRNR (T) QGVVMT(1.0)PPRNR t:Phosphorylated T ULK1 113656.3 1 16 351.1 351.01 HUMAN 1 -1.7851 -20.4269 ARQHKRRSDDDDRSS-p Q09161;S674-p ARQHKRRSDDDDRSS 0.238905427298457 0.0888522098155257 0.178666666666667 0.216 11.8898291087374 13.9136423193148 0.178666666666667 0.216 0.0647168080772702 0.0406102598200937 2.31280847867815 2.67548375694581 Q09161 NCBP1 Q09161.S674.p_NCBP1 Q09161_S674s _1_1_674_674 Q09161 Q09161 Nuclear cap-binding protein subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7687.7687.5 14.15 14.15 11.667 3 1 1 0 663.7293 3234.6463 S674s TMT10 672 (K) RRsDDDDRSSDRKDGVLEEQIER (L) RRS(0.99)DDDDRS(0.0)S(0.0)DRKDGVLEEQIER K:TMT10,s:Phosphorylated S NCBP1 92921.8 3 3 1603.1 128.33 HUMAN 1 11.8898 13.9136 ARQLGPRSPRVGRGA-p Q9NXG0-2;S22-p ARQLGPRSPRVGRGA 0.981829251201903 0.00567569454891715 0.00366666666666667 -0.612666666666667 0.157867422381162 32.5472577113315 0.00366666666666667 -0.612666666666667 0.964302422441682 0.000556255385688122 0.0468642432032727 -7.23339607270974 Q9NXG0 CNTLN Q9NXG0.2.S22.p_CNTLN Q9NXG0-2_S22s _1_1_22_22 Q9NXG0-2 Q9NXG0-2|Q9NXG0-3 Isoform 2 of Centlein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4364.4364.3 8.76 4.22 99 1 1 1 0 407.2218 1139.6847 S22s TMT10 17 (R) QLGPRsPR (V) QLGPRS(1.0)PR s:Phosphorylated S CNTLN 162757.8 3 1 3175.1 58.65 HUMAN 1 0.1579 -32.5473 ARQNVDHSQEAAKAK-p O00391;S426-p ARQNVDHSQEAAKAK 0.151580878479368 0.00938067758859274 0.446666666666667 0.578333333333333 16.4967253854853 28.6232911946611 0.446666666666667 0.578333333333333 0.0224040978844338 0.00137300108531694 3.16415734194377 6.01498646355736 O00391 QSOX1 O00391.S426.p_QSOX1 O00391_S426s_1_1_426_426 O00391 O00391 Sulfhydryl oxidase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4891.4891.2 8.54 7.17 99 1 1 1 0 759.8434 1455.7389 Q421q S426s Hydrogen 421 (R) qNVDHsQEAAK (A) Q(1.0)NVDHS(1.0)QEAAK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S QSOX1 83375 1 1 6949.1 8.54 HUMAN 1 16.4967 28.6233 ARQPGQGSPTPDNDP-p P61129;S1158-p ARQPGQGSPTPDNDP 0.313268519533153 0.0115480527803837 0.191 0.67 9.42617010239815 27.1141579034026 0.191 0.67 0.114125577917475 0.00194349849947445 1.88216445468433 5.59217630371041 P61129 ZC3H6 P61129.S1158.p_ZC3H6 P61129_S1158s _1_1_1158_1158 P61129 P61129 Zinc finger CCCH domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6980.6980.3 13.06 8.94 2.17 3 1 1 0 807.3562 2340.0901 S1158s Hydrogen 1153 (R) QPGQGsPTPDNDPGRETDDK (S) QPGQGS(0.99)PT(0.0)PDNDPGRET(0.0)DDK K:TMT10-Lys-Only,s:Phosphorylated S ZC3H6 132352.1 2 5 2209.1 93.4 HUMAN 1 9.4262 27.1142 ARQQSVESLAEEVKD-p Q8WXH0;S2784-p ARQQSVESLAEEVKD 0.17368064594083 0.0316625568645999 -0.337 0.497333333333333 15.1475017781909 20.2503575680519 -0.337 0.497333333333333 0.0305667892188119 0.00943983152039714 -2.9061613092204 3.92915142884044 Q8WXH0 SYNE2 Q8WXH0.S2784.p_SYNE2 Q8WXH0_S2781sS2784s_2_2_2781_2784 Q8WXH0 Q8WXH0-2|A0A0A0MRE3|G3V5X4 Nesprin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22534.22534.3 8.5 8.5 99 2 2 2 0 655.6514 1805.0057 S2781s S2784s TMT10 2779 (R) QQsVEsLAEEVK (D) QQS(1.0)VES(1.0)LAEEVK K:TMT10,s:Phosphorylated S SYNE2 802304.8 1 17 188.1 472.65 HUMAN 1 -15.1475 20.2504 ARQRLKGSGASSGDT-p Q9H6U8-3;S13-p ARQRLKGSGASSGDT 0.125743941781331 0.537526428823248 -0.345666666666667 -0.0759999999999999 18.7070528364862 3.62668483861029 -0.345666666666667 -0.0759999999999999 0.0134677397760914 0.433841922701655 -3.60679964492287 -0.844928163829988 Q9H6U8 ALG9 Q9H6U8.3.S13.p_ALG9 Q9H6U8-3_S13s _1_1_13_13 Q9H6U8-3 A0A087WZ62|Q9H6U8-3|A0A087WZY8|A0A087WVC0|A0A087WTZ3|A0A087WX16 Isoform 3 of Alpha-1,2-mannosyltransferase ALG9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9993.9993.4 10.21 10.21 1.254 4 1 1 0 575.8091 2220.2439 S13s TMT10 10 (R) LKGsGASSGDTAPAADK (L) LKGS(0.99)GAS(0.0)S(0.0)GDT(0.0)APAADK K:TMT10,s:Phosphorylated S ALG9 71583.9 2 1 5001.1 23.99 HUMAN 1 -18.7071 -3.6267 ARRCSVTSMESTVSS-p Q9Y6D5;S617-p ARRCSVTSMESTVSS 0.964239101933869 0.0190595824058964 0.00799999999999999 0.347333333333333 0.30537271448215 23.6518311311907 0.008 0.347333333333333 0.932100473411523 0.00431337172263785 0.0892408220211015 4.70476886545828 Q9Y6D5 ARFGEF2 Q9Y6D5.S617.p_ARFGEF2 Q9Y6D5_S617s _1_1_617_617 Q9Y6D5 Q9Y6D5 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25645.25645.3 18.09 15.31 1.13 10 1 1 0 1243.5834 3648.7661 S617s TMT10 613 (R) CSVTsMESTVSSGTQTTVQDDPEQFEVIK (Q) CS(0.0)VT(0.0)S(0.99)MES(0.0)T(0.0)VS(0.0)S(0.0)GT(0.0)QT(0.0)T(0.0)VQDDPEQFEVIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARFGEF2 204545.1 12 5 205.1 448.88 HUMAN 1 0.3054 23.6518 ARRDLVDSPASLASS-p K7EMK7;S272-p ARRDLVDSPASLASS 0.135767236369861 0.431167270134821 -0.264666666666667 0.0853333333333334 17.7861480172799 4.8678279002564 -0.264666666666667 0.0853333333333334 0.0166488867169599 0.325999707179218 -3.41911440425849 1.07956696852866 K7EMK7 TLE2 K7EMK7.S272.p_TLE2 K7EMK7_S272s _1_1_272_272 K7EMK7 K7EMK7|Q04725|Q04725-3 Transducin-like enhancer protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.29850.29850.3 12.01 12.01 1.804 5 1 1 0 731.0463 2111.1546 S272s TMT10 268 (R) DLVDsPASLASSLGSPLPR (A) DLVDS(0.99)PAS(0.0)LAS(0.0)S(0.0)LGS(0.0)PLPR s:Phosphorylated S TLE2 81165.8 1 2 4401.1 31.98 HUMAN 1 -17.7861 4.8678 ARRESAASGLGGLLE-p Q9C0C2;S1476-p ARRESAASGLGGLLE 0.225596004363036 0.509865520176487 -0.255333333333333 0.0913333333333334 12.4149678174382 3.92178478078247 -0.255333333333333 0.0913333333333334 0.0573460116046706 0.405341921508653 -2.40616205135241 0.901998287576843 Q9C0C2 TNKS1BP1 Q9C0C2.S1476.p_TNKS1BP1 Q9C0C2_S1473sS1476s_2_2_1473_1476 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27460.27460.4 18.35 18.35 99 2 2 2 0 850.6434 3239.6341 S1473s S1476s TMT10 1471 (R) REsAAsGLGGLLEEEGAGAGAAQEEVLEPGR (D) RES(1.0)AAS(1.0)GLGGLLEEEGAGAGAAQEEVLEPGR s:Phosphorylated S TNKS1BP1 182819.3 1 86 4.1 2105.7 HUMAN 1 -12.415 3.9218 ARRGRRWSVELKRSV-p Q00G26;S140-p ARRGRRWSVELKRSV 0.0683636000573323 0.00245347195567913 -0.379666666666667 0.857666666666667 25.1476612081701 40.0150478159078 -0.379666666666667 0.857666666666667 0.00305656671292337 9.96541108137179e-05 -5.08127229933681 10.1381324888411 Q00G26 PLIN5 Q00G26.S140.p_PLIN5 Q00G26_S140s _1_1_140_140 Q00G26 Q00G26 Perilipin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13999.13999.2 10.24 10.24 99 1 1 1 0 613.8285 1146.6833 S140s Hydrogen 138 (R) RWsVELK (R) RWS(1.0)VELK K:TMT10-Lys-Only,s:Phosphorylated S PLIN5 51475.1 5 1 128.2 537.52 HUMAN 1 -25.1477 40.015 ARRKGAASPVLQEDH-p Q8N9B5;S713-p ARRKGAASPVLQEDH 0.311452448110121 0.0201544544723462 -0.192333333333333 0.333666666666667 9.47632738220597 23.2241522733495 -0.192333333333333 0.333666666666667 0.11281510755514 0.00475975690603407 -1.89085573564319 4.60239792918994 Q8N9B5 JMY Q8N9B5.S713.p_JMY Q8N9B5_S713s _1_1_713_713 Q8N9B5 Q8N9B5|Q8N9B5-2 Junction-mediating and -regulatory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20292.20292.5 16.7 16.7 6.755 4 1 1 0 904.2637 4437.3287 S713s TMT10 708 (R) RKGAAsPVLQEDHCDSLPSVLQVEEKTEEVGEGR (V) RKGAAS(0.99)PVLQEDHCDS(0.0)LPS(0.0)VLQVEEKT(0.0)EEVGEGR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S JMY 112127.7 5 9 1120.1 175.11 HUMAN 1 -9.4763 23.2242 ARRKPKGSPRVPDAK-p F5GWX5;S270-p ARRKPKGSPRVPDAK 0.446888783137279 0.00356137322963082 -0.145 -0.671666666666667 6.45264198849974 36.5209256048553 -0.145 -0.671666666666667 0.226326705208215 0.000222796025707373 -1.36481812822186 -8.671343212237 F5GWX5 CHD4 F5GWX5.S270.p_CHD4 F5GWX5_S270s _1_1_270_270 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7624.7624.3 14.12 10.03 99 1 1 1 0 488.9377 1384.8313 S270s TMT10 269 (K) GsPRVPDAK (K) GS(1.0)PRVPDAK K:TMT10,s:Phosphorylated S CHD4 218583 5 3 49.1 753.68 HUMAN 1 -6.4526 -36.5209 ARRKTVFSPTLPAAR-p C9J6P4;S378-p ARRKTVFSPTLPAAR 0.528459155134352 0.0511772686384942 -0.087 -0.232333333333333 5.12519912250051 17.2329453781449 -0.087 -0.232333333333333 0.307241649281673 0.0189106066936281 -1.12695277561051 -3.30609464001304 C9J6P4 ZC3HAV1 C9J6P4.S378.p_ZC3HAV1 C9J6P4_S378s _1_1_378_378 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2|Q7Z2W4-3 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20498.20498.3 13.91 7.79 1.119 3 1 1 0 490.2631 1388.8099 S378s TMT10 375 (K) TVFsPTLPAAR (S) T(0.0)VFS(0.99)PT(0.0)LPAAR s:Phosphorylated S ZC3HAV1 115909.2 4 10 361.1 343.37 HUMAN 1 -5.1252 -17.2329 ARRLGYISVVDTLKI-p Q12955;S810-p ARRLGYISVVDTLKI 0.165204761268616 0.0481189789148047 -0.255 0.275 15.6573069063755 17.6200609467171 -0.255 0.275 0.0271812427619884 0.0172979208400717 -3.00266274268026 3.38308073006507 Q12955 ANK3 Q12955.S810.p_ANK3 Q12955_S810s _1_1_810_810 Q12955 Q12955|Q01484|I6L894|Q01484-2|Q12955-4|Q01484-5|Q12955-5|Q12955-7|E9PCH6 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31576.31576.3 14.65 11.73 4.082 3 1 1 0 582.6655 1666.0191 S810s TMT10 806 (R) LGYIsVVDTLK (I) LGY(0.0)IS(0.99)VVDT(0.0)LK K:TMT10,s:Phosphorylated S ANK3 482683.6 2 6 135.1 530.51 HUMAN 1 -15.6573 17.6201 ARRLHPPSPVPQGVC-p Q96F44;S85-p ARRLHPPSPVPQGVC 0.866513141351936 0.104097153399283 0.0273333333333333 -0.186333333333333 1.2112648422519 12.9802051561533 0.0273333333333333 -0.186333333333333 0.756612506579936 0.0503476824509584 0.326063538543505 -2.50612809720362 Q96F44 TRIM11 Q96F44.S85.p_TRIM11 Q96F44_S85s _1_1_85_85 Q96F44 Q96F44|Q96F44-3|Q96F44-2 E3 ubiquitin-protein ligase TRIM11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16410.16410.5 28.44 28.44 99 1 1 1 0 715.3571 3492.7942 S85s TMT10 80 (R) RLHPPsPVPQGVCPAHREPLAAFCGDELR (L) RLHPPS(1.0)PVPQGVCPAHREPLAAFCGDELR C:Carbamidomethylation,s:Phosphorylated S TRIM11 53800.2 7 1 3418.1 51.63 HUMAN 1 1.2113 -12.9802 ARRLPALSHSEGEED-p P55201-2;S460-p ARRLPALSHSEGEED 0.147571881565505 0.211983976313256 0.417333333333333 0.129333333333333 16.8648229072622 8.86259401023019 0.417333333333333 0.129333333333333 0.0205834282210209 0.129939322781553 3.23605770622864 1.78394645007562 P55201 BRPF1 P55201.2.S460.p_BRPF1 P55201-2_S460sS462s_2_2_460_462 P55201-2 P55201-2|P55201-3|P55201-4 Isoform 2 of Peregrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15958.15958.4 11.11 11.11 11.111 4 2 2 0 1006.2021 3861.8506 S460s S462s TMT10 455 (R) RLPALsHsEGEEDEDEEEDEGKGWSSEK (V) RLPALS(0.99)HS(0.99)EGEEDEDEEEDEGKGWS(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S BRPF1 139837.6 4 14 723.1 237.03 HUMAN 1 16.8648 8.8626 ARRNDDISELEDLSE-p Q9H4L7-2;S146-p ARRNDDISELEDLSE 0.564703045643943 0.0224266570187982 0.085 -0.314666666666667 4.57128375327979 22.5276189803172 0.085 -0.314666666666667 0.349037126558175 0.00558776459992279 1.02487291279821 -4.43879679151571 Q9H4L7 SMARCAD1 Q9H4L7.2.S146.p_SMARCAD1 Q9H4L7-2_S146s _1_1_146_146 Q9H4L7-2 Q9H4L7-2|D6RAY8 Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27858.27858.5 22.18 22.18 3.997 2 1 1 0 643.7337 3134.6672 S146s TMT10 141 (R) RNDDIsELEDLSELEDLKDAK (L) RNDDIS(0.99)ELEDLS(0.0)ELEDLKDAK K:TMT10,s:Phosphorylated S SMARCAD1 118399.2 6 5 250.1 406.83 HUMAN 1 4.5713 -22.5276 ARRNRKRSIKYDSLL-p O96028-3;S172-p ARRNRKRSIKYDSLL 0.138406999744561 0.0129894069478491 -0.272 -0.375666666666667 17.5906012032287 26.2686374460258 -0.272 -0.375666666666667 0.0174156576799391 0.00236121892497419 -3.37987961430135 -5.3652836784934 O96028 WHSC1 O96028.3.S172.p_WHSC1 O96028-3_S172s _1_1_172_172 O96028-3 O96028|O96028-3|O96028-5|O96028-6|O96028-7 Isoform 3 of Histone-lysine N-methyltransferase NSD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.36054.36054.4 18.53 15.19 1.118 4 1 1 0 733.4161 2850.6795 S172s TMT10 172 (R) sIKYDSLLEQGLVEAALVSK (I) S(0.99)IKY(0.0)DS(0.0)LLEQGLVEAALVS(0.0)K K:TMT10,s:Phosphorylated S NSD2 72093.4 6 6 410.1 322.95 HUMAN 1 -17.5906 -26.2686 ARRNTIDSTSSFSQF-p Q8TDN4;S418-p ARRNTIDSTSSFSQF 0.71081672410669 0.0923029493480819 0.0783333333333333 -0.278333333333333 2.7883191830444 13.6867391524858 0.0783333333333333 -0.278333333333333 0.526220886259243 0.0427884037116936 0.677079522849706 -2.63404375225251 Q8TDN4 CABLES1 Q8TDN4.S418.p_CABLES1 Q8TDN4_S418s _1_1_418_418 Q8TDN4 Q8TDN4|Q8TDN4-2|Q8TDN4-4 CDK5 and ABL1 enzyme substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13167.13167.3 9.45 9.45 1.131 6 1 1 0 652.3118 1874.9558 S418s TMT10 413 (R) RNTIDsTSSFSQFR (N) RNT(0.0)IDS(0.99)T(0.0)S(0.0)S(0.0)FS(0.0)QFR s:Phosphorylated S CABLES1 68282.3 1 8 1243.1 162.91 HUMAN 1 2.7883 -13.6867 ARRPDPDSDEDEDYE-p Q96I25;S155-p ARRPDPDSDEDEDYE 0.15636344485557 0.319334222230627 0.234666666666667 0.0983333333333334 16.1735940146141 6.55624100842851 0.234666666666667 0.0983333333333334 0.0241346274079736 0.22099166762966 3.10159348965151 1.38273128310176 Q96I25 RBM17 Q96I25.S155.p_RBM17 Q96I25_S155s _1_1_155_155 Q96I25 Q96I25 Splicing factor 45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4589.4589.4 19.46 14.25 10.968 2 1 1 0 583.7451 2251.9901 S155s TMT10 150 (R) RPDPDsDEDEDYERER (R) RPDPDS(0.99)DEDEDY(0.0)ERER s:Phosphorylated S RBM17 45188.9 11 4 851.1 212.17 HUMAN 1 16.1736 6.5562 ARRPRARSVDALDDL-p Q86X29-6;S337-p ARRPRARSVDALDDL 0.953787591584108 0.568175503059761 0.00966666666666666 0.0543333333333334 0.403631821117458 3.30862044700569 0.00966666666666666 0.0543333333333334 0.911248482061936 0.466807639993583 0.116777104614807 0.782312383357359 Q86X29 LSR Q86X29.6.S337.p_LSR Q86X29-6_S337s _1_1_337_337 Q86X29-6 Q86X29|Q86X29-4|Q86X29-3|S4R3V8|Q86X29-2|Q86X29-5|Q86X29-6 Isoform 6 of Lipolysis-stimulated lipoprotein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18067.18273.3 24.43 17.1 3.442 6 1 1 0 666.6291 1917.9036 S337s Hydrogen 337 (R) sVDALDDLTPPSTAESGSR (S) S(0.99)VDALDDLT(0.0)PPS(0.0)T(0.0)AES(0.0)GS(0.0)R s:Phosphorylated S LSR 54725.6 8 9 206.1 448.79 HUMAN 1 0.4036 3.3086 ARRQQDPSPGSNLGG-p Q13951-2;S173-p ARRQQDPSPGSNLGG 0.798614246316473 0.436851484241623 0.052 0.0883333333333334 1.88240732919416 4.79125991194799 0.052 0.0883333333333334 0.648274989902578 0.33179818712761 0.482599895471386 1.06545501297243 Q13951 CBFB Q13951.2.S173.p_CBFB Q13951-2_S173s _1_1_173_173 Q13951-2 Q13951-2 Isoform 2 of Core-binding factor subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10420.10420.3 17.35 12 2.144 2 1 1 0 793.7277 2299.2043 S173s TMT10 168 (R) RQQDPsPGSNLGGGDDLK (L) RQQDPS(0.99)PGS(0.0)NLGGGDDLK K:TMT10,s:Phosphorylated S CBFB 22219.3 1 1 5669.1 17.35 HUMAN 1 1.8824 4.7913 ARRQRLRSKLEQVVD-p Q9UIW2;S1883-p ARRQRLRSKLEQVVD 0.214734983572386 0.48922464752138 -0.216 -0.0806666666666667 12.8760663501377 4.14995410481862 -0.216 -0.0806666666666666 0.0515695527609255 0.38459584633896 -2.48875854414144 -0.945522517277054 Q9UIW2 PLXNA1 Q9UIW2.S1883.p_PLXNA1 Q9UIW2_S1883s _1_1_1883_1883 Q9UIW2 Q9UIW2 Plexin-A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.33290.33290.3 16.42 16.42 9.176 4 1 1 0 772.4179 2235.2783 S1883s TMT10 1881 (R) LRsKLEQVVDTMALSS (-) LRS(0.99)KLEQVVDT(0.0)MALS(0.0)S(0.0) K:TMT10,s:Phosphorylated S PLXNA1 214258.2 1 7 3403.1 51.92 HUMAN 1 -12.8761 -4.15 ARRRLADSGDGAGPS-p Q92917;S35-p ARRRLADSGDGAGPS 0.520762642147173 0.906789239264875 -0.133666666666667 0.0123333333333334 5.23736335957935 0.594857752950892 -0.133666666666667 0.0123333333333334 0.299408181863661 0.871995461804214 -1.14738367365814 0.168902772170465 Q92917 GPKOW Q92917.S35.p_GPKOW Q92917_S35s _1_1_35_35 Q92917 Q92917 G-patch domain and KOW motifs-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7405.7405.3 10.08 11.58 1.736 2 1 1 0 580.2632 1658.8071 S35s Hydrogen 32 (R) LADsGDGAGPSPEEK (D) LADS(0.99)GDGAGPS(0.0)PEEK K:TMT10-Lys-Only,s:Phosphorylated S GPKOW 52456.1 4 3 1512.1 134.72 HUMAN 1 -5.2374 0.5949 ARRSASASHQADIKE-p Q14739;S101-p ARRSASASHQADIKE 0.668062231327386 0.875329225641014 0.0603333333333333 -0.0186666666666666 3.27721386349565 0.812775368940027 0.0603333333333333 -0.0186666666666666 0.470195657258646 0.829320618874832 0.776176467478084 -0.226210689827687 Q14739 LBR Q14739.S101.p_LBR Q14739_S101s _1_1_101_101 Q14739 Q14739 Lamin-B receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5717.5717.3 10.07 9.54 1.159 3 1 1 0 551.6192 1572.8746 S101s TMT10 97 (R) SASAsHQADIK (E) S(0.0)AS(0.0)AS(0.99)HQADIK K:TMT10,s:Phosphorylated S LBR 71101.3 1 5 1716.1 119.76 HUMAN 1 3.2772 -0.8128 ARRSVSGSPESDELQ-p Q7Z2Z1;S838-p ARRSVSGSPESDELQ 0.154592674337897 0.0214176435991247 0.247333333333333 -0.388333333333333 16.2942714174327 22.8234614830715 0.247333333333333 -0.388333333333333 0.0234732302204971 0.0052197998635201 3.12489932894558 -4.50781877658892 Q7Z2Z1 TICRR Q7Z2Z1.S838.p_TICRR Q7Z2Z1_S838s _1_1_838_838 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16408.16408.3 15.17 15.17 2.22 4 1 1 0 647.9731 1861.9341 S838s TMT10 834 (R) SVSGsPESDELQELR (T) S(0.0)VS(0.0)GS(0.99)PES(0.0)DELQELR s:Phosphorylated S TICRR 212850 3 6 238.1 417.32 HUMAN 1 16.2943 -22.8235 ARRVLVASRNSSNDA-p P29803;S25-p ARRVLVASRNSSNDA 0.179658679373764 0.266408628362195 0.958666666666667 0.586333333333333 14.7187637883782 7.5642038988172 0.958666666666667 0.586333333333333 0.0337383330564995 0.175218359591998 2.82586962431329 1.55899052119633 P29803 PDHA2 P29803.S25.p_PDHA2 P29803_S25s_1_1_25_25 P29803 P29803 Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12019.12247.3 7.15 7.15 3.941 4 1 1 0 849.7714 2465.3876 S25s N27n N30n TMT10 20 (R) RVLVAsRnSSnDATFEIK (K) RVLVAS(0.99)RN(1.0)S(0.0)S(0.0)N(1.0)DAT(0.0)FEIK K:TMT10,s:Phosphorylated S,n:Deamidated PDHA2 43674.2 3 7 1899.2 108.34 HUMAN 1 14.7188 7.5642 ARRWRKLYCANGHTF-p P41743;Y136-p ARRWRKLYCANGHTF 0.340510572231773 0.364276830645201 0.168 0.127 8.70341818068191 5.81408693392344 0.168 0.127 0.134790157857892 0.262175018068921 1.75702408300657 1.25108396120971 P41743 PRKCI P41743.Y136.p_PRKCI P41743_Y136y _1_1_136_136 P41743 P41743 Protein kinase C iota type GG20160819_MSz_CCLE_T4D7_pY_Injection_01.14582.14582.3 15.74 15.74 15.738 2 1 1 0 649.9913 1867.9889 Y136y TMT10 135 (K) LyCANGHTFQAK (R) LY(0.99)CANGHT(0.0)FQAK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y PRKCI 69231.1 2 1 226.1 15.74 HUMAN 1 8.7034 5.8141 ARRWWAASPAPARLP-p Q8NC56;S166-p ARRWWAASPAPARLP 0.862208558499521 0.0409812651064266 0.029 -0.272333333333333 1.25759196820565 18.5950449740925 0.029 -0.272333333333333 0.748584452941599 0.0138196009470795 0.337300448513904 -3.58065379354469 Q8NC56 LEMD2 Q8NC56.S166.p_LEMD2 Q8NC56_S166s _1_1_166_166 Q8NC56 Q8NC56 LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27684.27684.4 15.4 7.45 2.132 3 1 1 0 745.1521 2897.61 S166s TMT10 162 (R) WWAAsPAPARLPSSLLGPDPRPGLR (A) WWAAS(0.99)PAPARLPS(0.0)S(0.0)LLGPDPRPGLR s:Phosphorylated S LEMD2 57373.5 5 6 664.1 250.64 HUMAN 1 1.2576 -18.595 ARSAGAGSPARPPSP-p P83369;S15-p ARSAGAGSPARPPSP 0.45060350179761 0.372133810624091 0.197 0.192333333333333 6.39227624602492 5.69637101563075 0.197 0.192333333333333 0.229494549449329 0.269378480252838 1.35415622391297 1.23000102191898 P83369 LSM11 P83369.S15.p_LSM11 P83369_S15sS21s_2_2_15_21 P83369 P83369 U7 snRNA-associated Sm-like protein LSm11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5307.5307.2 7.18 7.18 7.182 3 2 2 0 848.8923 1536.8444 S15s S21s TMT10 10 (R) SAGAGsPARPPsPR (L) S(0.0)AGAGS(0.99)PARPPS(0.99)PR s:Phosphorylated S LSM11 39670.1 2 4 3741.1 44.09 HUMAN 1 6.3923 5.6964 ARSASLRSFSSDRSY-p Q12955;S916-p ARSASLRSFSSDRSY 1 0.888924914686095 -4.62592926927149e-18 -0.018 0 0.71826573366939 0 -0.018 1 0.847565804668239 0 -0.201615238999092 Q12955 ANK3 Q12955.S916.p_ANK3 Q12955_S916s _1_1_916_916 Q12955 Q12955|Q12955-4|Q12955-5|Q12955-6 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8668.8668.3 10.87 6.31 1.189 5 1 1 0 507.914 1441.7597 S916s TMT10 911 (R) SASLRsFSSDR (S) S(0.0)AS(0.0)LRS(0.99)FS(0.0)S(0.0)DR s:Phosphorylated S ANK3 482683.6 2 10 135.1 530.51 HUMAN 1 0 -0.7183 ARSFSPKSPLELGEK-p Q15742;S162-p ARSFSPKSPLELGEK 0.555993110687969 0.115480981947455 -0.092 -0.179 4.70624630298475 12.3680590520276 -0.092 -0.179 0.338357158946885 0.0579687712451704 -1.0499403861444 -2.39655414927686 Q15742 NAB2 Q15742.S162.p_NAB2 Q15742_S162s _1_1_162_162 Q15742 Q15742|Q15742-3|Q15742-2 NGFI-A-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20619.20619.3 13.02 13.02 2.598 3 1 1 0 729.4077 2106.2414 S162s TMT10 157 (R) SFSPKsPLELGEK (L) S(0.0)FS(0.0)PKS(0.99)PLELGEK K:TMT10,s:Phosphorylated S NAB2 56878.4 4 4 983.1 192.11 HUMAN 1 -4.7062 -12.3681 ARSKGKNSDEEAPKT-p Q9UNL4;S150-p ARSKGKNSDEEAPKT 0.0522770283900715 0.00204357923491695 0.614666666666667 0.945 27.8338314303779 41.9067501067555 0.614666666666667 0.945 0.00164670899181442 6.44651487813494e-05 5.79919401197218 11.0231455824081 Q9UNL4 ING4 Q9UNL4.S150.p_ING4 Q9UNL4_S150s _1_1_150_150 Q9UNL4 Q9UNL4|Q9UNL4-2|Q9UNL4-6|Q9UNL4-5|Q9UNL4-7|Q9UNL4-4|Q9UNL4-3|Q9UNL4-8 Inhibitor of growth protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5667.5667.2 12.39 3.26 99 1 1 1 0 921.4838 1761.995 S150s TMT10 147 (K) GKNsDEEAPK (T) GKNS(1.0)DEEAPK K:TMT10,s:Phosphorylated S ING4 28986.4 4 2 4257.1 34.58 HUMAN 1 27.8338 41.9068 ARSLLNHTPPSGRPR-p Q9UKI8-2;T38-p ARSLLNHTPPSGRPR 0.150807928835782 0.116933443322022 0.248666666666667 0.177333333333333 16.5569971477381 12.2915103124413 0.248666666666667 0.177333333333333 0.0220953194669936 0.0589995866176782 3.17588367746961 2.38292654612253 Q9UKI8 TLK1 Q9UKI8.2.T38.p_TLK1 Q9UKI8-2_T38t _1_1_38_38 Q9UKI8-2 Q9UKI8-2|B3KRP1|F8W7X8 Isoform 2 of Serine/threonine-protein kinase tousled-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7648.7648.4 11.48 11.48 11.484 3 1 1 0 435.9833 1660.9445 T38t TMT10 33 (R) SLLNHtPPSGRPR (E) S(0.0)LLNHT(0.99)PPS(0.0)GRPR t:Phosphorylated T TLK1 89592.2 2 11 1183.2 168.82 HUMAN 1 16.557 12.2915 ARSLPSASTSKATIS-p Q9UQN3;S192-p ARSLPSASTSKATIS 0.18878716220005 0.772909878531226 -0.301 -0.0443333333333333 14.1776906785027 1.54828214545173 -0.301 -0.0443333333333333 0.0382147420246734 0.700118873698891 -2.72560150115083 -0.406223951269544 Q9UQN3 CHMP2B Q9UQN3.S192.p_CHMP2B Q9UQN3_S192s _1_1_192_192 Q9UQN3 Q9UQN3|C9J0A7|Q9UQN3-2 Charged multivesicular body protein 2b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10836.10836.2 12.04 6.71 1.166 5 1 1 0 708.3807 1335.7884 S192s TMT10 187 (R) SLPSAsTSK (A) S(0.0)LPS(0.0)AS(0.99)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CHMP2B 23963.2 4 2 3305.1 54.38 HUMAN 1 -14.1777 -1.5483 ARSPARISPHIKDGE-p P29374;S1145-p ARSPARISPHIKDGE 0.574559995878661 0.194363672697703 -0.0923333333333333 0.131 4.42880427277361 9.35450323960634 -0.0923333333333334 0.131 0.360677933498064 0.116024492121014 -0.998258619400594 1.86904687395284 P29374 ARID4A P29374.S1145.p_ARID4A P29374_S1145s _1_1_1145_1145 P29374 P29374 AT-rich interactive domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11559.11559.4 8.08 8.08 99 1 1 1 0 473.5217 1811.0994 S1145s TMT10 1144 (R) IsPHIKDGEK (D) IS(1.0)PHIKDGEK K:TMT10,s:Phosphorylated S ARID4A 143719.1 2 10 532.1 280.77 HUMAN 1 -4.4288 9.3545 ARSPQDRSPILAEVK-p O95259;S904-p ARSPQDRSPILAEVK 0.37492275398005 0.570926176925103 -0.124333333333333 0.0653333333333334 7.88866166715073 3.28149072267346 -0.124333333333333 0.0653333333333334 0.162604976615488 0.469732844388418 -1.61584028144036 0.776913590967579 O95259 KCNH1 O95259.S904.p_KCNH1 O95259_S904s _1_1_904_904 O95259 O95259|O95259-2|A0A1W2PNI2|A0A1X7SBS6|A0A1W2PPA2 Potassium voltage-gated channel subfamily H member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14742.14742.3 13.86 13.86 2.926 2 1 1 0 660.031 1898.1111 S904s TMT10 899 (R) SPQDRsPILAEVK (H) S(0.0)PQDRS(0.99)PILAEVK K:TMT10,s:Phosphorylated S KCNH1 112504.8 2 3 2720.1 72.93 HUMAN 1 -7.8887 3.2815 ARSSLGQSASETEED-p Q13435;S307-p ARSSLGQSASETEED 0.892926925432374 0.483100410882271 -0.0216666666666667 0.0673333333333334 0.963514934595266 4.21663497995332 -0.0216666666666667 0.0673333333333334 0.801029492871264 0.378735924932383 -0.264701326358858 0.958150813891871 Q13435 SF3B2 Q13435.S307.p_SF3B2 Q13435_S307s _1_1_307_307 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13113.13113.5 25.1 25.1 1.467 8 1 1 0 665.3553 3242.7773 S307s TMT10 302 (R) SSLGQsASETEEDTVSVSKKEK (N) S(0.0)S(0.0)LGQS(0.99)AS(0.0)ET(0.0)EEDT(0.0)VS(0.0)VS(0.0)KKEK K:TMT10,s:Phosphorylated S SF3B2 100339.9 21 4 193.1 462.57 HUMAN 1 -0.9635 4.2166 ARSSLSASHPMVGKW-p Q8TEW0;S225-p ARSSLSASHPMVGKW 0.220753787202438 0.08037670191759 0.182666666666667 -0.282 12.6306548154157 14.5273247551897 0.182666666666667 -0.282 0.0545675579658891 0.0352587997620626 2.44472100091007 -2.78851193586902 Q8TEW0 PARD3 Q8TEW0.S225.p_PARD3 Q8TEW0_S225s_1_1_225_225 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11|Q8TEW0-4|Q8TEW0-6 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8722.8722.3 7.89 7.89 1.274 4 1 1 0 585.6352 1658.93 S225s M228m TMT10 220 (R) SSLSAsHPmVGK (W) S(0.0)S(0.0)LS(0.0)AS(0.99)HPM(1.0)VGK K:TMT10,s:Phosphorylated S,m:Oxidized methionine PARD3 151933.9 1 8 65.1 692.2 HUMAN 1 12.6307 -14.5273 ARSSRPASPCNKRKY-p O95644;S261-p ARSSRPASPCNKRKY 0.35440286195362 0.129109098627485 0.131666666666667 -0.162333333333333 8.37281361059824 11.7173736442854 0.131666666666667 -0.162333333333333 0.145451645546656 0.0673383755775757 1.69978012552759 -2.28119575017262 O95644 NFATC1 O95644.S261.p_NFATC1 O95644_S261s _1_1_261_261 O95644 O95644|O95644-6|O95644-4|O95644-5|O95644-2|O95644-10|O95644-3|O95644-11|O95644-8|K7ER53 Nuclear factor of activated T-cells, cytoplasmic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3687.3687.3 10.54 6.47 3.723 3 1 1 0 547.9443 1561.8521 S261s TMT10 256 (R) SSRPAsPCNK (R) S(0.0)S(0.0)RPAS(0.99)PCNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NFATC1 102439 2 1 1768.3 116.39 HUMAN 1 8.3728 -11.7174 ARSTPHRTPIITPNT-p Q9NQW6;T397-p ARSTPHRTPIITPNT 0.620377316956259 0.0692694907055307 0.184333333333333 -0.363333333333333 3.8542777814254 15.4167282002294 0.184333333333333 -0.363333333333333 0.411691804711153 0.0287294412739323 0.889170168539553 -2.95498612654363 Q9NQW6 ANLN Q9NQW6.T397.p_ANLN Q9NQW6_T397t _1_1_397_397 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7661.7661.3 15.05 10.42 3.187 5 1 1 0 701.0565 2021.1908 T397t TMT10 392 (R) STPHRtPIITPNTK (A) S(0.0)T(0.0)PHRT(0.99)PIIT(0.0)PNT(0.0)K K:TMT10,t:Phosphorylated T ANLN 125566 3 27 68.1 675.08 HUMAN 1 3.8543 -15.4167 ARSWTGKSPKQFLID-p A0A087WYN9;S378-p ARSWTGKSPKQFLID 0.527953388125622 0.645100209529137 -0.126666666666667 0.055 5.13308915740668 2.59545361142461 -0.126666666666667 0.055 0.306683975459124 0.550116459006265 -1.1283923866653 0.636891787677867 A0A087WYN9 NotFound A0A087WYN9.S378.p_NotFound A0A087WYN9_S378s _1_1_378_378 A0A087WYN9 A0A087WYN9|Q7Z478 ATP-dependent RNA helicase DHX29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10551.10551.3 7.68 2.67 1.351 3 1 1 0 553.3143 1577.9618 S378s TMT10 373 (R) SWTGKsPK (Q) S(0.0)WT(0.0)GKS(0.99)PK K:TMT10,s:Phosphorylated S DHX29 156372.9 1 6 2368.1 86.39 HUMAN 1 -5.1331 2.5955 ARTASTPTPPQTGGG-p Q04637-9;T214-p ARTASTPTPPQTGGG 0.875267863646254 0.0844368193399363 -0.0233333333333333 -0.194666666666667 1.13298892244339 14.2114213942157 -0.0233333333333333 -0.194666666666667 0.770373096687049 0.0379190860001353 -0.306912489692279 -2.73015121603664 Q04637 EIF4G1 Q04637.9.T214.p_EIF4G1 Q04637-9_T214t _1_1_214_214 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1|Q04637-4|E7EX73|Q04637-5|Q04637-7|Q04637-6 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19245.19495.4 26.86 22.87 1.167 6 1 1 0 942.2214 3685.8983 T214t TMT10 209 (R) TASTPtPPQTGGGLEPQANGETPQVAVIVRPDDR (S) T(0.0)AS(0.0)T(0.0)PT(0.99)PPQT(0.0)GGGLEPQANGET(0.0)PQVAVIVRPDDR t:Phosphorylated T EIF4G1 176975.4 14 5 107.1 585.61 HUMAN 1 -1.133 -14.2114 ARTQAPPTPDKVQMT-p A0A0G2JNW7;T973-p ARTQAPPTPDKVQMT 0.749319883148707 0.191592734526852 0.0496666666666667 -0.139666666666667 2.38505126913752 9.43817894389971 0.0496666666666667 -0.139666666666667 0.577424056093164 0.113810440851282 0.592481307841247 -1.88353123426453 A0A0G2JNW7 NotFound A0A0G2JNW7.T973.p_NotFound A0A0G2JNW7_T973t _1_1_973_973 A0A0G2JNW7 Q9Y666|A0A0G2JNW7 Solute carrier family 12 member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17019.17019.4 15.34 16.19 7.857 4 1 1 0 599.5622 2315.2582 T973t TMT10 968 (R) TQAPPtPDKVQMTWTR (E) T(0.0)QAPPT(0.99)PDKVQMT(0.0)WT(0.0)R K:TMT10,t:Phosphorylated T SLC12A7 120389 8 7 1247.2 162.14 HUMAN 1 2.3851 -9.4382 ARTRRSNSSEALLVD-p Q96HB5-4;S395-p ARTRRSNSSEALLVD 0.164299000896458 0.137223401455149 0.345333333333333 0.159 15.709835137143 11.3657281702434 0.345333333333333 0.159 0.0268544638615716 0.0730175376006297 3.01267176593234 2.2192712020945 Q96HB5 CCDC120 Q96HB5.4.S395.p_CCDC120 Q96HB5-4_S395s _1_1_395_395 Q96HB5-4 Q96HB5-4|Q96HB5-3|Q96HB5-5|Q96HB5-2 Isoform 4 of Coiled-coil domain-containing protein 120 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9521.9521.3 14.34 14.34 1.136 3 1 1 0 552.6158 1575.8652 S395s TMT10 392 (R) RSNsSEALLVDR (A) RS(0.0)NS(0.99)S(0.0)EALLVDR s:Phosphorylated S CCDC120 75538.7 3 6 1058.1 182.62 HUMAN 1 15.7098 11.3657 ARTVHRDSEEEDDYL-p Q96SD1;S385-p ARTVHRDSEEEDDYL 0.287132448838618 0.334019447074638 0.150666666666667 0.106 10.2209618096574 6.31163774071492 0.150666666666667 0.106 0.0950394291410976 0.233795542067849 2.020126573165 1.33956071828111 Q96SD1 DCLRE1C Q96SD1.S385.p_DCLRE1C Q96SD1_S385s _1_1_385_385 Q96SD1 Q96SD1|Q96SD1-3|Q96SD1-2|B3KSJ7 Protein artemis HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28238.28238.3 19.13 15.25 2.147 3 1 1 0 1027.4863 3000.4788 S385s TMT10 380 (R) TVHRDsEEEDDYLFDDPLPIPLR (H) T(0.0)VHRDS(0.99)EEEDDY(0.0)LFDDPLPIPLR s:Phosphorylated S DCLRE1C 79461.9 5 1 3376.1 52.52 HUMAN 1 10.221 6.3116 ARVCRRKYCQRPCDN-p C9J6P4;Y77-p ARVCRRKYCQRPCDN 0.911605742223265 0.0192104793400816 0.019 -0.976 0.787187985809329 23.5883640518189 0.019 -0.976 0.834221159808447 0.00437686946838195 0.219610492965234 -4.68948299459954 C9J6P4 ZC3HAV1 C9J6P4.Y77.p_ZC3HAV1 C9J6P4_Y77y _1_1_77_77 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2|Q7Z2W4-3 Zinc finger CCCH-type antiviral protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11878.11878.4 11.04 11.04 99 1 1 1 0 576.2693 2222.1033 Y77y TMT10 77 (K) yCQRPCDNLHLCK (L) Y(1.0)CQRPCDNLHLCK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y ZC3HAV1 115909.2 2 1 320.1 11.04 HUMAN 1 0.7872 -23.5884 ARVEKVESPAKIHVF-p Q7KZF4;S755-p ARVEKVESPAKIHVF 0.622841097517516 0.265605767604356 0.073 -0.113333333333333 3.82075578387812 7.58171078229858 0.073 -0.113333333333333 0.4148818362625 0.17451345702849 0.88270803886178 -1.56203436583223 Q7KZF4 SND1 Q7KZF4.S755.p_SND1 Q7KZF4_S755s _1_1_755_755 Q7KZF4 Q7KZF4 Staphylococcal nuclease domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9897.9897.3 9.7 3.87 99 1 1 1 0 585.3412 1674.0405 S755s TMT10 750 (R) VEKVEsPAK (I) VEKVES(1.0)PAK K:TMT10,s:Phosphorylated S SND1 102679.8 2 5 1505.1 135.67 HUMAN 1 3.8208 -7.5817 ARVGAGDSQLKGVST-p P43246;S717-p ARVGAGDSQLKGVST 0.167704788841315 0.373133134396324 0.236333333333333 0.0876666666666667 15.4932592523324 5.67973340986449 0.236333333333333 0.0876666666666667 0.0282276078088847 0.270412435073352 2.9714844814814 1.22701610298607 P43246 MSH2 P43246.S717.p_MSH2 P43246_S717s _1_1_717_717 P43246 P43246|E9PHA6 DNA mismatch repair protein Msh2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11595.11595.2 10.87 5.56 99 1 1 1 0 706.8815 1332.7887 S717s TMT10 712 (R) VGAGDsQLK (G) VGAGDS(1.0)QLK K:TMT10,s:Phosphorylated S MSH2 105482.9 2 3 2818.1 69.47 HUMAN 1 15.4933 5.6797 ARVLRSKSLCHDEIE-p P30305;S375-p ARVLRSKSLCHDEIE 0.653865045628317 0.00354425123931495 -0.062 -0.642333333333333 3.45926869264849 36.5569938416095 -0.062 -0.642333333333333 0.450892623841231 0.000220953362873769 -0.812246258147976 -8.68545775625962 P30305 CDC25B P30305.S375.p_CDC25B P30305_S375s _1_1_375_375 P30305 P30305-4|P30305-2|P30305-3|B4DIG0|G8JLH2 M-phase inducer phosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23508.23508.5 20.97 20.97 12.995 4 1 1 0 680.1305 3316.652 S375s TMT10 375 (K) sLCHDEIENLLDSDHRELIGDYSK (A) S(0.99)LCHDEIENLLDS(0.0)DHRELIGDY(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CDC25B 65671 4 12 563.1 271.52 HUMAN 1 -3.4593 -36.557 ARVNRSQSFAGVLGS-p Q6ZS17-4;S42-p ARVNRSQSFAGVLGS 0.907675071086955 0.139277789994146 -0.017 -0.209 0.826457140487165 11.2795070280052 -0.017 -0.209 0.82671208442111 0.0744816513972605 -0.229762014913546 -2.20412792554959 Q6ZS17 FAM65A Q6ZS17.4.S42.p_FAM65A Q6ZS17-4_S42s _1_1_42_42 Q6ZS17-4 Q6ZS17-4|A0A0A0MTL6|Q6ZS17-3|Q6ZS17-2 Isoform 4 of Rho family-interacting cell polarization regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13432.13432.3 12.88 12.88 1.134 3 1 1 0 561.9403 1603.839 S42s TMT10 40 (R) SQsFAGVLGSHER (G) S(0.0)QS(0.99)FAGVLGS(0.0)HER s:Phosphorylated S RIPOR1 135393.6 1 1 1530.1 133.82 HUMAN 1 -0.8265 -11.2795 ARVVITQSPGKYVPP-p Q9H7F4;S333-p ARVVITQSPGKYVPP 0.0739615399485653 0.022743379782048 -0.576333333333333 -0.591 24.2756528358551 22.4349136542568 -0.576333333333334 -0.591 0.00373623957629653 0.00570832425259192 -4.86263038246762 -4.41730719934638 Q9H7F4 TMEM185B Q9H7F4.S333.p_TMEM185B Q9H7F4_S333s _1_1_333_333 Q9H7F4 Q9H7F4 Transmembrane protein 185B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20168.20168.4 17.61 17.61 2.382 3 1 1 0 619.3655 2394.4728 S333s TMT10 328 (R) VVITQsPGKYVPPPPK (L) VVIT(0.0)QS(0.99)PGKY(0.0)VPPPPK K:TMT10,s:Phosphorylated S TMEM185B 40997.9 5 1 4626.1 28.64 HUMAN 1 -24.2757 -22.4349 ARYEEGESEAESITS-p Q86U86;S371-p ARYEEGESEAESITS 0.360620771574816 0.190359403867021 -0.193 0.191333333333333 8.23522084101578 9.47316021250391 -0.193 0.191333333333333 0.150133606008906 0.112897409984141 -1.67594237677411 1.88958765353689 Q86U86 PBRM1 Q86U86.S371.p_PBRM1 Q86U86_S371s _1_1_371_371 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-9|Q86U86-3|Q86U86-7|Q86U86-4|Q86U86-5|Q86U86-6 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37639.37639.3 28.28 28.28 3.493 9 1 1 0 1239.213 3635.6573 S371s TMT10 366 (R) YEEGEsEAESITSFMDVSNPFYQLYDTVR (S) Y(0.0)EEGES(0.99)EAES(0.0)IT(0.0)S(0.0)FMDVS(0.0)NPFY(0.0)QLY(0.0)DT(0.0)VR s:Phosphorylated S PBRM1 194199.5 3 8 194.1 462.54 HUMAN 1 -8.2352 9.4732 ARYEKKRSGSLERDR-p Q8IXT5;S375-p ARYEKKRSGSLERDR 0.602842445324844 0.0120284235378374 -0.122 0.577333333333333 4.05960763031394 26.8170653204422 -0.122 0.577333333333333 0.392680411081687 0.00208110248574041 -0.928506633714159 5.51165980475405 Q8IXT5 RBM12B Q8IXT5.S375.p_RBM12B Q8IXT5_S375sS377s_2_2_375_377 Q8IXT5 Q8IXT5|B9ZVT1 RNA-binding protein 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4690.4690.3 10.94 10.94 10.941 3 2 2 0 681.3197 1882.0092 S375s S377s Hydrogen 375 (R) sGsLERDRPGHVSQK (Y) S(0.99)GS(0.99)LERDRPGHVS(0.0)QK K:TMT10-Lys-Only,s:Phosphorylated S RBM12B 118442.9 1 15 384.1 333.8 HUMAN 1 -4.0596 26.8171 ARYQEADSEEEEVVP-p O60312;S466-p ARYQEADSEEEEVVP 0.606652354590339 0.179221418469082 -0.0866666666666667 -0.189333333333333 4.01535642412359 9.81816624602374 -0.0866666666666667 -0.189333333333333 0.396701970388947 0.104275762778166 -0.920063864543754 -1.94936414879046 O60312 ATP10A O60312.S466.p_ATP10A O60312_S466s _1_1_466_466 O60312 O60312|G3V261 Probable phospholipid-transporting ATPase VA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13482.13482.2 20.31 20.31 13.707 2 1 1 0 994.9378 1908.9024 S466s TMT10 461 (R) YQEADsEEEEVVPR (G) Y(0.0)QEADS(0.99)EEEEVVPR s:Phosphorylated S ATP10A 169910.4 2 1 4504.1 30.62 HUMAN 1 -4.0154 -9.8182 ARYSNVSSIEDSFAM-p O15231-3;S603-p ARYSNVSSIEDSFAM 0.347334774965076 0.910439216194284 -0.149 0.012 8.53359468734282 0.570650858418223 -0.149 0.012 0.140165306575038 0.8768693986593 -1.72762356817262 0.162403037765514 O15231 ZNF185 O15231.3.S603.p_ZNF185 O15231-3_S603s _1_1_603_603 O15231-3 O15231-3|O15231-7|O15231-4|O15231-5|O15231-2|O15231-9 Isoform 3 of Zinc finger protein 185 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25071.25071.3 10.47 10.47 1.157 5 1 1 0 749.023 2165.0837 S603s TMT10 598 (R) YSNVSsIEDSFAMEK (K) Y(0.0)S(0.0)NVS(0.0)S(0.99)IEDS(0.0)FAMEK K:TMT10,s:Phosphorylated S ZNF185 74524.1 1 17 166.1 494.62 HUMAN 1 -8.5336 0.5707 ASAERSCTPSPDQIS-p C9J6P4;T273-p ASAERSCTPSPDQIS 0.439356541484028 0.665698926353992 0.103 0.0603333333333334 6.57912997305766 2.41886306283566 0.103 0.0603333333333333 0.219830021659153 0.572946002577174 1.38712175178111 0.599611150140793 C9J6P4 ZC3HAV1 C9J6P4.T273.p_ZC3HAV1 C9J6P4_T273tS275s_2_2_273_275 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2|Q7Z2W4-3 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7139.7139.2 10.84 10.84 2.252 4 2 2 0 887.3647 1613.7903 T273t S275s TMT10 271 (R) SCtPsPDQISHR (A) S(0.0)CT(0.99)PS(0.99)PDQIS(0.0)HR C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S ZC3HAV1 115909.2 6 19 361.1 343.37 HUMAN 1 6.5791 2.4189 ASAGRAPSPTLGSPR-p Q9ULI4;S1262-p ASAGRAPSPTLGSPR 0.603894408148596 0.028787920063727 0.0786666666666667 -0.345333333333333 4.04316696438361 20.8621540844789 0.0786666666666667 -0.345333333333333 0.394169760578349 0.00819944753906313 0.925372059727616 -4.06245744519207 Q9ULI4 KIF26A Q9ULI4.S1262.p_KIF26A Q9ULI4_S1262s _1_1_1262_1262 Q9ULI4 Q9ULI4|C9JFF0 Kinesin-like protein KIF26A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10161.10161.3 10.5 10.5 1.408 5 1 1 0 865.414 2514.2568 S1262s TMT10 1247 (R) VGECDTQAASAGRAPsPTLGSPR (L) VGECDT(0.0)QAAS(0.0)AGRAPS(0.99)PT(0.0)LGS(0.0)PR C:Carbamidomethylation,s:Phosphorylated S KIF26A 197210.7 1 1 6624.1 10.5 HUMAN 1 4.0432 -20.8622 ASAKRAQSFAERLRL-p O60256;S198-p ASAKRAQSFAERLRL 0.959642316758263 0.0789408108331511 -0.00933333333333333 0.327 0.346363456059132 14.6361189035038 -0.00933333333333333 0.327 0.923344261418164 0.0343865107574428 -0.100792749604991 2.80870097231193 O60256 PRPSAP2 O60256.S198.p_PRPSAP2 O60256_S198s _1_1_198_198 O60256 O60256|O60256-2|O60256-3|O60256-4 Phosphoribosyl pyrophosphate synthase-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4695.4695.3 10.85 10.85 99 1 1 1 0 425.2136 1193.6588 S198s TMT10 195 (K) RAQsFAER (L) RAQS(1.0)FAER s:Phosphorylated S PRPSAP2 41324.4 2 3 2642.1 75.43 HUMAN 1 -0.3464 14.6361 ASALLFSSDEEDQWN-p Q641Q2;S620-p ASALLFSSDEEDQWN 0.286866398353762 0.216209789161595 0.263333333333333 0.146666666666667 10.2305367107806 8.7524664076411 0.263333333333333 0.146666666666667 0.0948301262879768 0.133276432521601 2.0217925606425 1.76489866696806 Q641Q2 FAM21A Q641Q2.S620.p_FAM21A Q641Q2_S619sS620s_2_2_619_620 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27456.27456.4 14.74 14.74 6.363 7 2 2 0 866.8925 3304.5919 S619s S620s TMT10 613 (K) ASALLFssDEEDQWNIPASQTHLASDSR (S) AS(0.0)ALLFS(0.99)S(0.99)DEEDQWNIPAS(0.0)QT(0.0)HLAS(0.0)DS(0.0)R s:Phosphorylated S WASHC2A 147352.2 2 70 12.1 1178.3 HUMAN 1 10.2305 8.7525 ASALRSFSPLQPGQA-p Q7Z3C6;S656-p ASALRSFSPLQPGQA 0.760364767758717 0.0607710719064024 0.045 -0.219333333333333 2.28181866094543 16.2041374867652 0.045 -0.219333333333333 0.59131396241023 0.0239654865947426 0.570346250876488 -3.10525662964369 Q7Z3C6 ATG9A Q7Z3C6.S656.p_ATG9A Q7Z3C6_S656s _1_1_656_656 Q7Z3C6 Q7Z3C6|Q7Z3C6-2 Autophagy-related protein 9A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15962.15962.2 15.26 13.56 2.957 3 1 1 0 876.4374 1671.9016 S656s TMT10 654 (R) SFsPLQPGQAPTGR (A) S(0.0)FS(0.99)PLQPGQAPT(0.0)GR s:Phosphorylated S ATG9A 95415.3 4 3 1664.1 122.57 HUMAN 1 2.2818 -16.2041 ASAPAKESPRKGAAP-p E7ETY2;S381-p ASAPAKESPRKGAAP 0.137301954068809 0.00227464949884667 0.450333333333333 -0.786333333333333 17.6790259932708 40.824365898626 0.450333333333333 -0.786333333333333 0.0170646506070451 8.27110263836562e-05 3.39759520005537 -10.5084392617631 E7ETY2 TCOF1 E7ETY2.S381.p_TCOF1 E7ETY2_S381s _1_1_381_381 E7ETY2 Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6706.6706.3 19.63 16.25 4.464 4 1 1 0 699.0356 2015.1286 S381s TMT10 368 (K) TSQVGAASAPAKEsPR (K) T(0.0)S(0.0)QVGAAS(0.0)APAKES(0.99)PR K:TMT10,s:Phosphorylated S TCOF1 152529.5 6 11 19.1 1034.65 HUMAN 1 17.679 -40.8244 ASAPAKGTPGKGATP-p E7ETY2;T310-p ASAPAKGTPGKGATP 0.147090784109906 0.000952253650599092 0.581666666666667 -1.259 16.8945798540833 53.2320780475403 0.581666666666667 -1.259 0.0204428769526916 4.75107838085487e-06 3.24190012771315 -18.0419066960532 E7ETY2 TCOF1 E7ETY2.T310.p_TCOF1 E7ETY2_T310t _1_1_310_310 E7ETY2 Q13428|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2|Q13428-5 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7529.7529.4 14.17 14.17 7.421 2 1 1 0 456.5154 1743.0732 T310t TMT10 302 (R) AASAPAKGtPGK (G) AAS(0.0)APAKGT(0.99)PGK K:TMT10,t:Phosphorylated T TCOF1 152529.5 6 7 19.1 1034.65 HUMAN 1 16.8946 -53.2321 ASAPELESKESVL__-p P43007;S527-p ASAPELESKESVL__ 0.767866039421668 0.882831065887571 -0.0733333333333333 -0.0203333333333333 2.19732554781945 0.760099001995396 -0.0733333333333333 -0.0203333333333333 0.602930765807543 0.839440850364111 -0.552070935595012 -0.21254936898987 P43007 SLC1A4 P43007.S527.p_SLC1A4 P43007_S527sS530s_2_2_527_530 P43007 P43007|P43007-2 Neutral amino acid transporter A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24401.24401.4 17.92 17.92 2.237 7 2 2 0 963.4681 3690.9114 S527s S530s TMT10 502 (K) SEEETSPLVTHQNPAGPVASAPELEsKEsVL (-) S(0.0)EEET(0.0)S(0.0)PLVT(0.0)HQNPAGPVAS(0.0)APELES(0.99)KES(0.99)VL K:TMT10,s:Phosphorylated S SLC1A4 56121.4 2 5 2549.1 78.96 HUMAN 1 -2.1973 -0.7601 ASARVENSPQVDGSP-p Q8WVB6-2;S893-p ASARVENSPQVDGSP 0.301639765350884 0.0442119812566844 0.16 0.369 9.76092404135239 18.1397759898586 0.16 0.369 0.105659267577926 0.0153469614075494 1.94020312589309 3.48772536196369 Q8WVB6 CHTF18 Q8WVB6.2.S893.p_CHTF18 Q8WVB6-2_S893sS899s_2_2_893_899 Q8WVB6-2 A0A0D9SF58|Q8WVB6-2|E7EXA6|Q8WVB6-3 Isoform 2 of Chromosome transmission fidelity protein 18 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35627.35627.3 16.03 16.03 99 2 2 2 0 989.8224 2807.5191 S893s S899s TMT10 890 (R) VENsPQVDGsPPGLEGLLGGIGEK (G) VENS(1.0)PQVDGS(1.0)PPGLEGLLGGIGEK K:TMT10,s:Phosphorylated S CHTF18 110890.8 4 8 1974.1 104.64 HUMAN 1 9.7609 18.1398 ASAVSELSPRERSPA-p Q9Y2W1;S243-p ASAVSELSPRERSPA 0.332256356782789 0.18631080456314 0.137333333333333 0.132333333333333 8.93456679829912 9.59741216260383 0.137333333333333 0.132333333333333 0.127803668529465 0.109713175103767 1.79703595437468 1.91110586217261 Q9Y2W1 THRAP3 Q9Y2W1.S243.p_THRAP3 Q9Y2W1_S243s _1_1_243_243 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10319.10534.2 15.29 9.04 2.888 3 1 1 0 663.3373 1245.7 S243s TMT10 236 (R) ASAVSELsPR (E) AS(0.0)AVS(0.0)ELS(0.99)PR s:Phosphorylated S THRAP3 108720.9 12 59 10.2 1293.04 HUMAN 1 8.9346 9.5974 ASAYVFASPGCKKWD-p O95861-2;S240-p ASAYVFASPGCKKWD 0.936234507605524 0.0565649381834111 -0.0133333333333333 0.294666666666667 0.55700567497898 16.6256341346051 -0.0133333333333333 0.294666666666667 0.879628784421818 0.0217488644503115 -0.158741672666242 3.18689774739793 O95861 BPNT1 O95861.2.S240.p_BPNT1 O95861-2_S240s _1_1_240_240 O95861-2 O95861-2|A6NF51|O95861-4|O95861-3 Isoform 2 of 3'(2'),5'-bisphosphate nucleotidase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18321.18321.3 15.24 15.24 7.216 3 1 1 0 599.2996 1715.9191 S240s TMT10 233 (K) ASAYVFAsPGCK (K) AS(0.0)AY(0.0)VFAS(0.99)PGCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BPNT1 36142.7 1 2 4055.1 38.47 HUMAN 1 -0.557 16.6256 ASCHLEYSPERGKAE-p P51449;S205-p ASCHLEYSPERGKAE 0.505331441375725 0.20489266027851 0.192333333333333 0.213666666666667 5.47367726576982 9.0577955285131 0.192333333333333 0.213666666666667 0.283551711773805 0.124228272820243 1.19019737813717 1.81770970026481 P51449 RORC P51449.S205.p_RORC P51449_S205s _1_1_205_205 P51449 P51449|P51449-2 Nuclear receptor ROR-gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10903.10903.4 17.65 17.65 4.254 3 1 1 0 621.8084 2404.2443 S205s TMT10 193 (K) AGLNGASCHLEYsPERGK (A) AGLNGAS(0.0)CHLEY(0.0)S(0.99)PERGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RORC 59392.4 2 1 4526.1 30.33 HUMAN 1 5.4737 9.0578 ASDFRGGSLMSGSSA-p Q5TH69;S1103-p ASDFRGGSLMSGSSA 0.222155146551169 0.0277238968700976 0.266333333333333 0.457666666666667 12.5728712786402 21.108380424969 0.266333333333333 0.457666666666667 0.0552984390258444 0.00774750664677122 2.43437788264584 4.11683454249651 Q5TH69 ARFGEF3 Q5TH69.S1103.p_ARFGEF3 Q5TH69_S1103s _1_1_1103_1103 Q5TH69 Q5TH69 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13681.13681.3 9.48 9.48 1.137 5 1 1 0 723.0245 2087.0956 S1103s TMT10 1096 (R) ASDFRGGsLMSGSSAAK (V) AS(0.0)DFRGGS(0.99)LMS(0.0)GS(0.0)S(0.0)AAK K:TMT10,s:Phosphorylated S ARFGEF3 244013.5 1 7 618.1 260.46 HUMAN 1 12.5729 21.1084 ASDKEGMSPAKRTKL-p Q13523;S93-p ASDKEGMSPAKRTKL 0.217359173580377 0.00526365807851177 -0.465 0.646 12.7672211338629 33.1164988371087 -0.465 0.646 0.0528783489672619 0.000487921680656972 -2.46920480722496 7.42588620753141 Q13523 PRPF4B Q13523.S93.p_PRPF4B Q13523_S93s _1_1_93_93 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8132.8132.2 9.83 5.43 99 1 1 1 0 629.3194 1177.6651 S93s TMT10 90 (K) EGMsPAK (R) EGMS(1.0)PAK K:TMT10,s:Phosphorylated S PRPF4B 117327.1 5 3 70.1 666.55 HUMAN 1 -12.7672 33.1165 ASDMGGESPGSRSSN-p P50851;S1767-p ASDMGGESPGSRSSN 0.296077692655468 0.756603606161778 0.164333333333333 0.0336666666666667 9.95448021298611 1.67514082114533 0.164333333333333 0.0336666666666667 0.101053643973154 0.67996399663172 1.97380317713927 0.435546422765451 P50851 LRBA P50851.S1767.p_LRBA P50851_S1767s _1_1_1767_1767 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27940.27940.3 24.15 24.15 1.604 14 1 1 0 1364.9642 4012.9243 S1767s TMT10 1733 (K) SAVSPSTFNTSIPTNAVSVVSSVDSAQASDMGGEsPGSR (S) S(0.0)AVS(0.0)PS(0.0)T(0.0)FNT(0.0)S(0.0)IPT(0.0)NAVS(0.0)VVS(0.0)S(0.0)VDS(0.0)AQAS(0.0)DMGGES(0.99)PGS(0.0)R s:Phosphorylated S LRBA 321783.7 9 23 74.1 649.16 HUMAN 1 9.9545 1.6751 ASDNDFVTPEPRRTT-p Q15021;T1339-p ASDNDFVTPEPRRTT 0.684616339845596 0.0044956694532519 0.0556666666666667 -0.593666666666667 3.08666986859756 34.4366736641714 0.0556666666666667 -0.593666666666667 0.491284444295372 0.000360024978880453 0.737961614161019 -7.88911923248737 Q15021 NCAPD2 Q15021.T1339.p_NCAPD2 Q15021_T1339t _1_1_1339_1339 Q15021 Q15021 Condensin complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19259.19259.2 17.8 17.8 2.311 5 1 1 0 1209.0648 2337.156 T1339t TMT10 1325 (R) YQPLASTASDNDFVtPEPR (R) Y(0.0)QPLAS(0.0)T(0.0)AS(0.0)DNDFVT(0.99)PEPR t:Phosphorylated T NCAPD2 158605.7 1 8 1192.1 168.06 HUMAN 1 3.0867 -34.4367 ASDSEADSDTEVPKD-p Q8WVC0;S300-p ASDSEADSDTEVPKD 0.145835187369471 0.0206907854655544 -0.511666666666667 0.417333333333333 17.0317744128327 23.0415940807811 -0.511666666666667 0.417333333333334 0.0198071759143623 0.0049641008035674 -3.26889566830334 4.55914896484008 Q8WVC0 LEO1 Q8WVC0.S300.p_LEO1 Q8WVC0_S294sS296sS300s_3_3_294_300 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17433.17433.2 13.8 9.91 2.119 4 3 3 0 1224.012 2207.108 S294s S296s S300s TMT10 290 (K) NAIAsDsEADsDTEVPK (D) NAIAS(0.99)DS(0.99)EADS(0.99)DT(0.0)EVPK K:TMT10,s:Phosphorylated S LEO1 75516.9 7 23 514.1 286.88 HUMAN 1 -17.0318 23.0416 ASDSGVESFDEGSSH-p Q12929;S815-p ASDSGVESFDEGSSH 0.230670023869533 0.0497121111153576 0.29 -0.344333333333333 12.2421788739193 17.4313652680356 0.29 -0.344333333333333 0.0596735826563285 0.0180660610375871 2.37536546725452 -3.34545432270306 Q12929 EPS8 Q12929.S815.p_EPS8 Q12929_S815s _1_1_815_815 Q12929 Q12929|Q12929-2 Epidermal growth factor receptor kinase substrate 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15333.15333.2 20.95 20.95 3.561 6 1 1 0 1081.4602 2081.9461 S815s TMT10 804 (K) ISAAASDSGVEsFDEGSSH (-) IS(0.0)AAAS(0.0)DS(0.0)GVES(0.99)FDEGS(0.0)S(0.0)H s:Phosphorylated S EPS8 92222.2 2 9 994.1 191.04 HUMAN 1 12.2422 -17.4314 ASDSPHASPKHVDAN-p Q9HCD6-2;S404-p ASDSPHASPKHVDAN 0.89097389941945 0.828650801620176 -0.02 0.0223333333333333 0.981028479589651 1.14065022005542 -0.02 0.0223333333333333 0.797805731591509 0.769015295696302 -0.269112827790232 0.308765218539598 Q9HCD6 TANC2 Q9HCD6.2.S404.p_TANC2 Q9HCD6-2_S400sS404s_2_2_400_404 Q9HCD6-2 Q9HCD6-2|Q9HCD6-4|Q9HCD6-3 Isoform 2 of Protein TANC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8488.8488.3 9.72 9.72 2.468 3 2 2 0 619.298 1695.943 S400s S404s TMT10 395 (R) QIASDsPHAsPK (H) QIAS(0.0)DS(0.99)PHAS(0.99)PK K:TMT10,s:Phosphorylated S TANC2 222282.4 4 18 348.1 351.89 HUMAN 1 -0.981 1.1407 ASDVQEDSAMEDKFY-p Q86Y13;S713-p ASDVQEDSAMEDKFY 0.161635164088614 0.0870709418155127 -0.281333333333333 0.289333333333333 15.8434135789758 14.0339611567781 -0.281333333333333 0.289333333333333 0.0260410590353384 0.0395006174510343 -3.03818145237901 2.69753299756099 Q86Y13 DZIP3 Q86Y13.S713.p_DZIP3 Q86Y13_S713s_1_1_713_713 Q86Y13 Q86Y13 E3 ubiquitin-protein ligase DZIP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14931.14931.3 7.65 7.65 1.147 2 1 1 0 931.4568 2696.3904 S713s M715m TMT10 701 (R) LIKDDASDVQEDsAmEDK (F) LIKDDAS(0.0)DVQEDS(0.99)AM(1.0)EDK K:TMT10,s:Phosphorylated S,m:Oxidized methionine DZIP3 140142.2 1 4 2887.1 66.9 HUMAN 1 -15.8434 14.034 ASDWAVDSNLCGAMD-p Q99758;S872-p ASDWAVDSNLCGAMD 0.640121503544206 0.0557606904135744 0.079 0.247 3.61860569874263 16.7033658441934 0.079 0.247 0.434649745956822 0.0213630578029617 0.843485540939793 3.20204942052413 Q99758 ABCA3 Q99758.S872.p_ABCA3 Q99758_S872s _1_1_872_872 Q99758 Q99758|H0Y3H2 ATP-binding cassette sub-family A member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33197.33197.4 16.98 15.27 3.151 3 1 1 0 822.6144 3207.4772 S872s TMT10 865 (R) ASDWAVDsNLCGAMDPSDGIGALIEEER (T) AS(0.0)DWAVDS(0.99)NLCGAMDPS(0.0)DGIGALIEEER C:Carbamidomethylation,s:Phosphorylated S ABCA3 192956.2 2 10 1112.1 175.87 HUMAN 1 3.6186 16.7034 ASEEELPSDVDLNDP-p Q9H501;S663-p ASEEELPSDVDLNDP 0.147090784109906 0.0207353276371136 0.263 0.317333333333333 16.8967219913264 23.0270187074218 0.263 0.317333333333333 0.0204327960855125 0.00498078882855867 3.2423208861666 4.55570742224138 Q9H501 ESF1 Q9H501.S663.p_ESF1 Q9H501_S663s _1_1_663_663 Q9H501 Q9H501 ESF1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29680.29680.5 24.83 18.79 2.945 3 1 1 0 710.3407 3467.6994 S663s TMT10 651 (K) ALAEEASEEELPsDVDLNDPYFAEEVK (Q) ALAEEAS(0.0)EEELPS(0.99)DVDLNDPY(0.0)FAEEVK K:TMT10,s:Phosphorylated S ESF1 99193.8 3 9 500.1 291.39 HUMAN 1 16.8967 23.027 ASEKHRGSADYSMEA-p H0YL70;S227-p ASEKHRGSADYSMEA 0.814399806622497 0.134182360081184 -0.0413333333333333 0.227333333333333 1.71115374210788 11.4966469039443 -0.0413333333333333 0.227333333333333 0.674348857098705 0.0708492585445737 -0.44384030623613 2.24229441923788 H0YL70 TLE3 H0YL70.S227.p_TLE3 H0YL70_S227s _1_1_227_227 H0YL70 H0YL70|Q04726-6|Q04726-3|Q04726-7|Q04726-2|H0YNT2|F5H7D6|H0YKN8|H0YKT5|Q04726-4|A0A0D9SES8|Q04726-5|H0YLW9|H0YKH0 Transducin-like enhancer protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5337.5337.3 12.16 12.16 2.485 3 1 1 0 630.6381 1809.9318 S227s TMT10 224 (K) HRGsADYSMEAK (K) HRGS(0.99)ADY(0.0)S(0.0)MEAK K:TMT10,s:Phosphorylated S TLE3 85275.2 9 2 447.1 309.48 HUMAN 1 -1.7112 11.4966 ASELACPTPKEDGLA-p P49327;T2204-p ASELACPTPKEDGLA 0.441240567264859 0.176839130756311 -0.119333333333333 -0.211333333333333 6.54299280440071 9.89674115258826 -0.119333333333333 -0.211333333333333 0.221666834578422 0.102406113632447 -1.38075464226138 -1.96299173043273 P49327 FASN P49327.T2204.p_FASN P49327_T2204t _1_1_2204_2204 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19226.19226.4 24.56 24.56 7.733 3 1 1 0 881.1897 3441.7684 T2204t TMT10 2194 (K) ADEASELACPtPKEDGLAQQQTQLNLR (S) ADEAS(0.0)ELACPT(0.99)PKEDGLAQQQT(0.0)QLNLR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T FASN 276046.1 9 25 175.1 481.87 HUMAN 1 -6.543 -9.8967 ASEPRPLSKASQGSQ-p Q9H425;S156-p ASEPRPLSKASQGSQ 0.200655579876407 0.155887827199907 -0.235 -0.150333333333333 13.5616951239455 10.6143492292039 -0.235 -0.150333333333333 0.044038294113471 0.0868090647035645 -2.61279110972399 -2.08777250259597 Q9H425 C1orf198 Q9H425.S156.p_C1orf198 Q9H425_S156s_1_1_156_156 Q9H425 Q9H425|Q9H425-3 Uncharacterized protein C1orf198 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26721.26721.5 9.22 9.22 1.189 8 1 1 0 721.1669 3520.8358 N145n S156s TMT10 129 (K) SQMEFSISALSIQEPSnGTAASEPRPLsK (A) S(0.0)QMEFS(0.0)IS(0.0)ALS(0.0)IQEPS(0.0)N(1.0)GT(0.0)AAS(0.0)EPRPLS(0.99)K K:TMT10,n:Deamidated,s:Phosphorylated S C1orf198 36459.9 3 4 1196.1 167.35 HUMAN 1 -13.5617 -10.6143 ASERVVPSPLQFCAA-p Q9Y2F5;S1712-p ASERVVPSPLQFCAA 0.463691129215169 0.057381518122085 0.108333333333333 -0.233 6.15675233499763 16.5371426927366 0.108333333333333 -0.233 0.242284017541398 0.022196562942477 1.31244001914387 -3.16968536818683 Q9Y2F5 ICE1 Q9Y2F5.S1712.p_ICE1 Q9Y2F5_S1712s _1_1_1712_1712 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25786.25786.3 18.39 18.39 7.744 2 1 1 0 685.037 1973.1294 S1712s TMT10 1709 (R) VVPsPLQFCAATPK (H) VVPS(0.99)PLQFCAAT(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ICE1 250910.2 1 18 216.1 433.09 HUMAN 1 6.1568 -16.5371 ASESYAGSEKKHEKL-p J3QR07;S326-p ASESYAGSEKKHEKL 0.0633051069991828 0.550359098332431 0.505333333333333 -0.0683333333333333 26.030011891455 3.49120538000947 0.505333333333333 -0.0683333333333333 0.00249458789648078 0.447589059037512 5.3094670706276 -0.818405507854384 J3QR07 YTHDC1 J3QR07.S326.p_YTHDC1 J3QR07_S326s _1_1_326_326 J3QR07 J3QR07|Q96MU7 YTH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5247.5247.4 11.02 11.02 1.103 7 1 1 0 717.125 2785.5138 S326s TMT10 315 (R) SGSSASESYAGsEKKHEK (L) S(0.0)GS(0.0)S(0.0)AS(0.0)ES(0.0)Y(0.0)AGS(0.99)EKKHEK K:TMT10,s:Phosphorylated S YTHDC1 85871.1 2 12 702.1 239.92 HUMAN 1 26.03 -3.4912 ASETDTHSIGEKNSS-p Q12983;S151-p ASETDTHSIGEKNSS 0.538800686374925 0.00510538330354147 0.089 0.910333333333333 4.96266203659296 33.3578844929286 0.089 0.910333333333333 0.31895821804129 0.000461542343320401 1.09721125045182 7.50880798858341 Q12983 BNIP3 Q12983.S151.p_BNIP3 Q12983_S151s _1_1_151_151 Q12983 Q12983 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7038.7038.3 14.23 14.23 3.498 4 1 1 0 604.9649 1732.9118 S151s TMT10 144 (R) ASETDTHsIGEK (N) AS(0.0)ET(0.0)DT(0.0)HS(0.99)IGEK K:TMT10,s:Phosphorylated S BNIP3 28002.8 2 1 4505.1 30.61 HUMAN 1 4.9627 33.3579 ASETTEGSQGDSKNA-p Q92793;S1578-p ASETTEGSQGDSKNA 0.18878716220005 0.0444566780154354 0.247333333333333 0.460333333333333 14.1777516763476 18.0981387438898 0.247333333333333 0.460333333333333 0.0382142052919648 0.0154948053759737 2.72561274092895 3.479285956255 Q92793 CREBBP Q92793.S1578.p_CREBBP Q92793_S1578s _1_1_1578_1578 Q92793 Q92793|Q92793-2 CREB-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5812.5812.4 18.5 18.5 2.663 7 1 1 0 767.3984 2986.5987 S1578s TMT10 1564 (R) KKEESTAASETTEGsQGDSK (N) KKEES(0.0)T(0.0)AAS(0.0)ET(0.0)T(0.0)EGS(0.99)QGDS(0.0)K K:TMT10,s:Phosphorylated S CREBBP 268199.1 1 18 591.1 264.37 HUMAN 1 14.1778 18.0981 ASEVLVDSAEEGSLA-p O95926;S13-p ASEVLVDSAEEGSLA 0.797816348721616 0.20537327455272 0.0406666666666667 0.127333333333333 1.89364919509691 9.04672607120311 0.0406666666666667 0.127333333333333 0.646599077232478 0.124545314277841 0.485118923198874 1.81579492573875 O95926 SYF2 O95926.S13.p_SYF2 O95926_S13s _1_1_13_13 O95926 O95926|O95926-2 Pre-mRNA-splicing factor SYF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35970.36169.4 18.4 18.24 2.418 3 1 1 0 791.6568 3083.6422 S13s Acetyl 2 (M) AAIAASEVLVDsAEEGSLAAAAELAAQKR (E) AAIAAS(0.0)EVLVDS(0.99)AEEGS(0.0)LAAAAELAAQKR K:TMT10,s:Phosphorylated S SYF2 28778.9 4 1 3963.1 40.13 HUMAN 1 1.8936 9.0467 ASFIRKASDVHEVRK-p P14618;S249-p ASFIRKASDVHEVRK 0.677572033046536 0.358850858004031 -0.088 0.128333333333333 3.16457539769889 5.90545831771087 -0.088 0.128333333333333 0.4825501558585 0.256716727666124 -0.753645708596601 1.26740635298206 P14618 PKM P14618.S249.p_PKM P14618_S249s _1_1_249_249 P14618 P14618|P14618-2|P14618-3|B4DNK4|H3BR70|H3BQ34 Pyruvate kinase PKM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5205.5205.5 10.34 5.64 99 1 1 1 0 388.0259 1856.1321 S249s TMT10 247 (R) KAsDVHEVRK (V) KAS(1.0)DVHEVRK K:TMT10,s:Phosphorylated S PKM 58506.4 7 12 502.1 291.2 HUMAN 1 -3.1646 5.9055 ASFSIPGSSSRYSLG-p Q14573;S1838-p ASFSIPGSSSRYSLG 0.407878856431238 0.0169961888261017 0.112666666666667 -0.491 7.18637270112978 24.4183268952493 0.112666666666667 -0.491 0.191144906571731 0.00361549121385251 1.49359895560733 -4.89202790477473 Q14573 ITPR3 Q14573.S1838.p_ITPR3 Q14573_S1838s _1_1_1838_1838 Q14573 Q14573 Inositol 1,4,5-trisphosphate receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18755.18755.2 12.29 8.67 1.183 5 1 1 0 752.3745 1423.7743 S1838s TMT10 1830 (R) VASFSIPGsSSR (Y) VAS(0.0)FS(0.0)IPGS(0.99)S(0.0)S(0.0)R s:Phosphorylated S ITPR3 307010.8 3 6 1377.1 148.68 HUMAN 1 7.1864 -24.4183 ASGARNDSPTQIPVS-p Q8TC07-2;S658-p ASGARNDSPTQIPVS 0.582575200829836 0.72197682317235 0.131666666666667 -0.041 4.31760408775136 1.94906975635149 0.131666666666667 -0.041 0.370032262577197 0.638400214648304 0.977373614446686 -0.49743617955198 Q8TC07 TBC1D15 Q8TC07.2.S658.p_TBC1D15 Q8TC07-2_S658s _1_1_658_658 Q8TC07-2 Q8TC07|Q8TC07-3|Q8TC07-2 Isoform 2 of TBC1 domain family member 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11609.11609.2 14.61 12.89 2.211 4 1 1 0 877.8705 1674.7752 S658s Hydrogen 656 (R) NDsPTQIPVSSDVCR (L) NDS(0.99)PT(0.0)QIPVS(0.0)S(0.0)DVCR C:Carbamidomethylation,s:Phosphorylated S TBC1D15 78306.6 5 9 1180.1 169.17 HUMAN 1 4.3176 -1.9491 ASGDEMVSLKDYCTR-p P07900;S476-p ASGDEMVSLKDYCTR 0.224767265517543 0.682408708998956 -0.203 0.057 12.4479668423543 2.27085457560434 -0.203 0.057 0.0569119302741415 0.592808664182621 -2.41205286449244 0.567913626419877 P07900 HSP90AA1 P07900.S476.p_HSP90AA1 P07900_S476s _1_1_476_476 P07900 P07900-2 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18636.18636.4 20.09 20.09 3.558 8 1 1 0 696.8222 2704.2999 S476s TMT10 465 (R) YYTSASGDEMVsLKDYCTR (M) Y(0.0)Y(0.0)T(0.0)S(0.0)AS(0.0)GDEMVS(0.99)LKDY(0.0)CT(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S HSP90AA1 85057.6 10 16 43.1 810.87 HUMAN 1 -12.448 2.2709 ASGKPSPSDPGSGTA-p Q5JRA6;S1727-p ASGKPSPSDPGSGTA 0.426515655420314 0.291938729251891 -0.156333333333333 -0.140333333333333 6.81699859331702 7.05741351997451 -0.156333333333333 -0.140333333333333 0.208113446106102 0.196905863123118 -1.42894020896233 -1.47064979760088 Q5JRA6 MIA3 Q5JRA6.S1727.p_MIA3 Q5JRA6_S1727s _1_1_1727_1727 Q5JRA6 Q5JRA6|Q5JRA6-2|Q5JRA6-4 Transport and Golgi organization protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15168.15168.4 19.1 16.64 1.109 10 1 1 0 806.1221 3141.4981 S1727s TMT10 1716 (R) WSAEASGKPSPsDPGSGTATMMNSSSR (G) WS(0.0)AEAS(0.0)GKPS(0.0)PS(0.99)DPGS(0.0)GT(0.0)AT(0.0)MMNS(0.0)S(0.0)S(0.0)R K:TMT10,s:Phosphorylated S MIA3 214383.2 8 10 378.1 336.1 HUMAN 1 -6.817 -7.0574 ASGLSPLSPTVELRL-p Q8IW35-2;S416-p ASGLSPLSPTVELRL 0.761367946892999 0.313663291878184 -0.049 -0.097 2.27160433898301 6.65631479961305 -0.049 -0.097 0.592706330885401 0.215957613751412 -0.568144663358782 -1.40034036482877 Q8IW35 CEP97 Q8IW35.2.S416.p_CEP97 Q8IW35-2_S416s _1_1_416_416 Q8IW35-2 Q8IW35-2 Isoform 2 of Centrosomal protein of 97 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.34689.34689.5 30.3 30.3 1.659 10 1 1 0 1060.1283 5216.6383 S416s TMT10 380 (R) NDLHLEDIQTDEDKLNCSLLSSESTFMPVASGLSPLsPTVELR (L) NDLHLEDIQT(0.0)DEDKLNCS(0.0)LLS(0.0)S(0.0)ES(0.0)T(0.0)FMPVAS(0.0)GLS(0.0)PLS(0.99)PT(0.0)VELR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CEP97 100762.5 8 7 759.1 230.22 HUMAN 1 -2.2716 -6.6563 ASGMGGITAVTVNQS-p P05787;T64-p ASGMGGITAVTVNQS 0.959929852412734 0.966344543183164 0.00833333333333333 0.00433333333333334 0.343520139822317 0.211669838396715 0.00833333333333333 0.00433333333333334 0.923948970765448 0.952429889558736 0.0999944757420127 0.0624659683259858 P05787 KRT8 P05787.T64.p_KRT8 P05787_T64t_1_1_64_64 P05787 P05787|P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.37771.37973.4 16.77 13.92 13.149 6 1 1 0 1059.8021 4154.2117 T64t N69n N83n TMT10 48 (R) GGLGGGYGGASGMGGItAVTVnQSLLSPLVLEVDPnIQAVR (T) GGLGGGY(0.0)GGAS(0.0)GMGGIT(0.99)AVT(0.0)VN(1.0)QS(0.0)LLS(0.0)PLVLEVDPN(1.0)IQAVR t:Phosphorylated T,n:Deamidated KRT8 53703.3 84 15 69.1 672.47 HUMAN 1 0.3435 0.2117 ASGPQKRSPGDTAKD-p P40855;S54-p ASGPQKRSPGDTAKD 0.802456812622783 0.267154773845953 -0.0493333333333333 -0.257 1.84045706973145 7.54821187121095 -0.0493333333333333 -0.257 0.65456728103547 0.175864755615935 -0.473172881906285 -1.55620965919891 P40855 PEX19 P40855.S54.p_PEX19 P40855_S54s _1_1_54_54 P40855 P40855|B7Z8B3|E9PS71 Peroxisomal biogenesis factor 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19073.19073.3 12.88 7.7 3.2 3 1 1 0 811.4309 2352.3014 S54s TMT10 54 (R) sPGDTAKDALFASQEK (F) S(0.99)PGDT(0.0)AKDALFAS(0.0)QEK K:TMT10,s:Phosphorylated S PEX19 33091.2 6 3 2146.1 95.84 HUMAN 1 -1.8405 -7.5482 ASGRGAESPFEEKSG-p P46821;S1427-p ASGRGAESPFEEKSG 0.934979371920407 0.558116004478502 -0.0226666666666667 0.143 0.572638618420215 3.41467192601932 -0.0226666666666667 0.143 0.87646814854783 0.455546597687663 -0.162953104353101 0.803326657396069 P46821 MAP1B P46821.S1427.p_MAP1B P46821_S1427s _1_1_1427_1427 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10233.10233.2 7.17 7.17 99 1 1 1 0 651.7947 1222.6153 S1427s Hydrogen 1424 (R) GAEsPFEEK (S) GAES(1.0)PFEEK K:TMT10-Lys-Only,s:Phosphorylated S MAP1B 271827.6 1 12 210.1 442.48 HUMAN 1 -0.5726 3.4147 ASGSATNSNNHLIEP-p Q96PU5;S432-p ASGSATNSNNHLIEP 0.878752810701085 0.444981180621861 0.0313333333333333 0.098 1.10280152095386 4.68237616711139 0.0313333333333333 0.098 0.775746541237663 0.340221992192136 0.299469972953753 1.0453165507052 Q96PU5 NEDD4L Q96PU5.S432.p_NEDD4L Q96PU5_S432s _1_1_432_432 Q96PU5 A0A1B0GVY1|Q96PU5|Q96PU5-7|Q96PU5-5|Q96PU5-6|Q96PU5-4|Q96PU5-9 E3 ubiquitin-protein ligase NEDD4-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25436.25436.4 14.84 14.84 1.103 8 1 1 0 980.4816 3838.9344 S432s TMT10 410 (R) TTTWTRPIMQLAEDGASGSATNsNNHLIEPQIR (R) T(0.0)T(0.0)T(0.0)WT(0.0)RPIMQLAEDGAS(0.0)GS(0.0)AT(0.0)NS(0.99)NNHLIEPQIR s:Phosphorylated S NEDD4L 112272 1 10 495.1 293.21 HUMAN 1 1.1028 4.6824 ASHYKSKSPTISDKT-p O15014;S1313-p ASHYKSKSPTISDKT 0.207472569362699 0.0403911539482336 0.563333333333333 -0.714 13.1797403482227 18.6886792507801 0.563333333333333 -0.714 0.0480868097266243 0.0135248380957674 2.54350618496206 -3.59991630738857 O15014 ZNF609 O15014.S1313.p_ZNF609 O15014_S1313s _1_1_1313_1313 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.6615.6615.4 13.01 6.7 1.352 6 1 1 0 583.5688 2251.2861 S1313s TMT10 1311 (K) SKsPTISDKTSQER (D) S(0.0)KS(0.99)PT(0.0)IS(0.0)DKT(0.0)S(0.0)QER K:TMT10,s:Phosphorylated S ZNF609 152443.5 9 28 63.1 699.07 HUMAN 1 13.1797 -18.6887 ASIEKGGSLPKVEAK-p P06748;S260-p ASIEKGGSLPKVEAK 0.772026849554338 0.0883182235445611 0.041 -0.205 2.14929953234889 13.9491448614226 0.041 -0.205 0.609635216544302 0.0402796338298458 0.54161738220485 -2.68198435688836 P06748 NPM1 P06748.S260.p_NPM1 P06748_S260s _1_1_260_260 P06748 P06748|P06748-2 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12617.12617.2 13.35 13.35 99 1 1 1 0 877.0126 1673.0565 S260s TMT10 258 (K) GGsLPKVEAK (F) GGS(1.0)LPKVEAK K:TMT10,s:Phosphorylated S NPM1 32745.6 4 23 78.1 640.75 HUMAN 1 2.1493 -13.9491 ASIQKAQSLIDLGSS-p Q9NZM3;S210-p ASIQKAQSLIDLGSS 0.187863102695022 0.891478098816898 0.224 -0.0156666666666666 14.2510064628725 0.700316056377836 0.224 -0.0156666666666666 0.0375750315324231 0.851076099165992 2.73912123126356 -0.196900112316844 Q9NZM3 ITSN2 Q9NZM3.S210.p_ITSN2 Q9NZM3_S210s _1_1_210_210 Q9NZM3 Q9NZM3|A0A087WVF7|Q9NZM3-2|Q9NZM3-3|Q9NZM3-4 Intersectin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21967.21967.3 23.05 23.05 7.768 12 1 1 0 974.1558 2840.4889 S210s TMT10 208 (K) AQsLIDLGSSSSTSSTASLSGNSPK (T) AQS(0.99)LIDLGS(0.0)S(0.0)S(0.0)S(0.0)T(0.0)S(0.0)S(0.0)T(0.0)AS(0.0)LS(0.0)GNS(0.0)PK K:TMT10,s:Phosphorylated S ITSN2 194542 6 2 1476.1 139.1 HUMAN 1 14.251 -0.7003 ASIQPPQSPPETPQS-p Q9H792;S779-p ASIQPPQSPPETPQS 0.506895801990179 0.965508381695265 -0.092 -0.00466666666666663 5.44156342360895 0.218273190299971 -0.092 -0.00466666666666663 0.285656201995381 0.950982841279154 -1.18439678011346 -0.0643692018068518 Q9H792 PEAK1 Q9H792.S779.p_PEAK1 Q9H792_S779s _1_1_779_779 Q9H792 Q9H792|H0YN99 Pseudopodium-enriched atypical kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34720.34720.4 13.48 13.48 1.378 7 1 1 0 821.4386 3202.7724 S779s TMT10 763 (K) ASTVLSQIVASIQPPQsPPETPQSGPK (A) AS(0.0)T(0.0)VLS(0.0)QIVAS(0.0)IQPPQS(0.99)PPET(0.0)PQS(0.0)GPK K:TMT10,s:Phosphorylated S PEAK1 195156.9 1 6 583.1 265.81 HUMAN 1 -5.4416 -0.2183 ASIVKKRSEDDLRQQ-p P15924;S1629-p ASIVKKRSEDDLRQQ 0.215102413706098 0.32064971783101 0.315666666666667 0.264 12.8606308791314 6.53170705127542 0.315666666666667 0.264 0.0517531647105882 0.222243616134021 2.48598342355386 1.37840974547526 P15924 DSP P15924.S1629.p_DSP P15924_S1629s _1_1_1629_1629 P15924 P15924 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3372.3372.4 8.18 4.57 99 1 1 1 0 493.016 1889.0717 S1629s TMT10 1627 (K) KRsEDDLRQQR (D) KRS(1.0)EDDLRQQR K:TMT10,s:Phosphorylated S DSP 334221.3 1 8 104.1 590.4 HUMAN 1 12.8606 6.5317 ASKAVEESSDEERQR-p Q9BW71;S142-p ASKAVEESSDEERQR 0.384449353793913 0.0137040987711746 0.172333333333333 0.398333333333333 7.6865455378076 25.8788289662193 0.172333333333333 0.398333333333333 0.170351297676321 0.00258295656642598 1.58073272318563 5.26298452738416 Q9BW71 HIRIP3 Q9BW71.S142.p_HIRIP3 Q9BW71_S142s _1_1_142_142 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3189.3189.3 14.39 14.39 1.186 2 1 1 0 581.9299 1663.8085 S142s TMT10 138 (K) AVEEsSDEERQR (D) AVEES(0.99)S(0.0)DEERQR s:Phosphorylated S HIRIP3 62298.3 4 6 178.1 481.23 HUMAN 1 7.6865 25.8788 ASKEKTPSPKEEDEE-p Q9H1E3;S204-p ASKEKTPSPKEEDEE 0.452571807755226 0.0126876261348301 0.103 0.410333333333333 6.35162000051807 26.4410652266207 0.103 0.410333333333333 0.231653037915989 0.00226930817339493 1.34696875876074 5.41099315582571 Q9H1E3 NUCKS1 Q9H1E3.S204.p_NUCKS1 Q9H1E3_S204s _1_1_204_204 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9761.9761.4 19.72 15.5 1.122 3 1 1 0 795.4113 3098.6551 S204s TMT10 200 (K) EKTPsPKEEDEEPESPPEK (K) EKT(0.0)PS(0.99)PKEEDEEPES(0.0)PPEK K:TMT10,s:Phosphorylated S NUCKS1 27295.9 9 15 48.1 767.83 HUMAN 1 6.3516 26.4411 ASKGLGGSGGAGGPP-p Q9ULL5-3;S677-p ASKGLGGSGGAGGPP 0.148266672319898 0.840431189248542 -0.266 0.027 16.8114386093121 1.06101862404201 -0.266 0.027 0.0208380050559974 0.783245913356021 -3.22558769679726 0.289086328346185 Q9ULL5 PRR12 Q9ULL5.3.S677.p_PRR12 Q9ULL5-3_S677s _1_1_677_677 Q9ULL5-3 Q9ULL5-3 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20784.20784.3 14.71 14.71 3.56 3 1 1 0 761.0596 2201.1967 S677s TMT10 673 (K) GLGGsGGAGGPPGTPYELAK (E) GLGGS(0.99)GGAGGPPGT(0.0)PY(0.0)ELAK K:TMT10,s:Phosphorylated S PRR12 212010 1 8 182.1 477.91 HUMAN 1 -16.8114 1.061 ASKIPALSPSSGKSS-p Q5T5P2;S1806-p ASKIPALSPSSGKSS 0.476784104106263 0.616452954462957 -0.115666666666667 -0.0553333333333333 5.9204823407882 2.85548893581621 -0.115666666666667 -0.0553333333333333 0.255830173827947 0.518144755141218 -1.27038520609821 -0.690810146480294 Q5T5P2 KIAA1217 Q5T5P2.S1806.p_KIAA1217 Q5T5P2_S1806s _1_1_1806_1806 Q5T5P2 Q5T5P2|Q5T5P2-10|Q5T5P2-7 Sickle tail protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19184.19184.2 9.82 5.2 1.494 3 1 1 0 747.9212 1414.867 S1806s TMT10 1802 (K) IPALsPSSGK (S) IPALS(0.99)PS(0.0)S(0.0)GK K:TMT10,s:Phosphorylated S KIAA1217 214739.6 2 20 303.1 376.04 HUMAN 1 -5.9205 -2.8555 ASKKPLLSPIPELPE-p Q69YH5;S591-p ASKKPLLSPIPELPE 0.474773316010134 0.573763212763696 -0.105 -0.0866666666666667 5.95670947707068 3.2520622299861 -0.105 -0.0866666666666667 0.253705015154883 0.472926638311947 -1.27684788393329 -0.771046512030069 Q69YH5 CDCA2 Q69YH5.S591.p_CDCA2 Q69YH5_S591s _1_1_591_591 Q69YH5 Q69YH5|E9PEI0 Cell division cycle-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.33510.33510.3 16.22 16.22 9.603 4 1 1 0 1060.2588 3098.794 S591s TMT10 587 (K) KPLLsPIPELPEVPEMTPSIPSIR (R) KPLLS(0.99)PIPELPEVPEMT(0.0)PS(0.0)IPS(0.0)IR K:TMT10,s:Phosphorylated S CDCA2 114214.8 1 9 407.1 324.13 HUMAN 1 -5.9567 -3.2521 ASKKSRLSSSSSNDS-p Q09666;S5863-p ASKKSRLSSSSSNDS 0.832987870919974 0.0155209282366236 0.0333333333333333 0.349666666666667 1.53124838448712 25.0120064451793 0.0333333333333333 0.349666666666667 0.702870249980225 0.00315354734450203 0.402295639363433 5.04052313645839 Q09666 AHNAK Q09666.S5863.p_AHNAK Q09666_S5863s _1_1_5863_5863 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4118.4118.2 10.79 5.23 1.122 7 1 1 0 982.4777 1883.9823 S5863s TMT10 5860 (K) SRLsSSSSNDSGNK (V) S(0.0)RLS(0.99)S(0.0)S(0.0)S(0.0)S(0.0)NDS(0.0)GNK K:TMT10,s:Phosphorylated S AHNAK 629603.7 11 168 1.1 4313.36 HUMAN 1 1.5312 25.012 ASKLPLVTPHTQCRL-p P62191;T53-p ASKLPLVTPHTQCRL 0.659007682953711 0.462155805418311 0.076 -0.118666666666667 3.39906050126262 4.47065225840844 0.076 -0.118666666666667 0.457187081092304 0.357219184070677 0.800363252134952 -1.00590669066818 P62191 PSMC1 P62191.T53.p_PSMC1 P62191_T53t _1_1_53_53 P62191 P62191 26S proteasome regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13123.13123.5 12.25 12.25 6.431 4 1 1 0 589.7273 2864.6383 T53t TMT10 40 (K) TKGPDAASKLPLVtPHTQCR (L) T(0.0)KGPDAAS(0.0)KLPLVT(0.99)PHT(0.0)QCR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T PSMC1 49354.8 1 1 3477.1 50.1 HUMAN 1 3.3991 -4.4707 ASKNLNLSNEETDQS-p Q86YC2;S454-p ASKNLNLSNEETDQS 0.766186662098155 0.275765059661112 0.0416666666666667 0.167333333333333 2.21904496263666 7.37299650098025 0.0416666666666667 0.167333333333333 0.599922988103336 0.183105061671024 0.556782659984563 1.52571487900847 Q86YC2 PALB2 Q86YC2.S454.p_PALB2 Q86YC2_S454s _1_1_454_454 Q86YC2 Q86YC2|H3BN63 Partner and localizer of BRCA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14931.14931.3 7.5 7.5 3.086 3 1 1 0 690.9893 1990.9879 S454s TMT10 450 (K) NLNLsNEETDQSEIR (M) NLNLS(0.99)NEET(0.0)DQS(0.0)EIR s:Phosphorylated S PALB2 133061.7 1 7 934.1 198.86 HUMAN 1 2.219 7.373 ASKNSVQSGESDSDE-p O75592;S140-p ASKNSVQSGESDSDE 0.929644395330284 0.121368762951153 -0.0173333333333333 0.182 0.628653222257624 12.0766228932736 -0.0173333333333333 0.182 0.865236193007343 0.0619922944468446 -0.177947510124899 2.34475400914971 O75592 MYCBP2 O75592.S140.p_MYCBP2 O75592_S140sS143sS145s_3_3_140_145 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20859.21065.4 14.68 14.68 2.311 5 3 3 0 979.4686 3674.9418 S140s S143s S145s TMT10 136 (K) NSVQsGEsDsDEEEESKEPPIKLPK (I) NS(0.0)VQS(0.99)GES(0.99)DS(0.99)DEEEES(0.0)KEPPIKLPK K:TMT10,s:Phosphorylated S MYCBP2 518176.7 3 32 252.1 405.77 HUMAN 1 -0.6287 12.0766 ASKRAPSSPVAKPGP-p Q9GZR2;S15-p ASKRAPSSPVAKPGP 0.501860605863968 0.00159168462790637 -0.097 -1.15166666666667 5.522601659092 44.9184819730961 -0.097 -1.15166666666667 0.280375353459123 3.22219487599134e-05 -1.19902423070667 -12.5813575667112 Q9GZR2 REXO4 Q9GZR2.S15.p_REXO4 Q9GZR2_S15s _1_1_15_15 Q9GZR2 Q9GZR2|Q9GZR2-2 RNA exonuclease 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8739.8739.4 10.61 10.61 1.401 2 1 1 0 540.3241 2078.3053 S15s TMT10 11 (K) RAPSsPVAKPGPVK (T) RAPS(0.0)S(0.99)PVAKPGPVK K:TMT10,s:Phosphorylated S REXO4 46899.2 13 1 1288.1 157.84 HUMAN 1 -5.5226 -44.9185 ASKYAALSVDGEDEN-p P23588;S597-p ASKYAALSVDGEDEN 0.924305950904693 0.132310892324601 -0.0153333333333333 0.246 0.673587479358682 11.5794311315462 -0.0153333333333333 0.246 0.856330183454392 0.0695115362564303 -0.189870227183332 2.2568717624914 P23588 EIF4B P23588.S597.p_EIF4B P23588_S597s _1_1_597_597 P23588 E7EX17|P23588|P23588-2 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20285.20488.3 16.36 16.36 1.151 3 1 1 0 795.6547 2304.9829 S597s TMT10 593 (K) YAALsVDGEDENEGEDYAE (-) Y(0.0)AALS(0.99)VDGEDENEGEDY(0.0)AE s:Phosphorylated S EIF4B 69207 9 23 146.1 516.36 HUMAN 1 -0.6736 11.5794 ASLADSYSDPGLTED-p J3KQR7;S674-p ASLADSYSDPGLTED 0.812354981418677 0.101064645361838 0.036 -0.197333333333333 1.73655655504355 13.1513658781106 0.036 -0.197333333333333 0.670415959823428 0.0484020116868797 0.44963658739763 -2.53696699874938 J3KQR7 NotFound J3KQR7.S674.p_NotFound J3KQR7_S674s _1_1_674_674 J3KQR7 J3KQR7|Q9Y4F5 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26139.26139.3 16.4 16.4 1.315 5 1 1 0 807.0392 2339.1353 S674s TMT10 666 (R) WASLADSYsDPGLTEDGLGR (R) WAS(0.0)LADS(0.0)Y(0.0)S(0.99)DPGLT(0.0)EDGLGR s:Phosphorylated S CEP170B 172326.6 4 14 51.1 746.11 HUMAN 1 1.7366 -13.1514 ASLDTRGSPKRHHFQ-p A0A140LJL2;S348-p ASLDTRGSPKRHHFQ 0.722742104433437 0.49827024673082 -0.0663333333333333 -0.083 2.66799537596015 4.04837266009873 -0.0663333333333334 -0.083 0.541003982883368 0.393697569787813 -0.652132220785086 -0.92620658002819 A0A140LJL2 NotFound A0A140LJL2.S348.p_NotFound A0A140LJL2_S348s _1_1_348_348 A0A140LJL2 A0A140LJL2|Q8N350|Q8N350-4 Voltage-dependent calcium channel beta subunit-associated regulatory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7271.7271.3 11.64 9.67 1.127 3 1 1 0 547.6331 1560.911 S348s TMT10 340 (R) AASLDTRGsPK (R) AAS(0.0)LDT(0.0)RGS(0.99)PK K:TMT10,s:Phosphorylated S CBARP 76276.7 7 2 1993.1 103.67 HUMAN 1 -2.668 -4.0484 ASLEHLKSCHSLERI-p J3KTA1;S379-p ASLEHLKSCHSLERI 0.0802188320632121 0.00230034578571823 -0.512333333333333 0.852333333333333 23.4020631974583 40.6711953845529 -0.512333333333333 0.852333333333334 0.00456871092862358 8.56801980198019e-05 -4.65012331214796 10.4374178881723 J3KTA1 NotFound J3KTA1.S379.p_NotFound J3KTA1_S379s _1_1_379_379 J3KTA1 J3KTA1|Q96IG2|Q96IG2-2 F-box and leucine-rich repeat protein 20, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4291.4291.3 7.46 7.46 7.461 2 1 1 0 399.8478 1117.5622 S379s TMT10 379 (K) sCHSLER (I) S(0.99)CHS(0.0)LER C:Carbamidomethylation,s:Phosphorylated S FBXL20 50400.3 1 2 4435.1 31.45 HUMAN 1 -23.4021 40.6712 ASLGRSQSFSHQQPS-p Q8WVR3;S517-p ASLGRSQSFSHQQPS 0.0881586637451288 0.0849603662730739 0.653 0.351 22.4855063015068 14.1711123095311 0.653 0.351 0.00564221160478028 0.0382726707282995 4.43384405127943 2.72273185288065 Q8WVR3 C7orf43 Q8WVR3.S517.p_C7orf43 Q8WVR3_S517s _1_1_517_517 Q8WVR3 Q8WVR3|B3KNS5|Q8WVR3-3|Q8WVR3-2 Uncharacterized protein C7orf43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4220.4220.2 14.13 14.13 2.129 4 1 1 0 799.3699 1517.7658 S517s TMT10 515 (R) SQsFSHQQPSR (S) S(0.0)QS(0.99)FS(0.0)HQQPS(0.0)R s:Phosphorylated S C7orf43 63337.5 2 4 2386.1 85.59 HUMAN 1 22.4855 14.1711 ASLIANQSPFRAPLN-p Q9NPI6;S373-p ASLIANQSPFRAPLN 0.635881806109566 0.0243577084773179 0.0983333333333333 -0.299333333333333 3.66693800542865 21.9821925171289 0.0983333333333333 -0.299333333333333 0.429839378339294 0.0063354978560588 0.852903878272934 -4.31330195669713 Q9NPI6 DCP1A Q9NPI6.S373.p_DCP1A Q9NPI6_S373s_1_1_373_373 Q9NPI6 Q9NPI6|Q9NPI6-2 mRNA-decapping enzyme 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.33797.33797.5 17.44 17.44 1.132 9 1 1 0 1055.9724 5193.8676 S373s N380n N383n TMT10 353 (R) SPLLNQPVPELSHASLIANQsPFRAPLnVTnTAGTSLPSVDLLQK (L) S(0.0)PLLN(0.0)QPVPELS(0.0)HAS(0.0)LIAN(0.0)QS(0.99)PFRAPLN(0.99)VT(0.0)N(0.99)T(0.0)AGT(0.0)S(0.0)LPS(0.0)VDLLQK K:TMT10,s:Phosphorylated S,n:Deamidated DCP1A 63479.5 2 8 344.1 352.95 HUMAN 1 3.6669 -21.9822 ASLKRHLTPPQGNSP-p Q8TF72;T576-p ASLKRHLTPPQGNSP 0.387041482456231 0.0796891161681751 -0.292 0.239 7.62767921469866 14.5785795506541 -0.292 0.239 0.172676039267738 0.0348451264546596 -1.570498030282 2.79801748967421 Q8TF72 SHROOM3 Q8TF72.T576.p_SHROOM3 Q8TF72_T576tS582s_2_2_576_582 Q8TF72 Q8TF72 Protein Shroom3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4020.4020.5 11.78 11.78 5.945 3 2 2 0 515.4575 2413.3213 T576t S582s TMT10 573 (K) RHLtPPQGNsPHSNERK (S) RHLT(0.99)PPQGNS(0.99)PHS(0.0)NERK K:TMT10,t:Phosphorylated T,s:Phosphorylated S SHROOM3 218451.1 1 54 90.2 622.62 HUMAN 1 -7.6277 14.5786 ASLKRVASPAAKPVV-p Q15811-4;S995-p ASLKRVASPAAKPVV 0.395891044587101 0.0791878811190425 0.245 0.517333333333333 7.42453713365385 14.61674254007 0.245 0.517333333333333 0.180944874906155 0.0345402714223931 1.53514043477476 2.80510183986674 Q15811 ITSN1 Q15811.4.S995.p_ITSN1 Q15811-4_S995s _1_1_995_995 Q15811-4 Q15811-4|F8W7U0|Q15811-3|Q15811-11|Q15811-12 Isoform 4 of Intersectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36992.36992.5 33.29 33.29 5.502 7 1 1 0 940.3237 4617.6272 S995s TMT10 993 (R) VAsPAAKPVVSGEEIAQVIASYTATGPEQLTLAPGQLILIR (K) VAS(0.99)PAAKPVVS(0.0)GEEIAQVIAS(0.0)Y(0.0)T(0.0)AT(0.0)GPEQLT(0.0)LAPGQLILIR K:TMT10,s:Phosphorylated S ITSN1 188640.6 4 11 790.2 224.94 HUMAN 1 7.4245 14.6167 ASLPGPLTPVAEGQE-p Q7Z4S6-5;T1167-p ASLPGPLTPVAEGQE 0.30137742196241 0.191592734526852 -0.148666666666667 0.186666666666667 9.77700909939605 9.43771221611963 -0.148666666666667 0.186666666666667 0.105268658877718 0.113822672493864 -1.94299407131754 1.88345043286569 Q7Z4S6 KIF21A Q7Z4S6.5.T1167.p_KIF21A Q7Z4S6-5_T1167t _1_1_1167_1167 Q7Z4S6-5 Q7Z4S6-4|Q7Z4S6-2|Q7Z4S6-5|Q7Z4S6-3|Q7Z4S6-6 Isoform 5 of Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32084.32084.5 24.24 21.93 2.09 17 1 1 0 1100.3098 5417.5573 T1167t TMT10 1137 (R) TTTQMELLYADSSELASDTSTGDASLPGPLtPVAEGQEIGMNTETSGTSAR (E) T(0.0)T(0.0)T(0.0)QMELLY(0.0)ADS(0.0)S(0.0)ELAS(0.0)DT(0.0)S(0.0)T(0.0)GDAS(0.0)LPGPLT(0.99)PVAEGQEIGMNT(0.0)ET(0.0)S(0.0)GT(0.0)S(0.0)AR t:Phosphorylated T KIF21A 184163.5 2 14 390.1 332.37 HUMAN 1 -9.777 9.4377 ASLRRSRSGSIKGSR-p Q16629;S181-p ASLRRSRSGSIKGSR 0.156450973477083 0.137311161443025 0.264 0.325333333333333 16.161022601087 11.3622722918453 0.264 0.325333333333333 0.0242045905204642 0.0730756640947773 3.09916966146218 2.21866394274144 Q16629 SRSF7 Q16629.S181.p_SRSF7 Q16629_S181sS183s_2_2_181_183 Q16629 Q16629|C9JAB2|Q16629-4 Serine/arginine-rich splicing factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4365.4365.2 8.73 2.48 5.45 3 2 2 0 590.7703 1020.5999 S181s S183s Hydrogen 181 (R) sGsIKGSR (Y) S(0.99)GS(0.99)IKGS(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S SRSF7 27594.3 6 6 2858.1 67.97 HUMAN 1 16.161 11.3623 ASLSRAFSLASADLL-p Q9P219;S1806-p ASLSRAFSLASADLL 0.779056963761954 0.0351352134094806 0.067 -0.644333333333333 2.08280014638407 19.5785221186726 0.0669999999999999 -0.644333333333333 0.619041814504823 0.0110191422137353 0.527061635476502 -3.78562738010715 Q9P219 CCDC88C Q9P219.S1806.p_CCDC88C Q9P219_S1806s _1_1_1806_1806 Q9P219 Q9P219|Q9P219-2|Q9P219-3 Protein Daple HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28113.28113.2 16.37 9.97 3.807 2 1 1 0 736.89 1392.8048 S1806s TMT10 1804 (R) AFsLASADLLR (A) AFS(0.99)LAS(0.0)ADLLR s:Phosphorylated S CCDC88C 229367.3 2 15 742.1 234.08 HUMAN 1 2.0828 -19.5785 ASLSRPKSLLVSSPS-p A7KAX9;S587-p ASLSRPKSLLVSSPS 0.0866557243462627 0.0435328037042934 -0.560666666666667 -0.384666666666667 22.7263298325484 18.2362654612476 -0.560666666666667 -0.384666666666667 0.00533785800527347 0.0150097498310404 -4.49002832043022 -3.50732065811906 A7KAX9 ARHGAP32 A7KAX9.S587.p_ARHGAP32 A7KAX9_S587s _1_1_587_587 A7KAX9 A7KAX9|A7KAX9-2|G3V174 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17301.17301.2 13.56 13.56 6.554 5 1 1 0 778.9368 1476.9038 S587s TMT10 587 (K) sLLVSSPSTK (L) S(0.99)LLVS(0.0)S(0.0)PS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S ARHGAP32 232236.5 2 2 159.1 497.4 HUMAN 1 -22.7263 -18.2363 ASLSTAPSEKGATWN-p Q9UPN4-2;S120-p ASLSTAPSEKGATWN 0.602144782379898 0.00368311161799957 0.0713333333333333 -0.658666666666667 4.0704665991952 36.1339691970617 0.0713333333333333 -0.658666666666667 0.391699791234393 0.000243558381996808 0.930575605574423 -8.52118545925278 Q9UPN4 CEP131 Q9UPN4.2.S120.p_CEP131 Q9UPN4-2_S120s _1_1_120_120 Q9UPN4-2 Q9UPN4|Q9UPN4-2|I3L2J8|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7790.7790.3 12.84 7.86 11.396 4 1 1 0 594.6562 1701.99 S120s TMT10 111 (K) RPASLSTAPsEK (G) RPAS(0.0)LS(0.0)T(0.0)APS(0.99)EK K:TMT10,s:Phosphorylated S CEP131 122301.7 2 8 359.1 345.98 HUMAN 1 4.0705 -36.134 ASLTSAASVDGNRSR-p Q9UN36;S338-p ASLTSAASVDGNRSR 0.279555400121424 0.11616595034048 0.175333333333333 0.169666666666667 10.4641754458788 12.3333832562028 0.175333333333333 0.169666666666667 0.0898633191414578 0.0584334696310865 2.06248179413867 2.39037902529182 Q9UN36 NDRG2 Q9UN36.S338.p_NDRG2 Q9UN36_S338s _1_1_338_338 Q9UN36 Q9UN36|Q9UN36-6|Q9UN36-3|Q9UN36-2|A0A0A0MS87|Q9UN36-5|Q9UN36-4|G3V578 Protein NDRG2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10089.10089.2 17.85 11.32 2.202 5 1 1 0 829.9011 1578.8285 S338s TMT10 330 (R) TASLTSAAsVDGNR (S) T(0.0)AS(0.0)LT(0.0)S(0.0)AAS(0.99)VDGNR s:Phosphorylated S NDRG2 41139.8 6 3 2649.1 75.22 HUMAN 1 10.4642 12.3334 ASLTVPLSPQVVRSK-p Q8TEV9;S498-p ASLTVPLSPQVVRSK 0.93285358140112 0.187442287541933 0.0136666666666667 0.131666666666667 0.595473442654112 9.56375693247765 0.0136666666666667 0.131666666666667 0.871871849694181 0.110566689567579 0.169083615324782 1.90527638753335 Q8TEV9 SMCR8 Q8TEV9.S498.p_SMCR8 Q8TEV9_S498s _1_1_498_498 Q8TEV9 Q8TEV9|Q8TEV9-2 Guanine nucleotide exchange protein SMCR8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21010.21010.2 15.35 15.35 2.892 5 1 1 0 1047.0451 2013.1178 S498s TMT10 487 (K) SDSQASLTVPLsPQVVR (S) S(0.0)DS(0.0)QAS(0.0)LT(0.0)VPLS(0.99)PQVVR s:Phosphorylated S SMCR8 105933.1 1 6 2079.1 98.78 HUMAN 1 0.5955 9.5638 ASMDKHPSPRTQHIQ-p P51397;S91-p ASMDKHPSPRTQHIQ 0.230507838784644 0.163552604342528 -0.2 0.311 12.2480286286152 10.3373096779166 -0.2 0.311 0.0595932590865925 0.0925271173761843 -2.37640676304674 2.03952215391395 P51397 DAP P51397.S91.p_DAP P51397_S91s _1_1_91_91 P51397 P51397 Death-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4579.4579.4 12.37 12.37 12.373 2 1 1 0 475.2435 1817.9845 S91s TMT10 82 (K) PHASMDKHPsPR (T) PHAS(0.0)MDKHPS(0.99)PR K:TMT10,s:Phosphorylated S DAP 11164.4 3 4 2099.1 97.65 HUMAN 1 -12.248 10.3373 ASMKGLGTDEDSLIE-p P07355;T123-p ASMKGLGTDEDSLIE 0.0837815603906397 0.571159824068409 0.401666666666667 0.140333333333333 23.021162587297 3.27927444476205 0.401666666666667 0.140333333333333 0.00498750956142539 0.469972618148095 4.55943197910751 0.776472131794816 P07355 ANXA2 P07355.T123.p_ANXA2 P07355_T123t _1_1_123_123 P07355 P07355-2|A6NMY6|H0YMU9 Annexin A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.34343.34343.3 19.09 19.09 2.206 3 1 1 0 696.3355 2007.0266 T123t TMT10 120 (K) GLGtDEDSLIEIICSR (T) GLGT(0.99)DEDS(0.0)LIEIICS(0.0)R C:Carbamidomethylation,t:Phosphorylated T ANXA2 38831.6 1 9 537.1 277.57 HUMAN 1 23.0212 3.2793 ASNLSGLSLQEAQQI-p P57737-3;S978-p ASNLSGLSLQEAQQI 0.386906109244301 0.084633414096391 0.129333333333333 0.228 7.63218347223728 14.1967234990376 0.129333333333333 0.228 0.17249704225304 0.0380476335481422 1.57128132199367 2.72744518667345 P57737 CORO7 P57737.3.S978.p_CORO7 P57737-3_S978s _1_1_978_978 P57737-3 P57737-3|I3L3T0|I3L0X9|I3L1U7|Q9Y3D7 Isoform 3 of Coronin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30468.30468.3 16.94 16.94 3.745 5 1 1 0 956.516 2787.5616 S978s TMT10 968 (R) SAAASNLSGLsLQEAQQILNVSK (L) S(0.0)AAAS(0.0)NLS(0.0)GLS(0.99)LQEAQQILNVS(0.0)K K:TMT10,s:Phosphorylated S CORO7 115247.5 2 4 3419.1 51.62 HUMAN 1 7.6322 14.1967 ASNPSADSPLHRGVH-p P55317;S307-p ASNPSADSPLHRGVH 0.492907411646546 0.00578267400371739 0.115 0.575 5.65946599162306 32.3586972186457 0.115 0.575 0.271677330267374 0.00058093865932722 1.22365395632823 7.17056608937598 P55317 FOXA1 P55317.S307.p_FOXA1 P55317_S307s _1_1_307_307 P55317 P55317|P55317-2 Hepatocyte nuclear factor 3-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5887.6095.3 20.56 18.22 2.153 4 1 1 0 758.7142 2194.1617 S307s TMT10 295 (R) KDPSGASNPSADsPLHR (G) KDPS(0.0)GAS(0.0)NPS(0.0)ADS(0.99)PLHR K:TMT10,s:Phosphorylated S FOXA1 49375.2 12 3 1359.1 150.2 HUMAN 1 5.6595 32.3587 ASNQQPLSGGEEKSC-p Q9NQW6;S54-p ASNQQPLSGGEEKSC 0.357290119673935 0.0148077240954323 0.136333333333333 -0.518 8.30592995595487 25.3332021329662 0.136333333333333 -0.518 0.147709015800647 0.00292873304031678 1.68819397647788 -5.12216022262466 Q9NQW6 ANLN Q9NQW6.S54.p_ANLN Q9NQW6_S54s _1_1_54_54 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13375.13375.2 16.71 14.46 3.613 3 1 1 0 1219.1052 2357.2349 S54s TMT10 42 (R) QPLSEASNQQPLsGGEEK (S) QPLS(0.0)EAS(0.0)NQQPLS(0.99)GGEEK K:TMT10,s:Phosphorylated S ANLN 125566 6 9 68.1 675.08 HUMAN 1 8.3059 -25.3332 ASNSGRRSAPPLNLT-p O75478;S361-p ASNSGRRSAPPLNLT 0.820904102287946 0.114541849195155 -0.0343333333333333 0.169 1.64880707757585 12.4114502029027 -0.0343333333333333 0.170136646242863 0.684099530304122 0.057392478434794 -0.429542483516718 2.40428593084845 O75478 TADA2A O75478.S361.p_TADA2A O75478_S361s _1_1_361_361 O75478 O75478|A0A024R0Y4 Transcriptional adapter 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25668.25668.3 20.27 18.78 10.275 3 1 1 0 678.3748 1953.1421 S361s TMT10 361 (R) sAPPLNLTGLPGTEK (L) S(0.99)APPLNLT(0.0)GLPGT(0.0)EK K:TMT10,s:Phosphorylated S TADA2A 52246.6 1 1 5343.1 20.27 HUMAN 1 -1.6488 12.4115 ASPAPDPSPRPAYKV-p Q5VTI5;S874-p ASPAPDPSPRPAYKV 0.10854647135141 0.163106886752004 0.354666666666667 0.162333333333333 20.2178069827456 10.354275947271 0.354666666666667 0.162333333333333 0.00951084933108704 0.0921663535027972 3.92585079068067 2.04247400016203 Q5VTI5 NotFound Q5VTI5.S874.p_NotFound Q5VTI5_S874s _1_1_874_874 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18910.18910.3 17.49 11.73 3.653 4 1 1 0 844.1206 2450.3808 S874s TMT10 862 (R) SLQLPASPAPDPsPRPAYK (V) S(0.0)LQLPAS(0.0)PAPDPS(0.99)PRPAY(0.0)K K:TMT10,s:Phosphorylated S PLEKHA6 119745.7 1 28 52.1 743.36 HUMAN 1 20.2178 10.3543 ASPARRASAILPGVL-p Q9BZQ8;S602-p ASPARRASAILPGVL 0.166211549723019 0.898515872628591 -0.282 0.023 15.5924178317526 0.651612262091028 -0.282 0.023 0.0275904139756093 0.8606741787129 -2.9903156971177 0.184033565132082 Q9BZQ8 FAM129A Q9BZQ8.S602.p_FAM129A Q9BZQ8_S602s _1_1_602_602 Q9BZQ8 Q9BZQ8 Protein Niban HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29623.29623.5 26.25 26.25 9.644 7 1 1 0 945.5002 4643.5023 S602s TMT10 600 (R) RAsAILPGVLGSETLSNEVFQESEEEKQPEVPSSLAK (G) RAS(0.99)AILPGVLGS(0.0)ET(0.0)LS(0.0)NEVFQES(0.0)EEEKQPEVPS(0.0)S(0.0)LAK K:TMT10,s:Phosphorylated S FAM129A 104102.7 11 2 641.1 254.96 HUMAN 1 -15.5924 0.6516 ASPCPKQSPRVAKTQ-p Q5VYV7;S286-p ASPCPKQSPRVAKTQ 0.675957670678331 0.000993050805672115 0.071 -1.19766666666667 3.18662336202701 52.3763619364629 0.071 -1.19766666666667 0.480106586252016 5.78580518515527e-06 0.758069283629434 -17.388605678858 Q5VYV7 SLX4IP Q5VYV7.S286.p_SLX4IP Q5VYV7_S286s _1_1_286_286 Q5VYV7 Q5VYV7 Protein SLX4IP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7611.7611.3 19.3 14.13 1.591 5 1 1 0 858.0641 2492.2096 S286s TMT10 271 (R) SPVCSCESASPCPKQsPR (V) S(0.0)PVCS(0.0)CES(0.0)AS(0.0)PCPKQS(0.99)PR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLX4IP 46121.3 4 2 2344.1 87.17 HUMAN 1 3.1866 -52.3764 ASPDGRTSPINEDIR-p Q9P2R6;S600-p ASPDGRTSPINEDIR 0.329632714614673 0.0689926563147461 0.183 -0.223333333333333 9.00769320879633 15.4397882712664 0.183 -0.223333333333333 0.125669729165264 0.0285772986100407 1.8096946266248 -2.95934707039501 Q9P2R6 RERE Q9P2R6.S600.p_RERE Q9P2R6_T599tS600s_2_2_599_600 Q9P2R6 Q9P2R6|B1AKN3|Q9P2R6-2 Arginine-glutamic acid dipeptide repeats protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8606.8606.5 11.64 9.06 1.658 3 2 2 0 592.111 2796.5935 T599t S600s TMT10 589 (R) KKQPASPDGRtsPINEDIR (S) KKQPAS(0.0)PDGRT(0.99)S(0.99)PINEDIR K:TMT10,t:Phosphorylated T,s:Phosphorylated S RERE 173561.6 8 12 278.1 389.04 HUMAN 1 9.0077 -15.4398 ASPDKASSPELPVSV-p Q969R5;S689-p ASPDKASSPELPVSV 0.287518273570357 0.0273987360029458 -0.173666666666667 0.322333333333333 10.2077513789645 21.1913986029298 -0.173666666666667 0.322333333333333 0.0953289615433009 0.00760081460716787 -2.01782820756752 4.13526434200831 Q969R5 L3MBTL2 Q969R5.S689.p_L3MBTL2 Q969R5_S689s _1_1_689_689 Q969R5 Q969R5 Lethal(3)malignant brain tumor-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24632.24632.2 13.09 9.55 1.13 4 1 1 0 1298.6471 2516.3132 S689s TMT10 687 (K) ASsPELPVSVENIKQETDD (-) AS(0.0)S(0.99)PELPVS(0.0)VENIKQET(0.0)DD K:TMT10,s:Phosphorylated S L3MBTL2 80135.7 5 3 2538.1 79.35 HUMAN 1 -10.2078 21.1914 ASPESKPSPGTKGQL-p A0A0J9YWL0;S489-p ASPESKPSPGTKGQL 0.534696887636567 0.00278494099914611 -0.127 -0.881333333333333 5.0352475292567 38.6861909583985 -0.127 -0.881333333333334 0.313671634566425 0.000135325893787806 -1.11051350765817 -9.55584766679499 A0A0J9YWL0 NotFound A0A0J9YWL0.S489.p_NotFound A0A0J9YWL0_S489s _1_1_489_489 A0A0J9YWL0 A0A0J9YWL0|Q9Y4K1 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14625.14625.3 11.76 11.76 11.763 5 1 1 0 922.4937 2685.5026 S489s TMT10 472 (R) AALDGGVASAASPESKPsPGTK (G) AALDGGVAS(0.0)AAS(0.0)PES(0.0)KPS(0.99)PGT(0.0)K K:TMT10,s:Phosphorylated S CRYBG1 233643.7 1 14 79.1 640.71 HUMAN 1 -5.0352 -38.6862 ASPGNPLSPSLSDKD-p Q7Z5J4;S1358-p ASPGNPLSPSLSDKD 0.484480989227411 0.3936953859546 -0.104333333333333 -0.0893333333333333 5.796790991828 5.38215949986849 -0.104333333333333 -0.0893333333333333 0.263221221890456 0.289590326137066 -1.24827769620786 -1.17339982292009 Q7Z5J4 RAI1 Q7Z5J4.S1358.p_RAI1 Q7Z5J4_S1358s _1_1_1358_1358 Q7Z5J4 Q7Z5J4|Q7Z5J4-2|A0A1W2PQJ7|Q7Z5J4-3 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18526.18526.3 15.66 15.66 4.057 4 1 1 0 711.7067 2053.133 S1358s TMT10 1348 (K) APGASPGNPLsPSLSDK (D) APGAS(0.0)PGNPLS(0.99)PS(0.0)LS(0.0)DK K:TMT10,s:Phosphorylated S RAI1 206315.3 5 20 142.1 522.21 HUMAN 1 -5.7968 -5.3822 ASPINRWSPTRRRSR-p Q13523;S437-p ASPINRWSPTRRRSR 0.959787547516884 0.375844275222463 -0.01 0.0893333333333334 0.344579481954574 5.64280897515812 -0.01 0.0893333333333334 0.923723626269891 0.272721327678175 -0.100291943072101 1.22038691162677 Q13523 PRPF4B Q13523.S437.p_PRPF4B Q13523_S437s _1_1_437_437 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10705.10705.3 11.43 11.43 1.339 3 1 1 0 570.2847 1628.8706 S437s TMT10 429 (K) DASPINRWsPTR (R) DAS(0.0)PINRWS(0.99)PT(0.0)R s:Phosphorylated S PRPF4B 117327.1 3 23 70.1 666.55 HUMAN 1 -0.3446 5.6428 ASPKHSHSPASSPKP-p Q9HDC5;S475-p ASPKHSHSPASSPKP 0.0350618685416583 0.785716254410938 -1.43933333333333 0.241666666666667 33.8888750928941 1.45303564876691 -1.43933333333333 0.241666666666666 0.000408425162687218 0.715643012361638 -7.70831336538664 0.383910530916724 Q9HDC5 JPH1 Q9HDC5.S475.p_JPH1 Q9HDC5_S475s _1_1_475_475 Q9HDC5 Q9HDC5 Junctophilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4522.4522.5 10.1 10.1 1.585 4 1 1 0 454.4626 2188.3169 S475s Hydrogen 472 (K) HSHsPASSPKPLKK (Q) HS(0.0)HS(0.99)PAS(0.0)S(0.0)PKPLKK K:TMT10-Lys-Only,s:Phosphorylated S JPH1 72141.1 3 9 675.1 247.46 HUMAN 1 -33.8889 1.453 ASPKVTRSPPETAAP-p Q9Y3L3;S550-p ASPKVTRSPPETAAP 0.194731102060832 0.231445395549268 0.198 -0.125333333333333 13.8677514392466 8.37252686276008 0.198 -0.125333333333333 0.0410416541252544 0.14546124947293 2.66866940650777 -1.69916521806011 Q9Y3L3 SH3BP1 Q9Y3L3.S550.p_SH3BP1 Q9Y3L3_S550s _1_1_550_550 Q9Y3L3 Q9Y3L3|Q6ZT62|Q6ZT62-2 SH3 domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12870.12870.3 14.37 11.36 1.151 3 1 1 0 712.6838 2056.0695 S550s TMT10 547 (K) VTRsPPETAAPVEDMAR (R) VT(0.0)RS(0.99)PPET(0.0)AAPVEDMAR s:Phosphorylated S SH3BP1 76054.2 3 3 1166.1 170.58 HUMAN 1 13.8678 -8.3725 ASPLIGRS_______-p O95067;S398-p ASPLIGRS_______ 0.820107195022017 0.0495189677885148 0.0333333333333333 -0.317333333333333 1.65979410533192 17.4584624733007 0.0333333333333333 -0.317333333333333 0.682371043903202 0.0179536912636207 0.432069621495547 -3.35084576905252 O95067 CCNB2 O95067.S398.p_CCNB2 O95067_S398s _1_1_398_398 O95067 O95067|H0YMP3 G2/mitotic-specific cyclin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18689.18689.2 13.46 13.46 13.459 2 1 1 0 669.3535 1257.7364 S398s TMT10 389 (K) DLASPLIGRs (-) DLAS(0.0)PLIGRS(0.99) s:Phosphorylated S CCNB2 45566 2 2 2741.1 72.14 HUMAN 1 1.6598 -17.4585 ASPLSSDSPVKTPIK-p Q9Y426;S441-p ASPLSSDSPVKTPIK 0.0726226250911071 0.00123467326444358 -0.48 -1.00633333333333 24.4922404406314 47.7027658459203 -0.48 -1.00633333333333 0.00355447902613876 1.6971624540812e-05 -4.91631576497294 -14.2044734123315 Q9Y426 C2CD2 Q9Y426.S441.p_C2CD2 Q9Y426_S441s _1_1_441_441 Q9Y426 Q9Y426|Q9Y426-3|Q9Y426-2 C2 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13069.13069.3 13.7 13.7 2.15 4 1 1 0 542.6245 1545.8888 S441s TMT10 434 (R) ASPLSSDsPVK (T) AS(0.0)PLS(0.0)S(0.0)DS(0.99)PVK K:TMT10,s:Phosphorylated S C2CD2 76045.3 7 2 1354.1 150.76 HUMAN 1 -24.4922 -47.7028 ASPPEPQSPELPPAL-p Q66K64;S288-p ASPPEPQSPELPPAL 0.505331441375725 0.431053879775285 0.102 -0.134333333333333 5.47289838297347 4.86944829173816 0.102 -0.134333333333333 0.283602569743451 0.325878096466679 1.19005675465217 -1.07986518592215 Q66K64 DCAF15 Q66K64.S288.p_DCAF15 Q66K64_S282sS288s_2_2_282_288 Q66K64 Q66K64 DDB1- and CUL4-associated factor 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34160.34160.5 14.21 14.21 5.241 7 2 2 0 999.2639 4832.336 S282s S288s TMT10 265 (R) SFCQILYDHSTCPLAPAsPPEPQsPELPPALPSFCPEAAPAR (S) S(0.0)FCQILY(0.0)DHS(0.0)T(0.0)CPLAPAS(0.99)PPEPQS(0.99)PELPPALPS(0.0)FCPEAAPAR C:Carbamidomethylation,s:Phosphorylated S DCAF15 67432.2 1 4 3179.1 58.55 HUMAN 1 5.4729 -4.8694 ASPPGAASDAEPGDE-p P10588;S40-p ASPPGAASDAEPGDE 0.968236063788531 0.0626241760459079 0.00733333333333333 -0.3 0.273781889766781 16.0172243952988 0.00733333333333333 -0.3 0.938905344146468 0.0250194385967254 0.0802730794463492 -3.06932657791985 P10588 NR2F6 P10588.S40.p_NR2F6 P10588_S40s _1_1_40_40 P10588 P10588 Nuclear receptor subfamily 2 group F member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18338.18338.5 18.65 18.65 2.667 3 1 1 0 842.7789 4129.8967 S40s TMT10 27 (R) AAEDDSASPPGAAsDAEPGDEERPGLQVDCVVCGDK (S) AAEDDS(0.0)AS(0.0)PPGAAS(0.99)DAEPGDEERPGLQVDCVVCGDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NR2F6 43662.9 1 1 3618.1 46.82 HUMAN 1 0.2738 -16.0172 ASPPQNNSGSSSPVF-p Q9P1Y5;S347-p ASPPQNNSGSSSPVF 0.165508744771627 0.0200678473676497 0.227333333333333 0.371 15.6263183735742 23.2603275503472 0.227333333333333 0.371 0.0273758846732365 0.00472027439019336 2.99676389173622 4.61099967807423 Q9P1Y5 CAMSAP3 Q9P1Y5.S347.p_CAMSAP3 Q9P1Y5_S347s _1_1_347_347 Q9P1Y5 Q9P1Y5|Q9P1Y5-2 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18953.18953.3 15.03 15.03 2.253 7 1 1 0 826.0504 2396.168 S347s TMT10 337 (R) GTEASPPQNNsGSSSPVFTFR (H) GT(0.0)EAS(0.0)PPQNNS(0.99)GS(0.0)S(0.0)S(0.0)PVFT(0.0)FR s:Phosphorylated S CAMSAP3 135546 8 5 217.1 432.4 HUMAN 1 15.6263 23.2603 ASPPRVPSPPPAPEP-p O15037;S359-p ASPPRVPSPPPAPEP 0.325306077824017 0.239132002688733 -0.142666666666667 0.114333333333333 9.13339350942513 8.18657316372518 -0.142666666666667 0.114333333333333 0.122084533783905 0.151824788090196 -1.83145650401674 1.66697004191814 O15037 KHNYN O15037.S359.p_KHNYN O15037_S353sS359s_2_2_353_359 O15037 O15037 Protein KHNYN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16430.16430.4 8.39 8.39 99 2 2 2 0 832.8803 3168.5747 S353s S359s TMT10 347 (R) LHNGNAsPPRVPsPPPAPEPPWHCGDR (G) LHNGNAS(1.0)PPRVPS(1.0)PPPAPEPPWHCGDR C:Carbamidomethylation,s:Phosphorylated S KHNYN 75274.3 2 2 5049.1 23.52 HUMAN 1 -9.1334 8.1866 ASPPSFPSGSPVLRL-p Q9C073;S199-p ASPPSFPSGSPVLRL 0.491261982575074 0.0367914553665712 -0.096 -0.259 5.68311011219885 19.2934485793989 -0.096 -0.258608053019703 0.270202267213604 0.0117667124929086 -1.22789976925392 -3.72560066071587 Q9C073 FAM117A Q9C073.S199.p_FAM117A Q9C073_S199s _1_1_199_199 Q9C073 Q9C073 Protein FAM117A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21012.21012.4 11.64 11.64 1.137 5 1 1 0 643.5833 2491.3441 S199s TMT10 192 (R) ASPPSFPsGSPVLRLSPCLHR (S) AS(0.0)PPS(0.0)FPS(0.99)GS(0.0)PVLRLS(0.0)PCLHR C:Carbamidomethylation,s:Phosphorylated S FAM117A 49059.4 3 7 640.1 255.25 HUMAN 1 -5.6831 -19.2934 ASPQRSPSPLSGHVA-p Q6P0Q8;S1364-p ASPQRSPSPLSGHVA 0.149214344489706 0.594717817142871 0.280333333333333 0.0593333333333333 16.6594148995733 3.05568504580732 0.280333333333333 0.0593333333333333 0.0215803512945316 0.494802055862511 3.19585135275497 0.731596258911491 Q6P0Q8 MAST2 Q6P0Q8.S1364.p_MAST2 Q6P0Q8_S1364s _1_1_1364_1364 Q6P0Q8 Q6P0Q8 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17490.17490.3 12.62 12.62 1.133 4 1 1 0 721.3848 2082.1748 S1364s TMT10 1362 (R) SPsPLSGHVAQAFPTK (L) S(0.0)PS(0.99)PLS(0.0)GHVAQAFPT(0.0)K K:TMT10,s:Phosphorylated S MAST2 197687.5 2 58 121.1 549.41 HUMAN 1 16.6594 3.0557 ASPSAPQSPSYQIQQ-p Q96L91;S53-p ASPSAPQSPSYQIQQ 0.484480989227411 0.432579141373597 0.103333333333333 0.0776666666666667 5.79695459126724 4.84956817755793 0.103333333333333 0.0776666666666667 0.263211306490881 0.327373244241494 1.24830698036518 1.07620521886621 Q96L91 EP400 Q96L91.S53.p_EP400 Q96L91_S53s _1_1_53_53 Q96L91 Q96L91|Q96L91-2|Q96L91-5|Q96L91-3|Q96L91-4|A0A0A0MR80 E1A-binding protein p400 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24402.24402.4 29.55 29.55 1.107 8 1 1 0 1273.0885 5009.3784 S53s TMT10 19 (R) ACPGSEGEEQPAHPNPPPSPAAPFAPSASPSAPQsPSYQIQQLMNR (S) ACPGS(0.0)EGEEQPAHPNPPPS(0.0)PAAPFAPS(0.0)AS(0.0)PS(0.0)APQS(0.99)PS(0.0)Y(0.0)QIQQLMNR C:Carbamidomethylation,s:Phosphorylated S EP400 344909.2 7 5 91.1 620.97 HUMAN 1 5.797 4.8496 ASPSGDASPPATAPY-p Q9UPT8;S1114-p ASPSGDASPPATAPY 0.822004837548017 0.159956193473834 0.042 0.152 1.63854240544048 10.4691589302012 0.042 0.152 0.685718331057109 0.0897602610512786 0.427178558846861 2.0624719632203 Q9UPT8 ZC3H4 Q9UPT8.S1114.p_ZC3H4 Q9UPT8_S1114s _1_1_1114_1114 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13681.13681.4 21.62 21.5 1.601 7 1 1 0 868.1793 3389.7378 S1114s TMT10 1094 (R) AAKPGPAEAPSPTASPSGDAsPPATAPYDPR (V) AAKPGPAEAPS(0.0)PT(0.0)AS(0.0)PS(0.0)GDAS(0.99)PPAT(0.0)APY(0.0)DPR K:TMT10,s:Phosphorylated S ZC3H4 140881.7 5 6 427.1 318.7 HUMAN 1 1.6385 10.4692 ASPSPKGTPEKANEP-p Q9H4G0-4;T507-p ASPSPKGTPEKANEP 0.57602742215752 0.00272422972588299 0.086 -1.556 4.40622660479291 38.9537793477461 0.086 -1.556 0.362557872318353 0.000127239532634773 0.99402644184264 -9.67059935089282 Q9H4G0 EPB41L1 Q9H4G0.4.T507.p_EPB41L1 Q9H4G0-4_S503sT507t_2_2_503_507 Q9H4G0-4 Q9H4G0-4 Isoform 4 of Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12184.12184.5 10.77 8.67 2.585 5 2 2 0 690.9771 3290.9242 S503s T507t TMT10 494 (R) RLPSSPASPsPKGtPEKANEPVK (T) RLPS(0.0)S(0.0)PAS(0.0)PS(0.99)PKGT(0.99)PEKANEPVK K:TMT10,s:Phosphorylated S,t:Phosphorylated T EPB41L1 79286.2 3 35 174.4 483.37 HUMAN 1 4.4062 -38.9538 ASPSPKGTPEKANER-p Q9H4G0;T550-p ASPSPKGTPEKANER 0.183772533717644 0.0159232555438984 -0.437666666666667 -0.432666666666667 14.4709944493736 24.8432318680605 -0.437666666666667 -0.432666666666667 0.035719103902926 0.00327851226863396 -2.77981194935723 -4.99799429328451 Q9H4G0 EPB41L1 Q9H4G0.T550.p_EPB41L1 Q9H4G0_T550t _1_1_550_550 Q9H4G0 Q9H4G0|A0A0C4DH22|Q9H4G0-2 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9648.9648.5 15.24 13.59 2.511 5 1 1 0 501.4843 2423.4225 T550t TMT10 537 (R) RLPSSPASPSPKGtPEK (A) RLPS(0.0)S(0.0)PAS(0.0)PS(0.0)PKGT(0.99)PEK K:TMT10,t:Phosphorylated T EPB41L1 99071.6 1 14 174.1 483.37 HUMAN 1 -14.471 -24.8432 ASPSRDVSPMGLKIT-p Q9UBN1;S259-p ASPSRDVSPMGLKIT 0.143638422086766 0.00265487479708047 0.258666666666667 0.711666666666667 17.2198348301521 39.1648502510869 0.258666666666667 0.711666666666667 0.0189677805765286 0.000121203448016866 3.30605933870361 9.76199289966819 Q9UBN1 CACNG4 Q9UBN1.S259.p_CACNG4 Q9UBN1_S259s _1_1_259_259 Q9UBN1 Q9UBN1 Voltage-dependent calcium channel gamma-4 subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12881.12881.3 14.86 9.8 3.562 5 1 1 0 734.0402 2120.1422 S259s TMT10 249 (R) STEASPSRDVsPMGLK (I) S(0.0)T(0.0)EAS(0.0)PS(0.0)RDVS(0.99)PMGLK K:TMT10,s:Phosphorylated S CACNG4 36920.5 4 2 3736.1 44.24 HUMAN 1 17.2198 39.1649 ASPSRTRSPDVISSA-p Q6P2E9;S729-p ASPSRTRSPDVISSA 0.258498864780723 0.140989165276238 0.172 0.164333333333333 11.1652276090205 11.210612582679 0.172 0.164333333333333 0.0764675611570474 0.075672614947257 2.18508143173178 2.19203855295738 Q6P2E9 EDC4 Q6P2E9.S729.p_EDC4 Q6P2E9_S729s _1_1_729_729 Q6P2E9 Q6P2E9|Q6P2E9-2 Enhancer of mRNA-decapping protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36589.36589.3 25.99 21.21 5.324 8 1 1 0 985.1624 2873.4941 S729s TMT10 729 (R) sPDVISSASTALSQDIPEIASEALSR (G) S(0.99)PDVIS(0.0)S(0.0)AS(0.0)T(0.0)ALS(0.0)QDIPEIAS(0.0)EALS(0.0)R s:Phosphorylated S EDC4 153084.9 30 12 177.1 481.34 HUMAN 1 11.1652 11.2106 ASPTPLASPGKALPE-p A0A1B0GTL5;S640-p ASPTPLASPGKALPE 0.723881735534663 0.00377183674542825 -0.055 -0.597 2.65584470140009 35.9409462192004 -0.055 -0.597 0.542519721151582 0.000254627542233032 -0.649599588971497 -8.44714332976567 A0A1B0GTL5 NotFound A0A1B0GTL5.S640.p_NotFound A0A1B0GTL5_S640s _1_1_640_640 A0A1B0GTL5 A0A1B0GTL5 Rab11 family-interacting protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12584.12584.2 13.51 13.51 2.865 3 1 1 0 782.4302 1483.8885 S640s TMT10 633 (R) ASPTPLAsPGK (A) AS(0.0)PT(0.0)PLAS(0.99)PGK K:TMT10,s:Phosphorylated S RAB11FIP5 139038.8 3 13 714.1 238.09 HUMAN 1 -2.6558 -35.9409 ASPTRDRSPPKSPEK-p Q9UQ35;S404-p ASPTRDRSPPKSPEK 0.0482466396076474 0.0979329136426181 -0.507 0.262333333333333 29.1668345927403 13.3412295692323 -0.507 0.262333333333333 0.00121148081411225 0.0463315727782797 -6.18258220721023 2.57128506132794 Q9UQ35 SRRM2 Q9UQ35.S404.p_SRRM2 Q9UQ35_S404s _1_1_404_404 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9416.9416.5 10.25 10.25 1.133 10 1 1 0 746.7911 3649.964 S404s Hydrogen 402 (R) DRsPPKSPEKLPQSSSSESSPPSPQPTK (V) DRS(0.99)PPKS(0.0)PEKLPQS(0.0)S(0.0)S(0.0)S(0.0)ES(0.0)S(0.0)PPS(0.0)PQPT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 4 13 2.1 3310.34 HUMAN 1 -29.1668 13.3412 ASQAKPESQPRAAEK-p Q969E4;S92-p ASQAKPESQPRAAEK 0.134150744259901 0.0118067483693142 0.366333333333333 0.633333333333333 17.9501462568065 26.9444668044579 0.366333333333333 0.633333333333334 0.0160319139930579 0.00202093953318862 3.452182890909 5.5460810802344 Q969E4 TCEAL3 Q969E4.S92.p_TCEAL3 Q969E4_S92s _1_1_92_92 Q969E4 Q969E4 Transcription elongation factor A protein-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5868.5868.4 13.15 13.15 7.657 3 1 1 0 869.7134 3395.8689 S92s TMT10 72 (R) SEGEGKPQGEGKPASQAKPEsQPR (A) S(0.0)EGEGKPQGEGKPAS(0.0)QAKPES(0.99)QPR K:TMT10,s:Phosphorylated S TCEAL3 22616 1 4 943.1 197.95 HUMAN 1 17.9501 26.9445 ASQDPEHSLTEYIHH-p O95613;S3302-p ASQDPEHSLTEYIHH 0.293955747591478 0.0432441478414521 0.192 -0.315 10.031659207797 18.2746041636002 0.192 -0.315 0.0992736704166293 0.0148778297143154 1.98721128969781 -3.51512135793831 O95613 PCNT O95613.S3302.p_PCNT O95613_S3302s _1_1_3302_3302 O95613 O95613|O95613-2 Pericentrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23902.23902.5 11.52 11.52 1.175 6 1 1 0 648.9222 3160.6225 S3302s TMT10 3292 (R) SLTASQDPEHsLTEYIHHLEVIQQR (L) S(0.0)LT(0.0)AS(0.0)QDPEHS(0.99)LT(0.0)EY(0.0)IHHLEVIQQR s:Phosphorylated S PCNT 380826.2 2 21 222.1 428 HUMAN 1 10.0317 -18.2746 ASQEHHLSEETKCSA-p P38398;S1286-p ASQEHHLSEETKCSA 0.277199809541827 0.0496915219721712 -0.163666666666667 -0.289 10.5416527444938 17.43700866963 -0.163666666666667 -0.289 0.0882743900808755 0.0180426004989544 -2.07599160521829 -3.34657684798006 P38398 BRCA1 P38398.S1286.p_BRCA1 P38398_S1280sS1286s_2_2_1280_1286 P38398 P38398-7|P38398-4|P38398-8|Q5YLB2 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16661.16661.4 12.48 12.48 2.404 5 2 2 0 950.7114 3639.9004 S1280s S1286s TMT10 1265 (K) NSLNDCSNQVILAKAsQEHHLsEETK (C) NS(0.0)LNDCS(0.0)NQVILAKAS(0.99)QEHHLS(0.99)EET(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRCA1 210227.6 1 27 106.1 588.91 HUMAN 1 -10.5417 -17.437 ASQEIPASPFRVKVD-p O75369-8;S833-p ASQEIPASPFRVKVD 0.849932017970877 0.462183253814885 0.035 -0.0776666666666667 1.36680192056526 4.47016050472839 0.035 -0.0776666666666667 0.729994869653058 0.357259634456601 0.363514409342421 -1.00581475354885 O75369 FLNB O75369.8.S833.p_FLNB O75369-8_S833s _1_1_833_833 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|O75369-4|O75369-5 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28410.28410.3 18.05 18.05 5.756 2 1 1 0 624.3271 1791.0002 S833s TMT10 823 (K) VLFASQEIPAsPFR (V) VLFAS(0.0)QEIPAS(0.99)PFR s:Phosphorylated S FLNB 283797.6 5 14 67.1 680.07 HUMAN 1 1.3668 -4.4702 ASQLKGFSLLATEDK-p P09874;S185-p ASQLKGFSLLATEDK 0.880906925284752 0.857613370752798 0.0293333333333333 -0.0186666666666666 1.08424726601711 0.938933533153603 0.0293333333333333 -0.0186666666666667 0.779067833541838 0.805576236683233 0.294879478760899 -0.258464361344506 P09874 PARP1 P09874.S185.p_PARP1 P09874_S185s _1_1_185_185 P09874 P09874 Poly [ADP-ribose] polymerase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24742.24742.2 9.97 6.76 2.307 2 1 1 0 809.9274 1538.883 S185s TMT10 183 (K) GFsLLATEDK (E) GFS(0.99)LLAT(0.0)EDK K:TMT10,s:Phosphorylated S PARP1 113880.5 1 2 1179.1 169.18 HUMAN 1 1.0842 -0.9389 ASQSRPNSSALETLG-p O94804;S454-p ASQSRPNSSALETLG 0.2040437776167 0.148363906232331 -0.264666666666667 -0.188666666666667 13.3681529302388 10.9110963685629 -0.264666666666667 -0.188666666666667 0.0460452363958924 0.0810756358041006 -2.57762258458069 -2.13958570380472 O94804 STK10 O94804.S454.p_STK10 O94804_S454s _1_1_454_454 O94804 O94804 Serine/threonine-protein kinase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13233.13233.2 12.74 12.74 1.129 5 1 1 0 1185.6102 2290.2403 S454s TMT10 447 (K) ASQSRPNsSALETLGGEK (L) AS(0.0)QS(0.0)RPNS(0.99)S(0.0)ALET(0.0)LGGEK K:TMT10,s:Phosphorylated S STK10 112818 9 7 728.1 236.53 HUMAN 1 -13.3682 -10.9111 ASRASAVSELSPRER-p Q9Y2W1;S240-p ASRASAVSELSPRER 0.237912707669171 0.0282240774854388 0.192 0.688666666666667 11.9396969293231 20.9952727297963 0.192 0.688666666666667 0.063977948068146 0.00795193327131469 2.32164306111591 4.09180301653072 Q9Y2W1 THRAP3 Q9Y2W1.S240.p_THRAP3 Q9Y2W1_S240s _1_1_240_240 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12902.12902.2 11.08 7.05 2.796 3 1 1 0 663.3372 1245.7 S240s TMT10 236 (R) ASAVsELSPR (E) AS(0.0)AVS(0.99)ELS(0.0)PR s:Phosphorylated S THRAP3 108720.9 3 58 10.2 1293.04 HUMAN 1 11.9397 20.9953 ASRASSRSPVFTPRV-p P52735-3;S771-p ASRASSRSPVFTPRV 0.466667919827382 0.0736827252619868 0.0983333333333333 0.218666666666667 6.11045309452767 15.0370670024195 0.0983333333333334 0.218666666666667 0.244880774717088 0.0313540249616636 1.30421607813675 2.8835186923003 P52735 VAV2 P52735.3.S771.p_VAV2 P52735-3_S771s _1_1_771_771 P52735-3 P52735-3 Isoform 3 of Guanine nucleotide exchange factor VAV2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7268.7476.3 12.36 7.67 2.791 4 1 1 0 505.2631 1433.8062 S771s TMT10 767 (R) ASSRsPVFTPR (V) AS(0.0)S(0.0)RS(0.99)PVFT(0.0)PR s:Phosphorylated S VAV2 98228.6 6 5 2598.1 77.13 HUMAN 1 6.1105 15.0371 ASRATTLSNAVSSLA-p Q13492;S303-p ASRATTLSNAVSSLA 0.261514139789786 0.0609902697058409 -0.233333333333333 -0.339666666666667 11.0391623522228 16.18121517445 -0.233333333333333 -0.339666666666667 0.0787197606208102 0.024092312212152 -2.16297167874388 -3.10084138870337 Q13492 PICALM Q13492.S303.p_PICALM Q13492_S303s _1_1_303_303 Q13492 Q13492|Q13492-5|Q13492-2|Q13492-3|Q13492-4 Phosphatidylinositol-binding clathrin assembly protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37130.37130.3 17.56 17.56 2.198 9 1 1 0 820.7849 2380.3699 S303s TMT10 299 (R) ATTLsNAVSSLASTGLSLTK (V) AT(0.0)T(0.0)LS(0.99)NAVS(0.0)S(0.0)LAS(0.0)T(0.0)GLS(0.0)LT(0.0)K K:TMT10,s:Phosphorylated S PICALM 70924.4 3 1 2544.1 79.1 HUMAN 1 -11.0392 -16.1812 ASRGERHSAYNEWKK-p O00481;S327-p ASRGERHSAYNEWKK 0.548579795198745 0.551645889717915 -0.198666666666667 0.0673333333333334 4.81166092026932 3.47884122229947 -0.198666666666667 0.0673333333333334 0.330243218327853 0.448865139446696 -1.06942821816296 0.8159742740213 O00481 BTN3A1 O00481.S327.p_BTN3A1 O00481_S327s _1_1_327_327 O00481 O00481|O00481-4 Butyrophilin subfamily 3 member A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7403.7403.4 12.73 12.73 12.725 2 1 1 0 568.8023 2192.2179 S327s TMT10 323 (R) GERHsAYNEWKK (A) GERHS(0.99)AY(0.0)NEWKK K:TMT10,s:Phosphorylated S BTN3A1 58189.6 1 1 6266.1 12.73 HUMAN 1 -4.8117 3.4788 ASRIPAASAAAMNLA-p Q9UQ35;S2236-p ASRIPAASAAAMNLA 0.871909504018111 0.0243599480912376 -0.0296666666666667 0.534666666666667 1.16571528008012 21.9810983999183 -0.0296666666666667 0.534666666666667 0.764589750652367 0.00633709415782289 -0.31494493824767 4.31305246639075 Q9UQ35 SRRM2 Q9UQ35.S2236.p_SRRM2 Q9UQ35_S2236s _1_1_2236_2236 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21837.21837.3 16.31 14.3 9.214 2 1 1 0 575.2982 1643.91 S2236s TMT10 2232 (R) IPAAsAAAMNLASAR (T) IPAAS(0.99)AAAMNLAS(0.0)AR s:Phosphorylated S SRRM2 300351.7 4 142 2.1 3310.34 HUMAN 1 -1.1657 21.9811 ASRISNPSDDNSCED-p Q9NV79;S306-p ASRISNPSDDNSCED 0.265368066946808 0.00117984223282173 -0.356 1.14466666666667 10.9275154977826 48.3711791161969 -0.356 1.14466666666667 0.0807696963588706 1.45506397484175e-05 -2.1434154299611 14.6227971095173 Q9NV79 PCMTD2 Q9NV79.S306.p_PCMTD2 Q9NV79_S306sS310s_2_2_306_310 Q9NV79 Q9NV79|Q9NV79-2|A0A0G2JM70|V9GZ41|Q9NV79-3 Protein-L-isoaspartate O-methyltransferase domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11247.11247.4 13.18 13.18 2.488 3 2 2 0 857.613 3267.4959 S306s S310s TMT10 302 (R) ISNPsDDNsCEDLEEERREEEEK (T) IS(0.0)NPS(0.99)DDNS(0.99)CEDLEEERREEEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCMTD2 41470.5 1 2 5130.1 22.57 HUMAN 1 -10.9275 48.3712 ASRKAKRSIEEACLT-p E9PGC8;S393-p ASRKAKRSIEEACLT 0.284862647210282 0.125239556155038 0.164 -0.166666666666667 10.2924256865618 11.8967757638944 0.164 -0.166666666666667 0.0934883363243799 0.0646133745746391 2.03256374449175 -2.3128964092138 E9PGC8 NotFound E9PGC8.S393.p_NotFound E9PGC8_S393s _1_1_393_393 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19263.19263.3 13.07 13.07 13.068 2 1 1 0 664.9987 1913.0112 S393s TMT10 393 (R) sIEEACLTLQHLNR (L) S(0.99)IEEACLT(0.0)LQHLNR C:Carbamidomethylation,s:Phosphorylated S MAP1A 332906.7 1 3 20.1 1016.98 HUMAN 1 10.2924 -11.8968 ASRLAAKSPIRETMK-p Q9HC77;S540-p ASRLAAKSPIRETMK 0.0659834513669106 0.00142711858189611 -0.442 -1.027 25.4432154777441 46.0718230585126 -0.442 -1.027 0.00285547559177709 2.4706867954088e-05 -5.15691260349274 -13.2311119087733 Q9HC77 CENPJ Q9HC77.S540.p_CENPJ Q9HC77_S540s _1_1_540_540 Q9HC77 Q9HC77|F6VUX8|Q9HC77-2 Centromere protein J HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13327.13327.4 9.6 9.6 9.597 2 1 1 0 528.8107 2032.2556 S540s TMT10 536 (R) LAAKsPIRETMK (E) LAAKS(0.99)PIRET(0.0)MK K:TMT10,s:Phosphorylated S CENPJ 154195.7 1 5 1877.1 109.56 HUMAN 1 -25.4432 -46.0718 ASRMRAGTRNIYYLC-p Q12931;T494-p ASRMRAGTRNIYYLC 0.345159407933098 0.438784249478684 0.156333333333333 0.078 8.58332905174391 4.7676553550199 0.156333333333333 0.078 0.138569322891916 0.333606469766808 1.73623449606922 1.0610963893501 Q12931 TRAP1 Q12931.T494.p_TRAP1 Q12931_T494t _1_1_494_494 Q12931 Q12931|Q12931-2|I3L0K7 Heat shock protein 75 kDa, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13434.13434.3 14.8 14.8 11.156 3 1 1 0 659.9907 1897.9904 T494t TMT10 492 (R) AGtRNIYYLCAPNR (H) AGT(0.99)RNIY(0.0)Y(0.0)LCAPNR C:Carbamidomethylation,t:Phosphorylated T TRAP1 80393.8 2 50 43.4 810.87 HUMAN 1 8.5833 4.7677 ASRNSPASPLKELSG-p O43572;S281-p ASRNSPASPLKELSG 0.627614753378983 0.00172752646433129 -0.089 -0.861666666666667 3.75949370841178 43.706218313915 -0.089 -0.861666666666667 0.420775678689802 4.25969170904532e-05 -0.870868083870667 -11.9308995370634 O43572 AKAP10 O43572.S281.p_AKAP10 O43572_S281s _1_1_281_281 O43572 O43572|E7EMD6 A-kinase anchor protein 10, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10213.10213.3 9.45 9.45 9.451 2 1 1 0 451.2511 1271.7724 S281s TMT10 277 (R) NSPAsPLK (E) NS(0.0)PAS(0.99)PLK K:TMT10,s:Phosphorylated S AKAP10 74273.3 2 8 1844.1 111.39 HUMAN 1 -3.7595 -43.7062 ASRTQQFSPTGKYKA-p Q4G0A6;S524-p ASRTQQFSPTGKYKA 0.233628206047255 0.559030464172909 -0.249666666666667 -0.0623333333333333 12.1150702436133 3.40478260727438 -0.249666666666667 -0.0623333333333333 0.0614459093247461 0.456585104693901 -2.35276158807174 -0.801373021564415 Q4G0A6 FAM188B Q4G0A6.S524.p_FAM188B Q4G0A6_S524s _1_1_524_524 Q4G0A6 Q4G0A6 Probable ubiquitin carboxyl-terminal hydrolase MINDY-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10475.10475.3 7.94 7.94 7.94 3 1 1 0 511.269 1451.8259 S524s TMT10 520 (R) TQQFsPTGK (Y) T(0.0)QQFS(0.99)PT(0.0)GK K:TMT10,s:Phosphorylated S MINDY4 85283.1 1 4 2508.1 80.6 HUMAN 1 -12.1151 -3.4048 ASRYAALSDQGLDIK-p Q8WX93;S1352-p ASRYAALSDQGLDIK 0.81089476501821 0.61497197853983 0.0376666666666667 -0.061 1.74875179082258 2.86852762219693 0.0376666666666667 -0.061 0.668536034425175 0.516591478313746 0.452413304293585 -0.693484973704849 Q8WX93 PALLD Q8WX93.S1352.p_PALLD Q8WX93_S1352s _1_1_1352_1352 Q8WX93 Q8WX93|Q8WX93-5|Q8WX93-3|Q8WX93-8|Q8WX93-4 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21748.21748.2 14.37 11.82 10.045 2 1 1 0 916.4885 1751.9944 S1352s TMT10 1348 (R) YAALsDQGLDIK (A) Y(0.0)AALS(0.99)DQGLDIK K:TMT10,s:Phosphorylated S PALLD 151930.4 2 15 338.1 354.43 HUMAN 1 1.7488 -2.8685 ASSALGFSKSSSPSA-p O96028-3;S614-p ASSALGFSKSSSPSA 0.095910076009562 0.130564668304362 0.461666666666667 0.183666666666667 21.5939626292423 11.65293042405 0.461666666666667 0.183666666666667 0.00692793392690961 0.0683450330083248 4.22969139748907 2.26982684667089 O96028 WHSC1 O96028.3.S614.p_WHSC1 O96028-3_S614s _1_1_614_614 O96028-3 O96028|O96028-3 Isoform 3 of Histone-lysine N-methyltransferase NSD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17723.17723.3 16.15 12.93 4.061 5 1 1 0 579.307 1655.9369 S614s TMT10 603 (R) ASTAASSALGFsK (S) AS(0.0)T(0.0)AAS(0.0)S(0.0)ALGFS(0.99)K K:TMT10,s:Phosphorylated S NSD2 72093.4 1 13 410.1 322.95 HUMAN 1 21.594 11.6529 ASSALRKSPMMPENA-p Q9UNN5;S320-p ASSALRKSPMMPENA 0.384110837361105 0.0144832167858916 0.152666666666667 0.387333333333333 7.69350911544411 25.4878296458937 0.152666666666667 0.387333333333333 0.170078371353176 0.00282629204030501 1.58194312779771 5.1617925435776 Q9UNN5 FAF1 Q9UNN5.S320.p_FAF1 Q9UNN5_S320s _1_1_320_320 Q9UNN5 Q9UNN5|B3KT28 FAS-associated factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.35972.35972.3 26.18 26.18 26.176 4 1 1 0 1027.4593 3000.3917 S320s TMT10 320 (K) sPMMPENAENEGDALLQFTAEFSSR (Y) S(0.99)PMMPENAENEGDALLQFT(0.0)AEFS(0.0)S(0.0)R s:Phosphorylated S FAF1 74409.3 3 3 2863.1 67.89 HUMAN 1 7.6935 25.4878 ASSANLGSGCEEKRH-p U3KQ54;S11-p ASSANLGSGCEEKRH 0.619956161074258 0.533073814879824 0.157333333333333 0.0843333333333334 3.85967864352354 3.67402063830416 0.157333333333333 0.0843333333333334 0.411180145279736 0.429138951892934 0.890210226286058 0.854145649543077 U3KQ54 PMF1-BGLAP U3KQ54.S11.p_PMF1-BGLAP U3KQ54_S11s _1_1_11_11 U3KQ54 Q6P1K2-5|U3KQ54|Q6P1K2-2|Q6P1K2-6|Q6P1K2-3|A0A087WT04|V9GYI0 HCG2044777 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10935.10935.2 16.34 16.34 2.219 3 1 1 0 930.8954 1780.8221 S11s Acetyl 2 (M) AEASSANLGsGCEEK (R) AEAS(0.0)S(0.0)ANLGS(0.99)GCEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PMF1-BGLAP 23996.7 2 1 4620.1 28.69 HUMAN 1 3.8597 3.674 ASSENSSSTPEECEE-p O00567;S467-p ASSENSSSTPEECEE 0.814399806622497 0.0506792864412714 0.033 0.232 1.7120109182481 17.3028892675261 0.033 0.232 0.674215772582494 0.0186084874223371 0.444036165853882 3.31994525271198 O00567 NOP56 O00567.S467.p_NOP56 O00567_S467sT468t_2_2_467_468 O00567 O00567 Nucleolar protein 56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19460.19460.4 13.9 13.9 1.184 7 2 2 0 979.4691 3738.9133 S467s T468t M475m TMT10 453 (K) RLAALALASSENSSstPEECEEmSEKPK (K) RLAALALAS(0.0)S(0.0)ENS(0.0)S(0.0)S(0.99)T(0.99)PEECEEM(1.0)S(0.0)EKPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T,m:Oxidized methionine NOP56 66448.1 23 13 262.1 396.77 HUMAN 1 1.712 17.3029 ASSFEGRSVPATPVL-p Q96HB5-4;S337-p ASSFEGRSVPATPVL 0.250463232223352 0.0588887441163737 0.439 0.325666666666667 11.4758776148796 16.3859317652278 0.439 0.325666666666667 0.0711888928162948 0.0229830056316681 2.23969959495652 3.14036278259811 Q96HB5 CCDC120 Q96HB5.4.S337.p_CCDC120 Q96HB5-4_S337s _1_1_337_337 Q96HB5-4 Q96HB5-4|Q96HB5-3|Q96HB5-5 Isoform 4 of Coiled-coil domain-containing protein 120 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15134.15134.3 11.3 6.88 2.299 6 1 1 0 724.3735 2091.1396 S337s TMT10 329 (R) SASSFEGRsVPATPVLTR (G) S(0.0)AS(0.0)S(0.0)FEGRS(0.99)VPAT(0.0)PVLT(0.0)R s:Phosphorylated S CCDC120 75538.7 1 4 1058.1 182.62 HUMAN 1 11.4759 16.3859 ASSGDHPTDTEMKEE-p Q02790;T436-p ASSGDHPTDTEMKEE 0.0782221681558717 0.356114512254626 0.439 0.174 23.6230864520002 5.94755302771089 0.439 0.174 0.00434201535350203 0.254240478493824 4.70328867881149 1.27491413351437 Q02790 FKBP4 Q02790.T436.p_FKBP4 Q02790_T436t _1_1_436_436 Q02790 Q02790 Peptidyl-prolyl cis-trans isomerase FKBP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6963.6963.4 18.72 13.75 1.374 4 1 1 0 822.1673 3205.6817 T436t TMT10 425 (K) AKAEASSGDHPtDTEMKEEQK (S) AKAEAS(0.0)S(0.0)GDHPT(0.99)DT(0.0)EMKEEQK K:TMT10,t:Phosphorylated T FKBP4 52088.9 2 13 706.1 239.22 HUMAN 1 23.6231 5.9476 ASSGDQGSPPCFLRF-p O75147;S10-p ASSGDQGSPPCFLRF 0.760587950912004 0.21055906403453 0.049 -0.127666666666667 2.27984701851372 8.90044421231099 0.049 -0.127666666666667 0.591582472472003 0.128811779154671 0.56992144748901 -1.79049300640759 O75147 OBSL1 O75147.S10.p_OBSL1 O75147_S10s _1_1_10_10 O75147 O75147|A6NN50|O75147-4|O75147-1|O75147-2 Obscurin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15318.15522.3 11.81 11.81 5.225 3 1 1 0 596.6046 1707.8322 S10s TMT10 3 (K) ASSGDQGsPPCFLR (F) AS(0.0)S(0.0)GDQGS(0.99)PPCFLR C:Carbamidomethylation,s:Phosphorylated S OBSL1 210023.9 2 1 4483.1 30.85 HUMAN 1 2.2798 -8.9004 ASSHSSQTQGGGSVT-p P02545;T409-p ASSHSSQTQGGGSVT 0.108078410418423 0.00153965981191405 0.393333333333333 -0.961333333333333 20.3268005682908 45.2679294286144 0.393333333333333 -0.961333333333334 0.00927512867118408 2.9730831608811e-05 3.9494389502416 -12.7749690435113 P02545 LMNA P02545.T409.p_LMNA P02545_T409t _1_1_409_409 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.4303.4303.5 13.63 13.63 1.11 7 1 1 0 483.6582 2334.298 T409t TMT10 402 (R) ASSHSSQtQGGGSVTKK (R) AS(0.0)S(0.0)HS(0.0)S(0.0)QT(0.99)QGGGS(0.0)VT(0.0)KK K:TMT10,t:Phosphorylated T LMNA 74423.5 8 22 60.1 706.83 HUMAN 1 20.3268 -45.2679 ASSKNYGSPLISGST-p Q15648;S1433-p ASSKNYGSPLISGST 0.800969055659251 0.0265180454973302 0.0363333333333333 0.335666666666667 1.85546462736 21.3976104190509 0.0363333333333333 0.335666666666667 0.652309250349109 0.00724834669884159 0.476550282046496 4.18125448397539 Q15648 MED1 Q15648.S1433.p_MED1 Q15648_S1433s _1_1_1433_1433 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17301.17301.2 15.81 15.81 2.711 5 1 1 0 929.9934 1779.0053 S1433s TMT10 1430 (K) NYGsPLISGSTPK (H) NY(0.0)GS(0.99)PLIS(0.0)GS(0.0)T(0.0)PK K:TMT10,s:Phosphorylated S MED1 169445 5 24 115.1 566.87 HUMAN 1 1.8555 21.3976 ASSKRMLSPANSLDI-p P15822;S1749-p ASSKRMLSPANSLDI 0.172323036873072 0.933273776581181 0.254 -0.0183333333333333 15.2068057553617 0.423281677789848 0.254 -0.0183333333333333 0.0301522291133184 0.907134809015359 2.91732851255699 -0.122209730311283 P15822 HIVEP1 P15822.S1749.p_HIVEP1 P15822_S1749sS1753s_2_2_1749_1753 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23594.23594.4 9.77 9.77 99 2 2 2 0 574.2825 2134.1765 S1749s S1753s TMT10 1746 (K) RMLsPANsLDIAMEK (H) RMLS(1.0)PANS(1.0)LDIAMEK K:TMT10,s:Phosphorylated S HIVEP1 299483.8 4 42 82.1 631.69 HUMAN 1 15.2068 -0.4233 ASSLGLVSLGGKATT-p P50454;S82-p ASSLGLVSLGGKATT 0.274136646553826 0.372503003892063 -0.166 -0.0973333333333333 10.6445506552521 5.68906938947791 -0.166 -0.0973333333333333 0.0862074769047091 0.269831756866505 -2.09394796040091 -1.22869121130675 P50454 SERPINH1 P50454.S82.p_SERPINH1 P50454_S82s _1_1_82_82 P50454 P50454|E9PPV6 Serpin H1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.37280.37280.3 25.29 25.29 1.179 4 1 1 0 1030.5803 3009.76 S82s TMT10 61 (K) DQAVENILVSPVVVASSLGLVsLGGK (A) DQAVENILVS(0.0)PVVVAS(0.0)S(0.0)LGLVS(0.99)LGGK K:TMT10,s:Phosphorylated S SERPINH1 46553.8 1 2 3277.1 55.21 HUMAN 1 -10.6446 -5.6891 ASSLLGGSPRRPCGR-p Q92729;S853-p ASSLLGGSPRRPCGR 0.530635019877545 0.044002532073688 -0.0853333333333333 -0.317333333333333 5.09348716029626 18.165087679722 -0.0853333333333333 -0.317333333333333 0.309493322978452 0.015257775905696 -1.12116284461163 -3.49286057610338 Q92729 PTPRU Q92729.S853.p_PTPRU Q92729_S853s _1_1_853_853 Q92729 Q92729|Q92729-4|Q92729-2|Q92729-3 Receptor-type tyrosine-protein phosphatase U HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16947.16947.3 20.95 20.95 1.346 5 1 1 0 595.2984 1703.9125 S853s TMT10 840 (R) SGGVTEASSLLGGsPR (R) S(0.0)GGVT(0.0)EAS(0.0)S(0.0)LLGGS(0.99)PR s:Phosphorylated S PTPRU 164360.4 2 1 4765.1 26.93 HUMAN 1 -5.0935 -18.1651 ASSNKDFTPNRDKKT-p Q7Z6E9;T1468-p ASSNKDFTPNRDKKT 0.273873820093132 0.465649977528607 0.206 -0.08 10.6517741449459 4.42649788770693 0.206 -0.08 0.0860642097762704 0.360869527718079 2.09520912196317 -0.997643977652309 Q7Z6E9 RBBP6 Q7Z6E9.T1468.p_RBBP6 Q7Z6E9_T1468t _1_1_1468_1468 Q7Z6E9 Q7Z6E9|Q7Z6E9-2|Q7Z6E9-4 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7111.7111.3 11.75 11.75 1.313 3 1 1 0 749.7302 2167.2074 T1468t TMT10 1461 (R) ASSNKDFtPNRDK (K) AS(0.0)S(0.0)NKDFT(0.99)PNRDK K:TMT10,t:Phosphorylated T RBBP6 202473.6 7 21 27.1 935.6 HUMAN 1 10.6518 -4.4265 ASSNSRKSLSPGVSR-p Q9UKV3;S655-p ASSNSRKSLSPGVSR 0.655793596188824 0.0190262040703402 0.0623333333333333 0.376666666666667 3.43757710259604 23.6642378557276 0.0623333333333333 0.376666666666667 0.453150318671422 0.00430106706521653 0.807970192196672 4.70776085690162 Q9UKV3 ACIN1 Q9UKV3.S655.p_ACIN1 Q9UKV3_S655s _1_1_655_655 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8015.8015.2 8.59 1.87 2.098 3 1 1 0 556.2897 1031.6047 S655s TMT10 655 (K) sLSPGVSR (D) S(0.99)LS(0.0)PGVS(0.0)R s:Phosphorylated S ACIN1 152258.2 1 19 32.2 899.18 HUMAN 1 3.4376 23.6642 ASSPEAASPTEQGPA-p Q92766;S1140-p ASSPEAASPTEQGPA 0.254658962170373 0.751199828908856 -0.225 0.0383333333333334 11.3037329366642 1.71634818006126 -0.225 0.0383333333333334 0.0740673328941335 0.673542775176322 -2.20940878049521 0.444977819148262 Q92766 RREB1 Q92766.S1140.p_RREB1 Q92766_S1134sS1135sS1140s_3_3_1134_1140 Q92766 Q92766 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12796.12796.4 11.4 11.4 2.795 8 3 3 0 906.4177 3382.7581 S1134s S1135s S1140s TMT10 1125 (K) ESSEPPAPAssPEAAsPTEQGPAGTSKK (R) ES(0.0)S(0.0)EPPAPAS(0.99)S(0.99)PEAAS(0.99)PT(0.0)EQGPAGT(0.0)S(0.0)KK K:TMT10,s:Phosphorylated S RREB1 184269.8 1 35 179.1 480.48 HUMAN 1 -11.3037 1.7163 ASSPRSSSPHDKNLP-p O75592;S2806-p ASSPRSSSPHDKNLP 0.760164925160342 0.722327309446696 0.0753333333333333 -0.0973333333333333 2.28412229800546 1.94458830689615 0.0753333333333334 -0.0973333333333333 0.591000393712376 0.639059314641779 0.570842486113569 -0.496438396622391 O75592 MYCBP2 O75592.S2806.p_MYCBP2 O75592_S2806s _1_1_2806_2806 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3074.3074.3 7.11 4.56 1.156 3 1 1 0 432.5518 1215.6734 S2806s TMT10 2804 (R) SSsPHDK (N) S(0.0)S(0.0)S(0.99)PHDK K:TMT10,s:Phosphorylated S MYCBP2 518176.7 4 13 252.1 405.77 HUMAN 1 2.2841 -1.9446 ASSRGTLSDSEIETN-p Q8WXG6;S1239-p ASSRGTLSDSEIETN 0.39252045780296 0.83187906681382 0.125333333333333 0.0236666666666667 7.48983463423393 1.11845129074377 0.125333333333333 0.0236666666666667 0.178244663615334 0.772956174820099 1.54651262077621 0.3033019691284 Q8WXG6 MADD Q8WXG6.S1239.p_MADD Q8WXG6_S1239sS1241s_2_2_1239_1241 Q8WXG6 Q8WXG6|Q8WXG6-2|A0A0A0MRB5|Q8WXG6-3|Q8WXG6-7|Q8WXG6-4|Q8WXG6-5|Q8WXG6-8|Q8WXG6-6|F8W8U2 MAP kinase-activating death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27689.27689.3 12.7 8.11 1.409 8 2 2 0 892.7554 2516.3132 S1239s S1241s TMT10 1236 (R) GTLsDsEIETNSATSTIFGK (A) GT(0.0)LS(0.99)DS(0.99)EIET(0.0)NS(0.0)AT(0.0)S(0.0)T(0.0)IFGK K:TMT10,s:Phosphorylated S MADD 184612.2 1 14 546.1 275.73 HUMAN 1 7.4898 1.1185 ASSRVSGSFPEDSSK-p O15400;S131-p ASSRVSGSFPEDSSK 0.0636603099033149 0.0157882991038646 -0.436666666666667 -0.372666666666667 25.8216422226717 24.8999411722193 -0.436666666666667 -0.372666666666667 0.0026171931667974 0.00323598040228613 -5.25492895640031 -5.01225619440723 O15400 STX7 O15400.S131.p_STX7 O15400_S131s _1_1_131_131 O15400 O15400|O15400-2 Syntaxin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13435.13646.3 8.68 8.68 2.377 4 1 1 0 559.9427 1597.8474 S131s TMT10 128 (R) VSGsFPEDSSK (E) VS(0.0)GS(0.99)FPEDS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S STX7 29929.1 1 8 1215.1 165.8 HUMAN 1 -25.8216 -24.8999 ASSSGPRSPLDQRSP-p O14646;S1677-p ASSSGPRSPLDQRSP 0.781262128607466 0.491301528159701 0.0403333333333333 -0.0813333333333333 2.06026821731587 4.12443496722592 0.0403333333333333 -0.0813333333333333 0.622261853513903 0.386862383549448 0.52210788417921 -0.940678970294129 O14646 CHD1 O14646.S1677.p_CHD1 O14646_S1677s _1_1_1677_1677 O14646 O14646|O14646-2 Chromodomain-helicase-DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4852.4852.3 10.63 5.49 2.527 4 1 1 0 556.276 1586.8448 S1677s TMT10 1670 (R) ASSSGPRsPLDQR (S) AS(0.0)S(0.0)S(0.0)GPRS(0.99)PLDQR s:Phosphorylated S CHD1 197825.1 2 9 848.1 212.75 HUMAN 1 2.0603 -4.1244 ASSSVSFSPGGGGGG-p Q6P1R3;S83-p ASSSVSFSPGGGGGG 0.653603237035686 0.818443626474644 0.064 0.032 3.46336719047542 1.21687493326385 0.064 0.032 0.450467310878082 0.755635767336967 0.813053555993219 0.327394834978117 Q6P1R3 MSANTD2 Q6P1R3.S83.p_MSANTD2 Q6P1R3_S83s _1_1_83_83 Q6P1R3 Q6P1R3|Q6P1R3-3|E9PPE2|B4E1M0 Myb/SANT-like DNA-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14956.14956.4 23.36 23.36 1.314 6 1 1 0 641.2961 2482.1942 S83s TMT10 74 (R) SAASSSVSFsPGGGGGGAAAAAAAACR (G) S(0.0)AAS(0.0)S(0.0)S(0.0)VS(0.0)FS(0.99)PGGGGGGAAAAAAAACR C:Carbamidomethylation,s:Phosphorylated S MSANTD2 61945.8 2 4 1991.1 103.76 HUMAN 1 3.4634 1.2169 ASSTRCLSPQAEHAG-p Q5VTI5;S145-p ASSTRCLSPQAEHAG 0.453021796673603 0.187178585400915 0.127666666666667 -0.138666666666667 6.34624494722897 9.57186797832089 0.127666666666667 -0.138666666666667 0.231939921199734 0.110360383803411 1.34601811258847 -1.90668124388873 Q5VTI5 NotFound Q5VTI5.S145.p_NotFound Q5VTI5_S145s _1_1_145_145 Q5VTI5 Q5VTI5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7031.7031.3 15.09 15.09 99 1 1 1 0 545.2621 1553.8056 S145s TMT10 143 (R) CLsPQAEHAGVR (T) CLS(1.0)PQAEHAGVR C:Carbamidomethylation,s:Phosphorylated S PLEKHA6 119745.7 4 5 52.1 743.36 HUMAN 1 6.3462 -9.5719 ASSVGVLSPQKKSPP-p Q9UGU5;S497-p ASSVGVLSPQKKSPP 0.171396449036957 0.002248452490626 -0.216333333333333 -0.757333333333333 15.2472859892527 41.0202774734431 -0.216333333333333 -0.757333333333334 0.0298724883943371 7.90628112664718e-05 -2.92495982644115 -10.59992618245 Q9UGU5 HMGXB4 Q9UGU5.S497.p_HMGXB4 Q9UGU5_S497s _1_1_497_497 Q9UGU5 Q9UGU5 HMG domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13294.13294.2 13.42 13.42 7.471 3 1 1 0 984.5786 1888.1835 S497s TMT10 490 (K) ASSVGVLsPQKK (S) AS(0.0)S(0.0)VGVLS(0.99)PQKK K:TMT10,s:Phosphorylated S HMGXB4 66052.7 8 5 1005.1 189.25 HUMAN 1 -15.2473 -41.0203 ASSVKTNSPAYSDIS-p O15014;S842-p ASSVKTNSPAYSDIS 0.928133198175071 0.101560945858586 -0.0156666666666667 0.182333333333333 0.64186250483054 13.1248108962823 -0.0156666666666667 0.182333333333333 0.862608532217999 0.0486988729527915 -0.181462045021378 2.53217640558758 O15014 ZNF609 O15014.S842.p_ZNF609 O15014_S842s _1_1_842_842 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17142.17142.3 20.16 20.16 1.442 6 1 1 0 1070.1879 3128.5838 S842s TMT10 840 (K) TNsPAYSDISDAGEDGEGKVDSVK (S) T(0.0)NS(0.99)PAY(0.0)S(0.0)DIS(0.0)DAGEDGEGKVDS(0.0)VK K:TMT10,s:Phosphorylated S ZNF609 152443.5 2 24 63.1 699.07 HUMAN 1 -0.6419 13.1248 ASTASELSPKSKARP-p Q3KQU3;S460-p ASTASELSPKSKARP 0.223663787104468 0.000952253650599092 -0.221666666666667 -1.43833333333333 12.498030619957 55.9618803376445 -0.221666666666667 -1.43833333333333 0.0562596385976566 2.53403124929733e-06 -2.42099580340747 -20.2896272832525 Q3KQU3 MAP7D1 Q3KQU3.S460.p_MAP7D1 Q3KQU3_S460s _1_1_460_460 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15373.15373.2 17.06 10.58 2.241 5 1 1 0 864.962 1648.9522 S460s TMT10 451 (R) LSASTASELsPK (S) LS(0.0)AS(0.0)T(0.0)AS(0.0)ELS(0.99)PK K:TMT10,s:Phosphorylated S MAP7D1 93160.6 3 17 160.1 495.56 HUMAN 1 -12.498 -55.9619 ASTKDSESPSQKKKK-p E7ETY2;S1471-p ASTKDSESPSQKKKK 0.719055536391984 0.00554351977683076 0.123333333333333 0.564333333333333 2.70284731247659 32.7030338163302 0.123333333333333 0.564333333333333 0.536679824089798 0.000536656777352997 0.659382821420632 7.28564965673312 E7ETY2 TCOF1 E7ETY2.S1471.p_TCOF1 E7ETY2_S1471s _1_1_1471_1471 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5157.5157.2 12.74 8.3 1.13 5 1 1 0 1016.5309 1952.0903 S1471s TMT10 1464 (K) ASTKDSEsPSQK (K) AS(0.0)T(0.0)KDS(0.0)ES(0.99)PS(0.0)QK K:TMT10,s:Phosphorylated S TCOF1 152529.5 8 36 19.1 1034.65 HUMAN 1 2.7028 32.703 ASTKYQKSQGMASLN-p P35221;S846-p ASTKYQKSQGMASLN 0.375226204548174 0.420518020845712 -0.185666666666667 0.0996666666666667 7.87880554102718 5.00789106062483 -0.185666666666667 0.0996666666666667 0.162974420663159 0.31565370695704 -1.61412935909991 1.1052803014401 P35221 CTNNA1 P35221.S846.p_CTNNA1 P35221_S846s _1_1_846_846 P35221 P35221|P35221-3 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29223.29223.3 13.23 13.23 4.754 3 1 1 0 709.7076 2047.1411 S846s TMT10 846 (K) sQGMASLNLPAVSWK (M) S(0.99)QGMAS(0.0)LNLPAVS(0.0)WK K:TMT10,s:Phosphorylated S CTNNA1 100754.2 1 22 169.1 491.55 HUMAN 1 -7.8788 5.0079 ASTLQLGSPRATGVD-p Q7L8L6;S95-p ASTLQLGSPRATGVD 0.177184179558631 0.192367063458032 0.258 0.149333333333333 14.8961903058728 9.41147480564125 0.258 0.149333333333333 0.032387764251448 0.114512400670177 2.8590041585427 1.8789083204776 Q7L8L6 FASTKD5 Q7L8L6.S95.p_FASTKD5 Q7L8L6_S95s _1_1_95_95 Q7L8L6 Q7L8L6 FAST kinase domain-containing protein 5, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12401.12401.2 14.01 9.09 6.362 3 1 1 0 669.8522 1258.7317 S95s TMT10 88 (K) ASTLQLGsPR (A) AS(0.0)T(0.0)LQLGS(0.99)PR s:Phosphorylated S FASTKD5 87542.7 1 1 5561.1 18.19 HUMAN 1 14.8962 9.4115 ASTPTTVSDGENKKD-p Q9Y320;S288-p ASTPTTVSDGENKKD 0.696852709038782 0.00749742459033072 0.0623333333333333 -0.448666666666667 2.9480945393561 30.3880503583377 0.0623333333333333 -0.448666666666667 0.507213198506424 0.000914523698758167 0.709849852707246 -6.54051899604806 Q9Y320 TMX2 Q9Y320.S288.p_TMX2 Q9Y320_S288s _1_1_288_288 Q9Y320 Q9Y320|Q9Y320-2 Thioredoxin-related transmembrane protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15475.15475.3 18.8 18.8 1.163 5 1 1 0 998.8193 2914.4682 S288s TMT10 270 (K) AGDNIPEEQPVASTPTTVsDGENK (K) AGDNIPEEQPVAS(0.0)T(0.0)PT(0.0)T(0.0)VS(0.99)DGENK K:TMT10,s:Phosphorylated S TMX2 34379.4 8 4 2316.1 88.11 HUMAN 1 2.9481 -30.3881 ASTPVSGTPQASPMI-p Q9UHR4;T257-p ASTPVSGTPQASPMI 0.295243174589512 0.0345502732470782 -0.166 -0.292 9.98029960499236 19.687311174819 -0.166 -0.292 0.100454648764231 0.0107465455178602 -1.97828801716371 -3.80866999667559 Q9UHR4 BAIAP2L1 Q9UHR4.T257.p_BAIAP2L1 Q9UHR4_T257t_1_1_257_257 Q9UHR4 Q9UHR4 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30278.30278.4 18.63 18.63 1.217 6 1 1 0 896.4573 3486.8411 T257t M263m TMT10 239 (K) IMNMIEEIKTPASTPVSGtPQASPmIER (S) IM(0.0)NM(0.0)IEEIKT(0.0)PAS(0.0)T(0.0)PVS(0.0)GT(0.99)PQAS(0.0)PM(0.99)IER K:TMT10,t:Phosphorylated T,m:Oxidized methionine BAIAP2L1 57224 9 4 661.1 251.53 HUMAN 1 -9.9803 -19.6873 ASTSRRFTPPSTALS-p Q01196-8;T41-p ASTSRRFTPPSTALS 0.455753731578259 0.432361175666581 -0.0996666666666667 -0.078 6.29409203749509 4.85235848557781 -0.0996666666666667 -0.078 0.234741997731179 0.327162977051735 -1.33678914247848 -1.07671908107467 Q01196 RUNX1 Q01196.8.T41.p_RUNX1 Q01196-8_T41t _1_1_41_41 Q01196-8 Q01196-8|Q01196-2|Q01196-10|Q01196-5|Q01196-6 Isoform AML-1G of Runt-related transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15840.15840.4 11.26 8.66 1.627 4 1 1 0 475.0138 1817.0685 T41t TMT10 39 (R) RFtPPSTALSPGK (M) RFT(0.99)PPS(0.0)T(0.0)ALS(0.0)PGK K:TMT10,t:Phosphorylated T RUNX1 52102.5 2 1 1762.1 116.8 HUMAN 1 -6.2941 -4.8524 ASVARHPSREQLIDY-p Q96RT1-8;S1293-p ASVARHPSREQLIDY 0.539507901385774 0.28050102777343 -0.093 0.105 4.9510973858483 7.27542728534206 -0.093 0.105 0.319808690721677 0.187265283097147 -1.09508876497751 1.50871098240647 Q96RT1 ERBB2IP Q96RT1.8.S1293.p_ERBB2IP Q96RT1-8_S1293s _1_1_1293_1293 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5|Q96RT1-4|Q96RT1-6|B4DIP2 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24520.24520.3 15.7 15.7 10.214 2 1 1 0 684.6908 1972.0887 S1293s Hydrogen 1291 (R) HPsREQLIDYLMLK (V) HPS(0.99)REQLIDY(0.0)LMLK K:TMT10-Lys-Only,s:Phosphorylated S ERBIN 159762.8 10 28 81.1 633.5 HUMAN 1 -4.9511 7.2754 ASVCSIDSTDDLKSS-p Q96N64;S587-p ASVCSIDSTDDLKSS 0.132838412441473 0.983624145933946 -0.313 -0.0023333333333333 18.0875991873676 0.104727644854337 -0.313 -0.00233333333333331 0.0155324541844432 0.97617399842219 -3.48001539295152 -0.031268708538171 Q96N64 PWWP2A Q96N64.S587.p_PWWP2A Q96N64_S584sS587s_2_2_584_587 Q96N64 Q96N64 PWWP domain-containing protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15015.15015.3 14.34 14.34 1.152 8 2 2 0 950.4384 2689.3805 S584s S587s TMT10 574 (K) KSDSSSASVCsIDsTDDLK (S) KS(0.0)DS(0.0)S(0.0)S(0.0)AS(0.0)VCS(0.99)IDS(0.99)T(0.0)DDLK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PWWP2A 82415.3 2 8 1984.1 104.07 HUMAN 1 -18.0876 -0.1047 ASVDDDDSGWELSMP-p Q5VZE5;S12-p ASVDDDDSGWELSMP 0.408526281145435 0.087064041164927 -0.123 0.212333333333333 7.17453364152153 14.0362978134313 -0.123 0.212333333333333 0.191666686913897 0.0394793704495836 -1.49153115303031 2.69796172961818 Q5VZE5 NAA35 Q5VZE5.S12.p_NAA35 Q5VZE5_S12s _1_1_12_12 Q5VZE5 Q5VZE5|Q5VZE5-2 N-alpha-acetyltransferase 35, NatC auxiliary subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23665.23665.3 15.55 10.02 2.266 3 1 1 0 807.0317 2339.1113 S12s TMT10 5 (K) ASVDDDDsGWELSMPEK (M) AS(0.0)VDDDDS(0.99)GWELS(0.0)MPEK K:TMT10,s:Phosphorylated S NAA35 84607.5 2 1 3650.1 46.07 HUMAN 1 -7.1745 14.0363 ASVDGNRSRSRTLSQ-p Q9UN36;S344-p ASVDGNRSRSRTLSQ 0.10484325272307 0.210353170914259 -0.455333333333333 0.175333333333333 20.644624887635 8.90676155757267 -0.455333333333333 0.175333333333333 0.00862060034041225 0.128624542854185 -4.0186799619642 1.79158565657216 Q9UN36 NDRG2 Q9UN36.S344.p_NDRG2 Q9UN36_S344s _1_1_344_344 Q9UN36 Q9UN36|Q9UN36-6|Q9UN36-3|Q9UN36-2|A0A0A0MS87|Q9UN36-5|Q9UN36-4|G3V578 Protein NDRG2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8458.8458.3 14.62 14.62 2.19 6 1 1 0 634.6472 1821.9616 S344s TMT10 330 (R) TASLTSAASVDGNRsR (S) T(0.0)AS(0.0)LT(0.0)S(0.0)AAS(0.0)VDGNRS(0.99)R s:Phosphorylated S NDRG2 41139.8 1 4 2649.1 75.22 HUMAN 1 -20.6446 8.9068 ASVESPGTPKETPIE-p Q8IVT2;T287-p ASVESPGTPKETPIE 0.279511335044862 0.0192918570550088 -0.183333333333333 -0.408333333333333 10.4677319043095 23.5587424497606 -0.183333333333333 -0.408333333333333 0.0897897597597509 0.00440682449768035 -2.06310174689635 -4.68236001534606 Q8IVT2 MISP Q8IVT2.T287.p_MISP Q8IVT2_T287t _1_1_287_287 Q8IVT2 Q8IVT2 Mitotic interactor and substrate of PLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28193.28193.5 28.05 28.05 1.193 7 1 1 0 792.4113 3878.0588 T287t TMT10 263 (R) AVPTWASVQVVDDPGSLASVESPGtPKETPIER (E) AVPT(0.0)WAS(0.0)VQVVDDPGS(0.0)LAS(0.0)VES(0.0)PGT(0.99)PKET(0.0)PIER K:TMT10,t:Phosphorylated T MISP 75526.3 1 7 490.1 294.31 HUMAN 1 -10.4677 -23.5587 ASVGKSKTPLVARKK-p P28290;T1140-p ASVGKSKTPLVARKK 0.371512080146296 0.0385256479431313 0.147333333333333 -0.313 7.97516188552071 19.0000545485949 0.147333333333333 -0.313 0.159398346304447 0.0125890959944012 1.63085155026396 -3.66434926471978 P28290 SSFA2 P28290.T1140.p_SSFA2 P28290_T1140t _1_1_1140_1140 P28290 P28290|P28290-3|E9PHV5|P28290-2|E7EUL7 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8197.8197.3 7.88 7.88 1.355 2 1 1 0 470.6139 1329.8618 T1140t TMT10 1138 (K) SKtPLVAR (K) S(0.0)KT(0.99)PLVAR K:TMT10,t:Phosphorylated T SSFA2 139638.7 1 30 73.1 652.35 HUMAN 1 7.9752 -19.0001 ASVIKSPSDPSHVSV-p Q8NDX5-7;S667-p ASVIKSPSDPSHVSV 0.99560477611939 0.00821934864720606 0.000999999999999992 0.547333333333333 0.0359693924752372 29.6703660574072 0.000999999999999973 0.547333333333333 0.991751944720459 0.00107885578398135 0.0108237107856343 6.32257829705174 Q8NDX5 PHC3 Q8NDX5.7.S667.p_PHC3 Q8NDX5-7_S667s _1_1_667_667 Q8NDX5-7 Q8NDX5-7|Q8NDX5-2|E7EX82 Isoform 7 of Polyhomeotic-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25637.25637.3 17.85 16.63 1.108 6 1 1 0 882.4682 2565.4238 S667s TMT10 665 (K) SPsDPSHVSVPPPPLLLPAATTR (S) S(0.0)PS(0.99)DPS(0.0)HVS(0.0)VPPPPLLLPAAT(0.0)T(0.0)R s:Phosphorylated S PHC3 108276.8 2 12 439.1 312.22 HUMAN 1 0.036 29.6704 ASVLPAATPRQSLGH-p P13861;T54-p ASVLPAATPRQSLGH 0.121347188474092 0.0402887879492486 1.01366666666667 -0.556666666666667 19.049432732129 18.7034946651444 1.01366666666667 -0.556666666666667 0.0124467717871437 0.0134787784062595 3.67785274536131 -3.60296890734638 P13861 PRKAR2A P13861.T54.p_PRKAR2A P13861_T54t _1_1_54_54 P13861 P13861|P13861-2 cAMP-dependent protein kinase type II-alpha regulatory subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14990.14990.3 12.14 12.14 6.792 2 1 1 0 487.2678 1379.8208 T54t TMT10 45 (R) APASVLPAAtPR (Q) APAS(0.0)VLPAAT(0.99)PR t:Phosphorylated T PRKAR2A 45859.9 2 1 1121.1 175.11 HUMAN 1 19.0494 -18.7035 ASVNLKVSPKRGRPA-p O75475;S177-p ASVNLKVSPKRGRPA 0.349927283596409 0.538846897197818 0.130666666666667 -0.068 8.47097526448762 3.61311905120963 0.130666666666667 -0.068 0.142200942063893 0.435199206538685 1.71678060581155 -0.842281923482941 O75475 PSIP1 O75475.S177.p_PSIP1 O75475_S177s _1_1_177_177 O75475 O75475|O75475-2|O75475-3 PC4 and SFRS1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.37662.38263.5 25.37 25.37 2.02 6 1 1 0 645.9579 3145.7923 S177s TMT10 156 (K) QVETEEAGVVTTATASVNLKVsPK (R) QVET(0.0)EEAGVVT(0.0)T(0.0)AT(0.0)AS(0.0)VNLKVS(0.99)PK K:TMT10,s:Phosphorylated S PSIP1 60216.3 68 8 382.1 334.17 HUMAN 1 8.471 -3.6131 ASVRREESPMDVDQP-p Q7Z6Z7;S3808-p ASVRREESPMDVDQP 0.854294972337463 0.280206374359103 -0.0326666666666667 0.143333333333333 1.32687525623762 7.2810747753455 -0.0326666666666667 0.143333333333333 0.73673698825291 0.187021924839622 -0.353974686800041 1.50969567634542 Q7Z6Z7 HUWE1 Q7Z6Z7.S3808.p_HUWE1 Q7Z6Z7_S3808s _1_1_3808_3808 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13496.13496.4 20.1 17.26 6.015 7 1 1 0 957.1913 3745.7863 S3808s TMT10 3805 (R) REEsPMDVDQPSPSAQDTQSIASDGTPQGEK (E) REES(0.99)PMDVDQPS(0.0)PS(0.0)AQDT(0.0)QS(0.0)IAS(0.0)DGT(0.0)PQGEK K:TMT10,s:Phosphorylated S HUWE1 485818.9 3 63 11.1 1210.45 HUMAN 1 -1.3269 7.2811 ASVSGPNSPSESRRE-p Q9UJV3;S116-p ASVSGPNSPSESRRE 0.603085598910672 0.84337370712844 0.0913333333333333 -0.027 4.05621500632923 1.03925092588343 0.0913333333333333 -0.027 0.392987285224236 0.78718155160334 0.927860005728018 -0.283667245225621 Q9UJV3 MID2 Q9UJV3.S116.p_MID2 Q9UJV3_S116s _1_1_116_116 Q9UJV3 Q9UJV3|Q9UJV3-2 Probable E3 ubiquitin-protein ligase MID2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4188.4188.3 16.89 11.09 3.896 5 1 1 0 580.6144 1659.8612 S116s TMT10 109 (K) ASVSGPNsPSESRR (E) AS(0.0)VS(0.0)GPNS(0.99)PS(0.0)ES(0.0)RR s:Phosphorylated S MID2 85091.6 4 2 3108.1 60.45 HUMAN 1 4.0562 -1.0393 ASVSGPNSPSETRRE-p O15344;S96-p ASVSGPNSPSETRRE 0.386739858215171 0.663783313852855 -0.119333333333333 -0.0426666666666667 7.6370721202389 2.43642116961628 -0.120809666959121 -0.0426666666666666 0.172302979718214 0.570634313298865 -1.57213142757634 -0.603343470737809 O15344 MID1 O15344.S96.p_MID1 O15344_S96s _1_1_96_96 O15344 O15344|O15344-2|A0A087X255|A0A087X0X0 E3 ubiquitin-protein ligase Midline-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4357.4357.3 13.98 10.02 2.759 5 1 1 0 585.2856 1673.8768 S96s TMT10 89 (K) ASVSGPNsPSETRR (E) AS(0.0)VS(0.0)GPNS(0.99)PS(0.0)ET(0.0)RR s:Phosphorylated S MID1 76961 3 4 2821.1 69.37 HUMAN 1 -7.6371 -2.4364 ASVTPPGSLELLQPG-p Q12933-2;S11-p ASVTPPGSLELLQPG 0.365465923412246 0.0386745972221711 0.153333333333333 0.335666666666667 8.11947903352947 18.96849752627 0.153333333333333 0.335666666666667 0.154188540174632 0.0126809049522159 1.6558808863677 3.65779254266639 Q12933 TRAF2 Q12933.2.S11.p_TRAF2 Q12933-2_S11s _1_1_11_11 Q12933-2 Q12933-2 Isoform 2 of TNF receptor-associated factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32163.32163.3 8.43 8.43 2.44 4 1 1 0 774.4043 2241.2328 S11s Acetyl 2 (M) AAASVTPPGsLELLQPGFSK (T) AAAS(0.0)VT(0.0)PPGS(0.99)LELLQPGFS(0.0)K K:TMT10,s:Phosphorylated S TRAF2 63265.6 1 2 5094.1 23.03 HUMAN 1 8.1195 18.9685 ASVVLNASGGLFSLK-p Q9UJV3;S13-p ASVVLNASGGLFSLK 0.0519571788354811 0.114318025782817 -0.499666666666667 0.299333333333333 28.0275877740565 12.42247064923 -0.499666666666667 0.299333333333333 0.00157485735334259 0.0572470266862807 -5.85374777735237 2.40625046391584 Q9UJV3 MID2 Q9UJV3.S13.p_MID2 Q9UJV3_S13s _1_1_13_13 Q9UJV3 Q9UJV3|Q9UJV3-2 Probable E3 ubiquitin-protein ligase MID2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37173.37173.3 15.24 13.27 1.834 4 1 1 0 728.7161 2104.1488 S13s Acetyl 2 (M) GESPASVVLNAsGGLFSLK (M) GES(0.0)PAS(0.0)VVLNAS(0.99)GGLFS(0.0)LK K:TMT10,s:Phosphorylated S MID2 85091.6 1 1 3108.1 60.45 HUMAN 1 -28.0276 12.4225 ASYRTSFSVGSDDEL-p Q9NRY4;S1176-p ASYRTSFSVGSDDEL 0.344875891920937 0.76235541833648 -0.169 -0.031 8.58779821073468 1.62879654583856 -0.169 -0.031 0.138426799828119 0.687258856881469 -1.73700824500516 -0.424885311662135 Q9NRY4 ARHGAP35 Q9NRY4.S1176.p_ARHGAP35 Q9NRY4_S1176sS1179s_2_2_1176_1179 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25357.25357.3 10.25 10.25 2.401 4 2 2 0 656.9586 1808.9228 S1176s S1179s TMT10 1173 (R) TSFsVGsDDELGPIR (K) T(0.0)S(0.0)FS(0.99)VGS(0.99)DDELGPIR s:Phosphorylated S ARHGAP35 172051.4 3 23 247.1 410.47 HUMAN 1 -8.5878 -1.6288 ATAADQESEDDLSAS-p Q9Y4F1-2;S920-p ATAADQESEDDLSAS 0.0516557872639521 0.00225740740261622 0.482333333333333 0.889666666666667 28.1458140064268 40.9766758743992 0.482333333333333 0.889666666666667 0.00153256392806249 7.98605712761742e-05 5.88722802664714 10.5795019096554 Q9Y4F1 FARP1 Q9Y4F1.2.S920.p_FARP1 Q9Y4F1-2_S920s _1_1_920_920 Q9Y4F1-2 Q9Y4F1-2|C9JME2 Isoform 2 of FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18591.18591.5 22.94 22.94 1.126 10 1 1 0 869.6014 4264.0054 S920s TMT10 892 (K) SSSPAPEFLASSPPDNKSPDEATAADQEsEDDLSASR (T) S(0.0)S(0.0)S(0.0)PAPEFLAS(0.0)S(0.0)PPDNKS(0.0)PDEAT(0.0)AADQES(0.99)EDDLS(0.0)AS(0.0)R K:TMT10,s:Phosphorylated S FARP1 122909.6 6 40 147.2 514.5 HUMAN 1 28.1458 40.9767 ATAAETLSKNEVLYD-p Q9Y6D6;S308-p ATAAETLSKNEVLYD 0.0651075040180817 0.0269043515225813 -0.407666666666667 0.869666666666667 25.6505545284974 21.3123764874224 -0.407666666666667 0.869666666666667 0.00272235368241331 0.00739200668991974 -5.21045176705478 4.16220852761972 Q9Y6D6 ARFGEF1 Q9Y6D6.S308.p_ARFGEF1 Q9Y6D6_S308s _1_1_308_308 Q9Y6D6 Q9Y6D6 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18139.18139.4 22.62 17.8 1.141 9 1 1 0 1055.7302 4139.9264 S308s TMT10 275 (K) SLQDDTEPENGSDISSAENEQTEADQATAAETLsK (N) S(0.0)LQDDT(0.0)EPENGS(0.0)DIS(0.0)S(0.0)AENEQT(0.0)EADQAT(0.0)AAET(0.0)LS(0.99)K K:TMT10,s:Phosphorylated S ARFGEF1 210988.4 1 5 381.1 335.01 HUMAN 1 -25.6506 21.3124 ATAEEPLSPSTPTRR-p O43149;S1518-p ATAEEPLSPSTPTRR 0.689296686018885 0.0925159082438803 -0.0663333333333333 -0.230333333333333 3.03208045730175 13.6728336523313 -0.0663333333333333 -0.230333333333333 0.497498704615829 0.0429256257443515 -0.726920701972299 -2.63151005470428 O43149 ZZEF1 O43149.S1518.p_ZZEF1 O43149_S1518s _1_1_1518_1518 O43149 O43149 Zinc finger ZZ-type and EF-hand domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22839.22839.3 24.6 24.6 1.493 9 1 1 0 1015.5063 2964.5363 S1518s TMT10 1497 (K) LPSSSGLPAADVSPATAEEPLsPSTPTR (R) LPS(0.0)S(0.0)S(0.0)GLPAADVS(0.0)PAT(0.0)AEEPLS(0.99)PS(0.0)T(0.0)PT(0.0)R s:Phosphorylated S ZZEF1 335976 6 6 1481.1 138.54 HUMAN 1 -3.0321 -13.6728 ATAKAALSLPAKQAP-p Q14978-3;S457-p ATAKAALSLPAKQAP 0.876836931871133 0.0966849216025479 -0.0266666666666667 -0.191 1.12117993376117 13.4164563211326 -0.0266666666666667 -0.191 0.772470684185894 0.0455359464720144 -0.304004884923184 -2.58491501776776 Q14978 NOLC1 Q14978.3.S457.p_NOLC1 Q14978-3_S457s _1_1_457_457 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19320.19320.2 11.78 11.78 99 1 1 1 0 654.8895 1228.8029 S457s TMT10 454 (K) AALsLPAK (Q) AALS(1.0)LPAK K:TMT10,s:Phosphorylated S NOLC1 73744 2 10 72.1 655.55 HUMAN 1 -1.1212 -13.4165 ATAKAPGSPAAPRIS-p Q5SPY9;S307-p ATAKAPGSPAAPRIS 0.731724827574726 0.0342440514204021 0.0586666666666667 -0.411333333333333 2.57230631110167 19.7440253791413 0.0586666666666667 -0.411333333333333 0.553056331893614 0.0106071195106768 0.632118693434908 -3.82071261096844 Q5SPY9 NotFound Q5SPY9.S307.p_NotFound Q5SPY9_S307s _1_1_307_307 Q5SPY9 Q5SPY9|Q9NQX5 Neural proliferation differentiation and control protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9547.9547.4 18.25 18.25 6.181 3 1 1 0 521.2753 2002.1122 S307s TMT10 297 (K) ADYATAKAPGsPAAPR (I) ADY(0.0)AT(0.0)AKAPGS(0.99)PAAPR K:TMT10,s:Phosphorylated S NPDC1 43434.2 7 1 1634.1 125.02 HUMAN 1 2.5723 -19.744 ATALAAPSPPRARAR-p Q96GP6;S742-p ATALAAPSPPRARAR 0.330217561872316 0.36428514337932 0.387333333333333 -0.255666666666667 8.9947835530817 5.81373671269863 0.387333333333333 -0.255666666666667 0.126043845499948 0.26219616108641 1.80745982427778 -1.25102132873361 Q96GP6 SCARF2 Q96GP6.S742.p_SCARF2 Q96GP6_S742s _1_1_742_742 Q96GP6 A0A096LNX8|Q96GP6|Q96GP6-2 Scavenger receptor class F member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14881.14881.4 19.42 19.42 7.572 4 1 1 0 783.4137 3050.6697 S742s TMT10 721 (R) TRDPTPRPPGLPEEATALAAPsPPRAR (A) T(0.0)RDPT(0.0)PRPPGLPEEAT(0.0)ALAAPS(0.99)PPRAR s:Phosphorylated S SCARF2 97041.7 1 5 2656.1 74.96 HUMAN 1 8.9948 -5.8137 ATAPCLPSPTATRQA-p Q6PI47;S393-p ATAPCLPSPTATRQA 0.218730142557004 0.0447021604667015 0.222333333333333 -0.273 12.7216919894061 18.0648996110146 0.222333333333333 -0.273 0.0534356136381563 0.0156138512962265 2.4610361629549 -3.47255580955864 Q6PI47 KCTD18 Q6PI47.S393.p_KCTD18 Q6PI47_S393s _1_1_393_393 Q6PI47 Q6PI47|Q6PI47-3 BTB/POZ domain-containing protein KCTD18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19268.19268.3 15.07 15.07 1.387 5 1 1 0 708.3457 2043.0564 S393s TMT10 382 (R) TPLCATAPCLPsPTATR (Q) T(0.0)PLCAT(0.0)APCLPS(0.99)PT(0.0)AT(0.0)R C:Carbamidomethylation,s:Phosphorylated S KCTD18 47251.8 4 4 2706.1 73.29 HUMAN 1 12.7217 -18.0649 ATASGKVSPDHLDPE-p Q68DK2;S297-p ATASGKVSPDHLDPE 0.965867363550229 0.0235878837232123 0.012 0.441 0.291693668562727 22.1895980407706 0.012 0.441 0.935040954269144 0.00604004530146595 0.0853647417088818 4.36075802736964 Q68DK2 ZFYVE26 Q68DK2.S297.p_ZFYVE26 Q68DK2_S297s _1_1_297_297 Q68DK2 Q68DK2|Q68DK2-2|Q68DK2-5|G3V2D8|Q68DK2-4|G3V230 Zinc finger FYVE domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8999.8999.4 14.95 14.95 2.598 3 1 1 0 555.2869 2138.1606 S297s TMT10 290 (R) ATASGKVsPDHLDPER (A) AT(0.0)AS(0.0)GKVS(0.99)PDHLDPER K:TMT10,s:Phosphorylated S ZFYVE26 289306.4 4 2 898.1 203.99 HUMAN 1 0.2917 22.1896 ATASHRNTEEEGLKY-p Q9NYF8;T431-p ATASHRNTEEEGLKY 0.075039518939006 0.00526062627901912 0.392333333333333 0.692333333333333 24.0824256441216 33.1327457914013 0.392333333333333 0.692333333333333 0.00390622662253231 0.000486099775902446 4.81507462032467 7.43144296475074 Q9NYF8 BCLAF1 Q9NYF8.T431.p_BCLAF1 Q9NYF8_T431t _1_1_431_431 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8219.8219.3 13.38 13.38 3.257 4 1 1 0 772.3826 2235.177 T431t TMT10 422 (K) SFATASHRNtEEEGLK (Y) S(0.0)FAT(0.0)AS(0.0)HRNT(0.99)EEEGLK K:TMT10,t:Phosphorylated T BCLAF1 106234.3 1 22 10.1 1293.04 HUMAN 1 24.0824 33.1327 ATASRRGSPAPANPG-p O75676;S745-p ATASRRGSPAPANPG 0.373228695696441 0.0289010731926915 0.229 0.303333333333333 7.93522786998153 20.8394099574797 0.229 0.303333333333333 0.160870796837234 0.00824250091928565 1.62392232541114 4.05745588947041 O75676 RPS6KA4 O75676.S745.p_RPS6KA4 O75676_S745s _1_1_745_745 O75676 O75676|O75676-2|E9PJN1 Ribosomal protein S6 kinase alpha-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5720.5720.4 15.15 15.15 15.146 2 1 1 0 543.5517 2091.2187 S745s TMT10 743 (R) RGsPAPANPGRAPVASK (G) RGS(0.99)PAPANPGRAPVAS(0.0)K K:TMT10,s:Phosphorylated S RPS6KA4 86174.8 6 6 1564.1 131.32 HUMAN 1 7.9352 20.8394 ATATAPPSPLKRRRL-p Q92766;S161-p ATATAPPSPLKRRRL 0.185359924593682 0.00915300807229707 0.277333333333333 -0.503666666666667 14.3920027479452 28.8311869687764 0.277333333333333 -0.503666666666667 0.0363747255485937 0.00130882415982408 2.76517939876299 -6.07510386642018 Q92766 RREB1 Q92766.S161.p_RREB1 Q92766_S161s _1_1_161_161 Q92766 Q92766-2|Q92766-3|Q92766-5 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11939.11939.3 22.26 22.26 4.612 4 1 1 0 914.4999 2661.5179 S161s TMT10 146 (K) IHEKDPNSATATAPPsPLK (R) IHEKDPNS(0.0)AT(0.0)AT(0.0)APPS(0.99)PLK K:TMT10,s:Phosphorylated S RREB1 184269.8 7 9 179.1 480.48 HUMAN 1 14.392 -28.8312 ATCHSEDSDLEID__-p Q13371;S296-p ATCHSEDSDLEID__ 0.415964106515569 0.93398554967451 0.118 0.00966666666666668 7.03004437538793 0.419227019584798 0.118 0.00966666666666667 0.198150677904054 0.907982123284221 1.46627130326308 0.121088175680175 Q13371 PDCL Q13371.S296.p_PDCL Q13371_S296s _1_1_296_296 Q13371 Q13371|Q13371-2 Phosducin-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10958.10958.2 20.56 20.56 4.926 4 1 1 0 1001.401 1921.8283 S296s TMT10 287 (R) NSATCHSEDsDLEID (-) NS(0.0)AT(0.0)CHS(0.0)EDS(0.99)DLEID C:Carbamidomethylation,s:Phosphorylated S PDCL 34680.3 2 3 4196.1 35.57 HUMAN 1 7.03 0.4192 ATCSRIESPNENSNN-p P08047;S73-p ATCSRIESPNENSNN 0.252409750747624 0.0297216465981118 0.17 0.297 11.4044689678665 20.6661636606103 0.17 0.297 0.0723690885932893 0.00857795243904886 2.22712683685735 4.01947518469647 P08047 SP1 P08047.S73.p_SP1 P08047_S73s _1_1_73_73 P08047 P08047|P08047-2 Transcription factor Sp1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29418.29418.5 33.09 25.42 2.143 16 1 1 0 1126.5386 5548.6952 S73s TMT10 71 (R) IEsPNENSNNSQGPSQSGGTGELDLTATQLSQGANGWQIISSSSGATPTSK (E) IES(0.99)PNENS(0.0)NNS(0.0)QGPS(0.0)QS(0.0)GGT(0.0)GELDLT(0.0)AT(0.0)QLS(0.0)QGANGWQIIS(0.0)S(0.0)S(0.0)S(0.0)GAT(0.0)PT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SP1 81319.2 24 6 1269.1 160.02 HUMAN 1 11.4045 20.6662 ATDDQFESPKKKFKF-p Q5T5P2;S1568-p ATDDQFESPKKKFKF 0.0803720979301374 0.00348664909955835 -0.393666666666667 -0.685333333333333 23.3801407334548 36.7338008312301 -0.393666666666667 -0.685333333333333 0.00459183132731686 0.000212138706710821 -4.64487182308769 -8.75494200849375 Q5T5P2 KIAA1217 Q5T5P2.S1568.p_KIAA1217 Q5T5P2_S1568s _1_1_1568_1568 Q5T5P2 Q5T5P2|Q5T5P2-3 Sickle tail protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10595.10595.3 7.87 7.87 1.353 2 1 1 0 778.7211 2254.1806 S1568s TMT10 1558 (K) GEDATDDQFEsPKK (K) GEDAT(0.0)DDQFES(0.99)PKK K:TMT10,s:Phosphorylated S KIAA1217 214739.6 2 15 303.1 376.04 HUMAN 1 -23.3801 -36.7338 ATDEDMQSLASLMSM-p Q8NDI1;S171-p ATDEDMQSLASLMSM 0.17368064594083 0.125730596827067 -0.302666666666667 0.191 15.1487523848661 11.8759293551137 -0.302666666666667 0.191 0.03055798838694 0.0649242684019413 -2.9063966481668 2.30920887892992 Q8NDI1 EHBP1 Q8NDI1.S171.p_EHBP1 Q8NDI1_S171s _1_1_171_171 Q8NDI1 Q8NDI1|Q8NDI1-2|Q8NDI1-3 EH domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26852.26852.3 15.51 15.51 3.706 4 1 1 0 947.1337 2759.4233 S171s TMT10 161 (R) EGKATDEDMQsLASLMSMK (Q) EGKAT(0.0)DEDMQS(0.99)LAS(0.0)LMS(0.0)MK K:TMT10,s:Phosphorylated S EHBP1 140642.4 6 1 285.1 385.52 HUMAN 1 -15.1488 11.8759 ATDITADSSSEFSEE-p Q6ZUT1-2;S184-p ATDITADSSSEFSEE 0.174605593500597 0.350813017811857 0.321 0.138 15.0962811290492 6.03121279287556 0.321 0.138 0.0309294279099551 0.249389819395819 2.8965283612799 1.28981366363435 Q6ZUT1 C11orf57 Q6ZUT1.2.S184.p_C11orf57 Q6ZUT1-2_S184s _1_1_184_184 Q6ZUT1-2 Q6ZUT1-2 Isoform 2 of Uncharacterized protein NKAPD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13206.13206.3 18.33 16.35 1.321 9 1 1 0 1005.4701 2934.4216 S184s TMT10 176 (K) EATDITADsSSEFSEETGASGTRK (G) EAT(0.0)DIT(0.0)ADS(0.99)S(0.0)S(0.0)EFS(0.0)EET(0.0)GAS(0.0)GT(0.0)RK K:TMT10,s:Phosphorylated S NKAPD1 34196.3 2 7 1271.1 159.85 HUMAN 1 15.0963 6.0312 ATDQEDCSDQDLAGT-p O75128-2;S522-p ATDQEDCSDQDLAGT 0.603447470538851 0.435754714589015 -0.076 0.0813333333333334 4.05053733506722 4.80678287164215 -0.076 0.0813333333333334 0.393501386102461 0.33061435993773 -0.926777608970369 1.06831924176306 O75128 COBL O75128.2.S522.p_COBL O75128-2_S522s _1_1_522_522 O75128-2 O75128-2|O75128-7|O75128-3 Isoform 2 of Protein cordon-bleu HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18128.18128.5 21.26 21.26 4.617 4 1 1 0 816.4073 3998.0259 S522s TMT10 510 (K) YKDKWATDQEDCsDQDLAGTPDLGPQK (S) Y(0.0)KDKWAT(0.0)DQEDCS(0.99)DQDLAGT(0.0)PDLGPQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S COBL 144838.3 7 11 254.1 405.31 HUMAN 1 -4.0505 4.8068 ATDSRGHSPAFLQPQ-p Q9UHN6;S10-p ATDSRGHSPAFLQPQ 0.565542338330758 0.0193470468859547 0.137666666666667 -0.394333333333333 4.56130663687381 23.5407557104448 0.137666666666667 -0.394333333333333 0.349839896871881 0.00442511364808735 1.02301438907339 -4.67803832378208 Q9UHN6 TMEM2 Q9UHN6.S10.p_TMEM2 Q9UHN6_S10s _1_1_10_10 Q9UHN6 Q9UHN6|Q9UHN6-2|F5H6B2 Cell surface hyaluronidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8585.8585.3 17.52 17.52 13.576 2 1 1 0 640.3102 1838.9459 S10s TMT10 8 (R) GHsPAFLQPQNGNSR (H) GHS(0.99)PAFLQPQNGNS(0.0)R s:Phosphorylated S TMEM2 155797.2 1 1 4468.1 30.96 HUMAN 1 4.5613 -23.5408 ATEKKAVTPAPPIKR-p O95182;T96-p ATEKKAVTPAPPIKR 0.830680447880338 0.00272422972588299 -0.044 -0.68 1.55107686505086 38.9549703541338 -0.044 -0.68 0.699668486553955 0.000127204643331589 -0.40691835847451 -9.67111287316906 O95182 NDUFA7 O95182.T96.p_NDUFA7 O95182_T96t _1_1_96_96 O95182 O95182|M0R0N0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13507.13507.3 10.8 10.8 99 1 1 1 0 597.0364 1709.1292 T96t TMT10 93 (K) KAVtPAPPIK (R) KAVT(1.0)PAPPIK K:TMT10,t:Phosphorylated T NDUFA7 12608.2 2 1 5768.1 16.45 HUMAN 1 -1.5511 -38.955 ATEQQRKSPQPVPLS-p Q13356-2;S495-p ATEQQRKSPQPVPLS 0.332547391355186 0.692121282207408 0.161333333333333 0.0423333333333334 8.9270074583473 2.19293462180355 0.161333333333333 0.0423333333333334 0.12802631761061 0.603540666067291 1.79572741773635 0.551050882747044 Q13356 PPIL2 Q13356.2.S495.p_PPIL2 Q13356-2_S495s _1_1_495_495 Q13356-2 Q13356-2 Isoform 2 of Peptidyl-prolyl cis-trans isomerase-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15509.15509.4 9.39 4.57 1.517 4 1 1 0 818.9329 3192.7352 S495s TMT10 483 (K) YINPAATEQQRKsPQPVPLSPCPR (R) Y(0.0)INPAAT(0.0)EQQRKS(0.99)PQPVPLS(0.0)PCPR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PPIL2 59970.6 2 1 6803.1 9.39 HUMAN 1 8.927 2.1929 ATESGAQSAPLPMEG-p Q02790;S15-p ATESGAQSAPLPMEG 0.876258591121638 0.0206907854655544 0.0243333333333333 0.497 1.12498316563775 23.0435668370228 0.0243333333333333 0.497 0.771794507251653 0.00496184640306423 0.304941850200239 4.55961490226922 Q02790 FKBP4 Q02790.S15.p_FKBP4 Q02790_S15s _1_1_15_15 Q02790 Q02790|F5H120 Peptidyl-prolyl cis-trans isomerase FKBP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24130.24130.4 18.78 18.78 2.486 4 1 1 0 906.2205 3541.9027 S15s TMT10 8 (K) ATESGAQsAPLPMEGVDISPKQDEGVLK (V) AT(0.0)ES(0.0)GAQS(0.99)APLPMEGVDIS(0.0)PKQDEGVLK K:TMT10,s:Phosphorylated S FKBP4 52088.9 3 2 706.1 239.22 HUMAN 1 1.125 23.0436 ATESVPCSPSPLAGE-p Q8N9M1;S124-p ATESVPCSPSPLAGE 0.5571278144748 0.555201351683552 0.0826666666666667 -0.0596666666666666 4.68997449583621 3.44297401446783 0.0826666666666667 -0.0596666666666666 0.339627267062909 0.452587545368306 1.04692521189606 -0.808911101150957 Q8N9M1 C19orf47 Q8N9M1.S124.p_C19orf47 Q8N9M1_S124s _1_1_124_124 Q8N9M1 Q8N9M1|Q8N9M1-2 Uncharacterized protein C19orf47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14653.14653.4 17.92 17.92 2.494 4 1 1 0 577.54 2227.1702 S124s TMT10 116 (K) AATESVPCsPSPLAGEIRR (G) AAT(0.0)ES(0.0)VPCS(0.99)PS(0.0)PLAGEIRR C:Carbamidomethylation,s:Phosphorylated S C19orf47 44916.7 4 1 1515.1 134.55 HUMAN 1 4.69 -3.443 ATETKKVSHVADTKV-p Q9UNF1;S127-p ATETKKVSHVADTKV 0.404617424404078 0.751199828908856 -0.155333333333333 0.045 7.25575535306662 1.71633718646919 -0.155333333333333 0.045 0.188115449520088 0.67354448016319 -1.50571174394904 0.44497530891527 Q9UNF1 MAGED2 Q9UNF1.S127.p_MAGED2 Q9UNF1_S127s _1_1_127_127 Q9UNF1 Q9UNF1|Q9UNF1-2|Q5H909|Q5H907 Melanoma-associated antigen D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6607.6607.3 7.98 7.98 7.982 2 1 1 0 584.6726 1672.0361 S127s TMT10 125 (K) KVsHVADTK (V) KVS(0.99)HVADT(0.0)K K:TMT10,s:Phosphorylated S MAGED2 65124.3 1 7 893.1 204.33 HUMAN 1 -7.2558 1.7163 ATFLRPESGSLPALK-p Q969R2;S141-p ATFLRPESGSLPALK 0.628833772618164 0.0243848864546241 -0.0733333333333333 -0.321666666666667 3.74404345990702 21.970406265145 -0.0733333333333333 -0.321666666666667 0.42227527557057 0.0063527150195991 -0.867875778632439 -4.31061481990504 Q969R2 OSBP2 Q969R2.S141.p_OSBP2 Q969R2_S141s _1_1_141_141 Q969R2 Q969R2|Q969R2-2 Oxysterol-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27496.27496.5 12.28 12.28 1.133 4 1 1 0 768.6528 3759.2616 S141s TMT10 130 (R) AVGSATFLRPEsGSLPALKPLPLLRPGQAK (T) AVGS(0.0)AT(0.0)FLRPES(0.99)GS(0.0)LPALKPLPLLRPGQAK K:TMT10,s:Phosphorylated S OSBP2 102233.9 2 2 3264.1 55.6 HUMAN 1 -3.744 -21.9704 ATGCLPASPSVSLKQ-p O14682;S406-p ATGCLPASPSVSLKQ 0.137325721125408 0.0714251631959645 -0.373333333333333 -0.201666666666667 17.6733101922535 15.2359629723486 -0.373333333333333 -0.201666666666667 0.0170871243811981 0.0299504741921236 -3.39644876211726 -2.92088161106708 O14682 ENC1 O14682.S406.p_ENC1 O14682_S406s _1_1_406_406 O14682 O14682|O14682-2 Ectoderm-neural cortex protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18348.18348.4 22.99 22.99 3.087 6 1 1 0 780.902 3040.6113 S406s TMT10 388 (K) HCLYVVGGHTAATGCLPAsPSVSLK (Q) HCLY(0.0)VVGGHT(0.0)AAT(0.0)GCLPAS(0.99)PS(0.0)VS(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ENC1 67326.8 2 3 3521.2 49.1 HUMAN 1 -17.6733 -15.236 ATGEPGDSSDREPGR-p J3KNZ9;S189-p ATGEPGDSSDREPGR 0.885820345057877 0.00238856624082869 -0.0496666666666667 0.838666666666667 1.03559861058907 40.2282808401064 -0.0496666666666667 0.838666666666667 0.787843831369249 9.48793970199867e-05 -0.282784280452112 10.2345201465178 J3KNZ9 FBRS J3KNZ9.S189.p_FBRS J3KNZ9_S189sS190s_2_2_189_190 J3KNZ9 J3KNZ9 Probable fibrosin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4589.4589.4 10.53 7.44 2.927 5 2 2 0 697.5459 2627.2243 S189s S190s TMT10 177 (R) GGSSGATGEPGDssDREPGRPPGDR (A) GGS(0.0)S(0.0)GAT(0.0)GEPGDS(0.99)S(0.99)DREPGRPPGDR s:Phosphorylated S FBRS 104109.7 2 12 767.1 229.08 HUMAN 1 -1.0356 40.2283 ATGIPLESDEDSNDN-p Q9Y4E8;S961-p ATGIPLESDEDSNDN 0.295108437438978 0.0622997837579997 0.162 0.249333333333333 9.99574720582477 16.0433998809543 0.162 0.249333333333333 0.100097972166118 0.0248690967500409 1.98097160475311 3.07434832396514 Q9Y4E8 USP15 Q9Y4E8.S961.p_USP15 Q9Y4E8_S961sS965s_2_2_961_965 Q9Y4E8 Q9Y4E8|Q9Y4E8-3|Q9Y4E8-2 Ubiquitin carboxyl-terminal hydrolase 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17792.17792.3 23.88 24.09 7.509 5 2 2 0 1285.4891 3678.5241 S961s S965s M978m TMT10 950 (K) GASAATGIPLEsDEDsNDNDNDIENENCmHTN (-) GAS(0.0)AAT(0.0)GIPLES(0.99)DEDS(0.99)NDNDNDIENENCM(1.0)HT(0.0)N C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine USP15 113672.2 12 11 1214.1 165.83 HUMAN 1 9.9957 16.0434 ATGQPAGSEDLTKDR-p Q9Y618;S132-p ATGQPAGSEDLTKDR 0.383203138038762 0.695295344652883 0.128333333333333 0.064 7.71072796454851 2.16864406336518 0.128333333333333 0.064 0.169405381929253 0.60692579192202 1.58493582665831 0.545768456419944 Q9Y618 NCOR2 Q9Y618.S132.p_NCOR2 Q9Y618_S132s _1_1_132_132 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35313.35313.4 15.65 15.65 4.514 4 1 1 0 870.7361 3399.9503 S132s TMT10 110 (R) LELLPDPLLRPSPLLATGQPAGsEDLTK (D) LELLPDPLLRPS(0.0)PLLAT(0.0)GQPAGS(0.99)EDLT(0.0)K K:TMT10,s:Phosphorylated S NCOR2 275540.8 1 4 16.1 1053.89 HUMAN 1 7.7107 2.1686 ATGSRSYSPDHRQKK-p Q14241;S151-p ATGSRSYSPDHRQKK 0.228095422318106 0.0283719519740229 0.189333333333333 0.32 12.3361619977745 20.9578486678997 0.189333333333333 0.32 0.0583960941671807 0.00802075283031078 2.39210622485322 4.08354053277053 Q14241 TCEB3 Q14241.S151.p_TCEB3 Q14241_S151s _1_1_151_151 Q14241 Q14241|A0A024RAC6 Elongin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3667.3667.4 14.1 14.1 2.789 3 1 1 0 414.7135 1575.8644 S151s TMT10 149 (R) SYsPDHRQK (K) S(0.0)Y(0.0)S(0.99)PDHRQK K:TMT10,s:Phosphorylated S ELOA 90363.7 12 1 2069.1 99.52 HUMAN 1 12.3362 20.9578 ATGTGTFSPGASPGS-p Q16512-2;S539-p ATGTGTFSPGASPGS 0.485906212659286 0.812767301100662 0.104333333333333 -0.0363333333333333 5.77629719471015 1.26023620745254 0.104333333333333 -0.0363333333333333 0.264466264213693 0.748128809594425 1.24460838492826 -0.337905122925455 Q16512 PKN1 Q16512.2.S539.p_PKN1 Q16512-2_S539sS543s_2_2_539_543 Q16512-2 Q16512-2|Q16512-3 Isoform 2 of Serine/threonine-protein kinase N1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17812.17812.3 12.64 12.64 1.72 6 2 2 0 878.4105 2473.2997 S539s S543s TMT10 527 (R) RLIPNATGTGTFsPGAsPGSEAR (T) RLIPNAT(0.0)GT(0.0)GT(0.0)FS(0.99)PGAS(0.99)PGS(0.0)EAR s:Phosphorylated S PKN1 105469.7 3 11 721.1 237.15 HUMAN 1 5.7763 -1.2602 ATGWEEPSPPSIRRK-p Q9HCJ0-2;S714-p ATGWEEPSPPSIRRK 0.656937444442563 0.623969782265746 0.0856666666666667 -0.049 3.42452001835505 2.78547020605954 0.0856666666666667 -0.049 0.454514767341315 0.526566201039777 0.805393487367421 -0.676400448367418 Q9HCJ0 TNRC6C Q9HCJ0.2.S714.p_TNRC6C Q9HCJ0-2_S714s _1_1_714_714 Q9HCJ0-2 A0A1B0GU24|Q9HCJ0-2 Isoform 2 of Trinucleotide repeat-containing gene 6C protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17419.17629.3 18.11 18.11 4.122 5 1 1 0 718.6583 2073.9926 S714s TMT10 703 (K) DSSEATGWEEPsPPSIR (R) DS(0.0)S(0.0)EAT(0.0)GWEEPS(0.99)PPS(0.0)IR s:Phosphorylated S TNRC6C 179888.3 3 2 1012.1 188.79 HUMAN 1 3.4245 -2.7855 ATHPPPASPSSLVKV-p O43566;S478-p ATHPPPASPSSLVKV 0.149214344489706 0.149576342954881 0.475 -0.16 16.6594595140111 10.8575971521078 0.475 -0.16 0.0215801296038735 0.08208055508773 3.19586006236936 -2.13023371236001 O43566 RGS14 O43566.S478.p_RGS14 O43566_S478s _1_1_478_478 O43566 O43566|O43566-5|O43566-6 Regulator of G-protein signaling 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13510.13510.3 18.5 18.5 2.31 4 1 1 0 643.0194 1847.0791 S478s TMT10 471 (K) ATHPPPAsPSSLVK (V) AT(0.0)HPPPAS(0.99)PS(0.0)S(0.0)LVK K:TMT10,s:Phosphorylated S RGS14 61959.3 1 1 5528.1 18.5 HUMAN 1 16.6595 -10.8576 ATHQRIHTGEKPYEC-p Q8NHY6;T640-p ATHQRIHTGEKPYEC 0.190245661865765 0.00291384335500599 -0.286 -1.016 14.0986327868539 38.2955383260001 -0.286 -1.016 0.038916764053433 0.000148062871383008 -2.71104566222034 -9.39052889259382 Q8NHY6 ZFP28 Q8NHY6.T640.p_ZFP28 Q8NHY6_T640t _1_1_640_640 Q8NHY6 A8MQ14|A0A087X0M6|Q8NHY6|Q86UE3|M0QY24|A0A0A0MSW5|A0A087WVH9|Q9H0M5|Q96MU6|K7EQV7|Q6ECI4|Q96SK3|Q96SK3-3|Q8TAQ5|Q96MU6-2|Q8N7M2|P15621|Q8NDQ6|Q3ZCX4|Q32M78|Q8N972|P15621-3|Q8NDQ6-4|Q6PG37|Q9BX82|P17039-2|Q8NDQ6-2|Q8NEP9|Q9H7R0|Q8NEP9-4|Q6ECI4-2|K7EP39|P15621-2|Q3ZCX4-2|Q8NB42-2|Q6PDB4|Q8N2I2-3|Q8N2I2-4|F8W7T7|Q7Z3V5|Q3KP31|Q96ND8|Q17RW3|Q9UC07|Q8TAF7|A0A087WVP9|Q6P280|Q9H7R0-2|Q9BUY5|Q494X3|A0A087WSV7|Q3KP31-2|B4DRP8|Q8N9K5|Q8TAQ5-2|Q96NI8|Q9UJL9|Q9HCL3|Q147U1|Q8N141|Q8NEP9-2|K7ESH0|Q9Y2G7|Q96NG8|K7ER43|Q3KNS6-3|Q8N2I2-2|C9JN71|Q9ULM2|Q8N9F8|Q8NDP4|Q8N9K5-2|Q14585|Q8NA42|Q96BR6|Q9NQX6|Q8N587|Q8TA94|A0A0C4DFR4|Q6ZSS3|Q8TAF7-2|Q9UJL9-2|Q6ZNG0|Q969W8-2|Q96BR6-2|A0A087WWI3|A0A0C4DG37|Q8N587-2|Q96NI8-2|C9JZC2|A8KAD9|Q3ZCT1|Q96LW9|P58317|A0A1W2PPI4|B4DRR6|A0A087WV02|Q3KNS6-2|Q96LW9-2|Q6ZNG0-2 Zinc finger protein 28 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9381.9381.3 11.51 7.42 5.119 2 1 1 0 710.3739 2049.1406 T640t TMT10 638 (R) IHtGEKPYECK (V) IHT(0.99)GEKPY(0.0)ECK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ZFP28 100871.2 2 107 240.12 415.72 HUMAN 1 -14.0986 -38.2955 ATIKTKRSIQFVDWC-p P68363;S340-p ATIKTKRSIQFVDWC 0.78720766718584 0.147592583261913 0.0446666666666667 0.212 2.00676149648918 10.9390286837191 0.0446666666666667 0.212 0.629975776269893 0.0805558587323647 0.51029890193052 2.14447042577585 P68363 TUBA1B P68363.S340.p_TUBA1B P68363_S340s _1_1_340_340 P68363 P68363|P68366|P68366-2|P68363-2 Tubulin alpha-1B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30977.31184.3 20.51 20.51 20.511 2 1 1 0 708.3525 2043.0774 S340s TMT10 340 (R) sIQFVDWCPTGFK (V) S(0.99)IQFVDWCPT(0.0)GFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TUBA1B 50835.4 9 13 868.1 210.03 HUMAN 1 2.0068 10.939 ATIKTKRTIQFVDWC-p Q71U36;T340-p ATIKTKRTIQFVDWC 0.992509897153069 0.269900184122828 0.00166666666666667 -0.147333333333333 0.0698491457848648 7.48928224943778 0.00166666666666667 -0.147333333333333 0.984045286439766 0.178267336227617 0.0209382883587528 -1.54595898075174 Q71U36 TUBA1A Q71U36.T340.p_TUBA1A Q71U36_T340t _1_1_340_340 Q71U36 F5H5D3|Q71U36|Q13748|Q6PEY2 Tubulin alpha-1A chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29441.29441.3 14 14 5.374 2 1 1 0 636.6389 1827.9301 T340t Hydrogen 340 (R) tIQFVDWCPTGFK (V) T(0.99)IQFVDWCPT(0.0)GFK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T TUBA1A 50819.4 3 17 868.99 210.03 HUMAN 1 0.0698 -7.4893 ATIPRRNTLPAMDNS-p Q9UQC2;T391-p ATIPRRNTLPAMDNS 0.126867028860092 0.0686965950087876 -0.266 -0.228 18.5880845886703 15.4688245662817 -0.266 -0.228 0.0138417672133473 0.0283868722544077 -3.5822755919784 -2.96484152285268 Q9UQC2 GAB2 Q9UQC2.T391.p_GAB2 Q9UQC2_T391t _1_1_391_391 Q9UQC2 Q9UQC2|Q9UQC2-2 GRB2-associated-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7099.7099.3 10.84 10.84 10.844 2 1 1 0 528.5898 1503.7899 T391t TMT10 389 (R) RNtLPAMDNSR (L) RNT(0.99)LPAMDNS(0.0)R t:Phosphorylated T GAB2 74969.7 5 8 698.1 241.06 HUMAN 1 -18.5881 -15.4688 ATKAVHISNPKTAEF-p Q9NSD9;S440-p ATKAVHISNPKTAEF 0.63378091608585 0.891386112917854 -0.0686666666666667 -0.0156666666666667 3.68755975816305 0.701142851705634 -0.0686666666666667 -0.0156666666666667 0.427803195449804 0.850914089563017 -0.856914457755798 -0.197117613978677 Q9NSD9 FARSB Q9NSD9.S440.p_FARSB Q9NSD9_S440s _1_1_440_440 Q9NSD9 Q9NSD9|Q9NSD9-2 Phenylalanine--tRNA ligase beta subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10219.10219.3 8.1 8.1 99 1 1 1 0 468.5988 1323.8149 S440s TMT10 436 (K) AVHIsNPK (T) AVHIS(1.0)NPK K:TMT10,s:Phosphorylated S FARSB 66742 1 2 5386.1 19.8 HUMAN 1 -3.6876 -0.7011 ATKENDSSEEVDVFQ-p Q9NTI5;S1407-p ATKENDSSEEVDVFQ 0.413312492292849 0.0140943537235631 0.125333333333333 0.410333333333333 7.07606532037952 25.6676663726592 0.125333333333333 0.410333333333333 0.19606201781535 0.00271164831095893 1.47432158668468 5.20816021142916 Q9NTI5 PDS5B Q9NTI5.S1407.p_PDS5B Q9NTI5_S1406sS1407s_2_2_1406_1407 Q9NTI5 Q9NTI5 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25152.25152.4 23.57 23.57 2.331 8 2 2 0 1286.0807 4981.3598 S1406s S1407s TMT10 1398 (K) QAATKENDssEEVDVFQGSSPVDDIPQEETEEEEVSTVNVR (R) QAAT(0.0)KENDS(0.99)S(0.99)EEVDVFQGS(0.0)S(0.0)PVDDIPQEET(0.0)EEEEVS(0.0)T(0.0)VNVR K:TMT10,s:Phosphorylated S PDS5B 165919.5 9 24 100.1 597.99 HUMAN 1 7.0761 25.6677 ATKGTVNTEEKRKHI-p P49756;T731-p ATKGTVNTEEKRKHI 0.546775061594564 0.00955532730547102 0.111 -0.519333333333333 4.8402776385942 28.4916214156604 0.111 -0.519333333333333 0.328074319094772 0.00141526529943699 1.07470521153179 -5.97715129762543 P49756 RBM25 P49756.T731.p_RBM25 P49756_T731t _1_1_731_731 P49756 P49756 RNA-binding protein 25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6404.6404.2 10.94 3.79 3.252 2 1 1 0 708.3638 1335.752 T731t TMT10 727 (K) GTVNtEEK (R) GT(0.0)VNT(0.99)EEK K:TMT10,t:Phosphorylated T RBM25 100526.1 1 5 353.1 350.09 HUMAN 1 4.8403 -28.4916 ATKIAVHSPKISQRR-p Q9NXL9;S952-p ATKIAVHSPKISQRR 0.904021620863801 0.00398226423556043 -0.023 -0.762333333333333 0.861944497554979 35.3781581450617 -0.023 -0.762333333333334 0.819984324716591 0.000289857261974913 -0.238880897567876 -8.23447370447606 Q9NXL9 MCM9 Q9NXL9.S952.p_MCM9 Q9NXL9_S952s _1_1_952_952 Q9NXL9 Q9NXL9|Q9NXL9-4 DNA helicase MCM9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8403.8403.3 12.47 12.47 99 1 1 1 0 430.5841 1209.772 S952s TMT10 948 (K) IAVHsPK (I) IAVHS(1.0)PK K:TMT10,s:Phosphorylated S MCM9 128793.8 2 4 1757.1 117.14 HUMAN 1 -0.8619 -35.3782 ATKIPCESPPLEVVD-p P46013;S2708-p ATKIPCESPPLEVVD 0.143072165522907 0.215920981246363 0.345333333333333 -0.203666666666667 17.2508694834827 8.76061775801547 0.345333333333333 -0.203666666666667 0.0188327200944371 0.133026518222612 3.31221017334399 -1.76630856047818 P46013 MKI67 P46013.S2708.p_MKI67 P46013_S2708s _1_1_2708_2708 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21677.21677.3 21.68 21.68 6.16 6 1 1 0 1004.5383 2931.6316 S2708s TMT10 2701 (K) ATKIPCEsPPLEVVDTTASTK (R) AT(0.0)KIPCES(0.99)PPLEVVDT(0.0)T(0.0)AS(0.0)T(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MKI67 360912.4 8 91 5.1 1918.46 HUMAN 1 17.2509 -8.7606 ATKLQNGSPLPERAH-p Q6N021;S38-p ATKLQNGSPLPERAH 0.281389310516278 0.0620384320045902 0.226 -0.264666666666667 10.4135543947568 16.0716294696987 0.226 -0.264666666666667 0.090916887730092 0.0247079692989275 2.05365961137101 -3.07976775721737 Q6N021 TET2 Q6N021.S38.p_TET2 Q6N021_S38s _1_1_38_38 Q6N021 E7EQS8|Q6N021|Q6N021-3|E7EPB1 Methylcytosine dioxygenase TET2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10950.10950.2 10.84 10.84 99 1 1 1 0 710.3641 1339.7531 S38s TMT10 34 (K) LQNGsPLPER (A) LQNGS(1.0)PLPER s:Phosphorylated S TET2 226374.6 1 3 594.1 264.06 HUMAN 1 10.4136 -16.0716 ATKNRVPSAGDVEKA-p Q15785;S186-p ATKNRVPSAGDVEKA 0.0629683487287699 0.0093584055964361 -0.413 -0.444333333333333 26.0583344209403 28.6360850432734 -0.413 -0.444333333333333 0.00247837236527678 0.0013689623235038 -5.31691163246584 -6.01867264650277 Q15785 TOMM34 Q15785.S186.p_TOMM34 Q15785_S186s _1_1_186_186 Q15785 Q15785 Mitochondrial import receptor subunit TOM34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8687.8687.2 7.57 7.57 99 1 1 1 0 855.452 1629.9324 S186s TMT10 182 (K) NRVPsAGDVEK (A) NRVPS(1.0)AGDVEK K:TMT10,s:Phosphorylated S TOMM34 34958.1 6 3 4280.1 34.32 HUMAN 1 -26.0583 -28.6361 ATKPMAESPKNGGDV-p Q9Y6X8;S719-p ATKPMAESPKNGGDV 0.205247820557502 0.451537102009489 -0.386666666666667 -0.072 13.298893331853 4.60163596523446 -0.386666666666667 -0.072 0.0467854344629659 0.346606261041451 -2.5650679942219 -1.03032783704855 Q9Y6X8 ZHX2 Q9Y6X8.S719.p_ZHX2 Q9Y6X8_S719s _1_1_719_719 Q9Y6X8 Q9Y6X8 Zinc fingers and homeoboxes protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15828.15828.4 16.51 12.08 2.213 4 1 1 0 819.9437 3196.7846 S719s TMT10 712 (K) ATKPMAEsPKNGGDVVPQYYK (D) AT(0.0)KPMAES(0.99)PKNGGDVVPQY(0.0)Y(0.0)K K:TMT10,s:Phosphorylated S ZHX2 92990 4 2 2740.1 72.17 HUMAN 1 -13.2989 -4.6016 ATKQKVLSPPHIKAD-p Q9NZ09-4;S210-p ATKQKVLSPPHIKAD 0.0511487796737011 0.00439924228831388 -0.546 -0.746 28.2954539313932 34.6250749599046 -0.546 -0.746 0.00148065748654023 0.000344740656244332 -5.9298152407006 -7.95720557985792 Q9NZ09 UBAP1 Q9NZ09.4.S210.p_UBAP1 Q9NZ09-4_S210s _1_1_210_210 Q9NZ09-4 Q9NZ09-4|Q9NZ09-3|Q9NZ09-2 Isoform 4 of Ubiquitin-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17646.17646.3 13.03 13.03 99 1 1 1 0 476.9517 1348.8717 S210s TMT10 208 (K) VLsPPHIK (A) VLS(1.0)PPHIK K:TMT10,s:Phosphorylated S UBAP1 62528.6 3 1 4656.1 28.31 HUMAN 1 -28.2955 -34.6251 ATKQSNASSDVEVEE-p O75475;S105-p ATKQSNASSDVEVEE 0.466667919827382 0.140953168621393 -0.145 0.204 6.10824305879628 11.2131093102645 -0.145 0.204 0.245005421243711 0.075629123810457 -1.30382331706343 2.19247650651964 O75475 PSIP1 O75475.S105.p_PSIP1 O75475_S105sS106s_2_2_105_106 O75475 O75475|O75475-2|O75475-3 PC4 and SFRS1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12947.12947.5 15.18 15.18 2.507 7 2 2 0 823.3883 3952.9917 S105s S106s TMT10 101 (K) QSNAssDVEVEEKETSVSKEDTDHEEK (A) QS(0.0)NAS(0.99)S(0.99)DVEVEEKET(0.0)S(0.0)VS(0.0)KEDT(0.0)DHEEK K:TMT10,s:Phosphorylated S PSIP1 60216.3 10 13 382.1 334.17 HUMAN 1 -6.1082 11.2131 ATKVARKSAPATGGV-p Q16695;S29-p ATKVARKSAPATGGV 0.254584876035909 0.214433477485812 -0.469333333333333 -0.249666666666667 11.3085308440258 8.79699855935044 -0.469333333333333 -0.249666666666667 0.0739855515244168 0.131916811023693 -2.21025218804778 -1.77260107249462 Q16695 HIST3H3 Q16695.S29.p_HIST3H3 Q16695_S29s _1_1_29_29 Q16695 P68431|Q71DI3|Q5TEC6|Q16695 Histone H3.1t HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7719.7719.2 11.23 11.23 2.584 2 1 1 0 663.3658 1245.7567 S29s TMT10 29 (K) sAPATGGVK (K) S(0.99)APAT(0.0)GGVK K:TMT10,s:Phosphorylated S HIST3H3 15622.1 4 2 4540.1 30.11 HUMAN 1 -11.3085 -8.797 ATLARELSDLHSKYS-p K7EKI0;S1196-p ATLARELSDLHSKYS 0.767303528557655 0.715310489505581 -0.0846666666666667 0.0353333333333334 2.20304059440157 2.00180476096899 -0.0846666666666667 0.0353333333333334 0.602137868053796 0.630695197328204 -0.553311682684709 0.509142547227056 K7EKI0 EVPL K7EKI0.S1196.p_EVPL K7EKI0_S1196s _1_1_1196_1196 K7EKI0 K7EKI0|Q92817 Envoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10761.10761.3 12.41 2.2 5.071 2 1 1 0 489.5938 1386.7993 S1196s TMT10 1194 (R) ELsDLHSK (Y) ELS(0.99)DLHS(0.0)K K:TMT10,s:Phosphorylated S EVPL 235195.7 1 7 1436.1 142.57 HUMAN 1 -2.203 2.0018 ATLARRDSLQKPGLE-p Q9NRM7;S380-p ATLARRDSLQKPGLE 0.945040292617231 0.089337815622274 -0.0113333333333333 -0.193666666666667 0.481864140720371 13.8795249625809 -0.0113333333333333 -0.193666666666667 0.894980526784103 0.0409305427685553 -0.138331550038703 -2.6692410780839 Q9NRM7 LATS2 Q9NRM7.S380.p_LATS2 Q9NRM7_S380s _1_1_380_380 Q9NRM7 Q9NRM7 Serine/threonine-protein kinase LATS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10541.10541.3 12.48 12.48 99 1 1 1 0 701.3909 2022.186 S380s TMT10 378 (R) RDsLQKPGLEAPPR (A) RDS(1.0)LQKPGLEAPPR K:TMT10,s:Phosphorylated S LATS2 121046.5 3 14 824.2 217.64 HUMAN 1 -0.4819 -13.8795 ATLKKQPSHMEAAHF-p O43572;S96-p ATLKKQPSHMEAAHF 0.330275298399303 0.766470431155622 0.151333333333333 0.056 8.99244637903265 1.5954046176958 0.151333333333333 0.056 0.126111694781416 0.692563402607302 1.80705523676281 0.417167644242722 O43572 AKAP10 O43572.S96.p_AKAP10 O43572_S96s _1_1_96_96 O43572 O43572|E7EMD6 A-kinase anchor protein 10, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10222.10222.4 10.1 10.1 99 1 1 1 0 580.5428 2239.1806 S96s TMT10 93 (K) KQPsHMEAAHFGDLGR (S) KQPS(1.0)HMEAAHFGDLGR K:TMT10,s:Phosphorylated S AKAP10 74273.3 1 3 1844.1 111.39 HUMAN 1 8.9924 1.5954 ATLKKTDSCDSGITK-p O95259;S879-p ATLKKTDSCDSGITK 0.246495783528647 0.601514725038914 -0.207666666666667 -0.054 11.6368968105188 2.99331738169766 -0.207666666666667 -0.054 0.0685978207353586 0.501959018955441 -2.26809080529753 -0.718953877921502 O95259 KCNH1 O95259.S879.p_KCNH1 O95259_S879s _1_1_879_879 O95259 O95259|Q8NCM2|O95259-2 Potassium voltage-gated channel subfamily H member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8203.8203.3 11.78 6.84 2.238 4 1 1 0 660.3424 1899.046 S879s TMT10 876 (K) KTDsCDSGITK (S) KT(0.0)DS(0.99)CDS(0.0)GIT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S KCNH1 112504.8 1 1 2720.1 72.93 HUMAN 1 -11.6369 -2.9933 ATLRRAKSFTCSEKP-p Q96PE2;S546-p ATLRRAKSFTCSEKP 0.331321380439187 0.827788801741785 0.176333333333333 0.0286666666666667 8.96243088716214 1.14900963909231 0.176333333333333 0.0286666666666667 0.126986312264492 0.767536497682258 1.80185933365216 0.310818040599232 Q96PE2 ARHGEF17 Q96PE2.S546.p_ARHGEF17 Q96PE2_S546s _1_1_546_546 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10111.10111.4 12.01 12.01 12.005 3 1 1 0 570.8008 2200.2185 S546s TMT10 544 (R) AKsFTCSEKPMAR (R) AKS(0.99)FT(0.0)CS(0.0)EKPMAR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ARHGEF17 223779.6 6 19 30.1 908.19 HUMAN 1 8.9624 1.149 ATLSRTPSQEQLIAE-p A0A1B0GTU4;S609-p ATLSRTPSQEQLIAE 0.57811812524001 0.40432670661899 0.132333333333333 0.126666666666667 4.37787748887672 5.23339349618537 0.132333333333333 0.126666666666667 0.364932255321694 0.299681994460203 0.988706515510143 1.14642081725577 A0A1B0GTU4 NotFound A0A1B0GTU4.S609.p_NotFound A0A1B0GTU4_S609s _1_1_609_609 A0A1B0GTU4 A0A1B0GTU4|A0A1B0GU60 Paxillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23195.23195.3 16.33 16.33 1.288 2 1 1 0 626.9897 1798.986 S609s TMT10 607 (R) TPsQEQLIAELQGR (L) T(0.0)PS(0.99)QEQLIAELQGR s:Phosphorylated S PXN 117843.4 1 13 288.1 382.57 HUMAN 1 4.3779 5.2334 ATMETSRSPSPQFAP-p Q13796;S1171-p ATMETSRSPSPQFAP 0.824903873569325 0.294539558651008 -0.0336666666666667 0.114333333333333 1.61264541668829 7.00872350013639 -0.0336666666666667 0.114333333333333 0.689819486300392 0.199125853355762 -0.42120185276882 1.46213567004124 Q13796 SHROOM2 Q13796.S1171.p_SHROOM2 Q13796_S1171sS1173s_2_2_1171_1173 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25471.25471.5 13.87 11.15 1.119 9 2 2 0 975.7037 4714.5329 S1171s S1173s TMT10 1161 (R) LQTATMETSRsPsPQFAPQKLTDKPPLLIQDEDSTR (I) LQT(0.0)AT(0.0)MET(0.0)S(0.0)RS(0.99)PS(0.99)PQFAPQKLT(0.0)DKPPLLIQDEDS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S SHROOM2 177605.1 4 31 90.1 622.62 HUMAN 1 -1.6126 7.0087 ATMKGSSSASIVKGQ-p Q14126;S701-p ATMKGSSSASIVKGQ 0.431420516711443 0.813861572663139 0.119333333333333 -0.0353333333333333 6.72207421203904 1.25258867535523 0.119333333333333 -0.0353333333333333 0.212712287887562 0.749447357183842 1.41227058522915 -0.33605595943478 Q14126 DSG2 Q14126.S701.p_DSG2 Q14126_S701s _1_1_701_701 Q14126 Q14126 Desmoglein-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9729.9729.2 12.56 12.56 1.318 4 1 1 0 687.3764 1293.7778 S701s TMT10 698 (K) GSSsASIVK (G) GS(0.0)S(0.0)S(0.99)AS(0.0)IVK K:TMT10,s:Phosphorylated S DSG2 123090.5 4 2 494.1 293.66 HUMAN 1 6.7221 -1.2526 ATMLIHSSEEEEDED-p Q16825;S711-p ATMLIHSSEEEEDED 0.152381872383781 0.0318082035389879 0.292666666666667 0.400666666666667 16.4414057467016 20.2183023200324 0.292666666666667 0.400666666666667 0.0226913024925796 0.00950976462707933 3.15341030020369 3.92223636712493 Q16825 PTPN21 Q16825.S711.p_PTPN21 Q16825_S710sS711s_2_2_710_711 Q16825 Q16825 Tyrosine-protein phosphatase non-receptor type 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23332.23332.3 20.71 20.71 8.219 6 2 2 0 1144.4597 3271.427 S710s S711s TMT10 700 (K) SLSDATMLIHssEEEEDEDFEEESGAR (A) S(0.0)LS(0.0)DAT(0.0)MLIHS(0.99)S(0.99)EEEEDEDFEEES(0.0)GAR s:Phosphorylated S PTPN21 134191.5 1 16 762.1 229.75 HUMAN 1 16.4414 20.2183 ATNAACASLLKKKQG-p Q92882;S187-p ATNAACASLLKKKQG 0.955641444333664 0.390163819398555 0.00933333333333332 0.0943333333333333 0.387595674383663 5.43507447845536 0.00933333333333334 0.0943333333333334 0.914619449691366 0.286083329892345 0.112319092197869 1.18296695665991 Q92882 OSTF1 Q92882.S187.p_OSTF1 Q92882_S187s _1_1_187_187 Q92882 Q92882 Osteoclast-stimulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30024.30024.3 21.96 18.84 6.642 2 1 1 0 745.7153 2155.1656 S187s TMT10 175 (K) LAFDMATNAACAsLLK (K) LAFDMAT(0.0)NAACAS(0.99)LLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S OSTF1 23957.5 7 2 2391.1 85.48 HUMAN 1 0.3876 5.4351 ATNNMNLSRSSSDNN-p A0A087X2H1;S1571-p ATNNMNLSRSSSDNN 0.636854133601066 0.687715112562794 0.075 -0.0446666666666667 3.65422189229066 2.22620155023328 0.075 -0.0446666666666666 0.431099789477088 0.598935209979674 0.850428465831967 -0.558265446747625 A0A087X2H1 NotFound A0A087X2H1.S1571.p_NotFound A0A087X2H1_S1571s _1_1_1571_1571 A0A087X2H1 A0A087X2H1|Q9ULT8 E3 ubiquitin-protein ligase HECTD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7367.7367.3 8.44 8.44 4.205 3 1 1 0 515.5747 1464.7426 S1571s TMT10 1562 (R) TNATNNMNLsR (S) T(0.0)NAT(0.0)NNMNLS(0.99)R s:Phosphorylated S HECTD1 292594.4 1 13 365.1 342.23 HUMAN 1 3.6542 -2.2262 ATPAPAGTPGPILIP-p Q86Y97;T422-p ATPAPAGTPGPILIP 0.769192567611738 0.429291214097477 0.0596666666666667 -0.089 2.18421793435323 4.88963523074222 0.0596666666666667 -0.089 0.604753243853108 0.324366860175363 0.549222679721086 -1.08357892084754 Q86Y97 SUV420H2 Q86Y97.T422.p_SUV420H2 Q86Y97_T416tT422t_2_2_416_422 Q86Y97 Q86Y97|A0A0D9SF94 Histone-lysine N-methyltransferase KMT5C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31470.31470.3 10.18 10.18 99 2 2 2 0 889.1537 2505.5209 T416t T422t TMT10 409 (R) LAPAPPAtPAPAGtPGPILIPK (Q) LAPAPPAT(1.0)PAPAGT(1.0)PGPILIPK K:TMT10,t:Phosphorylated T KMT5C 53024.9 1 4 4390.1 32.15 HUMAN 1 2.1842 -4.8896 ATPERRGSLPDTGWK-p O75096;S1887-p ATPERRGSLPDTGWK 0.274203367926357 0.0263100552871134 0.168 0.415 10.6389015838582 21.4719206856725 0.168 0.415 0.0863196839614773 0.00712537837568624 2.09296173642188 4.1979020127216 O75096 LRP4 O75096.S1887.p_LRP4 O75096_S1887s _1_1_1887_1887 O75096 O75096 Low-density lipoprotein receptor-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13381.13381.3 10.54 10.54 4.864 2 1 1 0 552.2961 1574.9055 S1887s TMT10 1885 (R) RGsLPDTGWK (H) RGS(0.99)LPDT(0.0)GWK K:TMT10,s:Phosphorylated S LRP4 217404.3 2 1 4803.1 26.42 HUMAN 1 10.6389 21.4719 ATPGRGDTPGHATPG-p O75533;T273-p ATPGRGDTPGHATPG 0.207422631751664 0.989079974009455 0.381333333333333 -0.00233333333333332 13.1880011012147 0.0716090508823973 0.381333333333333 -0.00233333333333329 0.047995430323277 0.98364659947996 2.54499955350275 -0.0214596442546298 O75533 SF3B1 O75533.T273.p_SF3B1 O75533_T267tT273tT278t_3_3_267_278 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11893.11893.5 17.57 17.57 1.224 9 3 3 0 803.9568 3775.8487 T267t T273t T278t TMT10 253 (K) IWDPTPSHTPAGAAtPGRGDtPGHAtPGHGGATSSAR (K) IWDPT(0.0)PS(0.0)HT(0.0)PAGAAT(0.99)PGRGDT(0.99)PGHAT(0.99)PGHGGAT(0.0)S(0.0)S(0.0)AR t:Phosphorylated T SF3B1 146569.5 2 46 53.1 735.77 HUMAN 1 13.188 -0.0716 ATPKLDSSPSVSSTL-p E7ETY2;S1228-p ATPKLDSSPSVSSTL 0.335645436336162 0.00957046944143617 -0.216 0.488333333333333 8.84376338958083 28.4774430634946 -0.216 0.488333333333333 0.130503951278508 0.00141989324686521 -1.78131794384247 5.97308819372945 E7ETY2 TCOF1 E7ETY2.S1228.p_TCOF1 E7ETY2_S1228s _1_1_1228_1228 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19052.19052.2 13.9 13.9 1.129 6 1 1 0 951.0033 1821.037 S1228s TMT10 1225 (K) LDSsPSVSSTLAAK (D) LDS(0.0)S(0.99)PS(0.0)VS(0.0)S(0.0)T(0.0)LAAK K:TMT10,s:Phosphorylated S TCOF1 152529.5 20 29 19.1 1034.65 HUMAN 1 -8.8438 28.4774 ATPLDFPSKKRKRSR-p Q15637-6;S14-p ATPLDFPSKKRKRSR 0.659595024833796 0.664284649691318 0.0746666666666667 -0.05 3.38776626973677 2.43188104851785 0.0746666666666667 -0.05 0.458377585914388 0.571231167196791 0.798129198697727 -0.602378933087099 Q15637 SF1 Q15637.6.S14.p_SF1 Q15637-6_S14s _1_1_14_14 Q15637-6 Q15637|Q15637-2|Q15637-3|Q15637-6|Q15637-4|F8WEV5 Isoform 6 of Splicing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23189.23189.3 8.86 8.86 3.14 3 1 1 0 580.9514 1660.8744 S14s Acetyl 2 (M) ATGANATPLDFPsK (K) AT(0.0)GANAT(0.0)PLDFPS(0.99)K K:TMT10,s:Phosphorylated S SF1 62173.2 2 3 1138.1 173.35 HUMAN 1 3.3878 -2.4319 ATPSRKRSVAVSDEE-p Q9Y6X9;S739-p ATPSRKRSVAVSDEE 0.572361188305731 0.919480756983043 0.214666666666667 0.0756666666666667 4.46363071411993 0.514056576261603 0.214666666666667 0.0756666666666667 0.357797192573111 0.888370937372272 1.00477876324988 0.147096345374807 Q9Y6X9 MORC2 Q9Y6X9.S739.p_MORC2 Q9Y6X9_S739sS743s_2_2_739_743 Q9Y6X9 Q9Y6X9|Q9Y6X9-2 MORC family CW-type zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.12835.12835.3 10.38 10.38 99 2 2 2 0 827.3646 2320.1466 S739s S743s Hydrogen 739 (R) sVAVsDEEEVEEEAERRK (E) S(1.0)VAVS(1.0)DEEEVEEEAERRK K:TMT10-Lys-Only,s:Phosphorylated S MORC2 118619.8 1 13 309.1 372.4 HUMAN 1 4.4636 0.5141 ATPTAAESSEGEGEE-p Q96S55;S91-p ATPTAAESSEGEGEE 0.171396449036957 0.105884342572034 0.305666666666667 0.228666666666667 15.2467773492311 12.8831240465641 0.305666666666667 0.228666666666667 0.0298759872260242 0.0514858154151919 2.9248638938864 2.4886768937809 Q96S55 WRNIP1 Q96S55.S91.p_WRNIP1 Q96S55_S91sS92s_2_2_91_92 Q96S55 Q96S55|Q96S55-2 ATPase WRNIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15719.15923.5 31.61 31.61 5.526 13 2 2 0 1091.8844 5295.4573 S91s S92s TMT10 74 (R) LSESSALKQPATPTAAEssEGEGEEGDDGGETESRESYDAPPTPSGAR (L) LS(0.0)ES(0.0)S(0.0)ALKQPAT(0.0)PT(0.0)AAES(0.99)S(0.99)EGEGEEGDDGGET(0.0)ES(0.0)RES(0.0)Y(0.0)DAPPT(0.0)PS(0.0)GAR K:TMT10,s:Phosphorylated S WRNIP1 72873.4 10 7 519.1 284.6 HUMAN 1 15.2468 12.8831 ATPTPALSPGRSLRP-p O14559;S827-p ATPTPALSPGRSLRP 0.332959231263369 0.998930692851135 0.168 0.000333333333333334 8.91553431500015 0.00681582006629441 0.168 0.000333333333333346 0.128364983257953 0.998431830296963 1.79374140351753 0.00205763523554984 O14559 ARHGAP33 O14559.S827.p_ARHGAP33 O14559_S827s _1_1_827_827 O14559 O14559|O14559-10 Rho GTPase-activating protein 33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.37317.37317.4 28.81 28.81 1.12 9 1 1 0 1185.1328 4657.529 S827s TMT10 783 (R) GPTSPASPAALDISEPLAVSVPPAVLELLGAGGAPASATPTPALsPGR (S) GPT(0.0)S(0.0)PAS(0.0)PAALDIS(0.0)EPLAVS(0.0)VPPAVLELLGAGGAPAS(0.0)AT(0.0)PT(0.0)PALS(0.99)PGR s:Phosphorylated S ARHGAP33 138523 2 3 3099.1 60.69 HUMAN 1 8.9155 0.0068 ATPVQLPSPPCTSSP-p Q14686;S1745-p ATPVQLPSPPCTSSP 0.988354117570233 0.399231096267553 0.00233333333333333 0.0796666666666667 0.10469806099271 5.30312978723273 0.00233333333333333 0.0796666666666667 0.976180648079521 0.294908317397689 0.031262832019265 1.15908295490681 Q14686 NCOA6 Q14686.S1745.p_NCOA6 Q14686_S1745s _1_1_1745_1745 Q14686 Q14686 Nuclear receptor coactivator 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22141.22141.3 24.91 22.02 2.483 6 1 1 0 1124.9288 3292.8128 S1745s TMT10 1738 (R) ATPVQLPsPPCTSSPVVPSHPPVQQVK (E) AT(0.0)PVQLPS(0.99)PPCT(0.0)S(0.0)S(0.0)PVVPS(0.0)HPPVQQVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NCOA6 219484.1 4 9 327.1 360.02 HUMAN 1 0.1047 5.3031 ATQASQEY_______-p P16104;Y143-p ATQASQEY_______ 0.0268835787431391 0.814996042710337 1.061 0.0903333333333334 36.5244975738439 1.24304512807374 1.061 0.0903333333333334 0.000222612856603058 0.75109606582964 8.69056124398981 0.333745643421089 P16104 H2AFX P16104.Y143.p_H2AFX P16104_Y143y _1_1_143_143 P16104 P16104 Histone H2AX GG20160819_MSz_CCLE_T4D7_pY_Injection_01.6850.6850.2 10.35 4.88 10.35 3 1 1 0 782.3953 1483.8157 Y143y TMT10 135 (K) KATQASQEy (-) KAT(0.0)QAS(0.0)QEY(0.99) K:TMT10,y:Phosphorylated Y H2AFX 15144.3 1 1 334.1 10.35 HUMAN 1 36.5245 1.243 ATQCLVKSPEVKLMD-p O43379-4;S1128-p ATQCLVKSPEVKLMD 0.157981462649393 0.00298625627563545 -0.310333333333333 -1.02433333333333 16.0788271040929 37.9266864590026 -0.310333333333333 -1.02433333333333 0.0246670542860234 0.000161187498002379 -3.08334057292321 -9.2368039195379 O43379 WDR62 O43379.4.S1128.p_WDR62 O43379-4_S1128s _1_1_1128_1128 O43379-4 O43379-4 Isoform 4 of WD repeat-containing protein 62 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14008.14008.3 13.62 9.42 5.738 2 1 1 0 709.7333 2047.2189 S1128s TMT10 1121 (R) ATQCLVKsPEVK (L) AT(0.0)QCLVKS(0.99)PEVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WDR62 168676.3 2 7 671.1 248.72 HUMAN 1 -16.0788 -37.9267 ATQLRGGSFENNWNI-p P17858-2;S424-p ATQLRGGSFENNWNI 0.625123754739523 0.35636787420363 -0.0803333333333333 0.0903333333333333 3.78808036128449 5.94395799732177 -0.0803333333333333 0.0903333333333333 0.418015093985691 0.25445102241923 -0.876397866142429 1.27427323146267 P17858 PFKL P17858.2.S424.p_PFKL P17858-2_S424s _1_1_424_424 P17858-2 P17858-2 Isoform 2 of ATP-dependent 6-phosphofructokinase, liver type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22538.22538.3 10.68 10.68 10.683 2 1 1 0 656.3209 1886.9801 S424s TMT10 422 (R) GGsFENNWNIYK (L) GGS(0.99)FENNWNIY(0.0)K K:TMT10,s:Phosphorylated S PFKL 91228.4 3 1 4510.1 30.49 HUMAN 1 -3.7881 5.944 ATQSNEITIPVTFES-p P04792;T180-p ATQSNEITIPVTFES 0.336940767668124 0.167987468581628 -0.148 0.186 8.80251044987132 10.1915054443899 -0.148 0.186 0.131749493722727 0.0956862325721729 -1.77417714526557 2.01416985998957 P04792 HSPB1 P04792.T180.p_HSPB1 P04792_T180t _1_1_180_180 P04792 P04792|C9J3N8 Heat shock protein beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25676.25676.3 18.16 18.16 5.401 5 1 1 0 739.0448 2135.1546 T180t TMT10 172 (K) LATQSNEItIPVTFESR (A) LAT(0.0)QS(0.0)NEIT(0.99)IPVT(0.0)FES(0.0)R t:Phosphorylated T HSPB1 22839.1 3 14 357.1 346.69 HUMAN 1 -8.8025 10.1915 ATRATRESPGTSLPK-p J3KQC6;S149-p ATRATRESPGTSLPK 0.351973345829348 0.930938262261506 -0.186 -0.014 8.42080208975149 0.439016546474274 -0.186 -0.014 0.143853287397464 0.90385412699967 -1.70809171318176 -0.1265539608991 J3KQC6 NotFound J3KQC6.S149.p_NotFound J3KQC6_S149s _1_1_149_149 J3KQC6 Q9BYE2|J3KQC6|E9PRA0|Q9BYE2-2|Q9BYE2-4 Transmembrane protease serine 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8327.8327.2 9.54 4.31 1.345 4 1 1 0 891.4821 1701.99 S149s TMT10 145 (R) ATREsPGTSLPK (F) AT(0.0)RES(0.99)PGT(0.0)S(0.0)LPK K:TMT10,s:Phosphorylated S TMPRSS13 64250 3 10 1604.1 128.27 HUMAN 1 -8.4208 -0.439 ATRGAVQSGVDKTKS-p O60664;S160-p ATRGAVQSGVDKTKS 0.0849791838567285 0.00387979257248964 0.992 -0.608333333333333 22.9070879766993 35.6351941464456 0.992 -0.608333333333333 0.00512025042545535 0.000273199931020344 4.53249730584172 -8.33101511381345 O60664 PLIN3 O60664.S160.p_PLIN3 O60664_S160s _1_1_160_160 O60664 O60664|O60664-3|O60664-4 Perilipin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8564.8564.3 7.72 7.72 7.724 2 1 1 0 619.6867 1777.0787 S160s TMT10 156 (R) GAVQsGVDKTK (S) GAVQS(0.99)GVDKT(0.0)K K:TMT10,s:Phosphorylated S PLIN3 47245.3 1 4 1075.1 180.54 HUMAN 1 22.9071 -35.6352 ATRIPAKTPPAPKTP-p P10636;T492-p ATRIPAKTPPAPKTP 0.460353642571012 0.0865230698455862 0.156 0.293333333333333 6.21205441392002 14.0717501215001 0.156 0.293333333333333 0.239218387501115 0.0391584044625929 1.32225271414521 2.70446902197144 P10636 MAPT P10636.T492.p_MAPT P10636_T492t _1_1_492_492 P10636 P10636-9|A0A0G2JMX7|A0A0G2JS76|A0A0G2JPD5|A0A0G2JQJ7|P10636-8|P10636-7|P10636-5|P10636-6|P10636-4|P10636-2|I3L170|P10636-3 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13413.13413.4 7.45 7.45 99 1 1 1 0 447.5249 1707.1136 T492t TMT10 488 (R) IPAKtPPAPK (T) IPAKT(1.0)PPAPK K:TMT10,t:Phosphorylated T MAPT 79154.4 6 8 119.1 551.6 HUMAN 1 6.2121 14.0718 ATRKRLDSELKELRQ-p Q08378;S878-p ATRKRLDSELKELRQ 0.037433821034406 0.00117984223282173 -1.50966666666667 -1.98766666666667 32.5364272895929 48.4810364158066 -1.50966666666667 -1.98766666666667 0.000557644304690303 1.41871891315718e-05 -7.24252841535816 -14.6926687383595 Q08378 GOLGA3 Q08378.S878.p_GOLGA3 Q08378_S878s _1_1_878_878 Q08378 Q08378|Q08378-2 Golgin subfamily A member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11268.11268.3 9.29 3.19 99 1 1 1 0 466.9302 1318.8095 S878s TMT10 875 (K) RLDsELK (E) RLDS(1.0)ELK K:TMT10,s:Phosphorylated S GOLGA3 167865.2 1 11 515.1 286.2 HUMAN 1 -32.5364 -48.481 ATRKRRWSAPESRKL-p P54253;S775-p ATRKRRWSAPESRKL 0.152223300387837 0.587542982414766 0.583333333333333 -0.118333333333333 16.4564056546745 3.12145175474633 0.583333333333333 -0.118333333333333 0.0226130651791186 0.487365546859675 3.15632286682564 -0.74486738732059 P54253 ATXN1 P54253.S775.p_ATXN1 P54253_S775s _1_1_775_775 P54253 P54253 Ataxin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4326.4326.2 11.85 6.35 3.885 2 1 1 0 534.7355 988.4959 S775s Hydrogen 773 (R) RWsAPESR (K) RWS(0.99)APES(0.0)R s:Phosphorylated S ATXN1 87263.4 8 6 1702.1 120.26 HUMAN 1 16.4564 -3.1215 ATRSEALSSVLDQEE-p Q12888-2;S644-p ATRSEALSSVLDQEE 0.560589251933937 0.0189173566597529 -0.126666666666667 0.381333333333333 4.63294244752025 23.7067798038522 -0.126666666666667 0.381333333333333 0.344116704582617 0.00425914101832215 -1.03634192008473 4.71802984665846 Q12888 TP53BP1 Q12888.2.S644.p_TP53BP1 Q12888-2_S644sS645s_2_2_644_645 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31136.31541.3 11.79 11.79 3.621 3 2 2 0 833.058 2337.226 S644s S645s TMT10 640 (R) SEALssVLDQEEAMEIK (E) S(0.0)EALS(0.99)S(0.99)VLDQEEAMEIK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 3 93 3.1 2297.07 HUMAN 1 -4.6329 23.7068 ATSDTLESPPKIIPK-p O94782;S313-p ATSDTLESPPKIIPK 0.132277812902063 0.000993050805672115 -0.316666666666667 -1.66966666666667 18.1351356195743 52.6969935380837 -0.316666666666667 -1.66966666666667 0.0153633681653084 5.37403692558736e-06 -3.48966590819744 -17.6306580432606 O94782 USP1 O94782.S313.p_USP1 O94782_S313s _1_1_313_313 O94782 O94782 Ubiquitin carboxyl-terminal hydrolase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19820.20023.3 19.65 19.65 3.19 4 1 1 0 788.7851 2284.3731 S313s TMT10 306 (K) ATSDTLEsPPKIIPK (Y) AT(0.0)S(0.0)DT(0.0)LES(0.99)PPKIIPK K:TMT10,s:Phosphorylated S USP1 89232.6 4 3 1052.1 182.92 HUMAN 1 -18.1351 -52.697 ATSEIFHSQSFLATG-p B5ME97;S432-p ATSEIFHSQSFLATG 0.526980686655073 0.00244641125596515 0.110333333333333 0.874 5.14950579191901 40.0588245409839 0.110333333333333 0.874 0.305526876962597 9.8654646761423e-05 1.13138656303324 10.1578528978523 B5ME97 SEPT10 B5ME97.S432.p_SEPT10 B5ME97_S432s _1_1_432_432 B5ME97 B5ME97|Q9P0V9-2|E7EX04|E7EW69|Q9P0V9-3 Septin 10, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19169.19169.4 12.07 12.07 3.15 6 1 1 0 683.8601 2652.451 S432s TMT10 425 (K) ATSEIFHsQSFLATGSNLRK (D) AT(0.0)S(0.0)EIFHS(0.99)QS(0.0)FLAT(0.0)GS(0.0)NLRK K:TMT10,s:Phosphorylated S SEPT10 63742.6 1 2 3428.1 51.33 HUMAN 1 5.1495 40.0588 ATSGMRLSDMSPRSN-p Q9ULM0;S436-p ATSGMRLSDMSPRSN 0.658417455592086 0.186655612096525 -0.0966666666666667 -0.237 3.4060243441643 9.58876825304143 -0.0966666666666667 -0.237 0.456454576320481 0.109931758391528 -0.801739946436275 -1.90960856309717 Q9ULM0 PLEKHH1 Q9ULM0.S436.p_PLEKHH1 Q9ULM0_S436s _1_1_436_436 Q9ULM0 Q9ULM0 Pleckstrin homology domain-containing family H member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22835.22835.3 12.99 10.03 1.253 5 1 1 0 722.022 2084.083 S436s TMT10 425 (R) IYAVATSGMRLsDMSPR (S) IY(0.0)AVAT(0.0)S(0.0)GMRLS(0.99)DMS(0.0)PR s:Phosphorylated S PLEKHH1 152827.1 2 10 981.1 192.43 HUMAN 1 -3.406 -9.5888 ATSHRSLSPQLLQQM-p Q9UPX8-3;S446-p ATSHRSLSPQLLQQM 0.930978723493408 0.10016820010431 -0.0146666666666667 0.175 0.61551165950283 13.2044368931361 -0.0146666666666666 0.175 0.867858325447977 0.0478141358008892 -0.174442948498473 2.54654790358005 Q9UPX8 SHANK2 Q9UPX8.3.S446.p_SHANK2 Q9UPX8-3_S446s _1_1_446_446 Q9UPX8-3 Q9UPX8|Q9UPX8-3 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21510.21510.3 19.12 15.14 1.95 3 1 1 0 926.5137 2697.5576 S446s TMT10 444 (R) SLsPQLLQQMPSKPEGAAK (T) S(0.0)LS(0.99)PQLLQQMPS(0.0)KPEGAAK K:TMT10,s:Phosphorylated S SHANK2 202341.2 3 5 86.1 628.23 HUMAN 1 -0.6155 13.2044 ATSLSDLTIESPPNE-p P25054;T1661-p ATSLSDLTIESPPNE 0.871481287271926 0.763553479953782 0.0363333333333333 -0.0396666666666667 1.16949769240536 1.61877024640787 0.0363333333333333 -0.0396666666666667 0.763924134390412 0.688847323585588 0.31587091587413 -0.422571204523265 P25054 APC P25054.T1661.p_APC P25054_T1661tS1664s_2_2_1661_1664 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35170.35170.4 10.16 10.16 1.759 9 2 2 0 1047.2419 4024.0059 N1650n T1661t S1664s N1667n TMT10 1641 (R) VYCVEGTPInFSTATSLSDLtIEsPPnELAAGEGVR (G) VY(0.0)CVEGT(0.0)PIN(1.0)FS(0.0)T(0.0)AT(0.0)S(0.0)LS(0.0)DLT(0.99)IES(0.99)PPN(1.0)ELAAGEGVR C:Carbamidomethylation,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S APC 313808.5 2 62 33.1 890.71 HUMAN 1 1.1695 -1.6188 ATSPISPTENNTTPP-p Q13153-2;T225-p ATSPISPTENNTTPP 0.426313016558813 0.8265851961114 0.121666666666667 0.0223333333333334 6.82152863219854 1.15708356561929 0.121666666666667 0.0223333333333334 0.207896480308767 0.766110903599692 1.42973514069925 0.312798450482236 Q13153 PAK1 Q13153.2.T225.p_PAK1 Q13153-2_T225t _1_1_225_225 Q13153-2 Q13153-2|B3KNX7|E9PM17 Isoform 2 of Serine/threonine-protein kinase PAK 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18121.18121.3 20.45 20.45 1.122 7 1 1 0 869.4273 2526.2885 T225t TMT10 216 (R) DVATSPISPtENNTTPPDALTR (N) DVAT(0.0)S(0.0)PIS(0.0)PT(0.99)ENNT(0.0)T(0.0)PPDALT(0.0)R t:Phosphorylated T PAK1 62087.3 11 9 272.2 393.22 HUMAN 1 6.8215 1.1571 ATSSHPNSTSLKAKV-p Q14258;S433-p ATSSHPNSTSLKAKV 0.198733336721893 0.178800125828473 -0.239 -0.136333333333333 13.6607732604122 9.832647441797 -0.239 -0.136333333333333 0.0430449962143017 0.103928642783565 -2.63084424589138 -1.95187525942455 Q14258 TRIM25 Q14258.S433.p_TRIM25 Q14258_S433s _1_1_433_433 Q14258 Q14258 E3 ubiquitin/ISG15 ligase TRIM25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6039.6039.3 9 9 1.333 6 1 1 0 589.9714 1687.9379 S433s TMT10 426 (K) ATSSHPNsTSLK (A) AT(0.0)S(0.0)S(0.0)HPNS(0.99)T(0.0)S(0.0)LK K:TMT10,s:Phosphorylated S TRIM25 72626.7 3 6 2037.1 101.35 HUMAN 1 -13.6608 -9.8326 ATSSKTPS_______-p Q9UNZ5;S99-p ATSSKTPS_______ 0.271100102299359 0.0363715867017224 0.207333333333333 0.354333333333333 10.7435106171825 19.3693975779147 0.207333333333333 0.354333333333333 0.0842653324007488 0.0115627262089445 2.11123280749546 3.74154312237692 Q9UNZ5 C19orf53 Q9UNZ5.S99.p_C19orf53 Q9UNZ5_S99s _1_1_99_99 Q9UNZ5 Q9UNZ5 Leydig cell tumor 10 kDa protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5827.5827.2 10.45 10.45 10.451 5 1 1 0 793.9132 1506.8528 S99s TMT10 88 (K) GAAAATSSKTPs (-) GAAAAT(0.0)S(0.0)S(0.0)KT(0.0)PS(0.99) K:TMT10,s:Phosphorylated S C19orf53 10576.4 1 1 5782.1 16.32 HUMAN 1 10.7435 19.3694 ATSSQRSSPYGTLKP-p Q5JSZ5;S1691-p ATSSQRSSPYGTLKP 0.0742703858650733 0.0302638698143828 -0.445 -0.380666666666667 24.2215244788168 20.5508560935157 -0.445 -0.380666666666667 0.0037830976551679 0.00880875215288997 -4.84927658256517 -3.99431030773415 Q5JSZ5 PRRC2B Q5JSZ5.S1691.p_PRRC2B Q5JSZ5_S1691s _1_1_1691_1691 Q5JSZ5 Q5JSZ5|Q5JSZ5-5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20658.20658.3 7.38 7.38 1.136 5 1 1 0 981.5111 2862.5526 S1691s TMT10 1690 (R) SsPYGTLKPEEMSGPGLAEPK (A) S(0.0)S(0.99)PY(0.0)GT(0.0)LKPEEMS(0.0)GPGLAEPK K:TMT10,s:Phosphorylated S PRRC2B 244103.4 8 80 36.2 882.05 HUMAN 1 -24.2215 -20.5509 ATSSRPCTPPQTCWF-p Q75QN2;T18-p ATSSRPCTPPQTCWF 0.409187193084214 0.0192035253059585 -0.111 0.402666666666667 7.15290095680409 23.5958681186484 -0.111 0.402666666666667 0.192623781431496 0.00436931331391688 -1.48775207224177 4.69128860591344 Q75QN2 INTS8 Q75QN2.T18.p_INTS8 Q75QN2_T18t _1_1_18_18 Q75QN2 Q75QN2|Q75QN2-2|J3KNV5|E5RG48 Integrator complex subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37378.37378.4 26.05 21.4 1.834 7 1 1 0 1095.2612 4298.0583 T18t Acetyl 2 (M) SAEAADREAATSSRPCtPPQTCWFEFLLEESLLEK (H) S(0.0)AEAADREAAT(0.0)S(0.0)S(0.0)RPCT(0.99)PPQT(0.0)CWFEFLLEES(0.0)LLEK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T INTS8 114569.4 3 1 4840.1 26.05 HUMAN 1 -7.1529 23.5959 ATSSSNPSSPAPDWY-p P46100;S1995-p ATSSSNPSSPAPDWY 0.916963697628859 0.0265968002706058 -0.0166666666666667 0.335 0.734303839195895 21.3814267318116 -0.0166666666666667 0.335 0.844441592471451 0.00727540755664787 -0.205835821643937 4.17763415641905 P46100 ATRX P46100.S1995.p_ATRX P46100_S1995sS1996s_2_2_1995_1996 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19365.19365.2 11.05 11.05 1.133 7 2 2 0 1157.0175 2153.0915 S1995s S1996s TMT10 1988 (K) ATSSSNPssPAPDWYK (D) AT(0.0)S(0.0)S(0.0)S(0.0)NPS(0.99)S(0.99)PAPDWY(0.0)K K:TMT10,s:Phosphorylated S ATRX 285034.2 8 59 18.1 1035.36 HUMAN 1 -0.7343 21.3814 ATSSSPGSPLHSLET-p P20020;S1249-p ATSSSPGSPLHSLET 0.931074993503674 0.956521109861899 0.0153333333333333 0.00566666666666667 0.614051299695014 0.276815557968757 0.0153333333333333 0.00566666666666667 0.868150200795178 0.938249721563318 0.174053005011573 0.0811292895115339 P20020 ATP2B1 P20020.S1249.p_ATP2B1 P20020_S1249s _1_1_1249_1249 P20020 Q01814-5|Q01814-8|Q01814-6|P20020|P20020-4|P20020-3 Plasma membrane calcium-transporting ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24407.24407.2 9.96 9.96 2.162 9 1 1 0 1033.9976 1987.0181 S1249s TMT10 1241 (K) SATSSSPGsPLHSLETSL (-) S(0.0)AT(0.0)S(0.0)S(0.0)S(0.0)PGS(0.99)PLHS(0.0)LET(0.0)S(0.0)L s:Phosphorylated S ATP2B1 139722.6 2 9 921.1 200.23 HUMAN 1 0.6141 0.2768 ATSSSSGSLSATGRL-p Q03252;S424-p ATSSSSGSLSATGRL 0.680858795624495 0.484261297116107 -0.0593333333333333 0.067 3.1326619959758 4.20486543761999 -0.0593333333333334 0.067 0.486109155098414 0.379763705438214 -0.74723101631416 0.955924737059852 Q03252 LMNB2 Q03252.S424.p_LMNB2 Q03252_S424s _1_1_424_424 Q03252 Q03252 Lamin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5291.5291.3 17.61 17.61 1.462 8 1 1 0 526.5845 1497.7706 S424s TMT10 417 (R) ATSSSSGsLSATGR (L) AT(0.0)S(0.0)S(0.0)S(0.0)S(0.0)GS(0.99)LS(0.0)AT(0.0)GR s:Phosphorylated S LMNB2 70061.3 4 30 440.2 312.01 HUMAN 1 -3.1327 4.2049 ATTDLGRSLGPVELL-p Q16512-2;S75-p ATTDLGRSLGPVELL 0.170677699585152 0.0339467350147796 -0.415333333333333 -0.379 15.322264848423 19.8052993770128 -0.415333333333333 -0.379 0.029361180652382 0.0104585159313502 -2.93911358867102 -3.83374665740117 Q16512 PKN1 Q16512.2.S75.p_PKN1 Q16512-2_S75s _1_1_75_75 Q16512-2 Q16512-2|Q16512-3 Isoform 2 of Serine/threonine-protein kinase N1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.34524.34524.2 13.15 13.15 99 1 1 1 0 703.4047 1325.8354 S75s TMT10 75 (R) sLGPVELLLR (G) S(1.0)LGPVELLLR s:Phosphorylated S PKN1 105469.7 4 1 721.1 237.15 HUMAN 1 -15.3223 -19.8053 ATVARMNSQDSNTSV-p Q9UJA3-4;S670-p ATVARMNSQDSNTSV 0.18947715453248 0.00980740305853719 0.203333333333333 -0.455666666666667 14.1373598337768 28.2676984043527 0.203333333333333 -0.455666666666667 0.0385712769198371 0.00149015059164839 2.71817300403093 -5.91323049529548 Q9UJA3 MCM8 Q9UJA3.4.S670.p_MCM8 Q9UJA3-4_S670s _1_1_670_670 Q9UJA3-4 Q9UJA3-4|Q9UJA3-3|Q9UJA3-2 Isoform 4 of DNA helicase MCM8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23460.23460.4 16.18 15.72 1.115 6 1 1 0 747.6262 2907.5134 S670s TMT10 668 (R) MNsQDSNTSVLEVVSEKPLSER (L) MNS(0.99)QDS(0.0)NT(0.0)S(0.0)VLEVVS(0.0)EKPLS(0.0)ER K:TMT10,s:Phosphorylated S MCM8 98842.7 2 1 5254.1 21.3 HUMAN 1 14.1374 -28.2677 ATVKVASSPVMVSNP-p P51610;S598-p ATVKVASSPVMVSNP 0.505955843363506 0.0954638996324452 0.115333333333333 -0.184 5.46247268414311 13.4928100339723 0.115333333333333 -0.184 0.284284205579576 0.0447423712039867 1.18817414470202 -2.59876847919154 P51610 HCFC1 P51610.S598.p_HCFC1 P51610_S598s _1_1_598_598 P51610 P51610|P51610-2|A6NEM2|P51610-4 Host cell factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13416.13416.2 10.42 10.42 1.108 4 1 1 0 862.9355 1644.8941 S598s TMT10 595 (K) VASsPVMVSNPATR (M) VAS(0.0)S(0.99)PVMVS(0.0)NPAT(0.0)R s:Phosphorylated S HCFC1 210725.7 7 6 625.1 258.74 HUMAN 1 5.4625 -13.4928 ATVLLSMSKGGKRKD-p Q53EL6;S305-p ATVLLSMSKGGKRKD 0.125098644620753 0.0140130410445387 0.29 0.451333333333333 18.7809363157137 25.7133927161192 0.29 0.451333333333333 0.0132405604500724 0.00268324746904941 3.62207250959203 5.21999723679611 Q53EL6 PDCD4 Q53EL6.S305.p_PDCD4 Q53EL6_S305s _1_1_305_305 Q53EL6 Q53EL6|Q53EL6-2 Programmed cell death protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23070.23070.3 14.48 14.48 2.746 3 1 1 0 496.6161 1407.8645 S305s TMT10 298 (K) ATVLLSMsK (G) AT(0.0)VLLS(0.0)MS(0.99)K K:TMT10,s:Phosphorylated S PDCD4 52133.7 3 9 476.1 301.17 HUMAN 1 18.7809 25.7134 ATVQKQKSGELNGDQ-p F5H7W8;S254-p ATVQKQKSGELNGDQ 0.250994933336553 0.504559291271328 0.216333333333333 0.0686666666666667 11.457515080909 3.98110928640356 0.216333333333333 0.0686666666666667 0.071490525910815 0.399842607865023 2.2364654999143 0.91336274620727 F5H7W8 C12orf43 F5H7W8.S254.p_C12orf43 F5H7W8_S254s _1_1_254_254 F5H7W8 F5H7W8|Q96C57|G5EA44|E7ENF1 Chromosome 12 open reading frame 43, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14212.14212.3 14.01 14.01 4.284 3 1 1 0 810.1076 2348.3389 S254s TMT10 252 (K) QKsGELNGDQVSLGTK (K) QKS(0.99)GELNGDQVS(0.0)LGT(0.0)K K:TMT10,s:Phosphorylated S C12orf43 31921.4 1 7 1296.1 156.8 HUMAN 1 11.4575 3.9811 ATVSAATSTESISTR-p Q05209;S636-p ATVSAATSTESISTR 0.303027901035428 0.839140711888613 0.143 -0.023 9.71769807282838 1.07118452147469 0.143 -0.023 0.106716160789703 0.781414647684864 1.93270400780218 -0.291611214728163 Q05209 PTPN12 Q05209.S636.p_PTPN12 Q05209_S636s _1_1_636_636 Q05209 Q05209|Q05209-3|Q05209-2 Tyrosine-protein phosphatase non-receptor type 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14941.14941.4 9.89 9.89 1.231 12 1 1 0 706.3691 2742.4885 S636s TMT10 622 (K) TNISTASATVSAATsTESISTRK (V) T(0.0)NIS(0.0)T(0.0)AS(0.0)AT(0.0)VS(0.0)AAT(0.0)S(0.99)T(0.0)ES(0.0)IS(0.0)T(0.0)RK K:TMT10,s:Phosphorylated S PTPN12 88960.6 3 12 644.1 254.82 HUMAN 1 9.7177 -1.0712 ATVTRSQSLNIRTTQ-p O00443;S338-p ATVTRSQSLNIRTTQ 0.394490226845296 0.143237938795515 0.139 -0.150666666666667 7.4542507116621 11.1183812371532 0.139 -0.150666666666667 0.179711110903598 0.0772968643040259 1.54031619394355 -2.1758686390479 O00443 PIK3C2A O00443.S338.p_PIK3C2A O00443_S338s _1_1_338_338 O00443 O00443|O00443-2|A0A0C4DGF9 Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9142.9142.2 11.36 2.17 2.118 2 1 1 0 563.7953 1046.6156 S338s TMT10 336 (R) SQsLNIR (T) S(0.0)QS(0.99)LNIR s:Phosphorylated S PIK3C2A 192273.6 2 3 2829.1 68.79 HUMAN 1 7.4543 -11.1184 ATVTTCHSKTAHLDE-p F5H2F4;S253-p ATVTTCHSKTAHLDE 0.627993569436905 0.677637638325584 0.0646666666666667 0.0396666666666667 3.75299887430796 2.3098636335644 0.0646666666666667 0.0396666666666667 0.421405415619628 0.587507799710221 0.869610516925443 0.576309435030535 F5H2F4 NotFound F5H2F4.S253.p_NotFound F5H2F4_S253s _1_1_253_253 F5H2F4 F5H2F4|P11586 C-1-tetrahydrofolate synthase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27351.27351.5 24.08 19.01 2.084 4 1 1 0 624.1223 3036.6163 S253s TMT10 232 (K) IVGAPMHDLLLWNNATVTTCHsK (T) IVGAPMHDLLLWNNAT(0.0)VT(0.0)T(0.0)CHS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTHFD1 111409.8 3 2 1887.1 109.02 HUMAN 1 3.753 2.3099 ATVVAVGSGSKGKDF-p S4R3N1;S51-p ATVVAVGSGSKGKDF 0.327670104531491 0.0446267912162327 0.143666666666667 0.243666666666667 9.06407163142211 18.0756310243333 0.143666666666667 0.243666666666667 0.12404887695687 0.0155753171102215 1.81945470293227 3.47472798616499 S4R3N1 HSPE1-MOB4 S4R3N1.S51.p_HSPE1-MOB4 S4R3N1_S51s _1_1_51_51 S4R3N1 S4R3N1|P61604|B8ZZL8 HSPE1-MOB4 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21137.21137.3 20.63 20.63 2.41 3 1 1 0 618.6886 1774.0839 S51s TMT10 41 (K) VLQATVVAVGsGSK (G) VLQAT(0.0)VVAVGS(0.99)GS(0.0)K K:TMT10,s:Phosphorylated S HSPE1-MOB4 30249.8 5 4 2805.1 70.03 HUMAN 1 9.0641 18.0756 ATYAPVISAEKAYHE-p P68363;S277-p ATYAPVISAEKAYHE 0.391150856817222 0.0473301085758772 -0.115333333333333 0.261 7.5308101506751 17.7261737474623 -0.115333333333333 0.261 0.176570840749972 0.016880395792387 -1.55364545539206 3.4043248942888 P68363 TUBA1B P68363.S277.p_TUBA1B P68363_S277s _1_1_277_277 P68363 F5H5D3|Q71U36|P68363|Q13748|Q6PEY2|Q9BQE3 Tubulin alpha-1B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27920.27920.3 18.86 18.86 2.172 3 1 1 0 765.7576 2215.2891 S277s TMT10 265 (R) IHFPLATYAPVIsAEK (A) IHFPLAT(0.0)Y(0.0)APVIS(0.99)AEK K:TMT10,s:Phosphorylated S TUBA1B 50835.4 1 10 868.1 210.03 HUMAN 1 -7.5308 17.7262 ATYERSPSPAHLPDD-p Q92615;S601-p ATYERSPSPAHLPDD 0.177205134669313 0.256843187535103 0.283333333333333 -0.143 14.8923439154144 7.7758128664559 0.283333333333333 -0.143 0.0324164616388454 0.166885541927902 2.85828446539575 -1.59575350534977 Q92615 LARP4B Q92615.S601.p_LARP4B Q92615_S601s _1_1_601_601 Q92615 Q92615 La-related protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12806.12806.5 16.48 16.48 1.744 2 1 1 0 491.8696 2375.3538 S601s TMT10 599 (R) SPsPAHLPDDPKVAEK (Q) S(0.0)PS(0.99)PAHLPDDPKVAEK K:TMT10,s:Phosphorylated S LARP4B 80949.9 23 8 332.1 357.69 HUMAN 1 14.8923 -7.7758 ATYPRQLSPYFCPPS-p Q8TE76-3;S889-p ATYPRQLSPYFCPPS 0.701680762220492 0.682565643483629 0.0653333333333333 -0.0393333333333333 2.89187032194658 2.26954565831212 0.0653333333333333 -0.0393333333333333 0.513822322468218 0.592987357324086 0.698363048860511 -0.567631383674234 Q8TE76 MORC4 Q8TE76.3.S889.p_MORC4 Q8TE76-3_S889s _1_1_889_889 Q8TE76-3 Q8TE76-3|Q8TE76-2 Isoform 3 of MORC family CW-type zinc finger protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29684.29684.2 11.71 11.71 3.705 4 1 1 0 916.9269 1752.8828 S889s TMT10 887 (R) QLsPYFCPPSLGAS (-) QLS(0.99)PY(0.0)FCPPS(0.0)LGAS(0.0) C:Carbamidomethylation,s:Phosphorylated S MORC4 102730.9 1 2 3739.1 44.1 HUMAN 1 2.8919 -2.2695 ATYRAQPSVSLGAAY-p Q96PK6;S242-p ATYRAQPSVSLGAAY 0.443446532858587 0.821393935769523 0.102333333333333 0.024 6.50947982085523 1.19557437686871 0.102333333333333 0.024 0.223383976647223 0.759350987938915 1.37484638976272 0.322208833260956 Q96PK6 RBM14 Q96PK6.S242.p_RBM14 Q96PK6_S242s _1_1_242_242 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14089.14089.2 10.17 10.17 2.157 3 1 1 0 764.8897 1448.8059 S242s TMT10 239 (R) AQPsVSLGAAYR (A) AQPS(0.99)VS(0.0)LGAAY(0.0)R s:Phosphorylated S RBM14 69661.6 2 7 151.1 510.8 HUMAN 1 6.5095 1.1956 AVADEGESESEDDDL-p Q9Y2K6;S132-p AVADEGESESEDDDL 0.415666897037693 0.615969452794244 -0.110666666666667 -0.0526666666666666 7.034696899156 2.86021748717065 -0.110666666666667 -0.0526666666666667 0.19793851607725 0.517580911744026 -1.46708536467939 -0.691780492617066 Q9Y2K6 USP20 Q9Y2K6.S132.p_USP20 Q9Y2K6_S132s _1_1_132_132 Q9Y2K6 Q9Y2K6 Ubiquitin carboxyl-terminal hydrolase 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19587.19587.3 21.94 21.94 2.268 2 1 1 0 960.802 2800.4253 S132s TMT10 121 (K) AVPIAVADEGEsESEDDDLKPR (G) AVPIAVADEGES(0.99)ES(0.0)EDDDLKPR K:TMT10,s:Phosphorylated S USP20 103827 4 3 1704.1 120.18 HUMAN 1 -7.0347 -2.8602 AVADGSESETEDSVL-p O60447-2;S789-p AVADGSESETEDSVL 0.640615783875993 0.171092570935137 0.0676666666666667 0.143333333333333 3.61241358102754 10.0806627094566 0.0676666666666667 0.143333333333333 0.435269906262922 0.0981598145121231 0.842277009457084 1.994913815874 O60447 EVI5 O60447.2.S789.p_EVI5 O60447-2_S787sS789s_2_2_787_789 O60447-2 O60447-2 Isoform 2 of Ecotropic viral integration site 5 protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24624.24624.3 22.92 22.92 1.132 8 2 2 0 1020.0938 2898.336 S787s S789s TMT10 774 (K) SGSMSLDPAVADGsEsETEDSVLETR (E) S(0.0)GS(0.0)MS(0.0)LDPAVADGS(0.99)ES(0.99)ET(0.0)EDS(0.0)VLET(0.0)R s:Phosphorylated S EVI5 94702 2 3 2708.1 73.26 HUMAN 1 3.6124 10.0807 AVAESVASPQKTMSV-p Q12888-2;S1033-p AVAESVASPQKTMSV 0.9425509765566 0.271509586312301 0.011 -0.126666666666667 0.505740170722197 7.45722449371398 0.011 -0.126666666666667 0.89007372927661 0.179588097885803 0.14484726109547 -1.54038030470679 Q12888 TP53BP1 Q12888.2.S1033.p_TP53BP1 Q12888-2_S1033s_1_1_1033_1033 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22285.22285.5 27.13 21.71 0 9 1 1 0 1063.558 5232.8046 N1022n S1033s TMT10 996 (K) LVSPETEASEESLQFNLEKPATGERKnGSTAVAESVAsPQK (T) LVS(0.0)PET(0.0)EAS(0.0)EES(0.0)LQFN(0.50)LEKPAT(0.0)GERKN(0.50)GS(0.0)T(0.0)AVAES(0.0)VAS(0.99)PQK K:TMT10,n:Deamidated,s:Phosphorylated S TP53BP1 216167.2 32 44 3.1 2297.07 HUMAN 1 0.5057 -7.4572 AVALGTNSLKQQEPG-p Q9HCH0;S731-p AVALGTNSLKQQEPG 0.659687643651056 0.316476458953244 0.0656666666666667 0.111666666666667 3.3860508579186 6.60311759403851 0.0656666666666667 0.111666666666667 0.458558675399088 0.218619169723145 0.797789743383386 1.39098336855189 Q9HCH0 NCKAP5L Q9HCH0.S731.p_NCKAP5L Q9HCH0_S731s _1_1_731_731 Q9HCH0 Q9HCH0|Q9HCH0-3|Q9HCH0-2 Nck-associated protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19333.19333.4 19.49 17 2.1 2 1 1 0 727.1318 2825.5344 S731s TMT10 723 (R) GAVALGTNsLKQQEPGLMGDPGAR (V) GAVALGT(0.0)NS(0.99)LKQQEPGLMGDPGAR K:TMT10,s:Phosphorylated S NCKAP5L 140323.1 5 12 609.1 261.98 HUMAN 1 3.3861 6.6031 AVASRDLSENNDQRQ-p Q8NBJ4;S191-p AVASRDLSENNDQRQ 0.417601052440412 0.248890414632129 -0.140333333333333 0.136666666666667 6.99935146992738 7.95658516809676 -0.140333333333333 0.136666666666667 0.199556028887554 0.160081624626058 -1.4608996901759 1.6271155854491 Q8NBJ4 GOLM1 Q8NBJ4.S191.p_GOLM1 Q8NBJ4_S191s _1_1_191_191 Q8NBJ4 Q8NBJ4|Q8NBJ4-2 Golgi membrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5370.5370.3 12.44 6.09 2.593 2 1 1 0 847.7524 2461.2795 S191s TMT10 180 (K) KGNEAVASRDLsENNDQR (Q) KGNEAVAS(0.0)RDLS(0.99)ENNDQR K:TMT10,s:Phosphorylated S GOLM1 45503.6 1 2 1754.1 117.54 HUMAN 1 -6.9994 7.9566 AVAVAPLSASKTKTK-p P78356;S17-p AVAVAPLSASKTKTK 0.674817762895961 0.00635134156850952 -0.0696666666666667 -0.476666666666667 3.20067154532009 31.6356554001703 -0.0696666666666667 -0.476666666666667 0.478556087940207 0.000686174319024958 -0.760884395356634 -6.93384284740663 P78356 PIP4K2B P78356.S17.p_PIP4K2B P78356_S17s _1_1_17_17 P78356 P78356|P78356-2 Phosphatidylinositol 5-phosphate 4-kinase type-2 beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19031.19031.3 17.2 15.77 2.85 8 1 1 0 735.0231 2123.0852 S17s Acetyl 2 (M) SSNCTSTTAVAVAPLsASK (T) S(0.0)S(0.0)NCT(0.0)S(0.0)T(0.0)T(0.0)AVAVAPLS(0.99)AS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PIP4K2B 47776.5 2 1 3550.1 48.45 HUMAN 1 -3.2007 -31.6357 AVDEGSISPRTLSAI-p R4GMW8;S838-p AVDEGSISPRTLSAI 0.247048592039774 0.296648477995653 0.227333333333333 0.123666666666667 11.5986342488532 6.96679142499744 0.227333333333333 0.123666666666667 0.0692048569245904 0.20105776822328 2.2613390386947 1.45479894996743 R4GMW8 NotFound R4GMW8.S838.p_NotFound R4GMW8_S836sS838s_2_2_836_838 R4GMW8 R4GMW8|A0A1W2PS85|P28715 BIVM-ERCC5 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11874.11874.3 12.13 12.13 99 2 2 2 0 591.6001 1612.8492 S836s S838s TMT10 827 (R) NAPAAVDEGsIsPR (T) NAPAAVDEGS(1.0)IS(1.0)PR s:Phosphorylated S BIVM-ERCC5 185876.1 1 16 561.1 271.77 HUMAN 1 11.5986 6.9668 AVDLPAVSEKDIQDL-p P14618;S222-p AVDLPAVSEKDIQDL 0.761075965165946 0.634677503215453 -0.078 0.0573333333333334 2.27627522023904 2.68616296941292 -0.078 0.0573333333333334 0.592069211882917 0.538745558828316 -0.56915168151962 0.655827671726382 P14618 PKM P14618.S222.p_PKM P14618_S222s _1_1_222_222 P14618 P14618|P14618-2|P14618-3|B4DNK4|H3BR70|H3BQ34 Pyruvate kinase PKM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28384.28384.4 20.44 16.78 99 1 1 1 0 779.9362 3036.7548 S222s TMT10 208 (K) GVNLPGAAVDLPAVsEKDIQDLK (F) GVNLPGAAVDLPAVS(1.0)EKDIQDLK K:TMT10,s:Phosphorylated S PKM 58506.4 1 11 502.1 291.2 HUMAN 1 -2.2763 2.6862 AVDSADRSPRPTSAP-p P11171;S555-p AVDSADRSPRPTSAP 0.953559929465783 0.371778658302515 0.011 -0.0896666666666666 0.406047091837262 5.70170038626814 0.011 -0.0896666666666666 0.910741844289992 0.269048119786366 0.117447353801743 -1.23095688048499 P11171 EPB41 P11171.S555.p_EPB41 P11171_S555s _1_1_555_555 P11171 P11171|P11171-2|P11171-5|P11171-7|P11171-3|Q4VB86|P11171-4|P11171-6 Protein 4.1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18961.18961.4 21.65 21.65 1.215 7 1 1 0 1069.5481 4195.1995 S555s TMT10 542 (R) SLDGAAAVDSADRsPRPTSAPAITQGQVAEGGVLDASAK (K) S(0.0)LDGAAAVDS(0.0)ADRS(0.99)PRPT(0.0)S(0.0)APAIT(0.0)QGQVAEGGVLDAS(0.0)AK K:TMT10,s:Phosphorylated S EPB41 97585.6 14 25 469.3 302.69 HUMAN 1 0.406 -5.7017 AVEALADSLGKKEAD-p P20810-6;S523-p AVEALADSLGKKEAD 0.176527526104725 0.00436682404541902 -0.517333333333333 0.567 14.9451182938848 34.6826415998008 -0.517333333333334 0.567 0.0320249286338455 0.000340201199093779 -2.86816438615187 7.97811057390692 P20810 CAST P20810.6.S523.p_CAST P20810-6_S523s _1_1_523_523 P20810-6 P20810-6|P20810-7|P20810-10|P20810-5|A0A0C4DGB5|P20810-9|P20810-2 Isoform 6 of Calpastatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23800.23800.4 21.82 17.39 16.122 2 1 1 0 639.0999 2473.4117 S523s TMT10 510 (K) GTVPDDAVEALADsLGKK (E) GT(0.0)VPDDAVEALADS(0.99)LGKK K:TMT10,s:Phosphorylated S CAST 85340.8 1 14 314.1 369.19 HUMAN 1 -14.9451 34.6826 AVEAPPQT_______-p Q9H147;T329-p AVEAPPQT_______ 0.339536784547095 0.539377456292216 0.16 -0.0603333333333333 8.72774183224284 3.60616044863585 0.16 -0.0603333333333333 0.134037344998264 0.435897075356383 1.76123464160092 -0.840923719316353 Q9H147 DNTTIP1 Q9H147.T329.p_DNTTIP1 Q9H147_T329t _1_1_329_329 Q9H147 Q9H147 Deoxynucleotidyltransferase terminal-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8762.8762.2 10.04 10.04 99 1 1 1 0 561.2753 1041.5778 T329t TMT10 322 (R) AVEAPPQt (-) AVEAPPQT(1.0) t:Phosphorylated T DNTTIP1 37298 1 2 4021.1 38.97 HUMAN 1 8.7277 -3.6062 AVEEDAESEDEEEED-p P06748;S125-p AVEEDAESEDEEEED 0.158312848211182 0.0289616320631613 0.230666666666667 0.300666666666667 16.0408285940889 20.8271518480042 0.230666666666667 0.300666666666667 0.0248838251240042 0.00826579852216739 3.07603372826024 4.0547617501351 P06748 NPM1 P06748.S125.p_NPM1 P06748_S125s _1_1_125_125 P06748 P06748|P06748-2|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23277.23277.5 35.8 35.78 11.608 5 1 1 0 970.0782 4766.3922 S125s TMT10 104 (K) CGSGPVHISGQHLVAVEEDAEsEDEEEEDVKLLSISGK (R) CGS(0.0)GPVHIS(0.0)GQHLVAVEEDAES(0.99)EDEEEEDVKLLS(0.0)IS(0.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NPM1 32745.6 217 7 78.1 640.75 HUMAN 1 16.0408 20.8272 AVEGPCPSQESLSQE-p Q86W50;S450-p AVEGPCPSQESLSQE 0.965008281668802 0.00209247194223276 0.00866666666666667 0.786333333333333 0.298616266776013 41.7273834478273 0.00866666666666665 0.786333333333333 0.933551698250724 6.7183349955019e-05 0.0873276538505978 10.9362727884083 Q86W50 METTL16 Q86W50.S450.p_METTL16 Q86W50_S450s _1_1_450_450 Q86W50 Q86W50 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13025.13025.4 24.01 24.01 2.451 5 1 1 0 1071.4792 4202.9196 S450s TMT10 438 (R) EGEAAAVEGPCPsQESLSQEENPEPTEDERSEEK (G) EGEAAAVEGPCPS(0.99)QES(0.0)LS(0.0)QEENPEPT(0.0)EDERS(0.0)EEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S METTL16 64418.6 4 5 1049.1 183.96 HUMAN 1 0.2986 41.7274 AVEILPVSEKNLSLT-p Q6ZRS2;S2596-p AVEILPVSEKNLSLT 0.96030951217984 0.388640566152024 0.00733333333333332 0.196 0.339763744067097 5.4565022435983 0.00733333333333332 0.196 0.924748478830686 0.284675292556568 0.0989391646083783 1.18683693853302 Q6ZRS2 SRCAP Q6ZRS2.S2596.p_SRCAP Q6ZRS2_S2596s _1_1_2596_2596 Q6ZRS2 Q6ZRS2|Q6ZRS2-2|Q6ZRS2-3|A0A0A0MS59 Helicase SRCAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36282.36282.3 17.68 14.74 99 1 1 1 0 720.7499 2080.267 S2596s TMT10 2584 (K) DLLPVAVEILPVsEK (N) DLLPVAVEILPVS(1.0)EK K:TMT10,s:Phosphorylated S SRCAP 345203 1 9 219.1 428.72 HUMAN 1 0.3398 5.4565 AVEMRAGSQLGPGYQ-p Q02241;S943-p AVEMRAGSQLGPGYQ 0.6370040774071 0.199446593861233 0.0776666666666667 0.133 3.6528684394391 9.21162135958272 0.0776666666666667 0.133 0.431234160092215 0.119905157544749 0.850164886863608 1.84432130763514 Q02241 KIF23 Q02241.S943.p_KIF23 Q02241_S943s _1_1_943_943 Q02241 Q02241|H7BYN4|Q02241-2|Q02241-3 Kinesin-like protein KIF23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6470.6470.3 16.81 16.81 5.192 2 1 1 0 738.7111 2134.1558 S943s TMT10 941 (R) AGsQLGPGYQHHAQPK (R) AGS(0.99)QLGPGY(0.0)QHHAQPK K:TMT10,s:Phosphorylated S KIF23 111083.9 2 16 352.1 350.35 HUMAN 1 3.6529 9.2116 AVENGCCTPKEGRGA-p Q9Y6K1;T138-p AVENGCCTPKEGRGA 0.342398361264446 0.125857016432335 -0.207333333333333 -0.375333333333333 8.64728324600303 11.8687907351664 -0.207333333333333 -0.375333333333333 0.13654370264329 0.065031073994606 -1.74730647649904 -2.30794636643567 Q9Y6K1 DNMT3A Q9Y6K1.T138.p_DNMT3A Q9Y6K1_T138t _1_1_138_138 Q9Y6K1 Q9Y6K1|F8WE91|Q9Y6K1-3 DNA (cytosine-5)-methyltransferase 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5247.5247.3 13.61 13.61 99 1 1 1 0 672.6519 1935.9781 T138t TMT10 131 (R) AVENGCCtPKEGR (G) AVENGCCT(1.0)PKEGR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T DNMT3A 103454.1 3 2 2836.1 68.54 HUMAN 1 -8.6473 -11.8688 AVERVTKSPGETSKP-p Q9UNZ2;S140-p AVERVTKSPGETSKP 0.432584922937397 0.0125704846874007 -0.144333333333333 -0.474 6.70340998958996 26.5075243004453 -0.144333333333333 -0.474 0.213628406517186 0.00223484583563925 -1.40899014494626 -5.42868694295566 Q9UNZ2 NSFL1C Q9UNZ2.S140.p_NSFL1C Q9UNZ2_S140s _1_1_140_140 Q9UNZ2 Q9UNZ2-5|F2Z2K0|Q9UNZ2-6 NSFL1 cofactor p47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9572.9572.4 10.41 4.01 6.126 4 1 1 0 576.2991 2222.2082 S140s TMT10 140 (K) sPGETSKPRPFAGGGYR (L) S(0.99)PGET(0.0)S(0.0)KPRPFAGGGY(0.0)R K:TMT10,s:Phosphorylated S NSFL1C 40572.1 11 3 1108.1 176.24 HUMAN 1 -6.7034 -26.5075 AVESMVKSLERENIR-p E7EQY1;S19-p AVESMVKSLERENIR 0.285771772384668 0.208317797474835 -0.352 0.155 10.2648430837172 8.96379259883275 -0.352 0.155 0.0940839823197192 0.12694650249382 -2.02776265296936 1.80144988463055 E7EQY1 NotFound E7EQY1.S19.p_NotFound E7EQY1_S19s _1_1_19_19 E7EQY1 E7EQY1|Q96C01|C9J2Y4 Protein FAM136A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6983.6983.4 7.92 7.92 99 1 1 1 0 421.4899 1602.9692 S19s TMT10 19 (K) sLERENIRK (M) S(1.0)LERENIRK K:TMT10,s:Phosphorylated S FAM136A 27460 1 1 7066.1 7.92 HUMAN 1 -10.2648 8.9638 AVETASLSPSLVPAR-p Q2KHT3;S980-p AVETASLSPSLVPAR 0.995137505901969 0.831870513320841 -0.001 0.021 0.0416380176692752 1.11918522066373 -0.000999999999999993 0.021 0.990458305745223 0.772825561203028 -0.0125214179293456 0.303482869233388 Q2KHT3 CLEC16A Q2KHT3.S980.p_CLEC16A Q2KHT3_S980s _1_1_980_980 Q2KHT3 Q2KHT3|Q2KHT3-3 Protein CLEC16A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19659.19725.3 19.83 19.83 1.228 5 1 1 0 655.6824 1885.0592 S980s TMT10 971 (R) SAAVETASLsPSLVPAR (Q) S(0.0)AAVET(0.0)AS(0.0)LS(0.99)PS(0.0)LVPAR s:Phosphorylated S CLEC16A 118682.8 2 4 3223.1 56.9 HUMAN 1 -0.0416 1.1192 AVEYLDPSPEVQKKK-p O43684;S211-p AVEYLDPSPEVQKKK 0.495596036998798 0.0159232555438984 -0.102 0.347 5.61451406977284 24.8441169613924 -0.102 0.347 0.274503946758114 0.00327784417502563 -1.21557456476325 4.99821666918704 O43684 BUB3 O43684.S211.p_BUB3 O43684_S211s _1_1_211_211 O43684 O43684|O43684-2 Mitotic checkpoint protein BUB3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21289.21289.4 17.85 17.85 6.623 2 1 1 0 618.0953 2389.3946 S211s TMT10 203 (R) VAVEYLDPsPEVQKK (K) VAVEY(0.0)LDPS(0.99)PEVQKK K:TMT10,s:Phosphorylated S BUB3 37610.5 5 2 3162.1 58.97 HUMAN 1 -5.6145 24.8441 AVFARCLSSLKDERI-p P52209;S291-p AVFARCLSSLKDERI 0.39120743112417 0.370560861569132 0.162666666666667 -0.101 7.51585108880688 5.71846508016291 0.162666666666667 -0.101 0.177180079052998 0.268011538621836 1.55104174870194 -1.2339628830038 P52209 PGD P52209.S291.p_PGD P52209_S291s _1_1_291_291 P52209 P52209|P52209-2 6-phosphogluconate dehydrogenase, decarboxylating HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13769.13769.2 8.11 3.44 1.106 2 1 1 0 823.4258 1565.8721 S291s TMT10 289 (R) CLsSLKDER (I) CLS(0.99)S(0.0)LKDER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PGD 53652.5 1 4 3230.1 56.54 HUMAN 1 7.5159 -5.7185 AVFERSNSKPADGPS-p Q68DA7-5;S447-p AVFERSNSKPADGPS 0.973065146401358 0.00396452924207911 0.0156666666666667 0.706333333333333 0.231952544639149 35.4174530077467 0.0156666666666667 0.706333333333333 0.947992159665067 0.000287246469285436 0.0683098464481309 8.24916905812571 Q68DA7 FMN1 Q68DA7.5.S447.p_FMN1 Q68DA7-5_S447s _1_1_447_447 Q68DA7-5 Q68DA7-5|Q68DA7-3 Isoform 5 of Formin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5708.5708.3 14.44 9.6 2.13 4 1 1 0 686.355 1977.0856 S447s TMT10 445 (R) SNsKPADGPSDSK (S) S(0.0)NS(0.99)KPADGPS(0.0)DS(0.0)K K:TMT10,s:Phosphorylated S FMN1 132895.4 1 9 727.1 236.56 HUMAN 1 0.232 35.4175 AVFGRSQSLPGADSL-p Q9Y4A5;S2077-p AVFGRSQSLPGADSL 0.679937460483085 0.47290930778729 0.0716666666666667 0.0903333333333334 3.13975821948123 4.33605594637946 0.0716666666666667 0.0903333333333334 0.485315517906155 0.368463442523352 0.748658591079576 0.98066972881985 Q9Y4A5 TRRAP Q9Y4A5.S2077.p_TRRAP Q9Y4A5_S2077s _1_1_2077_2077 Q9Y4A5 Q9Y4A5|F2Z2U4|Q9Y4A5-2 Transformation/transcription domain-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23975.23975.3 15.72 15.72 2.355 3 1 1 0 836.4754 2427.4426 S2077s TMT10 2075 (R) SQsLPGADSLLAKPIDK (Q) S(0.0)QS(0.99)LPGADS(0.0)LLAKPIDK K:TMT10,s:Phosphorylated S TRRAP 442042.7 6 4 1141.1 173.21 HUMAN 1 3.1398 4.3361 AVFRGRMSMKEVDEQ-p P07437;S322-p AVFRGRMSMKEVDEQ 0.998180995519267 0.366751519192635 -0.000333333333333343 -0.096 0.0134860503425084 5.77740670536497 -0.000333333333333338 -0.096 0.996899538540357 0.264398708517792 -0.00406857500113836 -1.24452123226849 P07437 TUBB P07437.S322.p_TUBB P07437_S322s _1_1_322_322 P07437 Q13885|Q9BVA1|P68371|P07437|Q5JP53|Q5ST81 Tubulin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22353.22353.3 12.92 12.92 99 1 1 1 0 897.7912 2611.3861 S322s TMT10 321 (R) MsMKEVDEQMLNVQNK (N) MS(1.0)MKEVDEQMLNVQNK K:TMT10,s:Phosphorylated S TUBB 50126.4 5 18 333.1 357.15 HUMAN 1 -0.0135 -5.7774 AVFSVSGSPLAPQLT-p Q5VZL5;S306-p AVFSVSGSPLAPQLT 0.943523999347659 0.063344122419986 0.0116666666666667 0.219666666666667 0.497242228768248 15.9545804327457 0.0116666666666667 0.219666666666667 0.891817062465965 0.0253829419600651 0.142531483424 3.0573214061883 Q5VZL5 ZMYM4 Q5VZL5.S306.p_ZMYM4 Q5VZL5_S306s _1_1_306_306 Q5VZL5 Q5VZL5|Q5VZL5-4|Q5VZL5-2 Zinc finger MYM-type protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.35646.35646.3 23.69 20.89 1.148 9 1 1 0 1206.6301 3537.9027 S306s TMT10 297 (K) ISAVFSVSGsPLAPQLTTGFQPSLASSGMNK (M) IS(0.0)AVFS(0.0)VS(0.0)GS(0.99)PLAPQLT(0.0)T(0.0)GFQPS(0.0)LAS(0.0)S(0.0)GMNK K:TMT10,s:Phosphorylated S ZMYM4 176265.3 9 8 535.1 278.69 HUMAN 1 0.4972 15.9546 AVGGERRSLESCLLD-p Q6ZRV2;S785-p AVGGERRSLESCLLD 0.362466198001759 0.827950080485717 -0.123 -0.04 8.18924422195882 1.14682923088915 -0.123 -0.04 0.151731439409857 0.767921941919579 -1.66797440332483 -0.310282832237111 Q6ZRV2 FAM83H Q6ZRV2.S785.p_FAM83H Q6ZRV2_S785s _1_1_785_785 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29810.29810.3 11.25 11.25 8.2 3 1 1 0 942.4346 2745.3261 S785s Hydrogen 785 (R) sLESCLLDLRDSFAQQLHQEAER (Q) S(0.99)LES(0.0)CLLDLRDS(0.0)FAQQLHQEAER C:Carbamidomethylation,s:Phosphorylated S FAM83H 127633.5 5 16 7.1 1347.23 HUMAN 1 -8.1892 -1.1468 AVGGQQPSQPELPAP-p Q6ZT12-4;S15-p AVGGQQPSQPELPAP 0.896119733218354 0.893183549561935 0.025 0.0133333333333333 0.932870490381203 0.688230979471701 0.025 0.0133333333333333 0.806701660637728 0.853447679801158 0.256953882397213 0.193717457153121 Q6ZT12 UBR3 Q6ZT12.4.S15.p_UBR3 Q6ZT12-4_S15s _1_1_15_15 Q6ZT12-4 Q6ZT12-4 Isoform 4 of E3 ubiquitin-protein ligase UBR3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30795.30795.3 15.8 15.05 99 1 1 1 0 950.8174 2770.4937 S15s Acetyl 2 (M) AAAAAAAVGGQQPsQPELPAPGLALDK (A) AAAAAAAVGGQQPS(1.0)QPELPAPGLALDK K:TMT10,s:Phosphorylated S UBR3 219675.2 2 1 4382.1 32.26 HUMAN 1 0.9329 0.6882 AVGKEGGSHTGSKVS-p O75052;S249-p AVGKEGGSHTGSKVS 0.126572282263763 0.571204137823196 0.381666666666667 0.104333333333333 18.6170156859864 3.27871786231589 0.381666666666667 0.104333333333333 0.0137498649125607 0.470032852685424 3.5882316849638 0.77636125639586 O75052 NOS1AP O75052.S249.p_NOS1AP O75052_S249s _1_1_249_249 O75052 O75052|O75052-3 Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12395.12395.4 14.03 14.03 1.534 4 1 1 0 646.3418 2502.3767 S249s TMT10 236 (R) GVTDLDAVGKEGGsHTGSK (V) GVT(0.0)DLDAVGKEGGS(0.99)HT(0.0)GS(0.0)K K:TMT10,s:Phosphorylated S NOS1AP 56491.1 1 3 1378.1 148.59 HUMAN 1 18.617 3.2787 AVGQMGWSGGLSLRD-p Q9C0C2;S1195-p AVGQMGWSGGLSLRD 0.691500350156875 0.538443211325552 -0.0563333333333333 -0.069 3.00323483343528 3.61682144578422 -0.0563333333333334 -0.069 0.500814064350883 0.434828353896223 -0.721069253137745 -0.843004345814477 Q9C0C2 TNKS1BP1 Q9C0C2.S1195.p_TNKS1BP1 Q9C0C2_S1195s _1_1_1195_1195 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24289.24289.2 17.95 12.34 2.382 3 1 1 0 972.4652 1863.9584 S1195s TMT10 1186 (R) ESAVGQMGWsGGLSLR (D) ES(0.0)AVGQMGWS(0.99)GGLS(0.0)LR s:Phosphorylated S TNKS1BP1 182819.3 5 51 4.1 2105.7 HUMAN 1 -3.0032 -3.6168 AVGTKRGSDELFSTC-p A0A0U1RRM4;S16-p AVGTKRGSDELFSTC 0.384620913819272 0.0198168067084765 0.121333333333333 0.339 7.68162808126425 23.3607274964206 0.121333333333333 0.339 0.170544293344631 0.00461240304691508 1.57987793571873 4.63492792858371 A0A0U1RRM4 NotFound A0A0U1RRM4.S16.p_NotFound A0A0U1RRM4_S16s _1_1_16_16 A0A0U1RRM4 A0A0U1RRM4|P26599-3|P26599-2 Polypyrimidine tract-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23718.23718.4 23.38 23.38 3.848 9 1 1 0 965.6949 3779.8005 S16s TMT10 14 (K) RGsDELFSTCVTNGPFIMSSNSASAANGNDSK (K) RGS(0.99)DELFS(0.0)T(0.0)CVT(0.0)NGPFIMS(0.0)S(0.0)NS(0.0)AS(0.0)AANGNDS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PTBP1 62691.3 14 1 1244.1 162.7 HUMAN 1 7.6816 23.3607 AVGVGRPSFGLGTPK-p O14686-3;S1801-p AVGVGRPSFGLGTPK 0.833073343145331 0.00352917669002825 0.0296666666666667 -0.869333333333333 1.52936071871933 36.6356632008271 0.0296666666666667 -0.869333333333334 0.703175819714876 0.000216986982258052 0.401854974748035 -8.71631388871709 O14686 KMT2D O14686.3.S1801.p_KMT2D O14686-3_S1801sT1806t_2_2_1801_1806 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31673.31673.4 12.61 12.61 99 2 2 2 0 598.8185 2232.3269 S1801s T1806t TMT10 1791 (K) ALFAVGVGRPsFGLGtPK (A) ALFAVGVGRPS(1.0)FGLGT(1.0)PK K:TMT10,s:Phosphorylated S,t:Phosphorylated T KMT2D 600227.3 2 51 17.1 1042.08 HUMAN 1 1.5294 -36.6357 AVHKQGPSPVSPNAL-p Q5VWQ8;S992-p AVHKQGPSPVSPNAL 0.0431670381948327 0.026369271971688 -0.569666666666667 -0.565666666666667 30.316681717464 21.43940586459 -0.569666666666667 -0.565666666666667 0.000929676446660025 0.00717892495645583 -6.52905629674256 -4.19061291782592 Q5VWQ8 DAB2IP Q5VWQ8.S992.p_DAB2IP Q5VWQ8_S992s _1_1_992_992 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11935.11935.2 9.73 9.73 1.486 2 1 1 0 823.9047 1566.8437 S992s TMT10 989 (K) QGPsPVSPNALDR (T) QGPS(0.99)PVS(0.0)PNALDR s:Phosphorylated S DAB2IP 132592.9 1 20 281.1 388.28 HUMAN 1 -30.3167 -21.4394 AVHLWRFSGGYPALM-p Q9BPW8;S129-p AVHLWRFSGGYPALM 0.846669419054343 0.00950062481428375 -0.037 0.468333333333333 1.39861527951193 28.533672900317 -0.037 0.468333333333333 0.724666978726539 0.00140162782332331 -0.371080189366774 5.98921462509603 Q9BPW8 NIPSNAP1 Q9BPW8.S129.p_NIPSNAP1 Q9BPW8_S129s _1_1_129_129 Q9BPW8 Q9BPW8 Protein NipSnap homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27325.27325.3 12.21 12.21 4.487 2 1 1 0 710.3267 2049.0008 S129s TMT10 128 (R) FsGGYPALMDCMNK (L) FS(0.99)GGY(0.0)PALMDCMNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NIPSNAP1 33480.5 1 2 4037.1 38.77 HUMAN 1 -1.3986 28.5337 AVHPENLSLDSSCFS-p H3BNW8;S26-p AVHPENLSLDSSCFS 0.43392918437413 0.687458179244175 0.138333333333333 -0.075 6.68262258853471 2.22823947267615 0.138333333333333 -0.075 0.214653384813568 0.598654226171891 1.4053354101355 -0.558706666396502 H3BNW8 TMC7 H3BNW8.S26.p_TMC7 H3BNW8_S26s _1_1_26_26 H3BNW8 H3BNW8|Q7Z402 Transmembrane channel-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32047.32047.4 19.25 19.25 1.141 7 1 1 0 956.9614 3744.8529 S26s TMT10 17 (R) QPAVHPENLsLDSSCFSSPPVNFLQELPSYR (S) QPAVHPENLS(0.99)LDS(0.0)S(0.0)CFS(0.0)S(0.0)PPVNFLQELPS(0.0)Y(0.0)R C:Carbamidomethylation,s:Phosphorylated S TMC7 88362.5 1 1 3846.1 41.76 HUMAN 1 6.6826 -2.2282 AVHWRTHSGEKPYKC-p Q96IR2;S630-p AVHWRTHSGEKPYKC 0.518663523779988 0.00298089814036961 -0.143333333333333 -0.64 5.26844130377932 37.9782353758018 -0.143333333333333 -0.64 0.29727327632097 0.000159285580433417 -1.15303169006406 -9.25815096931997 Q96IR2 ZNF845 Q96IR2.S630.p_ZNF845 Q96IR2_S630s _1_1_630_630 Q96IR2 Q96IR2|Q5SVQ8|Q9Y2X9|Q9Y2X9-2|Q9UC07|Q147U1 Zinc finger protein 845 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5705.5705.3 9.6 2.25 2.414 3 1 1 0 605.3323 1734.0153 S630s TMT10 628 (R) THsGEKPYK (C) T(0.0)HS(0.99)GEKPY(0.0)K K:TMT10,s:Phosphorylated S ZNF845 116782.1 2 116 240.1 415.72 HUMAN 1 -5.2684 -37.9782 AVIPINGSPRTPRRG-p P06400;S249-p AVIPINGSPRTPRRG 0.60280513886276 0.0164716368137852 -0.0746666666666667 -0.364666666666667 4.0601538409951 24.626900543127 -0.0746666666666667 -0.364666666666667 0.392631026906574 0.00344595772869858 -0.928610730346435 -4.94384773552597 P06400 RB1 P06400.S249.p_RB1 P06400_S249s _1_1_249_249 P06400 P06400 Retinoblastoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16307.16307.3 13.93 10.72 13.928 2 1 1 0 478.5954 1353.8052 S249s TMT10 241 (K) TAVIPINGsPR (T) T(0.0)AVIPINGS(0.99)PR s:Phosphorylated S RB1 107013.3 13 2 155.1 502.88 HUMAN 1 -4.0602 -24.6269 AVIQHRPSRQYATLD-p O14828;S32-p AVIQHRPSRQYATLD 0.933823326424321 0.0314410880455276 -0.0136666666666667 0.327333333333333 0.585272549556289 20.2956463980212 -0.0136666666666667 0.327333333333333 0.873922146264602 0.00934190314288929 -0.166348034902804 3.93893293400598 O14828 SCAMP3 O14828.S32.p_SCAMP3 O14828_S32s _1_1_32_32 O14828 O14828 Secretory carrier-associated membrane protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22674.22674.4 17.11 15.61 2.207 2 1 1 0 850.6559 3319.6293 S32s TMT10 6 (R) DGGNPFAEPSELDNPFQDPAVIQHRPsR (Q) DGGNPFAEPS(0.0)ELDNPFQDPAVIQHRPS(0.99)R s:Phosphorylated S SCAMP3 38685.6 3 2 2601.1 77.12 HUMAN 1 -0.5853 20.2956 AVKHRKKSLIRLDKV-p Q8WXH0;S1469-p AVKHRKKSLIRLDKV 0.416694906313078 0.0256616785489657 -0.221333333333333 0.546 7.01632425972901 21.638479670148 -0.221333333333333 0.546 0.198777660102002 0.0068572823655961 -1.46387038613128 4.23536066003656 Q8WXH0 SYNE2 Q8WXH0.S1469.p_SYNE2 Q8WXH0_S1469s _1_1_1469_1469 Q8WXH0 Q8WXH0-2|A0A0A0MRE3|G3V5X4 Nesprin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17032.17032.3 11.5 1.64 99 1 1 1 0 461.6104 1302.8509 S1469s TMT10 1469 (K) sLIRLDK (V) S(1.0)LIRLDK K:TMT10,s:Phosphorylated S SYNE2 802304.8 3 6 188.1 472.65 HUMAN 1 -7.0163 21.6385 AVKIEKLSDDEEVDI-p Q5VVJ2;S218-p AVKIEKLSDDEEVDI 0.45405174275597 0.0217516747471321 -0.153 0.328333333333333 6.32651052331133 22.7275918736348 -0.153 0.328333333333333 0.232996258807699 0.00533630707205226 -1.3425269978422 4.48537726847897 Q5VVJ2 MYSM1 Q5VVJ2.S218.p_MYSM1 Q5VVJ2_S218s _1_1_218_218 Q5VVJ2 Q5VVJ2 Histone H2A deubiquitinase MYSM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27989.27989.5 21.72 19.15 7.65 5 1 1 0 746.7748 3649.8787 S218s TMT10 214 (K) IEKLsDDEEVDITDEVDELSSQTPQK (N) IEKLS(0.99)DDEEVDIT(0.0)DEVDELS(0.0)S(0.0)QT(0.0)PQK K:TMT10,s:Phosphorylated S MYSM1 96171.6 2 2 2993.1 63.85 HUMAN 1 -6.3265 22.7276 AVKMLAESDESGDEE-p P22059;S190-p AVKMLAESDESGDEE 0.878443024385905 0.171704078572457 -0.0233333333333333 0.168666666666667 1.10567072703772 10.0601306304924 -0.0233333333333333 0.168666666666667 0.775234206471641 0.0986249819991282 -0.300178744328541 1.99134842915731 P22059 OSBP P22059.S190.p_OSBP P22059_S190s _1_1_190_190 P22059 P22059 Oxysterol-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20332.20332.4 22.2 22.2 1.132 7 1 1 0 888.4182 3470.6845 S190s TMT10 186 (K) MLAEsDESGDEESVSQTDKTELQNTLR (T) MLAES(0.99)DES(0.0)GDEES(0.0)VS(0.0)QT(0.0)DKT(0.0)ELQNT(0.0)LR K:TMT10,s:Phosphorylated S OSBP 90274.8 3 1 468.1 302.79 HUMAN 1 -1.1057 10.0601 AVKMLEDSQRRTEEE-p Q6P996;S30-p AVKMLEDSQRRTEEE 0.0658438295661245 0.309061578477141 -0.554666666666667 0.103333333333333 25.5252514622959 6.74049820738395 -0.554666666666667 0.103333333333333 0.002802043374922 0.211811813823362 -5.17804876654946 1.41513133440119 Q6P996 PDXDC1 Q6P996.S30.p_PDXDC1 Q6P996_S30s _1_1_30_30 Q6P996 H3BND4|Q6P996|Q6P996-5|Q6P996-3 Pyridoxal-dependent decarboxylase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7121.7121.4 9.5 9.5 1.599 2 1 1 0 590.7889 2280.1654 S30s TMT10 26 (K) MLEDsQRRTEEENGK (K) MLEDS(0.99)QRRT(0.0)EEENGK K:TMT10,s:Phosphorylated S PDXDC1 87618.2 1 2 600.1 263.32 HUMAN 1 -25.5253 6.7405 AVKQETESLHGSSGK-p Q9NV70;S459-p AVKQETESLHGSSGK 0.108274227113564 0.0923945894091804 -0.486333333333333 0.381666666666667 20.2570314281019 13.6812600344161 -0.486333333333333 0.381666666666667 0.00942533634826794 0.0428424202087931 -3.93433049979219 2.63304533101894 Q9NV70 EXOC1 Q9NV70.S459.p_EXOC1 Q9NV70_S459sS463s_2_2_459_463 Q9NV70 Q9NV70 Exocyst complex component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9621.9621.4 12.05 12.05 1.251 5 2 2 0 656.0752 2461.3501 S459s S463s TMT10 450 (K) ESAVKQETEsLHGsSGK (L) ES(0.0)AVKQET(0.0)ES(0.99)LHGS(0.99)S(0.0)GK K:TMT10,s:Phosphorylated S EXOC1 102835.5 2 3 871.1 209.68 HUMAN 1 -20.257 13.6813 AVKYLMASDPNLQVL-p Q9Y446-2;S346-p AVKYLMASDPNLQVL 0.995222800843425 0.181654972196238 0.000999999999999992 0.158333333333333 0.0389054297543176 9.74492650488442 0.000999999999999994 0.158333333333333 0.991081699815282 0.106049188479288 0.0117033017246398 1.93666682049249 Q9Y446 PKP3 Q9Y446.2.S346.p_PKP3 Q9Y446-2_S346s _1_1_346_346 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28849.29060.3 21.57 19.19 11.14 3 1 1 0 924.1515 2690.474 S346s TMT10 342 (K) YLMAsDPNLQVLGAAYIQHK (C) Y(0.0)LMAS(0.99)DPNLQVLGAAY(0.0)IQHK K:TMT10,s:Phosphorylated S PKP3 89109.7 28 12 454.1 307.47 HUMAN 1 0.0389 9.7449 AVLASQPSIPRSVGK-p Q96D71;S736-p AVLASQPSIPRSVGK 0.451989274376449 0.162191003677492 0.179 -0.204 6.3632197834872 10.3858905654281 0.179 -0.204 0.231035130094886 0.09149786142829 1.3490199985967 -2.04797543613431 Q96D71 REPS1 Q96D71.S736.p_REPS1 Q96D71_S736s _1_1_736_736 Q96D71 Q96D71|Q96D71-3|Q96D71-4|E9PMG1 RalBP1-associated Eps domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29696.29696.3 21.52 19.46 1.565 3 1 1 0 630.3535 1809.0796 S736s TMT10 724 (K) TGVLAAVLASQPsIPR (S) T(0.0)GVLAAVLAS(0.0)QPS(0.99)IPR s:Phosphorylated S REPS1 86831.7 1 35 226.1 425.21 HUMAN 1 6.3632 -10.3859 AVLDPALSPQRRREL-p A7E2V4-4;S437-p AVLDPALSPQRRREL 0.911605742223265 0.342329712407284 -0.0223333333333333 0.0966666666666667 0.784022857956455 6.16686042337944 -0.0223333333333334 0.0966666666666667 0.83482935980566 0.241720763677822 -0.218789445597662 1.31391365578865 A7E2V4 ZSWIM8 A7E2V4.4.S437.p_ZSWIM8 A7E2V4-4_S437s _1_1_437_437 A7E2V4-4 A7E2V4-4|A7E2V4-3|S4R410|A7E2V4-5|S4R393|S4R3H3|H7BZ52 Isoform 4 of Zinc finger SWIM domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25116.25116.3 12.73 12.73 99 1 1 1 0 530.2937 1508.8998 S437s TMT10 429 (R) LAVLDPALsPQR (R) LAVLDPALS(1.0)PQR s:Phosphorylated S ZSWIM8 199945.4 2 3 805.1 222.5 HUMAN 1 -0.784 6.1669 AVLEQHGSQPSNSYP-p P38398;S1423-p AVLEQHGSQPSNSYP 0.20055874973276 0.0508134767999901 0.223666666666667 -0.444666666666667 13.573559096963 17.2839356759444 0.223666666666667 -0.444666666666667 0.0439181553208605 0.018689876533238 2.61495106512603 -3.3161894208788 P38398 BRCA1 P38398.S1423.p_BRCA1 P38398_S1423s _1_1_1423_1423 P38398 P38398-7|P38398-4|P38398-8|P38398-3|P38398-5|P38398-6 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35429.35429.4 28.74 28.74 2.342 11 1 1 0 1403.4301 5530.7172 S1423s TMT10 1407 (K) LQQEMAELEAVLEQHGsQPSNSYPSIISDSSALEDLRNPEQSTSEK (A) LQQEMAELEAVLEQHGS(0.99)QPS(0.0)NS(0.0)Y(0.0)PS(0.0)IIS(0.0)DS(0.0)S(0.0)ALEDLRNPEQS(0.0)T(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S BRCA1 210227.6 2 16 106.1 588.91 HUMAN 1 13.5736 -17.2839 AVLHTDSSLPFSFPD-p Q8NCE2;S576-p AVLHTDSSLPFSFPD 0.459669818817872 0.957832844407715 -0.105666666666667 0.00733333333333334 6.22303371420507 0.269385219778932 -0.105666666666667 0.00733333333333333 0.238614388721411 0.939856345687441 -1.32419954128049 0.0790131838104946 Q8NCE2 MTMR14 Q8NCE2.S576.p_MTMR14 Q8NCE2_S576s _1_1_576_576 Q8NCE2 Q8NCE2 Myotubularin-related protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33798.33798.4 24.43 24.43 1.123 7 1 1 0 967.7298 3787.9163 S576s TMT10 569 (R) AVLHTDSsLPFSFPDELPNSCLLAALSDRETR (L) AVLHT(0.0)DS(0.0)S(0.99)LPFS(0.0)FPDELPNS(0.0)CLLAALS(0.0)DRET(0.0)R C:Carbamidomethylation,s:Phosphorylated S MTMR14 73057.9 2 4 1808.1 113.5 HUMAN 1 -6.223 0.2694 AVLKGMGSGQLQNLG-p O14618;S80-p AVLKGMGSGQLQNLG 0.536318608089857 0.597316506763798 0.087 -0.053 5.00647567153846 3.03010011369579 0.087 -0.053 0.315756596963996 0.497725611260792 1.10524467767828 -0.726416823164295 O14618 CCS O14618.S80.p_CCS O14618_S80s _1_1_80_80 O14618 O14618|J3KNF4|E9PK03 Copper chaperone for superoxide dismutase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35326.35326.3 18.91 17.6 18.912 2 1 1 0 972.8482 2836.5665 S80s TMT10 77 (K) GMGsGQLQNLGAAVAILGGPGTVQGVVR (F) GMGS(0.99)GQLQNLGAAVAILGGPGT(0.0)VQGVVR s:Phosphorylated S CCS 29553.6 1 1 5006.1 23.97 HUMAN 1 5.0065 -3.0301 AVLLPKKTESQKTKS-p Q9BTM1;T121-p AVLLPKKTESQKTKS 0.55663840787346 0.00234850053989814 0.102 -0.984666666666667 4.69778013971261 40.413667674227 0.102 -0.984666666666667 0.339017397795943 9.09145163247467e-05 1.04837184018063 -10.3190011926674 Q9BTM1 H2AFJ Q9BTM1.T121.p_H2AFJ Q9BTM1_T121t _1_1_121_121 Q9BTM1 Q9BTM1 Histone H2A.J HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29966.29966.4 17.01 17.01 1.146 3 1 1 0 908.0438 3549.1913 T121t TMT10 101 (K) VTIAQGGVLPNIQAVLLPKKtESQK (T) VT(0.0)IAQGGVLPNIQAVLLPKKT(0.99)ES(0.0)QK K:TMT10,t:Phosphorylated T H2AFJ 14019.2 4 10 3203.3 57.59 HUMAN 1 4.6978 -40.4137 AVLMDGMTESDTASV-p P51114-2;T522-p AVLMDGMTESDTASV 0.547942963034024 0.0393803326756332 0.091 0.270333333333333 4.82310100036232 18.8470695872109 0.091 0.270333333333333 0.329374444391817 0.0130404639019524 1.07153846895649 3.63261922726573 P51114 FXR1 P51114.2.T522.p_FXR1 P51114-2_T522t _1_1_522_522 P51114-2 P51114-2|E9PFF5|E7EU85 Isoform 2 of Fragile X mental retardation syndrome-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17548.17548.4 22.81 22.81 1.136 5 1 1 0 888.172 3469.6939 T522t TMT10 510 (R) RTDEDAVLMDGMtESDTASVNENGLGKR (C) RT(0.0)DEDAVLMDGMT(0.99)ES(0.0)DT(0.0)AS(0.0)VNENGLGKR K:TMT10,t:Phosphorylated T FXR1 61190.3 27 13 553.2 273.48 HUMAN 1 4.8231 18.8471 AVLPAPASPPRPFSC-p Q9NW07;S146-p AVLPAPASPPRPFSC 0.885820345057877 0.161359916245587 0.023 0.142666666666667 1.03561212656103 10.4167434085292 0.023 0.142666666666667 0.787841379471053 0.090850152186381 0.2827876528617 2.05334561480279 Q9NW07 ZNF358 Q9NW07.S146.p_ZNF358 Q9NW07_S146s _1_1_146_146 Q9NW07 Q9NW07 Zinc finger protein 358 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30667.30667.4 26.35 26.35 2.23 8 1 1 0 1074.7883 4216.1732 S146s TMT10 120 (K) VDPISSGLTATPQVLATSPAVLPAPAsPPRPFSCPDCGR (A) VDPIS(0.0)S(0.0)GLT(0.0)AT(0.0)PQVLAT(0.0)S(0.0)PAVLPAPAS(0.99)PPRPFS(0.0)CPDCGR C:Carbamidomethylation,s:Phosphorylated S ZNF358 60426.9 4 1 3341.1 53.37 HUMAN 1 1.0356 10.4167 AVLVKKSSMPWNKRQ-p Q08J23;S432-p AVLVKKSSMPWNKRQ 0.437474026302364 0.0243788336347201 -0.106666666666667 0.398666666666667 6.6138082406883 21.9751016285986 -0.106666666666667 0.398666666666667 0.218081675894737 0.00634585050978192 -1.39322819785832 4.31168518765603 Q08J23 NSUN2 Q08J23.S432.p_NSUN2 Q08J23_S432s _1_1_432_432 Q08J23 Q08J23|Q08J23-2|Q08J23-3 tRNA (cytosine(34)-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14358.14358.3 7.83 7.83 1.452 2 1 1 0 582.3196 1664.9761 S432s TMT10 430 (K) KSsMPWNK (R) KS(0.0)S(0.99)MPWNK K:TMT10,s:Phosphorylated S NSUN2 87267.9 1 1 1957.1 105.19 HUMAN 1 -6.6138 21.9751 AVLVLPPSPGPRSSR-p Q96JY6-5;S447-p AVLVLPPSPGPRSSR 0.714570848433642 0.0979505986643376 -0.0503333333333333 -0.191666666666667 2.75142525004834 13.338837882722 -0.0503333333333333 -0.191666666666667 0.530710249308217 0.0463570948882476 -0.669455355577104 -2.57085203083967 Q96JY6 PDLIM2 Q96JY6.5.S447.p_PDLIM2 Q96JY6-5_S447s _1_1_447_447 Q96JY6-5 Q96JY6-5|Q96JY6-3|A0A087WVI1|Q96JY6-4 Isoform 5 of PDZ and LIM domain protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20552.21307.3 21.99 20.37 21.993 2 1 1 0 614.6629 1762.0061 S447s TMT10 436 (R) AGDSAVLVLPPsPGPR (S) AGDS(0.0)AVLVLPPS(0.99)PGPR s:Phosphorylated S PDLIM2 63315 8 9 1306.1 155.86 HUMAN 1 -2.7514 -13.3388 AVNKAIKSPPGFSAK-p M0QXA7;S152-p AVNKAIKSPPGFSAK 0.112544694105773 0.00817736014367236 -0.317666666666667 -0.622333333333333 19.8064604635823 29.7119647240556 -0.317666666666667 -0.622333333333333 0.0104557202201938 0.00106857135412783 -3.83753726544521 -6.33504990433545 M0QXA7 WIZ M0QXA7.S152.p_WIZ M0QXA7_S152s _1_1_152_152 M0QXA7 M0QXA7|O95785-3|O95785-4|B9EGQ5 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15868.15868.3 11.22 5.49 4.524 2 1 1 0 624.0314 1790.1143 S152s TMT10 149 (K) AIKsPPGFSAK (G) AIKS(0.99)PPGFS(0.0)AK K:TMT10,s:Phosphorylated S WIZ 104190.1 1 1 195.1 461.51 HUMAN 1 -19.8065 -29.712 AVNQRGRSPRSPSGH-p Q8WX93;S1101-p AVNQRGRSPRSPSGH 0.609605623677079 0.0989466631496367 -0.0726666666666667 -0.183666666666667 3.98184737407468 13.2785297557266 -0.0726666666666667 -0.183666666666667 0.39977466000128 0.0470053211726415 -0.913658133939275 -2.55993905714536 Q8WX93 PALLD Q8WX93.S1101.p_PALLD Q8WX93_S1101sS1104s_2_2_1101_1104 Q8WX93 Q8WX93|Q8WX93-5|Q8WX93-9|Q8WX93-2|Q8WX93-3|Q8WX93-8|Q8WX93-4|Q8WX93-7 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.1705.1848.4 14.61 14.61 1.544 3 2 2 0 422.4398 1526.8047 S1101s S1104s Hydrogen 1099 (R) GRsPRsPSGHPHVR (R) GRS(0.99)PRS(0.99)PS(0.0)GHPHVR s:Phosphorylated S PALLD 151930.4 17 18 338.1 354.43 HUMAN 1 -3.9818 -13.2785 AVNSDSDSEFGIPKK-p Q02880;S1526-p AVNSDSDSEFGIPKK 0.368749698795163 0.0272277284827704 0.125333333333333 0.304333333333333 8.03360762964904 21.2288879176286 0.125333333333333 0.304333333333333 0.157267591959988 0.00753548497503602 1.64099015257067 4.14360284117039 Q02880 TOP2B Q02880.S1526.p_TOP2B Q02880_S1522sS1524sS1526s_3_3_1522_1526 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24437.24437.5 16.08 16.35 99 3 3 3 0 570.4752 2608.4437 S1522s S1524s S1526s TMT10 1516 (K) VVEAVNsDsDsEFGIPKK (T) VVEAVNS(1.0)DS(1.0)DS(1.0)EFGIPKK K:TMT10,s:Phosphorylated S TOP2B 184233.7 16 60 71.1 658.36 HUMAN 1 8.0336 21.2289 AVNSYYPTPPAPMPG-p Q99732-2;T35-p AVNSYYPTPPAPMPG 0.347343656997277 0.733910635068834 0.144666666666667 -0.066 8.53258808626881 1.8520671127256 0.144666666666667 -0.066 0.140197797639547 0.652819755876701 1.72744927919617 -0.47573239778596 Q99732 LITAF Q99732.2.T35.p_LITAF Q99732-2_T35t_1_1_35_35 Q99732-2 Q99732-2 Isoform 2 of Lipopolysaccharide-induced tumor necrosis factor-alpha factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32138.32138.4 18.52 18.52 1.145 16 1 1 0 1392.1649 5484.6671 N30n T35t Acetyl 2 (M) SVPGPYQAATGPSSAPSAPPSYEETVAVnSYYPtPPAPMPGPTTGLVTGPDGK (G) S(0.0)VPGPY(0.0)QAAT(0.0)GPS(0.0)S(0.0)APS(0.0)APPS(0.0)Y(0.0)EET(0.0)VAVN(1.0)S(0.0)Y(0.0)Y(0.0)PT(0.99)PPAPMPGPT(0.0)T(0.0)GLVT(0.0)GPDGK K:TMT10,n:Deamidated,t:Phosphorylated T LITAF 24245.2 1 2 5184.1 22.08 HUMAN 1 8.5326 -1.8521 AVNTQALSGAGILRM-p O60749;S277-p AVNTQALSGAGILRM 0.680523884641004 0.00899132100343272 0.08 -0.481333333333333 3.13505191629693 28.9715071038365 0.08 -0.481333333333333 0.485841723068646 0.0012672120372123 0.747711883565789 -6.11594464296492 O60749 SNX2 O60749.S277.p_SNX2 O60749_S277s _1_1_277_277 O60749 O60749|O60749-2 Sorting nexin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20101.20136.2 16.71 16.71 4.687 2 1 1 0 840.4552 1599.938 S277s TMT10 270 (R) AVNTQALsGAGILR (M) AVNT(0.0)QALS(0.99)GAGILR s:Phosphorylated S SNX2 58584.2 4 4 1560.2 131.56 HUMAN 1 3.1351 -28.9715 AVPAPPASGPRAPAK-p A0A0J9YWL0;S531-p AVPAPPASGPRAPAK 0.916056654296661 0.337244240375363 -0.036 -0.173333333333333 0.744557271940735 6.25418713815641 -0.036 -0.173333333333333 0.842450268044581 0.236908850869205 -0.208515952170558 -1.32939235164221 A0A0J9YWL0 NotFound A0A0J9YWL0.S531.p_NotFound A0A0J9YWL0_S531s _1_1_531_531 A0A0J9YWL0 A0A0J9YWL0|Q9Y4K1 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12367.12367.4 10.82 10.82 1.174 2 1 1 0 694.884 2696.55 S531s Hydrogen 521 (R) ALEAVPAPPAsGPRAPAKESPPK (R) ALEAVPAPPAS(0.99)GPRAPAKES(0.0)PPK K:TMT10-Lys-Only,s:Phosphorylated S CRYBG1 233643.7 1 16 79.1 640.71 HUMAN 1 -0.7446 -6.2542 AVPGQVISPQSSSSG-p O60271;S1238-p AVPGQVISPQSSSSG 0.231984670450118 0.0979505986643376 -0.185333333333333 0.185666666666667 12.2051403616392 13.3385356356596 -0.185333333333333 0.185666666666667 0.0601846811220209 0.0463603212205881 -2.36877447463815 2.57079730837304 O60271 SPAG9 O60271.S1238.p_SPAG9 O60271_S1238s _1_1_1238_1238 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-9 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30506.30506.3 21.82 19.87 2.198 7 1 1 0 1021.5225 2982.5824 S1238s TMT10 1228 (K) FFVAVPGQVIsPQSSSSGTDLTGDK (A) FFVAVPGQVIS(0.99)PQS(0.0)S(0.0)S(0.0)S(0.0)GT(0.0)DLT(0.0)GDK K:TMT10,s:Phosphorylated S SPAG9 147001.6 4 39 84.1 629.25 HUMAN 1 -12.2051 13.3385 AVPSQKRT_______-p P31949;T105-p AVPSQKRT_______ 0.0506176118125653 0.0384937754078548 0.444333333333333 -0.487666666666667 28.5744156167149 19.0047553257951 0.444333333333333 -0.487666666666667 0.00138854013824263 0.0125754770049382 6.00984232758497 -3.66532648093276 P31949 S100A11 P31949.T105.p_S100A11 P31949_T105t _1_1_105_105 P31949 P31949 Protein S100-A11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5060.5060.3 7.08 4.01 5.206 2 1 1 0 475.6051 1344.8364 T105t TMT10 98 (K) AVPSQKRt (-) AVPS(0.0)QKRT(0.99) K:TMT10,t:Phosphorylated T S100A11 11854.4 3 4 2333.1 87.44 HUMAN 1 28.5744 -19.0048 AVPTSPPSPEVGTIR-p A7MCY6;S534-p AVPTSPPSPEVGTIR 0.707346369684743 0.574449641595073 0.096 -0.0616666666666667 2.82712829091567 3.24621182609278 0.096 -0.0616666666666667 0.521539457492632 0.473564149584119 0.685075930819526 -0.769878777703942 A7MCY6 TBKBP1 A7MCY6.S534.p_TBKBP1 A7MCY6_S521sS534s_2_2_521_534 A7MCY6 A7MCY6 TANK-binding kinase 1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25658.25658.3 18.72 18.72 3.155 5 2 2 0 966.4354 2737.3518 S521s S534s TMT10 519 (K) QPsEEDEWAVPTSPPsPEVGTIR (C) QPS(0.99)EEDEWAVPT(0.0)S(0.0)PPS(0.99)PEVGT(0.0)IR s:Phosphorylated S TBKBP1 68613.7 2 6 2261.1 90.94 HUMAN 1 2.8271 -3.2462 AVPVLPASPPPKDSL-p Q9UBC2-2;S229-p AVPVLPASPPPKDSL 0.964405330095504 0.0176587357769061 0.00866666666666666 -0.444 0.304063283230861 24.1510835372807 0.00866666666666667 -0.444 0.932381551241634 0.00384495840795592 0.0888702436219462 -4.82617704392139 Q9UBC2 EPS15L1 Q9UBC2.2.S229.p_EPS15L1 Q9UBC2-2_S229s _1_1_229_229 Q9UBC2-2 Q9UBC2-2|M0R165|Q9UBC2-3|Q9UBC2-4|M0R2S2 Isoform 2 of Epidermal growth factor receptor substrate 15-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26098.26303.3 25.9 24.18 7.691 3 1 1 0 895.1712 2603.5325 S229s TMT10 217 (K) TVFPGAVPVLPAsPPPKDSLR (S) T(0.0)VFPGAVPVLPAS(0.99)PPPKDS(0.0)LR K:TMT10,s:Phosphorylated S EPS15L1 99718.3 17 4 109.1 576.24 HUMAN 1 0.3041 -24.1511 AVPVPNMTPSGVGRE-p Q6P996;T414-p AVPVPNMTPSGVGRE 0.765856070253823 0.247336675766281 0.0583333333333333 -0.126666666666667 2.22549547214466 7.99390969454169 0.0583333333333334 -0.126666666666667 0.599032593074555 0.158711731809076 0.558180132421068 -1.63358671496527 Q6P996 PDXDC1 Q6P996.T414.p_PDXDC1 Q6P996_T414t _1_1_414_414 Q6P996 H3BND4|Q6P996|Q6P996-5|Q6P996-4|Q6P996-3|Q86XE2|Q6P996-2|Q6XYB5 Pyridoxal-dependent decarboxylase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15646.15646.3 12.72 12.72 3.509 2 1 1 0 659.3372 1896.0323 T414t TMT10 407 (K) AVPVPNMtPSGVGRER (H) AVPVPNMT(0.99)PS(0.0)GVGRER t:Phosphorylated T PDXDC1 87618.2 4 6 600.1 263.32 HUMAN 1 2.2255 -7.9939 AVQGGGATPVVGAVQ-p P09012;T131-p AVQGGGATPVVGAVQ 0.80284168800204 0.856395016829733 -0.0376666666666667 0.0183333333333333 1.83713814373675 0.949049268295746 -0.0376666666666667 0.0183333333333333 0.655067699708829 0.803702044610575 -0.472425223530279 0.261023149348457 P09012 SNRPA P09012.T131.p_SNRPA P09012_T131t _1_1_131_131 P09012 P09012 U1 small nuclear ribonucleoprotein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21895.21895.4 22.57 19.1 22.41 2 1 1 0 849.2077 3313.8277 T131t TMT10 123 (K) KAVQGGGAtPVVGAVQGPVPGMPPMTQAPR (I) KAVQGGGAT(0.99)PVVGAVQGPVPGMPPMT(0.0)QAPR K:TMT10,t:Phosphorylated T SNRPA 31279 4 2 3475.1 50.13 HUMAN 1 -1.8371 0.949 AVQGPLGSPPKRGPL-p Q15149;S125-p AVQGPLGSPPKRGPL 0.610770564629011 0.021975877984731 0.0726666666666667 -0.332 3.96612207780835 22.6588126733084 0.0726666666666667 -0.332 0.401224821229952 0.00542149089406489 0.910648264981536 -4.46932130603493 Q15149 PLEC Q15149.S125.p_PLEC Q15149_S125s _1_1_125_125 Q15149 Q15149 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11226.11226.5 18.22 18.22 3.988 3 1 1 0 694.9817 3390.9123 S125s TMT10 112 (R) RTPHVQAVQGPLGsPPKRGPLPTEEQR (V) RT(0.0)PHVQAVQGPLGS(0.99)PPKRGPLPT(0.0)EEQR K:TMT10,s:Phosphorylated S PLEC 533778 6 1 44.1 794.85 HUMAN 1 3.9661 -22.6588 AVQNHVKSLNWGHRV-p Q9NNW7;S138-p AVQNHVKSLNWGHRV 0.34756852367092 0.328137084282773 0.168 -0.145333333333333 8.52843444748425 6.40843005589422 0.168 -0.145333333333333 0.140331948451187 0.228642518067542 1.72673008970927 -1.35666688065638 Q9NNW7 TXNRD2 Q9NNW7.S138.p_TXNRD2 Q9NNW7_S138s_1_1_138_138 Q9NNW7 Q9NNW7|A0A182DWF3|D3YTF8|Q9NNW7-2|A0A182DWF2|A0A096LPK7|Q9NNW7-3|E7EWK1|A0A096LPD9 Thioredoxin reductase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8384.8384.2 7.92 0.79 99 1 1 1 0 590.2837 1098.6006 S138s N140n TMT10 138 (K) sLnWGHR (V) S(1.0)LN(1.0)WGHR s:Phosphorylated S,n:Deamidated TXNRD2 57176.6 1 1 7065.1 7.92 HUMAN 1 8.5284 -6.4084 AVQQSMLS_______-p O14907;S124-p AVQQSMLS_______ 0.293521081094966 0.10543688020082 0.148 -0.196 10.0455837813501 12.9078395256053 0.148 -0.196 0.0989558837812673 0.0511936444006393 1.98963104998383 -2.49311699147799 O14907 TAX1BP3 O14907.S124.p_TAX1BP3 O14907_S124s _1_1_124_124 O14907 O14907|A0A087X282 Tax1-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13247.13247.2 10.39 10.39 6.753 2 1 1 0 586.7829 1092.5921 S124s TMT10 117 (K) AVQQSMLs (-) AVQQS(0.0)MLS(0.99) s:Phosphorylated S TAX1BP3 13734.5 1 4 2411.1 84.6 HUMAN 1 10.0456 -12.9078 AVQSPRRSPRISFFL-p B5MBX0;S79-p AVQSPRRSPRISFFL 0.570892589382331 0.0710033170451477 0.129 -0.251 4.48115298695619 15.2729099763372 0.129 -0.251 0.356356513537132 0.0296967554331739 1.00805559067716 -2.92784078432215 B5MBX0 NotFound B5MBX0.S79.p_NotFound B5MBX0_S75sS79s_2_2_75_79 B5MBX0 B5MBX0|Q96FF9 Sororin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12876.12876.4 13.06 13.06 99 2 2 2 0 615.3244 2298.3356 S75s S79s TMT10 63 (R) IVAHAVEVPAVQsPRRsPR (I) IVAHAVEVPAVQS(1.0)PRRS(1.0)PR s:Phosphorylated S CDCA5 34133.5 5 10 682.1 245.26 HUMAN 1 4.4812 -15.2729 AVRLRGRSFAGNLNT-p Q01813;S386-p AVRLRGRSFAGNLNT 0.173708802316769 0.0698680640987988 -0.290333333333333 -0.266 15.1413026232084 15.3702193753043 -0.290333333333333 -0.266 0.0306104516585864 0.0290387596718425 -2.90499485220728 -2.94619783237756 Q01813 PFKP Q01813.S386.p_PFKP Q01813_S386s _1_1_386_386 Q01813 Q01813|Q01813-2 ATP-dependent 6-phosphofructokinase, platelet type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18618.18618.3 15.89 15.89 10.496 3 1 1 0 551.6201 1572.8786 S386s TMT10 386 (R) sFAGNLNTYK (R) S(0.99)FAGNLNT(0.0)Y(0.0)K K:TMT10,s:Phosphorylated S PFKP 86507.4 23 3 1494.1 136.65 HUMAN 1 -15.1413 -15.3702 AVRSRHLSASTPKAG-p I3L2J0;S664-p AVRSRHLSASTPKAG 0.934031453108508 0.0799587703347656 0.013 -0.305333333333333 0.58363087354169 14.5585385100297 0.013 -0.305333333333333 0.874252559909015 0.0350062950568785 0.165907322859118 -2.79429950468704 I3L2J0 NotFound I3L2J0.S664.p_NotFound I3L2J0_S664s _1_1_664_664 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7356.7356.2 11.03 5.08 2.277 3 1 1 0 689.8783 1298.7833 S664s TMT10 662 (R) HLsASTPK (A) HLS(0.99)AS(0.0)T(0.0)PK K:TMT10,s:Phosphorylated S CIC 259056.7 5 11 23.1 999.57 HUMAN 1 0.5836 -14.5585 AVSAAPGSAAPAAGS-p P05387;S79-p AVSAAPGSAAPAAGS 0.193140245301411 0.670839355679011 -0.289 0.0696666666666667 13.9412691529622 2.36973502250562 -0.289 0.0696666666666666 0.0403527451588875 0.579464050375527 -2.68214172675443 0.589137009963408 P05387 RPLP2 P05387.S79.p_RPLP2 P05387_S79s _1_1_79_79 P05387 P05387 60S acidic ribosomal protein P2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18288.18288.5 26.45 26.45 2.285 4 1 1 0 855.0701 4191.3431 S79s TMT10 62 (K) LASVPAGGAVAVSAAPGsAAPAAGSAPAAAEEKKDEK (K) LAS(0.0)VPAGGAVAVS(0.0)AAPGS(0.99)AAPAAGS(0.0)APAAAEEKKDEK K:TMT10,s:Phosphorylated S RPLP2 11664.7 7 8 1134.1 173.84 HUMAN 1 -13.9413 2.3697 AVSEGCASEDEVEGE-p Q9BYX2;S920-p AVSEGCASEDEVEGE 0.259441883712572 0.0274605623760349 0.161 0.418333333333333 11.1204250406877 21.1740794250328 0.161 0.418333333333333 0.0772604967138221 0.00763118632442903 2.17722032539891 4.1314155142662 Q9BYX2 TBC1D2 Q9BYX2.S920.p_TBC1D2 Q9BYX2_S920s _1_1_920_920 Q9BYX2 Q9BYX2|Q9BYX2-2|Q9BYX2-4|Q9BYX2-5|Q9BYX2-6 TBC1 domain family member 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.10661.10661.2 14.02 14.02 6.234 2 1 1 0 974.3901 1867.8065 S920s TMT10 913 (R) AVSEGCAsEDEVEGEA (-) AVS(0.0)EGCAS(0.99)EDEVEGEA C:Carbamidomethylation,s:Phosphorylated S TBC1D2 106324.8 3 2 4023.1 38.94 HUMAN 1 11.1204 21.1741 AVSFPAPSPVEESAL-p O43379-4;S1330-p AVSFPAPSPVEESAL 0.995222800843425 0.734599254282823 0.000999999999999987 0.0333333333333333 0.0385431135715031 1.84697826994778 0.000999999999999981 0.0333333333333333 0.991164385626936 0.653585145337404 0.0115947890481382 0.474587544269921 O43379 WDR62 O43379.4.S1330.p_WDR62 O43379-4_S1330s _1_1_1330_1330 O43379-4 O43379-4 Isoform 4 of WD repeat-containing protein 62 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.36623.36623.4 25.52 27.13 5.167 8 1 1 0 1103.8149 4332.2635 S1330s TMT10 1299 (R) LTLSSACDGLLQPPVDTQPGVTVPAVSFPAPsPVEESALR (L) LT(0.0)LS(0.0)S(0.0)ACDGLLQPPVDT(0.0)QPGVT(0.0)VPAVS(0.0)FPAPS(0.99)PVEES(0.0)ALR C:Carbamidomethylation,s:Phosphorylated S WDR62 168676.3 5 12 671.1 248.72 HUMAN 1 0.0385 1.847 AVSKVQKSPPEPEII-p Q9Y2H2;S1103-p AVSKVQKSPPEPEII 0.408673456673804 0.125682144347462 0.12 -0.181 7.17219903673866 11.8790035796548 0.12 -0.181 0.191769747457993 0.0648783269585049 1.4911233592506 -2.30975261384833 Q9Y2H2 INPP5F Q9Y2H2.S1103.p_INPP5F Q9Y2H2_S1103s _1_1_1103_1103 Q9Y2H2 Q9Y2H2|Q9Y2H2-4 Phosphatidylinositide phosphatase SAC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21926.21926.4 15.55 15.55 99 1 1 1 0 772.179 3005.7238 S1103s TMT10 1100 (K) VQKsPPEPEIINQVQQNELK (K) VQKS(1.0)PPEPEIINQVQQNELK K:TMT10,s:Phosphorylated S INPP5F 129431.7 3 7 928.1 199.49 HUMAN 1 7.1722 -11.879 AVSLTVPSPLKSDGH-p Q9UKL3;S1448-p AVSLTVPSPLKSDGH 0.0977888731266871 0.0207272841410766 -0.404666666666667 -0.407333333333333 21.3667803506555 23.0316804471096 -0.404666666666667 -0.407333333333333 0.00729998495294926 0.00497544529217735 -4.17861068892753 -4.55680797068749 Q9UKL3 CASP8AP2 Q9UKL3.S1448.p_CASP8AP2 Q9UKL3_S1448s _1_1_1448_1448 Q9UKL3 Q9UKL3|A0A087WTW5 CASP8-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36604.36604.4 21.8 18.88 2.679 6 1 1 0 830.9728 3240.9096 S1448s TMT10 1428 (K) SKPCVSSILLEDLAVSLTVPsPLK (S) S(0.0)KPCVS(0.0)S(0.0)ILLEDLAVS(0.0)LT(0.0)VPS(0.99)PLK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CASP8AP2 224993 2 12 740.1 234.21 HUMAN 1 -21.3668 -23.0317 AVSQLPLSPKETVES-p Q9Y2F5;S1903-p AVSQLPLSPKETVES 0.798363861160931 0.0269382170451549 -0.0403333333333334 -0.439666666666667 1.88433690339598 21.3062555237395 -0.0403333333333334 -0.439666666666667 0.647987024730867 0.00740243235878138 -0.483032481741867 -4.1608427655342 Q9Y2F5 ICE1 Q9Y2F5.S1903.p_ICE1 Q9Y2F5_S1903s _1_1_1903_1903 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19815.19815.4 22.01 18.66 1.738 8 1 1 0 877.7064 3427.8346 S1903s TMT10 1888 (R) SCSSPAVSAVSQLPLsPKETVESHDK (A) S(0.0)CS(0.0)S(0.0)PAVS(0.0)AVS(0.0)QLPLS(0.99)PKET(0.0)VES(0.0)HDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ICE1 250910.2 5 20 216.1 433.09 HUMAN 1 -1.8843 -21.3063 AVSTLIDSLKKTQPE-p A0A286YFF8;S1656-p AVSTLIDSLKKTQPE 0.566691167495734 0.0533323245684845 -0.113 -0.235666666666667 4.54325688901004 16.9772090167033 -0.113 -0.235666666666667 0.351296894902059 0.0200576061061798 -1.01965017079324 -3.25567064007579 A0A286YFF8 NotFound A0A286YFF8.S1656.p_NotFound A0A286YFF8_T1641tS1651sS1656s_3_3_1641_1656 A0A286YFF8 A0A286YFF8|Q7Z3U7 Protein MON2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17596.17596.4 7.9 7.9 7.901 4 3 3 0 917.4837 3427.0162 T1641t S1651s S1656s Hydrogen 1633 (K) CPLPRQQVtEIIFVLKAVsTLIDsLK (K) CPLPRQQVT(0.99)EIIFVLKAVS(0.99)T(0.0)LIDS(0.99)LK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S MON2 192594.7 1 6 1105.1 176.81 HUMAN 1 -4.5433 -16.9772 AVSTVPVSGPSHLRG-p O95865;S167-p AVSTVPVSGPSHLRG 0.363313283648533 0.0196409770321092 -0.152333333333333 0.409666666666667 8.16488365017941 23.4304493615921 -0.152333333333333 0.409666666666667 0.152584927258016 0.00453894650044957 -1.66375200324393 4.65159261182288 O95865 DDAH2 O95865.S167.p_DDAH2 O95865_S167s _1_1_167_167 O95865 O95865 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29152.29152.4 16.39 15.23 1.151 5 1 1 0 760.1389 2957.5682 S167s TMT10 148 (R) GAEIVADTFRDFAVSTVPVsGPSHLR (G) GAEIVADT(0.0)FRDFAVS(0.0)T(0.0)VPVS(0.99)GPS(0.0)HLR s:Phosphorylated S DDAH2 29928.6 1 1 3829.1 42.18 HUMAN 1 -8.1649 23.4304 AVTKSAESPQDAADL-p Q96CW5;S515-p AVTKSAESPQDAADL 0.301590454921122 0.160964252147063 -0.266 0.276 9.76524689980655 10.4322234666503 -0.266 0.276 0.105554149315145 0.0905269009744648 -1.9409531703105 2.05604053233913 Q96CW5 TUBGCP3 Q96CW5.S515.p_TUBGCP3 Q96CW5_S515s _1_1_515_515 Q96CW5 Q96CW5|Q96CW5-2 Gamma-tubulin complex component 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36974.36974.4 18.05 18.05 2.209 3 1 1 0 723.8474 2812.4041 S515s TMT10 512 (K) SAEsPQDAADLFTDLENAFQGK (I) S(0.0)AES(0.99)PQDAADLFT(0.0)DLENAFQGK K:TMT10,s:Phosphorylated S TUBGCP3 104368.1 2 3 3769.1 43.54 HUMAN 1 -9.7652 10.4322 AVTNHSVYCSTKGAL-p Q7Z4W1;Y149-p AVTNHSVYCSTKGAL 0.365498843349433 0.110683773668059 0.358666666666667 0.318 8.11329755016409 12.6209127199466 0.358666666666667 0.318 0.15440815901854 0.0546901013259337 1.65480917312105 2.44168330634741 Q7Z4W1 DCXR Q7Z4W1.Y149.p_DCXR Q7Z4W1_Y149y _1_1_149_149 Q7Z4W1 Q7Z4W1 L-xylulose reductase GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8043.8078.3 16.94 16.94 5.252 5 1 1 0 635.6486 1824.9678 Y149y TMT10 142 (R) AVTNHSVyCSTK (G) AVT(0.0)NHS(0.0)VY(0.99)CS(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y DCXR 26197.9 2 1 211.1 16.94 HUMAN 1 8.1133 12.6209 AVTSVAGSPARCSRI-p Q9Y4B5;S196-p AVTSVAGSPARCSRI 0.910128808420206 0.119009352975 -0.0426666666666667 0.244333333333333 0.801596505130999 12.1904402956795 -0.0426666666666666 0.244333333333333 0.831458063538594 0.0603887403064703 -0.223342770226956 2.36495749568874 Q9Y4B5 MTCL1 Q9Y4B5.S196.p_MTCL1 Q9Y4B5_S196s _1_1_196_196 Q9Y4B5 Q9Y4B5 Microtubule cross-linking factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28453.28459.3 21.13 21.13 1.118 4 1 1 0 640.3573 1839.0901 S196s TMT10 183 (R) IPAVTLAVTSVAGsPAR (C) IPAVT(0.0)LAVT(0.0)S(0.0)VAGS(0.99)PAR s:Phosphorylated S MTCL1 210777.5 1 3 1389.1 147.22 HUMAN 1 -0.8016 12.1904 AVTYVPLTAGMYTLT-p O75369-8;T1198-p AVTYVPLTAGMYTLT 0.44837256771364 0.048037171009988 0.106 0.242 6.43040307749319 17.6286871023681 0.108155708391638 0.242 0.227488628417627 0.0172635970175294 1.36089161315583 3.38480541973692 O75369 FLNB O75369.8.T1198.p_FLNB O75369-8_T1198t _1_1_1198_1198 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33944.33944.3 11 11 2.476 8 1 1 0 945.4765 2754.4498 T1198t TMT10 1187 (K) DGTYAVTYVPLtAGMYTLTMK (Y) DGT(0.0)Y(0.0)AVT(0.0)Y(0.0)VPLT(0.99)AGMY(0.0)T(0.0)LT(0.0)MK K:TMT10,t:Phosphorylated T FLNB 283797.6 1 20 67.1 680.07 HUMAN 1 6.4304 17.6287 AVVGAVKSLQALGEV-p K7ER00;S83-p AVVGAVKSLQALGEV 0.116071900024829 0.254431397695122 -0.431666666666667 0.170666666666667 19.4686795618532 7.82960068309527 -0.431666666666667 0.170666666666667 0.0113013947244244 0.164831394062173 -3.76583970741543 1.60508894316934 K7ER00 NotFound K7ER00.S83.p_NotFound K7ER00_S83s _1_1_83_83 K7ER00 K7ER00|Q9Y285|Q9Y285-2|K7ER16 Phenylalanine--tRNA ligase alpha subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.36721.36721.3 24.52 24.52 99 1 1 1 0 612.9937 1757.0006 S83s TMT10 83 (K) sLQALGEVIEAELR (S) S(1.0)LQALGEVIEAELR s:Phosphorylated S FARSA 62451.2 1 1 2453.1 82.83 HUMAN 1 -19.4687 7.8296 AVVKIPGTPGAGGRL-p Q16514;T43-p AVVKIPGTPGAGGRL 0.594325223752487 0.325233852070488 -0.092 0.137333333333333 4.16686298844266 6.4548554128052 -0.092 0.137333333333333 0.383101366559162 0.226211384978737 -0.94889422235899 1.364860739547 Q16514 TAF12 Q16514.T43.p_TAF12 Q16514_T43t _1_1_43_43 Q16514 Q16514|Q16514-2 Transcription initiation factor TFIID subunit 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16723.16723.5 13.82 13.82 1.161 3 1 1 0 601.1415 2921.714 T43t TMT10 40 (K) IPGtPGAGGRLSPENNQVLTKK (K) IPGT(0.99)PGAGGRLS(0.0)PENNQVLT(0.0)KK K:TMT10,t:Phosphorylated T TAF12 18038.3 3 2 2572.1 78.13 HUMAN 1 -4.1669 6.4549 AVVKRSQSFSKERTE-p Q53SF7;S1074-p AVVKRSQSFSKERTE 0.43497101841619 0.0921780987969645 -0.151333333333333 -0.297333333333333 6.65908665254221 13.6953475333666 -0.151333333333333 -0.297333333333333 0.215819824352076 0.0427036745519085 -1.40119599575569 -2.63561260863364 Q53SF7 COBLL1 Q53SF7.S1074.p_COBLL1 Q53SF7_S1074s _1_1_1074_1074 Q53SF7 A0A0D9SG04|Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6127.6127.3 8.47 3.62 2.494 3 1 1 0 459.9151 1297.7629 S1074s TMT10 1071 (K) RSQsFSK (E) RS(0.0)QS(0.99)FS(0.0)K K:TMT10,s:Phosphorylated S COBLL1 132526.1 1 22 163.1 494.83 HUMAN 1 -6.6591 -13.6953 AVVRCTLSANLVASG-p O75643;S241-p AVVRCTLSANLVASG 0.481533495886899 0.0714174561782472 -0.146333333333333 0.287333333333333 5.84058896939171 15.2377632724561 -0.146333333333333 0.287333333333333 0.260580013989152 0.0299380612626754 -1.25611329859332 2.92122057130314 O75643 SNRNP200 O75643.S241.p_SNRNP200 O75643_S241s _1_1_241_241 O75643 O75643|O75643-2 U5 small nuclear ribonucleoprotein 200 kDa helicase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26699.26699.3 18.1 17.14 1.108 5 1 1 0 769.3918 2226.1874 S241s TMT10 238 (R) CTLsANLVASGELMSSK (K) CT(0.0)LS(0.99)ANLVAS(0.0)GELMS(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SNRNP200 246157.8 1 2 2427.1 83.94 HUMAN 1 -5.8406 15.2378 AVVSKHQSPKITTSL-p Q13596-3;S58-p AVVSKHQSPKITTSL 0.792201427481184 0.599103534122506 0.0766666666666667 -0.177666666666667 1.95161119037531 3.01509504376486 0.0766666666666667 -0.177666666666667 0.63802674055003 0.499448249845689 0.498059124560257 -0.723374785666022 Q13596 SNX1 Q13596.3.S58.p_SNX1 Q13596-3_S58s _1_1_58_58 Q13596-3 Q13596-3|Q13596-2|H0YKD5|J3KPH4 Isoform 3 of Sorting nexin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18225.18225.3 16.36 12.39 2.529 5 1 1 0 901.5106 2622.5546 S58s TMT10 56 (K) HQsPKITTSLLPINNGSK (E) HQS(0.99)PKIT(0.0)T(0.0)S(0.0)LLPINNGS(0.0)K K:TMT10,s:Phosphorylated S SNX1 63252.3 3 6 1560.1 131.56 HUMAN 1 1.9516 -3.0151 AWAFVRKSASPEVSE-p O60930;S74-p AWAFVRKSASPEVSE 0.581059694963249 0.00232985334139993 -0.121 1.067 4.33725752201394 40.4893879679885 -0.121 1.067 0.368361512733272 8.93431382196406e-05 -0.981072290520786 10.3536904419643 O60930 RNASEH1 O60930.S74.p_RNASEH1 O60930_S74sS76s_2_2_74_76 O60930 O60930 Ribonuclease H1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5036.5036.4 12.34 12.34 3.651 4 2 2 0 714.5646 2695.296 S74s S76s TMT10 74 (K) sAsPEVSEGHENQHGQESEAK (A) S(0.99)AS(0.99)PEVS(0.0)EGHENQHGQES(0.0)EAK K:TMT10,s:Phosphorylated S RNASEH1 32348.9 2 2 4554.1 29.9 HUMAN 1 -4.3373 40.4894 AWASGQLSTDITTSE-p Q52LW3;S21-p AWASGQLSTDITTSE 0.936107507392066 0.0263080103568939 -0.0153333333333333 -0.347666666666667 0.559589390761378 21.4741308335937 -0.0153333333333333 -0.347666666666667 0.879105629061056 0.00712175315492379 -0.159438526439702 -4.19839775485046 Q52LW3 ARHGAP29 Q52LW3.S21.p_ARHGAP29 Q52LW3_S21s _1_1_21_21 Q52LW3 Q52LW3|F8VWZ8|Q52LW3-2 Rho GTPase-activating protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27030.27030.3 17.04 16.62 1.16 6 1 1 0 845.4247 2454.295 S21s TMT10 14 (R) AWASGQLsTDITTSEMGLK (S) AWAS(0.0)GQLS(0.99)T(0.0)DIT(0.0)T(0.0)S(0.0)EMGLK K:TMT10,s:Phosphorylated S ARHGAP29 143601.5 2 1 517.1 284.75 HUMAN 1 -0.5596 -21.4741 AWATKGPSYEDLYTQ-p P29083;S245-p AWATKGPSYEDLYTQ 1 0.448707636571572 -1.38777878078145e-17 -0.111 9.64327466553287e-16 4.64001622024286 -1.60246890531964e-17 -0.111 1 0.343556664765233 -2.07987000299986e-16 -1.03745881640154 P29083 GTF2E1 P29083.S245.p_GTF2E1 P29083_S245s _1_1_245_245 P29083 P29083 General transcription factor IIE subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24378.24378.4 21.83 21.83 2.746 5 1 1 0 1019.7242 3995.9486 S245s TMT10 237 (R) EAWATKGPsYEDLYTQNVVINMDDQEDLHR (A) EAWAT(0.0)KGPS(0.99)Y(0.0)EDLY(0.0)T(0.0)QNVVINMDDQEDLHR K:TMT10,s:Phosphorylated S GTF2E1 49793.6 1 1 3947.1 40.38 HUMAN 1 0 -4.64 AWEEENLSKYKDSET-p Q96HD1-2;S81-p AWEEENLSKYKDSET 0.262209486767428 0.0727841803049565 0.213666666666667 0.303666666666667 11.0252293609252 15.1197543280075 0.213666666666667 0.303666666666667 0.0789727140988117 0.0307627082851251 2.16052990564658 2.89903122524881 Q96HD1 CRELD1 Q96HD1.2.S81.p_CRELD1 Q96HD1-2_S81s _1_1_81_81 Q96HD1-2 Q96HD1-2|F8WBY3 Isoform 2 of Cysteine-rich with EGF-like domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19257.19257.3 9.13 9.13 9.133 2 1 1 0 802.709 2326.1352 S81s TMT10 66 (R) DNFGGGNTAWEEENLsK (Y) DNFGGGNT(0.0)AWEEENLS(0.99)K K:TMT10,s:Phosphorylated S CRELD1 48109.1 1 1 6843.1 9.13 HUMAN 1 11.0252 15.1198 AWEIPRESLRLEVKL-p P12931-2;S275-p AWEIPRESLRLEVKL 0.037433821034406 0.00936504122601923 -0.709666666666667 -0.447 32.5638103764229 28.6317713748281 -0.709666666666667 -0.447 0.000554139313519224 0.00137032273297614 -7.2517174316549 -6.01742958975184 P12931 SRC P12931.2.S275.p_SRC P12931-2_S275s _1_1_275_275 P12931-2 J3QRU1|P07947|P12931-2 Isoform 2 of Proto-oncogene tyrosine-protein kinase Src HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22480.22480.4 13.29 13.29 99 1 1 1 0 595.5768 2299.3174 S275s TMT10 267 (K) DAWEIPREsLRLEVK (L) DAWEIPRES(1.0)LRLEVK K:TMT10,s:Phosphorylated S SRC 61101 1 12 1289.2 157.77 HUMAN 1 -32.5638 -28.6318 AWEVKKMSPGRHVIP-p Q9BY12;S177-p AWEVKKMSPGRHVIP 0.937360896291342 0.017262160306161 0.0126666666666667 -0.619 0.546401488338708 24.3208638376921 0.0126666666666667 -0.619 0.881779201999766 0.00369754626059389 0.15587822206907 -4.8679416770161 Q9BY12 SCAPER Q9BY12.S177.p_SCAPER Q9BY12_S177s _1_1_177_177 Q9BY12 Q9BY12|Q9BY12-2 S phase cyclin A-associated protein in the endoplasmic reticulum HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10116.10116.5 17.87 9.28 13.998 6 1 1 0 632.5399 3078.6995 S177s TMT10 175 (K) KMsPGRHVIPSPSTDRINVTSNAR (R) KMS(0.99)PGRHVIPS(0.0)PS(0.0)T(0.0)DRINVT(0.0)S(0.0)NAR K:TMT10,s:Phosphorylated S SCAPER 159939.1 1 2 3706.1 44.82 HUMAN 1 0.5464 -24.3209 AWINEPLSDSESEDE-p O14617-5;S632-p AWINEPLSDSESEDE 0.970811478408808 0.31585031847978 0.00966666666666665 0.143333333333333 0.253421357565846 6.61224784282645 0.00966666666666667 0.143333333333333 0.943317441126026 0.2181600456036 0.0744627669824915 1.39258989231589 O14617 AP3D1 O14617.5.S632.p_AP3D1 O14617-5_S632s_1_1_632_632 O14617-5 O14617-5|O14617-2|O14617-4|O14617-3 Isoform 5 of AP-3 complex subunit delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29300.29300.5 19.11 19.11 1.166 3 1 1 0 767.1829 3750.9227 N628n S632s TMT10 614 (K) KVPVPEGLDLDAWInEPLsDSESEDERPR (A) KVPVPEGLDLDAWIN(1.0)EPLS(0.99)DS(0.0)ES(0.0)EDERPR K:TMT10,n:Deamidated,s:Phosphorylated S AP3D1 137789.5 1 3 513.1 286.98 HUMAN 1 0.2534 6.6122 AWQEECPSDSEEDEG-p P09958;S773-p AWQEECPSDSEEDEG 0.228095422318106 0.05155187738701 0.224 0.283333333333333 12.3336317135908 17.1868494049616 0.224 0.283333333333333 0.0584301267813478 0.0191123926680782 2.39165520469005 3.29698059651734 P09958 FURIN P09958.S773.p_FURIN P09958_S773sS775s_2_2_773_775 P09958 P09958 Furin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17570.17570.3 12.04 12.04 99 2 2 2 0 1050.0846 2988.3115 S773s S775s TMT10 761 (K) GLPPEAWQEECPsDsEEDEGRGER (T) GLPPEAWQEECPS(1.0)DS(1.0)EEDEGRGER C:Carbamidomethylation,s:Phosphorylated S FURIN 87931.6 1 1 6368.1 12.04 HUMAN 1 12.3336 17.1868 AYDCHRYSRRRRSRS-p Q16629;S123-p AYDCHRYSRRRRSRS 0.93527869194269 0.155270411750039 -0.015 0.216666666666667 0.568371641792654 10.6380802874142 -0.015 0.216666666666667 0.877329708408125 0.0863360094632432 -0.161804773150304 2.09191082618766 Q16629 SRSF7 Q16629.S123.p_SRSF7 Q16629_S123s _1_1_123_123 Q16629 Q16629|C9JAB2|Q16629-4|A0A0B4J1Z1|Q16629-2|Q16629-3|F8WEA1 Serine/arginine-rich splicing factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3674.3674.3 15.77 12.76 4.089 4 1 1 0 631.94 1813.839 S123s TMT10 113 (K) GHYAYDCHRYsR (R) GHY(0.0)AY(0.0)DCHRY(0.0)S(0.99)R C:Carbamidomethylation,s:Phosphorylated S SRSF7 27594.3 2 1 2858.1 67.97 HUMAN 1 -0.5684 10.6381 AYERSMMSPMADRSM-p P18583-5;S1076-p AYERSMMSPMADRSM 0.324195658268258 0.583228253300376 0.182666666666667 -0.0543333333333333 9.16133790911772 3.16131370825991 0.182666666666667 -0.0543333333333333 0.121301510545031 0.482912702470527 1.83629493592015 -0.752881762554471 P18583 SON P18583.5.S1076.p_SON P18583-5_S1076s _1_1_1076_1076 P18583-5 P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-2|P18583-6 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12782.12782.2 14.45 8.58 4.418 2 1 1 0 667.7784 1254.5842 S1076s TMT10 1073 (R) SMMsPMADR (S) S(0.0)MMS(0.99)PMADR s:Phosphorylated S SON 267429.6 3 15 45.1 778.56 HUMAN 1 9.1613 -3.1613 AYGASAPSVTSAALR-p O43488;S290-p AYGASAPSVTSAALR 0.768288876315315 0.663746177847037 0.0433333333333333 -0.068 2.19401419318619 2.43715497673757 0.0433333333333333 -0.068 0.603390656273937 0.570537904026748 0.551351723671842 -0.603499330073341 O43488 AKR7A2 O43488.S290.p_AKR7A2 O43488_S290s _1_1_290_290 O43488 O43488 Aflatoxin B1 aldehyde reductase member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20110.20110.3 14.83 14.83 1.157 5 1 1 0 705.3679 2034.1181 S290s TMT10 279 (K) ALQAAYGASAPsVTSAALR (W) ALQAAY(0.0)GAS(0.0)APS(0.99)VT(0.0)S(0.0)AALR s:Phosphorylated S AKR7A2 40044.7 1 4 3668.1 45.68 HUMAN 1 2.194 -2.4372 AYGIGQDSPTGKSNI-p Q0VDF9;S186-p AYGIGQDSPTGKSNI 0.259441883712572 0.0844865120953694 -0.258333333333333 0.275333333333333 11.1197970192195 14.207659024304 -0.258333333333333 0.275333333333333 0.0772716699524972 0.0379519502083906 -2.17711015962501 2.72945844860912 Q0VDF9 HSPA14 Q0VDF9.S186.p_HSPA14 Q0VDF9_S186s _1_1_186_186 Q0VDF9 Q0VDF9 Heat shock 70 kDa protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26030.26030.3 24.08 17.34 1.566 4 1 1 0 926.1537 2696.5023 S186s TMT10 169 (R) LIHEPSAALLAYGIGQDsPTGK (S) LIHEPS(0.0)AALLAY(0.0)GIGQDS(0.99)PT(0.0)GK K:TMT10,s:Phosphorylated S HSPA14 55478.1 1 1 4025.1 38.91 HUMAN 1 -11.1198 14.2077 AYGSVKAYTNFDAER-p P07355-2;Y48-p AYGSVKAYTNFDAER 0.495655730023748 0.0213030336773621 -0.0926666666666667 0.332 5.61366475176487 22.8603015283091 -0.0926666666666667 0.332 0.274557634740186 0.00517570896035791 -1.21542182026538 4.51646155466965 P07355 ANXA2 P07355.2.Y48.p_ANXA2 P07355-2_Y48y _1_1_48_48 P07355-2 P07355-2|A6NMY6|H0YMU9|H0YLV6|H0YKN4 Isoform 2 of Annexin A2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.30044.30143.3 24.94 19.82 1.351 3 1 1 0 898.4606 2613.3925 Y48y TMT10 47 (K) AyTNFDAERDALNIETAIK (T) AY(0.99)T(0.0)NFDAERDALNIET(0.0)AIK K:TMT10,y:Phosphorylated Y ANXA2 40695.7 6 2 8.1 109.57 HUMAN 1 -5.6137 22.8603 AYHDLPMS_______-p Q9Y315;S318-p AYHDLPMS_______ 0.963118175966314 0.505106253543266 0.00966666666666666 -0.063 0.313449198705126 3.97503569625662 0.00966666666666666 -0.063 0.930368676325069 0.400402177264644 0.091524378692408 -0.912200852543135 Q9Y315 DERA Q9Y315.S318.p_DERA Q9Y315_S318s _1_1_318_318 Q9Y315 Q9Y315|E9PPM8|G3V158 Deoxyribose-phosphate aldolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16422.16422.2 15.65 15.65 15.653 3 1 1 0 738.8259 1396.6769 S318s TMT10 309 (R) YAAYHDLPMs (-) Y(0.0)AAY(0.0)HDLPMS(0.99) s:Phosphorylated S DERA 35515.4 1 4 3029.1 62.74 HUMAN 1 0.3134 -3.975 AYHSRSKSPLPPEEE-p Q1KMD3;S228-p AYHSRSKSPLPPEEE 0.222944547401694 0.00917359434218356 0.202333333333333 0.425333333333333 12.5364633216485 28.7974811405671 0.202333333333333 0.425333333333333 0.0557639678109014 0.00131902153448933 2.42786587101607 6.06532545875037 Q1KMD3 HNRNPUL2 Q1KMD3.S228.p_HNRNPUL2 Q1KMD3_S228s _1_1_228_228 Q1KMD3 Q1KMD3|H3BQZ7 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.29029.29029.5 30.44 30.44 11.833 7 1 1 0 935.0688 4591.3182 S228s TMT10 228 (K) sPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK (D) S(0.99)PLPPEEEAKDEEEDQT(0.0)LVNLDT(0.0)Y(0.0)T(0.0)S(0.0)DLHFQVS(0.0)K K:TMT10,s:Phosphorylated S HNRNPUL2 85673.7 46 6 294.1 379.87 HUMAN 1 12.5365 28.7975 AYKMAWLSQRQLARS-p Q6ZN28;S184-p AYKMAWLSQRQLARS 0.574624647827699 0.0366680906496927 -0.0806666666666667 -0.342333333333333 4.42745454518395 19.3165203713827 -0.0806666666666667 -0.342333333333333 0.360790044665477 0.011704367858968 -0.998005729477979 -3.7304398622824 Q6ZN28 MACC1 Q6ZN28.S184.p_MACC1 Q6ZN28_S184s _1_1_184_184 Q6ZN28 Q6ZN28 Metastasis-associated in colon cancer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18956.18956.2 10.43 3.76 99 1 1 1 0 600.7943 1120.6135 S184s TMT10 180 (K) MAWLsQR (Q) MAWLS(1.0)QR s:Phosphorylated S MACC1 97436.1 2 5 744.1 233.51 HUMAN 1 -4.4275 -19.3165 AYKVGNESPVQELKQ-p Q5JSH3;S50-p AYKVGNESPVQELKQ 0.328161595452665 0.320794419628764 -0.215333333333333 0.105 9.04877746285171 6.52833895425795 -0.215333333333333 0.105 0.124486499142711 0.222416040243672 -1.8168069560868 1.3778163292097 Q5JSH3 WDR44 Q5JSH3.S50.p_WDR44 Q5JSH3_S50s _1_1_50_50 Q5JSH3 Q5JSH3|Q5JSH3-2 WD repeat-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22535.22535.5 18.99 17.8 12.278 6 1 1 0 773.822 3785.1143 S50s TMT10 31 (K) VGLSTFKETENTAYKVGNEsPVQELK (Q) VGLS(0.0)T(0.0)FKET(0.0)ENT(0.0)AY(0.0)KVGNES(0.99)PVQELK K:TMT10,s:Phosphorylated S WDR44 101935 13 3 95.1 607.92 HUMAN 1 -9.0488 6.5283 AYLPVNESFGFTADL-p P13639;S793-p AYLPVNESFGFTADL 0.627993569436905 0.812612092009076 0.082 0.0503333333333334 3.75255431619387 1.26331431762681 0.082 0.0503333333333334 0.421448554271694 0.747598752890145 0.869524422566141 0.338648864924043 P13639 EEF2 P13639.S793.p_EEF2 P13639_S793s_1_1_793_793 P13639 P13639 Elongation factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.31037.31037.3 11.87 11.87 4.584 3 1 1 0 704.0148 2029.0592 N791n S793s TMT10 786 (K) AYLPVnEsFGFTADLR (S) AY(0.0)LPVN(1.0)ES(0.99)FGFT(0.0)ADLR n:Deamidated,s:Phosphorylated S EEF2 96306.4 1 10 693.1 242.75 HUMAN 1 3.7526 1.2633 AYLWKPPSRSSSMSS-p Q9BQS8-4;S196-p AYLWKPPSRSSSMSS 0.814089108611631 0.618269168646653 0.0413333333333333 0.05 1.71779088052167 2.83776956172396 0.0413333333333333 0.0525084606739056 0.673319065428601 0.520263123310805 0.445356352192776 0.687170849026045 Q9BQS8 FYCO1 Q9BQS8.4.S196.p_FYCO1 Q9BQS8-4_S196s _1_1_196_196 Q9BQS8-4 Q9BQS8-4|Q9BQS8-2|Q9BQS8-3 Isoform 4 of FYVE and coiled-coil domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20941.20941.4 17.21 17.21 2.234 7 1 1 0 576.5604 2223.2538 S196s TMT10 182 (R) TLTTGSSAYLWKPPsR (S) T(0.0)LT(0.0)T(0.0)GS(0.0)S(0.0)AY(0.0)LWKPPS(0.99)R K:TMT10,s:Phosphorylated S FYCO1 170710.6 3 1 4678.1 28.1 HUMAN 1 1.7178 2.8378 AYPERKGSPTPGFST-p Q6ZRV2;S881-p AYPERKGSPTPGFST 0.55827821703547 0.833493897125893 0.0986666666666667 -0.0283333333333333 4.67343365947904 1.10788986558752 0.0986666666666667 -0.0283333333333333 0.340923261115427 0.774838181946739 1.04385822124607 -0.300696664918551 Q6ZRV2 FAM83H Q6ZRV2.S881.p_FAM83H Q6ZRV2_S881s _1_1_881_881 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8932.8932.2 10.1 10.1 1.382 4 1 1 0 836.945 1592.9161 S881s TMT10 879 (R) KGsPTPGFSTR (R) KGS(0.99)PT(0.0)PGFS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S FAM83H 127633.5 26 19 7.1 1347.23 HUMAN 1 4.6734 -1.1079 AYPERRGSPVPPVPE-p Q6ZRV2;S914-p AYPERRGSPVPPVPE 0.844605466455093 0.677643930314929 0.029 0.048 1.41789808477786 2.30954856407464 0.029 0.048 0.72145656803815 0.587550423437908 0.375650925203504 0.57624174481224 Q6ZRV2 FAM83H Q6ZRV2.S914.p_FAM83H Q6ZRV2_S914s _1_1_914_914 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4626.4626.3 16.59 16.59 99 1 1 1 0 476.2492 1346.7651 S914s Hydrogen 912 (R) RGsPVPPVPERR (S) RGS(1.0)PVPPVPERR s:Phosphorylated S FAM83H 127633.5 24 22 7.1 1347.23 HUMAN 1 1.4179 2.3095 AYPQQMHTPPVQSSS-p P49792;T923-p AYPQQMHTPPVQSSS 0.391178814803887 0.121002641167321 -0.193666666666667 0.177666666666667 7.52535159335298 12.0916708018652 -0.193666666666667 0.177666666666667 0.176792908506682 0.0617778684856089 -1.55269540312867 2.34742322434791 P49792 RANBP2 P49792.T923.p_RANBP2 P49792_T923t _1_1_923_923 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22725.22725.4 24.9 24.9 2.361 8 1 1 0 1114.0079 4373.0399 T923t Hydrogen 908 (R) LPPQQHIYAYPQQMHtPPVQSSSACMFSQEMYGPPALR (F) LPPQQHIY(0.0)AY(0.0)PQQMHT(0.99)PPVQS(0.0)S(0.0)S(0.0)ACMFS(0.0)QEMY(0.0)GPPALR C:Carbamidomethylation,t:Phosphorylated T RANBP2 362585.9 2 14 9.1 1298.62 HUMAN 1 -7.5254 12.0917 AYQSSTRSPSPYSRR-p Q9NYV4-2;S291-p AYQSSTRSPSPYSRR 0.207422631751664 0.466967920137926 -0.193333333333333 -0.109333333333333 13.1846860641983 4.4093285150568 -0.193333333333333 -0.109333333333333 0.0480320799641315 0.362299010992191 -2.54440023880101 -0.994426782685155 Q9NYV4 CDK12 Q9NYV4.2.S291.p_CDK12 Q9NYV4-2_S291sS293s_2_2_291_293 Q9NYV4-2 Q9NYV4|Q9NYV4-2 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12273.12273.4 10.82 10.82 1.336 12 2 2 0 851.9033 3244.6639 S291s S293s TMT10 273 (R) QSVSPPYKEPSAYQSSTRsPsPYSR (R) QS(0.0)VS(0.0)PPY(0.0)KEPS(0.0)AY(0.0)QS(0.0)S(0.0)T(0.0)RS(0.99)PS(0.99)PY(0.0)S(0.0)R K:TMT10,s:Phosphorylated S CDK12 163853.1 2 37 59.1 708.76 HUMAN 1 -13.1847 -4.4093 AYRARSKSRDRFFQG-p C9J6P4;S249-p AYRARSKSRDRFFQG 0.168729110694674 0.436433240529759 0.238 0.0923333333333334 15.418915700992 4.79745425215629 0.238 0.0923333333333334 0.02871497416634 0.33132528085829 2.95739466251368 1.0665981658242 C9J6P4 ZC3HAV1 C9J6P4.S249.p_ZC3HAV1 C9J6P4_S249sS257s_2_2_249_257 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2|Q7Z2W4-3 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18788.18788.4 12.37 12.37 7.036 5 2 2 0 709.8234 2676.3328 S249s S257s TMT10 249 (K) sRDRFFQGsQEFLASASASAER (S) S(0.99)RDRFFQGS(0.99)QEFLAS(0.0)AS(0.0)AS(0.0)AER s:Phosphorylated S ZC3HAV1 115909.2 9 18 361.1 343.37 HUMAN 1 15.4189 4.7975 AYRGVLNSPVKAVRD-p P53992;S862-p AYRGVLNSPVKAVRD 0.696949484695718 0.047502988351231 -0.0606666666666667 0.236666666666667 2.94525749197357 17.7002160219902 -0.0606666666666667 0.236666666666667 0.507544645957879 0.0169815918239242 -0.709271376830012 3.39912236782058 P53992 SEC24C P53992.S862.p_SEC24C P53992_S862s _1_1_862_862 P53992 P53992|G5EA31|P53992-2 Protein transport protein Sec24C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13611.13611.2 9.8 9.8 99 1 1 1 0 676.3915 1271.8087 S862s TMT10 858 (R) GVLNsPVK (A) GVLNS(1.0)PVK K:TMT10,s:Phosphorylated S SEC24C 119863.1 4 2 2432.1 83.59 HUMAN 1 -2.9453 17.7002 AYRLGPASAADTGSE-p Q9NYB0;S105-p AYRLGPASAADTGSE 0.250041562311692 0.00419480745689152 0.201 0.709333333333333 11.4899333686609 34.9723699740496 0.201 0.709333333333334 0.0709588654696129 0.000318246035786476 2.24217565328018 8.08404734897933 Q9NYB0 TERF2IP Q9NYB0.S105.p_TERF2IP Q9NYB0_S105s _1_1_105_105 Q9NYB0 Q9NYB0 Telomeric repeat-binding factor 2-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16833.16833.3 20.57 20.57 2.529 3 1 1 0 1096.2192 3206.6694 S105s TMT10 101 (R) LGPAsAADTGSEAKPGALAEGAAEPEPQR (H) LGPAS(0.99)AADT(0.0)GS(0.0)EAKPGALAEGAAEPEPQR K:TMT10,s:Phosphorylated S TERF2IP 44430.3 1 3 1047.1 184.33 HUMAN 1 11.4899 34.9724 AYRQRNASRDQVVYG-p A0A0G2JPL6;S109-p AYRQRNASRDQVVYG 0.114688242267433 0.0442119812566844 -0.446666666666667 0.244333333333333 19.5842392780131 18.1402163223075 -0.446666666666667 0.244333333333333 0.0110046458877489 0.0153454054535119 -3.79028630649835 3.48781466507251 A0A0G2JPL6 NotFound A0A0G2JPL6.S109.p_NotFound A0A0G2JPL6_S109s _1_1_109_109 A0A0G2JPL6 Q7Z404|A0A0G2JPL6|A0A0G2JP95|A0A087WT65|Q7Z404-1|A0A0G2JMP8|A0A0G2JMM6|A0A087WVI4 Transmembrane channel-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6232.6232.3 15.5 15.5 10.359 4 1 1 0 597.6266 1710.8972 S109s Hydrogen 107 (R) NAsRDQVVYGSGTK (T) NAS(0.99)RDQVVY(0.0)GS(0.0)GT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S TMC4 80218.1 4 1 4768.1 26.9 HUMAN 1 -19.5842 18.1402 AYRYRSDSQDEVEKG-p Q15390;S290-p AYRYRSDSQDEVEKG 0.0719549135296335 0.295281116775173 -0.389 -0.109 24.6850828827566 6.9928236590964 -0.389 -0.109 0.00340010016834594 0.19985620389748 -4.96445758401517 -1.45935420263228 Q15390 MTFR1 Q15390.S290.p_MTFR1 Q15390_S290s _1_1_290_290 Q15390 Q15390|Q15390-2 Mitochondrial fission regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7475.7475.2 13.99 13.99 2.439 2 1 1 0 787.8727 1494.7688 S290s TMT10 288 (R) SDsQDEVEK (G) S(0.0)DS(0.99)QDEVEK K:TMT10,s:Phosphorylated S MTFR1 37171 7 3 2235.1 92.35 HUMAN 1 -24.6851 -6.9928 AYSFSSDSPLDSSPK-p Q8NCG7;S579-p AYSFSSDSPLDSSPK 0.14685232684758 0.0494506066251788 -0.246666666666667 -0.270333333333333 16.9169933499205 17.4656539267172 -0.246666666666667 -0.270333333333333 0.0203376451259962 0.0179239864665434 -3.24630375295301 -3.3522772919951 Q8NCG7 DAGLB Q8NCG7.S579.p_DAGLB Q8NCG7_S579s _1_1_579_579 Q8NCG7 Q8NCG7|E7ET49|Q8NCG7-4|Q8NCG7-2 Sn1-specific diacylglycerol lipase beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25144.25144.2 17.83 17.83 1.174 8 1 1 0 1248.5907 2416.2073 S579s TMT10 569 (R) WSPAYSFSSDsPLDSSPK (Y) WS(0.0)PAY(0.0)S(0.0)FS(0.0)S(0.0)DS(0.99)PLDS(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S DAGLB 74928.9 5 2 3425.1 51.4 HUMAN 1 -16.917 -17.4657 AYSGESDSEEEQERG-p A0A0A0MR66;S803-p AYSGESDSEEEQERG 0.349030139499991 0.144402317031321 0.1425 0.250666666666667 8.49323441141386 11.0698439533759 0.1425 0.250666666666667 0.14147397590169 0.0781655889810809 1.72063508219082 2.16736564529174 A0A0A0MR66 RBM10 A0A0A0MR66.S803.p_RBM10 A0A0A0MR66_S801sS803s_2_2_801_803 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2|P98175-3|P98175-4 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16902.16902.3 15.36 15.36 2.143 4 2 2 0 782.3198 2185.0094 S801s S803s TMT10 792 (R) GLVAAYSGEsDsEEEQER (G) GLVAAY(0.0)S(0.0)GES(0.99)DS(0.99)EEEQER s:Phosphorylated S RBM10 110706.4 7 19 270.1 394.36 HUMAN 2 8.4932 11.0698 AYTFERESSGEEEE_-p P54368;S222-p AYTFERESSGEEEE_ 0.0856196657739645 0.0173454724453883 0.354 0.344333333333333 22.8445886315808 24.2898403615526 0.354 0.344333333333333 0.00519446873745174 0.00372405394921795 4.51778402247138 4.86029183005579 P54368 OAZ1 P54368.S222.p_OAZ1 P54368_S222sS223s_2_2_222_223 P54368 P54368|J3QQY4 Ornithine decarboxylase antizyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22514.22514.3 7.37 7.37 1.347 4 2 2 0 977.057 2769.197 S222s S223s TMT10 208 (K) RPDACFMAYTFEREssGEEEE (-) RPDACFMAY(0.0)T(0.0)FERES(0.99)S(0.99)GEEEE C:Carbamidomethylation,s:Phosphorylated S OAZ1 25747.4 1 3 5171.1 22.16 HUMAN 1 22.8446 24.2898 AYVETKYSPPAISPL-p Q14694;S365-p AYVETKYSPPAISPL 0.228374634762289 0.547405094196713 0.282 0.157666666666667 12.3256133736216 3.51924801289187 0.282 0.157666666666667 0.0585381054483897 0.444708262674852 2.39022606018557 0.823912946410089 Q14694 USP10 Q14694.S365.p_USP10 Q14694_S365s _1_1_365_365 Q14694 Q14694-2|Q14694-3 Ubiquitin carboxyl-terminal hydrolase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29170.29170.5 25.29 25.29 2.698 13 1 1 0 975.9244 4795.6004 S365s TMT10 341 (K) SWASLFHDSKPSSSSPVAYVETKYsPPAISPLVSEK (Q) S(0.0)WAS(0.0)LFHDS(0.0)KPS(0.0)S(0.0)S(0.0)S(0.0)PVAY(0.0)VET(0.0)KY(0.0)S(0.99)PPAIS(0.0)PLVS(0.0)EK K:TMT10,s:Phosphorylated S USP10 87759.8 1 9 358.1 346.34 HUMAN 1 12.3256 3.5192 AYVGQKSSFTVDCSK-p P21333-2;S2569-p AYVGQKSSFTVDCSK 0.645300291181386 0.757293418847766 0.0663333333333333 0.0386666666666667 3.5596950018472 1.66917398090726 0.0663333333333334 0.0386666666666667 0.440585804064983 0.680898851927414 0.831970083916155 0.434177031946217 P21333 FLNA P21333.2.S2569.p_FLNA P21333-2_S2569s _1_1_2569_2569 P21333-2 P21333|P21333-2|Q60FE5 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13114.13114.2 10.56 10.56 1.461 4 1 1 0 784.8747 1488.7769 S2569s TMT10 2568 (K) SsFTVDCSK (A) S(0.0)S(0.99)FT(0.0)VDCS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FLNA 282751.6 1 22 198.1 454.47 HUMAN 1 3.5597 1.6692 CACSPGGSEDSEAME-p Q6PIJ6;S757-p CACSPGGSEDSEAME 0.346046910908662 0.0275403203261996 0.131666666666667 0.467333333333333 8.56363219996804 21.1560033785509 0.131666666666667 0.467333333333333 0.139199213039033 0.00766301476137044 1.73282430056276 4.12740075063918 Q6PIJ6 FBXO38 Q6PIJ6.S757.p_FBXO38 Q6PIJ6_S757sS760s_2_2_757_760 Q6PIJ6 Q6PIJ6|Q6PIJ6-2 F-box only protein 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12739.12739.3 21.71 21.71 4.716 5 2 2 0 1097.7326 3131.2496 S757s S760s TMT10 749 (R) QCACSPGGsEDsEAMEEGDAESSVCPR (C) QCACS(0.0)PGGS(0.99)EDS(0.99)EAMEEGDAES(0.0)S(0.0)VCPR C:Carbamidomethylation,s:Phosphorylated S FBXO38 135824.2 3 7 2435.1 83.55 HUMAN 1 8.5636 21.156 CADEKAESDGEEKEE-p O75691;S2601-p CADEKAESDGEEKEE 0.0983003293533947 0.715698318721438 -0.666666666666667 0.189 21.3248015575101 1.99792770421488 -0.666666666666667 0.189 0.00737088854422508 0.63125848628666 -4.16921282077411 0.508284075221101 O75691 UTP20 O75691.S2601.p_UTP20 O75691_S2601s _1_1_2601_2601 O75691 O75691 Small subunit processome component 20 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22313.22313.5 24.27 21.78 99 1 1 1 0 847.4172 4153.0788 S2601s TMT10 2578 (K) IKEDLEEQEALEDGVACADEKAEsDGEEK (E) IKEDLEEQEALEDGVACADEKAES(1.0)DGEEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S UTP20 321004.1 1 5 1054.1 182.86 HUMAN 1 -21.3248 1.9979 CADVRRNSVERPAEP-p Q9BTC0;S1456-p CADVRRNSVERPAEP 0.408442743362247 0.923908380503342 -0.129333333333333 -0.0106666666666667 7.17580700310899 0.48534424746935 -0.129333333333333 -0.0106666666666666 0.191610498030375 0.89426364450234 -1.49175357103831 -0.139270089723477 Q9BTC0 DIDO1 Q9BTC0.S1456.p_DIDO1 Q9BTC0_S1456s _1_1_1456_1456 Q9BTC0 Q9BTC0 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12862.12862.5 23.73 19.8 23.73 3 1 1 0 615.3312 2992.658 S1456s TMT10 1454 (R) RNsVERPAEPVAGAATPSLVEQQK (M) RNS(0.99)VERPAEPVAGAAT(0.0)PS(0.0)LVEQQK K:TMT10,s:Phosphorylated S DIDO1 245579.9 7 19 153.1 505.54 HUMAN 1 -7.1758 -0.4853 CAGGRTWSPTACGGK-p Q15464;S211-p CAGGRTWSPTACGGK 0.871044768133441 0.288264886300684 -0.0256666666666667 -0.138666666666667 1.17291071935742 7.12706706795036 -0.0256666666666667 -0.138666666666667 0.763324018678856 0.193773013442725 -0.316706042020659 -1.48282066349384 Q15464 SHB Q15464.S211.p_SHB Q15464_S211s _1_1_211_211 Q15464 Q15464|Q15464-2 SH2 domain-containing adapter protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13510.13510.2 11.44 11.44 1.578 3 1 1 0 801.8908 1522.8088 S211s TMT10 209 (R) TWsPTACGGK (K) T(0.0)WS(0.99)PT(0.0)ACGGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SHB 55783 6 2 1825.1 112.53 HUMAN 1 -1.1729 -7.1271 CAGVKSSTPPGESYF-p Q9UQ35;T1043-p CAGVKSSTPPGESYF 0.564703045643943 0.116622934933188 0.0763333333333333 0.174666666666667 4.57126365697025 12.3095106116016 0.0763333333333333 0.174666666666667 0.34903874167756 0.0587555557992915 1.02486917004757 2.38612963318069 Q9UQ35 SRRM2 Q9UQ35.T1043.p_SRRM2 Q9UQ35_T1043t _1_1_1043_1043 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27396.27396.2 19.27 11.76 1.315 7 1 1 0 1211.618 2342.2644 T1043t TMT10 1041 (K) SStPPGESYFGVSSLQLK (G) S(0.0)S(0.0)T(0.99)PPGES(0.0)Y(0.0)FGVS(0.0)S(0.0)LQLK K:TMT10,t:Phosphorylated T SRRM2 300351.7 10 53 2.1 3310.34 HUMAN 1 4.5713 12.3095 CAIAQAESLRYKLLG-p P23396-2;S120-p CAIAQAESLRYKLLG 0.910892402066026 0.151055418849939 0.0166666666666667 0.161 0.795916281688274 10.7928519000035 0.0166666666666667 0.161 0.832546255466889 0.0833133907369528 0.221872452471353 2.11892237892808 P23396 RPS3 P23396.2.S120.p_RPS3 P23396-2_S120s _1_1_120_120 P23396-2 P23396-2 Isoform 2 of 40S ribosomal protein S3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19824.19824.3 13.56 13.56 9.978 2 1 1 0 706.7103 2038.152 S120s TMT10 111 (R) GLCAIAQAEsLRYK (L) GLCAIAQAES(0.99)LRY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RPS3 28657.3 1 1 1841.1 111.56 HUMAN 1 0.7959 10.7929 CAKETVLSALKEKKK-p A8CG34;S291-p CAKETVLSALKEKKK 0.209954082227432 0.00234850053989814 -0.297 -0.816 13.083115033311 40.3985540611724 -0.297 -0.816 0.0491686740502658 9.12314534541767e-05 -2.52605465024823 -10.3120900577112 A8CG34 NotFound A8CG34.S291.p_NotFound A8CG34_S291s _1_1_291_291 A8CG34 Q96HA1|A8CG34|A0A075B7F8|Q96HA1-3|A8CG34-2|A0A087WY75|Q96HA1-2 Nuclear envelope pore membrane protein POM 121C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24312.24312.2 10.93 3.96 3.908 2 1 1 0 699.9047 1318.8346 S291s TMT10 287 (K) ETVLsALK (E) ET(0.0)VLS(0.99)ALK K:TMT10,s:Phosphorylated S POM121C 125455.9 3 14 133.2 532.02 HUMAN 1 -13.0831 -40.3986 CAKGGPLSPRKDAGR-p O15417;S2033-p CAKGGPLSPRKDAGR 0.200611254252996 0.0144024410844807 -0.195 -0.514666666666667 13.5662400690632 25.532617891803 -0.195 -0.514666666666667 0.0439922316042481 0.00279729462488125 -2.61361850528959 -5.17331273384058 O15417 TNRC18 O15417.S2033.p_TNRC18 O15417_S2033s _1_1_2033_2033 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7510.7510.2 9.75 2.16 99 1 1 1 0 496.7601 912.5464 S2033s TMT10 2029 (K) GGPLsPR (K) GGPLS(1.0)PR s:Phosphorylated S TNRC18 316168 3 21 75.1 647.68 HUMAN 1 -13.5662 -25.5326 CAPSPDRSPELSSSR-p Q96T37;S674-p CAPSPDRSPELSSSR 0.300973278728137 0.169111321833717 0.148333333333333 0.140333333333333 9.79173460487375 10.151490105176 0.148333333333333 0.140333333333333 0.104912331720439 0.0965719474712914 1.94554931661184 2.00721659397769 Q96T37 RBM15 Q96T37.S674.p_RBM15 Q96T37_S670sS674s_2_2_670_674 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5418.5418.3 9.34 9.34 2.391 5 2 2 0 724.6428 2011.9817 S670s S674s TMT10 666 (R) HCAPsPDRsPELSSSR (D) HCAPS(0.99)PDRS(0.99)PELS(0.0)S(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S RBM15 107414.9 7 37 55.1 724.11 HUMAN 1 9.7917 10.1515 CARQETDYVLNNGFN-p Q8N3E9;Y706-p CARQETDYVLNNGFN 0.788756991728145 0.149684865013237 0.053 -0.297666666666667 1.98715137752223 10.852800870441 0.053 -0.297666666666667 0.632826798754032 0.0821712536680513 0.505954737186232 -2.12939553356588 Q8N3E9 PLCD3 Q8N3E9.Y706.p_PLCD3 Q8N3E9_Y706y _1_1_706_706 Q8N3E9 Q8N3E9 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.19797.19797.3 15.82 15.82 4.405 2 1 1 0 659.3055 1895.9449 Y706y TMT10 702 (R) QETDyVLNNGFNPR (W) QET(0.0)DY(0.99)VLNNGFNPR y:Phosphorylated Y PLCD3 90169.7 1 1 224.1 15.82 HUMAN 1 1.9872 -10.8528 CARRNLGSINTELQD-p O75396;S137-p CARRNLGSINTELQD 0.465487879086741 0.00400118442562249 -0.152333333333333 1.08066666666667 6.12959306325965 35.3476521165141 -0.152333333333333 1.08066666666667 0.243803925352231 0.000291900466025062 -1.30761680514157 8.22308092532993 O75396 SEC22B O75396.S137.p_SEC22B O75396_S137s _1_1_137_137 O75396 O75396 Vesicle-trafficking protein SEC22b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20677.20677.2 18.23 18.23 2.222 2 1 1 0 948.4744 1815.9762 S137s TMT10 134 (R) NLGsINTELQDVQR (I) NLGS(0.99)INT(0.0)ELQDVQR s:Phosphorylated S SEC22B 24821.1 3 1 3041.1 62.34 HUMAN 1 -6.1296 35.3477 CASSESDSDENQNKS-p Q6PD62;S1059-p CASSESDSDENQNKS 0.843544864640525 0.00913572528040673 0.0593333333333333 1.76066666666667 1.43076189414226 28.8431886252307 0.0593333333333333 1.76066666666667 0.719322774262578 0.00130521223886289 0.378693871022339 6.07858863978617 Q6PD62 CTR9 Q6PD62.S1059.p_CTR9 Q6PD62_S1059s _1_1_1059_1059 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4491.4491.3 14.38 14.38 3.25 4 1 1 0 822.7187 2386.1759 S1059s TMT10 1051 (K) KCASSESDsDENQNK (S) KCAS(0.0)S(0.0)ES(0.0)DS(0.99)DENQNK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CTR9 134412.8 1 7 152.1 508.81 HUMAN 1 1.4308 28.8432 CASTLTVSSGSSRGS-p Q9ULE0;S364-p CASTLTVSSGSSRGS 0.665544717655066 0.246185227108675 0.0623333333333333 0.131666666666667 3.30546399066171 8.02094015604235 0.0623333333333333 0.131666666666667 0.467147039544613 0.157726978706482 0.781801033629754 1.63827228537592 Q9ULE0 WWC3 Q9ULE0.S364.p_WWC3 Q9ULE0_S364s _1_1_364_364 Q9ULE0 Q9ULE0|Q9ULE0-2 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14356.14356.3 11.58 11.58 1.201 8 1 1 0 607.9588 1741.8952 S364s TMT10 355 (K) SLCASTLTVsSGSSR (G) S(0.0)LCAS(0.0)T(0.0)LT(0.0)VS(0.99)S(0.0)GS(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S WWC3 123814.7 7 7 161.1 495.35 HUMAN 1 3.3055 8.0209 CATKLSASSEDISER-p Q13233;S923-p CATKLSASSEDISER 0.694699286180922 0.304618145117159 -0.0596666666666667 -0.152666666666667 2.96783328607571 6.8176549904102 -0.0596666666666667 -0.152666666666667 0.504913138081091 0.208081994005287 -0.713871270355291 -1.42867094420172 Q13233 MAP3K1 Q13233.S923.p_MAP3K1 Q13233_S923s _1_1_923_923 Q13233 Q13233 Mitogen-activated protein kinase kinase kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5484.5484.2 11.29 11.54 1.33 4 1 1 0 637.2701 1193.5644 S923s Hydrogen 920 (K) LSAsSEDISER (L) LS(0.0)AS(0.99)S(0.0)EDIS(0.0)ER s:Phosphorylated S MAP3K1 166521 3 10 505.1 289.91 HUMAN 1 -2.9678 -6.8177 CATQMLESMIKKPRP-p P14618;S333-p CATQMLESMIKKPRP 0.490692853704506 0.0202348179849632 -0.0926666666666667 -0.323333333333333 5.69609582047152 23.1971899787598 -0.0926666666666667 -0.323333333333333 0.269395550237749 0.00478939881185121 -1.23023052167126 -4.59599366915852 P14618 PKM P14618.S333.p_PKM P14618_S333s _1_1_333_333 P14618 P14618|P14618-2|P14618-3|B4DNK4|H3BR70 Pyruvate kinase PKM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31839.31839.3 14.59 14.59 6.641 2 1 1 0 882.1451 2564.4581 S333s TMT10 320 (R) AGKPVICATQMLEsMIK (K) AGKPVICAT(0.0)QMLES(0.99)MIK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PKM 58506.4 1 13 502.1 291.2 HUMAN 1 -5.6961 -23.1972 CAVKPCQSDEVPDGI-p Q96HE7;S106-p CAVKPCQSDEVPDGI 0.177986676943927 0.375758400666289 0.237666666666667 -0.0993333333333333 14.8282386636614 5.64405047004348 0.237666666666667 -0.0993333333333333 0.032898502787322 0.272643377403003 2.84629883869381 -1.22060990725912 Q96HE7 ERO1A Q96HE7.S106.p_ERO1A Q96HE7_S106s _1_1_106_106 Q96HE7 Q96HE7|G3V3E6|G3V503 ERO1-like protein alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14809.14809.3 14.01 13.31 99 1 1 1 0 895.7793 2605.3569 S106s TMT10 98 (R) DCAVKPCQsDEVPDGIK (S) DCAVKPCQS(1.0)DEVPDGIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ERO1A 55247.4 1 1 6095.1 14.01 HUMAN 1 14.8282 -5.6441 CAYHHPISPCKAFPN-p Q6PJT7;S620-p CAYHHPISPCKAFPN 0.237912707669171 0.406502929574895 0.324666666666667 -0.123 11.940441254681 5.20403400547637 0.324666666666667 -0.123 0.0639669840033127 0.301714789808949 2.32177497218687 -1.14108165893372 Q6PJT7 ZC3H14 Q6PJT7.S620.p_ZC3H14 Q6PJT7_S620s _1_1_620_620 Q6PJT7 Q6PJT7|Q6PJT7-2|Q6PJT7-9|Q6PJT7-5|G3V256|Q6PJT7-11|Q6PJT7-3|Q6PJT7-4|Q6PJT7-10|G3V411|G3V5I6|Q6PJT7-6|Q6PJT7-8 Zinc finger CCCH domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7177.7177.4 22.18 22.18 11.466 2 1 1 0 581.5162 2243.0738 S620s TMT10 609 (K) NGDECAYHHPIsPCK (A) NGDECAY(0.0)HHPIS(0.99)PCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZC3H14 83844.1 11 19 420.1 320.31 HUMAN 1 11.9404 -5.204 CCGNCSDSEEELPTR-p P43250;S568-p CCGNCSDSEEELPTR 0.728632435939496 0.963708824036337 0.0563333333333333 0.00566666666666667 2.61058968664875 0.229036300807065 0.0563333333333333 0.00566666666666664 0.548202524726283 0.948628940652191 0.640144690179281 0.0674657681771574 P43250 GRK6 P43250.S568.p_GRK6 P43250_S566sS568s_2_2_566_568 P43250 P43250|F8W9W2 G protein-coupled receptor kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19422.19422.3 9.4 9.4 9.397 3 2 2 0 853.987 2399.0111 N564n S566s S568s TMT10 559 (R) QDCCGnCsDsEEELPTRL (-) QDCCGN(1.0)CS(0.99)DS(0.99)EEELPT(0.0)RL C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S GRK6 67245 4 5 3249.1 55.9 HUMAN 1 2.6106 0.229 CCIVTSTYGWTANME-p P08238;Y596-p CCIVTSTYGWTANME 0.216189445592334 0.942309811585179 0.22 0.00966666666666668 12.8185405104784 0.369281999012766 0.22 0.00966666666666667 0.0522571774902576 0.91848443313965 2.47841973412578 0.107201099470779 P08238 HSP90AB1 P08238.Y596.p_HSP90AB1 P08238_Y596y _1_1_596_596 P08238 P08238 Heat shock protein HSP 90-beta GG20160819_MSz_CCLE_T4D7_pY_Injection_01.32585.32585.3 27.68 27.68 2.39 7 1 1 0 914.4156 2661.2672 Y596y TMT10 584 (R) LVSSPCCIVTSTyGWTANMER (I) LVS(0.0)S(0.0)PCCIVT(0.0)S(0.0)T(0.0)Y(0.99)GWT(0.0)ANMER C:Carbamidomethylation,y:Phosphorylated Y HSP90AB1 83605 3 7 3.2 124.79 HUMAN 1 12.8185 0.3693 CCRRRKRSDDHLIPI-p Q8IZK6;S558-p CCRRRKRSDDHLIPI 0.389389394272965 0.534542852397453 0.153 -0.0766666666666666 7.57656023286954 3.65927667388907 0.153 -0.0766666666666667 0.17472054540469 0.430598321527957 1.5616064212148 -0.851277303559709 Q8IZK6 MCOLN2 Q8IZK6.S558.p_MCOLN2 Q8IZK6_S558s _1_1_558_558 Q8IZK6 Q8IZK6|Q8IZK6-2 Mucolipin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11082.11082.3 9.74 9.74 9.744 2 1 1 0 530.6138 1509.8587 S558s Hydrogen 556 (R) KRsDDHLIPIS (-) KRS(0.99)DDHLIPIS(0.0) K:TMT10-Lys-Only,s:Phosphorylated S MCOLN2 67024.4 4 2 4671.1 28.15 HUMAN 1 7.5766 -3.6593 CCSDAGDSPLKPVSC-p Q96M89;S154-p CCSDAGDSPLKPVSC 0.662515509657473 0.00467944897649389 0.0656666666666667 -0.614666666666667 3.34797216847509 34.0734492379227 0.0656666666666667 -0.614666666666667 0.462596969284098 0.000391430872810051 0.790245041535009 -7.7592691563344 Q96M89 CCDC138 Q96M89.S154.p_CCDC138 Q96M89_S154s _1_1_154_154 Q96M89 Q96M89|Q96M89-2 Coiled-coil domain-containing protein 138 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12945.12945.4 15.48 15.48 2.607 4 1 1 0 719.5976 2795.3981 S154s TMT10 145 (R) TECCSDAGDsPLKPVSCPK (S) T(0.0)ECCS(0.0)DAGDS(0.99)PLKPVS(0.0)CPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCDC138 76958.9 1 3 2970.1 64.38 HUMAN 1 3.348 -34.0734 CDAEGRASPAEGSAG-p A4D1S0;S204-p CDAEGRASPAEGSAG 0.900729474872813 0.608886303589603 0.0226666666666667 -0.052 0.88936883665465 2.92765826352103 0.0226666666666667 -0.052 0.814822694194115 0.509605578737796 0.24589280717314 -0.705582513733261 A4D1S0 KLRG2 A4D1S0.S204.p_KLRG2 A4D1S0_S204s _1_1_204_204 A4D1S0 A4D1S0|A4D1S0-2 Killer cell lectin-like receptor subfamily G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5507.5507.4 23.69 23.69 4.027 7 1 1 0 780.8217 3040.2992 S204s TMT10 193 (R) TESGCDAEGRAsPAEGSAGSPGSPTCCR (C) T(0.0)ES(0.0)GCDAEGRAS(0.99)PAEGS(0.0)AGS(0.0)PGS(0.0)PT(0.0)CCR C:Carbamidomethylation,s:Phosphorylated S KLRG2 43534.4 2 10 945.1 197.69 HUMAN 1 0.8894 -2.9277 CDEEFSDSEDEGEGG-p Q92769;S424-p CDEEFSDSEDEGEGG 0.295108437438978 0.951789947381814 0.163666666666667 0.00633333333333334 9.99544117744058 0.30535744146203 0.163666666666667 0.00633333333333334 0.100105025882263 0.932103751374957 1.98091843845825 0.0892282936749403 Q92769 HDAC2 Q92769.S424.p_HDAC2 Q92769_S422sS424s_2_2_422_424 Q92769 Q92769|Q92769-3 Histone deacetylase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11398.11815.3 16.93 16.93 99 2 2 2 0 849.6596 2387.0255 S422s S424s TMT10 415 (R) IACDEEFsDsEDEGEGGRR (N) IACDEEFS(1.0)DS(1.0)EDEGEGGRR C:Carbamidomethylation,s:Phosphorylated S HDAC2 55933.8 39 13 700.2 240.49 HUMAN 1 9.9954 0.3054 CDFCLGDSKINKKTG-p J3KMZ8;S294-p CDFCLGDSKINKKTG 0.887539377298516 0.0107721098657256 -0.0256666666666667 0.491666666666667 1.00941339644307 27.5837369244108 -0.0256666666666667 0.491666666666667 0.792608381229715 0.00174432059126631 -0.276238014859641 5.72123103513303 J3KMZ8 DPF2 J3KMZ8.S294.p_DPF2 J3KMZ8_S294s _1_1_294_294 J3KMZ8 J3KMZ8|Q92785 Zinc finger protein ubi-d4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24676.24676.4 24.48 19.23 6.759 2 1 1 0 777.8842 3028.5475 S294s TMT10 275 (K) KGPDGLALPNNYCDFCLGDsK (I) KGPDGLALPNNY(0.0)CDFCLGDS(0.99)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DPF2 46920.6 2 4 1300.1 156.5 HUMAN 1 -1.0094 27.5837 CDGKSESSPEREAVD-p Q8NEZ4-3;S1251-p CDGKSESSPEREAVD 0.0622808715508477 0.803734070142981 -0.467666666666667 0.106333333333333 26.2217560372511 1.32766560730951 -0.467666666666667 0.106333333333333 0.00238684598445118 0.73660292532726 -5.36001520440597 0.35412740824758 Q8NEZ4 KMT2C Q8NEZ4.3.S1251.p_KMT2C Q8NEZ4-3_S1248sS1250sS1251s_3_3_1248_1251 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17254.17254.4 7.76 7.76 7.761 4 3 3 0 935.9002 3500.6612 S1248s S1250s S1251s TMT10 1238 (R) EGELMDCDGKsEssPEREAVDDETK (G) EGELMDCDGKS(0.99)ES(0.99)S(0.99)PEREAVDDET(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2C 554869.1 1 29 88.1 626.31 HUMAN 1 -26.2218 1.3277 CDHPQIMSPLAKWHR-p Q15046-2;S498-p CDHPQIMSPLAKWHR 0.966490451651987 0.251023114300276 0.009 0.115333333333333 0.286258491889673 7.90746327541524 0.009 0.115333333333333 0.936211886538155 0.161902543818955 0.0838216694959932 1.61859697169952 Q15046 KARS Q15046.2.S498.p_KARS Q15046-2_S498s _1_1_498_498 Q15046-2 Q15046-2 Isoform Mitochondrial of Lysine--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36572.36572.5 24.58 24.58 1.79 3 1 1 0 754.3868 3687.9353 S498s TMT10 475 (K) LVGEFLEVTCINPTFICDHPQIMsPLAK (W) LVGEFLEVT(0.0)CINPT(0.0)FICDHPQIMS(0.99)PLAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KARS 71952.2 4 1 2750.1 71.85 HUMAN 1 0.2863 7.9075 CDHSQTDSLEDEEIE-p P51178-2;S216-p CDHSQTDSLEDEEIE 0.608865588889432 0.132739101325054 -0.068 0.160666666666667 3.98877644359833 11.5592103838379 -0.068 0.160666666666667 0.399137337190584 0.0698359365329947 -0.914983614486787 2.25330973652339 P51178 PLCD1 P51178.2.S216.p_PLCD1 P51178-2_S216s _1_1_216_216 P51178-2 P51178-2 Isoform 2 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23680.23680.4 19.14 14.22 1.404 4 1 1 0 850.6473 3319.5829 S216s TMT10 205 (K) IFRECDHSQTDsLEDEEIEAFYK (M) IFRECDHS(0.0)QT(0.0)DS(0.99)LEDEEIEAFY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PLCD1 88932.1 2 2 1846.1 111.27 HUMAN 1 -3.9888 11.5592 CDLCSDFSDEEPVGA-p Q5T890;S769-p CDLCSDFSDEEPVGA 0.30062605052911 0.703953959582358 -0.177333333333333 0.0443333333333334 9.80401207189116 2.09514122108578 -0.177333333333333 0.0443333333333334 0.104616164304883 0.617285219078678 -1.94767991251944 0.529707562546107 Q5T890 ERCC6L2 Q5T890.S769.p_ERCC6L2 Q5T890_S766sS769s_2_2_766_769 Q5T890 Q5T890 DNA excision repair protein ERCC-6-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24012.24012.3 13.65 13.65 6.205 3 2 2 0 973.4165 2758.2952 S766s S769s TMT10 760 (K) EACDLCsDFsDEEPVGATGIK (T) EACDLCS(0.99)DFS(0.99)DEEPVGAT(0.0)GIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ERCC6L2 179064 1 4 3196.1 57.87 HUMAN 1 -9.804 2.0951 CDLVSNQSAEGLLED-p A6NHB5;S962-p CDLVSNQSAEGLLED 0.38996170793626 0.0115864077268657 -0.279333333333333 0.4 7.56505075614236 27.0807257680338 -0.279333333333333 0.4 0.175184196025294 0.00195851734996802 -1.5596039504649 5.58307220652705 A6NHB5 NotFound A6NHB5.S962.p_NotFound A6NHB5_S962s _1_1_962_962 A6NHB5 A6NHB5|Q14202|Q14202-2|A6NHN7 Zinc finger MYM-type protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.36910.36910.5 30.32 22.83 2.195 4 1 1 0 904.8317 4440.1773 S962s TMT10 950 (K) ASSDLCDLVSNQsAEGLLEDCDLFGPARDDVLAMAVK (M) AS(0.0)S(0.0)DLCDLVS(0.0)NQS(0.99)AEGLLEDCDLFGPARDDVLAMAVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZMYM3 156426.3 6 12 331.1 357.99 HUMAN 1 -7.5651 27.0807 CDPDSGGSQGLRGCG-p Q9C0C2;S1331-p CDPDSGGSQGLRGCG 0.758659686129506 0.277981764400795 -0.0426666666666667 -0.132666666666667 2.29849879413734 7.32616077969935 -0.0426666666666667 -0.132666666666667 0.589047233430362 0.185090411953823 -0.573936988193829 -1.51755472876221 Q9C0C2 TNKS1BP1 Q9C0C2.S1331.p_TNKS1BP1 Q9C0C2_S1328sS1331s_2_2_1328_1331 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17869.17869.3 14.8 14.8 2.557 3 2 2 0 732.3024 2034.96 S1328s S1331s TMT10 1319 (R) DLEVTCDPDsGGsQGLR (G) DLEVT(0.0)CDPDS(0.99)GGS(0.99)QGLR C:Carbamidomethylation,s:Phosphorylated S TNKS1BP1 182819.3 4 84 4.1 2105.7 HUMAN 1 -2.2985 -7.3262 CDSVPPGTPPPIESF-p Q86YC2;T809-p CDSVPPGTPPPIESF 0.895747576491994 0.00752314179680432 0.0193333333333333 -0.482666666666667 0.936280748442305 30.342429743046 0.0193333333333333 -0.482666666666667 0.806068454111845 0.00092418097865553 0.257817855836841 -6.52648823615149 Q86YC2 PALB2 Q86YC2.T809.p_PALB2 Q86YC2_T809t _1_1_809_809 Q86YC2 Q86YC2|H3BN63 Partner and localizer of BRCA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26683.26683.4 25.86 25.86 5.118 5 1 1 0 825.8902 3220.5695 T809t TMT10 795 (R) QGQPTCDCDSVPPGtPPPIESFTFK (E) QGQPT(0.0)CDCDS(0.0)VPPGT(0.99)PPPIES(0.0)FT(0.0)FK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T PALB2 133061.7 2 12 934.1 198.86 HUMAN 1 0.9363 -30.3424 CDVTDNQSEVADKTE-p H3BVG0;S404-p CDVTDNQSEVADKTE 0.417601052440412 0.0720779829470236 -0.109 0.212666666666667 6.99961447768433 15.1783839763565 -0.109 0.212666666666667 0.199543944185461 0.0303502031486115 -1.46094572859777 2.91004798304844 H3BVG0 NotFound H3BVG0.S404.p_NotFound H3BVG0_S404s _1_1_404_404 H3BVG0 H3BVG0|Q8N1F7|Q8N1F7-2 Nuclear pore complex protein Nup93 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27041.27041.4 21.06 14.54 3.397 4 1 1 0 824.9066 3216.6338 S404s TMT10 397 (R) CDVTDNQsEVADKTEDYLWLK (L) CDVT(0.0)DNQS(0.99)EVADKT(0.0)EDY(0.0)LWLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NUP93 100351.7 1 9 862.1 210.52 HUMAN 1 -6.9996 15.1784 CEAAGENSDGGDNES-p A0A1W2PR28;S691-p CEAAGENSDGGDNES 0.984880457815387 0.216229593084883 0.00633333333333331 0.501666666666667 0.133844339359407 8.75177543547119 0.00633333333333328 0.501666666666667 0.969651259848472 0.133297638785067 0.0398374295673055 1.76477915305611 A0A1W2PR28 NotFound A0A1W2PR28.S691.p_NotFound A0A1W2PR28_S691s _1_1_691_691 A0A1W2PR28 Q5JU85-2|A0A1W2PR28|Q5JU85-3 IQ motif and SEC7 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11129.11129.4 30.66 30.66 4.714 12 1 1 0 1108.7261 4351.9163 S691s TMT10 681 (R) LGKCEAAGENsDGGDNESLESSSNSNETINCSSGSSSR (D) LGKCEAAGENS(0.99)DGGDNES(0.0)LES(0.0)S(0.0)S(0.0)NS(0.0)NET(0.0)INCS(0.0)S(0.0)GS(0.0)S(0.0)S(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S IQSEC2 128893.2 1 6 1275.1 159.32 HUMAN 1 0.1338 8.7518 CECGVPISPNPANIC-p Q96D46;S25-p CECGVPISPNPANIC 0.263371875872245 0.142404966107686 0.166 0.179666666666667 10.9910447413453 11.1554486670091 0.166 0.179666666666667 0.079596784889319 0.0766399359817137 2.15454053025203 2.18236529524423 Q96D46 NMD3 Q96D46.S25.p_NMD3 Q96D46_S25s _1_1_25_25 Q96D46 C9JA08|Q96D46 60S ribosomal export protein NMD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24926.24926.4 22.65 22.65 18.14 2 1 1 0 840.8914 3280.5719 S25s TMT10 11 (R) SPGHILCCECGVPIsPNPANICVACLR (S) S(0.0)PGHILCCECGVPIS(0.99)PNPANICVACLR C:Carbamidomethylation,s:Phosphorylated S NMD3 58800.3 4 2 1402.1 146.41 HUMAN 1 10.991 11.1554 CEEEFSDSEEEGEGG-p Q13547;S423-p CEEEFSDSEEEGEGG 0.217253177036105 0.786307857599817 0.194 0.0266666666666667 12.773005643162 1.44917160551769 0.194 0.0266666666666667 0.0528079654597931 0.716280023929518 2.47024308115424 0.382999703416403 Q13547 HDAC1 Q13547.S423.p_HDAC1 Q13547_S421sS423s_2_2_421_423 Q13547 Q13547 Histone deacetylase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14478.14478.2 15.84 15.84 99 2 2 2 0 1209.949 2258.9557 S421s S423s TMT10 414 (R) IACEEEFsDsEEEGEGGR (K) IACEEEFS(1.0)DS(1.0)EEEGEGGR C:Carbamidomethylation,s:Phosphorylated S HDAC1 55672.5 62 7 700.1 240.49 HUMAN 1 12.773 1.4492 CEEQGMESPLPAEDD-p P57740;S734-p CEEQGMESPLPAEDD 0.815882402475188 0.100579006559462 0.0376666666666667 0.175 1.69598776032931 13.1790832704157 0.0376666666666667 0.175 0.676707864829379 0.0480940857034506 0.440371788910941 2.54196969140299 P57740 NUP107 P57740.S734.p_NUP107 P57740_S734s _1_1_734_734 P57740 P57740|P57740-2|P57740-3 Nuclear pore complex protein Nup107 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26200.26200.5 27.51 20.56 1.677 3 1 1 0 930.8277 4570.1486 S734s TMT10 715 (K) IPQDSIAEIYNQCEEQGMEsPLPAEDDNAIREHLCIR (A) IPQDS(0.0)IAEIY(0.0)NQCEEQGMES(0.99)PLPAEDDNAIREHLCIR C:Carbamidomethylation,s:Phosphorylated S NUP107 107113.9 4 10 1162.1 171.06 HUMAN 1 1.696 13.1791 CEESLAASPMAAKPD-p Q5T1M5;S1065-p CEESLAASPMAAKPD 0.202893185580468 0.0198748871748453 -0.250666666666667 -0.485666666666667 13.4275274836621 23.343205579749 -0.250666666666667 -0.485666666666667 0.0454200127330403 0.00463104970210824 -2.58839805442628 -4.63074608534014 Q5T1M5 FKBP15 Q5T1M5.S1065.p_FKBP15 Q5T1M5_S1065s _1_1_1065_1065 Q5T1M5 Q5T1M5|Q5T1M5-2 FK506-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.29441.29646.5 21.83 21.83 2.222 7 1 1 0 986.295 4847.476 S1065s TMT10 1037 (R) VLGPPTSIPPEPLGPVSMDSECEESLAAsPMAAKPDNPSGK (V) VLGPPT(0.0)S(0.0)IPPEPLGPVS(0.0)MDS(0.0)ECEES(0.0)LAAS(0.99)PMAAKPDNPS(0.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FKBP15 134140.9 3 14 173.1 487.64 HUMAN 1 -13.4275 -23.3432 CEEVRRKSELFNPVS-p H8Y6P7;S469-p CEEVRRKSELFNPVS 0.093820150721553 0.17601998354481 -0.493333333333333 -0.347666666666667 21.855173391273 9.92103092750647 -0.493333333333333 -0.347666666666667 0.00652352995404939 0.101834962369886 -4.28888949994231 -1.96720558505608 H8Y6P7 GCOM1 H8Y6P7.S469.p_GCOM1 H8Y6P7_S469s _1_1_469_469 H8Y6P7 H8Y6P7|P0CAP2|P0CAP2-3 GRINL1A combined protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19540.19540.4 12.35 10.92 12.348 2 1 1 0 615.839 2380.3626 S469s TMT10 467 (R) RKsELFNPVSLDCK (L) RKS(0.99)ELFNPVS(0.0)LDCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GCOM1 88318.6 1 1 2612.1 76.74 HUMAN 1 -21.8552 -9.921 CEGEEPKSDLKAARS-p Q9H910-3;S153-p CEGEEPKSDLKAARS 0.900356606703368 0.00474259291577742 0.019 -0.547 0.892157150811379 33.9786610048215 0.019 -0.547 0.814299718987088 0.000400068077751085 0.246604036595112 -7.72568672890093 Q9H910 HN1L Q9H910.3.S153.p_HN1L Q9H910-3_S153s _1_1_153_153 Q9H910-3 Q9H910-3|A6NGP5|Q9H910-2 Isoform 3 of Jupiter microtubule associated homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15928.15928.3 18.91 18.91 99 1 1 1 0 890.7894 2590.379 S153s TMT10 141 (K) DHVFLCEGEEPKsDLK (A) DHVFLCEGEEPKS(1.0)DLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S JPT2 23082.3 1 8 1318.1 154.67 HUMAN 1 0.8922 -33.9787 CEGKGSPSPEKPDVE-p Q93074-2;S700-p CEGKGSPSPEKPDVE 0.377838045905345 0.251233974513726 -0.180333333333333 -0.131333333333333 7.81318684323543 7.90129541601189 -0.180333333333333 -0.131333333333333 0.165455540883137 0.162132641507526 -1.60273591844168 -1.61752717812218 Q93074 MED12 Q93074.2.S700.p_MED12 Q93074-2_S700s _1_1_700_700 Q93074-2 Q93074-2|Q93074-3|Q7Z3Z5 Isoform 2 of Mediator of RNA polymerase II transcription subunit 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10262.10262.4 13.52 13.52 2.162 2 1 1 0 510.0277 1957.1209 S700s TMT10 697 (K) GSPsPEKPDVEK (E) GS(0.0)PS(0.99)PEKPDVEK K:TMT10,s:Phosphorylated S MED12 246128.1 2 6 2302.1 89.02 HUMAN 1 -7.8132 -7.9013 CEGLIVRSATKVTAD-p A0A2C9F2M7;S55-p CEGLIVRSATKVTAD 0.94478758147709 0.231869998976358 -0.014 0.175333333333333 0.484070820387881 8.36054254070434 -0.014 0.175333333333333 0.894525896628872 0.145863202985002 -0.138934954749185 1.69709091777937 A0A2C9F2M7 NotFound A0A2C9F2M7.S55.p_NotFound A0A2C9F2M7_S55s _1_1_55_55 A0A2C9F2M7 O43175|A0A2C9F2M7|A0A286YF22|A0A286YFA2|A0A286YFL2|A0A286YFB2|A0A286YFC8|A0A286YER3 D-3-phosphoglycerate dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28443.28443.4 18.46 18.46 2.182 2 1 1 0 703.8703 2732.4905 S55s TMT10 39 (K) EELIAELQDCEGLIVRsATK (V) EELIAELQDCEGLIVRS(0.99)AT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PHGDH 56909.6 7 3 1205.1 166.89 HUMAN 1 -0.4841 8.3605 CEGPEEESEDDSHLE-p A0A1B0GVH5;S256-p CEGPEEESEDDSHLE 0.525661031242721 0.434085164239236 0.108333333333333 0.077 5.16554782513547 4.82922362027853 0.108333333333333 0.077 0.304400399088183 0.328910424291638 1.13431086953422 1.07245697205211 A0A1B0GVH5 NotFound A0A1B0GVH5.S256.p_NotFound A0A1B0GVH5_S256s _1_1_256_256 A0A1B0GVH5 A0A1B0GVH5|A0A1B0GTC3|Q9C0B1|A0A1B0GU26|A0A1B0GTC5|A0A1B0GV98|A0A1B0GUC3|A0A1B0GTY1 Alpha-ketoglutarate-dependent dioxygenase FTO HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14916.14916.3 27.91 27.91 3.386 7 1 1 0 1071.1152 3131.3585 S256s TMT10 240 (R) SAVAVYSYSCEGPEEEsEDDSHLEGR (D) S(0.0)AVAVY(0.0)S(0.0)Y(0.0)S(0.0)CEGPEEES(0.99)EDDS(0.0)HLEGR C:Carbamidomethylation,s:Phosphorylated S FTO 65116.6 4 2 2107.1 97.42 HUMAN 1 5.1655 4.8292 CEGRSAGSIPGERST-p Q04206;S45-p CEGRSAGSIPGERST 0.420315080186999 0.960003970681119 -0.131333333333333 0.00933333333333335 6.94928177919271 0.255421904632258 -0.131333333333333 0.00933333333333334 0.201870018155255 0.942883008630688 -1.45213230405053 0.0750278541087346 Q04206 RELA Q04206.S45.p_RELA Q04206_S45s _1_1_45_45 Q04206 Q04206|Q04206-4|Q04206-3|Q04206-2|A0A087X0W8|Q2TAM5 Transcription factor p65 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7014.7014.2 11.68 7.38 3.549 2 1 1 0 591.7896 1102.6054 S45s TMT10 42 (R) SAGsIPGER (S) S(0.0)AGS(0.99)IPGER s:Phosphorylated S RELA 60731.6 1 1 3962.1 40.17 HUMAN 1 -6.9493 0.2554 CEGTEINSDDEQESK-p Q9BPX3;S674-p CEGTEINSDDEQESK 0.674466012546412 0.865180315175624 -0.0763333333333333 -0.0216666666666667 3.20615197616628 0.886375647471993 -0.0763333333333334 -0.0216666666666667 0.477952571307648 0.815384469493827 -0.761981896899509 -0.245105186270772 Q9BPX3 NCAPG Q9BPX3.S674.p_NCAPG Q9BPX3_S674s _1_1_674_674 Q9BPX3 Q9BPX3 Condensin complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14469.14469.4 26.02 26.02 4.842 6 1 1 0 955.2034 3737.8267 S674s TMT10 664 (K) TLHCEGTEINsDDEQESKEVEETATAK (N) T(0.0)LHCEGT(0.0)EINS(0.99)DDEQES(0.0)KEVEET(0.0)AT(0.0)AK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NCAPG 115416.1 12 1 1123.1 174.85 HUMAN 1 -3.2062 -0.8864 CEHPNQVSPVKICDF-p Q9HBH9;S220-p CEHPNQVSPVKICDF 0.0305108291507796 0.00610722006685881 -1.062 -0.524333333333333 35.4331987309349 31.9211505821058 -1.062 -0.524333333333334 0.000286206917923206 0.00064251747176408 -8.27136121645242 -7.02652550436336 Q9HBH9 MKNK2 Q9HBH9.S220.p_MKNK2 Q9HBH9_S220s _1_1_220_220 Q9HBH9 Q9HBH9|Q9HBH9-2 MAP kinase-interacting serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18521.18521.5 15.45 15.45 99 1 1 1 0 597.723 2904.622 S220s TMT10 205 (R) DLKPENILCEHPNQVsPVK (I) DLKPENILCEHPNQVS(1.0)PVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MKNK2 52786.8 2 2 2773.1 71.17 HUMAN 1 -35.4332 -31.9212 CEPEVLNSLEETYSP-p Q6PJT7;S268-p CEPEVLNSLEETYSP 0.421053324853859 0.886376058256531 0.114 0.0183333333333334 6.92713037981698 0.73642679414274 0.114 0.0183333333333334 0.202902296267008 0.844028906278567 1.44825164661292 0.2063714367468 Q6PJT7 ZC3H14 Q6PJT7.S268.p_ZC3H14 Q6PJT7_S268s _1_1_268_268 Q6PJT7 Q6PJT7|Q6PJT7-2|Q6PJT7-9|Q6PJT7-5|G3V256|Q6PJT7-11|Q6PJT7-3|Q6PJT7-4|Q6PJT7-10|G3V5I6 Zinc finger CCCH domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.35967.35967.3 20.97 20.97 4.238 4 1 1 0 880.414 2559.2639 S268s TMT10 260 (R) LCEPEVLNsLEETYSPFFR (N) LCEPEVLNS(0.99)LEET(0.0)Y(0.0)S(0.0)PFFR C:Carbamidomethylation,s:Phosphorylated S ZC3H14 83844.1 3 5 420.1 320.31 HUMAN 1 6.9271 0.7364 CESPEKVSPVKICDF-p Q9BUB5;S226-p CESPEKVSPVKICDF 0.114394108260794 0.609093386894167 -0.427333333333333 -0.0623333333333333 19.6205269319577 2.9255336735913 -0.427333333333333 -0.0623333333333333 0.0109130791940708 0.509854941278841 -3.79798049434793 -0.705148766655913 Q9BUB5 MKNK1 Q9BUB5.S226.p_MKNK1 Q9BUB5_S226s _1_1_226_226 Q9BUB5 Q9BUB5|Q9BUB5-2|Q9BUB5-3|Q7Z319 MAP kinase-interacting serine/threonine-protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21111.21111.4 17.85 17.85 3.442 2 1 1 0 795.4467 3098.7941 S226s TMT10 211 (R) DLKPENILCESPEKVsPVK (I) DLKPENILCES(0.0)PEKVS(0.99)PVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MKNK1 52083.2 1 3 1937.1 106.18 HUMAN 1 -19.6205 -2.9255 CEVEQWDSDEPIPAK-p U3KQ56;S36-p CEVEQWDSDEPIPAK 0.754302977091833 0.125857016432335 -0.0436666666666667 0.190666666666667 2.339777694582 11.8684158415102 -0.0436666666666667 0.190666666666667 0.583474970259348 0.0650366878788256 -0.582799425514206 2.30788006738564 U3KQ56 NotFound U3KQ56.S36.p_NotFound U3KQ56_S36s _1_1_36_36 U3KQ56 U3KQ56|Q9UBQ7 Glyoxylate reductase/hydroxypyruvate reductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20567.20567.3 12.86 10.12 99 1 1 1 0 866.7331 2518.2172 S36s TMT10 26 (R) AADCEVEQWDsDEPIPAK (E) AADCEVEQWDS(1.0)DEPIPAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GRHPR 39265.4 1 1 4054.1 38.49 HUMAN 1 -2.3398 11.8684 CFHDCSASFEEEPGA-p Q99614;S69-p CFHDCSASFEEEPGA 0.343131300486943 0.00288359380714968 -0.311 -1.06866666666667 8.62877427670334 38.4089714559394 -0.311 -1.06866666666667 0.137126872914306 0.000144245692962417 -1.74410223236867 -9.43826448398661 Q99614 TTC1 Q99614.S69.p_TTC1 Q99614_S67sS69s_2_2_67_69 Q99614 Q99614 Tetratricopeptide repeat protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17739.17739.5 21.2 21.2 99 2 2 2 0 1062.8688 5150.3835 S67s S69s TMT10 45 (K) LLRDDEAHLQEDQGEEECFHDCsAsFEEEPGADKVENK (S) LLRDDEAHLQEDQGEEECFHDCS(1.0)AS(1.0)FEEEPGADKVENK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TTC1 33982 1 3 3145.1 59.36 HUMAN 1 -8.6288 -38.409 CFLVRQASLSRPPES-p Q5T1R4;S1050-p CFLVRQASLSRPPES 0.864679832642579 0.0408184785864336 0.027 0.306666666666667 1.22812752787816 18.620377414647 0.027 0.306666666666667 0.753680445005164 0.0137392257192174 0.330161934125518 3.58586008539574 Q5T1R4 HIVEP3 Q5T1R4.S1050.p_HIVEP3 Q5T1R4_S1050s _1_1_1050_1050 Q5T1R4 Q5T1R4|Q5T1R4-2 Transcription factor HIVEP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16123.16123.3 16.44 16.44 1.111 3 1 1 0 792.7578 2296.2913 S1050s TMT10 1048 (R) QAsLSRPPESELEVAPK (G) QAS(0.99)LS(0.0)RPPES(0.0)ELEVAPK K:TMT10,s:Phosphorylated S HIVEP3 261285.6 2 31 465.1 303.46 HUMAN 1 1.2281 18.6204 CFPKPLLSPEERDIE-p Q52LW3;S913-p CFPKPLLSPEERDIE 0.050054490215346 0.0515260905346487 -0.454333333333333 -0.3 28.7164375929763 17.1917213177523 -0.454333333333333 -0.3 0.00134386684889977 0.0190909644192425 -6.05090553821586 -3.29794333811753 Q52LW3 ARHGAP29 Q52LW3.S913.p_ARHGAP29 Q52LW3_S913s _1_1_913_913 Q52LW3 Q52LW3|F8VWZ8 Rho GTPase-activating protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.35989.35989.4 17.14 17.14 2.174 3 1 1 0 1065.0337 4177.1172 S913s TMT10 885 (K) IFDGSLQPQDVMCSIGVVDQGCFPKPLLsPEER (D) IFDGS(0.0)LQPQDVMCS(0.0)IGVVDQGCFPKPLLS(0.99)PEER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARHGAP29 143601.5 2 12 517.1 284.75 HUMAN 1 -28.7164 -17.1917 CFRKRHKSDNETNLQ-p A0A0U1RR27;S1059-p CFRKRHKSDNETNLQ 0.469754552461702 0.0183574771704011 0.168333333333333 -0.508333333333333 6.06005214929047 23.8921881694445 0.168333333333333 -0.508333333333333 0.2477392309379 0.00408113708619928 1.29525432595882 -4.76295942532236 A0A0U1RR27 NotFound A0A0U1RR27.S1059.p_NotFound A0A0U1RR27_S1059s _1_1_1059_1059 A0A0U1RR27 A0A0U1RR27|Q7Z401-2 C-myc promoter-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12419.12419.4 21.56 21.56 2.27 2 1 1 0 673.5905 2611.3741 S1059s TMT10 1057 (R) HKsDNETNLQQQVVWGNR (N) HKS(0.99)DNET(0.0)NLQQQVVWGNR K:TMT10,s:Phosphorylated S DENND4A 217514.7 4 5 399.1 328.24 HUMAN 1 6.0601 -23.8922 CFSERDFSPLQTQTF-p Q6P4F7;S675-p CFSERDFSPLQTQTF 0.909190676386736 0.00604775327324358 0.0183333333333333 -0.490666666666667 0.811161143166744 32.0381656871021 0.0183333333333333 -0.490666666666667 0.829628925702594 0.000625436800332297 0.225815501724325 -7.06480876258915 Q6P4F7 ARHGAP11A Q6P4F7.S675.p_ARHGAP11A Q6P4F7_S675s _1_1_675_675 Q6P4F7 Q6P4F7|Q6P4F7-3 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19889.19889.3 14.86 10.83 3.541 4 1 1 0 814.7088 2362.1447 S675s TMT10 668 (K) CFSERDFsPLQTQTFNR (E) CFS(0.0)ERDFS(0.99)PLQT(0.0)QT(0.0)FNR C:Carbamidomethylation,s:Phosphorylated S ARHGAP11A 114948.2 2 10 414.1 321.53 HUMAN 1 0.8112 -32.0382 CFSRPSMSPTPLDRC-p Q9UQ35;S2123-p CFSRPSMSPTPLDRC 0.676446338277874 0.313663291878184 0.0596666666666667 0.135666666666667 3.18043272427455 6.65637196218398 0.0596666666666667 0.135666666666667 0.480791440750847 0.215954771299646 0.756827896810743 1.40035041495018 Q9UQ35 SRRM2 Q9UQ35.S2123.p_SRRM2 Q9UQ35_S2123s _1_1_2123_2123 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17098.17547.3 14.52 10.27 1.427 5 1 1 0 726.6635 2098.0081 S2123s TMT10 2114 (R) MSCFSRPSMsPTPLDR (C) MS(0.0)CFS(0.0)RPS(0.0)MS(0.99)PT(0.0)PLDR C:Carbamidomethylation,s:Phosphorylated S SRRM2 300351.7 10 135 2.1 3310.34 HUMAN 1 3.1804 6.6564 CFTIENKTPQGREYG-p Q7KZF4;T103-p CFTIENKTPQGREYG 0.974486381113699 0.00740096593829207 -0.00600000000000001 -0.522333333333333 0.218712942380081 30.4665977232347 -0.006 -0.522333333333333 0.95088655280943 0.000898132118525934 -0.0645017630021168 -6.56473353192545 Q7KZF4 SND1 Q7KZF4.T103.p_SND1 Q7KZF4_T103t _1_1_103_103 Q7KZF4 Q7KZF4 Staphylococcal nuclease domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16629.16629.3 10.2 8.58 3.329 2 1 1 0 739.7073 2137.1476 T103t TMT10 94 (K) EVCFTIENKtPQGR (E) EVCFT(0.0)IENKT(0.99)PQGR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T SND1 102679.8 1 1 1505.1 135.67 HUMAN 1 -0.2187 -30.4666 CFVKVARSPDKPGKG-p P55317;S234-p CFVKVARSPDKPGKG 0.490994191758214 0.0549350907862547 -0.208333333333333 -0.255333333333333 5.68909382839488 16.7936023926353 -0.208333333333333 -0.255333333333333 0.269830238455007 0.0209237614840519 -1.22897385985828 -3.21967660214343 P55317 FOXA1 P55317.S234.p_FOXA1 P55317_S234s _1_1_234_234 P55317 P55317|P55317-2 Hepatocyte nuclear factor 3-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18836.18836.5 15.56 15.56 15.558 6 1 1 0 862.23 4227.1471 S234s TMT10 231 (K) VARsPDKPGKGSYWTLHPDSGNMFENGCYLR (R) VARS(0.99)PDKPGKGS(0.0)Y(0.0)WT(0.0)LHPDS(0.0)GNMFENGCY(0.0)LR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S FOXA1 49375.2 8 2 1359.1 150.2 HUMAN 1 -5.6891 -16.7936 CGAGCYKTQKGTARG-p Q6UWN0-2;T33-p CGAGCYKTQKGTARG 0.163752511066432 0.113394487300798 0.259333333333333 0.180666666666667 15.7453627647879 12.4681776891938 0.259333333333333 0.180666666666667 0.0266356760052714 0.0566476934353812 3.01944853453785 2.41440189905705 Q6UWN0 LYPD4 Q6UWN0.2.T33.p_LYPD4 Q6UWN0-2_T33t_1_1_33_33 Q6UWN0-2 Q6UWN0-2 Isoform 2 of Ly6/PLAUR domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31418.31418.5 8.98 1.84 8.329 5 1 1 0 910.0708 4450.357 M24m T33t Hydrogen 1 (-) MGPQHLRLVQLFCLLGAISTLPRmSCGAGCYKtQK (G) M(0.0)GPQHLRLVQLFCLLGAIS(0.0)T(0.0)LPRM(0.99)S(0.0)CGAGCY(0.0)KT(0.99)QK C:Carbamidomethylation,K:TMT10-Lys-Only,m:Oxidized methionine,t:Phosphorylated T LYPD4 23329.5 1 1 6868.1 8.98 HUMAN 1 15.7454 12.4682 CGDSHPESPVGFGHM-p Q9Y6K0;S18-p CGDSHPESPVGFGHM 0.395332339025014 0.0459665735271904 0.142 -0.255666666666667 7.43502194117184 17.8969290610051 0.142 -0.255666666666667 0.180508561756054 0.0162295730078107 1.53696693156011 -3.43864087755845 Q9Y6K0 CEPT1 Q9Y6K0.S18.p_CEPT1 Q9Y6K0_S18s _1_1_18_18 Q9Y6K0 Q9Y6K0|A0A0C4DGS9 Choline/ethanolaminephosphotransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16578.16578.4 21.32 21.32 7.034 5 1 1 0 778.8582 3032.4429 S18s TMT10 11 (R) CGDSHPEsPVGFGHMSTTGCVLNK (L) CGDS(0.0)HPES(0.99)PVGFGHMS(0.0)T(0.0)T(0.0)GCVLNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CEPT1 47465.6 3 1 3324.1 53.93 HUMAN 1 7.435 -17.8969 CGDTALSSDEEDLSS-p Q6P4R8;S210-p CGDTALSSDEEDLSS 0.285915882712604 0.023133877435803 0.206666666666667 0.477666666666667 10.2604584857356 22.3301247949071 0.206666666666667 0.477666666666667 0.0941790166258726 0.00584773280390641 2.02699954967501 4.39309574526929 Q6P4R8 NFRKB Q6P4R8.S210.p_NFRKB Q6P4R8_S209sS210s_2_2_209_210 Q6P4R8 Q6P4R8 Nuclear factor related to kappa-B-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27308.27308.3 17.91 15.22 3.246 7 2 2 0 1161.8228 3323.5423 S209s S210s Hydrogen 198 (R) EVKEECGDTALssDEEDLSSWLPSSPAR (S) EVKEECGDT(0.0)ALS(0.99)S(0.99)DEEDLS(0.0)S(0.0)WLPS(0.0)S(0.0)PAR K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S NFRKB 139455.1 1 10 791.1 224.91 HUMAN 1 10.2605 22.3301 CGEDEQYSAENLRRI-p Q70EL1;S1408-p CGEDEQYSAENLRRI 0.421053324853859 0.17064918887559 0.162333333333333 0.205333333333333 6.92461128335906 10.0953986154731 0.162333333333333 0.205333333333333 0.203020022543699 0.0978273160248552 1.44781025767172 1.99747298731751 Q70EL1 USP54 Q70EL1.S1408.p_USP54 Q70EL1_S1408s _1_1_1408_1408 Q70EL1 Q70EL1|Q70EL1-7|Q70EL1-8|Q70EL1-10 Inactive ubiquitin carboxyl-terminal hydrolase 54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7115.7115.3 14.69 12.97 4.852 2 1 1 0 722.3104 2084.9505 S1408s TMT10 1400 (R) ECGEDEQYsAENLRR (I) ECGEDEQY(0.0)S(0.99)AENLRR C:Carbamidomethylation,s:Phosphorylated S USP54 189724.2 1 15 525.1 282.54 HUMAN 1 6.9246 10.0954 CGEEGHLSPYCRKGI-p Q9NUD5;S364-p CGEEGHLSPYCRKGI 0.590748705738669 0.180454648061106 -0.09 -0.150666666666667 4.21305402131489 9.78208568929936 -0.0900000000000001 -0.150666666666667 0.37904833898152 0.105145679283514 -0.957642226691658 -1.94310840832711 Q9NUD5 ZCCHC3 Q9NUD5.S364.p_ZCCHC3 Q9NUD5_S364s _1_1_364_364 Q9NUD5 Q9NUD5|Q9NUD5-2 Zinc finger CCHC domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7241.7241.4 14.54 14.54 6.584 2 1 1 0 533.502 2051.0203 S364s TMT10 357 (R) CGEEGHLsPYCRK (G) CGEEGHLS(0.99)PY(0.0)CRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZCCHC3 44416.5 3 1 4633.1 28.58 HUMAN 1 -4.2131 -9.7821 CGERDELSPKRIKVE-p Q13506;S328-p CGERDELSPKRIKVE 0.702360190260937 0.00453264940506604 -0.0533333333333333 -0.549333333333333 2.88540087514046 34.3792709946236 -0.0533333333333334 -0.549333333333333 0.514588305793047 0.000364815179549616 -0.697038231862797 -7.86847464060348 Q13506 NAB1 Q13506.S328.p_NAB1 Q13506_S328s _1_1_328_328 Q13506 Q13506|B8ZZS2|Q13506-2 NGFI-A-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5108.5108.4 10.64 8.87 99 1 1 1 0 471.9899 1804.974 S328s TMT10 321 (K) CGERDELsPKR (I) CGERDELS(1.0)PKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NAB1 54856.9 7 2 2812.1 69.66 HUMAN 1 -2.8854 -34.3793 CGGPGDASPRGCGAR-p P30291;S150-p CGGPGDASPRGCGAR 0.141557816596311 0.000993050805672115 0.279333333333333 -1.49633333333333 17.3516041484814 52.4074545099651 0.279333333333333 -1.49633333333333 0.0184009220320956 5.74453062408043e-06 3.33221030852997 -17.4119363503134 P30291 WEE1 P30291.S150.p_WEE1 P30291_S150s _1_1_150_150 P30291 P30291 Wee1-like protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4509.4509.2 12.09 5.41 99 1 1 1 0 641.7761 1202.5785 S150s TMT10 143 (R) CGGPGDAsPR (G) CGGPGDAS(1.0)PR C:Carbamidomethylation,s:Phosphorylated S WEE1 72280.8 1 2 2739.1 72.21 HUMAN 1 17.3516 -52.4075 CGHLENTSVGNSPNP-p Q96HH9;S221-p CGHLENTSVGNSPNP 0.237912707669171 0.161531008885892 0.229333333333333 -0.196333333333333 11.9397839115273 10.4108571001274 0.229333333333333 -0.196333333333333 0.0639766667055116 0.0909733714783296 2.3216584762337 -2.05232095631202 Q96HH9 GRAMD3 Q96HH9.S221.p_GRAMD3 Q96HH9_S221s _1_1_221_221 Q96HH9 Q96HH9|Q96HH9-4|E9PD09|Q96HH9-5|B7Z4W8|Q96HH9-3 GRAM domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12759.12759.3 23.41 23.41 1.143 7 1 1 0 986.1066 2876.3431 S221s TMT10 212 (K) SVCGHLENTsVGNSPNPSSAENSFR (A) S(0.0)VCGHLENT(0.0)S(0.99)VGNS(0.0)PNPS(0.0)S(0.0)AENS(0.0)FR C:Carbamidomethylation,s:Phosphorylated S GRAMD2B 48324.7 3 7 735.1 235.43 HUMAN 1 11.9398 -10.4109 CGHLFHNSCLRSWLE-p Q9UKV5;S363-p CGHLFHNSCLRSWLE 0.391423993505871 0.0384981473325887 0.17 -0.326 7.51114592049525 19.0037088983579 0.17 -0.326 0.177372140865468 0.0125785074163783 1.55022271751907 -3.66510893381521 Q9UKV5 AMFR Q9UKV5.S363.p_AMFR Q9UKV5_S363s _1_1_363_363 Q9UKV5 Q9UKV5 E3 ubiquitin-protein ligase AMFR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12985.12985.4 9.24 9.24 99 1 1 1 0 570.0432 2197.1887 S363s TMT10 353 (R) KLPCGHLFHNsCLR (S) KLPCGHLFHNS(1.0)CLR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S AMFR 73793.2 1 1 1976.1 104.62 HUMAN 1 7.5111 -19.0037 CGKAFNRSPKLTAHK-p Q9H8G1;S469-p CGKAFNRSPKLTAHK 0.650945476037125 0.00237897422979788 -0.065 -0.918666666666667 3.49826513984523 40.2937396554324 -0.065 -0.918666666666667 0.446862062842775 9.34600554716883e-05 -0.819919382084696 -10.2642772118986 Q9H8G1 ZNF430 Q9H8G1.S469.p_ZNF430 Q9H8G1_S469s _1_1_469_469 Q9H8G1 Q9H8G1 Zinc finger protein 430 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5433.5433.4 8.04 2.11 7.923 2 1 1 0 685.3431 2658.4099 S469s Hydrogen 456 (K) PYKCEECGKAFNRsPK (L) PY(0.0)KCEECGKAFNRS(0.99)PK K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S ZNF430 68200.1 2 147 240.24 415.72 HUMAN 1 -3.4983 -40.2937 CGKAFRNSSGLRVHK-p Q8NB50;S265-p CGKAFRNSSGLRVHK 0.54846223443234 0.0104772276878405 0.0913333333333333 -1.16666666666667 4.81474893722479 27.7706381504375 0.0913333333333333 -1.16666666666667 0.330008484932242 0.00167084508301656 1.069997925947 -5.77321799507253 Q8NB50 ZFP62 Q8NB50.S265.p_ZFP62 Q8NB50_S265s _1_1_265_265 Q8NB50 Q8NB50|Q8NB50-3|Q8NB50-2 Zinc finger protein 62 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7024.7024.3 8.93 8.93 1.202 2 1 1 0 439.5604 1236.701 S265s TMT10 261 (K) AFRNsSGLR (V) AFRNS(0.99)S(0.0)GLR s:Phosphorylated S ZFP62 105647.2 1 101 240.13 415.72 HUMAN 1 4.8147 -27.7706 CGKAFSCSPTLRIHE-p P52737;S292-p CGKAFSCSPTLRIHE 0.567246377055338 0.682565643483629 0.112333333333333 -0.0633333333333333 4.53647818197889 2.26943984681659 0.112333333333333 -0.0633333333333334 0.351845646557978 0.593001805042417 1.01838606831784 -0.567608565960512 P52737 ZNF136 P52737.S292.p_ZNF136 P52737_S292s _1_1_292_292 P52737 P52737 Zinc finger protein 136 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13057.13057.3 7.7 5.12 1.846 3 1 1 0 449.8825 1267.6666 S292s TMT10 288 (K) AFSCsPTLR (I) AFS(0.0)CS(0.99)PT(0.0)LR C:Carbamidomethylation,s:Phosphorylated S ZNF136 64665.3 2 47 240.39 415.72 HUMAN 1 4.5365 -2.2694 CGKGFNDTFDLKRHV-p Q9BRP0;T159-p CGKGFNDTFDLKRHV 0.144309371419586 0.00259997565261951 0.396333333333333 -0.874 17.1620970618028 39.3953922516908 0.396333333333333 -0.874 0.0192216335683295 0.000114937242823044 3.29462969574221 -9.86271226986014 Q9BRP0 OVOL2 Q9BRP0.T159.p_OVOL2 Q9BRP0_T159t _1_1_159_159 Q9BRP0 Q9BRP0|O14753|G3V1B0|Q9BRP0-2 Transcription factor Ovo-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17531.17531.3 7.14 7.14 99 1 1 1 0 584.3043 1670.9266 T159t TMT10 155 (K) GFNDtFDLKR (H) GFNDT(1.0)FDLKR K:TMT10,t:Phosphorylated T OVOL2 31122.3 1 3 4493.1 30.76 HUMAN 1 17.1621 -39.3954 CGLARQNSTSLTGKP-p W0Z7M9;S368-p CGLARQNSTSLTGKP 0.550414369369703 0.0214176435991247 -0.0936666666666667 -0.317333333333333 4.78432739620165 22.8251092813566 -0.0936666666666667 -0.317333333333333 0.332328249815013 0.00521781974493671 -1.06438259136318 -4.50820512740021 W0Z7M9 MKL1 W0Z7M9.S368.p_MKL1 W0Z7M9_S368s _1_1_368_368 W0Z7M9 W0Z7M9|Q969V6|A0A087WU73|B0QY83|A0A087X287|E7ER32 MKL/myocardin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21653.21653.3 15.79 15.79 1.109 4 1 1 0 975.8521 2845.5697 S368s TMT10 366 (R) QNsTSLTGKPGALPANLDDMK (V) Q(0.0)N(0.0)S(0.99)T(0.0)S(0.0)LT(0.0)GKPGALPAN(0.0)LDDM(0.0)K K:TMT10,s:Phosphorylated S mkl1 103399.4 7 4 1467.1 139.9 HUMAN 1 -4.7843 -22.8251 CGLGQENSDNEHLVE-p P46100;S634-p CGLGQENSDNEHLVE 0.705319541148296 0.0320619890330899 0.0513333333333333 0.268333333333333 2.84943995262681 20.1720776219466 0.0513333333333333 0.268333333333333 0.518866945451178 0.00961152362576948 0.6896623583826 3.91227662899156 P46100 ATRX P46100.S634.p_ATRX P46100_S634s _1_1_634_634 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.35477.35477.4 27.08 27.08 12.639 3 1 1 0 877.6585 3427.6485 S634s TMT10 627 (K) CGLGQENsDNEHLVENEVSLLLEESDLR (R) CGLGQENS(0.99)DNEHLVENEVS(0.0)LLLEES(0.0)DLR C:Carbamidomethylation,s:Phosphorylated S ATRX 285034.2 14 12 18.1 1035.36 HUMAN 1 2.8494 20.1721 CGLIEEAYGLDKIEF-p O60684;Y474-p CGLIEEAYGLDKIEF 0.0782221681558717 0.300499631432869 0.386666666666667 -0.405 23.6361029203529 6.89241205284051 0.386666666666667 -0.405 0.00432902115342679 0.204530836575994 4.70643220700615 -1.44177484937408 O60684 KPNA6 O60684.Y474.p_KPNA6 O60684_Y474y _1_1_474_474 O60684 O60684 Importin subunit alpha-7 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.37409.37409.5 28.73 20.82 3.257 6 1 1 0 957.4831 4703.3906 Y474y TMT10 459 (R) SGSGVNPYCGLIEEAyGLDKIEFLQSHENQEIYQK (A) S(0.0)GS(0.0)GVNPY(0.0)CGLIEEAY(0.99)GLDKIEFLQS(0.0)HENQEIY(0.0)QK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y KPNA6 60770.1 2 1 100.1 28.73 HUMAN 1 23.6361 -6.8924 CGLPLMNSFNLKDMA-p Q96S15;S614-p CGLPLMNSFNLKDMA 0.200149573252671 0.128237023063779 -0.241666666666667 0.163 13.5940911802115 11.7619460420037 -0.241666666666667 0.163 0.0437110140693925 0.0666508044880577 -2.6186902850003 2.28906468943099 Q96S15 WDR24 Q96S15.S614.p_WDR24 Q96S15_S614s _1_1_614_614 Q96S15 Q96S15|Q96S15-2 GATOR complex protein WDR24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28753.28753.2 16 14.85 14.756 2 1 1 0 1067.0366 2053.0975 S614s TMT10 604 (K) GGSCGLPLMNsFNLK (D) GGS(0.0)CGLPLMNS(0.99)FNLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WDR24 103984.5 5 3 2568.1 78.27 HUMAN 1 -13.5941 11.7619 CGLPLNCTPIKGLGL-p Q9NVP2;T179-p CGLPLNCTPIKGLGL 0.934343230853707 0.0114094024336253 0.0123333333333333 -0.407333333333333 0.580945618823022 27.1946286612207 0.0123333333333333 -0.407333333333333 0.874793279816862 0.00190781884299414 0.165186182185995 -5.61413527954995 Q9NVP2 ASF1B Q9NVP2.T179.p_ASF1B Q9NVP2_T179t _1_1_179_179 Q9NVP2 Q9NVP2|K7ES22 Histone chaperone ASF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30418.30418.4 17.67 16.36 3.719 3 1 1 0 1127.5484 4427.1987 T179t TMT10 149 (R) FHINWDNNMDRLEAIETQDPSLGCGLPLNCtPIK (G) FHINWDNNMDRLEAIET(0.0)QDPS(0.0)LGCGLPLNCT(0.99)PIK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ASF1B 22775.5 4 1 3542.1 48.68 HUMAN 1 0.5809 -27.1946 CGPLEMDSALSVVQN-p Q9Y490;S1052-p CGPLEMDSALSVVQN 0.982795908449026 0.953301324965611 -0.00433333333333335 -0.00666666666666664 0.150080442320153 0.295145893150117 -0.00433333333333336 -0.00666666666666662 0.966032985450377 0.934297981727918 -0.0445905076357823 -0.0863360303475406 Q9Y490 TLN1 Q9Y490.S1052.p_TLN1 Q9Y490_S1052s _1_1_1052_1052 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32307.32307.3 15.17 15.81 1.429 2 1 1 0 976.4786 2847.4633 S1052s TMT10 1041 (K) AQEACGPLEMDsALSVVQNLEK (D) AQEACGPLEMDS(0.99)ALS(0.0)VVQNLEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TLN1 271930.4 2 11 267.1 395.2 HUMAN 1 -0.1501 -0.2951 CGQVFEKSPLRVKNF-p Q02543;S71-p CGQVFEKSPLRVKNF 0.541548546139554 0.864490129744977 -0.172333333333333 -0.024 4.91361168717011 0.891759730407387 -0.172333333333333 -0.024 0.322581035202551 0.814374238499617 -1.08820295505953 -0.246478747163304 Q02543 RPL18A Q02543.S71.p_RPL18A Q02543_S71s _1_1_71_71 Q02543 Q02543|M0R117|M0R1A7|M0R0P7 60S ribosomal protein L18a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19873.19873.3 19.7 17.29 7.67 4 1 1 0 865.442 2514.3427 S71s TMT10 57 (K) SSGEIVYCGQVFEKsPLR (V) S(0.0)S(0.0)GEIVY(0.0)CGQVFEKS(0.99)PLR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RPL18A 21047.3 18 3 1623.1 126.57 HUMAN 1 -4.9136 -0.8918 CGRLQIMSLENLSIE-p Q9NWL6;S631-p CGRLQIMSLENLSIE 0.830364356065644 0.113133624813295 -0.0446666666666667 -0.168 1.55482400458588 12.4825923907611 -0.0446666666666666 -0.168 0.699065065409458 0.0564599853242445 -0.407790697810663 -2.41697383320277 Q9NWL6 ASNSD1 Q9NWL6.S631.p_ASNSD1 Q9NWL6_S631s _1_1_631_631 Q9NWL6 Q9NWL6|U3KQK8 Asparagine synthetase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.32538.32538.3 15.26 15.26 3.763 2 1 1 0 686.0452 1976.1502 S631s TMT10 627 (R) LQIMsLENLSIEK (E) LQIMS(0.99)LENLS(0.0)IEK K:TMT10,s:Phosphorylated S ASNSD1 72877.3 1 2 4800.1 26.46 HUMAN 1 -1.5548 -12.4826 CGSLDKTSPEMSNSN-p Q5UIP0;S1162-p CGSLDKTSPEMSNSN 0.812940652592886 0.113794179776439 0.0373333333333333 -0.173333333333333 1.72926807008172 12.4474731244523 0.0373333333333333 -0.173333333333333 0.671542020442492 0.0569184005465488 0.447975251324217 -2.41070871130662 Q5UIP0 RIF1 Q5UIP0.S1162.p_RIF1 Q5UIP0_S1162s _1_1_1162_1162 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10749.10749.3 13.48 10.54 1.488 8 1 1 0 1137.5012 3330.5214 S1162s TMT10 1148 (K) SSLSNNECGSLDKTsPEMSNSNNDER (K) S(0.0)S(0.0)LS(0.0)NNECGS(0.0)LDKT(0.0)S(0.99)PEMS(0.0)NS(0.0)NNDER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RIF1 276628.8 6 9 29.1 922.06 HUMAN 1 1.7293 -12.4475 CGTVRFDSPESAEKA-p A0A0A0MQW0;S547-p CGTVRFDSPESAEKA 0.891449487774523 0.0104679227872567 -0.0276666666666667 0.46 0.97483696703221 27.7767712587959 -0.0276666666666667 0.46 0.798943933242508 0.00166848718024955 -0.267554580691129 5.7749299895679 A0A0A0MQW0 NotFound A0A0A0MQW0.S547.p_NotFound A0A0A0MQW0_S547s _1_1_547_547 A0A0A0MQW0 Q9P2K5|A0A0A0MR39|Q9P2K5-2|A0A0A0MQW0|A0A087WUT0|A0A0C4DGV1 Myelin expression factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11044.11044.3 12.28 7.7 2.533 3 1 1 0 726.681 2098.0639 S547s TMT10 539 (K) GCGTVRFDsPESAEK (A) GCGT(0.0)VRFDS(0.99)PES(0.0)AEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MYEF2 62184.4 3 7 670.1 249.19 HUMAN 1 -0.9748 27.7768 CGVNDDESPSKIFMV-p Q8NG08;S1048-p CGVNDDESPSKIFMV 0.942064072552451 0.00168485880492474 -0.0156666666666667 -0.835666666666667 0.510281277740163 44.05984158562 -0.0156666666666667 -0.835666666666667 0.889143529195851 3.92659257879169e-05 -0.1460832778643 -12.1173014397639 Q8NG08 HELB Q8NG08.S1048.p_HELB Q8NG08_S1048s _1_1_1048_1048 Q8NG08 Q8NG08 DNA helicase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7435.7435.3 11.47 11.47 4.729 3 1 1 0 616.2822 1766.8631 S1048s TMT10 1040 (R) TCGVNDDEsPSK (I) T(0.0)CGVNDDES(0.99)PS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HELB 124961.8 2 4 2553.1 78.8 HUMAN 1 -0.5103 -44.0598 CGVVKFESPEVAERA-p P52272;S701-p CGVVKFESPEVAERA 0.379722690942504 0.0529759264395193 -0.130666666666667 0.269 7.76796651053708 17.0178776598662 -0.130666666666667 0.269 0.167187324936028 0.0198706573306999 -1.59488140044622 3.26366664145079 P52272 HNRNPM P52272.S701.p_HNRNPM P52272_S701s _1_1_701_701 P52272 P52272|A0A087X0X3|P52272-2 Heterogeneous nuclear ribonucleoprotein M HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12127.12127.2 7.82 7.82 99 1 1 1 0 686.8221 1292.6684 S701s TMT10 699 (K) FEsPEVAER (A) FES(1.0)PEVAER s:Phosphorylated S HNRNPM 77799.7 1 13 830.1 216.57 HUMAN 1 -7.768 17.0179 CHDNGRASPPPPPAF-p Q8NDL9;S539-p CHDNGRASPPPPPAF 0.398511503124105 0.856030800980723 0.120333333333333 -0.0226666666666666 7.37403436542975 0.952267495881971 0.120333333333333 -0.0226666666666666 0.1830613089787 0.803106702485066 1.52634006004848 -0.261836372837709 Q8NDL9 AGBL5 Q8NDL9.S539.p_AGBL5 Q8NDL9_S539s _1_1_539_539 Q8NDL9 Q8NDL9|Q8NDL9-2|Q8NDL9-3 Cytosolic carboxypeptidase-like protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12966.13002.4 19.51 15.85 3.32 4 1 1 0 752.8649 2928.4736 S539s TMT10 524 (R) SVNSIPAACHDNGRAsPPPPPAFPSR (Y) S(0.0)VNS(0.0)IPAACHDNGRAS(0.99)PPPPPAFPS(0.0)R C:Carbamidomethylation,s:Phosphorylated S AGBL5 98730.3 1 1 3996.1 39.47 HUMAN 1 7.374 -0.9523 CHEHLMQYGKGKSCY-p O15516;Y331-p CHEHLMQYGKGKSCY 0.168851864469139 0.048382863326856 -0.323666666666667 0.243333333333333 15.4060613651238 17.5887742710646 -0.323666666666667 0.243333333333333 0.0288000912308172 0.0174229854079356 -2.95496095204592 3.37682875745215 O15516 CLOCK O15516.Y331.p_CLOCK O15516_Y331y _1_1_331_331 O15516 O15516 Circadian locomoter output cycles protein kaput GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8154.8197.3 22.72 22.72 99 1 1 1 0 614.2917 1760.8977 Y331y TMT10 324 (K) CHEHLMQyGK (G) CHEHLMQY(1.0)GK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y CLOCK 95815.6 4 1 147.1 22.72 HUMAN 1 -15.4061 17.5888 CHKSAPTSPTATNIS-p Q9H792;S572-p CHKSAPTSPTATNIS 0.213141082340626 0.0268584189891589 -0.22 -0.306666666666667 12.9533454974065 21.3235827310478 -0.22 -0.306666666666667 0.0506600308892168 0.00737295743875063 -2.50266342059542 -4.16470965397611 Q9H792 PEAK1 Q9H792.S572.p_PEAK1 Q9H792_S572s _1_1_572_572 Q9H792 Q9H792|H0YN99 Pseudopodium-enriched atypical kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10857.10857.2 11.28 11.28 1.106 7 1 1 0 950.4929 1820.0166 S572s TMT10 568 (K) SAPTsPTATNISSK (T) S(0.0)APT(0.0)S(0.99)PT(0.0)AT(0.0)NIS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S PEAK1 195156.9 2 4 583.1 265.81 HUMAN 1 -12.9533 -21.3236 CHQEKRKTINGEDIL-p P25208;T112-p CHQEKRKTINGEDIL 0.574983174915437 0.271714555945843 0.079 0.187333333333333 4.41951262117554 7.45362260653413 0.079 0.187333333333333 0.361450423458458 0.17973710378123 0.996517402841399 1.53975340194976 P25208 NFYB P25208.T112.p_NFYB P25208_T112t _1_1_112_112 P25208 P25208 Nuclear transcription factor Y subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37027.37027.4 24.63 20.7 12.227 5 1 1 0 928.7474 3632.0013 T112t TMT10 110 (K) RKtINGEDILFAMSTLGFDSYVEPLK (L) RKT(0.99)INGEDILFAMS(0.0)T(0.0)LGFDS(0.0)Y(0.0)VEPLK K:TMT10,t:Phosphorylated T NFYB 23002 3 1 4962.1 24.63 HUMAN 1 4.4195 7.4536 CHSELVPSP______-p Q96N19-4;S474-p CHSELVPSP______ 0.971512397285955 0.751890378356644 -0.00866666666666667 -0.065 0.244970615773481 1.7109359167006 -0.00866666666666663 -0.065 0.945154787306326 0.674382680691764 -0.0720440471735047 -0.443741623182477 Q96N19 GPR137 Q96N19.4.S474.p_GPR137 Q96N19-4_S474s _1_1_474_474 Q96N19-4 Q96N19-4 Isoform 4 of Integral membrane protein GPR137 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31839.31839.3 13.79 13.79 7.125 4 1 1 0 912.7463 2656.256 S474s TMT10 455 (R) GYPLLWPAPCCSCHSELVPsP (-) GY(0.0)PLLWPAPCCS(0.0)CHS(0.0)ELVPS(0.99)P C:Carbamidomethylation,s:Phosphorylated S GPR137 53399.2 1 1 6125.1 13.79 HUMAN 1 -0.245 -1.7109 CHTPKKNSIHELLLE-p F5H527;S811-p CHTPKKNSIHELLLE 0.454134851316274 0.0206741666257125 -0.0993333333333333 0.332 6.32501139331599 23.0511145576494 -0.0993333333333334 0.332 0.233076700072192 0.00495323056574253 -1.3422617408011 4.56139785346391 F5H527 SSH2 F5H527.S811.p_SSH2 F5H527_S811s _1_1_811_811 F5H527 F5H527|Q76I76 Protein phosphatase Slingshot homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15638.15638.3 12.26 12.26 99 1 1 1 0 630.6933 1810.0951 S811s TMT10 809 (K) KNsIHELLLER (A) KNS(1.0)IHELLLER K:TMT10,s:Phosphorylated S SSH2 162969.8 2 5 998.1 190.13 HUMAN 1 -6.325 23.0511 CHTRKTASWLAAELS-p H3BQK0;S352-p CHTRKTASWLAAELS 0.125507245870901 0.495641087614304 -0.307666666666667 0.079 18.7490022286719 4.07661351063502 -0.307666666666667 0.079 0.0133382783769258 0.391145779867246 -3.61546721880933 0.931586279085404 H3BQK0 DDX19B H3BQK0.S352.p_DDX19B H3BQK0_S352s _1_1_352_352 H3BQK0 H3BQK0|Q9UMR2|F6QDS0|Q9NUU7|Q9UMR2-4|Q9UMR2-2 ATP-dependent RNA helicase DDX19B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24501.24501.3 11.71 7.91 1.542 3 1 1 0 691.397 1992.2097 S352s TMT10 349 (R) KTAsWLAAELSK (E) KT(0.0)AS(0.99)WLAAELS(0.0)K K:TMT10,s:Phosphorylated S DDX19B 54955.2 2 3 3616.1 46.87 HUMAN 1 -18.749 4.0766 CHVHLKKSLSGSPLK-p Q9UIG0;S345-p CHVHLKKSLSGSPLK 0.244820714159991 0.838699280813853 -0.552666666666667 -0.0353333333333333 11.6885895832103 1.07415169246407 -0.552666666666667 -0.0346455601974913 0.0677861614522545 0.780880954741343 -2.2772177482753 -0.292347459617601 Q9UIG0 BAZ1B Q9UIG0.S345.p_BAZ1B Q9UIG0_S345s _1_1_345_345 Q9UIG0 Q9UIG0|Q9UIG0-2 Tyrosine-protein kinase BAZ1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14995.14995.2 9.14 2.75 3.268 3 1 1 0 663.8752 1246.7771 S345s TMT10 345 (K) sLSGSPLK (V) S(0.99)LS(0.0)GS(0.0)PLK K:TMT10,s:Phosphorylated S BAZ1B 172497.3 1 6 370.1 339.44 HUMAN 1 -11.6886 -1.0742 CHWALRESQGQDESV-p Q9P296;S314-p CHWALRESQGQDESV 0.170911150358501 0.0598074928632794 0.344 0.574 15.305313881781 16.2974482285173 0.344 0.574 0.0294760043417858 0.0234560661177554 2.93591161156759 3.12325589028957 Q9P296 C5AR2 Q9P296.S314.p_C5AR2 Q9P296_S314sS320s_2_2_314_320 Q9P296 Q9P296 C5a anaphylatoxin chemotactic receptor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16175.16175.5 14.24 14.24 4.072 4 2 2 0 710.1459 3386.773 S314s S320s TMT10 302 (R) SLPAACHWALREsQGQDEsVDSKK (S) S(0.0)LPAACHWALRES(0.99)QGQDES(0.99)VDS(0.0)KK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C5AR2 36935.5 1 2 4662.1 28.28 HUMAN 1 15.3053 16.2974 CIAGSPLTPRRVTEV-p Q08999;T642-p CIAGSPLTPRRVTEV 0.708773693437448 0.0317197275628693 0.097 0.599333333333333 2.80937188893911 20.2376596796985 0.097 0.599333333333333 0.523676169302402 0.00946747205796739 0.681420289018182 3.92641138274035 Q08999 RBL2 Q08999.T642.p_RBL2 Q08999_T642t _1_1_642_642 Q08999 Q08999 Retinoblastoma-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20305.20305.2 15.91 11.26 1.185 2 1 1 0 904.9484 1728.9152 T642t TMT10 631 (R) ADEICIAGSPLtPR (R) ADEICIAGS(0.0)PLT(0.99)PR C:Carbamidomethylation,t:Phosphorylated T RBL2 129790.7 2 6 408.1 323.79 HUMAN 1 2.8094 20.2377 CIAHSRSSMEMEGIF-p O75962;S1724-p CIAHSRSSMEMEGIF 0.293942250620987 0.362229481289707 -0.163 0.095 10.0344375483236 5.85063521687409 -0.163 0.095 0.0992101817315916 0.259977928100308 -1.98769408239698 1.25761719107759 O75962 TRIO O75962.S1724.p_TRIO O75962_S1724s _1_1_1724_1724 O75962 O75962|O75962-4|O75962-2|O75962-5|E7EWP2 Triple functional domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19825.19825.3 16.39 16.39 1.173 2 1 1 0 649.9762 1867.9447 S1724s TMT10 1723 (R) SsMEMEGIFNHK (D) S(0.0)S(0.99)MEMEGIFNHK K:TMT10,s:Phosphorylated S TRIO 349974.9 6 8 450.1 308.79 HUMAN 1 -10.0344 5.8506 CIELCCGSVKEMRER-p P05023-4;S466-p CIELCCGSVKEMRER 0.899853160329925 0.811823964095005 0.0203333333333333 0.0273333333333333 0.896549440467883 1.26931149649725 0.0203333333333333 0.0273333333333334 0.813476583452928 0.746567105141651 0.247723770683935 0.340097031394495 P05023 ATP1A1 P05023.4.S466.p_ATP1A1 P05023-4_S466s _1_1_466_466 P05023-4 P05023|P05023-4|P05023-3|P05023-2 Isoform 4 of Sodium/potassium-transporting ATPase subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17743.17743.3 13.15 10.91 99 1 1 1 0 588.6155 1683.8632 S466s TMT10 459 (K) CIELCCGsVK (E) CIELCCGS(1.0)VK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATP1A1 114310.4 1 6 1313.1 155.17 HUMAN 1 0.8965 1.2693 CIERLSASPAQEKEA-p Q9Y2F5;S516-p CIERLSASPAQEKEA 0.922345826324192 0.0084172293346623 -0.023 -0.638 0.687758220456964 29.4649849233425 -0.023 -0.638 0.853540588429369 0.00113110131597755 -0.193611183703343 -6.26128898595794 Q9Y2F5 ICE1 Q9Y2F5.S516.p_ICE1 Q9Y2F5_S516s _1_1_516_516 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10619.10619.2 12.62 7.12 2.526 2 1 1 0 734.8942 1388.815 S516s TMT10 513 (R) LSAsPAQEK (E) LS(0.0)AS(0.99)PAQEK K:TMT10,s:Phosphorylated S ICE1 250910.2 2 3 216.1 433.09 HUMAN 1 -0.6878 -29.465 CIFPEELSPKRMDTE-p Q86YC2;S660-p CIFPEELSPKRMDTE 0.695203876254076 0.0326911997547265 0.056 -0.328666666666667 2.96384825394402 20.0453154138013 0.056 -0.328666666666667 0.505376652719653 0.00989619988413503 0.713059858477511 -3.88503639098223 Q86YC2 PALB2 Q86YC2.S660.p_PALB2 Q86YC2_S660s _1_1_660_660 Q86YC2 Q86YC2|H3BN63 Partner and localizer of BRCA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22488.22488.2 16.2 16.2 8.62 2 1 1 0 1016.0002 1951.0247 S660s TMT10 650 (K) EGSCIFPEELsPK (R) EGS(0.0)CIFPEELS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PALB2 133061.7 6 9 934.1 198.86 HUMAN 1 2.9638 -20.0453 CILKHWNSFDTQTLK-p Q68D85;S307-p CILKHWNSFDTQTLK 0.90552186362789 0.293195154318822 -0.0223333333333333 0.15 0.848628732551424 7.03394203566236 -0.0223333333333333 0.15 0.822502310764912 0.197972923501722 -0.235465309512866 1.46654614380193 Q68D85 NCR3LG1 Q68D85.S307.p_NCR3LG1 Q68D85_S307s _1_1_307_307 Q68D85 Q68D85 Natural cytotoxicity triggering receptor 3 ligand 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16528.16528.4 18.13 18.13 4.512 3 1 1 0 568.808 2192.2431 S307s TMT10 304 (K) HWNsFDTQTLKK (E) HWNS(0.99)FDT(0.0)QT(0.0)LKK K:TMT10,s:Phosphorylated S NCR3LG1 51567.9 1 1 3671.1 45.62 HUMAN 1 -0.8486 7.0339 CINAAPDSPSKQLPD-p Q7Z569;S117-p CINAAPDSPSKQLPD 0.208094276358716 0.0219466301321615 -0.226 -0.389 13.1475974584917 22.668690626402 -0.226 -0.389 0.0484440288562773 0.00540917381932094 -2.53769752647333 -4.4716249763618 Q7Z569 BRAP Q7Z569.S117.p_BRAP Q7Z569_S117s _1_1_117_117 Q7Z569 Q7Z569|J3KNN7 BRCA1-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10367.10367.2 16.46 16.46 3.068 2 1 1 0 913.9412 1746.9097 S117s TMT10 109 (K) ECINAAPDsPSK (Q) ECINAAPDS(0.99)PS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRAP 68615.7 6 5 1332.1 153 HUMAN 1 -13.1476 -22.6687 CINPLNGSVCERPAN-p O75882;S916-p CINPLNGSVCERPAN 0.831749130851232 0.00978827117070836 0.0363333333333333 -0.423333333333333 1.54222431509081 28.2809394171895 0.0363333333333333 -0.423333333333333 0.701096127815138 0.00148561425608945 0.404855895504314 -5.91699551679809 O75882 ATRN O75882.S916.p_ATRN O75882_S916s_1_1_916_916 O75882 O75882|O75882-2 Attractin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9532.9532.3 7.08 7.08 3.263 3 1 1 0 1068.8821 3123.6556 N914n S916s Hydrogen 903 (R) GLKAATCINPLnGsVCERPANHSAK (Q) GLKAAT(0.0)CIN(0.0)PLN(0.99)GS(0.99)VCERPAN(0.0)HS(0.0)AK K:TMT10-Lys-Only,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S ATRN 163554.9 1 1 5024.1 23.79 HUMAN 1 1.5422 -28.2809 CIPTAGMSPSRSNTI-p Q13480-2;S381-p CIPTAGMSPSRSNTI 0.390105099545893 0.177169515262384 -0.126333333333333 -0.306666666666667 7.56072805525853 9.88629765552085 -0.126333333333333 -0.306666666666667 0.175358650434716 0.102652666354702 -1.55885181721857 -1.96118013893495 Q13480 GAB1 Q13480.2.S381.p_GAB1 Q13480-2_S381s _1_1_381_381 Q13480-2 Q13480-2|B7Z3B9 Isoform 2 of GRB2-associated-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15516.15516.3 21.87 21.87 1.332 9 1 1 0 805.0152 2333.0587 S381s TMT10 365 (R) TASDTDSSYCIPTAGMsPSR (S) T(0.0)AS(0.0)DT(0.0)DS(0.0)S(0.0)Y(0.0)CIPT(0.0)AGMS(0.99)PS(0.0)R C:Carbamidomethylation,s:Phosphorylated S GAB1 80631.3 7 9 368.1 340.82 HUMAN 1 -7.5607 -9.8863 CIPTLIGTPVKIGEG-p Q9H0H5;T342-p CIPTLIGTPVKIGEG 0.3628557333861 0.299705348597059 -0.313 -0.262 8.17960040597559 6.90815731127871 -0.313 -0.262 0.152068744163228 0.20379065673675 -1.66630289843776 -1.44453301210148 Q9H0H5 RACGAP1 Q9H0H5.T342.p_RACGAP1 Q9H0H5_T342t _1_1_342_342 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29485.29485.3 14.51 14.51 3.414 2 1 1 0 659.0168 1895.0696 T342t Hydrogen 331 (R) CPLPCIPTLIGtPVK (I) CPLPCIPT(0.0)LIGT(0.99)PVK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T RACGAP1 71709.9 5 12 574.1 268.64 HUMAN 1 -8.1796 -6.9082 CKAGIIASARAGETR-p P13639;S48-p CKAGIIASARAGETR 0.553351972574002 0.362727963993222 0.084 -0.112666666666667 4.74448147259468 5.83988076547632 0.084 -0.112666666666667 0.335391346226403 0.260622510231095 1.0570179119801 -1.25569537148343 P13639 EEF2 P13639.S48.p_EEF2 P13639_S48s _1_1_48_48 P13639 P13639 Elongation factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10095.10095.2 10.47 6.22 99 1 1 1 0 534.2946 987.6148 S48s TMT10 43 (K) AGIIAsAR (A) AGIIAS(1.0)AR s:Phosphorylated S EEF2 96306.4 2 2 693.1 242.75 HUMAN 1 4.7445 -5.8399 CKAKPVGSPLFKFSD-p Q92576;S283-p CKAKPVGSPLFKFSD 0.716278239111013 0.294739594147816 -0.063 0.117333333333333 2.73354449657518 7.00549300504505 -0.063 0.117333333333333 0.532899791526581 0.199274028022431 -0.665752329597783 1.46157058426945 Q92576 PHF3 Q92576.S283.p_PHF3 Q92576_S283s _1_1_283_283 Q92576 Q92576|Q92576-2|D6R9X2 PHD finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17813.17813.3 13.96 13.96 99 1 1 1 0 604.3649 1731.1136 S283s TMT10 278 (K) AKPVGsPLFK (F) AKPVGS(1.0)PLFK K:TMT10,s:Phosphorylated S PHF3 231702.4 5 3 96.1 606.54 HUMAN 1 -2.7335 7.0055 CKATEDASDLNDDDN-p A0A0C4DFM7;S883-p CKATEDASDLNDDDN 0.464832976865297 0.0345990051514378 -0.109333333333333 0.278666666666667 6.13950455795085 19.6788662518773 -0.109333333333333 0.278666666666667 0.243248149012066 0.0107674626710413 -1.30937730587878 3.80687857507454 A0A0C4DFM7 ZCCHC11 A0A0C4DFM7.S883.p_ZCCHC11 A0A0C4DFM7_S883s _1_1_883_883 A0A0C4DFM7 A0A0C4DFM7|Q5TAX3 Terminal uridylyltransferase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34635.34635.3 17.84 17.29 2.501 5 1 1 0 1143.8656 3349.6 S883s TMT10 878 (K) ATEDAsDLNDDDNLPTQELYYVFDK (F) AT(0.0)EDAS(0.99)DLNDDDNLPT(0.0)QELY(0.0)Y(0.0)VFDK K:TMT10,s:Phosphorylated S ZCCHC11 188216.3 2 9 850.1 212.61 HUMAN 1 -6.1395 19.6789 CKDPYGGSEGTFSSR-p Q8N4S9;S140-p CKDPYGGSEGTFSSR 0.346276230374682 0.081763098165722 0.16 -0.325333333333333 8.55767985579209 14.4148170205706 0.16 -0.325333333333333 0.139390127205157 0.0361841435721123 1.73179372570153 -2.76768278854674 Q8N4S9 MARVELD2 Q8N4S9.S140.p_MARVELD2 Q8N4S9_S140s _1_1_140_140 Q8N4S9 Q8N4S9|Q8N4S9-3|Q8N4S9-2|A1BQX2|A0A0G2JQ38 MARVEL domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14056.14056.3 14.56 9.83 2.118 7 1 1 0 895.4188 2604.2764 S140s TMT10 128 (R) SPLNSCKDPYGGsEGTFSSR (K) S(0.0)PLNS(0.0)CKDPY(0.0)GGS(0.99)EGT(0.0)FS(0.0)S(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MARVELD2 64623.4 1 5 1043.1 184.85 HUMAN 1 8.5577 -14.4148 CKDTQIVSDAEVIQE-p Q8IZD2;S623-p CKDTQIVSDAEVIQE 0.634663070490488 0.022888536732408 -0.112 -0.415333333333333 3.67874652795457 22.394065817014 -0.112 -0.415333333333333 0.428672227039014 0.00576226753668556 -0.855201008438676 -4.40785934692371 Q8IZD2 KMT2E Q8IZD2.S623.p_KMT2E Q8IZD2_S623s _1_1_623_623 Q8IZD2 Q8IZD2|Q8IZD2-7|Q8IZD2-2|Q8IZD2-5|Q8IZD2-6|Q8IZD2-8|Q8IZD2-4 Histone-lysine N-methyltransferase 2E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20871.20871.5 23.62 24.78 4.085 4 1 1 0 785.424 3843.1157 S623s TMT10 618 (K) DTQIVsDAEVIQEQAKEENASKPTPAK (V) DT(0.0)QIVS(0.99)DAEVIQEQAKEENAS(0.0)KPT(0.0)PAK K:TMT10,s:Phosphorylated S KMT2E 207015.2 3 2 544.1 275.86 HUMAN 1 -3.6787 -22.3941 CKDWFHGSCVGVEEE-p O75151;S33-p CKDWFHGSCVGVEEE 0.893219546514556 0.454746932176607 0.0236666666666667 0.1 0.959599559703093 4.56284275803469 0.0236666666666666 0.1 0.801751985349745 0.349716178643306 0.263713473218406 1.02310885930662 O75151 PHF2 O75151.S33.p_PHF2 O75151_S33s _1_1_33_33 O75151 O75151|A0A087WW48|E7ET14 Lysine-specific demethylase PHF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23274.23274.4 9.91 9.91 5.712 2 1 1 0 983.425 3850.7188 S33s TMT10 28 (K) DWFHGsCVGVEEEEAPDIDIYHCPNCEK (T) DWFHGS(0.99)CVGVEEEEAPDIDIY(0.0)HCPNCEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PHF2 121742.7 1 1 376.2 336.84 HUMAN 1 0.9596 4.5628 CKEPVANSRESSPLP-p Q9HCE3;S294-p CKEPVANSRESSPLP 0.170911150358501 0.127949246266623 0.228666666666667 0.286666666666667 15.3029507879711 11.7734420556739 0.228666666666667 0.286666666666667 0.0294920472619812 0.0664746094466069 2.9354653312044 2.2910949793266 Q9HCE3 ZNF532 Q9HCE3.S294.p_ZNF532 Q9HCE3_S294s _1_1_294_294 Q9HCE3 Q9HCE3 Zinc finger protein 532 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5094.5094.3 12.4 12.4 12.397 3 1 1 0 677.3311 1950.0115 S294s TMT10 282 (K) AASDSCKEPVANsR (E) AAS(0.0)DS(0.0)CKEPVANS(0.99)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF532 144089.8 3 1 397.1 329.01 HUMAN 1 15.303 11.7734 CKGDPRNSAKLDADY-p O43583;S20-p CKGDPRNSAKLDADY 0.0335555602958294 0.480683794931975 -0.678 -0.112333333333333 34.3177954651821 4.24602878448642 -0.678 -0.112333333333333 0.000370015956990462 0.376181229501677 -7.86126697463784 -0.963704987974471 O43583 DENR O43583.S20.p_DENR O43583_S20s _1_1_20_20 O43583 O43583|F8VVL1 Density-regulated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12479.12479.4 11.46 7.91 10.505 2 1 1 0 582.3046 2246.2294 S20s TMT10 15 (K) GDPRNsAKLDADYPLR (V) GDPRNS(0.99)AKLDADY(0.0)PLR K:TMT10,s:Phosphorylated S DENR 22491 2 2 1681.1 121.37 HUMAN 1 -34.3178 -4.246 CKLAIRESIESEIRR-p P55072;S702-p CKLAIRESIESEIRR 0.779845828140554 0.102688999083295 -0.0413333333333334 -0.197666666666667 2.07569943582893 13.0557823140479 -0.0413333333333334 -0.197666666666667 0.620054775138624 0.0494790973984099 -0.52550171708259 -2.51973389304308 P55072 VCP P55072.S702.p_VCP P55072_S702s _1_1_702_702 P55072 P55072 Transitional endoplasmic reticulum ATPase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17648.17924.3 12.97 10.98 3.663 2 1 1 0 575.6434 1644.9482 S702s TMT10 697 (K) LAIREsIESEIR (R) LAIRES(0.99)IES(0.0)EIR s:Phosphorylated S VCP 90004.9 8 11 803.1 222.64 HUMAN 1 -2.0757 -13.0558 CKLGTGFSDEELEEH-p P18858;S801-p CKLGTGFSDEELEEH 0.33341548273698 0.552935067196109 0.149333333333333 0.0636666666666667 8.90490233845212 3.46537318596891 0.149333333333333 0.0636666666666667 0.128679618940808 0.450259289184996 1.79190100529687 0.813323892812406 P18858 LIG1 P18858.S801.p_LIG1 P18858_S801s _1_1_801_801 P18858 P18858 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16376.16376.4 18.72 18.72 3.891 3 1 1 0 649.3202 2514.2877 S801s TMT10 796 (K) LGTGFsDEELEEHHQSLK (A) LGT(0.0)GFS(0.99)DEELEEHHQS(0.0)LK K:TMT10,s:Phosphorylated S LIG1 102361.8 1 15 302.1 376.44 HUMAN 1 8.9049 3.4654 CKLNQHDSPRIKALE-p Q5TB80;S1021-p CKLNQHDSPRIKALE 0.254275357632195 0.784787694861458 0.235 0.047 11.3181691853541 1.45936194882487 0.235 0.0470000000000001 0.0738215367093802 0.7146013052382 2.21194662160095 0.385400802311853 Q5TB80 CEP162 Q5TB80.S1021.p_CEP162 Q5TB80_S1021s _1_1_1021_1021 Q5TB80 Q5TB80|Q5TB80-2 Centrosomal protein of 162 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3948.3948.2 10.46 5.06 99 1 1 1 0 638.3076 1195.6381 S1021s TMT10 1016 (K) LNQHDsPR (I) LNQHDS(1.0)PR s:Phosphorylated S CEP162 162453.6 2 3 3603.1 47.28 HUMAN 1 11.3182 1.4594 CKMSDTGSPGMQRRR-p O60333-2;S1408-p CKMSDTGSPGMQRRR 0.669851136768797 0.628471862860539 -0.063 0.067 3.258737141796 2.74264076733824 -0.063 0.067 0.472200329530634 0.531784804320414 -0.772492159911776 0.667547595967224 O60333 KIF1B O60333.2.S1408.p_KIF1B O60333-2_S1408s _1_1_1408_1408 O60333-2 O60333-4|Q4R9M9|A0A087WWA3|O60333-2 Isoform 2 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6997.6997.2 14.15 14.15 1.124 3 1 1 0 738.3148 1395.6558 S1408s TMT10 1403 (K) MSDTGsPGMQR (R) MS(0.0)DT(0.0)GS(0.99)PGMQR s:Phosphorylated S KIF1B 200628.3 9 7 606.1 262.24 HUMAN 1 -3.2587 2.7426 CKNVLDVSCRKTGLK-p Q8NCD3;S347-p CKNVLDVSCRKTGLK 0.369805323847201 0.00352917669002825 0.122333333333333 -0.623 8.01204063811625 36.6292018654805 0.122333333333333 -0.623 0.158050522599766 0.000217310050863608 1.6372492834562 -8.71377593593431 Q8NCD3 HJURP Q8NCD3.S347.p_HJURP Q8NCD3_S347s _1_1_347_347 Q8NCD3 Q8NCD3|Q8NCD3-2|Q8NCD3-3 Holliday junction recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11979.11979.3 9.5 4.81 99 1 1 1 0 543.6248 1548.8932 S347s TMT10 342 (K) NVLDVsCRK (T) NVLDVS(1.0)CRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HJURP 84336.4 2 5 596.1 263.83 HUMAN 1 8.012 -36.6292 CKSDLKKYRCNVENL-p Q92896-2;Y383-p CKSDLKKYRCNVENL 0.361753568197081 0.645869155451576 0.182333333333333 -0.087 8.20381102823971 2.58816107191961 0.182333333333333 -0.087 0.15122336482088 0.5510409736532 1.67049905734767 -0.635363290816609 Q92896 GLG1 Q92896.2.Y383.p_GLG1 Q92896-2_Y383y _1_1_383_383 Q92896-2 Q92896-2|Q92896-3|H3BM42 Isoform 2 of Golgi apparatus protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.9085.9085.3 14.14 7.66 99 1 1 1 0 543.9307 1549.8107 Y383y TMT10 383 (K) yRCNVENLPR (S) Y(1.0)RCNVENLPR C:Carbamidomethylation,y:Phosphorylated Y GLG1 141099.2 2 1 250.1 14.14 HUMAN 1 8.2038 -2.5882 CKSEEPDSITKSISS-p P49792;S2798-p CKSEEPDSITKSISS 0.207422631751664 0.0703455536337006 -0.281 -0.311666666666667 13.1852291073974 15.3293482927877 -0.281 -0.311666666666667 0.0480260743930797 0.0293133309140723 -2.54449841137337 -2.9384826464239 P49792 RANBP2 P49792.S2798.p_RANBP2 P49792_S2798s _1_1_2798_2798 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10464.10464.2 11.49 11.49 2.28 3 1 1 0 772.3871 1463.7994 S2798s TMT10 2793 (K) SEEPDsITK (S) S(0.0)EEPDS(0.99)IT(0.0)K K:TMT10,s:Phosphorylated S RANBP2 362585.9 1 63 9.1 1298.62 HUMAN 1 -13.1852 -15.3293 CKSPPPESMDTPTST-p P46013;S2110-p CKSPPPESMDTPTST 0.528394657237073 0.288509380833101 0.0953333333333333 -0.111 5.12604004993741 7.12241914185722 0.0953333333333333 -0.111 0.307182163625963 0.193980505087169 1.12710622851072 -1.48200883360409 P46013 MKI67 P46013.S2110.p_MKI67 P46013_S2110s_1_1_2110_2110 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10010.10010.3 7.01 7.01 7.011 6 1 1 0 843.7413 2433.2518 S2110s M2111m TMT10 2101 (K) IACKSPPPEsmDTPTSTR (R) IACKS(0.0)PPPES(0.99)M(1.0)DT(0.0)PT(0.0)S(0.0)T(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,m:Oxidized methionine MKI67 360912.4 1 71 5.1 1918.46 HUMAN 1 5.126 -7.1224 CKSPPPESVDTPTST-p P46013;S1136-p CKSPPPESVDTPTST 0.258855999857316 0.104849704441111 0.212666666666667 -0.292666666666667 11.154957402442 12.9391712486831 0.212666666666667 -0.292666666666667 0.0766486058166054 0.0508256422377154 2.18327906653242 -2.49874836270636 P46013 MKI67 P46013.S1136.p_MKI67 P46013_S1136sT1139t_2_2_1136_1139 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14539.14539.4 7.39 7.39 1.141 6 2 2 0 691.348 2602.4365 S1136s T1139t TMT10 1127 (K) IACKSPPPEsVDtPTSTK (Q) IACKS(0.0)PPPES(0.99)VDT(0.99)PT(0.0)S(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T MKI67 360912.4 2 100 5.1 1918.46 HUMAN 1 11.155 -12.9392 CKTADLGSPCKEPHK-p O14513;S459-p CKTADLGSPCKEPHK 0.178441218280072 0.00672527654405397 -0.225 -0.524 14.7847766522008 31.1957575637931 -0.225 -0.524 0.0332293873891718 0.000759318958925399 -2.83818247644702 -6.79301172613215 O14513 NCKAP5 O14513.S459.p_NCKAP5 O14513_S459s _1_1_459_459 O14513 O14513|A0A0A0MS79 Nck-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9086.9086.4 10.78 10.78 2 2 1 1 0 552.543 2127.1835 S459s TMT10 454 (K) TADLGsPCKEPHK (T) T(0.0)ADLGS(0.99)PCKEPHK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NCKAP5 210359.1 1 2 4560.1 29.87 HUMAN 1 -14.7848 -31.1958 CKTWNHFSDNEAERV-p Q99543;S367-p CKTWNHFSDNEAERV 0.31256981829013 0.768029073765523 0.161333333333333 -0.0333333333333333 9.44942683522615 1.58498215924477 0.161333333333333 -0.0333333333333333 0.113516061982016 0.694227453584717 1.88619421091058 -0.414752477310359 Q99543 DNAJC2 Q99543.S367.p_DNAJC2 Q99543_S367s _1_1_367_367 Q99543 Q99543 DnaJ homolog subfamily C member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12392.12392.4 12.58 12.58 3.868 2 1 1 0 568.5303 2191.1296 S367s TMT10 362 (K) TWNHFsDNEAERVK (M) T(0.0)WNHFS(0.99)DNEAERVK K:TMT10,s:Phosphorylated S DNAJC2 72508.6 1 5 2137.1 96.08 HUMAN 1 9.4494 -1.585 CKVVEVGSKIYVDDG-p P14618;S172-p CKVVEVGSKIYVDDG 0.674901867665647 0.179761085936668 -0.0743333333333334 0.147333333333333 3.19855132749714 9.80247632368503 -0.0743333333333334 0.147333333333333 0.478789775196898 0.104653165119688 -0.76045969591302 1.94664364945925 P14618 PKM P14618.S172.p_PKM P14618_S172s _1_1_172_172 P14618 P14618|P14618-2|P14618-3|B4DNK4|H3BQ34 Pyruvate kinase PKM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13143.13143.2 8.33 2.46 99 1 1 1 0 628.3564 1175.74 S172s TMT10 167 (K) VVEVGsK (I) VVEVGS(1.0)K K:TMT10,s:Phosphorylated S PKM 58506.4 1 9 502.1 291.2 HUMAN 1 -3.1986 9.8025 CKYFDTNSEVEEESE-p Q8N108-12;S213-p CKYFDTNSEVEEESE 0.780519381080653 0.0529355983987602 -0.053 0.236666666666667 2.06941050623768 17.0217990558227 -0.053 0.236666666666667 0.620953314201107 0.0198527235206978 -0.524119208803905 3.26443809163322 Q8N108 MIER1 Q8N108.12.S213.p_MIER1 Q8N108-12_S213sS219s_2_2_213_219 Q8N108-12 Q8N108-12|Q8N108-13|Q8N108-15|Q8N108-17|Q8N108-18|Q8N108-14|Q8N108-16|Q8N108-19 Isoform 2 of Mesoderm induction early response protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.26406.26406.3 22.98 20.68 2.15 6 2 2 0 1353.921 3899.8114 S213s S219s TMT10 208 (K) YFDTNsEVEEEsEEDEDYIPSEDWKK (E) Y(0.0)FDT(0.0)NS(0.99)EVEEES(0.99)EEDEDY(0.0)IPS(0.0)EDWKK K:TMT10,s:Phosphorylated S MIER1 63824.4 12 7 1736.1 118.57 HUMAN 1 -2.0694 17.0218 CKYYQKGYCAYGTRC-p Q9H000;Y44-p CKYYQKGYCAYGTRC 0.985727834936659 0.971631221117482 0.0116666666666667 0.014 0.12632857206884 0.176803524127793 0.0116666666666666 0.014 0.971330761448695 0.960107025436493 0.0376315538017284 0.0523728798795254 Q9H000 MKRN2 Q9H000.Y44.p_MKRN2 Q9H000_Y44y _1_1_44_44 Q9H000 Q9H000|C9J494 Probable E3 ubiquitin-protein ligase makorin-2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.6546.6546.2 7.54 1.38 1.164 3 1 1 0 628.7704 1176.5669 Y44y TMT10 43 (K) GyCAYGTR (C) GY(0.99)CAY(0.0)GT(0.0)R C:Carbamidomethylation,y:Phosphorylated Y MKRN2 48308.8 1 1 430.1 7.54 HUMAN 1 0.1263 0.1768 CLAFHDISPQAPTHF-p P49773;S45-p CLAFHDISPQAPTHF 0.564703045643943 0.0463462978252902 0.0776666666666667 0.244333333333333 4.57150915308863 17.8490027025913 0.0776666666666667 0.244333333333333 0.34901901192321 0.0164096655528462 1.02491489120446 3.42899300651951 P49773 HINT1 P49773.S45.p_HINT1 P49773_S45s _1_1_45_45 P49773 P49773|D6RD60|D6RE99|D6REP8 Histidine triad nucleotide-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30360.30360.5 19.84 19.84 3.23 2 1 1 0 744.3925 3637.9605 S45s TMT10 31 (K) IIFEDDRCLAFHDIsPQAPTHFLVIPK (K) IIFEDDRCLAFHDIS(0.99)PQAPT(0.0)HFLVIPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HINT1 13915.8 4 1 4071.1 38.15 HUMAN 1 4.5715 17.849 CLAPRDHSPPSQGSP-p Q18PE1-3;S419-p CLAPRDHSPPSQGSP 0.902738973298693 0.215929113663797 0.0236666666666667 0.224333333333333 0.873493451759064 8.76016083601118 0.0236666666666667 0.224333333333333 0.817806682243918 0.133040514702756 0.241837453098872 1.76622952941118 Q18PE1 DOK7 Q18PE1.3.S419.p_DOK7 Q18PE1-3_S419s _1_1_419_419 Q18PE1-3 Q18PE1-3|Q18PE1-2|A0A1W2PRA3 Isoform 3 of Protein Dok-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8794.8794.3 15.93 9.34 3.699 5 1 1 0 891.0894 2591.2946 S419s TMT10 410 (R) SLCLAPRDHsPPSQGSPGNSAAR (D) S(0.0)LCLAPRDHS(0.99)PPS(0.0)QGS(0.0)PGNS(0.0)AAR C:Carbamidomethylation,s:Phosphorylated S DOK7 64678.5 3 2 4340.1 33.21 HUMAN 1 0.8735 8.7602 CLETEQESILGVIGK-p Q6ZU80;S826-p CLETEQESILGVIGK 0.661350088579494 0.335316404815926 -0.0693333333333333 -0.123666666666667 3.36162229613564 6.29041979231935 -0.0693333333333333 -0.123666666666667 0.461145282719981 0.234940571454531 -0.792951695761581 -1.33580662193293 Q6ZU80 CEP128 Q6ZU80.S826.p_CEP128 Q6ZU80_S826s _1_1_826_826 Q6ZU80 Q6ZU80|Q6ZU80-1 Centrosomal protein of 128 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35937.35937.3 11.94 11.94 3.1 2 1 1 0 895.1427 2603.4366 S826s TMT10 815 (K) DQLLCLETEQEsILGVIGK (E) DQLLCLET(0.0)EQES(0.99)ILGVIGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CEP128 128640.5 1 10 1261.1 161 HUMAN 1 -3.3616 -6.2904 CLGQNLHSPDLARPR-p O15021;S1950-p CLGQNLHSPDLARPR 0.732651492896551 0.11841941774684 -0.0493333333333333 0.179 2.55805289760866 12.2166548773813 -0.0493333333333333 0.179 0.554874427877308 0.0600253239068007 -0.629123941184083 2.3696155495041 O15021 MAST4 O15021.S1950.p_MAST4 O15021_S1950s _1_1_1950_1950 O15021 O15021|J3QT34|O15021-1|E7EWQ5|O15021-3|O15021-2 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20501.20501.3 11.95 11.95 11.952 2 1 1 0 790.7496 2290.2651 S1950s TMT10 1940 (K) LLTCLGQNLHsPDLARPR (C) LLT(0.0)CLGQNLHS(0.99)PDLARPR C:Carbamidomethylation,s:Phosphorylated S MAST4 286597.7 2 13 121.99 549.41 HUMAN 1 -2.5581 12.2167 CLHEDPQSPPPLPAE-p A0A0U1RQE4;S555-p CLHEDPQSPPPLPAE 0.32809450446442 0.307124833546772 -0.147 -0.101333333333333 9.05034286255978 6.77492533963259 -0.147 -0.101333333333333 0.124441636492726 0.210139389418722 -1.81707795787505 -1.42117460560811 A0A0U1RQE4 NotFound A0A0U1RQE4.S555.p_NotFound A0A0U1RQE4_S555s _1_1_555_555 A0A0U1RQE4 A0A0U1RQE4|Q5HYK7|Q5HYK7-2 SH3 domain-containing protein 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21522.21522.4 18.23 18.23 11.441 5 1 1 0 943.4936 3690.9768 S555s TMT10 548 (K) CLHEDPQsPPPLPAEKPIGNTFSTVSGK (L) CLHEDPQS(0.99)PPPLPAEKPIGNT(0.0)FS(0.0)T(0.0)VS(0.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SH3D19 115424.2 2 6 1907.1 107.96 HUMAN 1 -9.0503 -6.7749 CLIATGGTPRSLSAI-p O95831;T263-p CLIATGGTPRSLSAI 0.12782311980828 0.125903891488702 0.291333333333333 0.182 18.5077077432379 11.8664488823988 0.291333333333333 0.182 0.014100328337706 0.0650661502562194 3.56575427739642 2.30753222089242 O95831 AIFM1 O95831.T263.p_AIFM1 O95831_T263t _1_1_263_263 O95831 O95831|O95831-3|O95831-4|O95831-6 Apoptosis-inducing factor 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12649.12649.2 13.82 9.24 3.187 2 1 1 0 677.8408 1274.7088 T263t TMT10 256 (K) CLIATGGtPR (S) CLIAT(0.0)GGT(0.99)PR C:Carbamidomethylation,t:Phosphorylated T AIFM1 67184.7 1 4 1056.1 182.66 HUMAN 1 18.5077 11.8664 CLKLQPLSPVPSDIE-p B7ZM99;S358-p CLKLQPLSPVPSDIE 0.300478673172259 0.145055543075389 0.239333333333333 0.149 9.81336675007607 11.0435695491649 0.239333333333333 0.149 0.104391064207304 0.0786399167523866 1.94930338681962 2.16276460564972 B7ZM99 MTHFD1L B7ZM99.S358.p_MTHFD1L B7ZM99_S358s _1_1_358_358 B7ZM99 B7ZM99|Q6UB35|A0A087WVM4 MTHFD1L protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24449.24449.3 13.24 13.39 5.849 3 1 1 0 654.0172 1880.069 S358s TMT10 354 (K) LQPLsPVPSDIEISR (G) LQPLS(0.99)PVPS(0.0)DIEIS(0.0)R s:Phosphorylated S MTHFD1L 106800 2 3 5226.1 21.55 HUMAN 1 9.8134 11.0436 CLKTEIMSPLYQDEA-p Q8IY81;S584-p CLKTEIMSPLYQDEA 0.177920938276962 0.921063976154992 -0.225 -0.0116666666666666 14.8573052631189 0.501537183132732 -0.225 -0.0116666666666666 0.0326790538263361 0.890935536134275 -2.85173125438244 -0.143688962523544 Q8IY81 FTSJ3 Q8IY81.S584.p_FTSJ3 Q8IY81_S584s _1_1_584_584 Q8IY81 Q8IY81 pre-rRNA processing protein FTSJ3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21957.21957.4 21.43 21.43 1.475 8 1 1 0 1049.2606 4114.0629 S584s TMT10 580 (K) TEIMsPLYQDEAPKGTEASSGTEAATGLEGEEK (D) T(0.0)EIMS(0.99)PLY(0.0)QDEAPKGT(0.0)EAS(0.0)S(0.0)GT(0.0)EAAT(0.0)GLEGEEK K:TMT10,s:Phosphorylated S FTSJ3 96956.1 7 4 631.1 257.01 HUMAN 1 -14.8573 -0.5015 CLLTLRDYNNREKSE-p Q9NPC7;Y150-p CLLTLRDYNNREKSE 0.234733568977743 0.885953774779424 0.207666666666667 0.0143333333333333 12.0689418975092 0.739092482986024 0.207666666666667 0.0143333333333333 0.0621020319391015 0.843511002373118 2.34456893025246 0.207068338982506 Q9NPC7 MYNN Q9NPC7.Y150.p_MYNN Q9NPC7_Y150y _1_1_150_150 Q9NPC7 Q9NPC7|Q9NPC7-2|Q9NPC7-3 Myoneurin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34818.34818.5 7.21 2.13 2.281 9 1 1 0 1055.1058 5191.608 Y150y TMT10 115 (K) MEDFAFIANPSSTEISSITGNIELNQQTCLLTLRDyNNREK (S) MEDFAFIANPS(0.0)S(0.0)T(0.0)EIS(0.0)S(0.0)IT(0.0)GNIELNQQT(0.0)CLLT(0.0)LRDY(0.99)NNREK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y MYNN 70049.9 1 34 394.3 330.8 HUMAN 1 12.0689 0.7391 CLNVLNKSNEGKELL-p Q99471;S56-p CLNVLNKSNEGKELL 0.386605946791176 0.534493341397412 -0.126333333333333 0.061 7.63934713611199 3.66000222529061 -0.126333333333333 0.061 0.17221274385817 0.430526389893334 -1.57252702750855 0.851418511495375 Q99471 PFDN5 Q99471.S56.p_PFDN5 Q99471_S56s _1_1_56_56 Q99471 Q99471 Prefoldin subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16651.16651.3 16.46 16.46 99 1 1 1 0 753.3991 2178.2156 S56s TMT10 48 (K) DCLNVLNKsNEGK (E) DCLNVLNKS(1.0)NEGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PFDN5 17384.9 2 2 4440.1 31.36 HUMAN 1 -7.6393 3.66 CLPQIKLYGPTNFSP-p O75131;Y392-p CLPQIKLYGPTNFSP 0.39245931987608 0.314813872376043 -0.119333333333333 0.136666666666667 7.4915383329904 6.63437963733589 -0.119333333333333 0.136666666666667 0.178174753527216 0.217051122545836 -1.54680924495406 1.39648311633951 O75131 CPNE3 O75131.Y392.p_CPNE3 O75131_Y392y _1_1_392_392 O75131 O75131 Copine-3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.27310.27310.3 21.95 21.95 3.247 3 1 1 0 703.3682 2028.1228 Y392y TMT10 391 (K) LyGPTNFSPIINHVAR (F) LY(0.99)GPT(0.0)NFS(0.0)PIINHVAR y:Phosphorylated Y CPNE3 60985.3 3 1 153.1 21.95 HUMAN 1 -7.4915 6.6344 CLPTSDSSPEPQQPP-p Q9UPN4-2;S417-p CLPTSDSSPEPQQPP 0.743332697084522 0.198008576778493 0.045 0.141666666666667 2.44623666409339 9.25336581667795 0.045 0.141666666666667 0.569346078363632 0.118758148562212 0.605503862528021 1.85154429298141 Q9UPN4 CEP131 Q9UPN4.2.S417.p_CEP131 Q9UPN4-2_S416sS417s_2_2_416_417 Q9UPN4-2 Q9UPN4|Q9UPN4-2|I3L2J8|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24794.24794.4 21.04 21.04 1.341 6 2 2 0 1161.5029 4483.0649 S416s S417s TMT10 410 (R) CLPTSDssPEPQQPPEDRTQDVLAQDAAGDNLEMMAPSR (G) CLPT(0.0)S(0.0)DS(0.99)S(0.99)PEPQQPPEDRT(0.0)QDVLAQDAAGDNLEMMAPS(0.0)R C:Carbamidomethylation,s:Phosphorylated S CEP131 122301.7 2 24 359.1 345.98 HUMAN 1 2.4462 9.2534 CLPTTPGTPDSSDPS-p Q5JR12;T204-p CLPTTPGTPDSSDPS 0.267978150841997 0.131934464649469 -0.448666666666667 0.188666666666667 10.837061938306 11.5949018339232 -0.448666666666667 0.188666666666667 0.0824695844377868 0.0692643585481315 -2.12758776480168 2.25959764607601 Q5JR12 PPM1J Q5JR12.T204.p_PPM1J Q5JR12_T204t _1_1_204_204 Q5JR12 Q5JR12 Protein phosphatase 1J HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.35936.35936.5 28.31 26.72 1.132 10 1 1 0 1019.2962 5012.5062 T204t TMT10 183 (K) DLVEILQDPSPPPLCLPTTPGtPDSSDPSHLLGPQSCWSSQK (E) DLVEILQDPS(0.0)PPPLCLPT(0.0)T(0.0)PGT(0.99)PDS(0.0)S(0.0)DPS(0.0)HLLGPQS(0.0)CWS(0.0)S(0.0)QK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T PPM1J 55517.9 1 5 2032.1 101.56 HUMAN 1 -10.8371 11.5949 CLQCRPPSPPESSVP-p P41002;S754-p CLQCRPPSPPESSVP 0.0891404210042399 0.00105578872948118 -0.332 -1.29333333333333 22.3632703169705 50.6600491222931 -0.332 -1.29333333333333 0.00580327255896807 8.59003805407882e-06 -4.40549799450756 -16.1466467972502 P41002 CCNF P41002.S754.p_CCNF P41002_S754s _1_1_754_754 P41002 P41002 Cyclin-F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12584.12795.3 15.8 10.44 1.179 4 1 1 0 983.1578 2867.4908 S754s TMT10 746 (K) SCLQCRPPsPPESSVPQQQVK (R) S(0.0)CLQCRPPS(0.99)PPES(0.0)S(0.0)VPQQQVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCNF 89464 2 2 2951.1 64.9 HUMAN 1 -22.3633 -50.66 CLRMKLVSPETEASE-p Q12888-2;S998-p CLRMKLVSPETEASE 0.300973278728137 0.00474018699637445 -0.194 0.635666666666667 9.79239372849096 33.9916379709668 -0.194 0.635666666666667 0.104896410507691 0.00039887443580209 -1.94566369559876 7.73027695019959 Q12888 TP53BP1 Q12888.2.S998.p_TP53BP1 Q12888-2_S998s _1_1_998_998 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23003.23003.5 22.12 22.12 1.898 5 1 1 0 732.188 3576.9364 S998s TMT10 996 (K) LVsPETEASEESLQFNLEKPATGERK (N) LVS(0.99)PET(0.0)EAS(0.0)EES(0.0)LQFNLEKPAT(0.0)GERK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 12 42 3.1 2297.07 HUMAN 1 -9.7924 33.9916 CLSKPRLSYNDDVLT-p Q8ND25;S171-p CLSKPRLSYNDDVLT 0.0722495595033206 0.10743514083302 -1.444 0.224666666666667 24.538043049731 12.7951451367969 -1.444 0.224666666666667 0.00351718890924394 0.0525394456668532 -4.92772075261871 2.4728865843421 Q8ND25 ZNRF1 Q8ND25.S171.p_ZNRF1 Q8ND25_S171s _1_1_171_171 Q8ND25 Q8ND25|H3BRB6 E3 ubiquitin-protein ligase ZNRF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17875.17875.3 9.82 2.28 3.156 3 1 1 0 653.6837 1879.0689 S171s TMT10 168 (K) PRLsYNDDVLTK (D) PRLS(0.99)Y(0.0)NDDVLT(0.0)K K:TMT10,s:Phosphorylated S ZNRF1 24295.7 1 3 2742.1 72.13 HUMAN 1 -24.538 12.7951 CLSQQDLSPQLKHSE-p Q86YC2;S64-p CLSQQDLSPQLKHSE 0.85130690297418 0.00983553432674543 0.0283333333333333 -0.481333333333333 1.35300255728645 28.2487526360348 0.0283333333333333 -0.481333333333333 0.732318059470091 0.00149666546088525 0.360222951225969 -5.90784656216158 Q86YC2 PALB2 Q86YC2.S64.p_PALB2 Q86YC2_S64s _1_1_64_64 Q86YC2 Q86YC2 Partner and localizer of BRCA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18648.18648.3 19.44 16.88 1.953 3 1 1 0 886.1017 2576.3278 S64s TMT10 51 (K) TVEEQDCLSQQDLsPQLK (H) T(0.0)VEEQDCLS(0.0)QQDLS(0.99)PQLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PALB2 133061.7 1 1 934.1 198.86 HUMAN 1 1.353 -28.2488 CLSSERMSLPLLAGG-p Q15398;S725-p CLSSERMSLPLLAGG 0.158190426358206 0.0865345945846366 -0.397333333333333 -0.497 16.0665294298713 14.0707344981612 -0.397333333333333 -0.497 0.0247370015918 0.0391675629579817 -3.08097506854995 -2.70428253915317 Q15398 DLGAP5 Q15398.S725.p_DLGAP5 Q15398_S725s _1_1_725_725 Q15398 Q15398|Q15398-3|Q15398-1 Disks large-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29050.29050.4 15.51 15.51 15.514 2 1 1 0 681.8789 2644.5311 S725s TMT10 724 (R) MsLPLLAGGVADDINTNKK (E) MS(0.99)LPLLAGGVADDINT(0.0)NKK K:TMT10,s:Phosphorylated S DLGAP5 95797.9 4 9 355.1 348.78 HUMAN 1 -16.0665 -14.0707 CLVAGLLSPRFVDVQ-p Q8WYP5-2;S563-p CLVAGLLSPRFVDVQ 0.665963549803557 0.0488657288076255 0.063 -0.290333333333333 3.30044205360241 17.5351189916583 0.063 -0.290333333333333 0.467687534538725 0.0176395743342355 0.780801926237686 -3.36611926930114 Q8WYP5 AHCTF1 Q8WYP5.2.S563.p_AHCTF1 Q8WYP5-2_S563s _1_1_563_563 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24274.24479.2 14.86 8.25 99 1 1 1 0 697.8747 1314.7765 S563s TMT10 556 (R) CLVAGLLsPR (F) CLVAGLLS(1.0)PR C:Carbamidomethylation,s:Phosphorylated S AHCTF1 258049.6 4 3 40.1 829.79 HUMAN 1 3.3004 -17.5351 CLVARPPSQKVRPPP-p Q92870-4;S717-p CLVARPPSQKVRPPP 0.933149133752097 0.104286956667605 -0.0143333333333333 -0.190666666666667 0.589845976049403 12.9707129779585 -0.0143333333333334 -0.190666666666667 0.873002329150648 0.0504578454501229 -0.167575105514783 -2.50442051757571 Q92870 APBB2 Q92870.4.S717.p_APBB2 Q92870-4_S717s _1_1_717_717 Q92870-4 Q92870-4|G5E9Y1 Isoform 4 of Amyloid-beta A4 precursor protein-binding family B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10685.10685.3 7.45 7.45 99 1 1 1 0 565.313 1613.9562 S717s TMT10 710 (K) CLVARPPsQK (V) CLVARPPS(1.0)QK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S APBB2 84356.2 1 16 667.1 249.66 HUMAN 1 -0.5898 -12.9707 CLVGEFVSDALLVPD-p P05067;S124-p CLVGEFVSDALLVPD 0.23797684518109 0.0136958594322609 0.198666666666667 0.408333333333333 11.9320034205214 25.8910406611902 0.198666666666667 0.408333333333333 0.0640913851858155 0.00257570389006562 2.32027967984621 5.26616769955909 P05067 APP P05067.S124.p_APP P05067_S124s _1_1_124_124 P05067 P05067|P05067-9|P05067-8|P05067-11|P05067-7|P05067-6|P05067-2 Amyloid-beta A4 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.34147.34147.3 15.44 12.83 99 1 1 1 0 767.4068 2220.235 S124s TMT10 117 (R) CLVGEFVsDALLVPDK (C) CLVGEFVS(1.0)DALLVPDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S APP 87968.7 1 1 5908.1 15.44 HUMAN 1 11.932 25.891 CLVQEPHSAPAVVAA-p F6SS63;S126-p CLVQEPHSAPAVVAA 0.54964531196757 0.425296625308087 0.092 0.0846666666666667 4.79698949879398 4.94125310463064 0.092 0.0846666666666667 0.331360739005749 0.320534432740832 1.06672059242873 1.09306261831672 F6SS63 NotFound F6SS63.S126.p_NotFound F6SS63_S126s _1_1_126_126 F6SS63 Q8N5C8|Q8N5C8-2|F6SS63 TAK1-binding protein 3, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.31178.31178.4 25.77 25.77 7.657 3 1 1 0 991.9802 3884.9414 S126s TMT10 116 (K) QLICLVQEPHsAPAVVAATPNYNPFFMNEQNR (S) Q(0.0)LICLVQEPHS(0.99)APAVVAAT(0.0)PN(0.0)Y(0.0)N(0.0)PFFM(0.0)N(0.0)EQN(0.0)R C:Carbamidomethylation,s:Phosphorylated S TAB3 67485.4 2 3 1606.1 128.05 HUMAN 1 4.797 4.9413 CMHKLGNSCEFRLLS-p P55265-4;S672-p CMHKLGNSCEFRLLS 0.394856068688803 0.893320961514293 -0.163333333333333 -0.0336666666666666 7.44778361498586 0.68727180456141 -0.163333333333333 -0.0336666666666666 0.179978918792324 0.853636191523125 -1.53918982397217 -0.193464574393534 P55265 ADAR P55265.4.S672.p_ADAR P55265-4_S672s _1_1_672_672 P55265-4 P55265-4|P55265-2 Isoform 4 of Double-stranded RNA-specific adenosine deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11871.11871.2 11.28 6.02 99 1 1 1 0 646.2886 1211.604 S672s TMT10 669 (K) LGNsCEFR (L) LGNS(1.0)CEFR C:Carbamidomethylation,s:Phosphorylated S ADAR 142147.5 1 12 584.1 265.43 HUMAN 1 -7.4478 -0.6873 CMKHFKGSVEKLCSV-p Q15833-3;S371-p CMKHFKGSVEKLCSV 0.337362550356468 0.743626534948256 -0.181333333333333 0.042 8.79148390104407 1.7746787026408 -0.181333333333333 0.042 0.132084424990036 0.664556835968157 -1.77226846472302 0.458252839025962 Q15833 STXBP2 Q15833.3.S371.p_STXBP2 Q15833-3_S371s _1_1_371_371 Q15833-3 Q15833-3|Q15833-2 Isoform 3 of Syntaxin-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7701.7720.4 9.13 9.13 99 1 1 1 0 425.4938 1618.9884 S371s TMT10 367 (K) HFKGsVEK (L) HFKGS(1.0)VEK K:TMT10,s:Phosphorylated S STXBP2 68150.2 2 3 3836.1 42.05 HUMAN 1 -8.7915 1.7747 CMRSFTRSANLIRHQ-p Q6U7Q0;S279-p CMRSFTRSANLIRHQ 0.274203367926357 0.0988389516098073 -0.543666666666667 -0.259 10.6382893007652 13.2848386187738 -0.543666666666667 -0.259 0.0863318544612408 0.0469370875533527 -2.09285484606115 -2.56108011131233 Q6U7Q0 ZNF322 Q6U7Q0.S279.p_ZNF322 Q6U7Q0_S279s _1_1_279_279 Q6U7Q0 Q9NP71-5|Q08ER8|Q6U7Q0 Zinc finger protein 322 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12334.12334.2 9.37 1.61 99 1 1 1 0 491.7678 902.5621 S279s TMT10 279 (R) sANLIR (H) S(1.0)ANLIR s:Phosphorylated S ZNF322 48594.4 1 83 240.28 415.72 HUMAN 1 -10.6383 -13.2848 CMTRLSRSRTASLTS-p Q9UN36;S328-p CMTRLSRSRTASLTS 0.989020433252707 0.614604205436038 -0.00266666666666668 0.0583333333333334 0.0987886952778256 2.87348153328168 -0.00266666666666668 0.0583333333333334 0.977509823349893 0.516002548606542 -0.0295176751178999 0.694500554764859 Q9UN36 NDRG2 Q9UN36.S328.p_NDRG2 Q9UN36_S328sT330tS332s_3_3_328_332 Q9UN36 Q9UN36|Q9UN36-6|Q9UN36-3|Q9UN36-2|A0A0A0MS87|Q9UN36-5|Q9UN36-4|G3V578 Protein NDRG2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9146.9146.2 8.68 8.68 2.309 6 3 3 0 916.8527 1592.7987 S328s T330t S332s Hydrogen 328 (R) sRtAsLTSAASVDGNR (S) S(0.99)RT(0.99)AS(0.99)LT(0.0)S(0.0)AAS(0.0)VDGNR s:Phosphorylated S,t:Phosphorylated T NDRG2 41139.8 8 8 2649.1 75.22 HUMAN 1 -0.0988 2.8735 CNHQEGTSSDDELPS-p P16383;S429-p CNHQEGTSSDDELPS 0.887870336785331 0.0962052435679228 0.0203333333333333 -0.237666666666667 1.00527419837475 13.4438165099652 0.0203333333333333 -0.237666666666667 0.793364164952072 0.0452499755630556 0.275200881812314 -2.58987694431096 P16383 GCFC2 P16383.S429.p_GCFC2 P16383_S429sS430s_2_2_429_430 P16383 P16383|P16383-2 GC-rich sequence DNA-binding factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26546.26546.5 12.21 12.21 1.207 5 2 2 0 746.1296 3566.6779 S429s S430s TMT10 417 (R) VLSGNCNHQEGTssDDELPSAEMIDFQK (S) VLS(0.0)GNCNHQEGT(0.0)S(0.99)S(0.99)DDELPS(0.0)AEMIDFQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GCFC2 89953.6 2 7 2330.1 87.66 HUMAN 1 1.0053 -13.4438 CNISERKSPGVEIKS-p Q9Y597;S711-p CNISERKSPGVEIKS 0.253185624491412 0.0967088757620674 -0.204333333333333 -0.236 11.3734018670153 13.4149967315846 -0.204333333333333 -0.236 0.072888634347649 0.0455512528975438 -2.22166030948004 -2.58465038316995 Q9Y597 KCTD3 Q9Y597.S711.p_KCTD3 Q9Y597_S711s _1_1_711_711 Q9Y597 Q9Y597|Q9Y597-2|Q9Y597-3 BTB/POZ domain-containing protein KCTD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11602.11602.3 13.17 8.34 2.395 3 1 1 0 933.8262 2719.5016 S711s TMT10 699 (K) GATGECNISERKsPGVEIK (S) GAT(0.0)GECNIS(0.0)ERKS(0.99)PGVEIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KCTD3 89667 10 9 417.1 320.81 HUMAN 1 -11.3734 -13.415 CNKTLAPSPKSPGDF-p O43683;S593-p CNKTLAPSPKSPGDF 0.485768497509106 0.00235455747545362 -0.175 -1.12866666666667 5.77793940460651 40.3801479037658 -0.175 -1.12866666666667 0.264366279748882 9.16189287756101e-05 -1.24490248325453 -10.3036790403823 O43683 BUB1 O43683.S593.p_BUB1 O43683_S593s _1_1_593_593 O43683 O43683|O43683-3|O43683-2 Mitotic checkpoint serine/threonine-protein kinase BUB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11352.11352.2 9.17 9.17 4.513 2 1 1 0 626.3596 1171.7451 S593s TMT10 589 (K) TLAPsPK (S) T(0.0)LAPS(0.99)PK K:TMT10,s:Phosphorylated S BUB1 123514.1 1 5 1341.1 151.76 HUMAN 1 -5.7779 -40.3801 CNLSRVDSTTCLFPV-p Q06210;S261-p CNLSRVDSTTCLFPV 0.449308497040531 0.485242432384238 0.106 0.100666666666667 6.41849856424246 4.19396458830215 0.106 0.100666666666667 0.228113056441058 0.380718114683925 1.35878909618795 0.953861866444593 Q06210 GFPT1 Q06210.S261.p_GFPT1 Q06210_S261s _1_1_261_261 Q06210 Q06210|Q06210-2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19096.19096.3 13.55 9.9 1.111 5 1 1 0 1065.5467 3114.6531 S261s TMT10 251 (K) KGSCNLSRVDsTTCLFPVEEK (A) KGS(0.0)CNLS(0.0)RVDS(0.99)T(0.0)T(0.0)CLFPVEEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GFPT1 79603.8 24 3 1792.1 114.51 HUMAN 1 6.4185 4.194 CNPSEAASEESNSEI-p Q9NR30;S168-p CNPSEAASEESNSEI 0.696853109927181 0.638798346147228 -0.0613333333333333 -0.0486666666666667 2.9471712364263 2.65124805910542 -0.0613333333333334 -0.0486666666666667 0.507321042662032 0.543094236690737 -0.709661603843837 -0.648555689640559 Q9NR30 DDX21 Q9NR30.S168.p_DDX21 Q9NR30_S168sS171sS173s_3_3_168_173 Q9NR30 Q9NR30|Q9NR30-2 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23564.24182.5 26.08 26.08 5.694 4 3 3 0 973.6387 4623.2764 N152n S168s S171s S173s TMT10 150 (K) LKnGFPHPEPDCNPSEAAsEEsNsEIEQEIPVEQK (E) LKN(0.99)GFPHPEPDCN(0.0)PS(0.0)EAAS(0.99)EES(0.99)N(0.0)S(0.99)EIEQEIPVEQK K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S DDX21 87856.3 37 28 103.1 590.75 HUMAN 1 -2.9472 -2.6512 CNSNLQDSEEDIEPS-p Q9NRY4;S985-p CNSNLQDSEEDIEPS 0.141557816596311 0.241859722768955 0.261333333333333 0.248333333333333 17.353848642475 8.11970081499678 0.261333333333333 0.248333333333333 0.0183914146378887 0.154180666418696 3.33265655329947 1.65538634694375 Q9NRY4 ARHGAP35 Q9NRY4.S985.p_ARHGAP35 Q9NRY4_S985s _1_1_985_985 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28779.28779.4 24.61 24.61 6.795 10 1 1 0 1106.7776 4344.123 S985s TMT10 973 (R) AGSPLCNSNLQDsEEDIEPSYSLFREDTSLPSLSK (D) AGS(0.0)PLCNS(0.0)NLQDS(0.99)EEDIEPS(0.0)Y(0.0)S(0.0)LFREDT(0.0)S(0.0)LPS(0.0)LS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARHGAP35 172051.4 6 6 247.1 410.47 HUMAN 1 17.3538 8.1197 CNTESPVSPLESHSK-p Q5U623;S521-p CNTESPVSPLESHSK 0.934377786071211 0.641848122398554 -0.019 -0.0663333333333333 0.58021215339826 2.62397792941846 -0.019 -0.0663333333333333 0.874941033204431 0.546515151869592 -0.164989145900042 -0.642861531110899 Q5U623 ATF7IP2 Q5U623.S521.p_ATF7IP2 Q5U623_S521s _1_1_521_521 Q5U623 Q5U623|B4DKH3 Activating transcription factor 7-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13942.13942.3 21.8 21.8 1.591 6 1 1 0 904.0967 2630.3132 S521s TMT10 509 (K) EGLSNCNTESPVsPLESHSK (A) EGLS(0.0)NCNT(0.0)ES(0.0)PVS(0.99)PLES(0.0)HS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATF7IP2 76847 1 4 2630.1 76.18 HUMAN 1 -0.5802 -2.624 CNVLHPQSPNNSNRQ-p Q7Z333-4;S1663-p CNVLHPQSPNNSNRQ 0.978428524752418 0.0902486627118673 -0.00433333333333334 -0.185333333333333 0.187865642096211 13.8197745313631 -0.00433333333333334 -0.185333333333333 0.957664603829327 0.0414975585977631 -0.0555882608837358 -2.65831821075278 Q7Z333 SETX Q7Z333.4.S1663.p_SETX Q7Z333-4_S1663s _1_1_1663_1663 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5729.5729.2 13.21 13.21 2.491 3 1 1 0 1073.9872 2066.9988 S1663s TMT10 1654 (K) NSCNVLHPQsPNNSNR (Q) NS(0.0)CNVLHPQS(0.99)PNNS(0.0)NR C:Carbamidomethylation,s:Phosphorylated S SETX 310728.6 4 15 192.1 463.82 HUMAN 1 -0.1879 -13.8198 CPASEQGYEEMRAFQ-p P21860;Y1289-p CPASEQGYEEMRAFQ NA 0.771916017433854 -7.069 -0.515333333333333 NA 1.55546672263 NA -0.515333333333333 NA 0.698961617517408 NA -0.417202295566578 P21860 ERBB3 P21860.Y1289.p_ERBB3 P21860_Y1289y _1_1_1289_1289 P21860 P21860|P21860-4|P21860-5 Receptor tyrosine-protein kinase erbB-3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.17127.17127.3 34.42 34.42 3.905 3 1 1 0 981.395 2862.1967 Y1289y TMT10 1268 (R) DGGGPGGDYAAMGACPASEQGyEEMR (A) DGGGPGGDY(0.0)AAMGACPAS(0.0)EQGY(0.99)EEMR C:Carbamidomethylation,y:Phosphorylated Y ERBB3 151518.9 2 2 20.1 77.34 HUMAN 1 NA -1.5555 CPAVWNGSGAVSARQ-p O00186;S508-p CPAVWNGSGAVSARQ 0.139235306505237 0.340888222533197 0.336 0.102 17.540241199905 6.19107757756627 0.336 0.102 0.0176187819192088 0.240376630013837 3.3698092872226 1.31820892851673 O00186 STXBP3 O00186.S508.p_STXBP3 O00186_S508s _1_1_508_508 O00186 O00186 Syntaxin-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22698.22698.3 14.59 14.59 2.793 4 1 1 0 897.7259 2611.2019 S508s TMT10 494 (K) EWPYCSQCPAVWNGsGAVSAR (Q) EWPY(0.0)CS(0.0)QCPAVWNGS(0.99)GAVS(0.0)AR C:Carbamidomethylation,s:Phosphorylated S STXBP3 68675.9 1 2 3547.1 48.5 HUMAN 1 17.5402 6.1911 CPDQLGPSPKRNTEK-p Q15596;S29-p CPDQLGPSPKRNTEK 0.399238300835451 0.0229363076461719 -0.128333333333333 0.379 7.35684804376482 22.3809806526709 -0.128333333333333 0.379 0.183787172193017 0.00577965525960936 -1.52334425576371 4.4048355243547 Q15596 NCOA2 Q15596.S29.p_NCOA2 Q15596_S29s _1_1_29_29 Q15596 Q15596|E7EWM1 Nuclear receptor coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7943.7943.4 15.93 11.93 99 1 1 1 0 570.5597 2199.2523 S29s TMT10 19 (K) RKECPDQLGPsPK (R) RKECPDQLGPS(1.0)PK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NCOA2 160009.7 11 1 290.1 381.81 HUMAN 1 -7.3568 22.381 CPDYDLCSVCEGKGL-p Q13501;S152-p CPDYDLCSVCEGKGL 0.143205051330728 0.228176798914568 -0.263333333333333 -0.125 17.2445786368064 8.45389668371844 -0.263333333333333 -0.125 0.0188600194516375 0.142761246613742 -3.31096296244049 -1.71324722444409 Q13501 SQSTM1 Q13501.S152.p_SQSTM1 Q13501_S152s _1_1_152_152 Q13501 Q13501|E7EMC7|Q13501-2 Sequestosome-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18372.18372.3 13.08 13.08 5.132 3 1 1 0 829.6849 2407.0802 S152s TMT10 142 (K) CSVCPDYDLCsVCEGK (G) CS(0.0)VCPDY(0.0)DLCS(0.99)VCEGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SQSTM1 48485.1 1 3 541.1 276.49 HUMAN 1 -17.2446 -8.4539 CPEDARLSPEKSLQL-p Q96JM2-3;S1451-p CPEDARLSPEKSLQL 0.915196161002606 0.650860631661276 -0.025 0.052 0.754733924561289 2.54583827920047 -0.025 0.052 0.840478498390792 0.556437219868392 -0.21117149951621 0.626474090410584 Q96JM2 ZNF462 Q96JM2.3.S1451.p_ZNF462 Q96JM2-3_S1451s_1_1_1451_1451 Q96JM2-3 Q96JM2-3|Q96JM2-2 Isoform 3 of Zinc finger protein 462 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26353.26446.5 26.97 24.59 3.929 5 1 1 0 1130.3538 5566.7812 N1431n S1451s TMT10 1411 (K) DAVEKPILSSEELAGPVNCEnSIPTPFPEQEAECPEDARLsPEK (S) DAVEKPILS(0.0)S(0.0)EELAGPVN(0.0)CEN(0.99)S(0.0)IPT(0.0)PFPEQEAECPEDARLS(0.99)PEK K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S ZNF462 296246.7 3 7 736.1 235.26 HUMAN 1 -0.7547 2.5458 CPFTGNVSIRGRILS-p P62280;S67-p CPFTGNVSIRGRILS 0.891062470744815 0.234721694854237 -0.0403333333333333 0.246 0.978079514455315 8.28880491958476 -0.0403333333333333 0.246 0.798347645047936 0.148292609680505 -0.268370829905046 1.68467260410557 P62280 RPS11 P62280.S67.p_RPS11 P62280_S67s _1_1_67_67 P62280 P62280|M0QZC5 40S ribosomal protein S11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14412.14412.3 7.61 7.61 7.611 2 1 1 0 606.3247 1736.9882 S67s TMT10 59 (K) KCPFTGNVsIR (G) KCPFT(0.0)GNVS(0.99)IR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RPS11 18601.6 2 1 6299.1 12.49 HUMAN 1 -0.9781 8.2888 CPGPPPPSPEPLARL-p Q9HB09;S273-p CPGPPPPSPEPLARL 0.431012713610678 0.825533350414788 0.106333333333333 -0.022 6.72984814000561 1.16534448760602 0.106333333333333 -0.022 0.212331870690613 0.76465503267643 1.41363665895838 -0.314822394653722 Q9HB09 BCL2L12 Q9HB09.S273.p_BCL2L12 Q9HB09_S273s _1_1_273_273 Q9HB09 Q9HB09|Q9HB09-3|A0A087WSV0 Bcl-2-like protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13179.13179.2 17.29 17.29 99 1 1 1 0 926.4561 1771.9363 S273s TMT10 265 (R) ACPGPPPPsPEPLAR (L) ACPGPPPPS(1.0)PEPLAR C:Carbamidomethylation,s:Phosphorylated S BCL2L12 37277.2 2 7 1874.1 109.69 HUMAN 1 6.7298 -1.1653 CPHDVEMTPVQRRIE-p Q15334;T704-p CPHDVEMTPVQRRIE 0.247048592039774 0.0898160694983264 0.312 0.204666666666667 11.6029843150339 13.8516064933689 0.312 0.204666666666667 0.0691355732931277 0.0411945108802304 2.2621064796077 2.66413576383216 Q15334 LLGL1 Q15334.T704.p_LLGL1 Q15334_T704t _1_1_704_704 Q15334 Q15334|A0A087WW77 Lethal(2) giant larvae protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16596.16596.3 24.83 24.83 99 1 1 1 0 1015.4778 2964.4505 T704t TMT10 685 (K) LQEANAQLAEQACPHDVEMtPVQR (R) LQEANAQLAEQACPHDVEMT(1.0)PVQR C:Carbamidomethylation,t:Phosphorylated T LLGL1 116728.2 1 2 881.2 207.2 HUMAN 1 11.603 13.8516 CPHIVVGTPGRILAL-p Q13838-2;T187-p CPHIVVGTPGRILAL 0.714570848433642 0.960003970681119 -0.0576666666666667 -0.0053333333333333 2.75082141371433 0.255138620552802 -0.0576666666666667 -0.0053333333333333 0.530784043570873 0.942944513546788 -0.669330388855592 -0.0749468829625497 Q13838 DDX39B Q13838.2.T187.p_DDX39B Q13838-2_T187t _1_1_187_187 Q13838-2 Q13838-2 Isoform 2 of Spliceosome RNA helicase DDX39B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8938.8938.2 18.61 18.61 99 1 1 1 0 808.4017 1535.8314 T187t TMT10 179 (K) NCPHIVVGtPGR (I) NCPHIVVGT(1.0)PGR C:Carbamidomethylation,t:Phosphorylated T DDX39B 51134.9 4 1 4437.1 31.41 HUMAN 1 -2.7508 -0.2551 CPHPAAESPSDEGAL-p Q15596;S1072-p CPHPAAESPSDEGAL 0.0649427933216157 0.186803351592869 0.388333333333333 0.159 25.695637924318 9.5841047945105 0.388333333333333 0.159 0.00269423955316457 0.110049866625688 5.22214562999042 1.90880077969054 Q15596 NCOA2 Q15596.S1072.p_NCOA2 Q15596_S1072s _1_1_1072_1072 Q15596 Q15596 Nuclear receptor coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36503.36503.3 17.35 17.35 1.302 5 1 1 0 1363.6542 4008.9851 S1072s TMT10 1054 (R) QPFGSSPDDLLCPHPAAEsPSDEGALLDQLYLALR (N) QPFGS(0.0)S(0.0)PDDLLCPHPAAES(0.99)PS(0.0)DEGALLDQLY(0.0)LALR C:Carbamidomethylation,s:Phosphorylated S NCOA2 160009.7 2 17 290.1 381.81 HUMAN 1 25.6956 9.5841 CPHVVVGTPGRILAL-p O00148;T171-p CPHVVVGTPGRILAL 0.301042141387919 0.0982866749927908 0.146 0.183666666666667 9.78879228662447 13.3183173349481 0.145451274227583 0.183666666666667 0.104983433258895 0.0465766518849269 1.94503873516911 2.56713742500453 O00148 DDX39A O00148.T171.p_DDX39A O00148_T171t _1_1_171_171 O00148 O00148|O00148-2|O00148-3 ATP-dependent RNA helicase DDX39A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7268.7268.2 17.53 10.46 99 1 1 1 0 801.3953 1521.8157 T171t TMT10 163 (K) NCPHVVVGtPGR (I) NCPHVVVGT(1.0)PGR C:Carbamidomethylation,t:Phosphorylated T DDX39A 49642.1 4 2 2765.1 71.37 HUMAN 1 9.7888 13.3183 CPKQKSQTPPRRSRS-p Q9UQ35;T792-p CPKQKSQTPPRRSRS 0.0404299711718947 0.0594859899677207 0.787666666666667 -0.299 31.1340015023096 16.3296220400506 0.787666666666667 -0.299 0.00077019350118475 0.0232829387675897 6.78470443447189 -3.12947180198165 Q9UQ35 SRRM2 Q9UQ35.T792.p_SRRM2 Q9UQ35_T792t _1_1_792_792 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3198.3198.4 9.87 9.87 2.327 2 1 1 0 409.733 1555.9433 T792t TMT10 788 (K) QKSQtPPRR (S) QKS(0.0)QT(0.99)PPRR K:TMT10,t:Phosphorylated T SRRM2 300351.7 2 24 2.1 3310.34 HUMAN 1 31.134 -16.3296 CPLIFIISDSLSGDN-p A0A0G2JPT5;S259-p CPLIFIISDSLSGDN 0.409152196973989 0.317644062495571 -0.137 0.100666666666667 7.15365631375464 6.58306454439061 -0.137 0.100666666666667 0.192590281798009 0.219630952766304 -1.48788404391206 1.38745405435686 A0A0G2JPT5 NotFound A0A0G2JPT5.S259.p_NotFound A0A0G2JPT5_S259s _1_1_259_259 A0A0G2JPT5 O75943|A0A0G2JPT5|O75943-2|O75943-4|A0A0G2JP78|O75943-3|A0A0G2JNH5 Cell cycle checkpoint protein RAD17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33168.33168.3 10.19 10.19 1.138 3 1 1 0 786.718 2278.1699 S259s TMT10 252 (R) CPLIFIIsDSLSGDNNQR (L) CPLIFIIS(0.99)DS(0.0)LS(0.0)GDNNQR C:Carbamidomethylation,s:Phosphorylated S RAD17 77724 1 2 4686.1 27.97 HUMAN 1 -7.1537 6.5831 CPLPCIPTLIGTPVK-p Q9H0H5;T338-p CPLPCIPTLIGTPVK 0.28377835512685 0.990144326100283 -0.199333333333333 -0.00333333333333332 10.330884528508 0.0651211272724628 -0.199333333333333 -0.00333333333333336 0.0926641074971191 0.985117166926609 -2.03925963298649 -0.0195295966560495 Q9H0H5 RACGAP1 Q9H0H5.T338.p_RACGAP1 Q9H0H5_T338t _1_1_338_338 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27383.27383.3 10.37 8.19 2.478 2 1 1 0 825.7844 2395.3606 T338t TMT10 329 (R) DRCPLPCIPtLIGTPVK (I) DRCPLPCIPT(0.99)LIGT(0.0)PVK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T RACGAP1 71709.9 3 11 574.1 268.64 HUMAN 1 -10.3309 -0.0651 CPNHPVASADLLGSS-p O95352;S531-p CPNHPVASADLLGSS 0.340998799441524 0.241534501392334 0.147333333333333 0.169666666666667 8.68650045170817 8.1275296569516 0.147333333333333 0.169666666666667 0.135316250338906 0.153902981847685 1.75409548296197 1.65674264483888 O95352 ATG7 O95352.S531.p_ATG7 O95352_S531s _1_1_531_531 O95352 O95352|O95352-2|O95352-3 Ubiquitin-like modifier-activating enzyme ATG7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30973.30973.4 17.92 12.43 3.521 4 1 1 0 934.7213 3655.8943 S531s TMT10 517 (K) QQGAGDLCPNHPVAsADLLGSSLFANIPGYK (L) QQGAGDLCPNHPVAS(0.99)ADLLGS(0.0)S(0.0)LFANIPGY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATG7 79099.3 1 1 5586.1 17.92 HUMAN 1 8.6865 8.1275 CPPQRRFSLSPSLGP-p Q9NYF3;S232-p CPPQRRFSLSPSLGP 0.484248741522714 0.0680968382819573 0.115666666666667 0.246666666666667 5.8014418345789 15.5236854734898 0.115666666666667 0.246666666666667 0.262939490185165 0.0280305392420342 1.24911014689042 2.97523286641359 Q9NYF3 FAM53C Q9NYF3.S232.p_FAM53C Q9NYF3_S232s _1_1_232_232 Q9NYF3 Q9NYF3 Protein FAM53C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16633.16633.3 12.07 12.07 2.23 4 1 1 0 604.6509 1731.9703 S232s TMT10 230 (R) RFsLSPSLGPQASR (F) RFS(0.99)LS(0.0)PS(0.0)LGPQAS(0.0)R s:Phosphorylated S FAM53C 43832.4 2 5 976.1 192.85 HUMAN 1 5.8014 15.5237 CPPRDQGTPEVQPTP-p O94762;T839-p CPPRDQGTPEVQPTP 0.213475099509294 0.00526403465745255 0.255666666666667 -0.546666666666667 12.9317074382487 33.1111209443586 0.255666666666667 -0.546666666666667 0.0509130665870045 0.000488526251034965 2.49876822140176 -7.42404764404438 O94762 RECQL5 O94762.T839.p_RECQL5 O94762_T839t _1_1_839_839 O94762 O94762|O94762-4 ATP-dependent DNA helicase Q5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11552.11552.5 15.25 7.88 2.092 5 1 1 0 749.9843 3665.9313 T839t TMT10 827 (R) ERPSTCPPRDQGtPEVQPTPAKDTWK (G) ERPS(0.0)T(0.0)CPPRDQGT(0.99)PEVQPT(0.0)PAKDT(0.0)WK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T RECQL5 110568 3 5 823.1 218.4 HUMAN 1 12.9317 -33.1111 CPRSASASPLTPCSV-p Q3KQU3;S368-p CPRSASASPLTPCSV 0.850600175936078 0.135364189729409 0.0356666666666667 -0.192666666666667 1.36010001851962 11.4482192259666 0.0356666666666667 -0.192666666666667 0.731122245459967 0.0716437116703968 0.361916594930116 -2.2337737516143 Q3KQU3 MAP7D1 Q3KQU3.S368.p_MAP7D1 Q3KQU3_S368s _1_1_368_368 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11791.11791.2 13.38 13.38 1.487 6 1 1 0 871.9222 1662.8682 S368s TMT10 364 (R) SASAsPLTPCSVTR (S) S(0.0)AS(0.0)AS(0.99)PLT(0.0)PCS(0.0)VT(0.0)R C:Carbamidomethylation,s:Phosphorylated S MAP7D1 93160.6 1 12 160.1 495.56 HUMAN 1 1.3601 -11.4482 CPSQESLSQEENPEP-p Q86W50;S455-p CPSQESLSQEENPEP 0.55888995164706 0.00685566093054045 0.103666666666667 0.603666666666667 4.6641225513537 31.043371116761 0.103666666666667 0.603666666666667 0.341654971689704 0.000786435099512128 1.04213088516636 6.74477722450959 Q86W50 METTL16 Q86W50.S455.p_METTL16 Q86W50_S455s_1_1_455_455 Q86W50 Q86W50 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15049.15049.5 14.59 16.4 1.134 6 1 1 0 1028.0668 5055.3472 S455s N459n TMT10 430 (R) TPCGPALREGEAAAVEGPCPSQESLsQEEnPEPTEDERSEEK (G) T(0.0)PCGPALREGEAAAVEGPCPS(0.0)QES(0.0)LS(0.99)QEEN(1.0)PEPT(0.0)EDERS(0.0)EEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated METTL16 64418.6 3 6 1049.1 183.96 HUMAN 1 4.6641 31.0434 CPTEPPPSPLICFSL-p Q16584;S693-p CPTEPPPSPLICFSL 0.486766168898128 0.0238855265780047 -0.108333333333333 -0.361333333333333 5.75966229515598 22.1119096160955 -0.108333333333333 -0.361333333333333 0.265481199057413 0.00614906435605047 -1.2416286111418 -4.34294451786312 Q16584 MAP3K11 Q16584.S693.p_MAP3K11 Q16584_S693s _1_1_693_693 Q16584 Q16584|Q16584-2|E9PID4 Mitogen-activated protein kinase kinase kinase 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26119.26119.4 18.68 18.68 4.431 8 1 1 0 1000.0052 3917.0229 S693s TMT10 670 (R) ERGESPTTPPTPTPAPCPTEPPPsPLICFSLK (T) ERGES(0.0)PT(0.0)T(0.0)PPT(0.0)PT(0.0)PAPCPT(0.0)EPPPS(0.99)PLICFS(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP3K11 93313.9 3 10 536.1 278.53 HUMAN 1 -5.7597 -22.1119 CPTPELGSPLPSRTG-p Q8IWY9;S277-p CPTPELGSPLPSRTG 0.62721433016164 0.526800944414145 0.0653333333333333 -0.0786666666666666 3.76521093066011 3.74004649215395 0.0653333333333334 -0.0786666666666666 0.420222117590403 0.422664089531829 0.871974712983087 -0.866961290735635 Q8IWY9 CDAN1 Q8IWY9.S277.p_CDAN1 Q8IWY9_S277s _1_1_277_277 Q8IWY9 Q8IWY9|Q8IWY9-1 Codanin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18271.18271.3 19.81 19.81 1.365 6 1 1 0 900.7805 2620.3602 S277s TMT10 261 (K) QLQQSPTPTCPTPELGsPLPSR (T) QLQQS(0.0)PT(0.0)PT(0.0)CPT(0.0)PELGS(0.99)PLPS(0.0)R C:Carbamidomethylation,s:Phosphorylated S CDAN1 135657.7 2 5 1756.1 117.34 HUMAN 1 3.7652 -3.74 CPTPKVQSRCSSKEN-p Q9NQX3-2;S324-p CPTPKVQSRCSSKEN 0.0695609117854893 0.109995826658603 0.473666666666667 -0.243 24.9624305482652 12.6604446891068 0.473666666666667 -0.243 0.00318975219655498 0.0541945395901286 5.03426787874971 -2.44875531584666 Q9NQX3 GPHN Q9NQX3.2.S324.p_GPHN Q9NQX3-2_T319tS324s_2_2_319_324 Q9NQX3-2 Q9NQX3-2|G3V582 Isoform 2 of Gephyrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10628.10628.3 11.15 6.45 1.35 5 2 2 0 717.3531 1990.1156 T319t S324s TMT10 312 (R) LSTASCPtPKVQsR (C) LS(0.0)T(0.0)AS(0.0)CPT(0.99)PKVQS(0.99)R C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S GPHN 84130.7 1 8 1469.1 139.8 HUMAN 1 24.9624 -12.6604 CPYEGKISPAKVAEV-p P35914;S181-p CPYEGKISPAKVAEV 0.908443303300714 0.0442350267295786 -0.023 0.332333333333333 0.820593471559221 18.1369478538323 -0.023 0.332333333333333 0.827829031592032 0.0153569586401859 -0.228250282802233 3.48715181857351 P35914 HMGCL P35914.S181.p_HMGCL P35914_S181s _1_1_181_181 P35914 P35914 Hydroxymethylglutaryl-CoA lyase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19471.19471.3 11.46 11.46 3.873 4 1 1 0 942.1538 2744.4719 S181s TMT10 166 (R) GYVSCALGCPYEGKIsPAK (V) GY(0.0)VS(0.0)CALGCPY(0.0)EGKIS(0.99)PAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HMGCL 34816 1 2 5245.1 21.37 HUMAN 1 -0.8206 18.1369 CQDSLTLSLLKVFPQ-p Q8TDM6;S791-p CQDSLTLSLLKVFPQ 0.582575200829836 0.363801844229522 0.083 0.132 4.31741113133048 5.82100926802065 0.083 0.132 0.370048703423246 0.261757463268726 0.9773372848724 1.25232181923568 Q8TDM6 DLG5 Q8TDM6.S791.p_DLG5 Q8TDM6_S791s _1_1_791_791 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.26875.26875.3 17.42 14.76 3.971 4 1 1 0 635.0059 1823.0349 S791s TMT10 783 (R) SCQDSLTLsLLK (V) S(0.0)CQDS(0.0)LT(0.0)LS(0.99)LLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DLG5 215575.4 3 11 34.1 890.58 HUMAN 1 4.3174 5.821 CQEHSKESPARSTPH-p Q9NQW6;S388-p CQEHSKESPARSTPH 0.351992075460172 0.00498241622483435 0.160333333333333 -0.88 8.42012885136273 33.5803754165487 0.160333333333333 -0.88 0.143875589099753 0.000438492791567901 1.70797511583482 -7.58593405703577 Q9NQW6 ANLN Q9NQW6.S388.p_ANLN Q9NQW6_S388s _1_1_388_388 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3449.3449.3 14.33 8.09 2.516 2 1 1 0 622.9691 1786.927 S388s TMT10 381 (R) CQEHSKEsPAR (S) CQEHS(0.0)KES(0.99)PAR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANLN 125566 1 26 68.1 675.08 HUMAN 1 8.4201 -33.5804 CQGACGPSPPDQKTR-p P18754-2;S47-p CQGACGPSPPDQKTR 0.557193531914855 0.0143512456034242 0.078 0.418666666666667 4.68827661772592 25.5583312886991 0.0779216106039406 0.418666666666667 0.339760070600877 0.00278078153604157 1.04661048396843 5.17993486661104 P18754 RCC1 P18754.2.S47.p_RCC1 P18754-2_S47s _1_1_47_47 P18754-2 P18754-2 Isoform 2 of Regulator of chromosome condensation HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7685.7685.2 15.81 15.81 9.08 2 1 1 0 1013.9602 1946.9465 S47s TMT10 39 (R) SCQGACGPsPPDQK (T) S(0.0)CQGACGPS(0.99)PPDQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RCC1 48715.3 1 2 2680.1 74.17 HUMAN 1 4.6883 25.5583 CQNPRKQSLPATSIP-p P49792;S1509-p CQNPRKQSLPATSIP 0.48930252929201 0.0106218169506843 0.0936666666666667 0.777666666666667 5.72121602191006 27.6817466130193 0.0936666666666667 0.777666666666667 0.267841826432939 0.00170539638752092 1.23473702870657 5.7484481245334 P49792 RANBP2 P49792.S1509.p_RANBP2 P49792_S1509s _1_1_1509_1509 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22406.22609.4 8.87 8.87 2.381 5 1 1 0 610.8514 2360.4156 S1509s TMT10 1507 (R) KQsLPATSIPTPASFK (F) KQS(0.99)LPAT(0.0)S(0.0)IPT(0.0)PAS(0.0)FK K:TMT10,s:Phosphorylated S RANBP2 362585.9 4 28 9.1 1298.62 HUMAN 1 5.7212 27.6817 CQPARSDSYSQSLKS-p Q9H8W4;S226-p CQPARSDSYSQSLKS 0.0147628603234759 0.0104377289471877 -1.064 -0.659 43.4535345777518 27.8123678359579 -1.064 -0.659 4.51488343521238e-05 0.00165486745993019 -11.8298286840269 -5.7848740404705 Q9H8W4 PLEKHF2 Q9H8W4.S226.p_PLEKHF2 Q9H8W4_S226s _1_1_226_226 Q9H8W4 Q9H8W4 Pleckstrin homology domain-containing family F member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10827.10827.2 13.16 13.16 1.348 5 1 1 0 776.8868 1472.7997 S226s TMT10 224 (R) SDsYSQSLK (S) S(0.0)DS(0.99)Y(0.0)S(0.0)QS(0.0)LK K:TMT10,s:Phosphorylated S PLEKHF2 28481.9 9 5 2014.1 102.32 HUMAN 1 -43.4535 -27.8124 CQRSTVASMMHRQET-p Q13555-8;S280-p CQRSTVASMMHRQET 0.577800838163311 0.854108030947368 0.0783333333333333 -0.026 4.38312546527759 0.96480976955285 0.0783333333333333 -0.026 0.364491540718866 0.800790704116412 0.989691835986809 -0.265001906257429 Q13555 CAMK2G Q13555.8.S280.p_CAMK2G Q13555-8_S280s _1_1_280_280 Q13555-8 Q13555-6|A0A0A0MT11|Q13555-8|Q13555-2|Q13555-9|A0A0A0MS52|Q13555-7|Q13555-4|Q13555-5|Q13555-3 Isoform 8 of Calcium/calmodulin-dependent protein kinase type II subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11879.11879.5 14.53 14.53 2.139 4 1 1 0 541.0729 2621.3726 S280s TMT10 276 (R) STVAsMMHRQETVECLRK (F) S(0.0)T(0.0)VAS(0.99)MMHRQET(0.0)VECLRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CAMK2G 62905.2 6 5 1309.1 155.32 HUMAN 1 4.3831 -0.9648 CQTAEADSESDHEVP-p Q9BPX3;S973-p CQTAEADSESDHEVP 0.666639852843335 0.599573782982173 0.0603333333333333 0.0553333333333334 3.29081932899995 3.01060364639944 0.0603333333333333 0.0553333333333334 0.468724945339134 0.499965037646752 0.778886589165807 0.722463590440541 Q9BPX3 NCAPG Q9BPX3.S973.p_NCAPG Q9BPX3_S973sS975s_2_2_973_975 Q9BPX3 Q9BPX3 Condensin complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13605.13605.2 17.25 17.25 5.491 4 2 2 0 1562.132 2963.3287 S973s S975s TMT10 966 (R) CQTAEADsEsDHEVPEPESEMK (M) CQT(0.0)AEADS(0.99)ES(0.99)DHEVPEPES(0.0)EMK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NCAPG 115416.1 13 8 1123.1 174.85 HUMAN 1 3.2908 3.0106 CQTLSEGSPGSSQSG-p O94972;S797-p CQTLSEGSPGSSQSG 0.192652167830757 0.0305385015304316 -0.215 -0.406333333333333 13.9586496075682 20.474559643942 -0.215 -0.406333333333333 0.0401915762847061 0.00896487081303254 -2.68532961918029 -3.97770892805765 O94972 TRIM37 O94972.S797.p_TRIM37 O94972_S797s _1_1_797_797 O94972 O94972|O94972-3|O94972-2 E3 ubiquitin-protein ligase TRIM37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5635.5635.3 16.94 16.94 2.004 8 1 1 0 884.0776 2570.2517 S797s TMT10 786 (R) SKGDCQTLSEGsPGSSQSGSR (H) S(0.0)KGDCQT(0.0)LS(0.0)EGS(0.99)PGS(0.0)S(0.0)QS(0.0)GS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TRIM37 109558.4 3 3 3309.1 54.28 HUMAN 1 -13.9586 -20.4746 CRAEEGKSPFRESSG-p O15014;S758-p CRAEEGKSPFRESSG 0.569246194913171 0.268353223732572 -0.137666666666667 0.147333333333333 4.50266776654761 7.52301121766063 -0.137666666666667 0.147333333333333 0.354595502830435 0.176888206363153 -1.01207573604729 1.55182671847599 O15014 ZNF609 O15014.S758.p_ZNF609 O15014_S758s _1_1_758_758 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8682.8682.3 13.13 13.13 3.865 3 1 1 0 784.0438 2270.1487 S758s Hydrogen 753 (R) AEEGKsPFRESSGDGMK (M) AEEGKS(0.99)PFRES(0.0)S(0.0)GDGMK K:TMT10-Lys-Only,s:Phosphorylated S ZNF609 152443.5 8 19 63.1 699.07 HUMAN 1 -4.5027 7.523 CRALPRGSPHSDLKE-p O75376-2;S1297-p CRALPRGSPHSDLKE 0.771167804912572 0.250955204955263 0.041 0.191666666666667 2.16398652406081 7.90919882075853 0.041 0.191666666666667 0.607577031383765 0.161837856589402 0.544819373391656 1.61889798871708 O75376 NCOR1 O75376.2.S1297.p_NCOR1 O75376-2_S1297s _1_1_1297_1297 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4548.4548.3 10.7 6.76 2.684 2 1 1 0 383.8549 1069.5839 S1297s Hydrogen 1296 (R) GsPHSDLK (E) GS(0.99)PHS(0.0)DLK K:TMT10-Lys-Only,s:Phosphorylated S NCOR1 259453.1 4 10 35.1 889.74 HUMAN 1 2.164 7.9092 CREEHSKTPEERSLP-p Q9C0C2;T239-p CREEHSKTPEERSLP 0.820251131741865 0.606952401731581 -0.037 -0.0806666666666666 1.6581308138359 2.94428221248417 -0.037 -0.0806666666666666 0.682632433207277 0.507658636231275 -0.431687254138533 -0.708974037745673 Q9C0C2 TNKS1BP1 Q9C0C2.T239.p_TNKS1BP1 Q9C0C2_T239t _1_1_239_239 Q9C0C2 Q9C0C2|E9PKK0 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4038.4038.5 13.88 13.88 1.993 3 1 1 0 496.8388 2400.1978 T239t TMT10 228 (K) SPAECREEHSKtPEER (S) S(0.0)PAECREEHS(0.0)KT(0.99)PEER C:Carbamidomethylation,K:TMT10,t:Phosphorylated T TNKS1BP1 182819.3 8 7 4.1 2105.7 HUMAN 1 -1.6581 -2.9443 CRENYSDSEEEDDDD-p Q9Y2U8;S261-p CRENYSDSEEEDDDD 0.297571003658287 0.0986438553248302 0.192666666666667 0.292 9.89903904590336 13.2968462317795 0.192666666666667 0.292 0.102351943918084 0.046807492547077 1.96417530968718 2.5632522303754 Q9Y2U8 LEMD3 Q9Y2U8.S261.p_LEMD3 Q9Y2U8_S261s _1_1_261_261 Q9Y2U8 Q9Y2U8 Inner nuclear membrane protein Man1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14356.14356.4 21.2 21.2 1.758 7 1 1 0 812.3375 3166.3592 S261s TMT10 249 (R) LVPYSCRENYSDsEEEDDDDVASSR (Q) LVPY(0.0)S(0.0)CRENY(0.0)S(0.0)DS(0.99)EEEDDDDVAS(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S LEMD3 100851.5 4 8 412.1 321.94 HUMAN 1 9.899 13.2968 CRFVHGPSPRGKGYS-p Q5T200;S64-p CRFVHGPSPRGKGYS 0.530763566971729 0.00957064750064106 0.0883333333333333 -0.427 5.0895497667852 28.4749126718213 0.0883333333333333 -0.427 0.309774042541007 0.00142072078050633 1.12044353438462 -5.9723632819325 Q5T200 ZC3H13 Q5T200.S64.p_ZC3H13 Q5T200_S64s _1_1_64_64 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8466.8466.3 15.5 15.5 99 1 1 1 0 402.5393 1125.6366 S64s TMT10 59 (R) FVHGPsPR (G) FVHGPS(1.0)PR s:Phosphorylated S ZC3H13 197316.7 4 1 24.1 987.82 HUMAN 1 5.0895 -28.4749 CRIFDLGSDNEEVVA-p Q969U6;S284-p CRIFDLGSDNEEVVA 0.259680102073393 0.339727050512632 -0.19 -0.118 11.1095324547812 6.21076891437972 -0.19 -0.118 0.077454517795526 0.239289205956399 -2.17530968556022 -1.32169990010516 Q969U6 FBXW5 Q969U6.S284.p_FBXW5 Q969U6_S284s _1_1_284_284 Q969U6 Q969U6|Q969U6-2 F-box/WD repeat-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23509.23509.3 21.2 21.2 99 1 1 1 0 892.4531 2595.3819 S284s TMT10 279 (R) IFDLGsDNEEVVAGPAPAHAK (E) IFDLGS(1.0)DNEEVVAGPAPAHAK K:TMT10,s:Phosphorylated S FBXW5 64548.8 3 2 2143.1 95.92 HUMAN 1 -11.1095 -6.2108 CRKMGVPYCIIKGKA-p P62424;Y181-p CRKMGVPYCIIKGKA 0.59992802754024 0.362701026178608 -0.079 -0.0913333333333333 4.09831251405977 5.8407064256274 -0.079 -0.0913333333333333 0.389196340968886 0.260572966620389 -0.935876079575963 -1.25584293467671 P62424 RPL7A P62424.Y181.p_RPL7A P62424_Y181y _1_1_181_181 P62424 P62424|Q5T8U2 60S ribosomal protein L7a GG20160819_MSz_CCLE_T4D7_pY_Injection_01.23473.23518.3 17.67 14.04 99 1 1 1 0 659.3767 1896.1418 Y181y TMT10 176 (R) KMGVPyCIIK (G) KMGVPY(1.0)CIIK K:TMT10,C:Carbamidomethylation,y:Phosphorylated Y RPL7A 30166.2 2 1 201.1 17.67 HUMAN 1 -4.0983 -5.8407 CRLEADQSPKNSAIL-p P49454;S821-p CRLEADQSPKNSAIL 0.969003701508516 0.00977013112430698 0.00599999999999999 -0.432 0.268407885461656 28.2949536356035 0.00599999999999999 -0.432 0.940067874330206 0.00148082806420267 0.0787418359266018 -5.92098240767878 P49454 CENPF P49454.S821.p_CENPF P49454_S821s _1_1_821_821 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23636.23636.4 15.52 12.56 2.514 5 1 1 0 921.9797 3604.9223 S821s Hydrogen 816 (R) LEADQsPKNSAILQNRVDSLEFSLESQK (Q) LEADQS(0.99)PKNS(0.0)AILQNRVDS(0.0)LEFS(0.0)LES(0.0)QK K:TMT10-Lys-Only,s:Phosphorylated S CENPF 371067.2 9 7 47.1 771.73 HUMAN 1 0.2684 -28.295 CRLHLYNSLTRNKEV-p P49589-3;S117-p CRLHLYNSLTRNKEV 0.893550753123429 0.919057877610666 -0.0203333333333333 0.013 0.954783986022465 0.516615640996592 -0.0203333333333333 0.013 0.802641482509798 0.887847622163902 -0.262497690271349 0.147791879642017 P49589 CARS P49589.3.S117.p_CARS P49589-3_S117s _1_1_117_117 P49589-3 P49589-3|B4DKY1|P49589-2|E9PLP0 Isoform 3 of Cysteine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15272.15272.2 11.62 10 1.225 3 1 1 0 713.3774 1345.779 S117s TMT10 112 (R) LHLYNsLTR (N) LHLY(0.0)NS(0.99)LT(0.0)R s:Phosphorylated S CARS 95434.6 2 3 2202.1 93.6 HUMAN 1 -0.9548 0.5166 CRLNRSDSDSSTLAK-p Q6AWC2-6;S1046-p CRLNRSDSDSSTLAK 0.589750668393929 0.920911162787851 -0.0983333333333334 -0.013 4.22517975247189 0.502631494443762 -0.0983333333333333 -0.013 0.377991492085487 0.89071107138676 -0.959935549097338 -0.143987112108677 Q6AWC2 WWC2 Q6AWC2.6.S1046.p_WWC2 Q6AWC2-6_S1046s _1_1_1046_1046 Q6AWC2-6 Q6AWC2-6|Q6AWC2-4|Q6AWC2-2|Q6AWC2-3|Q6AWC2-7 Isoform 6 of Protein WWC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9138.9138.2 14.52 14.52 2.285 5 1 1 0 774.8813 1468.7895 S1046s TMT10 1044 (R) SDsDSSTLAK (K) S(0.0)DS(0.99)DS(0.0)S(0.0)T(0.0)LAK K:TMT10,s:Phosphorylated S WWC2 137930.4 9 8 1158.1 171.22 HUMAN 1 -4.2252 -0.5026 CRLNRSDSDSSTLSK-p Q8IX03-2;S947-p CRLNRSDSDSSTLSK 0.668875450269392 0.340830903280014 -0.078 -0.119333333333333 3.26662806124165 6.19232054468935 -0.078 -0.119333333333333 0.471343143473605 0.240307843163261 -0.774066176459747 -1.31842932921973 Q8IX03 WWC1 Q8IX03.2.S947.p_WWC1 Q8IX03-2_S947s _1_1_947_947 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9047.9047.3 13.74 13.74 1.722 6 1 1 0 649.997 1868.0125 S947s TMT10 942 (R) LNRSDsDSSTLSK (K) LNRS(0.0)DS(0.99)DS(0.0)S(0.0)T(0.0)LS(0.0)K K:TMT10,s:Phosphorylated S WWC1 126701.1 6 19 312.1 370.85 HUMAN 1 -3.2666 -6.1923 CRLPPPPSPPPPAPK-p A0A087X1K6;S103-p CRLPPPPSPPPPAPK 0.18863765659071 0.0063803902699255 -0.401 -0.649333333333333 14.2076504427726 31.5846269486666 -0.401 -0.649333333333333 0.0379520252004029 0.000694284236949544 -2.73112373736333 -6.91738408749009 A0A087X1K6 NotFound A0A087X1K6.S103.p_NotFound A0A087X1K6_T94tS103s_2_2_94_103 A0A087X1K6 A0A087X1K6 Krueppel-like factor 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10557.10557.4 9.22 9.22 99 2 2 2 0 606.8126 2264.299 T94t S103s TMT10 94 (R) tPCRLPPPPsPPPPAPK (A) T(1.0)PCRLPPPPS(1.0)PPPPAPK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S KLF13 31681 1 3 4960.1 24.66 HUMAN 1 -14.2077 -31.5846 CRLYRSDSDSSTLPR-p Q9ULE0;S927-p CRLYRSDSDSSTLPR 0.941601783060378 0.717878129451234 0.0123333333333333 0.052 0.51464859540005 1.98123830935126 0.0123333333333333 0.052 0.88824984517018 0.633689000948443 0.147271021498291 0.504584726318783 Q9ULE0 WWC3 Q9ULE0.S927.p_WWC3 Q9ULE0_S927s _1_1_927_927 Q9ULE0 Q9ULE0 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7198.7198.2 12.9 12.9 1.163 5 1 1 0 687.3116 1293.6484 S927s TMT10 925 (R) SDsDSSTLPR (K) S(0.0)DS(0.99)DS(0.0)S(0.0)T(0.0)LPR s:Phosphorylated S WWC3 123814.7 6 26 161.1 495.35 HUMAN 1 0.5146 1.9812 CRRIATGSFLKRNPG-p P22234-2;S114-p CRRIATGSFLKRNPG 0.323165519835905 0.507635121456889 -0.143333333333333 -0.085 9.18282053912868 3.94605665304894 -0.143333333333333 -0.085 0.120702967129123 0.40308286309865 -1.84001471197943 -0.906652110305526 P22234 PAICS P22234.2.S114.p_PAICS P22234-2_S114s _1_1_114_114 P22234-2 P22234-2|D6RF62 Isoform 2 of Multifunctional protein ADE2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22055.22055.2 13.33 6.73 2.133 2 1 1 0 687.8943 1294.8135 S114s TMT10 110 (R) IATGsFLK (R) IAT(0.0)GS(0.99)FLK K:TMT10,s:Phosphorylated S PAICS 48699 5 3 991.1 191.33 HUMAN 1 -9.1828 -3.9461 CRRRRLGSVMRPTED-p Q9P2H5;S613-p CRRRRLGSVMRPTED 0.130013664511896 0.530613470400321 -0.262666666666667 -0.0746666666666666 18.3289133036317 3.7008519935849 -0.262758120962069 -0.0746666666666666 0.0146929387996105 0.426495841163253 -3.52913950942183 -0.859359364998777 Q9P2H5 USP35 Q9P2H5.S613.p_USP35 Q9P2H5_S613s _1_1_613_613 Q9P2H5 Q9P2H5|Q9P2H5-2|E9PK78 Ubiquitin carboxyl-terminal hydrolase 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17668.17668.3 8.63 8.63 1.54 3 1 1 0 618.983 1774.9683 S613s TMT10 611 (R) LGsVMRPTEDITAR (E) LGS(0.99)VMRPT(0.0)EDIT(0.0)AR s:Phosphorylated S USP35 115114.6 1 2 4045.1 38.65 HUMAN 1 -18.3289 -3.7009 CRTLLSESPGKLHVE-p Q9UPY3;S1160-p CRTLLSESPGKLHVE 0.199685838936419 0.0490434175340851 -0.431333333333333 -0.298666666666667 13.6094563148845 17.5143515675752 -0.431333333333333 -0.298666666666667 0.0435566398012944 0.0177241265914518 -2.62148947549363 -3.3619783150024 Q9UPY3 DICER1 Q9UPY3.S1160.p_DICER1 Q9UPY3_S1160s _1_1_1160_1160 Q9UPY3 Q9UPY3|Q9UPY3-2|Q9UPY3-3 Endoribonuclease Dicer HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16225.16225.2 12.11 7.34 2.514 3 1 1 0 735.4051 1389.8354 S1160s TMT10 1155 (R) TLLSEsPGK (L) T(0.0)LLS(0.0)ES(0.99)PGK K:TMT10,s:Phosphorylated S DICER1 221416.1 3 4 942.1 197.99 HUMAN 1 -13.6095 -17.5144 CRTPLGASLDEQSSS-p P28290;S92-p CRTPLGASLDEQSSS 0.559981380772224 0.886516221685276 0.098 0.021 4.64826549091483 0.735360499874038 0.098 0.021 0.342904710363018 0.844236160507061 1.03918772453027 0.206092584177299 P28290 SSFA2 P28290.S92.p_SSFA2 P28290_S92s _1_1_92_92 P28290 P28290|P28290-3|E9PHV5 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19010.19215.2 17.82 16 4.493 6 1 1 0 1086.5637 2092.1538 S92s TMT10 87 (R) TPLGAsLDEQSSSTLK (G) T(0.0)PLGAS(0.99)LDEQS(0.0)S(0.0)S(0.0)T(0.0)LK K:TMT10,s:Phosphorylated S SSFA2 139638.7 9 3 73.1 652.35 HUMAN 1 4.6483 0.7354 CRTPRAASLMNIPST-p P52948;S1075-p CRTPRAASLMNIPST 0.67297644962743 0.738040078927322 0.0883333333333333 -0.0396666666666666 3.22264493867351 1.81917392611125 0.0883333333333333 -0.0396666666666667 0.476140919316544 0.657782942707043 0.765282321250878 -0.468321073260315 P52948 NUP98 P52948.S1075.p_NUP98 P52948_S1075s _1_1_1075_1075 P52948 P52948|P52948-5|P52948-2 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37578.37578.4 24.76 22.41 4.261 10 1 1 0 1044.547 4095.1951 S1075s TMT10 1073 (R) AAsLMNIPSTSSWSVPPPLTSVFTMPSPAPEVPLK (T) AAS(0.99)LMNIPS(0.0)T(0.0)S(0.0)S(0.0)WS(0.0)VPPPLT(0.0)S(0.0)VFT(0.0)MPS(0.0)PAPEVPLK K:TMT10,s:Phosphorylated S NUP98 198716.8 7 22 187.1 472.84 HUMAN 1 3.2226 -1.8192 CRTSGSVYITLKKYD-p P37108;Y27-p CRTSGSVYITLKKYD 0.696334309389433 0.377582799612619 0.0676666666666667 0.114 2.9535616374048 5.61828523536786 0.0676666666666667 0.114 0.50657509699798 0.274265686646912 0.710964258138127 1.21598047735094 P37108 SRP14 P37108.Y27.p_SRP14 P37108_Y27y _1_1_27_27 P37108 P37108|H0YLA2 Signal recognition particle 14 kDa protein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.22559.22604.2 18.43 18.43 4.607 5 1 1 0 803.9468 1526.9194 Y27y TMT10 22 (R) TSGSVyITLK (K) T(0.0)S(0.0)GS(0.0)VY(0.99)IT(0.0)LK K:TMT10,y:Phosphorylated Y SRP14 14683.8 9 1 67.1 34.75 HUMAN 1 2.9536 5.6183 CRVKYCNSLPDIPFD-p Q8N7H5-3;S28-p CRVKYCNSLPDIPFD 0.788927294767127 0.498349042489473 0.0423333333333333 0.0686666666666667 1.98509114489224 4.04745718862041 0.0423333333333333 0.0686666666666667 0.63312707420501 0.393780568053087 0.505497830548188 0.926032062669435 Q8N7H5 PAF1 Q8N7H5.3.S28.p_PAF1 Q8N7H5-3_S28s _1_1_28_28 Q8N7H5-3 Q8N7H5|Q8N7H5-2|Q8N7H5-3 Isoform 3 of RNA polymerase II-associated factor 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27940.27940.3 15.8 10.87 6.937 2 1 1 0 702.0103 2024.0563 S28s TMT10 25 (K) YCNsLPDIPFDPK (F) Y(0.0)CNS(0.99)LPDIPFDPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PAF1 55757.2 1 1 3398.1 52.06 HUMAN 1 1.9851 4.0475 CRVTRDGSAFEDGLR-p P55265-4;S1132-p CRVTRDGSAFEDGLR 0.898642230416548 0.617752353051399 -0.019 -0.05 0.907833866718846 2.84469068097357 -0.019 -0.05 0.811365642292703 0.519434668060447 -0.250597010523339 -0.688592929147099 P55265 ADAR P55265.4.S1132.p_ADAR P55265-4_S1132s _1_1_1132_1132 P55265-4 P55265-4|P55265-2|P55265-3|P55265-5 Isoform 4 of Double-stranded RNA-specific adenosine deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17814.17814.4 16.05 11.02 99 1 1 1 0 669.3432 2594.388 S1132s TMT10 1130 (R) DGsAFEDGLRHPFIVNHPK (V) DGS(1.0)AFEDGLRHPFIVNHPK K:TMT10,s:Phosphorylated S ADAR 142147.5 3 17 584.1 265.43 HUMAN 1 -0.9078 -2.8447 CRYKFHNSRWMVAGK-p Q13207;S170-p CRYKFHNSRWMVAGK 0.207422631751664 0.164214205076811 0.230666666666667 0.182666666666667 13.1867819154332 10.3162642896936 0.230666666666667 0.182666666666667 0.0480089058710627 0.092976580801116 2.54477913676386 2.03586113483112 Q13207 TBX2 Q13207.S170.p_TBX2 Q13207_S170s_1_1_170_170 Q13207 Q13207 T-box transcription factor TBX2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26845.26845.5 8.38 2.75 1.786 3 1 1 0 809.008 3960.1054 N169n S170s TMT10 151 (K) YILLMDIVAADDCRYKFHnsRWMVAGK (A) Y(0.0)ILLMDIVAADDCRY(0.0)KFHN(1.0)S(0.99)RWMVAGK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S TBX2 75292.9 1 1 2245.1 91.76 HUMAN 1 13.1868 10.3163 CSDTGACTPARSFLA-p Q9UJC3;T699-p CSDTGACTPARSFLA 0.948131958402904 0.0109389202802069 0.01 -0.439 0.459134479693966 27.4747921127644 0.00999999999999999 -0.439 0.899676863339483 0.00178863114490545 0.132101800537768 -5.6910918850611 Q9UJC3 HOOK1 Q9UJC3.T699.p_HOOK1 Q9UJC3_T699t _1_1_699_699 Q9UJC3 Q9UJC3|Q9UJC3-2 Protein Hook homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9410.9410.2 13.15 13.15 2.143 4 1 1 0 1023.4518 1965.932 T699t TMT10 685 (R) LVSGGGACSDTGACtPAR (S) LVS(0.0)GGGACS(0.0)DT(0.0)GACT(0.99)PAR C:Carbamidomethylation,t:Phosphorylated T HOOK1 85274 2 4 1245.1 162.36 HUMAN 1 0.4591 -27.4748 CSEEEDIT_______-p Q9H246;T121-p CSEEEDIT_______ 0.369805323847201 0.0509038139829833 0.198333333333333 0.281 8.01338714719611 17.2709486533159 0.198333333333333 0.281 0.158001527393823 0.0187458498743616 1.63748285235431 3.31361701801264 Q9H246 C1orf21 Q9H246.T121.p_C1orf21 Q9H246_T121t _1_1_121_121 Q9H246 Q9H246 Uncharacterized protein C1orf21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9413.9413.2 9.1 9.1 1.154 3 1 1 0 891.8579 1702.7428 T121t TMT10 110 (K) GRDYCSEEEDIt (-) GRDY(0.0)CS(0.0)EEEDIT(0.99) C:Carbamidomethylation,t:Phosphorylated T C1orf21 13979.2 1 2 4600.1 28.98 HUMAN 1 8.0134 17.2709 CSGFEPHSWRKICKS-p Q9NZU5;S42-p CSGFEPHSWRKICKS 0.531734774301321 0.253059813917132 0.093 0.195 5.07672992243067 7.8598577873298 0.093 0.195 0.310689808749971 0.163687012097123 1.11810086049025 1.61033890653049 Q9NZU5 LMCD1 Q9NZU5.S42.p_LMCD1 Q9NZU5_S42s _1_1_42_42 Q9NZU5 Q9NZU5|H7C3D2 LIM and cysteine-rich domains protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11144.11144.3 12.75 8.33 1.671 3 1 1 0 696.335 2007.0271 S42s TMT10 33 (K) GTCSGFEPHsWRK (I) GT(0.0)CS(0.0)GFEPHS(0.99)WRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LMCD1 42030.2 1 2 4084.1 37.88 HUMAN 1 5.0767 7.8599 CSGKGDMSDEDDENE-p P22059;S351-p CSGKGDMSDEDDENE 0.543303086473255 0.0352412799548924 -0.0866666666666667 0.274 4.8922887833461 19.5628821933887 -0.0866666666666667 0.274 0.324168731563748 0.0110588961723954 -1.08428199722667 3.78232087454434 P22059 OSBP P22059.S351.p_OSBP P22059_S351s _1_1_351_351 P22059 P22059 Oxysterol-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28872.28872.4 28.96 28.96 20.828 2 1 1 0 973.1889 3809.7675 S351s TMT10 348 (K) GDMsDEDDENEFFDAPEIITMPENLGHKR (T) GDMS(0.99)DEDDENEFFDAPEIIT(0.0)MPENLGHKR K:TMT10,s:Phosphorylated S OSBP 90274.8 42 8 468.1 302.79 HUMAN 1 -4.8923 19.5629 CSISGHGSLNSISRH-p O75044;S900-p CSISGHGSLNSISRH 0.759979998706191 0.957832844407715 0.0516666666666667 0.00700000000000002 2.28610880841099 0.269310804479913 0.0516666666666667 0.00700000000000003 0.590730125492329 0.939872450034403 0.571270322659475 0.0789919747013973 O75044 SRGAP2 O75044.S900.p_SRGAP2 O75044_S900s _1_1_900_900 O75044 O75044|B7ZM87 SLIT-ROBO Rho GTPase-activating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8361.8361.3 16.43 16.43 3.632 5 1 1 0 595.2845 1703.8696 S900s TMT10 893 (K) CSISGHGsLNSISR (H) CS(0.0)IS(0.0)GHGS(0.99)LNS(0.0)IS(0.0)R C:Carbamidomethylation,s:Phosphorylated S SRGAP2 122066.6 1 6 489.1 294.64 HUMAN 1 2.2861 0.2693 CSKIGPPSPGDDEEE-p Q02447;S73-p CSKIGPPSPGDDEEE 0.454801565801467 0.0154629506357939 -0.135333333333333 0.576333333333333 6.31160367104929 25.0373604835261 -0.135333333333333 0.576333333333333 0.233797376161423 0.00313519062372915 -1.33988903029287 5.04693378301331 Q02447 SP3 Q02447.S73.p_SP3 Q02447_S73s _1_1_73_73 Q02447 Q02447|Q02447-2|H0Y6K5 Transcription factor Sp3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29658.29658.4 31.39 31.39 19.69 7 1 1 0 1359.9321 5356.7338 S73s TMT10 69 (K) IGPPsPGDDEEEAAAAAGAPAAAGATGDLASAQLGGAPNRWEVLSATPTTIK (D) IGPPS(0.99)PGDDEEEAAAAAGAPAAAGAT(0.0)GDLAS(0.0)AQLGGAPNRWEVLS(0.0)AT(0.0)PT(0.0)T(0.0)IK K:TMT10,s:Phosphorylated S SP3 82494.4 5 1 2016.1 102.15 HUMAN 1 -6.3116 25.0374 CSLKHRKSLLLTDIS-p P21359;S2460-p CSLKHRKSLLLTDIS 0.931597855638632 0.330920212783471 0.0296666666666667 0.106 0.609853515785857 6.36116931657101 0.0296666666666667 0.106 0.868989739152674 0.231144236187847 0.172931561017686 1.34831837294218 P21359 NF1 P21359.S2460.p_NF1 P21359_S2460s _1_1_2460_2460 P21359 P21359|P21359-6|P21359-2 Neurofibromin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27540.27540.4 26.58 20.4 2.384 7 1 1 0 853.4053 3330.6336 S2460s TMT10 2460 (K) sLLLTDISMENVPMDTYPIHHGDPSYR (T) S(0.99)LLLT(0.0)DIS(0.0)MENVPMDT(0.0)Y(0.0)PIHHGDPS(0.0)Y(0.0)R s:Phosphorylated S NF1 322961 4 8 437.1 312.53 HUMAN 1 0.6099 6.3612 CSLKKTESFQNAQAG-p Q92667;S592-p CSLKKTESFQNAQAG 0.25989258768663 0.251894273184396 0.181666666666667 0.113 11.0993206868735 7.88485794640567 0.181666666666667 0.113 0.077636854485782 0.162747454791616 2.1735186723108 1.61467595886793 Q92667 AKAP1 Q92667.S592.p_AKAP1 Q92667_S592s _1_1_592_592 Q92667 Q92667 A-kinase anchor protein 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8683.8683.3 9.51 9.51 1.133 3 1 1 0 792.0818 2294.2708 S592s TMT10 589 (K) KTEsFQNAQAGSNPK (K) KT(0.0)ES(0.99)FQNAQAGS(0.0)NPK K:TMT10,s:Phosphorylated S AKAP1 98309.7 2 8 1004.1 189.36 HUMAN 1 11.0993 7.8849 CSLRSAKSSFSLLAP-p Q9NRR6;S255-p CSLRSAKSSFSLLAP 0.973664562114504 0.0310057772763477 -0.005 -0.274333333333333 0.227194924077868 20.3883064161118 -0.00500000000000001 -0.274333333333333 0.949031237640236 0.00914469780504707 -0.06694262502181 -3.95898837935504 Q9NRR6 INPP5E Q9NRR6.S255.p_INPP5E Q9NRR6_S255s _1_1_255_255 Q9NRR6 Q9NRR6 72 kDa inositol polyphosphate 5-phosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27468.27468.2 13.19 13.19 2.106 3 1 1 0 700.3819 1319.7885 S255s TMT10 255 (K) sSFSLLAPIR (S) S(0.99)S(0.0)FS(0.0)LLAPIR s:Phosphorylated S INPP5E 70888.7 2 3 3349.1 53.19 HUMAN 1 -0.2272 -20.3883 CSNPNHRTPTLTSIY-p P29590-8;T196-p CSNPNHRTPTLTSIY 0.314424474401669 0.909261012812205 0.159 0.0113333333333333 9.40174948704704 0.578160334009779 0.159 0.0113333333333333 0.114769119900609 0.875354495772431 1.87793335720851 0.164422385311335 P29590 PML P29590.8.T196.p_PML P29590-8_T196t _1_1_196_196 P29590-8 P29590-8|P29590-3|P29590-13|P29590-9|P29590-5|P29590-2 Isoform PML-2 of Protein PML HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15528.15528.4 9.79 4.79 1.152 7 1 1 0 833.9139 3252.677 T196t TMT10 183 (R) KTNNIFCSNPNHRtPTLTSIYCR (G) KT(0.0)NNIFCS(0.0)NPNHRT(0.99)PT(0.0)LT(0.0)S(0.0)IY(0.0)CR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T PML 92374.1 2 6 777.1 226.8 HUMAN 1 9.4017 0.5782 CSNRKSLSPSGLKIQ-p Q9HC77;S469-p CSNRKSLSPSGLKIQ 0.262355439427677 0.00112006726578317 -0.205333333333333 -1.066 11.0216127625129 49.4410176601282 -0.205333333333333 -1.066 0.0790385062190571 1.13736074264885e-05 -2.15989615138366 -15.3170086404314 Q9HC77 CENPJ Q9HC77.S469.p_CENPJ Q9HC77_S469s _1_1_469_469 Q9HC77 Q9HC77|F6VUX8|Q9HC77-2 Centromere protein J HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15347.15936.2 11.46 5.14 1.329 3 1 1 0 663.875 1246.7771 S469s TMT10 467 (K) SLsPSGLK (I) S(0.0)LS(0.99)PS(0.0)GLK K:TMT10,s:Phosphorylated S CENPJ 154195.7 2 4 1877.1 109.56 HUMAN 1 -11.0216 -49.441 CSNSGRLSGPAELRS-p Q96PC5;S1243-p CSNSGRLSGPAELRS 0.491524425262768 0.965883589042537 0.108333333333333 0.00666666666666667 5.67849130570223 0.21575958063925 0.108333333333333 0.00666666666666666 0.270489785456895 0.951533410454657 1.22707056874289 0.06364503238746 Q96PC5 MIA2 Q96PC5.S1243.p_MIA2 Q96PC5_S1243s_1_1_1243_1243 Q96PC5 Q96PC5|G3V599|O15320-5 Melanoma inhibitory activity protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14445.14445.3 11.59 8.04 1.66 3 1 1 0 654.3094 1879.9646 N1238n S1243s TMT10 1235 (R) FCSnSGRLsGPAELR (S) FCS(0.0)N(1.0)S(0.0)GRLS(0.99)GPAELR C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S MIA2 160460.4 5 10 569.1 269.96 HUMAN 1 5.6785 0.2158 CSPAFQVSDDEHEKM-p Q562F6;S1187-p CSPAFQVSDDEHEKM 0.806340238065947 0.00255761156315257 -0.0366666666666667 -0.773666666666667 1.80142117696189 39.6090799601063 -0.0366666666666667 -0.773666666666667 0.6604772793177 0.000109418814221185 -0.464361989147448 -9.95691087983754 Q562F6 SGOL2 Q562F6.S1187.p_SGOL2 Q562F6_S1187s _1_1_1187_1187 Q562F6 Q562F6|Q562F6-2 Shugoshin 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20510.20510.3 24.58 24.58 3.027 2 1 1 0 964.1063 2810.3343 S1187s TMT10 1174 (K) ENFALECSPAFQVsDDEHEK (M) ENFALECS(0.0)PAFQVS(0.99)DDEHEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SGO2 145877.6 2 4 3156.1 59.09 HUMAN 1 -1.8014 -39.6091 CSPRRAFSEQGPLRL-p Q8TF40;S220-p CSPRRAFSEQGPLRL 0.621652419131811 0.910976534515628 -0.110666666666667 -0.0113333333333333 3.83917422546867 0.566775117644936 -0.110666666666667 -0.0113333333333333 0.413126046975369 0.877652285739598 -0.886260048979092 -0.161359765051773 Q8TF40 FNIP1 Q8TF40.S220.p_FNIP1 Q8TF40_S220s _1_1_220_220 Q8TF40 Q8TF40|J3KNG8|Q8TF40-2 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9383.9383.3 12.01 12.01 99 1 1 1 0 490.587 1389.78 S220s TMT10 217 (R) RAFsEQGPLR (L) RAFS(1.0)EQGPLR s:Phosphorylated S FNIP1 132549.9 3 6 310.1 372.19 HUMAN 1 -3.8392 -0.5668 CSQALKQSP______-p Q5JRA6;S1906-p CSQALKQSP______ 0.729402561477133 0.0316875440772425 0.049 -0.291 2.60240043629984 20.2444911998197 0.049 -0.291 0.549237215067002 0.00945259128326913 0.638429985061957 -3.92788540644712 Q5JRA6 MIA3 Q5JRA6.S1906.p_MIA3 Q5JRA6_S1906s _1_1_1906_1906 Q5JRA6 Q5JRA6|Q5JRA6-2|Q5JRA6-4 Transport and Golgi organization protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15489.15489.4 28.91 27.36 6.968 8 1 1 0 931.1989 3641.8117 S1906s TMT10 1878 (R) DLLPSGSRDEPPPASQSTSQDCSQALKQsP (-) DLLPS(0.0)GS(0.0)RDEPPPAS(0.0)QS(0.0)T(0.0)S(0.0)QDCS(0.0)QALKQS(0.99)P C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MIA3 214383.2 12 13 378.1 336.1 HUMAN 1 2.6024 -20.2445 CSRISRKSPGDPAKP-p Q8NCD3;S201-p CSRISRKSPGDPAKP 0.109309157091382 0.00576997804828134 0.336666666666667 -0.525333333333333 20.1334616960102 32.3768765548915 0.336666666666667 -0.525333333333333 0.00969736696566351 0.000578511963521274 3.90765140314536 -7.17660362956636 Q8NCD3 HJURP Q8NCD3.S201.p_HJURP Q8NCD3_S201s _1_1_201_201 Q8NCD3 Q8NCD3|Q8NCD3-2|Q8NCD3-3 Holliday junction recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4177.4177.3 13 7.38 12.394 3 1 1 0 645.0154 1853.0645 S201s Hydrogen 200 (R) KsPGDPAKPASSPR (E) KS(0.99)PGDPAKPAS(0.0)S(0.0)PR K:TMT10-Lys-Only,s:Phosphorylated S HJURP 84336.4 6 4 596.1 263.83 HUMAN 1 20.1335 -32.3769 CSRTAEPSPGQDGTS-p Q9Y2D5-4;S155-p CSRTAEPSPGQDGTS 0.652353452431113 0.258877202422582 0.0733333333333333 0.177 3.47955284447846 7.73266323214373 0.0733333333333333 0.177 0.448791595749151 0.168551909438649 0.816239735334706 1.58826190080618 Q9Y2D5 AKAP2 Q9Y2D5.4.S155.p_AKAP2 Q9Y2D5-4_S155s _1_1_155_155 Q9Y2D5-4 Q9Y2D5-4|Q9Y2D5-6|B1ALY0|Q8IXS6-2 Isoform 3 of A-kinase anchor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4998.4998.2 11.68 11.68 3.666 4 1 1 0 806.3644 1531.755 S155s TMT10 151 (R) TAEPsPGQDGTSR (A) T(0.0)AEPS(0.99)PGQDGT(0.0)S(0.0)R s:Phosphorylated S AKAP2 122582.3 2 6 779.1 226.39 HUMAN 1 3.4796 7.7327 CSSDTKGSPLASISK-p Q96L73;S822-p CSSDTKGSPLASISK 0.811315890480316 0.013701487429064 -0.0353333333333333 -0.477 1.74518195480899 25.8806156265063 -0.0353333333333333 -0.477 0.669085787010211 0.00258189417282458 -0.451600889049719 -5.26345016211757 Q96L73 NSD1 Q96L73.S822.p_NSD1 Q96L73_S822s _1_1_822_822 Q96L73 Q96L73|Q96L73-3|Q96L73-2 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14957.14957.3 13.42 9.66 2.198 6 1 1 0 822.4189 2385.2721 S822s TMT10 814 (K) CCSSDTKGsPLASISK (S) CCS(0.0)S(0.0)DT(0.0)KGS(0.99)PLAS(0.0)IS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NSD1 302295.2 1 6 601.1 263.26 HUMAN 1 -1.7452 -25.8806 CSSEVVLSGDDEEYQ-p Q09666;S115-p CSSEVVLSGDDEEYQ 0.351909559122908 0.135810016596193 0.143 0.155333333333333 8.42734116802431 11.4267597768435 0.143 0.155333333333333 0.143636853588407 0.0719985951229004 1.70922419794122 2.22999964155933 Q09666 AHNAK Q09666.S115.p_AHNAK Q09666_S115s _1_1_115_115 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22406.22406.4 24.78 24.78 3.041 9 1 1 0 892.423 3486.6987 S115s TMT10 103 (R) EVFSSCSSEVVLsGDDEEYQRIYTTK (I) EVFS(0.0)S(0.0)CS(0.0)S(0.0)EVVLS(0.99)GDDEEY(0.0)QRIY(0.0)T(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AHNAK 629603.7 13 5 1.1 4313.36 HUMAN 1 8.4273 11.4268 CSTKQGNSQESSNTI-p Q9BX63;S226-p CSTKQGNSQESSNTI 0.952348791432562 0.00212561131617408 -0.00966666666666667 -0.926 0.420825453166381 41.5288471528564 -0.00966666666666666 -0.926 0.90764799929142 7.03258977218523e-05 -0.121541678368069 -10.8408543742189 Q9BX63 BRIP1 Q9BX63.S226.p_BRIP1 Q9BX63_S226s _1_1_226_226 Q9BX63 Q9BX63|Q9BX63-2|J3QSE8 Fanconi anemia group J protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7091.7091.4 14.36 14.36 3.265 4 1 1 0 547.7932 2108.1915 S226s TMT10 223 (K) QGNsQESSNTIKK (D) QGNS(0.99)QES(0.0)S(0.0)NT(0.0)IKK K:TMT10,s:Phosphorylated S BRIP1 142871.9 4 5 837.1 214.97 HUMAN 1 -0.4208 -41.5288 CSTSESLSPVKQAPR-p O95297;S210-p CSTSESLSPVKQAPR 0.871044768133441 0.00289947579470878 -0.0376666666666667 -1.05933333333333 1.17292951259256 38.3491359004638 -0.0376666666666667 -1.05933333333333 0.763320715552215 0.000146246812734073 -0.316710639390368 -9.41305696924013 O95297 MPZL1 O95297.S210.p_MPZL1 O95297_S210s _1_1_210_210 O95297 O95297|O95297-2|O95297-4 Myelin protein zero-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14463.14463.2 14.3 11.55 1.169 7 1 1 0 1085.0066 2089.0524 S210s TMT10 199 (R) DYTGCSTSESLsPVK (Q) DY(0.0)T(0.0)GCS(0.0)T(0.0)S(0.0)ES(0.0)LS(0.99)PVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MPZL1 29252.8 2 1 2618.1 76.62 HUMAN 1 -1.1729 -38.3491 CSVLPGFTFIQHLPL-p Q9BUJ2;T398-p CSVLPGFTFIQHLPL 0.807971859248465 0.147144465082663 0.0346666666666667 -0.179333333333333 1.77826580312175 10.9581518839553 0.0346666666666667 -0.179333333333333 0.664008164953278 0.0802019285632075 0.459117564685208 -2.14781543036907 Q9BUJ2 HNRNPUL1 Q9BUJ2.T398.p_HNRNPUL1 Q9BUJ2_T398t _1_1_398_398 Q9BUJ2 Q9BUJ2|Q9BUJ2-2|B7Z4B8|A0A0A0MRA5|Q9BUJ2-4|Q9BUJ2-3 Heterogeneous nuclear ribonucleoprotein U-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.33556.33556.3 15.1 15.1 1.187 4 1 1 0 957.4782 2790.4486 T398t TMT10 387 (R) AEPYCSVLPGFtFIQHLPLSER (I) AEPY(0.0)CS(0.0)VLPGFT(0.99)FIQHLPLS(0.0)ER C:Carbamidomethylation,t:Phosphorylated T HNRNPUL1 96307.3 1 2 999.1 190.09 HUMAN 1 1.7783 -10.9582 CSWKLIQSPVTNKKH-p Q7Z7B1;S416-p CSWKLIQSPVTNKKH 0.561302634517717 0.708282647072375 0.166666666666667 0.071 4.61679144878492 2.05979148000912 0.166666666666667 0.071 0.345398824442117 0.622330164702612 1.03334046178125 0.52194167850824 Q7Z7B1 PIGW Q7Z7B1.S416.p_PIGW Q7Z7B1_S416s _1_1_416_416 Q7Z7B1 Q7Z7B1 Phosphatidylinositol-glycan biosynthesis class W protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14240.14240.3 11.05 11.05 2.638 2 1 1 0 632.3829 1815.1671 S416s TMT10 413 (K) LIQsPVTNKK (H) LIQS(0.99)PVT(0.0)NKK K:TMT10,s:Phosphorylated S PIGW 57565.6 1 1 6548.1 11.05 HUMAN 1 4.6168 2.0598 CTDSLPETDDSLLCD-p O14686-3;T1267-p CTDSLPETDDSLLCD 0.422287751565595 0.0339496074217004 0.118 0.365333333333333 6.89676407307094 19.8037587790292 0.118 0.365333333333333 0.204325980992208 0.0104622265994295 1.44292993432634 3.83341864910387 O14686 KMT2D O14686.3.T1267.p_KMT2D O14686-3_T1267tS1270s_2_2_1267_1270 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32413.32413.3 16.9 16.9 4.969 6 2 2 0 1072.1432 3054.5012 T1267t S1270s TMT10 1259 (R) LCTDSLPEtDDsLLCDAGTAISGGK (A) LCT(0.0)DS(0.0)LPET(0.99)DDS(0.99)LLCDAGT(0.0)AIS(0.0)GGK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S KMT2D 600227.3 3 50 17.1 1042.08 HUMAN 1 6.8968 19.8038 CTERFVCSPDEVMDT-p P33176;S175-p CTERFVCSPDEVMDT 0.516563806802918 0.784583305004166 0.086 0.0366666666666667 5.296792086696 1.46069166509163 0.086 0.0366666666666667 0.295338994069245 0.714382543184741 1.15817932672986 0.385713889684137 P33176 KIF5B P33176.S175.p_KIF5B P33176_S175s _1_1_175_175 P33176 P33176 Kinesin-1 heavy chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29651.29651.3 10.39 10.39 6.022 2 1 1 0 794.0341 2300.1191 S175s TMT10 172 (R) FVCsPDEVMDTIDEGK (S) FVCS(0.99)PDEVMDT(0.0)IDEGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIF5B 110424.6 1 2 2011.1 102.48 HUMAN 1 5.2968 1.4607 CTESRWKSEEEVESD-p Q76N32;S472-p CTESRWKSEEEVESD 0.739118396287836 0.209461515579807 0.06 0.162333333333333 2.48888378735185 8.93082941086457 0.06 0.162333333333333 0.56378253916283 0.127913699264143 0.614539470621617 1.79574846086944 Q76N32 CEP68 Q76N32.S472.p_CEP68 Q76N32_S472s _1_1_472_472 Q76N32 Q76N32|Q76N32-2 Centrosomal protein of 68 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22277.22277.3 15 11.83 2.208 3 1 1 0 935.4579 2724.3769 S472s TMT10 470 (R) WKsEEEVESDDEYLALPAR (L) WKS(0.99)EEEVES(0.0)DDEY(0.0)LALPAR K:TMT10,s:Phosphorylated S CEP68 82013.7 1 5 2056.1 100.31 HUMAN 1 2.4889 8.9308 CTGDFSPSPEKLVKS-p Q5VWN6;S1541-p CTGDFSPSPEKLVKS 0.163512600140645 0.00273807456007999 1.02533333333333 -0.941666666666667 15.7528413563145 38.8410580962023 1.02533333333333 -0.941666666666667 0.0265898485914464 0.000130585269709587 3.02087578538172 -9.62210927721737 Q5VWN6 FAM208B Q5VWN6.S1541.p_FAM208B Q5VWN6_S1539sS1541s_2_2_1539_1541 Q5VWN6 Q5VWN6|Q5VWN6-2 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13897.13905.3 9.54 9.54 9.539 3 2 2 0 614.9311 1682.846 S1539s S1541s TMT10 1534 (K) CTGDFsPsPEK (L) CT(0.0)GDFS(0.99)PS(0.99)PEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM208B 271861.7 3 20 275.1 391.61 HUMAN 1 15.7528 -38.8411 CTKLKTQSQEEELMK-p Q9NY74;S186-p CTKLKTQSQEEELMK 0.674071856956608 0.02166622347793 0.0656666666666667 -0.359 3.2111337466464 22.7557515294211 0.0656666666666667 -0.359 0.477404628612889 0.00530181838820709 0.762979187890213 -4.49196154002952 Q9NY74 ETAA1 Q9NY74.S186.p_ETAA1 Q9NY74_S186s _1_1_186_186 Q9NY74 Q9NY74 Ewing's tumor-associated antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16170.16170.3 13.15 13.15 1.62 2 1 1 0 744.4042 2151.2298 S186s TMT10 182 (K) LKTQsQEEELMK (L) LKT(0.0)QS(0.99)QEEELMK K:TMT10,s:Phosphorylated S ETAA1 104522.7 1 2 2527.1 79.86 HUMAN 1 3.2111 -22.7558 CTLDKLSSPAAFLPA-p Q86YS7-3;S250-p CTLDKLSSPAAFLPA 0.687777093309933 0.152022468714386 0.068 -0.164 3.05232389862594 10.7581076410959 0.068 -0.164 0.495185147597621 0.0839825845582659 0.731019980690658 -2.11285526099204 Q86YS7 C2CD5 Q86YS7.3.S250.p_C2CD5 Q86YS7-3_S250sS260s_2_2_250_260 Q86YS7-3 Q86YS7-5|Q86YS7-4|Q86YS7-3|Q86YS7-2 Isoform 3 of C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29153.29153.5 17.15 17.15 1.168 6 2 2 0 705.7575 3364.8212 S250s S260s TMT10 238 (R) AIGTACTLDKLSsPAAFLPACNsPSK (E) AIGT(0.0)ACT(0.0)LDKLS(0.0)S(0.99)PAAFLPACNS(0.99)PS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C2CD5 117622.7 4 17 349.1 351.16 HUMAN 1 3.0523 -10.7581 CTLNSAISDIEVDKK-p P26640;S486-p CTLNSAISDIEVDKK 0.486350322519858 0.0528910826295034 -0.122333333333333 0.235 5.76614834865572 17.0296599057159 -0.122333333333333 0.235 0.265085007037753 0.0198168220447551 -1.24279059161381 3.26598478382803 P26640 VARS P26640.S486.p_VARS P26640_S486s _1_1_486_486 P26640 P26640|P26640-2 Valine--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.31888.31888.4 21.76 21.76 1.797 4 1 1 0 765.6573 2979.6428 S486s TMT10 474 (R) LVNWSCTLNSAIsDIEVDKK (E) LVNWS(0.0)CT(0.0)LNS(0.0)AIS(0.99)DIEVDKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VARS 141728.6 1 2 2729.1 72.52 HUMAN 1 -5.7661 17.0297 CTLPSPPSPLASLAP-p Q9UER7;S671-p CTLPSPPSPLASLAP 0.420161345352907 0.482282159723259 0.112666666666667 0.0726666666666667 6.951303792789 4.22699515470844 0.112666666666667 0.0726666666666667 0.201776052210299 0.377833520196028 1.45248647877182 0.960109311271755 Q9UER7 DAXX Q9UER7.S671.p_DAXX Q9UER7_S671s _1_1_671_671 Q9UER7 Q9UER7|Q9UER7-3 Death domain-associated protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30662.30662.4 23.61 22.24 3.006 13 1 1 0 1177.6007 4627.4061 S671s TMT10 663 (K) ICTLPSPPsPLASLAPVADSSTRVDSPSHGLVTSSLCIPSPAR (L) ICT(0.0)LPS(0.0)PPS(0.99)PLAS(0.0)LAPVADS(0.0)S(0.0)T(0.0)RVDS(0.0)PS(0.0)HGLVT(0.0)S(0.0)S(0.0)LCIPS(0.0)PAR C:Carbamidomethylation,s:Phosphorylated S DAXX 82112.9 14 9 315.1 368.97 HUMAN 1 6.9513 4.227 CTMKKGPSGYGFNLH-p O14745;S162-p CTMKKGPSGYGFNLH 0.360752463718534 0.803586709210602 0.141 0.0296666666666667 8.23189920332997 1.32907931173275 0.141 0.0296666666666667 0.150248477420057 0.736363187225928 1.67536676794795 0.354465962906793 O14745 SLC9A3R1 O14745.S162.p_SLC9A3R1 O14745_S162s _1_1_162_162 O14745 O14745|O14745-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14056.14261.4 13.78 7.13 1.901 3 1 1 0 569.3026 2194.2224 S162s TMT10 159 (K) KGPsGYGFNLHSDK (S) KGPS(0.99)GY(0.0)GFNLHS(0.0)DK K:TMT10,s:Phosphorylated S SLC9A3R1 39153 2 3 534.1 279.04 HUMAN 1 8.2319 1.3291 CTNSEGSSQPEEQLK-p Q9UGU0;S505-p CTNSEGSSQPEEQLK 0.571358919570234 0.00840448513471 0.0793333333333333 0.453666666666667 4.47587021179126 29.4851347277857 0.0793333333333333 0.453666666666667 0.356790250748606 0.00112586554150568 1.00706791913786 6.26728110487009 Q9UGU0 TCF20 Q9UGU0.S505.p_TCF20 Q9UGU0_S505s _1_1_505_505 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9381.9381.3 14.7 14.7 1.157 5 1 1 0 954.7961 2782.4132 S505s TMT10 494 (K) KADSCTNSEGSsQPEEQLK (S) KADS(0.0)CT(0.0)NS(0.0)EGS(0.0)S(0.99)QPEEQLK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TCF20 213250.7 2 4 197.1 457.96 HUMAN 1 4.4759 29.4851 CTSSEPLTL______-p Q969K7;T221-p CTSSEPLTL______ 0.858446754391511 0.805891684538003 -0.0293333333333333 -0.0303333333333333 1.29263844183114 1.312112987525 -0.0293333333333333 -0.0303333333333333 0.742567873264428 0.739245519943938 -0.345754318875514 -0.350398675415169 Q969K7 TMEM54 Q969K7.T221.p_TMEM54 Q969K7_T221t _1_1_221_221 Q969K7 Q969K7|Q969K7-2|Q969K7-3 Transmembrane protein 54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29019.29019.2 12.48 10.7 4.764 5 1 1 0 872.9181 1664.8614 T221t TMT10 210 (R) DLLSCTSSEPLtL (-) DLLS(0.0)CT(0.0)S(0.0)S(0.0)EPLT(0.99)L C:Carbamidomethylation,t:Phosphorylated T TMEM54 24342.3 1 2 6305.1 12.48 HUMAN 1 -1.2926 -1.3121 CTSSGPDSPYPAKGL-p Q96H55;S685-p CTSSGPDSPYPAKGL 0.760364767758717 0.021516816782045 0.0436666666666667 -0.326333333333333 2.28184903007953 22.7954158738383 0.0436666666666667 -0.326333333333333 0.591309827513062 0.00525361704857705 0.570352793498248 -4.5012463263506 Q96H55 MYO19 Q96H55.S685.p_MYO19 Q96H55_S685s _1_1_685_685 Q96H55 Q96H55|Q96H55-4 Unconventional myosin-XIX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8015.8015.3 17.81 14.62 3.388 5 1 1 0 803.4 2328.2171 S685s TMT10 674 (R) RLHPCTSSGPDsPYPAK (G) RLHPCT(0.0)S(0.0)S(0.0)GPDS(0.99)PY(0.0)PAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MYO19 110844.7 4 1 3149.1 59.18 HUMAN 1 2.2818 -22.7954 CTSSSSLSPPRGDRT-p Q96LT9;S21-p CTSSSSLSPPRGDRT 0.473269822909038 0.0391792782096996 0.131 0.292 5.98471132232735 18.8894764879816 0.131 0.292 0.252074472920925 0.0129137493056512 1.28183953918042 3.64140051843093 Q96LT9 RNPC3 Q96LT9.S21.p_RNPC3 Q96LT9_S21s _1_1_21_21 Q96LT9 Q96LT9|Q96LT9-2 RNA-binding protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5390.5601.3 10 6.38 1.171 6 1 1 0 624.9541 1792.8809 S21s TMT10 13 (R) GCTSSSSLsPPRGDR (T) GCT(0.0)S(0.0)S(0.0)S(0.0)S(0.0)LS(0.99)PPRGDR C:Carbamidomethylation,s:Phosphorylated S RNPC3 59030.5 3 1 1949.1 105.79 HUMAN 1 5.9847 18.8895 CTSTAIASPEKKKKK-p Q9Y2X3;S514-p CTSTAIASPEKKKKK 0.476849608580608 0.770110846179017 -0.212333333333333 0.0283333333333334 5.918861122404 1.56763133083399 -0.212333333333333 0.0283333333333334 0.255925692887511 0.697006562183248 -1.27009586451026 0.41072511496451 Q9Y2X3 NOP58 Q9Y2X3.S514.p_NOP58 Q9Y2X3_S514s _1_1_514_514 Q9Y2X3 Q9Y2X3 Nucleolar protein 58 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14180.14180.3 23.72 20.6 1.155 5 1 1 0 1117.2313 3269.7178 S514s TMT10 495 (K) HIKEEPLSEEEPCTSTAIAsPEK (K) HIKEEPLS(0.0)EEEPCT(0.0)S(0.0)T(0.0)AIAS(0.99)PEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NOP58 60090.6 10 9 481.1 298.21 HUMAN 1 -5.9189 1.5676 CTVDEVESLIKRHEA-p O15020;S2050-p CTVDEVESLIKRHEA 0.528105036099951 0.0458622402940931 0.088 0.275333333333333 5.13121972638998 17.9098701970892 0.088 0.275333333333333 0.306816016728841 0.0161812839990562 1.12805132513716 3.44124820159357 O15020 SPTBN2 O15020.S2050.p_SPTBN2 O15020_S2050s _1_1_2050_2050 O15020 O15020 Spectrin beta chain, non-erythrocytic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30486.30486.3 18.48 17.06 4.637 3 1 1 0 763.3868 2208.1834 S2050s TMT10 2038 (R) SAELGCTVDEVEsLIK (R) S(0.0)AELGCT(0.0)VDEVES(0.99)LIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SPTBN2 272689.3 1 12 781.1 225.92 HUMAN 1 5.1312 17.9099 CVAQNQMSPKGPPLV-p Q12766;S403-p CVAQNQMSPKGPPLV 0.570565701134658 0.684351347376926 0.102 0.0583333333333333 4.48450542710825 2.25559711952658 0.102 0.0583333333333333 0.356081538156224 0.594894957926223 1.00868225090563 0.564621503063478 Q12766 HMGXB3 Q12766.S403.p_HMGXB3 Q12766_S403s _1_1_403_403 Q12766 Q12766 HMG domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21103.21103.3 11.5 11.5 11.502 2 1 1 0 843.4106 2448.2449 S403s TMT10 389 (R) SCPQLELCVAQNQMsPK (G) S(0.0)CPQLELCVAQNQMS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HMGXB3 170784 1 1 5752.1 16.56 HUMAN 1 4.4845 2.2556 CVDMWKRSPCNLAIP-p Q8NEM7-3;S296-p CVDMWKRSPCNLAIP 0.797289518920796 0.460590736426884 0.0393333333333333 -0.07 1.89912685545147 4.48959539707852 0.0376740911167395 -0.07 0.645784050197076 0.355664451887338 0.486345235859067 -1.00944679520851 Q8NEM7 SUPT20H Q8NEM7.3.S296.p_SUPT20H Q8NEM7-3_S296s _1_1_296_296 Q8NEM7-3 Q8NEM7-3 Isoform 3 of Transcription factor SPT20 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23029.23029.4 17.23 12.54 6.465 2 1 1 0 911.4653 3562.8423 S296s TMT10 286 (K) AGNCVDMWKRsPCNLAIPSEVDVEK (Y) AGNCVDMWKRS(0.99)PCNLAIPS(0.0)EVDVEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SUPT20H 89009.7 2 1 1696.1 120.52 HUMAN 1 1.8991 -4.4896 CVEPNCRSKRMLAIK-p J3KQN4;S115-p CVEPNCRSKRMLAIK 0.134264480831341 0.308934503974602 0.257333333333333 -0.124666666666667 17.9097479095655 6.74281170272687 0.257333333333333 -0.124666666666667 0.0161817396339056 0.211699011296591 3.44402301588061 -1.41553754013162 J3KQN4 RPL36A J3KQN4.S115.p_RPL36A J3KQN4_S115s _1_1_115_115 J3KQN4 J3KQN4|H7BZ11|H0Y5B4|P83881|Q969Q0 60S ribosomal protein L36a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10552.10552.3 9.72 9.72 99 1 1 1 0 643.9824 1849.9665 S115s TMT10 106 (R) LECVEPNCRsK (R) LECVEPNCRS(1.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RPL36A 16663.2 1 1 6756.1 9.72 HUMAN 1 17.9097 -6.7428 CVGDMADTPRDAGLK-p Q9UHD8;T255-p CVGDMADTPRDAGLK 0.315167340543659 0.0148369648359156 0.331333333333333 -0.394333333333333 9.38321546928003 25.3141887720846 0.331333333333333 -0.394333333333333 0.115259956959859 0.00294158310700829 1.87472238332276 -5.11730188437056 Q9UHD8 SEPT9 Q9UHD8.T255.p_SEPT9 Q9UHD8_T255t _1_1_255_255 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2|Q9UHD8-7|Q9UHD8-3 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14886.14886.4 22.63 19.12 4.134 4 1 1 0 779.6177 3035.4814 T255t TMT10 238 (R) SQEATEAAPSCVGDMADtPRDAGLK (Q) S(0.0)QEAT(0.0)EAAPS(0.0)CVGDMADT(0.99)PRDAGLK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T SEPT9 65685.6 1 19 110.1 572.91 HUMAN 1 9.3832 -25.3142 CVGSRTLSKDDVNYK-p P48651;S11-p CVGSRTLSKDDVNYK 0.740534411711138 0.423027266800273 0.0483333333333333 -0.158 2.47513943506329 4.9750533019803 0.0483333333333333 -0.158 0.565569598558015 0.318049465313319 0.61163112326567 -1.0992632557183 P48651 PTDSS1 P48651.S11.p_PTDSS1 P48651_S11s _1_1_11_11 P48651 P48651|J3KNR6 Phosphatidylserine synthase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13382.13382.3 12.01 12.01 1.108 3 1 1 0 650.6898 1870.0889 S11s TMT10 9 (R) TLsKDDVNYK (M) T(0.0)LS(0.99)KDDVNY(0.0)K K:TMT10,s:Phosphorylated S PTDSS1 56211.2 3 1 2275.1 90.14 HUMAN 1 2.4751 -4.9751 CVLPEEDSGELAKPK-p Q9Y3F4-2;S325-p CVLPEEDSGELAKPK 0.649911024845248 0.113130212353909 -0.066 -0.213666666666667 3.51005157345873 12.4833791198742 -0.066 -0.213666666666667 0.445650956159489 0.0564497584636633 -0.822234967880023 -2.41711422153177 Q9Y3F4 STRAP Q9Y3F4.2.S325.p_STRAP Q9Y3F4-2_S325s _1_1_325_325 Q9Y3F4-2 Q9Y3F4-2 Isoform 2 of Serine-threonine kinase receptor-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17161.17161.3 19.42 19.42 99 1 1 1 0 813.7673 2359.3146 S325s TMT10 318 (K) CVLPEEDsGELAKPK (I) CVLPEEDS(1.0)GELAKPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S STRAP 40119.4 4 2 2222.1 92.92 HUMAN 1 -3.5101 -12.4834 CVLQGLQTPSCKIQK-p P13489;T82-p CVLQGLQTPSCKIQK 0.505955843363506 0.0620025025127231 0.0896666666666667 -0.274333333333333 5.46209354189233 16.0749797513979 0.089013421699504 -0.274333333333333 0.284309024881458 0.0246889161587158 1.18810567090391 -3.08041118354945 P13489 RNH1 P13489.T82.p_RNH1 P13489_T82t _1_1_82_82 P13489 P13489|E9PMN0 Ribonuclease inhibitor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22412.22468.3 15.61 15.61 2 3 1 1 0 979.4817 2856.4748 T82t TMT10 65 (R) SNELGDVGVHCVLQGLQtPSCK (I) S(0.0)NELGDVGVHCVLQGLQT(0.99)PS(0.0)CK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T RNH1 51798.3 1 1 5887.1 15.61 HUMAN 1 5.4621 -16.075 CVPGELPSPGKVRSG-p Q99612;S171-p CVPGELPSPGKVRSG 0.87584124854734 0.0703316638520127 -0.0276666666666667 -0.268666666666667 1.12889907693816 15.3306396474219 -0.0276666666666667 -0.268666666666667 0.771098915477889 0.0293046160259 -0.305906043746686 -2.93872630261845 Q99612 KLF6 Q99612.S171.p_KLF6 Q99612_S171s _1_1_171_171 Q99612 Q99612|Q99612-2|Q99612-3 Krueppel-like factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24013.24013.3 9.22 5.73 2.246 2 1 1 0 749.6977 2167.1055 S171s Hydrogen 157 (R) EPSQLWGCVPGELPsPGK (V) EPS(0.0)QLWGCVPGELPS(0.99)PGK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S KLF6 32548.7 1 2 3290.1 54.84 HUMAN 1 -1.1289 -15.3306 CVPQESRSPQRSPLQ-p Q8IWB9;S790-p CVPQESRSPQRSPLQ 0.574247698827796 0.0402110913783093 -0.075 -0.249 4.43436482077095 18.7151206990483 -0.075 -0.249 0.360216430148437 0.0134427440610079 -0.999300308970817 -3.60536527433715 Q8IWB9 TEX2 Q8IWB9.S790.p_TEX2 Q8IWB9_S790s _1_1_790_790 Q8IWB9 Q8IWB9-2|A0A087WVA8 Testis-expressed protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9964.9964.4 17.57 17.57 1.381 7 1 1 0 806.3994 3142.6315 S790s TMT10 783 (R) CVPQESRsPQRSPLQSAESSPTAGK (K) CVPQES(0.0)RS(0.99)PQRS(0.0)PLQS(0.0)AES(0.0)S(0.0)PT(0.0)AGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TEX2 125928 4 16 300.1 376.78 HUMAN 1 -4.4344 -18.7151 CVVQEGKSPRQCLKE-p Q86WW8;S37-p CVVQEGKSPRQCLKE 0.322168845598486 0.0117494802123878 -0.196 0.45 9.21078811030879 26.9772138719133 -0.196 0.45 0.119928165083373 0.00200575836827229 -1.84485760780335 5.55495442203501 Q86WW8 COA5 Q86WW8.S37.p_COA5 Q86WW8_S37s _1_1_37_37 Q86WW8 Q86WW8|B9A057 Cytochrome c oxidase assembly factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21399.21399.3 17.97 11.18 1.119 2 1 1 0 967.1413 2819.4432 S37s TMT10 19 (K) EDLGACLLQSDCVVQEGKsPR (Q) EDLGACLLQS(0.0)DCVVQEGKS(0.99)PR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S COA5 8717.8 4 1 4404.1 31.93 HUMAN 1 -9.2108 26.9772 CVWSPLASPSTSILK-p Q5UIP0;S2176-p CVWSPLASPSTSILK 0.439239818610708 0.00129606731851265 -0.128333333333333 -1.30166666666667 6.58111488165997 47.1492418563023 -0.128333333333333 -1.30166666666667 0.219729573041691 1.92786142873184e-05 -1.3874713663149 -13.8667273417088 Q5UIP0 RIF1 Q5UIP0.S2176.p_RIF1 Q5UIP0_S2176s _1_1_2176_2176 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30118.30118.3 14.41 14.41 1.192 5 1 1 0 728.7201 2104.1877 S2176s TMT10 2169 (R) CVWSPLAsPSTSILK (R) CVWS(0.0)PLAS(0.99)PS(0.0)T(0.0)S(0.0)ILK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RIF1 276628.8 3 29 29.1 922.06 HUMAN 1 -6.5811 -47.1492 CWAPAPGSPARMHPL-p Q96RR4;S572-p CWAPAPGSPARMHPL 0.301887758255495 0.0206673632284931 0.227333333333333 -0.38 9.74807841799543 23.0532983989546 0.227333333333333 -0.38 0.10597225069255 0.00495074046956619 1.93797442017406 -4.5619138130969 Q96RR4 CAMKK2 Q96RR4.S572.p_CAMKK2 Q96RR4_S572s _1_1_572_572 Q96RR4 Q96RR4|Q96RR4-4 Calcium/calmodulin-dependent protein kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15108.15108.3 15.45 15.45 6.646 3 1 1 0 732.3264 2114.9949 S572s TMT10 558 (R) GSPCVESCWAPAPGsPAR (M) GS(0.0)PCVES(0.0)CWAPAPGS(0.99)PAR C:Carbamidomethylation,s:Phosphorylated S CAMKK2 65600.5 1 6 1793.2 114.32 HUMAN 1 9.7481 -23.0533 CWHMEPLSPIPIDHW-p Q8IY92;S1434-p CWHMEPLSPIPIDHW 0.256105749737423 0.642221827133025 -0.173666666666667 -0.05 11.2368349767636 2.6205061537846 -0.173666666666667 -0.05 0.0752170856535691 0.546952213968369 -2.19765389807872 -0.64213568894702 Q8IY92 SLX4 Q8IY92.S1434.p_SLX4 Q8IY92_S1434s _1_1_1434_1434 Q8IY92 Q8IY92 Structure-specific endonuclease subunit SLX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.33037.33037.5 7.69 7.13 7.689 3 1 1 0 872.4152 4278.0296 S1434s TMT10 1412 (R) SPPLDSDPPIPIDDCCWHMEPLsPIPIDHWNLER (T) S(0.0)PPLDS(0.0)DPPIPIDDCCWHMEPLS(0.99)PIPIDHWNLER C:Carbamidomethylation,s:Phosphorylated S SLX4 201834.1 1 20 218.1 430.83 HUMAN 1 -11.2368 -2.6205 CWQYRQLSALHRAPR-p P61313;S34-p CWQYRQLSALHRAPR 0.299702423811655 0.072756626642744 -0.183 -0.223 9.83983262778635 15.1239710034956 -0.183 -0.223 0.103756840176791 0.0307328544851576 -1.95389688597446 -2.89982306840416 P61313 RPL15 P61313.S34.p_RPL15 P61313_S34s _1_1_34_34 P61313 P61313|P61313-2|E7ERA2 60S ribosomal protein L15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7747.7747.3 10.1 5.45 99 1 1 1 0 378.5388 1053.6366 S34s TMT10 32 (R) QLsALHR (A) QLS(1.0)ALHR s:Phosphorylated S RPL15 24259.7 3 1 3377.1 52.5 HUMAN 1 -9.8398 -15.124 CWRILEHYQWDLSAA-p Q13470-2;Y646-p CWRILEHYQWDLSAA 0.111684031420699 0.020794817371563 0.564666666666667 -0.351 19.8821009060234 23.0040215753457 0.564666666666667 -0.351 0.0102751911397789 0.0050072334808716 3.85369351772295 -4.55028075548165 Q13470 TNK1 Q13470.2.Y646.p_TNK1 Q13470-2_Y646y _1_1_646_646 Q13470-2 Q13470|Q13470-2 Isoform 2 of Non-receptor tyrosine-protein kinase TNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20856.20856.3 14.49 14.49 14.494 3 1 1 0 666.6631 1918.002 Y646y TMT10 642 (R) ILEHyQWDLSAASR (Y) ILEHY(0.99)QWDLS(0.0)AAS(0.0)R y:Phosphorylated Y TNK1 72548.5 1 8 1259.1 161.29 HUMAN 1 19.8821 -23.004 CYDANDASDEEEFDR-p O15018;S971-p CYDANDASDEEEFDR 0.755115471714797 0.273761175067473 0.0473333333333333 0.118333333333333 2.33100188986871 7.4117532882263 0.0473333333333333 0.118333333333333 0.584655192335104 0.181478286971983 0.580918093531099 1.53246453866885 O15018 PDZD2 O15018.S971.p_PDZD2 O15018_S971s _1_1_971_971 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24135.24135.5 25.53 23.72 2.169 4 1 1 0 1000.6532 4919.2686 S971s TMT10 962 (K) VGCYDANDAsDEEEFDREGDCISLPGALPGPIRPLSEDDPRR (V) VGCY(0.0)DANDAS(0.99)DEEEFDREGDCIS(0.0)LPGALPGPIRPLS(0.0)EDDPRR C:Carbamidomethylation,s:Phosphorylated S PDZD2 304146 3 11 85.1 628.64 HUMAN 1 2.331 7.4118 CYLLRQKSLHLPQKD-p P15822;S1952-p CYLLRQKSLHLPQKD 0.730031357534783 0.0341740693197925 -0.136333333333333 0.497333333333333 2.59170385012864 19.7546606583646 -0.136333333333333 0.497333333333333 0.550591642614761 0.0105811759015879 -0.636188526789682 3.82297318818417 P15822 HIVEP1 P15822.S1952.p_HIVEP1 P15822_S1952s _1_1_1952_1952 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14716.14716.3 11.29 8.93 99 1 1 1 0 454.2632 1280.8091 S1952s TMT10 1952 (K) sLHLPQK (D) S(1.0)LHLPQK K:TMT10,s:Phosphorylated S HIVEP1 299483.8 1 29 82.1 631.69 HUMAN 1 -2.5917 19.7547 CYVDPRGSPALLPST-p Q9UGR2;S233-p CYVDPRGSPALLPST 0.970985350453234 0.290271723617999 0.00766666666666666 0.241 0.251385478628404 7.08925607779503 0.00766666666666666 0.241 0.943759751677955 0.195467425188849 0.0738804539026234 1.47621507990633 Q9UGR2 ZC3H7B Q9UGR2.S233.p_ZC3H7B Q9UGR2_S233s _1_1_233_233 Q9UGR2 Q9UGR2|Q9UGR2-2 Zinc finger CCCH domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37666.37666.3 24.78 24.78 2.224 6 1 1 0 1117.9263 3271.7962 S233s TMT10 232 (R) GsPALLPSTPTMPLFPHVLDLLAPLDSSR (T) GS(0.99)PALLPS(0.0)T(0.0)PT(0.0)MPLFPHVLDLLAPLDS(0.0)S(0.0)R s:Phosphorylated S ZC3H7B 113458.7 7 1 3143.1 59.44 HUMAN 1 0.2514 7.0893 DAAGDFRSGDEEFKG-p O43823;S339-p DAAGDFRSGDEEFKG 0.294750125885592 0.0404229024901861 0.164333333333333 0.422 10.0092497615827 18.6825837677926 0.164333333333333 0.422 0.0997872430178585 0.013543834031732 1.98331750206173 3.598660759519 O43823 AKAP8 O43823.S339.p_AKAP8 O43823_S339s_1_1_339_339 O43823 O43823 A-kinase anchor protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18264.18264.5 16.58 16.58 4.913 4 1 1 0 879.9711 4314.8529 N330n S339s TMT10 321 (R) VDSEGDFSEnDDAAGDFRsGDEEFKGEDELCDSGR (Q) VDS(0.0)EGDFS(0.0)EN(1.0)DDAAGDFRS(0.99)GDEEFKGEDELCDS(0.0)GR K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S AKAP8 76677.5 3 6 923.1 199.94 HUMAN 1 10.0092 18.6826 DADEFGYSR______-p Q7KZF4;S909-p DADEFGYSR______ 0.170325535786342 0.207208160030084 -0.255666666666667 -0.145666666666667 15.3411986876953 8.99208912444671 -0.255666666666667 -0.145666666666667 0.0292334539964285 0.12612206927069 -2.94269160857241 -1.80634423748688 Q7KZF4 SND1 Q7KZF4.S909.p_SND1 Q7KZF4_S909s _1_1_909_909 Q7KZF4 Q7KZF4 Staphylococcal nuclease domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16305.16305.3 17.39 12.56 6.52 3 1 1 0 731.6435 2112.946 S909s TMT10 895 (R) YGDFRADDADEFGYsR (-) Y(0.0)GDFRADDADEFGY(0.0)S(0.99)R s:Phosphorylated S SND1 102679.8 2 8 1505.1 135.67 HUMAN 1 -15.3412 -8.9921 DADGDGESYTEEADD-p Q7L590;S54-p DADGDGESYTEEADD 0.712330814255611 0.128911952653925 -0.0593333333333333 -0.380666666666667 2.77103010216854 11.7288983136727 -0.0593333333333334 -0.380666666666667 0.52831992482074 0.0671599197668318 -0.673509454175218 -2.28322990679252 Q7L590 MCM10 Q7L590.S54.p_MCM10 Q7L590_S54s_1_1_54_54 Q7L590 Q7L590|Q7L590-2|Q5T670 Protein MCM10 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25560.25560.4 12.9 12.9 2.315 5 1 1 0 1149.2224 4512.9123 N36n S54s TMT10 35 (R) EnGEPDAFDELFDADGDGEsYTEEADDGETGETRDEK (E) EN(1.0)GEPDAFDELFDADGDGES(0.99)Y(0.0)T(0.0)EEADDGET(0.0)GET(0.0)RDEK K:TMT10,n:Deamidated,s:Phosphorylated S MCM10 99322.4 1 1 1720.1 119.54 HUMAN 1 -2.771 -11.7289 DADGSFGTPPGYGCA-p P11274;T432-p DADGSFGTPPGYGCA 0.178441218280072 0.0499171111566917 -0.219333333333333 -0.256333333333333 14.7801672166721 17.4042857001313 -0.219333333333333 -0.256333333333333 0.0332646745129296 0.0181790602909904 -2.83732213700868 -3.34007031666833 P11274 BCR P11274.T432.p_BCR P11274_T432t _1_1_432_432 P11274 P11274|P11274-2 Breakpoint cluster region protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21009.21009.4 20.4 17.18 1.111 4 1 1 0 923.1423 3609.5927 T432t TMT10 410 (K) TGQIWPNDGEGAFHGDADGSFGtPPGYGCAADR (A) T(0.0)GQIWPNDGEGAFHGDADGS(0.0)FGT(0.99)PPGY(0.0)GCAADR C:Carbamidomethylation,t:Phosphorylated T BCR 143843.8 8 6 642.1 254.93 HUMAN 1 -14.7802 -17.4043 DADIECMSSDEKSDN-p Q96SI9;S465-p DADIECMSSDEKSDN 0.0635370415880919 0.0266021924935104 -0.446 0.428333333333333 25.9312000098269 21.3798856597911 -0.446 0.428333333333333 0.00255199605688781 0.00727798965634597 -5.28355356317569 4.17728951302975 Q96SI9 STRBP Q96SI9.S465.p_STRBP Q96SI9_S465s _1_1_465_465 Q96SI9 Q96SI9|Q96SI9-2 Spermatid perinuclear RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26846.26846.4 20.48 20.48 1.141 6 1 1 0 998.7135 3911.8592 S465s TMT10 447 (K) VLQAMGYPTGFDADIECMsSDEKSDNESK (N) VLQAMGY(0.0)PT(0.0)GFDADIECMS(0.99)S(0.0)DEKS(0.0)DNES(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S STRBP 74335.9 2 1 5326.1 20.48 HUMAN 1 -25.9312 21.3799 DADKARASPSVTCKS-p O15014;S1285-p DADKARASPSVTCKS 0.348298917275275 0.663746177847037 0.131666666666667 0.0606666666666667 8.51216208789463 2.43802664903777 0.131666666666667 0.0606666666666667 0.140858737391744 0.570423402875464 1.72391252730163 0.603684458651795 O15014 ZNF609 O15014.S1285.p_ZNF609 O15014_S1285s _1_1_1285_1285 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5790.5790.3 8.78 8.78 1.52 3 1 1 0 538.9535 1534.8776 S1285s TMT10 1282 (K) ARAsPSVTCK (S) ARAS(0.99)PS(0.0)VT(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF609 152443.5 2 27 63.1 699.07 HUMAN 1 8.5122 2.438 DADPNTPSPKPLEGR-p F5GWX5;S524-p DADPNTPSPKPLEGR 0.943595440034975 0.018662450602294 -0.0146666666666667 0.457333333333333 0.49653103821398 23.7914901577815 -0.0146666666666667 0.457333333333333 0.891963116314686 0.00417687024653815 -0.142337512188235 4.73852214959609 F5GWX5 CHD4 F5GWX5.S524.p_CHD4 F5GWX5_S524s_1_1_524_524 F5GWX5 A0A0C4DGG9|Q14839|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18334.18334.4 10.02 10.02 1.962 4 1 1 0 769.3937 2993.5885 N521n S524s TMT10 503 (K) WGQPPSPTPVPRPPDADPnTPsPK (P) WGQPPS(0.0)PT(0.0)PVPRPPDADPN(1.0)T(0.0)PS(0.99)PK K:TMT10,n:Deamidated,s:Phosphorylated S CHD4 218583 4 10 49.1 753.68 HUMAN 1 -0.4965 23.7915 DADRSILSPGGSCGP-p P78347;S210-p DADRSILSPGGSCGP 0.326502819643871 0.0378265919437746 -0.167333333333333 -0.265333333333333 9.09913917660742 19.0985306895296 -0.167333333333333 -0.265333333333333 0.123051264890564 0.0123068506728376 -1.82552584565767 -3.68484902897205 P78347 GTF2I P78347.S210.p_GTF2I P78347_S210s _1_1_210_210 P78347 P78347|P78347-3|P78347-4|P78347-2|P78347-5 General transcription factor II-I HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22564.22564.3 17.85 14.4 2.526 4 1 1 0 900.1308 2618.4046 S210s TMT10 199 (R) VMVTDADRSILsPGGSCGPIK (V) VMVT(0.0)DADRS(0.0)ILS(0.99)PGGS(0.0)CGPIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GTF2I 112927.8 10 3 140.1 523.54 HUMAN 1 -9.0991 -19.0985 DAEADVASLNRRIQL-p P09493-4;S87-p DAEADVASLNRRIQL 0.506389652891927 0.0339299464827186 0.141 0.286666666666667 5.45553315439541 19.8089254906855 0.141 0.286666666666667 0.284738822383847 0.0104497873056139 1.18692073487701 3.83451875268632 P09493 TPM1 P09493.4.S87.p_TPM1 P09493-4_S87s _1_1_87_87 P09493-4 Q5TCU8|P09493|P09493-3|P09493-4|P09493-9|P09493-10 Isoform 4 of Tropomyosin alpha-1 chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8763.8763.3 13.9 9.6 11.168 2 1 1 0 719.0472 2075.1609 S87s TMT10 77 (K) KATDAEADVAsLNRR (I) KAT(0.0)DAEADVAS(0.99)LNRR K:TMT10,s:Phosphorylated S TPM1 32847.3 2 4 2271.2 90.46 HUMAN 1 5.4555 19.8089 DAEDDAPTKRNSSPP-p P20020;T1211-p DAEDDAPTKRNSSPP 0.864453015861562 0.43910939708751 -0.0303333333333333 0.106 1.2327929320028 4.76239022758279 -0.0303333333333333 0.106 0.752871239263585 0.334011159627486 -0.331294162571549 1.06012364191427 P20020 ATP2B1 P20020.T1211.p_ATP2B1 P20020_T1211tS1215sS1216s_3_3_1211_1216 P20020 P20020|P20020-4|P20020-3|P20020-6|E7ERY9 Plasma membrane calcium-transporting ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23584.23584.5 13.21 9.25 1.148 6 3 3 0 925.8325 4385.2352 T1211t S1215s S1216s TMT10 1190 (R) IEDSEPHIPLIDDTDAEDDAPtKRNssPPPSPNK (N) IEDS(0.0)EPHIPLIDDT(0.0)DAEDDAPT(0.99)KRNS(0.99)S(0.99)PPPS(0.0)PNK K:TMT10,t:Phosphorylated T,s:Phosphorylated S ATP2B1 139722.6 6 14 921.1 200.23 HUMAN 1 -1.2328 4.7624 DAEEEIGTLSRCLNA-p Q08999;T364-p DAEEEIGTLSRCLNA 0.398291566945984 0.249812475990224 0.202 -0.255666666666667 7.37973919575021 7.93687410151043 0.202 -0.255666666666667 0.182821000124049 0.160809828899113 1.52733437455932 -1.62369763034065 Q08999 RBL2 Q08999.T364.p_RBL2 Q08999_T364t _1_1_364_364 Q08999 Q08999|Q08999-2 Retinoblastoma-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27421.27421.3 19.82 19.82 1.876 2 1 1 0 696.6753 2008.0436 T364t TMT10 352 (R) IFLGEDAEEEIGtLSR (C) IFLGEDAEEEIGT(0.99)LS(0.0)R t:Phosphorylated T RBL2 129790.7 1 1 408.1 323.79 HUMAN 1 7.3797 -7.9369 DAEEEIGTPRKFTRD-p P28749;T332-p DAEEEIGTPRKFTRD 0.392856208424678 0.00313960863177787 0.114 -0.743666666666667 7.48293887397983 37.5845079560255 0.114 -0.743666666666667 0.178527906633069 0.000174401093802448 1.54531198088205 -9.09621826635523 P28749 RBL1 P28749.T332.p_RBL1 P28749_T332t _1_1_332_332 P28749 P28749|P28749-2 Retinoblastoma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24645.24645.3 23.43 23.43 99 1 1 1 0 642.9836 1846.9748 T332t TMT10 320 (R) IFLGADAEEEIGtPR (K) IFLGADAEEEIGT(1.0)PR t:Phosphorylated T RBL1 122214.1 4 1 566.1 270.71 HUMAN 1 7.4829 -37.5845 DAEEGEVSDEDSADE-p Q4KWH8;S460-p DAEEGEVSDEDSADE 0.963145544211482 0.0579900107935597 0.00699999999999999 -0.435666666666667 0.312918941391695 16.4740777771143 0.00699999999999999 -0.435666666666667 0.930482277794523 0.0225212360366848 0.0913745660507547 -3.15744229071734 Q4KWH8 PLCH1 Q4KWH8.S460.p_PLCH1 Q4KWH8_S460sS464s_2_2_460_464 Q4KWH8 Q4KWH8|Q4KWH8-2|Q4KWH8-4|Q4KWH8-3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19318.19318.5 26.76 26.35 26.758 3 2 2 0 1012.8839 4900.4695 S460s S464s TMT10 443 (K) GKKLPYHLGDDAEEGEVsDEDsADEIEDECKFK (L) GKKLPY(0.0)HLGDDAEEGEVS(0.99)DEDS(0.99)ADEIEDECKFK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PLCH1 191330.6 8 19 201.1 451.38 HUMAN 1 0.3129 -16.4741 DAEKLSSTDNEDEEL-p Q4ZG55;T1097-p DAEKLSSTDNEDEEL 0.386906109244301 0.00542252106697309 0.126666666666667 0.585 7.63192152664524 32.8764824504791 0.126666666666667 0.585 0.172507446760681 0.000515646120855362 1.57123577034758 7.34420444325483 Q4ZG55 GREB1 Q4ZG55.T1097.p_GREB1 Q4ZG55_T1097t _1_1_1097_1097 Q4ZG55 Q4ZG55|Q4ZG55-4 Protein GREB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17839.17839.5 24.87 24.87 1.154 8 1 1 0 797.1749 3901.8765 T1097t TMT10 1084 (R) NEALESDAEKLSStDNEDEELGTEGSTSEK (R) NEALES(0.0)DAEKLS(0.0)S(0.0)T(0.99)DNEDEELGT(0.0)EGS(0.0)T(0.0)S(0.0)EK K:TMT10,t:Phosphorylated T GREB1 219316 10 4 1072.1 180.69 HUMAN 1 7.6319 32.8765 DAEPQPGSPAAESLE-p Q9H9J4;S754-p DAEPQPGSPAAESLE 0.753734734190257 0.854204161149206 0.047 -0.0243333333333333 2.34549051365799 0.964128229844118 0.047 -0.0243333333333333 0.58270795716215 0.800916382316851 0.584023315706483 -0.264830048463566 Q9H9J4 USP42 Q9H9J4.S754.p_USP42 Q9H9J4_S754s _1_1_754_754 Q9H9J4 Q9H9J4|Q9H9J4-2 Ubiquitin carboxyl-terminal hydrolase 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16930.16930.5 28.62 28.62 3.458 8 1 1 0 1021.4724 5023.3751 S754s TMT10 728 (K) GSTDEMSAPGAERGPPEDRDAEPQPGsPAAESLEEPDAAAGLSSTK (K) GS(0.0)T(0.0)DEMS(0.0)APGAERGPPEDRDAEPQPGS(0.99)PAAES(0.0)LEEPDAAAGLS(0.0)S(0.0)T(0.0)K K:TMT10,s:Phosphorylated S USP42 146872.9 6 3 255.1 399.37 HUMAN 1 2.3455 -0.9641 DAESEWHSENEEEEK-p Q99733-2;S125-p DAESEWHSENEEEEK 0.112544694105773 0.991961304482554 0.334666666666667 -0.00166666666666666 19.7977413267865 0.0515421552247612 0.334666666666667 -0.00166666666666666 0.0104767327897251 0.988202127342285 3.83567730949651 -0.0154810073377975 Q99733 NAP1L4 Q99733.2.S125.p_NAP1L4 Q99733-2_S125s _1_1_125_125 Q99733-2 Q99733-2 Isoform 2 of Nucleosome assembly protein 1-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24205.24205.4 27.34 27.34 2.309 4 1 1 0 1080.4993 4239.0167 S125s TMT10 108 (R) EFITGDVEPTDAESEWHsENEEEEKLAGDMK (S) EFIT(0.0)GDVEPT(0.0)DAES(0.0)EWHS(0.99)ENEEEEKLAGDMK K:TMT10,s:Phosphorylated S NAP1L4 44306.2 28 7 1403.1 146.36 HUMAN 1 19.7977 -0.0515 DAETKPKSPCT____-p O43684;S325-p DAETKPKSPCT____ 0.366839973732724 0.0414134903015843 0.132666666666667 0.277 8.08522824201682 18.5366360356617 0.132666666666667 0.277 0.155409361375369 0.0140067183686785 1.64994227981197 3.56866406887071 O43684 BUB3 O43684.S325.p_BUB3 O43684_S325s _1_1_325_325 O43684 O43684 Mitotic checkpoint protein BUB3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8844.8844.4 12.43 12.43 2.222 4 1 1 0 583.0576 2249.2414 S325s TMT10 315 (R) QVTDAETKPKsPCT (-) QVT(0.0)DAET(0.0)KPKS(0.99)PCT(0.0) K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BUB3 37610.5 2 3 3162.1 58.97 HUMAN 1 8.0852 18.5366 DAEVERLTCEEEEEK-p A0A0A0MT49;T1389-p DAEVERLTCEEEEEK 0.854392770664775 0.827950080485717 -0.0313333333333333 0.0383333333333334 1.3259590294774 1.14694366295339 -0.0313333333333334 0.0383333333333334 0.736892433320939 0.767901708244283 -0.353755183697803 0.31031092512095 A0A0A0MT49 NotFound A0A0A0MT49.T1389.p_NotFound A0A0A0MT49_T1389t _1_1_1389_1389 A0A0A0MT49 A0A0A0MT49|Q9HBD4|P51531-2|F6VDE0|A0A0U1RQZ9 Transcription activator BRG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29070.29070.4 12.88 12.88 2.604 2 1 1 0 1083.7704 4252.1132 T1389t TMT10 1368 (R) LMEEDELPSWIIKDDAEVERLtCEEEEEK (M) LMEEDELPS(0.0)WIIKDDAEVERLT(0.99)CEEEEEK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T SMARCA4 189484.7 1 8 392.1 331.85 HUMAN 1 -1.326 1.1469 DAEYIYPSLESDDDD-p Q9UPP1;S854-p DAEYIYPSLESDDDD 0.24308570935493 0.0282928627273433 -0.238 0.332666666666667 11.7502721268584 20.9772121784142 -0.238 0.332666666666667 0.0668302040768364 0.00798507100178742 -2.28811658210823 4.08781438739799 Q9UPP1 PHF8 Q9UPP1.S854.p_PHF8 Q9UPP1_S854sS857s_2_2_854_857 Q9UPP1 Q9UPP1|Q9UPP1-2|Q9UPP1-3|Q9UPP1-4|Q9UPP1-5 Histone lysine demethylase PHF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26276.26482.3 16.09 13.77 1.819 4 2 2 0 925.41 2614.2812 S854s S857s TMT10 847 (K) DAEYIYPsLEsDDDDPALK (S) DAEY(0.0)IY(0.0)PS(0.99)LES(0.99)DDDDPALK K:TMT10,s:Phosphorylated S PHF8 118946 2 34 376.1 336.84 HUMAN 1 -11.7503 20.9772 DAFKHAVSDPSILDS-p P05198;S158-p DAFKHAVSDPSILDS 0.208094276358716 0.183669890211405 0.213 0.145 13.1515172522113 9.67786737912469 0.213 0.145 0.0484003246557034 0.107699394609792 2.53840570877031 1.92504490143888 P05198 EIF2S1 P05198.S158.p_EIF2S1 P05198_S158s _1_1_158_158 P05198 P05198 Eukaryotic translation initiation factor 2 subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27854.27854.5 26.1 26.1 1.501 3 1 1 0 700.7518 3419.7604 S158s TMT10 155 (K) HAVsDPSILDSLDLNEDEREVLINNINR (R) HAVS(0.99)DPS(0.0)ILDS(0.0)LDLNEDEREVLINNINR s:Phosphorylated S EIF2S1 36396.8 4 2 2415.1 84.49 HUMAN 1 13.1515 9.6779 DAFRLHSSSLELGPR-p Q86X02;S179-p DAFRLHSSSLELGPR 0.508049976351614 0.798731294120568 0.117 -0.04 5.42655819105657 1.36446483757044 0.117 -0.04 0.28664487472335 0.730387809879807 1.18168460336333 -0.362919645935128 Q86X02 CDR2L Q86X02.S179.p_CDR2L Q86X02_S179s _1_1_179_179 Q86X02 Q86X02 Cerebellar degeneration-related protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15420.15420.4 13.76 13.76 1.105 3 1 1 0 625.8149 2420.2731 S179s TMT10 176 (R) LHSsSLELGPRPLEQENER (L) LHS(0.0)S(0.99)S(0.0)LELGPRPLEQENER s:Phosphorylated S CDR2L 53408.9 5 3 1833.1 112.07 HUMAN 1 5.4266 -1.3645 DAGEDSKSENGENAP-p Q9P0U4-2;S19-p DAGEDSKSENGENAP 0.659167343646731 0.0943558810768094 0.0693333333333333 0.339666666666667 3.39572149482631 13.5601257505054 0.0693333333333333 0.339666666666667 0.457538717517107 0.0440542107370563 0.799702945298886 2.6109984442089 Q9P0U4 CXXC1 Q9P0U4.2.S19.p_CXXC1 Q9P0U4-2_S19s _1_1_19_19 Q9P0U4-2 Q9P0U4-2|K7EQ21 Isoform 2 of CXXC-type zinc finger protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16205.16205.2 11.6 11.6 11.596 2 1 1 0 996.4283 1911.889 S19s TMT10 19 (K) sENGENAPIYCICR (K) S(0.99)ENGENAPIY(0.0)CICR C:Carbamidomethylation,s:Phosphorylated S CXXC1 78108.7 2 2 1791.1 114.51 HUMAN 1 3.3957 13.5601 DAGGGLSSDEEEGTS-p Q01831;S884-p DAGGGLSSDEEEGTS 0.214466572074941 0.0137900852034519 0.209 0.429333333333333 12.8870633288389 25.8344379369357 0.209 0.429333333333333 0.0514391362117161 0.00260949342128661 2.49073611799528 5.25142497851436 Q01831 XPC Q01831.S884.p_XPC Q01831_S883sS884s_2_2_883_884 Q01831 Q01831|Q01831-2 DNA repair protein complementing XP-C cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6678.6678.3 26.55 26.55 4.612 7 2 2 0 1016.7317 2888.2413 S883s S884s Hydrogen 869 (K) SEAAAPHTDAGGGLssDEEEGTSSQAEAAR (I) S(0.0)EAAAPHT(0.0)DAGGGLS(0.99)S(0.99)DEEEGT(0.0)S(0.0)S(0.0)QAEAAR s:Phosphorylated S XPC 106806.6 5 12 780.1 226.3 HUMAN 1 12.8871 25.8344 DAGLDALSSIISRQK-p Q9UNK0;S159-p DAGLDALSSIISRQK 0.707522429944391 0.581937782823729 -0.054 0.0623333333333333 2.82391861970761 3.17377229841184 -0.054 0.0623333333333333 0.5219250458388 0.481529357687969 -0.684415501051786 0.755382124960312 Q9UNK0 STX8 Q9UNK0.S159.p_STX8 Q9UNK0_S159s _1_1_159_159 Q9UNK0 Q9UNK0|K7EQB1 Syntaxin-8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31280.31280.3 22.49 22.49 1.249 3 1 1 0 746.7252 2158.1917 S159s TMT10 147 (K) IIQEQDAGLDALsSIISR (Q) IIQEQDAGLDALS(0.99)S(0.0)IIS(0.0)R s:Phosphorylated S STX8 27020.3 2 2 3806.1 42.69 HUMAN 1 -2.8239 3.1738 DAGLESDTAMKKGET-p Q9NR30;T15-p DAGLESDTAMKKGET 0.0939960834841436 0.0131693047225938 -0.336333333333333 -0.666333333333333 21.841842160456 26.1880726971157 -0.336333333333333 -0.666333333333333 0.00654358553882208 0.00240543003984619 -4.28585604914326 -5.34402341377237 Q9NR30 DDX21 Q9NR30.T15.p_DDX21 Q9NR30_T15t_1_1_15_15 Q9NR30 Q9NR30 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10882.10882.3 9.18 9.18 1.123 3 1 1 0 683.3434 1952.0523 T15t M17m TMT10 5 (K) LRSDAGLESDtAmK (K) LRS(0.0)DAGLES(0.0)DT(0.99)AM(1.0)K K:TMT10,t:Phosphorylated T,m:Oxidized methionine DDX21 87856.3 2 14 103.1 590.75 HUMAN 1 -21.8418 -26.1881 DAGPTQPSPAKPQLK-p Q9C086;S63-p DAGPTQPSPAKPQLK 0.112907121465904 0.00604775327324358 -0.749 -0.891333333333333 19.7743297173177 32.0427214339338 -0.749 -0.891333333333333 0.0105333624470106 0.000624781061452594 -3.83068560938358 -7.06630274336552 Q9C086 INO80B Q9C086.S63.p_INO80B Q9C086_S63s _1_1_63_63 Q9C086 J3KQ70|Q9C086|F8WCL7|B8ZZ93 INO80 complex subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7699.7699.5 19.02 19.02 1.128 2 1 1 0 593.3141 2882.5728 S63s TMT10 51 (K) HHQEEDAGPTQPsPAKPQLK (L) HHQEEDAGPT(0.0)QPS(0.99)PAKPQLK K:TMT10,s:Phosphorylated S INO80B 39035.8 2 1 1391.1 147.13 HUMAN 1 -19.7743 -32.0427 DAGSYRRSLGSAGPS-p Q8WUF5;S332-p DAGSYRRSLGSAGPS 0.908843022475064 0.137623353898847 -0.022 -0.162666666666667 0.815397462361916 11.3507116007726 -0.022 -0.162666666666667 0.828820059943555 0.0732704468112673 -0.226909487955411 -2.21663270285145 Q8WUF5 PPP1R13L Q8WUF5.S332.p_PPP1R13L Q8WUF5_S332s _1_1_332_332 Q8WUF5 Q8WUF5 RelA-associated inhibitor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13235.13235.3 10.33 10.33 2.307 4 1 1 0 503.5943 1428.8008 S332s TMT10 332 (R) sLGSAGPSGTLPR (S) S(0.99)LGS(0.0)AGPS(0.0)GT(0.0)LPR s:Phosphorylated S PPP1R13L 89431.8 1 14 371.1 339.39 HUMAN 1 -0.8154 -11.3507 DAHRGAESENEEESP-p Q9UEG4;S28-p DAHRGAESENEEESP 0.807313814085276 0.0341637378727217 -0.076 0.463 1.78862644489606 19.7572451078413 -0.076 0.463 0.662425977860667 0.0105748810071243 -0.461465797654652 3.82352263448009 Q9UEG4 ZNF629 Q9UEG4.S28.p_ZNF629 Q9UEG4_S28sS52s_2_2_28_52 Q9UEG4 Q9UEG4 Zinc finger protein 629 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18179.18179.4 16.77 12.26 2.214 9 2 2 0 1218.7607 4711.0944 S28s N30n S52s Hydrogen 25 (R) GAEsEnEEESPRQESSGEEIIMGDPAQsPESKDSTEMSLER (S) GAES(0.99)EN(1.0)EEES(0.0)PRQES(0.0)S(0.0)GEEIIMGDPAQS(0.99)PES(0.0)KDS(0.0)T(0.0)EMS(0.0)LER K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated ZNF629 98957.8 1 156 240.4 415.72 HUMAN 1 -1.7886 19.7572 DAIFDSLSPVNGFLS-p P42566;S140-p DAIFDSLSPVNGFLS 0.115120255396574 1 -0.388333333333333 1.85037170770859e-17 19.5452473927594 9.64327466553287e-16 -0.388333333333333 1.60246890531964e-17 0.0111038928099725 1 -3.7820280995422 1.97137515422376e-16 P42566 EPS15 P42566.S140.p_EPS15 P42566_S140s_1_1_140_140 P42566 P42566|B1AUU8 Epidermal growth factor receptor substrate 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32762.32762.3 18.75 18.75 1.308 4 1 1 0 1004.8673 2931.6071 S140s N143n TMT10 130 (K) AKYDAIFDSLsPVnGFLSGDK (V) AKY(0.0)DAIFDS(0.0)LS(0.99)PVN(1.0)GFLS(0.0)GDK K:TMT10,s:Phosphorylated S,n:Deamidated EPS15 99281.5 5 3 342.1 353.17 HUMAN 1 -19.5452 0 DAIKKKLTGIKHELQ-p P23528;T129-p DAIKKKLTGIKHELQ 0.251905903014708 0.0444539202864225 -0.404666666666667 0.336666666666667 11.4197560519479 18.099024694543 -0.404666666666667 0.336666666666667 0.0721147985731554 0.0154916447940625 -2.22981748186826 3.47946542614065 P23528 CFL1 P23528.T129.p_CFL1 P23528_T129t _1_1_129_129 P23528 E9PK25|P23528|G3V1A4 Cofilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19063.19063.5 17.59 17.59 14.269 2 1 1 0 632.1527 3076.7635 T129t TMT10 127 (K) KLtGIKHELQANCYEEVK (D) KLT(0.99)GIKHELQANCY(0.0)EEVK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T CFL1 18730.4 1 9 681.1 245.42 HUMAN 1 -11.4198 18.099 DAIQKQASEDSNDLT-p Q9ULH1-2;S1044-p DAIQKQASEDSNDLT 0.93306667659969 0.593496050482342 -0.0146666666666667 0.066 0.592460277195512 3.06635443169885 -0.0146666666666667 0.066 0.872476970369269 0.493587959250869 -0.168276087206876 0.733753405431307 Q9ULH1 ASAP1 Q9ULH1.2.S1044.p_ASAP1 Q9ULH1-2_S1044s _1_1_1044_1044 Q9ULH1-2 Q9ULH1-2|A0A0A0MRE5 Isoform 1 of Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25077.25077.4 20.67 20.67 1.103 5 1 1 0 868.4529 3390.8157 S1044s TMT10 1037 (R) DAIQKQAsEDSNDLTPTLPETPVPLPR (K) DAIQKQAS(0.99)EDS(0.0)NDLT(0.0)PT(0.0)LPET(0.0)PVPLPR K:TMT10,s:Phosphorylated S ASAP1 126865.1 12 10 801.1 222.95 HUMAN 1 -0.5925 3.0664 DAISKTYSYLTPDLW-p P15880;S249-p DAISKTYSYLTPDLW 0.147571881565505 0.556515550569778 -0.295 -0.0876666666666667 16.8666154445842 3.42958008338195 -0.295 -0.0876666666666667 0.0205749342264128 0.453985510103158 -3.23640952102162 -0.806269491281105 P15880 RPS2 P15880.S249.p_RPS2 P15880_S249s _1_1_249_249 P15880 P15880|E9PQD7 40S ribosomal protein S2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29924.29924.3 13.74 13.87 1.149 5 1 1 0 642.3353 1845.0199 S249s TMT10 247 (K) TYsYLTPDLWK (E) T(0.0)Y(0.0)S(0.99)Y(0.0)LT(0.0)PDLWK K:TMT10,s:Phosphorylated S RPS2 31609.1 1 3 1346.1 151.14 HUMAN 1 -16.8666 -3.4296 DAKEALNSCNKREIE-p P19338;S542-p DAKEALNSCNKREIE 0.502667836750771 0.0132282127607495 0.0923333333333333 -0.392 5.51044926515888 26.1450281738216 0.0923333333333334 -0.392 0.281160996238509 0.00242938968188153 1.19683285154266 -5.33268954647742 P19338 NCL P19338.S542.p_NCL P19338_S542s _1_1_542_542 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5225.5225.3 7.23 7.23 99 1 1 1 0 543.9446 1549.8521 S542s TMT10 538 (K) EALNsCNKR (E) EALNS(1.0)CNKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NCL 76670.1 1 18 114.1 570.88 HUMAN 1 5.5104 -26.145 DAKGDSESEEDEDLE-p P13861;S80-p DAKGDSESEEDEDLE 0.722162465540101 0.0759867715515824 -0.087 0.543 2.67473717606873 14.8556117654266 -0.087 0.543 0.540164803170159 0.0326917992550776 -0.653536375417334 2.84957710088795 P13861 PRKAR2A P13861.S80.p_PRKAR2A P13861_S80s _1_1_80_80 P13861 P13861|P13861-2 cAMP-dependent protein kinase type II-alpha regulatory subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17638.17638.4 19.24 19.24 2.244 3 1 1 0 753.6095 2931.4471 S80s TMT10 71 (R) VADAKGDSEsEEDEDLEVPVPSR (F) VADAKGDS(0.0)ES(0.99)EEDEDLEVPVPS(0.0)R K:TMT10,s:Phosphorylated S PRKAR2A 45859.9 4 2 1121.1 175.11 HUMAN 1 -2.6747 14.8556 DAKKLVRSPSGLRMV-p Q9BQ24-2;S17-p DAKKLVRSPSGLRMV 0.729488445744597 0.0705726734420588 0.0626666666666666 -0.39 2.60092922894512 15.3084149636464 0.0626666666666667 -0.39 0.549423305092261 0.0294549644991638 0.638121813197984 -2.93453390137561 Q9BQ24 ZFYVE21 Q9BQ24.2.S17.p_ZFYVE21 Q9BQ24-2_S17s _1_1_17_17 Q9BQ24-2 Q9BQ24-2|G3V2M2|G3V5D6 Isoform 2 of Zinc finger FYVE domain-containing protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9628.9628.3 9.55 9.55 1.409 2 1 1 0 431.9129 1213.7578 S17s TMT10 14 (K) LVRsPSGLR (M) LVRS(0.99)PS(0.0)GLR s:Phosphorylated S ZFYVE21 29218 3 1 4139.1 36.82 HUMAN 1 2.6009 -15.3084 DAKLLGNSLLKLEGD-p O14578-4;S1624-p DAKLLGNSLLKLEGD 0.328749983161747 0.0135890273803704 -0.473666666666667 0.54 9.0331071842249 25.9423831078035 -0.473666666666667 0.54 0.124936484529637 0.00254543311161709 -1.81409414703628 5.27956611768696 O14578 CIT O14578.4.S1624.p_CIT O14578-4_S1624s _1_1_1624_1624 O14578-4 O14578-4|O14578-3 Isoform 4 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26054.26054.2 11.92 4.33 99 1 1 1 0 698.4234 1315.8713 S1624s TMT10 1620 (K) LLGNsLLK (L) LLGNS(1.0)LLK K:TMT10,s:Phosphorylated S CIT 238656.7 2 15 366.1 342.11 HUMAN 1 -9.0331 25.9424 DAKLSGPSLKMPSLE-p Q09666;S4903-p DAKLSGPSLKMPSLE 0.97158608608734 0.700867007230737 0.00833333333333333 -0.0843333333333333 0.243762198141999 2.12198859194377 0.00833333333333334 -0.0843333333333333 0.945417811745128 0.613481033879233 0.0716978376704882 -0.535587353945482 Q09666 AHNAK Q09666.S4903.p_AHNAK Q09666_S4903s_1_1_4903_4903 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22625.22625.3 9.73 9.73 1.178 4 1 1 0 846.816 2442.4609 S4903s M4906m TMT10 4899 (K) LSGPsLKmPSLEISAPK (V) LS(0.0)GPS(0.99)LKM(1.0)PS(0.0)LEIS(0.0)APK K:TMT10,s:Phosphorylated S,m:Oxidized methionine AHNAK 629603.7 3 107 1.1 4313.36 HUMAN 1 0.2438 -2.122 DAKVKTPSFGISAPQ-p Q09666;S5186-p DAKVKTPSFGISAPQ 0.671374778439016 0.0855360649812156 -0.057 -0.189 3.24044267514409 14.1327679025151 -0.057 -0.189 0.474193648371577 0.0386120811041344 -0.768839779846762 -2.71567976833165 Q09666 AHNAK Q09666.S5186.p_AHNAK Q09666_S5186s _1_1_5186_5186 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30123.30123.4 17.43 17.43 1.113 4 1 1 0 795.2036 3097.8228 S5186s TMT10 5182 (K) VKTPsFGISAPQVSIPDVNVNLK (G) VKT(0.0)PS(0.99)FGIS(0.0)APQVS(0.0)IPDVNVNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 6 120 1.1 4313.36 HUMAN 1 -3.2404 -14.1328 DALAEGGSEAYSRFL-p Q6ZRV2;S40-p DALAEGGSEAYSRFL 0.996943812735477 0.00194371730000273 -0.000666666666666672 0.785 0.0233245533674465 42.461098905884 -0.000666666666666683 0.785509531074387 0.9946437194125 5.67401016384605e-05 -0.00702881520933945 11.2956946234328 Q6ZRV2 FAM83H Q6ZRV2.S40.p_FAM83H Q6ZRV2_S40s _1_1_40_40 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20676.20676.3 15.49 15.49 3.435 3 1 1 0 639.9774 1837.9493 S40s TMT10 30 (R) LAVDALAEGGsEAYSR (F) LAVDALAEGGS(0.99)EAY(0.0)S(0.0)R s:Phosphorylated S FAM83H 127633.5 1 1 7.1 1347.23 HUMAN 1 -0.0233 42.4611 DALDKIRYESLTDPS-p P07900-2;Y183-p DALDKIRYESLTDPS 0.0948633510902073 0.334243378573165 -0.519666666666667 -0.113666666666667 21.7553284114395 6.30717811959237 -0.519666666666667 -0.113666666666667 0.0066752442117371 0.234035741998981 -4.26620229918783 -1.3387718052349 P07900 HSP90AA1 P07900.2.Y183.p_HSP90AA1 P07900-2_Y183y _1_1_183_183 P07900-2 P07900-2|P08238|Q58FF7|Q58FF8 Isoform 2 of Heat shock protein HSP 90-alpha GG20160819_MSz_CCLE_T4D7_pY_Injection_01.18669.18669.4 11.82 11.82 2.243 5 1 1 0 644.8549 2496.4277 Y183y TMT10 181 (K) IRyESLTDPSKLDSGK (E) IRY(0.99)ES(0.0)LT(0.0)DPS(0.0)KLDS(0.0)GK K:TMT10,y:Phosphorylated Y HSP90AA1 98729.9 6 1 3.1 124.79 HUMAN 1 -21.7553 -6.3072 DALGRRDSELGPGVK-p O95466-2;S624-p DALGRRDSELGPGVK 0.260516354231127 0.0686669619927159 -0.343666666666667 0.363333333333333 11.0677878548586 15.4716984204885 -0.343666666666667 0.363333333333333 0.0782026040039677 0.0283680940406047 -2.16798946818894 2.96538553616042 O95466 FMNL1 O95466.2.S624.p_FMNL1 O95466-2_S624s _1_1_624_624 O95466-2 O95466-3|O95466-2|K7EK60|A0A0A0MR62 Isoform 2 of Formin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8990.8990.3 11.08 9.03 99 1 1 1 0 532.6241 1515.8895 S624s TMT10 622 (R) RDsELGPGVK (A) RDS(1.0)ELGPGVK K:TMT10,s:Phosphorylated S FMNL1 123091.5 1 2 2364.1 86.46 HUMAN 1 -11.0678 15.4717 DALKDDDSGDHDQNE-p B8ZZ50;S13-p DALKDDDSGDHDQNE 0.228095422318106 0.194912201484788 -0.295 0.134666666666667 12.3348393392521 9.33711988453301 -0.295 0.134666666666667 0.058413881603494 0.116489830018854 -2.39187046036059 1.86603823357059 B8ZZ50 EIF4E2 B8ZZ50.S13.p_EIF4E2 B8ZZ50_S13s _1_1_13_13 B8ZZ50 O60573|B8ZZ50|O60573-2|B9A044|B8ZZL3|B9A023|B4E1E4 Eukaryotic translation initiation factor 4E type 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16587.16587.4 15.74 15.74 5.832 3 1 1 0 951.9384 3724.76 S13s Acetyl 1 (-) MNNKFDALKDDDsGDHDQNEENSTQK (D) MNNKFDALKDDDS(0.99)GDHDQNEENS(0.0)T(0.0)QK K:TMT10,s:Phosphorylated S EIF4E2 27333 7 1 2999.1 63.57 HUMAN 1 -12.3348 9.3371 DALNIENSDSESWTS-p Q96DT6;S144-p DALNIENSDSESWTS 0.172398238493754 0.0658364736848679 0.227666666666667 0.250666666666667 15.2012384068154 15.7215237008246 0.227666666666667 0.250666666666667 0.0301909069274176 0.0267822851666563 2.91627951239767 3.01281759910799 Q96DT6 ATG4C Q96DT6.S144.p_ATG4C Q96DT6_S144s _1_1_144_144 Q96DT6 Q96DT6 Cysteine protease ATG4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26882.26882.4 14.96 14.96 1.324 7 1 1 0 918.2087 3589.853 S144s TMT10 132 (R) AWTWPDALNIENsDSESWTSHTVKK (F) AWT(0.0)WPDALNIENS(0.99)DS(0.0)ES(0.0)WT(0.0)S(0.0)HT(0.0)VKK K:TMT10,s:Phosphorylated S ATG4C 53067 1 1 4730.1 27.34 HUMAN 1 15.2012 15.7215 DALPPGPTPEDSPSL-p Q9BQQ3;T237-p DALPPGPTPEDSPSL 0.416481641896136 0.229454883765922 0.128833333333333 0.1595 7.02156360405133 8.42213419807021 0.128833333333333 0.1595 0.198537998607912 0.143809170149186 1.46478728168742 1.70775071745246 Q9BQQ3 GORASP1 Q9BQQ3.T237.p_GORASP1 Q9BQQ3_T237tS241s_2_2_237_241 Q9BQQ3 Q9BQQ3|B4E1H8|B3KPY8|Q9BQQ3-3 Golgi reassembly-stacking protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26294.26294.5 24.36 24.36 1.25 7 2 2 0 863.4378 4153.2221 T237t S241s TMT10 212 (K) KPPGTPPPSALPLGAPPPDALPPGPtPEDsPSLETGSR (Q) KPPGT(0.0)PPPS(0.0)ALPLGAPPPDALPPGPT(0.99)PEDS(0.99)PS(0.0)LET(0.0)GS(0.0)R K:TMT10,t:Phosphorylated T,s:Phosphorylated S GORASP1 46709.8 7 4 2976.1 64.26 HUMAN 2 7.0216 8.4221 DALQLENSQEIETSN-p Q659A1;S519-p DALQLENSQEIETSN 0.813083216141779 0.127344718004259 -0.0756666666666667 0.191666666666667 1.72581300543277 11.7985348215423 -0.0756666666666667 0.191666666666667 0.672076483663163 0.0660916383632741 -0.447187224152365 2.29552764398181 Q659A1 ICE2 Q659A1.S519.p_ICE2 Q659A1_S519s_1_1_519_519 Q659A1 Q659A1 Little elongation complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26215.26215.5 21.92 22.94 5.23 7 1 1 0 1116.7559 5498.78 N518n S519s TMT10 510 (K) TSDALQLEnsQEIETSNKNDMTIDILHADGERPNVLENLDNSK (E) T(0.0)S(0.0)DALQLEN(0.99)S(0.99)QEIET(0.0)S(0.0)N(0.0)KN(0.0)DMT(0.0)IDILHADGERPN(0.0)VLEN(0.0)LDN(0.0)S(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S ICE2 111036.5 1 6 1160.1 171.12 HUMAN 1 -1.7258 11.7985 DALSPIHTPQRSVPE-p Q6ZVM7;T164-p DALSPIHTPQRSVPE 0.326502819643871 0.036393605373413 0.211 -0.295333333333333 9.10131101819821 19.3638993744435 0.211 -0.295333333333333 0.122989744181958 0.0115773739845341 1.82590186027633 -3.74038778585273 Q6ZVM7 TOM1L2 Q6ZVM7.T164.p_TOM1L2 Q6ZVM7_T164t _1_1_164_164 Q6ZVM7 Q6ZVM7|Q6ZVM7-5|Q6ZVM7-2 TOM1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26935.26935.4 19.91 19.91 3.279 2 1 1 0 715.8789 2780.5169 T164t TMT10 147 (R) KGVEFPMADLDALSPIHtPQR (S) KGVEFPMADLDALS(0.0)PIHT(0.99)PQR K:TMT10,t:Phosphorylated T TOM1L2 55897.7 1 4 2215.1 93.2 HUMAN 1 9.1013 -19.3639 DANRKRGSLLSEPAI-p Q9NQT8;S732-p DANRKRGSLLSEPAI 0.795512375926724 0.725422343780879 -0.037 0.05 1.91983211568977 1.91884070017356 -0.037 0.05 0.642712562041997 0.64285929840836 -0.490974174086686 0.49069662899357 Q9NQT8 KIF13B Q9NQT8.S732.p_KIF13B Q9NQT8_S732s _1_1_732_732 Q9NQT8 Q9NQT8 Kinesin-like protein KIF13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15546.15546.3 8.8 8.8 2.603 2 1 1 0 578.9868 1654.9802 S732s TMT10 730 (K) RGsLLSEPAIQVR (R) RGS(0.99)LLS(0.0)EPAIQVR s:Phosphorylated S KIF13B 204097.3 2 4 335.1 355.82 HUMAN 1 -1.9198 1.9188 DAPAQPPTPGPAASP-p A0A0G2JPP5;T1342-p DAPAQPPTPGPAASP 0.58471981560589 0.297539317212108 0.083 0.105333333333333 4.28576145454507 6.94950446549453 0.083 0.105333333333333 0.372755323504747 0.201859667451487 0.971374043145107 1.45177311647937 A0A0G2JPP5 SCRIB A0A0G2JPP5.T1342.p_SCRIB A0A0G2JPP5_T1342t _1_1_1342_1342 A0A0G2JPP5 A0A0G2JPP5|Q14160|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18944.18944.4 15.69 17.44 1.129 5 1 1 0 983.9846 3852.9507 T1342t TMT10 1323 (R) AFAAVPTSHPPEDAPAQPPtPGPAASPEQLSFRER (Q) AFAAVPT(0.0)S(0.0)HPPEDAPAQPPT(0.99)PGPAAS(0.0)PEQLS(0.0)FRER t:Phosphorylated T SCRIB 178690.9 6 30 22.1 1004.81 HUMAN 1 4.2858 6.9495 DAPNGDLTPEMILSM-p P49711;T717-p DAPNGDLTPEMILSM 0.783165300068864 0.142674232775302 -0.0503333333333333 0.218 2.04133164222026 11.1434056811497 -0.0503333333333334 0.218 0.624981030489375 0.0768527534570606 -0.517935896384854 2.18025428242747 P49711 CTCF P49711.T717.p_CTCF P49711_T717t _1_1_717_717 P49711 P49711|P49711-2 Transcriptional repressor CTCF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30698.30698.5 22.48 22.48 1.269 3 1 1 0 925.4194 4543.1203 T717t TMT10 690 (K) KEPDAEPAEGEEEEAQPAATDAPNGDLtPEMILSMMDR (-) KEPDAEPAEGEEEEAQPAAT(0.0)DAPNGDLT(0.99)PEMILS(0.0)MMDR K:TMT10,t:Phosphorylated T CTCF 84324.5 3 7 1956.1 105.21 HUMAN 1 -2.0413 11.1434 DAPRLLPSPVTCTPK-p Q9BU19-5;S236-p DAPRLLPSPVTCTPK 0.621729850184917 0.224179290080543 0.068 0.161 3.83774459384724 8.55266678998914 0.068 0.161 0.413262064195696 0.139551118274783 0.885984469065573 1.73033685073364 Q9BU19 ZNF692 Q9BU19.5.S236.p_ZNF692 Q9BU19-5_S236s _1_1_236_236 Q9BU19-5 Q9BU19-5|Q9BU19-2 Isoform 5 of Zinc finger protein 692 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22189.22189.3 10.47 10.47 1.112 3 1 1 0 584.325 1670.9915 S236s TMT10 233 (R) LLPsPVTCTPK (E) LLPS(0.99)PVT(0.0)CT(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF692 58742.9 3 1 4882.1 25.5 HUMAN 1 3.8377 8.5527 DAPSLRSSPGPAPRV-p Q9H330-2;S16-p DAPSLRSSPGPAPRV 0.850659473056698 0.0310889125388133 -0.031 -0.314666666666667 1.35912455221942 20.3687911991521 -0.031 -0.314666666666667 0.731286480844374 0.00918588237706308 -0.361683915629582 -3.95475970270429 Q9H330 TMEM245 Q9H330.2.S16.p_TMEM245 Q9H330-2_S16s _1_1_16_16 Q9H330-2 Q9H330|Q9H330-2|Q9H330-4 Isoform 2 of Transmembrane protein 245 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7145.7145.3 14.52 10.2 1.408 3 1 1 0 572.9602 1636.8968 S16s TMT10 9 (K) DAPSLRSsPGPAPR (V) DAPS(0.0)LRS(0.0)S(0.99)PGPAPR s:Phosphorylated S TMEM245 97868.8 2 2 2319.1 87.95 HUMAN 1 -1.3591 -20.3688 DAPSPAPSLGERLEP-p Q12873-3;S1664-p DAPSPAPSLGERLEP 0.214459963931144 0.062520037723929 0.183666666666667 0.334333333333333 12.8891365221506 16.0262622672398 0.183666666666667 0.334333333333333 0.0514145865507199 0.024967426110068 2.49110897932695 3.07106012302998 Q12873 CHD3 Q12873.3.S1664.p_CHD3 Q12873-3_S1660sS1664s_2_2_1660_1664 Q12873-3 Q12873-3|Q12873-2 Isoform 3 of Chromodomain-helicase-DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15359.15359.3 13.23 13.23 5.19 3 2 2 0 716.3043 1986.964 S1660s S1664s TMT10 1652 (K) METEADAPsPAPsLGER (L) MET(0.0)EADAPS(0.99)PAPS(0.99)LGER s:Phosphorylated S CHD3 234573.2 9 61 49.3 753.68 HUMAN 1 12.8891 16.0263 DAPTKRNSSPPPSPN-p P20020;S1215-p DAPTKRNSSPPPSPN 0.864453015861562 0.43910939708751 -0.0303333333333333 0.106 1.2327929320028 4.76239022758279 -0.0303333333333333 0.106 0.752871239263585 0.334011159627486 -0.331294162571549 1.06012364191427 P20020 ATP2B1 P20020.S1215.p_ATP2B1 P20020_T1211tS1215sS1216s_3_3_1211_1216 P20020 P20020|P20020-4|P20020-3|P20020-6|E7ERY9 Plasma membrane calcium-transporting ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23584.23584.5 13.21 9.25 1.148 6 3 3 0 925.8325 4385.2352 T1211t S1215s S1216s TMT10 1190 (R) IEDSEPHIPLIDDTDAEDDAPtKRNssPPPSPNK (N) IEDS(0.0)EPHIPLIDDT(0.0)DAEDDAPT(0.99)KRNS(0.99)S(0.99)PPPS(0.0)PNK K:TMT10,t:Phosphorylated T,s:Phosphorylated S ATP2B1 139722.6 6 14 921.1 200.23 HUMAN 1 -1.2328 4.7624 DAQCREGSPGSQQHP-p Q13796;S974-p DAQCREGSPGSQQHP 0.968077169102971 0.0212472429360145 0.00633333333333333 0.465333333333333 0.274867394529263 22.879880957796 0.00633333333333333 0.465333333333333 0.938670697171997 0.00515242767439995 0.0805821749981922 4.52105927830927 Q13796 SHROOM2 Q13796.S974.p_SHROOM2 Q13796_S974s _1_1_974_974 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3975.3975.3 15.32 12.37 6.196 3 1 1 0 591.6108 1692.8503 S974s Hydrogen 972 (R) EGsPGSQQHPPSQK (A) EGS(0.99)PGS(0.0)QQHPPS(0.0)QK K:TMT10-Lys-Only,s:Phosphorylated S SHROOM2 177605.1 4 18 90.1 622.62 HUMAN 1 0.2749 22.8799 DAQKGGETPGSEQWK-p O60271;T226-p DAQKGGETPGSEQWK 0.204713889706557 0.089855968732987 -0.277333333333333 -0.333666666666667 13.3307814747675 13.8489019109215 -0.277333333333333 -0.333666666666667 0.0464431697299514 0.0412201728802313 -2.57084633816415 -2.66364133841871 O60271 SPAG9 O60271.T226.p_SPAG9 O60271_T226t _1_1_226_226 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-9|O60271-3|O60271-5 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31606.31606.5 22.95 20.18 1.314 4 1 1 0 886.6731 4349.3748 T226t TMT10 199 (K) ERPISLGIFPLPAGDGLLTPDAQKGGEtPGSEQWK (F) ERPIS(0.0)LGIFPLPAGDGLLT(0.0)PDAQKGGET(0.99)PGS(0.0)EQWK K:TMT10,t:Phosphorylated T SPAG9 147001.6 3 16 84.1 629.25 HUMAN 1 -13.3308 -13.8489 DAQSLNLSQEDFDRY-p Q9UJ41;S594-p DAQSLNLSQEDFDRY 0.554914010887333 0.772249621887867 -0.0803333333333333 -0.029 4.72300616954292 1.55271851543893 -0.0803333333333333 -0.029 0.337053920477796 0.699404059068019 -1.05304400754016 -0.407256907935574 Q9UJ41 RABGEF1 Q9UJ41.S594.p_RABGEF1 Q9UJ41_S594s _1_1_594_594 Q9UJ41 Q9UJ41|Q9UJ41-3|Q9UJ41-4|E9PFK9|Q9UJ41-2|Q3HKR1|A0A0A0MSJ3 Rab5 GDP/GTP exchange factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25179.25179.4 12.54 12.54 1.331 6 1 1 0 767.6056 2987.4366 S594s TMT10 586 (K) LDAQSLNLsQEDFDRYMSGQTSPR (K) LDAQS(0.0)LNLS(0.99)QEDFDRY(0.0)MS(0.0)GQT(0.0)S(0.0)PR s:Phosphorylated S RABGEF1 80625 18 4 1593.1 129.22 HUMAN 1 -4.723 -1.5527 DAQSRRESLDILAPG-p O94827-2;S270-p DAQSRRESLDILAPG 0.455538062417866 0.963448536010751 -0.11 0.012 6.29895545456333 0.230760311952045 -0.11 0.012 0.234479270643683 0.948252439829134 -1.33765016412059 0.0679611267400789 O94827 PLEKHG5 O94827.2.S270.p_PLEKHG5 O94827-2_S270s _1_1_270_270 O94827-2 O94827-6|O94827-2|O94827-7|O94827-3|O94827-5|O94827-4|Q5SY18 Isoform 2 of Pleckstrin homology domain-containing family G member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12027.12027.3 8.02 8.02 99 1 1 1 0 564.6429 1611.9492 S270s TMT10 268 (R) REsLDILAPGRR (R) RES(1.0)LDILAPGRR s:Phosphorylated S PLEKHG5 121312.9 1 2 2914.1 66.07 HUMAN 1 -6.299 0.2308 DARAQSPSSGDEPEP-p Q9HCM7;S33-p DARAQSPSSGDEPEP 0.697222520756474 0.0549443464334015 0.107666666666667 0.524 2.94168297409881 16.7901204643436 0.107666666666667 0.524 0.507962559217566 0.0209405437029044 0.70854235852153 3.21899566593283 Q9HCM7 FBRSL1 Q9HCM7.S33.p_FBRSL1 Q9HCM7_S31sS33sS34s_3_3_31_34 Q9HCM7 Q9HCM7 Fibrosin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11199.11199.3 7.1 7.1 3.725 4 3 3 0 756.6469 2028.0286 S31s S33s S34s TMT10 29 (R) AQsPssGDEPEPSPGK (E) AQS(0.99)PS(0.99)S(0.99)GDEPEPS(0.0)PGK K:TMT10,s:Phosphorylated S FBRSL1 111247 1 14 716.1 237.81 HUMAN 1 2.9417 16.7901 DARFGHGSDYSRQQN-p Q9NWH9;S759-p DARFGHGSDYSRQQN 0.209461411369469 0.218135212225269 0.213333333333333 0.196666666666667 13.1037995641617 8.70166501112165 0.213333333333333 0.196666666666667 0.0489350508093493 0.134844581230769 2.52978798244044 1.75611165170196 Q9NWH9 SLTM Q9NWH9.S759.p_SLTM Q9NWH9_S759s _1_1_759_759 Q9NWH9 Q9NWH9|Q9NWH9-3 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5765.5765.2 10.77 7.86 2.026 3 1 1 0 667.7894 1254.6065 S759s TMT10 755 (R) FGHGsDYSR (Q) FGHGS(0.99)DY(0.0)S(0.0)R s:Phosphorylated S SLTM 117431.6 2 14 167.1 494.15 HUMAN 1 13.1038 8.7017 DARKTLDSVAKERAR-p P02545;S94-p DARKTLDSVAKERAR 0.660412515639265 0.0138811738705875 0.0693333333333333 0.412666666666667 3.37441879324472 25.7819327143647 0.0693333333333333 0.412666666666667 0.45978851689985 0.00264123308381683 0.795486957705232 5.23777606965825 P02545 LMNA P02545.S94.p_LMNA P02545_S94s _1_1_94_94 P02545 P02545|P02545-3|P02545-6|P02545-2|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12942.12942.2 8.64 8.64 8.641 2 1 1 0 636.355 1191.7349 S94s TMT10 91 (K) TLDsVAK (E) T(0.0)LDS(0.99)VAK K:TMT10,s:Phosphorylated S LMNA 74423.5 2 9 60.1 706.83 HUMAN 1 3.3744 25.7819 DARQLWDSPETAPAA-p Q9Y613;S486-p DARQLWDSPETAPAA 0.717979850279593 0.00427354342479974 -0.0643333333333333 -0.559 2.715439583548 34.8306844510735 -0.0643333333333334 -0.559 0.535125986726817 0.000328799807717855 -0.661997536438919 -8.0320898968116 Q9Y613 FHOD1 Q9Y613.S486.p_FHOD1 Q9Y613_S486s _1_1_486_486 Q9Y613 Q9Y613 FH1/FH2 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16226.16226.2 15.71 11.42 3.019 2 1 1 0 875.9224 1670.87 S486s TMT10 482 (R) QLWDsPETAPAAR (T) QLWDS(0.99)PET(0.0)APAAR s:Phosphorylated S FHOD1 127404.8 3 4 730.1 236 HUMAN 1 -2.7154 -34.8307 DARRKAPSPVATAGQ-p A7XYQ1;S313-p DARRKAPSPVATAGQ 0.40723792230155 0.239465629874275 0.110666666666667 0.134 7.20484607497813 8.17767250751474 0.110666666666667 0.134 0.190333569544399 0.15213626474929 1.49682494580511 1.6654284551535 A7XYQ1 SOBP A7XYQ1.S313.p_SOBP A7XYQ1_S313s _1_1_313_313 A7XYQ1 A7XYQ1 Sine oculis-binding protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13593.13593.5 16.1 16.1 1.148 12 1 1 0 823.0189 4031.0959 S313s TMT10 310 (R) KAPsPVATAGQSQGPGPSASTTVSPSDTANCSVTK (I) KAPS(0.99)PVAT(0.0)AGQS(0.0)QGPGPS(0.0)AS(0.0)T(0.0)T(0.0)VS(0.0)PS(0.0)DT(0.0)ANCS(0.0)VT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SOBP 93911.3 1 1 5808.1 16.1 HUMAN 1 7.2048 8.1777 DARVTPGSGALQGQS-p A0A087X1U6;S2444-p DARVTPGSGALQGQS 0.306383440584975 0.149823131531813 0.185333333333333 0.192666666666667 9.62130097147966 10.8484618453274 0.185333333333333 0.192666666666667 0.109111343381644 0.0822533917835814 1.9159858520067 2.12863729689666 A0A087X1U6 EPPK1 A0A087X1U6.S2444.p_EPPK1 A0A087X1U6_S2444s _1_1_2444_2444 A0A087X1U6 P58107|A0A087X1U6|A0A075B730 Epiplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.34578.34578.3 20.17 20.17 1.639 5 1 1 0 901.7962 2623.4082 S2444s TMT10 2440 (R) VTPGsGALQGQSVSVWELLFYR (E) VT(0.0)PGS(0.99)GALQGQS(0.0)VS(0.0)VWELLFY(0.0)R s:Phosphorylated S EPPK1 558101.4 1 8 680.1 245.5 HUMAN 1 9.6213 10.8485 DASASPLSPHRRAKS-p Q6WCQ1-2;S365-p DASASPLSPHRRAKS 0.558323344531567 0.0289420661002558 0.0826666666666667 -0.295666666666667 4.67207657958962 20.8313535743586 0.0826666666666667 -0.295666666666667 0.34102980918687 0.0082578053678203 1.04360650404648 -4.05568510632584 Q6WCQ1 MPRIP Q6WCQ1.2.S365.p_MPRIP Q6WCQ1-2_S365s _1_1_365_365 Q6WCQ1-2 Q6WCQ1-2 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20024.20024.4 15.14 15.14 1.145 4 1 1 0 674.8297 2616.3255 S365s TMT10 346 (R) DFTNEAPPAPLPDASASPLsPHR (R) DFT(0.0)NEAPPAPLPDAS(0.0)AS(0.0)PLS(0.99)PHR s:Phosphorylated S MPRIP 118899.7 11 8 204.1 449.03 HUMAN 1 4.6721 -20.8314 DASDEQNSQSSMEHS-p Q4VC05-2;S154-p DASDEQNSQSSMEHS 0.589750668393929 0.00564160849781482 -0.22 1.33666666666667 4.22516158140356 32.5900474484946 -0.22 1.33666666666667 0.377993073621492 0.00055080167863305 -0.959932113397795 7.24771802697527 Q4VC05 BCL7A Q4VC05.2.S154.p_BCL7A Q4VC05-2_S154s _1_1_154_154 Q4VC05-2 Q4VC05-2 Isoform 2 of B-cell CLL/lymphoma 7 protein family member A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7297.7297.4 26.6 26.6 1.12 7 1 1 0 872.3686 3406.48 S154s TMT10 141 (K) EHPGAEDASDEQNsQSSMEHSMNSSEK (V) EHPGAEDAS(0.0)DEQNS(0.99)QS(0.0)S(0.0)MEHS(0.0)MNS(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S BCL7A 25086 1 1 3948.1 40.36 HUMAN 1 -4.2252 32.59 DASGRAASPESASST-p Q96BT3;S397-p DASGRAASPESASST 0.655992252124176 0.613522074067785 0.0633333333333333 0.121 3.43600019672874 2.88371894072687 0.0633333333333333 0.121 0.453314885611942 0.514787633998696 0.807659113682269 0.696598082529744 Q96BT3 CENPT Q96BT3.S397.p_CENPT Q96BT3_S397s _1_1_397_397 Q96BT3 Q96BT3 Centromere protein T HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9884.9884.2 14.86 10.9 1.525 6 1 1 0 999.4725 1917.9715 S397s TMT10 395 (R) AAsPESASSTPESLQAR (R) AAS(0.99)PES(0.0)AS(0.0)S(0.0)T(0.0)PES(0.0)LQAR s:Phosphorylated S CENPT 60706.9 2 5 2525.1 79.95 HUMAN 1 3.436 2.8837 DASKASPSVSTAGQP-p Q8IVW6;S167-p DASKASPSVSTAGQP 0.306684187031916 0.842165178693442 0.162 0.0303333333333334 9.60619152763537 1.04857803094841 0.162 0.0303333333333334 0.109491611365119 0.785492778928687 1.9133660620615 0.285991359170668 Q8IVW6 ARID3B Q8IVW6.S167.p_ARID3B Q8IVW6_S167s _1_1_167_167 Q8IVW6 Q8IVW6|Q8IVW6-4|Q8IVW6-3 AT-rich interactive domain-containing protein 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20901.20901.3 16.23 12.11 1.121 5 1 1 0 1104.2415 3230.726 S167s TMT10 160 (K) DASKASPsVSTAGQPNWNLDEQLK (Q) DAS(0.0)KAS(0.0)PS(0.99)VS(0.0)T(0.0)AGQPNWNLDEQLK K:TMT10,s:Phosphorylated S ARID3B 60750.1 3 2 3894.1 41.23 HUMAN 1 9.6062 1.0486 DASKRLLSDSLPPST-p Q9Y490;S1225-p DASKRLLSDSLPPST 0.574710100296435 0.19890537726741 -0.078 -0.150333333333333 4.42565513528885 9.22883039639417 -0.078 -0.150333333333333 0.360939561575154 0.119430970211585 -0.997668562518813 -1.84729888648947 Q9Y490 TLN1 Q9Y490.S1225.p_TLN1 Q9Y490_S1225s _1_1_1225_1225 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19502.19502.3 14.74 11.96 1.176 6 1 1 0 833.7547 2419.2779 S1225s TMT10 1222 (K) RLLsDSLPPSTGTFQEAQSR (L) RLLS(0.99)DS(0.0)LPPS(0.0)T(0.0)GT(0.0)FQEAQS(0.0)R s:Phosphorylated S TLN1 271930.4 1 17 267.1 395.2 HUMAN 1 -4.4257 -9.2288 DASPRNISPGLQNGE-p Q9Y2I7;S1549-p DASPRNISPGLQNGE 0.112125389732965 0.817320530043157 -0.393666666666667 -0.0243333333333333 19.8532025660487 1.22597073231338 -0.393666666666667 -0.0243333333333333 0.0103437911550426 0.754054831144654 -3.84751664859906 -0.329604728578171 Q9Y2I7 PIKFYVE Q9Y2I7.S1549.p_PIKFYVE Q9Y2I7_S1549s _1_1_1549_1549 Q9Y2I7 Q9Y2I7 1-phosphatidylinositol 3-phosphate 5-kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12733.12733.3 8.88 8.88 99 1 1 1 0 565.6343 1614.9215 S1549s TMT10 1547 (R) NIsPGLQNGEK (E) NIS(1.0)PGLQNGEK K:TMT10,s:Phosphorylated S PIKFYVE 239756.4 2 10 1398.1 146.55 HUMAN 1 -19.8532 -1.226 DASQRRRSLEPAENV-p P12931-2;S17-p DASQRRRSLEPAENV 0.196770076101337 0.29442443153944 0.197666666666667 0.107333333333333 13.7569878943099 7.01145928549848 0.197666666666667 0.107333333333333 0.0421018530007106 0.199000455942416 2.64840848391774 1.46261420147165 P12931 SRC P12931.2.S17.p_SRC P12931-2_S17s _1_1_17_17 P12931-2 P12931-2 Isoform 2 of Proto-oncogene tyrosine-protein kinase Src HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9809.9809.4 26.65 23.98 16.585 5 1 1 0 853.159 3329.646 S17s Hydrogen 17 (R) sLEPAENVHGAGGGAFPASQTPSKPASADGHR (G) S(0.99)LEPAENVHGAGGGAFPAS(0.0)QT(0.0)PS(0.0)KPAS(0.0)ADGHR K:TMT10-Lys-Only,s:Phosphorylated S SRC 61101 10 8 1289.2 157.77 HUMAN 1 13.757 7.0115 DASSLTRSLNLTFAT-p Q96BT3;S188-p DASSLTRSLNLTFAT 0.977130047691108 0.711741434816181 0.00600000000000001 -0.0493333333333333 0.197220505364352 2.03144146185298 0.00600000000000001 -0.0493333333333333 0.955603979090383 0.626405920491598 0.0582975016517255 -0.515693550991816 Q96BT3 CENPT Q96BT3.S188.p_CENPT Q96BT3_S188s _1_1_188_188 Q96BT3 Q96BT3|H3BTR4|Q96BT3-2 Centromere protein T HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25520.25520.4 14.49 14.49 2.326 4 1 1 0 676.6204 2623.4881 S188s TMT10 188 (R) sLNLTFATPLQPQSVQRPGLAR (R) S(0.99)LNLT(0.0)FAT(0.0)PLQPQS(0.0)VQRPGLAR s:Phosphorylated S CENPT 60706.9 2 3 2525.1 79.95 HUMAN 1 0.1972 -2.0314 DASVNGWSSDEEKAG-p Q13488;S690-p DASVNGWSSDEEKAG 0.34689437832203 0.00844672548835042 -0.154 0.498 8.54285834125746 29.433682861859 -0.154 0.498 0.139866647688744 0.00113928325389087 -1.72922751803935 6.25198942348873 Q13488 TCIRG1 Q13488.S690.p_TCIRG1 Q13488_S690s_1_1_690_690 Q13488 Q13488|Q13488-2 V-type proton ATPase 116 kDa subunit a isoform 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29789.29789.3 18.68 16.56 1.13 3 1 1 0 881.4257 2561.3135 N687n S690s TMT10 676 (K) AGLLDLPDASVnGWsSDEEK (A) AGLLDLPDAS(0.0)VN(1.0)GWS(0.99)S(0.0)DEEK K:TMT10,n:Deamidated,s:Phosphorylated S TCIRG1 93708 3 2 5509.1 18.68 HUMAN 1 -8.5429 29.4337 DATDGPGTEDAALRM-p Q6WCQ1-2;T607-p DATDGPGTEDAALRM 0.989464151490073 0.00248584650157384 -0.00466666666666668 -0.88 0.0941625027025357 39.8823640248971 -0.00466666666666671 -0.88 0.978551641349685 0.000102745686324861 -0.0281498822152127 -10.0785749151919 Q6WCQ1 MPRIP Q6WCQ1.2.T607.p_MPRIP Q6WCQ1-2_T607t _1_1_607_607 Q6WCQ1-2 Q6WCQ1-2|Q6WCQ1-3 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29153.29153.5 16.68 16.68 1.426 4 1 1 0 806.994 3950.9702 T607t TMT10 596 (R) FGMLDATDGPGtEDAALRMEVDRSPGLPMSDLK (T) FGMLDAT(0.0)DGPGT(0.99)EDAALRMEVDRS(0.0)PGLPMS(0.0)DLK K:TMT10,t:Phosphorylated T MPRIP 118899.7 1 12 204.1 449.03 HUMAN 1 -0.0942 -39.8824 DATFSPGSEQAEKSP-p Q86WB0;S338-p DATFSPGSEQAEKSP 0.248798577375663 0.00248687826166773 -0.181 -0.715 11.5292903682724 39.8421344979426 -0.181 -0.715 0.0703187210403899 0.000103701861009241 -2.24911106686965 -10.0605803533394 Q86WB0 ZC3HC1 Q86WB0.S338.p_ZC3HC1 Q86WB0_S335sS338sS344s_3_3_335_344 Q86WB0 Q86WB0|Q86WB0-2|C9J0I9 Nuclear-interacting partner of ALK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17740.17740.4 7.94 7.94 1.743 6 3 3 0 769.0981 2833.4732 S335s S338s S344s TMT10 329 (R) SQDATFsPGsEQAEKsPGPIVSR (T) S(0.0)QDAT(0.0)FS(0.99)PGS(0.99)EQAEKS(0.99)PGPIVS(0.0)R K:TMT10,s:Phosphorylated S ZC3HC1 56401.6 2 19 624.1 258.98 HUMAN 1 -11.5293 -39.8421 DATMLIHSSEEEEDE-p Q16825;S710-p DATMLIHSSEEEEDE 0.152381872383781 0.0318082035389879 0.292666666666667 0.400666666666667 16.4414057467016 20.2183023200324 0.292666666666667 0.400666666666667 0.0226913024925796 0.00950976462707933 3.15341030020369 3.92223636712493 Q16825 PTPN21 Q16825.S710.p_PTPN21 Q16825_S710sS711s_2_2_710_711 Q16825 Q16825 Tyrosine-protein phosphatase non-receptor type 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23332.23332.3 20.71 20.71 8.219 6 2 2 0 1144.4597 3271.427 S710s S711s TMT10 700 (K) SLSDATMLIHssEEEEDEDFEEESGAR (A) S(0.0)LS(0.0)DAT(0.0)MLIHS(0.99)S(0.99)EEEEDEDFEEES(0.0)GAR s:Phosphorylated S PTPN21 134191.5 1 16 762.1 229.75 HUMAN 1 16.4414 20.2183 DATVWIPSPSRQPVY-p Q5VTI5;S446-p DATVWIPSPSRQPVY 0.225518171425009 0.555540463318804 0.270333333333333 -0.0596666666666667 12.4265366252015 3.43941228617849 0.270333333333333 -0.0596666666666667 0.057193455637523 0.452958872917808 2.40822690943568 -0.808208855006748 Q5VTI5 NotFound Q5VTI5.S446.p_NotFound Q5VTI5_S446s _1_1_446_446 Q5VTI5 A0A1B0GUN5|Q5VTI5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27463.27463.3 14.32 14.32 1.878 8 1 1 0 1154.2285 3380.696 S446s TMT10 438 (R) QDATVWIPsPSRQPVYYDELDAASSSLR (R) QDAT(0.0)VWIPS(0.99)PS(0.0)RQPVY(0.0)Y(0.0)DELDAAS(0.0)S(0.0)S(0.0)LR s:Phosphorylated S PLEKHA6 119745.7 2 14 52.1 743.36 HUMAN 1 12.4265 -3.4394 DAVATDSSPEELEAG-p Q9BQK8-2;S162-p DAVATDSSPEELEAG 0.94478758147709 0.337687928607312 -0.0118333333333333 0.0983333333333333 0.484256200163769 6.24564799384733 -0.0118333333333333 0.0983333333333333 0.894487714363608 0.23737512181556 -0.138985634610105 1.32787999374028 Q9BQK8 LPIN3 Q9BQK8.2.S162.p_LPIN3 Q9BQK8-2_S161sS162s_2_2_161_162 Q9BQK8-2 Q9BQK8-2 Isoform 2 of Phosphatidate phosphatase LPIN3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24672.24672.3 20.38 18.96 3.272 5 2 2 0 1269.6096 3646.879 S161s S162s TMT10 152 (K) QKEDAVATDssPEELEAGAESELSLPEK (L) QKEDAVAT(0.0)DS(0.99)S(0.99)PEELEAGAES(0.0)ELS(0.0)LPEK K:TMT10,s:Phosphorylated S LPIN3 94213.1 1 8 1554.1 131.9 HUMAN 2 -0.4843 6.2456 DAVPDVRSPATPACR-p Q69YH5;S309-p DAVPDVRSPATPACR 0.328843621955026 0.209311501763014 0.219666666666667 0.155333333333333 9.03034207564952 8.93542095165273 0.219666666666667 0.155333333333333 0.125016055640682 0.127778535076851 1.81361546168317 1.79654262359453 Q69YH5 CDCA2 Q69YH5.S309.p_CDCA2 Q69YH5_S309s _1_1_309_309 Q69YH5 Q69YH5|E9PEI0 Cell division cycle-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21006.21006.4 17.28 17.28 1.397 9 1 1 0 890.4141 3478.6594 S309s TMT10 285 (K) GSSDAVSPDTFTAEVSSDAVPDVRsPATPACR (R) GS(0.0)S(0.0)DAVS(0.0)PDT(0.0)FT(0.0)AEVS(0.0)S(0.0)DAVPDVRS(0.99)PAT(0.0)PACR C:Carbamidomethylation,s:Phosphorylated S CDCA2 114214.8 1 6 407.1 324.13 HUMAN 1 9.0303 8.9354 DAVPPDHSPRARSVA-p Q9BST9;S529-p DAVPPDHSPRARSVA 0.45060350179761 0.0689529368718725 0.115 -0.213 6.39219587737566 15.4444715226263 0.115 -0.213 0.229498796415012 0.0285464986475254 1.35414202120875 -2.96023301683137 Q9BST9 RTKN Q9BST9.S529.p_RTKN Q9BST9_S529s _1_1_529_529 Q9BST9 Q9BST9|Q9BST9-2|Q9BST9-3 Rhotekin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16153.16780.3 19.04 19.04 8.113 3 1 1 0 616.6348 1767.9227 S529s TMT10 518 (R) TFSLDAVPPDHsPR (A) T(0.0)FS(0.0)LDAVPPDHS(0.99)PR s:Phosphorylated S RTKN 63465.1 6 8 1486.1 137.99 HUMAN 1 6.3922 -15.4445 DAVVGRPSMDKKAQ_-p Q6DD88;S535-p DAVVGRPSMDKKAQ_ 0.0393880886227965 0.00719792492613561 0.583 0.655 31.6424872714236 30.6630209973998 0.583 0.655 0.000685095749181463 0.00085841619058116 6.94784285546051 6.62560438152445 Q6DD88 ATL3 Q6DD88.S535.p_ATL3 Q6DD88_S535s _1_1_535_535 Q6DD88 Q6DD88|F5H6I7 Atlastin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9992.9992.3 11.53 11.53 99 1 1 1 0 571.6324 1632.9143 S535s TMT10 528 (R) DAVVGRPsMDK (K) DAVVGRPS(1.0)MDK K:TMT10,s:Phosphorylated S ATL3 60997.3 5 7 1880.1 109.36 HUMAN 1 31.6425 30.663 DAVVTSRSEDDETKE-p Q86TB9-4;S475-p DAVVTSRSEDDETKE 0.133129641422699 0.470338489723559 -0.382 0.0863333333333334 18.0442687469314 4.36622938766753 -0.382 0.0863333333333333 0.0156882002903171 0.365912344537526 -3.47122996258287 0.986340237580909 Q86TB9 PATL1 Q86TB9.4.S475.p_PATL1 Q86TB9-4_S475s _1_1_475_475 Q86TB9-4 Q86TB9-4|Q86TB9-2 Isoform 4 of Protein PAT1 homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15827.15827.3 14.44 7.64 1.104 4 1 1 0 778.7159 2254.1637 S475s TMT10 466 (K) MIDAVVTSRsEDDETK (E) MIDAVVT(0.0)S(0.0)RS(0.99)EDDET(0.0)K K:TMT10,s:Phosphorylated S PATL1 80249 1 8 1540.1 133.07 HUMAN 1 -18.0443 4.3662 DAWNALGSLPKEAAR-p O75521;S101-p DAWNALGSLPKEAAR 0.384780498587345 0.940140962611929 -0.140333333333333 0.00833333333333336 7.67778918926408 0.382340763368448 -0.140333333333333 0.00833333333333336 0.170695110495992 0.915726798032886 -1.57921060989702 0.110844993471756 O75521 ECI2 O75521.S101.p_ECI2 O75521_S101s _1_1_101_101 O75521 O75521|A0A0C4DGA2|O75521-2|F1LLU7|F8W6J1|F8WAW4 Enoyl-CoA delta isomerase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26923.26923.3 15.75 14.52 99 1 1 1 0 775.4308 2244.3108 S101s TMT10 91 (K) AKWDAWNALGsLPK (E) AKWDAWNALGS(1.0)LPK K:TMT10,s:Phosphorylated S ECI2 43983.7 3 2 2084.1 98.15 HUMAN 1 -7.6778 0.3823 DAYKTEDSDDIHFEP-p P49792;S2008-p DAYKTEDSDDIHFEP 0.140818172070489 0.53574734423765 -0.418333333333333 -0.0666666666666666 17.4041772387175 3.64713317990721 -0.418333333333333 -0.0666666666666666 0.018179514303483 0.431804020801971 -3.34266985353734 -0.848913047396108 P49792 RANBP2 P49792.S2008.p_RANBP2 P49792_S2008s _1_1_2008_2008 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26822.26822.5 17.4 17.4 1.18 4 1 1 0 1010.4881 4968.4642 S2008s TMT10 1999 (K) DDDAYKTEDsDDIHFEPVVQMPEKVELVTGEEDEK (V) DDDAY(0.0)KT(0.0)EDS(0.99)DDIHFEPVVQMPEKVELVT(0.0)GEEDEK K:TMT10,s:Phosphorylated S RANBP2 362585.9 2 41 9.1 1298.62 HUMAN 1 -17.4042 -3.6471 DAYRREHSAFGDRPE-p J3KNL6;S1305-p DAYRREHSAFGDRPE 0.805205983516672 0.0900901483671732 -0.092 0.201 1.81339526090818 13.8336477708928 -0.092 0.201 0.658658762579139 0.0413652089947573 -0.467068710595122 2.66085321480628 J3KNL6 SEC16A J3KNL6.S1305.p_SEC16A J3KNL6_S1305s _1_1_1305_1305 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5892.5892.3 14.85 7 99 1 1 1 0 604.3022 1730.9226 S1305s TMT10 1303 (R) EHsAFGDRPEK (R) EHS(1.0)AFGDRPEK K:TMT10,s:Phosphorylated S SEC16A 253486.5 7 26 15.1 1143.82 HUMAN 1 -1.8134 13.8336 DAYRSPHSPFYQLPP-p Q8TEK3;S458-p DAYRSPHSPFYQLPP 0.276322361958096 0.273471718256757 0.247333333333333 -0.139666666666667 10.5625658668506 7.417438370373 0.247333333333333 -0.139666666666667 0.0878503332570794 0.181240880321231 2.07963977369605 -1.53345440404308 Q8TEK3 DOT1L Q8TEK3.S458.p_DOT1L Q8TEK3_S458s _1_1_458_458 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15752.16007.3 15.38 15.38 2.502 4 1 1 0 683.6773 1969.0493 S458s TMT10 455 (R) SPHsPFYQLPPSVQR (H) S(0.0)PHS(0.99)PFY(0.0)QLPPS(0.0)VQR s:Phosphorylated S DOT1L 185648.6 4 6 132.1 534.85 HUMAN 1 10.5626 -7.4174 DAYSSFGSRSDSRGK-p A0A0D9SF53;S74-p DAYSSFGSRSDSRGK 0.0722929672835505 0.00379001554573942 0.422333333333333 -0.583666666666667 24.5165599787411 35.8937455165379 0.422333333333333 -0.583836510358128 0.00353463034945788 0.000257410020002777 4.92236913536524 -8.42912378765265 A0A0D9SF53 NotFound A0A0D9SF53.S74.p_NotFound A0A0D9SF53_S74s _1_1_74_74 A0A0D9SF53 A0A0D9SF53 ATP-dependent RNA helicase DDX3X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9127.9127.3 11.65 11.65 1.662 4 1 1 0 590.9529 1690.8801 S74s TMT10 65 (K) DKDAYSSFGsR (S) DKDAY(0.0)S(0.0)S(0.0)FGS(0.99)R K:TMT10,s:Phosphorylated S DDX3X 82160.2 1 5 1042.1 184.93 HUMAN 1 24.5166 -35.8937 DCDARQISLQQQLIH-p P54132;S367-p DCDARQISLQQQLIH 0.482635422548001 0.391363032835136 -0.135666666666667 0.138666666666667 5.82426334423798 5.41681936288301 -0.135666666666667 0.138666666666667 0.261561407426147 0.287288382212284 -1.25319357129068 1.17966807380681 P54132 BLM P54132.S367.p_BLM P54132_S367s _1_1_367_367 P54132 P54132|H0YNU5 Bloom syndrome protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30356.30356.4 14.98 14.98 99 1 1 1 0 661.6027 2563.4253 S367s TMT10 365 (R) QIsLQQQLIHVMEHICK (L) QIS(1.0)LQQQLIHVMEHICK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BLM 160709.2 1 11 1140.2 173.27 HUMAN 1 -5.8243 5.4168 DCDGKSESSPEREAV-p Q8NEZ4-3;S1250-p DCDGKSESSPEREAV 0.0622808715508477 0.803734070142981 -0.467666666666667 0.106333333333333 26.2217560372511 1.32766560730951 -0.467666666666667 0.106333333333333 0.00238684598445118 0.73660292532726 -5.36001520440597 0.35412740824758 Q8NEZ4 KMT2C Q8NEZ4.3.S1250.p_KMT2C Q8NEZ4-3_S1248sS1250sS1251s_3_3_1248_1251 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17254.17254.4 7.76 7.76 7.761 4 3 3 0 935.9002 3500.6612 S1248s S1250s S1251s TMT10 1238 (R) EGELMDCDGKsEssPEREAVDDETK (G) EGELMDCDGKS(0.99)ES(0.99)S(0.99)PEREAVDDET(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2C 554869.1 1 29 88.1 626.31 HUMAN 1 -26.2218 1.3277 DCDHQQNSPTLERPG-p Q9HAN9;S117-p DCDHQQNSPTLERPG 0.148752032948153 0.102958581097413 -0.266666666666667 0.536666666666667 16.6956376843291 13.0413962445549 -0.266666666666667 0.536666666666667 0.0214011066645097 0.0496432694075754 -3.20292604809618 2.51714266653632 Q9HAN9 NMNAT1 Q9HAN9.S117.p_NMNAT1 Q9HAN9_S117s _1_1_117_117 Q9HAN9 Q9HAN9|B1AN62 Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7631.7631.4 13.18 13.18 2 3 1 1 0 655.5527 2539.2157 S117s TMT10 106 (K) LEASDCDHQQNsPTLERPGR (K) LEAS(0.0)DCDHQQNS(0.99)PT(0.0)LERPGR C:Carbamidomethylation,s:Phosphorylated S NMNAT1 32160.1 3 1 4961.1 24.63 HUMAN 1 -16.6956 13.0414 DCESSTVSEEDYFSS-p Q9H4H8;S369-p DCESSTVSEEDYFSS 0.594811993936193 0.0136323169587602 0.081 -0.512333333333333 4.16197531360326 25.9247122697843 0.081 -0.512333333333333 0.383532762547886 0.00255581122390506 0.947967439695827 -5.2749519307939 Q9H4H8 FAM83D Q9H4H8.S369.p_FAM83D Q9H4H8_S369s _1_1_369_369 Q9H4H8 A0A087WXK8|Q9H4H8|Q9H4H8-2 Protein FAM83D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9965.9965.5 23.26 23.26 1.767 8 1 1 0 733.5356 3583.676 S369s TMT10 359 (R) KPHDCESSTVsEEDYFSSHRDELQSR (K) KPHDCES(0.0)S(0.0)T(0.0)VS(0.99)EEDY(0.0)FS(0.0)S(0.0)HRDELQS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S FAM83D 64879.8 1 4 1311.1 155.21 HUMAN 1 4.162 -25.9247 DCFISKPSEKNIFTL-p O95377;S181-p DCFISKPSEKNIFTL 0.670375570853073 0.537368442469625 -0.0626666666666667 0.0703333333333333 3.25219713597614 3.62885729893957 -0.0626666666666667 0.0703333333333333 0.472911947900693 0.43362495732182 -0.771186993394344 0.845351746558227 O95377 GJB5 O95377.S181.p_GJB5 O95377_S181sS210s_2_2_181_210 O95377 O95377 Gap junction beta-5 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33810.33810.5 8.04 2.96 1.244 5 2 2 0 895.0841 4311.5083 S181s S210s TMT10 180 (K) PsEKNIFTLFMVATAAICILLNLVELIYLVsK (R) PS(0.99)EKNIFT(0.0)LFMVAT(0.0)AAICILLNLVELIY(0.0)LVS(0.99)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GJB5 31829.4 1 1 7042.1 8.04 HUMAN 1 -3.2522 3.6289 DCFKTIISYIDEQFE-p Q15019-2;S155-p DCFKTIISYIDEQFE 0.902053104705045 0.189261458943136 0.0433333333333333 0.305 0.879787595664069 9.50780563084844 0.0433333333333333 0.305 0.816622309668898 0.112000364719566 0.243446498625602 1.89558663369043 Q15019 SEPT2 Q15019.2.S155.p_SEPT2 Q15019-2_S155s _1_1_155_155 Q15019-2 Q15019-2|Q15019-3|B5MCX3 Isoform 2 of Septin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36614.36614.3 7.77 7.77 7.773 3 1 1 0 608.2992 1742.9162 S155s TMT10 152 (K) TIIsYIDEQFER (Y) T(0.0)IIS(0.99)Y(0.0)IDEQFER s:Phosphorylated S SEPT2 45745.4 1 1 2580.1 77.8 HUMAN 1 0.8798 9.5078 DCGLCFASPGSLSRH-p Q8N1G0;S1146-p DCGLCFASPGSLSRH 0.539805799310612 0.0369221560367934 0.101666666666667 -0.277 4.94619925473186 19.2611271367828 0.101666666666667 -0.277 0.320169586071462 0.0118546104217346 1.0941895393791 -3.71882695055353 Q8N1G0 ZNF687 Q8N1G0.S1146.p_ZNF687 Q8N1G0_S1146s _1_1_1146_1146 Q8N1G0 Q8N1G0 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23851.23851.3 26.49 26.49 3.099 3 1 1 0 946.0821 2756.264 S1146s TMT10 1130 (R) VEDGAQQCLDCGLCFAsPGSLSR (H) VEDGAQQCLDCGLCFAS(0.99)PGS(0.0)LS(0.0)R C:Carbamidomethylation,s:Phosphorylated S ZNF687 131979.7 2 19 156.1 501.88 HUMAN 1 4.9462 -19.2611 DCHTKGSSFLGKELS-p Q96HI0;S332-p DCHTKGSSFLGKELS 0.362002918323239 0.00277749746682462 -0.151333333333333 -0.758666666666667 8.19834444212315 38.7112904558058 -0.151333333333333 -0.758666666666667 0.151413833749057 0.00013454605066311 -1.66955163018901 -9.56655867686481 Q96HI0 SENP5 Q96HI0.S332.p_SENP5 Q96HI0_S332s _1_1_332_332 Q96HI0 Q96HI0|Q96HI0-2 Sentrin-specific protease 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16487.16487.2 11.25 3.23 1.323 2 1 1 0 617.3377 1153.6981 S332s TMT10 330 (K) GSsFLGK (E) GS(0.0)S(0.99)FLGK K:TMT10,s:Phosphorylated S SENP5 88003.7 1 4 1582.1 129.81 HUMAN 1 -8.1983 -38.7113 DCIHEHLSGDEFEKS-p A0AVK6;S102-p DCIHEHLSGDEFEKS 0.684508678954235 0.00248584650157384 0.0813333333333333 -0.966 3.08790462175482 39.8684658853818 0.0813333333333333 -0.966 0.491144785879698 0.000103075016136302 0.738210857621407 -10.0723549959608 A0AVK6 E2F8 A0AVK6.S102.p_E2F8 A0AVK6_S102s _1_1_102_102 A0AVK6 A0AVK6 Transcription factor E2F8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12646.12646.4 16.06 13.98 99 1 1 1 0 564.2624 2174.0588 S102s TMT10 95 (K) DCIHEHLsGDEFEK (S) DCIHEHLS(1.0)GDEFEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S E2F8 94792 3 4 1788.1 114.89 HUMAN 1 3.0879 -39.8685 DCSEAAGSPARKVKM-p Q6P6C2;S384-p DCSEAAGSPARKVKM 0.0848925536936968 0.00761523729895844 0.82 -0.635 22.9313644927263 30.2454461733414 0.82 -0.635 0.00509170871533141 0.000945051297411214 4.53822069282935 -6.49674125659701 Q6P6C2 ALKBH5 Q6P6C2.S384.p_ALKBH5 Q6P6C2_S384s _1_1_384_384 Q6P6C2 Q6P6C2|Q6P6C2-3|K7ER58 RNA demethylase ALKBH5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6107.6107.3 20.32 20.32 2.535 6 1 1 0 704.6189 2031.8763 S384s TMT10 371 (K) SYESSEDCSEAAGsPAR (K) S(0.0)Y(0.0)ES(0.0)S(0.0)EDCS(0.0)EAAGS(0.99)PAR C:Carbamidomethylation,s:Phosphorylated S ALKBH5 44597.5 7 6 578.1 267.46 HUMAN 1 22.9314 -30.2454 DCTPHPNSISIDAGP-p Q9Y2H0;S742-p DCTPHPNSISIDAGP 0.614858955839297 0.258969354682978 0.0906666666666667 -0.121 3.92039949580528 7.7298264180494 0.0906666666666667 -0.121 0.405471235525182 0.168662043610353 0.901883018365043 -1.5877692936607 Q9Y2H0 DLGAP4 Q9Y2H0.S742.p_DLGAP4 Q9Y2H0_S742s _1_1_742_742 Q9Y2H0 Q9Y2H0|Q9Y2H0-1|Q9Y2H0-3 Disks large-associated protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16109.16109.3 10.57 10.57 1.204 4 1 1 0 781.7088 2263.1338 S742s TMT10 732 (R) SLPDCTPHPNsISIDAGPR (Q) S(0.0)LPDCT(0.0)PHPNS(0.99)IS(0.0)IDAGPR C:Carbamidomethylation,s:Phosphorylated S DLGAP4 108980 2 6 298.1 378.69 HUMAN 1 3.9204 -7.7298 DCVFKNHTEDESLEG-p Q8IY42;T212-p DCVFKNHTEDESLEG 0.523598348587299 0.169214323928998 -0.0843333333333333 -0.14 5.19809131641511 10.1459183106726 -0.0843333333333334 -0.14 0.302127925260489 0.0966959242615319 -1.14023857640926 -2.00624856032363 Q8IY42 C4orf19 Q8IY42.T212.p_C4orf19 Q8IY42_T212tS216s_2_2_212_216 Q8IY42 Q8IY42 Uncharacterized protein C4orf19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23067.23067.4 10.01 10.01 10.008 4 2 2 0 1057.5063 4067.0333 T212t S216s TMT10 205 (K) DCVFKNHtEDEsLEGIQPPVGEHGLNTPFSVR (R) DCVFKNHT(0.99)EDES(0.99)LEGIQPPVGEHGLNT(0.0)PFS(0.0)VR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S C4orf19 34254.4 1 11 703.1 239.48 HUMAN 1 -5.1981 -10.1459 DCVQQRGSPHESVED-p Q86UW6;S843-p DCVQQRGSPHESVED 0.151004382003491 0.581775966742634 0.323666666666667 -0.077 16.5501101340413 3.17522137663865 0.323666666666667 -0.077 0.0221303858778418 0.481368716155708 3.17454284312005 -0.755672808650097 Q86UW6 N4BP2 Q86UW6.S843.p_N4BP2 Q86UW6_S843s _1_1_843_843 Q86UW6 Q86UW6|Q86UW6-2 NEDD4-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11502.11502.5 14.99 14.99 2.437 5 1 1 0 707.9515 3455.7702 S843s TMT10 827 (K) LVNSVSVNTDCVQQRGsPHESVEDGRK (S) LVNS(0.0)VS(0.0)VNT(0.0)DCVQQRGS(0.99)PHES(0.0)VEDGRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S N4BP2 200566.4 1 6 1216.1 165.62 HUMAN 1 16.5501 -3.1752 DDAADADTAIINAEG-p Q9BY67-3;T451-p DDAADADTAIINAEG 0.403419030554318 0.0322945834325783 0.213333333333333 0.575 7.27836573875608 20.1192743383095 0.213333333333333 0.575 0.18713862153044 0.00972909773475527 1.50965705999154 3.90091673898514 Q9BY67 CADM1 Q9BY67.3.T451.p_CADM1 Q9BY67-3_T451t_1_1_451_451 Q9BY67-3 Q9BY67-3|Q9BY67-4 Isoform 3 of Cell adhesion molecule 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15814.15814.3 19.68 21.86 4.73 2 1 1 0 1005.7968 2934.3965 T451t N455n TMT10 442 (K) GADDAADADtAIInAEGGQNNSEEK (K) GADDAADADT(0.99)AIIN(0.99)AEGGQN(0.0)N(0.0)S(0.0)EEK K:TMT10,t:Phosphorylated T,n:Deamidated CADM1 51988.7 1 1 3878.1 41.43 HUMAN 1 7.2784 20.1193 DDAQFDASHCDSDKG-p Q16576;S95-p DDAQFDASHCDSDKG 0.756874847050467 0.386686372182271 -0.0883333333333334 -0.1 2.31669561178988 5.48506208657084 -0.0883333333333334 -0.1 0.586584305355982 0.282809368044081 -0.577847918323839 -1.19199130927358 Q16576 RBBP7 Q16576.S95.p_RBBP7 Q16576_S95s _1_1_95_95 Q16576 Q16576|Q16576-2 Histone-binding protein RBBP7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19881.19881.4 24.91 24.91 3.848 4 1 1 0 1016.2316 3981.9281 S95s TMT10 83 (R) VHIPNDDAQFDAsHCDSDKGEFGGFGSVTGK (I) VHIPNDDAQFDAS(0.99)HCDS(0.0)DKGEFGGFGS(0.0)VT(0.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RBBP7 48161.5 8 5 1734.1 118.69 HUMAN 1 -2.3167 -5.4851 DDCPAIGTPLRDSSS-p Q15648;T805-p DDCPAIGTPLRDSSS 0.53382854587899 0.0813898909656127 -0.114666666666667 0.262 5.0478546703829 14.4465455788631 -0.114666666666667 0.262 0.312762397052937 0.0359207538262234 -1.11282054983529 2.77355185893943 Q15648 MED1 Q15648.T805.p_MED1 Q15648_T805t _1_1_805_805 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37669.37669.5 17.41 17.41 4.285 11 1 1 0 934.4647 4588.3228 T805t TMT10 769 (R) LSSSDSIGPDVTDILSDIAEEASKLPSTSDDCPAIGtPLR (D) LS(0.0)S(0.0)S(0.0)DS(0.0)IGPDVT(0.0)DILS(0.0)DIAEEAS(0.0)KLPS(0.0)T(0.0)S(0.0)DDCPAIGT(0.99)PLR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T MED1 169445 1 8 115.1 566.87 HUMAN 1 -5.0479 14.4465 DDDDDDATPPPVIAP-p Q13153-2;T185-p DDDDDDATPPPVIAP 0.585329136085302 0.118077884020604 0.085 0.164666666666667 4.27875948460458 12.2345502224449 0.085 0.164666666666667 0.373356787909937 0.0597784951146801 0.970053617633412 2.37279639934118 Q13153 PAK1 Q13153.2.T185.p_PAK1 Q13153-2_S174sT185t_2_2_174_185 Q13153-2 Q13153-2|B3KNX7|E9PM17 Isoform 2 of Serine/threonine-protein kinase PAK 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19751.19751.4 19.48 17.63 4.083 5 2 2 0 1107.5129 4267.093 S174s T185t TMT10 163 (K) AVSETPAVPPVsEDEDDDDDDAtPPPVIAPRPEHTK (S) AVS(0.0)ET(0.0)PAVPPVS(0.99)EDEDDDDDDAT(0.99)PPPVIAPRPEHT(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T PAK1 62087.3 2 13 272.2 393.22 HUMAN 1 4.2788 12.2346 DDDEEDDSEEEAMET-p P19338;S206-p DDDEEDDSEEEAMET 0.961261717654481 0.00162286863808758 -0.0266666666666667 1.60333333333333 0.329304850464848 44.6029305064124 -0.0266666666666667 1.60333333333333 0.926978187430462 3.46502960348183e-05 -0.0959967433871129 12.4089064371368 P19338 NCL P19338.S206.p_NCL P19338_S206s _1_1_206_206 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15003.15211.4 27.7 24.73 5.502 4 1 1 0 1246.97 4904.8867 S206s TMT10 177 (K) AAAAAPASEDEDDEDDEDDEDDDDDEEDDsEEEAMETTPAK (G) AAAAAPAS(0.0)EDEDDEDDEDDEDDDDDEEDDS(0.99)EEEAMET(0.0)T(0.0)PAK K:TMT10,s:Phosphorylated S NCL 76670.1 6 9 114.1 570.88 HUMAN 1 -0.3293 44.6029 DDDFETDSDDLIEMT-p O14647;S242-p DDDFETDSDDLIEMT 0.936107507392066 0.00618650355766278 -0.0243333333333333 0.533666666666667 0.562172747719414 31.8269953557562 -0.0243333333333333 0.533666666666667 0.878582857435239 0.000656599374130017 -0.160134960285052 6.99584639856317 O14647 CHD2 O14647.S242.p_CHD2 O14647_T240tS242s_2_2_240_242 O14647 O14647|O14647-2|B7Z3I4|O14647-3|A0A0D9SGK0 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25721.25721.4 21.58 21.58 1.111 7 2 2 0 1272.5521 4927.2566 T240t S242s TMT10 229 (K) NVSYKEDDDFEtDsDDLIEMTGEGVDEQQDNSETIEK (V) NVS(0.0)Y(0.0)KEDDDFET(0.99)DS(0.99)DDLIEMT(0.0)GEGVDEQQDNS(0.0)ET(0.0)IEK K:TMT10,t:Phosphorylated T,s:Phosphorylated S CHD2 212309.6 5 14 482.1 298.11 HUMAN 1 -0.5622 31.827 DDDFFPSSGEEAEAA-p Q03468;S430-p DDDFFPSSGEEAEAA 0.627993569436905 0.199243039698926 0.0666666666666667 0.175 3.7534445605447 9.21879010030679 0.0666666666666667 0.175 0.421362171930166 0.119707397733771 0.869696827639647 1.84556166014918 Q03468 ERCC6 Q03468.S430.p_ERCC6 Q03468_S429sS430s_2_2_429_430 Q03468 Q03468|P0DP91 DNA excision repair protein ERCC-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23930.24356.4 27.74 23.33 8.203 3 2 2 0 1042.9983 4009.0394 S429s S430s TMT10 416 (K) KVPVQEIDDDFFPssGEEAEAASVGEGGGGGRK (V) KVPVQEIDDDFFPS(0.99)S(0.99)GEEAEAAS(0.0)VGEGGGGGRK K:TMT10,s:Phosphorylated S ERCC6 169554.2 12 13 403.1 327.23 HUMAN 1 3.7534 9.2188 DDDGDKWSLLLNGRD-p P35670;S1453-p DDDGDKWSLLLNGRD 0.942893505001481 0.0630111887283395 -0.015 -0.237 0.503396794808461 15.9836873602993 -0.015 -0.237 0.89055412685268 0.025213391303133 -0.144209028284132 -3.06289721625947 P35670 ATP7B P35670.S1453.p_ATP7B P35670_S1453s _1_1_1453_1453 P35670 P35670|P35670-4|B7ZLR4|F5H748|E7ET55|P35670-3|P35670-2|F5H562 Copper-transporting ATPase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24806.24806.4 16.43 16.43 3.945 3 1 1 0 839.9029 3276.6173 S1453s TMT10 1441 (R) HSAAADDDGDKWsLLLNGRDEEQYI (-) HS(0.0)AAADDDGDKWS(0.99)LLLNGRDEEQY(0.0)I K:TMT10,s:Phosphorylated S ATP7B 158914.5 3 4 3470.1 50.21 HUMAN 1 -0.5034 -15.9837 DDDLDVESDFDDASI-p F5GWX5;S312-p DDDLDVESDFDDASI 0.578850059128565 0.157003795114024 0.0756666666666667 0.176666666666667 4.36608881605578 10.5742915628617 0.0756666666666666 0.176666666666667 0.365924188510368 0.0876134624280641 0.986492333664398 2.08078902279911 F5GWX5 CHD4 F5GWX5.S312.p_CHD4 F5GWX5_S312s _1_1_312_312 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22981.22981.3 27.25 27.25 2.407 12 1 1 0 1204.1552 3530.4888 S312s TMT10 301 (R) SSSEDDDLDVEsDFDDASINSYSVSDGSTSR (S) S(0.0)S(0.0)S(0.0)EDDDLDVES(0.99)DFDDAS(0.0)INS(0.0)Y(0.0)S(0.0)VS(0.0)DGS(0.0)T(0.0)S(0.0)R s:Phosphorylated S CHD4 218583 4 6 49.1 753.68 HUMAN 1 4.3661 10.5743 DDDLLSSSEEECKDR-p P50402;S143-p DDDLLSSSEEECKDR 0.255523666986709 0.467501607236647 -0.176666666666667 -0.09 11.2661860385363 4.40227182349177 -0.176666666666667 -0.09 0.0747104575457089 0.362888175878228 -2.2028101636961 -0.993103804173126 P50402 EMD P50402.S143.p_EMD P50402_S141sS142sS143s_3_3_141_143 P50402 P50402|Q5HY57 Emerin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21617.21826.4 24.5 19.21 24.503 6 3 3 0 1032.9333 3888.8023 S141s S142s S143s TMT10 119 (R) QSVTSFPDADAFHHQVHDDDLLsssEEECK (D) QS(0.0)VT(0.0)S(0.0)FPDADAFHHQVHDDDLLS(0.99)S(0.99)S(0.99)EEECK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EMD 29050.4 5 13 483.1 297.25 HUMAN 1 -11.2662 -4.4023 DDDLVEFSDLESEDD-p Q9HCK8;S1420-p DDDLVEFSDLESEDD 0.123970002242006 0.935025968158778 0.280333333333333 -0.00866666666666664 18.8486806434558 0.411604053179191 0.280333333333333 -0.00866666666666663 0.0130356273163095 0.909577261047544 3.63610516778677 -0.118977244953939 Q9HCK8 CHD8 Q9HCK8.S1420.p_CHD8 Q9HCK8_S1420sS1424s_2_2_1420_1424 Q9HCK8 Q9HCK8|Q9HCK8-2 Chromodomain-helicase-DNA-binding protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21849.21849.5 18.66 16.29 18.656 4 2 2 0 723.3278 3452.6858 S1420s S1424s TMT10 1407 (R) HFSTLKDDDLVEFsDLEsEDDERPR (S) HFS(0.0)T(0.0)LKDDDLVEFS(0.99)DLES(0.99)EDDERPR K:TMT10,s:Phosphorylated S CHD8 292339.6 3 14 419.1 320.67 HUMAN 1 18.8487 -0.4116 DDDSDPESETDPDAQ-p Q5XUX1;S22-p DDDSDPESETDPDAQ 0.801084267106029 0.0656866747476495 0.044 0.290666666666667 1.85409942100046 15.7354170030525 0.044 0.290666666666667 0.652514336243364 0.0266967441668627 0.476243274567922 3.01546364497569 Q5XUX1 FBXW9 Q5XUX1.S22.p_FBXW9 Q5XUX1_S18sS22s_2_2_18_22 Q5XUX1 Q5XUX1|Q5XUX1-2|Q5XUX1-3|K7EL01 F-box/WD repeat-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.11986.11986.2 13.53 13.53 1.112 4 2 2 0 1255.9709 2350.9996 S18s S22s Hydrogen 13 (R) TWDDDsDPEsETDPDAQAK (A) T(0.0)WDDDS(0.99)DPES(0.99)ET(0.0)DPDAQAK K:TMT10-Lys-Only,s:Phosphorylated S FBXW9 54798.8 7 3 2578.1 77.92 HUMAN 1 1.8541 15.7354 DDEAEEESDNELSSG-p Q5R372-3;S502-p DDEAEEESDNELSSG 0.389389394272965 0.0105367391838264 -0.282666666666667 0.401333333333333 7.57685003024806 27.7381135521659 -0.282666666666667 0.401333333333333 0.174708886986535 0.00168340512408796 -1.56165683897466 5.76414553641687 Q5R372 RABGAP1L Q5R372.3.S502.p_RABGAP1L Q5R372-3_S502s_1_1_502_502 Q5R372-3 Q5R372-3|Q5R372-2|A0A0U1RRM5 Isoform 3 of Rab GTPase-activating protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16399.16399.5 27.91 27.91 2.437 10 1 1 0 999.2496 4911.2576 S502s N504n TMT10 475 (R) ESDKEEPVTPTSGGGPMSPQDDEAEEEsDnELSSGTGDVSK (D) ES(0.0)DKEEPVT(0.0)PT(0.0)S(0.0)GGGPMS(0.0)PQDDEAEEES(0.99)DN(1.0)ELS(0.0)S(0.0)GT(0.0)GDVS(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated RABGAP1L 94912.9 3 5 2342.1 87.2 HUMAN 1 -7.5769 27.7381 DDEDFVPSDASPPKT-p P11388-2;S1377-p DDEDFVPSDASPPKT 0.911465612820984 0.819502386482039 -0.0513333333333334 0.0583333333333334 0.788836503896589 1.20969461638522 -0.0513333333333334 0.0583333333333334 0.833904561796562 0.756886115243909 -0.220037957275476 0.325648365240216 P11388 TOP2A P11388.2.S1377.p_TOP2A P11388-2_S1377sS1380s_2_2_1377_1380 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17072.17072.3 12.83 12.83 5.694 4 2 2 0 899.4337 2536.3386 S1377s S1380s TMT10 1369 (K) TDDEDFVPsDAsPPKTK (T) T(0.0)DDEDFVPS(0.99)DAS(0.99)PPKT(0.0)K K:TMT10,s:Phosphorylated S TOP2A 178239.3 1 20 71.2 658.36 HUMAN 1 -0.7888 1.2097 DDEEEDDSPPERQIV-p A0A087WZV0;S38-p DDEEEDDSPPERQIV 0.198300279868763 0.0983393223723203 0.215 0.204666666666667 13.69058387841 13.3152289309713 0.215 0.204666666666667 0.0427505407190237 0.0466097857796145 2.63628276795289 2.56657848547415 A0A087WZV0 PPIP5K2 A0A087WZV0.S38.p_PPIP5K2 A0A087WZV0_S38s _1_1_38_38 A0A087WZV0 A0A087WZV0|O43314|O43314-2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6902.6902.3 24.23 24.23 99 1 1 1 0 921.3665 2682.1178 S38s TMT10 23 (R) HFFHHADEDDEEEDDsPPER (Q) HFFHHADEDDEEEDDS(1.0)PPER s:Phosphorylated S PPIP5K2 145671.7 4 1 778.1 226.58 HUMAN 1 13.6906 13.3152 DDEEVHGSSDDSKQS-p Q03188;S709-p DDEEVHGSSDDSKQS 0.811946613276641 0.0439711539603473 0.056 0.289833333333333 1.73917826131442 18.1699346610534 0.056 0.289833333333333 0.670011371832934 0.0152407568311248 0.450233843237372 3.4938443438625 Q03188 CENPC Q03188.S709.p_CENPC Q03188_S709sS710s_2_2_709_710 Q03188 Q03188 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7063.7063.3 13.03 13.03 3.858 3 2 2 0 789.3216 2206.0148 S709s S710s TMT10 699 (K) NDVDDEEVHGssDDSK (Q) NDVDDEEVHGS(0.99)S(0.99)DDS(0.0)K K:TMT10,s:Phosphorylated S CENPC 107459.5 4 27 209.1 442.77 HUMAN 2 1.7392 18.1699 DDENKPPSPKEIRIE-p Q9UHJ3;S775-p DDENKPPSPKEIRIE 0.0238438053891232 0.00260393841721574 0.879333333333333 0.871666666666667 37.7296542544424 39.3631555174177 0.879333333333333 0.871666666666667 0.000168668729866467 0.000115793571201486 9.17525309865623 9.8485721274409 Q9UHJ3 SFMBT1 Q9UHJ3.S775.p_SFMBT1 Q9UHJ3_S775s _1_1_775_775 Q9UHJ3 Q9UHJ3|Q9UHJ3-2 Scm-like with four MBT domains protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17485.17485.3 16.54 13.11 6.268 4 1 1 0 821.7518 2383.2749 S775s TMT10 763 (R) TFSFSDDENKPPsPK (E) T(0.0)FS(0.0)FS(0.0)DDENKPPS(0.99)PK K:TMT10,s:Phosphorylated S SFMBT1 99737.2 6 4 3632.1 46.53 HUMAN 1 37.7297 39.3632 DDESKSESDLEETEP-p Q02880;S1344-p DDESKSESDLEETEP 0.532941023714546 0.232463157616163 -0.181333333333333 0.542333333333333 5.05795200402871 8.34600048919895 -0.181333333333333 0.542333333333333 0.312036070101384 0.146352434492376 -1.11466759765202 1.6945738127056 Q02880 TOP2B Q02880.S1344.p_TOP2B Q02880_S1344s _1_1_1344_1344 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20932.20932.2 16.95 16.95 2.773 3 1 1 0 1004.9891 1929.0014 S1344s TMT10 1342 (K) SEsDLEETEPVVIPR (D) S(0.0)ES(0.99)DLEET(0.0)EPVVIPR s:Phosphorylated S TOP2B 184233.7 2 31 71.1 658.36 HUMAN 1 -5.058 8.346 DDFASDGSSSREDLS-p Q92805;S50-p DDFASDGSSSREDLS 0.696853109927181 0.0350379532419149 0.0713333333333333 0.449666666666667 2.94672063477242 19.5945967154908 0.0713333333333333 0.449666666666667 0.507373682419149 0.0109784323092254 0.709569727684262 3.78902739893299 Q92805 GOLGA1 Q92805.S50.p_GOLGA1 Q92805_S41sS47sS50s_3_3_41_50 Q92805 Q92805 Golgin subfamily A member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25959.25959.3 10.18 10.18 1.205 9 3 3 0 1215.8253 3405.555 S41s S47s S50s TMT10 32 (K) ESVASMGADsGDDFAsDGsSSREDLSSQLLR (R) ES(0.0)VAS(0.0)MGADS(0.99)GDDFAS(0.99)DGS(0.99)S(0.0)S(0.0)REDLS(0.0)S(0.0)QLLR s:Phosphorylated S GOLGA1 88297 1 7 1691.1 120.73 HUMAN 1 2.9467 19.5946 DDGIQADSGPINDTD-p P55210;S199-p DDGIQADSGPINDTD 0.189459200159144 0.194694282046569 0.422333333333333 0.395333333333333 14.1440964775943 9.3436628321424 0.422333333333333 0.395333333333333 0.0385114927087808 0.116314462144954 2.71941339337998 1.86717064365677 P55210 CASP7 P55210.S199.p_CASP7 P55210_S199s _1_1_199_199 P55210 A0A0A0MRL7|P55210-3 Caspase-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16337.16337.3 21.05 21.05 7.327 3 1 1 0 894.0711 2600.2273 S199s TMT10 188 (R) GTELDDGIQADsGPINDTDANPR (Y) GT(0.0)ELDDGIQADS(0.99)GPINDT(0.0)DANPR s:Phosphorylated S CASP7 34903.8 1 3 3253.1 55.79 HUMAN 1 14.1441 9.3437 DDGKLDLSVVENGGL-p Q99986;S342-p DDGKLDLSVVENGGL 0.656937444442563 0.946863597084931 -0.0733333333333333 -0.00899999999999999 3.42471278187647 0.338472615506683 -0.0733333333333334 -0.009 0.454494593950592 0.925023441262655 -0.805431542771199 -0.0985671756293624 Q99986 VRK1 Q99986.S342.p_VRK1 Q99986_S342s _1_1_342_342 Q99986 Q99986 Serine/threonine-protein kinase VRK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23374.23374.4 13 13 6.622 2 1 1 0 778.6884 3031.7809 S342s TMT10 330 (K) AIGSKDDGKLDLsVVENGGLK (A) AIGS(0.0)KDDGKLDLS(0.99)VVENGGLK K:TMT10,s:Phosphorylated S VRK1 45817.5 2 1 2921.1 65.92 HUMAN 1 -3.4247 -0.3385 DDGNELGSGIMELTD-p Q8WU20;S35-p DDGNELGSGIMELTD 0.336200474871642 0.370438866992211 -0.133333333333333 0.0933333333333334 8.82490834674212 5.72069342288911 -0.133333333333333 0.0933333333333334 0.131071770338528 0.267874058548281 -1.77805417818511 1.23436233949341 Q8WU20 FRS2 Q8WU20.S35.p_FRS2 Q8WU20_S35s_1_1_35_35 Q8WU20 Q8WU20 Fibroblast growth factor receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.34044.34044.3 13.8 13.8 13.803 5 1 1 0 1140.8918 3324.6718 S35s M38m TMT10 23 (K) VINVDDDGNELGsGImELTDTELILYTR (K) VINVDDDGNELGS(0.99)GIM(1.0)ELT(0.0)DT(0.0)ELILY(0.0)T(0.0)R s:Phosphorylated S,m:Oxidized methionine FRS2 57427.4 1 1 301.1 376.53 HUMAN 1 -8.8249 5.7207 DDGPDFLSEEDRGLK-p Q9UNH7;S13-p DDGPDFLSEEDRGLK 0.757454434253509 0.151689811407285 0.044 0.170333333333333 2.31010794632095 10.7681735911653 0.044 0.170333333333333 0.587474750335018 0.0837881575936182 0.57643282836308 2.11461279442958 Q9UNH7 SNX6 Q9UNH7.S13.p_SNX6 Q9UNH7_S13s _1_1_13_13 Q9UNH7 Q9UNH7 Sorting nexin-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30881.30881.3 14.21 14.21 99 1 1 1 0 869.0524 2525.1737 S13s Acetyl 1 (-) MMEGLDDGPDFLsEEDRGLK (A) MMEGLDDGPDFLS(1.0)EEDRGLK K:TMT10,s:Phosphorylated S SNX6 46933.2 1 1 3564.1 48.1 HUMAN 1 2.3101 10.7682 DDHESCGSNSTNRST-p Q7Z7G8;S105-p DDHESCGSNSTNRST 0.247049795569645 0.0546365883779223 -0.227 -0.252333333333333 11.5948605665625 16.8306684754061 -0.227 -0.252333333333333 0.0692650167123421 0.0207459416688236 -2.26067331821099 -3.2269291609948 Q7Z7G8 VPS13B Q7Z7G8.S105.p_VPS13B Q7Z7G8_S102sS105s_2_2_102_105 Q7Z7G8 Q7Z7G8|Q7Z7G8-6|Q7Z7G8-2|Q7Z7G8-3|Q7Z7G8-4|Q7Z7G8-5 Vacuolar protein sorting-associated protein 13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9111.9111.3 13.33 13.33 1.122 4 2 2 0 917.7321 2591.252 S102s S105s TMT10 92 (K) LKDGIQDDHEsCGsNSTNR (S) LKDGIQDDHES(0.99)CGS(0.99)NS(0.0)T(0.0)NR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S VPS13B 454589.9 2 15 766.1 229.13 HUMAN 1 -11.5949 -16.8307 DDHLNKRSRSSSMSS-p A8CG34;S366-p DDHLNKRSRSSSMSS 0.0736363180839669 0.188779380777745 -0.573666666666667 -0.259333333333333 24.3199058016651 9.52217625948525 -0.573666666666667 -0.259333333333333 0.00369836201428712 0.111630372527819 -4.87356650488742 -1.89807517582605 A8CG34 NotFound A8CG34.S366.p_NotFound A8CG34_S366s _1_1_366_366 A8CG34 Q96HA1|A8CG34|A0A075B7F8|Q96HA1-3|A8CG34-2|A0A087WY75|Q96HA1-2 Nuclear envelope pore membrane protein POM 121C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4272.4272.5 10.22 6.73 3.268 4 1 1 0 502.4621 2428.3169 S366s TMT10 351 (K) RGLNSQSSDDHLNKRsR (S) RGLNS(0.0)QS(0.0)S(0.0)DDHLNKRS(0.99)R K:TMT10,s:Phosphorylated S POM121C 125455.9 1 16 133.2 532.02 HUMAN 1 -24.3199 -9.5222 DDIDLFGSDDEEESE-p P24534;S106-p DDIDLFGSDDEEESE 0.306452172412958 0.147228921248642 -0.183333333333333 0.152 9.61661381837858 10.9523971044054 -0.183333333333333 0.152 0.109229166119384 0.0803082735355616 -1.91517313997101 2.14680874367997 P24534 EEF1B2 P24534.S106.p_EEF1B2 P24534_S106s _1_1_106_106 P24534 P24534 Elongation factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21185.21185.5 33 33 3.609 8 1 1 0 1150.3528 5667.7694 S106s TMT10 74 (K) KALGKYGPADVEDTTGSGATDSKDDDDIDLFGsDDEEESEEAK (R) KALGKY(0.0)GPADVEDT(0.0)T(0.0)GS(0.0)GAT(0.0)DS(0.0)KDDDDIDLFGS(0.99)DDEEES(0.0)EEAK K:TMT10,s:Phosphorylated S EEF1B2 24934.4 28 4 484.1 296.88 HUMAN 1 -9.6166 10.9524 DDIDLFGSDNEEEDK-p E9PRY8;S578-p DDIDLFGSDNEEEDK 0.248650960362662 0.691227418111315 -0.210333333333333 0.0436666666666667 11.5392585977163 2.19930713648495 -0.210333333333333 0.0436666666666667 0.070157505701125 0.602655724725626 -2.25086818878359 0.552434659676776 E9PRY8 NotFound E9PRY8.S578.p_NotFound E9PRY8_S578s _1_1_578_578 E9PRY8 E9PRY8|P29692-2|A0A087X1X7|P29692-4|P29692-3|E9PQZ1 Elongation factor 1-delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20036.20036.4 32.01 24.44 32.008 2 1 1 0 1164.5616 4575.2556 S578s TMT10 553 (R) QVEPPAKKPATPAEDDEDDDIDLFGsDNEEEDK (E) QVEPPAKKPAT(0.0)PAEDDEDDDIDLFGS(0.99)DNEEEDK K:TMT10,s:Phosphorylated S EEF1D 77196.2 55 8 369.1 339.47 HUMAN 1 -11.5393 2.1993 DDIEDGDSMISSATS-p Q86U86;S498-p DDIEDGDSMISSATS 0.246863210495205 0.198963180572395 0.212666666666667 0.205333333333333 11.6220121117983 9.22726749169538 0.212666666666667 0.205333333333333 0.0688333313596655 0.119473957820928 2.26546387505742 1.8470284618921 Q86U86 PBRM1 Q86U86.S498.p_PBRM1 Q86U86_S498s _1_1_498_498 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-9|Q86U86-3|Q86U86-7|Q86U86-4|Q86U86-5|Q86U86-6 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15328.15328.3 21.2 21.2 1.344 7 1 1 0 932.7567 2716.2984 S498s TMT10 490 (R) RDDIEDGDsMISSATSDTGSAK (R) RDDIEDGDS(0.99)MIS(0.0)S(0.0)AT(0.0)S(0.0)DT(0.0)GS(0.0)AK K:TMT10,s:Phosphorylated S PBRM1 194199.5 1 10 194.1 462.54 HUMAN 1 11.622 9.2273 DDIKRVYSLFLDESR-p Q9Y230;S431-p DDIKRVYSLFLDESR 0.864896220681852 0.392680368233284 -0.0376666666666667 0.123333333333333 1.22641888636867 5.39632038900873 -0.0376666666666667 0.123333333333333 0.753977023272503 0.288647606812789 -0.329747089445122 1.17596160025796 Q9Y230 RUVBL2 Q9Y230.S431.p_RUVBL2 Q9Y230_S431s _1_1_431_431 Q9Y230 Q9Y230|Q9Y230-2 RuvB-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28934.28934.2 14.26 8 2.435 3 1 1 0 769.3793 1457.7838 S431s TMT10 429 (R) VYsLFLDESR (S) VY(0.0)S(0.99)LFLDES(0.0)R s:Phosphorylated S RUVBL2 51326.8 3 6 1680.1 121.4 HUMAN 1 -1.2264 5.3963 DDILGEGSDDSDSEK-p Q9Y5B0;S869-p DDILGEGSDDSDSEK 0.14818930449578 0.0093305335540636 -0.246666666666667 0.464333333333333 16.822143030605 28.6604538075486 -0.246666666666667 0.464333333333333 0.0207867071178127 0.00136130242839156 -3.22768593746908 6.02569866857835 Q9Y5B0 CTDP1 Q9Y5B0.S869.p_CTDP1 Q9Y5B0_S869s _1_1_869_869 Q9Y5B0 Q9Y5B0|A0A0A0MR03 RNA polymerase II subunit A C-terminal domain phosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20109.20109.3 15.35 13.42 2.348 3 1 1 0 783.3528 2268.0767 S869s TMT10 860 (K) EVDDILGEGsDDSDSEK (R) EVDDILGEGS(0.99)DDS(0.0)DS(0.0)EK K:TMT10,s:Phosphorylated S CTDP1 105367.3 2 5 1257.1 161.48 HUMAN 1 -16.8221 28.6605 DDKEAPDSDAEGYVE-p H0YN26;S158-p DDKEAPDSDAEGYVE 0.978530252693676 0.715310489505581 -0.00300000000000001 0.0523333333333333 0.187229496976136 2.0015954053417 -0.00421503563892293 0.0523333333333334 0.957804890733745 0.630725601299879 -0.0554038341649224 0.509096199689691 H0YN26 NotFound H0YN26.S158.p_NotFound H0YN26_S158s _1_1_158_158 H0YN26 H0YN26 Acidic leucine-rich nuclear phosphoprotein 32 family member A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.31423.31423.4 14.4 14.4 5.689 5 1 1 0 1247.301 4906.2114 S158s TMT10 138 (K) LLPQLTYLDGYDRDDKEAPDsDAEGYVEGLDDEEEDEDGG (-) LLPQLT(0.0)Y(0.0)LDGY(0.0)DRDDKEAPDS(0.99)DAEGY(0.0)VEGLDDEEEDEDGG K:TMT10,s:Phosphorylated S ANP32A 20111 1 4 3539.1 48.78 HUMAN 1 -0.1872 2.0016 DDKLNKKSPPLVKAC-p A0A0U1RR27;S1284-p DDKLNKKSPPLVKAC 0.287161977647915 0.276787387394678 -0.167333333333333 -0.107 10.2174991198434 7.3503980429386 -0.167333333333333 -0.107 0.0951152356057508 0.184060329734053 -2.01952410960444 -1.52177805504278 A0A0U1RR27 NotFound A0A0U1RR27.S1284.p_NotFound A0A0U1RR27_S1284s _1_1_1284_1284 A0A0U1RR27 A0A0U1RR27|Q7Z401-2 C-myc promoter-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13020.13020.4 11.4 5.31 99 1 1 1 0 735.4357 2858.751 S1284s TMT10 1275 (R) ACDDKLNKKsPPLVK (A) ACDDKLNKKS(1.0)PPLVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DENND4A 217514.7 6 10 399.1 328.24 HUMAN 1 -10.2175 -7.3504 DDKVAILTDDEEEQK-p Q6ZSS7;T10-p DDKVAILTDDEEEQK 0.948754976233882 0.00473926529764594 -0.0143333333333333 -0.563333333333333 0.452939823136818 34.0008049873552 -0.0143333333333333 -0.563333333333333 0.900961053221062 0.000398033386162262 -0.130399372117002 -7.73352092200609 Q6ZSS7 MFSD6 Q6ZSS7.T10.p_MFSD6 Q6ZSS7_T10t _1_1_10_10 Q6ZSS7 Q6ZSS7 Major facilitator superfamily domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18746.18746.2 17.96 14.15 99 1 1 1 0 964.4866 1848.0002 T10t TMT10 6 (K) VAILtDDEEEQK (R) VAILT(1.0)DDEEEQK K:TMT10,t:Phosphorylated T MFSD6 88828 8 1 2690.1 73.9 HUMAN 1 -0.4529 -34.0008 DDLDVVLSPQRRSFG-p Q9NRA8;S115-p DDLDVVLSPQRRSFG 0.306735184126758 0.0016237919479163 -0.188 -0.87 9.599077276491 44.4992965573998 -0.188 -0.87 0.109671118406699 3.54870864305948e-05 -1.91213259674309 -12.3527570018693 Q9NRA8 EIF4ENIF1 Q9NRA8.S115.p_EIF4ENIF1 Q9NRA8_S115s _1_1_115_115 Q9NRA8 Q9NRA8-3|B1AKL4 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16392.16392.4 11.99 7.27 99 1 1 1 0 577.5693 2227.2811 S115s TMT10 105 (R) VKEDDLDVVLsPQRR (S) VKEDDLDVVLS(1.0)PQRR K:TMT10,s:Phosphorylated S EIF4ENIF1 108541.3 2 4 150.1 511.59 HUMAN 1 -9.5991 -44.4993 DDLGLPPSPGDTSYY-p Q9NQZ2;S37-p DDLGLPPSPGDTSYY 0.943595440034975 0.181752681670889 -0.0106666666666667 0.139 0.496625284187363 9.74104344827077 -0.0106666666666667 0.139 0.891943760089015 0.106144050184676 -0.142363218446218 1.93599375474343 Q9NQZ2 UTP3 Q9NQZ2.S37.p_UTP3 Q9NQZ2_S37s _1_1_37_37 Q9NQZ2 Q9NQZ2 Something about silencing protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23878.24594.4 31.68 31.68 3.817 7 1 1 0 1051.2142 4121.8686 S37s TMT10 20 (K) AGPTLTDENGDDLGLPPsPGDTSYYQDQVDDFHEAR (S) AGPT(0.0)LT(0.0)DENGDDLGLPPS(0.99)PGDT(0.0)S(0.0)Y(0.0)Y(0.0)QDQVDDFHEAR s:Phosphorylated S UTP3 54671.1 10 1 1963.1 105.04 HUMAN 1 -0.4966 9.741 DDLKHTRSEMVELNR-p F8W1S1;S356-p DDLKHTRSEMVELNR 0.603085598910672 0.00839507320642349 -0.171333333333333 0.482666666666667 4.05619199531299 29.5058562371355 -0.171333333333333 0.485344971032034 0.392989367465925 0.00112050648990765 -0.927855619499577 6.27344797384471 F8W1S1 NotFound F8W1S1.S356.p_NotFound F8W1S1_T354tS356s_2_2_354_356 F8W1S1 F8W1S1|Q7RTS7 Keratin, type II cytoskeletal 74 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10324.10324.2 8.55 4.34 99 2 2 2 0 1144.047 2111.1705 T354t S356s M358m TMT10 353 (K) HtRsEmVELNRLIQR (I) HT(1.0)RS(1.0)EM(1.0)VELNRLIQR t:Phosphorylated T,s:Phosphorylated S,m:Oxidized methionine KRT74 59862.6 1 3 69.6 672.47 HUMAN 1 -4.0562 29.5059 DDLKRAESMLQQADK-p P13797;S339-p DDLKRAESMLQQADK 0.312808396386622 0.0369181497054097 -0.186 -0.293666666666667 9.44354270675061 19.2632874995435 -0.186 -0.293666666666667 0.113669965799187 0.0118487149081576 -1.88517462282406 -3.71927950263686 P13797 PLS3 P13797.S339.p_PLS3 P13797_S339s _1_1_339_339 P13797 P13797 Plastin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11840.11840.4 8.57 7.81 99 1 1 1 0 454.4867 1734.9573 S339s TMT10 336 (K) RAEsMLQQADK (L) RAES(1.0)MLQQADK K:TMT10,s:Phosphorylated S PLS3 71323.2 2 3 3150.1 59.17 HUMAN 1 -9.4435 -19.2633 DDLKVELSQLRVAKV-p P42766;S29-p DDLKVELSQLRVAKV 0.758950161718988 0.121000600441424 -0.0483333333333333 -0.188666666666667 2.29486442871611 12.0920980671987 -0.0483333333333334 -0.188666666666667 0.589540380131176 0.0617717909865143 -0.573155089771662 -2.34749902157663 P42766 RPL35 P42766.S29.p_RPL35 P42766_S29s _1_1_29_29 P42766 P42766|F2Z388 60S ribosomal protein L35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25362.25362.3 11.52 11.52 99 1 1 1 0 699.058 2015.1901 S29s TMT10 20 (K) QLDDLKVELsQLR (V) QLDDLKVELS(1.0)QLR K:TMT10,s:Phosphorylated S RPL35 14551.2 2 1 5433.1 19.35 HUMAN 1 -2.2949 -12.0921 DDLLGKESPSKDSEP-p Q99569;S776-p DDLLGKESPSKDSEP 0.206718993252533 0.00363879152855353 -0.303666666666667 0.767 13.2339178693248 36.2320878546938 -0.303666666666667 0.767 0.0474906608583236 0.000238117445331908 -2.55330435827102 8.55904152869424 Q99569 PKP4 Q99569.S776.p_PKP4 Q99569_S776s _1_1_776_776 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33376.33376.5 24.36 24.36 1.416 4 1 1 0 797.6232 3904.1184 S776s TMT10 762 (R) LLGLNELDDLLGKEsPSKDSEPSCWGK (K) LLGLNELDDLLGKES(0.99)PS(0.0)KDS(0.0)EPS(0.0)CWGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PKP4 132664.7 13 23 122.1 546.31 HUMAN 1 -13.2339 36.2321 DDLLTPCSPGDPGAI-p O75351;S385-p DDLLTPCSPGDPGAI 0.705121349096934 0.115200084041792 0.0553333333333333 0.188 2.85363242189705 12.3822377849668 0.0553333333333333 0.188 0.518366298039927 0.0577798249145482 0.690523300910012 2.39908006300269 O75351 VPS4B O75351.S385.p_VPS4B O75351_S385s _1_1_385_385 O75351 O75351 Vacuolar protein sorting-associated protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35726.35726.3 21.4 21.4 1.932 3 1 1 0 1367.9745 4021.9386 S385s TMT10 371 (R) ADPNHLVDDLLTPCsPGDPGAIEMTWMDVPGDK (L) ADPNHLVDDLLT(0.0)PCS(0.99)PGDPGAIEMT(0.0)WMDVPGDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VPS4B 49472.3 8 3 757.1 230.65 HUMAN 1 2.8536 12.3822 DDLLTPCSPGDPGAM-p Q9UN37;S378-p DDLLTPCSPGDPGAM 0.612656521429069 0.0982134920581637 0.0836666666666667 0.282666666666667 3.94503658347757 13.3219336494022 0.0836666666666667 0.282666666666667 0.403177550199764 0.0465378842471285 0.906608636600104 2.56779194559822 Q9UN37 VPS4A Q9UN37.S378.p_VPS4A Q9UN37_S378s _1_1_378_378 Q9UN37 Q9UN37 Vacuolar protein sorting-associated protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37252.37252.4 26.27 21.01 1.833 5 1 1 0 1037.7124 4067.8643 S378s TMT10 364 (R) TNPSMMIDDLLTPCsPGDPGAMEMTWMDVPGDK (L) T(0.0)NPS(0.0)M(0.0)M(0.0)IDDLLT(0.0)PCS(0.99)PGDPGAM(0.0)EM(0.0)T(0.0)WM(0.0)DVPGDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VPS4A 49182.3 3 2 1671.1 122.19 HUMAN 1 3.945 13.3219 DDLNNYDSDDQEKQS-p P30622;S1364-p DDLNNYDSDDQEKQS 0.608614569489372 0.751890378356644 -0.071 -0.035 3.99387662637869 1.71099970074833 -0.071 -0.035 0.398668881195976 0.674372776227624 -0.915958944785275 -0.443756196325466 P30622 CLIP1 P30622.S1364.p_CLIP1 P30622_S1364s_1_1_1364_1364 P30622 P30622|P30622-1|P30622-2|J3KP58|F5H0N7|F5H6H4 CAP-Gly domain-containing linker protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22649.22649.3 24.35 22.17 1.153 3 1 1 0 1301.252 3820.7919 N1355n S1364s TMT10 1342 (K) MKVEMMSEAALNGnGDDLNNYDsDDQEK (Q) MKVEMMS(0.0)EAALN(0.0)GN(0.99)GDDLN(0.0)N(0.0)Y(0.0)DS(0.99)DDQEK K:TMT10,n:Deamidated,s:Phosphorylated S CLIP1 162985.2 30 15 372.1 339.16 HUMAN 1 -3.9939 -1.711 DDNISNDSNDFTEVE-p F8VX04;S28-p DDNISNDSNDFTEVE 0.676544499697039 0.136575128871702 -0.056 -0.159 3.17827728311132 11.3920719146364 -0.056 -0.159 0.481030120935557 0.0725759632345399 -0.756395551842104 -2.22390108156269 F8VX04 SLC38A1 F8VX04.S28.p_SLC38A1 F8VX04_S25sS28s_2_2_25_28 F8VX04 F8VX04|Q9H2H9 Sodium-coupled neutral amino acid transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31896.31896.3 20.85 20.85 1.152 7 2 2 0 1572.3754 4555.167 S25s S28s TMT10 6 (K) SGLELTELQNMTVPEDDNIsNDsNDFTEVENGQINSK (F) S(0.0)GLELT(0.0)ELQNMT(0.0)VPEDDNIS(0.99)NDS(0.99)NDFT(0.0)EVENGQINS(0.0)K K:TMT10,s:Phosphorylated S SLC38A1 56936.1 37 4 2270.1 90.47 HUMAN 1 -3.1783 -11.3921 DDNKDIDSEKEAAME-p O14776;S638-p DDNKDIDSEKEAAME 0.838788690758696 0.758857944653842 0.0316666666666667 -0.0296666666666666 1.4774459453302 1.65458461920822 0.0316666666666667 -0.0296666666666666 0.711631896226698 0.68319005854162 0.389695555172674 -0.430824766418883 O14776 TCERG1 O14776.S638.p_TCERG1 O14776_S638s _1_1_638_638 O14776 O14776|O14776-2|G3V220 Transcription elongation regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20920.20920.3 18.67 18.67 99 1 1 1 0 816.0851 2366.2728 S638s TMT10 635 (K) DIDsEKEAAMEAEIK (A) DIDS(1.0)EKEAAMEAEIK K:TMT10,s:Phosphorylated S TCERG1 124127.1 6 2 1889.1 108.96 HUMAN 1 1.4774 -1.6546 DDNMEICTPDRSSPA-p P30414;T1133-p DDNMEICTPDRSSPA 0.8936599229671 0.278370689272814 0.0363333333333333 0.14 0.954052239103815 7.3174798799561 0.0363333333333333 0.14 0.802776731733262 0.185460750117295 0.262312868662868 1.51604183009968 P30414 NKTR P30414.T1133.p_NKTR P30414_T1133t_1_1_1133_1133 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33603.33603.5 16.3 16.3 0.36 7 1 1 0 1141.7301 5623.6676 N1107n T1133t TMT10 1089 (K) LSISPTALNTEENVACLQnIQHVEESVPNGVEDVLQTDDNMEICtPDR (S) LS(0.0)IS(0.0)PT(0.0)ALN(0.0)T(0.0)EEN(0.33)VACLQN(0.33)IQHVEES(0.0)VPN(0.0)GVEDVLQT(0.0)DDN(0.33)MEICT(0.99)PDR C:Carbamidomethylation,n:Deamidated,t:Phosphorylated T NKTR 166700.6 1 23 202.1 449.45 HUMAN 1 0.9541 7.3175 DDNWSLLSSEKGPSL-p Q9UKL3;S1383-p DDNWSLLSSEKGPSL 0.43497101841619 0.07721952599984 -0.313333333333333 -0.275333333333333 6.65950629688658 14.7572474440921 -0.313333333333333 -0.275333333333333 0.21579897140621 0.0334406919786231 -1.40126981483379 -2.83123457571987 Q9UKL3 CASP8AP2 Q9UKL3.S1383.p_CASP8AP2 Q9UKL3_S1383s _1_1_1383_1383 Q9UKL3 Q9UKL3|A0A087WTW5 CASP8-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27150.27150.3 13.06 13.06 1.353 4 1 1 0 721.6857 2083.0782 S1383s TMT10 1373 (K) MISDDNWSLLsSEK (G) MIS(0.0)DDNWS(0.0)LLS(0.99)S(0.0)EK K:TMT10,s:Phosphorylated S CASP8AP2 224993 1 11 740.1 234.21 HUMAN 1 -6.6595 -14.7572 DDPGQQETDSSEDED-p Q8IXQ4;T138-p DDPGQQETDSSEDED 0.624959963410799 0.0137900852034519 -0.0783333333333333 0.439 3.79462682401832 25.8348347635908 -0.0783333333333334 0.439 0.417385461582195 0.00260925499568334 -0.877662994164101 5.25152823223528 Q8IXQ4 GPALPP1 Q8IXQ4.T138.p_GPALPP1 Q8IXQ4_T138tS140sS141s_3_3_138_141 Q8IXQ4 Q8IXQ4|A0A0A0MRI1 GPALPP motifs-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21904.22116.3 14.75 14.75 99 3 3 3 0 1129.1378 3145.4996 T138t S140s S141s TMT10 129 (K) GRDDPGQQEtDssEDEDIIGPMPAK (G) GRDDPGQQET(1.0)DS(1.0)S(1.0)EDEDIIGPMPAK K:TMT10,t:Phosphorylated T,s:Phosphorylated S GPALPP1 38141.2 6 3 2555.1 78.73 HUMAN 1 -3.7946 25.8348 DDPSRYISPDQLADL-p P06733;S272-p DDPSRYISPDQLADL 0.438296535583627 0.850519848804093 0.117 0.0273333333333333 6.59659713046542 0.98849424445544 0.117 0.0273333333333334 0.218947649370899 0.796435437094382 1.39019795638234 0.270963187392189 P06733 ENO1 P06733.S272.p_ENO1 P06733_S272s _1_1_272_272 P06733 P06733|P06733-2 Alpha-enolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25929.25929.3 11.88 8.88 1.644 3 1 1 0 578.9572 1654.889 S272s Hydrogen 270 (R) YIsPDQLADLYK (S) Y(0.0)IS(0.99)PDQLADLY(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S ENO1 47510.4 6 10 623.1 259.34 HUMAN 1 6.5966 0.9885 DDPSYEQSSGEDDGG-p Q96BU1;S72-p DDPSYEQSSGEDDGG 0.345605365156858 0.778902624279418 -0.153 -0.103666666666667 8.57547133313421 1.50338077685021 -0.153 -0.103666666666667 0.138820264225164 0.707394896568719 -1.73487407029721 -0.39573763712211 Q96BU1 S100PBP Q96BU1.S72.p_S100PBP Q96BU1_S72s _1_1_72_72 Q96BU1 Q96BU1|Q96BU1-2 S100P-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5978.5978.4 9.53 9.53 1.208 4 1 1 0 765.8344 2980.3445 S72s TMT10 64 (K) EDDPSYEQsSGEDDGGHVEKGER (G) EDDPS(0.0)Y(0.0)EQS(0.99)S(0.0)GEDDGGHVEKGER K:TMT10,s:Phosphorylated S S100PBP 45923.5 1 1 3207.1 57.45 HUMAN 1 -8.5755 -1.5034 DDQDSEKSKPAGSDG-p Q1KMD3;S188-p DDQDSEKSKPAGSDG 0.391198751974399 0.00333043685977549 -0.159333333333333 0.657 7.52002199660971 37.0778508347373 -0.159333333333333 0.657 0.177009999290365 0.000195981427430294 -1.55176775243019 8.89156631766188 Q1KMD3 HNRNPUL2 Q1KMD3.S188.p_HNRNPUL2 Q1KMD3_S185sS188s_2_2_185_188 Q1KMD3 Q1KMD3|H3BQZ7 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10513.10513.5 13.58 8.65 2.315 6 2 2 0 968.4437 4678.2646 S185s S188s TMT10 161 (R) SGDETPGSEVPGDKAAEEQGDDQDsEKsKPAGSDGER (R) S(0.0)GDET(0.0)PGS(0.0)EVPGDKAAEEQGDDQDS(0.99)EKS(0.99)KPAGS(0.0)DGER K:TMT10,s:Phosphorylated S HNRNPUL2 85673.7 4 12 294.1 379.87 HUMAN 1 -7.52 37.0779 DDQHDYDSVASDEDT-p Q9Y2X7;S385-p DDQHDYDSVASDEDT 0.785321801685938 0.0647830590215447 0.0531666666666667 0.3165 2.02147078297566 15.8169735137622 0.0531666666666667 0.3165 0.627845696396136 0.0262000818831983 0.513551665936097 3.03101422240991 Q9Y2X7 GIT1 Q9Y2X7.S385.p_GIT1 Q9Y2X7_S385sS388s_2_2_385_388 Q9Y2X7 Q9Y2X7-3|A0A0C4DGN6 ARF GTPase-activating protein GIT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13381.13830.3 22.14 22.14 4.55 6 2 2 0 1123.7805 3209.3828 S385s S388s TMT10 373 (R) SQSDLDDQHDYDsVAsDEDTDQEPLR (S) S(0.0)QS(0.0)DLDDQHDY(0.0)DS(0.99)VAS(0.99)DEDT(0.0)DQEPLR s:Phosphorylated S GIT1 85081.2 4 33 474.2 301.74 HUMAN 2 2.0215 15.817 DDQLGEESEERDDHL-p P20645;S267-p DDQLGEESEERDDHL 0.744000442558004 0.768932504357497 0.057 0.063 2.44115755222331 1.57807737682929 0.057 0.063 0.570012323084969 0.695332073210872 0.604425513247195 0.413150790021154 P20645 M6PR P20645.S267.p_M6PR P20645_S267s _1_1_267_267 P20645 P20645|F5GX30 Cation-dependent mannose-6-phosphate receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21244.21244.3 12.13 12.13 99 1 1 1 0 884.0582 2570.1878 S267s TMT10 257 (R) GVGDDQLGEEsEERDDHLLPM (-) GVGDDQLGEES(1.0)EERDDHLLPM s:Phosphorylated S M6PR 31506.2 1 1 6351.1 12.13 HUMAN 1 2.4412 1.5781 DDQRGNLSGNSHKHK-p Q8TF01;S650-p DDQRGNLSGNSHKHK 0.109500745299266 0.0339299464827186 0.304333333333333 0.357666666666667 20.1165421412783 19.8080344201821 0.304333333333333 0.357666666666667 0.00973522034885071 0.0104519315770562 3.90400632206544 3.83432901240385 Q8TF01 PNISR Q8TF01.S650.p_PNISR Q8TF01_S650s_1_1_650_650 Q8TF01 Q8TF01 Arginine/serine-rich protein PNISR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4891.4891.3 8.79 8.79 1.952 2 1 1 0 484.9117 1371.7745 S650s N652n TMT10 647 (R) GNLsGnSHK (H) GN(0.0)LS(0.99)GN(0.99)S(0.0)HK K:TMT10,s:Phosphorylated S,n:Deamidated PNISR 92575.2 1 6 613.1 261.5 HUMAN 1 20.1165 19.808 DDRMSVNSGSSSSKT-p Q8WVM7;S1065-p DDRMSVNSGSSSSKT 0.53618762558018 0.0945894044974854 0.105 0.186333333333333 5.00931587063772 13.543587865688 0.105 0.186333333333333 0.315550165969561 0.0442222884899393 1.10576501939697 2.60799240140385 Q8WVM7 STAG1 Q8WVM7.S1065.p_STAG1 Q8WVM7_S1065s _1_1_1065_1065 Q8WVM7 Q8WVM7|Q8WVM7-2|Q68DW7 Cohesin subunit SA-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11350.11350.4 18 18 1.139 8 1 1 0 688.8278 2672.3198 S1065s TMT10 1050 (R) NSLVTGGEDDRMSVNsGSSSSK (T) NS(0.0)LVT(0.0)GGEDDRMS(0.0)VNS(0.99)GS(0.0)S(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S STAG1 145394.7 2 3 2727.1 72.59 HUMAN 1 5.0093 13.5436 DDRQIVDTPPHVAAG-p Q96I25;T71-p DDRQIVDTPPHVAAG 0.862721178211236 0.029722840271093 0.026 0.317 1.2526765352906 20.6647369529988 0.026 0.317 0.749432195644135 0.00858077085856972 0.336111549490048 4.01916326386207 Q96I25 RBM17 Q96I25.T71.p_RBM17 Q96I25_T71t_1_1_71_71 Q96I25 Q96I25 Splicing factor 45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37170.37170.5 28.68 24.89 5.87 5 1 1 0 1052.9258 5197.6484 Q67q T71t Hydrogen 67 (R) qIVDtPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEK (V) Q(1.0)IVDT(0.99)PPHVAAGLKDPVPS(0.0)GFS(0.0)AGEVLIPLADEY(0.0)DPMFPNDY(0.0)EK K:TMT10-Lys-Only,q:Pyroglutamic acid,t:Phosphorylated T RBM17 45188.9 16 3 851.1 212.17 HUMAN 1 1.2527 20.6647 DDRRDRYSAGKRGGF-p P17844;S498-p DDRRDRYSAGKRGGF 0.182183235857593 0.0689677810292721 -0.388666666666667 -0.554 14.5483567601834 15.4431001333547 -0.388666666666667 -0.554 0.0350884613032443 0.0285555143143796 -2.79416646581935 -2.95997357650108 P17844 DDX5 P17844.S498.p_DDX5 P17844_S498s _1_1_498_498 P17844 P17844|J3KTA4|P17844-2 Probable ATP-dependent RNA helicase DDX5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4495.4495.2 9.84 9.84 9.844 2 1 1 0 667.8468 1254.7207 S498s TMT10 495 (R) DRYsAGK (R) DRY(0.0)S(0.99)AGK K:TMT10,s:Phosphorylated S DDX5 69660.3 2 13 2075.1 99 HUMAN 1 -14.5484 -15.4431 DDRRNPQSPNLQNPT-p Q8NEV8;S643-p DDRRNPQSPNLQNPT 0.138801343205083 0.0639347300309162 -0.25 -0.511333333333333 17.5637868185813 15.8993182858878 -0.25 -0.511333333333334 0.0175235187718325 0.0257079929068506 -3.3745159072468 -3.04674606928276 Q8NEV8 EXPH5 Q8NEV8.S643.p_EXPH5 Q8NEV8_S643s _1_1_643_643 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18071.18071.3 12.32 12.32 5.694 3 1 1 0 773.0838 2237.2654 S643s TMT10 640 (R) NPQsPNLQNPTVTLQK (I) NPQS(0.99)PNLQNPT(0.0)VT(0.0)LQK K:TMT10,s:Phosphorylated S EXPH5 223884.5 1 7 129.1 537.25 HUMAN 1 -17.5638 -15.8993 DDRYSLVSEQLEPAA-p Q9Y446-2;S214-p DDRYSLVSEQLEPAA 0.129386523247171 0.0907547112187168 0.293 0.193666666666667 18.3963320582091 13.786440539948 0.293 0.193666666666667 0.0144666106843022 0.0418172959103902 3.54292404639043 2.65223001705513 Q9Y446 PKP3 Q9Y446.2.S214.p_PKP3 Q9Y446-2_S211sS214s_2_2_211_214 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25650.25650.4 11.96 11.96 2.303 7 2 2 0 796.8776 3024.5476 S211s S214s TMT10 201 (R) LGPGGLDDRYsLVsEQLEPAATSTYR (A) LGPGGLDDRY(0.0)S(0.99)LVS(0.99)EQLEPAAT(0.0)S(0.0)T(0.0)Y(0.0)R s:Phosphorylated S PKP3 89109.7 2 18 454.1 307.47 HUMAN 1 18.3963 13.7864 DDSAKFDSNEEDSAS-p Q02880;S1466-p DDSAKFDSNEEDSAS 0.903287472016556 0.0286113715981068 -0.019 0.295333333333333 0.867266295381818 20.8985918896593 -0.019 0.295333333333333 0.818980140136848 0.00813094102433787 -0.240243959335854 4.07047778860986 Q02880 TOP2B Q02880.S1466.p_TOP2B Q02880_S1466s _1_1_1466_1466 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25440.26069.4 22.44 22.44 3.759 7 1 1 0 891.4252 3482.7054 S1466s TMT10 1457 (K) SEDDSAKFDsNEEDSASVFSPSFGLK (Q) S(0.0)EDDS(0.0)AKFDS(0.99)NEEDS(0.0)AS(0.0)VFS(0.0)PS(0.0)FGLK K:TMT10,s:Phosphorylated S TOP2B 184233.7 20 39 71.1 658.36 HUMAN 1 -0.8673 20.8986 DDSCSINSDPEAKCF-p Q92870-4;S413-p DDSCSINSDPEAKCF 0.6754561512583 0.0878398009890487 0.0586666666666667 0.21 3.19341030501903 13.9842419230187 0.0586666666666667 0.21 0.47935688497463 0.039955429889313 0.759429649715214 2.68841521145962 Q92870 APBB2 Q92870.4.S413.p_APBB2 Q92870-4_S413s _1_1_413_413 Q92870-4 Q92870-4|G5E9Y1|Q92870-2 Isoform 4 of Amyloid-beta A4 precursor protein-binding family B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8530.8530.3 22.94 22.94 1.457 3 1 1 0 908.0624 2642.2041 S413s TMT10 399 (R) NAPHPDDDDSCSINsDPEAK (C) NAPHPDDDDS(0.0)CS(0.0)INS(0.99)DPEAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S APBB2 84356.2 4 15 667.1 249.66 HUMAN 1 3.1934 13.9842 DDSDSNLSVVKKLPV-p P49792;S730-p DDSDSNLSVVKKLPV 0.82783001131982 0.138881378491189 0.0343333333333333 0.156333333333333 1.57798479579688 11.2939138200228 0.0343333333333333 0.156333333333333 0.695346896159366 0.0742349837837957 0.413173803442162 2.20665718131284 P49792 RANBP2 P49792.S730.p_RANBP2 P49792_S730s _1_1_730_730 P49792 P49792|A0A286YES2|F8VYC4|P0DJD1|A0A1W2PNU4|P0DJD0|J3KNE0|A6NKT7|Q7Z3J3 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21623.21623.2 16.13 13.7 2.261 3 1 1 0 972.0129 1863.0475 S730s TMT10 721 (K) IIDDSDSNLsVVK (K) IIDDS(0.0)DS(0.0)NLS(0.99)VVK K:TMT10,s:Phosphorylated S RANBP2 362585.9 3 7 9.1 1298.62 HUMAN 1 1.578 11.2939 DDSEGEESEEEEEGE-p A0A0A0MT49;S1609-p DDSEGEESEEEEEGE 0.916145150674614 0.0320849526179946 -0.0168333333333333 0.298166666666667 0.742529170020906 20.1553339004749 -0.0168333333333333 0.298166666666667 0.842843773852525 0.0096486512681762 -0.207986192442856 3.90867245691116 A0A0A0MT49 NotFound A0A0A0MT49.S1609.p_NotFound A0A0A0MT49_S1604sS1609s_2_2_1604_1609 A0A0A0MT49 A0A0A0MT49|Q9HBD4|P51532|P51532-4|P51532-3 Transcription activator BRG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9396.9396.4 14.72 14.72 12.076 5 2 2 0 1073.7034 4131.8576 S1604s S1609s TMT10 1596 (R) QKIEKEDDsEGEEsEEEEEGEEEGSESESR (S) QKIEKEDDS(0.99)EGEES(0.99)EEEEEGEEEGS(0.0)ES(0.0)ES(0.0)R K:TMT10,s:Phosphorylated S SMARCA4 189484.7 2 17 392.1 331.85 HUMAN 2 -0.7425 20.1553 DDSHDGESESNAKVA-p P38398;S403-p DDSHDGESESNAKVA 0.377007280567508 0.716003479521878 0.137333333333333 -0.0916666666666667 7.82969866847549 1.995051897294 0.137333333333333 -0.0916666666666667 0.164827675183556 0.631676630837084 1.60560333656025 -0.507647082148347 P38398 BRCA1 P38398.S403.p_BRCA1 P38398_S395sS398sS403s_3_3_395_403 P38398 P38398-7|P38398-4|P38398-8|Q5YLB2 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16061.16061.3 8.47 8.47 2.657 5 3 3 0 930.6984 2550.1844 S395s S398s S403s TMT10 389 (R) SDELLGsDDsHDGEsESNAK (V) S(0.0)DELLGS(0.99)DDS(0.99)HDGES(0.99)ES(0.0)NAK K:TMT10,s:Phosphorylated S BRCA1 210227.6 1 29 106.1 588.91 HUMAN 1 7.8297 -1.9951 DDSMRVLYYMEKELA-p Q86X29;Y406-p DDSMRVLYYMEKELA 0.247048592039774 0.0876311942740425 -0.183 -0.261 11.6028151885838 13.9963662121013 -0.183 -0.261 0.0691382656786528 0.0398440410430152 -2.26207664143629 -2.69063779566467 Q86X29 LSR Q86X29.Y406.p_LSR Q86X29_Y406y _1_1_406_406 Q86X29 Q86X29|Q86X29-4|Q86X29-3 Lipolysis-stimulated lipoprotein receptor GG20160819_MSz_CCLE_T4D7_pY_Injection_01.28643.28643.2 9.65 9.65 2.693 2 1 1 0 742.386 1403.8009 Y406y TMT10 404 (R) VLyYMEK (E) VLY(0.99)Y(0.0)MEK K:TMT10,y:Phosphorylated Y LSR 72578.7 3 1 113.1 26.21 HUMAN 1 -11.6028 -13.9964 DDSNESKSIVWYPPW-p Q9UH62;S72-p DDSNESKSIVWYPPW 0.133015503975615 0.0199274763775543 -0.355 0.350666666666667 18.0563938379398 23.3156700487469 -0.355 0.350666666666667 0.0156444614053379 0.00466050518118242 -3.47368730083244 4.62417936631084 Q9UH62 ARMCX3 Q9UH62.S72.p_ARMCX3 Q9UH62_S72s _1_1_72_72 Q9UH62 Q9UH62 Armadillo repeat-containing X-linked protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30780.30780.2 15.09 15.09 4.888 2 1 1 0 792.403 1503.831 S72s TMT10 72 (K) sIVWYPPWAR (I) S(0.99)IVWY(0.0)PPWAR s:Phosphorylated S ARMCX3 42842.2 3 3 2535.1 79.58 HUMAN 1 -18.0564 23.3157 DDSNRPASLTKDRLL-p Q9NYF8;S564-p DDSNRPASLTKDRLL 0.248798577375663 0.269407050039044 -0.253333333333333 -0.136333333333333 11.5281648004968 7.50105714755215 -0.253333333333333 -0.136333333333333 0.0703369480147411 0.177784659888848 -2.24891267430875 -1.54800763078564 Q9NYF8 BCLAF1 Q9NYF8.S564.p_BCLAF1 Q9NYF8_S564s _1_1_564_564 Q9NYF8 Q9NYF8-4|A0A1W2PQ43|E9PJA7|Q9NYF8-2|E9PK91 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18818.18818.3 15.53 15.53 1.637 3 1 1 0 784.08 2270.2579 S564s TMT10 551 (K) MAPVPLDDSNRPAsLTK (D) MAPVPLDDS(0.0)NRPAS(0.99)LT(0.0)K K:TMT10,s:Phosphorylated S BCLAF1 106234.3 3 31 10.1 1293.04 HUMAN 1 -11.5282 -7.5011 DDSPPARSPNLPSMN-p O00512;S1044-p DDSPPARSPNLPSMN 0.868540802093725 0.84070341577723 -0.0273333333333333 0.0273333333333334 1.1953229775252 1.05915586140104 -0.0273333333333333 0.0273333333333334 0.759394945638871 0.783581932860486 -0.322180160770365 0.288623270023432 O00512 BCL9 O00512.S1044.p_BCL9 O00512_S1044s _1_1_1044_1044 O00512 O00512 B-cell CLL/lymphoma 9 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19762.19762.4 27.61 24.87 2.201 7 1 1 0 970.1956 3797.7843 S1044s TMT10 1031 (K) TVASSDDDSPPARsPNLPSMNNMPGMGINTQNPR (I) T(0.0)VAS(0.0)S(0.0)DDDS(0.0)PPARS(0.99)PNLPS(0.0)MNNMPGMGINT(0.0)QNPR s:Phosphorylated S BCL9 149515.8 2 14 313.1 369.9 HUMAN 1 -1.1953 1.0592 DDSPTPGSPGSPPSG-p Q9BZE0;S51-p DDSPTPGSPGSPPSG 0.104661463599437 0.538305010603522 -0.323333333333333 0.0763333333333334 20.6719875172845 3.61860774869837 -0.323333333333333 0.0763333333333334 0.00856645717793326 0.434649540793605 -4.02467339494272 0.843352839081895 Q9BZE0 GLIS2 Q9BZE0.S51.p_GLIS2 Q9BZE0_S51sS54s_2_2_51_54 Q9BZE0 Q9BZE0 Zinc finger protein GLIS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32686.32686.4 17.98 16.36 1.869 6 2 2 0 797.3959 3026.6087 S51s S54s TMT10 39 (R) ELGLVDDSPTPGsPGsPPSGFLLNSK (F) ELGLVDDS(0.0)PT(0.0)PGS(0.99)PGS(0.99)PPS(0.0)GFLLNS(0.0)K K:TMT10,s:Phosphorylated S GLIS2 56486.5 1 6 1864.1 110.54 HUMAN 1 -20.672 3.6186 DDSSAYRSVDEVNYW-p P12694;S347-p DDSSAYRSVDEVNYW 0.214320922260611 0.00455152323017347 0.306666666666667 0.680666666666667 12.8945368533232 34.3098810812223 0.306666666666667 0.680666666666667 0.0513506936741261 0.000370690871923488 2.49208028414511 7.84358104514575 P12694 BCKDHA P12694.S347.p_BCKDHA P12694_S347s _1_1_347_347 P12694 F5H5P2|P12694-2 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17597.17597.2 14.88 14.88 8.877 2 1 1 0 782.3493 1483.7266 S347s Hydrogen 347 (R) sVDEVNYWDK (Q) S(0.99)VDEVNY(0.0)WDK K:TMT10-Lys-Only,s:Phosphorylated S BCKDHA 50755.3 6 3 2643.1 75.38 HUMAN 1 12.8945 34.3099 DDSSEEQSAEDSYEA-p A0A0A0MR66;S130-p DDSSEEQSAEDSYEA 0.41147791714667 0.010242343797924 0.123666666666667 0.534666666666667 7.11445509717622 27.9341939203418 0.123666666666667 0.534666666666667 0.194336550771086 0.00160909100824684 1.4810334770763 5.81900544843232 A0A0A0MR66 RBM10 A0A0A0MR66.S130.p_RBM10 A0A0A0MR66_S125sS126sS130s_3_3_125_130 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9473.9473.3 17.08 17.08 3.485 11 3 3 0 1422.8589 4026.6707 S125s S126s S130s Hydrogen 112 (R) EYGSQEGKHDYDDssEEQsAEDSYEASPGSETQR (R) EY(0.0)GS(0.0)QEGKHDY(0.0)DDS(0.99)S(0.99)EEQS(0.99)AEDS(0.0)Y(0.0)EAS(0.0)PGS(0.0)ET(0.0)QR K:TMT10-Lys-Only,s:Phosphorylated S RBM10 110706.4 7 20 270.1 394.36 HUMAN 1 7.1145 27.9342 DDSTLSESANQVFLG-p P23443-2;S380-p DDSTLSESANQVFLG 0.172013774159731 0.785801812629155 -0.232 -0.0303333333333333 15.217706424277 1.45236433224206 -0.232 -0.0303333333333333 0.0300766427687745 0.71575364239104 -2.91938280451646 -0.383752320844172 P23443 RPS6KB1 P23443.2.S380.p_RPS6KB1 P23443-2_S380s_1_1_380_380 P23443-2 P23443|P23443-2|P23443-5|P23443-3|P23443-4 Isoform Alpha II of Ribosomal protein S6 kinase beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37695.37695.3 22.83 22.83 2.118 10 1 1 0 1423.0428 4186.1484 S380s N382n TMT10 366 (R) QTPVDSPDDSTLSEsAnQVFLGFTYVAPSVLESVK (E) QT(0.0)PVDS(0.0)PDDS(0.0)T(0.0)LS(0.0)ES(0.99)AN(1.0)QVFLGFT(0.0)Y(0.0)VAPS(0.0)VLES(0.0)VK K:TMT10,s:Phosphorylated S,n:Deamidated RPS6KB1 56530.6 4 4 1663.1 122.57 HUMAN 1 -15.2177 -1.4524 DDTESLHSQGEEEFD-p Q12888-2;S1224-p DDTESLHSQGEEEFD 0.397817398122165 0.0277238968700976 0.113333333333333 0.3535 7.38963959646608 21.1044752736542 0.113333333333333 0.3535 0.182404706637323 0.00775447629380857 1.52905981667494 4.11596880731345 Q12888 TP53BP1 Q12888.2.S1224.p_TP53BP1 Q12888-2_S1221sS1224s_2_2_1221_1224 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13407.13407.4 19.68 18.47 1.176 5 2 2 0 1178.0378 4549.1843 S1221s S1224s TMT10 1206 (R) GSGEKPVSAPGDDTEsLHsQGEEEFDMPQPPHGHVLHR (H) GS(0.0)GEKPVS(0.0)APGDDT(0.0)ES(0.99)LHS(0.99)QGEEEFDMPQPPHGHVLHR K:TMT10,s:Phosphorylated S TP53BP1 216167.2 11 102 3.1 2297.07 HUMAN 2 7.3896 21.1045 DDTMSVISGISSRGS-p Q8N3U4-2;S1061-p DDTMSVISGISSRGS 0.218866704322989 0.66329592075741 0.194666666666667 0.046 12.7130675674035 2.44192447997702 0.194666666666667 0.046 0.0535418340011174 0.569911672560551 2.45948949879275 0.604512118993196 Q8N3U4 STAG2 Q8N3U4.2.S1061.p_STAG2 Q8N3U4-2_S1058sS1061s_2_2_1058_1061 Q8N3U4-2 Q8N3U4|Q8N3U4-2 Isoform 2 of Cohesin subunit SA-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27393.27393.3 12.94 12.94 2.3 6 2 2 0 828.7001 2324.1601 S1058s S1061s TMT10 1046 (R) NSLLAGGDDDTMsVIsGISSR (G) NS(0.0)LLAGGDDDT(0.0)MS(0.99)VIS(0.99)GIS(0.0)S(0.0)R s:Phosphorylated S STAG2 146947.1 3 6 3646.1 46.14 HUMAN 2 12.7131 2.4419 DDVIEKDSPESPFEV-p O95197;S243-p DDVIEKDSPESPFEV 0.58471981560589 0.321476803921826 -0.0763333333333334 -0.115 4.2849830182273 6.51624403929366 -0.0763333333333334 -0.115 0.37282214274838 0.223036322700935 -0.971227267083476 -1.37568507222564 O95197 RTN3 O95197.S243.p_RTN3 O95197_S243s _1_1_243_243 O95197 O95197|O95197-2|O95197-7 Reticulon-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30012.30012.4 19.18 17.14 1.201 3 1 1 0 797.167 3105.681 S243s TMT10 233 (K) VSGDDVIEKDsPESPFEVIIDK (A) VS(0.0)GDDVIEKDS(0.99)PES(0.0)PFEVIIDK K:TMT10,s:Phosphorylated S RTN3 113236.6 1 3 1374.1 148.87 HUMAN 1 -4.285 -6.5162 DDVLIVDSDEEDSSN-p Q9UBT2;S592-p DDVLIVDSDEEDSSN 0.974313561866913 0.0154604915090575 -0.00666666666666668 0.425 0.221520885813395 25.0410687739974 -0.00666666666666669 0.425 0.95027195308749 0.00313251473540717 -0.0653102822679591 5.04787188507803 Q9UBT2 UBA2 Q9UBT2.S592.p_UBA2 Q9UBT2_S592s _1_1_592_592 Q9UBT2 Q9UBT2|Q9UBT2-2|U3KQ93 SUMO-activating enzyme subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18590.18590.4 30.64 28.04 1.921 11 1 1 0 1242.0347 4885.1212 S592s TMT10 565 (K) SITNGSDDGAQPSTSTAQEQDDVLIVDsDEEDSSNNADVSEEER (S) S(0.0)IT(0.0)NGS(0.0)DDGAQPS(0.0)T(0.0)S(0.0)T(0.0)AQEQDDVLIVDS(0.99)DEEDS(0.0)S(0.0)NNADVS(0.0)EEER s:Phosphorylated S UBA2 71792.9 22 3 1633.1 125.05 HUMAN 1 -0.2215 25.0411 DDVPIPNSPFKVAVT-p O75369-8;S1316-p DDVPIPNSPFKVAVT 0.20509421231456 0.0535838480226852 -0.216 -0.245666666666667 13.3069042170594 16.9433399055537 -0.216 -0.245666666666667 0.0466992147880023 0.0202146399070141 -2.56651930409048 -3.24901801502374 O75369 FLNB O75369.8.S1316.p_FLNB O75369-8_S1316s _1_1_1316_1316 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|O75369-4|O75369-5 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27083.27083.3 27.16 27.16 10.98 3 1 1 0 922.1507 2684.47 S1316s TMT10 1300 (K) GLHVVEVTYDDVPIPNsPFK (V) GLHVVEVT(0.0)Y(0.0)DDVPIPNS(0.99)PFK K:TMT10,s:Phosphorylated S FLNB 283797.6 8 22 67.1 680.07 HUMAN 1 -13.3069 -16.9433 DDVPLSLSPSKRACA-p Q9UFC0;S243-p DDVPLSLSPSKRACA 0.948382615574022 0.00410027641213345 0.015 -1.029 0.457381682635032 35.1464854125814 0.015 -1.029 0.900040043000862 0.000305739435047156 0.131620293906098 -8.14829667433515 Q9UFC0 LRWD1 Q9UFC0.S243.p_LRWD1 Q9UFC0_S243s _1_1_243_243 Q9UFC0 Q9UFC0 Leucine-rich repeat and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22059.22265.4 23.61 19.77 2.914 3 1 1 0 669.3942 2594.5848 S243s TMT10 229 (R) LAALKRPDDVPLSLsPSK (R) LAALKRPDDVPLS(0.0)LS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S LRWD1 72115.1 15 2 1514.1 134.66 HUMAN 1 0.4574 -35.1465 DDWTGMESEEENKKD-p O95149;S75-p DDWTGMESEEENKKD 0.732092052632994 0.277369724582854 -0.0473333333333333 0.135333333333333 2.56797596425828 7.33801018858071 -0.0473333333333333 0.135333333333333 0.553608058942219 0.184586094544277 -0.631209233255714 1.51961961181176 O95149 SNUPN O95149.S75.p_SNUPN O95149_S75s _1_1_75_75 O95149 O95149 Snurportin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23711.23711.4 24.85 21.55 1.162 3 1 1 0 1075.2574 4218.04 S75s TMT10 65 (R) LAEDDWTGMEsEEENKKDDEEMDIDTVK (K) LAEDDWT(0.0)GMES(0.99)EEENKKDDEEMDIDT(0.0)VK K:TMT10,s:Phosphorylated S SNUPN 41598.2 8 2 2712.1 73.08 HUMAN 1 -2.568 7.338 DDYFADVSPLRATSP-p Q1ED39;S42-p DDYFADVSPLRATSP 0.537405562075393 0.570145030030526 0.083 0.062 4.98535969606837 3.2887550927964 0.083 0.062 0.31729558589746 0.468947786987528 1.10137449862689 0.778360129028718 Q1ED39 KNOP1 Q1ED39.S42.p_KNOP1 Q1ED39_S42s _1_1_42_42 Q1ED39 Q1ED39 Lysine-rich nucleolar protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25489.25489.4 22.22 22.22 1.698 7 1 1 0 775.1387 3017.562 S42s TMT10 29 (R) YSVLNNDDYFADVsPLRATSPSK (S) Y(0.0)S(0.0)VLNNDDY(0.0)FADVS(0.99)PLRAT(0.0)S(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S KNOP1 51759.2 11 1 660.1 251.7 HUMAN 1 4.9854 3.2888 DDYRDYDSPERERER-p P52756;S59-p DDYRDYDSPERERER 0.590692831559631 0.234658448563235 -0.0923333333333333 0.291333333333333 4.21428342474504 8.29027730834925 -0.0923333333333334 0.291333333333333 0.37894105293587 0.148242342552328 -0.957874801112287 1.68492751541393 P52756 RBM5 P52756.S59.p_RBM5 P52756_S59s _1_1_59_59 P52756 P52756|P52756-5|P52756-2|P52756-4|P52756-3 RNA-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5447.5447.5 15.87 10.71 6.354 4 1 1 0 535.2396 2592.2025 S59s TMT10 47 (R) RGDRYDDYRDYDsPERER (E) RGDRY(0.0)DDY(0.0)RDY(0.0)DS(0.99)PERER s:Phosphorylated S RBM5 92665.7 11 2 560.1 271.79 HUMAN 1 -4.2143 8.2903 DDYYRERSRERERHR-p Q16630-2;S562-p DDYYRERSRERERHR 0.999491325040821 0.0807578568881726 -0.000666666666666612 0.886666666666667 0.00510211358689276 14.4935177252034 -0.000666666666666627 0.886666666666667 0.998825884744522 0.0355343378751738 -0.00154072632855109 2.78224785737095 Q16630 CPSF6 Q16630.2.S562.p_CPSF6 Q16630-2_S562s _1_1_562_562 Q16630-2 Q16630-2|Q16630-3|F8WJN3 Isoform 2 of Cleavage and polyadenylation specificity factor subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.2692.2692.4 14.52 14.52 14.518 3 1 1 0 437.6877 1667.7633 S562s Hydrogen 552 (R) DRHDDYYRERsR (E) DRHDDY(0.0)Y(0.0)RERS(0.99)R s:Phosphorylated S CPSF6 63640.9 7 7 1308.1 155.75 HUMAN 1 -0.0051 14.4935 DEAGQRSTM______-p Q53TN4;T285-p DEAGQRSTM______ 0.860564434518933 0.113209479996292 0.026 0.282666666666667 1.27379804736443 12.47863241882 0.026 0.282666666666667 0.745796249905369 0.0565114899898613 0.341214622348608 2.41626721996436 Q53TN4 CYBRD1 Q53TN4.T285.p_CYBRD1 Q53TN4_T285t_1_1_285_285 Q53TN4 Q53TN4|Q53TN4-3 Cytochrome b reductase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12248.12248.2 11.65 11.65 1.521 2 1 1 0 865.9025 1634.8369 T285t M286m TMT10 274 (R) NLALDEAGQRStm (-) NLALDEAGQRS(0.0)T(0.99)M(1.0) t:Phosphorylated T,m:Oxidized methionine CYBRD1 31754.8 6 2 5330.1 20.44 HUMAN 1 1.2738 12.4786 DEAIDTKSLLDASEE-p P18206-2;S721-p DEAIDTKSLLDASEE 0.051965926754337 0.0364204913303259 -0.835 0.473333333333333 28.005601574167 19.3598685248257 -0.835 0.473333333333333 0.00158285029894202 0.0115881243667475 -5.84753769660508 3.73954090412427 P18206 VCL P18206.2.S721.p_VCL P18206-2_S721s _1_1_721_721 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21015.21015.3 16.07 16.07 16.066 2 1 1 0 691.0606 1991.1992 S721s TMT10 721 (K) sLLDASEEAIKK (D) S(0.99)LLDAS(0.0)EEAIKK K:TMT10,s:Phosphorylated S VCL 117290.9 10 14 319.1 365.38 HUMAN 1 -28.0056 19.3599 DEAKILKSLHHPNIV-p Q96KB5-2;S91-p DEAKILKSLHHPNIV 0.887456189668158 0.491385309668295 -0.026 -0.15 1.01106712047202 4.12346490489133 -0.026 -0.15 0.792306626071757 0.386948804758562 -0.276652198822035 -0.940494734334493 Q96KB5 PBK Q96KB5.2.S91.p_PBK Q96KB5-2_S91s _1_1_91_91 Q96KB5-2 Q96KB5-2 Isoform 2 of Lymphokine-activated killer T-cell-originated protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9173.9173.3 11.25 11.25 11.25 2 1 1 0 534.6106 1521.8488 S91s TMT10 91 (K) sLHHPNIVGYR (A) S(0.99)LHHPNIVGY(0.0)R s:Phosphorylated S PBK 37553.1 1 7 2474.1 81.89 HUMAN 1 -1.0111 -4.1235 DEAPRKGSFSALVGR-p Q13619;S10-p DEAPRKGSFSALVGR 0.0428370985731628 0.889469027764128 -0.536 0.0350000000000001 30.4567848952593 0.713606341876965 -0.536 0.035 0.000900163730835852 0.848475615988242 -6.57231424940813 0.200392653651072 Q13619 CUL4A Q13619.S10.p_CUL4A Q13619_S10s _1_1_10_10 Q13619 Q13619|A0A087WWN2 Cullin-4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15828.15828.2 12.33 12.33 2.125 2 1 1 0 780.4399 1479.9048 S10s TMT10 8 (R) KGsFSALVGR (T) KGS(0.99)FS(0.0)ALVGR K:TMT10,s:Phosphorylated S CUL4A 88192.2 10 1 4252.1 34.65 HUMAN 1 -30.4568 0.7136 DEDAPLNSPGSEGST-p Q7Z4S6-5;S1108-p DEDAPLNSPGSEGST 0.474773316010134 0.454746932176607 -0.12 -0.073 5.95675668651556 4.56290824077001 -0.12 -0.073 0.253702257300862 0.349710905677548 -1.27685630225554 -1.02312105455628 Q7Z4S6 KIF21A Q7Z4S6.5.S1108.p_KIF21A Q7Z4S6-5_S1099sT1100tS1108s_3_3_1099_1108 Q7Z4S6-5 Q7Z4S6-5 Isoform 5 of Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.35754.36222.5 26.46 26.46 1.668 8 3 3 0 1179.7473 5653.8158 S1099s T1100t N1107n S1108s TMT10 1076 (K) EKAELNPELDALLGHALQENVEDstDEDAPLnsPGSEGSTLSSDLMK (L) EKAELN(0.0)PELDALLGHALQEN(0.0)VEDS(0.99)T(0.99)DEDAPLN(0.99)S(0.99)PGS(0.0)EGS(0.0)T(0.0)LS(0.0)S(0.0)DLMK K:TMT10,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated KIF21A 184163.5 3 26 390.1 332.37 HUMAN 1 -5.9568 -4.5629 DEDDADLSKYNLDAS-p O95218-2;S181-p DEDDADLSKYNLDAS 0.413287318312599 0.224256403304952 -0.130666666666667 0.188333333333333 7.08128515478484 8.55048330662765 -0.130666666666667 0.188333333333333 0.195826510220771 0.139621297420181 -1.4752343830802 1.72995909223524 O95218 ZRANB2 O95218.2.S181.p_ZRANB2 O95218-2_S181s_1_1_181_181 O95218-2 O95218|O95218-2 Isoform 2 of Zinc finger Ran-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19730.19730.4 16.74 16.74 3.685 5 1 1 0 1098.7671 4311.0606 S181s N184n TMT10 167 (K) YKLDEDEDEDDADLsKYnLDASEEEDSNK (K) Y(0.0)KLDEDEDEDDADLS(0.99)KY(0.0)N(0.99)LDAS(0.0)EEEDS(0.0)N(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated ZRANB2 36774.1 1 3 212.1 438.05 HUMAN 1 -7.0813 8.5505 DEDDDRKSEDDKEEE-p Q8IX12;S697-p DEDDDRKSEDDKEEE 0.391048955822864 0.0170367523980032 -0.248 0.821 7.53249144592857 24.3990931161123 -0.248 0.821 0.176502497661893 0.00363153879822599 -1.55393807275159 4.8872681786378 Q8IX12 CCAR1 Q8IX12.S697.p_CCAR1 Q8IX12_S697s _1_1_697_697 Q8IX12 Q8IX12|Q8IX12-2 Cell division cycle and apoptosis regulator protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3815.3815.3 11.93 11.93 99 1 1 1 0 601.9401 1723.8387 S697s TMT10 697 (K) sEDDKEEEER (K) S(1.0)EDDKEEEER K:TMT10,s:Phosphorylated S CCAR1 133503.3 3 5 1111.1 176.02 HUMAN 1 -7.5325 24.3991 DEDDDWSSDEF____-p H8Y6P7;S762-p DEDDDWSSDEF____ 0.880959558381171 0.0533844301144045 0.0233333333333333 0.248 1.08107291677411 16.9700855563917 0.0233333333333333 0.248 0.77963747868054 0.0200905323369495 0.294092879330645 3.25427094899053 H8Y6P7 GCOM1 H8Y6P7.S762.p_GCOM1 H8Y6P7_S761sS762s_2_2_761_762 H8Y6P7 H8Y6P7|P0CAP1-11|Q9BZD3|P0CAP2|P0CAP2-2 GRINL1A combined protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17560.17560.2 8.77 8.77 8.769 3 2 2 0 1226.4658 2291.989 S761s S762s TMT10 750 (R) YREVRDEDDDWssDEF (-) Y(0.0)REVRDEDDDWS(0.99)S(0.99)DEF s:Phosphorylated S GCOM1 88318.6 2 6 2612.1 76.74 HUMAN 1 1.0811 16.9701 DEDDSDDSEAEKQSQ-p Q9Y2W2;S364-p DEDDSDDSEAEKQSQ 0.871044768133441 0.044246843681853 0.037 0.352333333333333 1.17359636856327 18.1321894032124 0.037 0.352333333333333 0.763203517217965 0.0153737940779804 0.316873763841752 3.48618691178376 Q9Y2W2 WBP11 Q9Y2W2.S364.p_WBP11 Q9Y2W2_S361sS364s_2_2_361_364 Q9Y2W2 Q9Y2W2 WW domain-binding protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19152.19152.5 24.38 24.38 5.478 4 2 2 0 990.8184 4790.1473 S361s S364s TMT10 337 (R) MAGQEIPEEGREVEEFSEDDDEDDsDDsEAEKQSQK (Q) MAGQEIPEEGREVEEFS(0.0)EDDDEDDS(0.99)DDS(0.99)EAEKQS(0.0)QK K:TMT10,s:Phosphorylated S WBP11 69996.4 9 4 1858.1 110.79 HUMAN 2 1.1736 18.1322 DEDEDESSEEDSEDE-p Q5SSJ5;S442-p DEDEDESSEEDSEDE 0.674594569293558 0.00463734855393385 -0.199666666666667 0.758 3.20277484238453 34.1447717467511 -0.199666666666667 0.758 0.478324378360612 0.000385055051582509 -0.761305645679402 7.78462043124103 Q5SSJ5 HP1BP3 Q5SSJ5.S442.p_HP1BP3 Q5SSJ5_S441sS442sS446s_3_3_441_446 Q5SSJ5 Q5SSJ5|Q5SSJ5-2|Q5SSJ5-3 Heterochromatin protein 1-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10530.10949.5 19.75 19.75 12.515 4 3 3 0 861.9416 4065.7783 S441s S442s S446s TMT10 426 (K) KEPDDSRDEDEDEDEssEEDsEDEEPPPK (R) KEPDDS(0.0)RDEDEDEDES(0.99)S(0.99)EEDS(0.99)EDEEPPPK K:TMT10,s:Phosphorylated S HP1BP3 61491.1 4 9 1424.1 144.01 HUMAN 1 -3.2028 34.1448 DEDEDVASPDGLGRL-p O95365;S549-p DEDEDVASPDGLGRL 0.544047599257806 0.82800363908916 0.0826666666666667 0.047 4.88181654304809 1.14612867678308 0.0826666666666667 0.047 0.324951350094131 0.768045824281422 1.0823552070147 0.310110837429147 O95365 ZBTB7A O95365.S549.p_ZBTB7A O95365_S549s _1_1_549_549 O95365 O95365 Zinc finger and BTB domain-containing protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22613.22613.4 20.18 18.46 4.527 4 1 1 0 1260.5901 4959.3305 S549s TMT10 537 (K) HFKDEDEDEDVAsPDGLGRLNVAGAGGGGDSGGGPGAATDGNFTAGLA (-) HFKDEDEDEDVAS(0.99)PDGLGRLNVAGAGGGGDS(0.0)GGGPGAAT(0.0)DGNFT(0.0)AGLA K:TMT10,s:Phosphorylated S ZBTB7A 62236.8 3 7 749.1 232.5 HUMAN 1 4.8818 1.1461 DEDEEGATALNNHSS-p Q16626;T123-p DEDEEGATALNNHSS 0.394026110561011 0.0456921667392721 0.237333333333333 -0.284 7.46287291224589 17.9317346827174 0.237333333333333 -0.284 0.179354678072025 0.0161000243077466 1.54181781168219 -3.44565548762835 Q16626 MEA1 Q16626.T123.p_MEA1 Q16626_T123t _1_1_123_123 Q16626 Q16626 Male-enhanced antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30181.30181.5 24.15 24.15 1.106 4 1 1 0 1045.7156 5144.5774 T123t TMT10 100 (R) IQALGLHLPDPPLESEDEDEEGAtALNNHSSIPMDPEHVELVK (R) IQALGLHLPDPPLES(0.0)EDEDEEGAT(0.99)ALNNHS(0.0)S(0.0)IPMDPEHVELVK K:TMT10,t:Phosphorylated T MEA1 19904.3 1 2 4201.1 35.54 HUMAN 1 7.4629 -17.9317 DEDEGIPSENEEEKK-p Q12802-2;S2349-p DEDEGIPSENEEEKK 0.424064582948113 0.057851122984366 -0.111 0.218333333333333 6.86771116312311 16.4891480508745 -0.111 0.218333333333333 0.205697438558012 0.0224432214599134 -1.43783629991686 3.16036617200905 Q12802 AKAP13 Q12802.2.S2349.p_AKAP13 Q12802-2_S2349s _1_1_2349_2349 Q12802-2 Q12802-2 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36993.36993.4 23.85 20.47 11.28 4 1 1 0 1017.7433 3987.9824 S2349s TMT10 2326 (R) NSWIQIIQDTINTLNRDEDEGIPsENEEEK (K) NS(0.0)WIQIIQDT(0.0)INT(0.0)LNRDEDEGIPS(0.99)ENEEEK K:TMT10,s:Phosphorylated S AKAP13 310921 4 20 66.1 683.25 HUMAN 1 -6.8677 16.4891 DEDEGSGSDEDENDE-p A0A0U1RRH6;S246-p DEDEGSGSDEDENDE 0.513311363016096 0.0390921366602911 -0.15 0.417666666666667 5.35244570456295 18.903051233584 -0.15 0.417666666666667 0.291578454416308 0.0128734478086014 -1.16827135825599 3.64421376113971 A0A0U1RRH6 NotFound A0A0U1RRH6.S246.p_NotFound A0A0U1RRH6_S232sS244sS246s_3_3_232_246 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7777.7777.5 23.93 23.93 2.124 8 3 3 0 1124.2186 5376.1597 S232s S244s S246s N251n TMT10 225 (R) SASQKEGsDGDNEDDEDEGsGsDEDEnDEGNDEDHSSPASEGGCK (K) S(0.0)AS(0.0)QKEGS(0.99)DGDN(0.0)EDDEDEGS(0.99)GS(0.99)DEDEN(0.99)DEGN(0.0)DEDHS(0.0)S(0.0)PAS(0.0)EGGCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated PHF14 109152.4 1 27 126.1 543.2 HUMAN 1 -5.3524 18.9031 DEDFAHHSDNEQNRH-p Q641Q2;S238-p DEDFAHHSDNEQNRH 0.150283451076775 0.241465571012327 -0.410666666666667 0.357666666666667 16.5825068641512 8.12990398908106 -0.410666666666667 0.357666666666667 0.0219659157524108 0.153818864517278 -3.18085222772649 1.65715397342867 Q641Q2 FAM21A Q641Q2.S238.p_FAM21A Q641Q2_S230sS238s_2_2_230_238 Q641Q2 Q641Q2|Q641Q2-2|E7ESD2|F8W7U3|A0A087WYF6 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4879.4879.3 12.73 12.73 99 2 2 2 0 902.6718 2546.0501 S230s S238s TMT10 226 (K) EEEEsDEDFAHHsDNEQNR (H) EEEES(1.0)DEDFAHHS(1.0)DNEQNR s:Phosphorylated S WASHC2A 147352.2 1 68 12.1 1178.3 HUMAN 1 -16.5825 8.1299 DEDLAWDSDNDSSSS-p Q8N9M1;S280-p DEDLAWDSDNDSSSS 0.875972211552485 0.636151599809403 -0.0226666666666667 -0.0553333333333333 1.12790501081074 2.67395909244199 -0.0226666666666667 -0.0553333333333333 0.771275434194336 0.540261587969141 -0.305661331255995 -0.65328821984212 Q8N9M1 C19orf47 Q8N9M1.S280.p_C19orf47 Q8N9M1_S280s _1_1_280_280 Q8N9M1 Q8N9M1|Q8N9M1-2|Q8N9M1-3 Uncharacterized protein C19orf47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30978.31593.4 30.98 30.98 3.851 8 1 1 0 1045.5123 4099.0962 S280s TMT10 266 (R) LGATPETDEDLAWDsDNDSSSSVLQYAGVLKK (L) LGAT(0.0)PET(0.0)DEDLAWDS(0.99)DNDS(0.0)S(0.0)S(0.0)S(0.0)VLQY(0.0)AGVLKK K:TMT10,s:Phosphorylated S C19orf47 44916.7 7 3 1515.1 134.55 HUMAN 1 -1.1279 -2.674 DEDLMRQTEGRVPVF-p Q96G25-2;T93-p DEDLMRQTEGRVPVF 0.595235645467781 0.652610862271916 0.122 0.058 4.15713251889208 2.53100537638717 0.122 0.058 0.383960676433153 0.558340925822383 0.947048954354043 0.623351163618329 Q96G25 MED8 Q96G25.2.T93.p_MED8 Q96G25-2_T93t _1_1_93_93 Q96G25-2 Q96G25-2 Isoform 2 of Mediator of RNA polymerase II transcription subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27449.27449.3 8.79 8.79 1.45 2 1 1 0 1035.2009 3023.6145 T93t TMT10 73 (R) NQVIIPLVLSPDRDEDLMRQtEGR (V) NQVIIPLVLS(0.0)PDRDEDLMRQT(0.99)EGR t:Phosphorylated T MED8 32989.1 1 2 4398.1 32.04 HUMAN 1 4.1571 2.531 DEDSERCSDDGDNFF-p Q96LX8;S326-p DEDSERCSDDGDNFF 0.67713796093897 0.623299576849871 0.0616666666666667 0.0613333333333333 3.17015066055688 2.79142267821208 0.0616666666666667 0.0613333333333334 0.481931078724207 0.525844979895151 0.754764921416862 0.677628482057069 Q96LX8 ZNF597 Q96LX8.S326.p_ZNF597 Q96LX8_S326s _1_1_326_326 Q96LX8 Q96LX8 Zinc finger protein 597 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18055.18055.3 15.59 15.59 1.17 5 1 1 0 1007.0867 2939.279 S326s TMT10 317 (K) SHDEDSERCsDDGDNFFSFSK (F) S(0.0)HDEDS(0.0)ERCS(0.99)DDGDNFFS(0.0)FS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF597 49216.4 2 118 240.5 415.72 HUMAN 1 3.1702 2.7914 DEDTEDASETDLAKH-p Q9H7L9;S53-p DEDTEDASETDLAKH 0.986311520639536 0.0105407926544461 0.00333333333333332 0.4365 0.121740854129831 27.729203810924 0.00333333333333331 0.4365 0.972357379618504 0.00168686224833471 0.0362832898852003 5.76166213266914 Q9H7L9 SUDS3 Q9H7L9.S53.p_SUDS3 Q9H7L9_S45sS53s_2_2_45_53 Q9H7L9 Q9H7L9 Sin3 histone deacetylase corepressor complex component SDS3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21552.21552.5 14.18 14.18 2.174 6 2 2 0 1049.2703 5082.3762 S45s S53s TMT10 42 (R) GREsDEDTEDAsETDLAKHDEEDYVEMKEQMYQDK (L) GRES(0.99)DEDT(0.0)EDAS(0.99)ET(0.0)DLAKHDEEDY(0.0)VEMKEQMY(0.0)QDK K:TMT10,s:Phosphorylated S SUDS3 38249.6 7 4 1096.1 178.23 HUMAN 2 0.1217 27.7292 DEDTPPNSPNVDLGK-p P98174;S715-p DEDTPPNSPNVDLGK 0.150283451076775 0.00701753853914177 -0.238 -0.566333333333333 16.592709186272 30.8576353874481 -0.238 -0.566333333333333 0.0219143746127192 0.000820798324526808 -3.18284025141795 -6.68636557537206 P98174 FGD1 P98174.S715.p_FGD1 P98174_T711tS715s_2_2_711_715 P98174 P98174 FYVE, RhoGEF and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19166.19166.3 13.25 8.59 3.683 4 2 2 0 1048.4955 2983.5373 T711t S715s TMT10 700 (K) LLNSTNREDEDtPPNsPNVDLGK (R) LLNS(0.0)T(0.0)NREDEDT(0.99)PPNS(0.99)PNVDLGK K:TMT10,t:Phosphorylated T,s:Phosphorylated S FGD1 107757.1 1 11 1189.1 168.38 HUMAN 1 -16.5927 -30.8576 DEDYEEDTPKRRGKG-p J3KMZ8;T176-p DEDYEEDTPKRRGKG 0.87644931294694 0.0297597435259287 -0.0246666666666667 -0.425 1.12374558771733 20.6549680117428 -0.0246666666666667 -0.425 0.772014471351123 0.00860009401323603 -0.304637016033026 -4.01702785592024 J3KMZ8 DPF2 J3KMZ8.T176.p_DPF2 J3KMZ8_T176t _1_1_176_176 J3KMZ8 J3KMZ8|Q92785 Zinc finger protein ubi-d4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28295.28295.4 20.48 20.48 6.453 2 1 1 0 873.6576 3411.648 T176t TMT10 157 (R) ILEPDDFLDDLDDEDYEEDtPKRR (G) ILEPDDFLDDLDDEDY(0.0)EEDT(0.99)PKRR K:TMT10,t:Phosphorylated T DPF2 46920.6 8 3 1300.1 156.5 HUMAN 1 -1.1237 -20.655 DEDYGRDSGPPTKKI-p Q9H1E3;S30-p DEDYGRDSGPPTKKI 0.652911308934577 0.00985022343060253 -0.0696666666666667 0.514333333333333 3.47067729448289 28.2391060022226 -0.0696666666666667 0.514333333333333 0.449709715926771 0.00149999357829523 -0.814492954711387 5.90510667078854 Q9H1E3 NUCKS1 Q9H1E3.S30.p_NUCKS1 Q9H1E3_S30s _1_1_30_30 Q9H1E3 Q9H1E3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17975.17975.3 22.91 22.91 4.164 6 1 1 0 1153.5142 3378.565 S30s TMT10 10 (K) VVDYSQFQESDDADEDYGRDsGPPTK (K) VVDY(0.0)S(0.0)QFQES(0.0)DDADEDY(0.0)GRDS(0.99)GPPT(0.0)K K:TMT10,s:Phosphorylated S NUCKS1 27295.9 3 2 48.1 767.83 HUMAN 1 -3.4707 28.2391 DEEDDDVSHVDEEDC-p O75381;S335-p DEEDDDVSHVDEEDC 0.970869500201336 0.610017982783288 0.00633333333333333 0.069 0.252491857297525 2.91635591250397 0.00633333333333333 0.069 0.943519356574659 0.510933535373775 0.0741969364707771 0.703274289683179 O75381 PEX14 O75381.S335.p_PEX14 O75381_S335s _1_1_335_335 O75381 O75381|O75381-2 Peroxisomal membrane protein PEX14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13400.13400.5 23.95 23.95 99 1 1 1 0 1044.4622 5138.3053 S335s TMT10 311 (R) MEVQGEEEKREDKEDEEDEEDDDVsHVDEEDCLGVQR (E) MEVQGEEEKREDKEDEEDEEDDDVS(1.0)HVDEEDCLGVQR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PEX14 41292.9 4 6 1445.1 141.13 HUMAN 1 0.2525 2.9164 DEEDEDNTSEAENGF-p Q03701;T33-p DEEDEDNTSEAENGF 0.780823402104169 0.107288545373446 0.055 0.171666666666667 2.0652212417759 12.8047725223158 0.055 0.171666666666667 0.62155258331611 0.0524231058816276 0.523197790272628 2.47461336060636 Q03701 CEBPZ Q03701.T33.p_CEBPZ Q03701_T33tS34s_2_2_33_34 Q03701 Q03701 CCAAT/enhancer-binding protein zeta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28380.28380.4 23.79 20.53 6.705 3 2 2 0 1095.7191 4217.9221 N32n T33t S34s N38n TMT10 14 (K) RPWRPEEAVEDPDEEDEDntsEAEnGFSLEEVLR (L) RPWRPEEAVEDPDEEDEDN(1.0)T(0.99)S(0.99)EAEN(1.0)GFS(0.0)LEEVLR n:Deamidated,t:Phosphorylated T,s:Phosphorylated S CEBPZ 121599.4 2 6 1132.1 173.97 HUMAN 1 2.0652 12.8048 DEEDGKDSDEAEDAE-p Q5F1R6-3;S302-p DEEDGKDSDEAEDAE 0.41142359827487 0.925464839352614 -0.497 0.0733333333333334 7.1158139003301 0.475047439273037 -0.497 0.0733333333333333 0.194275757041579 0.896386394402294 -1.48127098673287 0.136453305119572 Q5F1R6 DNAJC21 Q5F1R6.3.S302.p_DNAJC21 Q5F1R6-3_S302s _1_1_302_302 Q5F1R6-3 Q5F1R6-2|Q5F1R6-3 Isoform 3 of DnaJ homolog subfamily C member 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22702.22702.4 26.05 26.05 10.95 3 1 1 0 984.4201 3854.6988 S302s TMT10 295 (K) DEEDGKDsDEAEDAELYDDLYCPACDK (S) DEEDGKDS(0.99)DEAEDAELY(0.0)DDLY(0.0)CPACDK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DNAJC21 64139.2 1 2 1325.1 153.94 HUMAN 1 -7.1158 0.475 DEEDGRDSDEEGAEG-p P48634;S350-p DEEDGRDSDEEGAEG 0.529869436073776 0.0178038368389318 -0.186 0.344333333333333 5.10368943966467 24.0964937146096 -0.186 0.344333333333333 0.308767126447119 0.00389359368215849 -1.12302622849274 4.81280029043498 P48634 PRRC2A P48634.S350.p_PRRC2A P48634_S342sS350s_2_2_342_350 P48634 P48634|P48634-3|P48634-2 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10725.10725.5 8.8 8.8 8.796 5 2 2 0 994.0446 4806.2566 S342s S350s TMT10 339 (K) LKFsDEEDGRDsDEEGAEGHRDSQSASGEERPPEADGK (K) LKFS(0.99)DEEDGRDS(0.99)DEEGAEGHRDS(0.0)QS(0.0)AS(0.0)GEERPPEADGK K:TMT10,s:Phosphorylated S PRRC2A 229315.4 1 35 36.1 882.05 HUMAN 1 -5.1037 24.0965 DEEEAQGSGESDGED-p Q9UPN7;S635-p DEEEAQGSGESDGED 0.55827821703547 0.534542852397453 0.130333333333333 0.104666666666667 4.67289370515605 3.65915120573791 0.130333333333333 0.104666666666667 0.340965650425037 0.430610761740293 1.0437580697314 0.851252884160275 Q9UPN7 PPP6R1 Q9UPN7.S635.p_PPP6R1 Q9UPN7_S635s _1_1_635_635 Q9UPN7 Q9UPN7 Serine/threonine-protein phosphatase 6 regulatory subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20837.20837.3 29.63 29.63 1.246 3 1 1 0 1432.2441 4214.7504 S635s TMT10 617 (R) IQQFDDDEEEEDEEEAQGsGESDGEDGAWQGSQLAR (G) IQQFDDDEEEEDEEEAQGS(0.99)GES(0.0)DGEDGAWQGS(0.0)QLAR s:Phosphorylated S PPP6R1 97349.5 2 2 1319.1 154.5 HUMAN 1 4.6729 3.6592 DEEEDDDSEEDEEDD-p P19338;S153-p DEEEDDDSEEDEEDD 0.637010245491109 0.00615440935818188 0.108666666666667 1.26633333333333 3.65255944927108 31.8603221063596 0.108666666666667 1.26633333333333 0.431264842465893 0.00065158006605413 0.850104709531433 7.00669270472329 P19338 NCL P19338.S153.p_NCL P19338_S153s _1_1_153_153 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14527.14527.4 23.88 23.53 7.666 2 1 1 0 1358.0674 5349.2697 S153s TMT10 139 (K) NAKKEDSDEEEDDDsEEDEEDDEDEDEDEDEIEPAAMK (A) NAKKEDS(0.0)DEEEDDDS(0.99)EEDEEDDEDEDEDEDEIEPAAMK K:TMT10,s:Phosphorylated S NCL 76670.1 4 8 114.1 570.88 HUMAN 1 3.6526 31.8603 DEEEDEESDDADDTP-p Q92794;S1113-p DEEEDEESDDADDTP 0.595442771647465 0.714724619109205 0.0703333333333333 0.036 4.15506128089168 2.00691505174076 0.0703333333333333 0.036 0.38414383869933 0.629953502356064 0.946656058232081 0.510273563638229 Q92794 KAT6A Q92794.S1113.p_KAT6A Q92794_S1113s _1_1_1113_1113 Q92794 Q92794 Histone acetyltransferase KAT6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24765.24765.5 18.18 18.18 3.638 4 1 1 0 743.3776 3632.8634 S1113s TMT10 1104 (K) SKDEEEDEEsDDADDTPILKPVSLLR (K) S(0.0)KDEEEDEES(0.99)DDADDT(0.0)PILKPVS(0.0)LLR K:TMT10,s:Phosphorylated S KAT6A 227705.4 6 17 903.1 203.52 HUMAN 1 4.1551 2.0069 DEEEDEYSGGLC___-p Q99747;S308-p DEEEDEYSGGLC___ 0.253551933885431 0.917853968998671 0.330333333333333 0.014 11.3527501280031 0.524366847195142 0.330333333333333 0.014 0.0732360625955069 0.886264421686594 2.2180275769624 0.149896614698022 Q99747 NAPG Q99747.S308.p_NAPG Q99747_S308s _1_1_308_308 Q99747 Q99747|Q99747-2 Gamma-soluble NSF attachment protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15243.15243.4 30.74 30.74 1.91 6 1 1 0 966.2154 3781.8681 S308s TMT10 283 (K) KSPATPQAKPDGVTATAADEEEDEYsGGLC (-) KS(0.0)PAT(0.0)PQAKPDGVT(0.0)AT(0.0)AADEEEDEY(0.0)S(0.99)GGLC K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NAPG 35088 2 3 3028.1 62.81 HUMAN 1 11.3528 0.5244 DEEEDGVSEAASLEE-p Q9H0E9-2;S710-p DEEEDGVSEAASLEE 0.0933084416341688 0.5128857917452 -0.75 0.349333333333333 21.8915708523446 3.89022762095856 -0.75 0.349333333333333 0.00646908585220265 0.408297986195594 -4.29717827208392 0.895938801254731 Q9H0E9 BRD8 Q9H0E9.2.S710.p_BRD8 Q9H0E9-2_S710sS714s_2_2_710_714 Q9H0E9-2 Q9H0E9|Q9H0E9-2|B5MCW3|Q9H0E9-4|Q9H0E9-3 Isoform 2 of Bromodomain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17005.17005.3 19.37 17.27 99 2 2 2 0 974.42 2761.294 S710s S714s TMT10 698 (K) DAPGEDEEEDGVsEAAsLEEPK (E) DAPGEDEEEDGVS(1.0)EAAS(1.0)LEEPK K:TMT10,s:Phosphorylated S BRD8 103294.1 1 12 654.1 253.82 HUMAN 1 -21.8916 3.8902 DEEEECPSEETDIIS-p Q8WW38;S29-p DEEEECPSEETDIIS 0.64009150118223 0.0390852826823794 0.065 0.273 3.61942487067638 18.9065577945614 0.065 0.273 0.434567769484574 0.012863057782357 0.8436453883517 3.64494064481007 Q8WW38 ZFPM2 Q8WW38.S29.p_ZFPM2 Q8WW38_S29s _1_1_29_29 Q8WW38 Q8WW38 Zinc finger protein ZFPM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21968.21968.4 15.41 15.41 1.119 3 1 1 0 843.6434 3291.5826 S29s TMT10 14 (K) RPLEDAIEDEEEECPsEETDIISK (G) RPLEDAIEDEEEECPS(0.99)EET(0.0)DIIS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZFPM2 130381.7 2 1 1154.1 171.84 HUMAN 1 3.6194 18.9066 DEEENEESDNEKETE-p P11388-2;S1132-p DEEENEESDNEKETE 0.179149402258917 0.0790634202102687 -0.316666666666667 -0.316666666666667 14.7455510076552 14.6268899629182 -0.316666666666667 -0.316666666666667 0.0335308759720626 0.0344596612369281 -2.83086388674449 -2.80698652264794 P11388 TOP2A P11388.2.S1132.p_TOP2A P11388-2_S1132s _1_1_1132_1132 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9206.9206.5 25.77 24.22 6.647 2 1 1 0 746.9668 3650.8327 S1132s TMT10 1118 (K) EAQQKVPDEEENEEsDNEKETEK (S) EAQQKVPDEEENEES(0.99)DNEKET(0.0)EK K:TMT10,s:Phosphorylated S TOP2A 178239.3 23 5 71.2 658.36 HUMAN 1 -14.7456 -14.6269 DEEEVLHSPRLTNSA-p Q9BXL6;S60-p DEEEVLHSPRLTNSA 0.828449738752208 0.0916782500803288 0.0506666666666667 -0.289666666666667 1.56978926102473 13.7255991532663 0.0506666666666667 -0.289666666666667 0.696660318344015 0.04240724747775 0.411270689348481 -2.64112794792501 Q9BXL6 CARD14 Q9BXL6.S60.p_CARD14 Q9BXL6_S60s _1_1_60_60 Q9BXL6 Q9BXL6 Caspase recruitment domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19834.19834.3 14.25 14.25 99 1 1 1 0 711.6786 2053.0586 S60s TMT10 48 (K) VLCQLDEEEVLHsPR (L) VLCQLDEEEVLHS(1.0)PR C:Carbamidomethylation,s:Phosphorylated S CARD14 114922.3 1 1 816.1 219.94 HUMAN 1 1.5698 -13.7256 DEEFAGSSPQSSKST-p Q9Y2M0;S180-p DEEFAGSSPQSSKST 0.691389053217 0.00539147169776956 -0.0576666666666667 -0.573 3.00518167977822 32.919756382068 -0.0576666666666667 -0.573 0.500589610767968 0.000510533637608593 -0.721464559693128 -7.35887499533284 Q9Y2M0 FAN1 Q9Y2M0.S180.p_FAN1 Q9Y2M0_S180s _1_1_180_180 Q9Y2M0 Q9Y2M0|Q9Y2M0-2|H3BQ24 Fanconi-associated nuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12670.12670.3 14.57 14.57 1.105 5 1 1 0 860.4362 2499.3182 S180s TMT10 169 (K) SIDKDEEFAGSsPQSSK (S) S(0.0)IDKDEEFAGS(0.0)S(0.99)PQS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S FAN1 116048.4 5 3 1860.1 110.7 HUMAN 1 -3.0052 -32.9198 DEEKGEGTPREEGKA-p E7ERS3;T162-p DEEKGEGTPREEGKA 0.186537097140737 0.00295034438929059 -0.756 0.815666666666667 14.3351399098055 38.1516567747384 -0.756 0.815666666666667 0.0368541168951489 0.000153050348391028 -2.75466108809878 9.33029251578172 E7ERS3 ZC3H18 E7ERS3.T162.p_ZC3H18 E7ERS3_T162t _1_1_162_162 E7ERS3 E7ERS3|Q86VM9|Q86VM9-2 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6413.6413.5 17.37 17.37 99 1 1 1 0 555.0729 2691.3676 T162t TMT10 150 (K) AGAEDDEEKGEGtPREEGK (A) AGAEDDEEKGEGT(1.0)PREEGK K:TMT10,t:Phosphorylated T ZC3H18 109165.8 3 8 157.1 499.97 HUMAN 1 -14.3351 38.1517 DEEKLPASPKHQERG-p Q7RTP6;S1143-p DEEKLPASPKHQERG 0.285875157174419 0.799187427273081 -0.269 -0.0543333333333333 10.262174530037 1.3613840800357 -0.269 -0.0543333333333334 0.0941418106640459 0.730906109357577 -2.02729821018164 -0.362185200740713 Q7RTP6 MICAL3 Q7RTP6.S1143.p_MICAL3 Q7RTP6_S1143s _1_1_1143_1143 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12929.12929.3 13.77 10.68 8.357 2 1 1 0 732.7302 2116.2105 S1143s TMT10 1133 (R) VSEDEEKLPAsPK (H) VS(0.0)EDEEKLPAS(0.99)PK K:TMT10,s:Phosphorylated S MICAL3 225431.9 1 7 190.1 466.81 HUMAN 1 -10.2622 -1.3614 DEEKSENSSEDGDIT-p Q5C9Z4;S320-p DEEKSENSSEDGDIT 0.567656016658623 0.034743893649904 -0.0951666666666667 0.353 4.52732137148869 19.651208536882 -0.0951666666666667 0.353 0.352588272331194 0.0108362532524709 -1.01667793014652 3.80101473298708 Q5C9Z4 NOM1 Q5C9Z4.S320.p_NOM1 Q5C9Z4_S320sS321s_2_2_320_321 Q5C9Z4 Q5C9Z4 Nucleolar MIF4G domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11746.11746.3 16.24 16.24 2.152 4 2 2 0 955.0693 2703.2521 S320s S321s Hydrogen 310 (R) FAEDEEKSENssEDGDITDK (S) FAEDEEKS(0.0)ENS(0.99)S(0.99)EDGDIT(0.0)DK K:TMT10-Lys-Only,s:Phosphorylated S NOM1 96826.2 3 6 2040.1 101.14 HUMAN 2 -4.5273 19.6512 DEELTNDSLTLSQSK-p A0A0U1RRH6;S290-p DEELTNDSLTLSQSK 0.575591035656153 0.490518417207478 0.0833333333333333 0.0706666666666667 4.41181552770844 4.13466336744925 0.0833333333333333 0.0706666666666667 0.362091597746743 0.385952326568631 0.995074469583047 0.942621041028326 A0A0U1RRH6 NotFound A0A0U1RRH6.S290.p_NotFound A0A0U1RRH6_S290s _1_1_290_290 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17073.17073.4 18.6 15.49 1.137 6 1 1 0 652.063 2525.2619 S290s TMT10 279 (R) NSADDEELTNDsLTLSQSK (S) NS(0.0)ADDEELT(0.0)NDS(0.99)LT(0.0)LS(0.0)QS(0.0)K K:TMT10,s:Phosphorylated S PHF14 109152.4 5 7 126.1 543.2 HUMAN 1 4.4118 4.1347 DEEMKTDSDDLLEVC-p O14646;S252-p DEEMKTDSDDLLEVC 0.630558105709775 0.169775455599321 0.0676666666666667 0.158666666666667 3.72515960715118 10.1268445325545 0.0676666666666667 0.158666666666667 0.424115396999534 0.0971215370039649 0.864214995343606 2.00293498829456 O14646 CHD1 O14646.S252.p_CHD1 O14646_T250tS252s_2_2_250_252 O14646 O14646|O14646-2 Chromodomain-helicase-DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26049.26049.5 19.14 16.79 2.504 6 2 2 0 1159.924 5619.6609 M248m T250t S252s TMT10 235 (R) QATVNVSYKEDEEmKtDsDDLLEVCGEDVPQPEEEEFETIER (F) QAT(0.0)VNVS(0.0)Y(0.0)KEDEEM(1.0)KT(0.99)DS(0.99)DDLLEVCGEDVPQPEEEEFET(0.0)IER K:TMT10,C:Carbamidomethylation,m:Oxidized methionine,t:Phosphorylated T,s:Phosphorylated S CHD1 197825.1 2 14 848.1 212.75 HUMAN 1 3.7252 10.1268 DEEQPQLSDEEKMQN-p Q8WVC0;S238-p DEEQPQLSDEEKMQN 0.0721955710812666 0.00338010316755577 -0.654333333333333 1.754 24.5740455477306 36.9573275661748 -0.654333333333333 1.754 0.00348815235100275 0.000201496377767876 -4.93669828105751 8.84349188117585 Q8WVC0 LEO1 Q8WVC0.S238.p_LEO1 Q8WVC0_S238s _1_1_238_238 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9719.9719.3 16.3 16.3 11.918 2 1 1 0 810.3644 2349.1094 S238s TMT10 227 (K) QNSDDEEQPQLsDEEK (M) QNS(0.0)DDEEQPQLS(0.99)DEEK K:TMT10,s:Phosphorylated S LEO1 75516.9 1 6 514.1 286.88 HUMAN 1 -24.574 36.9573 DEESGILSEAEKVTT-p Q3T8J9-3;S426-p DEESGILSEAEKVTT 0.181080338359562 0.0549635143527122 -0.310666666666667 0.270333333333333 14.6327202317048 16.7876573013312 -0.310666666666667 0.270333333333333 0.0344134312480865 0.0209524237991945 -2.80984717082334 3.21851399951029 Q3T8J9 GON4L Q3T8J9.3.S426.p_GON4L Q3T8J9-3_S426s _1_1_426_426 Q3T8J9-3 Q3T8J9|Q3T8J9-3|A0A087WUE6|Q3T8J9-2|A4PB68 Isoform 3 of GON-4-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18691.18691.3 22.54 22.54 2.332 6 1 1 0 913.4175 2658.2704 S426s TMT10 411 (R) QSSEMTETDEESGILsEAEK (V) QS(0.0)S(0.0)EMT(0.0)ET(0.0)DEES(0.0)GILS(0.99)EAEK K:TMT10,s:Phosphorylated S GON4L 250541.8 1 7 291.1 381.52 HUMAN 1 -14.6327 16.7877 DEESHSLSPPGENTV-p Q96JQ2;S526-p DEESHSLSPPGENTV 0.95468712279199 0.421313691411322 -0.00866666666666667 -0.076 0.39496042149413 4.99628858600738 -0.00866666666666667 -0.076 0.913069756322696 0.316498124918464 -0.114368185284618 -1.10315510086831 Q96JQ2 CLMN Q96JQ2.S526.p_CLMN Q96JQ2_S526s _1_1_526_526 Q96JQ2 Q96JQ2 Calmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19777.19777.3 15.83 15.83 1.124 5 1 1 0 988.7803 2884.3621 S526s Hydrogen 518 (R) HDEESHSLsPPGENTVMADSFQIK (V) HDEES(0.0)HS(0.0)LS(0.99)PPGENT(0.0)VMADS(0.0)FQIK K:TMT10-Lys-Only,s:Phosphorylated S CLMN 112105.2 5 8 726.1 236.61 HUMAN 1 -0.395 -4.9963 DEEVHGSSDDSKQSK-p Q03188;S710-p DEEVHGSSDDSKQSK 0.811946613276641 0.0439711539603473 0.056 0.289833333333333 1.73917826131442 18.1699346610534 0.056 0.289833333333333 0.670011371832934 0.0152407568311248 0.450233843237372 3.4938443438625 Q03188 CENPC Q03188.S710.p_CENPC Q03188_S709sS710s_2_2_709_710 Q03188 Q03188 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7063.7063.3 13.03 13.03 3.858 3 2 2 0 789.3216 2206.0148 S709s S710s TMT10 699 (K) NDVDDEEVHGssDDSK (Q) NDVDDEEVHGS(0.99)S(0.99)DDS(0.0)K K:TMT10,s:Phosphorylated S CENPC 107459.5 4 27 209.1 442.77 HUMAN 2 1.7392 18.1699 DEEVRVRSPTRSPSV-p Q03164-3;S161-p DEEVRVRSPTRSPSV 0.347222085693526 0.188100008274328 0.145 0.164666666666667 8.53589967026867 9.54578779865962 0.145 0.164666666666667 0.140090934707241 0.111025112046061 1.72802266559481 1.90216423796806 Q03164 KMT2A Q03164.3.S161.p_KMT2A Q03164-3_S161s _1_1_161_161 Q03164-3 Q03164-3 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5247.5247.4 7.62 6.01 3.951 4 1 1 0 438.7538 1672.027 S161s TMT10 159 (R) VRsPTRSPSVK (T) VRS(0.99)PT(0.0)RS(0.0)PS(0.0)VK K:TMT10,s:Phosphorylated S KMT2A 436608.3 2 3 26.1 936.8 HUMAN 1 8.5359 9.5458 DEEWGGHSPRSPRGW-p Q86X29-6;S308-p DEEWGGHSPRSPRGW 0.584821521640916 0.199087515118742 0.0866666666666667 -0.257 4.28394425577068 9.22395244678026 0.0866666666666667 -0.257 0.37291132646577 0.119565189174688 0.971031397798579 -1.84645487276549 Q86X29 LSR Q86X29.6.S308.p_LSR Q86X29-6_S308s _1_1_308_308 Q86X29-6 Q86X29|Q86X29-4|Q86X29-3|S4R3V8|Q86X29-2|Q86X29-5|Q86X29-6 Isoform 6 of Lipolysis-stimulated lipoprotein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11715.11715.5 20.23 16.91 1.343 3 1 1 0 525.6649 2544.3269 S308s TMT10 293 (R) GPALTPIRDEEWGGHsPRSPR (G) GPALT(0.0)PIRDEEWGGHS(0.99)PRS(0.0)PR s:Phosphorylated S LSR 54725.6 7 8 206.1 448.79 HUMAN 1 4.2839 -9.224 DEFIIDESDQSFASR-p Q03188;S308-p DEFIIDESDQSFASR 0.849516481351664 0.125548379068969 0.0356666666666667 0.186333333333333 1.37076777220267 11.883978437236 0.0356666666666667 0.186333333333333 0.729328563717024 0.0648040511711856 0.364459260303933 2.31063256008047 Q03188 CENPC Q03188.S308.p_CENPC Q03188_S308s _1_1_308_308 Q03188 Q03188|Q03188-2 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30013.30013.3 15.45 15.45 2.481 3 1 1 0 808.3801 2343.1554 S308s TMT10 298 (K) LIEDEFIIDEsDQSFASR (S) LIEDEFIIDES(0.99)DQS(0.0)FAS(0.0)R s:Phosphorylated S CENPC 107459.5 1 15 209.1 442.77 HUMAN 1 1.3708 11.884 DEFKRKYSNEDTLSV-p P26641-2;S348-p DEFKRKYSNEDTLSV 0.280329017949824 0.0124767762446552 -0.337 0.409333333333333 10.4376412283253 26.5675561620852 -0.337 0.409333333333333 0.090414040368221 0.0022041664305032 -2.05785698715018 5.44470607933266 P26641 EEF1G P26641.2.S348.p_EEF1G P26641-2_S348s _1_1_348_348 P26641-2 P26641-2 Isoform 2 of Elongation factor 1-gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32246.32246.5 23.07 21.76 2.289 5 1 1 0 672.1453 3276.7184 S348s TMT10 346 (R) KYsNEDTLSVALPYFWEHFDK (D) KY(0.0)S(0.99)NEDT(0.0)LS(0.0)VALPY(0.0)FWEHFDK K:TMT10,s:Phosphorylated S EEF1G 56491.1 5 5 2076.1 98.89 HUMAN 1 -10.4376 26.5676 DEFVNDDTDDDLPIS-p Q6PD62;T925-p DEFVNDDTDDDLPIS 0.842496162695007 0.545458912245071 0.0313333333333333 0.0606666666666667 1.43913237850133 3.54050415812966 0.0313333333333333 0.0606666666666667 0.717937704553556 0.442536996721364 0.380671248111869 0.828081369262711 Q6PD62 CTR9 Q6PD62.T925.p_CTR9 Q6PD62_T925t _1_1_925_925 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19509.19509.5 26.54 21.52 10.681 3 1 1 0 785.8199 3845.0829 T925t TMT10 911 (R) SKKGGEFDEFVNDDtDDDLPISKK (K) S(0.0)KKGGEFDEFVNDDT(0.99)DDDLPIS(0.0)KK K:TMT10,t:Phosphorylated T CTR9 134412.8 31 1 152.1 508.81 HUMAN 1 1.4391 3.5405 DEGMPKSYLPQTVRQ-p P40189;Y905-p DEGMPKSYLPQTVRQ 0.560423836734948 0.0133279730379841 -0.0936666666666667 -0.373333333333333 4.63545320553635 26.0791622503452 -0.0936666666666667 -0.373333333333333 0.343917820159464 0.00246651507960723 -1.03680833851623 -5.31538049582312 P40189 IL6ST P40189.Y905.p_IL6ST P40189_Y905y _1_1_905_905 P40189 P40189|P40189-3 Interleukin-6 receptor subunit beta GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12862.12910.2 15.41 8.23 1.611 3 1 1 0 636.8314 1192.6887 Y905y TMT10 904 (K) SyLPQTVR (Q) S(0.0)Y(0.99)LPQT(0.0)VR y:Phosphorylated Y IL6ST 104561.7 2 1 232.1 15.41 HUMAN 1 -4.6355 -26.0792 DEGPLNLTLDSDGGR-p M0QXA7;T218-p DEGPLNLTLDSDGGR 0.252662050474958 0.0148060720959221 -0.201666666666667 -0.363666666666667 11.3914911628857 25.338766059149 -0.201666666666667 -0.363666666666667 0.0725856689613479 0.0029249833217921 -2.22484303141927 -5.12358254733473 M0QXA7 WIZ M0QXA7.T218.p_WIZ M0QXA7_T218t_1_1_218_218 M0QXA7 M0QXA7|O95785-3 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.29745.30148.4 11 11 1.131 4 1 1 0 1205.3129 4737.2714 N216n T218t TMT10 204 (K) AQWPQSEDEGPLnLtLDSDGGRELDCQLCGAWFETRK (G) AQWPQS(0.0)EDEGPLN(1.0)LT(0.99)LDS(0.0)DGGRELDCQLCGAWFET(0.0)RK C:Carbamidomethylation,K:TMT10,n:Deamidated,t:Phosphorylated T WIZ 104190.1 3 6 195.1 461.51 HUMAN 1 -11.3915 -25.3388 DEGPQPRSVEPQDAG-p Q9NZT2;S349-p DEGPQPRSVEPQDAG 0.326802591871946 0.940153263293064 -0.194666666666667 -0.0103333333333333 9.08866862578814 0.382098388899632 -0.194666666666667 -0.0103333333333333 0.12334829120932 0.915777905057949 -1.82371307826319 -0.110777445838322 Q9NZT2 OGFR Q9NZT2.S349.p_OGFR Q9NZT2_S349s _1_1_349_349 Q9NZT2 Q9NZT2|Q9NZT2-2|A0A0A0MRN5 Opioid growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12421.12421.3 14.79 14.79 99 1 1 1 0 536.2607 1526.8012 S349s TMT10 349 (R) sVEPQDAGPLER (S) S(1.0)VEPQDAGPLER s:Phosphorylated S OGFR 73893.9 2 2 620.1 259.74 HUMAN 1 -9.0887 -0.3821 DEGTLGGSPTKKAVT-p Q9UPV0;S1213-p DEGTLGGSPTKKAVT 0.220753787202438 0.00165401543705715 -0.260333333333333 -1.02966666666667 12.6302219997519 44.2433343605495 -0.260333333333333 -1.02966666666667 0.0545729964118544 3.76414690031322e-05 -2.44464349201343 -12.2150975335273 Q9UPV0 CEP164 Q9UPV0.S1213.p_CEP164 Q9UPV0_S1213s _1_1_1213_1213 Q9UPV0 Q9UPV0|Q9UPV0-2 Centrosomal protein of 164 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29597.29597.4 24.9 24.9 1.303 6 1 1 0 861.6965 3363.7887 S1213s TMT10 1193 (K) LNQLESSLWEEASDEGTLGGsPTKK (A) LNQLES(0.0)S(0.0)LWEEAS(0.0)DEGT(0.0)LGGS(0.99)PT(0.0)KK K:TMT10,s:Phosphorylated S CEP164 164824.4 2 5 1433.1 142.71 HUMAN 1 -12.6302 -44.2433 DEICIAGSPLTPRRV-p Q08999;S639-p DEICIAGSPLTPRRV 0.270871529957664 0.00517709629283449 0.165666666666667 0.523 10.7517130985352 33.2546088481335 0.165666666666667 0.523 0.0841063314141182 0.000472649404644228 2.1126662078952 7.47323474768079 Q08999 RBL2 Q08999.S639.p_RBL2 Q08999_S639s _1_1_639_639 Q08999 Q08999 Retinoblastoma-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19844.19844.2 11.74 11.74 11.744 2 1 1 0 904.9443 1728.9152 S639s TMT10 631 (R) ADEICIAGsPLTPR (R) ADEICIAGS(0.99)PLT(0.0)PR C:Carbamidomethylation,s:Phosphorylated S RBL2 129790.7 3 5 408.1 323.79 HUMAN 1 10.7517 33.2546 DEIEGLSSDEEH___-p Q6PD74;S311-p DEIEGLSSDEEH___ 0.862721178211236 0.823310497635034 0.025 -0.0236666666666667 1.25124866692864 1.18310734477674 0.025 -0.0236666666666666 0.749678633602026 0.76153394317018 0.335766041226463 -0.319166390531698 Q6PD74 AAGAB Q6PD74.S311.p_AAGAB Q6PD74_S310sS311s_2_2_310_311 Q6PD74 Q6PD74|Q6PD74-2 Alpha- and gamma-adaptin-binding protein p34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30400.30606.3 17.26 17.26 99 2 2 2 0 951.727 2693.2351 S310s S311s TMT10 294 (K) AFWMAIGGDRDEIEGLssDEEH (-) AFWMAIGGDRDEIEGLS(1.0)S(1.0)DEEH s:Phosphorylated S AAGAB 34935.3 37 3 3745.1 44.06 HUMAN 1 1.2512 -1.1831 DEIFYTLSPVNGKIT-p Q9H4M9;S456-p DEIFYTLSPVNGKIT 0.114688242267433 0.00292573679022132 -0.364 -0.645 19.6003672049409 38.2282215950944 -0.364 -0.645 0.0109638549056972 0.000150375761804038 -3.79370492365278 -9.36230315868502 Q9H4M9 EHD1 Q9H4M9.S456.p_EHD1 Q9H4M9_S456s_1_1_456_456 Q9H4M9 A0A024R571|Q9H4M9 EH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26482.26482.3 24.95 19.76 1.108 5 1 1 0 952.4931 2774.522 S456s N459n TMT10 444 (K) DKPTYDEIFYTLsPVnGK (I) DKPT(0.0)Y(0.0)DEIFY(0.0)T(0.0)LS(0.99)PVN(1.0)GK K:TMT10,s:Phosphorylated S,n:Deamidated EHD1 60682.8 9 8 1572.1 130.65 HUMAN 1 -19.6004 -38.2282 DEIMKIETPAPRKPP-p Q9BST9;T433-p DEIMKIETPAPRKPP 0.97076436181379 0.0290122281092194 0.00666666666666667 -0.291333333333333 0.254518706435729 20.8138756656937 0.00666666666666665 -0.291333333333333 0.94307911952522 0.00829110534878727 0.0747765358000496 -4.05184502631151 Q9BST9 RTKN Q9BST9.T433.p_RTKN Q9BST9_T433t _1_1_433_433 Q9BST9 Q9BST9|Q9BST9-2|Q9BST9-3 Rhotekin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15180.15180.3 13.04 6 99 1 1 1 0 796.0519 2306.1707 T433t TMT10 423 (K) QCCDEIMKIEtPAPR (K) QCCDEIMKIET(1.0)PAPR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T RTKN 63465.1 3 5 1486.1 137.99 HUMAN 1 0.2545 -20.8139 DEIYIAPSGVQKERI-p Q96GX9;S61-p DEIYIAPSGVQKERI 0.511696284595283 0.0408860219514069 0.140666666666667 0.264333333333333 5.38041540308871 18.6094398685576 0.140666666666667 0.264333333333333 0.289706646976251 0.0137738710598293 1.17333690544729 3.58361174979167 Q96GX9 APIP Q96GX9.S61.p_APIP Q96GX9_S61s _1_1_61_61 Q96GX9 Q96GX9 Methylthioribulose-1-phosphate dehydratase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15214.15214.3 15.54 15.54 8.279 2 1 1 0 684.6917 1972.0904 S61s TMT10 52 (K) HGDEIYIAPsGVQK (E) HGDEIY(0.0)IAPS(0.99)GVQK K:TMT10,s:Phosphorylated S APIP 27752.4 2 1 3832.1 42.1 HUMAN 1 5.3804 18.6094 DEIYRKGSISVFEVD-p O95251;S403-p DEIYRKGSISVFEVD 0.716292953587446 0.00404166522938193 0.105 0.623333333333333 2.73283145899751 35.252217438078 0.105 0.623333333333333 0.53298729177974 0.000298385871943216 0.665604554138608 8.18752861515135 O95251 KAT7 O95251.S403.p_KAT7 O95251_S403s _1_1_403_403 O95251 O95251|O95251-4|O95251-2|O95251-5|O95251-3 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17748.17748.4 10.87 10.87 1.101 2 1 1 0 598.3529 2310.4203 S403s TMT10 401 (R) KGsISVFEVDGKK (N) KGS(0.99)IS(0.0)VFEVDGKK K:TMT10,s:Phosphorylated S KAT7 71325.8 1 11 691.1 243.06 HUMAN 1 2.7328 35.2522 DEKAMGTSPAPKSSD-p O00750;S1487-p DEKAMGTSPAPKSSD 0.78030934257184 0.0260831248155939 -0.042 -0.329 2.07148806254559 21.5340467798471 -0.042 -0.329 0.620656336686948 0.00702417498363261 -0.524576018630569 -4.2118504979534 O00750 PIK3C2B O00750.S1487.p_PIK3C2B O00750_S1487s _1_1_1487_1487 O00750 O00750|F5GWN5 Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9179.9179.2 9.22 9.22 1.361 2 1 1 0 699.3664 1317.7601 S1487s TMT10 1483 (K) AMGTsPAPK (S) AMGT(0.0)S(0.99)PAPK K:TMT10,s:Phosphorylated S PIK3C2B 186932.5 3 10 1730.1 119.12 HUMAN 1 -2.0715 -21.534 DEKDPEKSPTKKQEV-p J3KPF0;S3815-p DEKDPEKSPTKKQEV 0.191575424903808 0.00496189114685024 -0.454666666666667 -0.654333333333333 14.0087208420178 33.6080600955803 -0.454666666666667 -0.654333333333333 0.039730855431116 0.000435706451365184 -2.6945197905056 -7.59557790424381 J3KPF0 NotFound J3KPF0.S3815.p_NotFound J3KPF0_S3815s _1_1_3815_3815 J3KPF0 J3KPF0|F8VWT9|Q9Y4D8|Q9Y4D8-4 Probable E3 ubiquitin-protein ligase HECTD4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7535.7535.4 11.52 8.16 1.333 3 1 1 0 703.6531 2731.6215 S3815s TMT10 3805 (K) SKPDEKDPEKsPTK (K) S(0.0)KPDEKDPEKS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S HECTD4 490564.1 2 13 927.1 199.75 HUMAN 1 -14.0087 -33.6081 DEKELESSEEGGSAE-p Q9HAS0;S19-p DEKELESSEEGGSAE 0.348078907514723 0.0746300329356068 -0.333333333333333 0.288666666666667 8.51624701986854 14.9587779352082 -0.333333333333333 0.288666666666667 0.140726309313126 0.0319243605091214 -1.724619842428 2.86885776807695 Q9HAS0 C17orf75 Q9HAS0.S19.p_C17orf75 Q9HAS0_S18sS19s_2_2_18_19 Q9HAS0 Q9HAS0|J9JIC5|J3QKQ1 Protein Njmu-R1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7145.7145.3 8.14 8.14 8.137 3 2 2 0 633.2505 1737.7976 S18s S19s TMT10 15 (K) ELEssEEGGSAEER (R) ELES(0.99)S(0.99)EEGGS(0.0)AEER s:Phosphorylated S C17orf75 45305.4 2 5 2125.1 96.67 HUMAN 1 -8.5162 14.9588 DEKKDQDSK______-p Q86SX6;S156-p DEKKDQDSK______ 0.194748055065004 0.0875693496458792 0.303 0.252666666666667 13.8641409930802 14.0020070709425 0.303 0.252666666666667 0.0410757877141394 0.0397923229757108 2.66800828718704 2.69167204225744 Q86SX6 GLRX5 Q86SX6.S156.p_GLRX5 Q86SX6_S156s _1_1_156_156 Q86SX6 Q86SX6 Glutaredoxin-related protein 5, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15587.15587.5 14.14 14.14 14.144 2 1 1 0 650.9808 3170.9122 S156s TMT10 140 (K) KLGIHSALLDEKKDQDsK (-) KLGIHS(0.0)ALLDEKKDQDS(0.99)K K:TMT10,s:Phosphorylated S GLRX5 16741.7 2 1 4715.1 27.54 HUMAN 1 13.8641 14.002 DEKLFEESDDKEDED-p O43719;S676-p DEKLFEESDDKEDED 0.159987408261037 0.00481148783311339 -0.926666666666667 1.146 15.933311537251 33.8452703539823 -0.926666666666667 1.146 0.0255075558524154 0.00041254655475596 -3.05539584701105 7.6786388432898 O43719 HTATSF1 O43719.S676.p_HTATSF1 O43719_S676s _1_1_676_676 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17662.17662.3 20.54 20.54 99 1 1 1 0 1251.924 3673.7898 S676s TMT10 672 (K) LFEEsDDKEDEDADGKEVEDADEK (L) LFEES(1.0)DDKEDEDADGKEVEDADEK K:TMT10,s:Phosphorylated S HTATSF1 86421.8 8 14 149.1 512 HUMAN 1 -15.9333 33.8453 DEKNLGVSQKLVSPS-p Q9H4L5-2;S11-p DEKNLGVSQKLVSPS 0.122554525096102 0.0204028582267751 -0.588 -0.718 18.9787877318168 23.1406757848288 -0.588 -0.718 0.0126508942900979 0.00485212992619298 -3.66313368254594 -4.58258892745901 Q9H4L5 OSBPL3 Q9H4L5.2.S11.p_OSBPL3 Q9H4L5-2_S11s _1_1_11_11 Q9H4L5-2 Q9H4L5-2|Q9H4L5-3|Q9H4L5-4|Q9H4L5-5|Q9H4L5-6|Q9H4L5-7|Q9H4L5-8 Isoform 1b of Oxysterol-binding protein-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11470.11470.2 11.1 1.68 99 1 1 1 0 642.3597 1203.7461 S11s TMT10 7 (K) NLGVsQK (L) NLGVS(1.0)QK K:TMT10,s:Phosphorylated S OSBPL3 98654.8 1 4 683.1 244.57 HUMAN 1 -18.9788 -23.1407 DEKRRRKSVEDRFDQ-p P15924;S1127-p DEKRRRKSVEDRFDQ 0.819486223186259 0.285306158979453 -0.0393333333333333 0.230666666666667 1.66581551195338 7.18517757496803 -0.0393333333333333 0.230666666666667 0.681425605588619 0.191197514588461 -0.433453239123472 1.49296675681658 P15924 DSP P15924.S1127.p_DSP P15924_S1127s _1_1_1127_1127 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10975.10975.5 16.61 6.3 6.081 2 1 1 0 662.3475 3227.7376 S1127s Hydrogen 1125 (R) RKsVEDRFDQQKNDYDQLQK (A) RKS(0.99)VEDRFDQQKNDY(0.0)DQLQK K:TMT10-Lys-Only,s:Phosphorylated S DSP 334221.3 11 7 104.1 590.4 HUMAN 1 -1.6658 7.1852 DELEDLPSPPPPLSP-p Q9NQX3-2;S188-p DELEDLPSPPPPLSP 0.79813572883131 0.0241846702089274 -0.0446666666666667 0.304666666666667 1.88868170687583 22.0263777659563 -0.0446666666666667 0.304666666666667 0.647339084548312 0.00627136710107898 -0.484006204400056 4.32338492130479 Q9NQX3 GPHN Q9NQX3.2.S188.p_GPHN Q9NQX3-2_S188sS194s_2_2_188_194 Q9NQX3-2 F5H039|Q9NQX3-2|G3V582 Isoform 2 of Gephyrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19363.19363.5 17.78 17.78 6.697 6 2 2 0 853.2266 4102.1588 S188s S194s TMT10 178 (K) EVHDELEDLPsPPPPLsPPPTTSPHKQTEDK (G) EVHDELEDLPS(0.99)PPPPLS(0.99)PPPT(0.0)T(0.0)S(0.0)PHKQT(0.0)EDK K:TMT10,s:Phosphorylated S GPHN 84130.7 7 7 1469.1 139.8 HUMAN 1 -1.8887 22.0264 DELKGARSLETVYLE-p Q15435;S322-p DELKGARSLETVYLE 0.804323507790035 0.309804184181098 -0.0353333333333333 0.211666666666667 1.82328247798261 6.72504605313866 -0.0353333333333333 0.211666666666667 0.657160955203784 0.212566780424612 -0.469301010602742 1.41241785974335 Q15435 PPP1R7 Q15435.S322.p_PPP1R7 Q15435_S322s _1_1_322_322 Q15435 Q15435|Q15435-2 Protein phosphatase 1 regulatory subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19877.19877.3 15.57 15.57 3.837 3 1 1 0 667.0209 1919.0799 S322s Hydrogen 322 (R) sLETVYLERNPLQK (D) S(0.99)LET(0.0)VY(0.0)LERNPLQK K:TMT10-Lys-Only,s:Phosphorylated S PPP1R7 41677.6 1 5 1222.1 164.72 HUMAN 1 -1.8233 6.725 DELLECLSPATSRTF-p Q93009;S963-p DELLECLSPATSRTF 0.08581207963261 0.631758831576157 -0.338333333333333 0.0606666666666667 22.8191851669576 2.71149334546099 -0.338333333333333 0.0606666666666667 0.00522494211338444 0.535612452557684 -4.51181247714472 0.661090608505742 Q93009 USP7 Q93009.S963.p_USP7 Q93009_S963s _1_1_963_963 Q93009 Q93009|Q93009-3 Ubiquitin carboxyl-terminal hydrolase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23886.23886.3 23.65 23.65 1.415 3 1 1 0 859.426 2496.2966 S963s TMT10 949 (K) IIGVHQEDELLECLsPATSR (T) IIGVHQEDELLECLS(0.99)PAT(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S USP7 129383.8 2 6 1927.1 106.49 HUMAN 1 -22.8192 2.7115 DELLGNLSETELKQL-p Q9NYL9;S25-p DELLGNLSETELKQL 0.504217646194434 0.213103599277153 -0.150333333333333 -0.128 5.49030028844347 8.83352892178458 -0.150333333333333 -0.128 0.282468465825386 0.130811856063008 -1.19319784160865 -1.77891937161697 Q9NYL9 TMOD3 Q9NYL9.S25.p_TMOD3 Q9NYL9_S25s _1_1_25_25 Q9NYL9 Q9NYL9 Tropomodulin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26202.26202.3 21.55 15.32 1.165 3 1 1 0 997.8525 2911.5755 S25s TMT10 12 (K) YKDLDEDELLGNLsETELK (Q) Y(0.0)KDLDEDELLGNLS(0.99)ET(0.0)ELK K:TMT10,s:Phosphorylated S TMOD3 39765.2 5 1 3273.1 55.27 HUMAN 1 -5.4903 -8.8335 DELSKTISPMVMDAK-p P18206-2;S795-p DELSKTISPMVMDAK 0.724833992929236 0.288264886300684 0.0563333333333333 0.113 2.64676089444573 7.12690760375197 0.0563333333333333 0.113 0.543655655898363 0.19378012852865 0.647704565414572 1.4827928114352 P18206 VCL P18206.2.S795.p_VCL P18206-2_S795s _1_1_795_795 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20973.20973.3 9.51 9.51 2.487 2 1 1 0 544.2836 1550.8686 S795s TMT10 793 (K) TIsPMVMDAK (A) T(0.0)IS(0.99)PMVMDAK K:TMT10,s:Phosphorylated S VCL 117290.9 4 17 319.1 365.38 HUMAN 1 2.6468 7.1269 DELSRESSPDIEEIS-p F8W8Y7;S1892-p DELSRESSPDIEEIS 0.467749698751906 0.795443429069991 0.112333333333333 0.0286666666666667 6.09304281853397 1.38810604212302 0.112333333333333 0.0286666666666667 0.245864438857943 0.726422681239831 1.30112147174903 0.368545881575079 F8W8Y7 ARMCX4 F8W8Y7.S1892.p_ARMCX4 F8W8Y7_S1891sS1892s_2_2_1891_1892 F8W8Y7 F8W8Y7 Armadillo repeat-containing X-linked protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21458.21480.3 11.17 8.21 2.592 4 2 2 0 921.7493 2603.2998 S1891s S1892s TMT10 1881 (R) NVGEDELSREssPDIEEISLR (S) NVGEDELS(0.0)RES(0.99)S(0.99)PDIEEIS(0.0)LR s:Phosphorylated S ARMCX4 237557.4 1 2 5520.1 18.56 HUMAN 1 6.093 1.3881 DELTCCVSD______-p Q9BTC8;S593-p DELTCCVSD______ 0.148266672319898 0.197518189023215 0.283666666666667 0.212 16.7473479824942 9.26886764390397 0.283666666666667 0.212 0.0211478003520099 0.118335005584011 3.21303708923137 1.85422671966161 Q9BTC8 MTA3 Q9BTC8.S593.p_MTA3 Q9BTC8_S593s _1_1_593_593 Q9BTC8 Q9BTC8|D6W5A2 Metastasis-associated protein MTA3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10449.10449.3 13.69 13.69 1.108 4 1 1 0 777.3162 2249.9753 S593s TMT10 578 (R) NYSHHNGLDELTCCVsD (-) NY(0.0)S(0.0)HHNGLDELT(0.0)CCVS(0.99)D C:Carbamidomethylation,s:Phosphorylated S MTA3 68244.2 1 8 1441.1 142.09 HUMAN 1 16.7473 9.2689 DENEHQLSLRTVSLG-p P06748;S43-p DENEHQLSLRTVSLG 0.512436496519705 0.33158652723907 -0.141 0.0943333333333333 5.36622144227967 6.35139860548653 -0.141 0.0943333333333334 0.290655038451236 0.231664847446399 -1.17076678781514 1.34659147369102 P06748 NPM1 P06748.S43.p_NPM1 P06748_S43s _1_1_43_43 P06748 P06748|P06748-2|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13424.13424.4 20.05 20.05 20.049 2 1 1 0 700.0897 2717.3684 S43s TMT10 28 (K) DYHFKVDNDENEHQLsLR (T) DY(0.0)HFKVDNDENEHQLS(0.99)LR K:TMT10,s:Phosphorylated S NPM1 32745.6 1 3 78.1 640.75 HUMAN 1 -5.3662 6.3514 DENFEDHSAPPSPEE-p Q99683;S1029-p DENFEDHSAPPSPEE 0.525597536013745 0.104004279118281 0.11 -0.235333333333333 5.16684595706089 12.9851573757246 0.11 -0.235333333333333 0.304309425603164 0.0502903041772571 1.13454743977705 -2.50701907893635 Q99683 MAP3K5 Q99683.S1029.p_MAP3K5 Q99683_S1029sS1033s_2_2_1029_1033 Q99683 Q99683|Q99683-2 Mitogen-activated protein kinase kinase kinase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30260.30286.3 9.92 9.92 9.923 3 2 2 0 1063.1683 3027.5352 S1029s S1033s TMT10 1015 (R) TLFLGIPDENFEDHsAPPsPEEK (D) T(0.0)LFLGIPDENFEDHS(0.99)APPS(0.99)PEEK K:TMT10,s:Phosphorylated S MAP3K5 155846.3 1 3 3812.1 42.57 HUMAN 1 5.1668 -12.9852 DENKRTPSPGPVESK-p Q5T0W9;S869-p DENKRTPSPGPVESK 0.286533226429727 0.238897386866004 -0.187 0.115333333333333 10.2434173793903 8.19169027827577 -0.187 0.115333333333333 0.0945492878490235 0.15164600448904 -2.02403391691367 1.6678562962516 Q5T0W9 FAM83B Q5T0W9.S869.p_FAM83B Q5T0W9_S869s _1_1_869_869 Q5T0W9 Q5T0W9 Protein FAM83B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7552.7552.2 12.94 12.94 2.342 3 1 1 0 654.326 1227.6782 S869s Hydrogen 867 (R) TPsPGPVESK (F) T(0.0)PS(0.99)PGPVES(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S FAM83B 115253.5 10 17 249.1 407.75 HUMAN 1 -10.2434 8.1917 DENSVDISMLKTGSS-p O75717;S387-p DENSVDISMLKTGSS 0.153500655417395 0.0362655689559175 0.301 -0.257333333333333 16.3573123517745 19.390013540743 0.301 -0.257333333333333 0.0231349606325651 0.0115079680090254 3.13710214840519 -3.7458768340489 O75717 WDHD1 O75717.S387.p_WDHD1 O75717_S387s _1_1_387_387 O75717 O75717|O75717-2 WD repeat and HMG-box DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22659.22659.3 18.2 18.2 2.377 3 1 1 0 828.4114 2403.2478 S387s TMT10 374 (R) SHILEDDENSVDIsMLK (T) S(0.0)HILEDDENS(0.0)VDIS(0.99)MLK K:TMT10,s:Phosphorylated S WDHD1 127448.5 1 6 554.1 273.24 HUMAN 1 16.3573 -19.39 DENVEFDSDEEEPPD-p Q9BWG6;S219-p DENVEFDSDEEEPPD 0.590876065472109 0.936488570957403 -0.0716666666666667 -0.0083333333333333 4.20910621070986 0.402587002126673 -0.0716666666666667 -0.0083333333333333 0.379393057013292 0.911467735194174 -0.956895302761951 -0.116476289700749 Q9BWG6 SCNM1 Q9BWG6.S219.p_SCNM1 Q9BWG6_S219s _1_1_219_219 Q9BWG6 Q9BWG6|Q9BWG6-2 Sodium channel modifier 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25913.25913.3 17.74 17.74 99 1 1 1 0 976.0967 2846.3093 S219s Hydrogen 209 (R) WVKDENVEFDsDEEEPPDLPLD (-) WVKDENVEFDS(1.0)DEEEPPDLPLD K:TMT10-Lys-Only,s:Phosphorylated S SCNM1 26177.2 5 3 1939.1 106.1 HUMAN 1 -4.2091 -0.4026 DENWRRFSDQFPLPL-p Q92973;S881-p DENWRRFSDQFPLPL 0.0990612726298986 0.143783821153633 -0.438 -0.160333333333333 21.2472349861868 11.095040260445 -0.438 -0.160333333333333 0.0075037179496365 0.0777134114486089 -4.15188111906471 -2.17177910200137 Q92973 TNPO1 Q92973.S881.p_TNPO1 Q92973_S881s _1_1_881_881 Q92973 Q92973|Q92973-2|Q92973-3 Transportin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25347.25347.3 14.3 14.3 99 1 1 1 0 629.3502 1806.0678 S881s TMT10 879 (R) RFsDQFPLPLK (E) RFS(1.0)DQFPLPLK K:TMT10,s:Phosphorylated S TNPO1 103836.6 1 3 4746.1 27.12 HUMAN 1 -21.2472 -11.095 DENYENDSVRQLENE-p Q9Y4J8-15;S654-p DENYENDSVRQLENE 0.566452368577728 0.387773066328873 -0.0773333333333334 0.111333333333333 4.54790158095594 5.46867527941789 -0.0773333333333334 0.111333333333333 0.350921390786668 0.283878480577269 -1.02051611484736 1.18903439658383 Q9Y4J8 DTNA Q9Y4J8.15.S654.p_DTNA Q9Y4J8-15_S654s _1_1_654_654 Q9Y4J8-15 Q9Y4J8|Q9Y4J8-15|Q9Y4J8-14|Q9Y4J8-2|Q9Y4J8-13|Q9Y4J8-11|Q9Y4J8-10|Q9Y4J8-6|M0QZ28|M0R0C4 Isoform 15 of Dystrobrevin alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30600.30600.4 23.14 19.65 1.494 5 1 1 0 1269.0729 4993.292 S654s TMT10 632 (R) GDMVTEDADPYVQPEDENYENDsVRQLENELQMEEYLK (Q) GDMVT(0.0)EDADPY(0.0)VQPEDENY(0.0)ENDS(0.99)VRQLENELQMEEY(0.0)LK K:TMT10,s:Phosphorylated S DTNA 83008.6 3 24 792.1 224.62 HUMAN 1 -4.5479 5.4687 DENYEVGSDDEEIPF-p O15541;S253-p DENYEVGSDDEEIPF 0.981575064370413 0.0204028582267751 0.005 0.387666666666667 0.161420067653372 23.1400964500649 0.005 0.387666666666667 0.963513919764663 0.00485277722777297 0.0479003278808536 4.58245164575287 O15541 RNF113A O15541.S253.p_RNF113A O15541_S253s _1_1_253_253 O15541 O15541 RING finger protein 113A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26717.26717.2 22.12 20.41 4.57 4 1 1 0 1518.1831 2955.3824 S253s TMT10 241 (R) YGVYEDENYEVGsDDEEIPFK (C) Y(0.0)GVY(0.0)EDENY(0.0)EVGS(0.99)DDEEIPFK K:TMT10,s:Phosphorylated S RNF113A 39528.2 11 3 1876.1 109.61 HUMAN 1 0.1614 23.1401 DEPEDLDTEDEGLIS-p A0A087WXK5;T2443-p DEPEDLDTEDEGLIS 0.20055874973276 0.061137602641716 0.204 0.329333333333333 13.5739820224121 16.1629244506611 0.204 0.329333333333333 0.0439138786832399 0.0241939932381738 2.61502807190888 3.09732007002209 A0A087WXK5 NotFound A0A087WXK5.T2443.p_NotFound A0A087WXK5_T2443t _1_1_2443_2443 A0A087WXK5 A0A087WXK5|Q9BZC7-3|J3QSS3 ATP-binding cassette sub-family A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28810.29012.3 23.97 23.97 8.462 2 1 1 0 1010.7898 2950.3891 T2443t TMT10 2432 (R) ALVADEPEDLDtEDEGLISFEEER (A) ALVADEPEDLDT(0.99)EDEGLIS(0.0)FEEER t:Phosphorylated T ABCA2 275398.6 3 9 1069.1 180.75 HUMAN 1 13.574 16.1629 DEPGEPPSPSLTTTS-p Q9H2D6;S1796-p DEPGEPPSPSLTTTS 0.0360961121648541 0.22517381738597 -0.644666666666667 -0.139666666666667 33.1060167958976 8.52792977120405 -0.644666666666667 -0.139666666666667 0.000489100740573542 0.140348256814252 -7.43569950100022 -1.72605707578059 Q9H2D6 TRIOBP Q9H2D6.S1796.p_TRIOBP Q9H2D6_S1796s _1_1_1796_1796 Q9H2D6 Q9H2D6|Q9H2D6-3|Q9H2D6-7|Q9H2D6-5|Q9H2D6-6 TRIO and F-actin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29799.29799.5 22.01 22.01 2.295 9 1 1 0 746.3835 3647.9234 S1796s TMT10 1783 (K) GWMSILDEPGEPPsPSLTTTSTSQWKK (H) GWMS(0.0)ILDEPGEPPS(0.99)PS(0.0)LT(0.0)T(0.0)T(0.0)S(0.0)T(0.0)S(0.0)QWKK K:TMT10,s:Phosphorylated S TRIOBP 264280.7 5 2 1168.1 170.4 HUMAN 1 -33.106 -8.5279 DEPSKVQTLNEQDWE-p Q13136;T572-p DEPSKVQTLNEQDWE 0.329289630661066 0.00749056293245618 0.306 -0.965333333333333 9.01980663296579 30.3935361993987 0.306 -0.965333333333333 0.125319697154881 0.00091336923684284 1.81179161802185 -6.54220782137383 Q13136 PPFIA1 Q13136.T572.p_PPFIA1 Q13136_T572t _1_1_572_572 Q13136 Q13136|Q13136-2 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18760.18760.4 10.28 10.28 1.812 2 1 1 0 759.8927 2956.5893 T572t TMT10 560 (R) LAALRDEPSKVQtLNEQDWER (A) LAALRDEPS(0.0)KVQT(0.99)LNEQDWER K:TMT10,t:Phosphorylated T PPFIA1 136347 1 28 248.1 410.18 HUMAN 1 9.0198 -30.3935 DEPSSEESDLEIDKE-p P50502;S79-p DEPSSEESDLEIDKE 0.0747292224794687 0.555836224015967 -0.519333333333333 0.137333333333333 24.1247907130849 3.43643583134291 -0.519333333333333 0.137333333333333 0.00386830695591125 0.453269416521406 -4.82547402650542 0.807621885419339 P50502 ST13 P50502.S79.p_ST13 P50502_S79s _1_1_79_79 P50502 P50502|Q8IZP2|Q3KNR6 Hsc70-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15881.15881.3 12.92 10.33 4.119 3 1 1 0 734.6774 2122.044 S79s TMT10 71 (K) ADEPSSEEsDLEIDK (E) ADEPS(0.0)S(0.0)EES(0.99)DLEIDK K:TMT10,s:Phosphorylated S ST13 41502.2 1 2 2700.1 73.52 HUMAN 1 -24.1248 3.4364 DEQEMRASPKISRKC-p O75592;S2947-p DEQEMRASPKISRKC 0.846999570571814 0.0545135922298958 0.031 -0.296 1.39630209531256 16.8442657964982 0.031 -0.296 0.725053061160259 0.0206810897984823 0.37053111983341 -3.22959143694487 O75592 MYCBP2 O75592.S2947.p_MYCBP2 O75592_S2947s _1_1_2947_2947 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10358.10398.4 12.85 7.43 99 1 1 1 0 592.5734 2287.3047 S2947s TMT10 2936 (K) APLKDEQEMRAsPK (I) APLKDEQEMRAS(1.0)PK K:TMT10,s:Phosphorylated S MYCBP2 518176.7 7 16 252.1 405.77 HUMAN 1 1.3963 -16.8443 DEQPPWASPSPTSRQ-p A0A0G2JPP5;S1437-p DEQPPWASPSPTSRQ 0.201281555980522 0.309804184181098 0.196333333333333 0.197666666666667 13.5271006468892 6.72555306465838 0.196333333333333 0.197666666666667 0.0443904896261971 0.212541966037102 2.6064956016704 1.41250690373696 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1437.p_SCRIB A0A0G2JPP5_S1437sS1439s_2_2_1437_1439 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28306.28306.3 15.41 15.41 1.603 5 2 2 0 1153.1644 3297.5596 S1437s S1439s TMT10 1416 (R) LALDGETLGEEEQEDEQPPWAsPsPTSR (Q) LALDGET(0.0)LGEEEQEDEQPPWAS(0.99)PS(0.99)PT(0.0)S(0.0)R s:Phosphorylated S SCRIB 178690.9 2 49 22.1 1004.81 HUMAN 1 13.5271 6.7256 DEQPSTLSPKKKQRN-p A0A1W2PQA0;S711-p DEQPSTLSPKKKQRN 0.123350251698765 0.00514141392999062 -0.286 -0.682333333333333 18.9154407705173 33.3079838128307 -0.286 -0.682333333333333 0.0128367748194143 0.000466876074544906 -3.64996110290061 -7.49160182595748 A0A1W2PQA0 NotFound A0A1W2PQA0.S711.p_NotFound A0A1W2PQA0_S711s _1_1_711_711 A0A1W2PQA0 A0A1W2PRB0|A0A1W2PQA0|A0A1W2PPY5|A0A1W2PSD3|A0A1W2PQK5|A0A1W2PNQ3|D5MRH1 Calcium-activated potassium channel subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10754.10754.3 18.04 19.73 1.13 3 1 1 0 680.0262 1958.0959 S711s TMT10 701 (K) RLEDEQPSTLsPK (K) RLEDEQPS(0.0)T(0.0)LS(0.99)PK K:TMT10,s:Phosphorylated S KCNMA1 139284.7 4 1 2591.1 77.42 HUMAN 1 -18.9154 -33.308 DERMHLPSPTDSNFY-p P00533;S991-p DERMHLPSPTDSNFY 0.864679832642579 0.0650880030066552 -0.03 -0.235333333333333 1.22841407217917 15.7880958044109 -0.03 -0.235333333333333 0.753630719364863 0.0263748755785011 -0.330231495300173 -3.02550456269774 P00533 EGFR P00533.S991.p_EGFR P00533_S991s _1_1_991_991 P00533 P00533|E9PFD7|Q504U8 Epidermal growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18308.18308.3 14.51 14.51 2.928 4 1 1 0 625.2894 1793.8842 S991s TMT10 987 (R) MHLPsPTDSNFYR (A) MHLPS(0.99)PT(0.0)DS(0.0)NFY(0.0)R s:Phosphorylated S EGFR 137698.3 2 2 521.2 283.33 HUMAN 1 -1.2284 -15.7881 DERNRPLSDEELDAM-p O75533;S400-p DERNRPLSDEELDAM 0.455145758341492 0.0862815171991767 -0.112 0.191 6.304846891869 14.0870825709756 -0.112 0.191 0.234161402602876 0.0390204023223377 -1.33869307810781 2.70728474041393 O75533 SF3B1 O75533.S400.p_SF3B1 O75533_S400s _1_1_400_400 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24082.24082.4 17.83 17.83 10.468 2 1 1 0 663.0732 2569.3009 S400s TMT10 396 (R) NRPLsDEELDAMFPEGYK (V) NRPLS(0.99)DEELDAMFPEGY(0.0)K K:TMT10,s:Phosphorylated S SF3B1 146569.5 5 26 53.1 735.77 HUMAN 1 -6.3048 14.0871 DERVKEPSQDTVATE-p Q96RU2;S67-p DERVKEPSQDTVATE 0.311976772001396 0.00714231278100688 0.150333333333333 0.555333333333333 9.46350433600483 30.7446714344064 0.150333333333333 0.555333333333333 0.113148699432597 0.000842428122947249 1.8886336099595 6.65104183456295 Q96RU2 USP28 Q96RU2.S67.p_USP28 Q96RU2_S67s _1_1_67_67 Q96RU2 Q96RU2|Q96RU2-2|Q96RU2-3|F5GZ74 Ubiquitin carboxyl-terminal hydrolase 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13797.13797.3 19.42 19.42 1.201 5 1 1 0 1047.5383 3060.6304 S67s TMT10 63 (R) VKEPsQDTVATEPSEVEGSAANK (E) VKEPS(0.99)QDT(0.0)VAT(0.0)EPS(0.0)EVEGS(0.0)AANK K:TMT10,s:Phosphorylated S USP28 123630 4 1 1212.1 166.18 HUMAN 1 9.4635 30.7447 DERVSSRSHTEEDCT-p P07919;S61-p DERVSSRSHTEEDCT 0.481836619360747 0.243461523801961 0.12 0.151333333333333 5.83445939781968 8.08338468751537 0.12 0.151333333333333 0.260948052637322 0.155475345738112 1.25501720214755 1.64909415528356 P07919 UQCRH P07919.S61.p_UQCRH P07919_S61s _1_1_61_61 P07919 P07919 Cytochrome b-c1 complex subunit 6, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24830.24830.3 12.29 12.29 1.161 3 1 1 0 772.6454 2235.9611 S61s Hydrogen 61 (R) sHTEEDCTEELFDFLHAR (D) S(0.99)HT(0.0)EEDCT(0.0)EELFDFLHAR C:Carbamidomethylation,s:Phosphorylated S UQCRH 11023.9 2 2 3976.1 39.91 HUMAN 1 5.8345 8.0834 DESENSRSPGNKSDN-p Q16637;S175-p DESENSRSPGNKSDN 0.822004837548017 0.0148369648359156 0.04 -0.39 1.6381202927098 25.3153695657256 0.04 -0.39 0.685784982722349 0.00294078343521254 0.427081286551794 -5.11760350849318 Q16637 SMN1 Q16637.S175.p_SMN1 Q16637_S175s _1_1_175_175 Q16637 Q16637|E7EQZ4|Q16637-3|A0A1W2PRV5|Q16637-2|Q16637-4|B4DP61 Survival motor neuron protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7166.7166.4 15.07 15.07 7.9 2 1 1 0 513.7913 1972.1794 S175s Hydrogen 175 (R) sPGNKSDNIKPK (S) S(0.99)PGNKS(0.0)DNIKPK K:TMT10-Lys-Only,s:Phosphorylated S SMN1 32304.6 2 5 1780.1 115.32 HUMAN 1 1.6381 -25.3154 DESGSILSDISFDKT-p Q9H0H5;S154-p DESGSILSDISFDKT 0.267768114255681 0.110780589782491 -0.280333333333333 -0.227666666666667 10.8444538866315 12.6152870352646 -0.280333333333333 -0.227666666666667 0.0823293357288293 0.0547609906960932 -2.1288806822217 -2.44067727443787 Q9H0H5 RACGAP1 Q9H0H5.S154.p_RACGAP1 Q9H0H5_S154sS157s_2_2_154_157 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33153.33153.4 20.84 20.84 1.225 10 2 2 0 1102.2926 4246.2222 S154s S157s TMT10 142 (K) RLSTIDESGSILsDIsFDKTDESLDWDSSLVK (T) RLS(0.0)T(0.0)IDES(0.0)GS(0.0)ILS(0.99)DIS(0.99)FDKT(0.0)DES(0.0)LDWDS(0.0)S(0.0)LVK K:TMT10,s:Phosphorylated S RACGAP1 71709.9 3 18 574.1 268.64 HUMAN 1 -10.8445 -12.6153 DESLANLSEDEYYSE-p O60341;S131-p DESLANLSEDEYYSE 0.687121855784496 0.0402491024580841 0.0553333333333333 0.29 3.05942750424811 18.7098824486952 0.0553333333333333 0.29 0.494375852314334 0.0134589678320448 0.732457061299414 3.60428546264562 O60341 KDM1A O60341.S131.p_KDM1A O60341_S131s _1_1_131_131 O60341 O60341-2 Lysine-specific histone demethylase 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20849.20849.2 22.58 22.58 6.12 5 1 1 0 1374.062 2667.1453 S131s TMT10 122 (R) EMDESLANLsEDEYYSEEER (N) EMDES(0.0)LANLS(0.99)EDEY(0.0)Y(0.0)S(0.0)EEER s:Phosphorylated S KDM1A 93414.4 25 5 232.1 420.78 HUMAN 1 3.0594 18.7099 DESSEEDSEDEEPPP-p Q5SSJ5;S446-p DESSEEDSEDEEPPP 0.674594569293558 0.00463734855393385 -0.199666666666667 0.758 3.20277484238453 34.1447717467511 -0.199666666666667 0.758 0.478324378360612 0.000385055051582509 -0.761305645679402 7.78462043124103 Q5SSJ5 HP1BP3 Q5SSJ5.S446.p_HP1BP3 Q5SSJ5_S441sS442sS446s_3_3_441_446 Q5SSJ5 Q5SSJ5|Q5SSJ5-2|Q5SSJ5-3 Heterochromatin protein 1-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10530.10949.5 19.75 19.75 12.515 4 3 3 0 861.9416 4065.7783 S441s S442s S446s TMT10 426 (K) KEPDDSRDEDEDEDEssEEDsEDEEPPPK (R) KEPDDS(0.0)RDEDEDEDES(0.99)S(0.99)EEDS(0.99)EDEEPPPK K:TMT10,s:Phosphorylated S HP1BP3 61491.1 4 9 1424.1 144.01 HUMAN 1 -3.2028 34.1448 DESSLSMSKSKSESK-p Q9BZF1;S93-p DESSLSMSKSKSESK 0.535204694146268 0.0188603715271035 -0.15 -0.411333333333333 5.02523198498506 23.7255048630118 -0.15 -0.411333333333333 0.314395847646244 0.00424081681971536 -1.10868000693172 -4.72255452479135 Q9BZF1 OSBPL8 Q9BZF1.S93.p_OSBPL8 Q9BZF1_S93s _1_1_93_93 Q9BZF1 Q9BZF1|Q9BZF1-2|Q9BZF1-3 Oxysterol-binding protein-related protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12630.12630.4 9.49 9.49 1.147 5 1 1 0 745.6434 2899.5853 S93s TMT10 77 (R) GKEDISQNKDESSLSMsK (S) GKEDIS(0.0)QNKDES(0.0)S(0.0)LS(0.0)MS(0.99)K K:TMT10,s:Phosphorylated S OSBPL8 101821.3 1 5 1293.1 156.92 HUMAN 1 -5.0252 -23.7255 DESSLTASPQKKRRF-p Q9NZC9;S934-p DESSLTASPQKKRRF 0.947625064272277 0.0734114957947127 0.01 0.201 0.463899950966493 15.0615237018611 0.01 0.201 0.898690198062145 0.0311779552821583 0.13341011263723 2.88810388060668 Q9NZC9 SMARCAL1 Q9NZC9.S934.p_SMARCAL1 Q9NZC9_S934s_1_1_934_934 Q9NZC9 Q9NZC9 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31475.31475.5 23.28 19.08 2.205 14 1 1 0 1013.2574 4966.2618 M922m S934s TMT10 893 (K) EGSDMELLEAAESFDPGSASGTSGSSSQNmGDTLDESSLTAsPQK (K) EGS(0.0)DM(0.0)ELLEAAES(0.0)FDPGS(0.0)AS(0.0)GT(0.0)S(0.0)GS(0.0)S(0.0)S(0.0)QNM(0.99)GDT(0.0)LDES(0.0)S(0.0)LT(0.0)AS(0.99)PQK K:TMT10,m:Oxidized methionine,s:Phosphorylated S SMARCAL1 106506.6 10 6 1258.1 161.3 HUMAN 1 0.4639 15.0615 DESSPVLSPRKPSHP-p Q8NA72;S109-p DESSPVLSPRKPSHP 0.118247229564978 0.0127616927756643 -0.418666666666667 -0.821666666666667 19.2967949825651 26.3974597617562 -0.418666666666667 -0.821666666666667 0.0117576492883168 0.00229220799949092 -3.72963378329373 -5.39940682148424 Q8NA72 POC5 Q8NA72.S109.p_POC5 Q8NA72_S109s _1_1_109_109 Q8NA72 Q8NA72|Q8NA72-3 Centrosomal protein POC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10322.10322.2 11.19 8.14 1.847 4 1 1 0 748.864 1416.7532 S109s TMT10 101 (K) TDESSPVLsPR (K) T(0.0)DES(0.0)S(0.0)PVLS(0.99)PR s:Phosphorylated S POC5 63749.7 1 2 4119.1 37.22 HUMAN 1 -19.2968 -26.3975 DETEYEYSGSEEEEE-p A0A0D9SEY1;S324-p DETEYEYSGSEEEEE 0.996624147679768 0.0220632358795118 0.000666666666666663 0.354666666666667 0.0254692946294526 22.6291463037694 0.000666666666666651 0.354666666666667 0.994152640926957 0.00545865151707095 0.00767325060905435 4.46240726113429 A0A0D9SEY1 NotFound A0A0D9SEY1.S324.p_NotFound A0A0D9SEY1_S324sS326s_2_2_324_326 A0A0D9SEY1 O95819-3|A0A0D9SEY1|O95819-6|E7EN19|O95819-5 Mitogen-activated protein kinase kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21640.21640.4 25.14 25.14 1.596 9 2 2 0 1176.7504 4544.0434 S324s S326s TMT10 317 (K) DETEYEYsGsEEEEEEVPEQEGEPSSIVNVPGESTLRR (D) DET(0.0)EY(0.0)EY(0.0)S(0.99)GS(0.99)EEEEEEVPEQEGEPS(0.0)S(0.0)IVNVPGES(0.0)T(0.0)LRR s:Phosphorylated S MAP4K4 151879.6 8 13 131.2 535.29 HUMAN 1 0.0255 22.6291 DETFGEYSDNEEKAF-p P32004-2;S1177-p DETFGEYSDNEEKAF 0.506609842161293 0.0455756050039791 -0.140666666666667 0.253333333333333 5.44751169300636 17.949410114142 -0.140666666666667 0.253333333333333 0.285265223747245 0.0160346316827017 -1.18547159659581 3.44922032780887 P32004 L1CAM P32004.2.S1177.p_L1CAM P32004-2_S1177s _1_1_1177_1177 P32004-2 P32004-2|P32004-3 Isoform 2 of Neural cell adhesion molecule L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13815.13815.4 15.24 12.17 3.636 5 1 1 0 1073.0087 4209.0587 S1177s TMT10 1155 (K) DKEDTQVDSEARPMKDETFGEYsDNEEK (A) DKEDT(0.0)QVDS(0.0)EARPMKDET(0.0)FGEY(0.0)S(0.99)DNEEK K:TMT10,s:Phosphorylated S L1CAM 140484.6 1 1 4831.1 26.18 HUMAN 1 -5.4475 17.9494 DETQSIDSEDSFVPG-p Q8WZ73;S229-p DETQSIDSEDSFVPG 0.907362848442901 0.0543720110517977 -0.0256666666666667 0.284666666666667 0.828364555197522 16.8579425427511 -0.0256666666666667 0.284666666666667 0.826349073463066 0.0206160636186661 -0.230253464576957 3.23227021195829 Q8WZ73 RFFL Q8WZ73.S229.p_RFFL Q8WZ73_S229s _1_1_229_229 Q8WZ73 Q8WZ73|Q8WZ73-2 E3 ubiquitin-protein ligase rififylin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19704.19704.3 22.9 20.18 2.162 4 1 1 0 829.7121 2407.1462 S229s TMT10 218 (R) VPAEDETQSIDsEDSFVPGR (R) VPAEDET(0.0)QS(0.0)IDS(0.99)EDS(0.0)FVPGR s:Phosphorylated S RFFL 41768.5 2 2 2231.1 92.49 HUMAN 1 -0.8284 16.8579 DEVGRRQSLTSPDSQ-p Q15751;S2720-p DEVGRRQSLTSPDSQ 0.662515509657473 0.00618650355766278 -0.065 0.611666666666667 3.34890276625016 31.8298230753448 -0.065 0.611666666666667 0.462497855523935 0.000656171997160539 -0.790429642434892 6.99676614894135 Q15751 HERC1 Q15751.S2720.p_HERC1 Q15751_S2720s _1_1_2720_2720 Q15751 Q15751 Probable E3 ubiquitin-protein ligase HERC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4004.4004.4 14.65 14.65 2.394 5 1 1 0 545.7747 2100.1107 S2720s TMT10 2718 (R) RQsLTSPDSQSARPANR (T) RQS(0.99)LT(0.0)S(0.0)PDS(0.0)QS(0.0)ARPANR s:Phosphorylated S HERC1 539122.1 3 16 269.1 394.57 HUMAN 1 -3.3489 31.8298 DEVLAEGSPRSLSSV-p Q86VK4-5;S447-p DEVLAEGSPRSLSSV 0.479539297235704 0.128868486495911 0.122666666666667 0.185 5.87494773502576 11.7315811552223 0.122666666666667 0.185 0.258526595164189 0.0671184447332941 1.26225436999752 2.28370348461439 Q86VK4 ZNF410 Q86VK4.5.S447.p_ZNF410 Q86VK4-5_S447s_1_1_447_447 Q86VK4-5 Q86VK4-5|J3KNQ6|Q86VK4-4|A0A1W2PNT4 Isoform 5 of Zinc finger protein 410 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.33446.33448.3 26.6 21.73 0.623 7 1 1 0 1412.0251 4153.092 N433n S447s TMT10 412 (K) NLVSMNSQPSLGGESLNLPNTnSILGVDDEVLAEGsPR (S) N(0.0)LVS(0.0)MN(0.0)S(0.0)QPS(0.0)LGGES(0.0)LN(0.0)LPN(0.50)T(0.0)N(0.50)S(0.0)ILGVDDEVLAEGS(0.99)PR n:Deamidated,s:Phosphorylated S ZNF410 56741.1 11 2 3495.1 49.78 HUMAN 1 5.8749 11.7316 DEVPAGGSRSEAEDE-p Q9UJV9;S21-p DEVPAGGSRSEAEDE 0.92988945014909 0.0921031994455934 0.0143333333333333 0.249666666666667 0.626926106778278 13.699267978508 0.0143333333333333 0.249666666666667 0.865580351191543 0.042665142662154 0.177487386280071 2.63632718594573 Q9UJV9 DDX41 Q9UJV9.S21.p_DDX41 Q9UJV9_S21s _1_1_21_21 Q9UJV9 Q9UJV9|D6RGI7|D6RD33 Probable ATP-dependent RNA helicase DDX41 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6120.6120.2 10.12 10.12 5.297 2 1 1 0 649.3034 1217.6323 S21s TMT10 13 (R) TDEVPAGGsR (S) T(0.0)DEVPAGGS(0.99)R s:Phosphorylated S DDX41 70521.1 5 2 1480.1 138.65 HUMAN 1 0.6269 13.6993 DEYAEDSSDEEDIRN-p Q14137;S127-p DEYAEDSSDEEDIRN 0.194002306690035 0.268699764842559 0.206666666666667 0.109333333333333 13.8939309737718 7.51603577330743 0.206666666666667 0.109333333333333 0.0407949967270934 0.177172544598839 2.67346462757657 1.550613364948 Q14137 BOP1 Q14137.S127.p_BOP1 Q14137_S126sS127s_2_2_126_127 Q14137 Q14137|Q14137-2 Ribosome biogenesis protein BOP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32130.32130.4 15.81 15.81 1.154 6 2 2 0 1287.8026 4987.2768 S126s S127s N134n TMT10 118 (R) IGDEYAEDssDEEDIRnTVGNVPLEWYDDFPHVGYDLDGRR (I) IGDEY(0.0)AEDS(0.99)S(0.99)DEEDIRN(0.99)T(0.0)VGN(0.0)VPLEWY(0.0)DDFPHVGY(0.0)DLDGRR s:Phosphorylated S,n:Deamidated BOP1 84312.6 17 5 2879.1 67.41 HUMAN 1 13.8939 7.516 DEYIMSKTLGSGACG-p O96017-9;T268-p DEYIMSKTLGSGACG 0.461163119977294 0.00897185421594355 -0.126333333333333 0.873666666666667 6.19782196757409 28.9983714812849 -0.126333333333333 0.873666666666667 0.240003626063416 0.00125939757253226 -1.31972840008911 6.12378807946432 O96017 CHEK2 O96017.9.T268.p_CHEK2 O96017-9_T268t _1_1_268_268 O96017-9 O96017-9|O96017-12|O96017-4|O96017-7 Isoform 9 of Serine/threonine-protein kinase Chk2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11557.11557.3 15.47 12.72 2.183 2 1 1 0 539.6092 1536.8456 T268t TMT10 268 (K) tLGSGACGEVK (L) T(0.99)LGS(0.0)GACGEVK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CHEK2 66216.4 1 2 745.1 233.29 HUMAN 1 -6.1978 28.9984 DEYNVTPSPPGTVLT-p Q04721;S2070-p DEYNVTPSPPGTVLT 0.624494194306671 0.26903699442372 0.0706666666666667 -0.118666666666667 3.80084222683287 7.5089442829666 0.0706666666666667 -0.118666666666667 0.416788547873032 0.177462081718589 0.878863726935019 -1.54937974817369 Q04721 NOTCH2 Q04721.S2070.p_NOTCH2 Q04721_S2070s _1_1_2070_2070 Q04721 Q04721 Neurogenic locus notch homolog protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36215.36215.4 24.86 24.86 1.162 7 1 1 0 844.9302 3296.7398 S2070s TMT10 2061 (R) LLDEYNVTPsPPGTVLTSALSPVICGPNR (S) LLDEY(0.0)NVT(0.0)PS(0.99)PPGT(0.0)VLT(0.0)S(0.0)ALS(0.0)PVICGPNR C:Carbamidomethylation,s:Phosphorylated S NOTCH2 279264.6 8 6 1083.1 179.88 HUMAN 1 3.8008 -7.5089 DFAGMDASFKAFRSL-p Q9NW82;S217-p DFAGMDASFKAFRSL 0.139893346402386 0.199243039698926 -0.384 0.177 17.4799596779317 9.21875582131262 -0.384 0.177 0.0178650416157175 0.119708342591593 -3.35777312551762 1.84555572907355 Q9NW82 WDR70 Q9NW82.S217.p_WDR70 Q9NW82_S217s _1_1_217_217 Q9NW82 Q9NW82|D6RIW8 WD repeat-containing protein 70 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34599.34599.3 11.53 11.53 99 1 1 1 0 653.977 1879.9453 S217s TMT10 208 (K) FWDFAGMDAsFK (A) FWDFAGMDAS(1.0)FK K:TMT10,s:Phosphorylated S WDR70 73941.6 1 1 2493.1 81.24 HUMAN 1 -17.48 9.2188 DFARGAASPGPSRPG-p M0QZR4;S10-p DFARGAASPGPSRPG 0.615123191884599 0.343580144178496 0.0973333333333333 -0.0996666666666666 3.91689200845327 6.14718803275359 0.0973333333333334 -0.0996666666666667 0.405798838049049 0.242818178386084 0.901209759384718 -1.31042286936336 M0QZR4 NotFound M0QZR4.S10.p_NotFound M0QZR4_S10s_1_1_10_10 M0QZR4 M0QZR4|Q92888-4|Q92888-3|Q92888-2 Rho guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32317.32317.4 22.83 20.37 0.562 7 1 1 0 1392.9283 5487.708 S10s N33n TMT10 7 (R) GAAsPGPSRPGLVPVSIIGAEDEDFEnELETNSEEQNSQFQSLEQVK (R) GAAS(0.99)PGPS(0.0)RPGLVPVS(0.0)IIGAEDEDFEN(0.50)ELET(0.0)N(0.50)S(0.0)EEQN(0.0)S(0.0)QFQS(0.0)LEQVK K:TMT10,s:Phosphorylated S,n:Deamidated ARHGEF1 109006.6 5 1 2403.1 85.12 HUMAN 1 3.9169 -6.1472 DFDKAKPSPAPPSTT-p P40855;S35-p DFDKAKPSPAPPSTT 0.0466874864502887 0.00248947575194659 -0.855333333333333 -0.809 29.5900894994938 39.8226311224093 -0.855333333333333 -0.805864424157619 0.00109898319133155 0.000104168614479658 -6.30837041194843 -10.0518670996467 P40855 PEX19 P40855.S35.p_PEX19 P40855_S35s _1_1_35_35 P40855 P40855|B7Z8B3|E9PS71 Peroxisomal biogenesis factor 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10934.10934.3 16.7 16.7 3.589 6 1 1 0 925.1619 2693.5077 S35s TMT10 32 (K) AKPsPAPPSTTTAPDASGPQK (R) AKPS(0.99)PAPPS(0.0)T(0.0)T(0.0)T(0.0)APDAS(0.0)GPQK K:TMT10,s:Phosphorylated S PEX19 33091.2 2 1 2146.1 95.84 HUMAN 1 -29.5901 -39.8226 DFEMPPPSPPLNLHE-p A0A087X165;S900-p DFEMPPPSPPLNLHE 0.901435793384257 0.361081285667425 -0.019 0.088 0.884318040110941 5.86996700459187 -0.019 0.0880000000000001 0.815770875184125 0.25882325791068 -0.244603682849518 1.261070523632 A0A087X165 NotFound A0A087X165.S900.p_NotFound A0A087X165_S900s _1_1_900_900 A0A087X165 A0A087X165|Q9C0H9-5|Q9C0H9-2|Q9C0H9-4 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30268.30475.4 18.06 12.18 2.105 5 1 1 0 913.9657 3572.8711 S900s TMT10 891 (K) SVDFEMPPPsPPLNLHELSGPAEGASLTPK (G) S(0.0)VDFEMPPPS(0.99)PPLNLHELS(0.0)GPAEGAS(0.0)LT(0.0)PK K:TMT10,s:Phosphorylated S SRCIN1 130745.5 13 25 98.1 603.22 HUMAN 1 -0.8843 5.87 DFERTPQSPTLPPAK-p P78310;S332-p DFERTPQSPTLPPAK 0.686263649021844 0.0397961739519661 0.0636666666666667 -0.248333333333333 3.06875331956475 18.7799297758477 0.0636666666666667 -0.248333333333333 0.493315394146114 0.0132436294958453 0.734342608423496 -3.61873853159396 P78310 CXADR P78310.S332.p_CXADR P78310_S332s _1_1_332_332 P78310 P78310|P78310-6|P78310-2|P78310-7 Coxsackievirus and adenovirus receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10508.10716.2 12.15 7.71 1.349 3 1 1 0 723.3843 1365.7939 S332s Hydrogen 329 (R) TPQsPTLPPAK (V) T(0.0)PQS(0.99)PT(0.0)LPPAK K:TMT10-Lys-Only,s:Phosphorylated S CXADR 40599.7 8 1 3830.1 42.12 HUMAN 1 3.0688 -18.7799 DFESKLHSPERSPKT-p Q86VQ0;S501-p DFESKLHSPERSPKT 0.394448562512382 0.0945148469168856 0.158 0.201666666666667 7.45583771718831 13.5489458032513 0.158 0.201666666666667 0.179645452592294 0.0441677646189899 1.54059259128975 2.60896619577324 Q86VQ0 LCA5 Q86VQ0.S501.p_LCA5 Q86VQ0_S501s _1_1_501_501 Q86VQ0 Q86VQ0 Lebercilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4720.4720.4 7.08 7.08 7.076 2 1 1 0 397.9708 1508.8949 S501s TMT10 499 (K) LHsPERSPK (T) LHS(0.99)PERS(0.0)PK K:TMT10,s:Phosphorylated S LCA5 80723.9 1 1 7266.1 7.08 HUMAN 1 7.4558 13.5489 DFFKVTGSLSSAKRK-p P39748;S349-p DFFKVTGSLSSAKRK 0.696853109927181 0.505566966307205 -0.055 -0.0746666666666667 2.94660260570924 3.96970847088868 -0.055 -0.0746666666666667 0.507387471600608 0.400893627534125 -0.709545661453382 -0.911181443887117 P39748 FEN1 P39748.S349.p_FEN1 P39748_S349s _1_1_349_349 P39748 P39748|P39748-2 Flap endonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12369.12369.2 12.33 7.09 1.794 4 1 1 0 694.3836 1307.7935 S349s TMT10 346 (K) VTGsLSSAK (R) VT(0.0)GS(0.99)LS(0.0)S(0.0)AK K:TMT10,s:Phosphorylated S FEN1 42934.5 1 6 2496.1 81.21 HUMAN 1 -2.9466 -3.9697 DFFSTCRSPEACCEL-p P06132;S61-p DFFSTCRSPEACCEL 0.914408446792544 0.0837241574580962 0.017 0.197666666666667 0.761229330516776 14.2595157134491 0.017 0.197666666666667 0.839222399403143 0.0375014818228594 0.212864104798876 2.73901156561228 P06132 UROD P06132.S61.p_UROD P06132_S61s _1_1_61_61 P06132 P06132|A0A1B0GVZ4|A0A1B0GVN9 Uroporphyrinogen decarboxylase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24591.24591.4 21.22 21.22 1.184 4 1 1 0 792.3621 3086.4695 S61s TMT10 51 (R) AAQDFFSTCRsPEACCELTLQPLR (R) AAQDFFS(0.0)T(0.0)CRS(0.99)PEACCELT(0.0)LQPLR C:Carbamidomethylation,s:Phosphorylated S UROD 41128.5 5 1 4088.1 37.85 HUMAN 1 0.7612 14.2595 DFHMDFDSAVAPRAK-p P11388-2;S1530-p DFHMDFDSAVAPRAK 0.120014369208718 0.208357048608954 0.355666666666667 -0.143 19.1472345788935 8.9623812440322 0.355666666666667 -0.143 0.012169606679753 0.126987763821971 3.69828060241656 -1.80120576984934 P11388 TOP2A P11388.2.S1530.p_TOP2A P11388-2_S1530s _1_1_1530_1530 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17112.17112.3 21.71 21.71 21.707 3 1 1 0 883.7401 2569.2393 S1530s TMT10 1517 (K) SKGESDDFHMDFDsAVAPR (A) S(0.0)KGES(0.0)DDFHMDFDS(0.99)AVAPR K:TMT10,s:Phosphorylated S TOP2A 178239.3 8 16 71.2 658.36 HUMAN 1 19.1472 -8.9624 DFIGNNESPRKKFPP-p Q15032-2;S143-p DFIGNNESPRKKFPP 0.260386657049657 0.00691569448157661 -0.209 -0.554666666666667 11.0832491346878 30.9701135167787 -0.209 -0.554666666666667 0.0779246905901756 0.000799813349049124 -2.17070033007331 -6.72168906916556 Q15032 R3HDM1 Q15032.2.S143.p_R3HDM1 Q15032-2_S143s _1_1_143_143 Q15032-2 Q15032-3|Q15032-4|Q15032-2 Isoform 2 of R3H domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.33035.33035.4 19.23 15.48 99 1 1 1 0 635.8361 2460.3499 S143s TMT10 130 (K) LEQEILDFIGNNEsPRK (K) LEQEILDFIGNNES(1.0)PRK K:TMT10,s:Phosphorylated S R3HDM1 108331.2 4 13 761.2 230.16 HUMAN 1 -11.0832 -30.9701 DFKSEPVSPQDFSFS-p P48552;S807-p DFKSEPVSPQDFSFS 0.139286671509888 0.027268123354085 -0.262 -0.288333333333333 17.5201132229351 21.218018904949 -0.262 -0.288333333333333 0.0177006281121504 0.00755436752125114 -3.36578822381924 -4.14118429318986 P48552 NRIP1 P48552.S807.p_NRIP1 P48552_S807s _1_1_807_807 P48552 P48552 Nuclear receptor-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28136.28136.5 19.18 15.46 1.829 6 1 1 0 693.5587 3383.7978 S807s TMT10 791 (R) SAPALPVSEDFKSEPVsPQDFSFSK (N) S(0.0)APALPVS(0.0)EDFKS(0.0)EPVS(0.99)PQDFS(0.0)FS(0.0)K K:TMT10,s:Phosphorylated S NRIP1 127738.5 5 9 807.1 221.77 HUMAN 1 -17.5201 -21.218 DFKVFRYSTSLEKHK-p Q15020;S795-p DFKVFRYSTSLEKHK 0.757201638201782 0.0474461792514769 0.0596666666666667 -0.238 2.31281904490742 17.7086979311523 0.0596666666666667 -0.238 0.587108131598173 0.016948458601412 0.577015300526651 -3.40082193106698 Q15020 SART3 Q15020.S795.p_SART3 Q15020_S795s _1_1_795_795 Q15020 Q15020 Squamous cell carcinoma antigen recognized by T-cells 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17508.17508.3 12.24 12.24 1.103 4 1 1 0 589.9869 1687.9783 S795s TMT10 791 (K) VFRYsTSLEK (H) VFRY(0.0)S(0.99)T(0.0)S(0.0)LEK K:TMT10,s:Phosphorylated S SART3 110788.4 1 4 2466.1 82.09 HUMAN 1 2.3128 -17.7087 DFKVKTISVDGNKAK-p Q9NP72-2;S51-p DFKVKTISVDGNKAK 0.250689107676978 0.010893084594687 -0.165333333333333 -0.573333333333333 11.4645189805421 27.4996651294974 -0.165333333333333 -0.573333333333333 0.0713753255215331 0.0017784165327295 -2.23769897342472 -5.69796231073019 Q9NP72 RAB18 Q9NP72.2.S51.p_RAB18 Q9NP72-2_S51s _1_1_51_51 Q9NP72-2 Q9NP72-2 Isoform 2 of Ras-related protein Rab-18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11553.11553.2 8.45 8.45 8.448 2 1 1 0 686.3691 1291.7622 S51s TMT10 49 (K) TIsVDGNK (A) T(0.0)IS(0.99)VDGNK K:TMT10,s:Phosphorylated S RAB18 26694.9 1 2 3683.1 45.44 HUMAN 1 -11.4645 -27.4997 DFLAANESRVRTETR-p Q9Y2U8;S728-p DFLAANESRVRTETR 0.351485099137188 0.0290626162798706 0.148666666666667 0.313666666666667 8.4383739093235 20.8031783873765 0.148666666666667 0.313666666666667 0.143272424120976 0.00831155266866164 1.71113488581916 4.049495763134 Q9Y2U8 LEMD3 Q9Y2U8.S728.p_LEMD3 Q9Y2U8_S728s _1_1_728_728 Q9Y2U8 Q9Y2U8 Inner nuclear membrane protein Man1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17923.17923.3 12.49 12.04 99 1 1 1 0 586.3038 1676.9281 S728s TMT10 719 (R) AVDFLAANEsRVR (T) AVDFLAANES(1.0)RVR s:Phosphorylated S LEMD3 100851.5 1 15 412.1 321.94 HUMAN 1 8.4384 20.8032 DFLDLAESPNASDTE-p Q6IC98;S24-p DFLDLAESPNASDTE 0.280584994715465 0.171278733310049 0.159666666666667 0.238333333333333 10.4325568948946 10.0753098020149 0.159666666666667 0.238333333333333 0.090519951066453 0.0982808762278477 2.05697092241586 1.99398424103616 Q6IC98 GRAMD4 Q6IC98.S24.p_GRAMD4 Q6IC98_S24s _1_1_24_24 Q6IC98 Q6IC98 GRAM domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28870.28870.4 22.14 22.14 6.051 4 1 1 0 893.6779 3491.7252 S24s TMT10 16 (R) DDFLDLAEsPNASDTECSDEIPLKVPR (T) DDFLDLAES(0.99)PNAS(0.0)DT(0.0)ECS(0.0)DEIPLKVPR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GRAMD4 66806.3 3 1 1562.1 131.36 HUMAN 1 10.4326 10.0753 DFLLDALSEDFSGPQ-p P20810-6;S599-p DFLLDALSEDFSGPQ 0.426095734478831 0.00601973872309774 -0.263666666666667 0.519666666666667 6.82503365688757 32.0705675354961 -0.263666666666667 0.519666666666667 0.207728762697819 0.000620787904441974 -1.43035016695993 7.07544011980792 P20810 CAST P20810.6.S599.p_CAST P20810-6_S599s _1_1_599_599 P20810-6 P20810|P20810-2|B7Z574|E7EVY3|P20810-8|E9PCH5|P20810-4|E9PDE4|P20810-3|E7EQA0|A0A0A0MR45|E7EQ12|P20810-6|P20810-7|P20810-10|P20810-5|A0A0C4DGB5|P20810-9 Isoform 6 of Calpastatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36623.36623.3 23.51 23.51 2.258 5 1 1 0 1235.2676 3623.8191 S599s TMT10 584 (K) EQLPPMSEDFLLDALsEDFSGPQNASSLK (F) EQLPPMS(0.0)EDFLLDALS(0.99)EDFS(0.0)GPQNAS(0.0)S(0.0)LK K:TMT10,s:Phosphorylated S CAST 85340.8 3 15 314.1 369.19 HUMAN 1 -6.825 32.0706 DFNRTPGSRQASPTE-p Q8TB72;S178-p DFNRTPGSRQASPTE 0.616527641103495 0.782943285556386 0.104666666666667 -0.0443333333333333 3.89713465798702 1.47136752834373 0.104666666666667 -0.0443333333333333 0.407649143522576 0.712628598710047 0.897415053204437 -0.388225675616408 Q8TB72 PUM2 Q8TB72.S178.p_PUM2 Q8TB72_S178s _1_1_178_178 Q8TB72 Q8TB72|Q8TB72-3|Q8TB72-4|Q8TB72-2|A0A0A0MR59 Pumilio homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4644.4644.3 9.29 9.29 1.657 2 1 1 0 453.5523 1278.6752 S178s TMT10 171 (K) DFNRTPGsR (Q) DFNRT(0.0)PGS(0.99)R s:Phosphorylated S PUM2 114784.2 1 6 944.1 197.75 HUMAN 1 3.8971 -1.4714 DFNYRSFSLEGLTGG-p Q12802-2;S1606-p DFNYRSFSLEGLTGG 0.964020217628678 0.0582473000007303 0.007 0.276666666666667 0.307106532788122 16.4515952316457 0.007 0.276666666666667 0.931728428547824 0.0226381262102801 0.0897313554086381 3.15308237765641 Q12802 AKAP13 Q12802.2.S1606.p_AKAP13 Q12802-2_S1606s _1_1_1606_1606 Q12802-2 Q12802-4|A8MYJ1|A0A087WTD7|Q12802-2 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25728.25728.3 12.34 12.34 1.176 8 1 1 0 1230.2913 3608.8808 S1606s TMT10 1604 (R) SFsLEGLTGGAGVGNKPSSSLEVSSANAEELR (H) S(0.0)FS(0.99)LEGLT(0.0)GGAGVGNKPS(0.0)S(0.0)S(0.0)LEVS(0.0)S(0.0)ANAEELR K:TMT10,s:Phosphorylated S AKAP13 310921 4 13 66.1 683.25 HUMAN 1 0.3071 16.4516 DFQKNIYSEELRETK-p P02545;S212-p DFQKNIYSEELRETK 0.188546819611632 0.0596176218583099 -0.278666666666667 0.384 14.2188017653725 16.3154072498955 -0.278666666666667 0.384 0.0378547012839081 0.0233592704563647 -2.73318003794888 3.1267249183081 P02545 LMNA P02545.S212.p_LMNA P02545_S212s _1_1_212_212 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14816.14816.3 12.52 12.52 5.214 3 1 1 0 640.6669 1840.0217 S212s TMT10 209 (K) NIYsEELRETK (R) NIY(0.0)S(0.99)EELRET(0.0)K K:TMT10,s:Phosphorylated S LMNA 74423.5 3 12 60.1 706.83 HUMAN 1 -14.2188 16.3154 DFRDLRDSRDFRDQR-p Q9HCD5;S96-p DFRDLRDSRDFRDQR 0.390105099545893 0.787283305048078 -0.266666666666667 0.032 7.55990708863313 1.44254739381586 -0.266666666666667 0.032 0.175391802411862 0.717373385950985 -1.5587089690846 0.381437218967546 Q9HCD5 NCOA5 Q9HCD5.S96.p_NCOA5 Q9HCD5_S96s _1_1_96_96 Q9HCD5 Q9HCD5 Nuclear receptor coactivator 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8041.8041.5 15.79 15.7 15.789 2 1 1 0 533.849 2585.2476 S96s TMT10 92 (R) DLRDsRDFRDQRDPMYDR (Y) DLRDS(0.99)RDFRDQRDPMY(0.0)DR s:Phosphorylated S NCOA5 65763.5 5 8 426.1 319.02 HUMAN 1 -7.5599 1.4425 DFRKLWKTPPREKAG-p Q86XL3;T541-p DFRKLWKTPPREKAG 0.460871039159184 0.00110621338012195 -0.108 -1.083 6.20300484121052 49.7761570623462 -0.108 -1.083 0.23971737639355 1.05289313433607e-05 -1.32064773650207 -15.5409117281488 Q86XL3 ANKLE2 Q86XL3.T541.p_ANKLE2 Q86XL3_T541t _1_1_541_541 Q86XL3 Q86XL3|Q86XL3-2 Ankyrin repeat and LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13433.13433.4 9.77 6.69 99 1 1 1 0 481.2852 1842.1569 T541t TMT10 538 (K) LWKtPPREK (A) LWKT(1.0)PPREK K:TMT10,t:Phosphorylated T ANKLE2 104968.3 4 6 897.1 204.02 HUMAN 1 -6.203 -49.7762 DFRKRRKSEPAVGPP-p O94875-12;S417-p DFRKRRKSEPAVGPP 0.193883926313618 0.00313569181156438 0.339 0.686 13.9060758490028 37.6120281419086 0.339 0.686 0.040681074479 0.000173299450563549 2.67569000867255 9.107453809566 O94875 SORBS2 O94875.12.S417.p_SORBS2 O94875-12_S417s _1_1_417_417 O94875-12 O94875-11|O94875-7|O94875-10|O94875-12|O94875-4|O94875-2|O94875-8|O94875-3|O94875-5|O94875-9 Isoform 12 of Sorbin and SH3 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4529.4529.3 9.9 9.9 99 1 1 1 0 501.6068 1422.8379 S417s Hydrogen 415 (R) RKsEPAVGPPR (G) RKS(1.0)EPAVGPPR K:TMT10-Lys-Only,s:Phosphorylated S SORBS2 81021.6 4 8 962.1 194.05 HUMAN 1 13.9061 37.612 DFRSGSPSDNSGAEE-p P31749;S126-p DFRSGSPSDNSGAEE 0.625622397019659 0.0822101506802639 -0.0786666666666667 0.215 3.78396654550363 14.3796566013519 -0.0786666666666667 0.215 0.418411242653161 0.0364782789328544 -0.87560262517723 2.76118346247218 P31749 AKT1 P31749.S126.p_AKT1 P31749_S126sS129s_2_2_126_129 P31749 P31749|P31749-2 RAC-alpha serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20046.20046.4 14.45 14.45 1.713 5 2 2 0 742.606 2807.47 S126s S129s TMT10 122 (R) SGSPsDNsGAEEMEVSLAKPK (H) S(0.0)GS(0.0)PS(0.99)DNS(0.99)GAEEMEVS(0.0)LAKPK K:TMT10,s:Phosphorylated S AKT1 56084.8 23 6 1794.1 114.3 HUMAN 1 -3.784 14.3797 DFRTYRLSLLEEYGC-p P53350;S565-p DFRTYRLSLLEEYGC 0.110797206263992 0.00397968849257063 -0.360333333333333 -1.033 19.996012820136 35.3844883888263 -0.360333333333333 -1.033 0.0100091850365815 0.000289435075968215 -3.87809472809444 -8.23683952154623 P53350 PLK1 P53350.S565.p_PLK1 P53350_S565s _1_1_565_565 P53350 P53350 Serine/threonine-protein kinase PLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23670.23670.3 9.88 9.88 9.877 4 1 1 0 777.3826 2250.1663 S565s TMT10 561 (R) TYRLsLLEEYGCCK (E) T(0.0)Y(0.0)RLS(0.99)LLEEY(0.0)GCCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PLK1 68995.2 1 2 2769.1 71.24 HUMAN 1 -19.996 -35.3845 DFSGAEISGNYTKGG-p Q8WVJ2;S142-p DFSGAEISGNYTKGG 0.873152286137269 0.084895509806555 -0.0293333333333333 0.196 1.15273409745633 14.1778429815963 -0.0293333333333333 0.196 0.766878549579699 0.038213401892201 -0.311763246537631 2.72397028778849 Q8WVJ2 NUDCD2 Q8WVJ2.S142.p_NUDCD2 Q8WVJ2_S142s _1_1_142_142 Q8WVJ2 Q8WVJ2|E5RFP0 NudC domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22631.22631.3 15.45 15.45 3.516 4 1 1 0 824.3884 2391.1869 S142s TMT10 130 (K) ENPGFDFSGAEIsGNYTK (G) ENPGFDFS(0.0)GAEIS(0.99)GNY(0.0)T(0.0)K K:TMT10,s:Phosphorylated S NUDCD2 17846.7 1 2 3237.1 56.21 HUMAN 1 -1.1527 14.1778 DFVPSDASPPKTKTS-p P11388-2;S1380-p DFVPSDASPPKTKTS 0.911465612820984 0.819502386482039 -0.0513333333333334 0.0583333333333334 0.788836503896589 1.20969461638522 -0.0513333333333334 0.0583333333333334 0.833904561796562 0.756886115243909 -0.220037957275476 0.325648365240216 P11388 TOP2A P11388.2.S1380.p_TOP2A P11388-2_S1377sS1380s_2_2_1377_1380 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17072.17072.3 12.83 12.83 5.694 4 2 2 0 899.4337 2536.3386 S1377s S1380s TMT10 1369 (K) TDDEDFVPsDAsPPKTK (T) T(0.0)DDEDFVPS(0.99)DAS(0.99)PPKT(0.0)K K:TMT10,s:Phosphorylated S TOP2A 178239.3 1 20 71.2 658.36 HUMAN 1 -0.7888 1.2097 DGAESEWTDVETRCS-p Q02241;T927-p DGAESEWTDVETRCS 0.848749267712848 0.292086677377514 -0.027 0.147 1.37679720216746 7.0546772671934 -0.027 0.147 0.728316719323167 0.197029961863254 -0.365894820148377 1.47017146567357 Q02241 KIF23 Q02241.T927.p_KIF23 Q02241_S924sT927t_2_2_924_927 Q02241 Q02241|H7BYN4|Q02241-2|Q02241-3 Kinesin-like protein KIF23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18050.18050.3 17.05 17.05 4.829 6 2 2 0 908.0505 2562.2157 S924s T927t TMT10 911 (R) SSTVAPAQPDGAEsEWtDVETR (C) S(0.0)S(0.0)T(0.0)VAPAQPDGAES(0.99)EWT(0.99)DVET(0.0)R s:Phosphorylated S,t:Phosphorylated T KIF23 111083.9 1 20 352.1 350.35 HUMAN 1 -1.3768 7.0547 DGAGVRASDLEDEES-p E7ERS3;S46-p DGAGVRASDLEDEES 0.711188084071652 0.524614984346698 0.127 0.112 2.78359132447572 3.76486833916027 0.127 0.112 0.526794057856196 0.420255267954954 0.676103731953981 0.87176701935443 E7ERS3 ZC3H18 E7ERS3.S46.p_ZC3H18 E7ERS3_S46s _1_1_46_46 E7ERS3 E7ERS3|Q86VM9|Q86VM9-2 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.10225.10225.2 10.79 10.79 3.355 2 1 1 0 801.3502 1521.723 S46s TMT10 45 (R) AsDLEDEESAAR (G) AS(0.99)DLEDEES(0.0)AAR s:Phosphorylated S ZC3H18 109165.8 2 2 157.1 499.97 HUMAN 1 2.7836 3.7649 DGALLAITPPAVKRR-p Q6ZRS2;T2852-p DGALLAITPPAVKRR 0.708111337937476 0.336036140909387 -0.0586666666666667 -0.106666666666667 2.81734751672055 6.27552988474482 -0.0586666666666667 -0.106666666666667 0.522715343500784 0.235747454183294 -0.683062907556121 -1.33317121611373 Q6ZRS2 SRCAP Q6ZRS2.T2852.p_SRCAP Q6ZRS2_T2852t _1_1_2852_2852 Q6ZRS2 Q6ZRS2|Q6ZRS2-2|Q6ZRS2-3 Helicase SRCAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26428.26428.4 15.52 15.52 2.423 3 1 1 0 802.9329 3128.7356 T2852t TMT10 2830 (R) HIELGVTGGGSPENGDGALLAItPPAVK (R) HIELGVT(0.0)GGGS(0.0)PENGDGALLAIT(0.99)PPAVK K:TMT10,t:Phosphorylated T SRCAP 345203 1 15 219.1 428.72 HUMAN 1 -2.8173 -6.2755 DGASEEQSQNDEDNQ-p Q92552-2;S315-p DGASEEQSQNDEDNQ 0.578036669021413 0.0125557733612715 -0.0833333333333333 0.379333333333333 4.38042359559053 26.5157883169515 -0.0833333333333334 0.379333333333333 0.364718371841158 0.00223059728010622 -0.98918458166475 5.43089008612503 Q92552 MRPS27 Q92552.2.S315.p_MRPS27 Q92552-2_S315s_1_1_315_315 Q92552-2 Q92552-2|G5EA06 Isoform 2 of 28S ribosomal protein S27, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10261.10261.3 22.14 22.14 3.781 5 1 1 0 1017.1203 2968.3656 S315s N317n TMT10 303 (K) ALTSADGASEEQsQnDEDNQGSEK (L) ALT(0.0)S(0.0)ADGAS(0.0)EEQS(0.99)QN(0.99)DEDN(0.0)QGS(0.0)EK K:TMT10,s:Phosphorylated S,n:Deamidated MRPS27 49548.5 2 1 5176.1 22.14 HUMAN 1 -4.3804 26.5158 DGASPPASPSIIPRL-p Q02779;S506-p DGASPPASPSIIPRL 0.657493781284077 0.34914169115162 0.083 -0.109666666666667 3.41548054471428 6.05907727576651 0.083 -0.109666666666667 0.455461786754127 0.247794847929574 0.803608401415662 -1.29477002607263 Q02779 MAP3K10 Q02779.S506.p_MAP3K10 Q02779_S502sS506s_2_2_502_506 Q02779 Q02779 Mitogen-activated protein kinase kinase kinase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12788.12788.3 7.75 7.75 1.357 4 2 2 0 804.4138 2251.2923 S502s S506s TMT10 495 (K) RKGSDGAsPPAsPSIIPR (L) RKGS(0.0)DGAS(0.99)PPAS(0.99)PS(0.0)IIPR K:TMT10,s:Phosphorylated S MAP3K10 104434.3 1 3 4708.1 27.66 HUMAN 1 3.4155 -6.0591 DGDASPPSPARWSLG-p F8W8D3;S23-p DGDASPPSPARWSLG 0.934605698058103 0.0588325997240103 0.0293333333333333 -0.276666666666667 0.577859958419279 16.3914638138514 0.0293333333333333 -0.276666666666667 0.875415040915775 0.0229537484877688 0.164357084620727 -3.14143357836695 F8W8D3 NotFound F8W8D3.S23.p_NotFound F8W8D3_S23s _1_1_23_23 F8W8D3 F8W8D3|Q14493|E7EUV9 Histone RNA hairpin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5622.5622.3 15 15 4.036 2 1 1 0 513.5558 1458.6845 S23s TMT10 15 (R) CDGDASPPsPAR (W) CDGDAS(0.0)PPS(0.99)PAR C:Carbamidomethylation,s:Phosphorylated S SLBP 32379.3 1 3 2635.1 75.75 HUMAN 1 0.5779 -16.3915 DGDELDFSPPRCLEG-p O14559;S727-p DGDELDFSPPRCLEG 0.553842218497382 0.0155564493341751 -0.106 -0.408 4.73705911193499 24.996051812862 -0.106 -0.408 0.335965040831177 0.00316515380560082 -1.05564480938487 -5.03649200931174 O14559 ARHGAP33 O14559.S727.p_ARHGAP33 O14559_S727s _1_1_727_727 O14559 O14559|O14559-10 Rho GTPase-activating protein 33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.29412.29412.3 15.36 9.94 6.772 3 1 1 0 986.7929 2878.3879 S727s TMT10 714 (R) TSAWLDDGDELDFsPPRCLEGLR (G) T(0.0)S(0.0)AWLDDGDELDFS(0.99)PPRCLEGLR C:Carbamidomethylation,s:Phosphorylated S ARHGAP33 138523 1 2 3099.1 60.69 HUMAN 1 -4.7371 -24.9961 DGDQNHQSGSEKEDT-p Q9H0K6;S103-p DGDQNHQSGSEKEDT 0.597792385463868 0.161937085407441 -0.0743333333333333 -0.222333333333333 4.12731146228818 10.3967450050334 -0.0743333333333333 -0.222333333333333 0.386606234936784 0.0912694638841803 -0.941388396180735 -2.04986458824426 Q9H0K6 PUS7L Q9H0K6.S103.p_PUS7L Q9H0K6_S103s _1_1_103_103 Q9H0K6 Q9H0K6|F8VZA0 Pseudouridylate synthase 7 homolog-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11571.11571.5 12.87 12.87 1.267 7 1 1 0 831.6006 4074.0016 S103s TMT10 94 (K) YTDGDQNHQsGSEKEDTIVDGTSKCEEK (A) Y(0.0)T(0.0)DGDQNHQS(0.99)GS(0.0)EKEDT(0.0)IVDGT(0.0)S(0.0)KCEEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PUS7L 81440.7 1 1 5239.1 21.44 HUMAN 1 -4.1273 -10.3967 DGDSASRSFNTSESK-p Q96S38;S644-p DGDSASRSFNTSESK 0.247048592039774 0.119382866548261 0.182 0.18 11.5997569088082 12.1736267406541 0.182 0.18 0.0691869696421822 0.0606229862924751 2.2615370948634 2.36197085007377 Q96S38 RPS6KC1 Q96S38.S644.p_RPS6KC1 Q96S38_S644s _1_1_644_644 Q96S38 Q96S38|Q96S38-2|F6RJM5|F5H7T0|A0A087X1U5 Ribosomal protein S6 kinase delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14880.14880.3 12.11 12.11 3.241 4 1 1 0 647.6647 1861.0108 S644s Hydrogen 644 (R) sFNTSESKVEFK (A) S(0.99)FNT(0.0)S(0.0)ES(0.0)KVEFK K:TMT10-Lys-Only,s:Phosphorylated S RPS6KC1 119593.1 2 17 253.1 405.38 HUMAN 1 11.5998 12.1736 DGDSDGDSDDEEGYF-p O00418;S31-p DGDSDGDSDDEEGYF 0.858927631567306 0.0197263100945659 0.031 0.395666666666667 1.28811767302472 23.3960079847566 0.031 0.395666666666667 0.743341248391179 0.00457508536173023 0.344666061282738 4.64335562908078 O00418 EEF2K O00418.S31.p_EEF2K O00418_S31s_1_1_31_31 O00418 O00418|H3BRH4 Eukaryotic elongation factor 2 kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20453.20453.4 21.47 21.47 1.195 7 1 1 0 1074.9578 4215.8209 S31s N49n TMT10 21 (R) AGHDGDSDGDsDDEEGYFICPITDDPSSnQNVNSK (V) AGHDGDS(0.0)DGDS(0.99)DDEEGY(0.0)FICPIT(0.0)DDPS(0.0)S(0.0)N(0.99)QN(0.0)VN(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated EEF2K 82713.2 1 2 995.1 190.99 HUMAN 1 1.2881 23.396 DGDVKCLSEKDTYDT-p Q96JN0-3;S784-p DGDVKCLSEKDTYDT 0.478270541555373 0.196635194216746 -0.0933333333333333 0.132666666666667 5.89517758545044 9.29134389978179 -0.0933333333333334 0.132666666666667 0.257325154057547 0.117724162636902 -1.26586776954356 1.85811616853626 Q96JN0 LCOR Q96JN0.3.S784.p_LCOR Q96JN0-3_S784s _1_1_784_784 Q96JN0-3 Q96JN0-3|A0A1P0AZG4 Isoform 3 of Ligand-dependent corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25075.25075.4 10.37 10.37 1.133 6 1 1 0 811.3951 3162.5967 S784s TMT10 782 (K) CLsEKDTYDTSIDSLEENLDK (K) CLS(0.99)EKDT(0.0)Y(0.0)DT(0.0)S(0.0)IDS(0.0)LEENLDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LCOR 172300.7 1 11 673.1 247.79 HUMAN 1 -5.8952 9.2913 DGEDKPPTPGQPVDE-p Q8WVC0;T333-p DGEDKPPTPGQPVDE 0.301521739165381 0.0198490672400033 -0.279333333333333 0.787 9.77140301173351 23.3504028757293 -0.279333333333333 0.787 0.105404632603544 0.00462338130352067 -1.94202132415426 4.63246351749387 Q8WVC0 LEO1 Q8WVC0.T333.p_LEO1 Q8WVC0_T333t_1_1_333_333 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25044.25044.4 23.82 20.42 1.891 7 1 1 0 1477.661 5826.6725 T333t N341n TMT10 307 (K) DNSGTMDLFGGADDISSGSDGEDKPPtPGQPVDEnGLPQDQQEEEPIPETR (I) DN(0.0)S(0.0)GT(0.0)MDLFGGADDIS(0.0)S(0.0)GS(0.0)DGEDKPPT(0.99)PGQPVDEN(0.99)GLPQDQQEEEPIPET(0.0)R K:TMT10,t:Phosphorylated T,n:Deamidated LEO1 75516.9 3 9 514.1 286.88 HUMAN 1 -9.7714 23.3504 DGEEDEVSAGEKEQD-p Q9BXW9;S1435-p DGEEDEVSAGEKEQD 0.0904989301263926 0.0506792864412714 -0.612333333333333 0.514 22.188385646635 17.3038584931727 -0.612333333333333 0.514 0.00604173170045331 0.0186043349839329 -4.36514173934496 3.32013736499284 Q9BXW9 FANCD2 Q9BXW9.S1435.p_FANCD2 Q9BXW9_S1435s _1_1_1435_1435 Q9BXW9 Q9BXW9 Fanconi anemia group D2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8318.8318.3 19.45 19.45 19.451 3 1 1 0 850.0786 2468.2607 S1435s TMT10 1423 (K) SKATEDGEEDEVsAGEK (E) S(0.0)KAT(0.0)EDGEEDEVS(0.99)AGEK K:TMT10,s:Phosphorylated S FANCD2 165894.1 1 9 960.1 194.41 HUMAN 1 -22.1884 17.3039 DGEEDGSSDQSQASG-p Q9UNF1;S191-p DGEEDGSSDQSQASG 0.711521841112661 0.0980923575295458 -0.0611666666666667 0.278666666666667 2.77913375804612 13.329964275984 -0.0611666666666667 0.278666666666667 0.527335032958456 0.0464519096229016 -0.675183398430449 2.56924557087286 Q9UNF1 MAGED2 Q9UNF1.S191.p_MAGED2 Q9UNF1_S190sS191s_2_2_190_191 Q9UNF1 Q9UNF1|Q9UNF1-2|Q5H909|Q5H907 Melanoma-associated antigen D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5684.5907.3 21.7 21.7 3.087 6 2 2 0 860.6758 2420.0759 S190s S191s TMT10 182 (K) HLDGEEDGssDQSQASGTTGGR (R) HLDGEEDGS(0.99)S(0.99)DQS(0.0)QAS(0.0)GT(0.0)T(0.0)GGR s:Phosphorylated S MAGED2 65124.3 8 14 893.1 204.33 HUMAN 2 -2.7791 13.33 DGEGGAYTDNELDEP-p A0A1B0GTW1;T992-p DGEGGAYTDNELDEP 0.862732972857371 0.650860631661276 -0.028 0.052 1.25079039033891 2.54583827920047 -0.028 0.052 0.749757745428021 0.556437219868392 -0.335655135590784 0.626474090410583 A0A1B0GTW1 NotFound A0A1B0GTW1.T992.p_NotFound A0A1B0GTW1_T992t _1_1_992_992 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32969.32969.3 25.67 25.67 1.11 7 1 1 0 1331.9342 3913.8188 T992t TMT10 977 (R) LISDFEDTDGEGGAYtDNELDEPAEEPLVSSITR (S) LIS(0.0)DFEDT(0.0)DGEGGAY(0.0)T(0.99)DNELDEPAEEPLVS(0.0)S(0.0)IT(0.0)R t:Phosphorylated T TJP2 141123.7 4 23 41.1 827.72 HUMAN 1 -1.2508 2.5458 DGEKGRDSGEEAHDY-p Q96G01;S399-p DGEKGRDSGEEAHDY 0.91441604787678 0.434540295570468 -0.0186666666666667 -0.0833333333333333 0.76099632872855 4.82324154395202 -0.0186666666666667 -0.0833333333333333 0.839267425433511 0.329363785560154 -0.212803419446229 -1.0713543069043 Q96G01 BICD1 Q96G01.S399.p_BICD1 Q96G01_S399s _1_1_399_399 Q96G01 Q96G01|Q96G01-3|Q96G01-4 Protein bicaudal D homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24970.24970.4 22.49 21.31 7.097 2 1 1 0 822.3902 3206.5676 S399s TMT10 396 (K) GRDsGEEAHDYEVDINGLEILECK (Y) GRDS(0.99)GEEAHDY(0.0)EVDINGLEILECK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BICD1 111318.5 1 1 3561.1 48.23 HUMAN 1 -0.761 -4.8232 DGERSAESPVLVVTR-p Q9C0G0;S1262-p DGERSAESPVLVVTR 0.931970571874728 0.0354374946407432 -0.013 0.426333333333333 0.607319171054551 19.525785864615 -0.013 0.426333333333333 0.869496989963005 0.0111537630349969 -0.172254106515281 3.774484372724 Q9C0G0 ZNF407 Q9C0G0.S1262.p_ZNF407 Q9C0G0_S1262s _1_1_1262_1262 Q9C0G0 Q9C0G0|Q9C0G0-2|Q9C0G0-3 Zinc finger protein 407 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15506.15506.2 12.66 12.66 3.209 3 1 1 0 733.8953 1386.8154 S1262s TMT10 1259 (R) SAEsPVLVVTR (I) S(0.0)AES(0.99)PVLVVT(0.0)R s:Phosphorylated S ZNF407 251813.1 1 4 2917.1 66.03 HUMAN 1 -0.6073 19.5258 DGERSVLSEVNSKTD-p Q9HCS5;S614-p DGERSVLSEVNSKTD 0.527192383862172 0.0721929565362957 0.124 0.234 5.14601864498215 15.1690095821599 0.124 0.234 0.305772296835024 0.0304157858508087 1.13075068807273 2.90828551123819 Q9HCS5 EPB41L4A Q9HCS5.S614.p_EPB41L4A Q9HCS5_S614s _1_1_614_614 Q9HCS5 Q9HCS5 Band 4.1-like protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29320.29320.3 17.41 10.53 1.608 5 1 1 0 820.7831 2380.3649 S614s Hydrogen 611 (R) SVLsEVNSKTDLVPPLPVTR (S) S(0.0)VLS(0.99)EVNS(0.0)KT(0.0)DLVPPLPVT(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S EPB41L4A 79741.9 1 12 696.1 241.4 HUMAN 1 5.146 15.169 DGETLEGSDAEESLD-p Q9P2D1;S2956-p DGETLEGSDAEESLD 0.134264480831341 0.0245643277209187 -0.477666666666667 0.493666666666667 17.9322745405435 21.9102133498373 -0.477666666666667 0.493666666666667 0.0160980230886918 0.00644137621080813 -3.44857193388889 4.29690758894354 Q9P2D1 CHD7 Q9P2D1.S2956.p_CHD7 Q9P2D1_S2956s _1_1_2956_2956 Q9P2D1 Q9P2D1|Q9P2D1-3|Q9P2D1-4 Chromodomain-helicase-DNA-binding protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18807.18807.3 22.09 19.33 2.799 3 1 1 0 1050.1729 3068.5515 S2956s TMT10 2942 (K) AEGGPFKDGETLEGsDAEESLDK (T) AEGGPFKDGET(0.0)LEGS(0.99)DAEES(0.0)LDK K:TMT10,s:Phosphorylated S CHD7 337747 7 14 256.1 399.25 HUMAN 1 -17.9323 21.9102 DGGGRAASVPCSVAP-p Q9C073;S67-p DGGGRAASVPCSVAP 0.134077347077856 0.0208656908576448 0.281333333333333 0.376 17.9685681621492 22.9853469793355 0.281333333333333 0.376 0.0159640538392305 0.00502881086588877 3.45590689564768 4.54587716480445 Q9C073 FAM117A Q9C073.S67.p_FAM117A Q9C073_S67s _1_1_67_67 Q9C073 Q9C073 Protein FAM117A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13208.13208.2 14.12 13.39 1.469 2 1 1 0 877.4527 1673.9297 S67s TMT10 65 (R) AAsVPCSVAPEK (S) AAS(0.99)VPCS(0.0)VAPEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM117A 49059.4 2 2 640.1 255.25 HUMAN 1 17.9686 22.9853 DGHMKVFSLIQQAVT-p Q8TEW0;S25-p DGHMKVFSLIQQAVT 0.182722695333724 NA -0.5645 NaN 14.5216773150571 NA -0.5645 NA 0.0353046791115526 NA -2.99884208405351 NA Q8TEW0 PARD3 Q8TEW0.S25.p_PARD3 Q8TEW0_S25s _1_1_25_25 Q8TEW0 Q8TEW0|Q8TEW0-2 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.35136.35136.3 9.75 8.54 6.959 2 1 1 0 524.2878 1490.8892 S25s TMT10 23 (K) VFsLIQQAVTR (Y) VFS(0.99)LIQQAVT(0.0)R s:Phosphorylated S PARD3 151933.9 1 2 65.1 692.2 HUMAN 1 -14.5217 NA DGHRYSRSPARRGGY-p A0A0A0MQS2;S456-p DGHRYSRSPARRGGY 0.108274227113564 0.129883408820272 0.520666666666667 0.222666666666667 20.2882316406942 11.6836530210353 0.520666666666667 0.222666666666667 0.00935786629975464 0.0678632568038 3.94108284533447 2.27524566271901 A0A0A0MQS2 CLASRP A0A0A0MQS2.S456.p_CLASRP A0A0A0MQS2_S456s _1_1_456_456 A0A0A0MQS2 Q8N2M8|A0A0A0MQS2|F5H0Q6|Q8N2M8-4|Q8N2M8-3 CLK4-associating serine/arginine-rich protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3130.3130.3 12.01 5.46 1.549 3 1 1 0 382.5268 1065.6003 S456s TMT10 453 (R) YSRsPAR (R) Y(0.0)S(0.0)RS(0.99)PAR s:Phosphorylated S CLASRP 77332.1 2 8 1177.1 169.72 HUMAN 1 20.2882 11.6837 DGIPNDSSDSEMEDK-p Q9H6S0;S1090-p DGIPNDSSDSEMEDK 0.362971528924294 0.0422490148223621 -0.224333333333333 0.274666666666667 8.17350676434326 18.4078759841507 -0.224333333333333 0.274666666666667 0.152282263531345 0.0144282082330644 -1.66524668993068 3.54230382402995 Q9H6S0 YTHDC2 Q9H6S0.S1090.p_YTHDC2 Q9H6S0_S1089sS1090s_2_2_1089_1090 Q9H6S0 Q9H6S0 Probable ATP-dependent RNA helicase YTHDC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25038.25038.4 12.34 12.34 1.144 6 2 2 0 939.9261 3596.7427 S1089s S1090s TMT10 1069 (R) LASNALQEPSSFRVDGIPNDssDSEMEDK (T) LAS(0.0)NALQEPS(0.0)S(0.0)FRVDGIPNDS(0.99)S(0.99)DS(0.0)EMEDK K:TMT10,s:Phosphorylated S YTHDC2 161671.9 4 18 668.1 249.65 HUMAN 1 -8.1735 18.4079 DGKAPLATGEDDDDE-p P20290;T182-p DGKAPLATGEDDDDE 0.200797395490016 0.0767253768934635 0.234666666666667 0.212 13.5571686806835 14.7955747590524 0.234666666666667 0.212 0.044084217044497 0.0331468699292956 2.61196715307106 2.83837698126645 P20290 BTF3 P20290.T182.p_BTF3 P20290_T182t _1_1_182_182 P20290 P20290|P20290-2 Transcription factor BTF3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27080.27080.4 12.29 12.29 5.347 3 1 1 0 1126.028 4421.1359 T182t TMT10 172 (K) QSVDGKAPLAtGEDDDDEVPDLVENFDEASKNEAN (-) QS(0.0)VDGKAPLAT(0.99)GEDDDDEVPDLVENFDEAS(0.0)KNEAN K:TMT10,t:Phosphorylated T BTF3 22224.6 1 3 3063.1 61.68 HUMAN 1 13.5572 14.7956 DGKASLVSEEEEDEE-p Q96GN5;S117-p DGKASLVSEEEEDEE 0.08581207963261 0.379698202344696 -0.362666666666667 0.092 22.8296543766547 5.58954535384059 -0.362666666666667 0.092 0.00521236190846408 0.276086686560678 -4.51427283886359 1.2108127879589 Q96GN5 CDCA7L Q96GN5.S117.p_CDCA7L Q96GN5_S117s _1_1_117_117 Q96GN5 Q96GN5|Q96GN5-2|Q96GN5-4|Q96GN5-5 Cell division cycle-associated 7-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15661.15661.3 7.48 7.48 3.769 2 1 1 0 759.3406 2196.0444 S117s TMT10 113 (K) ASLVsEEEEDEEEDK (A) AS(0.0)LVS(0.99)EEEEDEEEDK K:TMT10,s:Phosphorylated S CDCA7L 53118.2 1 2 3714.1 44.69 HUMAN 1 -22.8297 5.5895 DGKESKGSPVFLPRK-p Q9NYV4-2;S423-p DGKESKGSPVFLPRK 0.367137725804172 0.105161022450406 0.14 0.212666666666667 8.07703024831724 12.9225175314487 0.14 0.212666666666667 0.155702998125545 0.0510209154642398 1.64852072147152 2.49575475261461 Q9NYV4 CDK12 Q9NYV4.2.S423.p_CDK12 Q9NYV4-2_S423s _1_1_423_423 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17959.18172.2 14.96 5.98 99 1 1 1 0 591.3181 1101.6618 S423s TMT10 422 (K) GsPVFLPR (K) GS(1.0)PVFLPR s:Phosphorylated S CDK12 163853.1 12 20 59.1 708.76 HUMAN 1 8.077 12.9225 DGKNHAGSPGCEESD-p P42575;S340-p DGKNHAGSPGCEESD 0.472747504381845 0.00292573679022132 -0.160666666666667 -0.892666666666667 5.99570432497851 38.2387022536378 -0.160666666666667 -0.892666666666667 0.25143722070403 0.000150013303400139 -1.28379830231474 -9.3666926480841 P42575 CASP2 P42575.S340.p_CASP2 P42575_S340s _1_1_340_340 P42575 P42575 Caspase-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4741.4741.5 7.37 7.37 2.248 3 1 1 0 711.7149 3474.5828 S340s Hydrogen 322 (R) GDETDRGVDQQDGKNHAGsPGCEESDAGK (E) GDET(0.0)DRGVDQQDGKNHAGS(0.99)PGCEES(0.0)DAGK K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S CASP2 51711.4 1 2 5583.1 17.97 HUMAN 1 -5.9957 -38.2387 DGKVSPGTLSIGSAL-p Q96QT6;T704-p DGKVSPGTLSIGSAL 0.2592179584854 0.169214323928998 0.327 0.177333333333333 11.1373183101104 10.1450153123357 0.327 0.177333333333333 0.0769605511083541 0.0967160316634426 2.18018398033922 2.00609167840078 Q96QT6 PHF12 Q96QT6.T704.p_PHF12 Q96QT6_T704t_1_1_704_704 Q96QT6 Q96QT6|Q96QT6-3|Q96QT6-5|Q96QT6-4 PHD finger protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33210.33210.4 11.21 11.21 1.676 14 1 1 0 1205.6127 4722.4701 T704t N719n M723m TMT10 689 (R) FSSPAPSSDGKVSPGtLSIGSALTVPSFPAnSTAmVDLTNSLR (A) FS(0.0)S(0.0)PAPS(0.0)S(0.0)DGKVS(0.0)PGT(0.99)LS(0.0)IGS(0.0)ALT(0.0)VPS(0.0)FPAN(0.99)S(0.0)T(0.0)AM(1.0)VDLT(0.0)N(0.0)S(0.0)LR K:TMT10,t:Phosphorylated T,n:Deamidated,m:Oxidized methionine PHF12 111750.5 1 12 626.1 258.17 HUMAN 1 11.1373 10.145 DGKVVSETNDTKVLR-p P05783;T422-p DGKVVSETNDTKVLR 0.233121410286087 0.464472433482568 0.432666666666667 -0.122 12.1521528548416 4.44122737151107 0.432666666666667 -0.122 0.0609234816665738 0.35964767977763 2.35935165864791 -1.00040208259672 P05783 KRT18 P05783.T422.p_KRT18 P05783_T422t _1_1_422_422 P05783 P05783 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14989.14989.3 16.96 16.96 1.427 3 1 1 0 758.0842 2192.2741 T422t TMT10 413 (R) IVDGKVVSEtNDTK (V) IVDGKVVS(0.0)ET(0.99)NDT(0.0)K K:TMT10,t:Phosphorylated T KRT18 48057 3 27 89.1 623.62 HUMAN 1 12.1522 -4.4412 DGLEIVVSPRSLHSE-p Q99496;S41-p DGLEIVVSPRSLHSE 0.91263486702512 0.142190493074063 -0.025 -0.18 0.77458647960999 11.1640098560616 -0.025 -0.18 0.836645254470307 0.0764890055131442 -0.216339082971129 -2.18386615413064 Q99496 RNF2 Q99496.S41.p_RNF2 Q99496_S41s _1_1_41_41 Q99496 Q99496|Q99496-2 E3 ubiquitin-protein ligase RING2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28565.28772.3 26.21 26.21 11.96 3 1 1 0 712.0378 2054.1331 S41s TMT10 27 (R) TPQEAITDGLEIVVsPR (S) T(0.0)PQEAIT(0.0)DGLEIVVS(0.99)PR s:Phosphorylated S RNF2 38111.2 3 11 1195.2 167.38 HUMAN 1 -0.7746 -11.164 DGLLALSSPDAEEPQ-p F1T0I1;S2253-p DGLLALSSPDAEEPQ 0.532081809207476 0.542767729972682 0.094 -0.0583333333333333 5.07022172104089 3.57045799558154 0.094 -0.0583333333333333 0.311155747822048 0.439495264974758 1.11691117863197 -0.833946496589577 F1T0I1 SEC16A F1T0I1.S2253.p_SEC16A F1T0I1_S2253s _1_1_2253_2253 F1T0I1 F1T0I1|O15027-5|Q8N9G1 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20800.20800.3 18.26 18.26 1.142 4 1 1 0 987.8126 2881.4489 S2253s TMT10 2242 (R) SGRNDGLLALSsPDAEEPQLPDGTGR (E) S(0.0)GRNDGLLALS(0.0)S(0.99)PDAEEPQLPDGT(0.0)GR s:Phosphorylated S SEC16A 251018 3 1 15.2 1143.82 HUMAN 1 5.0702 -3.5705 DGLLEENSFDPSKIT-p Q13352-5;S56-p DGLLEENSFDPSKIT 0.978588331593317 0.0509387336443387 0.00666666666666666 -0.273666666666667 0.186195569310243 17.2654803573168 0.00666666666666667 -0.273666666666667 0.958032943105229 0.0187694680464012 0.0551040322470655 -3.31253415266366 Q13352 ITGB3BP Q13352.5.S56.p_ITGB3BP Q13352-5_S56s _1_1_56_56 Q13352-5 Q13352-5|Q13352-2|Q13352-3|Q13352-4 Isoform 5 of Centromere protein R HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26969.26969.3 15.87 12.05 6.269 2 1 1 0 701.3538 2022.0796 S56s TMT10 48 (K) LDGLLEENsFDPSK (I) LDGLLEENS(0.99)FDPS(0.0)K K:TMT10,s:Phosphorylated S ITGB3BP 24900.1 1 1 3166.1 58.82 HUMAN 1 0.1862 -17.2655 DGLPLMGSGIDLTKV-p Q9Y3C0;S11-p DGLPLMGSGIDLTKV 0.445014111801817 0.263752336593741 -0.139333333333333 0.110666666666667 6.48090137235339 7.6247947359846 -0.139333333333333 0.110666666666667 0.224858786601592 0.172790764603549 -1.36980536828224 1.56952328403273 Q9Y3C0 CCDC53 Q9Y3C0.S11.p_CCDC53 Q9Y3C0_S11s_1_1_11_11 Q9Y3C0 Q9Y3C0|F5GZ97|F5GXZ7|F5GWI9|F5H2P1|F5GXZ4|F5H0A7 WASH complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32513.32513.3 12.38 12.38 4.208 2 1 1 0 720.3347 2063.0238 M1m S11s Acetyl 1 (-) mDEDGLPLMGsGIDLTK (V) M(0.99)DEDGLPLM(0.0)GS(0.99)GIDLT(0.0)K K:TMT10,m:Oxidized methionine,s:Phosphorylated S WASHC3 21229.4 5 1 4170.1 36.24 HUMAN 1 -6.4809 7.6248 DGLRRAQSTDSLGTS-p Q15276;S407-p DGLRRAQSTDSLGTS 0.175973502111451 0.0851225993721179 0.241333333333333 0.257666666666667 15.002406163647 14.1606236367151 0.241333333333333 0.257666666666667 0.0316052611820281 0.0383652149985449 2.87890246226217 2.72080228936723 Q15276 RABEP1 Q15276.S407.p_RABEP1 Q15276_S407s _1_1_407_407 Q15276 Q15276|Q15276-2 Rab GTPase-binding effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8918.8918.2 8.06 8.06 1.127 7 1 1 0 1131.0806 2181.1875 S407s TMT10 404 (R) RAQsTDSLGTSGSLQSK (A) RAQS(0.99)T(0.0)DS(0.0)LGT(0.0)S(0.0)GS(0.0)LQS(0.0)K K:TMT10,s:Phosphorylated S RABEP1 99688.1 11 3 933.1 198.92 HUMAN 1 15.0024 14.1606 DGMQYYCS_______-p Q8N806;S425-p DGMQYYCS_______ 0.554346998867521 0.719052775587631 -0.0783333333333334 -0.0453333333333333 4.73101781185581 1.97290954009284 -0.0789473836024664 -0.0453333333333333 0.336432713818359 0.634905436749043 -1.05452690802031 -0.502736190621586 Q8N806 UBR7 Q8N806.S425.p_UBR7 Q8N806_S425s _1_1_425_425 Q8N806 Q8N806 Putative E3 ubiquitin-protein ligase UBR7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11831.11831.2 12.61 12.61 5.638 3 1 1 0 794.3301 1507.6871 S425s TMT10 416 (R) RVDGMQYYCs (-) RVDGMQY(0.0)Y(0.0)CS(0.99) C:Carbamidomethylation,s:Phosphorylated S UBR7 49367.3 1 7 1053.1 182.86 HUMAN 1 -4.731 -1.9729 DGNEGPQSPFHHILP-p Q12980;S189-p DGNEGPQSPFHHILP 0.364854537412832 0.570145030030526 0.129666666666667 0.062 8.12760717223694 3.2887550927964 0.129666666666667 0.062 0.15390023492651 0.468947786987528 1.65729005509755 0.778360129028718 Q12980 NPRL3 Q12980.S189.p_NPRL3 Q12980_S189s _1_1_189_189 Q12980 Q12980|B7Z6Q0 GATOR complex protein NPRL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35828.35828.4 21.6 21.6 2.365 2 1 1 0 917.2311 3585.914 S189s TMT10 169 (K) LILALQDEVSAMADGNEGPQsPFHHILPK (C) LILALQDEVS(0.0)AMADGNEGPQS(0.99)PFHHILPK K:TMT10,s:Phosphorylated S NPRL3 64174.4 1 1 3067.1 61.64 HUMAN 1 8.1276 3.2888 DGNIDLESDSFLKFD-p P18583-5;S152-p DGNIDLESDSFLKFD 0.941250546674147 0.655941410954736 -0.0116666666666667 -0.0446666666666667 0.517268604344762 2.50340874525851 -0.0116666666666667 -0.0446666666666666 0.887714143982411 0.561900120816193 -0.14798310831495 -0.617530437079195 P18583 SON P18583.5.S152.p_SON P18583-5_S152s _1_1_152_152 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20075.20498.3 20.71 16.31 1.136 3 1 1 0 777.3699 2250.129 S152s TMT10 142 (K) SHDDGNIDLEsDSFLK (F) S(0.0)HDDGNIDLES(0.99)DS(0.0)FLK K:TMT10,s:Phosphorylated S SON 267429.6 7 6 45.1 778.56 HUMAN 1 -0.5173 -2.5034 DGNNERPSPPPNVDY-p Q9NZ32;S241-p DGNNERPSPPPNVDY 0.875972211552485 0.224471528800999 0.024 0.122333333333333 1.12764404296795 8.54410658514221 0.024 0.122333333333333 0.771321781578928 0.139826453164649 0.305597082204648 1.72885586432137 Q9NZ32 ACTR10 Q9NZ32.S241.p_ACTR10 Q9NZ32_S241s _1_1_241_241 Q9NZ32 Q9NZ32 Actin-related protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21731.21731.4 17.89 17.89 5.217 2 1 1 0 806.3959 3142.5846 S241s TMT10 231 (K) FNIDGNNERPsPPPNVDYPLDGEK (I) FNIDGNNERPS(0.99)PPPNVDY(0.0)PLDGEK K:TMT10,s:Phosphorylated S ACTR10 46876.7 2 1 4871.1 25.61 HUMAN 1 1.1276 8.5441 DGNPRENSPFLNNVE-p A0A0G2JNW7;S50-p DGNPRENSPFLNNVE 0.64009150118223 0.060000849130988 -0.0666666666666667 -0.258333333333333 3.61934157791872 16.2785898980796 -0.0666666666666667 -0.258333333333333 0.434576104081611 0.0235581406420897 -0.843629135538855 -3.11961482263577 A0A0G2JNW7 NotFound A0A0G2JNW7.S50.p_NotFound A0A0G2JNW7_S50s _1_1_50_50 A0A0G2JNW7 Q9Y666|A0A0G2JNW7|Q9Y666-2 Solute carrier family 12 member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30387.30387.3 16.76 16.76 11.469 2 1 1 0 961.1268 2801.4034 S50s TMT10 48 (R) ENsPFLNNVEVEQESFFEGK (N) ENS(0.99)PFLNNVEVEQES(0.0)FFEGK K:TMT10,s:Phosphorylated S SLC12A7 120389 3 2 1247.2 162.14 HUMAN 1 -3.6193 -16.2786 DGNTKQNSIGSYVLQ-p Q8IYH5;S228-p DGNTKQNSIGSYVLQ 0.367025688083901 0.656531830979053 -0.133666666666667 0.0543333333333334 8.08175063143908 2.49697027196104 -0.133666666666667 0.0543333333333334 0.155533855170042 0.562733762988247 -1.6493392577959 0.616170441201715 Q8IYH5 ZZZ3 Q8IYH5.S228.p_ZZZ3 Q8IYH5_S228s _1_1_228_228 Q8IYH5 Q8IYH5|Q8IYH5-2|Q8IYH5-4 ZZ-type zinc finger-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20458.20458.3 11.52 11.52 1.134 3 1 1 0 635.3394 1824.0267 S228s TMT10 226 (K) QNsIGSYVLQEK (S) QNS(0.99)IGS(0.0)Y(0.0)VLQEK K:TMT10,s:Phosphorylated S ZZZ3 103390.7 1 5 1027.1 186.83 HUMAN 1 -8.0818 2.497 DGPARPASPEAGNTL-p Q9UJX6;S314-p DGPARPASPEAGNTL 0.108274227113564 0.0148187336309595 -0.518666666666667 0.366333333333333 20.2777282150842 25.3259145440278 -0.518666666666667 0.366333333333333 0.00938052571852242 0.00293365166600668 -3.93880896734478 5.12029769524496 Q9UJX6 ANAPC2 Q9UJX6.S314.p_ANAPC2 Q9UJX6_S314s _1_1_314_314 Q9UJX6 Q9UJX6|Q9UJX6-2 Anaphase-promoting complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17561.17561.3 17.08 14.78 2.491 2 1 1 0 802.4109 2325.2513 S314s TMT10 303 (K) VFLQDGPARPAsPEAGNTLR (R) VFLQDGPARPAS(0.99)PEAGNT(0.0)LR s:Phosphorylated S ANAPC2 94682.2 2 2 1208.1 166.75 HUMAN 1 -20.2777 25.3259 DGPGLERSPGEPGGA-p Q96EB6;S47-p DGPGLERSPGEPGGA 0.303797156094823 0.0392327496995988 0.155333333333333 0.268666666666667 9.69349677712784 18.8788420981735 0.155333333333333 0.268666666666667 0.10731250241715 0.0129454094173984 1.92850608748047 3.63919741416446 Q96EB6 SIRT1 Q96EB6.S47.p_SIRT1 Q96EB6_S47s _1_1_47_47 Q96EB6 Q96EB6|Q96EB6-2 NAD-dependent protein deacetylase sirtuin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5718.5718.4 18.33 18.33 99 1 1 1 0 579.2842 2234.1475 S47s TMT10 39 (R) RDGPGLERsPGEPGGAAPER (E) RDGPGLERS(1.0)PGEPGGAAPER s:Phosphorylated S SIRT1 82763.6 16 3 475.1 301.26 HUMAN 1 9.6935 18.8788 DGPKNVRSDISDQEE-p E7ETA6;S1757-p DGPKNVRSDISDQEE 0.378389324662461 0.030064728227214 0.153 0.376333333333333 7.79827990408213 20.5955220371969 0.153 0.376333333333333 0.166024434476963 0.00871862094106983 1.60014693273813 4.00404751544395 E7ETA6 PCM1 E7ETA6.S1757.p_PCM1 E7ETA6_S1757s _1_1_1757_1757 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18944.18944.3 19.11 19.11 1.149 5 1 1 0 1158.8713 3394.632 S1757s TMT10 1754 (K) NVRsDISDQEEDEESEGCPVSINLSK (A) NVRS(0.99)DIS(0.0)DQEEDEES(0.0)EGCPVS(0.0)INLS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCM1 229381.8 4 50 13.1 1159.95 HUMAN 1 7.7983 20.5955 DGPPSPRSPVIGSEV-p P29590-8;S530-p DGPPSPRSPVIGSEV 0.724370468581743 0.334904093400976 0.0506666666666667 0.094 2.65074392165213 6.29653718209671 0.0506666666666667 0.094 0.54315728378175 0.23460987158095 0.648535659626847 1.33688913246749 P29590 PML P29590.8.S530.p_PML P29590-8_S518sS527sS530s_3_3_518_530 P29590-8 P29590|P29590-11|P29590-8|P29590-3|P29590-13|P29590-9|P29590-5|P29590-2|P29590-12 Isoform PML-2 of Protein PML HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24112.24325.5 10.08 10.08 0 6 3 3 0 907.0225 4290.1741 S518s S527s S530s N543n TMT10 516 (K) AVsPPHLDGPPsPRsPVIGSEVFLPNSnHVASGAGEAEER (V) AVS(0.99)PPHLDGPPS(0.99)PRS(0.99)PVIGS(0.0)EVFLPN(0.50)S(0.0)N(0.50)HVAS(0.0)GAGEAEER s:Phosphorylated S,n:Deamidated PML 92374.1 2 19 777.1 226.8 HUMAN 1 2.6507 6.2965 DGPSQSESATETAMT-p Q9H9A6;S379-p DGPSQSESATETAMT 0.288933529600576 0.592082207627711 0.160333333333333 -0.0673333333333333 10.1681682262554 3.07997369927195 0.160333333333333 -0.0673333333333333 0.0962017954192248 0.492042515465386 2.01094276564659 -0.73650460685971 Q9H9A6 LRRC40 Q9H9A6.S379.p_LRRC40 Q9H9A6_S379s _1_1_379_379 Q9H9A6 Q9H9A6 Leucine-rich repeat-containing protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16051.16051.3 23.03 23.03 2.235 8 1 1 0 1025.8242 2995.493 S379s TMT10 369 (K) IKDDGPSQSEsATETAMTLPSESR (V) IKDDGPS(0.0)QS(0.0)ES(0.99)AT(0.0)ET(0.0)AMT(0.0)LPS(0.0)ES(0.0)R K:TMT10,s:Phosphorylated S LRRC40 68762.2 1 2 3734.1 44.29 HUMAN 1 10.1682 -3.08 DGQARQPTPPFFGRD-p Q96PK6;T206-p DGQARQPTPPFFGRD 0.276989082993004 0.0367480388793901 0.178 0.343333333333333 10.5460906086364 19.3014031019758 0.178 0.343333333333333 0.0881842324392258 0.0117451803484837 2.07676570909889 3.72726871101271 Q96PK6 RBM14 Q96PK6.T206.p_RBM14 Q96PK6_T206t _1_1_206_206 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28929.28929.5 27.3 24.14 1.572 8 1 1 0 1051.105 5171.5077 T206t TMT10 167 (K) KPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDGQARQPtPPFFGR (D) KPGAGDT(0.0)AFPGT(0.0)GGFS(0.0)AT(0.0)FDY(0.0)QQAFGNS(0.0)T(0.0)GGFDGQARQPT(0.99)PPFFGR K:TMT10,t:Phosphorylated T RBM14 69661.6 44 4 151.1 510.8 HUMAN 1 10.5461 19.3014 DGQPKEQTPEKPRHK-p Q8WW22-2;T22-p DGQPKEQTPEKPRHK 0.219002683591554 0.0016237919479163 0.189666666666667 -0.913333333333333 12.7074163035284 44.5537210750377 0.189666666666667 -0.913333333333334 0.053611550747716 3.50451475233716e-05 2.45847614630966 -12.38221462097 Q8WW22 DNAJA4 Q8WW22.2.T22.p_DNAJA4 Q8WW22-2_T22t _1_1_22_22 Q8WW22-2 Q8WW22-2|F5H300 Isoform 2 of DnaJ homolog subfamily A member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8069.8069.4 16.44 16.44 2.204 6 1 1 0 832.4127 3246.6594 T22t TMT10 4 (R) GGSQSWSSGESDGQPKEQtPEKPR (H) GGS(0.0)QS(0.0)WS(0.0)S(0.0)GES(0.0)DGQPKEQT(0.99)PEKPR K:TMT10,t:Phosphorylated T DNAJA4 48646.9 1 1 2893.1 66.67 HUMAN 1 12.7074 -44.5537 DGQSSRVSPPAADVL-p O95359;S962-p DGQSSRVSPPAADVL 0.245431250710997 0.0937899460242387 -0.179666666666667 -0.218 11.6679933736593 13.5936665173871 -0.179666666666667 -0.218 0.0681083975945255 0.0437152884387507 -2.27358052027722 -2.61709792435559 O95359 TACC2 O95359.S962.p_TACC2 O95359_S962s _1_1_962_962 O95359 O95359|E9PBC6|O95359-3|E7EMZ9 Transforming acidic coiled-coil-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12023.12023.3 14.19 8.57 1.413 3 1 1 0 964.8171 2812.4776 S962s TMT10 948 (K) RPEGACGDGQSSRVsPPAADVLK (D) RPEGACGDGQS(0.0)S(0.0)RVS(0.99)PPAADVLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TACC2 311818.1 3 8 101.1 597.93 HUMAN 1 -11.668 -13.5937 DGQYENQSPEATSPR-p Q9HBL0;S907-p DGQYENQSPEATSPR 0.105990482053338 0.553353801646688 -0.391 0.157333333333333 20.5169028752328 3.46141973778617 -0.391 0.157333333333333 0.00887788903526865 0.450669353623775 -3.9907719653267 0.812545477313145 Q9HBL0 TNS1 Q9HBL0.S907.p_TNS1 Q9HBL0_S907s_1_1_907_907 Q9HBL0 Q9HBL0|E9PF55|E9PGF5|A0A087WWW7|H0Y4U1 Tensin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6604.6604.3 17.75 17.75 5.216 5 1 1 0 739.9937 2136.9995 N905n S907s TMT10 897 (R) AASDGQYEnQsPEATSPR (S) AAS(0.0)DGQY(0.0)EN(1.0)QS(0.99)PEAT(0.0)S(0.0)PR n:Deamidated,s:Phosphorylated S TNS1 186610.9 1 35 183.2 477.16 HUMAN 1 -20.5169 3.4614 DGRAQPGSPESSGQP-p Q96PN7;S491-p DGRAQPGSPESSGQP 0.807182699101496 0.901196265560022 0.042 0.0126666666666667 1.79241631324315 0.631468479648805 0.042 0.0126666666666667 0.66184816435565 0.864675496670772 0.462324093420242 0.178680379319489 Q96PN7 TRERF1 Q96PN7.S491.p_TRERF1 Q96PN7_S491s _1_1_491_491 Q96PN7 Q05GC8|Q96PN7|Q96PN7-5 Transcriptional-regulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6179.6179.2 15.72 15.72 1.456 3 1 1 0 904.4519 1727.9328 S491s TMT10 487 (R) AQPGsPESSGQPK (G) AQPGS(0.99)PES(0.0)S(0.0)GQPK K:TMT10,s:Phosphorylated S TRERF1 132995.3 4 3 1115.1 175.65 HUMAN 1 1.7924 0.6315 DGRREVRSPTKAPHL-p O43491;S598-p DGRREVRSPTKAPHL 0.0742703858650733 0.0393337761103315 0.779666666666667 -0.604333333333333 24.2158290145076 18.8590860561866 0.779666666666667 -0.604333333333333 0.00378806217419863 0.0130044321885386 4.84787293249873 -3.63510640497625 O43491 EPB41L2 O43491.S598.p_EPB41L2 O43491_S598s _1_1_598_598 O43491 O43491|E9PHY5|O43491-4 Band 4.1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14902.14902.5 12.91 12.91 2.099 2 1 1 0 534.9131 2590.5648 S598s TMT10 595 (R) EVRsPTKAPHLQLIEGK (K) EVRS(0.99)PT(0.0)KAPHLQLIEGK K:TMT10,s:Phosphorylated S EPB41L2 113099.5 6 9 469.1 302.69 HUMAN 1 24.2158 -18.8591 DGRSISLYYTGEKGQ-p P19338;Y462-p DGRSISLYYTGEKGQ 0.688459973821681 0.50070180800279 0.093 -0.0986666666666667 3.04313185055995 4.02128732181125 0.093 -0.0986666666666667 0.496234340318707 0.396160588195474 0.729159329394195 -0.921039900629104 P19338 NCL P19338.Y462.p_NCL P19338_Y462y _1_1_462_462 P19338 P19338 Nucleolin GG20160819_MSz_CCLE_T4D7_pY_Injection_01.22273.22273.2 17.71 8.82 1.277 5 1 1 0 849.9412 1618.9092 Y462y TMT10 458 (R) SISLyYTGEK (G) S(0.0)IS(0.0)LY(0.99)Y(0.0)T(0.0)GEK K:TMT10,y:Phosphorylated Y NCL 76670.1 3 1 198.1 17.71 HUMAN 1 3.0431 -4.0213 DGSEEPGSETSDAKS-p P10636;S61-p DGSEEPGSETSDAKS 0.914807630660632 0.435941577542739 0.023 0.077 0.757758879734346 4.80377822440289 0.023 0.077 0.83989329073303 0.330843173168646 0.211959983584858 1.06776496757824 P10636 MAPT P10636.S61.p_MAPT P10636_S61s _1_1_61_61 P10636 P10636-9|A0A0G2JMX7|A0A0G2JS76|A0A0G2JPD5|A0A0G2JQJ7|P10636-8|P10636-7|P10636-5|P10636-4 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14386.14386.3 20.11 20.11 2.581 7 1 1 0 977.1103 2849.3576 S61s TMT10 45 (K) ESPLQTPTEDGSEEPGsETSDAK (S) ES(0.0)PLQT(0.0)PT(0.0)EDGS(0.0)EEPGS(0.99)ET(0.0)S(0.0)DAK K:TMT10,s:Phosphorylated S MAPT 79154.4 1 3 119.1 551.6 HUMAN 1 0.7578 4.8038 DGSENLCTPQQSRTE-p E7ETA6;T877-p DGSENLCTPQQSRTE 0.197771061122644 0.961510819514568 0.244 -0.00799999999999999 13.7163471854661 0.245016285860194 0.244 -0.00799999999999997 0.0424976858144709 0.945144848180703 2.64098543169484 -0.0720505227370758 E7ETA6 PCM1 E7ETA6.T877.p_PCM1 E7ETA6_T877t _1_1_877_877 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6055.6055.3 15.16 15.16 4.658 4 1 1 0 629.9423 1807.8442 T877t TMT10 869 (R) SDGSENLCtPQQSR (T) S(0.0)DGS(0.0)ENLCT(0.99)PQQS(0.0)R C:Carbamidomethylation,t:Phosphorylated T PCM1 229381.8 3 28 13.1 1159.95 HUMAN 1 13.7163 -0.245 DGSGSPHSPHQLSSK-p Q9H4A3-7;S2445-p DGSGSPHSPHQLSSK 0.429621058024935 0.0529111182306038 0.132666666666667 0.227166666666667 6.7552801053747 17.027050401938 0.132666666666667 0.227166666666667 0.211092104409056 0.0198287327673473 1.41810455840042 3.26547130531229 Q9H4A3 WNK1 Q9H4A3.7.S2445.p_WNK1 Q9H4A3-7_S2442sS2445s_2_2_2442_2445 Q9H4A3-7 Q9H4A3|Q9H4A3-2|F5GWT4|Q9H4A3-4|Q9H4A3-7|Q9H4A3-6|Q9H4A3-5 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7985.7985.4 13.74 13.74 1.107 5 2 2 0 617.7783 2308.157 S2442s S2445s TMT10 2435 (R) DVDDGSGsPHsPHQLSSK (S) DVDDGS(0.0)GS(0.99)PHS(0.99)PHQLS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S WNK1 301202.7 8 30 162.1 495.27 HUMAN 2 6.7553 17.0271 DGSLKSSSPTSYWKS-p Q92614;S2007-p DGSLKSSSPTSYWKS 0.133045187506662 0.0715244512344475 -0.285333333333333 0.216666666666667 18.053113402716 15.2277754827227 -0.285333333333333 0.216666666666667 0.015656282884023 0.0300069912561682 -3.47302238723902 2.91934024755769 Q92614 MYO18A Q92614.S2007.p_MYO18A Q92614_S2007s _1_1_2007_2007 Q92614 Q92614|Q92614-4|A0A0D9SFK2|Q92614-3|Q92614-2|Q92614-5 Unconventional myosin-XVIIIa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16173.16173.2 9.33 3.7 1.39 6 1 1 0 790.8925 1500.8099 S2007s TMT10 2005 (K) SSsPTSYWK (S) S(0.0)S(0.0)S(0.99)PT(0.0)S(0.0)Y(0.0)WK K:TMT10,s:Phosphorylated S MYO18A 234309.1 3 12 783.1 225.59 HUMAN 1 -18.0531 15.2278 DGSNVTVTPGPGEQT-p Q96PN7;T767-p DGSNVTVTPGPGEQT 0.152472658382578 0.945818175866251 0.313666666666667 -0.013 16.4213111128257 0.347802410271152 0.313666666666667 -0.013 0.0227965375229871 0.923038379100522 3.14951021370962 -0.101187243317925 Q96PN7 TRERF1 Q96PN7.T767.p_TRERF1 Q96PN7_T767t _1_1_767_767 Q96PN7 Q05GC8|Q96PN7|Q96PN7-5|Q96PN7-4|Q96PN7-3|Q96PN7-2 Transcriptional-regulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16751.16751.3 19.24 19.24 1.215 6 1 1 0 955.4556 2784.3849 T767t TMT10 756 (R) SNSIDGSNVTVtPGPGEQTVDVEPR (I) S(0.0)NS(0.0)IDGS(0.0)NVT(0.0)VT(0.99)PGPGEQT(0.0)VDVEPR t:Phosphorylated T TRERF1 132995.3 1 9 1115.1 175.65 HUMAN 1 16.4213 -0.3478 DGSQKTESSTEGKEQ-p A8MXP9;S620-p DGSQKTESSTEGKEQ 0.829543328332667 0.0193470468859547 -0.105 0.649 1.56191168235109 23.5407428922946 -0.105 0.649 0.697925122984279 0.00442512670877719 -0.409439636954132 4.67803524489527 A8MXP9 NotFound A8MXP9.S620.p_NotFound A8MXP9_S620s _1_1_620_620 A8MXP9 A8MXP9|P43243|D6REM6|P43243-2|B3KM87 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5682.5895.5 10.06 10.06 1.101 7 1 1 0 708.5759 3458.8835 S620s TMT10 610 (K) SKTDGSQKTEsSTEGKEQEEK (S) S(0.0)KT(0.0)DGS(0.0)QKT(0.0)ES(0.99)S(0.0)T(0.0)EGKEQEEK K:TMT10,s:Phosphorylated S MATR3 100478.9 5 26 92.1 615.57 HUMAN 1 -1.5619 23.5407 DGSSARGSFSGQAQP-p Q92609-2;S752-p DGSSARGSFSGQAQP 0.559139893737241 0.175662455364764 -0.0993333333333333 -0.139333333333333 4.65952100995005 9.93198197386842 -0.0993333333333334 -0.139333333333333 0.342017162031352 0.101578501697674 -1.04127700302558 -1.96910558933606 Q92609 TBC1D5 Q92609.2.S752.p_TBC1D5 Q92609-2_S752s _1_1_752_752 Q92609-2 Q92609-2 Isoform 2 of TBC1 domain family member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7472.7472.2 11.42 11.42 1.551 2 1 1 0 614.2801 1147.5854 S752s Hydrogen 751 (R) GsFSGQAQPLR (T) GS(0.99)FS(0.0)GQAQPLR s:Phosphorylated S TBC1D5 91784.7 4 9 328.1 359.68 HUMAN 1 -4.6595 -9.932 DGTDDFLTDKEDEKA-p Q15527;T195-p DGTDDFLTDKEDEKA 0.367137725804172 0.0183445546607262 -0.184 0.361666666666667 8.07819690708982 23.8988200953328 -0.184 0.361666666666667 0.155661176762501 0.00407490971172785 -1.6487230272328 4.76457181481962 Q15527 SURF2 Q15527.T195.p_SURF2 Q15527_T195t _1_1_195_195 Q15527 Q15527 Surfeit locus protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19673.19673.3 18.17 15.47 2.123 4 1 1 0 1057.1576 3089.4889 T195t TMT10 180 (K) DLGSTEDGDGTDDFLtDKEDEK (A) DLGS(0.0)T(0.0)EDGDGT(0.0)DDFLT(0.99)DKEDEK K:TMT10,t:Phosphorylated T SURF2 30103.5 1 5 1281.1 158.83 HUMAN 1 -8.0782 23.8988 DGTDTSQSGEDGGCW-p Q9NPI1-2;S265-p DGTDTSQSGEDGGCW 0.904333446509495 0.492210459888016 0.017 0.105666666666667 0.857902595879565 4.1152602307117 0.0200963811443523 0.105666666666667 0.82074782480947 0.387680517867601 0.23784488478488 0.938936141991542 Q9NPI1 BRD7 Q9NPI1.2.S265.p_BRD7 Q9NPI1-2_S265s _1_1_265_265 Q9NPI1-2 Q9NPI1-2 Isoform 2 of Bromodomain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7567.7567.3 18.18 18.18 2.888 4 1 1 0 722.2873 2084.8777 S265s TMT10 258 (K) DGTDTSQsGEDGGCWQR (E) DGT(0.0)DT(0.0)S(0.0)QS(0.99)GEDGGCWQR C:Carbamidomethylation,s:Phosphorylated S BRD7 74721.8 2 2 1237.1 163.17 HUMAN 1 0.8579 4.1153 DGTEIAVSPRSLHSE-p Q06587;S38-p DGTEIAVSPRSLHSE 0.982673656696447 0.286537227082636 -0.004 0.129666666666667 0.151190954271663 7.16081854174815 -0.004 0.129666666666667 0.965785997732747 0.192272930603871 -0.0449150004685546 1.4887145138929 Q06587 RING1 Q06587.S38.p_RING1 Q06587_S38s _1_1_38_38 Q06587 Q06587 E3 ubiquitin-protein ligase RING1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21604.21813.3 20.79 20.79 3.937 3 1 1 0 708.6804 2044.0582 S38s TMT10 24 (R) TPQEAIMDGTEIAVsPR (S) T(0.0)PQEAIMDGT(0.0)EIAVS(0.99)PR s:Phosphorylated S RING1 42999.1 7 1 1195.1 167.38 HUMAN 1 -0.1512 7.1608 DGTELDESFKEFGKN-p O15265-2;S115-p DGTELDESFKEFGKN 0.0404299711718947 0.463460964545051 -0.933666666666667 -0.071 31.1766994637044 4.4539642556388 -0.933666666666667 -0.071 0.000762658392346079 0.3585944588964 -6.79828096949958 -1.0027856631663 O15265 ATXN7 O15265.2.S115.p_ATXN7 O15265-2_S115s _1_1_115_115 O15265-2 O15265-2 Isoform b of Ataxin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19552.19552.3 11.05 11.05 2.524 2 1 1 0 790.4058 2289.2218 S115s TMT10 108 (K) DGTELDEsFKEFGK (N) DGT(0.0)ELDES(0.99)FKEFGK K:TMT10,s:Phosphorylated S ATXN7 102365.1 1 1 2096.1 97.83 HUMAN 1 -31.1767 -4.454 DGTTRSPSIDSIQKD-p Q99569;S512-p DGTTRSPSIDSIQKD 0.461071432758157 0.0604667924365095 -0.0986666666666667 0.284 6.1993800438977 16.2305226595364 -0.0986666666666667 0.284 0.239917537726396 0.0238203278207166 -1.32000478137317 3.11034198652654 Q99569 PKP4 Q99569.S512.p_PKP4 Q99569_S512s _1_1_512_512 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13799.13799.3 18.44 18.44 1.551 5 1 1 0 958.8304 2794.5099 S512s TMT10 497 (R) LQHAVPADDGTTRSPsIDSIQK (D) LQHAVPADDGT(0.0)T(0.0)RS(0.0)PS(0.99)IDS(0.0)IQK K:TMT10,s:Phosphorylated S PKP4 132664.7 3 20 122.1 546.31 HUMAN 1 -6.1994 16.2305 DGVDLAASCGARVGD-p O60292;S17-p DGVDLAASCGARVGD 0.652559919785478 0.559006029167553 0.123333333333333 0.0563333333333334 3.47686531816034 3.40603867856141 0.123333333333333 0.0563333333333334 0.449069405518152 0.456453069741274 0.815710907934598 0.801621225483794 O60292 SIPA1L3 O60292.S17.p_SIPA1L3 O60292_S17s _1_1_17_17 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16740.16740.3 15.65 15.65 8.564 2 1 1 0 623.6314 1788.9112 S17s TMT10 6 (R) AIPSDGVDLAAsCGAR (V) AIPS(0.0)DGVDLAAS(0.99)CGAR C:Carbamidomethylation,s:Phosphorylated S SIPA1L3 195918.6 1 1 144.1 520.25 HUMAN 1 3.4769 3.406 DGVEGPRTPKYMNNI-p Q6PKG0;T376-p DGVEGPRTPKYMNNI 0.0586927429304381 0.00463734855393385 -0.598666666666667 -0.575666666666667 26.9051903365425 34.1430542075548 -0.598666666666667 -0.575666666666667 0.00203929928207872 0.000385207362505804 -5.5430572871745 -7.78400910485748 Q6PKG0 LARP1 Q6PKG0.T376.p_LARP1 Q6PKG0_T376t _1_1_376_376 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10814.10814.3 13 13 99 1 1 1 0 700.0609 2018.2002 T376t TMT10 367 (R) KFDGVEGPRtPK (Y) KFDGVEGPRT(1.0)PK K:TMT10,t:Phosphorylated T LARP1 123907.4 7 43 28.1 931.95 HUMAN 1 -26.9052 -34.1431 DGVLVPGS_______-p Q92837;S279-p DGVLVPGS_______ 0.0514604878393714 0.0110046346773908 0.552666666666667 0.969666666666667 28.2174335722752 27.4387943870252 0.552666666666667 0.969666666666667 0.00150749764642633 0.00180351833283548 5.90758130107514 5.68115966724474 Q92837 FRAT1 Q92837.S279.p_FRAT1 Q92837_S279s _1_1_279_279 Q92837 Q92837 Proto-oncogene FRAT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16824.16824.2 11.15 11.15 11.154 2 1 1 0 605.7989 1130.6255 S279s TMT10 270 (R) TGDGVLVPGs (-) T(0.0)GDGVLVPGS(0.99) s:Phosphorylated S FRAT1 29434.8 1 2 3094.1 60.86 HUMAN 1 28.2174 27.4388 DGVSEAASLEEPKEE-p Q9H0E9-2;S714-p DGVSEAASLEEPKEE 0.0933084416341688 0.5128857917452 -0.75 0.349333333333333 21.8915708523446 3.89022762095856 -0.75 0.349333333333333 0.00646908585220265 0.408297986195594 -4.29717827208392 0.895938801254731 Q9H0E9 BRD8 Q9H0E9.2.S714.p_BRD8 Q9H0E9-2_S710sS714s_2_2_710_714 Q9H0E9-2 Q9H0E9|Q9H0E9-2|B5MCW3|Q9H0E9-4|Q9H0E9-3 Isoform 2 of Bromodomain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17005.17005.3 19.37 17.27 99 2 2 2 0 974.42 2761.294 S710s S714s TMT10 698 (K) DAPGEDEEEDGVsEAAsLEEPK (E) DAPGEDEEEDGVS(1.0)EAAS(1.0)LEEPK K:TMT10,s:Phosphorylated S BRD8 103294.1 1 12 654.1 253.82 HUMAN 1 -21.8916 3.8902 DGVSGEISDTELEQT-p O95453;S587-p DGVSGEISDTELEQT 0.905290679561434 0.0248010178031132 0.0193333333333333 0.388 0.851471199658927 21.8418875124054 0.0193333333333333 0.388 0.821964157291548 0.00654351720665969 0.236195029674058 4.28138084465748 O95453 PARN O95453.S587.p_PARN O95453_S587s _1_1_587_587 O95453 O95453|O95453-3|O95453-2|O95453-4 Poly(A)-specific ribonuclease PARN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20571.20571.3 36.02 31.61 1.13 8 1 1 0 1501.0095 4421.0372 S587s TMT10 567 (K) RNLSPSQEEAGLEDGVSGEIsDTELEQTDSCAEPLSEGR (K) RNLS(0.0)PS(0.0)QEEAGLEDGVS(0.0)GEIS(0.99)DT(0.0)ELEQT(0.0)DS(0.0)CAEPLS(0.0)EGR C:Carbamidomethylation,s:Phosphorylated S PARN 73963.1 15 7 320.1 365.2 HUMAN 1 0.8515 21.8419 DGWGGYGSDKRMSEG-p Q15424;S803-p DGWGGYGSDKRMSEG 0.108820465381558 0.0855947378764516 0.399 -0.19 20.1815338067514 14.1287540316888 0.399 -0.19 0.00959061857848456 0.0386477839635173 3.91801823741151 -2.71494187774254 Q15424 SAFB Q15424.S803.p_SAFB Q15424_S803s _1_1_803_803 Q15424 Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13912.13912.3 11.1 10.42 3.887 2 1 1 0 527.2452 1499.7531 S803s TMT10 796 (R) DGWGGYGsDK (R) DGWGGY(0.0)GS(0.99)DK K:TMT10,s:Phosphorylated S SAFB 103096.3 3 39 83.1 629.62 HUMAN 1 20.1815 -14.1288 DGWPRAKSPNGSSSV-p Q8NDV7;S1599-p DGWPRAKSPNGSSSV 0.250312215087319 0.708815323674141 -0.215 -0.0366666666666666 11.4820521617334 2.0550868568623 -0.215 -0.0366666666666666 0.0710877524954625 0.623004687502511 -2.24078724886085 -0.520906054636578 Q8NDV7 TNRC6A Q8NDV7.S1599.p_TNRC6A Q8NDV7_S1599s_1_1_1599_1599 Q8NDV7 Q8NDV7|Q8NDV7-5|Q8NDV7-6|Q8NDV7-2 Trinucleotide repeat-containing gene 6A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22652.23063.4 18.71 18.71 2.794 4 1 1 0 831.427 3241.7361 S1599s N1601n TMT10 1597 (R) AKsPnGSSSVNWPPEFRPGEPWK (G) AKS(0.99)PN(0.99)GS(0.0)S(0.0)S(0.0)VN(0.0)WPPEFRPGEPWK K:TMT10,s:Phosphorylated S,n:Deamidated TNRC6A 211092.3 9 16 181.1 478.43 HUMAN 1 -11.4821 -2.0551 DGYNQPDSKRRQTNN-p O60506;S575-p DGYNQPDSKRRQTNN 0.398575072247104 0.023968573651976 -0.228666666666667 0.312333333333333 7.37271371952866 22.0884193517954 -0.228666666666667 0.312333333333333 0.183116984548946 0.00618241372903356 -1.52610987211791 4.33756726149097 O60506 SYNCRIP O60506.S575.p_SYNCRIP O60506_S575s _1_1_575_575 O60506 O43390-2|O60506|O43390-3|O60506-2|O43390-4|B4DT28 Heterogeneous nuclear ribonucleoprotein Q HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6858.6858.3 13.92 13.92 10.664 2 1 1 0 664.0145 1910.0587 S575s TMT10 566 (R) KADGYNQPDsK (R) KADGY(0.0)NQPDS(0.99)K K:TMT10,s:Phosphorylated S SYNCRIP 69829.6 2 13 1376.1 148.68 HUMAN 1 -7.3727 22.0884 DGYSTKDSYSSRDYP-p P38159;S219-p DGYSTKDSYSSRDYP 0.191102046396083 0.448942352891444 0.206666666666667 0.0926666666666667 14.0351786242902 4.63568788116967 0.206666666666667 0.0926666666666667 0.0394895457058485 0.343899236697077 2.69937963335049 1.03665516845427 P38159 RBMX P38159.S219.p_RBMX P38159_S219s _1_1_219_219 P38159 P38159|Q96E39|P38159-2 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6807.6807.2 12.72 7.43 1.424 7 1 1 0 1009.9594 1938.9445 S219s TMT10 211 (R) DDGYSTKDsYSSR (D) DDGY(0.0)S(0.0)T(0.0)KDS(0.99)Y(0.0)S(0.0)S(0.0)R K:TMT10,s:Phosphorylated S RBMX 42331.1 4 17 102.1 595.29 HUMAN 1 14.0352 4.6357 DHCLQEASPRYKSLR-p Q8N2G8;S467-p DHCLQEASPRYKSLR 0.626617753150603 0.222763476569107 -0.0713333333333333 -0.184666666666667 3.77092002828896 8.58977370505572 -0.0713333333333334 -0.184666666666667 0.419670069843419 0.138363847342541 -0.873079422611938 -1.7367563955387 Q8N2G8 GHDC Q8N2G8.S467.p_GHDC Q8N2G8_S467s _1_1_467_467 Q8N2G8 Q8N2G8|Q8N2G8-3 GH3 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10654.10654.4 10.85 7.6 10.847 2 1 1 0 738.1141 2869.4627 S467s TMT10 450 (R) NLSEENRDKLDHCLQEAsPR (Y) NLS(0.0)EENRDKLDHCLQEAS(0.99)PR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GHDC 58092.4 1 4 3429.1 51.3 HUMAN 1 -3.7709 -8.5898 DHDDTSDSDSDGLTL-p Q9BTC0;S154-p DHDDTSDSDSDGLTL 0.565856073226583 0.256302373914311 0.0783333333333333 0.116666666666667 4.55529280077195 7.78719295705276 0.0783333333333333 0.116666666666667 0.350324668662 0.166448813722287 1.02189377247659 1.59772892593683 Q9BTC0 DIDO1 Q9BTC0.S154.p_DIDO1 Q9BTC0_T151tS152sS154s_3_3_151_154 Q9BTC0 Q9BTC0|Q9BTC0-1 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17804.17804.3 13.49 13.49 1.25 5 3 3 0 883.3414 2408.1101 T151t S152s S154s TMT10 144 (K) GGDDHDDtsDsDSDGLTLK (E) GGDDHDDT(0.99)S(0.99)DS(0.99)DS(0.0)DGLT(0.0)LK K:TMT10,t:Phosphorylated T,s:Phosphorylated S DIDO1 245579.9 15 33 153.1 505.54 HUMAN 1 4.5553 7.7872 DHDFSESSEEEAPAE-p P23497-4;S410-p DHDFSESSEEEAPAE 0.408838439850386 0.00967265628027221 0.144 0.472 7.16810645753708 28.3800595634973 0.144 0.472 0.191950547081968 0.00145209170201043 1.49040846727336 5.94523862495726 P23497 SP100 P23497.4.S410.p_SP100 P23497-4_S407sS409sS410s_3_3_407_410 P23497-4 P23497-4|P23497-3|P23497-2 Isoform Sp100-C of Nuclear autoantigen Sp-100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15601.15601.3 14.48 14.48 5.798 5 3 3 0 1115.1328 3103.4766 S407s S409s S410s TMT10 398 (K) RVIGQDHDFsEssEEEAPAEASSGALR (S) RVIGQDHDFS(0.99)ES(0.99)S(0.99)EEEAPAEAS(0.0)S(0.0)GALR s:Phosphorylated S SP100 103285 2 13 542.1 276.37 HUMAN 1 7.1681 28.3801 DHDNDKESDVEI___-p O15379-2;S425-p DHDNDKESDVEI___ 0.880571153104931 0.392059909450699 -0.0223333333333333 0.134333333333333 1.08727843255146 5.40638552416647 -0.0223333333333333 0.134333333333333 0.778524271389001 0.28797941661346 -0.295630259681089 1.17778178309788 O15379 HDAC3 O15379.2.S425.p_HDAC3 O15379-2_S425s _1_1_425_425 O15379-2 O15379-2 Isoform 2 of Histone deacetylase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17469.17469.4 8.94 6.03 8.944 4 1 1 0 1002.1918 3925.7677 S425s TMT10 400 (R) GPEENYSRPEAPNEFYDGDHDNDKEsDVEI (-) GPEENY(0.0)S(0.0)RPEAPNEFY(0.0)DGDHDNDKES(0.99)DVEI K:TMT10,s:Phosphorylated S HDAC3 49852 2 2 4430.1 31.5 HUMAN 1 -1.0873 5.4064 DHEKKAYSFCGTVEY-p Q15418;S221-p DHEKKAYSFCGTVEY 0.425033318045053 0.636689425765236 -0.108333333333333 0.05 6.84599372865383 2.6685867606171 -0.108333333333333 0.05 0.206728630276059 0.54093031865651 -1.43402737905006 0.652169519978697 Q15418 RPS6KA1 Q15418.S221.p_RPS6KA1 Q15418_S221s _1_1_221_221 Q15418 Q9UK32|Q9UK32-2|Q15418-2|P51812|E9PGT3|Q15418-4|Q15418-3 Ribosomal protein S6 kinase alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24054.24054.4 22.13 22.13 3.219 4 1 1 0 690.5879 2679.3675 S221s TMT10 218 (K) KAYsFCGTVEYMAPEVVNR (Q) KAY(0.0)S(0.99)FCGT(0.0)VEY(0.0)MAPEVVNR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RPS6KA1 83120.8 17 2 1026.1 186.86 HUMAN 1 -6.846 2.6686 DHESSPGTDEDKSG_-p Q13427;T748-p DHESSPGTDEDKSG_ 0.25414491835742 0.0448203182437469 0.318666666666667 0.381 11.3252297200803 18.0503318026594 0.318666666666667 0.381 0.0737016189833127 0.0156663137429452 2.21318799456933 3.46960813863764 Q13427 PPIG Q13427.T748.p_PPIG Q13427_T748t _1_1_748_748 Q13427 Q13427|E9PG73 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6958.6958.4 14.77 14.77 2.654 4 1 1 0 626.5551 2423.2294 T748t TMT10 739 (K) KFDHESSPGtDEDKSG (-) KFDHES(0.0)S(0.0)PGT(0.99)DEDKS(0.0)G K:TMT10,t:Phosphorylated T PPIG 89129.1 1 19 112.1 571.91 HUMAN 1 11.3252 18.0503 DHGLPAVSVDSPVRY-p X6RAB3;S804-p DHGLPAVSVDSPVRY 0.713870565238222 0.191914586260089 0.077 -0.205333333333333 2.75872976422969 9.42620497481651 0.077 -0.205333333333333 0.529818383887688 0.114124661530303 0.670966588792376 -1.88145830061684 X6RAB3 NotFound X6RAB3.S804.p_NotFound X6RAB3_S804s _1_1_804_804 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26943.26943.4 21.5 21.5 1.135 5 1 1 0 858.4437 3350.7938 S804s TMT10 787 (K) YSAFQLAPFQDHGLPAVsVDSPVRYK (A) Y(0.0)S(0.0)AFQLAPFQDHGLPAVS(0.99)VDS(0.0)PVRY(0.0)K K:TMT10,s:Phosphorylated S USP6NL 96835.5 3 16 364.1 342.41 HUMAN 1 2.7587 -9.4262 DHHGRYSSQDADEQD-p Q9C0C2;S920-p DHHGRYSSQDADEQD 0.104209357384164 0.635727290424665 -0.336666666666667 0.0453333333333334 20.705058385001 2.67728243134486 -0.336666666666667 0.0453333333333334 0.00850147264034041 0.539848323322456 -4.03192402115112 0.653980007082529 Q9C0C2 TNKS1BP1 Q9C0C2.S920.p_TNKS1BP1 Q9C0C2_S920s _1_1_920_920 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11072.11072.4 18.21 15.73 1.341 3 1 1 0 754.836 2936.36 S920s TMT10 913 (R) DHHGRYSsQDADEQDWEFQK (R) DHHGRY(0.0)S(0.0)S(0.99)QDADEQDWEFQK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 10 35 4.1 2105.7 HUMAN 1 -20.7051 2.6773 DHLEGLSSDDEETST-p Q9Y5B6;S558-p DHLEGLSSDDEETST 0.870861616619807 0.111189667466433 0.0273333333333333 0.215666666666667 1.17650564897014 12.5931604100113 0.0273333333333333 0.215666666666667 0.762692428636696 0.0550407013230234 0.317585245720799 2.436721287363 Q9Y5B6 PAXBP1 Q9Y5B6.S558.p_PAXBP1 Q9Y5B6_S557sS558s_2_2_557_558 Q9Y5B6 Q9Y5B6|Q9Y5B6-2 PAX3- and PAX7-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24866.24866.4 17.18 17.18 3.02 6 2 2 0 887.1371 3369.6044 M549m S557s S558s TMT10 549 (K) mADHLEGLssDDEETSTDITNFNLEK (D) M(1.0)ADHLEGLS(0.99)S(0.99)DDEET(0.0)S(0.0)T(0.0)DIT(0.0)NFNLEK K:TMT10,m:Oxidized methionine,s:Phosphorylated S PAXBP1 105258.2 21 10 978.1 192.69 HUMAN 1 1.1765 12.5932 DHNIPQESPKPVKHQ-p P35580-4;S214-p DHNIPQESPKPVKHQ 0.139893346402386 0.00431327573841351 0.358 -0.876 17.4802305774756 34.7618210174212 0.358 -0.876 0.0178639272841084 0.000334054939830519 3.35782717083317 -8.0069417331401 P35580 MYH10 P35580.4.S214.p_MYH10 P35580-4_S214s _1_1_214_214 P35580-4 P35580-4 Isoform 4 of Myosin-10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6918.6918.5 12.18 12.18 99 1 1 1 0 621.9361 3025.6786 S214s TMT10 207 (K) DHNIPQEsPKPVKHQGELER (Q) DHNIPQES(1.0)PKPVKHQGELER K:TMT10,s:Phosphorylated S MYH10 233493.8 2 37 296.2 379.15 HUMAN 1 17.4802 -34.7618 DHNMDVNTEEDDDGE-p Q8NI35;T669-p DHNMDVNTEEDDDGE 0.842179784254459 0.0421918828246993 0.0326666666666667 0.264 1.44273855789582 18.4176292541764 0.0326666666666667 0.264 0.717341809909635 0.0143958421036606 0.381522497692833 3.54429716587051 Q8NI35 INADL Q8NI35.T669.p_INADL Q8NI35_T669t _1_1_669_669 Q8NI35 Q8NI35|Q8NI35-2|Q8NI35-3|Q8NI35-4|A0A087WUZ6|A0A0X1KG69|Q8NI35-5 InaD-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24175.24444.4 23.63 18.32 5.514 6 1 1 0 1135.5382 4459.1135 T669t TMT10 651 (R) RTETSLPETEVDHNMDVNtEEDDDGELALWSPEVK (I) RT(0.0)ET(0.0)S(0.0)LPET(0.0)EVDHNMDVNT(0.99)EEDDDGELALWS(0.0)PEVK K:TMT10,t:Phosphorylated T PATJ 197163.3 3 10 127.1 542.92 HUMAN 1 1.4427 18.4176 DHRDRGRYPDHSVDR-p Q15424-3;Y757-p DHRDRGRYPDHSVDR 0.90552186362789 0.357811881026549 -0.051 0.091 0.847306797654233 5.92083060652574 -0.051 0.0910000000000001 0.822752707684226 0.255809659334766 -0.235125828858931 1.2701489269849 Q15424 SAFB Q15424.3.Y757.p_SAFB Q15424-3_Y757y _1_1_757_757 Q15424-3 Q15424-3|Q15424-4|Q15424-2 Isoform 3 of Scaffold attachment factor B1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.3883.3883.4 10.97 6.7 7.282 2 1 1 0 417.4566 1586.8349 Y757y TMT10 755 (R) GRyPDHSVDRR (E) GRY(0.99)PDHS(0.0)VDRR y:Phosphorylated Y SAFB 103309.5 1 1 322.1 10.97 HUMAN 1 -0.8473 5.9208 DHRKPLISPQTSHKT-p O15018;S1919-p DHRKPLISPQTSHKT 0.900729474872813 0.0446267912162327 0.038 -0.345666666666667 0.889360010334685 18.0748161457578 0.038 -0.345666666666667 0.814824350188705 0.0155782398236198 0.245890555305562 -3.47456302136832 O15018 PDZD2 O15018.S1919.p_PDZD2 O15018_S1919s _1_1_1919_1919 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10316.10316.3 12.22 12.22 2.789 3 1 1 0 668.3926 1923.1994 S1919s TMT10 1915 (R) KPLIsPQTSHK (T) KPLIS(0.99)PQT(0.0)S(0.0)HK K:TMT10,s:Phosphorylated S PDZD2 304146 2 27 85.1 628.64 HUMAN 1 0.8894 -18.0748 DHRNVSESPNRKNEK-p Q13427;S415-p DHRNVSESPNRKNEK 0.904077584395411 0.0079791159411207 0.052 0.85 0.861077988860059 29.9135971038994 0.0519999999999999 0.85 0.820147945131672 0.0010200942266063 0.238658851580535 6.39577901581863 Q13427 PPIG Q13427.S415.p_PPIG Q13427_S415s _1_1_415_415 Q13427 Q13427|E9PG73 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4482.4482.4 11.24 9.26 2.127 2 1 1 0 543.0466 2089.1969 S415s TMT10 411 (R) NVSEsPNRKNEK (E) NVS(0.0)ES(0.99)PNRKNEK K:TMT10,s:Phosphorylated S PPIG 89129.1 7 8 112.1 571.91 HUMAN 1 0.8611 29.9136 DHSGGSPSPPTSEPA-p Q8TAD8;S54-p DHSGGSPSPPTSEPA 0.857922265116985 0.0686121481207514 0.0393333333333333 0.338333333333333 1.29675534023482 15.4769168955578 0.0393333333333333 0.338333333333333 0.741864288922939 0.0283340274585799 0.346744782590567 2.96637347355919 Q8TAD8 SNIP1 Q8TAD8.S54.p_SNIP1 Q8TAD8_S52sS54s_2_2_52_54 Q8TAD8 Q8TAD8 Smad nuclear-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4187.4662.3 13.57 13.57 2.213 5 2 2 0 740.993 2061.0311 S52s S54s TMT10 45 (R) RPDHSGGsPsPPTSEPAR (S) RPDHS(0.0)GGS(0.99)PS(0.99)PPT(0.0)S(0.0)EPAR s:Phosphorylated S SNIP1 45833.8 6 9 1038.1 185.39 HUMAN 1 1.2968 15.4769 DHVAVLGSPLAASKE-p Q9H8H0;S278-p DHVAVLGSPLAASKE 0.974078433477375 0.152134629320107 0.00733333333333333 0.148666666666667 0.223443272963512 10.7534224585321 0.00733333333333335 0.148666666666667 0.949851412091298 0.0840732341230053 0.065863542158707 2.11203727607195 Q9H8H0 NOL11 Q9H8H0.S278.p_NOL11 Q9H8H0_S278s _1_1_278_278 Q9H8H0 Q9H8H0 Nucleolar protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.26068.26068.4 13.89 13.89 4.954 3 1 1 0 722.1439 2805.5875 S278s TMT10 261 (R) NGVALTALDQDHVAVLGsPLAASK (E) NGVALT(0.0)ALDQDHVAVLGS(0.99)PLAAS(0.0)K K:TMT10,s:Phosphorylated S NOL11 82092 1 1 5622.1 17.65 HUMAN 1 0.2234 10.7534 DIAEQNESSDEESLR-p Q96KC8;S479-p DIAEQNESSDEESLR 0.546236180544102 0.0448652421118282 -0.111666666666667 -0.246 4.84776442274097 18.0423629601618 -0.111666666666667 -0.246 0.327509240376422 0.0156950861538985 -1.07608487205995 -3.46799621887304 Q96KC8 DNAJC1 Q96KC8.S479.p_DNAJC1 Q96KC8_S479sS480s_2_2_479_480 Q96KC8 Q96KC8 DnaJ homolog subfamily C member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19349.19349.2 14.22 14.22 3.584 3 2 2 0 1365.6055 2570.2622 S479s S480s TMT10 470 (K) DFDIAEQNEssDEESLRK (E) DFDIAEQNES(0.99)S(0.99)DEES(0.0)LRK K:TMT10,s:Phosphorylated S DNAJC1 64224 11 7 1670.1 122.29 HUMAN 1 -4.8478 -18.0424 DIAGAPASSPEAPPA-p Q9P2E9;S1276-p DIAGAPASSPEAPPA 0.666595970118167 0.631242031978969 -0.059 0.0526666666666667 3.29340126457463 2.71548759252224 -0.059 0.0526666666666667 0.468446365253968 0.535120071222756 -0.779400623172834 0.661919526511947 Q9P2E9 RRBP1 Q9P2E9.S1276.p_RRBP1 Q9P2E9_S1276sS1277s_2_2_1276_1277 Q9P2E9 Q9P2E9|A0A0A0MRV0|Q9P2E9-2|Q9P2E9-3|A0A087WVV2|F8W7S5|A0A087WU26 Ribosome-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19732.19732.4 15.39 15.39 10.647 3 2 2 0 883.4193 3370.7167 S1276s S1277s TMT10 1263 (K) SHVEDGDIAGAPAssPEAPPAEQDPVQLK (T) S(0.0)HVEDGDIAGAPAS(0.99)S(0.99)PEAPPAEQDPVQLK K:TMT10,s:Phosphorylated S RRBP1 152868.9 1 20 479.1 299.08 HUMAN 1 -3.2934 2.7155 DIAKEKRTPAPEPEP-p F5H2X7;T274-p DIAKEKRTPAPEPEP 0.164904495488496 0.0978541429161402 -0.225 0.297666666666667 15.6718027614748 13.3462525496627 -0.225 0.297666666666667 0.0270906686163691 0.0462780173997677 -3.00542360996202 2.57219456616903 F5H2X7 CIZ1 F5H2X7.T274.p_CIZ1 F5H2X7_T274t _1_1_274_274 F5H2X7 F5H2X7|Q9ULV3|Q5SYW2|Q9ULV3-2|Q9ULV3-4|Q9BTG3|Q9ULV3-3|Q9ULV3-5 Cip1-interacting zinc finger protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12002.12002.4 20.17 15.57 9.697 2 1 1 0 751.643 2923.5802 T274t TMT10 271 (K) EKRtPAPEPEPCEASELPAK (R) EKRT(0.99)PAPEPEPCEAS(0.0)ELPAK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T CIZ1 107380.6 5 4 497.1 292.98 HUMAN 1 -15.6718 13.3463 DIAPPLVTPDEPKGS-p P45974;T623-p DIAPPLVTPDEPKGS 0.0805562451865894 0.0284058958503704 -0.353666666666667 0.289 23.3544148266903 20.9497842985343 -0.353666666666667 0.289 0.00461911226144808 0.00803566031987319 -4.63871421331498 4.08176136133888 P45974 USP5 P45974.T623.p_USP5 P45974_T623t _1_1_623_623 P45974 P45974|P45974-2 Ubiquitin carboxyl-terminal hydrolase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28909.28909.4 17.5 14.28 9.618 2 1 1 0 785.1548 3057.6396 T623t TMT10 604 (R) GTGLQPGEEELPDIAPPLVtPDEPK (G) GT(0.0)GLQPGEEELPDIAPPLVT(0.99)PDEPK K:TMT10,t:Phosphorylated T USP5 96697.4 1 2 3819.1 42.5 HUMAN 1 -23.3544 20.9498 DIARLTGSASTAKKI-p P18858;S417-p DIARLTGSASTAKKI 0.160339007442996 0.0819083153971727 0.241666666666667 -0.214 15.909673454993 14.4038444890798 0.241666666666667 -0.214 0.0256467686672302 0.0362756790734825 3.0508657880391 -2.76565402649589 P18858 LIG1 P18858.S417.p_LIG1 P18858_S417s _1_1_417_417 P18858 P18858|P18858-3|F5GZ28 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10153.10153.2 11.06 11.06 2.112 4 1 1 0 687.3756 1293.7778 S417s TMT10 414 (R) LTGsASTAK (K) LT(0.0)GS(0.99)AS(0.0)T(0.0)AK K:TMT10,s:Phosphorylated S LIG1 102361.8 1 12 302.1 376.44 HUMAN 1 15.9097 -14.4038 DIAYLLVYRKHPKYV-p Q9Y3Q7;Y277-p DIAYLLVYRKHPKYV 0.150283451076775 0.155558711850649 0.439333333333333 0.232333333333333 16.5880576785882 10.6265539786858 0.439333333333333 0.232333333333333 0.0219378585606577 0.0865654522192738 3.18193379456288 2.0899007109396 Q9Y3Q7 ADAM18 Q9Y3Q7.Y277.p_ADAM18 Q9Y3Q7_Y277y _1_1_277_277 Q9Y3Q7 Q9Y3Q7|Q9Y3Q7-2 Disintegrin and metalloproteinase domain-containing protein 18 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.17194.17246.4 10.48 1.29 10.483 3 1 1 0 682.3809 2646.5445 Y277y Hydrogen 261 (K) RDYLILRPHDIAYLLVyRK (H) RDY(0.0)LILRPHDIAY(0.0)LLVY(0.99)RK K:TMT10-Lys-Only,y:Phosphorylated Y ADAM18 85365.4 1 1 330.1 10.48 HUMAN 1 16.5881 10.6266 DIDENPASDFDDSGS-p Q96RS0;S438-p DIDENPASDFDDSGS 0.306820630007235 0.313925197348727 0.145333333333333 0.112333333333333 9.59615742198645 6.65032806419746 0.145333333333333 0.112333333333333 0.109744877432704 0.216255515906341 1.91162636436905 1.3992877468716 Q96RS0 TGS1 Q96RS0.S438.p_TGS1 Q96RS0_S438s _1_1_438_438 Q96RS0 Q96RS0 Trimethylguanosine synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28939.28939.3 19.43 19.43 1.137 4 1 1 0 1049.4944 3066.4944 S438s TMT10 427 (R) SHELDIDENPAsDFDDSGSLLGFK (Y) S(0.0)HELDIDENPAS(0.99)DFDDS(0.0)GS(0.0)LLGFK K:TMT10,s:Phosphorylated S TGS1 97473.9 4 5 1387.1 147.41 HUMAN 1 9.5962 6.6503 DIDNKEQSELDQDLD-p F5H4R6;S10-p DIDNKEQSELDQDLD 0.0939960834841436 0.023914889486267 -0.323 -0.382333333333333 21.8427907147545 22.1044397646737 -0.323 -0.382333333333333 0.00654215649271149 0.00615964982827198 -4.28607184405404 -4.34123411371915 F5H4R6 NAP1L1 F5H4R6.S10.p_NAP1L1 F5H4R6_S10s _1_1_10_10 F5H4R6 P55209|F5H4R6|F8W0J6|P55209-2 Nucleosome assembly protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31200.31264.5 24.04 24.04 13.714 3 1 1 0 927.0438 4551.2088 S10s Acetyl 2 (M) ADIDNKEQsELDQDLDDVEEVEEEETGEETKLK (A) ADIDNKEQS(0.99)ELDQDLDDVEEVEEEET(0.0)GEET(0.0)KLK K:TMT10,s:Phosphorylated S NAP1L1 44911.2 11 1 836.1 215.14 HUMAN 1 -21.8428 -22.1044 DIDSDEESEPKEQKS-p Q96DR7;S396-p DIDSDEESEPKEQKS 0.141525291296506 0.00780877039860147 -0.271666666666667 -0.605666666666667 17.361321983873 30.0728412027936 -0.271666666666667 -0.605666666666667 0.0183597938976024 0.000983367565282286 -3.33414257906933 -6.44406938490847 Q96DR7 ARHGEF26 Q96DR7.S396.p_ARHGEF26 Q96DR7_S392sS396s_2_2_392_396 Q96DR7 Q96DR7|Q96DR7-4|Q96DR7-3 Rho guanine nucleotide exchange factor 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14998.14998.4 9.41 9.41 1.23 3 2 2 0 842.9092 3208.6879 S392s S396s TMT10 387 (K) ALDIDsDEEsEPKEQKSDEK (I) ALDIDS(0.99)DEES(0.99)EPKEQKS(0.0)DEK K:TMT10,s:Phosphorylated S ARHGEF26 97914.4 1 18 478.1 300.31 HUMAN 1 -17.3613 -30.0728 DIDSFVPSKVAPAPA-p P10515;S395-p DIDSFVPSKVAPAPA 0.617930459986034 0.188049387814814 -0.103 0.171333333333333 3.88152835925851 9.54726292439977 -0.103 0.171333333333333 0.409116658989588 0.110987407632015 -0.894414843563385 1.90241971317257 P10515 DLAT P10515.S395.p_DLAT P10515_S395s _1_1_395_395 P10515 P10515|E9PEJ4 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20940.20940.3 11.22 11.22 11.219 2 1 1 0 515.9371 1465.8303 S395s TMT10 388 (K) DIDSFVPsK (V) DIDS(0.0)FVPS(0.99)K K:TMT10,s:Phosphorylated S DLAT 69508.9 1 4 2952.1 64.89 HUMAN 1 -3.8815 9.5473 DIDSSDESDIEEDID-p Q9P2I0;S423-p DIDSSDESDIEEDID 0.573276533538498 0.130632858899369 -0.104666666666667 0.180333333333333 4.44629617273273 11.6479553851877 -0.104666666666667 0.180333333333333 0.359228167383332 0.0684233701821738 -1.00153463760123 2.26894955664817 Q9P2I0 CPSF2 Q9P2I0.S423.p_CPSF2 Q9P2I0_S419sS420sS423s_3_3_419_423 Q9P2I0 Q9P2I0 Cleavage and polyadenylation specificity factor subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20023.20442.3 15.82 15.82 10.709 4 3 3 0 1081.7695 3003.3955 S419s S420s S423s TMT10 414 (K) EADIDssDEsDIEEDIDQPSAHK (T) EADIDS(0.99)S(0.99)DES(0.99)DIEEDIDQPS(0.0)AHK K:TMT10,s:Phosphorylated S CPSF2 89341 7 3 3554.1 48.31 HUMAN 1 -4.4463 11.648 DIEAPDVSLEGPEGK-p Q09666;S1170-p DIEAPDVSLEGPEGK 0.63340252847051 0.180813901510269 -0.113333333333333 0.143666666666667 3.69239493787524 9.76941766984337 -0.113333333333333 0.143666666666667 0.427327169534526 0.105452828489113 -0.857854140469732 1.94091226144405 Q09666 AHNAK Q09666.S1170.p_AHNAK Q09666_S1170s _1_1_1170_1170 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24891.24891.4 19.58 19.58 9.428 2 1 1 0 819.442 3194.7763 S1170s TMT10 1153 (K) ADVVVSGPKVDIEAPDVsLEGPEGK (L) ADVVVS(0.0)GPKVDIEAPDVS(0.99)LEGPEGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 51 1.1 4313.36 HUMAN 1 -3.6924 9.7694 DIEEDYTTDEDMVEG-p Q9UPP1;T706-p DIEEDYTTDEDMVEG 0.714354134547226 0.0494231953083551 0.0526666666666667 0.332333333333333 2.75456189176933 17.4703610198235 0.0526666666666667 0.332333333333333 0.530327088345458 0.0179045701094191 0.670104402616547 3.35321443136981 Q9UPP1 PHF8 Q9UPP1.T706.p_PHF8 Q9UPP1_T705tT706t_2_2_705_706 Q9UPP1 Q9UPP1|Q9UPP1-2|Q9UPP1-3|Q9UPP1-4 Histone lysine demethylase PHF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23425.23425.5 19.97 19.97 2.528 4 2 2 0 1018.6666 4929.365 T705t T706t TMT10 681 (R) AKPCSDPNRVREPGEVEFDIEEDYttDEDMVEGVEGK (L) AKPCS(0.0)DPNRVREPGEVEFDIEEDY(0.0)T(0.99)T(0.99)DEDMVEGVEGK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T PHF8 118946 5 30 376.1 336.84 HUMAN 1 2.7546 17.4704 DIEGLGETPPAKKLN-p Q8IXM2-2;T127-p DIEGLGETPPAKKLN 0.457030615102119 0.0975594444347541 0.110333333333333 -0.218666666666667 6.26478323866503 13.3643225524009 0.110333333333333 -0.218666666666667 0.236331535197821 0.0460858651537265 1.33159856629296 -2.57546716784192 Q8IXM2 C17orf49 Q8IXM2.2.T127.p_C17orf49 Q8IXM2-2_T127t _1_1_127_127 Q8IXM2-2 H0YIS7|Q8IXM2-3|F8W1H0|Q8IXM2-2 Isoform 2 of Chromatin complexes subunit BAP18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25426.25426.5 29.32 29.32 4.292 5 1 1 0 808.2181 3957.0907 T127t TMT10 100 (K) QKADVTLSALNDSDANSDVVDIEGLGEtPPAK (K) QKADVT(0.0)LS(0.0)ALNDS(0.0)DANS(0.0)DVVDIEGLGET(0.99)PPAK K:TMT10,t:Phosphorylated T BAP18 13957.6 2 6 617.1 261.02 HUMAN 1 6.2648 -13.3643 DIEPDLLTPRQEAVP-p Q8IWR0;T210-p DIEPDLLTPRQEAVP 0.390683136668508 0.303159717781689 0.130666666666667 0.119666666666667 7.54243386524007 6.84352782310967 0.130666666666667 0.119666666666667 0.176098887963789 0.2068460432407 1.55566839212917 1.43320769424256 Q8IWR0 ZC3H7A Q8IWR0.T210.p_ZC3H7A Q8IWR0_T210t _1_1_210_210 Q8IWR0 Q8IWR0 Zinc finger CCCH domain-containing protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20798.20798.3 14.74 14.74 5.937 2 1 1 0 743.3775 2148.1498 T210t TMT10 196 (K) ALNHSVEDIEPDLLtPR (Q) ALNHS(0.0)VEDIEPDLLT(0.99)PR t:Phosphorylated T ZC3H7A 112418.4 1 1 1628.1 125.68 HUMAN 1 7.5424 6.8435 DIFRMSNSFTAIAKL-p Q14D04;S355-p DIFRMSNSFTAIAKL 0.229401753870038 0.372983417455098 0.177 0.119666666666667 12.2889559274084 5.68197515078306 0.177 0.119666666666667 0.0590342985462788 0.270272889622047 2.38369466082773 1.22741836462969 Q14D04 VEPH1 Q14D04.S355.p_VEPH1 Q14D04_S355s _1_1_355_355 Q14D04 Q14D04|Q14D04-2 Ventricular zone-expressed PH domain-containing protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19952.19952.2 14.04 14.04 2.226 3 1 1 0 804.4168 1527.8605 S355s TMT10 352 (R) MSNsFTAIAK (L) MS(0.0)NS(0.99)FT(0.0)AIAK K:TMT10,s:Phosphorylated S VEPH1 95542.4 1 2 341.1 353.64 HUMAN 1 12.289 5.682 DIFSEVGSVVSFRLV-p Q9H0L4;S41-p DIFSEVGSVVSFRLV 0.928133198175071 0.021024006796026 0.0146666666666667 0.456333333333333 0.641838205374544 22.9399360145793 0.0146666666666667 0.456333333333333 0.86261335866125 0.00508166929424109 0.181455587177814 4.535180467087 Q9H0L4 CSTF2T Q9H0L4.S41.p_CSTF2T Q9H0L4_S41s _1_1_41_41 Q9H0L4 Q9H0L4 Cleavage stimulation factor subunit 2 tau variant HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31055.31055.3 17.51 17.51 3.46 3 1 1 0 584.2921 1670.8951 S41s TMT10 34 (K) DIFSEVGsVVSFR (L) DIFS(0.0)EVGS(0.99)VVS(0.0)FR s:Phosphorylated S CSTF2T 64663.7 2 1 2570.1 78.15 HUMAN 1 0.6418 22.9399 DIGSDNCSLADEEQT-p Q5TH69;S636-p DIGSDNCSLADEEQT 0.893330277811656 0.930980441078259 0.02 0.0153333333333333 0.95645929133171 0.437114948618006 0.02 0.0153333333333333 0.802331920617792 0.904249974399473 0.262920754208123 0.126029637882009 Q5TH69 ARFGEF3 Q5TH69.S636.p_ARFGEF3 Q5TH69_S632sS636s_2_2_632_636 Q5TH69 Q5TH69 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.11311.11311.3 18.39 18.39 3.409 5 2 2 0 818.9709 2294.9677 S632s S636s Hydrogen 625 (R) SDVSDIGsDNCsLADEEQTPR (D) S(0.0)DVS(0.0)DIGS(0.99)DNCS(0.99)LADEEQT(0.0)PR C:Carbamidomethylation,s:Phosphorylated S ARFGEF3 244013.5 6 14 618.1 260.46 HUMAN 1 0.9565 0.4371 DIGVVEESPEKGDEI-p Q7Z2Z1;S1001-p DIGVVEESPEKGDEI 0.279768059006979 0.0069207327469574 0.165666666666667 -0.667666666666667 10.451974293086 30.9638262982987 0.165666666666667 -0.667666666666667 0.0901161378510514 0.000800972065807504 2.06035505795615 -6.71971057538566 Q7Z2Z1 TICRR Q7Z2Z1.S1001.p_TICRR Q7Z2Z1_S1001s _1_1_1001_1001 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17027.17027.4 15.99 15.99 5.027 4 1 1 0 802.4065 3126.6319 S1001s TMT10 988 (R) SSDPGPDIGVVEEsPEKGDEISLRR (S) S(0.0)S(0.0)DPGPDIGVVEES(0.99)PEKGDEIS(0.0)LRR K:TMT10,s:Phosphorylated S TICRR 212850 1 8 238.1 417.32 HUMAN 1 10.452 -30.9638 DIHLDLPSNNNLVSK-p P18583-5;S1670-p DIHLDLPSNNNLVSK 0.26421550293066 0.0827930550446836 -0.173 0.192 10.9634245202192 14.3268248487279 -0.173 0.192 0.0801046169421099 0.0369247458794405 -2.14970284291961 2.75142659701527 P18583 SON P18583.5.S1670.p_SON P18583-5_S1670s _1_1_1670_1670 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-2|P18583-6 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25559.25559.4 17.06 11 3.095 3 1 1 0 864.4698 3374.8774 S1670s TMT10 1663 (K) DIHLDLPsNNNLVSKDTEEPLPVK (E) DIHLDLPS(0.99)NNNLVS(0.0)KDT(0.0)EEPLPVK K:TMT10,s:Phosphorylated S SON 267429.6 1 21 45.1 778.56 HUMAN 1 -10.9634 14.3268 DIIIFVGTPVQKLDL-p P46013;T1315-p DIIIFVGTPVQKLDL 0.357143599320454 0.0107551853040564 0.131333333333333 -0.676 8.31391594527688 27.5916819872253 0.131333333333333 -0.676 0.147437651833315 0.0017411324163627 1.68957750379207 -5.72343371839771 P46013 MKI67 P46013.T1315.p_MKI67 P46013_T1315t _1_1_1315_1315 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29359.29359.3 15.25 15.25 99 1 1 1 0 623.3623 1788.1035 T1315t TMT10 1308 (K) DIIIFVGtPVQK (L) DIIIFVGT(1.0)PVQK K:TMT10,t:Phosphorylated T MKI67 360912.4 6 38 5.1 1918.46 HUMAN 1 8.3139 -27.5917 DIIITPPTPTGMMLP-p R4GMY0;T44-p DIIITPPTPTGMMLP 0.776844378653103 0.354775081005393 -0.0393333333333334 0.092 2.10444956513745 5.96822451036069 -0.0393333333333334 0.0920000000000001 0.615963592817443 0.253033223948996 -0.531810877534756 1.2785982983497 R4GMY0 NotFound R4GMY0.T44.p_NotFound R4GMY0_T44t _1_1_44_44 R4GMY0 Q96GX8|R4GMY0|R4GN89 Uncharacterized protein C16orf74 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.32828.32828.3 25.51 25.51 2.742 3 1 1 0 875.1242 2543.3927 T44t TMT10 32 (K) HLDVPDIIITPPtPTGMMLPR (D) HLDVPDIIIT(0.0)PPT(0.99)PT(0.0)GMMLPR t:Phosphorylated T C16orf74 8500.5 17 1 4879.1 25.51 HUMAN 1 -2.1044 5.9682 DIKCPKVSVGAPDLS-p Q09666;S5386-p DIKCPKVSVGAPDLS 0.468752455569706 0.590819447560349 0.0966666666666667 -0.062 6.07231985321041 3.09250947312673 0.0966666666666667 -0.062 0.247040418672955 0.490624297999051 1.29743653654811 -0.73903461174962 Q09666 AHNAK Q09666.S5386.p_AHNAK Q09666_S5386s _1_1_5386_5386 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24016.24016.5 16.94 16.94 4.811 4 1 1 0 696.5942 3398.9739 S5386s TMT10 5382 (K) CPKVsVGAPDLSLEASEGSIKLPK (M) CPKVS(0.99)VGAPDLS(0.0)LEAS(0.0)EGS(0.0)IKLPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 134 1.1 4313.36 HUMAN 1 6.0723 -3.0925 DIKCQKISPEGKAKI-p P32780;S56-p DIKCQKISPEGKAKI 0.804235267767312 0.171969954114357 0.0383333333333333 0.164 1.82463871303616 10.0508944345384 0.0383333333333333 0.164 0.656955765957607 0.0988349521960662 0.469607027449615 1.98974471820792 P32780 GTF2H1 P32780.S56.p_GTF2H1 P32780_S56s _1_1_56_56 P32780 P32780 General transcription factor IIH subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8673.8673.3 8.31 8.31 99 1 1 1 0 605.3335 1734.0187 S56s TMT10 52 (K) CQKIsPEGK (A) CQKIS(1.0)PEGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GTF2H1 62372.8 1 2 4130.1 37.01 HUMAN 1 1.8246 10.0509 DIKEKLCYVALDFEQ-p P63261;Y218-p DIKEKLCYVALDFEQ 0.33602799006615 0.0358520383144296 0.159333333333333 0.350333333333333 8.83231420217986 19.4592285411598 0.159333333333333 0.350333333333333 0.130848449194367 0.0113260153499869 1.779336115394 3.76044610301061 P63261 ACTG1 P63261.Y218.p_ACTG1 P63261_Y218y _1_1_218_218 P63261 Q6S8J3|P60709|P63261 Actin, cytoplasmic 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.49747.49767.4 13.75 13.75 13.752 6 1 1 0 772.8832 3008.4997 Y218y TMT10 216 (K) LCyVALDFEQEMATAASSSSLEK (S) LCY(0.99)VALDFEQEMAT(0.0)AAS(0.0)S(0.0)S(0.0)S(0.0)LEK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y ACTG1 42134.4 1 7 1.1 138.33 HUMAN 1 8.8323 19.4592 DIKFGGPSPQYKRWG-p Q70EL1;S632-p DIKFGGPSPQYKRWG 0.123443650291058 0.0347846861506343 -0.272 -0.470333333333333 18.894744470591 19.6393904810586 -0.272 -0.470333333333333 0.012898094452432 0.0108657811081052 -3.64566273558343 -3.79851061986762 Q70EL1 USP54 Q70EL1.S632.p_USP54 Q70EL1_S632s _1_1_632_632 Q70EL1 Q70EL1|Q70EL1-7|Q70EL1-6 Inactive ubiquitin carboxyl-terminal hydrolase 54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15187.15187.2 10.1 6.14 5.955 2 1 1 0 759.8922 1438.8095 S632s TMT10 628 (K) FGGPsPQYK (R) FGGPS(0.99)PQY(0.0)K K:TMT10,s:Phosphorylated S USP54 189724.2 4 6 525.1 282.54 HUMAN 1 -18.8947 -19.6394 DIKLAGDSFIVSSEF-p Q9H5J8;S234-p DIKLAGDSFIVSSEF 0.145149798911593 0.846468040695068 -0.257666666666667 0.0223333333333334 17.1179249956094 1.0173471677095 -0.257666666666667 0.0223333333333334 0.0194181343001319 0.791161751465751 -3.28589734145471 0.278196673710379 Q9H5J8 TAF1D Q9H5J8.S234.p_TAF1D Q9H5J8_S234s _1_1_234_234 Q9H5J8 Q9H5J8 TATA box-binding protein-associated factor RNA polymerase I subunit D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29196.29196.3 13.85 13.85 5.888 3 1 1 0 644.9934 1853.0006 S234s TMT10 230 (K) LAGDsFIVSSEFPVR (L) LAGDS(0.99)FIVS(0.0)S(0.0)EFPVR s:Phosphorylated S TAF1D 32171.4 2 3 3161.1 58.98 HUMAN 1 -17.1179 1.0173 DIKRRLISPYKKKQR-p O14929;S361-p DIKRRLISPYKKKQR 0.677221317815015 0.0727534691703667 -0.0766666666666667 -0.231 3.1693621627379 15.1250153185238 -0.0766666666666667 -0.231 0.482018585270715 0.0307254652769937 -0.754606659208461 -2.90001919041345 O14929 HAT1 O14929.S361.p_HAT1 O14929_S361s _1_1_361_361 O14929 O14929|O14929-2 Histone acetyltransferase type B catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16010.16010.2 9.52 9.52 9.522 2 1 1 0 808.4935 1536.0128 S361s TMT10 359 (R) LIsPYKK (K) LIS(0.99)PY(0.0)KK K:TMT10,s:Phosphorylated S HAT1 49911.1 7 2 5086.1 23.14 HUMAN 1 -3.1694 -15.125 DIKSNNWSLEDVTAS-p Q14680;S356-p DIKSNNWSLEDVTAS 0.807190843839437 0.00194036235975101 0.0343333333333333 -1.03533333333333 1.79147843681765 42.4908081976623 0.0343333333333333 -1.03533333333333 0.661991108566564 5.635327757799e-05 0.462111725108551 -11.3104765852982 Q14680 MELK Q14680.S356.p_MELK Q14680_S356s _1_1_356_356 Q14680 Q14680|Q14680-6|Q14680-8|Q14680-2|Q14680-5|Q14680-4|Q14680-3 Maternal embryonic leucine zipper kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20337.20337.2 16.3 16.3 4.813 4 1 1 0 1052.5065 2024.0337 S356s TMT10 352 (K) SNNWsLEDVTASDK (N) S(0.0)NNWS(0.99)LEDVT(0.0)AS(0.0)DK K:TMT10,s:Phosphorylated S MELK 75553.6 4 3 1543.1 132.89 HUMAN 1 1.7915 -42.4908 DILKDPPSEANSIQS-p Q8N488;S123-p DILKDPPSEANSIQS 0.0429675904927284 0.00308513776692781 0.498 0.647333333333333 30.4093113269071 37.7253538235335 0.498 0.647333333333333 0.000910057571604476 0.00016883583018478 6.55763054777674 9.1538517201002 Q8N488 RYBP Q8N488.S123.p_RYBP Q8N488_S123sS127sS130s_3_3_123_130 Q8N488 Q8N488 RING1 and YY1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19497.19497.3 11.6 6.78 4.146 6 3 3 0 1072.1783 2974.63 S123s S127s S130s TMT10 115 (K) SDILKDPPsEANsIQsANATTK (T) S(0.0)DILKDPPS(0.99)EANS(0.99)IQS(0.99)ANAT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S RYBP 25049.3 3 8 2169.1 94.66 HUMAN 1 30.4093 37.7254 DILRNEDSGSETAYL-p Q49A88;S124-p DILRNEDSGSETAYL 0.704371473235441 0.954594550565174 0.0696666666666667 0.00733333333333336 2.86169635216435 0.287598944364327 0.0696666666666666 0.00733333333333335 0.517404694450118 0.935922968777932 0.692178495962353 0.0841946511713209 Q49A88 CCDC14 Q49A88.S124.p_CCDC14 Q49A88_S124s _1_1_124_124 Q49A88 Q49A88|J3QT39|Q49A88-5 Coiled-coil domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15551.15551.3 16.09 11.2 1.199 4 1 1 0 797.7071 2311.1363 S124s TMT10 117 (R) DILRNEDsGSETAYLENR (S) DILRNEDS(0.99)GS(0.0)ET(0.0)AY(0.0)LENR s:Phosphorylated S CCDC14 107269.8 3 2 1707.1 120.05 HUMAN 1 2.8617 0.2876 DILVRHQSFVLVGET-p O43143;S155-p DILVRHQSFVLVGET 0.765963295929894 0.877041528224484 -0.0423333333333333 -0.0173333333333333 2.22349420331551 0.800648259227342 -0.0423333333333334 -0.0173333333333333 0.599308696401538 0.831639625316407 -0.557746658525822 -0.223075986967493 O43143 DHX15 O43143.S155.p_DHX15 O43143_S155s _1_1_155_155 O43143 O43143 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15194.15194.3 20.88 20.88 13.655 3 1 1 0 662.0168 1904.0642 S155s TMT10 153 (R) HQsFVLVGETGSGK (T) HQS(0.99)FVLVGET(0.0)GS(0.0)GK K:TMT10,s:Phosphorylated S DHX15 91730 1 3 3048.1 62.17 HUMAN 1 -2.2235 -0.8006 DIMRRKDSAIQQQVA-p Q14204;S1230-p DIMRRKDSAIQQQVA 0.934121732880443 0.0816145430626413 0.0123333333333333 0.224666666666667 0.582244347893307 14.4284362719709 0.0123333333333333 0.224666666666667 0.874531717754084 0.0360708496951705 0.165535006387172 2.77020156464239 Q14204 DYNC1H1 Q14204.S1230.p_DYNC1H1 Q14204_S1230s _1_1_1230_1230 Q14204 Q14204 Cytoplasmic dynein 1 heavy chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16159.16159.4 19.45 20.16 99 1 1 1 0 657.1202 2545.4851 S1230s TMT10 1227 (R) RKDsAIQQQVANLQMK (I) RKDS(1.0)AIQQQVANLQMK K:TMT10,s:Phosphorylated S DYNC1H1 535136.6 5 4 1294.1 156.82 HUMAN 1 0.5822 14.4284 DINKELSTPDKVLIP-p Q5VTI5;T940-p DINKELSTPDKVLIP 0.682078728827876 0.00536518424997561 -0.0573333333333333 -0.608666666666667 3.11487922666905 32.9704261726479 -0.0573333333333334 -0.608666666666667 0.48810367477647 0.000504611777641387 -0.743650521830351 -7.37608427902422 Q5VTI5 NotFound Q5VTI5.T940.p_NotFound Q5VTI5_T940t _1_1_940_940 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18496.18496.2 11.69 11.69 1.106 2 1 1 0 1018.0592 1955.1577 T940t TMT10 937 (K) ELStPDKVLIPER (Y) ELS(0.0)T(0.99)PDKVLIPER K:TMT10,t:Phosphorylated T PLEKHA6 119745.7 4 30 52.1 743.36 HUMAN 1 -3.1149 -32.9704 DINTFLGTPVQKLDQ-p P46013;T1801-p DINTFLGTPVQKLDQ 0.542287423950179 0.0125557733612715 0.0833333333333333 -0.476 4.90405121495099 26.5181094199123 0.0833333333333333 -0.476 0.323291940867769 0.0022294054476375 1.08644530139251 -5.43150899808101 P46013 MKI67 P46013.T1801.p_MKI67 P46013_T1801t _1_1_1801_1801 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22886.22886.4 18.42 11.5 2.411 3 1 1 0 819.6911 3195.7639 T1801t TMT10 1794 (K) DINTFLGtPVQKLDQPGNLPGSNRR (L) DINT(0.0)FLGT(0.99)PVQKLDQPGNLPGS(0.0)NRR K:TMT10,t:Phosphorylated T MKI67 360912.4 2 57 5.1 1918.46 HUMAN 1 4.9041 -26.5181 DINTFVGTPVEKLDL-p P46013;T1923-p DINTFVGTPVEKLDL 0.858494501092491 0.00179199224373901 0.0383333333333333 -0.844666666666667 1.29156131108016 43.3032443206003 0.0383333333333333 -0.844666666666667 0.742752066690874 4.67385858449336e-05 0.345495087420363 -11.7217590018955 P46013 MKI67 P46013.T1923.p_MKI67 P46013_T1923t _1_1_1923_1923 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33734.33734.5 20.19 17.2 5.555 3 1 1 0 639.7582 3114.8018 T1923t TMT10 1916 (K) DINTFVGtPVEKLDLLGNLPGSK (R) DINT(0.0)FVGT(0.99)PVEKLDLLGNLPGS(0.0)K K:TMT10,t:Phosphorylated T MKI67 360912.4 4 63 5.1 1918.46 HUMAN 1 1.2916 -43.3032 DIPDDLNSIRAAPGE-p P55265-4;S508-p DIPDDLNSIRAAPGE 0.53128844186677 0.310023015744408 0.104333333333333 -0.113333333333333 5.08200068090821 6.7212110522802 0.104333333333333 -0.113333333333333 0.310312972822946 0.212754568630625 1.11906415058494 -1.41174431435117 P55265 ADAR P55265.4.S508.p_ADAR P55265-4_S508s _1_1_508_508 P55265-4 P55265-4|P55265-2|P55265-3|P55265-5 Isoform 4 of Double-stranded RNA-specific adenosine deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28436.28436.4 12.66 12.66 1.19 3 1 1 0 937.9394 3668.7455 S508s TMT10 487 (K) AGYVDFENGQWATDDIPDDLNsIRAAPGEFR (A) AGY(0.0)VDFENGQWAT(0.0)DDIPDDLNS(0.99)IRAAPGEFR s:Phosphorylated S ADAR 142147.5 1 6 584.1 265.43 HUMAN 1 5.082 -6.7212 DIPERGNTDKEDNAE-p Q8TD26;T1339-p DIPERGNTDKEDNAE 0.641944195497773 0.466050592228306 -0.0643333333333333 0.0693333333333334 3.59695202284743 4.42120018468387 -0.0643333333333333 0.0693333333333334 0.436822296478657 0.361309999834502 -0.83925743867226 0.996651550264061 Q8TD26 CHD6 Q8TD26.T1339.p_CHD6 Q8TD26_T1339t _1_1_1339_1339 Q8TD26 Q8TD26 Chromodomain-helicase-DNA-binding protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16300.16300.5 20.53 20.04 2.796 6 1 1 0 963.8887 4735.4316 T1339t TMT10 1319 (K) SLSAEQGVTDGTSDIPERGNtDKEDNAEDKVDGLQK (Q) S(0.0)LS(0.0)AEQGVT(0.0)DGT(0.0)S(0.0)DIPERGNT(0.99)DKEDNAEDKVDGLQK K:TMT10,t:Phosphorylated T CHD6 308259.4 1 4 1006.1 189.22 HUMAN 1 -3.597 4.4212 DIQDSSGSEAQSVKP-p Q9BZF1;S810-p DIQDSSGSEAQSVKP 0.171396449036957 0.503434362832322 0.264333333333333 -0.0716666666666667 15.2524801796438 3.99239960477812 0.264333333333333 -0.0716666666666667 0.0298367820597176 0.398804490262319 2.92593954606182 -0.91552165944852 Q9BZF1 OSBPL8 Q9BZF1.S810.p_OSBPL8 Q9BZF1_S807sS808sS810s_3_3_807_810 Q9BZF1 Q9BZF1|Q9BZF1-2|Q9BZF1-3 Oxysterol-binding protein-related protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15447.15447.4 12.4 12.4 4.761 9 3 3 0 827.6111 3067.522 S807s S808s S810s TMT10 796 (K) GYSSPEPDIQDssGsEAQSVKPSTR (R) GY(0.0)S(0.0)S(0.0)PEPDIQDS(0.99)S(0.99)GS(0.99)EAQS(0.0)VKPS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S OSBPL8 101821.3 3 12 1293.1 156.92 HUMAN 1 15.2525 -3.9924 DIQEDDESDSELEER-p J3KNW5;S324-p DIQEDDESDSELEER 0.394447650899696 0.0568300527456223 0.268666666666667 0.231 7.456641421027 16.5968737456017 0.268666666666667 0.231 0.179612210544082 0.0218933704384796 1.5407325650571 3.1812993326596 J3KNW5 NotFound J3KNW5.S324.p_NotFound J3KNW5_S324s _1_1_324_324 J3KNW5 J3KNW5|Q96AJ1|I3L3S9|Q96AJ1-2 Clusterin-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.12890.12914.3 23.02 23.02 2.343 5 1 1 0 1003.397 2928.2188 S324s TMT10 308 (K) SGSNDDSDIDIQEDDEsDSELEER (R) S(0.0)GS(0.0)NDDS(0.0)DIDIQEDDES(0.99)DS(0.0)ELEER s:Phosphorylated S CLUAP1 50255.7 1 1 3142.1 59.48 HUMAN 1 7.4566 16.5969 DIQIALPSGCYGRVA-p P33316;S164-p DIQIALPSGCYGRVA 0.384110837361105 0.579653169230169 -0.165333333333333 0.0606666666666667 7.69407781112259 3.1964734885676 -0.165333333333333 0.0606666666666667 0.170056101555535 0.479018902229589 -1.58204197531914 0.759932688751445 P33316 DUT P33316.S164.p_DUT P33316_S164s _1_1_164_164 P33316 P33316|H0YKI0 Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22295.22295.3 12.36 12.36 6.82 3 1 1 0 620.636 1779.9261 S164s TMT10 156 (K) TDIQIALPsGCYGR (V) T(0.0)DIQIALPS(0.99)GCY(0.0)GR C:Carbamidomethylation,s:Phosphorylated S DUT 26848 1 4 2301.1 89.12 HUMAN 1 -7.6941 3.1965 DIRDLFGSPKRKVLP-p Q6ZW33;S426-p DIRDLFGSPKRKVLP 0.091379469142163 0.0340474106016949 -0.492666666666667 -0.392666666666667 22.1145639060285 19.785126910874 -0.492666666666667 -0.392666666666667 0.00614530736310785 0.0105072074993086 -4.3481764156538 -3.82945295435724 Q6ZW33 MICALCL Q6ZW33.S426.p_MICALCL Q6ZW33_S426s _1_1_426_426 Q6ZW33 Q6ZW33 MICAL C-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22381.22381.3 13.69 9.18 99 1 1 1 0 562.6389 1605.9365 S426s TMT10 419 (K) DIRDLFGsPK (R) DIRDLFGS(1.0)PK K:TMT10,s:Phosphorylated S MICALCL 77561 1 1 6139.1 13.69 HUMAN 1 -22.1146 -19.7851 DISAKSNYNFEKPFL-p B5MDF5;Y172-p DISAKSNYNFEKPFL 0.114016248333261 0.0263581786161247 -0.783 0.530666666666667 19.6616775289237 21.4478241552599 -0.783 0.530666666666667 0.0108101631154335 0.00716502292800869 -3.8067159857899 4.1924993798351 B5MDF5 NotFound B5MDF5.Y172.p_NotFound B5MDF5_Y172y _1_1_172_172 B5MDF5 B5MDF5|P62826|B4DV51 GTP-binding nuclear protein Ran GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12366.12452.2 14.35 14.35 2.852 2 1 1 0 720.3524 1359.7309 Y172y TMT10 170 (K) SNyNFEK (P) S(0.0)NY(0.99)NFEK K:TMT10,y:Phosphorylated Y RAN 26394.9 2 2 56.1 40.69 HUMAN 1 -19.6617 21.4478 DISEGGESPVVQSDE-p Q96EV8;S316-p DISEGGESPVVQSDE 0.21671898036419 0.859610163387837 -0.216333333333333 -0.0183333333333333 12.7948327746881 0.925179248723376 -0.216333333333333 -0.0183333333333333 0.0525432246516043 0.808131573970254 -2.47416178148686 -0.254978806003584 Q96EV8 DTNBP1 Q96EV8.S316.p_DTNBP1 Q96EV8_S316sS321s_2_2_316_321 Q96EV8 Q96EV8|A6NFV8|A0A087WYP9|Q96EV8-3 Dysbindin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20740.20740.3 19.36 19.36 3.808 7 2 2 0 1230.5385 3529.6615 S316s S321s TMT10 309 (R) DISEGGEsPVVQsDEEEVQVDTALATSHTDR (E) DIS(0.0)EGGES(0.99)PVVQS(0.99)DEEEVQVDT(0.0)ALAT(0.0)S(0.0)HT(0.0)DR s:Phosphorylated S DTNBP1 39834.6 3 4 3472.1 50.17 HUMAN 1 -12.7948 -0.9252 DISEHTLSENDLEEL-p Q9UBU7;S470-p DISEHTLSENDLEEL 0.957810192524261 0.00354425123931495 0.00933333333333332 -0.896666666666667 0.363937452095841 36.568429956644 0.00933333333333333 -0.896666666666667 0.919615441036951 0.000220372299984177 0.105716848999387 -8.68993727984079 Q9UBU7 DBF4 Q9UBU7.S470.p_DBF4 Q9UBU7_S465sS470s_2_2_465_470 Q9UBU7 Q9UBU7 Protein DBF4 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22649.22649.5 14.74 14.74 1.12 4 2 2 0 855.8193 4115.1322 S465s S470s TMT10 456 (K) NKQECILDIsEHTLsENDLEELRVDHYK (C) NKQECILDIS(0.99)EHT(0.0)LS(0.99)ENDLEELRVDHY(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DBF4 77598.3 1 10 880.1 207.32 HUMAN 1 0.3639 -36.5684 DISKLQRTPGEEKIN-p P51114;T597-p DISKLQRTPGEEKIN 0.121783481194047 0.00172752646433129 -0.334333333333333 -0.848333333333333 19.0215306465639 43.7025629490822 -0.334333333333333 -0.848333333333333 0.0125269959017845 4.2632785107514e-05 -3.67203562454324 -11.928986832183 P51114 FXR1 P51114.T597.p_FXR1 P51114_T597t _1_1_597_597 P51114 P51114|B4DXZ6|P51114-3 Fragile X mental retardation syndrome-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6519.6519.3 12.14 6.69 99 1 1 1 0 532.6238 1515.8895 T597t TMT10 594 (K) LQRtPGEEK (I) LQRT(1.0)PGEEK K:TMT10,t:Phosphorylated T FXR1 70061.9 3 5 553.1 273.48 HUMAN 1 -19.0215 -43.7026 DISMEIDSPENMMRH-p Q16204;S254-p DISMEIDSPENMMRH 0.337887660812549 0.0822742118737495 0.133666666666667 0.206333333333333 8.7751115943116 14.3730444424192 0.132895837605415 0.206333333333333 0.132583304932692 0.0365338596264888 1.76943442953822 2.75996175338701 Q16204 CCDC6 Q16204.S254.p_CCDC6 Q16204_S254s _1_1_254_254 Q16204 Q16204 Coiled-coil domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23842.23842.2 17.95 14.5 5.851 2 1 1 0 988.9226 1896.8703 S254s TMT10 247 (R) DISMEIDsPENMMR (H) DIS(0.0)MEIDS(0.99)PENMMR s:Phosphorylated S CCDC6 53461.2 9 6 423.1 319.68 HUMAN 1 8.7751 14.373 DISRHHNSTAELQKA-p P33527-9;S940-p DISRHHNSTAELQKA 0.843397882914353 0.626379860698043 -0.033 0.089 1.43215450402641 2.7638048033048 -0.033 0.089 0.719092153000795 0.529199615133005 -0.379022995725908 0.671925920904901 P33527 ABCC1 P33527.9.S940.p_ABCC1 P33527-9_S940s _1_1_940_940 P33527-9 P33527-9|P33527-3|P33527-2|P33527-4|P33527-5|P33527-7|P33527-6|P33527-8|A0A0A0MS99 Isoform 9 of Multidrug resistance-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5766.5766.4 14.72 14.72 1.288 2 1 1 0 583.5664 2251.2762 S940s TMT10 937 (R) HHNsTAELQKAEAK (K) HHNS(0.99)T(0.0)AELQKAEAK K:TMT10,s:Phosphorylated S ABCC1 174063.4 14 5 3098.1 60.69 HUMAN 1 -1.4322 2.7638 DITDCPRTPDTPNND-p Q16513;T121-p DITDCPRTPDTPNND 0.757981910149764 0.710239341293021 -0.0443333333333333 -0.0413333333333333 2.3035910192994 2.04340227957797 -0.0443333333333333 -0.0413333333333333 0.588356963712287 0.624683121888494 -0.575032089554864 -0.518331811398688 Q16513 PKN2 Q16513.T121.p_PKN2 Q16513_T121t _1_1_121_121 Q16513 Q16513|Q16513-2|Q16513-3|B1AL79 Serine/threonine-protein kinase N2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20465.20465.5 28.18 23.08 2.07 4 1 1 0 768.3666 3757.8289 T121t TMT10 100 (K) LQELNAHIVVSDPEDITDCPRtPDTPNNDPR (C) LQELNAHIVVS(0.0)DPEDIT(0.0)DCPRT(0.99)PDT(0.0)PNNDPR C:Carbamidomethylation,t:Phosphorylated T PKN2 112888.4 2 3 389.1 332.6 HUMAN 1 -2.3036 -2.0434 DITEEIMSGARTAST-p Q04637-9;S205-p DITEEIMSGARTAST 0.780995115911564 0.289358531057186 0.0463333333333333 -0.179333333333333 2.06222354937908 7.10643105866582 0.0463333333333333 -0.179333333333333 0.621981754470349 0.1946959394953 0.522538217106861 -1.47921592744704 Q04637 EIF4G1 Q04637.9.S205.p_EIF4G1 Q04637-9_S205s _1_1_205_205 Q04637-9 Q04637-9|Q04637-8 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17026.17026.4 7.54 7.54 7.542 2 1 1 0 682.1002 2645.4081 S205s TMT10 189 (R) IRDPNQGGKDITEEIMsGAR (T) IRDPNQGGKDIT(0.0)EEIMS(0.99)GAR K:TMT10,s:Phosphorylated S EIF4G1 176975.4 1 4 107.1 585.61 HUMAN 1 2.0622 -7.1064 DITELEDSFSKQVKS-p A0A1W2PR28;S463-p DITELEDSFSKQVKS 0.40432432080318 0.214433477485812 -0.132333333333333 -0.17 7.26318031464131 8.79680531878372 -0.132333333333333 -0.17 0.187794110719253 0.131922680830361 -1.50700744130897 -1.77256764939268 A0A1W2PR28 NotFound A0A1W2PR28.S463.p_NotFound A0A1W2PR28_S463s_1_1_463_463 A0A1W2PR28 Q5JU85-2|A0A1W2PR28|Q5JU85-3 IQ motif and SEC7 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.29652.29652.4 23.34 23.34 3.189 11 1 1 0 1070.9846 4199.9603 N455n S463s TMT10 429 (R) GLPYGGSCGGGIDGGGSSVTTSGEFSnDITELEDsFSK (Q) GLPY(0.0)GGS(0.0)CGGGIDGGGS(0.0)S(0.0)VT(0.0)T(0.0)S(0.0)GEFS(0.0)N(1.0)DIT(0.0)ELEDS(0.99)FS(0.0)K C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S IQSEC2 128893.2 2 5 1275.1 159.32 HUMAN 1 -7.2632 -8.7968 DIYFDSDSEDEDRAV-p Q56P03;S111-p DIYFDSDSEDEDRAV 0.916056654296661 0.00390851163108543 -0.033 0.787333333333333 0.744808105064972 35.5337440875018 -0.033 0.787333333333333 0.842401612503403 0.000279656933527257 -0.208581459780948 8.29279345936718 Q56P03 EAPP Q56P03.S111.p_EAPP Q56P03_S111s _1_1_111_111 Q56P03 Q56P03|A0A087X060 E2F-associated phosphoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20742.20742.4 18.64 18.64 1.196 8 1 1 0 977.7124 3827.8652 S111s TMT10 94 (K) VATAPTRYYDDIYFDSDsEDEDRAVQVTK (K) VAT(0.0)APT(0.0)RY(0.0)Y(0.0)DDIY(0.0)FDS(0.0)DS(0.99)EDEDRAVQVT(0.0)K K:TMT10,s:Phosphorylated S EAPP 33218.1 2 2 2556.1 78.72 HUMAN 1 -0.7448 35.5337 DKAICGLTPGRRYRN-p Q02241;T450-p DKAICGLTPGRRYRN 0.258247410038335 0.0174462313929159 0.254666666666667 -0.362 11.170676252048 24.2344851720843 0.254666666666667 -0.362 0.0763716853837569 0.00377182454892831 2.18603772238109 -4.84666258121913 Q02241 KIF23 Q02241.T450.p_KIF23 Q02241_T450t _1_1_450_450 Q02241 Q02241|H7BYN4|Q02241-2|Q02241-3 Kinesin-like protein KIF23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9386.9386.3 12.23 12.23 99 1 1 1 0 470.5808 1329.7623 T450t TMT10 445 (K) AICGLtPGRR (Y) AICGLT(1.0)PGRR C:Carbamidomethylation,t:Phosphorylated T KIF23 111083.9 2 6 352.1 350.35 HUMAN 1 11.1707 -24.2345 DKASKMSSPETDEEI-p Q6UWZ7;S387-p DKASKMSSPETDEEI 0.367895388273898 0.0045642445280084 0.132 0.618 8.0536715276153 34.2872212762578 0.132 0.618 0.15654270977307 0.000372630047938896 1.64446993576005 7.83546655226109 Q6UWZ7 FAM175A Q6UWZ7.S387.p_FAM175A Q6UWZ7_S386sS387sT390t_3_3_386_390 Q6UWZ7 Q6UWZ7|D6REL5|Q6UWZ7-2 BRCA1-A complex subunit Abraxas 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15425.15425.2 7.67 7.67 2.718 4 3 3 0 1304.5776 2368.2521 S386s S387s T390t TMT10 382 (K) ASKMssPEtDEEIEK (M) AS(0.0)KMS(0.99)S(0.99)PET(0.99)DEEIEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T ABRAXAS1 47061.3 1 6 2650.1 75.21 HUMAN 1 8.0537 34.2872 DKCNREPSKGRGRAT-p Q02040;S584-p DKCNREPSKGRGRAT 0.019376665224519 0.00423666321237395 0.766 0.6 40.0837563038904 34.8938593093645 0.766 0.6 9.80899175783076e-05 0.000324051524598278 10.1927206202859 8.05522083152389 Q02040 AKAP17A Q02040.S584.p_AKAP17A Q02040_S584s _1_1_584_584 Q02040 Q02040 A-kinase anchor protein 17A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3033.3033.4 9.09 9.09 99 1 1 1 0 411.2127 1561.8633 S584s TMT10 579 (K) CNREPsKGR (G) CNREPS(1.0)KGR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AKAP17A 81361.6 4 4 1803.1 114.1 HUMAN 1 40.0838 34.8939 DKDAQRLSPIPEEVP-p Q96T23;S604-p DKDAQRLSPIPEEVP 0.902776256738348 0.0520095074551121 0.0213333333333333 0.269333333333333 0.872715682472146 17.135097964066 0.0213333333333333 0.269333333333333 0.817953154719574 0.0193415022938483 0.241638511998599 3.28676163687853 Q96T23 RSF1 Q96T23.S604.p_RSF1 Q96T23_S604s _1_1_604_604 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16053.16053.2 15.89 10.83 99 1 1 1 0 1059.0735 2037.1745 S604s TMT10 599 (K) DAQRLsPIPEEVPK (S) DAQRLS(1.0)PIPEEVPK K:TMT10,s:Phosphorylated S RSF1 165358.1 15 8 39.1 857.38 HUMAN 1 0.8727 17.1351 DKDCNESTDNDELED-p Q9Y2K1;T356-p DKDCNESTDNDELED 0.234381279697054 0.165307708711247 0.334 -0.373 12.0788813885838 10.2801046624002 0.334 -0.373 0.0619600644938158 0.0937539412508581 2.34633377868116 -2.02957220745298 Q9Y2K1 ZBTB1 Q9Y2K1.T356.p_ZBTB1 Q9Y2K1_S355sT356t_2_2_355_356 Q9Y2K1 Q9Y2K1|Q9Y2K1-2 Zinc finger and BTB domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20399.20399.3 14.19 14.19 6.596 4 2 2 0 1222.1719 3504.5637 S355s T356t TMT10 347 (K) VTDKDCNEstDNDELEDEPEEPFYR (Y) VT(0.0)DKDCNES(0.99)T(0.99)DNDELEDEPEEPFY(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T ZBTB1 84068.6 2 2 3313.1 54.23 HUMAN 1 12.0789 -10.2801 DKDDLDVTELTNEDL-p P42166;T113-p DKDDLDVTELTNEDL 0.696853109927181 0.0659855977743623 0.071 -0.452 2.94674284790914 15.7063695370147 0.071 -0.452 0.507371087329268 0.0268759018443416 0.709574256939259 -3.0099324158284 P42166 TMPO P42166.T113.p_TMPO P42166_T113t _1_1_113_113 P42166 P42166|P42167|G5E972|P42167-2|P42167-3 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.33674.33674.4 13.74 13.74 1.222 2 1 1 0 864.6982 3375.7986 T113t TMT10 104 (R) QEDKDDLDVtELTNEDLLDQLVK (Y) QEDKDDLDVT(0.99)ELT(0.0)NEDLLDQLVK K:TMT10,t:Phosphorylated T TMPO 76061.2 2 5 123.1 546.19 HUMAN 1 2.9467 -15.7064 DKDDSLGSQQTNEQC-p P23497-4;S231-p DKDDSLGSQQTNEQC 0.906426058670281 0.00179199224373901 0.0203333333333333 0.845 0.837279141552346 43.2953191530721 0.0203333333333333 0.845 0.824654599981983 4.68239540257378e-05 0.232548333853156 11.7176804883586 P23497 SP100 P23497.4.S231.p_SP100 P23497-4_S231s _1_1_231_231 P23497-4 P23497-4|P23497-3|P23497-2|P23497-5|E9PHV6|P23497-6|P23497-7 Isoform Sp100-C of Nuclear autoantigen Sp-100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6466.6466.5 16.27 16.27 1.279 6 1 1 0 748.1785 3656.8956 S231s TMT10 218 (K) RKDTTSDKDDSLGsQQTNEQCAQK (A) RKDT(0.0)T(0.0)S(0.0)DKDDS(0.0)LGS(0.99)QQT(0.0)NEQCAQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SP100 103285 3 6 542.1 276.37 HUMAN 1 0.8373 43.2953 DKDEDAASLGSQKGG-p Q9BZ29-4;S167-p DKDEDAASLGSQKGG 0.247942065088286 0.0398604091984123 -0.258333333333333 0.288333333333333 11.5700726762145 18.7656142857009 -0.258333333333333 0.288333333333333 0.0696614856639524 0.0132873560147856 -2.25630124621701 3.61578239403117 Q9BZ29 DOCK9 Q9BZ29.4.S167.p_DOCK9 Q9BZ29-4_S167sS170s_2_2_167_170 Q9BZ29-4 A0A0A0MSY4|Q9BZ29-4|A0A088AWN3|Q9BZ29-5|Q9BZ29-3 Isoform 4 of Dedicator of cytokinesis protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22459.22459.5 16.31 9.58 1.103 4 2 2 0 861.8428 4145.2424 S167s S170s TMT10 148 (K) LPVHVYEVDEEVDKDEDAAsLGsQKGGITK (H) LPVHVY(0.0)EVDEEVDKDEDAAS(0.99)LGS(0.99)QKGGIT(0.0)K K:TMT10,s:Phosphorylated S DOCK9 241123.4 1 6 1592.1 129.29 HUMAN 1 -11.5701 18.7656 DKDEGIGSPDIWEDE-p Q01664;S139-p DKDEGIGSPDIWEDE 0.247048592039774 0.963448536010751 -0.191 0.00633333333333334 11.6062788793087 0.230830964037183 -0.191 0.00633333333333333 0.0690831468342885 0.948237013552736 -2.26268773669632 0.0679814233655581 Q01664 TFAP4 Q01664.S139.p_TFAP4 Q01664_S139s _1_1_139_139 Q01664 Q01664 Transcription factor AP-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17742.17742.5 22.84 16.3 99 1 1 1 0 708.9556 3460.7799 S139s TMT10 130 (R) AEDKDEGIGsPDIWEDEKAEDLRR (E) AEDKDEGIGS(1.0)PDIWEDEKAEDLRR K:TMT10,s:Phosphorylated S TFAP4 38839 3 3 1820.1 112.81 HUMAN 1 -11.6063 0.2308 DKDEYTFSPGKSKAT-p Q02880;S1424-p DKDEYTFSPGKSKAT 0.0684521497222417 0.0807578568881726 -0.462 -0.514 25.0976316051901 14.4931160601297 -0.462 -0.514 0.00309198116328502 0.0355376244843954 -5.06854643631183 -2.7821734601368 Q02880 TOP2B Q02880.S1424.p_TOP2B Q02880_S1424s _1_1_1424_1424 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15256.15256.2 13.64 13.64 2.873 3 1 1 0 791.3837 1501.7939 S1424s TMT10 1419 (K) DEYTFsPGK (S) DEY(0.0)T(0.0)FS(0.99)PGK K:TMT10,s:Phosphorylated S TOP2B 184233.7 4 35 71.1 658.36 HUMAN 1 -25.0976 -14.4931 DKDGIPVSSEAERHE-p Q9Y282-3;S116-p DKDGIPVSSEAERHE 0.45231308661418 0.409375565038376 -0.331333333333333 0.0923333333333333 6.35622229033365 5.16124836161857 -0.331333333333333 0.0923333333333334 0.231407681421494 0.304701901065852 -1.34778265522697 1.13329189592712 Q9Y282 ERGIC3 Q9Y282.3.S116.p_ERGIC3 Q9Y282-3_S116s _1_1_116_116 Q9Y282-3 Q9Y282-3 Isoform 3 of Endoplasmic reticulum-Golgi intermediate compartment protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12621.12621.4 7.2 7.2 1.1 2 1 1 0 566.2939 2182.1868 S116s TMT10 111 (K) DGIPVsSEAERHELGK (V) DGIPVS(0.99)S(0.0)EAERHELGK K:TMT10,s:Phosphorylated S ERGIC3 44341.8 2 1 4669.1 28.2 HUMAN 1 -6.3562 5.1612 DKDGQTDSAAEESSS-p P55201-2;S866-p DKDGQTDSAAEESSS 0.151941812319278 0.0133061434248685 0.244333333333333 0.424666666666667 16.4790666933436 26.0949619919118 0.244333333333333 0.424666666666667 0.0224953798365508 0.00245755813889744 3.160725116151 5.31952882126012 P55201 BRPF1 P55201.2.S866.p_BRPF1 P55201-2_S866s _1_1_866_866 P55201-2 P55201-2|P55201-3|P55201-4 Isoform 2 of Peregrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8887.8887.4 27.63 27.63 2.551 9 1 1 0 965.4534 3778.8281 S866s TMT10 849 (R) GSLTPHPAACDKDGQTDsAAEESSSQETSK (G) GS(0.0)LT(0.0)PHPAACDKDGQT(0.0)DS(0.99)AAEES(0.0)S(0.0)S(0.0)QET(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRPF1 139837.6 3 8 723.1 237.03 HUMAN 1 16.4791 26.095 DKDKSRDSLAPGPEP-p O15013;S1232-p DKDKSRDSLAPGPEP 0.0511487796737011 0.438228082651419 -0.930666666666667 0.112666666666667 28.2904116002787 4.77392039410009 -0.930666666666667 0.112666666666667 0.00148237758694313 0.333125563182439 -5.9283763488602 1.06225361977677 O15013 ARHGEF10 O15013.S1232.p_ARHGEF10 O15013_S1232s _1_1_1232_1232 O15013 O15013|O15013-6|O15013-5|O15013-4|O15013-7 Rho guanine nucleotide exchange factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9245.9245.3 17.31 17.31 2.375 2 1 1 0 803.0567 2327.1879 S1232s TMT10 1229 (K) SRDsLAPGPEPQDEDQK (D) S(0.0)RDS(0.99)LAPGPEPQDEDQK K:TMT10,s:Phosphorylated S ARHGEF10 152807 1 3 2315.1 88.25 HUMAN 1 -28.2904 4.7739 DKDPAKESPKPEEQK-p Q15911;S3418-p DKDPAKESPKPEEQK 0.744690566487893 0.456006865977639 -0.0456666666666667 0.071 2.42815960513746 4.54709979990736 -0.0456666666666667 0.0710000000000001 0.571720861537661 0.350986182789814 -0.601663718252264 1.02017599762723 Q15911 ZFHX3 Q15911.S3418.p_ZFHX3 Q15911_S3418s _1_1_3418_3418 Q15911 Q15911|Q15911-2 Zinc finger homeobox protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12193.12193.5 14.38 15.03 3.822 4 1 1 0 828.4568 4058.2783 S3418s TMT10 3398 (K) ASQTPVPPGAPSPDKDPAKEsPKPEEQK (N) AS(0.0)QT(0.0)PVPPGAPS(0.0)PDKDPAKES(0.99)PKPEEQK K:TMT10,s:Phosphorylated S ZFHX3 409090.1 1 16 529.1 281.73 HUMAN 1 -2.4282 4.5471 DKDPVNKSGGKAKKK-p P62851;S26-p DKDPVNKSGGKAKKK 0.485069507227704 0.00195162346428314 -0.195 -1.232 5.78976261333009 42.3910333563401 -0.195 -1.232 0.26364754924302 5.76629244430073e-05 -1.24701951064352 -11.2609043552838 P62851 RPS25 P62851.S26.p_RPS25 P62851_S26s _1_1_26_26 P62851 P62851|E9PK60|E9PQK3 40S ribosomal protein S25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7543.7543.3 9.33 9.33 99 1 1 1 0 714.4085 2061.2474 S26s TMT10 19 (K) DKDPVNKsGGK (A) DKDPVNKS(1.0)GGK K:TMT10,s:Phosphorylated S RPS25 13798.9 3 1 5555.1 18.23 HUMAN 1 -5.7898 -42.391 DKDRDDRSFGRDRNR-p P23588;S183-p DKDRDDRSFGRDRNR 0.469852863982881 0.00663556839811996 -0.102333333333333 -0.517666666666667 6.05845806369215 31.3006557840189 -0.102333333333333 -0.517666666666667 0.247830180752621 0.000741198312016083 -1.29497072305214 -6.82637885539995 P23588 EIF4B P23588.S183.p_EIF4B P23588_S183s _1_1_183_183 P23588 E7EX17|P23588|P23588-2|F8VSC7 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9456.9456.5 8.32 7.04 99 1 1 1 0 655.1326 3191.667 S183s TMT10 166 (R) IRVDVADQAQDKDRDDRsFGRDR (N) IRVDVADQAQDKDRDDRS(1.0)FGRDR K:TMT10,s:Phosphorylated S EIF4B 69207 1 3 146.1 516.36 HUMAN 1 -6.0585 -31.3007 DKECKSLSPGKENVS-p Q9H307;S443-p DKECKSLSPGKENVS 0.421209322329371 0.371787912277586 -0.127666666666667 0.088 6.91459721031688 5.70103939520008 -0.127666666666667 0.088 0.203488691421604 0.269089071708518 -1.44605547024162 1.23083833444979 Q9H307 PNN Q9H307.S443.p_PNN Q9H307_S443s _1_1_443_443 Q9H307 Q9H307|Q9H307-2 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19318.19318.2 18 11.85 2.369 3 1 1 0 1236.6538 2392.3361 S443s TMT10 441 (K) SLsPGKENVSALDMEK (E) S(0.0)LS(0.99)PGKENVS(0.0)ALDMEK K:TMT10,s:Phosphorylated S PNN 81726.4 38 8 180.1 480.36 HUMAN 1 -6.9146 5.701 DKEDGRESPSYDTPS-p Q9Y6M7-13;S93-p DKEDGRESPSYDTPS 0.180476786072839 0.0884277851120673 0.262 -0.261333333333333 14.6688801532344 13.9409870867345 0.262 -0.261333333333333 0.0341280901006929 0.0403553660801086 2.81657698442577 -2.68049024476234 Q9Y6M7 SLC4A7 Q9Y6M7.13.S93.p_SLC4A7 Q9Y6M7-13_S93s _1_1_93_93 Q9Y6M7-13 Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-9|Q9Y6M7-2|Q9Y6M7-10|Q9Y6M7-14|Q9Y6M7-7|Q9Y6M7-8|E9PFN4|Q9Y6M7-12|A0A0A0MST8|Q9Y6M7-11 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.4387.4387.5 19.25 11.08 2.235 6 1 1 0 742.1829 3626.918 S93s TMT10 80 (R) RKDKESDKEDGREsPSYDTPSQR (V) RKDKES(0.0)DKEDGRES(0.99)PS(0.0)Y(0.0)DT(0.0)PS(0.0)QR K:TMT10,s:Phosphorylated S SLC4A7 128884.6 13 3 207.1 445.25 HUMAN 1 14.6689 -13.941 DKEGDRASEEGKQKG-p Q7Z6Z7;S2052-p DKEGDRASEEGKQKG 0.982084938755332 0.00298089814036961 -0.0123333333333333 0.748 0.156000645364815 37.9949956950067 -0.0123333333333334 0.748 0.964717008538496 0.000158672049180548 -0.0463195051756433 9.26510115831235 Q7Z6Z7 HUWE1 Q7Z6Z7.S2052.p_HUWE1 Q7Z6Z7_S2052s _1_1_2052_2052 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4567.4567.3 13.58 13.58 99 1 1 1 0 696.6915 2008.0914 S2052s TMT10 2045 (K) DKEGDRAsEEGK (Q) DKEGDRAS(1.0)EEGK K:TMT10,s:Phosphorylated S HUWE1 485818.9 3 22 11.1 1210.45 HUMAN 1 -0.156 37.995 DKEGLSESVRSSCTL-p Q6PHR2-4;S475-p DKEGLSESVRSSCTL 0.582575200829836 0.806176257054812 0.168666666666667 -0.0683333333333333 4.31999693874161 1.31034993300029 0.168666666666667 -0.0683333333333334 0.369828440465139 0.739545683726298 0.977824111025908 -0.349975498407877 Q6PHR2 ULK3 Q6PHR2.4.S475.p_ULK3 Q6PHR2-4_S475s _1_1_475_475 Q6PHR2-4 Q6PHR2-4|Q6PHR2-3 Isoform 4 of Serine/threonine-protein kinase ULK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19147.19147.3 15.43 13.8 2.219 3 1 1 0 791.7296 2293.2076 S475s TMT10 462 (R) WEADTLDKEGLSEsVR (S) WEADT(0.0)LDKEGLS(0.0)ES(0.99)VR K:TMT10,s:Phosphorylated S ULK3 55509.8 1 1 5911.1 15.43 HUMAN 1 4.32 -1.3103 DKELIDHSPKATPDN-p O43674;S182-p DKELIDHSPKATPDN 0.0883424240028702 0.089710293728115 -0.667666666666667 0.400666666666667 22.465362300394 13.8583006934495 -0.667666666666667 0.400666666666667 0.00566844281842651 0.041131062715995 -4.42916482105729 2.66535964487239 O43674 NDUFB5 O43674.S182.p_NDUFB5 O43674_S182s _1_1_182_182 O43674 O43674|E7EWP0|O43674-2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9453.9453.3 11.96 7.42 99 1 1 1 0 492.9334 1396.82 S182s TMT10 177 (K) ELIDHsPK (A) ELIDHS(1.0)PK K:TMT10,s:Phosphorylated S NDUFB5 21749.9 1 3 4798.1 26.48 HUMAN 1 -22.4654 13.8583 DKENGNNSPLPKYAT-p Q6P1L5;S449-p DKENGNNSPLPKYAT 0.108274227113564 0.011062276167043 -0.452666666666667 0.479 20.2827897561293 27.3941541122036 -0.452666666666667 0.479 0.00936959943218184 0.00182215194428216 -3.93990464389955 5.66886102500428 Q6P1L5 FAM117B Q6P1L5.S449.p_FAM117B Q6P1L5_S449s _1_1_449_449 Q6P1L5 Q6P1L5 Protein FAM117B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9782.9782.2 13.18 6.79 99 1 1 1 0 804.4154 1527.8531 S449s TMT10 444 (K) ENGNNsPLPK (Y) ENGNNS(1.0)PLPK K:TMT10,s:Phosphorylated S FAM117B 62537.3 3 12 492.1 293.79 HUMAN 1 -20.2828 27.3942 DKENINNTPKHFRKD-p Q15361;T115-p DKENINNTPKHFRKD 0.787952750145453 0.0216909765836911 0.0423333333333333 -0.470333333333333 1.99625235157733 22.7480366396987 0.0423333333333333 -0.470333333333333 0.631502050188263 0.00531124500949872 0.507971936769425 -4.49015703493532 Q15361 TTF1 Q15361.T115.p_TTF1 Q15361_T115t _1_1_115_115 Q15361 Q15361 Transcription termination factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7094.7094.2 9.18 5.19 99 1 1 1 0 734.3849 1387.7946 T115t TMT10 110 (K) ENINNtPK (H) ENINNT(1.0)PK K:TMT10,t:Phosphorylated T TTF1 103505.6 1 2 1295.1 156.82 HUMAN 1 1.9963 -22.748 DKENNDGSSEIGKAV-p Q9HAW4;S703-p DKENNDGSSEIGKAV 0.258855999857316 0.00100708685169879 -0.362333333333333 -1.90166666666667 11.1567328790473 52.2530243322434 -0.362333333333333 -1.90166666666667 0.0766172768455261 5.95247481774918e-06 -2.18359063830006 -17.2963560829842 Q9HAW4 CLSPN Q9HAW4.S703.p_CLSPN Q9HAW4_S703s _1_1_703_703 Q9HAW4 Q9HAW4|Q9HAW4-3|Q9HAW4-2 Claspin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10571.10571.3 15.39 15.39 1.127 2 1 1 0 807.3924 2340.1956 S703s TMT10 694 (K) EMDKENNDGsSEIGK (A) EMDKENNDGS(0.99)S(0.0)EIGK K:TMT10,s:Phosphorylated S CLSPN 151718.8 1 3 506.1 289.61 HUMAN 1 -11.1567 -52.253 DKENVELSPTTGHCN-p P21359;S2802-p DKENVELSPTTGHCN 0.35152970692666 0.0922826208742538 -0.314 0.356 8.43629551697534 13.6888655493666 -0.314 0.356 0.143341006059455 0.0427674587396766 -1.71077494668946 2.6344312588348 P21359 NF1 P21359.S2802.p_NF1 P21359_S2802s _1_1_2802_2802 P21359 P21359|P21359-6 Neurofibromin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7863.7863.3 20.69 20.69 3.544 4 1 1 0 689.6441 1986.9501 S2802s TMT10 2797 (K) ENVELsPTTGHCNSGR (T) ENVELS(0.99)PT(0.0)T(0.0)GHCNS(0.0)GR C:Carbamidomethylation,s:Phosphorylated S NF1 322961 1 16 437.1 312.53 HUMAN 1 -8.4363 13.6889 DKERARLSHGDRGTD-p Q92576;S1975-p DKERARLSHGDRGTD 0.885085103006421 0.00883040673117586 0.0503333333333333 -0.445333333333333 1.04671526972255 29.1113857058928 0.0503333333333333 -0.445333333333333 0.78582976210253 0.00122704765389305 0.285555757941853 -6.15687062640153 Q92576 PHF3 Q92576.S1975.p_PHF3 Q92576_S1975s _1_1_1975_1975 Q92576 Q92576|Q92576-2 PHD finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3357.3357.4 8.04 8.04 5.981 2 1 1 0 477.752 1828.019 S1975s TMT10 1972 (R) ARLsHGDRGTDGK (A) ARLS(0.99)HGDRGT(0.0)DGK K:TMT10,s:Phosphorylated S PHF3 231702.4 1 19 96.1 606.54 HUMAN 1 1.0467 -29.1114 DKERFARSDDEQSSA-p P27540;S77-p DKERFARSDDEQSSA 0.0533645830032159 0.172494449739508 -0.604 -0.221666666666667 27.6423509266757 10.032954318632 -0.604 -0.221666666666667 0.00172093674382042 0.0992440704002952 -5.74566300590305 -1.98662998086179 P27540 ARNT P27540.S77.p_ARNT P27540_S77s _1_1_77_77 P27540 P27540|P27540-4|P27540-3|A6NGV6 Aryl hydrocarbon receptor nuclear translocator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7469.7469.3 17.42 12.29 5.978 3 1 1 0 665.3142 1913.9605 S77s TMT10 74 (R) FARsDDEQSSADK (E) FARS(0.99)DDEQS(0.0)S(0.0)ADK K:TMT10,s:Phosphorylated S ARNT 87433.7 7 1 2751.1 71.84 HUMAN 1 -27.6424 -10.033 DKETNTETPAPSPTV-p Q8IX03-2;T895-p DKETNTETPAPSPTV 0.632763904312138 0.125809478342576 -0.110666666666667 0.160333333333333 3.70355022511211 11.8721556020786 -0.110666666666667 0.160333333333333 0.426230945531162 0.0649807081322446 -0.860021114385921 2.30854145027539 Q8IX03 WWC1 Q8IX03.2.T895.p_WWC1 Q8IX03-2_T895tS899s_2_2_895_899 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19848.19848.5 14.7 11.38 1.139 7 2 2 0 898.4658 4328.3618 T895t S899s TMT10 875 (K) ASPDMDGYPALKVDKETNTEtPAPsPTVVRPK (D) AS(0.0)PDMDGY(0.0)PALKVDKET(0.0)NT(0.0)ET(0.99)PAPS(0.99)PT(0.0)VVRPK K:TMT10,t:Phosphorylated T,s:Phosphorylated S WWC1 126701.1 8 24 312.1 370.85 HUMAN 1 -3.7036 11.8722 DKFIIPGSPAIISIR-p Q9Y5I4;S950-p DKFIIPGSPAIISIR 0.681659995508636 0.622167055101304 -0.071 -0.0523333333333333 3.12221230912368 2.80210682292065 -0.071 -0.0523333333333333 0.48728020487148 0.524552930596251 -0.745127543055965 -0.679831268300222 Q9Y5I4 PCDHAC2 Q9Y5I4.S950.p_PCDHAC2 Q9Y5I4_S950s _1_1_950_950 Q9Y5I4 Q9Y5I4|Q9H158|Q9Y5I3|Q9Y5I0 Protocadherin alpha-C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30274.30274.4 21.12 21.12 7.477 3 1 1 0 733.4128 2850.6493 S950s TMT10 935 (K) QSGPGELPDKFIIPGsPAIISIR (Q) QS(0.0)GPGELPDKFIIPGS(0.99)PAIIS(0.0)IR K:TMT10,s:Phosphorylated S PCDHAC2 110075.6 4 4 3056.1 61.99 HUMAN 1 -3.1222 -2.8021 DKFKGFCYVEFDEVD-p Q15056;Y86-p DKFKGFCYVEFDEVD 0.343568239873255 0.468623666130989 -0.166 0.07 8.61737739444464 4.38813548662899 -0.166 0.07 0.137487197828063 0.364071305698196 -1.7421291851731 0.990452316722943 Q15056 EIF4H Q15056.Y86.p_EIF4H Q15056_Y86y _1_1_86_86 Q15056 Q15056 Eukaryotic translation initiation factor 4H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28462.28462.3 18.57 18.57 15.68 2 1 1 0 749.3554 2166.0829 Y86y TMT10 83 (K) GFCyVEFDEVDSLK (E) GFCY(0.99)VEFDEVDS(0.0)LK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y EIF4H 27441.6 1 4 2065.1 99.65 HUMAN 1 -8.6174 4.3881 DKGDSLDSVEALIKK-p A0A0D9SGF6;S1479-p DKGDSLDSVEALIKK 0.625010568942101 0.132867178357594 -0.0926666666666667 0.162666666666667 3.7931189412475 11.5536607743865 -0.0926666666666667 0.162666666666667 0.417530404160199 0.0699252330627126 -0.877371630223774 2.25233229171642 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.S1479.p_SPTAN1 A0A0D9SGF6_S1479s _1_1_1479_1479 A0A0D9SGF6 A0A0D9SGF6|Q13813-2 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.28728.28728.4 15.68 11.83 4.199 3 1 1 0 766.1566 2981.6286 S1479s TMT10 1465 (R) EAFLNTEDKGDSLDsVEALIK (K) EAFLNT(0.0)EDKGDS(0.0)LDS(0.99)VEALIK K:TMT10,s:Phosphorylated S SPTAN1 288398.5 2 16 263.1 396.39 HUMAN 1 -3.7931 11.5537 DKGMRSETPPVPPPP-p P48634;T825-p DKGMRSETPPVPPPP 0.989051104038883 0.75742121149885 0.00233333333333333 0.03 0.0978525335114516 1.66642994221061 0.00233333333333332 0.03 0.977720557309915 0.681329205815791 0.0292409993342694 0.433546956047697 P48634 PRRC2A P48634.T825.p_PRRC2A P48634_T825t _1_1_825_825 P48634 P48634|P48634-3|P48634-2 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26775.26775.3 22.21 22.21 1.583 6 1 1 0 1280.3046 3758.9202 T825t TMT10 820 (K) GMRSEtPPVPPPPPYLASYPGFPENGAPGPPISR (F) GMRS(0.0)ET(0.99)PPVPPPPPY(0.0)LAS(0.0)Y(0.0)PGFPENGAPGPPIS(0.0)R t:Phosphorylated T PRRC2A 229315.4 38 14 36.1 882.05 HUMAN 1 0.0979 1.6664 DKGNGDASPDGRRRV-p Q99612;S192-p DKGNGDASPDGRRRV 0.140818172070489 0.110235548775255 0.324 -0.176 17.3995964962708 12.6451247065344 0.324 -0.176 0.0181986993517534 0.0543860514682529 3.34175791352514 -2.44601413597334 Q99612 KLF6 Q99612.S192.p_KLF6 Q99612_S192s _1_1_192_192 Q99612 Q99612|Q99612-2|Q99612-3 Krueppel-like factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4981.4981.3 13.98 11.09 7.637 4 1 1 0 876.4391 2547.3366 S192s TMT10 177 (R) SGTSGKPGDKGNGDAsPDGR (R) S(0.0)GT(0.0)S(0.0)GKPGDKGNGDAS(0.99)PDGR K:TMT10,s:Phosphorylated S KLF6 32548.7 4 3 3290.1 54.84 HUMAN 1 17.3996 -12.6451 DKGSLSLSPPLNKLK-p Q9H7X7;S137-p DKGSLSLSPPLNKLK 0.401888996729169 0.252037159142961 -0.219 0.129 7.30735261360673 7.88155599249766 -0.219 0.129 0.185893728680153 0.162871239218108 -1.51471362734223 1.61410317176548 Q9H7X7 IFT22 Q9H7X7.S137.p_IFT22 Q9H7X7_S137s _1_1_137_137 Q9H7X7 Q9H7X7 Intraflagellar transport protein 22 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21408.21614.3 7.29 7.29 1.333 3 1 1 0 550.9799 1570.9569 S137s TMT10 132 (K) GSLSLsPPLNK (L) GS(0.0)LS(0.0)LS(0.99)PPLNK K:TMT10,s:Phosphorylated S IFT22 21176.7 1 1 7210.1 7.29 HUMAN 1 -7.3074 7.8816 DKGSRPQSPRKGPQT-p Q96KQ4;S566-p DKGSRPQSPRKGPQT 0.0800225073400526 0.0044825839263387 0.575666666666667 -0.632666666666667 23.4308190451229 34.4628255632102 0.575666666666667 -0.632666666666667 0.00453856014915495 0.000357863531762948 4.65701766493565 -7.89854010855179 Q96KQ4 PPP1R13B Q96KQ4.S566.p_PPP1R13B Q96KQ4_S566s _1_1_566_566 Q96KQ4 Q96KQ4 Apoptosis-stimulating of p53 protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3110.3110.3 7.44 3.32 4.564 2 1 1 0 398.5381 1113.6326 S566s TMT10 561 (K) GSRPQsPR (K) GS(0.0)RPQS(0.99)PR s:Phosphorylated S PPP1R13B 120133.8 2 6 1161.1 171.12 HUMAN 1 23.4308 -34.4628 DKGTDSPSPPPLEET-p Q4AC94;S2020-p DKGTDSPSPPPLEET 0.425897058209722 0.851336641037526 0.127333333333333 0.0233333333333333 6.83076755255439 0.982821961353044 0.127333333333333 0.0233333333333333 0.207454683896596 0.797476334215874 1.43135622566506 0.269537442627053 Q4AC94 C2CD3 Q4AC94.S2020.p_C2CD3 Q4AC94_S2020s _1_1_2020_2020 Q4AC94 Q4AC94 C2 domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11422.11422.3 10.36 10.36 1.274 5 1 1 0 916.4467 2667.3626 S2020s TMT10 2011 (R) APDKGTDSPsPPPLEETSNGGR (M) APDKGT(0.0)DS(0.0)PS(0.99)PPPLEET(0.0)S(0.0)NGGR K:TMT10,s:Phosphorylated S C2CD3 262780.3 2 7 722.1 237.14 HUMAN 1 6.8308 0.9828 DKHDRRRSQSIEQES-p Q5VTL8;S527-p DKHDRRRSQSIEQES 0.829669417419994 0.0151097926258579 -0.0436666666666667 0.484666666666667 1.56039251679128 25.1897110756543 -0.0436666666666667 0.484666666666667 0.698169300452918 0.0030271148071447 -0.409086324062463 5.08557547061773 Q5VTL8 PRPF38B Q5VTL8.S527.p_PRPF38B Q5VTL8_S527sS529s_2_2_527_529 Q5VTL8 Q5VTL8|A0A0A0MRN0 Pre-mRNA-splicing factor 38B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3978.3978.3 12 12 6.268 3 2 2 0 665.3031 1833.9616 S527s S529s Hydrogen 525 (R) RRsQsIEQESQEK (Q) RRS(0.99)QS(0.99)IEQES(0.0)QEK K:TMT10-Lys-Only,s:Phosphorylated S PRPF38B 64695 12 7 2128.1 96.59 HUMAN 1 -1.5604 25.1897 DKHLGKISEDESSGL-p A0JNW5;S976-p DKHLGKISEDESSGL 0.454180425050792 0.543408214995881 -0.104 -0.058 6.32175960833639 3.56200595716088 -0.104 -0.058 0.233251281873205 0.440351423177922 -1.3416863416573 -0.832292594859307 A0JNW5 UHRF1BP1L A0JNW5.S976.p_UHRF1BP1L A0JNW5_S976s _1_1_976_976 A0JNW5 A0JNW5|A0A0C4DGH6 UHRF1-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16323.16323.3 16.33 16.33 1.254 4 1 1 0 843.7881 2449.3906 S976s TMT10 971 (K) HLGKIsEDESSGLVYK (S) HLGKIS(0.99)EDES(0.0)S(0.0)GLVY(0.0)K K:TMT10,s:Phosphorylated S UHRF1BP1L 165621.9 2 10 398.1 328.88 HUMAN 1 -6.3218 -3.562 DKINKSESVVYADIR-p O95297;S260-p DKINKSESVVYADIR 0.959190757243957 0.00372578897340773 -0.00900000000000001 -0.608 0.350849845928788 36.0431308040597 -0.00900000000000002 -0.608 0.922390912113343 0.00024870637618486 -0.102051415899836 -8.48626975392111 O95297 MPZL1 O95297.S260.p_MPZL1 O95297_S260s _1_1_260_260 O95297 O95297|O95297-2|O95297-4 Myelin protein zero-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16941.16941.3 11.4 5.24 1.167 3 1 1 0 678.0339 1952.1217 S260s TMT10 255 (K) INKSEsVVYADIR (K) INKS(0.0)ES(0.99)VVY(0.0)ADIR K:TMT10,s:Phosphorylated S MPZL1 29252.8 1 4 2618.1 76.62 HUMAN 1 -0.3508 -36.0431 DKIVIQKYHTVNGHN-p P09651;Y167-p DKIVIQKYHTVNGHN 0.191102046396083 0.390375163669093 0.357666666666667 0.0863333333333334 14.0461594202293 5.43149033951936 0.357666666666667 0.0863333333333334 0.0393898256017732 0.28631952576071 2.70139737868722 1.18231940519325 P09651 HNRNPA1 P09651.Y167.p_HNRNPA1 P09651_Y167y _1_1_167_167 P09651 P09651|P09651-2|F8W6I7|P09651-3 Heterogeneous nuclear ribonucleoprotein A1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.4305.4305.3 24.96 24.96 6.273 2 1 1 0 598.9367 1714.8281 Y167y TMT10 167 (K) yHTVNGHNCEVR (K) Y(0.99)HT(0.0)VNGHNCEVR C:Carbamidomethylation,y:Phosphorylated Y HNRNPA1 38860.1 4 1 7.1 110.22 HUMAN 1 14.0462 5.4315 DKIVLQKYHTINGHN-p P22626;Y174-p DKIVLQKYHTINGHN 0.330875085214081 0.0188946956839509 -0.248333333333333 -0.359333333333333 8.97673493359766 23.7143942623351 -0.248333333333333 -0.359333333333333 0.126568754556276 0.0042516800350877 -1.80433545412246 -4.7198694369696 P22626 HNRNPA2B1 P22626.Y174.p_HNRNPA2B1 P22626_Y174y _1_1_174_174 P22626 P22626|P22626-2|A0A087WUI2 Heterogeneous nuclear ribonucleoproteins A2/B1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.4884.4884.3 25.65 25.65 8.088 2 1 1 0 573.9421 1639.8502 Y174y TMT10 174 (K) yHTINGHNAEVR (K) Y(0.99)HT(0.0)INGHNAEVR y:Phosphorylated Y HNRNPA2B1 37486.1 4 1 2.1 134.47 HUMAN 1 -8.9767 -23.7144 DKKAIQASIRRNKET-p Q96D71;S751-p DKKAIQASIRRNKET 0.219002866960347 0.898329262868441 0.182 -0.0236666666666667 12.7063532910139 0.653080417038881 0.182 -0.0236666666666667 0.0536246747285491 0.860383272531287 2.45828554348684 -0.184422995625987 Q96D71 REPS1 Q96D71.S751.p_REPS1 Q96D71_S751s _1_1_751_751 Q96D71 Q96D71|Q96D71-3|Q96D71-4|E9PMG1 RalBP1-associated Eps domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6549.6549.3 7.61 5.9 99 1 1 1 0 408.565 1143.716 S751s TMT10 747 (K) AIQAsIRR (N) AIQAS(1.0)IRR s:Phosphorylated S REPS1 86831.7 1 36 226.1 425.21 HUMAN 1 12.7064 -0.6531 DKKDDKDSPKKNKGK-p A0A0A0MT26;S10-p DKKDDKDSPKKNKGK 0.0511487796737011 0.246323207685595 0.621333333333333 0.212333333333333 28.325608488561 8.01794256213051 0.621333333333333 0.212333333333333 0.00147041238197916 0.157835882838866 5.9384258466574 1.63775270364991 A0A0A0MT26 NotFound A0A0A0MT26.S10.p_NotFound A0A0A0MT26_S10s _1_1_10_10 A0A0A0MT26 A0A0A0MT26|P13637 Sodium/potassium-transporting ATPase subunit alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6311.6311.4 9.25 4.56 99 1 1 1 0 657.8805 2548.5319 S10s Acetyl 2 (M) GDKKDDKDsPKK (N) GDKKDDKDS(1.0)PKK K:TMT10,s:Phosphorylated S ATP1A3 135254.4 1 1 1313.2 155.17 HUMAN 1 28.3256 8.0179 DKKDRDASPSKEERK-p Q9BUQ8;S14-p DKKDRDASPSKEERK 0.60035042962897 0.0793118414432029 0.109666666666667 0.227333333333333 4.09311853948868 14.6058665480792 0.109666666666667 0.227333333333333 0.38966208144302 0.0346268786680067 0.934887953427077 2.80308229537998 Q9BUQ8 DDX23 Q9BUQ8.S14.p_DDX23 Q9BUQ8_S14s _1_1_14_14 Q9BUQ8 Q9BUQ8|Q9BUQ8-2 Probable ATP-dependent RNA helicase DDX23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10446.10446.4 11.73 11.73 2.962 2 1 1 0 625.0882 2417.3603 S14s Acetyl 2 (M) AGELADKKDRDAsPSK (E) AGELADKKDRDAS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S DDX23 95923.1 10 77 121.5 549.41 HUMAN 1 4.0931 14.6059 DKKENAGSLEAINEP-p Q5TCQ9;S701-p DKKENAGSLEAINEP 0.694555291282257 0.134182360081184 0.053 0.163333333333333 2.97013978767555 11.4964710119892 0.053 0.163333333333333 0.504645054139459 0.0708521280415356 0.714340800731877 2.24226346259348 Q5TCQ9 MAGI3 Q5TCQ9.S701.p_MAGI3 Q5TCQ9_S701s _1_1_701_701 Q5TCQ9 Q5TCQ9|Q5TCQ9-4|Q5TCQ9-2|Q5TCQ9-3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.33276.33482.3 22.75 22.75 16.076 2 1 1 0 1009.5144 2946.5596 S701s TMT10 697 (K) ENAGsLEAINEPIPQPMPFPPSIIR (S) ENAGS(0.99)LEAINEPIPQPMPFPPS(0.0)IIR s:Phosphorylated S MAGI3 166517.7 14 4 1019.1 188.04 HUMAN 1 2.9701 11.4965 DKKGRAVSWTFSEEN-p Q9Y320;S243-p DKKGRAVSWTFSEEN 0.431645876266157 0.00973090615143433 -0.115333333333333 -0.673 6.71834034693298 28.3243657349111 -0.115333333333333 -0.673 0.212895246811866 0.00147083320745805 -1.41161439356883 -5.92935656032061 Q9Y320 TMX2 Q9Y320.S243.p_TMX2 Q9Y320_S243s _1_1_243_243 Q9Y320 Q9Y320|Q9Y320-2 Thioredoxin-related transmembrane protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25338.25338.2 16.68 10.2 2.337 3 1 1 0 923.9514 1766.9275 S243s TMT10 241 (R) AVsWTFSEENVIR (E) AVS(0.99)WT(0.0)FS(0.0)EENVIR s:Phosphorylated S TMX2 34379.4 2 2 2316.1 88.11 HUMAN 1 -6.7183 -28.3244 DKKKEKKSLTPAVPV-p P20810-6;S216-p DKKKEKKSLTPAVPV 0.156450973477083 0.336606529268613 -0.435333333333333 0.232333333333333 16.1658460207407 6.2657531660969 -0.435333333333333 0.232333333333333 0.0241777230160703 0.236278760213646 -3.10009955019251 1.33144038666415 P20810 CAST P20810.6.S216.p_CAST P20810-6_S216s _1_1_216_216 P20810-6 P20810-6|P20810-7|P20810-10|P20810-5|A0A0C4DGB5|P20810-9|P20810-2 Isoform 6 of Calpastatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15965.15965.4 20.73 19.31 2.167 4 1 1 0 709.1617 2753.6583 S216s TMT10 216 (K) sLTPAVPVESKPDKPSGK (S) S(0.99)LT(0.0)PAVPVES(0.0)KPDKPS(0.0)GK K:TMT10,s:Phosphorylated S CAST 85340.8 1 7 314.1 369.19 HUMAN 1 -16.1658 6.2658 DKKKGGPSPGDVEAI-p P09661;S197-p DKKKGGPSPGDVEAI 0.579947184508717 0.387666485001344 0.0763333333333333 0.0896666666666667 4.35325785348443 5.47011601465176 0.0763333333333333 0.0896666666666667 0.367006887549341 0.283784321909928 0.984081075854282 1.1892944251503 P09661 SNRPA1 P09661.S197.p_SNRPA1 P09661_S197s _1_1_197_197 P09661 P09661 U2 small nuclear ribonucleoprotein A' HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12680.12680.4 12.72 11.01 99 1 1 1 0 595.6013 2299.4155 S197s TMT10 192 (K) KKGGPsPGDVEAIK (N) KKGGPS(1.0)PGDVEAIK K:TMT10,s:Phosphorylated S SNRPA1 28529.2 4 1 4330.1 33.39 HUMAN 1 4.3533 5.4701 DKKLEGNSPQGSNQG-p P61006;S181-p DKKLEGNSPQGSNQG 0.581576497520379 0.0166963636681182 -0.0806666666666667 -0.337666666666667 4.33169604603421 24.540743363465 -0.0806666666666667 -0.337666666666667 0.368833530239185 0.00351500270566807 -0.980025979181621 -4.9223965401164 P61006 RAB8A P61006.S181.p_RAB8A P61006_S181s _1_1_181_181 P61006 P61006 Ras-related protein Rab-8A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8822.8822.3 18.82 18.82 3.505 2 1 1 0 770.7528 2230.2759 S181s TMT10 176 (K) KLEGNsPQGSNQGVK (I) KLEGNS(0.99)PQGS(0.0)NQGVK K:TMT10,s:Phosphorylated S RAB8A 23838.9 3 8 2008.4 102.72 HUMAN 1 -4.3317 -24.5407 DKKLRCDSADLRHDI-p Q9NYF8;S690-p DKKLRCDSADLRHDI 0.932495418439431 0.0873027821454054 -0.014 0.217333333333333 0.599814957120493 14.0204212014002 -0.014 0.217333333333333 0.871000700499927 0.0396239603012107 -0.170246384524439 2.69504906828706 Q9NYF8 BCLAF1 Q9NYF8.S690.p_BCLAF1 Q9NYF8_S690s _1_1_690_690 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|Q9NYF8-4 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4650.4650.4 14.32 14.32 99 1 1 1 0 427.9359 1628.7558 S690s Hydrogen 688 (R) CDsADLRHDIDRR (R) CDS(1.0)ADLRHDIDRR C:Carbamidomethylation,s:Phosphorylated S BCLAF1 106234.3 9 36 10.1 1293.04 HUMAN 1 -0.5998 14.0204 DKKPKTDSPKSVASK-p Q92766;S1499-p DKKPKTDSPKSVASK 0.0502987961976786 0.0237387828429253 1.06533333333333 -0.648333333333333 28.6365457579997 22.1560407995287 1.06533333333333 -0.648333333333333 0.00136881710691086 0.0060868965401043 6.02777941358102 -4.35305797507414 Q92766 RREB1 Q92766.S1499.p_RREB1 Q92766_S1499s _1_1_1499_1499 Q92766 Q92766-2|A0A087X055|Q92766-4 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9050.9050.3 10.2 6.53 1.18 4 1 1 0 596.3361 1707.0256 S1499s TMT10 1497 (K) TDsPKSVASK (A) T(0.0)DS(0.99)PKS(0.0)VAS(0.0)K K:TMT10,s:Phosphorylated S RREB1 184269.8 4 27 179.1 480.48 HUMAN 1 28.6365 -22.156 DKKQNAQSSDESFEP-p Q8N554;S378-p DKKQNAQSSDESFEP 0.425455372410857 0.0268848782601585 -0.106333333333333 0.403333333333333 6.83675809495794 21.3168368762424 -0.106333333333333 0.403333333333333 0.207168723699727 0.00738441868230246 -1.43240722621406 4.16320393633838 Q8N554 ZNF276 Q8N554.S378.p_ZNF276 Q8N554_S378sS379s_2_2_378_379 Q8N554 Q8N554 Zinc finger protein 276 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12449.12449.4 7.63 7.63 7.63 4 2 2 0 747.6085 2827.4829 S378s S379s TMT10 373 (K) KQNAQssDESFEPYPERK (V) KQNAQS(0.99)S(0.99)DES(0.0)FEPY(0.0)PERK K:TMT10,s:Phosphorylated S ZNF276 68758.2 1 5 3532.1 48.89 HUMAN 1 -6.8368 21.3168 DKKRSYESANGRSED-p Q9Y383;S373-p DKKRSYESANGRSED 0.0354660797973718 0.654595241923678 0.623 0.114666666666667 33.7514679596499 2.51570789566924 0.623 0.114666666666667 0.000421553989795713 0.560311079773865 7.65985685794953 0.620126291518647 Q9Y383 LUC7L2 Q9Y383.S373.p_LUC7L2 Q9Y383_S373s _1_1_373_373 Q9Y383 Q96HJ9-2|Q9Y383|Q9Y383-2|Q9Y383-3 Putative RNA-binding protein Luc7-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4601.4601.2 12 12 3.677 3 1 1 0 596.764 1112.5534 S373s TMT10 370 (R) SYEsANGR (S) S(0.0)Y(0.0)ES(0.99)ANGR s:Phosphorylated S LUC7L2 46969.6 1 4 2533.1 79.6 HUMAN 1 33.7515 2.5157 DKKSSTVSEDVEATV-p Q8IWT6;S202-p DKKSSTVSEDVEATV 0.549643772444223 0.820926557626536 0.106 -0.028 4.79761049664111 1.19902387648985 0.106 -0.028 0.331313361108266 0.758748092651702 1.06683522833635 -0.323049714317604 Q8IWT6 LRRC8A Q8IWT6.S202.p_LRRC8A Q8IWT6_S202s _1_1_202_202 Q8IWT6 Q8IWT6 Volume-regulated anion channel subunit LRRC8A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25421.25421.3 7.94 6.69 2.191 5 1 1 0 720.0155 2078.0637 S202s TMT10 198 (K) SSTVsEDVEATVPMLQR (T) S(0.0)S(0.0)T(0.0)VS(0.99)EDVEAT(0.0)VPMLQR s:Phosphorylated S LRRC8A 95109.8 1 2 3842.1 41.84 HUMAN 1 4.7976 -1.199 DKKYLTASQLVPPDN-p P42356;S1424-p DKKYLTASQLVPPDN 0.909848578711958 0.333805150518442 0.0183333333333333 0.133333333333333 0.80564376892272 6.31545792329894 0.0183333333333333 0.133333333333333 0.830683574630454 0.233589979023996 0.22438957123204 1.34023645954419 P42356 NotFound P42356.S1424.p_NotFound P42356_S1424s _1_1_1424_1424 P42356 P42356|P42356-2 Phosphatidylinositol 4-kinase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21605.21605.3 11.58 11.58 2.395 4 1 1 0 709.6815 2047.0658 S1424s TMT10 1420 (K) YLTAsQLVPPDNQDTR (S) Y(0.0)LT(0.0)AS(0.99)QLVPPDNQDT(0.0)R s:Phosphorylated S PI4KA 239393.6 1 12 1109.1 176.13 HUMAN 1 0.8056 6.3155 DKLCSPLSEPGDPSK-p Q5VUA4;S2192-p DKLCSPLSEPGDPSK 0.846312859925951 0.0988355476810183 -0.0383333333333333 0.178333333333333 1.40256988653516 13.2861124373417 -0.0383333333333333 0.178333333333333 0.724007410420175 0.0469233225693 -0.372018497764703 2.56131051659719 Q5VUA4 ZNF318 Q5VUA4.S2192.p_ZNF318 Q5VUA4_S2192s _1_1_2192_2192 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18296.18296.3 14.51 14.51 2.78 3 1 1 0 642.3204 1844.9828 S2192s TMT10 2187 (K) LCSPLsEPGDPSK (C) LCS(0.0)PLS(0.99)EPGDPS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF318 252762.4 8 37 37.1 870.88 HUMAN 1 -1.4026 13.2861 DKLFFWNSKSTYIKS-p P21399;S638-p DKLFFWNSKSTYIKS 0.980753251188804 0.0985205467728746 0.00533333333333333 0.223666666666667 0.16730133722379 13.3053266885814 0.00533333333333334 0.223666666666667 0.9622100003927 0.0467161808618808 0.0496137992261536 2.56478658799772 P21399 ACO1 P21399.S638.p_ACO1 P21399_S638s _1_1_638_638 P21399 P21399 Cytoplasmic aconitate hydratase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.31631.31631.2 8.66 4.02 99 1 1 1 0 740.3948 1399.8138 S638s TMT10 633 (K) LFFWNsK (S) LFFWNS(1.0)K K:TMT10,s:Phosphorylated S ACO1 98910.6 1 1 6924.1 8.66 HUMAN 1 0.1673 13.3053 DKLFRQQSVPAASSY-p Q6UB99;S1814-p DKLFRQQSVPAASSY 0.107930259374796 0.387368896424247 0.349 0.127666666666667 20.3631674227479 5.47552686020886 0.349 0.127666666666667 0.00919778508653388 0.283430977104562 3.95732712767142 1.19027089638924 Q6UB99 ANKRD11 Q6UB99.S1814.p_ANKRD11 Q6UB99_S1814s _1_1_1814_1814 Q6UB99 Q6UB99 Ankyrin repeat domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22593.22593.4 20.17 18.78 2.177 6 1 1 0 955.2169 3737.8919 S1814s TMT10 1812 (R) QQsVPAASSYDSPMPPSMEDRAPLPPVPAEK (F) QQS(0.99)VPAAS(0.0)S(0.0)Y(0.0)DS(0.0)PMPPS(0.0)MEDRAPLPPVPAEK K:TMT10,s:Phosphorylated S ANKRD11 299790.8 1 20 340.1 353.72 HUMAN 1 20.3632 5.4755 DKLGEGTYATVYKGK-p Q00536-2;Y250-p DKLGEGTYATVYKGK 0.893977543443334 0.00123561176676881 0.027 -1.66166666666667 0.950497689540711 47.6194013171855 0.027 -1.66166666666667 0.803434045576279 1.73005483397205e-05 0.261414781183408 -14.1531093192804 Q00536 CDK16 Q00536.2.Y250.p_CDK16 Q00536-2_Y250y _1_1_250_250 Q00536-2 Q00536-2|Q00537|Q00537-2|Q00536-3|F5H6Z0|A0A087WZU2 Isoform 2 of Cyclin-dependent kinase 16 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.19002.19002.3 9.45 9.45 9.447 4 1 1 0 580.6407 1659.9358 Y250y TMT10 245 (K) LGEGTyATVYK (G) LGEGT(0.0)Y(0.99)AT(0.0)VY(0.0)K K:TMT10,y:Phosphorylated Y CDK16 63855.9 3 1 314.1 11.3 HUMAN 1 0.9505 -47.6194 DKLNTRWSQFRELVD-p A0A087WUZ3;S938-p DKLNTRWSQFRELVD 0.667412528016874 0.0117297467150433 0.082 0.544666666666667 3.28281672197186 26.9901719598182 0.082 0.544666666666667 0.4695894462173 0.00199978268624691 0.777292812244991 5.55846854038221 A0A087WUZ3 NotFound A0A087WUZ3.S938.p_NotFound A0A087WUZ3_S938s _1_1_938_938 A0A087WUZ3 A0A087WUZ3|Q01082|Q01082-2|Q01082-3 Spectrin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16977.16977.3 9.64 9.64 1.555 2 1 1 0 506.26 1436.796 S938s TMT10 933 (K) LNTRWsQFR (E) LNT(0.0)RWS(0.99)QFR s:Phosphorylated S SPTBN1 275623.3 1 2 233.1 420.49 HUMAN 1 3.2828 26.9902 DKLPLQESEEEEREE-p P23497-4;S157-p DKLPLQESEEEEREE 0.18863765659071 0.0114147321866155 -0.263 0.461 14.2099684214342 27.1893589781981 -0.263 0.461 0.037931774307153 0.00191013517509597 -2.73155113305876 5.61269530910918 P23497 SP100 P23497.4.S157.p_SP100 P23497-4_S157s _1_1_157_157 P23497-4 P23497-4|P23497-3|P23497-2|P23497-5|E9PHV6|P23497-6|P23497-7 Isoform Sp100-C of Nuclear autoantigen Sp-100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19327.19327.5 22.01 22.01 99 1 1 1 0 670.9315 3270.6643 S157s TMT10 143 (K) GFENVIHDKLPLQEsEEEEREER (S) GFENVIHDKLPLQES(1.0)EEEEREER K:TMT10,s:Phosphorylated S SP100 103285 5 2 542.1 276.37 HUMAN 1 -14.21 27.1894 DKNKNKVTPLQSPID-p O95628-9;T267-p DKNKNKVTPLQSPID 0.369805323847201 0.0836376502231109 0.145666666666667 0.209666666666667 8.01314901879309 14.2664270585811 0.145666666666667 0.209666666666667 0.158010191027481 0.0374418495755131 1.63744154611421 2.74028555361248 O95628 CNOT4 O95628.9.T267.p_CNOT4 O95628-9_T267tS298s_2_2_267_298 O95628-9 O95628-9|O95628-8|O95628-2 Isoform 9 of CCR4-NOT transcription complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22890.22890.5 8.83 8.83 1.156 11 2 2 0 1079.5587 5233.7998 T267t S298s TMT10 264 (K) NKVtPLQSPIDKPSDSLSIGNGDNSQQISNSDTPsPPPGLSK (S) NKVT(0.99)PLQS(0.0)PIDKPS(0.0)DS(0.0)LS(0.0)IGNGDNS(0.0)QQIS(0.0)NS(0.0)DT(0.0)PS(0.99)PPPGLS(0.0)K K:TMT10,t:Phosphorylated T,s:Phosphorylated S CNOT4 78491.8 6 8 1032.1 185.91 HUMAN 1 8.0131 14.2664 DKNQQGFSPKAQKEP-p Q9NS87;S568-p DKNQQGFSPKAQKEP 0.664122656517915 0.00917359434218356 0.0666666666666667 -0.504666666666667 3.32560734313997 28.7987704065768 0.0666666666666667 -0.504666666666667 0.46498534531335 0.00131863002197722 0.785805270171622 -6.06569926203391 Q9NS87 KIF15 Q9NS87.S568.p_KIF15 Q9NS87_S568s_1_1_568_568 Q9NS87 Q9NS87|Q9NS87-2|Q9NS87-4|C9JKA9 Kinesin-like protein KIF15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8759.9138.3 12.52 7.33 12.524 2 1 1 0 668.6848 1923.0903 N563n S568s TMT10 560 (K) SDKnQQGFsPK (A) S(0.0)DKN(1.0)QQGFS(0.99)PK K:TMT10,n:Deamidated,s:Phosphorylated S KIF15 161127.4 5 3 2062.1 99.91 HUMAN 1 3.3256 -28.7988 DKPASSMSDDEMPVL-p Q96PN7;S621-p DKPASSMSDDEMPVL 0.745716591751159 0.125192204996887 0.0626666666666667 -0.167333333333333 2.41866797344706 11.8998195903855 0.0626666666666667 -0.167333333333333 0.572971740457938 0.0645681050616513 0.599644942258062 -2.31343492099818 Q96PN7 TRERF1 Q96PN7.S621.p_TRERF1 Q96PN7_S621s _1_1_621_621 Q96PN7 Q96PN7 Transcriptional-regulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21180.21180.5 19.1 16.42 2.396 3 1 1 0 603.3142 2932.5727 S621s TMT10 614 (R) DKPASSMsDDEMPVLEIPRK (H) DKPAS(0.0)S(0.0)MS(0.99)DDEMPVLEIPRK K:TMT10,s:Phosphorylated S TRERF1 132995.3 3 5 1115.1 175.65 HUMAN 1 2.4187 -11.8998 DKRISICSSDKRIAC-p Q13547;S409-p DKRISICSSDKRIAC 0.401966115889367 0.525337493660749 -0.121333333333333 -0.151666666666667 7.30417579216361 3.75550830063823 -0.121333333333333 -0.151666666666667 0.186029757861249 0.42116199083943 -1.51415952729665 -0.869955607559079 Q13547 HDAC1 Q13547.S409.p_HDAC1 Q13547_S409s _1_1_409_409 Q13547 Q13547 Histone deacetylase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9651.9651.2 10.03 10.03 1.51 3 1 1 0 609.7863 1138.5975 S409s Hydrogen 405 (R) ISICsSDK (R) IS(0.0)ICS(0.99)S(0.0)DK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S HDAC1 55672.5 4 4 700.1 240.49 HUMAN 1 -7.3042 -3.7555 DKRKATVSPGPHAGE-p O15055;S627-p DKRKATVSPGPHAGE 0.341280214844005 0.0806215382946855 0.133666666666667 0.265 8.67532191725129 14.5037401063747 0.133666666666667 0.265 0.135664996599783 0.0354507958559094 1.7521603610938 2.78414148091813 O15055 PER2 O15055.S627.p_PER2 O15055_S627s _1_1_627_627 O15055 O15055 Period circadian protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6610.6610.3 13.49 13.49 1.185 3 1 1 0 656.9842 1888.9715 S627s TMT10 624 (K) ATVsPGPHAGEAEPPSR (V) AT(0.0)VS(0.99)PGPHAGEAEPPS(0.0)R s:Phosphorylated S PER2 138402.8 2 3 1527.1 133.98 HUMAN 1 8.6753 14.5037 DKRLSTHSPFRTLNI-p P11171;S712-p DKRLSTHSPFRTLNI 0.969052930446159 0.0450486387615443 -0.00766666666666668 -0.243666666666667 0.267324936883194 18.0205151733376 -0.00766666666666669 -0.243666666666667 0.94030231712192 0.0157742413974628 -0.0784330628071727 -3.46357873418029 P11171 EPB41 P11171.S712.p_EPB41 P11171_S712s _1_1_712_712 P11171 P11171|P11171-2|P11171-5|P11171-7|P11171-3|Q4VB86|P11171-4|P11171-6 Protein 4.1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9502.9502.2 10.02 10.02 2.267 3 1 1 0 627.3164 1173.6578 S712s TMT10 708 (R) LSTHsPFR (T) LS(0.0)T(0.0)HS(0.99)PFR s:Phosphorylated S EPB41 97585.6 3 30 469.3 302.69 HUMAN 1 -0.2673 -18.0205 DKSIGAASPRPQSLE-p Q96L73;S2369-p DKSIGAASPRPQSLE 0.315427831657204 0.01174556366182 -0.158333333333333 -0.39 9.37802225413288 26.9797206500997 -0.158333333333333 -0.39 0.115397865176853 0.002004600964548 -1.87382270386549 -5.55563410889176 Q96L73 NSD1 Q96L73.S2369.p_NSD1 Q96L73_S2369s _1_1_2369_2369 Q96L73 Q96L73|Q96L73-3|Q96L73-2 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12335.12335.3 16 8.79 4.24 3 1 1 0 660.363 1899.1064 S2369s TMT10 2364 (K) SIGAAsPRPQSLEK (T) S(0.0)IGAAS(0.99)PRPQS(0.0)LEK K:TMT10,s:Phosphorylated S NSD1 302295.2 4 12 601.1 263.26 HUMAN 1 -9.378 -26.9797 DKSQDSGSDNRINTV-p O15516;S408-p DKSQDSGSDNRINTV 0.532768461565344 0.00880962755437148 -0.138 0.510333333333333 5.06049919986994 29.1314162722554 -0.138 0.510333333333333 0.311853110387804 0.00122140128557951 -1.1151334419716 6.16274876574886 O15516 CLOCK O15516.S408.p_CLOCK O15516_S406sS408s_2_2_406_408 O15516 O15516 Circadian locomoter output cycles protein kaput HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14348.14348.3 10.03 10.03 1.678 5 2 2 0 780.3758 2179.1719 S406s S408s TMT10 403 (K) SQDsGsDNRINTVSLK (E) S(0.0)QDS(0.99)GS(0.99)DNRINT(0.0)VS(0.0)LK K:TMT10,s:Phosphorylated S CLOCK 95815.6 1 4 4115.1 37.28 HUMAN 1 -5.0605 29.1314 DKSRRSRSPLLNDRR-p Q13523;S368-p DKSRRSRSPLLNDRR 0.0887698163036001 0.0462410380193495 0.387666666666667 0.338 22.4031557277516 17.8639139609281 0.387666666666667 0.338 0.00575021955470724 0.0163534204955858 4.41473464544667 3.43199336537447 Q13523 PRPF4B Q13523.S368.p_PRPF4B Q13523_S368s _1_1_368_368 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5772.5772.3 7.33 7.33 1.114 2 1 1 0 456.2391 1286.7378 S368s TMT10 366 (R) SRsPLLNDR (R) S(0.0)RS(0.99)PLLNDR s:Phosphorylated S PRPF4B 117327.1 1 18 70.1 666.55 HUMAN 1 22.4032 17.8639 DKSSIAGSEDAEPLA-p Q03164-3;S1119-p DKSSIAGSEDAEPLA 0.375876087847812 0.943339005183477 0.121666666666667 -0.0073333333333333 7.85803265056821 0.363512278478586 0.121666666666667 -0.0073333333333333 0.163755816555848 0.919705475651642 1.6105230564716 -0.10558817444087 Q03164 KMT2A Q03164.3.S1119.p_KMT2A Q03164-3_S1119s _1_1_1119_1119 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24368.24368.5 22.18 22.18 3.768 6 1 1 0 906.8983 4450.5037 S1119s TMT10 1104 (K) ILSSMGNDDKSSIAGsEDAEPLAPPIKPIKPVTR (N) ILS(0.0)S(0.0)MGNDDKS(0.0)S(0.0)IAGS(0.99)EDAEPLAPPIKPIKPVT(0.0)R K:TMT10,s:Phosphorylated S KMT2A 436608.3 3 19 26.1 936.8 HUMAN 1 7.858 -0.3635 DKTANQASDTFSGIG-p Q15847;S62-p DKTANQASDTFSGIG 0.479400067619992 0.170389705584643 0.0973333333333333 0.170333333333333 5.87721458842811 10.1039079527112 0.0961052327950671 0.170333333333333 0.25839168924275 0.0976358259955933 1.26265935546055 1.99895090687471 Q15847 ADIRF Q15847.S62.p_ADIRF Q15847_S62s _1_1_62_62 Q15847 Q15847 Adipogenesis regulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15817.15817.2 16.88 16.88 1.294 4 1 1 0 967.9836 1854.9962 S62s TMT10 57 (K) TANQAsDTFSGIGK (K) T(0.0)ANQAS(0.99)DT(0.0)FS(0.0)GIGK K:TMT10,s:Phosphorylated S ADIRF 7854.6 2 2 3374.1 52.58 HUMAN 1 5.8772 10.1039 DKTKGDDTDTRDDIS-p Q12888-2;T596-p DKTKGDDTDTRDDIS 0.24047106331053 0.400414419406525 -0.407666666666667 0.110333333333333 11.8316932352342 5.28756443342093 -0.407666666666667 0.110333333333333 0.0655889497054819 0.295967181456118 -2.30251678804438 1.15625910452706 Q12888 TP53BP1 Q12888.2.T596.p_TP53BP1 Q12888-2_T596t _1_1_596_596 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17419.17419.4 19.54 19.54 2.727 5 1 1 0 738.1266 2869.518 T596t TMT10 591 (K) TKGDDtDTRDDISILATGCK (G) T(0.0)KGDDT(0.99)DT(0.0)RDDIS(0.0)ILAT(0.0)GCK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T TP53BP1 216167.2 5 28 3.1 2297.07 HUMAN 1 -11.8317 5.2876 DKTKIRRSPSKPLPE-p P05455;S92-p DKTKIRRSPSKPLPE 0.419373214096758 0.0194990823050143 -0.19 -0.321 6.96887571046572 23.4768237018397 -0.19 -0.321 0.200961298832318 0.00449073708751712 -1.45556396340519 -4.66269869108777 P05455 SSB P05455.S92.p_SSB P05455_S92s _1_1_92_92 P05455 P05455|E9PFL9 Lupus La protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13954.13954.5 16.43 16.43 1.675 4 1 1 0 694.3943 3387.977 S92s TMT10 89 (K) IRRsPSKPLPEVTDEYKNDVK (N) IRRS(0.99)PS(0.0)KPLPEVT(0.0)DEY(0.0)KNDVK K:TMT10,s:Phosphorylated S SSB 47007.4 5 1 1184.1 168.81 HUMAN 1 -6.9689 -23.4768 DKTVVRQSPRRIKPV-p Q03164-3;S351-p DKTVVRQSPRRIKPV 0.0889604754572194 0.00194036235975101 -0.369666666666667 -1.076 22.3818991689176 42.4791322483085 -0.369666666666667 -1.076 0.00577843301384485 5.65049864571309e-05 -4.40981053957009 -11.3046650319544 Q03164 KMT2A Q03164.3.S351.p_KMT2A Q03164-3_S351s _1_1_351_351 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3613.3613.3 9.59 4.7 5.7 2 1 1 0 417.8977 1171.7109 S351s TMT10 346 (K) TVVRQsPR (R) T(0.0)VVRQS(0.99)PR s:Phosphorylated S KMT2A 436608.3 2 9 26.1 936.8 HUMAN 1 -22.3819 -42.4791 DKVHPIKSEFIRAKY-p Q9Y2X7;S104-p DKVHPIKSEFIRAKY 0.0478194935682717 0.844875126140389 -0.491 0.021 29.30394563853 1.02920320539573 -0.491 0.021 0.00117383062545347 0.789004862066267 -6.22311131511902 0.281159983993375 Q9Y2X7 GIT1 Q9Y2X7.S104.p_GIT1 Q9Y2X7_S104s _1_1_104_104 Q9Y2X7 Q9Y2X7|A0A0C4DGN6|J3QRU8|Q9Y2X7-2 ARF GTPase-activating protein GIT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14705.14705.3 10.7 8.07 99 1 1 1 0 588.6717 1684.031 S104s TMT10 99 (K) VHPIKsEFIR (A) VHPIKS(1.0)EFIR K:TMT10,s:Phosphorylated S GIT1 85081.2 1 20 474.2 301.74 HUMAN 1 -29.3039 1.0292 DKVIVDGSDMEEWPC-p Q9UPQ9;S195-p DKVIVDGSDMEEWPC 0.38300990372311 0.011037426761252 -0.184333333333333 0.394333333333333 7.71659912888191 27.4182085503227 -0.184333333333333 0.394333333333333 0.169176519974235 0.00181208741825041 -1.5859561692712 5.67548565960678 Q9UPQ9 TNRC6B Q9UPQ9.S195.p_TNRC6B Q9UPQ9_S195s _1_1_195_195 Q9UPQ9 Q9UPQ9|Q9UPQ9-1 Trinucleotide repeat-containing gene 6B protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29658.29658.3 18.43 18.43 11.708 2 1 1 0 825.3964 2394.2085 S195s TMT10 190 (K) VIVDGsDMEEWPCIASK (D) VIVDGS(0.99)DMEEWPCIAS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNRC6B 194854.6 1 2 865.1 210.19 HUMAN 1 -7.7166 27.4182 DKVLFDNTGRGKSKS-p Q9BXS5-2;T235-p DKVLFDNTGRGKSKS 0.179023418880636 0.0121513566667617 -0.247666666666667 0.435666666666667 14.7544032097059 26.7500811535715 -0.247666666666667 0.435666666666667 0.0334625997674692 0.00211344954691455 -2.8325149516868 5.49362574282175 Q9BXS5 AP1M1 Q9BXS5.2.T235.p_AP1M1 Q9BXS5-2_T235t _1_1_235_235 Q9BXS5-2 Q9BXS5-2|E7ENJ6|K7EJL1 Isoform 2 of AP-1 complex subunit mu-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14451.14451.3 13.14 13.14 99 1 1 1 0 548.9688 1564.9211 T235t TMT10 230 (K) VLFDNtGRGK (S) VLFDNT(1.0)GRGK K:TMT10,t:Phosphorylated T AP1M1 50010.6 3 2 3502.1 49.62 HUMAN 1 -14.7544 26.7501 DKVLLPEYGGTKVVL-p P61604;Y76-p DKVLLPEYGGTKVVL 0.278257140485788 0.0132282127607495 0.155 0.469666666666667 10.5096084252516 26.1457040135718 0.155 0.469666666666667 0.0889281294884356 0.00242901165488878 2.07040293130717 5.33286736375788 P61604 HSPE1 P61604.Y76.p_HSPE1 P61604_Y76y _1_1_76_76 P61604 P61604|B8ZZL8|B8ZZ54 10 kDa heat shock protein, mitochondrial GG20160819_MSz_CCLE_T4D7_pY_Injection_01.22766.22892.2 18.46 9.49 3.038 2 1 1 0 807.9506 1534.9245 Y76y TMT10 71 (K) VLLPEyGGTK (V) VLLPEY(0.99)GGT(0.0)K K:TMT10,y:Phosphorylated Y HSPE1 10931.5 5 1 188.1 18.46 HUMAN 1 10.5096 26.1457 DKVLTANSNPSSPSA-p Q9NV56;S191-p DKVLTANSNPSSPSA 0.0353674481292185 0.00203690866710184 0.707 0.967 33.8039975454484 41.9294370884118 0.707 0.967 0.000416485844730727 6.4129269246831e-05 7.6783505039841 11.0341789940007 Q9NV56 MRGBP Q9NV56.S191.p_MRGBP Q9NV56_S191s _1_1_191_191 Q9NV56 Q9NV56 MRG/MORF4L-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13021.13021.2 17.69 17.69 1.209 5 1 1 0 991.5214 1902.0697 S191s TMT10 186 (K) VLTANsNPSSPSAAK (R) VLT(0.0)ANS(0.99)NPS(0.0)S(0.0)PS(0.0)AAK K:TMT10,s:Phosphorylated S MRGBP 22587.9 2 1 4689.1 27.9 HUMAN 1 33.804 41.9294 DKVSSKNSLESYAFN-p P11142;S541-p DKVSSKNSLESYAFN 0.182820586285923 0.0712343053904755 -0.272666666666667 0.221333333333333 14.5056533378125 15.2544852286617 -0.272666666666667 0.221333333333333 0.0354351818791539 0.0298230102055093 -2.7862399526039 2.92436964534149 P11142 HSPA8 P11142.S541.p_HSPA8 P11142_S541s _1_1_541_541 P11142 P11142|E9PKE3|E9PNE6|A8K7Q2 Heat shock cognate 71 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22560.22560.4 11.97 11.97 1.242 5 1 1 0 618.8259 2392.3149 S541s TMT10 536 (K) VSSKNsLESYAFNMK (A) VS(0.0)S(0.0)KNS(0.99)LES(0.0)Y(0.0)AFNMK K:TMT10,s:Phosphorylated S HSPA8 71125 7 22 367.1 341.38 HUMAN 1 -14.5057 15.2545 DKWLCPLSGKKFKGP-p Q9BXP5;S718-p DKWLCPLSGKKFKGP 0.790974366065412 0.0205764172687099 -0.0753333333333333 -0.386 1.96597905726214 23.0800031737816 -0.0753333333333333 -0.386 0.635919429375409 0.00492039176103905 -0.501254607921822 -4.56822621221639 Q9BXP5 SRRT Q9BXP5.S718.p_SRRT Q9BXP5_S718s _1_1_718_718 Q9BXP5 Q9BXP5|Q9BXP5-3|Q9BXP5-2|Q9BXP5-4|Q9BXP5-5 Serrate RNA effector molecule homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24365.24365.3 8.36 8.36 99 1 1 1 0 500.2686 1418.823 S718s TMT10 713 (K) WLCPLsGK (K) WLCPLS(1.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SRRT 101121.1 2 15 321.1 364.45 HUMAN 1 -1.966 -23.08 DKYSISLSPPEQQKK-p Q15057;S521-p DKYSISLSPPEQQKK 0.660154229134287 0.676045030696495 0.0746666666666667 0.04 3.37856509782887 2.32321068380864 0.0746666666666667 0.04 0.459349756208132 0.585705000168115 0.796307990230192 0.579175144471832 Q15057 ACAP2 Q15057.S521.p_ACAP2 Q15057_S521s _1_1_521_521 Q15057 Q15057|A0A087X1H5 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22901.23115.3 20 17.45 2.525 4 1 1 0 878.4778 2553.4532 S521s TMT10 512 (K) FVDKYSISLsPPEQQK (K) FVDKY(0.0)S(0.0)IS(0.0)LS(0.99)PPEQQK K:TMT10,s:Phosphorylated S ACAP2 88997 28 8 629.1 257.13 HUMAN 1 3.3786 2.3232 DLADGHLSDSDDYSE-p A8K0R7-5;S278-p DLADGHLSDSDDYSE 0.114688242267433 0.398683806220813 0.436666666666667 0.144333333333333 19.5709538583887 5.30957681567749 0.436666666666667 0.144333333333333 0.0110383615331463 0.294470855749594 3.7874714594493 1.16025217246722 A8K0R7 ZNF839 A8K0R7.5.S278.p_ZNF839 A8K0R7-5_S278s _1_1_278_278 A8K0R7-5 A8K0R7-5|A8K0R7-2 Isoform 3 of Zinc finger protein 839 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20250.20250.5 25.22 25.22 2.559 5 1 1 0 871.5939 4273.9719 S278s TMT10 266 (K) FIKTEDLADGHLsDSDDYSELCVEEDEDQRER (H) FIKT(0.0)EDLADGHLS(0.99)DS(0.0)DDY(0.0)S(0.0)ELCVEEDEDQRER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF839 100640.4 1 1 2399.1 85.2 HUMAN 1 19.571 5.3096 DLASEEDSIEKDKEE-p Q92574;S472-p DLASEEDSIEKDKEE 0.958736090069421 0.0303674911148611 0.00799999999999998 -0.284333333333333 0.35572872749183 20.5205154191235 0.00799999999999998 -0.284333333333333 0.921355276304647 0.00887050730930167 0.10341893830463 -3.98770374534119 Q92574 TSC1 Q92574.S472.p_TSC1 Q92574_S468sS472s_2_2_468_472 Q92574 Q92574|Q92574-2 Hamartin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35495.35697.4 9.75 6.62 2.206 6 2 2 0 1082.2858 4166.1959 S468s S472s TMT10 452 (K) GSVTLSDLPGFLGDLAsEEDsIEKDKEEAAISR (E) GS(0.0)VT(0.0)LS(0.0)DLPGFLGDLAS(0.99)EEDS(0.99)IEKDKEEAAIS(0.0)R K:TMT10,s:Phosphorylated S TSC1 130734.2 2 19 418.1 320.74 HUMAN 1 0.3557 -20.5205 DLAVVTQSAEAPAEE-p Q9BX40;S296-p DLAVVTQSAEAPAEE 0.850600175936078 0.0618181426237541 0.0306666666666667 0.300666666666667 1.35976174029326 16.0933043141925 0.0306666666666667 0.300666666666667 0.731179195842523 0.0245849635412244 0.361835908318431 3.08393137854034 Q9BX40 LSM14B Q9BX40.S296.p_LSM14B Q9BX40_S296s _1_1_296_296 Q9BX40 Q9BX40|Q9BX40-2 Protein LSM14 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28293.28293.4 18.55 18.55 1.917 4 1 1 0 852.4111 3326.6503 S296s TMT10 289 (K) DLAVVTQsAEAPAEEDLLGPNCYYDK (S) DLAVVT(0.0)QS(0.99)AEAPAEEDLLGPNCY(0.0)Y(0.0)DK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LSM14B 42184.1 2 6 1596.1 128.9 HUMAN 1 1.3598 16.0933 DLCEGDLSPGLTDST-p Q8IZ73;S436-p DLCEGDLSPGLTDST 0.839563064744646 0.00387979257248964 -0.0353333333333333 0.62 1.46684934991935 35.6158842533907 -0.0353333333333333 0.62 0.71337036696261 0.000274417355401236 -0.387203992005345 8.32372819257469 Q8IZ73 RPUSD2 Q8IZ73.S436.p_RPUSD2 Q8IZ73_S436s _1_1_436_436 Q8IZ73 Q8IZ73|Q8IZ73-2 RNA pseudouridylate synthase domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35157.35157.4 22.57 22.57 4.725 7 1 1 0 1257.374 4946.5283 S436s TMT10 423 (K) QSLDVLDLCEGDLsPGLTDSTAPSSELGKDDLEELAAAAQK (M) QS(0.0)LDVLDLCEGDLS(0.99)PGLT(0.0)DS(0.0)T(0.0)APS(0.0)S(0.0)ELGKDDLEELAAAAQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RPUSD2 61880.9 1 2 3197.1 57.86 HUMAN 1 -1.4668 35.6159 DLCPAPGTPPGTPRP-p Q14451;T23-p DLCPAPGTPPGTPRP 0.181399305482146 0.00868295677400181 0.243666666666667 0.430666666666667 14.6043623767187 29.2353976649591 0.243666666666667 0.430666666666667 0.0346388737041265 0.00119250506824666 2.80457309760943 6.19333396054901 Q14451 GRB7 Q14451.T23.p_GRB7 Q14451_T23t _1_1_23_23 Q14451 Q14451|Q14451-4|Q14451-2 Growth factor receptor-bound protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29648.29648.4 20.59 20.59 3.828 7 1 1 0 1153.0487 4529.2417 T23t Acetyl 1 (-) MELDLSPPHLSSSPEDLCPAPGtPPGTPRPPDTPLPEEVK (R) MELDLS(0.0)PPHLS(0.0)S(0.0)S(0.0)PEDLCPAPGT(0.99)PPGT(0.0)PRPPDT(0.0)PLPEEVK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T GRB7 60535.8 2 1 1698.1 120.33 HUMAN 1 14.6044 29.2354 DLCSPKRSPTSSAIP-p Q9ULD2;S1245-p DLCSPKRSPTSSAIP 0.878269660579519 0.261041523184376 0.0223333333333333 -0.116666666666667 1.10872036308989 7.68680044159964 0.0223333333333333 -0.116666666666667 0.774690024491946 0.170341299410338 0.300931766124795 -1.58029664386794 Q9ULD2 MTUS1 Q9ULD2.S1245.p_MTUS1 Q9ULD2_S1245s _1_1_1245_1245 Q9ULD2 Q9ULD2|Q9ULD2-2|Q9ULD2-6|Q9ULD2-3|Q9ULD2-7|Q9ULD2-4 Microtubule-associated tumor suppressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10319.10319.2 11.33 4.77 1.436 5 1 1 0 903.4787 1725.9809 S1245s TMT10 1244 (K) RsPTSSAIPLQSPR (N) RS(0.99)PT(0.0)S(0.0)S(0.0)AIPLQS(0.0)PR s:Phosphorylated S MTUS1 142763.7 2 12 645.1 254.81 HUMAN 1 1.1087 -7.6868 DLDASVPSMKVHAPG-p Q09666;S5321-p DLDASVPSMKVHAPG 0.659829317652971 0.249861105551801 -0.149 0.206666666666667 3.38350158334722 7.93518654037911 -0.149 0.206666666666667 0.458827924763542 0.160872327770274 -0.797285210969076 1.62340498419824 Q09666 AHNAK Q09666.S5321.p_AHNAK Q09666_S5321s _1_1_5321_5321 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20646.20646.4 11.76 11.76 6.944 3 1 1 0 593.0744 2289.3091 S5321s TMT10 5308 (K) GPSLKGDLDASVPsMK (V) GPS(0.0)LKGDLDAS(0.0)VPS(0.99)MK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 131 1.1 4313.36 HUMAN 1 -3.3835 7.9352 DLDILHNSSQMKSMS-p Q7L2Z9;S248-p DLDILHNSSQMKSMS 0.572301168829667 0.609784297999937 0.0836666666666667 -0.052 4.46437524796559 2.91866733168877 0.0836666666666667 -0.052 0.357735858778265 0.51066167666789 1.00491804759018 -0.703746496983893 Q7L2Z9 CENPQ Q7L2Z9.S248.p_CENPQ Q7L2Z9_S248s _1_1_248_248 Q7L2Z9 Q7L2Z9 Centromere protein Q HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18200.18200.3 7.98 7.98 1.211 2 1 1 0 646.9966 1859.0097 S248s TMT10 241 (K) DLDILHNsSQMK (S) DLDILHNS(0.99)S(0.0)QMK K:TMT10,s:Phosphorylated S CENPQ 30651.8 4 2 4834.1 26.12 HUMAN 1 4.4644 -2.9187 DLDKPRRSPTLRYRR-p Q8NAV1;S226-p DLDKPRRSPTLRYRR 0.309869250687191 0.283198659907676 0.250666666666667 -0.163666666666667 9.51392408257977 7.22358459056425 0.250666666666667 -0.163666666666667 0.11184268683775 0.189514105926815 1.897371510686 -1.49966887273193 Q8NAV1 PRPF38A Q8NAV1.S226.p_PRPF38A Q8NAV1_S226s _1_1_226_226 Q8NAV1 Q8NAV1|Q8NAV1-2 Pre-mRNA-splicing factor 38A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4684.4684.5 11.28 11.28 2.466 4 1 1 0 434.6359 2089.1828 S226s Hydrogen 216 (R) SYRDLDKPRRsPTLR (Y) S(0.0)Y(0.0)RDLDKPRRS(0.99)PT(0.0)LR K:TMT10-Lys-Only,s:Phosphorylated S PRPF38A 37704.1 6 3 1570.1 130.77 HUMAN 1 9.5139 -7.2236 DLDKQIKTIERYMRR-p Q9Y4F9;T124-p DLDKQIKTIERYMRR 0.596115704924133 0.193292448868255 0.0806666666666667 0.142 4.14651591537424 9.3851713974379 0.0806666666666667 0.142 0.38490044080009 0.115208059124023 0.945034664522531 1.87435514968847 Q9Y4F9 FAM65B Q9Y4F9.T124.p_FAM65B Q9Y4F9_T124t_1_1_124_124 Q9Y4F9 Q9Y4F9|F5GX51|B7Z6U4|F5H029|Q9Y4F9-2 Rho family-interacting cell polarization regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7283.7283.4 7.17 4.29 3.926 3 1 1 0 634.0999 2437.3902 T124t M129m TMT10 124 (K) tIERYmRRLEFHISK (V) T(0.99)IERY(0.0)M(1.0)RRLEFHIS(0.0)K K:TMT10,t:Phosphorylated T,m:Oxidized methionine RIPOR2 119486.5 2 1 7244.1 7.17 HUMAN 1 4.1465 9.3852 DLDLEPLSDLEEGLE-p P29375;S1111-p DLDLEPLSDLEEGLE 0.938603183137293 0.133922460204677 0.0143333333333333 0.185 0.537193047207757 11.5093431053905 0.0143333333333333 0.185 0.883650841314966 0.0706424396809805 0.153387214132637 2.2445291028565 P29375 KDM5A P29375.S1111.p_KDM5A P29375_S1111s _1_1_1111_1111 P29375 P29375|P29375-2 Lysine-specific demethylase 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.35269.35471.3 16.14 16.14 9.425 2 1 1 0 794.7128 2302.1499 S1111s TMT10 1104 (K) DLDLEPLsDLEEGLEETR (D) DLDLEPLS(0.99)DLEEGLEET(0.0)R s:Phosphorylated S KDM5A 194944.7 3 4 446.1 309.57 HUMAN 1 0.5372 11.5093 DLDLFPASPTREAHR-p Q8TES7-6;S373-p DLDLFPASPTREAHR 0.125743941781331 0.0013882827676627 -0.298333333333333 -1.02366666666667 18.7266094140027 46.3037916495205 -0.298333333333333 -1.02366666666667 0.0134072299650336 2.34218305709125e-05 -3.61083910879865 -13.36557642315 Q8TES7 FBF1 Q8TES7.6.S373.p_FBF1 Q8TES7-6_S373s _1_1_373_373 Q8TES7-6 Q8TES7-6|K7ENL6|Q8TES7-5 Isoform 6 of Fas-binding factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27957.27957.4 23.85 18.34 1.228 2 1 1 0 817.9348 3188.7559 S373s TMT10 354 (R) KGGADWLGLKDEDLDLFPAsPTR (E) KGGADWLGLKDEDLDLFPAS(0.99)PT(0.0)R K:TMT10,s:Phosphorylated S FBF1 127438.2 1 5 1602.1 128.37 HUMAN 1 -18.7266 -46.3038 DLDLHLKSPKAKGEV-p Q09666;S2397-p DLDLHLKSPKAKGEV 0.101475037959758 0.00105578872948118 -0.319 -1.224 21.0050391277342 50.8077112811778 -0.319 -1.224 0.0079340710854854 8.30288211621982e-06 -4.098039860299 -16.2500342024909 Q09666 AHNAK Q09666.S2397.p_AHNAK Q09666_S2397s _1_1_2397_2397 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25353.25353.4 19.47 19.47 7.465 2 1 1 0 591.0858 2281.3557 S2397s TMT10 2386 (K) ISMPDLDLHLKsPK (A) IS(0.0)MPDLDLHLKS(0.99)PK K:TMT10,s:Phosphorylated S AHNAK 629603.7 14 69 1.1 4313.36 HUMAN 1 -21.005 -50.8077 DLDLLNASFQDESKI-p J3KQV8;S869-p DLDLLNASFQDESKI 0.532081809207476 0.00214335325679134 -0.111 -0.769666666666667 5.07156990677636 41.4763905087394 -0.111 -0.769666666666667 0.31105917034924 7.11804860343539e-05 -1.11715764476731 -10.815772047533 J3KQV8 SYNJ1 J3KQV8.S869.p_SYNJ1 J3KQV8_S869s _1_1_869_869 J3KQV8 J3KQV8|O43426|A0A0D9SGJ6|C9JFZ1|O43426-2|O43426-4|J3KPK1 Synaptojanin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25507.25507.2 20.4 20.4 6.199 3 1 1 0 1210.5862 2340.1971 S869s TMT10 859 (R) SAEDLDLLNAsFQDESK (I) S(0.0)AEDLDLLNAS(0.99)FQDES(0.0)K K:TMT10,s:Phosphorylated S SYNJ1 178858.1 4 1 677.1 246.73 HUMAN 1 -5.0716 -41.4764 DLDLTADSQPPVFKV-p Q13263;S501-p DLDLTADSQPPVFKV 0.114688242267433 0.248849513583655 0.577333333333333 0.152 19.5735335957485 7.95850782932907 0.577333333333333 0.152 0.0110318066219023 0.160010770717607 3.78801795296749 1.62744895957852 Q13263 TRIM28 Q13263.S501.p_TRIM28 Q13263_S501s _1_1_501_501 Q13263 Q13263|Q13263-2 Transcription intermediary factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30835.30835.3 18.99 16.89 4.491 2 1 1 0 733.0574 2117.1894 S501s TMT10 493 (R) LDLDLTADsQPPVFK (V) LDLDLT(0.0)ADS(0.99)QPPVFK K:TMT10,s:Phosphorylated S TRIM28 90316.8 5 14 118.1 555.36 HUMAN 1 19.5735 7.9585 DLDNSPLSPPSPRTK-p Q8NCF5;S201-p DLDNSPLSPPSPRTK 0.82086427017453 0.0629095680996146 0.032 -0.221333333333333 1.65331837630185 15.9928270376395 0.032 -0.221333333333333 0.683389280665561 0.0251603858058902 0.43058052446437 -3.06464885594201 Q8NCF5 NFATC2IP Q8NCF5.S201.p_NFATC2IP Q8NCF5_S201sS204s_2_2_201_204 Q8NCF5 Q8NCF5 NFATC2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22778.23100.4 18.64 18.64 2.693 4 2 2 0 747.8923 2828.6125 S201s S204s TMT10 188 (K) KKTEFLDLDNSPLsPPsPR (T) KKT(0.0)EFLDLDNS(0.0)PLS(0.99)PPS(0.99)PR K:TMT10,s:Phosphorylated S NFATC2IP 45987.1 13 17 477.1 300.69 HUMAN 1 1.6533 -15.9928 DLDQSNVTEETPEGE-p Q8NC51-3;T240-p DLDQSNVTEETPEGE 0.130013664511896 0.0428077317268441 -0.398333333333333 0.335333333333333 18.3228316422019 18.335498776293 -0.398333333333333 0.335333333333333 0.0147135285326592 0.0146706758820825 -3.52789734404734 3.52752884565674 Q8NC51 SERBP1 Q8NC51.3.T240.p_SERBP1 Q8NC51-3_S237sT240t_2_2_237_240 Q8NC51-3 Q8NC51-3|Q8NC51-4 Isoform 3 of Plasminogen activator inhibitor 1 RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19522.19522.5 21.31 16.9 4.242 5 2 2 0 1191.3596 5791.824 S237s N238n T240t TMT10 229 (K) DELTDLDQsnVtEETPEGEEHHPVADTENKENEVEEVKEEGPK (E) DELT(0.0)DLDQS(0.99)N(0.99)VT(0.99)EET(0.0)PEGEEHHPVADT(0.0)EN(0.0)KEN(0.0)EVEEVKEEGPK K:TMT10,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T SERBP1 43191.6 2 15 616.3 261.14 HUMAN 1 -18.3228 18.3355 DLDSETRSMVEKMMY-p Q9Y266;S285-p DLDSETRSMVEKMMY 0.665591316211384 0.578463348254494 -0.0766666666666667 -0.0626666666666666 3.30441442703076 3.20721218652839 -0.0766666666666667 -0.0626666666666666 0.467259949059681 0.477835906592179 -0.781592251259605 -0.762082887591779 Q9Y266 NUDC Q9Y266.S285.p_NUDC Q9Y266_S285s _1_1_285_285 Q9Y266 Q9Y266 Nuclear migration protein nudC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17815.17815.3 9.53 9.53 1.157 4 1 1 0 716.693 2068.0996 S285s TMT10 276 (K) LSDLDSETRsMVEK (M) LS(0.0)DLDS(0.0)ET(0.0)RS(0.99)MVEK K:TMT10,s:Phosphorylated S NUDC 38299.3 1 9 739.1 234.62 HUMAN 1 -3.3044 -3.2072 DLDTCMMTPKSKRKS-p Q5VZK9;T916-p DLDTCMMTPKSKRKS 0.58766889266991 0.557997242538558 0.106666666666667 0.056 4.25068121425335 3.41601986849366 0.106666666666667 0.056 0.37577845679338 0.455405229249781 0.964754393415738 0.803592850208986 Q5VZK9 LRRC16A Q5VZK9.T916.p_LRRC16A Q5VZK9_T916t_1_1_916_916 Q5VZK9 Q5VZK9|Q5VZK9-2 F-actin-uncapping protein LRRC16A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34194.34194.4 21.14 18.45 1.336 5 1 1 0 880.9409 3424.7666 M914m T916t TMT10 894 (R) SIITVEELTEIERLEDLDTCmMtPK (S) S(0.0)IIT(0.0)VEELT(0.0)EIERLEDLDT(0.0)CM(0.99)M(0.0)T(0.99)PK C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,t:Phosphorylated T CARMIL1 152809.3 19 3 280.1 388.82 HUMAN 1 4.2507 3.416 DLDTHQVSDDLSETD-p Q8NFW9;S557-p DLDTHQVSDDLSETD 0.886118944763575 0.0174864042819418 0.0326666666666666 0.431333333333333 1.02608157174534 24.2208916666471 0.0326666666666667 0.431333333333333 0.789572188987916 0.00378364893195313 0.280407980096004 4.84331964946901 Q8NFW9 MYRIP Q8NFW9.S557.p_MYRIP Q8NFW9_S557sS561s_2_2_557_561 Q8NFW9 Q8NFW9|Q8NFW9-2|Q8NFW9-6|Q8NFW9-3|Q8NFW9-4|Q8NFW9-5 Rab effector MyRIP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20368.20368.4 18.56 18.56 1.265 9 2 2 0 1084.9819 4176.9945 S557s S561s TMT10 550 (R) DLDTHQVsDDLsETDISNEARDPQTLTDTTEEK (R) DLDT(0.0)HQVS(0.99)DDLS(0.99)ET(0.0)DIS(0.0)NEARDPQT(0.0)LT(0.0)DT(0.0)T(0.0)EEK K:TMT10,s:Phosphorylated S MYRIP 96845.6 1 8 2094.1 97.91 HUMAN 1 1.0261 24.2209 DLECDKISLERQNKD-p Q9P2M7;S1016-p DLECDKISLERQNKD 0.56339397516382 0.931117828796046 -0.0793333333333333 0.0116666666666667 4.58983014882069 0.435929902092154 -0.0793333333333333 0.0116666666666667 0.347549753736836 0.904496748085951 -1.0283256991594 0.125702792425787 Q9P2M7 CGN Q9P2M7.S1016.p_CGN Q9P2M7_S1016s _1_1_1016_1016 Q9P2M7 Q9P2M7|Q0VF96-2 Cingulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13465.13465.4 11.81 11.81 99 1 1 1 0 661.5994 2563.4117 S1016s TMT10 1008 (R) QDLECDKIsLERQNK (D) QDLECDKIS(1.0)LERQNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CGN 136611.7 2 16 239.1 416.31 HUMAN 1 -4.5898 0.4359 DLEEESESWDNSEAE-p Q8NFG4;S298-p DLEEESESWDNSEAE 0.166553758928775 0.20543308537984 0.241333333333333 0.176333333333333 15.56849886549 9.04511913344222 0.241333333333333 0.176333333333333 0.0277427886564534 0.124591405952439 2.98576920719858 1.81551696251787 Q8NFG4 FLCN Q8NFG4.S298.p_FLCN Q8NFG4_S298sS302s_2_2_298_302 Q8NFG4 Q8NFG4 Folliculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26605.26605.4 14.77 14.77 1.203 5 2 2 0 1056.7163 4062.9192 S298s N301n S302s TMT10 289 (K) LADLEEESEsWDnsEAEEEEKAPVLPESTEGR (E) LADLEEES(0.0)ES(0.99)WDN(1.0)S(0.99)EAEEEEKAPVLPES(0.0)T(0.0)EGR K:TMT10,s:Phosphorylated S,n:Deamidated FLCN 65442.1 2 8 1292.1 157.11 HUMAN 1 15.5685 9.0451 DLEGGSDSDNPQTPK-p Q8WU20;S447-p DLEGGSDSDNPQTPK 0.51428507339171 0.817204828436607 0.122 -0.025 5.33246743543282 1.22756631940519 0.122 -0.025 0.292922853704658 0.753777844166172 1.16465052710793 -0.329992103818393 Q8WU20 FRS2 Q8WU20.S447.p_FRS2 Q8WU20_S445sS447s_2_2_445_447 Q8WU20 Q8WU20 Fibroblast growth factor receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23070.23070.5 11.9 11.9 11.9 9 2 2 0 897.4458 4323.2621 S445s S447s TMT10 433 (R) QLNYIQVDLEGGsDsDNPQTPKTPTTPLPQTPTRR (T) QLNY(0.0)IQVDLEGGS(0.99)DS(0.99)DNPQT(0.0)PKT(0.0)PT(0.0)T(0.0)PLPQT(0.0)PT(0.0)RR K:TMT10,s:Phosphorylated S FRS2 57427.4 1 18 301.1 376.53 HUMAN 1 5.3325 -1.2276 DLEKDIISDTSGDFR-p P07355;S161-p DLEKDIISDTSGDFR 0.126572282263763 0.00643197596649139 -0.446333333333333 0.484 18.6279646060398 31.5140845337455 -0.446333333333334 0.484 0.0137152440348636 0.000705653575840046 -3.59048705347855 6.89468438129132 P07355 ANXA2 P07355.S161.p_ANXA2 P07355_S161s _1_1_161_161 P07355 P07355|A6NMY6|H0YMU9 Annexin A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16782.16782.3 12.56 5.44 1.364 3 1 1 0 631.3237 1811.9903 S161s TMT10 158 (K) DIIsDTSGDFRK (L) DIIS(0.99)DT(0.0)S(0.0)GDFRK K:TMT10,s:Phosphorylated S ANXA2 38831.6 2 12 537.1 277.57 HUMAN 1 -18.628 31.5141 DLENRCQSLQEELDF-p Q03252;S214-p DLENRCQSLQEELDF 0.663036242222824 0.0735249969700804 0.0653333333333333 0.218 3.33917515482058 15.0497728875258 0.0653333333333333 0.218 0.46353494946678 0.0312624284840531 0.788499453152329 2.88590050163069 Q03252 LMNB2 Q03252.S214.p_LMNB2 Q03252_S214s _1_1_214_214 Q03252 Q03252 Lamin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18203.18203.3 12.9 5.84 99 1 1 1 0 697.6837 2011.0683 S214s TMT10 212 (R) CQsLQEELDFRK (S) CQS(1.0)LQEELDFRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LMNB2 70061.3 1 24 440.2 312.01 HUMAN 1 3.3392 15.0498 DLENRCQSLTEDLEF-p P20700;S200-p DLENRCQSLTEDLEF 0.916520566451657 0.0225621081021444 -0.0203333333333333 0.351333333333333 0.738947399953191 22.49060030592 -0.0203333333333333 0.351333333333333 0.843539181680871 0.00563559752087354 -0.207050162792963 4.43020775281877 P20700 LMNB1 P20700.S200.p_LMNB1 P20700_S200s _1_1_200_200 P20700 P20700|E9PBF6|A0A0D9SFE5 Lamin-B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16898.16898.3 12.19 12.19 3.477 2 1 1 0 612.2921 1754.8945 S200s Hydrogen 198 (R) CQsLTEDLEFRK (S) CQS(0.99)LT(0.0)EDLEFRK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S LMNB1 66692.5 7 4 440.1 312.01 HUMAN 1 -0.7389 22.4906 DLERQKFSDLKLNGP-p O60716-3;S81-p DLERQKFSDLKLNGP 0.135175709599961 0.156447950440521 -0.324666666666667 -0.255666666666667 17.8251867173103 10.5939068053962 -0.324666666666667 -0.255666666666667 0.0164999006136083 0.087218641812028 -3.42697251198444 -2.08420835569815 O60716 CTNND1 O60716.3.S81.p_CTNND1 O60716-3_S81s _1_1_81_81 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-15|O60716-16 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14374.14374.3 8.04 2 99 1 1 1 0 544.983 1552.9666 S81s TMT10 78 (R) QKFsDLK (L) QKFS(1.0)DLK K:TMT10,s:Phosphorylated S CTNND1 105545.3 1 10 21.1 1014.17 HUMAN 1 -17.8252 -10.5939 DLESATVSDGELTGA-p O14924;S671-p DLESATVSDGELTGA 0.0582229308916117 0.10625471425705 -0.481 -0.224666666666667 26.9661775928911 12.8642440020004 -0.481 -0.224666666666667 0.00201086187749824 0.0517101264522844 -5.55961300611988 -2.48528637089529 O14924 RGS12 O14924.S671.p_RGS12 O14924_S671s _1_1_671_671 O14924 O14924|O14924-4|O14924-5|O14924-6 Regulator of G-protein signaling 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.26835.26835.3 17.17 17.17 1.279 5 1 1 0 892.1097 2594.3449 S671s TMT10 661 (R) SLDDLESATVsDGELTGADLK (D) S(0.0)LDDLES(0.0)AT(0.0)VS(0.99)DGELT(0.0)GADLK K:TMT10,s:Phosphorylated S RGS12 157895 1 3 2684.1 74.03 HUMAN 1 -26.9662 -12.8642 DLESSLESLVFDLRT-p Q99549-2;S192-p DLESSLESLVFDLRT 0.982795908449026 0.828892841143029 -0.00333333333333334 0.022 0.149731415990063 1.1389111612723 -0.00333333333333334 0.022 0.966110625049925 0.769323296524767 -0.0444885057644432 0.308337852058058 Q99549 MPHOSPH8 Q99549.2.S192.p_MPHOSPH8 Q99549-2_S189sS192s_2_2_189_192 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35705.35909.3 9.18 5.27 1.102 4 2 2 0 851.7576 2393.3328 S189s S192s TMT10 182 (K) SKPDLESsLEsLVFDLR (T) S(0.0)KPDLES(0.0)S(0.99)LES(0.99)LVFDLR K:TMT10,s:Phosphorylated S MPHOSPH8 98148.4 4 20 242.1 413.34 HUMAN 1 -0.1497 1.1389 DLETRSPSPISISSS-p Q5VT06;S1830-p DLETRSPSPISISSS 0.846669419054343 0.971190520605253 -0.032 -0.00533333333333334 1.39841749904464 0.180363711461817 -0.032 -0.00533333333333332 0.724699981272796 0.959320287323354 -0.371033249540429 -0.0534068892100756 Q5VT06 CEP350 Q5VT06.S1830.p_CEP350 Q5VT06_S1830s _1_1_1830_1830 Q5VT06 Q5VT06 Centrosome-associated protein 350 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21893.21893.4 15.96 15.44 1.284 13 1 1 0 908.2029 3549.8358 S1830s TMT10 1816 (K) ATSPGPTDLETRSPsPISISSSETSSIMQK (L) AT(0.0)S(0.0)PGPT(0.0)DLET(0.0)RS(0.0)PS(0.99)PIS(0.0)IS(0.0)S(0.0)S(0.0)ET(0.0)S(0.0)S(0.0)IMQK K:TMT10,s:Phosphorylated S CEP350 352521.4 7 16 265.1 395.34 HUMAN 1 -1.3984 -0.1804 DLFAFQESPPRFLPS-p P51957;S563-p DLFAFQESPPRFLPS 0.392751420181939 0.0190613364431112 -0.139333333333333 -0.341333333333333 7.48529061238393 23.6506329164129 -0.139333333333333 -0.341333333333333 0.17843125855303 0.00431456194240633 -1.54572145698322 -4.70447997238883 P51957 NEK4 P51957.S563.p_NEK4 P51957_S563s _1_1_563_563 P51957 P51957|P51957-2|P51957-3 Serine/threonine-protein kinase Nek4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26911.26911.5 18.1 15.44 1.716 5 1 1 0 802.4421 3928.194 S563s TMT10 556 (R) DLFAFQEsPPRFLPSHPIVGKVDVTSTQK (E) DLFAFQES(0.99)PPRFLPS(0.0)HPIVGKVDVT(0.0)S(0.0)T(0.0)QK K:TMT10,s:Phosphorylated S NEK4 95394.3 5 5 1066.1 181.01 HUMAN 1 -7.4853 -23.6506 DLFDLNSSEEDDTEG-p Q9Y3T9;S673-p DLFDLNSSEEDDTEG 0.33286094806896 0.477114518090831 0.145666666666667 0.0666666666666667 8.91822292842704 4.28602519992884 0.145666666666667 0.0666666666666667 0.128285540155406 0.37273268690337 1.79420680460964 0.971250503571454 Q9Y3T9 NOC2L Q9Y3T9.S673.p_NOC2L Q9Y3T9_S672sS673s_2_2_672_673 Q9Y3T9 Q9Y3T9 Nucleolar complex protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28833.29441.3 19.68 19.68 4.867 4 2 2 0 865.3406 2434.0731 S672s S673s TMT10 666 (K) DLFDLNssEEDDTEGFSER (G) DLFDLNS(0.99)S(0.99)EEDDT(0.0)EGFS(0.0)ER s:Phosphorylated S NOC2L 85773.7 29 7 1605.1 128.26 HUMAN 1 8.9182 4.286 DLFGRAPSKAVNPDE-p P38646;S408-p DLFGRAPSKAVNPDE 0.958739785397171 0.00804726785807561 -0.0116666666666667 0.623666666666667 0.354973707551658 29.8372554626489 -0.0116666666666667 0.623666666666667 0.921515467627966 0.00103818429231489 -0.103207396150429 6.37273148944203 P38646 HSPA9 P38646.S408.p_HSPA9 P38646_S408s _1_1_408_408 P38646 P38646 Stress-70 protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23652.23652.4 11.5 11.5 1.922 2 1 1 0 553.8035 2132.2228 S408s TMT10 395 (K) VQQTVQDLFGRAPsK (A) VQQT(0.0)VQDLFGRAPS(0.99)K K:TMT10,s:Phosphorylated S HSPA9 73964.5 1 33 367.2 341.38 HUMAN 1 -0.355 29.8373 DLFKDIQSLPRNAAL-p Q9H4M9;S284-p DLFKDIQSLPRNAAL 0.207263338839977 0.152313892448465 -0.313666666666667 0.146666666666667 13.2099290181452 10.7470000791793 -0.313666666666667 0.146666666666667 0.0477537078544005 0.0841976542258506 -2.54896472541364 2.110916052601 Q9H4M9 EHD1 Q9H4M9.S284.p_EHD1 Q9H4M9_S284s _1_1_284_284 Q9H4M9 Q9H4M9 EH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31960.31960.4 17.07 17.07 99 1 1 1 0 679.855 2636.4336 S284s TMT10 270 (K) LFEAEEQDLFKDIQsLPR (N) LFEAEEQDLFKDIQS(1.0)LPR K:TMT10,s:Phosphorylated S EHD1 60682.8 2 4 1572.1 130.65 HUMAN 1 -13.2099 10.747 DLFNGLDSEEEKDGE-p Q96S90;S99-p DLFNGLDSEEEKDGE 0.306684187031916 0.375251565092201 -0.171 0.097 9.60881427337587 5.65065967911113 -0.171 0.097 0.109425508300309 0.272228777006419 -1.91382080165026 1.2217969208069 Q96S90 LYSMD1 Q96S90.S99.p_LYSMD1 Q96S90_S99s _1_1_99_99 Q96S90 Q96S90|Q96S90-2 LysM and putative peptidoglycan-binding domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20686.20686.3 21.08 21.08 99 1 1 1 0 907.7759 2641.3448 S99s TMT10 92 (R) DLFNGLDsEEEKDGEEK (V) DLFNGLDS(1.0)EEEKDGEEK K:TMT10,s:Phosphorylated S LYSMD1 25059.8 8 8 2395.1 85.34 HUMAN 1 -9.6088 5.6507 DLFRDIQSLPRNAAL-p Q9NZN3;S284-p DLFRDIQSLPRNAAL 0.131504655206906 0.0144251158982194 -0.690666666666667 0.429666666666667 18.2033584522671 25.5211095249514 -0.690666666666667 0.429666666666667 0.015123912454854 0.00280471700415319 -3.50353862171532 5.17035086754959 Q9NZN3 EHD3 Q9NZN3.S284.p_EHD3 Q9NZN3_S284s _1_1_284_284 Q9NZN3 A0A024R571|Q9NZN3|Q9H4M9 EH domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12688.12688.2 9.42 4.28 99 1 1 1 0 569.2966 1057.6203 S284s TMT10 281 (R) DIQsLPR (N) DIQS(1.0)LPR s:Phosphorylated S EHD3 60943.1 1 9 1561.3 131.45 HUMAN 1 -18.2034 25.5211 DLFTARGSPFKTKSS-p Q9Y3R5;S705-p DLFTARGSPFKTKSS 0.355881162891463 0.00172154676014582 -0.166 -1.005 8.34113008279418 43.7989388938616 -0.166 -1.005 0.146516653863521 4.16971249076061e-05 -1.69429193412847 -11.9795126581995 Q9Y3R5 DOPEY2 Q9Y3R5.S705.p_DOPEY2 Q9Y3R5_S705s _1_1_705_705 Q9Y3R5 Q9Y3R5|Q9Y3R5-2 Protein dopey-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27682.27682.3 11.17 11.17 2.218 3 1 1 0 746.0596 2156.1938 S705s TMT10 694 (K) QMLSDLFTARGsPFK (T) QMLS(0.0)DLFT(0.0)ARGS(0.99)PFK K:TMT10,s:Phosphorylated S DOPEY2 260507.5 2 5 894.1 204.29 HUMAN 1 -8.3411 -43.7989 DLGAMKHSPGLSRDL-p Q6P2H3;S141-p DLGAMKHSPGLSRDL 0.224895857051772 0.00215840414867258 -0.198666666666667 -0.763333333333333 12.4440515847393 41.4175136743833 -0.198666666666667 -0.763333333333334 0.0569632607304484 7.21520429701123e-05 -2.41135377458636 -10.7876837310516 Q6P2H3 CEP85 Q6P2H3.S141.p_CEP85 Q6P2H3_S141s _1_1_141_141 Q6P2H3 Q6P2H3|Q6P2H3-2|Q6P2H3-4 Centrosomal protein of 85 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9569.9569.4 17.25 17.25 3.313 2 1 1 0 520.2704 1998.0955 S141s TMT10 132 (R) NGDLGAMKHsPGLSR (D) NGDLGAMKHS(0.99)PGLS(0.0)R K:TMT10,s:Phosphorylated S CEP85 86322.3 5 3 1644.1 124.14 HUMAN 1 -12.4441 -41.4175 DLGEDIASN______-p Q7Z4S6-5;S1636-p DLGEDIASN______ 0.0937459691961675 0.0187706510612468 0.36 0.404 21.8612084077402 23.7550647747363 0.36 0.404 0.00651447106181756 0.00421205004462286 4.29026316975263 4.72970320430285 Q7Z4S6 KIF21A Q7Z4S6.5.S1636.p_KIF21A Q7Z4S6-5_S1636s _1_1_1636_1636 Q7Z4S6-5 Q7Z4S6|Q7Z4S6-2|Q7Z4S6-5|Q7Z4S6-3|Q7Z4S6-6 Isoform 5 of Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20502.20502.2 15.36 15.36 1.821 3 1 1 0 1186.0306 2291.0836 S1636s TMT10 1618 (R) NLQDGQISDTGDLGEDIAsN (-) NLQDGQIS(0.0)DT(0.0)GDLGEDIAS(0.99)N s:Phosphorylated S KIF21A 184163.5 4 20 390.1 332.37 HUMAN 1 21.8612 23.7551 DLGERKPSSAAYQKA-p P34741;S187-p DLGERKPSSAAYQKA 0.0802873802265696 0.00894700841055443 -0.784333333333333 -0.437666666666667 23.3942206102941 29.0193409938415 -0.784333333333333 -0.437666666666667 0.00457696866304928 0.00125333134323635 -4.64824418406134 -6.12991590273396 P34741 SDC2 P34741.S187.p_SDC2 P34741_S187s _1_1_187_187 P34741 P34741|E9PBI9|E7ESK6 Syndecan-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8302.8302.2 10.74 4.94 1.127 3 1 1 0 873.9923 1667.0095 S187s TMT10 185 (R) KPsSAAYQK (A) KPS(0.99)S(0.0)AAY(0.0)QK K:TMT10,s:Phosphorylated S SDC2 22216.6 5 2 3346.1 53.25 HUMAN 1 -23.3942 -29.0193 DLGESTASLDSIVRD-p Q9NYQ6;S2761-p DLGESTASLDSIVRD 0.561099518094358 0.0169048692505771 0.083 0.356333333333333 4.62046202623819 24.4489827762151 0.083 0.356333333333334 0.345107023009018 0.00359006012777592 1.034022762637 4.89962079258906 Q9NYQ6 CELSR1 Q9NYQ6.S2761.p_CELSR1 Q9NYQ6_S2761s _1_1_2761_2761 Q9NYQ6 Q9NYQ6 Cadherin EGF LAG seven-pass G-type receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23481.23481.4 16.58 16.58 1.101 5 1 1 0 693.8574 2692.4405 S2761s TMT10 2753 (R) TDLGESTAsLDSIVRDEGIQK (L) T(0.0)DLGES(0.0)T(0.0)AS(0.99)LDS(0.0)IVRDEGIQK K:TMT10,s:Phosphorylated S CELSR1 334558.1 9 3 1317.1 154.7 HUMAN 1 4.6205 24.449 DLGKAHGSLKP____-p Q9BUP3;S239-p DLGKAHGSLKP____ 0.814399806622497 0.158355786261612 0.0356666666666667 0.163666666666667 1.71167239579727 10.5286408968958 0.0356666666666667 0.163666666666667 0.674268328182608 0.0885392645730061 0.44395881779265 2.07283341179875 Q9BUP3 HTATIP2 Q9BUP3.S239.p_HTATIP2 Q9BUP3_S239s _1_1_239_239 Q9BUP3 Q9BUP3-3|E9PI87 Oxidoreductase HTATIP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7117.7117.2 7.38 7.38 99 1 1 1 0 624.3498 1167.725 S239s TMT10 236 (K) AHGsLKP (-) AHGS(1.0)LKP K:TMT10,s:Phosphorylated S HTATIP2 27276.7 1 3 4232.1 35.02 HUMAN 1 1.7117 10.5286 DLGKSFHSQQKEIEQ-p Q8NI35;S839-p DLGKSFHSQQKEIEQ 0.795091218020611 0.00469298309070782 -0.0896666666666667 -1.079 1.9241455286979 34.0536286430974 -0.0896666666666667 -1.079 0.642074536789531 0.000393221391486069 -0.491937216056757 -7.75223660589092 Q8NI35 INADL Q8NI35.S839.p_INADL Q8NI35_S836sS839s_2_2_836_839 Q8NI35 Q8NI35|Q8NI35-2|Q8NI35-3|Q8NI35-4|A0A087WUZ6|A0A0X1KG69|Q8NI35-5 InaD-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28379.28379.5 16.82 13.41 16.822 3 2 2 0 913.2607 4402.3529 S836s S839s TMT10 814 (K) GFRDEPYFKEELVDEPFLDLGKsFHsQQK (E) GFRDEPY(0.0)FKEELVDEPFLDLGKS(0.99)FHS(0.99)QQK K:TMT10,s:Phosphorylated S PATJ 197163.3 1 25 127.1 542.92 HUMAN 1 -1.9241 -34.0536 DLGPRAQSPGSPLHA-p Q13796;S1036-p DLGPRAQSPGSPLHA 0.456329906764675 0.0354440003769417 0.109666666666667 0.310666666666667 6.28309289559709 19.5215445967492 0.109666666666667 0.310666666666667 0.23533726960504 0.0111646609868522 1.3348415483664 3.77358897062639 Q13796 SHROOM2 Q13796.S1036.p_SHROOM2 Q13796_S1036s _1_1_1036_1036 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5476.5476.2 15.45 15.45 1.43 2 1 1 0 715.36 1349.7487 S1036s TMT10 1034 (R) AQsPGSPLHAR (G) AQS(0.99)PGS(0.0)PLHAR s:Phosphorylated S SHROOM2 177605.1 5 20 90.1 622.62 HUMAN 1 6.2831 19.5215 DLILEYGSLDVRNKT-p Q8TDM6;S1552-p DLILEYGSLDVRNKT 0.126867028860092 0.839811441190131 -0.46 0.0226666666666667 18.5901412288265 1.06665380950037 -0.46 0.0226666666666667 0.0138352138731584 0.782230272153351 -3.58269883198504 0.290486392968045 Q8TDM6 DLG5 Q8TDM6.S1552.p_DLG5 Q8TDM6_S1552s _1_1_1552_1552 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33991.33991.3 18.88 18.88 4.464 2 1 1 0 798.7426 2314.2492 S1552s TMT10 1537 (K) GPDGLVPGDLILEYGsLDVR (N) GPDGLVPGDLILEY(0.0)GS(0.99)LDVR s:Phosphorylated S DLG5 215575.4 1 38 34.1 890.58 HUMAN 1 -18.5901 1.0667 DLINRMDYVEINIDH-p Q00341;Y437-p DLINRMDYVEINIDH 0.767491684982091 0.233481774788753 0.063 -0.209 2.20070744858885 8.31898114915267 0.063 -0.209 0.602461439487455 0.147265794610609 0.55280523440561 -1.689896688801 Q00341 HDLBP Q00341.Y437.p_HDLBP Q00341_Y437y_1_1_437_437 Q00341 Q00341|A0A024R4E5|Q00341-2 Vigilin GG20160819_MSz_CCLE_T4D7_pY_Injection_01.18146.18146.3 13.52 13.52 99 1 1 1 0 644.3187 1834.9773 M435m Y437y TMT10 435 (R) mDyVEINIDHK (F) M(1.0)DY(1.0)VEINIDHK K:TMT10,m:Oxidized methionine,y:Phosphorylated Y HDLBP 142080.7 1 1 256.1 13.52 HUMAN 1 2.2007 -8.319 DLIPYQDSPEGPDHS-p Q8WUA4;S765-p DLIPYQDSPEGPDHS 0.93173288520204 0.0134821883369994 -0.0143333333333333 0.406 0.608822543096249 26.0037640959942 -0.0143333333333333 0.406 0.869196053318265 0.00250971028471423 -0.172656008627467 5.29561650222702 Q8WUA4 GTF3C2 Q8WUA4.S765.p_GTF3C2 Q8WUA4_S765s _1_1_765_765 Q8WUA4 Q8WUA4 General transcription factor 3C polypeptide 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19324.19324.3 20.04 17.61 2.755 6 1 1 0 1100.8674 3220.6163 S765s TMT10 757 (K) ADLIPYQDsPEGPDHSSASSGVPNPPK (A) ADLIPY(0.0)QDS(0.99)PEGPDHS(0.0)S(0.0)AS(0.0)S(0.0)GVPNPPK K:TMT10,s:Phosphorylated S GTF3C2 101761.7 3 8 753.1 231.45 HUMAN 1 -0.6088 26.0038 DLKADEPSSEESDLE-p P50502;S75-p DLKADEPSSEESDLE 0.161132785458414 0.104940821363575 -0.523333333333333 0.359 15.8791972218154 12.9333012327274 -0.523333333333333 0.359 0.0258273755653217 0.0508943856964703 -3.04502909336444 2.49769309368906 P50502 ST13 P50502.S75.p_ST13 P50502_S75sS76sS79s_3_3_75_79 P50502 P50502|Q3KNR6 Hsc70-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20520.20520.4 11.67 11.67 99 3 3 3 0 916.1878 3421.8244 S75s S76s S79s TMT10 64 (K) KVEEDLKADEPssEEsDLEIDK (E) KVEEDLKADEPS(1.0)S(1.0)EES(1.0)DLEIDK K:TMT10,s:Phosphorylated S ST13 41502.2 10 8 2700.1 73.52 HUMAN 1 -15.8792 12.9333 DLKKLGASEGTINQE-p Q2LD37;S3562-p DLKKLGASEGTINQE 0.601113862580168 0.701587033174113 0.0736666666666667 0.0376666666666667 4.08291183196741 2.11567127407399 0.0736666666666667 0.0376666666666667 0.390578934927984 0.614374062676337 0.932945450923508 0.534205214143671 Q2LD37 KIAA1109 Q2LD37.S3562.p_KIAA1109 Q2LD37_S3562s _1_1_3562_3562 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7|Q2LD37-6 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15867.15867.2 13.55 13.55 2.219 2 1 1 0 912.9568 1744.9391 S3562s TMT10 3559 (K) LGAsEGTINQEIQR (Y) LGAS(0.99)EGT(0.0)INQEIQR s:Phosphorylated S KIAA1109 559693.9 3 20 143.1 520.8 HUMAN 1 4.0829 2.1157 DLKPKRGSPHRGSLD-p Q9P219;S1491-p DLKPKRGSPHRGSLD 0.539507901385774 0.321829107177403 0.127 0.154666666666667 4.95170474257733 6.50862260138485 0.127 0.154666666666667 0.319763968905711 0.22342807299236 1.09520025599701 1.37434186083305 Q9P219 CCDC88C Q9P219.S1491.p_CCDC88C Q9P219_S1491s _1_1_1491_1491 Q9P219 Q9P219|Q9P219-2 Protein Daple HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5154.5154.5 13.21 13.21 2.203 5 1 1 0 522.4589 2528.2949 S1491s TMT10 1489 (K) RGsPHRGSLDRTDASTDLAMR (S) RGS(0.99)PHRGS(0.0)LDRT(0.0)DAS(0.0)T(0.0)DLAMR s:Phosphorylated S CCDC88C 229367.3 2 8 742.1 234.08 HUMAN 1 4.9517 6.5086 DLKPWEKSPILKISA-p Q9P2D0;S1083-p DLKPWEKSPILKISA 0.33913520491485 0.00898875481129879 -0.354 -0.746 8.73562893429655 28.9758522442036 -0.354 -0.746 0.133794144382394 0.00126594481857946 -1.76259992740413 -6.11721273456685 Q9P2D0 IBTK Q9P2D0.S1083.p_IBTK Q9P2D0_S1083s _1_1_1083_1083 Q9P2D0 Q9P2D0|E7EPI0|Q9P2D0-2 Inhibitor of Bruton tyrosine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20629.20629.4 11.8 6.51 99 1 1 1 0 645.6322 2499.5356 S1083s TMT10 1075 (R) EDLKPWEKsPILK (I) EDLKPWEKS(1.0)PILK K:TMT10,s:Phosphorylated S IBTK 152465 1 8 907.1 202.21 HUMAN 1 -8.7356 -28.9759 DLKRRSMSIDDTPRG-p Q96N67-6;S182-p DLKRRSMSIDDTPRG 0.774068961660412 0.227245122490281 0.0523333333333333 0.185333333333333 2.12936772128691 8.47686867353014 0.0523333333333333 0.185333333333333 0.612439548810381 0.142008105177663 0.537264597877099 1.71722226599635 Q96N67 DOCK7 Q96N67.6.S182.p_DOCK7 Q96N67-6_S182s _1_1_182_182 Q96N67-6 Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3|Q96N67-4|Q96N67-7 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10919.10919.2 12.61 7.85 2.047 3 1 1 0 665.799 1250.6248 S182s TMT10 180 (R) SMsIDDTPR (G) S(0.0)MS(0.99)IDDT(0.0)PR s:Phosphorylated S DOCK7 243551.1 1 4 345.1 352.4 HUMAN 1 2.1294 8.4769 DLKSSKASLGSLEGE-p Q09666;S5749-p DLKSSKASLGSLEGE 0.426313016558813 0.00739033881289099 0.114666666666667 0.462333333333333 6.82160467132011 30.4776670654639 0.114666666666667 0.462333333333333 0.207892840352928 0.000895845865035676 1.42974848360653 6.56815179800849 Q09666 AHNAK Q09666.S5749.p_AHNAK Q09666_S5749sS5752s_2_2_5749_5752 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25557.25557.2 17.3 15.22 9.166 4 2 2 0 1176.0444 2191.1494 S5749s S5752s TMT10 5748 (K) AsLGsLEGEAEAEASSPK (G) AS(0.99)LGS(0.99)LEGEAEAEAS(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S AHNAK 629603.7 57 181 1.1 4313.36 HUMAN 1 6.8216 30.4777 DLLASVPSPSSSGSR-p Q8WU79;S219-p DLLASVPSPSSSGSR 0.911605742223265 0.581641712569367 0.0193333333333333 0.0573333333333333 0.786600530668795 3.17707466653462 0.0193333333333333 0.0573333333333334 0.834334009654683 0.48116334272978 0.219458136753723 0.756044535176298 Q8WU79 SMAP2 Q8WU79.S219.p_SMAP2 Q8WU79_S219s _1_1_219_219 Q8WU79 Q8WU79|A0A087WV97|Q8WU79-2|Q8WU79-3 Stromal membrane-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24698.24698.2 18.21 17.04 1.31 6 1 1 0 998.9923 1917.0127 S219s TMT10 210 (K) DLDLLASVPsPSSSGSR (K) DLDLLAS(0.0)VPS(0.99)PS(0.0)S(0.0)S(0.0)GS(0.0)R s:Phosphorylated S SMAP2 47127.5 3 2 1642.1 124.47 HUMAN 1 0.7866 3.1771 DLLHSEGSENEGPVS-p Q9NY27;S364-p DLLHSEGSENEGPVS 0.544853987784135 0.639436415573786 0.0813333333333333 0.0476666666666667 4.87053013345549 2.64542437918949 0.0813333333333334 0.0476666666666667 0.325796929280044 0.543822988416742 1.08027779799122 0.647340739694114 Q9NY27 PPP4R2 Q9NY27.S364.p_PPP4R2 Q9NY27_S364s _1_1_364_364 Q9NY27 Q9NY27|Q9NY27-3|Q9NY27-2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16167.16167.4 27.58 27.58 4.915 11 1 1 0 1037.718 4067.8988 S364s TMT10 357 (K) DLLHSEGsENEGPVSSSSSDCRETEELVGSNSSK (T) DLLHS(0.0)EGS(0.99)ENEGPVS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)DCRET(0.0)EELVGS(0.0)NS(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PPP4R2 47296.6 2 5 1705.1 120.12 HUMAN 1 4.8705 2.6454 DLLIPDRSPEPTREQ-p Q8WUA2;S178-p DLLIPDRSPEPTREQ 0.26937080367531 0.348011761946146 0.169 0.0893333333333334 10.8016504190023 6.07672184699391 0.169 0.0893333333333334 0.0831447741776132 0.246790146221746 2.12139527040681 1.29790696292591 Q8WUA2 PPIL4 Q8WUA2.S178.p_PPIL4 Q8WUA2_S178s _1_1_178_178 Q8WUA2 Q8WUA2 Peptidyl-prolyl cis-trans isomerase-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26761.26967.4 27.19 23.22 2.291 4 1 1 0 1073.7834 4212.141 S178s TMT10 156 (R) INHTVILDDPFDDPPDLLIPDRsPEPTREQLDSGR (I) INHT(0.0)VILDDPFDDPPDLLIPDRS(0.99)PEPT(0.0)REQLDS(0.0)GR s:Phosphorylated S PPIL4 57737.5 14 1 2034.1 101.49 HUMAN 1 10.8017 6.0767 DLLQNPNSPPTGIPL-p Q9H8K7;S424-p DLLQNPNSPPTGIPL 0.66285233269182 0.112715106214351 -0.191 0.177333333333333 3.34244838364047 12.5026050463257 -0.191 0.177333333333333 0.463185719993914 0.0562004114842122 -0.789149073356378 2.42054554092177 Q9H8K7 C10orf88 Q9H8K7.S424.p_C10orf88 Q9H8K7_S424s _1_1_424_424 Q9H8K7 Q9H8K7 Uncharacterized protein C10orf88 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.37478.37478.3 26.3 26.3 5 2 1 1 0 855.4868 2484.4751 S424s TMT10 412 (K) IALLLDLLQNPNsPPTGIPLR (H) IALLLDLLQNPNS(0.99)PPT(0.0)GIPLR s:Phosphorylated S C10orf88 49932.8 3 4 2780.1 70.89 HUMAN 1 -3.3424 12.5026 DLLRKGFSCVKNELL-p Q9Y244;S36-p DLLRKGFSCVKNELL 0.263054148508799 0.0620387747070846 0.207333333333333 0.234 10.9987260596854 16.0711516946563 0.207333333333333 0.234 0.0794561273649477 0.0247106876158603 2.15588616185858 3.07967600415633 Q9Y244 POMP Q9Y244.S36.p_POMP Q9Y244_S36s _1_1_36_36 Q9Y244 Q9Y244 Proteasome maturation protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26465.26465.4 15.84 15.84 1.515 3 1 1 0 763.6617 2971.653 S36s TMT10 34 (K) GFsCVKNELLPSHPLELSEK (N) GFS(0.99)CVKNELLPS(0.0)HPLELS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S POMP 15845.8 1 2 2587.1 77.51 HUMAN 1 10.9987 16.0712 DLMAHMASKE_____-p P04406;S333-p DLMAHMASKE_____ 0.279768059006979 0.134409105050787 0.153666666666667 0.240333333333333 10.4519471808633 11.487545809685 0.153666666666667 0.240333333333333 0.0901167004316337 0.0709978862403483 2.06035033236518 2.24069273184502 P04406 GAPDH P04406.S333.p_GAPDH P04406_S333s _1_1_333_333 P04406 P04406|P04406-2|E7EUT5 Glyceraldehyde-3-phosphate dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24608.24608.3 10.99 10.99 99 1 1 1 0 623.6517 1788.9752 S333s TMT10 324 (R) VVDLMAHMAsKE (-) VVDLMAHMAS(1.0)KE K:TMT10,s:Phosphorylated S GAPDH 36223.7 1 7 1327.1 153.64 HUMAN 1 10.4519 11.4875 DLNCEPLSPHNITPE-p Q6VMQ6-4;S121-p DLNCEPLSPHNITPE 0.712610769732366 0.678886965486163 -0.0703333333333333 0.0696666666666667 2.76859269255059 2.2989466064205 -0.0703333333333333 0.0696666666666667 0.528616519308376 0.588986498376546 -0.673005759661974 0.573962850362428 Q6VMQ6 ATF7IP Q6VMQ6.4.S121.p_ATF7IP Q6VMQ6-4_S121s _1_1_121_121 Q6VMQ6-4 Q6VMQ6-4|Q6VMQ6-5|Q6VMQ6-2 Isoform 3 of Activating transcription factor 7-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16246.16246.3 17.98 17.98 6.172 3 1 1 0 1172.2521 3434.7829 S121s TMT10 109 (K) NKQDDDLNCEPLsPHNITPEPVSK (L) NKQDDDLNCEPLS(0.99)PHNIT(0.0)PEPVS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ATF7IP 138346.3 2 3 273.1 392.91 HUMAN 1 -2.7686 2.2989 DLNGNSVSDEQDEGV-p Q2LD37;S1971-p DLNGNSVSDEQDEGV 0.0576036189507777 0.0746740062189611 0.531666666666667 0.257 27.063643239116 14.9536194977391 0.531666666666667 0.257 0.00196623614809681 0.031962301966874 5.58614774251386 2.86789266346078 Q2LD37 KIAA1109 Q2LD37.S1971.p_KIAA1109 Q2LD37_S1969sS1971s_2_2_1969_1971 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7|Q2LD37-6|Q2LD37-2 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16515.16515.4 14.62 14.62 1.262 7 2 2 0 925.9252 3539.744 N1968n S1969s S1971s TMT10 1959 (R) TSPSSDLNGnsVsDEQDEGVESDDLKK (D) T(0.0)S(0.0)PS(0.0)S(0.0)DLN(0.0)GN(0.99)S(0.99)VS(0.99)DEQDEGVES(0.0)DDLKK K:TMT10,n:Deamidated,s:Phosphorylated S KIAA1109 559693.9 2 36 143.1 520.8 HUMAN 1 27.0636 14.9536 DLNLKGPSLKGDLDA-p Q09666;S5310-p DLNLKGPSLKGDLDA 0.577290197455558 0.0226699346331302 0.0883333333333333 0.312333333333333 4.38897108969153 22.454850892765 0.0883333333333333 0.312333333333333 0.364001263400635 0.00568217899969296 0.99078909935066 4.42192319449261 Q09666 AHNAK Q09666.S5310.p_AHNAK Q09666_S5310s _1_1_5310_5310 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22106.22106.3 13.03 13.03 2.174 3 1 1 0 790.4329 2289.3091 S5310s TMT10 5308 (K) GPsLKGDLDASVPSMK (V) GPS(0.99)LKGDLDAS(0.0)VPS(0.0)MK K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 129 1.1 4313.36 HUMAN 1 4.389 22.4549 DLNSDDSTDDEAHPR-p Q9NQS7;T832-p DLNSDDSTDDEAHPR 0.996778181743058 0.0163802099933548 -0.000666666666666677 -0.352 0.0244095067328345 24.6631852771214 -0.000666666666666691 -0.352 0.9943952688078 0.00341728714040067 -0.00735485299642761 -4.95290109702864 Q9NQS7 INCENP Q9NQS7.T832.p_INCENP Q9NQS7_S828sS831sT832t_3_3_828_832 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20809.20809.3 19.32 19.32 9.162 4 3 3 0 1020.7118 2820.2216 S828s S831s T832t TMT10 817 (K) INPDNYGMDLNsDDstDDEAHPR (K) INPDNY(0.0)GMDLNS(0.99)DDS(0.99)T(0.99)DDEAHPR s:Phosphorylated S,t:Phosphorylated T INCENP 105826.3 14 36 138.1 524.38 HUMAN 1 -0.0244 -24.6632 DLPAIQESPTRDLPP-p P49796;S806-p DLPAIQESPTRDLPP 0.615535429085477 0.00949153116870816 0.0846666666666667 -0.479333333333333 3.90987300006137 28.5396755734787 0.0846666666666667 -0.479333333333333 0.406455214886711 0.00139969187840405 0.899862097960891 -5.99093815241108 P49796 RGS3 P49796.S806.p_RGS3 P49796_S806s _1_1_806_806 P49796 P49796|P49796-6|P49796-4|P49796-1 Regulator of G-protein signaling 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25192.25192.3 17.65 13.71 1.203 4 1 1 0 1236.6385 3627.9457 S806s TMT10 799 (K) DLPAIQEsPTRDLPPCQDLPPSQVSLPAK (A) DLPAIQES(0.99)PT(0.0)RDLPPCQDLPPS(0.0)QVS(0.0)LPAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RGS3 134216.1 6 5 1029.1 186.27 HUMAN 1 3.9099 -28.5397 DLPEEYLSAIYNEIA-p Q9Y6D6;S871-p DLPEEYLSAIYNEIA 0.559949997225322 0.0292617695564151 -0.0796666666666667 0.365666666666667 4.64880402058485 20.7598645730932 -0.0796666666666667 0.365666666666667 0.342862192458831 0.00839486163974253 -1.03928770902938 4.03999154791633 Q9Y6D6 ARFGEF1 Q9Y6D6.S871.p_ARFGEF1 Q9Y6D6_S871s _1_1_871_871 Q9Y6D6 Q9Y6D6 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37913.37913.3 19.42 19.42 3.151 3 1 1 0 821.7553 2383.2797 S871s TMT10 864 (K) DLPEEYLsAIYNEIAGK (K) DLPEEY(0.0)LS(0.99)AIY(0.0)NEIAGK K:TMT10,s:Phosphorylated S ARFGEF1 210988.4 1 8 381.1 335.01 HUMAN 1 -4.6488 20.7599 DLPELSDSGDEAAWE-p O60678;S27-p DLPELSDSGDEAAWE 0.682597139118178 0.979322604665725 -0.0776666666666667 0.00333333333333334 3.10819346978285 0.129958064664884 -0.0776666666666667 0.00333333333333333 0.488855665835676 0.970519338503679 -0.742303230832175 0.0386937234041966 O60678 PRMT3 O60678.S27.p_PRMT3 O60678_S25sS27s_2_2_25_27 O60678 O60678 Protein arginine N-methyltransferase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22701.23320.4 30.7 30.7 99 2 2 2 0 1043.9426 4012.8096 S25s S27s TMT10 13 (R) GAVENEEDLPELsDsGDEAAWEDEDDADLPHGK (Q) GAVENEEDLPELS(1.0)DS(1.0)GDEAAWEDEDDADLPHGK K:TMT10,s:Phosphorylated S PRMT3 60559.7 13 2 3596.1 47.49 HUMAN 1 -3.1082 0.13 DLPEPERSPRPAAGK-p Q9H0C8;S13-p DLPEPERSPRPAAGK 0.790232321960765 0.198833451009419 0.038 0.138 1.97275343623883 9.23070215305886 0.038 0.138 0.634928258353046 0.119379507999205 0.50275960348661 1.84762275195646 Q9H0C8 ILKAP Q9H0C8.S13.p_ILKAP Q9H0C8_S13s _1_1_13_13 Q9H0C8 Q9H0C8|F8SNU7|F8SNU6 Integrin-linked kinase-associated serine/threonine phosphatase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25979.25979.4 15.55 15.55 99 1 1 1 0 634.3138 2454.2649 S13s Acetyl 1 (-) MDLFGDLPEPERsPRPAAGK (E) MDLFGDLPEPERS(1.0)PRPAAGK K:TMT10,s:Phosphorylated S ILKAP 43476.3 14 1 5896.1 15.55 HUMAN 1 1.9728 9.2307 DLPERLHSQEVDLGS-p Q9H981;S468-p DLPERLHSQEVDLGS 0.0750249088591717 0.587542982414766 0.903 -0.112666666666667 24.1006030853072 3.12163862362468 0.903 -0.112666666666667 0.00388991123787357 0.487344576873283 4.81953479468897 -0.7449050092174 Q9H981 ACTR8 Q9H981.S468.p_ACTR8 Q9H981_S468s_1_1_468_468 Q9H981 Q9H981|Q9H981-2|Q9H981-3 Actin-related protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27444.27444.4 14.88 14.88 3.086 7 1 1 0 1146.2811 4501.1409 S468s N485n TMT10 457 (R) GQSSDLPERLHsQEVDLGSAQGDGLMAGnDSEEALTALMSR (K) GQS(0.0)S(0.0)DLPERLHS(0.99)QEVDLGS(0.0)AQGDGLMAGN(1.0)DS(0.0)EEALT(0.0)ALMS(0.0)R s:Phosphorylated S,n:Deamidated ACTR8 71338.2 1 2 4629.1 28.62 HUMAN 1 24.1006 -3.1216 DLPKRRLSEGVEPWR-p Q92794;S941-p DLPKRRLSEGVEPWR 0.491499299589234 0.0643864814799937 -0.140666666666667 0.286 5.67904171483164 15.8593107265814 -0.140666666666667 0.286 0.27045550673136 0.0259459111977518 -1.22716938728132 3.0390987804319 Q92794 KAT6A Q92794.S941.p_KAT6A Q92794_S941s _1_1_941_941 Q92794 Q92794 Histone acetyltransferase KAT6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13390.13390.3 10.4 10.4 99 1 1 1 0 655.3482 1884.0653 S941s Hydrogen 939 (R) RLsEGVEPWRGQLK (K) RLS(1.0)EGVEPWRGQLK K:TMT10-Lys-Only,s:Phosphorylated S KAT6A 227705.4 2 13 903.1 203.52 HUMAN 1 -5.679 15.8593 DLPKSYDYDLIIIGG-p Q16881-4;Y65-p DLPKSYDYDLIIIGG 0.622693935759629 0.080452696011015 0.0763333333333333 0.203666666666667 3.8234101297986 14.5186031276814 0.0763333333333334 0.203666666666667 0.414628343875898 0.0353296786511395 0.883220148262167 2.78689548219842 Q16881 TXNRD1 Q16881.4.Y65.p_TXNRD1 Q16881-4_Y65y _1_1_65_65 Q16881-4 Q16881|A0A087WSY9|Q16881-6|Q16881-3|A0A182DWI3|Q16881-4|A0A087WSW9 Isoform 4 of Thioredoxin reductase 1, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29507.29507.3 11.57 6.26 1.113 4 1 1 0 827.1005 2399.3222 Y65y TMT10 62 (K) SYDyDLIIIGGGSGGLAAAK (E) S(0.0)Y(0.0)DY(0.99)DLIIIGGGS(0.0)GGLAAAK K:TMT10,y:Phosphorylated Y TXNRD1 61203.2 1 2 3544.1 48.58 HUMAN 1 3.8234 14.5186 DLPLDKLSEQKQKKH-p Q6GYQ0-2;S691-p DLPLDKLSEQKQKKH 0.911605742223265 0.107098583239332 0.0173333333333333 0.196 0.786158841481328 12.8176504648711 0.0173333333333333 0.196 0.834418867986147 0.0522678882037392 0.219343575240102 2.47692359229337 Q6GYQ0 RALGAPA1 Q6GYQ0.2.S691.p_RALGAPA1 Q6GYQ0-2_S691s _1_1_691_691 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7|Q6GYQ0-4 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31502.31502.4 16.75 12.56 1.76 4 1 1 0 740.4058 2878.6381 S691s TMT10 676 (R) NLYSLDLSDLPLDKLsEQK (Q) NLY(0.0)S(0.0)LDLS(0.0)DLPLDKLS(0.99)EQK K:TMT10,s:Phosphorylated S RALGAPA1 236609.9 1 5 317.1 366.49 HUMAN 1 0.7862 12.8177 DLPLRKGTKHLSPYA-p Q9BSJ8-2;T826-p DLPLRKGTKHLSPYA 0.256760232406529 0.0235891333767165 -0.225 -0.953333333333333 11.2153571101367 22.1886621954123 -0.225 -0.953333333333333 0.075589990191253 0.00604134698906792 -2.19388185468477 -4.36054317308208 Q9BSJ8 ESYT1 Q9BSJ8.2.T826.p_ESYT1 Q9BSJ8-2_T826t _1_1_826_826 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.35165.35165.5 19.02 19.02 1.695 4 1 1 0 723.6068 3534.0332 T826t TMT10 802 (K) SAELAAALLSIYMERAEDLPLRKGtK (H) S(0.0)AELAAALLS(0.0)IY(0.0)MERAEDLPLRKGT(0.99)K K:TMT10,t:Phosphorylated T ESYT1 124514 2 6 400.1 328.2 HUMAN 1 -11.2154 -22.1887 DLPPVSGSIIWAKQI-p Q14204;S647-p DLPPVSGSIIWAKQI 0.852742978991457 0.0127451930181085 -0.036 0.525333333333333 1.34060719457891 26.4071052825913 -0.036 0.525333333333334 0.734411181689429 0.00228712273894394 -0.357261312212191 5.4019681493154 Q14204 DYNC1H1 Q14204.S647.p_DYNC1H1 Q14204_S647s _1_1_647_647 Q14204 Q14204 Cytoplasmic dynein 1 heavy chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29999.29999.3 13.92 10.19 2.162 2 1 1 0 641.0262 1841.0937 S647s TMT10 640 (R) DLPPVSGsIIWAK (Q) DLPPVS(0.0)GS(0.99)IIWAK K:TMT10,s:Phosphorylated S DYNC1H1 535136.6 1 3 1294.1 156.82 HUMAN 1 -1.3406 26.4071 DLPQRKSSLVTSKLA-p Q5T5H1;S125-p DLPQRKSSLVTSKLA 0.545642581004852 0.105174172479411 -0.169 0.391 4.85591517037666 12.9212804336132 -0.169 0.391 0.326895154343824 0.0510354509596708 -1.07758645589586 2.4955324103572 Q5T5H1 NotFound Q5T5H1.S125.p_NotFound Q5T5H1_S125s _1_1_125_125 Q5T5H1 Q5T5H1|O43768-4|A6NMQ3|O43768-3|O43768-7|O43768-9|A0A1W2PRU0|O43768-2 Alpha-endosulfine HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12206.12608.2 11.91 1.08 1.385 4 1 1 0 630.3544 1179.7349 S125s TMT10 124 (K) SsLVTSK (L) S(0.0)S(0.99)LVT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ENSA 21164.7 17 11 1520.1 134.39 HUMAN 1 -4.8559 12.9213 DLPSVNLSMPKVSGP-p Q09666;S5293-p DLPSVNLSMPKVSGP 0.270588969371857 0.00293718814219092 -0.39 0.690333333333333 10.7585744780132 38.2008328649537 -0.39 0.690333333333334 0.083973557488986 0.000151327101420465 -2.11386533337015 9.35084099843004 Q09666 AHNAK Q09666.S5293.p_AHNAK Q09666_S5293s _1_1_5293_5293 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30261.30261.5 19.38 19.12 1.219 3 1 1 0 644.157 3136.7895 S5293s TMT10 5273 (K) LEGPDVSLKGPGVDLPSVNLsMPK (V) LEGPDVS(0.0)LKGPGVDLPS(0.0)VNLS(0.99)MPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 10 127 1.1 4313.36 HUMAN 1 -10.7586 38.2008 DLQDTEISPRQNRRT-p Q9NS91;S471-p DLQDTEISPRQNRRT 0.394448562512382 0.257962444701857 -0.187666666666667 -0.211333333333333 7.45616198597226 7.75386983056139 -0.187666666666667 -0.211333333333333 0.179632039749127 0.167730876691573 -1.54064906635199 -1.5919440625938 Q9NS91 RAD18 Q9NS91.S471.p_RAD18 Q9NS91_S471s _1_1_471_471 Q9NS91 Q9NS91 E3 ubiquitin-protein ligase RAD18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11093.11093.2 15.13 12.69 2.819 2 1 1 0 798.8776 1516.7805 S471s TMT10 463 (K) NDLQDTEIsPR (Q) NDLQDT(0.0)EIS(0.99)PR s:Phosphorylated S RAD18 57077.5 2 6 1349.1 151 HUMAN 1 -7.4562 -7.7539 DLQEENESLKAHVQE-p Q86UP2;S906-p DLQEENESLKAHVQE 0.832987870919974 0.0614122223486768 -0.041 0.274333333333333 1.53256689543983 16.1347491338304 -0.041 0.274333333333333 0.702656892109683 0.0243514645986061 -0.402603377779128 3.09189888890311 Q86UP2 KTN1 Q86UP2.S906.p_KTN1 Q86UP2_S906s _1_1_906_906 Q86UP2 Q86UP2|Q86UP2-4|Q86UP2-3|Q86UP2-2|G3V4Y7 Kinectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25969.25969.3 11.39 7.04 99 1 1 1 0 724.0329 2090.117 S906s TMT10 896 (K) WLQDLQEENEsLK (A) WLQDLQEENES(1.0)LK K:TMT10,s:Phosphorylated S KTN1 156557.7 1 9 186.1 473.59 HUMAN 1 -1.5326 16.1347 DLQKCNMSPVVKIEQ-p Q9BZ95;S498-p DLQKCNMSPVVKIEQ 0.962008598547309 0.962276307646751 -0.00733333333333333 0.00566666666666669 0.32460059999561 0.238802976823702 -0.00733333333333334 0.0056666666666667 0.927982828375654 0.946498003713469 -0.0946712981306506 0.0702696842958287 Q9BZ95 WHSC1L1 Q9BZ95.S498.p_WHSC1L1 Q9BZ95_S498s _1_1_498_498 Q9BZ95 Q9BZ95|Q9BZ95-5|Q9BZ95-2|Q9BZ95-4|Q9BZ95-3 Histone-lysine N-methyltransferase NSD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32789.32789.4 17.47 17.47 12.557 2 1 1 0 819.1803 3193.7317 S498s TMT10 495 (K) CNMsPVVKIEQVFALQNATGDGK (F) CNMS(0.99)PVVKIEQVFALQNAT(0.0)GDGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NSD3 165432.8 2 3 1351.1 150.85 HUMAN 1 -0.3246 0.2388 DLQLSAASVGNCPTK-p E7ETA6;S779-p DLQLSAASVGNCPTK 0.874541241919458 0.00360332108061802 -0.0246666666666667 -0.595 1.13986530150364 36.356324918943 -0.0246666666666667 -0.595 0.769154295602474 0.000231402213065595 -0.308603337672205 -8.60718722928966 E7ETA6 PCM1 E7ETA6.S779.p_PCM1 E7ETA6_S776sS779s_2_2_776_779 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26988.26988.3 23.02 23.02 7.563 4 2 2 0 1054.5109 3001.5851 S776s S779s TMT10 763 (K) IQALQTACPDLQLsAAsVGNCPTK (K) IQALQT(0.0)ACPDLQLS(0.99)AAS(0.99)VGNCPT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCM1 229381.8 7 62 13.1 1159.95 HUMAN 1 -1.1399 -36.3563 DLQPRSHSYDRRRRH-p Q96IZ7;S61-p DLQPRSHSYDRRRRH 0.0482466396076474 0.376035760066425 0.564 0.111666666666667 29.1837675161412 5.64009876870504 0.564 0.111666666666667 0.00120676650774891 0.27289157201874 6.18757616900405 1.21990008244523 Q96IZ7 RSRC1 Q96IZ7.S61.p_RSRC1 Q96IZ7_S61s _1_1_61_61 Q96IZ7 Q96IZ7|C9J713|Q96IZ7-2|F8WDM0 Serine/Arginine-related protein 53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.2897.2897.2 7.27 2.81 1.993 3 1 1 0 615.2846 1149.5962 S61s TMT10 59 (R) SHsYDRR (R) S(0.0)HS(0.99)Y(0.0)DRR s:Phosphorylated S RSRC1 38676.4 1 4 2282.1 89.79 HUMAN 1 29.1838 5.6401 DLQSLKGSPDEENEE-p Q7Z3B3;S901-p DLQSLKGSPDEENEE 0.266891167886536 0.735702719893303 0.160666666666667 0.034 10.8736678552232 1.8378194586541 0.160666666666667 0.034 0.0817773841519352 0.654964941693685 2.13399138783511 0.472525458085759 Q7Z3B3 KANSL1 Q7Z3B3.S901.p_KANSL1 Q7Z3B3_S901s _1_1_901_901 Q7Z3B3 Q7Z3B3|A0A0G2JQF4|A0A0G2JNT7|A0A0G2JNB1|A0A0G2JQF5|A0A1W2PRB5|A0A0J9YVS1|Q7Z3B3-2|Q7Z3B3-4 KAT8 regulatory NSL complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35064.35064.5 25.72 25.72 3.188 3 1 1 0 848.4237 4158.1333 S901s TMT10 892 (R) EVDLQSLKGsPDEENEEIEDLSDAAFAALHAK (C) EVDLQS(0.0)LKGS(0.99)PDEENEEIEDLS(0.0)DAAFAALHAK K:TMT10,s:Phosphorylated S KANSL1 121821.3 2 8 391.1 332.08 HUMAN 1 10.8737 1.8378 DLRDHRHSRDLRDHR-p Q9HCD5;S66-p DLRDHRHSRDLRDHR 0.987119537498625 0.0830859537469911 0.00433333333333332 0.249 0.114025779904677 14.3060192028852 0.00433333333333333 0.249 0.974086270257275 0.0371020648098652 0.0340129023038204 2.74758719154565 Q9HCD5 NCOA5 Q9HCD5.S66.p_NCOA5 Q9HCD5_S66s _1_1_66_66 Q9HCD5 Q9HCD5 Nuclear receptor coactivator 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.2557.2557.3 9.74 3.38 99 1 1 1 0 500.9177 1420.7719 S66s TMT10 59 (R) DLRDHRHsR (D) DLRDHRHS(1.0)R s:Phosphorylated S NCOA5 65763.5 5 7 426.1 319.02 HUMAN 1 0.114 14.306 DLRKKAESFAQEMFI-p A0MZ66-3;S233-p DLRKKAESFAQEMFI 0.024620877646584 0.00182687357791697 -0.834666666666667 -0.797333333333333 37.2841039875381 43.0972067921779 -0.834666666666667 -0.797333333333333 0.000186891522178069 4.90093926771246e-05 -8.99332504750572 -11.6161560227146 A0MZ66 SHTN1 A0MZ66.3.S233.p_SHTN1 A0MZ66-3_S233s _1_1_233_233 A0MZ66-3 A0MZ66-3|A0MZ66-6|A0MZ66-5 Isoform 3 of Shootin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23237.23237.3 15.36 15.36 99 1 1 1 0 856.4463 2487.3521 S233s TMT10 230 (K) KAEsFAQEMFIEQNK (L) KAES(1.0)FAQEMFIEQNK K:TMT10,s:Phosphorylated S SHTN1 74064.4 2 3 838.1 214.92 HUMAN 1 -37.2841 -43.0972 DLRMLRMSPDTVPKA-p A0A087WZY3;S464-p DLRMLRMSPDTVPKA 0.3851629764389 0.0820472852051049 -0.137666666666667 -0.215666666666667 7.6698096173854 14.39431574789 -0.137666666666667 -0.215666666666667 0.171009027904588 0.0363553579671261 -1.57782343508173 -2.76389259191654 A0A087WZY3 NotFound A0A087WZY3.S464.p_NotFound A0A087WZY3_S464s _1_1_464_464 A0A087WZY3 A0A087WZY3|Q8TCU4|A0A087WTU9|Q8TCU4-2 Alstrom syndrome protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10182.10182.3 10.96 10.96 3.717 2 1 1 0 570.3101 1628.9446 S464s Hydrogen 463 (R) MsPDTVPKAPK (H) MS(0.99)PDT(0.0)VPKAPK K:TMT10-Lys-Only,s:Phosphorylated S ALMS1 463449.8 5 2 1397.1 146.67 HUMAN 1 -7.6698 -14.3943 DLRPGELSGEEMEES-p Q9P1Z0;S629-p DLRPGELSGEEMEES 0.292579056536687 0.00752314179680432 -0.676 0.768 10.0686838771729 30.3399605176654 -0.676 0.768 0.0984309354020818 0.000924706580540237 -1.9936457695388 6.52572951153083 Q9P1Z0 ZBTB4 Q9P1Z0.S629.p_ZBTB4 Q9P1Z0_S629sS636s_2_2_629_636 Q9P1Z0 Q9P1Z0 Zinc finger and BTB domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20912.20912.4 18.65 18.65 3.988 5 2 2 0 1306.2612 5062.1062 S629s S636s TMT10 618 (R) ISETDLRPGELsGEEMEEsEEDEEEEDEEEEEEDEEESK (A) IS(0.0)ET(0.0)DLRPGELS(0.99)GEEMEES(0.99)EEDEEEEDEEEEEEDEEES(0.0)K K:TMT10,s:Phosphorylated S ZBTB4 106081.6 1 6 2994.1 63.81 HUMAN 1 -10.0687 30.34 DLRPPPPSPSSDLTH-p Q9P275-2;S713-p DLRPPPPSPSSDLTH 0.309509753544686 0.018686426376418 -0.172333333333333 -0.595333333333333 9.52397132263783 23.7812804792909 -0.172333333333333 -0.595333333333333 0.111584242040245 0.00418670105699911 -1.8991129205664 -4.73604917732225 Q9P275 USP36 Q9P275.2.S713.p_USP36 Q9P275-2_S713s _1_1_713_713 Q9P275-2 Q9P275-2|A0A075B784 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14000.14000.5 19.27 15.62 1.106 5 1 1 0 571.4932 2773.4707 S713s TMT10 702 (R) ATGNDLRPPPPsPSSDLTHPMK (T) AT(0.0)GNDLRPPPPS(0.99)PS(0.0)S(0.0)DLT(0.0)HPMK K:TMT10,s:Phosphorylated S USP36 124218 5 12 241.1 413.35 HUMAN 1 -9.524 -23.7813 DLRRPAPSPFSSRRV-p Q96BY7;S899-p DLRRPAPSPFSSRRV 0.257790349620955 0.868466690377742 0.173666666666667 0.0196666666666667 11.1869329996325 0.86205460422675 0.173666666666667 0.0196666666666667 0.0760863411227294 0.81996353591909 2.18889128758951 0.238885997067551 Q96BY7 ATG2B Q96BY7.S899.p_ATG2B Q96BY7_S899s _1_1_899_899 Q96BY7 Q96BY7 Autophagy-related protein 2 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6967.6967.2 9.5 9.5 2.521 3 1 1 0 705.8572 1330.7429 S899s TMT10 895 (R) RPAPsPFSSR (R) RPAPS(0.99)PFS(0.0)S(0.0)R s:Phosphorylated S ATG2B 234641.2 3 7 1188.1 168.47 HUMAN 1 11.1869 0.8621 DLRSPARTPPSEEDS-p O43765;T81-p DLRSPARTPPSEEDS 0.159845829771225 0.30705697307366 -0.320666666666667 0.214333333333333 15.9447370623521 6.77641337565569 -0.320666666666667 0.214333333333333 0.0254405381472224 0.210067401071951 -3.05758639805588 1.42143574158233 O43765 SGTA O43765.T81.p_SGTA O43765_T81t _1_1_81_81 O43765 O43765 Small glutamine-rich tetratricopeptide repeat-containing protein alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2992.2992.3 18.74 18.74 1.169 4 1 1 0 636.9384 1828.8308 T81t Hydrogen 77 (R) SPARtPPSEEDSAEAER (L) S(0.0)PART(0.99)PPS(0.0)EEDS(0.0)AEAER t:Phosphorylated T SGTA 34290.7 2 2 2055.1 100.31 HUMAN 1 -15.9447 6.7764 DLRTFGQSANGQWRN-p Q9P0U3;S93-p DLRTFGQSANGQWRN 0.397920341379186 0.823066211461068 -0.183666666666667 -0.0363333333333333 7.38654570249638 1.18537324660181 -0.183666666666667 -0.0363333333333333 0.182534697210559 0.761136721664505 -1.5285206307872 -0.319719752206166 Q9P0U3 SENP1 Q9P0U3.S93.p_SENP1 Q9P0U3_S93s _1_1_93_93 Q9P0U3 Q9P0U3|Q9P0U3-2 Sentrin-specific protease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12849.12849.2 15.35 10.07 4.762 2 1 1 0 780.8621 1480.7494 S93s TMT10 89 (R) TFGQsANGQWR (N) T(0.0)FGQS(0.99)ANGQWR s:Phosphorylated S SENP1 74049.8 1 4 1420.1 144.33 HUMAN 1 -7.3865 -1.1854 DLSDIINTPLPRVPL-p J3KR72;T177-p DLSDIINTPLPRVPL 0.416481641896136 0.953839824660711 0.127666666666667 -0.01 7.02144684906556 0.292493608155152 0.127666666666667 -0.01 0.198543336141258 0.934868742226557 1.46476685000531 -0.085583839504845 J3KR72 NotFound J3KR72.T177.p_NotFound J3KR72_T177t _1_1_177_177 J3KR72 J3KR72|P49848-3|P49848-2 Transcription initiation factor TFIID subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27075.27075.3 11.77 11.77 3.775 2 1 1 0 630.9985 1811.0112 T177t TMT10 168 (K) EVDLSDIINtPLPR (V) EVDLS(0.0)DIINT(0.99)PLPR t:Phosphorylated T TAF6 79746 1 1 2409.1 84.76 HUMAN 1 7.0214 -0.2925 DLSGSIASPDVKLNL-p Q9BSR8;S34-p DLSGSIASPDVKLNL 0.245137919625009 0.841095164685509 -0.177333333333333 0.029 11.6751410988368 1.05603768222625 -0.177333333333333 0.029 0.0679963953154258 0.78414473674663 -2.27484267616519 0.287847848625672 Q9BSR8 YIPF4 Q9BSR8.S34.p_YIPF4 Q9BSR8_S34s _1_1_34_34 Q9BSR8 Q9BSR8 Protein YIPF4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34495.34495.4 7.11 7.11 1.136 8 1 1 0 1046.9807 4104.9586 S34s Acetyl 1 (-) MQPPGPPPAYAPTNGDFTFVSSADAEDLSGSIAsPDVK (L) MQPPGPPPAY(0.0)APT(0.0)NGDFT(0.0)FVS(0.0)S(0.0)ADAEDLS(0.0)GS(0.0)IAS(0.99)PDVK K:TMT10,s:Phosphorylated S YIPF4 27139.2 1 2 5831.1 15.97 HUMAN 1 -11.6751 1.056 DLSKARGSPPTSSNI-p Q9Y4E6;S935-p DLSKARGSPPTSSNI 0.837987362439317 0.335743382074166 -0.0306666666666667 0.096 1.48582737995566 6.28128278154618 -0.0306666666666667 0.096 0.710259844604129 0.23543537724928 -0.391663938776413 1.33418952871273 Q9Y4E6 WDR7 Q9Y4E6.S935.p_WDR7 Q9Y4E6_S935s _1_1_935_935 Q9Y4E6 Q9Y4E6|Q9Y4E6-2|A2RRE0 WD repeat-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13161.13161.2 15.51 15.51 5.097 4 1 1 0 911.4696 1741.9646 S935s Hydrogen 934 (R) GsPPTSSNIVQGQIK (Q) GS(0.99)PPT(0.0)S(0.0)S(0.0)NIVQGQIK K:TMT10-Lys-Only,s:Phosphorylated S WDR7 166260.7 7 2 2376.1 86.1 HUMAN 1 -1.4858 6.2813 DLSRFDASFFGVHPK-p P49327;S63-p DLSRFDASFFGVHPK 0.278485430498237 0.909261012812205 -0.180333333333333 0.016 10.5017406151195 0.577776237214817 -0.180333333333333 0.016 0.089089380395741 0.875431916909166 -2.06903098133909 0.164319164775536 P49327 FASN P49327.S63.p_FASN P49327_S63s _1_1_63_63 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21837.21837.3 11.39 8.53 99 1 1 1 0 520.9202 1480.7786 S63s Hydrogen 60 (R) FDAsFFGVHPK (Q) FDAS(1.0)FFGVHPK K:TMT10-Lys-Only,s:Phosphorylated S FASN 276046.1 2 1 175.1 481.87 HUMAN 1 -10.5017 0.5778 DLSRGSLSPGGERAC-p E7EWN3;S1062-p DLSRGSLSPGGERAC 0.787469970455088 0.520159264742113 -0.0406666666666667 -0.0626666666666667 2.00373419386567 3.81367963476195 -0.0406666666666667 -0.0626666666666667 0.630415061650526 0.415558372310362 -0.509628845540126 -0.881198241434344 E7EWN3 SETD5 E7EWN3.S1062.p_SETD5 E7EWN3_S1062s _1_1_1062_1062 E7EWN3 E7EWN3|Q9C0A6|Q9C0A6-3|Q9C0A6-2 SET domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10208.10208.3 16 10.5 2.101 3 1 1 0 919.7677 2677.3314 S1062s TMT10 1059 (R) GSLsPGGERACEGVPSAPQNPPQR (K) GS(0.0)LS(0.99)PGGERACEGVPS(0.0)APQNPPQR C:Carbamidomethylation,s:Phosphorylated S SETD5 161030.5 3 11 773.1 227.48 HUMAN 1 -2.0037 -3.8137 DLSRILKSPEIQRAL-p P36578;S295-p DLSRILKSPEIQRAL 0.671374778439016 0.00974302664593032 -0.0676666666666667 -0.499 3.24090030082257 28.315373919294 -0.0676666666666667 -0.499 0.474143684172984 0.00147388163710336 -0.768931195895823 -5.9267954603622 P36578 RPL4 P36578.S295.p_RPL4 P36578_S295s _1_1_295_295 P36578 P36578|H3BM89 60S ribosomal protein L4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13966.13966.3 12.16 12.16 99 1 1 1 0 541.3203 1541.9779 S295s TMT10 292 (R) ILKsPEIQR (A) ILKS(1.0)PEIQR K:TMT10,s:Phosphorylated S RPL4 47981.8 4 4 2767.1 71.26 HUMAN 1 -3.2409 -28.3154 DLSRNRLSEIPIEAC-p Q96II8-2;S95-p DLSRNRLSEIPIEAC 0.185461409283341 0.389565476128797 -0.266333333333333 -0.145666666666667 14.3800500630322 5.44469871092695 -0.266333333333333 -0.145666666666667 0.0364749742270909 0.285450053610209 -2.76296738660186 -1.18470544706382 Q96II8 LRCH3 Q96II8.2.S95.p_LRCH3 Q96II8-2_S95s _1_1_95_95 Q96II8-2 Q96II8-2|Q96II8-4|Q96II8-3 Isoform 2 of Leucine-rich repeat and calponin homology domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30636.30636.4 21.41 21.41 13.236 3 1 1 0 903.6991 3531.8038 S95s TMT10 92 (R) NRLsEIPIEACHFVSLENLNLYQNCIR (Y) NRLS(0.99)EIPIEACHFVS(0.0)LENLNLY(0.0)QNCIR C:Carbamidomethylation,s:Phosphorylated S LRCH3 90369.5 1 2 1119.1 175.39 HUMAN 1 -14.3801 -5.4447 DLSTLTASEIKTLPI-p Q5UIP0;S2339-p DLSTLTASEIKTLPI 0.338038342621858 0.00433205919333218 -0.141333333333333 -0.591333333333333 8.76805953967775 34.7313876167626 -0.141333333333333 -0.591333333333333 0.132798768004867 0.000336404067547981 -1.76821371855426 -7.99584953793698 Q5UIP0 RIF1 Q5UIP0.S2339.p_RIF1 Q5UIP0_S2339s _1_1_2339_2339 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25764.25764.3 16.9 14.78 2.67 5 1 1 0 663.0294 1907.1101 S2339s TMT10 2329 (K) TIGDLSTLTAsEIK (T) T(0.0)IGDLS(0.0)T(0.0)LT(0.0)AS(0.99)EIK K:TMT10,s:Phosphorylated S RIF1 276628.8 2 36 29.1 922.06 HUMAN 1 -8.7681 -34.7314 DLSTLTHSIVRRRYL-p Q9BW71;S27-p DLSTLTHSIVRRRYL 0.450916708217697 0.189347045925725 -0.114333333333333 -0.168333333333333 6.38628409729584 9.50363831986471 -0.114333333333333 -0.168333333333333 0.229811411545038 0.112107887235644 -1.35309723668603 -1.8948650101297 Q9BW71 HIRIP3 Q9BW71.S27.p_HIRIP3 Q9BW71_S27s _1_1_27_27 Q9BW71 Q9BW71|Q9BW71-2|Q9BW71-3 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15574.15574.3 12.01 12.01 2.195 4 1 1 0 621.0022 1781.0231 S27s TMT10 17 (R) GRPDLSTLTHsIVR (R) GRPDLS(0.0)T(0.0)LT(0.0)HS(0.99)IVR s:Phosphorylated S HIRIP3 62298.3 1 1 178.1 481.23 HUMAN 1 -6.3863 -9.5036 DLTPLEGSLEEMKEA-p Q8NEM0;S548-p DLTPLEGSLEEMKEA 0.234733568977743 0.0093500591215775 -0.283666666666667 -0.455666666666667 12.0695481689906 28.6424319064487 -0.283666666666667 -0.455666666666667 0.0620933631522316 0.00136696315677314 -2.34467657211264 -6.02050196563527 Q8NEM0 MCPH1 Q8NEM0.S548.p_MCPH1 Q8NEM0_S548s _1_1_548_548 Q8NEM0 Q8NEM0|Q8NEM0-3|Q8NEM0-2 Microcephalin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20841.20841.3 16.93 13.9 3.824 2 1 1 0 808.7185 2344.1743 S548s TMT10 537 (K) GHDDDLTPLEGsLEEMK (E) GHDDDLT(0.0)PLEGS(0.99)LEEMK K:TMT10,s:Phosphorylated S MCPH1 94330.9 1 4 3936.1 40.48 HUMAN 1 -12.0695 -28.6424 DLTRTFPSGGEEEAK-p Q9C0C2;S406-p DLTRTFPSGGEEEAK 0.588016328588642 0.686711672984374 0.107333333333333 0.05 4.24670153391878 2.23441108995626 0.107333333333333 0.0500000000000001 0.376122961179452 0.597804102354951 0.9640027534138 0.560042330553036 Q9C0C2 TNKS1BP1 Q9C0C2.S406.p_TNKS1BP1 Q9C0C2_S406s _1_1_406_406 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14231.14231.5 20.12 20.12 2.266 4 1 1 0 624.9235 3040.6216 S406s TMT10 403 (R) TFPsGGEEEAKGDAHLRPTSLVQR (R) T(0.0)FPS(0.99)GGEEEAKGDAHLRPT(0.0)S(0.0)LVQR K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 4 12 4.1 2105.7 HUMAN 1 4.2467 2.2344 DLTVHRATPEDLVRR-p Q8N0Z3;T45-p DLTVHRATPEDLVRR 0.444420732314114 0.836760567094068 -0.119666666666667 0.026 6.49063203021488 1.08720965015823 -0.119666666666667 0.026 0.224355539465497 0.778536601544886 -1.37152206584586 0.295583759284034 Q8N0Z3 SPICE1 Q8N0Z3.T45.p_SPICE1 Q8N0Z3_T45t _1_1_45_45 Q8N0Z3 Q8N0Z3 Spindle and centriole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22939.22939.5 19.23 19.23 1.186 6 1 1 0 710.5688 3468.8487 T45t TMT10 26 (K) TSVKQEWDNTVTDLTVHRAtPEDLVR (R) T(0.0)S(0.0)VKQEWDNT(0.0)VT(0.0)DLT(0.0)VHRAT(0.99)PEDLVR K:TMT10,t:Phosphorylated T SPICE1 96605.1 3 1 556.1 273.19 HUMAN 1 -6.4906 1.0872 DLVDGRHSPPMVRSV-p O60256;S227-p DLVDGRHSPPMVRSV 0.82619699417303 0.763057248401207 0.033 -0.0293333333333333 1.59990122859081 1.62331479556781 0.033 -0.0293333333333333 0.691846705380188 0.688126876212585 0.418253917309425 -0.423620443000476 O60256 PRPSAP2 O60256.S227.p_PRPSAP2 O60256_S227s _1_1_227_227 O60256 O60256|O60256-2|O60256-3|O60256-4 Phosphoribosyl pyrophosphate synthase-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20866.21075.5 26.47 26.47 2.867 2 1 1 0 656.5312 3198.6527 S227s TMT10 205 (R) LGIAVIHGEAQDAESDLVDGRHsPPMVR (S) LGIAVIHGEAQDAES(0.0)DLVDGRHS(0.99)PPMVR s:Phosphorylated S PRPSAP2 41324.4 26 5 2642.1 75.43 HUMAN 1 1.5999 -1.6233 DLVKQCRTPPQQKSP-p G3V1S3;T1097-p DLVKQCRTPPQQKSP 0.342040634077347 0.703014532503966 -0.172 -0.0443333333333333 8.6593643850036 2.10374897566912 -0.172 -0.0443333333333333 0.136164395232106 0.616062966038371 -1.74939790765857 -0.53159443304434 G3V1S3 DENND5B G3V1S3.T1097.p_DENND5B G3V1S3_T1097t _1_1_1097_1097 G3V1S3 G3V1S3|Q6ZUT9 DENN domain-containing protein 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3779.3779.3 12.22 5.68 99 1 1 1 0 560.9605 1600.8994 T1097t TMT10 1094 (K) QCRtPPQQK (S) QCRT(1.0)PPQQK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T DENND5B 150883.3 2 2 3394.1 52.14 HUMAN 1 -8.6594 -2.1037 DLVPPAGSPELSPPQ-p Q9UPS6;S1659-p DLVPPAGSPELSPPQ 0.453645605913133 0.383526066734253 0.117 -0.084 6.33375539497416 5.53109348885069 0.117 -0.084 0.232607900017218 0.279827666652167 1.34380880302822 -1.20029009331776 Q9UPS6 SETD1B Q9UPS6.S1659.p_SETD1B Q9UPS6_S1659s _1_1_1659_1659 Q9UPS6 Q9UPS6|Q9UPS6-2|A0A0A0MQV9 Histone-lysine N-methyltransferase SETD1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18428.18745.4 14.9 17.23 3.664 2 1 1 0 751.1455 2921.5947 S1659s TMT10 1649 (K) RHEDLVPPAGsPELSPPQPLFRPR (S) RHEDLVPPAGS(0.99)PELS(0.0)PPQPLFRPR s:Phosphorylated S SETD1B 213997.2 6 24 570.1 269.37 HUMAN 1 6.3338 -5.5311 DLVSFPLSPAVRVKL-p O43502;S20-p DLVSFPLSPAVRVKL 0.607175432428294 0.00554351977683076 -0.0876666666666667 -0.529 4.00967932592935 32.7020337643239 -0.0876666666666667 -0.529 0.397220878355427 0.000536780367798033 -0.918979368442035 -7.28531319037631 O43502 RAD51C O43502.S20.p_RAD51C O43502_S20s _1_1_20_20 O43502 O43502|J3QKK3|O43502-2|Q7KZJ0|E9PI66 DNA repair protein RAD51 homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27830.27830.2 15.7 15.7 3.504 2 1 1 0 805.4324 1529.8889 S20s TMT10 13 (R) DLVSFPLsPAVR (V) DLVS(0.0)FPLS(0.99)PAVR s:Phosphorylated S RAD51C 42759.4 4 1 4486.1 30.8 HUMAN 1 -4.0097 -32.702 DLWPRIASNAGSIA_-p P62829;S134-p DLWPRIASNAGSIA_ 0.442576911802471 0.756036718889476 0.217666666666667 0.051 6.5224342131666 1.6792005135412 0.217666666666667 0.051 0.222718646514384 0.679328677745336 1.37713061996666 0.436477581474709 P62829 RPL23 P62829.S134.p_RPL23 P62829_S134s _1_1_134_134 P62829 P62829|J3KTJ3 60S ribosomal protein L23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15571.15571.2 7.55 7.55 3.408 2 1 1 0 556.7819 1032.5887 S134s TMT10 132 (R) IAsNAGSIA (-) IAS(0.99)NAGS(0.0)IA s:Phosphorylated S RPL23 14979.3 1 3 3704.1 44.92 HUMAN 1 6.5224 1.6792 DLWSSRGSGGWGVYR-p Q96PE2;S410-p DLWSSRGSGGWGVYR 0.37027673510532 0.423027266800273 -0.375333333333333 -0.157666666666667 8.00113927620374 4.97510668343468 -0.375333333333333 -0.157666666666667 0.1584477485064 0.318045556021493 -1.63535824448303 -1.0992730426971 Q96PE2 ARHGEF17 Q96PE2.S410.p_ARHGEF17 Q96PE2_S410s _1_1_410_410 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13533.13533.2 9.31 9.31 9.314 2 1 1 0 624.2925 1167.6108 S410s TMT10 409 (R) GsGGWGVYR (S) GS(0.99)GGWGVY(0.0)R s:Phosphorylated S ARHGEF17 223779.6 1 13 30.1 908.19 HUMAN 1 -8.0011 -4.9751 DLWVKSLSPQDRAAY-p P17480;S638-p DLWVKSLSPQDRAAY 0.515476568082995 0.917974155438944 -0.120666666666667 0.0143333333333333 5.31480182315609 0.52342386334199 -0.120666666666667 0.0143333333333333 0.294116790177847 0.886456877223574 -1.16144701641888 0.149640719256523 P17480 UBTF P17480.S638.p_UBTF P17480_S638s _1_1_638_638 P17480 P17480|E9PKP7|P17480-2 Nucleolar transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5987.5987.2 11.09 2.99 2.501 2 1 1 0 556.2715 1031.5683 S638s TMT10 636 (K) SLsPQDR (A) S(0.0)LS(0.99)PQDR s:Phosphorylated S UBTF 89746.7 1 9 1312.1 155.17 HUMAN 1 -5.3148 0.5234 DLYERERSKKRDRSR-p Q8WUA2;S471-p DLYERERSKKRDRSR 0.146990936939054 0.0848714755289993 -0.327333333333333 -0.489333333333333 16.9084328140902 14.1802774177699 -0.327333333333333 -0.489333333333333 0.0203777729306072 0.03819198738587 -3.24462154208195 -2.72441826275326 Q8WUA2 PPIL4 Q8WUA2.S471.p_PPIL4 Q8WUA2_S471s _1_1_471_471 Q8WUA2 Q8WUA2 Peptidyl-prolyl cis-trans isomerase-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8586.8586.5 8.8 8.8 8.798 5 1 1 0 514.8764 2490.3919 S471s TMT10 459 (K) SKYQTDLYERERsK (K) S(0.0)KY(0.0)QT(0.0)DLY(0.0)ERERS(0.99)K K:TMT10,s:Phosphorylated S PPIL4 57737.5 1 4 2034.1 101.49 HUMAN 1 -16.9084 -14.1803 DLYSPRYSFSEDTKS-p Q9BX66-12;S254-p DLYSPRYSFSEDTKS 0.804458682239313 0.519556235627236 -0.037 -0.109666666666667 1.8217331176893 3.82096060342539 -0.037 -0.109666666666667 0.657395441427708 0.414862270297548 -0.46895136183178 -0.882602912235241 Q9BX66 SORBS1 Q9BX66.12.S254.p_SORBS1 Q9BX66-12_S254s _1_1_254_254 Q9BX66-12 Q9BX66-12|Q9BX66-11|Q9BX66-2|Q9BX66-5|Q9BX66-3|Q9BX66-6 Isoform 12 of Sorbin and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14694.14694.2 8.66 8.66 2.218 4 1 1 0 757.8619 1434.7517 S254s TMT10 253 (R) YsFSEDTK (S) Y(0.0)S(0.99)FS(0.0)EDT(0.0)K K:TMT10,s:Phosphorylated S SORBS1 144537.7 1 4 2166.1 94.72 HUMAN 1 -1.8217 -3.821 DLYVVGGSIPRRMWK-p A0A075B6T4;S318-p DLYVVGGSIPRRMWK 0.118403246417576 0.00526062627901912 0.571666666666667 -0.644 19.2739605718294 33.1289471058433 0.571666666666667 -0.644 0.0118196316642712 0.000486525143498981 3.72483787127375 -7.43014342930491 A0A075B6T4 NotFound A0A075B6T4.S318.p_NotFound A0A075B6T4_S318s _1_1_318_318 A0A075B6T4 A0A075B6T4|Q9NVX7-2 Kelch repeat and BTB domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15149.15149.3 14.78 14.78 6.965 2 1 1 0 579.2975 1655.9067 S318s TMT10 308 (K) HGGDLYVVGGsIPR (R) HGGDLY(0.0)VVGGS(0.99)IPR s:Phosphorylated S KBTBD4 62035.1 1 2 4219.1 35.18 HUMAN 1 19.274 -33.1289 DMAPGLGSETRLDRS-p Q96S15;S626-p DMAPGLGSETRLDRS 0.372465830543894 0.714270369299129 -0.124333333333333 -0.057 7.95813417607692 2.01234271343808 -0.124333333333333 -0.057 0.160024538131063 0.629166700095108 -1.6278971460342 -0.511474171446057 Q96S15 WDR24 Q96S15.S626.p_WDR24 Q96S15_S626s _1_1_626_626 Q96S15 Q96S15|Q96S15-2 GATOR complex protein WDR24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13613.13613.3 12.64 10.96 2.756 2 1 1 0 609.6275 1746.9006 S626s TMT10 619 (K) DMAPGLGsETRLDR (S) DMAPGLGS(0.99)ET(0.0)RLDR s:Phosphorylated S WDR24 103984.5 1 4 2568.1 78.27 HUMAN 1 -7.9581 -2.0123 DMASRRLSAQAHPAG-p Q2TAZ0-3;S403-p DMASRRLSAQAHPAG 0.156660171113659 0.932683878285438 -0.317333333333333 -0.0163333333333333 16.1540514039571 0.426771455155776 -0.317333333333333 -0.0163333333333333 0.0242434743829768 0.906406172779622 -3.09782590759548 -0.123174340938798 Q2TAZ0 ATG2A Q2TAZ0.3.S403.p_ATG2A Q2TAZ0-3_S403s _1_1_403_403 Q2TAZ0-3 Q2TAZ0-3 Isoform 2 of Autophagy-related protein 2 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5021.5021.3 8.48 8.48 99 1 1 1 0 558.6456 1593.9589 S403s TMT10 401 (R) RLsAQAHPAGK (M) RLS(1.0)AQAHPAGK K:TMT10,s:Phosphorylated S ATG2A 215251.5 1 2 2029.1 101.69 HUMAN 1 -16.1541 -0.4268 DMDDGRHSPPMVKNA-p Q14558;S215-p DMDDGRHSPPMVKNA 0.661253246820461 0.452574790517004 0.0596666666666667 0.0843333333333333 3.36303586739294 4.58887643318516 0.0596666666666667 0.0843333333333334 0.460995210437334 0.347626084439996 0.793231855653764 1.02795469194555 Q14558 PRPSAP1 Q14558.S215.p_PRPSAP1 Q14558_S215s _1_1_215_215 Q14558 Q14558-2|B4DP31 Phosphoribosyl pyrophosphate synthase-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.39139.39661.5 27.26 27.26 4.883 2 1 1 0 723.7579 3534.7908 S215s TMT10 193 (R) LGLAVIHGEAQCTELDMDDGRHsPPMVK (N) LGLAVIHGEAQCT(0.0)ELDMDDGRHS(0.99)PPMVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRPSAP1 39678.3 57 3 3267.1 55.48 HUMAN 1 3.363 4.5889 DMDDVESSEEEEEED-p Q8NAV1;S194-p DMDDVESSEEEEEED 0.502812376540683 0.0489572362676222 0.0945 0.251833333333333 5.50758551304589 17.5239907918828 0.0945 0.251833333333333 0.281346455864787 0.0176848312789946 1.19631633715442 3.36390005405823 Q8NAV1 PRPF38A Q8NAV1.S194.p_PRPF38A Q8NAV1_S193sS194s_2_2_193_194 Q8NAV1 Q8NAV1 Pre-mRNA-splicing factor 38A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23272.23748.3 19.49 19.49 15.097 3 2 2 0 1097.4419 3130.3669 S193s S194s TMT10 181 (R) VSALEEDMDDVEssEEEEEEDEK (L) VS(0.0)ALEEDMDDVES(0.99)S(0.99)EEEEEEDEK K:TMT10,s:Phosphorylated S PRPF38A 37704.1 9 5 1570.1 130.77 HUMAN 2 5.5076 17.524 DMEDGQLSDSDSDMT-p Q9H814;S14-p DMEDGQLSDSDSDMT 0.546344237168964 0.00896633802637028 0.0796666666666667 0.426666666666667 4.84637831080742 29.0036183737586 0.0796666666666667 0.426666666666667 0.327613786240492 0.0012578769606265 1.07582946877196 6.12532090385395 Q9H814 PHAX Q9H814.S14.p_PHAX Q9H814_S14s_1_1_14_14 Q9H814 Q9H814 Phosphorylated adapter RNA export protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27176.27176.3 22.82 22.89 2.169 5 1 1 0 1261.9155 3687.7567 M8m S14s Acetyl 2 (M) ALEVGDmEDGQLsDSDSDMTVAPSDRPLQLPK (V) ALEVGDM(0.99)EDGQLS(0.99)DS(0.0)DS(0.0)DM(0.0)T(0.0)VAPS(0.0)DRPLQLPK K:TMT10,m:Oxidized methionine,s:Phosphorylated S PHAX 44573 16 1 2401.1 85.13 HUMAN 1 4.8464 29.0036 DMEDLFGSDADSEAE-p Q8WVC0;S10-p DMEDLFGSDADSEAE 0.207422631751664 0.00447141416715581 -0.219 1.01066666666667 13.2001705817304 34.4994010587723 -0.219 1.01066666666667 0.0478611293109343 0.000354862325388744 -2.54719993877741 7.91173222310143 Q8WVC0 LEO1 Q8WVC0.S10.p_LEO1 Q8WVC0_S10s _1_1_10_10 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24266.24964.3 17.6 17.6 2.419 2 1 1 0 779.6661 2257.0128 S10s Acetyl 2 (M) ADMEDLFGsDADSEAERK (D) ADMEDLFGS(0.99)DADS(0.0)EAERK K:TMT10,s:Phosphorylated S LEO1 75516.9 1 1 514.1 286.88 HUMAN 1 -13.2002 34.4994 DMEEEKESEDSDEEN-p Q8IWA0;S779-p DMEEEKESEDSDEEN 0.31825335451179 0.054726883722544 -0.318 0.231333333333333 9.31073654646881 16.8173135340645 -0.318 0.231333333333333 0.117199658265202 0.0208098354726741 -1.86216725890652 3.22431525527928 Q8IWA0 WDR75 Q8IWA0.S779.p_WDR75 Q8IWA0_S779sS782s_2_2_779_782 Q8IWA0 Q8IWA0 WD repeat-containing protein 75 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21794.22428.4 23.63 23.63 5.769 3 2 2 0 991.9214 3804.726 S779s S782s TMT10 766 (K) EIPEDVDMEEEKEsEDsDEENDFTEK (V) EIPEDVDMEEEKES(0.99)EDS(0.99)DEENDFT(0.0)EK K:TMT10,s:Phosphorylated S WDR75 95980.4 24 8 1418.1 144.36 HUMAN 1 -9.3107 16.8173 DMEEKDYSEADGLSE-p Q9H4G0;S69-p DMEEKDYSEADGLSE 0.373235049738538 0.0035375820744429 -0.154333333333333 1.47566666666667 7.9323818819999 36.6001036339825 -0.154333333333333 1.47566666666667 0.160976252103027 0.000218770941887808 -1.62342843845882 8.70235452420291 Q9H4G0 EPB41L1 Q9H4G0.S69.p_EPB41L1 Q9H4G0_S69s _1_1_69_69 Q9H4G0 Q9H4G0|A0A0C4DH22 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10607.10607.2 15.08 15.08 4.322 3 1 1 0 775.8318 1470.691 S69s TMT10 67 (K) DYsEADGLSER (T) DY(0.0)S(0.99)EADGLS(0.0)ER s:Phosphorylated S EPB41L1 99071.6 1 4 174.1 483.37 HUMAN 1 -7.9324 36.6001 DMELNSSSEDSKGSK-p O15014;S454-p DMELNSSSEDSKGSK 0.43536856953517 0.132939760585225 -0.109333333333333 0.173333333333333 6.6492851561744 11.5499027959759 -0.109333333333333 0.173333333333333 0.216307453405873 0.0699857660078696 -1.3994716865632 2.25167044277781 O15014 ZNF609 O15014.S454.p_ZNF609 O15014_S452sS453sS454s_3_3_452_454 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19687.19687.3 10.02 10.02 1.112 5 3 3 0 936.7523 2568.343 S452s S453s S454s TMT10 442 (K) NKPLSDMELNsssEDSK (G) NKPLS(0.0)DMELNS(0.99)S(0.99)S(0.99)EDS(0.0)K K:TMT10,s:Phosphorylated S ZNF609 152443.5 1 39 63.1 699.07 HUMAN 1 -6.6493 11.5499 DMGNMSASDLDVADR-p Q9NV70-2;S486-p DMGNMSASDLDVADR 0.992673933370547 0.827997326502654 0.00166666666666666 -0.024 0.0684103077658041 1.14635663829931 0.00166666666666666 -0.024 0.984371359277359 0.768005510553546 0.0205102923775091 -0.310166806709819 Q9NV70 EXOC1 Q9NV70.2.S486.p_EXOC1 Q9NV70-2_S484sS486s_2_2_484_486 Q9NV70-2 Q9NV70|Q9NV70-2 Isoform 2 of Exocyst complex component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23284.23284.4 14.39 14.39 1.212 7 2 2 0 946.1958 3605.8394 M483m S484s S486s TMT10 472 (R) SQSSSLLDMGNmsAsDLDVADRTKFDK (I) S(0.0)QS(0.0)S(0.0)S(0.0)LLDM(0.0)GNM(0.99)S(0.99)AS(0.99)DLDVADRT(0.0)KFDK K:TMT10,m:Oxidized methionine,s:Phosphorylated S EXOC1 101136.7 10 13 871.2 209.68 HUMAN 1 0.0684 -1.1464 DMKAFMGTPVQKLDL-p P46013;T2285-p DMKAFMGTPVQKLDL 0.207348309752727 0.00455061128120994 0.400333333333333 -0.912666666666667 13.2026619425687 34.3239031572828 0.400333333333333 -0.912666666666667 0.0478336813111317 0.000369495951500448 2.54765046525365 -7.84860598288042 P46013 MKI67 P46013.T2285.p_MKI67 P46013_T2285t _1_1_2285_2285 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26893.26893.4 17.38 10.11 7.205 2 1 1 0 710.1473 2757.594 T2285t TMT10 2281 (K) AFMGtPVQKLDLPGNLPGSK (R) AFMGT(0.99)PVQKLDLPGNLPGS(0.0)K K:TMT10,t:Phosphorylated T MKI67 360912.4 3 77 5.1 1918.46 HUMAN 1 13.2027 -34.3239 DMKMRSFSPTMKVPV-p A3KN83;S214-p DMKMRSFSPTMKVPV 0.713414096649528 0.00829912119026097 0.0893333333333333 0.837 2.76272528822683 29.5880646764087 0.0893333333333334 0.837 0.529331173325471 0.00109949569274492 0.671792857458987 6.29796121910612 A3KN83 SBNO1 A3KN83.S214.p_SBNO1 A3KN83_S214s _1_1_214_214 A3KN83 A3KN83|A3KN83-2 Protein strawberry notch homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22643.22643.3 8.92 5.56 2.211 3 1 1 0 696.4026 2007.228 S214s TMT10 212 (R) SFsPTMKVPVVK (E) S(0.0)FS(0.99)PT(0.0)MKVPVVK K:TMT10,s:Phosphorylated S SBNO1 154994.1 5 1 861.1 210.54 HUMAN 1 2.7627 29.5881 DMKTLGVSFVQAESE-p O60826;S361-p DMKTLGVSFVQAESE 0.714362411847493 0.119469726003301 -0.0653333333333333 -0.200666666666667 2.75379105877205 12.1660046952457 -0.0653333333333333 -0.200666666666667 0.530421224908733 0.0607294755267994 -0.669944913457748 -2.36061716409809 O60826 CCDC22 O60826.S361.p_CCDC22 O60826_S361s _1_1_361_361 O60826 O60826 Coiled-coil domain-containing protein 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22007.22007.3 11.17 11.17 3.346 3 1 1 0 631.3005 1811.9159 S361s TMT10 357 (K) TLGVsFVQAESECR (H) T(0.0)LGVS(0.99)FVQAES(0.0)ECR C:Carbamidomethylation,s:Phosphorylated S CCDC22 71096.6 1 4 3114.1 60.34 HUMAN 1 -2.7538 -12.166 DMLSPIHTPQRTVFN-p O60784-2;T164-p DMLSPIHTPQRTVFN 0.684824732088841 0.0439233378234468 0.071 -0.280666666666667 3.08396203881261 18.1812588114245 0.071 -0.280666666666667 0.491590856077921 0.0152010685979351 0.737414944666053 -3.49614327259908 O60784 TOM1 O60784.2.T164.p_TOM1 O60784-2_S160sT164t_2_2_160_164 O60784-2 O60784-2|O60784-4 Isoform 2 of Target of Myb protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30065.30065.4 20.74 18.14 6.981 3 2 2 0 761.8755 2884.5465 S160s T164t TMT10 147 (R) KGLEFPMTDLDMLsPIHtPQR (T) KGLEFPMT(0.0)DLDMLS(0.99)PIHT(0.99)PQR K:TMT10,s:Phosphorylated S,t:Phosphorylated T TOM1 54158.9 6 8 1385.1 148 HUMAN 1 3.084 -18.1813 DMPSTPPTPHSREKG-p Q9UBY0;T749-p DMPSTPPTPHSREKG 0.412507711448368 0.267378888373733 0.132 0.113666666666667 7.09330085544084 7.54338636436633 0.132 0.113666666666667 0.195285462431262 0.176060270009508 1.47733535565985 1.5553704736983 Q9UBY0 SLC9A2 Q9UBY0.T749.p_SLC9A2 Q9UBY0_T746tT749t_2_2_746_749 Q9UBY0 Q9UBY0 Sodium/hydrogen exchanger 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16102.16312.5 15.02 15.02 1.528 5 2 2 0 698.1182 3326.6298 T746t T749t TMT10 729 (K) MEWKNEVDVDSGRDMPStPPtPHSR (E) MEWKNEVDVDS(0.0)GRDMPS(0.0)T(0.99)PPT(0.99)PHS(0.0)R K:TMT10,t:Phosphorylated T SLC9A2 92088.6 5 14 1290.1 157.7 HUMAN 1 7.0933 7.5434 DMPVKPYSDGEGGIE-p Q92621;S1153-p DMPVKPYSDGEGGIE 0.536851918203613 0.120290643439018 0.0826666666666667 0.188333333333333 4.99841483330719 12.1280603210696 0.0826666666666667 0.188333333333333 0.316343209623892 0.06126239453815 1.10376760504634 2.35388042845081 Q92621 NUP205 Q92621.S1153.p_NUP205 Q92621_S1153s _1_1_1153_1153 Q92621 Q92621 Nuclear pore complex protein Nup205 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32677.32677.4 24.66 24.66 6.609 2 1 1 0 866.6849 3383.7557 S1153s TMT10 1139 (R) LLHLLLDDMPVKPYsDGEGGIEDENR (S) LLHLLLDDMPVKPY(0.0)S(0.99)DGEGGIEDENR K:TMT10,s:Phosphorylated S NUP205 230313.6 3 3 2077.1 98.86 HUMAN 1 4.9984 12.1281 DMRILELTPEPDRPR-p Q14004-2;T1186-p DMRILELTPEPDRPR 0.796322935903483 0.745586867670334 -0.0416666666666667 0.0336666666666667 1.90937414580513 1.75960615513957 -0.0416666666666667 0.0336666666666667 0.644262102312393 0.666867242081269 -0.48863742818826 0.454830947577377 Q14004 CDK13 Q14004.2.T1186.p_CDK13 Q14004-2_T1186t _1_1_1186_1186 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17459.17459.3 17.83 17.83 99 1 1 1 0 582.3114 1664.9533 T1186t TMT10 1182 (R) ILELtPEPDRPR (I) ILELT(1.0)PEPDRPR t:Phosphorylated T CDK13 159173.6 6 16 145.1 520.12 HUMAN 1 -1.9094 1.7596 DMTLPGISPPPEKQK-p B5MBX0;S209-p DMTLPGISPPPEKQK 0.43773303002828 0.00298393706599723 0.189 -0.878666666666667 6.60934835315145 37.9419192169126 0.189 -0.878666666666667 0.218305744899674 0.000160623127680793 1.39244305860563 -9.24310739279442 B5MBX0 NotFound B5MBX0.S209.p_NotFound B5MBX0_S209s _1_1_209_209 B5MBX0 B5MBX0|Q96FF9 Sororin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27359.27359.3 23.93 23.93 7.521 2 1 1 0 1020.2073 2978.6451 S209s TMT10 194 (R) VCAKPWAPDMTLPGIsPPPEK (Q) VCAKPWAPDMT(0.0)LPGIS(0.99)PPPEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CDCA5 34133.5 5 8 682.1 245.26 HUMAN 1 6.6093 -37.9419 DNAEAAFSDDEEDLN-p Q68E01;S537-p DNAEAAFSDDEEDLN 0.954896370191648 0.609784297999937 0.0106666666666667 0.167 0.393702704793262 2.91868112292215 0.0106666666666667 0.167 0.913334219591596 0.510660055039369 0.114018456956818 0.703749314196333 Q68E01 INTS3 Q68E01.S537.p_INTS3 Q68E01_S537s _1_1_537_537 Q68E01 Q68E01|Q68E01-2|Q68E01-3|Q68E01-4 Integrator complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19212.19212.4 18.79 18.79 7.321 4 1 1 0 766.3202 2982.2835 S537s TMT10 525 (K) DESCYDNAEAAFsDDEEDLNSK (G) DES(0.0)CY(0.0)DNAEAAFS(0.99)DDEEDLNS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S INTS3 119608.2 2 2 1627.1 125.71 HUMAN 1 0.3937 2.9187 DNAVEIPSFSKGIIN-p O75717;S348-p DNAVEIPSFSKGIIN 0.869521280017076 0.0133100943998095 0.0243333333333333 -0.39 1.18665834459145 26.0926941673751 0.0243333333333333 -0.39 0.76091153101428 0.0024588417762185 0.320065882107662 -5.31893324478969 O75717 WDHD1 O75717.S348.p_WDHD1 O75717_S348s_1_1_348_348 O75717 O75717|O75717-2 WD repeat and HMG-box DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35214.35214.3 17.77 15.49 0.533 4 1 1 0 1288.9043 3783.7372 N340n S348s TMT10 322 (K) DYNDLFDGDDMSNAGDFLnDNAVEIPsFSK (G) DY(0.0)N(0.0)DLFDGDDMS(0.0)N(0.33)AGDFLN(0.33)DN(0.33)AVEIPS(0.99)FS(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S WDHD1 127448.5 2 3 554.1 273.24 HUMAN 1 1.1867 -26.0927 DNEAAAPSPSGFVHA-p Q13634-2;S548-p DNEAAAPSPSGFVHA 0.169045315399673 0.0109657352056547 0.478666666666667 0.661333333333333 15.3989700597924 27.4607990227271 0.478666666666667 0.661333333333333 0.028847155395059 0.00179440345891495 2.95361866792713 5.68722946312445 Q13634 CDH18 Q13634.2.S548.p_CDH18 Q13634-2_S548s_1_1_548_548 Q13634-2 Q13634-2 Isoform 2 of Cadherin-18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20521.20521.4 8.12 8.12 2.519 2 1 1 0 846.8915 3272.6015 S548s M558m M565m TMT10 541 (K) DNEAAAPsPSGFVHAREmGVCGPAmQK (P) DNEAAAPS(0.99)PS(0.0)GFVHAREM(1.0)GVCGPAM(1.0)QK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,m:Oxidized methionine CDH18 64131.9 1 1 7023.1 8.12 HUMAN 1 15.399 27.4608 DNEEEIESADQEEEA-p Q15147-5;S503-p DNEEEIESADQEEEA 0.574658438736738 0.175608983765529 -0.112666666666667 0.151 4.426616957286 9.93455456422772 -0.112666666666667 0.151 0.360859633971893 0.101518348390985 -0.997848788525524 1.96955195033566 Q15147 PLCB4 Q15147.5.S503.p_PLCB4 Q15147-5_S503s _1_1_503_503 Q15147-5 Q15147-4|Q15147-5|Q15147-2 Isoform 4 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25013.25013.4 24.82 24.82 5.456 4 1 1 0 1162.2583 4566.0336 S503s TMT10 479 (R) SMMEAGESASPANILEDDNEEEIEsADQEEEAHPEFK (F) S(0.0)MMEAGES(0.0)AS(0.0)PANILEDDNEEEIES(0.99)ADQEEEAHPEFK K:TMT10,s:Phosphorylated S PLCB4 136983.7 1 2 1968.1 104.91 HUMAN 1 -4.4266 9.9346 DNFVFGQSGAGNNWA-p P07437;S95-p DNFVFGQSGAGNNWA 0.769256878109637 0.784053902640269 -0.106333333333333 -0.0633333333333333 2.18221716388467 1.46382158552793 -0.106333333333333 -0.0633333333333333 0.605031914487454 0.713867879727155 -0.54878760090632 -0.38645063654415 P07437 TUBB P07437.S95.p_TUBB P07437_S95s _1_1_95_95 P07437 Q13885|Q9BVA1|P68371|P07437|P04350|Q5JP53 Tubulin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31883.31883.4 19.38 18.5 17.485 2 1 1 0 834.9158 3256.6692 S95s TMT10 78 (R) SGPFGQIFRPDNFVFGQsGAGNNWAK (G) S(0.0)GPFGQIFRPDNFVFGQS(0.99)GAGNNWAK K:TMT10,s:Phosphorylated S TUBB 50126.4 3 7 333.1 357.15 HUMAN 1 -2.1822 -1.4638 DNGKENKTPSSDAQD-p Q99598;T165-p DNGKENKTPSSDAQD 0.742225314827426 0.300291924033588 -0.0556666666666667 0.104333333333333 2.45790518519022 6.89621166398492 -0.0556666666666667 0.104333333333333 0.567818425977956 0.204351972275052 -0.607979397246689 1.44244049855066 Q99598 TSNAX Q99598.T165.p_TSNAX Q99598_T165t _1_1_165_165 Q99598 Q99598 Translin-associated protein X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16365.16365.5 15.67 15.67 1.224 5 1 1 0 713.3754 3482.8785 T165t TMT10 151 (K) QLIFTTEDNGKENKtPSSDAQDK (Q) QLIFT(0.0)T(0.0)EDNGKENKT(0.99)PS(0.0)S(0.0)DAQDK K:TMT10,t:Phosphorylated T TSNAX 33226 2 4 2150.1 95.73 HUMAN 1 -2.4579 6.8962 DNGLEDDSRDGQEDM-p Q14151;S109-p DNGLEDDSRDGQEDM 0.271634421514974 0.12500019706305 0.433333333333333 0.491 10.7272936720687 11.9110435505691 0.433333333333333 0.491 0.084580574908312 0.0644014498997276 2.10839918870999 2.31542085106099 Q14151 SAFB2 Q14151.S109.p_SAFB2 Q14151_S109s _1_1_109_109 Q14151 Q14151 Scaffold attachment factor B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13080.13080.3 12.63 12.63 8.858 2 1 1 0 888.0677 2582.2292 S109s TMT10 92 (K) GLKMEEEGTEDNGLEDDsR (D) GLKMEEEGT(0.0)EDNGLEDDS(0.99)R K:TMT10,s:Phosphorylated S SAFB2 107985.1 2 1 83.3 629.62 HUMAN 1 10.7273 11.911 DNGTEPHTSDEEVEQ-p O43295;T739-p DNGTEPHTSDEEVEQ 0.600746876542819 0.00404124447761282 -0.114 0.651666666666667 4.08721407551212 35.2594191775647 -0.114 0.651666666666667 0.3901922080094 0.000297891480079407 -0.933764356093155 8.19020679956238 O43295 SRGAP3 O43295.T739.p_SRGAP3 O43295_T739tS740s_2_2_739_740 O43295 O43295|O43295-2 SLIT-ROBO Rho GTPase-activating protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22163.22163.4 24.81 24.04 1.375 6 2 2 0 1394.0759 5413.3731 T739t S740s TMT10 708 (K) CMAGGEEYCDSPHSEPGAIDEVDHDNGTEPHtsDEEVEQIEAIAK (F) CMAGGEEY(0.0)CDS(0.0)PHS(0.0)EPGAIDEVDHDNGT(0.0)EPHT(0.99)S(0.99)DEEVEQIEAIAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S SRGAP3 125471.5 3 15 754.1 231.27 HUMAN 1 -4.0872 35.2594 DNIPEMPSPKKMHQG-p P26358;S714-p DNIPEMPSPKKMHQG 0.96915478726984 0.0124217122663708 -0.006 -0.379 0.266420377383977 26.5970081761843 -0.006 -0.379 0.940498186057173 0.00218926927662743 -0.0781751002116682 -5.45257787371339 P26358 DNMT1 P26358.S714.p_DNMT1 P26358_S714s _1_1_714_714 P26358 P26358-2|P26358-3 DNA (cytosine-5)-methyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19215.19215.5 25.91 22.26 99 1 1 1 0 821.1939 4021.9673 S714s TMT10 691 (R) CPNMAMKEADDDEEVDDNIPEMPsPKK (M) CPNMAMKEADDDEEVDDNIPEMPS(1.0)PKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DNMT1 185501.2 26 9 431.1 316.29 HUMAN 1 -0.2664 -26.597 DNKDKGSS_______-p Q9BSJ8-2;S1114-p DNKDKGSS_______ 0.140760843773736 0.0028998898692722 0.87 -1.58333333333333 17.425608721853 38.3361206888323 0.87 -1.58333333333333 0.0180900233658976 0.000146685751821129 3.3469379599561 -9.40758195959386 Q9BSJ8 ESYT1 Q9BSJ8.2.S1114.p_ESYT1 Q9BSJ8-2_S1114s_1_1_1114_1114 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23209.23568.3 12.51 12.51 1.209 3 1 1 0 776.3797 2246.173 N1108n S1114s TMT10 1102 (R) WYDLMDnKDKGSs (-) WY(0.0)DLMDN(1.0)KDKGS(0.0)S(0.99) K:TMT10,n:Deamidated,s:Phosphorylated S ESYT1 124514 5 13 400.1 328.2 HUMAN 1 17.4256 -38.3361 DNKFSDDSDDDFVQP-p O15164;S1028-p DNKFSDDSDDDFVQP 0.349266178256773 0.337077034599447 0.130666666666667 0.178333333333333 8.48762417179257 6.25737016100888 0.130666666666667 0.178333333333333 0.141656850843407 0.236735279699541 1.71966360967241 1.32995602711406 O15164 TRIM24 O15164.S1028.p_TRIM24 O15164_S1028s _1_1_1028_1028 O15164 O15164|O15164-2 Transcription intermediary factor 1-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16635.16635.5 13.13 13.13 3.867 3 1 1 0 837.6025 4104.0302 S1028s TMT10 1009 (K) RFPKPEFRNESEDNKFSDDsDDDFVQPR (K) RFPKPEFRNES(0.0)EDNKFS(0.0)DDS(0.99)DDDFVQPR K:TMT10,s:Phosphorylated S TRIM24 118769 1 10 598.1 263.51 HUMAN 1 8.4876 6.2574 DNKKMKKSLEEEQRA-p Q14155-5;S699-p DNKKMKKSLEEEQRA 0.2867979339798 0.0106206748384577 -0.206 0.967666666666667 10.236536095134 27.6855920230332 -0.206 0.967666666666667 0.0946992175099182 0.00170388703242975 -2.02283648347562 5.74951798498969 Q14155 ARHGEF7 Q14155.5.S699.p_ARHGEF7 Q14155-5_S699s _1_1_699_699 Q14155-5 Q14155-5|B1ALK7|Q14155-1 Isoform 5 of Rho guanine nucleotide exchange factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5079.5079.2 10.77 1.65 99 1 1 1 0 600.2786 1119.5843 S699s TMT10 699 (K) sLEEEQR (A) S(1.0)LEEEQR s:Phosphorylated S ARHGEF7 83311.3 1 14 434.1 313.68 HUMAN 1 -10.2365 27.6856 DNKTIELSDDDFLGE-p O75131;S90-p DNKTIELSDDDFLGE 0.219716131376416 0.90878567646156 -0.35 0.0123333333333333 12.6660626496886 0.581906483504565 -0.35 0.0123333333333333 0.054124479766494 0.87459975560172 -2.45106370516381 0.16542873937577 O75131 CPNE3 O75131.S90.p_CPNE3 O75131_S90s _1_1_90_90 O75131 O75131 Copine-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.34695.34695.3 23.55 23.55 3.469 5 1 1 0 1085.5109 3174.5587 S90s TMT10 86 (K) TIELsDDDFLGECECTLGQIVSSK (K) T(0.0)IELS(0.99)DDDFLGECECT(0.0)LGQIVS(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CPNE3 60985.3 1 3 1209.1 166.69 HUMAN 1 -12.6661 0.5819 DNLAVPESPGVGGGK-p O14686-3;S2263-p DNLAVPESPGVGGGK 0.870382146896021 0.151435219300912 -0.0253333333333333 -0.174666666666667 1.18034205558192 10.7800447831228 -0.0253333333333333 -0.174666666666667 0.762018990125344 0.0835594401792123 -0.31852301917149 -2.1166857405305 O14686 KMT2D O14686.3.S2263.p_KMT2D O14686-3_S2263s _1_1_2263_2263 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21595.21595.4 20.11 20.11 11.982 2 1 1 0 598.8055 2312.2321 S2263s TMT10 2252 (R) CPSLDNLAVPEsPGVGGGK (A) CPS(0.0)LDNLAVPES(0.99)PGVGGGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2D 600227.3 2 27 17.1 1042.08 HUMAN 1 -1.1803 -10.78 DNLTRRFSDLGFEVK-p P55212;S79-p DNLTRRFSDLGFEVK 0.352995852382669 0.191029324691242 -0.275666666666667 0.166333333333333 8.39863620193961 9.45424774798528 -0.275666666666667 0.166333333333333 0.144589374784862 0.113390122688051 -1.70425272274467 1.88631319116353 P55212 CASP6 P55212.S79.p_CASP6 P55212_S79s _1_1_79_79 P55212 P55212 Caspase-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22573.22573.3 9.47 9.47 99 1 1 1 0 579.3115 1655.9521 S79s TMT10 77 (R) RFsDLGFEVK (C) RFS(1.0)DLGFEVK K:TMT10,s:Phosphorylated S CASP6 33879.9 1 1 6791.1 9.47 HUMAN 1 -8.3986 9.4542 DNNLRPKSE______-p Q4KMQ2-2;S930-p DNNLRPKSE______ 0.019376665224519 0.0138631389643701 -0.773333333333333 -0.451 40.0377121604531 25.7967991254256 -0.774574498770942 -0.451 9.91354047243377e-05 0.00263220728922303 -10.1718748922697 -5.24163805140889 Q4KMQ2 ANO6 Q4KMQ2.2.S930.p_ANO6 Q4KMQ2-2_S930s _1_1_930_930 Q4KMQ2-2 Q4KMQ2-2|Q4KMQ2-3 Isoform 2 of Anoctamin-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17431.17431.3 12.5 12.5 99 1 1 1 0 718.7056 2074.1367 S930s TMT10 918 (R) MIEAVDNNLRPKsE (-) MIEAVDNNLRPKS(1.0)E K:TMT10,s:Phosphorylated S ANO6 109514.5 4 4 3323.1 53.95 HUMAN 1 -40.0377 -25.7968 DNNQERKSPGVKNQG-p P15822;S1897-p DNNQERKSPGVKNQG 0.275757791818365 0.0400313455017357 -0.159 -0.364666666666667 10.5819317816768 18.7399871770217 -0.159 -0.364666666666667 0.0874594660968532 0.01336599462984 -2.08301862976658 -3.61049347297072 P15822 HIVEP1 P15822.S1897.p_HIVEP1 P15822_S1897s _1_1_1897_1897 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5095.5095.4 9.39 4.73 2.542 2 1 1 0 600.814 2320.2646 S1897s TMT10 1888 (K) CTDNNQERKsPGVK (N) CT(0.0)DNNQERKS(0.99)PGVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HIVEP1 299483.8 4 28 82.1 631.69 HUMAN 1 -10.5819 -18.74 DNPHGNDSAKASRAR-p P12956;S180-p DNPHGNDSAKASRAR 0.485131901382855 0.387840359752957 0.102333333333333 0.122666666666667 5.78820667288134 5.46742793727135 0.102333333333333 0.122666666666667 0.263742022784912 0.283960025349943 1.24674094426177 1.18880926356186 P12956 XRCC6 P12956.S180.p_XRCC6 P12956_S180s _1_1_180_180 P12956 P12956|P12956-2|B1AHC9 X-ray repair cross-complementing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21550.21550.3 12.73 12.73 4.984 2 1 1 0 814.3889 2361.1909 S180s TMT10 166 (R) IMLFTNEDNPHGNDsAK (A) IMLFT(0.0)NEDNPHGNDS(0.99)AK K:TMT10,s:Phosphorylated S XRCC6 70127.1 3 8 815.1 220.5 HUMAN 1 5.7882 5.4674 DNPRRYDSDDDLPRL-p Q8N3F9;S357-p DNPRRYDSDDDLPRL 0.540142097460872 0.351508230654707 -0.0873333333333333 -0.101666666666667 4.93766622995745 6.01880287131442 -0.0873333333333333 -0.101666666666667 0.320799274178555 0.250103467456137 -1.09262262797456 -1.28760527616827 Q8N3F9 GPR137C Q8N3F9.S357.p_GPR137C Q8N3F9_S357s _1_1_357_357 Q8N3F9 Q8N3F9 Integral membrane protein GPR137C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7997.7997.2 12.28 12.28 6.387 2 1 1 0 780.8463 1480.723 S357s TMT10 354 (R) RYDsDDDLPR (L) RY(0.0)DS(0.99)DDDLPR s:Phosphorylated S GPR137C 47929.5 1 1 6337.1 12.28 HUMAN 1 -4.9377 -6.0188 DNQGGYGSVGRMGMG-p P31942;S298-p DNQGGYGSVGRMGMG 0.158312848211182 0.232117899844448 -0.248666666666667 0.126 16.043238851946 8.35532723908122 -0.248666666666667 0.126 0.0248700188709513 0.146038470591717 -3.07649700078749 1.69618820650723 P31942 HNRNPH3 P31942.S298.p_HNRNPH3 P31942_S298s _1_1_298_298 P31942 P31942|P31942-2|P31942-3|P31942-4 Heterogeneous nuclear ribonucleoprotein H3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8524.8524.2 18.07 18.07 7.28 2 1 1 0 861.3601 1641.7488 S298s TMT10 288 (R) DGMDNQGGYGsVGR (M) DGMDNQGGY(0.0)GS(0.99)VGR s:Phosphorylated S HNRNPH3 36982.9 3 4 1995.1 103.48 HUMAN 1 -16.0432 8.3553 DNQLTIKSPSKRELA-p Q99741;S106-p DNQLTIKSPSKRELA 0.0709370859652101 0.000952253650599092 -0.398666666666667 -1.37866666666667 24.8108648473906 54.6547137531384 -0.398666666666667 -1.37719033304088 0.00330303758301723 3.42395954465685e-06 -4.99603360054091 -19.181189930457 Q99741 CDC6 Q99741.S106.p_CDC6 Q99741_S106s _1_1_106_106 Q99741 Q99741 Cell division control protein 6 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18972.18972.4 11.24 11.24 1.466 3 1 1 0 629.1179 2433.4796 S106s TMT10 95 (R) RLVFDNQLTIKsPSK (R) RLVFDNQLT(0.0)IKS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S CDC6 63689.1 7 4 1629.1 125.37 HUMAN 1 -24.8109 -54.6547 DNQTLSHSLKMADQN-p Q9NZ43;S204-p DNQTLSHSLKMADQN 0.0611233751023293 0.00823499727805445 -0.450333333333333 -0.461 26.5038309902001 29.6566011178666 -0.450333333333333 -0.461 0.00223674719290229 0.00108228063606875 -5.43501408779999 -6.31845576374981 Q9NZ43 USE1 Q9NZ43.S204.p_USE1 Q9NZ43_S204s _1_1_204_204 Q9NZ43 Q9NZ43|G8JLK1 Vesicle transport protein USE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8353.8353.3 11.49 11.49 1.421 3 1 1 0 560.9621 1600.9059 S204s TMT10 197 (K) DNQTLSHsLK (M) DNQT(0.0)LS(0.0)HS(0.99)LK K:TMT10,s:Phosphorylated S USE1 29484.7 1 1 6472.1 11.49 HUMAN 1 -26.5038 -29.6566 DNRARESSDSEEEYK-p Q9BYW2;S459-p DNRARESSDSEEEYK 0.799321908925685 0.872888347980138 -0.054 0.0213333333333334 1.87300775495087 0.832539988564735 -0.054 0.0213333333333334 0.649679591641666 0.825554979241609 -0.480491346096493 0.231306448818033 Q9BYW2 SETD2 Q9BYW2.S459.p_SETD2 Q9BYW2_S458sS459sS461s_3_3_458_461 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9399.9399.5 8.39 8.39 7.035 4 3 3 0 497.8243 2245.1915 S458s S459s S461s TMT10 455 (R) AREssDsEEEYKK (T) ARES(0.99)S(0.99)DS(0.99)EEEY(0.0)KK K:TMT10,s:Phosphorylated S SETD2 290615.4 1 37 58.1 711.11 HUMAN 1 -1.873 0.8325 DNRRSWASPVYTEAD-p Q8WWI1-3;S345-p DNRRSWASPVYTEAD 0.866782968380142 0.252039395726046 0.029 -0.120333333333333 1.2094987761908 7.8812377775385 0.029 -0.120333333333333 0.756920246938484 0.162883173508251 0.325633753397021 -1.6140479706663 Q8WWI1 LMO7 Q8WWI1.3.S345.p_LMO7 Q8WWI1-3_S345s _1_1_345_345 Q8WWI1-3 Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22101.22101.3 16.31 16.31 3.244 6 1 1 0 694.9849 2002.9708 S345s TMT10 342 (R) SWAsPVYTEADGTFSR (L) S(0.0)WAS(0.99)PVY(0.0)T(0.0)EADGT(0.0)FS(0.0)R s:Phosphorylated S LMO7 154694.3 2 7 61.1 704.74 HUMAN 1 1.2095 -7.8812 DNSALGNSPYHRAPR-p Q6P1L8;S49-p DNSALGNSPYHRAPR 0.545054581641799 0.344014877664781 0.0863333333333333 -0.203666666666667 4.86470246329976 6.1391397303581 0.0863333333333333 -0.203666666666667 0.3262344000639 0.243268583847848 1.07920480608524 -1.30899431468842 Q6P1L8 MRPL14 Q6P1L8.S49.p_MRPL14 Q6P1L8_S49s _1_1_49_49 Q6P1L8 Q6P1L8 39S ribosomal protein L14, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9691.9691.3 19.28 19.28 5.672 3 1 1 0 613.2987 1757.9132 S49s TMT10 40 (R) VVDNSALGNsPYHR (A) VVDNS(0.0)ALGNS(0.99)PY(0.0)HR s:Phosphorylated S MRPL14 16175.6 1 1 4784.1 26.68 HUMAN 1 4.8647 -6.1391 DNSINLGSPEQMPSE-p F5H0C4;S238-p DNSINLGSPEQMPSE 0.322409753465923 0.777585961378643 0.160666666666667 -0.0376666666666667 9.20230160642102 1.5119225459461 0.160666666666667 -0.0376666666666666 0.120162744599691 0.706004948994875 1.84338804622078 -0.397736945276192 F5H0C4 NotFound F5H0C4.S238.p_NotFound F5H0C4_S238s _1_1_238_238 F5H0C4 F5H0C4 Proteasomal ATPase-associated factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26146.26146.5 29.55 29.25 2.296 7 1 1 0 1012.0909 4976.444 S238s TMT10 209 (R) SACLGVLADCGSSINGVAVGAADNSINLGsPEQMPSEREVGTEAK (M) S(0.0)ACLGVLADCGS(0.0)S(0.0)INGVAVGAADNS(0.0)INLGS(0.99)PEQMPS(0.0)EREVGT(0.0)EAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PAAF1 43749 1 2 3607.1 47.12 HUMAN 1 9.2023 -1.5119 DNSKKNESPFWKLYE-p P46013;S235-p DNSKKNESPFWKLYE 0.659329442098231 0.00562708483008173 0.06 -0.602666666666667 3.39439329038285 32.6032120330398 0.06 -0.602666666666667 0.45767866815424 0.000549134584823394 0.799440247176653 -7.25212906790509 P46013 MKI67 P46013.S235.p_MKI67 P46013_S235s _1_1_235_235 P46013 P46013 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16320.16320.3 8.36 8.36 99 1 1 1 0 601.6648 1723.0146 S235s TMT10 232 (K) KNEsPFWK (L) KNES(1.0)PFWK K:TMT10,s:Phosphorylated S MKI67 360912.4 2 3 5.1 1918.46 HUMAN 1 3.3944 -32.6032 DNSMSVPSPTSATKT-p P51003;S537-p DNSMSVPSPTSATKT 0.860126167461392 0.0192918570550088 0.0253333333333333 0.321666666666667 1.27809612785248 23.5586843132177 0.0253333333333333 0.321666666666667 0.745058523137642 0.00440688348973919 0.342251280605169 4.68234604256112 P51003 PAPOLA P51003.S537.p_PAPOLA P51003_S537s _1_1_537_537 P51003 P51003|G3XAH6 Poly(A) polymerase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29286.29286.3 21.58 21.58 3.271 11 1 1 0 1174.8935 3442.697 S537s TMT10 515 (K) LTALNDSSLDLSMDSDNSMSVPsPTSATK (T) LT(0.0)ALNDS(0.0)S(0.0)LDLS(0.0)MDS(0.0)DNS(0.0)MS(0.0)VPS(0.99)PT(0.0)S(0.0)AT(0.0)K K:TMT10,s:Phosphorylated S PAPOLA 83297.5 32 4 1658.1 123.25 HUMAN 1 1.2781 23.5587 DNSTAQDTEELEKEI-p Q86UE4;T462-p DNSTAQDTEELEKEI 0.242631729236365 0.348824578323559 -0.234666666666667 -0.106666666666667 11.7656167490749 6.06404236180338 -0.234666666666667 -0.106666666666667 0.0665944942594483 0.247511717525352 -2.29082924259161 -1.29565286545112 Q86UE4 MTDH Q86UE4.T462.p_MTDH Q86UE4_T462t _1_1_462_462 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8009.8009.4 19.94 19.94 11.704 3 1 1 0 762.3995 2966.6088 T462t TMT10 450 (K) KKQGEDNSTAQDtEELEK (E) KKQGEDNS(0.0)T(0.0)AQDT(0.99)EELEK K:TMT10,t:Phosphorylated T MTDH 63892.9 2 21 77.1 644.48 HUMAN 1 -11.7656 -6.064 DNSWVFPSPPKSSET-p Q9H6S1;S353-p DNSWVFPSPPKSSET 0.138546141076681 0.00409705444837241 -0.331333333333333 -0.643666666666667 17.5803961060617 35.1565362124017 -0.331333333333333 -0.643666666666667 0.01745662929345 0.000305032685843699 -3.37783781631325 -8.15201897797024 Q9H6S1 AZI2 Q9H6S1.S353.p_AZI2 Q9H6S1_S353s _1_1_353_353 Q9H6S1 Q9H6S1 5-azacytidine-induced protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25791.25791.4 24.28 24.28 3.066 7 1 1 0 881.1944 3441.7781 S353s TMT10 342 (R) NSLEDNSWVFPsPPKSSETAFGETK (T) NS(0.0)LEDNS(0.0)WVFPS(0.99)PPKS(0.0)S(0.0)ET(0.0)AFGET(0.0)K K:TMT10,s:Phosphorylated S AZI2 45447.5 4 2 3176.1 58.64 HUMAN 1 -17.5804 -35.1565 DNTFFRESPVGRKDS-p F8W0Q9;S151-p DNTFFRESPVGRKDS 0.420320976430283 0.240113105375878 0.107333333333333 0.150333333333333 6.94847873882526 8.16367046647683 0.107333333333333 0.150333333333333 0.201907348761293 0.152627557181371 1.4519916413065 1.66300319476821 F8W0Q9 NotFound F8W0Q9.S151.p_NotFound F8W0Q9_S151s _1_1_151_151 F8W0Q9 Q8NEY8|Q8NEY8-3|F8W0Q9|Q8NEY8-2|Q8NEY8-8|F8W6A0|Q8NEY8-9|B7Z8L1|Q8NEY8-6|F8WF16 Periphilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13012.13012.3 15.14 9.3 5.95 2 1 1 0 578.6121 1653.8546 S151s TMT10 144 (R) DNTFFREsPVGR (K) DNT(0.0)FFRES(0.99)PVGR s:Phosphorylated S PPHLN1 44796.3 10 7 663.1 251.09 HUMAN 1 6.9485 8.1637 DNVFATPSPIIQQLE-p Q8IX90;S267-p DNVFATPSPIIQQLE 0.198300279868763 0.00320981770772267 -0.352 -0.625333333333333 13.6868888015063 37.3480219159217 -0.352 -0.625333333333333 0.0427869293359766 0.000184161061013102 -2.63560848457355 -9.00017844245336 Q8IX90 SKA3 Q8IX90.S267.p_SKA3 Q8IX90_T265tS267s_2_2_265_267 Q8IX90 Q8IX90|Q8IX90-3 Spindle and kinetochore-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.34264.34264.3 12.11 12.11 99 2 2 2 0 882.454 2485.4066 T265t S267s TMT10 258 (R) LNDNVFAtPsPIIQQLEK (S) LNDNVFAT(1.0)PS(1.0)PIIQQLEK K:TMT10,t:Phosphorylated T,s:Phosphorylated S SKA3 46872 2 12 966.1 193.88 HUMAN 1 -13.6869 -37.348 DNVGEARSPQDRSPI-p O95259;S899-p DNVGEARSPQDRSPI 0.505689515077119 0.961050637830868 -0.129 -0.00533333333333332 5.46604368880744 0.247839393579236 -0.129 -0.00533333333333332 0.284050547770723 0.944530661545547 -1.18881903836725 -0.0728589200971201 O95259 KCNH1 O95259.S899.p_KCNH1 O95259_S899s _1_1_899_899 O95259 O95259|O95259-2|A0A1W2PNI2|A0A1X7SBS6|A0A1W2PPA2|A0A0S1TJ81 Potassium voltage-gated channel subfamily H member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18877.18877.5 15.16 15.16 3.931 3 1 1 0 661.5555 3223.7799 S899s TMT10 887 (K) SDLRLDNVGEARsPQDRSPILAEVK (H) S(0.0)DLRLDNVGEARS(0.99)PQDRS(0.0)PILAEVK K:TMT10,s:Phosphorylated S KCNH1 112504.8 2 2 2720.1 72.93 HUMAN 1 -5.466 -0.2478 DNVHVALSLVEYKPE-p O95347;S608-p DNVHVALSLVEYKPE 0.910128808420206 0.902452891488464 0.0186666666666667 -0.0123333333333333 0.801562718871545 0.620941694873292 0.0186666666666667 -0.0123333333333333 0.831464531953069 0.866773909969714 0.223334028714505 -0.175875424744328 O95347 SMC2 O95347.S608.p_SMC2 O95347_S608s _1_1_608_608 O95347 O95347|O95347-2 Structural maintenance of chromosomes protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29384.29384.4 22.78 18.87 11.411 2 1 1 0 907.7559 3548.0455 S608s TMT10 593 (R) VAQNLVGPDNVHVALsLVEYKPELQK (A) VAQNLVGPDNVHVALS(0.99)LVEY(0.0)KPELQK K:TMT10,s:Phosphorylated S SMC2 136167.1 2 3 2559.1 78.57 HUMAN 1 0.8016 -0.6209 DNVTGLLSQSDSKSS-p P35579;S1290-p DNVTGLLSQSDSKSS 0.916520566451657 0.301778270044502 -0.0153333333333333 0.109333333333333 0.738822118534309 6.86813383790543 -0.0153333333333333 0.109333333333333 0.843563515701739 0.205677420138949 -0.207017412692703 1.43752073963606 P35579 MYH9 P35579.S1290.p_MYH9 P35579_S1290s _1_1_1290_1290 P35579 P35579 Myosin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.31063.31063.3 20.61 20.61 2.357 4 1 1 0 828.7709 2404.3335 S1290s TMT10 1278 (K) LQVELDNVTGLLsQSDSK (S) LQVELDNVT(0.0)GLLS(0.99)QS(0.0)DS(0.0)K K:TMT10,s:Phosphorylated S MYH9 227783.5 1 29 296.1 379.15 HUMAN 1 -0.7388 6.8681 DNWKLGDSPIQKHKQ-p Q13490;S98-p DNWKLGDSPIQKHKQ 0.776687645016293 0.0300950097120904 0.04 0.298666666666667 2.10648538544569 20.5879446905777 0.04 0.298666666666667 0.615674918340562 0.00873384602030641 0.532256951450962 4.00239469288593 Q13490 BIRC2 Q13490.S98.p_BIRC2 Q13490_S98s _1_1_98_98 Q13490 Q13490|E9PMH5|Q13490-2|A0A087X2B2 Baculoviral IAP repeat-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14071.14071.2 8.46 5.39 99 1 1 1 0 698.3857 1315.7986 S98s TMT10 95 (K) LGDsPIQK (H) LGDS(1.0)PIQK K:TMT10,s:Phosphorylated S BIRC2 71153.6 1 1 3580.1 47.77 HUMAN 1 2.1065 20.5879 DNYVPEVSALDQEII-p P08708;S89-p DNYVPEVSALDQEII 0.585550294934873 0.901272848642271 -0.0876666666666667 -0.0173333333333333 4.27485293687308 0.629805204560783 -0.0876666666666667 -0.0173333333333333 0.373692779353202 0.865006716317783 -0.969316741028657 -0.17823752776929 P08708 RPS17 P08708.S89.p_RPS17 P08708_S89s _1_1_89_89 P08708 A0A075B716|H0YN88|P08708 40S ribosomal protein S17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33235.33235.4 15.22 15.22 7.292 3 1 1 0 757.6248 2947.5188 S89s TMT10 82 (R) DNYVPEVsALDQEIIEVDPDTK (E) DNY(0.0)VPEVS(0.99)ALDQEIIEVDPDT(0.0)K K:TMT10,s:Phosphorylated S RPS17 15606.9 2 1 2548.1 78.98 HUMAN 1 -4.2749 -0.6298 DPAAASISDGDCDAR-p Q8IW50-6;S28-p DPAAASISDGDCDAR 0.937872296035141 0.491122192490106 0.013 0.0776666666666667 0.542880252363138 4.12716832898487 0.013 0.0776666666666667 0.882494433681867 0.386618976784004 0.154926170018845 0.941198048747341 Q8IW50 FAM219A Q8IW50.6.S28.p_FAM219A Q8IW50-6_S28s _1_1_28_28 Q8IW50-6 Q8IW50-6|Q8IW50-5 Isoform 6 of Protein FAM219A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27172.27172.5 18.53 18.53 1.169 4 1 1 0 926.4206 4548.0625 S28s Acetyl 1 (-) MMEEIDRFQVPTAHSEMQPLDPAAASIsDGDCDAREEK (Q) MMEEIDRFQVPT(0.0)AHS(0.0)EMQPLDPAAAS(0.0)IS(0.99)DGDCDAREEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM219A 18841.5 1 1 1822.1 112.63 HUMAN 1 0.5429 4.1272 DPAEYNISPETRRAQ-p O95168;S26-p DPAEYNISPETRRAQ 0.92361123063537 0.448824313596052 0.0176666666666667 0.0746666666666667 0.679511765188558 4.63723500257921 0.0176666666666667 0.0746666666666667 0.85516284507605 0.343776748584433 0.191435289800022 1.03694244031374 O95168 NDUFB4 O95168.S26.p_NDUFB4 O95168_S26s _1_1_26_26 O95168 O95168|O95168-2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20729.20729.3 15.73 10.92 2.214 5 1 1 0 837.7487 2431.2666 S26s TMT10 13 (R) TLPETLDPAEYNIsPETRR (A) T(0.0)LPET(0.0)LDPAEY(0.0)NIS(0.99)PET(0.0)RR s:Phosphorylated S NDUFB4 15265.4 2 1 4904.1 25.23 HUMAN 1 0.6795 4.6372 DPAKAPNTPDILEIE-p P00966;T219-p DPAKAPNTPDILEIE 0.384388363979008 0.0414134903015843 -0.156 0.258333333333333 7.68874017109404 18.5373204790934 -0.156 0.258333333333333 0.170265235292799 0.0140045110988672 -1.58111419978792 3.56880444987092 P00966 ASS1 P00966.T219.p_ASS1 P00966_T219t _1_1_219_219 P00966 P00966 Argininosuccinate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25904.25904.4 21.2 21.2 8.087 2 1 1 0 724.3931 2814.5856 T219t TMT10 210 (K) TQDPAKAPNtPDILEIEFK (K) T(0.0)QDPAKAPNT(0.99)PDILEIEFK K:TMT10,t:Phosphorylated T ASS1 46814.8 6 2 2503.1 80.83 HUMAN 1 -7.6887 18.5373 DPAMFNISPGAVQF_-p Q8IVD9;S355-p DPAMFNISPGAVQF_ 0.480199545319759 0.0167144211287452 -0.099 -0.531666666666667 5.86562153550703 24.5315066015654 -0.099 -0.531666666666667 0.259082361210719 0.00352248652028656 -1.26058796409417 -4.92010060924791 Q8IVD9 NUDCD3 Q8IVD9.S355.p_NUDCD3 Q8IVD9_S355s _1_1_355_355 Q8IVD9 Q8IVD9 NudC domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.37544.37544.3 14.98 14.98 99 1 1 1 0 650.6408 1869.9407 S355s TMT10 347 (R) FDPAMFNIsPGAVQF (-) FDPAMFNIS(1.0)PGAVQF s:Phosphorylated S NUDCD3 40878.4 4 2 4349.1 33.04 HUMAN 1 -5.8656 -24.5315 DPAPAHPSPHASPMN-p Q9BUR4;S26-p DPAPAHPSPHASPMN 0.16550315241392 0.689994662324707 0.275333333333333 0.042 15.6275578215497 2.20830337083193 0.275333333333333 0.042 0.0273680728900182 0.60140863988217 2.99699974451757 0.5543867344149 Q9BUR4 WRAP53 Q9BUR4.S26.p_WRAP53 Q9BUR4_S26s _1_1_26_26 Q9BUR4 Q9BUR4|E9PMG4 Telomerase Cajal body protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15138.15138.4 20.24 20.24 2.188 5 1 1 0 1001.9671 3924.8719 S26s TMT10 3 (K) TLETQPLAPDCCPSDQDPAPAHPsPHASPMNK (N) T(0.0)LET(0.0)QPLAPDCCPS(0.0)DQDPAPAHPS(0.99)PHAS(0.0)PMNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WRAP53 60164.1 2 1 1145.1 172.91 HUMAN 1 15.6276 2.2083 DPAPPPGSPPQALAF-p O14841;S1265-p DPAPPPGSPPQALAF 0.433624473250427 0.0284804932683098 0.227 0.304333333333333 6.68676943972911 20.9342388567572 0.227 0.304333333333333 0.214448521329116 0.00806447526728451 1.40606458349746 4.07833298505006 O14841 OPLAH O14841.S1265.p_OPLAH O14841_S1265s _1_1_1265_1265 O14841 O14841 5-oxoprolinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28884.28884.4 25.93 25.93 6.733 10 1 1 0 1388.6416 5471.5793 S1265s TMT10 1233 (K) TSVTVYPGDVFCLHTPGGGGYGDPEDPAPPPGsPPQALAFPEHGSVYEYR (R) T(0.0)S(0.0)VT(0.0)VY(0.0)PGDVFCLHT(0.0)PGGGGY(0.0)GDPEDPAPPPGS(0.99)PPQALAFPEHGS(0.0)VY(0.0)EY(0.0)R C:Carbamidomethylation,s:Phosphorylated S OPLAH 138824 1 3 1942.1 106.03 HUMAN 1 6.6868 20.9342 DPATPRVSPAHSPPE-p H0YL70;S273-p DPATPRVSPAHSPPE 0.749370336137999 0.0890827504537239 0.0533333333333333 0.208333333333333 2.38428986055832 13.8986536017303 0.0533333333333333 0.208333333333333 0.577525299417938 0.0407506593277845 0.592318804629159 2.67274065538282 H0YL70 TLE3 H0YL70.S273.p_TLE3 H0YL70_S273sS277s_2_2_273_277 H0YL70 H0YL70|H0YKN8|H0YKT5|Q04726-7|Q04726-2|H0YNT2|F5H7D6|H0YLW9|H0YKH0|Q04726-4|A0A0D9SES8|Q04726-5|Q04726-6|Q04726-3 Transducin-like enhancer protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12789.12789.3 10.97 10.97 99 2 2 2 0 689.3286 1906.0434 S273s S277s TMT10 272 (R) VsPAHsPPENGLDK (A) VS(1.0)PAHS(1.0)PPENGLDK K:TMT10,s:Phosphorylated S TLE3 85275.2 3 14 447.1 309.48 HUMAN 1 2.3843 13.8987 DPAVADGSESETEDS-p O60447-2;S787-p DPAVADGSESETEDS 0.640615783875993 0.171092570935137 0.0676666666666667 0.143333333333333 3.61241358102754 10.0806627094566 0.0676666666666667 0.143333333333333 0.435269906262922 0.0981598145121231 0.842277009457084 1.994913815874 O60447 EVI5 O60447.2.S787.p_EVI5 O60447-2_S787sS789s_2_2_787_789 O60447-2 O60447-2 Isoform 2 of Ecotropic viral integration site 5 protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24624.24624.3 22.92 22.92 1.132 8 2 2 0 1020.0938 2898.336 S787s S789s TMT10 774 (K) SGSMSLDPAVADGsEsETEDSVLETR (E) S(0.0)GS(0.0)MS(0.0)LDPAVADGS(0.99)ES(0.99)ET(0.0)EDS(0.0)VLET(0.0)R s:Phosphorylated S EVI5 94702 2 3 2708.1 73.26 HUMAN 1 3.6124 10.0807 DPCSLIPTPDKEDDD-p P24864;T77-p DPCSLIPTPDKEDDD 0.0739261060777586 0.00171039759294762 -0.398 -1.13466666666667 24.2926605695384 43.9176376506319 -0.398 -1.13466666666667 0.00372163641968727 4.05729172241934e-05 -4.86683147340579 -12.0420170280324 P24864 CCNE1 P24864.T77.p_CCNE1 P24864_T77t _1_1_77_77 P24864 P24864|P24864-3|P24864-2|C9J2U0 G1/S-specific cyclin-E1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20335.20335.5 22.69 22.69 3.491 6 1 1 0 1109.9125 5465.5498 T77t TMT10 55 (R) DQCGSQPWDNNAVCADPCSLIPtPDKEDDDRVYPNSTCKPR (I) DQCGS(0.0)QPWDNNAVCADPCS(0.0)LIPT(0.99)PDKEDDDRVY(0.0)PNS(0.0)T(0.0)CKPR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CCNE1 47646.9 1 1 1915.1 107.57 HUMAN 1 -24.2927 -43.9176 DPDDPSKSPVGSPLG-p Q92610;S404-p DPDDPSKSPVGSPLG 0.46456903942077 0.296000571084545 0.115666666666667 0.121666666666667 6.14376424229142 6.98028903378009 0.115666666666667 0.121666666666667 0.243009681245921 0.200433862920497 1.31013380724241 1.45716102617976 Q92610 ZNF592 Q92610.S404.p_ZNF592 Q92610_S404s_1_1_404_404 Q92610 Q92610|H0YM74 Zinc finger protein 592 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27936.27936.5 8.35 8.35 1.204 8 1 1 0 1176.3678 5780.8278 S404s M421m N438n TMT10 394 (R) ILPDPDDPSKsPVGSPLGSAIAEAPSEmPGDEVPVEEHFPEAGTnSGSPQGAR (K) ILPDPDDPS(0.0)KS(0.99)PVGS(0.0)PLGS(0.0)AIAEAPS(0.0)EM(1.0)PGDEVPVEEHFPEAGT(0.0)N(1.0)S(0.0)GS(0.0)PQGAR K:TMT10,s:Phosphorylated S,m:Oxidized methionine,n:Deamidated ZNF592 140207.3 3 9 164.1 494.76 HUMAN 1 6.1438 6.9803 DPDKNPASSKRRLKT-p P46013;S1628-p DPDKNPASSKRRLKT 0.60412890175299 0.0218530636857154 0.0923333333333333 -0.533333333333333 4.04092721627162 22.6960197312943 0.0923333333333334 -0.533333333333333 0.394373094653 0.00537524206648316 0.924944831853296 -4.47800243514209 P46013 MKI67 P46013.S1628.p_MKI67 P46013_S1628s _1_1_1628_1628 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7182.7182.3 9.87 9.87 1.108 4 1 1 0 742.3823 2145.1755 S1628s TMT10 1617 (K) SSQPDPDKNPAsSK (R) S(0.0)S(0.0)QPDPDKNPAS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S MKI67 360912.4 2 51 5.1 1918.46 HUMAN 1 4.0409 -22.696 DPDPEPPSPDSPTET-p Q9BUA3;S248-p DPDPEPPSPDSPTET 0.137325721125408 0.0836513181261303 0.261333333333333 0.194 17.6615897457108 14.2649100120346 0.261333333333333 0.194 0.0171333002400596 0.037454930780267 3.39409851390917 2.74000589653891 Q9BUA3 C11orf84 Q9BUA3.S248.p_C11orf84 Q9BUA3_S248s _1_1_248_248 Q9BUA3 Q9BUA3 SPIN1-docking protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22462.22676.3 21.49 20.2 2.278 4 1 1 0 986.794 2878.3944 S248s TMT10 239 (K) NLDPDPEPPsPDSPTETFAAPAEVR (H) NLDPDPEPPS(0.99)PDS(0.0)PT(0.0)ET(0.0)FAAPAEVR s:Phosphorylated S C11orf84 41321.3 2 8 884.1 206.69 HUMAN 1 17.6616 14.2649 DPDPLLASWHGGTGT-p C9J069;S426-p DPDPLLASWHGGTGT 0.575606222973366 0.685560164300514 0.091 -0.0453333333333333 4.41141367769905 2.24419177165186 0.091 -0.0453333333333334 0.362125103409384 0.596459311451436 0.994999123666502 -0.562157474366627 C9J069 C9orf172 C9J069.S426.p_C9orf172 C9J069_S426s _1_1_426_426 C9J069 C9J069 Uncharacterized protein C9orf172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25622.25622.3 18.36 18.36 3.523 6 1 1 0 1031.1863 3011.5788 S426s TMT10 411 (R) TLQVVPPSDPDPLLAsWHGGTGTSPPR (L) T(0.0)LQVVPPS(0.0)DPDPLLAS(0.99)WHGGT(0.0)GT(0.0)S(0.0)PPR s:Phosphorylated S C9orf172 107960.6 4 6 430.1 316.49 HUMAN 1 4.4114 -2.2442 DPDSDDVSEVDARHI-p A0A0A0MT49;S763-p DPDSDDVSEVDARHI 0.459299895698651 0.204232238245124 -0.128666666666667 0.126666666666667 6.23056834752491 9.07569353559227 -0.128666666666667 0.126666666666667 0.238200772310394 0.12371736068484 -1.32553531749994 1.82080571682857 A0A0A0MT49 NotFound A0A0A0MT49.S763.p_NotFound A0A0A0MT49_S763s _1_1_763_763 A0A0A0MT49 A0A0A0MT49|Q9HBD4|P51532|P51532-4|P51532-3|P51532-2 Transcription activator BRG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13580.13580.3 15.4 11.17 2.121 2 1 1 0 766.0423 2216.1447 S763s TMT10 753 (K) KIPDPDSDDVsEVDAR (H) KIPDPDS(0.0)DDVS(0.99)EVDAR K:TMT10,s:Phosphorylated S SMARCA4 189484.7 2 6 392.1 331.85 HUMAN 1 -6.2306 9.0757 DPEAMEESPRKKKKK-p Q9P275-2;S952-p DPEAMEESPRKKKKK 0.967758977154349 0.00387979257248964 -0.00966666666666668 -0.665 0.277972800132917 35.6080261861067 -0.00966666666666668 -0.665 0.937999744293286 0.000274914332033829 -0.0814660575859684 -8.3207644125895 Q9P275 USP36 Q9P275.2.S952.p_USP36 Q9P275-2_S952s _1_1_952_952 Q9P275-2 Q9P275-2|A0A075B784 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9081.9081.3 18.72 14.5 5.996 3 1 1 0 919.0685 2675.2264 S952s TMT10 936 (R) HSCSPMGDGDPEAMEEsPRK (K) HS(0.0)CS(0.0)PMGDGDPEAMEES(0.99)PRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S USP36 124218 8 18 241.1 413.35 HUMAN 1 -0.278 -35.608 DPEASKASPLPFEPW-p Q9C073;S428-p DPEASKASPLPFEPW 0.767296234797179 0.138096843742976 -0.0496666666666667 0.159333333333333 2.20357130415213 11.3286722503693 -0.0496666666666667 0.159333333333333 0.60206429103943 0.0736432209298139 -0.553426866331586 2.21276110031236 Q9C073 FAM117A Q9C073.S428.p_FAM117A Q9C073_S428s _1_1_428_428 Q9C073 Q9C073 Protein FAM117A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24959.24959.2 8.43 8.43 99 1 1 1 0 818.9138 1556.8423 S428s TMT10 427 (K) AsPLPFEPWQR (T) AS(1.0)PLPFEPWQR s:Phosphorylated S FAM117A 49059.4 1 10 640.1 255.25 HUMAN 1 -2.2036 11.3287 DPEAVPESDEEPPPG-p Q8WYB5;S1502-p DPEAVPESDEEPPPG 0.240968535804429 0.116743798088543 0.348 0.473 11.8136490750179 12.3021430974932 0.348 0.473 0.0658620269803071 0.0588553152459365 2.29932412052511 2.38481850615517 Q8WYB5 KAT6B Q8WYB5.S1502.p_KAT6B Q8WYB5_S1502s _1_1_1502_1502 Q8WYB5 Q8WYB5|Q8WYB5-2|Q8WYB5-3 Histone acetyltransferase KAT6B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14189.14189.4 23.28 18.93 99 1 1 1 0 947.2114 3705.8699 S1502s TMT10 1491 (K) ELAGDPEAVPEsDEEPPPGEQAQKQDQK (N) ELAGDPEAVPES(1.0)DEEPPPGEQAQKQDQK K:TMT10,s:Phosphorylated S KAT6B 234283.8 3 6 903.2 203.52 HUMAN 1 11.8136 12.3021 DPEDRIPSPLGYAAI-p Q9Y3A4;S19-p DPEDRIPSPLGYAAI 0.559676483538706 0.706013143400195 -0.0803333333333333 -0.0423333333333333 4.65210660717807 2.07619873816082 -0.0803333333333333 -0.0423333333333333 0.342601562472449 0.61998349240033 -1.03990082716686 -0.525549559476628 Q9Y3A4 RRP7A Q9Y3A4.S19.p_RRP7A Q9Y3A4_S19s _1_1_19_19 Q9Y3A4 Q9Y3A4 Ribosomal RNA-processing protein 7 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26401.26401.3 11.76 7.55 2.691 2 1 1 0 754.3996 2181.2117 S19s Hydrogen 12 (R) DPEDRIPsPLGYAAIPIK (F) DPEDRIPS(0.99)PLGY(0.0)AAIPIK K:TMT10-Lys-Only,s:Phosphorylated S RRP7A 32504.6 3 1 3825.1 42.42 HUMAN 1 -4.6521 -2.0762 DPEEEDDSFNNYEVQ-p Q9Y6J0;S433-p DPEEEDDSFNNYEVQ 0.283699532982309 0.712278201326522 0.165333333333333 0.041 10.3355984059399 2.02704059378648 0.165333333333333 0.041 0.0925635834767927 0.627041002710599 2.04008047847074 0.514722020809313 Q9Y6J0 CABIN1 Q9Y6J0.S433.p_CABIN1 Q9Y6J0_S433s _1_1_433_433 Q9Y6J0 Q9Y6J0|A0A087WWW8 Calcineurin-binding protein cabin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25231.25231.4 18.57 12.87 4.388 5 1 1 0 1117.0461 4385.2028 S433s TMT10 424 (R) KLDPEEEDDsFNNYEVQSEAKLESFPSIGPQR (L) KLDPEEEDDS(0.99)FNNY(0.0)EVQS(0.0)EAKLES(0.0)FPS(0.0)IGPQR K:TMT10,s:Phosphorylated S CABIN1 248858 4 4 763.1 229.21 HUMAN 1 10.3356 2.027 DPEEESWSPSLTNLE-p Q9HC52;S352-p DPEEESWSPSLTNLE 0.456417468206896 0.688836810789887 0.100333333333333 0.0453333333333334 6.27760875525525 2.21767130230445 0.100333333333333 0.0453333333333334 0.235634634156248 0.600112771945378 1.33387032710493 0.556417681754831 Q9HC52 CBX8 Q9HC52.S352.p_CBX8 Q9HC52_S352s _1_1_352_352 Q9HC52 Q9HC52 Chromobox protein homolog 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30123.30123.3 19.82 19.82 1.18 4 1 1 0 894.7824 2602.3652 S352s TMT10 342 (R) ILGDPEEESWsPSLTNLEK (V) ILGDPEEES(0.0)WS(0.99)PS(0.0)LT(0.0)NLEK K:TMT10,s:Phosphorylated S CBX8 43509.1 3 7 1574.1 130.51 HUMAN 1 6.2776 2.2177 DPEFPRASPRALGLT-p Q5T5Y3-3;S574-p DPEFPRASPRALGLT 0.908351461676759 0.988079240311777 0.0186666666666667 0.00166666666666665 0.821442963620089 0.0794597475342156 0.0186666666666667 0.00166666666666665 0.827667121771255 0.981870077829481 0.228469381618077 0.0237913687931274 Q5T5Y3 CAMSAP1 Q5T5Y3.3.S574.p_CAMSAP1 Q5T5Y3-3_S574s _1_1_574_574 Q5T5Y3-3 Q5T5Y3-3|Q5T5Y3-2 Isoform 3 of Calmodulin-regulated spectrin-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15074.15074.3 14.21 8.92 99 1 1 1 0 763.7135 2209.1563 S574s TMT10 559 (R) ADVVPQQADPEFPRAsPR (A) ADVVPQQADPEFPRAS(1.0)PR s:Phosphorylated S CAMSAP1 180710.7 5 6 220.1 428.42 HUMAN 1 0.8214 0.0795 DPEKNRLSEEFLTAH-p Q15813-2;S459-p DPEKNRLSEEFLTAH 0.504670395998139 0.0291546218573691 -0.116 -0.451333333333333 5.48513698457073 20.7825051497483 -0.116 -0.451333333333333 0.282804490783547 0.0083512115462263 -1.19226601432307 -4.04495788584491 Q15813 TBCE Q15813.2.S459.p_TBCE Q15813-2_S459s _1_1_459_459 Q15813-2 Q15813-2 Isoform 2 of Tubulin-specific chaperone E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11923.11923.3 11.87 11.87 4.953 2 1 1 0 626.9858 1798.9761 S459s TMT10 456 (K) NRLsEEFLTAHPR (Y) NRLS(0.99)EEFLT(0.0)AHPR s:Phosphorylated S TBCE 65706.2 1 3 4388.1 32.16 HUMAN 1 -5.4851 -20.7825 DPELEKESPGLKNSP-p Q14966;S1100-p DPELEKESPGLKNSP 0.474960924415695 0.0217763143271201 -0.131666666666667 0.417666666666667 5.95364116460506 22.718257061101 -0.131666666666667 0.417666666666667 0.253884322363682 0.00534778937302157 -1.2763007271671 4.48319597247601 Q14966 ZNF638 Q14966.S1100.p_ZNF638 Q14966_S1100s _1_1_1100_1100 Q14966 Q14966|Q14966-3|Q14966-5 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23705.23705.4 21.4 18.28 99 1 1 1 0 821.4464 3202.7814 S1100s TMT10 1083 (K) IDLPEVQIEHDPELEKEsPGLK (N) IDLPEVQIEHDPELEKES(1.0)PGLK K:TMT10,s:Phosphorylated S ZNF638 222047.2 4 16 165.1 494.68 HUMAN 1 -5.9536 22.7183 DPELEPASGGEQEPR-p Q8IYJ3;S199-p DPELEPASGGEQEPR 0.361508209816554 0.0416640348455564 0.181666666666667 0.397333333333333 8.21370817775345 18.499233513148 0.181666666666667 0.397333333333333 0.150879133840714 0.0141278686554411 1.67221430417872 3.56099689802595 Q8IYJ3 SYTL1 Q8IYJ3.S199.p_SYTL1 Q8IYJ3_S199s _1_1_199_199 Q8IYJ3 Q8IYJ3 Synaptotagmin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13875.13875.4 28.12 28.12 5.636 4 1 1 0 1415.1342 5577.5472 S199s TMT10 166 (K) ASDPEEASQAQEDPGQGDQQVCAEEADPELEPAsGGEQEPRPQQAQTK (A) AS(0.0)DPEEAS(0.0)QAQEDPGQGDQQVCAEEADPELEPAS(0.99)GGEQEPRPQQAQT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SYTL1 62141.3 1 4 1335.1 152.58 HUMAN 1 8.2137 18.4992 DPELHQESDMEFNNT-p Q14789-2;S38-p DPELHQESDMEFNNT 0.97481484113528 0.0940123992258366 -0.00566666666666668 0.200666666666667 0.216650325217461 13.580611893267 -0.00566666666666668 0.200666666666667 0.95133826951957 0.043846891594488 -0.063907551732494 2.6147234468587 Q14789 GOLGB1 Q14789.2.S38.p_GOLGB1 Q14789-2_S38s _1_1_38_38 Q14789-2 Q14789-2 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18546.18546.4 17.46 17.46 3.5 3 1 1 0 846.1274 3301.5116 S38s TMT10 28 (R) APLDPELHQEsDMEFNNTTQEDVQER (L) APLDPELHQES(0.99)DMEFNNT(0.0)T(0.0)QEDVQER s:Phosphorylated S GOLGB1 378557.2 1 2 93.1 610.98 HUMAN 1 -0.2167 13.5806 DPERRAKSPTPDGSE-p J3QR07;S146-p DPERRAKSPTPDGSE 0.17019449125244 0.256538183577856 0.217666666666667 0.153333333333333 15.3484180179231 7.78165569957079 0.217666666666667 0.153333333333333 0.0291848992364891 0.166661171417874 2.94405629400824 1.59676775697603 J3QR07 YTHDC1 J3QR07.S146.p_YTHDC1 J3QR07_S146s _1_1_146_146 J3QR07 J3QR07|Q96MU7|Q96MU7-2 YTH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3274.3274.3 7.46 7.46 1.303 3 1 1 0 613.6558 1758.9863 S146s TMT10 143 (R) RAKsPTPDGSER (I) RAKS(0.99)PT(0.0)PDGS(0.0)ER K:TMT10,s:Phosphorylated S YTHDC1 85871.1 6 7 702.1 239.92 HUMAN 1 15.3484 7.7817 DPGASGMSPRASPLP-p Q8NDT2;S109-p DPGASGMSPRASPLP 0.498832140538553 0.307010337798777 0.116333333333333 0.11 5.56605048041156 6.77733721809544 0.116333333333333 0.11 0.277584333820877 0.210022719744321 1.20685308876602 1.42159786408667 Q8NDT2 RBM15B Q8NDT2.S109.p_RBM15B Q8NDT2_S109s _1_1_109_109 Q8NDT2 Q8NDT2 Putative RNA-binding protein 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6072.6072.2 14.16 11.18 2.092 3 1 1 0 749.8311 1418.6895 S109s TMT10 99 (K) ASGDPGASGMsPR (A) AS(0.0)GDPGAS(0.0)GMS(0.99)PR s:Phosphorylated S RBM15B 97489 2 2 199.1 454.11 HUMAN 1 5.5661 6.7773 DPGEMPQSPTGLGQP-p F8VU39;S1395-p DPGEMPQSPTGLGQP 0.392306727378366 0.00731583371679964 0.142 -0.462333333333333 7.49498666384518 30.5467331414922 0.142 -0.462333333333333 0.178033337582742 0.000881711866654948 1.54740960612192 -6.58951226527461 F8VU39 BAZ2A F8VU39.S1395.p_BAZ2A F8VU39_S1395s _1_1_1395_1395 F8VU39 Q9UIF9|F8VU39|Q9UIF9-3|Q9UIF9-2|J3KPG5 Bromodomain adjacent to zinc finger domain protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12012.12012.3 20.49 15.88 3.295 2 1 1 0 821.0821 2381.2648 S1395s TMT10 1385 (R) RAGDPGEMPQsPTGLGQPK (R) RAGDPGEMPQS(0.99)PT(0.0)GLGQPK K:TMT10,s:Phosphorylated S BAZ2A 212873.4 11 11 471.1 302.34 HUMAN 1 7.495 -30.5467 DPGFPAPSPPPADSP-p Q6ZSZ5;S1124-p DPGFPAPSPPPADSP 0.181705792202261 0.0848803865187689 -0.220333333333333 -0.217 14.5865566501775 14.1794198363687 -0.220333333333333 -0.217 0.0347811818436034 0.0381995297271616 -2.80126318541607 -2.72426045160051 Q6ZSZ5 ARHGEF18 Q6ZSZ5.S1124.p_ARHGEF18 Q6ZSZ5_S1124s _1_1_1124_1124 Q6ZSZ5 Q6ZSZ5|Q6ZSZ5-2 Rho guanine nucleotide exchange factor 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22543.22543.4 13.75 13.75 1.126 5 1 1 0 855.4225 3338.7098 S1124s TMT10 1110 (R) HSPAPPPDPGFPAPsPPPADSPSEGFSLK (A) HS(0.0)PAPPPDPGFPAPS(0.99)PPPADS(0.0)PS(0.0)EGFS(0.0)LK K:TMT10,s:Phosphorylated S ARHGEF18 131234.5 4 9 799.1 223.19 HUMAN 1 -14.5866 -14.1794 DPGLPRYSPTRRWSP-p Q5T1R4;S2067-p DPGLPRYSPTRRWSP 0.90916953958039 0.0127185670821738 0.02 0.444 0.812054364021746 26.4212264070542 0.02 0.444 0.829458312054763 0.00227969821561125 0.22604622924268 5.40571956018325 Q5T1R4 HIVEP3 Q5T1R4.S2067.p_HIVEP3 Q5T1R4_S2067s _1_1_2067_2067 Q5T1R4 Q5T1R4|Q5T1R4-2 Transcription factor HIVEP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14869.14869.3 13.52 7.25 1.123 5 1 1 0 690.3462 1989.0603 S2067s TMT10 2055 (K) LEGTTDPGLPRYsPTR (R) LEGT(0.0)T(0.0)DPGLPRY(0.0)S(0.99)PT(0.0)R s:Phosphorylated S HIVEP3 261285.6 1 37 465.1 303.46 HUMAN 1 0.8121 26.4212 DPGSAAPYLKTKFIC-p P40763;Y705-p DPGSAAPYLKTKFIC 0.0334086386812578 0.080826053278948 0.972666666666667 0.498666666666667 34.3629811323521 14.4886288247609 0.972666666666667 0.498666666666667 0.000366186126814206 0.0355743617910922 7.87753117854865 2.78134236813601 P40763 STAT3 P40763.Y705.p_STAT3 P40763_Y705y _1_1_705_705 P40763 P40763|P40763-3|G8JLH9 Signal transducer and activator of transcription 3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.13098.13145.4 28.71 20.26 14.125 4 1 1 0 760.8632 2960.4613 Y705y TMT10 686 (K) YCRPESQEHPEADPGSAAPyLK (T) Y(0.0)CRPES(0.0)QEHPEADPGS(0.0)AAPY(0.99)LK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y STAT3 88865 2 1 101.1 28.71 HUMAN 1 34.363 14.4886 DPHKTPASPVVHIRG-p P14866;S101-p DPHKTPASPVVHIRG 0.0466874864502887 0.0574912329713743 -0.468333333333333 0.305333333333333 29.5800636331326 16.5265112612773 -0.468333333333333 0.305333333333333 0.0011015231698283 0.0222509661922586 -6.30536753856121 3.16762006742859 P14866 HNRNPL P14866.S101.p_HNRNPL P14866_S101s _1_1_101_101 P14866 P14866 Heterogeneous nuclear ribonucleoprotein L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10936.10936.3 14.68 14.68 2.737 2 1 1 0 462.5882 1305.784 S101s TMT10 98 (K) TPAsPVVHIR (G) T(0.0)PAS(0.99)PVVHIR s:Phosphorylated S HNRNPL 64759.2 2 2 846.1 213.74 HUMAN 1 -29.5801 16.5265 DPHLGTPSPEDCELE-p Q12851;S298-p DPHLGTPSPEDCELE 0.307533175710051 0.214897223185925 0.142333333333333 0.248333333333333 9.56966073018675 8.78624820789375 0.142333333333333 0.248333333333333 0.11041648736295 0.132243757095604 1.90703275317517 1.77074167614933 Q12851 MAP4K2 Q12851.S298.p_MAP4K2 Q12851_S298s _1_1_298_298 Q12851 Q12851 Mitogen-activated protein kinase kinase kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22703.22703.4 26.53 22.6 1.103 7 1 1 0 907.3998 3546.5991 S298s TMT10 289 (K) ASDPHLGTPsPEDCELETYDMFPDTIHSR (G) AS(0.0)DPHLGT(0.0)PS(0.99)PEDCELET(0.0)Y(0.0)DMFPDT(0.0)IHS(0.0)R C:Carbamidomethylation,s:Phosphorylated S MAP4K2 92524.2 1 2 1581.1 129.87 HUMAN 1 9.5697 8.7862 DPISTSESSEEEEEA-p E7ETY2;S87-p DPISTSESSEEEEEA 0.115313884527732 0.0584649017029258 -0.292333333333333 -0.286666666666667 19.5192533707547 16.4223995334705 -0.292333333333333 -0.286666666666667 0.0111705527288848 0.0227908250135797 -3.776528126618 -3.14742431378771 E7ETY2 TCOF1 E7ETY2.S87.p_TCOF1 E7ETY2_S87sS88s_2_2_87_88 E7ETY2 E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2|Q13428-5 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19883.19883.3 18.61 18.61 2.466 7 2 2 0 1024.777 2912.3784 S87s S88s TMT10 78 (R) VSDPISTSEssEEEEEAEAETAK (A) VS(0.0)DPIS(0.0)T(0.0)S(0.0)ES(0.99)S(0.99)EEEEEAEAET(0.0)AK K:TMT10,s:Phosphorylated S TCOF1 152529.5 1 37 19.1 1034.65 HUMAN 1 -19.5193 -16.4224 DPKLCTKSPRKRLSS-p Q2KHR2;S558-p DPKLCTKSPRKRLSS 0.0360961121648541 0.00224652614039878 -0.605 -1.21 33.0554526761644 41.0666662161318 -0.605 -1.21 0.000494828530998121 7.82228037533938e-05 -7.41837709121626 -10.6216958861446 Q2KHR2 RFX7 Q2KHR2.S558.p_RFX7 Q2KHR2_S558s _1_1_558_558 Q2KHR2 Q2KHR2|Q2KHR2-2|H0YLX2 DNA-binding protein RFX7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6807.6807.3 7.15 1.84 1.29 2 1 1 0 467.2562 1319.787 S558s TMT10 554 (K) LCTKsPR (K) LCT(0.0)KS(0.99)PR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RFX7 147863 3 10 511.1 287.25 HUMAN 1 -33.0555 -41.0667 DPLAKAASAAGVPLE-p J3KQR7;S372-p DPLAKAASAAGVPLE 0.0871905809717546 0.562007402958364 0.502666666666667 -0.0796666666666666 22.5632855771183 3.37131350039855 0.502666666666667 -0.0796666666666667 0.00554206279485876 0.460117392494281 4.45194074880618 -0.794752197638549 J3KQR7 NotFound J3KQR7.S372.p_NotFound J3KQR7_S372s _1_1_372_372 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15052.15052.2 10 10 10.002 2 1 1 0 961.4844 1841.9919 S372s TMT10 370 (K) AAsAAGVPLEASGEQVR (L) AAS(0.99)AAGVPLEAS(0.0)GEQVR s:Phosphorylated S CEP170B 172326.6 1 3 51.1 746.11 HUMAN 1 22.5633 -3.3713 DPLEHCVSPRTRARS-p Q1MSJ5;S24-p DPLEHCVSPRTRARS 0.93306667659969 0.467517675849459 0.021 -0.0933333333333333 0.591383674237532 4.40188971916877 0.021 -0.0933333333333333 0.872693281596341 0.362920105190394 0.167987453221955 -0.993032156177419 Q1MSJ5 CSPP1 Q1MSJ5.S24.p_CSPP1 Q1MSJ5_S24s _1_1_24_24 Q1MSJ5 Q1MSJ5|Q1MSJ5-1 Centrosome and spindle pole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30747.30747.4 13.29 13.29 1.79 4 1 1 0 809.1541 3153.6386 S24s TMT10 1 (-) MLFPLQVAAVTSSVRDDPLEHCVsPR (T) MLFPLQVAAVT(0.0)S(0.0)S(0.0)VRDDPLEHCVS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S CSPP1 145804.7 1 1 1677.1 121.74 HUMAN 1 0.5914 -4.4019 DPLEYLQSDEEDDEK-p Q7RTV3;S310-p DPLEYLQSDEEDDEK 0.567957312649826 0.0156734106482018 0.0856666666666667 -0.442 4.52298072721692 24.9502172351337 0.0856666666666667 -0.442 0.352940849996359 0.00319873510419833 1.01586798669874 -5.02492390782858 Q7RTV3 ZNF367 Q7RTV3.S310.p_ZNF367 Q7RTV3_S310s _1_1_310_310 Q7RTV3 Q7RTV3 Zinc finger protein 367 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23069.23069.3 21.8 19.33 1.215 2 1 1 0 1021.4541 2982.374 S310s TMT10 297 (K) ADQEQQDPLEYLQsDEEDDEK (R) ADQEQQDPLEY(0.0)LQS(0.99)DEEDDEK K:TMT10,s:Phosphorylated S ZNF367 38923.8 7 4 1434.1 142.66 HUMAN 1 4.523 -24.9502 DPLGRGRSYENLLGR-p C9J069;S468-p DPLGRGRSYENLLGR 0.788058272894985 0.0723095137634074 -0.0376666666666667 0.251 1.9936911226702 15.1597368509949 -0.0376666666666667 0.251 0.631874585046499 0.030480796741835 -0.507404440633822 2.90654252194808 C9J069 C9orf172 C9J069.S468.p_C9orf172 C9J069_S468s _1_1_468_468 C9J069 C9J069 Uncharacterized protein C9orf172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11777.11777.3 13.98 13.98 7.834 2 1 1 0 491.919 1393.7749 S468s TMT10 466 (R) GRsYENLLGR (E) GRS(0.99)Y(0.0)ENLLGR s:Phosphorylated S C9orf172 107960.6 3 8 430.1 316.49 HUMAN 1 -1.9937 15.1597 DPLINPISHRHSVKS-p Q6P2Q9;S360-p DPLINPISHRHSVKS 0.182356635635771 0.918179306865522 0.235 0.018 14.5381860569737 0.521704808358058 0.235 0.018 0.0351707309492259 0.886807830277375 2.79227794657992 0.149174109854933 Q6P2Q9 PRPF8 Q6P2Q9.S360.p_PRPF8 Q6P2Q9_S360s_1_1_360_360 Q6P2Q9 Q6P2Q9 Pre-mRNA-processing-splicing factor 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33742.33742.3 7.01 7.01 2.317 3 1 1 0 923.1133 2686.3714 N357n S360s TMT10 342 (K) TEDPDLPAFYFDPLInPIsHR (H) T(0.0)EDPDLPAFY(0.0)FDPLIN(1.0)PIS(0.99)HR n:Deamidated,s:Phosphorylated S PRPF8 274907.6 1 1 3766.1 43.6 HUMAN 1 14.5382 0.5217 DPLIRWDSYENLSAD-p Q68CZ2;S332-p DPLIRWDSYENLSAD 0.878580170278046 0.572297517779663 0.0263333333333333 0.0873333333333333 1.10447374429223 3.26755830422967 0.0263333333333333 0.0873333333333333 0.775447902453713 0.471242194298074 0.299883092854932 0.774137335719747 Q68CZ2 TNS3 Q68CZ2.S332.p_TNS3 Q68CZ2_S332s _1_1_332_332 Q68CZ2 Q68CZ2|Q68CZ2-3 Tensin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23269.23269.3 21.85 21.85 2.51 6 1 1 0 1087.5045 3180.5323 S332s Hydrogen 330 (R) WDsYENLSADGEVLHTQGPVDGSLYAK (V) WDS(0.99)Y(0.0)ENLS(0.0)ADGEVLHT(0.0)QGPVDGS(0.0)LY(0.0)AK K:TMT10-Lys-Only,s:Phosphorylated S TNS3 156460.9 8 1 183.1 477.16 HUMAN 1 1.1045 3.2676 DPLLRGVSPTPSKIP-p F8W130;S16-p DPLLRGVSPTPSKIP 0.778996094549543 0.0173712533161807 0.0813333333333333 -0.557 2.08403209261328 24.2644535990159 0.0813333333333334 -0.557 0.618866238229855 0.00374588672374505 0.527332162760622 -4.85403800343698 F8W130 TROAP F8W130.S16.p_TROAP F8W130_S16s _1_1_16_16 F8W130 F8W130|Q12815|B7Z5Q9|Q12815-2|Q12815-3|F8VXF3|F8VVT5|F8VVX4|F8VR46|F8VXV6 Tastin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8052.8052.2 11.47 8.58 1.264 3 1 1 0 655.8595 1230.7458 S16s TMT10 14 (R) GVsPTPSK (I) GVS(0.99)PT(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S TROAP 95330.1 5 1 1545.1 132.83 HUMAN 1 2.084 -24.2645 DPLLSPASPKRRRCA-p Q53H80;S21-p DPLLSPASPKRRRCA 0.376518154999368 0.00257752375358579 -0.137 -0.732333333333333 7.84512071024137 39.5249968183209 -0.137 -0.732333333333333 0.164243400830924 0.000111557896863341 -1.60828122583454 -9.91974779022249 Q53H80 AKIRIN2 Q53H80.S21.p_AKIRIN2 Q53H80_S21s _1_1_21_21 Q53H80 Q53H80 Akirin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.30802.30802.3 20.75 18.01 1.18 3 1 1 0 680.367 1959.1203 S21s TMT10 10 (R) TLDFDPLLSPAsPK (R) T(0.0)LDFDPLLS(0.0)PAS(0.99)PK K:TMT10,s:Phosphorylated S AKIRIN2 22780.4 6 1 2782.1 70.83 HUMAN 1 -7.8451 -39.525 DPLPGPGSPSHSAPD-p Q9BQQ3;S274-p DPLPGPGSPSHSAPD 0.297330507583042 0.793599814447982 0.164666666666667 0.0313333333333334 9.91108622196609 1.39956904564829 0.164666666666667 0.0313333333333333 0.102068416657423 0.724507850078879 1.9662671518961 0.371267713052608 Q9BQQ3 GORASP1 Q9BQQ3.S274.p_GORASP1 Q9BQQ3_S274s_1_1_274_274 Q9BQQ3 Q9BQQ3|B4E1H8|B3KPY8|Q9BQQ3-3 Golgi reassembly-stacking protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31796.31796.5 25.86 26.91 1.104 8 1 1 0 1166.3381 5731.7345 M265m S274s TMT10 250 (R) QSDYMEALLQAPGSSmEDPLPGPGsPSHSAPDPDGLPHFMETPLQPPPPVQR (V) QS(0.0)DY(0.0)M(0.0)EALLQAPGS(0.0)S(0.0)M(0.99)EDPLPGPGS(0.99)PS(0.0)HS(0.0)APDPDGLPHFM(0.0)ET(0.0)PLQPPPPVQR m:Oxidized methionine,s:Phosphorylated S GORASP1 46709.8 16 3 2976.1 64.26 HUMAN 1 9.9111 1.3996 DPLRHSCSPMGDGDP-p Q9P275-2;S939-p DPLRHSCSPMGDGDP 0.335984361418148 0.0808666583290622 0.153666666666667 0.356 8.83541235715953 14.4839844318587 0.153666666666667 0.356 0.130755138266346 0.0356124257538032 1.77987239903947 2.78048225168799 Q9P275 USP36 Q9P275.2.S939.p_USP36 Q9P275-2_S939s _1_1_939_939 Q9P275-2 Q9P275-2|A0A075B784 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8890.8890.3 17.64 17.64 2.293 3 1 1 0 799.9859 2317.9685 S939s TMT10 936 (R) HSCsPMGDGDPEAMEESPR (K) HS(0.0)CS(0.99)PMGDGDPEAMEES(0.0)PR C:Carbamidomethylation,s:Phosphorylated S USP36 124218 2 17 241.1 413.35 HUMAN 1 8.8354 14.484 DPLTQADSDESEDDL-p A2RU67;S30-p DPLTQADSDESEDDL 0.353352306970121 0.0930288099364818 -0.193666666666667 -0.193333333333333 8.39322152801128 13.6402618028779 -0.193666666666667 -0.193333333333333 0.144769757591037 0.0432487758874876 -1.70331490147131 -2.62557782533277 A2RU67 FAM234B A2RU67.S30.p_FAM234B A2RU67_S30sS33s_2_2_30_33 A2RU67 A2RU67 Protein FAM234B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30889.30889.4 20.28 17.78 4.485 5 2 2 0 1021.2409 3922.006 S30s S33s TMT10 15 (K) KSPDLGEYDPLTQADsDEsEDDLVLNLQK (N) KS(0.0)PDLGEY(0.0)DPLT(0.0)QADS(0.99)DES(0.99)EDDLVLNLQK K:TMT10,s:Phosphorylated S FAM234B 67493.8 2 2 5341.1 20.28 HUMAN 1 -8.3932 -13.6403 DPNSMNVSCLLEDKA-p Q68DQ2;S1298-p DPNSMNVSCLLEDKA 0.98701560524362 0.335409260962587 0.00333333333333333 -0.121333333333333 0.11540883113136 6.28871832971261 0.00333333333333332 -0.121333333333333 0.973776112801011 0.235032633621758 0.0344201868939663 -1.33550551439247 Q68DQ2 CRYBG3 Q68DQ2.S1298.p_CRYBG3 Q68DQ2_S1298s _1_1_1298_1298 Q68DQ2 Q68DQ2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.33498.33498.3 21.52 21.52 7.137 2 1 1 0 867.1019 2519.325 S1298s TMT10 1287 (K) NLLVDPNSMNVsCLLEDK (A) NLLVDPNS(0.0)MNVS(0.99)CLLEDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CRYBG3 333308.2 1 11 582.1 265.87 HUMAN 1 0.1154 -6.2887 DPPAENSSAPEAEQG-p P67809;S314-p DPPAENSSAPEAEQG 0.452192101778898 0.0044956694532519 -0.147666666666667 0.564 6.35826498024398 34.4351059159425 -0.147666666666667 0.564 0.231298865167072 0.000360154966811349 -1.3481438741054 7.88855477988274 P67809 YBX1 P67809.S314.p_YBX1 P67809_S313sS314s_2_2_313_314 P67809 P67809 Nuclease-sensitive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8358.8496.3 12.86 12.86 99 2 2 2 0 762.9716 2126.9676 S313s S314s TMT10 305 (K) AADPPAENssAPEAEQGGAE (-) AADPPAENS(1.0)S(1.0)APEAEQGGAE s:Phosphorylated S YBX1 35923.5 1 19 929.2 199.34 HUMAN 1 -6.3583 34.4351 DPPDPYVSLLLLPDK-p Q9BSJ8-2;S1021-p DPPDPYVSLLLLPDK 0.720519320720127 0.0247232672662646 0.069 0.342333333333333 2.68837952083397 21.8718771233476 0.069 0.342333333333333 0.538470664120068 0.00649848749651368 0.656375409614752 4.28819160081173 Q9BSJ8 ESYT1 Q9BSJ8.2.S1021.p_ESYT1 Q9BSJ8-2_S1021s _1_1_1021_1021 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28839.28839.4 19.05 13.88 7.314 2 1 1 0 669.6115 2595.4547 S1021s TMT10 1010 (R) QNGRDPPDPYVsLLLLPDK (N) QNGRDPPDPY(0.0)VS(0.99)LLLLPDK K:TMT10,s:Phosphorylated S ESYT1 124514 2 10 400.1 328.2 HUMAN 1 2.6884 21.8719 DPPNHARSPGNKGKG-p P26358;S1105-p DPPNHARSPGNKGKG 0.439356541484028 0.818315910364815 0.121666666666667 -0.0273333333333333 6.57856528435481 1.21833580423956 0.121666666666667 -0.0273333333333333 0.219858606779531 0.755381630854466 1.38702228746203 -0.32774995120027 P26358 DNMT1 P26358.S1105.p_DNMT1 P26358_S1105s _1_1_1105_1105 P26358 P26358-2|P26358-3 DNA (cytosine-5)-methyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6207.6207.4 10.21 10.21 5.061 2 1 1 0 548.5217 2111.1034 S1105s TMT10 1095 (K) SFEDPPNHARsPGNK (G) S(0.0)FEDPPNHARS(0.99)PGNK K:TMT10,s:Phosphorylated S DNMT1 185501.2 6 12 431.1 316.29 HUMAN 1 6.5786 -1.2183 DPPPMRHSLPSTFAS-p Q8NAX2;S201-p DPPPMRHSLPSTFAS 0.297363648018023 0.898557812141414 0.203 0.0193333333333334 9.90639103040653 0.651032201607179 0.203 0.0193333333333333 0.102178823289745 0.86078914135766 1.96545187334192 0.183879675917144 Q8NAX2 KDF1 Q8NAX2.S201.p_KDF1 Q8NAX2_S201s_1_1_201_201 Q8NAX2 Q8NAX2 Keratinocyte differentiation factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14240.14240.5 8.25 9.29 1.313 8 1 1 0 861.8105 4209.0568 M198m S201s TMT10 177 (R) ATSPAPDADSCCKEPLADPPPmRHsLPSTFASSPR (G) AT(0.0)S(0.0)PAPDADS(0.0)CCKEPLADPPPM(1.0)RHS(0.99)LPS(0.0)T(0.0)FAS(0.0)S(0.0)PR C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,s:Phosphorylated S KDF1 44496.8 1 5 2331.1 87.55 HUMAN 1 9.9064 0.651 DPPSDMDSEAEDLVG-p Q13439-5;S144-p DPPSDMDSEAEDLVG 0.736579803240874 0.0135477433480363 0.0576666666666667 0.373333333333333 2.51776047185418 25.9652568168976 0.0576666666666666 0.373333333333333 0.56004632636535 0.00253206189920641 0.620638656762569 5.28554319939351 Q13439 GOLGA4 Q13439.5.S144.p_GOLGA4 Q13439-5_S140sS144s_2_2_140_144 Q13439-5 Q13439-5|Q13439-4|Q13439-3|Q86W71 Isoform 5 of Golgin subfamily A member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29742.29958.4 20.28 15.52 4.417 9 2 2 0 1148.0165 4429.0877 S140s S144s TMT10 122 (R) ESLNRLDLDSSTASFDPPsDMDsEAEDLVGNSDSLNK (E) ES(0.0)LNRLDLDS(0.0)S(0.0)T(0.0)AS(0.0)FDPPS(0.99)DMDS(0.99)EAEDLVGNS(0.0)DS(0.0)LNK K:TMT10,s:Phosphorylated S GOLGA4 263236.4 3 15 575.1 268.28 HUMAN 1 2.5178 25.9653 DPPSEANSIQSANAT-p Q8N488;S127-p DPPSEANSIQSANAT 0.114394108260794 0.228331824498323 0.281 0.118333333333333 19.6198220340739 8.44863666144356 0.281 0.118333333333333 0.0109148506259155 0.142934258774971 3.79783095239449 1.71233700651732 Q8N488 RYBP Q8N488.S127.p_RYBP Q8N488_S127s _1_1_127_127 Q8N488 Q8N488 RING1 and YY1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17165.17678.3 18.92 12.24 2.053 6 1 1 0 1018.8703 2974.63 S127s TMT10 115 (K) SDILKDPPSEANsIQSANATTK (T) S(0.0)DILKDPPS(0.0)EANS(0.99)IQS(0.0)ANAT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S RYBP 25049.3 3 3 2169.1 94.66 HUMAN 1 19.6198 8.4486 DPQEMPHSPLGSMPE-p Q9HB58-6;S244-p DPQEMPHSPLGSMPE 0.932495418439431 0.531389300291025 0.0156666666666667 -0.076 0.600162291935888 3.69193299446509 0.0156666666666667 -0.076 0.870931043439384 0.427372625205035 0.170339371199938 -0.857627153900882 Q9HB58 SP110 Q9HB58.6.S244.p_SP110 Q9HB58-6_S244s _1_1_244_244 Q9HB58-6 Q9HB58-6|Q9HB58-7|Q9HB58-3|Q9HB58-5|G5E9C0 Isoform 6 of Sp110 nuclear body protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16741.16741.3 15.22 15.22 2.69 2 1 1 0 944.4591 2751.3846 S244s TMT10 234 (R) DKEDPQEMPHsPLGSMPEIR (D) DKEDPQEMPHS(0.99)PLGS(0.0)MPEIR K:TMT10,s:Phosphorylated S SP110 82536.7 2 3 1355.1 150.64 HUMAN 1 0.6002 -3.6919 DPQGRCPSGDLPGPG-p Q13444;S832-p DPQGRCPSGDLPGPG 0.325800852562895 0.0662173489170026 -0.180666666666667 -0.285333333333333 9.11909541981716 15.6822773279965 -0.180666666666667 -0.285333333333333 0.122487129781365 0.0270254084992736 -1.82898095075387 -3.00534767198066 Q13444 ADAM15 Q13444.S832.p_ADAM15 Q13444_S832s _1_1_832_832 Q13444 Q13444|Q13444-3|Q13444-4|Q13444-5|Q13444-12|Q13444-2|Q13444-11 Disintegrin and metalloproteinase domain-containing protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.35394.35394.3 11.15 11.15 9.941 6 1 1 0 1148.2573 3362.7817 S832s Hydrogen 830 (R) CPsGDLPGPGAGIPPLVVPSRPAPPPPTVSSLYL (-) CPS(0.99)GDLPGPGAGIPPLVVPS(0.0)RPAPPPPT(0.0)VS(0.0)S(0.0)LY(0.0)L C:Carbamidomethylation,s:Phosphorylated S ADAM15 95696.2 6 2 3519.1 49.23 HUMAN 1 -9.1191 -15.6823 DPQKMLLSWDGGESR-p Q658Y4;S332-p DPQKMLLSWDGGESR 0.0600017263869659 0.0119359897334166 0.703 0.534 26.7218657434795 26.8698183443882 0.703 0.534 0.00212722498675495 0.00205597659106127 5.49351224996932 5.52589329079336 Q658Y4 FAM91A1 Q658Y4.S332.p_FAM91A1 Q658Y4_S332s _1_1_332_332 Q658Y4 Q658Y4|E7ER68 Protein FAM91A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24403.24403.2 15.64 11.3 5.145 2 1 1 0 780.3601 1479.7463 S332s TMT10 329 (K) MLLsWDGGESR (S) MLLS(0.99)WDGGES(0.0)R s:Phosphorylated S FAM91A1 94706.1 1 1 1143.1 172.97 HUMAN 1 26.7219 26.8698 DPQQLQLSPLKGLSL-p P31350;S20-p DPQQLQLSPLKGLSL 0.854089980946255 0.00572570550021105 -0.0326666666666667 -1.62 1.32854618628961 32.4578264860378 -0.0326666666666667 -1.62 0.73645358626699 0.000567828715593779 -0.354374927984819 -7.20353958224772 P31350 RRM2 P31350.S20.p_RRM2 P31350_S20s _1_1_20_20 P31350 P31350|A0A286YFD6 Ribonucleoside-diphosphate reductase subunit M2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36875.36875.4 18.04 18.04 3.689 3 1 1 0 728.1589 2829.6473 S20s Acetyl 1 (-) MLSLRVPLAPITDPQQLQLsPLK (G) MLS(0.0)LRVPLAPIT(0.0)DPQQLQLS(0.99)PLK K:TMT10,s:Phosphorylated S RRM2 45162.1 23 1 3089.1 61.01 HUMAN 1 -1.3285 -32.4578 DPRGFTESFGAANIS-p Q12789;S1962-p DPRGFTESFGAANIS 0.647648307006139 0.665955953747741 -0.102 -0.0433333333333333 3.53443212625821 2.41644501581932 -0.102 -0.0433333333333333 0.443156156807962 0.573265093927155 -0.827019616802646 -0.599096692688772 Q12789 GTF3C1 Q12789.S1962.p_GTF3C1 Q12789_S1962s _1_1_1962_1962 Q12789 Q12789 General transcription factor 3C polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20312.20312.3 13.56 13.56 2.313 3 1 1 0 645.9777 1855.95 S1962s TMT10 1958 (R) GFTEsFGAANISQAAR (E) GFT(0.0)ES(0.99)FGAANIS(0.0)QAAR s:Phosphorylated S GTF3C1 241209.8 1 14 225.1 425.73 HUMAN 1 -3.5344 -2.4164 DPRGPRRSPRTQGEG-p Q86UK7;S392-p DPRGPRRSPRTQGEG 0.620003001212767 0.680114025562258 -0.077 -0.054 3.85858902052303 2.28818843218501 -0.077 -0.054 0.411283321251669 0.590447321455503 -0.890000418859108 -0.571648093063851 Q86UK7 ZNF598 Q86UK7.S392.p_ZNF598 Q86UK7_S392s _1_1_392_392 Q86UK7 Q86UK7|Q86UK7-3|Q86UK7-2|H3BQQ2 E3 ubiquitin-protein ligase ZNF598 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.2778.2778.3 9.09 9.09 99 1 1 1 0 519.586 1476.7778 S392s Hydrogen 382 (R) GPEDPRGPRRsPR (T) GPEDPRGPRRS(1.0)PR s:Phosphorylated S ZNF598 100461 4 1 2531.2 79.67 HUMAN 1 -3.8586 -2.2882 DPRRGVGSPPGRKKT-p O96028-3;S437-p DPRRGVGSPPGRKKT 0.553494632213171 0.0013036590626876 -0.09 -1.096 4.74187143680869 46.9706501859671 -0.09 -1.096 0.335592971287371 2.00879205212704e-05 -1.05653511186211 -13.759398409927 O96028 WHSC1 O96028.3.S437.p_WHSC1 O96028-3_S437s _1_1_437_437 O96028-3 O96028|O96028-3|O96028-5|O96028-6 Isoform 3 of Histone-lysine N-methyltransferase NSD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3687.3687.2 9.89 6.35 99 1 1 1 0 403.6816 726.3893 S437s Hydrogen 434 (R) GVGsPPGR (K) GVGS(1.0)PPGR s:Phosphorylated S NSD2 72093.4 11 11 410.1 322.95 HUMAN 1 -4.7419 -46.9707 DPRRLRPSLDFDKMN-p Q9NYF3;S299-p DPRRLRPSLDFDKMN 0.664039324196506 0.90878567646156 -0.0666666666666667 0.0126666666666667 3.32770124952217 0.581737026831879 -0.0640928814960446 0.0126666666666667 0.464761211425817 0.87463388213617 -0.786221213638555 0.16538323154663 Q9NYF3 FAM53C Q9NYF3.S299.p_FAM53C Q9NYF3_S299s _1_1_299_299 Q9NYF3 Q9NYF3 Protein FAM53C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18378.18378.3 9.65 3.31 99 1 1 1 0 543.6321 1548.915 S299s TMT10 296 (R) LRPsLDFDK (M) LRPS(1.0)LDFDK K:TMT10,s:Phosphorylated S FAM53C 43832.4 3 10 976.1 192.85 HUMAN 1 -3.3277 0.5817 DPRRRLRSYEDMIGE-p O60716-3;S320-p DPRRRLRSYEDMIGE 0.435048063020442 0.0463789781617182 0.131333333333333 0.252 6.65597648944634 17.8448496145552 0.131333333333333 0.252 0.215974437244479 0.0164253653567032 1.40064887567275 3.42815756559263 O60716 CTNND1 O60716.3.S320.p_CTNND1 O60716-3_S320s _1_1_320_320 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-24 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24099.24099.3 29.69 29.69 2.997 5 1 1 0 1121.4963 3282.5161 S320s Hydrogen 318 (R) LRsYEDMIGEEVPSDQYYWAPLAQHER (G) LRS(0.99)Y(0.0)EDMIGEEVPS(0.0)DQY(0.0)Y(0.0)WAPLAQHER s:Phosphorylated S CTNND1 105545.3 25 21 21.1 1014.17 HUMAN 1 6.656 17.8448 DPRVDDDSLGEFPVT-p J3KMZ8;S142-p DPRVDDDSLGEFPVT 0.186123820740466 0.0154461726378156 0.245333333333333 0.348 14.3520961452189 25.0545730242172 0.245333333333333 0.348 0.0367105072532377 0.00312278940757036 2.75779628819236 5.05128914608122 J3KMZ8 DPF2 J3KMZ8.S142.p_DPF2 J3KMZ8_S142s _1_1_142_142 J3KMZ8 J3KMZ8|Q92785|Q92785-2 Zinc finger protein ubi-d4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19602.19602.2 17.28 17.28 8.155 3 1 1 0 980.4491 1879.9235 S142s TMT10 138 (R) VDDDsLGEFPVTNSR (A) VDDDS(0.99)LGEFPVT(0.0)NS(0.0)R s:Phosphorylated S DPF2 46920.6 9 2 1300.1 156.5 HUMAN 1 14.3521 25.0546 DPRVLSNSGWGQTPI-p Q8NDV7;S721-p DPRVLSNSGWGQTPI 0.108751622891632 0.0125009818323055 -0.602666666666667 -0.493 20.1863331068837 26.5499408783236 -0.602666666666667 -0.493 0.00958002603451998 0.00221312483726445 -3.91905405851065 -5.44000194952612 Q8NDV7 TNRC6A Q8NDV7.S721.p_TNRC6A Q8NDV7_S721s _1_1_721_721 Q8NDV7 Q8NDV7|Q8NDV7-5|Q8NDV7-6|Q8NDV7-2 Trinucleotide repeat-containing gene 6A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23133.23133.3 17.12 14.13 1.106 3 1 1 0 642.3486 1845.0635 S721s TMT10 717 (R) VLSNsGWGQTPIK (Q) VLS(0.0)NS(0.99)GWGQT(0.0)PIK K:TMT10,s:Phosphorylated S TNRC6A 211092.3 1 2 181.1 478.43 HUMAN 1 -20.1863 -26.5499 DPSCLKWTPPKGT__-p O95251;T606-p DPSCLKWTPPKGT__ 0.391178814803887 0.25305273421688 0.119333333333333 -0.131666666666667 7.52624004684559 7.86073648759505 0.119333333333333 -0.131666666666667 0.176756744977505 0.163653896946619 1.55285003997747 -1.61049135598849 O95251 KAT7 O95251.T606.p_KAT7 O95251_T606t _1_1_606_606 O95251 O95251|O95251-4|O95251-2|O95251-5|O95251-3|E7EUP3 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21310.21310.3 9.13 8.05 2.94 4 1 1 0 829.4312 2406.3128 T606t TMT10 597 (K) TMDPSCLKWtPPKGT (-) T(0.0)MDPS(0.0)CLKWT(0.99)PPKGT(0.0) C:Carbamidomethylation,K:TMT10,t:Phosphorylated T KAT7 71325.8 1 13 691.1 243.06 HUMAN 1 7.5262 -7.8607 DPSGCAPSPGAYDVK-p O75330-3;S20-p DPSGCAPSPGAYDVK 0.800379409372004 0.00363969124207897 0.0713333333333333 -0.799 1.86191772152704 36.2211494059902 0.0713333333333333 -0.799 0.651340716922781 0.000238717940718151 0.478000838802997 -8.55481393883708 O75330 HMMR O75330.3.S20.p_HMMR O75330-3_S20s _1_1_20_20 O75330-3 O75330-3|O75330-2 Isoform 3 of Hyaluronan mediated motility receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14344.14344.3 14.55 14.55 5.214 3 1 1 0 826.0626 2396.2069 S20s TMT10 10 (K) RFNDPSGCAPsPGAYDVK (T) RFNDPS(0.0)GCAPS(0.99)PGAY(0.0)DVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HMMR 84626.5 1 1 2460.1 82.37 HUMAN 1 1.8619 -36.2211 DPSIVNISDEMAKTA-p Q9Y6M7-13;S1082-p DPSIVNISDEMAKTA 0.108049516126761 0.878083176837687 0.319666666666667 0.0263333333333333 20.3520142861334 0.793021376145813 0.319666666666667 0.0263333333333333 0.00922143631724311 0.833101396349563 3.95490700235282 0.221101370235141 Q9Y6M7 SLC4A7 Q9Y6M7.13.S1082.p_SLC4A7 Q9Y6M7-13_S1082s _1_1_1082_1082 Q9Y6M7-13 Q9Y6M7-7|Q9Y6M7-8|Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-5 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25327.25327.3 16.83 16.83 6.45 4 1 1 0 769.3848 2226.1728 S1082s TMT10 1072 (K) YSVDPSIVNIsDEMAK (T) Y(0.0)S(0.0)VDPS(0.0)IVNIS(0.99)DEMAK K:TMT10,s:Phosphorylated S SLC4A7 128884.6 1 15 207.1 445.25 HUMAN 1 20.352 0.793 DPSNRSNSMLELAPK-p Q9P2M7;S149-p DPSNRSNSMLELAPK 0.194002306690035 0.117169286111329 0.203666666666667 0.204333333333333 13.8989256045282 12.2784101001479 0.203666666666667 0.204333333333333 0.0407481071548442 0.0591778237418683 2.67437976005069 2.3805959564776 Q9P2M7 CGN Q9P2M7.S149.p_CGN Q9P2M7_S149s _1_1_149_149 Q9P2M7 Q9P2M7|Q9P2M7-2 Cingulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20933.20933.2 14.1 8.79 2.233 2 1 1 0 814.4307 1547.8867 S149s TMT10 147 (R) SNsMLELAPK (V) S(0.0)NS(0.99)MLELAPK K:TMT10,s:Phosphorylated S CGN 136611.7 17 6 239.1 416.31 HUMAN 1 13.8989 12.2784 DPSVPPRTPQEYLRR-p O14893;T48-p DPSVPPRTPQEYLRR 0.770174888522599 0.153488107273693 0.061 -0.147333333333333 2.17210571567673 10.7025456701382 0.061 -0.147333333333333 0.606442219353909 0.0850639279438916 0.546587525332613 -2.10315700131248 O14893 GEMIN2 O14893.T48.p_GEMIN2 O14893_T48t _1_1_48_48 O14893 O14893|O14893-2 Gem-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.32576.32576.4 12.49 12.49 1.178 4 1 1 0 859.4193 3354.7241 T48t TMT10 28 (R) LLPVEPCDLTEGFDPSVPPRtPQEYLR (R) LLPVEPCDLT(0.0)EGFDPS(0.0)VPPRT(0.99)PQEY(0.0)LR C:Carbamidomethylation,t:Phosphorylated T GEMIN2 32041 1 2 1657.1 123.25 HUMAN 1 2.1721 -10.7025 DPSYEQSSGEDDGGH-p Q96BU1;S73-p DPSYEQSSGEDDGGH 0.0948633510902073 0.129109098627485 -0.421666666666667 0.401333333333333 21.7445618005618 11.7172380862897 -0.421666666666667 0.401333333333333 0.00669181336467278 0.0673404774688199 -4.26376026621361 2.28117182539433 Q96BU1 S100PBP Q96BU1.S73.p_S100PBP Q96BU1_S72sS73s_2_2_72_73 Q96BU1 Q96BU1|Q96BU1-2 S100P-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9085.9085.3 17.19 17.19 4.778 4 2 2 0 933.3787 2638.1793 S72s S73s TMT10 64 (K) EDDPSYEQssGEDDGGHVEK (G) EDDPS(0.0)Y(0.0)EQS(0.99)S(0.99)GEDDGGHVEK K:TMT10,s:Phosphorylated S S100PBP 45923.5 1 4 3207.1 57.45 HUMAN 1 -21.7446 11.7172 DPTHDVKTPNTETRT-p Q8WWK9;T579-p DPTHDVKTPNTETRT 0.427827084939138 0.00529828536418586 -0.124 -0.509666666666667 6.79003542820307 33.0596474358478 -0.124 -0.509666666666667 0.209409537289409 0.000494350817200245 -1.42420762030341 -7.40646964550464 Q8WWK9 CKAP2 Q8WWK9.T579.p_CKAP2 Q8WWK9_T579t _1_1_579_579 Q8WWK9 Q8WWK9|Q8WWK9-5|Q8WWK9-6 Cytoskeleton-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6106.6106.5 15.66 15.66 2.229 5 1 1 0 522.2809 2527.4083 T579t TMT10 570 (K) TKDPTHDVKtPNTETR (T) T(0.0)KDPT(0.0)HDVKT(0.99)PNT(0.0)ET(0.0)R K:TMT10,t:Phosphorylated T CKAP2 77555.9 2 3 2323.1 87.85 HUMAN 1 -6.79 -33.0596 DPTQDEMSLEGSSYR-p O60229-6;S159-p DPTQDEMSLEGSSYR 0.48969835948334 0.524490753576778 0.094 -0.0776666666666666 5.71499964835068 3.7665737968346 0.094 -0.0776666666666666 0.268225482479132 0.420090267732268 1.23362209618343 -0.872096969340246 O60229 KALRN O60229.6.S159.p_KALRN O60229-6_S159s _1_1_159_159 O60229-6 O60229-6|O60229-5 Isoform 6 of Kalirin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22964.22964.3 11.5 11.5 3.624 5 1 1 0 838.3635 2433.1078 S159s TMT10 148 (K) IFDNDPTQDEMsLEGSSYR (G) IFDNDPT(0.0)QDEMS(0.99)LEGS(0.0)S(0.0)Y(0.0)R s:Phosphorylated S KALRN 143044.5 1 4 450.2 308.79 HUMAN 1 5.715 -3.7666 DPVDTPASTKQRPKR-p P46013;S2355-p DPVDTPASTKQRPKR 0.438963299079984 0.0197123423703082 -0.1075 -0.354 6.58565642960484 23.4037624259254 -0.1075 -0.354 0.219499915323076 0.00456692371615572 -1.38827125438705 -4.64520933847842 P46013 MKI67 P46013.S2355.p_MKI67 P46013_S2344sS2355s_2_2_2344_2355 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15506.15506.4 11.09 11.09 1.192 4 2 2 0 690.5979 2599.4369 S2344s S2355s TMT10 2340 (K) IACKsPQPDPVDTPAsTK (Q) IACKS(0.99)PQPDPVDT(0.0)PAS(0.99)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MKI67 360912.4 2 111 5.1 1918.46 HUMAN 2 -6.5857 -23.4038 DPVLKSPSPVLRLVL-p A0A0U1RQK7;S421-p DPVLKSPSPVLRLVL 0.0651075040180817 0.110374083698285 -0.449 -0.238333333333333 25.6336052884702 12.6371066653642 -0.449 -0.238333333333333 0.00273299898972959 0.0544865529497299 -5.20606028261414 -2.44457975128198 A0A0U1RQK7 NotFound A0A0U1RQK7.S421.p_NotFound A0A0U1RQK7_S419sS421s_2_2_419_421 A0A0U1RQK7 A0A0U1RQK7|A0A0A0MSA7|O43432-3|O43432-2 Eukaryotic translation initiation factor 4 gamma 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16452.16452.5 9.82 4.04 99 2 2 2 0 644.9661 3060.8591 S419s S421s TMT10 407 (K) QEEKPKPDPVLKsPsPVLR (L) QEEKPKPDPVLKS(1.0)PS(1.0)PVLR K:TMT10,s:Phosphorylated S EIF4G3 196410.6 2 9 857.1 210.84 HUMAN 1 -25.6336 -12.6371 DPYDFSDTEEEMPQV-p P25205-2;T758-p DPYDFSDTEEEMPQV 0.995213264133306 0.191434178542461 0.000999999999999992 0.132333333333333 0.0402031452635633 9.44444442384949 0.000999999999999989 0.132333333333333 0.990785598895418 0.113646367177502 0.0120918909433119 1.88461594584273 P25205 MCM3 P25205.2.T758.p_MCM3 P25205-2_S756sT758t_2_2_756_758 P25205-2 P25205-2|J3KQ69 Isoform 2 of DNA replication licensing factor MCM3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15389.15389.5 25.04 19.72 5.537 7 2 2 0 893.2002 4286.0439 S756s T758t M762m TMT10 739 (K) TRQPDAKDGDSYDPYDFsDtEEEmPQVHTPK (T) T(0.0)RQPDAKDGDS(0.0)Y(0.0)DPY(0.0)DFS(0.99)DT(0.99)EEEM(1.0)PQVHT(0.0)PK K:TMT10,s:Phosphorylated S,t:Phosphorylated T,m:Oxidized methionine MCM3 96534.2 56 11 136.1 528.96 HUMAN 2 0.0402 9.4444 DPYEFLQSPEPAASA-p Q9H8M2;S588-p DPYEFLQSPEPAASA 0.792593719033847 0.39300937470929 0.0373333333333333 0.0813333333333333 1.94781070125345 5.39096237900027 0.0373333333333333 0.0813333333333333 0.638585318903813 0.289003939036712 0.497213074306806 1.17499243515655 Q9H8M2 BRD9 Q9H8M2.S588.p_BRD9 Q9H8M2_S588s _1_1_588_588 Q9H8M2 Q9H8M2|Q9H8M2-6|Q9H8M2-1|Q9H8M2-3|Q9H8M2-2 Bromodomain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24266.24266.3 25.87 25.87 5.574 6 1 1 0 1184.5831 3471.7684 S588s TMT10 570 (R) LSVGEQPDVTHDPYEFLQsPEPAASAKT (-) LS(0.0)VGEQPDVT(0.0)HDPY(0.0)EFLQS(0.99)PEPAAS(0.0)AKT(0.0) K:TMT10,s:Phosphorylated S BRD9 67341.2 9 6 1044.1 184.76 HUMAN 1 1.9478 5.391 DQAEARRSKTKEARK-p P84098;S164-p DQAEARRSKTKEARK 0.172013774159731 0.0110512162888973 -0.332333333333333 -0.424333333333333 15.2183701404885 27.4009289281225 -0.332333333333333 -0.424333333333333 0.0300720466177951 0.00181931167785691 -2.91950790211331 -5.67072623154913 P84098 RPL19 P84098.S164.p_RPL19 P84098_S164s _1_1_164_164 P84098 P84098|J3KTE4|J3QR09 60S ribosomal protein L19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8989.8989.4 7.73 7.73 99 1 1 1 0 474.7678 1816.0805 S164s TMT10 154 (K) LLADQAEARRsK (T) LLADQAEARRS(1.0)K K:TMT10,s:Phosphorylated S RPL19 23579.7 3 3 4188.1 35.68 HUMAN 1 -15.2184 -27.4009 DQARSAFSNLFGGEP-p P02786;S10-p DQARSAFSNLFGGEP 0.340868812404779 0.595220213714289 -0.139333333333333 -0.0686666666666667 8.69018614126008 3.05070061132516 -0.139333333333333 -0.0686666666666666 0.13520146137826 0.495370270374792 -1.75473351022089 -0.730587943473387 P02786 TFRC P02786.S10.p_TFRC P02786_S10s _1_1_10_10 P02786 P02786|F8WBE5 Transferrin receptor protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31205.31205.3 20.15 20.15 3.36 5 1 1 0 685.664 1975.0123 S10s TMT10 7 (R) SAFsNLFGGEPLSYTR (F) S(0.0)AFS(0.99)NLFGGEPLS(0.0)Y(0.0)T(0.0)R s:Phosphorylated S TFRC 85326.2 3 1 3387.1 52.22 HUMAN 1 -8.6902 -3.0507 DQCCYSHSPPTPRVS-p Q9NXH9;S625-p DQCCYSHSPPTPRVS 0.155598499514005 0.0128825229095723 0.244 0.379666666666667 16.2376358234522 26.3180961793013 0.244 0.379666666666667 0.023781345236141 0.00233448120667135 3.11395282904807 5.37836587797409 Q9NXH9 TRMT1 Q9NXH9.S625.p_TRMT1 Q9NXH9_S625s _1_1_625_625 Q9NXH9 Q9NXH9|Q9NXH9-2 tRNA (guanine(26)-N(2))-dimethyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5296.5296.3 19.36 19.36 1.194 4 1 1 0 657.6074 1890.8424 S625s TMT10 617 (R) GDQCCYSHsPPTPR (V) GDQCCY(0.0)S(0.0)HS(0.99)PPT(0.0)PR C:Carbamidomethylation,s:Phosphorylated S TRMT1 73430.9 5 2 2689.1 73.91 HUMAN 1 16.2376 26.3181 DQCNVYNSGQRRKLL-p Q1KMD3;S543-p DQCNVYNSGQRRKLL 0.995010386084919 0.129567885877395 0.000999999999999987 0.157666666666667 0.0440740292060175 11.6978573228322 0.000999999999999989 0.157666666666667 0.989902901195826 0.0676416616510741 0.0132503158857907 2.27775172880757 Q1KMD3 HNRNPUL2 Q1KMD3.S543.p_HNRNPUL2 Q1KMD3_S543s _1_1_543_543 Q1KMD3 Q1KMD3|H3BQZ7 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19972.19972.3 19.09 19.09 3.472 2 1 1 0 712.9965 2057.0072 S543s TMT10 532 (R) NFILDQCNVYNsGQR (R) NFILDQCNVY(0.0)NS(0.99)GQR C:Carbamidomethylation,s:Phosphorylated S HNRNPUL2 85673.7 1 7 294.1 379.87 HUMAN 1 0.0441 11.6979 DQDAMEYSSEEEEVD-p A0A0C4DG89;S295-p DQDAMEYSSEEEEVD 0.657302725891418 0.0277238968700976 -0.0883333333333333 0.292333333333333 3.4203255910448 21.1045179112472 -0.0883333333333334 0.292333333333333 0.454953950924362 0.00775440016330397 -0.80456531013709 4.11597825908551 A0A0C4DG89 DDX46 A0A0C4DG89.S295.p_DDX46 A0A0C4DG89_S295sS296s_2_2_295_296 A0A0C4DG89 A0A0C4DG89|Q7L014|D6RJA6 Probable ATP-dependent RNA helicase DDX46 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23888.24089.5 25.25 25.25 2.315 7 2 2 0 1001.2724 4826.4046 M292m S295s S296s TMT10 280 (K) KKGELMENDQDAmEYssEEEEVDLQTALTGYQTK (Q) KKGELM(0.0)ENDQDAM(0.99)EY(0.0)S(0.99)S(0.99)EEEEVDLQT(0.0)ALT(0.0)GY(0.0)QT(0.0)K K:TMT10,m:Oxidized methionine,s:Phosphorylated S DDX46 117972.6 66 8 985.1 191.96 HUMAN 1 -3.4203 21.1045 DQDDEENSEEDEMDS-p Q13043;S320-p DQDDEENSEEDEMDS 0.43106790492079 0.029075605908533 0.146333333333333 0.386333333333333 6.72892524192974 20.799342211263 0.146333333333333 0.386333333333333 0.212376997098125 0.00831889760793893 1.41347449119716 4.04865348080621 Q13043 STK4 Q13043.S320.p_STK4 Q13043_S320s _1_1_320_320 Q13043 Q13043|Q13043-2|F5H5B4 Serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7688.7688.4 27.9 27.9 9.845 4 1 1 0 945.8941 3700.5772 S320s TMT10 304 (K) RQESQQREVDQDDEENsEEDEMDSGTMVR (A) RQES(0.0)QQREVDQDDEENS(0.99)EEDEMDS(0.0)GT(0.0)MVR s:Phosphorylated S STK4 55857.4 10 1 1088.2 179.29 HUMAN 1 6.7289 20.7993 DQDDPSSSDDEGMPY-p Q5JSH3;S472-p DQDDPSSSDDEGMPY 0.965110779182277 0.0476008280784193 0.00666666666666666 0.256333333333333 0.296777303409206 17.6877426277291 0.00666666666666666 0.256333333333333 0.933947082251292 0.0170304348491477 0.0868064799845457 3.39662372706532 Q5JSH3 WDR44 Q5JSH3.S472.p_WDR44 Q5JSH3_S470sS471sS472s_3_3_470_472 Q5JSH3 Q5JSH3|Q5JSH3-2|Q5JSH3-4 WD repeat-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18625.18838.5 21.8 21.8 7.87 7 3 3 0 802.3434 3767.7859 S470s S471s S472s TMT10 456 (K) SVRDEVFHTDQDDPsssDDEGMPYTRPVK (F) S(0.0)VRDEVFHT(0.0)DQDDPS(0.99)S(0.99)S(0.99)DDEGMPY(0.0)T(0.0)RPVK K:TMT10,s:Phosphorylated S WDR44 101935 6 21 95.1 607.92 HUMAN 1 0.2968 17.6877 DQDLPNWSNENVDDR-p E7ETA6;S21-p DQDLPNWSNENVDDR 0.661749549724691 0.312714944476392 0.0713333333333333 -0.137333333333333 3.35796334778453 6.67312358608167 0.0713333333333333 -0.137333333333333 0.461533963171419 0.21512339412983 0.792226401191501 -1.40329522910215 E7ETA6 PCM1 E7ETA6.S21.p_PCM1 E7ETA6_S21s _1_1_21_21 E7ETA6 Q15154|E7ETA6|Q15154-2 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29544.29544.4 9.77 9.77 1.745 2 1 1 0 1147.5015 4506.9789 S21s Acetyl 2 (M) ATGGGPFEDGMNDQDLPNWsNENVDDRLNNMDWGAQQK (K) AT(0.0)GGGPFEDGMNDQDLPNWS(0.99)NENVDDRLNNMDWGAQQK K:TMT10,s:Phosphorylated S PCM1 229381.8 1 1 13.1 1159.95 HUMAN 1 3.358 -6.6731 DQDSLKKSQGVGPIR-p Q9HD26;S280-p DQDSLKKSQGVGPIR 0.0930004911854097 0.0187209260387129 -0.897666666666667 -0.716666666666667 21.9324434057343 23.7706139437171 -0.897666666666667 -0.716666666666667 0.00640848923947397 0.00419699648635176 -4.30649790738784 -4.73346646808569 Q9HD26 GOPC Q9HD26.S280.p_GOPC Q9HD26_S280s _1_1_280_280 Q9HD26 Q9HD26|Q9HD26-2|F5H1Y4|Q9HD26-3 Golgi-associated PDZ and coiled-coil motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9725.9725.3 11.87 11.87 99 1 1 1 0 493.9537 1399.8786 S280s TMT10 280 (K) sQGVGPIRK (V) S(1.0)QGVGPIRK K:TMT10,s:Phosphorylated S GOPC 50918.4 1 2 3710.1 44.75 HUMAN 1 -21.9324 -23.7706 DQEEDEESEGCPVSI-p E7ETA6;S1768-p DQEEDEESEGCPVSI 0.832828544311351 0.0490622492889973 0.061 0.28 1.53444846090005 17.5115013754355 0.061 0.28 0.702352534435676 0.0177357624166244 0.403042446413885 3.3614101780714 E7ETA6 PCM1 E7ETA6.S1768.p_PCM1 E7ETA6_S1768s _1_1_1768_1768 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20646.20646.2 24.46 24.46 6.71 5 1 1 0 1553.1893 3025.4196 S1768s TMT10 1757 (R) SDISDQEEDEEsEGCPVSINLSK (A) S(0.0)DIS(0.0)DQEEDEES(0.99)EGCPVS(0.0)INLS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCM1 229381.8 6 52 13.1 1159.95 HUMAN 1 1.5344 17.5115 DQERFDNSDLSA___-p Q9UHX1;S555-p DQERFDNSDLSA___ 0.191836270649253 0.108869239869212 0.205666666666667 -0.228333333333333 13.9993274748691 12.7242722322045 0.205666666666667 -0.228333333333333 0.0398168824067273 0.0534038757475717 2.69279501100028 -2.4601832231904 Q9UHX1 PUF60 Q9UHX1.S555.p_PUF60 Q9UHX1_S555s _1_1_555_555 Q9UHX1 Q9UHX1 Poly(U)-binding-splicing factor PUF60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19370.19370.3 13.89 13.89 1.202 3 1 1 0 908.4542 2643.3666 S555s TMT10 541 (R) KVVAEVYDQERFDNsDLSA (-) KVVAEVY(0.0)DQERFDNS(0.99)DLS(0.0)A K:TMT10,s:Phosphorylated S PUF60 60045.6 2 7 1450.1 140.84 HUMAN 1 13.9993 -12.7243 DQEWESPSPPKPTVF-p P51397;S51-p DQEWESPSPPKPTVF 0.0510526469894828 0.0278464146420828 -0.488333333333333 -0.291 28.4026273821011 21.0775779731221 -0.488333333333333 -0.291 0.00144456557726566 0.00780265137064146 -5.96046237666763 -4.11000884480836 P51397 DAP P51397.S51.p_DAP P51397_S51s _1_1_51_51 P51397 P51397 Death-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26841.27046.5 23.39 23.39 2.33 4 1 1 0 713.9771 3485.8883 S51s TMT10 41 (K) DKDDQEWESPsPPKPTVFISGVIAR (G) DKDDQEWES(0.0)PS(0.99)PPKPT(0.0)VFIS(0.0)GVIAR K:TMT10,s:Phosphorylated S DAP 11164.4 11 3 2099.1 97.65 HUMAN 1 -28.4026 -21.0776 DQFERIKTLGTGSFG-p P17612;T49-p DQFERIKTLGTGSFG 0.513795810113319 0.0347677052789133 -0.1 -0.287 5.34389720922259 19.6432472342845 -0.1 -0.287 0.292152952113786 0.0108561360317819 -1.16672230848252 -3.79932772462389 P17612 PRKACA P17612.T49.p_PRKACA P17612_T49t _1_1_49_49 P17612 P17612|P17612-2|Q15136 cAMP-dependent protein kinase catalytic subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16569.16569.3 10.71 2.59 2.194 3 1 1 0 558.9843 1594.9681 T49t TMT10 47 (R) IKtLGTGSFGR (V) IKT(0.99)LGT(0.0)GS(0.0)FGR K:TMT10,t:Phosphorylated T PRKACA 40703 1 2 1853.1 110.97 HUMAN 1 -5.3439 -19.6432 DQFGDDKSQAARHGH-p J3KPS0;S212-p DQFGDDKSQAARHGH 0.254275357632195 0.339091636310555 0.290333333333333 -0.162 11.3188111337644 6.22223649408165 0.290333333333333 -0.162 0.0738106256529755 0.238658194401936 2.21205948379364 -1.32373227907005 J3KPS0 DNAJB12 J3KPS0.S212.p_DNAJB12 J3KPS0_S212s _1_1_212_212 J3KPS0 J3KPS0|Q9NXW2-2 DnaJ (Hsp40) homolog, subfamily B, member 12, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9897.9897.3 13.46 13.46 13.463 2 1 1 0 723.0126 2087.0558 S212s TMT10 203 (K) QYDQFGDDKsQAAR (H) QY(0.0)DQFGDDKS(0.99)QAAR K:TMT10,s:Phosphorylated S DNAJB12 45717.4 2 1 5280.1 20.99 HUMAN 1 11.3188 -6.2222 DQGSRHDSEQDNSDN-p P35637;S277-p DQGSRHDSEQDNSDN 0.0468110933846852 0.166374698214593 -0.472666666666667 -0.311666666666667 29.5456627442267 10.2442032646862 -0.472666666666667 -0.311666666666667 0.00111028309043236 0.0945321800625843 -6.2950726729201 -2.02332983382079 P35637 FUS P35637.S277.p_FUS P35637_S277s _1_1_277_277 P35637 P35637|P35637-2 RNA-binding protein FUS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.32824.32824.4 23.86 23.86 1.107 7 1 1 0 1167.5428 4587.1912 S277s TMT10 270 (R) DQGSRHDsEQDNSDNNTIFVQGLGENVTIESVADYFK (Q) DQGS(0.0)RHDS(0.99)EQDNS(0.0)DNNT(0.0)IFVQGLGENVT(0.0)IES(0.0)VADY(0.0)FK K:TMT10,s:Phosphorylated S FUS 53653.1 2 1 3015.1 63.2 HUMAN 1 -29.5457 -10.2442 DQIQEPESEHGSEPD-p Q8WVM7;S1138-p DQIQEPESEHGSEPD 0.298289139550046 0.119472777291263 0.165 -0.265 9.87807544998896 12.1653771384906 0.165 -0.265 0.102847195835207 0.0607382515872517 1.96053557951356 -2.36050571585955 Q8WVM7 STAG1 Q8WVM7.S1138.p_STAG1 Q8WVM7_S1138sS1142s_2_2_1138_1142 Q8WVM7 Q8WVM7|Q68DW7 Cohesin subunit SA-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25654.25654.5 16.8 16.8 1.105 4 2 2 0 999.054 4831.3245 S1138s S1142s TMT10 1124 (R) ENSRPMGDQIQEPEsEHGsEPDFLHNPQMQISWLGQPK (L) ENS(0.0)RPMGDQIQEPES(0.99)EHGS(0.99)EPDFLHNPQMQIS(0.0)WLGQPK K:TMT10,s:Phosphorylated S STAG1 145394.7 6 7 2727.1 72.59 HUMAN 1 9.8781 -12.1654 DQISHRASLEDAPVD-p C9J6P4;S284-p DQISHRASLEDAPVD 0.820901614327748 0.142866565520357 -0.0346666666666667 -0.156666666666667 1.65251716967896 11.1357347817748 -0.0346666666666667 -0.156666666666667 0.683515367122929 0.0769886176482741 -0.430396208364739 -2.1789097967579 C9J6P4 ZC3HAV1 C9J6P4.S284.p_ZC3HAV1 C9J6P4_S284s _1_1_284_284 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2|Q7Z2W4-3 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15616.15616.3 18.42 18.42 1.263 6 1 1 0 1026.1495 2996.4581 S284s TMT10 271 (R) SCTPSPDQISHRAsLEDAPVDDLTR (K) S(0.0)CT(0.0)PS(0.0)PDQIS(0.0)HRAS(0.99)LEDAPVDDLT(0.0)R C:Carbamidomethylation,s:Phosphorylated S ZC3HAV1 115909.2 6 5 361.1 343.37 HUMAN 1 -1.6525 -11.1357 DQKGLSLSPQSPPER-p Q7Z2Z1;S1430-p DQKGLSLSPQSPPER 0.819876131469118 0.0464024046981153 0.032 -0.344 1.66163706077396 17.8411257657057 0.032 -0.344 0.68208153696996 0.016439455291317 0.432493204543144 -3.42740855242873 Q7Z2Z1 TICRR Q7Z2Z1.S1430.p_TICRR Q7Z2Z1_S1430s _1_1_1430_1430 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10993.10993.3 7.34 7.34 7.343 3 1 1 0 578.3033 1652.9281 S1430s TMT10 1426 (K) GLSLsPQSPPERR (G) GLS(0.0)LS(0.99)PQS(0.0)PPERR s:Phosphorylated S TICRR 212850 1 19 238.1 417.32 HUMAN 1 1.6616 -17.8411 DQKTVARTPLGQRSR-p Q9UQ35;T1531-p DQKTVARTPLGQRSR 0.140760843773736 0.542568641334292 -0.377666666666667 -0.123666666666667 17.4151761538282 3.5739707146091 -0.377666666666667 -0.123666666666667 0.0181335312311201 0.439139930227391 -3.34485999230597 -0.83463362561613 Q9UQ35 SRRM2 Q9UQ35.T1531.p_SRRM2 Q9UQ35_T1531t _1_1_1531_1531 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5465.5673.3 12.74 10.44 4.911 2 1 1 0 469.9271 1327.8007 T1531t TMT10 1527 (K) TVARtPLGQR (S) T(0.0)VART(0.99)PLGQR t:Phosphorylated T SRRM2 300351.7 5 99 2.1 3310.34 HUMAN 1 -17.4152 -3.574 DQLEGVNTPRQRAVE-p A0A0A0MSI8;T122-p DQLEGVNTPRQRAVE 0.413312492292849 0.100085717933758 0.14 -0.182666666666667 7.07624700613573 13.211410760889 0.14 -0.182666666666667 0.196053815792908 0.0477374178383951 1.47435335919596 -2.54780756703507 A0A0A0MSI8 NotFound A0A0A0MSI8.T122.p_NotFound A0A0A0MSI8_T122t _1_1_122_122 A0A0A0MSI8 A0A0A0MSI8|O00471 Exocyst complex component 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12990.12990.3 14.75 14.75 99 1 1 1 0 668.6576 1923.9908 T122t TMT10 110 (K) VCHLGDQLEGVNtPR (Q) VCHLGDQLEGVNT(1.0)PR C:Carbamidomethylation,t:Phosphorylated T EXOC5 83144.7 1 1 4920.1 25.04 HUMAN 1 7.0762 -13.2114 DQLFDDESDPFEVLK-p Q8NC51;S25-p DQLFDDESDPFEVLK 0.440577219669288 0.578287092757292 0.151333333333333 0.0743333333333333 6.55708754405172 3.20897328669657 0.151333333333333 0.0743333333333333 0.220948595683017 0.477642179447916 1.38323849652217 0.762435362987246 Q8NC51 SERBP1 Q8NC51.S25.p_SERBP1 Q8NC51_S25s _1_1_25_25 Q8NC51 Q8NC51|Q8NC51-2|Q8NC51-3|Q8NC51-4 Plasminogen activator inhibitor 1 RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36638.36638.3 18.68 18.68 99 1 1 1 0 828.0657 2402.2168 S25s TMT10 17 (R) FDQLFDDEsDPFEVLK (A) FDQLFDDES(1.0)DPFEVLK K:TMT10,s:Phosphorylated S SERBP1 45021.6 4 1 616.1 261.14 HUMAN 1 6.5571 3.209 DQLKAPASPGAGNPP-p Q9ULD9;S627-p DQLKAPASPGAGNPP 0.383203138038762 0.0166981307765404 0.18 0.343 7.71084069366181 24.5391732253425 0.18 0.343 0.169400984758337 0.00351627374128323 1.58495541813091 4.92200620753004 Q9ULD9 ZNF608 Q9ULD9.S627.p_ZNF608 Q9ULD9_S627s _1_1_627_627 Q9ULD9 Q9ULD9|Q9ULD9-2 Zinc finger protein 608 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9534.9534.3 14.08 14.08 7.145 2 1 1 0 619.6617 1777.0009 S627s TMT10 624 (K) APAsPGAGNPPGTPK (G) APAS(0.99)PGAGNPPGT(0.0)PK K:TMT10,s:Phosphorylated S ZNF608 163232.5 2 4 1226.1 164.42 HUMAN 1 7.7108 24.5392 DQLTPDESKERLGKI-p Q15293;S80-p DQLTPDESKERLGKI 0.632975906108807 0.154533138192927 -0.11 -0.175666666666667 3.70129063395683 10.6639549513564 -0.11 -0.175666666666667 0.426452766969361 0.0858231607301431 -0.859582286623934 -2.09642395377819 Q15293 RCN1 Q15293.S80.p_RCN1 Q15293_S80s _1_1_80_80 Q15293 Q15293 Reticulocalbin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17586.17586.3 12.56 12.56 5.195 3 1 1 0 606.9703 1738.9264 S80s TMT10 71 (K) TFDQLTPDEsK (E) T(0.0)FDQLT(0.0)PDES(0.99)K K:TMT10,s:Phosphorylated S RCN1 38889.3 3 1 4140.1 36.82 HUMAN 1 -3.7013 -10.664 DQLTPEESKERLGKI-p O43852-3;S77-p DQLTPEESKERLGKI 0.674589372325876 0.401759132348285 -0.0976666666666667 -0.0983333333333333 3.20382789014903 5.26740490270981 -0.0976666666666667 -0.0983333333333333 0.478208411573886 0.297344226130172 -0.761516528746457 -1.15259976279641 O43852 CALU O43852.3.S77.p_CALU O43852-3_S77s _1_1_77_77 O43852-3 O43852-3|O43852-4|O43852-2|O43852-6 Isoform 3 of Calumenin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17490.17490.3 15.02 15.02 4.352 3 1 1 0 611.6407 1752.942 S77s TMT10 68 (K) TFDQLTPEEsK (E) T(0.0)FDQLT(0.0)PEES(0.99)K K:TMT10,s:Phosphorylated S CALU 38164.4 3 1 3755.1 43.83 HUMAN 1 -3.2038 -5.2674 DQNASTHTPQSSVKT-p Q14677-3;T308-p DQNASTHTPQSSVKT 0.87463617951721 0.0110046346773908 -0.027 0.407 1.13795867464304 27.4374027864489 -0.027 0.407 0.769492041591727 0.00180409632297819 -0.308134678542378 5.68077597014127 Q14677 CLINT1 Q14677.3.T308.p_CLINT1 Q14677-3_T308t _1_1_308_308 Q14677-3 Q14677-3|Q14677-2 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6318.6318.3 20.27 20.27 2.231 6 1 1 0 765.0438 2213.1562 T308t TMT10 298 (K) ASPDQNASTHtPQSSVK (T) AS(0.0)PDQNAS(0.0)T(0.0)HT(0.99)PQS(0.0)S(0.0)VK K:TMT10,t:Phosphorylated T CLINT1 70350.7 3 20 632.1 256.73 HUMAN 1 -1.138 27.4374 DQPEDAGSEDELEEG-p P23443-2;S17-p DQPEDAGSEDELEEG 0.965959546905574 0.00746401945873646 -0.00800000000000001 0.598 0.290844440762252 30.4163706404966 -0.00800000000000001 0.598 0.935223811857113 0.000908579504632076 -0.085123753483703 6.54924122515096 P23443 RPS6KB1 P23443.2.S17.p_RPS6KB1 P23443-2_S17s_1_1_17_17 P23443-2 P23443-2 Isoform Alpha II of Ribosomal protein S6 kinase beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31376.31376.4 19.84 19.84 1.149 3 1 1 0 1365.0828 5376.3252 S17s N28n Acetyl 2 (M) AGVFDIDLDQPEDAGsEDELEEGGQLnESMDHGGVGPYELGMEHCEK (F) AGVFDIDLDQPEDAGS(0.99)EDELEEGGQLN(1.0)ES(0.0)MDHGGVGPY(0.0)ELGMEHCEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated RPS6KB1 56530.6 3 1 1663.1 122.57 HUMAN 1 -0.2908 30.4164 DQPPFGDSDDSVEAD-p Q14676;S495-p DQPPFGDSDDSVEAD 0.94478758147709 0.00590967677173518 0.015 0.499166666666667 0.485082491744242 32.1965150366448 0.015 0.500100806969709 0.894317544722752 0.000603043299525351 0.139211508309053 7.11689132261553 Q14676 MDC1 Q14676.S495.p_MDC1 Q14676_S495sS498s_2_2_495_498 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18268.18268.4 18.21 15.88 7.195 4 2 2 0 829.8765 3156.5486 S495s S498s TMT10 488 (K) DQPPFGDsDDsVEADKSSPGIHLER (S) DQPPFGDS(0.99)DDS(0.99)VEADKS(0.0)S(0.0)PGIHLER K:TMT10,s:Phosphorylated S MDC1 227803.2 6 63 6.1 1662.62 HUMAN 2 0.4851 32.1965 DQPVKMNSLPAERIQ-p P30419;S83-p DQPVKMNSLPAERIQ 0.529434722423025 0.259101601145112 0.134 -0.130666666666667 5.1097356086406 7.72640271170092 0.134 -0.130666666666667 0.308337565538975 0.168795058651029 1.12413022619981 -1.58717476017762 P30419 NMT1 P30419.S83.p_NMT1 P30419_S83s _1_1_83_83 P30419 P30419|B7Z8J4 Glycylpeptide N-tetradecanoyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11467.11467.4 14.96 10.47 9.108 4 1 1 0 821.9169 3204.6774 S83s TMT10 66 (K) EKGSETDSAQDQPVKMNsLPAER (I) EKGS(0.0)ET(0.0)DS(0.0)AQDQPVKMNS(0.99)LPAER K:TMT10,s:Phosphorylated S NMT1 57147.5 2 5 1576.1 130.17 HUMAN 1 5.1097 -7.7264 DQPYEPVSPYSCKEA-p P07814;S688-p DQPYEPVSPYSCKEA 0.652424715540653 0.802599209082192 0.0763333333333333 -0.0293333333333333 3.47805280983742 1.33676126540388 0.0763333333333333 -0.0293333333333333 0.448946633227726 0.735061833379324 0.815944582597229 -0.356304537999058 P07814 EPRS P07814.S688.p_EPRS P07814_S688s _1_1_688_688 P07814 P07814 Bifunctional glutamate/proline--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27893.27893.3 18.36 18.36 3.213 4 1 1 0 911.4255 2652.2879 S688s TMT10 676 (R) GFFICDQPYEPVsPYSCK (E) GFFICDQPY(0.0)EPVS(0.99)PY(0.0)S(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EPRS 172185.3 1 3 375.1 337.76 HUMAN 1 3.4781 -1.3368 DQQESCSSTPGLEEP-p Q14789-2;S1264-p DQQESCSSTPGLEEP 0.201344466647756 0.450935257537981 0.213 0.0846666666666667 13.5167391508623 4.6107260522529 0.213 0.0846666666666667 0.0444965239000596 0.345881548615528 2.60461081365687 1.03201775396905 Q14789 GOLGB1 Q14789.2.S1264.p_GOLGB1 Q14789-2_S1264sT1265t_2_2_1264_1265 Q14789-2 Q14789-2 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26383.26449.4 21.51 21.51 1.104 7 2 2 0 982.4738 3766.93 S1264s T1265t TMT10 1247 (R) ESIDGKLPSTDQQESCSstPGLEEPLFK (A) ES(0.0)IDGKLPS(0.0)T(0.0)DQQES(0.0)CS(0.0)S(0.99)T(0.99)PGLEEPLFK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T GOLGB1 378557.2 1 31 93.1 610.98 HUMAN 1 13.5167 4.6107 DQQKLEMSGSKEVGI-p O15014;S52-p DQQKLEMSGSKEVGI 0.0733303965853216 0.268353223732572 -0.655333333333333 0.128 24.3686822069493 7.52422494687733 -0.655333333333333 0.124825229459588 0.00365705741992872 0.176838778061525 -4.88563997725798 1.55203783463577 O15014 ZNF609 O15014.S52.p_ZNF609 O15014_S52s _1_1_52_52 O15014 O15014|E7ERY8|O15014-2 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10357.10357.3 11.17 11.17 1.102 2 1 1 0 673.3584 1938.0933 S52s TMT10 45 (K) DQQKLEMsGSK (E) DQQKLEMS(0.99)GS(0.0)K K:TMT10,s:Phosphorylated S ZNF609 152443.5 2 1 63.1 699.07 HUMAN 1 -24.3687 7.5242 DQRSTPDSTYSESFK-p Q6ISB3;S214-p DQRSTPDSTYSESFK 0.491784645396761 0.412348405960926 0.102 0.131333333333333 5.67422280904602 5.11769996378599 0.102 0.131333333333333 0.27075576910971 0.307772635603197 1.22630416956996 1.12535211686438 Q6ISB3 GRHL2 Q6ISB3.S214.p_GRHL2 Q6ISB3_S214s _1_1_214_214 Q6ISB3 Q6ISB3|Q6ISB3-2 Grainyhead-like protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14622.14622.2 12.86 12.86 1.161 7 1 1 0 943.9428 1806.9162 S214s TMT10 210 (R) STPDsTYSESFK (D) S(0.0)T(0.0)PDS(0.99)T(0.0)Y(0.0)S(0.0)ES(0.0)FK K:TMT10,s:Phosphorylated S GRHL2 71446.2 4 7 651.1 254.16 HUMAN 1 5.6742 5.1177 DQSFASRSWITIPRK-p Q03188;S316-p DQSFASRSWITIPRK 0.933799035878245 0.0193537512577372 0.0333333333333333 -0.650333333333333 0.585856615267484 23.5384480542891 0.0333333333333334 -0.650333333333333 0.873804623786201 0.00442746559006956 0.166504797811635 -4.67748405232323 Q03188 CENPC Q03188.S316.p_CENPC Q03188_S316s _1_1_316_316 Q03188 Q03188|Q03188-2 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23074.23074.2 10.48 3.32 2.123 2 1 1 0 591.3182 1101.6618 S316s TMT10 316 (R) sWITIPR (K) S(0.99)WIT(0.0)IPR s:Phosphorylated S CENPC 107459.5 2 16 209.1 442.77 HUMAN 1 0.5859 -23.5384 DQSFRTGSPGDAPER-p Q8IWE5;S441-p DQSFRTGSPGDAPER 0.337037368340502 0.0544087863014949 -0.152333333333333 -0.318666666666667 8.7993780757281 16.8545294815134 -0.152333333333333 -0.318666666666667 0.131844553086262 0.0206322718706239 -1.77363493609743 -3.23160162883165 Q8IWE5 PLEKHM2 Q8IWE5.S441.p_PLEKHM2 Q8IWE5_S441s _1_1_441_441 Q8IWE5 Q8IWE5|Q5VVD7 Pleckstrin homology domain-containing family M member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28411.28411.3 17.71 12.83 2.148 5 1 1 0 1126.8391 3298.5346 S441s TMT10 439 (R) TGsPGDAPERPPLCDFSEGLSAPMDFYR (F) T(0.0)GS(0.99)PGDAPERPPLCDFS(0.0)EGLS(0.0)APMDFY(0.0)R C:Carbamidomethylation,s:Phosphorylated S PLEKHM2 114490 5 2 2834.1 68.64 HUMAN 1 -8.7994 -16.8545 DQSNRAVSQGTPYNP-p U3KPR8;S343-p DQSNRAVSQGTPYNP 0.301224036518654 0.369324271086515 0.238666666666667 -0.146333333333333 9.78207765956115 5.7380314490055 0.238666666666667 -0.146333333333333 0.105145873689175 0.266806776053552 1.94387357237165 -1.23746960465998 U3KPR8 NotFound U3KPR8.S343.p_NotFound U3KPR8_S343sT346t_2_2_343_346 U3KPR8 U3KPR8 Homeobox protein Meis1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.38328.38543.4 8.96 0.34 1.447 3 2 2 0 1020.4702 3886.9191 S343s T346t M355m M366m TMT10 341 (R) AVsQGtPYNPDGQPmGGFVMDGQQHmGIRAPGK (T) AVS(0.99)QGT(0.99)PY(0.0)NPDGQPM(0.99)GGFVM(0.0)DGQQHM(0.99)GIRAPGK K:TMT10,s:Phosphorylated S,t:Phosphorylated T,m:Oxidized methionine MEIS1 42089.2 1 2 4238.1 34.97 HUMAN 1 9.7821 -5.738 DQSQKHRSPGNTTTG-p Q9HC77;S204-p DQSQKHRSPGNTTTG 0.511272956349633 0.0105387550079778 -0.103666666666667 -0.439666666666667 5.38525043980109 27.7361516436341 -0.103666666666667 -0.439666666666667 0.289384293620974 0.00168416576764055 -1.17421214424319 -5.76359862567447 Q9HC77 CENPJ Q9HC77.S204.p_CENPJ Q9HC77_S204s _1_1_204_204 Q9HC77 Q9HC77|F6VUX8|Q9HC77-2 Centromere protein J HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.2840.2840.3 10.12 10.12 3.472 4 1 1 0 541.2609 1541.7982 S204s TMT10 202 (K) HRsPGNTTTGER (A) HRS(0.99)PGNT(0.0)T(0.0)T(0.0)GER s:Phosphorylated S CENPJ 154195.7 1 1 1877.1 109.56 HUMAN 1 -5.3853 -27.7362 DQTNVYGSAQRRKMR-p Q9BUJ2;S512-p DQTNVYGSAQRRKMR 0.336940767668124 0.287747195846603 0.139 0.119333333333333 8.8010950653369 7.13847975786982 0.139 0.119333333333333 0.131792438451155 0.193264471836878 1.77393214441673 1.48481386877109 Q9BUJ2 HNRNPUL1 Q9BUJ2.S512.p_HNRNPUL1 Q9BUJ2_S512s _1_1_512_512 Q9BUJ2 Q9BUJ2|Q9BUJ2-2|B7Z4B8|A0A0A0MRA5|Q9BUJ2-4|Q9BUJ2-3 Heterogeneous nuclear ribonucleoprotein U-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14816.14816.2 8.74 8.74 1.867 4 1 1 0 1104.0392 2127.1144 S512s TMT10 501 (R) NYILDQTNVYGsAQRR (K) NY(0.0)ILDQT(0.0)NVY(0.0)GS(0.99)AQRR s:Phosphorylated S HNRNPUL1 96307.3 7 3 999.1 190.09 HUMAN 1 8.8011 7.1385 DQTRPRSSPAFTKRG-p Q5VVQ6;S130-p DQTRPRSSPAFTKRG 0.810690999381857 0.435899426370009 0.0476666666666667 -0.173666666666667 1.7509132897312 4.80443632265765 0.0476666666666667 -0.173666666666667 0.668203384477292 0.330793043399938 0.452905054419134 -1.0678863738126 Q5VVQ6 YOD1 Q5VVQ6.S130.p_YOD1 Q5VVQ6_S130s _1_1_130_130 Q5VVQ6 Q5VVQ6|Q5VVQ6-2 Ubiquitin thioesterase OTU1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11018.11218.2 9.9 2.91 1.387 3 1 1 0 638.3411 1195.7087 S130s TMT10 129 (R) SsPAFTK (R) S(0.0)S(0.99)PAFT(0.0)K K:TMT10,s:Phosphorylated S YOD1 38835.2 4 1 5659.1 17.41 HUMAN 1 1.7509 -4.8044 DQTSGDQSPLPPCTP-p Q06124;S562-p DQTSGDQSPLPPCTP 0.613648628647483 0.0467536667111663 0.0786666666666667 0.242 3.93397072359569 17.7940456026446 0.0786666666666667 0.242 0.40420615988112 0.0166186384570257 0.90448684874461 3.41794549980626 Q06124 PTPN11 Q06124.S562.p_PTPN11 Q06124_S562s _1_1_562_562 Q06124 Q06124|Q06124-2 Tyrosine-protein phosphatase non-receptor type 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17878.17981.4 29.57 22.15 3.169 8 1 1 0 961.6777 3763.7199 S562s TMT10 551 (K) YSLADQTSGDQsPLPPCTPTPPCAEMREDSAR (V) Y(0.0)S(0.0)LADQT(0.0)S(0.0)GDQS(0.99)PLPPCT(0.0)PT(0.0)PPCAEMREDS(0.0)AR C:Carbamidomethylation,s:Phosphorylated S PTPN11 69005.6 12 3 1999.1 103.37 HUMAN 1 3.934 17.794 DQTSKLKYVLQDARF-p J3QR07;Y350-p DQTSKLKYVLQDARF 0.433169253377701 0.465464455074469 -0.145666666666667 0.073 6.69228851391243 4.42883556015287 -0.145666666666667 0.073 0.214176170280461 0.360675335116754 -1.40703497187507 0.998081825329235 J3QR07 YTHDC1 J3QR07.Y350.p_YTHDC1 J3QR07_Y350y _1_1_350_350 J3QR07 J3QR07|Q96MU7|Q96MU7-2 YTH domain-containing protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11964.11964.2 8.5 2.55 99 1 1 1 0 587.2987 1093.6203 Y350y TMT10 350 (K) yVLQDAR (F) Y(1.0)VLQDAR y:Phosphorylated Y YTHDC1 85871.1 2 1 161.1 20.83 HUMAN 1 -6.6923 4.4288 DQVRKWISDWNLTTE-p Q7L2H7;S152-p DQVRKWISDWNLTTE 0.492357649298205 0.459144033636373 -0.110666666666667 0.07 5.66686849038657 4.50653598275141 -0.110666666666667 0.07 0.271214653853597 0.354279808883099 -1.22498351739284 1.01261026226937 Q7L2H7 EIF3M Q7L2H7.S152.p_EIF3M Q7L2H7_S152s _1_1_152_152 Q7L2H7 Q7L2H7|Q7L2H7-2|E9PRY0 Eukaryotic translation initiation factor 3 subunit M HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25797.25797.3 16.32 16.32 5.967 3 1 1 0 763.4131 2208.2632 S152s TMT10 150 (K) WIsDWNLTTEKK (H) WIS(0.99)DWNLT(0.0)T(0.0)EKK K:TMT10,s:Phosphorylated S EIF3M 42958.6 5 3 2071.1 99.26 HUMAN 1 -5.6669 4.5065 DQVSGPPSAPAEDRS-p Q92734;S197-p DQVSGPPSAPAEDRS 0.99316502836986 0.11971257244949 0.00233333333333333 0.244 0.0620728176438257 12.155602693489 0.00233333333333329 0.244 0.985808862630436 0.0608751060285622 0.0186235091348282 2.35876999724912 Q92734 TFG Q92734.S197.p_TFG Q92734_S197s _1_1_197_197 Q92734 Q92734|Q92734-2|Q92734-3|Q92734-4 Protein TFG HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.26247.26247.3 28.13 28.13 1.45 4 1 1 0 924.0939 2690.2929 S197s TMT10 180 (K) NVMSAFGLTDDQVSGPPsAPAEDR (S) NVMS(0.0)AFGLT(0.0)DDQVS(0.0)GPPS(0.99)APAEDR s:Phosphorylated S TFG 43504.2 2 6 2044.1 101.04 HUMAN 1 0.0621 12.1556 DQWDALGSLTHSRRE-p O43707;S507-p DQWDALGSLTHSRRE 0.773240679578005 0.961653000540495 0.0406666666666667 -0.00666666666666665 2.1353879817768 0.24330194962161 0.0406666666666667 -0.00666666666666664 0.611591163341325 0.945518008782968 0.538580220111494 -0.0715593930163766 O43707 ACTN4 O43707.S507.p_ACTN4 O43707_S507s _1_1_507_507 O43707 O43707|O43707-2|O43707-3|F5GXS2 Alpha-actinin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22120.22120.3 16.52 16.52 1.201 3 1 1 0 689.9882 1987.9857 S507s TMT10 498 (K) ICDQWDALGsLTHSR (R) ICDQWDALGS(0.99)LT(0.0)HS(0.0)R C:Carbamidomethylation,s:Phosphorylated S ACTN4 105308.6 3 6 1097.1 178.17 HUMAN 1 2.1354 -0.2433 DRADSRRSWHEESPF-p Q9BY84;S612-p DRADSRRSWHEESPF 0.924864295750906 0.782887036305246 -0.017 0.0306666666666667 0.667967149267199 1.47207671118095 -0.017 0.0306666666666667 0.857439102418866 0.712512239250882 -0.188383994942736 0.388392411172067 Q9BY84 DUSP16 Q9BY84.S612.p_DUSP16 Q9BY84_S612s _1_1_612_612 Q9BY84 Q9BY84 Dual specificity protein phosphatase 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12187.12187.3 9.57 7.62 2.998 2 1 1 0 657.3243 1889.991 S612s TMT10 611 (R) RsWHEESPFEK (Q) RS(0.99)WHEES(0.0)PFEK K:TMT10,s:Phosphorylated S DUSP16 74070.3 4 4 2648.1 75.22 HUMAN 1 -0.668 1.4721 DRAEIEKSPGGGRVG-p Q86US8;S203-p DRAEIEKSPGGGRVG 0.204713889706557 0.068537762840327 -0.506666666666667 -0.264666666666667 13.3270139790471 15.4864447964625 -0.506666666666667 -0.264666666666667 0.0464834765649284 0.0282719341326448 -2.57016346766761 -2.96817756205286 Q86US8 SMG6 Q86US8.S203.p_SMG6 Q86US8_S203s _1_1_203_203 Q86US8 Q86US8 Telomerase-binding protein EST1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7952.7952.5 12.43 12.43 99 1 1 1 0 582.1129 2826.5677 S203s TMT10 189 (K) EEVANKPDRAEIEKsPGGGR (V) EEVANKPDRAEIEKS(1.0)PGGGR K:TMT10,s:Phosphorylated S SMG6 161600 3 1 1491.1 137.14 HUMAN 1 -13.327 -15.4864 DRAGDRNSEDDGVVM-p Q9NY61;S203-p DRAGDRNSEDDGVVM 0.304289476598221 0.171375238393244 0.949 0.783 9.68135152898829 10.0716037700737 0.949 0.783 0.107613026864526 0.0983647795546891 1.92639956869478 1.99334067773671 Q9NY61 AATF Q9NY61.S203.p_AATF Q9NY61_S203s _1_1_203_203 Q9NY61 Q9NY61 Protein AATF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19680.19680.3 20.04 20.04 11.937 4 1 1 0 851.4105 2472.2441 S203s TMT10 198 (R) AGDRNsEDDGVVMTFSSVK (V) AGDRNS(0.99)EDDGVVMT(0.0)FS(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S AATF 63245.9 3 3 2183.1 94.22 HUMAN 1 9.6814 10.0716 DRAITVFSPDGHLFQ-p O14818;S11-p DRAITVFSPDGHLFQ 0.408838439850386 0.00626582857597616 -0.143666666666667 -0.545333333333333 7.16812493016719 31.7365511173465 -0.143666666666667 -0.545333333333333 0.191949730625839 0.000670416799235703 -1.49041169414944 -6.96648109236176 O14818 PSMA7 O14818.S11.p_PSMA7 O14818_S11s _1_1_11_11 O14818 Q8TAA3-5|O14818|Q8TAA3-2|O14818-4|F5GY34 Proteasome subunit alpha type-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27176.27176.5 24.97 24.97 2.454 3 1 1 0 669.7633 3264.8236 S11s TMT10 6 (R) AITVFsPDGHLFQVEYAQEAVKK (G) AIT(0.0)VFS(0.99)PDGHLFQVEY(0.0)AQEAVKK K:TMT10,s:Phosphorylated S PSMA7 28057.5 4 1 2979.1 64.18 HUMAN 1 -7.1681 -31.7366 DRATGGWSSSKKRPR-p Q8TBE0;S165-p DRATGGWSSSKKRPR 0.824903873569325 0.00112006726578317 -0.0506666666666667 -1.24366666666667 1.6125533985214 49.4413715173302 -0.0506666666666667 -1.24366666666667 0.689834102327011 1.13726807582687e-05 -0.421180583475876 -15.3172434050098 Q8TBE0 BAHD1 Q8TBE0.S165.p_BAHD1 Q8TBE0_S165s _1_1_165_165 Q8TBE0 Q8TBE0|Q8TBE0-2|Q8TBE0-3 Bromo adjacent homology domain-containing 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11350.11350.2 13.05 13.05 1.125 4 1 1 0 709.857 1338.7418 S165s TMT10 160 (R) ATGGWsSSK (K) AT(0.0)GGWS(0.99)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S BAHD1 85848.7 2 4 636.1 256.1 HUMAN 1 -1.6126 -49.4414 DRDESEVSDEGGSPI-p O14976;S829-p DRDESEVSDEGGSPI 0.485069507227704 0.0263581786161247 -0.175666666666667 0.879 5.78978542983112 21.4533287481289 -0.175666666666667 0.879 0.263646164123239 0.00715594716230508 -1.24702359549505 4.19373318459264 O14976 GAK O14976.S829.p_GAK O14976_S829s_1_1_829_829 O14976 O14976|O14976-2 Cyclin-G-associated kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11262.11262.3 12.5 12.5 1.659 7 1 1 0 1221.8497 3567.5714 M820m S829s TMT10 814 (K) ESESALmEDRDESEVsDEGGSPISSEGQEPR (A) ES(0.0)ES(0.0)ALM(1.0)EDRDES(0.0)EVS(0.99)DEGGS(0.0)PIS(0.0)S(0.0)EGQEPR m:Oxidized methionine,s:Phosphorylated S GAK 144671.4 3 6 746.1 233.2 HUMAN 1 -5.7898 21.4533 DRDREDRSKDRDRER-p O43143;S37-p DRDREDRSKDRDRER 0.530763566971729 0.00439771247042566 -0.264 -1.108 5.09013890828161 34.6344075496731 -0.264 -1.108 0.309732023042123 0.000344000635621461 -1.1205511688341 -7.96059143589171 O43143 DHX15 O43143.S37.p_DHX15 O43143_S37s _1_1_37_37 O43143 O43143 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.0018.0018.5 9.45 4.37 99 1 1 1 0 409.2 1962.0063 S37s Hydrogen 32 (R) DREDRsKDRDRER (D) DREDRS(1.0)KDRDRER K:TMT10-Lys-Only,s:Phosphorylated S DHX15 91730 1 1 3048.1 62.17 HUMAN 1 -5.0901 -34.6344 DRDSKRDSLEEGELR-p P21127;S47-p DRDSKRDSLEEGELR 0.992821359885708 0.50437872452724 0.00299999999999998 -0.374666666666667 0.0660965652347827 3.98289185305952 0.00299999999999998 -0.374666666666667 0.984895931608803 0.399678525686594 0.0198217596596992 -0.913703687617702 P21127 CDK11B P21127.S47.p_CDK11B P21127_S47s _1_1_47_47 P21127 P21127|J3QR44|A0A0D9SEN2|P21127-9|J3QR29|P21127-6|A0A087X1I0|A0A087WYI9 Cyclin-dependent kinase 11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5086.5086.4 12.1 8.58 99 1 1 1 0 480.9838 1840.9463 S47s TMT10 45 (K) RDsLEEGELRDHR (M) RDS(1.0)LEEGELRDHR s:Phosphorylated S CDK11B 92876.5 2 1 421.1 320.22 HUMAN 1 0.0661 -3.9829 DRDTYRRSAVPPGAD-p P46783;S130-p DRDTYRRSAVPPGAD 0.199491667548089 0.099281067613405 -0.313333333333333 -0.342333333333333 13.6153386773342 13.2559511205255 -0.313333333333333 -0.342333333333333 0.0434976838362178 0.0472503345635232 -2.6225613296451 -2.55585642847044 P46783 RPS10 P46783.S130.p_RPS10 P46783_S130s _1_1_130_130 P46783 A0A1W2PQS6|F6U211|P46783 40S ribosomal protein S10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9027.9027.2 11.97 7.28 99 1 1 1 0 690.3707 1299.7673 S130s TMT10 130 (R) sAVPPGADK (K) S(1.0)AVPPGADK K:TMT10,s:Phosphorylated S RPS10 18897.4 4 3 2425.1 84.06 HUMAN 1 -13.6153 -13.256 DRDYYSRSYRGGGGG-p P62995;S239-p DRDYYSRSYRGGGGG 0.139705665321453 0.0102907900139851 -0.792666666666667 -0.878 17.4900374689513 27.9053242655529 -0.792666666666667 -0.878 0.0178236338996162 0.0016198230454581 -3.35978394424575 -5.81090332720635 P62995 TRA2B P62995.S239.p_TRA2B P62995_S239s _1_1_239_239 P62995 P62995|P62995-3 Transformer-2 protein homolog beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5406.5406.3 14.11 8.58 4.777 2 1 1 0 511.5706 1452.7294 S239s TMT10 239 (R) sYRGGGGGGGGWR (A) S(0.99)Y(0.0)RGGGGGGGGWR s:Phosphorylated S TRA2B 33779.2 2 105 8.3 1346.57 HUMAN 1 -17.49 -27.9053 DREEIQMSNMGSNTK-p O60716-3;S891-p DREEIQMSNMGSNTK 0.88891351182718 0.160738624980576 0.0236666666666667 0.221 0.997546238006473 10.4428168003336 0.0236666666666667 0.221 0.794777156650741 0.0903063563709592 0.273262813771119 2.05788491347962 O60716 CTNND1 O60716.3.S891.p_CTNND1 O60716-3_S891s _1_1_891_891 O60716-3 O60716|O60716-2|O60716-3|C9JZR2|O60716-29 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10874.10874.4 11.67 8.89 2.909 4 1 1 0 823.6786 3211.7221 S891s TMT10 879 (K) SDKKPDREEIQMsNMGSNTK (S) S(0.0)DKKPDREEIQMS(0.99)NMGS(0.0)NT(0.0)K K:TMT10,s:Phosphorylated S CTNND1 105545.3 1 36 21.1 1014.17 HUMAN 1 0.9975 10.4428 DREKNHGSSPEQVVR-p O43164;S308-p DREKNHGSSPEQVVR 0.625010568942101 0.11219674479053 0.068 -0.208 3.79252290982694 12.5346022674188 0.068 -0.208 0.417587710510634 0.0557878691063818 0.877256454160545 -2.42625849856178 O43164 PJA2 O43164.S308.p_PJA2 O43164_S308sS309s_2_2_308_309 O43164 O43164|O43164-2 E3 ubiquitin-protein ligase Praja-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7273.7273.3 7.43 7.43 99 2 2 2 0 685.0059 1893.0707 S308s S309s TMT10 305 (K) NHGssPEQVVRPK (V) NHGS(1.0)S(1.0)PEQVVRPK K:TMT10,s:Phosphorylated S PJA2 79239.7 1 5 2853.1 68.06 HUMAN 1 3.7925 -12.5346 DRELGIRSSKSAEDL-p Q8N2F6-2;S42-p DRELGIRSSKSAEDL 0.0948633510902073 0.0191035012234359 0.335 0.377 21.7527876534779 23.6378439256985 0.335 0.377 0.00667915058003505 0.00432728607762126 4.26562593910654 4.70139724468651 Q8N2F6 ARMC10 Q8N2F6.2.S42.p_ARMC10 Q8N2F6-2_S42s _1_1_42_42 Q8N2F6-2 Q8N2F6-2|Q8N2F6-5|Q8N2F6-4|Q8N2F6-6 Isoform 2 of Armadillo repeat-containing protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21860.21860.3 15.69 15.69 1.124 6 1 1 0 1127.5692 3300.705 S42s TMT10 42 (R) sSKSAEDLTDGSYDDVLNAEQLQK (L) S(0.99)S(0.0)KS(0.0)AEDLT(0.0)DGS(0.0)Y(0.0)DDVLNAEQLQK K:TMT10,s:Phosphorylated S ARMC10 34134.7 6 1 3044.1 62.25 HUMAN 1 21.7528 23.6378 DRENSDDTEEEEEEV-p Q9Y2D9;T103-p DRENSDDTEEEEEEV 0.311737507958546 0.0540543139764796 0.149333333333333 0.357 9.46982700999417 16.8925756843714 0.149333333333333 0.357 0.112984091807546 0.0204523130499862 1.88972926360704 3.23905783997102 Q9Y2D9 ZNF652 Q9Y2D9.T103.p_ZNF652 Q9Y2D9_S100sT103t_2_2_100_103 Q9Y2D9 Q9Y2D9|D6RF85 Zinc finger protein 652 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11816.11816.5 13.28 13.28 5.48 5 2 2 0 849.1946 4082.0041 S100s T103t TMT10 86 (R) AVSDVHAVKEDRENsDDtEEEEEEVSYKR (E) AVS(0.0)DVHAVKEDRENS(0.99)DDT(0.99)EEEEEEVS(0.0)Y(0.0)KR K:TMT10,s:Phosphorylated S,t:Phosphorylated T ZNF652 71055.1 5 6 1862.1 110.65 HUMAN 1 9.4698 16.8926 DREPHGYSPERLRGE-p Q9HCM7;S937-p DREPHGYSPERLRGE 0.684799668184202 0.283903442885454 -0.115 -0.237666666666667 3.08480676465953 7.21116973819936 -0.115 -0.237666666666667 0.49149524834237 0.190056630831721 -0.737585493029151 -1.49750277109893 Q9HCM7 FBRSL1 Q9HCM7.S937.p_FBRSL1 Q9HCM7_S937s _1_1_937_937 Q9HCM7 Q9HCM7 Fibrosin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17028.17028.5 17.56 9.26 2.383 4 1 1 0 797.2002 3901.9935 S937s TMT10 907 (R) AFPAAAPAPGSAALLEPPERPYRDREPHGYsPER (L) AFPAAAPAPGS(0.0)AALLEPPERPY(0.0)RDREPHGY(0.0)S(0.99)PER s:Phosphorylated S FBRSL1 111247 4 9 716.1 237.81 HUMAN 1 -3.0848 -7.2112 DREQPHWT_______-p Q9BWN1;T585-p DREQPHWT_______ 0.918221647629323 0.573763212763696 0.028 0.056 0.723510315443034 3.25295205517167 0.028 0.056 0.846542893844677 0.472829750383801 0.203009555862229 0.771224080644751 Q9BWN1 PRR14 Q9BWN1.T585.p_PRR14 Q9BWN1_T585t _1_1_585_585 Q9BWN1 Q9BWN1 Proline-rich protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.34705.34705.3 9.19 9.19 9.187 2 1 1 0 992.1525 2894.4621 T585t TMT10 564 (R) LEELDALLLEEETVDREQPHWt (-) LEELDALLLEEET(0.0)VDREQPHWT(0.99) t:Phosphorylated T PRR14 64726.7 1 12 874.1 209.43 HUMAN 1 0.7235 3.253 DREVSEISIVDIANK-p Q14789-2;S533-p DREVSEISIVDIANK 0.843942307663143 0.0114133320159853 0.07 -0.709666666666667 1.4255384751291 27.1909719317284 0.07 -0.709666666666667 0.720188450630648 0.00190942588972745 0.377458867064626 -5.61313602832165 Q14789 GOLGB1 Q14789.2.S533.p_GOLGB1 Q14789-2_S533s _1_1_533_533 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18938.18938.4 8.95 7.05 1.112 3 1 1 0 685.8627 2660.4619 S533s TMT10 522 (R) TGEADREVSEIsIVDIANKR (S) T(0.0)GEADREVS(0.0)EIS(0.99)IVDIANKR K:TMT10,s:Phosphorylated S GOLGB1 378557.2 1 7 93.1 610.98 HUMAN 1 1.4255 -27.191 DREVVIGTPTLKQRK-p Q9BVQ7;T368-p DREVVIGTPTLKQRK 0.995010386084919 0.523059667241278 0.001 0.112666666666667 0.0444321501585295 3.78137432632252 0.001 0.112666666666667 0.989821276775361 0.418661058722856 0.0133574382664979 0.874959087576342 Q9BVQ7 SPATA5L1 Q9BVQ7.T368.p_SPATA5L1 Q9BVQ7_T368t _1_1_368_368 Q9BVQ7 Q9BVQ7|Q9BVQ7-2 Spermatogenesis-associated protein 5-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21362.21362.3 10.66 10.66 3.715 2 1 1 0 532.3123 1514.9558 T368t TMT10 363 (R) EVVIGtPTLK (Q) EVVIGT(0.99)PT(0.0)LK K:TMT10,t:Phosphorylated T SPATA5L1 81564.7 2 2 4370.1 32.6 HUMAN 1 0.0444 3.7814 DRFRRSETPPHWRQE-p Q13427;T358-p DRFRRSETPPHWRQE 0.195954837597201 0.0174550115138891 0.242 0.386 13.7927914998208 24.2314641538975 0.242 0.386 0.0417561885542304 0.00377444919997369 2.65495289521096 4.84591951298524 Q13427 PPIG Q13427.T358.p_PPIG Q13427_T358t _1_1_358_358 Q13427 Q13427|E9PG73 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5602.5602.5 15.1 12.17 1.168 2 1 1 0 430.2095 2067.0504 T358t TMT10 355 (R) RSEtPPHWRQEMQR (A) RS(0.0)ET(0.99)PPHWRQEMQR t:Phosphorylated T PPIG 89129.1 14 3 112.1 571.91 HUMAN 1 13.7928 24.2315 DRGEDVPSEEEEEEE-p Q9ULX3;S184-p DRGEDVPSEEEEEEE 0.279160113430845 0.299969589928628 0.211 -0.161666666666667 10.4765691467371 6.90273543098337 0.211 -0.161666666666667 0.0896072368094847 0.204045234815574 2.064642311199 -1.44358330690754 Q9ULX3 NOB1 Q9ULX3.S184.p_NOB1 Q9ULX3_S184s _1_1_184_184 Q9ULX3 Q9ULX3 RNA-binding protein NOB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32386.32386.4 15.14 15.14 99 1 1 1 0 1136.7695 4464.08 S184s TMT10 162 (R) NPLPNIDHELQELLIDRGEDVPsEEEEEEENGFEDR (K) NPLPNIDHELQELLIDRGEDVPS(1.0)EEEEEEENGFEDR s:Phosphorylated S NOB1 47073.5 1 1 2602.1 77.05 HUMAN 1 10.4766 -6.9027 DRGEFSASPMLKSGM-p Q9UQ35;S1124-p DRGEFSASPMLKSGM 0.366283504181518 0.263107531053487 0.166666666666667 0.233666666666667 8.09737017410759 7.63984146801863 0.166666666666667 0.233666666666667 0.154975477301834 0.172193143008329 1.6520476283513 1.57213810802486 Q9UQ35 SRRM2 Q9UQ35.S1124.p_SRRM2 Q9UQ35_S1124s _1_1_1124_1124 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15229.15229.3 17.86 12.2 3.025 2 1 1 0 668.6733 1924.0363 S1124s TMT10 1116 (R) QDRGEFSAsPMLK (S) QDRGEFS(0.0)AS(0.99)PMLK K:TMT10,s:Phosphorylated S SRRM2 300351.7 24 61 2.1 3310.34 HUMAN 1 8.0974 7.6398 DRGKKSRSPVDLRGK-p Q13523;S294-p DRGKKSRSPVDLRGK 0.574624647827699 0.00995309608398391 0.0843333333333333 0.445666666666667 4.42772895673461 28.1396924672945 0.0843333333333333 0.445666666666667 0.360767248652181 0.00153472565597899 0.998057145427305 5.87692757866692 Q13523 PRPF4B Q13523.S294.p_PRPF4B Q13523_S294s _1_1_294_294 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5668.5668.2 8.74 1.6 1.402 2 1 1 0 619.8266 1158.6792 S294s TMT10 292 (K) SRsPVDLR (G) S(0.0)RS(0.99)PVDLR s:Phosphorylated S PRPF4B 117327.1 13 13 70.1 666.55 HUMAN 1 4.4277 28.1397 DRGKRCPTPEIQKKS-p P40818;T577-p DRGKRCPTPEIQKKS 0.709478018853833 0.505724066791871 0.072 0.0773333333333333 2.80295235488876 3.9679033160766 0.072 0.0773333333333333 0.524450814838903 0.401060294510212 0.680097421877385 0.910835949602631 P40818 USP8 P40818.T577.p_USP8 P40818_T577t _1_1_577_577 P40818 P40818|P40818-2 Ubiquitin carboxyl-terminal hydrolase 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7767.7767.3 12.29 5.83 99 1 1 1 0 546.9615 1558.9027 T577t Hydrogen 575 (R) CPtPEIQKK (S) CPT(1.0)PEIQKK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T USP8 128490.8 19 6 788.1 224.97 HUMAN 1 2.803 3.9679 DRGPRPGSPSALLPG-p Q9UJJ7;S271-p DRGPRPGSPSALLPG 0.148266672319898 0.0617473860503252 -0.252666666666667 -0.299666666666667 16.7437909538565 16.1006827500119 -0.252666666666667 -0.299666666666667 0.0211651282593022 0.0245432304368328 -3.21234114152099 -3.08534924253983 Q9UJJ7 RPUSD1 Q9UJJ7.S271.p_RPUSD1 Q9UJJ7_S271s _1_1_271_271 Q9UJJ7 Q9UJJ7|H3BQN8 RNA pseudouridylate synthase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14985.14985.5 18.72 13.86 2.302 5 1 1 0 954.8926 4690.4742 S271s TMT10 256 (R) ATPDPDPEDRGPRPGsPSALLPGPGRPPPPPTKPPETEAQR (G) AT(0.0)PDPDPEDRGPRPGS(0.99)PS(0.0)ALLPGPGRPPPPPT(0.0)KPPET(0.0)EAQR K:TMT10,s:Phosphorylated S RPUSD1 35382.5 1 1 5504.1 18.72 HUMAN 1 -16.7438 -16.1007 DRGQGDSSEEAPKQD-p O60279;S241-p DRGQGDSSEEAPKQD 0.989051104038883 0.0669749232046015 0.00433333333333333 -0.472666666666667 0.0970646894118059 15.6169598800416 0.00433333333333333 -0.472666666666667 0.977897939541773 0.0274349398269962 0.0290081135922011 -2.99293095878147 O60279 SUSD5 O60279.S241.p_SUSD5 O60279_S240sS241s_2_2_240_241 O60279 O60279 Sushi domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3115.3115.3 7.38 7.38 7.383 3 2 2 0 903.7017 2549.1549 S240s S241s Hydrogen 229 (R) TEADEDRGQGDssEEAPKQDR (L) T(0.0)EADEDRGQGDS(0.99)S(0.99)EEAPKQDR K:TMT10-Lys-Only,s:Phosphorylated S SUSD5 68818.7 1 1 7175.1 7.38 HUMAN 1 0.0971 -15.617 DRGRDRHSPPGCHLF-p Q12873-3;S66-p DRGRDRHSPPGCHLF 0.362826680057782 0.623207348563839 0.132333333333333 0.0663333333333334 8.18118206248123 2.79227958082943 0.132333333333333 0.0663333333333334 0.152013372350718 0.52574123612042 1.66657704200405 0.677805219881862 Q12873 CHD3 Q12873.3.S66.p_CHD3 Q12873-3_S66s _1_1_66_66 Q12873-3 Q12873-3 Isoform 3 of Chromodomain-helicase-DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21479.21479.5 29.25 28.55 99 1 1 1 0 847.6315 4154.1636 S66s Hydrogen 63 (R) DRHsPPGCHLFPPPPPPPPPLPPPPPPPPPDKDDIR (L) DRHS(1.0)PPGCHLFPPPPPPPPPLPPPPPPPPPDKDDIR C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S CHD3 234573.2 3 39 49.3 753.68 HUMAN 1 8.1812 2.7923 DRGRTTHSPYEERSR-p Q8NDT2;S609-p DRGRTTHSPYEERSR 0.235639318763897 0.301368477994011 0.189666666666667 0.115 12.021586549847 6.87617091310822 0.189666666666667 0.115 0.0627828960571419 0.205297144464595 2.33616400874802 1.43892918413202 Q8NDT2 RBM15B Q8NDT2.S609.p_RBM15B Q8NDT2_S609s _1_1_609_609 Q8NDT2 Q8NDT2|Q8NDT2-2 Putative RNA-binding protein 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4131.4131.3 12.29 12.29 3.5 4 1 1 0 476.884 1348.6695 S609s TMT10 606 (R) TTHsPYEER (S) T(0.0)T(0.0)HS(0.99)PY(0.0)EER s:Phosphorylated S RBM15B 97489 5 15 199.1 454.11 HUMAN 1 12.0216 6.8762 DRGVNTFSPEGRLFQ-p P28066;S16-p DRGVNTFSPEGRLFQ 0.539574936582041 0.527964619171701 -0.130666666666667 -0.129333333333333 4.95014722663218 3.72888715133243 -0.130666666666667 -0.129333333333333 0.319878666839395 0.423751535450723 -1.09491434173285 -0.864798587851351 P28066 PSMA5 P28066.S16.p_PSMA5 P28066_S16s _1_1_16_16 P28066 P28066 Proteasome subunit alpha type-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10117.10117.2 11.75 11.75 2.379 2 1 1 0 686.8272 1292.6796 S16s TMT10 11 (R) GVNTFsPEGR (L) GVNT(0.0)FS(0.99)PEGR s:Phosphorylated S PSMA5 26581.7 2 1 4356.1 32.81 HUMAN 1 -4.9501 -3.7289 DRGYDRGYDDRDYYS-p P62995;Y230-p DRGYDRGYDDRDYYS 0.800969055659251 0.0171552825204013 -0.0923333333333333 -0.386333333333333 1.85538970199412 24.3571280775979 -0.0923333333333334 -0.386333333333333 0.652320504217829 0.00366679974300974 -0.476533434015833 -4.87689422570042 P62995 TRA2B P62995.Y230.p_TRA2B P62995_Y230y _1_1_230_230 P62995 P62995|P62995-3 Transformer-2 protein homolog beta GG20160819_MSz_CCLE_T4D7_pY_Injection_01.7524.7571.3 13.13 13.13 2.326 5 1 1 0 703.9671 2029.9201 Y230y TMT10 225 (R) GYDRGyDDRDYYSR (S) GY(0.0)DRGY(0.99)DDRDY(0.0)Y(0.0)S(0.0)R y:Phosphorylated Y TRA2B 33779.2 2 1 45.1 47.41 HUMAN 1 -1.8554 -24.3571 DRIISVNSVDLRAAS-p Q12959-2;S517-p DRIISVNSVDLRAAS 0.0217780195589434 0.698611546022269 -0.848333333333333 0.0506666666666667 38.7605224007777 2.14106051418973 -0.848333333333333 0.0506666666666667 0.000133029439093386 0.610792855709953 -9.6089064536943 0.53975481586165 Q12959 DLG1 Q12959.2.S517.p_DLG1 Q12959-2_S517s _1_1_517_517 Q12959-2 Q12959-2|Q12959-7|Q12959-4|A0A0C4DFT3|Q12959-6|Q12959-3|Q12959-5|Q12959-9|Q12959-8|E7EQD7 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22456.22456.2 13.82 5.95 3.291 2 1 1 0 712.8893 1344.8048 S517s TMT10 512 (R) IISVNsVDLR (A) IIS(0.0)VNS(0.99)VDLR s:Phosphorylated S DLG1 103604.4 2 15 196.1 460.79 HUMAN 1 -38.7605 2.1411 DRIMNTFSVVPSPKV-p P07437;S168-p DRIMNTFSVVPSPKV 0.89801806103268 0.0546957890003969 -0.03 0.357666666666667 0.915461600286852 16.8219191876852 -0.03 0.357666666666667 0.809941850496693 0.0207877785284158 -0.252536326569577 3.22521659800331 P07437 TUBB P07437.S168.p_TUBB P07437_S168s _1_1_168_168 P07437 A0A0B4J269|Q13509|P68371|P07437|P04350|Q5JP53|Q13509-2|Q5ST81 Tubulin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26368.26368.3 13.94 13.94 3.648 3 1 1 0 620.0044 1778.0286 S168s TMT10 163 (R) IMNTFsVVPSPK (V) IMNT(0.0)FS(0.99)VVPS(0.0)PK K:TMT10,s:Phosphorylated S TUBB 50126.4 3 11 333.1 357.15 HUMAN 1 -0.9155 16.8219 DRKDKKRSYESANGR-p Q9Y383;S370-p DRKDKKRSYESANGR 0.513801353921322 0.0614122223486768 -0.178333333333333 -0.274666666666667 5.34321476560761 16.134335568129 -0.178333333333333 -0.274666666666667 0.292198864182869 0.0243537836264739 -1.16659862755945 -3.09181934326114 Q9Y383 LUC7L2 Q9Y383.S370.p_LUC7L2 Q9Y383_S370s _1_1_370_370 Q9Y383 Q96HJ9-2|Q9Y383 Putative RNA-binding protein Luc7-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.3438.3438.4 9.8 9.8 9.798 3 1 1 0 427.2258 1625.9124 S370s TMT10 368 (K) KRsYESANGR (S) KRS(0.99)Y(0.0)ES(0.0)ANGR K:TMT10,s:Phosphorylated S LUC7L2 46969.6 1 3 2533.1 79.6 HUMAN 1 -5.3432 -16.1343 DRKDRSKSKESARDP-p Q9BTC0;S2217-p DRKDRSKSKESARDP 0.133604134707759 0.0155266563439339 -0.556666666666667 0.434666666666667 17.9951604788962 25.0080261362307 -0.556666666666667 0.434666666666667 0.0158666028818219 0.00315643889551006 -3.46128593299396 5.03951725277691 Q9BTC0 DIDO1 Q9BTC0.S2217.p_DIDO1 Q9BTC0_S2217s _1_1_2217_2217 Q9BTC0 Q9BTC0 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4044.4044.4 8.64 3.12 1.418 3 1 1 0 582.0695 2245.2868 S2217s TMT10 2217 (K) sKESARDPKPEASR (A) S(0.99)KES(0.0)ARDPKPEAS(0.0)R K:TMT10,s:Phosphorylated S DIDO1 245579.9 4 25 153.1 505.54 HUMAN 1 -17.9952 25.008 DRKKFHSSDSEEEEH-p Q96ST2;S363-p DRKKFHSSDSEEEEH 0.375377347252214 0.0566240761044654 -0.2085 0.2585 7.87330259739106 16.6187463160991 -0.2085 0.2585 0.163181056372498 0.0217833850559606 -1.61317405939045 3.18555660976225 Q96ST2 IWS1 Q96ST2.S363.p_IWS1 Q96ST2_S363sS365s_2_2_363_365 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6071.6071.4 8.21 8.21 1.202 3 2 2 0 699.0968 2633.4341 S363s S365s TMT10 359 (K) KFHSsDsEEEEHKK (Q) KFHS(0.0)S(0.99)DS(0.99)EEEEHKK K:TMT10,s:Phosphorylated S IWS1 92010 20 15 230.1 422.87 HUMAN 2 -7.8733 16.6187 DRKRSRKSPSPGRRN-p Q9HCG8;S91-p DRKRSRKSPSPGRRN 0.930700890442808 0.191592734526852 -0.016 0.2 0.619599978967419 9.43689283812195 -0.016 0.2 0.86704173377424 0.11384414930186 -0.175534075716427 1.883308579831 Q9HCG8 CWC22 Q9HCG8.S91.p_CWC22 Q9HCG8_S91sS93s_2_2_91_93 Q9HCG8 Q9HCG8 Pre-mRNA-splicing factor CWC22 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3234.3234.3 7.73 4.43 1.895 3 2 2 0 454.2164 1200.701 S91s S93s Hydrogen 88 (R) SRKsPsPGR (R) S(0.0)RKS(0.99)PS(0.99)PGR K:TMT10-Lys-Only,s:Phosphorylated S CWC22 106034.9 19 8 1128.1 174.64 HUMAN 1 -0.6196 9.4369 DRKRSSLSPGRGKDF-p Q9BUQ8;S109-p DRKRSSLSPGRGKDF 0.161340755475352 0.116713822998717 0.230333333333333 0.177333333333333 15.8589633088148 12.3036168544645 0.230333333333333 0.177333333333333 0.0259479868472136 0.0588353463724443 3.04115635505097 2.38508076513833 Q9BUQ8 DDX23 Q9BUQ8.S109.p_DDX23 Q9BUQ8_S109s _1_1_109_109 Q9BUQ8 Q9BUQ8 Probable ATP-dependent RNA helicase DDX23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6033.6240.3 10.23 5.68 2.387 3 1 1 0 476.2654 1346.8156 S109s TMT10 106 (R) SSLsPGRGK (D) S(0.0)S(0.0)LS(0.99)PGRGK K:TMT10,s:Phosphorylated S DDX23 95923.1 10 79 121.5 549.41 HUMAN 1 15.859 12.3036 DRKVKAKSIVFHRKK-p B5MDF5;S152-p DRKVKAKSIVFHRKK 0.215031895629254 0.0760892956053193 -0.252666666666667 -0.266333333333333 12.8658466429314 14.847236218941 -0.252666666666667 -0.266333333333333 0.0516910478133406 0.0327549075592585 -2.48692107686962 -2.84801372627783 B5MDF5 NotFound B5MDF5.S152.p_NotFound B5MDF5_S152s _1_1_152_152 B5MDF5 B5MDF5|P62826|B4DV51 GTP-binding nuclear protein Ran HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10926.10926.2 11.31 11.31 99 1 1 1 0 748.431 1415.8887 S152s TMT10 150 (K) AKsIVFHR (K) AKS(1.0)IVFHR K:TMT10,s:Phosphorylated S RAN 26394.9 4 3 4221.1 35.16 HUMAN 1 -12.8658 -14.8472 DRLEGDRSEGSGQEN-p Q58WW2-3;S938-p DRLEGDRSEGSGQEN 0.39120743112417 0.904368351899914 0.133666666666667 0.0273333333333334 7.51821760106189 0.608535706093346 0.133666666666667 0.0273333333333333 0.177083558229763 0.869253462710909 1.55145367590227 0.172563097243664 Q58WW2 DCAF6 Q58WW2.3.S938.p_DCAF6 Q58WW2-3_S938sS941s_2_2_938_941 Q58WW2-3 Q58WW2-3|Q58WW2-4|Q58WW2-2 Isoform 3 of DDB1- and CUL4-associated factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6252.6455.3 8.01 8.01 99 2 2 2 0 952.0333 2694.156 S938s S941s TMT10 930 (R) ADRLEGDRsEGsGQENENEDEE (-) ADRLEGDRS(1.0)EGS(1.0)GQENENEDEE s:Phosphorylated S DCAF6 107567.4 1 6 2596.1 77.25 HUMAN 1 7.5182 0.6085 DRLLGLGSASGSVGR-p Q9BU76;S123-p DRLLGLGSASGSVGR 0.715960741537752 0.12373042575624 0.052 0.328 2.73751851327544 11.972256740259 0.052 0.328 0.532412383988897 0.0635000878282886 0.666575783035597 2.32625712717323 Q9BU76 C1orf35 Q9BU76.S123.p_C1orf35 Q9BU76_S123s _1_1_123_123 Q9BU76 Q9BU76|Q9BU76-4|Q9BU76-3 Multiple myeloma tumor-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21159.21159.2 9.71 4.51 1.123 3 1 1 0 741.8964 1402.8215 S123s TMT10 118 (R) LLGLGsASGSVGR (V) LLGLGS(0.99)AS(0.0)GS(0.0)VGR s:Phosphorylated S MMTAG2 29696.6 1 1 2785.1 70.71 HUMAN 1 2.7375 11.9723 DRLNEQASEEILKVE-p Q01105-2;S50-p DRLNEQASEEILKVE 0.189388000089707 0.00641872087265848 -0.261666666666667 0.775666666666667 14.15191454279 31.5333145875341 -0.261666666666667 0.775666666666667 0.0384422276058301 0.000702535931378409 -2.72085311424274 6.90086628266912 Q01105 SET Q01105.2.S50.p_SET Q01105-2_S50s _1_1_50_50 Q01105-2 Q01105|Q01105-2|Q01105-4 Isoform 2 of Protein SET HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29554.29554.5 23.87 19.19 99 1 1 1 0 941.089 4621.42 S50s TMT10 27 (K) EQQEAIEHIDEVQNEIDRLNEQAsEEILKVEQK (Y) EQQEAIEHIDEVQNEIDRLNEQAS(1.0)EEILKVEQK K:TMT10,s:Phosphorylated S SET 32102.4 5 5 1479.1 138.77 HUMAN 1 -14.1519 31.5333 DRLNKVISELNGKNI-p P05387;S44-p DRLNKVISELNGKNI 0.224262912799076 0.757766604238718 -0.400666666666667 0.0313333333333333 12.4749300859115 1.66344546361187 -0.400666666666667 0.0313333333333334 0.0565596862171634 0.681797577245873 -2.41686845876324 0.432861442952086 P05387 RPLP2 P05387.S44.p_RPLP2 P05387_S44s _1_1_44_44 P05387 P05387 60S acidic ribosomal protein P2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19061.19061.2 9.79 3.42 99 1 1 1 0 699.3945 1317.8142 S44s TMT10 42 (K) VIsELNGK (N) VIS(1.0)ELNGK K:TMT10,s:Phosphorylated S RPLP2 11664.7 1 7 1134.1 173.84 HUMAN 1 -12.4749 1.6634 DRLPKTRSMDDLLSA-p Q9NYA4;S610-p DRLPKTRSMDDLLSA 0.264910169118696 0.247806143409771 -0.165 -0.113 10.9407106515453 7.98268550581435 -0.165 -0.11296080530197 0.0805246665034984 0.15912244723058 -2.14572553822674 -1.63164086608594 Q9NYA4 MTMR4 Q9NYA4.S610.p_MTMR4 Q9NYA4_S610s _1_1_610_610 Q9NYA4 Q9NYA4|J3QR65 Myotubularin-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24137.24137.3 15.35 15.35 7.93 6 1 1 0 726.6591 2097.9994 S610s TMT10 610 (R) sMDDLLSACDTSSPLTR (T) S(0.99)MDDLLS(0.0)ACDT(0.0)S(0.0)S(0.0)PLT(0.0)R C:Carbamidomethylation,s:Phosphorylated S MTMR4 136374.8 3 3 1690.1 120.8 HUMAN 1 -10.9407 -7.9827 DRLRDPDSHIVKKIN-p A0A1B0GUA3;S525-p DRLRDPDSHIVKKIN 0.278565796765363 0.59966838447944 -0.230333333333333 -0.0606666666666666 10.4999226317916 3.00970172436491 -0.230333333333333 -0.0606666666666667 0.0891266815632856 0.500068878779767 -2.06871398325756 -0.722280576955453 A0A1B0GUA3 NotFound A0A1B0GUA3.S525.p_NotFound A0A1B0GUA3_S525s _1_1_525_525 A0A1B0GUA3 A0A1B0GUA3|Q96EK5 KIF1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14922.14922.4 11.68 11.68 99 1 1 1 0 586.5781 2263.3287 S525s TMT10 514 (K) VAIADRLRDPDsHIVK (K) VAIADRLRDPDS(1.0)HIVK K:TMT10,s:Phosphorylated S KIF1BP 75466.9 6 4 2127.1 96.61 HUMAN 1 -10.4999 -3.0097 DRLSTEGSDQEKEDD-p P19021-5;S947-p DRLSTEGSDQEKEDD 0.301590454921122 0.427028106063986 -0.212666666666667 -0.284 9.76880557406787 4.91917907653134 -0.212666666666667 -0.284 0.105467692085679 0.322167771011735 -1.9415706358448 -1.08900912916253 P19021 PAM P19021.5.S947.p_PAM P19021-5_S947s _1_1_947_947 P19021-5 P19021-5|P19021-6 Isoform 5 of Peptidyl-glycine alpha-amidating monooxygenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9394.9394.2 7.32 7.32 1.21 3 1 1 0 816.4014 1551.8266 S947s TMT10 942 (R) LSTEGsDQEK (E) LS(0.0)T(0.0)EGS(0.99)DQEK K:TMT10,s:Phosphorylated S PAM 109257 1 2 6199.1 13.22 HUMAN 1 -9.7688 -4.9192 DRMHRQRSPTQSPPA-p Q86UR5-6;S1103-p DRMHRQRSPTQSPPA 0.233216939181417 0.122241979077937 0.201666666666667 0.189333333333333 12.1431013891553 12.0387111565164 0.201666666666667 0.19280859655864 0.0610505893970661 0.0625358251044703 2.35774276363822 2.3380317263579 Q86UR5 RIMS1 Q86UR5.6.S1103.p_RIMS1 Q86UR5-6_S1103s _1_1_1103_1103 Q86UR5-6 Q86UR5-4|Q86UR5-3|Q86UR5-5|Q86UR5-6|Q86UR5-7|Q86UR5-8 Isoform 6 of Regulating synaptic membrane exocytosis protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6714.6714.3 16.16 13.41 2.269 7 1 1 0 720.01 2078.0464 S1103s TMT10 1101 (R) QRsPTQSPPADTSFSSR (R) QRS(0.99)PT(0.0)QS(0.0)PPADT(0.0)S(0.0)FS(0.0)S(0.0)R s:Phosphorylated S RIMS1 154466.8 1 3 4944.1 24.81 HUMAN 1 12.1431 12.0387 DRMKIGASLADVDPM-p Q6PL18;S410-p DRMKIGASLADVDPM 0.274203367926357 0.0364493420928217 0.241333333333333 -0.291333333333333 10.6404296358255 19.350440788965 0.241333333333333 -0.291333333333333 0.0862893179847896 0.0116133073811912 2.0932285012529 -3.73756053248734 Q6PL18 ATAD2 Q6PL18.S410.p_ATAD2 Q6PL18_S410s _1_1_410_410 Q6PL18 Q6PL18 ATPase family AAA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28257.28257.3 16.89 16.89 12.972 3 1 1 0 728.3597 2103.0953 S410s TMT10 407 (K) IGAsLADVDPMQLDSSVR (F) IGAS(0.99)LADVDPMQLDS(0.0)S(0.0)VR s:Phosphorylated S ATAD2 159920.6 1 8 266.1 395.28 HUMAN 1 10.6404 -19.3504 DRMQKEITALAPSTM-p P63261;T318-p DRMQKEITALAPSTM 0.986635359460652 0.210462230336256 -0.00300000000000001 0.132 0.118848934772605 8.90391938561354 -0.00300000000000001 0.132 0.973005077364241 0.128708746714024 -0.0354327048529909 1.79109407332289 P63261 ACTG1 P63261.T318.p_ACTG1 P63261_T318t _1_1_318_318 P63261 P68133|P62736|P68032|P63267|P60709|P63261|P63267-2|A6NL76 Actin, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21557.21557.3 12.77 12.77 8.705 3 1 1 0 567.3084 1619.9443 T318t TMT10 316 (K) EItALAPSTMK (I) EIT(0.99)ALAPS(0.0)T(0.0)MK K:TMT10,t:Phosphorylated T ACTG1 42134.4 2 17 1233.1 163.71 HUMAN 1 -0.1188 8.9039 DRNRKTASPEDSDMP-p O95071;S1308-p DRNRKTASPEDSDMP 0.348968694979491 0.140659011866425 0.256333333333333 0.212333333333333 8.49622880757375 11.224500082484 0.256333333333333 0.212333333333333 0.141376465309601 0.0754310219697345 1.72115358898495 2.19447472915999 O95071 UBR5 O95071.S1308.p_UBR5 O95071_S1308s _1_1_1308_1308 O95071 O95071|O95071-2 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20956.20956.4 19.96 19.96 1.415 3 1 1 0 901.6934 3523.7892 S1308s TMT10 1305 (R) KTAsPEDSDMPDHDLEPPRFAQLALER (V) KT(0.0)AS(0.99)PEDS(0.0)DMPDHDLEPPRFAQLALER K:TMT10,s:Phosphorylated S UBR5 312542 3 14 80.1 636.57 HUMAN 1 8.4962 11.2245 DRNVIPDTPPSTPLV-p Q9UKA4;T1100-p DRNVIPDTPPSTPLV 0.408838439850386 0.0261702953704286 -0.114666666666667 -0.290333333333333 7.16698147062636 21.5095012875665 -0.114666666666667 -0.290333333333333 0.192000275971682 0.00706398667329477 -1.49021194856698 -4.20633623804296 Q9UKA4 AKAP11 Q9UKA4.T1100.p_AKAP11 Q9UKA4_T1100t _1_1_1100_1100 Q9UKA4 Q9UKA4 A-kinase anchor protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21856.22064.3 17.76 17.76 4.831 4 1 1 0 667.0201 1919.0799 T1100t TMT10 1095 (R) NVIPDtPPSTPLVPSR (A) NVIPDT(0.99)PPS(0.0)T(0.0)PLVPS(0.0)R t:Phosphorylated T AKAP11 213075.9 5 8 688.1 243.29 HUMAN 1 -7.167 -21.5095 DRPARRPSPTSGDSR-p Q8N1G1;S459-p DRPARRPSPTSGDSR 0.609174247956065 0.972829395980495 0.109 -0.011 3.98574844487986 0.169074145295997 0.109 -0.011 0.399415721747825 0.961817302439079 0.914404437729694 -0.0501252909546735 Q8N1G1 REXO1 Q8N1G1.S459.p_REXO1 Q8N1G1_S459s _1_1_459_459 Q8N1G1 Q8N1G1 RNA exonuclease 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3507.3507.4 15.52 10.21 1.178 4 1 1 0 455.9804 1740.9303 S459s TMT10 457 (R) RPsPTSGDSRPAAGR (G) RPS(0.99)PT(0.0)S(0.0)GDS(0.0)RPAAGR s:Phosphorylated S REXO1 132819.4 3 4 1940.1 106.1 HUMAN 1 3.9857 -0.1691 DRPGSPESPLLDAPF-p Q8TF72;S913-p DRPGSPESPLLDAPF 0.35440286195362 0.358534881271953 0.125666666666667 0.0983333333333334 8.37239631394845 5.90978938545031 0.125666666666667 0.0983333333333334 0.145465622100138 0.256460840621845 1.69970784508592 1.26817916030198 Q8TF72 SHROOM3 Q8TF72.S913.p_SHROOM3 Q8TF72_S913s _1_1_913_913 Q8TF72 Q8TF72 Protein Shroom3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18994.18994.3 8.61 8.61 1.975 3 1 1 0 717.3563 2070.0817 S913s TMT10 906 (R) DRPGSPEsPLLDAPFSR (A) DRPGS(0.0)PES(0.99)PLLDAPFS(0.0)R s:Phosphorylated S SHROOM3 218451.1 1 41 90.2 622.62 HUMAN 1 8.3724 5.9098 DRPHASGTDGDESEE-p Q96RS0;T407-p DRPHASGTDGDESEE 0.159393285726736 0.614604205436038 -0.349 -0.0583333333333333 15.9696529781306 2.87348153328167 -0.349 -0.0583333333333333 0.0252950010741545 0.516002548606543 -3.06236550488187 -0.694500554764858 Q96RS0 TGS1 Q96RS0.T407.p_TGS1 Q96RS0_S405sT407tS412s_3_3_405_412 Q96RS0 Q96RS0 Trimethylguanosine synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6750.6750.5 12.36 11.28 12.361 4 3 3 0 709.7112 3304.6285 S405s T407t S412s TMT10 400 (K) DRPHAsGtDGDEsEEDPPEHKPSK (L) DRPHAS(0.99)GT(0.99)DGDES(0.99)EEDPPEHKPS(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T TGS1 97473.9 2 12 1387.1 147.41 HUMAN 1 -15.9697 -2.8735 DRPKLFVTPPEGSSR-p Q14244-7;T299-p DRPKLFVTPPEGSSR 0.80064254088907 0.00690909018585545 -0.037 -0.614 1.85893599234694 30.9789537397174 -0.037 -0.614 0.651788060500739 0.000798186955592605 -0.477330717705003 -6.72447175960316 Q14244 MAP7 Q14244.7.T299.p_MAP7 Q14244-7_T299t _1_1_299_299 Q14244-7 A0A087WZ40|Q14244-7|Q14244-4|Q14244-6|Q14244-2|Q14244-3|Q14244-5 Isoform 7 of Ensconsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19531.19744.3 14.16 14.16 14.156 3 1 1 0 500.2551 1418.7841 T299t TMT10 296 (K) LFVtPPEGSSR (R) LFVT(0.99)PPEGS(0.0)S(0.0)R t:Phosphorylated T MAP7 87064.8 2 9 581.1 266.4 HUMAN 1 -1.8589 -30.979 DRPSLTVTPKRWKLR-p Q8TF76;T97-p DRPSLTVTPKRWKLR 0.385918333303081 0.00179932178180885 -0.165 -0.967333333333333 7.65438695428472 43.2248006256612 -0.165 -0.967333333333333 0.171617394640896 4.75904638145213e-05 -1.5751421063345 -11.6814480197278 Q8TF76 GSG2 Q8TF76.T97.p_GSG2 Q8TF76_T97t _1_1_97_97 Q8TF76 Q8TF76|Q8TF76-2 Serine/threonine-protein kinase haspin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10866.10866.3 8.99 2.5 1.898 3 1 1 0 551.3113 1571.9521 T97t TMT10 90 (K) DRPSLTVtPK (R) DRPS(0.0)LT(0.0)VT(0.99)PK K:TMT10,t:Phosphorylated T HASPIN 89692 2 2 2452.1 82.86 HUMAN 1 -7.6544 -43.2248 DRPVSQPSLVGSKEE-p Q9H4A3-7;S170-p DRPVSQPSLVGSKEE 0.0442361905650306 0.276142008854853 0.708666666666667 -0.345 30.123782725004 7.36325496627735 0.708666666666667 -0.345 0.000971900325330232 0.183516240351373 6.46987331004082 -1.52401793962522 Q9H4A3 WNK1 Q9H4A3.7.S170.p_WNK1 Q9H4A3-7_S170s _1_1_170_170 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10423.10423.4 10.53 10.53 2.211 3 1 1 0 671.8609 2604.451 S170s TMT10 163 (K) DRPVSQPsLVGSKEEPPPAR (S) DRPVS(0.0)QPS(0.99)LVGS(0.0)KEEPPPAR K:TMT10,s:Phosphorylated S WNK1 301202.7 1 5 162.1 495.27 HUMAN 1 30.1238 -7.3633 DRQAVRVSPCHSRQP-p Q674X7-3;S304-p DRQAVRVSPCHSRQP 0.665261908909664 0.473452883490253 0.063 0.0866666666666667 3.3106868183955 4.32828415623402 0.063 0.0866666666666667 0.466585585937927 0.369123405855691 0.782839763606563 0.979207936189152 Q674X7 KAZN Q674X7.3.S304.p_KAZN Q674X7-3_S304s _1_1_304_304 Q674X7-3 A0A1B0GWK2|Q674X7|Q674X7-2|Q674X7-5|Q674X7-3 Isoform 3 of Kazrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3800.3800.4 8.27 8.27 1.74 2 1 1 0 402.2025 1525.8219 S304s TMT10 299 (R) QAVRVsPCHSR (Q) QAVRVS(0.99)PCHS(0.0)R C:Carbamidomethylation,s:Phosphorylated S KAZN 46553.4 3 2 3086.1 61.12 HUMAN 1 3.3107 4.3283 DRQHREPSEQEHRRA-p Q8TAD8;S128-p DRQHREPSEQEHRRA 0.29470932998648 0.652137445248403 0.177666666666667 0.0623333333333334 10.0135890669305 2.53500207433544 0.177666666666667 0.0623333333333334 0.0996875891919147 0.557827335704177 1.98407144247909 0.62419301764276 Q8TAD8 SNIP1 Q8TAD8.S128.p_SNIP1 Q8TAD8_S128s _1_1_128_128 Q8TAD8 Q8TAD8 Smad nuclear-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.2093.2254.3 8.59 4.12 99 1 1 1 0 581.2723 1661.8305 S128s TMT10 123 (R) QHREPsEQEHR (R) QHREPS(1.0)EQEHR s:Phosphorylated S SNIP1 45833.8 3 5 1038.1 185.39 HUMAN 1 10.0136 2.535 DRQINTRSPKRNQRV-p Q5TKA1-2;S92-p DRQINTRSPKRNQRV 0.948677817568892 0.194577992510858 -0.0106666666666667 -0.151666666666667 0.453935937073674 9.34820343422985 -0.0106666666666667 -0.151666666666667 0.900754429148094 0.11619291749712 -0.130673259812067 -1.86795651280607 Q5TKA1 LIN9 Q5TKA1.2.S92.p_LIN9 Q5TKA1-2_S92s _1_1_92_92 Q5TKA1-2 Q5TKA1-2 Isoform 2 of Protein lin-9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10350.10350.5 13.88 13.88 1.101 3 1 1 0 523.8737 2535.368 S92s TMT10 79 (R) LFSDEDDRQINTRsPKR (N) LFS(0.0)DEDDRQINT(0.0)RS(0.99)PKR K:TMT10,s:Phosphorylated S LIN9 64323.3 8 2 1238.1 163 HUMAN 1 -0.4539 -9.3482 DRQKLVSSQEQDREQ-p Q8TDY2;S1222-p DRQKLVSSQEQDREQ 0.00956415249523423 0.00196312166393669 1.242 1.618 47.6603803879354 42.3110767668488 1.242 1.618 1.71380719274589e-05 5.8734371157156e-05 14.2196559445568 11.2213244611452 Q8TDY2 RB1CC1 Q8TDY2.S1222.p_RB1CC1 Q8TDY2_S1222s _1_1_1222_1222 Q8TDY2 Q8TDY2|Q8TDY2-2 RB1-inducible coiled-coil protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15488.15488.2 8.99 8.99 1.115 2 1 1 0 1170.1199 2259.2709 S1222s TMT10 1219 (K) LVSsQEQDREQLIQK (L) LVS(0.0)S(0.99)QEQDREQLIQK K:TMT10,s:Phosphorylated S RB1CC1 185198.6 2 16 707.1 238.96 HUMAN 1 47.6604 42.3111 DRQNRLNSPPSSIYK-p Q53EP0;S208-p DRQNRLNSPPSSIYK 0.815362833790705 0.0410600521276316 -0.0343333333333334 -0.296333333333333 1.70175540107902 18.584560280066 -0.0343333333333334 -0.296333333333333 0.675809760553436 0.013853004394636 -0.441691580940568 -3.57850009977187 Q53EP0 FNDC3B Q53EP0.S208.p_FNDC3B Q53EP0_S208s _1_1_208_208 Q53EP0 Q53EP0|Q53EP0-2 Fibronectin type III domain-containing protein 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18033.18239.2 14.48 8.21 3.551 4 1 1 0 822.4446 1563.9147 S208s TMT10 206 (R) LNsPPSSIYK (S) LNS(0.99)PPS(0.0)S(0.0)IY(0.0)K K:TMT10,s:Phosphorylated S FNDC3B 135053.9 8 1 1910.1 107.88 HUMAN 1 -1.7018 -18.5846 DRQQASKSPYNGVRK-p Q9UK58;S374-p DRQQASKSPYNGVRK 0.871586520393146 0.0835935516687949 0.0266666666666667 0.194666666666667 1.16835487185894 14.269525050459 0.0266666666666667 0.194666666666667 0.764125183012783 0.0374151503682171 0.315591192229978 2.7408566742371 Q9UK58 CCNL1 Q9UK58.S374.p_CCNL1 Q9UK58_S374s _1_1_374_374 Q9UK58 Q9UK58|Q9UK58-6 Cyclin-L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6506.6506.2 12.85 12.85 2.084 3 1 1 0 936.9909 1793.007 S374s TMT10 369 (R) QQASKsPYNGVR (K) QQAS(0.0)KS(0.99)PY(0.0)NGVR K:TMT10,s:Phosphorylated S CCNL1 60031.9 38 6 883.1 206.76 HUMAN 1 1.1684 14.2695 DRRADNCSPVAEEET-p Q9C0D5;S270-p DRRADNCSPVAEEET 0.228659143381456 0.0389146362633558 -0.276 0.398333333333333 12.3152739472264 18.930506081539 -0.276 0.398333333333333 0.0586776355373436 0.0127923222707665 -2.38838347600126 3.64990693057974 Q9C0D5 TANC1 Q9C0D5.S270.p_TANC1 Q9C0D5_S270s _1_1_270_270 Q9C0D5 Q9C0D5|Q9C0D5-2 Protein TANC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12211.12211.3 17.22 17.22 4.239 6 1 1 0 996.4721 2907.4406 S270s TMT10 265 (R) RADNCsPVAEEETTGSAESTLPK (A) RADNCS(0.99)PVAEEET(0.0)T(0.0)GS(0.0)AES(0.0)T(0.0)LPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TANC1 204383.7 3 8 678.1 246.63 HUMAN 1 -12.3153 18.9305 DRRAGAESPTMSVDG-p O75362;S407-p DRRAGAESPTMSVDG 0.303357638562599 0.0431735149849351 0.191666666666667 0.371666666666667 9.70951570015855 18.2853824178146 0.191666666666667 0.371666666666667 0.106917410062634 0.0148409519237406 1.93128465246515 3.51731590869646 O75362 ZNF217 O75362.S407.p_ZNF217 O75362_S407s _1_1_407_407 O75362 O75362 Zinc finger protein 217 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6060.6060.3 13.16 9.08 1.332 3 1 1 0 581.6082 1662.8431 S407s TMT10 402 (R) RAGAEsPTMSVDGR (Q) RAGAES(0.99)PT(0.0)MS(0.0)VDGR s:Phosphorylated S ZNF217 117152.8 3 5 394.1 330.8 HUMAN 1 9.7095 18.2854 DRRELRDSRDMRDSR-p Q5T200;S473-p DRRELRDSRDMRDSR 0.984881425304601 0.138123156165408 0.00366666666666667 0.160666666666667 0.133178118647405 11.3268485240887 0.00366666666666667 0.159151138342849 0.969800018658792 0.0736741523107558 0.0396420390375687 2.21244077505847 Q5T200 ZC3H13 Q5T200.S473.p_ZC3H13 Q5T200_S473s _1_1_473_473 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3978.3978.4 12.25 7.61 7.954 2 1 1 0 461.9712 1764.8972 S473s TMT10 469 (R) ELRDsRDMRDSR (E) ELRDS(0.99)RDMRDS(0.0)R s:Phosphorylated S ZC3H13 197316.7 2 10 24.1 987.82 HUMAN 1 0.1332 11.3268 DRRRDGWSLDRDRGD-p Q96T37;S622-p DRRRDGWSLDRDRGD 0.68673941840963 0.759285123401761 0.059 0.0496666666666667 3.06278306988715 1.65193981171572 0.059 0.0496666666666667 0.493994021556561 0.683606240778797 0.733135651631542 0.430216445750746 Q96T37 RBM15 Q96T37.S622.p_RBM15 Q96T37_S622s _1_1_622_622 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8647.8647.4 17.1 17.1 17.096 3 1 1 0 546.4962 2102.9962 S622s Hydrogen 619 (R) DGWsLDRDRGDRDLPSSR (D) DGWS(0.99)LDRDRGDRDLPS(0.0)S(0.0)R s:Phosphorylated S RBM15 107414.9 9 18 55.1 724.11 HUMAN 1 3.0628 1.6519 DRRRQRASQDTEDEE-p O15234;S10-p DRRRQRASQDTEDEE 0.82619699417303 0.104828823135371 -0.037 0.316333333333333 1.59960578782568 12.9415279044793 -0.037 0.316333333333333 0.691893771755907 0.0507980696903019 -0.418185524098959 2.49917205493939 O15234 CASC3 O15234.S10.p_CASC3 O15234_S10sT13t_2_2_10_13 O15234 O15234 Protein CASC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6739.6739.3 11.84 11.84 3.12 7 2 2 0 971.3977 2752.2455 S10s T13t TMT10 7 (R) QRAsQDtEDEESGASGSDSGGSPLR (G) QRAS(0.99)QDT(0.99)EDEES(0.0)GAS(0.0)GS(0.0)DS(0.0)GGS(0.0)PLR s:Phosphorylated S,t:Phosphorylated T CASC3 76390.7 2 13 323.1 362.08 HUMAN 1 -1.5996 12.9415 DRRSLSNSPQLKSRT-p Q6ZNL6;S703-p DRRSLSNSPQLKSRT 0.241925315986191 0.0929555626984486 -0.173333333333333 -0.250666666666667 11.7860582538918 13.6475720510403 -0.173333333333333 -0.250666666666667 0.0662817817872147 0.0431760387563937 -2.29444380648009 -2.62690890212793 Q6ZNL6 FGD5 Q6ZNL6.S703.p_FGD5 Q6ZNL6_S703s _1_1_703_703 Q6ZNL6 Q6ZNL6|B7ZM68 FYVE, RhoGEF and PH domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12619.12619.3 9.75 9.75 3.311 3 1 1 0 504.6123 1431.8572 S703s TMT10 699 (R) SLSNsPQLK (S) S(0.0)LS(0.0)NS(0.99)PQLK K:TMT10,s:Phosphorylated S FGD5 161828 2 7 1305.1 156.12 HUMAN 1 -11.7861 -13.6476 DRRSVASSQPAKPTK-p G3V1L9;S179-p DRRSVASSQPAKPTK 0.525170023338528 0.117214348370486 -0.156333333333333 0.208333333333333 5.17417923141304 12.275985539912 -0.156333333333333 0.208333333333333 0.303796017860466 0.0592108705021833 -1.13588366172273 2.3801646659771 G3V1L9 TJP1 G3V1L9.S179.p_TJP1 G3V1L9_S179s _1_1_179_179 G3V1L9 G3V1L9|Q07157|G5E9E7|A0A087X0K9|Q07157-2|H0YKB1 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8471.8471.2 12.16 12.16 1.141 4 1 1 0 984.558 1888.1471 S179s TMT10 175 (R) SVASsQPAKPTK (V) S(0.0)VAS(0.0)S(0.99)QPAKPT(0.0)K K:TMT10,s:Phosphorylated S TJP1 197797.8 5 42 41.2 827.72 HUMAN 1 -5.1742 12.276 DRRVSQNSLGEMTKL-p Q9ULH0-4;S885-p DRRVSQNSLGEMTKL 0.213229385106179 0.0120069404156348 -0.208 -0.387333333333333 12.9424323570697 26.8283684976112 -0.208 -0.387333333333333 0.050787491692234 0.00207569314106067 -2.50069869873089 -5.51470726441648 Q9ULH0 KIDINS220 Q9ULH0.4.S885.p_KIDINS220 Q9ULH0-4_S885s _1_1_885_885 Q9ULH0-4 Q9ULH0|Q9ULH0-4|Q9ULH0-2|A0A1W2PPB7|Q9ULH0-3 Isoform 4 of Kinase D-interacting substrate of 220 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14730.14730.2 15.24 15.24 3.601 3 1 1 0 866.4418 1651.9089 S885s TMT10 881 (R) VSQNsLGEMTK (L) VS(0.0)QNS(0.99)LGEMT(0.0)K K:TMT10,s:Phosphorylated S KIDINS220 196163.1 6 3 306.1 373.6 HUMAN 1 -12.9424 -26.8284 DRRYHRSSPYRERTR-p Q9BYW2;S438-p DRRYHRSSPYRERTR 0.495901315517715 0.903861965963361 -0.157333333333333 0.0143333333333333 5.60918434756933 0.612021379086891 -0.157333333333333 0.0143333333333334 0.274841028607773 0.868556074682779 -1.21461599016092 0.17349448059018 Q9BYW2 SETD2 Q9BYW2.S438.p_SETD2 Q9BYW2_S438s _1_1_438_438 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3065.3065.3 9.23 3.34 1.435 4 1 1 0 458.889 1294.6854 S438s TMT10 434 (R) YHRSsPYR (E) Y(0.0)HRS(0.0)S(0.99)PY(0.0)R s:Phosphorylated S SETD2 290615.4 3 5 58.1 711.11 HUMAN 1 -5.6092 0.612 DRSATSVSLDKILTK-p Q5THJ4;S1067-p DRSATSVSLDKILTK 0.892083594799862 0.835158859899171 -0.0246666666666667 -0.027 0.970177069413389 1.09669646114281 -0.0246666666666667 -0.027 0.799801645038192 0.776837807549477 -0.266380838241761 -0.297931141251938 Q5THJ4 VPS13D Q5THJ4.S1067.p_VPS13D Q5THJ4_S1067s _1_1_1067_1067 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12496.12496.2 12.28 5.75 1.144 4 1 1 0 723.3866 1365.799 S1067s TMT10 1062 (R) SATSVsLDK (I) S(0.0)AT(0.0)S(0.0)VS(0.99)LDK K:TMT10,s:Phosphorylated S VPS13D 495672.3 1 7 124.1 545.31 HUMAN 1 -0.9702 -1.0967 DRSGEQHSPAREKPH-p Q53HC0;S278-p DRSGEQHSPAREKPH 0.33399996603019 0.0267002800141588 0.176333333333333 -0.391666666666667 8.88981032606425 21.3582232848375 0.176333333333333 -0.391666666666667 0.129127566760423 0.00731438256441881 1.78928858614983 -4.17244676735157 Q53HC0 CCDC92 Q53HC0.S278.p_CCDC92 Q53HC0_S278s _1_1_278_278 Q53HC0 Q53HC0|Q53HC0-2 Coiled-coil domain-containing protein 92 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.2190.2190.3 7.39 7.39 7.386 2 1 1 0 426.5334 1197.6174 S278s TMT10 273 (R) SGEQHsPAR (E) S(0.0)GEQHS(0.99)PAR s:Phosphorylated S CCDC92 37074.5 2 3 3168.1 58.81 HUMAN 1 8.8898 -21.3582 DRSHLSISPVSLPKH-p Q5VT97;S317-p DRSHLSISPVSLPKH 0.807399255272832 0.500064170780712 0.034 -0.0803333333333333 1.78549542846317 4.02796383908233 0.034 -0.0803333333333333 0.662903721541626 0.395552028550043 0.460756440186844 -0.922314133285831 Q5VT97 SYDE2 Q5VT97.S317.p_SYDE2 Q5VT97_S317s _1_1_317_317 Q5VT97 Q5VT97|Q5VT97-2 Rho GTPase-activating protein SYDE2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19624.19624.3 9.1 9.1 2.275 4 1 1 0 601.6774 1723.0518 S317s TMT10 312 (R) SHLSIsPVSLPK (H) S(0.0)HLS(0.0)IS(0.99)PVS(0.0)LPK K:TMT10,s:Phosphorylated S SYDE2 134825.4 1 2 2624.1 76.52 HUMAN 1 1.7855 -4.028 DRSIERFSHNPNTTN-p Q9H9A7;S353-p DRSIERFSHNPNTTN 0.476784104106263 0.386255993477595 0.128 0.239 5.91979447811463 5.49213306991695 0.128 0.239 0.25587069701475 0.282349285460653 1.27026244342112 1.19326680463522 Q9H9A7 RMI1 Q9H9A7.S353.p_RMI1 Q9H9A7_S348sS353s_2_2_348_353 Q9H9A7 Q9H9A7 RecQ-mediated genome instability protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25189.25189.5 8.41 4.01 0 7 2 2 0 898.6094 4325.0907 S348s S353s N360n N361n N371n N372n Hydrogen 344 (R) NADRsIERFsHNPNTTnnFSLTCKNGNnnWSEK (N) N(0.0)ADRS(0.99)IERFS(0.99)HN(0.0)PN(0.0)T(0.0)T(0.0)N(0.99)N(0.99)FS(0.0)LT(0.0)CKN(0.25)GN(0.25)N(0.25)N(0.25)WS(0.0)EK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated RMI1 70713.7 1 7 2180.1 94.33 HUMAN 1 5.9198 5.4921 DRSISQDSLDELSME-p Q8N392;S69-p DRSISQDSLDELSME 0.112995094957984 0.677876095432049 0.597666666666667 -0.0963333333333333 19.769010502835 2.30666824567784 0.597666666666667 -0.0963333333333333 0.0105462715542093 0.587940226597001 3.82955196909194 -0.575622839830121 Q8N392 ARHGAP18 Q8N392.S69.p_ARHGAP18 Q8N392_S69s _1_1_69_69 Q8N392 Q8N392 Rho GTPase-activating protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.35245.35245.4 19.26 19.26 1.862 5 1 1 0 913.9702 3572.8649 S69s TMT10 64 (R) SISQDsLDELSMEDYWIELENIKK (S) S(0.0)IS(0.0)QDS(0.99)LDELS(0.0)MEDY(0.0)WIELENIKK K:TMT10,s:Phosphorylated S ARHGAP18 75260.7 1 2 3356.1 53 HUMAN 1 19.769 -2.3067 DRSPAAETPPLQRRP-p Q8TE68;T187-p DRSPAAETPPLQRRP 0.662100665140048 0.617752353051399 0.059 0.0513333333333333 3.35488238992614 2.84443904904516 0.059 0.0513333333333334 0.461861499267966 0.519464765181021 0.791615547984601 0.688541239564017 Q8TE68 EPS8L1 Q8TE68.T187.p_EPS8L1 Q8TE68_T187t _1_1_187_187 Q8TE68 Q8TE68|B4DKV7|Q8TE68-2|Q8TE68-3|K7EN83|K7EKX9 Epidermal growth factor receptor kinase substrate 8-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5240.5454.3 17.5 17.5 9.449 2 1 1 0 506.5753 1437.7445 T187t Hydrogen 180 (R) DRSPAAEtPPLQR (R) DRS(0.0)PAAET(0.99)PPLQR t:Phosphorylated T EPS8L1 80534.9 12 4 326.1 361.27 HUMAN 1 3.3549 2.8444 DRSPIRGSPRREPRD-p Q9HCD5;S34-p DRSPIRGSPRREPRD 0.167891217287721 0.0363415868209319 0.263666666666667 0.480333333333333 15.4702201830213 19.3763654859128 0.263666666666667 0.480333333333333 0.0283777515239149 0.0115441896127252 2.96711542144547 3.74300755911335 Q9HCD5 NCOA5 Q9HCD5.S34.p_NCOA5 Q9HCD5_S34s _1_1_34_34 Q9HCD5 Q9HCD5 Nuclear receptor coactivator 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4172.4172.3 8.11 3.2 3.459 2 1 1 0 393.5456 1098.6581 S34s TMT10 29 (R) SPIRGsPR (R) S(0.0)PIRGS(0.99)PR s:Phosphorylated S NCOA5 65763.5 1 6 426.1 319.02 HUMAN 1 15.4702 19.3764 DRSPLEHSSPEKEAP-p Q13459;S1114-p DRSPLEHSSPEKEAP 0.39120743112417 0.614311173288766 0.14 -0.083 7.51789547448059 2.8770598464221 0.14 -0.083 0.177096693427001 0.515577570090913 1.55139760541077 -0.695233894058844 Q13459 MYO9B Q13459.S1114.p_MYO9B Q13459_S1114sS1115sS1122s_3_3_1114_1122 Q13459 Q13459|M0R0P8|Q13459-2 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13369.13369.4 7.95 7.95 7.946 4 3 3 0 694.827 2536.3862 S1114s S1115s S1122s TMT10 1109 (R) SPLEHssPEKEAPsPEK (T) S(0.0)PLEHS(0.99)S(0.99)PEKEAPS(0.99)PEK K:TMT10,s:Phosphorylated S MYO9B 244993.9 2 32 211.1 438.12 HUMAN 1 7.5179 -2.8771 DRSPLRRSPPRASYV-p Q96PK6;S220-p DRSPLRRSPPRASYV 0.332444158767341 0.537061533438633 0.135 0.0636666666666667 8.93070351141518 3.63245844544468 0.135 0.0636666666666667 0.127917407461784 0.433265546868696 1.796367211147 0.846053775073043 Q96PK6 RBM14 Q96PK6.S220.p_RBM14 Q96PK6_S220s _1_1_220_220 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13632.13632.2 19.34 13.85 17.968 6 1 1 0 1063.5245 2046.0767 S220s Hydrogen 220 (R) sPPRASYVAPLTAQPATYR (A) S(0.99)PPRAS(0.0)Y(0.0)VAPLT(0.0)AQPAT(0.0)Y(0.0)R s:Phosphorylated S RBM14 69661.6 10 6 151.1 510.8 HUMAN 1 8.9307 3.6325 DRSRLPKSPPYTAFL-p P23588;S93-p DRSRLPKSPPYTAFL 0.111204691184686 0.928193312474012 -0.601666666666667 0.01 19.9244157756033 0.455971496098434 -0.601666666666667 0.01 0.0101755624132458 0.900332340160863 -3.86274792582582 0.131220602781877 P23588 EIF4B P23588.S93.p_EIF4B P23588_S93s _1_1_93_93 P23588 E7EX17|P23588|P23588-2|F8VSC7|F8VYE9 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.36121.36121.3 27.73 27.73 2.697 6 1 1 0 960.4905 2799.4857 S93s TMT10 93 (K) sPPYTAFLGNLPYDVTEESIK (E) S(0.99)PPY(0.0)T(0.0)AFLGNLPY(0.0)DVT(0.0)EES(0.0)IK K:TMT10,s:Phosphorylated S EIF4B 69207 22 1 146.1 516.36 HUMAN 1 -19.9244 0.456 DRSRSTRSPSQRSGS-p Q9UKJ3;S998-p DRSRSTRSPSQRSGS 0.0360407965324359 0.00313960863177787 0.973666666666667 0.801333333333333 33.2934143868473 37.5908411633945 0.973666666666667 0.801333333333333 0.000468444949838416 0.000174146954414519 7.50019801227095 9.09880279806525 Q9UKJ3 GPATCH8 Q9UKJ3.S998.p_GPATCH8 Q9UKJ3_S998s _1_1_998_998 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.1912.1912.3 10.66 5.4 2.298 4 1 1 0 409.8732 1147.6381 S998s TMT10 995 (R) STRsPSQR (S) S(0.0)T(0.0)RS(0.99)PS(0.0)QR s:Phosphorylated S GPATCH8 165107.3 2 10 231.1 422.52 HUMAN 1 33.2934 37.5908 DRSWVIGSPEILRKR-p Q6P0Q8;S900-p DRSWVIGSPEILRKR 0.550471078531326 0.00929166830878165 0.102333333333333 -0.425 4.78268290281148 28.6905775633036 0.102333333333333 -0.425 0.332454112591697 0.00135189276455416 1.06407886123888 -6.03439278826948 Q6P0Q8 MAST2 Q6P0Q8.S900.p_MAST2 Q6P0Q8_S900s _1_1_900_900 Q6P0Q8 Q6P0Q8|Q6P0Q8-2|E7ERL6 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27914.27914.2 17.76 17.76 7.516 2 1 1 0 783.4183 1485.8627 S900s TMT10 895 (R) SWVIGsPEILR (K) S(0.0)WVIGS(0.99)PEILR s:Phosphorylated S MAST2 197687.5 7 51 121.1 549.41 HUMAN 1 4.7827 -28.6906 DRTFLEGSHTRGLDH-p Q6ZU80;S1033-p DRTFLEGSHTRGLDH 0.766667060694937 0.012975263020045 -0.052 -0.378 2.21177058712887 26.275357959 -0.052 -0.378 0.600928693262056 0.00235756786988707 -0.555205672517332 -5.3670599387432 Q6ZU80 CEP128 Q6ZU80.S1033.p_CEP128 Q6ZU80_S1033s _1_1_1033_1033 Q6ZU80 Q6ZU80 Centrosomal protein of 128 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9137.9137.3 14.7 14.7 3.245 3 1 1 0 452.889 1276.6847 S1033s TMT10 1028 (R) TFLEGsHTR (G) T(0.0)FLEGS(0.99)HT(0.0)R s:Phosphorylated S CEP128 128640.5 2 13 1261.1 161 HUMAN 1 -2.2118 -26.2754 DRTPRPASPGPSLPA-p Q8IY33;S649-p DRTPRPASPGPSLPA 0.694699286180922 0.664898904144811 0.086 0.066 2.96888171763789 2.4255556830999 0.086 0.066 0.504791261566418 0.572063753976022 0.714084707461716 0.601034480708883 Q8IY33 MICALL2 Q8IY33.S649.p_MICALL2 Q8IY33_S649s _1_1_649_649 Q8IY33 Q8IY33|Q8IY33-5|Q8IY33-3 MICAL-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8076.8076.3 12.94 12.94 2.671 3 1 1 0 571.64 1632.9383 S649s TMT10 644 (R) TPRPAsPGPSLPAR (S) T(0.0)PRPAS(0.99)PGPS(0.0)LPAR s:Phosphorylated S MICALL2 98299.3 1 23 387.1 332.82 HUMAN 1 2.9689 2.4256 DRVHKFTSDSPMAAR-p A0A087X1R1;S393-p DRVHKFTSDSPMAAR 0.750387635664066 0.332084772433778 0.0436666666666667 -0.122666666666667 2.37530422357366 6.34306727519792 0.0436666666666667 -0.122666666666667 0.578721447453275 0.232109690500033 0.590400211500449 -1.34511872102826 A0A087X1R1 SMTN A0A087X1R1.S393.p_SMTN A0A087X1R1_S393s _1_1_393_393 A0A087X1R1 A0A087X1R1|A0A087WVP4|P53814-6|P53814-5 Smoothelin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11692.11692.2 10 5.84 1.103 3 1 1 0 696.316 1311.6565 S393s TMT10 391 (K) FTsDSPMAAR (L) FT(0.0)S(0.99)DS(0.0)PMAAR s:Phosphorylated S SMTN 108527.2 1 7 826.1 217.61 HUMAN 1 2.3753 -6.3431 DRVLFELTGLSGSKN-p Q9Y6Q5-2;T223-p DRVLFELTGLSGSKN 0.989051104038883 0.0984180293339524 0.00266666666666666 0.727666666666667 0.0973486117875771 13.3113730861454 0.00266666666666666 0.727666666666667 0.977834011022679 0.046651186238034 0.0290920453491263 2.56588069837406 Q9Y6Q5 AP1M2 Q9Y6Q5.2.T223.p_AP1M2 Q9Y6Q5-2_T223t _1_1_223_223 Q9Y6Q5-2 Q9Y6Q5-2 Isoform 2 of AP-1 complex subunit mu-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.31066.31066.3 11.84 11.84 2 3 1 1 0 597.0014 1709.0249 T223t TMT10 218 (R) VLFELtGLSGSK (N) VLFELT(0.99)GLS(0.0)GS(0.0)K K:TMT10,t:Phosphorylated T AP1M2 48322.8 1 4 4110.1 37.43 HUMAN 1 0.0973 13.3114 DRVLFELTGRSKNKS-p Q9Y6Q5;T223-p DRVLFELTGRSKNKS 0.751349877647707 0.0594682478414764 -0.0726666666666667 0.346666666666667 2.36650608077053 16.3316719471636 -0.0726666666666667 0.346666666666667 0.579895037059324 0.0232719516145009 -0.588520149733928 3.12986800919129 Q9Y6Q5 AP1M2 Q9Y6Q5.T223.p_AP1M2 Q9Y6Q5_T223t _1_1_223_223 Q9Y6Q5 Q9Y6Q5 AP-1 complex subunit mu-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25096.25096.2 11.57 11.57 99 1 1 1 0 622.3374 1163.6986 T223t TMT10 218 (R) VLFELtGR (S) VLFELT(1.0)GR t:Phosphorylated T AP1M2 48221.7 1 1 4110.2 37.43 HUMAN 1 -2.3665 16.3317 DRVLVERSAAETVTK-p S4R3N1;S21-p DRVLVERSAAETVTK 0.936107507392066 0.0728417465901325 0.0133333333333333 0.321333333333333 0.558749055342802 15.1120524134344 0.0133333333333333 0.321333333333333 0.879275747518355 0.0308173122408459 0.159211915133288 2.89758508897968 S4R3N1 HSPE1-MOB4 S4R3N1.S21.p_HSPE1-MOB4 S4R3N1_S21s _1_1_21_21 S4R3N1 S4R3N1|P61604 HSPE1-MOB4 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14221.14221.3 13.7 13.7 4.4 3 1 1 0 647.6998 1861.1159 S21s TMT10 16 (R) VLVERsAAETVTK (G) VLVERS(0.99)AAET(0.0)VT(0.0)K K:TMT10,s:Phosphorylated S HSPE1-MOB4 30249.8 1 3 2805.1 70.03 HUMAN 1 0.5587 15.1121 DRVRNLQSEVEGVKN-p Q9BV40;S18-p DRVRNLQSEVEGVKN 0.0854356127909767 0.506954929539413 0.364 0.0776666666666667 22.8670753929921 3.9539173259041 0.364 0.0776666666666667 0.00516764249257784 0.402353948293694 4.52307418972681 0.908158043366529 Q9BV40 VAMP8 Q9BV40.S18.p_VAMP8 Q9BV40_S18s _1_1_18_18 Q9BV40 Q9BV40|B8ZZT4 Vesicle-associated membrane protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17429.17429.2 14.89 14.89 99 1 1 1 0 820.9365 1560.8997 S18s TMT10 15 (R) NLQsEVEGVK (N) NLQS(1.0)EVEGVK K:TMT10,s:Phosphorylated S VAMP8 11495.1 1 1 4794.1 26.51 HUMAN 1 22.8671 3.9539 DRWSDNQSSGKDKNY-p Q9NRR4;S377-p DRWSDNQSSGKDKNY 0.423790415728257 0.215845452846001 0.133666666666667 -0.138 6.87201038211677 8.76272393610443 0.133666666666667 -0.138 0.205493912886209 0.132962020601212 1.43859018128202 -1.76667285324489 Q9NRR4 DROSHA Q9NRR4.S377.p_DROSHA Q9NRR4_S377s _1_1_377_377 Q9NRR4 Q9NRR4|Q9NRR4-4|Q9NRR4-2|Q9NRR4-3 Ribonuclease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6692.6692.4 7.2 7.2 7.204 3 1 1 0 573.2911 2210.1769 S377s TMT10 370 (K) DRWSDNQsSGKDK (N) DRWS(0.0)DNQS(0.99)S(0.0)GKDK K:TMT10,s:Phosphorylated S DROSHA 160910.7 1 5 1630.1 125.18 HUMAN 1 6.872 -8.7627 DRYGRAESPDLRRLP-p Q6UN15;S304-p DRYGRAESPDLRRLP 0.708099179787476 0.0789167244059908 0.0516666666666667 0.253333333333333 2.81815657969124 14.6399249919596 0.0516666666666667 0.253333333333333 0.522617974030063 0.0343563881622738 0.683229481636312 2.80940812406181 Q6UN15 FIP1L1 Q6UN15.S304.p_FIP1L1 Q6UN15_S304s _1_1_304_304 Q6UN15 A0A0B4J203|Q6UN15|Q6UN15-5|Q6UN15-4 Pre-mRNA 3'-end-processing factor FIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27500.27500.4 23.26 23.26 11.983 4 1 1 0 722.6462 2807.5941 S304s TMT10 302 (R) AEsPDLRRLPGAIDVIGQTITISR (V) AES(0.99)PDLRRLPGAIDVIGQT(0.0)IT(0.0)IS(0.0)R s:Phosphorylated S FIP1L1 66639.3 12 7 404.1 326.66 HUMAN 1 2.8182 14.6399 DSADGRATPSENLVP-p Q8N684-3;T246-p DSADGRATPSENLVP 0.219634467679689 0.262665700877785 0.214666666666667 0.132333333333333 12.6739734532862 7.64852163789127 0.214666666666667 0.132333333333333 0.0540259801485544 0.171849327208775 2.45248128987503 1.57364640619453 Q8N684 CPSF7 Q8N684.3.T246.p_CPSF7 Q8N684-3_T246t _1_1_246_246 Q8N684-3 Q8N684-3|Q8N684-2 Isoform 3 of Cleavage and polyadenylation specificity factor subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9820.9820.2 15.42 15.42 1.203 7 1 1 0 1264.5747 2448.18 T246t TMT10 236 (R) DSSDSADGRAtPSENLVPSSAR (V) DS(0.0)S(0.0)DS(0.0)ADGRAT(0.99)PS(0.0)ENLVPS(0.0)S(0.0)AR t:Phosphorylated T CPSF7 56545.1 3 5 1653.1 123.34 HUMAN 1 12.674 7.6485 DSAEDTQSNDGKEVV-p Q9H2G2;S571-p DSAEDTQSNDGKEVV 0.369943419338104 0.0205344648135939 -0.265 0.328666666666667 8.00913775820055 23.0920454863207 -0.265 0.328666666666667 0.158156200906876 0.00490676717583289 -1.63674573689417 4.57107459490063 Q9H2G2 SLK Q9H2G2.S571.p_SLK Q9H2G2_S571s _1_1_571_571 Q9H2G2 Q9H2G2|Q9H2G2-2 STE20-like serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24961.24961.4 22.31 20.71 1.132 7 1 1 0 1138.5441 4471.1509 S571s TMT10 540 (K) DVISNTSDVIGTCEAADVAQKVDEDSAEDTQsNDGK (E) DVIS(0.0)NT(0.0)S(0.0)DVIGT(0.0)CEAADVAQKVDEDS(0.0)AEDT(0.0)QS(0.99)NDGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLK 143320 4 11 329.1 359.67 HUMAN 1 -8.0091 23.092 DSAGTAGTPGGTPAG-p Q92925;T217-p DSAGTAGTPGGTPAG 0.611537267066762 0.0770158615546486 0.084 -0.245333333333333 3.95851670308689 14.7720570620732 0.084 -0.245333333333333 0.40192806261728 0.0333268520722975 0.909191705993305 -2.83399368247873 Q92925 SMARCD2 Q92925.T217.p_SMARCD2 Q92925_T217t _1_1_217_217 Q92925 Q92925|Q92925-2|B9EGA3|Q92925-3|J3KMX2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8230.8230.3 22.99 19.97 3.474 4 1 1 0 752.3591 2175.093 T217t TMT10 207 (K) AEGDSAGTAGtPGGTPAGDK (V) AEGDS(0.0)AGT(0.0)AGT(0.99)PGGT(0.0)PAGDK K:TMT10,t:Phosphorylated T SMARCD2 59148.1 3 3 1828.1 112.46 HUMAN 1 3.9585 -14.7721 DSAIPVESDTDDEGA-p Q96D46;S468-p DSAIPVESDTDDEGA 0.288933529600576 0.753165273433363 0.157333333333333 0.0316666666666667 10.1679342534461 1.70055671510375 0.157333333333333 0.0316666666666667 0.0962069783565166 0.675996314958481 2.01090207199498 0.441368802956097 Q96D46 NMD3 Q96D46.S468.p_NMD3 Q96D46_S468s _1_1_468_468 Q96D46 C9JA08|Q96D46 60S ribosomal export protein NMD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12416.12620.3 20.38 20.38 2.173 3 1 1 0 694.9743 2002.9403 S468s TMT10 461 (R) DSAIPVEsDTDDEGAPR (I) DS(0.0)AIPVES(0.99)DT(0.0)DDEGAPR s:Phosphorylated S NMD3 58800.3 7 6 1402.1 146.41 HUMAN 1 10.1679 1.7006 DSATFAHTPPPAQAT-p Q9UPS6;T381-p DSATFAHTPPPAQAT 0.246490628895716 0.0064803600717437 0.218666666666667 0.488 11.6390386114148 31.4671088356481 0.218666666666667 0.488 0.0685639988340514 0.00071332774521462 2.26846884306736 6.87960225532538 Q9UPS6 SETD1B Q9UPS6.T381.p_SETD1B Q9UPS6_T381t _1_1_381_381 Q9UPS6 Q9UPS6|Q9UPS6-2|A0A0A0MQV9 Histone-lysine N-methyltransferase SETD1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15953.15953.3 24.29 17.84 4.828 4 1 1 0 1024.5177 2991.5729 T381t TMT10 370 (K) AQPQDSATFAHtPPPAQATPAPGFK (S) AQPQDS(0.0)AT(0.0)FAHT(0.99)PPPAQAT(0.0)PAPGFK K:TMT10,t:Phosphorylated T SETD1B 213997.2 3 15 570.1 269.37 HUMAN 1 11.639 31.4671 DSCKLMLSTSEYSQS-p Q12888-2;S523-p DSCKLMLSTSEYSQS 0.179599305082774 0.109716122081349 -0.518333333333333 -0.260666666666667 14.7221243629207 12.6759065154857 -0.518333333333333 -0.260666666666667 0.0337122364026462 0.0540019383185367 -2.82649601633089 -2.4515225655438 Q12888 TP53BP1 Q12888.2.S523.p_TP53BP1 Q12888-2_S523s_1_1_523_523 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18596.18596.2 13.19 13.19 1.119 6 1 1 0 1013.0021 1929.0403 M521m S523s TMT10 520 (K) LmLsTSEYSQSPK (M) LM(1.0)LS(0.99)T(0.0)S(0.0)EY(0.0)S(0.0)QS(0.0)PK K:TMT10,m:Oxidized methionine,s:Phosphorylated S TP53BP1 216167.2 9 23 3.1 2297.07 HUMAN 1 -14.7221 -12.6759 DSCLGRHSPVPRPAS-p Q13469;S236-p DSCLGRHSPVPRPAS 0.864479811481231 0.0347677052789133 -0.031 0.304333333333333 1.23153106748257 19.6438517390614 -0.031 0.304333333333333 0.753090021581772 0.010854625045653 -0.33098799707764 3.79945580564162 Q13469 NFATC2 Q13469.S236.p_NFATC2 Q13469_S236s _1_1_236_236 Q13469 Q13469 Nuclear factor of activated T-cells, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8880.8880.3 11.74 11.74 2.387 4 1 1 0 731.0217 2111.0865 S236s TMT10 224 (R) TSLAEDSCLGRHsPVPR (P) T(0.0)S(0.0)LAEDS(0.0)CLGRHS(0.99)PVPR C:Carbamidomethylation,s:Phosphorylated S NFATC2 101056.9 3 4 843.1 214.04 HUMAN 1 -1.2315 19.6439 DSDAGFHSLPRSGAR-p Q5SYE7-2;S324-p DSDAGFHSLPRSGAR 0.399126006215592 0.230060822183448 0.129666666666667 -0.156666666666667 7.35914756402686 8.40664518955148 0.129666666666667 -0.156666666666667 0.183689885564288 0.144322977801544 1.52374512255344 -1.70507017503939 Q5SYE7 NHSL1 Q5SYE7.2.S324.p_NHSL1 Q5SYE7-2_S324s _1_1_324_324 Q5SYE7-2 Q5SYE7|Q5SYE7-2 Isoform 2 of NHS-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15109.15109.3 17.84 17.84 5.367 2 1 1 0 541.9298 1543.8066 S324s TMT10 316 (R) LDSDAGFHsLPR (S) LDS(0.0)DAGFHS(0.99)LPR s:Phosphorylated S NHSL1 171957.1 2 4 747.1 232.6 HUMAN 1 7.3591 -8.4066 DSDEDDDY_______-p O14737;Y125-p DSDEDDDY_______ 0.131380793290089 0.352443374882569 1.24033333333333 -0.662333333333333 18.2213643228402 6.00419435746183 1.24033333333333 -0.662333333333333 0.0150613384451646 0.250946165660886 3.50720446710676 -1.2850048551071 O14737 PDCD5 O14737.Y125.p_PDCD5 O14737_Y125y _1_1_125_125 O14737 O14737|K7EQA1 Programmed cell death protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12920.13127.2 12.54 12.54 2.825 2 1 1 0 935.3975 1789.8202 Y125y TMT10 115 (R) KVMDSDEDDDy (-) KVMDS(0.0)DEDDDY(0.99) K:TMT10,y:Phosphorylated Y PDCD5 14284.8 4 5 2922.1 65.91 HUMAN 1 18.2214 -6.0042 DSDEDDNSFLKQQSP-p Q9UHB6-4;S693-p DSDEDDNSFLKQQSP 0.186107506715315 0.00381084269641223 0.206 0.599 14.3533931571159 35.848708269905 0.206 0.599 0.0366995453696686 0.000260093304844815 2.75803615089857 8.41196165011755 Q9UHB6 LIMA1 Q9UHB6.4.S693.p_LIMA1 Q9UHB6-4_S693s _1_1_693_693 Q9UHB6-4 Q9UHB6-4|Q9UHB6-5|Q9UHB6-2|F8VQE1|Q9UHB6-3|F8VS07 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21473.21473.3 9.89 9.89 2.05 3 1 1 0 1225.8644 3595.6383 S693s TMT10 669 (K) EGHSLEMENENLVENGADSDEDDNsFLK (Q) EGHS(0.0)LEMENENLVENGADS(0.0)DEDDNS(0.99)FLK K:TMT10,s:Phosphorylated S LIMA1 85678.4 1 29 42.1 822.82 HUMAN 1 14.3534 35.8487 DSDEEGASDRRGPER-p Q8TDD1-2;S788-p DSDEEGASDRRGPER 0.386191491797539 0.812643386194471 -0.138666666666667 -0.064 7.64807458018724 1.26246949691954 -0.138666666666667 -0.0639999999999999 0.171867018089782 0.747744195295674 -1.57404456706118 -0.338444767740008 Q8TDD1 DDX54 Q8TDD1.2.S788.p_DDX54 Q8TDD1-2_S788s _1_1_788_788 Q8TDD1-2 Q8TDD1-2 Isoform 2 of ATP-dependent RNA helicase DDX54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4108.4108.3 9.14 4.39 1.386 2 1 1 0 844.0692 2450.2272 S788s TMT10 775 (K) QKIDDRDSDEEGAsDRR (G) QKIDDRDS(0.0)DEEGAS(0.99)DRR K:TMT10,s:Phosphorylated S DDX54 98949.4 3 7 373.1 338.92 HUMAN 1 -7.6481 -1.2625 DSDGEGESDDPEKKK-p O75351;S108-p DSDGEGESDDPEKKK 0.932495027427658 0.339325069958729 -0.014 0.0973333333333334 0.601592470463158 6.21796400804072 -0.014 0.0973333333333334 0.870644283681 0.238893096195922 -0.170722191126121 1.32297512927685 O75351 VPS4B O75351.S108.p_VPS4B O75351_S102sS108s_2_2_102_108 O75351 O75351|K7EKZ3 Vacuolar protein sorting-associated protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9859.9859.5 13.24 9.09 2.195 3 2 2 0 981.4958 4743.5137 S102s S108s TMT10 83 (K) AQKPVKEGQPSPADEKGNDsDGEGEsDDPEKK (K) AQKPVKEGQPS(0.0)PADEKGNDS(0.99)DGEGES(0.99)DDPEKK K:TMT10,s:Phosphorylated S VPS4B 49472.3 5 5 757.1 230.65 HUMAN 1 -0.6016 6.218 DSDGKRGSPQNLPIE-p Q9NSD4;S91-p DSDGKRGSPQNLPIE 0.176526545076315 0.125212936006743 -0.219 0.186333333333333 14.9499173456627 11.8987500655086 -0.219 0.186333333333333 0.0319895599120902 0.06458400802645 -2.86906339571624 2.3132456987987 Q9NSD4 ZNF275 Q9NSD4.S91.p_ZNF275 Q9NSD4_S91s _1_1_91_91 Q9NSD4 Q9NSD4|Q9NSD4-2|A6NFS0 Zinc finger protein 275 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10584.10584.5 18.13 18.13 99 1 1 1 0 486.6515 2349.265 S91s TMT10 89 (K) RGsPQNLPIEHHFACK (E) RGS(1.0)PQNLPIEHHFACK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF275 49811.3 2 1 5567.1 18.13 HUMAN 1 -14.9499 11.8988 DSDPFWDSPPANPFQ-p Q16584;S815-p DSDPFWDSPPANPFQ 0.93527869194269 0.818161499685297 -0.013 0.0446666666666667 0.568931054290499 1.2193511660205 -0.013 0.0446666666666667 0.877216707295684 0.755205046527941 -0.161955372461217 0.327996728607548 Q16584 MAP3K11 Q16584.S815.p_MAP3K11 Q16584_S815s_1_1_815_815 Q16584 Q16584|Q16584-2|E9PID4 Mitogen-activated protein kinase kinase kinase 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34122.34122.4 14.88 14.88 14.877 3 1 1 0 942.9324 3687.7277 S815s N819n TMT10 800 (R) RAPWTLFPDSDPFWDsPPAnPFQGGPQDCR (A) RAPWT(0.0)LFPDS(0.0)DPFWDS(0.99)PPAN(1.0)PFQGGPQDCR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated MAP3K11 93313.9 1 18 536.1 278.53 HUMAN 1 -0.5689 1.2194 DSDPKPGSPKVKEYV-p Q9BVI0;S902-p DSDPKPGSPKVKEYV 0.430275482317801 0.00760455374265057 -0.189333333333333 -0.479 6.74389097893723 30.2544569986703 -0.189333333333333 -0.479 0.211646407975979 0.000943092519584614 -1.41610392511651 -6.49950046304293 Q9BVI0 PHF20 Q9BVI0.S902.p_PHF20 Q9BVI0_S902s _1_1_902_902 Q9BVI0 Q9BVI0 PHD finger protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6179.6179.3 13.29 8.64 3.156 3 1 1 0 766.0957 2216.3056 S902s TMT10 892 (R) SKGDSDPKPGsPK (V) S(0.0)KGDS(0.0)DPKPGS(0.99)PK K:TMT10,s:Phosphorylated S PHF20 116810 6 6 1726.1 119.34 HUMAN 1 -6.7439 -30.2545 DSDQVAQSDGEESPA-p D6REX3;S527-p DSDQVAQSDGEESPA 0.131539706649705 0.00643197596649139 -0.344666666666667 0.763666666666667 18.1932738691182 31.5142516531487 -0.344666666666667 0.763666666666667 0.0151590719087862 0.000705626422343878 -3.50148629898821 6.89473808563197 D6REX3 NotFound D6REX3.S527.p_NotFound D6REX3_S527s _1_1_527_527 D6REX3 D6REX3|O94979-8|O94979-2|O94979-9|O94979-3 Protein transport protein Sec31A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19680.19680.5 29.51 27.69 1.136 3 1 1 0 787.9869 3855.9339 S527s TMT10 520 (K) DSDQVAQsDGEESPAAEEQLLGEHIKEEK (E) DS(0.0)DQVAQS(0.99)DGEES(0.0)PAAEEQLLGEHIKEEK K:TMT10,s:Phosphorylated S SEC31A 137193.7 3 5 665.1 250.42 HUMAN 1 -18.1933 31.5143 DSDSGDDSDKRSCEE-p O43896;S680-p DSDSGDDSDKRSCEE 0.153441400704023 0.189976048463066 0.264333333333333 0.156666666666667 16.360364756699 9.48648868057484 0.264333333333333 0.156666666666667 0.0231187061186078 0.112551459732832 3.13769349304058 1.89189544082428 O43896 KIF1C O43896.S680.p_KIF1C O43896_S674sS676sS680s_3_3_674_680 O43896 O43896 Kinesin-like protein KIF1C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16493.16493.4 9.55 9.55 3.304 6 3 3 0 794.8136 2936.3369 S674s S676s S680s TMT10 670 (R) LYADsDsGDDsDKRSCEESWR (L) LY(0.0)ADS(0.99)DS(0.99)GDDS(0.99)DKRS(0.0)CEES(0.0)WR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S KIF1C 123800.2 2 14 954.1 195.97 HUMAN 1 16.3604 9.4865 DSDSKADSDGAKPEP-p Q7Z4V5-4;S240-p DSDSKADSDGAKPEP 0.585616421770961 0.247119186372644 -0.263666666666667 0.804333333333333 4.27310440618879 7.99942053602895 -0.263666666666667 0.804333333333333 0.373843263615097 0.158510467333703 -0.968986880044345 1.63454204215963 Q7Z4V5 HDGFRP2 Q7Z4V5.4.S240.p_HDGFRP2 Q7Z4V5-4_S240s _1_1_240_240 Q7Z4V5-4 Q7Z4V5-3|Q7Z4V5-4|Q7Z4V5-2 Isoform 4 of Hepatoma-derived growth factor-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11068.11068.3 16.12 16.12 99 1 1 1 0 685.012 1973.0526 S240s TMT10 238 (K) ADsDGAKPEPVAMAR (S) ADS(1.0)DGAKPEPVAMAR K:TMT10,s:Phosphorylated S HDGFL2 74899.1 1 4 712.1 238.42 HUMAN 1 -4.2731 7.9994 DSDSRGLSDLQVGFG-p Q9BZ95;S659-p DSDSRGLSDLQVGFG 0.579287608093284 0.710845473186276 0.105666666666667 -0.0356666666666666 4.35966381489692 2.03814426839803 0.105666666666667 -0.0356666666666666 0.366465941488107 0.62543988489343 0.985285086871979 -0.517172418849115 Q9BZ95 WHSC1L1 Q9BZ95.S659.p_WHSC1L1 Q9BZ95_S659s _1_1_659_659 Q9BZ95 Q9BZ95|Q9BZ95-5|Q9BZ95-2|Q9BZ95-4 Histone-lysine N-methyltransferase NSD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24886.24886.2 7.78 7.78 99 1 1 1 0 715.3681 1349.7626 S659s Hydrogen 657 (R) GLsDLQVGFGK (Q) GLS(1.0)DLQVGFGK K:TMT10-Lys-Only,s:Phosphorylated S NSD3 165432.8 1 8 1351.1 150.85 HUMAN 1 4.3597 -2.0381 DSDYVYPSLESDEDN-p O75151;S879-p DSDYVYPSLESDEDN 0.334493735589086 0.020176416743495 -0.143333333333333 0.321333333333333 8.87766129738362 23.2161978906651 -0.143333333333333 0.321333333333333 0.129489296159124 0.00476848269533931 -1.78718560450816 4.60050794641874 O75151 PHF2 O75151.S879.p_PHF2 O75151_S879sS882s_2_2_879_882 O75151 O75151|A0A087WW48 Lysine-specific demethylase PHF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30012.30012.3 10.02 10.02 1.615 5 2 2 0 951.4183 2691.3078 S879s S882s N886n TMT10 872 (K) DSDYVYPsLEsDEDnPIFK (S) DS(0.0)DY(0.0)VY(0.0)PS(0.99)LES(0.99)DEDN(1.0)PIFK K:TMT10,s:Phosphorylated S,n:Deamidated PHF2 121742.7 1 14 376.2 336.84 HUMAN 1 -8.8777 23.2162 DSEALTDSWEALSLD-p Q9H2M9;S875-p DSEALTDSWEALSLD 0.158821380492927 0.354611943918411 0.276666666666667 0.120666666666667 16.0055474493196 5.97047541415311 0.276666666666667 0.120666666666667 0.025086799282255 0.252902113401715 3.06925552463176 1.27899935885267 Q9H2M9 RAB3GAP2 Q9H2M9.S875.p_RAB3GAP2 Q9H2M9_S875s _1_1_875_875 Q9H2M9 Q9H2M9 Rab3 GTPase-activating protein non-catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.34153.34153.3 26.07 26.07 1.172 8 1 1 0 1353.3489 3978.0627 S875s TMT10 859 (K) KFSQTVLGADSEALTDsWEALSLDTEYWK (L) KFS(0.0)QT(0.0)VLGADS(0.0)EALT(0.0)DS(0.99)WEALS(0.0)LDT(0.0)EY(0.0)WK K:TMT10,s:Phosphorylated S RAB3GAP2 157579.4 3 7 1674.1 121.94 HUMAN 1 16.0055 5.9705 DSEDEEMSEDEEDDS-p P19338;S34-p DSEDEEMSEDEEDDS 0.603716896580728 0.0135649676192373 -0.0925 0.578 4.04683566754971 25.9559822354158 -0.0925 0.578 0.393836926225699 0.00253747502525002 -0.926071755436413 5.2831190887614 P19338 NCL P19338.S34.p_NCL P19338_S28sS34s_2_2_28_34 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20178.20178.5 28.6 28.6 3.32 4 2 2 0 1028.6749 4979.3843 S28s S34s TMT10 17 (K) MAPPPKEVEEDsEDEEMsEDEEDDSSGEEVVIPQKK (G) MAPPPKEVEEDS(0.99)EDEEMS(0.99)EDEEDDS(0.0)S(0.0)GEEVVIPQKK K:TMT10,s:Phosphorylated S NCL 76670.1 9 23 114.1 570.88 HUMAN 2 -4.0468 25.956 DSEDKLFSPVIARNL-p Q5VZ89-7;S1274-p DSEDKLFSPVIARNL 0.0637766653547669 0.0549350907862547 -0.446 -0.300333333333333 25.8093181587364 16.7936855290719 -0.446 -0.300333333333333 0.00262463057739116 0.0209233609469986 -5.25171601268784 -3.21969286130091 Q5VZ89 DENND4C Q5VZ89.7.S1274.p_DENND4C Q5VZ89-7_S1274s _1_1_1274_1274 Q5VZ89-7 Q5VZ89-7|Q5VZ89-3|Q5VZ89-5 Isoform 2 of DENN domain-containing protein 4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24619.24619.2 10.4 10.4 99 1 1 1 0 606.3426 1131.7087 S1274s TMT10 1272 (K) LFsPVIAR (N) LFS(1.0)PVIAR s:Phosphorylated S DENND4C 220154.2 2 16 116.1 565.52 HUMAN 1 -25.8093 -16.7937 DSEEEAASPEGKRVP-p Q9HB96;S210-p DSEEEAASPEGKRVP 0.893317056675265 0.352824505264303 0.0213333333333333 -0.104 0.957708678114474 5.99749305516721 0.0213333333333333 -0.104 0.802101137413511 0.251333682492366 0.263236190770418 -1.28381168864809 Q9HB96 FANCE Q9HB96.S210.p_FANCE Q9HB96_S210s _1_1_210_210 Q9HB96 Q9HB96 Fanconi anemia group E protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4596.4596.4 15.32 15.32 15.324 2 1 1 0 575.7982 2220.2075 S210s TMT10 201 (R) RKDSEEEAAsPEGK (R) RKDS(0.0)EEEAAS(0.99)PEGK K:TMT10,s:Phosphorylated S FANCE 59451.6 4 2 2163.1 94.82 HUMAN 1 0.9577 -5.9975 DSEEEFGSERDEYRE-p Q12873-3;S138-p DSEEEFGSERDEYRE 0.673766097557541 0.478170412362545 0.0643333333333333 0.104333333333333 3.21448807449738 4.27467722342008 0.0643333333333333 0.104333333333333 0.477036041525531 0.373707899088708 0.763650497045186 0.969111059346127 Q12873 CHD3 Q12873.3.S138.p_CHD3 Q12873-3_S138s _1_1_138_138 Q12873-3 Q12873-3|Q12873-2 Isoform 3 of Chromodomain-helicase-DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8472.8472.4 14.03 14.03 4.119 3 1 1 0 636.5395 2463.1676 S138s TMT10 131 (R) DSEEEFGsERDEYREK (S) DS(0.0)EEEFGS(0.99)ERDEY(0.0)REK K:TMT10,s:Phosphorylated S CHD3 234573.2 4 41 49.3 753.68 HUMAN 1 3.2145 4.2747 DSEEQDKSRDEDNDE-p Q9NRF9;S122-p DSEEQDKSRDEDNDE 0.487566830417498 0.0128618845294122 -0.311333333333333 -0.408666666666667 5.74888136226482 26.3384130529341 -0.311333333333333 -0.408666666666667 0.266141048660816 0.00232358569820543 -1.23969678099991 -5.38374658522475 Q9NRF9 POLE3 Q9NRF9.S122.p_POLE3 Q9NRF9_S122s _1_1_122_122 Q9NRF9 Q9NRF9 DNA polymerase epsilon subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11125.11125.5 13.24 13.24 1.148 3 1 1 0 1105.6926 5444.4787 S122s TMT10 111 (K) DKKTDSEEQDKsRDEDNDEDEERLEEEEQNEEEEVDN (-) DKKT(0.0)DS(0.0)EEQDKS(0.99)RDEDNDEDEERLEEEEQNEEEEVDN K:TMT10,s:Phosphorylated S POLE3 16916.3 3 2 2808.1 69.83 HUMAN 1 -5.7489 -26.3384 DSEGEEKSDGELVVL-p Q9UN79;S613-p DSEGEEKSDGELVVL 0.109591803903204 0.00360332108061802 -0.315333333333333 -0.672666666666667 20.1039517246443 36.3437483397218 -0.315333333333333 -0.672666666666667 0.00976348419427262 0.000232073293702971 -3.90129512432301 -8.60230257184612 Q9UN79 SOX13 Q9UN79.S613.p_SOX13 Q9UN79_S613s _1_1_613_613 Q9UN79 Q9UN79 Transcription factor SOX-13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25382.25382.2 7.02 7.02 7.022 2 1 1 0 678.8287 1276.6834 S613s TMT10 613 (K) sDGELVVLTD (-) S(0.99)DGELVVLT(0.0)D s:Phosphorylated S SOX13 69740.6 1 10 1036.1 185.73 HUMAN 1 -20.104 -36.3437 DSEIKHSTPSPTRYS-p P49792;T779-p DSEIKHSTPSPTRYS 0.905774300473971 0.362889317411712 -0.0193333333333333 -0.0936666666666667 0.843781123561446 5.83719473627244 -0.0193333333333333 -0.0936666666666667 0.823420903064865 0.260783750179593 -0.234220064954907 -1.25521529988945 P49792 RANBP2 P49792.T779.p_RANBP2 P49792_T779tS781s_2_2_779_781 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12084.12084.5 13.63 13.63 1.134 9 2 2 0 650.7291 3089.6834 T779t S781s TMT10 770 (R) NADSEIKHStPsPTRYSLSPSK (S) NADS(0.0)EIKHS(0.0)T(0.99)PS(0.99)PT(0.0)RY(0.0)S(0.0)LS(0.0)PS(0.0)K K:TMT10,t:Phosphorylated T,s:Phosphorylated S RANBP2 362585.9 13 71 9.1 1298.62 HUMAN 1 -0.8438 -5.8372 DSEIRYLSADSGDAD-p Q15361;S478-p DSEIRYLSADSGDAD 0.434272682849394 0.0113589180573693 0.122333333333333 0.451333333333333 6.67261525408772 27.2236267458698 0.122333333333333 0.451333333333333 0.215148575316448 0.00189512266394746 1.40357554556644 5.62206412244555 Q15361 TTF1 Q15361.S478.p_TTF1 Q15361_S478sS481sS487s_3_3_478_487 Q15361 Q15361 Transcription termination factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19215.19215.5 19.79 19.79 1.99 7 3 3 0 1150.9072 5510.6108 S478s S481s S487s TMT10 450 (K) HVQEAPRLEPANEEHNVETAEDSEIRYLsADsGDADDsDADLGSAVK (Q) HVQEAPRLEPANEEHNVET(0.0)AEDS(0.0)EIRY(0.0)LS(0.99)ADS(0.99)GDADDS(0.99)DADLGS(0.0)AVK K:TMT10,s:Phosphorylated S TTF1 103505.6 1 9 1295.1 156.82 HUMAN 1 6.6726 27.2236 DSESSQGSLELLSYE-p B2RTY4-5;S1094-p DSESSQGSLELLSYE 0.990440674560662 0.36785291790829 0.002 0.100666666666667 0.085864726007428 5.7591222722457 0.00200000000000001 0.100666666666667 0.980423082335106 0.265514212335153 0.0256930398764829 1.24124758534422 B2RTY4 MYO9A B2RTY4.5.S1094.p_MYO9A B2RTY4-5_S1094s _1_1_1094_1094 B2RTY4-5 B2RTY4|B2RTY4-2|H3BRD5|B2RTY4-5|H3BMM1 Isoform 5 of Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21695.21695.3 13.87 13.87 2.463 8 1 1 0 970.4625 2829.4042 S1094s TMT10 1084 (R) GTPDSESSQGsLELLSYEESQK (S) GT(0.0)PDS(0.0)ES(0.0)S(0.0)QGS(0.99)LELLS(0.0)Y(0.0)EES(0.0)QK K:TMT10,s:Phosphorylated S MYO9A 267577.4 1 9 457.1 306.95 HUMAN 1 0.0859 5.7591 DSEVEEESPGKRLDA-p O95696-2;S945-p DSEVEEESPGKRLDA 0.0381647863081707 0.49002122730762 0.739333333333333 -0.14 32.3092535622929 4.14134674952905 0.739333333333334 -0.14 0.000587590335137449 0.385358839151638 7.1666709186244 -0.943889500682914 O95696 BRD1 O95696.2.S945.p_BRD1 O95696-2_S945s _1_1_945_945 O95696-2 O95696-2 Isoform 2 of Bromodomain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16354.16354.4 9.74 9.74 1.219 5 1 1 0 884.422 3454.6909 S945s TMT10 934 (R) STCGDSEVEEEsPGKRLDAGLTNGFGGAR (S) S(0.0)T(0.0)CGDS(0.0)EVEEES(0.99)PGKRLDAGLT(0.0)NGFGGAR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRD1 135466.1 1 9 1002.1 189.89 HUMAN 1 32.3093 -4.1413 DSFFLDLSCEKSNPK-p O15381;S191-p DSFFLDLSCEKSNPK 0.24468390094228 0.00171172425216625 -0.280666666666667 -0.92 11.6942818662914 43.9066578525863 -0.280666666666667 -0.92 0.0676973725601372 4.06756231215169e-05 -2.27822316073303 -12.0362224796941 O15381 NVL O15381.S191.p_NVL O15381_S191s _1_1_191_191 O15381 O15381|O15381-2|E9PH71 Nuclear valosin-containing protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28643.28643.3 14.02 14.02 14.023 2 1 1 0 633.6387 1818.9348 S191s TMT10 184 (K) DSFFLDLsCEK (S) DS(0.0)FFLDLS(0.99)CEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NVL 96076.2 2 3 2878.1 67.49 HUMAN 1 -11.6943 -43.9067 DSFGQIGSPPVPEND-p Q8TCX1-2;S270-p DSFGQIGSPPVPEND 0.31567881849184 0.0456930495418093 -0.193666666666667 0.286666666666667 9.37259252181572 17.9310105944273 -0.193666666666667 0.286666666666667 0.1155422306697 0.01610270884818 -1.8728820648379 3.44550948834159 Q8TCX1 DYNC2LI1 Q8TCX1.2.S270.p_DYNC2LI1 Q8TCX1-2_S270s _1_1_270_270 Q8TCX1-2 Q8TCX1-2|Q8TCX1-3 Isoform 2 of Cytoplasmic dynein 2 light intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33596.33596.5 23.38 23.38 2.282 4 1 1 0 877.0598 4301.3095 S270s TMT10 247 (K) SICVDQNKPLFITAGLDSFGQIGsPPVPENDIGK (L) S(0.0)ICVDQNKPLFIT(0.0)AGLDS(0.0)FGQIGS(0.99)PPVPENDIGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DYNC2LI1 39923.2 2 1 5066.1 23.38 HUMAN 1 -9.3726 17.931 DSFNDVGSDNSNQSS-p Q9NQ86-4;S61-p DSFNDVGSDNSNQSS 0.625698374773997 0.626026907213467 -0.0693333333333333 -0.066 3.78231272102453 2.76753641773685 -0.0693333333333334 -0.066 0.418570606991467 0.5287451030795 -0.875282874361563 -0.672697146653475 Q9NQ86 TRIM36 Q9NQ86.4.S61.p_TRIM36 Q9NQ86-4_S61s _1_1_61_61 Q9NQ86-4 Q9NQ86|Q9NQ86-4 Isoform 4 of E3 ubiquitin-protein ligase TRIM36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30747.30747.3 26.85 26.85 3.383 6 1 1 0 978.1191 2852.3747 S61s TMT10 47 (K) ELLLTLDDSFNDVGsDNSNQSSPR (L) ELLLT(0.0)LDDS(0.0)FNDVGS(0.99)DNS(0.0)NQS(0.0)S(0.0)PR s:Phosphorylated S TRIM36 83165.6 2 2 1499.1 136.16 HUMAN 1 -3.7823 -2.7675 DSFNTFFSETGAGKH-p P68363;S54-p DSFNTFFSETGAGKH 0.278318764774886 0.174335452965156 -0.290666666666667 0.182333333333333 10.5067129103931 9.97717195898303 -0.290666666666667 0.182333333333333 0.0889874391475413 0.100527018954276 -2.06989801513619 1.97694730474162 P68363 TUBA1B P68363.S54.p_TUBA1B P68363_S54s _1_1_54_54 P68363 F5H5D3|Q71U36|P68363|Q13748|Q6PEY2|Q9BQE3|Q13748-2|Q71U36-2|P68363-2|A0A1W2PQM2|F8W0F6|F8VS66 Tubulin alpha-1B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26954.26954.4 18.59 18.59 1.145 5 1 1 0 637.3008 2466.2189 S54s TMT10 41 (K) TIGGGDDSFNTFFsETGAGK (H) T(0.0)IGGGDDS(0.0)FNT(0.0)FFS(0.99)ET(0.0)GAGK K:TMT10,s:Phosphorylated S TUBA1B 50835.4 4 4 868.1 210.03 HUMAN 1 -10.5067 9.9772 DSGDADDSDADLGSA-p Q15361;S487-p DSGDADDSDADLGSA 0.405906564884755 0.389994302378838 0.132666666666667 0.102333333333333 7.22913221804859 5.43835279786527 0.132666666666667 0.102333333333333 0.189272177350972 0.285867458247715 1.50106499496964 1.18355919623073 Q15361 TTF1 Q15361.S487.p_TTF1 Q15361_S487s _1_1_487_487 Q15361 Q15361 Transcription termination factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15446.15446.2 19.51 19.51 1.688 5 1 1 0 1191.0164 2301.0568 S487s Hydrogen 476 (R) YLSADSGDADDsDADLGSAVK (Q) Y(0.0)LS(0.0)ADS(0.0)GDADDS(0.99)DADLGS(0.0)AVK K:TMT10-Lys-Only,s:Phosphorylated S TTF1 103505.6 3 4 1295.1 156.82 HUMAN 1 7.2291 5.4384 DSGDDFASDGSSSRE-p Q92805;S47-p DSGDDFASDGSSSRE 0.696853109927181 0.0350379532419149 0.0713333333333333 0.449666666666667 2.94672063477242 19.5945967154908 0.0713333333333333 0.449666666666667 0.507373682419149 0.0109784323092254 0.709569727684262 3.78902739893299 Q92805 GOLGA1 Q92805.S47.p_GOLGA1 Q92805_S41sS47sS50s_3_3_41_50 Q92805 Q92805 Golgin subfamily A member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25959.25959.3 10.18 10.18 1.205 9 3 3 0 1215.8253 3405.555 S41s S47s S50s TMT10 32 (K) ESVASMGADsGDDFAsDGsSSREDLSSQLLR (R) ES(0.0)VAS(0.0)MGADS(0.99)GDDFAS(0.99)DGS(0.99)S(0.0)S(0.0)REDLS(0.0)S(0.0)QLLR s:Phosphorylated S GOLGA1 88297 1 7 1691.1 120.73 HUMAN 1 2.9467 19.5946 DSGDKRWSGNEPTDE-p Q96II8-2;S324-p DSGDKRWSGNEPTDE 0.055786125949693 0.170111781453783 -0.504666666666667 0.146333333333333 27.3352190142704 10.1144363098904 -0.504666666666667 0.148397587429568 0.00184704764613387 0.0973994196160229 -5.66058376006378 2.00077960711936 Q96II8 LRCH3 Q96II8.2.S324.p_LRCH3 Q96II8-2_S324s _1_1_324_324 Q96II8-2 Q96II8-2|Q96II8-4|Q96II8-3|E9PD99 Isoform 2 of Leucine-rich repeat and calponin homology domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28035.28035.4 19.32 19.32 5.463 4 1 1 0 800.4131 3118.6573 S324s TMT10 322 (K) RWsGNEPTDEFSDLPLRVAEITK (E) RWS(0.99)GNEPT(0.0)DEFS(0.0)DLPLRVAEIT(0.0)K K:TMT10,s:Phosphorylated S LRCH3 90369.5 8 4 1119.1 175.39 HUMAN 1 -27.3352 10.1144 DSGDRAASPAGPRKS-p Q6NV74;S646-p DSGDRAASPAGPRKS 0.146976160241291 0.686510161416552 0.327 0.0413333333333334 16.9109878458854 2.23589331156677 0.327 0.0413333333333333 0.0203657878496796 0.597600110131508 3.2451235859274 0.560362997445356 Q6NV74 KIAA1211L Q6NV74.S646.p_KIAA1211L Q6NV74_S646s _1_1_646_646 Q6NV74 Q6NV74 Uncharacterized protein KIAA1211-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5315.5315.4 15.53 11.51 3.557 2 1 1 0 669.352 2594.4163 S646s TMT10 631 (R) KLAERGPQDSGDRAAsPAGPR (K) KLAERGPQDS(0.0)GDRAAS(0.99)PAGPR K:TMT10,s:Phosphorylated S KIAA1211L 102725.9 5 7 756.1 230.87 HUMAN 1 16.911 2.2359 DSGFTIVSPLDI___-p Q92609-2;S813-p DSGFTIVSPLDI___ 0.189369782273392 0.751171759683228 -0.219 -0.0376666666666667 14.15434170586 1.7175074619818 -0.219 -0.0376666666666667 0.0384207492102144 0.673363007348484 -2.72130013063234 -0.445242507282953 Q92609 TBC1D5 Q92609.2.S813.p_TBC1D5 Q92609-2_S813s _1_1_813_813 Q92609-2 Q92609-2 Isoform 2 of TBC1 domain family member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35223.35223.2 8.01 8.01 8.014 3 1 1 0 786.8924 1492.8096 S813s TMT10 806 (K) DSGFTIVsPLDI (-) DS(0.0)GFT(0.0)IVS(0.99)PLDI s:Phosphorylated S TBC1D5 91784.7 1 12 328.1 359.68 HUMAN 1 -14.1543 -1.7175 DSGNWDTSGSELSEG-p O75400;S933-p DSGNWDTSGSELSEG 0.97890490108253 0.833095117127723 -0.005 -0.0463333333333333 0.182798539160146 1.11074596589276 -0.00500000000000002 -0.0463333333333333 0.958782604930118 0.774328783800015 -0.0541185539281731 -0.301401600576915 O75400 PRPF40A O75400.S933.p_PRPF40A O75400_S933sS935sS938s_3_3_933_938 O75400 O75400|O75400-3|O75400-2 Pre-mRNA-processing factor 40 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20114.20114.3 13.76 13.76 1.142 6 3 3 0 1085.14 3013.5205 S933s S935s S938s TMT10 923 (K) TGKDSGNWDTsGsELsEGELEK (R) T(0.0)GKDS(0.0)GNWDT(0.0)S(0.99)GS(0.99)ELS(0.99)EGELEK K:TMT10,s:Phosphorylated S PRPF40A 109088.4 7 15 718.2 237.38 HUMAN 1 -0.1828 -1.1107 DSGPEGESSE_____-p Q8NBR0;S391-p DSGPEGESSE_____ 0.213251150765665 0.861839640259032 0.296666666666667 -0.0216666666666667 12.9394687465961 0.910312261358905 0.296666666666667 -0.0216666666666667 0.0508221607279916 0.810902751172792 2.50016521556937 -0.251202930544861 Q8NBR0 TP53I13 Q8NBR0.S391.p_TP53I13 Q8NBR0_S391sS392s_2_2_391_392 Q8NBR0 Q8NBR0 Tumor protein p53-inducible protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15962.15962.3 9.03 9.03 6.555 4 2 2 0 804.0337 2250.1564 S391s S392s TMT10 375 (R) RRPLLPPTPDSGPEGEssE (-) RRPLLPPT(0.0)PDS(0.0)GPEGES(0.99)S(0.99)E s:Phosphorylated S TP53I13 42750.4 3 3 5674.1 17.31 HUMAN 1 12.9395 -0.9103 DSGSKRWSGNESTDE-p O75427;S313-p DSGSKRWSGNESTDE 0.250689107676978 0.183313099831904 -0.193 -0.156333333333333 11.4650601602976 9.69280170629256 -0.193 -0.156333333333333 0.0713664319075792 0.107329678725626 -2.23779428629071 -1.92763283949151 O75427 LRCH4 O75427.S313.p_LRCH4 O75427_S313s _1_1_313_313 O75427 O75427 Leucine-rich repeat and calponin homology domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20768.20768.3 17.05 17.05 3.659 5 1 1 0 786.0207 2276.0781 S313s TMT10 311 (K) RWsGNESTDEFSELSFR (I) RWS(0.99)GNES(0.0)T(0.0)DEFS(0.0)ELS(0.0)FR s:Phosphorylated S LRCH4 74133.6 1 3 1458.1 140.35 HUMAN 1 -11.4651 -9.6928 DSGSNLTTDLIVQRI-p Q99447-3;T360-p DSGSNLTTDLIVQRI 0.408301044696458 0.00570552122578353 0.168666666666667 0.508666666666667 7.1776991719381 32.489596574186 0.168666666666667 0.508666666666667 0.1915270338242 0.000563690015814645 1.49208407006048 7.21413413082515 Q99447 PCYT2 Q99447.3.T360.p_PCYT2 Q99447-3_T360t _1_1_360_360 Q99447-3 Q99447-3|I3L1R7|Q99447-4|Q99447-2 Isoform 3 of Ethanolamine-phosphate cytidylyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20819.20819.3 20.28 20.28 1.486 4 1 1 0 690.3553 1989.0814 T360t TMT10 351 (R) QIDSGSNLTtDLIVQR (I) QIDS(0.0)GS(0.0)NLT(0.0)T(0.99)DLIVQR t:Phosphorylated T PCYT2 46135.1 3 2 4106.1 37.58 HUMAN 1 7.1777 32.4896 DSGSQLGSMGSLTMK-p Q96J02;S10-p DSGSQLGSMGSLTMK 0.451712086772319 0.408151337229227 0.1 0.078 6.37275796976777 5.18081655067077 0.1 0.078 0.230528276316576 0.303332081245143 1.35070634257519 1.1368559102969 Q96J02 ITCH Q96J02.S10.p_ITCH Q96J02_S10s _1_1_10_10 Q96J02 Q96J02|Q96J02-2 E3 ubiquitin-protein ligase Itchy homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23347.23347.3 15.35 15.35 2.25 6 1 1 0 646.2891 1856.8931 S10s Acetyl 2 (M) SDSGSQLGsMGSLTMK (S) S(0.0)DS(0.0)GS(0.0)QLGS(0.99)MGS(0.0)LT(0.0)MK K:TMT10,s:Phosphorylated S ITCH 103656.7 2 3 2298.1 89.16 HUMAN 1 6.3728 5.1808 DSGSRRRSPGLCSDS-p Q5VUA4;S136-p DSGSRRRSPGLCSDS 0.635608625096181 0.152863537188989 0.068 0.146 3.67040851639018 10.7287413468035 0.068 0.146 0.429496024589584 0.0845523855665593 0.853579162057178 2.10772879654639 Q5VUA4 ZNF318 Q5VUA4.S136.p_ZNF318 Q5VUA4_S136s _1_1_136_136 Q5VUA4 Q5VUA4|Q5VUA4-2 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12452.12452.2 18.49 18.49 9.407 3 1 1 0 751.3444 1421.7144 S136s Hydrogen 136 (R) sPGLCSDSLEK (S) S(0.99)PGLCS(0.0)DS(0.0)LEK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S ZNF318 252762.4 9 4 37.1 870.88 HUMAN 1 3.6704 10.7287 DSHKRKGSPCDTLAS-p Q15788;S22-p DSHKRKGSPCDTLAS 0.941601783060378 0.00799796474312343 -0.0123333333333333 0.464333333333333 0.513048795236674 29.8934652318119 -0.0123333333333333 0.464333333333334 0.888577107907346 0.00102483388589109 -0.146836047216274 6.38969475325147 Q15788 NCOA1 Q15788.S22.p_NCOA1 Q15788_S22s _1_1_22_22 Q15788 Q15788|Q15788-3|Q15788-2 Nuclear receptor coactivator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10767.10767.3 15.45 15.45 2.122 5 1 1 0 750.0544 2168.1836 S22s TMT10 20 (R) KGsPCDTLASSTEK (R) KGS(0.99)PCDT(0.0)LAS(0.0)S(0.0)T(0.0)EK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NCOA1 158066.1 6 1 1320.1 154.47 HUMAN 1 -0.513 29.8935 DSHQSQESPNLENIA-p Q96JQ2;S841-p DSHQSQESPNLENIA 0.481577279141267 0.210212972618213 0.176 0.164666666666667 5.83980176971247 8.90995264134599 0.176 0.164666666666667 0.2606272508535 0.128530067572799 1.2559725398358 1.7921375882329 Q96JQ2 CLMN Q96JQ2.S841.p_CLMN Q96JQ2_S841s_1_1_841_841 Q96JQ2 Q96JQ2 Calmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23514.23514.4 16.04 16.04 1.885 4 1 1 0 955.4464 3737.7965 S841s N849n TMT10 829 (K) ENDPMDSHQSQEsPNLENIAnPLEENVTK (E) EN(0.0)DPMDS(0.0)HQS(0.0)QES(0.99)PN(0.0)LEN(0.0)IAN(0.99)PLEEN(0.0)VT(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated CLMN 112105.2 1 13 726.1 236.61 HUMAN 1 5.8398 8.91 DSHSAEDSEDEKEDH-p Q9H1E3;S79-p DSHSAEDSEDEKEDH 0.508483932512896 0.00580340265533485 -0.125 0.955 5.42124899931209 32.3323762733232 -0.125 0.955 0.286995508513853 0.000584470199588428 -1.18072469075935 7.16183216566577 Q9H1E3 NUCKS1 Q9H1E3.S79.p_NUCKS1 Q9H1E3_S79s _1_1_79_79 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4411.4411.3 20.26 17.74 3.413 3 1 1 0 914.0772 2660.2527 S79s TMT10 71 (K) DDSHSAEDsEDEKEDHK (N) DDS(0.0)HS(0.0)AEDS(0.99)EDEKEDHK K:TMT10,s:Phosphorylated S NUCKS1 27295.9 16 9 48.1 767.83 HUMAN 1 -5.4212 32.3324 DSIEDPNSPAGRRHL-p Q86VS8;S238-p DSIEDPNSPAGRRHL 0.383617908533383 0.741251885015411 0.213333333333333 -0.0503333333333333 7.70299980541181 1.7927283770314 0.213333333333333 -0.0503333333333333 0.169707102842736 0.661800608737576 1.58359269176172 -0.46234304942924 Q86VS8 HOOK3 Q86VS8.S238.p_HOOK3 Q86VS8_S238s _1_1_238_238 Q86VS8 Q86VS8 Protein Hook homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8719.8719.3 18 13.71 3.811 3 1 1 0 722.3457 2085.0522 S238s TMT10 227 (R) LNQSDSIEDPNsPAGRR (H) LNQS(0.0)DS(0.0)IEDPNS(0.99)PAGRR s:Phosphorylated S HOOK3 83523.8 2 1 4272.1 34.42 HUMAN 1 7.703 -1.7927 DSIGETPTPGASKRK-p O75533;T328-p DSIGETPTPGASKRK 0.825130077485234 0.2594077397734 0.033 0.188 1.61036280829657 7.71983739738121 0.033 0.188 0.690182143824291 0.169050422401274 0.42067417681331 1.58603463818567 O75533 SF3B1 O75533.T328.p_SF3B1 O75533_T326tT328t_2_2_326_328 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8911.8911.3 14.56 14.56 3.631 5 2 2 0 788.7026 2204.1559 T326t T328t TMT10 316 (R) TDRGGDSIGEtPtPGASK (R) T(0.0)DRGGDS(0.0)IGET(0.99)PT(0.99)PGAS(0.0)K K:TMT10,t:Phosphorylated T SF3B1 146569.5 9 40 53.1 735.77 HUMAN 2 1.6104 7.7198 DSIKELDSLSKVKND-p Q9BYW2;S654-p DSIKELDSLSKVKND 0.145152146047681 0.100088196839069 -0.272333333333333 -0.237333333333333 17.0744392324875 13.2097877315714 -0.272333333333333 -0.237333333333333 0.019613544121336 0.0477552614241093 -3.27731065448783 -2.54751439138302 Q9BYW2 SETD2 Q9BYW2.S654.p_SETD2 Q9BYW2_S654s _1_1_654_654 Q9BYW2 Q9BYW2 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14769.14769.2 8.02 8.02 2.268 2 1 1 0 665.3584 1249.7404 S654s TMT10 651 (K) ELDsLSK (V) ELDS(0.99)LS(0.0)K K:TMT10,s:Phosphorylated S SETD2 290615.4 1 9 58.1 711.11 HUMAN 1 -17.0744 -13.2098 DSILIIPTPDEEEKI-p P17028;T16-p DSILIIPTPDEEEKI 0.619048690232379 0.161520336645036 0.083 0.163666666666667 3.8704021115529 10.4114649719497 0.083 0.163666666666667 0.410166124108279 0.0909606390395202 0.89227438819595 2.05242676932868 P17028 ZNF24 P17028.T16.p_ZNF24 P17028_T16t _1_1_16_16 P17028 P17028|P17028-2 Zinc finger protein 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31372.31372.3 15.28 15.28 2.379 4 1 1 0 894.0967 2600.3028 T16t Acetyl 2 (M) SAQSVEEDSILIIPtPDEEEK (I) S(0.0)AQS(0.0)VEEDS(0.0)ILIIPT(0.99)PDEEEK K:TMT10,t:Phosphorylated T ZNF24 42782.2 1 4 2565.1 78.32 HUMAN 1 3.8704 10.4115 DSITKSISSPSVSSE-p P49792;S2804-p DSITKSISSPSVSSE 0.124416463687995 0.0266367623553881 -0.366 -0.37 18.8296323282944 21.3709437492864 -0.366 -0.37 0.0130929276242901 0.00729299011761198 -3.63215667415727 -4.17529009135955 P49792 RANBP2 P49792.S2804.p_RANBP2 P49792_S2804s _1_1_2804_2804 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17063.17063.4 17.07 11.47 1.103 9 1 1 0 780.4152 3038.6647 S2804s TMT10 2802 (K) SIsSPSVSSETMDKPVDLSTRK (E) S(0.0)IS(0.99)S(0.0)PS(0.0)VS(0.0)S(0.0)ET(0.0)MDKPVDLS(0.0)T(0.0)RK K:TMT10,s:Phosphorylated S RANBP2 362585.9 4 65 9.1 1298.62 HUMAN 1 -18.8296 -21.3709 DSKAGWGSPCHLSGE-p Q7Z5J4;S916-p DSKAGWGSPCHLSGE 0.486766168898128 0.821968077399468 0.0946666666666667 -0.024 5.75980369976756 1.19195331123576 0.0946666666666667 -0.024 0.265472555232484 0.75998438451804 1.24165394588261 -0.321325695992428 Q7Z5J4 RAI1 Q7Z5J4.S916.p_RAI1 Q7Z5J4_S916s _1_1_916_916 Q7Z5J4 Q7Z5J4|Q7Z5J4-2|A0A1W2PQJ7|Q7Z5J4-3|Q7Z5J4-4 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27762.27762.4 21.46 21.46 2.291 6 1 1 0 795.1569 3097.6392 S916s TMT10 912 (K) AGWGsPCHLSGESVILLGPTVGTESK (V) AGWGS(0.99)PCHLS(0.0)GES(0.0)VILLGPT(0.0)VGT(0.0)ES(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RAI1 206315.3 2 8 142.1 522.21 HUMAN 1 5.7598 -1.192 DSKLKKLSEDSLTKQ-p Q13188-2;S43-p DSKLKKLSEDSLTKQ 0.0682360103399981 0.0145497038675128 -0.562 0.527 25.1779858377846 25.4515155915042 -0.562 0.527 0.00303529856247745 0.00285002349889202 -5.08899682274674 5.15246545189079 Q13188 STK3 Q13188.2.S43.p_STK3 Q13188-2_S43s _1_1_43_43 Q13188-2 Q13188-2|A0A087WZ06|Q8NBU1|E5RIM6 Isoform 2 of Serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13757.13757.3 10.29 10.29 1.227 3 1 1 0 596.6757 1708.046 S43s TMT10 41 (K) KLsEDSLTK (Q) KLS(0.99)EDS(0.0)LT(0.0)K K:TMT10,s:Phosphorylated S STK3 59803 1 4 1088.1 179.29 HUMAN 1 -25.178 25.4515 DSKQDLLSHEQKGRY-p Q02383;S539-p DSKQDLLSHEQKGRY 0.388473924463755 0.00344325143052596 -0.135 0.631666666666667 7.59777248807206 36.8103524357155 -0.135 0.631666666666667 0.173869238162956 0.000208432173076901 -1.56529652149869 8.78517886139623 Q02383 SEMG2 Q02383.S539.p_SEMG2 Q02383_S539s _1_1_539_539 Q02383 Q02383 Semenogelin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11748.11748.2 9.31 5.73 99 1 1 1 0 703.8475 1326.7215 S539s Hydrogen 535 (K) QDLLsHEQK (G) QDLLS(1.0)HEQK K:TMT10-Lys-Only,s:Phosphorylated S SEMG2 65557.4 1 1 6817.1 9.31 HUMAN 1 -7.5978 36.8104 DSLEEAGSPAPGPCP-p Q8TBB5;S424-p DSLEEAGSPAPGPCP 0.10298015645821 0.422025071062289 0.452333333333333 -0.142 20.8445180593707 4.98727797054498 0.452333333333333 -0.142 0.00823281192132683 0.317155467694985 4.06258303224388 -1.10150405444174 Q8TBB5 KLHDC4 Q8TBB5.S424.p_KLHDC4 Q8TBB5_S424s _1_1_424_424 Q8TBB5 Q8TBB5|Q8TBB5-3|Q8TBB5-2 Kelch domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10791.10791.3 21.07 21.07 5.486 3 1 1 0 803.6766 2329.0452 S424s TMT10 413 (R) SEDEDSLEEAGsPAPGPCPR (S) S(0.0)EDEDS(0.0)LEEAGS(0.99)PAPGPCPR C:Carbamidomethylation,s:Phosphorylated S KLHDC4 58289.9 1 4 3120.1 60.27 HUMAN 1 20.8445 -4.9873 DSLGAYASQDANEQG-p Q9C0C2;S899-p DSLGAYASQDANEQG 0.250424865777543 0.0400086096681997 -0.192 -0.327666666666667 11.4781895320795 18.7429958021612 -0.192 -0.327666666666667 0.0711510063053039 0.0133567383893753 -2.24010683228644 -3.6111141898014 Q9C0C2 TNKS1BP1 Q9C0C2.S899.p_TNKS1BP1 Q9C0C2_S893sS899s_2_2_893_899 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23017.23017.5 11.51 11.51 3.036 4 2 2 0 892.8279 4300.1838 S893s S899s TMT10 880 (R) DVSLGDWEFGKRDsLGAYAsQDANEQGQDLGKR (D) DVS(0.0)LGDWEFGKRDS(0.99)LGAY(0.0)AS(0.99)QDANEQGQDLGKR K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 1 79 4.1 2105.7 HUMAN 1 -11.4782 -18.743 DSLIDSLT_______-p P56537;T245-p DSLIDSLT_______ 0.275421456675328 0.244171049905221 0.158333333333333 0.151666666666667 10.5993625267288 8.06848276878012 0.158333333333333 0.151666666666667 0.0871091442549701 0.156009743609591 2.08606033700602 1.64651190632115 P56537 EIF6 P56537.T245.p_EIF6 P56537_T245t _1_1_245_245 P56537 P56537|P56537-2 Eukaryotic translation initiation factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28024.28024.2 17.11 17.11 1.121 7 1 1 0 1336.655 2592.3388 T245t TMT10 224 (K) LNEAQPSTIATSMRDSLIDSLt (-) LNEAQPS(0.0)T(0.0)IAT(0.0)S(0.0)MRDS(0.0)LIDS(0.0)LT(0.99) t:Phosphorylated T EIF6 27112.1 3 5 2512.1 80.42 HUMAN 1 10.5994 8.0685 DSLILEKSQNWSSQK-p A0A0U1RRH6;S308-p DSLILEKSQNWSSQK 0.372999967794591 0.0293234840218342 -0.385666666666667 -0.457666666666667 7.94486687767544 20.7467103765457 -0.385666666666667 -0.457666666666667 0.160514145901845 0.00842032709437164 -1.62559499905008 -4.03710772169651 A0A0U1RRH6 NotFound A0A0U1RRH6.S308.p_NotFound A0A0U1RRH6_S308s _1_1_308_308 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18965.18965.4 18.64 18.64 2.827 5 1 1 0 715.8721 2780.5034 S308s TMT10 298 (K) SNEDSLILEKsQNWSSQK (M) S(0.0)NEDS(0.0)LILEKS(0.99)QNWS(0.0)S(0.0)QK K:TMT10,s:Phosphorylated S PHF14 109152.4 4 12 126.1 543.2 HUMAN 1 -7.9449 -20.7467 DSLKKIDSPPIRRST-p Q7Z6B7;S932-p DSLKKIDSPPIRRST 0.703545989174049 0.769477678187172 -0.074 -0.0356666666666667 2.87094687815045 1.57315107309087 -0.074 -0.0356666666666667 0.516303788961909 0.69612125212853 -0.694076007378923 -0.412007233729925 Q7Z6B7 SRGAP1 Q7Z6B7.S932.p_SRGAP1 Q7Z6B7_S932s _1_1_932_932 Q7Z6B7 Q7Z6B7|Q7Z6B7-2|G5EA48 SLIT-ROBO Rho GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8800.8800.3 8.47 8.47 99 1 1 1 0 421.5655 1182.7156 S932s TMT10 930 (K) IDsPPIRR (S) IDS(1.0)PPIRR s:Phosphorylated S SRGAP1 125175 3 6 1722.1 119.46 HUMAN 1 -2.8709 -1.5732 DSLKKNKSEDGFGTK-p Q71F56;S747-p DSLKKNKSEDGFGTK 0.154613203240464 0.00617809962990684 -0.246333333333333 -0.588666666666667 16.2925047299527 31.8402239051173 -0.246333333333333 -0.588666666666667 0.0234827809515518 0.000654602424476375 -3.12455762984994 -7.00015000841195 Q71F56 MED13L Q71F56.S747.p_MED13L Q71F56_S747s _1_1_747_747 Q71F56 Q71F56 Mediator of RNA polymerase II transcription subunit 13-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9816.9816.3 11.48 11.48 3.365 2 1 1 0 617.3267 1770.0001 S747s TMT10 745 (K) NKsEDGFGTK (D) NKS(0.99)EDGFGT(0.0)K K:TMT10,s:Phosphorylated S MED13L 245507 1 7 415.1 321.44 HUMAN 1 -16.2925 -31.8402 DSLQRQLSIALPQEF-p O75145;S75-p DSLQRQLSIALPQEF 0.909874857971449 0.522772645013113 -0.017 -0.0863333333333333 0.804981699293739 3.78420975258208 -0.017 -0.0863333333333333 0.830810219640192 0.418387812070713 -0.224218377836672 -0.875507135844557 O75145 PPFIA3 O75145.S75.p_PPFIA3 O75145_S75s_1_1_75_75 O75145 O75145|O75145-2|R4GN36 Liprin-alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.38272.38272.2 17.43 15.17 17.426 2 1 1 0 961.5173 1859.084 Q73q S75s Hydrogen 73 (R) qLsIALPQEFAALTK (E) Q(1.0)LS(0.99)IALPQEFAALT(0.0)K K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S PPFIA3 134064.6 5 2 248.2 410.18 HUMAN 1 -0.805 -3.7842 DSLQVPVSPSSTTSS-p Q9Y2D5-4;S383-p DSLQVPVSPSSTTSS 0.625942380562294 0.038853936371035 -0.0746666666666667 -0.266 3.77951982691723 18.9394853845137 -0.0746666666666667 -0.267881345505429 0.418839871143631 0.0127659006887228 -0.874742829971269 -3.65176991123169 Q9Y2D5 AKAP2 Q9Y2D5.4.S383.p_AKAP2 Q9Y2D5-4_S383s _1_1_383_383 Q9Y2D5-4 Q9Y2D5-4|Q9Y2D5-6|Q9Y2D5-7|Q9Y2D5-5 Isoform 3 of A-kinase anchor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19379.19379.3 19.61 19.61 3.539 8 1 1 0 771.712 2233.1509 S383s TMT10 372 (R) DALGDSLQVPVsPSSTTSSR (C) DALGDS(0.0)LQVPVS(0.99)PS(0.0)S(0.0)T(0.0)T(0.0)S(0.0)S(0.0)R s:Phosphorylated S AKAP2 122582.3 3 10 779.1 226.39 HUMAN 1 -3.7795 -18.9395 DSLSDAGTYTIETEA-p J3KQR7;T570-p DSLSDAGTYTIETEA 0.980593512823283 0.113787833444952 -0.005 0.170333333333333 0.170039523265321 12.4480766933667 -0.00500000000000001 0.170333333333333 0.961603527205407 0.0569104907545646 -0.0504108198274856 2.41081635640141 J3KQR7 NotFound J3KQR7.T570.p_NotFound J3KQR7_S566sT570t_2_2_566_570 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17960.17960.4 16.34 16.34 1.181 7 2 2 0 1002.1973 3845.8453 S566s T570t Hydrogen 558 (R) KQEEDDSLsDAGtYTIETEAQDTEVEEARK (M) KQEEDDS(0.0)LS(0.99)DAGT(0.99)Y(0.0)T(0.0)IET(0.0)EAQDT(0.0)EVEEARK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T CEP170B 172326.6 5 36 51.1 746.11 HUMAN 2 -0.17 12.4481 DSLSRLRSPSVLEVR-p Q96QF0;S163-p DSLSRLRSPSVLEVR 0.270929433989002 0.00964313812951673 0.199666666666667 -0.63 10.7502028400975 28.4130190459515 0.199666666666667 -0.63 0.0841355844648769 0.00144111319751528 2.1124022788054 -5.95465305701118 Q96QF0 RAB3IP Q96QF0.S163.p_RAB3IP Q96QF0_S163s _1_1_163_163 Q96QF0 Q96QF0|Q96QF0-2 Rab-3A-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14992.14992.3 9.38 9.38 9.376 2 1 1 0 488.9419 1384.8474 S163s TMT10 161 (R) LRsPSVLEVR (E) LRS(0.99)PS(0.0)VLEVR s:Phosphorylated S RAB3IP 53704.9 1 2 1620.1 126.94 HUMAN 1 10.7502 -28.413 DSLSRYDSDGDKSDD-p H0YL70;S250-p DSLSRYDSDGDKSDD 0.270222206433935 0.202598044596765 -0.160333333333333 0.272666666666667 10.7697090526302 9.12223571196573 -0.160333333333333 0.272666666666667 0.0837585392695731 0.122398593924476 -2.11581142776544 1.82885696977695 H0YL70 TLE3 H0YL70.S250.p_TLE3 H0YL70_S250s _1_1_250_250 H0YL70 H0YL70|H0YKN8|Q04726-3|Q04726-7|Q04726-2|H0YNT2|F5H7D6|H0YLW9 Transducin-like enhancer protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8814.8814.3 10.35 10.35 3.628 4 1 1 0 632.63 1815.9125 S250s TMT10 243 (K) DSLSRYDsDGDK (S) DS(0.0)LS(0.0)RY(0.0)DS(0.99)DGDK K:TMT10,s:Phosphorylated S TLE3 85275.2 3 3 447.1 309.48 HUMAN 1 -10.7697 9.1222 DSLSTNSSDLVAPSP-p Q12888-2;S365-p DSLSTNSSDLVAPSP 0.357172198749098 0.0207742311053834 0.137 0.366666666666667 8.31038408058318 23.011326514092 0.137 0.366666666666667 0.147557603077416 0.00499881827172694 1.68896563271797 4.55200405845899 Q12888 TP53BP1 Q12888.2.S365.p_TP53BP1 Q12888-2_S365s _1_1_365_365 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25506.25718.3 19.96 19.96 1.241 7 1 1 0 905.7744 2635.3413 S365s TMT10 354 (R) SLVQDSLSTNSsDLVAPSPDAFR (S) S(0.0)LVQDS(0.0)LS(0.0)T(0.0)NS(0.0)S(0.99)DLVAPS(0.0)PDAFR s:Phosphorylated S TP53BP1 216167.2 6 16 3.1 2297.07 HUMAN 1 8.3104 23.0113 DSLTLSQSKSNEDSL-p A0A0U1RRH6;S296-p DSLTLSQSKSNEDSL 0.94478758147709 0.116227219397808 0.0136666666666667 0.178 0.483724844485868 12.329656283137 0.0136666666666667 0.178 0.894597160884936 0.0584836368446003 0.138840365820616 2.38971551335209 A0A0U1RRH6 NotFound A0A0U1RRH6.S296.p_NotFound A0A0U1RRH6_S296s _1_1_296_296 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18466.18466.3 9.3 9.3 1.295 6 1 1 0 869.0796 2525.2619 S296s TMT10 279 (R) NSADDEELTNDSLTLSQsK (S) NS(0.0)ADDEELT(0.0)NDS(0.0)LT(0.0)LS(0.0)QS(0.99)K K:TMT10,s:Phosphorylated S PHF14 109152.4 1 9 126.1 543.2 HUMAN 1 0.4837 12.3297 DSLWRRYSEFELLRS-p O95219;S108-p DSLWRRYSEFELLRS 0.421053324853859 0.0985242360660602 0.119 0.270666666666667 6.92052517107552 13.3047829176669 0.119 0.270666666666667 0.203211126280205 0.0467220304620565 1.44709426845773 2.56468819719539 O95219 SNX4 O95219.S108.p_SNX4 O95219_S108s _1_1_108_108 O95219 O95219 Sorting nexin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19447.19447.3 11.34 5.6 8.23 2 1 1 0 507.9265 1441.8001 S108s TMT10 106 (R) RYsEFELLR (S) RY(0.0)S(0.99)EFELLR s:Phosphorylated S SNX4 52193.2 1 2 3500.1 49.67 HUMAN 1 6.9205 13.3048 DSMDMDMSPLRPQNY-p P06748;S10-p DSMDMDMSPLRPQNY 0.59351749575714 0.00627124365275306 -0.087 0.478666666666667 4.17936008945049 31.7256106743407 -0.087 0.478666666666667 0.382000552507347 0.000672107795397989 -0.951262898450392 6.96293589431883 P06748 NPM1 P06748.S10.p_NPM1 P06748_S10s _1_1_10_10 P06748 P06748|P06748-2|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.38690.38940.3 21.28 21.28 2.33 3 1 1 0 1086.7994 3178.4225 S10s Acetyl 1 (-) MEDSMDMDMsPLRPQNYLFGCELK (A) MEDS(0.0)MDMDMS(0.99)PLRPQNY(0.0)LFGCELK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NPM1 32745.6 79 2 78.1 640.75 HUMAN 1 -4.1794 31.7256 DSMRQEQSPNANNDQ-p Q12830;S1251-p DSMRQEQSPNANNDQ 0.202247703341141 0.578119253417788 0.258 0.074 13.4728796231994 3.21110931873757 0.258 0.074 0.044948172372686 0.477407313894426 2.59663668783753 0.7628628232919 Q12830 BPTF Q12830.S1251.p_BPTF Q12830_S1251s _1_1_1251_1251 Q12830 Q12830|Q12830-2|Q12830-4 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15586.15586.4 27.92 30.4 2.536 7 1 1 0 1227.0532 4825.21 S1251s TMT10 1237 (K) AKEGCQSDSMRQEQsPNANNDQPEDLIQGCSESDSSVLR (M) AKEGCQS(0.0)DS(0.0)MRQEQS(0.99)PNANNDQPEDLIQGCS(0.0)ES(0.0)DS(0.0)S(0.0)VLR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BPTF 340995.1 8 11 94.1 610.41 HUMAN 1 13.4729 3.2111 DSMVMHNSDPNLHLL-p Q96TA1;S574-p DSMVMHNSDPNLHLL 0.885820345057877 0.00876639287088114 -0.023 0.547 1.03561212656103 29.1651513939209 -0.023 0.547 0.787841379471053 0.00121195043976308 -0.2827876528617 6.17265859452346 Q96TA1 FAM129B Q96TA1.S574.p_FAM129B Q96TA1_S574s _1_1_574_574 Q96TA1 Q96TA1|Q96TA1-2 Niban-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26724.26724.5 32.63 28.97 1.111 12 1 1 0 1119.5162 5513.579 S574s TMT10 567 (R) DSMVMHNsDPNLHLLAEGAPIDWGEEYSNSGGGGSPSPSTPESATLSEK (R) DS(0.0)MVMHNS(0.99)DPNLHLLAEGAPIDWGEEY(0.0)S(0.0)NS(0.0)GGGGS(0.0)PS(0.0)PS(0.0)T(0.0)PES(0.0)AT(0.0)LS(0.0)EK K:TMT10,s:Phosphorylated S FAM129B 84649.8 21 2 1146.1 172.91 HUMAN 1 -1.0356 29.1652 DSNELSDSAGEEDSA-p Q9Y6X9;S779-p DSNELSDSAGEEDSA 0.250689107676978 0.587431286426943 0.182666666666667 0.0813333333333334 11.4649766267783 3.12336703407512 0.182666666666667 0.0813333333333334 0.0713678046044012 0.487150661476953 2.23777957428164 0.745252963231345 Q9Y6X9 MORC2 Q9Y6X9.S779.p_MORC2 Q9Y6X9_S777sS779s_2_2_777_779 Q9Y6X9 Q9Y6X9|Q9Y6X9-2 MORC family CW-type zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14946.14946.2 16.53 16.53 5.235 4 2 2 0 1250.5259 2340.1091 S777s S779s TMT10 772 (K) DSNELsDsAGEEDSADLK (R) DS(0.0)NELS(0.99)DS(0.99)AGEEDS(0.0)ADLK K:TMT10,s:Phosphorylated S MORC2 118619.8 22 14 309.1 372.4 HUMAN 1 11.465 3.1234 DSNNQSKSPLEKFMV-p Q96JN0-3;S128-p DSNNQSKSPLEKFMV 0.17776892686696 0.00140014198002876 -0.214333333333333 -0.937 14.8655871405505 46.1979461547571 -0.214333333333333 -0.937 0.032616795142815 2.39996763220501e-05 -2.8532797387816 -13.3040612767259 Q96JN0 LCOR Q96JN0.3.S128.p_LCOR Q96JN0-3_S128s _1_1_128_128 Q96JN0-3 Q96JN0-3 Isoform 3 of Ligand-dependent corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10081.10081.3 12.27 7.13 1.431 3 1 1 0 762.0766 2204.249 S128s TMT10 119 (K) AVDSNNQSKsPLEK (F) AVDS(0.0)NNQS(0.0)KS(0.99)PLEK K:TMT10,s:Phosphorylated S LCOR 172300.7 4 6 673.1 247.79 HUMAN 1 -14.8656 -46.1979 DSPAFPDSPWRERVL-p Q9NQS7;S275-p DSPAFPDSPWRERVL 0.545514004763735 0.00244980233876088 0.082 -0.946333333333333 4.85802512435889 40.0304569562089 0.082 -0.946333333333334 0.326736375855909 9.93011560178574e-05 1.0779750922533 -10.1450699591934 Q9NQS7 INCENP Q9NQS7.S275.p_INCENP Q9NQS7_S275s _1_1_275_275 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15555.15555.3 13.76 13.76 6.181 2 1 1 0 623.6238 1788.8867 S275s TMT10 268 (R) DSPAFPDsPWRER (V) DS(0.0)PAFPDS(0.99)PWRER s:Phosphorylated S INCENP 105826.3 2 11 138.1 524.38 HUMAN 1 4.858 -40.0305 DSPEKTCSIPIPTII-p Q9UPX8-3;S1028-p DSPEKTCSIPIPTII 0.18142186480323 0.878808270645587 -0.644 -0.027 14.6010328550237 0.788184599334257 -0.644 -0.027 0.0346654398031321 0.834029745747547 -2.80395407533502 -0.219847845818538 Q9UPX8 SHANK2 Q9UPX8.3.S1028.p_SHANK2 Q9UPX8-3_S1028s _1_1_1028_1028 Q9UPX8-3 Q9UPX8-3|A6NHU9 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30812.30812.3 13.27 13.53 2.111 3 1 1 0 627.3625 1800.1069 S1028s TMT10 1026 (K) TCsIPIPTIIVK (E) T(0.0)CS(0.99)IPIPT(0.0)IIVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SHANK2 202341.2 1 14 86.1 628.23 HUMAN 1 -14.601 -0.7882 DSPFGPGSPSKGFFS-p Q9UGJ0-3;S27-p DSPFGPGSPSKGFFS 0.0947038842246105 0.653197318749165 -0.4 -0.0713333333333333 21.7756455333175 2.52647070961677 -0.4 -0.0713333333333333 0.00664408908133711 0.558924219518148 -4.27081286551794 -0.622395646355863 Q9UGJ0 PRKAG2 Q9UGJ0.3.S27.p_PRKAG2 Q9UGJ0-3_S27s _1_1_27_27 Q9UGJ0-3 Q9UGJ0|Q9UGJ0-3 Isoform C of 5'-AMP-activated protein kinase subunit gamma-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14916.14916.3 12.5 12.5 2.362 3 1 1 0 690.7114 1990.1576 S27s TMT10 18 (R) KVDSPFGPGsPSK (G) KVDS(0.0)PFGPGS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S PRKAG2 58609 3 2 2725.1 72.63 HUMAN 1 -21.7756 -2.5265 DSPFYRDSLPGSQRK-p Q92574;S511-p DSPFYRDSLPGSQRK 0.334493735589086 0.19284258201731 -0.153333333333333 -0.150666666666667 8.87732224906621 9.39923476010007 -0.153333333333333 -0.150666666666667 0.129499405622539 0.114835594743255 -1.78712691576007 -1.87678950025509 Q92574 TSC1 Q92574.S511.p_TSC1 Q92574_S511s _1_1_511_511 Q92574 Q92574|Q92574-2 Hamartin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18869.18869.3 10.29 10.29 2.966 4 1 1 0 732.3434 2115.0457 S511s TMT10 501 (R) GGFDSPFYRDsLPGSQR (K) GGFDS(0.0)PFY(0.0)RDS(0.99)LPGS(0.0)QR s:Phosphorylated S TSC1 130734.2 1 6 418.1 320.74 HUMAN 1 -8.8773 -9.3992 DSPGEPCSQECIILQ-p I6L8A6;S555-p DSPGEPCSQECIILQ 0.701517981620146 0.0189613448383213 0.0916666666666667 -0.452 2.89584038966101 23.6857204641526 0.0916666666666667 -0.452 0.513352830591374 0.00427984414077545 0.699175723849498 -4.71294457367935 I6L8A6 NotFound I6L8A6.S555.p_NotFound I6L8A6_S555s _1_1_555_555 I6L8A6 Q99708-2|I6L8A6|Q99708-3 DNA endonuclease RBBP8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24641.24641.3 12.6 12.6 5.13 2 1 1 0 908.4413 2643.3522 S555s TMT10 548 (K) DSPGEPCsQECIILQPLNK (C) DS(0.0)PGEPCS(0.99)QECIILQPLNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RBBP8 103921.2 1 9 258.1 398.22 HUMAN 1 2.8958 -23.6857 DSPGIPPSAGAHQLF-p Q15418;S369-p DSPGIPPSAGAHQLF 0.10987120770175 0.0054867187577044 -0.323 -0.699 20.0724540590328 32.7932486152875 -0.323 -0.699 0.00983455229667284 0.000525623941390314 -3.89451706863318 -7.31605615245878 Q15418 RPS6KA1 Q15418.S369.p_RPS6KA1 Q15418_S363sS369s_2_2_363_369 Q15418 Q15418|E9PGT3|Q15418-4|Q15418-3 Ribosomal protein S6 kinase alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16747.16747.4 12.1 8.61 2.392 3 2 2 0 649.3309 2434.3607 S363s S369s TMT10 359 (R) TPKDsPGIPPsAGAHQLFR (G) T(0.0)PKDS(0.99)PGIPPS(0.99)AGAHQLFR K:TMT10,s:Phosphorylated S RPS6KA1 83120.8 2 8 1026.1 186.86 HUMAN 1 -20.0725 -32.7932 DSPGKQDTEEDEEED-p Q9Y266;T145-p DSPGKQDTEEDEEED 0.0946777628850844 0.0746299405999221 -0.666666666666667 0.230333333333333 21.7794202256374 14.960407709143 -0.666666666666667 0.230333333333333 0.00663831684676129 0.0319123825237921 -4.27166979262904 2.86916270946077 Q9Y266 NUDC Q9Y266.T145.p_NUDC Q9Y266_T145t _1_1_145_145 Q9Y266 Q9Y266 Nuclear migration protein nudC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9840.9840.5 22.1 22.1 5.525 3 1 1 0 718.9463 3510.7377 T145t TMT10 134 (K) NGSLDSPGKQDtEEDEEEDEKDK (G) NGS(0.0)LDS(0.0)PGKQDT(0.99)EEDEEEDEKDK K:TMT10,t:Phosphorylated T NUDC 38299.3 6 4 739.1 234.62 HUMAN 1 -21.7794 14.9604 DSPGLNCSNPFTQLE-p Q15398;S812-p DSPGLNCSNPFTQLE 0.709808893232867 0.769710479460065 0.0693333333333333 0.031 2.7987298443071 1.57123093739351 0.0693333333333333 0.031 0.524960970067885 0.696429094583242 0.679226935586772 0.411561323755898 Q15398 DLGAP5 Q15398.S812.p_DLGAP5 Q15398_S806sS812s_2_2_806_812 Q15398 Q15398|Q15398-1 Disks large-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28710.28710.4 24.35 24.35 7.298 6 2 2 0 820.3676 3118.5135 S806s S812s TMT10 796 (K) SLTTECHLLDsPGLNCsNPFTQLER (R) S(0.0)LT(0.0)T(0.0)ECHLLDS(0.99)PGLNCS(0.99)NPFT(0.0)QLER C:Carbamidomethylation,s:Phosphorylated S DLGAP5 95797.9 2 17 355.1 348.78 HUMAN 1 2.7987 1.5712 DSPHDLDSD______-p Q96CW6;S308-p DSPHDLDSD______ 0.718369071726309 0.251693388477614 0.0686666666666667 0.115666666666667 2.71031584351827 7.89000156706011 0.0686666666666667 0.115666666666667 0.535757692765922 0.162554816920558 0.660933937520138 1.61556819485928 Q96CW6 SLC7A6OS Q96CW6.S308.p_SLC7A6OS Q96CW6_S308s _1_1_308_308 Q96CW6 Q96CW6 Probable RNA polymerase II nuclear localization protein SLC7A6OS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16036.16036.2 17.43 17.43 8.497 3 1 1 0 903.3598 1725.7441 S308s TMT10 297 (K) EFGYDSPHDLDsD (-) EFGY(0.0)DS(0.0)PHDLDS(0.99)D s:Phosphorylated S SLC7A6OS 35255.4 2 5 1926.1 106.59 HUMAN 1 2.7103 7.89 DSPKTPKSPSEKTRY-p O00716;S172-p DSPKTPKSPSEKTRY 0.563303272875107 0.00921472594365585 -0.091 -0.478666666666667 4.59082234455551 28.7642471569842 -0.091 -0.478666666666667 0.347470361064438 0.00132915394401395 -1.0285103430542 -6.05569596409045 O00716 E2F3 O00716.S172.p_E2F3 O00716_S172s _1_1_172_172 O00716 O00716 Transcription factor E2F3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.6623.6623.3 7.97 3.56 1.286 3 1 1 0 547.6461 1560.9564 S172s TMT10 169 (K) TPKsPSEK (T) T(0.0)PKS(0.99)PS(0.0)EK K:TMT10,s:Phosphorylated S E2F3 49560.1 2 3 3334.1 53.58 HUMAN 1 -4.5908 -28.7642 DSPQENVSVTEIIKP-p Q5F1R6-3;S449-p DSPQENVSVTEIIKP 0.362002918323239 0.0820618228869866 -0.134 -0.190333333333333 8.1973896277573 14.3916471089616 -0.134 -0.190333333333333 0.151447126365756 0.0363777043569008 -1.66938614690793 -2.76339934389867 Q5F1R6 DNAJC21 Q5F1R6.3.S449.p_DNAJC21 Q5F1R6-3_S449s _1_1_449_449 Q5F1R6-3 Q5F1R6-2|Q5F1R6-3 Isoform 3 of DnaJ homolog subfamily C member 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21499.21499.5 17.75 12.87 2.289 4 1 1 0 811.6249 3974.1086 S449s TMT10 439 (K) ELEDSPQENVsVTEIIKPCDDPKSEAK (S) ELEDS(0.0)PQENVS(0.99)VT(0.0)EIIKPCDDPKS(0.0)EAK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DNAJC21 64139.2 2 6 1325.1 153.94 HUMAN 1 -8.1974 -14.3916 DSPRAALSSSELLEL-p Q9P2G1;S911-p DSPRAALSSSELLEL 0.0608497647854506 0.0199156990572054 -0.501 -0.369333333333333 26.5953891309043 23.3249987361044 -0.501 -0.369333333333333 0.00219008558607102 0.00465050511506845 -5.45952262441606 -4.62640340184946 Q9P2G1 ANKIB1 Q9P2G1.S911.p_ANKIB1 Q9P2G1_S911s _1_1_911_911 Q9P2G1 Q9P2G1 Ankyrin repeat and IBR domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36348.36348.2 15.13 10.85 1.15 4 1 1 0 1051.0255 2021.0786 S911s TMT10 908 (R) AALsSSELLELGDSLMR (L) AALS(0.99)S(0.0)S(0.0)ELLELGDS(0.0)LMR s:Phosphorylated S ANKIB1 124110.4 4 9 1291.1 157.55 HUMAN 1 -26.5954 -23.325 DSPSECHTPEKVKKP-p O15033;T343-p DSPSECHTPEKVKKP 0.128918631797654 0.668346430610979 0.267333333333333 0.0566666666666667 18.4264096010484 2.39532995760151 0.267333333333333 0.0566666666666667 0.0143667667173855 0.576059050496649 3.54908229633219 0.594599607981441 O15033 AREL1 O15033.T343.p_AREL1 O15033_S337sT343t_2_2_337_343 O15033 O15033|O15033-2|G3V2B5 Apoptosis-resistant E3 ubiquitin protein ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7858.7858.4 17.92 17.92 1.281 5 2 2 0 784.0828 2973.3784 S337s T343t TMT10 325 (R) RPSTAVDEEDEDsPSECHtPEK (V) RPS(0.0)T(0.0)AVDEEDEDS(0.99)PS(0.0)ECHT(0.99)PEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T AREL1 95247.9 2 1 5585.1 17.92 HUMAN 1 18.4264 2.3953 DSQDGSSYRRPLEQQ-p Q14847-2;Y152-p DSQDGSSYRRPLEQQ 0.293243051191471 0.0138631389643701 -0.159 0.402666666666667 10.0529168614038 25.7962365200665 -0.159 0.402666666666667 0.0987889373521201 0.00263254829973868 -1.99090545076596 5.24149186108999 Q14847 LASP1 Q14847.2.Y152.p_LASP1 Q14847-2_Y152y _1_1_152_152 Q14847-2 Q14847-2|Q14847-3 Isoform 2 of LIM and SH3 domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6953.6953.3 10.38 10.38 2.12 5 1 1 0 932.064 2714.2096 Y152y TMT10 131 (R) MGPSGGEGMEPERRDSQDGSSyR (R) MGPS(0.0)GGEGMEPERRDS(0.0)QDGS(0.0)S(0.0)Y(0.99)R y:Phosphorylated Y LASP1 36812.2 2 8 1322.1 154.29 HUMAN 1 -10.0529 25.7962 DSQNPLLSDGDLSTM-p Q00403;S76-p DSQNPLLSDGDLSTM 0.69223739326445 0.868241660413556 0.0706666666666667 -0.0183333333333333 2.99592339324789 0.863945840921477 0.0706666666666667 -0.0183333333333333 0.501657905617838 0.819606541394177 0.719584172329641 -0.239370466712227 Q00403 GTF2B Q00403.S76.p_GTF2B Q00403_S76s _1_1_76_76 Q00403 Q00403 Transcription initiation factor IIB HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.29900.29900.4 18.19 14.55 2.651 4 1 1 0 647.0797 2505.3271 S76s TMT10 67 (R) VGDSQNPLLsDGDLSTMIGK (G) VGDS(0.0)QNPLLS(0.99)DGDLS(0.0)T(0.0)MIGK K:TMT10,s:Phosphorylated S GTF2B 35345.8 4 1 5560.1 18.19 HUMAN 1 2.9959 -0.8639 DSQQAVKSPPLLESP-p Q15036;S415-p DSQQAVKSPPLLESP 0.20352936945728 0.675636934695264 0.225333333333333 -0.0416666666666667 13.3955185530738 2.32666764289987 0.225333333333333 -0.0416666666666667 0.0457560098373316 0.585238967861635 2.58258751117494 -0.579916806940117 Q15036 SNX17 Q15036.S415.p_SNX17 Q15036_S415s _1_1_415_415 Q15036 Q15036|Q15036-2 Sorting nexin-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12185.12185.4 17.51 12.56 3.67 5 1 1 0 705.8723 2740.4994 S415s TMT10 406 (R) RSDSQQAVKsPPLLESPDATR (E) RS(0.0)DS(0.0)QQAVKS(0.99)PPLLES(0.0)PDAT(0.0)R K:TMT10,s:Phosphorylated S SNX17 53185.6 2 4 1175.1 169.84 HUMAN 1 13.3955 -2.3267 DSQSVRHSPIAPSSP-p Q9NQS7;S306-p DSQSVRHSPIAPSSP 0.471715583868753 0.00248947575194659 0.110666666666667 -0.817 6.02213061288811 39.8202981618958 0.110666666666667 -0.817 0.249911901373875 0.000104224587226196 1.28850503016268 -10.0508252962297 Q9NQS7 INCENP Q9NQS7.S306.p_INCENP Q9NQS7_S306s _1_1_306_306 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15420.15420.3 15.11 15.11 4.278 4 1 1 0 761.4159 2202.2647 S306s TMT10 305 (R) HsPIAPSSPSPQVLAQK (Y) HS(0.99)PIAPS(0.0)S(0.0)PS(0.0)PQVLAQK K:TMT10,s:Phosphorylated S INCENP 105826.3 8 13 138.1 524.38 HUMAN 1 6.0221 -39.8203 DSRAQAVSEDAGGNE-p P55884-2;S125-p DSRAQAVSEDAGGNE 0.508385873914341 0.132411490459811 0.209666666666667 0.194333333333333 5.42303919383066 11.5735977250001 0.209666666666667 0.194333333333333 0.286877231185769 0.0696049662939336 1.18104837812072 2.25584407446467 P55884 EIF3B P55884.2.S125.p_EIF3B P55884-2_S125s _1_1_125_125 P55884-2 P55884-2 Isoform 2 of Eukaryotic translation initiation factor 3 subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5400.5400.3 8.83 8.83 99 1 1 1 0 557.2513 1589.7717 S125s TMT10 121 (R) AQAVsEDAGGNEGR (A) AQAVS(1.0)EDAGGNEGR s:Phosphorylated S EIF3B 99769.3 1 3 1156.1 171.77 HUMAN 1 5.423 11.5736 DSRASTVSPGGYMVP-p Q5TGY3;S1064-p DSRASTVSPGGYMVP 0.421053324853859 0.207410285541565 -0.123 -0.149666666666667 6.92765293463083 8.98572035431142 -0.123 -0.149666666666667 0.202877883985119 0.126307158364048 -1.44834320529283 -1.80524264462122 Q5TGY3 AHDC1 Q5TGY3.S1064.p_AHDC1 Q5TGY3_S1064s _1_1_1064_1064 Q5TGY3 Q5TGY3 AT-hook DNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18349.18349.2 16.08 10.61 2.785 4 1 1 0 916.4739 1751.9766 S1064s TMT10 1060 (R) ASTVsPGGYMVPK (G) AS(0.0)T(0.0)VS(0.99)PGGY(0.0)MVPK K:TMT10,s:Phosphorylated S AHDC1 170057.9 5 11 334.1 355.89 HUMAN 1 -6.9277 -8.9857 DSREDEISPPPPNPV-p P10644;S83-p DSREDEISPPPPNPV 0.342480328477406 0.0308357763925434 -0.148666666666667 -0.283 8.64562166745967 20.4222335453531 -0.148666666666667 -0.283 0.136595953248 0.00907353764631899 -1.74701882945716 -3.96634600601956 P10644 PRKAR1A P10644.S83.p_PRKAR1A P10644_S83s _1_1_83_83 P10644 P10644|P10644-2|K7EMZ6 cAMP-dependent protein kinase type I-alpha regulatory subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14542.15192.3 20.56 11.46 5.227 3 1 1 0 839.1003 2435.3182 S83s TMT10 75 (R) TDSREDEIsPPPPNPVVK (G) T(0.0)DS(0.0)REDEIS(0.99)PPPPNPVVK K:TMT10,s:Phosphorylated S PRKAR1A 43209.1 21 1 3134.1 59.83 HUMAN 1 -8.6456 -20.4222 DSRHQQDSDLSAACS-p Q9H9J4;S1219-p DSRHQQDSDLSAACS 0.676419919699668 0.310159388884265 -0.0703333333333333 0.200666666666667 3.18111088262984 6.71719465850425 -0.0703333333333333 0.200666666666667 0.480716370196015 0.212951416946714 -0.756963910849145 1.41103886776792 Q9H9J4 USP42 Q9H9J4.S1219.p_USP42 Q9H9J4_S1219sS1222sS1226s_3_3_1219_1226 Q9H9J4 Q9H9J4|Q9H9J4-2 Ubiquitin carboxyl-terminal hydrolase 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8147.8357.3 14.93 14.93 99 3 3 3 0 832.3148 2255.0308 S1219s S1222s S1226s TMT10 1215 (R) HQQDsDLsAACsDADLHR (H) HQQDS(1.0)DLS(1.0)AACS(1.0)DADLHR C:Carbamidomethylation,s:Phosphorylated S USP42 146872.9 1 14 255.1 399.37 HUMAN 1 -3.1811 6.7172 DSRHYSRSWDNILAP-p C9J069;S448-p DSRHYSRSWDNILAP 0.952209593971326 0.0494315094202505 0.0116666666666666 -0.235 0.422029156866255 17.4686328085517 0.0116666666666666 -0.235 0.907396467690468 0.0179116963886188 0.121874654361791 -3.35287034640396 C9J069 C9orf172 C9J069.S448.p_C9orf172 C9J069_S448s _1_1_448_448 C9J069 C9J069 Uncharacterized protein C9orf172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24235.24235.3 12.01 12.01 99 1 1 1 0 512.2578 1454.7953 S448s TMT10 448 (R) sWDNILAPGPR (R) S(1.0)WDNILAPGPR s:Phosphorylated S C9orf172 107960.6 2 7 430.1 316.49 HUMAN 1 0.422 -17.4686 DSRLVDVSPDRGSPP-p Q9NYZ3;S575-p DSRLVDVSPDRGSPP 0.406340678660012 0.00219431911587215 0.123 -0.754666666666667 7.22255261143968 41.3148738930839 0.123 -0.754666666666667 0.189559143993733 7.38775714653363e-05 1.4999163934652 -10.7388784289663 Q9NYZ3 GTSE1 Q9NYZ3.S575.p_GTSE1 Q9NYZ3_S575s _1_1_575_575 Q9NYZ3 Q9NYZ3 G2 and S phase-expressed protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11417.11417.4 13.21 13.21 5.553 3 1 1 0 448.4805 1710.9336 S575s TMT10 571 (R) LVDVsPDRGSPPSR (V) LVDVS(0.99)PDRGS(0.0)PPS(0.0)R s:Phosphorylated S GTSE1 77156.9 11 13 271.1 394.28 HUMAN 1 7.2226 -41.3149 DSRPESASDSDT___-p Q9Y3B9;S278-p DSRPESASDSDT___ 0.153650540414552 0.0115830568386836 -0.375 0.725 16.347082676625 27.0902876560335 -0.375 0.725 0.0231895185620665 0.00195421001390084 -3.13512067742828 5.58567492777792 Q9Y3B9 RRP15 Q9Y3B9.S278.p_RRP15 Q9Y3B9_S278sS280s_2_2_278_280 Q9Y3B9 Q9Y3B9 RRP15-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4681.4681.3 11.1 11.1 1.419 6 2 2 0 752.6082 2095.8737 S278s S280s TMT10 265 (K) ESDGPDDSRPESAsDsDT (-) ES(0.0)DGPDDS(0.0)RPES(0.0)AS(0.99)DS(0.99)DT(0.0) s:Phosphorylated S RRP15 31654.8 1 5 2423.1 84.16 HUMAN 1 -16.3471 27.0903 DSRSHQNSPTELNKD-p Q08999;S952-p DSRSHQNSPTELNKD 0.685026167269369 0.00318126189359855 -0.0583333333333333 0.622333333333333 3.08192960226665 37.4895265817209 -0.0583333333333334 0.622333333333333 0.491820967462787 0.00017825730726297 -0.737004558713581 9.05753575818862 Q08999 RBL2 Q08999.S952.p_RBL2 Q08999_S952s _1_1_952_952 Q08999 Q08999 Retinoblastoma-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5912.5912.3 13.31 13.31 2.465 3 1 1 0 598.3043 1712.9332 S952s TMT10 948 (R) SHQNsPTELNK (D) S(0.0)HQNS(0.99)PT(0.0)ELNK K:TMT10,s:Phosphorylated S RBL2 129790.7 4 10 408.1 323.79 HUMAN 1 -3.0819 37.4895 DSRSLSYSPVERRRP-p Q9UQ35;S2694-p DSRSLSYSPVERRRP 0.662515509657473 0.188411674756143 0.0896666666666667 0.147 3.34905864988227 9.53197272610712 0.0896666666666666 0.147 0.462481255139933 0.111378849475559 0.790460563702226 1.89977169109765 Q9UQ35 SRRM2 Q9UQ35.S2694.p_SRRM2 Q9UQ35_S2694s _1_1_2694_2694 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12129.12335.2 12.79 8.77 2.333 4 1 1 0 673.8318 1266.6891 S2694s TMT10 2690 (R) SLSYsPVER (R) S(0.0)LS(0.0)Y(0.0)S(0.99)PVER s:Phosphorylated S SRRM2 300351.7 6 165 2.1 3310.34 HUMAN 1 3.3491 9.532 DSRTTIFSPEGRLYQ-p P25789;S13-p DSRTTIFSPEGRLYQ 0.247048592039774 0.0264750782603506 -0.177333333333333 -0.395666666666667 11.5992378190274 21.4066371443397 -0.177333333333333 -0.395666666666667 0.0691952396978264 0.00723329679883481 -2.26144551831035 -4.18327459914541 P25789 PSMA4 P25789.S13.p_PSMA4 P25789_S13s _1_1_13_13 P25789 P25789|H0YLC2|H0YLS6 Proteasome subunit alpha type-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15399.15399.2 13.41 13.41 4.287 3 1 1 0 658.8276 1236.6786 S13s TMT10 9 (R) TTIFsPEGR (L) T(0.0)T(0.0)IFS(0.99)PEGR s:Phosphorylated S PSMA4 29768.5 2 2 4107.1 37.53 HUMAN 1 -11.5992 -21.4066 DSRTVHRSPLLLGAQ-p Q96DR7;S80-p DSRTVHRSPLLLGAQ 0.80247376174233 0.0136930471859499 -0.0383333333333333 -0.372666666666667 1.8397007571696 25.8928936610251 -0.0383333333333333 -0.372666666666667 0.6546812821538 0.0025746051515303 -0.473002530290595 -5.26665083463567 Q96DR7 ARHGEF26 Q96DR7.S80.p_ARHGEF26 Q96DR7_S80s _1_1_80_80 Q96DR7 Q96DR7|Q96DR7-4|Q96DR7-3 Rho guanine nucleotide exchange factor 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9263.9263.4 10.54 10.54 1.15 2 1 1 0 439.9998 1677.0121 S80s TMT10 76 (R) TVHRsPLLLGAQR (R) T(0.0)VHRS(0.99)PLLLGAQR s:Phosphorylated S ARHGEF26 97914.4 4 1 478.1 300.31 HUMAN 1 -1.8397 -25.8929 DSRVADNSFDAKRGA-p Q14978-3;S644-p DSRVADNSFDAKRGA 0.255894371706111 0.000993050805672115 0.444 -1.27466666666667 11.2508134743832 52.8247088335613 0.444 -1.27466666666667 0.074975376025305 5.21830088407951e-06 2.20010936294201 -17.7279809846856 Q14978 NOLC1 Q14978.3.S644.p_NOLC1 Q14978-3_S644s _1_1_644_644 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15438.15438.4 17.61 14.59 6.3 2 1 1 0 712.3565 2766.431 S644s TMT10 629 (R) VREEEIEVDSRVADNsFDAK (R) VREEEIEVDS(0.0)RVADNS(0.99)FDAK K:TMT10,s:Phosphorylated S NOLC1 73744 13 21 72.1 655.55 HUMAN 1 11.2508 -52.8247 DSRVMVYSALRIPPE-p Q96BI3;S257-p DSRVMVYSALRIPPE 0.528732858253585 0.122069304082743 -0.0973333333333333 -0.163333333333333 5.12108578588617 12.0471871776553 -0.0973333333333334 -0.163333333333333 0.307532785147662 0.0624138944592194 -1.12620211044783 -2.33953432882021 Q96BI3 APH1A Q96BI3.S257.p_APH1A Q96BI3_S257s _1_1_257_257 Q96BI3 Q96BI3|Q96BI3-3 Gamma-secretase subunit APH-1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20366.20366.2 11.97 7.37 8.289 2 1 1 0 624.325 1167.6757 S257s TMT10 253 (R) VMVYsALR (I) VMVY(0.0)S(0.99)ALR s:Phosphorylated S APH1A 29166.7 1 2 5143.1 22.46 HUMAN 1 -5.1211 -12.0472 DSRVSPASPAGSPSA-p Q96C92;S243-p DSRVSPASPAGSPSA 0.146674740935683 0.0102907900139851 -0.242333333333333 -0.479 16.9487078219355 27.9074887788709 -0.242333333333333 -0.479 0.0201896698765614 0.00161901593067243 -3.25253917955337 -5.81151048793655 Q96C92 SDCCAG3 Q96C92.S243.p_SDCCAG3 Q96C92_S243sS247s_2_2_243_247 Q96C92 Q96C92|Q96C92-2|Q96C92-3|Q96C92-4 Serologically defined colon cancer antigen 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18442.18442.3 23.5 23.5 3.008 5 2 2 0 900.7354 2540.2579 S243s S247s TMT10 239 (R) VSPAsPAGsPSADFAVHGESLGDR (H) VS(0.0)PAS(0.99)PAGS(0.99)PS(0.0)ADFAVHGES(0.0)LGDR s:Phosphorylated S SDCCAG3 48302.7 2 7 1849.1 111.15 HUMAN 1 -16.9487 -27.9075 DSRVSVDSNLFVYSK-p Q8TDJ6-3;S1143-p DSRVSVDSNLFVYSK 0.74212588423452 0.392917232204852 0.046 0.114 2.46084988176501 5.39222650553639 0.046 0.114 0.567433552047657 0.288919829199198 0.608603730536423 1.17522110615239 Q8TDJ6 DMXL2 Q8TDJ6.3.S1143.p_DMXL2 Q8TDJ6-3_S1143s _1_1_1143_1143 Q8TDJ6-3 Q8TDJ6-3 Isoform 3 of DmX-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26216.26216.3 9.5 9.5 2.408 4 1 1 0 632.6699 1816.0257 S1143s TMT10 1139 (R) VSVDsNLFVYSK (S) VS(0.0)VDS(0.99)NLFVY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S DMXL2 343259.8 1 3 1366.1 149.7 HUMAN 1 2.4608 5.3922 DSSAELQSLEQQLEE-p Q15075;S139-p DSSAELQSLEQQLEE 0.929912327736474 0.912195411169853 -0.0146666666666667 0.0163333333333334 0.625769050398908 0.559092591830905 -0.0146666666666667 0.0163333333333334 0.865810991629082 0.879206197623447 -0.177179055277638 0.159289639018256 Q15075 EEA1 Q15075.S139.p_EEA1 Q15075_S139s _1_1_139_139 Q15075 Q15075 Early endosome antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34104.34104.4 27.34 27.34 5.958 6 1 1 0 1319.4132 5194.6635 S139s TMT10 116 (K) YQGLQQQEAKPDGLVTDSSAELQsLEQQLEEAQTENFNIK (Q) Y(0.0)QGLQQQEAKPDGLVT(0.0)DS(0.0)S(0.0)AELQS(0.99)LEQQLEEAQT(0.0)ENFNIK K:TMT10,s:Phosphorylated S EEA1 163432.8 4 6 1129.1 174.59 HUMAN 1 -0.6258 0.5591 DSSASSPTEEEQEQG-p P49006;T122-p DSSASSPTEEEQEQG 0.18709748510332 0.0167478142628004 -0.258666666666667 -0.340333333333333 14.3055088951411 24.5176960226442 -0.258666666666667 -0.340333333333333 0.0371064246588147 0.00353370586842556 -2.74918499219548 -4.91666916514276 P49006 MARCKSL1 P49006.T122.p_MARCKSL1 P49006_T122t _1_1_122_122 P49006 P49006 MARCKS-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10329.10867.3 24.6 24.6 1.225 7 1 1 0 1317.8934 3871.6936 T122t TMT10 111 (K) EGGGDSSASSPtEEEQEQGEIGACSDEGTAQEGK (A) EGGGDS(0.0)S(0.0)AS(0.0)S(0.0)PT(0.99)EEEQEQGEIGACS(0.0)DEGT(0.0)AQEGK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MARCKSL1 19585.5 3 9 402.1 327.42 HUMAN 1 -14.3055 -24.5177 DSSCQVLTDSESAED-p Q4W5G0;T445-p DSSCQVLTDSESAED 0.729757185802638 0.0188127904433449 -0.0776666666666667 0.361666666666667 2.59501279892578 23.7434094998519 -0.0776666666666667 0.361666666666667 0.550172299116686 0.00422336921575344 -0.63688212634366 4.72688366561136 Q4W5G0 TIGD2 Q4W5G0.T445.p_TIGD2 Q4W5G0_T445t _1_1_445_445 Q4W5G0 Q4W5G0 Tigger transposable element-derived protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12109.12109.3 22.14 22.14 1.136 8 1 1 0 904.7363 2632.2296 T445t TMT10 436 (R) SSDSSCQVLtDSESAEDQTK (A) S(0.0)S(0.0)DS(0.0)S(0.0)CQVLT(0.99)DS(0.0)ES(0.0)AEDQT(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T TIGD2 60135.6 1 1 5177.1 22.14 HUMAN 1 -2.595 23.7434 DSSEMDHSENEDYTM-p Q9NTI5;S1182-p DSSEMDHSENEDYTM 0.207512802439712 0.538121521699657 0.209333333333333 0.08 13.178090273442 3.62031220127075 0.209333333333333 0.08 0.0481050834811613 0.434478989658124 2.5432079129176 0.843685330353912 Q9NTI5 PDS5B Q9NTI5.S1182.p_PDS5B Q9NTI5_S1182s _1_1_1182_1182 Q9NTI5 Q9NTI5|Q9NTI5-2 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14453.14453.3 24.57 24.57 2.145 7 1 1 0 1079.1569 3155.4913 S1182s Hydrogen 1174 (R) LDSSEMDHsENEDYTMSSPLPGKK (S) LDS(0.0)S(0.0)EMDHS(0.99)ENEDY(0.0)T(0.0)MS(0.0)S(0.0)PLPGKK K:TMT10-Lys-Only,s:Phosphorylated S PDS5B 165919.5 43 6 100.1 597.99 HUMAN 1 13.1781 3.6203 DSSGQEYSL______-p Q9Y597;S814-p DSSGQEYSL______ 0.269333501255224 0.87484404517895 -0.187333333333333 -0.018 10.8044695680508 0.817663905508958 -0.187333333333333 -0.018 0.0830908196698665 0.828387638268619 -2.1218881834877 -0.227472574802452 Q9Y597 KCTD3 Q9Y597.S814.p_KCTD3 Q9Y597_S814s _1_1_814_814 Q9Y597 Q9Y597 BTB/POZ domain-containing protein KCTD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11641.11641.2 16.25 13.42 4.621 5 1 1 0 869.9171 1658.8638 S814s TMT10 805 (K) KSDSSGQEYsL (-) KS(0.0)DS(0.0)S(0.0)GQEY(0.0)S(0.99)L K:TMT10,s:Phosphorylated S KCTD3 89667 2 16 417.1 320.81 HUMAN 1 -10.8045 -0.8177 DSSGSLGSGEFTGVK-p Q9UBC2-2;S377-p DSSGSLGSGEFTGVK 0.415008029044276 0.862895201571829 0.244 -0.0293333333333333 7.04611200573904 0.903795884259824 0.244 -0.0293333333333333 0.197418932591302 0.812120384512511 1.46908248570367 -0.249545169459132 Q9UBC2 EPS15L1 Q9UBC2.2.S377.p_EPS15L1 Q9UBC2-2_S377s _1_1_377_377 Q9UBC2-2 Q9UBC2-2|M0R165|Q9UBC2-3|Q9UBC2-4|M0R2S2 Isoform 2 of Epidermal growth factor receptor substrate 15-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34976.34976.4 29.45 29.45 2.325 7 1 1 0 1004.2476 3934.0082 S377s TMT10 365 (R) GTPGPDSSGSLGsGEFTGVKELDDISQEIAQLQR (E) GT(0.0)PGPDS(0.0)S(0.0)GS(0.0)LGS(0.99)GEFT(0.0)GVKELDDIS(0.0)QEIAQLQR K:TMT10,s:Phosphorylated S EPS15L1 99718.3 2 8 109.1 576.24 HUMAN 1 7.0461 -0.9038 DSSKDLPSPDSRNCP-p Q9UGU0;S1322-p DSSKDLPSPDSRNCP 0.836372411785846 0.608380081112732 -0.0593333333333334 0.178666666666667 1.49917093707335 2.93148640380197 -0.0593333333333333 0.178666666666667 0.70808094328074 0.509156578766368 -0.39479345225701 0.706363878184532 Q9UGU0 TCF20 Q9UGU0.S1322.p_TCF20 Q9UGU0_S1322s _1_1_1322_1322 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18118.18118.3 16.13 16.13 2.669 5 1 1 0 888.7873 2584.3805 S1322s TMT10 1319 (K) DLPsPDSRNCPAVTLTSPAK (T) DLPS(0.99)PDS(0.0)RNCPAVT(0.0)LT(0.0)S(0.0)PAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TCF20 213250.7 2 19 197.1 457.96 HUMAN 1 -1.4992 2.9315 DSSKGEDSAEETEAK-p Q12906-7;S482-p DSSKGEDSAEETEAK 0.281543097513104 0.0163407056721811 -0.290666666666667 0.651333333333333 10.407513563261 24.6762716397159 -0.290666666666667 0.651333333333334 0.091043436826171 0.00340700551074233 -2.05260706236705 4.95616907097307 Q12906 ILF3 Q12906.7.S482.p_ILF3 Q12906-7_S482s _1_1_482_482 Q12906-7 Q12906-7|Q12906-3|Q12906-6|Q12906-2|Q12906-4|Q12906-5 Isoform 7 of Interleukin enhancer-binding factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6011.6716.3 15.83 15.83 3.446 4 1 1 0 784.0477 2270.1603 S482s TMT10 475 (R) DSSKGEDsAEETEAK (P) DS(0.0)S(0.0)KGEDS(0.99)AEET(0.0)EAK K:TMT10,s:Phosphorylated S ILF3 96205.6 17 10 130.1 537.24 HUMAN 1 -10.4075 24.6763 DSSLSGNSDGGEEFC-p Q8NEF9;S247-p DSSLSGNSDGGEEFC 0.0469412164037233 0.822695280104978 -0.515 -0.0286666666666666 29.4956773120527 1.18772182739645 -0.515 -0.0286666666666666 0.00112313579527883 0.760725224880458 -6.28013774499658 -0.320293120545458 Q8NEF9 SRFBP1 Q8NEF9.S247.p_SRFBP1 Q8NEF9_S247s _1_1_247_247 Q8NEF9 Q8NEF9 Serum response factor-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12169.12169.3 21.27 21.27 3.695 5 1 1 0 1077.156 3149.4784 S247s TMT10 236 (K) NKGSDSSLSGNsDGGEEFCEEEK (E) NKGS(0.0)DS(0.0)S(0.0)LS(0.0)GNS(0.99)DGGEEFCEEEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SRFBP1 48747.1 2 2 1171.1 170.26 HUMAN 1 -29.4957 -1.1877 DSSPTDITPPPSPED-p Q8WVB6-2;T159-p DSSPTDITPPPSPED 0.458740586170401 0.32064971783101 0.101 0.106 6.24306200819542 6.53160198310473 0.101 0.106 0.237516507782368 0.222248992903387 1.32774980875102 1.3783912343087 Q8WVB6 CHTF18 Q8WVB6.2.T159.p_CHTF18 Q8WVB6-2_T159tS163s_2_2_159_163 Q8WVB6-2 Q8WVB6-2|F8WCC1 Isoform 2 of Chromosome transmission fidelity protein 18 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37104.37104.5 13.51 11.6 1.164 8 2 2 0 1020.6512 4939.3305 T159t S163s TMT10 142 (R) SEEMEEPPPPDSSPTDItPPPsPEDLAELWGHGVSEAAADVGLTR (A) S(0.0)EEMEEPPPPDS(0.0)S(0.0)PT(0.0)DIT(0.99)PPPS(0.99)PEDLAELWGHGVS(0.0)EAAADVGLT(0.0)R t:Phosphorylated T,s:Phosphorylated S CHTF18 110890.8 2 7 1974.1 104.64 HUMAN 1 6.2431 6.5316 DSSRDLPSPKKAKTE-p Q8WY36;S183-p DSSRDLPSPKKAKTE 0.102728705875057 0.00388507065497343 -0.385666666666667 -0.656333333333333 20.8820142109156 35.5859471328619 -0.385666666666667 -0.656333333333333 0.00816203737081561 0.000276315524963569 -4.07084927758316 -8.31244193041087 Q8WY36 BBX Q8WY36.S183.p_BBX Q8WY36_S183s _1_1_183_183 Q8WY36 Q8WY36|Q8WY36-2|C9JA69|Q8WY36-3 HMG box transcription factor BBX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11266.11266.3 7.25 7.25 99 1 1 1 0 517.9757 1471.9451 S183s TMT10 180 (R) DLPsPKK (A) DLPS(1.0)PKK K:TMT10,s:Phosphorylated S BBX 106212.3 2 2 621.1 259.66 HUMAN 1 -20.882 -35.5859 DSSSGNVSEGESPPD-p S5FZ81;S327-p DSSSGNVSEGESPPD 0.911438071310171 0.193749393590485 -0.0203333333333333 -0.135 0.78996758535743 9.37188546024397 -0.0203333333333333 -0.135 0.833687407028528 0.11556104327849 -0.220331182600025 -1.87205546263717 S5FZ81 NotFound S5FZ81.S327.p_NotFound S5FZ81_S327s _1_1_327_327 S5FZ81 Q8WUB8-2|Q8WUB8-3|S5FZ81 PHD finger protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9087.9087.3 25.6 25.6 1.643 9 1 1 0 1018.0879 2972.2827 S327s TMT10 317 (K) GTSDSSSGNVsEGESPPDSQEDSFQGR (Q) GT(0.0)S(0.0)DS(0.0)S(0.0)S(0.0)GNVS(0.99)EGES(0.0)PPDS(0.0)QEDS(0.0)FQGR s:Phosphorylated S PHF10 42782.4 4 6 1372.1 149.1 HUMAN 1 -0.79 -9.3719 DSSSVLPSPLSISTK-p Q66K14;S363-p DSSSVLPSPLSISTK 0.80247376174233 0.269665305927878 -0.035 0.122 1.83986463141625 7.49415800241189 -0.035 0.122 0.654656579243152 0.178067310714455 -0.473039442469064 1.54680731290591 Q66K14 TBC1D9B Q66K14.S363.p_TBC1D9B Q66K14_S363s _1_1_363_363 Q66K14 Q66K14|Q66K14-2 TBC1 domain family member 9B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25005.25005.3 10.66 10.66 4.431 7 1 1 0 709.717 2047.1687 S363s TMT10 355 (K) ADSSSVLPsPLSISTK (S) ADS(0.0)S(0.0)S(0.0)VLPS(0.99)PLS(0.0)IS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S TBC1D9B 141663.3 1 2 988.1 191.79 HUMAN 1 -1.8399 7.4942 DSSTRVDSPSHGLVT-p Q9UER7;S688-p DSSTRVDSPSHGLVT 0.709478018853833 0.834743698929883 0.072 -0.0226666666666667 2.80295235488876 1.09943885264481 0.072 -0.0226666666666667 0.524450814838903 0.776347421186276 0.680097421877385 -0.298609109131552 Q9UER7 DAXX Q9UER7.S688.p_DAXX Q9UER7_S688s _1_1_688_688 Q9UER7 Q9UER7|Q9UER7-3 Death domain-associated protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18569.18569.2 18.47 18.47 2.636 6 1 1 0 1080.512 2080.0492 S688s Hydrogen 686 (R) VDsPSHGLVTSSLCIPSPAR (L) VDS(0.99)PS(0.0)HGLVT(0.0)S(0.0)S(0.0)LCIPS(0.0)PAR C:Carbamidomethylation,s:Phosphorylated S DAXX 82112.9 4 10 315.1 368.97 HUMAN 1 2.803 -1.0994 DSSVEVRSDWEVKEE-p O15371;S166-p DSSVEVRSDWEVKEE 0.638521709488803 0.327079353946646 -0.0633333333333333 0.110666666666667 3.63479934162793 6.42659721264614 -0.0633333333333334 0.110666666666667 0.43303207478564 0.22768807153317 -0.846644050435864 1.35987412486587 O15371 EIF3D O15371.S166.p_EIF3D O15371_S166s _1_1_166_166 O15371 O15371|O15371-3 Eukaryotic translation initiation factor 3 subunit D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.26222.26222.5 21.16 17.43 2.21 3 1 1 0 711.1543 3471.7743 S166s TMT10 159 (R) DSSVEVRsDWEVKEEMDFPQLMK (M) DS(0.0)S(0.0)VEVRS(0.99)DWEVKEEMDFPQLMK K:TMT10,s:Phosphorylated S EIF3D 64599.2 1 3 4230.1 35.05 HUMAN 1 -3.6348 6.4266 DSTGTVISDVEEDAG-p Q9Y2D8-3;S285-p DSTGTVISDVEEDAG 0.50556949003824 0.0728218660073545 0.095 -0.230333333333333 5.47000700564177 15.1145196861626 0.095 -0.230333333333333 0.283791445057357 0.0307998095731301 1.18953470328784 -2.89804832466522 Q9Y2D8 SSX2IP Q9Y2D8.3.S285.p_SSX2IP Q9Y2D8-3_S285s _1_1_285_285 Q9Y2D8-3 Q9Y2D8|Q9Y2D8-3|Q9Y2D8-2|S4R403 Isoform 3 of Afadin- and alpha-actinin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24601.24601.3 23.34 23.34 6.863 5 1 1 0 930.0962 2708.306 S285s TMT10 274 (R) ERVDDSTGTVIsDVEEDAGELSR (E) ERVDDS(0.0)T(0.0)GT(0.0)VIS(0.99)DVEEDAGELS(0.0)R s:Phosphorylated S SSX2IP 69071.5 7 3 1943.1 106.03 HUMAN 1 5.47 -15.1145 DSTQSANSSPDEDTE-p Q03164-3;S2394-p DSTQSANSSPDEDTE 0.949715369091024 0.706725828471845 0.00966666666666666 0.0366666666666667 0.443366484382702 2.07119955593852 0.00966666666666667 0.0366666666666667 0.902949270702484 0.62069756894044 0.127764504545304 0.524450891538114 Q03164 KMT2A Q03164.3.S2394.p_KMT2A Q03164-3_S2394sS2395s_2_2_2394_2395 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4336.4336.3 24.26 24.26 5.993 7 2 2 0 1022.4119 2905.2881 S2394s S2395s Hydrogen 2380 (R) NDRDQHTDSTQSANssPDEDTEVK (T) NDRDQHT(0.0)DS(0.0)T(0.0)QS(0.0)ANS(0.99)S(0.99)PDEDT(0.0)EVK K:TMT10-Lys-Only,s:Phosphorylated S KMT2A 436608.3 6 51 26.1 936.8 HUMAN 1 0.4434 2.0712 DSTRARLSPDGVAPT-p B2RXF5;S328-p DSTRARLSPDGVAPT 0.959278687747033 0.588710690003987 0.00933333333333332 0.0686666666666667 0.350032386946021 3.11043286214929 0.00933333333333331 0.0686666666666667 0.922564547224014 0.488603657694849 0.101822158721942 0.742648117606305 B2RXF5 ZBTB42 B2RXF5.S328.p_ZBTB42 B2RXF5_S328s _1_1_328_328 B2RXF5 B2RXF5 Zinc finger and BTB domain-containing protein 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16886.16886.3 21.33 21.33 6.448 2 1 1 0 779.7338 2257.2197 S328s TMT10 325 (R) ARLsPDGVAPTCPLCGK (T) ARLS(0.99)PDGVAPT(0.0)CPLCGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZBTB42 47631.5 5 2 3631.1 46.54 HUMAN 1 0.35 3.1104 DSTSRRDSLDKSGLF-p Q96C24;S217-p DSTSRRDSLDKSGLF 0.715536473356716 0.00599697905125109 0.0613333333333333 0.580333333333333 2.74252368707462 32.0905252531203 0.0613333333333333 0.580333333333333 0.531799140755006 0.000617941659282438 0.66761253388769 7.0819950616405 Q96C24 SYTL4 Q96C24.S217.p_SYTL4 Q96C24_S217s _1_1_217_217 Q96C24 Q96C24|Q96C24-2 Synaptotagmin-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19173.19173.3 15.71 10.44 1.2 10 1 1 0 1186.5569 3477.6869 S217s TMT10 193 (K) SALEAESESLDSFTADSDSTSRRDsLDK (S) S(0.0)ALEAES(0.0)ES(0.0)LDS(0.0)FT(0.0)ADS(0.0)DS(0.0)T(0.0)S(0.0)RRDS(0.99)LDK K:TMT10,s:Phosphorylated S SYTL4 76649.8 2 3 1078.1 180.34 HUMAN 1 2.7425 32.0905 DSVKTPESEGNPLLE-p Q8WYK2-2;S162-p DSVKTPESEGNPLLE 0.38707572980181 0.0598007741184257 -0.156 -0.377333333333333 7.62515693410071 16.298397003495 -0.156 -0.377333333333333 0.17277635459321 0.0234509423828676 -1.57005939264595 -3.1234391200777 Q8WYK2 JDP2 Q8WYK2.2.S162.p_JDP2 Q8WYK2-2_T159tS162s_2_2_159_162 Q8WYK2-2 Q8WYK2-2 Isoform 2 of Jun dimerization protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25277.25277.5 16.66 16.66 1.193 4 2 2 0 684.565 3258.8603 T159t S162s TMT10 154 (R) TDSVKtPEsEGNPLLEQLEKK (-) T(0.0)DS(0.0)VKT(0.99)PES(0.99)EGNPLLEQLEKK K:TMT10,t:Phosphorylated T,s:Phosphorylated S JDP2 19896.7 3 2 4236.1 34.99 HUMAN 1 -7.6252 -16.2984 DSVLENKSLQENEEE-p P49321-3;S505-p DSVLENKSLQENEEE 0.105961047054891 0.00345604016854663 -0.405666666666667 0.781666666666667 20.5264467128884 36.7899554092442 -0.405666666666667 0.781666666666667 0.00885840085268336 0.000209413395705352 -3.99285349676825 8.77711327511963 P49321 NASP P49321.3.S505.p_NASP P49321-3_S505s _1_1_505_505 P49321-3 P49321-3|P49321-4|P49321-2|Q5T624 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.37517.37517.3 30.24 29.64 99 1 1 1 0 1109.8776 3247.6444 S505s TMT10 505 (K) sLQENEEEEIGNLELAWDMLDLAK (I) S(1.0)LQENEEEEIGNLELAWDMLDLAK K:TMT10,s:Phosphorylated S NASP 86552 11 19 87.1 626.46 HUMAN 1 -20.5264 36.79 DSWLPAKSPPTNKIG-p Q9UPQ9;S1461-p DSWLPAKSPPTNKIG 0.603818036069891 0.65986419853436 -0.0796666666666667 -0.043 4.04459694765133 2.4703459612423 -0.0796666666666667 -0.043 0.394039995315472 0.566194183918658 -0.925644801552087 -0.610538564460205 Q9UPQ9 TNRC6B Q9UPQ9.S1461.p_TNRC6B Q9UPQ9_S1461s_1_1_1461_1461 Q9UPQ9 Q9UPQ9|Q9UPQ9-1|Q9UPQ9-2 Trinucleotide repeat-containing gene 6B protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24129.24129.5 8.82 4.79 1.406 7 1 1 0 904.4625 4437.3082 N1435n S1461s TMT10 1430 (R) GGSPYnQFDIIPGDTLGGHTGPAGDSWLPAKsPPTNK (I) GGS(0.0)PY(0.0)N(0.99)QFDIIPGDT(0.0)LGGHT(0.0)GPAGDS(0.0)WLPAKS(0.99)PPT(0.0)N(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S TNRC6B 194854.6 1 11 865.1 210.19 HUMAN 1 -4.0446 -2.4703 DSYSAGQSVEILDGV-p P42345;S2454-p DSYSAGQSVEILDGV 0.131539706649705 0.0221420189415373 0.336666666666667 0.346333333333333 18.1894854819271 22.606912063315 0.336666666666667 0.346333333333333 0.0151723010634679 0.00548666941460773 3.50071547182823 4.45722981652357 P42345 MTOR P42345.S2454.p_MTOR P42345_S2454s _1_1_2454_2454 P42345 P42345|B1AKP8 Serine/threonine-protein kinase mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23492.23492.3 17.24 18.38 4.897 5 1 1 0 1014.1633 2960.5253 S2454s TMT10 2446 (R) TDSYSAGQsVEILDGVELGEPAHK (K) T(0.0)DS(0.0)Y(0.0)S(0.0)AGQS(0.99)VEILDGVELGEPAHK K:TMT10,s:Phosphorylated S MTOR 290940.5 1 5 571.1 269.24 HUMAN 1 18.1895 22.6069 DSYSSRDYPSSRDTR-p P38159;Y225-p DSYSSRDYPSSRDTR 0.430531467182277 0.109014216639308 -0.156666666666667 -0.272333333333333 6.73947141493398 12.7162826051886 -0.156666666666667 -0.272333333333333 0.211861897923502 0.0535022121947382 -1.41532748382051 -2.45875208029739 P38159 RBMX P38159.Y225.p_RBMX P38159_Y225y _1_1_225_225 P38159 P38159|Q96E39|P38159-2|H3BT71|H3BUY5 RNA-binding motif protein, X chromosome GG20160819_MSz_CCLE_T4D7_pY_Injection_01.4940.4940.3 17.54 17.54 2.368 7 1 1 0 576.9189 1648.7764 Y225y TMT10 218 (K) DSYSSRDyPSSR (D) DS(0.0)Y(0.0)S(0.0)S(0.0)RDY(0.99)PS(0.0)S(0.0)R y:Phosphorylated Y RBMX 42331.1 4 4 6.1 110.91 HUMAN 1 -6.7395 -12.7163 DSYSSSRSDLYSSCD-p Q96E39;S332-p DSYSSSRSDLYSSCD 0.299702423811655 0.0317638083270452 0.215 0.285 9.83871404133493 20.2310229989485 0.215 0.285 0.103783567650511 0.00948195085646075 1.95370272763172 3.92497969613846 Q96E39 RBMXL1 Q96E39.S332.p_RBMXL1 Q96E39_S332s _1_1_332_332 Q96E39 Q96E39 RNA binding motif protein, X-linked-like-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7449.7449.3 17.69 12.73 2.183 9 1 1 0 731.9713 2113.9294 S332s TMT10 325 (R) DSYSSSRsDLYSSCDR (V) DS(0.0)Y(0.0)S(0.0)S(0.0)S(0.0)RS(0.99)DLY(0.0)S(0.0)S(0.0)CDR C:Carbamidomethylation,s:Phosphorylated S RBMXL1 42197.9 1 42 102.2 595.29 HUMAN 1 9.8387 20.231 DSYSSSRSDLYSSGR-p P38159;S332-p DSYSSSRSDLYSSGR 0.647342264442296 0.0816154540949912 0.0633333333333333 0.311333333333333 3.53806976540652 14.426461582389 0.0633333333333333 0.311333333333333 0.442785125786554 0.0360872544458618 0.82773290033707 2.76983631629263 P38159 RBMX P38159.S332.p_RBMX P38159_S332s _1_1_332_332 P38159 P38159|P38159-2|H3BUY5 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5764.5764.3 9.39 3.25 1.18 9 1 1 0 749.6681 2167.0213 S332s TMT10 325 (R) DSYSSSRsDLYSSGRDR (V) DS(0.0)Y(0.0)S(0.0)S(0.0)S(0.0)RS(0.99)DLY(0.0)S(0.0)S(0.0)GRDR s:Phosphorylated S RBMX 42331.1 1 29 102.1 595.29 HUMAN 1 3.5381 14.4265 DSYVRPCTLVRICDE-p Q7RTV0;T41-p DSYVRPCTLVRICDE 0.414715625274144 0.295835450126919 0.117333333333333 0.108 7.05366946953532 6.9837801621763 0.117333333333333 0.108 0.197075688756698 0.200272806492762 1.47040453795184 1.45777190342367 Q7RTV0 PHF5A Q7RTV0.T41.p_PHF5A Q7RTV0_T41t _1_1_41_41 Q7RTV0 Q7RTV0 PHD finger-like domain-containing protein 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17477.17477.3 11.14 7.17 2.272 3 1 1 0 736.3514 2127.0711 T41t TMT10 30 (K) CVICDSYVRPCtLVR (I) CVICDS(0.0)Y(0.0)VRPCT(0.99)LVR C:Carbamidomethylation,t:Phosphorylated T PHF5A 13146.9 1 1 3676.1 45.52 HUMAN 1 7.0537 6.9838 DTADPAKSPKPSNGA-p P00519-2;S678-p DTADPAKSPKPSNGA 0.421883877305009 0.113931674968845 0.107 -0.2 6.90453958265155 12.4407836809199 0.107 -0.2 0.20396048768834 0.0570061395875992 1.44429280830163 -2.4095157323484 P00519 ABL1 P00519.2.S678.p_ABL1 P00519-2_S678s _1_1_678_678 P00519-2 P00519|P00519-2 Isoform IB of Tyrosine-protein kinase ABL1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20958.20958.5 17.65 17.65 1.615 5 1 1 0 995.3112 4892.5746 S678s TMT10 651 (R) GAGEEEGRDISNGALAFTPLDTADPAKsPKPSNGAGVPNGALR (E) GAGEEEGRDIS(0.0)NGALAFT(0.0)PLDT(0.0)ADPAKS(0.99)PKPS(0.0)NGAGVPNGALR K:TMT10,s:Phosphorylated S ABL1 125637.1 6 7 347.1 352.28 HUMAN 1 6.9045 -12.4408 DTAEKAKSHLEVPLE-p Q96CT7;S122-p DTAEKAKSHLEVPLE 0.984567026012313 0.738826380361006 0.00366666666666666 0.065 0.136400360606488 1.81333288579351 0.00366666666666667 0.0650000000000001 0.969080743728997 0.658668222568292 0.0405868032871123 0.467002205174152 Q96CT7 CCDC124 Q96CT7.S122.p_CCDC124 Q96CT7_S122s _1_1_122_122 Q96CT7 Q96CT7 Coiled-coil domain-containing protein 124 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11856.11856.4 11.47 11.47 99 1 1 1 0 608.0824 2349.3403 S122s TMT10 120 (K) AKsHLEVPLEENVNRR (V) AKS(1.0)HLEVPLEENVNRR K:TMT10,s:Phosphorylated S CCDC124 25834.8 1 1 4674.1 28.12 HUMAN 1 0.1364 1.8133 DTAEKNASSPEKAKG-p Q9ULW0;S185-p DTAEKNASSPEKAKG 0.0658438295661245 0.00153816434231582 0.928666666666667 -1.75366666666667 25.516896257564 45.3003203269333 0.928666666666667 -1.75366666666667 0.00280743929446968 2.95099155939737e-05 5.17589326980449 -12.7930569593951 Q9ULW0 TPX2 Q9ULW0.S185.p_TPX2 Q9ULW0_S185sS186s_2_2_185_186 Q9ULW0 Q9ULW0-2 Targeting protein for Xklp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6082.6082.5 14.5 14.5 4.778 4 2 2 0 761.3935 3642.9948 S185s S186s TMT10 167 (K) KKPEEEGSAHQDTAEKNAssPEK (A) KKPEEEGS(0.0)AHQDT(0.0)AEKNAS(0.99)S(0.99)PEK K:TMT10,s:Phosphorylated S TPX2 86279.1 1 14 599.1 263.33 HUMAN 1 25.5169 -45.3003 DTAEPADSGTERLLP-p O15054-1;S947-p DTAEPADSGTERLLP 0.0519525792237636 0.980462074949308 -0.482 -0.00333333333333334 28.0544423583157 0.122355331223591 -0.482 -0.00333333333333334 0.00156514927421791 0.972219811886352 -5.86133981005567 -0.0364606241019659 O15054 KDM6B O15054.1.S947.p_KDM6B O15054-1_S947s _1_1_947_947 O15054-1 O15054-1 Isoform 1 of Lysine-specific demethylase 6B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10803.10803.3 13.3 13.3 1.136 5 1 1 0 804.3531 2331.0786 S947s TMT10 931 (R) SATDPADPVDTAEPADsGTER (L) S(0.0)AT(0.0)DPADPVDT(0.0)AEPADS(0.99)GT(0.0)ER s:Phosphorylated S KDM6B 182353.2 1 2 5210.1 21.76 HUMAN 1 -28.0544 -0.1224 DTANQEPTPKSPCGL-p E9PGC8;T1407-p DTANQEPTPKSPCGL 0.2734486714236 0.275390859448174 -0.494 -0.529333333333333 10.6608220617648 7.37998260974737 -0.494 -0.529333333333333 0.0858850937044496 0.182810753633436 -2.09678892956079 -1.52693173119688 E9PGC8 NotFound E9PGC8.T1407.p_NotFound E9PGC8_T1407t _1_1_1407_1407 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26421.26421.5 15.17 15.17 1.112 11 1 1 0 970.2783 4767.4075 T1407t Hydrogen 1382 (R) SLSPEDAESLSVLSVPSPDTANQEPtPKSPCGLTEQYLHK (D) S(0.0)LS(0.0)PEDAES(0.0)LS(0.0)VLS(0.0)VPS(0.0)PDT(0.0)ANQEPT(0.99)PKS(0.0)PCGLT(0.0)EQY(0.0)LHK K:TMT10-Lys-Only,C:Carbamidomethylation,t:Phosphorylated T MAP1A 332906.7 1 21 20.1 1016.98 HUMAN 1 -10.6608 -7.38 DTDDRSQTILPLVKS-p Q6NUP7;T290-p DTDDRSQTILPLVKS 0.127767258653097 0.0970339410401999 -0.366666666666667 -0.281666666666667 18.5128838026274 13.3942881847098 -0.366666666666667 -0.281666666666667 0.0140835331296627 0.0457689744787392 -3.5668170582235 -2.58089653250199 Q6NUP7 PPP4R4 Q6NUP7.T290.p_PPP4R4 Q6NUP7_S288sT290t_2_2_288_290 Q6NUP7 Q6NUP7 Serine/threonine-protein phosphatase 4 regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.35367.35367.4 7.93 2.43 1.127 6 2 2 0 1071.0261 4120.2015 N277n S288s T290t Hydrogen 262 (R) DEGSSVRLAAFETLVnLLDIFDTDDRsQtILPLVK (S) DEGS(0.0)S(0.0)VRLAAFET(0.0)LVN(1.0)LLDIFDT(0.0)DDRS(0.99)QT(0.99)ILPLVK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S,t:Phosphorylated T PPP4R4 100534.2 1 5 3685.1 45.41 HUMAN 1 -18.5129 -13.3943 DTDFVPPSPEEIISA-p P54132;S304-p DTDFVPPSPEEIISA 0.367877784196778 0.0867105486491748 -0.164 -0.221666666666667 8.05550476728765 14.0579543326343 -0.164 -0.221666666666667 0.156476644060397 0.0392829927418917 -1.64478786638246 -2.70193624562764 P54132 BLM P54132.S304.p_BLM P54132_S304s _1_1_304_304 P54132 P54132|H0YNU5 Bloom syndrome protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.35045.35045.4 20.98 20.98 3.907 9 1 1 0 1022.47 4006.868 S304s TMT10 286 (K) VPCIEFDDDDYDTDFVPPsPEEIISASSSSSK (C) VPCIEFDDDDY(0.0)DT(0.0)DFVPPS(0.99)PEEIIS(0.0)AS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BLM 160709.2 2 8 1140.2 173.27 HUMAN 1 -8.0555 -14.058 DTDLGALSNDGSDDG-p O15014;S605-p DTDLGALSNDGSDDG 0.995010386084919 0.828962288733982 0.000999999999999996 0.0273333333333333 0.0447991296652549 1.13779225535687 0.000999999999999995 0.0273333333333334 0.98973764025858 0.769521528673695 0.0134672014736029 0.308062829757054 O15014 ZNF609 O15014.S605.p_ZNF609 O15014_S605sS609s_2_2_605_609 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25562.25562.4 21.03 21.03 3.221 8 2 2 0 1223.8105 4732.2623 S605s S609s TMT10 592 (K) KLSGEGDTDLGALsNDGsDDGPSVMDETSNDAFDSLERK (C) KLS(0.0)GEGDT(0.0)DLGALS(0.99)NDGS(0.99)DDGPS(0.0)VMDET(0.0)S(0.0)NDAFDS(0.0)LERK K:TMT10,s:Phosphorylated S ZNF609 152443.5 7 35 63.1 699.07 HUMAN 1 0.0448 1.1378 DTDLLDRSASKTELK-p Q96QT6;S142-p DTDLLDRSASKTELK 0.49340271649839 0.650239107128444 -0.249333333333333 -0.0443333333333333 5.64913989142123 2.5514675616872 -0.249333333333333 -0.0443333333333333 0.272324058517234 0.55571643863622 -1.22179885560546 -0.62765825492798 Q96QT6 PHF12 Q96QT6.S142.p_PHF12 Q96QT6_S142s _1_1_142_142 Q96QT6 Q96QT6|Q96QT6-3|Q96QT6-5|C9J9G2|Q96QT6-2 PHD finger protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14989.14989.4 17.24 17.24 2.211 9 1 1 0 755.6506 2939.614 S142s TMT10 129 (R) TTSPSSDTDLLDRsASKTELK (A) T(0.0)T(0.0)S(0.0)PS(0.0)S(0.0)DT(0.0)DLLDRS(0.99)AS(0.0)KT(0.0)ELK K:TMT10,s:Phosphorylated S PHF12 111750.5 3 2 626.1 258.17 HUMAN 1 -5.6491 -2.5515 DTDMKRLSMEIEKEK-p P35240-2;S518-p DTDMKRLSMEIEKEK 0.169820359254763 0.234882244048764 -0.275333333333333 -0.173333333333333 15.3611381774683 8.28527917911909 -0.275333333333333 -0.173333333333333 0.0290995439169071 0.148413047209305 -2.94646136915253 -1.68406219535875 P35240 NF2 P35240.2.S518.p_NF2 P35240-2_S518s _1_1_518_518 P35240-2 P35240-2|P35240-3|P35240-8|P35240-5|P35240-6|P35240-4|P30622|P30622-1|P30622-2|J3KP58|F5H0N7 Isoform 2 of Merlin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15042.15042.2 9.36 9.36 99 1 1 1 0 772.4192 1463.8656 S518s TMT10 516 (K) RLsMEIEK (E) RLS(1.0)MEIEK K:TMT10,s:Phosphorylated S NF2 72740.6 3 3 4821.1 26.27 HUMAN 1 -15.3611 -8.2853 DTDPLTRSIHEALRR-p Q8N9B5;S959-p DTDPLTRSIHEALRR 0.82783001131982 0.278610598132371 0.0626666666666667 0.2 1.57821422665041 7.31167693925393 0.0626666666666667 0.2 0.695310163061285 0.185708724040323 0.413227053412429 1.51503042268965 Q8N9B5 JMY Q8N9B5.S959.p_JMY Q8N9B5_S959s _1_1_959_959 Q8N9B5 Q8N9B5 Junction-mediating and -regulatory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5400.5400.3 11.27 11.27 99 1 1 1 0 430.8998 1210.7218 S959s TMT10 959 (R) sIHEALRR (I) S(1.0)IHEALRR s:Phosphorylated S JMY 112127.7 1 12 1120.1 175.11 HUMAN 1 1.5782 7.3117 DTDSSRASLPELPRM-p Q8TF74;S144-p DTDSSRASLPELPRM 0.481039545102286 0.570154463144634 0.162 -0.0606666666666667 5.84866272750073 3.28846350426071 0.162 -0.0606666666666667 0.26009603233435 0.468979273546701 1.25755680824061 -0.778302078847478 Q8TF74 WIPF2 Q8TF74.S144.p_WIPF2 Q8TF74_S144s _1_1_144_144 Q8TF74 Q8TF74 WAS/WASL-interacting protein family member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12889.12889.5 12.68 12.68 1.32 6 1 1 0 697.1542 3401.7723 S144s TMT10 120 (R) AAAPRPPVSAASGRPQDDTDSSRAsLPELPR (M) AAAPRPPVS(0.0)AAS(0.0)GRPQDDT(0.0)DS(0.0)S(0.0)RAS(0.99)LPELPR s:Phosphorylated S WIPF2 46344.7 1 2 952.1 196.18 HUMAN 1 5.8487 -3.2885 DTEDECWSDTEAVPR-p Q9H6H4;S202-p DTEDECWSDTEAVPR 0.885780122717551 0.0201264196371064 -0.0213333333333333 0.461666666666667 1.03944072832883 23.2375077112739 -0.0213333333333333 0.461666666666667 0.787147149665281 0.00474514216939463 -0.283742667264468 4.60557235870038 Q9H6H4 REEP4 Q9H6H4.S202.p_REEP4 Q9H6H4_S202s _1_1_202_202 Q9H6H4 Q9H6H4 Receptor expression-enhancing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17041.17041.3 22.78 21.12 2.141 4 1 1 0 916.383 2667.1678 S202s TMT10 188 (R) AGGLQDSDTEDECWsDTEAVPR (A) AGGLQDS(0.0)DT(0.0)EDECWS(0.99)DT(0.0)EAVPR C:Carbamidomethylation,s:Phosphorylated S REEP4 29565.8 1 4 1742.1 118.21 HUMAN 1 -1.0394 23.2375 DTEGRPPSPPPTSTP-p Q00613;S363-p DTEGRPPSPPPTSTP 0.250538100050819 0.00638262730764488 0.169666666666667 0.818666666666667 11.4717761678136 31.5766248690751 0.169666666666667 0.818666666666667 0.0712561548704789 0.000695564667494999 2.23897716576426 6.91480601789416 Q00613 HSF1 Q00613.S363.p_HSF1 Q00613_S363s _1_1_363_363 Q00613 Q00613|E9PMQ6|Q00613-2 Heat shock factor protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6842.7048.3 17.26 11.73 3.441 6 1 1 0 876.1026 2546.3251 S363s TMT10 353 (R) GHTDTEGRPPsPPPTSTPEK (C) GHT(0.0)DT(0.0)EGRPPS(0.99)PPPT(0.0)S(0.0)T(0.0)PEK K:TMT10,s:Phosphorylated S HSF1 57544.7 5 6 1960.1 105.12 HUMAN 1 11.4718 31.5766 DTEHEESSNDDLVDF-p Q86V15;S721-p DTEHEESSNDDLVDF 0.559422364195579 0.703953959582358 -0.0793333333333333 0.0373333333333334 4.65555529385081 2.09547249309386 -0.0793333333333333 0.0373333333333334 0.342329614175274 0.617238135469799 -1.04054098281712 0.529780209175204 Q86V15 CASZ1 Q86V15.S721.p_CASZ1 Q86V15_S720sS721s_2_2_720_721 Q86V15 Q86V15|Q86V15-2 Zinc finger protein castor homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.32704.32926.4 16.28 16.28 3.661 9 2 2 0 1131.0541 4361.2603 S720s S721s TMT10 699 (R) SSGALGLPPSLLGAKDTEHEEssNDDLVDFSALSSK (N) S(0.0)S(0.0)GALGLPPS(0.0)LLGAKDT(0.0)EHEES(0.99)S(0.99)NDDLVDFS(0.0)ALS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CASZ1 193374.5 7 12 530.1 281.17 HUMAN 1 -4.6556 2.0955 DTEKMDRTPEKDKIS-p Q7Z6E9;T1194-p DTEKMDRTPEKDKIS 0.732153232750531 0.627999732199763 -0.0723333333333333 0.0586666666666667 2.56713511492027 2.74775086749493 -0.0723333333333334 0.0586666666666667 0.553715254878533 0.531159450878833 -0.631032599620964 0.668605419840396 Q7Z6E9 RBBP6 Q7Z6E9.T1194.p_RBBP6 Q7Z6E9_T1194t _1_1_1194_1194 Q7Z6E9 Q7Z6E9|Q7Z6E9-2 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13884.13884.4 12.48 10.87 8.789 3 1 1 0 721.6606 2803.6522 T1194t TMT10 1191 (K) MDRtPEKDKISLSAPAK (K) MDRT(0.99)PEKDKIS(0.0)LS(0.0)APAK K:TMT10,t:Phosphorylated T RBBP6 202473.6 22 17 27.1 935.6 HUMAN 1 -2.5671 2.7478 DTEKVPLSPLPGPKQ-p Q8NHU6;S319-p DTEKVPLSPLPGPKQ 0.268770688456976 0.0194385293667417 0.181 -0.364333333333333 10.8211760735607 23.5036930842678 0.181 -0.364333333333333 0.0827717986547138 0.00446303909926813 2.1248095027449 -4.6691415810893 Q8NHU6 TDRD7 Q8NHU6.S319.p_TDRD7 Q8NHU6_S319s _1_1_319_319 Q8NHU6 Q8NHU6|Q8NHU6-2 Tudor domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22355.22355.3 15.67 15.67 7.865 3 1 1 0 858.819 2494.4736 S319s TMT10 309 (R) SELDTEKVPLsPLPGPK (Q) S(0.0)ELDT(0.0)EKVPLS(0.99)PLPGPK K:TMT10,s:Phosphorylated S TDRD7 125123.8 1 1 4211.1 35.37 HUMAN 1 10.8212 -23.5037 DTEQLRRSMQDATQD-p Q9P2M7;S526-p DTEQLRRSMQDATQD 0.297311465557868 0.852464581890275 -0.147 0.028 9.92171701390025 0.975295386015281 -0.147 0.028 0.101818876035255 0.79885960526885 -1.96811317564121 0.267643728945312 Q9P2M7 CGN Q9P2M7.S526.p_CGN Q9P2M7_S526s _1_1_526_526 Q9P2M7 Q9P2M7|Q9P2M7-2 Cingulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11151.11151.3 16.6 16.6 2.422 2 1 1 0 703.9868 2029.981 S526s TMT10 526 (R) sMQDATQDHAVLEAER (Q) S(0.99)MQDAT(0.0)QDHAVLEAER s:Phosphorylated S CGN 136611.7 1 15 239.1 416.31 HUMAN 1 -9.9217 0.9753 DTEVTALSEDEYFSA-p Q12888-2;S1553-p DTEVTALSEDEYFSA 0.280329017949824 0.00377183674542825 -0.538 0.916333333333333 10.4376643005526 35.9442148642983 -0.538 0.916333333333334 0.0904135600379767 0.000254435973153197 -2.05786100811187 8.44839243340851 Q12888 TP53BP1 Q12888.2.S1553.p_TP53BP1 Q12888-2_S1553s _1_1_1553_1553 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36831.36831.4 22.58 20.35 1.112 5 1 1 0 937.7231 3667.9069 S1553s TMT10 1536 (K) DILLCDPIPLDTEVTALsEDEYFSAGVVK (G) DILLCDPIPLDT(0.0)EVT(0.0)ALS(0.99)EDEY(0.0)FS(0.0)AGVVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TP53BP1 216167.2 12 64 3.1 2297.07 HUMAN 1 -10.4377 35.9442 DTGNWYSSDEDEGGS-p Q9UPT8;S808-p DTGNWYSSDEDEGGS 0.512739424025493 0.0610999358357444 0.0863333333333333 0.296 5.36110674746259 16.1668330606801 0.0863333333333333 0.296 0.290997545118329 0.0241722286642929 1.16984039760401 3.09807241935308 Q9UPT8 ZC3H4 Q9UPT8.S808.p_ZC3H4 Q9UPT8_S807sS808s_2_2_807_808 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22380.22591.4 16.46 16.46 1.206 10 2 2 0 1192.5414 4607.2112 S807s S808s TMT10 787 (R) LAESSKQDRENEEGDTGNWYssDEDEGGSSVTSILK (T) LAES(0.0)S(0.0)KQDRENEEGDT(0.0)GNWY(0.0)S(0.99)S(0.99)DEDEGGS(0.0)S(0.0)VT(0.0)S(0.0)ILK K:TMT10,s:Phosphorylated S ZC3H4 140881.7 15 14 427.1 318.7 HUMAN 1 5.3611 16.1668 DTGPQSLSGKSTPQP-p P35269;S433-p DTGPQSLSGKSTPQP 0.036022948076598 0.0118666492276053 0.573 0.645333333333333 33.4586958107073 26.9083218644641 0.573 0.645333333333333 0.000450952105434935 0.00203782935301683 7.55747826473017 5.53629927809667 P35269 GTF2F1 P35269.S433.p_GTF2F1 P35269_S433s _1_1_433_433 P35269 P35269 General transcription factor IIF subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9901.9901.2 10.65 10.65 1.37 3 1 1 0 706.3529 1331.7368 S433s Hydrogen 425 (R) LDTGPQSLsGK (S) LDT(0.0)GPQS(0.0)LS(0.99)GK K:TMT10-Lys-Only,s:Phosphorylated S GTF2F1 58296.5 4 8 1159.1 171.17 HUMAN 1 33.4587 26.9083 DTHKIKSSPSPEVVK-p Q15652;S639-p DTHKIKSSPSPEVVK 0.198599898076781 0.0399748344773625 -0.209333333333333 -0.276666666666667 13.6671427159253 18.7488297134976 -0.209333333333333 -0.276666666666667 0.0429819117764384 0.0133388082250403 -2.63200600052231 -3.6123179522027 Q15652 JMJD1C Q15652.S639.p_JMJD1C Q15652_S639sS641s_2_2_639_641 Q15652 Q15652|Q15652-3|A0A1W2PNZ9|Q15652-2 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15145.15145.5 8.32 8.32 1.125 3 2 2 0 495.2868 2312.4723 S639s S641s TMT10 636 (K) IKSsPsPEVVKPK (I) IKS(0.0)S(0.99)PS(0.99)PEVVKPK K:TMT10,s:Phosphorylated S JMJD1C 286573.8 8 21 377.1 336.35 HUMAN 1 -13.6671 -18.7488 DTKDRLGSPLAVDEA-p Q7RTP6;S1310-p DTKDRLGSPLAVDEA 0.842179784254459 0.0403246112007327 -0.0323333333333333 -0.324 1.44264705661078 18.6990945993892 -0.0323333333333333 -0.324 0.717356923707212 0.0134924413855712 -0.381500903335737 -3.60206217211732 Q7RTP6 MICAL3 Q7RTP6.S1310.p_MICAL3 Q7RTP6_S1310s _1_1_1310_1310 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18327.18327.3 14.41 14.41 99 1 1 1 0 607.6528 1740.9806 S1310s TMT10 1306 (K) DRLGsPLAVDEALR (R) DRLGS(1.0)PLAVDEALR s:Phosphorylated S MICAL3 225431.9 5 12 190.1 466.81 HUMAN 1 -1.4426 -18.6991 DTKVKPETPPRQSHS-p Q9UQ35;T983-p DTKVKPETPPRQSHS 0.963050595136198 0.138881378491189 0.007 0.181666666666667 0.314656709095032 11.2939229623449 0.00699999999999999 0.181666666666667 0.930110033002295 0.0742348275120839 0.0918654752477022 2.20665878647144 Q9UQ35 SRRM2 Q9UQ35.T983.p_SRRM2 Q9UQ35_T983t _1_1_983_983 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9876.9876.4 13.21 8.16 1.173 6 1 1 0 740.6558 2879.6346 T983t TMT10 979 (K) VKPEtPPRQSHSGSISPYPK (V) VKPET(0.99)PPRQS(0.0)HS(0.0)GS(0.0)IS(0.0)PY(0.0)PK K:TMT10,t:Phosphorylated T SRRM2 300351.7 11 44 2.1 3310.34 HUMAN 1 0.3147 11.2939 DTLGTAHSPKDGSSV-p Q9H1B7;S639-p DTLGTAHSPKDGSSV 0.309685834028237 0.0362104834575529 -0.204333333333333 0.316333333333333 9.52100008413237 19.4011741856437 -0.204333333333333 0.316333333333333 0.111660608848813 0.0114784324148396 -1.89859793212312 3.74822403922261 Q9H1B7 IRF2BPL Q9H1B7.S639.p_IRF2BPL Q9H1B7_S639s_1_1_639_639 Q9H1B7 Q9H1B7 Interferon regulatory factor 2-binding protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.35169.35169.5 26.48 26.48 1.102 8 1 1 0 740.9653 3619.85 N619n S639s TMT10 610 (R) TTPPESAPQnGPSPMAALMSVADTLGTAHsPK (D) T(0.0)T(0.0)PPES(0.0)APQN(1.0)GPS(0.0)PMAALMS(0.0)VADT(0.0)LGT(0.0)AHS(0.99)PK K:TMT10,n:Deamidated,s:Phosphorylated S IRF2BPL 83627.3 6 12 282.1 386.92 HUMAN 1 -9.521 19.4012 DTLRILPSQNVWFST-p Q8TDW7;S2735-p DTLRILPSQNVWFST 0.910912795817508 0.113248129466218 0.0173333333333333 0.178333333333333 0.794632884792839 12.474872242223 0.0173333333333333 0.178333333333333 0.832792320110955 0.056560439540725 0.221540058779107 2.41559629848386 Q8TDW7 FAT3 Q8TDW7.S2735.p_FAT3 Q8TDW7_S2735sS2741sT2742t_3_3_2735_2742 Q8TDW7 Q8TDW7|Q8TDW7-3|E9PQ73 Protocadherin Fat 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.38089.38089.4 7.53 5.19 1.165 5 3 3 0 1208.3486 4589.4971 S2735s S2741s T2742t N2744n TMT10 2732 (R) ILPsQNVWFstVnGERPENNKGGIFVIEQETGTIK (L) ILPS(0.99)QN(0.0)VWFS(0.99)T(0.99)VN(0.99)GERPEN(0.0)N(0.0)KGGIFVIEQET(0.0)GT(0.0)IK K:TMT10,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated FAT3 508994.1 2 4 4589.1 29.16 HUMAN 1 0.7946 12.4749 DTLSNPQSPQPSPYN-p Q96PU5;S479-p DTLSNPQSPQPSPYN 0.536318608089857 0.901272848642271 -0.126666666666667 -0.024 5.00532604939936 0.629636105210947 -0.126666666666667 -0.0239999999999999 0.315840192044942 0.865040397363049 -1.1050340454192 -0.178192497412407 Q96PU5 NEDD4L Q96PU5.S479.p_NEDD4L Q96PU5_S479s _1_1_479_479 Q96PU5 A0A1B0GVY1|Q96PU5|Q96PU5-7|Q96PU5-5|Q96PU5-6|Q96PU5-2 E3 ubiquitin-protein ligase NEDD4-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10151.10151.4 24.05 22.23 4.174 6 1 1 0 804.4196 3134.6838 S479s TMT10 472 (K) DTLSNPQsPQPSPYNSPKPQHK (V) DT(0.0)LS(0.0)NPQS(0.99)PQPS(0.0)PY(0.0)NS(0.0)PKPQHK K:TMT10,s:Phosphorylated S NEDD4L 112272 3 15 495.1 293.21 HUMAN 1 -5.0053 -0.6296 DTNAPDLSLEGPEGK-p Q09666;S1042-p DTNAPDLSLEGPEGK 0.96472530859038 0.26993716841888 0.00866666666666666 -0.133 0.302239390120835 7.4881399324381 0.00866666666666667 -0.133 0.932773202873984 0.178314231733026 0.0883539066641292 -1.54576022358621 Q09666 AHNAK Q09666.S1042.p_AHNAK Q09666_S1042s _1_1_1042_1042 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19822.19822.3 15.02 15.02 5.682 2 1 1 0 727.3688 2100.1225 S1042s TMT10 1034 (K) VDTNAPDLsLEGPEGK (L) VDT(0.0)NAPDLS(0.99)LEGPEGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 46 1.1 4313.36 HUMAN 1 0.3022 -7.4881 DTPPRLSTPQKGPST-p Q68DK7;T402-p DTPPRLSTPQKGPST 0.904729216051326 0.00589303770702603 0.0256666666666667 -0.553 0.854961753528995 32.2194002474688 0.0256666666666667 -0.553 0.82130378567642 0.000599873911997406 0.237090675649587 -7.12444487395488 Q68DK7 MSL1 Q68DK7.T402.p_MSL1 Q68DK7_T402t _1_1_402_402 Q68DK7 Q68DK7|J3KSZ8|J3QQY0|Q68DK7-2|Q68DK7-3 Male-specific lethal 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4571.4571.4 9.77 9.77 1.361 4 1 1 0 479.765 1836.0744 T402t Hydrogen 400 (R) LStPQKGPSTHPK (E) LS(0.0)T(0.99)PQKGPS(0.0)T(0.0)HPK K:TMT10-Lys-Only,t:Phosphorylated T MSL1 67811.9 4 11 324.1 362.01 HUMAN 1 0.855 -32.2194 DTQAVRHYKIWRRAG-p Q13882;Y127-p DTQAVRHYKIWRRAG 0.97158608608734 0.0245844699620495 0.00966666666666666 0.388333333333333 0.244237217520342 21.9052754089507 0.00966666666666666 0.388333333333333 0.94531441019604 0.00644870423949387 0.0718339401528532 4.29578430577598 Q13882 PTK6 Q13882.Y127.p_PTK6 Q13882_Y127y _1_1_127_127 Q13882 Q13882 Protein-tyrosine kinase 6 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.5345.5345.4 15.25 11.57 15.246 2 1 1 0 414.7219 1575.9007 Y127y TMT10 120 (R) DTQAVRHyK (I) DT(0.0)QAVRHY(0.99)K K:TMT10,y:Phosphorylated Y PTK6 52403.8 2 2 33.1 58.07 HUMAN 1 0.2442 21.9053 DTQIKRNTFVGTPFW-p B4E0Y9;T200-p DTQIKRNTFVGTPFW 0.498264027312711 0.00507942483656417 -0.147666666666667 0.604 5.57328924573301 33.4256043723786 -0.147666666666667 0.604 0.277122045150703 0.000454401297469158 -1.20815650157246 7.53221203127494 B4E0Y9 NotFound B4E0Y9.T200.p_NotFound B4E0Y9_T200t_1_1_200_200 B4E0Y9 B4E0Y9|Q9P289|Q8NBY1|Q9P289-3|Q9P289-2 Serine/threonine-protein kinase 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28478.28478.3 21.92 21.92 1.141 5 1 1 0 1109.5447 3230.6709 T200t M208m TMT10 198 (K) RNtFVGTPFWmAPEVIQQSAYDSK (A) RNT(0.99)FVGT(0.0)PFWM(1.0)APEVIQQS(0.0)AY(0.0)DS(0.0)K K:TMT10,t:Phosphorylated T,m:Oxidized methionine STK26 49468.3 6 2 982.2 192.43 HUMAN 1 -5.5733 33.4256 DTQSLSLSEESPSKE-p E9PGC8;S1438-p DTQSLSLSEESPSKE 0.563810063757983 0.403431898638967 -0.0823333333333333 -0.0793333333333333 4.58520776860813 5.24399094252942 -0.0823333333333334 -0.0793333333333333 0.347919862594241 0.298951616262244 -1.02746539352273 -1.14834679227199 E9PGC8 NotFound E9PGC8.S1438.p_NotFound E9PGC8_S1438sS1441s_2_2_1438_1441 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23019.23019.4 12.15 12.15 1.259 11 2 2 0 1100.0333 4237.1603 S1438s S1441s TMT10 1422 (K) DRWPEVSPEDTQSLSLsEEsPSKETSLDVSSK (Q) DRWPEVS(0.0)PEDT(0.0)QS(0.0)LS(0.0)LS(0.99)EES(0.99)PS(0.0)KET(0.0)S(0.0)LDVS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S MAP1A 332906.7 3 51 20.1 1016.98 HUMAN 1 -4.5852 -5.244 DTQSLVGSPSTRIAP-p Q9NZN5;S341-p DTQSLVGSPSTRIAP 0.384620913819272 0.0557071274493219 0.287 -0.417666666666667 7.68269690999897 16.7098990217032 0.287 -0.417666666666667 0.170502326379773 0.0213309450938953 1.58006372988104 -3.20332426270709 Q9NZN5 ARHGEF12 Q9NZN5.S341.p_ARHGEF12 Q9NZN5_S341s _1_1_341_341 Q9NZN5 Q9NZN5 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20963.20963.4 23.79 23.79 1.797 9 1 1 0 919.7045 3595.8379 S341s TMT10 318 (R) IYLEENPEKSETIQDTDTQSLVGsPSTR (I) IY(0.0)LEENPEKS(0.0)ET(0.0)IQDT(0.0)DT(0.0)QS(0.0)LVGS(0.99)PS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S ARHGEF12 174199.1 3 5 251.1 406.16 HUMAN 1 7.6827 -16.7099 DTRDDDRTPGLHGDC-p O95159;T223-p DTRDDDRTPGLHGDC 0.383153545070815 0.168262334196269 -0.162 -0.32 7.71210770084985 10.1807973614635 -0.162 -0.32 0.169351571061176 0.095922450243714 -1.58517561333762 -2.01230898386416 O95159 ZFPL1 O95159.T223.p_ZFPL1 O95159_T223t _1_1_223_223 O95159 O95159 Zinc finger protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6917.6917.4 9.01 9.01 9.007 2 1 1 0 672.7988 2608.2098 T223t TMT10 219 (R) DDDRtPGLHGDCDDDKYR (R) DDDRT(0.99)PGLHGDCDDDKY(0.0)R C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ZFPL1 34855.1 1 1 6862.1 9.01 HUMAN 1 -7.7121 -10.1808 DTRGRSISFPALLPI-p O60296;S420-p DTRGRSISFPALLPI 0.424703032265256 0.213626400311739 0.271 0.129 6.85376948856205 8.81994417409153 0.271 0.129 0.206358827277539 0.131221676665748 1.43539126889522 1.77656975719951 O60296 TRAK2 O60296.S420.p_TRAK2 O60296_S420s _1_1_420_420 O60296 O60296 Trafficking kinesin-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35304.35304.3 15.63 15.63 2.101 3 1 1 0 626.6766 1798.0424 S420s TMT10 418 (R) SIsFPALLPIPGSNR (S) S(0.0)IS(0.99)FPALLPIPGS(0.0)NR s:Phosphorylated S TRAK2 102330.1 1 1 3071.1 61.56 HUMAN 1 6.8538 8.8199 DTRGSYGSDAEEEEY-p A0A1B0GTW1;S1218-p DTRGSYGSDAEEEEY 0.352645276788012 0.0845134309507297 0.136666666666667 -0.195666666666667 8.40589172509396 14.2058731783986 0.136666666666667 -0.195666666666667 0.144348018798422 0.0379675594953235 1.70550935766931 -2.72912963841166 A0A1B0GTW1 NotFound A0A1B0GTW1.S1218.p_NotFound A0A1B0GTW1_S1218s _1_1_1218_1218 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11541.11541.5 20.08 20.08 4.055 6 1 1 0 594.2745 2887.3746 S1218s TMT10 1214 (R) GSYGsDAEEEEYRQQLSEHSK (R) GS(0.0)Y(0.0)GS(0.99)DAEEEEY(0.0)RQQLS(0.0)EHS(0.0)K K:TMT10,s:Phosphorylated S TJP2 141123.7 7 31 41.1 827.72 HUMAN 1 8.4059 -14.2059 DTRKKDASDDLDDLN-p P20042;S67-p DTRKKDASDDLDDLN 0.168210601929357 0.727962211526179 -0.241 -0.0446666666666666 15.449155257479 1.89839661362966 -0.241 -0.0446666666666666 0.0285157287059005 0.645892644293901 -2.96312279737694 -0.48612639033038 P20042 EIF2S2 P20042.S67.p_EIF2S2 P20042_S67s _1_1_67_67 P20042 P20042 Eukaryotic translation initiation factor 2 subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25788.25788.4 17.06 17.06 99 1 1 1 0 663.8324 2572.3498 S67s TMT10 65 (K) DAsDDLDDLNFFNQKK (K) DAS(1.0)DDLDDLNFFNQKK K:TMT10,s:Phosphorylated S EIF2S2 38730.1 10 3 622.1 259.62 HUMAN 1 -15.4492 -1.8984 DTRPAEQSLDMEEKD-p Q9H4G0;S60-p DTRPAEQSLDMEEKD 0.101898773560751 0.0366324050433271 -0.526666666666667 0.516 20.9816918898703 19.3216294127416 -0.526666666666667 0.516 0.0079768387139671 0.0116906069334899 -4.09287156846312 3.73151190806085 Q9H4G0 EPB41L1 Q9H4G0.S60.p_EPB41L1 Q9H4G0_S60s _1_1_60_60 Q9H4G0 Q9H4G0|A0A0C4DH22 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8321.8321.4 9.25 9.25 3.882 3 1 1 0 691.8309 2684.335 S60s TMT10 48 (K) HPSQQDTRPAEQsLDMEEK (D) HPS(0.0)QQDT(0.0)RPAEQS(0.99)LDMEEK K:TMT10,s:Phosphorylated S EPB41L1 99071.6 1 3 174.1 483.37 HUMAN 1 -20.9817 19.3216 DTRSLEISQSYTTTQ-p Q13315;S367-p DTRSLEISQSYTTTQ 0.752428078179286 0.0755847656453762 0.0453333333333333 0.214666666666667 2.3567675700805 14.8866170082696 0.0453333333333333 0.214666666666667 0.581196838184175 0.0324592364219006 0.586437402178085 2.85536703183244 Q13315 ATM Q13315.S367.p_ATM Q13315_S367s _1_1_367_367 Q13315 Q13315 Serine-protein kinase ATM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14390.14390.2 14.43 14.43 2.219 7 1 1 0 911.9454 1742.9122 S367s TMT10 363 (R) SLEIsQSYTTTQR (E) S(0.0)LEIS(0.99)QS(0.0)Y(0.0)T(0.0)T(0.0)T(0.0)QR s:Phosphorylated S ATM 355759 4 1 2613.1 76.72 HUMAN 1 2.3568 14.8866 DTSANVKSAGEGEVE-p Q6UX04;S299-p DTSANVKSAGEGEVE 0.0635370415880919 0.00643036349952778 0.872666666666667 -0.518 25.8565143819611 31.5201434203585 0.872666666666667 -0.518 0.00259626226862127 0.00070466979773806 5.26402797424473 -6.89663164376552 Q6UX04 CWC27 Q6UX04.S299.p_CWC27 Q6UX04_S299s _1_1_299_299 Q6UX04 Q6UX04|Q6UX04-2|D6REK3 Peptidyl-prolyl cis-trans isomerase CWC27 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10370.10370.3 14.9 14.9 3.326 3 1 1 0 796.7444 2308.2599 S299s TMT10 292 (K) DTSANVKsAGEGEVEK (K) DT(0.0)S(0.0)ANVKS(0.99)AGEGEVEK K:TMT10,s:Phosphorylated S CWC27 54017.3 2 2 3229.1 56.56 HUMAN 1 25.8565 -31.5201 DTSATSQSVNGSPQA-p Q86WB0;S58-p DTSATSQSVNGSPQA 0.111154875717767 0.00897932536569054 0.288333333333333 0.431333333333333 19.9393681605793 28.9883234368312 0.288333333333333 0.431333333333333 0.0101405890678818 0.00126231474823349 3.86595018979584 6.12085348814923 Q86WB0 ZC3HC1 Q86WB0.S58.p_ZC3HC1 Q86WB0_S58sS62s_2_2_58_62 Q86WB0 Q86WB0|Q86WB0-2|C9J0I9|Q86WB0-3 Nuclear-interacting partner of ALK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14026.14026.3 21.96 21.96 2.26 10 2 2 0 1052.1543 2994.4904 S58s S62s TMT10 51 (K) DTSATSQsVNGsPQAEQPSLESTSK (E) DT(0.0)S(0.0)AT(0.0)S(0.0)QS(0.99)VNGS(0.99)PQAEQPS(0.0)LES(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ZC3HC1 56401.6 6 14 624.1 258.98 HUMAN 1 19.9394 28.9883 DTSESELSEGELERR-p F8VU11;S873-p DTSESELSEGELERR 0.192059131883792 0.285899610038395 0.242 -0.162333333333333 13.9874737367071 7.17467134715443 0.242 -0.162333333333333 0.039925708012365 0.191660609663301 2.69061893001364 -1.49113288127179 F8VU11 PRPF40B F8VU11.S873.p_PRPF40B F8VU11_S873s _1_1_873_873 F8VU11 F8VU11|Q6NWY9|Q6NWY9-3|Q6NWY9-2 PRP40 pre-mRNA processing factor 40 homolog B (Yeast), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16454.16454.3 17.76 14.81 2.435 5 1 1 0 907.4275 2640.3041 S873s TMT10 861 (K) EKTGWDTSESELsEGELER (R) EKT(0.0)GWDT(0.0)S(0.0)ES(0.0)ELS(0.99)EGELER K:TMT10,s:Phosphorylated S PRPF40B 101691.8 2 4 1236.1 163.46 HUMAN 1 13.9875 -7.1747 DTSGSELSEGELEKR-p O75400;S938-p DTSGSELSEGELEKR 0.164616537021326 0.0814348975501825 0.247666666666667 -0.192333333333333 15.6901676295329 14.4410119433194 0.247666666666667 -0.192333333333333 0.0269763530676698 0.0359665520246295 3.00892273773531 -2.77252797877644 O75400 PRPF40A O75400.S938.p_PRPF40A O75400_S938s _1_1_938_938 O75400 O75400|O75400-3|O75400-2 Pre-mRNA-processing factor 40 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15382.15382.4 19.91 23.18 6.561 6 1 1 0 863.4433 3370.7784 S938s TMT10 922 (K) KTGKDSGNWDTSGSELsEGELEK (R) KT(0.0)GKDS(0.0)GNWDT(0.0)S(0.0)GS(0.0)ELS(0.99)EGELEK K:TMT10,s:Phosphorylated S PRPF40A 109088.4 9 10 718.2 237.38 HUMAN 1 15.6902 -14.441 DTSPCPNSPVFRTGS-p O75815;S363-p DTSPCPNSPVFRTGS 0.610770564629011 0.3016616965161 0.085 0.108 3.96618095719498 6.87034219603612 0.085 0.108 0.401219381669419 0.205572861144914 0.910659539177624 1.437907755843 O75815 BCAR3 O75815.S363.p_BCAR3 O75815_S363s _1_1_363_363 O75815 O75815|O75815-3|O75815-2 Breast cancer anti-estrogen resistance protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18838.18838.3 7.11 7.11 1.201 5 1 1 0 817.7247 2371.1914 S363s TMT10 348 (K) LPPQSSGVDTSPCPNsPVFR (T) LPPQS(0.0)S(0.0)GVDT(0.0)S(0.0)PCPNS(0.99)PVFR C:Carbamidomethylation,s:Phosphorylated S BCAR3 93533.8 1 10 401.1 327.42 HUMAN 1 3.9662 6.8703 DTSPRHLSNVSSTGS-p P10636;S726-p DTSPRHLSNVSSTGS 0.968294964714065 0.135614201069161 0.00633333333333333 0.185666666666667 0.273331345958699 11.4356800948512 0.00633333333333333 0.185666666666667 0.939002752690633 0.0718508632823456 0.0801447678761912 2.23156835465845 P10636 MAPT P10636.S726.p_MAPT P10636_S726s _1_1_726_726 P10636 P10636|A0A0G2JPD5|A0A0G2JQJ7|P10636-8|P10636-7|P10636-5|P10636-6|P10636-4|P10636-2|I3L170|P10636-3|P10636-9|A0A0G2JMX7|A0A0G2JS76 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36075.36075.4 14.77 9.98 1.156 9 1 1 0 888.9388 3472.7679 S726s Hydrogen 724 (R) HLsNVSSTGSIDMVDSPQLATLADEVSASLAK (Q) HLS(0.99)NVS(0.0)S(0.0)T(0.0)GS(0.0)IDMVDS(0.0)PQLAT(0.0)LADEVS(0.0)AS(0.0)LAK K:TMT10-Lys-Only,s:Phosphorylated S MAPT 79154.4 8 24 119.1 551.6 HUMAN 1 0.2733 11.4357 DTSQEICSPRLPISA-p P52948;S1028-p DTSQEICSPRLPISA 0.395835711166129 0.443102223065706 -0.142666666666667 0.227666666666667 7.42633051335197 4.70785079392047 -0.142666666666667 0.227666666666667 0.180870170785422 0.338232176764376 -1.53545286181722 1.05003576831754 P52948 NUP98 P52948.S1028.p_NUP98 P52948_S1028s _1_1_1028_1028 P52948 P52948|P52948-5 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6815.6815.2 12.36 12.36 12.356 3 1 1 0 786.8492 1492.7263 S1028s TMT10 1020 (K) ADTSQEICsPR (L) ADT(0.0)S(0.0)QEICS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S NUP98 198716.8 1 18 187.1 472.84 HUMAN 1 -7.4263 4.7079 DTSRSDESPKPGKFQ-p Q9NQW6;S642-p DTSRSDESPKPGKFQ 0.169869075721942 0.00211428234964463 0.386666666666667 -1.26866666666667 15.3588379962348 41.5913014593772 0.386666666666667 -1.26866666666667 0.0291149601738797 6.93218036784651e-05 2.94602640780783 -10.870787199964 Q9NQW6 ANLN Q9NQW6.S642.p_ANLN Q9NQW6_S642s _1_1_642_642 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4549.4549.4 12.57 12.57 1.53 4 1 1 0 543.5386 2091.1649 S642s TMT10 635 (K) DTSRSDEsPKPGK (F) DT(0.0)S(0.0)RS(0.0)DES(0.99)PKPGK K:TMT10,s:Phosphorylated S ANLN 125566 13 43 68.1 675.08 HUMAN 1 15.3588 -41.5913 DTSSLTQSAPASPTN-p Q8N122;S859-p DTSSLTQSAPASPTN 0.976111830837964 0.872719658475737 -0.005 -0.016 0.205293934730413 0.833952701485685 -0.005 -0.016 0.953829184569736 0.825286478819101 -0.060631347684159 -0.231670057788732 Q8N122 RPTOR Q8N122.S859.p_RPTOR Q8N122_S859s _1_1_859_859 Q8N122 Q8N122|Q8N122-3 Regulatory-associated protein of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18788.18788.3 18.44 18.44 1.209 7 1 1 0 785.7468 2275.2546 S859s TMT10 850 (R) VLDTSSLTQsAPASPTNK (G) VLDT(0.0)S(0.0)S(0.0)LT(0.0)QS(0.99)APAS(0.0)PT(0.0)NK K:TMT10,s:Phosphorylated S RPTOR 150746.6 3 5 1778.1 115.46 HUMAN 1 -0.2053 -0.834 DTSSSDFTILQEIEE-p Q15424;T200-p DTSSSDFTILQEIEE 0.433870198885374 0.163506758978459 -0.214 0.155 6.68357831721548 10.3398053062037 -0.214 0.155 0.21460615238642 0.0924739628997153 -1.40550346762496 2.03995632753945 Q15424 SAFB Q15424.T200.p_SAFB Q15424_T200t _1_1_200_200 Q15424 Q15424|Q15424-3|Q15424-4 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31849.31849.5 20.92 20.92 1.276 7 1 1 0 1170.5823 5768.9009 T200t TMT10 173 (K) ELPEQLQEHAIEDKETINNLDTSSSDFtILQEIEEPSLEPENEK (I) ELPEQLQEHAIEDKET(0.0)INNLDT(0.0)S(0.0)S(0.0)S(0.0)DFT(0.99)ILQEIEEPS(0.0)LEPENEK K:TMT10,t:Phosphorylated T SAFB 103096.3 17 18 83.1 629.62 HUMAN 1 -6.6836 10.3398 DTSTERRSSDSWEVW-p Q8N6T3;S360-p DTSTERRSSDSWEVW 0.553785383781856 0.0737907396976703 0.0973333333333333 0.213666666666667 4.7383986279234 15.0262319371052 0.0973333333333333 0.213666666666667 0.335861433447926 0.0314323467126203 1.05589264256701 2.88148811733547 Q8N6T3 ARFGAP1 Q8N6T3.S360.p_ARFGAP1 Q8N6T3_S360s _1_1_360_360 Q8N6T3 Q8N6T3-2|Q8N6T3-5|F8VWH9|Q8N6T3-4 ADP-ribosylation factor GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19916.19916.2 14.01 14.01 2.191 6 1 1 0 989.43 1897.8878 S360s TMT10 360 (R) sSDSWEVWGSASTNR (N) S(0.99)S(0.0)DS(0.0)WEVWGS(0.0)AS(0.0)T(0.0)NR s:Phosphorylated S ARFGAP1 45009.4 20 15 243.1 413.25 HUMAN 1 4.7384 15.0262 DTSYVIESDEDLEME-p Q14191;S467-p DTSYVIESDEDLEME 0.430275482317801 0.139447123803519 0.11 0.155333333333333 6.74401996474814 11.2731132806498 0.11 0.155333333333333 0.211640122153961 0.0745913851379213 1.41612658491826 2.20300557337124 Q14191 WRN Q14191.S467.p_WRN Q14191_S467s _1_1_467_467 Q14191 Q14191 Werner syndrome ATP-dependent helicase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26142.26142.4 16.58 12.89 2.205 5 1 1 0 927.1727 3625.6926 S467s TMT10 451 (K) HLSPNDNENDTSYVIEsDEDLEMEMLK (S) HLS(0.0)PNDNENDT(0.0)S(0.0)Y(0.0)VIES(0.99)DEDLEMEMLK K:TMT10,s:Phosphorylated S WRN 164512 2 1 3102.1 60.61 HUMAN 1 6.744 11.2731 DTTAINKSYYNVVLQ-p Q14155-5;S177-p DTTAINKSYYNVVLQ 0.0157733899460579 0.0532675001149767 -0.924 -0.282666666666667 42.5344594963202 16.9853753965124 -0.924 -0.282666666666667 5.57897031214597e-05 0.0200199256539329 -11.3606865758353 -3.25727557604486 Q14155 ARHGEF7 Q14155.5.S177.p_ARHGEF7 Q14155-5_S177s _1_1_177_177 Q14155-5 Q14155|Q14155-3|Q14155-2|Q14155-5|B1ALK7|Q14155-1|Q14155-6 Isoform 5 of Rho guanine nucleotide exchange factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37074.37074.3 22.54 22.54 1.29 6 1 1 0 948.8076 2764.4445 S177s TMT10 177 (K) sYYNVVLQNILETENEYSK (E) S(0.99)Y(0.0)Y(0.0)NVVLQNILET(0.0)ENEY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ARHGEF7 83311.3 2 3 434.1 313.68 HUMAN 1 -42.5345 -16.9854 DTTKECDSDDNMGAK-p Q9Y4E5;S1027-p DTTKECDSDDNMGAK 0.1560557092084 0.0078345649628161 -0.627 0.591333333333333 16.2011610391127 30.0454191188022 -0.627 0.591333333333333 0.0239819170281602 0.000989596357600612 -3.1069111949654 6.43573295855295 Q9Y4E5 ZNF451 Q9Y4E5.S1027.p_ZNF451 Q9Y4E5_S1027s _1_1_1027_1027 Q9Y4E5 Q9Y4E5|Q9Y4E5-2 E3 SUMO-protein ligase ZNF451 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8216.8216.2 13.83 13.83 99 1 1 1 0 890.3693 1699.7668 S1027s TMT10 1024 (K) ECDsDDNMGAK (N) ECDS(1.0)DDNMGAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF451 124335 3 4 1774.1 115.94 HUMAN 1 -16.2012 30.0454 DTTVISHSPNTSYDT-p Q4VCS5;S714-p DTTVISHSPNTSYDT 0.128023476673973 0.0163827303231655 0.923333333333333 -0.896666666666667 18.48565835648 24.6616508541975 0.923333333333334 -0.896666666666667 0.0141720985722397 0.00341849472888393 3.56122872662148 -4.95251801303747 Q4VCS5 AMOT Q4VCS5.S714.p_AMOT Q4VCS5_S714s _1_1_714_714 Q4VCS5 Q4VCS5|E7ERM3|Q4VCS5-2|A6NP16 Angiomotin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14146.14146.3 14.12 14.12 1.718 8 1 1 0 829.7235 2407.1939 S714s TMT10 707 (R) DTTVISHsPNTSYDTALEAR (I) DT(0.0)T(0.0)VIS(0.0)HS(0.99)PNT(0.0)S(0.0)Y(0.0)DT(0.0)ALEAR s:Phosphorylated S AMOT 118539.8 1 1 6081.1 14.12 HUMAN 1 18.4857 -24.6617 DTVIGAGTPPGLAEP-p Q9H6A9;T370-p DTVIGAGTPPGLAEP 0.903152481449396 0.420921030447781 0.0183333333333333 0.0793333333333333 0.86811469216172 5.00178296089742 0.0183333333333333 0.0793333333333333 0.818820167519118 0.316097967908738 0.240461151491351 1.10416160041398 Q9H6A9 PCNXL3 Q9H6A9.T370.p_PCNXL3 Q9H6A9_T370t _1_1_370_370 Q9H6A9 Q9H6A9|Q9H6A9-2 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.31750.31750.5 25.15 25.15 4.028 3 1 1 0 595.3377 2892.6963 T370t TMT10 361 (R) SFDTVIGAGtPPGLAEPLLVVRPK (D) S(0.0)FDT(0.0)VIGAGT(0.99)PPGLAEPLLVVRPK K:TMT10,t:Phosphorylated T PCNX3 224430.8 6 12 168.1 492.45 HUMAN 1 0.8681 5.0018 DVALSQDSTYQGERA-p Q92900;S1110-p DVALSQDSTYQGERA 0.418116670228811 0.812289893223742 -0.164333333333333 0.043 6.98755236000219 1.26612723207028 -0.164333333333333 0.043 0.200098928932961 0.747114691836445 -1.4588341426766 0.339328258593193 Q92900 UPF1 Q92900.S1110.p_UPF1 Q92900_S1107sS1110s_2_2_1107_1110 Q92900 Q92900|Q92900-2 Regulator of nonsense transcripts 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17672.17672.2 15.26 15.26 1.158 5 2 2 0 1143.4984 2126.0563 S1107s S1110s TMT10 1100 (K) SQIDVALsQDsTYQGER (A) S(0.0)QIDVALS(0.99)QDS(0.99)T(0.0)Y(0.0)QGER s:Phosphorylated S UPF1 125655.3 2 3 4383.1 32.23 HUMAN 1 -6.9876 1.2661 DVAPTLMSVPRYLPR-p A0A087WXI5;S814-p DVAPTLMSVPRYLPR 0.877094962549661 0.351059470019555 -0.024 -0.103 1.11899370313982 6.0254040359681 -0.024 -0.103 0.772859642433073 0.249723605368506 -0.303466053897921 -1.28878005187476 A0A087WXI5 NotFound A0A087WXI5.S814.p_NotFound A0A087WXI5_S814s _1_1_814_814 A0A087WXI5 A0A087WXI5|P12830|P12830-2 Cadherin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19293.19293.3 13.17 13.17 1.616 2 1 1 0 536.9379 1528.8355 S814s TMT10 806 (R) NDVAPTLMsVPR (Y) NDVAPT(0.0)LMS(0.99)VPR s:Phosphorylated S CDH1 100652.9 7 3 3059.1 61.78 HUMAN 1 -1.119 -6.0254 DVDDGSGSPHSPHQL-p Q9H4A3-7;S2442-p DVDDGSGSPHSPHQL 0.429621058024935 0.0529111182306038 0.132666666666667 0.227166666666667 6.7552801053747 17.027050401938 0.132666666666667 0.227166666666667 0.211092104409056 0.0198287327673473 1.41810455840042 3.26547130531229 Q9H4A3 WNK1 Q9H4A3.7.S2442.p_WNK1 Q9H4A3-7_S2442sS2445s_2_2_2442_2445 Q9H4A3-7 Q9H4A3|Q9H4A3-2|F5GWT4|Q9H4A3-4|Q9H4A3-7|Q9H4A3-6|Q9H4A3-5 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7985.7985.4 13.74 13.74 1.107 5 2 2 0 617.7783 2308.157 S2442s S2445s TMT10 2435 (R) DVDDGSGsPHsPHQLSSK (S) DVDDGS(0.0)GS(0.99)PHS(0.99)PHQLS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S WNK1 301202.7 8 30 162.1 495.27 HUMAN 2 6.7553 17.0271 DVDLCLVSPCEFEHR-p Q66K74;S741-p DVDLCLVSPCEFEHR 0.383090443555865 0.0734317753531384 -0.147333333333333 -0.254 7.71499823051405 15.0589751515618 -0.147333333333333 -0.254 0.169238893398187 0.0311962566673467 -1.58567795542807 -2.88762595608248 Q66K74 MAP1S Q66K74.S741.p_MAP1S Q66K74_S741s _1_1_741_741 Q66K74 Q66K74|Q66K74-2 Microtubule-associated protein 1S HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17596.17596.5 18.43 18.43 16.813 3 1 1 0 605.095 2941.4701 S741s TMT10 729 (R) SASPHDVDLCLVsPCEFEHRK (A) S(0.0)AS(0.0)PHDVDLCLVS(0.99)PCEFEHRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP1S 113179.3 2 10 456.1 307.14 HUMAN 1 -7.715 -15.059 DVDLDRQSLSSIDKN-p Q9Y6D5;S1511-p DVDLDRQSLSSIDKN 0.320322868816563 0.0714174561782472 -0.23 0.315666666666667 9.25373011024028 15.2377248648829 -0.23 0.315666666666667 0.118748187345488 0.0299383260261968 -1.85229405309755 2.92121333978543 Q9Y6D5 ARFGEF2 Q9Y6D5.S1511.p_ARFGEF2 Q9Y6D5_S1511s _1_1_1511_1511 Q9Y6D5 Q9Y6D5 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15068.15068.4 18.97 10.32 1.176 4 1 1 0 741.3808 2882.5372 S1511s TMT10 1502 (K) HLDVDLDRQsLSSIDKNPSER (G) HLDVDLDRQS(0.99)LS(0.0)S(0.0)IDKNPS(0.0)ER K:TMT10,s:Phosphorylated S ARFGEF2 204545.1 6 9 205.1 448.88 HUMAN 1 -9.2537 15.2377 DVDLSLGSPKLKGDI-p Q09666;S511-p DVDLSLGSPKLKGDI 0.429599093462525 0.0192918570550088 -0.2 -0.359 6.75623780192088 23.5596458811147 -0.2 -0.359 0.211045559979135 0.00440590787324201 -1.41827277328483 -4.68257715344704 Q09666 AHNAK Q09666.S511.p_AHNAK Q09666_S511s _1_1_511_511 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26844.27049.3 20.61 20.61 2.208 3 1 1 0 676.6885 1948.0825 S511s TMT10 500 (K) ISMQDVDLSLGsPK (L) IS(0.0)MQDVDLS(0.0)LGS(0.99)PK K:TMT10,s:Phosphorylated S AHNAK 629603.7 15 26 1.1 4313.36 HUMAN 1 -6.7562 -23.5596 DVDNDDVSLKSFEPA-p A0A1B0GVH5;S355-p DVDNDDVSLKSFEPA 0.405599270487362 0.0277238968700976 -0.118 0.305333333333333 7.23746190258041 21.1122656554071 -0.118 0.305333333333333 0.18890950487018 0.00774057876956095 -1.50251898750618 4.11769596798642 A0A1B0GVH5 NotFound A0A1B0GVH5.S355.p_NotFound A0A1B0GVH5_S355s _1_1_355_355 A0A1B0GVH5 A0A1B0GVH5|A0A1B0GTC3|Q9C0B1|A0A1B0GU26|A0A1B0GTC5|A0A1B0GV98 Alpha-ketoglutarate-dependent dioxygenase FTO HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23040.23040.3 19.72 17.69 99 1 1 1 0 953.7766 2779.3643 S355s TMT10 338 (R) CQLALQNVCDDVDNDDVsLK (S) CQLALQNVCDDVDNDDVS(1.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FTO 65116.6 1 3 2107.1 97.42 HUMAN 1 -7.2375 21.1123 DVDPQEHSFTRTIDE-p Q15751;S1342-p DVDPQEHSFTRTIDE 0.300871929670026 0.930938262261506 0.195666666666667 -0.0193333333333333 9.79630901966511 0.438929907182841 0.195666666666667 -0.0193333333333334 0.104801885954885 0.903872158557865 1.94634313154515 -0.126530076154482 Q15751 HERC1 Q15751.S1342.p_HERC1 Q15751_S1342s _1_1_1342_1342 Q15751 Q15751 Probable E3 ubiquitin-protein ligase HERC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16403.16403.3 17.55 17.55 1.164 4 1 1 0 890.7284 2590.2007 S1342s TMT10 1326 (R) WISENQDSADVDPQEHsFTR (T) WIS(0.0)ENQDS(0.0)ADVDPQEHS(0.99)FT(0.0)R s:Phosphorylated S HERC1 539122.1 1 2 269.1 394.57 HUMAN 1 9.7963 -0.4389 DVDVSEDSPPPLPER-p Q05209;S673-p DVDVSEDSPPPLPER 0.613536698135729 0.243470238507773 -0.0946666666666667 0.127333333333333 3.93550768197798 8.08294622360892 -0.0946666666666667 0.127333333333333 0.404063137541369 0.15549104332849 -0.904781620413467 1.64901817963804 Q05209 PTPN12 Q05209.S673.p_PTPN12 Q05209_S673s _1_1_673_673 Q05209 Q05209|Q05209-3|Q05209-2 Tyrosine-protein phosphatase non-receptor type 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16289.16289.2 16.96 14.78 2.182 2 1 1 0 980.9592 1880.9439 S673s TMT10 666 (K) DVDVSEDsPPPLPER (T) DVDVS(0.0)EDS(0.99)PPPLPER s:Phosphorylated S PTPN12 88960.6 2 13 644.1 254.82 HUMAN 1 -3.9355 8.0829 DVEDMELSDVEDDGS-p Q5VT52;S374-p DVEDMELSDVEDDGS 0.55953726371985 0.715310489505581 -0.104333333333333 0.0476666666666667 4.65407279421938 2.00151139449809 -0.104333333333333 0.0476666666666667 0.342446491128144 0.630737802307389 -1.04026580746733 0.509077600932599 Q5VT52 RPRD2 Q5VT52.S374.p_RPRD2 Q5VT52_S374s _1_1_374_374 Q5VT52 Q5VT52|Q5VT52-3|Q5VT52-2|Q5VT52-5 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19034.19034.4 20.65 18.75 6.787 5 1 1 0 872.8976 3408.6001 S374s TMT10 356 (K) SATPEPVTDNRDVEDMELsDVEDDGSK (I) S(0.0)AT(0.0)PEPVT(0.0)DNRDVEDMELS(0.99)DVEDDGS(0.0)K K:TMT10,s:Phosphorylated S RPRD2 156473.2 8 1 172.1 488.65 HUMAN 1 -4.6541 2.0015 DVEDSGESEEEGATD-p P15822;S495-p DVEDSGESEEEGATD 0.674553852682581 0.166444982529729 0.0603333333333333 0.143666666666667 3.20456645331374 10.2410968008825 0.0603333333333333 0.143666666666667 0.478127094149262 0.0945998221485917 0.761664424324245 2.02278977156882 P15822 HIVEP1 P15822.S495.p_HIVEP1 P15822_S492sS495s_2_2_492_495 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22445.22445.5 19.29 19.29 1.15 5 2 2 0 978.8744 4730.3256 S492s S495s TMT10 482 (K) ALSIHSDVEDsGEsEEEGATDERQHDLGAMELQPVHIIK (R) ALS(0.0)IHS(0.0)DVEDS(0.99)GES(0.99)EEEGAT(0.0)DERQHDLGAMELQPVHIIK K:TMT10,s:Phosphorylated S HIVEP1 299483.8 1 35 82.1 631.69 HUMAN 1 3.2046 10.2411 DVEFDIKSPKFKAEA-p Q09666;S5099-p DVEFDIKSPKFKAEA 0.0659805589016084 0.006371249808731 -0.406666666666667 -0.845333333333333 25.4484847199504 31.6039394853999 -0.406666666666667 -0.845333333333334 0.00285201317879629 0.000691203695564348 -5.15826834697824 -6.92360937115329 Q09666 AHNAK Q09666.S5099.p_AHNAK Q09666_S5099s _1_1_5099_5099 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29141.29141.3 16.99 16.99 8.751 2 1 1 0 828.4383 2403.3237 S5099s TMT10 5088 (K) MYFPDVEFDIKsPK (F) MY(0.0)FPDVEFDIKS(0.99)PK K:TMT10,s:Phosphorylated S AHNAK 629603.7 7 117 1.1 4313.36 HUMAN 1 -25.4485 -31.6039 DVELNLKSPKVKGDL-p Q09666;S3426-p DVELNLKSPKVKGDL 0.0832139716415161 0.0058535409001474 -0.486666666666667 -0.832333333333333 23.0658525550918 32.2681807464041 -0.486666666666667 -0.832333333333334 0.00493645002242338 0.000593173752210201 -4.57001216176647 -7.14056781890878 Q09666 AHNAK Q09666.S3426.p_AHNAK Q09666_S3426s _1_1_3426_3426 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23927.23927.4 16.6 16.6 7.665 2 1 1 0 581.8287 2244.3241 S3426s TMT10 3415 (K) VSMPDVELNLKsPK (V) VS(0.0)MPDVELNLKS(0.99)PK K:TMT10,s:Phosphorylated S AHNAK 629603.7 7 87 1.1 4313.36 HUMAN 1 -23.0659 -32.2682 DVEVPDVSLEGPEGK-p Q09666;S1298-p DVEVPDVSLEGPEGK 0.573631485695544 0.439623607690392 -0.108333333333333 0.112 4.4418779828579 4.75417241778936 -0.108333333333333 0.112 0.359593805426239 0.334643780775936 -1.00070739722228 1.0586049879131 Q09666 AHNAK Q09666.S1298.p_AHNAK Q09666_S1298s _1_1_1298_1298 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24889.24889.3 15.74 15.74 99 1 1 1 0 736.3838 2127.1585 S1298s TMT10 1290 (K) VDVEVPDVsLEGPEGK (L) VDVEVPDVS(1.0)LEGPEGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 55 1.1 4313.36 HUMAN 1 -4.4419 4.7542 DVEVVGGSDGEGAIG-p Q8NHZ8;S42-p DVEVVGGSDGEGAIG 0.417861668686393 0.4327885548442 0.112333333333333 0.0756666666666667 6.99357137217425 4.84605023972798 0.112333333333333 0.0756666666666667 0.199821798156585 0.327638535499964 1.45988786821823 1.07555728133916 Q8NHZ8 CDC26 Q8NHZ8.S42.p_CDC26 Q8NHZ8_S42s _1_1_42_42 Q8NHZ8 Q8NHZ8 Anaphase-promoting complex subunit CDC26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15081.15081.5 27.43 22.5 10.293 3 1 1 0 771.8271 3775.1462 S42s TMT10 30 (R) KKQKEDVEVVGGsDGEGAIGLSSDPK (S) KKQKEDVEVVGGS(0.99)DGEGAIGLS(0.0)S(0.0)DPK K:TMT10,s:Phosphorylated S CDC26 9776.8 11 1 2141.1 95.99 HUMAN 1 6.9936 4.8461 DVFARPASPSLQLLP-p Q8WUF5;S280-p DVFARPASPSLQLLP 0.495901315517715 0.300885194800137 -0.166666666666667 0.114 5.61042757646653 6.88604674962652 -0.166666666666667 0.114 0.274762362766742 0.204830830102819 -1.2148396027545 1.44065964041553 Q8WUF5 PPP1R13L Q8WUF5.S280.p_PPP1R13L Q8WUF5_S280s _1_1_280_280 Q8WUF5 Q8WUF5 RelA-associated inhibitor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.34084.34084.3 14.09 14.09 2.055 2 1 1 0 792.4342 2295.3175 S280s TMT10 272 (R) LDVFARPAsPSLQLLPWR (E) LDVFARPAS(0.99)PS(0.0)LQLLPWR s:Phosphorylated S PPP1R13L 89431.8 10 11 371.1 339.39 HUMAN 1 -5.6104 6.886 DVFASEVTPSDLQKQ-p Q8WYP5-2;T1404-p DVFASEVTPSDLQKQ 0.208094276358716 0.198008576778493 -0.292666666666667 -0.139333333333333 13.1518910110678 9.25353277670979 -0.292666666666667 -0.139333333333333 0.0483961594469919 0.118753583115502 -2.53847323770724 -1.85157318314415 Q8WYP5 AHCTF1 Q8WYP5.2.T1404.p_AHCTF1 Q8WYP5-2_T1404t _1_1_1404_1404 Q8WYP5-2 Q8WYP5-2 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21133.21133.5 19.57 19.57 2.565 11 1 1 0 925.8801 4545.3865 T1404t TMT10 1377 (K) SSSTALTTNVTEQTEKDGDKDVFASEVtPSDLQK (Q) S(0.0)S(0.0)S(0.0)T(0.0)ALT(0.0)T(0.0)NVT(0.0)EQT(0.0)EKDGDKDVFAS(0.0)EVT(0.99)PS(0.0)DLQK K:TMT10,t:Phosphorylated T AHCTF1 258049.6 7 21 40.1 829.79 HUMAN 1 -13.1519 -9.2535 DVFKAPLTPRASQVE-p O14686-3;T2335-p DVFKAPLTPRASQVE 0.922345826324192 0.0936620009394382 0.0143333333333333 -0.194 0.688851803347406 13.6018696329008 0.0143333333333333 -0.194 0.853325688191822 0.0436327953105028 0.193899504894967 -2.61859027096475 O14686 KMT2D O14686.3.T2335.p_KMT2D O14686-3_T2335t _1_1_2335_2335 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18922.18922.3 12.7 7 7.853 2 1 1 0 627.3537 1800.0784 T2335t TMT10 2326 (K) TPDVFKAPLtPR (A) T(0.0)PDVFKAPLT(0.99)PR K:TMT10,t:Phosphorylated T KMT2D 600227.3 1 29 17.1 1042.08 HUMAN 1 0.6889 -13.6019 DVFVELLSPRRKRRG-p Q9NRL2;S1353-p DVFVELLSPRRKRRG 0.299175407359011 0.0240488908252975 0.255666666666667 -0.372333333333333 9.85472097510327 22.066793207095 0.255666666666667 -0.372333333333333 0.103401753225863 0.00621327647854193 1.95648123783768 -4.33262038389396 Q9NRL2 BAZ1A Q9NRL2.S1353.p_BAZ1A Q9NRL2_S1353s _1_1_1353_1353 Q9NRL2 Q9NRL2|Q9NRL2-2 Bromodomain adjacent to zinc finger domain protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24733.24733.3 18.45 18.45 18.447 2 1 1 0 771.0669 2231.2134 S1353s TMT10 1338 (R) HSHGPLQADVFVELLsPR (R) HS(0.0)HGPLQADVFVELLS(0.99)PR s:Phosphorylated S BAZ1A 180353.8 3 7 567.1 270.71 HUMAN 1 9.8547 -22.0668 DVGLTRASPAARNPV-p Q8WVB6-2;S188-p DVGLTRASPAARNPV 0.105068796644449 0.509444253575256 0.357333333333333 -0.101 20.5959100304797 3.92685998718201 0.357333333333333 -0.101 0.00871784206512283 0.404868511774088 4.00802231888267 -0.902971878158114 Q8WVB6 CHTF18 Q8WVB6.2.S188.p_CHTF18 Q8WVB6-2_S188s _1_1_188_188 Q8WVB6-2 A0A0D9SF58|Q8WVB6-2|E7EXA6|F8WCC1 Isoform 2 of Chromosome transmission fidelity protein 18 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7380.7380.3 10.85 5.91 99 1 1 1 0 487.6026 1380.8273 S188s TMT10 187 (R) AsPAARNPVLR (R) AS(1.0)PAARNPVLR s:Phosphorylated S CHTF18 110890.8 2 3 1974.1 104.64 HUMAN 1 20.5959 -3.9269 DVHIIARSDDELLDD-p Q7Z6Z7;S2619-p DVHIIARSDDELLDD 0.381956633074338 0.0420563517016539 0.19 0.272666666666667 7.73101409509006 18.4420389335578 0.19 0.272666666666667 0.168615925444642 0.0143151567093024 1.58846114323033 3.54928836289041 Q7Z6Z7 HUWE1 Q7Z6Z7.S2619.p_HUWE1 Q7Z6Z7_S2619s _1_1_2619_2619 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34344.34344.4 20.49 20.49 2.865 10 1 1 0 1291.8864 5084.565 S2619s TMT10 2606 (R) LLVGNDDVHIIARsDDELLDDFFHDQSTATSQAGTLSSIPTALTR (W) LLVGNDDVHIIARS(0.99)DDELLDDFFHDQS(0.0)T(0.0)AT(0.0)S(0.0)QAGT(0.0)LS(0.0)S(0.0)IPT(0.0)ALT(0.0)R s:Phosphorylated S HUWE1 485818.9 13 35 11.1 1210.45 HUMAN 1 7.731 18.442 DVHSPPKSPEGKTSA-p O95684;S160-p DVHSPPKSPEGKTSA 0.177747113056671 0.00712966319785279 -0.358 -0.610666666666667 14.8704144686613 30.7557343394145 -0.358 -0.610666666666667 0.0325805606281057 0.000840284913076662 -2.85418244798126 -6.65449447682703 O95684 FGFR1OP O95684.S160.p_FGFR1OP O95684_S160s _1_1_160_160 O95684 O95684|O95684-2 FGFR1 oncogene partner HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14493.14493.5 20.33 20.86 2.165 5 1 1 0 726.7905 3549.957 S160s TMT10 139 (K) EKGPTTGEGALDLSDVHSPPKsPEGK (T) EKGPT(0.0)T(0.0)GEGALDLS(0.0)DVHS(0.0)PPKS(0.99)PEGK K:TMT10,s:Phosphorylated S FGFR1OP 43178.2 2 3 1485.1 137.99 HUMAN 1 -14.8704 -30.7557 DVIAPLITPQKKEWN-p Q9Y3Z3;T592-p DVIAPLITPQKKEWN 0.383105758171724 0.0010340752520887 -0.145 -1.185 7.71361843802562 51.3123329494212 -0.145 -1.185 0.169292670653564 7.39208079512306e-06 -1.58543816408399 -16.6081979403999 Q9Y3Z3 SAMHD1 Q9Y3Z3.T592.p_SAMHD1 Q9Y3Z3_T592t _1_1_592_592 Q9Y3Z3 Q9Y3Z3|Q9Y3Z3-4|Q9Y3Z3-3 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25456.25456.4 23.29 19.39 14.294 3 1 1 0 1140.8586 4480.4621 T592t TMT10 567 (R) QYFVQWCADRNFTKPQDGDVIAPLItPQKK (E) QY(0.0)FVQWCADRNFT(0.0)KPQDGDVIAPLIT(0.99)PQKK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T SAMHD1 72940.9 10 5 1871.1 109.9 HUMAN 1 -7.7136 -51.3123 DVIGGRDTPGAKVAL-p Q68DQ2;T2902-p DVIGGRDTPGAKVAL 0.862029975440239 0.329123711836124 -0.0376666666666667 0.096 1.26009037098149 6.38972967327258 -0.0376666666666667 0.096 0.748153932247813 0.229629157640044 -0.337904435028521 1.3533643780968 Q68DQ2 CRYBG3 Q68DQ2.T2902.p_CRYBG3 Q68DQ2_T2902t _1_1_2902_2902 Q68DQ2 Q68DQ2|Q68DQ2-1|Q68DQ2-2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15111.15111.3 12.17 5.07 4.011 3 1 1 0 791.0628 2291.2066 T2902t TMT10 2889 (K) ASDTCLDVIGGRDtPGAK (V) AS(0.0)DT(0.0)CLDVIGGRDT(0.99)PGAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CRYBG3 333308.2 2 16 582.1 265.87 HUMAN 1 -1.2601 6.3897 DVKADGDSKGSEEVD-p Q9Y4W2;S246-p DVKADGDSKGSEEVD 0.461535694452753 0.00430710892012816 -0.221666666666667 0.777 6.19119066529368 34.7703689866004 -0.221666666666667 0.777 0.240370370829338 0.000333398085290207 -1.31855199990314 8.01005964456495 Q9Y4W2 LAS1L Q9Y4W2.S246.p_LAS1L Q9Y4W2_S246sS249s_2_2_246_249 Q9Y4W2 Q9Y4W2|Q9Y4W2-2|Q9Y4W2-3|Q9Y4W2-4 Ribosomal biogenesis protein LAS1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8299.8299.5 9.12 9.12 2.411 6 2 2 0 780.9867 3740.9622 S246s S249s TMT10 235 (K) STESDVKADGDsKGsEEVDSHCKK (A) S(0.0)T(0.0)ES(0.0)DVKADGDS(0.99)KGS(0.99)EEVDS(0.0)HCKK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S LAS1L 84033.3 1 7 1725.1 119.4 HUMAN 1 -6.1912 34.7704 DVKDKEISPLVAITP-p Q9Y450-2;S602-p DVKDKEISPLVAITP 0.0752440132125947 0.0168119752343378 -0.373333333333333 -0.418333333333333 24.0325860940147 24.4882599858075 -0.373333333333333 -0.418333333333333 0.00395131261128057 0.00355773831897322 -4.80285990925665 -4.9093608378234 Q9Y450 HBS1L Q9Y450.2.S602.p_HBS1L Q9Y450-2_S602s _1_1_602_602 Q9Y450-2 Q9Y450-2 Isoform 2 of HBS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32293.32293.3 12.22 12.22 5.341 2 1 1 0 863.1535 2507.4728 S602s TMT10 598 (K) DKEIsPLVAITPFDFK (S) DKEIS(0.99)PLVAIT(0.0)PFDFK K:TMT10,s:Phosphorylated S HBS1L 70811.6 2 10 2070.1 99.42 HUMAN 1 -24.0326 -24.4883 DVKLLSISGKRSAPG-p P06748;S139-p DVKLLSISGKRSAPG 0.18709748510332 0.0110512162888973 -0.376333333333333 -0.566333333333333 14.304332513982 27.4024462937187 -0.376333333333333 -0.566333333333334 0.0371164771032174 0.00181867614623755 -2.74896765548018 -5.67114404799492 P06748 NPM1 P06748.S139.p_NPM1 P06748_S139s _1_1_139_139 P06748 P06748|P06748-2|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16537.16537.2 8.62 8.62 1.167 2 1 1 0 706.4257 1331.8775 S139s TMT10 135 (K) LLSIsGKR (S) LLS(0.0)IS(0.99)GKR K:TMT10,s:Phosphorylated S NPM1 32745.6 4 9 78.1 640.75 HUMAN 1 -14.3043 -27.4024 DVKLPDMSVKTPKIS-p Q09666;S691-p DVKLPDMSVKTPKIS 0.520590782283107 0.0616669239747438 -0.176666666666667 0.315333333333333 5.23911116655349 16.1086724606443 -0.176666666666667 0.315333333333333 0.299287710054236 0.0244981197915028 -1.1477014609432 3.08688486131463 Q09666 AHNAK Q09666.S691.p_AHNAK Q09666_S691s _1_1_691_691 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21015.21015.4 11.55 11.55 99 1 1 1 0 631.6257 2443.5128 S691s TMT10 680 (K) LKGPDVKLPDMsVK (T) LKGPDVKLPDMS(1.0)VK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 35 1.1 4313.36 HUMAN 1 -5.2391 16.1087 DVKQLGGSVELVDIG-p Q96KP4;S58-p DVKQLGGSVELVDIG 0.341259582541057 0.111612044995321 0.176 0.17 8.67883630120426 12.5707640726752 0.176 0.17 0.135555258610891 0.0553252764550862 1.75276874011072 2.4327185041424 Q96KP4 CNDP2 Q96KP4.S58.p_CNDP2 Q96KP4_S58s _1_1_58_58 Q96KP4 Q96KP4|Q96KP4-2|A0A087WYZ1 Cytosolic non-specific dipeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24676.24676.2 16.45 13.19 99 1 1 1 0 927.0131 1773.0522 S58s TMT10 54 (K) QLGGsVELVDIGK (Q) QLGGS(1.0)VELVDIGK K:TMT10,s:Phosphorylated S CNDP2 53219.8 3 1 3897.1 41.11 HUMAN 1 8.6788 12.5708 DVKRRVKSPGGPGSH-p O75382;S437-p DVKRRVKSPGGPGSH 0.640615783875993 0.632379182346825 0.098 -0.0456666666666666 3.61199096742748 2.70535420941014 0.098 -0.0469339619029627 0.43531226460276 0.536370123453427 0.842194511055815 -0.659816050291917 O75382 TRIM3 O75382.S437.p_TRIM3 O75382_S437s _1_1_437_437 O75382 O75382|O75382-2|A0A1W2PPI7|O75382-3|O75382-4 Tripartite motif-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5352.5352.4 17.44 17.44 6.29 2 1 1 0 429.7394 1635.9695 S437s TMT10 435 (R) VKsPGGPGSHVR (Q) VKS(0.99)PGGPGS(0.0)HVR K:TMT10,s:Phosphorylated S TRIM3 81912.1 7 3 1265.1 160.44 HUMAN 1 3.612 -2.7054 DVLDKASSLIEEAKK-p Q9Y490;S1164-p DVLDKASSLIEEAKK 0.0879384467271527 0.0142372187802329 -0.501666666666667 0.395333333333333 22.5030337563763 25.6079557110633 -0.501666666666667 0.395333333333333 0.00561948639828966 0.00274918793236419 -4.43791803446843 5.19273205217621 Q9Y490 TLN1 Q9Y490.S1164.p_TLN1 Q9Y490_S1164s _1_1_1164_1164 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17695.17695.2 10.71 10.71 1.122 2 1 1 0 743.4031 1405.8303 S1164s TMT10 1162 (K) ASsLIEEAK (K) AS(0.0)S(0.99)LIEEAK K:TMT10,s:Phosphorylated S TLN1 271930.4 2 15 267.1 395.2 HUMAN 1 -22.503 25.608 DVLEGEVTDEDEEAE-p Q15111;T556-p DVLEGEVTDEDEEAE 0.58734821631503 0.00840254345381164 0.0716666666666667 0.495666666666667 4.25418230564161 29.4968462474495 0.0716666666666667 0.495666666666667 0.375475642778288 0.00112283353573554 0.965415528639572 6.27076594610202 Q15111 PLCL1 Q15111.T556.p_PLCL1 Q15111_T556t _1_1_556_556 Q15111 Q15111|A0A0A0MT40|Q15111-2 Inactive phospholipase C-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20123.20123.3 24.28 21.24 7.337 3 1 1 0 1076.839 3148.5244 T556t TMT10 543 (K) KLPSDPDVLEGEVtDEDEEAEMSR (R) KLPS(0.0)DPDVLEGEVT(0.99)DEDEEAEMS(0.0)R K:TMT10,t:Phosphorylated T PLCL1 124437.7 2 3 2866.1 67.84 HUMAN 1 4.2542 29.4968 DVLFYDESPPPRPKL-p Q7L590;S644-p DVLFYDESPPPRPKL 0.409757153402721 0.00153570152759703 -0.117333333333333 -0.894 7.14263510555133 45.3641748448592 -0.117333333333333 -0.894 0.193079644021822 2.90792040890861e-05 -1.48595836527183 -12.8287858586935 Q7L590 MCM10 Q7L590.S644.p_MCM10 Q7L590_S644s _1_1_644_644 Q7L590 Q7L590|Q7L590-2|Q5T670 Protein MCM10 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23890.23890.3 21.39 16.17 4.355 2 1 1 0 923.4706 2688.4285 S644s TMT10 631 (R) GVLEGDDVLFYDEsPPPRPK (L) GVLEGDDVLFY(0.0)DES(0.99)PPPRPK K:TMT10,s:Phosphorylated S MCM10 99322.4 2 8 1720.1 119.54 HUMAN 1 -7.1426 -45.3642 DVLHRTYSAPAINAI-p Q9H4L5;S251-p DVLHRTYSAPAINAI 0.592062917051146 0.72264948763431 -0.127 0.0446666666666667 4.19387816901265 1.94244738132883 -0.127 0.0446666666666667 0.380725690584079 0.639374427030065 -0.954012869862085 0.495961559465223 Q9H4L5 OSBPL3 Q9H4L5.S251.p_OSBPL3 Q9H4L5_S251s _1_1_251_251 Q9H4L5 Q9H4L5|Q9H4L5-3|Q9H4L5-5|Q9H4L5-7 Oxysterol-binding protein-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19222.19222.3 21.12 21.12 1.843 5 1 1 0 868.7866 2524.3812 S251s Hydrogen 249 (R) TYsAPAINAIQGGSFESPKK (E) T(0.0)Y(0.0)S(0.99)APAINAIQGGS(0.0)FES(0.0)PKK K:TMT10-Lys-Only,s:Phosphorylated S OSBPL3 102191.7 3 1 683.2 244.57 HUMAN 1 -4.1939 1.9424 DVMAKTESPRTSGVL-p O14733-2;S446-p DVMAKTESPRTSGVL 0.991908040895934 0.107345719291196 -0.00166666666666667 -0.438 0.0739498002472975 12.8006138558827 -0.00166666666666667 -0.438 0.983116578982201 0.0524733286297863 -0.0221573144037365 -2.47386742465315 O14733 MAP2K7 O14733.2.S446.p_MAP2K7 O14733-2_S446s _1_1_446_446 O14733-2 O14733-2|O14733-3|O14733-4 Isoform 2 of Dual specificity mitogen-activated protein kinase kinase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8829.8829.2 9.99 4.86 2.134 2 1 1 0 836.4291 1591.8878 S446s TMT10 439 (K) DVMAKTEsPR (T) DVMAKT(0.0)ES(0.99)PR K:TMT10,s:Phosphorylated S MAP2K7 52336.2 5 3 2820.1 69.41 HUMAN 1 -0.0739 -12.8006 DVMKKGKSTGSLLTP-p Q5T5U3;S1741-p DVMKKGKSTGSLLTP 0.814399806622497 0.3510157196162 0.049 -0.125666666666667 1.71055099201586 6.02641657230206 0.049 -0.125666666666667 0.674442455350613 0.249665390318385 0.443702569954787 -1.28896023249413 Q5T5U3 ARHGAP21 Q5T5U3.S1741.p_ARHGAP21 Q5T5U3_S1741s _1_1_1741_1741 Q5T5U3 Q5T5U3|A0A087WW76 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15255.15255.5 10.57 10.57 1.102 7 1 1 0 703.5876 3433.9461 S1741s TMT10 1739 (K) GKsTGSLLTPTRGESEKQEPTWK (T) GKS(0.99)T(0.0)GS(0.0)LLT(0.0)PT(0.0)RGES(0.0)EKQEPT(0.0)WK K:TMT10,s:Phosphorylated S ARHGAP21 218696.3 1 25 148.1 512.52 HUMAN 1 1.7106 -6.0264 DVMVLVDSEEEEEEE-p Q8N0Z9-2;S462-p DVMVLVDSEEEEEEE 0.301388028326366 0.247174573674531 -0.166666666666667 0.135333333333333 9.77433032026443 7.99788374593291 -0.166666666666667 0.135333333333333 0.10533360984626 0.158566567613837 -1.94252925626095 1.63427563611629 Q8N0Z9 VSIG10 Q8N0Z9.2.S462.p_VSIG10 Q8N0Z9-2_S462s _1_1_462_462 Q8N0Z9-2 Q8N0Z9-2 Isoform 2 of V-set and immunoglobulin domain-containing protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26693.26693.4 17.32 17.32 99 1 1 1 0 1027.1743 4025.7073 S462s TMT10 450 (R) GQNMDDVMVLVDsEEEEEEEEEEDAAVGEQEGAR (E) GQNMDDVMVLVDS(1.0)EEEEEEEEEEDAAVGEQEGAR s:Phosphorylated S VSIG10 59756.3 2 1 3357.1 52.99 HUMAN 1 -9.7743 7.9979 DVNAAIATIKTKRSI-p P68363;T334-p DVNAAIATIKTKRSI 0.69800270912846 0.064041298675641 0.0546666666666667 0.315333333333333 2.93497870568708 15.8877539582976 0.0546666666666667 0.315333333333333 0.508747314126752 0.0257765389816456 0.707174514391221 3.04453483319004 P68363 TUBA1B P68363.T334.p_TUBA1B P68363_T334t _1_1_334_334 P68363 F5H5D3|Q71U36|P68363|Q13748|Q6PEY2|Q9BQE3|Q13748-2 Tubulin alpha-1B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17107.17107.2 12.48 8.57 99 1 1 1 0 777.4395 1473.9041 T334t TMT10 327 (K) DVNAAIAtIK (T) DVNAAIAT(1.0)IK K:TMT10,t:Phosphorylated T TUBA1B 50835.4 2 12 868.1 210.03 HUMAN 1 2.935 15.8878 DVNTCYGSPQSPQLI-p Q9BTX1;S471-p DVNTCYGSPQSPQLI 0.957246455101486 0.524515219356109 0.00899999999999999 -0.083 0.370579693969204 3.76614556882858 0.009 -0.083 0.91821002611655 0.420131691994966 0.107573550919377 -0.872014124212094 Q9BTX1 NDC1 Q9BTX1.S471.p_NDC1 Q9BTX1_S471sS474s_2_2_471_474 Q9BTX1 Q9BTX1|Q9BTX1-2|Q9BTX1-5|Q9BTX1-6|Q9BTX1-4 Nucleoporin NDC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28470.28470.3 15.8 15.8 1.504 4 2 2 0 920.4153 2583.2897 M459m S471s S474s TMT10 459 (R) mAGIFDVNTCYGsPQsPQLIR (R) M(1.0)AGIFDVNT(0.0)CY(0.0)GS(0.99)PQS(0.99)PQLIR C:Carbamidomethylation,m:Oxidized methionine,s:Phosphorylated S NDC1 76988 4 16 1059.1 182.55 HUMAN 1 0.3706 -3.7661 DVPASLPTPPHNNQE-p Q8NEZ4-3;T4034-p DVPASLPTPPHNNQE 0.252651211577592 0.431543938269656 0.225 -0.112 11.3925785684937 4.86284050205951 0.225 -0.112 0.0725674969176831 0.326374297314681 2.22503437699771 -1.07864897516052 Q8NEZ4 KMT2C Q8NEZ4.3.T4034.p_KMT2C Q8NEZ4-3_T4034t _1_1_4034_4034 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17955.18165.3 21.73 21.73 2.729 3 1 1 0 841.753 2443.2779 T4034t TMT10 4025 (K) TVDVPASLPtPPHNNQEELR (I) T(0.0)VDVPAS(0.0)LPT(0.99)PPHNNQEELR t:Phosphorylated T KMT2C 554869.1 2 21 88.1 626.31 HUMAN 1 11.3926 -4.8628 DVPEIVISGNGQPRR-p O43318;S430-p DVPEIVISGNGQPRR 0.0904989301263926 0.248663775026853 0.372666666666667 0.131 22.1916980528515 7.96250914148115 0.372666666666667 0.131 0.00603712536984406 0.159863414899281 4.36590394601731 1.62814274347095 O43318 MAP3K7 O43318.S430.p_MAP3K7 O43318_S430s_1_1_430_430 O43318 O43318|O43318-3 Mitogen-activated protein kinase kinase kinase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34263.34263.3 21.63 21.63 13.347 3 1 1 0 865.4385 2513.3561 S430s N432n TMT10 415 (K) TASFGNILDVPEIVIsGnGQPR (R) T(0.0)AS(0.0)FGN(0.0)ILDVPEIVIS(0.99)GN(0.99)GQPR s:Phosphorylated S,n:Deamidated MAP3K7 67936.6 1 7 1139.1 173.29 HUMAN 1 22.1917 7.9625 DVPSRVVSVPNLASY-p Q9ULE4;S976-p DVPSRVVSVPNLASY 0.543504741067789 0.14937118430965 -0.0976666666666667 0.154333333333333 4.88795210469868 10.8681204082418 -0.0976666666666667 0.154333333333333 0.324492594242703 0.0818819089808307 -1.08348417917724 2.1320728519874 Q9ULE4 FAM184B Q9ULE4.S976.p_FAM184B Q9ULE4_S976s _1_1_976_976 Q9ULE4 Q9ULE4 Protein FAM184B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21536.21536.4 14.64 11.83 1.145 4 1 1 0 732.166 2845.6754 S976s TMT10 966 (K) KVEDVPSRVVsVPNLASYAK (N) KVEDVPS(0.0)RVVS(0.99)VPNLAS(0.0)Y(0.0)AK K:TMT10,s:Phosphorylated S FAM184B 121954.4 6 2 2584.1 77.53 HUMAN 1 -4.888 10.8681 DVQTIQKSPVVSKPP-p P82094-2;S112-p DVQTIQKSPVVSKPP 0.494855442199795 0.00501676282103528 0.147333333333333 -0.650333333333333 5.6268855976819 33.527488679827 0.147333333333333 -0.650333333333333 0.273723093923181 0.000443865236069791 1.21779911266015 -7.56754016918273 P82094 TMF1 P82094.2.S112.p_TMF1 P82094-2_S112s _1_1_112_112 P82094-2 P82094-2|F8WF45 Isoform 2 of TATA element modulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11039.11039.3 8.9 5.28 3.366 2 1 1 0 593.0255 1697.0929 S112s TMT10 112 (K) sPVVSKPPAK (S) S(0.99)PVVS(0.0)KPPAK K:TMT10,s:Phosphorylated S TMF1 123666.4 4 4 393.1 331.84 HUMAN 1 5.6269 -33.5275 DVRAEQPSPPNSDSG-p Q9BUA3;S148-p DVRAEQPSPPNSDSG 0.891835055134898 0.0201260179536942 0.03 0.317333333333333 0.972395155454734 23.2446844085443 0.03 0.317333333333333 0.799393264092079 0.00473730731807793 0.266939636720274 4.60727876600968 Q9BUA3 C11orf84 Q9BUA3.S148.p_C11orf84 Q9BUA3_S148s _1_1_148_148 Q9BUA3 Q9BUA3 SPIN1-docking protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.36391.36391.4 14.14 14.14 1.201 5 1 1 0 1262.3374 4966.3677 S148s TMT10 126 (K) SNILEAWSEGVALLQDVRAEQPsPPNSDSGQDAHPDPDANPDAAR (M) S(0.0)NILEAWS(0.0)EGVALLQDVRAEQPS(0.99)PPNS(0.0)DS(0.0)GQDAHPDPDANPDAAR s:Phosphorylated S C11orf84 41321.3 1 6 884.1 206.69 HUMAN 1 0.9724 23.2447 DVREKRKSLFINHHP-p Q8ND76;S83-p DVREKRKSLFINHHP 0.884599008832674 0.475392129521584 0.0303333333333333 -0.116 1.0519515999329 4.30659276221137 0.0303333333333334 -0.116 0.784882850588345 0.370971651781564 0.286859647571362 -0.975125309408182 Q8ND76 CCNY Q8ND76.S83.p_CCNY Q8ND76_S83s _1_1_83_83 Q8ND76 Q8ND76|Q8ND76-2|Q8ND76-3 Cyclin-Y HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13511.13511.3 16.83 13.59 99 1 1 1 0 632.6664 1816.018 S83s TMT10 83 (K) sLFINHHPPGQIAR (K) S(1.0)LFINHHPPGQIAR s:Phosphorylated S CCNY 39849.4 3 9 1234.1 163.69 HUMAN 1 1.052 -4.3066 DVREKRKSNHLNHVS-p Q8N7R7;S105-p DVREKRKSNHLNHVS 0.340030051241749 0.247950920628884 0.155333333333333 0.126333333333333 8.71731908477246 7.97891476358791 0.155333333333333 0.126333333333333 0.134359411059905 0.159260664571401 1.7594304154898 1.63098713520487 Q8N7R7 CCNYL1 Q8N7R7.S105.p_CCNYL1 Q8N7R7_S105s _1_1_105_105 Q8N7R7 Q8N7R7|Q8N7R7-3 Cyclin-Y-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6945.6945.5 13.66 13.66 5.325 3 1 1 0 517.4956 2503.4824 S105s TMT10 103 (K) RKsNHLNHVSPGQLTK (K) RKS(0.99)NHLNHVS(0.0)PGQLT(0.0)K K:TMT10,s:Phosphorylated S CCNYL1 41274.9 1 1 1234.2 163.69 HUMAN 1 8.7173 7.9789 DVRILRGSQRARRKR-p Q96JM7;S206-p DVRILRGSQRARRKR 0.578040886243326 0.0770565683209836 0.092 -0.218333333333333 4.37958448260227 14.7685103284954 0.092 -0.218333333333333 0.364788846945714 0.0333540800820675 0.989027032699125 -2.83333282693383 Q96JM7 L3MBTL3 Q96JM7.S206.p_L3MBTL3 Q96JM7_S206s _1_1_206_206 Q96JM7 Q96JM7|Q96JM7-2 Lethal(3)malignant brain tumor-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.5744.5744.3 8.85 8.85 99 1 1 1 0 380.2143 1058.6632 S206s TMT10 202 (R) ILRGsQR (A) ILRGS(1.0)QR s:Phosphorylated S L3MBTL3 89704.4 1 2 1586.1 129.42 HUMAN 1 4.3796 -14.7685 DVRPLPASPARPCPS-p Q9BQ89;S162-p DVRPLPASPARPCPS 0.268450873038571 0.874318487767512 0.16 -0.0203333333333333 10.8286947593618 0.820938261541643 0.16 -0.0203333333333333 0.0826286246615476 0.827763312169084 2.12612438396744 -0.228317232316545 Q9BQ89 FAM110A Q9BQ89.S162.p_FAM110A Q9BQ89_S162s _1_1_162_162 Q9BQ89 Q9BQ89 Protein FAM110A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11814.11814.5 11.36 8.81 2.302 4 1 1 0 759.8044 3715.0288 S162s TMT10 153 (R) RVDVRPLPAsPARPCPSPGPAAASSPARPPGLQR (S) RVDVRPLPAS(0.99)PARPCPS(0.0)PGPAAAS(0.0)S(0.0)PARPPGLQR C:Carbamidomethylation,s:Phosphorylated S FAM110A 31612.3 5 2 2320.1 87.91 HUMAN 1 10.8287 -0.8209 DVRPQPPSPREGPLP-p P04626;S1151-p DVRPQPPSPREGPLP 0.965110779182277 0.666014956570252 0.00799999999999999 0.0506666666666667 0.297049871911019 2.41556894676307 0.00799999999999999 0.0506666666666667 0.933888468435237 0.573380745976314 0.0868837397904849 0.598910275283265 P04626 ERBB2 P04626.S1151.p_ERBB2 P04626_S1151s _1_1_1151_1151 P04626 P04626|P04626-4|P04626-5|B4DTR1|P04626-2|P04626-3 Receptor tyrosine-protein kinase erbB-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25043.25043.5 24.38 22.22 3.559 10 1 1 0 998.6768 4909.3828 S1151s TMT10 1112 (R) YSEDPTVPLPSETDGYVAPLTCSPQPEYVNQPDVRPQPPsPR (E) Y(0.0)S(0.0)EDPT(0.0)VPLPS(0.0)ET(0.0)DGY(0.0)VAPLT(0.0)CS(0.0)PQPEY(0.0)VNQPDVRPQPPS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S ERBB2 141274.2 5 21 521.1 283.33 HUMAN 1 0.297 2.4156 DVRSLIGSPGRTFPP-p Q9Y618;S1487-p DVRSLIGSPGRTFPP 0.562804574644519 0.997566213620728 -0.084 0.000333333333333334 4.598772379499 0.0147691727617462 -0.084 0.00033333333333333 0.346834876434976 0.996605048221448 -1.02998954654903 0.00445461604992072 Q9Y618 NCOR2 Q9Y618.S1487.p_NCOR2 Q9Y618_S1487s _1_1_1487_1487 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25877.25877.3 13.58 8.06 1.605 3 1 1 0 914.8056 2662.4337 S1487s TMT10 1483 (R) SLIGsPGRTFPPVHPLDVMADAR (A) S(0.0)LIGS(0.99)PGRT(0.0)FPPVHPLDVMADAR s:Phosphorylated S NCOR2 275540.8 8 23 16.1 1053.89 HUMAN 1 -4.5988 0.0148 DVSEDPATPKDSNSL-p Q8NFH8-4;T445-p DVSEDPATPKDSNSL 0.911605742223265 0.505609534457909 0.0176666666666667 -0.0646666666666667 0.787514987278109 3.96911489311231 0.0166214747192059 -0.0646666666666667 0.834158349598724 0.400948423950038 0.219695294305584 -0.911067840680969 Q8NFH8 REPS2 Q8NFH8.4.T445.p_REPS2 Q8NFH8-4_T445t _1_1_445_445 Q8NFH8-4 Q8NFH8|Q8NFH8-4|Q8NFH8-2|Q8NFH8-3 Isoform 4 of RalBP1-associated Eps domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11670.11670.3 14.62 13.22 3.045 4 1 1 0 824.0928 2390.3018 T445t TMT10 438 (K) DVSEDPAtPKDSNSLK (A) DVS(0.0)EDPAT(0.99)PKDS(0.0)NS(0.0)LK K:TMT10,t:Phosphorylated T REPS2 71917.6 2 8 226.3 425.21 HUMAN 1 0.7875 -3.9691 DVSPDRGSPPSRVPQ-p Q9NYZ3;S580-p DVSPDRGSPPSRVPQ 0.423616239367778 0.00901683866038459 0.144666666666667 -0.502333333333333 6.87454112591814 28.9470949633999 0.144666666666667 -0.502333333333334 0.205374201268059 0.00127435522416617 1.43903393371481 -6.10882399787666 Q9NYZ3 GTSE1 Q9NYZ3.S580.p_GTSE1 Q9NYZ3_S580s _1_1_580_580 Q9NYZ3 Q9NYZ3 G2 and S phase-expressed protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23430.23430.4 21.56 14.35 1.362 8 1 1 0 996.7493 3904.0129 S580s TMT10 571 (R) LVDVSPDRGsPPSRVPQALNFSPEESDSTFSK (S) LVDVS(0.0)PDRGS(0.99)PPS(0.0)RVPQALNFS(0.0)PEES(0.0)DS(0.0)T(0.0)FS(0.0)K K:TMT10,s:Phosphorylated S GTSE1 77156.9 2 14 271.1 394.28 HUMAN 1 6.8745 -28.9471 DVSPYSLSPVSNKSQ-p Q9UM11-2;S151-p DVSPYSLSPVSNKSQ 0.936481555208558 0.0075799697481076 -0.023 -0.489 0.554625604516038 30.2904352736253 -0.023 -0.489 0.88011098080093 0.000935311927385203 -0.158099457614205 -6.51052678340027 Q9UM11 FZR1 Q9UM11.2.S151.p_FZR1 Q9UM11-2_S151s _1_1_151_151 Q9UM11-2 Q9UM11|Q9UM11-2|K7EQT1 Isoform 2 of Fizzy-related protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14529.14529.3 25 25 1.12 7 1 1 0 920.4498 2679.3626 S151s TMT10 136 (K) RSSPDDGNDVSPYSLsPVSNK (S) RS(0.0)S(0.0)PDDGNDVS(0.0)PY(0.0)S(0.0)LS(0.99)PVS(0.0)NK K:TMT10,s:Phosphorylated S FZR1 55164.2 1 6 2691.1 73.84 HUMAN 1 -0.5546 -30.2904 DVSSKQLSPESLGTL-p E9PGC8;S1456-p DVSSKQLSPESLGTL 0.126572282263763 0.00523080079250302 -0.578666666666667 0.648 18.6313898460467 33.1836518339006 -0.578666666666667 0.648 0.0137044312145672 0.000480435197014198 -3.59119276513406 7.44887656730705 E9PGC8 NotFound E9PGC8.S1456.p_NotFound E9PGC8_S1456s _1_1_1456_1456 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.33077.33077.3 19.45 19.45 1.658 3 1 1 0 857.1297 2489.4016 S1456s TMT10 1454 (K) QLsPESLGTLQFGELNLGK (E) QLS(0.99)PES(0.0)LGT(0.0)LQFGELNLGK K:TMT10,s:Phosphorylated S MAP1A 332906.7 6 25 20.1 1016.98 HUMAN 1 -18.6314 33.1837 DVTAPDVSIEEPEGK-p Q09666;S793-p DVTAPDVSIEEPEGK 0.909190676386736 0.700481034179357 -0.0183333333333333 -0.0796666666666666 0.811161143166744 2.12644626034853 -0.0183333333333333 -0.0796666666666667 0.829628925702594 0.612851670129953 -0.225815501724325 -0.536562111302397 Q09666 AHNAK Q09666.S793.p_AHNAK Q09666_S793s _1_1_793_793 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23143.23143.3 16.92 16.91 5.41 2 1 1 0 746.3841 2157.1691 S793s TMT10 785 (K) IDVTAPDVsIEEPEGK (L) IDVT(0.0)APDVS(0.99)IEEPEGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 37 1.1 4313.36 HUMAN 1 -0.8112 -2.1264 DVTEELMSDEEDSLN-p Q9H972;S428-p DVTEELMSDEEDSLN 0.148266672319898 0.512447005471775 0.394333333333333 0.122 16.7592518682735 3.89500891876085 0.394333333333333 0.122 0.0210899142130043 0.407848724203877 3.21536660127934 0.896857532084582 Q9H972 C14orf93 Q9H972.S428.p_C14orf93 Q9H972_S428s _1_1_428_428 Q9H972 Q9H972|A0A0C4DFZ6 Uncharacterized protein C14orf93 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.35971.35971.4 19.53 19.53 6.229 3 1 1 0 923.9346 3612.7478 S428s TMT10 418 (R) LWNDVTEELMsDEEDSLNEPGVWVARPPR (F) LWNDVT(0.0)EELMS(0.99)DEEDS(0.0)LNEPGVWVARPPR s:Phosphorylated S C14orf93 59380.4 4 4 2148.1 95.78 HUMAN 1 16.7593 3.895 DVVDLSESLPLAEEL-p Q96QE3;S219-p DVVDLSESLPLAEEL 0.469656474228868 0.00312254418097847 -0.115 -0.678666666666667 6.06164437602073 37.6417964169376 -0.115 -0.678666666666667 0.247648420498844 0.000172115648806005 -1.29553758829302 -9.11962114267945 Q96QE3 ATAD5 Q96QE3.S219.p_ATAD5 Q96QE3_S219s _1_1_219_219 Q96QE3 Q96QE3|A0A075B754|Q96QE3-2 ATPase family AAA domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35139.35139.3 11.67 11.67 1.193 2 1 1 0 984.5239 2871.5902 S219s TMT10 210 (K) CRDVVDLSEsLPLAEELNLLK (K) CRDVVDLS(0.0)ES(0.99)LPLAEELNLLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATAD5 209620.3 6 24 316.2 367.51 HUMAN 1 -6.0616 -37.6418 DVVGAPLTPNSRKRR-p Q9NPF5;T445-p DVVGAPLTPNSRKRR 0.945799822044031 0.825401001968374 -0.0103333333333333 0.023 0.475704412134649 1.1670399234685 -0.0103333333333333 0.023 0.896250805068605 0.764356578379331 -0.136645896327262 0.315237489297714 Q9NPF5 DMAP1 Q9NPF5.T445.p_DMAP1 Q9NPF5_T445t _1_1_445_445 Q9NPF5 Q9NPF5 DNA methyltransferase 1-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.31865.31865.5 27.73 27.73 1.812 7 1 1 0 1022.7346 5029.6886 T445t TMT10 401 (R) AGVLGGPATPASGPGPASAEPAVTEPGLGPDPKDTIIDVVGAPLtPNSR (K) AGVLGGPAT(0.0)PAS(0.0)GPGPAS(0.0)AEPAVT(0.0)EPGLGPDPKDT(0.0)IIDVVGAPLT(0.99)PNS(0.0)R K:TMT10,t:Phosphorylated T DMAP1 53162.8 12 3 1615.1 127.51 HUMAN 1 -0.4757 1.167 DVVILGRSL______-p O60502;S915-p DVVILGRSL______ 0.00956415249523423 0.0151326960325171 -1.168 -0.814666666666667 47.5694672121723 25.1795259317908 -1.168 -0.814666666666667 1.75006137111404e-05 0.00303422237648955 -14.1634828190196 -5.08298567686512 O60502 MGEA5 O60502.S915.p_MGEA5 O60502_S915s _1_1_915_915 O60502 O60502|O60502-4|O60502-2 Protein O-GlcNAcase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25149.25149.2 11.63 11.63 99 1 1 1 0 640.8631 1200.7513 S915s TMT10 908 (K) DVVILGRsL (-) DVVILGRS(1.0)L s:Phosphorylated S MGEA5 103997.3 1 5 1909.1 107.89 HUMAN 1 -47.5695 -25.1795 DVVLNRRSCMAATLR-p Q9UBU9;S251-p DVVLNRRSCMAATLR 0.188546819611632 0.245735953606169 -0.41 0.250666666666667 14.2208837738613 8.03395380334066 -0.41 0.250666666666667 0.0378365580829145 0.157255056748182 -2.73356401204612 1.64052788393396 Q9UBU9 NXF1 Q9UBU9.S251.p_NXF1 Q9UBU9_S251s _1_1_251_251 Q9UBU9 Q9UBU9|Q9UBU9-2 Nuclear RNA export factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10667.10667.2 11.11 5.69 4.117 2 1 1 0 609.7818 1138.591 S251s TMT10 251 (R) sCMAATLR (I) S(0.99)CMAAT(0.0)LR C:Carbamidomethylation,s:Phosphorylated S NXF1 70694.6 1 3 2627.1 76.41 HUMAN 1 -14.2209 8.034 DVVSPFGTPFGSSVM-p Q9BTX1;T449-p DVVSPFGTPFGSSVM 0.297184072075513 0.603235249882192 0.162666666666667 0.0493333333333334 9.92575886273974 2.97831466785925 0.162666666666667 0.0493333333333334 0.101724160334246 0.503696036191115 1.96881506714384 0.715904248335426 Q9BTX1 NDC1 Q9BTX1.T449.p_NDC1 Q9BTX1_T449t _1_1_449_449 Q9BTX1 Q9BTX1|Q9BTX1-2|Q9BTX1-5|Q9BTX1-6|Q9BTX1-4 Nucleoporin NDC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30860.30860.3 15.8 15.8 1.845 6 1 1 0 835.4095 2424.2431 T449t TMT10 438 (K) LSTPDVVSPFGtPFGSSVMNR (M) LS(0.0)T(0.0)PDVVS(0.0)PFGT(0.99)PFGS(0.0)S(0.0)VMNR t:Phosphorylated T NDC1 76988 4 8 1059.1 182.55 HUMAN 1 9.9258 2.9783 DWGEDHDSALDEEED-p Q8TDJ6-3;S1984-p DWGEDHDSALDEEED 0.866081613861063 0.0840964096308611 -0.0323333333333333 0.199333333333333 1.21488606911702 14.2337977084436 -0.0323333333333333 0.199333333333333 0.755981892171548 0.0377242165471327 -0.326944463100965 2.73427248430987 Q8TDJ6 DMXL2 Q8TDJ6.3.S1984.p_DMXL2 Q8TDJ6-3_S1984s _1_1_1984_1984 Q8TDJ6-3 Q8TDJ6-3|Q8TDJ6-2 Isoform 3 of DmX-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33249.33449.4 20.94 20.94 99 1 1 1 0 1006.4611 3942.8479 S1984s TMT10 1969 (K) VDEEPLNLDWGEDHDsALDEEEDDAVGLVMK (S) VDEEPLNLDWGEDHDS(1.0)ALDEEEDDAVGLVMK K:TMT10,s:Phosphorylated S DMXL2 343259.8 2 6 1366.1 149.7 HUMAN 1 -1.2149 14.2338 DWRGPPNSPDLKLSD-p Q6ZSZ5;S760-p DWRGPPNSPDLKLSD 0.12869352151856 0.444152484386393 -0.325333333333333 -0.0743333333333333 18.4466085104706 4.69285528603614 -0.325333333333333 -0.0743333333333333 0.0143001024522252 0.339402058012952 -3.55322090845969 -1.04725839418483 Q6ZSZ5 ARHGEF18 Q6ZSZ5.S760.p_ARHGEF18 Q6ZSZ5_S760s _1_1_760_760 Q6ZSZ5 Q6ZSZ5|Q6ZSZ5-2 Rho guanine nucleotide exchange factor 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14745.14745.3 9.22 9.22 99 1 1 1 0 640.6625 1840.0118 S760s TMT10 753 (R) DWRGPPNsPDLK (L) DWRGPPNS(1.0)PDLK K:TMT10,s:Phosphorylated S ARHGEF18 131234.5 7 5 799.1 223.19 HUMAN 1 -18.4466 -4.6929 DWRKSEVSPRIPECQ-p Q8IZT6;S435-p DWRKSEVSPRIPECQ 0.0789448224408241 0.00195877573093401 -0.496666666666667 -0.778333333333333 23.5281091402378 42.3505277113198 -0.496666666666667 -0.778477047226108 0.00443801827220179 5.82032490693279e-05 -4.68039354636434 -11.2408371798295 Q8IZT6 ASPM Q8IZT6.S435.p_ASPM Q8IZT6_S435s _1_1_435_435 Q8IZT6 Q8IZT6|Q8IZT6-2 Abnormal spindle-like microcephaly-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10615.10615.3 13.59 13.59 3.547 3 1 1 0 704.6906 2032.0897 S435s TMT10 432 (K) SEVsPRIPECQGSK (S) S(0.0)EVS(0.99)PRIPECQGS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ASPM 413444.1 1 6 949.1 196.42 HUMAN 1 -23.5281 -42.3505 DWSGAEESDDENAVC-p P29375;S1603-p DWSGAEESDDENAVC 0.323389317414678 0.141566458981127 0.135666666666667 0.228333333333333 9.17787908987698 11.1878181089936 0.135666666666667 0.228333333333333 0.120840382422762 0.0760708360050071 1.8391590731128 2.18804071514708 P29375 KDM5A P29375.S1603.p_KDM5A P29375_S1603s _1_1_1603_1603 P29375 P29375|P29375-2 Lysine-specific demethylase 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20147.20147.5 20.13 16.03 6.568 4 1 1 0 988.2799 4857.4052 S1603s TMT10 1587 (K) KVLDIPSKYDWSGAEEsDDENAVCAAQNCQRPCK (D) KVLDIPS(0.0)KY(0.0)DWS(0.0)GAEES(0.99)DDENAVCAAQNCQRPCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S KDM5A 194944.7 2 9 446.1 309.57 HUMAN 1 9.1779 11.1878 DWSQKLNSLMSLVNK-p O00232;S434-p DWSQKLNSLMSLVNK 0.146674740935683 0.00489271294696127 -0.313 0.537333333333333 16.9401567571926 33.7291388053828 -0.313 0.537333333333333 0.0202294615977125 0.000423726981673245 -3.25085743211936 7.63787813884901 O00232 PSMD12 O00232.S434.p_PSMD12 O00232_S434s _1_1_434_434 O00232 O00232|O00232-2 26S proteasome non-ATPase regulatory subunit 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.32187.32187.3 10.65 10.65 2.687 2 1 1 0 552.9789 1576.9497 S434s TMT10 432 (K) LNsLMSLVNK (T) LNS(0.99)LMS(0.0)LVNK K:TMT10,s:Phosphorylated S PSMD12 53302.9 1 3 3138.1 59.7 HUMAN 1 -16.9402 33.7291 DWTHFGGSPPSDEIR-p Q92574;S682-p DWTHFGGSPPSDEIR 0.50580917835866 0.293304225220735 0.094 -0.105333333333333 5.4646944108847 7.03098858295124 0.094 -0.105333333333333 0.284138811078641 0.198107602286093 1.18857537776685 -1.46602968794462 Q92574 TSC1 Q92574.S682.p_TSC1 Q92574_S682s _1_1_682_682 Q92574 Q92574|Q92574-2 Hamartin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19690.19690.3 16.12 16.12 3.122 4 1 1 0 732.671 2116.0297 S682s TMT10 673 (K) SVDWTHFGGsPPSDEIR (T) S(0.0)VDWT(0.0)HFGGS(0.99)PPS(0.0)DEIR s:Phosphorylated S TSC1 130734.2 1 10 418.1 320.74 HUMAN 1 5.4647 -7.031 DYAKTILSLMTREKH-p P53396;S325-p DYAKTILSLMTREKH 0.213755987691511 0.646411947253565 -0.203 -0.044 12.9158159335588 2.58408911068486 -0.203 -0.044 0.0510997066115067 0.551557874008067 -2.49590841438805 -0.634509414131061 P53396 ACLY P53396.S325.p_ACLY P53396_S325s _1_1_325_325 P53396 P53396|P53396-2 ATP-citrate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29996.29996.2 9 9 2.794 3 1 1 0 622.337 1163.7019 S325s TMT10 322 (K) TILsLMTR (E) T(0.0)ILS(0.99)LMT(0.0)R s:Phosphorylated S ACLY 121749.9 1 2 1256.1 161.58 HUMAN 1 -12.9158 -2.5841 DYAPMESSDEEDEEF-p P55081;S53-p DYAPMESSDEEDEEF 0.978588331593317 0.986386848712151 -0.00433333333333333 -0.00366666666666666 0.186157257547319 0.0896338290301277 -0.00433333333333334 -0.00366666666666664 0.958041394534942 0.979572573590996 -0.0550929219522071 -0.0268071240339607 P55081 MFAP1 P55081.S53.p_MFAP1 P55081_S52sS53s_2_2_52_53 P55081 P55081 Microfibrillar-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23252.23252.5 21.3 21.3 11.655 5 2 2 0 861.0212 4141.1246 S52s S53s TMT10 39 (R) YVSGKRPDYAPMEssDEEDEEFQFIKK (A) Y(0.0)VS(0.0)GKRPDY(0.0)APMES(0.99)S(0.99)DEEDEEFQFIKK K:TMT10,s:Phosphorylated S MFAP1 51957.5 67 10 354.1 349.52 HUMAN 1 -0.1862 -0.0896 DYAVHPMSPVGRTSR-p Q9HAU0-6;S140-p DYAVHPMSPVGRTSR 0.574315878418945 0.111719958585726 0.0773333333333333 -0.183333333333333 4.43295352728362 12.5647443683543 0.0773333333333333 -0.183333333333333 0.360333505942113 0.0554020153359488 0.999035946836233 -2.43164287670136 Q9HAU0 PLEKHA5 Q9HAU0.6.S140.p_PLEKHA5 Q9HAU0-6_S140s _1_1_140_140 Q9HAU0-6 Q9HAU0-6|Q9HAU0-4|Q9HAU0-2|Q9HAU0-8|Q9HAU0-5|Q9HAU0-3 Isoform 6 of Pleckstrin homology domain-containing family A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20246.20246.4 27.82 27.82 5.141 7 1 1 0 886.6709 3463.6936 S140s TMT10 116 (K) ERPISMINEASNYNVTSDYAVHPMsPVGR (T) ERPIS(0.0)MINEAS(0.0)NY(0.0)NVT(0.0)S(0.0)DY(0.0)AVHPMS(0.99)PVGR s:Phosphorylated S PLEKHA5 147692.6 4 2 374.1 338.83 HUMAN 1 4.433 -12.5647 DYDHGSRSQESGYYD-p A8MXP9;S208-p DYDHGSRSQESGYYD 0.244751704289102 0.144186214146611 0.279333333333333 0.170333333333333 11.6911195015116 11.0790201481961 0.279333333333333 0.170333333333333 0.0677466851252957 0.0780006075030918 2.27766459160785 2.16897283609706 A8MXP9 NotFound A8MXP9.S208.p_NotFound A8MXP9_S208s _1_1_208_208 A8MXP9 A8MXP9|P43243|D6REM6 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10438.10438.3 13.58 13.58 4.505 5 1 1 0 793.3188 2297.9728 S208s Hydrogen 208 (R) sQESGYYDRMDYEDDRLR (D) S(0.99)QES(0.0)GY(0.0)Y(0.0)DRMDY(0.0)EDDRLR s:Phosphorylated S MATR3 100478.9 3 15 92.1 615.57 HUMAN 1 11.6911 11.079 DYDKTKDSGLPSQGL-p Q12959-2;S598-p DYDKTKDSGLPSQGL 0.364260666143879 0.384416007267234 0.351 0.156 8.13939714797293 5.51731357728789 0.351 0.156 0.153483002054466 0.280716953660916 1.65933398296078 1.19780690500062 Q12959 DLG1 Q12959.2.S598.p_DLG1 Q12959-2_S598s _1_1_598_598 Q12959-2 Q12959-2|Q12959-7|Q12959-4|A0A0C4DFT3|Q12959-6|Q12959-3|Q12959-5|Q12959-9|Q12959-8|E7EQD7 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17954.17954.3 12.35 12.35 1.646 3 1 1 0 753.7495 2179.269 S598s TMT10 595 (K) TKDsGLPSQGLNFK (F) T(0.0)KDS(0.99)GLPS(0.0)QGLNFK K:TMT10,s:Phosphorylated S DLG1 103604.4 2 18 196.1 460.79 HUMAN 1 8.1394 5.5173 DYEEGPNSLINEEEF-p Q9Y5P4;S315-p DYEEGPNSLINEEEF 0.993911734338014 0.75846726294219 0.00133333333333333 -0.04 0.053324669109743 1.65762416325042 0.00133333333333333 -0.04 0.987796613884221 0.68271207416774 0.0160146302404809 -0.431523646706876 Q9Y5P4 COL4A3BP Q9Y5P4.S315.p_COL4A3BP Q9Y5P4_S315s_1_1_315_315 Q9Y5P4 Q9Y5P4-3|Q9Y5P4-2 Collagen type IV alpha-3-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.33165.33165.5 25.42 21.51 4.1 5 1 1 0 1131.3381 5571.6919 N314n S315s TMT10 302 (K) SHFGGPDYEEGPnsLINEEEFFDAVEAALDRQDKIEEQSQSEK (V) S(0.0)HFGGPDY(0.0)EEGPN(0.99)S(0.99)LIN(0.0)EEEFFDAVEAALDRQDKIEEQS(0.0)QS(0.0)EK K:TMT10,n:Deamidated,s:Phosphorylated S COL4A3BP 71518.3 2 5 1173.1 170.04 HUMAN 1 0.0533 -1.6576 DYEKLQQSPKPGEKE-p Q8TDR0-2;S491-p DYEKLQQSPKPGEKE 0.278318764774886 0.00489957889240122 -0.158666666666667 -0.664 10.5066007086198 33.7146320015533 -0.158666666666667 -0.664 0.0889897382044866 0.000425144729820894 -2.06987844978236 -7.63279944551216 Q8TDR0 TRAF3IP1 Q8TDR0.2.S491.p_TRAF3IP1 Q8TDR0-2_S491s _1_1_491_491 Q8TDR0-2 Q8TDR0|Q8TDR0-2 Isoform 2 of TRAF3-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8953.8953.3 9.77 9.77 99 1 1 1 0 627.0273 1799.0994 S491s TMT10 488 (K) LQQsPKPGEK (E) LQQS(1.0)PKPGEK K:TMT10,s:Phosphorylated S TRAF3IP1 71813.2 2 4 2201.1 93.61 HUMAN 1 -10.5066 -33.7146 DYEQGLASELDQ___-p Q99571-2;S400-p DYEQGLASELDQ___ 0.976111830837964 0.268201124581141 -0.00600000000000001 -0.127666666666667 0.205182670034008 7.52711891109907 -0.006 -0.127666666666667 0.953853621646087 0.17672097904587 -0.0605992104288888 -1.55254120184921 Q99571 P2RX4 Q99571.2.S400.p_P2RX4 Q99571-2_S400s _1_1_400_400 Q99571-2 Q99571-2|Q99571-3 Isoform 2 of P2X purinoceptor 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25326.25326.2 16.89 16.89 16.893 4 1 1 0 1294.6199 2508.2546 S400s TMT10 388 (K) YKYVEDYEQGLAsELDQ (-) Y(0.0)KY(0.0)VEDY(0.0)EQGLAS(0.99)ELDQ K:TMT10,s:Phosphorylated S P2RX4 46160.3 3 1 4646.1 28.38 HUMAN 1 -0.2052 -7.5271 DYFSDKESGKQKFND-p Q9NYF8;S389-p DYFSDKESGKQKFND 0.97076436181379 0.00865905619442014 -0.01 0.800333333333333 0.254015261423647 29.262012658525 -0.01 0.800333333333333 0.943188449949369 0.00118521935259261 -0.0746325927622739 6.20118170124242 Q9NYF8 BCLAF1 Q9NYF8.S389.p_BCLAF1 Q9NYF8_S385sS389s_2_2_385_389 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|A0A1W2PQ43 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24572.24572.4 12.47 12.47 1.167 3 2 2 0 820.8723 3120.5253 S385s S389s TMT10 371 (R) AEGEWEDQEALDYFsDKEsGK (Q) AEGEWEDQEALDY(0.0)FS(0.99)DKES(0.99)GK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 5 44 10.1 1293.04 HUMAN 1 -0.254 29.262 DYGARSMSSADVEVA-p I3L4C2;S544-p DYGARSMSSADVEVA 0.336940767668124 0.210184640168216 0.158333333333333 -0.137 8.8014851591613 8.91118374888057 0.158333333333333 -0.137 0.131780601066707 0.128493637934445 1.7739996690551 -1.79235052143271 I3L4C2 BAIAP2 I3L4C2.S544.p_BAIAP2 I3L4C2_S544s _1_1_544_544 I3L4C2 I3L4C2|Q9UQB8-5 Brain-specific angiogenesis inhibitor 1-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20259.20259.2 11.77 11.77 1.104 3 1 1 0 804.3696 1527.7675 S544s TMT10 542 (R) SMsSADVEVARF (-) S(0.0)MS(0.99)S(0.0)ADVEVARF s:Phosphorylated S BAIAP2 61608.4 3 19 386.1 333.05 HUMAN 1 8.8015 -8.9112 DYGLGGASPRGDPGL-p Q9C0C2;S762-p DYGLGGASPRGDPGL 0.33241278822377 0.039676560984998 -0.201666666666667 -0.337 8.9315830308291 18.7951614641788 -0.201666666666667 -0.337 0.127891504656998 0.0131972624535133 -1.79651945771712 -3.6218852092996 Q9C0C2 TNKS1BP1 Q9C0C2.S762.p_TNKS1BP1 Q9C0C2_S762s _1_1_762_762 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29516.29516.4 31.76 31.76 5.895 10 1 1 0 1071.4774 4202.9199 S762s TMT10 727 (K) DLQSEFGITGDPQPSSFSPSSWCQGASQDYGLGGAsPR (G) DLQS(0.0)EFGIT(0.0)GDPQPS(0.0)S(0.0)FS(0.0)PS(0.0)S(0.0)WCQGAS(0.0)QDY(0.0)GLGGAS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S TNKS1BP1 182819.3 6 27 4.1 2105.7 HUMAN 1 -8.9316 -18.7952 DYGLKPYSPLASLSG-p Q13469;S73-p DYGLKPYSPLASLSG 0.101218422745456 0.0275735312398903 -0.575 -0.357 21.0288709513084 21.1488211331182 -0.575 -0.361154637991156 0.00789065226664334 0.00767569813407243 -4.10331937730445 -4.1258061855514 Q13469 NFATC2 Q13469.S73.p_NFATC2 Q13469_S73s _1_1_73_73 Q13469 Q13469|Q13469-2|Q13469-4|Q13469-3 Nuclear factor of activated T-cells, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31393.31393.4 24.05 24.05 3.835 8 1 1 0 1027.7715 4028.1057 S73s TMT10 51 (K) VASPPSGPAYPDDVLDYGLKPYsPLASLSGEPPGR (F) VAS(0.0)PPS(0.0)GPAY(0.0)PDDVLDY(0.0)GLKPY(0.0)S(0.99)PLAS(0.0)LS(0.0)GEPPGR K:TMT10,s:Phosphorylated S NFATC2 101056.9 1 2 843.1 214.04 HUMAN 1 -21.0289 -21.1488 DYGNGLESEELEPEE-p Q86U42;S52-p DYGNGLESEELEPEE 0.43773303002828 0.341682876478045 -0.160666666666667 -0.126333333333333 6.60653337570964 6.17635423973902 -0.160666666666667 -0.126333333333333 0.21844729055022 0.241192931491972 -1.39194746733179 -1.31559778237808 Q86U42 PABPN1 Q86U42.S52.p_PABPN1 Q86U42_S52s_1_1_52_52 Q86U42 Q86U42|Q86U42-2 Polyadenylate-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25919.25919.4 23.78 21.63 1.173 2 1 1 0 1392.3878 5485.5466 N48n S52s Hydrogen 26 (R) HLVPGAGGEAGEGAPGGAGDYGnGLEsEELEPEELLLEPEPEPEPEEEPPRPR (A) HLVPGAGGEAGEGAPGGAGDY(0.0)GN(1.0)GLES(0.99)EELEPEELLLEPEPEPEPEEEPPRPR n:Deamidated,s:Phosphorylated S PABPN1 32862.6 2 2 1523.1 134.21 HUMAN 1 -6.6065 -6.1764 DYKEGEMTLKSALAL-p P25789;T185-p DYKEGEMTLKSALAL 0.200797395490016 0.0101060071230377 -0.292666666666667 0.633333333333333 13.5475723386468 28.031683892105 -0.292666666666667 0.633333333333333 0.0441817349679759 0.00157337270162238 -2.61022054668536 5.84642934160212 P25789 PSMA4 P25789.T185.p_PSMA4 P25789_T185t _1_1_185_185 P25789 P25789|H0YN18|P25789-2 Proteasome subunit alpha type-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13575.13575.3 11.85 11.85 11.852 2 1 1 0 703.7035 2029.1243 T185t TMT10 177 (K) QDYKEGEMtLK (S) QDY(0.0)KEGEMT(0.99)LK K:TMT10,t:Phosphorylated T PSMA4 29768.5 1 3 4107.1 37.53 HUMAN 1 -13.5476 28.0317 DYLDDEDSD______-p Q92882;S213-p DYLDDEDSD______ 0.151446699968719 0.0128986737673033 0.238 0.390666666666667 16.5109789749559 26.3090341276834 0.238 0.390666666666667 0.0223306879372243 0.00233935745465511 3.16692886113322 5.37596715779664 Q92882 OSTF1 Q92882.S213.p_OSTF1 Q92882_S213s _1_1_213_213 Q92882 Q92882 Osteoclast-stimulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21441.21441.3 17.68 17.68 3.663 4 1 1 0 670.9354 1930.8239 S213s TMT10 200 (R) TLSNAEDYLDDEDsD (-) T(0.0)LS(0.0)NAEDY(0.0)LDDEDS(0.99)D s:Phosphorylated S OSTF1 23957.5 11 4 2391.1 85.48 HUMAN 1 16.511 26.309 DYLIEEVSAEEEELL-p Q9BXP5;S570-p DYLIEEVSAEEEELL 0.960338220515773 0.437455044905471 -0.00933333333333334 0.0906666666666667 0.339067028240217 4.78349065321566 -0.00933333333333333 0.0906666666666667 0.924896843272437 0.33239228473445 -0.0987433452530069 1.06402083497049 Q9BXP5 SRRT Q9BXP5.S570.p_SRRT Q9BXP5_S570s _1_1_570_570 Q9BXP5 Q9BXP5|Q9BXP5-3|Q9BXP5-2|Q9BXP5-4|Q9BXP5-5 Serrate RNA effector molecule homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.35086.35086.5 9.45 9.45 2.198 5 1 1 0 1130.3549 5567.8008 S570s TMT10 560 (K) NITDYLIEEVsAEEEELLGSSGGAPPEEPPKEGNPAEINVERDEK (L) NIT(0.0)DY(0.0)LIEEVS(0.99)AEEEELLGS(0.0)S(0.0)GGAPPEEPPKEGNPAEINVERDEK K:TMT10,s:Phosphorylated S SRRT 101121.1 1 12 321.1 364.45 HUMAN 1 -0.3391 4.7835 DYLPEDESPTKEQDK-p Q9NVT9;S246-p DYLPEDESPTKEQDK 0.978236693407615 0.693740610855717 0.00433333333333333 0.0383333333333334 0.189086488544884 2.18022997563014 0.00433333333333333 0.0383333333333334 0.957395432296401 0.605308820475299 0.0559421307135662 0.54828956842621 Q9NVT9 ARMC1 Q9NVT9.S246.p_ARMC1 Q9NVT9_S246s _1_1_246_246 Q9NVT9 Q9NVT9|Q9NVT9-2 Armadillo repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33574.33574.5 23.55 18.83 2.59 7 1 1 0 924.2343 4537.1744 S246s TMT10 214 (K) SESGEEMLVPFQDTPVEVEQNTELPDYLPEDEsPTK (E) S(0.0)ES(0.0)GEEMLVPFQDT(0.0)PVEVEQNT(0.0)ELPDY(0.0)LPEDES(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S ARMC1 31508.3 16 3 1358.1 150.21 HUMAN 1 0.1891 2.1802 DYNYEVGSVEGKELL-p Q15047;S1271-p DYNYEVGSVEGKELL 0.5493736861152 0.102331537175361 -0.097 0.210666666666667 4.8025583337854 13.0743778820771 -0.097 0.210666666666667 0.330936116824972 0.0492676913250596 -1.06774850147056 2.52308429738522 Q15047 SETDB1 Q15047.S1271.p_SETDB1 Q15047_S1271s _1_1_1271_1271 Q15047 Q15047|Q15047-3 Histone-lysine N-methyltransferase SETDB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24885.24885.3 20.82 20.82 2.604 5 1 1 0 886.0919 2576.2921 S1271s TMT10 1257 (R) AGTELTWDYNYEVGsVEGK (E) AGT(0.0)ELT(0.0)WDY(0.0)NY(0.0)EVGS(0.99)VEGK K:TMT10,s:Phosphorylated S SETDB1 145208.3 1 5 2410.1 84.76 HUMAN 1 -4.8026 13.0744 DYQYSQRSQAGHTLH-p Q99959;S172-p DYQYSQRSQAGHTLH 0.23482715126987 0.143868609705173 0.226666666666667 0.257666666666667 12.0617497140659 11.0916049958433 0.226666666666667 0.257666666666667 0.0622049619250996 0.0777749069903115 2.34329204921683 2.17117730124181 Q99959 PKP2 Q99959.S172.p_PKP2 Q99959_S172s _1_1_172_172 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3165.3165.3 18.43 18.43 5.744 3 1 1 0 599.6177 1716.8727 S172s TMT10 172 (R) sQAGHTLHHQESR (R) S(0.99)QAGHT(0.0)LHHQES(0.0)R s:Phosphorylated S PKP2 97926.6 2 9 257.1 399.17 HUMAN 1 12.0617 11.0916 DYRLCERYAMVYGYN-p P08493-2;Y107-p DYRLCERYAMVYGYN 0.357172198749098 0.128972970347564 -0.23 0.279666666666667 8.3109669433735 11.7249371099935 -0.23 0.279666666666667 0.147537800830617 0.0672212043316225 -1.68906661013864 2.28253070168678 P08493 MGP P08493.2.Y107.p_MGP P08493-2_Y107y _1_1_107_107 P08493-2 P08493-2 Isoform 2 of Matrix Gla protein GG20160819_MSz_CCLE_T4D7_pY_Injection_01.19666.19740.2 26.1 26.1 14.937 4 1 1 0 932.9195 1784.8628 Y107y TMT10 107 (R) yAMVYGYNAAYNR (Y) Y(0.99)AMVY(0.0)GY(0.0)NAAY(0.0)NR y:Phosphorylated Y MGP 15496.3 18 1 22.1 72.6 HUMAN 1 -8.311 11.7249 DYRQFRKSVLADQGK-p Q9NYF8;S414-p DYRQFRKSVLADQGK 0.962849921197336 0.0234258005977494 -0.00900000000000001 1.22233333333333 0.318060767555414 22.2400607317252 -0.00900000000000001 1.22233333333333 0.929381285908349 0.00597026937702849 -0.0928266087090318 4.37235319575425 Q9NYF8 BCLAF1 Q9NYF8.S414.p_BCLAF1 Q9NYF8_S414s _1_1_414_414 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|A0A1W2PQ43 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11374.11374.3 11.3 8.74 99 1 1 1 0 452.583 1275.7673 S414s TMT10 414 (K) sVLADQGK (S) S(1.0)VLADQGK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 2 19 10.1 1293.04 HUMAN 1 -0.3181 22.2401 DYRRLSESQLSFRRS-p Q96PK6;S620-p DYRRLSESQLSFRRS 0.473457974610615 0.531636312639737 -0.116 0.091 5.98094981919457 3.68821809340501 -0.116 0.091 0.252292893760966 0.427738350837073 -1.28116919242372 0.856905403823103 Q96PK6 RBM14 Q96PK6.S620.p_RBM14 Q96PK6_S620s _1_1_620_620 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14627.14627.3 10.8 10.8 2.467 3 1 1 0 511.2664 1451.8168 S620s TMT10 617 (R) LSEsQLSFRR (S) LS(0.0)ES(0.99)QLS(0.0)FRR s:Phosphorylated S RBM14 69661.6 5 16 151.1 510.8 HUMAN 1 -5.9809 3.6882 DYRRRLLSVNIRVRA-p P07814;S1336-p DYRRRLLSVNIRVRA 0.525170023338528 0.0514526161808679 -0.0913333333333333 -0.330333333333333 5.17421353318917 17.1998702866961 -0.0913333333333333 -0.330333333333333 0.303793618405194 0.0190551763033644 -1.13588991122733 -3.29955393913821 P07814 EPRS P07814.S1336.p_EPRS P07814_S1336s _1_1_1336_1336 P07814 P07814 Bifunctional glutamate/proline--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22583.22583.2 9.99 1.74 99 1 1 1 0 562.326 1043.6774 S1336s TMT10 1334 (R) LLsVNIR (V) LLS(1.0)VNIR s:Phosphorylated S EPRS 172185.3 4 14 375.1 337.76 HUMAN 1 -5.1742 -17.1999 DYRYRRRSPSPYYSR-p Q13595;S260-p DYRYRRRSPSPYYSR 0.751843730021537 0.0602737572418098 0.044 0.277 2.36279778830443 16.2506232905231 0.044 0.277 0.580390401111454 0.0237103339539741 0.587727283725906 3.11421832719882 Q13595 TRA2A Q13595.S260.p_TRA2A Q13595_S260s _1_1_260_260 Q13595 P62995|Q13595|P62995-3|Q13595-3|Q13595-4 Transformer-2 protein homolog alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7283.7283.2 12.87 4.11 1.433 5 1 1 0 633.2922 1185.6102 S260s TMT10 260 (R) sPSPYYSR (Y) S(0.99)PS(0.0)PY(0.0)Y(0.0)S(0.0)R s:Phosphorylated S TRA2A 32745.1 19 118 8.2 1346.57 HUMAN 1 2.3628 16.2506 DYSDGRRTFPRIRRH-p Q99759;T294-p DYSDGRRTFPRIRRH 0.197706402378504 0.737130355920481 0.207333333333333 0.0436666666666667 13.7220365403677 1.82615304987397 0.207333333333333 0.0436666666666667 0.0424420493454853 0.656726732679082 2.6420242443678 0.469895803247803 Q99759 MAP3K3 Q99759.T294.p_MAP3K3 Q99759_T294t _1_1_294_294 Q99759 Q99759-2|J3QRB6|J3KRN4 Mitogen-activated protein kinase kinase kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5377.5377.4 8.78 8.78 8.784 3 1 1 0 420.4534 1598.8237 T294t TMT10 287 (K) DYSDGRRtFPR (I) DY(0.0)S(0.0)DGRRT(0.99)FPR t:Phosphorylated T MAP3K3 71295.8 3 4 1082.2 179.91 HUMAN 1 13.722 1.8262 DYSQFQESDDADEDY-p Q9H1E3;S19-p DYSQFQESDDADEDY 0.527344543785721 0.0330183593605983 0.0843333333333333 0.274 5.14150799373276 19.974689726538 0.0843333333333333 0.274 0.306090041762597 0.0100584492111897 1.12992807155344 3.86990523531783 Q9H1E3 NUCKS1 Q9H1E3.S19.p_NUCKS1 Q9H1E3_S19s _1_1_19_19 Q9H1E3 Q9H1E3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17369.17992.3 25.85 25.85 4.419 6 1 1 0 1153.5157 3378.565 S19s TMT10 10 (K) VVDYSQFQEsDDADEDYGRDSGPPTK (K) VVDY(0.0)S(0.0)QFQES(0.99)DDADEDY(0.0)GRDS(0.0)GPPT(0.0)K K:TMT10,s:Phosphorylated S NUCKS1 27295.9 88 1 48.1 767.83 HUMAN 1 5.1415 19.9747 DYSRSRGSPSSYNSS-p Q9H201;S182-p DYSRSRGSPSSYNSS 0.0821409724815468 0.0104414023033067 0.386 0.502333333333333 23.1926395778307 27.8002720975445 0.386 0.502333333333333 0.00479441962309083 0.00165948293296968 4.60011550979032 5.78149358505874 Q9H201 EPN3 Q9H201.S182.p_EPN3 Q9H201_S182s _1_1_182_182 Q9H201 Q9H201|I6L9I8 Epsin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3685.3685.2 10.01 5.61 1.511 10 1 1 0 976.4391 1871.9045 S182s TMT10 179 (R) SRGsPSSYNSSSSSPR (Y) S(0.0)RGS(0.99)PS(0.0)S(0.0)Y(0.0)NS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)PR s:Phosphorylated S EPN3 68392.2 4 2 953.1 196.01 HUMAN 1 23.1926 27.8003 DYSWSYQTPPSSPSS-p Q765P7;T260-p DYSWSYQTPPSSPSS 0.187863102695022 0.598010106872165 0.275 0.0536666666666667 14.2487301187161 3.02324542471262 0.275 0.0536666666666667 0.0375947315578854 0.498511817002636 2.738701156423 0.725027550098591 Q765P7 MTSS1L Q765P7.T260.p_MTSS1L Q765P7_T260t _1_1_260_260 Q765P7 Q765P7|A0A087WXN9 MTSS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14101.14101.3 13.15 13.15 3.128 13 1 1 0 853.6968 2479.1211 T260t TMT10 251 (K) GSDYSWSYQtPPSSPSSSSSR (K) GS(0.0)DY(0.0)S(0.0)WS(0.0)Y(0.0)QT(0.99)PPS(0.0)S(0.0)PS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)R t:Phosphorylated T MTSS1L 80498.5 1 1 425.1 319.48 HUMAN 1 14.2487 3.0232 DYTTGGESCDELEED-p Q16625;S408-p DYTTGGESCDELEED 0.150283451076775 0.2669001531334 0.415666666666667 -0.188333333333333 16.5826302924876 7.55345139991085 0.415666666666667 -0.188333333333333 0.021965291480626 0.175652712208231 3.18087627585865 -1.55712080584613 Q16625 OCLN Q16625.S408.p_OCLN Q16625_S408s _1_1_408_408 Q16625 Q16625|A0A0G2JMZ8|Q16625-3|Q16625-2|Q16625-4|Q16625-5 Occludin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20993.20993.5 27.94 27.63 1.132 10 1 1 0 992.4288 4878.1547 S408s TMT10 392 (K) RTEQDHYETDYTTGGEsCDELEEDWIREYPPITSDQQR (Q) RT(0.0)EQDHY(0.0)ET(0.0)DY(0.0)T(0.0)T(0.0)GGES(0.99)CDELEEDWIREY(0.0)PPIT(0.0)S(0.0)DQQR C:Carbamidomethylation,s:Phosphorylated S OCLN 59542.1 1 9 840.1 214.78 HUMAN 1 16.5826 -7.5535 DYTTQPASQEQPAQP-p Q9HCK8;S101-p DYTTQPASQEQPAQP 0.231415378144705 0.0739209332425326 0.203666666666667 -0.245666666666667 12.2194193212475 15.0158656074229 0.203666666666667 -0.245666666666667 0.0599871277417041 0.0315074633141763 2.37131498020903 -2.87954584807103 Q9HCK8 CHD8 Q9HCK8.S101.p_CHD8 Q9HCK8_S101s _1_1_101_101 Q9HCK8 Q9HCK8 Chromodomain-helicase-DNA-binding protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26179.26179.5 23.85 23.85 2.332 14 1 1 0 1035.3265 5092.6367 S101s TMT10 81 (K) ESTAPAPESITLHDYTTQPAsQEQPAQPVLQTSTPTSGLLQVSK (S) ES(0.0)T(0.0)APAPES(0.0)IT(0.0)LHDY(0.0)T(0.0)T(0.0)QPAS(0.99)QEQPAQPVLQT(0.0)S(0.0)T(0.0)PT(0.0)S(0.0)GLLQVS(0.0)K K:TMT10,s:Phosphorylated S CHD8 292339.6 1 1 419.1 320.67 HUMAN 1 12.2194 -15.0159 DYVERVDSPMAYSSN-p Q16625;S321-p DYVERVDSPMAYSSN 0.58471981560589 0.0259059289164277 0.0733333333333333 -0.327333333333333 4.28770164472707 21.5770948599575 0.0727323479635435 -0.327333333333333 0.372588834008239 0.00695489397976924 0.971739848112172 -4.22153198446288 Q16625 OCLN Q16625.S321.p_OCLN Q16625_S321s _1_1_321_321 Q16625 Q16625|A0A0G2JMZ8|Q16625-3|Q16625-2|Q16625-4 Occludin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19483.19483.5 19.08 19.08 1.322 9 1 1 0 759.3618 3712.8165 S321s TMT10 300 (K) NVSAGTQDVPSPPSDYVERVDsPMAYSSNGK (V) NVS(0.0)AGT(0.0)QDVPS(0.0)PPS(0.0)DY(0.0)VERVDS(0.99)PMAY(0.0)S(0.0)S(0.0)NGK K:TMT10,s:Phosphorylated S OCLN 59542.1 4 1 840.1 214.78 HUMAN 1 4.2877 -21.5771 DYVRRRLTAEDLFEA-p Q15149;T3785-p DYVRRRLTAEDLFEA 0.886118944763575 0.00838457405165062 0.0446666666666667 0.464666666666667 1.02611537271295 29.5196901854966 0.0446666666666667 0.464666666666667 0.789566043802738 0.00111694292477147 0.280416425761385 6.27756773190954 Q15149 PLEC Q15149.T3785.p_PLEC Q15149_T3785t _1_1_3785_3785 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18474.18474.3 12.3 12.3 99 1 1 1 0 543.9445 1549.8536 T3785t TMT10 3783 (R) RLtAEDLFEAR (I) RLT(1.0)AEDLFEAR t:Phosphorylated T PLEC 533778 1 28 44.1 794.85 HUMAN 1 1.0261 29.5197 EAADKGHSPAQKPKT-p Q14966;S605-p EAADKGHSPAQKPKT 0.546775061594564 0.0889989061667031 0.199666666666667 0.616333333333333 4.84085296633009 13.9044831775465 0.199666666666667 0.616333333333333 0.328030860621003 0.0406959960289322 1.07481124610674 2.67380743609424 Q14966 ZNF638 Q14966.S605.p_ZNF638 Q14966_S605s _1_1_605_605 Q14966 Q14966|Q14966-3|Q14966-4|A0A096LPH6|Q14966-2 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6427.6427.5 18.12 18.12 99 1 1 1 0 542.9109 2630.5548 S605s TMT10 596 (K) HLEAADKGHsPAQKPK (T) HLEAADKGHS(1.0)PAQKPK K:TMT10,s:Phosphorylated S ZNF638 222047.2 7 10 165.1 494.68 HUMAN 1 4.8409 13.9045 EAAEPPKTPPSSCDS-p Q9NQR1;T181-p EAAEPPKTPPSSCDS 0.868321978932342 0.0164104377170054 0.035 -0.369333333333333 1.19683068911188 24.6491181508932 0.035 -0.369333333333333 0.759131357247358 0.00342837393729939 0.322547801107392 -4.94938986575626 Q9NQR1 SETD8 Q9NQR1.T181.p_SETD8 Q9NQR1_T181t _1_1_181_181 Q9NQR1 Q9NQR1|Q9NQR1-2|A0A0C4DFR3 N-lysine methyltransferase KMT5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12241.12241.3 15.75 10.51 1.343 6 1 1 0 1032.8497 3016.5864 T181t TMT10 173 (K) SEAAEPPKtPPSSCDSTNAAIAK (Q) S(0.0)EAAEPPKT(0.99)PPS(0.0)S(0.0)CDS(0.0)T(0.0)NAAIAK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T KMT5A 43402.6 3 2 4621.1 28.68 HUMAN 1 1.1968 -24.6491 EAAETGVSENEENPV-p Q29RF7;S1195-p EAAETGVSENEENPV 0.380643803112374 0.146819010551792 0.158333333333333 0.201333333333333 7.74953359945249 10.9719527655187 0.158333333333333 0.201333333333333 0.167898431909145 0.0799474697672763 1.59167900467531 2.15022986687615 Q29RF7 PDS5A Q29RF7.S1195.p_PDS5A Q29RF7_S1195s _1_1_1195_1195 Q29RF7 Q29RF7 Sister chromatid cohesion protein PDS5 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8700.8700.3 23.11 23.11 3.535 4 1 1 0 824.3652 2391.1109 S1195s TMT10 1184 (R) EQSSEAAETGVsENEENPVR (I) EQS(0.0)S(0.0)EAAET(0.0)GVS(0.99)ENEENPVR s:Phosphorylated S PDS5A 152367.9 4 2 1024.1 187.11 HUMAN 1 7.7495 10.972 EAAGAERSPCPEAAA-p Q7Z2K8;S776-p EAAGAERSPCPEAAA 0.123350251698765 0.0201753847281846 -0.310333333333333 -0.393 18.9181037226029 23.2179497807451 -0.310333333333333 -0.393 0.0128289061405169 0.00476655953647277 -3.65051435426445 -4.60092415666094 Q7Z2K8 GPRIN1 Q7Z2K8.S776.p_GPRIN1 Q7Z2K8_S776s _1_1_776_776 Q7Z2K8 Q7Z2K8 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11724.11724.3 19.8 19.8 99 1 1 1 0 875.7507 2545.2667 S776s TMT10 767 (K) DLEAAGAERsPCPEAAAPPPGPR (T) DLEAAGAERS(1.0)PCPEAAAPPPGPR C:Carbamidomethylation,s:Phosphorylated S GPRIN1 103196.3 1 22 292.1 381.4 HUMAN 1 -18.9181 -23.2179 EAAGPAPSPMRAANR-p Q12834;S41-p EAAGPAPSPMRAANR 0.137255352210019 0.00187522448824152 0.756666666666667 -1.348 17.6977365669143 42.8591508991842 0.756666666666667 -1.348 0.0169912896481694 5.17708040547117e-05 3.40134930299451 -11.4952481133451 Q12834 CDC20 Q12834.S41.p_CDC20 Q12834_S41s _1_1_41_41 Q12834 Q12834 Cell division cycle protein 20 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8055.8055.2 12.49 12.49 99 1 1 1 0 696.8312 1312.6881 S41s TMT10 34 (K) EAAGPAPsPMR (A) EAAGPAPS(1.0)PMR s:Phosphorylated S CDC20 55121 3 1 2388.1 85.57 HUMAN 1 17.6977 -42.8592 EAAGSFNSDDDAESC-p Q9P1Y6;S101-p EAAGSFNSDDDAESC 0.181904475638205 0.246963774232106 0.232333333333333 -0.198 14.5724050425848 8.0027162332705 0.232333333333333 -0.198 0.0348947021550101 0.158390225339839 2.7986334421708 -1.63511335124634 Q9P1Y6 PHRF1 Q9P1Y6.S101.p_PHRF1 Q9P1Y6_S101s _1_1_101_101 Q9P1Y6 Q9P1Y6|Q9P1Y6-3|A0A0J9YWD5|A0A0J9YYB5|F8WEF5 PHD and RING finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27329.27329.3 24.02 24.02 2.997 3 1 1 0 990.0965 2888.3028 S101s TMT10 93 (K) LEAAGSFNsDDDAESCPICLNAFR (D) LEAAGS(0.0)FNS(0.99)DDDAES(0.0)CPICLNAFR C:Carbamidomethylation,s:Phosphorylated S PHRF1 180374.6 2 2 438.1 312.23 HUMAN 1 14.5724 -8.0027 EAAKEAETPQAKKIK-p Q14978-3;T598-p EAAKEAETPQAKKIK 0.202779372132916 0.00504424682289455 0.263 -0.87 13.4455516316254 33.4891795390758 0.263 -0.87 0.0452319006084278 0.000447797893317274 2.59167147425119 -7.55424006500925 Q14978 NOLC1 Q14978.3.T598.p_NOLC1 Q14978-3_T598t _1_1_598_598 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6660.6660.4 11.03 6.28 99 1 1 1 0 660.6204 2559.4912 T598t TMT10 589 (K) QNEAAKEAEtPQAKK (I) QNEAAKEAET(1.0)PQAKK K:TMT10,t:Phosphorylated T NOLC1 73744 3 17 72.1 655.55 HUMAN 1 13.4456 -33.4892 EAAKNKKSPEIHRRI-p Q9Y2W1;S672-p EAAKNKKSPEIHRRI 0.443953440113018 0.0121510152711291 0.108666666666667 0.392 6.49863763174367 26.7515469509404 0.108666666666667 0.392 0.223942352857627 0.00211273635202369 1.37293420651787 5.49401990939811 Q9Y2W1 THRAP3 Q9Y2W1.S672.p_THRAP3 Q9Y2W1_S672s _1_1_672_672 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3125.3125.4 12.64 12.64 99 1 1 1 0 412.4838 1566.948 S672s Hydrogen 669 (K) NKKsPEIHR (R) NKKS(1.0)PEIHR K:TMT10-Lys-Only,s:Phosphorylated S THRAP3 108720.9 46 80 10.2 1293.04 HUMAN 1 6.4986 26.7515 EAALPPVSPLKAALS-p Q04637-9;S1238-p EAALPPVSPLKAALS 0.0948977079702483 0.00300551665934208 -0.449333333333333 -1.039 21.7028418258534 37.8887320553745 -0.449333333333333 -1.039 0.00675640722108418 0.000162602341218723 -4.2543056026678 -9.22111476391473 Q04637 EIF4G1 Q04637.9.S1238.p_EIF4G1 Q04637-9_S1238s _1_1_1238_1238 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1|Q04637-4|E7EX73|Q04637-5|Q04637-7|Q04637-6 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16857.17268.3 19.34 19.34 99 1 1 1 0 606.0215 1736.0835 S1238s TMT10 1230 (K) REAALPPVsPLK (A) REAALPPVS(1.0)PLK K:TMT10,s:Phosphorylated S EIF4G1 176975.4 23 29 107.1 585.61 HUMAN 1 -21.7028 -37.8887 EAAQNGQSPMAALIL-p Q7Z5L9;S423-p EAAQNGQSPMAALIL 0.949355669265611 0.701428458931845 0.0106666666666667 -0.0376666666666666 0.446889169058243 2.11706579478431 0.0106666666666667 -0.0376666666666666 0.902217160114051 0.614176818674352 0.128734604596299 -0.534510389614268 Q7Z5L9 IRF2BP2 Q7Z5L9.S423.p_IRF2BP2 Q7Z5L9_S423s _1_1_423_423 Q7Z5L9 Q7Z5L9|Q7Z5L9-2 Interferon regulatory factor 2-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28410.28410.4 27.54 27.54 12.507 5 1 1 0 886.4492 3462.8051 S423s TMT10 412 (R) TTPPEAAQNGQsPMAALILVADNAGGSHASK (D) T(0.0)T(0.0)PPEAAQNGQS(0.99)PMAALILVADNAGGS(0.0)HAS(0.0)K K:TMT10,s:Phosphorylated S IRF2BP2 61765.3 6 11 154.1 504.92 HUMAN 1 0.4469 -2.1171 EAASSRGSPVRVKRE-p Q53GS9;S46-p EAASSRGSPVRVKRE 0.623627515713218 0.0184205042935803 0.0656666666666667 0.386333333333333 3.81066608238633 23.8724278322978 0.0656666666666667 0.386333333333333 0.415846826702077 0.0040997485106358 0.88076073935873 4.75815735899393 Q53GS9 USP39 Q53GS9.S46.p_USP39 Q53GS9_S46s _1_1_46_46 Q53GS9 Q53GS9|B9A018|Q53GS9-3|F8WC91 U4/U6.U5 tri-snRNP-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.2944.2944.4 14.77 14.77 2.671 3 1 1 0 495.482 1898.9427 S46s Hydrogen 33 (R) DREREPEAASSRGsPVR (V) DREREPEAAS(0.0)S(0.0)RGS(0.99)PVR s:Phosphorylated S USP39 65778.7 23 1 1444.1 141.55 HUMAN 1 3.8107 23.8724 EAATPRDSPRPGKPD-p Q9Y5B0;S395-p EAATPRDSPRPGKPD 0.807313814085276 0.160822297671947 0.047 0.381666666666667 1.78886990527474 10.4372759260569 0.047 0.381666666666667 0.662388844080297 0.0904216457706685 0.461520945259 2.05692018501247 Q9Y5B0 CTDP1 Q9Y5B0.S395.p_CTDP1 Q9Y5B0_S395s _1_1_395_395 Q9Y5B0 Q9Y5B0|Q9Y5B0-4|A0A0A0MR03 RNA polymerase II subunit A C-terminal domain phosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6590.6590.5 15.86 12.28 1.105 3 1 1 0 584.2973 2837.4906 S395s TMT10 383 (R) ELNGSEAATPRDsPRPGKPDER (D) ELNGS(0.0)EAAT(0.0)PRDS(0.99)PRPGKPDER K:TMT10,s:Phosphorylated S CTDP1 105367.3 2 1 1257.1 161.48 HUMAN 1 1.7889 10.4373 EACILPHSPINVDKR-p O95714;S1588-p EACILPHSPINVDKR 0.156450973477083 0.571891978952572 -0.493666666666667 0.0846666666666667 16.1613319827351 3.27107588652455 -0.493666666666667 0.0846666666666667 0.0242028663011392 0.470860664680082 -3.09922930263143 0.774838508941604 O95714 HERC2 O95714.S1588.p_HERC2 O95714_S1588s _1_1_1588_1588 O95714 O95714|Q9BVR0 E3 ubiquitin-protein ligase HERC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24449.24449.3 17.99 17.99 17.987 2 1 1 0 1039.849 3037.5552 S1588s TMT10 1572 (K) IGNEESDLEEACILPHsPINVDK (R) IGNEES(0.0)DLEEACILPHS(0.99)PINVDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HERC2 533836.7 2 4 552.1 274.16 HUMAN 1 -16.1613 3.2711 EACPLLGSPGAGRNS-p Q96F46;S708-p EACPLLGSPGAGRNS 0.795054081011152 0.136931115635617 0.067 -0.388 1.92457217124934 11.3783864773363 0.067 -0.388 0.642011463719308 0.07280502448544 0.492032447301255 -2.22149570333188 Q96F46 IL17RA Q96F46.S708.p_IL17RA Q96F46_S708s _1_1_708_708 Q96F46 Q96F46|Q96F46-2 Interleukin-17 receptor A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25267.25267.3 27.93 27.93 99 1 1 1 0 735.7027 2125.1273 S708s TMT10 694 (R) LALAGEGEACPLLGsPGAGR (N) LALAGEGEACPLLGS(1.0)PGAGR C:Carbamidomethylation,s:Phosphorylated S IL17RA 97547 2 2 3040.1 62.45 HUMAN 1 1.9246 -11.3784 EADEEDVSEEEAESK-p Q9H3N1;S247-p EADEEDVSEEEAESK 0.19531414741951 0.0153184387433832 0.498333333333333 -0.552666666666667 13.8312845572136 25.1049640808947 0.498333333333333 -0.552666666666667 0.0413877240008851 0.00308676517522417 2.66199400916455 -5.06405497146545 Q9H3N1 TMX1 Q9H3N1.S247.p_TMX1 Q9H3N1_S247s _1_1_247_247 Q9H3N1 Q9H3N1 Thioredoxin-related transmembrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22017.22017.4 29.88 27.1 6.255 4 1 1 0 1126.0668 4421.2753 S247s TMT10 224 (K) LLSESAQPLKKVEEEQEADEEDVsEEEAESK (E) LLS(0.0)ES(0.0)AQPLKKVEEEQEADEEDVS(0.99)EEEAES(0.0)K K:TMT10,s:Phosphorylated S TMX1 32190 27 2 695.1 242.17 HUMAN 1 13.8313 -25.105 EADEEEETPPRQLLQ-p O60347;T64-p EADEEEETPPRQLLQ 0.935639612633019 0.204738946337175 0.017 0.148666666666667 0.565925500253586 9.06194927881984 0.017 0.148666666666667 0.877823999086081 0.124109513186037 0.161146070831279 1.81842821460979 O60347 TBC1D12 O60347.T64.p_TBC1D12 O60347_T64t _1_1_64_64 O60347 O60347 TBC1 domain family member 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20881.20881.4 20.28 19.72 20.272 2 1 1 0 1084.2388 4253.9796 T64t TMT10 35 (R) ATGGFGGGVGAVEPPEEADEEEEADEEEEtPPRQLLQR (Y) AT(0.0)GGFGGGVGAVEPPEEADEEEEADEEEET(0.99)PPRQLLQR t:Phosphorylated T TBC1D12 86422.8 1 1 2018.1 102.13 HUMAN 1 0.5659 9.0619 EADENYNSVNTRMRK-p Q12846;S117-p EADENYNSVNTRMRK 0.433984623040525 0.812767301100662 -0.117666666666667 0.0253333333333334 6.68097194365827 1.26030087202041 -0.117666666666667 0.0253333333333334 0.214734984711006 0.748117670363317 -1.40504515105126 0.337920750557325 Q12846 STX4 Q12846.S117.p_STX4 Q12846_S117s _1_1_117_117 Q12846 Q12846|Q12846-2 Syntaxin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10637.10848.3 15.92 15.92 1.194 3 1 1 0 915.7771 2665.347 S117s TMT10 103 (K) AIEPQKEEADENYNsVNTR (M) AIEPQKEEADENY(0.0)NS(0.99)VNT(0.0)R K:TMT10,s:Phosphorylated S STX4 34293.4 2 2 1970.1 104.86 HUMAN 1 -6.681 1.2603 EADGAPKSVNGSVAE-p Q02040;S511-p EADGAPKSVNGSVAE 0.201774620661792 0.00995494320820516 -0.301333333333333 0.456 13.5001174352503 28.1320595629599 -0.301333333333333 0.456 0.0446671513781929 0.00153742537124513 -2.60158803876372 5.8747682866608 Q02040 AKAP17A Q02040.S511.p_AKAP17A Q02040_S511s _1_1_511_511 Q02040 Q02040 A-kinase anchor protein 17A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12048.12048.3 12.08 12.08 2.159 2 1 1 0 629.3106 1805.9468 S511s TMT10 511 (K) sVNGSVAEEAPCK (E) S(0.99)VNGS(0.0)VAEEAPCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AKAP17A 81361.6 1 1 1803.1 114.1 HUMAN 1 -13.5001 28.1321 EADGPKASPEARPQI-p Q8N3F8;S273-p EADGPKASPEARPQI 0.197355062843301 0.325511214091535 -0.311 0.106666666666667 13.7390310505436 6.45049582985398 -0.311 0.106666666666667 0.0422762925897684 0.22643857700784 -2.64512793342491 1.36409158721048 Q8N3F8 MICALL1 Q8N3F8.S273.p_MICALL1 Q8N3F8_S273s _1_1_273_273 Q8N3F8 Q8N3F8 MICAL-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12435.12435.5 24.06 18.93 4.097 5 1 1 0 824.8346 4040.1768 S273s TMT10 251 (K) DVPGGGPSSSAPAGAEADGPKAsPEARPQIPTKPR (V) DVPGGGPS(0.0)S(0.0)S(0.0)APAGAEADGPKAS(0.99)PEARPQIPT(0.0)KPR K:TMT10,s:Phosphorylated S MICALL1 94409.4 4 2 755.1 231.25 HUMAN 1 -13.739 6.4505 EADGVDRSFGEKRYE-p G3V1L9;S1413-p EADGVDRSFGEKRYE 0.280460822849252 0.0086777312522388 -0.178 -0.581666666666667 10.4350394739575 29.2462309202503 -0.178 -0.581666666666667 0.0904682214849951 0.00118953413188168 -2.0574035656743 -6.19652732683275 G3V1L9 TJP1 G3V1L9.S1413.p_TJP1 G3V1L9_S1413s _1_1_1413_1413 G3V1L9 G3V1L9|Q07157|G5E9E7 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10769.10769.3 14.1 8.93 99 1 1 1 0 819.4314 2376.3126 S1413s TMT10 1402 (K) GKPPEADGVDRsFGEK (R) GKPPEADGVDRS(1.0)FGEK K:TMT10,s:Phosphorylated S TJP1 197797.8 3 58 41.2 827.72 HUMAN 1 -10.435 -29.2462 EADSSSGSPTSIDKI-p P20265;S341-p EADSSSGSPTSIDKI 0.765494946141546 0.194128235559023 -0.0506666666666667 -0.142666666666667 2.22913770679193 9.36128125432528 -0.0506666666666667 -0.142666666666667 0.59853042168731 0.115843554441751 -0.558968827728478 -1.87022002410059 P20265 POU3F2 P20265.S341.p_POU3F2 P20265_S341s _1_1_341_341 P20265 P20265|P20265-2|P20265-3 POU domain, class 3, transcription factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21710.21710.3 17.21 17.21 1.123 6 1 1 0 783.043 2267.1443 S341s TMT10 331 (K) WLEEADSSSGsPTSIDK (I) WLEEADS(0.0)S(0.0)S(0.0)GS(0.99)PT(0.0)S(0.0)IDK K:TMT10,s:Phosphorylated S POU3F2 47120.1 1 1 4796.1 26.49 HUMAN 1 -2.2291 -9.3613 EADTANMSDKELKKL-p Q9BXJ9;S588-p EADTANMSDKELKKL 0.0608497647854506 0.0194108496572423 -0.573 0.498 26.5627251099383 23.5153955269766 -0.573 0.498 0.00220661968934531 0.00445102924014337 -5.4507697059312 4.67194949722412 Q9BXJ9 NAA15 Q9BXJ9.S588.p_NAA15 Q9BXJ9_S588s _1_1_588_588 Q9BXJ9 Q9BXJ9 N-alpha-acetyltransferase 15, NatA auxiliary subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12368.12368.4 19.12 19.12 2.564 3 1 1 0 848.6583 3311.6417 S588s TMT10 568 (K) LHDNPLTDENKEHEADTANMsDK (E) LHDNPLT(0.0)DENKEHEADT(0.0)ANMS(0.99)DK K:TMT10,s:Phosphorylated S NAA15 102525.8 2 3 2350.1 87.07 HUMAN 1 -26.5627 23.5154 EAEAEASSPKGKFSL-p Q09666;S5763-p EAEAEASSPKGKFSL 0.233121410286087 0.00959379043439972 0.339 -0.521666666666667 12.1517896018792 28.4571245365601 0.339 -0.521666666666667 0.060928577646759 0.00142655180082859 2.35928708644016 -5.96726922239411 Q09666 AHNAK Q09666.S5763.p_AHNAK Q09666_S5752sS5763s_2_2_5752_5763 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21531.21734.4 13.09 13.09 1.107 4 2 2 0 692.0967 2605.4288 S5752s S5763s TMT10 5748 (K) ASLGsLEGEAEAEASsPKGK (F) AS(0.0)LGS(0.99)LEGEAEAEAS(0.0)S(0.99)PKGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 10 182 1.1 4313.36 HUMAN 1 12.1518 -28.4571 EAEDIFDSDKEVPIE-p Q96JQ2;S301-p EAEDIFDSDKEVPIE 0.891849147105837 0.573020668912008 -0.0316666666666667 0.134333333333333 0.97212492442814 3.26009904032782 -0.0316666666666667 0.134333333333333 0.799443006281372 0.472052276046161 -0.266871567954034 0.772649915754254 Q96JQ2 CLMN Q96JQ2.S301.p_CLMN Q96JQ2_S301s _1_1_301_301 Q96JQ2 Q96JQ2 Calmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33624.33624.4 18.09 18.09 9.858 3 1 1 0 838.4145 3270.6822 S301s TMT10 290 (R) FPELEAEDIFDsDKEVPIESTFVR (I) FPELEAEDIFDS(0.99)DKEVPIES(0.0)T(0.0)FVR K:TMT10,s:Phosphorylated S CLMN 112105.2 4 3 726.1 236.61 HUMAN 1 -0.9721 3.2601 EAEEGRNSLSPVQAT-p E9PDI4;S135-p EAEEGRNSLSPVQAT 0.980875401833083 0.134182360081184 0.00699999999999999 -0.268333333333333 0.166322710312094 11.4967444928212 0.00699999999999999 -0.268333333333333 0.962426846505664 0.0708476665322015 0.0493288314641832 -2.24231159472054 E9PDI4 NotFound E9PDI4.S135.p_NotFound E9PDI4_S135sS137s_2_2_135_137 E9PDI4 E9PDI4|O00515 Ladinin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15250.15250.4 9.62 7.69 9.625 4 2 2 0 864.9653 3296.9145 S135s S137s Hydrogen 127 (R) LEAEEGRNsLsPVQATQKPLVSKK (E) LEAEEGRNS(0.99)LS(0.99)PVQAT(0.0)QKPLVS(0.0)KK K:TMT10-Lys-Only,s:Phosphorylated S LAD1 58791 2 10 769.1 228.41 HUMAN 1 0.1663 -11.4967 EAEERCLSPDDSTVK-p E9PGC8;S1224-p EAEERCLSPDDSTVK 0.43508014991783 0.915319001258995 -0.111 0.019 6.65325451950198 0.540123178752418 -0.111 0.019 0.216109843107903 0.88305485401748 -1.40017002171386 0.154165887833474 E9PGC8 NotFound E9PGC8.S1224.p_NotFound E9PGC8_S1224s _1_1_1224_1224 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20552.20552.5 23.01 23.01 1.839 7 1 1 0 964.4692 4738.3282 S1224s TMT10 1192 (K) LCSQYGTPVFSAPGHALHPGEPALGEAEERCLsPDDSTVK (M) LCS(0.0)QY(0.0)GT(0.0)PVFS(0.0)APGHALHPGEPALGEAEERCLS(0.99)PDDS(0.0)T(0.0)VK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP1A 332906.7 10 17 20.1 1016.98 HUMAN 1 -6.6533 0.5401 EAEERRHSLENKVKR-p O14578-4;S699-p EAEERRHSLENKVKR 0.726261487694244 0.527670191227043 0.071 -0.152666666666667 2.63465187979797 3.73198535151722 0.071 -0.152666666666667 0.54517359376552 0.423449344435102 0.645176249590009 -0.865399160043614 O14578 CIT O14578.4.S699.p_CIT O14578-4_S699s _1_1_699_699 O14578-4 O14578-4 Isoform 4 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8033.8033.5 11.74 11.74 99 1 1 1 0 521.8953 2525.4767 S699s TMT10 689 (K) KLVEAEERRHsLENK (V) KLVEAEERRHS(1.0)LENK K:TMT10,s:Phosphorylated S CIT 238656.7 5 11 366.1 342.11 HUMAN 1 2.6347 -3.732 EAEFNSPSPPTPEPG-p A0MZ66-3;S534-p EAEFNSPSPPTPEPG 0.272868302810421 0.0638762053432735 0.206333333333333 0.216333333333333 10.6852225403043 15.905093879993 0.206333333333333 0.216333333333333 0.0854039083798454 0.0256738270924856 2.101050012604 3.04785066289664 A0MZ66 SHTN1 A0MZ66.3.S534.p_SHTN1 A0MZ66-3_S534s _1_1_534_534 A0MZ66-3 A0MZ66-3|A0MZ66-6|A0MZ66-5|A0MZ66-4 Isoform 3 of Shootin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19361.19564.3 17.32 17.32 1.879 4 1 1 0 840.062 2438.2037 S534s TMT10 525 (K) TLEAEFNSPsPPTPEPGEGPR (K) T(0.0)LEAEFNS(0.0)PS(0.99)PPT(0.0)PEPGEGPR s:Phosphorylated S SHTN1 74064.4 4 10 838.1 214.92 HUMAN 1 10.6852 15.9051 EAEFQSLTPSQIKSM-p Q9H425;T211-p EAEFQSLTPSQIKSM 0.599899346906848 0.132939760585225 0.0773333333333333 -0.159333333333333 4.09893269141969 11.5503677307953 0.0773333333333333 -0.159333333333333 0.389140767265765 0.0699782740688352 0.935994048314286 -2.25175232464745 Q9H425 C1orf198 Q9H425.T211.p_C1orf198 Q9H425_T211t _1_1_211_211 Q9H425 Q9H425|Q9H425-3|Q9H425-2 Uncharacterized protein C1orf198 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18438.18438.3 19.86 19.86 3.31 4 1 1 0 867.1108 2519.3506 T211t TMT10 198 (R) SRGEGPEAEFQSLtPSQIK (S) S(0.0)RGEGPEAEFQS(0.0)LT(0.99)PS(0.0)QIK K:TMT10,t:Phosphorylated T C1orf198 36459.9 3 7 1196.1 167.35 HUMAN 1 4.0989 -11.5504 EAEGAPGSPEREPPA-p Q9HCE9;S669-p EAEGAPGSPEREPPA 0.831846485883834 0.80683939592906 0.0306666666666667 -0.0246666666666667 1.54150162242139 1.3046123161672 0.0306666666666667 -0.0246666666666667 0.701212804220818 0.740523369171397 0.404687424853264 -0.348597640217388 Q9HCE9 ANO8 Q9HCE9.S669.p_ANO8 Q9HCE9_S669s _1_1_669_669 Q9HCE9 Q9HCE9|Q9HCE9-2 Anoctamin-8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27749.27749.4 14.71 14.71 2.466 2 1 1 0 990.9866 3880.9555 S669s TMT10 648 (K) GLEPGVFTLAEEDDEAEGAPGsPEREPPAILFRR (A) GLEPGVFT(0.0)LAEEDDEAEGAPGS(0.99)PEREPPAILFRR s:Phosphorylated S ANO8 137286.9 2 2 2885.1 66.96 HUMAN 1 1.5415 -1.3046 EAEGFPATV______-p P03372;T594-p EAEGFPATV______ 0.287132448838618 0.0112860651500535 0.205 0.449333333333333 10.2209478994252 27.2700261184639 0.205 0.449333333333333 0.0950397335480623 0.00187498323188703 2.02012415293344 5.63476840133412 P03372 ESR1 P03372.T594.p_ESR1 P03372_T594t _1_1_594_594 P03372 P03372|P03372-2|P03372-3|Q9H2M1 Estrogen receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27863.27863.2 15.35 15.35 11.893 4 1 1 0 913.925 1746.8788 T594t TMT10 582 (K) YYITGEAEGFPAtV (-) Y(0.0)Y(0.0)IT(0.0)GEAEGFPAT(0.99)V t:Phosphorylated T ESR1 66956.6 1 2 3925.1 40.59 HUMAN 1 10.2209 27.27 EAEGGLISPVWGAEG-p Q76N32;S53-p EAEGGLISPVWGAEG 0.107015162488299 0.444344653426518 0.317666666666667 0.105333333333333 20.425985200545 4.69056973655689 0.317666666666667 0.105333333333333 0.00906570285053054 0.3395807211973 3.97097366872292 1.04683493615741 Q76N32 CEP68 Q76N32.S53.p_CEP68 Q76N32_S53s _1_1_53_53 Q76N32 Q76N32|Q76N32-2 Centrosomal protein of 68 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36468.36468.5 9.91 9.91 9.914 5 1 1 0 1052.9116 5180.5659 S53s TMT10 30 (R) ELDIPGPMSGEQPPRLEAEGGLIsPVWGAEGIPAPTCWIGTDPGGPSR (A) ELDIPGPMS(0.0)GEQPPRLEAEGGLIS(0.99)PVWGAEGIPAPT(0.0)CWIGT(0.0)DPGGPS(0.0)R C:Carbamidomethylation,s:Phosphorylated S CEP68 82013.7 1 1 2056.1 100.31 HUMAN 1 20.426 4.6906 EAEGPRQSPEKSHMV-p Q96L94;S19-p EAEGPRQSPEKSHMV 0.768966469812523 0.0705887157471207 0.045 -0.316666666666667 2.18903525717232 15.3061289328018 0.045 -0.316666666666667 0.604082805575509 0.0294704730273883 0.550269890209197 -2.93410279261967 Q96L94 SNX22 Q96L94.S19.p_SNX22 Q96L94_S19s _1_1_19_19 Q96L94 Q96L94|Q96L94-2 Sorting nexin-22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20610.20610.4 11.12 11.12 1.753 2 1 1 0 732.1299 2845.5282 S19s TMT10 1 (-) MLEVHIPSVGPEAEGPRQsPEK (S) MLEVHIPS(0.0)VGPEAEGPRQS(0.99)PEK K:TMT10,s:Phosphorylated S SNX22 22239.1 3 1 6533.1 11.12 HUMAN 1 2.189 -15.3061 EAEIIKDSPDSPEPP-p Q9NVM9;S623-p EAEIIKDSPDSPEPP 0.663605400627931 0.0121567318783698 0.0653333333333333 0.545666666666667 3.3315730484912 26.7434593466002 0.0653333333333333 0.545666666666667 0.464347054633792 0.00211667443926774 0.786990178860081 5.49184533794624 Q9NVM9 ASUN Q9NVM9.S623.p_ASUN Q9NVM9_S623sS626s_2_2_623_626 Q9NVM9 Q9NVM9 Integrator complex subunit 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22494.22494.5 17.03 17.03 5.488 3 2 2 0 1131.1968 5492.0309 S623s S626s TMT10 610 (R) GKEELAEAEIIKDsPDsPEPPNKKPLVEMDETPQVEK (S) GKEELAEAEIIKDS(0.99)PDS(0.99)PEPPNKKPLVEMDET(0.0)PQVEK K:TMT10,s:Phosphorylated S INTS13 81193.5 2 2 3625.1 46.67 HUMAN 1 3.3316 26.7435 EAEKAQQSYERLDND-p S4R347;S153-p EAEKAQQSYERLDND 0.126572282263763 0.873640236183979 0.402 -0.0216666666666666 18.6232662107331 0.8261260947086 0.402 -0.0216666666666666 0.0137300898388814 0.826775103867147 3.58951914356924 -0.229654581009457 S4R347 NotFound S4R347.S153.p_NotFound S4R347_S153s _1_1_153_153 S4R347 S4R347|Q5T0N5|Q5T0N5-5|Q5T0N5-2 Formin-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12260.12260.4 14.61 14.61 5.96 4 1 1 0 791.6522 3083.6212 S153s TMT10 150 (K) AQQsYERLDNDTNATKADVEK (A) AQQS(0.99)Y(0.0)ERLDNDT(0.0)NAT(0.0)KADVEK K:TMT10,s:Phosphorylated S FNBP1L 70981.3 1 2 1067.1 181.01 HUMAN 1 18.6233 -0.8261 EAEKKAFSENLDPED-p Q49MG5;S230-p EAEKKAFSENLDPED 0.187401879653763 0.427028106063986 0.227 0.0756666666666667 14.2722736124022 4.91935137878663 0.224373955232005 0.0756666666666667 0.0373914785677344 0.32215498956166 2.7430468119323 1.08904078168279 Q49MG5 MAP9 Q49MG5.S230.p_MAP9 Q49MG5_S230s _1_1_230_230 Q49MG5 Q49MG5|E7ETZ8|Q49MG5-2|A0A0C4DG83 Microtubule-associated protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29812.29812.3 11.35 11.35 2 7 1 1 0 970.4641 2829.4228 S230s TMT10 228 (K) AFsENLDPEDSCLTSLASSSLK (Q) AFS(0.99)ENLDPEDS(0.0)CLT(0.0)S(0.0)LAS(0.0)S(0.0)S(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP9 74403.8 1 5 1396.1 146.8 HUMAN 1 14.2723 4.9194 EAEKVVESPDFSKDE-p Q9Y6Y8;S926-p EAEKVVESPDFSKDE 0.24482607858079 0.456261450782012 -0.601 0.0743333333333333 11.6878417904759 4.54420623776864 -0.601 0.0743333333333333 0.067797834260784 0.351220111328597 -2.2770856732455 1.01963672909883 Q9Y6Y8 SEC23IP Q9Y6Y8.S926.p_SEC23IP Q9Y6Y8_S926s _1_1_926_926 Q9Y6Y8 Q9Y6Y8 SEC23-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21202.21202.4 19.77 19.77 4.465 3 1 1 0 649.5849 2515.3535 S926s TMT10 923 (K) VVEsPDFSKDEDYLGK (V) VVES(0.99)PDFS(0.0)KDEDY(0.0)LGK K:TMT10,s:Phosphorylated S SEC23IP 111759.1 3 6 1985.1 104.07 HUMAN 1 -11.6878 4.5442 EAENEFLSLDDFPDS-p Q6IBW4-4;S120-p EAENEFLSLDDFPDS 0.52638025599558 0.78096640840279 0.0866666666666667 -0.0303333333333333 5.15663933530937 1.48577046228116 0.0866666666666667 -0.0303333333333333 0.305025442950834 0.710269153173599 1.13268712677704 -0.391609048294574 Q6IBW4 NCAPH2 Q6IBW4.4.S120.p_NCAPH2 Q6IBW4-4_S120s _1_1_120_120 Q6IBW4-4 Q6IBW4-4|A0A0A6YYG7|Q6IBW4-2 Isoform 4 of Condensin-2 complex subunit H2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28035.28035.3 17.29 17.29 5.429 4 1 1 0 1054.1479 3080.4646 S120s TMT10 102 (R) ANGVASSGVPQEAENEFLsLDDFPDSR (T) ANGVAS(0.0)S(0.0)GVPQEAENEFLS(0.99)LDDFPDS(0.0)R s:Phosphorylated S NCAPH2 68752.9 1 1 1022.1 187.64 HUMAN 1 5.1566 -1.4858 EAEPLPASPEAPAHS-p A7MBM2;S1263-p EAEPLPASPEAPAHS 0.523729620660367 0.253501648746385 0.0846666666666667 0.161666666666667 5.19624666386667 7.85052445575196 0.0846666666666667 0.161666666666667 0.302256280431342 0.164039166688482 1.13990274362601 1.60871957387978 A7MBM2 DISP2 A7MBM2.S1263.p_DISP2 A7MBM2_S1252sS1263sS1270s_3_3_1252_1270 A7MBM2 A7MBM2 Protein dispatched homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12891.12891.3 9.17 9.17 99 3 3 3 0 947.7257 2601.263 S1252s S1263s S1270s Hydrogen 1250 (R) QDsQGEEAEPLPAsPEAPAHsPK (A) QDS(1.0)QGEEAEPLPAS(1.0)PEAPAHS(1.0)PK K:TMT10-Lys-Only,s:Phosphorylated S DISP2 154339.7 1 5 2793.1 70.42 HUMAN 1 5.1962 7.8505 EAERKNISQELNMEQ-p A0A0U1RRH6;S936-p EAERKNISQELNMEQ 0.790053523868569 0.359572875001513 -0.0766666666666666 0.126666666666667 1.97396110680198 5.89319340988254 -0.0766666666666667 0.126666666666667 0.634751724319838 0.257442745912274 -0.503027788211618 1.26521745395814 A0A0U1RRH6 NotFound A0A0U1RRH6.S936.p_NotFound A0A0U1RRH6_S936s _1_1_936_936 A0A0U1RRH6 A0A0U1RRH6|O94880-2 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18130.18130.3 9.1 9.1 99 1 1 1 0 624.6486 1791.9675 S936s TMT10 934 (K) NIsQELNMEQK (N) NIS(1.0)QELNMEQK K:TMT10,s:Phosphorylated S PHF14 109152.4 1 20 126.1 543.2 HUMAN 1 -1.974 5.8932 EAERPDGSEDAEDDD-p O14787;S355-p EAERPDGSEDAEDDD 0.716766307880446 0.0194744971299651 0.0553333333333333 0.363666666666667 2.72801991949593 23.4886597840152 0.0553333333333333 0.363666666666667 0.533578114513198 0.00447851488091943 0.664607154979957 4.66553608803626 O14787 TNPO2 O14787.S355.p_TNPO2 O14787_S355s _1_1_355_355 O14787 O14787|O14787-2|A0A075B780 Transportin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19559.19559.5 19.82 19.82 7.919 4 1 1 0 853.7886 4184.9533 S355s TMT10 342 (R) TVTLPHEAERPDGsEDAEDDDDDDALSDWNLRK (C) T(0.0)VT(0.0)LPHEAERPDGS(0.99)EDAEDDDDDDALS(0.0)DWNLRK K:TMT10,s:Phosphorylated S TNPO2 102926.8 2 2 4423.1 31.66 HUMAN 1 2.728 23.4887 EAERSLMSSPEDLTK-p P46821;S831-p EAERSLMSSPEDLTK 0.223866185094493 0.391328025586145 0.185 -0.131 12.4886120602546 5.41770030794438 0.185 -0.131 0.0563817814717049 0.287230113082643 2.41931281913337 -1.17982730981962 P46821 MAP1B P46821.S831.p_MAP1B P46821_S831sS832s_2_2_831_832 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.36325.36325.4 11.67 11.67 3.367 5 2 2 0 979.994 3757.0275 S831s S832s TMT10 828 (R) SLMssPEDLTKDFEELKAEEVDVTK (D) S(0.0)LMS(0.99)S(0.99)PEDLT(0.0)KDFEELKAEEVDVT(0.0)K K:TMT10,s:Phosphorylated S MAP1B 271827.6 2 26 210.1 442.48 HUMAN 1 12.4886 -5.4177 EAETDSDSD______-p O75643;S2135-p EAETDSDSD______ 0.16127524660131 0.00287323999157205 -0.311 -0.667333333333333 15.8693586869003 38.4318254877937 -0.311 -0.667333333333333 0.0258859513907626 0.000143488617499124 -3.04314577622222 -9.4479084689159 O75643 SNRNP200 O75643.S2135.p_SNRNP200 O75643_S2135s _1_1_2135_2135 O75643 O75643|O75643-2 U5 small nuclear ribonucleoprotein 200 kDa helicase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19179.19179.2 12.86 12.86 1.152 4 1 1 0 1091.4912 2102.0177 S2135s TMT10 2122 (K) FSVDVKEAETDSDsD (-) FS(0.0)VDVKEAET(0.0)DS(0.0)DS(0.99)D K:TMT10,s:Phosphorylated S SNRNP200 246157.8 1 8 2427.1 83.94 HUMAN 1 -15.8694 -38.4318 EAFKPILSTRSLKGL-p O95456;S255-p EAFKPILSTRSLKGL 0.842179784254459 0.144320902498158 -0.055 0.19 1.44301755466103 11.0736903025559 -0.055 0.19 0.717295728362555 0.0780963919122922 -0.381588339552155 2.16803930595671 O95456 PSMG1 O95456.S255.p_PSMG1 O95456_S255s _1_1_255_255 O95456 O95456 Proteasome assembly chaperone 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.35062.35062.3 15.5 15.5 1.313 3 1 1 0 785.4544 2274.3837 S255s TMT10 242 (K) LDLITVEAFKPILsTR (S) LDLIT(0.0)VEAFKPILS(0.99)T(0.0)R K:TMT10,s:Phosphorylated S PSMG1 33652.1 1 3 3489.1 49.83 HUMAN 1 -1.443 11.0737 EAFKQRHSYPERLVR-p Q14C86-6;S919-p EAFKQRHSYPERLVR 0.0898915602568078 0.0244901569534679 -0.399333333333333 -0.475333333333333 22.2786451757665 21.9330066860855 -0.399333333333333 -0.475333333333333 0.00591746206417568 0.0064076581117172 -4.38594085563589 -4.30209496159664 Q14C86 GAPVD1 Q14C86.6.S919.p_GAPVD1 Q14C86-6_S919s_1_1_919_919 Q14C86-6 Q14C86-6|Q14C86-2|Q14C86-5|Q14C86-4|Q14C86-3|F8W9S7 Isoform 6 of GTPase-activating protein and VPS9 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.2967.2967.3 12.66 12.66 1.473 2 1 1 0 379.1606 1072.5283 Q916q S919s Hydrogen 916 (K) qRHsYPER (L) Q(1.0)RHS(0.99)Y(0.0)PER q:Pyroglutamic acid,s:Phosphorylated S GAPVD1 167648.8 2 11 268.1 394.98 HUMAN 1 -22.2786 -21.933 EAFVELESEDEVKLA-p G8JLB6;S63-p EAFVELESEDEVKLA 0.763769448219998 0.37615673533167 -0.0533333333333333 0.0843333333333333 2.24455921298672 5.63820374268377 -0.0533333333333334 0.0843333333333333 0.596408849255013 0.273010673111004 -0.562305216747142 1.21955966170998 G8JLB6 HNRNPH1 G8JLB6.S63.p_HNRNPH1 G8JLB6_S63s _1_1_63_63 G8JLB6 G8JLB6 Heterogeneous nuclear ribonucleoprotein H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17990.17990.3 19.36 19.36 10.226 2 1 1 0 882.4308 2565.3084 S63s TMT10 50 (R) EGRPSGEAFVELEsEDEVK (L) EGRPS(0.0)GEAFVELES(0.99)EDEVK K:TMT10,s:Phosphorylated S HNRNPH1 51514.2 4 3 990.2 191.56 HUMAN 1 -2.2446 5.6382 EAFVELESEEEVKLA-p P55795;S63-p EAFVELESEEEVKLA 0.304950801606813 0.0114775574750586 -0.167666666666667 0.47 9.66579545508156 27.1515032732081 -0.167666666666667 0.47 0.10799917911433 0.0019268578323853 -1.92370163329679 5.60235915358583 P55795 HNRNPH2 P55795.S63.p_HNRNPH2 P55795_S63s _1_1_63_63 P55795 P55795 Heterogeneous nuclear ribonucleoprotein H2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18206.18206.3 19.55 13.92 18.68 2 1 1 0 887.1047 2579.3241 S63s TMT10 50 (R) EGRPSGEAFVELEsEEEVK (L) EGRPS(0.0)GEAFVELES(0.99)EEEVK K:TMT10,s:Phosphorylated S HNRNPH2 49548 1 18 990.3 191.56 HUMAN 1 -9.6658 27.1515 EAFVELGSEDDVKMA-p P52597;S63-p EAFVELGSEDDVKMA 0.929012369808418 0.287469928434739 -0.0136666666666667 0.102666666666667 0.634714601031327 7.14317172708935 -0.0136666666666667 0.102666666666667 0.864029438980856 0.19305578825138 -0.179561236832331 1.48563323382347 P52597 HNRNPF P52597.S63.p_HNRNPF P52597_S63s _1_1_63_63 P52597 P52597 Heterogeneous nuclear ribonucleoprotein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20795.20795.3 17.68 17.68 12.214 2 1 1 0 750.0308 2168.1123 S63s TMT10 53 (R) QSGEAFVELGsEDDVK (M) QS(0.0)GEAFVELGS(0.99)EDDVK K:TMT10,s:Phosphorylated S HNRNPF 46013.4 2 8 990.1 191.56 HUMAN 1 -0.6347 7.1432 EAGADKRSPRRASAA-p Q07617;S418-p EAGADKRSPRRASAA 0.234975861639753 0.00177043297676807 -0.189 -1.085 12.0567572533135 43.4426113891244 -0.189 -1.085 0.0622765111648734 4.5262533690675e-05 -2.34240577871306 -11.79369840688 Q07617 SPAG1 Q07617.S418.p_SPAG1 Q07617_S418s _1_1_418_418 Q07617 Q07617 Sperm-associated antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3485.3485.5 16.79 16.79 10.903 2 1 1 0 504.2678 2437.3424 S418s TMT10 402 (R) GAPQRGQTPEAGADKRsPR (R) GAPQRGQT(0.0)PEAGADKRS(0.99)PR K:TMT10,s:Phosphorylated S SPAG1 104777.7 4 1 1758.1 117.12 HUMAN 1 -12.0568 -43.4426 EAGAETRSPGKAEAE-p Q9GZR7-2;S232-p EAGAETRSPGKAEAE 0.865417944085973 0.987020281482734 0.0266666666666667 0.00333333333333335 1.22111575779877 0.0856367732225041 0.0266666666666667 0.00333333333333334 0.754898259779198 0.980474544199514 0.328458911599018 0.0256231446929235 Q9GZR7 DDX24 Q9GZR7.2.S232.p_DDX24 Q9GZR7-2_S232sS240s_2_2_232_240 Q9GZR7-2 Q9GZR7-2 Isoform 2 of ATP-dependent RNA helicase DDX24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26934.26934.4 16.13 11.05 2.161 5 2 2 0 911.6696 3483.7176 S232s S240s Hydrogen 232 (R) sPGKAEAEsDALPDDTVIESEALPSDIAAEAR (A) S(0.99)PGKAEAES(0.99)DALPDDT(0.0)VIES(0.0)EALPS(0.0)DIAAEAR K:TMT10-Lys-Only,s:Phosphorylated S DDX24 90923.6 3 12 432.1 315.56 HUMAN 1 1.2211 0.0856 EAGAGRASYISSARL-p Q3LXA3;S545-p EAGAGRASYISSARL 0.53433256799454 0.554948141427607 -0.0826666666666667 -0.072 5.04067276631364 3.44581895708819 -0.0833852361305457 -0.072 0.313280038408916 0.452291164913989 -1.11150641961016 -0.809471911762869 Q3LXA3 TKFC Q3LXA3.S545.p_TKFC Q3LXA3_S545s _1_1_545_545 Q3LXA3 Q3LXA3 Triokinase/FMN cyclase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8448.8448.3 15.56 15.56 3.292 4 1 1 0 650.6406 1869.9439 S545s TMT10 536 (K) NMEAGAGRAsYISSAR (L) NMEAGAGRAS(0.99)Y(0.0)IS(0.0)S(0.0)AR s:Phosphorylated S TKFC 59288.4 1 6 1831.1 112.39 HUMAN 1 -5.0407 -3.4458 EAGEAVASPMDDGFV-p P49354;S49-p EAGEAVASPMDDGFV 0.53494190060823 0.292002406405662 -0.0886666666666667 0.101 5.02863957405991 7.05619838894924 -0.0886666666666667 0.101 0.314149261122002 0.196960963961171 -1.10930388947036 1.47043737921612 P49354 FNTA P49354.S49.p_FNTA P49354_S49s _1_1_49_49 P49354 P49354 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.32737.32737.4 15.52 15.52 1.375 6 1 1 0 904.6597 3535.6446 S49s TMT10 37 (K) EEMAAEAGEAVAsPMDDGFVSLDSPSYVLYR (D) EEMAAEAGEAVAS(0.99)PMDDGFVS(0.0)LDS(0.0)PS(0.0)Y(0.0)VLY(0.0)R s:Phosphorylated S FNTA 44521.9 1 1 4714.1 27.54 HUMAN 1 -5.0286 7.0562 EAGEKGPTPPLPSAP-p Q14865;T539-p EAGEKGPTPPLPSAP 0.807677513163485 0.00816609575623382 -0.0363333333333333 0.507333333333333 1.78277770140014 29.7314404195554 -0.0363333333333333 0.507333333333333 0.663318683111862 0.00106379013364668 -0.460140516518835 6.34089559664094 Q14865 ARID5B Q14865.T539.p_ARID5B Q14865_T539t _1_1_539_539 Q14865 Q14865|Q14865-2 AT-rich interactive domain-containing protein 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21062.21062.3 18.36 11.99 2.999 2 1 1 0 1018.2242 2972.6912 T539t TMT10 529 (K) VAEEAGEKGPtPPLPSAPLAPEK (D) VAEEAGEKGPT(0.99)PPLPS(0.0)APLAPEK K:TMT10,t:Phosphorylated T ARID5B 133513.4 3 4 1262.1 160.88 HUMAN 1 -1.7828 29.7314 EAGELRRSLGEGAKE-p Q5TZA2;S1204-p EAGELRRSLGEGAKE 0.40198481120648 0.023345939998049 0.151666666666667 -0.350666666666667 7.30315512050952 22.2641939795063 0.151666666666667 -0.350666666666667 0.186073483402884 0.00593718528015436 1.51398149820645 -4.3779052656462 Q5TZA2 CROCC Q5TZA2.S1204.p_CROCC Q5TZA2_S1204s _1_1_1204_1204 Q5TZA2 Q5TZA2|Q5TZA2-2 Rootletin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9038.9038.2 8.85 1.12 99 1 1 1 0 600.3256 1119.6774 S1204s TMT10 1204 (R) sLGEGAK (E) S(1.0)LGEGAK K:TMT10,s:Phosphorylated S CROCC 228918.7 1 4 912.1 201.7 HUMAN 1 7.3032 -22.2642 EAGFRRLTPTEVKDY-p P25787;T222-p EAGFRRLTPTEVKDY 0.525216683556162 0.801181810191605 -0.0863333333333333 0.0266666666666667 5.17249177233844 1.34660905773189 -0.0863333333333333 0.0266666666666667 0.303914081288781 0.733396941070146 -1.13557621186143 0.358658761674936 P25787 PSMA2 P25787.T222.p_PSMA2 P25787_T222t _1_1_222_222 P25787 P25787|C9JCK5 Proteasome subunit alpha type-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10390.10390.2 7.95 1.84 1.693 2 1 1 0 741.4286 1401.883 T222t TMT10 220 (R) RLtPTEVK (D) RLT(0.99)PT(0.0)EVK K:TMT10,t:Phosphorylated T PSMA2 26012.2 2 3 4092.1 37.8 HUMAN 1 -5.1725 1.3466 EAGGLGISIKGGREN-p Q13425;S129-p EAGGLGISIKGGREN 0.12656840713573 0.394486665503224 -0.311 0.130666666666667 18.6482960358861 5.36926439011072 -0.311 0.130666666666667 0.0136511863888071 0.290451458074953 -3.59467701643094 1.17106609398169 Q13425 SNTB2 Q13425.S129.p_SNTB2 Q13425_S129s _1_1_129_129 Q13425 Q13425|Q13425-2 Beta-2-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19921.19921.3 11.27 8.92 99 1 1 1 0 537.636 1530.9256 S129s TMT10 121 (K) QEAGGLGIsIK (G) QEAGGLGIS(1.0)IK K:TMT10,s:Phosphorylated S SNTB2 58405 1 5 637.1 255.93 HUMAN 1 -18.6483 5.3693 EAGKALDYYMLRNGD-p Q9Y490;Y70-p EAGKALDYYMLRNGD 0.916520566451657 0.10048620458838 -0.0156666666666667 -0.178333333333333 0.739010320793433 13.1851421076853 -0.0156666666666667 -0.178333333333333 0.843526960524071 0.048027036481402 -0.207066610814803 -2.54306357400584 Q9Y490 TLN1 Q9Y490.Y70.p_TLN1 Q9Y490_Y70y _1_1_70_70 Q9Y490 Q9Y490 Talin-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.26614.26660.2 15.14 7.78 1.332 2 1 1 0 677.3277 1273.6812 Y70y TMT10 67 (K) ALDyYMLR (N) ALDY(0.99)Y(0.0)MLR y:Phosphorylated Y TLN1 271930.4 4 2 49.1 44.07 HUMAN 1 -0.739 -13.1851 EAGKLSKSCNITECQ-p Q6ZN28;S34-p EAGKLSKSCNITECQ 0.800184395951359 0.538424435115317 0.0583333333333333 -0.069 1.86586383221358 3.61736974919608 0.0583333333333334 -0.0661387870438263 0.650749160888539 0.434773459618199 0.4788873652071 -0.843111319221674 Q6ZN28 MACC1 Q6ZN28.S34.p_MACC1 Q6ZN28_S34s _1_1_34_34 Q6ZN28 Q6ZN28 Metastasis-associated in colon cancer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28957.28957.4 21.56 21.56 4.455 3 1 1 0 778.6031 3031.424 S34s TMT10 34 (K) sCNITECQDPDLLHNWPDAFTLR (G) S(0.99)CNIT(0.0)ECQDPDLLHNWPDAFT(0.0)LR C:Carbamidomethylation,s:Phosphorylated S MACC1 97436.1 2 2 744.1 233.51 HUMAN 1 1.8659 -3.6174 EAGPKESSEEGKEGK-p Q3YEC7-2;S642-p EAGPKESSEEGKEGK 0.232365737282587 0.216726525730446 -0.28 0.125 12.1845994742736 8.7368247736859 -0.28 0.125 0.0604700116912992 0.133757308942632 -2.36512079458155 1.76219320064687 Q3YEC7 RABL6 Q3YEC7.2.S642.p_RABL6 Q3YEC7-2_S641sS642s_2_2_641_642 Q3YEC7-2 Q3YEC7-2 Isoform 2 of Rab-like protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26352.26554.5 18.36 16.05 18.365 3 2 2 0 745.9799 3565.9407 S641s S642s TMT10 622 (R) LKNDSDLFGLGLEEAGPKEssEEGK (E) LKNDS(0.0)DLFGLGLEEAGPKES(0.99)S(0.99)EEGK K:TMT10,s:Phosphorylated S RABL6 79919.7 15 13 429.1 317.58 HUMAN 1 -12.1846 8.7368 EAGQFEPSETTAKS_-p Q5JTJ3-2;S150-p EAGQFEPSETTAKS_ 0.36851629338865 0.170340933217364 0.139 0.140666666666667 8.03778869492753 10.1070356532971 0.139 0.140666666666667 0.157116259240184 0.0975655359719748 1.64171532485524 1.99949415297412 Q5JTJ3 COA6 Q5JTJ3.2.S150.p_COA6 Q5JTJ3-2_S150s _1_1_150_150 Q5JTJ3-2 Q5JTJ3-2|X6R5Z6|Q5JTJ3-3 Isoform 2 of Cytochrome c oxidase assembly factor 6 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15769.15769.3 16.39 11.64 1.138 4 1 1 0 885.1158 2573.3702 S150s TMT10 140 (K) EKFEAGQFEPsETTAKS (-) EKFEAGQFEPS(0.99)ET(0.0)T(0.0)AKS(0.0) K:TMT10,s:Phosphorylated S COA6 18492.8 3 2 3081.1 61.24 HUMAN 1 8.0378 10.107 EAGRQLVSEGNIHAD-p O15020;S1240-p EAGRQLVSEGNIHAD 0.358982402640135 0.806313780212511 0.78 0.236333333333333 8.26803851032092 1.30803326041119 0.78 0.236333333333333 0.149003389910758 0.739940287463734 1.68162899485631 0.349419288438752 O15020 SPTBN2 O15020.S1240.p_SPTBN2 O15020_S1240s_1_1_1240_1240 O15020 O15020|O15020-2 Spectrin beta chain, non-erythrocytic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4582.4582.5 8.18 3.98 99 1 1 1 0 514.275 2486.3677 S1240s N1243n Hydrogen 1228 (R) IHGLLEAGRQLVsEGnIHADK (I) IHGLLEAGRQLVS(1.0)EGN(1.0)IHADK K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated SPTBN2 272689.3 1 5 781.1 225.92 HUMAN 1 8.268 1.308 EAGRREISPQKNGPE-p A0A0G2JNU3;S938-p EAGRREISPQKNGPE 0.2040437776167 0.00397381279792281 0.342 -0.699666666666667 13.3672411503567 35.394840539397 0.342 -0.699666666666667 0.0460549043814056 0.000288745979656799 2.57745720402275 -8.24070973368933 A0A0G2JNU3 NotFound A0A0G2JNU3.S938.p_NotFound A0A0G2JNU3_S938s _1_1_938_938 A0A0G2JNU3 A6H8Y1|A0A0G2JNU3|A6H8Y1-6 Transcription factor TFIIIB component B'' homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20997.20997.4 10.51 2.83 5.569 2 1 1 0 883.988 3452.9658 S938s TMT10 936 (R) EIsPQKNGPEEVKPLGEVETDLK (A) EIS(0.99)PQKNGPEEVKPLGEVET(0.0)DLK K:TMT10,s:Phosphorylated S BDP1 295548.6 1 3 2021.1 102.05 HUMAN 1 13.3672 -35.3948 EAHGVSESEGEERPV-p Q9BVJ6;S407-p EAHGVSESEGEERPV 0.657493781284077 0.998260547408425 -0.0736666666666667 0.000333333333333352 3.41578101163978 0.0102728356431051 -0.0736666666666667 0.000333333333333362 0.455430276690212 0.997637387551122 -0.803667752769614 0.00310004699931637 Q9BVJ6 UTP14A Q9BVJ6.S407.p_UTP14A Q9BVJ6_S405sS407s_2_2_405_407 Q9BVJ6 Q9BVJ6|Q9BVJ6-3|Q9BVJ6-2 U3 small nucleolar RNA-associated protein 14 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28837.28837.5 17.37 10.14 15.15 3 2 2 0 1039.868 5035.413 S405s S407s TMT10 386 (K) EAATQEDPEQLPELEAHGVsEsEGEERPVAEEEILLREFEER (R) EAAT(0.0)QEDPEQLPELEAHGVS(0.99)ES(0.99)EGEERPVAEEEILLREFEER s:Phosphorylated S UTP14A 88147.4 6 15 550.1 274.41 HUMAN 1 -3.4158 0.0103 EAIKNGATPIQELRK-p Q8IYA6;T586-p EAIKNGATPIQELRK 0.137150835639332 0.00868829757416166 0.305 -0.619 17.7025049309883 29.2265335874598 0.305 -0.619 0.0169726441907196 0.00119494149155699 3.4023063395545 -6.19072202212203 Q8IYA6 CKAP2L Q8IYA6.T586.p_CKAP2L Q8IYA6_T586t _1_1_586_586 Q8IYA6 Q8IYA6|Q8IYA6-3|Q8IYA6-2 Cytoskeleton-associated protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32787.32787.5 20.16 20.16 6.938 3 1 1 0 706.7952 3449.9611 T586t TMT10 569 (K) GTFDVIGLYEEAIKNGAtPIQELRK (V) GT(0.0)FDVIGLY(0.0)EEAIKNGAT(0.99)PIQELRK K:TMT10,t:Phosphorylated T CKAP2L 84155.7 1 1 4114.1 37.31 HUMAN 1 17.7025 -29.2265 EAIKRCCSPPNELGF-p Q9BYW2;S532-p EAIKRCCSPPNELGF 0.435827741560938 0.258083111814441 0.119333333333333 0.133666666666667 6.64107139284836 7.75072708318937 0.119333333333333 0.133666666666667 0.216716940398353 0.16785229811628 1.39802648718622 1.59139841406119 Q9BYW2 SETD2 Q9BYW2.S532.p_SETD2 Q9BYW2_S532s _1_1_532_532 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15133.15339.2 12.11 8.32 99 1 1 1 0 823.3565 1565.7402 S532s TMT10 530 (R) CCsPPNELGFR (R) CCS(1.0)PPNELGFR C:Carbamidomethylation,s:Phosphorylated S SETD2 290615.4 8 6 58.1 711.11 HUMAN 1 6.6411 7.7507 EAILKRESGAAEQVD-p Q9P2R3-4;S903-p EAILKRESGAAEQVD 0.0364692698286226 0.521713036242059 -0.683 -0.075 32.9800078640973 3.79731430709416 -0.683 -0.075 0.000503499697062259 0.417127256743203 -7.39259446658842 -0.878038961194836 Q9P2R3 ANKFY1 Q9P2R3.4.S903.p_ANKFY1 Q9P2R3-4_S903s _1_1_903_903 Q9P2R3-4 Q9P2R3-4|Q9P2R3-2 Isoform 4 of Rabankyrin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5748.5748.3 12.74 12.74 99 1 1 1 0 614.6432 1761.9495 S903s TMT10 901 (K) REsGAAEQVDNK (G) RES(1.0)GAAEQVDNK K:TMT10,s:Phosphorylated S ANKFY1 134644.7 2 1 5192.1 22.01 HUMAN 1 -32.98 -3.7973 EAKASLQSPFEQTNW-p O95402;S470-p EAKASLQSPFEQTNW 0.858167579874027 0.949945132203377 -0.0283333333333333 -0.00933333333333332 1.29427405617461 0.319508332841091 -0.0283333333333333 -0.00933333333333333 0.742288264373549 0.929071561526137 -0.34614788831543 -0.093226549239021 O95402 MED26 O95402.S470.p_MED26 O95402_S470s _1_1_470_470 O95402 O95402 Mediator of RNA polymerase II transcription subunit 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22738.22738.3 10.62 10.62 2.911 3 1 1 0 692.0191 1994.0747 S470s TMT10 466 (K) ASLQsPFEQTNWK (E) AS(0.0)LQS(0.99)PFEQT(0.0)NWK K:TMT10,s:Phosphorylated S MED26 65901.7 1 9 901.1 203.59 HUMAN 1 -1.2943 -0.3195 EAKEKLASLEREASV-p Q8WYA0;S371-p EAKEKLASLEREASV 0.14599972063271 0.279649943769084 -0.403 0.189333333333333 17.0248878640725 7.29106168508645 -0.403 0.189333333333333 0.019838608799621 0.186592348763982 -3.26753828991634 1.51143684337845 Q8WYA0 IFT81 Q8WYA0.S371.p_IFT81 Q8WYA0_S371s _1_1_371_371 Q8WYA0 Q8WYA0|Q8WYA0-3 Intraflagellar transport protein 81 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19340.19340.3 11.71 11.71 4.391 2 1 1 0 580.994 1660.9998 S371s TMT10 369 (K) LAsLEREASVK (R) LAS(0.99)LEREAS(0.0)VK K:TMT10,s:Phosphorylated S IFT81 80086.6 2 2 4327.1 33.47 HUMAN 1 -17.0249 7.2911 EAKILRLSGKPQNAP-p Q12834;S134-p EAKILRLSGKPQNAP 0.757293022415543 0.00288941565953294 0.0663333333333333 -0.887 2.31126652607812 38.378587409622 0.0663333333333333 -0.887 0.587318048925636 0.000145258400961995 0.576681763843595 -9.42545670714369 Q12834 CDC20 Q12834.S134.p_CDC20 Q12834_S134s _1_1_134_134 Q12834 Q12834 Cell division cycle protein 20 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14607.14607.4 10.83 10.83 10.833 2 1 1 0 645.6024 2499.4196 S134s TMT10 130 (K) ILRLsGKPQNAPEGYQNR (L) ILRLS(0.99)GKPQNAPEGY(0.0)QNR K:TMT10,s:Phosphorylated S CDC20 55121 1 5 2388.1 85.57 HUMAN 1 2.3113 -38.3786 EAKILSGTPTYKRRV-p Q96LX8;T109-p EAKILSGTPTYKRRV 0.55876283968831 0.00278908336687029 -0.126 -0.880333333333333 4.66692633678033 38.66075745951 -0.126 -0.880333333333333 0.341434471978041 0.000136120725156588 -1.04265109183002 -9.54500517700663 Q96LX8 ZNF597 Q96LX8.T109.p_ZNF597 Q96LX8_T109t _1_1_109_109 Q96LX8 Q96LX8 Zinc finger protein 597 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18667.18667.3 10.35 10.35 2.468 4 1 1 0 506.6181 1437.8717 T109t TMT10 105 (K) ILSGtPTYK (R) ILS(0.0)GT(0.99)PT(0.0)Y(0.0)K K:TMT10,t:Phosphorylated T ZNF597 49216.4 1 117 240.5 415.72 HUMAN 1 -4.6669 -38.6608 EAKNKRRSGKNSQED-p Q9H1E3;S50-p EAKNKRRSGKNSQED 0.0750547208120352 0.20695534667209 0.84 0.202666666666667 24.0733127878213 8.99863058529204 0.84 0.202666666666667 0.00391443171290367 0.125932243797788 4.81283966473399 1.80747570596738 Q9H1E3 NUCKS1 Q9H1E3.S50.p_NUCKS1 Q9H1E3_S50s _1_1_50_50 Q9H1E3 Q9H1E3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7203.7203.4 8.52 8.52 1.102 4 1 1 0 749.1243 2913.5095 S50s TMT10 50 (R) sGKNSQEDSEDSEDKDVK (T) S(0.99)GKNS(0.0)QEDS(0.0)EDS(0.0)EDKDVK K:TMT10,s:Phosphorylated S NUCKS1 27295.9 7 4 48.1 767.83 HUMAN 1 24.0733 8.9986 EAKNQVNSESDSDSE-p P46100;S1322-p EAKNQVNSESDSDSE 0.335011871726365 0.961050637830868 -0.161 0.00566666666666669 8.85987741273936 0.247279199734572 -0.161 0.00566666666666668 0.130020627812575 0.944652503846488 -1.78410724622239 0.072698545826413 P46100 ATRX P46100.S1322.p_ATRX P46100_S1322sS1324sS1326s_3_3_1322_1326 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7994.7994.4 7.16 7.16 7.159 5 3 3 0 741.5819 2723.4051 S1322s S1324s S1326s TMT10 1318 (K) NQVNsEsDsDSEESKKPR (Y) NQVNS(0.99)ES(0.99)DS(0.99)DS(0.0)EES(0.0)KKPR K:TMT10,s:Phosphorylated S ATRX 285034.2 2 65 18.1 1035.36 HUMAN 1 -8.8599 0.2473 EAKSPLRSPARLLPL-p Q9BY89;S56-p EAKSPLRSPARLLPL 0.212809275527928 0.00194371730000273 -0.223333333333333 -1.125 12.9663989296263 42.4576548517752 -0.223333333333333 -1.125 0.0505079924686801 5.67851156769702e-05 -2.50501394930167 -11.2939821845642 Q9BY89 KIAA1671 Q9BY89.S56.p_KIAA1671 Q9BY89_S56s _1_1_56_56 Q9BY89 Q9BY89 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4649.4649.3 9.4 4.88 9.399 2 1 1 0 398.2186 1112.6738 S56s TMT10 52 (K) SPLRsPAR (L) S(0.0)PLRS(0.99)PAR s:Phosphorylated S KIAA1671 197734.4 2 1 105.1 590.35 HUMAN 1 -12.9664 -42.4577 EAKSRGPTPPAMGPR-p Q3KQU3;T97-p EAKSRGPTPPAMGPR 0.203825485912988 0.32552408174361 0.260333333333333 0.188 13.3840054717201 6.44994232461272 0.260333333333333 0.188 0.0458774692531899 0.226467438283238 2.58049839548473 1.36399392908628 Q3KQU3 MAP7D1 Q3KQU3.T97.p_MAP7D1 Q3KQU3_T97t _1_1_97_97 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7461.7461.2 11.12 11.12 99 1 1 1 0 530.7368 980.4982 T97t Hydrogen 95 (R) GPtPPAMGPR (D) GPT(1.0)PPAMGPR t:Phosphorylated T MAP7D1 93160.6 4 3 160.1 495.56 HUMAN 1 13.384 6.4499 EALCRQLSESESSLE-p Q16204;S323-p EALCRQLSESESSLE 0.349030139499991 0.246083177600866 0.132666666666667 0.167 8.49402926801089 8.02471593704391 0.132666666666667 0.167 0.141448085350972 0.157589909564365 1.72077271911907 1.63892674083852 Q16204 CCDC6 Q16204.S323.p_CCDC6 Q16204_S323s_1_1_323_323 Q16204 Q16204 Coiled-coil domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26011.26011.3 14.6 14.6 1.724 6 1 1 0 1123.1476 3304.4845 Q321q S323s Hydrogen 321 (R) qLsESESSLEMDDERYFNEMSAQGLRPR (T) Q(1.0)LS(0.99)ES(0.0)ES(0.0)S(0.0)LEMDDERY(0.0)FNEMS(0.0)AQGLRPR q:Pyroglutamic acid,s:Phosphorylated S CCDC6 53461.2 6 7 423.1 319.68 HUMAN 1 8.494 8.0247 EALGMKGTPSLGKCR-p Q9BW71;T471-p EALGMKGTPSLGKCR 0.563013794878289 0.00374539144374057 0.0886666666666667 -0.686 4.59422675681776 35.9960411600928 0.0886666666666667 -0.686 0.347198087553938 0.000251417720202819 1.02914383488779 -8.46821940781336 Q9BW71 HIRIP3 Q9BW71.T471.p_HIRIP3 Q9BW71_T471t _1_1_471_471 Q9BW71 Q9BW71|Q9BW71-2 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23101.23101.3 18.86 18.86 2.545 2 1 1 0 790.4435 2289.3455 T471t TMT10 461 (R) AELEALGMKGtPSLGK (C) AELEALGMKGT(0.99)PS(0.0)LGK K:TMT10,t:Phosphorylated T HIRIP3 62298.3 5 15 178.1 481.23 HUMAN 1 4.5942 -35.996 EALKEAGSIVRLYVK-p Q12959-2;S301-p EALKEAGSIVRLYVK 0.555897525776823 0.518606135492881 -0.117333333333333 0.0733333333333333 4.70728995876265 3.83094732636369 -0.117333333333333 0.0733333333333333 0.33827585789615 0.41390937893722 -1.05013371097749 0.884528690014851 Q12959 DLG1 Q12959.2.S301.p_DLG1 Q12959-2_S301s _1_1_301_301 Q12959-2 Q15700-2|Q12959-2|Q12959-7|Q15700-4|Q12959-4|A0A0C4DFT3|Q12959-6|Q12959-3|E9PN83|Q12959-5|B7Z2T4|E9PIW2|Q12959-9|B7Z264|Q12959-8|P78352-2|Q15700-3|P78352-3|E7EQD7|Q6ZSU2|B4E2H8|O14909 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7536.8223.2 9.79 4.23 99 1 1 1 0 520.7704 960.5676 S301s TMT10 298 (K) EAGsIVR (L) EAGS(1.0)IVR s:Phosphorylated S DLG1 103604.4 2 12 196.1 460.79 HUMAN 1 -4.7073 3.8309 EALLEEGSPTMVEKG-p Q9HCE9;S641-p EALLEEGSPTMVEKG 0.0511487796737011 0.167788200693427 -1.06866666666667 4.00133333333333 28.3327509789871 10.1979025251499 -1.06866666666667 4.00133333333333 0.00146799610102213 0.0955453922003382 -5.94046679190795 2.20477916952314 Q9HCE9 ANO8 Q9HCE9.S641.p_ANO8 Q9HCE9_S641s _1_1_641_641 Q9HCE9 Q9HCE9|Q9HCE9-2 Anoctamin-8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17528.17528.3 13.82 10.87 1.374 3 1 1 0 940.1571 2738.4911 S641s TMT10 627 (R) RRPGPSPEALLEEGsPTMVEK (G) RRPGPS(0.0)PEALLEEGS(0.99)PT(0.0)MVEK K:TMT10,s:Phosphorylated S ANO8 137286.9 2 1 2885.1 66.96 HUMAN 1 -28.3328 10.1979 EALLHMESPTCLRDS-p Q15723;S107-p EALLHMESPTCLRDS 0.910037351231491 0.170293604862567 -0.0166666666666667 -0.147 0.80296173039312 10.108558049565 -0.0166666666666667 -0.147 0.831196731838017 0.0975313408847078 -0.22369595457726 -1.99975857992903 Q15723 ELF2 Q15723.S107.p_ELF2 Q15723_S107s _1_1_107_107 Q15723 Q15723|Q15723-1|Q15723-3|Q15723-2|Q15723-4 ETS-related transcription factor Elf-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28489.28489.3 20.8 20.8 1.68 3 1 1 0 784.3781 2271.1675 S107s TMT10 95 (K) TIEAAEALLHMEsPTCLR (D) T(0.0)IEAAEALLHMES(0.99)PT(0.0)CLR C:Carbamidomethylation,s:Phosphorylated S ELF2 64422.1 3 1 1339.1 152.08 HUMAN 1 -0.803 -10.1086 EALNERHSIINALKA-p Q96CN5;S296-p EALNERHSIINALKA 0.176240941475 0.00832650880120153 0.217666666666667 -0.452333333333333 14.9758058045934 29.564820689172 0.217666666666667 -0.452333333333333 0.0317994361615188 0.0011053961078627 2.87391476099606 -6.29102254085208 Q96CN5 LRRC45 Q96CN5.S296.p_LRRC45 Q96CN5_S296s _1_1_296_296 Q96CN5 Q96CN5 Leucine-rich repeat-containing protein 45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23270.23270.4 15.49 15.1 99 1 1 1 0 668.6248 2591.5033 S296s TMT10 284 (R) VGQLQEALNERHsIINALK (A) VGQLQEALNERHS(1.0)IINALK K:TMT10,s:Phosphorylated S LRRC45 76520.4 1 1 1795.1 114.28 HUMAN 1 14.9758 -29.5648 EALRRPASMGSEGLG-p Q6DT37;S1492-p EALRRPASMGSEGLG 0.912681689291897 0.556651851966497 0.0176666666666667 -0.0576666666666667 0.774166548418139 3.42829499207257 0.0176666666666667 -0.0576666666666667 0.836726155895434 0.454119865749687 0.216229950459966 -0.806015924729188 Q6DT37 CDC42BPG Q6DT37.S1492.p_CDC42BPG Q6DT37_S1492s _1_1_1492_1492 Q6DT37 Q6DT37 Serine/threonine-protein kinase MRCK gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11546.11546.4 13.98 8.04 1.548 2 1 1 0 618.3055 2390.2321 S1492s TMT10 1489 (R) RPAsMGSEGLGGDADPMKR (K) RPAS(0.99)MGS(0.0)EGLGGDADPMKR K:TMT10,s:Phosphorylated S CDC42BPG 173882.5 9 7 997.1 190.4 HUMAN 1 0.7742 -3.4283 EALRRTGSPLAARYM-p Q9BYX4;S88-p EALRRTGSPLAARYM 0.664787740768626 0.744144899629672 0.067 0.0416666666666667 3.31713250202663 1.77124792677494 0.067 0.0416666666666667 0.465893605610236 0.665082020244157 0.784121215550869 0.45747446421333 Q9BYX4 IFIH1 Q9BYX4.S88.p_IFIH1 Q9BYX4_S88s _1_1_88_88 Q9BYX4 Q9BYX4|Q9BYX4-2 Interferon-induced helicase C domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6601.6601.2 9.31 4.4 2.374 2 1 1 0 541.2842 1001.5941 S88s TMT10 86 (R) TGsPLAAR (Y) T(0.0)GS(0.99)PLAAR s:Phosphorylated S IFIH1 117999.2 1 1 4810.1 26.35 HUMAN 1 3.3171 1.7712 EALSALDSKANNLSS-p O75396;S168-p EALSALDSKANNLSS 0.287218129279298 0.0158781727748385 -0.412666666666667 0.36 10.2143387538606 24.863986951588 -0.412666666666667 0.36 0.0951844762632366 0.00326288152476945 -2.01897425948109 5.00321073267273 O75396 SEC22B O75396.S168.p_SEC22B O75396_S168s _1_1_168_168 O75396 O75396 Vesicle-trafficking protein SEC22b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.36246.36246.4 21.74 21.29 5.952 2 1 1 0 731.8928 2844.5905 S168s TMT10 148 (R) IMVANIEEVLQRGEALSALDsK (A) IMVANIEEVLQRGEALS(0.0)ALDS(0.99)K K:TMT10,s:Phosphorylated S SEC22B 24821.1 1 2 3041.1 62.34 HUMAN 1 -10.2143 24.864 EAMDGSETPQLFTVL-p Q13435;T780-p EAMDGSETPQLFTVL 0.689586040425026 0.302073046232533 0.059 0.106333333333333 3.02463641728685 6.86256800611067 0.059 0.106333333333333 0.498352175278333 0.20594118121359 0.72541180516697 1.43654527007112 Q13435 SF3B2 Q13435.T780.p_SF3B2 Q13435_T780t _1_1_780_780 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22962.22962.5 20.4 22.54 4.553 3 1 1 0 729.4057 3563.0325 T780t TMT10 769 (K) KKIEEAMDGSEtPQLFTVLPEKR (T) KKIEEAMDGS(0.0)ET(0.99)PQLFT(0.0)VLPEKR K:TMT10,t:Phosphorylated T SF3B2 100339.9 15 13 193.1 462.57 HUMAN 1 3.0246 6.8626 EANANGSSPEPVKAV-p Q3KQU3;S742-p EANANGSSPEPVKAV 0.380675175546367 0.0398548575294297 -0.125666666666667 -0.29 7.74847558752603 18.7688933930569 -0.125666666666667 -0.29 0.167939339678037 0.0132773272845222 -1.59149518098716 -3.61645941898962 Q3KQU3 MAP7D1 Q3KQU3.S742.p_MAP7D1 Q3KQU3_S742s _1_1_742_742 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2|Q3KQU3-3 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8161.8161.2 11.04 11.04 1.101 2 1 1 0 919.4572 1757.9434 S742s TMT10 735 (K) EANANGSsPEPVK (A) EANANGS(0.0)S(0.99)PEPVK K:TMT10,s:Phosphorylated S MAP7D1 93160.6 5 19 160.1 495.56 HUMAN 1 -7.7485 -18.7689 EANDAVNSSTKEEKG-p O15234;S125-p EANDAVNSSTKEEKG 0.111154875717767 0.00537224882275818 -0.677666666666667 0.736333333333333 19.9364293050587 32.9627901568864 -0.677666666666667 0.736333333333334 0.0101474534912266 0.000505499795591005 -3.86532067696561 7.37348864156608 O15234 CASC3 O15234.S125.p_CASC3 O15234_S125s _1_1_125_125 O15234 O15234 Protein CASC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6613.6613.2 14.91 14.91 1.212 4 1 1 0 880.9263 1680.8805 S125s TMT10 117 (K) SEANDAVNsSTK (E) S(0.0)EANDAVNS(0.99)S(0.0)T(0.0)K K:TMT10,s:Phosphorylated S CASC3 76390.7 3 4 323.1 362.08 HUMAN 1 -19.9364 32.9628 EANGPCPSPIPTPEQ-p A6NDB9;S189-p EANGPCPSPIPTPEQ 0.327442379268563 0.122651904847557 0.159 0.193333333333333 9.06947836908599 12.0197978196403 0.159 0.193333333333333 0.123894538727074 0.062808759796462 1.82039073686355 2.33467948016613 A6NDB9 PALM3 A6NDB9.S189.p_PALM3 A6NDB9_S189s _1_1_189_189 A6NDB9 A6NDB9 Paralemmin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17283.17283.3 20.7 20.7 5.736 5 1 1 0 1105.1855 3233.5694 S189s TMT10 172 (R) QVPGAAGDSSEANGPCPsPIPTPEQGLSQR (A) QVPGAAGDS(0.0)S(0.0)EANGPCPS(0.99)PIPT(0.0)PEQGLS(0.0)QR C:Carbamidomethylation,s:Phosphorylated S PALM3 72036.5 1 3 888.1 205.52 HUMAN 1 9.0695 12.0198 EANSRASSPCPEFEQ-p O60333-2;S1613-p EANSRASSPCPEFEQ 0.914191241277348 0.100504954607395 -0.016 -0.185666666666667 0.76245797143602 13.182970338928 -0.016 -0.185666666666667 0.838985012748498 0.0480510592828636 -0.213184065913774 -2.54267146213375 O60333 KIF1B O60333.2.S1613.p_KIF1B O60333-2_S1613s _1_1_1613_1613 O60333-2 O60333-4|Q4R9M9|A0A087WWA3|O60333-2 Isoform 2 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33199.33199.2 14.6 14.6 1.138 4 1 1 0 1523.2246 2965.4967 S1613s TMT10 1611 (R) ASsPCPEFEQFQIVPAVETPYLAR (A) AS(0.0)S(0.99)PCPEFEQFQIVPAVET(0.0)PY(0.0)LAR C:Carbamidomethylation,s:Phosphorylated S KIF1B 200628.3 4 12 606.1 262.24 HUMAN 1 -0.7625 -13.183 EANTRRISIVENCFG-p Q9H8W4;S16-p EANTRRISIVENCFG 0.290216881946097 0.0397961739519661 -0.151333333333333 0.383333333333333 10.1237927582068 18.77967280868 -0.151333333333333 0.383333333333333 0.0971898080019221 0.013244413129713 -2.00322593873454 3.61868545727448 Q9H8W4 PLEKHF2 Q9H8W4.S16.p_PLEKHF2 Q9H8W4_S16s _1_1_16_16 Q9H8W4 Q9H8W4 Pleckstrin homology domain-containing family F member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24427.24427.3 22.71 22.71 17.306 2 1 1 0 855.7783 2485.3547 S16s TMT10 14 (R) RIsIVENCFGAAGQPLTIPGR (V) RIS(0.99)IVENCFGAAGQPLT(0.0)IPGR C:Carbamidomethylation,s:Phosphorylated S PLEKHF2 28481.9 7 1 2014.1 102.32 HUMAN 1 -10.1238 18.7797 EAPEGWQTPKIYLRG-p Q9NWT8;T191-p EAPEGWQTPKIYLRG 0.19964429934349 0.361680452504628 0.215 -0.0946666666666667 13.611188417874 5.8594897840901 0.215 -0.0946666666666667 0.0435392715071251 0.259448414824682 2.62180507800828 -1.25919912583915 Q9NWT8 AURKAIP1 Q9NWT8.T191.p_AURKAIP1 Q9NWT8_T191t _1_1_191_191 Q9NWT8 Q9NWT8 Aurora kinase A-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13471.13471.2 10.08 10.08 99 1 1 1 0 840.9232 1600.8735 T191t TMT10 184 (K) EAPEGWQtPK (I) EAPEGWQT(1.0)PK K:TMT10,t:Phosphorylated T AURKAIP1 22582.1 1 1 6698.1 10.08 HUMAN 1 13.6112 -5.8595 EAPGGGHSPSPPDQQ-p Q2TAZ0-3;S1655-p EAPGGGHSPSPPDQQ 0.995213264133306 0.443963358861889 0.000999999999999996 -0.157666666666667 0.0398551010163359 4.69563203448193 0.000999999999999981 -0.157666666666667 0.99086500378319 0.339185123891404 0.0119876834139563 -1.04777280878383 Q2TAZ0 ATG2A Q2TAZ0.3.S1655.p_ATG2A Q2TAZ0-3_S1655s _1_1_1655_1655 Q2TAZ0-3 Q2TAZ0-3 Isoform 2 of Autophagy-related protein 2 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19259.19259.5 21.62 21.62 1.274 8 1 1 0 880.8169 4320.0643 S1655s TMT10 1628 (R) AQPSSPLEGQAEGVETTGSQEAPGGGHsPSPPDQQPIYFR (E) AQPS(0.0)S(0.0)PLEGQAEGVET(0.0)T(0.0)GS(0.0)QEAPGGGHS(0.99)PS(0.0)PPDQQPIY(0.0)FR s:Phosphorylated S ATG2A 215251.5 1 7 2029.1 101.69 HUMAN 1 0.0399 -4.6956 EAPGPRNSGVNYLIL-p O75815;S471-p EAPGPRNSGVNYLIL 0.361131241199818 0.0665163090645724 -0.271 -0.261666666666667 8.22288198047324 15.6569606705723 -0.271 -0.261666666666667 0.150560761259838 0.0271834098386991 -1.67380413093706 -3.00053274452788 O75815 BCAR3 O75815.S471.p_BCAR3 O75815_S471s _1_1_471_471 O75815 O75815|O75815-3|O75815-2 Breast cancer anti-estrogen resistance protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21027.21027.5 15.92 15.92 6.743 2 1 1 0 904.8397 4440.2043 S471s TMT10 462 (K) QNEAPGPRNsGVNYLILDDDDRERPWEPAAAQMEK (G) Q(0.0)N(0.0)EAPGPRN(0.0)S(0.99)GVN(0.0)Y(0.0)LILDDDDRERPWEPAAAQM(0.0)EK K:TMT10,s:Phosphorylated S BCAR3 93533.8 1 15 401.1 327.42 HUMAN 1 -8.2229 -15.657 EAPKAQLSPGIYDDT-p O75376-2;S1488-p EAPKAQLSPGIYDDT 0.791417276987856 0.0400624502813508 0.0403333333333333 0.253 1.96175002384679 18.73607269512 0.0403333333333333 0.253 0.636538970826326 0.0133780474034525 0.500314547926465 3.60968594740511 O75376 NCOR1 O75376.2.S1488.p_NCOR1 O75376-2_S1488s _1_1_1488_1488 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15730.15730.2 17.43 17.43 4.801 4 1 1 0 901.9296 1722.886 S1488s TMT10 1485 (K) AQLsPGIYDDTSAR (R) AQLS(0.99)PGIY(0.0)DDT(0.0)S(0.0)AR s:Phosphorylated S NCOR1 259453.1 5 15 35.1 889.74 HUMAN 1 1.9618 18.7361 EAPKPKSSPEQPIGQ-p Q8N201;S1327-p EAPKPKSSPEQPIGQ 0.0869195095593095 0.0201264196371064 0.502 -0.363666666666667 22.6269570086892 23.2385804483272 0.502 -0.363666666666667 0.00546140393785608 0.00474397023159115 4.46678992111925 -4.60582739770353 Q8N201 INTS1 Q8N201.S1327.p_INTS1 Q8N201_S1327s _1_1_1327_1327 Q8N201 Q8N201 Integrator complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6472.6472.2 12.87 6.43 1.374 2 1 1 0 732.8566 1384.7382 S1327s TMT10 1326 (K) SsPEQPIGQGR (I) S(0.0)S(0.99)PEQPIGQGR s:Phosphorylated S INTS1 246518.1 10 6 604.1 262.74 HUMAN 1 22.627 -23.2386 EAPKTNKSPEAKPLP-p P46087-4;S67-p EAPKTNKSPEAKPLP 0.199341528435404 0.00319849681756718 -0.345666666666667 -0.996666666666667 13.6288780137405 37.425703177427 -0.345666666666667 -0.996666666666667 0.0433622889040126 0.000180896299266461 -2.6250288554862 -9.03162539314213 P46087 NOP2 P46087.4.S67.p_NOP2 P46087-4_S67s _1_1_67_67 P46087-4 P46087-4|P46087-2|P46087-3|F5H359 Isoform 4 of Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10445.10445.4 8.98 6.87 1.354 2 1 1 0 591.603 2283.4206 S67s TMT10 64 (K) TNKsPEAKPLPGK (L) T(0.0)NKS(0.99)PEAKPLPGK K:TMT10,s:Phosphorylated S NOP2 93257.6 4 2 1090.1 179.08 HUMAN 1 -13.6289 -37.4257 EAPLPPGSFHGDFAY-p J3KNL6;S1398-p EAPLPPGSFHGDFAY 0.833010096367421 0.983599703852127 0.0303333333333333 -0.0023333333333333 1.53050792595283 0.105017684903658 0.0303333333333333 -0.0023333333333333 0.702990097380212 0.97610880760988 0.402122795740435 -0.0313542966595064 J3KNL6 SEC16A J3KNL6.S1398.p_SEC16A J3KNL6_S1398s _1_1_1398_1398 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18901.19110.3 30.3 25.42 4.28 7 1 1 0 1093.169 3197.5278 S1398s TMT10 1382 (R) SHNVAAGSYEAPLPPGsFHGDFAYGTYR (S) S(0.0)HNVAAGS(0.0)Y(0.0)EAPLPPGS(0.99)FHGDFAY(0.0)GT(0.0)Y(0.0)R s:Phosphorylated S SEC16A 253486.5 10 32 15.1 1143.82 HUMAN 1 1.5305 -0.105 EAPPLLFSDEEEKEA-p Q641Q2;S728-p EAPPLLFSDEEEKEA 0.132882806400642 0.961050637830868 -0.336 0.005 18.0757889411401 0.247350600345702 -0.336 0.005 0.0155747507756885 0.944636973321823 -3.47761975697117 0.0727189876725099 Q641Q2 FAM21A Q641Q2.S728.p_FAM21A Q641Q2_S728s _1_1_728_728 Q641Q2 Q641Q2|A0A0A0MR88|Q9Y4E1-6|Q9Y4E1-3|J3KP36|F8W7U3 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19357.19357.4 21.9 23.37 21.617 3 1 1 0 793.9352 3092.7537 S728s TMT10 715 (K) KKETVSEAPPLLFsDEEEK (E) KKET(0.0)VS(0.0)EAPPLLFS(0.99)DEEEK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 6 43 12.1 1178.3 HUMAN 1 -18.0758 0.2474 EAPRPRMSPATIAAK-p Q765P7;S428-p EAPRPRMSPATIAAK 0.801434754280439 0.0621080172192089 -0.0516666666666667 -0.356666666666667 1.85116791752287 16.0640389527833 -0.0516666666666667 -0.356666666666667 0.652954934468893 0.0247511911811205 -0.475583884674683 -3.07831018340664 Q765P7 MTSS1L Q765P7.S428.p_MTSS1L Q765P7_S428s _1_1_428_428 Q765P7 Q765P7|A0A087WXN9 MTSS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16624.16624.2 14.6 8.75 4.117 2 1 1 0 714.3898 1347.807 S428s TMT10 427 (R) MsPATIAAK (H) MS(0.99)PAT(0.0)IAAK K:TMT10,s:Phosphorylated S MTSS1L 80498.5 4 3 425.1 319.48 HUMAN 1 -1.8512 -16.064 EAPSPAPTPSPTPVE-p A0A0G2JPP5;T1545-p EAPSPAPTPSPTPVE 0.914613394015023 0.486903178516635 -0.0216666666666667 -0.077 0.75986225840562 4.17628757814716 -0.0216666666666667 -0.077 0.839486611400773 0.382270902774858 -0.212508017304638 -0.95051442332599 A0A0G2JPP5 SCRIB A0A0G2JPP5.T1545.p_SCRIB A0A0G2JPP5_T1545tS1547s_2_2_1545_1547 A0A0G2JPP5 Q14160-3|A0A0G2JPP5 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25566.25566.4 14.45 14.45 1.26 9 2 2 0 1018.5194 3911.1166 T1545t S1547s TMT10 1536 (R) LAEAPSPAPtPsPTPVEDLGPQTSTSPGRLPLSGK (K) LAEAPS(0.0)PAPT(0.99)PS(0.99)PT(0.0)PVEDLGPQT(0.0)S(0.0)T(0.0)S(0.0)PGRLPLS(0.0)GK K:TMT10,t:Phosphorylated T,s:Phosphorylated S SCRIB 178690.9 6 50 22.1 1004.81 HUMAN 1 -0.7599 -4.1763 EAPTEAPSPEARDSK-p Q15424;S344-p EAPTEAPSPEARDSK 0.84304508984975 0.0869500818518997 0.0363333333333333 0.233666666666667 1.43439546592158 14.0431819861391 0.0363333333333333 0.233666666666667 0.718721196772706 0.0394168397192036 0.379552495012436 2.69922496116521 Q15424 SAFB Q15424.S344.p_SAFB Q15424_S344s _1_1_344_344 Q15424 Q14151|Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24100.24100.5 35.06 31.84 3.372 8 1 1 0 1189.3453 5862.7209 S344s TMT10 295 (K) REPAEQPGDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPsPEAR (D) REPAEQPGDGERT(0.0)DCEPVGLEPAVEQS(0.0)S(0.0)AAS(0.0)ELAEAS(0.0)S(0.0)EELAEAPT(0.0)EAPS(0.99)PEAR C:Carbamidomethylation,s:Phosphorylated S SAFB 103096.3 13 25 83.1 629.62 HUMAN 1 1.4344 14.0432 EAPTKRKSLVMHTPP-p P46013;S538-p EAPTKRKSLVMHTPP 0.785321801685938 0.169211722443757 0.0423333333333333 -0.172 2.02272476173637 10.1463821354802 0.0423333333333333 -0.172 0.627664438851069 0.0966855977260953 0.513828740557831 -2.00632914304147 P46013 MKI67 P46013.S538.p_MKI67 P46013_S538s _1_1_538_538 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21048.21048.3 14.76 12.82 5.085 2 1 1 0 587.3367 1680.0283 S538s TMT10 538 (K) sLVMHTPPVLK (K) S(0.99)LVMHT(0.0)PPVLK K:TMT10,s:Phosphorylated S MKI67 360912.4 1 10 5.1 1918.46 HUMAN 1 2.0227 -10.1464 EAPVEIPSPSETPAK-p Q9NR48;S1953-p EAPVEIPSPSETPAK 0.89126578056507 0.841826220543585 0.0206666666666667 0.0213333333333334 0.976142077056176 1.05129534570356 0.0206666666666667 0.0213333333333334 0.798703876524948 0.785001461722091 0.267883165327239 0.286667855172635 Q9NR48 ASH1L Q9NR48.S1953.p_ASH1L Q9NR48_S1953s _1_1_1953_1953 Q9NR48 Q9NR48|Q9NR48-2 Histone-lysine N-methyltransferase ASH1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.34637.34637.4 12.17 12.17 1.15 8 1 1 0 1071.3159 4202.2637 S1953s TMT10 1943 (K) SFNEAPVEIPsPSETPAKPSEPESTLQPVLSLIPR (E) S(0.0)FNEAPVEIPS(0.99)PS(0.0)ET(0.0)PAKPS(0.0)EPES(0.0)T(0.0)LQPVLS(0.0)LIPR K:TMT10,s:Phosphorylated S ASH1L 336378.7 3 20 245.1 412 HUMAN 1 0.9761 1.0513 EAQAEACSGERTYQE-p Q9NX24;S19-p EAQAEACSGERTYQE 0.281285200254826 0.124165409708268 0.212666666666667 0.169333333333333 10.4166939444115 11.9525069017784 0.212666666666667 0.169333333333333 0.0908511869331708 0.0637895164183865 2.05420666374439 2.32275990305922 Q9NX24 NHP2 Q9NX24.S19.p_NHP2 Q9NX24_S19s _1_1_19_19 Q9NX24 Q9NX24|J3QSY4 H/ACA ribonucleoprotein complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9482.9482.3 16.96 13.05 99 1 1 1 0 847.0688 2459.2237 S19s TMT10 4 (K) IKADPDGPEAQAEACsGER (T) IKADPDGPEAQAEACS(1.0)GER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NHP2 17543.1 2 1 4277.1 34.36 HUMAN 1 10.4167 11.9525 EAQGSGESDGEDGAW-p Q9UPN7;S638-p EAQGSGESDGEDGAW 0.326502819643871 0.0277238968700976 -0.197666666666667 0.336666666666667 9.10133557861663 21.1134800339251 -0.197666666666667 0.336666666666667 0.122989048646748 0.00773841464386495 -1.8259061124702 4.11796523936297 Q9UPN7 PPP6R1 Q9UPN7.S638.p_PPP6R1 Q9UPN7_S635sS638s_2_2_635_638 Q9UPN7 Q9UPN7 Serine/threonine-protein phosphatase 6 regulatory subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18501.18501.4 35.5 35.5 11.221 3 2 2 0 1162.2118 4485.8784 S635s S638s TMT10 615 (K) DRIQQFDDDEEEEDEEEAQGsGEsDGEDGAWQGSQLAR (G) DRIQQFDDDEEEEDEEEAQGS(0.99)GES(0.99)DGEDGAWQGS(0.0)QLAR s:Phosphorylated S PPP6R1 97349.5 4 6 1319.1 154.5 HUMAN 1 -9.1013 21.1135 EAQLGRGSFMLGLET-p Q92905;S284-p EAQLGRGSFMLGLET 0.110649593513984 0.0557606904135744 -0.414666666666667 0.224666666666667 20.0058054048229 16.7036936754359 -0.414666666666667 0.224666666666667 0.00998664149183716 0.0213614452534704 -3.88019638037151 3.20211338629783 Q92905 COPS5 Q92905.S284.p_COPS5 Q92905_S284s _1_1_284_284 Q92905 Q92905 COP9 signalosome complex subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21357.21357.4 22.21 22.21 2.547 3 1 1 0 696.59 2703.3722 S284s TMT10 273 (K) LEQSEAQLGRGsFMLGLETHDR (K) LEQS(0.0)EAQLGRGS(0.99)FMLGLET(0.0)HDR s:Phosphorylated S COPS5 37806.4 3 2 2859.1 67.95 HUMAN 1 -20.0058 16.7037 EAQRLADSPPPQVWQ-p Q5HY81;S90-p EAQRLADSPPPQVWQ 0.393895312924686 0.128967681093124 0.116333333333333 0.227666666666667 7.46510890166473 11.7258110690339 0.116333333333333 0.227666666666667 0.179262360080613 0.0672076783323527 1.54220720564189 2.28268496395467 Q5HY81 NotFound Q5HY81.S90.p_NotFound Q5HY81_S90s _1_1_90_90 Q5HY81 Q5HY81|P11441 Ubiquitin-like protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.33233.33233.5 22.21 18.25 6.898 2 1 1 0 669.1654 3261.8247 S90s TMT10 77 (K) VLLEEGEAQRLADsPPPQVWQLISK (V) VLLEEGEAQRLADS(0.99)PPPQVWQLIS(0.0)K K:TMT10,s:Phosphorylated S UBL4A 20664.3 11 1 3805.1 42.75 HUMAN 1 7.4651 11.7258 EAQRVDDSPSTSGGS-p Q96LR5;S11-p EAQRVDDSPSTSGGS 0.736308020259183 0.329123711836124 -0.049 0.14 2.51968066645146 6.38988957298752 -0.049 0.14 0.559798761574381 0.229620703247357 -0.621043695398843 1.35339262137245 Q96LR5 UBE2E2 Q96LR5.S11.p_UBE2E2 Q96LR5_S11s _1_1_11_11 Q96LR5 Q96LR5|F8W8F0|F8WF15 Ubiquitin-conjugating enzyme E2 E2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6209.6209.4 26.66 26.66 3.975 7 1 1 0 942.6772 3687.7168 S11s Hydrogen 8 (R) VDDsPSTSGGSSDGDQRESVQQEPEREQVQPK (K) VDDS(0.99)PS(0.0)T(0.0)S(0.0)GGS(0.0)S(0.0)DGDQRES(0.0)VQQEPEREQVQPK K:TMT10-Lys-Only,s:Phosphorylated S UBE2E2 22540 4 1 2081.1 98.49 HUMAN 1 -2.5197 6.3899 EAQSLSHSPKRVPTT-p Q8NEN9;S521-p EAQSLSHSPKRVPTT 0.283719734356722 0.0139668836897806 -0.318666666666667 -0.590333333333333 10.3343299071195 25.7382349533524 -0.318666666666667 -0.590333333333333 0.0925906236421004 0.00266794274152453 -2.03985958701495 -5.2264361408086 Q8NEN9 PDZD8 Q8NEN9.S521.p_PDZD8 Q8NEN9_S521s _1_1_521_521 Q8NEN9 Q8NEN9 PDZ domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13152.13152.5 15.34 15.34 1.2 3 1 1 0 537.4803 2603.4032 S521s TMT10 507 (R) AQNEFKDEAQSLSHsPK (R) AQNEFKDEAQS(0.0)LS(0.0)HS(0.99)PK K:TMT10,s:Phosphorylated S PDZD8 129759.1 1 1 1977.1 104.58 HUMAN 1 -10.3343 -25.7382 EARADRFSSCIDMGK-p O15020;S1964-p EARADRFSSCIDMGK 0.872258828483717 0.332504647914379 -0.0296666666666667 -0.11 1.16129743475626 6.33628695225265 -0.0296666666666667 -0.11 0.765367922613022 0.232472349451145 -0.313862775982772 -1.3439199715883 O15020 SPTBN2 O15020.S1964.p_SPTBN2 O15020_S1964s _1_1_1964_1964 O15020 O15020|O15020-2 Spectrin beta chain, non-erythrocytic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15235.15235.2 10.75 9.29 1.147 2 1 1 0 962.9564 1844.9399 S1964s TMT10 1960 (R) ADRFsSCIDMGK (E) ADRFS(0.99)S(0.0)CIDMGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SPTBN2 272689.3 8 9 781.1 225.92 HUMAN 1 -1.1613 -6.3363 EARDWRQSPGEVGDR-p A0A0G2JHC2;S175-p EARDWRQSPGEVGDR 0.561099518094358 0.00219928027114295 -0.149666666666667 -0.758333333333333 4.6208891464237 41.2411196193381 -0.149666666666667 -0.758333333333334 0.345073084072718 7.51429149198204e-05 -1.03410215082848 -10.7039340884578 A0A0G2JHC2 NotFound A0A0G2JHC2.S175.p_NotFound A0A0G2JHC2_S175s _1_1_175_175 A0A0G2JHC2 Q6NYC8|A0A0G2JHC2|Q6NYC8-2 PPP1R18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7973.7973.3 12.41 9.98 99 1 1 1 0 570.9325 1630.8135 S175s TMT10 171 (R) DWRQsPGEVGDR (S) DWRQS(1.0)PGEVGDR s:Phosphorylated S PPP1R18 68325.8 1 5 1213.1 166.15 HUMAN 1 -4.6209 -41.2411 EAREAARSPDKPGGS-p Q9Y3T9;S49-p EAREAARSPDKPGGS 0.817235134117692 0.082465386097076 0.038 -0.221333333333333 1.68492182669163 14.3573012141319 0.038 -0.221333333333333 0.678434332253453 0.0366665356469749 0.437837151284142 -2.75705360214464 Q9Y3T9 NOC2L Q9Y3T9.S49.p_NOC2L Q9Y3T9_S49s _1_1_49_49 Q9Y3T9 Q9Y3T9 Nucleolar complex protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4047.4047.4 15.94 10.9 15.94 4 1 1 0 552.7852 2128.1511 S49s TMT10 45 (R) EAARsPDKPGGSPSASR (R) EAARS(0.99)PDKPGGS(0.0)PS(0.0)AS(0.0)R K:TMT10,s:Phosphorylated S NOC2L 85773.7 9 2 1605.1 128.26 HUMAN 1 1.6849 -14.3573 EARERRPSPGEMRDQ-p A0A0G2JHC2;S125-p EARERRPSPGEMRDQ 0.536103580898608 0.569034011964778 0.108 0.119 5.01153229898069 3.29898454362102 0.108 0.119 0.315389165560275 0.467844518722217 1.10617104711891 0.780395936706625 A0A0G2JHC2 NotFound A0A0G2JHC2.S125.p_NotFound A0A0G2JHC2_S125s _1_1_125_125 A0A0G2JHC2 Q6NYC8|A0A0G2JHC2|Q6NYC8-2|Q6NYC8-3 PPP1R18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6244.6244.4 9.55 9.55 9.547 2 1 1 0 506.5127 1943.0533 S125s TMT10 123 (R) RPsPGEMRDQSPK (G) RPS(0.99)PGEMRDQS(0.0)PK K:TMT10,s:Phosphorylated S PPP1R18 68325.8 3 2 1213.1 166.15 HUMAN 1 5.0115 3.299 EARGPQESPQKMSEE-p Q8N1F8;S493-p EARGPQESPQKMSEE 0.385914038502364 0.233675898412026 -0.221666666666667 0.312333333333333 7.65484168167215 8.31451223363997 -0.221666666666667 0.312333333333333 0.171599426407967 0.147417409964123 -1.57522116818733 1.68912306730515 Q8N1F8 STK11IP Q8N1F8.S493.p_STK11IP Q8N1F8_S493s _1_1_493_493 Q8N1F8 Q8N1F8|C9JQV3|Q8N1F8-2 Serine/threonine-protein kinase 11-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4346.4346.2 8.07 8.07 99 1 1 1 0 590.2848 1099.5945 S493s Hydrogen 489 (R) GPQEsPQK (M) GPQES(1.0)PQK K:TMT10-Lys-Only,s:Phosphorylated S STK11IP 122825.3 2 7 813.1 220.97 HUMAN 1 -7.6548 8.3145 EARLARSSPEQPRPS-p P29590-8;S505-p EARLARSSPEQPRPS 0.312378709489771 0.0256214298289291 0.148333333333333 0.398333333333333 9.455920039897 21.6507109518554 0.148333333333333 0.398333333333333 0.113346469155743 0.00683799698251789 1.88731936179977 4.23811938082863 P29590 PML P29590.8.S505.p_PML P29590-8_S505s _1_1_505_505 P29590-8 P29590|P29590-11|P29590-8|P29590-3|P29590-13|P29590-9|P29590-5|P29590-2|P29590-12|H3BT57|P29590-4 Isoform PML-2 of Protein PML HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5606.5606.4 12.07 6.2 1.413 5 1 1 0 545.5466 2099.1973 S505s TMT10 501 (R) LARSsPEQPRPSTSK (A) LARS(0.0)S(0.99)PEQPRPS(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S PML 92374.1 15 10 777.1 226.8 HUMAN 1 9.4559 21.6507 EARLGAASLKFGARD-p O60231;S338-p EARLGAASLKFGARD 0.989212250278208 0.0712551574947493 -0.00633333333333334 -0.269 0.0958843118948767 15.2523508009003 -0.00633333333333337 -0.269 0.978163760469095 0.0298376709273031 -0.0286591198672996 -2.92396762345688 O60231 DHX16 O60231.S338.p_DHX16 O60231_S338s _1_1_338_338 O60231 O60231 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15797.15797.2 9.41 1.62 99 1 1 1 0 599.3549 1117.7345 S338s TMT10 334 (R) LGAAsLK (F) LGAAS(1.0)LK K:TMT10,s:Phosphorylated S DHX16 119946.1 1 4 2216.1 93.19 HUMAN 1 -0.0959 -15.2524 EARMRLESLSYQLSG-p Q03252;S316-p EARMRLESLSYQLSG 0.616051200917198 0.522105036405736 -0.067 0.0756666666666667 3.90514090557707 3.79337426029642 -0.067 0.0756666666666667 0.406898331897415 0.417505858526622 -0.898953249406243 0.877277926672054 Q03252 LMNB2 Q03252.S316.p_LMNB2 Q03252_S316s _1_1_316_316 Q03252 Q03252 Lamin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22495.22495.2 14.16 14.16 2.36 4 1 1 0 887.9642 1694.9526 S316s Hydrogen 314 (R) LEsLSYQLSGLQK (Q) LES(0.99)LS(0.0)Y(0.0)QLS(0.0)GLQK K:TMT10-Lys-Only,s:Phosphorylated S LMNB2 70061.3 10 28 440.2 312.01 HUMAN 1 -3.9051 3.7934 EARNKAGTPVSELTK-p O75113;T242-p EARNKAGTPVSELTK 0.148266672319898 0.0402508045710695 -0.275 0.280333333333333 16.7747878617813 18.7086716320919 -0.275 0.280333333333333 0.0210146041579916 0.0134627207265257 -3.21840797427596 3.60403588842606 O75113 N4BP1 O75113.T242.p_N4BP1 O75113_T242t _1_1_242_242 O75113 O75113 NEDD4-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15964.15964.2 15.07 11.02 2.586 3 1 1 0 770.9214 1460.8725 T242t TMT10 240 (K) AGtPVSELTK (Q) AGT(0.99)PVS(0.0)ELT(0.0)K K:TMT10,t:Phosphorylated T N4BP1 101289.8 7 3 889.1 205.17 HUMAN 1 -16.7748 18.7087 EARNSWDSPAFSNDV-p A0A087WWK8;S501-p EARNSWDSPAFSNDV 0.470110243897234 0.519589992609842 0.117666666666667 0.061 6.0518576848835 3.81999944783035 0.117666666666667 0.0610000000000001 0.248207117782654 0.414954095392354 1.29379634791401 0.882417514263311 A0A087WWK8 IQSEC1 A0A087WWK8.S501.p_IQSEC1 A0A087WWK8_S501s _1_1_501_501 A0A087WWK8 A0A087WWK8|Q6DN90|Q6DN90-2|A0A0C4DGT3 IQ motif and SEC7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21280.21280.2 14.46 14.46 2.411 3 1 1 0 958.9393 1836.9078 S501s TMT10 497 (R) NSWDsPAFSNDVIR (K) NS(0.0)WDS(0.99)PAFS(0.0)NDVIR s:Phosphorylated S IQSEC1 125330.2 2 9 768.1 228.42 HUMAN 1 6.0519 3.82 EARTFNGSIELCRAD-p V9GYM8;S756-p EARTFNGSIELCRAD 0.918430174900821 0.0189173566597529 0.0183333333333333 -0.389333333333333 0.720645145817185 23.7071061258464 0.0183333333333333 -0.389333333333333 0.847101567589577 0.00425882100523557 0.202258457401752 -4.7181086735489 V9GYM8 NotFound V9GYM8.S756.p_NotFound V9GYM8_S756s _1_1_756_756 V9GYM8 V9GYM8 Rho guanine nucleotide exchange factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17032.17032.2 14.59 14.59 3.759 2 1 1 0 753.3549 1425.7358 S756s TMT10 752 (R) TFNGsIELCR (A) T(0.0)FNGS(0.99)IELCR C:Carbamidomethylation,s:Phosphorylated S ARHGEF2 117095.6 1 15 380.1 335.31 HUMAN 1 0.7206 -23.7071 EARYEAVSPERLELE-p Q92585;S45-p EARYEAVSPERLELE 0.848129106666636 0.889469027764128 0.0353333333333333 0.015 1.38313176352135 0.713144675319229 0.0353333333333333 0.015 0.727255180637457 0.848565815991713 0.367401821795834 0.200271464000553 Q92585 MAML1 Q92585.S45.p_MAML1 Q92585_S45s _1_1_45_45 Q92585 Q92585 Mastermind-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16529.16529.3 11.7 7.05 11.697 2 1 1 0 633.985 1819.9751 S45s TMT10 41 (R) YEAVsPERLELER (Q) Y(0.0)EAVS(0.99)PERLELER s:Phosphorylated S MAML1 108508.8 1 1 1563.1 131.35 HUMAN 1 1.3831 0.7131 EASEPPQSPSEKRKK-p Q9P275-2;S807-p EASEPPQSPSEKRKK 0.547688375974905 0.00690174727367123 -0.0866666666666667 -0.495333333333333 4.82689198440338 30.9867018831054 -0.0866666666666667 -0.495333333333333 0.329087056802498 0.000796764198974739 -1.07223756059618 -6.72691146283533 Q9P275 USP36 Q9P275.2.S807.p_USP36 Q9P275-2_S807s_1_1_807_807 Q9P275-2 Q9P275-2|A0A075B784 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.26958.26958.5 22.02 16.01 2.461 9 1 1 0 880.4363 4317.1961 N788n S807s TMT10 776 (R) SCSSISTALPQVnEDLVSLPHQLPEASEPPQsPSEK (R) S(0.0)CS(0.0)S(0.0)IS(0.0)T(0.0)ALPQVN(1.0)EDLVS(0.0)LPHQLPEAS(0.0)EPPQS(0.99)PS(0.0)EK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S USP36 124218 5 14 241.1 413.35 HUMAN 1 -4.8269 -30.9867 EASEQFGSPVAERGK-p Q86W50;S498-p EASEQFGSPVAERGK 0.924762258201779 0.774917068004927 0.0156666666666667 0.0663333333333333 0.669226092829043 1.53203310128787 0.0156666666666667 0.0663333333333333 0.857190581878447 0.702743261429746 0.188717032685836 0.402435786790654 Q86W50 METTL16 Q86W50.S498.p_METTL16 Q86W50_S498s _1_1_498_498 Q86W50 Q86W50 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18106.18106.4 20.09 17.3 2.157 5 1 1 0 905.3995 3538.619 S498s TMT10 472 (K) GGVEVLESCQGSSNGAQDQEASEQFGsPVAER (G) GGVEVLES(0.0)CQGS(0.0)S(0.0)NGAQDQEAS(0.0)EQFGS(0.99)PVAER C:Carbamidomethylation,s:Phosphorylated S METTL16 64418.6 2 7 1049.1 183.96 HUMAN 1 0.6692 1.532 EASETLQSPGYDPSR-p Q99640;S94-p EASETLQSPGYDPSR 0.290088896650733 0.122553209791675 0.172666666666667 -0.17 10.1289474035225 12.0239998306274 0.172666666666667 -0.168432212078809 0.0970745217570405 0.0627480186469257 2.00412220478148 -2.33542417737389 Q99640 PKMYT1 Q99640.S94.p_PKMYT1 Q99640_S94s _1_1_94_94 Q99640 Q99640|Q99640-3|Q99640-2|A6NHV6|Q99640-4 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22349.22349.4 16.61 12.52 2.33 7 1 1 0 846.8884 3304.5708 S94s TMT10 86 (R) GEASETLQsPGYDPSRPESFFQQSFQR (L) GEAS(0.0)ET(0.0)LQS(0.99)PGY(0.0)DPS(0.0)RPES(0.0)FFQQS(0.0)FQR s:Phosphorylated S PKMYT1 55090.9 1 5 926.1 199.78 HUMAN 1 10.1289 -12.024 EASKLNESVMVFTKD-p Q9NS91;S322-p EASKLNESVMVFTKD 0.114688242267433 0.00916734196128833 -0.495666666666667 -0.788 19.5973903339232 28.8172213947047 -0.495666666666667 -0.788 0.0109713726549843 0.00131303970987725 -3.79307379486914 -6.0710508180538 Q9NS91 RAD18 Q9NS91.S322.p_RAD18 Q9NS91_S322s _1_1_322_322 Q9NS91 Q9NS91 E3 ubiquitin-protein ligase RAD18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24141.24141.3 16.16 16.16 4.835 3 1 1 0 821.7896 2383.3874 S322s TMT10 314 (R) LEASKLNEsVMVFTK (D) LEAS(0.0)KLNES(0.99)VMVFT(0.0)K K:TMT10,s:Phosphorylated S RAD18 57077.5 3 4 1349.1 151 HUMAN 1 -19.5974 -28.8172 EASLLKLSPATPTSE-p Q8N1G0;S374-p EASLLKLSPATPTSE 0.0768119094193664 0.0660840635677049 -0.492 0.249333333333333 23.8716403724677 15.6930508464576 -0.492 0.249333333333333 0.00410049194167221 0.0269584498087918 -4.76355823489766 3.00739754605049 Q8N1G0 ZNF687 Q8N1G0.S374.p_ZNF687 Q8N1G0_S374s _1_1_374_374 Q8N1G0 Q8N1G0|Q8N1G0-2|F8WCX2 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36936.36936.5 26.79 26.79 2.213 8 1 1 0 954.3123 4687.5689 S374s TMT10 345 (R) TVTQVPSDPDPPAPLAEGAFLAEASLLKLsPATPTSEGPK (V) T(0.0)VT(0.0)QVPS(0.0)DPDPPAPLAEGAFLAEAS(0.0)LLKLS(0.99)PAT(0.0)PT(0.0)S(0.0)EGPK K:TMT10,s:Phosphorylated S ZNF687 131979.7 2 10 156.1 501.88 HUMAN 1 -23.8716 15.6931 EASLLSHSPGTSNQS-p Q9H4Z3;S19-p EASLLSHSPGTSNQS 0.126572282263763 0.0348176205603099 0.268666666666667 0.282333333333333 18.6331390354963 19.6336738015358 0.268666666666667 0.282333333333333 0.0136989126503992 0.0108800933066483 3.5915531823753 3.79729963923339 Q9H4Z3 PCIF1 Q9H4Z3.S19.p_PCIF1 Q9H4Z3_S19s _1_1_19_19 Q9H4Z3 Q9H4Z3 Phosphorylated CTD-interacting factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9388.9388.4 15.15 15.15 1.5 7 1 1 0 812.1552 3165.6363 S19s TMT10 11 (R) EEASLLSHsPGTSNQSQPCSPKPIR (L) EEAS(0.0)LLS(0.0)HS(0.99)PGT(0.0)S(0.0)NQS(0.0)QPCS(0.0)PKPIR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCIF1 81581.1 2 1 1892.1 108.77 HUMAN 1 18.6331 19.6337 EASRLAHYNKRSTIT-p U3KQK0;Y84-p EASRLAHYNKRSTIT 0.0395731079578075 0.872719658475737 0.541 -0.0223333333333333 31.5077301231616 0.834040815648167 0.541 -0.0223333333333333 0.000706686813595942 0.82526973472213 6.90429705129101 -0.231692734189646 U3KQK0 NotFound U3KQK0.Y84.p_NotFound U3KQK0_Y84y _1_1_84_84 U3KQK0 Q6DN03|Q93079|P06899|O60814|Q99880|Q99879|Q99877|P23527|U3KQK0|Q6DRA6|Q5QNW6-2|P33778|P62807|P58876|Q16778|Q8N257 Histone H2B GG20160819_MSz_CCLE_T4D7_pY_Injection_01.5448.5448.3 9.98 1.89 99 1 1 1 0 480.6018 1359.8261 Y84y TMT10 81 (R) LAHyNKR (S) LAHY(1.0)NKR K:TMT10,y:Phosphorylated Y HIST1H2BN 18803.6 3 4 50.1 44.01 HUMAN 1 31.5077 -0.834 EASSPPASPLQHLLP-p Q96TA1;S696-p EASSPPASPLQHLLP 0.474992641256242 0.559175814734798 -0.0973333333333333 -0.081 5.95132317001966 3.40267018615908 -0.0973333333333333 -0.081 0.254019866237734 0.456807243049818 -1.27588734523538 -0.800955556047485 Q96TA1 FAM129B Q96TA1.S696.p_FAM129B Q96TA1_S696s _1_1_696_696 Q96TA1 Q96TA1|Q96TA1-2 Niban-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23719.23719.4 20.54 20.54 3.395 3 1 1 0 627.3431 2426.3808 S696s TMT10 686 (K) AAPEASSPPAsPLQHLLPGK (A) AAPEAS(0.0)S(0.0)PPAS(0.99)PLQHLLPGK K:TMT10,s:Phosphorylated S FAM129B 84649.8 2 10 1146.1 172.91 HUMAN 1 -5.9513 -3.4027 EASTAVSTPEAPEPP-p Q15477;T271-p EASTAVSTPEAPEPP 0.962849921197336 0.348058644969294 -0.011 0.106333333333333 0.317246120509302 6.07510747685944 -0.011 0.106333333333333 0.929555635057398 0.246881900714702 -0.0925966530755117 1.29762000267853 Q15477 SKIV2L Q15477.T271.p_SKIV2L Q15477_S270sT271t_2_2_270_271 Q15477 Q15477 Helicase SKI2W HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32185.32383.4 21.58 17.15 1.944 8 2 2 0 1030.4709 3958.9184 S270s T271t TMT10 264 (K) EASTAVstPEAPEPPSQEQWAIPVDATSPVGDFYR (L) EAS(0.0)T(0.0)AVS(0.99)T(0.99)PEAPEPPS(0.0)QEQWAIPVDAT(0.0)S(0.0)PVGDFY(0.0)R s:Phosphorylated S,t:Phosphorylated T SKIV2L 138722.7 1 5 2186.1 94.08 HUMAN 1 -0.3172 6.0751 EASTEDPSGEQAQEE-p Q8TCU6;S810-p EASTEDPSGEQAQEE 0.820904102287946 0.14952304721163 0.0543333333333333 0.151333333333333 1.64994185346745 10.8604625092675 0.0543333333333334 0.151333333333333 0.683920804053788 0.0820264184253902 0.429803644750317 2.13073446935556 Q8TCU6 PREX1 Q8TCU6.S810.p_PREX1 Q8TCU6_S810s _1_1_810_810 Q8TCU6 Q8TCU6|Q8TCU6-3|Q8TCU6-2 Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30146.30146.3 18.26 18.26 3.994 6 1 1 0 1257.2408 3689.7252 S810s TMT10 800 (R) ASQEASTEDPsGEQAQEEDQADSAFPLLSLGPR (L) AS(0.0)QEAS(0.0)T(0.0)EDPS(0.99)GEQAQEEDQADS(0.0)AFPLLS(0.0)LGPR s:Phosphorylated S PREX1 188881.6 1 4 379.1 336 HUMAN 1 1.6499 10.8605 EATEAAPSCVGDMAD-p Q9UHD8;S247-p EATEAAPSCVGDMAD 0.213251150765665 0.967245869098751 0.281 -0.00466666666666665 12.9404097137315 0.204634105134975 0.281 -0.00466666666666665 0.0508111505022875 0.953974112162359 2.5003345972799 -0.0604352212432786 Q9UHD8 SEPT9 Q9UHD8.S247.p_SEPT9 Q9UHD8_S247s _1_1_247_247 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2|Q9UHD8-7|Q9UHD8-3|K7EJL9 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13683.13683.3 17.13 17.13 7.381 4 1 1 0 801.3462 2322.0539 S247s TMT10 238 (R) SQEATEAAPsCVGDMADTPR (D) S(0.0)QEAT(0.0)EAAPS(0.99)CVGDMADT(0.0)PR C:Carbamidomethylation,s:Phosphorylated S SEPT9 65685.6 1 18 110.1 572.91 HUMAN 1 12.9404 -0.2046 EATQKLSSPIDMTSK-p Q16649;S353-p EATQKLSSPIDMTSK 0.0142308763066804 0.00203605351766751 -1.17666666666667 -0.929333333333333 44.641302779356 41.9643934823081 -1.17666666666667 -0.929333333333333 3.43454904205836e-05 6.36151640938121e-05 -12.4630147087932 -11.0511994470286 Q16649 NFIL3 Q16649.S353.p_NFIL3 Q16649_S353s _1_1_353_353 Q16649 Q16649 Nuclear factor interleukin-3-regulated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19007.19007.2 9.22 4.32 1.147 4 1 1 0 808.9251 1536.8708 S353s TMT10 351 (K) LSsPIDMTSK (R) LS(0.0)S(0.99)PIDMT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S NFIL3 51641.9 1 3 4069.1 38.22 HUMAN 1 -44.6413 -41.9644 EATQTPVSNKKPVFD-p Q9BXS6;S352-p EATQTPVSNKKPVFD 0.0866469112937864 0.0649219176011686 -0.341666666666667 -0.285 22.7542415658496 15.8036544242381 -0.341666666666667 -0.285 0.00530366205530791 0.0262805565153176 -4.49656938753626 -3.0284725609199 Q9BXS6 NUSAP1 Q9BXS6.S352.p_NUSAP1 Q9BXS6_S352s _1_1_352_352 Q9BXS6 Q9BXS6|Q9BXS6-2|Q9BXS6-5|Q9BXS6-3|Q9BXS6-6|Q9BXS6-4 Nucleolar and spindle-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21477.21477.4 17.21 13.27 1.413 5 1 1 0 804.2128 3133.8643 S352s TMT10 342 (K) LTTEATQTPVsNKKPVFDLK (A) LT(0.0)T(0.0)EAT(0.0)QT(0.0)PVS(0.99)NKKPVFDLK K:TMT10,s:Phosphorylated S NUSAP1 49622.1 1 9 1571.1 130.66 HUMAN 1 -22.7542 -15.8037 EAVATIMSGSKAKVR-p O43663;S265-p EAVATIMSGSKAKVR 0.620504869032167 0.498072922594333 -0.103666666666667 0.07 3.85256890713824 4.05077917436706 -0.103666666666667 0.07 0.411853830249165 0.393479474368814 -0.888841024033694 0.926665298688753 O43663 PRC1 O43663.S265.p_PRC1 O43663_S265s _1_1_265_265 O43663 O43663|O43663-4|O43663-2|O43663-3 Protein regulator of cytokinesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25719.25719.3 18.89 18.89 1.209 3 1 1 0 876.1242 2546.39 S265s TMT10 250 (R) LQIPEEEREAVATIMsGSK (A) LQIPEEEREAVAT(0.0)IMS(0.99)GS(0.0)K K:TMT10,s:Phosphorylated S PRC1 72290 3 2 715.1 238.03 HUMAN 1 -3.8526 4.0508 EAVQPVCSPLNPPGV-p A0A0U1RR07;S1409-p EAVQPVCSPLNPPGV 0.9858344442218 0.21615210124357 -0.00366666666666667 -0.164666666666667 0.125325616877052 8.75474163735874 -0.00366666666666666 -0.164666666666667 0.971555105475596 0.133206628484128 -0.0373369146020096 -1.76529220142358 A0A0U1RR07 NotFound A0A0U1RR07.S1409.p_NotFound A0A0U1RR07_S1409s _1_1_1409_1409 A0A0U1RR07 A0A0U1RR07|Q9HCH5-8|Q9HCH5-7|Q9HCH5-11|Q9HCH5-12 Synaptotagmin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34639.34639.5 12.45 12.45 12.451 4 1 1 0 1013.7154 4984.5629 S1409s TMT10 1390 (R) EVGPGEVNPEFPEAVQPVCsPLNPPGVISPWATMDTIVPDRK (D) EVGPGEVNPEFPEAVQPVCS(0.99)PLNPPGVIS(0.0)PWAT(0.0)MDT(0.0)IVPDRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SYTL2 248167.3 1 7 1920.1 107.01 HUMAN 1 -0.1253 -8.7547 EAVSTPHSWEEELNH-p Q5VZL5;S1104-p EAVSTPHSWEEELNH 0.352342970540514 0.3652549307974 -0.139333333333333 0.0986666666666667 8.41403347794996 5.79823946662943 -0.139333333333333 0.0986666666666667 0.144077661929995 0.263133446026637 -1.70691945629512 1.24824930736126 Q5VZL5 ZMYM4 Q5VZL5.S1104.p_ZMYM4 Q5VZL5_S1104s _1_1_1104_1104 Q5VZL5 Q5VZL5|Q5VZL5-4|Q5VZL5-2|Q5VZL5-3 Zinc finger MYM-type protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25688.25688.4 27.44 23.95 2.442 9 1 1 0 1005.2144 3937.8768 S1104s TMT10 1085 (K) DQGSTYSGDLESEAVSTPHsWEEELNHYALK (S) DQGS(0.0)T(0.0)Y(0.0)S(0.0)GDLES(0.0)EAVS(0.0)T(0.0)PHS(0.99)WEEELNHY(0.0)ALK K:TMT10,s:Phosphorylated S ZMYM4 176265.3 1 14 535.1 278.69 HUMAN 1 -8.414 5.7982 EAWKKQKSIEMSMKC-p Q8NEF3-2;S366-p EAWKKQKSIEMSMKC 0.300478673172259 0.839223626373866 -0.170666666666667 0.0226666666666667 9.81622123636155 1.0703672600264 -0.170666666666667 0.0226666666666667 0.104322473661623 0.781561709226117 -1.94979878946587 0.291408371477969 Q8NEF3 CCDC112 Q8NEF3.2.S366.p_CCDC112 Q8NEF3-2_S366s _1_1_366_366 Q8NEF3-2 Q8NEF3-2|D6RF76 Isoform 2 of Coiled-coil domain-containing protein 112 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16539.16539.2 9.03 9.03 9.035 2 1 1 0 682.3411 1283.7104 S366s TMT10 366 (K) sIEMSMK (C) S(0.99)IEMS(0.0)MK K:TMT10,s:Phosphorylated S CCDC112 62033.6 1 1 6858.1 9.03 HUMAN 1 -9.8162 1.0704 EAYGPCLSPPRAIPG-p Q14676;S780-p EAYGPCLSPPRAIPG 0.644079681211101 0.786496944101707 0.0906666666666667 0.05 3.57299324919538 1.44753218414201 0.0906666666666667 0.05 0.439238778455958 0.716550464034066 0.834573010525895 0.382613126939403 Q14676 MDC1 Q14676.S780.p_MDC1 Q14676_S780s _1_1_780_780 Q14676 Q14676|Q14676-3 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21522.21522.4 21.05 21.05 3.823 6 1 1 0 793.6002 3091.4152 S780s TMT10 759 (R) ESEDSETQPFDTHLEAYGPCLsPPR (A) ES(0.0)EDS(0.0)ET(0.0)QPFDT(0.0)HLEAY(0.0)GPCLS(0.99)PPR C:Carbamidomethylation,s:Phosphorylated S MDC1 227803.2 3 20 6.1 1662.62 HUMAN 1 3.573 1.4475 EAYVDSWSGSEDEAS-p Q96D09;S282-p EAYVDSWSGSEDEAS 0.926028823921153 0.0978561763962875 0.015 -0.212 0.658605473703503 13.3457801509525 0.015 -0.212 0.859289396364918 0.0462830515104169 0.185905220532782 -2.57210902597609 Q96D09 GPRASP2 Q96D09.S282.p_GPRASP2 Q96D09_S282sS284s_2_2_282_284 Q96D09 Q96D09 G-protein coupled receptor-associated sorting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34261.34261.4 14.21 14.21 1.328 8 2 2 0 1193.0369 4609.2061 S282s S284s TMT10 272 (R) SKQEAYVDSWsGsEDEASNPFSFWVGENTNNLFRPR (V) S(0.0)KQEAY(0.0)VDS(0.0)WS(0.99)GS(0.99)EDEAS(0.0)NPFS(0.0)FWVGENT(0.0)NNLFRPR K:TMT10,s:Phosphorylated S GPRASP2 94342.1 3 6 1724.1 119.44 HUMAN 1 0.6586 -13.3458 ECARVFASPLRLQSH-p Q9UK33;S103-p ECARVFASPLRLQSH 0.713772669303122 0.399477556879128 -0.0616666666666667 -0.083 2.76005591157655 5.29984686344586 -0.0616666666666667 -0.083 0.529656624986791 0.295131329107391 -0.67124086287621 -1.15848748285436 Q9UK33 ZNF580 Q9UK33.S103.p_ZNF580 Q9UK33_S103s _1_1_103_103 Q9UK33 Q9UK33 Zinc finger protein 580 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17273.17273.2 8.5 4.16 99 1 1 1 0 549.7993 1018.6247 S103s TMT10 100 (R) VFAsPLR (L) VFAS(1.0)PLR s:Phosphorylated S ZNF580 19098.4 1 2 3820.1 42.48 HUMAN 1 -2.7601 -5.2998 ECDIIKNYGFVHIED-p Q9BWF3;Y37-p ECDIIKNYGFVHIED 0.747657915422397 0.697900836872193 -0.0846666666666667 0.07 2.3987344292053 2.14743364763051 -0.0846666666666667 0.07 0.575607649829489 0.609897193952274 -0.595399743326054 0.541145693332314 Q9BWF3 RBM4 Q9BWF3.Y37.p_RBM4 Q9BWF3_Y37y _1_1_37_37 Q9BWF3 Q9BWF3|Q9BQ04|Q9BWF3-2|Q9BWF3-4|J3QRR5|U3KQD5|D6R9K7|E9PM61|Q9BWF3-3|E9PLB0 RNA-binding protein 4 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.18386.18386.3 11.96 11.96 99 1 1 1 0 587.299 1679.9157 Y37y TMT10 36 (K) NyGFVHIEDK (T) NY(1.0)GFVHIEDK K:TMT10,y:Phosphorylated Y RBM4 40712.5 2 1 297.1 11.96 HUMAN 1 -2.3987 2.1474 ECDQAGSSDMEADMA-p A0A0U1RRH6;S782-p ECDQAGSSDMEADMA 0.152872172873321 0.30961316318236 0.333 0.299 16.40038355417 6.72995446697971 0.333 0.299 0.0229066534003341 0.212326672298764 3.14545057618291 1.41327987152045 A0A0U1RRH6 NotFound A0A0U1RRH6.S782.p_NotFound A0A0U1RRH6_S781sS782s_2_2_781_782 A0A0U1RRH6 A0A0U1RRH6|O94880|O94880-2 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22529.22529.4 22.04 22.04 3.967 7 2 2 0 1076.9327 4128.7754 S781s S782s M784m TMT10 768 (K) NSYWQCSECDQAGssDmEADMAMETLPDGTKR (S) NS(0.0)Y(0.0)WQCS(0.0)ECDQAGS(0.99)S(0.99)DM(0.99)EADM(0.0)AM(0.0)ET(0.0)LPDGT(0.0)KR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,m:Oxidized methionine PHF14 109152.4 8 24 126.1 543.2 HUMAN 1 16.4004 6.73 ECELLGHSKNIRTVV-p P49411;S296-p ECELLGHSKNIRTVV 0.89652816320496 0.131743739580025 0.024 0.165 0.930088619875211 11.6056192887939 0.024 0.165 0.807218558398341 0.069093639725794 0.256248771931076 2.2614863362662 P49411 TUFM P49411.S296.p_TUFM P49411_S296s _1_1_296_296 P49411 P49411 Elongation factor Tu, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10446.10446.4 15.46 9.12 99 1 1 1 0 535.7825 2060.1413 S296s TMT10 286 (K) KGDECELLGHsK (N) KGDECELLGHS(1.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TUFM 49883 1 2 2716.1 72.95 HUMAN 1 0.9301 11.6056 ECEMTKSSPLKITLF-p Q9NQW6;S518-p ECEMTKSSPLKITLF 0.101232677965616 0.0039164475664211 1.25933333333333 -1.78333333333333 21.0237032962979 35.5037309755524 1.25933333333333 -1.78333333333333 0.00790004691468926 0.000281596272959281 4.10217423565906 -8.28151535335926 Q9NQW6 ANLN Q9NQW6.S518.p_ANLN Q9NQW6_S518s _1_1_518_518 Q9NQW6 Q9NQW6 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30464.30464.3 17.5 12.54 1.108 3 1 1 0 796.4501 2307.3779 S518s TMT10 517 (K) SsPLKITLFLEEDK (S) S(0.0)S(0.99)PLKIT(0.0)LFLEEDK K:TMT10,s:Phosphorylated S ANLN 125566 8 35 68.1 675.08 HUMAN 1 21.0237 -35.5037 ECFWASNS_______-p O96007;S188-p ECFWASNS_______ 0.631291457715949 0.223810378623994 0.07 0.138 3.71876841550348 8.5650487800037 0.07 0.138 0.424739995830941 0.139153816498501 0.8629751408048 1.73247899687037 O96007 MOCS2 O96007.S188.p_MOCS2 O96007_S188s _1_1_188_188 O96007 O96007 Molybdopterin synthase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20430.20430.2 10.65 10.65 2.362 2 1 1 0 655.2609 1229.5458 S188s TMT10 181 (K) ECFWASNs (-) ECFWAS(0.0)NS(0.99) C:Carbamidomethylation,s:Phosphorylated S MOCS2 21171.8 2 2 3231.1 56.51 HUMAN 1 3.7188 8.565 ECGDTALSSDEEDLS-p Q6P4R8;S209-p ECGDTALSSDEEDLS 0.285915882712604 0.023133877435803 0.206666666666667 0.477666666666667 10.2604584857356 22.3301247949071 0.206666666666667 0.477666666666667 0.0941790166258726 0.00584773280390641 2.02699954967501 4.39309574526929 Q6P4R8 NFRKB Q6P4R8.S209.p_NFRKB Q6P4R8_S209sS210s_2_2_209_210 Q6P4R8 Q6P4R8 Nuclear factor related to kappa-B-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27308.27308.3 17.91 15.22 3.246 7 2 2 0 1161.8228 3323.5423 S209s S210s Hydrogen 198 (R) EVKEECGDTALssDEEDLSSWLPSSPAR (S) EVKEECGDT(0.0)ALS(0.99)S(0.99)DEEDLS(0.0)S(0.0)WLPS(0.0)S(0.0)PAR K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S NFRKB 139455.1 1 10 791.1 224.91 HUMAN 1 10.2605 22.3301 ECKQLSESQVKSLCE-p P67775;S26-p ECKQLSESQVKSLCE 0.938121433931205 0.120732779557619 -0.0123333333333333 -0.196666666666667 0.540571704804309 12.1052394454748 -0.0123333333333333 -0.196666666666667 0.88296365952345 0.0615851573598106 -0.154301668836103 -2.34983054061807 P67775 PPP2CA P67775.S26.p_PPP2CA P67775_S26s _1_1_26_26 P67775 P67775|P67775-2 Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11142.11142.2 12.37 3.7 2.18 2 1 1 0 728.895 1376.815 S26s TMT10 22 (K) QLSEsQVK (S) QLS(0.0)ES(0.99)QVK K:TMT10,s:Phosphorylated S PPP2CA 36164.1 1 2 5502.1 18.74 HUMAN 1 -0.5406 -12.1052 ECLGRLDSLPEHEDS-p Q8TDY2;S222-p ECLGRLDSLPEHEDS 0.17909935093331 0.0434398530557975 -0.354 0.287666666666667 14.7505085273744 18.251843255951 -0.354 0.287666666666667 0.0334926219427888 0.0149560075047073 -2.83178849717009 3.51048922354724 Q8TDY2 RB1CC1 Q8TDY2.S222.p_RB1CC1 Q8TDY2_S222s _1_1_222_222 Q8TDY2 Q8TDY2|Q8TDY2-2 RB1-inducible coiled-coil protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11230.11230.5 14.75 12.15 3.454 4 1 1 0 619.899 3015.4995 S222s TMT10 211 (R) HSYRECLGRLDsLPEHEDSEK (A) HS(0.0)Y(0.0)RECLGRLDS(0.99)LPEHEDS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RB1CC1 185198.6 2 2 707.1 238.96 HUMAN 1 -14.7505 18.2518 ECLKALGYMERAAES-p Q9Y5Q9;Y471-p ECLKALGYMERAAES 0.0719549135296335 0.0012092853784901 -0.48 -1.24866666666667 24.6303161935321 47.9714763336257 -0.48 -1.24866666666667 0.00344324860848363 1.59533673886288e-05 -4.95075246448169 -14.3712508093099 Q9Y5Q9 GTF3C3 Q9Y5Q9.Y471.p_GTF3C3 Q9Y5Q9_Y471y _1_1_471_471 Q9Y5Q9 Q9Y5Q9 General transcription factor 3C polypeptide 3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.13504.13607.2 13.14 3.63 99 1 1 1 0 574.7712 1068.5709 Y471y TMT10 468 (K) ALGyMER (A) ALGY(1.0)MER y:Phosphorylated Y GTF3C3 102069.2 3 1 268.1 13.14 HUMAN 1 -24.6303 -47.9715 ECLNKRNSEVAVMDK-p Q13625-3;S302-p ECLNKRNSEVAVMDK 0.023066215018463 0.0445689985326577 -0.769 -0.372 37.8992687459655 18.0863041275645 -0.769 -0.372 0.000162208319662128 0.015537086630259 -9.24537163136566 -3.47688900631869 Q13625 TP53BP2 Q13625.3.S302.p_TP53BP2 Q13625-3_S302s _1_1_302_302 Q13625-3 Q13625-3|Q13625-2 Isoform 3 of Apoptosis-stimulating of p53 protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9865.9865.3 9.64 9.64 99 1 1 1 0 562.9606 1606.8987 S302s TMT10 300 (K) RNsEVAVMDK (R) RNS(1.0)EVAVMDK K:TMT10,s:Phosphorylated S TP53BP2 127005.7 1 2 834.1 215.28 HUMAN 1 -37.8993 -18.0863 ECLPSMPSPAGSQEL-p O15231-3;S269-p ECLPSMPSPAGSQEL 0.21279799378029 0.0398035351949174 0.244333333333333 0.355 12.9688604439608 18.7777835449665 0.244333333333333 0.355 0.0504793734264799 0.0132501759550603 2.50545725288025 3.6182952585149 O15231 ZNF185 O15231.3.S269.p_ZNF185 O15231-3_S269s _1_1_269_269 O15231-3 O15231-6|O15231-3 Isoform 3 of Zinc finger protein 185 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31443.31443.3 15.58 15.58 1.144 5 1 1 0 909.1079 2645.3265 S269s TMT10 258 (R) AIWIECLPSMPsPAGSQELSSR (G) AIWIECLPS(0.0)MPS(0.99)PAGS(0.0)QELS(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S ZNF185 74524.1 2 8 166.1 494.62 HUMAN 1 12.9689 18.7778 ECLSLAYSGKLVSPK-p Q9NP71;S98-p ECLSLAYSGKLVSPK 0.785455683100309 0.0294212633715952 -0.0516666666666667 0.277333333333333 2.0205044260974 20.7265886110306 -0.0516666666666667 0.277333333333333 0.627985415075289 0.00845943073666803 -0.513338119015142 4.032698680587 Q9NP71 MLXIPL Q9NP71.S98.p_MLXIPL Q9NP71_S98s _1_1_98_98 Q9NP71 Q9NP71|Q9NP71-3|Q9NP71-2|Q9NP71-4|Q9NP71-6|A0A0C4DG26|Q9NP71-5 Carbohydrate-responsive element-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30434.30434.3 16.04 17.35 3.554 3 1 1 0 642.6665 1846.0185 S98s TMT10 89 (R) LFECLSLAYsGK (L) LFECLS(0.0)LAY(0.0)S(0.99)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MLXIPL 93755.5 1 5 1023.1 187.4 HUMAN 1 -2.0205 20.7266 ECLSREGSPIPHDPE-p P85037;S445-p ECLSREGSPIPHDPE 0.414584402161289 0.919147982676606 -0.150333333333333 0.012 7.05739088433635 0.516002789540539 -0.156199473138456 0.012 0.196906889408662 0.887972918966862 -1.47105549141896 0.147625340948294 P85037 FOXK1 P85037.S445.p_FOXK1 P85037_S445s _1_1_445_445 P85037 P85037|P85037-2 Forkhead box protein K1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14510.14510.2 17.59 17.59 6.78 2 1 1 0 1018.0001 1955.0275 S445s TMT10 443 (R) EGsPIPHDPEFGSK (L) EGS(0.99)PIPHDPEFGS(0.0)K K:TMT10,s:Phosphorylated S FOXK1 75912.4 10 11 686.1 243.66 HUMAN 1 -7.0574 0.516 ECNSNRDSVLSYTSV-p Q8TCU6;S1179-p ECNSNRDSVLSYTSV 0.370851613276491 0.870178827682206 0.178666666666667 0.0216666666666667 7.98797505047872 0.851204602916554 0.178666666666667 0.0216666666666667 0.158928760005855 0.822014616070514 1.63307452452838 0.236103788752051 Q8TCU6 PREX1 Q8TCU6.S1179.p_PREX1 Q8TCU6_S1179s _1_1_1179_1179 Q8TCU6 Q8TCU6|Q8TCU6-3|Q8TCU6-2 Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13442.13442.3 15.92 8.89 2.648 9 1 1 0 883.3902 2568.1834 S1179s TMT10 1168 (R) DSYSECNSNRDsVLSYTSVR (S) DS(0.0)Y(0.0)S(0.0)ECNS(0.0)NRDS(0.99)VLS(0.0)Y(0.0)T(0.0)S(0.0)VR C:Carbamidomethylation,s:Phosphorylated S PREX1 188881.6 1 11 379.1 336 HUMAN 1 7.988 0.8512 ECPELLGSAFRKVKY-p E1CEI4;S583-p ECPELLGSAFRKVKY 0.232221202833204 0.00333122814740401 0.177 0.638666666666667 12.195560154627 37.071343682176 0.177 0.638666666666667 0.0603175905058163 0.000196275291840769 2.36707027101251 8.88896481677812 E1CEI4 GCLC E1CEI4.S583.p_GCLC E1CEI4_S583s_1_1_583_583 E1CEI4 P48506|E1CEI4 Glutamate--cysteine ligase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25471.25471.5 18.45 18.45 5.852 1 1 1 0 610.4971 2967.4891 N572n S583s TMT10 567 (K) CNQIAnELCECPELLGsAFRK (V) CN(0.0)QIAN(0.99)ELCECPELLGS(1.0)AFRK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S GCLC 69370.5 2 2 3953.1 40.31 HUMAN 1 12.1956 37.0713 ECRPRVLTIDPTEFK-p P53621-2;T600-p ECRPRVLTIDPTEFK 0.100836084809211 0.0406155377946993 -0.450666666666667 -0.342333333333333 21.0789455069339 18.6506233603851 -0.450666666666667 -0.342333333333333 0.00780019480943423 0.0136438728652384 -4.11442554805982 -3.59208116115846 P53621 COPA P53621.2.T600.p_COPA P53621-2_T600t _1_1_600_600 P53621-2 P53621-2 Isoform 2 of Coatomer subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28294.28294.3 10.74 10.74 2.281 2 1 1 0 567.648 1620.9613 T600t TMT10 598 (R) VLtIDPTEFK (F) VLT(0.99)IDPT(0.0)EFK K:TMT10,t:Phosphorylated T COPA 140918.9 4 7 545.1 275.81 HUMAN 1 -21.0789 -18.6506 ECRSDPESPIKKTSL-p Q8NDI1;S751-p ECRSDPESPIKKTSL 0.186317782283684 0.00407764807027897 -0.226 -0.649666666666667 14.3420787523607 35.1917461385052 -0.226 -0.649666666666667 0.036795281071836 0.000302569666207807 -2.75594394246452 -8.1650706150113 Q8NDI1 EHBP1 Q8NDI1.S751.p_EHBP1 Q8NDI1_S751s _1_1_751_751 Q8NDI1 Q8NDI1|Q8NDI1-2|Q8NDI1-3 EH domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9912.9912.4 12.98 7.17 2.629 3 1 1 0 604.0738 2333.3102 S751s TMT10 742 (R) SLECRSDPEsPIKK (T) S(0.0)LECRS(0.0)DPES(0.99)PIKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EHBP1 140642.4 9 11 285.1 385.52 HUMAN 1 -14.3421 -35.1917 ECRSQPRSISESFLT-p F5H527;S63-p ECRSQPRSISESFLT 0.698700102955885 0.00985022343060253 -0.0833333333333334 -0.534333333333333 2.92688091434603 28.2333415079767 -0.0833333333333333 -0.534333333333333 0.509696801847406 0.00150198587747004 -0.705521453519235 -5.90346987357327 F5H527 SSH2 F5H527.S63.p_SSH2 F5H527_S63s _1_1_63_63 F5H527 F5H527|Q76I76|Q76I76-4|Q76I76-3|J3KSQ9 Protein phosphatase Slingshot homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25526.25526.2 9.15 9.15 2.224 4 1 1 0 824.9499 1568.93 S63s TMT10 63 (R) sISESFLTVK (G) S(0.99)IS(0.0)ES(0.0)FLT(0.0)VK K:TMT10,s:Phosphorylated S SSH2 162969.8 3 1 998.1 190.13 HUMAN 1 -2.9269 -28.2333 ECSLIASSPEENWPA-p Q9ULH0-4;S1643-p ECSLIASSPEENWPA 0.651183474642633 0.962872227289093 0.0856666666666667 0.00600000000000002 3.49238554724364 0.234277187984198 0.0856666666666667 0.00600000000000003 0.447467446123045 0.947484864715577 0.818763649458665 0.0689710793269175 Q9ULH0 KIDINS220 Q9ULH0.4.S1643.p_KIDINS220 Q9ULH0-4_S1642sS1643s_2_2_1642_1643 Q9ULH0-4 Q9ULH0|Q9ULH0-4|Q9ULH0-2|Q9ULH0-5 Isoform 4 of Kinase D-interacting substrate of 220 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20496.20496.4 11.18 11.18 11.184 5 2 2 0 839.1462 3192.6272 S1642s S1643s N1647n TMT10 1632 (K) KSPSECSLIAssPEEnWPACQK (A) KS(0.0)PS(0.0)ECS(0.0)LIAS(0.99)S(0.99)PEEN(1.0)WPACQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated KIDINS220 196163.1 1 26 306.1 373.6 HUMAN 1 3.4924 0.2343 ECTIRGRSLIQISIQ-p Q8TCU6;S1272-p ECTIRGRSLIQISIQ 0.168564014565958 0.368200760702451 -0.23 0.0933333333333334 15.4379087399215 5.7537656897149 -0.23 0.0933333333333334 0.0285896689152315 0.265841899264507 -2.96099195028364 1.24028825665158 Q8TCU6 PREX1 Q8TCU6.S1272.p_PREX1 Q8TCU6_S1272s _1_1_1272_1272 Q8TCU6 Q8TCU6|Q8TCU6-3|Q8TCU6-2 Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.29922.29922.3 20.86 20.73 2.516 3 1 1 0 982.8632 2866.6191 S1272s TMT10 1270 (R) GRsLIQISIQEDPWNLPNSIK (T) GRS(0.99)LIQIS(0.0)IQEDPWNLPNS(0.0)IK K:TMT10,s:Phosphorylated S PREX1 188881.6 6 15 379.1 336 HUMAN 1 -15.4379 5.7538 ECVRMDRTPPPPTLS-p Q8NDX5-7;T621-p ECVRMDRTPPPPTLS 0.270564475154485 0.470242764489693 0.168 0.0806666666666667 10.7595499866062 4.36804274145915 0.168 0.0806666666666667 0.0839546975377411 0.365759593337732 2.11403582396019 0.986680780124592 Q8NDX5 PHC3 Q8NDX5.7.T621.p_PHC3 Q8NDX5-7_T621t _1_1_621_621 Q8NDX5-7 Q8NDX5-7|Q8NDX5-2|E7EX82 Isoform 7 of Polyhomeotic-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19166.19583.3 22.21 21.84 6.773 4 1 1 0 762.7342 2206.2215 T621t TMT10 618 (R) MDRtPPPPTLSPAAITVGR (G) MDRT(0.99)PPPPT(0.0)LS(0.0)PAAIT(0.0)VGR t:Phosphorylated T PHC3 108276.8 27 10 439.1 312.22 HUMAN 1 10.7595 4.368 EDAAGGDSASEEKSG-p Q9NWN3;S519-p EDAAGGDSASEEKSG 0.459789101780259 0.196057108702102 -0.139333333333333 0.181666666666667 6.22121067113936 9.30799573399257 -0.139333333333333 0.181666666666667 0.238714573190425 0.117273645773967 -1.32387631291747 1.86099785497102 Q9NWN3 FBXO34 Q9NWN3.S519.p_FBXO34 Q9NWN3_S519s _1_1_519_519 Q9NWN3 Q9NWN3 F-box only protein 34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13021.13021.3 21.32 21.32 3 5 1 1 0 879.0643 2555.1997 S519s TMT10 504 (K) ESSEASQLEDAAGGDsASEEK (S) ES(0.0)S(0.0)EAS(0.0)QLEDAAGGDS(0.99)AS(0.0)EEK K:TMT10,s:Phosphorylated S FBXO34 80250.1 1 1 4758.1 26.97 HUMAN 1 -6.2212 9.308 EDAASLGSQKGGITK-p Q9BZ29-4;S170-p EDAASLGSQKGGITK 0.247942065088286 0.0398604091984123 -0.258333333333333 0.288333333333333 11.5700726762145 18.7656142857009 -0.258333333333333 0.288333333333333 0.0696614856639524 0.0132873560147856 -2.25630124621701 3.61578239403117 Q9BZ29 DOCK9 Q9BZ29.4.S170.p_DOCK9 Q9BZ29-4_S167sS170s_2_2_167_170 Q9BZ29-4 A0A0A0MSY4|Q9BZ29-4|A0A088AWN3|Q9BZ29-5|Q9BZ29-3 Isoform 4 of Dedicator of cytokinesis protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22459.22459.5 16.31 9.58 1.103 4 2 2 0 861.8428 4145.2424 S167s S170s TMT10 148 (K) LPVHVYEVDEEVDKDEDAAsLGsQKGGITK (H) LPVHVY(0.0)EVDEEVDKDEDAAS(0.99)LGS(0.99)QKGGIT(0.0)K K:TMT10,s:Phosphorylated S DOCK9 241123.4 1 6 1592.1 129.29 HUMAN 1 -11.5701 18.7656 EDADGAGSPSDWASP-p O60347;S187-p EDADGAGSPSDWASP 0.271002123051664 0.298251139427851 0.197333333333333 0.168333333333333 10.7464677098991 6.9356650778334 0.197333333333333 0.168333333333333 0.0842079760222095 0.202503946887735 2.1117495527098 1.44935022212526 O60347 TBC1D12 O60347.S187.p_TBC1D12 O60347_S187s _1_1_187_187 O60347 O60347 TBC1 domain family member 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27743.27743.3 16.16 16.16 1.151 3 1 1 0 1111.1836 3251.5654 S187s TMT10 172 (R) LRLEGPGDEDADGAGsPSDWASPLEDPLR (S) LRLEGPGDEDADGAGS(0.99)PS(0.0)DWAS(0.0)PLEDPLR s:Phosphorylated S TBC1D12 86422.8 1 3 2018.1 102.13 HUMAN 1 10.7465 6.9357 EDADQEVSPDRADPE-p Q9UBT2;S207-p EDADQEVSPDRADPE 0.365755403490374 0.228315832237248 0.142333333333333 0.125666666666667 8.10728703326313 8.4492295808838 0.142333333333333 0.125666666666667 0.154622003632788 0.142914746043549 1.65376707222904 1.71243960855532 Q9UBT2 UBA2 Q9UBT2.S207.p_UBA2 Q9UBT2_S207s _1_1_207_207 Q9UBT2 Q9UBT2|Q9UBT2-2 SUMO-activating enzyme subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32214.32214.4 32.14 32.14 13.798 3 1 1 0 1076.9855 4224.9472 S207s TMT10 191 (K) YLFNQLFGEEDADQEVsPDRADPEAAWEPTEAEAR (A) Y(0.0)LFNQLFGEEDADQEVS(0.99)PDRADPEAAWEPT(0.0)EAEAR s:Phosphorylated S UBA2 71792.9 3 1 1633.1 125.05 HUMAN 1 8.1073 8.4492 EDAEAEDTPRKRLRT-p O96028-3;T544-p EDAEAEDTPRKRLRT 0.568629005692661 0.0014286003693118 0.082 -1.10933333333333 4.51087377211367 46.0033663927484 0.082 -1.10933333333333 0.353926126296223 2.50994012084393e-05 1.01360811255615 -13.1916756670413 O96028 WHSC1 O96028.3.T544.p_WHSC1 O96028-3_T544t _1_1_544_544 O96028-3 O96028|O96028-3 Isoform 3 of Histone-lysine N-methyltransferase NSD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8184.8184.4 18.02 12.12 5.545 2 1 1 0 628.0639 2429.2673 T544t TMT10 531 (K) RIQDPTEDAEAEDtPRK (R) RIQDPT(0.0)EDAEAEDT(0.99)PRK K:TMT10,t:Phosphorylated T NSD2 72093.4 9 12 410.1 322.95 HUMAN 1 4.5109 -46.0034 EDAFIVISDSDGEEP-p Q96RL1;S44-p EDAFIVISDSDGEEP 0.65433586681374 0.027268123354085 0.0643333333333333 0.3 3.4522134426557 21.2182119188844 0.0643333333333333 0.3 0.451625708340526 0.00755403178919266 0.810856081583064 4.14122723490256 Q96RL1 UIMC1 Q96RL1.S44.p_UIMC1 Q96RL1_S44s _1_1_44_44 Q96RL1 Q96RL1|Q96RL1-2|D6RCQ3|Q96RL1-5 BRCA1-A complex subunit RAP80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22247.22247.4 22.37 17.54 2.462 2 1 1 0 897.2117 3505.8629 S44s TMT10 35 (R) RLEDAFIVIsDSDGEEPKEENGLQK (T) RLEDAFIVIS(0.99)DS(0.0)DGEEPKEENGLQK K:TMT10,s:Phosphorylated S UIMC1 80924.2 4 1 339.1 354.34 HUMAN 1 3.4522 21.2182 EDAFLDDSHGDQALS-p Q8NE35-2;S400-p EDAFLDDSHGDQALS 0.898002110206447 0.278176101053789 -0.033 0.117 0.916532751053064 7.32160203223089 -0.033 0.117 0.809742109793255 0.185284801588327 -0.252808477854585 1.51676025182722 Q8NE35 CPEB3 Q8NE35.2.S400.p_CPEB3 Q8NE35-2_S400s _1_1_400_400 Q8NE35-2 Q8NE35-2 Isoform 2 of Cytoplasmic polyadenylation element-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33242.33242.3 26.67 26.67 7.475 8 1 1 0 1131.526 3312.5858 S400s TMT10 387 (R) SSLFPFEDAFLDDsHGDQALSSGLSSPTR (C) S(0.0)S(0.0)LFPFEDAFLDDS(0.99)HGDQALS(0.0)S(0.0)GLS(0.0)S(0.0)PT(0.0)R s:Phosphorylated S CPEB3 75066.7 2 3 2497.1 81.21 HUMAN 1 -0.9165 7.3216 EDAIPEESGDEDEDD-p Q13547;S393-p EDAIPEESGDEDEDD 0.563005808318766 0.107375173941846 0.076 0.181666666666667 4.59458141963434 12.7983091324042 0.076 0.181666666666667 0.347169735081383 0.0525011826810417 1.02920982539183 2.47345405086294 Q13547 HDAC1 Q13547.S393.p_HDAC1 Q13547_S393s _1_1_393_393 Q13547 Q13547 Histone deacetylase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20998.20998.5 24.82 24.82 6.95 4 1 1 0 1089.9249 5365.623 S393s TMT10 372 (R) MLPHAPGVQMQAIPEDAIPEEsGDEDEDDPDKRISICSSDKR (I) MLPHAPGVQMQAIPEDAIPEES(0.99)GDEDEDDPDKRIS(0.0)ICS(0.0)S(0.0)DKR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S HDAC1 55672.5 38 3 700.1 240.49 HUMAN 1 4.5946 12.7983 EDALLYQSKGYNDDY-p P50402;S87-p EDALLYQSKGYNDDY 0.502987453497002 0.489843879097225 -0.235 -0.0996666666666666 5.50575062729331 4.14396553775485 -0.235 -0.0996666666666667 0.281465349310406 0.385126538482618 -1.19598537017107 -0.944386417440176 P50402 EMD P50402.S87.p_EMD P50402_S87s _1_1_87_87 P50402 P50402|Q5HY57 Emerin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14988.14988.3 16.11 16.11 4.353 2 1 1 0 654.7016 1882.1253 S87s TMT10 79 (K) KEDALLYQsK (G) KEDALLY(0.0)QS(0.99)K K:TMT10,s:Phosphorylated S EMD 29050.4 4 4 483.1 297.25 HUMAN 1 -5.5058 -4.144 EDALSGDSDVDTAST-p J3KQR7;S955-p EDALSGDSDVDTAST 0.148266672319898 0.885150204505266 -0.267 -0.02 16.7793774426565 0.744715488918278 -0.267 -0.0199999999999999 0.0209924078638763 0.842419577461856 -3.21930667902495 -0.208537370516785 J3KQR7 NotFound J3KQR7.S955.p_NotFound J3KQR7_S952sS955s_2_2_952_955 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24305.24305.4 30.65 30.65 4.893 10 2 2 0 1074.2305 4133.9618 S952s S955s TMT10 929 (R) LLSNSVDAECEGGSTPRPPEDALsGDsDVDTASTVSLR (S) LLS(0.0)NS(0.0)VDAECEGGS(0.0)T(0.0)PRPPEDALS(0.99)GDS(0.99)DVDT(0.0)AS(0.0)T(0.0)VS(0.0)LR C:Carbamidomethylation,s:Phosphorylated S CEP170B 172326.6 3 38 51.1 746.11 HUMAN 1 -16.7794 -0.7447 EDAMKTPSPAAEDAR-p Q92797;S1259-p EDAMKTPSPAAEDAR 0.263054148508799 0.418238952665515 0.163333333333333 -0.127 11.0024372994271 5.03797506234338 0.163333333333333 -0.127 0.0793882575688983 0.313474698801695 2.15653634439215 -1.11078676130672 Q92797 SYMPK Q92797.S1259.p_SYMPK Q92797_S1259s _1_1_1259_1259 Q92797 Q92797 Symplekin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16342.16342.4 10.69 10.69 1.164 4 1 1 0 940.9849 3680.9409 S1259s TMT10 1243 (R) SPQTLAPVGEDAMKTPsPAAEDAREPEAK (G) S(0.0)PQT(0.0)LAPVGEDAMKT(0.0)PS(0.99)PAAEDAREPEAK K:TMT10,s:Phosphorylated S SYMPK 142001.7 5 10 808.1 221.39 HUMAN 1 11.0024 -5.038 EDANSEKSINEENGE-p Q13523;S23-p EDANSEKSINEENGE 0.539805799310612 0.0111354218815931 -0.14 0.494666666666667 4.94524219707367 27.356199646769 -0.14 0.494666666666667 0.320240149832365 0.00183814613468808 -1.09401381933955 5.65842014442995 Q13523 PRPF4B Q13523.S23.p_PRPF4B Q13523_S23s_1_1_23_23 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14670.14670.4 23.59 21.93 1.22 6 1 1 0 1201.547 4722.1961 S23s N28n Acetyl 2 (M) AAAETQSLREQPEMEDANSEKsINEEnGEVSEDQSQNK (H) AAAET(0.0)QS(0.0)LREQPEMEDAN(0.0)S(0.0)EKS(0.99)IN(0.0)EEN(0.99)GEVS(0.0)EDQS(0.0)QN(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated PRPF4B 117327.1 19 1 70.1 666.55 HUMAN 1 -4.9452 27.3562 EDAPFQHSPLGKAAG-p O60318;S538-p EDAPFQHSPLGKAAG 0.579333580946327 0.00473926529764594 0.0933333333333333 -0.619333333333333 4.35903351378158 33.996733073729 0.0933333333333333 -0.619333333333333 0.366519131354359 0.000398406754390312 0.985166635888752 -7.73207983229147 O60318 MCM3AP O60318.S538.p_MCM3AP O60318_S538s _1_1_538_538 O60318 O60318 Germinal-center associated nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13698.13698.4 24.35 20.53 12.552 4 1 1 0 909.2311 3553.9308 S538s TMT10 518 (K) EKKPGDGEVSPSTEDAPFQHsPLGK (A) EKKPGDGEVS(0.0)PS(0.0)T(0.0)EDAPFQHS(0.99)PLGK K:TMT10,s:Phosphorylated S MCM3AP 220797 4 6 653.1 254.06 HUMAN 1 4.359 -33.9967 EDAQKSSSPAPADIA-p Q13283;S232-p EDAQKSSSPAPADIA 0.259441883712572 0.853349989861476 -0.383 -0.137333333333333 11.1178127713486 0.96982272921223 -0.383 -0.137333333333333 0.0773069826688444 0.799866903393817 -2.1767620933737 -0.26626543255194 Q13283 G3BP1 Q13283.S232.p_G3BP1 Q13283_S232s _1_1_232_232 Q13283 Q13283 Ras GTPase-activating protein-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.36899.36899.3 18.95 10.72 1.105 9 1 1 0 1173.2584 3437.7953 S232s TMT10 230 (K) SSsPAPADIAQTVQEDLRTFSWASVTSK (N) S(0.0)S(0.0)S(0.99)PAPADIAQT(0.0)VQEDLRT(0.0)FS(0.0)WAS(0.0)VT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S G3BP1 52220.4 2 6 1003.1 189.39 HUMAN 1 -11.1178 -0.9698 EDAVATDSSPEELEA-p Q9BQK8-2;S161-p EDAVATDSSPEELEA 0.94478758147709 0.337687928607312 -0.0118333333333333 0.0983333333333333 0.484256200163769 6.24564799384733 -0.0118333333333333 0.0983333333333333 0.894487714363608 0.23737512181556 -0.138985634610105 1.32787999374028 Q9BQK8 LPIN3 Q9BQK8.2.S161.p_LPIN3 Q9BQK8-2_S161sS162s_2_2_161_162 Q9BQK8-2 Q9BQK8-2 Isoform 2 of Phosphatidate phosphatase LPIN3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24672.24672.3 20.38 18.96 3.272 5 2 2 0 1269.6096 3646.879 S161s S162s TMT10 152 (K) QKEDAVATDssPEELEAGAESELSLPEK (L) QKEDAVAT(0.0)DS(0.99)S(0.99)PEELEAGAES(0.0)ELS(0.0)LPEK K:TMT10,s:Phosphorylated S LPIN3 94213.1 1 8 1554.1 131.9 HUMAN 2 -0.4843 6.2456 EDAVHEDSGDEDGED-p Q92769;S394-p EDAVHEDSGDEDGED 0.950248314672648 0.934488500334619 0.00999999999999999 0.00833333333333334 0.438575836452561 0.415587774669099 0.00999999999999999 0.00833333333333334 0.903945852269117 0.908743301315869 0.126444189124133 0.120080789440343 Q92769 HDAC2 Q92769.S394.p_HDAC2 Q92769_S394s _1_1_394_394 Q92769 Q92769|Q92769-3 Histone deacetylase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18138.18138.4 27 27 99 1 1 1 0 1031.7263 4043.9115 S394s TMT10 373 (R) MLPHAPGVQMQAIPEDAVHEDsGDEDGEDPDKR (I) MLPHAPGVQMQAIPEDAVHEDS(1.0)GDEDGEDPDKR K:TMT10,s:Phosphorylated S HDAC2 55933.8 45 9 700.2 240.49 HUMAN 1 0.4386 0.4156 EDCFESESEDEFYKQ-p Q96D09;S330-p EDCFESESEDEFYKQ 0.260885776154092 0.280783903733521 -0.211666666666667 0.211666666666667 11.0532137001294 7.26942574008351 -0.211666666666667 0.211666666666667 0.0784654789464787 0.187524245166905 -2.16543456011107 1.50766448969397 Q96D09 GPRASP2 Q96D09.S330.p_GPRASP2 Q96D09_S328sS330s_2_2_328_330 Q96D09 Q96D09 G-protein coupled receptor-associated sorting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15909.15909.3 15.17 15.17 7.798 4 2 2 0 858.6607 2414.0292 S328s S330s Hydrogen 320 (R) TNREDCFEsEsEDEFYK (Q) T(0.0)NREDCFES(0.99)ES(0.99)EDEFY(0.0)K C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S GPRASP2 94342.1 4 7 1724.1 119.44 HUMAN 1 -11.0532 7.2694 EDDDDRVSPTVLHKM-p Q9NPB8;S175-p EDDDDRVSPTVLHKM 0.93285358140112 0.692557880990475 0.0136666666666667 0.0426666666666667 0.595473442654112 2.18929785687801 0.0136666666666667 0.0426666666666667 0.871871849694181 0.604046280319546 0.169083615324782 0.550260788198828 Q9NPB8 GPCPD1 Q9NPB8.S175.p_GPCPD1 Q9NPB8_S175s _1_1_175_175 Q9NPB8 Q9NPB8 Glycerophosphocholine phosphodiesterase GPCPD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22547.22547.4 15.98 11.7 1.161 3 1 1 0 730.6235 2839.5089 S175s TMT10 161 (K) LTLEGLEEDDDDRVsPTVLHK (M) LT(0.0)LEGLEEDDDDRVS(0.99)PT(0.0)VLHK K:TMT10,s:Phosphorylated S GPCPD1 76946.3 2 1 4247.1 34.74 HUMAN 1 0.5955 2.1893 EDDDEDDSDDSEAEK-p Q9Y2W2;S361-p EDDDEDDSDDSEAEK 0.871044768133441 0.044246843681853 0.037 0.352333333333333 1.17359636856327 18.1321894032124 0.037 0.352333333333333 0.763203517217965 0.0153737940779804 0.316873763841752 3.48618691178376 Q9Y2W2 WBP11 Q9Y2W2.S361.p_WBP11 Q9Y2W2_S361sS364s_2_2_361_364 Q9Y2W2 Q9Y2W2 WW domain-binding protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19152.19152.5 24.38 24.38 5.478 4 2 2 0 990.8184 4790.1473 S361s S364s TMT10 337 (R) MAGQEIPEEGREVEEFSEDDDEDDsDDsEAEKQSQK (Q) MAGQEIPEEGREVEEFS(0.0)EDDDEDDS(0.99)DDS(0.99)EAEKQS(0.0)QK K:TMT10,s:Phosphorylated S WBP11 69996.4 9 4 1858.1 110.79 HUMAN 2 1.1736 18.1322 EDDDLFSSAKSQPLV-p Q641Q2;S890-p EDDDLFSSAKSQPLV 0.141525291296506 0.0138502236241787 -0.520333333333333 0.379 17.3607974702072 25.8050459104359 -0.520333333333333 0.379 0.0183620114123878 0.00262721375333998 -3.33403827314697 5.24378127555758 Q641Q2 FAM21A Q641Q2.S890.p_FAM21A Q641Q2_S890s _1_1_890_890 Q641Q2 Q641Q2|A0A0A0MR88 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36222.36222.4 18.38 18.38 1.108 4 1 1 0 749.3615 2914.461 S890s TMT10 870 (K) LLEPSVGSLFGDDEDDDLFSsAK (S) LLEPS(0.0)VGS(0.0)LFGDDEDDDLFS(0.0)S(0.99)AK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 1 48 12.1 1178.3 HUMAN 1 -17.3608 25.805 EDDEDEGSGSDEDEN-p A0A0U1RRH6;S244-p EDDEDEGSGSDEDEN 0.513311363016096 0.0390921366602911 -0.15 0.417666666666667 5.35244570456295 18.903051233584 -0.15 0.417666666666667 0.291578454416308 0.0128734478086014 -1.16827135825599 3.64421376113971 A0A0U1RRH6 NotFound A0A0U1RRH6.S244.p_NotFound A0A0U1RRH6_S232sS244sS246s_3_3_232_246 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7777.7777.5 23.93 23.93 2.124 8 3 3 0 1124.2186 5376.1597 S232s S244s S246s N251n TMT10 225 (R) SASQKEGsDGDNEDDEDEGsGsDEDEnDEGNDEDHSSPASEGGCK (K) S(0.0)AS(0.0)QKEGS(0.99)DGDN(0.0)EDDEDEGS(0.99)GS(0.99)DEDEN(0.99)DEGN(0.0)DEDHS(0.0)S(0.0)PAS(0.0)EGGCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated PHF14 109152.4 1 27 126.1 543.2 HUMAN 1 -5.3524 18.9031 EDDEKSDSEGGDLDK-p Q9NU22;S4754-p EDDEKSDSEGGDLDK 0.246495783528647 0.0113226331113857 -0.475666666666667 0.481333333333333 11.635543027702 27.2461971098945 -0.475666666666667 0.481333333333333 0.068619207382101 0.00188529922504699 -2.2678518617496 5.62824126446896 Q9NU22 MDN1 Q9NU22.S4754.p_MDN1 Q9NU22_S4752sS4754s_2_2_4752_4754 Q9NU22 Q9NU22 Midasin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13604.13604.5 24.81 18.8 99 2 2 2 0 737.5144 3523.6109 S4752s S4754s TMT10 4737 (K) MHDGELEEQEEDDEKsDsEGGDLDK (H) MHDGELEEQEEDDEKS(1.0)DS(1.0)EGGDLDK K:TMT10,s:Phosphorylated S MDN1 638399.7 4 10 905.1 202.58 HUMAN 1 -11.6355 27.2462 EDDLEMSSDASDASG-p P35269;S218-p EDDLEMSSDASDASG 0.683208662620214 0.00855566836817945 0.056 0.511666666666667 3.10127749462889 29.3335889187304 0.056 0.511666666666667 0.489634770152627 0.00116584578830554 0.740908889348689 6.22232570453926 P35269 GTF2F1 P35269.S218.p_GTF2F1 P35269_S217sS218sS221s_3_3_217_221 P35269 P35269 General transcription factor IIF subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19834.20605.4 21.25 21.25 2.321 4 3 3 0 894.1264 3317.5844 M216m S217s S218s S221s TMT10 207 (R) IHDLEDDLEmssDAsDASGEEGGRVPK (A) IHDLEDDLEM(1.0)S(0.99)S(0.99)DAS(0.99)DAS(0.0)GEEGGRVPK K:TMT10,m:Oxidized methionine,s:Phosphorylated S GTF2F1 58296.5 10 17 1159.1 171.17 HUMAN 1 3.1013 29.3336 EDDTLDNTFSEELEK-p Q5VT06;T2689-p EDDTLDNTFSEELEK 0.515813402472715 0.0210682349527345 -0.103 -0.433 5.30876038526411 22.9263251702134 -0.103 -0.433 0.294526218544134 0.00509762029277949 -1.16035105734071 -4.53197755939149 Q5VT06 CEP350 Q5VT06.T2689.p_CEP350 Q5VT06_T2689t _1_1_2689_2689 Q5VT06 Q5VT06 Centrosome-associated protein 350 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27213.27213.3 21.17 21.17 2.833 4 1 1 0 922.114 2684.3555 T2689t TMT10 2677 (K) VSIAAEDDTLDNtFSEELEK (Q) VS(0.0)IAAEDDT(0.0)LDNT(0.99)FS(0.0)EELEK K:TMT10,t:Phosphorylated T CEP350 352521.4 1 22 265.1 395.34 HUMAN 1 -5.3088 -22.9263 EDDTVPLSPLKYMAQ-p Q9UEY8;S423-p EDDTVPLSPLKYMAQ 0.30045641186492 0.0125557733612715 -0.184333333333333 -0.39 9.81842388213129 26.5196691536532 -0.184333333333333 -0.39 0.104269577020366 0.0022286049183423 -1.95018106874689 -5.43192492338084 Q9UEY8 ADD3 Q9UEY8.S423.p_ADD3 Q9UEY8_S423s _1_1_423_423 Q9UEY8 Q9UEY8|Q9UEY8-2 Gamma-adducin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36006.36006.4 22.36 22.36 2.578 6 1 1 0 804.9151 3136.6706 S423s TMT10 402 (K) SDVEIPATVTAFSFEDDTVPLsPLK (Y) S(0.0)DVEIPAT(0.0)VT(0.0)AFS(0.0)FEDDT(0.0)VPLS(0.99)PLK K:TMT10,s:Phosphorylated S ADD3 79495.5 3 22 264.2 396.09 HUMAN 1 -9.8184 -26.5197 EDDVSEGSEVPESDR-p Q6SPF0;S348-p EDDVSEGSEVPESDR 0.164162708749184 0.966075213584248 0.448 0.0133333333333334 15.7178530405396 0.213430597267354 0.448 0.0133333333333333 0.0268049311434277 0.952043824448582 3.01420064829783 0.0629737147944949 Q6SPF0 SAMD1 Q6SPF0.S348.p_SAMD1 Q6SPF0_S345sS348s_2_2_345_348 Q6SPF0 Q6SPF0|E9PIW9 Atherin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12148.12148.5 21.48 21.48 6.317 3 2 2 0 1123.0731 5451.4017 S345s S348s TMT10 325 (R) VLEKEEEEDDDEDEDEEDDVsEGsEVPESDRPAGAQHHQLNGER (G) VLEKEEEEDDDEDEDEEDDVS(0.99)EGS(0.99)EVPES(0.0)DRPAGAQHHQLNGER K:TMT10,s:Phosphorylated S SAMD1 56222 1 5 1432.1 142.81 HUMAN 1 15.7179 0.2134 EDDVYGNSSGRKHRG-p Q8TEQ0;S361-p EDDVYGNSSGRKHRG 0.114002998190606 0.293094622647925 -0.368333333333333 0.13 19.6670138450568 7.03650222528289 -0.368333333333333 0.13 0.0107968884771063 0.197856251777935 -3.80784957997735 1.46699381588309 Q8TEQ0 SNX29 Q8TEQ0.S361.p_SNX29 Q8TEQ0_S361s _1_1_361_361 Q8TEQ0 Q8TEQ0|Q8TEQ0-2|Q8IUI4 Sorting nexin-29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12328.12328.3 13.5 13.5 1.459 4 1 1 0 999.4373 2916.3383 S361s TMT10 344 (K) SIDDEDVDENEDDVYGNsSGRK (H) S(0.0)IDDEDVDENEDDVY(0.0)GNS(0.99)S(0.0)GRK K:TMT10,s:Phosphorylated S SNX29 91651.5 1 5 764.1 229.17 HUMAN 1 -19.667 7.0365 EDEDEDESSEEDSED-p Q5SSJ5;S441-p EDEDEDESSEEDSED 0.674594569293558 0.00463734855393385 -0.199666666666667 0.758 3.20277484238453 34.1447717467511 -0.199666666666667 0.758 0.478324378360612 0.000385055051582509 -0.761305645679402 7.78462043124103 Q5SSJ5 HP1BP3 Q5SSJ5.S441.p_HP1BP3 Q5SSJ5_S441sS442sS446s_3_3_441_446 Q5SSJ5 Q5SSJ5|Q5SSJ5-2|Q5SSJ5-3 Heterochromatin protein 1-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10530.10949.5 19.75 19.75 12.515 4 3 3 0 861.9416 4065.7783 S441s S442s S446s TMT10 426 (K) KEPDDSRDEDEDEDEssEEDsEDEEPPPK (R) KEPDDS(0.0)RDEDEDEDES(0.99)S(0.99)EEDS(0.99)EDEEPPPK K:TMT10,s:Phosphorylated S HP1BP3 61491.1 4 9 1424.1 144.01 HUMAN 1 -3.2028 34.1448 EDEDFYDSDDDTFLD-p A0A087X0M4;S412-p EDEDFYDSDDDTFLD 0.64672362729872 0.815971798347656 0.062 0.0273333333333333 3.54526470288858 1.23588794139354 0.062 0.0273333333333334 0.442052172933679 0.752334895018199 0.829143258772744 0.33201104677185 A0A087X0M4 NotFound A0A087X0M4.S412.p_NotFound A0A087X0M4_S412s _1_1_412_412 A0A087X0M4 Q9BWU0|A0A087X0M4 Kanadaptin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26754.26754.4 23.77 23.77 3.899 4 1 1 0 959.21 3753.8375 S412s TMT10 403 (K) NWEDEDFYDsDDDTFLDRTGLIEKK (R) NWEDEDFY(0.0)DS(0.99)DDDT(0.0)FLDRT(0.0)GLIEKK K:TMT10,s:Phosphorylated S SLC4A1AP 83630.7 16 5 455.1 307.39 HUMAN 1 3.5453 1.2359 EDEEDDSSGEEVVIP-p P19338;S42-p EDEEDDSSGEEVVIP 0.53052591129584 0.0101099102642081 -0.1095 0.619833333333333 5.09552193282867 28.0229422388311 -0.1095 0.619833333333333 0.30934835198854 0.00157654283863141 -1.12153453388445 5.84396628986656 P19338 NCL P19338.S42.p_NCL P19338_S41sS42s_2_2_41_42 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20335.20335.5 29.39 29.39 5.29 4 2 2 0 1028.6677 4979.3843 S41s S42s TMT10 17 (K) MAPPPKEVEEDSEDEEMSEDEEDDssGEEVVIPQKK (G) MAPPPKEVEEDS(0.0)EDEEMS(0.0)EDEEDDS(0.99)S(0.99)GEEVVIPQKK K:TMT10,s:Phosphorylated S NCL 76670.1 7 24 114.1 570.88 HUMAN 2 -5.0955 28.0229 EDEEDDVSEGSEVPE-p Q6SPF0;S345-p EDEEDDVSEGSEVPE 0.164162708749184 0.966075213584248 0.448 0.0133333333333334 15.7178530405396 0.213430597267354 0.448 0.0133333333333333 0.0268049311434277 0.952043824448582 3.01420064829783 0.0629737147944949 Q6SPF0 SAMD1 Q6SPF0.S345.p_SAMD1 Q6SPF0_S345sS348s_2_2_345_348 Q6SPF0 Q6SPF0|E9PIW9 Atherin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12148.12148.5 21.48 21.48 6.317 3 2 2 0 1123.0731 5451.4017 S345s S348s TMT10 325 (R) VLEKEEEEDDDEDEDEEDDVsEGsEVPESDRPAGAQHHQLNGER (G) VLEKEEEEDDDEDEDEEDDVS(0.99)EGS(0.99)EVPES(0.0)DRPAGAQHHQLNGER K:TMT10,s:Phosphorylated S SAMD1 56222 1 5 1432.1 142.81 HUMAN 1 15.7179 0.2134 EDEEMIESIENLEDL-p P49736;S170-p EDEEMIESIENLEDL 0.545642581004852 0.991707895146557 -0.0943333333333334 0.00133333333333337 4.8566446053028 0.0533663998659476 -0.0943333333333334 0.00133333333333337 0.326840254102384 0.987787122328757 -1.07772081527117 0.0160256255271706 P49736 MCM2 P49736.S170.p_MCM2 P49736_S170s _1_1_170_170 P49736 P49736 DNA replication licensing factor MCM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30862.30862.3 20.07 20.07 9.404 2 1 1 0 1026.1355 2996.4182 S170s TMT10 157 (R) ATEDGEEDEEMIEsIENLEDLK (G) AT(0.0)EDGEEDEEMIES(0.99)IENLEDLK K:TMT10,s:Phosphorylated S MCM2 102579 7 7 259.1 397.63 HUMAN 1 -4.8566 0.0534 EDEGEEDSDSDYEIS-p A2RRP1;S473-p EDEGEEDSDSDYEIS 0.665544717655066 0.0442989058157873 -0.0806666666666667 0.302 3.30614322644431 18.122990365929 -0.0806666666666667 0.302 0.467073983545412 0.015406392693855 -0.781936141707441 3.48432191871131 A2RRP1 NBAS A2RRP1.S473.p_NBAS A2RRP1_S473s _1_1_473_473 A2RRP1 A2RRP1|A2RRP1-2 Neuroblastoma-amplified sequence HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13662.13662.2 23.75 23.75 2.591 4 1 1 0 1357.0683 2633.1626 S473s TMT10 463 (R) AGEEDEGEEDsDSDYEISAK (A) AGEEDEGEEDS(0.99)DS(0.0)DY(0.0)EIS(0.0)AK K:TMT10,s:Phosphorylated S NBAS 271875.5 2 1 2447.1 83.13 HUMAN 1 -3.3061 18.123 EDEILNRSPRNRKPR-p P27824-2;S618-p EDEILNRSPRNRKPR 0.89934219379599 0.202991200155497 -0.0196666666666667 -0.209333333333333 0.901051122500597 9.10843450030246 -0.0196666666666667 -0.209333333333333 0.812633810680756 0.122788176547511 -0.248870594983962 -1.82646946687609 P27824 CANX P27824.2.S618.p_CANX P27824-2_S618s _1_1_618_618 P27824-2 P27824-2|P27824-3 Isoform 2 of Calnexin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11628.11628.5 16.71 13.26 4.616 4 1 1 0 877.4295 4303.1529 S618s TMT10 589 (K) SDAEEDGGTVSQEEEDRKPKAEEDEILNRsPR (N) S(0.0)DAEEDGGT(0.0)VS(0.0)QEEEDRKPKAEEDEILNRS(0.99)PR K:TMT10,s:Phosphorylated S CANX 72015 37 4 806.1 222 HUMAN 1 -0.9011 -9.1084 EDELMEFSDLESDSE-p Q9P2D1;S1577-p EDELMEFSDLESDSE 0.995213264133306 0.0873607950416798 -0.000999999999999992 -0.307666666666667 0.0399716826415749 14.0159436907837 -0.000999999999999989 -0.307666666666667 0.990838405447982 0.039664833072734 -0.0120225898977445 -2.69422780897703 Q9P2D1 CHD7 Q9P2D1.S1577.p_CHD7 Q9P2D1_S1577sS1581s_2_2_1577_1581 Q9P2D1 Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24899.24899.4 10.99 10.99 2.971 5 2 2 0 1120.5435 4319.2233 S1577s S1581s TMT10 1564 (R) LYSAVKEDELMEFsDLEsDSEEKPCAKPR (R) LY(0.0)S(0.0)AVKEDELMEFS(0.99)DLES(0.99)DS(0.0)EEKPCAKPR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CHD7 337747 1 17 256.1 399.25 HUMAN 1 -0.04 -14.0159 EDELQPYTNRRQNRK-p Q9UIS9-12;T330-p EDELQPYTNRRQNRK 0.479997452313128 0.102258132282505 0.104 0.220666666666667 5.86866623389302 13.0804244003907 0.104 0.220666666666667 0.25890079058671 0.0491991455041011 1.26113203183051 2.52417394583061 Q9UIS9 MBD1 Q9UIS9.12.T330.p_MBD1 Q9UIS9-12_T330t_1_1_330_330 Q9UIS9-12 Q9UIS9-12|Q9UIS9-9|Q9UIS9-5 Isoform 12 of Methyl-CpG-binding domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28923.28923.3 7.61 7.61 1.122 5 1 1 0 1175.5482 3443.6779 T330t N331n TMT10 307 (R) ALAPSPPAEFIYYCVDEDELQPYtnRR (Q) ALAPS(0.0)PPAEFIY(0.0)Y(0.0)CVDEDELQPY(0.0)T(0.99)N(1.0)RR C:Carbamidomethylation,t:Phosphorylated T,n:Deamidated MBD1 74521.1 1 5 1033.1 185.84 HUMAN 1 5.8687 13.0804 EDELSDVSQGGSKAT-p O60271;S268-p EDELSDVSQGGSKAT 0.219634467679689 0.983409361674526 -0.291666666666667 -0.005 12.6735499410249 0.106586754865262 -0.291666666666667 -0.00500000000000009 0.0540312488732657 0.975756211288195 -2.45240539350949 -0.0318172202561909 O60271 SPAG9 O60271.S268.p_SPAG9 O60271_S265sS268s_2_2_265_268 O60271 O60271|O60271-3 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13975.13975.3 12.31 12.31 6.084 3 2 2 0 799.3616 2236.1345 S265s S268s TMT10 257 (K) AVEQEDELsDVsQGGSK (A) AVEQEDELS(0.99)DVS(0.99)QGGS(0.0)K K:TMT10,s:Phosphorylated S SPAG9 147001.6 1 43 84.1 629.25 HUMAN 1 -12.6735 -0.1066 EDELSRESSPDIEEI-p F8W8Y7;S1891-p EDELSRESSPDIEEI 0.467749698751906 0.795443429069991 0.112333333333333 0.0286666666666667 6.09304281853397 1.38810604212302 0.112333333333333 0.0286666666666667 0.245864438857943 0.726422681239831 1.30112147174903 0.368545881575079 F8W8Y7 ARMCX4 F8W8Y7.S1891.p_ARMCX4 F8W8Y7_S1891sS1892s_2_2_1891_1892 F8W8Y7 F8W8Y7 Armadillo repeat-containing X-linked protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21458.21480.3 11.17 8.21 2.592 4 2 2 0 921.7493 2603.2998 S1891s S1892s TMT10 1881 (R) NVGEDELSREssPDIEEISLR (S) NVGEDELS(0.0)RES(0.99)S(0.99)PDIEEIS(0.0)LR s:Phosphorylated S ARMCX4 237557.4 1 2 5520.1 18.56 HUMAN 1 6.093 1.3881 EDENGDITPIKAKKM-p Q99547;T147-p EDENGDITPIKAKKM 0.983596559616755 0.0035884554059756 -0.00333333333333334 -0.732 0.142519636351119 36.4198910676991 -0.00333333333333334 -0.732 0.967716255641584 0.000228039926960121 -0.042379170732467 -8.63191337076602 Q99547 MPHOSPH6 Q99547.T147.p_MPHOSPH6 Q99547_T147t _1_1_147_147 Q99547 Q99547|H3BNT4|H3BSB3 M-phase phosphoprotein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11258.11258.2 22.51 19.75 7.487 2 1 1 0 1134.997 2189.0196 T147t Hydrogen 134 (R) DHANYEEDENGDItPIK (A) DHANY(0.0)EEDENGDIT(0.99)PIK K:TMT10-Lys-Only,t:Phosphorylated T MPHOSPH6 19080.4 6 2 1854.1 110.97 HUMAN 1 -0.1425 -36.4199 EDENRSVSGFLHFDT-p Q92621;S1167-p EDENRSVSGFLHFDT 0.952606731320845 0.255687521994718 0.0106666666666667 0.15 0.416798985690774 7.8001293669847 0.0106666666666667 0.15 0.908489895740312 0.165953747264956 0.120427296577975 1.59997431230387 Q92621 NUP205 Q92621.S1167.p_NUP205 Q92621_S1167s _1_1_1167_1167 Q92621 Q92621 Nuclear pore complex protein Nup205 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22265.22265.3 14.98 14.98 2.275 4 1 1 0 573.6158 1638.8689 S1167s Hydrogen 1165 (R) SVsGFLHFDTATK (V) S(0.0)VS(0.99)GFLHFDT(0.0)AT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S NUP205 230313.6 4 4 2077.1 98.86 HUMAN 1 0.4168 7.8001 EDEPDAKSPKTGGRA-p P48382;S10-p EDEPDAKSPKTGGRA 0.640506722316212 0.0340993601540337 -0.068 0.280333333333333 3.61494094049439 19.7710766522131 -0.068 0.280333333333333 0.435016676362123 0.0105412553749066 -0.842770333081947 3.82646390961505 P48382 RFX5 P48382.S10.p_RFX5 P48382_S10s _1_1_10_10 P48382 P48382|P48382-2|F2Z2G0|F8WFE4|F8WDU3 DNA-binding protein RFX5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6579.6579.3 13.16 13.16 3.072 2 1 1 0 713.3563 2058.0868 S10s Acetyl 2 (M) AEDEPDAKsPKTGGR (A) AEDEPDAKS(0.99)PKT(0.0)GGR K:TMT10,s:Phosphorylated S RFX5 65721.2 6 1 1365.1 149.8 HUMAN 1 -3.6149 19.7711 EDEPEERSGDETPGS-p Q1KMD3;S161-p EDEPEERSGDETPGS 0.855344659236858 0.0320849526179946 -0.0363333333333334 0.544 1.31944727628831 20.1542965592342 -0.0363333333333334 0.544 0.737998148688259 0.00965095618793499 -0.352194377876492 3.90844922484213 Q1KMD3 HNRNPUL2 Q1KMD3.S161.p_HNRNPUL2 Q1KMD3_S161s _1_1_161_161 Q1KMD3 Q1KMD3|H3BQZ7 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10133.10133.5 24 24 2.555 4 1 1 0 912.4089 4478.033 S161s TMT10 153 (R) EEDEPEERsGDETPGSEVPGDKAAEEQGDDQDSEK (S) EEDEPEERS(0.99)GDET(0.0)PGS(0.0)EVPGDKAAEEQGDDQDS(0.0)EK K:TMT10,s:Phosphorylated S HNRNPUL2 85673.7 27 1 294.1 379.87 HUMAN 1 -1.3194 20.1543 EDEQPLNSAAHKESP-p E7ETA6;S1877-p EDEQPLNSAAHKESP 0.213186700667292 0.0362630532181168 0.218333333333333 0.32 12.9516558287411 19.3920238565368 0.218333333333333 0.32 0.050679744545283 0.0115026422917511 2.50235920091654 3.74629956776464 E7ETA6 PCM1 E7ETA6.S1877.p_PCM1 E7ETA6_S1877s _1_1_1877_1877 E7ETA6 Q15154|E7ETA6|Q15154-2 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21523.21523.5 18.21 18.21 13.833 4 1 1 0 959.6838 4714.4375 S1877s TMT10 1849 (R) EATSKNDQNNCPVKPCYLNILEDEQPLNsAAHK (E) EAT(0.0)S(0.0)KNDQNNCPVKPCY(0.0)LNILEDEQPLNS(0.99)AAHK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PCM1 229381.8 2 53 13.1 1159.95 HUMAN 1 12.9517 19.392 EDEVSIGSAPLAKQQ-p Q7Z7G8;S1002-p EDEVSIGSAPLAKQQ 0.0533793800576645 0.00676457338427371 -0.458333333333333 -0.565333333333333 27.6355466843416 31.15104016073 -0.458333333333333 -0.565333333333333 0.00172363510838664 0.000767177723796396 -5.74376772637437 -6.77882825897143 Q7Z7G8 VPS13B Q7Z7G8.S1002.p_VPS13B Q7Z7G8_S999sS1002s_2_2_999_1002 Q7Z7G8 Q7Z7G8|Q7Z7G8-6|Q7Z7G8-2|Q7Z7G8-3 Vacuolar protein sorting-associated protein 13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15478.15478.5 10.36 7.99 99 2 2 2 0 490.2641 2287.3589 S999s S1002s TMT10 993 (R) RKEDEVsIGsAPLAK (Q) RKEDEVS(1.0)IGS(1.0)APLAK K:TMT10,s:Phosphorylated S VPS13B 454589.9 3 16 766.1 229.13 HUMAN 1 -27.6355 -31.151 EDFRRSPTEDFRQLP-p Q8IXT5;T640-p EDFRRSPTEDFRQLP 0.751062438504325 0.581472443970348 0.06 0.117333333333333 2.36957295626514 3.1787757104331 0.06 0.117333333333333 0.579485674714847 0.480974917655942 0.589175674798723 0.756385683623012 Q8IXT5 RBM12B Q8IXT5.T640.p_RBM12B Q8IXT5_S638sT640t_2_2_638_640 Q8IXT5 Q8IXT5 RNA-binding protein 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18886.18886.5 9.68 6.65 99 2 2 2 0 884.4175 4258.1115 S638s T640t TMT10 629 (R) RPLEEDFRRsPtEDFRQLPEEDFRQPPEEDLR (W) RPLEEDFRRS(1.0)PT(1.0)EDFRQLPEEDFRQPPEEDLR s:Phosphorylated S,t:Phosphorylated T RBM12B 118442.9 1 17 384.1 333.8 HUMAN 1 2.3696 3.1788 EDFSPFGSGGGLFSG-p Q641Q2;S356-p EDFSPFGSGGGLFSG 0.0502987961976786 0.656245013907034 -0.544 -0.066 28.6383047325269 2.50026937943772 -0.544 -0.066 0.00136826282243234 0.562306445978574 -6.02828783816756 -0.616867404346864 Q641Q2 FAM21A Q641Q2.S356.p_FAM21A Q641Q2_S356s _1_1_356_356 Q641Q2 Q9Y4E1-2|E7ESD2|Q9Y4E1-6|Q9Y4E1-3|J3KP36|F8W7U3|A0A087WYF6|Q9Y4E1-5|Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2|Q9Y4E1-4 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33403.33403.3 15.86 15.23 3.283 4 1 1 0 838.4055 2433.2338 S356s TMT10 346 (K) LTDEDFSPFGsGGGLFSGGK (G) LT(0.0)DEDFS(0.0)PFGS(0.99)GGGLFS(0.0)GGK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 3 25 12.1 1178.3 HUMAN 1 -28.6383 -2.5003 EDFVDDVSEEELLGD-p P55884-2;S164-p EDFVDDVSEEELLGD 0.706540552407433 0.247950920628884 -0.0863333333333333 0.119 2.83532361893759 7.97905447819354 -0.0863333333333333 0.119 0.520556217581808 0.159255541162294 -0.686761485564385 1.63101135767078 P55884 EIF3B P55884.2.S164.p_EIF3B P55884-2_S164s _1_1_164_164 P55884-2 P55884-2 Isoform 2 of Eukaryotic translation initiation factor 3 subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37121.37657.4 22.9 20.3 1.876 3 1 1 0 1034.2209 4053.9229 S164s TMT10 142 (R) ALENGDADEPSFSDPEDFVDDVsEEELLGDVLK (D) ALENGDADEPS(0.0)FS(0.0)DPEDFVDDVS(0.99)EEELLGDVLK K:TMT10,s:Phosphorylated S EIF3B 99769.3 1 5 1156.1 171.77 HUMAN 1 -2.8353 7.9791 EDGACEGSPLEEKAS-p Q5T481;S1080-p EDGACEGSPLEEKAS 0.218737880010197 0.465649977528607 -0.186 0.149666666666667 12.7207986976407 4.42666777076886 -0.186 0.149666666666667 0.0534466058347153 0.360855411853418 -2.46087595390814 0.997675798359386 Q5T481 RBM20 Q5T481.S1080.p_RBM20 Q5T481_S1080s _1_1_1080_1080 Q5T481 Q5T481 RNA-binding protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9450.9450.3 9.51 9.22 2.31 2 1 1 0 662.2859 1904.8745 S1080s Hydrogen 1070 (R) GTPEDGACEGsPLEEK (A) GT(0.0)PEDGACEGS(0.99)PLEEK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S RBM20 135496 1 11 522.1 283.33 HUMAN 1 -12.7208 4.4267 EDGAGGHSPAPPQTE-p O94762;S815-p EDGAGGHSPAPPQTE 0.185220024211789 0.0235267767511006 -0.263333333333333 0.308333333333333 14.4007941108134 22.2093416861176 -0.263333333333333 0.308333333333333 0.0363011671736731 0.0060126487173211 -2.76680671886266 4.36529237449911 O94762 RECQL5 O94762.S815.p_RECQL5 O94762_S815s _1_1_815_815 O94762 O94762|O94762-4 ATP-dependent DNA helicase Q5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10047.10047.4 27.41 27.41 9.505 4 1 1 0 692.5527 2687.2205 S815s TMT10 804 (K) YTGEEDGAGGHsPAPPQTEECLR (E) Y(0.0)T(0.0)GEEDGAGGHS(0.99)PAPPQT(0.0)EECLR C:Carbamidomethylation,s:Phosphorylated S RECQL5 110568 4 4 823.1 218.4 HUMAN 1 -14.4008 22.2093 EDGDWEWSDDEMDEK-p Q9UEW8;S385-p EDGDWEWSDDEMDEK 0.10854647135141 0.0222692068071635 -0.506 0.440333333333333 20.2274030112142 22.5695504839172 -0.506 0.440333333333333 0.00948985767004566 0.00553407386629387 -3.92792435166513 4.44853843959338 Q9UEW8 STK39 Q9UEW8.S385.p_STK39 Q9UEW8_S385s _1_1_385_385 Q9UEW8 Q9UEW8|Q9UEW8-2 STE20/SPS1-related proline-alanine-rich protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19713.19713.3 20.94 20.94 7.489 3 1 1 0 1095.4741 3204.4406 S385s TMT10 377 (K) TEDGDWEWsDDEMDEKSEEGK (A) T(0.0)EDGDWEWS(0.99)DDEMDEKS(0.0)EEGK K:TMT10,s:Phosphorylated S STK39 59986.4 8 2 2802.1 70.1 HUMAN 1 -20.2274 22.5696 EDGEAVVSPSDKTKN-p Q6IN85;S698-p EDGEAVVSPSDKTKN 0.55108840983667 0.271846944958485 0.0806666666666667 0.122333333333333 4.77572112603085 7.45041431349617 0.0806666666666667 0.122333333333333 0.332987466679356 0.179869931245368 1.06279284537991 1.53919498574839 Q6IN85 PPP4R3A Q6IN85.S698.p_PPP4R3A Q6IN85_S698s _1_1_698_698 Q6IN85 Q6IN85|Q6IN85-2|G3V5Z3|Q6IN85-4 Serine/threonine-protein phosphatase 4 regulatory subunit 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30273.30273.3 23.89 23.89 1.46 4 1 1 0 1300.8843 3820.6617 S698s TMT10 674 (R) TLEDEEEMWFNTDEDDMEDGEAVVsPSDK (T) T(0.0)LEDEEEMWFNT(0.0)DEDDMEDGEAVVS(0.99)PS(0.0)DK K:TMT10,s:Phosphorylated S PPP4R3A 95994.2 19 4 842.1 214.14 HUMAN 1 4.7757 7.4504 EDGGDAPSPSKRPWA-p Q96KS0;S130-p EDGGDAPSPSKRPWA 0.574658438736738 0.029722840271093 -0.135 -0.317 4.42642065599796 20.6647369529988 -0.135 -0.317 0.36087594521112 0.0085807708585697 -0.997812006238551 -4.01916326386208 Q96KS0 EGLN2 Q96KS0.S130.p_EGLN2 Q96KS0_S130s _1_1_130_130 Q96KS0 Q96KS0|Q96KS0-2 Egl nine homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13461.13461.2 12.4 12.4 2 2 1 1 0 927.9391 1774.9012 S130s TMT10 121 (K) WAEDGGDAPsPSK (R) WAEDGGDAPS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S EGLN2 44391.4 3 2 3322.1 53.98 HUMAN 1 -4.4264 -20.6647 EDGGDRWSKPYVATL-p Q9Y6M7-13;S159-p EDGGDRWSKPYVATL 0.0395731079578075 0.10048620458838 -1.37766666666667 -0.191 31.5584226323256 13.1846044244423 -1.37766666666667 -0.191 0.000698486049772314 0.0480329828915947 -6.92065144116265 -2.54296649412976 Q9Y6M7 SLC4A7 Q9Y6M7.13.S159.p_SLC4A7 Q9Y6M7-13_S159s _1_1_159_159 Q9Y6M7-13 Q9Y6M7-7|Q9Y6M7-8|E9PFN4|Q9Y6M7-12|A0A0A0MST8|Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-9|Q9Y6M7-2|Q9Y6M7-3|Q9Y6M7-4|Q9Y6M7-10|Q9Y6M7-14|Q9Y6M7-11 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24856.24856.4 13.15 13.15 99 1 1 1 0 716.6136 2783.4608 S159s TMT10 144 (R) WLKFEEDVEDGGDRWsK (P) WLKFEEDVEDGGDRWS(1.0)K K:TMT10,s:Phosphorylated S SLC4A7 128884.6 1 4 207.1 445.25 HUMAN 1 -31.5584 -13.1846 EDGGWEWSDDEFDEE-p O95747;S339-p EDGGWEWSDDEFDEE 0.446938240083527 0.732977101491077 0.17 0.0633333333333334 6.45073430905092 1.86044041746019 0.17 0.0633333333333334 0.226426143184793 0.651562315862059 1.36448136880878 0.477614791395342 O95747 OXSR1 O95747.S339.p_OXSR1 O95747_S339s _1_1_339_339 O95747 O95747|C9JIG9 Serine/threonine-protein kinase OSR1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20784.20784.3 25 25 8.114 3 1 1 0 1207.8777 3541.6486 S339s TMT10 328 (R) LHKTEDGGWEWsDDEFDEESEEGK (A) LHKT(0.0)EDGGWEWS(0.99)DDEFDEES(0.0)EEGK K:TMT10,s:Phosphorylated S OXSR1 58306.4 13 4 1176.1 169.76 HUMAN 1 6.4507 1.8604 EDGIEPVSPPEGMTE-p Q9Y618;S2234-p EDGIEPVSPPEGMTE 0.893219546514556 0.0563735338891251 0.022 0.219666666666667 0.959661221447669 16.6417651286799 0.022 0.219666666666667 0.801740602042511 0.0216682325107145 0.263729035107044 3.19003956258477 Q9Y618 NCOR2 Q9Y618.S2234.p_NCOR2 Q9Y618_S2234s _1_1_2234_2234 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7|Q9Y618-2 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19130.19343.3 25.39 25.39 10.182 5 1 1 0 1001.1343 2921.4148 S2234s TMT10 2220 (K) TSVLGGGEDGIEPVsPPEGMTEPGHSR (S) T(0.0)S(0.0)VLGGGEDGIEPVS(0.99)PPEGMT(0.0)EPGHS(0.0)R s:Phosphorylated S NCOR2 275540.8 6 35 16.1 1053.89 HUMAN 1 0.9597 16.6418 EDGKSILSALDKGST-p Q05084-2;S356-p EDGKSILSALDKGST 0.350515030702297 0.0255839643834166 -0.176666666666667 0.339666666666667 8.45792123316487 21.6615966953609 -0.176666666666667 0.339666666666667 0.142629012936278 0.00682087876592523 -1.71452003317646 4.24057553773144 Q05084 ICA1 Q05084.2.S356.p_ICA1 Q05084-2_S356s _1_1_356_356 Q05084-2 Q05084-2|Q05084-3|E9PDL4 Isoform 2 of Islet cell autoantigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28440.28440.2 10.52 2.75 4.507 2 1 1 0 692.8962 1304.819 S356s TMT10 353 (K) SILsALDK (G) S(0.0)ILS(0.99)ALDK K:TMT10,s:Phosphorylated S ICA1 58548.4 1 2 5487.1 18.87 HUMAN 1 -8.4579 21.6616 EDGSSDQSQASGTTG-p Q9UNF1;S194-p EDGSSDQSQASGTTG 0.429365892463725 0.241617976435068 0.139666666666667 0.166666666666667 6.75969965778101 8.12546172130124 0.139666666666667 0.166666666666667 0.210877398000555 0.153976281707528 1.41888081167898 1.65638439265413 Q9UNF1 MAGED2 Q9UNF1.S194.p_MAGED2 Q9UNF1_S194s _1_1_194_194 Q9UNF1 Q9UNF1|Q9UNF1-2 Melanoma-associated antigen D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4711.4711.3 23.39 23.39 2.32 6 1 1 0 834.0206 2420.0759 S194s TMT10 182 (K) HLDGEEDGSSDQsQASGTTGGR (R) HLDGEEDGS(0.0)S(0.0)DQS(0.99)QAS(0.0)GT(0.0)T(0.0)GGR s:Phosphorylated S MAGED2 65124.3 1 10 893.1 204.33 HUMAN 1 6.7597 8.1255 EDGVVERSSPKSEIE-p O75044;S795-p EDGVVERSSPKSEIE 0.392963338941676 0.143247604902918 0.135666666666667 0.197666666666667 7.48095946404471 11.1174183785728 0.135666666666667 0.197666666666667 0.178609293910616 0.077314003411958 1.54496732648048 2.17569991767784 O75044 SRGAP2 O75044.S795.p_SRGAP2 O75044_S795s _1_1_795_795 O75044 O75044|B7ZM87 SLIT-ROBO Rho GTPase-activating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20085.20085.3 15.57 10.12 1.12 4 1 1 0 884.8048 2572.4325 S795s TMT10 795 (R) sSPKSEIEVISEPPEEK (V) S(0.99)S(0.0)PKS(0.0)EIEVIS(0.0)EPPEEK K:TMT10,s:Phosphorylated S SRGAP2 122066.6 4 5 489.1 294.64 HUMAN 1 7.481 11.1174 EDHSAPPSPEEKDSG-p Q99683;S1033-p EDHSAPPSPEEKDSG 0.170911150358501 0.0105402839067407 -0.270666666666667 -0.398 15.307102432982 27.7332602796128 -0.270666666666667 -0.398 0.0294638677637327 0.00168528739313736 -2.93624940330279 -5.76279268749473 Q99683 MAP3K5 Q99683.S1033.p_MAP3K5 Q99683_S1033s _1_1_1033_1033 Q99683 Q99683|Q99683-2 Mitogen-activated protein kinase kinase kinase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27297.27297.4 18.94 18.94 3.032 3 1 1 0 777.6296 3027.5352 S1033s TMT10 1015 (R) TLFLGIPDENFEDHSAPPsPEEK (D) T(0.0)LFLGIPDENFEDHS(0.0)APPS(0.99)PEEK K:TMT10,s:Phosphorylated S MAP3K5 155846.3 2 2 3812.1 42.57 HUMAN 1 -15.3071 -27.7333 EDHVFCHSL______-p Q13137-4;S469-p EDHVFCHSL______ 0.334770198107144 0.0540445895836043 -0.156 -0.245666666666667 8.87106468578182 16.8951515590459 -0.156 -0.245666666666667 0.129686130262177 0.0204401860308709 -1.78604374182839 -3.23956292107518 Q13137 CALCOCO2 Q13137.4.S469.p_CALCOCO2 Q13137-4_S469s _1_1_469_469 Q13137-4 Q13137-4|Q13137-3|Q13137-2|Q13137-5 Isoform 4 of Calcium-binding and coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21429.21429.3 16.84 16.84 99 1 1 1 0 614.2805 1760.8628 S469s TMT10 459 (K) QIFEDHVFCHsL (-) QIFEDHVFCHS(1.0)L C:Carbamidomethylation,s:Phosphorylated S CALCOCO2 55986 3 8 1533.1 133.47 HUMAN 1 -8.8711 -16.8952 EDHYNNLSASKVL__-p P08727;S395-p EDHYNNLSASKVL__ 0.0711508486254939 0.332052623829058 -0.561 0.188666666666667 24.7939180831551 6.34402655196292 -0.561 0.188666666666667 0.00331595166696709 0.232058427393168 -4.99177120666912 1.34528830698056 P08727 KRT19 P08727.S395.p_KRT19 P08727_S395s _1_1_395_395 P08727 P08727 Keratin, type I cytoskeletal 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15261.15261.4 19.46 19.46 2.538 4 1 1 0 611.5533 2363.2243 S395s TMT10 382 (R) SLLEGQEDHYNNLsASK (V) S(0.0)LLEGQEDHY(0.0)NNLS(0.99)AS(0.0)K K:TMT10,s:Phosphorylated S KRT19 44105.2 6 22 383.1 334.07 HUMAN 1 -24.7939 6.344 EDIEGKQSEEEVKGS-p Q3L8U1;S654-p EDIEGKQSEEEVKGS 0.234993332329258 0.00834332988709938 0.298333333333333 -0.702333333333333 12.0525418638759 29.5505796784426 0.298333333333333 -0.702333333333333 0.0623369879160711 0.00110902677704225 2.34165750476302 -6.286774384079 Q3L8U1 CHD9 Q3L8U1.S654.p_CHD9 Q3L8U1_S654s _1_1_654_654 Q3L8U1 Q3L8U1|Q3L8U1-3|Q3L8U1-2 Chromodomain-helicase-DNA-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14393.14393.4 11.66 11.66 11.661 3 1 1 0 789.1611 3073.6533 S654s TMT10 645 (K) YAEDIEGKQsEEEVKGSMK (I) Y(0.0)AEDIEGKQS(0.99)EEEVKGS(0.0)MK K:TMT10,s:Phosphorylated S CHD9 328184.1 1 4 1062.1 182 HUMAN 1 12.0525 -29.5506 EDINKRLSLPADIRL-p Q00536-2;S193-p EDINKRLSLPADIRL 0.176872821059086 0.0548752135161895 -0.269666666666667 -0.268666666666667 14.9165470210197 16.8031404303906 -0.269666666666667 -0.268666666666667 0.032236308099151 0.0208778588431861 -2.8628141015996 -3.22154220326119 Q00536 CDK16 Q00536.2.S193.p_CDK16 Q00536-2_S193s _1_1_193_193 Q00536-2 Q00536-2|Q00536-3|A0A087WZU2 Isoform 2 of Cyclin-dependent kinase 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26626.26626.5 15.79 15.79 2.449 4 1 1 0 728.4113 3558.051 S193s TMT10 183 (K) ISTEDINKRLsLPADIRLPEGYLEK (L) IS(0.0)T(0.0)EDINKRLS(0.99)LPADIRLPEGY(0.0)LEK K:TMT10,s:Phosphorylated S CDK16 63855.9 8 5 672.1 248.68 HUMAN 1 -14.9165 -16.8031 EDIPLNLSRELLQES-p Q12931;S401-p EDIPLNLSRELLQES 0.827502785079104 0.0187250405617923 -0.0323333333333333 0.555666666666667 1.5822843470137 23.7680474668749 -0.0323333333333333 0.555666666666667 0.694658837640889 0.00419947744756332 -0.41417146808576 4.73284518259589 Q12931 TRAP1 Q12931.S401.p_TRAP1 Q12931_S401s _1_1_401_401 Q12931 Q12931|Q12931-2|I3L0K7 Heat shock protein 75 kDa, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29741.29741.4 10.5 5.87 2.481 3 1 1 0 833.9606 3252.8568 S401s TMT10 389 (R) GVVDSEDIPLNLsRELLQESALIRK (L) GVVDS(0.0)EDIPLNLS(0.99)RELLQES(0.0)ALIRK K:TMT10,s:Phosphorylated S TRAP1 80393.8 1 48 43.4 810.87 HUMAN 1 -1.5823 23.768 EDIRKLDYGQHVVAG-p P38919;Y155-p EDIRKLDYGQHVVAG 0.707346369684743 0.209662859615096 0.129 0.289333333333333 2.82678452554137 8.92488136943898 0.129 0.289333333333333 0.521580741531506 0.128089008246269 0.685005204584989 1.79471967718099 P38919 EIF4A3 P38919.Y155.p_EIF4A3 P38919_Y155y _1_1_155_155 P38919 P38919 Eukaryotic initiation factor 4A-III GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11134.11134.3 12.85 12.85 8.235 2 1 1 0 712.7181 2056.1704 Y155y TMT10 152 (R) KLDyGQHVVAGTPGR (V) KLDY(0.99)GQHVVAGT(0.0)PGR K:TMT10,y:Phosphorylated Y EIF4A3 47155.5 1 1 74.2 34.02 HUMAN 1 2.8268 8.9249 EDISPNLSPDDKSFS-p A6NNK5;S1385-p EDISPNLSPDDKSFS 0.578040886243326 0.0764839388560517 0.0966666666666667 0.249666666666667 4.37911359544142 14.8142857730775 0.0966666666666667 0.249666666666667 0.364828401603746 0.0330043681384327 0.988938618003479 2.84186600663394 A6NNK5 TP53BP1 A6NNK5.S1385.p_TP53BP1 A6NNK5_S1381sS1385s_2_2_1381_1385 A6NNK5 A6NNK5 TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28123.28123.4 14.02 14.02 14.019 3 2 2 0 788.6486 2991.6403 S1381s S1385s TMT10 1366 (K) LRETAVPGPLGIEDIsPNLsPDDK (S) LRET(0.0)AVPGPLGIEDIS(0.99)PNLS(0.99)PDDK K:TMT10,s:Phosphorylated S TP53BP1 211012.5 1 1 3.3 2297.07 HUMAN 1 4.3791 14.8143 EDKEKKRSKTPPKSY-p Q05519-2;S323-p EDKEKKRSKTPPKSY 0.0866557243462627 0.00735907798960688 1.091 -0.733 22.7230570395973 30.5075221879124 1.091 -0.733 0.00534188206934038 0.000889708585029275 4.48926174677501 -6.57737838017473 Q05519 SRSF11 Q05519.2.S323.p_SRSF11 Q05519-2_S323sT325t_2_2_323_325 Q05519-2 Q05519|Q05519-2|Q5T757 Isoform 2 of Serine/arginine-rich splicing factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6092.6092.4 11.53 9.99 11.532 6 2 2 0 485.9973 1781.0322 S323s T325t Hydrogen 323 (R) sKtPPKSYSTAR (R) S(0.99)KT(0.99)PPKS(0.0)Y(0.0)S(0.0)T(0.0)AR K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T SRSF11 53527.2 5 15 185.1 475.04 HUMAN 1 22.7231 -30.5075 EDKKEQESDEEEEEE-p Q8NFC6;S2986-p EDKKEQESDEEEEEE 0.0970401313584222 0.0562611954478064 0.398 0.256 21.4881966884446 16.6541915567364 0.398 0.256 0.0070987246557967 0.0216063220105854 4.20586392349076 3.19246072848739 Q8NFC6 BOD1L1 Q8NFC6.S2986.p_BOD1L1 Q8NFC6_S2986s _1_1_2986_2986 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12397.12397.4 21.36 19.74 5.492 6 1 1 0 1102.2462 4325.9995 S2986s TMT10 2973 (K) SVSDPVEDKKEQEsDEEEEEEEEDEPSGATTR (S) S(0.0)VS(0.0)DPVEDKKEQES(0.99)DEEEEEEEEDEPS(0.0)GAT(0.0)T(0.0)R K:TMT10,s:Phosphorylated S BOD1L1 332628.7 2 25 97.1 603.4 HUMAN 1 21.4882 16.6542 EDKLHKRSPPPETIK-p Q15652;S617-p EDKLHKRSPPPETIK 0.625942380562294 0.628350739324029 -0.08 0.052 3.77942506145036 2.74396188365037 -0.08 0.052 0.418849010561845 0.531623060903804 -0.8747245043222 0.667821116504901 Q15652 JMJD1C Q15652.S617.p_JMJD1C Q15652_S617s _1_1_617_617 Q15652 Q15652|Q15652-3|A0A1W2PNZ9|Q15652-2 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7641.7641.4 15.53 14.85 15.527 2 1 1 0 543.3242 2090.3053 S617s TMT10 613 (K) LHKRsPPPETIK (S) LHKRS(0.99)PPPET(0.0)IK K:TMT10,s:Phosphorylated S JMJD1C 286573.8 11 7 377.1 336.35 HUMAN 1 -3.7794 2.744 EDKMSPASPIDDIER-p Q96CJ1;S154-p EDKMSPASPIDDIER 0.130972992482068 0.317983630722808 -0.601333333333333 -0.109 18.2590780733293 6.57752178992568 -0.601333333333333 -0.109 0.0149311133579464 0.219911439317143 -3.51488872528578 -1.38647832689337 Q96CJ1 EAF2 Q96CJ1.S154.p_EAF2 Q96CJ1_S154s _1_1_154_154 Q96CJ1 B4DWJ3|Q96CJ1|Q96CJ1-2 ELL-associated factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28307.28307.3 17.39 17.39 1.285 2 1 1 0 747.0525 2159.1782 S154s TMT10 150 (K) MSPAsPIDDIERELK (A) MS(0.0)PAS(0.99)PIDDIERELK K:TMT10,s:Phosphorylated S EAF2 29133.4 2 2 2357.2 86.81 HUMAN 1 -18.2591 -6.5775 EDKPEGQSPVKAEWP-p Q9C0C9;S896-p EDKPEGQSPVKAEWP 0.120014369208718 0.228144376833983 -0.663 0.349333333333333 19.148131987296 8.4550916131302 -0.663 0.349333333333333 0.0121670922616621 0.142721972307147 -3.6984683171534 1.71345399877176 Q9C0C9 UBE2O Q9C0C9.S896.p_UBE2O Q9C0C9_S896s _1_1_896_896 Q9C0C9 Q9C0C9 (E3-independent) E2 ubiquitin-conjugating enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7307.7307.4 15.56 11.77 99 1 1 1 0 585.3354 2258.3526 S896s TMT10 888 (R) KEDKPEGQsPVK (A) KEDKPEGQS(1.0)PVK K:TMT10,s:Phosphorylated S UBE2O 142717.3 11 12 308.1 373.27 HUMAN 1 -19.1481 8.4551 EDKPIRLSPSKITEP-p O15417;S1136-p EDKPIRLSPSKITEP 0.367391629618305 0.997566213620728 -0.361666666666667 -0.000333333333333315 8.07145650257377 0.0147416397021539 -0.361666666666667 -0.000333333333333314 0.15590295601063 0.996611366439686 -1.64755418423632 -0.00444632566522769 O15417 TNRC18 O15417.S1136.p_TNRC18 O15417_S1136s _1_1_1136_1136 O15417 O15417|H9KVB4|O15417-2|O15417-3 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20502.20502.3 11.35 11.35 1.396 3 1 1 0 840.1589 2438.495 S1136s TMT10 1124 (R) LALSPEDKPIRLsPSK (I) LALS(0.0)PEDKPIRLS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S TNRC18 316168 2 9 75.1 647.68 HUMAN 1 -8.0715 -0.0147 EDKYRRASEELDGLF-p Q14814;S121-p EDKYRRASEELDGLF 0.347863958884634 0.595220213714289 0.154333333333333 0.075 8.52071806430668 3.05033293563848 0.154333333333333 0.075 0.1405815066864 0.495412210422839 1.72539400735043 0.730513551213358 Q14814 MEF2D Q14814.S121.p_MEF2D Q14814_S121s _1_1_121_121 Q14814 Q14814|Q14814-4|Q05BX2 Myocyte-specific enhancer factor 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12887.12887.3 11.73 7.32 99 1 1 1 0 510.2471 1448.7605 S121s Hydrogen 119 (R) RAsEELDGLFRR (Y) RAS(1.0)EELDGLFRR s:Phosphorylated S MEF2D 56165 2 2 1187.1 168.72 HUMAN 1 8.5207 3.0503 EDLDEVSSTSSVSQS-p P35658-3;S987-p EDLDEVSSTSSVSQS 0.233628206047255 0.148564585809927 0.241666666666667 0.235333333333333 12.1043476043643 10.9009285048685 0.241666666666667 0.235333333333333 0.061597805417121 0.0812656754707096 2.35085669746549 2.1378079169721 P35658 NUP214 P35658.3.S987.p_NUP214 P35658-3_S986sS987s_2_2_986_987 P35658-3 P35658-5|P35658-3|P35658-4|P35658-2|A0A0A0MSW3 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22699.22906.3 23.22 23.22 1.239 10 2 2 0 1029.0929 2925.3323 S986s S987s TMT10 978 (R) YYEDLDEVssTSSVSQSLESEDAR (T) Y(0.0)Y(0.0)EDLDEVS(0.99)S(0.99)T(0.0)S(0.0)S(0.0)VS(0.0)QS(0.0)LES(0.0)EDAR s:Phosphorylated S NUP214 214428.5 3 36 111.1 572.27 HUMAN 1 12.1043 10.9009 EDLKALSSEEEEEMG-p A1L390;S577-p EDLKALSSEEEEEMG 0.906237367139803 0.0930084526114289 -0.0203333333333333 0.187 0.840170109847426 13.6431565485606 -0.0203333333333333 0.187 0.824105834781677 0.0432199584609936 -0.233291848173169 2.62610488910181 A1L390 PLEKHG3 A1L390.S577.p_PLEKHG3 A1L390_S576sS577s_2_2_576_577 A1L390 A1L390|A1L390-3|A1L390-2|G3V311 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.36866.36866.4 19.82 15.52 3.918 5 2 2 0 1015.2189 3897.9113 S576s S577s TMT10 574 (K) ALssEEEEEMGGAAQEPESLLPPSVLDQASVIAER (F) ALS(0.99)S(0.99)EEEEEMGGAAQEPES(0.0)LLPPS(0.0)VLDQAS(0.0)VIAER s:Phosphorylated S PLEKHG3 135322.7 4 29 284.1 386.18 HUMAN 1 -0.8402 13.6432 EDLLALKSPSKENIA-p Q6NVY1;S234-p EDLLALKSPSKENIA 0.363515636097975 0.00351192449639082 -0.233 0.609 8.15902448072101 36.6935290238026 -0.233 0.609 0.152790922113251 0.000214115002172898 -1.66273637375989 8.73907224602272 Q6NVY1 HIBCH Q6NVY1.S234.p_HIBCH Q6NVY1_S234s_1_1_234_234 Q6NVY1 Q6NVY1|Q6NVY1-2 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.34086.34367.4 19.53 19.53 2.857 2 1 1 0 636.1121 2445.4605 M224m S234s TMT10 222 (K) LAmLEEDLLALKsPSK (E) LAM(1.0)LEEDLLALKS(0.99)PS(0.0)K K:TMT10,m:Oxidized methionine,s:Phosphorylated S HIBCH 43823.8 3 1 4572.1 29.59 HUMAN 1 -8.159 36.6935 EDLNKRLSLPADIRI-p Q00537-2;S146-p EDLNKRLSLPADIRI 0.459862183124961 0.76142739997274 -0.098 -0.04 6.22017237296387 1.6364929587541 -0.098 -0.04 0.23877165117482 0.686041999642508 -1.32369221572368 -0.426659816614365 Q00537 CDK17 Q00537.2.S146.p_CDK17 Q00537-2_S146s _1_1_146_146 Q00537-2 Q00537|Q00537-2|F5H6Z0 Isoform 2 of Cyclin-dependent kinase 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26125.26125.4 16.01 16.01 9.994 2 1 1 0 624.3514 2414.4172 S146s TMT10 144 (K) RLsLPADIRIPDGYLEK (L) RLS(0.99)LPADIRIPDGY(0.0)LEK K:TMT10,s:Phosphorylated S CDK17 59872.4 4 15 672.2 248.68 HUMAN 1 -6.2202 -1.6365 EDLPHPKSMLQATAE-p Q6DD88;S342-p EDLPHPKSMLQATAE 0.506609842161293 0.423965640498106 -0.107 -0.152333333333333 5.44883689208019 4.96182589792756 -0.107 -0.152333333333333 0.285178191662864 0.319019632354499 -1.18571102699252 -1.09683757222346 Q6DD88 ATL3 Q6DD88.S342.p_ATL3 Q6DD88_S342s _1_1_342_342 Q6DD88 Q6DD88|F5H6I7 Atlastin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25127.25127.3 16.01 16.01 5.294 3 1 1 0 791.0753 2291.243 S342s TMT10 342 (K) sMLQATAEANNLAAAASAK (D) S(0.99)MLQAT(0.0)AEANNLAAAAS(0.0)AK K:TMT10,s:Phosphorylated S ATL3 60997.3 1 6 1880.1 109.36 HUMAN 1 -5.4488 -4.9618 EDLPLNISREMLQQS-p P07900;S399-p EDLPLNISREMLQQS 0.356108068197239 0.0822742118737495 0.131333333333333 -0.190666666666667 8.33445217263868 14.3726684674464 0.131333333333333 -0.190666666666667 0.146742117854614 0.0365370225521154 1.6931351261423 -2.75989229067049 P07900 HSP90AA1 P07900.S399.p_HSP90AA1 P07900_S399s _1_1_399_399 P07900 P07900-2|P08238 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25121.25121.4 11.44 11.44 2.735 3 1 1 0 724.8789 2816.5228 S399s TMT10 387 (R) GVVDSEDLPLNIsREMLQQSK (I) GVVDS(0.0)EDLPLNIS(0.99)REMLQQS(0.0)K K:TMT10,s:Phosphorylated S HSP90AA1 85057.6 3 11 43.1 810.87 HUMAN 1 8.3345 -14.3727 EDLRNCESDTEEDIA-p Q9UIK4;S349-p EDLRNCESDTEEDIA 0.514986061041807 0.378961479090109 0.134666666666667 -0.101 5.32147091072131 5.59897447387857 0.134666666666667 -0.101 0.293665486872375 0.275487915300097 1.16265660139441 -1.21250867137575 Q9UIK4 DAPK2 Q9UIK4.S349.p_DAPK2 Q9UIK4_S349s _1_1_349_349 Q9UIK4 Q9UIK4 Death-associated protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11076.11076.5 16.29 16.29 1.239 2 1 1 0 667.9277 3255.6428 S349s TMT10 335 (K) KVHLRPDEDLRNCEsDTEEDIAR (R) KVHLRPDEDLRNCES(0.99)DT(0.0)EEDIAR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DAPK2 43068.5 5 2 3135.1 59.79 HUMAN 1 5.3215 -5.599 EDLVDSLSEGDAYPN-p P42892;S36-p EDLVDSLSEGDAYPN 0.229977783899196 0.494949303759335 0.178666666666667 0.064 12.2655133850986 4.08428279717607 0.178666666666667 0.064 0.0593538181131615 0.3904556578327 2.379519712754 0.933045935257724 P42892 ECE1 P42892.S36.p_ECE1 P42892_S36s _1_1_36_36 P42892 P42892|P42892-4|P42892-3|B4DKB2 Endothelin-converting enzyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23030.23367.4 30.33 30.33 1.269 5 1 1 0 939.1954 3673.7932 S36s TMT10 23 (K) RATLDEEDLVDSLsEGDAYPNGLQVNFHSPR (S) RAT(0.0)LDEEDLVDS(0.0)LS(0.99)EGDAY(0.0)PNGLQVNFHS(0.0)PR s:Phosphorylated S ECE1 87960.8 7 2 3105.1 60.53 HUMAN 1 12.2655 4.0843 EDMDDVESSEEEEEE-p Q8NAV1;S193-p EDMDDVESSEEEEEE 0.502812376540683 0.0489572362676222 0.0945 0.251833333333333 5.50758551304589 17.5239907918828 0.0945 0.251833333333333 0.281346455864787 0.0176848312789946 1.19631633715442 3.36390005405823 Q8NAV1 PRPF38A Q8NAV1.S193.p_PRPF38A Q8NAV1_S193sS194s_2_2_193_194 Q8NAV1 Q8NAV1 Pre-mRNA-splicing factor 38A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23272.23748.3 19.49 19.49 15.097 3 2 2 0 1097.4419 3130.3669 S193s S194s TMT10 181 (R) VSALEEDMDDVEssEEEEEEDEK (L) VS(0.0)ALEEDMDDVES(0.99)S(0.99)EEEEEEDEK K:TMT10,s:Phosphorylated S PRPF38A 37704.1 9 5 1570.1 130.77 HUMAN 2 5.5076 17.524 EDMLYPPSVLSKSRT-p Q96GE4;S226-p EDMLYPPSVLSKSRT 0.538254677344084 0.609784297999937 0.105333333333333 0.061 4.97286240480016 2.91886501027945 0.105333333333333 0.061 0.318209953069219 0.510638433318644 1.0990826304683 0.703786877620496 Q96GE4 CEP95 Q96GE4.S226.p_CEP95 Q96GE4_S226sS229s_2_2_226_229 Q96GE4 Q96GE4|A0A0A0MTQ1|Q96GE4-2 Centrosomal protein of 95 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22596.22596.3 13.29 13.71 2.234 4 2 2 0 741.0187 2061.1091 S226s S229s TMT10 217 (K) SHEDMLYPPsVLsK (S) S(0.0)HEDMLY(0.0)PPS(0.99)VLS(0.99)K K:TMT10,s:Phosphorylated S CEP95 95922.6 1 8 2407.1 84.85 HUMAN 1 4.9729 2.9189 EDMQSLASLMSMKQA-p Q8NDI1;S174-p EDMQSLASLMSMKQA 0.489684088322886 0.673614682268759 0.112333333333333 0.047 5.71585033812531 2.34638633254715 0.112333333333333 0.047 0.268172948003391 0.582587774432733 1.23377468142679 0.584142816359808 Q8NDI1 EHBP1 Q8NDI1.S174.p_EHBP1 Q8NDI1_S171sS174s_2_2_171_174 Q8NDI1 Q8NDI1|Q8NDI1-2|Q8NDI1-3 EH domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28164.28164.3 12.77 12.77 3.712 4 2 2 0 973.7906 2759.4233 S171s S174s TMT10 161 (R) EGKATDEDMQsLAsLMSMK (Q) EGKAT(0.0)DEDMQS(0.99)LAS(0.99)LMS(0.0)MK K:TMT10,s:Phosphorylated S EHBP1 140642.4 13 16 285.1 385.52 HUMAN 1 5.7159 2.3464 EDNEMSCSP______-p Q9UET6;S328-p EDNEMSCSP______ 0.671851192098137 0.036903380234195 -0.07 -0.274666666666667 3.23604714903123 19.2689690636416 -0.07 -0.274666666666667 0.474673826174861 0.0118332242167578 -0.767961581259368 -3.72046981299196 Q9UET6 FTSJ1 Q9UET6.S328.p_FTSJ1 Q9UET6_S328s _1_1_328_328 Q9UET6 Q9UET6|Q9UET6-2|B7Z4K4 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29490.29490.4 26.13 26.13 2.142 4 1 1 0 924.409 3614.6473 S328s TMT10 300 (R) VDTFPQPLAAPQCHTLLAPEMEDNEMSCsP (-) VDT(0.0)FPQPLAAPQCHT(0.0)LLAPEMEDNEMS(0.0)CS(0.99)P C:Carbamidomethylation,s:Phosphorylated S FTSJ1 36706.1 5 2 3702.1 44.92 HUMAN 1 -3.236 -19.269 EDNLEYDSDGNPIAP-p Q86XP3;S185-p EDNLEYDSDGNPIAP 0.668640000223783 0.085315118406001 0.0603333333333333 0.188666666666667 3.268893015772 14.1488078390403 0.0603333333333333 0.188666666666667 0.47109739030414 0.0384697368982904 0.774517820623901 2.71862907292937 Q86XP3 DDX42 Q86XP3.S185.p_DDX42 Q86XP3_S185s _1_1_185_185 Q86XP3 Q86XP3|Q86XP3-2|A0A0A0MSJ0 ATP-dependent RNA helicase DDX42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22803.22803.5 27.5 27.5 2.336 5 1 1 0 885.027 4341.1324 S185s TMT10 163 (R) YMAENPTAGVVQEEEEDNLEYDsDGNPIAPTKK (I) Y(0.0)MAENPT(0.0)AGVVQEEEEDNLEY(0.0)DS(0.99)DGNPIAPT(0.0)KK K:TMT10,s:Phosphorylated S DDX42 103258.6 30 3 914.1 200.89 HUMAN 1 3.2689 14.1488 EDNRSEDSVRPWTCP-p O43166;S321-p EDNRSEDSVRPWTCP 0.310241942410331 0.327079353946646 -0.152666666666667 -0.109666666666667 9.50254122425591 6.42688581683855 -0.152666666666667 -0.109666666666667 0.112136211014143 0.227672941350447 -1.89539868683702 -1.35992506666632 O43166 SIPA1L1 O43166.S321.p_SIPA1L1 O43166_S318sS321s_2_2_318_321 O43166 O43166|O43166-2|O43166-3 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14867.14867.4 7.43 7.43 4.221 5 2 2 0 749.8389 2836.3936 S318s S321s TMT10 310 (K) SSDLEDNRsEDsVRPWTCPK (C) S(0.0)S(0.0)DLEDNRS(0.99)EDS(0.99)VRPWT(0.0)CPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SIPA1L1 201223.1 2 36 46.1 777.88 HUMAN 1 -9.5025 -6.4269 EDNVDEQYQEEAEEE-p O00461;Y613-p EDNVDEQYQEEAEEE 0.796289087702069 0.0201924503100698 0.0656666666666667 0.357 1.91112840861773 23.2112188530311 0.0656666666666666 0.357 0.644001915535589 0.00477395273259422 0.48902958461857 4.59932517179366 O00461 GOLIM4 O00461.Y613.p_GOLIM4 O00461_Y613yT626t_2_2_613_626 O00461 O00461|F8W785 Golgi integral membrane protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25076.25076.5 12.96 12.96 4.286 3 2 2 0 1139.8832 5534.4713 N608n Y613y T626t TMT10 587 (K) QENTEVEEHLVMAGNPDQQEDnVDEQyQEEAEEEVQEDLtEEK (K) Q(0.0)EN(0.0)T(0.0)EVEEHLVM(0.0)AGN(0.0)PDQQEDN(0.99)VDEQY(0.99)QEEAEEEVQEDLT(0.99)EEK K:TMT10,n:Deamidated,y:Phosphorylated Y,t:Phosphorylated T GOLIM4 81935.9 1 2 3579.1 47.78 HUMAN 1 1.9111 23.2112 EDPCHPDSPPAPRAT-p Q8TEY5;S100-p EDPCHPDSPPAPRAT 0.265293140605411 0.0109636238301829 0.173 0.413 10.9314651731616 27.4627852742847 0.173 0.413 0.080696274044006 0.00179358297375874 2.14410687681142 5.68777759475504 Q8TEY5 CREB3L4 Q8TEY5.S100.p_CREB3L4 Q8TEY5_S100s _1_1_100_100 Q8TEY5 Q8TEY5 Cyclic AMP-responsive element-binding protein 3-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25162.25162.5 27.09 27.09 4.119 7 1 1 0 822.5622 4028.8116 S100s TMT10 71 (K) LFIDPNEVYCSEASPGSDSGISEDPCHPDsPPAPR (A) LFIDPNEVY(0.0)CS(0.0)EAS(0.0)PGS(0.0)DS(0.0)GIS(0.0)EDPCHPDS(0.99)PPAPR C:Carbamidomethylation,s:Phosphorylated S CREB3L4 43945 2 2 2946.1 65.12 HUMAN 1 10.9315 27.4628 EDPDKRISIRASDKR-p Q92769;S407-p EDPDKRISIRASDKR 0.240806433965032 0.0348300814649303 -0.199 -0.363666666666667 11.8182095053192 19.6308344519406 -0.199 -0.363666666666667 0.0657929030215713 0.0108872088677469 -2.30013095263588 -3.7966982490434 Q92769 HDAC2 Q92769.S407.p_HDAC2 Q92769_S394sS407s_2_2_394_407 Q92769 Q92769|Q92769-3 Histone deacetylase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20270.20270.5 16.81 16.81 99 2 2 2 0 935.4356 4513.2128 S394s S407s TMT10 373 (R) MLPHAPGVQMQAIPEDAVHEDsGDEDGEDPDKRIsIR (A) MLPHAPGVQMQAIPEDAVHEDS(1.0)GDEDGEDPDKRIS(1.0)IR K:TMT10,s:Phosphorylated S HDAC2 55933.8 2 12 700.2 240.49 HUMAN 1 -11.8182 -19.6308 EDPEEDGSPDPEPSP-p O00204;S318-p EDPEEDGSPDPEPSP 0.606224103595786 0.105858984291583 0.0993333333333333 0.273666666666667 4.01925244867849 12.8854726983102 0.0993333333333334 0.273666666666667 0.396346251485394 0.051457979565554 0.920807943236679 2.48909874568449 O00204 SULT2B1 O00204.S318.p_SULT2B1 O00204_S318s _1_1_318_318 O00204 O00204|O00204-2 Sulfotransferase family cytosolic 2B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27756.27756.5 25.84 25.84 5.806 6 1 1 0 974.8459 4790.2344 S318s TMT10 303 (R) GMPTFPWDEDPEEDGsPDPEPSPEPEPKPSLEPNTSLER (E) GMPT(0.0)FPWDEDPEEDGS(0.99)PDPEPS(0.0)PEPEPKPS(0.0)LEPNT(0.0)S(0.0)LER K:TMT10,s:Phosphorylated S SULT2B1 41535.2 3 3 3557.1 48.28 HUMAN 1 4.0193 12.8855 EDPEEDLSETETPKL-p F5GWX5;S44-p EDPEEDLSETETPKL 0.783485670526388 0.928193312474012 0.0383333333333333 0.0103333333333334 2.03791357164925 0.455736204941461 0.0383333333333333 0.0103333333333334 0.625473109073414 0.900381119499636 0.517181996816524 0.13115594358595 F5GWX5 CHD4 F5GWX5.S44.p_CHD4 F5GWX5_S44s_1_1_44_44 F5GWX5 Q14839-2|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30195.30195.4 14.73 11.49 1.159 9 1 1 0 1394.3572 5476.4166 M20m N25n N26n S44s Acetyl 2 (M) ASGLGSPSPCSAGSEEEDmDALLnnSLPPPHPENEEDPEEDLsETETPK (L) AS(0.0)GLGS(0.0)PS(0.0)PCS(0.0)AGS(0.0)EEEDM(1.0)DALLN(0.99)N(0.99)S(0.0)LPPPHPEN(0.0)EEDPEEDLS(0.99)ET(0.0)ET(0.0)PK C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,n:Deamidated,s:Phosphorylated S CHD4 218583 5 1 49.1 753.68 HUMAN 1 2.0379 0.4557 EDPEQEGSAEEEELG-p O15085-2;S1195-p EDPEQEGSAEEEELG 0.404650191418887 0.389994302378838 0.116 0.087 7.25501498129255 5.43819443160215 0.116 0.087 0.188147521592653 0.285877882646005 1.50558253921226 1.18353058812126 O15085 ARHGEF11 O15085.2.S1195.p_ARHGEF11 O15085-2_S1195s _1_1_1195_1195 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24771.24771.3 29.54 29.54 8.199 4 1 1 0 1358.287 3992.8869 S1195s TMT10 1183 (K) HQVLLEDPEQEGsAEEEELGVLPCPSTSLDGENR (G) HQVLLEDPEQEGS(0.99)AEEEELGVLPCPS(0.0)T(0.0)S(0.0)LDGENR C:Carbamidomethylation,s:Phosphorylated S ARHGEF11 173153.4 3 15 228.1 424.05 HUMAN 1 7.255 5.4382 EDPEWRQTPPPVSAT-p Q6NT76-5;T253-p EDPEWRQTPPPVSAT 0.407878856431238 0.0125994963231798 0.302666666666667 0.465 7.18750257164183 26.4902638238076 0.302666666666667 0.465 0.191095184341447 0.00224374561730938 1.49379628341944 5.42408750880398 Q6NT76 HMBOX1 Q6NT76.5.T253.p_HMBOX1 Q6NT76-5_T253t _1_1_253_253 Q6NT76-5 Q6NT76-5|Q6NT76-3|Q6NT76-2|H0YKJ1|E5RGZ2|Q6NT76-4 Isoform 5 of Homeobox-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24778.24778.5 17.23 10.83 3.522 8 1 1 0 837.6225 4104.1174 T253t TMT10 230 (K) TNPGATLSMRPAPIPIEDPEWRQtPPPVSATSGTFR (L) T(0.0)NPGAT(0.0)LS(0.0)MRPAPIPIEDPEWRQT(0.99)PPPVS(0.0)AT(0.0)S(0.0)GT(0.0)FR t:Phosphorylated T HMBOX1 50037.1 1 3 2310.1 88.47 HUMAN 1 7.1875 26.4903 EDPLLLASPAPPLSV-p O14976;S939-p EDPLLLASPAPPLSV 0.986625341798263 0.673614682268759 -0.00733333333333334 0.291333333333333 0.119500741594243 2.34615915222924 -0.00733333333333335 0.291333333333333 0.972859055762952 0.582618250513613 -0.0356244641345796 0.584094171441914 O14976 GAK O14976.S939.p_GAK O14976_S939s _1_1_939_939 O14976 O14976|O14976-2 Cyclin-G-associated kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.37084.37084.5 26.71 20.24 1.67 10 1 1 0 1063.744 5234.698 S939s TMT10 903 (K) APSSNTDLLSCLLGPPEAASQGPPEDLLSEDPLLLAsPAPPLSVQSTPR (G) APS(0.0)S(0.0)NT(0.0)DLLS(0.0)CLLGPPEAAS(0.0)QGPPEDLLS(0.0)EDPLLLAS(0.99)PAPPLS(0.0)VQS(0.0)T(0.0)PR C:Carbamidomethylation,s:Phosphorylated S GAK 144671.4 3 7 746.1 233.2 HUMAN 1 -0.1195 2.3462 EDPLPQDSFEGVDED-p P57737;S915-p EDPLPQDSFEGVDED 0.207841226704015 0.784997486043184 0.205 -0.0343333333333333 13.1642401939151 1.4578326857198 0.205 -0.0343333333333333 0.0482587402217212 0.714852979132985 2.54070468061469 -0.385040666110131 P57737 CORO7 P57737.S915.p_CORO7 P57737_S915s _1_1_915_915 P57737 P57737 Coronin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25141.25141.3 10.15 10.15 99 1 1 1 0 957.749 2791.2532 S915s TMT10 904 (K) LGNREDPLPQDsFEGVDEDEWD (-) LGNREDPLPQDS(1.0)FEGVDEDEWD s:Phosphorylated S CORO7 101687.3 1 1 3419.2 51.62 HUMAN 1 13.1642 -1.4578 EDPPLPPTPMNSLVD-p Q86TP1;T410-p EDPPLPPTPMNSLVD 0.20228767245005 0.526857895615428 -0.249 -0.0746666666666667 13.464667159302 3.73890126016283 -0.249 -0.0746666666666667 0.0450332493178998 0.422775560500091 -2.59514430216907 -0.866739404254006 Q86TP1 PRUNE Q86TP1.T410.p_PRUNE Q86TP1_T410tS414s_2_2_410_414 Q86TP1 Q86TP1|Q86TP1-2|Q86TP1-3|Q86TP1-4|Q86TP1-7|Q86TP1-5|Q86TP1-6 Exopolyphosphatase PRUNE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33202.33202.5 23.16 16.43 2.129 6 2 2 0 939.8425 4519.2624 T410t M412m S414s TMT10 390 (R) ASNSLISGLSQDEEDPPLPPtPmNsLVDECPLDQGLPK (L) AS(0.0)NS(0.0)LIS(0.0)GLS(0.0)QDEEDPPLPPT(0.99)PM(1.0)NS(0.99)LVDECPLDQGLPK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,m:Oxidized methionine,s:Phosphorylated S PRUNE1 50826.3 12 5 3186.1 58.23 HUMAN 1 -13.4647 -3.7389 EDPRGPGSPHPACHR-p Q6UXD7;S507-p EDPRGPGSPHPACHR 0.820904102287946 0.175568134293142 0.049 -0.203 1.65061968525353 9.93610603189361 0.049 -0.203 0.683814068393053 0.101482088592171 0.429959626759919 -1.96982114312909 Q6UXD7 MFSD7 Q6UXD7.S507.p_MFSD7 Q6UXD7_S507s _1_1_507_507 Q6UXD7 Q6UXD7 Major facilitator superfamily domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4753.4753.4 14.27 12.43 4.664 2 1 1 0 577.5218 2227.0988 S507s TMT10 496 (R) GASLEDPRGPGsPHPACHR (A) GAS(0.0)LEDPRGPGS(0.99)PHPACHR C:Carbamidomethylation,s:Phosphorylated S MFSD7 59453.1 1 1 6068.1 14.27 HUMAN 1 1.6506 -9.9361 EDPSLRRSAGGLLRS-p Q9NP71;S37-p EDPSLRRSAGGLLRS 0.274203367926357 0.0988389516098073 -0.543666666666667 -0.259 10.6382893007652 13.2848386187738 -0.543666666666667 -0.259 0.0863318544612408 0.0469370875533527 -2.09285484606115 -2.56108011131233 Q9NP71 MLXIPL Q9NP71.S37.p_MLXIPL Q9NP71_S37s _1_1_37_37 Q9NP71 Q9NP71|Q9NP71-3|Q9NP71-2|Q9NP71-4|Q9NP71-6|A0A0C4DG26 Carbohydrate-responsive element-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12334.12334.2 9.37 1.61 99 1 1 1 0 491.7678 902.5621 S37s TMT10 37 (R) sAGGLLR (S) S(1.0)AGGLLR s:Phosphorylated S MLXIPL 93755.5 1 4 1023.1 187.4 HUMAN 1 -10.6383 -13.2848 EDPTEMASLDSDEET-p Q9BVV8;S117-p EDPTEMASLDSDEET 0.561099472967173 0.983447809367037 0.0793333333333333 0.00233333333333335 4.62193172114926 0.105870533709543 0.0793333333333333 0.00233333333333336 0.344990255183212 0.975917142384494 1.03429592692567 0.0316059328773591 Q9BVV8 C19orf24 Q9BVV8.S117.p_C19orf24 Q9BVV8_S117sS120s_2_2_117_120 Q9BVV8 Q9BVV8 Uncharacterized membrane protein C19orf24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32195.32827.3 20.84 20.84 2.366 7 2 2 0 1136.8168 3248.499 S117s S120s TMT10 103 (R) YGLLANTEDPTEMAsLDsDEETVFESR (N) Y(0.0)GLLANT(0.0)EDPT(0.0)EMAS(0.99)LDS(0.99)DEET(0.0)VFES(0.0)R s:Phosphorylated S C19orf24 14363.3 16 2 3516.1 49.28 HUMAN 1 4.6219 0.1059 EDQEDEISVSEELEP-p O95248-4;S1094-p EDQEDEISVSEELEP 0.948723601950881 0.101112939972182 -0.01 0.229 0.453433413893301 13.1481590532606 -0.01 0.229 0.900858661688101 0.0484377648682754 -0.130535094358221 2.53638835945286 O95248 SBF1 O95248.4.S1094.p_SBF1 O95248-4_S1094s _1_1_1094_1094 O95248-4 O95248-4|G5E933 Isoform 4 of Myotubularin-related protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23129.23129.4 21.03 18.58 1.77 8 1 1 0 1051.5151 4123.0607 S1094s TMT10 1082 (R) GQPPPEDQEDEIsVSEELEPSTLTPSSALKPSDR (M) GQPPPEDQEDEIS(0.99)VS(0.0)EELEPS(0.0)T(0.0)LT(0.0)PS(0.0)S(0.0)ALKPS(0.0)DR K:TMT10,s:Phosphorylated S SBF1 213155.5 1 3 1740.1 118.23 HUMAN 1 -0.4534 13.1482 EDQKELASPVSPELR-p Q5T4S7-2;S178-p EDQKELASPVSPELR 0.547885296654045 0.506212498205477 0.113333333333333 -0.132 4.82442858446728 3.96188804547302 0.113333333333333 -0.132 0.329273774116777 0.401616174863257 1.07178329861827 -0.909684437445472 Q5T4S7 UBR4 Q5T4S7.2.S178.p_UBR4 Q5T4S7-2_S178s _1_1_178_178 Q5T4S7-2 Q5T4S7-2|Q5T4S7-4|Q5T4S7-3|Q5T4S7-5 Isoform 2 of E3 ubiquitin-protein ligase UBR4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16367.16367.3 13.19 13.19 11.419 2 1 1 0 502.9309 1426.8103 S178s TMT10 175 (K) ELAsPVSPELR (Q) ELAS(0.99)PVS(0.0)PELR s:Phosphorylated S UBR4 583136.9 1 2 528.1 281.83 HUMAN 1 4.8244 -3.9619 EDQNEDESPKKNTLW-p Q9UKB1-3;S28-p EDQNEDESPKKNTLW 0.104209357384164 0.00436830434740437 -0.441666666666667 -0.703333333333333 20.7281198578132 34.6773694648596 -0.441666666666667 -0.703333333333333 0.00845644861432464 0.000340614438453247 -4.03698459888078 -7.97619405481974 Q9UKB1 FBXW11 Q9UKB1.3.S28.p_FBXW11 Q9UKB1-3_S28s _1_1_28_28 Q9UKB1-3 Q9UKB1-3 Isoform B of F-box/WD repeat-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33275.33275.4 15.93 15.93 2.706 5 1 1 0 1098.5253 4311.1173 S28s Acetyl 1 (-) MEPDSVIEDKTIELMNTSVMEDQNEDEsPKK (N) MEPDS(0.0)VIEDKT(0.0)IELMNT(0.0)S(0.0)VMEDQNEDES(0.99)PKK K:TMT10,s:Phosphorylated S FBXW11 61809.9 5 1 4031.1 38.87 HUMAN 1 -20.7281 -34.6774 EDQQNRLSEEIEKKW-p Q9H2D6;S2023-p EDQQNRLSEEIEKKW 0.710152958494351 0.117323817147181 -0.0573333333333334 -0.167 2.79530684731713 12.2691623625765 -0.0573333333333334 -0.167 0.525374893852824 0.0593039694980924 -0.678521063294453 -2.37895101585878 Q9H2D6 TRIOBP Q9H2D6.S2023.p_TRIOBP Q9H2D6_S2023s _1_1_2023_2023 Q9H2D6 Q9H2D6|Q9H2D6-2|Q9H2D6-3 TRIO and F-actin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16165.16165.4 11.43 11.43 6.111 2 1 1 0 731.1339 2841.5471 S2023s TMT10 2008 (R) RGLGAPLTEDQQNRLsEEIEK (K) RGLGAPLT(0.0)EDQQNRLS(0.99)EEIEK K:TMT10,s:Phosphorylated S TRIOBP 264280.7 1 8 1168.1 170.4 HUMAN 1 -2.7953 -12.2692 EDQSLENSEADVKES-p A0A087WXK5;S1362-p EDQSLENSEADVKES 0.350372223299442 0.0353703287645081 -0.357 0.329333333333333 8.46274032502139 19.5351736278587 -0.357 0.329333333333333 0.142470834296165 0.011129678962439 -1.71535456535101 3.77646668992808 A0A087WXK5 NotFound A0A087WXK5.S1362.p_NotFound A0A087WXK5_S1358sS1362s_2_2_1358_1362 A0A087WXK5 A0A087WXK5|Q9BZC7-3|J3QSS3|Q9BZC7-2 ATP-binding cassette sub-family A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14306.14306.2 15.72 15.72 6.68 3 2 2 0 1199.032 2237.1185 S1358s S1362s TMT10 1352 (K) VSEEDQsLENsEADVK (E) VS(0.0)EEDQS(0.99)LENS(0.99)EADVK K:TMT10,s:Phosphorylated S ABCA2 275398.6 6 11 1069.1 180.75 HUMAN 1 -8.4627 19.5352 EDRGQGDSSEEAPKQ-p O60279;S240-p EDRGQGDSSEEAPKQ 0.989051104038883 0.0669749232046015 0.00433333333333333 -0.472666666666667 0.0970646894118059 15.6169598800416 0.00433333333333333 -0.472666666666667 0.977897939541773 0.0274349398269962 0.0290081135922011 -2.99293095878147 O60279 SUSD5 O60279.S240.p_SUSD5 O60279_S240sS241s_2_2_240_241 O60279 O60279 Sushi domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3115.3115.3 7.38 7.38 7.383 3 2 2 0 903.7017 2549.1549 S240s S241s Hydrogen 229 (R) TEADEDRGQGDssEEAPKQDR (L) T(0.0)EADEDRGQGDS(0.99)S(0.99)EEAPKQDR K:TMT10-Lys-Only,s:Phosphorylated S SUSD5 68818.7 1 1 7175.1 7.38 HUMAN 1 0.0971 -15.617 EDRPAEDSEDEVLAE-p O75528;S338-p EDRPAEDSEDEVLAE 0.709670809730963 0.0635782891077858 -0.081 0.224666666666667 2.80011030826852 15.9357514155583 -0.081 0.224666666666667 0.52479413061528 0.0254932296622213 -0.679511554643167 3.05371656552258 O75528 TADA3 O75528.S338.p_TADA3 O75528_S338s _1_1_338_338 O75528 O75528|O75528-2 Transcriptional adapter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29648.29648.5 29.35 27.88 4.265 2 1 1 0 787.8069 3855.0275 S338s TMT10 318 (R) IKEELIAQGLLESEDRPAEDsEDEVLAELR (K) IKEELIAQGLLES(0.0)EDRPAEDS(0.99)EDEVLAELR K:TMT10,s:Phosphorylated S TADA3 49129.7 8 4 1465.1 140.05 HUMAN 1 -2.8001 15.9358 EDRPEPLSPKESKKR-p Q9NZT2;S378-p EDRPEPLSPKESKKR 0.299833271733525 0.830092358242036 -0.149666666666667 -0.022 9.83160830310893 1.13109711330018 -0.149666666666667 -0.022 0.103953512819729 0.770708748278323 -1.95246937805101 -0.306416277729175 Q9NZT2 OGFR Q9NZT2.S378.p_OGFR Q9NZT2_S378s _1_1_378_378 Q9NZT2 Q9NZT2|Q9NZT2-2|A0A0A0MRN5 Opioid growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7481.7481.4 19.74 19.74 11.793 2 1 1 0 651.0648 2521.2683 S378s TMT10 361 (R) SQGDEAGGHGEDRPEPLsPK (E) S(0.0)QGDEAGGHGEDRPEPLS(0.99)PK K:TMT10,s:Phosphorylated S OGFR 73893.9 9 3 620.1 259.74 HUMAN 1 -9.8316 -1.1311 EDRQTPRSPDSTANV-p O75044;S206-p EDRQTPRSPDSTANV 0.849932017970877 0.138881378491189 0.0326666666666667 -0.23 1.36715143800838 11.2945741710524 0.0326666666666667 -0.23 0.729936122493182 0.0742236971054392 0.36359770028546 -2.20677312254638 O75044 SRGAP2 O75044.S206.p_SRGAP2 O75044_S206s _1_1_206_206 O75044 O75044|B7ZM87|A0A075B7B5|A0A286YEY3|P0DMP2|E9PDX4|A0A087WW56 SLIT-ROBO Rho GTPase-activating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8096.8096.4 10.83 9.23 2.219 4 1 1 0 617.3249 2386.3091 S206s TMT10 202 (R) QTPRsPDSTANVRIEEK (H) QT(0.0)PRS(0.99)PDS(0.0)T(0.0)ANVRIEEK K:TMT10,s:Phosphorylated S SRGAP2 122066.6 2 2 489.1 294.64 HUMAN 1 1.3672 -11.2946 EDRRRTYSFEQPWPN-p Q8TEW0;S1178-p EDRRRTYSFEQPWPN 0.177540019132473 0.0096518963537548 -0.233333333333333 -0.607333333333333 14.8794228441542 28.4066583059158 -0.233333333333333 -0.607333333333333 0.0325130502747176 0.00144322541924512 -2.85586727022597 -5.95283530081259 Q8TEW0 PARD3 Q8TEW0.S1178.p_PARD3 Q8TEW0_S1178s _1_1_1178_1178 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11|Q8TEW0-4|Q8TEW0-6 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17479.17479.3 10.94 10.94 1.123 5 1 1 0 834.7327 2422.2101 S1178s TMT10 1176 (R) TYsFEQPWPNARPATQSGR (H) T(0.0)Y(0.0)S(0.99)FEQPWPNARPAT(0.0)QS(0.0)GR s:Phosphorylated S PARD3 151933.9 1 22 65.1 692.2 HUMAN 1 -14.8794 -28.4067 EDRVHYRSPPLATGY-p Q86U06;S128-p EDRVHYRSPPLATGY 0.53970844284476 0.0272025018745636 0.0853333333333333 -0.287666666666667 4.94876796932614 21.2360134413242 0.0853333333333333 -0.287666666666667 0.319980271873008 0.00752313154789654 1.0946611374028 -4.14518885148065 Q86U06 RBM23 Q86U06.S128.p_RBM23 Q86U06_S128s _1_1_128_128 Q86U06 Q86U06|Q86U06-2|Q86U06-5|Q86U06-3 Probable RNA-binding protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9580.9580.3 13.72 7.43 2.981 4 1 1 0 609.3155 1745.9649 S128s TMT10 124 (R) VHYRsPPLATGYR (Y) VHY(0.0)RS(0.99)PPLAT(0.0)GY(0.0)R s:Phosphorylated S RBM23 49015.1 5 4 1534.1 133.46 HUMAN 1 4.9488 -21.236 EDSAPQASPGPSKQQ-p Q9P107;S243-p EDSAPQASPGPSKQQ 0.93306667659969 0.221694218247989 -0.0143333333333333 -0.120333333333333 0.593051432786135 8.61591079023364 -0.0143333333333334 -0.120333333333333 0.872358218103494 0.137533634833858 -0.168434550822103 -1.74127791366972 Q9P107 GMIP Q9P107.S243.p_GMIP Q9P107_S243s _1_1_243_243 Q9P107 Q9P107|Q9P107-2 GEM-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7773.7773.3 9.72 9.72 4.127 5 1 1 0 755.6982 2185.1137 S243s TMT10 231 (R) SQGSPEDSAPQAsPGPSK (Q) S(0.0)QGS(0.0)PEDS(0.0)APQAS(0.99)PGPS(0.0)K K:TMT10,s:Phosphorylated S GMIP 107650.9 1 3 1251.1 161.9 HUMAN 1 -0.5931 -8.6159 EDSASVFSPSFGLKQ-p Q02880;S1476-p EDSASVFSPSFGLKQ 0.375072477437412 0.16067471249406 0.152666666666667 -0.146 7.88473695740769 10.4448656860269 0.152666666666667 -0.146 0.162751988794829 0.0902637622854601 1.61515900449561 -2.05824165835554 Q02880 TOP2B Q02880.S1476.p_TOP2B Q02880_S1476s _1_1_1476_1476 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24977.24977.4 23.54 23.54 1.548 7 1 1 0 891.4258 3482.7054 S1476s TMT10 1457 (K) SEDDSAKFDSNEEDSASVFsPSFGLK (Q) S(0.0)EDDS(0.0)AKFDS(0.0)NEEDS(0.0)AS(0.0)VFS(0.99)PS(0.0)FGLK K:TMT10,s:Phosphorylated S TOP2B 184233.7 1 40 71.1 658.36 HUMAN 1 7.8847 -10.4449 EDSASVKSLDLPSIG-p Q9UMZ2;S812-p EDSASVKSLDLPSIG 0.111154875717767 0.0095308585684715 -0.479333333333333 0.432666666666667 19.9332091905994 28.5076599464642 -0.479333333333333 0.432666666666667 0.0101549801994872 0.00141004835213288 -3.86463098241079 5.98175005469251 Q9UMZ2 SYNRG Q9UMZ2.S812.p_SYNRG Q9UMZ2_S812s _1_1_812_812 Q9UMZ2 Q9UMZ2|Q9UMZ2-5|Q9UMZ2-7|Q9UMZ2-3|Q9UMZ2-8|Q9UMZ2-4|Q9UMZ2-9|Q9UMZ2-6 Synergin gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24547.24547.3 15.65 12.75 2.662 4 1 1 0 619.0045 1775.0315 S812s TMT10 812 (K) sLDLPSIGGSSVGK (E) S(0.99)LDLPS(0.0)IGGS(0.0)S(0.0)VGK K:TMT10,s:Phosphorylated S SYNRG 141393.5 2 9 236.1 418.49 HUMAN 1 -19.9332 28.5077 EDSDDDGSDEEIDES-p Q14669-3;S1370-p EDSDDDGSDEEIDES 0.975009344981545 0.159605376371289 0.00533333333333332 0.208 0.214350488792363 10.4811703455209 0.00533333333333332 0.208 0.951842190686661 0.0895123513356428 0.0632446995610108 2.06456387979792 Q14669 TRIP12 Q14669.3.S1370.p_TRIP12 Q14669-3_S1365sS1370s_2_2_1365_1370 Q14669-3 Q14669-3|Q14669-2 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29595.30384.3 12.23 12.23 2.411 4 2 2 0 1310.8682 3770.6586 S1365s S1370s TMT10 1358 (R) VREDDEDsDDDGsDEEIDESLAAQFLNSGNVR (H) VREDDEDS(0.99)DDDGS(0.99)DEEIDES(0.0)LAAQFLNS(0.0)GNVR s:Phosphorylated S TRIP12 227456.1 1 23 234.1 420.47 HUMAN 1 0.2144 10.4812 EDSDLKKSDIDEIVL-p P11021;S354-p EDSDLKKSDIDEIVL 0.806595725807555 0.60615478259257 0.0346666666666667 0.0736666666666667 1.79728515938625 2.95107377054565 0.0346666666666667 0.0736666666666667 0.661106586609386 0.506865372950706 0.463426217080683 0.710358418581558 P11021 HSPA5 P11021.S354.p_HSPA5 P11021_S354s _1_1_354_354 P11021 P11021 78 kDa glucose-regulated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26896.26896.4 13.15 13.15 1.264 4 1 1 0 814.6999 3175.8029 S354s TMT10 345 (K) VLEDSDLKKsDIDEIVLVGGSTR (I) VLEDS(0.0)DLKKS(0.99)DIDEIVLVGGS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S HSPA5 72445.7 1 2 3271.1 55.33 HUMAN 1 1.7973 2.9511 EDSDPERSDYEEQQL-p Q6P6C2;S69-p EDSDPERSDYEEQQL 0.233330589879481 0.143577657866048 0.233666666666667 0.187 12.1402952239483 11.1040760042777 0.233666666666667 0.187 0.0610900495806298 0.0775518923568785 2.35724401204991 2.17336211887686 Q6P6C2 ALKBH5 Q6P6C2.S69.p_ALKBH5 Q6P6C2_S64sS69s_2_2_64_69 Q6P6C2 Q6P6C2-1|Q6P6C2-3 RNA demethylase ALKBH5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10130.10130.5 15.4 15.4 1.256 4 2 2 0 750.3351 3587.7138 S64s S69s Hydrogen 59 (R) KYQEDsDPERsDYEEQQLQKEEEAR (K) KY(0.0)QEDS(0.99)DPERS(0.99)DY(0.0)EEQQLQKEEEAR K:TMT10-Lys-Only,s:Phosphorylated S ALKBH5 44597.5 14 7 578.1 267.46 HUMAN 1 12.1403 11.1041 EDSDVELSD______-p Q5VZL5;S1547-p EDSDVELSD______ 0.998180995519267 0.0192035253059585 -0.000333333333333343 0.335666666666667 0.0148903720400389 23.5974319484396 -0.000333333333333344 0.335666666666667 0.996577236187859 0.00436774027245446 -0.00449151889738514 4.6916649491462 Q5VZL5 ZMYM4 Q5VZL5.S1547.p_ZMYM4 Q5VZL5_S1547s _1_1_1547_1547 Q5VZL5 Q5VZL5|Q5VZL5-4|Q5VZL5-2|Q5VZL5-3 Zinc finger MYM-type protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10199.10199.2 15.39 15.39 11.233 3 1 1 0 916.931 1752.8904 S1547s TMT10 1537 (K) AKSEDSDVELsD (-) AKS(0.0)EDS(0.0)DVELS(0.99)D K:TMT10,s:Phosphorylated S ZMYM4 176265.3 3 17 535.1 278.69 HUMAN 1 -0.0149 23.5974 EDSESDGSQKSLRRG-p Q96T23;S1226-p EDSESDGSQKSLRRG 0.328847597933531 0.648631882286489 0.140666666666667 0.0446666666666667 9.02944087700501 2.56486133370392 0.140666666666667 0.0446666666666667 0.125042000246197 0.554005232541695 1.81345944982754 0.630473480375098 Q96T23 RSF1 Q96T23.S1226.p_RSF1 Q96T23_S1221sS1223sS1226s_3_3_1221_1226 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13469.13677.4 9.17 9.17 9.17 4 3 3 0 664.5453 2415.2607 S1221s S1223s S1226s TMT10 1214 (R) QINYKEDsEsDGsQK (S) QINY(0.0)KEDS(0.99)ES(0.99)DGS(0.99)QK K:TMT10,s:Phosphorylated S RSF1 165358.1 3 32 39.1 857.38 HUMAN 1 9.0294 2.5649 EDSGNPKSPDKAQAE-p O15417;S2543-p EDSGNPKSPDKAQAE 0.178333251217429 0.00575569388165388 -0.502666666666667 0.632666666666667 14.7895868982644 32.3981187817298 -0.502666666666667 0.632666666666666 0.0331926028917926 0.000575689252642772 -2.83908038951016 7.1836637731813 O15417 TNRC18 O15417.S2543.p_TNRC18 O15417_S2543s _1_1_2543_2543 O15417 O15417|H9KVB4 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19609.19609.4 21.93 21.93 1.109 4 1 1 0 878.436 3430.7581 S2543s TMT10 2520 (K) ATDGDLAQEPGPGLTFEDSGNPKsPDK (A) AT(0.0)DGDLAQEPGPGLT(0.0)FEDS(0.0)GNPKS(0.99)PDK K:TMT10,s:Phosphorylated S TNRC18 316168 2 29 75.1 647.68 HUMAN 1 -14.7896 32.3981 EDSIDNLSQNGEGRI-p Q3MIT2;S84-p EDSIDNLSQNGEGRI 0.21671898036419 0.299114512848365 0.189666666666667 0.232333333333333 12.795532752903 6.92098231552006 0.189666666666667 0.232333333333333 0.0525347566304033 0.203189737118643 2.4742874746348 1.44677917671373 Q3MIT2 PUS10 Q3MIT2.S84.p_PUS10 Q3MIT2_S84s_1_1_84_84 Q3MIT2 Q3MIT2 Putative tRNA pseudouridine synthase Pus10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24912.24912.3 16.9 16.9 2.596 2 1 1 0 776.3564 2246.1098 S84s N86n TMT10 73 (R) LQELEDSIDNLsQnGEGR (I) LQELEDS(0.0)IDN(0.0)LS(0.99)QN(0.99)GEGR s:Phosphorylated S,n:Deamidated PUS10 60984.8 1 1 5718.1 16.9 HUMAN 1 12.7955 6.921 EDSKWSHSDSDKKSR-p Q86X95;S353-p EDSKWSHSDSDKKSR 0.879970339303398 0.756302646018045 -0.0293333333333333 -0.0303333333333333 1.09123360711595 1.67727092825909 -0.0293333333333334 -0.0303333333333333 0.777815582281265 0.679630572868935 -0.296609409823556 -0.436035053240526 Q86X95 CIR1 Q86X95.S353.p_CIR1 Q86X95_S353s _1_1_353_353 Q86X95 Q86X95 Corepressor interacting with RBPJ 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5617.5617.4 16.34 16.34 1.341 4 1 1 0 579.7918 2236.1813 S353s Hydrogen 346 (R) EDSKWSHsDSDKK (S) EDS(0.0)KWS(0.0)HS(0.99)DS(0.0)DKK K:TMT10-Lys-Only,s:Phosphorylated S CIR1 52597.6 7 3 2295.1 89.34 HUMAN 1 -1.0912 -1.6773 EDSLGEGSRDAGRPG-p Q9C0C2;S1013-p EDSLGEGSRDAGRPG 0.722263165391049 0.639729181572277 0.0496666666666667 -0.0446666666666667 2.67353072337523 2.64162692356786 0.0496666666666666 -0.0446666666666667 0.540314879635498 0.544298713274184 0.653285156630708 -0.646548193968263 Q9C0C2 TNKS1BP1 Q9C0C2.S1013.p_TNKS1BP1 Q9C0C2_S1013s _1_1_1013_1013 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11538.11538.5 8.17 8.17 1.286 3 1 1 0 570.8961 2770.4848 S1013s TMT10 1001 (K) KIPSVEDSLGEGsRDAGRPGER (G) KIPS(0.0)VEDS(0.0)LGEGS(0.99)RDAGRPGER K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 2 42 4.1 2105.7 HUMAN 1 2.6735 -2.6416 EDSLLRNSDEEESAS-p Q70Z53;S278-p EDSLLRNSDEEESAS 0.224767265517543 0.0142842365185426 -0.364333333333333 0.407333333333333 12.4480612394966 25.585191185996 -0.364333333333333 0.407333333333333 0.056910693264367 0.00276363625513772 -2.41206972012879 5.18685871959022 Q70Z53 FRA10AC1 Q70Z53.S278.p_FRA10AC1 Q70Z53_S278s _1_1_278_278 Q70Z53 Q70Z53 Protein FRA10AC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20993.20993.3 19.95 19.95 2.323 6 1 1 0 1026.8119 2998.4529 S278s TMT10 270 (K) SEDSLLRNsDEEESASESELWK (G) S(0.0)EDS(0.0)LLRNS(0.99)DEEES(0.0)AS(0.0)ES(0.0)ELWK K:TMT10,s:Phosphorylated S FRA10AC1 37946.8 13 2 1518.1 134.45 HUMAN 1 -12.4481 25.5852 EDSLRRLSPAAYYAQ-p Q9C0C7-3;S693-p EDSLRRLSPAAYYAQ 0.172012241579796 0.00303565851504412 -0.418666666666667 -0.818 15.2198126952227 37.8290692267807 -0.418666666666667 -0.818 0.0300620595304237 0.000164851566099589 -2.91977980218578 -9.19650033086148 Q9C0C7 AMBRA1 Q9C0C7.3.S693.p_AMBRA1 Q9C0C7-3_S693s _1_1_693_693 Q9C0C7-3 Q9C0C7-3|A0A075B6T1|Q9C0C7-6 Isoform 3 of Activating molecule in BECN1-regulated autophagy protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11471.11471.3 8.78 8.78 8.782 3 1 1 0 535.6101 1524.8484 S693s TMT10 691 (R) RLsPAAYYAQR (M) RLS(0.99)PAAY(0.0)Y(0.0)AQR s:Phosphorylated S AMBRA1 140121.9 1 3 3439.1 51.06 HUMAN 1 -15.2198 -37.8291 EDSLSEESADARSFE-p Q9BVS4;S385-p EDSLSEESADARSFE 0.972247636963192 0.126350116164881 -0.00600000000000002 0.241333333333333 0.237095535023807 11.8461905041726 -0.00600000000000002 0.241333333333333 0.946870195405839 0.0653703709751467 -0.0697862996925321 2.30395017242606 Q9BVS4 RIOK2 Q9BVS4.S385.p_RIOK2 Q9BVS4_S380sS382sS385s_3_3_380_385 Q9BVS4 Q9BVS4|Q9BVS4-2 Serine/threonine-protein kinase RIO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13382.13382.3 7.62 7.62 7.618 5 3 3 0 983.4127 2708.3263 S380s S382s S385s TMT10 369 (R) SSGDPEQIKEDsLsEEsADAR (S) S(0.0)S(0.0)GDPEQIKEDS(0.99)LS(0.99)EES(0.99)ADAR K:TMT10,s:Phosphorylated S RIOK2 63738.3 1 9 1652.1 123.35 HUMAN 1 -0.2371 11.8462 EDSNLSPSPLRDLSG-p Q9C086;S132-p EDSNLSPSPLRDLSG 0.931090818381562 0.0793493508242918 0.015 0.193666666666667 0.613560147589841 14.602431307594 0.015 0.193666666666667 0.868248387147586 0.0346542791342402 0.173921835722076 2.80244450925792 Q9C086 INO80B Q9C086.S132.p_INO80B Q9C086_S132s _1_1_132_132 Q9C086 J3KQ70|Q9C086|F8WCL7 INO80 complex subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35011.35011.4 21.81 21.81 1.151 4 1 1 0 1202.5856 4727.3477 S132s TMT10 121 (R) AWLDEDSNLSPsPLRDLSGGLGGQEEEEEQRWLDALEK (G) AWLDEDS(0.0)NLS(0.0)PS(0.99)PLRDLS(0.0)GGLGGQEEEEEQRWLDALEK K:TMT10,s:Phosphorylated S INO80B 39035.8 2 5 1391.1 147.13 HUMAN 1 0.6136 14.6024 EDSPERCSDSDEEKK-p Q14677-3;S232-p EDSPERCSDSDEEKK 0.495458193368512 0.237616437264901 -0.104333333333333 -0.132666666666667 5.61700940184715 8.22073775391678 -0.104333333333333 -0.132666666666667 0.27434626993178 0.150635115437856 -1.21602331441935 -1.67288679850272 Q14677 CLINT1 Q14677.3.S232.p_CLINT1 Q14677-3_S227sS232s_2_2_227_232 Q14677-3 Q14677-3|Q14677-2 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5219.5219.5 10.43 10.43 2.512 3 2 2 0 586.6646 2769.3564 S227s S232s TMT10 223 (K) DREDsPERCsDSDEEKK (A) DREDS(0.99)PERCS(0.99)DS(0.0)DEEKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CLINT1 70350.7 3 23 632.1 256.73 HUMAN 2 -5.617 -8.2207 EDSQDDESDSDAEEE-p Q13769;S312-p EDSQDDESDSDAEEE 0.243449409823008 0.326429166774104 0.169833333333333 0.107333333333333 11.7319530666109 6.436325511876 0.169833333333333 0.107333333333333 0.0671126972402391 0.227178615671203 2.28487881762923 1.36159112849286 Q13769 THOC5 Q13769.S312.p_THOC5 Q13769_S312sS314s_2_2_312_314 Q13769 Q13769 THO complex subunit 5 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16571.16775.5 19.34 19.34 4.102 5 2 2 0 763.7509 3654.7862 S312s S314s TMT10 299 (K) ALFKPPEDSQDDEsDsDAEEEQTTKR (R) ALFKPPEDS(0.0)QDDES(0.99)DS(0.99)DAEEEQT(0.0)T(0.0)KR K:TMT10,s:Phosphorylated S THOC5 79248.1 16 6 2086.1 98.12 HUMAN 2 11.732 6.4363 EDSTLASSMGEATNS-p Q9Y4B4;S674-p EDSTLASSMGEATNS 0.108727233162321 0.00735602887085053 -0.49 -0.583 20.1893591550294 30.5124523650106 -0.49 -0.583 0.00957335325280759 0.000888699147366894 -3.9197072418456 -6.57890303584492 Q9Y4B4 RAD54L2 Q9Y4B4.S674.p_RAD54L2 Q9Y4B4_S674s _1_1_674_674 Q9Y4B4 Q9Y4B4 Helicase ARIP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11168.11168.3 17.33 17.33 1.232 6 1 1 0 879.7736 2557.3383 S674s TMT10 664 (K) GKGEDSTLASsMGEATNSK (F) GKGEDS(0.0)T(0.0)LAS(0.0)S(0.99)MGEAT(0.0)NS(0.0)K K:TMT10,s:Phosphorylated S RAD54L2 164135.1 2 1 1338.1 152.26 HUMAN 1 -20.1894 -30.5125 EDSWVPASPDTGLDP-p Q8N5L8;S100-p EDSWVPASPDTGLDP 0.553975545666649 0.309664284842538 0.109 -0.181333333333333 4.73541797401485 6.72861019180676 0.109 -0.181333333333333 0.336092021297426 0.212392404115438 1.05534115366635 -1.41304379747236 Q8N5L8 RPP25L Q8N5L8.S100.p_RPP25L Q8N5L8_S100s _1_1_100_100 Q8N5L8 Q8N5L8 Ribonuclease P protein subunit p25-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33531.33531.3 20.71 20.71 3.076 5 1 1 0 951.8016 2773.4246 S100s TMT10 89 (R) FLQTEDSWVPAsPDTGLDPLTVR (R) FLQT(0.0)EDS(0.0)WVPAS(0.99)PDT(0.0)GLDPLT(0.0)VR s:Phosphorylated S RPP25L 17802.1 2 2 3742.1 44.09 HUMAN 1 4.7354 -6.7286 EDTDSENSSSEKKLK-p Q96JK2;S934-p EDTDSENSSSEKKLK 0.17618853726982 0.271152757160184 0.390666666666667 0.188 14.9822408156134 7.46425107549557 0.390666666666667 0.188 0.0317523533170603 0.179297771797335 2.87512108533892 1.54160320924741 Q96JK2 DCAF5 Q96JK2.S934.p_DCAF5 Q96JK2_S934s _1_1_934_934 Q96JK2 Q96JK2|Q96JK2-3|Q96JK2-2 DDB1- and CUL4-associated factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16109.16109.3 15.98 15.98 1.282 5 1 1 0 741.0108 2141.0498 S934s TMT10 924 (R) IELEDTDSENsSSEK (K) IELEDT(0.0)DS(0.0)ENS(0.99)S(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S DCAF5 105045.5 1 9 948.1 196.79 HUMAN 1 14.9822 7.4643 EDTEPSDSGDEMMDP-p Q9NXX6;S63-p EDTEPSDSGDEMMDP 0.788556245854916 0.493968079574655 0.043 0.0726666666666667 1.98884995318435 4.0956225984934 0.043 0.0726666666666667 0.63257934131048 0.389437474490152 0.506331364451966 0.935203176132953 Q9NXX6 NSMCE4A Q9NXX6.S63.p_NSMCE4A Q9NXX6_S63s_1_1_63_63 Q9NXX6 Q9NXX6|Q9NXX6-2 Non-structural maintenance of chromosomes element 4 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22065.22065.4 20.93 20.93 0 5 1 1 0 1065.6982 4163.8165 S63s M68m TMT10 48 (R) EAPERPSLEDTEPSDsGDEMmDPASLEAEADQGLCR (Q) EAPERPS(0.0)LEDT(0.0)EPS(0.0)DS(0.99)GDEM(0.50)M(0.50)DPAS(0.0)LEAEADQGLCR C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine NSMCE4A 44414.7 2 2 3661.1 45.81 HUMAN 1 1.9888 4.0956 EDTKRRLSEVIYEPF-p Q8IWB9;S295-p EDTKRRLSEVIYEPF 0.327394528659194 0.940879622803415 -0.207333333333333 0.0136666666666667 9.07529713136988 0.377445694321046 -0.207333333333333 0.0136666666666667 0.123728653557405 0.916759524270521 -1.82139810944281 0.10948016521715 Q8IWB9 TEX2 Q8IWB9.S295.p_TEX2 Q8IWB9_S295s _1_1_295_295 Q8IWB9 Q8IWB9-2|A0A087WVA8 Testis-expressed protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33168.33168.3 19.11 14.81 6.817 3 1 1 0 711.0505 2051.1738 S295s Hydrogen 293 (R) RLsEVIYEPFQLLSK (I) RLS(0.99)EVIY(0.0)EPFQLLS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S TEX2 125928 10 11 300.1 376.78 HUMAN 1 -9.0753 0.3774 EDTLAPGSGGARQGE-p Q8TD43;S323-p EDTLAPGSGGARQGE 0.169693162392843 0.190573441385043 0.338666666666667 0.435333333333333 15.3675573254405 9.46736566398523 0.338666666666667 0.435333333333333 0.029056564715652 0.113048143222872 2.94767534477315 1.8885843761704 Q8TD43 TRPM4 Q8TD43.S323.p_TRPM4 Q8TD43_S323s _1_1_323_323 Q8TD43 Q8TD43|Q8TD43-3|Q8TD43-2 Transient receptor potential cation channel subfamily M member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37355.37355.4 14.06 14.06 2.573 5 1 1 0 1066.7687 4184.0801 S323s TMT10 288 (R) IENATQAQLPCLLVAGSGGAADCLAETLEDTLAPGsGGAR (Q) IENAT(0.0)QAQLPCLLVAGS(0.0)GGAADCLAET(0.0)LEDT(0.0)LAPGS(0.99)GGAR C:Carbamidomethylation,s:Phosphorylated S TRPM4 135782 1 3 2606.1 76.95 HUMAN 1 15.3676 9.4674 EDTQSSKSEEHHLYS-p O15042;S811-p EDTQSSKSEEHHLYS 0.540716629644627 0.0102217846735277 -0.270666666666667 -0.731333333333333 4.92732017889778 27.9555935455267 -0.270666666666667 -0.732695372485607 0.321564414498752 0.0016011818016213 -1.09072215570334 -5.82501671081004 O15042 U2SURP O15042.S811.p_U2SURP O15042_S811s _1_1_811_811 O15042 O15042|O15042-2 U2 snRNP-associated SURP motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14355.14355.4 17.44 17.44 6.722 5 1 1 0 764.6319 2975.5387 S811s TMT10 811 (K) sEEHHLYSNPIKEEMTESK (F) S(0.99)EEHHLY(0.0)S(0.0)NPIKEEMT(0.0)ES(0.0)K K:TMT10,s:Phosphorylated S U2SURP 118746.2 1 12 360.1 345.29 HUMAN 1 -4.9273 -27.9556 EDTVVIASKPYAFDR-p P33176;S43-p EDTVVIASKPYAFDR 0.977130047691108 0.889469027764128 0.00533333333333333 -0.0163333333333333 0.197507113709013 0.713916314692191 0.00533333333333335 -0.0163333333333333 0.955540917032527 0.848415059153951 0.0583804214155269 -0.200474017691079 P33176 KIF5B P33176.S43.p_KIF5B P33176_S43s _1_1_43_43 P33176 P33176 Kinesin-1 heavy chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22281.22281.3 11.64 11.64 4.223 3 1 1 0 861.11 2501.344 S43s TMT10 33 (K) FQGEDTVVIAsKPYAFDR (V) FQGEDT(0.0)VVIAS(0.99)KPY(0.0)AFDR K:TMT10,s:Phosphorylated S KIF5B 110424.6 1 1 2011.1 102.48 HUMAN 1 0.1975 -0.7139 EDVDCKQSMRSEDEA-p Q05655-2;S130-p EDVDCKQSMRSEDEA 0.415209884750466 0.0197263100945659 -0.382666666666667 0.477333333333333 7.04210110161697 23.3965122741871 -0.382666666666667 0.477333333333333 0.197601342039409 0.0045745541476941 -1.46838079390807 4.64347616532253 Q05655 PRKCD Q05655.2.S130.p_PRKCD Q05655-2_S130s _1_1_130_130 Q05655-2 Q05655-2 Isoform 2 of Protein kinase C delta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33373.33373.4 23.1 23.1 2.729 4 1 1 0 944.4656 3694.8734 S130s TMT10 114 (K) VLMSVQYFLEDVDCKQsMRSEDEAK (F) VLMS(0.0)VQY(0.0)FLEDVDCKQS(0.99)MRS(0.0)EDEAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRKCD 82263.9 2 2 687.1 243.52 HUMAN 1 -7.0421 23.3965 EDVEVAESPLRVLAE-p Q99567;S517-p EDVEVAESPLRVLAE 0.550309260615908 0.332399441586999 -0.084 0.121666666666667 4.78575547226276 6.33791981799694 -0.084 0.121666666666667 0.332218989389797 0.232384960640059 -1.06464633496944 1.34420867364581 Q99567 NUP88 Q99567.S517.p_NUP88 Q99567_S517s _1_1_517_517 Q99567 Q99567 Nuclear pore complex protein Nup88 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29683.29683.3 21.45 21.45 6.348 3 1 1 0 1000.1738 2918.5399 S517s TMT10 510 (R) EDVEVAEsPLRVLAETPDSFEK (H) EDVEVAES(0.99)PLRVLAET(0.0)PDS(0.0)FEK K:TMT10,s:Phosphorylated S NUP88 84681.5 5 8 1211.1 166.39 HUMAN 1 -4.7858 6.3379 EDVLGDETEEEETKP-p P82979;T60-p EDVLGDETEEEETKP 0.132590951458851 0.00569048608667047 0.269 0.606 18.1096291942706 32.5175518651936 0.269 0.606 0.0154538638080993 0.000560073227973518 3.48448616826699 7.2234673341979 P82979 SARNP P82979.T60.p_SARNP P82979_T60t_1_1_60_60 P82979 F8VZQ9|P82979 SAP domain-containing ribonucleoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26419.26419.5 16.73 16.73 3.638 3 1 1 0 1198.989 5909.9525 N51n T60t TMT10 38 (R) LQAYLEEHAEEEAnEEDVLGDEtEEEETKPIELPVKEEEPPEK (T) LQAY(0.0)LEEHAEEEAN(1.0)EEDVLGDET(0.99)EEEET(0.0)KPIELPVKEEEPPEK K:TMT10,n:Deamidated,t:Phosphorylated T SARNP 23727.4 2 1 3073.1 61.43 HUMAN 1 18.1096 32.5176 EDVSKRLSLPMDIRL-p Q07002-2;S98-p EDVSKRLSLPMDIRL 0.134150744259901 0.951627785467761 -0.347333333333333 -0.00766666666666665 17.9440794716009 0.306835719092072 -0.347333333333333 -0.00766666666666665 0.0160543250870287 0.931786530296121 -3.4509569033147 -0.0896465021348932 Q07002 CDK18 Q07002.2.S98.p_CDK18 Q07002-2_S98s _1_1_98_98 Q07002-2 Q07002-3|Q07002-2 Isoform 2 of Cyclin-dependent kinase 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30724.30724.4 14.35 14.35 99 1 1 1 0 656.3726 2542.4944 S98s TMT10 96 (K) RLsLPMDIRLPQEFLQK (L) RLS(1.0)LPMDIRLPQEFLQK K:TMT10,s:Phosphorylated S CDK18 54765.8 6 5 1225.1 164.54 HUMAN 1 -17.9441 -0.3068 EDVTPPLSPDDLKYI-p Q9Y4B5;S1421-p EDVTPPLSPDDLKYI 0.0386603595331013 0.0320849526179946 -0.650666666666667 -0.291666666666667 32.1032525279805 20.1549440760278 -0.650666666666667 -0.291666666666667 0.000616133393025041 0.00964951737380614 -7.09845906518682 -3.90858856727142 Q9Y4B5 MTCL1 Q9Y4B5.S1421.p_MTCL1 Q9Y4B5_T1417tS1421s_2_2_1417_1421 Q9Y4B5 Q9Y4B5|Q9Y4B5-3|Q9Y4B5-2|Q9Y4B5-4 Microtubule cross-linking factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22627.22627.4 14.73 14.73 3.989 6 2 2 0 758.3929 2870.5966 T1417t S1421s TMT10 1406 (K) GLPSTSSKEDVtPPLsPDDLK (Y) GLPS(0.0)T(0.0)S(0.0)S(0.0)KEDVT(0.99)PPLS(0.99)PDDLK K:TMT10,t:Phosphorylated T,s:Phosphorylated S MTCL1 210777.5 2 9 1389.1 147.22 HUMAN 1 -32.1033 -20.1549 EDWNEDLSETKIFTA-p Q14157-5;S254-p EDWNEDLSETKIFTA 0.200206590510805 0.110506057626177 -0.213333333333333 -0.177 13.5915224219457 12.6300866959497 -0.213333333333333 -0.177 0.0437368758397856 0.0545746966519555 -2.6182223933796 -2.44332406859251 Q14157 UBAP2L Q14157.5.S254.p_UBAP2L Q14157-5_S254s _1_1_254_254 Q14157-5 Q14157-5|F8W726|Q14157-3|Q14157-1|Q14157-4 Isoform 5 of Ubiquitin-associated protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22983.22983.3 19.36 19.36 2.757 5 1 1 0 927.0882 2699.2725 S254s TMT10 239 (R) TATEEWGTEDWNEDLsETK (I) T(0.0)AT(0.0)EEWGT(0.0)EDWNEDLS(0.99)ET(0.0)K K:TMT10,s:Phosphorylated S UBAP2L 116866.1 2 4 189.1 467.5 HUMAN 1 -13.5915 -12.6301 EDYDIHNSRKKPRID-p J3QR07;S545-p EDYDIHNSRKKPRID 0.580437444061189 0.052041877616503 -0.113666666666667 -0.476333333333333 4.34477192981547 17.1319098241818 -0.113666666666667 -0.476333333333333 0.367724703971022 0.0193557060326558 -0.982485605496808 -3.28613255722801 J3QR07 YTHDC1 J3QR07.S545.p_YTHDC1 J3QR07_S545s _1_1_545_545 J3QR07 J3QR07|Q96MU7|Q96MU7-2 YTH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3891.3891.4 12.34 12.34 12.34 2 1 1 0 467.4759 1786.9146 S545s TMT10 535 (R) RRPEDYDIHNsR (K) RRPEDY(0.0)DIHNS(0.99)R s:Phosphorylated S YTHDC1 85871.1 1 16 702.1 239.92 HUMAN 1 -4.3448 -17.1319 EDYRKRKSLEDVTAE-p Q9P0K7;S667-p EDYRKRKSLEDVTAE 0.1675025767406 0.118221029117895 -0.422 0.172333333333333 15.5055901086958 12.2271469941482 -0.422 0.172333333333333 0.0281475752679541 0.0598804838068128 -2.97382383969791 2.37148039298709 Q9P0K7 RAI14 Q9P0K7.S667.p_RAI14 Q9P0K7_S667s _1_1_667_667 Q9P0K7 Q9P0K7-2|Q9P0K7-3|Q9P0K7-4 Ankycorbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20870.20870.3 18.88 17.96 3.026 3 1 1 0 648.3353 1863.0264 S667s TMT10 667 (K) sLEDVTAEYIHK (A) S(0.99)LEDVT(0.0)AEY(0.0)IHK K:TMT10,s:Phosphorylated S RAI14 110666.9 6 18 498.1 292.24 HUMAN 1 -15.5056 12.2271 EEAEGPYSDNEMLTH-p Q6NUK4;S210-p EEAEGPYSDNEMLTH 0.86718333213857 0.63836543994224 -0.024 -0.0653333333333333 1.20620850351671 2.65483002855746 -0.0241959734901487 -0.0653333333333333 0.757493917052926 0.542646488670365 -0.324832761582486 -0.649302681920417 Q6NUK4 REEP3 Q6NUK4.S210.p_REEP3 Q6NUK4_S210s _1_1_210_210 Q6NUK4 Q6NUK4 Receptor expression-enhancing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18449.18449.5 20.07 20.07 3.335 8 1 1 0 1084.5431 5338.7286 S210s TMT10 180 (K) SKPAPSESAGYGIPLKDGDEKTDEEAEGPYsDNEMLTHK (G) S(0.0)KPAPS(0.0)ES(0.0)AGY(0.0)GIPLKDGDEKT(0.0)DEEAEGPY(0.0)S(0.99)DNEMLT(0.0)HK K:TMT10,s:Phosphorylated S REEP3 29263.4 3 2 1967.1 104.95 HUMAN 1 -1.2062 -2.6548 EEAELEDSDDEEKPV-p Q9UBB9;S98-p EEAELEDSDDEEKPV 0.811880126916971 0.060000849130988 0.0383333333333333 0.251 1.74019094152264 16.2783639635955 0.0383333333333333 0.251 0.669855157977268 0.0235593662470711 0.450464496384694 3.11957121077259 Q9UBB9 TFIP11 Q9UBB9.S98.p_TFIP11 Q9UBB9_S98s _1_1_98_98 Q9UBB9 Q9UBB9 Tuftelin-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16773.16773.4 20.86 20.86 99 1 1 1 0 947.7206 3707.8946 S98s TMT10 88 (K) GAAEEAELEDsDDEEKPVKQDDFPK (D) GAAEEAELEDS(1.0)DDEEKPVKQDDFPK K:TMT10,s:Phosphorylated S TFIP11 97217.4 5 3 1343.1 151.47 HUMAN 1 1.7402 16.2784 EEAELVLTEKSSGTF-p Q5JTH9;T88-p EEAELVLTEKSSGTF 0.208094276358716 0.109815631312109 -0.229 0.171 13.1472968937067 12.670133738226 -0.229 0.171 0.0484473816672359 0.0540737671016217 -2.53764322599333 2.45048931296672 Q5JTH9 RRP12 Q5JTH9.T88.p_RRP12 Q5JTH9_T88t _1_1_88_88 Q5JTH9 Q5JTH9|Q5JTH9-3|Q5JTH9-2 RRP12-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27483.27483.3 18.94 15.6 8.648 3 1 1 0 890.7669 2590.321 T88t TMT10 72 (K) SEAPETPMEEEAELVLtEK (S) S(0.0)EAPET(0.0)PMEEEAELVLT(0.99)EK K:TMT10,t:Phosphorylated T RRP12 145125.9 2 3 1122.1 175.08 HUMAN 1 -13.1473 12.6701 EEAFEDNSEEYIRRD-p P55060;S366-p EEAFEDNSEEYIRRD 0.34218498210401 0.521300932202418 0.153333333333333 0.0873333333333333 8.65145161381676 3.80210271344736 0.153333333333333 0.0873333333333333 0.136412710575986 0.416667597647827 1.74802808830831 0.878963639915647 P55060 CSE1L P55060.S366.p_CSE1L P55060_S366s _1_1_366_366 P55060 P55060|P55060-3 Exportin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12650.12650.3 18.7 18.7 8.198 2 1 1 0 785.0123 2273.052 S366s TMT10 356 (R) AADEEAFEDNsEEYIRR (D) AADEEAFEDNS(0.99)EEY(0.0)IRR s:Phosphorylated S CSE1L 111213.3 3 1 3744.1 44.06 HUMAN 1 8.6515 3.8021 EEAGGAGTPVITEIF-p Q9UIS9-12;T570-p EEAGGAGTPVITEIF 0.863245250945555 0.0373242977169981 -0.0343333333333333 0.270666666666667 1.24550992680295 19.1888233124073 -0.0343333333333334 0.270666666666667 0.750669909048777 0.0120536247985312 -0.334376733264246 3.70369743297074 Q9UIS9 MBD1 Q9UIS9.12.T570.p_MBD1 Q9UIS9-12_T570t _1_1_570_570 Q9UIS9-12 Q9UIS9-12|Q9UIS9-9|Q9UIS9-4 Isoform 12 of Methyl-CpG-binding domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36078.36078.3 24.06 24.06 6.405 4 1 1 0 927.7986 2701.4246 T570t TMT10 559 (K) LAPEEEAGGAGtPVITEIFSLGGTR (F) LAPEEEAGGAGT(0.99)PVIT(0.0)EIFS(0.0)LGGT(0.0)R t:Phosphorylated T MBD1 74521.1 1 10 1033.1 185.84 HUMAN 1 -1.2455 19.1888 EEAGGGISEEEAAQY-p Q9UBE0;S12-p EEAGGGISEEEAAQY 0.732651492896551 0.666982471587475 -0.0686666666666667 -0.0633333333333333 2.5579834181087 2.40718162448767 -0.0686666666666667 -0.0633333333333334 0.554883304965962 0.574489158842557 -0.62910933421137 -0.597124815850846 Q9UBE0 SAE1 Q9UBE0.S12.p_SAE1 Q9UBE0_S12s _1_1_12_12 Q9UBE0 Q9UBE0|Q9UBE0-3|B3KNJ4|Q9UBE0-2|M0QZS6|M0R375 SUMO-activating enzyme subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17315.17315.3 23.99 23.99 15.547 2 1 1 0 883.7241 2569.1925 S12s Acetyl 1 (-) MVEKEEAGGGIsEEEAAQYDR (Q) MVEKEEAGGGIS(0.99)EEEAAQY(0.0)DR K:TMT10,s:Phosphorylated S SAE1 38905.6 4 1 2982.1 64.1 HUMAN 1 -2.558 -2.4072 EEAGPKESSEEGKEG-p Q3YEC7-2;S641-p EEAGPKESSEEGKEG 0.217590840006882 0.0328579444456755 -0.389666666666667 0.335666666666667 12.7590215039114 20.0101048109804 -0.389666666666667 0.335666666666667 0.052978279424481 0.00997675985998786 -2.46773320931239 3.8774886389349 Q3YEC7 RABL6 Q3YEC7.2.S641.p_RABL6 Q3YEC7-2_S641s _1_1_641_641 Q3YEC7-2 Q3YEC7-2 Isoform 2 of Rab-like protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24419.24624.4 22.03 20.87 1.101 3 1 1 0 912.2328 3565.9407 S641s TMT10 622 (R) LKNDSDLFGLGLEEAGPKEsSEEGK (E) LKNDS(0.0)DLFGLGLEEAGPKES(0.99)S(0.0)EEGK K:TMT10,s:Phosphorylated S RABL6 79919.7 7 7 429.1 317.58 HUMAN 1 -12.759 20.0101 EEAMSELTMPSSVLK-p Q9ULT0-4;T717-p EEAMSELTMPSSVLK 0.56732930889055 0.132765511185545 0.0756666666666667 0.194333333333333 4.53355788206314 11.5580028751117 0.0756666666666667 0.194333333333333 0.352082315543725 0.0698553563576863 1.01784137749999 2.25309705396391 Q9ULT0 TTC7A Q9ULT0.4.T717.p_TTC7A Q9ULT0-4_S714sT717t_2_2_714_717 Q9ULT0-4 Q9ULT0-4|G5E9G4 Isoform 3 of Tetratricopeptide repeat protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32596.32596.3 12.73 10.3 5.887 4 2 2 0 795.052 2223.2017 S714s T717t TMT10 709 (R) LEEAMsELtMPSSVLK (Q) LEEAMS(0.99)ELT(0.99)MPS(0.0)S(0.0)VLK K:TMT10,s:Phosphorylated S,t:Phosphorylated T TTC7A 99850 4 6 1883.1 109.27 HUMAN 1 4.5336 11.558 EEANQNLSFGATERW-p Q9H9A6;S71-p EEANQNLSFGATERW 0.41147791714667 0.507194316413548 0.121666666666667 -0.115 7.11371000054649 3.95051239487129 0.121666666666667 -0.115 0.194369894950441 0.402669523251956 1.48090323754935 -0.907505807865515 Q9H9A6 LRRC40 Q9H9A6.S71.p_LRRC40 Q9H9A6_S71s_1_1_71_71 Q9H9A6 Q9H9A6 Leucine-rich repeat-containing protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24835.24835.3 12.87 10.12 0.672 2 1 1 0 843.0757 2446.2411 N67n S71s TMT10 58 (R) INVDIPEEAnQNLsFGATER (W) IN(0.0)VDIPEEAN(0.50)QN(0.50)LS(0.99)FGAT(0.0)ER n:Deamidated,s:Phosphorylated S LRRC40 68762.2 2 1 3734.1 44.29 HUMAN 1 7.1137 -3.9505 EEAPPSRSDPDGGDS-p Q8N1G0;S1184-p EEAPPSRSDPDGGDS 0.934979371920407 0.365866820257343 0.0163333333333333 0.0873333333333333 0.57226694289185 5.78940014507714 0.0163333333333333 0.0873333333333334 0.876543161175382 0.263669554554764 0.16285311362907 1.24666772475989 Q8N1G0 ZNF687 Q8N1G0.S1184.p_ZNF687 Q8N1G0_S1184sS1191s_2_2_1184_1191 Q8N1G0 Q8N1G0 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22759.22759.4 20.82 20.82 1.124 6 2 2 0 1046.4911 4022.9653 S1184s S1191s TMT10 1167 (K) ASALGLGDGEEEAPPSRsDPDGGDsPLPASGGPLTCK (V) AS(0.0)ALGLGDGEEEAPPS(0.0)RS(0.99)DPDGGDS(0.99)PLPAS(0.0)GGPLT(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF687 131979.7 2 29 156.1 501.88 HUMAN 1 0.5723 5.7894 EEAQKTESVDNEGE_-p Q15651;S93-p EEAQKTESVDNEGE_ 0.248798577375663 0.00622995104607711 0.197333333333333 0.528333333333333 11.5322693092161 31.7801109804533 0.197333333333333 0.528333333333333 0.0702705041046404 0.000663726109199609 2.24963614843156 6.98061127690702 Q15651 HMGN3 Q15651.S93.p_HMGN3 Q15651_S93s _1_1_93_93 Q15651 Q15651 High mobility group nucleosome-binding domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10207.10207.4 19.15 19.15 3.252 5 1 1 0 901.6744 3523.7127 S93s TMT10 73 (K) EGTAPSENGETKAEEAQKTEsVDNEGE (-) EGT(0.0)APS(0.0)ENGET(0.0)KAEEAQKT(0.0)ES(0.99)VDNEGE K:TMT10,s:Phosphorylated S HMGN3 10665.7 9 6 1583.1 129.56 HUMAN 1 11.5323 31.7801 EEAQRGASPPISAIE-p Q12774;S11-p EEAQRGASPPISAIE 0.989051104038883 0.68268093400528 -0.00266666666666667 0.052 0.0973486117875781 2.26829030173346 -0.00266666666666668 0.052 0.977834011022679 0.593158788970087 -0.0290920453491264 0.567360657841667 Q12774 ARHGEF5 Q12774.S11.p_ARHGEF5 Q12774_S11s _1_1_11_11 Q12774 Q12774 Rho guanine nucleotide exchange factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.34760.34968.3 21.23 17.29 2.096 3 1 1 0 764.7031 2212.1318 S11s Hydrogen 9 (R) GAsPPISAIEEFSIIPEAPMR (S) GAS(0.99)PPIS(0.0)AIEEFS(0.0)IIPEAPMR s:Phosphorylated S ARHGEF5 177994.4 9 7 487.1 295.28 HUMAN 1 -0.0973 2.2683 EEAQRRDSALQQLRT-p Q6P2H3;S623-p EEAQRRDSALQQLRT 0.88602112979402 0.1792363286676 -0.0236666666666667 -0.150666666666667 1.03152065165649 9.81709300169236 -0.0236666666666667 -0.150666666666667 0.788583952134864 0.10430153496854 -0.28176646898258 -1.94917805039588 Q6P2H3 CEP85 Q6P2H3.S623.p_CEP85 Q6P2H3_S623s _1_1_623_623 Q6P2H3 Q6P2H3 Centrosomal protein of 85 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7931.7931.3 7.43 7.43 99 1 1 1 0 465.9155 1315.7644 S623s TMT10 621 (R) RDsALQQLR (T) RDS(1.0)ALQQLR s:Phosphorylated S CEP85 86322.3 2 5 1644.1 124.14 HUMAN 1 -1.0315 -9.8171 EEAREAGSPAQEFKY-p Q5JSZ5;S613-p EEAREAGSPAQEFKY 0.982673656696447 0.0719209774521856 -0.00533333333333334 -0.212 0.151299763185312 15.192485119646 -0.00533333333333334 -0.212 0.965761801061318 0.0302518186333081 -0.0449467903922584 -2.91269983413961 Q5JSZ5 PRRC2B Q5JSZ5.S613.p_PRRC2B Q5JSZ5_S613s _1_1_613_613 Q5JSZ5 Q5JSZ5|Q5JSZ5-5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12792.12792.2 13.1 6.69 99 1 1 1 0 801.4015 1521.8313 S613s TMT10 610 (R) EAGsPAQEFK (Y) EAGS(1.0)PAQEFK K:TMT10,s:Phosphorylated S PRRC2B 244103.4 7 62 36.2 882.05 HUMAN 1 -0.1513 -15.1925 EEAVKEKSPSLGKKD-p O76021;S443-p EEAVKEKSPSLGKKD 0.175686462587512 0.00159168462790637 -0.353 -0.887666666666667 15.016751227458 44.9063838245628 -0.353 -0.887666666666667 0.0315010389185082 3.23118346351176e-05 -2.88159346969838 -12.5747044188279 O76021 RSL1D1 O76021.S443.p_RSL1D1 O76021_S443s _1_1_443_443 O76021 O76021|O76021-2 Ribosomal L1 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9317.9317.3 10.38 6.01 1.172 2 1 1 0 538.3144 1532.9615 S443s TMT10 441 (K) EKsPSLGK (K) EKS(0.99)PS(0.0)LGK K:TMT10,s:Phosphorylated S RSL1D1 55199.7 8 10 643.1 254.92 HUMAN 1 -15.0168 -44.9064 EEAVPEASPVTQAGA-p O43491;S798-p EEAVPEASPVTQAGA 0.469368395888293 0.008162639188537 0.121666666666667 -0.451333333333333 6.06465180630313 29.7363835313395 0.121666666666667 -0.451333333333333 0.247476986696928 0.00106258002337774 1.29607259309711 -6.3423799707058 O43491 EPB41L2 O43491.S798.p_EPB41L2 O43491_S798s _1_1_798_798 O43491 O43491|E9PHY5|Q6R5J7 Band 4.1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.33831.33831.5 25.57 25.57 1.353 5 1 1 0 1006.1413 4946.7293 S798s TMT10 787 (K) VVEREEAVPEAsPVTQAGASVITVETVIQENVGAQKIPGEK (S) VVEREEAVPEAS(0.99)PVT(0.0)QAGAS(0.0)VIT(0.0)VET(0.0)VIQENVGAQKIPGEK K:TMT10,s:Phosphorylated S EPB41L2 113099.5 5 14 469.1 302.69 HUMAN 1 6.0647 -29.7364 EEAYHSRSKSPLPPE-p Q1KMD3;S226-p EEAYHSRSKSPLPPE 0.225268639675981 0.0320849526179946 0.186666666666667 0.368333333333333 12.4354320477715 20.1571191089451 0.186666666666667 0.368333333333333 0.0570764292188354 0.00964468591403222 2.40981486150747 3.90905664394117 Q1KMD3 HNRNPUL2 Q1KMD3.S226.p_HNRNPUL2 Q1KMD3_S226sS228s_2_2_226_228 Q1KMD3 Q1KMD3|H3BQZ7 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28740.28740.5 18.66 16.51 5.425 8 2 2 0 1039.9146 5035.6082 S226s S228s TMT10 226 (R) sKsPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK (D) S(0.99)KS(0.99)PLPPEEEAKDEEEDQT(0.0)LVNLDT(0.0)Y(0.0)T(0.0)S(0.0)DLHFQVS(0.0)K K:TMT10,s:Phosphorylated S HNRNPUL2 85673.7 1 13 294.1 379.87 HUMAN 1 12.4354 20.1571 EECAHRGSPLPKKRK-p Q9H147;S161-p EECAHRGSPLPKKRK 0.476455753457484 0.0405973069586793 0.103333333333333 0.273 5.92750332878684 18.6548713711521 0.103333333333333 0.273 0.255416922095238 0.0136305337637054 1.27163812740557 3.59295533818239 Q9H147 DNTTIP1 Q9H147.S161.p_DNTTIP1 Q9H147_S161s _1_1_161_161 Q9H147 Q9H147 Deoxynucleotidyltransferase terminal-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5971.5971.3 15.23 15.23 99 1 1 1 0 749.7044 2167.133 S161s TMT10 151 (R) QAEEECAHRGsPLPK (K) QAEEECAHRGS(1.0)PLPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DNTTIP1 37298 12 1 4021.1 38.97 HUMAN 1 5.9275 18.6549 EECFHDCSASFEEEP-p Q99614;S67-p EECFHDCSASFEEEP 0.343131300486943 0.00288359380714968 -0.311 -1.06866666666667 8.62877427670334 38.4089714559394 -0.311 -1.06866666666667 0.137126872914306 0.000144245692962417 -1.74410223236867 -9.43826448398661 Q99614 TTC1 Q99614.S67.p_TTC1 Q99614_S67sS69s_2_2_67_69 Q99614 Q99614 Tetratricopeptide repeat protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17739.17739.5 21.2 21.2 99 2 2 2 0 1062.8688 5150.3835 S67s S69s TMT10 45 (K) LLRDDEAHLQEDQGEEECFHDCsAsFEEEPGADKVENK (S) LLRDDEAHLQEDQGEEECFHDCS(1.0)AS(1.0)FEEEPGADKVENK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TTC1 33982 1 3 3145.1 59.36 HUMAN 1 -8.6288 -38.409 EECLKQPSLEQKEGR-p Q9UKV3;S551-p EECLKQPSLEQKEGR 0.689963583295612 0.0163828507912963 0.061 0.372666666666667 3.02163927866004 24.6607528417314 0.061 0.372666666666667 0.498696215123368 0.00341920166125727 0.724804062729255 4.9522938247731 Q9UKV3 ACIN1 Q9UKV3.S551.p_ACIN1 Q9UKV3_S551s _1_1_551_551 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16252.16252.3 15.28 9.38 12.667 2 1 1 0 843.1206 2447.3783 S551s TMT10 541 (K) GITEECLKQPsLEQK (E) GIT(0.0)EECLKQPS(0.99)LEQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ACIN1 152258.2 3 16 32.2 899.18 HUMAN 1 3.0216 24.6608 EECQQDVSLLRKQAE-p Q9UHY7;S57-p EECQQDVSLLRKQAE 0.839200328421563 0.40641450458175 0.044 0.0963333333333334 1.47357974283354 5.206062633522 0.044 0.0963333333333334 0.712265691528571 0.301573889065062 0.388786882440822 1.14145073481068 Q9UHY7 ENOPH1 Q9UHY7.S57.p_ENOPH1 Q9UHY7_S57s _1_1_57_57 Q9UHY7 Q9UHY7 Enolase-phosphatase E1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19883.19883.5 19.76 19.76 19.757 3 1 1 0 652.5169 3178.5879 S57s TMT10 41 (K) EYLQTHWEEEECQQDVsLLRK (Q) EY(0.0)LQT(0.0)HWEEEECQQDVS(0.99)LLRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ENOPH1 29103.3 2 1 3999.1 39.38 HUMAN 1 1.4736 5.2061 EEDDILASDDPSSIE-p Q96RS0;S154-p EEDDILASDDPSSIE 0.757201638201782 0.321829107177403 -0.045 0.110333333333333 2.31202365225438 6.50880842033008 -0.045 0.110333333333333 0.587215667908065 0.223418513515458 -0.576844427626959 1.37437461191247 Q96RS0 TGS1 Q96RS0.S154.p_TGS1 Q96RS0_S154s _1_1_154_154 Q96RS0 Q96RS0 Trimethylguanosine synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21615.21615.3 23.69 23.69 6.491 6 1 1 0 1009.7678 2947.3166 S154s TMT10 145 (K) EYEEDDILAsDDPSSIEQYENTR (T) EY(0.0)EEDDILAS(0.99)DDPS(0.0)S(0.0)IEQY(0.0)ENT(0.0)R s:Phosphorylated S TGS1 97473.9 3 4 1387.1 147.41 HUMAN 1 -2.312 6.5088 EEDEDARTPDRATQG-p Q8NC56;T147-p EEDEDARTPDRATQG 0.139286671509888 0.142252077444902 0.260333333333333 0.238 17.5296993832752 11.1617933107117 0.260333333333333 0.238 0.017661600692761 0.0765280538153998 3.36770302280209 2.18347755883315 Q8NC56 LEMD2 Q8NC56.T147.p_LEMD2 Q8NC56_T147t _1_1_147_147 Q8NC56 Q8NC56 LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4422.4422.3 19.87 15.8 2.063 4 1 1 0 856.0444 2486.1502 T147t Hydrogen 137 (R) GSSEEDEDARtPDRATQGPGLAAR (R) GS(0.0)S(0.0)EEDEDART(0.99)PDRAT(0.0)QGPGLAAR t:Phosphorylated T LEMD2 57373.5 3 5 664.1 250.64 HUMAN 1 17.5297 11.1618 EEDEDEASEAEGARA-p P04920;S132-p EEDEDEASEAEGARA 0.301222315977063 0.0345710246262005 0.221333333333333 0.344666666666667 9.78503305850891 19.6840466931419 0.221333333333333 0.344666666666667 0.105074345657279 0.0107546264608124 1.9443864062219 3.80797744808157 P04920 SLC4A2 P04920.S132.p_SLC4A2 P04920_S132s _1_1_132_132 P04920 P04920|P04920-3|P04920-2 Anion exchange protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8375.8375.5 26.17 26.17 17.157 5 1 1 0 717.1211 3501.6051 S132s TMT10 108 (R) RRPGASPTGETPTIEEGEEDEDEAsEAEGAR (A) RRPGAS(0.0)PT(0.0)GET(0.0)PT(0.0)IEEGEEDEDEAS(0.99)EAEGAR s:Phosphorylated S SLC4A2 137577.4 2 2 1448.1 140.9 HUMAN 1 9.785 19.684 EEDEDEVSMKGRPPP-p Q5T1M5;S1195-p EEDEDEVSMKGRPPP 0.377007280567508 0.00216468966908069 -0.254 0.807 7.82878786131953 41.3900501111801 -0.254 0.807 0.164862246649631 7.2609757929129e-05 -1.60544517528366 10.7746047632298 Q5T1M5 FKBP15 Q5T1M5.S1195.p_FKBP15 Q5T1M5_S1195s _1_1_1195_1195 Q5T1M5 Q5T1M5|Q5T1M5-2 FK506-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11881.11881.2 13.24 13.24 99 1 1 1 0 1087.4868 2093.9949 S1195s TMT10 1184 (K) AQPEEEDEDEVsMK (G) AQPEEEDEDEVS(1.0)MK K:TMT10,s:Phosphorylated S FKBP15 134140.9 2 21 173.1 487.64 HUMAN 1 -7.8288 41.3901 EEDEDNTSEAENGFS-p Q03701;S34-p EEDEDNTSEAENGFS 0.780823402104169 0.107288545373446 0.055 0.171666666666667 2.0652212417759 12.8047725223158 0.055 0.171666666666667 0.62155258331611 0.0524231058816276 0.523197790272628 2.47461336060636 Q03701 CEBPZ Q03701.S34.p_CEBPZ Q03701_T33tS34s_2_2_33_34 Q03701 Q03701 CCAAT/enhancer-binding protein zeta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28380.28380.4 23.79 20.53 6.705 3 2 2 0 1095.7191 4217.9221 N32n T33t S34s N38n TMT10 14 (K) RPWRPEEAVEDPDEEDEDntsEAEnGFSLEEVLR (L) RPWRPEEAVEDPDEEDEDN(1.0)T(0.99)S(0.99)EAEN(1.0)GFS(0.0)LEEVLR n:Deamidated,t:Phosphorylated T,s:Phosphorylated S CEBPZ 121599.4 2 6 1132.1 173.97 HUMAN 1 2.0652 12.8048 EEDEEADSDTDDIDH-p Q9HCN4-4;S326-p EEDEEADSDTDDIDH 0.856803399219307 0.992267747460299 0.0273333333333333 -0.00133333333333333 1.30651972758495 0.049463956146948 0.0273333333333333 -0.00133333333333332 0.740198204414733 0.988675117969723 0.349091771518107 -0.0148603002542416 Q9HCN4 GPN1 Q9HCN4.4.S326.p_GPN1 Q9HCN4-4_S326s _1_1_326_326 Q9HCN4-4 Q9HCN4|Q9HCN4-4|Q9HCN4-2|Q9HCN4-3 Isoform 4 of GPN-loop GTPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.9107.9317.3 19.34 19.34 1.713 3 1 1 0 862.6795 2506.0539 S326s TMT10 315 (R) GTLDEEDEEADsDTDDIDHR (V) GT(0.0)LDEEDEEADS(0.99)DT(0.0)DDIDHR s:Phosphorylated S GPN1 41070.7 7 4 2311.1 88.47 HUMAN 1 1.3065 -0.0495 EEDEEPESPPEKKTS-p Q9H1E3;S214-p EEDEEPESPPEKKTS 0.820292136365904 0.0134291665885687 0.035 0.367 1.65726232115182 26.0347198446448 0.035 0.367 0.682768958211018 0.00249188511297906 0.4314875704024 5.30372442898349 Q9H1E3 NUCKS1 Q9H1E3.S214.p_NUCKS1 Q9H1E3_S214s _1_1_214_214 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9135.9338.3 19.98 13.59 7.096 3 1 1 0 1017.1965 2969.6125 S214s TMT10 202 (K) TPSPKEEDEEPEsPPEKK (T) T(0.0)PS(0.0)PKEEDEEPES(0.99)PPEKK K:TMT10,s:Phosphorylated S NUCKS1 27295.9 52 16 48.1 767.83 HUMAN 1 1.6573 26.0347 EEDEGSDSGDSEDDV-p Q7KZ85;S75-p EEDEGSDSGDSEDDV 0.471941186312508 0.0099286891041713 -0.232166666666667 0.490333333333333 6.01776559443847 28.1611182296909 -0.232166666666667 0.490333333333333 0.250163209759487 0.00152717278825657 -1.28772777812516 5.88299202471403 Q7KZ85 SUPT6H Q7KZ85.S75.p_SUPT6H Q7KZ85_S73sS75s_2_2_73_75 Q7KZ85 Q7KZ85|Q7KZ85-3 Transcription elongation factor SPT6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16503.16503.3 24.52 24.52 1.169 3 2 2 0 1282.8192 3686.4898 S73s S75s TMT10 56 (K) GFINDDDDEDEGEEDEGsDsGDSEDDVGHK (K) GFINDDDDEDEGEEDEGS(0.99)DS(0.99)GDS(0.0)EDDVGHK K:TMT10,s:Phosphorylated S SUPT6H 200324.3 2 16 279.1 388.92 HUMAN 2 -6.0178 28.1611 EEDERGPTPPVRGAA-p Q9Y6N7-2;T1244-p EEDERGPTPPVRGAA 0.516958631742372 0.0367781126300788 0.0903333333333333 0.259 5.29094600650507 19.2961542576854 0.0903333333333334 0.259 0.295736820455814 0.0117593840499769 1.15711822527053 3.72616799285427 Q9Y6N7 ROBO1 Q9Y6N7.2.T1244.p_ROBO1 Q9Y6N7-2_T1244t _1_1_1244_1244 Q9Y6N7-2 Q9Y6N7-2|Q9Y6N7-3|Q9Y6N7-4|Q9Y6N7-5|A0A087WTM1|Q9Y6N7-6|A0A0A0MSX4|A0A087WZ85 Isoform 2 of Roundabout homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18456.18456.3 16.62 11.52 10.312 2 1 1 0 990.4539 2889.3774 T1244t TMT10 1227 (R) MYLQQDELEEEEDERGPtPPVR (G) MY(0.0)LQQDELEEEEDERGPT(0.99)PPVR t:Phosphorylated T ROBO1 182465.9 2 6 832.1 215.62 HUMAN 1 5.2909 19.2962 EEDEYETSGEGQDIW-p Q9NUW8;S148-p EEDEYETSGEGQDIW 0.622841097517516 0.0793963991701184 0.0716666666666667 0.215666666666667 3.82088683671947 14.5978695518711 0.0716666666666667 0.215666666666667 0.41486931696387 0.0346906985262422 0.882733324922362 2.80159764707162 Q9NUW8 TDP1 Q9NUW8.S148.p_TDP1 Q9NUW8_T147tS148s_2_2_147_148 Q9NUW8 Q9NUW8|E7EPD8|G3V2F4|Q9BRS7|G3V5H9|G3V4W8 Tyrosyl-DNA phosphodiesterase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31649.31860.3 13.98 13.98 6.819 3 2 2 0 1202.8718 3446.6764 T147t S148s TMT10 138 (R) LKEEEDEYEtsGEGQDIWDMLDK (G) LKEEEDEY(0.0)ET(0.99)S(0.99)GEGQDIWDMLDK K:TMT10,t:Phosphorylated T,s:Phosphorylated S TDP1 68818.5 2 10 1900.1 108.34 HUMAN 1 3.8209 14.5979 EEDFRRPSEEDFRRP-p Q8IXT5;S591-p EEDFRRPSEEDFRRP 0.945238540418175 0.403078841221398 -0.016 0.254666666666667 0.480571556349116 5.24903620582301 -0.016 0.254666666666667 0.89524693818484 0.298604521395311 -0.137977985007497 1.14926349034156 Q8IXT5 RBM12B Q8IXT5.S591.p_RBM12B Q8IXT5_S591s _1_1_591_591 Q8IXT5 Q8IXT5|B9ZVT1 RNA-binding protein 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15903.15903.5 9.99 6.39 99 1 1 1 0 628.0871 3056.4448 S591s TMT10 584 (R) EEDFRRPsEEDFRRPWEEDFR (R) EEDFRRPS(1.0)EEDFRRPWEEDFR s:Phosphorylated S RBM12B 118442.9 1 8 384.1 333.8 HUMAN 1 -0.4806 5.249 EEDGEEKSPSKKKKK-p Q12906-7;S382-p EEDGEEKSPSKKKKK 0.419766349161955 0.536289359676561 -0.311 0.065 6.95689402547199 3.64152376452523 -0.311 0.0650000000000001 0.201516493437145 0.432362105959869 -1.45346561082412 0.847820375972306 Q12906 ILF3 Q12906.7.S382.p_ILF3 Q12906-7_S382s _1_1_382_382 Q12906-7 Q12906-7|Q12906-3|Q12906-6|Q12906-2|Q12906-4|Q12906-5 Isoform 7 of Interleukin enhancer-binding factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6449.6657.3 13.44 13.44 1.413 2 1 1 0 796.0694 2306.2265 S382s TMT10 372 (K) RPMEEDGEEKsPSK (K) RPMEEDGEEKS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S ILF3 96205.6 39 9 130.1 537.24 HUMAN 1 -6.9569 3.6415 EEDGGTVSQEEEDRK-p P27824-2;S599-p EEDGGTVSQEEEDRK 0.596697812929265 0.0329236769863507 0.089 0.316 4.13975887465034 19.9942882655381 0.089 0.316 0.385499760466868 0.0100131604068522 0.943752117175445 3.87410084204048 P27824 CANX P27824.2.S599.p_CANX P27824-2_S599s _1_1_599_599 P27824-2 P27824-2|P27824-3 Isoform 2 of Calnexin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6829.6829.5 19.82 19.82 1.23 3 1 1 0 692.5553 3378.7795 S599s TMT10 587 (K) QKSDAEEDGGTVsQEEEDRKPK (A) QKS(0.0)DAEEDGGT(0.0)VS(0.99)QEEEDRKPK K:TMT10,s:Phosphorylated S CANX 72015 21 3 806.1 222 HUMAN 1 4.1398 19.9943 EEDGPVLTDEQKSRI-p Q66PJ3;T343-p EEDGPVLTDEQKSRI 0.52603231783579 0.0347677052789133 0.142333333333333 0.432333333333333 5.16107055140111 19.6452368336868 0.142333333333333 0.432333333333333 0.304714376522638 0.0108511637339882 1.1334948593751 3.79974928494272 Q66PJ3 ARL6IP4 Q66PJ3.T343.p_ARL6IP4 Q66PJ3_T343t _1_1_343_343 Q66PJ3 Q66PJ3 ADP-ribosylation factor-like protein 6-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12312.12312.3 15.51 14.01 11.644 2 1 1 0 748.0227 2162.0865 T343t TMT10 332 (R) SAGEEEDGPVLtDEQK (S) S(0.0)AGEEEDGPVLT(0.99)DEQK K:TMT10,t:Phosphorylated T ARL6IP4 45314 1 4 1859.1 110.77 HUMAN 1 5.1611 19.6452 EEDGQEGSIHNLPLV-p O75717;S407-p EEDGQEGSIHNLPLV 0.340727355898959 0.0314577760293901 0.135333333333333 -0.284 8.69381163780365 20.2924864828838 0.135333333333333 -0.284 0.135088642102417 0.00934870276024283 1.75536111548327 -3.93825001028857 O75717 WDHD1 O75717.S407.p_WDHD1 O75717_S407s _1_1_407_407 O75717 O75717|O75717-2 WD repeat and HMG-box DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23737.23737.5 22.71 15.13 7.529 8 1 1 0 970.8785 4770.4085 S407s TMT10 391 (K) TGSSLLKEEEEDGQEGsIHNLPLVTSQRPFYDGPMPTPR (Q) T(0.0)GS(0.0)S(0.0)LLKEEEEDGQEGS(0.99)IHNLPLVT(0.0)S(0.0)QRPFY(0.0)DGPMPT(0.0)PR K:TMT10,s:Phosphorylated S WDHD1 127448.5 17 7 554.1 273.24 HUMAN 1 8.6938 -20.2925 EEDGSRDSPLFDFIE-p Q9Y678;S249-p EEDGSRDSPLFDFIE 0.644663689830828 0.0630817908838208 0.062 0.219666666666667 3.56747981416948 15.9774691028228 0.062 0.219666666666667 0.43979675292245 0.0252495178626072 0.833494088506741 3.06170569629545 Q9Y678 COPG1 Q9Y678.S249.p_COPG1 Q9Y678_S249s _1_1_249_249 Q9Y678 Q9Y678 Coatomer subunit gamma-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33262.33262.3 10.84 7.69 10.838 3 1 1 0 984.4455 2871.3668 S249s TMT10 239 (K) QLEEEDGSRDsPLFDFIESCLR (N) QLEEEDGS(0.0)RDS(0.99)PLFDFIES(0.0)CLR C:Carbamidomethylation,s:Phosphorylated S COPG1 99028.8 1 3 1422.1 144.09 HUMAN 1 3.5675 15.9775 EEDGTIITL______-p Q9BYG5;T371-p EEDGTIITL______ 0.0734347857517839 0.138789150227669 -0.370333333333333 -0.399666666666667 24.3426159626058 11.298489818657 -0.370333333333333 -0.399666666666667 0.0036790729878973 0.0741568063495378 -4.87918533560778 -2.20746063108994 Q9BYG5 PARD6B Q9BYG5.T371.p_PARD6B Q9BYG5_T371t _1_1_371_371 Q9BYG5 Q9BYG5 Partitioning defective 6 homolog beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34232.34232.2 13.4 13.4 5.3 2 1 1 0 763.4009 1445.83 T371t TMT10 362 (K) LLEEDGTIItL (-) LLEEDGT(0.0)IIT(0.99)L t:Phosphorylated T PARD6B 41238.5 1 5 2369.1 86.37 HUMAN 1 -24.3426 -11.2985 EEDILNKSLDAKEPP-p Q7Z4H7;S943-p EEDILNKSLDAKEPP 0.0428370985731628 0.0123552213509833 -0.668666666666667 -0.563666666666667 30.4614381680488 26.6348627917462 -0.668666666666667 -0.563666666666667 0.000899199761832468 0.00217026976861667 -6.57375494922052 -5.46270778446498 Q7Z4H7 HAUS6 Q7Z4H7.S943.p_HAUS6 Q7Z4H7_S943s _1_1_943_943 Q7Z4H7 Q7Z4H7|Q7Z4H7-3 HAUS augmin-like complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13192.13192.3 11.87 11.87 2.29 3 1 1 0 656.3469 1887.0588 S943s TMT10 943 (K) sLDAKEPPSDLTR (-) S(0.99)LDAKEPPS(0.0)DLT(0.0)R K:TMT10,s:Phosphorylated S HAUS6 109703.4 3 9 1302.1 156.27 HUMAN 1 -30.4614 -26.6349 EEDKGFKSPPCEDFS-p E9PGC8;S1147-p EEDKGFKSPPCEDFS 0.435638142805531 0.049885048454094 -0.167666666666667 0.298666666666667 6.64405153722889 17.4097779692962 -0.167666666666667 0.298666666666667 0.216568279464784 0.0181560848240163 -1.39855086123219 3.34116198178068 E9PGC8 NotFound E9PGC8.S1147.p_NotFound E9PGC8_S1147s _1_1_1147_1147 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18492.18492.3 12.5 12.5 2.178 4 1 1 0 923.4514 2688.3794 S1147s TMT10 1144 (K) GFKsPPCEDFSVTGESEK (R) GFKS(0.99)PPCEDFS(0.0)VT(0.0)GES(0.0)EK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MAP1A 332906.7 3 16 20.1 1016.98 HUMAN 1 -6.6441 17.4098 EEDLPELSDSGDEAA-p O60678;S25-p EEDLPELSDSGDEAA 0.682597139118178 0.979322604665725 -0.0776666666666667 0.00333333333333334 3.10819346978285 0.129958064664884 -0.0776666666666667 0.00333333333333333 0.488855665835676 0.970519338503679 -0.742303230832175 0.0386937234041966 O60678 PRMT3 O60678.S25.p_PRMT3 O60678_S25sS27s_2_2_25_27 O60678 O60678 Protein arginine N-methyltransferase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22701.23320.4 30.7 30.7 99 2 2 2 0 1043.9426 4012.8096 S25s S27s TMT10 13 (R) GAVENEEDLPELsDsGDEAAWEDEDDADLPHGK (Q) GAVENEEDLPELS(1.0)DS(1.0)GDEAAWEDEDDADLPHGK K:TMT10,s:Phosphorylated S PRMT3 60559.7 13 2 3596.1 47.49 HUMAN 1 -3.1082 0.13 EEDNEIESEEEVQPK-p P52701;S227-p EEDNEIESEEEVQPK 0.528361651166894 0.699098574606328 -0.197666666666667 0.0903333333333333 5.12800303087573 2.13647220991772 -0.197666666666667 0.0903333333333333 0.307043350792005 0.611438496979757 -1.12746441782617 0.538752924044737 P52701 MSH6 P52701.S227.p_MSH6 P52701_S227s _1_1_227_227 P52701 P52701|P52701-3|P52701-2|A0A087WWJ1 DNA mismatch repair protein Msh6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12024.12024.3 13.21 10.55 8.546 2 1 1 0 810.3719 2349.1346 S227s TMT10 219 (K) SEEDNEIEsEEEVQPK (T) S(0.0)EEDNEIES(0.99)EEEVQPK K:TMT10,s:Phosphorylated S MSH6 154608.6 2 9 875.1 209.27 HUMAN 1 -5.128 2.1365 EEDNSDESDAEGEHG-p Q9H1C4;S550-p EEDNSDESDAEGEHG 0.744043857023488 0.70000272694535 -0.046 -0.0396666666666666 2.43768232583217 2.12982593338181 -0.046 -0.0396666666666666 0.570468629745488 0.612374935416297 -0.603687408770615 -0.5373008589151 Q9H1C4 UNC93B1 Q9H1C4.S550.p_UNC93B1 Q9H1C4_S547sS550s_2_2_547_550 Q9H1C4 Q9H1C4 Protein unc-93 homolog B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16057.16263.5 27.92 25.9 6.919 3 2 2 0 899.3776 4332.9239 S547s S550s TMT10 541 (R) YLEEDNsDEsDAEGEHGDGAEEEAPPAGPRPGPEPAGLGR (R) Y(0.0)LEEDNS(0.99)DES(0.99)DAEGEHGDGAEEEAPPAGPRPGPEPAGLGR s:Phosphorylated S UNC93B1 66972.3 8 2 3530.1 48.94 HUMAN 1 -2.4377 -2.1298 EEDNVEQSGEEEAEA-p Q93073;S1048-p EEDNVEQSGEEEAEA 0.67396479002873 0.0475529160710635 -0.074 0.268 3.21244187740484 17.6941373144252 -0.074 0.268 0.477260852060125 0.0170053771608743 -0.763241004940927 3.39790458900642 Q93073 SECISBP2L Q93073.S1048.p_SECISBP2L Q93073_S1048s _1_1_1048_1048 Q93073 Q93073|Q93073-2 Selenocysteine insertion sequence-binding protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24926.24926.4 25.53 23.55 2.848 6 1 1 0 1339.5979 5275.4021 S1048s TMT10 1036 (K) TLNGSEEDNVEQsGEEEAEAPEVLEPGMDSEAWTADQQASPGQQK (S) T(0.0)LNGS(0.0)EEDNVEQS(0.99)GEEEAEAPEVLEPGMDS(0.0)EAWT(0.0)ADQQAS(0.0)PGQQK K:TMT10,s:Phosphorylated S SECISBP2L 122857.8 1 7 2023.1 101.99 HUMAN 1 -3.2124 17.6941 EEDPEQDSGPEDLPL-p P06400;S37-p EEDPEQDSGPEDLPL 0.226745298006208 0.511577352697475 0.271333333333333 -0.0766666666666666 12.3821644339209 3.90427365358877 0.271333333333333 -0.0766666666666666 0.0577808008068417 0.406979594413622 2.40030915618425 -0.8986371031972 P06400 RB1 P06400.S37.p_RB1 P06400_S37s _1_1_37_37 P06400 P06400|Q92728 Retinoblastoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25191.25397.4 30.48 24.43 16.961 3 1 1 0 1020.244 3997.9868 S37s TMT10 9 (K) TAATAAAAAAEPPAPPPPPPPEEDPEQDsGPEDLPLVR (L) T(0.0)AAT(0.0)AAAAAAEPPAPPPPPPPEEDPEQDS(0.99)GPEDLPLVR s:Phosphorylated S RB1 107013.3 6 1 155.1 502.88 HUMAN 1 12.3822 -3.9043 EEDSEGSSDEDEDED-p B5ME19;S182-p EEDSEGSSDEDEDED 0.43276554026149 0.00604775327324358 -0.193 0.839666666666667 6.6994019874204 32.0315914891431 -0.193 0.839666666666667 0.213825650177469 0.000626384281635136 -1.40828557093957 7.06265332774445 B5ME19 EIF3CL B5ME19.S182.p_EIF3CL B5ME19_S181sS182s_2_2_181_182 B5ME19 B5ME19|Q99613|Q99613-2 Eukaryotic translation initiation factor 3 subunit C-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23266.23266.5 25.53 25.53 1.146 6 2 2 0 993.6177 4804.1444 S181s S182s TMT10 161 (K) QNPEQSADEDAEKNEEDSEGssDEDEDEDGVSAATFLK (K) QNPEQS(0.0)ADEDAEKNEEDS(0.0)EGS(0.99)S(0.99)DEDEDEDGVS(0.0)AAT(0.0)FLK K:TMT10,s:Phosphorylated S EIF3CL 106155.7 5 12 451.1 308.49 HUMAN 2 -6.6994 32.0316 EEDSGTDSEYDESGK-p Q96K76;S1017-p EEDSGTDSEYDESGK 0.797289518920796 0.265283068873777 -0.0613333333333334 0.124666666666667 1.89874831501657 7.58931090113407 -0.0613333333333334 0.124666666666667 0.645840340580523 0.174208326934429 -0.486260513086693 1.56335562470249 Q96K76 USP47 Q96K76.S1017.p_USP47 Q96K76_S1013sT1015tS1017s_3_3_1013_1017 Q96K76 Q96K76|Q96K76-4|Q96K76-2 Ubiquitin carboxyl-terminal hydrolase 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14837.15048.4 12.73 12.73 1.431 7 3 3 0 1034.4504 3894.8811 S1013s T1015t S1017s TMT10 998 (K) ANEGKKETWDTAEEDsGtDsEYDESGK (S) ANEGKKET(0.0)WDT(0.0)AEEDS(0.99)GT(0.99)DS(0.99)EY(0.0)DES(0.0)GK K:TMT10,s:Phosphorylated S,t:Phosphorylated T USP47 158677.8 3 14 770.1 227.83 HUMAN 1 -1.8987 7.5893 EEDSQAETKSLSFSS-p O75410;T48-p EEDSQAETKSLSFSS 0.28350205473692 0.0911334780410741 -0.173666666666667 0.725 10.3397304000205 13.7600873931265 -0.173666666666667 0.725 0.0924755578846002 0.0420718162183043 -2.04080002275153 2.64741960768338 O75410 TACC1 O75410.T48.p_TACC1 O75410_S44sT48t_2_2_44_48 O75410 O75410-2|O75410-6 Transforming acidic coiled-coil-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.9226.9226.3 12.19 12.19 99 2 2 2 0 1050.7632 2990.3387 S44s T48t TMT10 24 (R) GGAAGEDEAGGPEGDPEEEDsQAEtK (S) GGAAGEDEAGGPEGDPEEEDS(1.0)QAET(1.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T TACC1 88648.6 1 16 442.1 311.73 HUMAN 1 -10.3397 13.7601 EEDVIPDSPITAFSF-p I6L8A6;S163-p EEDVIPDSPITAFSF 0.880959558381171 0.0281259447324676 0.0323333333333333 0.310666666666667 1.0813305061632 21.0174613193432 0.0323333333333333 0.310666666666667 0.779591238077768 0.00791140956538968 0.294156723147655 4.0967064347925 I6L8A6 NotFound I6L8A6.S163.p_NotFound I6L8A6_S163s _1_1_163_163 I6L8A6 Q99708-2|I6L8A6|Q99708-3 DNA endonuclease RBBP8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28582.28582.4 33.19 33.19 3.82 4 1 1 0 1039.4751 4074.9188 S163s TMT10 142 (K) IENDQQHQAAELECEEDVIPDsPITAFSFSGVNR (L) IENDQQHQAAELECEEDVIPDS(0.99)PIT(0.0)AFS(0.0)FS(0.0)GVNR C:Carbamidomethylation,s:Phosphorylated S RBBP8 103921.2 6 2 258.1 398.22 HUMAN 1 1.0813 21.0175 EEDVKLLSISGKRSA-p P06748;S137-p EEDVKLLSISGKRSA 0.0519571788354811 0.504099052447779 -0.853666666666667 -0.109666666666667 28.0354415459924 3.98575682452416 -0.853666666666667 -0.109666666666667 0.00157201195831916 0.399414951082162 -5.85596732854901 -0.91425158965991 P06748 NPM1 P06748.S137.p_NPM1 P06748_S137s _1_1_137_137 P06748 E9PDN6|Q9C0A0|A0A0A0MR20|F5H107|A0A087WTA1|Q9C0A0-2|P06748|P06748-2|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21722.21722.2 10.58 1.31 1.311 2 1 1 0 628.3761 1175.7764 S137s TMT10 135 (K) LLsISGK (R) LLS(0.99)IS(0.0)GK K:TMT10,s:Phosphorylated S NPM1 32745.6 5 8 78.1 640.75 HUMAN 1 -28.0354 -3.9858 EEDVSIKSPICEKQD-p Q5UIP0;S1616-p EEDVSIKSPICEKQD 0.157641896948893 0.0444539202864225 -0.884666666666667 0.349666666666667 16.0931868089675 18.0990867949391 -0.884666666666667 0.349666666666667 0.0245856287352051 0.0154914232783767 -3.08610362503214 3.47947800618534 Q5UIP0 RIF1 Q5UIP0.S1616.p_RIF1 Q5UIP0_S1616s _1_1_1616_1616 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15147.15147.4 20.84 20.84 3.857 4 1 1 0 640.8354 2480.3521 S1616s TMT10 1606 (K) ATSEEDVSIKsPICEK (Q) AT(0.0)S(0.0)EEDVS(0.0)IKS(0.99)PICEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RIF1 276628.8 3 20 29.1 922.06 HUMAN 1 -16.0932 18.0991 EEEDEALSPAKGQKP-p P18858;S76-p EEEDEALSPAKGQKP 0.536707354766898 0.00956621991515505 -0.0963333333333333 -0.489 5.00019786887278 28.4817951453955 -0.0963333333333334 -0.489 0.316213358694429 0.00141847107901691 -1.10409436498455 -5.97433514642434 P18858 LIG1 P18858.S76.p_LIG1 P18858_S76s _1_1_76_76 P18858 P18858|P18858-3|F5GZ28|P18858-2|M0R0Q7|B4E135 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17977.17977.2 23.03 20.74 11.949 2 1 1 0 1149.5611 2218.1491 S76s TMT10 63 (R) VLGSEGEEEDEALsPAK (G) VLGS(0.0)EGEEEDEALS(0.99)PAK K:TMT10,s:Phosphorylated S LIG1 102361.8 3 5 302.1 376.44 HUMAN 1 -5.0002 -28.4818 EEEDEDASGGDQDQE-p O60216;S545-p EEEDEDASGGDQDQE 0.982673656696447 0.0157592260547454 -0.00333333333333335 0.516333333333333 0.151423928530174 24.9170409128468 -0.00333333333333335 0.516333333333333 0.965734190203268 0.00322326423045111 -0.044983065987588 5.01656219348213 O60216 RAD21 O60216.S545.p_RAD21 O60216_S545s _1_1_545_545 O60216 O60216 Double-strand-break repair protein rad21 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5819.5819.4 25.9 25.9 99 1 1 1 0 927.6507 3627.6145 S545s TMT10 530 (K) EKEKEDDEEEEDEDAsGGDQDQEER (R) EKEKEDDEEEEDEDAS(1.0)GGDQDQEER K:TMT10,s:Phosphorylated S RAD21 71973.5 4 5 1167.1 170.49 HUMAN 1 -0.1514 24.917 EEEDEEESESEAKSV-p P51531;S1528-p EEEDEEESESEAKSV 0.875245855173676 0.0394715177540044 -0.038 0.294666666666667 1.13361184824571 18.830410986908 -0.038 0.294666666666667 0.770262606942173 0.0130905803674371 -0.307065730397978 3.62917265345179 P51531 SMARCA2 P51531.S1528.p_SMARCA2 P51531_S1512sS1516sS1528s_3_3_1512_1528 P51531 P51531|P51531-2|F6VDE0|B1ALF6 Probable global transcription activator SNF2L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15247.15247.4 11.11 11.11 1.673 4 3 3 0 1054.4186 3974.7613 S1512s S1516s S1528s TMT10 1506 (K) IAKEEEsEDEsNEEEEEEDEEEsESEAK (S) IAKEEES(0.99)EDES(0.99)NEEEEEEDEEES(0.99)ES(0.0)EAK K:TMT10,s:Phosphorylated S SMARCA2 181903.8 4 28 392.2 331.85 HUMAN 1 -1.1336 18.8304 EEEDEEHSGNDSDGS-p O75419-3;S144-p EEEDEEHSGNDSDGS 0.35447381572243 0.808416707294592 -0.133666666666667 0.025 8.37064643965899 1.29337441766101 -0.133666666666667 0.025 0.145524245419336 0.742442044886473 -1.69940474637192 0.345895862503798 O75419 CDC45 O75419.3.S144.p_CDC45 O75419-3_S144sS148s_2_2_144_148 O75419-3 O75419-3|O75419-2 Isoform 3 of Cell division control protein 45 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28750.28750.5 9.2 9.2 1.204 5 2 2 0 1089.2924 5281.4911 S144s N146n S148s TMT10 117 (K) LLIKQDDDLEVPAYEDIFRDEEEDEEHsGnDsDGSEPSEK (R) LLIKQDDDLEVPAY(0.0)EDIFRDEEEDEEHS(0.99)GN(1.0)DS(0.99)DGS(0.0)EPS(0.0)EK K:TMT10,s:Phosphorylated S,n:Deamidated CDC45 69451.6 2 1 6210.1 13.1 HUMAN 2 -8.3706 1.2934 EEEDELESGDQEDED-p O60763-2;S953-p EEEDELESGDQEDED 0.819842974577855 0.755077531245582 -0.0326666666666667 0.0413333333333333 1.66223238077451 1.68632339474713 -0.0326666666666667 0.0413333333333334 0.681988045348831 0.678215421235731 -0.432630012876446 0.438110277618042 O60763 USO1 O60763.2.S953.p_USO1 O60763-2_S953s _1_1_953_953 O60763-2 O60763-2 Isoform 2 of General vesicular transport factor p115 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20199.20199.5 29.41 29.41 4.712 2 1 1 0 969.846 4765.2215 S953s TMT10 938 (K) LKDLGHPVEEEDELEsGDQEDEDDESEDPGKDLDHI (-) LKDLGHPVEEEDELES(0.99)GDQEDEDDES(0.0)EDPGKDLDHI K:TMT10,s:Phosphorylated S USO1 110105.5 9 2 2134.1 96.34 HUMAN 1 -1.6622 1.6863 EEEDEYETSGEGQDI-p Q9NUW8;T147-p EEEDEYETSGEGQDI 0.622841097517516 0.0793963991701184 0.0716666666666667 0.215666666666667 3.82088683671947 14.5978695518711 0.0716666666666667 0.215666666666667 0.41486931696387 0.0346906985262422 0.882733324922362 2.80159764707162 Q9NUW8 TDP1 Q9NUW8.T147.p_TDP1 Q9NUW8_T147tS148s_2_2_147_148 Q9NUW8 Q9NUW8|E7EPD8|G3V2F4|Q9BRS7|G3V5H9|G3V4W8 Tyrosyl-DNA phosphodiesterase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31649.31860.3 13.98 13.98 6.819 3 2 2 0 1202.8718 3446.6764 T147t S148s TMT10 138 (R) LKEEEDEYEtsGEGQDIWDMLDK (G) LKEEEDEY(0.0)ET(0.99)S(0.99)GEGQDIWDMLDK K:TMT10,t:Phosphorylated T,s:Phosphorylated S TDP1 68818.5 2 10 1900.1 108.34 HUMAN 1 3.8209 14.5979 EEEDGTGSPQLNNR_-p P49407;S412-p EEEDGTGSPQLNNR_ 0.581766024502004 0.0902486627118673 0.0756666666666667 0.207 4.32885645306543 13.8204507201272 0.0756666666666667 0.207 0.369074767375065 0.0414910980048507 0.979491650484963 2.65844175224066 P49407 ARRB1 P49407.S412.p_ARRB1 P49407_S412s _1_1_412_412 P49407 P49407|P49407-2 Beta-arrestin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6904.6904.3 19.28 16.82 2.284 2 1 1 0 857.7257 2491.1949 S412s TMT10 401 (K) DDKEEEEDGTGsPQLNNR (-) DDKEEEEDGT(0.0)GS(0.99)PQLNNR K:TMT10,s:Phosphorylated S ARRB1 47464.2 23 3 1962.1 105.05 HUMAN 1 4.3289 13.8205 EEEDIRVSITEKCAK-p P22694-2;S386-p EEEDIRVSITEKCAK 0.7281095523922 0.103910223080108 0.0546666666666667 0.247 2.61511777966365 12.9905820608926 0.0546666666666667 0.247 0.547631249127107 0.0502275267832808 0.641092305782996 2.5079951516198 P22694 PRKACB P22694.2.S386.p_PRKACB P22694-2_S386s _1_1_386_386 P22694-2 P22694-2|P22694-9|P22694-6|A0A0A0MS54|P22694-7|P22694-5|P22694-3|P22694-4 Isoform 2 of cAMP-dependent protein kinase catalytic subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19868.19868.4 16.71 16.71 2.17 6 1 1 0 862.6602 3367.633 S386s TMT10 366 (K) FRGSGDTSNFDDYEEEDIRVsITEK (C) FRGS(0.0)GDT(0.0)S(0.0)NFDDY(0.0)EEEDIRVS(0.99)IT(0.0)EK K:TMT10,s:Phosphorylated S PRKACB 46406.2 11 7 1853.2 110.97 HUMAN 1 2.6151 12.9906 EEEEAGESVEDIFSE-p Q8TDD1-2;S644-p EEEEAGESVEDIFSE 0.42081761725115 0.481872898791056 -0.214333333333333 0.083 6.93368223358472 4.23238377143092 -0.214333333333333 0.083 0.202596424568341 0.377365004586583 -1.44939957315272 0.961127606859326 Q8TDD1 DDX54 Q8TDD1.2.S644.p_DDX54 Q8TDD1-2_S644s _1_1_644_644 Q8TDD1-2 Q8TDD1-2 Isoform 2 of ATP-dependent RNA helicase DDX54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28184.28184.4 21.33 21.33 5.843 2 1 1 0 815.6353 3179.5632 S644s TMT10 632 (K) QPEKEEEEEAGEsVEDIFSEVVGR (K) QPEKEEEEEAGES(0.99)VEDIFS(0.0)EVVGR K:TMT10,s:Phosphorylated S DDX54 98949.4 4 4 373.1 338.92 HUMAN 1 -6.9337 4.2324 EEEEDDDSGEEMKAL-p Q08495;S226-p EEEEDDDSGEEMKAL 0.633204865850603 0.0545600802246113 -0.0863333333333334 0.289666666666667 3.69715160749582 16.8381824145758 -0.0863333333333334 0.289666666666667 0.4268593898343 0.0207100791430638 -0.85877831528142 3.22840023023402 Q08495 DMTN Q08495.S226.p_DMTN Q08495_S226s_1_1_226_226 Q08495 Q08495|Q08495-2|Q08495-4|Q08495-3 Dematin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4577.4577.3 17.66 17.66 99 1 1 1 0 923.0451 2671.1565 S226s M230m TMT10 213 (R) RGAEEEEEEEDDDsGEEmK (A) RGAEEEEEEEDDDS(1.0)GEEM(1.0)K K:TMT10,s:Phosphorylated S,m:Oxidized methionine DMTN 45627.7 4 5 1283.1 158.63 HUMAN 1 -3.6972 16.8382 EEEEDQETPSRNLRV-p Q9UKV3;T254-p EEEEDQETPSRNLRV 0.206446708127283 0.228720944989482 0.311 0.211333333333333 13.2490918067854 8.43950978177206 0.311 0.211333333333333 0.0473250214328064 0.143234956935442 2.55605032264867 1.71075762197115 Q9UKV3 ACIN1 Q9UKV3.T254.p_ACIN1 Q9UKV3_T254t _1_1_254_254 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10054.10054.3 13.46 13.46 2.666 4 1 1 0 937.4294 2730.3016 T254t TMT10 239 (K) LSEGSQPAEEEEDQEtPSRNLR (V) LS(0.0)EGS(0.0)QPAEEEEDQET(0.99)PS(0.0)RNLR t:Phosphorylated T ACIN1 152258.2 1 5 32.2 899.18 HUMAN 1 13.2491 8.4395 EEEEEDDSAEEGGAA-p Q9Y2K7;S869-p EEEEEDDSAEEGGAA 0.463373807519165 0.400186428957064 0.127666666666667 0.135333333333333 6.16387768280309 5.29079288921906 0.127666666666667 0.135333333333333 0.241886834858852 0.295747247301991 1.31370495573112 1.15684491899237 Q9Y2K7 KDM2A Q9Y2K7.S869.p_KDM2A Q9Y2K7_S869s _1_1_869_869 Q9Y2K7 Q9Y2K7|I3VM54|Q9Y2K7-2|Q9Y2K7-5|Q9Y2K7-4 Lysine-specific demethylase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9368.9368.3 26.62 26.62 26.619 2 1 1 0 1334.8679 3922.618 S869s TMT10 844 (R) TPQRGDEEGLGGEEEEEEEEEEEDDsAEEGGAAR (L) T(0.0)PQRGDEEGLGGEEEEEEEEEEEDDS(0.99)AEEGGAAR s:Phosphorylated S KDM2A 135243.8 3 14 409.1 323.7 HUMAN 1 6.1639 5.2908 EEEEEDDSEEEDLAD-p Q9UKN5;S770-p EEEEEDDSEEEDLAD 0.63773661668203 0.194552443640877 -0.0826666666666667 0.246333333333333 3.64520838730363 9.34907639360237 -0.0826666666666667 0.246333333333333 0.431995438705341 0.116169564333069 -0.848672740595673 1.86810760221847 Q9UKN5 PRDM4 Q9UKN5.S770.p_PRDM4 Q9UKN5_S770s _1_1_770_770 Q9UKN5 Q9UKN5 PR domain zinc finger protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15620.15620.3 31.71 31.71 7.363 8 1 1 0 1256.4937 3687.4933 S770s TMT10 754 (K) GPTSSSSAPEEEEEDDsEEEDLADSVGTEDCR (I) GPT(0.0)S(0.0)S(0.0)S(0.0)S(0.0)APEEEEEDDS(0.99)EEEDLADS(0.0)VGT(0.0)EDCR C:Carbamidomethylation,s:Phosphorylated S PRDM4 89344.8 2 3 2760.1 71.49 HUMAN 1 -3.6452 9.3491 EEEEEEDSDEEDQRS-p Q96F63;S257-p EEEEEEDSDEEDQRS 0.441116759971823 0.0370459736980261 -0.123666666666667 0.302333333333333 6.54457129701277 19.2432244032773 -0.123666666666667 0.302333333333333 0.221586281889974 0.0119035790305647 -1.3810328427012 3.71507780497994 Q96F63 CCDC97 Q96F63.S257.p_CCDC97 Q96F63_S257s _1_1_257_257 Q96F63 Q96F63 Coiled-coil domain-containing protein 97 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21191.21191.5 27.88 27.88 5.051 4 1 1 0 1116.4987 5498.3985 S257s TMT10 237 (R) LLQQQEEEEACLEEEEEEEDsDEEDQRSGKDSEAWVPDSEER (L) LLQQQEEEEACLEEEEEEEDS(0.99)DEEDQRS(0.0)GKDS(0.0)EAWVPDS(0.0)EER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCDC97 39288.2 2 2 1741.1 118.22 HUMAN 1 -6.5446 19.2432 EEEEEEGSPQEEEEE-p A0A0G2JPP5;S668-p EEEEEEGSPQEEEEE 0.614858955839297 0.0180501591213868 0.0723333333333333 0.532666666666667 3.92051555351598 24.0092727180092 0.0723333333333333 0.532666666666667 0.405460400150443 0.00397258069874777 0.901905293437839 4.79147967873956 A0A0G2JPP5 SCRIB A0A0G2JPP5.S668.p_SCRIB A0A0G2JPP5_S668s _1_1_668_668 A0A0G2JPP5 A0A0G2JPP5|A0A0G2JNZ2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7701.7701.4 21.59 21.59 99 1 1 1 0 897.8808 3508.5247 S668s TMT10 657 (R) AQKEEEEEEEGsPQEEEEEEEEENR (A) AQKEEEEEEEGS(1.0)PQEEEEEEEEENR K:TMT10,s:Phosphorylated S SCRIB 178690.9 1 12 22.1 1004.81 HUMAN 1 3.9205 24.0093 EEEEEIHSPTLLPEA-p Q9H9Z2;S200-p EEEEEIHSPTLLPEA 0.151198103969209 0.225371373099718 -0.386666666666667 -0.278666666666667 16.5305894274913 8.52296142710964 -0.386666666666667 -0.278666666666667 0.0222300816196266 0.140508907586952 -3.17074363329891 -1.7251974731289 Q9H9Z2 LIN28A Q9H9Z2.S200.p_LIN28A Q9H9Z2_S200s _1_1_200_200 Q9H9Z2 Q9H9Z2 Protein lin-28 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18146.18146.3 15.83 15.83 1.936 2 1 1 0 758.6857 2194.0713 S200s TMT10 193 (R) EEEEEIHsPTLLPEAQN (-) EEEEEIHS(0.99)PT(0.0)LLPEAQN s:Phosphorylated S LIN28A 23256 7 2 3712.1 44.74 HUMAN 1 -16.5306 -8.523 EEEEEQISESESEDE-p Q12874;S365-p EEEEEQISESESEDE 0.151837827094672 0.476441961999805 -0.373 0.101 16.4832607006789 4.29377124255473 -0.373 0.101 0.02247366640212 0.372068476296406 -3.16154014343695 0.972710236528685 Q12874 SF3A3 Q12874.S365.p_SF3A3 Q12874_S365sS367sS369s_3_3_365_369 Q12874 Q12874 Splicing factor 3A subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19076.19076.4 11.3 7.57 3.127 5 3 3 0 1075.4448 4057.841 S365s S367s S369s N374n TMT10 352 (R) TGEEREEEEEEQIsEsEsEDEEnEIIYNPK (N) T(0.0)GEEREEEEEEQIS(0.99)ES(0.99)ES(0.99)EDEEN(0.99)EIIY(0.0)N(0.0)PK K:TMT10,s:Phosphorylated S,n:Deamidated SF3A3 59190.2 5 7 2105.1 97.51 HUMAN 1 -16.4833 4.2938 EEEEERQSGNTEQKS-p Q9NTI5;S1334-p EEEEERQSGNTEQKS 0.158960913482591 0.00804251812163316 0.236666666666667 0.464 15.9974168734508 29.8446655249469 0.236666666666667 0.464 0.0251338091297925 0.00103641442156769 3.06769431261838 6.37496567472065 Q9NTI5 PDS5B Q9NTI5.S1334.p_PDS5B Q9NTI5_S1334s _1_1_1334_1334 Q9NTI5 Q9NTI5|Q9NTI5-2|Q9NTI5-5 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6912.6912.4 21.13 16.08 1.168 3 1 1 0 838.9095 3272.6486 S1334s TMT10 1318 (K) KSGPPAPEEEEEEERQsGNTEQK (S) KS(0.0)GPPAPEEEEEEERQS(0.99)GNT(0.0)EQK K:TMT10,s:Phosphorylated S PDS5B 165919.5 4 14 100.1 597.99 HUMAN 1 15.9974 29.8447 EEEEGEKTEDESLVE-p P49321-3;T125-p EEEEGEKTEDESLVE 0.540088410971781 0.0383760722253743 0.0883333333333333 0.473 4.93894519698248 19.0228748186108 0.0883333333333333 0.473 0.320704814934349 0.0125231193081629 1.09285751368456 3.66909449120383 P49321 NASP P49321.3.T125.p_NASP P49321-3_T125t_1_1_125_125 P49321-3 P49321-3|P49321-4 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24013.24013.5 27.58 27.58 1.253 2 1 1 0 997.0602 4900.2955 T125t N133n TMT10 103 (R) MENGVLGNALEGVHVEEEEGEKtEDESLVEnNDNIDEEAR (E) MEN(0.0)GVLGN(0.0)ALEGVHVEEEEGEKT(0.99)EDES(0.0)LVEN(0.99)N(0.0)DN(0.0)IDEEAR K:TMT10,t:Phosphorylated T,n:Deamidated NASP 86552 5 3 87.1 626.46 HUMAN 1 4.9389 19.0229 EEEEIRVSINEKCGK-p P17612;S339-p EEEEIRVSINEKCGK 0.787952750145453 0.200823122032482 0.0386666666666667 0.144 1.99519745510987 9.17273408565268 0.0386666666666667 0.144 0.631655459964842 0.120983624559583 0.507738219584092 1.83759323974674 P17612 PRKACA P17612.S339.p_PRKACA P17612_S339s _1_1_339_339 P17612 P17612|P17612-2 cAMP-dependent protein kinase catalytic subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.38832.39322.5 23.23 23.23 9.948 4 1 1 0 737.9631 3605.8214 S339s TMT10 319 (K) FKGPGDTSNFDDYEEEEIRVsINEK (C) FKGPGDT(0.0)S(0.0)NFDDY(0.0)EEEEIRVS(0.99)INEK K:TMT10,s:Phosphorylated S PRKACA 40703 70 5 1853.1 110.97 HUMAN 1 1.9952 9.1727 EEEEKEKSLIVEGKR-p P35659;S51-p EEEEKEKSLIVEGKR 0.0393140618581084 0.0412930985857232 -0.784333333333333 -0.357666666666667 31.7134478262855 18.5556970020702 -0.784333333333334 -0.357666666666667 0.000673992738246533 0.0139453782938592 -6.97086435507073 -3.57257454762392 P35659 DEK P35659.S51.p_DEK P35659_S51s _1_1_51_51 P35659 P35659|B4DFG0 Protein DEK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11962.11962.3 10.04 10.04 99 1 1 1 0 480.6166 1359.8724 S51s TMT10 51 (K) sLIVEGKR (E) S(1.0)LIVEGKR K:TMT10,s:Phosphorylated S DEK 42958.8 2 2 488.1 294.94 HUMAN 1 -31.7134 -18.5557 EEEEKESSGEIEAAP-p Q6AI08;S337-p EEEEKESSGEIEAAP 0.685838730926419 0.00807787854807093 0.0586666666666667 0.713666666666667 3.07300718717645 29.8109712495031 0.0586666666666667 0.713666666666667 0.492832433603875 0.00104448660572044 0.735202268975919 6.36481165538843 Q6AI08 HEATR6 Q6AI08.S337.p_HEATR6 Q6AI08_S336sS337s_2_2_336_337 Q6AI08 Q6AI08|K7EIX2|A0A087WXZ7|K7ELR8 HEAT repeat-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12644.12644.4 11.91 11.91 11.913 4 2 2 0 902.443 3446.8218 S336s S337s TMT10 325 (K) KIQQGEEEEKEssGEIEAAPVTGTGR (V) KIQQGEEEEKES(0.99)S(0.99)GEIEAAPVT(0.0)GT(0.0)GR K:TMT10,s:Phosphorylated S HEATR6 130490.6 2 4 2005.1 102.98 HUMAN 1 3.073 29.811 EEEENRMSEEAEKQY-p Q8N128-2;S179-p EEEENRMSEEAEKQY 0.953803111483038 0.240957228886928 0.00899999999999999 -0.217333333333333 0.402080009861412 8.1425442766556 0.00899999999999999 -0.217333333333333 0.911574145495273 0.153371820401101 0.116346305592709 -1.65934369871889 Q8N128 FAM177A1 Q8N128.2.S179.p_FAM177A1 Q8N128-2_S179s _1_1_179_179 Q8N128-2 Q8N128-2 Isoform 2 of Protein FAM177A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9505.9505.5 11.55 11.55 99 1 1 1 0 702.7405 3429.7171 S179s TMT10 165 (R) MKKEEEEEEEENRMsEEAEK (Q) MKKEEEEEEEENRMS(1.0)EEAEK K:TMT10,s:Phosphorylated S FAM177A1 26101.7 2 1 1328.1 153.52 HUMAN 1 0.4021 -8.1425 EEEEREDSDTEEQVP-p Q9NU22;S5015-p EEEEREDSDTEEQVP 0.304948444283714 0.0457742790787973 -0.458 0.585 9.66633933124458 17.9207697789451 -0.458 0.585 0.107985654995606 0.0161407244011257 -1.92379595613813 3.44344492723496 Q9NU22 MDN1 Q9NU22.S5015.p_MDN1 Q9NU22_S5015s _1_1_5015_5015 Q9NU22 Q9NU22 Midasin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15640.15640.4 27.08 27.08 1.318 2 1 1 0 1289.8076 5076.2626 S5015s TMT10 4987 (K) DKEADEEGGENGPADQGFQPQEEEEREDsDTEEQVPEALER (K) DKEADEEGGENGPADQGFQPQEEEEREDS(0.99)DT(0.0)EEQVPEALER K:TMT10,s:Phosphorylated S MDN1 638399.7 4 6 905.1 202.58 HUMAN 1 -9.6663 17.9208 EEEETENSLPIPASK-p Q9H2G2;S330-p EEEETENSLPIPASK 0.92600024412102 0.561971783157779 -0.0146666666666667 -0.0673333333333333 0.65909866788522 3.37238907079806 -0.0146666666666667 -0.0673333333333333 0.859191819148158 0.460003454281508 -0.186035907595937 -0.794965183181375 Q9H2G2 SLK Q9H2G2.S330.p_SLK Q9H2G2_S330s _1_1_330_330 Q9H2G2 Q9H2G2|Q9H2G2-2 STE20-like serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20815.20815.4 20.77 16.46 3.267 4 1 1 0 1000.7322 3919.9275 S330s TMT10 309 (K) AEVTEEVEDGKEEDEEEETENsLPIPASK (R) AEVT(0.0)EEVEDGKEEDEEEET(0.0)ENS(0.99)LPIPAS(0.0)K K:TMT10,s:Phosphorylated S SLK 143320 1 4 329.1 359.67 HUMAN 1 -0.6591 -3.3724 EEEGGGGSGGRRQGG-p Q93074-2;S1258-p EEEGGGGSGGRRQGG 0.452617719392258 0.899748803351736 0.0996666666666667 0.0126666666666667 6.3504733930395 0.64245057192454 0.0996666666666667 0.0126666666666667 0.231714206128618 0.862491736501889 1.34676597483064 0.181601176422973 Q93074 MED12 Q93074.2.S1258.p_MED12 Q93074-2_S1258s _1_1_1258_1258 Q93074-2 Q93074-2|Q93074-3|Q7Z3Z5 Isoform 2 of Mediator of RNA polymerase II transcription subunit 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14258.14258.4 12.52 12.52 1.117 5 1 1 0 698.0699 2709.2913 S1258s TMT10 1237 (K) GSGFTVTGGTEELPEEEGGGGsGGRR (Q) GS(0.0)GFT(0.0)VT(0.0)GGT(0.0)EELPEEEGGGGS(0.99)GGRR s:Phosphorylated S MED12 246128.1 2 7 2302.1 89.02 HUMAN 1 6.3505 0.6425 EEEGQMSS_______-p Q9BRL6;S282-p EEEGQMSS_______ 0.860894111325596 0.251723986678714 0.0266666666666667 0.139333333333333 1.27115704309508 7.88919379224621 0.0266666666666667 0.139333333333333 0.746249916753439 0.162585054444781 0.340577338066446 1.61542807642695 Q9BRL6 SRSF8 Q9BRL6.S282.p_SRSF8 Q9BRL6_S282s_1_1_282_282 Q9BRL6 Q9BRL6|Q9BRL6-2 Serine/arginine-rich splicing factor 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5106.5106.3 11.47 11.47 1.847 3 1 1 0 705.0064 2017.0425 M280m S282s TMT10 269 (K) RPPKSPEEEGQmSs (-) RPPKS(0.0)PEEEGQM(1.0)S(0.0)S(0.99) K:TMT10,m:Oxidized methionine,s:Phosphorylated S SRSF8 32401.1 9 7 1728.1 119.22 HUMAN 1 1.2712 7.8892 EEEGRDISNGALAFT-p P00519-2;S661-p EEEGRDISNGALAFT 0.398763482674499 0.543354474461816 -0.119 -0.0723333333333333 7.36883067544104 3.56308804520454 -0.119 -0.0723333333333333 0.18328078338257 0.440241718893716 -1.52543304194685 -0.832504384842565 P00519 ABL1 P00519.2.S661.p_ABL1 P00519-2_S661s _1_1_661_661 P00519-2 P00519-2 Isoform IB of Tyrosine-protein kinase ABL1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23434.23434.4 11.38 10.89 1.965 5 1 1 0 990.2651 3878.0812 S661s Hydrogen 659 (R) DIsNGALAFTPLDTADPAKSPKPSNGAGVPNGALR (E) DIS(0.99)NGALAFT(0.0)PLDT(0.0)ADPAKS(0.0)PKPS(0.0)NGAGVPNGALR K:TMT10-Lys-Only,s:Phosphorylated S ABL1 125637.1 1 6 347.1 352.28 HUMAN 1 -7.3688 -3.5631 EEEGRKRYEAQKLER-p O00154;Y194-p EEEGRKRYEAQKLER 0.552777326044719 0.0278658430716307 0.209666666666667 0.496333333333333 4.7518997822025 21.0706805402075 0.209666666666667 0.496333333333333 0.334818943579071 0.00781505332971489 1.0583898756377 4.10848131607394 O00154 ACOT7 O00154.Y194.p_ACOT7 O00154_Y194y _1_1_194_194 O00154 O00154|O00154-7|O00154-5|O00154-4|O00154-6|O00154-3|O00154-2 Cytosolic acyl coenzyme A thioester hydrolase GG20160819_MSz_CCLE_T4D7_pY_Injection_02.9192.9192.3 12.04 4.67 99 1 1 1 0 525.6169 1494.868 Y194y TMT10 194 (R) yEAQKLER (M) Y(1.0)EAQKLER K:TMT10,y:Phosphorylated Y ACOT7 42480 1 1 294.1 12.04 HUMAN 1 4.7519 21.0707 EEEKAAATPKKTVPK-p Q14978-3;T239-p EEEKAAATPKKTVPK 0.206237410526435 0.00917359434218356 1.26233333333333 -1.59566666666667 13.2598082324095 28.8069026019869 1.26233333333333 -1.59566666666667 0.0472083886195871 0.00131616318807976 2.5579900827556 -6.06805748399398 Q14978 NOLC1 Q14978.3.T239.p_NOLC1 Q14978-3_T239t _1_1_239_239 Q14978-3 Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8138.8138.3 10.87 10.87 2.49 2 1 1 0 703.4383 2028.3351 T239t TMT10 236 (K) AAAtPKKTVPK (K) AAAT(0.99)PKKT(0.0)VPK K:TMT10,t:Phosphorylated T NOLC1 73744 1 3 72.1 655.55 HUMAN 1 13.2598 -28.8069 EEEKDRWSDNQSSGK-p Q9NRR4;S373-p EEEKDRWSDNQSSGK 0.779715637611303 0.0386192518351755 0.0503333333333333 -0.317666666666667 2.07706628985094 18.9819837976056 0.0503333333333333 -0.317666666666667 0.619859656148633 0.0126415876518642 0.525802080246586 -3.66059389619192 Q9NRR4 DROSHA Q9NRR4.S373.p_DROSHA Q9NRR4_S373s _1_1_373_373 Q9NRR4 Q9NRR4 Ribonuclease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11871.11871.5 12.3 7.06 3.396 3 1 1 0 644.9279 3140.6419 S373s TMT10 365 (R) WEEEKDRWsDNQSSGKDK (N) WEEEKDRWS(0.99)DNQS(0.0)S(0.0)GKDK K:TMT10,s:Phosphorylated S DROSHA 160910.7 4 4 1630.1 125.18 HUMAN 1 2.0771 -18.982 EEEKKAPTPQEKKRR-p P35269;T331-p EEEKKAPTPQEKKRR 0.143507905748536 0.0145535069518938 0.276 0.362333333333333 17.2326602524877 25.4432953715732 0.276 0.362333333333333 0.0189118482650471 0.00285542306226313 3.30860062225201 5.1503557921395 P35269 GTF2F1 P35269.T331.p_GTF2F1 P35269_T331t _1_1_331_331 P35269 P35269 General transcription factor IIF subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.6643.6643.3 11 11 99 1 1 1 0 555.9899 1585.9881 T331t TMT10 328 (K) KAPtPQEK (K) KAPT(1.0)PQEK K:TMT10,t:Phosphorylated T GTF2F1 58296.5 7 3 1159.1 171.17 HUMAN 1 17.2327 25.4433 EEEKLSPSPTTEDPR-p Q9BTC8;S430-p EEEKLSPSPTTEDPR 0.125338530777651 0.904368351899914 0.353666666666667 0.0126666666666667 18.7619822655261 0.608698634210229 0.353666666666667 0.0126666666666667 0.0132984729257148 0.869220852770161 3.61815128862652 0.172606644894171 Q9BTC8 MTA3 Q9BTC8.S430.p_MTA3 Q9BTC8_S430s _1_1_430_430 Q9BTC8 Q9BTC8|E7EV10 Metastasis-associated protein MTA3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9833.9833.2 11.06 3.96 1.427 4 1 1 0 754.8633 1428.7532 S430s TMT10 427 (K) LSPsPTTEDPR (V) LS(0.0)PS(0.99)PT(0.0)T(0.0)EDPR s:Phosphorylated S MTA3 68244.2 4 4 1441.1 142.09 HUMAN 1 18.762 0.6087 EEELAAMSPTAAAVA-p P12270;S379-p EEELAAMSPTAAAVA 0.300816179735712 0.990455751802061 -0.159333333333333 -0.0013333333333333 9.79763265767049 0.0608576440086361 -0.159333333333333 -0.00133333333333329 0.10476994941694 0.986084734555468 -1.94657283076206 -0.0182597591535631 P12270 TPR P12270.S379.p_TPR P12270_S379s _1_1_379_379 P12270 P12270|P12270-2 Nucleoprotein TPR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26864.26864.2 24.36 24.36 1.855 3 1 1 0 1284.6728 2488.3733 S379s TMT10 367 (K) GAILSEEELAAMsPTAAAVAK (I) GAILS(0.0)EEELAAMS(0.99)PT(0.0)AAAVAK K:TMT10,s:Phosphorylated S TPR 267687.4 5 3 385.1 333.55 HUMAN 1 -9.7976 -0.0609 EEELATLSEEEIAMA-p P56192;S229-p EEELATLSEEEIAMA 0.605634492207637 0.0310908781831712 0.099 0.337333333333333 4.02569665120648 20.365298967626 0.099 0.337333333333333 0.395758576162671 0.00919327186289311 0.922038364455924 3.95400325406768 P56192 MARS P56192.S229.p_MARS P56192_S229s _1_1_229_229 P56192 P56192|P56192-2 Methionine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.37009.37009.3 20.05 20.05 1.146 4 1 1 0 1219.9249 3577.7871 S229s TMT10 215 (R) AVTNEPEEEELATLsEEEIAMAVTAWEK (G) AVT(0.0)NEPEEEELAT(0.0)LS(0.99)EEEIAMAVT(0.0)AWEK K:TMT10,s:Phosphorylated S MARS 102312 2 1 2147.1 95.78 HUMAN 1 4.0257 20.3653 EEELKNFSGPVPDLP-p Q9GZZ9;S358-p EEELKNFSGPVPDLP 0.100718023880825 0.198772906970298 -0.684333333333333 0.136666666666667 21.0878474001089 9.23270751005455 -0.684333333333333 0.136666666666667 0.00778422283899606 0.119324397174916 -4.11640177654721 1.84796973537439 Q9GZZ9 UBA5 Q9GZZ9.S358.p_UBA5 Q9GZZ9_S358s _1_1_358_358 Q9GZZ9 Q9GZZ9|E7EQ61|Q9GZZ9-2 Ubiquitin-like modifier-activating enzyme 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.34103.34303.3 18.93 13.39 4.873 4 1 1 0 918.4896 2673.4904 S358s TMT10 356 (K) NFsGPVPDLPEGITVAYTIPK (K) NFS(0.99)GPVPDLPEGIT(0.0)VAY(0.0)T(0.0)IPK K:TMT10,s:Phosphorylated S UBA5 45318.8 4 3 3261.1 55.65 HUMAN 1 -21.0878 9.2327 EEELPDISPPIVIPD-p Q92995;S630-p EEELPDISPPIVIPD 0.988436249417552 0.0704795398131942 0.00266666666666666 0.220333333333333 0.103971256978418 15.3176157553943 0.00266666666666664 0.220333333333333 0.976344028323645 0.0293926284268184 0.0310483139798233 2.93626925241376 Q92995 USP13 Q92995.S630.p_USP13 Q92995_S630s _1_1_630_630 Q92995 Q92995|Q92995-2 Ubiquitin carboxyl-terminal hydrolase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30922.30922.4 14.75 14.29 6.745 2 1 1 0 746.6401 2903.5654 S630s TMT10 618 (R) GLQPGEEELPDIsPPIVIPDDSK (D) GLQPGEEELPDIS(0.99)PPIVIPDDS(0.0)K K:TMT10,s:Phosphorylated S USP13 98067.1 3 5 1969.1 104.91 HUMAN 1 0.104 15.3176 EEEMETESDAEVECD-p Q9NWZ8;S126-p EEEMETESDAEVECD 0.243304829027304 0.0560496020654508 0.187 0.243333333333333 11.7421281767438 16.6733804594462 0.187 0.243333333333333 0.0669556425739042 0.0215110670542922 2.28667709931378 3.19620101019277 Q9NWZ8 GEMIN8 Q9NWZ8.S126.p_GEMIN8 Q9NWZ8_S126s _1_1_126_126 Q9NWZ8 Q9NWZ8 Gem-associated protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25738.25738.5 28.66 25.89 2.335 7 1 1 0 1057.6926 5204.49 S126s TMT10 106 (R) IQASTKEDQALSKEEEMETEsDAEVECDLSNMEITEELR (Q) IQAS(0.0)T(0.0)KEDQALS(0.0)KEEEMET(0.0)ES(0.99)DAEVECDLS(0.0)NMEIT(0.0)EELR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GEMIN8 28921.4 4 2 2387.1 85.57 HUMAN 1 11.7421 16.6734 EEENESLSGTEFTAS-p Q16533;S355-p EEENESLSGTEFTAS 0.182000008902576 0.0414423750173701 -0.559666666666667 0.250333333333333 14.5682920747271 18.5330736608177 -0.559666666666667 0.250333333333333 0.0349277646911901 0.0140182123326474 -2.79786929374438 3.56793346158705 Q16533 SNAPC1 Q16533.S355.p_SNAPC1 Q16533_S355s _1_1_355_355 Q16533 Q16533 snRNA-activating protein complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26233.26233.5 22.67 22.67 1.132 8 1 1 0 885.2627 4342.3033 S355s TMT10 334 (K) EDKPLSLSMPVITEEEENESLsGTEFTASKK (R) EDKPLS(0.0)LS(0.0)MPVIT(0.0)EEEENES(0.0)LS(0.99)GT(0.0)EFT(0.0)AS(0.0)KK K:TMT10,s:Phosphorylated S SNAPC1 43221.8 5 2 2004.1 103.11 HUMAN 1 -14.5683 18.5331 EEEQEGDSGEQETGA-p Q96KC8;S430-p EEEQEGDSGEQETGA 0.387340319727748 0.219355084661698 0.157333333333333 -0.127666666666667 7.61738377054518 8.67335439166817 0.157333333333333 -0.127666666666667 0.173085873025665 0.135726472127435 1.568707543529 -1.75121465132221 Q96KC8 DNAJC1 Q96KC8.S430.p_DNAJC1 Q96KC8_S430s _1_1_430_430 Q96KC8 Q96KC8 DnaJ homolog subfamily C member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16765.16765.4 29.41 29.41 4.697 7 1 1 0 1197.283 4706.1445 S430s TMT10 402 (K) TATTLPDDMITQREDAEGVAAEEEQEGDsGEQETGATDARPR (R) T(0.0)AT(0.0)T(0.0)LPDDMIT(0.0)QREDAEGVAAEEEQEGDS(0.99)GEQET(0.0)GAT(0.0)DARPR s:Phosphorylated S DNAJC1 64224 6 4 1670.1 122.29 HUMAN 1 7.6174 -8.6734 EEEQGYDSEKEKKEE-p Q05519;S434-p EEEQGYDSEKEKKEE 0.568009482556111 0.162228951183515 -0.172 0.445666666666667 4.52141874180387 10.3844374090235 -0.172 0.445666666666667 0.353067811685386 0.0915284818841781 -1.01557649190008 2.04772253482936 Q05519 SRSF11 Q05519.S434.p_SRSF11 Q05519_S434s _1_1_434_434 Q05519 Q05519|Q5T757 Serine/arginine-rich splicing factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9332.9332.3 16.63 16.63 3.743 4 1 1 0 877.0616 2549.2044 S434s TMT10 420 (K) QVTRDYDEEEQGYDsEK (E) QVT(0.0)RDY(0.0)DEEEQGY(0.0)DS(0.99)EK K:TMT10,s:Phosphorylated S SRSF11 53655.4 7 1 185.2 475.04 HUMAN 1 -4.5214 10.3844 EEEQISESESEDEEN-p Q12874;S367-p EEEQISESESEDEEN 0.151837827094672 0.476441961999805 -0.373 0.101 16.4832607006789 4.29377124255473 -0.373 0.101 0.02247366640212 0.372068476296406 -3.16154014343695 0.972710236528685 Q12874 SF3A3 Q12874.S367.p_SF3A3 Q12874_S365sS367sS369s_3_3_365_369 Q12874 Q12874 Splicing factor 3A subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19076.19076.4 11.3 7.57 3.127 5 3 3 0 1075.4448 4057.841 S365s S367s S369s N374n TMT10 352 (R) TGEEREEEEEEQIsEsEsEDEEnEIIYNPK (N) T(0.0)GEEREEEEEEQIS(0.99)ES(0.99)ES(0.99)EDEEN(0.99)EIIY(0.0)N(0.0)PK K:TMT10,s:Phosphorylated S,n:Deamidated SF3A3 59190.2 5 7 2105.1 97.51 HUMAN 1 -16.4833 4.2938 EEERKVHSPQQVDFR-p Q15746;S947-p EEERKVHSPQQVDFR 0.874541241919458 0.117316132236844 -0.0263333333333333 -0.273333333333333 1.13945726851632 12.2700649963075 -0.0263333333333334 -0.273333333333333 0.769226563402692 0.0592916450953934 -0.308503051641653 -2.37911156173782 Q15746 MYLK Q15746.S947.p_MYLK Q15746_S947s _1_1_947_947 Q15746 Q15746 Myosin light chain kinase, smooth muscle HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8663.8663.3 10.68 10.68 99 1 1 1 0 507.9202 1441.7749 S947s TMT10 945 (K) VHsPQQVDFR (S) VHS(1.0)PQQVDFR s:Phosphorylated S MYLK 213449.8 1 3 4738.1 27.26 HUMAN 1 -1.1395 -12.2701 EEERLKLSPSPSSRV-p P20700;S391-p EEERLKLSPSPSSRV 0.498143427920421 0.045835181623707 0.154333333333333 -0.398333333333333 5.5762905220372 17.9139703394212 0.154333333333333 -0.398333333333333 0.276930600741379 0.0161660145765915 1.20869683613064 -3.44207447544456 P20700 LMNB1 P20700.S391.p_LMNB1 P20700_S391s _1_1_391_391 P20700 Q03252|P20700 Lamin-B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11766.11970.2 12.4 12.4 1.75 4 1 1 0 805.4575 1529.9415 S391s TMT10 388 (R) LKLsPSPSSR (V) LKLS(0.99)PS(0.0)PS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S LMNB1 66692.5 17 10 440.1 312.01 HUMAN 1 5.5763 -17.914 EEERLRLSPSPTSQR-p P02545;S390-p EEERLRLSPSPTSQR 0.458945964648301 0.669362300955486 0.1 0.041 6.23859008282094 2.38265696480517 0.1 0.041 0.237761204222343 0.577742482908851 1.32695722726131 0.591896442865768 P02545 LMNA P02545.S390.p_LMNA P02545_S390s _1_1_390_390 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16780.16780.4 19.17 13.93 1.624 4 1 1 0 627.3282 2426.3201 S390s TMT10 379 (K) LLEGEEERLRLsPSPTSQR (S) LLEGEEERLRLS(0.99)PS(0.0)PT(0.0)S(0.0)QR s:Phosphorylated S LMNA 74423.5 30 17 60.1 706.83 HUMAN 1 6.2386 2.3827 EEESEDESNEEEEEE-p P51531;S1516-p EEESEDESNEEEEEE 0.0391574900042898 0.522504761726917 0.5205 -0.065 31.9216550712338 3.78776009446225 0.5205 -0.065 0.000642442839396743 0.418045921294764 7.03877751161574 -0.876193247559096 P51531 SMARCA2 P51531.S1516.p_SMARCA2 P51531_S1512sS1516s_2_2_1512_1516 P51531 P51531|P51531-2|B1ALG1 Probable global transcription activator SNF2L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11888.11888.4 13.1 13.1 3.865 4 2 2 0 1155.7577 4460.0777 S1512s S1516s TMT10 1504 (R) QKIAKEEEsEDEsNEEEEEEDEEESESEAK (S) QKIAKEEES(0.99)EDES(0.99)NEEEEEEDEEES(0.0)ES(0.0)EAK K:TMT10,s:Phosphorylated S SMARCA2 181903.8 2 26 392.2 331.85 HUMAN 2 31.9217 -3.7878 EEETGSPSEDGMQSA-p Q13610;S59-p EEETGSPSEDGMQSA 0.317722808999546 0.714457930300217 0.274333333333333 0.0543333333333333 9.32485814616171 2.01017664110244 0.274333333333333 0.0543333333333333 0.116819188595206 0.629480579399305 1.86461326638789 0.510995112766801 Q13610 PWP1 Q13610.S59.p_PWP1 Q13610_T55tS57sS59s_3_3_55_59 Q13610 Q13610|Q13610-2 Periodic tryptophan protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12955.12955.3 12.68 12.68 1.187 5 3 3 0 1179.8038 3297.5065 T55t S57s S59s TMT10 41 (K) EKLQEEGGGSDEEEtGsPsEDGMQSAR (T) EKLQEEGGGS(0.0)DEEET(0.99)GS(0.99)PS(0.99)EDGMQS(0.0)AR K:TMT10,t:Phosphorylated T,s:Phosphorylated S PWP1 56397.4 3 7 2267.1 90.54 HUMAN 1 9.3249 2.0102 EEETKGDSVEKNQGT-p Q6PJT7;S421-p EEETKGDSVEKNQGT 0.145152146047681 0.0246046968168013 -0.251333333333333 -0.311333333333333 17.1123333785507 21.8989484846871 -0.251333333333333 -0.311333333333333 0.0194431515877249 0.00645810573987956 -3.28479266765343 -4.29434532054286 Q6PJT7 ZC3H14 Q6PJT7.S421.p_ZC3H14 Q6PJT7_S421s _1_1_421_421 Q6PJT7 Q6PJT7|Q6PJT7-2|Q6PJT7-9 Zinc finger CCCH domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15359.15359.4 7.17 7.17 1.386 3 1 1 0 721.4095 2802.627 S421s TMT10 408 (R) ISPPIKEEETKGDsVEK (N) IS(0.0)PPIKEEET(0.0)KGDS(0.99)VEK K:TMT10,s:Phosphorylated S ZC3H14 83844.1 1 11 420.1 320.31 HUMAN 1 -17.1123 -21.8989 EEEVALRSDSEGSDY-p F5GWX5;S96-p EEEVALRSDSEGSDY 0.3626106053244 0.022328704096571 -0.148 -0.374666666666667 8.18535634281137 22.5531626830019 -0.148 -0.374666666666667 0.151867332830813 0.00555499575884562 -1.66730054841189 -4.44472956545313 F5GWX5 CHD4 F5GWX5.S96.p_CHD4 F5GWX5_S96s _1_1_96_96 F5GWX5 F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22023.22023.5 25.88 22.8 1.344 7 1 1 0 906.0349 4446.1563 S96s TMT10 74 (K) ELGDSSGEGPEFVEEEEEVALRsDSEGSDYTPGKK (K) ELGDS(0.0)S(0.0)GEGPEFVEEEEEVALRS(0.99)DS(0.0)EGS(0.0)DY(0.0)T(0.0)PGKK K:TMT10,s:Phosphorylated S CHD4 218583 4 2 49.1 753.68 HUMAN 1 -8.1854 -22.5532 EEEVDFLSERRMVKK-p Q14676;S176-p EEEVDFLSERRMVKK 0.221518365284452 0.0743005262384353 0.340333333333333 0.241666666666667 12.5984254271063 14.9851179740521 0.340333333333333 0.241666666666667 0.0549740150864043 0.0317313246601533 2.43895082699753 2.87378751760966 Q14676 MDC1 Q14676.S176.p_MDC1 Q14676_S176s _1_1_176_176 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.38588.38588.3 9.88 7.24 8.816 2 1 1 0 820.3991 2379.2241 S176s TMT10 162 (R) LLLAEDSEEEVDFLsERR (M) LLLAEDS(0.0)EEEVDFLS(0.99)ERR s:Phosphorylated S MDC1 227803.2 1 5 6.1 1662.62 HUMAN 1 12.5984 14.9851 EEEVDYESEEEEERE-p O95602;S1429-p EEEVDYESEEEEERE 0.49355245812918 0.576186197593455 0.189666666666667 0.196 5.64618401989511 3.22828232235449 0.189666666666667 0.196 0.272509469329065 0.475523262910475 1.22126773546425 0.766297247822304 O95602 POLR1A O95602.S1429.p_POLR1A O95602_S1429s _1_1_1429_1429 O95602 O95602|B9ZVN9 DNA-directed RNA polymerase I subunit RPA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8418.8418.3 21.51 17.75 7.115 2 1 1 0 908.7319 2644.215 S1429s TMT10 1419 (K) EKQEEEVDYEsEEEEER (E) EKQEEEVDY(0.0)ES(0.99)EEEEER K:TMT10,s:Phosphorylated S POLR1A 196804.6 3 2 2697.1 73.69 HUMAN 1 5.6462 3.2283 EEFETDSSDQQDITN-p Q6ZUT1-2;S126-p EEFETDSSDQQDITN 0.659829317652971 0.0199082106229544 0.0593333333333333 0.319666666666667 3.38277909205636 23.3281803060328 0.0593333333333333 0.319666666666667 0.458904261619996 0.00464709947913568 0.797142206442227 4.62716207474301 Q6ZUT1 C11orf57 Q6ZUT1.2.S126.p_C11orf57 Q6ZUT1-2_S125sS126s_2_2_125_126 Q6ZUT1-2 Q6ZUT1-2|Q6ZUT1-3 Isoform 2 of Uncharacterized protein NKAPD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24940.24940.3 19.1 19.1 2.233 5 2 2 0 1021.7798 2903.3835 S125s S126s TMT10 115 (K) ELYPEEFETDssDQQDITNGK (K) ELY(0.0)PEEFET(0.0)DS(0.99)S(0.99)DQQDIT(0.0)NGK K:TMT10,s:Phosphorylated S NKAPD1 34196.3 9 9 1271.1 159.85 HUMAN 1 3.3828 23.3282 EEFKKRFSDATSKAH-p Q86VP1-2;S225-p EEFKKRFSDATSKAH 0.128161948893481 0.00658370813716136 -0.318 -0.598333333333333 18.4749659194044 31.3566593777408 -0.318 -0.598333333333333 0.0142070336156888 0.000731701696921465 -3.55903517499872 -6.84424808574916 Q86VP1 TAX1BP1 Q86VP1.2.S225.p_TAX1BP1 Q86VP1-2_S225s _1_1_225_225 Q86VP1-2 B8ZZD4|Q86VP1|Q86VP1-2|Q86VP1-4|Q86VP1-3 Isoform 2 of Tax1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8183.8183.3 9.39 9.39 3.453 3 1 1 0 483.9216 1369.784 S225s TMT10 223 (K) RFsDATSK (A) RFS(0.99)DAT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S TAX1BP1 87225.4 2 3 2039.1 101.24 HUMAN 1 -18.475 -31.3567 EEFLRAPSPMEIDPA-p Q8NEV8;S393-p EEFLRAPSPMEIDPA 0.908569951975086 0.101881364056927 -0.0193333333333333 -0.287666666666667 0.819171747885417 13.103222507968 -0.0193333333333334 -0.287666666666667 0.828100077356302 0.0489415533442553 -0.227883528349771 -2.52828344865502 Q8NEV8 EXPH5 Q8NEV8.S393.p_EXPH5 Q8NEV8_S393s _1_1_393_393 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20304.20304.4 14.89 8.42 99 1 1 1 0 782.1318 3045.5352 S393s TMT10 381 (R) DRENQEEFLRAPsPMEIDPADK (Y) DRENQEEFLRAPS(1.0)PMEIDPADK K:TMT10,s:Phosphorylated S EXPH5 223884.5 3 4 129.1 537.25 HUMAN 1 -0.8192 -13.1032 EEGARVYSQVTVQRS-p Q8TE68;S685-p EEGARVYSQVTVQRS 0.342075757494071 0.0317929518081462 -0.135 -0.369666666666667 8.6554474226848 20.2228040143111 -0.135 -0.369666666666667 0.136287259191493 0.00949991235517457 -1.74871982422321 -3.92320707523146 Q8TE68 EPS8L1 Q8TE68.S685.p_EPS8L1 Q8TE68_S685s _1_1_685_685 Q8TE68 Q8TE68|B4DKV7|Q8TE68-2|Q8TE68-4|K7ELW3 Epidermal growth factor receptor kinase substrate 8-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11818.11818.2 12.24 12.24 3.19 3 1 1 0 694.8639 1308.7473 S685s TMT10 683 (R) VYsQVTVQR (S) VY(0.0)S(0.99)QVT(0.0)VQR s:Phosphorylated S EPS8L1 80534.9 1 16 326.1 361.27 HUMAN 1 -8.6554 -20.2228 EEGEEEGSESESRSV-p A0A0A0MT49;S1620-p EEGEEEGSESESRSV 0.947877052168416 0.0165690482196363 0.0103333333333333 0.439 0.462173621358319 24.5935241414061 0.0103333333333333 0.439 0.899047500296557 0.00347254262907687 0.132936301059782 4.93553012866527 A0A0A0MT49 NotFound A0A0A0MT49.S1620.p_NotFound A0A0A0MT49_S1604sS1609sS1620s_3_3_1604_1620 A0A0A0MT49 A0A0A0MT49|Q9HBD4|P51532|P51532-4|P51532-3|P51532-2|P51532-5 Transcription activator BRG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12546.12546.4 14.38 14.38 2.666 5 3 3 0 1032.1494 3902.6947 Q1596q S1604s S1609s S1620s Hydrogen 1596 (R) qKIEKEDDsEGEEsEEEEEGEEEGsESESR (S) Q(1.0)KIEKEDDS(0.99)EGEES(0.99)EEEEEGEEEGS(0.99)ES(0.0)ES(0.0)R K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S SMARCA4 189484.7 3 18 392.1 331.85 HUMAN 1 0.4622 24.5935 EEGEIDYSAEEGENR-p D6W592;S35-p EEGEIDYSAEEGENR 0.162333856545173 0.887481574249929 0.335666666666667 -0.0236666666666666 15.8132527801712 0.729305596727774 0.335666666666667 -0.0236666666666666 0.0262225379122987 0.845414009512709 3.03241441746223 -0.204508190591266 D6W592 NotFound D6W592.S35.p_NotFound D6W592_S35s _1_1_35_35 D6W592 Q8WVV9|D6W592|Q8WVV9-4|C9IYN3|Q8WVV9-5|B7WPG3|Q8WVV9-2|Q8WVV9-3 Heterogeneous nuclear ribonucleoprotein L-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7905.7905.3 17.91 13.64 4.401 3 1 1 0 764.9969 2213.0156 S35s TMT10 27 (K) TEEGEIDYsAEEGENRR (E) T(0.0)EEGEIDY(0.0)S(0.99)AEEGENRR s:Phosphorylated S HNRPLL 60954 12 2 1148.1 172.52 HUMAN 1 15.8133 -0.7293 EEGFLNNSGEFLFNK-p Q16659;S665-p EEGFLNNSGEFLFNK 0.0777278398719812 0.0101943242483536 -0.511 -0.674666666666667 23.7161795166942 27.9730492873218 -0.511 -0.674666666666667 0.00424993265611615 0.00159475903489788 -4.72580184501079 -5.82992363037639 Q16659 MAPK6 Q16659.S665.p_MAPK6 Q16659_S665s _1_1_665_665 Q16659 Q16659 Mitogen-activated protein kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24609.24609.4 18.22 18.22 99 1 1 1 0 620.0525 2397.2239 S665s TMT10 656 (R) GHEEGFLNNsGEFLFNK (Q) GHEEGFLNNS(1.0)GEFLFNK K:TMT10,s:Phosphorylated S MAPK6 83306.9 1 4 2324.1 87.84 HUMAN 1 -23.7162 -27.973 EEGFNRLSDEFSKSH-p Q9BQ39;S82-p EEGFNRLSDEFSKSH 0.760490754837909 0.002248452490626 -0.0436666666666667 -0.739333333333333 2.28063439063038 41.0199527302499 -0.0428566429073846 -0.739333333333333 0.591475228806398 7.90687234000153e-05 -0.570091101352202 -10.5997739291093 Q9BQ39 DDX50 Q9BQ39.S82.p_DDX50 Q9BQ39_S82s _1_1_82_82 Q9BQ39 Q9BQ39|A0A087WVC1 ATP-dependent RNA helicase DDX50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20058.20058.3 17.33 13.42 2.63 3 1 1 0 866.0825 2516.2669 S82s TMT10 70 (K) LNGDTEEGFNRLsDEFSK (S) LNGDT(0.0)EEGFNRLS(0.99)DEFS(0.0)K K:TMT10,s:Phosphorylated S DDX50 83134.1 5 3 103.2 590.75 HUMAN 1 -2.2806 -41.02 EEGGGDVSPRKEPQE-p Q96JN0-3;S583-p EEGGGDVSPRKEPQE 0.264815877038443 0.583312989164803 -0.186666666666667 0.0813333333333334 10.9436488600849 3.16024623515254 -0.186666666666667 0.0813333333333334 0.080470206164791 0.483031414474229 -2.14623998007196 0.752667428624758 Q96JN0 LCOR Q96JN0.3.S583.p_LCOR Q96JN0-3_S583s _1_1_583_583 Q96JN0-3 Q96JN0-3|A0A1P0AZG4 Isoform 3 of Ligand-dependent corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6076.6076.3 20.81 16.09 12.775 3 1 1 0 626.9532 1798.8769 S583s TMT10 571 (K) EITSHEEGGGDVsPR (K) EIT(0.0)S(0.0)HEEGGGDVS(0.99)PR s:Phosphorylated S LCOR 172300.7 4 8 673.1 247.79 HUMAN 1 -10.9436 3.1602 EEGGRHPSPCQFTIA-p O14686-3;S3133-p EEGGRHPSPCQFTIA 0.634096778246006 0.0412642783359032 0.0636666666666667 0.253 3.68369369686651 18.5592643983952 0.0636666666666666 0.253 0.428184192633829 0.0139339279378051 0.856162931612162 3.57330665888836 O14686 KMT2D O14686.3.S3133.p_KMT2D O14686-3_S3133s _1_1_3133_3133 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14822.14822.4 15.41 12.53 5.469 3 1 1 0 663.0868 2569.3597 S3133s TMT10 3125 (K) VEEGGRHPsPCQFTIATPK (V) VEEGGRHPS(0.99)PCQFT(0.0)IAT(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2D 600227.3 6 34 17.1 1042.08 HUMAN 1 3.6837 18.5593 EEGISQESSEEEQ__-p P17096;S102-p EEGISQESSEEEQ__ 0.233628206047255 0.191939926507772 0.1755 0.136166666666667 12.1192381321569 9.42416595470565 0.1755 0.136166666666667 0.0613869684762892 0.114178255836785 2.35350209901958 1.88110531325454 P17096 HMGA1 P17096.S102.p_HMGA1 P17096_S102sS103s_2_2_102_103 P17096 P17096|P17096-2 High mobility group protein HMG-I/HMG-Y HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12732.12732.2 15.11 15.11 4.732 3 2 2 0 1542.7129 2924.4827 S102s S103s TMT10 89 (K) KLEKEEEEGISQEssEEEQ (-) KLEKEEEEGIS(0.0)QES(0.99)S(0.99)EEEQ K:TMT10,s:Phosphorylated S HMGA1 11675.8 46 10 1152.1 172.09 HUMAN 2 12.1192 9.4242 EEGLLTHSEEELEHS-p Q9UKM9-2;S272-p EEGLLTHSEEELEHS 0.548004512561689 0.0575899883195375 0.115 0.252666666666667 4.82047777933865 16.5129910401492 0.115 0.252666666666667 0.329573452898389 0.022320344634394 1.07105466578213 3.16499438501975 Q9UKM9 RALY Q9UKM9.2.S272.p_RALY Q9UKM9-2_S272s _1_1_272_272 Q9UKM9-2 Q9UKM9|Q9UKM9-2 Isoform 1 of RNA-binding protein Raly HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16693.16693.3 18.44 18.44 1.266 4 1 1 0 1193.824 3499.4942 S272s TMT10 261 (R) DDGDEEGLLTHsEEELEHSQDTDADDGALQ (-) DDGDEEGLLT(0.0)HS(0.99)EEELEHS(0.0)QDT(0.0)DADDGALQ s:Phosphorylated S RALY 30420.5 9 12 967.1 193.88 HUMAN 1 4.8205 16.513 EEGNAYGSEREEEDE-p P78415;S208-p EEGNAYGSEREEEDE 0.290136836578884 0.00474018699637445 -0.215666666666667 0.620333333333333 10.127689750842 33.9830078182881 -0.215666666666667 0.620333333333333 0.0971026371755977 0.000399667853620818 -2.00390352705328 7.72722402649275 P78415 IRX3 P78415.S208.p_IRX3 P78415_S208s _1_1_208_208 P78415 P78415 Iroquois-class homeodomain protein IRX-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4966.4966.4 17.31 17.31 2.062 3 1 1 0 839.5828 3275.3417 S208s Hydrogen 199 (R) TDEEGNAYGsEREEEDEEEDEEDGKR (E) T(0.0)DEEGNAY(0.0)GS(0.99)EREEEDEEEDEEDGKR K:TMT10-Lys-Only,s:Phosphorylated S IRX3 52232 1 1 2172.1 94.55 HUMAN 1 -10.1277 33.983 EEGPPPPSPDGASSD-p Q9NTJ3;S22-p EEGPPPPSPDGASSD 0.232221202833204 0.101587514049587 0.209666666666667 0.385666666666667 12.1960030327242 13.1224572806123 0.209666666666667 0.385666666666667 0.0603114398456525 0.0487252719744324 2.36714904836083 2.53175191478878 Q9NTJ3 SMC4 Q9NTJ3.S22.p_SMC4 Q9NTJ3_S22sS27sS28s_3_3_22_28 Q9NTJ3 Q9NTJ3|E9PD53|Q9NTJ3-2|F8WCB7 Structural maintenance of chromosomes protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7437.7437.4 9.47 9.47 9.473 4 3 3 0 785.8296 2900.3972 S22s S27s S28s TMT10 13 (R) RREEGPPPPsPDGAssDAEPEPPSGR (T) RREEGPPPPS(0.99)PDGAS(0.99)S(0.99)DAEPEPPS(0.0)GR s:Phosphorylated S SMC4 147864 6 8 902.1 203.59 HUMAN 1 12.196 13.1225 EEGPRCGSSEDLHDV-p Q7Z4V5-4;S638-p EEGPRCGSSEDLHDV 0.158312848211182 0.045126199424065 0.363333333333333 0.936666666666667 16.04103571355 18.0058241215693 0.363333333333333 0.936666666666667 0.0248826384173412 0.0158276919033676 3.07607353734387 3.460609808167 Q7Z4V5 HDGFRP2 Q7Z4V5.4.S638.p_HDGFRP2 Q7Z4V5-4_S638s _1_1_638_638 Q7Z4V5-4 Q7Z4V5-4|Q7Z4V5-2 Isoform 4 of Hepatoma-derived growth factor-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3462.3462.2 18.87 18.87 1.595 2 1 1 0 677.7591 1274.543 S638s Hydrogen 636 (R) CGsSEDLHDVR (E) CGS(0.99)S(0.0)EDLHDVR C:Carbamidomethylation,s:Phosphorylated S HDGFL2 74899.1 4 12 712.1 238.42 HUMAN 1 16.041 18.0058 EEGPSGASEEEDT__-p Q96DX7;S339-p EEGPSGASEEEDT__ 0.202255091053404 0.0199261352687015 -0.191666666666667 0.366 13.4689997657104 23.3202689219072 -0.191666666666667 0.366 0.0449883456726476 0.00465557264599489 -2.59593160372536 4.62527568764987 Q96DX7 TRIM44 Q96DX7.S339.p_TRIM44 Q96DX7_S336sS339s_2_2_336_339 Q96DX7 Q96DX7 Tripartite motif-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13354.13354.4 21.69 21.69 2.613 6 2 2 0 939.639 3595.5931 S336s S339s TMT10 315 (K) EQLDTSNESAEPKAEGDEEGPsGAsEEEDT (-) EQLDT(0.0)S(0.0)NES(0.0)AEPKAEGDEEGPS(0.99)GAS(0.99)EEEDT(0.0) K:TMT10,s:Phosphorylated S TRIM44 39042.1 2 2 4999.1 24.01 HUMAN 1 -13.469 23.3203 EEGRNSLSPVQATQK-p E9PDI4;S137-p EEGRNSLSPVQATQK 0.810035198209422 0.00337835803596733 -0.0393333333333333 -0.659 1.75641025866914 36.9669398605811 -0.0393333333333333 -0.659 0.667358158525504 0.000201050896476478 -0.45415509894355 -8.84731754662374 E9PDI4 NotFound E9PDI4.S137.p_NotFound E9PDI4_S137s _1_1_137_137 E9PDI4 E9PDI4|O00515 Ladinin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17381.17381.4 16.93 16.93 2.181 4 1 1 0 616.8625 2384.448 S137s TMT10 134 (R) NSLsPVQATQKPLVSK (K) NS(0.0)LS(0.99)PVQAT(0.0)QKPLVS(0.0)K K:TMT10,s:Phosphorylated S LAD1 58791 8 2 769.1 228.41 HUMAN 1 -1.7564 -36.9669 EEHLANRSQENIDQL-p Q9NWY4;S337-p EEHLANRSQENIDQL 0.89832071009182 0.689003830974529 -0.0313333333333333 -0.046 0.912466600877732 2.21641095525413 -0.0313333333333334 -0.046 0.810500598556744 0.600286953325222 -0.25177513577472 -0.556144546757991 Q9NWY4 C4orf27 Q9NWY4.S337.p_C4orf27 Q9NWY4_S337s _1_1_337_337 Q9NWY4 Q9NWY4 Histone PARylation factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34317.34317.4 15 15 99 1 1 1 0 762.632 2967.5373 S337s TMT10 323 (R) NLFAEIIEEHLANRsQENIDQLAA (-) NLFAEIIEEHLANRS(1.0)QENIDQLAA s:Phosphorylated S HPF1 39834.7 2 1 5963.1 15 HUMAN 1 -0.9125 -2.2164 EEHLDVASPDKASSP-p Q969R5;S683-p EEHLDVASPDKASSP 0.132031969629553 0.0188405856036686 -0.375666666666667 -0.374666666666667 18.1597694841703 23.7332797252319 -0.375666666666667 -0.374666666666667 0.0152764714089449 0.00423323158159751 -3.49467198299219 -4.72443407416347 Q969R5 L3MBTL2 Q969R5.S683.p_L3MBTL2 Q969R5_S683s _1_1_683_683 Q969R5 Q969R5 Lethal(3)malignant brain tumor-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21446.21446.5 19.39 18.28 2.185 5 1 1 0 901.2742 4422.3698 S683s TMT10 674 (R) VKEEHLDVAsPDKASSPELPVSVENIKQETDD (-) VKEEHLDVAS(0.99)PDKAS(0.0)S(0.0)PELPVS(0.0)VENIKQET(0.0)DD K:TMT10,s:Phosphorylated S L3MBTL2 80135.7 5 2 2538.1 79.35 HUMAN 1 -18.1598 -23.7333 EEHNKRLSDTVDKLL-p Q13136;S448-p EEHNKRLSDTVDKLL 0.0211572678163944 0.00949153116870816 -0.737333333333333 -0.630666666666667 39.0410940633221 28.5391690297459 -0.737333333333334 -0.630666666666667 0.000124706931622182 0.00139985514239375 -9.73009330190675 -5.99079269536136 Q13136 PPFIA1 Q13136.S448.p_PPFIA1 Q13136_S448s _1_1_448_448 Q13136 Q13136|Q13136-2|E9PJZ7 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9256.9256.2 9.2 4.88 1.422 2 1 1 0 736.3997 1391.8259 S448s TMT10 446 (K) RLsDTVDK (L) RLS(0.99)DT(0.0)VDK K:TMT10,s:Phosphorylated S PPFIA1 136347 2 26 248.1 410.18 HUMAN 1 -39.0411 -28.5392 EEHPILLTEAPLNPK-p Q6S8J3;T806-p EEHPILLTEAPLNPK 0.115316569267169 0.321845875951341 -0.333 0.153333333333333 19.516294713773 6.50787567676865 -0.333 0.153333333333333 0.0111781653271223 0.223466502741361 -3.77590238829393 1.37421021232545 Q6S8J3 POTEE Q6S8J3.T806.p_POTEE Q6S8J3_T806t_1_1_806_806 Q6S8J3 Q6S8J3|P0CG38|P0CG39|Q9BYX7 POTE ankyrin domain family member E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28983.28983.4 8.41 8.41 8.414 1 1 1 0 655.5946 2538.4241 T806t N811n Hydrogen 796 (R) VAPEEHPILLtEAPLnPKANR (E) VAPEEHPILLT(1.0)EAPLN(0.99)PKAN(0.0)R K:TMT10-Lys-Only,t:Phosphorylated T,n:Deamidated POTEE 122958.9 1 19 1233.99 163.71 HUMAN 1 -19.5163 6.5079 EEHSGNDSDGSEPSE-p O75419-3;S148-p EEHSGNDSDGSEPSE 0.35447381572243 0.808416707294592 -0.133666666666667 0.025 8.37064643965899 1.29337441766101 -0.133666666666667 0.025 0.145524245419336 0.742442044886473 -1.69940474637192 0.345895862503798 O75419 CDC45 O75419.3.S148.p_CDC45 O75419-3_S144sS148s_2_2_144_148 O75419-3 O75419-3|O75419-2 Isoform 3 of Cell division control protein 45 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28750.28750.5 9.2 9.2 1.204 5 2 2 0 1089.2924 5281.4911 S144s N146n S148s TMT10 117 (K) LLIKQDDDLEVPAYEDIFRDEEEDEEHsGnDsDGSEPSEK (R) LLIKQDDDLEVPAY(0.0)EDIFRDEEEDEEHS(0.99)GN(1.0)DS(0.99)DGS(0.0)EPS(0.0)EK K:TMT10,s:Phosphorylated S,n:Deamidated CDC45 69451.6 2 1 6210.1 13.1 HUMAN 2 -8.3706 1.2934 EEIAYKFTPKYILRA-p Q03252;T518-p EEIAYKFTPKYILRA 0.0930004911854097 0.015902984410004 -0.621 0.535 21.9411258328727 24.852664537557 -0.621 0.535 0.00639569016852301 0.00327139922338216 -4.30847925203434 5.00036456553897 Q03252 LMNB2 Q03252.T518.p_LMNB2 Q03252_T518t _1_1_518_518 Q03252 Q03252 Lamin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22607.22607.3 19.36 13.71 7.803 2 1 1 0 840.4658 2439.4102 T518t TMT10 506 (R) QVLEGEEIAYKFtPK (Y) QVLEGEEIAY(0.0)KFT(0.99)PK K:TMT10,t:Phosphorylated T LMNB2 70061.3 1 32 440.2 312.01 HUMAN 1 -21.9411 24.8527 EEIFDDASPGKQKEI-p O60264;S66-p EEIFDDASPGKQKEI 0.378491308323597 0.0989828254601126 -0.137666666666667 0.191333333333333 7.79481544880537 13.2750974693816 -0.137666666666667 0.191333333333333 0.166156928379409 0.0470424847789956 -1.59954520100842 2.55931833028133 O60264 SMARCA5 O60264.S66.p_SMARCA5 O60264_S66s _1_1_66_66 O60264 O60264 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32556.32763.3 34.05 28.27 5.337 3 1 1 0 1271.2639 3731.8111 S66s TMT10 35 (K) GGPEGVAAQAVASAASAGPADAEMEEIFDDAsPGK (Q) GGPEGVAAQAVAS(0.0)AAS(0.0)AGPADAEMEEIFDDAS(0.99)PGK K:TMT10,s:Phosphorylated S SMARCA5 122587.8 23 5 1232.1 163.75 HUMAN 1 -7.7948 13.2751 EEIGIEGSDDDALVT-p Q9Y5B6;S295-p EEIGIEGSDDDALVT 0.445575262346696 0.0463462978252902 0.108666666666667 0.275 6.47364060604609 17.8510315802758 0.108666666666667 0.275 0.225235031915266 0.0164020012996457 1.36852422088998 3.42940117317981 Q9Y5B6 PAXBP1 Q9Y5B6.S295.p_PAXBP1 Q9Y5B6_S295s _1_1_295_295 Q9Y5B6 Q9Y5B6|Q9Y5B6-2|Q9Y5B6-4|Q9Y5B6-3 PAX3- and PAX7-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26687.26687.5 30.33 26.63 12.838 3 1 1 0 886.0317 4346.1676 S295s TMT10 286 (K) IAEEIGIEGsDDDALVTGEQDEELSRWEQEQIRK (G) IAEEIGIEGS(0.99)DDDALVT(0.0)GEQDEELS(0.0)RWEQEQIRK K:TMT10,s:Phosphorylated S PAXBP1 105258.2 9 6 978.1 192.69 HUMAN 1 6.4736 17.851 EEIHRKLSEATRELQ-p A8K070;S139-p EEIHRKLSEATRELQ 0.747383984515188 0.361255462794964 0.0583333333333333 0.213333333333333 2.40191792435737 5.86639598886707 0.0583333333333333 0.213333333333333 0.575185868575582 0.259036164603477 0.59607822946905 1.26043273654297 A8K070 NotFound A8K070.S139.p_NotFound A8K070_S139s _1_1_139_139 A8K070 Q13098-7|A8K070 COP9 signalosome complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6988.6988.2 7.05 7.05 7.049 2 1 1 0 671.8778 1262.7833 S139s TMT10 137 (R) KLsEATR (E) KLS(0.99)EAT(0.0)R K:TMT10,s:Phosphorylated S GPS1 59605.7 1 1 2547.1 79 HUMAN 1 2.4019 5.8664 EEIKKQQSPKDKLNN-p Q6P4F7;S728-p EEIKKQQSPKDKLNN 0.0973600331101722 0.00137406073843988 0.679666666666667 -2.298 21.4349174419497 46.4503458096005 0.679666666666667 -2.298 0.00718634819278336 2.26446399110322e-05 4.19389168795503 -13.4511964173067 Q6P4F7 ARHGAP11A Q6P4F7.S728.p_ARHGAP11A Q6P4F7_S728s _1_1_728_728 Q6P4F7 Q6P4F7 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10695.10695.5 8.28 3.73 1.799 3 1 1 0 676.1729 3296.8711 S728s TMT10 715 (K) QEFSSDEEIKKQQsPKDK (L) QEFS(0.0)S(0.0)DEEIKKQQS(0.99)PKDK K:TMT10,s:Phosphorylated S ARHGAP11A 114948.2 1 12 414.1 321.53 HUMAN 1 21.4349 -46.4503 EEILRGLTPRKNDIG-p O15042;T550-p EEILRGLTPRKNDIG 0.998180995519267 0.011831190253862 0.000333333333333324 -0.392666666666667 0.0131016946378025 26.9313158772636 0.000333333333333322 -0.392666666666667 0.996987769221693 0.00202706844107161 0.00395279372256304 -5.54252059613332 O15042 U2SURP O15042.T550.p_U2SURP O15042_T550t _1_1_550_550 O15042 O15042|O15042-2|E7ET15 U2 snRNP-associated SURP motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24841.24841.4 12.53 7.9 99 1 1 1 0 520.2995 1998.2112 T550t TMT10 540 (R) DKLEEILRGLtPR (K) DKLEEILRGLT(1.0)PR K:TMT10,t:Phosphorylated T U2SURP 118746.2 2 11 360.1 345.29 HUMAN 1 0.0131 -26.9313 EEKAGKESDEKEQEQ-p F8VU11;S831-p EEKAGKESDEKEQEQ 0.147946322560902 0.00338010316755577 -1.03866666666667 1.191 16.8378307693481 36.9555955099619 -1.03866666666667 1.191 0.0207117560916873 0.000201576754717526 -3.23076204590465 8.84280268409073 F8VU11 PRPF40B F8VU11.S831.p_PRPF40B F8VU11_S831s _1_1_831_831 F8VU11 F8VU11|Q6NWY9|Q6NWY9-3|Q6NWY9-2 PRP40 pre-mRNA processing factor 40 homolog B (Yeast), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5869.5869.4 13.75 13.75 99 1 1 1 0 655.094 2537.3865 S831s TMT10 827 (K) AGKEsDEKEQEQDK (D) AGKES(1.0)DEKEQEQDK K:TMT10,s:Phosphorylated S PRPF40B 101691.8 2 2 1236.1 163.46 HUMAN 1 -16.8378 36.9556 EEKALLSSPEGEEKV-p O75592;S3894-p EEKALLSSPEGEEKV 0.494009291446194 0.137817739623936 -0.103 0.192 5.64020268254486 11.3425453566245 -0.103 0.192 0.272885042607699 0.0734083503036647 -1.22019286324461 2.215198041035 O75592 MYCBP2 O75592.S3894.p_MYCBP2 O75592_S3894s _1_1_3894_3894 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15570.15570.2 12.04 7.97 1.164 2 1 1 0 849.4434 1617.91 S3894s TMT10 3890 (K) ALLSsPEGEEK (V) ALLS(0.0)S(0.99)PEGEEK K:TMT10,s:Phosphorylated S MYCBP2 518176.7 4 23 252.1 405.77 HUMAN 1 -5.6402 11.3425 EEKDEYSSSETTGEK-p Q8NFC6;S2844-p EEKDEYSSSETTGEK 0.0813263831752068 0.0682125737107759 0.439333333333333 0.283 23.2816899083571 15.5132381184877 0.439333333333333 0.283 0.00469711300961996 0.0280980504635757 4.62133624597997 2.97325297773521 Q8NFC6 BOD1L1 Q8NFC6.S2844.p_BOD1L1 Q8NFC6_S2843sS2844s_2_2_2843_2844 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16056.16056.4 11 11 1.234 7 2 2 0 1045.9919 4020.9889 S2843s S2844s TMT10 2835 (R) VMEEKDEYssSETTGEKPEQNDDDTIK (S) VMEEKDEY(0.0)S(0.99)S(0.99)S(0.0)ET(0.0)T(0.0)GEKPEQNDDDT(0.0)IK K:TMT10,s:Phosphorylated S BOD1L1 332628.7 2 30 97.1 603.4 HUMAN 1 23.2817 15.5132 EEKDGPISPKKKKPK-p Q8WWQ0;S911-p EEKDGPISPKKKKPK 0.181524191967561 0.00320981770772267 0.638666666666667 -1.234 14.5946919710517 37.3770903912844 0.638666666666667 -1.234 0.0347160897847804 0.000182932538448471 2.80277530546954 -9.01193449273213 Q8WWQ0 PHIP Q8WWQ0.S911.p_PHIP Q8WWQ0_S911s _1_1_911_911 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11119.11119.4 12.65 10.85 99 1 1 1 0 520.7881 2000.1631 S911s TMT10 902 (K) VNEEKDGPIsPK (K) VNEEKDGPIS(1.0)PK K:TMT10,s:Phosphorylated S PHIP 208454.1 19 7 108.1 577.05 HUMAN 1 14.5947 -37.3771 EEKEEEESDEDFAHH-p Q641Q2;S230-p EEKEEEESDEDFAHH 0.150283451076775 0.241465571012327 -0.410666666666667 0.357666666666667 16.5825068641512 8.12990398908106 -0.410666666666667 0.357666666666667 0.0219659157524108 0.153818864517278 -3.18085222772649 1.65715397342867 Q641Q2 FAM21A Q641Q2.S230.p_FAM21A Q641Q2_S230sS238s_2_2_230_238 Q641Q2 Q641Q2|Q641Q2-2|E7ESD2|F8W7U3|A0A087WYF6 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4879.4879.3 12.73 12.73 99 2 2 2 0 902.6718 2546.0501 S230s S238s TMT10 226 (K) EEEEsDEDFAHHsDNEQNR (H) EEEES(1.0)DEDFAHHS(1.0)DNEQNR s:Phosphorylated S WASHC2A 147352.2 1 68 12.1 1178.3 HUMAN 1 -16.5825 8.1299 EEKENNKSFQSDDSS-p Q6P0N0;S172-p EEKENNKSFQSDDSS 0.656580005233 0.0217672324909033 0.062 -0.401333333333333 3.42897374430289 22.7221419626807 0.062 -0.401333333333333 0.45404889759351 0.00534300774516601 0.806272626485198 -4.48410368763642 Q6P0N0 MIS18BP1 Q6P0N0.S172.p_MIS18BP1 Q6P0N0_S172s _1_1_172_172 Q6P0N0 Q6P0N0|G5E9K5|Q6P0N0-2 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10295.10295.2 9.31 9.31 2.151 4 1 1 0 725.8247 1370.6749 S172s TMT10 172 (K) sFQSDDSSLR (A) S(0.99)FQS(0.0)DDS(0.0)S(0.0)LR s:Phosphorylated S MIS18BP1 129996 2 10 54.1 728.39 HUMAN 1 3.429 -22.7221 EEKESEDSDEENDFT-p Q8IWA0;S782-p EEKESEDSDEENDFT 0.125733230663643 0.487106478870755 -0.359 0.0653333333333334 18.7377899112277 4.17362906893559 -0.359 0.0653333333333334 0.013372758720717 0.38250497939208 -3.61314949974293 0.950010746869054 Q8IWA0 WDR75 Q8IWA0.S782.p_WDR75 Q8IWA0_S782s _1_1_782_782 Q8IWA0 Q8IWA0 WD repeat-containing protein 75 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20299.20299.4 21.82 18.4 3.595 3 1 1 0 971.9327 3804.726 S782s TMT10 766 (K) EIPEDVDMEEEKESEDsDEENDFTEK (V) EIPEDVDMEEEKES(0.0)EDS(0.99)DEENDFT(0.0)EK K:TMT10,s:Phosphorylated S WDR75 95980.4 3 4 1418.1 144.36 HUMAN 1 -18.7378 4.1736 EEKGAPESGEEGLAP-p O95201;S292-p EEKGAPESGEEGLAP 0.651183474642633 0.161298297753186 -0.078 0.144333333333333 3.49150649658336 10.4196863951098 -0.078 0.144333333333333 0.447558026681046 0.0907886086442148 -0.818590821948807 2.05385793274842 O95201 ZNF205 O95201.S292.p_ZNF205 O95201_S292s _1_1_292_292 O95201 O95201 Zinc finger protein 205 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11524.11524.3 16.26 16.26 16.264 2 1 1 0 808.4001 2343.2192 S292s TMT10 288 (K) GAPEsGEEGLAPDSEVGRK (S) GAPES(0.99)GEEGLAPDS(0.0)EVGRK K:TMT10,s:Phosphorylated S ZNF205 61826.9 2 1 4499.1 30.65 HUMAN 1 -3.4915 10.4197 EEKGGLVSDAYGEDD-p Q9UHR5;S43-p EEKGGLVSDAYGEDD 0.606672106590353 0.188411674756143 0.0766666666666667 0.218 4.01475598260121 9.53204998856792 0.0766666666666667 0.218 0.396756820913613 0.11137686802569 0.919949176826518 1.89978507136313 Q9UHR5 SAP30BP Q9UHR5.S43.p_SAP30BP Q9UHR5_S43s _1_1_43_43 Q9UHR5 Q9UHR5|Q9UHR5-2|X6R3T8|J3KRU5|F5H478 SAP30-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18560.18560.3 16.08 16.08 3.555 3 1 1 0 632.9458 1816.8551 S43s TMT10 39 (K) GGLVsDAYGEDDFSR (L) GGLVS(0.99)DAY(0.0)GEDDFS(0.0)R s:Phosphorylated S SAP30BP 33983.9 2 2 1421.1 144.21 HUMAN 1 4.0148 9.532 EEKHIAFTPESQRRS-p Q5H9R7-5;T631-p EEKHIAFTPESQRRS 0.0576023956717159 0.0893004313342526 0.512 0.249666666666667 27.1079334006644 13.8825263234055 0.512 0.249666666666667 0.00194628600555232 0.0409022658980725 5.59823682766207 2.66979008883867 Q5H9R7 PPP6R3 Q5H9R7.5.T631.p_PPP6R3 Q5H9R7-5_T631t _1_1_631_631 Q5H9R7-5 Q5H9R7-5|Q5H9R7-2 Isoform 5 of Serine/threonine-protein phosphatase 6 regulatory subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9971.9971.3 16.24 16.24 5.084 2 1 1 0 498.9151 1414.764 T631t TMT10 627 (K) HIAFtPESQR (R) HIAFT(0.99)PES(0.0)QR t:Phosphorylated T PPP6R3 99453.3 2 4 896.1 204.08 HUMAN 1 27.1079 13.8825 EEKILYLTPEQEKDK-p B7Z7P8;T333-p EEKILYLTPEQEKDK 0.551931763784542 0.406773372904139 -0.103666666666667 0.0903333333333333 4.76359164197318 5.19988330802557 -0.103666666666667 0.0903333333333334 0.333918772933541 0.302003286554157 -1.06055141447959 1.1403264324114 B7Z7P8 ETF1 B7Z7P8.T333.p_ETF1 B7Z7P8_T333t _1_1_333_333 B7Z7P8 P62495|B7Z7P8|P62495-2 Eukaryotic peptide chain release factor subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23434.23434.3 11 11 5.549 2 1 1 0 591.3276 1691.9984 T333t TMT10 329 (K) ILYLtPEQEK (D) ILY(0.0)LT(0.99)PEQEK K:TMT10,t:Phosphorylated T ETF1 47760.5 1 3 4209.1 35.37 HUMAN 1 -4.7636 5.1999 EEKKRISSKSPGHMV-p Q9NWH9;S551-p EEKKRISSKSPGHMV 0.213504219163969 0.157866320995109 -0.304666666666667 0.151333333333333 12.9292576495667 10.5459661918354 -0.304666666666667 0.151333333333333 0.050941793969965 0.0881867587796972 -2.49832731106483 2.07585235430883 Q9NWH9 SLTM Q9NWH9.S551.p_SLTM Q9NWH9_S550sS551s_2_2_550_551 Q9NWH9 Q9NWH9|Q9NWH9-3 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16498.16498.2 10.61 10.61 1.204 4 2 2 0 1180.0961 2199.2571 S550s S551s Hydrogen 549 (R) IssKSPGHMVILDQTK (G) IS(0.99)S(0.99)KS(0.0)PGHMVILDQT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S SLTM 117431.6 29 23 167.1 494.15 HUMAN 1 -12.9293 10.546 EEKLDLVTNKQHSPI-p Q8N9N5;T85-p EEKLDLVTNKQHSPI 0.169212674234468 0.0132337093750666 0.463 -0.466666666666667 15.3914967411574 26.1407683120451 0.463 -0.466666666666667 0.0288968381765253 0.00243177376498175 2.95220431408156 -5.3315688517887 Q8N9N5 BANP Q8N9N5.T85.p_BANP Q8N9N5_T85t_1_1_85_85 Q8N9N5 Q8N9N5|Q8N9N5-7 Protein BANP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25650.25650.4 8.38 8.38 1.823 5 1 1 0 994.0314 3892.1392 T85t N109n TMT10 81 (K) LDLVtNKQHSPIQVPMVAGSPLGATQTCnK (V) LDLVT(0.99)N(0.0)KQHS(0.0)PIQVPMVAGS(0.0)PLGAT(0.0)QT(0.0)CN(0.99)K K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,n:Deamidated BANP 57178.1 1 1 3183.1 58.32 HUMAN 1 15.3915 -26.1408 EEKPKGRSPLSWGSL-p P0CK96;S25-p EEKPKGRSPLSWGSL 0.954578198037871 0.00549189207634702 -0.00966666666666668 -0.502666666666667 0.395905838791923 32.7853122853306 -0.00966666666666669 -0.502666666666667 0.912871011455824 0.000526585348699635 -0.114631017954332 -7.31337697070905 P0CK96 SLC35E2B P0CK96.S25.p_SLC35E2B P0CK96_S25s _1_1_25_25 P0CK96 P0CK96|P0CK97|P0CK97-2|A0A087WUK8 Solute carrier family 35 member E2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21075.21075.3 10.27 10.27 10.268 3 1 1 0 622.6531 1785.971 S25s TMT10 23 (K) GRsPLSWGSLFGHR (S) GRS(0.99)PLS(0.0)WGS(0.0)LFGHR s:Phosphorylated S SLC35E2B 44118.8 1 1 6664.1 10.27 HUMAN 1 -0.3959 -32.7853 EEKPKRGSIGENQIK-p Q05682-4;S202-p EEKPKRGSIGENQIK 0.0871905809717546 0.0385442470422474 -0.742333333333333 0.307666666666667 22.5669154686947 18.9935358518266 -0.742333333333334 0.307666666666667 0.00553743259964115 0.0126080062321389 -4.45278645006635 3.6629943545598 Q05682 CALD1 Q05682.4.S202.p_CALD1 Q05682-4_S202s _1_1_202_202 Q05682-4 Q05682-4|E9PGZ1|Q05682-5 Isoform 4 of Caldesmon HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8738.8738.4 14.95 14.95 99 1 1 1 0 561.0608 2161.2544 S202s TMT10 200 (K) RGsIGENQIKDEK (I) RGS(1.0)IGENQIKDEK K:TMT10,s:Phosphorylated S CALD1 62719.3 2 1 4568.1 29.68 HUMAN 1 -22.5669 18.9935 EEKPLQKSPLHIKDD-p Q5UIP0;S1454-p EEKPLQKSPLHIKDD 0.166583585489166 0.0137719194356848 -0.392666666666667 -0.556666666666667 15.5655518944581 25.848022988233 -0.392666666666667 -0.556666666666667 0.027761620334725 0.00260134348709102 -2.98520922835581 -5.25496062056381 Q5UIP0 RIF1 Q5UIP0.S1454.p_RIF1 Q5UIP0_S1454s _1_1_1454_1454 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20213.20213.5 14.39 9.93 99 1 1 1 0 565.7421 2744.7208 S1454s TMT10 1450 (K) PLQKsPLHIKDDVLPK (Q) PLQKS(1.0)PLHIKDDVLPK K:TMT10,s:Phosphorylated S RIF1 276628.8 4 15 29.1 922.06 HUMAN 1 -15.5656 -25.848 EEKPVEVSPAVTKGL-p Q8N0X7;S470-p EEKPVEVSPAVTKGL 0.681351208373412 0.0234393081433852 -0.0576666666666667 -0.318666666666667 3.12646052527161 22.2349504080089 -0.0576666666666667 -0.318666666666667 0.486803786314111 0.00597729870113929 -0.7459828718883 -4.37117808528467 Q8N0X7 SPG20 Q8N0X7.S470.p_SPG20 Q8N0X7_S470s _1_1_470_470 Q8N0X7 Q8N0X7 Spartin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17142.17142.4 7.32 7.32 3.206 2 1 1 0 630.3599 2438.4473 S470s TMT10 460 (R) IQPEEKPVEVsPAVTK (G) IQPEEKPVEVS(0.99)PAVT(0.0)K K:TMT10,s:Phosphorylated S SPART 73402.2 2 2 4996.1 24.06 HUMAN 1 -3.1265 -22.235 EEKQFNKSGDLSMNL-p O43295;S195-p EEKQFNKSGDLSMNL 0.0866557243462627 0.3459130778099 -0.514333333333333 -0.181666666666667 22.7134833562331 6.1098781387179 -0.514333333333333 -0.181666666666667 0.00535367082093381 0.244913196253686 -4.48701982126796 -1.30379839648913 O43295 SRGAP3 O43295.S195.p_SRGAP3 O43295_S195s _1_1_195_195 O43295 O43295|O43295-2|O43295-3|A0A087WZH4 SLIT-ROBO Rho GTPase-activating protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21989.21989.3 13.63 13.63 2.218 2 1 1 0 721.0484 2081.1578 S195s TMT10 191 (K) QFNKsGDLSMNLLR (H) QFNKS(0.99)GDLS(0.0)MNLLR K:TMT10,s:Phosphorylated S SRGAP3 125471.5 1 1 754.1 231.27 HUMAN 1 -22.7135 -6.1099 EEKRAFDSAVAKALE-p Q16891-2;S436-p EEKRAFDSAVAKALE 0.327537851293798 0.0271768380068364 0.167 0.285333333333333 9.06630224962923 21.2417251929094 0.167 0.285333333333333 0.123985179478182 0.00751324378373692 1.81984087480535 4.14646044248004 Q16891 IMMT Q16891.2.S436.p_IMMT Q16891-2_S436s _1_1_436_436 Q16891-2 Q16891|Q16891-4|Q16891-2|Q16891-3|B9A067|C9J406 Isoform 2 of MICOS complex subunit MIC60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10881.10881.3 9.88 4.12 99 1 1 1 0 501.6094 1422.8469 S436s TMT10 432 (K) RAFDsAVAK (A) RAFDS(1.0)AVAK K:TMT10,s:Phosphorylated S IMMT 83022.6 2 11 1057.1 182.65 HUMAN 1 9.0663 21.2417 EEKSENSSEDGDITD-p Q5C9Z4;S321-p EEKSENSSEDGDITD 0.567656016658623 0.034743893649904 -0.0951666666666667 0.353 4.52732137148869 19.651208536882 -0.0951666666666667 0.353 0.352588272331194 0.0108362532524709 -1.01667793014652 3.80101473298708 Q5C9Z4 NOM1 Q5C9Z4.S321.p_NOM1 Q5C9Z4_S320sS321s_2_2_320_321 Q5C9Z4 Q5C9Z4 Nucleolar MIF4G domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11746.11746.3 16.24 16.24 2.152 4 2 2 0 955.0693 2703.2521 S320s S321s Hydrogen 310 (R) FAEDEEKSENssEDGDITDK (S) FAEDEEKS(0.0)ENS(0.99)S(0.99)EDGDIT(0.0)DK K:TMT10-Lys-Only,s:Phosphorylated S NOM1 96826.2 3 6 2040.1 101.14 HUMAN 2 -4.5273 19.6512 EEKSSSPSPLPTLGP-p O75420;S370-p EEKSSSPSPLPTLGP 0.844695210620492 0.223829526024521 0.0276666666666667 0.148333333333333 1.41552880455091 8.56438656606968 0.0276666666666667 0.148333333333333 0.721850263836262 0.139175036344932 0.375089925771371 1.73236443174419 O75420 GIGYF1 O75420.S370.p_GIGYF1 O75420_S370s _1_1_370_370 O75420 O75420 GRB10-interacting GYF protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26172.26172.4 16.58 16.58 1.169 7 1 1 0 1062.0131 4165.0613 S370s TMT10 366 (K) SSSPsPLPTLGPLWGTNGDGDETAEKEPPAAEDDIR (G) S(0.0)S(0.0)S(0.0)PS(0.99)PLPT(0.0)LGPLWGT(0.0)NGDGDET(0.0)AEKEPPAAEDDIR K:TMT10,s:Phosphorylated S GIGYF1 115112.8 3 5 1679.1 121.41 HUMAN 1 1.4155 8.5644 EEKTWKGSIGLLLGK-p Q8IY63;S828-p EEKTWKGSIGLLLGK 0.424570213789118 0.0114866088005294 0.180333333333333 0.575 6.85789079271432 27.1450695173511 0.180333333333333 0.575 0.206163092788002 0.00192971444707731 1.4361140958359 5.60060389263575 Q8IY63 AMOTL1 Q8IY63.S828.p_AMOTL1 Q8IY63_S828s _1_1_828_828 Q8IY63 Q8IY63|Q8IY63-2 Angiomotin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28072.28072.3 13.23 13.23 3.258 2 1 1 0 680.7468 1960.2562 S828s TMT10 824 (K) TWKGsIGLLLGK (E) T(0.0)WKGS(0.99)IGLLLGK K:TMT10,s:Phosphorylated S AMOTL1 106914.7 3 5 1931.1 106.33 HUMAN 1 6.8579 27.1451 EEKVKELSPEEERRK-p O15488;S468-p EEKVKELSPEEERRK 0.180052462758709 0.0289925422877345 -0.317333333333333 -0.34 14.6890933350301 20.8180885655812 -0.317333333333333 -0.34 0.0339696182651458 0.00828306641163998 -2.82034120953138 -4.05277045153017 O15488 GYG2 O15488.S468.p_GYG2 O15488_S468s _1_1_468_468 O15488 O15488|O15488-2|O15488-6|O15488-3|O15488-4|A0A1W2PQ75 Glycogenin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16206.16206.5 12.43 10.29 9.812 2 1 1 0 681.7517 3324.7614 S468s TMT10 466 (K) ELsPEEERRKWEEGRIDYMGK (D) ELS(0.99)PEEERRKWEEGRIDY(0.0)MGK K:TMT10,s:Phosphorylated S GYG2 55753.4 2 1 5636.1 17.54 HUMAN 1 -14.6891 -20.8181 EEKWNSVSPASAGKR-p Q86UE4;S308-p EEKWNSVSPASAGKR 0.344499746607644 0.00190088044114978 -0.141 -0.798333333333333 8.59513523199121 42.6736019164083 -0.141 -0.798333333333333 0.138193137421454 5.40306022433434e-05 -1.73827849790681 -11.4018229015011 Q86UE4 MTDH Q86UE4.S308.p_MTDH Q86UE4_S308s_1_1_308_308 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19421.20083.4 21.16 21.16 2.914 6 1 1 0 751.1431 2920.5983 N305n S308s TMT10 293 (K) LSSQISAGEEKWnSVsPASAGK (R) LS(0.0)S(0.0)QIS(0.0)AGEEKWN(1.0)S(0.0)VS(0.99)PAS(0.0)AGK K:TMT10,n:Deamidated,s:Phosphorylated S MTDH 63892.9 12 13 77.1 644.48 HUMAN 1 -8.5951 -42.6736 EEKYGGDSDHPSDGE-p Q8WYQ5;S271-p EEKYGGDSDHPSDGE 0.218214377394343 0.0991813122596961 0.182666666666667 0.240333333333333 12.7409168053158 13.2625961691312 0.182666666666667 0.240333333333333 0.0531995941884786 0.047178093101183 2.46448464569961 2.55705780215685 Q8WYQ5 DGCR8 Q8WYQ5.S271.p_DGCR8 Q8WYQ5_S271sS275s_2_2_271_275 Q8WYQ5 Q8WYQ5|Q8WYQ5-3|Q8WYQ5-2 Microprocessor complex subunit DGCR8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16981.16981.2 15.03 15.03 2.348 6 2 2 0 1429.0959 2697.2537 S271s S275s TMT10 267 (K) YGGDsDHPsDGETSVQPMMTK (I) Y(0.0)GGDS(0.99)DHPS(0.99)DGET(0.0)S(0.0)VQPMMT(0.0)K K:TMT10,s:Phosphorylated S DGCR8 86842.3 7 9 1117.1 175.44 HUMAN 1 12.7409 13.2626 EELEEMDSQDAEMTN-p Q96JH7;S1207-p EELEEMDSQDAEMTN 0.79879406065728 0.0432276990659245 -0.0643333333333333 0.494666666666667 1.88071085237682 18.2781700569937 -0.0643333333333334 0.494666666666667 0.648528273876625 0.0148656188798124 -0.482219492676609 3.51584733236104 Q96JH7 VCPIP1 Q96JH7.S1207.p_VCPIP1 Q96JH7_S1207s _1_1_1207_1207 Q96JH7 Q96JH7 Deubiquitinating protein VCIP135 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20901.20901.3 22.55 22.55 1.612 6 1 1 0 1112.442 3255.3449 S1207s TMT10 1196 (R) GNSVEELEEMDsQDAEMTNTTEPMDHS (-) GNS(0.0)VEELEEMDS(0.99)QDAEMT(0.0)NT(0.0)T(0.0)EPMDHS(0.0) s:Phosphorylated S VCPIP1 135687.4 5 11 725.1 236.71 HUMAN 1 -1.8807 18.2782 EELEETES_______-p Q9Y6N7-2;S1655-p EELEETES_______ 0.295154464069677 0.244411945828562 0.199666666666667 -0.174333333333333 9.98527922282898 8.06388534299178 0.199666666666667 -0.174333333333333 0.100339533534383 0.156174982409058 1.97915305876486 -1.6457152123083 Q9Y6N7 ROBO1 Q9Y6N7.2.S1655.p_ROBO1 Q9Y6N7-2_S1655s _1_1_1655_1655 Q9Y6N7-2 Q9Y6N7-2|Q9Y6N7-3|Q9Y6N7-4|Q9Y6N7-5|A0A087WTM1|Q9Y6N7-6|A0A0A0MSX4|A0A087WZ85 Isoform 2 of Roundabout homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23107.23107.3 19.72 19.72 3.114 3 1 1 0 1088.8058 3184.4426 S1655s TMT10 1630 (R) NIAEMQVLGGYERGEDNNEELEETEs (-) NIAEMQVLGGY(0.0)ERGEDNNEELEET(0.0)ES(0.99) s:Phosphorylated S ROBO1 182465.9 2 12 832.1 215.62 HUMAN 1 9.9853 -8.0639 EELKVKASPITNDGE-p Q02880;S1400-p EELKVKASPITNDGE 0.566006108525713 0.00949153116870816 -0.087 0.739666666666667 4.55219958077628 28.5525810962111 -0.087 0.739666666666667 0.350574272861403 0.00139553871885763 -1.02131727480004 5.99464497397913 Q02880 TOP2B Q02880.S1400.p_TOP2B Q02880_S1400s _1_1_1400_1400 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21054.21054.3 15.15 10.79 1.367 3 1 1 0 1034.1959 3020.6031 S1400s TMT10 1397 (K) VKAsPITNDGEDEFVPSDGLDK (D) VKAS(0.99)PIT(0.0)NDGEDEFVPS(0.0)DGLDK K:TMT10,s:Phosphorylated S TOP2B 184233.7 4 33 71.1 658.36 HUMAN 1 -4.5522 28.5526 EELLKYRSLYGDLDS-p O94964-2;S421-p EELLKYRSLYGDLDS 0.920202571641394 0.744473421606947 -0.017 0.0416666666666667 0.705730614982908 1.76872441761799 -0.017 0.0416666666666667 0.850015682750804 0.665468584739091 -0.198342792442029 0.456901739479709 O94964 SOGA1 O94964.2.S421.p_SOGA1 O94964-2_S421s _1_1_421_421 O94964-2 O94964-2|O94964-4|X6R3R3 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25022.25022.3 13.78 13.78 2.229 6 1 1 0 982.4667 2865.4216 S421s TMT10 419 (K) YRsLYGDLDSALSAEELADAPHSR (E) Y(0.0)RS(0.99)LY(0.0)GDLDS(0.0)ALS(0.0)AEELADAPHS(0.0)R s:Phosphorylated S SOGA1 185623.3 2 5 215.1 433.51 HUMAN 1 -0.7057 1.7687 EELMKIGSDVELLLR-p Q5U5X0;S60-p EELMKIGSDVELLLR 0.842855371536824 0.777290843147008 -0.0376666666666667 -0.0393333333333333 1.43622089233513 1.51465570844197 -0.0376666666666667 -0.0393333333333333 0.718419167383501 0.705560775912646 -0.379983699517317 -0.3983762318027 Q5U5X0 LYRM7 Q5U5X0.S60.p_LYRM7 Q5U5X0_S60s _1_1_60_60 Q5U5X0 Q5U5X0 Complex III assembly factor LYRM7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30865.30865.2 14.42 8.52 99 1 1 1 0 712.3919 1343.8096 S60s TMT10 58 (K) IGsDVELLLR (T) IGS(1.0)DVELLLR s:Phosphorylated S LYRM7 12011.7 1 1 6050.1 14.42 HUMAN 1 -1.4362 -1.5147 EELNKTASGNVEAKV-p Q9BTC8;S35-p EELNKTASGNVEAKV 0.260386657049657 0.0656181623147116 0.264666666666667 0.309333333333333 11.0810763817077 15.7421732116162 0.264666666666667 0.309333333333333 0.0779636856662281 0.0266552450103583 2.17031934899942 3.01675071446818 Q9BTC8 MTA3 Q9BTC8.S35.p_MTA3 Q9BTC8_S35s _1_1_35_35 Q9BTC8 Q9BTC8|E7EV10|Q9BTC8-2|E7EQY4 Metastasis-associated protein MTA3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7153.7153.2 10.9 10.9 2.498 2 1 1 0 707.872 1334.768 S35s TMT10 33 (K) TAsGNVEAK (V) T(0.0)AS(0.99)GNVEAK K:TMT10,s:Phosphorylated S MTA3 68244.2 1 1 1441.1 142.09 HUMAN 1 11.0811 15.7422 EELNSQDSPPKQDST-p O14745;S302-p EELNSQDSPPKQDST 0.218214377394343 0.132128437682719 0.213666666666667 0.166 12.7408305595276 11.5871445724164 0.213666666666667 0.166 0.0532006506804867 0.0693881874034805 2.46446917277205 2.25823077733483 O14745 SLC9A3R1 O14745.S302.p_SLC9A3R1 O14745_S302s_1_1_302_302 O14745 O14745|O14745-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.31829.32251.5 11.29 9 1.111 16 1 1 0 1066.3152 5230.5676 S302s N324n M329m TMT10 288 (R) SASSDTSEELNSQDsPPKQDSTAPSSTSSSDPILDFnISLAmAK (E) S(0.0)AS(0.0)S(0.0)DT(0.0)S(0.0)EELN(0.0)S(0.0)QDS(0.99)PPKQDS(0.0)T(0.0)APS(0.0)S(0.0)T(0.0)S(0.0)S(0.0)S(0.0)DPILDFN(0.99)IS(0.0)LAM(1.0)AK K:TMT10,s:Phosphorylated S,n:Deamidated,m:Oxidized methionine SLC9A3R1 39153 14 13 534.1 279.04 HUMAN 1 12.7408 11.5871 EELPLNESADITFAT-p Q14966;S1697-p EELPLNESADITFAT 1 0.0316359987498557 -9.25185853854297e-18 -0.384666666666667 4.82163733276644e-16 20.2570178529059 -1.20185167898973e-17 -0.384666666666667 1 0.00942536581007187 -1.58259021767868e-16 -3.93058906403854 Q14966 ZNF638 Q14966.S1697.p_ZNF638 Q14966_S1697s _1_1_1697_1697 Q14966 Q14966|Q14966-3|Q14966-5 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36580.36580.4 25.5 25.92 1.891 5 1 1 0 925.4835 3618.9406 S1697s TMT10 1680 (R) LVTVDEIGEVEELPLNEsADITFATLNTK (G) LVT(0.0)VDEIGEVEELPLNES(0.99)ADIT(0.0)FAT(0.0)LNT(0.0)K K:TMT10,s:Phosphorylated S ZNF638 222047.2 2 23 165.1 494.68 HUMAN 1 0 -20.257 EELQEKGSPAGPPPS-p Q96RY5;S645-p EELQEKGSPAGPPPS 0.313089580774833 0.851954222339686 0.171333333333333 -0.0196666666666666 9.43609867603221 0.97847486466691 0.171333333333333 -0.0196666666666666 0.113864969040115 0.798274972573891 1.88388476721756 -0.268443960365384 Q96RY5 CRAMP1 Q96RY5.S645.p_CRAMP1 Q96RY5_S645s _1_1_645_645 Q96RY5 Q96RY5 Protein cramped-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16237.16237.5 25.18 23.09 12.793 2 1 1 0 795.6195 3894.0964 S645s TMT10 631 (K) DLADAPAEELQEKGsPAGPPPSQGQPAARPPK (E) DLADAPAEELQEKGS(0.99)PAGPPPS(0.0)QGQPAARPPK K:TMT10,s:Phosphorylated S CRAMP1 135914.1 2 6 647.1 254.68 HUMAN 1 9.4361 -0.9785 EELQRDRSPAAETPP-p Q8TE68;S182-p EELQRDRSPAAETPP 0.924065631945411 0.552327857837129 -0.0196666666666667 0.0853333333333334 0.676490446981927 3.47214307275874 -0.0196666666666667 0.0853333333333333 0.855757975365729 0.449557960946297 -0.190637323804707 0.814656414559489 Q8TE68 EPS8L1 Q8TE68.S182.p_EPS8L1 Q8TE68_S182s _1_1_182_182 Q8TE68 Q8TE68|B4DKV7|Q8TE68-2|Q8TE68-3|K7EN83|K7EKX9 Epidermal growth factor receptor kinase substrate 8-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7275.7275.3 16.64 16.64 9.397 2 1 1 0 582.9633 1666.9074 S182s TMT10 180 (R) DRsPAAETPPLQR (R) DRS(0.99)PAAET(0.0)PPLQR s:Phosphorylated S EPS8L1 80534.9 7 3 326.1 361.27 HUMAN 1 -0.6765 3.4721 EEMPQVHTPKTADSQ-p P25205-2;T767-p EEMPQVHTPKTADSQ 0.380643803112374 0.0296143813579828 -0.130666666666667 0.407 7.7509771138574 20.6893870110893 -0.130666666666667 0.407 0.167842634854159 0.00853220534110097 -1.59192980505086 4.02455446063366 P25205 MCM3 P25205.2.T767.p_MCM3 P25205-2_T767t _1_1_767_767 P25205-2 P25205-2|J3KQ69 Isoform 2 of DNA replication licensing factor MCM3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16990.16990.5 24.08 17.04 2.237 7 1 1 0 874.0084 4286.0439 T767t TMT10 739 (K) TRQPDAKDGDSYDPYDFSDTEEEMPQVHtPK (T) T(0.0)RQPDAKDGDS(0.0)Y(0.0)DPY(0.0)DFS(0.0)DT(0.0)EEEMPQVHT(0.99)PK K:TMT10,t:Phosphorylated T MCM3 96534.2 2 7 136.1 528.96 HUMAN 1 -7.751 20.6894 EENDLDDSLSVKNGD-p Q6ULP2;S409-p EENDLDDSLSVKNGD 0.421140316027267 0.0995900681155624 -0.117 0.243 6.91568285434448 13.2401772457519 -0.117 0.243 0.203437829925122 0.0474222630728813 -1.44624572157402 2.55300520703059 Q6ULP2 AFTPH Q6ULP2.S409.p_AFTPH Q6ULP2_S409s _1_1_409_409 Q6ULP2 Q6ULP2|Q6ULP2-4|Q6ULP2-2|Q6ULP2-3|Q6ULP2-5 Aftiphilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24005.24005.4 17.73 14.67 1.7 5 1 1 0 905.952 3540.8313 S409s TMT10 389 (R) KFTNFQSPNIDPTEENDLDDsLSVK (N) KFT(0.0)NFQS(0.0)PNIDPT(0.0)EENDLDDS(0.99)LS(0.0)VK K:TMT10,s:Phosphorylated S AFTPH 102996.9 6 4 973.1 193.16 HUMAN 1 -6.9157 13.2402 EENDSENSEFEDDGS-p O43719;S600-p EENDSENSEFEDDGS 0.290216881946097 0.00546352537340617 -0.249333333333333 0.997666666666667 10.1252956452611 32.8229084934566 -0.249333333333333 0.997666666666667 0.0971561810413873 0.000522046454589894 -2.00348725063288 7.32607618449546 O43719 HTATSF1 O43719.S600.p_HTATSF1 O43719_S600s _1_1_600_600 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13777.13777.3 19.2 19.2 4.408 3 1 1 0 914.0552 2660.1735 S600s TMT10 591 (K) ELEENDSENsEFEDDGSEK (V) ELEENDS(0.0)ENS(0.99)EFEDDGS(0.0)EK K:TMT10,s:Phosphorylated S HTATSF1 86421.8 2 11 149.1 512 HUMAN 1 -10.1253 32.8229 EENEDARSMAAAAAS-p B1ALM5;S140-p EENEDARSMAAAAAS 0.826817782780066 0.0101156916870805 -0.036 -0.439666666666667 1.59061952191534 28.0182467284215 -0.036 -0.439666666666667 0.693326895746666 0.0015782482889369 -0.416104091934128 -5.84264360901227 B1ALM5 TMEM9 B1ALM5.S140.p_TMEM9 B1ALM5_S140s _1_1_140_140 B1ALM5 B1ALM5 Transmembrane protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15756.15756.3 11.77 11.77 11.772 2 1 1 0 490.2445 1388.7518 S140s TMT10 140 (R) sMAAAAASLGGPR (A) S(0.99)MAAAAAS(0.0)LGGPR s:Phosphorylated S TMEM9 21471.5 1 1 6427.1 11.77 HUMAN 1 -1.5906 -28.0182 EENIDSNSESEREEI-p P29374;S455-p EENIDSNSESEREEI 0.719908473757462 0.0241060436278219 0.0826666666666667 0.792666666666667 2.69423982902567 22.0474955784815 0.0826666666666667 0.792666666666667 0.537744549451573 0.00624094624864456 0.657594009343505 4.32820909790673 P29374 ARID4A P29374.S455.p_ARID4A P29374_S453sS455s_2_2_453_455 P29374 P29374|P29374-2|P29374-3 AT-rich interactive domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17458.17458.3 10.06 10.06 2.89 4 2 2 0 1027.7916 2921.4264 S453s S455s TMT10 445 (K) SEPEENIDsNsESEREEIELK (S) S(0.0)EPEENIDS(0.99)NS(0.99)ES(0.0)EREEIELK K:TMT10,s:Phosphorylated S ARID4A 143719.1 2 13 532.1 280.77 HUMAN 1 2.6942 22.0475 EENPDADSDFDAKSS-p Q9H0G5;S248-p EENPDADSDFDAKSS 0.148266672319898 0.0272679844954057 -0.419 0.422 16.7854110873025 21.2193459921864 -0.419 0.422 0.0209632634030165 0.00755205946218839 -3.22048831473994 4.14147954870572 Q9H0G5 NSRP1 Q9H0G5.S248.p_NSRP1 Q9H0G5_S248s _1_1_248_248 Q9H0G5 Q9H0G5|A0A024QZ33 Nuclear speckle splicing regulatory protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21058.21058.4 20.36 20.36 12.117 2 1 1 0 819.9056 3196.6287 S248s TMT10 232 (K) CILQTDVKVEENPDADsDFDAK (S) CILQT(0.0)DVKVEENPDADS(0.99)DFDAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NSRP1 66617.1 4 2 900.1 203.68 HUMAN 1 -16.7854 21.2193 EENRNNAYPHKAGFA-p Q8NBF2;Y403-p EENRNNAYPHKAGFA 0.190846171157164 0.188825389402314 -0.247666666666667 -0.215666666666667 14.065553783694 9.52050668980692 -0.247666666666667 -0.215666666666667 0.039214313963635 0.111673295134891 -2.7049622284688 -1.89778605208614 Q8NBF2 NHLRC2 Q8NBF2.Y403.p_NHLRC2 Q8NBF2_Y403y _1_1_403_403 Q8NBF2 Q8NBF2|Q8NBF2-2 NHL repeat-containing protein 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8662.8713.4 20.11 13.34 12.245 2 1 1 0 611.5441 2363.1893 Y403y TMT10 390 (R) FAGSGNEENRNNAyPHK (A) FAGS(0.0)GNEENRNNAY(0.99)PHK K:TMT10,y:Phosphorylated Y NHLRC2 80297.9 4 1 171.1 20.11 HUMAN 1 -14.0656 -9.5205 EENRQKLSLSTKLKQ-p P35579;S1326-p EENRQKLSLSTKLKQ 0.738774155064327 0.483558395864161 -0.136 0.118666666666667 2.49518935783352 4.2119297581142 -0.136 0.118666666666667 0.56296457089873 0.37914647636993 -0.615872593513697 0.957261021218895 P35579 MYH9 P35579.S1326.p_MYH9 P35579_S1326s _1_1_1326_1326 P35579 P35579 Myosin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12917.12917.3 11.75 11.75 1.103 3 1 1 0 558.0049 1592.035 S1326s TMT10 1323 (R) QKLsLSTK (L) QKLS(0.99)LS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S MYH9 227783.5 1 31 296.1 379.15 HUMAN 1 -2.4952 4.2119 EENRRPPSGDNAREK-p Q14241;S311-p EENRRPPSGDNAREK 0.265419473261086 0.559175814734798 0.421333333333333 0.0713333333333334 10.9225040330082 3.40280280231455 0.421333333333334 0.0713333333333334 0.0808629529246506 0.456793294197608 2.14253814177461 0.800981765831815 Q14241 TCEB3 Q14241.S311.p_TCEB3 Q14241_S311s _1_1_311_311 Q14241 Q14241|A0A024RAC6 Elongin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3439.3439.3 7.41 4.29 99 1 1 1 0 426.8769 1198.649 S311s TMT10 308 (R) RPPsGDNAR (E) RPPS(1.0)GDNAR s:Phosphorylated S ELOA 90363.7 1 3 2069.1 99.52 HUMAN 1 10.9225 3.4028 EENTDQASPQEDYAG-p Q9NU22;S4538-p EENTDQASPQEDYAG 0.158669507635931 0.0750138141120757 0.254 0.421666666666667 16.0164021410265 14.930946719496 0.254 0.421666666666667 0.0250241760015847 0.032129600684235 3.07134029960126 2.86365206923826 Q9NU22 MDN1 Q9NU22.S4538.p_MDN1 Q9NU22_S4538s _1_1_4538_4538 Q9NU22 Q9NU22 Midasin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13109.13109.2 18.53 16.67 5.237 3 1 1 0 1233.5193 2386.0632 S4538s TMT10 4530 (K) AEENTDQAsPQEDYAGFER (L) AEENT(0.0)DQAS(0.99)PQEDY(0.0)AGFER s:Phosphorylated S MDN1 638399.7 4 4 905.1 202.58 HUMAN 1 16.0164 14.9309 EENVSDGSPNAGSVE-p P46527;S178-p EENVSDGSPNAGSVE 0.877182701795958 0.100699648610277 -0.025 0.198666666666667 1.11773900829654 13.1716098719652 -0.025 0.198666666666667 0.773082957058854 0.0481769179085164 -0.303156738420795 2.54062058117953 P46527 CDKN1B P46527.S178.p_CDKN1B P46527_S178s _1_1_178_178 P46527 P46527 Cyclin-dependent kinase inhibitor 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7767.7767.4 19.88 19.88 2.44 5 1 1 0 869.9461 3396.7872 S178s Hydrogen 167 (R) ANRTEENVSDGsPNAGSVEQTPKKPGLR (R) ANRT(0.0)EENVS(0.0)DGS(0.99)PNAGS(0.0)VEQT(0.0)PKKPGLR K:TMT10-Lys-Only,s:Phosphorylated S CDKN1B 22301.1 6 2 2263.1 90.79 HUMAN 1 -1.1177 13.1716 EENVVCESPVEIIKS-p O75363;S399-p EENVVCESPVEIIKS 0.302596403273957 0.165383055715122 -0.159666666666667 -0.142 9.72709823132742 10.2771696766895 -0.159666666666667 -0.142 0.106485427034282 0.0938173220880113 -1.93433467436897 -2.02906182441811 O75363 BCAS1 O75363.S399.p_BCAS1 O75363_S399s_1_1_399_399 O75363 O75363 Breast carcinoma-amplified sequence 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21883.21883.4 9.62 9.62 9.618 4 1 1 0 871.7073 3402.8281 N394n S399s TMT10 381 (K) SVKEDSVPTGAEEnVVCEsPVEIIK (S) S(0.0)VKEDS(0.0)VPT(0.0)GAEEN(1.0)VVCES(0.99)PVEIIK K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S BCAS1 61993.1 1 2 3655.1 46.01 HUMAN 1 -9.7271 -10.2772 EEPDQNLSSPEEVFH-p Q5T9C2;S216-p EEPDQNLSSPEEVFH 0.318436709095685 0.515901623576143 0.187666666666667 -0.09 9.29941103855143 3.85909319703118 0.187666666666667 -0.0899999999999999 0.117505689757845 0.411235577759268 1.86020562952357 -0.889950617830538 Q5T9C2 FAM102A Q5T9C2.S216.p_FAM102A Q5T9C2_S216sS217s_2_2_216_217 Q5T9C2 Q5T9C2|Q5T9C2-2|Q5T9C2-3 Protein FAM102A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20561.20561.5 16.02 16.02 6.823 7 2 2 0 753.351 3602.8037 S216s S217s TMT10 198 (K) ARPTILSSGLPEEPDQNLssPEEVFHSGHSR (N) ARPT(0.0)ILS(0.0)S(0.0)GLPEEPDQNLS(0.99)S(0.99)PEEVFHS(0.0)GHS(0.0)R s:Phosphorylated S FAM102A 42240.5 1 8 2072.1 99.26 HUMAN 1 9.2994 -3.8591 EEPEDAPSPELDGD_-p Q96F63;S337-p EEPEDAPSPELDGD_ 0.670948364346811 0.108217443680189 0.107666666666667 0.724 3.2460117030987 12.7599417665879 0.107666666666667 0.724 0.473585971933473 0.0529670546057971 0.76995206983199 2.46657482426024 Q96F63 CCDC97 Q96F63.S337.p_CCDC97 Q96F63_S337s _1_1_337_337 Q96F63 Q96F63 Coiled-coil domain-containing protein 97 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.17536.17536.3 17.57 14.38 17.567 2 1 1 0 1007.7359 2941.222 S337s TMT10 321 (R) DEEERYFDEEEPEDAPsPELDGD (-) DEEERY(0.0)FDEEEPEDAPS(0.99)PELDGD s:Phosphorylated S CCDC97 39288.2 4 3 1741.1 118.22 HUMAN 1 3.246 12.7599 EEPMQSDSEDGEEEE-p P31323;S85-p EEPMQSDSEDGEEEE 0.300634445803794 0.0326902581920266 0.168666666666667 0.282333333333333 9.80285230749272 20.046037591345 0.168666666666667 0.282333333333333 0.104644105324099 0.0098945544063677 1.94747864462234 3.88519128212778 P31323 PRKAR2B P31323.S85.p_PRKAR2B P31323_S83sS85s_2_2_83_85 P31323 P31323 cAMP-dependent protein kinase type II-beta regulatory subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26567.26567.4 26.25 26.25 99 2 2 2 0 1042.9349 3992.793 M81m S83s S85s TMT10 73 (K) GVNFAEEPmQsDsEDGEEEEAAPADAGAFNAPVINR (F) GVNFAEEPM(1.0)QS(1.0)DS(1.0)EDGEEEEAAPADAGAFNAPVINR m:Oxidized methionine,s:Phosphorylated S PRKAR2B 46700.6 4 3 3065.1 61.65 HUMAN 1 9.8029 20.046 EEPNWMGSPRLLNRD-p B0QY95;S79-p EEPNWMGSPRLLNRD 0.6525879959072 0.069642075985999 0.115 -0.284333333333333 3.47582837624041 15.3890754826462 0.115 -0.284333333333333 0.449176640241784 0.0289129530998513 0.81550684463878 -2.94975973528012 B0QY95 MIEF1 B0QY95.S79.p_MIEF1 B0QY95_S79s _1_1_79_79 B0QY95 B0QY95|Q9NQG6|Q9NQG6-2 Mitochondrial dynamics protein MID51 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21168.21168.2 14.51 10.55 9.154 2 1 1 0 892.8866 1704.8002 S79s TMT10 70 (R) SWEEPNWMGsPR (L) S(0.0)WEEPNWMGS(0.99)PR s:Phosphorylated S MIEF1 53787.3 2 2 2809.1 69.8 HUMAN 1 3.4758 -15.3891 EEPPDHQYYNDFPGK-p P29353-7;Y239-p EEPPDHQYYNDFPGK 0.72370254925658 0.874067257969815 0.0603333333333333 0.0163333333333333 2.65813236775313 0.82266717668455 0.0603333333333333 0.0163333333333333 0.542234021622265 0.82743384731114 0.650076610862035 0.228763045875068 P29353 SHC1 P29353.7.Y239.p_SHC1 P29353-7_Y239yY240y_2_2_239_240 P29353-7 P29353-6|P29353-7|P29353-2|P29353-3 Isoform 7 of SHC-transforming protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28720.28720.5 11.2 11.2 1.701 3 2 2 0 1006.8404 4869.2125 Y239y Y240y N241n TMT10 219 (R) MAGFDGSAWDEEEEEPPDHQyynDFPGKEPPLGGVVDMR (L) MAGFDGS(0.0)AWDEEEEEPPDHQY(0.99)Y(0.99)N(1.0)DFPGKEPPLGGVVDMR K:TMT10,y:Phosphorylated Y,n:Deamidated SHC1 52137.1 1 6 2336.1 87.32 HUMAN 1 2.6581 0.8227 EEPRKMRSPPGENPS-p Q96IT1-2;S23-p EEPRKMRSPPGENPS 0.318436709095685 0.0978159790989977 0.178333333333333 -0.277666666666667 9.30277704282132 13.3492915231963 0.178333333333333 -0.277666666666667 0.117414652124715 0.0462456457068663 1.86078863069791 -2.57274486973914 Q96IT1 ZNF496 Q96IT1.2.S23.p_ZNF496 Q96IT1-2_S23s _1_1_23_23 Q96IT1-2 Q96IT1-2 Isoform 2 of Zinc finger protein 496 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12158.12158.3 13.29 13.29 2.884 5 1 1 0 882.4119 2565.2565 S23s TMT10 21 (K) MRsPPGENPSPQGELPSPESSR (R) MRS(0.99)PPGENPS(0.0)PQGELPS(0.0)PES(0.0)S(0.0)R s:Phosphorylated S ZNF496 71998.2 1 1 4228.1 35.1 HUMAN 1 9.3028 -13.3493 EEPSPRSSPLLLRRL-p Q2M3V2;S252-p EEPSPRSSPLLLRRL 0.191102046396083 0.392878219062441 0.219 0.142666666666667 14.0378984686618 5.39314935928 0.219 0.142666666666667 0.0394648224367608 0.28885844172359 2.6998793690893 1.17538803806277 Q2M3V2 NotFound Q2M3V2.S252.p_NotFound Q2M3V2_S252s _1_1_252_252 Q2M3V2 Q2M3V2 Ankyrin repeat domain-containing protein SOWAHA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16142.16142.2 12.31 3.53 1.317 2 1 1 0 547.8126 1014.6509 S252s TMT10 251 (R) SsPLLLR (R) S(0.0)S(0.99)PLLLR s:Phosphorylated S SOWAHA 57612.8 2 2 2717.1 72.95 HUMAN 1 14.0379 5.3931 EEPTKGNSGSEACTS-p Q9H2Y7;S1302-p EEPTKGNSGSEACTS 0.286012107084712 0.00463993929332692 -0.158666666666667 -0.695666666666667 10.2572155638572 34.1384533404735 -0.158666666666667 -0.695666666666667 0.0942493673355787 0.000385615663105991 -2.02643516149535 -7.78237171425924 Q9H2Y7 ZNF106 Q9H2Y7.S1302.p_ZNF106 Q9H2Y7_S1302s _1_1_1302_1302 Q9H2Y7 Q9H2Y7 Zinc finger protein 106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13499.13499.3 15.65 15.65 1.145 6 1 1 0 927.7658 2701.3139 S1302s TMT10 1293 (K) EGEEPTKGNsGSEACTSSFLR (L) EGEEPT(0.0)KGNS(0.99)GS(0.0)EACT(0.0)S(0.0)S(0.0)FLR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF106 210818.9 4 9 170.1 490.3 HUMAN 1 -10.2572 -34.1385 EEPTTLPSGEAKPRK-p Q641Q2;S314-p EEPTTLPSGEAKPRK 0.97158608608734 0.0174017151144664 -0.00800000000000002 -0.390666666666667 0.243712543564607 24.2478605961033 -0.00800000000000001 -0.390666666666667 0.945428621136503 0.00376022593398979 -0.071683609879687 -4.84995341501267 Q641Q2 FAM21A Q641Q2.S314.p_FAM21A Q641Q2_S314s _1_1_314_314 Q641Q2 Q641Q2|Q641Q2-2|E7ESD2|F8W7U3 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13577.13577.5 16.55 16.55 4.613 3 1 1 0 658.7612 3209.8097 S314s TMT10 297 (R) IKGDAVGRVDEEPTTLPsGEAKPR (K) IKGDAVGRVDEEPT(0.0)T(0.0)LPS(0.99)GEAKPR K:TMT10,s:Phosphorylated S WASHC2A 147352.2 2 23 12.1 1178.3 HUMAN 1 -0.2437 -24.2479 EEQAEAISERSWQAD-p Q9ULE0;S809-p EEQAEAISERSWQAD 0.737835772695866 0.101978792811225 0.1 0.231333333333333 2.503553868824 13.0971905556915 0.1 0.231333333333333 0.561881344711511 0.0490095759034511 0.617639900714781 2.5271959916925 Q9ULE0 WWC3 Q9ULE0.S809.p_WWC3 Q9ULE0_S809s _1_1_809_809 Q9ULE0 Q9ULE0 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23300.23300.5 11.23 10.22 11.231 3 1 1 0 782.1985 3826.9988 S809s TMT10 786 (R) AKLEYTEEEVLEMERKEEQAEAIsER (S) AKLEY(0.0)T(0.0)EEEVLEMERKEEQAEAIS(0.99)ER K:TMT10,s:Phosphorylated S WWC3 123814.7 1 19 161.1 495.35 HUMAN 1 2.5036 13.0972 EEQAFKRSRNTDEMV-p P61978-2;S36-p EEQAFKRSRNTDEMV 0.379392937735762 0.125220856961881 0.15 0.192 7.77481083928161 11.898124947134 0.15 0.192 0.166924051084211 0.0645933048417542 1.59607037781943 2.31313510305446 P61978 HNRNPK P61978.2.S36.p_HNRNPK P61978-2_S36s _1_1_36_36 P61978-2 P61978-2|P61978-3|S4R457 Isoform 2 of Heterogeneous nuclear ribonucleoprotein K HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10399.10399.2 7.15 1.62 1.427 2 1 1 0 829.8916 1578.8107 S36s TMT10 36 (R) sRNTDEMVELR (I) S(0.99)RNT(0.0)DEMVELR s:Phosphorylated S HNRNPK 51312.6 5 1 595.1 264.01 HUMAN 1 7.7748 11.8981 EEQDGGSSDEDRAGP-p Q14147;S750-p EEQDGGSSDEDRAGP 0.902738973298693 0.722920944129696 0.02 0.0343333333333333 0.873494881831146 1.93944952303732 0.02 0.0343333333333333 0.817806412951454 0.639815928294835 0.241837818866241 0.495293681834562 Q14147 DHX34 Q14147.S750.p_DHX34 Q14147_S749sS750s_2_2_749_750 Q14147 Q14147 Probable ATP-dependent RNA helicase DHX34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20525.20525.5 16.44 12.93 6.424 3 2 2 0 772.349 3697.7829 S749s S750s TMT10 741 (R) LQEEQDGGssDEDRAGPAPPGASDGVDIQDVK (F) LQEEQDGGS(0.99)S(0.99)DEDRAGPAPPGAS(0.0)DGVDIQDVK K:TMT10,s:Phosphorylated S DHX34 129258.4 2 1 4717.1 27.53 HUMAN 1 0.8735 1.9394 EEQDRPRSPTGPSNS-p Q96I25;S222-p EEQDRPRSPTGPSNS 0.753636807176205 0.230341680762996 0.0433333333333333 0.126666666666667 2.34633380746838 8.3983185833659 0.0433333333333333 0.126666666666667 0.582594820493659 0.144599949625729 0.584203925579873 1.70362911795595 Q96I25 RBM17 Q96I25.S222.p_RBM17 Q96I25_S222s _1_1_222_222 Q96I25 Q96I25 Splicing factor 45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.39423.39423.5 22.08 22.08 1.5 6 1 1 0 846.8324 4150.1544 S222s TMT10 207 (K) AAIPPPVYEEQDRPRsPTGPSNSFLANMGGTVAHK (I) AAIPPPVY(0.0)EEQDRPRS(0.99)PT(0.0)GPS(0.0)NS(0.0)FLANMGGT(0.0)VAHK K:TMT10,s:Phosphorylated S RBM17 45188.9 33 6 851.1 212.17 HUMAN 1 2.3463 8.3983 EEQEREGSENNQPQV-p E7ESJ3;S555-p EEQEREGSENNQPQV 0.513238302111037 0.00827523544649006 0.169666666666667 0.675666666666667 5.35465488801313 29.6191707257582 0.169666666666667 0.675666666666667 0.291430171047238 0.00109164876409735 1.16867161381184 6.30725634653782 E7ESJ3 NotFound E7ESJ3.S555.p_NotFound E7ESJ3_S546sS555s_2_2_546_555 E7ESJ3 E7ESJ3 Ankyrin repeat domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10211.10211.4 21.37 16.93 99 2 2 2 0 964.9059 3696.6695 S546s S555s TMT10 537 (K) AAEHDLEVAsEEEQEREGsENNQPQVEEER (K) AAEHDLEVAS(1.0)EEEQEREGS(1.0)ENNQPQVEEER s:Phosphorylated S ANKRD26 199524.4 1 15 812.1 221.02 HUMAN 1 5.3547 29.6192 EEQGVEDSANEDSVD-p P55210;S16-p EEQGVEDSANEDSVD 0.388754166810574 0.384411710787912 0.119666666666667 0.104333333333333 7.5902014528286 5.51760962769431 0.119666666666667 0.104333333333333 0.174172607941472 0.280697818364672 1.56397953274215 1.19786026439197 P55210 CASP7 P55210.S16.p_CASP7 P55210_S16s _1_1_16_16 P55210 P55210|P55210-2 Caspase-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12490.12490.3 21.96 21.96 7.439 2 1 1 0 1100.7958 3220.4022 S16s Acetyl 2 (M) ADDQGCIEEQGVEDsANEDSVDAKPDR (S) ADDQGCIEEQGVEDS(0.99)ANEDS(0.0)VDAKPDR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CASP7 34903.8 1 1 3253.1 55.79 HUMAN 1 7.5902 5.5176 EEQHPLGTPTPGRKR-p Q9UIF8;T1283-p EEQHPLGTPTPGRKR 0.670988086279107 0.230248275437608 -0.0753333333333333 0.144 3.24521242215938 8.4016677019559 -0.0753333333333334 0.144 0.473673139302807 0.144488482472167 -0.769792456342888 1.70420874238125 Q9UIF8 BAZ2B Q9UIF8.T1283.p_BAZ2B Q9UIF8_T1283t _1_1_1283_1283 Q9UIF8 Q9UIF8|Q9UIF8-3|Q9UIF8-5|Q9UIF8-2|Q9UIF8-4 Bromodomain adjacent to zinc finger domain protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13974.13974.5 18.22 18.22 1.732 4 1 1 0 580.8983 2820.4892 T1283t TMT10 1267 (R) DTSGGIDLGEEQHPLGtPTPGRK (R) DT(0.0)S(0.0)GGIDLGEEQHPLGT(0.99)PT(0.0)PGRK K:TMT10,t:Phosphorylated T BAZ2B 242223.6 2 2 1765.1 116.68 HUMAN 1 -3.2452 8.4017 EEQKASETPPPVAQP-p Q6P1N0;T120-p EEQKASETPPPVAQP 0.995519005138801 0.750394183054612 0.000999999999999982 0.035 0.0367064011001617 1.7236186747496 0.000999999999999997 0.035 0.9915836562087 0.672416145055221 0.0110445620036527 0.446637245771777 Q6P1N0 CC2D1A Q6P1N0.T120.p_CC2D1A Q6P1N0_T120t _1_1_120_120 Q6P1N0 Q6P1N0|Q6P1N0-2 Coiled-coil and C2 domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14869.14869.5 18.53 15.3 2.516 4 1 1 0 683.9581 3335.8 T120t TMT10 117 (K) ASEtPPPVAQPKPEAPHPGLETTLQER (L) AS(0.0)ET(0.99)PPPVAQPKPEAPHPGLET(0.0)T(0.0)LQER K:TMT10,t:Phosphorylated T CC2D1A 104460 2 1 1492.1 137.02 HUMAN 1 0.0367 1.7236 EEQKLEKSPLAGNKD-p O75151;S625-p EEQKLEKSPLAGNKD 0.0166133832515298 0.00122180865858234 -0.976333333333333 -0.985 41.6033183146698 47.8982866512736 -0.976333333333333 -0.985 6.91302565393217e-05 1.62245004895277e-05 -10.9030867824038 -14.3256405714844 O75151 PHF2 O75151.S625.p_PHF2 O75151_S625s _1_1_625_625 O75151 O75151 Lysine-specific demethylase PHF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14411.14411.3 10.79 7.14 99 1 1 1 0 943.1871 2747.5783 S625s TMT10 616 (K) MEEEQKLEKsPLAGNK (D) MEEEQKLEKS(1.0)PLAGNK K:TMT10,s:Phosphorylated S PHF2 121742.7 4 4 376.2 336.84 HUMAN 1 -41.6033 -47.8983 EEQQDSGSEPRGDED-p Q9UJV9;S68-p EEQQDSGSEPRGDED 0.114016248333261 0.163458677376817 0.459333333333333 0.192 19.6550752865418 10.3414021826414 0.459333333333333 0.192 0.010826609466399 0.0924399669929486 3.80531372371494 2.04023414630393 Q9UJV9 DDX41 Q9UJV9.S68.p_DDX41 Q9UJV9_S66sS68s_2_2_66_68 Q9UJV9 Q9UJV9|D6RGI7 Probable ATP-dependent RNA helicase DDX41 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20006.20006.5 23.57 23.57 11.708 4 2 2 0 969.647 4684.2763 S66s S68s TMT10 57 (K) GAAEEEQQDsGsEPRGDEDDIPLGPQSNVSLLDQHQHLK (E) GAAEEEQQDS(0.99)GS(0.99)EPRGDEDDIPLGPQS(0.0)NVS(0.0)LLDQHQHLK K:TMT10,s:Phosphorylated S DDX41 70521.1 3 7 1480.1 138.65 HUMAN 1 19.6551 10.3414 EEQQLEESGPHDLTE-p P38398;S1542-p EEQQLEESGPHDLTE 0.736926628232361 0.00457579421824357 -0.094 -0.542666666666667 2.51104472938292 34.2514212694908 -0.094 -0.542666666666667 0.560913027780724 0.00037571442809083 -0.619221540203926 -7.82266126420806 P38398 BRCA1 P38398.S1542.p_BRCA1 P38398_S1542s _1_1_1542_1542 P38398 P38398-7|P38398-4|P38398-8|P38398-3|P38398-5|P38398-6|K7EPC7 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22919.22919.3 25.32 25.32 7.438 5 1 1 0 1060.508 3099.532 S1542s TMT10 1531 (K) VVDVEEQQLEEsGPHDLTETSYLPR (Q) VVDVEEQQLEES(0.99)GPHDLT(0.0)ET(0.0)S(0.0)Y(0.0)LPR s:Phosphorylated S BRCA1 210227.6 3 21 106.1 588.91 HUMAN 1 -2.511 -34.2514 EEQQRCISELKAETR-p Q14980;S737-p EEQQRCISELKAETR 0.146674740935683 0.179844070644604 0.361333333333333 -0.153 16.9503620284625 9.79967329862406 0.361333333333333 -0.153 0.0201819811940334 0.104720732206699 3.25286455776293 -1.94615765151088 Q14980 NUMA1 Q14980.S737.p_NUMA1 Q14980_S737s _1_1_737_737 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-3|Q14980-4 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15758.15758.3 7.62 7.62 4.651 2 1 1 0 582.3068 1664.9406 S737s TMT10 735 (R) CIsELKAETR (S) CIS(0.99)ELKAET(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NUMA1 239339.3 1 7 31.1 900.97 HUMAN 1 16.9504 -9.7997 EEQRRQFSPGPRTTM-p F5GXV7;S1321-p EEQRRQFSPGPRTTM 0.466045817432459 0.171388475129943 -0.148666666666667 -0.470666666666667 6.12059696594574 10.0706386095127 -0.148666666666667 -0.470666666666667 0.244309471039203 0.0983866422215835 -1.30601858008278 -1.99317307726302 F5GXV7 NotFound F5GXV7.S1321.p_NotFound F5GXV7_S1321s _1_1_1321_1321 F5GXV7 F5GXV7|Q8NFP9|A0A0D9SF28|Q5T321 Neurobeachin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4653.4653.3 8.89 8.89 99 1 1 1 0 418.5499 1173.669 S1321s TMT10 1318 (R) RQFsPGPR (T) RQFS(1.0)PGPR s:Phosphorylated S NBEA 330412.2 1 3 2242.1 92.01 HUMAN 1 -6.1206 -10.0706 EEQSEASSEQLDQFT-p Q9Y6X4;S619-p EEQSEASSEQLDQFT 0.917020843028829 0.00701753853914177 -0.0206666666666667 0.488 0.733311821183209 30.8645003768035 -0.0206666666666667 0.488 0.844634502348665 0.000819501895298111 -0.205576276244973 6.68851716422974 Q9Y6X4 FAM169A Q9Y6X4.S619.p_FAM169A Q9Y6X4_S619s _1_1_619_619 Q9Y6X4 Q9Y6X4|D6RB01 Soluble lamin-associated protein of 75 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17414.17414.3 22.61 22.61 1.119 6 1 1 0 1046.8109 3058.4489 S619s TMT10 609 (K) NQSEEQSEASsEQLDQFTQSAEK (A) NQS(0.0)EEQS(0.0)EAS(0.0)S(0.99)EQLDQFT(0.0)QS(0.0)AEK K:TMT10,s:Phosphorylated S FAM169A 75295.8 2 11 731.1 236 HUMAN 1 -0.7333 30.8645 EEQTQPPSPAGAGMS-p Q16666;S153-p EEQTQPPSPAGAGMS 0.303412321511454 0.114525838397893 0.165333333333333 0.185666666666667 9.70770754806971 12.4124180320609 0.165333333333333 0.185666666666667 0.1069619335821 0.0573796898943872 1.93097100873107 2.40445844517902 Q16666 IFI16 Q16666.S153.p_IFI16 Q16666_S153s _1_1_153_153 Q16666 Q16666|Q16666-2|Q16666-3 Gamma-interferon-inducible protein 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14565.14565.3 10.52 10.52 4.628 5 1 1 0 833.3831 2418.1591 S153s TMT10 144 (K) VSEEQTQPPsPAGAGMSTAMGR (S) VS(0.0)EEQT(0.0)QPPS(0.99)PAGAGMS(0.0)T(0.0)AMGR s:Phosphorylated S IFI16 88710.4 1 1 6621.1 10.52 HUMAN 1 9.7077 12.4124 EERARIYSSDSDEGS-p Q8WVC0;S607-p EERARIYSSDSDEGS 0.607175432428294 0.0238126241601899 -0.076 0.361666666666667 4.00970205865289 22.1293996486855 -0.076 0.361666666666667 0.397218799146698 0.00612435046443771 -0.918983711691716 4.34695092424491 Q8WVC0 LEO1 Q8WVC0.S607.p_LEO1 Q8WVC0_S607sS608sS610s_3_3_607_610 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7839.8254.2 12.31 12.31 3.357 5 3 3 0 1015.3421 1789.7813 S607s S608s S610s Hydrogen 605 (R) IYssDsDEGSEEDK (A) IY(0.0)S(0.99)S(0.99)DS(0.99)DEGS(0.0)EEDK K:TMT10-Lys-Only,s:Phosphorylated S LEO1 75516.9 3 24 514.1 286.88 HUMAN 1 -4.0097 22.1294 EERARQPSPFVDDCK-p Q5T481;S1060-p EERARQPSPFVDDCK 0.796323249979386 0.0151683676631791 0.0366666666666667 0.356 1.90801822701003 25.1647958859088 0.0366666666666667 0.356 0.644463279972504 0.00304453107659549 0.48833426940847 5.07924188646727 Q5T481 RBM20 Q5T481.S1060.p_RBM20 Q5T481_S1060s_1_1_1060_1060 Q5T481 Q5T481 RNA-binding protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18573.18573.2 9.62 9.62 99 1 1 1 0 742.8216 1421.6932 Q1058q S1060s Hydrogen 1058 (R) qPsPFVDDCK (T) Q(1.0)PS(1.0)PFVDDCK C:Carbamidomethylation,K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S RBM20 135496 5 9 522.1 283.33 HUMAN 1 1.908 25.1648 EERDRKCSAEQFDLP-p O95568;S49-p EERDRKCSAEQFDLP 0.916619826883899 0.67526106721046 0.0163333333333333 0.0416666666666667 0.73756648998824 2.33054519444733 0.0163333333333333 0.0416666666666667 0.843807441334575 0.584716676742605 0.206689138207019 0.580748424942233 O95568 METTL18 O95568.S49.p_METTL18 O95568_S49s _1_1_49_49 O95568 O95568 Histidine protein methyltransferase 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18195.18195.5 11.92 11.92 99 1 1 1 0 607.9089 2955.539 S49s TMT10 47 (R) KCsAEQFDLPQDHLWEHK (S) KCS(1.0)AEQFDLPQDHLWEHK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S METTL18 42489.7 1 1 6386.1 11.92 HUMAN 1 0.7376 2.3305 EEREKNGSEEDDDEK-p Q6ZU65;S584-p EEREKNGSEEDDDEK 0.204713889706557 0.0616259456177391 -0.396666666666667 0.458 13.3221749982167 16.1137820520983 -0.396666666666667 0.458 0.0465352980869136 0.0244693140429834 -2.56928645606294 3.08786708080553 Q6ZU65 UBN2 Q6ZU65.S584.p_UBN2 Q6ZU65_S584s _1_1_584_584 Q6ZU65 Q6ZU65|Q6ZU65-2 Ubinuclein-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7080.7080.3 14.42 14.42 99 1 1 1 0 729.6863 2107.0758 S584s TMT10 582 (K) NGsEEDDDEKPGK (R) NGS(1.0)EEDDDEKPGK K:TMT10,s:Phosphorylated S UBN2 146713.5 6 6 1034.1 185.79 HUMAN 1 -13.3222 16.1138 EERKMNDSLEDMFDR-p I6L8A6;S728-p EERKMNDSLEDMFDR 0.566489673579897 0.00391261565215446 0.0916666666666667 -0.778666666666667 4.54674054085952 35.512277180762 0.0916666666666667 -0.778666666666667 0.351015218428689 0.00028104268240953 1.02029966916838 -8.28472541725161 I6L8A6 NotFound I6L8A6.S728.p_NotFound I6L8A6_S728s _1_1_728_728 I6L8A6 Q99708-2|I6L8A6|Q99708-3 DNA endonuclease RBBP8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19984.19984.3 12.36 12.36 99 1 1 1 0 680.3173 1958.9716 S728s TMT10 724 (R) KMNDsLEDMFDR (T) KMNDS(1.0)LEDMFDR K:TMT10,s:Phosphorylated S RBBP8 103921.2 2 13 258.1 398.22 HUMAN 1 4.5467 -35.5123 EERLRPPSPPPVVHY-p Q16206;S240-p EERLRPPSPPPVVHY 0.232598667343954 0.408269333223645 0.196 -0.094 12.174002814798 5.17869322242129 0.196 -0.094 0.0606177369164107 0.303480420926629 2.36323636362881 -1.13646929120111 Q16206 ENOX2 Q16206.S240.p_ENOX2 Q16206_S240s _1_1_240_240 Q16206 Q16206|Q16206-2 Ecto-NOX disulfide-thiol exchanger 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17831.17831.5 15.44 15.44 2.187 4 1 1 0 631.3281 3072.6341 S240s TMT10 236 (R) LRPPsPPPVVHYSDHECSIVAEK (L) LRPPS(0.99)PPPVVHY(0.0)S(0.0)DHECS(0.0)IVAEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ENOX2 70879.6 1 1 5283.1 20.98 HUMAN 1 12.174 -5.1787 EERLTWHSCPEDEAQ-p Q13185;S176-p EERLTWHSCPEDEAQ 0.859922192386175 0.265623415787645 -0.0263333333333333 0.114333333333333 1.27982469183003 7.58101326135294 -0.0263333333333333 0.114333333333333 0.744762036510972 0.174541487909021 -0.34266802558162 1.56191309958202 Q13185 CBX3 Q13185.S176.p_CBX3 Q13185_S176s _1_1_176_176 Q13185 Q13185 Chromobox protein homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14595.14595.2 13.63 13.63 4.601 2 1 1 0 891.3729 1701.774 S176s TMT10 172 (R) LTWHsCPEDEAQ (-) LT(0.0)WHS(0.99)CPEDEAQ C:Carbamidomethylation,s:Phosphorylated S CBX3 20982.2 2 13 1104.2 177.13 HUMAN 1 -1.2798 7.581 EERLTWHSYPSEDDD-p P83916;S172-p EERLTWHSYPSEDDD 0.911605742223265 0.0175738606294931 0.0203333333333333 0.407666666666667 0.787086618696146 24.1919754397388 0.0203333333333333 0.407666666666667 0.834240631291768 0.00380892530518957 0.219584204496587 4.83621375315764 P83916 CBX1 P83916.S172.p_CBX1 P83916_S172s _1_1_172_172 P83916 P83916 Chromobox protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13442.13442.4 17.89 16.96 3.03 4 1 1 0 798.153 3109.6248 S172s TMT10 168 (R) LTWHsYPSEDDDKKDDKN (-) LT(0.0)WHS(0.99)Y(0.0)PS(0.0)EDDDKKDDKN K:TMT10,s:Phosphorylated S CBX1 21531.5 6 4 1104.1 177.13 HUMAN 1 0.7871 24.192 EERNSAISPQKIHNQ-p Q9H582;S1189-p EERNSAISPQKIHNQ 0.25414491835742 0.00404124447761282 0.502 -0.88 11.3308551829383 35.2704028182966 0.502 -0.88 0.0736062142909376 0.000297139041554064 2.21417712890869 -8.19429286815416 Q9H582 ZNF644 Q9H582.S1189.p_ZNF644 Q9H582_S1189s _1_1_1189_1189 Q9H582 Q9H582|Q9H582-2 Zinc finger protein 644 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7040.7040.3 14.01 10.32 3.252 3 1 1 0 735.0626 2123.2086 S1189s TMT10 1185 (R) NSAIsPQKIHNQTAR (K) NS(0.0)AIS(0.99)PQKIHNQT(0.0)AR K:TMT10,s:Phosphorylated S ZNF644 151445.4 2 9 1099.1 177.93 HUMAN 1 11.3309 -35.2704 EERPKQYSWDQREKV-p O75695;S28-p EERPKQYSWDQREKV 0.0412311366109555 0.280672889754143 -1.215 0.126666666666667 30.887237744933 7.27168443472591 -1.215 0.126666666666667 0.000815222627438247 0.187426742227932 -6.70667579865518 1.50805834748941 O75695 RP2 O75695.S28.p_RP2 O75695_S28s _1_1_28_28 O75695 O75695 Protein XRP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9813.9813.3 12.19 7.73 4.511 2 1 1 0 593.2945 1697.9011 S28s TMT10 26 (K) QYsWDQREK (V) QY(0.0)S(0.99)WDQREK K:TMT10,s:Phosphorylated S RP2 40496.2 4 2 3875.1 41.48 HUMAN 1 -30.8872 7.2717 EERPRRPSQEQSASA-p Q5T1M5;S956-p EERPRRPSQEQSASA 0.302203625336609 0.155477076231445 -0.173 0.312333333333333 9.737877511641 10.6305441617575 -0.173 0.312333333333333 0.106221455693173 0.0864859546922971 -1.9362046706754 2.09059655041789 Q5T1M5 FKBP15 Q5T1M5.S956.p_FKBP15 Q5T1M5_S956s _1_1_956_956 Q5T1M5 Q5T1M5|Q5T1M5-2 FK506-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6041.6041.3 24.03 24.03 3.354 5 1 1 0 835.7398 2425.2381 S956s TMT10 954 (R) RPsQEQSASASSGQPQAPLNR (E) RPS(0.99)QEQS(0.0)AS(0.0)AS(0.0)S(0.0)GQPQAPLNR s:Phosphorylated S FKBP15 134140.9 5 9 173.1 487.64 HUMAN 1 -9.7379 10.6305 EERRLGDSSLSRKDS-p Q14152;S881-p EERRLGDSSLSRKDS 0.0499167591004882 0.0111559635900129 -0.646333333333333 -0.483 28.8045456978181 27.3421936941338 -0.646333333333334 -0.483 0.00131687766006338 0.00184408370633531 -6.07649016344525 -5.65457091009474 Q14152 EIF3A Q14152.S881.p_EIF3A Q14152_S881s _1_1_881_881 Q14152 Q14152|Q14152-2 Eukaryotic translation initiation factor 3 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6528.6528.3 10.03 3.61 1.15 3 1 1 0 433.8927 1219.6956 S881s TMT10 877 (R) RLGDsSLSR (K) RLGDS(0.99)S(0.0)LS(0.0)R s:Phosphorylated S EIF3A 166965.8 14 5 1342.1 151.61 HUMAN 1 -28.8045 -27.3422 EERRTSFSTSDVSKL-p Q13459;S1356-p EERRTSFSTSDVSKL 0.561099518094358 0.184287268283628 0.122 0.132666666666667 4.620713104228 9.65744131471845 0.122 0.132666666666667 0.345087071967373 0.108207127563099 1.03406943029305 1.9215055887681 Q13459 MYO9B Q13459.S1356.p_MYO9B Q13459_S1356s _1_1_1356_1356 Q13459 Q13459|M0R0P8|Q13459-2 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13339.13339.2 12.16 12.16 1.144 6 1 1 0 798.8998 1516.8259 S1356s TMT10 1353 (R) TSFsTSDVSK (L) T(0.0)S(0.0)FS(0.99)T(0.0)S(0.0)DVS(0.0)K K:TMT10,s:Phosphorylated S MYO9B 244993.9 4 15 211.1 438.12 HUMAN 1 4.6207 9.6574 EERSGDETPGSEVPG-p Q1KMD3;T165-p EERSGDETPGSEVPG 0.930335474168179 0.0332666986005803 0.0203333333333333 0.598666666666667 0.622708469486764 19.9250329328662 0.0203333333333333 0.598666666666667 0.866421365153047 0.0101741165104487 0.176363174829318 3.85928604484923 Q1KMD3 HNRNPUL2 Q1KMD3.T165.p_HNRNPUL2 Q1KMD3_T165t _1_1_165_165 Q1KMD3 Q1KMD3|H3BQZ7 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7129.7129.3 19 13.72 2.367 3 1 1 0 899.7148 2617.1587 T165t Hydrogen 153 (R) EEDEPEERSGDEtPGSEVPGDK (A) EEDEPEERS(0.0)GDET(0.99)PGS(0.0)EVPGDK K:TMT10-Lys-Only,t:Phosphorylated T HNRNPUL2 85673.7 6 2 294.1 379.87 HUMAN 1 0.6227 19.925 EERSRPNSGDEKRKL-p Q49A26;S122-p EERSRPNSGDEKRKL 0.180325945197864 0.125142237708285 0.256 0.299666666666667 14.6763905604633 11.9029552800138 0.256 0.299666666666667 0.0340691221964342 0.0645215024748404 2.81797542656148 2.3139897086535 Q49A26 GLYR1 Q49A26.S122.p_GLYR1 Q49A26_S122s _1_1_122_122 Q49A26 Q49A26|Q49A26-3|Q49A26-2|Q49A26-4 Putative oxidoreductase GLYR1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3092.3092.2 7.88 7.88 2.142 2 1 1 0 649.8004 1218.6276 S122s Hydrogen 118 (R) SRPNsGDEK (R) S(0.0)RPNS(0.99)GDEK K:TMT10-Lys-Only,s:Phosphorylated S GLYR1 61125.9 3 1 2303.1 88.97 HUMAN 1 14.6764 11.903 EERVASDSPKPALTL-p Q69YH5;S726-p EERVASDSPKPALTL 0.757201638201782 0.0239943962805675 0.0446666666666667 -0.558333333333333 2.31288460011151 22.0814203617855 0.0446666666666667 -0.558333333333334 0.587099269477073 0.00619238519757909 0.577029383086444 -4.33596589257507 Q69YH5 CDCA2 Q69YH5.S726.p_CDCA2 Q69YH5_S726s _1_1_726_726 Q69YH5 Q69YH5|E9PEI0 Cell division cycle-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28547.28547.4 26.11 26.11 1.439 4 1 1 0 1084.5475 4255.2061 S726s TMT10 722 (R) VASDsPKPALTLQQGQEFSAGGQNAENLCQFFK (I) VAS(0.0)DS(0.99)PKPALT(0.0)LQQGQEFS(0.0)AGGQNAENLCQFFK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CDCA2 114214.8 3 11 407.1 324.13 HUMAN 1 2.3129 -22.0814 EERVRSGSGSRGQEE-p Q9NR19-2;S12-p EERVRSGSGSRGQEE 0.322999028152805 0.639524717870826 -0.197 0.130333333333333 9.18989965176848 2.64397471168916 -0.197 0.130333333333333 0.120506378429513 0.544004545893699 -1.84124051328076 0.647038216746513 Q9NR19 ACSS2 Q9NR19.2.S12.p_ACSS2 Q9NR19-2_S12s _1_1_12_12 Q9NR19-2 Q9NR19-2 Isoform 2 of Acetyl-coenzyme A synthetase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3629.3629.2 11.11 5.48 1.321 3 1 1 0 886.3992 1691.8259 S12s TMT10 10 (R) SGsGSRGQEEAGAGGR (A) S(0.0)GS(0.99)GS(0.0)RGQEEAGAGGR s:Phosphorylated S ACSS2 81170 1 1 3144.1 59.44 HUMAN 1 -9.1899 2.644 EERWGEASNDEDDPK-p Q5SXM2;S68-p EERWGEASNDEDDPK 0.676823734876953 0.458061127544578 0.109333333333333 0.311666666666667 3.17343622861523 4.52004457921486 0.109333333333333 0.311666666666667 0.481566621282499 0.353179544475896 0.75542428835577 1.01513123098626 Q5SXM2 SNAPC4 Q5SXM2.S68.p_SNAPC4 Q5SXM2_S68s _1_1_68_68 Q5SXM2 Q5SXM2 snRNA-activating protein complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12725.12725.3 14.06 8.18 99 1 1 1 0 791.7119 2293.1551 S68s TMT10 64 (R) WGEAsNDEDDPKDK (T) WGEAS(1.0)NDEDDPKDK K:TMT10,s:Phosphorylated S SNAPC4 160228.7 3 1 1272.1 159.49 HUMAN 1 3.1734 4.52 EESDLRRSPRVKTTP-p P46100;S656-p EESDLRRSPRVKTTP 0.932098009206702 0.98639051739355 0.015 0.00366666666666667 0.605377874967034 0.0894356851805922 0.015 0.00366666666666667 0.869885741947733 0.979617266930779 0.171734975175807 0.0267484559120597 P46100 ATRX P46100.S656.p_ATRX P46100_S656s _1_1_656_656 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28119.28119.5 16.48 16.48 1.285 4 1 1 0 801.5864 3923.9355 S656s TMT10 627 (K) CGLGQENSDNEHLVENEVSLLLEESDLRRsPR (V) CGLGQENS(0.0)DNEHLVENEVS(0.0)LLLEES(0.0)DLRRS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S ATRX 285034.2 2 13 18.1 1035.36 HUMAN 1 0.6054 0.0894 EESEELSSDEEMKMA-p Q96RT1-8;S603-p EESEELSSDEEMKMA 0.284101767600348 0.0123363927352173 -0.185333333333333 0.405 10.3095513406674 26.6495605138038 -0.185333333333333 0.405 0.0931204070983663 0.00216293739204588 -2.03554517173085 5.46664463783877 Q96RT1 ERBB2IP Q96RT1.8.S603.p_ERBB2IP Q96RT1-8_S602sS603s_2_2_602_603 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5|Q96RT1-4|Q96RT1-6|Q96RT1-7 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18194.18194.3 24.86 24.86 3.308 3 2 2 0 1079.4655 3076.4457 S602s S603s TMT10 587 (K) HIVNHDDVFEESEELssDEEMK (M) HIVNHDDVFEES(0.0)EELS(0.99)S(0.99)DEEMK K:TMT10,s:Phosphorylated S ERBIN 159762.8 8 32 81.1 633.5 HUMAN 1 -10.3096 26.6496 EESIHCKSVEEISTL-p Q8N983-7;S93-p EESIHCKSVEEISTL 0.365498843349433 0.00971279204227282 -0.182333333333333 0.629333333333333 8.1139570834214 28.3390295134802 -0.182333333333333 0.629333333333334 0.154384711890373 0.00146587537294395 -1.65492352097914 5.93353501224419 Q8N983 MRPL43 Q8N983.7.S93.p_MRPL43 Q8N983-7_S93s _1_1_93_93 Q8N983-7 Q8N983-7|Q8N983-6|Q8N983-2|B1AL05|Q8N983-3|Q8N983-4 Isoform 6 of 39S ribosomal protein L43, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23774.23774.3 10.72 9.29 5.683 3 1 1 0 590.9934 1690.9991 S93s TMT10 93 (K) sVEEISTLVQK (L) S(0.99)VEEIS(0.0)T(0.0)LVQK K:TMT10,s:Phosphorylated S MRPL43 29302.8 1 2 5352.1 20.15 HUMAN 1 -8.114 28.339 EESIRKPSPEPRAQM-p A0A1B0GTW1;S1025-p EESIRKPSPEPRAQM 0.735321298360423 0.20909115353984 0.0553333333333333 -0.125666666666667 2.5274488900114 8.94058746837887 0.0553333333333333 -0.125666666666667 0.558798344755753 0.127626615713048 0.622681618154169 -1.79743623736244 A0A1B0GTW1 NotFound A0A1B0GTW1.S1025.p_NotFound A0A1B0GTW1_S1025s _1_1_1025_1025 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6977.7190.4 13.22 11.4 1.552 4 1 1 0 682.6032 2647.4204 S1025s TMT10 1011 (R) SSEPVQHEESIRKPsPEPR (A) S(0.0)S(0.0)EPVQHEES(0.0)IRKPS(0.99)PEPR K:TMT10,s:Phosphorylated S TJP2 141123.7 12 25 41.1 827.72 HUMAN 1 2.5274 -8.9406 EESKNLESPEKHLQN-p P26374;S649-p EESKNLESPEKHLQN 0.192411628688498 0.00135225379251175 -0.352333333333333 -1.01633333333333 13.9698100818474 46.6084576368955 -0.352333333333333 -1.01633333333333 0.0400884248020685 2.18350522907554e-05 -2.68737723675971 -13.5441527240689 P26374 CHML P26374.S649.p_CHML P26374_S649s _1_1_649_649 P26374 P26374 Rab proteins geranylgeranyltransferase component A 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9938.9938.2 9.91 9.91 99 1 1 1 0 677.8547 1274.7356 S649s TMT10 646 (K) NLEsPEK (H) NLES(1.0)PEK K:TMT10,s:Phosphorylated S CHML 75325.3 3 4 3269.1 55.38 HUMAN 1 -13.9698 -46.6085 EESLKRRSFHIENKL-p Q96L93-2;S662-p EESLKRRSFHIENKL 0.511272956349633 0.199723536184449 -0.123 -0.389 5.3851659054564 9.20378497712453 -0.123 -0.389 0.289389926469358 0.120121708974058 -1.1741968429039 -1.84296545846572 Q96L93 KIF16B Q96L93.2.S662.p_KIF16B Q96L93-2_S662s _1_1_662_662 Q96L93-2 Q96L93-2|Q96L93-4 Isoform 2 of Kinesin-like protein KIF16B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8924.8924.2 10.88 5.77 99 1 1 1 0 592.29 1103.6047 S662s Hydrogen 662 (R) sFHIENK (L) S(1.0)FHIENK K:TMT10-Lys-Only,s:Phosphorylated S KIF16B 160684.4 2 7 774.1 227.33 HUMAN 1 -5.3852 -9.2038 EESMKENSGPVENGV-p Q8TEQ6;S770-p EESMKENSGPVENGV 0.139932386670141 0.0324634331370235 -0.534666666666667 0.297333333333333 17.4742116508676 20.0864397707791 -0.534666666666667 0.297333333333333 0.0178887022268711 0.00980293274136428 -3.35662646956165 3.89386211119988 Q8TEQ6 GEMIN5 Q8TEQ6.S770.p_GEMIN5 Q8TEQ6_S770s_1_1_770_770 Q8TEQ6 Q8TEQ6 Gem-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24936.24936.5 13.44 13.44 1.11 6 1 1 0 1136.5458 5596.7212 N769n S770s N775n TMT10 768 (K) EnsGPVEnGVSDQEGEEQAREPELPCGLAPAVSREPVICTPVSSGFEK (S) EN(1.0)S(0.99)GPVEN(1.0)GVS(0.0)DQEGEEQAREPELPCGLAPAVS(0.0)REPVICT(0.0)PVS(0.0)S(0.0)GFEK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S GEMIN5 170925.5 4 5 798.1 223.37 HUMAN 1 -17.4742 20.0864 EETAAAGSPGRKQQF-p E9PIM0;S50-p EETAAAGSPGRKQQF 0.749609568226601 0.0509012795530668 -0.0483333333333333 -0.297333333333333 2.38079374633601 17.2721097040371 -0.0483333333333334 -0.297333333333333 0.577990400267931 0.0187408389947972 -0.591572505975379 -3.31384695669591 E9PIM0 CREBZF E9PIM0.S50.p_CREBZF E9PIM0_S50s _1_1_50_50 E9PIM0 E9PIM0|Q9NS37 CREB/ATF bZIP transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6374.6374.3 16.63 16.63 2.173 2 1 1 0 704.3562 2031.0871 S50s TMT10 38 (R) AAAGEEETAAAGsPGRK (Q) AAAGEEET(0.0)AAAGS(0.99)PGRK K:TMT10,s:Phosphorylated S CREBZF 37998.2 4 2 1443.1 141.64 HUMAN 1 -2.3808 -17.2721 EETDENETEWLMEEI-p P11717;T2367-p EETDENETEWLMEEI 0.682078728827876 0.597862038009916 0.0623333333333333 0.0553333333333333 3.11454866716924 3.02491360161828 0.0623333333333333 0.0553333333333334 0.488140827780682 0.498320369438703 0.743583923263848 0.725365710282004 P11717 IGF2R P11717.T2367.p_IGF2R P11717_T2367t_1_1_2367_2367 P11717 P11717 Cation-independent mannose-6-phosphate receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29855.30057.3 10.43 10.43 1.129 2 1 1 0 1198.9075 3513.746 N2365n T2367t TMT10 2356 (K) VNKEEETDEnEtEWLMEEIQLPPPR (Q) VN(0.0)KEEET(0.0)DEN(0.99)ET(0.99)EWLMEEIQLPPPR K:TMT10,n:Deamidated,t:Phosphorylated T IGF2R 281330.5 1 4 1952.1 105.32 HUMAN 1 3.1145 3.0249 EETGRVLSIGDGIAR-p P25705;S76-p EETGRVLSIGDGIAR 0.950174393059231 0.0676290831733223 0.0103333333333333 0.212 0.439103671417663 15.5646313994646 0.0103333333333333 0.212 0.903835994729278 0.0277675050838848 0.12658972044294 2.98299725161952 P25705 ATP5A1 P25705.S76.p_ATP5A1 P25705_S76s _1_1_76_76 P25705 P25705|P25705-3|P25705-2 ATP synthase subunit alpha, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29314.29314.3 17.33 15.09 2.224 4 1 1 0 956.1633 2786.5097 S76s TMT10 59 (R) ILGADTSVDLEETGRVLsIGDGIAR (V) ILGADT(0.0)S(0.0)VDLEET(0.0)GRVLS(0.99)IGDGIAR s:Phosphorylated S ATP5A1 59863.7 4 3 1547.1 132.65 HUMAN 1 0.4391 15.5646 EETREPGSPPSVQRA-p Q9H6F5;S47-p EETREPGSPPSVQRA 0.919202254627835 0.689044469674517 0.0163333333333333 -0.044 0.713781334442464 2.21594736397241 0.0163333333333333 -0.044 0.848441428601641 0.600351034878925 0.200457651993126 -0.556044071739328 Q9H6F5 CCDC86 Q9H6F5.S47.p_CCDC86 Q9H6F5_S47s _1_1_47_47 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13952.13952.4 22.43 22.43 3.112 4 1 1 0 755.8709 2940.5013 S47s TMT10 30 (R) RALVEFESNPEETREPGsPPSVQR (A) RALVEFES(0.0)NPEET(0.0)REPGS(0.99)PPS(0.0)VQR s:Phosphorylated S CCDC86 40349 13 4 346.1 352.36 HUMAN 1 0.7138 -2.2159 EETRTPESQPDTPPG-p Q96T60;S114-p EETRTPESQPDTPPG 0.279536310464441 0.0267993741022705 0.259333333333333 0.290333333333333 10.4667813415305 21.3387194955416 0.259333333333333 0.290333333333333 0.0898094146594521 0.00734730469333205 2.06293604544051 4.16808945879437 Q96T60 PNKP Q96T60.S114.p_PNKP Q96T60_S114sT118t_2_2_114_118 Q96T60 Q96T60|M0QYH2|A0A0D9SFL2|Q96T60-2|M0R3C8|A0A0D9SEV0 Bifunctional polynucleotide phosphatase/kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17436.17436.4 17.08 17.08 1.886 5 2 2 0 888.4276 3390.7793 S114s T118t Hydrogen 111 (R) TPEsQPDtPPGTPLVSQDEKRDAELPK (K) T(0.0)PES(0.99)QPDT(0.99)PPGT(0.0)PLVS(0.0)QDEKRDAELPK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T PNKP 57588.8 6 2 1712.1 119.92 HUMAN 1 10.4668 21.3387 EETSPLVTHQNPAGP-p P43007;T511-p EETSPLVTHQNPAGP 0.407521297549467 0.493056868318544 -0.176666666666667 0.0853333333333334 7.19843511399568 4.10458709814827 -0.176666666666667 0.0853333333333333 0.19061474331339 0.388634445293322 -1.49570548146078 0.936907702708899 P43007 SLC1A4 P43007.T511.p_SLC1A4 P43007_T511t _1_1_511_511 P43007 P43007|P43007-2 Neutral amino acid transporter A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18004.18004.3 14.83 14.83 1.277 6 1 1 0 1114.8888 3262.6843 T511t TMT10 502 (K) SEEETSPLVtHQNPAGPVASAPELESK (E) S(0.0)EEET(0.0)S(0.0)PLVT(0.99)HQNPAGPVAS(0.0)APELES(0.0)K K:TMT10,t:Phosphorylated T SLC1A4 56121.4 1 3 2549.1 78.96 HUMAN 1 -7.1984 4.1046 EETSRALSAPRADAK-p Q15149;S3309-p EETSRALSAPRADAK 0.115394242154175 0.00259686134026793 -0.421666666666667 -0.739666666666667 19.5069103723448 39.4664597281447 -0.421666666666667 -0.739666666666667 0.0112023454954099 0.000113071727461553 -3.77391802382536 -9.89395013047785 Q15149 PLEC Q15149.S3309.p_PLEC Q15149_S3309s _1_1_3309_3309 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9233.9233.3 7.52 7.52 99 1 1 1 0 513.2888 1457.884 S3309s TMT10 3307 (R) ALsAPRADAK (A) ALS(1.0)APRADAK K:TMT10,s:Phosphorylated S PLEC 533778 1 24 44.1 794.85 HUMAN 1 -19.5069 -39.4665 EEVAKRNSLKELWLV-p J3KNF8;S37-p EEVAKRNSLKELWLV 0.222308331206721 0.0251580961035514 0.948666666666667 -0.694 12.5669746423558 21.7622468454023 0.948666666666667 -0.694 0.0553735715131256 0.0066646188243771 2.43332293923408 -4.26332632091104 J3KNF8 CYB5B J3KNF8.S37.p_CYB5B J3KNF8_S37s _1_1_37_37 J3KNF8 J3KNF8|O43169 Cytochrome b5 type B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21820.21820.4 15.83 15.83 99 1 1 1 0 565.5776 2179.3228 S37s TMT10 35 (K) RNsLKELWLVIHGR (V) RNS(1.0)LKELWLVIHGR K:TMT10,s:Phosphorylated S CYB5B 16808.4 2 3 3363.1 52.81 HUMAN 1 12.567 -21.7622 EEVDGYETDHQDYCE-p Q12873-3;T435-p EEVDGYETDHQDYCE 0.126867028860092 0.0217203267172977 0.288666666666667 0.371666666666667 18.5958613542513 22.7397530797712 0.288666666666667 0.371666666666667 0.0138170034036704 0.00532138513399358 3.58387611965254 4.48822003514695 Q12873 CHD3 Q12873.3.T435.p_CHD3 Q12873-3_T435t _1_1_435_435 Q12873-3 Q12873-3|Q12873-2 Isoform 3 of Chromodomain-helicase-DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22287.22287.5 35.4 35.4 1.333 4 1 1 0 1079.8826 5315.41 T435t TMT10 417 (K) KVLGCPAVAGEEEVDGYEtDHQDYCEVCQQGGEIILCDTCPR (A) KVLGCPAVAGEEEVDGY(0.0)ET(0.99)DHQDY(0.0)CEVCQQGGEIILCDT(0.0)CPR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T CHD3 234573.2 2 45 49.3 753.68 HUMAN 1 18.5959 22.7398 EEVDLACTPTDVRDV-p P24385;T286-p EEVDLACTPTDVRDV 0.163356162708595 0.471350288833995 -0.225333333333333 -0.0866666666666667 15.7603335397208 4.35410989861822 -0.225333333333333 -0.0866666666666667 0.0265440169514424 0.366934891295048 -3.02230588734265 -0.984063530572781 P24385 CCND1 P24385.T286.p_CCND1 P24385_T286t _1_1_286_286 P24385 P24385 G1/S-specific cyclin-D1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22760.22760.3 22.82 22.49 2.315 2 1 1 0 1101.1401 3221.4365 T286t TMT10 270 (K) AAEEEEEEEEEVDLACtPTDVRDVDI (-) AAEEEEEEEEEVDLACT(0.99)PT(0.0)DVRDVDI C:Carbamidomethylation,t:Phosphorylated T CCND1 34470.2 2 1 5112.1 22.82 HUMAN 1 -15.7603 -4.3541 EEVEEEDSDREIQEL-p Q92622;S528-p EEVEEEDSDREIQEL 0.431012713610678 0.539657545075539 -0.106333333333333 0.07 6.72984814000561 3.60323494219924 -0.106333333333333 0.07 0.212331870690613 0.436190804463653 -1.41363665895838 0.84035254451785 Q92622 KIAA0226 Q92622.S528.p_KIAA0226 Q92622_S528s _1_1_528_528 Q92622 Q92622|Q92622-2|Q92622-3 Run domain Beclin-1-interacting and cysteine-rich domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21568.21568.5 19.92 19.92 5.598 2 1 1 0 760.3318 3717.664 S528s TMT10 511 (K) CNMMSQCLEEEEVEEEDsDREIQELK (Q) CNMMS(0.0)QCLEEEEVEEEDS(0.99)DREIQELK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RUBCN 110331.4 2 8 919.1 200.35 HUMAN 1 -6.7298 3.6032 EEVHDDGTPTSKTFE-p P51665;T149-p EEVHDDGTPTSKTFE 0.25732510617176 0.573763212763696 0.248 -0.101333333333333 11.2009051288885 3.25219177084914 0.248 -0.101333333333333 0.0758419493597942 0.472912532120464 2.19134424648464 -0.771072363140128 P51665 PSMD7 P51665.T149.p_PSMD7 P51665_T149t _1_1_149_149 P51665 P51665 26S proteasome non-ATPase regulatory subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25277.25277.3 23.87 23.87 2 6 1 1 0 1037.8451 3031.5512 T149t TMT10 130 (K) DLGLPTEAYISVEEVHDDGtPTSK (T) DLGLPT(0.0)EAY(0.0)IS(0.0)VEEVHDDGT(0.99)PT(0.0)S(0.0)K K:TMT10,t:Phosphorylated T PSMD7 37081.8 2 1 5017.1 23.87 HUMAN 1 11.2009 -3.2522 EEVILKGSPEEKVVL-p Q5VUA4;S1420-p EEVILKGSPEEKVVL 0.673354460470683 0.0969439764704487 0.0593333333333333 0.179666666666667 3.21816329402763 13.4040680775143 0.0593333333333333 0.179666666666667 0.476632520267426 0.0456660231249327 0.76438585425892 2.58266916150158 Q5VUA4 ZNF318 Q5VUA4.S1420.p_ZNF318 Q5VUA4_S1420s _1_1_1420_1420 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20183.20183.4 20.86 20.86 99 1 1 1 0 615.0868 2377.3582 S1420s TMT10 1409 (K) AFGGEEVILKGsPEEK (V) AFGGEEVILKGS(1.0)PEEK K:TMT10,s:Phosphorylated S ZNF318 252762.4 3 21 37.1 870.88 HUMAN 1 3.2182 13.4041 EEVKSLDSNGAGEKS-p Q9BXK5;S291-p EEVKSLDSNGAGEKS 0.840299429548807 0.123652029356351 -0.0286666666666667 0.183333333333333 1.45959952598524 11.9762270447271 -0.0286666666666667 0.183333333333333 0.714562214641288 0.0634420628045158 -0.385497445647361 2.32696028942814 Q9BXK5 BCL2L13 Q9BXK5.S291.p_BCL2L13 Q9BXK5_S291s_1_1_291_291 Q9BXK5 A0A087WX97|Q9BXK5|A0A087WTL4|Q9BXK5-4 Bcl-2-like protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9234.9234.2 11.67 9.47 3.683 2 1 1 0 758.8682 1435.7793 S291s N292n TMT10 288 (K) SLDsnGAGEK (S) S(0.0)LDS(0.99)N(1.0)GAGEK K:TMT10,s:Phosphorylated S,n:Deamidated BCL2L13 52836.3 2 2 810.1 221.13 HUMAN 1 -1.4596 11.9762 EEVQEDLTEEKKREL-p O00461;T626-p EEVQEDLTEEKKREL 0.796289087702069 0.0201924503100698 0.0656666666666667 0.357 1.91112840861773 23.2112188530311 0.0656666666666666 0.357 0.644001915535589 0.00477395273259422 0.48902958461857 4.59932517179366 O00461 GOLIM4 O00461.T626.p_GOLIM4 O00461_Y613yT626t_2_2_613_626 O00461 O00461|F8W785 Golgi integral membrane protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25076.25076.5 12.96 12.96 4.286 3 2 2 0 1139.8832 5534.4713 N608n Y613y T626t TMT10 587 (K) QENTEVEEHLVMAGNPDQQEDnVDEQyQEEAEEEVQEDLtEEK (K) Q(0.0)EN(0.0)T(0.0)EVEEHLVM(0.0)AGN(0.0)PDQQEDN(0.99)VDEQY(0.99)QEEAEEEVQEDLT(0.99)EEK K:TMT10,n:Deamidated,y:Phosphorylated Y,t:Phosphorylated T GOLIM4 81935.9 1 2 3579.1 47.78 HUMAN 1 1.9111 23.2112 EEVQKAKTPTPEPFD-p Q9NSY0;T409-p EEVQKAKTPTPEPFD 0.0608497647854506 0.752628053383012 -0.443666666666667 -0.035 26.61482278534 1.70466253577029 -0.443666666666667 -0.035 0.00218030736321272 0.675357529944838 -5.46473514172867 -0.442307784338102 Q9NSY0 NRBP2 Q9NSY0.T409.p_NRBP2 Q9NSY0_T409t _1_1_409_409 Q9NSY0 Q9NSY0|Q9NSY0-4 Nuclear receptor-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11044.11044.3 11.15 8.59 9.598 4 1 1 0 824.4415 2391.3487 T409t TMT10 407 (K) AKtPTPEPFDSETRK (V) AKT(0.99)PT(0.0)PEPFDS(0.0)ET(0.0)RK K:TMT10,t:Phosphorylated T NRBP2 58315.5 3 3 2343.1 87.17 HUMAN 1 -26.6148 -1.7047 EEVTKRNSPSGTTTK-p Q5T0W9;S729-p EEVTKRNSPSGTTTK 0.265419473261086 0.00963400225198682 -0.241333333333333 0.746333333333333 10.9216305165625 28.4244995818476 -0.241333333333333 0.746333333333334 0.080879218897678 0.0014373086584784 -2.14238523184149 5.95793502169781 Q5T0W9 FAM83B Q5T0W9.S729.p_FAM83B Q5T0W9_S729s _1_1_729_729 Q5T0W9 Q5T0W9 Protein FAM83B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3471.3471.3 10.11 5.31 2.27 5 1 1 0 529.6148 1506.864 S729s TMT10 727 (K) RNsPSGTTTK (S) RNS(0.99)PS(0.0)GT(0.0)T(0.0)T(0.0)K K:TMT10,s:Phosphorylated S FAM83B 115253.5 1 9 249.1 407.75 HUMAN 1 -10.9216 28.4245 EEWDPEYTPKSKKYF-p Q9NYF8;T840-p EEWDPEYTPKSKKYF 0.660414873314641 0.00326950192050815 0.083 -0.693 3.37269442507446 37.2386463449306 0.083 -0.693 0.459971112382209 0.000188857990996933 0.795145442822171 -8.95606654374604 Q9NYF8 BCLAF1 Q9NYF8.T840.p_BCLAF1 Q9NYF8_T840t _1_1_840_840 Q9NYF8 Q9NYF8|Q9NYF8-2|Q9NYF8-4 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12289.12289.5 17.38 10.5 2.831 2 1 1 0 515.0684 2491.3436 T840t TMT10 829 (K) RPKEEEWDPEYtPK (S) RPKEEEWDPEY(0.0)T(0.99)PK K:TMT10,t:Phosphorylated T BCLAF1 106234.3 6 38 10.1 1293.04 HUMAN 1 3.3727 -37.2386 EEWDPEYTPKSKKYY-p Q9Y2W1;T874-p EEWDPEYTPKSKKYY 0.460247258167029 0.0506089545372003 -0.188666666666667 -0.482 6.21410158677334 17.3118749073163 -0.188666666666667 -0.482 0.239105651556897 0.018570025891818 -1.32261574747209 -3.32172650642968 Q9Y2W1 THRAP3 Q9Y2W1.T874.p_THRAP3 Q9Y2W1_T874t _1_1_874_874 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10195.10195.4 16.66 10.05 2.911 2 1 1 0 597.5411 2307.177 T874t TMT10 863 (K) RNREEEWDPEYtPK (S) RNREEEWDPEY(0.0)T(0.99)PK K:TMT10,t:Phosphorylated T THRAP3 108720.9 4 84 10.2 1293.04 HUMAN 1 -6.2141 -17.3119 EEWTRHGSFVNKPTR-p P29353-7;S29-p EEWTRHGSFVNKPTR 0.0869195095593095 0.167297155109031 -0.385666666666667 -0.304 22.6280925073219 10.2144685827345 -0.385666666666667 -0.304 0.00545997619554587 0.0951816308417146 -4.46705502318583 -2.01816091344682 P29353 SHC1 P29353.7.S29.p_SHC1 P29353-7_S29s _1_1_29_29 P29353-7 P29353-6|P29353-7|P29353-2 Isoform 7 of SHC-transforming protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4305.4305.3 11.45 11.45 4.848 2 1 1 0 484.584 1371.7694 S29s Hydrogen 27 (R) HGsFVNKPTR (G) HGS(0.99)FVNKPT(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S SHC1 52137.1 5 2 2336.1 87.32 HUMAN 1 -22.6281 -10.2145 EEYETPESPVPPARS-p P54259;S739-p EEYETPESPVPPARS 0.883910399642057 0.203927140379653 0.0326666666666667 -0.185 1.05777842625724 9.08517084906634 0.0326666666666667 -0.185 0.783830497951559 0.12344767505774 0.288309396978398 -1.82244514034485 P54259 ATN1 P54259.S739.p_ATN1 P54259_S739sS746sS748s_3_3_739_748 P54259 P54259 Atrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16132.16132.4 15.35 15.35 2.129 5 3 3 0 854.3933 3174.6359 S739s S746s S748s TMT10 728 (K) QEPAEEYETPEsPVPPARsPsPPPK (V) QEPAEEY(0.0)ET(0.0)PES(0.99)PVPPARS(0.99)PS(0.99)PPPK K:TMT10,s:Phosphorylated S ATN1 125583.1 2 16 869.1 209.92 HUMAN 1 1.0578 -9.0852 EFADKSPTPPNLPSD-p A7KAX9;T1236-p EFADKSPTPPNLPSD 0.767078791435255 0.0532295808091252 0.051 0.328666666666667 2.20567708528603 16.9899110095746 0.051 0.328666666666667 0.601772436465512 0.0199990284882759 0.553883841164341 3.25816710693534 A7KAX9 ARHGAP32 A7KAX9.T1236.p_ARHGAP32 A7KAX9_T1236t_1_1_1236_1236 A7KAX9 A7KAX9|A7KAX9-2 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17706.17706.5 16.9 17.14 1.821 3 1 1 0 622.5374 3027.6871 T1236t N1239n TMT10 1224 (K) LHHPLEFADKSPtPPnLPSDK (I) LHHPLEFADKS(0.0)PT(0.99)PPN(1.0)LPS(0.0)DK K:TMT10,t:Phosphorylated T,n:Deamidated ARHGAP32 232236.5 4 22 159.1 497.4 HUMAN 1 2.2057 16.9899 EFANRCLSPERVLLQ-p P51587;S2648-p EFANRCLSPERVLLQ 0.20860981937115 0.00188708706215948 -0.187 -1.16433333333333 13.1349986138178 42.7803465173034 -0.187 -1.16433333333333 0.0485847686010454 5.27187796190775e-05 -2.53542164890914 -11.4554827817732 P51587 BRCA2 P51587.S2648.p_BRCA2 P51587_S2648s _1_1_2648_2648 P51587 P51587 Breast cancer type 2 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29028.29028.3 12.63 12.63 99 1 1 1 0 665.3804 1914.1611 S2648s TMT10 2646 (R) CLsPERVLLQLK (Y) CLS(1.0)PERVLLQLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRCA2 388531.4 1 11 876.1 208.99 HUMAN 1 -13.135 -42.7803 EFCNLHQSKEENLIS-p P53384;S312-p EFCNLHQSKEENLIS 0.383090443555865 0.180903275496246 0.147666666666667 0.140666666666667 7.71486779611384 9.76572231257084 0.147666666666667 0.140666666666667 0.169243976332915 0.105542595163422 1.58565528760166 1.94027165446369 P53384 NUBP1 P53384.S312.p_NUBP1 P53384_S312s _1_1_312_312 P53384 P53384|P53384-2 Cytosolic Fe-S cluster assembly factor NUBP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15739.15739.3 17.3 13.88 99 1 1 1 0 647.9932 1861.9995 S312s TMT10 303 (R) IQEFCNLHQsK (E) IQEFCNLHQS(1.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NUBP1 35161.5 4 4 2910.1 66.16 HUMAN 1 7.7149 9.7657 EFDELNPSAQRDACL-p P16615;S663-p EFDELNPSAQRDACL 0.471941186312508 0.992869511264831 0.1 -0.001 6.01585644859356 0.0445403171751213 0.1 -0.001 0.250273204950102 0.989796624221478 1.28738780447115 -0.0133885706663512 P16615 ATP2A2 P16615.S663.p_ATP2A2 P16615_S663s _1_1_663_663 P16615 P16615|P16615-4|P16615-3|P16615-2|P16615-5 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16429.16429.4 14.82 12.24 14.784 2 1 1 0 537.5085 2067.0457 S663s TMT10 651 (K) AFTGREFDELNPsAQR (D) AFT(0.0)GREFDELNPS(0.99)AQR s:Phosphorylated S ATP2A2 116409.4 10 11 1240.1 162.94 HUMAN 1 6.0159 -0.0445 EFEELKGSEPHMRTR-p Q8WWQ0;S1762-p EFEELKGSEPHMRTR 0.467536736396759 0.0829027332218913 -0.128 -0.229333333333333 6.09729571012025 14.3185643293977 -0.128 -0.229333333333333 0.24562379039532 0.0369950456078299 -1.30187751267615 -2.74990202958275 Q8WWQ0 PHIP Q8WWQ0.S1762.p_PHIP Q8WWQ0_S1762s _1_1_1762_1762 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21403.21403.5 14.21 14.21 99 1 1 1 0 708.7476 3459.7557 S1762s TMT10 1745 (K) KIDDPIDEEEEFEELKGsEPHMR (T) KIDDPIDEEEEFEELKGS(1.0)EPHMR K:TMT10,s:Phosphorylated S PHIP 208454.1 1 25 108.1 577.05 HUMAN 1 -6.0973 -14.3186 EFEELTMSQKNGGNV-p D6RFG8;S74-p EFEELTMSQKNGGNV 0.78149643092872 0.0540724707104225 0.066 0.266 2.05492177951562 16.8900453348442 0.066 0.266 0.623028368649675 0.0204642327454568 0.520930798148638 3.23856171848816 D6RFG8 NotFound D6RFG8.S74.p_NotFound D6RFG8_S74s_1_1_74_74 D6RFG8 D6RFG8|P27707|D6RCP9 Deoxycytidine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24316.24316.3 19.93 19.93 1.162 4 1 1 0 972.1067 2818.3428 M73m S74s TMT10 58 (R) WCNVQSTQDEFEELTmsQK (N) WCNVQS(0.0)T(0.0)QDEFEELT(0.0)M(1.0)S(0.99)QK C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,s:Phosphorylated S DCK 37277.6 10 3 2927.1 65.76 HUMAN 1 2.0549 16.89 EFEKKIPSVEDSLGE-p Q9C0C2;S1004-p EFEKKIPSVEDSLGE 0.178753992610445 0.0431438601871113 0.336333333333333 0.285 14.7648131618708 18.2894181897833 0.336333333333333 0.285 0.0333824866359719 0.014827167065844 2.83445696911179 3.51813780062217 Q9C0C2 TNKS1BP1 Q9C0C2.S1004.p_TNKS1BP1 Q9C0C2_S1004s _1_1_1004_1004 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15386.15386.2 11.96 11.96 2.879 3 1 1 0 1006.5261 1932.0802 S1004s TMT10 1001 (K) KIPsVEDSLGEGSR (D) KIPS(0.99)VEDS(0.0)LGEGS(0.0)R K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 2 40 4.1 2105.7 HUMAN 1 14.7648 18.2894 EFENFQKSCDGSQIG-p Q86UW6;S1144-p EFENFQKSCDGSQIG 0.480700630814427 0.0185733363835007 -0.194 -0.516666666666667 5.85707453455811 23.821951047264 -0.194 -0.516666666666667 0.259592742456293 0.0041476766837515 -1.25906045860754 -4.74590547427366 Q86UW6 N4BP2 Q86UW6.S1144.p_N4BP2 Q86UW6_S1144s _1_1_1144_1144 Q86UW6 Q86UW6|Q86UW6-2 NEDD4-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32013.32013.3 12.06 12.06 1.165 3 1 1 0 777.7329 2251.2157 S1144s TMT10 1144 (K) sCDGSQIGPFSLGLNLK (E) S(0.99)CDGS(0.0)QIGPFS(0.0)LGLNLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S N4BP2 200566.4 1 8 1216.1 165.62 HUMAN 1 -5.8571 -23.822 EFHGLVNSSGR____-p B8ZZ50;S233-p EFHGLVNSSGR____ 0.189369782273392 0.979322604665725 0.256333333333333 -0.00333333333333334 14.1541553853051 0.130279335627189 0.256333333333333 -0.00333333333333333 0.0384223975684528 0.970447546629192 2.72126581474672 -0.038788007017851 B8ZZ50 EIF4E2 B8ZZ50.S233.p_EIF4E2 B8ZZ50_S233s _1_1_233_233 B8ZZ50 B8ZZ50 Eukaryotic translation initiation factor 4E type 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19729.19729.3 10.66 10.66 1.153 2 1 1 0 633.2995 1817.9132 S233s TMT10 223 (K) AWEEFHGLVNsSGR (-) AWEEFHGLVNS(0.99)S(0.0)GR s:Phosphorylated S EIF4E2 27333 1 3 2999.1 63.57 HUMAN 1 14.1542 -0.1303 EFIPMPDSPSPLSAA-p Q8TD19;S827-p EFIPMPDSPSPLSAA 0.199306780118349 0.945747460858941 -0.214333333333333 -0.00799999999999999 13.6326467405702 0.349843785699505 -0.214333333333333 -0.00799999999999997 0.043324676237444 0.922604612343187 -2.62571581434872 -0.101759877203183 Q8TD19 NEK9 Q8TD19.S827.p_NEK9 Q8TD19_S827s_1_1_827_827 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35503.35503.4 20.13 20.13 1.349 7 1 1 0 1248.8705 4896.4996 M824m S827s TMT10 815 (K) ELENAEFIPmPDsPSPLSAAFSESEKDTLPYEELQGLK (V) ELENAEFIPM(1.0)PDS(0.99)PS(0.0)PLS(0.0)AAFS(0.0)ES(0.0)EKDT(0.0)LPY(0.0)EELQGLK K:TMT10,m:Oxidized methionine,s:Phosphorylated S NEK9 108935.2 21 11 224.1 425.83 HUMAN 1 -13.6326 -0.3498 EFIPQLESEDDTSYF-p Q6P0Q8;S806-p EFIPQLESEDDTSYF 0.449967305790725 0.648732833740591 0.109666666666667 0.0633333333333333 6.40719850827592 2.56365493798367 0.109666666666667 0.0633333333333334 0.228707364407777 0.554159147087243 1.35679291321593 0.630220039251873 Q6P0Q8 MAST2 Q6P0Q8.S806.p_MAST2 Q6P0Q8_S806s _1_1_806_806 Q6P0Q8 O15021-1|E7EWQ5|O15021-3|O15021-2|Q6P0Q8|Q6P0Q8-2 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27815.27815.3 18.72 18.72 3.372 5 1 1 0 858.0469 2492.1666 S806s TMT10 798 (K) AEFIPQLEsEDDTSYFDTR (S) AEFIPQLES(0.99)EDDT(0.0)S(0.0)Y(0.0)FDT(0.0)R s:Phosphorylated S MAST2 197687.5 3 45 121.1 549.41 HUMAN 1 6.4072 2.5637 EFKMDNFSPKAGTSK-p Q9NS56;S81-p EFKMDNFSPKAGTSK 0.177540019132473 0.162017860050926 -0.262666666666667 -0.323333333333333 14.8796119877203 10.3939379638025 -0.262666666666667 -0.323333333333333 0.0325116342999309 0.0913284745261888 -2.85590264905428 -2.04937602370199 Q9NS56 TOPORS Q9NS56.S81.p_TOPORS Q9NS56_S81s _1_1_81_81 Q9NS56 Q9NS56|Q9NS56-2 E3 ubiquitin-protein ligase Topors HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18696.18696.3 11.88 8.38 99 1 1 1 0 670.6844 1930.0711 S81s TMT10 74 (K) EFKMDNFsPK (A) EFKMDNFS(1.0)PK K:TMT10,s:Phosphorylated S TOPORS 120222.5 5 2 580.1 266.48 HUMAN 1 -14.8796 -10.3939 EFKNVSESPSKHENS-p Q8NEV8;S1709-p EFKNVSESPSKHENS 0.453917357011886 0.00387979257248964 0.122 -0.840333333333333 6.32885273014904 35.6059361333902 0.122 -0.840333333333333 0.232870634761965 0.000275046667062918 1.3429414142207 -8.31997627546543 Q8NEV8 EXPH5 Q8NEV8.S1709.p_EXPH5 Q8NEV8_S1709s _1_1_1709_1709 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4403.4403.4 12.76 12.76 1.139 4 1 1 0 553.2923 2130.1758 S1709s TMT10 1705 (K) NVSEsPSKHENSK (D) NVS(0.0)ES(0.99)PS(0.0)KHENS(0.0)K K:TMT10,s:Phosphorylated S EXPH5 223884.5 1 24 129.1 537.25 HUMAN 1 6.3289 -35.6059 EFKSLTDSLNDIKST-p Q5TKA1-2;S510-p EFKSLTDSLNDIKST 0.153999550537275 0.0192329301182961 -0.243333333333333 -0.342 16.3228840643038 23.5798894335781 -0.243333333333333 -0.342 0.0233190897305735 0.00438541862408524 -3.13043547656907 -4.68744440607904 Q5TKA1 LIN9 Q5TKA1.2.S510.p_LIN9 Q5TKA1-2_S510s _1_1_510_510 Q5TKA1-2 Q5TKA1-2|Q5TKA1-3|C9J5J4 Isoform 2 of Protein lin-9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18790.18790.3 8.35 7.25 3.823 3 1 1 0 548.6274 1563.8994 S510s TMT10 506 (K) SLTDsLNDIK (S) S(0.0)LT(0.0)DS(0.99)LNDIK K:TMT10,s:Phosphorylated S LIN9 64323.3 1 8 1238.1 163 HUMAN 1 -16.3229 -23.5799 EFLDLDNSPLSPPSP-p Q8NCF5;S198-p EFLDLDNSPLSPPSP 0.437896049613535 0.673244380026371 0.107 0.041 6.60382430922472 2.35024485932661 0.107 0.041 0.218583597335385 0.5820703991674 1.39147050054704 0.584968868947074 Q8NCF5 NFATC2IP Q8NCF5.S198.p_NFATC2IP Q8NCF5_S198s _1_1_198_198 Q8NCF5 Q8NCF5 NFATC2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20062.20062.4 10.98 10.98 3.013 4 1 1 0 727.9021 2828.6125 S198s TMT10 188 (K) KKTEFLDLDNsPLSPPSPR (T) KKT(0.0)EFLDLDNS(0.99)PLS(0.0)PPS(0.0)PR K:TMT10,s:Phosphorylated S NFATC2IP 45987.1 2 5 477.1 300.69 HUMAN 1 6.6038 2.3502 EFQDETDTEEETLYS-p O75976;T1370-p EFQDETDTEEETLYS 0.986625341798263 0.0138752131194156 -0.00333333333333335 0.837333333333333 0.119245797945289 25.7896012777304 -0.00333333333333335 0.837333333333333 0.972916167130456 0.00263657343639983 -0.0355494638495623 5.23976794610807 O75976 CPD O75976.T1370.p_CPD O75976_T1370t _1_1_1370_1370 O75976 O75976|O75976-2 Carboxypeptidase D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21453.21453.3 26.03 26.03 1.3 8 1 1 0 1042.8199 3046.4781 T1370t TMT10 1358 (K) SLLSHEFQDETDtEEETLYSSK (H) S(0.0)LLS(0.0)HEFQDET(0.0)DT(0.99)EEET(0.0)LY(0.0)S(0.0)S(0.0)K K:TMT10,t:Phosphorylated T CPD 154012.3 2 3 2250.1 91.39 HUMAN 1 -0.1192 25.7896 EFQKRDVSLGTYGSR-p Q9C0C2;S936-p EFQKRDVSLGTYGSR 0.530911027960293 0.00255239651556173 -0.096 -0.867 5.08741453603106 39.6303253515713 -0.096 -0.867 0.309926381959677 0.000108884851922615 -1.12005341614322 -9.96632096273952 Q9C0C2 TNKS1BP1 Q9C0C2.S936.p_TNKS1BP1 Q9C0C2_S936s _1_1_936_936 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13206.13206.2 11.12 6.88 2.141 4 1 1 0 682.3254 1283.6793 S936s TMT10 934 (R) DVsLGTYGSR (A) DVS(0.99)LGT(0.0)Y(0.0)GS(0.0)R s:Phosphorylated S TNKS1BP1 182819.3 1 36 4.1 2105.7 HUMAN 1 -5.0874 -39.6303 EFQYIGESQGYDIME-p P43246;S860-p EFQYIGESQGYDIME 0.293942250620987 0.100243248738758 0.174333333333333 0.266666666666667 10.0329289685032 13.2003030419353 0.174333333333333 0.266666666666667 0.0992446496978483 0.0478596695644773 1.98743193518531 2.54580129549841 P43246 MSH2 P43246.S860.p_MSH2 P43246_S860s _1_1_860_860 P43246 P43246|E9PHA6|P43246-2 DNA mismatch repair protein Msh2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31133.31133.5 24.33 21.7 2.767 3 1 1 0 726.1725 3546.8645 S860s TMT10 848 (K) ALELEEFQYIGEsQGYDIMEPAAKK (C) ALELEEFQY(0.0)IGES(0.99)QGY(0.0)DIMEPAAKK K:TMT10,s:Phosphorylated S MSH2 105482.9 3 4 2818.1 69.47 HUMAN 1 10.0329 13.2003 EFSAGAWSEPRKRSV-p Q8N6S5;S65-p EFSAGAWSEPRKRSV 0.58471981560589 0.353994396625303 0.0983333333333333 -0.226333333333333 4.28526975810322 5.97981946814141 0.0983333333333334 -0.226333333333333 0.372797528241314 0.252358567322462 0.971281333189328 -1.28066403859355 Q8N6S5 ARL6IP6 Q8N6S5.S65.p_ARL6IP6 Q8N6S5_S65s _1_1_65_65 Q8N6S5 Q8N6S5 ADP-ribosylation factor-like protein 6-interacting protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17369.17369.3 15.99 15.99 6.229 2 1 1 0 539.5825 1536.7644 S65s TMT10 57 (R) AEFSAGAWsEPR (K) AEFS(0.0)AGAWS(0.99)EPR s:Phosphorylated S ARL6IP6 24961.1 1 6 1404.1 146.21 HUMAN 1 4.2853 -5.9798 EFSGEPESLEVLIPE-p Q8IUY3;S199-p EFSGEPESLEVLIPE 0.209461411369469 0.104351248251473 -0.261666666666667 0.193333333333333 13.1076666181992 12.9669567842575 -0.261666666666667 0.193333333333333 0.0488914973520971 0.0505015050945268 -2.53048609448839 2.50374488007869 Q8IUY3 GRAMD2 Q8IUY3.S199.p_GRAMD2 Q8IUY3_S199s _1_1_199_199 Q8IUY3 Q8IUY3 GRAM domain-containing protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32439.32439.3 11.52 10.1 3.798 2 1 1 0 824.7513 2392.2722 S199s TMT10 192 (R) EFSGEPEsLEVLIPEMK (W) EFS(0.0)GEPES(0.99)LEVLIPEMK K:TMT10,s:Phosphorylated S GRAMD2A 40933.4 1 2 4155.1 36.55 HUMAN 1 -13.1077 12.967 EFSRRKRSKSEDMDN-p Q6VMQ6-4;S565-p EFSRRKRSKSEDMDN 0.0369271168076506 0.0504318281101793 -0.605 -0.257666666666667 32.8147784351592 17.3360715192541 -0.605 -0.257666666666667 0.000523024648749368 0.0184668511267942 -7.33639306978324 -3.32652521243633 Q6VMQ6 ATF7IP Q6VMQ6.4.S565.p_ATF7IP Q6VMQ6-4_S565s_1_1_565_565 Q6VMQ6-4 Q6VMQ6-4|Q6VMQ6-5|Q6VMQ6-2 Isoform 3 of Activating transcription factor 7-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6011.6011.4 8.47 8.47 1.364 3 1 1 0 538.5219 2055.0995 S565s M570m TMT10 565 (R) sKSEDmDNVQSK (R) S(0.99)KS(0.0)EDM(1.0)DNVQS(0.0)K K:TMT10,s:Phosphorylated S,m:Oxidized methionine ATF7IP 138346.3 17 10 273.1 392.91 HUMAN 1 -32.8148 -17.3361 EFSSGAKSPSKSGAQ-p P25054;S1360-p EFSSGAKSPSKSGAQ 0.134044328097277 0.068648699700851 -0.271666666666667 -0.287333333333333 17.9717544006538 15.4741662628926 -0.271666666666667 -0.287333333333333 0.0159523459702984 0.0283519786853904 -3.45655119071193 -2.96585272158982 P25054 APC P25054.S1360.p_APC P25054_S1360s _1_1_1360_1360 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12857.12857.2 14.28 14.28 1.109 4 1 1 0 1031.5624 1982.1526 S1360s TMT10 1351 (K) AVEFSSGAKsPSK (S) AVEFS(0.0)S(0.0)GAKS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S APC 313808.5 4 16 33.1 890.71 HUMAN 1 -17.9718 -15.4742 EFSVTMWSSDEKKDI-p P25490;S225-p EFSVTMWSSDEKKDI 0.51514462577286 0.0981046740712078 -0.127 0.214 5.31886646141838 13.3290373608091 -0.127 0.214 0.293841649887415 0.0464618249169897 -1.16218425671458 2.56907777895457 P25490 YY1 P25490.S225.p_YY1 P25490_S225s _1_1_225_225 P25490 P25490 Transcriptional repressor protein YY1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25071.25071.3 11.26 11.26 1.266 5 1 1 0 914.457 2661.4049 S225s TMT10 214 (K) TLEGEFSVTMWsSDEKK (D) T(0.0)LEGEFS(0.0)VT(0.0)MWS(0.99)S(0.0)DEKK K:TMT10,s:Phosphorylated S YY1 45168.2 1 3 1217.1 165.22 HUMAN 1 -5.3189 13.329 EFVSPCESGDNTGEP-p Q12888-2;S1710-p EFVSPCESGDNTGEP 0.573631485695544 0.0285989114629691 -0.083 0.441666666666667 4.44214958936978 20.905819850677 -0.083 0.441666666666667 0.359571317236944 0.00811741995769233 -1.00075825602648 4.07206983421836 Q12888 TP53BP1 Q12888.2.S1710.p_TP53BP1 Q12888-2_S1710s _1_1_1710_1710 Q12888-2 Q12888-2|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22270.22270.5 30.59 27.09 2.656 6 1 1 0 984.8985 4840.503 S1710s TMT10 1691 (K) SATVKPGAVGAGEFVSPCEsGDNTGEPSALEEQRGPLPLNK (T) S(0.0)AT(0.0)VKPGAVGAGEFVS(0.0)PCES(0.99)GDNT(0.0)GEPS(0.0)ALEEQRGPLPLNK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TP53BP1 216167.2 6 77 3.1 2297.07 HUMAN 1 -4.4421 20.9058 EFVSSDESSSGENKS-p Q08945;S671-p EFVSSDESSSGENKS 0.278970775596523 0.347311705624676 0.162333333333333 0.136333333333333 10.4811927970542 6.0880162864583 0.162333333333333 0.136333333333333 0.089511888588722 0.246149167538733 2.06544838021682 1.29991430947434 Q08945 SSRP1 Q08945.S671.p_SSRP1 Q08945_S671sS672s_2_2_671_672 Q08945 Q08945 FACT complex subunit SSRP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12214.12214.3 8.68 8.68 1.198 6 2 2 0 855.3978 2404.2447 S671s S672s TMT10 662 (K) SKEFVSSDEssSGENK (S) S(0.0)KEFVS(0.0)S(0.0)DES(0.99)S(0.99)S(0.0)GENK K:TMT10,s:Phosphorylated S SSRP1 81415.7 6 10 1270.1 159.97 HUMAN 1 10.4812 6.088 EFVTHNLSFDEINKA-p P11766;S351-p EFVTHNLSFDEINKA 0.485396607054784 0.0133025665153837 -0.126 0.367333333333333 5.78417591475951 26.0980872078068 -0.126 0.367333333333334 0.263986919698986 0.00245579029765042 -1.24601925111872 5.32034964528252 P11766 ADH5 P11766.S351.p_ADH5 P11766_S351s _1_1_351_351 P11766 P11766 Alcohol dehydrogenase class-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25307.25307.3 22.65 22.65 6.92 2 1 1 0 815.7431 2365.244 S351s TMT10 342 (K) VDEFVTHNLsFDEINK (A) VDEFVT(0.0)HNLS(0.99)FDEINK K:TMT10,s:Phosphorylated S ADH5 40579.3 4 2 3445.1 50.78 HUMAN 1 -5.7842 26.0981 EFWFSDGSLSDKSKC-p Q9P2F8;S1552-p EFWFSDGSLSDKSKC 0.942896336607154 0.624759633601568 -0.017 0.0643333333333334 0.502965901534318 2.77890545222336 -0.017 0.0643333333333334 0.890642489205086 0.527362755351475 -0.144091641926081 0.675045437296576 Q9P2F8 SIPA1L2 Q9P2F8.S1552.p_SIPA1L2 Q9P2F8_S1549sS1552s_2_2_1549_1552 Q9P2F8 Q9P2F8 Signal-induced proliferation-associated 1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29622.29622.2 10.32 10.32 2.752 3 2 2 0 960.8894 1760.8329 S1549s S1552s Hydrogen 1544 (R) NEFWFsDGsLSDK (S) NEFWFS(0.99)DGS(0.99)LS(0.0)DK K:TMT10-Lys-Only,s:Phosphorylated S SIPA1L2 192488.1 1 19 322.1 363.46 HUMAN 1 -0.503 2.7789 EFYTKGMTPVQDKEE-p Q04656-3;T557-p EFYTKGMTPVQDKEE 0.449308497040531 0.0277903709809549 -0.196666666666667 -0.39 6.41880073592362 21.0909264146247 -0.196666666666667 -0.39 0.228097185434007 0.00777870601989575 -1.35884246990824 -4.11296598547532 Q04656 ATP7A Q04656.3.T557.p_ATP7A Q04656-3_T557t _1_1_557_557 Q04656-3 Q04656-3|Q04656-2 Isoform 2 of Copper-transporting ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11159.11159.3 9.01 9.01 99 1 1 1 0 696.0347 2006.1195 T557t TMT10 555 (K) GMtPVQDKEEGK (N) GMT(1.0)PVQDKEEGK K:TMT10,t:Phosphorylated T ATP7A 173615 1 7 1241.1 162.93 HUMAN 1 -6.4188 -21.0909 EGAANMGTPMMPDNG-p Q8WXF1;T453-p EGAANMGTPMMPDNG 0.723080534443345 0.20794124040999 0.0516666666666667 0.131333333333333 2.6635486801577 8.97253990398384 0.0516666666666667 0.131333333333333 0.541558194883729 0.126691071605237 0.651205661374999 1.80296286584047 Q8WXF1 PSPC1 Q8WXF1.T453.p_PSPC1 Q8WXF1_T453t_1_1_453_453 Q8WXF1 Q8WXF1 Paraspeckle component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22252.22252.5 10.99 10.99 0 5 1 1 0 1117.1044 5484.5134 T453t M456m N464n TMT10 430 (R) ATIPGPPMGPGPAMGPEGAANMGtPMmPDNGAVHnDRFPQGPPSQMGSPMGSR (T) AT(0.0)IPGPPM(0.0)GPGPAM(0.0)GPEGAAN(0.0)M(0.0)GT(0.99)PM(0.0)M(0.50)PDN(0.50)GAVHN(0.50)DRFPQGPPS(0.0)QM(0.50)GS(0.0)PM(0.0)GS(0.0)R t:Phosphorylated T,m:Oxidized methionine,n:Deamidated PSPC1 58856.7 29 3 1850.1 111.09 HUMAN 1 2.6635 8.9725 EGADQKMSSPEDDSD-p Q15424;S383-p EGADQKMSSPEDDSD 0.545359440222621 0.482779498170064 -0.0826666666666667 0.069 4.86046286172982 4.220855206031 -0.0826666666666667 0.069 0.326553026997483 0.378368069720832 -1.07842406627316 0.958948723762274 Q15424 SAFB Q15424.S383.p_SAFB Q15424_S383s _1_1_383_383 Q15424 Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8896.8896.3 18.76 18.76 1.209 8 1 1 0 1033.4717 3018.43 S383s TMT10 371 (K) ESSTSEGADQKMsSPEDDSDTK (R) ES(0.0)S(0.0)T(0.0)S(0.0)EGADQKMS(0.99)S(0.0)PEDDS(0.0)DT(0.0)K K:TMT10,s:Phosphorylated S SAFB 103096.3 5 27 83.1 629.62 HUMAN 1 -4.8605 4.2209 EGAEINKSLLALKEC-p Q99661;S519-p EGAEINKSLLALKEC 0.540716629644627 0.0478371991976532 0.0853333333333333 -0.495666666666667 4.92697507285735 17.6591636380569 0.0853333333333333 -0.495666666666667 0.321589968180817 0.0171428741225599 1.09065875091253 -3.39090206384674 Q99661 KIF2C Q99661.S519.p_KIF2C Q99661_S519s _1_1_519_519 Q99661 Q99661|Q99661-2 Kinesin-like protein KIF2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24116.24116.3 16.83 16.83 99 1 1 1 0 762.1035 2204.3291 S519s TMT10 511 (R) MEGAEINKsLLALK (E) MEGAEINKS(1.0)LLALK K:TMT10,s:Phosphorylated S KIF2C 82224.4 4 2 3246.1 56.11 HUMAN 1 4.927 -17.6592 EGAELVDSVLDVVRK-p P07437;S115-p EGAELVDSVLDVVRK 0.533929938978611 0.0247184382771524 0.092 0.369 5.04585106674793 21.8737314829363 0.092 0.369 0.312906722269094 0.00649571335113805 1.11245396678471 4.28861295115273 P07437 TUBB P07437.S115.p_TUBB P07437_S115s _1_1_115_115 P07437 A0A0B4J269|Q13509|Q13885|Q9BVA1|P68371|P07437|Q5JP53|Q13509-2 Tubulin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26114.26114.4 23.57 23.57 11.357 3 1 1 0 657.0994 2545.4026 S115s TMT10 104 (K) GHYTEGAELVDsVLDVVRK (E) GHY(0.0)T(0.0)EGAELVDS(0.99)VLDVVRK K:TMT10,s:Phosphorylated S TUBB 50126.4 1 8 333.1 357.15 HUMAN 1 5.0459 21.8737 EGAGTSISEPPSPIS-p Q9NZJ0;S619-p EGAGTSISEPPSPIS 0.659595024833796 0.00219928027114295 0.0716666666666667 -0.854666666666667 3.38998888673966 41.2452006484455 0.0716666666666667 -0.854666666666667 0.458143059065734 7.50723369139342e-05 0.798568968196583 -10.705864911861 Q9NZJ0 DTL Q9NZJ0.S619.p_DTL Q9NZJ0_S619sS623s_2_2_619_623 Q9NZJ0 Q9NZJ0|F5GZ90 Denticleless protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27093.27093.4 20.07 20.07 3.337 12 2 2 0 1366.9193 5304.7045 S619s S623s TMT10 608 (K) SSKIEGAGTSIsEPPsPISPYASESCGTLPLPLRPCGEGSEMVGK (E) S(0.0)S(0.0)KIEGAGT(0.0)S(0.0)IS(0.99)EPPS(0.99)PIS(0.0)PY(0.0)AS(0.0)ES(0.0)CGT(0.0)LPLPLRPCGEGS(0.0)EMVGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DTL 80892.7 8 18 461.1 305.23 HUMAN 1 3.39 -41.2452 EGALLPQTPPSPRNL-p Q86X27;T326-p EGALLPQTPPSPRNL 0.651336999912061 0.224404509261229 0.0736666666666667 0.121333333333333 3.48921548048896 8.5468544194488 0.0736666666666667 0.121333333333333 0.447794187439542 0.139738011239576 0.818140348894026 1.72933126500358 Q86X27 RALGPS2 Q86X27.T326.p_RALGPS2 Q86X27_T326t _1_1_326_326 Q86X27 Q86X27|Q86X27-3 Ras-specific guanine nucleotide-releasing factor RalGPS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18851.18851.3 21.59 20.45 3.624 3 1 1 0 667.3527 1920.0752 T326t TMT10 315 (K) SVAAEGALLPQtPPSPR (N) S(0.0)VAAEGALLPQT(0.99)PPS(0.0)PR t:Phosphorylated T RALGPS2 65508.3 7 6 614.1 261.34 HUMAN 1 3.4892 8.5469 EGALSRVSDESLSKV-p Q08357;S256-p EGALSRVSDESLSKV 0.0608497647854506 0.0245954091916665 0.484 -0.326666666666667 26.5692726737596 21.9019655423192 0.484 -0.326666666666667 0.00220329542477485 0.00645362083122298 5.45252341507672 -4.2950314781809 Q08357 SLC20A2 Q08357.S256.p_SLC20A2 Q08357_S256s _1_1_256_256 Q08357 Q08357 Sodium-dependent phosphate transporter 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20710.20710.4 13.94 12.62 1.334 5 1 1 0 840.6995 3279.8039 S256s TMT10 249 (K) EGALSRVsDESLSKVQEAESPVFK (E) EGALS(0.0)RVS(0.99)DES(0.0)LS(0.0)KVQEAES(0.0)PVFK K:TMT10,s:Phosphorylated S SLC20A2 70904.6 4 1 2608.1 76.8 HUMAN 1 26.5693 -21.902 EGASLELSDDDTESK-p P35580-4;S1987-p EGASLELSDDDTESK 0.346079940403512 0.0378265919437746 0.128 0.264 8.56276846280859 19.0984281682257 0.128 0.264 0.139226900125714 0.0123071411967385 1.73267475577805 3.68482765630785 P35580 MYH10 P35580.4.S1987.p_MYH10 P35580-4_S1987s _1_1_1987_1987 P35580-4 P35580-4|P35580-3|P35580-2|P35580-5 Isoform 4 of Myosin-10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20080.20284.3 26.52 26.52 4.708 4 1 1 0 875.7619 2545.3034 S1987s TMT10 1976 (R) QLHLEGASLELsDDDTESK (T) QLHLEGAS(0.0)LELS(0.99)DDDT(0.0)ES(0.0)K K:TMT10,s:Phosphorylated S MYH10 233493.8 23 43 296.2 379.15 HUMAN 1 8.5628 19.0984 EGDDDAVSLLQEKEI-p F5GXV7;S2139-p EGDDDAVSLLQEKEI 0.689535041062173 0.00680825242509749 -0.0973333333333333 0.516333333333333 3.02575851843372 31.0974892491733 -0.0973333333333334 0.516333333333333 0.498223430996386 0.000776696011709927 -0.725639304862324 6.76187489938186 F5GXV7 NotFound F5GXV7.S2139.p_NotFound F5GXV7_S2139s _1_1_2139_2139 F5GXV7 F5GXV7|Q8NFP9|A0A0D9SF28|Q5T321 Neurobeachin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.31012.31012.3 23.83 23.83 5.651 3 1 1 0 1200.2573 3518.7936 S2139s TMT10 2117 (R) SQAIVNQNAETELMLEGDDDAVsLLQEK (E) S(0.0)QAIVNQNAET(0.0)ELMLEGDDDAVS(0.99)LLQEK K:TMT10,s:Phosphorylated S NBEA 330412.2 2 7 2242.1 92.01 HUMAN 1 -3.0258 31.0975 EGDDDTLSSVDEKDL-p P50851;S2064-p EGDDDTLSSVDEKDL 0.351485099137188 0.031641642559143 -0.193 0.383666666666667 8.439460565863 20.2556365490116 -0.193 0.383666666666667 0.143236580137866 0.009428364090202 -1.7113230739164 3.93029088270027 P50851 LRBA P50851.S2064.p_LRBA P50851_T2062tS2064s_2_2_2062_2064 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25059.25059.5 10.61 10.61 1.147 5 2 2 0 728.5347 3478.7073 T2062t S2064s TMT10 2042 (R) SQALGNQNSENEILLEGDDDtLsSVDEK (D) S(0.0)QALGNQNS(0.0)ENEILLEGDDDT(0.99)LS(0.99)S(0.0)VDEK K:TMT10,t:Phosphorylated T,s:Phosphorylated S LRBA 321783.7 4 31 74.1 649.16 HUMAN 1 -8.4395 20.2556 EGDEEGPSGASEEED-p Q96DX7;S336-p EGDEEGPSGASEEED 0.202255091053404 0.0199261352687015 -0.191666666666667 0.366 13.4689997657104 23.3202689219072 -0.191666666666667 0.366 0.0449883456726476 0.00465557264599489 -2.59593160372536 4.62527568764987 Q96DX7 TRIM44 Q96DX7.S336.p_TRIM44 Q96DX7_S336sS339s_2_2_336_339 Q96DX7 Q96DX7 Tripartite motif-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13354.13354.4 21.69 21.69 2.613 6 2 2 0 939.639 3595.5931 S336s S339s TMT10 315 (K) EQLDTSNESAEPKAEGDEEGPsGAsEEEDT (-) EQLDT(0.0)S(0.0)NES(0.0)AEPKAEGDEEGPS(0.99)GAS(0.99)EEEDT(0.0) K:TMT10,s:Phosphorylated S TRIM44 39042.1 2 2 4999.1 24.01 HUMAN 1 -13.469 23.3203 EGDIKAPSLDIKGPE-p Q09666;S3326-p EGDIKAPSLDIKGPE 0.243388788337884 0.0926667841368653 -0.386666666666667 0.311333333333333 11.7336902289206 13.6626417259951 -0.386666666666667 0.311333333333333 0.0670858577708948 0.043026480944484 -2.28518581505173 2.62965342862913 Q09666 AHNAK Q09666.S3326.p_AHNAK Q09666_S3326s _1_1_3326_3326 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21399.21399.4 15.1 15.1 5.457 2 1 1 0 619.8464 2396.4004 S3326s TMT10 3324 (K) APsLDIKGPEVDVSGPK (L) APS(0.99)LDIKGPEVDVS(0.0)GPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 80 1.1 4313.36 HUMAN 1 -11.7337 13.6626 EGDLQFPSPKISSSP-p B2RTY4-5;S1122-p EGDLQFPSPKISSSP 0.882809426951781 0.0730386975623503 -0.0226666666666667 0.222333333333333 1.0676769128943 15.0934958452723 -0.0226666666666667 0.222333333333333 0.78204601740914 0.0309492704057535 -0.290769364622618 2.89410188025416 B2RTY4 MYO9A B2RTY4.5.S1122.p_MYO9A B2RTY4-5_S1122s _1_1_1122_1122 B2RTY4-5 B2RTY4-4|B2RTY4-2|H3BRD5|B2RTY4-5|H3BMM1 Isoform 5 of Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25837.25837.4 21.32 14.71 19.681 4 1 1 0 711.6313 2763.5383 S1122s TMT10 1106 (K) SKLESVISDEGDLQFPsPK (I) S(0.0)KLES(0.0)VIS(0.0)DEGDLQFPS(0.99)PK K:TMT10,s:Phosphorylated S MYO9A 267577.4 3 11 457.1 306.95 HUMAN 1 -1.0677 15.0935 EGDLTGPSVGVEVPD-p Q09666;S1888-p EGDLTGPSVGVEVPD 0.704571607940758 0.0607630700501864 -0.068 0.339333333333333 2.85898670293505 16.2051677032986 -0.068 0.339333333333333 0.517727614207134 0.0239598022691546 -0.691622428609203 3.105455126388 Q09666 AHNAK Q09666.S1888.p_AHNAK Q09666_S1888s _1_1_1888_1888 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29504.29504.4 16.63 13.66 2.525 2 1 1 0 791.6458 3083.5859 S1888s TMT10 1880 (K) LEGDLTGPsVGVEVPDVELECPDAK (L) LEGDLT(0.0)GPS(0.99)VGVEVPDVELECPDAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 62 1.1 4313.36 HUMAN 1 -2.859 16.2052 EGDNGMDSDMEEEAD-p Q9H8G2;S203-p EGDNGMDSDMEEEAD 0.837053387289676 0.0993391133776277 -0.0343333333333333 0.177 1.4936565041719 13.2526532569766 -0.0343333333333333 0.177 0.708980596632879 0.0472862282580759 -0.393500759838785 2.55526025334734 Q9H8G2 CAAP1 Q9H8G2.S203.p_CAAP1 Q9H8G2_S203s _1_1_203_203 Q9H8G2 Q9H8G2|Q9H8G2-2 Caspase activity and apoptosis inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20847.20847.2 20.81 20.81 8.996 2 1 1 0 1398.0896 2715.2013 S203s TMT10 194 (K) ILEGDNGMDsDMEEEADDGSK (M) ILEGDNGMDS(0.99)DMEEEADDGS(0.0)K K:TMT10,s:Phosphorylated S CAAP1 38994.8 9 3 3116.1 60.32 HUMAN 1 -1.4937 13.2527 EGDRALLSPQYMVPD-p Q5SXM2;S561-p EGDRALLSPQYMVPD 0.987541600775548 0.64645446915406 0.00299999999999999 0.0573333333333333 0.109916854668655 2.58274446424702 0.00299999999999998 0.0573333333333333 0.975008303994733 0.551728671747117 0.0328021689120823 0.634227382483663 Q5SXM2 SNAPC4 Q5SXM2.S561.p_SNAPC4 Q5SXM2_S561s _1_1_561_561 Q5SXM2 Q5SXM2 snRNA-activating protein complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36745.36745.3 27.22 27.22 5.249 2 1 1 0 837.7518 2431.2715 S561s TMT10 558 (R) ALLsPQYMVPDMDLWVPAR (Q) ALLS(0.99)PQY(0.0)MVPDMDLWVPAR s:Phosphorylated S SNAPC4 160228.7 2 2 1272.1 159.49 HUMAN 1 0.1099 2.5827 EGDRSEGSGQENENE-p Q58WW2-3;S941-p EGDRSEGSGQENENE 0.919774718344234 0.0569149053499529 -0.0153333333333333 0.221666666666667 0.710241872809076 16.5874371502213 -0.0153333333333333 0.221666666666667 0.849133182713696 0.0219409933083207 -0.199528217427272 3.17946332760899 Q58WW2 DCAF6 Q58WW2.3.S941.p_DCAF6 Q58WW2-3_S941s _1_1_941_941 Q58WW2-3 Q58WW2-3|Q58WW2-4|Q58WW2-2 Isoform 3 of DDB1- and CUL4-associated factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5435.5435.3 17.67 17.67 1.135 2 1 1 0 925.3805 2694.156 S941s TMT10 930 (R) ADRLEGDRSEGsGQENENEDEE (-) ADRLEGDRS(0.0)EGS(0.99)GQENENEDEE s:Phosphorylated S DCAF6 107567.4 3 4 2596.1 77.25 HUMAN 1 -0.7102 16.5874 EGDSDVDSELEDRVD-p Q92614;S1974-p EGDSDVDSELEDRVD 0.624536609141361 0.114723540358427 0.077 0.176333333333333 3.80027650407837 12.4034847024228 0.077 0.176333333333333 0.416842843318385 0.0574978399657303 0.878754453620855 2.402866188132 Q92614 MYO18A Q92614.S1974.p_MYO18A Q92614_S1970sS1974s_2_2_1970_1974 Q92614 Q92614|Q92614-2 Unconventional myosin-XVIIIa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20151.20151.5 15.88 14.29 99 2 2 2 0 634.1103 3006.5835 S1970s S1974s TMT10 1964 (K) NKLEGDsDVDsELEDRVDGVK (S) NKLEGDS(1.0)DVDS(1.0)ELEDRVDGVK K:TMT10,s:Phosphorylated S MYO18A 234309.1 3 17 783.1 225.59 HUMAN 1 3.8003 12.4035 EGDSEKESEKSDGDP-p Q8TAQ2;S810-p EGDSEKESEKSDGDP 0.1560557092084 0.00238856624082869 -0.388666666666667 0.769 16.1944690026842 40.2369042944264 -0.388666666666667 0.769 0.0240188992096854 9.46911891539773e-05 -3.10561995954146 10.2384357800303 Q8TAQ2 SMARCC2 Q8TAQ2.S810.p_SMARCC2 Q8TAQ2_S806sS810sS813s_3_3_806_813 Q8TAQ2 Q8TAQ2|Q8TAQ2-3|Q8TAQ2-2 SWI/SNF complex subunit SMARCC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14875.14875.5 8.3 7.5 99 3 3 3 0 772.9758 3620.9516 S806s S810s S813s TMT10 801 (K) GKEGDsEKEsEKsDGDPIVDPEK (E) GKEGDS(1.0)EKES(1.0)EKS(1.0)DGDPIVDPEK K:TMT10,s:Phosphorylated S SMARCC2 133276.4 2 16 499.1 292.05 HUMAN 1 -16.1945 40.2369 EGDVLRRSEEHSPPR-p Q8IXT5;S250-p EGDVLRRSEEHSPPR 0.24047106331053 0.0563514938439415 -0.441666666666667 0.761333333333333 11.830470393013 16.6439336422126 -0.441666666666667 0.761333333333333 0.0656074201749434 0.0216574158578717 -2.3023003981468 3.19046202038268 Q8IXT5 RBM12B Q8IXT5.S250.p_RBM12B Q8IXT5_S250sS254s_2_2_250_254 Q8IXT5 Q8IXT5|B9ZVT1 RNA-binding protein 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6726.6726.5 7.8 4.24 99 2 2 2 0 542.4564 2548.3178 S250s S254s TMT10 243 (K) EGDVLRRsEEHsPPRGINDR (H) EGDVLRRS(1.0)EEHS(1.0)PPRGINDR s:Phosphorylated S RBM12B 118442.9 1 13 384.1 333.8 HUMAN 1 -11.8305 16.6439 EGEDDRDSANGEDDS-p P07910-2;S286-p EGEDDRDSANGEDDS 0.871909504018111 0.250441300337034 0.044 0.54 1.16588819901922 7.9224666415871 0.044 0.54 0.764559308309211 0.161344191765618 0.31498728150551 1.62119908626806 P07910 HNRNPC P07910.2.S286.p_HNRNPC P07910-2_S286s _1_1_286_286 P07910-2 P07910|G3V2Q1|P07910-2|G3V4C1|P07910-4|P07910-3 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17029.17029.3 13.85 11.32 1.602 2 1 1 0 1326.2428 3896.7318 S286s Hydrogen 263 (R) GDDQLELIKDDEKEAEEGEDDRDsANGEDDS (-) GDDQLELIKDDEKEAEEGEDDRDS(0.99)ANGEDDS(0.0) K:TMT10-Lys-Only,s:Phosphorylated S HNRNPC 32394 3 21 261.1 397.39 HUMAN 1 1.1659 7.9225 EGEDKEDSQPPTPVS-p J3KMZ8;S258-p EGEDKEDSQPPTPVS 0.128918631797654 0.0719128234737837 0.660333333333333 0.658 18.4236116010805 15.1943601931408 0.660333333333334 0.658 0.0143760256802291 0.0302387601805781 3.54850919450455 2.91305252320753 J3KMZ8 DPF2 J3KMZ8.S258.p_DPF2 J3KMZ8_S258sT262t_2_2_258_262 J3KMZ8 J3KMZ8|Q92785 Zinc finger protein ubi-d4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9376.9376.5 23.23 23.23 3.052 7 2 2 0 896.6145 4319.1118 S258s T262t TMT10 234 (K) NRPGLSYHYAHSHLAEEEGEDKEDsQPPtPVSQR (S) NRPGLS(0.0)Y(0.0)HY(0.0)AHS(0.0)HLAEEEGEDKEDS(0.99)QPPT(0.99)PVS(0.0)QR K:TMT10,s:Phosphorylated S,t:Phosphorylated T DPF2 46920.6 1 6 1300.1 156.5 HUMAN 1 18.4236 15.1944 EGEEAAETE______-p P43897-2;T345-p EGEEAAETE______ 0.347222085693526 0.171422382799368 0.225333333333333 0.272 8.53659125801513 10.0694646502728 0.225333333333333 0.272 0.140068627847705 0.0984132411135413 1.7281424105734 1.99296922020637 P43897 TSFM P43897.2.T345.p_TSFM P43897-2_T345t _1_1_345_345 P43897-2 P43897-2 Isoform 2 of Elongation factor Ts, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12938.12938.2 9.55 9.55 99 1 1 1 0 883.8402 1686.7002 T345t TMT10 334 (R) FECGEGEEAAEtE (-) FECGEGEEAAET(1.0)E C:Carbamidomethylation,t:Phosphorylated T TSFM 37997.9 1 2 4203.1 35.47 HUMAN 1 8.5366 10.0695 EGEEDEGSDSGDSED-p Q7KZ85;S73-p EGEEDEGSDSGDSED 0.471941186312508 0.0099286891041713 -0.232166666666667 0.490333333333333 6.01776559443847 28.1611182296909 -0.232166666666667 0.490333333333333 0.250163209759487 0.00152717278825657 -1.28772777812516 5.88299202471403 Q7KZ85 SUPT6H Q7KZ85.S73.p_SUPT6H Q7KZ85_S73sS75s_2_2_73_75 Q7KZ85 Q7KZ85|Q7KZ85-3 Transcription elongation factor SPT6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16503.16503.3 24.52 24.52 1.169 3 2 2 0 1282.8192 3686.4898 S73s S75s TMT10 56 (K) GFINDDDDEDEGEEDEGsDsGDSEDDVGHK (K) GFINDDDDEDEGEEDEGS(0.99)DS(0.99)GDS(0.0)EDDVGHK K:TMT10,s:Phosphorylated S SUPT6H 200324.3 2 16 279.1 388.92 HUMAN 2 -6.0178 28.1611 EGEEDSDSDYEISAK-p A2RRP1;S475-p EGEEDSDSDYEISAK 0.639552341806635 0.00714231278100688 0.092 0.461666666666667 3.62566383834024 30.7239797251107 0.092 0.461666666666667 0.433943928324692 0.000846451399717876 0.844862567810332 6.64458802920997 A2RRP1 NBAS A2RRP1.S475.p_NBAS A2RRP1_S473sS475s_2_2_473_475 A2RRP1 A2RRP1 Neuroblastoma-amplified sequence HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15086.15388.3 14.5 14.5 2.76 4 2 2 0 931.705 2633.1626 S473s S475s TMT10 463 (R) AGEEDEGEEDsDsDYEISAK (A) AGEEDEGEEDS(0.99)DS(0.99)DY(0.0)EIS(0.0)AK K:TMT10,s:Phosphorylated S NBAS 271875.5 1 6 2447.1 83.13 HUMAN 1 3.6257 30.724 EGEERAESEQEAYLR-p Q9NR28;S230-p EGEERAESEQEAYLR 0.554473387606353 0.00381634290486852 0.134 0.636333333333333 4.72883684361814 35.8371515475284 0.134 0.636333333333333 0.336601708213593 0.000260786343576267 1.054123270953 8.40756273035679 Q9NR28 DIABLO Q9NR28.S230.p_DIABLO Q9NR28_S230s _1_1_230_230 Q9NR28 Q9NR28 Diablo homolog, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10170.10170.3 17.38 17.38 7.305 3 1 1 0 903.0586 2627.1906 S230s TMT10 220 (K) TQEEGEERAEsEQEAYLRED (-) T(0.0)QEEGEERAES(0.99)EQEAY(0.0)LRED s:Phosphorylated S DIABLO 27358.5 2 1 4461.1 31.01 HUMAN 1 4.7288 35.8372 EGEETEGSEEDDKEN-p P49321-3;S482-p EGEETEGSEEDDKEN 0.358796058640274 0.0087641603005346 -0.146 0.686333333333333 8.27142880087941 29.1688730130394 -0.146 0.686333333333333 0.148887116809994 0.00121091232251758 -1.68221642335486 6.17375260233089 P49321 NASP P49321.3.S482.p_NASP P49321-3_T479tS482s_2_2_479_482 P49321-3 P49321-3|P49321-4 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17652.17652.4 12.8 12.8 5.292 4 2 2 0 1126.5138 4343.065 T479t S482s TMT10 475 (K) EGEEtEGsEEDDKENDKTEEMPNDSVLENK (S) EGEET(0.99)EGS(0.99)EEDDKENDKT(0.0)EEMPNDS(0.0)VLENK K:TMT10,t:Phosphorylated T,s:Phosphorylated S NASP 86552 2 30 87.1 626.46 HUMAN 1 -8.2714 29.1689 EGEETLESDDEKDEH-p Q8N6N3;S158-p EGEETLESDDEKDEH 0.738588185702362 0.225805630098638 0.0463333333333333 0.127 2.49699214532909 8.51170327098115 0.0463333333333333 0.127 0.562730928770399 0.140873619410241 0.616253605465017 1.72324960084854 Q8N6N3 C1orf52 Q8N6N3.S158.p_C1orf52 Q8N6N3_S158s _1_1_158_158 Q8N6N3 Q8N6N3 UPF0690 protein C1orf52 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16569.16569.4 23.89 23.89 1.208 4 1 1 0 792.8919 3088.5777 S158s TMT10 148 (R) LLPEGEETLEsDDEKDEHTSK (K) LLPEGEET(0.0)LES(0.99)DDEKDEHT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S C1orf52 20655.5 8 2 2796.1 70.25 HUMAN 1 2.497 8.5117 EGEEVGESSEEQDNA-p A0A1B0GTW1;S1126-p EGEEVGESSEEQDNA 0.7017758162987 0.290567454409063 0.0603333333333333 -0.109 2.89054174352227 7.08322362038008 0.0603333333333333 -0.109 0.513979533233747 0.195739122914791 0.698091034215949 -1.47516092637008 A0A1B0GTW1 NotFound A0A1B0GTW1.S1126.p_NotFound A0A1B0GTW1_S1126sS1127s_2_2_1126_1127 A0A1B0GTW1 Q9UDY2|Q9UDY2-3|Q9UDY2-6|A0A1B0GTW1|Q9UDY2-7 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21081.21713.4 20.68 20.68 20.231 5 2 2 0 985.733 3779.9794 S1126s S1127s TMT10 1107 (R) SILKPSTPIPPQEGEEVGEssEEQDNAPK (S) S(0.0)ILKPS(0.0)T(0.0)PIPPQEGEEVGES(0.99)S(0.99)EEQDNAPK K:TMT10,s:Phosphorylated S TJP2 141123.7 6 36 41.1 827.72 HUMAN 1 2.8905 -7.0832 EGEGGAESPGAESLR-p Q9BSE2;S41-p EGEGGAESPGAESLR 0.463034255771599 0.308666888119791 0.11 0.204666666666667 6.16997839961714 6.74789438952897 0.11 0.204666666666667 0.241547284818464 0.211451398116438 1.31478784457017 1.41642991263525 Q9BSE2 TMEM79 Q9BSE2.S41.p_TMEM79 Q9BSE2_S41s _1_1_41_41 Q9BSE2 Q9BSE2 Transmembrane protein 79 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8162.8162.3 18.01 18.01 8.386 2 1 1 0 660.6356 1899.9246 S41s TMT10 32 (R) QPEGEGGAEsPGAESLR (V) QPEGEGGAES(0.99)PGAES(0.0)LR s:Phosphorylated S TMEM79 44089.6 3 2 4378.1 32.36 HUMAN 1 6.17 6.7479 EGEPQEESPLKSKSQ-p Q9NYF8;S177-p EGEPQEESPLKSKSQ 0.500286296002367 0.0981153228066254 0.092 0.181666666666667 5.54531335152014 13.3281843702278 0.092 0.181666666666667 0.278912940822225 0.0464709513031006 1.20311772627173 2.56892337150083 Q9NYF8 BCLAF1 Q9NYF8.S177.p_BCLAF1 Q9NYF8_S177s _1_1_177_177 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|Q9NYF8-4|A0A1W2PQ43|E9PJA7 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9369.9369.3 18.55 13.41 5.3 2 1 1 0 885.1588 2573.4956 S177s TMT10 168 (K) KAEGEPQEEsPLKSK (S) KAEGEPQEES(0.99)PLKS(0.0)K K:TMT10,s:Phosphorylated S BCLAF1 106234.3 31 3 10.1 1293.04 HUMAN 1 5.5453 13.3282 EGERQPKSPGSTPTT-p P35658-3;S430-p EGERQPKSPGSTPTT 0.658761777508733 0.00351616489422878 -0.213 1.057 3.40204378804692 36.6675865384113 -0.213 1.057 0.456873134707046 0.000215397841121344 -0.80095309671964 8.72886268821911 P35658 NUP214 P35658.3.S430.p_NUP214 P35658-3_S430s _1_1_430_430 P35658-3 P35658-5|P35658-3|P35658-4|P35658-2 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8729.8729.2 15.97 12.23 3.842 8 1 1 0 1105.5583 2130.1443 S430s TMT10 430 (K) sPGSTPTTPTSSQAPQK (L) S(0.99)PGS(0.0)T(0.0)PT(0.0)T(0.0)PT(0.0)S(0.0)S(0.0)QAPQK K:TMT10,s:Phosphorylated S NUP214 214428.5 4 3 111.1 572.27 HUMAN 1 -3.402 36.6676 EGESAQHSDGESDFE-p Q7Z7L9;S172-p EGESAQHSDGESDFE 0.514113626120284 0.662768483113079 0.099 0.0493333333333333 5.33847552366061 2.44664156396256 0.099 0.0493333333333333 0.292517900465693 0.569292999769193 1.16573965304057 0.605513359556727 Q7Z7L9 ZSCAN2 Q7Z7L9.S172.p_ZSCAN2 Q7Z7L9_S172s _1_1_172_172 Q7Z7L9 Q7Z7L9|A0A0C4DFQ3|F8W6Y9|F5H3F3|F5GZ04 Zinc finger and SCAN domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19609.19609.4 12.95 12.95 1.104 4 1 1 0 859.1281 3353.5178 S172s TMT10 159 (K) IFSEMPEGESAQHsDGESDFERDAGIQR (L) IFS(0.0)EMPEGES(0.0)AQHS(0.99)DGES(0.0)DFERDAGIQR s:Phosphorylated S ZSCAN2 71315 1 91 240.51 415.72 HUMAN 1 5.3385 2.4466 EGFKANLSLLRRPGE-p P23246;S283-p EGFKANLSLLRRPGE 0.387145680990699 0.0373659250742016 0.138 -0.386333333333333 7.62396731856752 19.1811849872767 0.138 -0.386333333333333 0.172823687819084 0.0120748432394679 1.56985250928258 -3.70210100562843 P23246 SFPQ P23246.S283.p_SFPQ P23246_S283s _1_1_283_283 P23246 P23246|P23246-2 Splicing factor, proline- and glutamine-rich HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19024.19024.2 10.28 2.76 99 1 1 1 0 548.3103 1015.6461 S283s TMT10 280 (K) ANLsLLR (R) ANLS(1.0)LLR s:Phosphorylated S SFPQ 76262.2 2 5 1659.1 123.09 HUMAN 1 7.624 -19.1812 EGFSFKYSPGKLRGN-p P84157;S144-p EGFSFKYSPGKLRGN 0.148266672319898 0.0162143805621306 -0.475333333333333 -0.372 16.7541904959751 24.7185305302472 -0.475333333333333 -0.372 0.0211145072339043 0.00337401451798827 -3.21437603626092 -4.96673230721372 P84157 MXRA7 P84157.S144.p_MXRA7 P84157_S144s _1_1_144_144 P84157 Q6ZR64|P84157|P84157-3|P84157-2 Matrix-remodeling-associated protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18778.18778.5 20.46 20.46 1.79 5 1 1 0 637.7053 3104.5304 S144s TMT10 125 (K) GPSSEGPEEEDGEGFSFKYsPGK (L) GPS(0.0)S(0.0)EGPEEEDGEGFS(0.0)FKY(0.0)S(0.99)PGK K:TMT10,s:Phosphorylated S MXRA7 21522.4 6 1 3793.1 42.98 HUMAN 1 -16.7542 -24.7185 EGFSIPVSADGFKFG-p P49792;S1894-p EGFSIPVSADGFKFG 0.0564245771977522 0.012379974589777 -0.509333333333333 -0.711 27.2298656002476 26.621892308458 -0.509333333333333 -0.711 0.00189240218131609 0.00217676110707095 -5.63161969692695 -5.45923531702203 P49792 RANBP2 P49792.S1894.p_RANBP2 P49792_S1894s _1_1_1894_1894 P49792 P49792|Q99666 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27038.27038.3 9.19 9.19 9.194 2 1 1 0 631.3255 1811.9944 S1894s TMT10 1887 (K) EGFSIPVsADGFK (F) EGFS(0.0)IPVS(0.99)ADGFK K:TMT10,s:Phosphorylated S RANBP2 362585.9 1 37 9.1 1298.62 HUMAN 1 -27.2299 -26.6219 EGGAGAGSPDSFPAR-p Q96BJ3;S144-p EGGAGAGSPDSFPAR 0.795417288451216 0.0375004576947464 0.038 0.275666666666667 1.92102234608272 19.1594287715403 0.038 0.275666666666667 0.642536443937394 0.0121354845825606 0.491239956946994 3.69755587739897 Q96BJ3 AIDA Q96BJ3.S144.p_AIDA Q96BJ3_S144s _1_1_144_144 Q96BJ3 Q96BJ3 Axin interactor, dorsalization-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30146.30146.4 22.13 22.13 3.293 3 1 1 0 1123.531 4411.1415 S144s TMT10 120 (R) ILAPGEEENLEFEEDEEEGGAGAGsPDSFPARVPGTLLPR (L) ILAPGEEENLEFEEDEEEGGAGAGS(0.99)PDS(0.0)FPARVPGT(0.0)LLPR s:Phosphorylated S AIDA 35193.7 3 3 2219.1 92.95 HUMAN 1 1.921 19.1594 EGGAGDRSEEEASST-p Q9UGY1;S134-p EGGAGDRSEEEASST 0.886027178849554 0.277048286172415 -0.022 -0.110333333333333 1.03002772140009 7.34413254507345 -0.022 -0.110333333333333 0.788855082270868 0.184326062301319 -0.281393697120691 -1.5206863973249 Q9UGY1 NOL12 Q9UGY1.S134.p_NOL12 Q9UGY1_S134s _1_1_134_134 Q9UGY1 Q9UGY1 Nucleolar protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18827.18827.5 15.04 15.04 1.437 6 1 1 0 705.567 3443.8473 S134s TMT10 120 (R) LLGLTPPEGGAGDRsEEEASSTEKPTK (A) LLGLT(0.0)PPEGGAGDRS(0.99)EEEAS(0.0)S(0.0)T(0.0)EKPT(0.0)K K:TMT10,s:Phosphorylated S NOL12 24662.5 6 1 5954.1 15.04 HUMAN 1 -1.03 -7.3441 EGGAGGRSP______-p Q6UW78;S92-p EGGAGGRSP______ 0.846398595977906 0.0490434175340851 -0.0276666666666667 -0.237333333333333 1.40123212663786 17.5148061115241 -0.0276666666666667 -0.237333333333333 0.724230461208501 0.0177222716351398 -0.371701141206207 -3.36206892459838 Q6UW78 UQCC3 Q6UW78.S92.p_UQCC3 Q6UW78_S92s _1_1_92_92 Q6UW78 Q6UW78 Ubiquinol-cytochrome-c reductase complex assembly factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15842.15842.3 9.99 9.99 99 1 1 1 0 580.9296 1660.8063 S92s TMT10 79 (K) NWMVGGEGGAGGRsP (-) NWMVGGEGGAGGRS(1.0)P s:Phosphorylated S UQCC3 10080.5 1 1 6716.1 9.99 HUMAN 1 -1.4012 -17.5148 EGGEASVSPEKTSTT-p E7ETY2;S1378-p EGGEASVSPEKTSTT 0.862800750352503 0.036344566114668 -0.0256666666666667 -0.284666666666667 1.24994136869063 19.3754405323263 -0.0256666666666667 -0.284666666666667 0.749904333241003 0.0115466485379906 -0.335449649083971 -3.74281314527193 E7ETY2 TCOF1 E7ETY2.S1378.p_TCOF1 E7ETY2_S1378s _1_1_1378_1378 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12057.12057.4 23.1 23.1 1.205 7 1 1 0 690.8625 2680.4608 S1378s TMT10 1367 (K) LGAGEGGEASVsPEKTSTTSK (G) LGAGEGGEAS(0.0)VS(0.99)PEKT(0.0)S(0.0)T(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S TCOF1 152529.5 40 34 19.1 1034.65 HUMAN 1 -1.2499 -19.3754 EGGKTGKTPRRRAVS-p A8MYZ6;T177-p EGGKTGKTPRRRAVS 0.132031969629553 0.400593401263287 -0.333333333333333 -0.119666666666667 18.1575368760891 5.28271165385794 -0.333333333333333 -0.119666666666667 0.0152843267106115 0.296298078182713 -3.49421813095831 -1.15537844092518 A8MYZ6 NotFound A8MYZ6.T177.p_NotFound A8MYZ6_T174tT177tS184s_3_3_174_184 A8MYZ6 A8MYZ6 Forkhead box protein O6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8189.8189.3 8.69 0.37 99 3 3 3 0 930.4584 2532.476 T174t T177t S184s M185m N187n TMT10 174 (K) tGKtPRRRAVsmDnGAK (F) T(1.0)GKT(1.0)PRRRAVS(1.0)M(1.0)DN(1.0)GAK K:TMT10,t:Phosphorylated T,s:Phosphorylated S,m:Oxidized methionine,n:Deamidated FOXO6 50822.2 1 6 2524.1 80 HUMAN 1 -18.1575 -5.2827 EGGRYLCSGEGMFRR-p Q92622;S460-p EGGRYLCSGEGMFRR 0.313179859530122 0.892665266767967 -0.143333333333333 -0.0173333333333333 9.43216522255859 0.691697634276269 -0.143333333333333 -0.0173333333333333 0.1139681445268 0.852766706840014 -1.88320321555859 -0.194631083286235 Q92622 KIAA0226 Q92622.S460.p_KIAA0226 Q92622_S460s _1_1_460_460 Q92622 Q92622|Q92622-2|Q92622-3 Run domain Beclin-1-interacting and cysteine-rich domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19788.19788.2 7.87 7.87 7.87 2 1 1 0 764.8325 1448.6864 S460s TMT10 457 (R) YLCsGEGMFR (R) Y(0.0)LCS(0.99)GEGMFR C:Carbamidomethylation,s:Phosphorylated S RUBCN 110331.4 1 6 919.1 200.35 HUMAN 1 -9.4322 -0.6917 EGGSRKDSGQYEKDF-p Q6UB99;S1389-p EGGSRKDSGQYEKDF 0.0734745223162907 0.00119154670629161 -0.533 -1.309 24.335860437342 48.2605813131465 -0.533 -1.309 0.00368480030243785 1.49259460898821e-05 -4.87751345534544 -14.5527758743876 Q6UB99 ANKRD11 Q6UB99.S1389.p_ANKRD11 Q6UB99_S1389s _1_1_1389_1389 Q6UB99 Q6UB99 Ankyrin repeat domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7101.7101.5 8.95 5.12 8.725 4 1 1 0 703.9744 3435.8729 S1389s TMT10 1375 (K) EKGEDYKEGGSRKDsGQYEK (D) EKGEDY(0.0)KEGGS(0.0)RKDS(0.99)GQY(0.0)EK K:TMT10,s:Phosphorylated S ANKRD11 299790.8 1 16 340.1 353.72 HUMAN 1 -24.3359 -48.2606 EGGSRRLSLPGLLSQ-p Q96Q42;S483-p EGGSRRLSLPGLLSQ 0.802416252144599 0.0484416044615677 0.0423333333333333 0.258 1.84089814159961 17.5814976067789 0.0423333333333333 0.258 0.654500806197504 0.0174522023315074 0.473272222318585 3.37537543452292 Q96Q42 ALS2 Q96Q42.S483.p_ALS2 Q96Q42_S483s _1_1_483_483 Q96Q42 Q96Q42|Q96Q42-3 Alsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27749.27749.3 14.78 14.78 6.611 3 1 1 0 611.3504 1752.0693 S483s TMT10 481 (R) RLsLPGLLSQVSPR (L) RLS(0.99)LPGLLS(0.0)QVS(0.0)PR s:Phosphorylated S ALS2 185455.9 2 2 1001.1 189.97 HUMAN 1 1.8409 17.5815 EGGSYGFSLKTVQGK-p Q5T2W1;S148-p EGGSYGFSLKTVQGK 0.326502819643871 0.036668096049474 -0.196 -0.266333333333333 9.09869931168868 19.315559404589 -0.196 -0.266333333333333 0.123063728478749 0.0117069579801384 -1.82544969124607 -3.73023823784039 Q5T2W1 PDZK1 Q5T2W1.S148.p_PDZK1 Q5T2W1_S148s _1_1_148_148 Q5T2W1 Q5T2W1|Q5T2W1-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19494.19494.2 15.95 7.86 5.027 3 1 1 0 791.8976 1502.8255 S148s TMT10 141 (K) EGGSYGFsLK (T) EGGS(0.0)Y(0.0)GFS(0.99)LK K:TMT10,s:Phosphorylated S PDZK1 57413.6 1 6 1301.1 156.33 HUMAN 1 -9.0987 -19.3156 EGHSDDESDSEGSDS-p B4E0Y9;S326-p EGHSDDESDSEGSDS 0.996421434325015 0.0269650314960481 0.000666666666666658 0.421666666666667 0.0278754319989482 21.2984184812516 0.000666666666666659 0.421666666666667 0.993601999507517 0.00741580244625517 0.00839585411588934 4.15909448729606 B4E0Y9 NotFound B4E0Y9.S326.p_NotFound B4E0Y9_S326s _1_1_326_326 B4E0Y9 B4E0Y9|Q9P289|Q8NBY1|Q9P289-3 Serine/threonine-protein kinase 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4459.4459.4 20.1 17.96 2.21 8 1 1 0 798.8522 3112.4092 S326s TMT10 315 (K) RWKAEGHSDDEsDSEGSDSESTSR (E) RWKAEGHS(0.0)DDES(0.99)DS(0.0)EGS(0.0)DS(0.0)ES(0.0)T(0.0)S(0.0)R K:TMT10,s:Phosphorylated S STK26 49468.3 1 4 982.2 192.43 HUMAN 1 0.0279 21.2984 EGHVADGSATEMGTT-p Q15003;S201-p EGHVADGSATEMGTT 0.301590454921122 0.0795689704779547 -0.239666666666667 -0.194666666666667 9.76572797277561 14.5863724545926 -0.239666666666667 -0.194666666666667 0.105542457608759 0.0347826570352672 -1.94103664063621 -2.79946364780234 Q15003 NCAPH Q15003.S201.p_NCAPH Q15003_S201s _1_1_201_201 Q15003 Q15003|E9PHA2|Q15003-2 Condensin complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19720.19720.3 25.5 25.5 2.33 5 1 1 0 990.4722 2889.4188 S201s TMT10 186 (K) DAPSLEEVEGHVADGsATEMGTTK (K) DAPS(0.0)LEEVEGHVADGS(0.99)AT(0.0)EMGT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S NCAPH 83360.5 5 8 558.1 272.98 HUMAN 1 -9.7657 -14.5864 EGHVVLASPLKTGRK-p Q7L2J0;S254-p EGHVVLASPLKTGRK 0.792593719033847 0.00328132424303653 0.0446666666666667 -1.26 1.9475912132019 37.1893091209655 0.0446666666666667 -1.26 0.638617593177403 0.000191015710367309 0.497164202431139 -8.9362316470679 Q7L2J0 MEPCE Q7L2J0.S254.p_MEPCE Q7L2J0_S254s _1_1_254_254 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.26744.26744.3 24.1 20.6 7.589 5 1 1 0 1045.2025 3053.6229 S254s TMT10 234 (K) DITDPLSLNTCTDEGHVVLAsPLK (T) DIT(0.0)DPLS(0.0)LNT(0.0)CT(0.0)DEGHVVLAS(0.99)PLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MEPCE 74981.5 2 10 428.1 317.7 HUMAN 1 1.9476 -37.1893 EGISQESSEEEQ___-p P17096;S103-p EGISQESSEEEQ___ 0.233628206047255 0.191939926507772 0.1755 0.136166666666667 12.1192381321569 9.42416595470565 0.1755 0.136166666666667 0.0613869684762892 0.114178255836785 2.35350209901958 1.88110531325454 P17096 HMGA1 P17096.S103.p_HMGA1 P17096_S102sS103s_2_2_102_103 P17096 P17096|P17096-2 High mobility group protein HMG-I/HMG-Y HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12732.12732.2 15.11 15.11 4.732 3 2 2 0 1542.7129 2924.4827 S102s S103s TMT10 89 (K) KLEKEEEEGISQEssEEEQ (-) KLEKEEEEGIS(0.0)QES(0.99)S(0.99)EEEQ K:TMT10,s:Phosphorylated S HMGA1 11675.8 46 10 1152.1 172.09 HUMAN 2 12.1192 9.4242 EGIVKQDSLVINLNR-p Q9Y5B9;S650-p EGIVKQDSLVINLNR 0.593509589716007 0.00840850496211001 -0.0966666666666667 0.568333333333333 4.18040333781126 29.4721794720368 -0.0966666666666667 0.568333333333333 0.381908800572916 0.00112922907789459 -0.951460570306321 6.26342796908585 Q9Y5B9 SUPT16H Q9Y5B9.S650.p_SUPT16H Q9Y5B9_S650s _1_1_650_650 Q9Y5B9 Q9Y5B9 FACT complex subunit SPT16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20545.20545.3 15.44 15.44 99 1 1 1 0 746.0865 2156.2803 S650s TMT10 643 (K) EGIVKQDsLVINLNR (S) EGIVKQDS(1.0)LVINLNR K:TMT10,s:Phosphorylated S SUPT16H 120482.1 1 3 1519.1 134.4 HUMAN 1 -4.1804 29.4722 EGKAGVQSVGEKESL-p E7ERS3;S173-p EGKAGVQSVGEKESL 0.664425582516381 0.17911676536607 -0.112333333333333 0.225666666666667 3.32175923035138 9.82199931315847 -0.112333333333333 0.225666666666667 0.46539753314532 0.104183769975431 -0.785040716892614 1.95002880324349 E7ERS3 ZC3H18 E7ERS3.S173.p_ZC3H18 E7ERS3_S173s _1_1_173_173 E7ERS3 E7ERS3|Q86VM9|Q86VM9-2 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9094.9094.2 10.52 10.52 99 1 1 1 0 706.8806 1332.7887 S173s TMT10 169 (K) AGVQsVGEK (E) AGVQS(1.0)VGEK K:TMT10,s:Phosphorylated S ZC3H18 109165.8 1 9 157.1 499.97 HUMAN 1 -3.3218 9.822 EGKALAESWNAAFLE-p Q15382;S140-p EGKALAESWNAAFLE 0.196108777103915 0.392066904531956 -0.210666666666667 -0.0943333333333333 13.7826018473998 5.40596891775841 -0.210666666666667 -0.0943333333333333 0.0418542742079719 0.288007042989093 -2.65308990062106 -1.17770645454171 Q15382 RHEB Q15382.S140.p_RHEB Q15382_S140s _1_1_140_140 Q15382 Q15382|C9J931 GTP-binding protein Rheb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28616.28616.3 17.76 15.13 7.672 3 1 1 0 745.0465 2153.1643 S140s TMT10 136 (K) ALAEsWNAAFLESSAK (E) ALAES(0.99)WNAAFLES(0.0)S(0.0)AK K:TMT10,s:Phosphorylated S RHEB 20554.2 1 1 5602.1 17.76 HUMAN 1 -13.7826 -5.406 EGKGSKPSPLSVKNT-p Q96S94;S348-p EGKGSKPSPLSVKNT 0.975009344981545 0.920802265510344 0.00499999999999999 0.01 0.213216449172309 0.50401873817851 0.00499999999999999 0.01 0.952090770335888 0.890426601728532 0.0629177328559579 0.144364986064822 Q96S94 CCNL2 Q96S94.S348.p_CCNL2 Q96S94_S348s _1_1_348_348 Q96S94 Q96S94|A0A0A0MSF3|Q96S94-3 Cyclin-L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12660.12660.3 10.83 8.95 1.129 3 1 1 0 589.6844 1687.0721 S348s TMT10 344 (K) GSKPsPLSVK (N) GS(0.0)KPS(0.99)PLS(0.0)VK K:TMT10,s:Phosphorylated S CCNL2 58659.8 9 3 2007.1 102.73 HUMAN 1 0.2132 0.504 EGKIIKKSSGFSGKG-p A0A0C4DG89;S770-p EGKIIKKSSGFSGKG 0.780081591614552 0.396921744889465 -0.0673333333333334 0.116333333333333 2.07343749052314 5.33542579968578 -0.0673333333333334 0.116333333333333 0.620377803717432 0.29272338595806 -0.525004569306431 1.16493777089478 A0A0C4DG89 DDX46 A0A0C4DG89.S770.p_DDX46 A0A0C4DG89_S770s _1_1_770_770 A0A0C4DG89 A0A0C4DG89|Q7L014 Probable ATP-dependent RNA helicase DDX46 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8150.8653.2 8.47 8.47 8.471 3 1 1 0 604.3098 1127.6461 S770s TMT10 770 (K) sSGFSGK (G) S(0.99)S(0.0)GFS(0.0)GK K:TMT10,s:Phosphorylated S DDX46 117972.6 1 5 985.1 191.96 HUMAN 1 -2.0734 5.3354 EGKISTITPQIQAFN-p P30260-2;T452-p EGKISTITPQIQAFN 0.373228695696441 0.0211928939014201 -0.147666666666667 -0.468 7.93371300274069 22.8932406719816 -0.147666666666667 -0.468 0.160926920140085 0.00513660219242875 -1.62365943945015 -4.52419819144504 P30260 CDC27 P30260.2.T452.p_CDC27 P30260-2_T452t _1_1_452_452 P30260-2 P30260-2|G5EA36 Isoform 2 of Cell division cycle protein 27 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.28285.28285.3 15.03 15.03 2.467 3 1 1 0 747.4206 2160.2793 T452t TMT10 448 (K) ISTItPQIQAFNLQK (A) IS(0.0)T(0.0)IT(0.99)PQIQAFNLQK K:TMT10,t:Phosphorylated T CDC27 93694.6 1 9 1438.1 142.43 HUMAN 1 -7.9337 -22.8932 EGKKAEGSPNQGKKA-p Q9P2E9;S583-p EGKKAEGSPNQGKKA 0.324195658268258 0.00210285200041402 0.288 1.06233333333333 9.16171570417227 41.6444696650131 0.288 1.06233333333333 0.121290958921766 6.84783099687356e-05 1.83636035087579 10.8963296046653 Q9P2E9 RRBP1 Q9P2E9.S583.p_RRBP1 Q9P2E9_S583s _1_1_583_583 Q9P2E9 Q9P2E9|A0A0A0MRV0|Q9P2E9-2|A0A087WVV2 Ribosome-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6441.6441.5 10.71 5.15 2.977 3 1 1 0 643.1597 3131.8033 S583s TMT10 569 (K) KAEGSPSEGKKAEGsPNQGK (K) KAEGS(0.0)PS(0.0)EGKKAEGS(0.99)PNQGK K:TMT10,s:Phosphorylated S RRBP1 152868.9 3 11 479.1 299.08 HUMAN 1 9.1617 41.6445 EGKLGNGSGAGGILD-p Q9UPP1;S722-p EGKLGNGSGAGGILD 0.182356635635771 0.907119940995938 -0.439666666666667 0.0166666666666667 14.5394618809797 0.592898307969564 -0.439666666666667 0.0166666666666667 0.0351604003845035 0.872388976506518 -2.79251482193617 0.168377685071665 Q9UPP1 PHF8 Q9UPP1.S722.p_PHF8 Q9UPP1_S722s_1_1_722_722 Q9UPP1 Q9UPP1|Q9UPP1-2|Q9UPP1-3|Q9UPP1-4 Histone lysine demethylase PHF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.36511.36511.3 18.9 16.27 99 1 1 1 0 642.023 1843.1053 N720n S722s TMT10 718 (K) LGnGsGAGGILDLLK (A) LGN(1.0)GS(1.0)GAGGILDLLK K:TMT10,n:Deamidated,s:Phosphorylated S PHF8 118946 3 20 376.1 336.84 HUMAN 1 -14.5395 0.5929 EGKRSRRSLEGGGCP-p Q9Y613;S367-p EGKRSRRSLEGGGCP 0.265747257066887 0.251883647513995 -0.184 -0.253 10.9086502952273 7.88532089676355 -0.184 -0.253 0.0811213128316959 0.162730107120865 -2.14011319057098 -1.61475626552525 Q9Y613 FHOD1 Q9Y613.S367.p_FHOD1 Q9Y613_S367s _1_1_367_367 Q9Y613 Q9Y613 FH1/FH2 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3137.3137.2 14.55 11.04 99 1 1 1 0 542.2184 1003.4626 S367s Hydrogen 367 (R) sLEGGGCPAR (A) S(1.0)LEGGGCPAR C:Carbamidomethylation,s:Phosphorylated S FHOD1 127404.8 2 1 730.1 236 HUMAN 1 -10.9087 -7.8853 EGLARPVSPDSPEII-p Q9Y4B4;S1169-p EGLARPVSPDSPEII 0.159371893848093 0.110459719531907 -0.286333333333333 -0.201666666666667 15.9790939789483 12.6332134649342 -0.286333333333333 -0.201666666666667 0.0252400727357625 0.0545354189124578 -3.06417713813804 -2.44388334545983 Q9Y4B4 RAD54L2 Q9Y4B4.S1169.p_RAD54L2 Q9Y4B4_S1169s _1_1_1169_1169 Q9Y4B4 Q9Y4B4 Helicase ARIP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32843.32843.3 15.22 12.2 2.268 4 1 1 0 1224.6102 3591.8492 S1169s TMT10 1158 (K) APDPEGLARPVsPDSPEIISELQQYADVAAAR (E) APDPEGLARPVS(0.99)PDS(0.0)PEIIS(0.0)ELQQY(0.0)ADVAAAR s:Phosphorylated S RAD54L2 164135.1 1 2 1338.1 152.26 HUMAN 1 -15.9791 -12.6332 EGLDACASPTKSASA-p Q92618;S116-p EGLDACASPTKSASA 0.145777545982128 0.0011418699812441 -0.283666666666667 -1.12 17.0468173167845 48.8220995946418 -0.283666666666667 -1.12 0.0197386873595975 1.31156566991291e-05 -3.27186156946804 -14.91163598652 Q92618 ZNF516 Q92618.S116.p_ZNF516 Q92618_S116s _1_1_116_116 Q92618 Q92618 Zinc finger protein 516 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11124.11124.2 17.63 17.63 1.926 3 1 1 0 922.9469 1764.9202 S116s TMT10 107 (R) ASEGLDACAsPTK (S) AS(0.0)EGLDACAS(0.99)PT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF516 126397.9 2 1 3011.1 63.33 HUMAN 1 -17.0468 -48.8221 EGLGQGQSLEQLEAL-p Q9NSC5;S256-p EGLGQGQSLEQLEAL 0.601113862580168 0.0315949605156948 -0.118333333333333 0.278 4.08295151673872 20.2705486858788 -0.118333333333333 0.278 0.390575365929174 0.00939604593803965 -0.932953005460084 3.93351062927112 Q9NSC5 HOMER3 Q9NSC5.S256.p_HOMER3 Q9NSC5_S256s _1_1_256_256 Q9NSC5 Q9NSC5|Q9NSC5-2|Q9NSC5-5|M0QYF9 Homer protein homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.34546.34546.5 22.17 22.17 6.948 3 1 1 0 751.0067 3671.047 S256s TMT10 249 (K) EGLGQGQsLEQLEALVQTKDQEIQTLK (S) EGLGQGQS(0.99)LEQLEALVQT(0.0)KDQEIQT(0.0)LK K:TMT10,s:Phosphorylated S HOMER3 39835.6 5 5 1577.1 130.16 HUMAN 1 -4.083 20.2705 EGLPLPKTPEKRGDL-p P25685;T307-p EGLPLPKTPEKRGDL 0.505126453038306 0.248192961754145 -0.125333333333333 -0.120333333333333 5.47732129274643 7.97300830934141 -0.125333333333333 -0.120333333333333 0.283313892331197 0.159477408236348 -1.19085524798318 -1.62996310981808 P25685 DNAJB1 P25685.T307.p_DNAJB1 P25685_T307t _1_1_307_307 P25685 P25685|P25685-2 DnaJ homolog subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14010.14010.5 12.94 9.43 99 1 1 1 0 549.3346 2662.679 T307t TMT10 295 (R) RKVPGEGLPLPKtPEK (R) RKVPGEGLPLPKT(1.0)PEK K:TMT10,t:Phosphorylated T DNAJB1 38214.6 3 3 2903.1 66.41 HUMAN 1 -5.4773 -7.973 EGLRKAASLTEDRDR-p Q04637-9;S1216-p EGLRKAASLTEDRDR 0.0200803410167721 0.0812301932664422 1.74066666666667 0.616333333333333 39.5744490012509 14.4554849182656 1.74066666666667 0.616333333333333 0.000110294815837796 0.0358468920636461 9.9642962073575 2.77520614339315 Q04637 EIF4G1 Q04637.9.S1216.p_EIF4G1 Q04637-9_S1216s _1_1_1216_1216 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1|Q04637-4|E7EX73|Q04637-5|Q04637-7|Q04637-6 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6907.6907.2 9.09 3.89 1.136 2 1 1 0 764.91 1448.8473 S1216s TMT10 1213 (R) KAAsLTEDR (D) KAAS(0.99)LT(0.0)EDR K:TMT10,s:Phosphorylated S EIF4G1 176975.4 13 27 107.1 585.61 HUMAN 1 39.5744 14.4555 EGLSAPHTPVTPGAA-p Q96CC6;T180-p EGLSAPHTPVTPGAA 0.819226860557372 0.802133511068838 0.0473333333333333 -0.0246666666666667 1.66892093619752 1.33987400715766 0.0473333333333334 -0.0246666666666667 0.680938526129863 0.734535177392264 0.434166434608047 -0.35704900263919 Q96CC6 RHBDF1 Q96CC6.T180.p_RHBDF1 Q96CC6_T180t _1_1_180_180 Q96CC6 Q96CC6 Inactive rhomboid protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20055.20055.3 19.44 19.44 3.974 9 1 1 0 1099.8499 3217.5633 T180t TMT10 167 (R) VADDTAEGLSAPHtPVTPGAASLCSFSSSR (S) VADDT(0.0)AEGLS(0.0)APHT(0.99)PVT(0.0)PGAAS(0.0)LCS(0.0)FS(0.0)S(0.0)S(0.0)R C:Carbamidomethylation,t:Phosphorylated T RHBDF1 98996.6 1 4 1411.1 145.35 HUMAN 1 1.6689 -1.3399 EGLSLDASMHSQLRI-p O15440;S64-p EGLSLDASMHSQLRI 0.125098644620753 0.0247429756117273 0.275333333333333 -0.307 18.7784952428895 21.8578621451527 0.275333333333333 -0.307 0.0132480047669697 0.00651949243142552 3.62156737836889 -4.28500791850951 O15440 ABCC5 O15440.S64.p_ABCC5 O15440_S64s _1_1_64_64 O15440 O15440|O15440-5|F8WCY8|A5PKY6|O15440-2|O15440-3|O15440-4 Multidrug resistance-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15828.15828.3 15.76 15.76 3.154 3 1 1 0 641.9791 1843.9534 S64s TMT10 56 (R) AEGLSLDAsMHSQLR (I) AEGLS(0.0)LDAS(0.99)MHS(0.0)QLR s:Phosphorylated S ABCC5 161741.5 2 4 1666.1 122.51 HUMAN 1 18.7785 -21.8579 EGMFRRPSEGQSLIS-p Q92622;S469-p EGMFRRPSEGQSLIS 0.570084500523302 0.039676560984998 0.076 0.305666666666667 4.49106997350747 18.7949186234382 0.076 0.305666666666667 0.355543712293744 0.0131980004142115 1.00990908238453 3.62183503052385 Q92622 KIAA0226 Q92622.S469.p_KIAA0226 Q92622_S469s _1_1_469_469 Q92622 Q92622|Q92622-2|Q92622-3 Run domain Beclin-1-interacting and cysteine-rich domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.28774.28774.4 21.7 21.7 1.201 6 1 1 0 839.4064 3274.6302 S469s TMT10 467 (R) RPsEGQSLISYLSEQDFGSCADLEK (E) RPS(0.99)EGQS(0.0)LIS(0.0)Y(0.0)LS(0.0)EQDFGS(0.0)CADLEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RUBCN 110331.4 3 7 919.1 200.35 HUMAN 1 4.4911 18.7949 EGNHKRHSVVAGGGG-p Q6PKG0;S1040-p EGNHKRHSVVAGGGG 0.299858287292419 0.00663556839811996 -0.219666666666667 1.25333333333333 9.83072477404389 31.2982862062239 -0.219666666666667 1.25333333333333 0.103974663282612 0.000741602831613232 -1.95231602634577 6.82562363320072 Q6PKG0 LARP1 Q6PKG0.S1040.p_LARP1 Q6PKG0_S1040s _1_1_1040_1040 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3305.3305.3 10.11 10.11 99 1 1 1 0 535.6007 1524.8193 S1040s TMT10 1038 (K) RHsVVAGGGGGEGR (K) RHS(1.0)VVAGGGGGEGR s:Phosphorylated S LARP1 123907.4 2 62 28.1 931.95 HUMAN 1 -9.8307 31.2983 EGNPVRGSEEDSPKK-p O43719;S494-p EGNPVRGSEEDSPKK 0.853515833697351 0.028031763585221 0.0366666666666667 0.308 1.3329339550368 21.0355207269199 0.0366666666666667 0.308 0.735709907416804 0.00787857960196819 0.355425518957928 4.10069989629302 O43719 HTATSF1 O43719.S494.p_HTATSF1 O43719_S494s _1_1_494_494 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4289.4289.3 7.08 7.08 2.297 2 1 1 0 505.5875 1434.784 S494s Hydrogen 493 (R) GsEEDSPKK (E) GS(0.99)EEDS(0.0)PKK K:TMT10-Lys-Only,s:Phosphorylated S HTATSF1 86421.8 5 8 149.1 512 HUMAN 1 1.3329 21.0355 EGNSPQGSNQGVKIT-p P61006;S185-p EGNSPQGSNQGVKIT 0.142425591359505 0.885953774779424 -0.368333333333333 -0.015 17.2889133018556 0.739065788802815 -0.368333333333333 -0.015 0.0186684675758339 0.843516187082428 -3.31975714434349 -0.207061361745128 P61006 RAB8A P61006.S185.p_RAB8A P61006_S185s _1_1_185_185 P61006 P61006 Ras-related protein Rab-8A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8985.8985.3 18.52 18.52 6.953 2 1 1 0 770.7523 2230.2759 S185s TMT10 176 (K) KLEGNSPQGsNQGVK (I) KLEGNS(0.0)PQGS(0.99)NQGVK K:TMT10,s:Phosphorylated S RAB8A 23838.9 3 9 2008.4 102.72 HUMAN 1 -17.2889 -0.7391 EGPDAKLSGPSLKMP-p Q09666;S4900-p EGPDAKLSGPSLKMP 0.188030139811299 0.843704200839858 -0.243 -0.0253333333333333 14.2423682768728 1.03677489645451 -0.243 -0.0253333333333333 0.0376498432411773 0.787630472896903 -2.73752725178438 -0.283049734435521 Q09666 AHNAK Q09666.S4900.p_AHNAK Q09666_S4900s _1_1_4900_4900 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24583.24583.4 19.55 19.55 4.082 2 1 1 0 611.089 2361.3633 S4900s TMT10 4890 (R) LDFEGPDAKLsGPSLK (M) LDFEGPDAKLS(0.99)GPS(0.0)LK K:TMT10,s:Phosphorylated S AHNAK 629603.7 7 106 1.1 4313.36 HUMAN 1 -14.2424 -1.0368 EGPDVDVSLPKADID-p Q09666;S4803-p EGPDVDVSLPKADID 0.0365636657986741 0.185569323984581 -1.01233333333333 0.284333333333333 32.9399496988957 9.61995152810466 -1.01233333333333 0.284333333333333 0.000508165328228057 0.109145251815477 -7.37893574713081 1.91501038050604 Q09666 AHNAK Q09666.S4803.p_AHNAK Q09666_S4803s _1_1_4803_4803 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28175.28175.4 15.13 13.89 13.4 2 1 1 0 694.3693 2694.478 S4803s TMT10 4788 (K) FSMPGFKGEGPDVDVsLPK (A) FS(0.0)MPGFKGEGPDVDVS(0.99)LPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 103 1.1 4313.36 HUMAN 1 -32.9399 9.62 EGPESSPSPAGAVEK-p A4D1S0;S49-p EGPESSPSPAGAVEK 0.678073130027546 0.11222855891182 0.0576666666666667 -0.256333333333333 3.15781371007321 12.5322806468943 0.0576666666666667 -0.256333333333333 0.483302040789024 0.0558176997609203 0.752287755908295 -2.425843886805 A4D1S0 KLRG2 A4D1S0.S49.p_KLRG2 A4D1S0_S49s _1_1_49_49 A4D1S0 A4D1S0|A4D1S0-2 Killer cell lectin-like receptor subfamily G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10296.10296.4 9.26 9.26 1.182 3 1 1 0 615.8189 2380.2873 S49s TMT10 38 (K) VRQPEGPESSPsPAGAVEK (A) VRQPEGPES(0.0)S(0.0)PS(0.99)PAGAVEK K:TMT10,s:Phosphorylated S KLRG2 43534.4 4 2 945.1 197.69 HUMAN 1 3.1578 -12.5323 EGPGRAESKESVGSR-p Q66K74;S472-p EGPGRAESKESVGSR 0.260386657049657 0.0286107106633554 -0.308 0.318333333333333 11.0819274844239 20.9007850968077 -0.308 0.318333333333333 0.0779484083357758 0.00812683589828953 -2.17046858442407 4.07096083058129 Q66K74 MAP1S Q66K74.S472.p_MAP1S Q66K74_S472s _1_1_472_472 Q66K74 Q66K74|Q66K74-2 Microtubule-associated protein 1S HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20182.20386.4 15.73 15.73 4.414 2 1 1 0 716.6348 2783.5456 S472s TMT10 453 (R) FLREPVVTPQDLEGPGRAEsK (E) FLREPVVT(0.0)PQDLEGPGRAES(0.99)K K:TMT10,s:Phosphorylated S MAP1S 113179.3 4 2 456.1 307.14 HUMAN 1 -11.0819 20.9008 EGPLPKETAAGGLTL-p Q92797;T1231-p EGPLPKETAAGGLTL 0.26463240481466 0.0320849526179946 -0.285333333333333 0.347333333333333 10.9540306640236 20.1605761296309 -0.285333333333333 0.347333333333333 0.0802780719814187 0.00963701171751025 -2.14805782213332 3.90980067436664 Q92797 SYMPK Q92797.T1231.p_SYMPK Q92797_T1231t _1_1_1231_1231 Q92797 Q92797 Symplekin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17522.17522.5 18.39 11.52 1.128 6 1 1 0 1069.9688 5265.8083 T1231t TMT10 1230 (K) EtAAGGLTLKEERSPQTLAPVGEDAMKTPSPAAEDAREPEAK (G) ET(0.99)AAGGLT(0.0)LKEERS(0.0)PQT(0.0)LAPVGEDAMKT(0.0)PS(0.0)PAAEDAREPEAK K:TMT10,t:Phosphorylated T SYMPK 142001.7 7 8 808.1 221.39 HUMAN 1 -10.954 20.1606 EGPPKRVSLVGADDL-p A0A0G2JPP5;S1378-p EGPPKRVSLVGADDL 0.58592658655947 0.867337026195007 -0.1 -0.0166666666666666 4.26894920126844 0.870388227853911 -0.1 -0.0166666666666666 0.374201117281739 0.818391626572866 -0.968202893271881 -0.241019695990115 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1378.p_SCRIB A0A0G2JPP5_S1378s _1_1_1378_1378 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16375.16375.5 14.47 7.79 99 1 1 1 0 600.7479 2919.7347 S1378s TMT10 1367 (R) VPQAEGPPKRVsLVGADDLRK (M) VPQAEGPPKRVS(1.0)LVGADDLRK K:TMT10,s:Phosphorylated S SCRIB 178690.9 6 32 22.1 1004.81 HUMAN 1 -4.2689 -0.8704 EGPQQSLSGSPLQPI-p O15446-2;S128-p EGPQQSLSGSPLQPI 0.31642116084748 0.007625786515184 -0.14 -0.454666666666667 9.35619433120779 30.2350671896903 -0.14 -0.454666666666667 0.115979322344108 0.000947312528520714 -1.8700413573097 -6.49356427459183 O15446 CD3EAP O15446.2.S128.p_CD3EAP O15446-2_S128sS130s_2_2_128_130 O15446-2 O15446-2 Isoform 2 of DNA-directed RNA polymerase I subunit RPA34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29881.30088.4 17.96 17.96 1.146 4 2 2 0 929.2408 3554.0056 S128s S130s TMT10 119 (R) ILEGPQQSLsGsPLQPIPASPPPQIPPGLRPR (F) ILEGPQQS(0.0)LS(0.99)GS(0.99)PLQPIPAS(0.0)PPPQIPPGLRPR s:Phosphorylated S CD3EAP 55456.1 8 9 1198.1 167.21 HUMAN 1 -9.3562 -30.2351 EGPQRLRSDPGPPTE-p P98174;S135-p EGPQRLRSDPGPPTE 0.672936769983171 0.0807077100651768 0.065 0.227 3.22315644217719 14.4974568494237 0.065 0.227 0.476084843677341 0.0355021222434941 0.765384620683205 2.78297750361769 P98174 FGD1 P98174.S135.p_FGD1 P98174_S135s _1_1_135_135 P98174 P98174 FYVE, RhoGEF and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11974.11974.4 19.41 14.78 11.229 5 1 1 0 675.3641 2618.4666 S135s TMT10 133 (R) LRsDPGPPTETPSQRPSPLK (R) LRS(0.99)DPGPPT(0.0)ET(0.0)PS(0.0)QRPS(0.0)PLK K:TMT10,s:Phosphorylated S FGD1 107757.1 1 3 1189.1 168.38 HUMAN 1 3.2232 14.4975 EGPRDADSDENDKGE-p Q14671-4;S187-p EGPRDADSDENDKGE 0.322409753465923 0.408616250523392 0.173666666666667 -0.166666666666667 9.20390927975808 5.17295510532615 0.173666666666667 -0.166666666666667 0.120118270931045 0.303881659530277 1.84366643625883 -1.13542435265492 Q14671 PUM1 Q14671.4.S187.p_PUM1 Q14671-4_S187s _1_1_187_187 Q14671-4 Q14671-4 Isoform 4 of Pumilio homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7002.7002.5 8.03 8.03 99 1 1 1 0 629.9197 3065.5979 S187s TMT10 177 (R) AMGEGPRDADsDENDKGEKK (N) AMGEGPRDADS(1.0)DENDKGEKK K:TMT10,s:Phosphorylated S PUM1 120240.2 1 1 720.2 237.18 HUMAN 1 9.2039 -5.173 EGQATAVTPNKNSSC-p Q9BXB4;T27-p EGQATAVTPNKNSSC 0.168658916684596 0.00129606731851265 -0.284 -1.06733333333333 15.4322690352979 47.1465335209406 -0.284 -1.06733333333333 0.028626819289134 1.92906405134876e-05 -2.95992362175107 -13.865093764951 Q9BXB4 OSBPL11 Q9BXB4.T27.p_OSBPL11 Q9BXB4_T27t _1_1_27_27 Q9BXB4 Q9BXB4 Oxysterol-binding protein-related protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11820.11820.4 20.15 12.77 3.053 12 1 1 0 1031.5095 4043.0554 T27t TMT10 12 (K) VSESEGKLEGQATAVtPNKNSSCGGGISSSSSSR (G) VS(0.0)ES(0.0)EGKLEGQAT(0.0)AVT(0.99)PNKNS(0.0)S(0.0)CGGGIS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)R K:TMT10,C:Carbamidomethylation,t:Phosphorylated T OSBPL11 84383.5 6 2 1360.1 150.18 HUMAN 1 -15.4323 -47.1465 EGQGDVPTPKQFVAD-p Q9Y2Z0;T265-p EGQGDVPTPKQFVAD 0.466272747529073 0.0175936501308428 -0.103 0.362666666666667 6.11744870983546 24.1791835901768 -0.103 0.362666666666667 0.244486638299511 0.00382016077500861 -1.30545919645063 4.83307253649951 Q9Y2Z0 SUGT1 Q9Y2Z0.T265.p_SUGT1 Q9Y2Z0_T265t _1_1_265_265 Q9Y2Z0 Q9Y2Z0|Q9Y2Z0-2 Protein SGT1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13574.13574.3 10.47 9.96 99 1 1 1 0 560.2986 1598.9154 T265t TMT10 257 (K) LEGQGDVPtPK (Q) LEGQGDVPT(1.0)PK K:TMT10,t:Phosphorylated T SUGT1 41308.6 1 1 3463.1 50.35 HUMAN 1 -6.1174 24.1792 EGQGLDWSLKIPKMK-p Q09666;S1123-p EGQGLDWSLKIPKMK 0.132719824830516 0.537699698395001 -0.831 -0.121 18.1038598455866 3.62461338745251 -0.831 -0.121 0.0154744070062877 0.434048901317901 -3.483315067714 -0.844524226144016 Q09666 AHNAK Q09666.S1123.p_AHNAK Q09666_S1123s _1_1_1123_1123 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27540.27540.5 24.03 22.26 99 1 1 1 0 661.7794 3224.9065 S1123s TMT10 1108 (K) VDIKAPDVEGQGLDWsLKIPK (M) VDIKAPDVEGQGLDWS(1.0)LKIPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 15 48 1.1 4313.36 HUMAN 1 -18.1039 -3.6246 EGQHLQNSFKHPAGK-p Q9P219;S1023-p EGQHLQNSFKHPAGK 0.498153657512036 0.00604775327324358 -0.198666666666667 -0.495666666666667 5.57555124591354 32.0375390015919 -0.198666666666667 -0.495666666666667 0.276977745159613 0.000625527057168918 -1.20856374471315 -7.06460327214373 Q9P219 CCDC88C Q9P219.S1023.p_CCDC88C Q9P219_S1023s _1_1_1023_1023 Q9P219 Q9P219 Protein Daple HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7678.7678.4 12.29 12.29 99 1 1 1 0 718.876 2792.5159 S1023s TMT10 1012 (R) QNQGEGQHLQNsFKHPAGK (T) QNQGEGQHLQNS(1.0)FKHPAGK K:TMT10,s:Phosphorylated S CCDC88C 229367.3 2 6 742.1 234.08 HUMAN 1 -5.5756 -32.0375 EGQIANPSPISRSLL-p Q8WU58;S296-p EGQIANPSPISRSLL 0.756134765212212 0.050124945718593 0.0443333333333333 -0.315 2.32234357080354 17.3768216732811 0.0443333333333333 -0.315 0.585821953790203 0.0182943857677551 0.579060469734862 -3.3346138762058 Q8WU58 FAM222B Q8WU58.S296.p_FAM222B Q8WU58_S296s _1_1_296_296 Q8WU58 Q8WU58|B4DRX9 Protein FAM222B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16462.16462.3 18.93 18.93 1.129 6 1 1 0 818.7359 2374.2234 S296s TMT10 280 (R) AGISTTSVCEGQIANPsPISR (S) AGIS(0.0)T(0.0)T(0.0)S(0.0)VCEGQIANPS(0.99)PIS(0.0)R C:Carbamidomethylation,s:Phosphorylated S FAM222B 60107.1 1 1 5479.1 18.93 HUMAN 1 2.3223 -17.3768 EGQQSERTPNNRPDA-p Q9BVJ6;T541-p EGQQSERTPNNRPDA 0.708154037575606 0.00259997565261951 -0.058 -0.929333333333333 2.81684083785751 39.3957074308192 -0.058 -0.929333333333334 0.522776330751866 0.000114928901822398 -0.682958584609629 -9.86285060932849 Q9BVJ6 UTP14A Q9BVJ6.T541.p_UTP14A Q9BVJ6_T541t _1_1_541_541 Q9BVJ6 Q9BVJ6|Q5TAP6|Q9BVJ6-3|Q9BVJ6-2 U3 small nucleolar RNA-associated protein 14 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11212.11212.5 13.05 6.4 1.56 2 1 1 0 654.1458 3186.7384 T541t TMT10 527 (K) ELPRPVLEGQQSERtPNNRPDAPK (E) ELPRPVLEGQQS(0.0)ERT(0.99)PNNRPDAPK K:TMT10,t:Phosphorylated T UTP14A 88147.4 1 11 550.1 274.41 HUMAN 1 -2.8168 -39.3957 EGREKTMSSDDEDCS-p Q9NVR2;S381-p EGREKTMSSDDEDCS 0.926898620156409 0.0379633341517275 -0.0246666666666667 0.269666666666667 0.651024064390846 19.0794250804239 -0.0246666666666667 0.269666666666667 0.860790754188196 0.0123611105914984 -0.183894892328123 3.68086718534908 Q9NVR2 INTS10 Q9NVR2.S381.p_INTS10 Q9NVR2_S381sS382s_2_2_381_382 Q9NVR2 Q9NVR2 Integrator complex subunit 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7328.7328.2 7.93 7.93 7.928 4 2 2 0 990.3721 1803.8141 M380m S381s S382s TMT10 379 (K) TmssDDEDCSAK (G) T(0.0)M(1.0)S(0.99)S(0.99)DDEDCS(0.0)AK C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,s:Phosphorylated S INTS10 83261.5 1 3 3258.1 55.7 HUMAN 1 -0.651 19.0794 EGRGRAGTLPRDYRY-p Q13796;T1014-p EGRGRAGTLPRDYRY 0.91663119506366 0.525337493660749 -0.0186666666666667 -0.114333333333333 0.737316323285479 3.75570059412597 -0.0186666666666667 -0.114333333333333 0.843856048584738 0.421143343373577 -0.206623725825299 -0.869992830779816 Q13796 SHROOM2 Q13796.T1014.p_SHROOM2 Q13796_T1014t _1_1_1014_1014 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5202.5202.2 9.7 2.48 7.022 2 1 1 0 564.7642 1048.5534 T1014t Hydrogen 1012 (R) AGtLPRDYR (Y) AGT(0.99)LPRDY(0.0)R t:Phosphorylated T SHROOM2 177605.1 5 19 90.1 622.62 HUMAN 1 -0.7373 -3.7557 EGRKRCPSQSSSRPA-p Q6PKG0;S1056-p EGRKRCPSQSSSRPA 0.0626849711829956 0.00404124447761282 -0.406 -0.612333333333333 26.1357210130592 35.2607731636845 -0.406 -0.612333333333333 0.00243460157532459 0.000297798621874107 -5.33729131042489 -8.19071040544741 Q6PKG0 LARP1 Q6PKG0.S1056.p_LARP1 Q6PKG0_S1056s _1_1_1056_1056 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11423.11423.4 12.11 6.65 9.869 7 1 1 0 968.7421 3791.9685 S1056s TMT10 1053 (K) RCPsQSSSRPAAMISQPPTPPTGQPVREDAK (W) RCPS(0.99)QS(0.0)S(0.0)S(0.0)RPAAMIS(0.0)QPPT(0.0)PPT(0.0)GQPVREDAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LARP1 123907.4 9 63 28.1 931.95 HUMAN 1 -26.1357 -35.2608 EGRLGEESPSLHKRK-p Q9NX74;S445-p EGRLGEESPSLHKRK 0.353738095287682 0.0469578797132425 0.148333333333333 -0.239333333333333 8.38495524366238 17.7690874638099 0.148333333333333 -0.239333333333333 0.145045572193942 0.0167144177946383 1.70188315470591 -3.41293391801157 Q9NX74 DUS2 Q9NX74.S445.p_DUS2 Q9NX74_S445s _1_1_445_445 Q9NX74 Q9NX74|E7EUN9 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11483.11483.3 13.07 13.07 3.417 2 1 1 0 545.6225 1554.8892 S445s TMT10 441 (R) LGEEsPSLHK (R) LGEES(0.99)PS(0.0)LHK K:TMT10,s:Phosphorylated S DUS2 55848.1 4 1 4148.1 36.68 HUMAN 1 8.385 -17.7691 EGRPMFVSPCVDKSK-p Q15020;S778-p EGRPMFVSPCVDKSK 0.661749549724691 0.0565819592607696 0.0586666666666667 -0.287333333333333 3.35804516557901 16.6233874549608 0.0586666666666667 -0.287333333333333 0.461525268302656 0.0217601184206073 0.792242621355087 -3.18646026702799 Q15020 SART3 Q15020.S778.p_SART3 Q15020_S778s _1_1_778_778 Q15020 Q15020|Q15020-4 Squamous cell carcinoma antigen recognized by T-cells 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17459.17459.3 15.52 11.83 8.793 2 1 1 0 749.3755 2166.1452 S778s TMT10 769 (K) SVEGRPMFVsPCVDK (S) S(0.0)VEGRPMFVS(0.99)PCVDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SART3 110788.4 1 3 2466.1 82.09 HUMAN 1 3.358 -16.6234 EGRSAADSISESVPV-p P45974;S783-p EGRSAADSISESVPV 0.880906925284752 0.261236325907508 -0.026 -0.122333333333333 1.08398781797992 7.68133003042761 -0.026 -0.122333333333333 0.779114376536593 0.170555997986459 -0.294815201488415 -1.57934638158361 P45974 USP5 P45974.S783.p_USP5 P45974_S783s _1_1_783_783 P45974 P45974|P45974-2 Ubiquitin carboxyl-terminal hydrolase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17009.17009.2 18.05 13.5 1.131 4 1 1 0 991.5162 1902.0584 S783s TMT10 779 (R) SAADsISESVPVGPK (V) S(0.0)AADS(0.99)IS(0.0)ES(0.0)VPVGPK K:TMT10,s:Phosphorylated S USP5 96697.4 3 3 3819.1 42.5 HUMAN 1 -1.084 -7.6813 EGRVVEISRLQEIFT-p Q9P2W9;S264-p EGRVVEISRLQEIFT 0.833010096367421 0.00165031614303791 -0.0323333333333333 -0.937333333333333 1.53050285039037 44.309770372305 -0.0323333333333334 -0.937333333333333 0.702990918959207 3.70700321573408e-05 -0.402121610908947 -12.2506883573264 Q9P2W9 STX18 Q9P2W9.S264.p_STX18 Q9P2W9_S264s _1_1_264_264 Q9P2W9 Q9P2W9|D6RF48 Syntaxin-18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32135.32135.3 12.01 12.01 4.246 2 1 1 0 743.7496 2149.2633 S264s TMT10 260 (R) VVEIsRLQEIFTEK (V) VVEIS(0.99)RLQEIFT(0.0)EK K:TMT10,s:Phosphorylated S STX18 38844 1 5 2491.1 81.28 HUMAN 1 -1.5305 -44.3098 EGSAGPGSPGSAPPS-p Q8NFZ0-2;S164-p EGSAGPGSPGSAPPS 0.52772536298283 0.242664451168041 0.0996666666666667 0.116 5.13589869541812 8.10272380461132 0.0996666666666667 0.116 0.306485639611824 0.154784553791359 1.12890492324346 1.6524450170037 Q8NFZ0 FBXO18 Q8NFZ0.2.S164.p_FBXO18 Q8NFZ0-2_S164s_1_1_164_164 Q8NFZ0-2 Q8NFZ0-2|F6UZG9 Isoform 2 of F-box DNA helicase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21681.21681.4 12.9 12.9 2.23 10 1 1 0 1180.2561 4637.03 N130n S164s TMT10 129 (K) SnSVGQDSCQDSEGDMIFPAESSCALPQEGSAGPGsPGSAPPSR (K) S(0.0)N(1.0)S(0.0)VGQDS(0.0)CQDS(0.0)EGDMIFPAES(0.0)S(0.0)CALPQEGS(0.0)AGPGS(0.99)PGS(0.0)APPS(0.0)R C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S FBXO18 125426.4 1 1 2846.1 68.16 HUMAN 1 5.1359 8.1027 EGSCKKLSPPPLPPR-p O00750;S155-p EGSCKKLSPPPLPPR 0.115313884527732 0.018686426376418 -0.287666666666667 -0.362 19.5233624826318 23.7810439208668 -0.287666666666667 -0.362 0.0111599886197772 0.00418692911110051 -3.77739727156096 -4.73599188874921 O00750 PIK3C2B O00750.S155.p_PIK3C2B O00750_S155s _1_1_155_155 O00750 O00750|F5GWN5 Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16259.16881.3 10.38 10.38 99 1 1 1 0 547.3291 1560.0038 S155s TMT10 153 (K) KLsPPPLPPR (A) KLS(1.0)PPPLPPR K:TMT10,s:Phosphorylated S PIK3C2B 186932.5 7 3 1730.1 119.12 HUMAN 1 -19.5234 -23.781 EGSDSGDSEDDVGHK-p Q7KZ85;S78-p EGSDSGDSEDDVGHK 0.330875085214081 0.0138170402589298 -0.620666666666667 0.400333333333333 8.97665077414502 25.8211842102503 -0.620666666666667 0.400333333333333 0.126571207283805 0.00261746919383446 -1.80432088551201 5.24797721716076 Q7KZ85 SUPT6H Q7KZ85.S78.p_SUPT6H Q7KZ85_S73sS75sS78s_3_3_73_78 Q7KZ85 Q7KZ85|Q7KZ85-3 Transcription elongation factor SPT6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17014.17014.3 13.36 13.36 99 3 3 3 0 1428.5565 4043.7477 S73s S75s S78s TMT10 56 (K) GFINDDDDEDEGEEDEGsDsGDsEDDVGHKK (R) GFINDDDDEDEGEEDEGS(1.0)DS(1.0)GDS(1.0)EDDVGHKK K:TMT10,s:Phosphorylated S SUPT6H 200324.3 2 19 279.1 388.92 HUMAN 1 -8.9767 25.8212 EGSDSKESPKTKSDE-p Q6PKG0;S220-p EGSDSKESPKTKSDE 0.742175050092019 0.0501266626475371 -0.116 -0.241666666666667 2.45909646151944 17.3707347369888 -0.116 -0.241666666666667 0.567662693885072 0.0183200445865692 -0.608231990454567 -3.33340509356913 Q6PKG0 LARP1 Q6PKG0.S220.p_LARP1 Q6PKG0_S220s _1_1_220_220 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5481.5481.4 9.84 3.85 2.098 3 1 1 0 658.5977 2551.4021 S220s TMT10 208 (K) EQEKGEGSDSKEsPK (T) EQEKGEGS(0.0)DS(0.0)KES(0.99)PK K:TMT10,s:Phosphorylated S LARP1 123907.4 6 37 28.1 931.95 HUMAN 1 -2.4591 -17.3707 EGSDTTGSPTEFLEE-p P27816;S99-p EGSDTTGSPTEFLEE 0.420640246751359 0.0270837062306863 0.107666666666667 0.294 6.93921257716146 21.2683013693058 0.107666666666667 0.294 0.202338600717614 0.00746740769664879 1.45036844535154 4.15238007001257 P27816 MAP4 P27816.S99.p_MAP4 P27816_S99s_1_1_99_99 P27816 P27816|P27816-6|P27816-2|P27816-5 Microtubule-associated protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20352.20352.5 27.86 27.86 1.463 12 1 1 0 1175.4019 5792.0197 N86n S99s TMT10 64 (K) KKPCSETSQIEDTPSSKPTLLAnGGHGVEGSDTTGsPTEFLEEK (M) KKPCS(0.0)ET(0.0)S(0.0)QIEDT(0.0)PS(0.0)S(0.0)KPT(0.0)LLAN(1.0)GGHGVEGS(0.0)DT(0.0)T(0.0)GS(0.99)PT(0.0)EFLEEK K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S MAP4 121516.3 4 50 38.2 865.62 HUMAN 1 6.9392 21.2683 EGSEFSFSDGEVAEK-p Q9BVS4;S337-p EGSEFSFSDGEVAEK 0.113753456802484 0.0458956443964965 -0.763333333333333 0.356333333333333 19.6910594983605 17.9056048165952 -0.763333333333333 0.356333333333333 0.0107372743543819 0.0161971840946001 -3.81295986988643 3.4403887279917 Q9BVS4 RIOK2 Q9BVS4.S337.p_RIOK2 Q9BVS4_S337s _1_1_337_337 Q9BVS4 Q9BVS4|Q9BVS4-2 Serine/threonine-protein kinase RIO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19513.19513.3 18.46 18.46 2.563 4 1 1 0 990.8261 2890.4925 S337s TMT10 325 (K) NIETKEGSEFSFsDGEVAEK (A) NIET(0.0)KEGS(0.0)EFS(0.0)FS(0.99)DGEVAEK K:TMT10,s:Phosphorylated S RIOK2 63738.3 5 1 1652.1 123.35 HUMAN 1 -19.6911 17.9056 EGSEQPASPASPLSS-p Q66K14;S432-p EGSEQPASPASPLSS 0.324520848949951 0.0849594956564103 0.191333333333333 -0.238333333333333 9.15468775956982 14.1720717477523 0.191333333333333 -0.238333333333333 0.121487396192923 0.038264216509134 1.83514347442032 -2.7229083778778 Q66K14 TBC1D9B Q66K14.S432.p_TBC1D9B Q66K14_S432s _1_1_432_432 Q66K14 Q66K14|Q66K14-2 TBC1 domain family member 9B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14204.14204.4 25.3 25.3 1.241 10 1 1 0 930.462 3638.855 S432s TMT10 409 (R) KASVVDPSTESSPAPQEGSEQPAsPASPLSSR (Q) KAS(0.0)VVDPS(0.0)T(0.0)ES(0.0)S(0.0)PAPQEGS(0.0)EQPAS(0.99)PAS(0.0)PLS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S TBC1D9B 141663.3 4 6 988.1 191.79 HUMAN 1 9.1547 -14.1721 EGSHRAHSLLFENSD-p Q8IZ21;S443-p EGSHRAHSLLFENSD 0.606224103595786 0.714460681798457 -0.073 0.0383333333333334 4.01938123453427 2.00951454671302 -0.073 0.0383333333333334 0.396334498392392 0.629576552833959 -0.920832536802812 0.510848659648386 Q8IZ21 PHACTR4 Q8IZ21.S443.p_PHACTR4 Q8IZ21_S443s _1_1_443_443 Q8IZ21 Q8IZ21-2|Q8IZ21-3 Phosphatase and actin regulator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20261.20465.3 20.26 20.26 8.708 7 1 1 0 870.0634 2528.2102 S443s TMT10 441 (R) AHsLLFENSDSFSEDSSTLGR (T) AHS(0.99)LLFENS(0.0)DS(0.0)FS(0.0)EDS(0.0)S(0.0)T(0.0)LGR s:Phosphorylated S PHACTR4 78438 3 11 350.1 351.04 HUMAN 1 -4.0194 2.0095 EGSITRGTPTSKISV-p O75376-2;T1164-p EGSITRGTPTSKISV 0.887952033259856 0.311662699981114 0.028 -0.172333333333333 1.00426792152581 6.69145994505979 0.028 -0.172333333333333 0.79354801174775 0.214217035785429 0.274948648239404 -1.40651772678434 O75376 NCOR1 O75376.2.T1164.p_NCOR1 O75376-2_T1164t _1_1_1164_1164 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10110.10110.3 12.25 7.05 1.487 6 1 1 0 790.7531 2290.2767 T1164t TMT10 1150 (R) GTAGAIQEGSITRGtPTSK (I) GT(0.0)AGAIQEGS(0.0)IT(0.0)RGT(0.99)PT(0.0)S(0.0)K K:TMT10,t:Phosphorylated T NCOR1 259453.1 2 7 35.1 889.74 HUMAN 1 1.0043 -6.6915 EGSKAGLSPANCQSD-p Q14692;S552-p EGSKAGLSPANCQSD 0.679055529340642 0.00752314179680432 -0.07 -0.527666666666667 3.14620501053357 30.3490817208095 -0.07 -0.527666666666667 0.484595636159787 0.00092276651775555 -0.749954914616867 -6.528532558794 Q14692 BMS1 Q14692.S552.p_BMS1 Q14692_S552s _1_1_552_552 Q14692 Q14692 Ribosome biogenesis protein BMS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13393.13393.4 17.7 17.7 5.544 2 1 1 0 600.0553 2317.2335 S552s TMT10 549 (K) AGLsPANCQSDRVNLEK (S) AGLS(0.99)PANCQS(0.0)DRVNLEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BMS1 146660.4 4 3 1331.1 153.07 HUMAN 1 -3.1462 -30.3491 EGSNGAATPSAPCGS-p A0A087X165;T643-p EGSNGAATPSAPCGS 0.362969263101371 0.130623570791711 0.145333333333333 0.176333333333333 8.17607899437877 11.6503350462677 0.145333333333333 0.176333333333333 0.152192096823675 0.0683858887410931 1.6656925367933 2.26936917511162 A0A087X165 NotFound A0A087X165.T643.p_NotFound A0A087X165_T643t _1_1_643_643 A0A087X165 A0A087X165|Q9C0H9-5|Q9C0H9-2 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8132.8132.3 18.3 18.3 2.698 4 1 1 0 685.6441 1974.9501 T643t TMT10 635 (K) IEGSNGAAtPSAPCGSGGR (S) IEGS(0.0)NGAAT(0.99)PS(0.0)APCGS(0.0)GGR C:Carbamidomethylation,t:Phosphorylated T SRCIN1 130745.5 2 22 98.1 603.22 HUMAN 1 8.1761 11.6503 EGSNSGGTWPKAMLS-p Q8TDM6;T946-p EGSNSGGTWPKAMLS 0.329531482604701 0.0173847218001726 -0.334 0.387333333333333 9.01139788828362 24.2556798474662 -0.334 0.387333333333333 0.125562574326367 0.00375346192930607 -1.81033595216829 4.85187793587462 Q8TDM6 DLG5 Q8TDM6.T946.p_DLG5 Q8TDM6_T946t _1_1_946_946 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12094.12094.2 16.67 12.05 3.177 4 1 1 0 965.9516 1850.9285 T946t TMT10 936 (K) ADSEGSNSGGtWPK (A) ADS(0.0)EGS(0.0)NS(0.0)GGT(0.99)WPK K:TMT10,t:Phosphorylated T DLG5 215575.4 3 20 34.1 890.58 HUMAN 1 -9.0114 24.2557 EGSPPEHSPEQGRSL-p Q5TH69;S1066-p EGSPPEHSPEQGRSL 0.236277322601605 0.143072834818274 0.280666666666667 -0.172666666666667 12.0044209747492 11.1264053953832 0.280666666666667 -0.172666666666667 0.0630315377496209 0.0771541800980148 2.33311875846505 -2.17727477795078 Q5TH69 ARFGEF3 Q5TH69.S1066.p_ARFGEF3 Q5TH69_S1061sS1066s_2_2_1061_1066 Q5TH69 Q5TH69 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14970.14970.4 10.42 10.42 10.421 4 2 2 0 756.8212 2864.3318 S1061s S1066s TMT10 1046 (K) ATGSAGLLGDPECEGsPPEHsPEQGR (S) AT(0.0)GS(0.0)AGLLGDPECEGS(0.99)PPEHS(0.99)PEQGR C:Carbamidomethylation,s:Phosphorylated S ARFGEF3 244013.5 1 15 618.1 260.46 HUMAN 1 12.0044 -11.1264 EGSQGELTPANSQSR-p A8K070;T514-p EGSQGELTPANSQSR 0.650258493269532 0.0912736061802204 0.107333333333333 -0.423666666666667 3.5056224399808 13.752240396965 0.107333333333333 -0.423666666666667 0.446105683194689 0.0421479018758885 0.821365004672403 -2.645987718941 A8K070 NotFound A8K070.T514.p_NotFound A8K070_T514t _1_1_514_514 A8K070 Q13098-7|A8K070|A0A096LPJ3|Q13098-5|A0A096LP07|C9JFE4 COP9 signalosome complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5956.5956.2 13.83 10.15 1.87 4 1 1 0 935.4329 1789.8878 T514t TMT10 507 (R) EGSQGELtPANSQSR (M) EGS(0.0)QGELT(0.99)PANS(0.0)QS(0.0)R t:Phosphorylated T GPS1 59605.7 3 6 2547.1 79 HUMAN 1 3.5056 -13.7522 EGSRRTKSSSEEVLE-p A0A087WXD1;S694-p EGSRRTKSSSEEVLE 0.45173892138472 0.20543308537984 -0.107666666666667 -0.182666666666667 6.37093238300494 9.0444273169609 -0.107666666666667 -0.182666666666667 0.2306252008351 0.124611254524609 -1.3503836035423 -1.81539729434892 A0A087WXD1 SLC9A7 A0A087WXD1.S694.p_SLC9A7 A0A087WXD1_S694s _1_1_694_694 A0A087WXD1 A0A087WXD1|Q96T83 Sodium/hydrogen exchanger HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20984.20984.3 14.25 7.97 2.128 3 1 1 0 806.7241 2338.1961 S694s TMT10 694 (K) sSSEEVLERDLGMGDQK (V) S(0.99)S(0.0)S(0.0)EEVLERDLGMGDQK K:TMT10,s:Phosphorylated S SLC9A7 80671.1 10 1 3348.1 53.19 HUMAN 1 -6.3709 -9.0444 EGSSRNVSAEQKDEN-p J3KNR0;S666-p EGSSRNVSAEQKDEN 0.515757067329565 0.246826065953482 -0.109333333333333 -0.112666666666667 5.31066148660383 8.00654782637876 -0.109333333333333 -0.112666666666667 0.294397319449643 0.158250546093443 -1.16069595219366 -1.63577754507487 J3KNR0 NotFound J3KNR0.S666.p_NotFound J3KNR0_S666s _1_1_666_666 J3KNR0 J3KNR0|P27448-7|P27448-6|A0A0A0MQR8|P27448-8|A0A0A0MST9 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5066.5066.3 8.1 8.1 99 1 1 1 0 600.6376 1719.9277 S666s Hydrogen 664 (R) NVsAEQKDENK (E) NVS(1.0)AEQKDENK K:TMT10-Lys-Only,s:Phosphorylated S MARK3 87513.5 1 44 200.3 451.67 HUMAN 1 -5.3107 -8.0065 EGSYSSLSPPTLTPV-p Q15652;S1228-p EGSYSSLSPPTLTPV 0.591065958633332 0.332241803519931 -0.08 -0.101 4.20548125591721 6.34075555845475 -0.08 -0.101 0.379709859748664 0.232233273624402 -0.956209341505575 -1.34471003092725 Q15652 JMJD1C Q15652.S1228.p_JMJD1C Q15652_S1228s _1_1_1228_1228 Q15652 Q15652|Q15652-3|A0A1W2PNZ9|Q15652-2 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26950.26950.3 17.09 17.09 1.709 7 1 1 0 943.1494 2747.469 S1228s TMT10 1221 (K) EGSYSSLsPPTLTPVMPVNAGGK (V) EGS(0.0)Y(0.0)S(0.0)S(0.0)LS(0.99)PPT(0.0)LT(0.0)PVMPVNAGGK K:TMT10,s:Phosphorylated S JMJD1C 286573.8 8 14 377.1 336.35 HUMAN 1 -4.2055 -6.3408 EGTDRPGSPA_____-p A6NKF1;S402-p EGTDRPGSPA_____ 0.944240210740746 0.140259521562885 0.011 0.159666666666667 0.491653123309419 11.2398864857129 0.011 0.159666666666667 0.892965515541984 0.0751642539916465 0.141006415642146 2.19717429060119 A6NKF1 NotFound A6NKF1.S402.p_NotFound A6NKF1_S402s _1_1_402_402 A6NKF1 A6NKF1|F8WC89 SAC3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24877.25087.3 19.94 19.38 3.214 3 1 1 0 890.7302 2590.2028 S402s TMT10 383 (R) TLEEVVMAEEEDEGTDRPGsPA (-) T(0.0)LEEVVMAEEEDEGT(0.0)DRPGS(0.99)PA s:Phosphorylated S SAC3D1 44179.9 5 3 4138.1 36.83 HUMAN 1 0.4917 11.2399 EGTSDPPSPLLLPSP-p Q8NC74;S145-p EGTSDPPSPLLLPSP 0.253185624491412 0.241069076171382 -0.191 0.138333333333333 11.3726642284129 8.13902763020639 -0.191 0.138333333333333 0.0729010153561204 0.153496061651428 -2.22153054021226 1.65873450912332 Q8NC74 RBBP8NL Q8NC74.S145.p_RBBP8NL Q8NC74_S145s _1_1_145_145 Q8NC74 Q8NC74 RBBP8 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27756.27756.2 19.78 13.78 3.565 4 1 1 0 1237.1465 2393.3117 S145s TMT10 138 (K) EGTSDPPsPLLLPSPGGWK (A) EGT(0.0)S(0.0)DPPS(0.99)PLLLPS(0.0)PGGWK K:TMT10,s:Phosphorylated S RBBP8NL 71886.7 7 2 565.1 270.89 HUMAN 1 -11.3727 8.139 EGTSQLASPLKLKYN-p Q4KWH8;S1386-p EGTSQLASPLKLKYN 0.296282329630081 0.00437637139346334 -0.149666666666667 -0.723333333333333 9.94952651898207 34.6648252409635 -0.149666666666667 -0.723333333333333 0.101168974573254 0.000341599696297661 -1.97294279675889 -7.97163559701834 Q4KWH8 PLCH1 Q4KWH8.S1386.p_PLCH1 Q4KWH8_S1386s _1_1_1386_1386 Q4KWH8 Q4KWH8|Q4KWH8-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14427.14427.3 13.19 13.19 5.726 3 1 1 0 556.9709 1588.931 S1386s TMT10 1379 (R) EGTSQLAsPLK (L) EGT(0.0)S(0.0)QLAS(0.99)PLK K:TMT10,s:Phosphorylated S PLCH1 191330.6 3 14 201.1 451.38 HUMAN 1 -9.9495 -34.6648 EGTYGVVYKGRHKTT-p P06493;Y19-p EGTYGVVYKGRHKTT 0.97269902873609 0.0512869371900704 -0.007 -0.493 0.234285714669029 17.2187602705311 -0.00699999999999999 -0.493 0.947483004480822 0.0189724742886735 -0.0689798491245563 -3.30328878686028 P06493 CDK1 P06493.Y19.p_CDK1 P06493_Y19y _1_1_19_19 P06493 G3V5T9|Q00526|P24941|A0A024QZP7|P06493|P24941-2|P06493-2|E7ESI2|A0A087WZZ9|G3V317 Cyclin-dependent kinase 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.21328.21973.3 15.06 15.06 3.317 3 1 1 0 575.3082 1643.9409 Y19y TMT10 10 (K) IGEGTYGVVyK (G) IGEGT(0.0)Y(0.0)GVVY(0.99)K K:TMT10,y:Phosphorylated Y CDK1 34151.9 1 5 21.1 73.58 HUMAN 1 -0.2343 -17.2188 EGVDGGQSPRAGHDG-p O00418;S18-p EGVDGGQSPRAGHDG 0.79382020749629 0.884805253649508 0.095 -0.0426666666666667 1.93512354564576 0.747547884195322 0.095 -0.0426666666666667 0.640453562048334 0.841870344757946 0.49438626410825 -0.209276824277468 O00418 EEF2K O00418.S18.p_EEF2K O00418_S18s _1_1_18_18 O00418 O00418|H3BRH4 Eukaryotic elongation factor 2 kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29571.29571.3 23.06 23.06 99 1 1 1 0 732.6703 2116.0305 S18s Acetyl 2 (M) ADEDLIFRLEGVDGGQsPR (A) ADEDLIFRLEGVDGGQS(1.0)PR s:Phosphorylated S EEF2K 82713.2 5 1 995.1 190.99 HUMAN 1 1.9351 -0.7475 EGVIEFRSYSDMKRA-p Q13247;S155-p EGVIEFRSYSDMKRA 0.11625260019599 0.00698909749920336 0.332666666666667 -0.539666666666667 19.4598582618897 30.9002232202426 0.332666666666667 -0.539666666666667 0.0113243732131663 0.000812788739082004 3.76397704768769 -6.6997223369501 Q13247 SRSF6 Q13247.S155.p_SRSF6 Q13247_S155s _1_1_155_155 Q13247 Q13247|Q13247-3 Serine/arginine-rich splicing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18510.18510.3 14.69 14.69 2.19 4 1 1 0 772.045 2234.1527 S155s TMT10 146 (R) TNEGVIEFRsYSDMK (R) T(0.0)NEGVIEFRS(0.99)Y(0.0)S(0.0)DMK K:TMT10,s:Phosphorylated S SRSF6 39700.2 3 20 743.1 233.79 HUMAN 1 19.4599 -30.9002 EGVLQSPSQDQEKLG-p Q9C0C2;S437-p EGVLQSPSQDQEKLG 0.55149404590049 0.162822520207162 0.091 -0.142333333333333 4.76990012975955 10.364545508327 0.091 -0.142333333333333 0.333434080316078 0.0919486694580567 1.06171730071909 -2.04426091698505 Q9C0C2 TNKS1BP1 Q9C0C2.S437.p_TNKS1BP1 Q9C0C2_S437s _1_1_437_437 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18115.18115.3 16.06 14.84 1.163 3 1 1 0 739.7013 2137.1177 S437s TMT10 428 (R) FSEGVLQSPsQDQEK (L) FS(0.0)EGVLQS(0.0)PS(0.99)QDQEK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 2 16 4.1 2105.7 HUMAN 1 4.7699 -10.3645 EGVRCICSQLSLTTK-p Q12765-2;S209-p EGVRCICSQLSLTTK 0.563581277348269 0.546027767166226 0.115666666666667 -0.0813333333333333 4.58809362495273 3.53441816857025 0.115666666666667 -0.0813333333333333 0.347688749083115 0.443157581059375 1.02800252070104 -0.826888421575366 Q12765 SCRN1 Q12765.2.S209.p_SCRN1 Q12765-2_S209s _1_1_209_209 Q12765-2 Q12765-2|Q12765-3 Isoform 2 of Secernin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20784.20784.3 9.65 9.65 1.959 4 1 1 0 616.9878 1768.9701 S209s TMT10 206 (R) CICsQLSLTTK (M) CICS(0.99)QLS(0.0)LT(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SCRN1 49397.4 1 1 6769.1 9.65 HUMAN 1 4.5881 -3.5344 EGVVEFASYGDLKNA-p Q13243;S153-p EGVVEFASYGDLKNA 0.198300279868763 0.469655123459997 -0.199333333333333 -0.074 13.6813190438963 4.37510019204147 -0.199333333333333 -0.074 0.0428418380941502 0.365165702759296 -2.63459219717557 -0.988005889069396 Q13243 SRSF5 Q13243.S153.p_SRSF5 Q13243_S153s _1_1_153_153 Q13243 Q13243|Q13243-3 Serine/arginine-rich splicing factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27162.27162.3 13.13 13.13 4.175 2 1 1 0 727.0389 2099.1425 S153s TMT10 144 (K) LNEGVVEFAsYGDLK (N) LNEGVVEFAS(0.99)Y(0.0)GDLK K:TMT10,s:Phosphorylated S SRSF5 31377.4 1 10 743.3 233.79 HUMAN 1 -13.6813 -4.3751 EHDENGATGPVKRAR-p P05455;T379-p EHDENGATGPVKRAR 0.744474740122106 0.6222244716781 0.0766666666666666 0.0473333333333334 2.43179031792533 2.80063433009077 0.0766666666666666 0.0473333333333334 0.571243101192228 0.524730812521746 0.602435487759077 0.679527787771298 P05455 SSB P05455.T379.p_SSB P05455_T379t _1_1_379_379 P05455 P05455 Lupus La protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8804.8804.5 8.48 8.48 1.657 3 1 1 0 705.556 3443.7849 T379t TMT10 361 (K) KTKFASDDEHDEHDENGAtGPVK (R) KT(0.0)KFAS(0.0)DDEHDEHDENGAT(0.99)GPVK K:TMT10,t:Phosphorylated T SSB 47007.4 2 3 1184.1 168.81 HUMAN 1 2.4318 2.8006 EHDLEVASEEEQERE-p E7ESJ3;S546-p EHDLEVASEEEQERE 0.546890359308701 0.110793235772177 0.0816666666666667 0.277 4.83750250053306 12.6140901544057 0.0816666666666667 0.277 0.328284025300722 0.0547760844669375 1.07419371392298 2.44046324993879 E7ESJ3 NotFound E7ESJ3.S546.p_NotFound E7ESJ3_S546s _1_1_546_546 E7ESJ3 E7ESJ3|Q9UPS8-3 Ankyrin repeat domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9523.9523.4 26.57 21.22 3.176 2 1 1 0 944.9179 3696.6695 S546s TMT10 537 (K) AAEHDLEVAsEEEQEREGSENNQPQVEEER (K) AAEHDLEVAS(0.99)EEEQEREGS(0.0)ENNQPQVEEER s:Phosphorylated S ANKRD26 199524.4 4 6 812.1 221.02 HUMAN 1 4.8375 12.6141 EHDLRGQTQEEEVRP-p O15234;T197-p EHDLRGQTQEEEVRP 0.817861119602081 0.0939018713289767 -0.0483333333333333 -0.207 1.67971574454268 13.5872711422788 -0.0483333333333333 -0.207 0.679248089469787 0.0437797105372061 -0.436643585433986 -2.61593461022821 O15234 CASC3 O15234.T197.p_CASC3 O15234_T197t _1_1_197_197 O15234 O15234 Protein CASC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16360.16360.5 14.83 14.83 99 1 1 1 0 591.5059 2873.531 T197t TMT10 186 (K) GLFFEHDLRGQtQEEEVRPK (G) GLFFEHDLRGQT(1.0)QEEEVRPK K:TMT10,t:Phosphorylated T CASC3 76390.7 1 6 323.1 362.08 HUMAN 1 -1.6797 -13.5873 EHDSAEGSHVSGQSN-p Q9H9G7;S829-p EHDSAEGSHVSGQSN 0.167474891729899 0.0847774187878305 0.266333333333333 0.361 15.5078146021565 14.1858964056816 0.266333333333333 0.361 0.0281331615310253 0.0381426057894725 2.9742459334724 2.72545233086145 Q9H9G7 AGO3 Q9H9G7.S829.p_AGO3 Q9H9G7_S825sS829sS832s_3_3_825_832 Q9H9G7 Q9H9G7|Q9H9G7-2 Protein argonaute-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11423.11423.5 8.09 8.09 2.469 5 3 3 0 832.7891 3920.0254 S825s S829s S832s TMT10 816 (R) YHLVDKEHDsAEGsHVsGQSNGRDPQALAK (A) Y(0.0)HLVDKEHDS(0.99)AEGS(0.99)HVS(0.99)GQS(0.0)NGRDPQALAK K:TMT10,s:Phosphorylated S AGO3 98556.6 1 1 7033.1 8.09 HUMAN 1 15.5078 14.1859 EHEDSGDSEVENEAK-p Q9Y5J1;S124-p EHEDSGDSEVENEAK 0.589224306297175 0.0980923575295458 0.0713333333333333 -0.177666666666667 4.23041468145279 13.3300990008466 0.0713333333333333 -0.177666666666667 0.377536140568719 0.0464504686352003 0.960925223855202 -2.56926995925463 Q9Y5J1 UTP18 Q9Y5J1.S124.p_UTP18 Q9Y5J1_S121sS124s_2_2_121_124 Q9Y5J1 Q9Y5J1 U3 small nucleolar RNA-associated protein 18 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9689.10269.3 18.84 18.84 99 2 2 2 0 840.6922 2360.1254 S121s S124s TMT10 115 (R) VQEHEDsGDsEVENEAK (G) VQEHEDS(1.0)GDS(1.0)EVENEAK K:TMT10,s:Phosphorylated S UTP18 62458.9 13 3 2737.1 72.25 HUMAN 1 4.2304 -13.3301 EHEEDSGSDLDHDLS-p Q13796;S1427-p EHEEDSGSDLDHDLS 0.93707060991058 0.143220511057626 -0.013 0.18 0.547938750891033 11.1203737482954 -0.013 0.18 0.881467135803869 0.0772614092050637 -0.156293668670681 2.17621779166171 Q13796 SHROOM2 Q13796.S1427.p_SHROOM2 Q13796_S1425sS1427s_2_2_1425_1427 Q13796 Q13796|F5H3B6 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16254.16254.4 15.36 15.36 6.616 3 2 2 0 818.6096 3111.4755 S1425s S1427s TMT10 1414 (K) DLQEQQEHEEDsGsDLDHDLSVK (K) DLQEQQEHEEDS(0.99)GS(0.99)DLDHDLS(0.0)VK K:TMT10,s:Phosphorylated S SHROOM2 177605.1 2 33 90.1 622.62 HUMAN 1 -0.5479 11.1204 EHEEGRDSEEGPRCG-p Q7Z4V5-4;S630-p EHEEGRDSEEGPRCG 0.635993227924701 0.00586714020699583 -0.130333333333333 0.559666666666667 3.66536750039881 32.2491940440536 -0.130333333333333 0.559666666666667 0.429994845886722 0.000595772695703934 -0.852598249300456 7.1342887123429 Q7Z4V5 HDGFRP2 Q7Z4V5.4.S630.p_HDGFRP2 Q7Z4V5-4_S630s_1_1_630_630 Q7Z4V5-4 Q7Z4V5-3|Q7Z4V5-4|Q7Z4V5-2 Isoform 4 of Hepatoma-derived growth factor-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10599.10599.5 18.5 14.79 4.229 7 1 1 0 1074.114 5285.6088 N608n S630s TMT10 595 (K) AEDKPSTDLSAPVnGEATSQKGESAEDKEHEEGRDsEEGPR (C) AEDKPS(0.0)T(0.0)DLS(0.0)APVN(1.0)GEAT(0.0)S(0.0)QKGES(0.0)AEDKEHEEGRDS(0.99)EEGPR K:TMT10,n:Deamidated,s:Phosphorylated S HDGFL2 74899.1 2 11 712.1 238.42 HUMAN 1 -3.6654 32.2492 EHFEDMASDEDMKPK-p Q99856;S119-p EHFEDMASDEDMKPK 0.0530637440823008 0.584928103547121 0.428 0.149666666666667 27.707959421337 3.14540137008795 0.428 0.149666666666667 0.00169513409008253 0.484685316481199 5.76396223070209 0.749685163502952 Q99856 ARID3A Q99856.S119.p_ARID3A Q99856_S119s _1_1_119_119 Q99856 Q99856 AT-rich interactive domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14821.14821.4 16.28 16.28 99 1 1 1 0 762.1024 2965.4163 S119s TMT10 107 (R) EGPGEEHFEDMAsDEDMKPK (W) EGPGEEHFEDMAS(1.0)DEDMKPK K:TMT10,s:Phosphorylated S ARID3A 62944.9 1 4 2804.1 70.06 HUMAN 1 27.708 3.1454 EHGGLIRSPRHEKKK-p P26368;S79-p EHGGLIRSPRHEKKK 0.199418709267342 0.134683018480393 -0.280333333333333 0.177333333333333 13.6187743956847 11.4755074789379 -0.280333333333333 0.177333333333333 0.0434632862790673 0.0711949602870677 -2.62318742435084 2.23857439868216 P26368 U2AF2 P26368.S79.p_U2AF2 P26368_S79s _1_1_79_79 P26368 P26368|P26368-2 Splicing factor U2AF 65 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3932.3932.5 16.66 16.66 99 1 1 1 0 437.4356 2103.1823 S79s TMT10 71 (K) EEHGGLIRsPRHEK (K) EEHGGLIRS(1.0)PRHEK K:TMT10,s:Phosphorylated S U2AF2 53842.4 31 2 958.1 194.87 HUMAN 1 -13.6188 11.4755 EHGKSGCSDLEEAVD-p Q92538-3;S662-p EHGKSGCSDLEEAVD 0.182149770013788 0.934261536950379 -0.229666666666667 0.00933333333333334 14.5553134695224 0.417084161460103 -0.229666666666667 0.00933333333333334 0.0350323001416332 0.908430242484327 -2.79545844019589 0.120495091782946 Q92538 GBF1 Q92538.3.S662.p_GBF1 Q92538-3_S662s _1_1_662_662 Q92538-3 Q92538|Q92538-2|Q92538-3 Isoform 3 of Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16924.16924.3 12.05 12.05 1.132 3 1 1 0 845.749 2455.2589 S662s TMT10 659 (K) SGCsDLEEAVDSGADKK (F) S(0.0)GCS(0.99)DLEEAVDS(0.0)GADKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GBF1 208066.7 3 6 543.1 276.05 HUMAN 1 -14.5553 0.4171 EHGLSPDSENFDWKA-p P25054;S2096-p EHGLSPDSENFDWKA 0.204437813280498 0.0263681512688514 -0.262666666666667 -0.297666666666667 13.3439035402459 21.441446785675 -0.262666666666667 -0.297666666666667 0.0463030549969103 0.00717555208901824 -2.57322512135758 -4.19107022276324 P25054 APC P25054.S2096.p_APC P25054_S2088sS2093sS2096s_3_3_2088_2096 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22049.22049.4 10 10 99 3 3 3 0 793.3399 2930.4321 S2088s S2093s S2096s TMT10 2082 (K) DIQRPDsEHGLsPDsENFDWK (A) DIQRPDS(1.0)EHGLS(1.0)PDS(1.0)ENFDWK K:TMT10,s:Phosphorylated S APC 313808.5 1 72 33.1 890.71 HUMAN 1 -13.3439 -21.4414 EHHAGGDSQKDIMQR-p Q86SF2;S103-p EHHAGGDSQKDIMQR 0.603140826850623 0.187952516060411 -0.0796666666666667 -0.168 4.05468513826955 9.54980696542599 -0.0796666666666667 -0.168 0.393125745330732 0.110922411679749 -0.927568380147233 -1.90286031583665 Q86SF2 GALNT7 Q86SF2.S103.p_GALNT7 Q86SF2_S103s _1_1_103_103 Q86SF2 Q86SF2|E9PBY3 N-acetylgalactosaminyltransferase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.4779.4779.5 19.92 15.42 99 1 1 1 0 610.1082 2966.547 S103s TMT10 91 (K) AKNEQEHHAGGDsQKDIMQR (Q) AKNEQEHHAGGDS(1.0)QKDIMQR K:TMT10,s:Phosphorylated S GALNT7 76072.4 4 1 5373.1 19.92 HUMAN 1 -4.0547 -9.5498 EHHCLLHSPIPVNCP-p Q9NUJ1;S233-p EHHCLLHSPIPVNCP 0.569737548726187 0.489160160327223 0.088 -0.0756666666666667 4.49545279879449 4.15098644675409 0.088 -0.0756666666666667 0.355185084679416 0.384504436649906 1.01072798860242 -0.945718331430679 Q9NUJ1 ABHD10 Q9NUJ1.S233.p_ABHD10 Q9NUJ1_S233s _1_1_233_233 Q9NUJ1 Q9NUJ1|Q9NUJ1-2 Mycophenolic acid acyl-glucuronide esterase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12626.12626.4 16.31 16.31 99 1 1 1 0 647.8181 2508.2801 S233s TMT10 224 (K) EAEHHCLLHsPIPVNCPIR (L) EAEHHCLLHS(1.0)PIPVNCPIR C:Carbamidomethylation,s:Phosphorylated S ABHD10 34274.2 1 1 5784.1 16.31 HUMAN 1 4.4955 -4.151 EHHELEQSLVKGSPP-p Q9BXW6;S460-p EHHELEQSLVKGSPP 0.059451744552319 0.00117984223282173 0.474333333333333 1.074 26.7876976731746 48.4101136741217 0.474333333333333 1.074 0.00209522290271963 1.44207760546606e-05 5.51126591049631 14.6475238587285 Q9BXW6 OSBPL1A Q9BXW6.S460.p_OSBPL1A Q9BXW6_S460s _1_1_460_460 Q9BXW6 Q9BXW6 Oxysterol-binding protein-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.32435.32435.4 20.92 18.76 2.835 4 1 1 0 757.9066 2948.6345 S460s TMT10 442 (K) ILSEALETLATEHHELEQsLVK (G) ILS(0.0)EALET(0.0)LAT(0.0)EHHELEQS(0.99)LVK K:TMT10,s:Phosphorylated S OSBPL1A 109837.2 1 1 1553.1 132.3 HUMAN 1 26.7877 48.4101 EHKDPKATPP_____-p P48382;T614-p EHKDPKATPP_____ 0.194002306690035 0.21013596182249 0.230333333333333 0.125333333333333 13.8938652913739 8.9130222036901 0.230333333333333 0.125333333333333 0.0407956137124753 0.128439255536514 2.67345259363708 1.79266850198483 P48382 RFX5 P48382.T614.p_RFX5 P48382_T614t _1_1_614_614 P48382 P48382|P48382-2 DNA-binding protein RFX5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11069.11069.4 11.66 11.66 3.637 4 1 1 0 749.6497 2915.6194 T614t TMT10 597 (K) EHVLQSSLSQEHKDPKAtPP (-) EHVLQS(0.0)S(0.0)LS(0.0)QEHKDPKAT(0.99)PP K:TMT10,t:Phosphorylated T RFX5 65721.2 2 7 1365.1 149.8 HUMAN 1 13.8939 8.913 EHKELSNSPLRENSF-p Q9UQ35;S1320-p EHKELSNSPLRENSF 0.347574855103594 0.030064728227214 -0.159333333333333 0.299333333333333 8.52727650604791 20.5950795054014 -0.159333333333333 0.299333333333333 0.140369369567387 0.00871950938513689 -1.7265295948002 4.00395097664223 Q9UQ35 SRRM2 Q9UQ35.S1320.p_SRRM2 Q9UQ35_S1320s _1_1_1320_1320 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22488.22694.4 20.87 20.87 2.291 4 1 1 0 622.8074 2408.2408 S1320s TMT10 1316 (K) ELSNsPLRENSFGSPLEFR (N) ELS(0.0)NS(0.99)PLRENS(0.0)FGS(0.0)PLEFR s:Phosphorylated S SRRM2 300351.7 20 74 2.1 3310.34 HUMAN 1 -8.5273 20.5951 EHLSSFSSDEDDPGY-p Q2KHR3;S1231-p EHLSSFSSDEDDPGY 0.456457635068981 0.567866779963253 0.101333333333333 -0.0576666666666667 6.2761765800007 3.31281621445742 0.101333333333333 -0.0576666666666667 0.235712352330478 0.466356869705735 1.3336166768888 -0.783146489280291 Q2KHR3 QSER1 Q2KHR3.S1231.p_QSER1 Q2KHR3_S1230sS1231s_2_2_1230_1231 Q2KHR3 Q2KHR3|Q2KHR3-2 Glutamine and serine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20997.20997.3 21.58 21.58 2.22 7 2 2 0 1074.794 3062.4267 S1230s S1231s TMT10 1222 (K) NLEHLSSFssDEDDPGYSQDAYK (S) NLEHLS(0.0)S(0.0)FS(0.99)S(0.99)DEDDPGY(0.0)S(0.0)QDAY(0.0)K K:TMT10,s:Phosphorylated S QSER1 190710.4 2 8 748.1 232.52 HUMAN 1 6.2762 -3.3128 EHNGVPPSPDRAPPS-p Q8NAX2;S137-p EHNGVPPSPDRAPPS 0.234039816931884 0.308101385902056 0.198666666666667 0.176 12.0927392790336 6.7574415891996 0.198666666666667 0.176 0.0617626713957226 0.210987069999514 2.34879479787549 1.41810593715233 Q8NAX2 KDF1 Q8NAX2.S137.p_KDF1 Q8NAX2_S137s _1_1_137_137 Q8NAX2 Q8NAX2 Keratinocyte differentiation factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3760.3760.4 13.14 13.14 2.086 2 1 1 0 545.2751 2098.1103 S137s TMT10 130 (K) EHNGVPPsPDRAPPSRR (D) EHNGVPPS(0.99)PDRAPPS(0.0)RR s:Phosphorylated S KDF1 44496.8 4 1 2331.1 87.55 HUMAN 1 12.0927 6.7574 EHPAYLASDEITTVR-p O60313-10;S866-p EHPAYLASDEITTVR 0.23797684518109 0.153490733848371 0.21 0.155666666666667 11.9268020659564 10.7018191601192 0.21 0.155666666666667 0.0641681906114124 0.0850781590630677 2.31935802076707 2.10303022295678 O60313 OPA1 O60313.10.S866.p_OPA1 O60313-10_S866s _1_1_866_866 O60313-10 O60313-10|O60313-2|E5KLJ9|O60313-11|O60313-9|O60313-13 Isoform 4 of Dynamin-like 120 kDa protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13730.13730.4 19.76 19.76 2.559 4 1 1 0 693.5929 2691.3812 S866s TMT10 856 (K) CNEEHPAYLAsDEITTVRK (N) CNEEHPAY(0.0)LAS(0.99)DEIT(0.0)T(0.0)VRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S OPA1 118312 1 7 1733.1 118.69 HUMAN 1 11.9268 10.7018 EHPPLSSSPVEHEGV-p Q6ZMS4;S145-p EHPPLSSSPVEHEGV 0.775124418170112 0.00423666321237395 0.0416666666666667 0.684666666666667 2.11850146215922 34.8914337073209 0.0416666666666667 0.684666666666667 0.613973820954808 0.000324232562952697 0.53488799766844 8.05433165291941 Q6ZMS4 ZNF852 Q6ZMS4.S145.p_ZNF852 Q6ZMS4_S145s _1_1_145_145 Q6ZMS4 Q6ZMS4 Zinc finger protein 852 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15036.15036.4 20.76 20.76 1.151 3 1 1 0 685.1019 2657.4187 S145s TMT10 135 (K) EVEEHPPLSSsPVEHEGVLK (G) EVEEHPPLS(0.0)S(0.0)S(0.99)PVEHEGVLK K:TMT10,s:Phosphorylated S ZNF852 63680.3 2 84 240.6 415.72 HUMAN 1 2.1185 34.8914 EHQKVYTYIQSRFYR-p Q9NR20-4;Y388-p EHQKVYTYIQSRFYR 0.039271926938295 0.00554351977683076 -0.751 -0.716666666666667 31.7859544265638 32.704393059185 -0.751 -0.716666666666667 0.000662833664130502 0.000536488842280775 -6.99445264349899 -7.2861069933895 Q9NR20 DYRK4 Q9NR20.4.Y388.p_DYRK4 Q9NR20-4_Y388y _1_1_388_388 Q9NR20-4 Q9NR20-4|Q9NR20-3|A0A0A0MTH5|Q92630|Q92630-2|Q9NR20-2|Q9NR20-5 Isoform 4 of Dual specificity tyrosine-phosphorylation-regulated kinase 4 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.15100.15266.2 19.6 9.56 3.977 4 1 1 0 669.8371 1258.6993 Y388y TMT10 385 (K) VYTyIQSR (F) VY(0.0)T(0.0)Y(0.99)IQS(0.0)R y:Phosphorylated Y DYRK4 74195.2 4 1 179.1 19.6 HUMAN 1 -31.786 -32.7044 EHQLSLRTVSLGAGA-p P06748;T46-p EHQLSLRTVSLGAGA 0.310241942410331 0.451376038979078 0.464666666666667 0.622 9.50169592238666 4.60513210173255 0.464666666666667 0.622 0.112158039100406 0.346327350019265 1.89525218634976 1.03097786915179 P06748 NPM1 P06748.T46.p_NPM1 P06748_T46tS70s_2_2_46_70 P06748 P06748|P06748-2|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31271.31271.5 10.44 10.44 2.249 4 2 2 0 713.7593 3387.787 T46t M65m N66n S70s Hydrogen 46 (R) tVSLGAGAKDELHIVEAEAmnYEGsPIK (V) T(0.99)VS(0.0)LGAGAKDELHIVEAEAM(1.0)N(1.0)Y(0.0)EGS(0.99)PIK K:TMT10-Lys-Only,t:Phosphorylated T,m:Oxidized methionine,n:Deamidated,s:Phosphorylated S NPM1 32745.6 2 25 78.1 640.75 HUMAN 1 9.5017 4.6051 EHQTSAYSPPRAGQE-p Q96K21;S463-p EHQTSAYSPPRAGQE 0.917780326740951 0.233077536653817 -0.025 0.269 0.727591691962509 8.32880481152148 -0.025 0.269 0.845747710516746 0.146933058519019 -0.204078857627364 1.69159723956081 Q96K21 ZFYVE19 Q96K21.S463.p_ZFYVE19 Q96K21_S463s _1_1_463_463 Q96K21 Q96K21|Q96K21-2|H3BRF9|Q96K21-3|Q96K21-4 Abscission/NoCut checkpoint regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4666.4666.3 18.39 18.39 1.1 4 1 1 0 701.9867 2023.9783 S463s TMT10 456 (K) EHQTSAYsPPRAGQEH (-) EHQT(0.0)S(0.0)AY(0.0)S(0.99)PPRAGQEH s:Phosphorylated S ZFYVE19 52458.3 2 6 971.1 193.47 HUMAN 1 -0.7276 8.3288 EHRQDNDTGNEEQEE-p Q13206;T577-p EHRQDNDTGNEEQEE 0.233156511585054 0.0553195660854907 -0.177666666666667 -0.238333333333333 12.1483708438455 16.7506156261822 -0.177666666666667 -0.238333333333333 0.0609765593921466 0.02113189467305 -2.35867938147763 -3.21127427231346 Q13206 DDX10 Q13206.T577.p_DDX10 Q13206_T577t_1_1_577_577 Q13206 Q13206|E9PIF2 Probable ATP-dependent RNA helicase DDX10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6292.6292.4 24.61 24.61 5.91 2 1 1 0 1083.9524 4236.8271 T577t M592m TMT10 565 (K) RLEGTEHRQDNDtGNEEQEEEEDDEEEmEEK (L) RLEGT(0.0)EHRQDNDT(0.99)GNEEQEEEEDDEEEM(1.0)EEK K:TMT10,t:Phosphorylated T,m:Oxidized methionine DDX10 101228.5 4 5 1925.1 106.76 HUMAN 1 -12.1484 -16.7506 EHSNPSPSQDTDGTK-p O60292;S102-p EHSNPSPSQDTDGTK 0.31256981829013 0.309418584672273 0.151666666666667 0.103333333333333 9.44969423624551 6.73390240502223 0.151666666666667 0.103333333333333 0.113509072858854 0.212133745219985 1.8862405460162 1.41397315790755 O60292 SIPA1L3 O60292.S102.p_SIPA1L3 O60292_S102s _1_1_102_102 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5462.5462.3 11.83 11.83 1.102 5 1 1 0 869.7543 2527.2789 S102s TMT10 91 (R) EALREHSNPSPsQDTDGTK (A) EALREHS(0.0)NPS(0.0)PS(0.99)QDT(0.0)DGT(0.0)K K:TMT10,s:Phosphorylated S SIPA1L3 195918.6 2 2 144.1 520.25 HUMAN 1 9.4497 6.7339 EHSPHPQSRTGTPER-p X6RAB3;S443-p EHSPHPQSRTGTPER 0.945731226553801 0.238401791161303 0.023 -0.193 0.476775449037757 8.20270267958161 0.023 -0.193 0.896029803105382 0.151261962963304 0.136939131865754 -1.66976351640184 X6RAB3 NotFound X6RAB3.S443.p_NotFound X6RAB3_S443s _1_1_443_443 X6RAB3 X6RAB3 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.2286.2286.4 7.36 7.36 7.362 2 1 1 0 419.9548 1596.8305 S443s TMT10 434 (R) RHEHSPHPQsR (T) RHEHS(0.0)PHPQS(0.99)R s:Phosphorylated S USP6NL 96835.5 1 3 364.1 342.41 HUMAN 1 0.4768 -8.2027 EHSPYGPSPLGWPSS-p Q96PC5;S1130-p EHSPYGPSPLGWPSS 0.151495606444267 0.232471995571074 0.344333333333333 -0.124666666666667 16.5052868889618 8.34554830865641 0.344333333333333 -0.124666666666667 0.0223599748692499 0.146367673269581 3.16582195082961 -1.69449554229295 Q96PC5 MIA2 Q96PC5.S1130.p_MIA2 Q96PC5_S1130s _1_1_1130_1130 Q96PC5 Q96PC5|G3V599|O15320-5|O15320-10|O15320-3|O15320-4|O15320-6|O15320-8|O15320-9 Melanoma inhibitory activity protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16404.16404.3 21.31 21.31 6.606 6 1 1 0 765.0214 2213.0825 S1130s TMT10 1123 (R) EHSPYGPsPLGWPSSETR (A) EHS(0.0)PY(0.0)GPS(0.99)PLGWPS(0.0)S(0.0)ET(0.0)R s:Phosphorylated S MIA2 160460.4 2 4 569.1 269.96 HUMAN 1 16.5053 -8.3455 EHSRRGRSYDSSMES-p Q9HCG8;S61-p EHSRRGRSYDSSMES 0.926672745884924 0.180847789121545 -0.0166666666666667 -0.134333333333333 0.653250237716781 9.76798404745816 -0.0166666666666667 -0.134333333333333 0.860349629917794 0.105487644609745 -0.184485469486874 -1.94066373511512 Q9HCG8 CWC22 Q9HCG8.S61.p_CWC22 Q9HCG8_S61s _1_1_61_61 Q9HCG8 Q9HCG8 Pre-mRNA-splicing factor CWC22 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4836.4836.3 14.37 14.37 4.603 5 1 1 0 528.5626 1503.7059 S61s TMT10 59 (R) GRsYDSSMESR (N) GRS(0.99)Y(0.0)DS(0.0)S(0.0)MES(0.0)R s:Phosphorylated S CWC22 106034.9 6 2 1128.1 174.64 HUMAN 1 -0.6533 -9.768 EHSTRQKSPEIHRRI-p Q9NYF8;S648-p EHSTRQKSPEIHRRI 0.371443889338769 0.0161015516805985 0.136333333333333 0.349 7.97680157578878 24.7690032636343 0.136333333333333 0.349 0.15933817639786 0.003335029452509 1.63113603114701 4.9793691527446 Q9NYF8 BCLAF1 Q9NYF8.S648.p_BCLAF1 Q9NYF8_S648s _1_1_648_648 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|Q9NYF8-4|A0A1W2PQ43 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.3219.3219.4 11.21 11.21 99 1 1 1 0 422.9889 1608.9698 S648s TMT10 646 (R) QKsPEIHRR (I) QKS(1.0)PEIHRR K:TMT10,s:Phosphorylated S BCLAF1 106234.3 44 34 10.1 1293.04 HUMAN 1 7.9768 24.769 EHVKMVRSGGIPVHL-p Q6UXL0;S185-p EHVKMVRSGGIPVHL 0.166553758928775 0.899420005172998 -0.26 -0.0196666666666666 15.5709857132803 0.644792164023035 -0.26 -0.0196666666666666 0.0277269071874831 0.862026830876613 -2.98624178450715 -0.182223226067958 Q6UXL0 IL20RB Q6UXL0.S185.p_IL20RB Q6UXL0_S185s _1_1_185_185 Q6UXL0 Q6UXL0 Interleukin-20 receptor subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22991.22991.4 8.13 3.19 2.278 3 1 1 0 1005.0114 3937.0175 S185s Hydrogen 173 (R) EPGAEEHVKMVRsGGIPVHLETMEPGAAYCVK (A) EPGAEEHVKMVRS(0.99)GGIPVHLET(0.0)MEPGAAY(0.0)CVK K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S IL20RB 35588.7 1 1 7019.1 8.13 HUMAN 1 -15.571 -0.6448 EHVPSDNS_______-p P62699;S121-p EHVPSDNS_______ 0.351485099137188 0.213130469918843 -0.174666666666667 0.180333333333333 8.43834220609912 8.83232739131681 -0.174666666666667 0.180333333333333 0.14327347000449 0.130848051819874 -1.71112939542052 1.7787115554365 P62699 YPEL5 P62699.S121.p_YPEL5 P62699_S118sS121s_2_2_118_121 P62699 P62699 Protein yippee-like 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11768.11768.2 12.92 12.92 12.921 3 2 2 0 976.3663 1791.7871 S118s S121s TMT10 108 (R) ESEGFEEHVPsDNs (-) ES(0.0)EGFEEHVPS(0.99)DNS(0.99) s:Phosphorylated S YPEL5 14069.6 2 2 5818.1 16.04 HUMAN 1 -8.4383 8.8323 EHWKTQRSEEYEAEG-p Q8N4C6-7;S152-p EHWKTQRSEEYEAEG 0.377818064461619 0.739378336281919 -0.144333333333333 0.0456666666666667 7.81449305786328 1.80907606169462 -0.144333333333333 0.0456666666666667 0.165405784793878 0.659314145886748 -1.60296276502766 0.466040507975743 Q8N4C6 NIN Q8N4C6.7.S152.p_NIN Q8N4C6-7_S152s _1_1_152_152 Q8N4C6-7 Q8N4C6-7|Q8N4C6-10|Q8N4C6-5|Q8N4C6-2|Q8N4C6-9 Isoform 7 of Ninein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7750.7750.3 14.78 14.78 1.123 3 1 1 0 668.9796 1924.9562 S152s TMT10 149 (K) TQRsEEYEAEGQLR (F) T(0.0)QRS(0.99)EEY(0.0)EAEGQLR s:Phosphorylated S NIN 250243.4 1 1 2284.1 89.71 HUMAN 1 -7.8145 1.8091 EIAKGYCTPLVRKIR-p A0A087WZV0;T780-p EIAKGYCTPLVRKIR 0.180968927163259 0.403129381958845 0.224 0.0926666666666667 14.6431631134691 5.24822447991172 0.224 0.0926666666666667 0.0343307814138357 0.298660337826433 2.81179018089423 1.14911601377884 A0A087WZV0 PPIP5K2 A0A087WZV0.T780.p_PPIP5K2 A0A087WZV0_T780t _1_1_780_780 A0A087WZV0 A0A087WZV0|O43314|O43314-2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11608.11608.2 7.91 3.54 1.176 2 1 1 0 637.8126 1194.6502 T780t TMT10 777 (K) GYCtPLVR (K) GY(0.0)CT(0.99)PLVR C:Carbamidomethylation,t:Phosphorylated T PPIP5K2 145671.7 1 3 778.1 226.58 HUMAN 1 14.6432 5.2482 EIAKPCVSDQEEDEE-p A6NIH7;S119-p EIAKPCVSDQEEDEE 0.148266672319898 0.164537842503167 0.248333333333333 0.144 16.7773960444316 10.3045225340374 0.248333333333333 0.144 0.0210019874950303 0.0932282960456375 3.21891868014182 2.03381880980207 A6NIH7 UNC119B A6NIH7.S119.p_UNC119B A6NIH7_S119s _1_1_119_119 A6NIH7 A6NIH7 Protein unc-119 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28485.28519.4 22.7 22.7 9 4 1 1 0 1169.3134 4594.2507 S119s TMT10 101 (K) IRDLETGTVLFEIAKPCVsDQEEDEEEGGGDVDISAGR (F) IRDLET(0.0)GT(0.0)VLFEIAKPCVS(0.99)DQEEDEEEGGGDVDIS(0.0)AGR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S UNC119B 28364.3 3 1 4273.1 34.41 HUMAN 1 16.7774 10.3045 EIALSLPSPEGLSLK-p Q86YN6;S638-p EIALSLPSPEGLSLK 0.351536663952324 0.0320849526179946 -0.232666666666667 -0.56 8.43460113854806 20.1547270919815 -0.232666666666667 -0.56 0.143396940754166 0.00964999949911931 -1.71048151031722 -3.90854187306322 Q86YN6 PPARGC1B Q86YN6.S638.p_PPARGC1B Q86YN6_S638s _1_1_638_638 Q86YN6 Q86YN6 Peroxisome proliferator-activated receptor gamma coactivator 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.32352.32352.3 13.57 13.57 4.373 3 1 1 0 698.0603 2012.2044 S638s TMT10 631 (K) EIALSLPsPEGLSLK (A) EIALS(0.0)LPS(0.99)PEGLS(0.0)LK K:TMT10,s:Phosphorylated S PPARGC1B 115103.2 1 2 3638.1 46.37 HUMAN 1 -8.4346 -20.1547 EIDEFANSPSEDKEE-p Q9P2D1;S1874-p EIDEFANSPSEDKEE 0.454010512408079 0.560890758971814 -0.202 -0.138666666666667 6.32760929862508 3.38556998815595 -0.202 -0.138666666666667 0.232937317659438 0.458609451823562 -1.34272141103123 -0.797574106585037 Q9P2D1 CHD7 Q9P2D1.S1874.p_CHD7 Q9P2D1_S1874s _1_1_1874_1874 Q9P2D1 Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21923.21923.5 18.16 18.16 1.731 5 1 1 0 856.4247 4198.1308 S1874s TMT10 1862 (R) TPFKDEIDEFANsPSEDKEESMEIHATGK (H) T(0.0)PFKDEIDEFANS(0.99)PS(0.0)EDKEES(0.0)MEIHAT(0.0)GK K:TMT10,s:Phosphorylated S CHD7 337747 4 5 256.1 399.25 HUMAN 1 -6.3276 -3.3856 EIDIKGPSLDIDTPD-p Q09666;S4425-p EIDIKGPSLDIDTPD 0.256598632633919 0.0636108372126125 -0.204666666666667 0.244 11.2230048623827 15.9321766387924 -0.204666666666667 0.244 0.0754569963724995 0.025514222358615 -2.19522488325608 3.0530323558975 Q09666 AHNAK Q09666.S4425.p_AHNAK Q09666_S4425s _1_1_4425_4425 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27248.27248.5 15.52 15.52 3.297 2 1 1 0 869.4717 4263.3418 S4425s TMT10 4410 (K) VEGDLKGPEIDIKGPsLDIDTPDVNIEGPEGK (L) VEGDLKGPEIDIKGPS(0.99)LDIDT(0.0)PDVNIEGPEGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 96 1.1 4313.36 HUMAN 1 -11.223 15.9322 EIEEVEESEDEGEDP-p Q8TBF4;S155-p EIEEVEESEDEGEDP 0.733794668453427 0.10048620458838 0.047 0.181333333333333 2.54428694699794 13.1856460205258 0.047 0.181333333333333 0.556636018887566 0.0480214642170998 0.626228193621712 2.54315455740399 Q8TBF4 ZCRB1 Q8TBF4.S155.p_ZCRB1 Q8TBF4_S155s _1_1_155_155 Q8TBF4 Q8TBF4|G3V1V1 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30030.30030.5 25.19 23.64 1.65 3 1 1 0 971.6685 4774.3561 S155s TMT10 141 (K) KAPEPEEEIEEVEEsEDEGEDPALDSLSQAIAFQQAK (I) KAPEPEEEIEEVEES(0.99)EDEGEDPALDS(0.0)LS(0.0)QAIAFQQAK K:TMT10,s:Phosphorylated S ZCRB1 24819.5 9 3 1826.1 112.48 HUMAN 1 2.5443 13.1856 EIEGKPESEGEPGSE-p Q96EI5-2;S245-p EIEGKPESEGEPGSE 0.691324386103875 0.362272965251925 0.0563333333333333 0.110333333333333 3.00583750549798 5.84961028044499 0.0563333333333334 0.110333333333333 0.500514022712272 0.260039290218703 0.721597712438077 1.25743405663165 Q96EI5 TCEAL4 Q96EI5.2.S245.p_TCEAL4 Q96EI5-2_S245s _1_1_245_245 Q96EI5-2 Q96EI5-2 Isoform 2 of Transcription elongation factor A protein-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8553.8553.4 17.63 17.63 5.3 3 1 1 0 695.8411 2700.3728 S245s Hydrogen 234 (R) EGKPEIEGKPEsEGEPGSETR (A) EGKPEIEGKPES(0.99)EGEPGS(0.0)ET(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S TCEAL4 40919.8 3 3 3257.1 55.73 HUMAN 1 3.0058 5.8496 EIEKFDKSKLKKTET-p P62328;S16-p EIEKFDKSKLKKTET 0.12069597861379 0.0396270507700793 0.414666666666667 -0.544666666666667 19.0856178013436 18.8019716678548 0.414666666666667 -0.544666666666667 0.0123434971147671 0.0131765839466034 3.68540384942966 -3.6232925621643 P62328 TMSB4X P62328.S16.p_TMSB4X P62328_S16s _1_1_16_16 P62328 P62328 Thymosin beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19409.19409.4 10.95 10.95 2.557 2 1 1 0 727.3913 2826.5729 S16s Acetyl 2 (M) SDKPDMAEIEKFDKsK (L) S(0.0)DKPDMAEIEKFDKS(0.99)K K:TMT10,s:Phosphorylated S TMSB4X 5052.6 3 2 2087.1 98.1 HUMAN 1 19.0856 -18.802 EIEKIMSSIGEGIDF-p Q92625;S677-p EIEKIMSSIGEGIDF 0.666069287714853 0.67642145532828 0.059 0.0493333333333333 3.29942948124972 2.31891605908718 0.059 0.0493333333333334 0.467796590190622 0.586284475014444 0.780600436992368 0.578253440318199 Q92625 ANKS1A Q92625.S677.p_ANKS1A Q92625_S677s _1_1_677_677 Q92625 Q92625 Ankyrin repeat and SAM domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24962.24962.2 12.12 5.54 1.167 3 1 1 0 989.4641 1897.9527 S677s TMT10 674 (K) IMSsIGEGIDFSQER (Q) IMS(0.0)S(0.99)IGEGIDFS(0.0)QER s:Phosphorylated S ANKS1A 124075.6 8 11 709.1 238.85 HUMAN 1 3.2994 2.3189 EIENLPQSPGTDQHD-p Q9HCM4;S436-p EIENLPQSPGTDQHD 0.348845900553004 0.839140711888613 0.143333333333333 -0.0203333333333333 8.49864949663615 1.07134087825083 0.143333333333333 -0.0203333333333333 0.141297686250955 0.781386515327472 1.7215727508517 -0.291650019525035 Q9HCM4 EPB41L5 Q9HCM4.S436.p_EPB41L5 Q9HCM4_S436s _1_1_436_436 Q9HCM4 Q9HCM4|Q9HCM4-3|Q9HCM4-4|Q9HCM4-2 Band 4.1-like protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24745.24745.4 20.78 20.78 2.365 7 1 1 0 998.5211 3911.0915 S436s TMT10 413 (R) SALPVSPSISSAPVPVEIENLPQsPGTDQHDRK (C) S(0.0)ALPVS(0.0)PS(0.0)IS(0.0)S(0.0)APVPVEIENLPQS(0.99)PGT(0.0)DQHDRK K:TMT10,s:Phosphorylated S EPB41L5 82425.3 5 3 3030.1 62.71 HUMAN 1 8.4986 -1.0713 EIEPSPETPPPPASS-p O00139-4;T78-p EIEPSPETPPPPASS 0.771408500809374 0.36368266658254 0.048 0.0956666666666667 2.16148450858701 5.82393964756674 0.048 0.0956666666666667 0.607927163649664 0.261580903347873 0.544274218132459 1.25284576896229 O00139 KIF2A O00139.4.T78.p_KIF2A O00139-4_T78t _1_1_78_78 O00139-4 O00139-4 Isoform 4 of Kinesin-like protein KIF2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36863.36863.4 28.88 23.36 1.172 6 1 1 0 1075.2876 4218.1634 T78t TMT10 53 (K) EIDLESIFSLNPDLVPDEEIEPSPEtPPPPASSAK (V) EIDLES(0.0)IFS(0.0)LNPDLVPDEEIEPS(0.0)PET(0.99)PPPPAS(0.0)S(0.0)AK K:TMT10,t:Phosphorylated T KIF2A 84772.1 4 1 1020.1 187.91 HUMAN 1 2.1615 5.8239 EIESDSESDGELQDR-p Q9BYW2;S1417-p EIESDSESDGELQDR 0.867635849079879 0.0775282848153013 -0.028 0.202666666666667 1.20129741506794 14.7332445255417 -0.028 0.202666666666667 0.758350990759107 0.0336260262326801 -0.323636515948767 2.82676459992213 Q9BYW2 SETD2 Q9BYW2.S1417.p_SETD2 Q9BYW2_S1413sS1415sS1417s_3_3_1413_1417 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7629.7629.3 9.65 9.65 99 3 3 3 0 864.0187 2350.132 S1413s S1415s S1417s Hydrogen 1408 (R) RQEIEsDsEsDGELQDRK (K) RQEIES(1.0)DS(1.0)ES(1.0)DGELQDRK K:TMT10-Lys-Only,s:Phosphorylated S SETD2 290615.4 3 38 58.1 711.11 HUMAN 1 -1.2013 14.7332 EIESEIDSEEELINK-p Q14566;S762-p EIESEIDSEEELINK 0.671374778439016 0.00282908514086735 -0.0883333333333333 0.768666666666667 3.24040695421766 38.5537132939255 -0.0883333333333334 0.768666666666667 0.47419754865279 0.000139517495190304 -0.768832644059926 9.49949311873518 Q14566 MCM6 Q14566.S762.p_MCM6 Q14566_S762s _1_1_762_762 Q14566 Q14566 DNA replication licensing factor MCM6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19619.19619.4 22.34 16.77 5.519 2 1 1 0 707.8785 2748.5234 S762s TMT10 755 (K) EIESEIDsEEELINKKR (I) EIES(0.0)EIDS(0.99)EEELINKKR K:TMT10,s:Phosphorylated S MCM6 93857.5 6 8 1039.1 185.36 HUMAN 1 -3.2404 38.5537 EIESRVGSGSLDNLG-p Q13136;S666-p EIESRVGSGSLDNLG 0.25414491835742 0.282474312073195 0.186666666666667 -0.227 11.3273709602952 7.23903042298356 0.186666666666667 -0.227 0.0736652901834987 0.188841289655991 2.21356448463538 -1.50236338869686 Q13136 PPFIA1 Q13136.S666.p_PPFIA1 Q13136_S666sS668s_2_2_666_668 Q13136 Q13136|Q13136-2 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16555.16555.2 7.9 7.9 99 2 2 2 0 732.3284 1303.7167 S666s S668s TMT10 664 (R) VGsGsLDNLGR (F) VGS(1.0)GS(1.0)LDNLGR s:Phosphorylated S PPFIA1 136347 1 38 248.1 410.18 HUMAN 1 11.3274 -7.239 EIEVMAKSIDFPLTK-p O75844;S244-p EIEVMAKSIDFPLTK 0.194757567047236 0.490692140224756 -0.239666666666667 0.0806666666666667 13.8620196416708 4.13189136590564 -0.239666666666667 0.0806666666666667 0.0410958564620729 0.386198749674585 -2.66761986229842 0.942094814566504 O75844 ZMPSTE24 O75844.S244.p_ZMPSTE24 O75844_S244s _1_1_244_244 O75844 O75844 CAAX prenyl protease 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25322.25322.2 9.98 9.98 4.543 2 1 1 0 729.9049 1378.8346 S244s TMT10 244 (K) sIDFPLTK (V) S(0.99)IDFPLT(0.0)K K:TMT10,s:Phosphorylated S ZMPSTE24 55097.1 1 1 6718.1 9.98 HUMAN 1 -13.862 4.1319 EIFKQRFSEENSKTD-p Q9NQ38-3;S270-p EIFKQRFSEENSKTD 0.271805915294563 0.00647611080454284 -0.347 0.705666666666667 10.7190314590827 31.4744660024947 -0.347 0.705666666666667 0.0847416379452841 0.000712120355133188 -2.1069556813969 6.88196256738054 Q9NQ38 SPINK5 Q9NQ38.3.S270.p_SPINK5 Q9NQ38-3_S270s _1_1_270_270 Q9NQ38-3 Q9NQ38-3|Q9NQ38-2 Isoform long of Serine protease inhibitor Kazal-type 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5522.5522.3 9.32 9.32 9.318 2 1 1 0 554.9465 1582.8589 S270s TMT10 267 (K) QRFsEENSK (T) QRFS(0.99)EENS(0.0)K K:TMT10,s:Phosphorylated S SPINK5 127839.7 1 1 4939.1 24.86 HUMAN 1 -10.719 31.4745 EIFQKKVSPPGPALN-p P49910;S153-p EIFQKKVSPPGPALN 0.234058938491699 0.652137445248403 0.183333333333333 -0.0556666666666666 12.0904877853683 2.53545895391228 0.183333333333333 -0.0556666666666667 0.0617946990454185 0.557768655126254 2.34839492213575 -0.624289235343611 P49910 ZNF165 P49910.S153.p_ZNF165 P49910_S153s _1_1_153_153 P49910 P49910 Zinc finger protein 165 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16294.16294.3 15.49 15.49 99 1 1 1 0 658.731 1894.2093 S153s TMT10 151 (K) KVsPPGPALNVK (L) KVS(1.0)PPGPALNVK K:TMT10,s:Phosphorylated S ZNF165 56967.7 2 1 4726.1 27.42 HUMAN 1 12.0905 -2.5355 EIHRKVMSQNFTNCH-p Q13283;S67-p EIHRKVMSQNFTNCH 0.277376112423951 0.964565708936569 -0.177666666666667 0.00533333333333336 10.5360549631979 0.22389138771113 -0.177666666666667 0.00533333333333336 0.0883882435478784 0.949753409356995 -2.07501521704367 0.065986431421797 Q13283 G3BP1 Q13283.S67.p_G3BP1 Q13283_S67s _1_1_67_67 Q13283 Q13283|E5RJU8|Q13283-2 Ras GTPase-activating protein-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11682.11682.4 15.9 15.9 3.119 3 1 1 0 501.9926 1924.9774 S67s TMT10 65 (K) VMsQNFTNCHTK (I) VMS(0.99)QNFT(0.0)NCHT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S G3BP1 52220.4 3 2 1003.1 189.39 HUMAN 1 -10.5361 0.2239 EIIKQEESVDPDYWE-p F5GWX5;S1301-p EIIKQEESVDPDYWE 0.221440669353428 0.0646999365428139 0.373333333333333 -0.244 12.6031670102978 15.8251305383943 0.373333333333333 -0.244 0.0549140277659468 0.0261509184363466 2.43979954569635 -3.03257121684666 F5GWX5 CHD4 F5GWX5.S1301.p_CHD4 F5GWX5_S1301s _1_1_1301_1301 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20999.20999.3 15.36 12.11 3.463 2 1 1 0 925.8065 2695.4434 S1301s TMT10 1294 (R) EIIKQEEsVDPDYWEK (L) EIIKQEES(0.99)VDPDY(0.0)WEK K:TMT10,s:Phosphorylated S CHD4 218583 1 15 49.1 753.68 HUMAN 1 12.6032 -15.8251 EIISPPASPPEMVGQ-p E9PGC8;S2039-p EIISPPASPPEMVGQ 0.506609842161293 0.253375819330346 0.157666666666667 -0.123 5.44857804010715 7.85323932790484 0.157666666666667 -0.123 0.285195189607947 0.163936654173244 1.18566425961978 -1.60919061413302 E9PGC8 NotFound E9PGC8.S2039.p_NotFound E9PGC8_S2039s _1_1_2039_2039 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29239.29239.3 15.03 15.03 1.76 3 1 1 0 783.3911 2268.1896 S2039s TMT10 2029 (R) SPFEIISPPAsPPEMVGQR (V) S(0.0)PFEIIS(0.0)PPAS(0.99)PPEMVGQR s:Phosphorylated S MAP1A 332906.7 2 31 20.1 1016.98 HUMAN 1 5.4486 -7.8532 EIKELKQSREIVLED-p Q8TDY2;S954-p EIKELKQSREIVLED 0.0144448951231044 0.00123467326444358 1.106 1.23966666666667 44.0309898112405 47.7484927907424 1.106 1.23966666666667 3.95276521356556e-05 1.67938674440233e-05 12.133792983898 14.2327230775519 Q8TDY2 RB1CC1 Q8TDY2.S954.p_RB1CC1 Q8TDY2_S954s _1_1_954_954 Q8TDY2 Q8TDY2|Q8TDY2-2 RB1-inducible coiled-coil protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19156.19156.4 7.85 2.88 99 1 1 1 0 617.6086 2387.4477 S954s TMT10 950 (K) ELKQsREIVLEDLK (K) ELKQS(1.0)REIVLEDLK K:TMT10,s:Phosphorylated S RB1CC1 185198.6 1 11 707.1 238.96 HUMAN 1 44.031 47.7485 EIKENQRSPVRVKER-p Q13427;S397-p EIKENQRSPVRVKER 0.934377786071211 0.10223977423908 -0.0156666666666667 0.248333333333333 0.579497994277548 13.0834586577323 -0.0156666666666667 0.248333333333333 0.87508492140083 0.0491647838583617 -0.164797271290637 2.52472079538381 Q13427 PPIG Q13427.S397.p_PPIG Q13427_S397s _1_1_397_397 Q13427 Q13427|E9PG73 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12515.12515.5 13.62 13.62 4.284 2 1 1 0 559.5181 2713.5928 S397s TMT10 386 (K) SELNEIKENQRsPVRVK (E) S(0.0)ELNEIKENQRS(0.99)PVRVK K:TMT10,s:Phosphorylated S PPIG 89129.1 14 6 112.1 571.91 HUMAN 1 -0.5795 13.0835 EIKHSTPSPTRYSLS-p P49792;S781-p EIKHSTPSPTRYSLS 0.297184072075513 0.0131822884002457 0.192666666666667 0.411666666666667 9.92544888987813 26.1812972178329 0.192666666666667 0.411666666666667 0.101731421042288 0.00240918570840744 1.96876123790349 5.3422382309363 P49792 RANBP2 P49792.S781.p_RANBP2 P49792_S781s _1_1_781_781 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9259.9259.3 15.22 15.22 1.297 8 1 1 0 728.381 2103.1599 S781s TMT10 777 (K) HSTPsPTRYSLSPSK (S) HS(0.0)T(0.0)PS(0.99)PT(0.0)RY(0.0)S(0.0)LS(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S RANBP2 362585.9 6 10 9.1 1298.62 HUMAN 1 9.9254 26.1813 EIKKGRITPSQVKMS-p C9JJN9;T1331-p EIKKGRITPSQVKMS 0.814399806622497 0.122962378993277 -0.034 -0.201666666666667 1.71106190477903 12.0070538747432 -0.034 -0.201666666666667 0.674363117250546 0.0629933366102312 -0.443819320817952 -2.33242121732766 C9JJN9 NotFound C9JJN9.T1331.p_NotFound C9JJN9_T1331t _1_1_1331_1331 C9JJN9 Q8N3P4|C9JJN9|Q8N3P4-3|Q8N3P4-2 Vacuolar protein sorting-associated protein 8 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8016.8016.4 8.77 4.93 2.201 2 1 1 0 471.0386 1801.1627 T1331t TMT10 1327 (K) KGRItPSQVK (M) KGRIT(0.99)PS(0.0)QVK K:TMT10,t:Phosphorylated T VPS8 163852.7 2 4 2244.1 91.97 HUMAN 1 -1.7111 -12.0071 EIKKHHASISELKKN-p P11171;S684-p EIKKHHASISELKKN 0.0963407255186167 0.0144497591119477 -0.394 -0.648 21.5562004887964 25.5079372703801 -0.394 -0.648 0.00698843533801456 0.00281323669097819 -4.22117480512922 -5.16696225552948 P11171 EPB41 P11171.S684.p_EPB41 P11171_S684s _1_1_684_684 P11171 P11171|P11171-2|P11171-5|P11171-7|P11171-3|Q4VB86|P11171-4|P11171-6 Protein 4.1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7719.7719.5 14.01 14.01 2.694 2 1 1 0 455.6759 2194.3842 S684s TMT10 680 (K) KHHAsISELKK (N) KHHAS(0.99)IS(0.0)ELKK K:TMT10,s:Phosphorylated S EPB41 97585.6 4 28 469.3 302.69 HUMAN 1 -21.5562 -25.5079 EIKNFKPSPSKNKGM-p Q9BX63;S1237-p EIKNFKPSPSKNKGM 0.357141808419025 0.000952253650599092 -0.153333333333333 -1.62833333333333 8.31481331680374 54.6235593548774 -0.153333333333333 -1.62833333333333 0.147407190317423 3.44860985162545e-06 -1.68973296607455 -19.1555063897328 Q9BX63 BRIP1 Q9BX63.S1237.p_BRIP1 Q9BX63_S1237s _1_1_1237_1237 Q9BX63 Q9BX63 Fanconi anemia group J protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10442.10442.2 10.5 5.07 1.445 2 1 1 0 836.4739 1591.9775 S1237s TMT10 1233 (K) NFKPsPSK (N) NFKPS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S BRIP1 142871.9 6 12 837.1 214.97 HUMAN 1 -8.3148 -54.6236 EIKRIHFSPSEPKTS-p Q8IZT6;S605-p EIKRIHFSPSEPKTS 0.359180217185773 0.0270278748422748 -0.143333333333333 -0.609333333333333 8.26390483978122 21.282067997853 -0.143333333333333 -0.609333333333333 0.149145280763017 0.00744377436243961 -1.68091275296761 -4.15544845013458 Q8IZT6 ASPM Q8IZT6.S605.p_ASPM Q8IZT6_S605s _1_1_605_605 Q8IZT6 Q8IZT6|Q8IZT6-2 Abnormal spindle-like microcephaly-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14767.14767.3 14.66 14.66 2.167 2 1 1 0 527.2812 1499.8622 S605s TMT10 602 (R) IHFsPSEPK (T) IHFS(0.99)PS(0.0)EPK K:TMT10,s:Phosphorylated S ASPM 413444.1 3 9 949.1 196.42 HUMAN 1 -8.2639 -21.2821 EIKTPASTPVSGTPQ-p Q9UHR4;T252-p EIKTPASTPVSGTPQ 0.182003668118224 0.169068246271342 0.23 -0.157666666666667 14.5631007230597 10.1541535970316 0.23 -0.157666666666667 0.034969540659409 0.096512738858842 2.79690488861577 -2.00767935709179 Q9UHR4 BAIAP2L1 Q9UHR4.T252.p_BAIAP2L1 Q9UHR4_T252t _1_1_252_252 Q9UHR4 Q9UHR4 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30879.30879.4 19.56 19.56 1.168 6 1 1 0 892.4606 3486.8411 T252t TMT10 239 (K) IMNMIEEIKTPAStPVSGTPQASPMIER (S) IMNMIEEIKT(0.0)PAS(0.0)T(0.99)PVS(0.0)GT(0.0)PQAS(0.0)PMIER K:TMT10,t:Phosphorylated T BAIAP2L1 57224 3 3 661.1 251.53 HUMAN 1 14.5631 -10.1542 EILEKLRSIVSVGDP-p Q13153-2;S259-p EILEKLRSIVSVGDP 0.134114210989623 0.0156734106482018 -0.270333333333333 -0.488666666666667 17.9649376836677 24.9502303895862 -0.270333333333333 -0.488666666666667 0.015977404546575 0.00319872541548544 -3.45517283980493 -5.02492722518805 Q13153 PAK1 Q13153.2.S259.p_PAK1 Q13153-2_S259s _1_1_259_259 Q13153-2 O75914-3|O75914-4|Q13153-2|O75914-2|A0A087X294|B3KNX7|E9PM17 Isoform 2 of Serine/threonine-protein kinase PAK 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16524.16524.4 12.05 12.05 4.617 2 1 1 0 517.3137 1986.2679 S259s TMT10 257 (K) LRsIVSVGDPKK (K) LRS(0.99)IVS(0.0)VGDPKK K:TMT10,s:Phosphorylated S PAK1 62087.3 2 11 272.2 393.22 HUMAN 1 -17.9649 -24.9502 EILGLQGSEVTTPDS-p Q8TC07-2;S616-p EILGLQGSEVTTPDS 0.940726562469484 0.149596605408162 0.011 0.168 0.521536901304571 10.8564300023122 0.011 0.168 0.886842116729183 0.0821026168870904 0.149142449935832 2.13002974236224 Q8TC07 TBC1D15 Q8TC07.2.S616.p_TBC1D15 Q8TC07-2_S616s_1_1_616_616 Q8TC07-2 Q8TC07|Q8TC07-3|Q8TC07-2 Isoform 2 of TBC1 domain family member 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.37158.37158.5 21.07 16.82 1.133 11 1 1 0 1195.3629 5874.8197 S616s N630n M633m N644n TMT10 602 (K) ELPQAVCEILGLQGsEVTTPDSDVGEDEnVVmTPCPTSAFQSnALPTLSASGAR (N) ELPQAVCEILGLQGS(0.99)EVT(0.0)T(0.0)PDS(0.0)DVGEDEN(1.0)VVM(1.0)T(0.0)PCPT(0.0)S(0.0)AFQS(0.0)N(1.0)ALPT(0.0)LS(0.0)AS(0.0)GAR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated,m:Oxidized methionine TBC1D15 78306.6 13 7 1180.1 169.17 HUMAN 1 0.5215 10.8564 EILQRTQSAPNFTDM-p Q9BZF3;S290-p EILQRTQSAPNFTDM 0.484480989227411 0.0765488535616145 0.111666666666667 -0.214 5.7974476241155 14.8101825018039 0.111666666666667 -0.214 0.263181427121088 0.0330355658343644 1.2483952321002 -2.8411007510891 Q9BZF3 OSBPL6 Q9BZF3.S290.p_OSBPL6 Q9BZF3_S290s _1_1_290_290 Q9BZF3 Q9BZF3-5|Q9BZF3-3|Q9BZF3-2 Oxysterol-binding protein-related protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19520.19520.3 20.5 20.5 2.585 4 1 1 0 1008.1732 2942.5319 S290s TMT10 288 (R) TQsAPNFTDMQANCVDISKK (D) T(0.0)QS(0.99)APNFT(0.0)DMQANCVDIS(0.0)KK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S OSBPL6 107445.2 7 3 1916.1 107.26 HUMAN 1 5.7974 -14.8102 EILSDESSSDEDEKK-p P35659;S231-p EILSDESSSDEDEKK 0.579287608093284 0.885150204505266 0.113333333333333 0.0176666666666667 4.35966561769311 0.744878639876376 0.113333333333333 0.0176666666666667 0.366465789364768 0.842387930967296 0.985285425662424 0.208579973805014 P35659 DEK P35659.S231.p_DEK P35659_S231sS232s_2_2_231_232 P35659 P35659|B4DFG0|P35659-2 Protein DEK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16258.16258.3 7.29 7.29 1.144 5 2 2 0 972.7665 2756.3751 S231s S232s TMT10 220 (R) TKCPEILSDESssDEDEK (K) T(0.0)KCPEILS(0.0)DES(0.0)S(0.99)S(0.99)DEDEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DEK 42958.8 2 8 488.1 294.94 HUMAN 1 4.3597 0.7449 EILTSPCSPEIRVYT-p Q9BPX3;S844-p EILTSPCSPEIRVYT 0.318098337086169 0.756036718889476 0.145 0.0376666666666667 9.31407434010606 1.68019943186213 0.145 0.0376666666666667 0.117109618441185 0.679172443702564 1.862745391045 0.436706633101066 Q9BPX3 NCAPG Q9BPX3.S844.p_NCAPG Q9BPX3_S844s _1_1_844_844 Q9BPX3 Q9BPX3 Condensin complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20915.20915.3 13.19 10.57 1.149 3 1 1 0 700.0036 2018.0248 S844s TMT10 834 (K) ICNEILTSPCsPEIR (V) ICNEILT(0.0)S(0.0)PCS(0.99)PEIR C:Carbamidomethylation,s:Phosphorylated S NCAPG 115416.1 1 3 1123.1 174.85 HUMAN 1 9.3141 1.6802 EINAREESLVEELSP-p Q9BXK5;S420-p EINAREESLVEELSP 0.388754166810574 0.0350428011405033 -0.127333333333333 -0.337 7.59127562583512 19.5934190707394 -0.127333333333333 -0.337 0.17412953385551 0.0109814096545004 -1.56416639115807 -3.78877825366787 Q9BXK5 BCL2L13 Q9BXK5.S420.p_BCL2L13 Q9BXK5_S420s _1_1_420_420 Q9BXK5 A0A087WX97|Q9BXK5|A0A087WTL4|Q9BXK5-4 Bcl-2-like protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22695.22695.4 16.34 16.34 3.904 3 1 1 0 667.8426 2588.3819 S420s TMT10 413 (K) EINAREEsLVEELSPASEK (K) EINAREES(0.99)LVEELS(0.0)PAS(0.0)EK K:TMT10,s:Phosphorylated S BCL2L13 52836.3 5 5 810.1 221.13 HUMAN 1 -7.5913 -19.5934 EINARWNTLNKKVAQ-p H3BQK9;T5359-p EINARWNTLNKKVAQ 0.525819780346243 0.0420535466492068 -0.0846666666666667 -0.319666666666667 5.16373682586322 18.442859626395 -0.0846666666666667 -0.319666666666667 0.304527359912967 0.0143124518081158 -1.1339808182498 -3.54945623527722 H3BQK9 NotFound H3BQK9.T5359.p_NotFound H3BQK9_T5359t _1_1_5359_5359 H3BQK9 H3BQK9|H3BPE1|Q9UPN3|Q9UPN3-5|Q9UPN3-2 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13455.13455.3 7.28 7.28 99 1 1 1 0 557.659 1590.9935 T5359t TMT10 5357 (R) WNtLNKK (V) WNT(1.0)LNKK K:TMT10,t:Phosphorylated T MACF1 866539.7 1 8 472.1 301.95 HUMAN 1 -5.1637 -18.4429 EINGNWISASSINEA-p Q53EL6;S46-p EINGNWISASSINEA 0.126867028860092 0.150259865061758 0.335333333333333 0.162 18.5986748018611 10.8320735724857 0.335333333333333 0.162 0.0138080553677075 0.0825643645529067 3.58445524057997 2.1257737650664 Q53EL6 PDCD4 Q53EL6.S46.p_PDCD4 Q53EL6_S46s _1_1_46_46 Q53EL6 Q53EL6|Q53EL6-2 Programmed cell death protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19860.19860.3 12.74 12.74 2.713 3 1 1 0 728.6815 2104.0621 S46s TMT10 38 (K) NEINGNWIsASSINEAR (I) NEINGNWIS(0.99)AS(0.0)S(0.0)INEAR s:Phosphorylated S PDCD4 52133.7 1 2 476.1 301.17 HUMAN 1 18.5987 10.8321 EINIYAVTEEESDEE-p Q9ULR0-1;T218-p EINIYAVTEEESDEE 0.278066029924807 0.0243142668422904 -0.290666666666667 0.308333333333333 10.519202326762 21.9920534342672 -0.290666666666667 0.308333333333333 0.088731897187986 0.00632112904633227 -2.072075991676 4.31555093255557 Q9ULR0 ISY1 Q9ULR0.1.T218.p_ISY1 Q9ULR0-1_T218tS222s_2_2_218_222 Q9ULR0-1 Q9ULR0-1|Q9ULR0-2 Isoform 2 of Pre-mRNA-splicing factor ISY1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18654.18654.4 11.51 11.51 1.166 4 2 2 0 1066.9469 4103.8352 N213n T218t S222s Hydrogen 200 (R) GEKEEEEEEEEEInIYAVtEEEsDEEGSQEK (G) GEKEEEEEEEEEIN(1.0)IY(0.0)AVT(0.99)EEES(0.99)DEEGS(0.0)QEK K:TMT10-Lys-Only,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S ISY1 37794.1 1 2 4736.1 27.28 HUMAN 1 -10.5192 21.9921 EIPERTMSVSDFNYS-p Q96RT1-8;S1158-p EIPERTMSVSDFNYS 0.588620587928205 0.546580713341211 0.0873333333333333 -0.0826666666666667 4.23828739062483 3.52846385585539 0.0873333333333333 -0.0826666666666667 0.376852378739321 0.443765580613995 0.962413124155504 -0.825720864688473 Q96RT1 ERBB2IP Q96RT1.8.S1158.p_ERBB2IP Q96RT1-8_S1158s _1_1_1158_1158 Q96RT1-8 Q96RT1-8|Q96RT1-6|Q96RT1-7 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17107.17107.2 13.48 13.48 2.182 5 1 1 0 808.355 1535.7362 S1158s TMT10 1156 (R) TMsVSDFNYSR (T) T(0.0)MS(0.99)VS(0.0)DFNY(0.0)S(0.0)R s:Phosphorylated S ERBIN 159762.8 1 23 81.1 633.5 HUMAN 1 4.2383 -3.5285 EIPKCSNSPGPLGKS-p Q5VWT5;S93-p EIPKCSNSPGPLGKS 0.426782308408628 0.296555986294923 0.212666666666667 -0.219666666666667 6.81137423314941 6.96974601713145 0.212666666666667 -0.219666666666667 0.20838313943354 0.200921031124114 1.42795317265592 -1.45531603869632 Q5VWT5 C1orf168 Q5VWT5.S93.p_C1orf168 Q5VWT5_S93s _1_1_93_93 Q5VWT5 Q5VWT5 FYN-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11031.11031.3 10.53 10.53 2.394 2 1 1 0 518.9302 1474.8088 S93s TMT10 90 (K) CSNsPGPLGK (S) CS(0.0)NS(0.99)PGPLGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FYB2 82753.2 1 1 3578.1 47.86 HUMAN 1 6.8114 -6.9697 EIPKETLSPPGNGCA-p Q6W2J9;S488-p EIPKETLSPPGNGCA 0.691847298094592 0.14504070594466 0.0706666666666667 -0.149333333333333 3.00005840833182 11.0443471867934 0.0706666666666667 -0.149333333333333 0.501180493197768 0.0786258369318381 0.720424162030592 -2.16290076323645 Q6W2J9 BCOR Q6W2J9.S488.p_BCOR Q6W2J9_S488s _1_1_488_488 Q6W2J9 Q6W2J9|Q6W2J9-2|Q6W2J9-4|Q6W2J9-3 BCL-6 corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24377.24377.3 12.84 12.84 2.227 6 1 1 0 1123.5879 3288.7662 S488s TMT10 471 (R) AGSGLVLSGSEIPKETLsPPGNGCAIYR (S) AGS(0.0)GLVLS(0.0)GS(0.0)EIPKET(0.0)LS(0.99)PPGNGCAIY(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BCOR 193725.6 3 5 459.1 305.76 HUMAN 1 3.0001 -11.0443 EIPSATQSPISKKRK-p Q9BQG0-2;S1163-p EIPSATQSPISKKRK 0.96960967350522 0.00117984223282173 0.00666666666666666 -1.596 0.262782368605646 48.4016473642177 0.00666666666666666 -1.596 0.941286354979893 1.44489159104251e-05 0.077137130852591 -14.6421436298223 Q9BQG0 MYBBP1A Q9BQG0.2.S1163.p_MYBBP1A Q9BQG0-2_S1163s _1_1_1163_1163 Q9BQG0-2 Q9BQG0-2 Isoform 2 of Myb-binding protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14574.14574.2 15.95 9.83 2.704 4 1 1 0 898.4837 1715.9944 S1163s TMT10 1156 (K) EIPSATQsPISK (K) EIPS(0.0)AT(0.0)QS(0.99)PIS(0.0)K K:TMT10,s:Phosphorylated S MYBBP1A 150334.3 5 4 297.1 378.74 HUMAN 1 0.2628 -48.4016 EIPTHSFSPEAAYAK-p Q86UB9;S198-p EIPTHSFSPEAAYAK 0.936107507392066 0.0764273734992379 0.0173333333333333 0.216 0.561395447070607 14.8191745609517 0.0173333333333333 0.216 0.878740120346013 0.0329672365191893 0.159925445777769 2.84277784999046 Q86UB9 TMEM135 Q86UB9.S198.p_TMEM135 Q86UB9_S198s _1_1_198_198 Q86UB9 Q86UB9|Q86UB9-2|E9PQL0 Transmembrane protein 135 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22985.22985.4 21.71 21.71 1.241 4 1 1 0 772.9149 3008.67 S198s TMT10 185 (R) FIVGKEEIPTHSFsPEAAYAK (V) FIVGKEEIPT(0.0)HS(0.0)FS(0.99)PEAAY(0.0)AK K:TMT10,s:Phosphorylated S TMEM135 53088.4 1 1 5215.1 21.71 HUMAN 1 0.5614 14.8192 EIPVQEKTPKKRLPE-p Q96B01;T66-p EIPVQEKTPKKRLPE 0.211309876563391 0.00159168462790637 -0.320666666666667 -1.515 13.0326656664188 44.7904094955885 -0.320666666666667 -1.515 0.04974316714908 3.31863164751379e-05 -2.51695477048271 -12.5110945815061 Q96B01 RAD51AP1 Q96B01.T66.p_RAD51AP1 Q96B01_T66t _1_1_66_66 Q96B01 Q96B01|Q96B01-2|Q96B01-3|F5H1Y0|F5H710|F5H031|F5H4V6 RAD51-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11540.11540.4 10.49 10.49 99 1 1 1 0 606.3583 2342.4465 T66t TMT10 57 (R) KEEIPVQEKtPK (K) KEEIPVQEKT(1.0)PK K:TMT10,t:Phosphorylated T RAD51AP1 38684.9 2 2 1345.1 151.31 HUMAN 1 -13.0327 -44.7904 EIQELKASPKIFQKT-p Q9H270;S813-p EIQELKASPKIFQKT 0.475458015679981 0.727423869700124 0.119666666666667 0.0383333333333334 5.94504320392835 1.90262812532979 0.119666666666667 0.0383333333333334 0.254387448635702 0.645263630723631 1.27476729019689 0.487073153698731 Q9H270 VPS11 Q9H270.S813.p_VPS11 Q9H270_S813s _1_1_813_813 Q9H270 Q9H270|A0A087WXL6|B7Z879 Vacuolar protein sorting-associated protein 11 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16869.16869.4 11.4 11.4 99 1 1 1 0 577.5908 2227.3741 S813s TMT10 803 (R) IRQEIQELKAsPK (I) IRQEIQELKAS(1.0)PK K:TMT10,s:Phosphorylated S VPS11 109147 4 5 2679.1 74.23 HUMAN 1 5.945 1.9026 EIQTPENTPRLFDLV-p Q9NTJ3;T690-p EIQTPENTPRLFDLV 0.691409159033215 0.0244414732279611 0.103 -0.578666666666667 3.00443539446673 21.9499458748052 0.103 -0.578666666666667 0.500675638748742 0.00638271440781789 0.721313033233921 -4.30595252748631 Q9NTJ3 SMC4 Q9NTJ3.T690.p_SMC4 Q9NTJ3_T690t _1_1_690_690 Q9NTJ3 Q9NTJ3|E9PD53|Q9NTJ3-2 Structural maintenance of chromosomes protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6674.6674.4 8.19 4.32 5.241 3 1 1 0 611.067 2361.2685 T690t Hydrogen 681 (K) MTEIQTPENtPRLFDLVK (V) MT(0.0)EIQT(0.0)PENT(0.99)PRLFDLVK K:TMT10-Lys-Only,t:Phosphorylated T SMC4 147864 2 5 902.1 203.59 HUMAN 1 3.0044 -21.9499 EIQTRSASPSNIKAQ-p Q9NRH2;S351-p EIQTRSASPSNIKAQ 0.510454508183718 0.165482179146696 0.105333333333333 -0.25 5.39677333396836 10.2739303145092 0.105333333333333 -0.25 0.288617504044622 0.0938873256609473 1.17629751561612 -2.02849852412466 Q9NRH2 SNRK Q9NRH2.S351.p_SNRK Q9NRH2_S351s _1_1_351_351 Q9NRH2 Q9NRH2|E7EUC4 SNF-related serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8591.8591.2 12.32 7.65 1.38 3 1 1 0 671.363 1261.7516 S351s TMT10 349 (R) SAsPSNIK (A) S(0.0)AS(0.99)PS(0.0)NIK K:TMT10,s:Phosphorylated S SNRK 85187.6 3 1 3054.1 62.03 HUMAN 1 5.3968 -10.2739 EIRQKNLSLARRALG-p Q9BZJ0;S590-p EIRQKNLSLARRALG 0.117448233921663 0.294941548248958 -0.378666666666667 0.128333333333333 19.3473157439898 7.00092928082157 -0.378666666666667 0.128333333333333 0.0116216669551313 0.199483542475428 -3.7402562525528 1.46077224640062 Q9BZJ0 CRNKL1 Q9BZJ0.S590.p_CRNKL1 Q9BZJ0_S590s _1_1_590_590 Q9BZJ0 Q9BZJ0|Q9BZJ0-3|Q5JY65|Q9BZJ0-2 Crooked neck-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8440.8440.3 7.18 3.53 99 1 1 1 0 380.2149 1058.6632 S590s TMT10 588 (K) NLsLARR (A) NLS(1.0)LARR s:Phosphorylated S CRNKL1 100963.5 1 1 4807.1 26.36 HUMAN 1 -19.3473 7.0009 EIRSPAGSPELRKPS-p Q96JM3;S436-p EIRSPAGSPELRKPS 0.557409008328205 0.0831503102200002 -0.08 0.207666666666667 4.6860047590106 14.2998887046687 -0.08 0.207666666666667 0.339937850618266 0.0371544750439944 -1.04618932719281 2.74645620537285 Q96JM3 CHAMP1 Q96JM3.S436.p_CHAMP1 Q96JM3_S436s _1_1_436_436 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7792.7792.2 9.86 6.74 3.483 2 1 1 0 611.8056 1142.6367 S436s TMT10 432 (R) SPAGsPELR (K) S(0.0)PAGS(0.99)PELR s:Phosphorylated S CHAMP1 90067.4 2 23 25.1 950.05 HUMAN 1 -4.686 14.2999 EIRSRHSSYPAGTED-p Q92934;S75-p EIRSRHSSYPAGTED 0.538254677344084 0.0098747260827239 0.0976666666666667 -0.506333333333333 4.97279663844557 28.2178131294568 0.0976666666666667 -0.506333333333333 0.31821477184264 0.00150736590251077 1.09907056698296 -5.89906241091267 Q92934 BAD Q92934.S75.p_BAD Q92934_S75s _1_1_75_75 Q92934 Q92934 Bcl2-associated agonist of cell death HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14103.14103.3 15.05 15.05 1.115 5 1 1 0 902.0419 2624.1408 S75s TMT10 73 (R) HSsYPAGTEDDEGMGEEPSPFR (G) HS(0.0)S(0.99)Y(0.0)PAGT(0.0)EDDEGMGEEPS(0.0)PFR s:Phosphorylated S BAD 18391.6 4 2 1955.1 105.21 HUMAN 1 4.9728 -28.2178 EIRVDAASPGPRVTF-p Q2LD37;S3653-p EIRVDAASPGPRVTF 0.274349481664046 0.0592682657167451 -0.165666666666667 -0.351333333333333 10.6300762690763 16.3497047002905 -0.165666666666667 -0.351333333333333 0.0864952728685165 0.023175522272027 -2.09142109883508 -3.13335426659477 Q2LD37 KIAA1109 Q2LD37.S3653.p_KIAA1109 Q2LD37_S3653s _1_1_3653_3653 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7|Q2LD37-6 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19393.19393.4 8.31 8.31 4.308 2 1 1 0 608.5569 2351.2404 S3653s TMT10 3638 (R) VGETEELPEIRVDAAsPGPR (V) VGET(0.0)EELPEIRVDAAS(0.99)PGPR s:Phosphorylated S KIAA1109 559693.9 2 21 143.1 520.8 HUMAN 1 -10.6301 -16.3497 EISEPVITPSQRQQK-p Q9NXX6;T375-p EISEPVITPSQRQQK 0.627581962637461 0.154433079346694 0.083 -0.263 3.76050880793723 10.6677442987262 0.083 -0.263 0.420677340051884 0.0857483101520494 0.87106459258655 -2.09708498951274 Q9NXX6 NSMCE4A Q9NXX6.T375.p_NSMCE4A Q9NXX6_T375t _1_1_375_375 Q9NXX6 Q9NXX6 Non-structural maintenance of chromosomes element 4 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21481.21481.3 14.68 14.68 1.7 4 1 1 0 638.327 1832.9955 T375t TMT10 366 (K) TFEISEPVItPSQR (Q) T(0.0)FEIS(0.0)EPVIT(0.99)PS(0.0)QR t:Phosphorylated T NSMCE4A 44414.7 2 3 3661.1 45.81 HUMAN 1 3.7605 -10.6677 EISKELLSPGVKNKN-p Q14694;S718-p EISKELLSPGVKNKN 0.122604861632727 0.402172048084606 -0.349333333333333 -0.137 18.9730550422982 5.26221109542509 -0.349333333333333 -0.137 0.0126676045037475 0.297700038257143 -3.66194060124431 -1.15165661542173 Q14694 USP10 Q14694.S718.p_USP10 Q14694_S718s _1_1_718_718 Q14694 Q14694-2|Q14694-3 Ubiquitin carboxyl-terminal hydrolase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18399.18399.3 9.3 7.57 99 1 1 1 0 460.9347 1300.8241 S718s TMT10 715 (K) ELLsPGVK (N) ELLS(1.0)PGVK K:TMT10,s:Phosphorylated S USP10 87759.8 1 15 358.1 346.34 HUMAN 1 -18.9731 -5.2622 EISLKNLSSDEATNP-p Q7Z417;S112-p EISLKNLSSDEATNP 0.150283451076775 0.313078317949065 -0.263 -0.192 16.5789913647294 6.66678506311218 -0.263 -0.192 0.0219837037810479 0.215437595708843 -3.18016731809107 -1.40218105559527 Q7Z417 NUFIP2 Q7Z417.S112.p_NUFIP2 Q7Z417_S112s _1_1_112_112 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12004.12004.2 11.63 5.56 1.11 4 1 1 0 856.9061 1632.839 S112s TMT10 110 (K) NLsSDEATNPISR (V) NLS(0.99)S(0.0)DEAT(0.0)NPIS(0.0)R s:Phosphorylated S NUFIP2 76176.8 2 2 304.1 375.48 HUMAN 1 -16.579 -6.6668 EISRSSPSPALEQPF-p Q9UMZ2;S1087-p EISRSSPSPALEQPF 0.048419304614536 0.00365042513007267 -0.518333333333333 -0.69 29.1070392493646 36.2001012188432 -0.518333333333333 -0.69 0.0012282763084603 0.000239877701127169 -6.16497238443468 -8.54668422357691 Q9UMZ2 SYNRG Q9UMZ2.S1087.p_SYNRG Q9UMZ2_S1087s _1_1_1087_1087 Q9UMZ2 Q9UMZ2|Q9UMZ2-5|Q9UMZ2-7|Q9UMZ2-3|Q9UMZ2-8|Q9UMZ2-4 Synergin gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12695.12695.3 14.08 14.08 1.398 3 1 1 0 632.6455 1815.9551 S1087s TMT10 1084 (R) SSPsPALEQPFRDR (S) S(0.0)S(0.0)PS(0.99)PALEQPFRDR s:Phosphorylated S SYNRG 141393.5 2 17 236.1 418.49 HUMAN 1 -29.107 -36.2001 EITALAPSTMKIKII-p P63261;S323-p EITALAPSTMKIKII 0.549106119289446 0.722781338335449 0.082 -0.041 4.80605077918046 1.9412465272101 0.082 -0.041 0.330670096469577 0.63955124290184 1.06839303622613 -0.495694052545166 P63261 ACTG1 P63261.S323.p_ACTG1 P63261_S323s _1_1_323_323 P63261 P68133|P62736|P68032|P63267|P60709|P63261|P63267-2|A6NL76 Actin, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21538.21538.2 13.23 7.76 1.227 3 1 1 0 850.4576 1619.9443 S323s TMT10 316 (K) EITALAPsTMK (I) EIT(0.0)ALAPS(0.99)T(0.0)MK K:TMT10,s:Phosphorylated S ACTG1 42134.4 10 18 1233.1 163.71 HUMAN 1 4.8061 -1.9412 EITTSSPSPINSSQA-p P49790-3;S531-p EITTSSPSPINSSQA 0.265553122834036 0.236785877682804 0.234 0.142333333333333 10.9157014045824 8.24107943968448 0.234 0.142333333333333 0.0809897129188746 0.149931213489694 2.14134737063946 1.67640926931174 P49790 NUP153 P49790.3.S531.p_NUP153 P49790-3_S531s _1_1_531_531 P49790-3 P49790-3 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.36419.36419.4 26.62 26.62 1.345 16 1 1 0 1098.0718 4309.2855 S531s TMT10 506 (K) ISLPITSSSLPTFNFSSPEITTSSPsPINSSQALTNK (V) IS(0.0)LPIT(0.0)S(0.0)S(0.0)S(0.0)LPT(0.0)FNFS(0.0)S(0.0)PEIT(0.0)T(0.0)S(0.0)S(0.0)PS(0.99)PINS(0.0)S(0.0)QALT(0.0)NK K:TMT10,s:Phosphorylated S NUP153 158989.2 2 21 64.1 696.53 HUMAN 1 10.9157 8.2411 EITVTPPTPTLLSPK-p Q9Y6J0;T2154-p EITVTPPTPTLLSPK 0.390532605380697 0.870006215796507 -0.184666666666667 0.024 7.5459634101427 0.852457530717526 -0.184666666666667 0.024 0.175955829173532 0.821777501288449 -1.55628261733195 0.236425315504197 Q9Y6J0 CABIN1 Q9Y6J0.T2154.p_CABIN1 Q9Y6J0_T2154t _1_1_2154_2154 Q9Y6J0 Q9Y6J0|A0A087WWW8|Q9Y6J0-2|B5MEB3 Calcineurin-binding protein cabin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.34827.34827.4 20.77 20.77 1.112 7 1 1 0 896.5265 3503.1107 T2154t TMT10 2135 (K) LVIPSAATKFPPEITVTPPtPTLLSPK (G) LVIPS(0.0)AAT(0.0)KFPPEIT(0.0)VT(0.0)PPT(0.99)PT(0.0)LLS(0.0)PK K:TMT10,t:Phosphorylated T CABIN1 248858 3 12 763.1 229.21 HUMAN 1 -7.546 0.8525 EIVEDKKSGRSSDIT-p Q5T8D3-3;S155-p EIVEDKKSGRSSDIT 0.204999288188342 0.0135738816995139 -0.195 -0.411666666666667 13.3136793489418 25.94915644386 -0.195 -0.411666666666667 0.0466264193257938 0.00254146630180669 -2.56774690123788 -5.28133553503646 Q5T8D3 ACBD5 Q5T8D3.3.S155.p_ACBD5 Q5T8D3-3_S155s _1_1_155_155 Q5T8D3-3 Q5T8D3|Q5T8D3-3|B7Z2R7|Q5T8D3-2 Isoform 3 of Acyl-CoA-binding domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26225.26225.4 16.56 16.56 9.394 2 1 1 0 651.8654 2524.4742 S155s TMT10 142 (R) VIGPFYEIVEDKKsGR (S) VIGPFY(0.0)EIVEDKKS(0.99)GR K:TMT10,s:Phosphorylated S ACBD5 59375.9 3 1 760.1 230.2 HUMAN 1 -13.3137 -25.9492 EIVSEAESHVSGISR-p Q5QJE6;S145-p EIVSEAESHVSGISR 0.733693204325823 0.440504785465389 0.0508333333333333 0.0728333333333334 2.54512573852949 4.74288292030762 0.0508333333333333 0.0728333333333334 0.556528521207366 0.33551481988527 0.626404734671468 1.05651790709911 Q5QJE6 DNTTIP2 Q5QJE6.S145.p_DNTTIP2 Q5QJE6_S141sS145s_2_2_141_145 Q5QJE6 Q5QJE6|J3KP30 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28019.28019.3 11.42 11.42 2.811 7 2 2 0 866.708 2438.1884 S141s S145s TMT10 133 (K) ESYTEEIVsEAEsHVSGISR (I) ES(0.0)Y(0.0)T(0.0)EEIVS(0.99)EAES(0.99)HVS(0.0)GIS(0.0)R s:Phosphorylated S DNTTIP2 84866.9 5 19 448.1 309.47 HUMAN 2 2.5451 4.7429 EIWRELFSPLHALNF-p P68402;S64-p EIWRELFSPLHALNF 0.576683296043079 0.411919674391271 0.133 -0.088 4.39869373126811 5.12439769804629 0.133 -0.088 0.363187277627764 0.307298351289605 0.99261348373824 -1.12657399337355 P68402 PAFAH1B2 P68402.S64.p_PAFAH1B2 P68402_S64s _1_1_64_64 P68402 P68402|P68402-4|P68402-2|P68402-3 Platelet-activating factor acetylhydrolase IB subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32066.32066.3 14.54 14.54 14.54 3 1 1 0 785.3966 2274.208 S64s TMT10 61 (R) ELFsPLHALNFGIGGDTTR (H) ELFS(0.99)PLHALNFGIGGDT(0.0)T(0.0)R s:Phosphorylated S PAFAH1B2 25740 3 2 3270.1 55.36 HUMAN 1 4.3987 -5.1244 EIYGERLYETSYRLS-p Q9UKN8;Y217-p EIYGERLYETSYRLS 0.286866398353762 0.576954022473259 0.257 0.115333333333333 10.230085414104 3.22118498529772 0.257 0.115333333333333 0.0948399810630867 0.476301008939283 2.02171403458897 0.764878330618176 Q9UKN8 GTF3C4 Q9UKN8.Y217.p_GTF3C4 Q9UKN8_Y217y _1_1_217_217 Q9UKN8 Q9UKN8 General transcription factor 3C polypeptide 4 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12394.12394.2 9.01 0.67 1.209 4 1 1 0 620.7953 1160.6149 Y217y TMT10 216 (R) LyETSYR (L) LY(0.99)ET(0.0)S(0.0)Y(0.0)R y:Phosphorylated Y GTF3C4 93292.9 1 1 370.1 9.01 HUMAN 1 10.2301 3.2212 EIYQKILSPDSFIKD-p Q8IZT6;S367-p EIYQKILSPDSFIKD 0.125743941781331 0.00176472384256938 -0.352666666666667 -0.846 18.7124823164457 43.5645730504628 -0.352666666666667 -0.846 0.0134509131442068 4.40091210532343e-05 -3.60792088912994 -11.8569919473235 Q8IZT6 ASPM Q8IZT6.S367.p_ASPM Q8IZT6_S367s _1_1_367_367 Q8IZT6 Q8IZT6|Q8IZT6-2 Abnormal spindle-like microcephaly-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29855.29855.2 11.76 7.23 1.888 2 1 1 0 779.4382 1477.903 S367s TMT10 365 (K) ILsPDSFIK (D) ILS(0.99)PDS(0.0)FIK K:TMT10,s:Phosphorylated S ASPM 413444.1 4 3 949.1 196.42 HUMAN 1 -18.7125 -43.5646 EIYRYSRSLEELLLD-p A0A0G2JPP5;S37-p EIYRYSRSLEELLLD 0.175126391202982 0.0188162592004335 0.237 0.374 15.0619753674832 23.7413046942291 0.237 0.374 0.0311747129480008 0.0042254165652145 2.89008280692076 4.72637460978429 A0A0G2JPP5 SCRIB A0A0G2JPP5.S37.p_SCRIB A0A0G2JPP5_S37s _1_1_37_37 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q9BTT6|Q9BTT6-2 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33443.33443.3 19.06 14.72 99 1 1 1 0 608.3219 1742.985 S37s TMT10 37 (R) sLEELLLDANQLR (E) S(1.0)LEELLLDANQLR s:Phosphorylated S SCRIB 178690.9 4 7 22.1 1004.81 HUMAN 1 15.062 23.7413 EIYSQIQSKKKILAT-p P29401-2;S288-p EIYSQIQSKKKILAT 0.978025667679098 0.0309281033047548 -0.00633333333333335 0.301666666666667 0.190734316997804 20.4041049778771 -0.00633333333333334 0.301666666666667 0.957032239983 0.00911149208432973 -0.056419619333265 3.9624135811294 P29401 TKT P29401.2.S288.p_TKT P29401-2_S288s _1_1_288_288 P29401-2 P29401-2 Isoform 2 of Transketolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.37049.37049.3 22.88 21.71 2.165 3 1 1 0 854.4414 2481.3423 S288s TMT10 273 (K) NMAEQIIQEIYSQIQsK (K) NMAEQIIQEIY(0.0)S(0.0)QIQS(0.99)K K:TMT10,s:Phosphorylated S TKT 69497 1 5 1447.1 140.91 HUMAN 1 -0.1907 20.4041 EKAAKEDSQPGEQND-p Q9NUA8;S703-p EKAAKEDSQPGEQND 0.815882402475188 0.00107456139719538 0.0556666666666667 1.09466666666667 1.69589682503597 50.1790388234276 0.0556666666666667 1.09466666666667 0.67672203431 9.59612988684067e-06 0.440350973455846 15.814242446943 Q9NUA8 ZBTB40 Q9NUA8.S703.p_ZBTB40 Q9NUA8_S703s _1_1_703_703 Q9NUA8 Q9NUA8|F8WAI8 Zinc finger and BTB domain-containing protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10094.10094.4 24.26 20.51 9.878 3 1 1 0 874.6775 3415.718 S703s TMT10 698 (K) AAKEDsQPGEQNDQGETGSLPGQQEK (E) AAKEDS(0.99)QPGEQNDQGET(0.0)GS(0.0)LPGQQEK K:TMT10,s:Phosphorylated S ZBTB40 140797.4 2 4 1500.1 135.98 HUMAN 1 1.6959 50.179 EKAEMKRSTELVLSP-p Q8TDY2;S237-p EKAEMKRSTELVLSP 0.397840397989355 0.178801608725192 -0.119666666666667 0.179333333333333 7.38786168677025 9.83198958125658 -0.118072748946789 0.179333333333333 0.182479394550631 0.103944386877615 -1.52874997489004 1.95176117908765 Q8TDY2 RB1CC1 Q8TDY2.S237.p_RB1CC1 Q8TDY2_S237s _1_1_237_237 Q8TDY2 Q8TDY2|Q8TDY2-2 RB1-inducible coiled-coil protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21417.21417.2 16.42 9.91 2.165 3 1 1 0 827.4111 1573.8457 S237s TMT10 237 (R) sTELVLSPDMPR (T) S(0.99)T(0.0)ELVLS(0.0)PDMPR s:Phosphorylated S RB1CC1 185198.6 5 3 707.1 238.96 HUMAN 1 -7.3879 9.832 EKAEVYGSENESERN-p Q9BVS4;S350-p EKAEVYGSENESERN 0.154818261892026 0.100757424946358 -0.595666666666667 0.231333333333333 16.272493879317 13.1676079734158 -0.595666666666667 0.231333333333333 0.0235912314850449 0.0482213320106172 -3.12068834103705 2.5398982253124 Q9BVS4 RIOK2 Q9BVS4.S350.p_RIOK2 Q9BVS4_S350s _1_1_350_350 Q9BVS4 Q9BVS4|Q9BVS4-2 Serine/threonine-protein kinase RIO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12543.12543.3 17.08 17.08 3.482 5 1 1 0 1079.4325 3156.3142 S350s TMT10 345 (K) AEVYGsENESERNCLEESEGCYCR (S) AEVY(0.0)GS(0.99)ENES(0.0)ERNCLEES(0.0)EGCY(0.0)CR C:Carbamidomethylation,s:Phosphorylated S RIOK2 63738.3 1 2 1652.1 123.35 HUMAN 1 -16.2725 13.1676 EKAIRGFSPPHRICS-p P16298-4;S472-p EKAIRGFSPPHRICS 0.271101764369523 0.0435420642721022 -0.188 -0.319 10.74220708061 18.2337694049017 -0.188 -0.319 0.084290628469086 0.0150183789873562 -2.11100502202206 -3.50681308286497 P16298 PPP3CB P16298.4.S472.p_PPP3CB P16298-4_S472s _1_1_472_472 P16298-4 P16298-4|P16298-3 Isoform 4 of Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7321.7321.2 7.99 6.9 99 1 1 1 0 553.7714 1026.5682 S472s TMT10 470 (R) GFsPPHR (I) GFS(1.0)PPHR s:Phosphorylated S PPP3CB 59807 2 1 3004.2 63.48 HUMAN 1 -10.7422 -18.2338 EKALDIDSDEESEPK-p Q96DR7;S392-p EKALDIDSDEESEPK 0.953576544254707 0.0157273663070388 -0.0103333333333333 -0.348333333333333 0.405503711876517 24.9282133719868 -0.0103333333333334 -0.348333333333333 0.910855801489221 0.00321498286654354 -0.117296590333886 -5.01937699860635 Q96DR7 ARHGEF26 Q96DR7.S392.p_ARHGEF26 Q96DR7_S392s _1_1_392_392 Q96DR7 Q96DR7|Q96DR7-4|Q96DR7-3 Rho guanine nucleotide exchange factor 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13434.13434.5 16.01 16.01 4.42 3 1 1 0 658.537 3208.6879 S392s TMT10 387 (K) ALDIDsDEESEPKEQKSDEK (I) ALDIDS(0.99)DEES(0.0)EPKEQKS(0.0)DEK K:TMT10,s:Phosphorylated S ARHGEF26 97914.4 4 12 478.1 300.31 HUMAN 1 -0.4055 -24.9282 EKALETDSVSGVSKQ-p Q15022;S726-p EKALETDSVSGVSKQ 0.260386657049657 0.55962713215966 0.181 0.0606666666666667 11.0779473093347 3.39783911946529 0.181 0.0606666666666667 0.0780198783949144 0.457315675520707 2.16977069792614 0.800000612802827 Q15022 SUZ12 Q15022.S726.p_SUZ12 Q15022_S726s _1_1_726_726 Q15022 Q15022|J3QQW9 Polycomb protein SUZ12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13880.13880.2 15.22 15.22 2.338 4 1 1 0 865.9538 1650.9314 S726s TMT10 721 (K) ALETDsVSGVSK (Q) ALET(0.0)DS(0.99)VS(0.0)GVS(0.0)K K:TMT10,s:Phosphorylated S SUZ12 83795 2 6 1074.1 180.59 HUMAN 1 11.0779 3.3978 EKANASNSPSSLRLL-p Q5T5X7;S164-p EKANASNSPSSLRLL 0.732621990036657 0.900469239154559 -0.058 -0.0186666666666667 2.56177872878092 0.637277960693109 -0.058 -0.0186666666666667 0.554398602837489 0.863519608716073 -0.629907113481016 -0.180226163486937 Q5T5X7 BEND3 Q5T5X7.S164.p_BEND3 Q5T5X7_S164s _1_1_164_164 Q5T5X7 Q5T5X7 BEN domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5699.5699.3 13.46 13.46 2.87 4 1 1 0 471.5634 1332.7069 S164s TMT10 159 (K) ANASNsPSSLR (L) ANAS(0.0)NS(0.99)PS(0.0)S(0.0)LR s:Phosphorylated S BEND3 95614 2 3 2481.1 81.71 HUMAN 1 -2.5618 -0.6373 EKAQPSSSEDELDNV-p Q5T5U3;S1432-p EKAQPSSSEDELDNV 0.352645276788012 0.675540445549461 0.177833333333333 -0.047 8.40676355692932 2.32791392243171 0.177833333333333 -0.047 0.144319044318537 0.585071047997413 1.70566035470948 -0.580184128523656 Q5T5U3 ARHGAP21 Q5T5U3.S1432.p_ARHGAP21 Q5T5U3_S1431sS1432s_2_2_1431_1432 Q5T5U3 Q5T5U3|A0A087WW76 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27399.27399.4 14.81 14.81 1.148 3 2 2 0 697.8411 2628.4124 S1431s S1432s TMT10 1427 (K) AQPSssEDELDNVFFKK (E) AQPS(0.0)S(0.99)S(0.99)EDELDNVFFKK K:TMT10,s:Phosphorylated S ARHGAP21 218696.3 5 29 148.1 512.52 HUMAN 2 8.4068 -2.3279 EKASPPASPPIAFPP-p Q8NEZ4-3;S4361-p EKASPPASPPIAFPP 0.564658894212854 0.0134399239574354 -0.105666666666667 0.501333333333333 4.57452796336353 26.0222572146857 -0.105666666666667 0.501333333333333 0.34877649074965 0.00249904616262939 -1.02547707644705 5.30045913826005 Q8NEZ4 KMT2C Q8NEZ4.3.S4361.p_KMT2C Q8NEZ4-3_S4357sS4361s_2_2_4357_4361 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32267.32267.5 15.12 15.12 99 2 2 2 0 745.3902 3562.9764 S4357s S4361s TMT10 4356 (K) AsPPAsPPIAFPPAFEAAQVEAKPDELK (V) AS(1.0)PPAS(1.0)PPIAFPPAFEAAQVEAKPDELK K:TMT10,s:Phosphorylated S KMT2C 554869.1 2 28 88.1 626.31 HUMAN 1 -4.5745 26.0223 EKAVDSSSEEIEVEV-p Q9Y6X4;S637-p EKAVDSSSEEIEVEV 0.34762033464647 0.122482929315117 -0.169333333333333 0.185666666666667 8.52594707967859 12.0275502152761 -0.169333333333333 0.185666666666667 0.140412344855793 0.0626967427098896 -1.72629940712991 2.33605342523666 Q9Y6X4 FAM169A Q9Y6X4.S637.p_FAM169A Q9Y6X4_S635sS636sS637s_3_3_635_637 Q9Y6X4 Q9Y6X4|D6RB01 Soluble lamin-associated protein of 75 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23507.23507.3 12.47 12.47 99 3 3 3 0 862.0425 2344.2194 S635s S636s S637s TMT10 632 (K) AVDsssEEIEVEVPVVDRR (N) AVDS(1.0)S(1.0)S(1.0)EEIEVEVPVVDRR s:Phosphorylated S FAM169A 75295.8 2 19 731.1 236 HUMAN 1 -8.5259 12.0276 EKCALQNSPRSQKQQ-p A0A0C4DFM7;S209-p EKCALQNSPRSQKQQ 0.251592373173704 0.117357613683989 0.169333333333333 -0.189666666666667 11.4332539625512 12.2664814937562 0.169333333333333 -0.189666666666667 0.0718910130902058 0.0593405887161541 2.23219363196774 -2.37847419907946 A0A0C4DFM7 ZCCHC11 A0A0C4DFM7.S209.p_ZCCHC11 A0A0C4DFM7_S209s _1_1_209_209 A0A0C4DFM7 A0A0C4DFM7|Q5TAX3|Q5TAX3-2|E9PRG2|X6R5G7 Terminal uridylyltransferase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5250.5250.2 12.39 6.22 99 1 1 1 0 627.7968 1174.62 S209s TMT10 204 (K) CALQNsPR (S) CALQNS(1.0)PR C:Carbamidomethylation,s:Phosphorylated S ZCCHC11 188216.3 4 6 850.1 212.61 HUMAN 1 11.4333 -12.2665 EKCKSTLSPPEASPG-p Q6NUJ5;S186-p EKCKSTLSPPEASPG 0.595851611109755 0.891575033019321 0.104666666666667 -0.0146666666666666 4.14928010254298 0.699654541768677 0.104666666666667 -0.0146666666666666 0.384655538230557 0.851205744412844 0.945559212594977 -0.196726068446862 Q6NUJ5 PWWP2B Q6NUJ5.S186.p_PWWP2B Q6NUJ5_S186s _1_1_186_186 Q6NUJ5 Q6NUJ5|Q6NUJ5-2 PWWP domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13731.13731.2 15.67 9.34 2.657 4 1 1 0 970.9852 1861.0017 S186s TMT10 183 (K) STLsPPEASPGPPAAPR (A) S(0.0)T(0.0)LS(0.99)PPEAS(0.0)PGPPAAPR s:Phosphorylated S PWWP2B 64650.6 4 2 2283.1 89.78 HUMAN 1 4.1493 -0.6997 EKCSDSQSWEDIAPE-p Q12888-2;S791-p EKCSDSQSWEDIAPE 0.608202691544958 0.938174132440418 0.0686666666666667 0.00833333333333338 3.99848088071601 0.393106304185971 0.0686666666666667 0.00833333333333338 0.398246448874801 0.913459653026593 0.916839220320753 0.113842062651751 Q12888 TP53BP1 Q12888.2.S791.p_TP53BP1 Q12888-2_S791s _1_1_791_791 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21412.21412.4 13.84 13.84 1.113 4 1 1 0 1026.7394 4023.9519 S791s TMT10 786 (K) CSDSQsWEDIAPEIEPCAENRLDTKEEK (S) CS(0.0)DS(0.0)QS(0.99)WEDIAPEIEPCAENRLDT(0.0)KEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TP53BP1 216167.2 1 35 3.1 2297.07 HUMAN 1 3.9985 0.3931 EKDFAPLTPNIVRAL-p Q08AM6;T11-p EKDFAPLTPNIVRAL 0.830680447880338 0.0274605623760349 -0.0336666666666667 -0.292333333333333 1.55016694421229 21.1737985561205 -0.0336666666666667 -0.292333333333333 0.699815094365235 0.00763167986795792 -0.406706467796397 -4.13135311446823 Q08AM6 VAC14 Q08AM6.T11.p_VAC14 Q08AM6_T11t _1_1_11_11 Q08AM6 Q08AM6|H3BUU8|H3BN23 Protein VAC14 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23397.23397.3 14.9 14.9 99 1 1 1 0 517.9422 1471.847 T11t TMT10 6 (K) DFAPLtPNIVR (A) DFAPLT(1.0)PNIVR t:Phosphorylated T VAC14 88998 2 1 3902.1 41.03 HUMAN 1 -1.5502 -21.1738 EKDILEQSLDEARGS-p Q9BXL6;S290-p EKDILEQSLDEARGS 0.190190058935746 0.192112500063213 -0.33 -0.138333333333333 14.1049491114632 9.41925841971826 -0.33 -0.138333333333333 0.0388602051379492 0.114307350383693 -2.71220773785871 -1.880255748801 Q9BXL6 CARD14 Q9BXL6.S290.p_CARD14 Q9BXL6_S290s _1_1_290_290 Q9BXL6 Q9BXL6|Q9BXL6-2|I3L414|Q9BXL6-3 Caspase recruitment domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17488.17488.2 15.46 10.13 99 1 1 1 0 799.3874 1517.8009 S290s TMT10 285 (K) DILEQsLDEAR (G) DILEQS(1.0)LDEAR s:Phosphorylated S CARD14 114922.3 3 5 816.1 219.94 HUMAN 1 -14.1049 -9.4193 EKDISGPSPSKKLKK-p Q96GX9;S87-p EKDISGPSPSKKLKK 0.808652261368213 0.00804971844400809 -0.0376666666666667 -0.610333333333333 1.77164453149143 29.8345324091634 -0.0376666666666667 -0.610333333333333 0.665021286655942 0.00103883544445749 -0.457615436560013 -6.37191062694636 Q96GX9 APIP Q96GX9.S87.p_APIP Q96GX9_S87s _1_1_87_87 Q96GX9 Q96GX9|Q96GX9-3|S4R3D6 Methylthioribulose-1-phosphate dehydratase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9730.9730.2 14.47 8.56 2.384 3 1 1 0 891.9996 1703.0306 S87s TMT10 82 (K) DISGPsPSKK (L) DIS(0.0)GPS(0.99)PS(0.0)KK K:TMT10,s:Phosphorylated S APIP 27752.4 13 2 3832.1 42.1 HUMAN 1 -1.7716 -29.8345 EKEALPISESSFKLL-p Q86TI0-2;S556-p EKEALPISESSFKLL 0.17368064594083 0.0480248023052339 -0.326333333333333 -0.324333333333333 15.1524639137867 17.6349420747859 -0.326333333333333 -0.324333333333333 0.0305318843463573 0.0172387508352894 -2.90709512248771 -3.38605627526969 Q86TI0 TBC1D1 Q86TI0.2.S556.p_TBC1D1 Q86TI0-2_S556s _1_1_556_556 Q86TI0-2 Q86TI0|Q86TI0-2 Isoform 2 of TBC1 domain family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22388.22388.3 11.92 9.93 1.203 3 1 1 0 582.6439 1665.9464 S556s TMT10 551 (K) EALPIsESSFK (L) EALPIS(0.99)ES(0.0)S(0.0)FK K:TMT10,s:Phosphorylated S TBC1D1 132688.3 2 7 587.1 264.9 HUMAN 1 -15.1525 -17.6349 EKEAMCLSAPALALK-p P54198;S675-p EKEAMCLSAPALALK 0.708046873229158 0.00298089814036961 0.0716666666666667 0.675333333333333 2.81873377570406 37.9913897371585 0.0716666666666667 0.675333333333333 0.522548520472902 0.000158803849685857 0.683348311415815 9.2636054401535 P54198 HIRA P54198.S675.p_HIRA P54198_S675s _1_1_675_675 P54198 P54198 Protein HIRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27263.27263.3 15.21 12.64 99 1 1 1 0 638.34 1833.0378 S675s TMT10 670 (K) EAMCLsAPALALK (L) EAMCLS(1.0)APALALK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HIRA 113316.6 1 8 1371.1 149.22 HUMAN 1 2.8187 37.9914 EKEELDVSVREEEVS-p Q9UJX4;S195-p EKEELDVSVREEEVS 0.0745793811074775 0.00176923659520671 0.547 -1.10166666666667 24.1567444554871 43.5033689613985 0.547 -1.10166666666667 0.00383994986734314 4.46337219744933e-05 4.83332783398022 -11.8251896959563 Q9UJX4 ANAPC5 Q9UJX4.S195.p_ANAPC5 Q9UJX4_S195s _1_1_195_195 Q9UJX4 Q9UJX4|F5H0F9|Q9UJX4-3|Q9UJX4-2 Anaphase-promoting complex subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17599.17599.5 15.03 10.24 2.13 4 1 1 0 778.8077 3810.0435 S195s TMT10 186 (R) KMEKEELDVsVREEEVSCSGPLSQK (Q) KMEKEELDVS(0.99)VREEEVS(0.0)CS(0.0)GPLS(0.0)QK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ANAPC5 85760.1 2 1 3031.1 62.7 HUMAN 1 24.1567 -43.5034 EKEEPAPSN______-p Q8N163;S922-p EKEEPAPSN______ 0.257173550014472 0.241921662170648 0.161666666666667 -0.117333333333333 11.205104170634 8.11830523510595 0.161666666666667 -0.117333333333333 0.0757686558645581 0.154230219434523 2.19208150916093 -1.65514456632789 Q8N163 CCAR2 Q8N163.S922.p_CCAR2 Q8N163_S922s _1_1_922_922 Q8N163 Q8N163 Cell cycle and apoptosis regulator protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16358.16358.2 15.68 15.68 15.68 2 1 1 0 1049.0026 2017.0279 S922s TMT10 910 (K) ADSWVEKEEPAPsN (-) ADS(0.0)WVEKEEPAPS(0.99)N K:TMT10,s:Phosphorylated S CCAR2 103527.3 3 11 891.1 204.52 HUMAN 1 11.2051 -8.1183 EKEFGDGSDENEMEE-p Q5F1R6-3;S283-p EKEFGDGSDENEMEE 0.270018114980666 0.939636370190457 -0.599 -0.0693333333333333 10.7753231214267 0.385414622868181 -0.599 -0.0693333333333335 0.0836503356371114 0.915078892123138 -2.11679272964923 -0.111701376043243 Q5F1R6 DNAJC21 Q5F1R6.3.S283.p_DNAJC21 Q5F1R6-3_S283s _1_1_283_283 Q5F1R6-3 Q5F1R6-2|Q5F1R6-3 Isoform 3 of DnaJ homolog subfamily C member 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15789.15789.4 16.91 16.91 99 1 1 1 0 634.0266 2453.1179 S283s TMT10 278 (K) EFGDGsDENEMEEHELK (D) EFGDGS(1.0)DENEMEEHELK K:TMT10,s:Phosphorylated S DNAJC21 64139.2 2 1 1325.1 153.94 HUMAN 1 -10.7753 -0.3854 EKEGAAGSPGGPRAA-p A0A087X1R1;S864-p EKEGAAGSPGGPRAA 0.148370016834103 0.119251882332021 0.778666666666667 -0.172 16.7238062658011 12.1801743070853 0.778666666666667 -0.172 0.0212627470862454 0.0605316579468 3.20843224364964 -2.36313382769817 A0A087X1R1 SMTN A0A087X1R1.S864.p_SMTN A0A087X1R1_S864s _1_1_864_864 A0A087X1R1 A0A087X1R1|A0A087WVP4|P53814-6|P53814-5 Smoothelin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4642.4642.2 8.29 8.29 99 1 1 1 0 632.7998 1184.6221 S864s TMT10 859 (K) EGAAGsPGGPR (A) EGAAGS(1.0)PGGPR s:Phosphorylated S SMTN 108527.2 1 13 826.1 217.61 HUMAN 1 16.7238 -12.1802 EKEGWKKSDFQVNLN-p O60716-3;S847-p EKEGWKKSDFQVNLN 0.815451491549817 0.731678935675793 -0.0416666666666667 0.05 1.70015250828364 1.86987304556897 -0.0416666666666667 0.05 0.676059234255932 0.650148695431748 -0.441324883455849 0.479733287510083 O60716 CTNND1 O60716.3.S847.p_CTNND1 O60716-3_S847s_1_1_847_847 O60716-3 O60716|O60716-11|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-14|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-24|O60716-25|O60716-26|O60716-28|O60716-30|O60716-27|O60716-29|O60716-31|O60716-32 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18255.18255.4 12.96 12.96 2.014 2 1 1 0 691.1129 2680.4774 S847s N854n TMT10 842 (K) EGWKKsDFQVNLnNASR (S) EGWKKS(0.99)DFQVN(0.0)LN(0.99)N(0.0)AS(0.0)R K:TMT10,s:Phosphorylated S,n:Deamidated CTNND1 105545.3 6 30 21.1 1014.17 HUMAN 1 -1.7002 1.8699 EKEKEDNSSEEEEEI-p Q4LE39;S295-p EKEKEDNSSEEEEEI 0.80284168800204 0.128296474883326 -0.0533333333333333 0.322333333333333 1.83682406272349 11.758889981385 -0.0533333333333334 0.322333333333333 0.655115075803928 0.0666977220959055 -0.472354456106757 2.28852501615793 Q4LE39 ARID4B Q4LE39.S295.p_ARID4B Q4LE39_S295sS296s_2_2_295_296 Q4LE39 Q4LE39|Q4LE39-2|Q4LE39-3 AT-rich interactive domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28685.28685.4 11.22 11.22 11.223 3 2 2 0 1116.2733 4302.1181 S295s S296s TMT10 290 (K) EKEDNssEEEEEIEPFPEERENFLQQLYK (F) EKEDNS(0.99)S(0.99)EEEEEIEPFPEERENFLQQLY(0.0)K K:TMT10,s:Phosphorylated S ARID4B 148890.9 2 19 191.1 463.89 HUMAN 1 -1.8368 11.7589 EKEKKEKTPATTPEA-p Q8NI27;T1285-p EKEKKEKTPATTPEA 0.535204694146268 0.394298827873055 -0.0926666666666667 0.105 5.02530801766914 5.37280590682936 -0.0926666666666667 0.105 0.314390343512089 0.290214701808766 -1.10869392826129 1.17170711931277 Q8NI27 THOC2 Q8NI27.T1285.p_THOC2 Q8NI27_T1285t _1_1_1285_1285 Q8NI27 Q8NI27|A0A0C4DG98|Q8NI27-2 THO complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.4812.4812.3 11.02 7.27 1.394 3 1 1 0 699.3947 2016.2057 T1285t TMT10 1282 (K) KEKtPATTPEAR (V) KEKT(0.99)PAT(0.0)T(0.0)PEAR K:TMT10,t:Phosphorylated T THOC2 184654.1 3 5 512.1 287.1 HUMAN 1 -5.0253 5.3728 EKELNGDSDLDPENE-p Q15061;S666-p EKELNGDSDLDPENE 0.344499746607644 0.547186825919272 -1.03133333333333 -0.323666666666667 8.5947892565892 3.52142500592169 -1.03133333333333 -0.323666666666667 0.138204146847715 0.444485399106008 -1.73821859975781 -0.824340108258502 Q15061 WDR43 Q15061.S666.p_WDR43 Q15061_S666s _1_1_666_666 Q15061 Q15061 WD repeat-containing protein 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.15294.15294.2 11.18 8.72 2.941 2 1 1 0 1115.4388 2149.9094 S666s TMT10 661 (K) ELNGDsDLDPENESEEE (-) ELNGDS(0.99)DLDPENES(0.0)EEE s:Phosphorylated S WDR43 75859.2 1 7 2318.1 87.99 HUMAN 1 -8.5948 -3.5214 EKELQELTKPKESSR-p Q96HH4;T133-p EKELQELTKPKESSR 0.260500871092678 0.114397790707448 0.658666666666667 -1.02833333333333 11.0686480325236 12.4183588106572 0.658666666666667 -1.02833333333333 0.0781871164776749 0.0573012530257127 2.16814027327728 -2.40551743792434 Q96HH4 TMEM169 Q96HH4.T133.p_TMEM169 Q96HH4_T133t _1_1_133_133 Q96HH4 Q96HH4 Transmembrane protein 169 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8231.8231.3 8.09 2.6 99 1 1 1 0 618.3683 1773.1089 T133t TMT10 128 (K) ELQELtKPK (E) ELQELT(1.0)KPK K:TMT10,t:Phosphorylated T TMEM169 34009.9 2 1 7032.1 8.09 HUMAN 1 11.0686 -12.4184 EKEMKTTSPLEEEER-p Q9UKV3;S365-p EKEMKTTSPLEEEER 0.306684187031916 0.0225754787621718 0.163666666666667 0.318 9.60681337421251 22.4858571643365 0.163666666666667 0.318 0.109475934880087 0.00564175579370102 1.9134738792502 4.42910801444899 Q9UKV3 ACIN1 Q9UKV3.S365.p_ACIN1 Q9UKV3_S365s _1_1_365_365 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15026.15026.2 10.81 6.06 1.109 3 1 1 0 1050.0369 2019.101 S365s TMT10 363 (K) TTsPLEEEEREIK (S) T(0.0)T(0.0)S(0.99)PLEEEEREIK K:TMT10,s:Phosphorylated S ACIN1 152258.2 7 8 32.2 899.18 HUMAN 1 9.6068 22.4859 EKENQINSFGKSVPG-p Q13043;S410-p EKENQINSFGKSVPG 0.148266672319898 0.00229157720807913 -0.313 -0.739 16.7679162087854 40.7121119664454 -0.313 -0.739 0.0210478809728839 8.48767620454628e-05 -3.21706260761311 -10.4563466008322 Q13043 STK4 Q13043.S410.p_STK4 Q13043_S410s _1_1_410_410 Q13043 Q13043 Serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11648.11648.3 13.85 13.85 99 1 1 1 0 687.7043 1981.1322 S410s TMT10 403 (K) EKENQINsFGK (S) EKENQINS(1.0)FGK K:TMT10,s:Phosphorylated S STK4 55857.4 2 2 1088.2 179.29 HUMAN 1 -16.7679 -40.7121 EKERKPFSVSSTPTM-p P82094-2;S928-p EKERKPFSVSSTPTM 0.925978143058403 0.261384253526834 0.0146666666666667 0.142 0.659644854556477 7.67750301674982 0.0146666666666667 0.142 0.859083770432086 0.17070635859156 0.186180623706159 1.5786815692613 P82094 TMF1 P82094.2.S928.p_TMF1 P82094-2_S928s _1_1_928_928 P82094-2 P82094-2 Isoform 2 of TATA element modulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12529.12529.2 9.13 9.13 1.115 6 1 1 0 867.4288 1653.8832 S928s Hydrogen 925 (R) KPFsVSSTPTMSR (S) KPFS(0.99)VS(0.0)S(0.0)T(0.0)PT(0.0)MS(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S TMF1 123666.4 2 16 393.1 331.84 HUMAN 1 0.6596 7.6775 EKERKRRSPSPKPTK-p Q15287;S155-p EKERKRRSPSPKPTK 0.0636603099033149 0.208852488679825 0.772666666666667 -0.192666666666667 25.8299382115949 8.94683658462094 0.772666666666667 -0.192666666666667 0.0026121985186826 0.127443104279969 5.2570925586543 -1.79851710325548 Q15287 RNPS1 Q15287.S155.p_RNPS1 Q15287_S155sS157s_2_2_155_157 Q15287 Q15287|Q15287-2|Q15287-3|H3BMS0|H3BV80 RNA-binding protein with serine-rich domain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3382.3382.4 10.74 10.74 10.736 3 2 2 0 443.7397 1612.0059 S155s S157s Hydrogen 153 (K) RRsPsPKPTK (V) RRS(0.99)PS(0.99)PKPT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S RNPS1 34207.7 29 5 2314.1 88.32 HUMAN 1 25.8299 -8.9468 EKERPEISPPSDFEH-p Q13177;S75-p EKERPEISPPSDFEH 0.930500316355168 0.497707413972084 0.017 0.068 0.621162914846485 4.05465379174762 0.017 0.068 0.866729759554362 0.393128582845318 0.17595099960866 0.927403745245381 Q13177 PAK2 Q13177.S75.p_PAK2 Q13177_S75s _1_1_75_75 Q13177 Q13177 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31339.31339.4 19.04 19.04 1.73 5 1 1 0 1070.5012 4199.013 S75s TMT10 70 (K) ERPEIsPPSDFEHTIHVGFDAVTGEFTGMPEQWAR (L) ERPEIS(0.99)PPS(0.0)DFEHT(0.0)IHVGFDAVT(0.0)GEFT(0.0)GMPEQWAR s:Phosphorylated S PAK2 58326.8 5 20 272.1 393.22 HUMAN 1 0.6212 4.0547 EKESEPESPMDVDNS-p Q86W56;S302-p EKESEPESPMDVDNS 0.0636603099033149 0.160942856322515 -0.738333333333333 0.175 25.8327491767844 10.4331221597912 -0.738333333333334 0.175 0.00261050832375405 0.0905081700231445 -5.25782580679663 2.05619699568655 Q86W56 BPHL Q86W56.S302.p_BPHL Q86W56_S302s _1_1_302_302 Q86W56 Q86W56|Q86W56-2|Q86W56-3 Poly(ADP-ribose) glycohydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12146.12146.2 18.21 15.63 5.05 3 1 1 0 1051.4736 2021.9738 S302s TMT10 297 (K) ESEPEsPMDVDNSK (N) ES(0.0)EPES(0.99)PMDVDNS(0.0)K K:TMT10,s:Phosphorylated S PARG 112534.8 4 7 855.1 211.13 HUMAN 1 -25.8327 10.4331 EKESQRKSIDPALSM-p Q9H501;S823-p EKESQRKSIDPALSM 0.187294971032731 0.0183996437141296 -0.608333333333333 -0.383 14.2810026894141 23.8805983442158 -0.608333333333333 -0.383 0.0373163992578914 0.00409204278198463 -2.74465856313138 -4.76014252480439 Q9H501 ESF1 Q9H501.S823.p_ESF1 Q9H501_S823s _1_1_823_823 Q9H501 Q9H501 ESF1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33010.33010.3 16.11 14.29 10.136 2 1 1 0 575.9924 1645.9963 S823s TMT10 823 (K) sIDPALSMLIK (S) S(0.99)IDPALS(0.0)MLIK K:TMT10,s:Phosphorylated S ESF1 99193.8 1 12 500.1 291.39 HUMAN 1 -14.281 -23.8806 EKESRRKTPEASAIG-p Q13615;T731-p EKESRRKTPEASAIG 0.712324920975885 0.197361584814768 0.061 -0.145666666666667 2.77204077044501 9.27261404318486 0.061 -0.145666666666667 0.528196991169702 0.118232969054417 0.673718282222817 -1.8548750085605 Q13615 MTMR3 Q13615.T731.p_MTMR3 Q13615_T731t _1_1_731_731 Q13615 Q13615|Q13615-2|Q13615-3|G5E953 Myotubularin-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13522.13522.4 19.17 16.35 1.601 2 1 1 0 746.6485 2903.6103 T731t TMT10 729 (R) RKtPEASAIGLHQDPELGDAALR (S) RKT(0.99)PEAS(0.0)AIGLHQDPELGDAALR K:TMT10,t:Phosphorylated T MTMR3 136241 2 8 913.1 201.43 HUMAN 1 2.772 -9.2726 EKETIELSPTGRPKR-p A0A0B4J1V9;S549-p EKETIELSPTGRPKR 0.248798577375663 0.00101854180503129 -0.182666666666667 -1.26666666666667 11.5340132050474 51.9434718604886 -0.182666666666667 -1.26666666666667 0.0702422928691983 6.39223619559444e-06 -2.24994354445328 -17.0669122164911 A0A0B4J1V9 HELLS A0A0B4J1V9.S549.p_HELLS A0A0B4J1V9_S549s _1_1_549_549 A0A0B4J1V9 A0A0B4J1V9|Q9NRZ9-6|A0A087WSW7|Q9NRZ9-2|Q9NRZ9-3|Q9NRZ9-4|Q9NRZ9-5|F6XU50 Helicase, lymphoid-specific, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12834.12834.3 11.47 11.47 2 3 1 1 0 622.6763 1786.0475 S549s TMT10 544 (K) ETIELsPTGRPK (R) ET(0.0)IELS(0.99)PT(0.0)GRPK K:TMT10,s:Phosphorylated S HELLS 103341.1 6 2 2348.1 87.11 HUMAN 1 -11.534 -51.9435 EKEVDFDSDPMEECL-p Q8N1G1;S610-p EKEVDFDSDPMEECL 0.474773316010134 0.588008077659963 -0.123 0.064 5.9603301773756 3.11627251277092 -0.123 0.064 0.253493590175389 0.487947108433129 -1.27749349568908 0.743824468492615 Q8N1G1 REXO1 Q8N1G1.S610.p_REXO1 Q8N1G1_S610s _1_1_610_610 Q8N1G1 Q8N1G1 RNA exonuclease 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22193.22232.3 15.96 15.96 99 1 1 1 0 684.282 1970.8673 S610s TMT10 605 (K) EVDFDsDPMEECLR (I) EVDFDS(1.0)DPMEECLR C:Carbamidomethylation,s:Phosphorylated S REXO1 132819.4 3 5 1940.1 106.1 HUMAN 1 -5.9603 3.1163 EKEYFDDSTEERFYK-p Q8NEF9;S264-p EKEYFDDSTEERFYK 0.102425402330223 0.163409657484901 -1.043 0.566333333333333 20.9369070792803 10.3430243952766 -1.043 0.566333333333333 0.00805952212909668 0.0924054445005963 -4.08296842975258 2.04051637640913 Q8NEF9 SRFBP1 Q8NEF9.S264.p_SRFBP1 Q8NEF9_S264s _1_1_264_264 Q8NEF9 Q8NEF9 Serum response factor-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19045.19045.3 16.94 16.94 1.249 4 1 1 0 756.3478 2187.0646 S264s TMT10 259 (K) EYFDDsTEERFYK (Q) EY(0.0)FDDS(0.99)T(0.0)EERFY(0.0)K K:TMT10,s:Phosphorylated S SRFBP1 48747.1 3 3 1171.1 170.26 HUMAN 1 -20.9369 10.343 EKFGKGGTYPRRYHV-p Q9Y2U5;T263-p EKFGKGGTYPRRYHV 0.976479243546424 0.377275226915819 0.00566666666666665 -0.287333333333333 0.203178426027941 5.62281977132008 0.00566666666666668 -0.287333333333333 0.954293921185558 0.273979471042534 0.0600201841499955 -1.21679546218181 Q9Y2U5 MAP3K2 Q9Y2U5.T263.p_MAP3K2 Q9Y2U5_T263t _1_1_263_263 Q9Y2U5 Q9Y2U5 Mitogen-activated protein kinase kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8000.8000.4 7.11 7.11 7.112 2 1 1 0 419.9808 1596.9375 T263t TMT10 258 (K) FGKGGtYPRR (Y) FGKGGT(0.99)Y(0.0)PRR K:TMT10,t:Phosphorylated T MAP3K2 70081.9 2 13 1082.1 179.91 HUMAN 1 0.2032 -5.6228 EKFRQKASIHEAWTD-p O43707;S423-p EKFRQKASIHEAWTD 0.425998757587894 0.57996969532645 -0.126333333333333 -0.0563333333333333 6.82846972572515 3.19195985380085 -0.126333333333333 -0.0563333333333333 0.20756447600515 0.479517006717977 -1.43095306324171 -0.759028464364999 O43707 ACTN4 O43707.S423.p_ACTN4 O43707_S423s _1_1_423_423 O43707 P12814-4|P12814-3|O43707|P12814-2|H9KV75|O43707-2 Alpha-actinin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11850.11850.4 9.59 9.59 4.245 2 1 1 0 560.3041 2158.2224 S423s TMT10 420 (R) QKAsIHEAWTDGK (E) QKAS(0.99)IHEAWT(0.0)DGK K:TMT10,s:Phosphorylated S ACTN4 105308.6 2 5 1097.1 178.17 HUMAN 1 -6.8285 -3.192 EKGALTLSSPEVRFH-p Q9Y2L1;S633-p EKGALTLSSPEVRFH 0.812521070407363 0.234191460505823 0.0353333333333333 0.124 1.73472490164893 8.30150434035143 0.0353333333333333 0.124 0.670698769922711 0.147859613272872 0.44921920976415 1.68687118306939 Q9Y2L1 DIS3 Q9Y2L1.S633.p_DIS3 Q9Y2L1_S633s _1_1_633_633 Q9Y2L1 Q9Y2L1|Q9Y2L1-2|G3V1J5 Exosome complex exonuclease RRP44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16242.16242.2 13.61 10.4 1.201 3 1 1 0 719.8792 1358.7841 S633s TMT10 628 (K) GALTLsSPEVR (F) GALT(0.0)LS(0.99)S(0.0)PEVR s:Phosphorylated S DIS3 110084.8 3 3 3526.1 49.02 HUMAN 1 1.7347 8.3015 EKGEAEQSEEEADEE-p P46821;S1016-p EKGEAEQSEEEADEE 0.254504068269259 0.0134953174819545 -0.389 0.632666666666667 11.3120043038489 25.9942325333279 -0.389 0.632666666666667 0.0739264020046818 0.00251522445345472 -2.21086280501924 5.29312180347781 P46821 MAP1B P46821.S1016.p_MAP1B P46821_S1016s _1_1_1016_1016 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28162.28162.5 14.19 14.19 3.651 3 1 1 0 1150.3229 5667.6296 S1016s TMT10 1011 (K) GEAEQsEEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK (A) GEAEQS(0.99)EEEADEEDKAEDAREEEY(0.0)EPEKMEAEDY(0.0)VMAVVDK K:TMT10,s:Phosphorylated S MAP1B 271827.6 1 6 210.1 442.48 HUMAN 1 -11.312 25.9942 EKGEKHHSDSDEEKS-p Q9UPT8;S92-p EKGEKHHSDSDEEKS 0.0544601171191331 0.0373007130659387 2.97866666666667 -1.33733333333333 27.5150459128785 19.1954877928784 2.97866666666667 -1.33733333333333 0.00177212931038457 0.0120351420533615 5.71028146308292 -3.70509061851389 Q9UPT8 ZC3H4 Q9UPT8.S92.p_ZC3H4 Q9UPT8_S92sS94s_2_2_92_94 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3187.3187.5 8.94 8.94 8.937 3 2 2 0 448.4029 2078.0528 S92s S94s TMT10 90 (K) HHsDsDEEKSHRR (L) HHS(0.99)DS(0.99)DEEKS(0.0)HRR K:TMT10,s:Phosphorylated S ZC3H4 140881.7 2 13 427.1 318.7 HUMAN 1 27.515 -19.1955 EKGELDLSLENLDLS-p Q01804;S893-p EKGELDLSLENLDLS 0.0619140312842467 0.0456921667392721 -0.494666666666667 -0.244 26.3139354598415 17.9344002848666 -0.494666666666667 -0.244 0.00233671880720754 0.0160901455058367 -5.38444021896377 -3.44619298327574 Q01804 OTUD4 Q01804.S893.p_OTUD4 Q01804_S893s _1_1_893_893 Q01804 Q01804|Q01804-3|Q01804-5 OTU domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29784.29784.3 17.18 17.18 3.99 3 1 1 0 1146.2789 3356.8768 S893s TMT10 878 (R) QNIVLPSDEKGELDLsLENLDLSK (D) QNIVLPS(0.0)DEKGELDLS(0.99)LENLDLS(0.0)K K:TMT10,s:Phosphorylated S OTUD4 124898 2 3 1668.1 122.34 HUMAN 1 -26.3139 -17.9344 EKGGIYVSKVTVGSI-p Q8TDM6;S1375-p EKGGIYVSKVTVGSI 0.836372411785846 0.329949574913103 -0.0313333333333333 -0.159 1.49973113193845 6.37651485554257 -0.0313333333333334 -0.159 0.707989614069018 0.230328942926979 -0.39492472367258 -1.35102993793412 Q8TDM6 DLG5 Q8TDM6.S1375.p_DLG5 Q8TDM6_S1375s _1_1_1375_1375 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2|Q8TDM6-5 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13449.13449.2 9.81 3.52 9.813 2 1 1 0 631.3518 1181.7294 S1375s TMT10 1370 (K) GGIYVsK (V) GGIY(0.0)VS(0.99)K K:TMT10,s:Phosphorylated S DLG5 215575.4 2 37 34.1 890.58 HUMAN 1 -1.4997 -6.3765 EKGGRLPTPKLRELG-p Q8TC05;T515-p EKGGRLPTPKLRELG 0.713870565238222 0.08780662083977 -0.0516666666666667 0.233333333333333 2.75902247457129 13.9862800741852 -0.0516666666666667 0.233333333333333 0.529782675836935 0.0399366831394501 -0.671027129663166 2.68878880098043 Q8TC05 MDM1 Q8TC05.T515.p_MDM1 Q8TC05_T515t _1_1_515_515 Q8TC05 Q8TC05|Q8TC05-4 Nuclear protein MDM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7765.7765.3 7.41 3.03 99 1 1 1 0 455.267 1283.82 T515t TMT10 510 (K) GGRLPtPK (L) GGRLPT(1.0)PK K:TMT10,t:Phosphorylated T MDM1 81019 2 7 1888.1 108.98 HUMAN 1 -2.759 13.9863 EKGKEGDSEKESEKS-p Q8TAQ2;S806-p EKGKEGDSEKESEKS 0.303082902073058 0.00488304937085382 -0.323333333333333 0.727333333333333 9.71511157985333 33.7670410547807 -0.323333333333333 0.727333333333333 0.106779735811197 0.000420045072602058 -1.93225533584878 7.6511609753708 Q8TAQ2 SMARCC2 Q8TAQ2.S806.p_SMARCC2 Q8TAQ2_S806s _1_1_806_806 Q8TAQ2 F8VXC8|Q8TAQ2|Q8TAQ2-3|Q8TAQ2-2 SWI/SNF complex subunit SMARCC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5292.5292.3 10.02 10.02 10.019 2 1 1 0 773.747 2239.2588 S806s TMT10 801 (K) GKEGDsEKESEK (S) GKEGDS(0.99)EKES(0.0)EK K:TMT10,s:Phosphorylated S SMARCC2 133276.4 2 9 499.1 292.05 HUMAN 1 -9.7151 33.767 EKGLEGKSPDTGPDW-p O14686-3;S4852-p EKGLEGKSPDTGPDW 0.748585233589614 0.586615675228329 0.044 0.062 2.38978032679243 3.13179916029294 0.044 0.0620000000000001 0.576795637915233 0.486205742554722 0.593490356372939 0.746949877028004 O14686 KMT2D O14686.3.S4852.p_KMT2D O14686-3_S4852s _1_1_4852_4852 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.20465.20465.3 12.15 10.77 1.122 2 1 1 0 789.7569 2287.2901 S4852s TMT10 4847 (K) GLEGKsPDTGPDWLK (Q) GLEGKS(0.99)PDT(0.0)GPDWLK K:TMT10,s:Phosphorylated S KMT2D 600227.3 5 44 17.1 1042.08 HUMAN 1 2.3898 3.1318 EKGNKALSVGNIDDA-p P31948-2;S63-p EKGNKALSVGNIDDA 0.00861592953244037 0.00160137763209639 -1.493 -1.191 52.6939651795125 44.7070391589483 -1.493 -1.191 5.37778557700589e-06 3.38295393482167e-05 -17.6868732507204 -12.4655549035457 P31948 STIP1 P31948.2.S63.p_STIP1 P31948-2_S63s _1_1_63_63 P31948-2 P31948-2|P31948-3|F5H783|F5GXD8 Isoform 2 of Stress-induced-phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30124.30124.5 25.17 25.17 10.291 5 1 1 0 811.0084 3971.0486 S63s TMT10 61 (K) ALsVGNIDDALQCYSEAIKLDPHNHVLYSNR (S) ALS(0.99)VGNIDDALQCY(0.0)S(0.0)EAIKLDPHNHVLY(0.0)S(0.0)NR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S STIP1 68763.9 6 1 1370.1 149.31 HUMAN 1 -52.694 -44.707 EKGPQYGSLERAWGA-p Q9BY11;S79-p EKGPQYGSLERAWGA 0.43606840550564 0.050124945718593 -0.157 -0.247 6.63514767390671 17.3736214694295 -0.157 -0.247 0.217012741109463 0.0183078713960479 -1.3969840988361 -3.33397833468192 Q9BY11 PACSIN1 Q9BY11.S79.p_PACSIN1 Q9BY11_S79s _1_1_79_79 Q9BY11 Q9BY11|F6U236 Protein kinase C and casein kinase substrate in neurons protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8922.8922.2 10.78 4.01 9.151 2 1 1 0 658.3165 1235.6582 S79s TMT10 74 (K) GPQYGsLER (A) GPQY(0.0)GS(0.99)LER s:Phosphorylated S PACSIN1 51307 1 2 968.1 193.63 HUMAN 1 -6.6351 -17.3736 EKGPQYGTLEKAWHA-p Q9UKS6;T76-p EKGPQYGTLEKAWHA 0.349923745599536 0.00462437619115908 -0.208666666666667 -0.598333333333333 8.47188730152783 34.1778245481928 -0.208666666666667 -0.598333333333333 0.142171082391556 0.000382135640873433 -1.7169385412011 -7.79639300184611 Q9UKS6 PACSIN3 Q9UKS6.T76.p_PACSIN3 Q9UKS6_T76t _1_1_76_76 Q9UKS6 Q9UKS6|E9PIY1 Protein kinase C and casein kinase substrate in neurons protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12287.12287.3 7.22 7.22 7.216 2 1 1 0 510.9376 1450.8306 T76t TMT10 71 (K) GPQYGtLEK (A) GPQY(0.0)GT(0.99)LEK K:TMT10,t:Phosphorylated T PACSIN3 48828.3 1 1 547.1 275.62 HUMAN 1 -8.4719 -34.1778 EKGQKRPSDGNSGLM-p P29374;S1076-p EKGQKRPSDGNSGLM 0.195833302355488 0.159188365613532 -0.469 -0.386 13.8116291352496 10.4992165708566 -0.469 -0.386 0.0415754622427472 0.0891411726485742 -2.65839799471693 -2.06770721053921 P29374 ARID4A P29374.S1076.p_ARID4A P29374_S1076s _1_1_1076_1076 P29374 P29374|P29374-2|P29374-3 AT-rich interactive domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9521.9521.3 10.96 10.96 2.14 2 1 1 0 590.972 1690.9311 S1076s TMT10 1074 (K) RPsDGNSGLMAK (K) RPS(0.99)DGNS(0.0)GLMAK K:TMT10,s:Phosphorylated S ARID4A 143719.1 1 7 532.1 280.77 HUMAN 1 -13.8116 -10.4992 EKGSETDSAQDQPVK-p P30419;S73-p EKGSETDSAQDQPVK 0.613352365905399 0.0619932416875703 0.0706666666666667 0.218666666666667 3.9376867278832 16.0766097424886 0.0706666666666667 0.218666666666667 0.403860452194632 0.0246796516702026 0.905199497259599 3.08072424477689 P30419 NMT1 P30419.S73.p_NMT1 P30419_S73s _1_1_73_73 P30419 P30419|B7Z8J4 Glycylpeptide N-tetradecanoyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7430.7747.3 16.26 16.26 2.525 3 1 1 0 796.0759 2306.2443 S73s TMT10 66 (K) EKGSETDsAQDQPVK (M) EKGS(0.0)ET(0.0)DS(0.99)AQDQPVK K:TMT10,s:Phosphorylated S NMT1 57147.5 2 4 1576.1 130.17 HUMAN 1 3.9377 16.0766 EKGVLDLSYGPGPSL-p Q5JSZ5;S194-p EKGVLDLSYGPGPSL 0.194950907975575 0.0232463718723308 -0.272666666666667 -0.304666666666667 13.8472633139766 22.2947806659468 -0.272666666666667 -0.304666666666667 0.0412357282224773 0.00589551750759432 -2.66491838996954 -4.38494834563026 Q5JSZ5 PRRC2B Q5JSZ5.S194.p_PRRC2B Q5JSZ5_S194s _1_1_194_194 Q5JSZ5 Q5JSZ5|Q5JSZ5-5|A0A1W2PQP5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25801.25801.4 21.55 18.66 3.082 5 1 1 0 677.8506 2628.4096 S194s TMT10 189 (K) GVLDLsYGPGPSLRPQNVTSWR (E) GVLDLS(0.99)Y(0.0)GPGPS(0.0)LRPQNVT(0.0)S(0.0)WR s:Phosphorylated S PRRC2B 244103.4 2 50 36.2 882.05 HUMAN 1 -13.8473 -22.2948 EKHKRQMSVPGIFNP-p O14980;S1055-p EKHKRQMSVPGIFNP 0.248798577375663 0.492029355066027 0.186 0.0783333333333334 11.5291805799355 4.11708795169551 0.186 0.0783333333333334 0.0703204986989463 0.387517397504039 2.24909171545604 0.939283396732481 O14980 XPO1 O14980.S1055.p_XPO1 O14980_S1055s_1_1_1055_1055 O14980 O14980 Exportin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26873.26873.3 17.44 17.44 17.444 1 1 1 0 852.3652 2459.1243 S1055s M1069m TMT10 1053 (R) QMsVPGIFNPHEIPEEmCD (-) Q(0.0)M(0.0)S(1.0)VPGIFN(0.0)PHEIPEEM(0.99)CD C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine XPO1 124524.8 2 3 3459.1 50.4 HUMAN 1 11.5292 4.1171 EKHPDADSLYVEKID-p P54577;S386-p EKHPDADSLYVEKID 0.563866696523096 0.567270872941212 0.0776666666666667 -0.073 4.58296645916648 3.3199425807364 0.0776666666666667 -0.073 0.348099463615873 0.465592249204985 1.02704818852426 -0.784562671450655 P54577 YARS P54577.S386.p_YARS P54577_S386s _1_1_386_386 P54577 P54577 Tyrosine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20095.20095.4 9.2 9.2 2.753 3 1 1 0 681.8775 2644.5165 S386s TMT10 375 (K) IITVEKHPDADsLYVEK (I) IIT(0.0)VEKHPDADS(0.99)LY(0.0)VEK K:TMT10,s:Phosphorylated S YARS 59484.7 1 3 4873.1 25.58 HUMAN 1 4.583 -3.3199 EKIDLLASDPHEALI-p P38398;S434-p EKIDLLASDPHEALI 0.186317782283684 0.0182198219774877 -0.285333333333333 -0.417 14.3429999619955 23.945249078549 -0.285333333333333 -0.417 0.036787477018563 0.00403157823689301 -2.7561142698514 -4.77587015867618 P38398 BRCA1 P38398.S434.p_BRCA1 P38398_S434s _1_1_434_434 P38398 P38398|P38398-4|P38398-8|Q5YLB2 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25739.25739.3 17.34 17.34 99 1 1 1 0 745.062 2153.204 S434s TMT10 429 (K) IDLLAsDPHEALICK (S) IDLLAS(1.0)DPHEALICK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRCA1 210227.6 1 5 106.1 588.91 HUMAN 1 -14.343 -23.9452 EKIEDPVYGIYYVDH-p Q96QZ7;Y373-p EKIEDPVYGIYYVDH 0.141557816596311 0.125786399259788 -0.425 0.234666666666667 17.3514503470862 11.8736522759265 -0.425 0.234666666666667 0.0184015736953593 0.0649583182161017 -3.3321797311025 2.30880614897461 Q96QZ7 MAGI1 Q96QZ7.Y373.p_MAGI1 Q96QZ7_Y373y _1_1_373_373 Q96QZ7 Q96QZ7|Q96QZ7-2|Q96QZ7-6|Q96QZ7-7|Q96QZ7-5|Q96QZ7-3|Q96QZ7-4|A0A087WT53|A0A087WXD2 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.27958.27958.4 21.14 21.14 8.941 3 1 1 0 658.8441 2552.3913 Y373y TMT10 368 (K) IEDPVyGIYYVDHINRK (T) IEDPVY(0.99)GIY(0.0)Y(0.0)VDHINRK K:TMT10,y:Phosphorylated Y MAGI1 165548 2 1 158.1 21.14 HUMAN 1 -17.3515 11.8737 EKIEEVLSPEGSPSK-p Q9UEY8;S673-p EKIEEVLSPEGSPSK 0.286755060843315 0.08037670191759 -0.154333333333333 -0.194666666666667 10.2378662782823 14.5264130900159 -0.154333333333333 -0.194666666666667 0.0946702169079085 0.0352662020191082 -2.02306794809583 -2.78834295516531 Q9UEY8 ADD3 Q9UEY8.S673.p_ADD3 Q9UEY8_S673sS677s_2_2_673_677 Q9UEY8 Q9UEY8|Q9UEY8-2 Gamma-adducin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19497.19497.5 12.05 12.05 3.468 6 2 2 0 658.5496 3128.7861 S673s S677s TMT10 664 (K) SPEKIEEVLsPEGsPSKSPSK (K) S(0.0)PEKIEEVLS(0.99)PEGS(0.99)PS(0.0)KS(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S ADD3 79495.5 15 32 264.2 396.09 HUMAN 1 -10.2379 -14.5264 EKIELNDSVNENSDT-p Q8IUW5;S109-p EKIELNDSVNENSDT 0.0629683487287699 0.360885292368447 -0.592666666666667 -0.136 26.0577647433526 5.87340099041006 -0.592666666666667 -0.136 0.00247869748241579 0.258618686096056 -5.31676181841336 -1.26168378548769 Q8IUW5 RELL1 Q8IUW5.S109.p_RELL1 Q8IUW5_S109s _1_1_109_109 Q8IUW5 Q8IUW5 RELT-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31961.31961.4 21.73 21.73 1.194 4 1 1 0 936.2397 3661.9714 S109s TMT10 101 (K) VEKIELNDsVNENSDTVGQIVHYIMK (N) VEKIELNDS(0.99)VNENS(0.0)DT(0.0)VGQIVHY(0.0)IMK K:TMT10,s:Phosphorylated S RELL1 29624.9 5 1 2329.1 87.71 HUMAN 1 -26.0578 -5.8734 EKIGEGTYGTVFKAK-p Q00535;Y15-p EKIGEGTYGTVFKAK 0.482635422548001 0.0090322518183777 -0.119 -0.445666666666667 5.8243012695291 28.9282254398964 -0.119 -0.445666666666667 0.261559123319482 0.00127990417585318 -1.25320035531657 -6.10332449707868 Q00535 CDK5 Q00535.Y15.p_CDK5 Q00535_Y15y _1_1_15_15 Q00535 Q00535|Q00535-2 Cyclin-dependent-like kinase 5 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.22842.22842.3 16.11 12.03 2.724 3 1 1 0 570.6353 1629.9252 Y15y TMT10 10 (K) IGEGTyGTVFK (A) IGEGT(0.0)Y(0.99)GT(0.0)VFK K:TMT10,y:Phosphorylated Y CDK5 33760.3 4 1 172.1 20.02 HUMAN 1 -5.8243 -28.9282 EKIGEGTYGVVYKAR-p G3V5T9;Y15-p EKIGEGTYGVVYKAR 0.189469922667285 0.000952253650599092 1.853 -1.42066666666667 14.1409694148317 55.3105043024645 1.853 -1.42066666666667 0.0385392322325869 2.94407974760412e-06 2.71883759949804 -19.7296816098981 G3V5T9 CDK2 G3V5T9.Y15.p_CDK2 G3V5T9_Y15y _1_1_15_15 G3V5T9 G3V5T9|Q00526 Cyclin-dependent kinase 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.20615.20615.3 21.94 21.94 1.18 3 1 1 0 770.4312 2229.3098 Y15y TMT10 7 (K) VEKIGEGTyGVVYK (A) VEKIGEGT(0.0)Y(0.99)GVVY(0.0)K K:TMT10,y:Phosphorylated Y CDK2 39577.1 1 2 21.2 73.58 HUMAN 1 14.141 -55.3105 EKIGEGTYGVVYKGR-p P06493;Y15-p EKIGEGTYGVVYKGR 0.94478758147709 0.00387979257248964 0.0126666666666667 -1.44466666666667 0.484747697770278 35.6384155588816 0.0126666666666667 -1.44466666666667 0.894386489569686 0.000272997358027585 0.139119993751389 -8.33223131266111 P06493 CDK1 P06493.Y15.p_CDK1 P06493_Y15y _1_1_15_15 P06493 G3V5T9|Q00526|P24941|A0A024QZP7|P06493|P24941-2|P06493-2|E7ESI2|A0A087WZZ9|G3V317 Cyclin-dependent kinase 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.21801.22585.2 21.44 11.52 2.837 3 1 1 0 862.4592 1643.9409 Y15y TMT10 10 (K) IGEGTyGVVYK (G) IGEGT(0.0)Y(0.99)GVVY(0.0)K K:TMT10,y:Phosphorylated Y CDK1 34151.9 15 4 21.1 73.58 HUMAN 1 0.4847 -35.6384 EKIGKARSPTDDKVK-p Q13523;S257-p EKIGKARSPTDDKVK 0.0719549135296335 0.00363392930998064 1.33133333333333 -1.44233333333333 24.6411941852391 36.2599338968228 1.33133333333333 -1.44233333333333 0.00343463492306736 0.000236595570899538 4.95347254518419 -8.5698120292974 Q13523 PRPF4B Q13523.S257.p_PRPF4B Q13523_S257s _1_1_257_257 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9756.9756.4 10.29 10.29 7.494 2 1 1 0 650.3723 2518.5011 S257s TMT10 255 (K) ARsPTDDKVKIEDK (S) ARS(0.99)PT(0.0)DDKVKIEDK K:TMT10,s:Phosphorylated S PRPF4B 117327.1 13 10 70.1 666.55 HUMAN 1 24.6412 -36.2599 EKIGNEESDLEEACI-p O95714;S1577-p EKIGNEESDLEEACI 0.430550536818263 0.0234393081433852 -0.119333333333333 0.363666666666667 6.73817748477485 22.2341296099539 -0.119333333333333 0.363666666666667 0.211925029128796 0.00597842849186959 -1.41510015267762 4.37098936253567 O95714 HERC2 O95714.S1577.p_HERC2 O95714_S1577s _1_1_1577_1577 O95714 O95714|Q9BVR0 E3 ubiquitin-protein ligase HERC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24543.24543.4 25.6 20.49 14.127 2 1 1 0 1007.038 3945.1723 S1577s TMT10 1572 (K) IGNEEsDLEEACILPHSPINVDKRPIAIK (S) IGNEES(0.99)DLEEACILPHS(0.0)PINVDKRPIAIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HERC2 533836.7 6 3 552.1 274.16 HUMAN 1 -6.7382 22.2341 EKIIARVSIDNRTRA-p Q9NP80;S358-p EKIIARVSIDNRTRA 0.984096222666884 0.0253651387785585 -0.00366666666666667 0.345333333333333 0.139931464593718 21.7174585247945 -0.00366666666666667 0.345333333333333 0.968293136639578 0.00673370594982832 -0.0416213707636371 4.2531932906969 Q9NP80 PNPLA8 Q9NP80.S358.p_PNPLA8 Q9NP80_S358s _1_1_358_358 Q9NP80 Q9NP80|Q9NP80-2|Q9NP80-3 Calcium-independent phospholipase A2-gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14196.14196.3 9.12 5.15 99 1 1 1 0 489.2753 1385.8426 S358s TMT10 353 (K) IIARVsIDNR (T) IIARVS(1.0)IDNR s:Phosphorylated S PNPLA8 89274 1 1 6846.1 9.12 HUMAN 1 -0.1399 21.7175 EKIMQSSSEVGYDAM-p P10809;S499-p EKIMQSSSEVGYDAM 0.151198103969209 0.0253651387785585 0.298 0.389333333333333 16.5311865361091 21.7177693900795 0.298 0.389333333333333 0.0222270254304729 0.0067332239726008 3.17085981726794 4.25326357103292 P10809 HSPD1 P10809.S499.p_HSPD1 P10809_S499s _1_1_499_499 P10809 P10809 60 kDa heat shock protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.34549.34549.4 16.91 16.91 1.102 4 1 1 0 762.3547 2966.435 S499s TMT10 494 (K) IMQSSsEVGYDAMAGDFVNMVEK (G) IMQS(0.0)S(0.0)S(0.99)EVGY(0.0)DAMAGDFVNMVEK K:TMT10,s:Phosphorylated S HSPD1 61224.7 2 12 1165.1 170.59 HUMAN 1 16.5312 21.7178 EKIQVLGSLVSLEMG-p P49419-2;S102-p EKIQVLGSLVSLEMG 0.289073375000317 0.020379930359248 0.175 0.346666666666667 10.1625775787788 23.1498970678255 0.175 0.346666666666667 0.0963257151715439 0.00484183843093756 2.00997043187981 4.58477440383268 P49419 ALDH7A1 P49419.2.S102.p_ALDH7A1 P49419-2_S102s _1_1_102_102 P49419-2 A0A1B0GTG2|A0A1B0GUA1|P49419-2|A0A1B0GTJ4|A0A1B0GTY9|P49419-4 Isoform 2 of Alpha-aminoadipic semialdehyde dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.35891.35891.3 12.89 12.89 1.846 2 1 1 0 671.3795 1932.1604 S102s TMT10 97 (K) IQVLGsLVSLEMGK (I) IQVLGS(0.99)LVS(0.0)LEMGK K:TMT10,s:Phosphorylated S ALDH7A1 55878.9 1 2 2528.1 79.82 HUMAN 1 10.1626 23.1499 EKISLSKSPTKTDPK-p Q5BKZ1;S270-p EKISLSKSPTKTDPK 0.780756931589904 0.0708497881203226 -0.0493333333333333 -0.210666666666667 2.06763465229044 15.2840396778514 -0.0493333333333333 -0.210666666666667 0.621207277335659 0.0296207487393051 -0.523728661355675 -2.92993827989573 Q5BKZ1 ZNF326 Q5BKZ1.S270.p_ZNF326 Q5BKZ1_S270s _1_1_270_270 Q5BKZ1 Q5BKZ1|A0A0A0MRN4|Q5BKZ1-3 DBIRD complex subunit ZNF326 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7442.7442.3 12.91 4.86 3.854 3 1 1 0 876.8025 2548.4276 S270s TMT10 270 (K) sPTKTDPKNEEEEK (R) S(0.99)PT(0.0)KT(0.0)DPKNEEEEK K:TMT10,s:Phosphorylated S ZNF326 65995 25 8 1326.1 153.85 HUMAN 1 -2.0676 -15.284 EKKALEISPRSCELF-p Q8IY92;S1185-p EKKALEISPRSCELF 0.32077638820759 0.0300001465061648 0.194333333333333 -0.372333333333333 9.24514892447293 20.6075355936195 0.194333333333333 -0.372333333333333 0.118983052783058 0.00869453661279836 1.85080795617275 -4.00666879563203 Q8IY92 SLX4 Q8IY92.S1185.p_SLX4 Q8IY92_S1185s _1_1_1185_1185 Q8IY92 Q8IY92|Q8IY92-2 Structure-specific endonuclease subunit SLX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12002.12002.3 9 9 99 1 1 1 0 484.6187 1371.8724 S1185s TMT10 1180 (K) KALEIsPR (S) KALEIS(1.0)PR K:TMT10,s:Phosphorylated S SLX4 201834.1 4 16 218.1 430.83 HUMAN 1 9.2451 -20.6075 EKKEESHSNDQSPQI-p B5MBZ0;S134-p EKKEESHSNDQSPQI 0.709582589954489 0.0972841337777854 0.0686666666666667 -0.297666666666667 2.80172861707475 13.3805738705325 0.0686666666666667 -0.297666666666667 0.524598613337276 0.0459137339075328 0.679845173005743 -2.57841131580816 B5MBZ0 EML4 B5MBZ0.S134.p_EML4 B5MBZ0_S134s _1_1_134_134 B5MBZ0 B5MBZ0|Q9HC35 Echinoderm microtubule-associated protein-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4332.4332.4 9.4 9.4 1.855 3 1 1 0 549.0223 2113.1038 S134s TMT10 129 (K) KEESHsNDQSPQIR (A) KEES(0.0)HS(0.99)NDQS(0.0)PQIR K:TMT10,s:Phosphorylated S EML4 111259.7 1 2 586.1 265.11 HUMAN 1 2.8017 -13.3806 EKKELEDSLERISDQ-p O00291-3;S516-p EKKELEDSLERISDQ 0.28377835512685 0.00625612699194302 -0.231333333333333 0.493333333333333 10.3312856695071 31.7534277216473 -0.231333333333333 0.493333333333333 0.0926555488675302 0.000667816627172744 -2.03932948404961 6.97195280434775 O00291 HIP1 O00291.3.S516.p_HIP1 O00291-3_S516s _1_1_516_516 O00291-3 O00291|O00291-4|O00291-3 Isoform 3 of Huntingtin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14406.14406.4 10.51 5.65 4.974 2 1 1 0 611.067 2361.2774 S516s TMT10 512 (K) ELEDsLERISDQGQRK (T) ELEDS(0.99)LERIS(0.0)DQGQRK K:TMT10,s:Phosphorylated S HIP1 111630.6 2 3 3390.1 52.21 HUMAN 1 -10.3313 31.7534 EKKIPEPSPVTRRKA-p Q7Z4S6-5;S1219-p EKKIPEPSPVTRRKA 0.688148440533523 0.045852198844848 0.067 -0.284333333333333 3.04785628923735 17.9118458225451 0.067 -0.284333333333333 0.49569480917426 0.0161739247329865 0.730115800071609 -3.44164632426565 Q7Z4S6 KIF21A Q7Z4S6.5.S1219.p_KIF21A Q7Z4S6-5_S1219s _1_1_1219_1219 Q7Z4S6-5 Q7Z4S6-4|Q7Z4S6-2|Q7Z4S6-5|Q7Z4S6-3|Q7Z4S6-6 Isoform 5 of Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11008.11629.3 11.43 11.43 3.035 2 1 1 0 554.6518 1581.9728 S1219s TMT10 1214 (K) KIPEPsPVTR (R) KIPEPS(0.99)PVT(0.0)R K:TMT10,s:Phosphorylated S KIF21A 184163.5 9 17 390.1 332.37 HUMAN 1 3.0479 -17.9118 EKKKACRSPTAQSPT-p Q96HH9;S44-p EKKKACRSPTAQSPT 0.697440514777564 0.00226437279650065 -0.0586666666666667 -0.727333333333333 2.93922195425866 40.9179460482491 -0.0586666666666667 -0.727333333333333 0.508250488319718 8.09478643386767e-05 -0.708040325279643 -10.5520483749804 Q96HH9 GRAMD3 Q96HH9.S44.p_GRAMD3 Q96HH9_S44s _1_1_44_44 Q96HH9 Q96HH9-3|Q96HH9-4|E9PD09|D6RFH3|D6R9P9 GRAM domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8675.8675.4 15.01 15.01 1.225 6 1 1 0 806.9111 3144.6562 S44s TMT10 41 (K) ACRsPTAQSPTPSVEADSPDQKK (I) ACRS(0.99)PT(0.0)AQS(0.0)PT(0.0)PS(0.0)VEADS(0.0)PDQKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GRAMD2B 48324.7 3 2 735.1 235.43 HUMAN 1 -2.9392 -40.9179 EKKKKNPTPESVAIG-p Q14CB8-2;T446-p EKKKKNPTPESVAIG 0.363736216795765 0.0168255942720303 -0.238 -0.533 8.15209259526842 24.4830354754177 -0.238 -0.533 0.15303499034712 0.00356202081076276 -1.66153476684462 -4.90806448649722 Q14CB8 ARHGAP19 Q14CB8.2.T446.p_ARHGAP19 Q14CB8-2_T446t _1_1_446_446 Q14CB8-2 Q14CB8-2|Q14CB8-3|Q14CB8-7 Isoform 2 of Rho GTPase-activating protein 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21407.21407.3 11.79 7.7 2.249 2 1 1 0 631.6773 1813.0471 T446t TMT10 444 (K) NPtPESVAIGELK (G) NPT(0.99)PES(0.0)VAIGELK K:TMT10,t:Phosphorylated T ARHGAP19 58444.1 1 3 3437.1 51.09 HUMAN 1 -8.1521 -24.483 EKKKLQHTYLCEEKE-p Q6P0N0;T161-p EKKKLQHTYLCEEKE 0.253130942996308 0.860888438950527 -0.292666666666667 0.021 11.3784094882949 0.91738036178615 -0.292666666666667 0.021 0.0728046387312951 0.809584088183655 -2.22254130676653 0.252999151896582 Q6P0N0 MIS18BP1 Q6P0N0.T161.p_MIS18BP1 Q6P0N0_T161t _1_1_161_161 Q6P0N0 Q6P0N0|G5E9K5|Q6P0N0-2 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12046.12046.3 18.26 18.26 4.149 2 1 1 0 620.312 1778.9511 T161t TMT10 158 (K) LQHtYLCEEK (E) LQHT(0.99)Y(0.0)LCEEK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MIS18BP1 129996 5 9 54.1 728.39 HUMAN 1 -11.3784 0.9174 EKKLADNTDDETLTE-p Q2LD37;T1595-p EKKLADNTDDETLTE 0.256734950293173 0.0719128234737837 0.198 0.254666666666667 11.2167102397609 15.1945860529177 0.198 0.254666666666667 0.0755664423160683 0.0302371876204095 2.19411947050952 2.91309500697067 Q2LD37 KIAA1109 Q2LD37.T1595.p_KIAA1109 Q2LD37_T1595t _1_1_1595_1595 Q2LD37 Q2LD37|Q2LD37-4 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23108.23108.3 17.35 17.35 2.587 6 1 1 0 1148.5616 3363.6956 T1595t TMT10 1590 (K) KLADNtDDETLTEEWTLDQPVSQTR (T) KLADNT(0.99)DDET(0.0)LT(0.0)EEWT(0.0)LDQPVS(0.0)QT(0.0)R K:TMT10,t:Phosphorylated T KIAA1109 559693.9 1 9 143.1 520.8 HUMAN 1 11.2167 15.1946 EKKLEPLSQDEDQHA-p P49366;S78-p EKKLEPLSQDEDQHA 0.838274783466982 0.143783821153633 -0.0303333333333333 0.166333333333333 1.48322952892601 11.0948339635921 -0.0303333333333333 0.166333333333333 0.710684833020698 0.0777171030481245 -0.391054051977029 2.17174296162548 P49366 DHPS P49366.S78.p_DHPS P49366_S78s _1_1_78_78 P49366 A0A087WZK0|P49366|P49366-3|P49366-2|Q5J8M5|B4E3M2|M0QX43|M0R253|M0QYZ7 Deoxyhypusine synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12161.12161.3 19.36 19.36 10.037 3 1 1 0 916.7933 2668.3942 S78s TMT10 73 (K) KLEPLsQDEDQHADLTQSR (R) KLEPLS(0.99)QDEDQHADLT(0.0)QS(0.0)R K:TMT10,s:Phosphorylated S DHPS 41198.1 4 2 3968.1 40 HUMAN 1 -1.4832 11.0948 EKKNKEESSDDEDKE-p P35659;S243-p EKKNKEESSDDEDKE 0.136368951978396 0.108710361083014 -0.602333333333333 0.208 17.7463600505811 12.7323751460111 -0.602333333333333 0.208 0.0168021166281637 0.0533043295668894 -3.41111418847274 2.46163485010624 P35659 DEK P35659.S243.p_DEK P35659_S243sS244s_2_2_243_244 P35659 P35659|B4DFG0|P35659-2 Protein DEK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8967.8967.4 10.49 10.49 10.491 3 2 2 0 914.4478 3494.8359 S243s S244s TMT10 239 (K) NKEEssDDEDKESEEEPPKK (T) NKEES(0.99)S(0.99)DDEDKES(0.0)EEEPPKK K:TMT10,s:Phosphorylated S DEK 42958.8 3 9 488.1 294.94 HUMAN 1 -17.7464 12.7324 EKKPRQHSGDHENLM-p Q9NWQ8;S50-p EKKPRQHSGDHENLM 0.934979371920407 0.0283048487106508 0.0153333333333333 0.383666666666667 0.572690835416254 20.9745304242683 0.0153333333333333 0.383666666666667 0.876457610477324 0.00799000327955157 0.162967151599216 4.08722232274183 Q9NWQ8 PAG1 Q9NWQ8.S50.p_PAG1 Q9NWQ8_S50s _1_1_50_50 Q9NWQ8 Q9NWQ8 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9780.9780.3 13.98 13.98 13.978 2 1 1 0 782.7038 2266.1287 S50s TMT10 48 (R) QHsGDHENLMNVPSDK (E) QHS(0.99)GDHENLMNVPS(0.0)DK K:TMT10,s:Phosphorylated S PAG1 47436.2 2 1 1594.1 129.17 HUMAN 1 0.5727 20.9745 EKKQRRRSPPPGPDG-p P57081;S391-p EKKQRRRSPPPGPDG 0.651183474642633 0.218863566238169 0.0606666666666667 0.134 3.49102791400676 8.68426529278843 0.0606666666666667 0.134 0.447607349268544 0.135385910714726 0.818496725396586 1.75310196986849 P57081 WDR4 P57081.S391.p_WDR4 P57081_S391s _1_1_391_391 P57081 P57081|P57081-2|P57081-3 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3819.4099.3 18.4 18.4 99 1 1 1 0 575.9746 1645.9426 S391s Hydrogen 391 (R) sPPPGPDGHAKK (M) S(1.0)PPPGPDGHAKK K:TMT10-Lys-Only,s:Phosphorylated S WDR4 46230.6 13 1 2090.1 97.98 HUMAN 1 3.491 8.6843 EKKSEAKSPSNGVGS-p Q9NVV0;S262-p EKKSEAKSPSNGVGS 0.25857825003948 0.178556599812438 -0.409666666666667 -0.205666666666667 11.1626724469739 9.84292195958141 -0.409666666666667 -0.205666666666667 0.0765125639160595 0.103683059519037 -2.18463299552969 -1.95365702591858 Q9NVV0 TMEM38B Q9NVV0.S262.p_TMEM38B Q9NVV0_S262s _1_1_262_262 Q9NVV0 Q9NVV0|A0A0A0MRS4 Trimeric intracellular cation channel type B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19177.19177.4 17.69 17.69 1.247 5 1 1 0 724.6415 2815.5768 S262s TMT10 262 (K) sPSNGVGSLASKPVDVASDNVK (K) S(0.99)PS(0.0)NGVGS(0.0)LAS(0.0)KPVDVAS(0.0)DNVK K:TMT10,s:Phosphorylated S TMEM38B 32737.5 3 1 4144.1 36.76 HUMAN 1 -11.1627 -9.8429 EKKTRTDSTSDGRPA-p Q14204;S4368-p EKKTRTDSTSDGRPA 0.339100956339771 0.562503097600281 -0.157 0.056 8.73744196374291 3.36629822812077 -0.157 0.056 0.133738301605707 0.460649047175427 -1.76291376839077 0.793758876770578 Q14204 DYNC1H1 Q14204.S4368.p_DYNC1H1 Q14204_S4368s _1_1_4368_4368 Q14204 Q14204 Cytoplasmic dynein 1 heavy chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8525.8739.3 16.89 16.89 1.105 4 1 1 0 520.5487 1479.6645 S4368s Hydrogen 4366 (R) TDsTSDGRPAWMR (T) T(0.0)DS(0.99)T(0.0)S(0.0)DGRPAWMR s:Phosphorylated S DYNC1H1 535136.6 33 9 1294.1 156.82 HUMAN 1 -8.7374 3.3663 EKKVMPNSPQNGVLV-p A0A0J9YWL0;S737-p EKKVMPNSPQNGVLV 0.491064846998214 0.0489368252464583 -0.0906666666666667 -0.265666666666667 5.68814008905809 17.5278036279433 -0.0906666666666667 -0.265666666666667 0.269889501462734 0.0176693119080391 -1.228802672667 -3.36466034461019 A0A0J9YWL0 NotFound A0A0J9YWL0.S737.p_NotFound A0A0J9YWL0_S737s_1_1_737_737 A0A0J9YWL0 A0A0J9YWL0|Q9Y4K1 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17045.17619.3 16.81 16.81 11.082 1 1 1 0 760.4324 2198.3298 S737s N740n TMT10 732 (K) KVMPNsPQnGVLVK (E) KVMPN(0.0)S(1.0)PQN(0.99)GVLVK K:TMT10,s:Phosphorylated S,n:Deamidated CRYBG1 233643.7 17 19 79.1 640.71 HUMAN 1 -5.6881 -17.5278 EKKVRPFSMFDAVDQ-p Q13625-3;S464-p EKKVRPFSMFDAVDQ 0.16127524660131 0.167325435440583 0.283333333333333 0.152 15.8657427221249 10.2134168383655 0.283333333333333 0.152 0.0259075131812612 0.0952046840627427 3.0424537121025 2.01797810357731 Q13625 TP53BP2 Q13625.3.S464.p_TP53BP2 Q13625-3_S464s_1_1_464_464 Q13625-3 Q13625-3|Q13625-2 Isoform 3 of Apoptosis-stimulating of p53 protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27154.27154.4 18.6 15.42 7.199 4 1 1 0 802.41 3125.6606 S464s N473n TMT10 459 (K) KVRPFsMFDAVDQSnAPPSFGTLR (K) KVRPFS(0.99)MFDAVDQS(0.0)N(1.0)APPS(0.0)FGT(0.0)LR K:TMT10,s:Phosphorylated S,n:Deamidated TP53BP2 127005.7 3 5 834.1 215.28 HUMAN 1 15.8657 10.2134 EKLAEKKSPQEPTPS-p P28324;S180-p EKLAEKKSPQEPTPS 0.181080338359562 0.31469317777803 -0.231 0.125333333333333 14.6285175718672 6.63656929236737 -0.231 0.125333333333333 0.0344467491814446 0.216941715838906 -2.80906534465323 1.39686822389872 P28324 ELK4 P28324.S180.p_ELK4 P28324_S180s _1_1_180_180 P28324 P28324|P28324-2 ETS domain-containing protein Elk-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13392.13392.3 13.26 13.26 4.29 3 1 1 0 693.3999 1998.2202 S180s TMT10 179 (K) KsPQEPTPSVIK (F) KS(0.99)PQEPT(0.0)PS(0.0)VIK K:TMT10,s:Phosphorylated S ELK4 47012.7 2 1 2359.1 86.57 HUMAN 1 -14.6285 6.6366 EKLASMESPEEPGAS-p A0A075B6T4;S28-p EKLASMESPEEPGAS 0.952986039794177 0.232169074630934 0.00899999999999999 0.159 0.412558814074011 8.35408259989027 0.00899999999999999 0.159 0.909377319905218 0.146080329574476 0.119252842972118 1.6959727710421 A0A075B6T4 NotFound A0A075B6T4.S28.p_NotFound A0A075B6T4_S28s _1_1_28_28 A0A075B6T4 A0A075B6T4|Q9NVX7-2|E9PQ38 Kelch repeat and BTB domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.31831.31831.4 20.4 20.4 3.232 6 1 1 0 849.3878 3314.5638 S28s TMT10 23 (K) LASMEsPEEPGASMDENYFVNYTFK (D) LAS(0.0)MES(0.99)PEEPGAS(0.0)MDENY(0.0)FVNY(0.0)T(0.0)FK K:TMT10,s:Phosphorylated S KBTBD4 62035.1 3 1 4219.1 35.18 HUMAN 1 0.4126 8.3541 EKLATKSSPVKVGEK-p P49916;S913-p EKLATKSSPVKVGEK 0.0683636000573323 0.00137406073843988 0.674666666666667 -1.62133333333333 25.1389412191928 46.452763446574 0.674666666666667 -1.62133333333333 0.00306271001083264 2.26320375673182e-05 5.07905260747411 -13.4526132082903 P49916 LIG3 P49916.S913.p_LIG3 P49916_S913s _1_1_913_913 P49916 P49916|P49916-2|P49916-3|P49916-4 DNA ligase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10562.10760.3 9.45 3.39 1.33 3 1 1 0 566.677 1618.0507 S913s TMT10 908 (K) LATKSsPVK (V) LAT(0.0)KS(0.0)S(0.99)PVK K:TMT10,s:Phosphorylated S LIG3 114388.3 11 8 649.1 254.3 HUMAN 1 25.1389 -46.4528 EKLDQPVSAPPSPRD-p Q16204;S240-p EKLDQPVSAPPSPRD 0.426803441181002 0.159557065775318 -0.137 -0.234666666666667 6.81078909044023 10.483553465166 -0.137 -0.234666666666667 0.208411217637278 0.0894632463769138 -1.42785047950668 -2.06497895002882 Q16204 CCDC6 Q16204.S240.p_CCDC6 Q16204_S240s _1_1_240_240 Q16204 Q16204 Coiled-coil domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12556.12780.3 11.66 11.66 5.72 2 1 1 0 524.938 1492.8321 S240s TMT10 235 (K) LDQPVsAPPSPR (D) LDQPVS(0.99)APPS(0.0)PR s:Phosphorylated S CCDC6 53461.2 5 4 423.1 319.68 HUMAN 1 -6.8108 -10.4836 EKLEAQDSGEEARNL-p Q8WYP5-2;S1568-p EKLEAQDSGEEARNL 0.872416683091892 0.768942344155265 0.0256666666666667 -0.0506666666666667 1.16009966575554 1.57758868743677 0.0256666666666667 -0.0506666666666667 0.765579037521842 0.695410319778902 0.313569263532801 -0.413037379486465 Q8WYP5 AHCTF1 Q8WYP5.2.S1568.p_AHCTF1 Q8WYP5-2_S1568s _1_1_1568_1568 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25272.25272.5 25.5 25.5 9.926 5 1 1 0 1051.7301 5174.6472 S1568s TMT10 1534 (K) ESVDLPEEKLPISDSPPDTQEIHVIEQEKLEAQDsGEEAR (N) ES(0.0)VDLPEEKLPIS(0.0)DS(0.0)PPDT(0.0)QEIHVIEQEKLEAQDS(0.99)GEEAR K:TMT10,s:Phosphorylated S AHCTF1 258049.6 2 25 40.1 829.79 HUMAN 1 1.1601 -1.5776 EKLERVPSPDHRRRS-p Q8NAV1;S209-p EKLERVPSPDHRRRS 0.950174393059231 0.884700569219726 0.00999999999999999 0.0353333333333333 0.439661883335904 0.748569581473763 0.01 0.0353333333333333 0.903719829403149 0.841672314272111 0.126743611305886 0.209543473527221 Q8NAV1 PRPF38A Q8NAV1.S209.p_PRPF38A Q8NAV1_S209s _1_1_209_209 Q8NAV1 Q8NAV1|Q8NAV1-2 Pre-mRNA-splicing factor 38A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6415.6415.3 9.31 9.31 99 1 1 1 0 505.5946 1434.8015 S209s TMT10 204 (K) LERVPsPDHR (R) LERVPS(1.0)PDHR s:Phosphorylated S PRPF38A 37704.1 6 1 1570.1 130.77 HUMAN 1 0.4397 0.7486 EKLFPHVTPKGINGI-p Q9Y5P4;T232-p EKLFPHVTPKGINGI 0.366525683885644 0.041942329830693 -0.192333333333333 -0.269666666666667 8.09117548101373 18.4580793573962 -0.192333333333333 -0.269666666666667 0.155196689075326 0.0142623819986929 -1.65097351546321 -3.55257013657979 Q9Y5P4 COL4A3BP Q9Y5P4.T232.p_COL4A3BP Q9Y5P4_T232t _1_1_232_232 Q9Y5P4 Q9Y5P4-3|Q9Y5P4-2 Collagen type IV alpha-3-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18381.18381.3 12.28 12.28 99 1 1 1 0 492.9515 1396.8717 T232t TMT10 227 (K) LFPHVtPK (G) LFPHVT(1.0)PK K:TMT10,t:Phosphorylated T COL4A3BP 71518.3 1 4 1173.1 170.04 HUMAN 1 -8.0912 -18.4581 EKLFQGYSFVAPSIL-p O75582;S376-p EKLFQGYSFVAPSIL 0.0394708703166875 0.336036140909387 -1.00066666666667 -0.212 31.6041201443841 6.27543659354165 -1.00066666666667 -0.212 0.000691174943285546 0.235752518350762 -6.93542175353624 -1.33315470181001 O75582 RPS6KA5 O75582.S376.p_RPS6KA5 O75582_S376s _1_1_376_376 O75582 O75582|O75582-3|O75582-2 Ribosomal protein S6 kinase alpha-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.37044.37044.3 16.43 16.43 6.162 3 1 1 0 752.4139 2175.2618 S376s TMT10 371 (K) LFQGYsFVAPSILFK (R) LFQGY(0.0)S(0.99)FVAPS(0.0)ILFK K:TMT10,s:Phosphorylated S RPS6KA5 90434.3 3 4 2444.1 83.26 HUMAN 1 -31.6041 -6.2754 EKLFRSQSADAPGPT-p Q9NSC5;S159-p EKLFRSQSADAPGPT 0.472422836600032 0.0367597620309433 -0.183333333333333 0.288666666666667 6.00372598090005 19.2988870332466 -0.183333333333333 0.288666666666667 0.250973231084338 0.0117519868459656 -1.28522731644815 3.72674105300111 Q9NSC5 HOMER3 Q9NSC5.S159.p_HOMER3 Q9NSC5_S159s _1_1_159_159 Q9NSC5 Q9NSC5|Q9NSC5-2|Q9NSC5-5 Homer protein homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5145.5145.2 14.17 14.17 2.504 3 1 1 0 762.849 1444.723 S159s TMT10 157 (R) SQsADAPGPTER (E) S(0.0)QS(0.99)ADAPGPT(0.0)ER s:Phosphorylated S HOMER3 39835.6 1 2 1577.1 130.16 HUMAN 1 -6.0037 19.2989 EKLGGKLTGTANKAS-p P09874;T420-p EKLGGKLTGTANKAS 0.981729293547166 0.0207860619324739 -0.00400000000000001 -0.554333333333333 0.158677604551793 23.0066011718694 -0.00400000000000001 -0.554333333333333 0.964122547312195 0.00500426019723507 -0.0471005920420435 -4.55088925802459 P09874 PARP1 P09874.T420.p_PARP1 P09874_T420t _1_1_420_420 P09874 P09874 Poly [ADP-ribose] polymerase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13107.13107.3 8.79 8.79 8.788 2 1 1 0 609.696 1747.1045 T420t TMT10 415 (K) LGGKLtGTANK (A) LGGKLT(0.99)GT(0.0)ANK K:TMT10,t:Phosphorylated T PARP1 113880.5 1 5 1179.1 169.18 HUMAN 1 -0.1587 -23.0066 EKLKESISPEARRKR-p Q9NTX9;S53-p EKLKESISPEARRKR 0.289516646922983 0.0421918828246993 0.162 -0.305666666666667 10.1499616156011 18.415655104609 0.162 -0.305666666666667 0.0966059417308339 0.0144023874333588 2.00777638175405 -3.5438936509175 Q9NTX9 FAM217B Q9NTX9.S53.p_FAM217B Q9NTX9_S53s _1_1_53_53 Q9NTX9 Q9NTX9 Protein FAM217B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11474.11474.3 10.32 6.69 3.098 2 1 1 0 556.6428 1587.947 S53s TMT10 48 (K) LKESIsPEAR (R) LKES(0.0)IS(0.99)PEAR K:TMT10,s:Phosphorylated S FAM217B 42336 1 1 6655.1 10.32 HUMAN 1 10.15 -18.4157 EKLKGKGSPRPQAPK-p Q14978-3;S539-p EKLKGKGSPRPQAPK 0.84188135460535 0.0825034265802481 -0.0303333333333333 -0.195333333333333 1.4461216877441 14.3524538157395 -0.0303333333333334 -0.194301206285216 0.716783222227866 0.0367074840221995 -0.382320743129838 -2.75615836379116 Q14978 NOLC1 Q14978.3.S539.p_NOLC1 Q14978-3_S539s_1_1_539_539 Q14978-3 Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10680.10680.5 20.5 20.5 5.862 4 1 1 0 761.644 3723.2366 S539s N548n TMT10 534 (K) LKGKGsPRPQAPKAnGTSALTAQNGK (A) LKGKGS(0.99)PRPQAPKAN(0.99)GT(0.0)S(0.0)ALT(0.0)AQN(0.0)GK K:TMT10,s:Phosphorylated S,n:Deamidated NOLC1 73744 74 13 72.1 655.55 HUMAN 1 -1.4461 -14.3525 EKLKLGCSPANGNST-p Q9NZJ9-2;S149-p EKLKLGCSPANGNST 0.892038191192908 0.0746300329356068 -0.0203333333333333 -0.232666666666667 0.970801265206453 14.9587030501381 -0.0203333333333333 -0.232666666666667 0.799686700693243 0.0319249109832087 -0.266538109792323 -2.86884375685517 Q9NZJ9 NUDT4 Q9NZJ9.2.S149.p_NUDT4 Q9NZJ9-2_S149s _1_1_149_149 Q9NZJ9-2 Q9NZJ9-2|Q9NZJ9-3|A0A0C4DGJ4 Isoform 2 of Diphosphoinositol polyphosphate phosphohydrolase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29821.29821.4 23.15 23.15 2.276 9 1 1 0 1095.5663 4299.2807 S149s TMT10 144 (K) LKLGCsPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR (-) LKLGCS(0.99)PANGNS(0.0)T(0.0)VPS(0.0)LPDNNALFVT(0.0)AAQT(0.0)S(0.0)GLPS(0.0)S(0.0)VR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NUDT4 20662 7 1 3810.1 42.64 HUMAN 1 -0.9708 -14.9587 EKLKTPSTPVACSTP-p Q6PL18;T1152-p EKLKTPSTPVACSTP 0.678509463782639 0.0010212605030329 -0.0556666666666667 -1.237 3.15248527009545 51.4968351856158 -0.0556666666666667 -1.237 0.483895376987794 7.08461870508699e-06 -0.751217201992718 -16.7410464763284 Q6PL18 ATAD2 Q6PL18.T1152.p_ATAD2 Q6PL18_T1152t _1_1_1152_1152 Q6PL18 Q6PL18|A0A0B4J211 ATPase family AAA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15482.15482.2 13.66 9.09 1.105 5 1 1 0 1048.5474 2016.12 T1152t TMT10 1149 (K) TPStPVACSTPAQLK (R) T(0.0)PS(0.0)T(0.99)PVACS(0.0)T(0.0)PAQLK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ATAD2 159920.6 7 15 266.1 395.28 HUMAN 1 -3.1525 -51.4968 EKLLLDDSFETKKTP-p O00443;S108-p EKLLLDDSFETKKTP 0.147946322560902 0.00295286178234935 -0.504666666666667 -0.738 16.8364381618022 38.1422717866398 -0.504666666666667 -0.738 0.0207183985828928 0.000153381443733338 -3.23048892755296 -9.32637556690055 O00443 PIK3C2A O00443.S108.p_PIK3C2A O00443_S108s _1_1_108_108 O00443 O00443|O00443-2|A0A0C4DGF9 Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27007.27007.2 14.16 14.16 3.594 2 1 1 0 859.9538 1638.9355 S108s TMT10 103 (K) LLLDDsFETK (K) LLLDDS(0.99)FET(0.0)K K:TMT10,s:Phosphorylated S PIK3C2A 192273.6 2 1 2829.1 68.79 HUMAN 1 -16.8364 -38.1423 EKLMEKHSQEARQAD-p Q96N06-2;S36-p EKLMEKHSQEARQAD 0.412161436237322 0.0092292356544658 -0.2 -0.791 7.09847521468457 28.7547268520773 -0.2 -0.791 0.195052930023596 0.00133207081978456 -1.4782400092423 -6.05293966818137 Q96N06 SPATA33 Q96N06.2.S36.p_SPATA33 Q96N06-2_S36s _1_1_36_36 Q96N06-2 Q96N06-2 Isoform 2 of Spermatogenesis-associated protein 33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.6138.6138.3 12.64 6.09 99 1 1 1 0 589.6395 1686.9361 S36s TMT10 31 (K) LMEKHsQEAR (Q) LMEKHS(1.0)QEAR K:TMT10,s:Phosphorylated S SPATA33 15699.3 2 1 3220.1 56.96 HUMAN 1 -7.0985 -28.7547 EKLNPYPTPSPPHPL-p Q5JTD0;T318-p EKLNPYPTPSPPHPL 0.387294866385672 0.412704355860616 0.165333333333333 -0.0906666666666666 7.61946126124337 5.11201587650154 0.165333333333333 -0.0906666666666666 0.173003095483114 0.308175715061261 1.56906885308177 -1.12431494873325 Q5JTD0 TJAP1 Q5JTD0.T318.p_TJAP1 Q5JTD0_T318tS320s_2_2_318_320 Q5JTD0 Q5JTD0|Q5JTD0-2|Q5JTD0-4 Tight junction-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21306.21306.3 11.99 11.99 2.999 4 2 2 0 764.7003 2132.149 T318t S320s TMT10 313 (K) LNPYPtPsPPHPLYPGR (R) LNPY(0.0)PT(0.99)PS(0.99)PPHPLY(0.0)PGR t:Phosphorylated T,s:Phosphorylated S TJAP1 62162.4 1 11 1364.1 149.81 HUMAN 1 7.6195 -5.112 EKLNRSNSELEDEIL-p Q96PC5;S747-p EKLNRSNSELEDEIL 0.437144947936803 0.198368386772219 0.104333333333333 0.137666666666667 6.61923675144534 9.24388337514155 0.104333333333333 0.137666666666667 0.217809252644501 0.119017729913649 1.39418378060135 1.84990350291091 Q96PC5 MIA2 Q96PC5.S747.p_MIA2 Q96PC5_S747s _1_1_747_747 Q96PC5 Q96PC5|G3V599|O15320-5|O15320-10|A4D2H0|Q8IX94|Q86UF2|P0CG41|A4FU28|O15320-3|O15320-4|O15320-2|O15320-7|O15320-6|O15320-8|O15320-9 Melanoma inhibitory activity protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30010.30010.4 16.07 11.68 1.103 2 1 1 0 555.0263 2137.1099 S747s TMT10 745 (R) SNsELEDEILCLEK (E) S(0.0)NS(0.99)ELEDEILCLEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MIA2 160460.4 11 2 569.1 269.96 HUMAN 1 6.6192 9.2439 EKLPGKMSPKHDGLG-p Q5CZA5;S155-p EKLPGKMSPKHDGLG 0.796355922071817 0.00885809255924247 -0.0563333333333333 0.469666666666667 1.90673789760664 29.0904467466066 -0.0563333333333333 0.469666666666667 0.644653300099248 0.00123297799370188 -0.488047970910938 6.15073062183928 Q5CZA5 ZNF805 Q5CZA5.S155.p_ZNF805 Q5CZA5_S155s _1_1_155_155 Q5CZA5 Q5CZA5|Q5CZA5-2 Zinc finger protein 805 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11726.11726.5 11.33 11.33 2.373 4 1 1 0 694.1731 3386.8694 S155s TMT10 148 (K) EKLPGKMsPKHDGLGTADSVCSR (I) EKLPGKMS(0.99)PKHDGLGT(0.0)ADS(0.0)VCS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF805 73138.9 4 72 240.31 415.72 HUMAN 1 -1.9067 29.0904 EKLPISDSPPDTQEI-p Q8WYP5-2;S1548-p EKLPISDSPPDTQEI 0.711022885496465 0.463300601358958 -0.0766666666666667 0.0986666666666667 2.78621123021162 4.45570082633487 -0.0766666666666667 0.0986666666666666 0.526476362231874 0.358451099915286 -0.676644503112568 1.00311054420618 Q8WYP5 AHCTF1 Q8WYP5.2.S1548.p_AHCTF1 Q8WYP5-2_S1548s _1_1_1548_1548 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25961.25961.5 21.81 16.47 1.262 5 1 1 0 1051.7275 5174.6472 S1548s TMT10 1534 (K) ESVDLPEEKLPISDsPPDTQEIHVIEQEKLEAQDSGEEAR (N) ES(0.0)VDLPEEKLPIS(0.0)DS(0.99)PPDT(0.0)QEIHVIEQEKLEAQDS(0.0)GEEAR K:TMT10,s:Phosphorylated S AHCTF1 258049.6 3 24 40.1 829.79 HUMAN 1 -2.7862 4.4557 EKLPTELSKEEPSTK-p P38432;S280-p EKLPTELSKEEPSTK 0.507195047903141 0.00441986327131149 0.0913333333333333 -0.551 5.43865270153239 34.5935797936291 0.0913333333333333 -0.551 0.285847718245821 0.000347249813081901 1.1838707628978 -7.94578834514124 P38432 COIL P38432.S280.p_COIL P38432_S280s _1_1_280_280 P38432 P38432 Coilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13893.13893.5 7.96 7.96 2.381 6 1 1 0 600.9313 2920.6649 S280s TMT10 270 (R) NSSEKLPTELsKEEPSTK (N) NS(0.0)S(0.0)EKLPT(0.0)ELS(0.99)KEEPS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S COIL 63291.8 2 10 395.1 330.42 HUMAN 1 5.4387 -34.5936 EKLQLHESQKDYKTG-p Q14247;S261-p EKLQLHESQKDYKTG 0.180434994668062 0.0240306897598365 -0.421666666666667 -0.614333333333333 14.671264074025 22.0715768950465 -0.421666666666667 -0.614333333333333 0.0341093617167528 0.00620643641639457 -2.81702084715833 -4.33371432814419 Q14247 CTTN Q14247.S261.p_CTTN Q14247_S261s _1_1_261_261 Q14247 Q14247 Src substrate cortactin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12531.12531.4 15.87 15.87 8.268 2 1 1 0 539.7985 2076.2057 S261s TMT10 256 (K) LQLHEsQKDYK (T) LQLHES(0.99)QKDY(0.0)K K:TMT10,s:Phosphorylated S CTTN 61756.2 11 5 493.1 293.68 HUMAN 1 -14.6713 -22.0716 EKLQLHESQKDYSKG-p Q14247-2;S261-p EKLQLHESQKDYSKG 0.165930854817255 0.00636741490360708 -0.386333333333333 -0.866666666666667 15.6032547043298 31.613107409322 -0.386333333333333 -0.866666666666667 0.0275216539323226 0.000689746108768723 -2.99237640579139 -6.92656621656878 Q14247 CTTN Q14247.2.S261.p_CTTN Q14247-2_S261s _1_1_261_261 Q14247-2 Q14247-2|Q14247-3 Isoform 2 of Src substrate cortactin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12205.12205.4 15.82 15.82 3.964 3 1 1 0 561.5576 2163.2377 S261s TMT10 256 (K) LQLHEsQKDYSK (G) LQLHES(0.99)QKDY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CTTN 71641.9 1 16 493.2 293.68 HUMAN 1 -15.6033 -31.6131 EKLQSFDSPERKRIK-p P78332;S1025-p EKLQSFDSPERKRIK 0.295408715152096 0.265693452659732 0.226333333333333 -0.335 9.97179695833124 7.57945211420171 0.226333333333333 -0.335 0.100651512200577 0.174604241164835 1.97681102733078 -1.56164168656335 P78332 RBM6 P78332.S1025.p_RBM6 P78332_S1025s _1_1_1025_1025 P78332 P78332|E9PGM9|P78332-2 RNA-binding protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12708.12708.2 11.97 6.44 3.192 2 1 1 0 872.9559 1664.9372 S1025s TMT10 1020 (K) LQSFDsPERK (R) LQS(0.0)FDS(0.99)PERK K:TMT10,s:Phosphorylated S RBM6 129269.2 11 5 1383.1 148.19 HUMAN 1 9.9718 -7.5795 EKLSHRPSDPGKSKG-p A0A0B4J291;S94-p EKLSHRPSDPGKSKG 0.976111830837964 0.0566309262080818 -0.00466666666666668 -0.330333333333333 0.205352145303238 16.6177511727844 -0.00466666666666668 -0.330333333333333 0.953816400025279 0.0217883770774363 -0.0606481606974936 -3.18536286341323 A0A0B4J291 NotFound A0A0B4J291.S94.p_NotFound A0A0B4J291_S94s _1_1_94_94 A0A0B4J291 A0A0B4J291|Q8N8U2 Chromodomain Y-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5338.5338.3 7.38 7.38 2.887 2 1 1 0 544.6261 1551.9007 S94s TMT10 89 (K) LSHRPsDPGK (S) LS(0.0)HRPS(0.99)DPGK K:TMT10,s:Phosphorylated S CDYL2 57241.1 1 2 4848.1 25.91 HUMAN 1 -0.2054 -16.6178 EKLSQRLSELDWMLK-p Q96GE4;S380-p EKLSQRLSELDWMLK 0.585434871518719 0.182405784836399 0.072 -0.15 4.27655868717592 9.72082591381614 0.072 -0.15 0.373546035280794 0.106639330200247 0.969638506099417 -1.93248956798053 Q96GE4 CEP95 Q96GE4.S380.p_CEP95 Q96GE4_S380s _1_1_380_380 Q96GE4 Q96GE4|A0A0A0MTQ1|Q96GE4-2 Centrosomal protein of 95 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30611.30611.3 11.67 7.29 1.204 2 1 1 0 719.723 2077.188 S380s TMT10 375 (K) LSQRLsELDWMLK (S) LS(0.0)QRLS(0.99)ELDWMLK K:TMT10,s:Phosphorylated S CEP95 95922.6 1 3 2407.1 84.85 HUMAN 1 4.2766 -9.7208 EKMAEGGSGDVDDAG-p Q9UH62;S43-p EKMAEGGSGDVDDAG 0.175358480804402 0.0225627720052641 -0.278 -0.481666666666667 15.0473851082556 22.4892027819021 -0.278 -0.481666666666667 0.0312796214962737 0.00563741130174156 -2.88734302277694 -4.42988370684866 Q9UH62 ARMCX3 Q9UH62.S43.p_ARMCX3 Q9UH62_S43s _1_1_43_43 Q9UH62 Q9UH62 Armadillo repeat-containing X-linked protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7680.7680.2 20.53 20.53 8.884 2 1 1 0 1068.4153 2055.8545 S43s TMT10 38 (K) MAEGGsGDVDDAGDCSGAR (Y) MAEGGS(0.99)GDVDDAGDCS(0.0)GAR C:Carbamidomethylation,s:Phosphorylated S ARMCX3 42842.2 1 1 2535.1 79.58 HUMAN 1 -15.0474 -22.4892 EKMDLSASLGEKDKD-p G3V1S3;S511-p EKMDLSASLGEKDKD 0.050054490215346 0.581709204814176 -0.593666666666667 -0.105666666666667 28.7210493677395 3.17635227687814 -0.593666666666667 -0.105666666666667 0.0013424405536051 0.481243384348121 -6.05224260649285 -0.755899646293822 G3V1S3 DENND5B G3V1S3.S511.p_DENND5B G3V1S3_S511s _1_1_511_511 G3V1S3 Q6ZUT9-2|G3V1S3|Q6ZUT9-4|Q6ZUT9-3 DENN domain-containing protein 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19664.19664.3 8.16 8.16 2.868 2 1 1 0 530.2739 1508.8395 S511s TMT10 506 (K) MDLSAsLGEK (D) MDLS(0.0)AS(0.99)LGEK K:TMT10,s:Phosphorylated S DENND5B 150883.3 1 1 3394.1 52.14 HUMAN 1 -28.721 -3.1764 EKMLAAKSADGSAPA-p Q01650;S31-p EKMLAAKSADGSAPA 0.820904102287946 0.888045750838673 -0.0463333333333333 0.0263333333333333 1.6486415094847 0.724855904369741 -0.0463333333333333 0.0263333333333333 0.684125611043611 0.846280647294407 -0.429504376207713 0.203342810882788 Q01650 SLC7A5 Q01650.S31.p_SLC7A5 Q01650_S31s _1_1_31_31 Q01650 Q01650 Large neutral amino acids transporter small subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10702.10702.2 13.74 13.74 3.682 3 1 1 0 1005.9698 1930.9668 S31s TMT10 31 (K) sADGSAPAGEGEGVTLQR (N) S(0.99)ADGS(0.0)APAGEGEGVT(0.0)LQR s:Phosphorylated S SLC7A5 55693.8 2 1 4366.1 32.66 HUMAN 1 -1.6486 0.7249 EKMPRGGSLESDGCP-p P51608-2;S435-p EKMPRGGSLESDGCP 0.686809970522272 0.224422772864958 -0.0603333333333333 0.124333333333333 3.06208570196799 8.54621073880353 -0.0603333333333333 0.124333333333333 0.494073350964923 0.139758723756762 -0.732994637321791 1.7292199025334 P51608 MECP2 P51608.2.S435.p_MECP2 P51608-2_S435s _1_1_435_435 P51608-2 P51608-2 Isoform B of Methyl-CpG-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9823.9823.3 10.96 10.96 3.245 2 1 1 0 767.0591 2219.1945 S435s TMT10 433 (R) GGsLESDGCPKEPAK (T) GGS(0.99)LES(0.0)DGCPKEPAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MECP2 53493.6 1 6 1786.1 114.94 HUMAN 1 -3.0621 8.5462 EKMSGSASSENREGT-p O43493;S351-p EKMSGSASSENREGT 0.650589792904621 0.713845955954058 -0.198333333333333 -0.123666666666667 3.50156679738543 2.01553961958177 -0.198333333333333 -0.123666666666667 0.446522471877864 0.628703731568344 -0.820568198206051 -0.512181019949086 O43493 TGOLN2 O43493.S351.p_TGOLN2 O43493_S351s _1_1_351_351 O43493 O43493|F8W8W7 Trans-Golgi network integral membrane protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4307.4307.2 11.57 7.51 1.146 4 1 1 0 667.7843 1254.5946 S351s TMT10 346 (K) MSGSAsSENR (E) MS(0.0)GS(0.0)AS(0.99)S(0.0)ENR s:Phosphorylated S TGOLN2 51111.9 3 5 1252.1 161.84 HUMAN 1 -3.5016 -2.0155 EKNDNGASGQTSESI-p Q9NWH9;S533-p EKNDNGASGQTSESI 0.477468266229797 0.0492018440958326 -0.146333333333333 0.289666666666667 5.90582889115435 17.4963459924303 -0.146333333333333 0.289666666666667 0.256694823555633 0.0177977622406666 -1.26776958124202 3.3583899483613 Q9NWH9 SLTM Q9NWH9.S533.p_SLTM Q9NWH9_S533s_1_1_533_533 Q9NWH9 Q9NWH9|Q9NWH9-3 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10185.10185.4 8.18 8.18 1.114 4 1 1 0 891.232 3480.9518 N530n S533s TMT10 520 (K) KIEGKDEKNDnGAsGQTSESIK (K) KIEGKDEKN(0.0)DN(0.99)GAS(0.99)GQT(0.0)S(0.0)ES(0.0)IK K:TMT10,n:Deamidated,s:Phosphorylated S SLTM 117431.6 4 10 167.1 494.15 HUMAN 1 -5.9058 17.4963 EKNEGSESAPEGQAQ-p P67809;S176-p EKNEGSESAPEGQAQ 0.331321380439187 0.0505413876876761 -0.375 0.401 8.96233670856391 17.3196476535616 -0.375 0.401 0.126989066046328 0.0185368200795493 -1.80184303083089 3.32326766954601 P67809 YBX1 P67809.S176.p_YBX1 P67809_S176s _1_1_176_176 P67809 P67809 Nuclease-sensitive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3879.3879.2 17.43 17.43 2.519 2 1 1 0 948.9186 1816.8623 S176s TMT10 171 (K) NEGSEsAPEGQAQQR (R) NEGS(0.0)ES(0.99)APEGQAQQR s:Phosphorylated S YBX1 35923.5 2 14 929.2 199.34 HUMAN 1 -8.9623 17.3196 EKNHTVVSPRALELS-p A0A087WXL3;S1722-p EKNHTVVSPRALELS 0.922345826324192 0.0042417883900573 0.0166666666666667 -0.707333333333333 0.687903691855271 34.8832200464176 0.0166666666666667 -0.707333333333333 0.853511998689324 0.000324846352990111 0.193649540073658 -8.051321316525 A0A087WXL3 NotFound A0A087WXL3.S1722.p_NotFound A0A087WXL3_S1722s _1_1_1722_1722 A0A087WXL3 A0A087WXL3|O75417|O75417-2 DNA polymerase theta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4210.4210.2 13.4 8.33 3.556 2 1 1 0 609.8138 1138.653 S1722s TMT10 1717 (K) NHTVVsPR (A) NHT(0.0)VVS(0.99)PR s:Phosphorylated S POLQ 308477.9 2 3 4146.1 36.71 HUMAN 1 0.6879 -34.8832 EKNPRESTGNMVTGQ-p Q15021;T586-p EKNPRESTGNMVTGQ 0.827997063487557 0.440897459608939 0.0526666666666667 0.117333333333333 1.57495756749334 4.73708033162548 0.0526666666666667 0.117333333333333 0.695831753253774 0.335963399305193 0.412471058549979 1.05544483536691 Q15021 NCAPD2 Q15021.T586.p_NCAPD2 Q15021_S585sT586tT591t_3_3_585_591 Q15021 Q15021 Condensin complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7137.7137.4 8.55 1.68 1.246 6 3 3 0 1048.9713 3950.9726 S585s T586t T591t N598n N601n TMT10 581 (K) NPREstGNMVtGQTVCKnKPnMSDPEESR (G) N(0.0)PRES(0.99)T(0.99)GN(0.0)MVT(0.99)GQT(0.0)VCKN(0.99)KPN(0.99)MS(0.0)DPEES(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated NCAPD2 158605.7 1 11 1192.1 168.06 HUMAN 1 1.575 4.7371 EKNQWQLSADDLKKL-p P09543;S170-p EKNQWQLSADDLKKL 0.938934823415151 0.0287364140753234 0.0133333333333333 -0.303333333333333 0.535082986909309 20.8734013786275 0.0133333333333333 -0.303333333333333 0.884080275642395 0.00817824020438066 0.152815829063606 -4.06493210996227 P09543 CNP P09543.S170.p_CNP P09543_S170s _1_1_170_170 P09543 P09543|P09543-2 2',3'-cyclic-nucleotide 3'-phosphodiesterase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21582.21582.2 16.11 13.96 99 1 1 1 0 928.4728 1775.9692 S170s TMT10 165 (K) NQWQLsADDLK (K) NQWQLS(1.0)ADDLK K:TMT10,s:Phosphorylated S CNP 47977.1 8 2 2334.1 87.42 HUMAN 1 0.5351 -20.8734 EKNSVPLSDALLNKL-p P33981;S80-p EKNSVPLSDALLNKL 0.928566654452394 0.0611577392097233 0.025 -0.223666666666667 0.638928192645156 16.1610375780748 0.025 -0.223666666666667 0.863191550910595 0.0242045070491685 0.180682022844956 -3.09695690111007 P33981 TTK P33981.S80.p_TTK P33981_S80s _1_1_80_80 P33981 P33981|P33981-2 Dual specificity protein kinase TTK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23271.23271.3 7.39 7.39 7.385 2 1 1 0 603.6705 1729.026 S80s TMT10 75 (K) NSVPLsDALLNK (L) NS(0.0)VPLS(0.99)DALLNK K:TMT10,s:Phosphorylated S TTK 98040.5 1 4 1204.1 166.9 HUMAN 1 0.6389 -16.161 EKNVASPSRIQQIIE-p O60313-10;S535-p EKNVASPSRIQQIIE 0.136948588581255 0.0174864042819418 0.275666666666667 0.343333333333333 17.713554299537 24.2203183881654 0.275666666666667 0.343333333333333 0.0169295170859451 0.00378414841508584 3.40452448999071 4.84317870260719 O60313 OPA1 O60313.10.S535.p_OPA1 O60313-10_S535s _1_1_535_535 O60313-10 O60313-10|O60313-2|E5KLJ9|O60313-11|O60313-9 Isoform 4 of Dynamin-like 120 kDa protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24651.24651.3 12.98 12.98 1.445 2 1 1 0 726.7404 2098.2385 S535s TMT10 530 (K) NVASPsRIQQIIEGK (L) NVAS(0.0)PS(0.99)RIQQIIEGK K:TMT10,s:Phosphorylated S OPA1 118312 2 3 1733.1 118.69 HUMAN 1 17.7136 24.2203 EKNYALPSPATTEGG-p Q8N122;S696-p EKNYALPSPATTEGG 0.466344957628986 0.116672149591831 -0.102666666666667 -0.178333333333333 6.11643154744841 12.3055645044909 -0.102666666666667 -0.178333333333333 0.244543906293296 0.058808966812562 -1.30527845855998 -2.38542736358974 Q8N122 RPTOR Q8N122.S696.p_RPTOR Q8N122_S696s _1_1_696_696 Q8N122 Q8N122|Q8N122-3 Regulatory-associated protein of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17856.17856.3 12.19 7.67 1.8 8 1 1 0 1018.4939 2973.4938 S696s TMT10 691 (K) NYALPsPATTEGGSLTPVRDSPCTPR (L) NY(0.0)ALPS(0.99)PAT(0.0)T(0.0)EGGS(0.0)LT(0.0)PVRDS(0.0)PCT(0.0)PR C:Carbamidomethylation,s:Phosphorylated S RPTOR 150746.6 2 1 1778.1 115.46 HUMAN 1 -6.1164 -12.3056 EKNYYQDTPKQIRSK-p Q9Y3C1;T144-p EKNYYQDTPKQIRSK 0.466667919827382 0.00217711535126148 0.098 -0.872666666666667 6.1094033957454 41.3598072258722 0.098 -0.872666666666667 0.244939970062441 7.31171537920018e-05 1.30402953105486 -10.760219133878 Q9Y3C1 NOP16 Q9Y3C1.T144.p_NOP16 Q9Y3C1_T144t _1_1_144_144 Q9Y3C1 Q9Y3C1 Nucleolar protein 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9683.9683.3 11.17 5.97 3.496 3 1 1 0 655.3395 1884.038 T144t TMT10 139 (K) NYYQDtPKQIR (S) NY(0.0)Y(0.0)QDT(0.99)PKQIR K:TMT10,t:Phosphorylated T NOP16 21245 2 1 5251.1 21.33 HUMAN 1 6.1094 -41.3598 EKPDLAESPKESRSK-p Q9Y3A4;S99-p EKPDLAESPKESRSK 0.698085265142613 0.00817295899565865 0.0523333333333333 -0.434666666666667 2.93421714134858 29.7198032336665 0.0523333333333333 -0.434666666666667 0.50883653418372 0.00106664444672627 0.707019092829098 -6.33740214186955 Q9Y3A4 RRP7A Q9Y3A4.S99.p_RRP7A Q9Y3A4_S99s _1_1_99_99 Q9Y3A4 Q9Y3A4 Ribosomal RNA-processing protein 7 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26228.26228.4 18.31 18.31 2.511 5 1 1 0 946.0072 3701.0398 S99s TMT10 78 (R) LLSTCGLVQSVELQEKPDLAEsPKESR (S) LLS(0.0)T(0.0)CGLVQS(0.0)VELQEKPDLAES(0.99)PKES(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RRP7A 32504.6 5 2 3825.1 42.42 HUMAN 1 2.9342 -29.7198 EKPEPERSPPNRKRP-p Q9NZ63;S261-p EKPEPERSPPNRKRP 0.876829736197143 0.455743916499935 0.028 -0.100666666666667 1.12153787551975 4.55077906072987 0.028 -0.100666666666667 0.772407020443306 0.35068895984368 0.304093089266697 -1.02086160241334 Q9NZ63 C9orf78 Q9NZ63.S261.p_C9orf78 Q9NZ63_S261s _1_1_261_261 Q9NZ63 Q9NZ63 Telomere length and silencing protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6360.6564.4 15.66 15.66 6.619 2 1 1 0 587.3029 2266.2192 S261s TMT10 250 (R) VGDTEKPEPERsPPNR (K) VGDT(0.0)EKPEPERS(0.99)PPNR K:TMT10,s:Phosphorylated S C9orf78 33744.5 16 3 987.1 191.91 HUMAN 1 1.1215 -4.5508 EKPEREKTPSEDKLS-p Q8NFC6;T733-p EKPEREKTPSEDKLS 0.143979024813497 0.16918155714087 -0.321 0.306 17.1856388341908 10.1487032642099 -0.321 0.306 0.019117720879655 0.0966339369827473 -3.29928784998022 2.00673240867418 Q8NFC6 BOD1L1 Q8NFC6.T733.p_BOD1L1 Q8NFC6_T733t _1_1_733_733 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4844.4844.5 8.31 3.81 2.202 2 1 1 0 514.6871 2489.4381 T733t TMT10 726 (K) EKPEREKtPSEDK (L) EKPEREKT(0.99)PS(0.0)EDK K:TMT10,t:Phosphorylated T BOD1L1 332628.7 2 8 97.1 603.4 HUMAN 1 -17.1856 10.1487 EKPHAGVSPRGVKRQ-p Q5VWQ0;S81-p EKPHAGVSPRGVKRQ 0.169763000955003 0.00550243943213285 -0.259333333333333 -0.571 15.3636600453865 32.775094969163 -0.259333333333333 -0.571 0.0290826512538177 0.000527825664449882 -2.94693827786675 -7.30992897973067 Q5VWQ0 RSBN1 Q5VWQ0.S81.p_RSBN1 Q5VWQ0_S81s _1_1_81_81 Q5VWQ0 Q5VWQ0|A0A087WWP8|Q5VWQ0-4|A0A0C4DH79 Lysine-specific demethylase 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4339.4339.4 16.02 16.02 99 1 1 1 0 404.7236 1535.9058 S81s TMT10 74 (K) EKPHAGVsPR (G) EKPHAGVS(1.0)PR K:TMT10,s:Phosphorylated S RSBN1 90983.5 4 1 2654.1 75.05 HUMAN 1 -15.3637 -32.7751 EKPKRPVSAMFIFSE-p P17480;S412-p EKPKRPVSAMFIFSE 0.794205360979352 0.132453744619697 0.0466666666666667 0.267666666666667 1.93212103590071 11.5713058404604 0.0466666666666667 0.267666666666667 0.640896494901488 0.0696417083326504 0.493716726265035 2.25544032716323 P17480 UBTF P17480.S412.p_UBTF P17480_S412s _1_1_412_412 P17480 P17480|E9PKP7|P17480-2 Nucleolar transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26285.26285.3 10.89 7.88 6.556 2 1 1 0 693.6945 1999.1087 S412s TMT10 409 (K) RPVsAMFIFSEEK (R) RPVS(0.99)AMFIFS(0.0)EEK K:TMT10,s:Phosphorylated S UBTF 89746.7 1 5 1312.1 155.17 HUMAN 1 1.9321 11.5713 EKPPAPPSLPAGPPG-p Q15428;S222-p EKPPAPPSLPAGPPG 0.551807010208202 0.315736442725645 -0.247666666666667 0.236 4.76527911389763 6.61486072587295 -0.247666666666667 0.236 0.333789052404986 0.218028831584612 -1.06086330740976 1.39304960064404 Q15428 SF3A2 Q15428.S222.p_SF3A2 Q15428_S222s _1_1_222_222 Q15428 Q15428 Splicing factor 3A subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20791.20791.4 17.32 14.88 99 1 1 1 0 635.1113 2457.4507 S222s TMT10 214 (K) MEKPPAPPsLPAGPPGVK (R) MEKPPAPPS(1.0)LPAGPPGVK K:TMT10,s:Phosphorylated S SF3A2 49368.8 1 3 4199.1 35.56 HUMAN 1 -4.7653 6.6149 EKPRKHDSGAADLER-p Q9NX55;S38-p EKPRKHDSGAADLER 0.033189687806579 0.00819640833915464 -1.036 -0.942333333333333 34.6708979475727 29.6852590209204 -1.036 -0.942333333333333 0.00034112237384425 0.00107516247388636 -7.9891386207635 -6.32704107739568 Q9NX55 HYPK Q9NX55.S38.p_HYPK Q9NX55_S38s _1_1_38_38 Q9NX55 Q9NX55|Q9NX55-3|J3QT56 Huntingtin-interacting protein K HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15808.15808.4 15.23 15.23 3.413 3 1 1 0 726.1212 2821.4935 S38s TMT10 35 (R) KHDsGAADLERVTDYAEEK (E) KHDS(0.99)GAADLERVT(0.0)DY(0.0)AEEK K:TMT10,s:Phosphorylated S HYPK 14665.2 1 1 5158.1 22.31 HUMAN 1 -34.6709 -29.6853 EKPRKRNSEDEAQEA-p A2RRP1;S1937-p EKPRKRNSEDEAQEA 0.696853109927181 0.152946298790604 -0.0933333333333333 0.157666666666667 2.94666003697412 10.7247571919576 -0.0933333333333334 0.157666666666667 0.507380761934053 0.0846299882941389 -0.709557371765388 2.10703339161252 A2RRP1 NBAS A2RRP1.S1937.p_NBAS A2RRP1_S1937s _1_1_1937_1937 A2RRP1 A2RRP1|A2RRP1-2 Neuroblastoma-amplified sequence HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4031.4031.3 12.3 12.3 99 1 1 1 0 724.7135 2092.1602 S1937s TMT10 1934 (R) KRNsEDEAQEAK (D) KRNS(1.0)EDEAQEAK K:TMT10,s:Phosphorylated S NBAS 271875.5 3 5 2447.1 83.13 HUMAN 1 -2.9467 10.7248 EKPTQSVSSPEATSG-p Q9BZ95;S560-p EKPTQSVSSPEATSG 0.984538976130522 0.117968492298336 0.00366666666666666 -0.165 0.136707697816069 12.2402718764237 0.00366666666666666 -0.165 0.96901216721102 0.059699791223425 0.0406768804469268 -2.37381358618129 Q9BZ95 WHSC1L1 Q9BZ95.S560.p_WHSC1L1 Q9BZ95_S560sS561s_2_2_560_561 Q9BZ95 Q9BZ95|Q9BZ95-5|Q9BZ95-2|Q9BZ95-4|Q9BZ95-3 Histone-lysine N-methyltransferase NSD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10915.10915.3 15.84 15.84 2.878 9 2 2 0 1052.1764 2994.5835 S560s S561s TMT10 552 (R) NEKPTQSVssPEATSGSTGSVEK (K) NEKPT(0.0)QS(0.0)VS(0.99)S(0.99)PEAT(0.0)S(0.0)GS(0.0)T(0.0)GS(0.0)VEK K:TMT10,s:Phosphorylated S NSD3 165432.8 4 10 1351.1 150.85 HUMAN 1 0.1367 -12.2403 EKQDLMQSLAKLQER-p Q6AWC2-6;S245-p EKQDLMQSLAKLQER 0.337887660812549 0.74163059431886 0.149666666666667 0.0446666666666667 8.77536307124095 1.7895881910271 0.149666666666667 0.0446666666666667 0.132575627958083 0.662279299716763 1.76947796014445 0.461632046636482 Q6AWC2 WWC2 Q6AWC2.6.S245.p_WWC2 Q6AWC2-6_S245s _1_1_245_245 Q6AWC2-6 Q6AWC2-6|Q6AWC2-4|Q6AWC2-2|Q6AWC2-5 Isoform 6 of Protein WWC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16537.16537.3 12.18 9.25 99 1 1 1 0 686.7142 1978.161 S245s TMT10 238 (K) EKQDLMQsLAK (L) EKQDLMQS(1.0)LAK K:TMT10,s:Phosphorylated S WWC2 137930.4 1 1 1158.1 171.22 HUMAN 1 8.7754 1.7896 EKQEASESPVKAVQP-p Q01167;S170-p EKQEASESPVKAVQP 0.254658962170373 0.0128060942428854 0.229 -1.18166666666667 11.3035377474399 26.3724177450806 0.229 -1.18166666666667 0.074070661849655 0.00230546336523691 2.20937446985497 -5.39276116937964 Q01167 FOXK2 Q01167.S170.p_FOXK2 Q01167_S170s _1_1_170_170 Q01167 Q01167|Q01167-2|Q01167-3 Forkhead box protein K2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6942.6942.2 13.99 8.97 1.477 2 1 1 0 756.8896 1432.8048 S170s TMT10 165 (K) QEASEsPVK (A) QEAS(0.0)ES(0.99)PVK K:TMT10,s:Phosphorylated S FOXK2 69288.9 10 2 689.1 243.19 HUMAN 1 11.3035 -26.3724 EKQKEQCSPLDTNSC-p Q9HCM1;S1208-p EKQKEQCSPLDTNSC 0.920228330966704 0.190280916596305 0.0223333333333333 -0.247 0.705413411631938 9.4761703833462 0.0223333333333333 -0.247 0.850077769118709 0.112819185931481 0.198259406814061 -1.89010884708065 Q9HCM1 KIAA1551 Q9HCM1.S1208.p_KIAA1551 Q9HCM1_S1208s _1_1_1208_1208 Q9HCM1 Q9HCM1 Uncharacterized protein KIAA1551 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8047.8047.3 13.25 13.25 2.556 3 1 1 0 821.4052 2382.236 S1208s TMT10 1203 (K) QKEQCsPLDTNSCK (Q) QKEQCS(0.99)PLDT(0.0)NS(0.0)CK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S KIAA1551 196679.6 1 5 1693.1 120.71 HUMAN 1 0.7054 -9.4762 EKQLFHGTPVTIENF-p Q9H446;T144-p EKQLFHGTPVTIENF 0.0307612753819727 0.00704935358368704 -0.836666666666667 -0.639333333333333 35.3105774167935 30.8202939340438 -0.836666666666667 -0.639333333333333 0.000294403018386057 0.000827886129808349 -8.22538630236465 -6.6746720821863 Q9H446 RWDD1 Q9H446.T144.p_RWDD1 Q9H446_T144t _1_1_144_144 Q9H446 Q9H446|Q9H446-2 RWD domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.34824.34824.3 20.74 20.74 3.812 2 1 1 0 861.4579 2502.3909 T144t TMT10 139 (K) QLFHGtPVTIENFLNWK (A) QLFHGT(0.99)PVT(0.0)IENFLNWK K:TMT10,t:Phosphorylated T RWDD1 27939 3 1 5308.1 20.74 HUMAN 1 -35.3106 -30.8203 EKQQLSPSPGQEAGI-p Q17RY0;S99-p EKQQLSPSPGQEAGI 0.447293886001129 0.739841978827674 -0.11 0.0343333333333334 6.44407063094657 1.80473239907879 -0.11 0.0343333333333334 0.226773831018548 0.65997389887932 -1.36330495057374 0.465058726623995 Q17RY0 CPEB4 Q17RY0.S99.p_CPEB4 Q17RY0_S99s _1_1_99_99 Q17RY0 Q17RY0|Q17RY0-2|B7ZLQ8|E5RJM0 Cytoplasmic polyadenylation element-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20386.20386.2 18.71 17.63 2.156 3 1 1 0 1274.1576 2467.3444 S99s TMT10 94 (K) QQLSPsPGQEAGILPETEK (A) QQLS(0.0)PS(0.99)PGQEAGILPET(0.0)EK K:TMT10,s:Phosphorylated S CPEB4 80778.1 6 1 1827.1 112.47 HUMAN 1 -6.4441 1.8047 EKQRETHSVDRLPSA-p Q92615;S620-p EKQRETHSVDRLPSA 0.836375527025859 0.259813345728376 -0.0366666666666667 -0.161666666666667 1.4984552698955 7.71152577224606 -0.0366666666666667 -0.161666666666667 0.708197636461767 0.169374264678132 -0.394625735513772 -1.58459117502421 Q92615 LARP4B Q92615.S620.p_LARP4B Q92615_S620s _1_1_620_620 Q92615 Q92615 La-related protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13546.13546.3 12.37 12.37 1.697 5 1 1 0 756.0418 2186.1437 S620s Hydrogen 617 (R) ETHsVDRLPSALTATACK (S) ET(0.0)HS(0.99)VDRLPS(0.0)ALT(0.0)AT(0.0)ACK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S LARP4B 80949.9 3 9 332.1 357.69 HUMAN 1 -1.4985 -7.7115 EKRARSESPQEALLL-p Q96NU1;S171-p EKRARSESPQEALLL 0.502549225273346 0.0117297467150433 -0.114333333333333 0.455 5.51212038787299 26.9919162420914 -0.114333333333333 0.455 0.281052829047677 0.00199897966312809 -1.19713424076996 5.55894170066068 Q96NU1 SAMD11 Q96NU1.S171.p_SAMD11 Q96NU1_S171s _1_1_171_171 Q96NU1 Q96NU1|Q96NU1-6|A0A087WYU3|I7G285 Sterile alpha motif domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20693.20693.2 12.9 12.9 2.504 2 1 1 0 824.9297 1568.8845 S171s TMT10 169 (R) SEsPQEALLLPR (E) S(0.0)ES(0.99)PQEALLLPR s:Phosphorylated S SAMD11 73391.4 2 2 4292.1 34.11 HUMAN 1 -5.5121 26.9919 EKRERRRTIHTFPCL-p Q86X02;T154-p EKRERRRTIHTFPCL 0.166211549723019 0.168675153833999 0.268333333333333 0.142 15.5907089422213 10.1674558712491 0.268333333333333 0.141098521945315 0.0276012725632789 0.0962175762900567 2.98999078789883 2.00999065874799 Q86X02 CDR2L Q86X02.T154.p_CDR2L Q86X02_T154t _1_1_154_154 Q86X02 Q86X02 Cerebellar degeneration-related protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15598.15598.2 11.38 11.38 3.027 2 1 1 0 713.3624 1345.75 T154t Hydrogen 154 (R) tIHTFPCLK (E) T(0.99)IHT(0.0)FPCLK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T CDR2L 53408.9 8 1 1833.1 112.07 HUMAN 1 15.5907 10.1675 EKRESVASGDDRAEE-p P46821;S995-p EKRESVASGDDRAEE 0.987481982540924 0.0283704665323878 0.00566666666666667 0.667333333333333 0.110696122918186 20.9587154265762 0.00566666666666665 0.667333333333333 0.974833370882745 0.00801915221973358 0.0330318712056254 4.08373178516029 P46821 MAP1B P46821.S995.p_MAP1B P46821_S995s _1_1_995_995 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16841.16841.3 17.48 17.48 3.376 2 1 1 0 912.0765 2654.2503 S995s TMT10 991 (R) ESVAsGDDRAEEDMDEAIEK (G) ES(0.0)VAS(0.99)GDDRAEEDMDEAIEK K:TMT10,s:Phosphorylated S MAP1B 271827.6 1 5 210.1 442.48 HUMAN 1 0.1107 20.9587 EKRGKRPSPLAHQPV-p Q9NQT8;S1481-p EKRGKRPSPLAHQPV 0.4825212512003 0.182427254608387 0.112 -0.178666666666667 5.82595779015182 9.71988873871968 0.112 -0.178666666666667 0.261459376378591 0.10666234465533 1.25349666540835 -1.93232714095621 Q9NQT8 KIF13B Q9NQT8.S1481.p_KIF13B Q9NQT8_S1481s _1_1_1481_1481 Q9NQT8 Q9NQT8 Kinesin-like protein KIF13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6226.6226.3 13.8 13.8 99 1 1 1 0 555.3046 1583.9332 S1481s TMT10 1479 (K) RPsPLAHQPVPR (I) RPS(1.0)PLAHQPVPR s:Phosphorylated S KIF13B 204097.3 1 11 335.1 355.82 HUMAN 1 5.826 -9.7199 EKRKRRSSLSPPSSA-p Q9BYW2;S2080-p EKRKRRSSLSPPSSA 0.898522472312718 0.207410482398277 -0.02 0.169666666666667 0.909625355032683 8.98541945134495 -0.02 0.169666666666667 0.811031018582495 0.126315909917865 -0.2510526947227 1.80519059819395 Q9BYW2 SETD2 Q9BYW2.S2080.p_SETD2 Q9BYW2_S2080sS2082s_2_2_2080_2082 Q9BYW2 Q9BYW2 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7331.7331.2 7.59 4.82 1.142 6 2 2 0 798.8256 1436.7128 S2080s S2082s Hydrogen 2078 (R) RSsLsPPSSAYER (G) RS(0.0)S(0.99)LS(0.99)PPS(0.0)S(0.0)AY(0.0)ER s:Phosphorylated S SETD2 290615.4 4 35 58.1 711.11 HUMAN 1 -0.9096 8.9854 EKRMRSRSKGRDHEN-p Q13427;S489-p EKRMRSRSKGRDHEN 0.137301954068809 0.288689972755116 0.622 -0.118 17.679446798405 7.11890544848502 0.622 -0.118 0.0170629972255248 0.194137510031946 3.39767960950123 -1.48139508428046 Q13427 PPIG Q13427.S489.p_PPIG Q13427_S489s _1_1_489_489 Q13427 Q13427|E9PG73 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.3561.3561.4 11.03 11.03 99 1 1 1 0 485.0203 1857.091 S489s TMT10 489 (R) sKGRDHENVK (E) S(1.0)KGRDHENVK K:TMT10,s:Phosphorylated S PPIG 89129.1 4 10 112.1 571.91 HUMAN 1 17.6794 -7.1189 EKRPAEITPTKKSAH-p Q8NET8-2;T35-p EKRPAEITPTKKSAH 0.0147628603234759 0.00147687096540868 -0.952666666666667 -0.962333333333333 43.3296924491373 45.6695455539757 -0.952666666666667 -0.962333333333334 4.64548171595645e-05 2.71047524135514e-05 -11.7655755651674 -13.0009598579791 Q8NET8 TRPV3 Q8NET8.2.T35.p_TRPV3 Q8NET8-2_T35t _1_1_35_35 Q8NET8-2 Q8NET8-2 Isoform 2 of Transient receptor potential cation channel subfamily V member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7697.7697.3 10.16 5.98 3.626 2 1 1 0 517.6297 1470.9044 T35t TMT10 30 (K) RPAEItPTK (K) RPAEIT(0.99)PT(0.0)K K:TMT10,t:Phosphorylated T TRPV3 91447.2 1 1 6685.1 10.16 HUMAN 1 -43.3297 -45.6695 EKRSHQRSASWGSAD-p Q86VQ1;S221-p EKRSHQRSASWGSAD 0.442576911802471 0.24405168218422 0.115666666666667 -0.151333333333333 6.52216985053645 8.0714450418031 0.115666666666667 -0.151333333333333 0.222732204199707 0.155903367429715 1.37708401037965 -1.64702523291039 Q86VQ1 GLCCI1 Q86VQ1.S221.p_GLCCI1 Q86VQ1_S221s _1_1_221_221 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16711.16711.2 10.54 10.54 1.105 3 1 1 0 844.4279 1607.8793 S221s TMT10 221 (R) sASWGSADQLK (E) S(0.99)AS(0.0)WGS(0.0)ADQLK K:TMT10,s:Phosphorylated S GLCCI1 58707.2 2 7 307.1 373.49 HUMAN 1 6.5222 -8.0714 EKRTEARSSDEENGP-p Q96B36-3;S222-p EKRTEARSSDEENGP 0.428800530001446 0.0235106314047309 0.106333333333333 0.307333333333333 6.77125039893037 22.2130303352099 0.106333333333333 0.307333333333333 0.21031728175982 0.00600754408527395 1.4209093482806 4.36613983977205 Q96B36 AKT1S1 Q96B36.3.S222.p_AKT1S1 Q96B36-3_S222sS223s_2_2_222_223 Q96B36-3 Q96B36-3|Q96B36-2 Isoform 3 of Proline-rich AKT1 substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8840.8840.3 12.44 12.44 2.621 5 2 2 0 850.0219 2388.1113 S222s S223s TMT10 218 (R) TEARssDEENGPPSSPDLDR (I) T(0.0)EARS(0.99)S(0.99)DEENGPPS(0.0)S(0.0)PDLDR s:Phosphorylated S AKT1S1 29490.1 16 8 1393.1 146.92 HUMAN 1 6.7713 22.213 EKRTKQFSDASQLDF-p Q8TEW0;S837-p EKRTKQFSDASQLDF 0.0428370985731628 0.00229787700279713 -0.515333333333333 -0.821 30.5341172596118 40.6835010706095 -0.515333333333333 -0.821 0.000884276887716529 8.54377677513633e-05 -6.59629032752044 -10.4431073979767 Q8TEW0 PARD3 Q8TEW0.S837.p_PARD3 Q8TEW0_S837s _1_1_837_837 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11|Q8TEW0-4|Q5VWV2|Q8TEW0-5|Q8TEW0-8|F5GZI3 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24091.24091.3 11.38 11.38 1.817 2 1 1 0 641.6609 1843.0002 S837s TMT10 835 (K) QFsDASQLDFVK (T) QFS(0.99)DAS(0.0)QLDFVK K:TMT10,s:Phosphorylated S PARD3 151933.9 1 15 65.1 692.2 HUMAN 1 -30.5341 -40.6835 EKSAIDLTPIVVEDK-p F5GWX5;T1646-p EKSAIDLTPIVVEDK 0.0354660797973718 0.199821006151178 -0.630333333333333 0.552 33.7461069531483 9.20106505606171 -0.630333333333334 0.552 0.000422074684672451 0.12019696295764 -7.65797159765473 1.84249486319842 F5GWX5 CHD4 F5GWX5.T1646.p_CHD4 F5GWX5_T1646t _1_1_1646_1646 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26722.26722.3 10.47 10.47 5.044 2 1 1 0 646.6922 1858.0938 T1646t TMT10 1641 (K) SAIDLtPIVVEDK (E) S(0.0)AIDLT(0.99)PIVVEDK K:TMT10,t:Phosphorylated T CHD4 218583 1 25 49.1 753.68 HUMAN 1 -33.7461 9.2011 EKSATRPSPSPERSS-p Q9UQ35;S351-p EKSATRPSPSPERSS 0.247471360406566 0.11771865620867 0.177 0.170333333333333 11.584762213931 12.2513543837324 0.177 0.170333333333333 0.0694262613124612 0.0595476410261093 2.25889201123569 2.37578406342139 Q9UQ35 SRRM2 Q9UQ35.S351.p_SRRM2 Q9UQ35_S351sS353s_2_2_351_353 Q9UQ35 Q9UQ35|Q9UQ35-2|Q9UQ35-3 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15714.15759.4 15.13 15.13 1.219 8 2 2 0 819.3982 3114.6381 S351s S353s TMT10 346 (K) SATRPsPsPERSSTGPEPPAPTPLLAER (H) S(0.0)AT(0.0)RPS(0.99)PS(0.99)PERS(0.0)S(0.0)T(0.0)GPEPPAPT(0.0)PLLAER s:Phosphorylated S SRRM2 300351.7 28 173 2.1 3310.34 HUMAN 1 11.5848 12.2514 EKSCAADSDPEPERL-p Q13207;S360-p EKSCAADSDPEPERL 0.367277640643147 0.233813872763532 0.140666666666667 0.127666666666667 8.07375639955537 8.31051646290084 0.140666666666667 0.127666666666667 0.155820416206882 0.147553105272221 1.64795301003516 1.68843134294992 Q13207 TBX2 Q13207.S360.p_TBX2 Q13207_S360s _1_1_360_360 Q13207 Q13207 T-box transcription factor TBX2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7898.7898.3 17.69 11.7 5.397 3 1 1 0 752.993 2176.9978 S360s TMT10 355 (K) SCAADsDPEPERLSEER (A) S(0.0)CAADS(0.99)DPEPERLS(0.0)EER C:Carbamidomethylation,s:Phosphorylated S TBX2 75292.9 1 2 2245.1 91.76 HUMAN 1 8.0738 8.3105 EKSCTKPSPSKKRCS-p Q9NQW6;S65-p EKSCTKPSPSKKRCS 0.0428370985731628 0.00137406073843988 0.564666666666667 -1.14366666666667 30.4637812424308 46.4826930865757 0.564666666666667 -1.14366666666667 0.000898714762881621 2.24766038568161e-05 6.57448048522766 -13.4701644098561 Q9NQW6 ANLN Q9NQW6.S65.p_ANLN Q9NQW6_S65s _1_1_65_65 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6637.6637.2 10.88 10.88 1.537 4 1 1 0 879.9756 1678.9765 S65s TMT10 60 (K) SCTKPsPSK (K) S(0.0)CT(0.0)KPS(0.99)PS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANLN 125566 6 10 68.1 675.08 HUMAN 1 30.4638 -46.4827 EKSFPLHSPVAGVAH-p Q96JN8;S907-p EKSFPLHSPVAGVAH 0.0360407965324359 0.00550441818666763 -0.673333333333333 -0.815333333333333 33.3488545952974 32.7670452254352 -0.673333333333333 -0.815333333333333 0.000462502985473042 0.000528804908170885 -7.51937019476127 -7.30721343336532 Q96JN8 NEURL4 Q96JN8.S907.p_NEURL4 Q96JN8_S907s _1_1_907_907 Q96JN8 Q96JN8|Q96JN8-2|I3L2W2 Neuralized-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12940.12940.3 13.07 13.07 13.068 2 1 1 0 595.3124 1703.9543 S907s TMT10 902 (K) SFPLHsPVAGVAHR (F) S(0.0)FPLHS(0.99)PVAGVAHR s:Phosphorylated S NEURL4 168672.6 1 2 4938.1 24.86 HUMAN 1 -33.3489 -32.767 EKSGDEGSEDEAPSG-p Q9H1E3;S234-p EKSGDEGSEDEAPSG 0.035457360213363 0.250737368937412 1.686 -0.482333333333333 33.7776517586338 7.91549334695795 1.686 -0.482333333333333 0.00041902006909933 0.161603463845091 7.66907039860897 -1.61998969945756 Q9H1E3 NUCKS1 Q9H1E3.S234.p_NUCKS1 Q9H1E3_S234s _1_1_234_234 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7558.7558.4 14.74 14.74 5.161 7 1 1 0 825.8876 3220.5584 S234s TMT10 219 (K) KTSTSPPPEKSGDEGsEDEAPSGED (-) KT(0.0)S(0.0)T(0.0)S(0.0)PPPEKS(0.0)GDEGS(0.99)EDEAPS(0.0)GED K:TMT10,s:Phosphorylated S NUCKS1 27295.9 1 19 48.1 767.83 HUMAN 1 33.7777 -7.9155 EKSHKDDSELDFSAL-p Q9H6L5;S281-p EKSHKDDSELDFSAL 0.301042141387919 0.00610722006685881 -0.144 -0.607666666666667 9.78866780100686 31.9259906619949 -0.144 -0.607666666666667 0.104986442533794 0.000641801804455878 -1.94501713330827 -7.02810558543524 Q9H6L5 FAM134B Q9H6L5.S281.p_FAM134B Q9H6L5_S281s _1_1_281_281 Q9H6L5 Q9H6L5|Q9H6L5-2 Reticulophagy regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18140.18140.3 17.1 17.1 2.886 3 1 1 0 872.7717 2536.3321 S281s TMT10 276 (K) SHKDDsELDFSALCPK (I) S(0.0)HKDDS(0.99)ELDFS(0.0)ALCPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RETREG1 55250.1 1 3 3380.1 52.45 HUMAN 1 -9.7887 -31.926 EKSILLESDNEDEKL-p Q8IWY7;S1191-p EKSILLESDNEDEKL 0.373935912464191 0.481648725361108 -0.138 -0.0676666666666667 7.91274519731957 4.23616486561866 -0.138 -0.0676666666666666 0.161705756428137 0.377036602606951 -1.62002050485523 -0.96184197406101 Q8IWY7 TTBK2 Q8IWY7.S1191.p_TTBK2 Q8IWY7_S1191s _1_1_1191_1191 Q8IWY7 Q8IWY7|Q6IQ55|Q6IQ55-2 Tau-tubulin kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18946.18946.2 16.84 11.13 9.129 2 1 1 0 965.4771 1849.9795 S1191s TMT10 1186 (K) SILLEsDNEDEK (L) S(0.0)ILLES(0.99)DNEDEK K:TMT10,s:Phosphorylated S TTBK2 184004.2 2 5 1983.1 104.1 HUMAN 1 -7.9127 -4.2362 EKSKPAGSDGERRGV-p Q1KMD3;S193-p EKSKPAGSDGERRGV 0.301870812532595 0.0399045165200153 0.171 0.541666666666667 9.75385653806365 18.7591850137609 0.171 0.541666666666667 0.105831352463308 0.0133070411117767 1.93897690209688 3.61445515288654 Q1KMD3 HNRNPUL2 Q1KMD3.S193.p_HNRNPUL2 Q1KMD3_S193s _1_1_193_193 Q1KMD3 Q1KMD3|H3BQZ7 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3700.3700.2 10.19 4.39 3.312 2 1 1 0 771.3903 1461.8062 S193s TMT10 188 (K) SKPAGsDGER (R) S(0.0)KPAGS(0.99)DGER K:TMT10,s:Phosphorylated S HNRNPUL2 85673.7 16 4 294.1 379.87 HUMAN 1 9.7539 18.7592 EKSPGKMSPECDGLG-p O43296;S155-p EKSPGKMSPECDGLG 0.491261982575074 0.00332315329853812 -0.102333333333333 0.7 5.68329055792262 37.1089010813432 -0.102333333333333 0.7 0.270191040768689 0.000194585238881706 -1.22793216211192 8.90398925527856 O43296 ZNF264 O43296.S155.p_ZNF264 O43296_S155s _1_1_155_155 O43296 O43296 Zinc finger protein 264 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12969.12969.3 14.5 14.5 2.44 4 1 1 0 907.082 2639.2628 S155s TMT10 150 (K) SPGKMsPECDGLGTADGVCSR (I) S(0.0)PGKMS(0.99)PECDGLGT(0.0)ADGVCS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF264 72639.3 1 22 240.49 415.72 HUMAN 1 -5.6833 37.1089 EKSPSFASEWDEIEK-p Q92625;S666-p EKSPSFASEWDEIEK 0.0848925536936968 0.126357209367385 0.368333333333333 0.190333333333333 22.9255044671989 11.8455973793669 0.368333333333333 0.190333333333333 0.00509858370075239 0.0653792993493153 4.53683871646144 2.30384531202308 Q92625 ANKS1A Q92625.S666.p_ANKS1A Q92625_S666s _1_1_666_666 Q92625 Q92625 Ankyrin repeat and SAM domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26595.26595.3 16.4 15.83 3.691 3 1 1 0 688.3312 1983.0111 S666s TMT10 661 (K) SPSFAsEWDEIEK (I) S(0.0)PS(0.0)FAS(0.99)EWDEIEK K:TMT10,s:Phosphorylated S ANKS1A 124075.6 1 10 709.1 238.85 HUMAN 1 22.9255 11.8456 EKSRMGPSGGEGMEP-p Q14847-2;S134-p EKSRMGPSGGEGMEP 0.0977888731266871 0.575280514614872 0.417666666666667 -0.116333333333333 21.3687720462856 3.23861956503666 0.417666666666667 -0.116333333333333 0.00729663791186577 0.474392750305617 4.17905688842218 -0.768362696447399 Q14847 LASP1 Q14847.2.S134.p_LASP1 Q14847-2_S134s _1_1_134_134 Q14847-2 Q14847-2|Q14847-3 Isoform 2 of LIM and SH3 domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7526.7526.3 14.16 14.16 99 1 1 1 0 600.2653 1718.8152 S134s TMT10 131 (R) MGPsGGEGMEPERR (D) MGPS(1.0)GGEGMEPERR s:Phosphorylated S LASP1 36812.2 5 6 1322.1 154.29 HUMAN 1 21.3688 -3.2386 EKSRQRKSLSNPDIA-p Q96PE2;S461-p EKSRQRKSLSNPDIA 0.769995010044579 0.171386275553963 -0.0446666666666667 0.148333333333333 2.17489332668461 10.0710092010708 -0.0446666666666667 0.148333333333333 0.606053086485963 0.0983782470646226 -0.54719427546303 1.99323743049723 Q96PE2 ARHGEF17 Q96PE2.S461.p_ARHGEF17 Q96PE2_S461s _1_1_461_461 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.37653.37653.2 15.59 15.59 2.481 6 1 1 0 1193.6273 2306.2805 S461s TMT10 461 (K) sLSNPDIASETLTLLSFLR (S) S(0.99)LS(0.0)NPDIAS(0.0)ET(0.0)LT(0.0)LLS(0.0)FLR s:Phosphorylated S ARHGEF17 223779.6 6 15 30.1 908.19 HUMAN 1 -2.1749 10.071 EKSRVQKSFQAIHQF-p Q6IPU0;S38-p EKSRVQKSFQAIHQF 0.769256878109637 0.00801821108823194 -0.043 -0.473666666666667 2.18213795889869 29.8684030376901 -0.043 -0.473666666666667 0.605042948931431 0.00103076507767899 -0.548770375610931 -6.38212691042996 Q6IPU0 CENPP Q6IPU0.S38.p_CENPP Q6IPU0_S38s _1_1_38_38 Q6IPU0 Q6IPU0|A0A087WTF1 Centromere protein P HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26440.26440.3 11.2 11.2 99 1 1 1 0 748.3809 2163.1751 S38s TMT10 38 (K) sFQAIHQFNLEGWK (S) S(1.0)FQAIHQFNLEGWK K:TMT10,s:Phosphorylated S CENPP 33449.6 2 1 6518.1 11.2 HUMAN 1 -2.1821 -29.8684 EKSSSNDSVDEETAE-p Q99590;S405-p EKSSSNDSVDEETAE 0.70004138781017 0.173778684773415 0.0526666666666667 0.142666666666667 2.90980721225998 9.99383499226816 0.0526666666666667 0.142666666666667 0.511704550121847 0.100142055352178 0.702032825998971 1.97983932628701 Q99590 SCAF11 Q99590.S405.p_SCAF11 Q99590_S405s _1_1_405_405 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16360.16360.2 23.13 23.13 3.333 8 1 1 0 1432.652 2784.3311 S405s TMT10 400 (K) SSSNDsVDEETAESDTSPVLEK (E) S(0.0)S(0.0)S(0.0)NDS(0.99)VDEET(0.0)AES(0.0)DT(0.0)S(0.0)PVLEK K:TMT10,s:Phosphorylated S SCAF11 166418 5 3 120.1 549.85 HUMAN 1 2.9098 9.9938 EKSVGDESWEQTQEG-p O75691;S788-p EKSVGDESWEQTQEG 0.49340271649839 0.627361098295866 0.108333333333333 -0.049 5.64893487197518 2.75422664041022 0.108333333333333 -0.049 0.272336914551057 0.530368028248459 1.22176201841532 -0.669945334810034 O75691 UTP20 O75691.S788.p_UTP20 O75691_S788s _1_1_788_788 O75691 O75691 Small subunit processome component 20 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22287.22287.5 23.47 23.47 2.292 6 1 1 0 1020.8828 5020.4172 S788s TMT10 783 (K) SVGDEsWEQTQEGDVGALYHEQLALKTDCQERLDHTNFR (F) S(0.0)VGDES(0.99)WEQT(0.0)QEGDVGALY(0.0)HEQLALKT(0.0)DCQERLDHT(0.0)NFR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S UTP20 321004.1 8 2 1054.1 182.86 HUMAN 1 5.6489 -2.7542 EKSVKLSSQISAGEE-p Q86UE4;S295-p EKSVKLSSQISAGEE 0.953014691362228 0.966795771256058 0.00899999999999999 -0.00499999999999999 0.411915752247053 0.207625711504739 0.00899999999999999 -0.00499999999999998 0.909511981790642 0.953317200222275 0.119074642931039 -0.0612990639563366 Q86UE4 MTDH Q86UE4.S295.p_MTDH Q86UE4_S295s _1_1_295_295 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14507.14507.3 8.99 8.99 1.118 3 1 1 0 562.9622 1606.9052 S295s TMT10 293 (K) LSsQISAGEEK (W) LS(0.0)S(0.99)QIS(0.0)AGEEK K:TMT10,s:Phosphorylated S MTDH 63892.9 4 11 77.1 644.48 HUMAN 1 0.4119 -0.2076 EKSYSRPSPLVLPSS-p X6RAB3;S712-p EKSYSRPSPLVLPSS 0.53809633131898 0.0141884945196519 0.103 -0.55 4.97641539855971 25.6303195707733 0.103 -0.55 0.317949729724097 0.00273506746199899 1.09973431287087 -5.19850663707325 X6RAB3 NotFound X6RAB3.S712.p_NotFound X6RAB3_S712s _1_1_712_712 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13852.13852.3 11.3 8.18 2.116 6 1 1 0 618.9954 1775.0013 S712s TMT10 707 (K) SYSRPsPLVLPSSR (I) S(0.0)Y(0.0)S(0.0)RPS(0.99)PLVLPS(0.0)S(0.0)R s:Phosphorylated S USP6NL 96835.5 1 13 364.1 342.41 HUMAN 1 4.9764 -25.6303 EKTAESQTPTPSATS-p P55265-4;T644-p EKTAESQTPTPSATS 0.150283451076775 0.237486668626404 -0.245333333333333 -0.115 16.5782988937162 8.22396558663985 -0.245333333333333 -0.115 0.0219872093036759 0.150523199599656 -3.18003241420722 -1.67344576520975 P55265 ADAR P55265.4.T644.p_ADAR P55265-4_T644t _1_1_644_644 P55265-4 P55265|P55265-2|P55265-3|P55265-5|P55265-4 Isoform 4 of Double-stranded RNA-specific adenosine deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21486.21486.2 19.38 15.57 1.473 8 1 1 0 1191.5841 2302.1967 T644t TMT10 639 (K) TAESQtPTPSATSFFSGK (S) T(0.0)AES(0.0)QT(0.99)PT(0.0)PS(0.0)AT(0.0)S(0.0)FFS(0.0)GK K:TMT10,t:Phosphorylated T ADAR 142147.5 7 9 584.1 265.43 HUMAN 1 -16.5783 -8.224 EKTDRRQSFASLALR-p Q12955;S1459-p EKTDRRQSFASLALR 0.232360077075551 0.352443374882569 0.242333333333333 0.316666666666667 12.1876969101169 6.00396336622236 0.242333333333333 0.316666666666667 0.0604268991921947 0.250959513264837 2.3656716752331 1.28496373013404 Q12955 ANK3 Q12955.S1459.p_ANK3 Q12955_S1459s _1_1_1459_1459 Q12955 Q12955|Q12955-4|Q12955-5|Q12955-7|Q12955-6 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11829.11829.2 10.86 7.66 2.242 2 1 1 0 614.814 1148.6535 S1459s Hydrogen 1457 (R) RQsFASLALR (K) RQS(0.99)FAS(0.0)LALR s:Phosphorylated S ANK3 482683.6 3 12 135.1 530.51 HUMAN 1 12.1877 6.004 EKTELNLSKGSLTND-p Q5W0B1;S592-p EKTELNLSKGSLTND 0.0469412164037233 0.00714231278100688 -0.607 -0.739666666666667 29.5035418578855 30.7264015728487 -0.607 -0.739666666666667 0.00112110377313054 0.000845979506794148 -6.28248569190922 -6.64534314763781 Q5W0B1 RNF219 Q5W0B1.S592.p_RNF219 Q5W0B1_S592s _1_1_592_592 Q5W0B1 Q5W0B1 RING finger protein 219 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15490.15490.2 9.81 1.74 5.295 2 1 1 0 671.8734 1262.772 S592s TMT10 587 (K) TELNLsK (G) T(0.0)ELNLS(0.99)K K:TMT10,s:Phosphorylated S RNF219 82427.3 1 8 1133.1 173.85 HUMAN 1 -29.5035 -30.7264 EKTERSNSEDKLNSK-p Q9H2G2;S372-p EKTERSNSEDKLNSK 0.208101883763985 0.704019392428412 0.478666666666667 -0.0766666666666666 13.1463619798751 2.09404099620137 0.478666666666667 -0.0766666666666666 0.0484578121481049 0.617441619544565 2.53747432492649 -0.529466270445817 Q9H2G2 SLK Q9H2G2.S372.p_SLK Q9H2G2_S372s _1_1_372_372 Q9H2G2 Q9H2G2|Q9H2G2-2 STE20-like serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7917.7917.2 13.05 13.05 2.17 3 1 1 0 945.0023 1809.0321 S372s TMT10 370 (R) SNsEDKLNSK (I) S(0.0)NS(0.99)EDKLNS(0.0)K K:TMT10,s:Phosphorylated S SLK 143320 9 7 329.1 359.67 HUMAN 1 13.1464 -2.094 EKTGWDTSESELSEG-p F8VU11;S868-p EKTGWDTSESELSEG 0.378743727765928 0.166328660220668 0.125 0.189 7.79068527804057 10.2457819717691 0.125 0.189 0.166315019936495 0.0944978228448883 1.59882782454938 2.02360429842329 F8VU11 PRPF40B F8VU11.S868.p_PRPF40B F8VU11_S868sS870sS873s_3_3_868_873 F8VU11 F8VU11|Q6NWY9|Q6NWY9-3 PRP40 pre-mRNA processing factor 40 homolog B (Yeast), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20199.20199.3 9.8 9.8 1.108 5 3 3 0 960.7383 2640.3041 S868s S870s S873s TMT10 861 (K) EKTGWDTsEsELsEGELER (R) EKT(0.0)GWDT(0.0)S(0.99)ES(0.99)ELS(0.99)EGELER K:TMT10,s:Phosphorylated S PRPF40B 101691.8 1 8 1236.1 163.46 HUMAN 1 7.7907 10.2458 EKTIASDSEEEAGKE-p Q96ST2;S440-p EKTIASDSEEEAGKE 0.206669838771857 0.00806068952798809 -0.669 1.41233333333333 13.2380983069803 29.8244179099072 -0.669 1.41233333333333 0.0474449692287091 0.00104125765928149 -2.55406079973402 6.36886235729998 Q96ST2 IWS1 Q96ST2.S440.p_IWS1 Q96ST2_S440s _1_1_440_440 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9905.9905.2 16.34 10.7 1.287 3 1 1 0 887.9275 1694.8849 S440s TMT10 435 (K) TIASDsEEEAGK (E) T(0.0)IAS(0.0)DS(0.99)EEEAGK K:TMT10,s:Phosphorylated S IWS1 92010 1 8 230.1 422.87 HUMAN 1 -13.2381 29.8244 EKTKGATSPGQKAKL-p Q15061;S590-p EKTKGATSPGQKAKL 0.039271926938295 0.00439867900321505 0.565666666666667 0.892333333333333 31.7981052204935 34.6279380814549 0.565666666666667 0.892333333333334 0.000660981764250504 0.000344513458073608 6.99841207819889 7.95824418564914 Q15061 WDR43 Q15061.S590.p_WDR43 Q15061_S590s _1_1_590_590 Q15061 Q15061 WD repeat-containing protein 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4825.4825.2 9.7 2.68 1.316 2 1 1 0 642.3417 1203.7098 S590s TMT10 587 (K) GATsPGQK (A) GAT(0.0)S(0.99)PGQK K:TMT10,s:Phosphorylated S WDR43 75859.2 1 6 2318.1 87.99 HUMAN 1 31.7981 34.6279 EKTQDQQSLSDVEGA-p P06401;S79-p EKTQDQQSLSDVEGA 0.222950846286183 0.456444509611081 0.363 -0.154 12.5346149130833 4.54199457534376 0.363 -0.154 0.0557877066650704 0.351399017158241 2.42753536129808 -1.01922450158289 P06401 PGR P06401.S79.p_PGR P06401_S79s _1_1_79_79 P06401 P06401|P06401-5|Q8NG42|Q8NG44|Q8NG45|A0A087WXR4 Progesterone receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12748.12748.2 14.45 14.45 1.236 5 1 1 0 1046.97 2012.9722 S79s TMT10 74 (K) TQDQQsLSDVEGAYSR (A) T(0.0)QDQQS(0.99)LS(0.0)DVEGAY(0.0)S(0.0)R s:Phosphorylated S PGR 100348.6 1 2 260.1 397.57 HUMAN 1 12.5346 -4.542 EKTRWLNSPNTYMKV-p Q9UEY8;S442-p EKTRWLNSPNTYMKV 0.318436709095685 0.00731052760776104 -0.195333333333333 -0.525 9.30013972340622 30.5513840781565 -0.195333333333333 -0.525 0.117485975615219 0.000880768131194315 -1.86033183930914 -6.59095270548511 Q9UEY8 ADD3 Q9UEY8.S442.p_ADD3 Q9UEY8_S442s _1_1_442_442 Q9UEY8 Q9UEY8|Q9UEY8-2 Gamma-adducin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23221.23221.3 9.58 9.58 1.134 3 1 1 0 597.97 1711.9242 S442s TMT10 439 (R) WLNsPNTYMK (V) WLNS(0.99)PNT(0.0)Y(0.0)MK K:TMT10,s:Phosphorylated S ADD3 79495.5 1 23 264.2 396.09 HUMAN 1 -9.3001 -30.5514 EKVAVSPTPPVSPEV-p Q9UPV0;T568-p EKVAVSPTPPVSPEV 0.266891167886536 0.0799587703347656 -0.17 0.342 10.873419333854 14.5598670401758 -0.17 0.342 0.0817820639279481 0.0349955880809457 -2.13394790514295 2.79454592248121 Q9UPV0 CEP164 Q9UPV0.T568.p_CEP164 Q9UPV0_T568t _1_1_568_568 Q9UPV0 Q9UPV0|Q9UPV0-2 Centrosomal protein of 164 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16835.16835.3 8.8 8.8 1.116 3 1 1 0 581.9769 1663.958 T568t TMT10 563 (K) VAVSPtPPVSPEVR (S) VAVS(0.0)PT(0.99)PPVS(0.0)PEVR t:Phosphorylated T CEP164 164824.4 2 3 1433.1 142.71 HUMAN 1 -10.8734 14.5599 EKVFDDESDEKEDEE-p O43719;S642-p EKVFDDESDEKEDEE 0.506134532757588 0.00570011283768187 -0.168333333333333 0.528 5.45863479413029 32.5041832166007 -0.168333333333333 0.528 0.284535540511462 0.000561799926878885 -1.18748098027104 7.21900279142241 O43719 HTATSF1 O43719.S642.p_HTATSF1 O43719_S642s _1_1_642_642 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16994.16994.2 22.24 22.24 11.342 2 1 1 0 1480.1622 2879.3561 S642s TMT10 637 (K) VFDDEsDEKEDEEYADEK (G) VFDDES(0.99)DEKEDEEY(0.0)ADEK K:TMT10,s:Phosphorylated S HTATSF1 86421.8 10 13 149.1 512 HUMAN 1 -5.4586 32.5042 EKVLLSDSNLHDA__-p Q6FI81;S307-p EKVLLSDSNLHDA__ 0.485569312354018 0.0614106167463853 0.0976666666666667 -0.257 5.78125021789002 16.1359271604085 0.0976666666666667 -0.25359006127141 0.264164818785188 0.0243448601439285 1.24549537004687 -3.09212547616453 Q6FI81 CIAPIN1 Q6FI81.S307.p_CIAPIN1 Q6FI81_S307s _1_1_307_307 Q6FI81 Q6FI81|Q6FI81-3|H3BV90|Q6FI81-2 Anamorsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19531.19531.2 8.8 8.8 2.451 2 1 1 0 746.8669 1412.7583 S307s TMT10 302 (K) VLLSDsNLHDA (-) VLLS(0.0)DS(0.99)NLHDA s:Phosphorylated S CIAPIN1 34152.3 3 7 2232.1 92.49 HUMAN 1 5.7813 -16.1359 EKVLYLLSQLQQSQM-p O95239;S936-p EKVLYLLSQLQQSQM 0.843942307663143 0.0125557733612715 -0.04 0.394666666666667 1.42711584773532 26.5162425080952 -0.04 0.394666666666667 0.719926923186698 0.00223036401337194 -0.377831901042991 5.43101119012903 O95239 KIF4A O95239.S936.p_KIF4A O95239_S936s _1_1_936_936 O95239 O95239|O95239-2 Chromosome-associated kinesin KIF4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.35316.35316.3 11.31 11.31 1.369 3 1 1 0 806.4337 2337.3252 S936s TMT10 931 (K) VLYLLsQLQQSQMAEK (Q) VLY(0.0)LLS(0.99)QLQQS(0.0)QMAEK K:TMT10,s:Phosphorylated S KIF4A 141476.1 1 7 516.1 285.41 HUMAN 1 -1.4271 26.5162 EKVNKTHSVNGITEE-p O75534;S584-p EKVNKTHSVNGITEE 0.488613596629468 0.142674232775302 -0.098 -0.161666666666667 5.72929713546261 11.1432164732057 -0.098 -0.161666666666667 0.267343904447363 0.0768561017538602 -1.23618614529693 -2.18022111842076 O75534 CSDE1 O75534.S584.p_CSDE1 O75534_S584s _1_1_584_584 O75534 O75534-4|O75534-3|O75534-2|E9PLT0 Cold shock domain-containing protein E1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16106.16106.3 19.69 19.69 1.121 6 1 1 0 853.088 2477.2924 S584s TMT10 582 (K) THsVNGITEEADPTIYSGK (V) T(0.0)HS(0.99)VNGIT(0.0)EEADPT(0.0)IY(0.0)S(0.0)GK K:TMT10,s:Phosphorylated S CSDE1 89738.9 1 9 1077.1 180.35 HUMAN 1 -5.7293 -11.1432 EKVPPPRSPQAQEAP-p E9PGC8;S1307-p EKVPPPRSPQAQEAP 0.148266672319898 0.612094631936622 -0.311666666666667 0.0536666666666667 16.7932642677136 2.89685184472092 -0.311666666666667 0.0536666666666667 0.0209253905907814 0.513233286622791 -3.22202656767314 0.699286503229651 E9PGC8 NotFound E9PGC8.S1307.p_NotFound E9PGC8_S1307s _1_1_1307_1307 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25111.25111.5 35.02 27.06 16.187 3 1 1 0 939.4988 4613.4852 S1307s TMT10 1299 (K) EEKVPPPRsPQAQEAPVNIDEGLTGCTIQLLPAQDK (A) EEKVPPPRS(0.99)PQAQEAPVNIDEGLT(0.0)GCT(0.0)IQLLPAQDK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MAP1A 332906.7 10 18 20.1 1016.98 HUMAN 1 -16.7933 2.8969 EKVSKRVSAVEEVRS-p Q9UJY4;S233-p EKVSKRVSAVEEVRS 0.175458928500627 0.102258132282505 -0.407 -0.296 15.0412173080941 13.0804530603559 -0.407 -0.296 0.0313240760135196 0.0491988208301293 -2.88618509363464 -2.52417911094224 Q9UJY4 GGA2 Q9UJY4.S233.p_GGA2 Q9UJY4_S233s _1_1_233_233 Q9UJY4 Q9UJY4 ADP-ribosylation factor-binding protein GGA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8225.8225.2 8.53 6.15 99 1 1 1 0 677.3583 1273.7426 S233s TMT10 231 (K) RVsAVEEVR (S) RVS(1.0)AVEEVR s:Phosphorylated S GGA2 67662.6 1 1 6953.1 8.53 HUMAN 1 -15.0412 -13.0805 EKVTELESLLEETQA-p Q6P2H3;S518-p EKVTELESLLEETQA 0.705319541148296 0.111964500906984 0.0536666666666667 0.290333333333333 2.85070270797224 12.5501490521796 0.0536666666666667 0.290333333333333 0.518716101544073 0.0555885178667575 0.689921699752976 2.42903534817132 Q6P2H3 CEP85 Q6P2H3.S518.p_CEP85 Q6P2H3_S518s _1_1_518_518 Q6P2H3 Q6P2H3|Q6P2H3-2|Q6P2H3-4 Centrosomal protein of 85 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.36150.36150.3 13.47 12.51 3.809 3 1 1 0 734.0309 2120.1107 S518s TMT10 513 (K) VTELEsLLEETQAICR (E) VT(0.0)ELES(0.99)LLEET(0.0)QAICR C:Carbamidomethylation,s:Phosphorylated S CEP85 86322.3 1 4 1644.1 124.14 HUMAN 1 2.8507 12.5501 EKVTFNLSKGACSSS-p O60870;S208-p EKVTFNLSKGACSSS 0.0908563710854298 0.400606638387919 -0.678666666666667 -0.102 22.1533898833255 5.28232379942521 -0.678666666666667 -0.102 0.00609061309165393 0.296324540792662 -4.35709405926945 -1.15530804890082 O60870 KIN O60870.S208.p_KIN O60870_S208s _1_1_208_208 O60870 O60870|O60870-2 DNA/RNA-binding protein KIN17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21037.21037.2 9.72 4.45 4.733 2 1 1 0 673.8771 1266.7822 S208s TMT10 203 (K) VTFNLsK (G) VT(0.0)FNLS(0.99)K K:TMT10,s:Phosphorylated S KIN 45772.3 2 1 5329.1 20.45 HUMAN 1 -22.1534 -5.2823 EKVVYAFSPKIGRKL-p A7KAX9;S892-p EKVVYAFSPKIGRKL 0.400124584561269 0.546607100352311 -0.131666666666667 -0.061 7.3391857850499 3.52758641290148 -0.131666666666667 -0.061 0.184536135495087 0.443855247495704 -1.52026494985341 -0.825548775308028 A7KAX9 ARHGAP32 A7KAX9.S892.p_ARHGAP32 A7KAX9_S892s _1_1_892_892 A7KAX9 A7KAX9|A7KAX9-2|G3V174 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20648.20851.2 12.97 12.97 7.15 2 1 1 0 724.9012 1368.8291 S892s TMT10 887 (K) VVYAFsPK (I) VVY(0.0)AFS(0.99)PK K:TMT10,s:Phosphorylated S ARHGAP32 232236.5 4 16 159.1 497.4 HUMAN 1 -7.3392 -3.5276 EKWKQEPSEDEQEQG-p O14647;S156-p EKWKQEPSEDEQEQG 0.640615783875993 0.0275163694325009 0.066 0.287 3.61252477888133 21.1631914095705 0.066 0.287 0.435258761645207 0.00765034215511033 0.842298716053987 4.12899696505473 O14647 CHD2 O14647.S156.p_CHD2 O14647_S156s _1_1_156_156 O14647 O14647|O14647-2|B7Z3I4|O14647-3 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11000.11000.4 19.45 19.45 5.188 4 1 1 0 950.9731 3720.901 S156s TMT10 151 (K) WKQEPsEDEQEQGTSAESEPEQKK (V) WKQEPS(0.99)EDEQEQGT(0.0)S(0.0)AES(0.0)EPEQKK K:TMT10,s:Phosphorylated S CHD2 212309.6 4 2 482.1 298.11 HUMAN 1 3.6125 21.1632 EKWMNSLSPEKVLSE-p J3QS41;S248-p EKWMNSLSPEKVLSE 0.327023352325424 0.71411389521305 -0.290666666666667 0.0466666666666667 9.08477728244598 2.01349940955846 -0.290666666666667 0.0466666666666667 0.123458862647678 0.628999150700579 -1.82303937660106 0.511729948217274 J3QS41 HELZ J3QS41.S248.p_HELZ J3QS41_S248s _1_1_248_248 J3QS41 J3QS41|P42694|P42694-2|A0A075B6R3 Probable helicase with zinc finger domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21030.21030.3 11.12 11.12 2.135 2 1 1 0 543.942 1549.8449 S248s TMT10 243 (K) WMNSLsPEK (V) WMNS(0.0)LS(0.99)PEK K:TMT10,s:Phosphorylated S HELZ 220821.8 1 2 466.1 303.39 HUMAN 1 -9.0848 2.0135 EKWNADHSKSDRMTR-p Q8TBA6;S274-p EKWNADHSKSDRMTR 0.043077758776211 0.0404650891952282 -0.941 -0.262666666666667 30.381159151884 18.675357378463 -0.941 -0.262666666666667 0.00091597597930442 0.0135663888866269 -6.5489355408265 -3.59717255325205 Q8TBA6 GOLGA5 Q8TBA6.S274.p_GOLGA5 Q8TBA6_S274s _1_1_274_274 Q8TBA6 Q8TBA6|Q8TBA6-2 Golgin subfamily A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7271.7271.3 9.95 2.81 99 1 1 1 0 465.8996 1315.7159 S274s TMT10 269 (K) WNADHsK (S) WNADHS(1.0)K K:TMT10,s:Phosphorylated S GOLGA5 83080 1 6 909.1 201.86 HUMAN 1 -30.3812 -18.6754 EKYLGFGTPSNLGKG-p O76031;T443-p EKYLGFGTPSNLGKG 0.306684187031916 0.961653000540495 0.226333333333333 -0.00499999999999997 9.60984437148455 0.243271067652055 0.226333333333333 -0.00499999999999997 0.109399556867112 0.945524732230627 1.91399940454307 -0.0715505442394819 O76031 CLPX O76031.T443.p_CLPX O76031_T443t _1_1_443_443 O76031 O76031 ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24431.24431.3 14.1 14.1 2.892 3 1 1 0 597.9868 1711.9783 T443t TMT10 438 (K) YLGFGtPSNLGK (G) Y(0.0)LGFGT(0.99)PS(0.0)NLGK K:TMT10,t:Phosphorylated T CLPX 69964.2 2 1 3409.1 51.77 HUMAN 1 9.6098 -0.2433 EKYYLKNSPDLGPIG-p Q8TB72;S1052-p EKYYLKNSPDLGPIG 0.191404434921086 0.181252370549945 0.227333333333333 -0.134333333333333 14.015720838938 9.75611068082267 0.227333333333333 -0.134333333333333 0.0396668684677073 0.105776436481829 2.69580531878809 -1.93860548831116 Q8TB72 PUM2 Q8TB72.S1052.p_PUM2 Q8TB72_S1052s _1_1_1052_1052 Q8TB72 Q8TB72 Pumilio homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29952.29952.3 12.02 12.02 12.023 3 1 1 0 881.1226 2561.3838 S1052s TMT10 1047 (K) YYLKNsPDLGPIGGPPNGML (-) Y(0.0)Y(0.0)LKNS(0.99)PDLGPIGGPPNGML K:TMT10,s:Phosphorylated S PUM2 114784.2 2 11 944.1 197.75 HUMAN 1 14.0157 -9.7561 ELAELRHSQEELLQR-p Q6P2E9;S967-p ELAELRHSQEELLQR 0.868689771390984 0.587542982414766 -0.0263333333333333 0.058 1.19341135358037 3.12150148365308 -0.0263333333333334 0.058 0.759729280326467 0.487359966310512 -0.321713919728458 0.744877399178543 Q6P2E9 EDC4 Q6P2E9.S967.p_EDC4 Q6P2E9_S967s _1_1_967_967 Q6P2E9 Q6P2E9|Q6P2E9-2 Enhancer of mRNA-decapping protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14019.14019.3 12.28 12.28 99 1 1 1 0 720.7044 2080.1348 S967s TMT10 960 (R) ELAELRHsQEELLQR (L) ELAELRHS(1.0)QEELLQR s:Phosphorylated S EDC4 153084.9 2 19 177.1 481.34 HUMAN 1 -1.1934 3.1215 ELAKHAVSEGTKAVT-p U3KQK0;S113-p ELAKHAVSEGTKAVT 0.0447859715508879 0.00463734855393385 0.565 0.595 29.9158485604322 34.143860431438 0.565 0.595 0.00101956552944677 0.000385135859283024 6.40656110926748 7.78429606023696 U3KQK0 NotFound U3KQK0.S113.p_NotFound U3KQK0_S113s _1_1_113_113 U3KQK0 U3KQK0|Q5QNW6-2|Q96A08|P57053|P33778|P62807 Histone H2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4440.4440.2 9.66 9.66 2.3 2 1 1 0 683.8602 1286.7469 S113s TMT10 110 (K) HAVsEGTK (A) HAVS(0.99)EGT(0.0)K K:TMT10,s:Phosphorylated S HIST1H2BN 18803.6 1 9 2194.1 93.83 HUMAN 1 29.9158 34.1439 ELAPKVASPGSTIDT-p Q9P2M7;S159-p ELAPKVASPGSTIDT 0.159825824883313 0.0679218900464006 -0.229666666666667 -0.388333333333333 15.9507959784645 15.5401294957005 -0.229666666666667 -0.388333333333333 0.0254050703667716 0.0279246057583916 -3.05874828747669 -2.97835017242917 Q9P2M7 CGN Q9P2M7.S159.p_CGN Q9P2M7_S159s _1_1_159_159 Q9P2M7 Q9P2M7|Q9P2M7-2 Cingulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36670.36670.4 19.82 19.82 2.282 8 1 1 0 943.24 3689.975 S159s TMT10 157 (K) VAsPGSTIDTAPLSSVDSLINKFDSQLGGQAR (G) VAS(0.99)PGS(0.0)T(0.0)IDT(0.0)APLS(0.0)S(0.0)VDS(0.0)LINKFDS(0.0)QLGGQAR K:TMT10,s:Phosphorylated S CGN 136611.7 4 7 239.1 416.31 HUMAN 1 -15.9508 -15.5401 ELARIATSLDGFDVA-p O60664;S217-p ELARIATSLDGFDVA 0.810035198209422 0.701604903578932 -0.036 0.0436666666666667 1.75620834509816 2.11524684015163 -0.036 0.0436666666666667 0.667389186274407 0.614434108094028 -0.454109196231524 0.534112323125296 O60664 PLIN3 O60664.S217.p_PLIN3 O60664_S217s _1_1_217_217 O60664 O60664|O60664-3|O60664-4|O60664-2 Perilipin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24413.24413.2 11.35 11.35 1.175 3 1 1 0 1072.5305 2064.0923 S217s TMT10 214 (R) IATsLDGFDVASVQQQR (Q) IAT(0.0)S(0.99)LDGFDVAS(0.0)VQQQR s:Phosphorylated S PLIN3 47245.3 2 8 1075.1 180.54 HUMAN 1 -1.7562 2.1152 ELARRQMSLTEKGGQ-p Q5VWQ8;S895-p ELARRQMSLTEKGGQ 0.819486223186259 0.314233067889566 -0.0443333333333333 -0.109333333333333 1.66512045763324 6.64410732251526 -0.0443333333333333 -0.109333333333333 0.681534671149658 0.216565497655113 -0.433293576853238 -1.39819387689075 Q5VWQ8 DAB2IP Q5VWQ8.S895.p_DAB2IP Q5VWQ8_S895s _1_1_895_895 Q5VWQ8 Q5VWQ8 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13175.13175.2 10.08 10.08 1.148 2 1 1 0 687.8595 1294.7441 S895s TMT10 893 (R) QMsLTEK (G) QMS(0.99)LT(0.0)EK K:TMT10,s:Phosphorylated S DAB2IP 132592.9 3 15 281.1 388.28 HUMAN 1 -1.6651 -6.6441 ELASGLPSPAATQEL-p O95359;S1562-p ELASGLPSPAATQEL 0.602377813619717 0.557379341978482 -0.103 -0.100333333333333 4.0643778330432 3.42151530651951 -0.103 -0.100333333333333 0.392249335647884 0.454829336947608 -0.929415642404455 -0.804677862704095 O95359 TACC2 O95359.S1562.p_TACC2 O95359_S1562s _1_1_1562_1562 O95359 O95359|E9PBC6|O95359-3|E7EMZ9 Transforming acidic coiled-coil-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17833.17833.3 10.53 10.53 5.728 4 1 1 0 882.4555 2565.3834 S1562s TMT10 1552 (R) SRQELASGLPsPAATQELPVER (A) S(0.0)RQELAS(0.0)GLPS(0.99)PAAT(0.0)QELPVER s:Phosphorylated S TACC2 311818.1 1 10 101.1 597.93 HUMAN 1 -4.0644 -3.4215 ELCCNDESGEDVEVP-p P22314;S1044-p ELCCNDESGEDVEVP 0.908843022475064 0.614838978636992 0.022 0.0553333333333334 0.815397462361916 2.8705314306583 0.022 0.0553333333333334 0.828820059943555 0.516353181110096 0.226909487955411 0.693895812033728 P22314 UBA1 P22314.S1044.p_UBA1 P22314_S1044s _1_1_1044_1044 P22314 P22314|P22314-2|Q5JRR6 Ubiquitin-like modifier-activating enzyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30096.30096.3 25.12 25.12 11.151 2 1 1 0 959.1096 2795.3429 S1044s TMT10 1033 (R) ALVLELCCNDEsGEDVEVPYVR (Y) ALVLELCCNDES(0.99)GEDVEVPY(0.0)VR C:Carbamidomethylation,s:Phosphorylated S UBA1 118930.9 4 11 289.1 381.86 HUMAN 1 0.8154 2.8705 ELDEEDNSSSSEEDR-p Q8N3X1-2;S965-p ELDEEDNSSSSEEDR 0.731724827574726 0.00417215414210897 0.049 0.751666666666667 2.57241101941528 35.01259507975 0.049 0.751666666666667 0.553042997877144 0.000315311994759244 0.632140680203922 8.0988513405757 Q8N3X1 FNBP4 Q8N3X1.2.S965.p_FNBP4 Q8N3X1-2_S965sS966s_2_2_965_966 Q8N3X1-2 Q8N3X1-2 Isoform 2 of Formin-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9263.9263.4 13.48 13.48 1.216 6 2 2 0 751.5661 2843.3067 S965s S966s TMT10 958 (R) ELDEEDNssSSEEDRESTAQK (R) ELDEEDNS(0.99)S(0.99)S(0.0)S(0.0)EEDRES(0.0)T(0.0)AQK K:TMT10,s:Phosphorylated S FNBP4 110905.5 3 17 405.1 325.34 HUMAN 1 2.5724 35.0126 ELDELMASLSDFKTS-p A0A1B0GTU4;S272-p ELDELMASLSDFKTS 0.579144591403601 0.166994173861778 -0.127 -0.242 4.36273625592688 10.224247417593 -0.127 -0.242 0.36620677475737 0.0949675552799201 -0.985862436089865 -2.01986069477301 A0A1B0GTU4 NotFound A0A1B0GTU4.S272.p_NotFound A0A1B0GTU4_S272s _1_1_272_272 A0A1B0GTU4 A0A1B0GTU4|A0A1B0GU60|P49023-3|F5GZ78|P49023-2|P49023-4 Paxillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33889.33889.3 15.78 15.16 2.638 2 1 1 0 679.3407 1956.04 S272s TMT10 265 (R) ELDELMAsLSDFK (T) ELDELMAS(0.99)LS(0.0)DFK K:TMT10,s:Phosphorylated S PXN 117843.4 6 11 288.1 382.57 HUMAN 1 -4.3627 -10.2242 ELDEVNKSAKKREGE-p Q03252;S134-p ELDEVNKSAKKREGE 0.513314534436529 0.109333006519697 0.087 0.185666666666667 5.35151134991615 12.6981198365267 0.0869608053019703 0.185666666666667 0.291641192259821 0.0537264340462868 1.16810206572369 2.45549936820654 Q03252 LMNB2 Q03252.S134.p_LMNB2 Q03252_S134s _1_1_134_134 Q03252 Q03252 Lamin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13809.13809.4 11.56 11.56 99 1 1 1 0 560.821 2160.2955 S134s TMT10 124 (K) LRAELDEVNKsAK (K) LRAELDEVNKS(1.0)AK K:TMT10,s:Phosphorylated S LMNB2 70061.3 4 23 440.2 312.01 HUMAN 1 5.3515 12.6981 ELDGKPASPTPVIVA-p P35606;S859-p ELDGKPASPTPVIVA 0.442299902006713 0.425449640752219 -0.105 -0.0893333333333333 6.52726405582687 4.93921126630883 -0.105 -0.0893333333333333 0.222471096029812 0.320685167643438 -1.37798212871553 -1.09268780608839 P35606 COPB2 P35606.S859.p_COPB2 P35606_S859s _1_1_859_859 P35606 P35606|P35606-2 Coatomer subunit beta' HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15600.15600.4 23.99 17.67 1.117 6 1 1 0 854.4619 3334.8574 S859s TMT10 847 (R) STAQQELDGKPAsPTPVIVASHTANK (E) S(0.0)T(0.0)AQQELDGKPAS(0.99)PT(0.0)PVIVAS(0.0)HT(0.0)ANK K:TMT10,s:Phosphorylated S COPB2 103341.1 42 3 2300.1 89.13 HUMAN 1 -6.5273 -4.9392 ELDKDDESLRKYKEA-p J3QQX2;S47-p ELDKDDESLRKYKEA 0.643336796258899 0.168057387369904 0.0636666666666667 0.184333333333333 3.58037625903662 10.1890636623141 0.0636666666666667 0.184333333333333 0.438492706504692 0.0957400464316707 0.836017240866909 2.01374550923048 J3QQX2 ARHGDIA J3QQX2.S47.p_ARHGDIA J3QQX2_S47s _1_1_47_47 J3QQX2 J3QQX2|P52565|P52565-2|J3KRE2|J3KS60 Rho GDP-dissociation inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17789.17789.4 13.7 13.7 8.64 2 1 1 0 704.1302 2733.5238 S47s TMT10 34 (K) SIQEIQELDKDDEsLRK (Y) S(0.0)IQEIQELDKDDES(0.99)LRK K:TMT10,s:Phosphorylated S ARHGDIA 25945 3 2 3480.1 49.97 HUMAN 1 3.5804 10.1891 ELDLRPPSPINLSRS-p Q5FWE3;S808-p ELDLRPPSPINLSRS 0.367808394356231 0.0699898453087814 0.127 0.217333333333333 8.05725836748486 15.3578753136021 0.127 0.217333333333333 0.156413474461317 0.0291214146821423 1.64509198278776 2.94386689086257 Q5FWE3 PRRT3 Q5FWE3.S808.p_PRRT3 Q5FWE3_S808s_1_1_808_808 Q5FWE3 Q5FWE3|Q5FWE3-2 Proline-rich transmembrane protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28087.28087.3 14.42 14.42 1.421 4 1 1 0 932.8211 2715.4991 N791n S808s TMT10 791 (R) nGVGPAPSLSELDLRPPsPINLSR (S) N(0.99)GVGPAPS(0.0)LS(0.0)ELDLRPPS(0.99)PIN(0.0)LS(0.0)R n:Deamidated,s:Phosphorylated S PRRT3 102765.9 5 3 931.1 199.28 HUMAN 1 8.0573 15.3579 ELDNNRHSKEEDPFN-p P42566;S595-p ELDNNRHSKEEDPFN 0.0775649771385732 0.541660762829365 -0.777333333333333 -0.213333333333333 23.7285952041036 3.58222707989529 -0.777333333333333 -0.213333333333333 0.00423780022399079 0.438305875086527 -4.7288098199179 -0.836248107958046 P42566 EPS15 P42566.S595.p_EPS15 P42566_S595s _1_1_595_595 P42566 P42566|B1AUU8|P42566-2 Epidermal growth factor receptor substrate 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6123.6123.4 9.39 7.8 2.297 2 1 1 0 499.9967 1917.0013 S595s TMT10 585 (K) VCSELDNNRHsK (E) VCS(0.0)ELDNNRHS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EPS15 99281.5 1 7 342.1 353.17 HUMAN 1 -23.7286 -3.5822 ELDQDMVTEDEDDPG-p Q9NRL2;T731-p ELDQDMVTEDEDDPG 0.0608497647854506 0.497917061296745 -0.458333333333333 0.144666666666667 26.5648624949657 4.05259600458946 -0.458333333333333 0.144666666666667 0.00220553396625136 0.393314900348475 -5.45134214057729 0.927011578177041 Q9NRL2 BAZ1A Q9NRL2.T731.p_BAZ1A Q9NRL2_T731t _1_1_731_731 Q9NRL2 Q9NRL2|Q9NRL2-2 Bromodomain adjacent to zinc finger domain protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13473.13473.3 24.23 20.6 10.893 2 1 1 0 866.7157 2518.1655 T731t TMT10 724 (K) ELDQDMVtEDEDDPGSHK (R) ELDQDMVT(0.99)EDEDDPGS(0.0)HK K:TMT10,t:Phosphorylated T BAZ1A 180353.8 7 4 567.1 270.71 HUMAN 1 -26.5649 4.0526 ELDSKTPTPPAPTLL-p Q14686;T1880-p ELDSKTPTPPAPTLL 0.724182100565663 0.0207264221823781 -0.109 0.447666666666667 2.65283755891148 23.0326140582865 -0.109 0.447666666666667 0.542895502820863 0.00497437582611739 -0.648972407537703 4.55702839931575 Q14686 NCOA6 Q14686.T1880.p_NCOA6 Q14686_T1880t _1_1_1880_1880 Q14686 Q14686 Nuclear receptor coactivator 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21762.21762.3 11.24 11.24 1.201 3 1 1 0 558.6598 1593.998 T1880t TMT10 1878 (K) TPtPPAPTLLK (M) T(0.0)PT(0.99)PPAPT(0.0)LLK K:TMT10,t:Phosphorylated T NCOA6 219484.1 1 12 327.1 360.02 HUMAN 1 -2.6528 23.0326 ELDSVMNSENDELNG-p Q96L73;S1143-p ELDSVMNSENDELNG 0.879740643172431 0.00993754173673578 -0.0356666666666667 -0.447333333333333 1.09485264736031 28.1560728117846 -0.0356666666666667 -0.447333333333333 0.777167687023582 0.00152894801284748 -0.297504855172653 -5.88156351399874 Q96L73 NSD1 Q96L73.S1143.p_NSD1 Q96L73_S1143s _1_1_1143_1143 Q96L73 Q96L73|Q96L73-3|Q96L73-2 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27401.27401.4 21.09 18.41 4.997 3 1 1 0 1046.7775 4104.1163 S1143s TMT10 1126 (K) GLSFENGKGPELDSVMNsENDELNGVNQVVPK (K) GLS(0.0)FENGKGPELDS(0.0)VMNS(0.99)ENDELNGVNQVVPK K:TMT10,s:Phosphorylated S NSD1 302295.2 2 9 601.1 263.26 HUMAN 1 -1.0949 -28.1561 ELEAHGVSESEGEER-p Q9BVJ6;S405-p ELEAHGVSESEGEER 0.680386456354124 0.498867798036352 -0.0573333333333333 0.0766666666666667 3.13618217715406 4.04065203596045 -0.0573333333333333 0.0766666666666667 0.485715298152936 0.394398083952581 -0.747939271770097 0.92473453956098 Q9BVJ6 UTP14A Q9BVJ6.S405.p_UTP14A Q9BVJ6_S405s _1_1_405_405 Q9BVJ6 Q9BVJ6|Q9BVJ6-3|Q9BVJ6-2 U3 small nucleolar RNA-associated protein 14 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23199.23199.5 24.66 20.98 1.6 3 1 1 0 885.8223 4345.1157 S405s TMT10 386 (K) EAATQEDPEQLPELEAHGVsESEGEERPVAEEEILLR (E) EAAT(0.0)QEDPEQLPELEAHGVS(0.99)ES(0.0)EGEERPVAEEEILLR s:Phosphorylated S UTP14A 88147.4 3 8 550.1 274.41 HUMAN 1 -3.1362 4.0407 ELEDGEISDDDNNSQ-p O60293;S28-p ELEDGEISDDDNNSQ 0.53128844186677 0.00448198400218091 0.148 0.813666666666667 5.08185247437905 34.4817864247955 0.148 0.813666666666667 0.310323562686578 0.00035630454114321 1.11903706650881 7.90537657475137 O60293 ZFC3H1 O60293.S28.p_ZFC3H1 O60293_S28s _1_1_28_28 O60293 O60293|O60293-2|G3V1X1|O60293-4 Zinc finger C3H1 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.12088.12088.3 19.03 19.03 5.865 2 1 1 0 858.3599 2493.1062 S28s TMT10 18 (K) EEGELEDGEIsDDDNNSQIR (S) EEGELEDGEIS(0.99)DDDNNS(0.0)QIR s:Phosphorylated S ZFC3H1 228291.3 1 2 311.1 371.67 HUMAN 1 5.0819 34.4818 ELEEENISLQKQVSV-p Q8TD16;S190-p ELEEENISLQKQVSV 0.932912367132036 0.183397422422996 -0.0163333333333333 -0.200333333333333 0.594619745452696 9.68887766108986 -0.0163333333333333 -0.200333333333333 0.872043251300518 0.107426699723404 -0.168854868252389 -1.92695283321213 Q8TD16 BICD2 Q8TD16.S190.p_BICD2 Q8TD16_S190s _1_1_190_190 Q8TD16 Q8TD16 Protein bicaudal D homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28290.28290.3 13.22 13.22 7.014 3 1 1 0 863.7742 2509.3438 S190s TMT10 177 (R) LLQDYSELEEENIsLQK (Q) LLQDY(0.0)S(0.0)ELEEENIS(0.99)LQK K:TMT10,s:Phosphorylated S BICD2 93759.7 1 1 1471.1 139.55 HUMAN 1 -0.5946 -9.6889 ELEHSQDTDADDGAL-p Q9UKM9-2;T282-p ELEHSQDTDADDGAL 0.0948633510902073 0.021817940509319 0.565666666666667 -0.326666666666667 21.721244371361 22.7084916096011 0.565666666666667 -0.326666666666667 0.00672783857860566 0.00535982782581507 4.25847444411244 -4.48091477361818 Q9UKM9 RALY Q9UKM9.2.T282.p_RALY Q9UKM9-2_T282t _1_1_282_282 Q9UKM9-2 Q9UKM9|Q9UKM9-2 Isoform 1 of RNA-binding protein Raly HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17871.17871.5 22.56 22.56 3.433 5 1 1 0 768.1294 3756.643 T282t TMT10 259 (R) TRDDGDEEGLLTHSEEELEHSQDtDADDGALQ (-) T(0.0)RDDGDEEGLLT(0.0)HS(0.0)EEELEHS(0.0)QDT(0.99)DADDGALQ t:Phosphorylated T RALY 30420.5 1 14 967.1 193.88 HUMAN 1 21.7212 -22.7085 ELEKLQLSDEESVFE-p Q86SQ0;S489-p ELEKLQLSDEESVFE 0.828315209558477 0.140212532208583 0.0476666666666667 0.179666666666667 1.57092437894483 11.2423535997788 0.0476666666666667 0.179666666666667 0.696478255640319 0.0751215672584503 0.411534391087624 2.19760719209568 Q86SQ0 PHLDB2 Q86SQ0.S489.p_PHLDB2 Q86SQ0_S489s _1_1_489_489 Q86SQ0 Q86SQ0|Q86SQ0-3|Q86SQ0-2|E9PGF6|G5E9V3 Pleckstrin homology-like domain family B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.34990.35611.3 23.5 23.5 2.229 4 1 1 0 869.07 2525.2279 S489s TMT10 486 (K) LQLsDEESVFEEALMSPDTR (Y) LQLS(0.99)DEES(0.0)VFEEALMS(0.0)PDT(0.0)R s:Phosphorylated S PHLDB2 142897.4 4 6 1231.1 163.76 HUMAN 1 1.5709 11.2424 ELEKLSLSEGGLVPS-p Q8WUX9;S431-p ELEKLSLSEGGLVPS 0.0574699311028016 0.207724670405263 -0.8 0.173 27.123283846281 8.97765876042973 -0.8 0.173 0.00193941886336435 0.126541833842117 -5.60243132608871 1.8038482549702 Q8WUX9 CHMP7 Q8WUX9.S431.p_CHMP7 Q8WUX9_S431s _1_1_431_431 Q8WUX9 Q8WUX9 Charged multivesicular body protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24626.24626.3 16.85 16.85 2.1 4 1 1 0 604.6679 1732.0257 S431s TMT10 428 (K) LSLsEGGLVPSSK (S) LS(0.0)LS(0.99)EGGLVPS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CHMP7 51195.3 1 3 1632.1 125.1 HUMAN 1 -27.1233 8.9777 ELEKPIQSKPQSPVI-p Q9Y6D5;S214-p ELEKPIQSKPQSPVI 0.913660770632355 0.74864043091369 0.019 -0.042 0.765766478315709 1.73700883979974 0.019 -0.042 0.838346107407375 0.670346144722583 0.214045340674499 -0.449689844094064 Q9Y6D5 ARFGEF2 Q9Y6D5.S214.p_ARFGEF2 Q9Y6D5_S214sS218sS227s_3_3_214_227 Q9Y6D5 Q9Y6D5 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21080.21080.5 10.22 10.22 99 3 3 3 0 721.1896 3362.0229 S214s S218s S227s TMT10 207 (R) ELEKPIQsKPQsPVIQAAAVsPK (F) ELEKPIQS(1.0)KPQS(1.0)PVIQAAAVS(1.0)PK K:TMT10,s:Phosphorylated S ARFGEF2 204545.1 2 20 205.1 448.88 HUMAN 1 0.7658 -1.737 ELENLQASYEDLKAQ-p O95613;S455-p ELENLQASYEDLKAQ 0.783485670526388 0.470876532049206 0.0393333333333333 0.076 2.03875118916614 4.36040354049532 0.0393333333333333 0.076 0.62535248660756 0.366403527351194 0.517366768338413 0.985245975545885 O95613 PCNT O95613.S455.p_PCNT O95613_S455s _1_1_455_455 O95613 O95613|O95613-2 Pericentrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25214.25214.3 13.89 13.89 4.1 2 1 1 0 777.7362 2251.2222 S455s TMT10 446 (K) QLELENLQAsYEDLK (A) QLELENLQAS(0.99)Y(0.0)EDLK K:TMT10,s:Phosphorylated S PCNT 380826.2 1 5 222.1 428 HUMAN 1 2.0388 4.3604 ELENWAGSM______-p Q9H444;S223-p ELENWAGSM______ 0.297184072075513 0.0805432903766592 -0.192666666666667 -0.205666666666667 9.92544888987813 14.512892400231 -0.192666666666667 -0.205666666666667 0.101731421042288 0.0353761657428633 -1.96876123790349 -2.78583722647577 Q9H444 CHMP4B Q9H444.S223.p_CHMP4B Q9H444_S223s _1_1_223_223 Q9H444 Q9H444 Charged multivesicular body protein 4b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20692.20692.4 21.23 15.04 99 1 1 1 0 820.9038 3200.6261 S223s TMT10 206 (K) KKEEEDDDMKELENWAGsM (-) KKEEEDDDMKELENWAGS(1.0)M K:TMT10,s:Phosphorylated S CHMP4B 24949.7 5 2 2996.1 63.7 HUMAN 1 -9.9254 -14.5129 ELENYRLSLRQAEAL-p Q7RTP6;S899-p ELENYRLSLRQAEAL 0.118247229564978 0.0504453174132814 -0.508333333333333 -0.501 19.2941936484063 17.3333347413131 -0.508333333333333 -0.501 0.0117646939867619 0.0184784919835075 -3.72908726057596 -3.32598229485809 Q7RTP6 MICAL3 Q7RTP6.S899.p_MICAL3 Q7RTP6_S899s _1_1_899_899 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18522.18522.4 14.65 14.65 8.867 3 1 1 0 564.5501 2175.2083 S899s TMT10 886 (R) GTPERIELENYRLsLR (Q) GT(0.0)PERIELENY(0.0)RLS(0.99)LR s:Phosphorylated S MICAL3 225431.9 3 4 190.1 466.81 HUMAN 1 -19.2942 -17.3333 ELEPERNSKNWEEII-p O14646;S1040-p ELEPERNSKNWEEII 0.283177951218012 0.676113012034813 -0.172 -0.057 10.3564385939475 2.3213139316892 -0.172 -0.057 0.0921204690519595 0.585960858780015 -2.0437098162202 -0.578768111912262 O14646 CHD1 O14646.S1040.p_CHD1 O14646_S1040s _1_1_1040_1040 O14646 O14646|O14646-2 Chromodomain-helicase-DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21453.21453.3 16.32 16.32 4.865 2 1 1 0 997.4661 2910.4191 S1040s TMT10 1021 (K) VANFSNMDEDDIELEPERNsK (N) VANFS(0.0)NMDEDDIELEPERNS(0.99)K K:TMT10,s:Phosphorylated S CHD1 197825.1 3 3 848.1 212.75 HUMAN 1 -10.3564 -2.3213 ELERAFGYYGPLRSV-p P84103;Y32-p ELERAFGYYGPLRSV 0.763958217078772 0.148903823333033 0.047 0.154 2.24209763286916 10.8878983242013 0.047 0.154 0.596746989472483 0.0815098638247555 0.561772988134526 2.13552993515648 P84103 SRSF3 P84103.Y32.p_SRSF3 P84103_Y32y _1_1_32_32 P84103 P84103|P84103-2|A0A087X2D0 Serine/arginine-rich splicing factor 3 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.23033.23072.2 15.29 7.26 1.297 2 1 1 0 676.8333 1272.6938 Y32y TMT10 29 (R) AFGyYGPLR (S) AFGY(0.99)Y(0.0)GPLR y:Phosphorylated Y SRSF3 19557.5 2 1 235.1 15.29 HUMAN 1 2.2421 10.8879 ELESSVPSPVPAITV-p A0A1B0GTU4;S230-p ELESSVPSPVPAITV 0.865428128359002 0.619098505629737 -0.0263333333333333 0.0536666666666667 1.22064041945755 2.83001527298427 -0.0263333333333333 0.0536666666666667 0.754980888442347 0.521192878204834 -0.328343401758476 0.685576684517264 A0A1B0GTU4 NotFound A0A1B0GTU4.S230.p_NotFound A0A1B0GTU4_S230s _1_1_230_230 A0A1B0GTU4 A0A1B0GTU4|A0A1B0GU60|P49023-3|F5GZ78|P49023-2|P49023-4 Paxillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36885.36885.5 27.35 27.35 4.643 8 1 1 0 892.4453 4378.2285 S230s TMT10 209 (R) GLEDVRPSVESLLDELESSVPsPVPAITVNQGEMSSPQR (V) GLEDVRPS(0.0)VES(0.0)LLDELES(0.0)S(0.0)VPS(0.99)PVPAIT(0.0)VNQGEMS(0.0)S(0.0)PQR s:Phosphorylated S PXN 117843.4 28 8 288.1 382.57 HUMAN 1 -1.2206 2.83 ELEVQKGSLGISQEE-p Q9NZD8;S300-p ELEVQKGSLGISQEE 0.141052447406801 0.582529618353971 0.366666666666667 -0.0586666666666666 17.3892827917707 3.16804737965105 0.366666666666667 -0.0586666666666666 0.0182419693134294 0.482164533665243 3.33970506094641 -0.754233432060625 Q9NZD8 SPG21 Q9NZD8.S300.p_SPG21 Q9NZD8_S300s _1_1_300_300 Q9NZD8 Q9NZD8|Q9NZD8-2|H3BRR0 Maspardin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29271.29271.3 16.16 16.16 1.148 5 1 1 0 1182.9155 3466.7664 S300s TMT10 281 (K) YAAIDPSMVSAEELEVQKGsLGISQEEQ (-) Y(0.0)AAIDPS(0.0)MVS(0.0)AEELEVQKGS(0.99)LGIS(0.0)QEEQ K:TMT10,s:Phosphorylated S SPG21 35244.8 3 2 4418.1 31.74 HUMAN 1 17.3893 -3.168 ELFALHPSPDEEEPI-p Q96N67-6;S241-p ELFALHPSPDEEEPI 0.0839257825395841 0.0119943719830303 -0.362 -0.479333333333333 23.0034536461095 26.8360545049486 -0.362 -0.479333333333333 0.0050078883223104 0.00207202289323562 -4.55524385877137 -5.51678020923322 Q96N67 DOCK7 Q96N67.6.S241.p_DOCK7 Q96N67-6_S241s _1_1_241_241 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3|Q96N67-4 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21705.21705.3 12.35 12.35 99 1 1 1 0 773.0362 2237.1287 S241s TMT10 234 (K) ELFALHPsPDEEEPIER (L) ELFALHPS(1.0)PDEEEPIER s:Phosphorylated S DOCK7 243551.1 1 7 345.1 352.4 HUMAN 1 -23.0035 -26.8361 ELFASALSNDLLQNC-p E7ETA6;S180-p ELFASALSNDLLQNC 0.827047603903646 0.0304845081495305 0.0333333333333333 -0.34 1.58855057880215 20.4871386625429 0.0333333333333333 -0.34 0.693657269652209 0.00893894229562577 0.415624559187944 -3.98044329074992 E7ETA6 PCM1 E7ETA6.S180.p_PCM1 E7ETA6_S180s _1_1_180_180 E7ETA6 E7ETA6|Q15154-2|A6NNN6|Q15154-3|E9PGW9 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27100.27100.4 23.41 23.41 3.79 6 1 1 0 1069.7482 4196.0073 S180s TMT10 173 (K) ELFASALsNDLLQNCQVSEEDGRGEPAMESSQIVSR (L) ELFAS(0.0)ALS(0.99)NDLLQNCQVS(0.0)EEDGRGEPAMES(0.0)S(0.0)QIVS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PCM1 229381.8 3 9 13.1 1159.95 HUMAN 1 1.5886 -20.4871 ELFDDPSYVNVQNLD-p P29353-7;Y318-p ELFDDPSYVNVQNLD 0.43852445021401 0.131627159332459 -0.188 0.199 6.59289257752784 11.6105345622474 -0.188 0.199 0.219134492452565 0.0690154849172634 -1.38954560868776 2.26235261913549 P29353 SHC1 P29353.7.Y318.p_SHC1 P29353-7_Y318y _1_1_318_318 P29353-7 P29353-6|P29353-7|P29353-2|P29353-3|P29353-5|X6R6D0 Isoform 7 of SHC-transforming protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25611.25611.3 22 22 3.871 2 1 1 0 812.0686 2354.228 Y318y TMT10 311 (R) ELFDDPSyVNVQNLDK (A) ELFDDPS(0.0)Y(0.99)VNVQNLDK K:TMT10,y:Phosphorylated Y SHC1 52137.1 2 5 2336.1 87.32 HUMAN 1 -6.5929 11.6105 ELFGHGRTTDLSKGL-p A0A087WZY3;T2553-p ELFGHGRTTDLSKGL 0.68132048251407 0.0218135180246526 -0.157333333333333 0.408666666666667 3.12693469380399 22.7101077919562 -0.157333333333333 0.408666666666667 0.486750639326068 0.00535783359197218 -0.746078324655568 4.48129226081699 A0A087WZY3 NotFound A0A087WZY3.T2553.p_NotFound A0A087WZY3_T2553t _1_1_2553_2553 A0A087WZY3 A0A087WZY3|Q8TCU4|A0A087WTU9|Q8TCU4-2|A0A087WV20|Q8TCU4-3 Alstrom syndrome protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25951.25951.3 7.27 6.83 5.527 3 1 1 0 614.3111 1760.9493 T2553t Hydrogen 2545 (K) AELFGHGRtTDLSK (G) AELFGHGRT(0.99)T(0.0)DLS(0.0)K K:TMT10-Lys-Only,t:Phosphorylated T ALMS1 463449.8 1 8 1397.1 146.67 HUMAN 1 -3.1269 22.7101 ELFHQQGTPRASNRS-p P20700;T575-p ELFHQQGTPRASNRS 0.831427040191162 0.454960520576408 -0.0346666666666667 -0.0846666666666667 1.54412082189668 4.55919036540866 -0.0346666666666667 -0.0846666666666667 0.700790035207731 0.350010411726475 -0.40529792961715 -1.02242859993482 P20700 LMNB1 P20700.T575.p_LMNB1 P20700_T575t _1_1_575_575 P20700 P20700 Lamin-B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30005.30005.4 27.46 22.79 27.465 5 1 1 0 1128.7975 4432.2084 T575t TMT10 543 (R) STVFKTTIPEEEEEEEEAAGVVVEEELFHQQGtPR (A) S(0.0)T(0.0)VFKT(0.0)T(0.0)IPEEEEEEEEAAGVVVEEELFHQQGT(0.99)PR K:TMT10,t:Phosphorylated T LMNB1 66692.5 9 17 440.1 312.01 HUMAN 1 -1.5441 -4.5592 ELFLNKESPHEPDPE-p Q96QC0;S503-p ELFLNKESPHEPDPE 0.394738031323427 0.165537861622681 -0.121666666666667 0.289333333333333 7.45027165532526 10.2711951612537 -0.121666666666667 0.289333333333333 0.179875839756277 0.0939464738003457 -1.53962317235841 2.02802291223771 Q96QC0 PPP1R10 Q96QC0.S503.p_PPP1R10 Q96QC0_S503s _1_1_503_503 Q96QC0 Q96QC0 Serine/threonine-protein phosphatase 1 regulatory subunit 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30810.30810.5 17.1 12.74 10.238 2 1 1 0 777.0161 3801.0718 S503s TMT10 492 (K) GILQELFLNKEsPHEPDPEPYEPIPPK (L) GILQELFLNKES(0.99)PHEPDPEPY(0.0)EPIPPK K:TMT10,s:Phosphorylated S PPP1R10 99398.3 1 6 592.1 264.27 HUMAN 1 -7.4503 10.2712 ELFQTPGTDKPTTDE-p P46013;T2328-p ELFQTPGTDKPTTDE 0.65460083886851 0.00921472594365585 0.0643333333333333 -0.553666666666667 3.44888444616161 28.7656757914768 0.0643333333333333 -0.553666666666667 0.451972025605242 0.0013287167837549 0.810199922183331 -6.05610966333653 P46013 MKI67 P46013.T2328.p_MKI67 P46013_T2325tT2328t_2_2_2325_2328 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19095.19095.4 13.67 13.67 5.799 4 2 2 0 664.3295 2494.3644 T2325t T2328t TMT10 2321 (K) ELFQtPGtDKPTTDEK (T) ELFQT(0.99)PGT(0.99)DKPT(0.0)T(0.0)DEK K:TMT10,t:Phosphorylated T MKI67 360912.4 2 110 5.1 1918.46 HUMAN 1 3.4489 -28.7657 ELGKPRQSPLTYEDH-p Q9Y618;S1547-p ELGKPRQSPLTYEDH 0.211309876563391 0.990324797150279 0.2 0.00166666666666667 13.0313042506176 0.062150249382335 0.2 0.00166666666666666 0.0497587629607286 0.985791286488723 2.51670931423832 0.0186448771304725 Q9Y618 NCOR2 Q9Y618.S1547.p_NCOR2 Q9Y618_S1547s _1_1_1547_1547 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20670.20670.5 19.64 20.16 1.236 3 1 1 0 789.8246 3865.1277 S1547s TMT10 1533 (R) GAPVIVPELGKPRQsPLTYEDHGAPFAGHLPR (G) GAPVIVPELGKPRQS(0.99)PLT(0.0)Y(0.0)EDHGAPFAGHLPR K:TMT10,s:Phosphorylated S NCOR2 275540.8 5 24 16.1 1053.89 HUMAN 1 13.0313 0.0622 ELGLHECSLPVSPLG-p Q96MT8-2;S491-p ELGLHECSLPVSPLG 0.839442217239864 0.138123156165408 0.0336666666666667 0.199 1.46810394575901 11.3264893658667 0.0336666666666666 0.199 0.713164317318629 0.0736802453588662 0.387499155757253 2.21237769213379 Q96MT8 CEP63 Q96MT8.2.S491.p_CEP63 Q96MT8-2_S491sS495s_2_2_491_495 Q96MT8-2 Q96MT8-2|Q96MT8-3 Isoform 2 of Centrosomal protein of 63 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30412.30412.3 15.91 15.91 2.747 4 2 2 0 880.1001 2478.3588 S491s S495s TMT10 483 (K) LELGLHECsLPVsPLGSIATR (F) LELGLHECS(0.99)LPVS(0.99)PLGS(0.0)IAT(0.0)R C:Carbamidomethylation,s:Phosphorylated S CEP63 63412.8 2 2 4509.1 30.5 HUMAN 1 1.4681 11.3265 ELGNKPPTPPLHQFS-p Q9ULM0;T412-p ELGNKPPTPPLHQFS 0.958491073370422 0.887481574249929 0.00766666666666665 0.0196666666666667 0.35759101488149 0.729443173479224 0.00766666666666665 0.0196666666666667 0.92096027693061 0.845387228727852 0.103940581840259 0.204544208270827 Q9ULM0 PLEKHH1 Q9ULM0.T412.p_PLEKHH1 Q9ULM0_T412t _1_1_412_412 Q9ULM0 Q9ULM0 Pleckstrin homology domain-containing family H member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28406.28406.4 18.68 18.68 9.061 4 1 1 0 939.9792 3676.9375 T412t TMT10 396 (K) ALGAELEEVELGNKPPtPPLHQFSSWESR (I) ALGAELEEVELGNKPPT(0.99)PPLHQFS(0.0)S(0.0)WES(0.0)R K:TMT10,t:Phosphorylated T PLEKHH1 152827.1 1 9 981.1 192.43 HUMAN 1 0.3576 0.7294 ELGPWGDSLEETGAA-p Q8IVF2;S365-p ELGPWGDSLEETGAA 0.536717349835871 0.0550088980333294 0.098 -0.344666666666667 4.99981027525113 16.7820438207542 0.098 -0.344666666666667 0.316241580961882 0.0209795233996033 1.10402333611057 -3.21741640963005 Q8IVF2 AHNAK2 Q8IVF2.S365.p_AHNAK2 Q8IVF2_S365s _1_1_365_365 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29019.29019.3 22.26 22.26 4.2 4 1 1 0 904.431 2631.31 S365s TMT10 353 (R) AGVLEELGPWGDsLEETGAATGSR (R) AGVLEELGPWGDS(0.99)LEET(0.0)GAAT(0.0)GS(0.0)R s:Phosphorylated S AHNAK2 617759.6 1 5 237.1 418.35 HUMAN 1 4.9998 -16.782 ELGSARRSGEVTLTK-p A2ABF9;S303-p ELGSARRSGEVTLTK 0.205371202525509 0.0574349929878372 -0.246 -0.476333333333333 13.2923212336857 16.5321629407582 -0.246 -0.476333333333333 0.0468562875935157 0.0222220287905415 -2.56387750334776 -3.16871791391235 A2ABF9 EHMT2 A2ABF9.S303.p_EHMT2 A2ABF9_S303s _1_1_303_303 A2ABF9 A2ABF9|A0A0G2JK64|A2ABF8|A0A0G2JIR1 Histone-lysine N-methyltransferase EHMT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17073.17073.4 17.6 17.6 1.201 6 1 1 0 739.8943 2876.5842 S303s TMT10 287 (K) LNSGGGLSEELGSARRsGEVTLTK (G) LNS(0.0)GGGLS(0.0)EELGS(0.0)ARRS(0.99)GEVT(0.0)LT(0.0)K K:TMT10,s:Phosphorylated S EHMT2 141220.9 4 9 719.1 237.26 HUMAN 1 -13.2923 -16.5322 ELGTDLLSQLSLEDQ-p Q9UQE7;S787-p ELGTDLLSQLSLEDQ 0.139587060589669 0.0135649676192373 -0.663333333333333 0.499666666666667 17.5018477944209 25.954906334547 -0.663333333333334 0.499666666666667 0.0177752296574059 0.00253810372533567 -3.36214115532943 5.2828379310185 Q9UQE7 SMC3 Q9UQE7.S787.p_SMC3 Q9UQE7_S787s _1_1_787_787 Q9UQE7 Q9UQE7 Structural maintenance of chromosomes protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31558.31558.3 17.03 17.03 2.572 3 1 1 0 800.0874 2318.2855 S787s TMT10 779 (K) AELGTDLLsQLSLEDQK (R) AELGT(0.0)DLLS(0.99)QLS(0.0)LEDQK K:TMT10,s:Phosphorylated S SMC3 141938.5 1 2 1472.1 139.47 HUMAN 1 -17.5018 25.9549 ELGWRPHSWHATKFS-p Q13796;S116-p ELGWRPHSWHATKFS 0.908443303300714 0.359507513615441 -0.029 0.106666666666667 0.820131639423854 5.89423536618077 -0.029 0.106666666666667 0.827917068257021 0.257380987836632 -0.228131155654008 1.26540343500445 Q13796 SHROOM2 Q13796.S116.p_SHROOM2 Q13796_S116s _1_1_116_116 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12347.12347.4 8.7 8.7 7.214 3 1 1 0 558.29 2150.166 S116s TMT10 108 (R) SELGWRPHsWHATK (F) S(0.0)ELGWRPHS(0.99)WHAT(0.0)K K:TMT10,s:Phosphorylated S SHROOM2 177605.1 1 1 90.1 622.62 HUMAN 1 -0.8201 5.8942 ELHDRLLSAERAVTG-p Q15149;S3900-p ELHDRLLSAERAVTG 0.437656541475657 0.103516202520673 -0.127666666666667 -0.192 6.61127175993397 13.0123193904648 -0.127666666666667 -0.192 0.218209082887871 0.0499767558134891 -1.39278167108942 -2.51190730011008 Q15149 PLEC Q15149.S3900.p_PLEC Q15149_S3900s _1_1_3900_3900 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16797.16797.3 13.48 13.48 99 1 1 1 0 691.0351 1991.1235 S3900s TMT10 3888 (K) GLVGPELHDRLLsAER (A) GLVGPELHDRLLS(1.0)AER s:Phosphorylated S PLEC 533778 1 29 44.1 794.85 HUMAN 1 -6.6113 -13.0123 ELHLPLNSPLPGSEL-p Q9UL03;S150-p ELHLPLNSPLPGSEL 0.364278922725023 0.43999873639637 -0.208333333333333 0.0996666666666667 8.13802834758622 4.7495185432704 -0.208333333333333 0.0996666666666667 0.153531384134434 0.335002575320305 -1.65909669112281 1.05774473894879 Q9UL03 INTS6 Q9UL03.S150.p_INTS6 Q9UL03_S150s _1_1_150_150 Q9UL03 Q9UL03|Q9UL03-3 Integrator complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28990.28990.4 18.95 14.31 7.433 7 1 1 0 822.1937 3205.772 S150s TMT10 134 (K) LTTTSGVQDELHLPLNsPLPGSELTK (E) LT(0.0)T(0.0)T(0.0)S(0.0)GVQDELHLPLNS(0.99)PLPGS(0.0)ELT(0.0)K K:TMT10,s:Phosphorylated S INTS6 101015.9 3 1 4166.1 36.38 HUMAN 1 -8.138 4.7495 ELHPQLLSPTKAGPR-p Q8TBN0;S179-p ELHPQLLSPTKAGPR 0.527332702132588 0.00914702318785666 0.138 -0.527333333333333 5.14380132318187 28.8365562656059 0.138 -0.527333333333333 0.305928450945928 0.00130720702597277 1.13034632579698 -6.07666269021576 Q8TBN0 RAB3IL1 Q8TBN0.S179.p_RAB3IL1 Q8TBN0_S179s _1_1_179_179 Q8TBN0 Q8TBN0 Guanine nucleotide exchange factor for Rab-3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16798.16798.3 12.27 12.27 2.622 2 1 1 0 601.0049 1721.0362 S179s TMT10 172 (R) ELHPQLLsPTK (A) ELHPQLLS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S RAB3IL1 43206.4 2 2 4818.1 26.29 HUMAN 1 5.1438 -28.8366 ELHYEEGSPRNLGTP-p O14523;S411-p ELHYEEGSPRNLGTP 0.290884494360713 0.73649848922455 0.165 0.0323333333333334 10.1100379883383 1.831094773801 0.165 0.0326730207162581 0.097498110938563 0.655979885404462 2.00083447357725 0.471010097243879 O14523 C2CD2L O14523.S411.p_C2CD2L O14523_S411s _1_1_411_411 O14523 O14523-2|E9PK05 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22321.22538.3 25.8 25.8 5.827 3 1 1 0 803.3884 2328.1855 S411s TMT10 394 (K) ALGPAATMAVELHYEEGsPR (N) ALGPAAT(0.0)MAVELHY(0.0)EEGS(0.99)PR s:Phosphorylated S C2CD2L 76636.4 6 7 411.1 322.51 HUMAN 1 10.11 1.8311 ELIKRAESLSRSRKG-p Q9BPX7-2;S81-p ELIKRAESLSRSRKG 0.479997452313128 0.00933164146131915 -0.121 -0.546 5.86845462020275 28.6574412675054 -0.121 -0.546 0.258913406055887 0.00136224704107365 -1.26109421912634 -6.02482974531697 Q9BPX7 C7orf25 Q9BPX7.2.S81.p_C7orf25 Q9BPX7-2_S81s _1_1_81_81 Q9BPX7-2 Q9BPX7-2 Isoform 2 of UPF0415 protein C7orf25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3800.3800.3 8.26 8.26 1.476 2 1 1 0 376.5305 1047.6108 S81s TMT10 78 (K) RAEsLSR (S) RAES(0.99)LS(0.0)R s:Phosphorylated S C7orf25 52853.4 1 1 3562.1 48.23 HUMAN 1 -5.8685 -28.6574 ELILSPRSKESVPEF-p P16949;S28-p ELILSPRSKESVPEF 0.146754915601182 0.199167205736452 -0.271333333333333 0.208 16.9332087664477 9.22131166082046 -0.271333333333333 0.208 0.0202618512801565 0.119637914503306 -3.24949124080893 1.84599795081258 P16949 STMN1 P16949.S28.p_STMN1 P16949_S28s _1_1_28_28 P16949 P16949-2 Stathmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21147.21147.3 17.49 17.49 1.159 3 1 1 0 638.3413 1833.0432 S28s Hydrogen 15 (R) ASGQAFELILSPRsK (E) AS(0.0)GQAFELILS(0.0)PRS(0.99)K K:TMT10-Lys-Only,s:Phosphorylated S STMN1 17302.2 2 4 690.1 243.18 HUMAN 1 -16.9332 9.2213 ELINNMWTDFCVEDY-p Q3B820-3;T204-p ELINNMWTDFCVEDY 0.985102205736535 0.24505245873321 0.00366666666666666 0.120666666666667 0.130736716742014 8.04774510487522 0.00366666666666664 0.120666666666667 0.970345348460188 0.156756475225277 0.0389257788845432 1.64291810350896 Q3B820 FAM161A Q3B820.3.T204.p_FAM161A Q3B820-3_T193tT204tY211y_3_3_193_211 Q3B820-3 Q3B820-3|Q3B820-2 Isoform 3 of Protein FAM161A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29981.29981.4 7.39 1.9 1.455 4 3 3 0 1044.4606 3918.9328 T193t M202m T204t Y211y TMT10 191 (R) MMtYAKELINNmWtDFCVEDyIRCK (D) M(0.0)M(0.0)T(0.99)Y(0.0)AKELINNM(0.99)WT(0.99)DFCVEDY(0.99)IRCK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,m:Oxidized methionine,y:Phosphorylated Y FAM161A 84231.8 1 4 4058.1 38.46 HUMAN 1 0.1307 8.0477 ELKAALQSQENLIHE-p Q96MT8-2;S278-p ELKAALQSQENLIHE 0.689454359376595 0.336590606253654 0.0573333333333333 -0.0943333333333333 3.02799799733103 6.26621610132783 0.0573333333333333 -0.0943333333333333 0.497966583792546 0.23625357547439 0.726093292121464 -1.33152235034442 Q96MT8 CEP63 Q96MT8.2.S278.p_CEP63 Q96MT8-2_S278s _1_1_278_278 Q96MT8-2 Q96MT8|Q96MT8-2|Q96MT8-3|Q96MT8-4 Isoform 2 of Centrosomal protein of 63 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12838.12838.3 14.59 14.59 99 1 1 1 0 630.3224 1808.9816 S278s TMT10 274 (K) AALQsQENLIHEAR (I) AALQS(1.0)QENLIHEAR s:Phosphorylated S CEP63 63412.8 1 1 4509.1 30.5 HUMAN 1 3.028 -6.2662 ELKAQGETDLPPGVL-p Q6AWC2-6;T1130-p ELKAQGETDLPPGVL 0.632931650008771 0.859418919060935 0.132333333333333 0.0213333333333333 3.70186253278074 0.927242772105822 0.132333333333333 0.0213333333333333 0.426396613417194 0.807747686456906 0.859693358480096 0.255502207330149 Q6AWC2 WWC2 Q6AWC2.6.T1130.p_WWC2 Q6AWC2-6_T1130t_1_1_1130_1130 Q6AWC2-6 Q6AWC2-6|Q6AWC2-4|Q6AWC2-2|Q6AWC2-3|Q6AWC2-7 Isoform 6 of Protein WWC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8780.8780.5 8.37 4.51 99 1 1 1 0 623.9331 3052.6567 Q1119q T1130t Hydrogen 1119 (R) qKLEELKAQGEtDLPPGVLEDER (F) Q(1.0)KLEELKAQGET(1.0)DLPPGVLEDER K:TMT10-Lys-Only,q:Pyroglutamic acid,t:Phosphorylated T WWC2 137930.4 2 9 1158.1 171.22 HUMAN 1 3.7019 0.9272 ELKATLPSPDKLPGF-p P22314;S835-p ELKATLPSPDKLPGF 0.603627572916075 0.045408253461249 -0.085 0.263666666666667 4.04785590958855 17.9679686992427 -0.085 0.263666666666667 0.393744417153479 0.01596625753258 -0.926266313523684 3.45296516811559 P22314 UBA1 P22314.S835.p_UBA1 P22314_S835s _1_1_835_835 P22314 P22314|P22314-2|Q5JRR6 Ubiquitin-like modifier-activating enzyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23226.23226.2 12.63 12.63 4.197 2 1 1 0 1069.6178 2058.2566 S835s TMT10 831 (K) ATLPsPDKLPGFK (M) AT(0.0)LPS(0.99)PDKLPGFK K:TMT10,s:Phosphorylated S UBA1 118930.9 3 10 289.1 381.86 HUMAN 1 -4.0479 17.968 ELKDDAQSVETLGKP-p Q8WYP5-2;S2216-p ELKDDAQSVETLGKP 0.575331817356709 0.05155187738701 0.076 0.337666666666667 4.41492105130095 17.1880144172826 0.076 0.337666666666667 0.361832768289335 0.0191072663798929 0.995656703536228 3.29721080397208 Q8WYP5 AHCTF1 Q8WYP5.2.S2216.p_AHCTF1 Q8WYP5-2_S2216s _1_1_2216_2216 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20405.20405.5 10.77 10.77 2.298 2 1 1 0 717.4047 3503.0341 S2216s TMT10 2204 (K) NKLEDELKDDAQsVETLGKPK (A) NKLEDELKDDAQS(0.99)VET(0.0)LGKPK K:TMT10,s:Phosphorylated S AHCTF1 258049.6 1 36 40.1 829.79 HUMAN 1 4.4149 17.188 ELKDTSRSDESPKPG-p Q9NQW6;S639-p ELKDTSRSDESPKPG 0.256402719930484 0.00601712987960367 0.658 -1.18766666666667 11.2293957421225 32.0742030500108 0.658 -1.18766666666667 0.0753460389542727 0.000620268455273973 2.19634728069827 -7.07663379716719 Q9NQW6 ANLN Q9NQW6.S639.p_ANLN Q9NQW6_S639s _1_1_639_639 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5036.5036.4 10.4 10.4 1.132 4 1 1 0 543.5388 2091.1649 S639s TMT10 635 (K) DTSRsDESPKPGK (F) DT(0.0)S(0.0)RS(0.99)DES(0.0)PKPGK K:TMT10,s:Phosphorylated S ANLN 125566 7 42 68.1 675.08 HUMAN 1 11.2294 -32.0742 ELKEKEYSVLNAVDQ-p P46939;S2615-p ELKEKEYSVLNAVDQ 0.783485670526388 0.299480604715288 -0.04 0.124666666666667 2.03751781873467 6.91301033959794 -0.04 0.124666666666667 0.625530108205301 0.203563057839061 -0.517094691523151 1.44538301575043 P46939 UTRN P46939.S2615.p_UTRN P46939_S2615s _1_1_2615_2615 P46939 P46939-2|P46939-4|Q5T097 Utrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17709.17709.3 14.59 14.59 14.587 2 1 1 0 720.7099 2080.1439 S2615s TMT10 2611 (K) EKEYsVLNAVDQAR (V) EKEY(0.0)S(0.99)VLNAVDQAR K:TMT10,s:Phosphorylated S UTRN 396684.3 3 13 527.1 282.18 HUMAN 1 -2.0375 6.913 ELKGKRGSDYETFKN-p Q6NUM9;S484-p ELKGKRGSDYETFKN 0.0468473421814984 0.0138752131194156 -0.836666666666667 -0.362333333333333 29.5346885024614 25.7896022197425 -0.836666666666667 -0.362333333333333 0.00111309222643291 0.00263657286451049 -6.29179131426141 -5.2397681908251 Q6NUM9 RETSAT Q6NUM9.S484.p_RETSAT Q6NUM9_S484s _1_1_484_484 Q6NUM9 Q6NUM9 All-trans-retinol 13,14-reductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9676.9676.4 12.89 11.08 3.5 3 1 1 0 514.5278 1975.1216 S484s TMT10 480 (K) GKRGsDYETFK (N) GKRGS(0.99)DY(0.0)ET(0.0)FK K:TMT10,s:Phosphorylated S RETSAT 67502.9 6 1 4073.1 38.14 HUMAN 1 -29.5347 -25.7896 ELKGRGEYFAIKALK-p Q05655;Y374-p ELKGRGEYFAIKALK 0.791982821171237 0.112230531293678 -0.0373333333333333 0.167 1.95348298521478 12.5318409409345 -0.0373333333333334 0.167 0.637751812387891 0.0558233513680152 -0.498475692601575 2.42576536265314 Q05655 PRKCD Q05655.Y374.p_PRKCD Q05655_Y374y _1_1_374_374 Q05655 Q05655-2 Protein kinase C delta type GG20160819_MSz_CCLE_T4D7_pY_Injection_01.15975.15975.3 11.77 4.76 99 1 1 1 0 526.9536 1498.8782 Y374y TMT10 370 (K) GRGEyFAIK (A) GRGEY(1.0)FAIK K:TMT10,y:Phosphorylated Y PRKCD 78701.8 2 4 10.1 97.65 HUMAN 1 -1.9535 12.5318 ELKKRRLSDKGLKAE-p Q00839;S26-p ELKKRRLSDKGLKAE 0.0977397848374227 0.00174478258667001 3.57466666666667 -2.856 21.3833177244553 43.6374811944162 3.57466666666667 -2.856 0.00727224040900983 4.32764751614852e-05 4.18231642244019 -16.0628132906879 Q00839 HNRNPU Q00839.S26.p_HNRNPU Q00839_S26s _1_1_26_26 Q00839 Q00839|Q00839-2|A0A1W2PPS1|A0A1X7SBS1 Heterogeneous nuclear ribonucleoprotein U HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7481.7481.3 7.78 7.78 99 1 1 1 0 485.6217 1374.8833 S26s Hydrogen 24 (R) RLsDKGLK (A) RLS(1.0)DKGLK K:TMT10-Lys-Only,s:Phosphorylated S HNRNPU 91324.5 2 2 657.1 253.07 HUMAN 1 21.3833 -43.6375 ELKQEVISTSSKAEP-p P63244;S276-p ELKQEVISTSSKAEP 0.336003398897719 0.385116467085209 -0.284 0.1 8.83331717926855 5.50866487720171 -0.284 0.1 0.13081823401804 0.281276540736003 -1.7795097284736 1.19624788889186 P63244 GNB2L1 P63244.S276.p_GNB2L1 P63244_S276s _1_1_276_276 P63244 P63244|J3KPE3|D6RAC2|D6RF23 Receptor of activated protein C kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29644.29644.3 17.23 17.23 1.153 4 1 1 0 852.8214 2476.4841 S276s TMT10 265 (K) IIVDELKQEVIsTSSK (A) IIVDELKQEVIS(0.99)T(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S RACK1 35532.5 2 5 2731.1 72.44 HUMAN 1 -8.8333 5.5087 ELKSEINSLKGLLLN-p O75381;S218-p ELKSEINSLKGLLLN 0.199328979709786 0.704375589041621 -0.342333333333333 -0.062 13.6311727087055 2.09060794301442 -0.342333333333333 -0.062 0.0433393834913536 0.617929893753272 -2.62544712375574 -0.528713192156821 O75381 PEX14 O75381.S218.p_PEX14 O75381_S218s _1_1_218_218 O75381 O75381 Peroxisomal membrane protein PEX14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12460.12460.2 8.45 2.63 2.803 2 1 1 0 664.8649 1248.7564 S218s TMT10 214 (K) SEINsLK (G) S(0.0)EINS(0.99)LK K:TMT10,s:Phosphorylated S PEX14 41292.9 1 3 1445.1 141.13 HUMAN 1 -13.6312 -2.0906 ELKTVTFSKL_____-p Q13011;S326-p ELKTVTFSKL_____ 0.211309876563391 0.155184232790565 0.201 0.199666666666667 13.0318349937749 10.6411415409567 0.201 0.199666666666667 0.0497526824069987 0.0862751744079722 2.51680500379848 2.09244472390243 Q13011 ECH1 Q13011.S326.p_ECH1 Q13011_S326s _1_1_326_326 Q13011 Q13011 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23478.23478.2 8.11 8.11 1.121 3 1 1 0 667.3826 1253.7869 S326s TMT10 322 (K) TVTFsKL (-) T(0.0)VT(0.0)FS(0.99)KL K:TMT10,s:Phosphorylated S ECH1 36157.9 1 4 3581.1 47.75 HUMAN 1 13.0318 10.6411 ELLARKDSETGENIR-p P38646;S627-p ELLARKDSETGENIR 0.810035198209422 0.00410473899050179 0.043 0.585666666666667 1.7574980760185 35.1386986115778 0.043 0.585666666666667 0.667191020120227 0.000306288110615078 0.454402383693725 8.14541385724179 P38646 HSPA9 P38646.S627.p_HSPA9 P38646_S627s _1_1_627_627 P38646 P38646 Stress-70 protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5743.5743.3 10.9 6.79 2.097 2 1 1 0 562.9542 1606.8801 S627s TMT10 625 (R) KDsETGENIR (Q) KDS(0.99)ET(0.0)GENIR K:TMT10,s:Phosphorylated S HSPA9 73964.5 2 34 367.2 341.38 HUMAN 1 1.7575 35.1387 ELLELGDSLMRLGAE-p Q9P2G1;S921-p ELLELGDSLMRLGAE 0.625103302677489 0.0766934526272188 0.0956666666666667 0.234 3.78849271106637 14.7990559116869 0.0956666666666667 0.234 0.417975406571429 0.033120311203656 0.876477567566327 2.83902600036984 Q9P2G1 ANKIB1 Q9P2G1.S921.p_ANKIB1 Q9P2G1_S921s _1_1_921_921 Q9P2G1 Q9P2G1 Ankyrin repeat and IBR domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32185.32185.3 19.85 19.85 8.775 4 1 1 0 701.0173 2021.0786 S921s TMT10 908 (R) AALSSSELLELGDsLMR (L) AALS(0.0)S(0.0)S(0.0)ELLELGDS(0.99)LMR s:Phosphorylated S ANKIB1 124110.4 1 12 1291.1 157.55 HUMAN 1 3.7885 14.7991 ELLERAESVERLEEA-p Q15814;S80-p ELLERAESVERLEEA 0.957246455101486 0.0227854822249145 -0.011 0.408666666666667 0.370801036011921 22.4218436443849 -0.011 0.408666666666667 0.918163229918978 0.00572552922194155 -0.107635381152554 4.41428279916381 Q15814 TBCC Q15814.S80.p_TBCC Q15814_S80s _1_1_80_80 Q15814 Q15814 Tubulin-specific chaperone C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32151.32151.4 17.83 17.83 7.066 2 1 1 0 692.3522 2686.4209 S80s TMT10 69 (R) AAVEELLERAEsVERLEEAASR (L) AAVEELLERAES(0.99)VERLEEAAS(0.0)R s:Phosphorylated S TBCC 39760.9 3 1 3008.1 63.4 HUMAN 1 -0.3708 22.4218 ELLGSDDSHDGESES-p P38398;S398-p ELLGSDDSHDGESES 0.422807784151987 0.13591888919933 0.117166666666667 -0.244166666666667 6.88704391857642 11.421160410179 0.117166666666667 -0.244166666666667 0.204783804983832 0.0720914829100447 1.44122600074138 -2.22901503162435 P38398 BRCA1 P38398.S398.p_BRCA1 P38398_S395sS398s_2_2_395_398 P38398 P38398-7|P38398-4|P38398-8|Q5YLB2 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13738.13738.3 13.66 13.66 5.816 5 2 2 0 904.0402 2550.1844 S395s S398s TMT10 389 (R) SDELLGsDDsHDGESESNAK (V) S(0.0)DELLGS(0.99)DDS(0.99)HDGES(0.0)ES(0.0)NAK K:TMT10,s:Phosphorylated S BRCA1 210227.6 4 23 106.1 588.91 HUMAN 2 6.887 -11.4212 ELLMSALSPCLL___-p Q9NVC6;S647-p ELLMSALSPCLL___ 0.6705604621194 0.0366069010283796 -0.0663333333333333 0.392 3.24988367636297 19.3286306808564 -0.0663333333333333 0.392 0.473163932254534 0.0116717756708553 -0.77072516949316 3.73298126962264 Q9NVC6 MED17 Q9NVC6.S647.p_MED17 Q9NVC6_S647s _1_1_647_647 Q9NVC6 A0A1W2PRB8|Q9NVC6|A0A1W2PNW7 Mediator of RNA polymerase II transcription subunit 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37883.37883.2 10.29 10.29 5.45 2 1 1 0 893.9417 1706.9092 S647s TMT10 639 (K) MELLMSALsPCLL (-) MELLMS(0.0)ALS(0.99)PCLL C:Carbamidomethylation,s:Phosphorylated S MED17 73402.3 1 2 4185.1 35.73 HUMAN 1 -3.2499 19.3286 ELLPELGSLPPVNT_-p A2ABF9;S1261-p ELLPELGSLPPVNT_ 0.375099103740569 0.568089684240398 0.131 0.0573333333333333 7.88379986226689 3.30997854002131 0.131 0.0573333333333334 0.162787110252663 0.466661686243909 1.6149963349347 0.782582392929595 A2ABF9 EHMT2 A2ABF9.S1261.p_EHMT2 A2ABF9_S1261s _1_1_1261_1261 A2ABF9 A2ABF9|A0A0G2JK64|A2ABF8|A0A0G2JIR1|Q96KQ7|Q96KQ7-2|A0A0G2JIS2 Histone-lysine N-methyltransferase EHMT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.32799.32799.3 12.82 12.82 2.043 2 1 1 0 783.0774 2267.2485 S1261s TMT10 1249 (R) LDPHPELLPELGsLPPVNT (-) LDPHPELLPELGS(0.99)LPPVNT(0.0) s:Phosphorylated S EHMT2 141220.9 2 13 719.1 237.26 HUMAN 1 7.8838 3.31 ELLPRRNSLILKPKP-p Q9NXD2;S607-p ELLPRRNSLILKPKP 0.661040091247177 0.0279776566989861 0.0826666666666667 0.444 3.36599163408317 21.0492396020654 0.0826666666666667 0.444 0.460681568250987 0.0078537313205811 0.793817586723972 4.10373506723588 Q9NXD2 MTMR10 Q9NXD2.S607.p_MTMR10 Q9NXD2_S607s _1_1_607_607 Q9NXD2 Q9NXD2 Myotubularin-related protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23746.23746.5 19.72 15.29 7.162 7 1 1 0 990.9235 4870.5934 S607s TMT10 605 (R) RNsLILKPKPDPAQQTDSQNSDTEQYFREWFSK (P) RNS(0.99)LILKPKPDPAQQT(0.0)DS(0.0)QNS(0.0)DT(0.0)EQY(0.0)FREWFS(0.0)K K:TMT10,s:Phosphorylated S MTMR10 89241.4 4 3 2754.1 71.76 HUMAN 1 3.366 21.0492 ELLPSAESPVCWLEQ-p O95402;S337-p ELLPSAESPVCWLEQ 0.30573507454244 0.548417940595983 0.174666666666667 0.102 9.64754257107744 3.5087732822006 0.174666666666667 0.102 0.108454042103392 0.445782147227131 1.92053622183269 0.821856849940555 O95402 MED26 O95402.S337.p_MED26 O95402_S337s _1_1_337_337 O95402 O95402|B8ZZF3 Mediator of RNA polymerase II transcription subunit 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26039.26039.4 17.1 17.1 5.058 3 1 1 0 768.3774 2990.5356 S337s TMT10 328 (R) RLELLPSAEsPVCWLEQPESHQR (L) RLELLPS(0.0)AES(0.99)PVCWLEQPES(0.0)HQR C:Carbamidomethylation,s:Phosphorylated S MED26 65901.7 2 4 901.1 203.59 HUMAN 1 9.6475 3.5088 ELLPSGDSPLNQRMT-p Q12980;S476-p ELLPSGDSPLNQRMT 0.303423940401778 0.0686965950087876 0.150333333333333 0.216666666666667 9.70139411480379 15.468512374145 0.150333333333333 0.216666666666667 0.107117539545967 0.0283889129151134 1.92987589558773 2.96478242787066 Q12980 NPRL3 Q12980.S476.p_NPRL3 Q12980_S476s_1_1_476_476 Q12980 Q12980|B7Z6Q0 GATOR complex protein NPRL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31268.31268.4 28.71 28.71 1.136 16 1 1 0 1206.3037 4741.2294 N465n S476s TMT10 438 (R) SLSTPNALSFGSPTSSDDMTLTSPSMDnSSAELLPSGDsPLNQR (M) S(0.0)LS(0.0)T(0.0)PN(0.0)ALS(0.0)FGS(0.0)PT(0.0)S(0.0)S(0.0)DDMT(0.0)LT(0.0)S(0.0)PS(0.0)MDN(0.99)S(0.0)S(0.0)AELLPS(0.0)GDS(0.99)PLN(0.0)QR n:Deamidated,s:Phosphorylated S NPRL3 64174.4 2 4 3067.1 61.64 HUMAN 1 9.7014 15.4685 ELLQRCESLEKKTAT-p Q12933-2;S326-p ELLQRCESLEKKTAT 0.769256878109637 0.170878120852824 0.0513333333333333 -0.309666666666667 2.18187792921649 10.0883943594399 0.0513333333333333 -0.309666666666667 0.605079176385922 0.0979852181953943 0.548713824104687 -1.9962565343346 Q12933 TRAF2 Q12933.2.S326.p_TRAF2 Q12933-2_S326s _1_1_326_326 Q12933-2 Q12933-2|Q12933-3 Isoform 2 of TNF receptor-associated factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6354.6354.3 7.76 7.76 99 1 1 1 0 477.9159 1351.7656 S326s Hydrogen 324 (R) CEsLEKK (T) CES(1.0)LEKK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S TRAF2 63265.6 1 3 5094.1 23.03 HUMAN 1 2.1819 -10.0884 ELLRQSLS_______-p P82094-2;S1096-p ELLRQSLS_______ 0.182722695333724 0.112517556800134 0.255 0.167666666666667 14.5161322598415 12.5155887788878 0.255 0.16775812096207 0.0353497847790893 0.0560326448002221 2.78818435752701 2.42286337983082 P82094 TMF1 P82094.2.S1096.p_TMF1 P82094-2_S1096s _1_1_1096_1096 P82094-2 P82094-2 Isoform 2 of TATA element modulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23721.23721.2 11.13 11.13 1.251 3 1 1 0 856.4433 1631.9166 S1096s TMT10 1085 (K) TQIDELLRQSLs (-) T(0.0)QIDELLRQS(0.0)LS(0.99) s:Phosphorylated S TMF1 123666.4 1 20 393.1 331.84 HUMAN 1 14.5161 12.5156 ELLRYSESLLGVPIA-p Q3B726;S85-p ELLRYSESLLGVPIA 0.470707497424437 0.150755419574966 -0.192 0.154666666666667 6.04064130137716 10.8080445117545 -0.192 0.154666666666667 0.248848982805321 0.0830224506735831 -1.29180027784193 2.12157597444779 Q3B726 TWISTNB Q3B726.S85.p_TWISTNB Q3B726_S85s _1_1_85_85 Q3B726 Q3B726 DNA-directed RNA polymerase I subunit RPA43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31074.31074.3 17.79 17.79 1.131 4 1 1 0 774.0813 2240.2579 S85s TMT10 82 (R) YSEsLLGVPIAYDNIK (V) Y(0.0)S(0.0)ES(0.99)LLGVPIAY(0.0)DNIK K:TMT10,s:Phosphorylated S TWISTNB 37945.1 1 3 540.1 277.01 HUMAN 1 -6.0406 10.808 ELMGGAQTPTKQPEE-p Q0VD83-4;T572-p ELMGGAQTPTKQPEE 0.134264480831341 0.0414125545583183 0.357 0.314333333333333 17.9111629153119 18.5388722313652 0.357 0.314333333333333 0.0161764682050092 0.0139995081225694 3.44430867134596 3.56912272819282 Q0VD83 APOBR Q0VD83.4.T572.p_APOBR Q0VD83-4_T572t _1_1_572_572 Q0VD83-4 Q0VD83-4|Q0VD83-3|Q0VD83-2 Isoform 4 of Apolipoprotein B receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11511.11511.3 14.91 11.25 3.083 2 1 1 0 883.7735 2569.3445 T572t TMT10 561 (K) GQGPELMGGAQtPTKQPEER (E) GQGPELMGGAQT(0.99)PT(0.0)KQPEER K:TMT10,t:Phosphorylated T APOBR 116088.3 1 1 5975.1 14.91 HUMAN 1 17.9112 18.5389 ELMKAFETPEEKRAR-p Q8WUQ7-2;T162-p ELMKAFETPEEKRAR 0.810035198209422 0.00815813217337322 -0.038 -0.507666666666667 1.75660529504318 29.7453118069074 -0.038 -0.507666666666667 0.667328188954567 0.00106039780311319 -0.454199437215148 -6.3450617566913 Q8WUQ7 CACTIN Q8WUQ7.2.T162.p_CACTIN Q8WUQ7-2_T162t _1_1_162_162 Q8WUQ7-2 Q8WUQ7-2 Isoform 2 of Cactin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12309.12309.3 8.02 8.02 99 1 1 1 0 496.9179 1408.7724 T162t TMT10 159 (K) AFEtPEEK (R) AFET(1.0)PEEK K:TMT10,t:Phosphorylated T CACTIN 108392.3 1 1 2920.1 65.94 HUMAN 1 -1.7566 -29.7453 ELMNKLLSPVVPQIS-p H3BVG0;S647-p ELMNKLLSPVVPQIS 0.647342264442296 0.102393837912157 -0.098 0.258 3.53837261868756 13.0709098235884 -0.0980000000000001 0.258 0.442754249443848 0.0493070497516157 -0.827792278103542 2.52245936733933 H3BVG0 NotFound H3BVG0.S647.p_NotFound H3BVG0_S647s _1_1_647_647 H3BVG0 H3BVG0|Q8N1F7|Q8N1F7-2 Nuclear pore complex protein Nup93 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27034.27034.3 16.21 14.94 6.378 3 1 1 0 739.4199 2136.2793 S647s TMT10 645 (K) LLsPVVPQISAPQSNK (E) LLS(0.99)PVVPQIS(0.0)APQS(0.0)NK K:TMT10,s:Phosphorylated S NUP93 100351.7 2 11 862.1 210.52 HUMAN 1 -3.5384 13.0709 ELNARRRSFTAADSK-p Q8N2U9;S110-p ELNARRRSFTAADSK 0.147678627020547 0.009762507859294 -0.335666666666667 0.521666666666667 16.8577974478736 28.3031160617453 -0.335666666666667 0.521666666666667 0.0206167523990486 0.00147804750893136 -3.23467900347573 5.92330548210155 Q8N2U9 PQLC1 Q8N2U9.S110.p_PQLC1 Q8N2U9_S110s _1_1_110_110 Q8N2U9 Q8N2U9|K7ERV4 PQ-loop repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10722.10722.3 14.85 14.85 1.854 3 1 1 0 655.6595 1884.9955 S110s Hydrogen 110 (R) sFTAADSKDEEVK (V) S(0.99)FT(0.0)AADS(0.0)KDEEVK K:TMT10-Lys-Only,s:Phosphorylated S PQLC1 30705.3 1 1 5987.1 14.85 HUMAN 1 -16.8578 28.3031 ELNERWRSLQQLAEE-p A0A0D9SGF6;S1217-p ELNERWRSLQQLAEE 0.917779579109931 0.892301713752749 0.016 0.021 0.728029920921262 0.695169810751104 0.016 0.021 0.845662373848845 0.852085193881167 0.2041936281343 0.19554562526277 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.S1217.p_SPTAN1 A0A0D9SGF6_S1217s _1_1_1217_1217 A0A0D9SGF6 A0A0D9SGF6|Q13813-2|A0A0D9SF54|Q13813-3 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14612.14612.2 13.93 5.27 99 1 1 1 0 691.8475 1302.7215 S1217s TMT10 1217 (R) sLQQLAEER (S) S(1.0)LQQLAEER s:Phosphorylated S SPTAN1 288398.5 10 12 263.1 396.39 HUMAN 1 0.728 0.6952 ELNETFLSDSEKEKL-p Q8IWJ2;S446-p ELNETFLSDSEKEKL 0.108274227113564 0.0523769786886803 -0.442333333333333 0.226666666666667 20.2775469994232 17.0899998705642 -0.449022561797082 0.226666666666667 0.00938091714270702 0.0195433951402191 -3.93876974260334 3.27786786546557 Q8IWJ2 GCC2 Q8IWJ2.S446.p_GCC2 Q8IWJ2_S446s _1_1_446_446 Q8IWJ2 Q8IWJ2 GRIP and coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24671.24671.3 18.2 18.2 1.437 4 1 1 0 760.3752 2199.1433 S446s TMT10 436 (K) EISELNETFLsDSEK (E) EIS(0.0)ELNET(0.0)FLS(0.99)DS(0.0)EK K:TMT10,s:Phosphorylated S GCC2 196990.2 1 90 9.3 1298.62 HUMAN 1 -20.2775 17.09 ELNGSILSGGYPGSA-p O43663;S557-p ELNGSILSGGYPGSA 0.890950329727649 0.06144410136737 0.0286666666666667 -0.389 0.981345192500575 16.1302590743244 0.0286666666666667 -0.389 0.797747553057571 0.0243766539737458 0.269192497199943 -3.09103530976061 O43663 PRC1 O43663.S557.p_PRC1 O43663_S557s _1_1_557_557 O43663 O43663|O43663-4|O43663-2 Protein regulator of cytokinesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25218.25218.3 24.33 19.5 2.591 4 1 1 0 861.1017 2501.3197 S557s TMT10 547 (K) ENLELNGSILsGGYPGSAPLQR (N) ENLELNGS(0.0)ILS(0.99)GGY(0.0)PGS(0.0)APLQR s:Phosphorylated S PRC1 72290 1 8 715.1 238.03 HUMAN 1 0.9813 -16.1303 ELNNKCLTPQRERSG-p Q9UQ35;T1511-p ELNNKCLTPQRERSG 0.535980313174196 0.0408732616119855 0.0926666666666667 0.379666666666667 5.01345264367019 18.6116788699517 0.0926666666666667 0.379666666666667 0.315249738961271 0.0137667717828498 1.10652281017635 3.5840719442049 Q9UQ35 SRRM2 Q9UQ35.T1511.p_SRRM2 Q9UQ35_T1511t _1_1_1511_1511 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.4323.4323.3 8.74 5.15 99 1 1 1 0 456.8933 1288.6993 T1511t TMT10 1509 (K) CLtPQRER (S) CLT(1.0)PQRER C:Carbamidomethylation,t:Phosphorylated T SRRM2 300351.7 4 96 2.1 3310.34 HUMAN 1 5.0135 18.6117 ELNSEVGSETESNVD-p Q9Y4J8-15;S581-p ELNSEVGSETESNVD 0.25815125980246 0.17639621549776 -0.165666666666667 0.155 11.1781185127651 9.90950526990551 -0.165666666666667 0.155 0.0762409235857076 0.10210557914846 -2.18734400645489 1.96520601229849 Q9Y4J8 DTNA Q9Y4J8.15.S581.p_DTNA Q9Y4J8-15_S581s _1_1_581_581 Q9Y4J8-15 Q9Y4J8|Q9Y4J8-15|Q9Y4J8-14|Q9Y4J8-2|Q9Y4J8-13|Q9Y4J8-11 Isoform 15 of Dystrobrevin alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17915.17915.3 21.7 21.7 1.728 5 1 1 0 836.7049 2428.1313 S581s TMT10 574 (K) ELNSEVGsETESNVDSEFAR (T) ELNS(0.0)EVGS(0.99)ET(0.0)ES(0.0)NVDS(0.0)EFAR s:Phosphorylated S DTNA 83008.6 2 21 792.1 224.62 HUMAN 1 -11.1781 9.9095 ELPCPPPSPRLNASL-p Q8TBB5;S62-p ELPCPPPSPRLNASL 0.918430174900821 0.0550150609783032 0.0273333333333333 -0.232 0.721418534334984 16.7807424584239 0.0273333333333333 -0.232 0.846950729777163 0.0209858108505192 0.20246123523271 -3.21716198023573 Q8TBB5 KLHDC4 Q8TBB5.S62.p_KLHDC4 Q8TBB5_S62s _1_1_62_62 Q8TBB5 Q8TBB5|Q8TBB5-3|H3BQ90|H3BQL0|H3BP99 Kelch domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11922.11922.3 13.04 7.05 13.037 3 1 1 0 682.0142 1964.0585 S62s TMT10 50 (K) RTQTVELPCPPPsPR (L) RT(0.0)QT(0.0)VELPCPPPS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S KLHDC4 58289.9 1 1 3120.1 60.27 HUMAN 1 0.7214 -16.7807 ELPGGDLSPPDSPEP-p Q9NYV4-2;S681-p ELPGGDLSPPDSPEP 0.745259665546982 0.414531335045367 0.0443333333333333 0.0826666666666667 2.42345894699728 5.08702764513389 0.0443333333333333 0.0826666666666667 0.572340008077472 0.309953992956849 0.600664146463162 1.11975305051214 Q9NYV4 CDK12 Q9NYV4.2.S681.p_CDK12 Q9NYV4-2_S681s _1_1_681_681 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.31560.31759.5 23.36 23.36 4.385 3 1 1 0 654.748 3189.7448 S681s TMT10 664 (R) HLLTDLPLPPELPGGDLsPPDSPEPK (A) HLLT(0.0)DLPLPPELPGGDLS(0.99)PPDS(0.0)PEPK K:TMT10,s:Phosphorylated S CDK12 163853.1 21 24 59.1 708.76 HUMAN 1 2.4235 5.087 ELPKAGGSPAPGPET-p P33316;S88-p ELPKAGGSPAPGPET 0.314903263880415 0.013613029191102 0.142 0.508 9.38969870576532 25.9318253977398 0.142 0.508 0.115088022913685 0.00255162859364616 1.87584556763631 5.27680895154182 P33316 DUT P33316.S88.p_DUT P33316_S88s _1_1_88_88 P33316 P33316|H0YKI0 Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14282.14282.3 17.62 13.86 1.232 4 1 1 0 720.3774 2079.1486 S88s TMT10 85 (K) AGGsPAPGPETPAISPSK (R) AGGS(0.99)PAPGPET(0.0)PAIS(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S DUT 26848 3 2 2301.1 89.12 HUMAN 1 9.3897 25.9318 ELPPSPASPPEQPPA-p Q96N64;S119-p ELPPSPASPPEQPPA 0.173693396415861 0.6684220242286 0.287333333333333 0.0893333333333333 15.1435833936824 2.39379892089331 0.287333333333333 0.0893333333333333 0.0305943802857997 0.576262166831143 2.90542399168074 0.594273198690351 Q96N64 PWWP2A Q96N64.S119.p_PWWP2A Q96N64_S116sS119s_2_2_116_119 Q96N64 Q96N64 PWWP domain-containing protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18946.18946.4 19.71 19.71 9.221 3 2 2 0 880.9166 3360.6909 S116s S119s TMT10 99 (R) VAESAAAAPQGGPELPPsPAsPPEQPPAPEER (E) VAES(0.0)AAAAPQGGPELPPS(0.99)PAS(0.99)PPEQPPAPEER s:Phosphorylated S PWWP2A 82415.3 1 6 1984.1 104.07 HUMAN 1 15.1436 2.3938 ELPQAKGSDDELFLG-p Q96JB3;S197-p ELPQAKGSDDELFLG 0.400835050148076 0.0676290831733223 0.232333333333333 -0.398666666666667 7.3281436396338 15.5650078071771 0.232333333333333 -0.398666666666667 0.185005924444177 0.0277650985485542 1.51833953870568 -2.98306866273282 Q96JB3 HIC2 Q96JB3.S197.p_HIC2 Q96JB3_S197s _1_1_197_197 Q96JB3 Q96JB3|Q96JB3-2 Hypermethylated in cancer 2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18140.18140.5 24.95 24.95 7.417 3 1 1 0 855.6438 4194.2147 S197s TMT10 183 (R) KGAHAPQELPQAKGsDDELFLGGSNQDSVQGLGR (A) KGAHAPQELPQAKGS(0.99)DDELFLGGS(0.0)NQDS(0.0)VQGLGR K:TMT10,s:Phosphorylated S HIC2 67181.8 1 1 4930.1 24.95 HUMAN 1 7.3281 -15.565 ELPQRHNSLHRKTPG-p Q8TF74;S282-p ELPQRHNSLHRKTPG 0.564811040623116 0.445721775296053 0.099 0.115333333333333 4.57011813012873 4.6744449802805 0.099 0.115333333333333 0.349130818827993 0.340843881187938 1.02465582125043 1.04384632308025 Q8TF74 WIPF2 Q8TF74.S282.p_WIPF2 Q8TF74_S282s _1_1_282_282 Q8TF74 Q8TF74|Q8TF74-2 WAS/WASL-interacting protein family member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8913.8913.5 17.17 17.17 1.365 5 1 1 0 754.1888 3686.9516 S282s TMT10 257 (R) QPPGVPNGPSSPTNESAPELPQRHNsLHRK (T) QPPGVPNGPS(0.0)S(0.0)PT(0.0)NES(0.0)APELPQRHNS(0.99)LHRK K:TMT10,s:Phosphorylated S WIPF2 46344.7 5 7 952.1 196.18 HUMAN 1 4.5701 4.6744 ELPTRVSSPVFGATS-p I6L8A6;S327-p ELPTRVSSPVFGATS 0.5483118247722 0.0128825229095723 -0.0993333333333333 0.482 4.81634240338187 26.3193341672954 -0.0993333333333333 0.482 0.329887424012737 0.00233381584066979 -1.07029187865683 5.37869363341672 I6L8A6 NotFound I6L8A6.S327.p_NotFound I6L8A6_S327s _1_1_327_327 I6L8A6 I6L8A6|Q99708|Q99708-3|Q99708-2 DNA endonuclease RBBP8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21110.21110.2 12.66 12.66 1.147 5 1 1 0 909.4953 1738.0151 S327s TMT10 325 (R) VSsPVFGATSSIK (S) VS(0.0)S(0.99)PVFGAT(0.0)S(0.0)S(0.0)IK K:TMT10,s:Phosphorylated S RBBP8 103921.2 11 6 258.1 398.22 HUMAN 1 -4.8163 26.3193 ELQAPVRSPITRSFA-p Q13480-2;S581-p ELQAPVRSPITRSFA 0.0114491309368266 0.000952253650599092 -1.113 -1.44866666666667 46.6548469640559 56.2131979815066 -1.113 -1.44866666666667 2.16030615793112e-05 2.39155405724483e-06 -13.6100086178408 -20.5097953076466 Q13480 GAB1 Q13480.2.S581.p_GAB1 Q13480-2_S581s _1_1_581_581 Q13480-2 Q13480-2|B7Z3B9 Isoform 2 of GRB2-associated-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26664.26664.5 21.73 21.73 2.434 2 1 1 0 773.0484 3781.2347 S581s TMT10 559 (K) VKPAPLEIKPLPEWEELQAPVRsPITR (S) VKPAPLEIKPLPEWEELQAPVRS(0.99)PIT(0.0)R K:TMT10,s:Phosphorylated S GAB1 80631.3 4 17 368.1 340.82 HUMAN 1 -46.6548 -56.2132 ELQEPCDSPKVKEER-p O94913;S1520-p ELQEPCDSPKVKEER 0.22320926423064 0.0829027332218913 0.240666666666667 0.524 12.5205556374102 14.318380698802 0.240666666666667 0.524 0.0559685990553297 0.0369966098841832 2.42502177231276 2.74986814155669 O94913 PCF11 O94913.S1520.p_PCF11 O94913_S1520s _1_1_1520_1520 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9400.9400.4 7.67 7.67 99 1 1 1 0 682.1023 2645.4172 S1520s TMT10 1512 (K) NELQEPCDsPKVKEER (I) NELQEPCDS(1.0)PKVKEER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCF11 173731.7 1 18 508.1 288.88 HUMAN 1 12.5206 14.3184 ELQGAGHSKLQVTMP-p Q09666;S242-p ELQGAGHSKLQVTMP 0.852795436985984 0.0947522360335324 0.0306666666666667 0.225333333333333 1.33974701938306 13.5334128203794 0.0306666666666667 0.225333333333333 0.734556655526376 0.0443260179471862 0.357055610767972 2.60614337671652 Q09666 AHNAK Q09666.S242.p_AHNAK Q09666_S242s _1_1_242_242 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11754.11754.3 20.81 20.81 7.356 3 1 1 0 726.0441 2096.15 S242s TMT10 226 (R) AGAISASGPELQGAGHsK (L) AGAIS(0.0)AS(0.0)GPELQGAGHS(0.99)K K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 11 1.1 4313.36 HUMAN 1 1.3397 13.5334 ELQGNAPSDPDAVSA-p O95163;S867-p ELQGNAPSDPDAVSA 0.851695487788593 0.532938148536246 0.0276666666666667 0.064 1.35021339554591 3.67579963661163 0.0276666666666667 0.064 0.732788525854471 0.428963199918413 0.359556952706568 0.854491579735694 O95163 IKBKAP O95163.S867.p_IKBKAP O95163_S867s _1_1_867_867 O95163 O95163|F5H2T0 Elongator complex protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17317.17317.4 14.59 14.59 2.373 2 1 1 0 704.6044 2735.4252 S867s TMT10 858 (K) VHELQGNAPsDPDAVSAEEALK (Y) VHELQGNAPS(0.99)DPDAVS(0.0)AEEALK K:TMT10,s:Phosphorylated S ELP1 151906.1 1 4 1710.1 120.03 HUMAN 1 1.3502 3.6758 ELQGPRGSPNARSQP-p P19338;S563-p ELQGPRGSPNARSQP 0.390280290576841 0.764650992242412 0.120333333333333 0.03 7.55407277473283 1.60963648607291 0.120333333333333 0.03 0.175627582170998 0.690297580831064 1.5576937701545 0.420460707351897 P19338 NCL P19338.S563.p_NCL P19338_S563s _1_1_563_563 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12680.12680.4 15.03 15.03 99 1 1 1 0 511.7814 1964.1351 S563s TMT10 552 (R) AIRLELQGPRGsPNAR (S) AIRLELQGPRGS(1.0)PNAR s:Phosphorylated S NCL 76670.1 54 19 114.1 570.88 HUMAN 1 7.5541 1.6096 ELQPIVYTPEDCRKA-p Q8NI77;T706-p ELQPIVYTPEDCRKA 0.350493225948053 0.00506426170667932 0.159333333333333 -0.537666666666667 8.45970074568377 33.4499477569887 0.159333333333333 -0.537666666666667 0.14257058296936 0.000451861379962564 1.71482819614167 -7.54064025936147 Q8NI77 KIF18A Q8NI77.T706.p_KIF18A Q8NI77_T706t _1_1_706_706 Q8NI77 Q8NI77 Kinesin-like protein KIF18A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16525.16525.3 16.05 16.05 4.47 2 1 1 0 762.726 2206.1942 T706t TMT10 699 (K) ELQPIVYtPEDCRK (A) ELQPIVY(0.0)T(0.99)PEDCRK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T KIF18A 103477.4 2 4 2753.1 71.77 HUMAN 1 8.4597 -33.4499 ELQQLEGSSDRILEL-p Q92878-2;S476-p ELQQLEGSSDRILEL 0.104209357384164 0.00672913782096805 -0.373333333333333 0.562333333333333 20.7040826321272 31.1884650853165 -0.373333333333333 0.562333333333334 0.00850338292671408 0.000760595044394242 -4.03170998419963 6.79069703972458 Q92878 RAD50 Q92878.2.S476.p_RAD50 Q92878-2_S476s _1_1_476_476 Q92878-2 Q92878-2|Q92878-3|E7ESD9 Isoform 2 of DNA repair protein RAD50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31662.31662.4 17.16 13.25 1.209 3 1 1 0 932.7575 3648.0463 S476s TMT10 465 (K) NVKYELQQLEGsSDRILELDQELIK (A) NVKY(0.0)ELQQLEGS(0.99)S(0.0)DRILELDQELIK K:TMT10,s:Phosphorylated S RAD50 155611.3 5 2 1263.1 160.86 HUMAN 1 -20.7041 31.1885 ELQQLRDSLDENEAT-p Q9BRK4;S346-p ELQQLRDSLDENEAT 0.619252738741762 0.795480096139035 -0.0696666666666667 -0.0303333333333333 3.86760732307558 1.38770794682178 -0.0696666666666667 -0.0303333333333333 0.410430160730642 0.726489271703821 -0.891736531986915 -0.368451283612662 Q9BRK4 LZTS2 Q9BRK4.S346.p_LZTS2 Q9BRK4_S346s _1_1_346_346 Q9BRK4 Q9BRK4 Leucine zipper putative tumor suppressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21009.21009.4 27.82 27.82 10.229 3 1 1 0 835.1199 3257.4888 S346s TMT10 337 (R) EAELQQLRDsLDENEATMCQAYEER (Q) EAELQQLRDS(0.99)LDENEAT(0.0)MCQAY(0.0)EER C:Carbamidomethylation,s:Phosphorylated S LZTS2 73442.7 3 8 710.1 238.65 HUMAN 1 -3.8676 -1.3877 ELQSANASVDDSRLE-p P22314;S820-p ELQSANASVDDSRLE 0.00930600980988524 0.00229787700279713 -1.109 -0.886666666666667 48.8965619199206 40.6837127322626 -1.109 -0.886666666666667 1.28926979461875e-05 8.54336038811682e-05 -15.0049307422702 -10.4432052842371 P22314 UBA1 P22314.S820.p_UBA1 P22314_S816sS820s_2_2_816_820 P22314 P22314|P22314-2|Q5JRR6 Ubiquitin-like modifier-activating enzyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20210.20210.4 16.9 16.9 5.262 4 2 2 0 826.1508 3141.6428 S816s S820s TMT10 807 (K) IHVSDQELQsANAsVDDSRLEELK (A) IHVS(0.0)DQELQS(0.99)ANAS(0.99)VDDS(0.0)RLEELK K:TMT10,s:Phosphorylated S UBA1 118930.9 3 14 289.1 381.86 HUMAN 1 -48.8966 -40.6837 ELQSKRASFAEKTAQ-p Q15149;S1721-p ELQSKRASFAEKTAQ 0.181399305482146 0.0421269025640868 -0.325666666666667 -0.266666666666667 14.6076626483869 18.4310442887866 -0.325666666666667 -0.266666666666667 0.0346125610813866 0.0143514430225817 -2.80518672555185 -3.54703979109619 Q15149 PLEC Q15149.S1721.p_PLEC Q15149_S1721s _1_1_1721_1721 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7551.7551.3 7.76 7.76 99 1 1 1 0 449.5794 1266.757 S1721s TMT10 1719 (K) RAsFAEK (T) RAS(1.0)FAEK K:TMT10,s:Phosphorylated S PLEC 533778 7 15 44.1 794.85 HUMAN 1 -14.6077 -18.431 ELQSLEQSHLKELED-p Q8TDY2;S986-p ELQSLEQSHLKELED 0.102728705875057 0.000952253650599092 0.763333333333333 1.59666666666667 20.8810396420135 58.7418397273855 0.763333333333333 1.59666666666667 0.00816386916023504 1.33602943737087e-06 4.0706343041196 22.8593703976616 Q8TDY2 RB1CC1 Q8TDY2.S986.p_RB1CC1 Q8TDY2_S986s _1_1_986_986 Q8TDY2 Q8TDY2|Q8TDY2-2 RB1-inducible coiled-coil protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15868.15868.3 17.23 17.23 5.517 2 1 1 0 641.0127 1841.0533 S986s TMT10 978 (R) AELQSLEQsHLK (E) AELQS(0.0)LEQS(0.99)HLK K:TMT10,s:Phosphorylated S RB1CC1 185198.6 2 13 707.1 238.96 HUMAN 1 20.881 58.7418 ELQTLCKTPPRSLSA-p O94986;T1241-p ELQTLCKTPPRSLSA 0.46084376761032 0.0350177201412657 0.109333333333333 -0.292666666666667 6.20380309104669 19.5999106282033 0.109333333333333 -0.292666666666667 0.239673319473729 0.0109650076037986 1.32078932116058 -3.79015173225706 O94986 CEP152 O94986.T1241.p_CEP152 O94986_T1241t _1_1_1241_1241 O94986 O94986|O94986-3|O94986-2|O94986-1 Centrosomal protein of 152 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17899.17899.5 14.32 14.32 2.082 2 1 1 0 519.6937 2514.4681 T1241t TMT10 1230 (K) NKLEELQTLCKtPPR (S) NKLEELQT(0.0)LCKT(0.99)PPR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T CEP152 198019.2 3 6 1197.1 167.32 HUMAN 1 6.2038 -19.5999 ELQVPINSPRRNISP-p Q659C4;S900-p ELQVPINSPRRNISP 0.771638354290043 0.648631882286489 0.0516666666666667 -0.0533333333333333 2.15497141785444 2.56466325119913 0.0516666666666667 -0.0533333333333333 0.608839552693138 0.554030501397585 0.542854482814827 -0.630431868719226 Q659C4 LARP1B Q659C4.S900.p_LARP1B Q659C4_S900s _1_1_900_900 Q659C4 Q659C4|Q659C4-2|Q659C4-8 La-related protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15621.15621.5 16.55 11.72 10.729 8 1 1 0 791.2402 3872.1961 S900s TMT10 874 (R) LPPNSSTKPPNAAKPTSTSELQVPINsPRR (N) LPPNS(0.0)S(0.0)T(0.0)KPPNAAKPT(0.0)S(0.0)T(0.0)S(0.0)ELQVPINS(0.99)PRR K:TMT10,s:Phosphorylated S LARP1B 105833.8 2 11 551.1 274.41 HUMAN 1 2.155 -2.5647 ELRDHADSNIVIMLV-p Q15907;S115-p ELRDHADSNIVIMLV 0.730894346996865 0.0171812531051886 -0.0556666666666667 0.375666666666667 2.58417752502389 24.3497129601324 -0.0556666666666667 0.375666666666667 0.551546645422277 0.00367306576226035 -0.634610197277146 4.87506274191515 Q15907 RAB11B Q15907.S115.p_RAB11B Q15907_S115s _1_1_115_115 Q15907 Q15907|P62491|H3BSC1|Q15907-2|P62491-2|B4DQU5 Ras-related protein Rab-11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26203.26203.4 16.38 13.63 99 1 1 1 0 641.3439 2482.3852 S115s TMT10 108 (K) ELRDHADsNIVIMLVGNK (S) ELRDHADS(1.0)NIVIMLVGNK K:TMT10,s:Phosphorylated S RAB11B 24602.2 3 6 2989.1 63.94 HUMAN 1 -2.5842 24.3497 ELREFCNSPDCSAWK-p O14524;S368-p ELREFCNSPDCSAWK 0.230960841866505 0.00393416365141874 -0.268333333333333 -0.623 12.2332155464568 35.4758620801141 -0.268333333333333 -0.623 0.0597968690950981 0.000283409100695236 -2.37377011145986 -8.27105499032014 O14524 NEMP1 O14524.S368.p_NEMP1 O14524_S368s _1_1_368_368 O14524 O14524 Nuclear envelope integral membrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23925.23925.4 18.71 18.71 2.333 2 1 1 0 688.3228 2670.3056 S368s TMT10 358 (K) ALEELREFCNsPDCSAWK (T) ALEELREFCNS(0.99)PDCS(0.0)AWK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NEMP1 51437.8 1 1 5507.1 18.71 HUMAN 1 -12.2332 -35.4759 ELRGRAASLEQEVVA-p Q8TF21-2;S1025-p ELRGRAASLEQEVVA 0.0467983898119534 0.426171323375941 -0.538666666666667 -0.0906666666666666 29.5544673832953 4.93017249284509 -0.538666666666667 -0.0906666666666666 0.00110803444586391 0.321353290118135 -6.29770629097416 -1.09102826685298 Q8TF21 ANKRD24 Q8TF21.2.S1025.p_ANKRD24 Q8TF21-2_S1025s _1_1_1025_1025 Q8TF21-2 Q8TF21-2 Isoform 2 of Ankyrin repeat domain-containing protein 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20086.20086.3 11.83 11.83 10.972 2 1 1 0 614.3322 1761.0158 S1025s TMT10 1023 (R) AAsLEQEVVATGK (E) AAS(0.99)LEQEVVAT(0.0)GK K:TMT10,s:Phosphorylated S ANKRD24 133347.1 1 1 6414.1 11.83 HUMAN 1 -29.5545 -4.9302 ELRKPSGSPDLWKLS-p Q96JM3;S445-p ELRKPSGSPDLWKLS 0.256626955344017 0.00203605351766751 0.162666666666667 0.775333333333333 11.2197345150173 41.9750332009681 0.162666666666667 0.775333333333333 0.0755138387997363 6.34595049607069e-05 2.19465056040403 11.0563848096029 Q96JM3 CHAMP1 Q96JM3.S445.p_CHAMP1 Q96JM3_S445s _1_1_445_445 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16148.16148.3 11.43 11.43 2.5 2 1 1 0 628.0193 1802.0779 S445s TMT10 441 (R) KPSGsPDLWK (L) KPS(0.0)GS(0.99)PDLWK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 14 24 25.1 950.05 HUMAN 1 11.2197 41.975 ELRKRRVSQDLEVEK-p O94885;S90-p ELRKRRVSQDLEVEK 0.865557686443598 0.0297441008971245 0.0263333333333333 0.288666666666667 1.21833341065526 20.6578768652697 0.0263333333333333 0.288666666666667 0.755382047177995 0.00859433569972679 0.32778267855719 4.01766363848113 O94885 SASH1 O94885.S90.p_SASH1 O94885_S90s _1_1_90_90 O94885 O94885 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16140.16140.4 20.87 20.87 11.088 4 1 1 0 670.1 2597.4096 S90s Hydrogen 88 (R) RVsQDLEVEKPDASPTSLQLR (S) RVS(0.99)QDLEVEKPDAS(0.0)PT(0.0)S(0.0)LQLR K:TMT10-Lys-Only,s:Phosphorylated S SASH1 137734.8 6 1 295.1 379.69 HUMAN 1 1.2183 20.6579 ELRNLSLSGHVGFDS-p D6RER5;S19-p ELRNLSLSGHVGFDS 0.411365364981325 0.671254299123266 0.122333333333333 0.0426666666666667 7.12025739313086 2.36684031888413 0.122333333333333 0.0426666666666667 0.194077085059848 0.579850409376238 1.48204765238708 0.588518416519793 D6RER5 NotFound D6RER5.S19.p_NotFound D6RER5_S19s _1_1_19_19 D6RER5 Q9NVA2-2|D6RER5|D6RGI3 Septin-11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27741.27741.3 14.41 8.06 1.108 3 1 1 0 893.4694 2598.4292 S19s TMT10 15 (R) NLSLsGHVGFDSLPDQLVNK (S) NLS(0.0)LS(0.99)GHVGFDS(0.0)LPDQLVNK K:TMT10,s:Phosphorylated S SEPT11 50150.2 3 2 2582.2 77.62 HUMAN 1 7.1203 2.3668 ELRQGDDSSDEEDKE-p Q12846;S14-p ELRQGDDSSDEEDKE 0.11084243642501 0.0218578827823035 0.317333333333333 0.393333333333333 19.9902412557156 22.6924628459332 0.317333333333333 0.393333333333333 0.0100224956038426 0.00537964620976914 3.87685634913281 4.47717207987723 Q12846 STX4 Q12846.S14.p_STX4 Q12846_S14sS15s_2_2_14_15 Q12846 Q12846|H3BMK2 Syntaxin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11956.11956.5 12.18 12.18 4.119 4 2 2 0 773.7728 3704.8993 S14s S15s TMT10 5 (R) THELRQGDDssDEEDKERVALVVHPGTAR (L) T(0.0)HELRQGDDS(0.99)S(0.99)DEEDKERVALVVHPGT(0.0)AR K:TMT10,s:Phosphorylated S STX4 34293.4 16 5 1970.1 104.86 HUMAN 1 19.9902 22.6925 ELRRTVQSLEIDLDS-p P05783;S305-p ELRRTVQSLEIDLDS 0.473883553504948 0.411944189200086 -0.0956666666666667 0.0856666666666667 5.97365780148683 5.12317026685133 -0.0956666666666667 0.0856666666666667 0.252716861755968 0.307385214214388 -1.27986950085845 1.12635009172703 P05783 KRT18 P05783.S305.p_KRT18 P05783_S305s _1_1_305_305 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28619.28619.2 16.96 16.96 4.727 3 1 1 0 908.4413 1735.9098 S305s TMT10 302 (R) TVQsLEIDLDSMR (N) T(0.0)VQS(0.99)LEIDLDS(0.0)MR s:Phosphorylated S KRT18 48057 13 21 89.1 623.62 HUMAN 1 -5.9737 5.1232 ELRSLLASGRARLFD-p Q8NFU3;S18-p ELRSLLASGRARLFD 0.278876413635185 0.18981086903438 0.155333333333333 0.207333333333333 10.4843642458788 9.49148684772772 0.155333333333333 0.207333333333333 0.0894465461176766 0.112422002084868 2.06600129601941 1.89276088692198 Q8NFU3 TSTD1 Q8NFU3.S18.p_TSTD1 Q8NFU3_S18s _1_1_18_18 Q8NFU3 Q8NFU3-4|Q8NFU3-3 Thiosulfate:glutathione sulfurtransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11197.11197.2 7.99 3.09 6.722 2 1 1 0 506.7737 932.5726 S18s TMT10 14 (R) SLLAsGR (A) S(0.0)LLAS(0.99)GR s:Phosphorylated S TSTD1 12587.1 1 2 3768.1 43.57 HUMAN 1 10.4844 9.4915 ELRSNVVSPTKNEDN-p Q71RC2-4;S653-p ELRSNVVSPTKNEDN 0.298374898617246 0.00204409866863737 -0.185666666666667 -0.772666666666667 9.87371125532715 41.8968986634274 -0.185666666666667 -0.772666666666667 0.102950598203415 6.46115461283822e-05 -1.95977791496441 -11.0183576907393 Q71RC2 LARP4 Q71RC2.4.S653.p_LARP4 Q71RC2-4_S653s _1_1_653_653 Q71RC2-4 Q71RC2-4|Q71RC2-3|Q71RC2-5|Q71RC2-6|Q71RC2-2 Isoform 4 of La-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8686.8686.5 22.97 17.41 1.654 4 1 1 0 832.0366 4076.1819 S653s TMT10 649 (R) SNVVsPTKNEDNGAPENSVEKPHEKPEAR (A) S(0.0)NVVS(0.99)PT(0.0)KNEDNGAPENS(0.0)VEKPHEKPEAR K:TMT10,s:Phosphorylated S LARP4 81926.9 8 7 841.1 214.37 HUMAN 1 -9.8737 -41.8969 ELRTFSFSDDENKPP-p Q9UHJ3;S767-p ELRTFSFSDDENKPP 0.134032828773212 0.243007598977205 0.331333333333333 -0.138 17.9751650736343 8.09335702300687 0.331333333333333 -0.138 0.0159398229291711 0.155118750467255 3.45724093254901 -1.65082208667077 Q9UHJ3 SFMBT1 Q9UHJ3.S767.p_SFMBT1 Q9UHJ3_S767s _1_1_767_767 Q9UHJ3 Q9UHJ3|Q9UHJ3-2 Scm-like with four MBT domains protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17626.17626.3 16.65 13.79 1.126 4 1 1 0 821.7525 2383.2749 S767s TMT10 763 (R) TFSFsDDENKPPSPK (E) T(0.0)FS(0.0)FS(0.99)DDENKPPS(0.0)PK K:TMT10,s:Phosphorylated S SFMBT1 99737.2 2 3 3632.1 46.53 HUMAN 1 17.9752 -8.0934 ELSARRGSDELLSSG-p O95758-4;S23-p ELSARRGSDELLSSG 0.769256878109637 0.117968492298336 0.0413333333333333 0.173333333333333 2.18197950991282 12.2400193464272 0.0413333333333333 0.173333333333333 0.605065023858589 0.059703262698892 0.548735916141137 2.37376868996328 O95758 PTBP3 O95758.4.S23.p_PTBP3 O95758-4_S23s_1_1_23_23 O95758-4 O95758-4 Isoform 4 of Polypyrimidine tract-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23980.23980.4 24.21 21.45 2.661 10 1 1 0 1038.5233 4070.1067 S23s N47n TMT10 21 (R) RGsDELLSSGIINGPFTMNSSTPSTAnGNDSKK (F) RGS(0.99)DELLS(0.0)S(0.0)GIIN(0.0)GPFT(0.0)MN(0.0)S(0.0)S(0.0)T(0.0)PS(0.0)T(0.0)AN(0.99)GN(0.0)DS(0.0)KK K:TMT10,s:Phosphorylated S,n:Deamidated PTBP3 60701.5 3 1 2265.1 90.69 HUMAN 1 2.182 12.24 ELSDKIGSTIDDTIS-p Q14677-3;S210-p ELSDKIGSTIDDTIS 0.539914690322165 0.14380420887998 -0.1 0.219333333333333 4.94192995154683 11.0938838339579 -0.1 0.219333333333333 0.320484481418346 0.0777341075010224 -1.09340563040275 2.17157651299336 Q14677 CLINT1 Q14677.3.S210.p_CLINT1 Q14677-3_S210s _1_1_210_210 Q14677-3 Q14677-3|Q14677-2 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24803.24803.3 9.43 9.43 1.115 5 1 1 0 887.1531 2579.4747 S210s TMT10 201 (K) LGELSDKIGsTIDDTISK (F) LGELS(0.0)DKIGS(0.99)T(0.0)IDDT(0.0)IS(0.0)K K:TMT10,s:Phosphorylated S CLINT1 70350.7 2 14 632.1 256.73 HUMAN 1 -4.9419 11.0939 ELSDNIISGGLEVLA-p Q9BTT0;S77-p ELSDNIISGGLEVLA 0.341176163615261 0.705506250193855 0.298333333333333 0.041 8.68262859191245 2.08075890148823 0.298333333333333 0.041 0.135436942447137 0.619332841216412 1.75342522560406 0.526551264936556 Q9BTT0 ANP32E Q9BTT0.S77.p_ANP32E Q9BTT0_S77s _1_1_77_77 Q9BTT0 Q9BTT0|Q9BTT0-3|E9PLC4|Q5TB19 Acidic leucine-rich nuclear phosphoprotein 32 family member E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36787.36787.3 8.94 8.94 6.941 2 1 1 0 813.4446 2358.3532 S77s TMT10 69 (K) LELSDNIIsGGLEVLAEK (C) LELS(0.0)DNIIS(0.99)GGLEVLAEK K:TMT10,s:Phosphorylated S ANP32E 30920.2 1 1 5403.1 19.63 HUMAN 1 8.6826 2.0808 ELSDNRVSGGLEVLA-p H0YN26;S77-p ELSDNRVSGGLEVLA 0.548510054717454 0.0274509959109792 0.0843333333333333 0.314 4.8131690917306 21.1792155468672 0.0843333333333333 0.314 0.330128554903182 0.00762216674510188 1.06970646867664 4.13255668933799 H0YN26 NotFound H0YN26.S77.p_NotFound H0YN26_S77s _1_1_77_77 H0YN26 P39687|H0YN26 Acidic leucine-rich nuclear phosphoprotein 32 family member A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23198.23198.4 16.65 14.33 1.287 2 1 1 0 706.9022 2744.6125 S77s TMT10 68 (K) KLELSDNRVsGGLEVLAEK (C) KLELS(0.0)DNRVS(0.99)GGLEVLAEK K:TMT10,s:Phosphorylated S ANP32A 20111 1 2 3539.1 48.78 HUMAN 1 4.8132 21.1792 ELSKEDLSPAFDHSP-p P17706;S298-p ELSKEDLSPAFDHSP 0.176433174076321 0.722805075151847 -0.309666666666667 -0.0403333333333333 14.957971560262 1.94089964945022 -0.309666666666667 -0.0403333333333333 0.0319302886052909 0.63960232689474 -2.87057241364723 -0.495616774424005 P17706 PTPN2 P17706.S298.p_PTPN2 P17706_S298s _1_1_298_298 P17706 P17706|P17706-4|P17706-2|K7EQG9|P17706-3 Tyrosine-protein phosphatase non-receptor type 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16511.16842.3 18.05 16.21 1.363 3 1 1 0 894.4649 2601.4127 S298s TMT10 291 (K) ELSKEDLsPAFDHSPNK (I) ELS(0.0)KEDLS(0.99)PAFDHS(0.0)PNK K:TMT10,s:Phosphorylated S PTPN2 48871.8 5 2 3103.1 60.55 HUMAN 1 -14.958 -1.9409 ELSLVAASPTLSPRQ-p Q16513;S302-p ELSLVAASPTLSPRQ 0.235385561325769 0.158003983449351 0.332666666666667 -0.303 12.0398525142195 10.5412101844614 0.332666666666667 -0.303 0.0625193923910778 0.0882833859832278 2.33940529070631 -2.07502357334954 Q16513 PKN2 Q16513.S302.p_PKN2 Q16513_S302s _1_1_302_302 Q16513 Q16513|Q16513-2|Q16513-3|Q16513-4|B1AL79 Serine/threonine-protein kinase N2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36786.36786.3 27.05 27.05 3.302 4 1 1 0 740.0809 2138.2634 S302s TMT10 291 (R) IIIEELSLVAAsPTLSPR (Q) IIIEELS(0.0)LVAAS(0.99)PT(0.0)LS(0.0)PR s:Phosphorylated S PKN2 112888.4 2 4 389.1 332.6 HUMAN 1 12.0399 -10.5412 ELSPAALSPLLEPIR-p A5YM69;S450-p ELSPAALSPLLEPIR 0.0977397848374227 0.0405973069586793 -0.391333333333333 -0.560666666666667 21.3865999232181 18.6536493728826 -0.391333333333333 -0.560666666666667 0.00726674645911772 0.0136343696015873 -4.18305213960326 -3.59270385828061 A5YM69 ARHGEF35 A5YM69.S450.p_ARHGEF35 A5YM69_S450s _1_1_450_450 A5YM69 A5YM69 Rho guanine nucleotide exchange factor 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33263.33263.3 20.29 20.29 6.008 2 1 1 0 705.7145 2035.1637 S450s TMT10 441 (R) AEELSPAALsPLLEPIR (C) AEELS(0.0)PAALS(0.99)PLLEPIR s:Phosphorylated S ARHGEF35 53685.2 2 4 487.2 295.28 HUMAN 1 -21.3866 -18.6536 ELSPAALSPSLEPIR-p Q12774;S450-p ELSPAALSPSLEPIR 0.846380611827259 0.0136706666678471 -0.059 -0.398 1.4017997588846 25.9009591283457 -0.059 -0.398 0.724135808912295 0.00256982818006015 -0.371835807164997 -5.26875412683034 Q12774 ARHGEF5 Q12774.S450.p_ARHGEF5 Q12774_S445sS450s_2_2_445_450 Q12774 Q12774 Rho guanine nucleotide exchange factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26784.26784.3 14.34 14.34 2.603 3 2 2 0 723.6858 2009.1116 S445s S450s TMT10 441 (R) AEELsPAALsPSLEPIR (C) AEELS(0.99)PAALS(0.99)PS(0.0)LEPIR s:Phosphorylated S ARHGEF5 177994.4 1 21 487.1 295.28 HUMAN 1 -1.4018 -25.901 ELSPIPASPGQAAPL-p Q9H093;S435-p ELSPIPASPGQAAPL 0.159393285726736 0.910187800185154 0.337 0.012 15.9693920336355 0.572225649879446 0.337 0.012 0.0252965209621243 0.876551495446529 3.06231543819483 0.162826733938445 Q9H093 NUAK2 Q9H093.S435.p_NUAK2 Q9H093_S435s _1_1_435_435 Q9H093 Q9H093 NUAK family SNF1-like kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29556.29556.4 10.03 10.03 1.322 4 1 1 0 898.4754 3510.9096 S435s TMT10 415 (K) VSASAEGVQEDPPELSPIPAsPGQAAPLLPK (K) VS(0.0)AS(0.0)AEGVQEDPPELS(0.0)PIPAS(0.99)PGQAAPLLPK K:TMT10,s:Phosphorylated S NUAK2 70124.4 1 10 2021.2 102.05 HUMAN 1 15.9694 0.5722 ELSPRERSPALKSPL-p Q9Y2W1;S248-p ELSPRERSPALKSPL 0.249209007658047 0.0344367244725027 0.197666666666667 0.284333333333333 11.5127059148195 19.7114971848795 0.197666666666667 0.284333333333333 0.0705877613178378 0.0106868639723439 2.24618817323263 3.81380309966303 Q9Y2W1 THRAP3 Q9Y2W1.S248.p_THRAP3 Q9Y2W1_S248s _1_1_248_248 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16318.16318.4 16.78 16.78 13.639 3 1 1 0 576.8369 2224.3542 S248s TMT10 246 (R) ERsPALKSPLQSVVVR (R) ERS(0.99)PALKS(0.0)PLQS(0.0)VVVR K:TMT10,s:Phosphorylated S THRAP3 108720.9 25 60 10.2 1293.04 HUMAN 1 11.5127 19.7115 ELSQAINSGTLLSKP-p Q8IZ21;S283-p ELSQAINSGTLLSKP 0.464943727936046 0.0697146669156021 0.101333333333333 0.209666666666667 6.13783952856169 15.3811600592303 0.101333333333333 0.209666666666667 0.243341425114482 0.0289656977144164 1.30908158550955 2.94826432905427 Q8IZ21 PHACTR4 Q8IZ21.S283.p_PHACTR4 Q8IZ21_S283s _1_1_283_283 Q8IZ21 Q8IZ21-2|Q8IZ21-3 Phosphatase and actin regulator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33414.33414.4 13.57 13.57 1.335 6 1 1 0 974.049 3813.2205 S283s TMT10 269 (R) NSNPVIAELSQAINsGTLLSKPSPPLPPKR (G) NS(0.0)NPVIAELS(0.0)QAINS(0.99)GT(0.0)LLS(0.0)KPS(0.0)PPLPPKR K:TMT10,s:Phosphorylated S PHACTR4 78438 17 6 350.1 351.04 HUMAN 1 6.1378 15.3812 ELSRTGRSREVLELG-p Q8N129;S58-p ELSRTGRSREVLELG 0.286385530635832 0.447511323723131 0.156 0.112666666666667 10.2475261895472 4.65397173259231 0.156 0.112666666666667 0.0944598781563524 0.342454460053308 2.02474893204408 1.04004900919027 Q8N129 CNPY4 Q8N129.S58.p_CNPY4 Q8N129_S58s _1_1_58_58 Q8N129 Q8N129 Protein canopy homolog 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22128.22128.3 8.78 8.78 7.898 2 1 1 0 651.6818 1873.0592 S58s Hydrogen 58 (R) sREVLELGQVLDTGK (R) S(0.99)REVLELGQVLDT(0.0)GK K:TMT10-Lys-Only,s:Phosphorylated S CNPY4 28651.5 1 1 6899.1 8.78 HUMAN 1 10.2475 4.654 ELSSEPQTPPAQKGT-p E9PGC8;T742-p ELSSEPQTPPAQKGT 0.159393285726736 0.0159716440659024 -0.284333333333333 -0.354333333333333 15.9761945018117 24.8197146695539 -0.284333333333333 -0.354333333333333 0.0252569293737981 0.00329631368168879 -3.06362071306805 -4.99208821981376 E9PGC8 NotFound E9PGC8.T742.p_NotFound E9PGC8_T742t _1_1_742_742 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10772.10772.2 18.02 14.71 3.677 3 1 1 0 975.5025 1870.0322 T742t TMT10 735 (K) ELSSEPQtPPAQK (G) ELS(0.0)S(0.0)EPQT(0.99)PPAQK K:TMT10,t:Phosphorylated T MAP1A 332906.7 2 6 20.1 1016.98 HUMAN 1 -15.9762 -24.8197 ELTDLDQSNVTEETP-p Q8NC51-3;S237-p ELTDLDQSNVTEETP 0.130013664511896 0.0428077317268441 -0.398333333333333 0.335333333333333 18.3228316422019 18.335498776293 -0.398333333333333 0.335333333333333 0.0147135285326592 0.0146706758820825 -3.52789734404734 3.52752884565674 Q8NC51 SERBP1 Q8NC51.3.S237.p_SERBP1 Q8NC51-3_S237sT240t_2_2_237_240 Q8NC51-3 Q8NC51-3|Q8NC51-4 Isoform 3 of Plasminogen activator inhibitor 1 RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19522.19522.5 21.31 16.9 4.242 5 2 2 0 1191.3596 5791.824 S237s N238n T240t TMT10 229 (K) DELTDLDQsnVtEETPEGEEHHPVADTENKENEVEEVKEEGPK (E) DELT(0.0)DLDQS(0.99)N(0.99)VT(0.99)EET(0.0)PEGEEHHPVADT(0.0)EN(0.0)KEN(0.0)EVEEVKEEGPK K:TMT10,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T SERBP1 43191.6 2 15 616.3 261.14 HUMAN 1 -18.3228 18.3355 ELTPAEYSPQLTRRM-p Q9Y6D9;S428-p ELTPAEYSPQLTRRM 0.909465039529785 0.544120842159125 -0.0183333333333333 0.0606666666666667 0.808806840423281 3.55447912283377 -0.0183333333333333 0.0606666666666667 0.830078788006959 0.441115265725779 -0.22520720291543 0.83081904148715 Q9Y6D9 MAD1L1 Q9Y6D9.S428.p_MAD1L1 Q9Y6D9_S428s _1_1_428_428 Q9Y6D9 Q9Y6D9|Q9Y6D9-3 Mitotic spindle assembly checkpoint protein MAD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25534.25534.3 19.26 19.26 1.112 7 1 1 0 874.0972 2540.3082 S428s TMT10 413 (R) AILGSYDSELTPAEYsPQLTR (R) AILGS(0.0)Y(0.0)DS(0.0)ELT(0.0)PAEY(0.0)S(0.99)PQLT(0.0)R s:Phosphorylated S MAD1L1 83350.7 4 1 3937.1 40.48 HUMAN 1 -0.8088 3.5545 ELVREQGSNNVIVTS-p Q9H6A9;S171-p ELVREQGSNNVIVTS 0.105885561453204 0.0368850339996155 -0.302 -0.353333333333333 20.5391074847024 19.2742453156519 -0.302 -0.353333333333333 0.00883261400148787 0.0118188567392118 -3.99561579613043 -3.72157538820034 Q9H6A9 PCNXL3 Q9H6A9.S171.p_PCNXL3 Q9H6A9_S171s _1_1_171_171 Q9H6A9 Q9H6A9|Q9H6A9-2 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18054.18054.3 16.67 16.67 4.214 3 1 1 0 843.7646 2449.3121 S171s TMT10 168 (R) EQGsNNVIVTSADREMLK (L) EQGS(0.99)NNVIVT(0.0)S(0.0)ADREMLK K:TMT10,s:Phosphorylated S PCNX3 224430.8 2 4 168.1 492.45 HUMAN 1 -20.5391 -19.2742 ELVRVSQTPIAAGTG-p Q12857-2;T234-p ELVRVSQTPIAAGTG 0.495936187342339 0.11022005435697 -0.129 0.31 5.60696898691686 12.6468343373816 -0.129 0.31 0.27498126233092 0.0543646462290903 -1.21421750717669 2.44632000381139 Q12857 NFIA Q12857.2.T234.p_NFIA Q12857-2_T234t_1_1_234_234 Q12857-2 Q12857-4|B1AKN8|Q12857-3|Q12857-2|B1AKN5|B1AKN7 Isoform 2 of Nuclear factor 1 A-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30727.30727.3 17.35 17.35 1.119 12 1 1 0 1240.2408 3637.7352 T234t N243n TMT10 231 (R) VSQtPIAAGTGPnFSLSDLESSSYYSMSPGAMR (R) VS(0.0)QT(0.99)PIAAGT(0.0)GPN(1.0)FS(0.0)LS(0.0)DLES(0.0)S(0.0)S(0.0)Y(0.0)Y(0.0)S(0.0)MS(0.0)PGAMR t:Phosphorylated T,n:Deamidated NFIA 55018.3 1 2 555.1 273.2 HUMAN 1 -5.607 12.6468 ELVSGGRSVRFSEAE-p P33993;S674-p ELVSGGRSVRFSEAE 0.337842177939104 0.740110122995943 0.203333333333333 0.041 8.77702540086615 1.80176846476941 0.203333333333333 0.0410000000000001 0.132524892286615 0.660424465721182 1.76976570896813 0.464388529460135 P33993 MCM7 P33993.S674.p_MCM7 P33993_S674s _1_1_674_674 P33993 P33993|P33993-3|P33993-2 DNA replication licensing factor MCM7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6387.6387.2 9.23 4.88 8.298 2 1 1 0 684.8643 1288.7535 S674s TMT10 667 (R) ELVSGGRsVR (F) ELVS(0.0)GGRS(0.99)VR s:Phosphorylated S MCM7 81934.1 2 8 1064.1 181.73 HUMAN 1 8.777 1.8018 ELVSRQHSPGSADSL-p O43439-4;S419-p ELVSRQHSPGSADSL 0.887353114485877 0.963177399077786 -0.032 -0.00866666666666664 1.01211273678928 0.232533627160921 -0.032 -0.00866666666666663 0.792115891662386 0.947865327562213 -0.276914026203045 -0.0684704672586132 O43439 CBFA2T2 O43439.4.S419.p_CBFA2T2 O43439-4_S419s _1_1_419_419 O43439-4 O43439-4|O43439-5|O43439-2 Isoform 4 of Protein CBFA2T2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20803.20803.4 10.14 10.14 1.207 8 1 1 0 1055.2477 4138.0419 S419s TMT10 417 (R) QHsPGSADSLSNDSQREFNSRPGTGYVPVEFWK (K) QHS(0.99)PGS(0.0)ADS(0.0)LS(0.0)NDS(0.0)QREFNS(0.0)RPGT(0.0)GY(0.0)VPVEFWK K:TMT10,s:Phosphorylated S CBFA2T2 68762.1 1 4 2492.1 81.27 HUMAN 1 -1.0121 -0.2325 ELVVRIASLEVENQS-p E9PRY8;S502-p ELVVRIASLEVENQS 0.0869754461573755 0.0235819629746551 -0.469 -0.516333333333333 22.6040766931445 22.1913941746383 -0.469 -0.516333333333333 0.00549025265565657 0.00603754780557152 -4.46145024796114 -4.36117040786566 E9PRY8 NotFound E9PRY8.S502.p_NotFound E9PRY8_S502s _1_1_502_502 E9PRY8 E9PRY8|P29692-2 Elongation factor 1-delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19459.19459.2 13.45 6.79 4.485 2 1 1 0 834.4329 1587.8904 S502s TMT10 500 (R) IAsLEVENQSLR (G) IAS(0.99)LEVENQS(0.0)LR s:Phosphorylated S EEF1D 77196.2 1 5 369.1 339.47 HUMAN 1 -22.6041 -22.1914 ELWGPAASPDGSSAT-p Q8N0Y2;S104-p ELWGPAASPDGSSAT 0.582575200829836 0.124731210302902 0.0916666666666667 0.184 4.31886099673713 11.9235575406793 0.0916666666666667 0.184 0.369925185559423 0.0642161472661033 0.977610255862959 2.31763539616978 Q8N0Y2 ZNF444 Q8N0Y2.S104.p_ZNF444 Q8N0Y2_S104s _1_1_104_104 Q8N0Y2 Q8N0Y2|Q8N0Y2-2 Zinc finger protein 444 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36634.36634.4 30.26 26.94 3.774 5 1 1 0 816.392 3182.5803 S104s TMT10 84 (R) QPQSGEEAVALLEELWGPAAsPDGSSATR (V) QPQS(0.0)GEEAVALLEELWGPAAS(0.99)PDGS(0.0)S(0.0)AT(0.0)R s:Phosphorylated S ZNF444 35830.9 3 2 2043.1 101.06 HUMAN 1 4.3189 11.9236 ELYKADRSPSLSVAP-p Q5VWN6;S219-p ELYKADRSPSLSVAP 0.969977322086965 0.284885962405904 -0.00866666666666668 -0.108666666666667 0.26020529452762 7.19211797256397 -0.00866666666666667 -0.108666666666667 0.94184507368922 0.190892208610323 -0.0764013927741928 -1.4941780901628 Q5VWN6 FAM208B Q5VWN6.S219.p_FAM208B Q5VWN6_S219s _1_1_219_219 Q5VWN6 Q5VWN6|Q5VWN6-2 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8171.8171.3 16.36 12.68 1.857 3 1 1 0 603.3012 1727.9238 S219s TMT10 216 (K) ADRsPSLSVAPQDR (M) ADRS(0.99)PS(0.0)LS(0.0)VAPQDR s:Phosphorylated S FAM208B 271861.7 1 2 275.1 391.61 HUMAN 1 -0.2602 -7.1921 ELYSLNDYKPPISKA-p A0A0A0MT33;Y95-p ELYSLNDYKPPISKA 0.19883450572533 0.0189613448383213 0.207333333333333 0.352 13.6554380385762 23.6850257238038 0.207333333333333 0.352 0.0430979086352881 0.00428052884168078 2.62987123919711 4.71277687455562 A0A0A0MT33 SCAF8 A0A0A0MT33.Y95.p_SCAF8 A0A0A0MT33_Y95y_1_1_95_95 A0A0A0MT33 A0A0A0MT33|Q9UPN6 Protein SCAF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23856.23856.4 14.7 14.7 3.173 6 1 1 0 721.885 2803.5485 N93n Y95y TMT10 84 (K) TFNSELYSLnDyKPPISK (A) T(0.0)FN(0.0)S(0.0)ELY(0.0)S(0.0)LN(0.99)DY(0.99)KPPIS(0.0)K K:TMT10,n:Deamidated,y:Phosphorylated Y SCAF8 149312.7 1 1 2085.1 98.15 HUMAN 1 13.6554 23.685 EMAEAPGSPRQQGLG-p Q66K89;S165-p EMAEAPGSPRQQGLG 0.476191108374854 0.0438410121432512 0.0946666666666666 0.318666666666667 5.93092770470791 18.1941671528636 0.0946666666666667 0.318666666666667 0.25521560735137 0.0151559542177824 1.27224914566254 3.49876470230354 Q66K89 E4F1 Q66K89.S165.p_E4F1 Q66K89_S165s _1_1_165_165 Q66K89 Q66K89 Transcription factor E4F1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27163.27163.4 21.62 19.22 99 1 1 1 0 1108.3037 4350.2288 S165s TMT10 145 (K) EVIVAAEAELGDGEMAEAPGsPRQQGLGLAGEGEQAQVK (L) EVIVAAEAELGDGEMAEAPGS(1.0)PRQQGLGLAGEGEQAQVK K:TMT10,s:Phosphorylated S E4F1 84864.2 1 2 2210.1 93.39 HUMAN 1 5.9309 18.1942 EMATLQYTNPQLLEQ-p Q9C0J8;T551-p EMATLQYTNPQLLEQ 0.693213743392238 0.741322492483223 0.0653333333333333 -0.043 2.98599498085781 1.79182996512 0.0653333333333334 -0.0429999999999999 0.502806058373365 0.66193752759731 0.717566283559795 -0.462139655786002 Q9C0J8 WDR33 Q9C0J8.T551.p_WDR33 Q9C0J8_T551t _1_1_551_551 Q9C0J8 Q9C0J8 pre-mRNA 3' end processing protein WDR33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26365.26365.4 21.02 21.02 2.122 4 1 1 0 1018.8101 3992.2548 T551t TMT10 535 (K) KKTQAEIEQEMATLQYtNPQLLEQLK (I) KKT(0.0)QAEIEQEMAT(0.0)LQY(0.0)T(0.99)NPQLLEQLK K:TMT10,t:Phosphorylated T WDR33 146288 1 3 2264.1 90.7 HUMAN 1 2.986 -1.7918 EMATRFGSTLQLDLE-p Q9Y3T6;S236-p EMATRFGSTLQLDLE 0.877553317535676 0.00916734196128833 0.0763333333333333 -0.628 1.11528936726086 28.816813996671 0.0763333333333334 -0.628 0.773519138039207 0.00131316288779202 0.302552676888568 -6.07093261587069 Q9Y3T6 R3HCC1 Q9Y3T6.S236.p_R3HCC1 Q9Y3T6_S236s _1_1_236_236 Q9Y3T6 Q9Y3T6|A0A0R4J2E2|Q9Y3T6-3|A0A0D9SF44 R3H and coiled-coil domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28716.28716.2 12.97 12.97 1.105 2 1 1 0 894.9818 1708.9886 S236s TMT10 234 (R) FGsTLQLDLEK (G) FGS(0.99)T(0.0)LQLDLEK K:TMT10,s:Phosphorylated S R3HCC1 49490.1 3 1 6231.1 12.97 HUMAN 1 1.1153 -28.8168 EMDEGSQSLEKLDVS-p Q8WYP5-2;S1332-p EMDEGSQSLEKLDVS 0.189541436229745 0.022888536732408 -0.221 0.321333333333333 14.1321860355532 22.393622937127 -0.221 0.321333333333333 0.0386172546903518 0.00576285518461311 -2.71722049054068 4.40775698139584 Q8WYP5 AHCTF1 Q8WYP5.2.S1332.p_AHCTF1 Q8WYP5-2_S1330sS1332s_2_2_1330_1332 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9106.9106.3 16.23 16.23 99 2 2 2 0 755.6572 2105.0221 S1330s S1332s TMT10 1322 (K) EHQEMDEGsQsLEK (L) EHQEMDEGS(1.0)QS(1.0)LEK K:TMT10,s:Phosphorylated S AHCTF1 258049.6 3 42 40.1 829.79 HUMAN 1 -14.1322 22.3936 EMDIEMDSGDEA___-p Q9UBB5;S407-p EMDIEMDSGDEA___ 0.39245931987608 0.0284084393444339 0.153333333333333 0.285333333333333 7.49169372219291 20.9471554673878 0.153333333333333 0.285333333333333 0.178168378604506 0.00804052586381019 1.54683629892005 4.08118148324205 Q9UBB5 MBD2 Q9UBB5.S407.p_MBD2 Q9UBB5_S407s_1_1_407_407 Q9UBB5 Q9UBB5 Methyl-CpG-binding domain protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14888.14888.2 10.92 10.92 10.918 2 1 1 0 1077.4025 2057.8365 M405m S407s TMT10 395 (R) AADTEEMDIEmDsGDEA (-) AADT(0.0)EEM(0.0)DIEM(0.99)DS(0.99)GDEA m:Oxidized methionine,s:Phosphorylated S MBD2 43596.1 5 4 2176.1 94.49 HUMAN 1 7.4917 20.9472 EMDPIDCTPPEYILP-p O75153;T185-p EMDPIDCTPPEYILP 0.142230539633047 0.594138421297815 0.329 -0.0943333333333333 17.3045267651979 3.06056991513261 0.329 -0.0943333333333334 0.0186014724561695 0.494245823934497 3.32285670518408 -0.732584088118653 O75153 CLUH O75153.T185.p_CLUH O75153_T185t _1_1_185_185 O75153 O75153 Clustered mitochondria protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28717.28717.3 14.38 14.38 8.577 3 1 1 0 857.0698 2489.2254 T185t TMT10 176 (K) GLEMDPIDCtPPEYILPGSR (E) GLEMDPIDCT(0.99)PPEY(0.0)ILPGS(0.0)R C:Carbamidomethylation,t:Phosphorylated T CLUH 148093.5 1 2 2371.1 86.28 HUMAN 1 17.3045 -3.0606 EMDRKQPSPAPTPTA-p Q9BYV9;S315-p EMDRKQPSPAPTPTA 0.837364178896337 0.0529355983987602 -0.0306666666666667 -0.283333333333333 1.4907643288544 17.0244407343164 -0.0306666666666667 -0.283333333333333 0.709452898073749 0.0198406513972887 -0.392822423339072 -3.26495782976194 Q9BYV9 BACH2 Q9BYV9.S315.p_BACH2 Q9BYV9_S315s _1_1_315_315 Q9BYV9 Q9BYV9 Transcription regulator protein BACH2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12137.12137.3 17.6 13.17 1.637 3 1 1 0 853.4455 2478.3539 S315s TMT10 312 (R) KQPsPAPTPTAPAGAACLER (S) KQPS(0.99)PAPT(0.0)PT(0.0)APAGAACLER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BACH2 94703 1 1 4791.1 26.58 HUMAN 1 -1.4908 -17.0244 EMDRNFDTLDLPKRT-p O00192;T642-p EMDRNFDTLDLPKRT 0.710962737832948 0.0144251158982194 -0.0836666666666667 0.455333333333333 2.78718305842278 25.5202060522185 -0.0836666666666667 0.455333333333333 0.526358564893634 0.00280530053653415 -0.676845068847046 5.17011839524007 O00192 ARVCF O00192.T642.p_ARVCF O00192_T642t _1_1_642_642 O00192 O00192|E9PDC3|O00192-2|C9JJX6 Armadillo repeat protein deleted in velo-cardio-facial syndrome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20541.20541.3 14.09 14.09 99 1 1 1 0 768.7032 2224.132 T642t TMT10 633 (K) DGEMDRNFDtLDLPK (R) DGEMDRNFDT(1.0)LDLPK K:TMT10,t:Phosphorylated T ARVCF 105324.7 9 6 772.1 227.53 HUMAN 1 -2.7872 25.5202 EMEEMNTSEEEESPC-p Q8WWL2;S423-p EMEEMNTSEEEESPC 0.599561298261351 0.0596176218583099 0.0726666666666667 0.255333333333333 4.10322700814825 16.3154608624449 0.0726666666666666 0.255333333333333 0.388756173894845 0.0233589820938909 0.936810805835081 3.12673527662885 Q8WWL2 SPIRE2 Q8WWL2.S423.p_SPIRE2 Q8WWL2_T422tS423s_2_2_422_423 Q8WWL2 Q8WWL2|Q8WWL2-2|Q8WWL2-3|Q8WWL2-4 Protein spire homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23635.23635.4 16.52 16.52 7.752 5 2 2 0 922.1588 3525.6799 T422t S423s TMT10 411 (K) APTLAEMEEMNtsEEEESPCGEVTLKR (D) APT(0.0)LAEMEEMNT(0.99)S(0.99)EEEES(0.0)PCGEVT(0.0)LKR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S SPIRE2 80924.6 2 8 1538.1 133.27 HUMAN 1 4.1032 16.3155 EMEEVHPSDEEEEDA-p E9PGC8;S905-p EMEEVHPSDEEEEDA 0.171984860191903 0.0221482115607153 -0.421 0.308 15.2256773246407 22.5994160083427 -0.421 0.308 0.0300214916987781 0.00549614775064614 -2.9208852900265 4.45548515398524 E9PGC8 NotFound E9PGC8.S905.p_NotFound E9PGC8_S905s _1_1_905_905 E9PGC8 E9PGC8 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17392.17392.3 20.19 20.19 7.445 2 1 1 0 995.44 2904.3345 S905s TMT10 894 (K) AELEEMEEVHPsDEEEEDATK (A) AELEEMEEVHPS(0.99)DEEEEDAT(0.0)K K:TMT10,s:Phosphorylated S MAP1A 332906.7 5 12 20.1 1016.98 HUMAN 1 -15.2257 22.5994 EMENIMHSQNCEIKE-p Q8TDY2;S943-p EMENIMHSQNCEIKE 0.0364692698286226 0.00759621931992593 0.548 0.643666666666667 32.9772476346871 30.2650527523799 0.548 0.643666666666667 0.000503819806220985 0.000940794402434541 7.39165262028115 6.50274619746769 Q8TDY2 RB1CC1 Q8TDY2.S943.p_RB1CC1 Q8TDY2_S943s _1_1_943_943 Q8TDY2 Q8TDY2|Q8TDY2-2 RB1-inducible coiled-coil protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24596.24596.4 13.57 11.98 99 1 1 1 0 632.5609 2447.2497 S943s TMT10 934 (K) LLEMENIMHsQNCEIK (E) LLEMENIMHS(1.0)QNCEIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RB1CC1 185198.6 1 10 707.1 238.96 HUMAN 1 32.9772 30.2651 EMEVKRESYARERST-p Q92575;S311-p EMEVKRESYARERST 0.28377835512685 0.134741245946044 -0.17 -0.164666666666667 10.3231116725146 11.4732884039084 -0.17 -0.164666666666667 0.092830103090167 0.0712313474240539 -2.03790618037261 -2.2381839515848 Q92575 UBXN4 Q92575.S311.p_UBXN4 Q92575_S311s _1_1_311_311 Q92575 Q92575 UBX domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7518.7518.4 10.37 10.37 10.374 2 1 1 0 534.5238 2055.1057 S311s TMT10 302 (K) QAEMEVKREsYAR (E) QAEMEVKRES(0.99)Y(0.0)AR K:TMT10,s:Phosphorylated S UBXN4 57061.8 1 1 3884.1 41.41 HUMAN 1 -10.3231 -11.4733 EMGSQDGSPLRETRK-p Q9UJ14;S83-p EMGSQDGSPLRETRK 0.237800187730078 0.167393464045555 0.179666666666667 -0.165333333333333 11.9540636665273 10.2113338685442 0.179666666666667 -0.165333333333333 0.063766654632577 0.0952503572306329 2.32418941010285 -2.01761605432147 Q9UJ14 GGT7 Q9UJ14.S83.p_GGT7 Q9UJ14_S83s _1_1_83_83 Q9UJ14 Q9UJ14|Q9UJ14-5 Glutathione hydrolase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11809.11809.4 11.52 11.52 11.516 7 1 1 0 707.5947 2747.3944 S83s TMT10 67 (R) LQRLPSSSSEMGSQDGsPLRETR (K) LQRLPS(0.0)S(0.0)S(0.0)S(0.0)EMGS(0.0)QDGS(0.99)PLRET(0.0)R s:Phosphorylated S GGT7 70864.9 4 2 3765.1 43.62 HUMAN 1 11.9541 -10.2113 EMGWQEDSENDETCA-p D4PHA4;S418-p EMGWQEDSENDETCA 0.347832387505582 0.927732650560107 0.131333333333333 -0.011 8.52155943454379 0.45901020847727 0.131333333333333 -0.011 0.140554274095652 0.899702607516009 1.72553969053508 -0.132055399852805 D4PHA4 GPBP1 D4PHA4.S418.p_GPBP1 D4PHA4_S418s_1_1_418_418 D4PHA4 D4PHA4|Q86WP2-2|Q86WP2-3|Q86WP2-4 GC-rich promoter binding protein 1, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18133.18133.3 21.71 21.71 1.152 3 1 1 0 1033.0704 3001.2335 M412m S418s TMT10 411 (K) EmGWQEDsENDETCAPLTEDEMR (E) EM(0.99)GWQEDS(0.99)ENDET(0.0)CAPLT(0.0)EDEM(0.0)R C:Carbamidomethylation,m:Oxidized methionine,s:Phosphorylated S GPBP1 55695.9 6 6 1428.1 143.61 HUMAN 1 8.5216 -0.459 EMKTNQGSMENLCPG-p Q6PFW1;S944-p EMKTNQGSMENLCPG 0.271002123051664 0.00744986350418111 -0.355333333333333 0.492666666666667 10.7461291286262 30.429071701059 -0.355333333333333 0.492666666666667 0.0842145412345968 0.000905926220783936 -2.11169038567349 6.55315601405022 Q6PFW1 PPIP5K1 Q6PFW1.S944.p_PPIP5K1 Q6PFW1_S944s _1_1_944_944 Q6PFW1 Q6PFW1|Q6PFW1-2|B7WPL9|F8W9A8|Q6PFW1-3|Q6PFW1-4 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15427.15427.4 15.84 15.84 3.425 5 1 1 0 1203.0505 4729.2206 S944s TMT10 915 (K) GVEEEGSAPAGCGFRPASSENEEMKTNQGsMENLCPGK (A) GVEEEGS(0.0)APAGCGFRPAS(0.0)S(0.0)ENEEMKT(0.0)NQGS(0.99)MENLCPGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PPIP5K1 161343.9 10 2 1248.1 162.13 HUMAN 1 -10.7461 30.4291 EMLMDEGTSDEKGHM-p Q9Y6X4;T503-p EMLMDEGTSDEKGHM 0.915262614364166 0.0135344272024368 0.0236666666666667 0.369666666666667 0.753428895663581 25.9724296867576 0.0236666666666667 0.369666666666667 0.840731095093895 0.00252788336112765 0.210831209087464 5.28741853377971 Q9Y6X4 FAM169A Q9Y6X4.T503.p_FAM169A Q9Y6X4_T503t _1_1_503_503 Q9Y6X4 Q9Y6X4|D6RB01 Soluble lamin-associated protein of 75 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23214.23632.3 13.13 13.64 1.128 3 1 1 0 779.0212 2255.0823 T503t TMT10 492 (R) IPDSEMLMDEGtSDEK (G) IPDS(0.0)EMLMDEGT(0.99)S(0.0)DEK K:TMT10,t:Phosphorylated T FAM169A 75295.8 1 9 731.1 236 HUMAN 1 0.7534 25.9724 EMLSTHSSPYKTLER-p Q9Y2L6;S648-p EMLSTHSSPYKTLER 0.391518643244044 0.0058535409001474 0.115666666666667 -0.602666666666667 7.50839153539506 32.2694235597396 0.115666666666667 -0.602666666666667 0.177484669612602 0.000593004028944534 1.54974324438357 -7.14097899147995 Q9Y2L6 FRMD4B Q9Y2L6.S648.p_FRMD4B Q9Y2L6_S648s _1_1_648_648 Q9Y2L6 Q9Y2L6|Q9Y2L6-2|E9PGA7 FERM domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11098.11098.3 13.27 13.27 1.144 5 1 1 0 606.6353 1737.9246 S648s TMT10 641 (R) EMLSTHSsPYK (T) EMLS(0.0)T(0.0)HS(0.0)S(0.99)PY(0.0)K K:TMT10,s:Phosphorylated S FRMD4B 118900.4 1 2 1893.1 108.71 HUMAN 1 7.5084 -32.2694 EMNGKEISPGSGPGE-p O43491;S715-p EMNGKEISPGSGPGE 0.503993959612623 0.135431851316749 0.109666666666667 -0.176333333333333 5.49319523995802 11.4452777090964 0.109666666666667 -0.176333333333333 0.282280238697816 0.0716922530587644 1.1937202372231 -2.23325636423938 O43491 EPB41L2 O43491.S715.p_EPB41L2 O43491_S715s _1_1_715_715 O43491 O43491|E9PHY5|O43491-4|E9PK52|Q6R5J7 Band 4.1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18556.18556.4 17.95 17.95 5.475 3 1 1 0 685.3513 2658.4173 S715s TMT10 704 (R) VITEEMNGKEIsPGSGPGEIR (K) VIT(0.0)EEMNGKEIS(0.99)PGS(0.0)GPGEIR K:TMT10,s:Phosphorylated S EPB41L2 113099.5 6 12 469.1 302.69 HUMAN 1 5.4932 -11.4453 EMPQDLRSPARTPPS-p O43765;S77-p EMPQDLRSPARTPPS 0.175973502111451 0.277727712963128 -0.448333333333333 0.201333333333333 14.9993843758605 7.33050787127034 -0.448333333333333 0.201333333333333 0.0316272595332692 0.184905237504021 -2.87833571204195 1.51831228422519 O43765 SGTA O43765.S77.p_SGTA O43765_S77s _1_1_77_77 O43765 O43765 Small glutamine-rich tetratricopeptide repeat-containing protein alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12574.12574.5 18.82 18.82 3.91 4 1 1 0 696.3462 3397.7422 S77s TMT10 70 (K) EMPQDLRsPARTPPSEEDSAEAERLK (T) EMPQDLRS(0.99)PART(0.0)PPS(0.0)EEDS(0.0)AEAERLK K:TMT10,s:Phosphorylated S SGTA 34290.7 10 1 2055.1 100.31 HUMAN 1 -14.9994 7.3305 EMPVNYGSPPNLVEI-p Q9NSI6-2;S145-p EMPVNYGSPPNLVEI 0.682078728827876 0.549533124162468 0.099 0.0586666666666667 3.11502218626878 3.49928406373982 0.099 0.0586666666666667 0.488087607807994 0.446757234196754 0.74367932375076 0.819993079493278 Q9NSI6 BRWD1 Q9NSI6.2.S145.p_BRWD1 Q9NSI6-2_S145s _1_1_145_145 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19325.19325.4 14.9 14.9 5.099 2 1 1 0 667.8358 2588.3605 S145s TMT10 134 (R) GRPPEMPVNYGsPPNLVEIHR (G) GRPPEMPVNY(0.0)GS(0.99)PPNLVEIHR s:Phosphorylated S BRWD1 259915.1 3 2 208.1 444.81 HUMAN 1 3.115 3.4993 EMQKYFDSGDYNMAK-p Q5T5H1;S83-p EMQKYFDSGDYNMAK 0.746396283671232 0.0243892485493935 0.0553333333333333 0.355666666666667 2.41204082152335 21.9682421454592 0.0553333333333333 0.355666666666667 0.573846738775061 0.0063558814106414 0.598234407294219 4.31012153653825 Q5T5H1 NotFound Q5T5H1.S83.p_NotFound Q5T5H1_S83s _1_1_83_83 Q5T5H1 Q5T5H1|O43768-4|A6NMQ3|O43768-3|O43768-7|O43768-9|H3BMD8|O43768-2|O43768-5|O43768-6|P56211|P56211-2|H3BQ52 Alpha-endosulfine HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19130.19130.3 13.71 13.71 2.409 3 1 1 0 616.9473 1768.8616 S83s TMT10 80 (K) YFDsGDYNMAK (A) Y(0.0)FDS(0.99)GDY(0.0)NMAK K:TMT10,s:Phosphorylated S ENSA 21164.7 9 8 1520.1 134.39 HUMAN 1 2.412 21.9682 EMREDGLSPNESKLC-p Q96BU1;S187-p EMREDGLSPNESKLC 0.118247229564978 0.0575872308781101 -0.369666666666667 0.259666666666667 19.2948281227247 16.5136653442891 -0.369666666666667 0.259666666666667 0.0117629753715622 0.0223168793514903 -3.72922055543987 3.16512531630666 Q96BU1 S100PBP Q96BU1.S187.p_S100PBP Q96BU1_S187s _1_1_187_187 Q96BU1 Q96BU1 S100P-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20366.20366.4 15.02 12.9 4.878 4 1 1 0 654.8215 2536.2965 S187s TMT10 174 (K) LSSLGEEMREDGLsPNESK (L) LS(0.0)S(0.0)LGEEMREDGLS(0.99)PNES(0.0)K K:TMT10,s:Phosphorylated S S100PBP 45923.5 1 2 3207.1 57.45 HUMAN 1 -19.2948 16.5137 EMRERLGTGGFGNVC-p O15111;T23-p EMRERLGTGGFGNVC 0.101218422745456 0.0887888728831579 -0.486666666666667 -0.691666666666667 21.0413984073669 13.917748143635 -0.486666666666667 -0.691666666666667 0.00786792405528448 0.0405718849830236 -4.10609621654292 -2.67623530985834 O15111 CHUK O15111.T23.p_CHUK O15111_T23t _1_1_23_23 O15111 O15111 Inhibitor of nuclear factor kappa-B kinase subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19353.19353.3 17.36 17.36 10.486 2 1 1 0 663.3181 1907.9748 T23t TMT10 21 (R) LGtGGFGNVCLYQHR (E) LGT(0.99)GGFGNVCLY(0.0)QHR C:Carbamidomethylation,t:Phosphorylated T CHUK 85779.2 1 1 4265.1 34.5 HUMAN 1 -21.0414 -13.9177 EMVPDLPSPPMEAPA-p Q6ZVM7;S479-p EMVPDLPSPPMEAPA 0.499687822773741 0.988520181148994 0.121666666666667 -0.00166666666666665 5.55343007804602 0.076574887989748 0.121666666666667 -0.00166666666666666 0.278392154590447 0.982522514913996 1.20458003954901 -0.0229350134718285 Q6ZVM7 TOM1L2 Q6ZVM7.S479.p_TOM1L2 Q6ZVM7_S479s _1_1_479_479 Q6ZVM7 Q6ZVM7|Q6ZVM7-5|Q6ZVM7-3|Q6ZVM7-2 TOM1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24391.24391.3 15.01 15.01 9.237 3 1 1 0 933.4416 2718.3429 S479s TMT10 470 (K) AAEMVPDLPsPPMEAPAPASNPSGR (K) AAEMVPDLPS(0.99)PPMEAPAPAS(0.0)NPS(0.0)GR s:Phosphorylated S TOM1L2 55897.7 3 7 2215.1 93.2 HUMAN 1 5.5534 -0.0766 EMWYKRHSIAIGEVP-p Q8WUY9;S160-p EMWYKRHSIAIGEVP 0.952209593971326 0.099032122865683 -0.03 0.282 0.422303537004851 13.271033999301 -0.03 0.282 0.907339141679133 0.0470865206101139 -0.121950544417227 2.55858350384265 Q8WUY9 DEPDC1B Q8WUY9.S160.p_DEPDC1B Q8WUY9_S160s _1_1_160_160 Q8WUY9 Q8WUY9|Q8WUY9-2 DEP domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7880.7880.3 8.87 8.87 99 1 1 1 0 592.3035 1694.9322 S160s TMT10 158 (K) RHsIAIGEVPACR (L) RHS(1.0)IAIGEVPACR C:Carbamidomethylation,s:Phosphorylated S DEPDC1B 62511.8 1 1 4334.1 33.31 HUMAN 1 -0.4223 13.271 EMYGGGESDKDS___-p Q9Y6N8;S784-p EMYGGGESDKDS___ 0.135547194579556 0.00230682915932072 0.311666666666667 0.858333333333333 17.8058743253518 40.64638747499 0.311666666666667 0.858333333333334 0.0165734364542549 8.61710237328592e-05 3.4230840567776 10.425956651677 Q9Y6N8 CDH10 Q9Y6N8.S784.p_CDH10 Q9Y6N8_S784s _1_1_784_784 Q9Y6N8 Q9Y6N8 Cadherin-10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17136.17136.2 16.57 16.57 1.416 3 1 1 0 998.9526 1916.9312 S784s TMT10 775 (K) LAEMYGGGEsDKDS (-) LAEMY(0.0)GGGES(0.99)DKDS(0.0) K:TMT10,s:Phosphorylated S CDH10 88849.1 2 1 5751.1 16.57 HUMAN 1 17.8059 40.6464 ENATSGETLEENEAG-p Q9UQ80;T386-p ENATSGETLEENEAG 0.635899433251932 0.00930867383025303 0.0803333333333333 0.603 3.66655028508762 28.6777983988512 0.0803333333333334 0.603 0.429877754352983 0.00135587658270779 0.852828428288633 6.03070335919157 Q9UQ80 PA2G4 Q9UQ80.T386.p_PA2G4 Q9UQ80_T386t _1_1_386_386 Q9UQ80 Q9UQ80|Q9UQ80-2 Proliferation-associated protein 2G4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.9363.9363.2 15.64 15.64 4.1 4 1 1 0 1073.9484 2066.9199 T386t TMT10 377 (K) TAENATSGEtLEENEAGD (-) T(0.0)AENAT(0.0)S(0.0)GET(0.99)LEENEAGD t:Phosphorylated T PA2G4 44128.4 2 7 1457.1 140.36 HUMAN 1 3.6666 28.6778 ENCDFLFSPPEVTGR-p Q9Y6A5;S25-p ENCDFLFSPPEVTGR 0.651183474642633 0.0371065498012588 -0.0636666666666667 -0.275333333333333 3.49388863259188 19.2338663416524 -0.0636666666666667 -0.275333333333333 0.447312605245746 0.0119292561993726 -0.819059145239305 -3.71311885322792 Q9Y6A5 TACC3 Q9Y6A5.S25.p_TACC3 Q9Y6A5_S25s _1_1_25_25 Q9Y6A5 Q9Y6A5|Q8IX09|F8WC55 Transforming acidic coiled-coil-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24875.25082.3 19.25 19.25 7.733 3 1 1 0 764.6791 2212.0542 S25s TMT10 16 (K) NTENCDFLFsPPEVTGR (S) NT(0.0)ENCDFLFS(0.99)PPEVT(0.0)GR C:Carbamidomethylation,s:Phosphorylated S TACC3 91213.8 2 1 1278.1 159 HUMAN 1 -3.4939 -19.2339 ENCERRQTEPVSPVL-p Q8IYH5;T109-p ENCERRQTEPVSPVL 0.184234271280265 0.00924136375925343 0.657333333333333 -0.808333333333333 14.4425123512022 28.7391986432642 0.657333333333334 -0.808333333333333 0.035954128385918 0.00133684216684693 2.77453306247043 -6.04844607619321 Q8IYH5 ZZZ3 Q8IYH5.T109.p_ZZZ3 Q8IYH5_T109t _1_1_109_109 Q8IYH5 Q8IYH5|Q8IYH5-2|Q8IYH5-4 ZZ-type zinc finger-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9549.9549.3 11.36 11.36 2.41 2 1 1 0 521.6227 1482.8841 T109t Hydrogen 108 (R) QtEPVSPVLKR (I) QT(0.99)EPVS(0.0)PVLKR K:TMT10-Lys-Only,t:Phosphorylated T ZZZ3 103390.7 1 3 1027.1 186.83 HUMAN 1 14.4425 -28.7392 ENCRNLASLGNQVDK-p Q8N988-2;S81-p ENCRNLASLGNQVDK 0.181449015780176 0.00271391575342825 -0.484 0.878 14.5979509791284 38.9947514084233 -0.484 0.878 0.034690048105371 0.000126044778427148 -2.8033811347375 9.6882793340445 Q8N988 ZNF557 Q8N988.2.S81.p_ZNF557 Q8N988-2_S81s_1_1_81_81 Q8N988-2 Q8N988-2 Isoform 2 of Zinc finger protein 557 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5477.5477.3 7.03 2.05 0.25 1 1 1 0 913.7776 2658.3653 S81s N84n Hydrogen 70 (R) DVMLENCRNLAsLGnQVDKPR (L) DVMLEN(0.33)CRN(0.33)LAS(1.0)LGN(0.33)QVDKPR C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated ZNF557 50597 1 99 240.83 415.72 HUMAN 1 -14.598 38.9948 ENCSSLGSPSEPPQT-p Q96P16;S156-p ENCSSLGSPSEPPQT 0.911753399332893 0.165553280090956 -0.0163333333333333 0.155 0.781978107321643 10.2701537822639 -0.0163333333333333 0.155 0.835222507738174 0.0939690035856899 -0.218258802713949 2.02784183081803 Q96P16 RPRD1A Q96P16.S156.p_RPRD1A Q96P16_S156s _1_1_156_156 Q96P16 Q96P16|A0A0C4DGQ6|Q96P16-3 Regulation of nuclear pre-mRNA domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22063.22266.4 29.99 25.35 2.098 7 1 1 0 986.7323 3863.9373 S156s TMT10 139 (R) TYEQIKVDENENCSSLGsPSEPPQTLDLVR (A) T(0.0)Y(0.0)EQIKVDENENCS(0.0)S(0.0)LGS(0.99)PS(0.0)EPPQT(0.0)LDLVR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RPRD1A 35947.2 9 1 2828.1 68.97 HUMAN 1 -0.782 10.2702 ENDFLAGSPDAAIDS-p A1L020;S308-p ENDFLAGSPDAAIDS 0.72917863756608 0.313720410774928 0.0473333333333333 -0.0983333333333333 2.60397391049785 6.65456806466868 0.0473333333333333 -0.0983333333333333 0.549038259269234 0.216044489499443 0.638759537023748 -1.40003325559627 A1L020 MEX3A A1L020.S308.p_MEX3A A1L020_S308s _1_1_308_308 A1L020 A1L020 RNA-binding protein MEX3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26941.26941.3 11.56 11.56 11.562 3 1 1 0 911.7603 2653.2943 S308s TMT10 295 (K) ILEYNNENDFLAGsPDAAIDSR (Y) ILEY(0.0)NNENDFLAGS(0.99)PDAAIDS(0.0)R s:Phosphorylated S MEX3A 55085.2 3 1 2523.1 80 HUMAN 1 2.604 -6.6546 ENDHLFLSLTEQRKD-p Q13137-4;S295-p ENDHLFLSLTEQRKD 0.691324386103875 0.509251692313356 -0.128 0.134 3.00615900477707 3.92928556940901 -0.128 0.134 0.500476972059264 0.404642451412324 -0.721662984362822 0.90343709351079 Q13137 CALCOCO2 Q13137.4.S295.p_CALCOCO2 Q13137-4_S295s _1_1_295_295 Q13137-4 Q13137-4|Q13137-3|Q13137-2|Q13137-5 Isoform 4 of Calcium-binding and coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18659.18659.4 12.03 12.03 1.56 2 1 1 0 567.8011 2188.2126 S295s TMT10 288 (K) ENDHLFLsLTEQRK (D) ENDHLFLS(0.99)LT(0.0)EQRK K:TMT10,s:Phosphorylated S CALCOCO2 55986 1 1 1533.1 133.47 HUMAN 1 -3.0062 3.9293 ENDKLRESLSRKTVS-p Q96SN8;S1483-p ENDKLRESLSRKTVS 0.278229403221185 0.0278103949284871 -0.265 -0.842333333333333 10.5119535049204 21.0857908296943 -0.265 -0.842333333333333 0.0888801235240113 0.00778790987488608 -2.0708118723213 -4.11182812781151 Q96SN8 CDK5RAP2 Q96SN8.S1483.p_CDK5RAP2 Q96SN8_S1483s _1_1_1483_1483 Q96SN8 Q96SN8 CDK5 regulatory subunit-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6535.6535.3 8.56 3.19 1.506 2 1 1 0 390.5461 1089.6578 S1483s TMT10 1480 (K) LREsLSR (K) LRES(0.99)LS(0.0)R s:Phosphorylated S CDK5RAP2 216574.2 1 7 932.1 199.16 HUMAN 1 -10.512 -21.0858 ENDNDNESDHDEADS-p Q9NRG0;S124-p ENDNDNESDHDEADS 0.161724665136218 0.124300964790296 0.391666666666667 -0.49 15.8374194790955 11.945239148936 0.391666666666667 -0.49 0.0260770255244194 0.063896355116307 3.03703498787432 -2.32147319960977 Q9NRG0 CHRAC1 Q9NRG0.S124.p_CHRAC1 Q9NRG0_S124s _1_1_124_124 Q9NRG0 Q9NRG0 Chromatin accessibility complex protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3435.3435.4 25.76 25.76 8.591 2 1 1 0 822.8303 3208.331 S124s TMT10 109 (K) EEKREEDEENDNDNEsDHDEADS (-) EEKREEDEENDNDNES(0.99)DHDEADS(0.0) K:TMT10,s:Phosphorylated S CHRAC1 14767.3 11 1 3595.1 47.5 HUMAN 1 15.8374 -11.9452 ENDTVTISPKQEGFP-p Q9UGU0;S1522-p ENDTVTISPKQEGFP 0.349309518247647 0.693930944343975 -0.190333333333333 0.038 8.48651951972963 2.17883147880518 -0.190333333333333 0.038 0.141692886630574 0.605503770862713 -1.71947232608832 0.547985403113189 Q9UGU0 TCF20 Q9UGU0.S1522.p_TCF20 Q9UGU0_S1522s _1_1_1522_1522 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17653.18274.3 15.58 15.58 1.116 3 1 1 0 885.4731 2574.4382 S1522s TMT10 1515 (K) ENDTVTIsPKQEGFPPK (G) ENDT(0.0)VT(0.0)IS(0.99)PKQEGFPPK K:TMT10,s:Phosphorylated S TCF20 213250.7 10 23 197.1 457.96 HUMAN 1 -8.4865 2.1788 ENEDEGDSDGERKHQ-p Q5TAP6;S36-p ENEDEGDSDGERKHQ 0.23918495849275 0.649270660293565 -0.319333333333333 0.0483333333333334 11.8760146067943 2.55857512156396 -0.319333333333333 0.0483333333333334 0.0649229939559367 0.554807710175528 -2.31036217915484 0.629152582663948 Q5TAP6 UTP14C Q5TAP6.S36.p_UTP14C Q5TAP6_S28sS36s_2_2_28_36 Q5TAP6 Q5TAP6 U3 small nucleolar RNA-associated protein 14 homolog C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12145.12145.3 7.46 7.46 3.752 3 2 2 0 891.3799 2512.184 S28s S36s TMT10 24 (K) NYPLsENEDEGDsDGERK (H) NY(0.0)PLS(0.99)ENEDEGDS(0.99)DGERK K:TMT10,s:Phosphorylated S UTP14C 87300.4 1 1 550.2 274.41 HUMAN 1 -11.876 2.5586 ENEDEQNSPPKKGKR-p Q9NTI5;S1283-p ENEDEQNSPPKKGKR 0.26464090195939 0.137696349220478 0.164333333333333 -0.158666666666667 10.952267337068 11.348069251884 0.164333333333333 -0.158666666666667 0.0803106731853292 0.0733150398238294 2.14774905192724 -2.21616847479256 Q9NTI5 PDS5B Q9NTI5.S1283.p_PDS5B Q9NTI5_S1283s _1_1_1283_1283 Q9NTI5 Q9NTI5|Q9NTI5-2|Q9NTI5-5 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13860.13860.5 23.5 23.5 99 1 1 1 0 656.562 3198.814 S1283s TMT10 1269 (K) RLKEDILENEDEQNsPPKK (G) RLKEDILENEDEQNS(1.0)PPKK K:TMT10,s:Phosphorylated S PDS5B 165919.5 19 11 100.1 597.99 HUMAN 1 10.9523 -11.3481 ENEEDEHSVNYKPPA-p J3QQX2;S24-p ENEEDEHSVNYKPPA 0.335167066678141 0.183060809148306 0.152666666666667 0.243333333333333 8.85367553185887 9.70124111517583 0.152666666666667 0.243333333333333 0.130206434567639 0.107121313306185 1.78303371370732 1.92909536374601 J3QQX2 ARHGDIA J3QQX2.S24.p_ARHGDIA J3QQX2_S24s _1_1_24_24 J3QQX2 J3QQX2|P52565|P52565-2|J3KRE2|J3KS60 Rho GDP-dissociation inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22776.22776.4 17.62 17.62 2.629 3 1 1 0 1037.0021 4065.0089 S24s Acetyl 2 (M) AEQEPTAEQLAQIAAENEEDEHsVNYKPPAQK (S) AEQEPT(0.0)AEQLAQIAAENEEDEHS(0.99)VNY(0.0)KPPAQK K:TMT10,s:Phosphorylated S ARHGDIA 25945 4 1 3480.1 49.97 HUMAN 1 8.8537 9.7012 ENEQEQQSDTEEGSN-p O14974;S871-p ENEQEQQSDTEEGSN 0.332748959652726 0.0699007719025612 -0.202666666666667 0.307 8.9224986306323 15.3668545617211 -0.202666666666667 0.307 0.128159303035354 0.0290612669517105 -1.79494693320568 2.94556238531191 O14974 PPP1R12A O14974.S871.p_PPP1R12A O14974_S862sS871s_2_2_862_871 O14974 O14974|O14974-2|O14974-3|O14974-4|O14974-5 Protein phosphatase 1 regulatory subunit 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19701.19701.4 19.51 19.51 2.464 8 2 2 0 1035.2087 3977.8728 S862s S871s TMT10 852 (R) STGVSFWTQDsDENEQEQQsDTEEGSNKK (E) S(0.0)T(0.0)GVS(0.0)FWT(0.0)QDS(0.99)DENEQEQQS(0.99)DT(0.0)EEGS(0.0)NKK K:TMT10,s:Phosphorylated S PPP1R12A 115678 9 17 286.1 385.3 HUMAN 1 -8.9225 15.3669 ENFARANSDIISLNF-p Q8TC76;S301-p ENFARANSDIISLNF 0.663480609588847 0.39774673343009 -0.0663333333333334 0.092 3.33359122729182 5.32273395701167 -0.0663333333333334 0.092 0.464131321367581 0.293580093391988 -0.787390927005141 1.16263760454587 Q8TC76 FAM110B Q8TC76.S301.p_FAM110B Q8TC76_S301s _1_1_301_301 Q8TC76 Q8TC76 Protein FAM110B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24144.24144.2 17.2 17.2 3.357 2 1 1 0 779.8941 1478.8165 S301s TMT10 299 (R) ANsDIISLNFR (S) ANS(0.99)DIIS(0.0)LNFR s:Phosphorylated S FAM110B 41012.4 4 5 1986.1 104.03 HUMAN 1 -3.3336 5.3227 ENFILKHTGPGILSM-p P62937;T93-p ENFILKHTGPGILSM 0.369805323847201 0.171858721268321 -0.163666666666667 0.154333333333333 8.01408151117533 10.0546479650713 -0.163666666666667 0.154333333333333 0.157976267621046 0.098749567795235 -1.63760329785737 1.99039644481294 P62937 PPIA P62937.T93.p_PPIA P62937_T93t _1_1_93_93 P62937 P62937|C9J5S7|F8WE65 Peptidyl-prolyl cis-trans isomerase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30990.30990.5 18.11 18.11 3.216 5 1 1 0 939.6751 4614.3728 T93t TMT10 83 (K) FEDENFILKHtGPGILSMANAGPNTNGSQFFICTAK (T) FEDENFILKHT(0.99)GPGILS(0.0)MANAGPNT(0.0)NGS(0.0)QFFICT(0.0)AK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T PPIA 18240.4 1 4 2402.1 85.13 HUMAN 1 -8.0141 10.0546 ENFKLRHSAPGLLSM-p O43447;S105-p ENFKLRHSAPGLLSM 0.885480474668744 0.261223101034105 0.029 -0.147333333333333 1.0435546174484 7.68205299512532 0.029 -0.147333333333333 0.786401871290571 0.170527608101729 0.284768242819383 -1.57947196969478 O43447 PPIH O43447.S105.p_PPIH O43447_S105s _1_1_105_105 O43447 O43447|O43447-2 Peptidyl-prolyl cis-trans isomerase H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23984.23984.4 14.78 14.78 2.343 7 1 1 0 919.9532 3596.8176 S105s TMT10 102 (K) LRHsAPGLLSMANSGPSTNGCQFFITCSK (C) LRHS(0.99)APGLLS(0.0)MANS(0.0)GPS(0.0)T(0.0)NGCQFFIT(0.0)CS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PPIH 19493.1 1 2 4891.1 25.4 HUMAN 1 1.0436 -7.6821 ENGAPECSPRNPLEP-p Q6IE81;S392-p ENGAPECSPRNPLEP 0.275691485746275 0.710239341293021 0.219333333333333 0.0426666666666667 10.5875368896523 2.04308172247428 0.219333333333333 0.0426666666666667 0.087346661637489 0.624729232076627 2.08399668397056 0.518261146180449 Q6IE81 JADE1 Q6IE81.S392.p_JADE1 Q6IE81_S392s _1_1_392_392 Q6IE81 Q6IE81|Q6IE81-2|Q6IE81-3 Protein Jade-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16855.16855.4 13.6 8.93 12.642 2 1 1 0 968.451 3790.8153 S392s TMT10 381 (K) GAAQENGAPECsPRNPLEPFASLEQNREEAHR (V) GAAQENGAPECS(0.99)PRNPLEPFAS(0.0)LEQNREEAHR C:Carbamidomethylation,s:Phosphorylated S JADE1 97129.2 1 2 1555.1 131.82 HUMAN 1 10.5875 2.0431 ENGDDSLSPRLGWPL-p Q9BVI0;S880-p ENGDDSLSPRLGWPL 0.134264480831341 0.49836421593337 0.454333333333333 0.074 17.9033713332677 4.04686751816047 0.454333333333333 0.074 0.0162055161011158 0.393834037885836 3.44273587864068 0.925919648919733 Q9BVI0 PHF20 Q9BVI0.S880.p_PHF20 Q9BVI0_S878sS880s_2_2_878_880 Q9BVI0 Q9BVI0 PHD finger protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19709.19709.3 9.79 9.79 9.786 3 2 2 0 890.0518 2508.2164 S878s S880s TMT10 861 (R) GSALDDAVNPLHENGDDsLsPR (L) GS(0.0)ALDDAVNPLHENGDDS(0.99)LS(0.99)PR s:Phosphorylated S PHF20 116810 1 7 1726.1 119.34 HUMAN 1 17.9034 4.0469 ENGERAGSPDVLRCS-p Q8NDX6;S44-p ENGERAGSPDVLRCS 0.264646088491939 0.00232985334139993 0.166333333333333 0.768666666666667 10.9498008963292 40.506224416553 0.166333333333333 0.766641607268462 0.0803562960937784 8.89974490054859e-05 2.14731717123612 10.3614181307502 Q8NDX6 ZNF740 Q8NDX6.S44.p_ZNF740 Q8NDX6_S44s_1_1_44_44 Q8NDX6 Q8NDX6 Zinc finger protein 740 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8080.8080.2 13.85 9.13 99 1 1 1 0 831.3688 1598.7881 Q35q S44s Hydrogen 35 (K) qAENGERAGsPDVLR (C) Q(1.0)AENGERAGS(1.0)PDVLR q:Pyroglutamic acid,s:Phosphorylated S ZNF740 22484.2 6 1 2891.1 66.71 HUMAN 1 10.9498 40.5062 ENGLAGLSASSIVEQ-p Q9BQI3;S334-p ENGLAGLSASSIVEQ 0.157126434170749 0.350470585251074 0.256666666666667 0.0973333333333334 16.1225005443982 6.03777570422408 0.256666666666667 0.0973333333333333 0.0244202409964942 0.24901323454698 3.09174713123603 1.29098130908509 Q9BQI3 EIF2AK1 Q9BQI3.S334.p_EIF2AK1 Q9BQI3_S334s_1_1_334_334 Q9BQI3 Q9BQI3|Q9BQI3-2 Eukaryotic translation initiation factor 2-alpha kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.31033.31033.4 8.58 8.58 1.227 6 1 1 0 966.7467 3782.9973 N328n S334s TMT10 315 (R) ESGELESTLELQEnGLAGLsASSIVEQQLPLRR (N) ES(0.0)GELES(0.0)T(0.0)LELQEN(1.0)GLAGLS(0.99)AS(0.0)S(0.0)IVEQQLPLRR n:Deamidated,s:Phosphorylated S EIF2AK1 71675.7 1 2 2626.1 76.5 HUMAN 1 16.1225 6.0378 ENGLRKHSPDLRVVQ-p Q8IWI9-4;S534-p ENGLRKHSPDLRVVQ 0.973184341125227 0.0663476458173452 -0.005 -0.325333333333333 0.229956535123005 15.671083809663 -0.00500000000000001 -0.325333333333333 0.948427955270021 0.0270951537061721 -0.0677364072595197 -3.00321844073878 Q8IWI9 MGA Q8IWI9.4.S534.p_MGA Q8IWI9-4_S534s _1_1_534_534 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4075.4075.3 8.87 3.78 99 1 1 1 0 464.2584 1310.7945 S534s TMT10 532 (R) KHsPDLR (V) KHS(1.0)PDLR K:TMT10,s:Phosphorylated S MGA 338321.5 4 3 141.1 523.06 HUMAN 1 -0.23 -15.6711 ENGNSFDSSGDELDV-p Q6ZN28;S115-p ENGNSFDSSGDELDV 0.809640283582017 0.050124945718593 0.0406666666666667 0.249 1.76293476543166 17.3724922726257 0.0406666666666667 0.249 0.666356323608885 0.0183126321928226 0.455637809736256 3.33375409592145 Q6ZN28 MACC1 Q6ZN28.S115.p_MACC1 Q6ZN28_S115sS116s_2_2_115_116 Q6ZN28 Q6ZN28 Metastasis-associated in colon cancer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25614.25614.3 24.07 24.07 5.415 3 2 2 0 955.0884 2703.3059 S115s S116s TMT10 106 (R) EIENGNSFDssGDELDVHQLLR (Q) EIENGNS(0.0)FDS(0.99)S(0.99)GDELDVHQLLR s:Phosphorylated S MACC1 97436.1 2 10 744.1 233.51 HUMAN 1 1.7629 17.3725 ENGRIHGSPLQKLVI-p O00566;S61-p ENGRIHGSPLQKLVI 0.149834443941158 0.00507942483656417 -0.414333333333333 -0.555 16.6197966923298 33.4213400301824 -0.414333333333333 -0.555 0.0217781172056619 0.000454847693715252 -3.18812104389468 -7.53073644465308 O00566 MPHOSPH10 O00566.S61.p_MPHOSPH10 O00566_S61s _1_1_61_61 O00566 O00566|U3KQ48 U3 small nucleolar ribonucleoprotein protein MPP10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9931.9931.3 9.61 9.61 99 1 1 1 0 473.2705 1337.8305 S61s TMT10 58 (R) IHGsPLQK (L) IHGS(1.0)PLQK K:TMT10,s:Phosphorylated S MPHOSPH10 78976.5 1 1 2195.1 93.81 HUMAN 1 -16.6198 -33.4213 ENHEESESLQEDMLG-p Q8IX12;S994-p ENHEESESLQEDMLG 0.461998274641388 0.443550150093231 0.106666666666667 0.127 6.18441181080526 4.70109566315476 0.106666666666667 0.127 0.24074585524859 0.338758681364642 1.31734925852119 1.04878482630447 Q8IX12 CCAR1 Q8IX12.S994.p_CCAR1 Q8IX12_S994s _1_1_994_994 Q8IX12 Q8IX12|Q8IX12-2 Cell division cycle and apoptosis regulator protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13790.13790.5 20.64 20.64 3.065 5 1 1 0 761.1684 3721.843 S994s TMT10 978 (R) KLTDTSKDEENHEESEsLQEDMLGNR (L) KLT(0.0)DT(0.0)S(0.0)KDEENHEES(0.0)ES(0.99)LQEDMLGNR K:TMT10,s:Phosphorylated S CCAR1 133503.3 3 8 1111.1 176.02 HUMAN 1 6.1844 4.7011 ENIGDGRSPEFRENE-p A0A087WUB9;S550-p ENIGDGRSPEFRENE 0.375099103740569 0.0232535679568597 -0.174 0.516 7.88297701263376 22.2927238829592 -0.174 0.516 0.162817956144079 0.00589831023750716 -1.61485349638502 4.38447451555978 A0A087WUB9 NotFound A0A087WUB9.S550.p_NotFound A0A087WUB9_S550s _1_1_550_550 A0A087WUB9 A0A087WUB9|Q8WYA6|Q8WYA6-4|Q8WYA6-2|Q8WYA6-3 Beta-catenin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9166.9166.5 14.26 14.26 7.966 2 1 1 0 613.3011 2982.507 S550s TMT10 540 (K) EYAENIGDGRsPEFRENEQKR (I) EY(0.0)AENIGDGRS(0.99)PEFRENEQKR K:TMT10,s:Phosphorylated S CTNNBL1 66158.3 5 2 2830.1 68.78 HUMAN 1 -7.883 22.2927 ENIKAYHSGEGHMPF-p Q9NZN5;S1308-p ENIKAYHSGEGHMPF 0.0622506947834567 0.206024376687448 -0.398666666666667 -0.202 26.2664834229884 9.0282133388772 -0.398666666666667 -0.202 0.0023623903378504 0.125077348500416 -5.37185660127246 -1.8125926777562 Q9NZN5 ARHGEF12 Q9NZN5.S1308.p_ARHGEF12 Q9NZN5_S1308s _1_1_1308_1308 Q9NZN5 Q9NZN5|Q9NZN5-2|E9PMR6 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7369.7369.3 13.47 13.47 13.473 2 1 1 0 566.5872 1617.7794 S1308s TMT10 1305 (K) AYHsGEGHMPFR (T) AY(0.0)HS(0.99)GEGHMPFR s:Phosphorylated S ARHGEF12 174199.1 1 11 251.1 406.16 HUMAN 1 -26.2665 -9.0282 ENIYIRHSNLMLEDL-p P11171;S664-p ENIYIRHSNLMLEDL 0.194002306690035 0.887609511665087 -0.288 -0.022 13.8906359903071 0.727731020470657 -0.288 -0.022 0.040825959552966 0.845720578033716 -2.67286095953383 -0.20409590647595 P11171 EPB41 P11171.S664.p_EPB41 P11171_S664s _1_1_664_664 P11171 P11171|P11171-2|P11171-7|P11171-3|Q4VB86|P11171-4 Protein 4.1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23849.23849.4 15.69 13.4 9.169 2 1 1 0 732.3746 2846.5123 S664s TMT10 654 (R) LDGENIYIRHsNLMLEDLDK (S) LDGENIY(0.0)IRHS(0.99)NLMLEDLDK K:TMT10,s:Phosphorylated S EPB41 97585.6 5 26 469.3 302.69 HUMAN 1 -13.8906 -0.7277 ENKESIPSLPQSPMR-p Q8NEZ4-3;S4320-p ENKESIPSLPQSPMR 0.313354135986383 0.0506845325810841 0.283666666666667 0.376333333333333 9.42399134254865 17.3014553762325 0.283666666666667 0.376333333333333 0.114182846572601 0.0186146323204489 1.88178695093348 3.31966104719254 Q8NEZ4 KMT2C Q8NEZ4.3.S4320.p_KMT2C Q8NEZ4-3_S4320sS4324s_2_2_4320_4324 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19426.19426.4 9.15 9.15 1.544 5 2 2 0 626.3087 2342.279 S4320s S4324s TMT10 4316 (K) ESIPsLPQsPMRETPSK (A) ES(0.0)IPS(0.99)LPQS(0.99)PMRET(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S KMT2C 554869.1 1 27 88.1 626.31 HUMAN 1 9.424 17.3015 ENKIVNVSLADLRGG-p Q9HAU0-6;S388-p ENKIVNVSLADLRGG 0.528368411677575 0.427028106063986 0.105333333333333 -0.197 5.12665074954918 4.91937835460504 0.105333333333333 -0.197 0.307138971081102 0.322152988530591 1.12721766664915 -1.08904573721625 Q9HAU0 PLEKHA5 Q9HAU0.6.S388.p_PLEKHA5 Q9HAU0-6_S388s _1_1_388_388 Q9HAU0-6 Q9HAU0-6|Q9HAU0-4|Q9HAU0-2|Q9HAU0-8|Q9HAU0-5|A0JP02|Q9HAU0-3 Isoform 6 of Pleckstrin homology domain-containing family A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26231.26231.2 12.89 3.73 99 1 1 1 0 704.8917 1328.8099 S388s TMT10 384 (K) IVNVsLADLR (G) IVNVS(1.0)LADLR s:Phosphorylated S PLEKHA5 147692.6 1 4 374.1 338.83 HUMAN 1 5.1267 -4.9194 ENKLSEASGGRAENG-p Q8WU90;S371-p ENKLSEASGGRAENG 0.72028620456719 0.00819640833915464 0.122333333333333 -0.484666666666667 2.69058695713092 29.6887405454898 0.122333333333333 -0.484666666666667 0.538197039262274 0.00107430091456326 0.656834494020571 -6.32808470181051 Q8WU90 ZC3H15 Q8WU90.S371.p_ZC3H15 Q8WU90_S371s _1_1_371_371 Q8WU90 Q8WU90 Zinc finger CCCH domain-containing protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13194.13194.4 7.33 7.33 1.326 7 1 1 0 740.6228 2879.499 S371s TMT10 355 (R) FSTYTSDKDENKLSEAsGGR (A) FS(0.0)T(0.0)Y(0.0)T(0.0)S(0.0)DKDENKLS(0.0)EAS(0.99)GGR K:TMT10,s:Phosphorylated S ZC3H15 49001 1 4 2779.1 70.93 HUMAN 1 2.6906 -29.6887 ENKPLGESFAEFRSA-p Q9UMZ2;S557-p ENKPLGESFAEFRSA 0.279768059006979 0.336036140909387 -0.319666666666667 -0.14 10.4520351684176 6.27573540117699 -0.319666666666667 -0.14 0.0901148746963133 0.235736298428077 -2.06036566837433 -1.3332075962938 Q9UMZ2 SYNRG Q9UMZ2.S557.p_SYNRG Q9UMZ2_S557s _1_1_557_557 Q9UMZ2 Q9UMZ2|Q9UMZ2-5|Q9UMZ2-7|Q9UMZ2-3|Q9UMZ2-8|Q9UMZ2-4|Q9UMZ2-9|Q9UMZ2-6 Synergin gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21231.21231.3 15.6 15.6 6.532 2 1 1 0 911.7884 2653.3874 S557s TMT10 544 (R) ELEQTAENKPLGEsFAEFR (S) ELEQT(0.0)AENKPLGES(0.99)FAEFR K:TMT10,s:Phosphorylated S SYNRG 141393.5 2 3 236.1 418.49 HUMAN 1 -10.452 -6.2757 ENKTKGDSIQNEKNP-p P38398;S561-p ENKTKGDSIQNEKNP 0.407878856431238 0.00825450899624557 0.138666666666667 -0.447333333333333 7.18923436492493 29.6421995638955 0.138666666666667 -0.447333333333333 0.191018998389997 0.00108587552279047 1.49409872993705 -6.31414485569687 P38398 BRCA1 P38398.S561.p_BRCA1 P38398_S561s _1_1_561_561 P38398 P38398-7|P38398-4|P38398-8|Q5YLB2 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17562.17562.4 9.28 9.28 1.484 3 1 1 0 810.1942 3157.7875 S561s TMT10 557 (K) TKGDsIQNEKNPNPIESLEK (E) T(0.0)KGDS(0.99)IQNEKNPNPIES(0.0)LEK K:TMT10,s:Phosphorylated S BRCA1 210227.6 2 7 106.1 588.91 HUMAN 1 7.1892 -29.6422 ENLDQAFSVAERDLG-p Q15149;S361-p ENLDQAFSVAERDLG 0.358516264962328 0.715969023615155 0.139333333333333 0.042 8.27711143142253 1.99567064629384 0.139333333333333 0.0420000000000001 0.148692429282657 0.631586640874379 1.68320102513756 0.507784151387732 Q15149 PLEC Q15149.S361.p_PLEC Q15149_S361s _1_1_361_361 Q15149 Q15149|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32445.32445.3 15.03 9.86 5.152 3 1 1 0 929.1281 2705.4056 S361s TMT10 350 (R) QTNLENLDQAFsVAERDLGVTR (L) QT(0.0)NLENLDQAFS(0.99)VAERDLGVT(0.0)R s:Phosphorylated S PLEC 533778 1 4 44.1 794.85 HUMAN 1 8.2771 1.9957 ENLEELQSLRELDLY-p Q15435;S121-p ENLEELQSLRELDLY 0.724309472221847 0.0584443362483647 0.0573333333333333 0.230666666666667 2.65153865295651 16.4281022583948 0.0573333333333333 0.230666666666667 0.543057898544055 0.022760917999592 0.648701455112507 3.14852916225163 Q15435 PPP1R7 Q15435.S121.p_PPP1R7 Q15435_S121s _1_1_121_121 Q15435 Q15435|Q15435-2|Q15435-3|B5MBZ8 Protein phosphatase 1 regulatory subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29525.29525.4 18.38 13.43 5.537 2 1 1 0 819.166 3193.6815 S121s TMT10 112 (K) CIENLEELQsLRELDLYDNQIK (K) CIENLEELQS(0.99)LRELDLY(0.0)DNQIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PPP1R7 41677.6 1 4 1222.1 164.72 HUMAN 1 2.6515 16.4281 ENLELNGSILSGGYP-p O43663;S554-p ENLELNGSILSGGYP 0.827667967079188 0.023345939998049 0.0443333333333333 -0.370333333333333 1.58098698906314 22.2626993662758 0.0443333333333333 -0.370333333333333 0.694866382481262 0.00593922889875042 0.4138704843456 -4.37756128841912 O43663 PRC1 O43663.S554.p_PRC1 O43663_S554s _1_1_554_554 O43663 O43663|O43663-4|O43663-2 Protein regulator of cytokinesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25498.25498.3 23.69 23.69 2.396 4 1 1 0 861.1028 2501.3197 S554s TMT10 547 (K) ENLELNGsILSGGYPGSAPLQR (N) ENLELNGS(0.99)ILS(0.0)GGY(0.0)PGS(0.0)APLQR s:Phosphorylated S PRC1 72290 1 7 715.1 238.03 HUMAN 1 1.581 -22.2627 ENLILENTQLLETKN-p O60271;T418-p ENLILENTQLLETKN 0.82619699417303 0.0294171332468352 0.0383333333333333 -0.343666666666667 1.60169211173576 20.7284589374349 0.0383333333333333 -0.343666666666667 0.691561470078781 0.00845578839468521 0.418668447205803 -4.03310838549476 O60271 SPAG9 O60271.T418.p_SPAG9 O60271_T418t _1_1_418_418 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-9|O60271-3|O60271-5 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30210.30210.3 17.26 11.95 6.397 2 1 1 0 808.7736 2344.3376 T418t TMT10 409 (R) EVENLILENtQLLETK (N) EVENLILENT(0.99)QLLET(0.0)K K:TMT10,t:Phosphorylated T SPAG9 147001.6 1 28 84.1 629.25 HUMAN 1 1.6017 -20.7285 ENLILGFSIGGGIDQ-p O14907;S32-p ENLILGFSIGGGIDQ 0.60815172428745 0.340702917339916 -0.088 0.123333333333333 4.00015600440689 6.19472077075229 -0.0880000000000001 0.123333333333333 0.398092870266446 0.24017506832664 -0.917159432091882 1.31885491704981 O14907 TAX1BP3 O14907.S32.p_TAX1BP3 O14907_S32s _1_1_32_32 O14907 O14907|A0A087X282 Tax1-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31404.31404.4 23.43 20.31 8.619 4 1 1 0 1019.2607 3994.0649 S32s TMT10 23 (R) QGENLILGFsIGGGIDQDPSQNPFSEDKTDK (G) QGENLILGFS(0.99)IGGGIDQDPS(0.0)QNPFS(0.0)EDKT(0.0)DK K:TMT10,s:Phosphorylated S TAX1BP3 13734.5 4 1 2411.1 84.6 HUMAN 1 -4.0002 6.1947 ENLKNSLSPATQRKM-p P29536;S555-p ENLKNSLSPATQRKM 0.297363648018023 0.0205088558078449 0.190333333333333 0.493666666666667 9.90605008279486 23.1048808400073 0.190333333333333 0.493666666666667 0.102186845264404 0.00489228688212438 1.96539267164548 4.5741118272313 P29536 LMOD1 P29536.S555.p_LMOD1 P29536_S555s _1_1_555_555 P29536 P29536|P29536-2|Q9BV00 Leiomodin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6006.6006.2 13.62 7.87 1.298 3 1 1 0 641.8215 1202.6691 S555s TMT10 552 (K) NSLsPATQR (K) NS(0.0)LS(0.99)PAT(0.0)QR s:Phosphorylated S LMOD1 67200.1 2 5 2749.1 71.87 HUMAN 1 9.9061 23.1049 ENLLKRRSFPLFDNS-p Q5T0W9;S664-p ENLLKRRSFPLFDNS 0.41344974098146 0.129567885877395 0.184666666666667 -0.220666666666667 7.07375592912791 11.6976765920051 0.184666666666667 -0.220666666666667 0.196166302887906 0.0676444766045993 1.47391772295643 -2.27771983955042 Q5T0W9 FAM83B Q5T0W9.S664.p_FAM83B Q5T0W9_S664s _1_1_664_664 Q5T0W9 Q5T0W9 Protein FAM83B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22648.22648.2 11.37 11.37 11.371 2 1 1 0 682.328 1283.6833 S664s Hydrogen 664 (R) sFPLFDNSK (A) S(0.99)FPLFDNS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S FAM83B 115253.5 2 8 249.1 407.75 HUMAN 1 7.0738 -11.6977 ENLLRTPTPPEVTKI-p Q8IX90;T360-p ENLLRTPTPPEVTKI 0.236230693174061 0.00295295766305267 -0.295333333333333 -0.894 12.0073108793686 38.1308738188034 -0.295333333333333 -0.894 0.0629896089322313 0.000153784518823854 -2.33363138857266 -9.32162046210032 Q8IX90 SKA3 Q8IX90.T360.p_SKA3 Q8IX90_T360t _1_1_360_360 Q8IX90 Q8IX90 Spindle and kinetochore-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.37071.37071.4 20.51 20.51 1.231 4 1 1 0 747.4332 2906.7421 T360t TMT10 358 (R) TPtPPEVTKIPEDILQLLSK (Y) T(0.0)PT(0.99)PPEVT(0.0)KIPEDILQLLS(0.0)K K:TMT10,t:Phosphorylated T SKA3 46872 4 9 966.1 193.88 HUMAN 1 -12.0073 -38.1309 ENLSSRVSWQDLKDF-p Q13243;S120-p ENLSSRVSWQDLKDF 0.672055923167882 0.0432362765105269 0.0573333333333333 0.262333333333333 3.23284269488526 18.276445538699 0.0573333333333333 0.262333333333333 0.475024194847459 0.014871522966395 0.767321190066665 3.51549623136298 Q13243 SRSF5 Q13243.S120.p_SRSF5 Q13243_S120s _1_1_120_120 Q13243 Q13243|Q13243-3 Serine/arginine-rich splicing factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27791.27791.3 14.81 8.72 1.319 3 1 1 0 809.1122 2345.3593 S120s TMT10 110 (R) LIVENLSSRVsWQDLK (D) LIVENLS(0.0)S(0.0)RVS(0.99)WQDLK K:TMT10,s:Phosphorylated S SRSF5 31377.4 2 9 743.3 233.79 HUMAN 1 3.2328 18.2764 ENLTQVGSILGNLKD-p O00161;S161-p ENLTQVGSILGNLKD 0.443421308607787 0.215814877971722 -0.103666666666667 -0.153333333333333 6.51008562248188 8.76414331860426 -0.103666666666667 -0.153333333333333 0.223352818770691 0.132918572402682 -1.37495322135772 -1.76691835492999 O00161 SNAP23 O00161.S161.p_SNAP23 O00161_S161s _1_1_161_161 O00161 O00161 Synaptosomal-associated protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28378.28378.4 23.36 23.36 6.49 3 1 1 0 871.6945 3403.7892 S161s TMT10 142 (K) RITNDAREDEMEENLTQVGsILGNLK (D) RIT(0.0)NDAREDEMEENLT(0.0)QVGS(0.99)ILGNLK K:TMT10,s:Phosphorylated S SNAP23 23696 4 8 1061.1 182.1 HUMAN 1 -6.5101 -8.7641 ENLVNDVSDEAWNER-p Q9BTT6;S443-p ENLVNDVSDEAWNER 0.800379409372004 0.393856384094084 0.048 0.102666666666667 1.86203787657994 5.37964678427257 0.048 0.102666666666667 0.651322696708631 0.289757924092356 0.478027838212015 1.17294514739351 Q9BTT6 LRRC1 Q9BTT6.S443.p_LRRC1 Q9BTT6_S443s _1_1_443_443 Q9BTT6 Q9BTT6 Leucine-rich repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25672.25672.3 24.54 19.75 99 1 1 1 0 834.0394 2420.135 S443s TMT10 432 (R) CGALENLVNDVsDEAWNER (A) CGALENLVNDVS(1.0)DEAWNER C:Carbamidomethylation,s:Phosphorylated S LRRC1 59982.4 2 55 22.3 1004.81 HUMAN 1 1.862 5.3796 ENMEKRRSRESLNVD-p Q07866-3;S521-p ENMEKRRSRESLNVD 0.321266030442159 0.325285060220177 0.235 -0.104 9.23268225635459 6.45391182238536 0.235 -0.104 0.119325091033901 0.226260539203464 1.8486490199549 -1.36469426893151 Q07866 KLC1 Q07866.3.S521.p_KLC1 Q07866-3_S521s _1_1_521_521 Q07866-3 Q07866-3 Isoform G of Kinesin light chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14633.14633.3 18.35 18.35 2.621 5 1 1 0 1011.1432 2951.4544 S521s Hydrogen 521 (R) sRESLNVDVVKYESGPDGGEEGVSGR (A) S(0.99)RES(0.0)LNVDVVKY(0.0)ES(0.0)GPDGGEEGVS(0.0)GR K:TMT10-Lys-Only,s:Phosphorylated S KLC1 64831.8 2 3 1242.4 162.93 HUMAN 1 9.2327 -6.4539 ENMGRFGSGMNMGRI-p P52272;S365-p ENMGRFGSGMNMGRI 0.295665949140035 0.392473557872435 0.242 0.0873333333333333 9.96415344891971 5.40050650366557 0.242 0.0873333333333333 0.100828813136878 0.288369516743515 1.97548334183288 1.17671868440018 P52272 HNRNPM P52272.S365.p_HNRNPM P52272_S365s _1_1_365_365 P52272 P52272|A0A087X0X3|P52272-2 Heterogeneous nuclear ribonucleoprotein M HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14769.14769.2 11.07 11.07 99 1 1 1 0 633.2719 1185.5706 S365s TMT10 363 (R) FGsGMNMGR (I) FGS(1.0)GMNMGR s:Phosphorylated S HNRNPM 77799.7 1 3 830.1 216.57 HUMAN 1 9.9642 5.4005 ENNAKESSPEKEAEE-p O43719;S453-p ENNAKESSPEKEAEE 0.709808893232867 0.00609801306239028 -0.091 0.626166666666667 2.79838869578258 31.9483671032154 -0.0910000000000001 0.626166666666667 0.525002208605785 0.000638503510964832 -0.679156594136691 7.03541438105468 O43719 HTATSF1 O43719.S453.p_HTATSF1 O43719_S452sS453s_2_2_452_453 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13509.13509.4 11.21 11.21 2.359 5 2 2 0 1423.8868 5532.6039 S452s S453s TMT10 434 (K) TEDGGEFEEGASENNAKEssPEKEAEEGCPEKESEEGCPK (R) T(0.0)EDGGEFEEGAS(0.0)ENNAKES(0.99)S(0.99)PEKEAEEGCPEKES(0.0)EEGCPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S HTATSF1 86421.8 6 17 149.1 512 HUMAN 2 -2.7984 31.9484 ENNKAQASPSEENKA-p Q5T2D3;S326-p ENNKAQASPSEENKA 0.105172918990389 0.00626582857597616 0.299333333333333 -0.483333333333333 20.5872545078977 31.7392565513902 0.299333333333333 -0.483333333333333 0.00873523411721109 0.000669999293676187 4.00613039930154 -6.96735800559072 Q5T2D3 OTUD3 Q5T2D3.S326.p_OTUD3 Q5T2D3_S326s _1_1_326_326 Q5T2D3 Q5T2D3 OTU domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5523.5523.2 13.62 13.62 1.459 2 1 1 0 799.8947 1518.8164 S326s TMT10 323 (K) AQAsPSEENK (A) AQAS(0.99)PS(0.0)EENK K:TMT10,s:Phosphorylated S OTUD3 45408.6 2 3 3435.1 51.19 HUMAN 1 20.5873 -31.7393 ENNRFGGSGSQVDSA-p Q13200;S361-p ENNRFGGSGSQVDSA 0.187254795627764 0.0189905361404552 0.295 -0.415333333333333 14.296323099978 23.673986419232 0.295 -0.415333333333333 0.037184991795625 0.00429142333191856 2.747488055702 -4.71011269777507 Q13200 PSMD2 Q13200.S361.p_PSMD2 Q13200_S361s _1_1_361_361 Q13200 Q13200|Q13200-3|Q13200-2 26S proteasome non-ATPase regulatory subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21350.21350.5 18.55 18.55 1.12 5 1 1 0 917.8668 4505.3338 S361s TMT10 336 (R) ELDIMEPKVPDDIYKTHLENNRFGGsGSQVDSAR (M) ELDIMEPKVPDDIY(0.0)KT(0.0)HLENNRFGGS(0.99)GS(0.0)QVDS(0.0)AR K:TMT10,s:Phosphorylated S PSMD2 100939.6 5 6 539.1 277.07 HUMAN 1 14.2963 -23.674 ENPCHAGSCQPCPRV-p Q6ZNB6;S331-p ENPCHAGSCQPCPRV 0.958594669389891 0.268860681033287 0.0103333333333333 0.164 0.356933568855179 7.51308554655204 0.0103333333333333 0.164 0.921099704791584 0.177292941422202 0.103756446997872 1.55010016087275 Q6ZNB6 NFXL1 Q6ZNB6.S331.p_NFXL1 Q6ZNB6_S331s _1_1_331_331 Q6ZNB6 Q6ZNB6|Q6ZNB6-2 NF-X1-type zinc finger protein NFXL1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4801.4801.3 18.05 18.05 99 1 1 1 0 713.6132 2058.8564 S331s TMT10 323 (K) CENPCHAGsCQPCPR (V) CENPCHAGS(1.0)CQPCPR C:Carbamidomethylation,s:Phosphorylated S NFXL1 107784.8 1 3 2273.1 90.3 HUMAN 1 0.3569 7.5131 ENPLDDNSEEEMEDA-p Q5F1R6-3;S370-p ENPLDDNSEEEMEDA 0.602386209275245 0.259071087958793 -0.076 0.125333333333333 4.06400552653045 7.72737094777153 -0.076 0.125333333333333 0.392282963347103 0.168757430899771 -0.929344703464422 1.58734289783367 Q5F1R6 DNAJC21 Q5F1R6.3.S370.p_DNAJC21 Q5F1R6-3_S370s _1_1_370_370 Q5F1R6-3 Q5F1R6-2|Q5F1R6-3 Isoform 3 of DnaJ homolog subfamily C member 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22546.22546.4 26.23 24.33 14.18 2 1 1 0 1118.7472 4391.9986 S370s TMT10 347 (K) QQLEEEEENFSRPQIDENPLDDNsEEEMEDAPK (Q) Q(0.0)QLEEEEEN(0.0)FS(0.0)RPQIDEN(0.0)PLDDN(0.0)S(0.99)EEEM(0.0)EDAPK K:TMT10,s:Phosphorylated S DNAJC21 64139.2 10 3 1325.1 153.94 HUMAN 1 -4.064 7.7274 ENPNMRLSQLKQLLK-p Q96CT7;S194-p ENPNMRLSQLKQLLK 0.0350618685416583 0.746799966728225 -0.826333333333333 0.0423333333333334 33.8798308346492 1.75018016846829 -0.826333333333334 0.0423333333333334 0.000409276601464099 0.668316191680478 -7.70511586862978 0.452688039095476 Q96CT7 CCDC124 Q96CT7.S194.p_CCDC124 Q96CT7_S194s _1_1_194_194 Q96CT7 Q96CT7 Coiled-coil domain-containing protein 124 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15908.15908.3 11.82 11.82 99 1 1 1 0 666.0191 1916.0788 S194s TMT10 186 (K) QENPNMRLsQLK (Q) QENPNMRLS(1.0)QLK K:TMT10,s:Phosphorylated S CCDC124 25834.8 1 3 4674.1 28.12 HUMAN 1 -33.8798 1.7502 ENPPVEDSSDEDDKR-p Q8TCJ2;S498-p ENPPVEDSSDEDDKR 0.994167574639875 0.215729083427818 0.00399999999999998 -0.437 0.0502555344955314 8.76623976148197 0.00399999999999999 -0.437 0.98849493090046 0.132854424926749 0.0150981365654852 -1.76728096315232 Q8TCJ2 STT3B Q8TCJ2.S498.p_STT3B Q8TCJ2_S498s _1_1_498_498 Q8TCJ2 Q8TCJ2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11142.11142.4 18.91 15.87 1.141 3 1 1 0 858.6619 3351.6544 S498s TMT10 491 (R) ENPPVEDsSDEDDKRNQGNLYDK (A) ENPPVEDS(0.99)S(0.0)DEDDKRNQGNLY(0.0)DK K:TMT10,s:Phosphorylated S STT3B 94300.1 2 5 3653.1 46.06 HUMAN 1 0.0503 -8.7662 ENPSQPASPRVTKCK-p O15018;S1270-p ENPSQPASPRVTKCK 0.553432266934303 0.0553363567435284 -0.0906666666666667 -0.256333333333333 4.74295695672683 16.7488245371647 -0.0906666666666667 -0.256333333333333 0.335509100239924 0.0211406115487782 -1.05673591540595 -3.21092438269155 O15018 PDZD2 O15018.S1270.p_PDZD2 O15018_S1270s _1_1_1270_1270 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7295.7295.4 19.19 19.19 4.598 6 1 1 0 630.557 2439.2425 S1270s TMT10 1252 (K) TSVDTGQVSRPENPSQPAsPR (V) T(0.0)S(0.0)VDT(0.0)GQVS(0.0)RPENPS(0.0)QPAS(0.99)PR s:Phosphorylated S PDZD2 304146 3 19 85.1 628.64 HUMAN 1 -4.743 -16.7488 ENPTPPFTPKMGRRS-p O15085-2;T712-p ENPTPPFTPKMGRRS 0.270485509272179 0.807171853699684 0.178666666666667 -0.0356666666666666 10.761982639398 1.30144493264052 0.178666666666667 -0.0356666666666667 0.0839076844051303 0.741063642451568 2.11446098794085 -0.347836558672517 O15085 ARHGEF11 O15085.2.T712.p_ARHGEF11 O15085-2_T708tT712t_2_2_708_712 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20150.20150.3 11.49 11.49 5.442 3 2 2 0 649.3211 1786.0151 T708t T712t TMT10 703 (R) SLENPtPPFtPK (M) S(0.0)LENPT(0.99)PPFT(0.99)PK K:TMT10,t:Phosphorylated T ARHGEF11 173153.4 4 25 228.1 424.05 HUMAN 1 10.762 -1.3014 ENQERNDSPVPTHDE-p Q8NEV8;S948-p ENQERNDSPVPTHDE 0.557070175925514 0.00526062627901912 -0.112333333333333 -0.531666666666667 4.69279604711052 33.1319984495815 -0.112333333333333 -0.531666666666667 0.339406687579118 0.000486183432031001 -1.04744818383551 -7.43118728290783 Q8NEV8 EXPH5 Q8NEV8.S948.p_EXPH5 Q8NEV8_S948s _1_1_948_948 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13817.13817.5 21.29 21.29 1.319 4 1 1 0 752.3723 3677.856 S948s TMT10 933 (K) NQFIVSHSENQERNDsPVPTHDEVVDVK (C) NQFIVS(0.0)HS(0.0)ENQERNDS(0.99)PVPT(0.0)HDEVVDVK K:TMT10,s:Phosphorylated S EXPH5 223884.5 2 13 129.1 537.25 HUMAN 1 -4.6928 -33.132 ENQGDNSSENGNGKE-p Q17RY0;S124-p ENQGDNSSENGNGKE 0.0622808715508477 0.0535838480226852 0.818333333333333 -0.381 26.23655485569 16.9433899583362 0.818333333333333 -0.381 0.00237872651978552 0.0202144069330331 5.36393102113691 -3.24902784212498 Q17RY0 CPEB4 Q17RY0.S124.p_CPEB4 Q17RY0_S124s_1_1_124_124 Q17RY0 Q17RY0|Q17RY0-2|B7ZLQ8|E5RJM0 Cytoplasmic polyadenylation element-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4873.4873.3 16.26 16.26 1.107 3 1 1 0 878.4156 2552.2792 S124s N126n TMT10 113 (K) AKSEENQGDNSsEnGNGK (E) AKS(0.0)EEN(0.0)QGDN(0.0)S(0.0)S(0.99)EN(0.99)GN(0.0)GK K:TMT10,s:Phosphorylated S,n:Deamidated CPEB4 80778.1 11 2 1827.1 112.47 HUMAN 1 26.2366 -16.9434 ENRDIEISTEEEKDT-p Q4G0J3-3;S344-p ENRDIEISTEEEKDT 0.347574855103594 0.0275768935924478 -0.240666666666667 0.432666666666667 8.52725318734744 21.1469932417505 -0.240666666666667 0.432666666666667 0.140370123258767 0.00767892941974566 -1.72652555721612 4.12540042468875 Q4G0J3 LARP7 Q4G0J3.3.S344.p_LARP7 Q4G0J3-3_S344s _1_1_344_344 Q4G0J3-3 Q4G0J3-3 Isoform 3 of La-related protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10428.10717.3 15.17 15.17 1.163 2 1 1 0 710.684 2050.0705 S344s TMT10 337 (K) ENRDIEIsTEEEK (D) ENRDIEIS(0.99)T(0.0)EEEK K:TMT10,s:Phosphorylated S LARP7 67937.6 7 4 784.1 225.55 HUMAN 1 -8.5273 21.147 ENRFGLGTPEKNTKA-p Q5VZK9;T1228-p ENRFGLGTPEKNTKA 0.177205134669313 0.00360332108061802 -0.393 -1.31533333333333 14.893459540378 36.3594677987255 -0.393 -1.31533333333333 0.0324081354982384 0.000231234813690842 -2.85849320221247 -8.60840828457903 Q5VZK9 LRRC16A Q5VZK9.T1228.p_LRRC16A Q5VZK9_T1228t _1_1_1228_1228 Q5VZK9 Q5VZK9|Q5VZK9-2 F-actin-uncapping protein LRRC16A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18686.18686.3 10.09 10.09 99 1 1 1 0 462.9191 1306.7771 T1228t TMT10 1224 (R) FGLGtPEK (N) FGLGT(1.0)PEK K:TMT10,t:Phosphorylated T CARMIL1 152809.3 3 10 280.1 388.82 HUMAN 1 -14.8935 -36.3595 ENRGEPPTPPSPAPA-p I3L2J0;T2198-p ENRGEPPTPPSPAPA 0.667168274590685 0.257093332768183 0.0916666666666667 0.111 3.28565044875837 7.77102894670762 0.0916666666666667 0.111 0.469283143878201 0.167069474017861 0.777857264393318 1.59492303854398 I3L2J0 NotFound I3L2J0.T2198.p_NotFound I3L2J0_T2198tS2201s_2_2_2198_2201 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16134.16134.4 16.28 15.3 9.268 7 2 2 0 946.6963 3623.8251 T2198t S2201s TMT10 2185 (R) VPGQGLENRGEPPtPPsPAPAPAVAPGGSSESSSGR (A) VPGQGLENRGEPPT(0.99)PPS(0.99)PAPAPAVAPGGS(0.0)S(0.0)ES(0.0)S(0.0)S(0.0)GR t:Phosphorylated T,s:Phosphorylated S CIC 259056.7 5 50 23.1 999.57 HUMAN 1 3.2857 7.771 ENRGRLGSQDLLNWC-p P04626;S819-p ENRGRLGSQDLLNWC 0.839613802180868 0.905004408230415 -0.0286666666666667 0.013 1.46612074251032 0.604918239207463 -0.0286666666666667 0.013 0.713490057762054 0.869977811216212 -0.387032554164618 0.171595893985565 P04626 ERBB2 P04626.S819.p_ERBB2 P04626_S819s _1_1_819_819 P04626 P04626|P04626-4|P04626-5|J3QLU9|B4DTR1|P04626-2|P04626-3 Receptor tyrosine-protein kinase erbB-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32847.32847.3 18.47 14.47 99 1 1 1 0 772.3946 2235.203 S819s TMT10 817 (R) LGsQDLLNWCMQIAK (G) LGS(1.0)QDLLNWCMQIAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ERBB2 141274.2 1 14 521.1 283.33 HUMAN 1 -1.4661 0.6049 ENRIRTLSLEPEESL-p P57768;S276-p ENRIRTLSLEPEESL 0.182372527376184 0.0849603662730739 -0.326 0.227333333333333 14.5362299759222 14.1709141635967 -0.326 0.227333333333333 0.0351865755658991 0.0382744169506024 -2.79191478411923 2.7226953968619 P57768 SNX16 P57768.S276.p_SNX16 P57768_S276s _1_1_276_276 P57768 P57768|A0A0C4DGW2|P57768-2 Sorting nexin-16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28523.28523.3 13.88 9.64 1.415 5 1 1 0 919.1152 2675.3712 S276s Hydrogen 274 (R) TLsLEPEESLDVSETEGEQILK (V) T(0.0)LS(0.99)LEPEES(0.0)LDVS(0.0)ET(0.0)EGEQILK K:TMT10-Lys-Only,s:Phosphorylated S SNX16 39451.1 1 5 1686.1 120.98 HUMAN 1 -14.5362 14.1709 ENRKSWAS_______-p Q9NQT8;S1826-p ENRKSWAS_______ 0.224392356720474 0.000952253650599092 0.670666666666667 -1.37266666666667 12.4687944950441 55.5804957761696 0.670666666666667 -1.37266666666667 0.0566396486295937 2.76662579856299e-06 2.41577247245807 -19.9599196714631 Q9NQT8 KIF13B Q9NQT8.S1826.p_KIF13B Q9NQT8_S1826s _1_1_1826_1826 Q9NQT8 Q9NQT8|Q9NQT8-2 Kinesin-like protein KIF13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7397.7397.2 8.9 8.9 3.275 2 1 1 0 863.9376 1646.9015 S1826s TMT10 1817 (K) NPENRKSWAs (-) NPENRKS(0.0)WAS(0.99) K:TMT10,s:Phosphorylated S KIF13B 204097.3 2 17 335.1 355.82 HUMAN 1 12.4688 -55.5805 ENRNTCFSPDHKQPQ-p Q96AY4;S2079-p ENRNTCFSPDHKQPQ 0.238898769658179 0.0239577370368854 0.171666666666667 -0.380666666666667 11.8916571805653 22.0917849459487 0.171666666666667 -0.380666666666667 0.0646895726223794 0.0061776244821067 2.31313223215327 -4.33833744010075 Q96AY4 TTC28 Q96AY4.S2079.p_TTC28 Q96AY4_S2079s _1_1_2079_2079 Q96AY4 Q96AY4|A0A087WW06 Tetratricopeptide repeat protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8443.8443.3 13.56 11.1 2.108 3 1 1 0 908.7645 2644.3124 S2079s TMT10 2075 (R) NTCFsPDHKQPQPGTAGGMR (V) NT(0.0)CFS(0.99)PDHKQPQPGT(0.0)AGGMR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TTC28 272819.5 2 3 1011.1 188.93 HUMAN 1 11.8917 -22.0918 ENRPFSPSPLNNISS-p Q5UIP0;S1238-p ENRPFSPSPLNNISS 0.358074760080016 0.0367438892741024 0.191666666666667 0.275666666666667 8.29167750821416 19.3024590613988 0.191666666666667 0.275666666666667 0.148194555748828 0.0117423249297029 1.68572473037177 3.72749017354785 Q5UIP0 RIF1 Q5UIP0.S1238.p_RIF1 Q5UIP0_S1238s _1_1_1238_1238 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25058.25058.3 18.95 15.53 1.62 7 1 1 0 1044.535 3051.6151 S1238s TMT10 1227 (K) FDGSENRPFSPsPLNNISSTVTVK (N) FDGS(0.0)ENRPFS(0.0)PS(0.99)PLNNIS(0.0)S(0.0)T(0.0)VT(0.0)VK K:TMT10,s:Phosphorylated S RIF1 276628.8 9 11 29.1 922.06 HUMAN 1 8.2917 19.3025 ENRTLRKSLDTLQNV-p Q9P219;S681-p ENRTLRKSLDTLQNV 0.282040540734949 0.301169755157944 0.390666666666667 -0.0996666666666666 10.3933134622961 6.88141042196929 0.390666666666667 -0.0996666666666667 0.0913416082115559 0.205049614814764 2.05013304908998 -1.43984728734347 Q9P219 CCDC88C Q9P219.S681.p_CCDC88C Q9P219_S681s _1_1_681_681 Q9P219 Q9P219 Protein Daple HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31590.31590.3 12.01 12.01 1.224 3 1 1 0 742.0509 2144.176 S681s TMT10 681 (K) sLDTLQNVSLQLEGLER (D) S(0.99)LDT(0.0)LQNVS(0.0)LQLEGLER s:Phosphorylated S CCDC88C 229367.3 2 4 742.1 234.08 HUMAN 1 10.3933 -6.8814 ENRVHDRSEEEEEEE-p Q5TAQ9;S99-p ENRVHDRSEEEEEEE 0.835722785685359 0.0358943447129582 0.0366666666666667 0.398666666666667 1.5061165624484 19.4511476321555 0.0366666666666666 0.398666666666667 0.706949422028864 0.0113471092634048 0.396420390375686 3.75874357767164 Q5TAQ9 DCAF8 Q5TAQ9.S99.p_DCAF8 Q5TAQ9_S99s _1_1_99_99 Q5TAQ9 Q5TAQ9|V9GY54|Q5TAQ9-2 DDB1- and CUL4-associated factor 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5453.5453.3 17.2 17.2 99 1 1 1 0 994.4061 2901.2343 S99s TMT10 95 (R) VHDRsEEEEEEEEEEEEEQPR (R) VHDRS(1.0)EEEEEEEEEEEEEQPR s:Phosphorylated S DCAF8 67535.7 2 1 1532.1 133.65 HUMAN 1 1.5061 19.4511 ENSGDYISENEDPEL-p Q99996-6;S1247-p ENSGDYISENEDPEL 0.313441058925988 0.00367938515130365 -0.409333333333333 0.625 9.42229088598903 36.141099479624 -0.409333333333333 0.625 0.114227563002405 0.000243158833920271 -1.88149232245753 8.52393148203476 Q99996 AKAP9 Q99996.6.S1247.p_AKAP9 Q99996-6_S1247s_1_1_1247_1247 Q99996-6 Q99996-6|A0A0A0MRF6|Q99996-2|Q99996-3|Q99996-5|A0A0A0MRE9|Q99996-4|A0A087WX84 Isoform 6 of A-kinase anchor protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.29597.29597.5 18.73 18.73 2.083 6 1 1 0 1196.1494 5895.7481 S1247s N1249n TMT10 1232 (K) CEVNAEDKENSGDYIsEnEDPELQDYRYEVQDFQENMHTLLNK (V) CEVN(0.0)AEDKEN(0.0)S(0.0)GDY(0.0)IS(0.99)EN(0.99)EDPELQDY(0.0)RY(0.0)EVQDFQEN(0.0)MHT(0.0)LLN(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated AKAP9 457697.2 2 2 1721.1 119.49 HUMAN 1 -9.4223 36.1411 ENSKEYLSENEPWVD-p A0A0G2JPT5;S86-p ENSKEYLSENEPWVD 0.237800187730078 0.0161548134514483 -0.459 0.409333333333333 11.9562146081607 24.7398521205595 -0.459 0.409333333333333 0.0637350805743734 0.00335749046471067 -2.32457068534021 4.97206787116868 A0A0G2JPT5 NotFound A0A0G2JPT5.S86.p_NotFound A0A0G2JPT5_S86s _1_1_86_86 A0A0G2JPT5 O75943|A0A0G2JPT5|O75943-2 Cell cycle checkpoint protein RAD17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22520.22520.3 12.83 12.83 7.835 2 1 1 0 682.9998 1967.0162 S86s TMT10 83 (K) EYLsENEPWVDK (Y) EY(0.0)LS(0.99)ENEPWVDK K:TMT10,s:Phosphorylated S RAD17 77724 1 1 4686.1 27.97 HUMAN 1 -11.9562 24.7399 ENSLRRPSAAHNGQK-p Q9UK96;S922-p ENSLRRPSAAHNGQK 0.626039464597712 0.8033181617083 -0.0743333333333333 -0.03 3.77773763221673 1.3314914951457 -0.0743333333333334 -0.03 0.419011783845793 0.735954305707541 -0.874398175081604 -0.355043487996093 Q9UK96 FBXO10 Q9UK96.S922.p_FBXO10 Q9UK96_S922sT935t_2_2_922_935 Q9UK96 Q9UK96 F-box only protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3594.3594.3 8 8 1.134 3 2 2 0 677.3063 1868.9962 S922s N926n T935t Hydrogen 921 (R) PsAAHnGQKVTAMAtR (I) PS(0.99)AAHN(1.0)GQKVT(0.0)AMAT(0.99)R K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T FBXO10 106734.1 1 2 5240.1 21.42 HUMAN 1 -3.7777 -1.3315 ENSNKSLSGELREVK-p Q8IX12;S1080-p ENSNKSLSGELREVK 0.974265885435344 0.0154494473436868 -0.00966666666666669 0.405 0.222189259183078 25.0517420711418 -0.00966666666666669 0.405 0.950125718764227 0.00312482566467392 -0.0655026641128435 5.05057263686482 Q8IX12 CCAR1 Q8IX12.S1080.p_CCAR1 Q8IX12_S1080s _1_1_1080_1080 Q8IX12 Q8IX12|Q8IX12-2 Cell division cycle and apoptosis regulator protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11950.11950.2 8.07 2.09 2.626 2 1 1 0 535.7767 990.5781 S1080s TMT10 1078 (K) SLsGELR (E) S(0.0)LS(0.99)GELR s:Phosphorylated S CCAR1 133503.3 1 10 1111.1 176.02 HUMAN 1 -0.2222 25.0517 ENSNPDLSGDENDDA-p O75530-2;S34-p ENSNPDLSGDENDDA 0.10416719530411 0.00192899241792152 -0.302666666666667 -0.87 20.732471052421 42.5655608606478 -0.302091811095564 -0.87 0.00844798034486142 5.53916004979753e-05 -4.03793983074648 -11.3477496476293 O75530 EED O75530.2.S34.p_EED O75530-2_S34s _1_1_34_34 O75530-2 O75530-2|O75530-3 Isoform 2 of Polycomb protein EED HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14605.14605.4 28.46 28.46 2.489 11 1 1 0 1288.851 5072.3841 S34s TMT10 23 (K) LSSDENSNPDLsGDENDDAVSIESGTNTERPDTPTNTPNAPGRK (S) LS(0.0)S(0.0)DENS(0.0)NPDLS(0.99)GDENDDAVS(0.0)IES(0.0)GT(0.0)NT(0.0)ERPDT(0.0)PT(0.0)NT(0.0)PNAPGRK K:TMT10,s:Phosphorylated S EED 53858.8 5 1 1998.1 103.39 HUMAN 1 -20.7325 -42.5656 ENSNTVRTPEENGNL-p A6NHB5;T797-p ENSNTVRTPEENGNL 0.195900066931994 0.174023017702176 -0.306 -0.186666666666667 13.8050444235516 9.98647872736396 -0.306 -0.186666666666667 0.0416385461837811 0.100311823970737 -2.65719361291646 -1.97856254408148 A6NHB5 NotFound A6NHB5.T797.p_NotFound A6NHB5_T797t _1_1_797_797 A6NHB5 A6NHB5|Q14202|A6NHN7 Zinc finger MYM-type protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15173.15173.4 15.97 11.52 1.115 3 1 1 0 791.4349 3082.7464 T797t TMT10 789 (K) VENSNTVRtPEENGNLGKIPVK (T) VENS(0.0)NT(0.0)VRT(0.99)PEENGNLGKIPVK K:TMT10,t:Phosphorylated T ZMYM3 156426.3 4 9 331.1 357.99 HUMAN 1 -13.805 -9.9865 ENSQVPQSPEDWRKS-p Q8IZT6;S425-p ENSQVPQSPEDWRKS 0.885069082704287 0.00224652614039878 -0.0216666666666667 -0.738333333333333 1.04817949450154 41.0489578319958 -0.0216666666666667 -0.738333333333334 0.785564864087091 7.85424088685522e-05 -0.285920463211546 -10.6133806915139 Q8IZT6 ASPM Q8IZT6.S425.p_ASPM Q8IZT6_S425s _1_1_425_425 Q8IZT6 Q8IZT6|Q8IZT6-2 Abnormal spindle-like microcephaly-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18934.18948.5 26.71 21.26 1.845 7 1 1 0 940.0446 4616.2245 S425s TMT10 399 (K) DNMAYMCTSQQTCKVPLSNENSQVPQsPEDWRK (S) DNMAY(0.0)MCT(0.0)S(0.0)QQT(0.0)CKVPLS(0.0)NENS(0.0)QVPQS(0.99)PEDWRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ASPM 413444.1 10 5 949.1 196.42 HUMAN 1 -1.0482 -41.049 ENSRKLLSAAKILAD-p Q9Y490;S858-p ENSRKLLSAAKILAD 0.273138896618994 0.00296875316905838 0.368666666666667 -0.651666666666667 10.6738074877102 38.0848096574042 0.368666666666667 -0.651666666666667 0.0856286803897927 0.000155424340866263 2.09905647100695 -9.3024251981129 Q9Y490 TLN1 Q9Y490.S858.p_TLN1 Q9Y490_S858s _1_1_858_858 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14424.14424.3 8.96 8.96 99 1 1 1 0 499.9836 1417.9709 S858s TMT10 855 (R) KLLsAAK (I) KLLS(1.0)AAK K:TMT10,s:Phosphorylated S TLN1 271930.4 1 9 267.1 395.2 HUMAN 1 10.6738 -38.0848 ENTEDQYSLVEDDED-p P27986;S608-p ENTEDQYSLVEDDED 0.319870603330238 0.0345236842118644 -0.222333333333333 -0.357666666666667 9.26669633411121 19.6947241062289 -0.222333333333333 -0.357666666666667 0.118394183448006 0.0107282179870153 -1.85453961121644 -3.8102428777602 P27986 PIK3R1 P27986.S608.p_PIK3R1 P27986_S608s_1_1_608_608 P27986 P27986|P27986-2|P27986-3 Phosphatidylinositol 3-kinase regulatory subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20789.20789.5 10.22 10.22 1.16 3 1 1 0 876.8197 4299.0933 N602n S608s TMT10 593 (K) KLNEWLGNEnTEDQYsLVEDDEDLPHHDEK (T) KLN(0.0)EWLGN(0.0)EN(0.99)T(0.0)EDQY(0.0)S(0.99)LVEDDEDLPHHDEK K:TMT10,n:Deamidated,s:Phosphorylated S PIK3R1 83939.2 1 1 4479.1 30.89 HUMAN 1 -9.2667 -19.6947 ENTEGQGTPKLKLKW-p Q9NVM6;T170-p ENTEGQGTPKLKLKW 0.0629683487287699 0.0148480538381072 0.546333333333333 0.501333333333333 26.0731554411515 25.3100325883929 0.546333333333333 0.501333333333334 0.00246992892363835 0.00294439953966377 5.32081034776796 5.11624032113516 Q9NVM6 DNAJC17 Q9NVM6.T170.p_DNAJC17 Q9NVM6_T170t _1_1_170_170 Q9NVM6 Q9NVM6 DnaJ homolog subfamily C member 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.4940.4940.3 12.31 7.77 7.141 2 1 1 0 695.3706 2004.1329 T170t TMT10 160 (R) GKAENTEGQGtPK (L) GKAENT(0.0)EGQGT(0.99)PK K:TMT10,t:Phosphorylated T DNAJC17 34800.8 3 2 3601.1 47.41 HUMAN 1 26.0732 25.31 ENTISEMSPKALVDT-p Q5T5P2;S1684-p ENTISEMSPKALVDT 0.46084376761032 0.00923219829203216 -0.101 -0.490666666666667 6.20394237511883 28.744757646655 -0.101 -0.490666666666667 0.239665632951794 0.00133513209308801 -1.32081402558092 -6.0500544557175 Q5T5P2 KIAA1217 Q5T5P2.S1684.p_KIAA1217 Q5T5P2_S1684s _1_1_1684_1684 Q5T5P2 Q5T5P2|Q5T5P2-3 Sickle tail protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17420.17420.2 16.66 16.66 2.236 3 1 1 0 957.987 1834.9985 S1684s TMT10 1675 (K) QLENTISEMsPK (A) QLENT(0.0)IS(0.0)EMS(0.99)PK K:TMT10,s:Phosphorylated S KIAA1217 214739.6 3 17 303.1 376.04 HUMAN 1 -6.2039 -28.7448 ENTRPKRSRPTSFAD-p Q641Q2;S284-p ENTRPKRSRPTSFAD 0.621652419131811 0.338751463202963 -0.083 -0.129 3.83882985776207 6.22839342535942 -0.083 -0.129 0.413158806523522 0.238320091782683 -0.886193669594973 -1.32482326600276 Q641Q2 FAM21A Q641Q2.S284.p_FAM21A Q641Q2_S284s _1_1_284_284 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2|Q9Y4E1-4|Q9Y4E1-2|E7ESD2|Q9Y4E1-6|Q9Y4E1-3|J3KP36|F8W7U3 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14391.14391.3 15.19 15.19 2.146 3 1 1 0 577.2878 1649.8809 S284s TMT10 284 (R) sRPTSFADELAAR (I) S(0.99)RPT(0.0)S(0.0)FADELAAR s:Phosphorylated S WASHC2A 147352.2 4 21 12.1 1178.3 HUMAN 1 -3.8388 -6.2284 ENTRQNGSNDSDRYS-p P42167;S177-p ENTRQNGSNDSDRYS 0.839286384548877 0.0191641361648226 0.033 0.354333333333333 1.47269927245465 23.6121291814007 0.033 0.354333333333333 0.712410107919858 0.00435298411035007 0.388579884346857 4.69520288929836 P42167 TMPO P42167.S177.p_TMPO P42167_S177sS180sS184s_3_3_177_184 P42167 P42167|G5E972|P42167-2|P42167-3 Lamina-associated polypeptide 2, isoforms beta/gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19608.19608.4 12.21 12.21 2.464 5 3 3 0 806.8326 3001.4387 Q174q S177s S180s S184s Hydrogen 174 (R) qNGsNDsDRYsDNEEDSKIELK (L) Q(1.0)NGS(0.99)NDS(0.99)DRY(0.0)S(0.99)DNEEDS(0.0)KIELK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S TMPO 50726.4 14 49 123.2 546.19 HUMAN 1 1.4727 23.6121 ENTSRAHTPLNTPDP-p Q9BYW2;T1853-p ENTSRAHTPLNTPDP 0.540716629644627 0.0799260797711512 -0.0913333333333333 0.287333333333333 4.92666411127673 14.5632052086413 -0.0913333333333333 0.287333333333333 0.321612995345385 0.0349686993480425 -1.09060161866302 2.79516512186314 Q9BYW2 SETD2 Q9BYW2.T1853.p_SETD2 Q9BYW2_T1853t _1_1_1853_1853 Q9BYW2 Q9BYW2|A0A1W2PPX9 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8577.8577.3 14.67 14.67 2.723 4 1 1 0 639.6682 1837.022 T1853t TMT10 1851 (R) AHtPLNTPDPSTK (L) AHT(0.99)PLNT(0.0)PDPS(0.0)T(0.0)K K:TMT10,t:Phosphorylated T SETD2 290615.4 4 22 58.1 711.11 HUMAN 1 -4.9267 14.5632 ENTSVGNSPNPSSAE-p Q96HH9;S225-p ENTSVGNSPNPSSAE 0.109204251400589 0.148215769520987 0.335666666666667 0.245333333333333 20.1548128548589 10.9167579900427 0.335666666666667 0.245333333333333 0.00964980893635892 0.0809700115070124 3.91225392210954 2.14057568092484 Q96HH9 GRAMD3 Q96HH9.S225.p_GRAMD3 Q96HH9_S221sS225s_2_2_221_225 Q96HH9 B7Z4W8|Q96HH9-3|Q96HH9-2|Q96HH9-4|E9PD09|Q96HH9-5 GRAM domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27549.27549.5 8.84 8.84 1.177 10 2 2 0 1168.5232 5677.6687 S221s S225s N233n TMT10 212 (K) SVCGHLENTsVGNsPNPSSAEnSFRADRPSSLPLDFNDEFSDLDGVVQQR (R) S(0.0)VCGHLEN(0.0)T(0.0)S(0.99)VGN(0.0)S(0.99)PN(0.0)PS(0.0)S(0.0)AEN(0.99)S(0.0)FRADRPS(0.0)S(0.0)LPLDFN(0.0)DEFS(0.0)DLDGVVQQR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated GRAMD2B 48324.7 3 10 735.1 235.43 HUMAN 1 20.1548 10.9168 ENVAGPRSADEADEL-p Q8TBE0;S85-p ENVAGPRSADEADEL 0.396849380512248 0.104651106694341 -0.114 -0.193333333333333 7.40968974925191 12.9525710355829 -0.114 -0.193333333333333 0.181564536398642 0.0506690657169668 -1.53255364660917 -2.50115767528675 Q8TBE0 BAHD1 Q8TBE0.S85.p_BAHD1 Q8TBE0_S85sS101s_2_2_85_101 Q8TBE0 Q8TBE0|Q8TBE0-2|Q8TBE0-3 Bromo adjacent homology domain-containing 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23900.23900.4 15.64 12.36 2.326 4 2 2 0 1159.5637 4475.3095 S85s S101s TMT10 77 (R) LENVAGPRsADEADELPPDLPKPPsPAPSSEDPGLAQPR (K) LENVAGPRS(0.99)ADEADELPPDLPKPPS(0.99)PAPS(0.0)S(0.0)EDPGLAQPR K:TMT10,s:Phosphorylated S BAHD1 85848.7 4 9 636.1 256.1 HUMAN 1 -7.4097 -12.9526 ENVGKVGSPLDYSLV-p Q96T23;S1359-p ENVGKVGSPLDYSLV 0.180200648028625 0.0105302419768036 -0.335666666666667 0.451333333333333 14.6826478762395 27.7435360215882 -0.335666666666667 0.451333333333333 0.0340200707434202 0.00168130458701997 -2.81914071645481 5.76565733438742 Q96T23 RSF1 Q96T23.S1359.p_RSF1 Q96T23_S1359s _1_1_1359_1359 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28019.28019.3 18.83 18.83 4.216 6 1 1 0 923.8098 2689.4449 S1359s TMT10 1357 (K) VGsPLDYSLVDLPSTNGQSPGK (A) VGS(0.99)PLDY(0.0)S(0.0)LVDLPS(0.0)T(0.0)NGQS(0.0)PGK K:TMT10,s:Phosphorylated S RSF1 165358.1 3 23 39.1 857.38 HUMAN 1 -14.6826 27.7435 ENVKPPGSPVAKLAK-p Q9NXL9;S915-p ENVKPPGSPVAKLAK 0.179935774950283 0.00109454193985794 -0.242 -1.14666666666667 14.7058767913383 49.9014785039955 -0.242 -1.14666666666667 0.0338385948681753 1.02294468362426e-05 -2.8234679865277 -15.6254436430512 Q9NXL9 MCM9 Q9NXL9.S915.p_MCM9 Q9NXL9_S915s _1_1_915_915 Q9NXL9 Q9NXL9|Q9NXL9-4 DNA helicase MCM9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21846.21846.4 23.12 23.12 15.748 2 1 1 0 757.674 2947.7071 S915s TMT10 898 (K) SLAQVEEPAIENVKPPGsPVAK (L) S(0.0)LAQVEEPAIENVKPPGS(0.99)PVAK K:TMT10,s:Phosphorylated S MCM9 128793.8 3 3 1757.1 117.14 HUMAN 1 -14.7059 -49.9015 ENVPKSGTPQLPSNR-p O00214-2;T180-p ENVPKSGTPQLPSNR 0.185922325619944 0.059584077048441 0.399 -0.413333333333333 14.3623011858966 16.3196970744452 0.399 -0.413333333333333 0.0366243462668449 0.0233362082942644 2.75968373200708 -3.12755378641555 O00214 LGALS8 O00214.2.T180.p_LGALS8 O00214-2_T180t _1_1_180_180 O00214-2 O00214-2|F6V2D4 Isoform 2 of Galectin-8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7615.7615.2 9.06 6.22 2.075 3 1 1 0 683.34 1285.7062 T180t TMT10 178 (K) SGtPQLPSNR (G) S(0.0)GT(0.99)PQLPS(0.0)NR t:Phosphorylated T LGALS8 40624.9 1 2 6014.1 14.65 HUMAN 1 14.3623 -16.3197 ENVPRSRSDVDMDAA-p O15085-2;S675-p ENVPRSRSDVDMDAA 0.376921100863547 0.13443265585608 -0.158666666666667 0.280333333333333 7.83350165373682 11.4863242478387 -0.158666666666667 0.280333333333333 0.164683403756127 0.0710178589802769 -1.6062637132082 2.24047776466706 O15085 ARHGEF11 O15085.2.S675.p_ARHGEF11 O15085-2_S675s _1_1_675_675 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8676.8676.2 9.65 9.65 1.155 3 1 1 0 952.4254 1823.8755 S675s TMT10 673 (R) SRsDVDMDAAAEATR (L) S(0.0)RS(0.99)DVDMDAAAEAT(0.0)R s:Phosphorylated S ARHGEF11 173153.4 2 11 228.1 424.05 HUMAN 1 -7.8335 11.4863 ENVRMNYSGDQGQTI-p Q5T4S7-2;S1878-p ENVRMNYSGDQGQTI 0.390796986935009 0.561609720559544 0.184333333333333 0.0796666666666667 7.54005413650413 3.37637921062841 0.184333333333333 0.0796666666666667 0.176195408282863 0.459581013920333 1.55525425188235 0.795755188147359 Q5T4S7 UBR4 Q5T4S7.2.S1878.p_UBR4 Q5T4S7-2_S1878s _1_1_1878_1878 Q5T4S7-2 Q5T4S7-2|Q5T4S7-4|Q5T4S7-3|Q5T4S7-5 Isoform 2 of E3 ubiquitin-protein ligase UBR4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9701.9701.2 11.62 11.62 1.866 3 1 1 0 839.8764 1598.7794 S1878s TMT10 1875 (R) MNYsGDQGQTIR (Q) MNY(0.0)S(0.99)GDQGQT(0.0)IR s:Phosphorylated S UBR4 583136.9 1 11 528.1 281.83 HUMAN 1 7.5401 3.3764 ENYFMRDSGSKAATD-p Q13263;S138-p ENYFMRDSGSKAATD 0.627745464328642 0.158205945251718 0.069 0.205 3.75695180414822 10.5333988276158 0.069 0.205 0.421022028713759 0.0884423181391789 0.870375959443753 2.0736624400191 Q13263 TRIM28 Q13263.S138.p_TRIM28 Q13263_S138s _1_1_138_138 Q13263 Q13263 Transcription intermediary factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21694.21694.3 16.3 8.71 1.167 3 1 1 0 733.6903 2119.0894 S138s TMT10 128 (K) DIVENYFMRDsGSK (A) DIVENY(0.0)FMRDS(0.99)GS(0.0)K K:TMT10,s:Phosphorylated S TRIM28 90316.8 2 4 118.1 555.36 HUMAN 1 3.757 10.5334 ENYRRNKSYSFIARM-p J3QK89;S913-p ENYRRNKSYSFIARM 0.930467350861374 0.749033197252292 -0.02 0.0336666666666667 0.621744669601658 1.734327281217 -0.02 0.0336666666666667 0.866613665426951 0.670760178886962 -0.176106157570102 0.449078892188023 J3QK89 NotFound J3QK89.S913.p_NotFound J3QK89_S913s _1_1_913_913 J3QK89 J3QK89|Q8IWX8 Calcium homeostasis endoplasmic reticulum protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15933.15933.2 11.29 4.54 2.068 3 1 1 0 576.7867 1072.5989 S913s TMT10 913 (K) sYSFIAR (M) S(0.99)Y(0.0)S(0.0)FIAR s:Phosphorylated S CHERP 105388.1 1 5 2291.1 89.54 HUMAN 1 -0.6217 1.7343 EPAEPPGTPPASHSH-p Q8N398;T978-p EPAEPPGTPPASHSH 0.78467655876107 0.763057248401207 0.0466666666666667 -0.0336666666666666 2.0273015461458 1.62319663957431 0.0466666666666667 -0.0336666666666666 0.627003327142511 0.688145597938081 0.514839709749914 -0.423593170464815 Q8N398 VWA5B2 Q8N398.T978.p_VWA5B2 Q8N398_T978t _1_1_978_978 Q8N398 Q8N398|Q8N398-2|E9PF42 von Willebrand factor A domain-containing protein 5B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25827.25827.4 23.74 23.74 1.927 8 1 1 0 1161.8403 4564.3798 T978t TMT10 959 (R) EVLPGALQVCSSEPAEPPGtPPASHSHLDAAPLPTVVYSK (G) EVLPGALQVCS(0.0)S(0.0)EPAEPPGT(0.99)PPAS(0.0)HS(0.0)HLDAAPLPT(0.0)VVY(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T VWA5B2 134815.6 1 3 3362.1 52.86 HUMAN 1 2.0273 -1.6232 EPAGRPESPGDYYLM-p Q9NVH0;S407-p EPAGRPESPGDYYLM 0.847544117529098 0.186273221037939 0.0286666666666667 0.135666666666667 1.39224438481938 9.59890221818954 0.0286666666666667 0.135666666666667 0.725730811023376 0.109675539192008 0.369567565604665 1.91136397503688 Q9NVH0 EXD2 Q9NVH0.S407.p_EXD2 Q9NVH0_S407s _1_1_407_407 Q9NVH0 Q9NVH0 Exonuclease 3'-5' domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23056.23056.4 18.09 20.01 6.633 3 1 1 0 716.6222 2783.4955 S407s TMT10 397 (K) LRFEPAGRPEsPGDYYLMVK (E) LRFEPAGRPES(0.99)PGDY(0.0)Y(0.0)LMVK K:TMT10,s:Phosphorylated S EXD2 71264.2 3 2 3121.1 60.26 HUMAN 1 1.3922 9.5989 EPAPPSLSPAVSVKS-p Q9HCS4;S325-p EPAPPSLSPAVSVKS 0.239911948391928 0.00541772429576951 -0.197 0.538333333333333 11.8488345810252 32.8879351182442 -0.197 0.538333333333334 0.0653305842205388 0.000514288115137969 -2.30555043975405 7.34808467779823 Q9HCS4 TCF7L1 Q9HCS4.S325.p_TCF7L1 Q9HCS4_S325s _1_1_325_325 Q9HCS4 Q9HCS4 Transcription factor 7-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19318.19318.3 13.62 13.62 2.222 3 1 1 0 682.376 1965.1421 S325s TMT10 317 (K) QEPAPPSLsPAVSVK (S) QEPAPPS(0.0)LS(0.99)PAVS(0.0)VK K:TMT10,s:Phosphorylated S TCF7L1 62800.8 2 3 2935.1 65.49 HUMAN 1 -11.8488 32.8879 EPAPRYPSPPMGSVS-p P46109;S107-p EPAPRYPSPPMGSVS 0.263920652188996 0.0478614132920434 0.191 0.238 10.9749362199911 17.6564615758495 0.191 0.238 0.0798925674515641 0.0171535432715085 2.15171895099102 3.39036132799036 P46109 CRKL P46109.S107.p_CRKL P46109_S107s _1_1_107_107 P46109 P46109 Crk-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26080.26080.3 12.91 12.58 1.153 6 1 1 0 1005.1497 2933.4552 S107s TMT10 105 (R) YPsPPMGSVSAPNLPTAEDNLEYVR (T) Y(0.0)PS(0.99)PPMGS(0.0)VS(0.0)APNLPT(0.0)AEDNLEY(0.0)VR s:Phosphorylated S CRKL 33890.5 3 1 2097.1 97.7 HUMAN 1 10.9749 17.6565 EPASEPGSPYPEGPR-p Q5VTI5;S271-p EPASEPGSPYPEGPR 0.924538682309066 0.129681076821148 -0.0153333333333333 0.187 0.671056108200721 11.6920848666403 -0.0153333333333333 0.187 0.856829457905606 0.0677316278261675 -0.189201012116238 2.27673323818529 Q5VTI5 NotFound Q5VTI5.S271.p_NotFound Q5VTI5_S271s _1_1_271_271 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16008.16008.3 16.93 16.93 1.869 3 1 1 0 852.7338 2476.2306 S271s TMT10 256 (K) ANGLPAGPEPASEPGsPYPEGPR (V) ANGLPAGPEPAS(0.0)EPGS(0.99)PY(0.0)PEGPR s:Phosphorylated S PLEKHA6 119745.7 1 8 52.1 743.36 HUMAN 1 -0.6711 11.6921 EPCRDKGSPAVKAHL-p O15119;S409-p EPCRDKGSPAVKAHL 0.521303704371294 0.0205095823216913 0.11 -0.330333333333333 5.23222487470056 23.1039693960379 0.11 -0.330333333333333 0.299762645252451 0.00489331372301203 1.14644929011485 -4.57389610879297 O15119 TBX3 O15119.S409.p_TBX3 O15119_S409s _1_1_409_409 O15119 O15119|O15119-2|O15119-3 T-box transcription factor TBX3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9695.9695.4 11.54 11.54 2.348 6 1 1 0 708.3713 2750.4962 S409s TMT10 395 (K) ISTTTSEEPCRDKGsPAVK (A) IS(0.0)T(0.0)T(0.0)T(0.0)S(0.0)EEPCRDKGS(0.99)PAVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TBX3 79786.8 4 3 1589.1 129.37 HUMAN 1 5.2322 -23.104 EPDAEGVSPPPVESQ-p P55347;S41-p EPDAEGVSPPPVESQ 0.858494501092491 0.0128335630021394 -0.0383333333333333 0.505666666666667 1.29156131108016 26.3502945778007 -0.0383333333333334 0.505666666666667 0.742752066690873 0.00231723746863267 -0.345495087420363 5.38689510304028 P55347 PKNOX1 P55347.S41.p_PKNOX1 P55347_S41s _1_1_41_41 P55347 P55347|P55347-2|H0YM69 Homeobox protein PKNOX1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19124.19124.4 18.94 18.76 1.816 5 1 1 0 949.1795 3713.7199 S41s TMT10 26 (K) TEQDPNCSEPDAEGVsPPPVESQTPMDVDK (Q) T(0.0)EQDPNCS(0.0)EPDAEGVS(0.99)PPPVES(0.0)QT(0.0)PMDVDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PKNOX1 48005.2 3 1 5478.1 18.94 HUMAN 1 -1.2916 26.3503 EPDATPPSPRTLLAM-p R4GMW8;S795-p EPDATPPSPRTLLAM 0.764738958266359 0.046191872087962 0.0456666666666667 0.256666666666667 2.23604238268865 17.8700675029715 0.0456666666666667 0.256666666666667 0.597579597922934 0.0163302656534703 0.56046323108282 3.43323190647496 R4GMW8 NotFound R4GMW8.S795.p_NotFound R4GMW8_S795s _1_1_795_795 R4GMW8 R4GMW8|A0A1W2PS85|P28715 BIVM-ERCC5 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9769.9769.3 13.16 10.23 1.942 3 1 1 0 811.7846 2353.3694 S795s TMT10 783 (K) LKTEKEPDATPPsPR (T) LKT(0.0)EKEPDAT(0.0)PPS(0.99)PR K:TMT10,s:Phosphorylated S BIVM-ERCC5 185876.1 3 5 561.1 271.77 HUMAN 1 2.236 17.8701 EPDHPFYSNISKDRR-p P18669;S134-p EPDHPFYSNISKDRR 0.827997063487557 0.945818175866251 0.037 0.0096666666666667 1.57611080080693 0.346926044998717 0.037 0.00752402317437261 0.695647005379113 0.923224658327143 0.412738801847594 0.100941340265937 P18669 PGAM1 P18669.S134.p_PGAM1 P18669_S134s _1_1_134_134 P18669 P18669|Q8N0Y7 Phosphoglycerate mutase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23118.23118.3 10.88 10.88 1.22 5 1 1 0 985.8047 2875.4377 S134s TMT10 118 (R) SYDVPPPPMEPDHPFYsNISK (D) S(0.0)Y(0.0)DVPPPPMEPDHPFY(0.0)S(0.99)NIS(0.0)K K:TMT10,s:Phosphorylated S PGAM1 28917.5 2 6 1193.1 167.89 HUMAN 1 1.5761 0.3469 EPDIQDSSGSEAQSV-p Q9BZF1;S808-p EPDIQDSSGSEAQSV 0.221440669353428 0.862901166327382 0.192833333333333 0.0183333333333333 12.6053888990331 0.902820408290877 0.192833333333333 0.0183333333333333 0.0548859404522264 0.812302816693386 2.44019727454614 0.249296864327289 Q9BZF1 OSBPL8 Q9BZF1.S808.p_OSBPL8 Q9BZF1_S807sS808s_2_2_807_808 Q9BZF1 Q9BZF1|Q9BZF1-2|Q9BZF1-3 Oxysterol-binding protein-related protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13807.13807.4 16.74 16.74 2.357 9 2 2 0 807.6198 3067.522 S807s S808s TMT10 796 (K) GYSSPEPDIQDssGSEAQSVKPSTR (R) GY(0.0)S(0.0)S(0.0)PEPDIQDS(0.99)S(0.99)GS(0.0)EAQS(0.0)VKPS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S OSBPL8 101821.3 3 11 1293.1 156.92 HUMAN 2 12.6054 0.9028 EPDKECKSLSPGKEN-p Q9H307;S441-p EPDKECKSLSPGKEN 0.137301954068809 0.00341353197412274 -0.851666666666667 0.890333333333333 17.6809331676597 36.8856646184399 -0.851666666666667 0.890333333333334 0.017057158428125 0.00020484885374693 -3.39797776862285 8.81501651398976 Q9H307 PNN Q9H307.S441.p_PNN Q9H307_S441sS443s_2_2_441_443 Q9H307 Q9H307|Q9H307-2 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26426.26426.5 12.54 7.26 8.937 3 2 2 0 1029.5154 4983.5902 S441s S443s TMT10 424 (K) ELEPEMEFEIEPDKECKsLsPGKENVSALDMEK (E) ELEPEMEFEIEPDKECKS(0.99)LS(0.99)PGKENVS(0.0)ALDMEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PNN 81726.4 10 14 180.1 480.36 HUMAN 1 -17.6809 36.8857 EPDKRKRSPTESVNT-p Q8WXG6;S1059-p EPDKRKRSPTESVNT 0.987209767606444 0.901720853058777 0.00266666666666665 0.0163333333333333 0.113207180509246 0.626348151586325 0.00266666666666664 0.0163333333333334 0.97426989257332 0.865695549511546 0.033771781028905 0.177316666834586 Q8WXG6 MADD Q8WXG6.S1059.p_MADD Q8WXG6_S1059s _1_1_1059_1059 Q8WXG6 Q8WXG6|Q8WXG6-2|A0A0A0MRB5|Q8WXG6-3|Q8WXG6-7|Q8WXG6-4|Q8WXG6-5|Q8WXG6-8 MAP kinase-activating death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8920.8920.5 13.09 8.01 2.935 4 1 1 0 666.9702 3250.8475 S1059s Hydrogen 1057 (R) KRsPTESVNTPVGKDPGLAGRGDPK (A) KRS(0.99)PT(0.0)ES(0.0)VNT(0.0)PVGKDPGLAGRGDPK K:TMT10-Lys-Only,s:Phosphorylated S MADD 184612.2 9 9 546.1 275.73 HUMAN 1 0.1132 0.6263 EPDQNLSSPEEVFHS-p Q5T9C2;S217-p EPDQNLSSPEEVFHS 0.318436709095685 0.515901623576143 0.187666666666667 -0.09 9.29941103855143 3.85909319703118 0.187666666666667 -0.0899999999999999 0.117505689757845 0.411235577759268 1.86020562952357 -0.889950617830538 Q5T9C2 FAM102A Q5T9C2.S217.p_FAM102A Q5T9C2_S216sS217s_2_2_216_217 Q5T9C2 Q5T9C2|Q5T9C2-2|Q5T9C2-3 Protein FAM102A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20561.20561.5 16.02 16.02 6.823 7 2 2 0 753.351 3602.8037 S216s S217s TMT10 198 (K) ARPTILSSGLPEEPDQNLssPEEVFHSGHSR (N) ARPT(0.0)ILS(0.0)S(0.0)GLPEEPDQNLS(0.99)S(0.99)PEEVFHS(0.0)GHS(0.0)R s:Phosphorylated S FAM102A 42240.5 1 8 2072.1 99.26 HUMAN 1 9.2994 -3.8591 EPDSDEHTPVEDEEP-p Q8N5F7;T161-p EPDSDEHTPVEDEEP 0.471067248334803 0.942309811585179 -0.104333333333333 -0.0083333333333333 6.03507246585118 0.369450120647426 -0.104333333333333 -0.00833333333333331 0.249168279498974 0.918448877975602 -1.29080906333309 -0.107248070657448 Q8N5F7 NKAP Q8N5F7.T161.p_NKAP Q8N5F7_S149sS157sT161t_3_3_149_161 Q8N5F7 Q8N5F7 NF-kappa-B-activating protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26512.26512.5 11.14 11.14 99 3 3 3 0 977.4753 4642.4334 S149s N152n S157s T161t TMT10 137 (R) IGELGAPEVWGLsPKnPEPDsDEHtPVEDEEPKK (S) IGELGAPEVWGLS(1.0)PKN(1.0)PEPDS(1.0)DEHT(1.0)PVEDEEPKK K:TMT10,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T NKAP 47251.6 2 6 2507.1 80.61 HUMAN 1 -6.0351 -0.3695 EPDSITKSISSPSVS-p P49792;S2802-p EPDSITKSISSPSVS 0.798614246316473 0.0352744280835241 -0.0733333333333333 0.348666666666667 1.8824011518654 19.5538629092705 -0.0733333333333334 0.348666666666667 0.648275911998242 0.0110818867869043 -0.482598510448102 3.78041477286973 P49792 RANBP2 P49792.S2802.p_RANBP2 P49792_S2802s _1_1_2802_2802 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16839.16839.4 15.68 11.7 2.167 9 1 1 0 780.413 3038.6647 S2802s TMT10 2802 (K) sISSPSVSSETMDKPVDLSTRK (E) S(0.99)IS(0.0)S(0.0)PS(0.0)VS(0.0)S(0.0)ET(0.0)MDKPVDLS(0.0)T(0.0)RK K:TMT10,s:Phosphorylated S RANBP2 362585.9 1 64 9.1 1298.62 HUMAN 1 -1.8824 19.5539 EPDSRGGSPQMDDIK-p Q13144;S544-p EPDSRGGSPQMDDIK 0.859063685343176 0.398483542554811 0.0523333333333333 0.245 1.2870121959422 5.31224830573973 0.0523333333333333 0.245 0.743530486648555 0.294289772615493 0.344399846092509 1.16073659980489 Q13144 EIF2B5 Q13144.S544.p_EIF2B5 Q13144_S544s _1_1_544_544 Q13144 Q13144 Translation initiation factor eIF-2B subunit epsilon HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12946.12946.2 13.2 7.7 99 1 1 1 0 793.3871 1505.8034 S544s TMT10 542 (R) GGsPQMDDIK (V) GGS(1.0)PQMDDIK K:TMT10,s:Phosphorylated S EIF2B5 81120.1 2 2 3244.1 56.12 HUMAN 1 1.287 5.3122 EPEAAVISNGEH___-p Q01581;S516-p EPEAAVISNGEH___ 0.489618027505037 0.20090220225381 0.101666666666667 -0.126 5.71709628450438 9.16892469303351 0.101666666666667 -0.126 0.268096022966827 0.121089791303922 1.23399815645778 -1.83693418503864 Q01581 HMGCS1 Q01581.S516.p_HMGCS1 Q01581_S516s_1_1_516_516 Q01581 Q01581 Hydroxymethylglutaryl-CoA synthase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19443.19904.2 19.8 19.8 10.186 2 1 1 0 1043.999 2006.0392 S516s N517n TMT10 503 (R) LPATAAEPEAAVIsnGEH (-) LPAT(0.0)AAEPEAAVIS(0.99)N(1.0)GEH s:Phosphorylated S,n:Deamidated HMGCS1 57863.1 10 3 2182.1 94.24 HUMAN 1 5.7171 -9.1689 EPEDAAGSRQGLDGP-p Q03169;S68-p EPEDAAGSRQGLDGP 0.622515510428896 0.382081669851534 0.08 -0.101 3.82519756001157 5.55119764284683 0.08 -0.101 0.414457729979292 0.278535295301066 0.883564960292219 -1.20391122236632 Q03169 TNFAIP2 Q03169.S68.p_TNFAIP2 Q03169_S68s _1_1_68_68 Q03169 Q03169 Tumor necrosis factor alpha-induced protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14663.14663.5 19.28 17.27 3.744 4 1 1 0 835.2491 4092.2383 S68s TMT10 53 (K) KKGQPSSAEPEDAAGsRQGLDGPPPTVEELK (A) KKGQPS(0.0)S(0.0)AEPEDAAGS(0.99)RQGLDGPPPT(0.0)VEELK K:TMT10,s:Phosphorylated S TNFAIP2 73059.4 2 2 1938.1 106.12 HUMAN 1 3.8252 -5.5512 EPEEKQETENEEASV-p Q9C0E8;T395-p EPEEKQETENEEASV 0.74688911992144 0.318667388255672 0.046 0.104 2.40643849820102 6.56714798469317 0.046 0.104 0.574587468754477 0.220437360172532 0.597041351756587 1.384651913034 Q9C0E8 KIAA1715 Q9C0E8.T395.p_KIAA1715 Q9C0E8_T395t _1_1_395_395 Q9C0E8 Q9C0E8-4|Q9C0E8-2 Endoplasmic reticulum junction formation protein lunapark HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26731.26731.5 17.91 17.91 5.052 11 1 1 0 1077.8938 5305.4655 T395t TMT10 383 (K) ASDSEEPEEKQEtENEEASVIETNSTVPGADSIPDPELSGESLTAE (-) AS(0.0)DS(0.0)EEPEEKQET(0.99)ENEEAS(0.0)VIET(0.0)NS(0.0)T(0.0)VPGADS(0.0)IPDPELS(0.0)GES(0.0)LT(0.0)AE K:TMT10,t:Phosphorylated T LNPK 48081.4 1 9 1776.1 115.62 HUMAN 1 2.4064 6.5671 EPEENIDSNSESERE-p P29374;S453-p EPEENIDSNSESERE 0.719908473757462 0.0241060436278219 0.0826666666666667 0.792666666666667 2.69423982902567 22.0474955784815 0.0826666666666667 0.792666666666667 0.537744549451573 0.00624094624864456 0.657594009343505 4.32820909790673 P29374 ARID4A P29374.S453.p_ARID4A P29374_S453sS455s_2_2_453_455 P29374 P29374|P29374-2|P29374-3 AT-rich interactive domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17458.17458.3 10.06 10.06 2.89 4 2 2 0 1027.7916 2921.4264 S453s S455s TMT10 445 (K) SEPEENIDsNsESEREEIELK (S) S(0.0)EPEENIDS(0.99)NS(0.99)ES(0.0)EREEIELK K:TMT10,s:Phosphorylated S ARID4A 143719.1 2 13 532.1 280.77 HUMAN 1 2.6942 22.0475 EPELDEESEDEVEEE-p Q9UN86-2;S149-p EPELDEESEDEVEEE 0.93931869762336 0.960532095177721 0.0253333333333333 -0.00999999999999995 0.530353014850144 0.251830164488906 0.0253333333333333 -0.00999999999999997 0.885043666421774 0.943663122512817 0.151534200475321 -0.0740008780571571 Q9UN86 G3BP2 Q9UN86.2.S149.p_G3BP2 Q9UN86-2_S149s _1_1_149_149 Q9UN86-2 Q9UN86|Q9UN86-2 Isoform B of Ras GTPase-activating protein-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21167.21167.3 22.28 22.28 3.539 3 1 1 0 1233.8248 3619.4929 S149s TMT10 133 (R) YEDEVFGDSEPELDEEsEDEVEEEQEER (Q) Y(0.0)EDEVFGDS(0.0)EPELDEES(0.99)EDEVEEEQEER s:Phosphorylated S G3BP2 50873.6 1 14 1003.2 189.39 HUMAN 1 0.5304 -0.2518 EPELDLRSIKEVDEA-p P20810-6;S394-p EPELDLRSIKEVDEA 0.182193984362319 0.521347361128808 0.269 -0.0956666666666666 14.5467489086442 3.8010376123047 0.269 -0.0956666666666666 0.0351014542109493 0.416769797325035 2.79386788894603 -0.878757981365509 P20810 CAST P20810.6.S394.p_CAST P20810-6_S394s _1_1_394_394 P20810-6 P20810-6|P20810-7|P20810-10 Isoform 6 of Calpastatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19579.19579.4 12.55 11.45 99 1 1 1 0 710.1363 2757.5601 S394s TMT10 385 (R) QAEPELDLRsIKEVDEAK (A) QAEPELDLRS(1.0)IKEVDEAK K:TMT10,s:Phosphorylated S CAST 85340.8 1 10 314.1 369.19 HUMAN 1 14.5467 -3.801 EPEPDGRSRRGGGRS-p P22735;S35-p EPEPDGRSRRGGGRS 0.306684187031916 0.616175476545817 0.151 -0.058 9.60885885112773 2.85814363097343 0.151 -0.058 0.109424385118154 0.517828127573551 1.91382853071888 -0.691354959378677 P22735 TGM1 P22735.S35.p_TGM1 P22735_S35s _1_1_35_35 P22735 P22735 Protein-glutamine gamma-glutamyltransferase K HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19522.19522.3 7.71 7.71 1.115 4 1 1 0 1003.1442 2927.4485 S35s TMT10 12 (R) WGGNPLQPPTTPSPEPEPEPDGRsR (R) WGGNPLQPPT(0.0)T(0.0)PS(0.0)PEPEPEPDGRS(0.99)R s:Phosphorylated S TGM1 90583.9 1 2 5918.1 15.36 HUMAN 1 9.6089 -2.8581 EPEPPVDSEPGEPPP-p P51116;S533-p EPEPPVDSEPGEPPP 0.126572282263763 0.924133970760431 0.277 -0.0206666666666666 18.6164443243157 0.48348076730548 0.277 -0.0206666666666666 0.0137516739759772 0.894647439416572 3.58811400970244 -0.138760716943237 P51116 FXR2 P51116.S533.p_FXR2 P51116_S533s _1_1_533_533 P51116 P51116 Fragile X mental retardation syndrome-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27645.27645.4 28.09 22.74 4.749 13 1 1 0 1267.3569 4986.442 S533s TMT10 502 (R) YNSSSISSVLKDPDSNPYSLLDTSEPEPPVDsEPGEPPPASAR (R) Y(0.0)NS(0.0)S(0.0)S(0.0)IS(0.0)S(0.0)VLKDPDS(0.0)NPY(0.0)S(0.0)LLDT(0.0)S(0.0)EPEPPVDS(0.99)EPGEPPPAS(0.0)AR K:TMT10,s:Phosphorylated S FXR2 74564.3 2 4 844.1 213.98 HUMAN 1 18.6164 -0.4835 EPERGRLTPSPDIIV-p Q8WXI9;T120-p EPERGRLTPSPDIIV 0.946134394492223 0.102953723024504 -0.012 0.186 0.473596306599225 13.0419760304412 -0.012 0.186 0.896685959094327 0.0496366424420025 -0.136068554533115 2.51724708536546 Q8WXI9 GATAD2B Q8WXI9.T120.p_GATAD2B Q8WXI9_T120t _1_1_120_120 Q8WXI9 Q8WXI9|A0A0U1RRM1 Transcriptional repressor p66-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19150.19150.3 24.13 24.13 1.138 5 1 1 0 768.7126 2224.1568 T120t Hydrogen 117 (R) GRLtPSPDIIVLSDNEASSPR (S) GRLT(0.99)PS(0.0)PDIIVLS(0.0)DNEAS(0.0)S(0.0)PR t:Phosphorylated T GATAD2B 65601.9 8 1 870.1 209.9 HUMAN 1 -0.4736 13.042 EPERRFLSPEFIPRR-p P49406;S77-p EPERRFLSPEFIPRR 0.262394171681466 0.0084962313920477 -0.164 -0.499666666666667 11.0195858925332 29.3868589155182 -0.164 -0.499666666666667 0.079075402419945 0.00115163301954832 -2.15954098360519 -6.23809885285518 P49406 MRPL19 P49406.S77.p_MRPL19 P49406_S77s _1_1_77_77 P49406 P49406|A0A0A0MRF4 39S ribosomal protein L19, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28618.28618.2 12.06 12.06 99 1 1 1 0 707.8688 1334.767 S77s TMT10 75 (R) FLsPEFIPR (R) FLS(1.0)PEFIPR s:Phosphorylated S MRPL19 33819.6 1 1 6364.1 12.06 HUMAN 1 -11.0196 -29.3869 EPESEHGSEPDFLHN-p Q8WVM7;S1142-p EPESEHGSEPDFLHN 0.219245224336186 0.0700012029432181 0.243666666666667 -0.291333333333333 12.6894244445635 15.354565110985 0.243666666666667 -0.291333333333333 0.0538341122273548 0.0291436195532046 2.45525057556874 -2.9432419350527 Q8WVM7 STAG1 Q8WVM7.S1142.p_STAG1 Q8WVM7_S1142s _1_1_1142_1142 Q8WVM7 Q8WVM7|Q68DW7 Cohesin subunit SA-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24513.24513.5 22.59 22.59 3.367 4 1 1 0 983.0645 4831.3245 S1142s TMT10 1124 (R) ENSRPMGDQIQEPESEHGsEPDFLHNPQMQISWLGQPK (L) ENS(0.0)RPMGDQIQEPES(0.0)EHGS(0.99)EPDFLHNPQMQIS(0.0)WLGQPK K:TMT10,s:Phosphorylated S STAG1 145394.7 2 4 2727.1 72.59 HUMAN 1 12.6894 -15.3546 EPEVLQDSLDRCYST-p H7BY70;S440-p EPEVLQDSLDRCYST 0.207219378790471 0.669069046411955 -0.248666666666667 0.0426666666666667 13.2150577956656 2.38566593324274 -0.248666666666667 0.0426666666666667 0.047697346654089 0.577342338102167 -2.54989237469123 0.592538537322139 H7BY70 NotFound H7BY70.S440.p_NotFound H7BY70_S440s _1_1_440_440 H7BY70 H7BY70 Neuroblastoma breakpoint family member 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21724.21724.3 12.96 12.96 99 1 1 1 0 856.1063 2486.339 S440s TMT10 427 (R) ELLDEKEPEVLQDsLDR (C) ELLDEKEPEVLQDS(1.0)LDR K:TMT10,s:Phosphorylated S NBPF20 657983.8 1 1 6234.1 12.96 HUMAN 1 -13.2151 2.3857 EPEVNGGSGDAVPSG-p P49321-3;S747-p EPEVNGGSGDAVPSG 0.361700229597547 0.0214176435991247 0.199666666666667 0.398 8.20777100669813 22.8240923943749 0.199666666666667 0.398 0.151085539368875 0.00521904162419729 1.67118535793342 4.50796670061301 P49321 NASP P49321.3.S747.p_NASP P49321-3_S747s_1_1_747_747 P49321-3 P49321-3|P49321-4|P49321-2|Q5T624 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18291.18291.3 23.81 23.81 5.334 4 1 1 0 1295.8762 3804.6576 N744n S747s TMT10 739 (K) QEPEVnGGsGDAVPSGNEVSENMEEEAENQAESR (A) Q(0.0)EPEVN(0.99)GGS(0.99)GDAVPS(0.0)GN(0.0)EVS(0.0)EN(0.0)M(0.0)EEEAEN(0.0)QAES(0.0)R n:Deamidated,s:Phosphorylated S NASP 86552 4 27 87.1 626.46 HUMAN 1 8.2078 22.8241 EPEVVGESDSEVEGD-p P55081;S116-p EPEVVGESDSEVEGD 0.371635125686735 0.0439711539603473 0.141333333333333 0.318666666666667 7.9711972948507 18.1725957239086 0.141333333333333 0.318666666666667 0.159543924422023 0.0152314211865471 1.63016369618619 3.49438450354081 P55081 MFAP1 P55081.S116.p_MFAP1 P55081_S116s _1_1_116_116 P55081 P55081 Microfibrillar-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24025.24349.2 23.55 20.36 2.354 2 1 1 0 1256.0788 2431.1826 S116s TMT10 107 (K) IVEPEVVGEsDSEVEGDAWR (M) IVEPEVVGES(0.99)DS(0.0)EVEGDAWR s:Phosphorylated S MFAP1 51957.5 3 6 354.1 349.52 HUMAN 1 7.9712 18.1726 EPFRRRLSFEASNPP-p Q92545;S1155-p EPFRRRLSFEASNPP 0.916963697628859 0.169712993171539 -0.0163333333333333 0.157 0.73377867316831 10.1300226476667 -0.0163333333333334 0.157 0.84454371185574 0.097050490622586 -0.205698425839291 2.00348707389054 Q92545 TMEM131 Q92545.S1155.p_TMEM131 Q92545_S1155s _1_1_1155_1155 Q92545 Q92545 Transmembrane protein 131 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22126.22126.5 17.15 17.15 2.48 2 1 1 0 557.8888 2705.4473 S1155s TMT10 1153 (R) RLsFEASNPPFDVGRPFDLRR (I) RLS(0.99)FEAS(0.0)NPPFDVGRPFDLRR s:Phosphorylated S TMEM131 205932.9 8 1 789.1 224.94 HUMAN 1 -0.7338 10.13 EPGAAPGSPPDSPGR-p Q96C34;S71-p EPGAAPGSPPDSPGR 0.677586717703107 0.663837625126455 0.0636666666666667 -0.0506666666666666 3.16372009072842 2.43585560524569 0.0636666666666667 -0.0506666666666666 0.482645199469116 0.57070862956687 0.753473971449072 -0.603223338995763 Q96C34 RUNDC1 Q96C34.S71.p_RUNDC1 Q96C34_S71s _1_1_71_71 Q96C34 Q96C34|Q96C34-2 RUN domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24804.24804.4 19.52 19.52 3.088 4 1 1 0 747.8504 2908.4162 S71s TMT10 51 (R) PGATAFLEEATAEEPGAAPGsPPDSPGR (T) PGAT(0.0)AFLEEAT(0.0)AEEPGAAPGS(0.99)PPDS(0.0)PGR s:Phosphorylated S RUNDC1 68155.4 3 1 1546.1 132.74 HUMAN 1 3.1637 -2.4359 EPGAGTPSPVRLHAL-p Q96P11-2;S327-p EPGAGTPSPVRLHAL 0.567420621818625 0.0101806434030066 0.0813333333333333 -0.549666666666667 4.53203310245598 27.9858190730584 0.0813333333333333 -0.549666666666667 0.352205951051449 0.00159007676938216 1.01755695124349 -5.8335152994199 Q96P11 NSUN5 Q96P11.2.S327.p_NSUN5 Q96P11-2_S327s _1_1_327_327 Q96P11-2 Q96P11-2|Q96P11-5|Q63ZY6|Q63ZY6-5|Q63ZY6-4 Isoform 2 of Probable 28S rRNA (cytosine-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18503.18503.3 15.46 10.97 1.141 2 1 1 0 956.8283 2788.5056 S327s TMT10 317 (R) QLEEPGAGTPsPVRLHALAGFQQR (A) QLEEPGAGT(0.0)PS(0.99)PVRLHALAGFQQR s:Phosphorylated S NSUN5 51151.8 4 3 2119.1 96.89 HUMAN 1 4.532 -27.9858 EPGAPAPSPAAADKR-p Q8NEZ4-3;S28-p EPGAPAPSPAAADKR 0.574498176987848 0.0187318127868551 -0.117666666666667 0.328666666666667 4.43001722640656 23.7656712360802 -0.117666666666667 0.328666666666667 0.360577212779665 0.00420177580927833 -0.998485870293968 4.73226999994083 Q8NEZ4 KMT2C Q8NEZ4.3.S28.p_KMT2C Q8NEZ4-3_S28s _1_1_28_28 Q8NEZ4-3 Q8NEZ4-3|H0YMU7 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16306.16306.4 17.3 17.3 8.169 2 1 1 0 799.9051 3116.6305 S28s TMT10 8 (K) SVEQPQPPPPPPEEPGAPAPsPAAADK (R) S(0.0)VEQPQPPPPPPEEPGAPAPS(0.99)PAAADK K:TMT10,s:Phosphorylated S KMT2C 554869.1 1 1 88.1 626.31 HUMAN 1 -4.43 23.7657 EPGEDCPSPQPAPAS-p Q86YN6;S256-p EPGEDCPSPQPAPAS 0.0482466396076474 0.108319423603399 -0.66 -0.399 29.1933633211074 12.75326697346 -0.66 -0.399 0.00120410308167153 0.05304852374068 -6.19040763337959 -2.46537848686336 Q86YN6 PPARGC1B Q86YN6.S256.p_PPARGC1B Q86YN6_S256sS263s_2_2_256_263 Q86YN6 Q86YN6|Q86YN6-3|Q86YN6-2 Peroxisome proliferator-activated receptor gamma coactivator 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12489.12489.4 14.64 14.64 99 2 2 2 0 855.9201 3260.7188 S256s S263s TMT10 242 (R) LPAKEDKEPGEDCPsPQPAPAsPR (D) LPAKEDKEPGEDCPS(1.0)PQPAPAS(1.0)PR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PPARGC1B 115103.2 1 3 3638.1 46.37 HUMAN 1 -29.1934 -12.7533 EPGGSHGSETEDTGR-p Q9UKJ3;S653-p EPGGSHGSETEDTGR 0.191011115230049 0.745434440541611 0.220666666666667 0.0363333333333333 14.0565281299758 1.76089827781124 0.220666666666667 0.0363333333333333 0.0392958952104429 0.666668863757927 2.70330306236213 0.455124522384107 Q9UKJ3 GPATCH8 Q9UKJ3.S653.p_GPATCH8 Q9UKJ3_S653s _1_1_653_653 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8979.8979.4 27.2 27.2 1.161 7 1 1 0 907.9069 3548.6382 S653s TMT10 630 (R) MDAPASGSACSGLNKQEPGGSHGsETEDTGR (S) MDAPAS(0.0)GS(0.0)ACS(0.0)GLNKQEPGGS(0.0)HGS(0.99)ET(0.0)EDT(0.0)GR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GPATCH8 165107.3 10 5 231.1 422.52 HUMAN 1 14.0565 1.7609 EPGKRRKSFCISTLA-p Q69YH5;S977-p EPGKRRKSFCISTLA 0.177195837076097 0.780644778098735 -0.307666666666667 -0.034 14.8947634810117 1.48860697002371 -0.307666666666667 -0.034 0.0323984066291765 0.709805406509966 -2.85873718001573 -0.392274653099948 Q69YH5 CDCA2 Q69YH5.S977.p_CDCA2 Q69YH5_S977s _1_1_977_977 Q69YH5 Q69YH5|E9PEI0 Cell division cycle-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23896.23896.2 8.78 8.78 8.777 4 1 1 0 890.4601 1699.9453 S977s TMT10 977 (K) sFCISTLANTK (A) S(0.99)FCIS(0.0)T(0.0)LANT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CDCA2 114214.8 1 15 407.1 324.13 HUMAN 1 -14.8948 -1.4886 EPGMLLGSPAGSSSI-p Q8TBC5-3;S196-p EPGMLLGSPAGSSSI 0.959656130624186 0.183397422422996 0.008 0.148333333333333 0.345920341433878 9.68863211709897 0.00799999999999999 0.148333333333333 0.923438475882537 0.107432773649594 0.100668372569533 1.92691028276178 Q8TBC5 ZSCAN18 Q8TBC5.3.S196.p_ZSCAN18 Q8TBC5-3_S196s _1_1_196_196 Q8TBC5-3 Q8TBC5-3|Q8TBC5-2 Isoform 3 of Zinc finger and SCAN domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36889.36889.4 33.79 29.45 3.612 7 1 1 0 1064.8009 4176.215 S196s TMT10 175 (K) KAASLVEGLADVLEEPGMLLGsPAGSSSILSDGVYER (H) KAAS(0.0)LVEGLADVLEEPGMLLGS(0.99)PAGS(0.0)S(0.0)S(0.0)ILS(0.0)DGVY(0.0)ER K:TMT10,s:Phosphorylated S ZSCAN18 61394 8 2 1147.1 172.79 HUMAN 1 0.3459 9.6886 EPGPGCVTPGPALGF-p J3KNL6;T1988-p EPGPGCVTPGPALGF 0.216176876680908 0.0652824511898605 0.208 0.227 12.8207615315175 15.771128376662 0.208 0.227 0.0522304595321939 0.0264781209911515 2.47881872030152 3.02226907941076 J3KNL6 SEC16A J3KNL6.T1988.p_SEC16A J3KNL6_T1988t _1_1_1988_1988 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.37202.37202.4 24.78 18.68 2.014 2 1 1 0 1175.3563 4618.4241 T1988t Hydrogen 1968 (R) VPMFPVPLPPGPLEPGPGCVtPGPALGFLEPSGPGLPPGVPPLQER (R) VPMFPVPLPPGPLEPGPGCVT(0.99)PGPALGFLEPS(0.0)GPGLPPGVPPLQER C:Carbamidomethylation,t:Phosphorylated T SEC16A 253486.5 8 36 15.1 1143.82 HUMAN 1 12.8208 15.7711 EPGPQGWSPRERAAL-p Q9H773;S85-p EPGPQGWSPRERAAL 0.806637424704846 0.309804184181098 0.0346666666666667 0.142666666666667 1.79647634499486 6.72559810500615 0.0346666666666667 0.142666666666667 0.661229720183109 0.212539761792097 0.463243173107156 1.41251481392273 Q9H773 DCTPP1 Q9H773.S85.p_DCTPP1 Q9H773_S85s _1_1_85_85 Q9H773 Q9H773 dCTP pyrophosphatase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11952.11952.2 9.46 9.46 8.457 2 1 1 0 846.8815 1612.7917 S85s TMT10 75 (K) TDGEPGPQGWsPR (E) T(0.0)DGEPGPQGWS(0.99)PR s:Phosphorylated S DCTPP1 18794.6 3 2 1673.1 121.97 HUMAN 1 1.7965 6.7256 EPGTAADSQQIHEEK-p Q9BXW9;S1257-p EPGTAADSQQIHEEK 0.558609525843344 0.262278457197594 -0.116 0.141333333333333 4.66912321081962 7.65741606624298 -0.116 0.141333333333333 0.341261801388132 0.171497736879962 -1.04305865365074 1.57519182694962 Q9BXW9 FANCD2 Q9BXW9.S1257.p_FANCD2 Q9BXW9_S1257s _1_1_1257_1257 Q9BXW9 Q9BXW9-1 Fanconi anemia group D2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9589.9589.4 12.07 12.07 5.802 2 1 1 0 662.8557 2568.4236 S1257s TMT10 1248 (K) KIEPGTAADsQQIHEEK (L) KIEPGT(0.0)AADS(0.99)QQIHEEK K:TMT10,s:Phosphorylated S FANCD2 165894.1 1 7 960.1 194.41 HUMAN 1 -4.6691 7.6574 EPGVERSSPSKCPSL-p P38398;S1497-p EPGVERSSPSKCPSL 0.219245224336186 0.00179618067818409 -0.267666666666667 -1.084 12.6890341403968 43.2498196709841 -0.267666666666667 -1.084 0.05383895056249 4.73170905693341e-05 -2.45518061260748 -11.6942908257563 P38398 BRCA1 P38398.S1497.p_BRCA1 P38398_S1497s _1_1_1497_1497 P38398 P38398-7|P38398-4|P38398-8|P38398-3|P38398-5|P38398-6 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7408.7408.5 12.75 6 1.373 4 1 1 0 605.9126 2945.5718 S1497s TMT10 1488 (K) NKEPGVERSsPSKCPSLDDR (W) NKEPGVERS(0.0)S(0.99)PS(0.0)KCPS(0.0)LDDR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BRCA1 210227.6 8 19 106.1 588.91 HUMAN 1 -12.689 -43.2498 EPHQGPGTPESKKAT-p Q14980;T2000-p EPHQGPGTPESKKAT 0.688680937205065 0.00476719426519808 0.0946666666666666 -0.895666666666667 3.03948231249784 33.9390535248045 0.0946666666666666 -0.895666666666667 0.496651519752871 0.000403733370595913 0.728420254598623 -7.71169118188234 Q14980 NUMA1 Q14980.T2000.p_NUMA1 Q14980_T2000t _1_1_2000_2000 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10367.10367.3 19.07 19.07 4.419 3 1 1 0 820.1148 2378.3647 T2000t TMT10 1990 (R) VSLEPHQGPGtPESKK (A) VS(0.0)LEPHQGPGT(0.99)PES(0.0)KK K:TMT10,t:Phosphorylated T NUMA1 239339.3 18 32 31.1 900.97 HUMAN 1 3.0395 -33.9391 EPITETASPRKTEDS-p Q8NDI1;S295-p EPITETASPRKTEDS 0.880578075090593 0.629333069022945 0.023 -0.0533333333333333 1.08663112879999 2.73440145473719 0.023 -0.0533333333333333 0.778640316897266 0.532794649096249 0.295469958579551 -0.665841105041246 Q8NDI1 EHBP1 Q8NDI1.S295.p_EHBP1 Q8NDI1_S295s _1_1_295_295 Q8NDI1 Q8NDI1|Q8NDI1-2|Q8NDI1-3 EH domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.32301.32301.3 26.51 26.51 1.126 6 1 1 0 1418.3004 4172.9258 S295s TMT10 261 (K) DLATVNSNPFDDPDAAELNPFGDPDSEEPITETAsPR (K) DLAT(0.0)VNS(0.0)NPFDDPDAAELNPFGDPDS(0.0)EEPIT(0.0)ET(0.0)AS(0.99)PR s:Phosphorylated S EHBP1 140642.4 4 2 285.1 385.52 HUMAN 1 1.0866 -2.7344 EPIVEMRTEDERVTN-p O15394;T774-p EPIVEMRTEDERVTN 0.513311363016096 0.0716509013021284 -0.100666666666667 0.212666666666667 5.35330175613717 15.2162287338779 -0.100666666666667 0.212666666666667 0.29152098613002 0.0300868781113852 -1.16842645915832 2.91716696486571 O15394 NCAM2 O15394.T774.p_NCAM2 O15394_T774t _1_1_774_774 O15394 O15394|H9KV31 Neural cell adhesion molecule 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10356.10356.4 13.24 8.87 7.621 2 1 1 0 608.0492 2349.212 T774t TMT10 763 (K) DGSKEPIVEMRtEDER (V) DGS(0.0)KEPIVEMRT(0.99)EDER K:TMT10,t:Phosphorylated T NCAM2 93843.3 1 2 1267.1 160.16 HUMAN 1 -5.3533 15.2162 EPKAGTDSPVSCASV-p Q69YH5;S710-p EPKAGTDSPVSCASV 0.384110837361105 0.464795764378439 -0.202666666666667 -0.120333333333333 7.69361797170487 4.4370382655992 -0.202666666666667 -0.120333333333333 0.170074108378561 0.359994755122857 -1.58196204862044 -0.999617848163384 Q69YH5 CDCA2 Q69YH5.S710.p_CDCA2 Q69YH5_S710s _1_1_710_710 Q69YH5 Q69YH5|E9PEI0 Cell division cycle-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8237.8237.4 18.12 11.15 1.293 7 1 1 0 894.6842 3495.7476 S710s TMT10 696 (K) NKSESENEPKAGTDsPVSCASVTEER (V) NKS(0.0)ES(0.0)ENEPKAGT(0.0)DS(0.99)PVS(0.0)CAS(0.0)VT(0.0)EER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CDCA2 114214.8 3 10 407.1 324.13 HUMAN 1 -7.6936 -4.437 EPKALPQTPRPRSRS-p Q9UQ35;T1492-p EPKALPQTPRPRSRS 0.601539136153653 0.507853627064377 0.071 0.145666666666667 4.07678207543877 3.94373247394931 0.071 0.145666666666667 0.391130598432797 0.403298635467245 0.931778391798123 0.906206731520775 Q9UQ35 SRRM2 Q9UQ35.T1492.p_SRRM2 Q9UQ35_T1492t _1_1_1492_1492 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6644.6644.3 12.59 12.59 99 1 1 1 0 448.9164 1264.7687 T1492t TMT10 1488 (K) ALPQtPRPR (S) ALPQT(1.0)PRPR t:Phosphorylated T SRRM2 300351.7 11 93 2.1 3310.34 HUMAN 1 4.0768 3.9437 EPKKETESEAEDNLD-p A9Z1X7;S883-p EPKKETESEAEDNLD 0.738853206673819 0.0476008280784193 0.0543333333333333 0.332 2.49306283462249 17.688230362393 0.0543333333333333 0.332 0.563240294035634 0.0170285223525909 0.615423085246432 3.39672141289796 A9Z1X7 NotFound A9Z1X7.S883.p_NotFound A9Z1X7_S883s _1_1_883_883 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18856.18856.3 18.84 18.84 2.225 2 1 1 0 759.0149 2195.0603 S883s TMT10 880 (K) ETEsEAEDNLDDLEK (H) ET(0.0)ES(0.99)EAEDNLDDLEK K:TMT10,s:Phosphorylated S SRRM1 103445.7 19 51 8.1 1346.57 HUMAN 1 2.4931 17.6882 EPKPQPNSREKAKTR-p Q86V48;S690-p EPKPQPNSREKAKTR 0.43497101841619 0.00570011283768187 -0.108333333333333 -0.511666666666667 6.66031976556078 32.5004213246534 -0.108333333333333 -0.511666666666667 0.215758554299629 0.000562286773087671 -1.40141290961675 -7.21774690145829 Q86V48 LUZP1 Q86V48.S690.p_LUZP1 Q86V48_S690s _1_1_690_690 Q86V48 Q86V48|Q86V48-3 Leucine zipper protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15486.15486.4 18.27 14.92 4.185 4 1 1 0 786.4351 3062.7453 S690s TMT10 673 (K) LVNTTITPEPEPKPQPNsREK (A) LVNT(0.0)T(0.0)IT(0.0)PEPEPKPQPNS(0.99)REK K:TMT10,s:Phosphorylated S LUZP1 120843.3 2 12 507.1 289.34 HUMAN 1 -6.6603 -32.5004 EPKRKSLTFTGGAKG-p Q8NHQ8;T131-p EPKRKSLTFTGGAKG 0.556241781856351 0.00785957634304923 -0.103666666666667 -0.65 4.70371046339971 30.0180495807039 -0.103666666666667 -0.65 0.338554782923304 0.000995852554958517 -1.04947061934401 -6.42742112877611 Q8NHQ8 RASSF8 Q8NHQ8.T131.p_RASSF8 Q8NHQ8_T131t _1_1_131_131 Q8NHQ8 Q8NHQ8|Q8NHQ8-2 Ras association domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17363.17363.2 12.03 12.03 1.238 3 1 1 0 710.3887 1339.7986 T131t TMT10 129 (K) SLtFTGGAK (G) S(0.0)LT(0.99)FT(0.0)GGAK K:TMT10,t:Phosphorylated T RASSF8 48554.3 1 2 6370.1 12.03 HUMAN 1 -4.7037 -30.018 EPKSKVSSPIEKVSP-p Q06190;S562-p EPKSKVSSPIEKVSP 0.0201057751218311 0.0010212605030329 -1.36033333333333 -1.40833333333333 39.5361745358829 51.6706478140977 -1.36033333333333 -1.40833333333333 0.000111271142277111 6.8066781950405e-06 -9.94732019588477 -16.8671379057794 Q06190 PPP2R3A Q06190.S562.p_PPP2R3A Q06190_S562s _1_1_562_562 Q06190 Q06190 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10017.10017.3 10 6.39 1.412 3 1 1 0 581.3408 1662.0405 S562s TMT10 558 (K) SKVSsPIEK (V) S(0.0)KVS(0.0)S(0.99)PIEK K:TMT10,s:Phosphorylated S PPP2R3A 131701.6 3 4 2307.1 88.72 HUMAN 1 -39.5362 -51.6706 EPLAETESESEAELA-p Q8NC44;S281-p EPLAETESESEAELA 0.911888053863514 0.595215852056009 0.0163333333333333 -0.0521666666666667 0.779719102368304 3.05096361792677 0.0163333333333333 -0.0521666666666667 0.835657066005167 0.495340271903284 0.217672351095574 -0.730641156723431 Q8NC44 FAM134A Q8NC44.S281.p_FAM134A Q8NC44_T279tS281s_2_2_279_281 Q8NC44 Q8NC44 Reticulophagy regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32424.32424.5 15.78 15.78 1.209 4 2 2 0 752.7468 3599.8005 T279t S281s TMT10 267 (K) NAPPGGDEPLAEtEsESEAELAGFSPVVDVK (K) NAPPGGDEPLAET(0.99)ES(0.99)ES(0.0)EAELAGFS(0.0)PVVDVK K:TMT10,t:Phosphorylated T,s:Phosphorylated S RETREG2 58171.3 13 7 1304.1 156.18 HUMAN 2 0.7797 -3.051 EPLAGQESPLPLATR-p Q9C0C2;S601-p EPLAGQESPLPLATR 0.534068838376807 0.676048027995285 0.187666666666667 -0.091 5.04435825325057 2.32273656892635 0.187666666666667 -0.091 0.31301429712622 0.585768944479403 1.11218082262071 -0.579073408662665 Q9C0C2 TNKS1BP1 Q9C0C2.S601.p_TNKS1BP1 Q9C0C2_S601s _1_1_601_601 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20671.20671.3 22.91 22.91 6.734 4 1 1 0 799.0649 2315.2081 S601s TMT10 590 (R) YESQEPLAGQEsPLPLATR (E) Y(0.0)ES(0.0)QEPLAGQES(0.99)PLPLAT(0.0)R s:Phosphorylated S TNKS1BP1 182819.3 7 19 4.1 2105.7 HUMAN 1 5.0444 -2.3227 EPLDLKLSITKLRAA-p Q9BZE0;S13-p EPLDLKLSITKLRAA 0.0949352610946194 0.0581916842834025 -0.388333333333333 -0.245333333333333 21.6874664491332 16.4566741113872 -0.388333333333333 -0.245333333333333 0.00678036939782999 0.0226116674083037 -4.25082443431804 -3.15406707952626 Q9BZE0 GLIS2 Q9BZE0.S13.p_GLIS2 Q9BZE0_S13s_1_1_13_13 Q9BZE0 Q9BZE0 Zinc finger protein GLIS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25574.25574.3 12.87 12.87 1.136 3 1 1 0 812.7636 2340.3249 M1m S13s Acetyl 1 (-) mHSLDEPLDLKLsITK (L) M(1.0)HS(0.0)LDEPLDLKLS(0.99)IT(0.0)K K:TMT10,m:Oxidized methionine,s:Phosphorylated S GLIS2 56486.5 2 1 1864.1 110.54 HUMAN 1 -21.6875 -16.4567 EPLDLTKSLNDLGLR-p Q53SF7;S242-p EPLDLTKSLNDLGLR 0.696763497782915 0.0438948444406822 -0.057 -0.274333333333333 2.94938048254746 18.1856440264998 -0.057 -0.274333333333333 0.507063035234524 0.0151857273226265 -0.710112017714565 -3.4970337166517 Q53SF7 COBLL1 Q53SF7.S242.p_COBLL1 Q53SF7_S242s _1_1_242_242 Q53SF7 A0A0D9SG04|Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4|A0A0B4J1Z0 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27730.27730.3 11.21 7.6 11.213 2 1 1 0 763.3806 2208.1644 S242s TMT10 242 (K) sLNDLGLRELYAMDVNR (E) S(0.99)LNDLGLRELY(0.0)AMDVNR s:Phosphorylated S COBLL1 132526.1 2 3 163.1 494.83 HUMAN 1 -2.9494 -18.1856 EPLNLNASDSESEEL-p Q96ST2;S80-p EPLNLNASDSESEEL 0.238535570822241 0.0665607083904215 0.184333333333333 0.441666666666667 11.9065760899203 15.6514100221262 0.184333333333333 0.441666666666667 0.0644677318779318 0.0272181747323768 2.31577469247806 2.99947746382664 Q96ST2 IWS1 Q96ST2.S80.p_IWS1 Q96ST2_S69sS80sS82s_3_3_69_82 Q96ST2 Q96ST2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12737.12737.4 13.17 13.17 1.149 5 3 3 0 875.8538 3260.4889 S69s S80s S82s TMT10 63 (K) GHHVTDsENDEPLNLNAsDsESEELHR (Q) GHHVT(0.0)DS(0.99)ENDEPLNLNAS(0.99)DS(0.99)ES(0.0)EELHR s:Phosphorylated S IWS1 92010 2 20 230.1 422.87 HUMAN 1 11.9066 15.6514 EPLRRRASSASVPAV-p Q9BZ23;S168-p EPLRRRASSASVPAV 0.915554291176027 0.476327770301314 -0.018 -0.071 0.750280743579985 4.29596961396964 -0.018 -0.071 0.841340752593683 0.371880185228377 -0.210010015526854 -0.973124423484245 Q9BZ23 PANK2 Q9BZ23.S168.p_PANK2 Q9BZ23_S168s _1_1_168_168 Q9BZ23 Q9BZ23|Q9BZ23-4|Q9BZ23-3|V9GYZ0 Pantothenate kinase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5724.5724.3 16.14 16.14 1.209 5 1 1 0 713.7006 2059.1206 S168s TMT10 166 (R) RAsSASVPAVGASAEGTRR (D) RAS(0.99)S(0.0)AS(0.0)VPAVGAS(0.0)AEGT(0.0)RR s:Phosphorylated S PANK2 63307.1 12 2 1896.1 108.52 HUMAN 1 -0.7503 -4.296 EPLSDSESEDERPRA-p O14617-5;S636-p EPLSDSESEDERPRA 0.693977037937363 0.423077558653268 0.057 0.081 2.97583673361391 4.97405625911256 0.057 0.081 0.503983509747828 0.318122490729836 0.715500179959693 1.0990804540845 O14617 AP3D1 O14617.5.S636.p_AP3D1 O14617-5_S632sS634sS636s_3_3_632_636 O14617-5 O14617-5|O14617-2|O14617-4|O14617-3 Isoform 5 of AP-3 complex subunit delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35265.35265.4 17.85 17.85 99 3 3 3 0 998.4641 3750.9227 S632s S634s S636s TMT10 614 (K) KVPVPEGLDLDAWINEPLsDsEsEDERPR (A) KVPVPEGLDLDAWINEPLS(1.0)DS(1.0)ES(1.0)EDERPR K:TMT10,s:Phosphorylated S AP3D1 137789.5 8 14 513.1 286.98 HUMAN 1 2.9758 4.9741 EPLSRTGSQEGTSME-p Q8IV36;S593-p EPLSRTGSQEGTSME 0.168744734800559 0.0168119752343378 -0.235333333333333 -0.417333333333333 15.4141184620704 24.4886446556162 -0.235333333333333 -0.417333333333333 0.0287467103975319 0.00355742321160512 -2.95648631625589 -4.90945629476879 Q8IV36 HID1 Q8IV36.S593.p_HID1 Q8IV36_S593s _1_1_593_593 Q8IV36 Q8IV36|Q8IV36-2|Q8IV36-3 Protein HID1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12200.12200.2 18.91 13.02 2.188 6 1 1 0 1449.2051 2817.4453 S593s TMT10 591 (R) TGsQEGTSMEGSRPAAPAEPGTLK (T) T(0.0)GS(0.99)QEGT(0.0)S(0.0)MEGS(0.0)RPAAPAEPGT(0.0)LK K:TMT10,s:Phosphorylated S HID1 89370.5 13 5 589.1 264.44 HUMAN 1 -15.4141 -24.4886 EPLTRARSEEMGRIV-p P40818;S641-p EPLTRARSEEMGRIV 0.165786533997947 0.0860101260452251 0.326333333333333 -0.241666666666667 15.6081233749041 14.1031572375005 0.326333333333333 -0.241666666666667 0.0274908179919199 0.0388762419423874 2.99330239071323 -2.71023769834801 P40818 USP8 P40818.S641.p_USP8 P40818_S641s _1_1_641_641 P40818 P40818|P40818-2 Ubiquitin carboxyl-terminal hydrolase 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3888.3888.3 11.11 11.11 99 1 1 1 0 415.5268 1164.5993 S641s TMT10 639 (R) ARsEEMGR (I) ARS(1.0)EEMGR s:Phosphorylated S USP8 128490.8 1 7 788.1 224.97 HUMAN 1 15.6081 -14.1032 EPLVDGCSGGGRTRK-p Q7Z2K6;S44-p EPLVDGCSGGGRTRK 0.619956161074258 0.762471227820131 0.067 -0.0516666666666667 3.8602206521728 1.62784185804863 0.067 -0.0516666666666667 0.411128832334691 0.687409950157423 0.890314585786365 -0.424665084167639 Q7Z2K6 ERMP1 Q7Z2K6.S44.p_ERMP1 Q7Z2K6_S44s _1_1_44_44 Q7Z2K6 Q7Z2K6|E7ER77 Endoplasmic reticulum metallopeptidase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9857.9857.2 12.27 12.27 99 1 1 1 0 856.3901 1631.8009 S44s TMT10 35 (R) AQEPLVDGCsGGGR (T) AQEPLVDGCS(1.0)GGGR C:Carbamidomethylation,s:Phosphorylated S ERMP1 101085.2 2 1 6338.1 12.27 HUMAN 1 3.8602 -1.6278 EPMDADDSNNCTGQN-p O43513;S194-p EPMDADDSNNCTGQN 0.300973278728137 0.196635194216746 0.148 0.129 9.79210493775325 9.29140451440288 0.148 0.129 0.10490338598637 0.117722519568428 1.94561358114011 1.85812665799749 O43513 MED7 O43513.S194.p_MED7 O43513_S194s _1_1_194_194 O43513 O43513 Mediator of RNA polymerase II transcription subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6569.6569.4 23.38 23.38 2.447 3 1 1 0 771.8448 3004.3889 S194s TMT10 184 (R) VKTEPMDADDsNNCTGQNEHQR (E) VKT(0.0)EPMDADDS(0.99)NNCT(0.0)GQNEHQR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MED7 27473 3 1 5063.1 23.38 HUMAN 1 9.7921 9.2914 EPMEWRRSYGRAPKM-p P48553;S51-p EPMEWRRSYGRAPKM 0.0746534951971481 0.0113414405459896 -0.626 -0.632333333333333 24.1326864094021 27.2368188684183 -0.626 -0.632333333333334 0.00386128056466608 0.00188937477654486 -4.82741387702506 -5.6256739743117 P48553 TRAPPC10 P48553.S51.p_TRAPPC10 P48553_S51s _1_1_51_51 P48553 P48553|P48553-2|F8WE24 Trafficking protein particle complex subunit 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5612.5612.3 9.3 9.3 9.303 2 1 1 0 439.5757 1236.7465 S51s TMT10 51 (R) sYGRAPK (M) S(0.99)Y(0.0)GRAPK K:TMT10,s:Phosphorylated S TRAPPC10 143898 1 1 2631.1 75.89 HUMAN 1 -24.1327 -27.2368 EPPADVWTPPARASA-p Q14258;T91-p EPPADVWTPPARASA 0.781043211966689 0.907630799134866 0.0393333333333333 -0.0163333333333333 2.06172919581452 0.588949997975058 0.0393333333333333 -0.0163333333333333 0.622052558132591 0.873182453851625 0.522429426897391 -0.167319073199229 Q14258 TRIM25 Q14258.T91.p_TRIM25 Q14258_T91t _1_1_91_91 Q14258 Q14258 E3 ubiquitin/ISG15 ligase TRIM25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36743.36743.4 25.06 22.24 15.316 2 1 1 0 929.7199 3635.8842 T91t TMT10 66 (K) NTVLCNVVEQFLQADLAREPPADVWtPPAR (A) NT(0.0)VLCNVVEQFLQADLAREPPADVWT(0.99)PPAR C:Carbamidomethylation,t:Phosphorylated T TRIM25 72626.7 4 1 2037.1 101.35 HUMAN 1 2.0617 -0.5889 EPPAHAPSPGKFGER-p Q06330;S18-p EPPAHAPSPGKFGER 0.596901987159087 0.704931512535284 0.158 -0.0406666666666666 4.13757518613068 2.08615166807923 0.158 -0.0406666666666666 0.385693643444577 0.618564274077426 0.943337544499205 -0.527735274635002 Q06330 RBPJ Q06330.S18.p_RBPJ Q06330_S18s _1_1_18_18 Q06330 Q06330 Recombining binding protein suppressor of hairless HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12444.12444.4 12.44 12.44 1.104 3 1 1 0 908.4391 3550.7789 S18s Acetyl 1 (-) MDHTEGSPAEEPPAHAPsPGKFGERPPPK (R) MDHT(0.0)EGS(0.0)PAEEPPAHAPS(0.99)PGKFGERPPPK K:TMT10,s:Phosphorylated S RBPJ 56377.8 2 1 5059.1 23.44 HUMAN 1 4.1376 -2.0862 EPPAPASSPEAASPT-p Q92766;S1135-p EPPAPASSPEAASPT 0.254658962170373 0.751199828908856 -0.225 0.0383333333333334 11.3037329366642 1.71634818006126 -0.225 0.0383333333333334 0.0740673328941335 0.673542775176322 -2.20940878049521 0.444977819148262 Q92766 RREB1 Q92766.S1135.p_RREB1 Q92766_S1134sS1135sS1140s_3_3_1134_1140 Q92766 Q92766 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12796.12796.4 11.4 11.4 2.795 8 3 3 0 906.4177 3382.7581 S1134s S1135s S1140s TMT10 1125 (K) ESSEPPAPAssPEAAsPTEQGPAGTSKK (R) ES(0.0)S(0.0)EPPAPAS(0.99)S(0.99)PEAAS(0.99)PT(0.0)EQGPAGT(0.0)S(0.0)KK K:TMT10,s:Phosphorylated S RREB1 184269.8 1 35 179.1 480.48 HUMAN 1 -11.3037 1.7163 EPPDARQSPDTFSLM-p O15055;S77-p EPPDARQSPDTFSLM 0.186064438940775 0.264534255948735 -0.258666666666667 0.204 14.3566495206257 7.60661094917089 -0.258666666666667 0.204 0.0366720381659113 0.173515751325783 -2.75863839472602 1.56636287577003 O15055 PER2 O15055.S77.p_PER2 O15055_S77s _1_1_77_77 O15055 O15055|O15055-2 Period circadian protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26467.26467.3 9.26 9.26 2.35 3 1 1 0 631.9814 1813.9592 S77s TMT10 76 (R) QsPDTFSLMMAK (S) QS(0.99)PDT(0.0)FS(0.0)LMMAK K:TMT10,s:Phosphorylated S PER2 138402.8 2 1 1527.1 133.98 HUMAN 1 -14.3566 7.6066 EPPDHQYYNDFPGKE-p P29353-7;Y240-p EPPDHQYYNDFPGKE 0.72370254925658 0.874067257969815 0.0603333333333333 0.0163333333333333 2.65813236775313 0.82266717668455 0.0603333333333333 0.0163333333333333 0.542234021622265 0.82743384731114 0.650076610862035 0.228763045875068 P29353 SHC1 P29353.7.Y240.p_SHC1 P29353-7_Y239yY240y_2_2_239_240 P29353-7 P29353-6|P29353-7|P29353-2|P29353-3 Isoform 7 of SHC-transforming protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28720.28720.5 11.2 11.2 1.701 3 2 2 0 1006.8404 4869.2125 Y239y Y240y N241n TMT10 219 (R) MAGFDGSAWDEEEEEPPDHQyynDFPGKEPPLGGVVDMR (L) MAGFDGS(0.0)AWDEEEEEPPDHQY(0.99)Y(0.99)N(1.0)DFPGKEPPLGGVVDMR K:TMT10,y:Phosphorylated Y,n:Deamidated SHC1 52137.1 1 6 2336.1 87.32 HUMAN 1 2.6581 0.8227 EPPEPKKSRRCVLL_-p P60953;S185-p EPPEPKKSRRCVLL_ 0.456329906764675 0.130332427127905 -0.102333333333333 0.188333333333333 6.28390087878049 11.6631577899263 -0.102333333333333 0.188333333333333 0.235293490354509 0.0681842740545463 -1.33498463042686 2.27163049935632 P60953 CDC42 P60953.S185.p_CDC42 P60953_S185s _1_1_185_185 P60953 P60953 Cell division control protein 42 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31462.31462.4 12.37 10.23 99 1 1 1 0 748.6678 2911.686 S185s TMT10 167 (K) NVFDEAILAALEPPEPKKsR (R) NVFDEAILAALEPPEPKKS(1.0)R K:TMT10,s:Phosphorylated S CDC42 21600.5 1 3 4748.1 27.1 HUMAN 1 -6.2839 11.6632 EPPEPVPSPIIPILP-p Q8NEZ4-3;S4091-p EPPEPVPSPIIPILP 0.806716002014836 0.12612132022912 -0.0583333333333334 0.212666666666667 1.79536886290491 11.856857464314 -0.0583333333333334 0.212666666666667 0.66139836000742 0.0652100080122597 -0.462992510602025 2.30583616165477 Q8NEZ4 KMT2C Q8NEZ4.3.S4091.p_KMT2C Q8NEZ4-3_S4091s _1_1_4091_4091 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34240.34240.5 21.45 21.45 7.65 5 1 1 0 771.0319 3771.1803 S4091s TMT10 4075 (R) YPDLSLVKEEPPEPVPsPIIPILPSTAGK (S) Y(0.0)PDLS(0.0)LVKEEPPEPVPS(0.99)PIIPILPS(0.0)T(0.0)AGK K:TMT10,s:Phosphorylated S KMT2C 554869.1 3 22 88.1 626.31 HUMAN 1 -1.7954 11.8569 EPPKKRTSLSPAEIL-p A1A5D9;S349-p EPPKKRTSLSPAEIL 0.100942488788594 0.0808369700683631 -0.350666666666667 0.207333333333333 21.0696953391147 14.4867328859575 -0.350666666666667 0.207333333333333 0.00781682638297163 0.0355898953840893 -4.11237259563239 2.780991240317 A1A5D9 CCDC64B A1A5D9.S349.p_CCDC64B A1A5D9_S349s _1_1_349_349 A1A5D9 A1A5D9|A1A5D9-2 BICD family-like cargo adapter 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27270.27270.2 10.14 10.14 1.588 3 1 1 0 927.9961 1775.0203 S349s TMT10 348 (R) TsLSPAEILEEK (E) T(0.0)S(0.99)LS(0.0)PAEILEEK K:TMT10,s:Phosphorylated S BICDL2 56890 8 5 1427.1 143.65 HUMAN 1 -21.0697 14.4867 EPPKSVPSQEKRKIP-p Q9Y6M7-13;S428-p EPPKSVPSQEKRKIP 0.594983954089987 0.00575422933881225 0.0883333333333333 -0.556666666666667 4.1592494550523 32.4071631198877 0.0883333333333333 -0.556666666666667 0.383773563263519 0.000574491606655076 0.947450478929743 -7.1866715456257 Q9Y6M7 SLC4A7 Q9Y6M7.13.S428.p_SLC4A7 Q9Y6M7-13_S428s _1_1_428_428 Q9Y6M7-13 A0A0A0MST8|Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-9|Q9Y6M7-2|Q9Y6M7-3 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4531.4531.2 8.08 2.51 2.548 2 1 1 0 734.8998 1388.8262 S428s TMT10 425 (K) SVPsQEKR (K) S(0.0)VPS(0.99)QEKR K:TMT10,s:Phosphorylated S SLC4A7 128884.6 3 10 207.1 445.25 HUMAN 1 4.1592 -32.4072 EPPPADDSPAEPEPR-p Q9UMN6;S687-p EPPPADDSPAEPEPR 0.405906564884755 0.904648818257745 0.119 0.0186666666666667 7.2292363719284 0.60681300196884 0.119 0.0186666666666667 0.189267638220026 0.869598335516143 1.50108317643198 0.172102574125455 Q9UMN6 KMT2B Q9UMN6.S687.p_KMT2B Q9UMN6_S687s _1_1_687_687 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29614.29614.4 22.39 22.39 6.653 4 1 1 0 968.4697 3790.8901 S687s TMT10 661 (K) IYESVLTPPPLGAPEAPEPEPPPADDsPAEPEPR (A) IY(0.0)ES(0.0)VLT(0.0)PPPLGAPEAPEPEPPPADDS(0.99)PAEPEPR s:Phosphorylated S KMT2B 297845.7 1 7 388.1 332.76 HUMAN 1 7.2292 0.6068 EPPPGRVSPAAAQLA-p O14686-3;S4362-p EPPPGRVSPAAAQLA 0.962553763055712 0.297645746920115 -0.00766666666666667 0.164333333333333 0.320720841689204 6.94715213004359 -0.00766666666666667 0.164333333333333 0.928812209796985 0.201969033398497 -0.0935772250261813 1.45136131958995 O14686 KMT2D O14686.3.S4362.p_KMT2D O14686-3_S4362s _1_1_4362_4362 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32976.32976.3 24.89 24.89 18.291 3 1 1 0 686.374 1977.1421 S4362s TMT10 4361 (R) VsPAAAQLADTLFSK (G) VS(0.99)PAAAQLADT(0.0)LFS(0.0)K K:TMT10,s:Phosphorylated S KMT2D 600227.3 3 39 17.1 1042.08 HUMAN 1 -0.3207 6.9472 EPPRLNASPAAREEA-p Q9UGU0;S574-p EPPRLNASPAAREEA 0.22320926423064 0.439623607690392 0.227666666666667 0.0896666666666667 12.5218527142476 4.75437133681342 0.227666666666667 0.0896666666666667 0.055951885802743 0.334628453505478 2.42525364680912 1.05864175384054 Q9UGU0 TCF20 Q9UGU0.S574.p_TCF20 Q9UGU0_S574s _1_1_574_574 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9617.9617.4 15.83 13.12 2.256 5 1 1 0 914.71 3575.8567 S574s TMT10 556 (K) AGSSPAQGAQNEPPRLNAsPAAREEATSPGAK (D) AGS(0.0)S(0.0)PAQGAQNEPPRLNAS(0.99)PAAREEAT(0.0)S(0.0)PGAK K:TMT10,s:Phosphorylated S TCF20 213250.7 5 9 197.1 457.96 HUMAN 1 12.5219 4.7544 EPPSPPQSPRVEEAS-p Q00613;S307-p EPPSPPQSPRVEEAS 0.73500348566583 0.0836513181261303 0.0481666666666667 0.2235 2.53236573734991 14.2652477684465 0.0481666666666667 0.2235 0.558166061465248 0.0374520179753291 0.623717770909236 2.74006815884825 Q00613 HSF1 Q00613.S307.p_HSF1 Q00613_S303sS307s_2_2_303_307 Q00613 Q00613|E9PMQ6|Q00613-2 Heat shock factor protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.35617.35824.5 21.72 18.47 3.614 9 2 2 0 974.9092 4710.5718 S303s S307s TMT10 297 (R) VKEEPPsPPQsPRVEEASPGRPSSVDTLLSPTALIDSILR (E) VKEEPPS(0.99)PPQS(0.99)PRVEEAS(0.0)PGRPS(0.0)S(0.0)VDT(0.0)LLS(0.0)PT(0.0)ALIDS(0.0)ILR K:TMT10,s:Phosphorylated S HSF1 57544.7 11 7 1960.1 105.12 HUMAN 2 2.5324 14.2652 EPPVLELSPGAKAQL-p P29375;S1438-p EPPVLELSPGAKAQL 0.373935912464191 0.063344122419986 -0.137666666666667 -0.236333333333333 7.90917642544626 15.9552500777051 -0.137666666666667 -0.236333333333333 0.161838691142645 0.0253790284291603 -1.61940110452333 -3.05744964099707 P29375 KDM5A P29375.S1438.p_KDM5A P29375_S1438s _1_1_1438_1438 P29375 P29375|P29375-2 Lysine-specific demethylase 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27107.27107.3 12.9 12.9 7.081 2 1 1 0 659.0356 1895.1254 S1438s TMT10 1429 (R) SLEPPVLELsPGAK (A) S(0.0)LEPPVLELS(0.99)PGAK K:TMT10,s:Phosphorylated S KDM5A 194944.7 1 7 446.1 309.57 HUMAN 1 -7.9092 -15.9553 EPQALGLSPSWRLTG-p Q99611;S46-p EPQALGLSPSWRLTG 0.412465008190457 0.0226699346331302 0.122666666666667 0.335 7.09489580690206 22.4547256636878 0.122666666666667 0.335 0.195213756789208 0.00568234284803126 1.47761421336995 4.42189419116646 Q99611 SEPHS2 Q99611.S46.p_SEPHS2 Q99611_S46s _1_1_46_46 Q99611 Q99611 Selenide, water dikinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26188.26188.4 13.64 12.42 2.317 5 1 1 0 662.8286 2568.3197 S46s TMT10 31 (R) SFSNYRPFEPQALGLsPSWR (L) S(0.0)FS(0.0)NY(0.0)RPFEPQALGLS(0.99)PS(0.0)WR s:Phosphorylated S SEPHS2 47747 2 2 3602.1 47.29 HUMAN 1 7.0949 22.4547 EPQDCRVSPGGGSKE-p Q6NSZ9;S267-p EPQDCRVSPGGGSKE 0.112070266823435 0.258449517528879 0.287333333333333 0.116666666666667 19.8572975333923 7.74150992001385 0.287333333333333 0.116666666666667 0.0103340425799239 0.168208914421496 3.84839159579264 1.58979804507788 Q6NSZ9 ZSCAN25 Q6NSZ9.S267.p_ZSCAN25 Q6NSZ9_S267s _1_1_267_267 Q6NSZ9 Q6NSZ9|Q6NSZ9-3 Zinc finger and SCAN domain-containing protein 25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27936.27936.5 14.09 14.09 1.156 4 1 1 0 1021.4759 5023.3854 S267s TMT10 234 (K) DMALAFPEEEWRHVTPAQIDCFGEYVEPQDCRVsPGGGSK (E) DMALAFPEEEWRHVT(0.0)PAQIDCFGEY(0.0)VEPQDCRVS(0.99)PGGGS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZSCAN25 62614.4 1 79 240.66 415.72 HUMAN 1 19.8573 7.7415 EPQELLQSQDFVGEK-p O95260;S169-p EPQELLQSQDFVGEK 0.438869804422212 0.477275786262942 -0.113666666666667 0.087 6.58788578499715 4.28386349971479 -0.113666666666667 0.087 0.219387268774505 0.372918260730231 -1.38866388135955 0.970843041716296 O95260 ATE1 O95260.S169.p_ATE1 O95260_S169s _1_1_169_169 O95260 O95260|O95260-2|F5GXE4|B4E107|B4DK25 Arginyl-tRNA--protein transferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20329.20329.4 7.71 8.84 99 1 1 1 0 693.6183 2691.4808 S169s TMT10 160 (K) KEEPQELLQsQDFVGEK (L) KEEPQELLQS(1.0)QDFVGEK K:TMT10,s:Phosphorylated S ATE1 60002 1 2 4763.1 26.94 HUMAN 1 -6.5879 4.2839 EPQKNESSNASEEEA-p Q9H6Z4-3;S173-p EPQKNESSNASEEEA 0.883958612667082 0.0035390166930334 -0.0473333333333333 0.801333333333333 1.05631898495794 36.592501550588 -0.0473333333333334 0.801333333333333 0.784093947496013 0.000219154223614536 -0.287946395552462 8.69937279735394 Q9H6Z4 RANBP3 Q9H6Z4.3.S173.p_RANBP3 Q9H6Z4-3_S172sS173sS176s_3_3_172_176 Q9H6Z4-3 Q9H6Z4|Q9H6Z4-3 Isoform 3 of Ran-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21924.21924.5 18.65 18.65 18.649 5 3 3 0 968.4241 4598.2168 S172s S173s S176s TMT10 151 (R) SPSEAADEVCALEEKEPQKNEssNAsEEEACEK (K) S(0.0)PS(0.0)EAADEVCALEEKEPQKNES(0.99)S(0.99)NAS(0.99)EEEACEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RANBP3 53752.1 1 20 444.1 311.24 HUMAN 1 -1.0563 36.5925 EPQLRAPSPDPDLVQ-p Q8WXX7;S319-p EPQLRAPSPDPDLVQ 0.53706412572523 0.968675141143769 0.084 -0.00733333333333334 4.99087540703113 0.195991413610532 0.084 -0.00733333333333335 0.316892863797593 0.955874461731935 1.10238570297243 -0.0579365492188269 Q8WXX7 AUTS2 Q8WXX7.S319.p_AUTS2 Q8WXX7_S319s _1_1_319_319 Q8WXX7 Q8WXX7|Q8WXX7-2|A0A087WVB5 Autism susceptibility gene 2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12612.12612.2 10.45 10.45 99 1 1 1 0 752.3757 1423.7743 S319s TMT10 317 (R) APsPDPDLVQR (T) APS(1.0)PDPDLVQR s:Phosphorylated S AUTS2 139379 1 3 684.1 243.98 HUMAN 1 4.9909 -0.196 EPQPEEGSPAGGQKG-p Q9Y6K1;S105-p EPQPEEGSPAGGQKG 0.380643803112374 0.856395016829733 0.120666666666667 -0.021 7.75343616183289 0.948957608822335 0.120666666666667 -0.021 0.167747626447999 0.803719007221579 1.59235704127045 -0.260999981777786 Q9Y6K1 DNMT3A Q9Y6K1.S105.p_DNMT3A Q9Y6K1_S105s _1_1_105_105 Q9Y6K1 Q9Y6K1|F8WE91|Q9Y6K1-3 DNA (cytosine-5)-methyltransferase 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4960.4960.3 19.47 19.47 11.836 2 1 1 0 731.3632 2112.1086 S105s TMT10 96 (K) RSEPQPEEGsPAGGQK (G) RS(0.0)EPQPEEGS(0.99)PAGGQK K:TMT10,s:Phosphorylated S DNMT3A 103454.1 2 1 2836.1 68.54 HUMAN 1 7.7534 -0.949 EPQRENASPAPGTTA-p P46379-3;S1003-p EPQRENASPAPGTTA 0.890988784685547 0.430787819024074 0.0346666666666667 0.146333333333333 0.97982439842033 4.87284699803814 0.0346666666666667 0.146333333333333 0.798026953844344 0.325623170208259 0.268809905309727 1.08049062763749 P46379 BAG6 P46379.3.S1003.p_BAG6 P46379-3_S1003s _1_1_1003_1003 P46379-3 P46379-3|A0A0G2JK23|P46379-2|A0A024RCR6|P46379-5|A0A0G2JL47 Isoform 3 of Large proline-rich protein BAG6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9357.9357.3 18.47 14.09 3.711 5 1 1 0 931.7624 2713.3049 S1003s TMT10 993 (R) ASPEPQRENAsPAPGTTAEEAMSR (G) AS(0.0)PEPQRENAS(0.99)PAPGT(0.0)T(0.0)AEEAMS(0.0)R s:Phosphorylated S BAG6 122796.4 6 6 590.1 264.42 HUMAN 1 0.9798 4.8728 EPQSQGNSQVLLDAP-p Q9NUQ8;S83-p EPQSQGNSQVLLDAP 0.440425964111899 0.0623005375692206 0.114333333333333 -0.296333333333333 6.56038091280764 16.0428945889748 0.114333333333333 -0.296333333333333 0.220781108091546 0.0248719903825183 1.38381878694742 -3.07425135365067 Q9NUQ8 ABCF3 Q9NUQ8.S83.p_ABCF3 Q9NUQ8_S83s _1_1_83_83 Q9NUQ8 Q9NUQ8|F8WCU6 ATP-binding cassette sub-family F member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28980.28980.4 13.16 13.16 2.309 3 1 1 0 719.3882 2794.5715 S83s TMT10 74 (R) LAEPQSQGNsQVLLDAPIQLSK (I) LAEPQS(0.0)QGNS(0.99)QVLLDAPIQLS(0.0)K K:TMT10,s:Phosphorylated S ABCF3 80142.6 2 1 2013.1 102.38 HUMAN 1 6.5604 -16.0429 EPRDSRGSPGGSLGG-p Q9Y283-2;S661-p EPRDSRGSPGGSLGG 0.336940767668124 0.781985415408876 0.220666666666667 -0.0283333333333333 8.8080296465231 1.47847154218666 0.220666666666667 -0.0283333333333333 0.131582167278728 0.711463862485699 1.77513250888932 -0.389895229021087 Q9Y283 INVS Q9Y283.2.S661.p_INVS Q9Y283-2_S661s _1_1_661_661 Q9Y283-2 Q9Y283|Q9Y283-2 Isoform 2 of Inversin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12055.12055.3 16.02 11.07 2.119 3 1 1 0 675.6888 1945.0867 S661s TMT10 657 (R) DSRGsPGGSLGGALQK (E) DS(0.0)RGS(0.99)PGGS(0.0)LGGALQK K:TMT10,s:Phosphorylated S INVS 100418.1 1 2 3865.1 41.56 HUMAN 1 8.808 -1.4785 EPREHGHSYSNRKYE-p O00418;S462-p EPREHGHSYSNRKYE 0.158297715435374 0.397975061411914 0.229 -0.0823333333333333 16.0539221077333 5.31999672962267 0.229 -0.0823333333333333 0.0248089160336703 0.293765186410717 3.07855074625877 -1.16214141531828 O00418 EEF2K O00418.S462.p_EEF2K O00418_S462s _1_1_462_462 O00418 O00418 Eukaryotic elongation factor 2 kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.2642.2642.2 7.37 7.37 1.16 3 1 1 0 698.304 1315.6341 S462s TMT10 458 (R) EHGHsYSNR (K) EHGHS(0.99)Y(0.0)S(0.0)NR s:Phosphorylated S EEF2K 82713.2 1 5 995.1 190.99 HUMAN 1 16.0539 -5.32 EPRERVPSVAEAPQL-p Q63ZY3-2;S548-p EPRERVPSVAEAPQL 0.0520154613962689 0.0333176113345642 -0.591333333333333 -0.269666666666667 27.9819324611593 19.9147916271355 -0.591333333333333 -0.269666666666667 0.00159150040649934 0.0101981368914944 -5.84085791551819 -3.85709792049395 Q63ZY3 KANK2 Q63ZY3.2.S548.p_KANK2 Q63ZY3-2_S548s _1_1_548_548 Q63ZY3-2 Q63ZY3-2|Q63ZY3-3 Isoform 2 of KN motif and ankyrin repeat domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13707.13707.4 13.06 13.06 8.376 2 1 1 0 665.1188 2577.4877 S548s TMT10 544 (R) ERVPsVAEAPQLRPAGTAAAK (T) ERVPS(0.99)VAEAPQLRPAGT(0.0)AAAK K:TMT10,s:Phosphorylated S KANK2 92718.4 1 7 1442.1 141.99 HUMAN 1 -27.9819 -19.9148 EPRGTPGSPSGTQEP-p Q5SXM2;S1224-p EPRGTPGSPSGTQEP 0.322888488875434 0.637306398405543 0.149 -0.0936666666666666 9.19313132258973 2.66289146843832 0.149 -0.0936666666666666 0.120416740613412 0.541640154323443 1.84180010696178 -0.650983036697885 Q5SXM2 SNAPC4 Q5SXM2.S1224.p_SNAPC4 Q5SXM2_S1224s _1_1_1224_1224 Q5SXM2 Q5SXM2 snRNA-activating protein complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5145.5145.3 11.04 11.04 1.364 4 1 1 0 527.2487 1499.7652 S1224s TMT10 1220 (R) GTPGsPSGTQEPR (G) GT(0.0)PGS(0.99)PS(0.0)GT(0.0)QEPR s:Phosphorylated S SNAPC4 160228.7 2 6 1272.1 159.49 HUMAN 1 9.1931 -2.6629 EPRKPSPSESPEPWK-p Q96JM3;S284-p EPRKPSPSESPEPWK 0.23918495849275 0.0107783492702187 0.199666666666667 -0.394 11.8754209804496 27.5756449649661 0.199666666666667 -0.394 0.0649318687253121 0.00174757371329527 2.3102570690351 -5.71898828608046 Q96JM3 CHAMP1 Q96JM3.S284.p_CHAMP1 Q96JM3_S284sS286sS297s_3_3_284_297 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24609.24609.4 7.21 7.21 1.238 4 3 3 0 844.1617 3133.7289 S284s S286s S297s TMT10 280 (R) KPSPsEsPEPWKPFPAVsPEPR (R) KPS(0.0)PS(0.99)ES(0.99)PEPWKPFPAVS(0.99)PEPR K:TMT10,s:Phosphorylated S CHAMP1 90067.4 6 53 25.1 950.05 HUMAN 1 11.8754 -27.5756 EPRKQAGSLASLSDA-p O95684;S279-p EPRKQAGSLASLSDA 0.768966469812523 0.671340011925614 0.0536666666666666 0.068 2.18922852365793 2.36586736569051 0.0536666666666666 0.068 0.604055923731963 0.579980328251855 0.550311893197436 0.588310461737438 O95684 FGFR1OP O95684.S279.p_FGFR1OP O95684_S279s _1_1_279_279 O95684 O95684|O95684-2|A0A087WV25|O95684-3 FGFR1 oncogene partner HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22684.22684.3 11.17 7.54 1.141 3 1 1 0 665.0313 1913.1108 S279s TMT10 276 (K) QAGsLASLSDAPPLK (S) QAGS(0.99)LAS(0.0)LS(0.0)DAPPLK K:TMT10,s:Phosphorylated S FGFR1OP 43178.2 1 6 1485.1 137.99 HUMAN 1 2.1892 2.3659 EPRLLASSPALPSSG-p Q9NYZ3;S168-p EPRLLASSPALPSSG 0.902056813320628 0.0317805608871883 -0.0183333333333334 -0.487 0.879570124560778 20.2263119348944 -0.0183333333333334 -0.487 0.816663202705431 0.00949224210276543 -0.243390930546472 -3.92396358746128 Q9NYZ3 GTSE1 Q9NYZ3.S168.p_GTSE1 Q9NYZ3_S168s _1_1_168_168 Q9NYZ3 Q9NYZ3 G2 and S phase-expressed protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18864.18864.2 12.78 9.15 1.137 4 1 1 0 917.9852 1754.9962 S168s TMT10 164 (R) LLASsPALPSSGAQAR (L) LLAS(0.0)S(0.99)PALPS(0.0)S(0.0)GAQAR s:Phosphorylated S GTSE1 77156.9 2 4 271.1 394.28 HUMAN 1 -0.8796 -20.2263 EPRPRTRSNPEGAED-p Q9NWV8;S29-p EPRPRTRSNPEGAED 0.405906564884755 0.84730728917872 -0.149333333333333 0.045 7.22993206876722 1.01033055026707 -0.149333333333333 0.045 0.189237321843166 0.792441013905337 -1.5012046191464 0.276440467494232 Q9NWV8 BABAM1 Q9NWV8.S29.p_BABAM1 Q9NWV8_S29s _1_1_29_29 Q9NWV8 Q9NWV8|J3KQS6|Q9NWV8-3|M0QXG9 BRISC and BRCA1-A complex member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5276.5276.2 22.32 17.11 20.835 3 1 1 0 1019.4541 1957.9322 S29s Hydrogen 29 (R) sNPEGAEDRAVGAQASVGSR (S) S(0.99)NPEGAEDRAVGAQAS(0.0)VGS(0.0)R s:Phosphorylated S BABAM1 37072.9 6 2 1373.1 148.88 HUMAN 1 -7.2299 1.0103 EPRRNLQSKTELTPE-p P46939;S2644-p EPRRNLQSKTELTPE 0.590040864524148 0.756747433317578 0.093 -0.0423333333333333 4.22133369496305 1.67411421994685 0.093 -0.0423333333333333 0.378326384880684 0.680124748009756 0.959208289993327 -0.435310885128842 P46939 UTRN P46939.S2644.p_UTRN P46939_S2644s _1_1_2644_2644 P46939 P46939-2|P46939-4|Q5T097 Utrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12444.12444.3 10.08 10.08 1.117 3 1 1 0 695.0367 2003.1173 S2644s TMT10 2641 (R) NLQsKTELTPEER (A) NLQS(0.99)KT(0.0)ELT(0.0)PEER K:TMT10,s:Phosphorylated S UTRN 396684.3 1 14 527.1 282.18 HUMAN 1 4.2213 -1.6741 EPRSGTNSPPPPFSD-p Q9UKT5;S12-p EPRSGTNSPPPPFSD 0.964995630930211 0.080556827652968 0.00733333333333333 0.226666666666667 0.29945945147013 14.5099086167895 0.00733333333333332 0.226666666666667 0.933370466361423 0.035400478988954 0.0875665533233081 2.78528435213491 Q9UKT5 FBXO4 Q9UKT5.S12.p_FBXO4 Q9UKT5_S12s _1_1_12_12 Q9UKT5 Q9UKT5|Q9UKT5-2|D6RAJ6|D6REP2|D6RAU6 F-box only protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20666.21077.2 17.81 15.09 2.903 4 1 1 0 955.9371 1830.8972 S12s TMT10 8 (R) SGTNsPPPPFSDWGR (L) S(0.0)GT(0.0)NS(0.99)PPPPFS(0.0)DWGR s:Phosphorylated S FBXO4 44534.6 13 1 4208.1 35.41 HUMAN 1 0.2995 14.5099 EPRSTPESGDSDKES-p Q6GQQ9;S464-p EPRSTPESGDSDKES 0.977771106621815 0.0723227372729605 0.00599999999999998 0.237333333333333 0.193000865911271 15.1585139708748 0.00599999999999998 0.237333333333333 0.956532902658076 0.0304893806889629 0.0570761225751956 2.90631268532603 Q6GQQ9 OTUD7B Q6GQQ9.S464.p_OTUD7B Q6GQQ9_S464s _1_1_464_464 Q6GQQ9 Q6GQQ9|Q6GQQ9-2 OTU domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6190.6190.3 18.26 18.26 2.677 10 1 1 0 965.7687 2815.323 S464s TMT10 460 (R) STPEsGDSDKESVGSSSTSNEGGR (R) S(0.0)T(0.0)PES(0.99)GDS(0.0)DKES(0.0)VGS(0.0)S(0.0)S(0.0)T(0.0)S(0.0)NEGGR K:TMT10,s:Phosphorylated S OTUD7B 93208.9 1 4 1645.1 123.96 HUMAN 1 0.193 15.1585 EPRTETDSVGTPQSN-p Q9H0H5;S274-p EPRTETDSVGTPQSN 0.150283451076775 0.222121599780717 0.237333333333333 0.147333333333333 16.594848010609 8.60550765941225 0.237333333333333 0.147333333333333 0.0219035848237567 0.137863479093163 3.18325708844373 1.73947827210974 Q9H0H5 RACGAP1 Q9H0H5.S274.p_RACGAP1 Q9H0H5_S274s _1_1_274_274 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7255.7471.2 13.12 13.12 1.119 5 1 1 0 973.4297 1865.8861 S274s TMT10 270 (R) TETDsVGTPQSNGGMR (L) T(0.0)ET(0.0)DS(0.99)VGT(0.0)PQS(0.0)NGGMR s:Phosphorylated S RACGAP1 71709.9 1 10 574.1 268.64 HUMAN 1 16.5948 8.6055 EPRTLNPSPAGWFVQ-p Q8N1F8;S415-p EPRTLNPSPAGWFVQ 0.744043857023488 0.252468947622686 -0.0556666666666667 -0.120666666666667 2.4386069210183 7.87272385409518 -0.0556666666666667 -0.120666666666667 0.570347192235085 0.163202803421831 -0.603883805851682 -1.61257101007132 Q8N1F8 STK11IP Q8N1F8.S415.p_STK11IP Q8N1F8_S415s _1_1_415_415 Q8N1F8 Q8N1F8|C9JQV3|Q8N1F8-2 Serine/threonine-protein kinase 11-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33487.33690.3 25.9 19.07 4.044 4 1 1 0 1027.5011 3000.5239 S415s TMT10 411 (R) TLNPsPAGWFVQQHPELELMSSFR (E) T(0.0)LNPS(0.99)PAGWFVQQHPELELMS(0.0)S(0.0)FR s:Phosphorylated S STK11IP 122825.3 6 4 813.1 220.97 HUMAN 1 -2.4386 -7.8727 EPRTRQDSPKPSGSG-p Q5T1R4;S2382-p EPRTRQDSPKPSGSG 0.336940767668124 0.0165776631913041 0.180333333333333 0.376 8.80706828206977 24.5869568815694 0.180333333333333 0.376 0.131611297840044 0.00347779766729219 1.77496609839903 4.93389466459855 Q5T1R4 HIVEP3 Q5T1R4.S2382.p_HIVEP3 Q5T1R4_S2382s _1_1_2382_2382 Q5T1R4 Q5T1R4|Q5T1R4-2 Transcription factor HIVEP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3491.3491.3 10.21 10.21 1.271 4 1 1 0 713.031 2057.114 S2382s TMT10 2378 (R) TRQDsPKPSGSGEPR (A) T(0.0)RQDS(0.99)PKPS(0.0)GS(0.0)GEPR K:TMT10,s:Phosphorylated S HIVEP3 261285.6 2 41 465.1 303.46 HUMAN 1 8.8071 24.587 EPSEDEESQGLPTMA-p Q9H4L7-2;S132-p EPSEDEESQGLPTMA 0.191404434921086 0.978753186403754 0.678333333333333 -0.00366666666666662 14.0152137724887 0.133578365224419 0.678333333333333 -0.00366666666666663 0.0396715000974505 0.969710645832709 2.6957121914904 -0.039755795890599 Q9H4L7 SMARCAD1 Q9H4L7.2.S132.p_SMARCAD1 Q9H4L7-2_S124sS127sS132s_3_3_124_132 Q9H4L7-2 Q9H4L7-2|D6RAY8 Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27464.27464.3 10.22 10.22 1.483 6 3 3 0 1231.2255 3451.7667 S124s S127s S132s TMT10 114 (K) TFNKDTVIIVsEPsEDEEsQGLPTMAR (R) T(0.0)FNKDT(0.0)VIIVS(0.99)EPS(0.99)EDEES(0.99)QGLPT(0.0)MAR K:TMT10,s:Phosphorylated S SMARCAD1 118399.2 1 18 250.1 406.83 HUMAN 1 14.0152 -0.1336 EPSENEASKELEPEM-p Q9H307;S422-p EPSENEASKELEPEM 0.862029975440239 0.00580120755760381 -0.043 0.498333333333333 1.26157579386718 32.3372026802286 -0.0430000000000001 0.498333333333333 0.747898083972736 0.000583821026217084 -0.338263437693875 7.16343301752293 Q9H307 PNN Q9H307.S422.p_PNN Q9H307_S413sS417sS422s_3_3_413_422 Q9H307 Q9H307|Q9H307-2 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26266.26266.5 15.52 8.69 1.119 4 3 3 0 1115.1096 5330.6175 S413s S417s N419n S422s TMT10 398 (K) HVIADQEVMETNRVEsVEPsEnEAsKELEPEMEFEIEPDK (E) HVIADQEVMET(0.0)N(0.0)RVES(0.99)VEPS(0.99)EN(0.99)EAS(0.99)KELEPEMEFEIEPDK K:TMT10,s:Phosphorylated S,n:Deamidated PNN 81726.4 1 15 180.1 480.36 HUMAN 1 -1.2616 32.3372 EPSGRRGSDELTVPR-p A0A087X165;S1021-p EPSGRRGSDELTVPR 0.777914463108527 0.0183445546607262 0.0463333333333333 0.529666666666667 2.09575702720552 23.8984995483963 0.0463333333333333 0.529666666666667 0.617197697573663 0.00407521048645206 0.529905219763749 4.76449387328984 A0A087X165 NotFound A0A087X165.S1021.p_NotFound A0A087X165_S1021s _1_1_1021_1021 A0A087X165 A0A087X165|Q9C0H9-5 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8133.8133.3 11.97 5.64 4.38 2 1 1 0 480.2466 1358.7589 S1021s TMT10 1019 (R) RGsDELTVPR (Y) RGS(0.99)DELT(0.0)VPR s:Phosphorylated S SRCIN1 130745.5 3 28 98.1 603.22 HUMAN 1 2.0958 23.8985 EPSKSAESPTSPVTS-p Q02952;S283-p EPSKSAESPTSPVTS 0.18947715453248 0.0132589498636546 -0.229666666666667 -0.395333333333333 14.1365784546368 26.1221515941787 -0.229666666666667 -0.395333333333333 0.0385782172572995 0.00244222032113426 -2.71802914308068 -5.32667312862064 Q02952 AKAP12 Q02952.S283.p_AKAP12 Q02952_S283s _1_1_283_283 Q02952 Q02952|Q02952-2|Q02952-3 A-kinase anchor protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15082.15082.3 9.45 9.45 1.508 9 1 1 0 903.4691 2628.4335 S283s TMT10 280 (K) SAEsPTSPVTSETGSTFKK (F) S(0.0)AES(0.99)PT(0.0)S(0.0)PVT(0.0)S(0.0)ET(0.0)GS(0.0)T(0.0)FKK K:TMT10,s:Phosphorylated S AKAP12 192048.9 1 1 2207.1 93.46 HUMAN 1 -14.1366 -26.1222 EPSPLNLSHHTPDHQ-p P0C7T5;S366-p EPSPLNLSHHTPDHQ 0.0428424262829993 0.00320981770772267 0.544333333333333 0.640333333333333 30.4476534035153 37.3578672674432 0.544333333333333 0.640333333333334 0.00090205840958712 0.000183744045175157 6.56948779080487 9.00415862657114 P0C7T5 ATXN1L P0C7T5.S366.p_ATXN1L P0C7T5_S366s _1_1_366_366 P0C7T5 P0C7T5 Ataxin-1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7115.7115.5 19.49 19.49 1.111 3 1 1 0 581.4904 2823.4538 S366s TMT10 357 (R) KEEPSPLNLsHHTPDHQGEGR (G) KEEPS(0.0)PLNLS(0.99)HHT(0.0)PDHQGEGR K:TMT10,s:Phosphorylated S ATXN1L 73818.4 1 7 1155.1 171.78 HUMAN 1 30.4477 37.3579 EPSQLLKSAIVHLIN-p P14923;S125-p EPSQLLKSAIVHLIN 0.929939245487504 0.933945702281343 -0.0143333333333333 -0.0123333333333333 0.625167786580479 0.419598227874915 -0.0143333333333333 -0.0123333333333333 0.865930868091349 0.907904517857168 -0.177018806613785 -0.121190891244364 P14923 JUP P14923.S125.p_JUP P14923_S125s _1_1_125_125 P14923 P14923 Junction plakoglobin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25386.25386.3 20.73 16.75 14.872 3 1 1 0 780.0598 2258.1978 S125s TMT10 125 (K) sAIVHLINYQDDAELATR (A) S(0.99)AIVHLINY(0.0)QDDAELAT(0.0)R s:Phosphorylated S JUP 82485 1 5 957.1 195.02 HUMAN 1 -0.6252 -0.4196 EPSQNDISPKTKSLR-p Q9NR30;S89-p EPSQNDISPKTKSLR 0.524029289666196 0.00232985334139993 -0.107666666666667 -0.718333333333333 5.19170062389965 40.4921014166174 -0.107666666666667 -0.718333333333334 0.302572837192416 8.92873345408226e-05 -1.13907501845433 -10.3549355186538 Q9NR30 DDX21 Q9NR30.S89.p_DDX21 Q9NR30_S89s _1_1_89_89 Q9NR30 Q9NR30|Q9NR30-2 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7610.7610.5 18.46 18.46 3.073 3 1 1 0 591.7443 2874.7273 S89s TMT10 79 (K) KKEEPSQNDIsPKTK (S) KKEEPS(0.0)QNDIS(0.99)PKT(0.0)K K:TMT10,s:Phosphorylated S DDX21 87856.3 42 17 103.1 590.75 HUMAN 1 -5.1917 -40.4921 EPSTIARSLPTTVPE-p Q6PKG0;S766-p EPSTIARSLPTTVPE 0.0467983898119534 0.00636741490360708 -0.560333333333333 -0.497666666666667 29.5578448929897 31.6129837969763 -0.560333333333334 -0.497666666666667 0.00110717306208311 0.000689765741149829 -6.29871679409151 -6.92652634209276 Q6PKG0 LARP1 Q6PKG0.S766.p_LARP1 Q6PKG0_S766s _1_1_766_766 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15979.15979.2 14.19 9.08 1.574 5 1 1 0 885.4376 1689.9009 S766s TMT10 766 (R) sLPTTVPESPNYR (N) S(0.99)LPT(0.0)T(0.0)VPES(0.0)PNY(0.0)R s:Phosphorylated S LARP1 123907.4 9 53 28.1 931.95 HUMAN 1 -29.5578 -31.613 EPSYLEDSPEENLFE-p Q6P4F7;S638-p EPSYLEDSPEENLFE 0.260301692650828 0.986684549534204 0.239 0.00266666666666669 11.0894659948135 0.0875953665406239 0.239 0.00266666666666668 0.0778132223703208 0.980032466758203 2.171790473972 0.0262034359447275 Q6P4F7 ARHGAP11A Q6P4F7.S638.p_ARHGAP11A Q6P4F7_S638s_1_1_638_638 Q6P4F7 Q6P4F7|Q6P4F7-3 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33908.33908.3 17.35 17.35 1.124 7 1 1 0 1217.9316 3570.7991 S638s N642n TMT10 629 (K) LTEPSYLEDsPEEnLFETNDLTIVESK (E) LT(0.0)EPS(0.0)Y(0.0)LEDS(0.99)PEEN(0.99)LFET(0.0)N(0.0)DLT(0.0)IVES(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated ARHGAP11A 114948.2 3 9 414.1 321.53 HUMAN 1 11.0895 0.0876 EPTAPALSPRSSFAS-p Q96IF1;S119-p EPTAPALSPRSSFAS 0.531868120079942 0.2131035427946 -0.102333333333333 -0.318666666666667 5.0743329154608 8.83382451978918 -0.102333333333333 -0.318666666666667 0.310861335496124 0.130802952793606 -1.11766272427984 -1.77897049811226 Q96IF1 AJUBA Q96IF1.S119.p_AJUBA Q96IF1_S119s _1_1_119_119 Q96IF1 Q96IF1 LIM domain-containing protein ajuba HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16359.16359.3 13.49 12.29 5.591 2 1 1 0 487.5961 1380.8048 S119s TMT10 111 (R) LEPTAPALsPR (S) LEPT(0.0)APALS(0.99)PR s:Phosphorylated S AJUBA 58758.7 2 4 1286.1 158.19 HUMAN 1 -5.0743 -8.8338 EPTAPLVTPPPKGGG-p Q9Y2W6;T252-p EPTAPLVTPPPKGGG 0.590160043138345 0.0474557203885791 -0.111333333333333 -0.298 4.22017474410137 17.7065848752293 -0.111333333333333 -0.298 0.378427357887895 0.0169567068652379 -0.958989116002374 -3.40039849039525 Q9Y2W6 TDRKH Q9Y2W6.T252.p_TDRKH Q9Y2W6_T252t _1_1_252_252 Q9Y2W6 Q9Y2W6 Tudor and KH domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22830.22830.4 17.27 17.99 2.345 7 1 1 0 906.223 3541.9213 T252t TMT10 239 (K) NTSSSMEPTAPLVtPPPKGGGDMAVVVSK (E) NT(0.0)S(0.0)S(0.0)S(0.0)MEPT(0.0)APLVT(0.99)PPPKGGGDMAVVVS(0.0)K K:TMT10,t:Phosphorylated T TDRKH 62444.3 4 1 2676.1 74.3 HUMAN 1 -4.2202 -17.7066 EPTKRMLSFQGLAEL-p O15294;S20-p EPTKRMLSFQGLAEL 0.463575474177616 0.539125015859076 0.168 -0.0736666666666666 6.15887339798673 3.60975930843088 0.168 -0.0736666666666666 0.242165716662192 0.435536010980748 1.31281658320746 -0.841626225889501 O15294 OGT O15294.S20.p_OGT O15294_S20s _1_1_20_20 O15294 O15294 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28579.28579.3 19.01 19.01 99 1 1 1 0 594.6373 1701.9308 S20s TMT10 18 (R) MLsFQGLAELAHR (E) MLS(1.0)FQGLAELAHR s:Phosphorylated S OGT 118177.7 2 1 3740.1 44.09 HUMAN 1 6.1589 -3.6098 EPTKTRKSPSSDSWT-p Q8N6T3;S343-p EPTKTRKSPSSDSWT 0.864679832642579 0.607286158415171 0.026 0.0673333333333334 1.22870866354891 2.94103046196077 0.026 0.0673333333333334 0.753579600691819 0.508038884533762 0.330303007122245 0.708310961056325 Q8N6T3 ARFGAP1 Q8N6T3.S343.p_ARFGAP1 Q8N6T3_S343s _1_1_343_343 Q8N6T3 Q8N6T3|Q8N6T3-5|F8VWH9|Q8N6T3-4 ADP-ribosylation factor GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8366.8366.3 15.06 11.16 1.612 8 1 1 0 751.3198 2171.9825 S343s TMT10 343 (K) sPSSDSWTCADTSTERR (S) S(0.99)PS(0.0)S(0.0)DS(0.0)WT(0.0)CADT(0.0)S(0.0)T(0.0)ERR C:Carbamidomethylation,s:Phosphorylated S ARFGAP1 45009.4 3 12 243.1 413.25 HUMAN 1 1.2287 2.941 EPTMKTLSDDLDEAA-p Q9H0A0;S934-p EPTMKTLSDDLDEAA 0.259311710735691 0.459279424057962 -0.258 -0.0746666666666667 11.1322221082805 4.50470599303568 -0.258 -0.0746666666666667 0.0770509129996353 0.354429123471761 -2.17928987500728 -1.01226864054645 Q9H0A0 NAT10 Q9H0A0.S934.p_NAT10 Q9H0A0_S934s _1_1_934_934 Q9H0A0 Q9H0A0|Q9H0A0-2|A0A087WV29 RNA cytidine acetyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19496.19496.2 14.69 14.69 3.044 2 1 1 0 858.4296 1635.8842 S934s TMT10 932 (K) TLsDDLDEAAK (E) T(0.0)LS(0.99)DDLDEAAK K:TMT10,s:Phosphorylated S NAT10 116640.6 2 4 3187.1 58.19 HUMAN 1 -11.1322 -4.5047 EPTPSIASDISLPIA-p A0FGR8-6;S779-p EPTPSIASDISLPIA 0.468420595180194 0.514165156540718 -0.185333333333333 -0.0833333333333333 6.08250569456507 3.87684713787503 -0.185333333333333 -0.0833333333333333 0.246461694772359 0.409557879929104 -1.29924797808213 -0.893366498696144 A0FGR8 ESYT2 A0FGR8.6.S779.p_ESYT2 A0FGR8-6_S779s _1_1_779_779 A0FGR8-6 A0FGR8-6|A0A087WXU3|A0FGR8-2|A0FGR8-5 Isoform 6 of Extended synaptotagmin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30782.30782.3 19.17 19.17 2.368 5 1 1 0 816.427 2367.2969 S779s TMT10 772 (K) EPTPSIAsDISLPIATQELR (Q) EPT(0.0)PS(0.0)IAS(0.99)DIS(0.0)LPIAT(0.0)QELR s:Phosphorylated S ESYT2 105219.8 3 5 1886.1 109.02 HUMAN 1 -6.0825 -3.8768 EPTPSTVSTPSPSAD-p O95782;S652-p EPTPSTVSTPSPSAD 0.671242801288777 0.0602812221753402 0.0613333333333333 0.222333333333333 3.24254024494613 16.249380505868 0.0613333333333333 0.222333333333333 0.473964676059806 0.0237171199153384 0.769258771058153 3.11397860405449 O95782 AP2A1 O95782.S652.p_AP2A1 O95782_S652sT653tS655s_3_3_652_655 O95782 O95782|O95782-2 AP-2 complex subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21228.21228.5 21.51 21.51 1.357 10 3 3 0 1101.939 5265.7377 S652s T653t S655s TMT10 619 (R) KKGPGAGSALDDGRRDPSSNDINGGMEPTPSTVstPsPSADLLGLR (A) KKGPGAGS(0.0)ALDDGRRDPS(0.0)S(0.0)NDINGGMEPT(0.0)PS(0.0)T(0.0)VS(0.99)T(0.99)PS(0.99)PS(0.0)ADLLGLR K:TMT10,s:Phosphorylated S,t:Phosphorylated T AP2A1 108628 12 5 1590.1 129.37 HUMAN 1 3.2425 16.2494 EPTPVLGSGAAAAGR-p P42166;S79-p EPTPVLGSGAAAAGR 0.466387383086786 0.961933608104928 0.117 0.00500000000000002 6.11569185878719 0.240901210364978 0.117 0.00500000000000003 0.244585560462832 0.946040826781625 1.30514702205861 0.0708713282830877 P42166 TMPO P42166.S79.p_TMPO P42166_S79s _1_1_79_79 P42166 P42166|P42167|G5E972|P42167-2|P42167-3 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16843.16843.4 18.93 16.68 5.096 4 1 1 0 720.5909 2799.3747 S79s TMT10 61 (K) GPPDFSSDEEREPTPVLGsGAAAAGR (S) GPPDFS(0.0)S(0.0)DEEREPT(0.0)PVLGS(0.99)GAAAAGR s:Phosphorylated S TMPO 76061.2 2 4 123.1 546.19 HUMAN 1 6.1157 0.2409 EPVAGHESPKIPYEK-p D6REX3;S799-p EPVAGHESPKIPYEK 0.405570780072225 0.0738686929815987 0.112333333333333 0.267666666666667 7.23931983391312 15.0201773965119 0.112333333333333 0.267666666666667 0.188828705818414 0.0314761974047438 1.50284328149581 2.8803536641831 D6REX3 NotFound D6REX3.S799.p_NotFound D6REX3_S799s _1_1_799_799 D6REX3 D6REX3|O94979-8|O94979-2|O94979-9|O94979-4|O94979-10|O94979-3|O94979-6|O94979-7|H7BXG7|D6RHZ5 Protein transport protein Sec31A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12393.12393.4 20.21 20.21 6.85 2 1 1 0 676.864 2624.4651 S799s TMT10 789 (R) AQGEPVAGHEsPKIPYEK (Q) AQGEPVAGHES(0.99)PKIPY(0.0)EK K:TMT10,s:Phosphorylated S SEC31A 137193.7 20 6 665.1 250.42 HUMAN 1 7.2393 15.0202 EPVALAPSPVIPRLT-p Q5VWG9;S755-p EPVALAPSPVIPRLT 0.688148440533523 0.82053112982257 0.0556666666666667 -0.0236666666666667 3.04791407219255 1.20228976249614 0.0556666666666667 -0.0236666666666667 0.49568821399021 0.75817773005329 0.730127496346467 -0.32384546519818 Q5VWG9 TAF3 Q5VWG9.S755.p_TAF3 Q5VWG9_S755s _1_1_755_755 Q5VWG9 Q5VWG9 Transcription initiation factor TFIID subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24689.24689.3 22.46 22.46 99 1 1 1 0 742.1126 2144.3571 S755s TMT10 745 (K) IKVEPVALAPsPVIPR (L) IKVEPVALAPS(1.0)PVIPR K:TMT10,s:Phosphorylated S TAF3 104321.6 3 12 699.1 240.69 HUMAN 1 3.0479 -1.2023 EPVARAPSVRSLSLS-p Q9Y446-2;S295-p EPVARAPSVRSLSLS 0.158312848211182 0.167724042792932 0.273333333333333 -0.259 16.0401179936619 10.2018128327019 0.273333333333333 -0.259 0.0248878969932525 0.0954594036054823 3.07589714991819 -2.01596123225712 Q9Y446 PKP3 Q9Y446.2.S295.p_PKP3 Q9Y446-2_S295s _1_1_295_295 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20038.20038.3 17.59 17.59 99 1 1 1 0 756.7527 2188.2764 S295s TMT10 277 (R) GVGGAVPGAVLEPVARAPsVR (S) GVGGAVPGAVLEPVARAPS(1.0)VR s:Phosphorylated S PKP3 89109.7 4 10 454.1 307.47 HUMAN 1 16.0401 -10.2018 EPVGTQVSMEEIQNE-p F5H2X7;S544-p EPVGTQVSMEEIQNE 0.434272682849394 0.105544071805219 0.122333333333333 0.246666666666667 6.67261525408772 12.9015657363493 0.122333333333333 0.246666666666667 0.215148575316448 0.0512676518419623 1.40357554556644 2.49198973906063 F5H2X7 CIZ1 F5H2X7.S544.p_CIZ1 F5H2X7_S544s _1_1_544_544 F5H2X7 F5H2X7|Q9ULV3|Q5SYW2|Q9ULV3-2|Q9ULV3-4 Cip1-interacting zinc finger protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25584.25584.3 21.28 21.28 2.575 4 1 1 0 1253.2209 3677.6931 S544s TMT10 534 (K) TLPEPVGTQVsMEEIQNESACGLDVGECENR (A) T(0.0)LPEPVGT(0.0)QVS(0.99)MEEIQNES(0.0)ACGLDVGECENR C:Carbamidomethylation,s:Phosphorylated S CIZ1 107380.6 3 8 497.1 292.98 HUMAN 1 6.6726 12.9016 EPVKEESSELEQPFA-p Q15424;S235-p EPVKEESSELEQPFA 0.0930004911854097 0.0237986460494067 0.533 -0.818 21.9346478090355 22.1340584616425 0.533 -0.818 0.00640523722713056 0.00611778420438574 4.30700090268743 -4.34801849653184 Q15424 SAFB Q15424.S235.p_SAFB Q15424_S235s _1_1_235_235 Q15424 Q14151|Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29314.29314.4 18.09 18.09 1.203 7 1 1 0 1190.3473 4678.4013 S235s TMT10 217 (K) ILDILGETCKSEPVKEESsELEQPFAQDTSSVGPDR (K) ILDILGET(0.0)CKS(0.0)EPVKEES(0.0)S(0.99)ELEQPFAQDT(0.0)S(0.0)S(0.0)VGPDR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SAFB 103096.3 1 22 83.1 629.62 HUMAN 1 21.9346 -22.1341 EPVPEEGSEDELPPQ-p Q7Z3C6;S828-p EPVPEEGSEDELPPQ 0.217359173580377 0.606514417558916 0.191 -0.0703333333333333 12.7667884730149 2.94763335890534 0.191 -0.0703333333333333 0.052883617173954 0.507267062702632 2.46912715202305 -0.709657216669036 Q7Z3C6 ATG9A Q7Z3C6.S828.p_ATG9A Q7Z3C6_S828s _1_1_828_828 Q7Z3C6 Q7Z3C6|Q7Z3C6-2 Autophagy-related protein 9A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21780.21780.5 22.69 22.69 6.962 3 1 1 0 883.2407 4332.1937 S828s TMT10 804 (R) LPLGGWAEDGQSASRHPEPVPEEGsEDELPPQVHKV (-) LPLGGWAEDGQS(0.0)AS(0.0)RHPEPVPEEGS(0.99)EDELPPQVHKV K:TMT10,s:Phosphorylated S ATG9A 95415.3 7 6 1664.1 122.57 HUMAN 1 12.7668 -2.9476 EPVPRVLSGDPQNLS-p J3KPT4;S31-p EPVPRVLSGDPQNLS 0.46436373670968 0.0190839081468127 -0.112 -0.389 6.14734562662722 23.6446948013813 -0.112 -0.389 0.24280936732248 0.00432046528439223 -1.31076979315966 -4.7030484497578 J3KPT4 TRABD J3KPT4.S31.p_TRABD J3KPT4_S31s _1_1_31_31 J3KPT4 J3KPT4|Q9H4I3 TraB domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37935.37935.3 23.11 21.92 8.579 2 1 1 0 986.1764 2876.548 S31s TMT10 29 (R) VLsGDPQNLSDVDAFNLLLEMK (L) VLS(0.99)GDPQNLS(0.0)DVDAFNLLLEMK K:TMT10,s:Phosphorylated S TRABD 43034.1 1 1 5089.1 23.11 HUMAN 1 -6.1473 -23.6447 EPVQADESQSPRDRG-p O95049-3;S873-p EPVQADESQSPRDRG 0.64042233505001 0.160306445984648 0.0766666666666667 -0.153333333333333 3.61603291157058 10.4574056927251 0.0766666666666667 -0.153333333333333 0.434907311418782 0.0900035067118437 0.842983456147936 -2.06042520905331 O95049 TJP3 O95049.3.S873.p_TJP3 O95049-3_S873s _1_1_873_873 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4820.4820.3 15.86 12.04 1.152 4 1 1 0 699.6539 2016.9784 S873s TMT10 864 (R) SSEPVQADEsQSPRDR (G) S(0.0)S(0.0)EPVQADES(0.99)QS(0.0)PRDR s:Phosphorylated S TJP3 103593.6 5 21 125.1 544.41 HUMAN 1 3.616 -10.4574 EPVWAIGTGKTATPQ-p P60174;T210-p EPVWAIGTGKTATPQ 0.862721178211236 0.732095642811229 -0.03 0.0383333333333334 1.25121558475649 1.86708975270564 -0.03 0.0383333333333334 0.749684344264516 0.650565494233974 -0.335758035377238 0.479108405790873 P60174 TPI1 P60174.T210.p_TPI1 P60174_T210t _1_1_210_210 P60174 P60174|P60174-1|P60174-4 Triosephosphate isomerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32577.32577.3 20.19 20.19 7.951 2 1 1 0 714.4007 2061.2149 T210t TMT10 198 (K) VVLAYEPVWAIGtGK (T) VVLAY(0.0)EPVWAIGT(0.99)GK K:TMT10,t:Phosphorylated T TPI1 31075.7 1 5 1065.1 181.63 HUMAN 1 -1.2512 1.8671 EPVYPKGSPQMKGTP-p Q4ADV7;S113-p EPVYPKGSPQMKGTP 0.351871789570093 0.153445471358367 -0.190333333333333 -0.144666666666667 8.42869290253784 10.7050568980081 -0.190333333333333 -0.144666666666667 0.143592153808002 0.0850147555118375 -1.70945829875553 -2.10359522521005 Q4ADV7 RIC1 Q4ADV7.S113.p_RIC1 Q4ADV7_S113s _1_1_113_113 Q4ADV7 Q4ADV7|Q4ADV7-3|Q4ADV7-2 RAB6A-GEF complex partner protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21109.21109.4 13.19 13.19 3.009 4 1 1 0 642.5955 2487.3925 S113s TMT10 103 (K) YLYEPVYPKGsPQMK (G) Y(0.0)LY(0.0)EPVY(0.0)PKGS(0.99)PQMK K:TMT10,s:Phosphorylated S RIC1 160895.7 2 2 1588.1 129.39 HUMAN 1 -8.4287 -10.7051 EPWVERATPT_____-p Q9BTY7;T388-p EPWVERATPT_____ 0.498209980179592 0.575592774769726 0.118666666666667 0.124333333333333 5.57441025250805 3.23429074643341 0.118666666666667 0.124333333333333 0.277050523265648 0.474865835741606 1.20835832711959 0.767497942860062 Q9BTY7 HGH1 Q9BTY7.T388.p_HGH1 Q9BTY7_T388t _1_1_388_388 Q9BTY7 Q9BTY7 Protein HGH1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21310.21310.3 16.06 16.06 1.192 2 1 1 0 635.6512 1824.9693 T388t TMT10 377 (R) ELAPEPWVERAtPT (-) ELAPEPWVERAT(0.99)PT(0.0) t:Phosphorylated T HGH1 42584.9 2 2 3877.1 41.47 HUMAN 1 5.5744 3.2343 EQADLEQTFNPSDPD-p Q9BZZ5;T226-p EQADLEQTFNPSDPD 0.993614071836454 0.329325743693812 -0.00133333333333334 -0.141 0.0586534048019152 6.38680554358262 -0.00133333333333334 -0.141 0.986585343798329 0.229783820332533 -0.0176043783215687 -1.35284787077843 Q9BZZ5 API5 Q9BZZ5.T226.p_API5 Q9BZZ5_T226t _1_1_226_226 Q9BZZ5 Q9BZZ5|Q9BZZ5-6|G3V1C3|Q9BZZ5-2|Q9BZZ5-5|Q9BZZ5-3|Q9BZZ5-1 Apoptosis inhibitor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31096.31096.4 14.84 6.09 2.697 2 1 1 0 857.1502 3345.6106 T226t TMT10 211 (R) QQLVELVAEQADLEQtFNPSDPDCVDR (L) QQLVELVAEQADLEQT(0.99)FNPS(0.0)DPDCVDR C:Carbamidomethylation,t:Phosphorylated T API5 59345.8 1 1 2573.1 78.1 HUMAN 1 -0.0587 -6.3868 EQAGKDSS_______-p Q5VV52-2;S284-p EQAGKDSS_______ 0.224767265517543 0.0719128234737837 0.203 0.247333333333333 12.4479668423543 15.1946372226261 0.203 0.247333333333333 0.0569119302741415 0.0302368313600779 2.41205286449244 2.91310463191876 Q5VV52 ZNF691 Q5VV52.2.S284.p_ZNF691 Q5VV52-2_S284s _1_1_284_284 Q5VV52-2 Q5VV52-3|Q5VV50|Q5VV52-2 Isoform 2 of Zinc finger protein 691 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5759.5759.2 13.41 13.41 1.149 3 1 1 0 884.4379 1687.9015 S284s TMT10 273 (K) THLGEQAGKDSs (-) T(0.0)HLGEQAGKDS(0.0)S(0.99) K:TMT10,s:Phosphorylated S ZNF691 33357.2 2 76 240.48 415.72 HUMAN 1 12.448 15.1946 EQALLSASQEIEMHA-p Q9HAU0-6;S777-p EQALLSASQEIEMHA 0.983028189885502 0.526745858179283 -0.00366666666666667 0.0616666666666667 0.146432814463404 3.74095120627988 -0.00366666666666667 0.0616666666666667 0.96684469482611 0.422576050111201 -0.0435241215932491 0.867136567368902 Q9HAU0 PLEKHA5 Q9HAU0.6.S777.p_PLEKHA5 Q9HAU0-6_S777s_1_1_777_777 Q9HAU0-6 Q9HAU0-6|Q9HAU0-4|Q9HAU0-2|Q9HAU0-8|Q9HAU0-5|A0JP02 Isoform 6 of Pleckstrin homology domain-containing family A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30523.30523.4 14.96 12.41 1.145 5 1 1 0 1059.802 4155.216 S777s N786n TMT10 765 (K) EKYTLEQALLSAsQEIEMHADnPAAIQTVVLQR (D) EKY(0.0)T(0.0)LEQALLS(0.0)AS(0.99)QEIEMHADN(1.0)PAAIQT(0.0)VVLQR K:TMT10,s:Phosphorylated S,n:Deamidated PLEKHA5 147692.6 2 9 374.1 338.83 HUMAN 1 -0.1464 3.741 EQALQTLSPRAIPRN-p Q7Z434;S165-p EQALQTLSPRAIPRN 0.367999212728304 0.21222245746777 -0.133 -0.128666666666667 8.05109395717665 8.85653169346556 -0.133 -0.128666666666667 0.156635646626222 0.130120831739675 -1.6440229142679 -1.78289791623329 Q7Z434 MAVS Q7Z434.S165.p_MAVS Q7Z434_S165s _1_1_165_165 Q7Z434 Q7Z434 Mitochondrial antiviral-signaling protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19476.19476.3 28.55 28.2 1.138 7 1 1 0 1398.342 4113.0487 S165s TMT10 135 (R) EKEPSYPMPVQETQAPESPGENSEQALQTLsPR (A) EKEPS(0.0)Y(0.0)PMPVQET(0.0)QAPES(0.0)PGENS(0.0)EQALQT(0.0)LS(0.99)PR K:TMT10,s:Phosphorylated S MAVS 57097.6 5 3 1410.1 145.44 HUMAN 1 -8.0511 -8.8565 EQAPKTRSLDFPQNE-p Q8NEF9;S367-p EQAPKTRSLDFPQNE 0.986625341798263 0.394052618963842 -0.003 -0.091 0.119934954986076 5.37650726774792 -0.003 -0.091 0.972761792884604 0.289967465939921 -0.0357521930812719 -1.17237700457485 Q8NEF9 SRFBP1 Q8NEF9.S367.p_SRFBP1 Q8NEF9_S367s _1_1_367_367 Q8NEF9 Q8NEF9 Serum response factor-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19153.19153.3 7.51 7.51 99 1 1 1 0 575.6211 1644.8795 S367s Hydrogen 367 (R) sLDFPQNEPQIK (N) S(1.0)LDFPQNEPQIK K:TMT10-Lys-Only,s:Phosphorylated S SRFBP1 48747.1 3 6 1171.1 170.26 HUMAN 1 -0.1199 -5.3765 EQARMEVSQEDDKAL-p O14578-4;S529-p EQARMEVSQEDDKAL 0.82462022231528 0.0263581786161247 -0.0606666666666667 0.304333333333333 1.61512764956173 21.4568461564596 -0.0606666666666667 0.304333333333333 0.689425329009596 0.00715015381262006 -0.421775514315126 4.19452169413184 O14578 CIT O14578.4.S529.p_CIT O14578-4_S529s _1_1_529_529 O14578-4 O14578-4|O14578-3 Isoform 4 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10963.10963.2 10.56 6.09 99 1 1 1 0 809.8754 1538.7772 S529s TMT10 526 (R) MEVsQEDDK (A) MEVS(1.0)QEDDK K:TMT10,s:Phosphorylated S CIT 238656.7 1 9 366.1 342.11 HUMAN 1 -1.6151 21.4568 EQASVPLSPKKGSEA-p P42858;S1199-p EQASVPLSPKKGSEA 0.129811405438849 0.00140014198002876 -0.414333333333333 -0.966666666666667 18.3434754579121 46.1949222719856 -0.414333333333333 -0.966666666666667 0.0146437549993641 2.40163925092777e-05 -3.53211466902692 -13.3023078136606 P42858 HTT P42858.S1199.p_HTT P42858_S1199s _1_1_1199_1199 P42858 P42858 Huntingtin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11748.11748.4 21.82 20.06 9.047 2 1 1 0 695.1462 2697.5957 S1199s TMT10 1185 (K) GKEKEPGEQASVPLsPK (K) GKEKEPGEQAS(0.0)VPLS(0.99)PK K:TMT10,s:Phosphorylated S HTT 351590.8 13 7 343.1 353.16 HUMAN 1 -18.3435 -46.1949 EQDADAGSERGLSGE-p Q6P158;S127-p EQDADAGSERGLSGE 0.602377813619717 0.99428806303828 0.075 -0.000999999999999973 4.06495757161284 0.0346485606525978 0.075 -0.000999999999999941 0.392196977881203 0.992053614854666 0.929526102663912 -0.0104268685258387 Q6P158 DHX57 Q6P158.S127.p_DHX57 Q6P158_S127s _1_1_127_127 Q6P158 Q6P158|Q6P158-2|A0A087WZ11 Putative ATP-dependent RNA helicase DHX57 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16424.16424.3 17.11 13.97 99 1 1 1 0 732.689 2116.0832 S127s TMT10 113 (K) ALLRDLQEQDADAGsER (G) ALLRDLQEQDADAGS(1.0)ER s:Phosphorylated S DHX57 157199 2 1 2406.1 84.87 HUMAN 1 4.065 -0.0346 EQEDRALSPVIPLIP-p O14686-3;S4741-p EQEDRALSPVIPLIP 0.70004138781017 0.0200512850704527 0.055 0.323666666666667 2.90923385577904 23.2692953972858 0.055 0.323666666666667 0.511772109922826 0.0047105374432022 0.701915596711655 4.6131336766991 O14686 KMT2D O14686.3.S4741.p_KMT2D O14686-3_S4741s _1_1_4741_4741 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.31242.31242.2 16.87 16.87 99 1 1 1 0 742.9432 1404.914 S4741s TMT10 4739 (R) ALsPVIPLIPR (A) ALS(1.0)PVIPLIPR s:Phosphorylated S KMT2D 600227.3 9 42 17.1 1042.08 HUMAN 1 2.9092 23.2693 EQEGMEESPQSVGRQ-p Q5T481;S862-p EQEGMEESPQSVGRQ 0.316098233401141 0.0122066483782641 -0.390666666666667 0.657 9.36337144791394 26.7130378332196 -0.390666666666667 0.657 0.11578781410745 0.00213155339777752 -1.87128465390783 5.48367139035484 Q5T481 RBM20 Q5T481.S862.p_RBM20 Q5T481_S862sS865s_2_2_862_865 Q5T481 Q5T481 RNA-binding protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12409.12409.4 12.82 12.82 7.992 3 2 2 0 1025.4645 3938.8951 S862s S865s TMT10 843 (K) ENTMAENEAGKEEQEGMEEsPQsVGRQEK (E) ENT(0.0)MAENEAGKEEQEGMEES(0.99)PQS(0.99)VGRQEK K:TMT10,s:Phosphorylated S RBM20 135496 3 15 522.1 283.33 HUMAN 1 -9.3634 26.713 EQEKGEGSDSKESPK-p Q6PKG0;S215-p EQEKGEGSDSKESPK 0.677569851619576 0.139464505704342 0.0973333333333333 -0.212333333333333 3.16585831905636 11.2719992451296 0.0973333333333333 -0.212333333333333 0.482407629877286 0.074610521487757 0.753903287740368 -2.20281002505678 Q6PKG0 LARP1 Q6PKG0.S215.p_LARP1 Q6PKG0_S215s _1_1_215_215 Q6PKG0 Q6PKG0 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6938.6938.3 11.86 3.9 1.358 2 1 1 0 855.4408 2484.3422 S215s TMT10 205 (K) DMKEQEKGEGsDSK (E) DMKEQEKGEGS(0.99)DS(0.0)K K:TMT10,s:Phosphorylated S LARP1 123907.4 7 36 28.1 931.95 HUMAN 1 3.1659 -11.272 EQEKGIGSEDARKKK-p Q9UEE9;S102-p EQEKGIGSEDARKKK 0.380447781544114 0.00584288757124063 -0.167666666666667 0.500333333333333 7.75762969670049 32.2839219694876 -0.167666666666667 0.500333333333334 0.167585728005409 0.000591027655620709 -1.59308561099877 7.14577710862342 Q9UEE9 CFDP1 Q9UEE9.S102.p_CFDP1 Q9UEE9_S102s _1_1_102_102 Q9UEE9 Q9UEE9|Q9UEE9-2 Craniofacial development protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6069.6069.2 9.46 1.87 99 1 1 1 0 557.2612 1033.5476 S102s TMT10 99 (K) GIGsEDAR (K) GIGS(1.0)EDAR s:Phosphorylated S CFDP1 33592.3 2 1 2807.1 69.95 HUMAN 1 -7.7576 32.2839 EQEKRGPSFPKECCS-p Q86YV5;S306-p EQEKRGPSFPKECCS 0.0691244016116837 0.0651958472657046 -0.589666666666667 -0.436 25.00160838123 15.7791222040907 -0.589666666666667 -0.436 0.0031611067481375 0.0264294289489878 -5.04418414205889 -3.02379324169303 Q86YV5 SGK223 Q86YV5.S306.p_SGK223 Q86YV5_S306s _1_1_306_306 Q86YV5 Q86YV5 Tyrosine-protein kinase PRAG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10166.10166.3 7.27 7.27 99 1 1 1 0 442.9166 1246.7672 S306s TMT10 303 (K) RGPsFPK (E) RGPS(1.0)FPK K:TMT10,s:Phosphorylated S PRAG1 152359.5 1 4 223.1 426.19 HUMAN 1 -25.0016 -15.7791 EQEPDKESGASVDEV-p P50579;S60-p EQEPDKESGASVDEV 0.28850766089035 0.0954163723371658 0.205 0.215 10.1800931339566 13.4961297731449 0.205 0.215 0.0959380057499357 0.0447081832845374 2.01301688889564 2.59937125115148 P50579 METAP2 P50579.S60.p_METAP2 P50579_S60s _1_1_60_60 P50579 P50579|P50579-3|G3V1U3 Methionine aminopeptidase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8989.8989.4 16.57 11.65 1.123 4 1 1 0 817.9125 3188.6638 S60s TMT10 45 (K) SKGPSAAGEQEPDKEsGASVDEVAR (Q) S(0.0)KGPS(0.0)AAGEQEPDKES(0.99)GAS(0.0)VDEVAR K:TMT10,s:Phosphorylated S METAP2 53746.4 2 2 4498.1 30.66 HUMAN 1 10.1801 13.4961 EQEPFPHS_______-p O43716;S136-p EQEPFPHS_______ 0.242767455460076 0.131895871226618 0.209666666666667 0.185 11.7605551344749 11.5984848856711 0.209666666666667 0.185 0.0666721540461261 0.0692072370689007 2.28993437645609 2.26022904312577 O43716 GATC O43716.S136.p_GATC O43716_S136s_1_1_136_136 O43716 O43716 Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33097.33097.3 12.25 12.25 2.898 3 1 1 0 1193.2767 3496.8404 N121n S136s TMT10 110 (R) VVEEYFVAPPGnISLPKLDEQEPFPHs (-) VVEEY(0.0)FVAPPGN(1.0)IS(0.0)LPKLDEQEPFPHS(0.99) K:TMT10,n:Deamidated,s:Phosphorylated S GATC 15199.9 1 1 6341.1 12.25 HUMAN 1 11.7606 11.5985 EQEQRRRSRACDCLV-p Q96SI1;S163-p EQEQRRRSRACDCLV 0.149632101520733 0.703280137856366 0.545666666666667 -0.109666666666667 16.6269090482542 2.10148978389823 0.545666666666667 -0.109666666666667 0.0217424807968708 0.61638352421054 3.18950822798937 -0.531099360930134 Q96SI1 KCTD15 Q96SI1.S163.p_KCTD15 Q96SI1_S163s _1_1_163_163 Q96SI1 Q96SI1 BTB/POZ domain-containing protein KCTD15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8104.8104.3 10.67 10.67 99 1 1 1 0 515.5812 1464.7613 S163s TMT10 163 (R) sRACDCLVVR (V) S(1.0)RACDCLVVR C:Carbamidomethylation,s:Phosphorylated S KCTD15 32283.9 1 5 2985.1 64.05 HUMAN 1 16.6269 -2.1015 EQFLGFGSDEEVRVR-p Q03164-3;S153-p EQFLGFGSDEEVRVR 0.529276501737613 0.602772261359496 -0.0983333333333333 -0.0546666666666666 5.11241277481236 2.98186565716231 -0.0983333333333334 -0.0546666666666666 0.308147552411975 0.503284359717656 -1.12461899158494 -0.716626364374991 Q03164 KMT2A Q03164.3.S153.p_KMT2A Q03164-3_S153s _1_1_153_153 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.26385.26385.3 26.23 26.23 6.26 3 1 1 0 1029.114 3005.3598 S153s TMT10 131 (R) AVFGESGGGGGSGEDEQFLGFGsDEEVR (V) AVFGES(0.0)GGGGGS(0.0)GEDEQFLGFGS(0.99)DEEVR s:Phosphorylated S KMT2A 436608.3 2 2 26.1 936.8 HUMAN 1 -5.1124 -2.9819 EQGDDQDSEKSKPAG-p Q1KMD3;S185-p EQGDDQDSEKSKPAG 0.955130432176283 0.00888933969691268 0.022 0.861333333333333 0.3913159331584 29.0597577075239 0.022 0.861333333333333 0.91383630272259 0.00124172158118828 0.113354543542466 6.14174025660384 Q1KMD3 HNRNPUL2 Q1KMD3.S185.p_HNRNPUL2 Q1KMD3_S185s _1_1_185_185 Q1KMD3 Q1KMD3|H3BQZ7 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11339.11339.3 17.52 13.69 17.52 4 1 1 0 1182.203 3464.6392 S185s TMT10 161 (R) SGDETPGSEVPGDKAAEEQGDDQDsEK (S) S(0.0)GDET(0.0)PGS(0.0)EVPGDKAAEEQGDDQDS(0.99)EK K:TMT10,s:Phosphorylated S HNRNPUL2 85673.7 8 3 294.1 379.87 HUMAN 1 0.3913 29.0598 EQGDVIDSIEANVEN-p O15400;S205-p EQGDVIDSIEANVEN 0.572719143373661 0.114318200687057 -0.0806666666666667 0.218333333333333 4.45536011062593 12.4221031000751 -0.0806666666666667 0.218333333333333 0.35847922247188 0.0572518717827641 -1.00323123546356 2.40618493827051 O15400 STX7 O15400.S205.p_STX7 O15400_S205s_1_1_205_205 O15400 O15400|O15400-2 Syntaxin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32974.32974.5 25.64 19.84 0 2 1 1 0 869.4095 4247.0659 M195m S205s TMT10 191 (K) DLGMmIHEQGDVIDsIEANVENAEVHVQQANQQLSR (A) DLGM(0.50)M(0.50)IHEQGDVIDS(0.99)IEANVENAEVHVQQANQQLS(0.0)R m:Oxidized methionine,s:Phosphorylated S STX7 29929.1 4 12 1215.1 165.8 HUMAN 1 -4.4554 12.4221 EQGERRNSAPESILL-p Q13469;S363-p EQGERRNSAPESILL 0.188663596750432 0.0136416091574513 -0.209333333333333 0.530666666666667 14.2061551340804 25.9207890752398 -0.209333333333333 0.530666666666667 0.0379650946190533 0.00255812105636837 -2.73084803878849 5.27392790621074 Q13469 NFATC2 Q13469.S363.p_NFATC2 Q13469_S363s _1_1_363_363 Q13469 Q13469|Q13469-2|Q13469-4|Q13469-3|Q13469-5 Nuclear factor of activated T-cells, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27930.27930.4 19.93 19.93 1.136 3 1 1 0 611.5939 2363.3851 S363s TMT10 361 (R) RNsAPESILLVPPTWPK (P) RNS(0.99)APES(0.0)ILLVPPT(0.0)WPK K:TMT10,s:Phosphorylated S NFATC2 101056.9 13 8 843.1 214.04 HUMAN 1 -14.2062 25.9208 EQGSGTTTGCGLPSI-p Q15633;T12-p EQGSGTTTGCGLPSI 0.816184721896316 0.161580877945438 0.0393333333333333 0.143 1.69319862675859 10.4091956173906 0.0393333333333333 0.143 0.677142600914145 0.0910081818683076 0.439733245933803 2.05203174249795 Q15633 TARBP2 Q15633.T12.p_TARBP2 Q15633_T12t _1_1_12_12 Q15633 Q15633|F8VP94 RISC-loading complex subunit TARBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.34032.34032.3 11.83 7.91 1.11 6 1 1 0 1067.4808 3120.4663 T12t Acetyl 2 (M) SEEEQGSGTTtGCGLPSIEQMLAANPGK (T) S(0.0)EEEQGS(0.0)GT(0.0)T(0.0)T(0.99)GCGLPS(0.0)IEQMLAANPGK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T TARBP2 39666.2 4 1 2078.1 98.8 HUMAN 1 1.6932 10.4092 EQGVTFPSGDIQEQL-p P49327;S265-p EQGVTFPSGDIQEQL 0.134738301810513 0.81571810270964 -0.289333333333333 -0.023 17.8622897794644 1.23743445606351 -0.289333333333333 -0.023 0.0163595375177472 0.752067037639076 -3.43444886754001 -0.332385999636567 P49327 FASN P49327.S265.p_FASN P49327_S265s _1_1_265_265 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23876.23876.3 15.73 15.73 4.085 2 1 1 0 742.7052 2146.1342 S265s TMT10 258 (K) EQGVTFPsGDIQEQLIR (S) EQGVT(0.0)FPS(0.99)GDIQEQLIR s:Phosphorylated S FASN 276046.1 2 4 175.1 481.87 HUMAN 1 -17.8623 -1.2374 EQHIMGFSPMNMNNK-p Q9UHV7;S848-p EQHIMGFSPMNMNNK 0.408838439850386 0.0755407135921702 0.120666666666667 0.329333333333333 7.1672070186488 14.890853820511 0.120666666666667 0.329333333333333 0.191990304820801 0.0324275858630503 1.4902513487021 2.85615852332641 Q9UHV7 MED13 Q9UHV7.S848.p_MED13 Q9UHV7_S848s _1_1_848_848 Q9UHV7 Q9UHV7 Mediator of RNA polymerase II transcription subunit 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28511.28511.4 15.88 15.88 6.778 4 1 1 0 801.3835 3122.5336 S848s TMT10 833 (K) MYPTPPSLEQHIMGFsPMNMNNK (E) MY(0.0)PT(0.0)PPS(0.0)LEQHIMGFS(0.99)PMNMNNK K:TMT10,s:Phosphorylated S MED13 242830 4 4 1738.1 118.41 HUMAN 1 7.1672 14.8909 EQIIGENSPPDYSEY-p P25490;S247-p EQIIGENSPPDYSEY 0.824817850402609 0.00510537464064734 0.041 0.517 1.61352161271676 33.3604825713757 0.041 0.517 0.689680328159433 0.000461266317568162 0.42140436713143 7.50970474545912 P25490 YY1 P25490.S247.p_YY1 P25490_S247s _1_1_247_247 P25490 P25490 Transcriptional repressor protein YY1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22789.22789.4 29.76 28.93 5.794 6 1 1 0 1023.5009 4011.0148 S247s TMT10 230 (K) KDIDHETVVEEQIIGENsPPDYSEYMTGK (K) KDIDHET(0.0)VVEEQIIGENS(0.99)PPDY(0.0)S(0.0)EY(0.0)MT(0.0)GK K:TMT10,s:Phosphorylated S YY1 45168.2 16 4 1217.1 165.22 HUMAN 1 1.6135 33.3605 EQIIQEIYSQIQSKK-p P29401-2;Y283-p EQIIQEIYSQIQSKK 0.224262912799076 0.149596605408162 0.240666666666667 0.222 12.4729856675767 10.8563502015697 0.240666666666667 0.222 0.05658501472541 0.0821041255201151 2.41652112040206 2.13001579654477 P29401 TKT P29401.2.Y283.p_TKT P29401-2_Y283y _1_1_283_283 P29401-2 P29401-2|A0A0B4J1R6|E9PFF2 Isoform 2 of Transketolase GG20160819_MSz_CCLE_T4D7_pY_Injection_02.48653.48688.3 21.68 18.41 1.559 3 1 1 0 854.446 2481.3423 Y283y TMT10 273 (K) NMAEQIIQEIySQIQSK (K) NMAEQIIQEIY(0.99)S(0.0)QIQS(0.0)K K:TMT10,y:Phosphorylated Y TKT 69497 3 1 154.1 21.68 HUMAN 1 12.473 10.8564 EQISESESEDEENEI-p Q12874;S369-p EQISESESEDEENEI 0.151837827094672 0.476441961999805 -0.373 0.101 16.4832607006789 4.29377124255473 -0.373 0.101 0.02247366640212 0.372068476296406 -3.16154014343695 0.972710236528685 Q12874 SF3A3 Q12874.S369.p_SF3A3 Q12874_S365sS367sS369s_3_3_365_369 Q12874 Q12874 Splicing factor 3A subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19076.19076.4 11.3 7.57 3.127 5 3 3 0 1075.4448 4057.841 S365s S367s S369s N374n TMT10 352 (R) TGEEREEEEEEQIsEsEsEDEEnEIIYNPK (N) T(0.0)GEEREEEEEEQIS(0.99)ES(0.99)ES(0.99)EDEEN(0.99)EIIY(0.0)N(0.0)PK K:TMT10,s:Phosphorylated S,n:Deamidated SF3A3 59190.2 5 7 2105.1 97.51 HUMAN 1 -16.4833 4.2938 EQKEAASSGDDSGRD-p Q9BW71;S301-p EQKEAASSGDDSGRD 0.368151012081381 0.0837241574580962 -0.334 0.721666666666667 8.04633639378632 14.2602733331202 -0.334 0.721666666666667 0.156807330212426 0.0374949403208483 -1.64319780707181 2.73915121095545 Q9BW71 HIRIP3 Q9BW71.S301.p_HIRIP3 Q9BW71_S301s _1_1_301_301 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4070.4070.4 10.52 10.52 1.212 3 1 1 0 585.2726 2258.0959 S301s TMT10 297 (K) EAASsGDDSGRDREPPVQR (K) EAAS(0.0)S(0.99)GDDS(0.0)GRDREPPVQR s:Phosphorylated S HIRIP3 62298.3 1 12 178.1 481.23 HUMAN 1 -8.0463 14.2603 EQKELEKSEKEEDED-p Q8IX12;S685-p EQKELEKSEKEEDED 0.326351385633394 0.369738498542629 -0.265 0.780666666666667 9.10887985103049 5.73041205690222 -0.265 0.780666666666667 0.122775585781937 0.267275280689395 -1.82721227475633 1.23610425142871 Q8IX12 CCAR1 Q8IX12.S685.p_CCAR1 Q8IX12_S685s _1_1_685_685 Q8IX12 Q8IX12|Q8IX12-2 Cell division cycle and apoptosis regulator protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8551.8551.3 8.16 1.03 99 1 1 1 0 543.9741 1549.9404 S685s TMT10 681 (K) ELEKsEK (E) ELEKS(1.0)EK K:TMT10,s:Phosphorylated S CCAR1 133503.3 1 4 1111.1 176.02 HUMAN 1 -9.1089 5.7304 EQKFRMLSQDAPTVK-p O60934;S397-p EQKFRMLSQDAPTVK 0.746527005315183 0.45866001477838 0.0763333333333333 0.0773333333333334 2.41010382668191 4.51271800246206 0.0763333333333333 0.0773333333333334 0.574102736982334 0.353775863568731 0.597821977265476 1.0137641252134 O60934 NBN O60934.S397.p_NBN O60934_S397s _1_1_397_397 O60934 O60934|A0A0C4DG07 Nibrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16651.16651.2 13.3 13.3 4.618 2 1 1 0 814.4314 1547.8867 S397s TMT10 395 (R) MLsQDAPTVK (E) MLS(0.99)QDAPT(0.0)VK K:TMT10,s:Phosphorylated S NBN 85642.2 7 6 562.1 271.59 HUMAN 1 2.4101 4.5127 EQKLKSYSEPEKMNE-p Q13796;S764-p EQKLKSYSEPEKMNE 0.126572282263763 0.00302296473868071 1.28733333333333 -1.05933333333333 18.6180472069715 37.8602531946713 1.28733333333333 -1.05933333333333 0.0137465994807986 0.000163672109743377 3.58844413762458 -9.20935819754906 Q13796 SHROOM2 Q13796.S764.p_SHROOM2 Q13796_S764s _1_1_764_764 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14774.14774.3 16.54 16.54 2.128 4 1 1 0 760.044 2198.1527 S764s TMT10 762 (K) SYsEPEKMNEVGLTR (G) S(0.0)Y(0.0)S(0.99)EPEKMNEVGLT(0.0)R K:TMT10,s:Phosphorylated S SHROOM2 177605.1 5 12 90.1 622.62 HUMAN 1 18.618 -37.8603 EQKMLTESGDPEEEE-p P07919;S13-p EQKMLTESGDPEEEE 0.851745743031252 0.357108983053956 -0.0283333333333333 0.118666666666667 1.3495041043991 5.9320720738986 -0.0283333333333333 0.118666666666667 0.732908214886121 0.255148366708337 -0.359387548764878 1.27215389414331 P07919 UQCRH P07919.S13.p_UQCRH P07919_S13s _1_1_13_13 P07919 P07919|A0A096LP55 Cytochrome b-c1 complex subunit 6, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31110.31110.4 10.98 10.98 1.124 4 1 1 0 829.3717 3234.4933 S13s TMT10 9 (K) MLTEsGDPEEEEEEEEELVDPLTTVR (E) MLT(0.0)ES(0.99)GDPEEEEEEEEELVDPLT(0.0)T(0.0)VR s:Phosphorylated S UQCRH 11023.9 1 1 3976.1 39.91 HUMAN 1 -1.3495 5.9321 EQKQLKESFRAFVED-p Q8N9T8;S163-p EQKQLKESFRAFVED 0.358511587478882 0.47626509616105 -0.353333333333333 -0.207666666666667 8.2776583539509 4.29677259293815 -0.353333333333333 -0.207666666666667 0.148673705093814 0.371811433637902 -1.68329578671972 -0.973275699447206 Q8N9T8 KRI1 Q8N9T8.S163.p_KRI1 Q8N9T8_S163s _1_1_163_163 Q8N9T8 Q8N9T8 Protein KRI1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10139.10139.3 7.87 7.87 99 1 1 1 0 482.6026 1365.8255 S163s TMT10 159 (K) QLKEsFR (A) QLKES(1.0)FR K:TMT10,s:Phosphorylated S KRI1 83053 1 2 863.1 210.23 HUMAN 1 -8.2777 -4.2968 EQKRMNLSPAKQFNI-p Q6SJ93;S426-p EQKRMNLSPAKQFNI 0.544861566721971 0.00272422972588299 0.11 -1.18733333333333 4.86986531937896 38.9212175312282 0.11 -1.18733333333333 0.32584680579761 0.000128197113560681 1.08015540379766 -9.65656934197101 Q6SJ93 FAM111B Q6SJ93.S426.p_FAM111B Q6SJ93_S426s _1_1_426_426 Q6SJ93 Q6SJ93|Q6SJ93-2 Protein FAM111B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14294.14294.2 8.93 3.63 99 1 1 1 0 649.8507 1218.7281 S426s TMT10 423 (R) MNLsPAK (Q) MNLS(1.0)PAK K:TMT10,s:Phosphorylated S FAM111B 85871 2 1 5632.1 17.6 HUMAN 1 4.8699 -38.9212 EQKSRPDSPRVKQGD-p Q6KC79;S892-p EQKSRPDSPRVKQGD 0.1560557092084 0.0303209355711931 0.244333333333333 0.352666666666667 16.1984766564596 20.5290351946649 0.244333333333333 0.352666666666667 0.0239967448798841 0.00885312264211956 3.10639321468983 3.98955826268426 Q6KC79 NIPBL Q6KC79.S892.p_NIPBL Q6KC79_S892s _1_1_892_892 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3221.3221.2 9.04 2.07 3.983 2 1 1 0 562.2768 1043.5795 S892s TMT10 888 (K) SRPDsPR (V) S(0.0)RPDS(0.99)PR s:Phosphorylated S NIPBL 318099.5 6 19 50.1 752.87 HUMAN 1 16.1985 20.529 EQKVGGVSPEEHPAP-p Q8TE77;S484-p EQKVGGVSPEEHPAP 0.110389830666072 0.311798737778312 -0.295 -0.0973333333333333 20.0260359173759 6.68930175881718 -0.295 -0.0973333333333333 0.00994022942582305 0.214323515414057 -3.88454018392397 -1.40613848797423 Q8TE77 SSH3 Q8TE77.S484.p_SSH3 Q8TE77_S484s _1_1_484_484 Q8TE77 Q8TE77|Q8TE77-3 Protein phosphatase Slingshot homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24643.24643.4 21.86 15.1 2.075 3 1 1 0 947.7208 3707.8845 S484s TMT10 480 (K) VGGVsPEEHPAPEVSTPFPPLPPEPEGGGEEK (V) VGGVS(0.99)PEEHPAPEVS(0.0)T(0.0)PFPPLPPEPEGGGEEK K:TMT10,s:Phosphorylated S SSH3 73336.6 6 8 930.1 199.29 HUMAN 1 -20.026 -6.6893 EQLARQGSFRGFPAL-p P49757;S276-p EQLARQGSFRGFPAL 0.826776350969775 0.520214955888018 0.05 -0.136666666666667 1.59270531510183 3.81274255043528 0.05 -0.136666666666667 0.692993990457326 0.415648047696286 0.416587410088857 -0.881017415583622 P49757 NUMB P49757.S276.p_NUMB P49757_S276s _1_1_276_276 P49757 P49757|P49757-3|Q9Y6R0|P49757-2|P49757-4|A0A0C4DGH3|G3V3Z8|P49757-9 Protein numb homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18760.18966.3 16.62 16.62 16.618 2 1 1 0 654.3523 1881.0747 S276s TMT10 274 (R) QGsFRGFPALSQK (M) QGS(0.99)FRGFPALS(0.0)QK K:TMT10,s:Phosphorylated S NUMB 71487.2 5 3 538.1 277.23 HUMAN 1 1.5927 -3.8127 EQLCEEFSEEERVRE-p Q9H3C7;S360-p EQLCEEFSEEERVRE 0.0428370985731628 0.0659852716617631 -0.571 -0.209666666666667 30.4786279681273 15.7068347696253 -0.571 -0.209666666666667 0.000895647675675751 0.0268730229506852 -6.57907929955908 -3.01002097540948 Q9H3C7 GGNBP2 Q9H3C7.S360.p_GGNBP2 Q9H3C7_S360s _1_1_360_360 Q9H3C7 Q9H3C7|Q9H3C7-3 Gametogenetin-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21655.21655.3 20.31 20.31 99 1 1 1 0 754.6823 2182.0648 S360s TMT10 352 (R) LEQLCEEFsEEERVR (E) LEQLCEEFS(1.0)EEERVR C:Carbamidomethylation,s:Phosphorylated S GGNBP2 81367.2 4 1 3126.1 60.06 HUMAN 1 -30.4786 -15.7068 EQLGSDQTNLFPKDS-p Q8NBF6;T355-p EQLGSDQTNLFPKDS 0.796289087702069 0.872719658475737 0.0376666666666667 0.0263333333333333 1.91189273754325 0.834160326638325 0.0376666666666667 0.0263333333333333 0.6438885855255 0.825247024913414 0.489200423560888 0.231723490131075 Q8NBF6 AVL9 Q8NBF6.T355.p_AVL9 Q8NBF6_T355t _1_1_355_355 Q8NBF6 Q8NBF6|B8ZZW5|Q8NBF6-2|A0A1W2PRP5 Late secretory pathway protein AVL9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16603.16603.3 10.16 4.78 1.664 2 1 1 0 767.3963 2220.2025 T355t TMT10 346 (K) EREQLGSDQtNLFPK (D) EREQLGS(0.0)DQT(0.99)NLFPK K:TMT10,t:Phosphorylated T AVL9 72288.4 1 4 3222.1 56.92 HUMAN 1 1.9119 0.8342 EQLKSPPSPELQGPP-p Q9HB09;S195-p EQLKSPPSPELQGPP 0.908579058015006 0.879173995306293 0.0206666666666667 0.017 0.818641095201722 0.784975006991141 0.0206666666666667 0.017 0.8282012668474 0.834646351530532 0.22774661716657 0.219015484371127 Q9HB09 BCL2L12 Q9HB09.S195.p_BCL2L12 Q9HB09_S195s _1_1_195_195 Q9HB09 Q9HB09|Q9HB09-3|I6LJZ7|A0A087WSV0 Bcl-2-like protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13731.13731.3 16.65 16.65 1.75 4 1 1 0 697.0248 2009.0955 S195s TMT10 192 (K) SPPsPELQGPPSTEK (E) S(0.0)PPS(0.99)PELQGPPS(0.0)T(0.0)EK K:TMT10,s:Phosphorylated S BCL2L12 37277.2 3 4 1874.1 109.69 HUMAN 1 0.8186 0.785 EQLLTSPSPS_____-p Q8N531;S537-p EQLLTSPSPS_____ 0.726261487694244 0.154894914339832 0.0593333333333333 0.152666666666667 2.63435899537341 10.650871667029 0.0593333333333333 0.152666666666667 0.545210361038688 0.0860820960545222 0.64511506539551 2.09414180236441 Q8N531 FBXL6 Q8N531.S537.p_FBXL6 Q8N531_S537s _1_1_537_537 Q8N531 Q8N531|Q8N531-2 F-box/LRR-repeat protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.37768.37768.2 14.31 14.31 1.732 4 1 1 0 1241.5922 2402.2111 S537s TMT10 521 (R) GLEEVQWCLEQLLTSPsPS (-) GLEEVQWCLEQLLT(0.0)S(0.0)PS(0.99)PS(0.0) C:Carbamidomethylation,s:Phosphorylated S FBXL6 59671.1 1 3 3250.1 55.9 HUMAN 1 2.6344 10.6509 EQLRQQLSPDRQPQS-p A0A1B0GUA8;S676-p EQLRQQLSPDRQPQS 0.221798193479614 0.042440151419834 -0.180333333333333 -0.342666666666667 12.5863551899732 18.3819263576287 -0.180333333333333 -0.342666666666667 0.0551270154983013 0.0145146766144324 -2.43679060997784 -3.53700301368252 A0A1B0GUA8 NotFound A0A1B0GUA8.S676.p_NotFound A0A1B0GUA8_S676s _1_1_676_676 A0A1B0GUA8 A0A1B0GUA8|Q9H1H9|Q9H1H9-2|Q9H1H9-4|Q9H1H9-3 Kinesin-like protein KIF13A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9888.9888.4 14.36 11.09 13.064 7 1 1 0 885.6956 3459.7981 S676s TMT10 673 (R) QQLsPDRQPQSSGPDRLAYSSQTAQQK (V) QQLS(0.99)PDRQPQS(0.0)S(0.0)GPDRLAY(0.0)S(0.0)S(0.0)QT(0.0)AQQK K:TMT10,s:Phosphorylated S KIF13A 208874.1 1 2 1079.1 180.11 HUMAN 1 -12.5864 -18.3819 EQLSRRRSGLEEPGK-p O75145;S207-p EQLSRRRSGLEEPGK 0.285446975514466 0.48474075042276 -0.212333333333333 0.0816666666666667 10.2741753799345 4.19960893465998 -0.212333333333333 0.0816666666666667 0.0938820278988989 0.380223632442806 -2.02938694437809 0.954930131436908 O75145 PPFIA3 O75145.S207.p_PPFIA3 O75145_S207s _1_1_207_207 O75145 O75145|O75145-2|R4GN36 Liprin-alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11575.11575.4 24.55 19.23 12.791 3 1 1 0 766.6132 2983.4667 S207s Hydrogen 207 (R) sGLEEPGKDGDGQTLANGLGPGGDSNRR (T) S(0.99)GLEEPGKDGDGQT(0.0)LANGLGPGGDS(0.0)NRR K:TMT10-Lys-Only,s:Phosphorylated S PPFIA3 134064.6 4 3 248.2 410.18 HUMAN 1 -10.2742 4.1996 EQLVRRESCGSSVLT-p O15231-3;S466-p EQLVRRESCGSSVLT 0.537153491656725 0.696174520275895 0.223666666666667 -0.0836666666666666 4.98952283624288 2.16170690497425 0.223666666666667 -0.0836666666666667 0.31699157257707 0.607896033310951 1.10213775189707 -0.544257566509393 O15231 ZNF185 O15231.3.S466.p_ZNF185 O15231-3_S466s _1_1_466_466 O15231-3 O15231-6|O15231-8|O15231-3|O15231-7|O15231-4|H7BZT5|O15231-5|O15231-2|O15231-9 Isoform 3 of Zinc finger protein 185 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18446.18446.4 19.93 19.93 1.117 5 1 1 0 739.129 2873.5282 S466s TMT10 464 (R) REsCGSSVLTDFEGKDVATK (V) RES(0.99)CGS(0.0)S(0.0)VLT(0.0)DFEGKDVAT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF185 74524.1 16 14 166.1 494.62 HUMAN 1 4.9895 -2.1617 EQMRKFLSDPQVHTV-p Q14204;S70-p EQMRKFLSDPQVHTV 0.862601543449273 0.726417877449663 0.027 -0.0406666666666667 1.25374005300944 1.9102686772384 0.027 -0.0406666666666667 0.74924869415613 0.644129415074284 0.336368850496373 -0.48878157857869 Q14204 DYNC1H1 Q14204.S70.p_DYNC1H1 Q14204_S70s _1_1_70_70 Q14204 Q14204 Cytoplasmic dynein 1 heavy chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21545.21545.3 16.18 16.18 5.732 2 1 1 0 650.3431 1869.0432 S70s TMT10 68 (K) FLsDPQVHTVLVER (S) FLS(0.99)DPQVHT(0.0)VLVER s:Phosphorylated S DYNC1H1 535136.6 1 2 1294.1 156.82 HUMAN 1 1.2537 -1.9103 EQNFDGTSDEEHEQE-p Q6YBV0;S36-p EQNFDGTSDEEHEQE 0.971689010406699 0.0731293901572789 0.00166666666666667 0.222666666666667 0.241863565934532 15.0851218341676 0.0075981309685062 0.222666666666667 0.945831216290823 0.0310090039665619 0.0711537088406893 2.89253049187611 Q6YBV0 SLC36A4 Q6YBV0.S36.p_SLC36A4 Q6YBV0_T35tS36s_2_2_35_36 Q6YBV0 Q6YBV0|E9PN09 Proton-coupled amino acid transporter 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27537.27742.5 15.12 9.72 6.067 2 2 2 0 961.4494 4642.2805 N31n T35t S36s TMT10 15 (R) REELDMDVMRPLINEQnFDGtsDEEHEQELLPVQK (H) REELDMDVMRPLIN(0.0)EQN(0.99)FDGT(1.0)S(1.0)DEEHEQELLPVQK K:TMT10,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S SLC36A4 56783.7 3 2 5503.1 18.73 HUMAN 1 0.2419 15.0851 EQNWANYSAEQNRMG-p P17302;S314-p EQNWANYSAEQNRMG 0.838788690758696 0.72197682317235 0.0483333333333333 0.0743333333333333 1.47741423138126 1.94957477867187 0.0483333333333333 0.0743333333333333 0.711637092871132 0.638325982157156 0.389688103233355 0.497548592041825 P17302 GJA1 P17302.S314.p_GJA1 P17302_S314s _1_1_314_314 P17302 P17302 Gap junction alpha-1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10443.10443.3 13.36 13.36 4.149 3 1 1 0 735.6558 2124.9896 S314s TMT10 304 (K) QASEQNWANYsAEQNR (M) QAS(0.0)EQNWANY(0.0)S(0.99)AEQNR s:Phosphorylated S GJA1 43521.1 1 6 1330.1 153.26 HUMAN 1 1.4774 1.9496 EQPASPASPLSSRQS-p Q66K14;S435-p EQPASPASPLSSRQS 0.097259252567129 0.887544824916948 0.459 -0.0176666666666666 21.4636040681636 0.728616641170149 0.459 -0.0176666666666666 0.00713903634855258 0.845548134837021 4.20033522702356 -0.204327809121265 Q66K14 TBC1D9B Q66K14.S435.p_TBC1D9B Q66K14_S435s _1_1_435_435 Q66K14 Q66K14|Q66K14-2 TBC1 domain family member 9B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13549.13549.4 27.43 27.18 2.244 10 1 1 0 930.4622 3638.855 S435s TMT10 409 (R) KASVVDPSTESSPAPQEGSEQPASPAsPLSSR (Q) KAS(0.0)VVDPS(0.0)T(0.0)ES(0.0)S(0.0)PAPQEGS(0.0)EQPAS(0.0)PAS(0.99)PLS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S TBC1D9B 141663.3 2 7 988.1 191.79 HUMAN 1 21.4636 -0.7286 EQPGEEYSEEEESVL-p Q96PY6-3;S1154-p EQPGEEYSEEEESVL 0.479708594865114 0.0107297167154974 -0.135 0.438333333333333 5.87220201713072 27.6113739478645 -0.135 0.438333333333333 0.258690093795919 0.00173325557275086 -1.26176380351727 5.72889587122483 Q96PY6 NEK1 Q96PY6.3.S1154.p_NEK1 Q96PY6-3_S1154s _1_1_1154_1154 Q96PY6-3 Q96PY6-3|Q96PY6-6|Q96PY6-2|Q96PY6-4 Isoform 3 of Serine/threonine-protein kinase Nek1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17884.17884.2 18.6 13.11 4.428 3 1 1 0 1210.5633 2340.1495 S1154s TMT10 1147 (R) EQPGEEYsEEEESVLK (N) EQPGEEY(0.0)S(0.99)EEEES(0.0)VLK K:TMT10,s:Phosphorylated S NEK1 146666.9 3 9 1537.1 133.31 HUMAN 1 -5.8722 27.6114 EQPPAPESPESRALV-p O60307;S348-p EQPPAPESPESRALV 0.40510372613943 0.0244723015747567 -0.167666666666667 -0.360666666666667 7.24665352587966 21.9423957018531 -0.167666666666667 -0.360666666666667 0.188510110245391 0.00639382035400234 -1.50412328158713 -4.3042328614573 O60307 MAST3 O60307.S348.p_MAST3 O60307_S348s _1_1_348_348 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36358.36358.5 31.42 31.42 2.422 5 1 1 0 1187.4246 5853.0875 S348s TMT10 306 (R) EGQGIKTDLPQYIIGQLGLAKDPLEEMVPLSHLEEEQPPAPEsPESR (A) EGQGIKT(0.0)DLPQY(0.0)IIGQLGLAKDPLEEMVPLS(0.0)HLEEEQPPAPES(0.99)PES(0.0)R K:TMT10,s:Phosphorylated S MAST3 143933.5 3 25 121.3 549.41 HUMAN 1 -7.2467 -21.9424 EQPRAGSSTPGDAPP-p Q7Z6Z7;S2888-p EQPRAGSSTPGDAPP 0.525553689105919 0.387580537185384 0.0866666666666667 0.112666666666667 5.16783257380182 5.47231364446992 0.0866666666666667 0.112666666666667 0.30424030138322 0.283640756852344 1.13472723316057 1.18969103985268 Q7Z6Z7 HUWE1 Q7Z6Z7.S2888.p_HUWE1 Q7Z6Z7_S2888sT2889t_2_2_2888_2889 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15382.15382.2 11.48 11.48 1.17 3 2 2 0 1078.4801 1996.0297 S2888s T2889t TMT10 2885 (R) AGSstPGDAPPAVAEVQGR (S) AGS(0.0)S(0.99)T(0.99)PGDAPPAVAEVQGR s:Phosphorylated S,t:Phosphorylated T HUWE1 485818.9 2 70 11.1 1210.45 HUMAN 1 5.1678 5.4723 EQPRDTASPVPA___-p Q9NW81-4;S259-p EQPRDTASPVPA___ 0.23023846434213 0.00402946944258155 0.195333333333333 0.582333333333333 12.2545050615887 35.2973007819101 0.195333333333333 0.582333333333333 0.0595044566423505 0.000295304402624808 2.3775597183669 8.20430679211161 Q9NW81 ATP5SL Q9NW81.4.S259.p_ATP5SL Q9NW81-4_S259s _1_1_259_259 Q9NW81-4 Q9NW81-4|Q9NW81-5 Isoform 4 of Distal membrane-arm assembly complex protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8393.8393.2 11.34 11.34 1.412 3 1 1 0 973.9582 1866.9395 S259s TMT10 248 (K) SGPEEQPRDTAsPVPA (-) S(0.0)GPEEQPRDT(0.0)AS(0.99)PVPA s:Phosphorylated S DMAC2 30655.4 2 1 6493.1 11.34 HUMAN 1 12.2545 35.2973 EQPSPPNSDSGQDAH-p Q9BUA3;S152-p EQPSPPNSDSGQDAH 0.285207992770294 0.0964274565937789 0.218333333333333 0.372333333333333 10.2838153599379 13.431899879992 0.218333333333333 0.372333333333333 0.0936738702500385 0.045374307717604 2.03106490582066 2.58771548751437 Q9BUA3 C11orf84 Q9BUA3.S152.p_C11orf84 Q9BUA3_S148sS152s_2_2_148_152 Q9BUA3 Q9BUA3 SPIN1-docking protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37264.37264.5 25.92 25.92 1.2 5 2 2 0 1026.0632 4966.3677 S148s S152s TMT10 126 (K) SNILEAWSEGVALLQDVRAEQPsPPNsDSGQDAHPDPDANPDAAR (M) S(0.0)NILEAWS(0.0)EGVALLQDVRAEQPS(0.99)PPNS(0.99)DS(0.0)GQDAHPDPDANPDAAR s:Phosphorylated S C11orf84 41321.3 8 11 884.1 206.69 HUMAN 1 10.2838 13.4319 EQPSRNSSLLEPQKS-p Q6P0N0;S135-p EQPSRNSSLLEPQKS 0.780995115911564 0.0662540131909753 -0.0416666666666667 -0.472666666666667 2.06247828625548 15.6794305040371 -0.0416666666666667 -0.472666666666667 0.621945272993084 0.0270431296091009 -0.52259427381668 -3.00480609537007 Q6P0N0 MIS18BP1 Q6P0N0.S135.p_MIS18BP1 Q6P0N0_S135s _1_1_135_135 Q6P0N0 Q6P0N0|G5E9K5|Q6P0N0-2 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14457.14457.2 12.46 7.22 1.438 2 1 1 0 777.421 1473.8677 S135s TMT10 133 (R) NSsLLEPQK (S) NS(0.0)S(0.99)LLEPQK K:TMT10,s:Phosphorylated S MIS18BP1 129996 2 7 54.1 728.39 HUMAN 1 -2.0625 -15.6794 EQPVQFRSFDRSVIV-p P50851;S1721-p EQPVQFRSFDRSVIV 0.375353006688508 0.698611546022269 0.141666666666667 -0.0423333333333333 7.87399994779619 2.14053215666405 0.141666666666667 -0.0423333333333333 0.163154856352703 0.610867168566062 1.61329511978919 -0.53963946781867 P50851 LRBA P50851.S1721.p_LRBA P50851_S1721s _1_1_1721_1721 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17366.17366.3 12 12 2.223 2 1 1 0 577.6605 1650.9943 S1721s TMT10 1721 (R) sFDRSVIVAAK (K) S(0.99)FDRS(0.0)VIVAAK K:TMT10,s:Phosphorylated S LRBA 321783.7 5 20 74.1 649.16 HUMAN 1 7.874 -2.1405 EQQKGRRSPDSCRPQ-p Q9Y283-2;S614-p EQQKGRRSPDSCRPQ 0.185220024211789 0.838118784054212 0.312 0.03 14.3990896216066 1.07802969107111 0.312 0.03 0.0363154172030739 0.780183984424014 2.76649118684932 0.293309228760386 Q9Y283 INVS Q9Y283.2.S614.p_INVS Q9Y283-2_S614s _1_1_614_614 Q9Y283-2 Q9Y283|Q9Y283-2 Isoform 2 of Inversin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11242.11242.4 15.08 13.33 1.192 5 1 1 0 787.3821 3066.5523 S614s TMT10 611 (K) GRRsPDSCRPQALPCLPSTQDVPSR (Q) GRRS(0.99)PDS(0.0)CRPQALPCLPS(0.0)T(0.0)QDVPS(0.0)R C:Carbamidomethylation,s:Phosphorylated S INVS 100418.1 2 1 3865.1 41.56 HUMAN 1 14.3991 1.078 EQQSKKVSQEILELL-p Q86U44;S243-p EQQSKKVSQEILELL 0.54703370941574 0.646451769518778 0.121666666666667 0.062 4.83539592575608 2.58322174423879 0.121666666666667 0.062 0.328443300314569 0.551668041322883 1.07380540711342 0.634327492770102 Q86U44 METTL3 Q86U44.S243.p_METTL3 Q86U44_S243s _1_1_243_243 Q86U44 Q86U44 N6-adenosine-methyltransferase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32519.32519.4 11.54 11.55 8.294 4 1 1 0 639.621 2475.5001 S243s TMT10 241 (K) KVsQEILELLNTTTAK (E) KVS(0.99)QEILELLNT(0.0)T(0.0)T(0.0)AK K:TMT10,s:Phosphorylated S METTL3 65214.5 1 5 1904.1 108.18 HUMAN 1 4.8354 2.5832 EQQSWVISPPQPSPQ-p Q08AD1;S931-p EQQSWVISPPQPSPQ 0.804810784528067 0.202515080818404 -0.036 -0.174333333333333 1.81821988282125 9.12461287611652 -0.036 -0.174333333333333 0.657927458090813 0.122331615884104 -0.46815829924947 -1.82926820573114 Q08AD1 CAMSAP2 Q08AD1.S931.p_CAMSAP2 Q08AD1_S931s _1_1_931_931 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20169.20169.3 10.6 10.6 5.746 3 1 1 0 792.0788 2294.2545 S931s TMT10 924 (R) EQQSWVIsPPQPSPQK (Q) EQQS(0.0)WVIS(0.99)PPQPS(0.0)PQK K:TMT10,s:Phosphorylated S CAMSAP2 169284 2 17 28.2 931.95 HUMAN 1 -1.8182 -9.1246 EQRDMLGSLRDSALF-p Q9H3Q1;S105-p EQRDMLGSLRDSALF 0.483329940315477 0.196057108702102 0.208666666666667 -0.424 5.81568471797463 9.30670457025808 0.208666666666667 -0.424 0.262078580736143 0.117308516580664 1.25165887639943 -1.86077440811198 Q9H3Q1 CDC42EP4 Q9H3Q1.S105.p_CDC42EP4 Q9H3Q1_S105s _1_1_105_105 Q9H3Q1 Q9H3Q1 Cdc42 effector protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26717.26717.3 13.48 13.48 2.52 2 1 1 0 697.3771 2010.1458 S105s TMT10 101 (R) DMLGsLRDSALFVK (N) DMLGS(0.99)LRDS(0.0)ALFVK K:TMT10,s:Phosphorylated S CDC42EP4 38036.3 2 6 635.1 256.47 HUMAN 1 5.8157 -9.3067 EQRDRICSDEEEDEE-p Q9NPG3;S493-p EQRDRICSDEEEDEE 0.271389173621348 0.201309410136615 -0.221 0.239 10.7349434223161 9.15833208688838 -0.221 0.239 0.0844317241174438 0.1213854943389 -2.10973579090863 1.83510160445607 Q9NPG3 UBN1 Q9NPG3.S493.p_UBN1 Q9NPG3_S493s _1_1_493_493 Q9NPG3 Q9NPG3|Q9NPG3-2 Ubinuclein-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10508.10508.2 13.85 13.85 99 1 1 1 0 960.9142 1840.8523 S493s TMT10 491 (R) ICsDEEEDEEK (G) ICS(1.0)DEEEDEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UBN1 122088.8 5 2 1087.1 179.43 HUMAN 1 -10.7349 9.1583 EQRKENPSPLFSIKK-p Q9P1Y6;S814-p EQRKENPSPLFSIKK 0.113112267835937 0.0474314243484607 -0.464 0.437 19.7548494953611 17.711822430136 -0.464 0.437 0.0105807158280387 0.0169362695455405 -3.82653484232828 3.40144810230255 Q9P1Y6 PHRF1 Q9P1Y6.S814.p_PHRF1 Q9P1Y6_S814s _1_1_814_814 Q9P1Y6 Q9P1Y6|Q9P1Y6-3|A0A0J9YWD5|A0A0J9YYB5|F8WEF5|B7ZM65|E9PJ24|Q9P1Y6-2|A0A0J9YX88 PHD and RING finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20414.20414.3 13.98 13.98 5.831 2 1 1 0 676.3889 1947.1882 S814s TMT10 811 (K) ENPsPLFSIKK (T) ENPS(0.99)PLFS(0.0)IKK K:TMT10,s:Phosphorylated S PHRF1 180374.6 3 6 438.1 312.23 HUMAN 1 -19.7548 17.7118 EQRMRSLSSTSSGSK-p P23508-2;S873-p EQRMRSLSSTSSGSK 0.316524229210426 0.0325934090013893 -0.152333333333333 -0.353333333333333 9.35349887173429 20.0643007544596 -0.152333333333333 -0.353333333333333 0.116051327540968 0.00985303270989604 -1.86957442777262 -3.88910946498906 P23508 MCC P23508.2.S873.p_MCC P23508-2_S873s _1_1_873_873 P23508-2 P23508-2|D6REY2|A0A096LNU0 Isoform 2 of Colorectal mutant cancer protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7576.7576.2 11.14 11.14 1.142 7 1 1 0 739.8762 1398.784 S873s TMT10 871 (R) SLsSTSSGSK (D) S(0.0)LS(0.99)S(0.0)T(0.0)S(0.0)S(0.0)GS(0.0)K K:TMT10,s:Phosphorylated S MCC 114360.6 1 4 2916.1 66.06 HUMAN 1 -9.3535 -20.0643 EQRNDARSPGSISYL-p O75376-2;S2081-p EQRNDARSPGSISYL 0.97158608608734 0.289091653225778 -0.007 0.102666666666667 0.243756732480634 7.11070706378901 -0.00700000000000001 0.102666666666667 0.945419001568411 0.19450433882813 -0.0716962715725221 1.4799629418772 O75376 NCOR1 O75376.2.S2081.p_NCOR1 O75376-2_S2081s _1_1_2081_2081 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27417.27417.3 18.23 18.23 2.248 6 1 1 0 842.4332 2445.3178 S2081s TMT10 2077 (R) NDARsPGSISYLPSFFTK (L) NDARS(0.99)PGS(0.0)IS(0.0)Y(0.0)LPS(0.0)FFT(0.0)K K:TMT10,s:Phosphorylated S NCOR1 259453.1 28 30 35.1 889.74 HUMAN 1 -0.2438 7.1107 EQRQSKLSPQMQVHQ-p Q12830;S2370-p EQRQSKLSPQMQVHQ 0.931597855638632 0.795799815820746 -0.0166666666666667 -0.0293333333333333 0.609645702950797 1.38517124616238 -0.0140928814960446 -0.0293333333333333 0.86903132189193 0.726913735796311 -0.172876022030127 -0.367848382282939 Q12830 BPTF Q12830.S2370.p_BPTF Q12830_S2370s _1_1_2370_2370 Q12830 Q12830|Q12830-2|Q12830-4 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10062.10062.3 16.08 16.08 2.193 2 1 1 0 807.769 2341.3265 S2370s TMT10 2366 (R) QSKLsPQMQVHQDK (T) QS(0.0)KLS(0.99)PQMQVHQDK K:TMT10,s:Phosphorylated S BPTF 340995.1 8 26 94.1 610.41 HUMAN 1 -0.6096 -1.3852 EQRRRRASSVLAQRR-p O14681;S46-p EQRRRRASSVLAQRR 0.301898438592857 0.115633496300883 -0.252666666666667 -0.222 9.74689527403706 12.3590879029916 -0.252666666666667 -0.222 0.106001124535891 0.0580886401368327 -1.93776915268437 -2.39495623922316 O14681 EI24 O14681.S46.p_EI24 O14681_S46s _1_1_46_46 O14681 O14681|O14681-3|E9PK61 Etoposide-induced protein 2.4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6283.6283.3 8.31 8.31 1.114 2 1 1 0 432.9041 1216.7323 S46s TMT10 44 (R) RAsSVLAQR (R) RAS(0.99)S(0.0)VLAQR s:Phosphorylated S EI24 39249.3 2 1 3055.1 62.02 HUMAN 1 -9.7469 -12.3591 EQSEVSVSPRASKHH-p Q7L4I2;S32-p EQSEVSVSPRASKHH 0.969775486982299 0.335709039269514 0.00633333333333333 0.102 0.261853593938786 6.28275865883002 0.00633333333333333 0.102 0.941487678378163 0.235355382060603 0.0768720163039275 1.33445075318348 Q7L4I2 RSRC2 Q7L4I2.S32.p_RSRC2 Q7L4I2_S32s _1_1_32_32 Q7L4I2 Q7L4I2|E9PI52 Arginine/serine-rich coiled-coil protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6698.6698.2 15.7 11.35 2.173 3 1 1 0 892.4717 1703.9692 S32s TMT10 24 (K) KEQSEVSVsPR (A) KEQS(0.0)EVS(0.0)VS(0.99)PR K:TMT10,s:Phosphorylated S RSRC2 50615.9 16 3 1070.1 180.75 HUMAN 1 0.2619 6.2828 EQSGLQASLEAEQEA-p Q96L93-2;S1052-p EQSGLQASLEAEQEA 0.627993569436905 0.505881687739408 0.115 -0.0736666666666667 3.75254203911203 3.96563842316927 0.115 -0.0736666666666667 0.421449745667377 0.401269506359529 0.869522044922388 -0.910402419445132 Q96L93 KIF16B Q96L93.2.S1052.p_KIF16B Q96L93-2_S1052s _1_1_1052_1052 Q96L93-2 Q96L93-2|Q96L93-4|Q96L93-6|Q96L93-5 Isoform 2 of Kinesin-like protein KIF16B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32690.32690.5 16.22 16.22 3.706 3 1 1 0 880.8549 4320.2814 S1052s TMT10 1045 (R) EQSGLQAsLEAEQEALEKDQERLEYEIQQLK (Q) EQS(0.0)GLQAS(0.99)LEAEQEALEKDQERLEY(0.0)EIQQLK K:TMT10,s:Phosphorylated S KIF16B 160684.4 3 12 774.1 227.33 HUMAN 1 3.7525 -3.9656 EQSLRTASDQESGDE-p Q9BXL6;S255-p EQSLRTASDQESGDE 0.137433340794007 0.0217289506549123 0.440333333333333 0.523666666666667 17.6506595921691 22.735079210138 0.440333333333333 0.523666666666667 0.0171764749669644 0.0053271150821128 3.39190742013349 4.48712734922319 Q9BXL6 CARD14 Q9BXL6.S255.p_CARD14 Q9BXL6_S255s _1_1_255_255 Q9BXL6 Q9BXL6|Q9BXL6-2|I3L414|Q9BXL6-3 Caspase recruitment domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5576.5576.3 8.21 8.21 1.155 3 1 1 0 620.6011 1779.8194 S255s TMT10 253 (R) TAsDQESGDEELNR (L) T(0.0)AS(0.99)DQES(0.0)GDEELNR s:Phosphorylated S CARD14 114922.3 1 3 816.1 219.94 HUMAN 1 17.6507 22.7351 EQSLVKGSPPASILS-p Q9BXW6;S465-p EQSLVKGSPPASILS 0.765450257297911 0.761781430552008 -0.043 0.0396666666666667 2.23015506581578 1.632669141781 -0.043 0.0396666666666667 0.598390229021965 0.686646302564648 -0.559189079659089 0.425778388447443 Q9BXW6 OSBPL1A Q9BXW6.S465.p_OSBPL1A Q9BXW6_S465s _1_1_465_465 Q9BXW6 Q9BXW6|Q9BXW6-4 Oxysterol-binding protein-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30409.30409.3 17.2 17.2 2.529 7 1 1 0 970.7638 2830.3104 S465s TMT10 464 (K) GsPPASILSEDEFYDALSDSESER (S) GS(0.99)PPAS(0.0)ILS(0.0)EDEFY(0.0)DALS(0.0)DS(0.0)ES(0.0)ER s:Phosphorylated S OSBPL1A 109837.2 1 2 1553.1 132.3 HUMAN 1 -2.2302 1.6327 EQSTPPKSPQ_____-p Q92615;S736-p EQSTPPKSPQ_____ 0.082725217843879 0.0377832821591254 -0.373666666666667 -0.288 23.1331729912853 19.1087003975871 -0.373666666666667 -0.288 0.00486051962365001 0.0122780659057734 -4.58598016090396 -3.6869694328589 Q92615 LARP4B Q92615.S736.p_LARP4B Q92615_S736s _1_1_736_736 Q92615 Q92615 La-related protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5980.6186.2 9.21 9.21 1.785 3 1 1 0 818.9207 1556.8684 S736s TMT10 729 (R) EQSTPPKsPQ (-) EQS(0.0)T(0.0)PPKS(0.99)PQ K:TMT10,s:Phosphorylated S LARP4B 80949.9 2 14 332.1 357.69 HUMAN 1 -23.1332 -19.1087 EQTTSHESQ______-p Q8IW41;S472-p EQTTSHESQ______ 0.19388225330361 0.216119016491305 0.222 0.126666666666667 13.911733628034 8.75579971783182 0.222 0.126666666666667 0.0406281116435966 0.133174179035517 2.6767269016612 1.76547521182439 Q8IW41 MAPKAPK5 Q8IW41.S472.p_MAPKAPK5 Q8IW41_S472s _1_1_472_472 Q8IW41 Q8IW41|Q8IW41-2 MAP kinase-activated protein kinase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8123.8123.2 18.38 18.38 7.039 4 1 1 0 912.9144 1744.8551 S472s TMT10 461 (K) QVIEEQTTSHEsQ (-) QVIEEQT(0.0)T(0.0)S(0.0)HES(0.99)Q s:Phosphorylated S MAPKAPK5 54675.9 2 3 2819.1 69.46 HUMAN 1 13.9117 8.7558 EQVLSKKTPPAPSPF-p O95239;T1181-p EQVLSKKTPPAPSPF 0.714904870572646 0.00529900879737328 -0.0526666666666667 -0.510666666666667 2.7470884081603 33.0486428390261 -0.0526666666666667 -0.510666666666667 0.531240478473964 0.000495605042124603 -0.668557694217572 -7.40271618971327 O95239 KIF4A O95239.T1181.p_KIF4A O95239_T1181t _1_1_1181_1181 O95239 O95239 Chromosome-associated kinesin KIF4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30063.30063.3 14.92 13.78 4.624 2 1 1 0 683.035 1967.1254 T1181t TMT10 1181 (K) tPPAPSPFDLPELK (H) T(0.99)PPAPS(0.0)PFDLPELK K:TMT10,t:Phosphorylated T KIF4A 141476.1 5 14 516.1 285.41 HUMAN 1 -2.7471 -33.0486 EQYVPPRSPK_____-p Q71RC2-4;S728-p EQYVPPRSPK_____ 0.14371133901046 0.00593024100698322 -0.266666666666667 -0.642 17.1997980496211 32.177887954284 -0.266666666666667 -0.642 0.0190554932545819 0.000605635333602598 -3.3020909075362 -7.11074815182853 Q71RC2 LARP4 Q71RC2.4.S728.p_LARP4 Q71RC2-4_S728s _1_1_728_728 Q71RC2-4 Q71RC2-4|Q71RC2-3|Q71RC2-5|Q71RC2-6|Q71RC2-2 Isoform 4 of La-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8714.9134.3 13.95 7.16 8.661 2 1 1 0 580.315 1658.963 S728s TMT10 721 (K) EQYVPPRsPK (-) EQY(0.0)VPPRS(0.99)PK K:TMT10,s:Phosphorylated S LARP4 81926.9 25 8 841.1 214.37 HUMAN 1 -17.1998 -32.1779 ERAELAHSPLPAKYI-p Q9BRK3-2;S429-p ERAELAHSPLPAKYI 0.307683564583907 0.0125117764686051 0.281333333333333 -0.465666666666667 9.56574185325559 26.5441510130987 0.281333333333333 -0.465666666666667 0.110516167172449 0.00221607726706825 1.9063533969393 -5.438456429543 Q9BRK3 MXRA8 Q9BRK3.2.S429.p_MXRA8 Q9BRK3-2_S429s _1_1_429_429 Q9BRK3-2 Q9BRK3-2|Q9BRK3-3|Q9BRK3-4 Isoform 2 of Matrix remodeling-associated protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9120.9120.2 12.33 9.26 99 1 1 1 0 721.8841 1362.7943 S429s Hydrogen 424 (R) AELAHsPLPAK (Y) AELAHS(1.0)PLPAK K:TMT10-Lys-Only,s:Phosphorylated S MXRA8 50018.5 2 3 4167.1 36.31 HUMAN 1 9.5657 -26.5442 ERAIKAMTPEQEETA-p Q15276;T480-p ERAIKAMTPEQEETA 0.486016018411509 0.167027441776372 0.119666666666667 0.147 5.77465187288295 10.2230645160012 0.119666666666667 0.147 0.264566476067716 0.0949934254157851 1.24431371721419 2.01965507367228 Q15276 RABEP1 Q15276.T480.p_RABEP1 Q15276_T480t_1_1_480_480 Q15276 Q15276|Q15276-2 Rab GTPase-binding effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.33997.33997.3 25.92 25.92 9.271 11 1 1 0 1211.2153 3535.677 M479m T480t TMT10 478 (K) AmtPEQEETASLLSSVTQGMESAYVSPSGYR (L) AM(0.99)T(0.99)PEQEET(0.0)AS(0.0)LLS(0.0)S(0.0)VT(0.0)QGM(0.0)ES(0.0)AY(0.0)VS(0.0)PS(0.0)GY(0.0)R m:Oxidized methionine,t:Phosphorylated T RABEP1 99688.1 15 8 933.1 198.92 HUMAN 1 5.7747 10.2231 ERAKLNITPTKKGRK-p Q7KZ85;T619-p ERAKLNITPTKKGRK 0.279555956993748 0.62099239363169 -0.233666666666667 -0.0483333333333333 10.4631025210428 2.81374541653139 -0.233666666666667 -0.0483333333333333 0.0898855226236139 0.52314907088461 -2.06229476818222 -0.682228766077531 Q7KZ85 SUPT6H Q7KZ85.T619.p_SUPT6H Q7KZ85_T619t _1_1_619_619 Q7KZ85 Q7KZ85 Transcription elongation factor SPT6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14357.14357.2 11.29 11.29 1.592 2 1 1 0 841.5146 1602.0557 T619t TMT10 616 (K) LNItPTKK (G) LNIT(0.99)PT(0.0)KK K:TMT10,t:Phosphorylated T SUPT6H 200324.3 7 6 279.1 388.92 HUMAN 1 -10.4631 -2.8137 ERAMDNHSDSEEELA-p Q86VR2;S258-p ERAMDNHSDSEEELA 0.568359021872866 0.520274476544511 0.149 0.0666666666666667 4.51729360693365 3.81179328855256 0.149 0.0666666666666667 0.353403331551524 0.415738908158107 1.01480657572852 0.880834230524546 Q86VR2 FAM134C Q86VR2.S258.p_FAM134C Q86VR2_S258s_1_1_258_258 Q86VR2 Q86VR2|K7EQI9|Q86VR2-2 Reticulophagy regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21195.21195.3 20.58 20.58 1.114 4 1 1 0 1078.4606 3137.3989 M254m S258s TMT10 253 (R) AmDNHsDSEEELAAFCPQLDDSTVAR (E) AM(1.0)DNHS(0.99)DS(0.0)EEELAAFCPQLDDS(0.0)T(0.0)VAR C:Carbamidomethylation,m:Oxidized methionine,s:Phosphorylated S RETREG3 51794.7 2 3 1136.1 173.56 HUMAN 1 4.5173 3.8118 ERAMEGNSSDQEQSP-p Q86Y91-4;S467-p ERAMEGNSSDQEQSP 0.830410346197645 0.275138530531474 0.0533333333333333 -0.218666666666667 1.55436882323216 7.38505289732273 0.0533333333333333 -0.218666666666667 0.699138337825272 0.182597450846286 0.407684752095744 -1.52781482928691 Q86Y91 KIF18B Q86Y91.4.S467.p_KIF18B Q86Y91-4_S467s _1_1_467_467 Q86Y91-4 Q86Y91-4|Q86Y91-3|A0A0C4DGP5 Isoform 4 of Kinesin-like protein KIF18B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18076.18076.4 26.52 26.52 1.114 6 1 1 0 1225.5262 4819.1057 S467s TMT10 462 (R) AMEGNsSDQEQSPEDEDEGPAEEVPTQMPEQNPTHALPESPR (L) AMEGNS(0.99)S(0.0)DQEQS(0.0)PEDEDEGPAEEVPT(0.0)QMPEQNPT(0.0)HALPES(0.0)PR s:Phosphorylated S KIF18B 96039.4 1 4 959.1 194.54 HUMAN 1 1.5544 -7.3851 ERARIYSSDSDEGSE-p Q8WVC0;S608-p ERARIYSSDSDEGSE 0.151514767715561 0.0192035253059585 -0.251333333333333 0.67 16.5022785605927 23.5956261776631 -0.251333333333333 0.67 0.0223754688375864 0.00436955673064404 -3.16523700169032 4.69123038343086 Q8WVC0 LEO1 Q8WVC0.S608.p_LEO1 Q8WVC0_S608s _1_1_608_608 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11689.11689.2 13.56 9.74 1.136 5 1 1 0 1049.9607 2018.9442 S608s TMT10 605 (R) IYSsDSDEGSEEDK (A) IY(0.0)S(0.0)S(0.99)DS(0.0)DEGS(0.0)EEDK K:TMT10,s:Phosphorylated S LEO1 75516.9 6 12 514.1 286.88 HUMAN 1 -16.5023 23.5956 ERARLLQSPCVDTAP-p Q9NVC3;S28-p ERARLLQSPCVDTAP 0.708467956824754 0.665317298558615 0.0593333333333333 -0.0613333333333333 2.81314598590333 2.42261363740121 0.0593333333333333 -0.0613333333333333 0.523221282996846 0.572451419022821 0.682197707951443 -0.600408894801154 Q9NVC3 SLC38A7 Q9NVC3.S28.p_SLC38A7 Q9NVC3_S28s _1_1_28_28 Q9NVC3 Q9NVC3|H3BMC5|Q9NVC3-2|H3BP25|H3BU46 Putative sodium-coupled neutral amino acid transporter 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19517.19517.3 8.98 8.98 2.782 2 1 1 0 622.9985 1787.0137 S28s TMT10 25 (R) LLQsPCVDTAPK (S) LLQS(0.99)PCVDT(0.0)APK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLC38A7 50649.4 1 2 4417.1 31.74 HUMAN 1 2.8131 -2.4226 ERARSTPSPVLQPRD-p Q8TEK3;S902-p ERARSTPSPVLQPRD 0.391178814803887 0.892254611689021 0.312333333333333 -0.018 7.52504790340106 0.695588340658963 0.312333333333333 -0.018 0.176805271571231 0.852003082325715 1.55264254509778 -0.195655826104921 Q8TEK3 DOT1L Q8TEK3.S902.p_DOT1L Q8TEK3_S902s _1_1_902_902 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10575.10575.3 8.8 8.8 1.372 3 1 1 0 464.2484 1310.763 S902s TMT10 899 (R) STPsPVLQPR (D) S(0.0)T(0.0)PS(0.99)PVLQPR s:Phosphorylated S DOT1L 185648.6 2 13 132.1 534.85 HUMAN 1 7.525 -0.6956 ERASREESWESGRSE-p Q9NQ29;S336-p ERASREESWESGRSE 0.799181127526886 0.198008576778493 0.0556666666666667 -0.147666666666667 1.87598141466117 9.25474069429896 0.0556666666666667 -0.147666666666667 0.649234901494149 0.118720558381987 0.481158639642132 -1.85178219717434 Q9NQ29 LUC7L Q9NQ29.S336.p_LUC7L Q9NQ29_S336s _1_1_336_336 Q9NQ29 Q9NQ29 Putative RNA-binding protein Luc7-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5492.5492.3 13.19 13.19 3.766 3 1 1 0 534.9088 1522.7448 S336s TMT10 331 (R) ASREEsWESGR (S) AS(0.0)REES(0.99)WES(0.0)GR s:Phosphorylated S LUC7L 44126.6 6 1 2670.1 74.39 HUMAN 1 1.876 -9.2547 ERCPARLSDSENEEP-p Q8NCN4;S247-p ERCPARLSDSENEEP 0.886483152928741 0.23035262023862 0.023 -0.138 1.02006589313229 8.39768437361538 0.023 -0.138 0.790666631555394 0.144621067415199 0.278904199347131 -1.70351935609074 Q8NCN4 RNF169 Q8NCN4.S247.p_RNF169 Q8NCN4_S247s _1_1_247_247 Q8NCN4 Q8NCN4 E3 ubiquitin-protein ligase RNF169 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5285.5285.4 13.42 10.58 1.672 5 1 1 0 749.5885 2915.3686 S247s TMT10 242 (R) CPARLsDSENEEPSRGQMTQTHR (S) CPARLS(0.99)DS(0.0)ENEEPS(0.0)RGQMT(0.0)QT(0.0)HR C:Carbamidomethylation,s:Phosphorylated S RNF169 78277 4 3 729.1 236.14 HUMAN 1 1.0201 -8.3977 ERDATNRSPTQIVKM-p A7KAX9;S952-p ERDATNRSPTQIVKM 0.885085103006421 0.115440315915685 -0.033 0.201333333333333 1.04676276639399 12.3706689567191 -0.033 0.201333333333333 0.785821167912303 0.0579339452173308 -0.28556758952189 2.39701905758843 A7KAX9 ARHGAP32 A7KAX9.S952.p_ARHGAP32 A7KAX9_S952s _1_1_952_952 A7KAX9 A7KAX9|A7KAX9-2|G3V174 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9310.9332.3 12.34 9.19 2.125 3 1 1 0 623.3398 1788.038 S952s TMT10 947 (R) DATNRsPTQIVK (M) DAT(0.0)NRS(0.99)PT(0.0)QIVK K:TMT10,s:Phosphorylated S ARHGAP32 232236.5 8 18 159.1 497.4 HUMAN 1 -1.0468 12.3707 ERDQRPSSPIRHQGR-p Q5T200;S643-p ERDQRPSSPIRHQGR 0.825157658635187 0.239171575601515 0.0373333333333333 0.139666666666667 1.60797720088343 8.18556986624205 0.0373333333333333 0.139666666666667 0.690561369443695 0.151859866367819 0.420122537549801 1.66679627444603 Q5T200 ZC3H13 Q5T200.S643.p_ZC3H13 Q5T200_S643s _1_1_643_643 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3211.3211.5 13.29 13.29 1.426 2 1 1 0 426.4202 2048.1059 S643s TMT10 636 (R) ERDQRPSsPIRHQGR (N) ERDQRPS(0.0)S(0.99)PIRHQGR s:Phosphorylated S ZC3H13 197316.7 7 13 24.1 987.82 HUMAN 1 1.608 8.1856 ERDSRPASPAGALKP-p Q92623;S105-p ERDSRPASPAGALKP 0.355970344233042 0.115798882599406 0.181666666666667 0.183666666666667 8.33912381202145 12.3492844439885 0.181666666666667 0.183666666666667 0.146584354467664 0.058219913466371 1.69394439225624 2.39321033092881 Q92623 TTC9 Q92623.S105.p_TTC9 Q92623_S105s _1_1_105_105 Q92623 Q92623 Tetratricopeptide repeat protein 9A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7629.7629.4 12.95 12.95 3.162 2 1 1 0 505.2788 1938.1285 S105s TMT10 100 (R) DSRPAsPAGALKPGR (L) DS(0.0)RPAS(0.99)PAGALKPGR K:TMT10,s:Phosphorylated S TTC9 24720.7 10 2 3287.1 54.98 HUMAN 1 8.3391 12.3493 EREDDKDSDQETVDE-p Q9BVP2;S490-p EREDDKDSDQETVDE 0.9425509765566 0.0198820678015821 -0.024 0.481333333333333 0.505958131670812 23.3393104243848 -0.024 0.481333333333334 0.890029059944088 0.00463520511983282 -0.144906610128096 4.62981679061284 Q9BVP2 GNL3 Q9BVP2.S490.p_GNL3 Q9BVP2_S490s _1_1_490_490 Q9BVP2 Q9BVP2|Q9BVP2-2 Guanine nucleotide-binding protein-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20137.20137.5 32.35 32.35 1.165 10 1 1 0 1196.121 5896.6111 S490s Hydrogen 480 (R) KQEEREDDKDsDQETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTR (S) KQEEREDDKDS(0.99)DQET(0.0)VDEEVDENS(0.0)S(0.0)GMFAAEET(0.0)GEALS(0.0)EET(0.0)T(0.0)AGEQS(0.0)T(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S GNL3 62505.6 7 1 3772.1 43.42 HUMAN 1 -0.506 23.3393 EREEYRKSWSTATSP-p Q9UPQ0-4;S297-p EREEYRKSWSTATSP 0.327394528659194 0.27447854700426 0.17 0.131333333333333 9.07484063546196 7.3982071872886 0.17 0.131333333333333 0.123741659615494 0.182045220508839 1.82131907835525 1.53010572080289 Q9UPQ0 LIMCH1 Q9UPQ0.4.S297.p_LIMCH1 Q9UPQ0-4_S297s _1_1_297_297 Q9UPQ0-4 Q9UPQ0|Q9UPQ0-4|Q9UPQ0-2|Q9UPQ0-10|Q9UPQ0-9|Q6NVB9|D6RJ93 Isoform 4 of LIM and calponin homology domains-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19191.19191.3 17.14 17.14 3.266 5 1 1 0 686.6724 1978.0344 S297s TMT10 297 (K) sWSTATSPLGGERPFR (S) S(0.99)WS(0.0)T(0.0)AT(0.0)S(0.0)PLGGERPFR s:Phosphorylated S LIMCH1 121463.5 1 7 679.1 246.52 HUMAN 1 9.0748 7.3982 EREFDEDSDEKEEEE-p O43719;S624-p EREFDEDSDEKEEEE 0.211332022376932 0.0111957365018767 -0.438 0.702666666666667 13.0293145132897 27.3201825008428 -0.438 0.702666666666667 0.0497815653576819 0.00185345373525596 -2.51635058533817 5.64852558790045 O43719 HTATSF1 O43719.S624.p_HTATSF1 O43719_S624s _1_1_624_624 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11737.11737.3 16.88 16.88 9.819 3 1 1 0 935.3952 2724.1936 S624s Hydrogen 619 (R) EFDEDsDEKEEEEDTYEK (V) EFDEDS(0.99)DEKEEEEDT(0.0)Y(0.0)EK K:TMT10-Lys-Only,s:Phosphorylated S HTATSF1 86421.8 4 12 149.1 512 HUMAN 1 -13.0293 27.3202 EREGWPNSPYGVSKL-p O75828;S192-p EREGWPNSPYGVSKL 0.694547639896398 0.286266810510293 0.0873333333333333 0.133 2.97107167873069 7.16653546710238 0.0873333333333333 0.133 0.504536781117252 0.192019994664984 0.714530481742628 1.48971259927107 O75828 CBR3 O75828.S192.p_CBR3 O75828_S192s _1_1_192_192 O75828 O75828 Carbonyl reductase [NADPH] 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17918.17918.3 9.94 10.26 4.015 3 1 1 0 620.3094 1778.9478 S192s TMT10 187 (R) EGWPNsPYGVSK (L) EGWPNS(0.99)PY(0.0)GVS(0.0)K K:TMT10,s:Phosphorylated S CBR3 31249.1 2 1 6731.1 9.94 HUMAN 1 2.9711 7.1665 EREIFSGSLRTQTHP-p Q68DQ2;S177-p EREIFSGSLRTQTHP 0.340460379087942 0.0340474106016949 0.232666666666667 -0.385333333333333 8.70497155270561 19.7856333412296 0.232666666666667 -0.385333333333333 0.134741955122562 0.010505982326341 1.75729298259429 -3.82956071581634 Q68DQ2 CRYBG3 Q68DQ2.S177.p_CRYBG3 Q68DQ2_S177s _1_1_177_177 Q68DQ2 Q68DQ2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17388.17388.2 9.33 4.01 1.317 2 1 1 0 609.3101 1137.6465 S177s TMT10 172 (R) EIFSGsLR (T) EIFS(0.0)GS(0.99)LR s:Phosphorylated S CRYBG3 333308.2 1 1 582.1 265.87 HUMAN 1 8.705 -19.7856 ERENLMGSVRKDIES-p E9PCW1;S139-p ERENLMGSVRKDIES 0.339717080133774 0.110553247115818 -0.232333333333333 -0.253333333333333 8.72360559256795 12.6275006458771 -0.232333333333333 -0.253333333333333 0.134165063563151 0.0546072033799842 -1.76051864080158 -2.44286152996373 E9PCW1 GOSR1 E9PCW1.S139.p_GOSR1 E9PCW1_S139s _1_1_139_139 E9PCW1 O95249|E9PCW1|K7EJC8|O95249-2|B4DQA8 Golgi SNAP receptor complex member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8330.8330.4 11.6 11.6 99 1 1 1 0 465.0013 1777.0155 S139s TMT10 132 (R) ERENLMGsVRK (D) ERENLMGS(1.0)VRK K:TMT10,s:Phosphorylated S GOSR1 28406.9 3 3 2289.1 89.56 HUMAN 1 -8.7236 -12.6275 EREREDESEDESDIL-p Q9NSY0;S22-p EREREDESEDESDIL 0.306684187031916 0.30875214998813 0.156333333333333 0.160333333333333 9.60656647377534 6.74563971890391 0.156333333333333 0.160333333333333 0.109482158865344 0.211561203111014 1.9134310710514 1.41603406637478 Q9NSY0 NRBP2 Q9NSY0.S22.p_NRBP2 Q9NSY0_S22s _1_1_22_22 Q9NSY0 Q9NSY0 Nuclear receptor-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12198.12198.3 20.6 20.6 2.141 3 1 1 0 897.3714 2610.1311 S22s TMT10 17 (R) EREDEsEDESDILEESPCGR (W) EREDES(0.99)EDES(0.0)DILEES(0.0)PCGR C:Carbamidomethylation,s:Phosphorylated S NRBP2 58315.5 3 1 2343.1 87.17 HUMAN 1 9.6066 6.7456 ERERLGNSHQPEKPL-p P49959;S355-p ERERLGNSHQPEKPL 0.284624083844881 0.0301337338809123 0.255333333333333 0.4 10.2971657195164 20.5791029832201 0.255333333333333 0.4 0.0933863557388851 0.00875164518069699 2.03338890464012 4.00046657326141 P49959 MRE11A P49959.S355.p_MRE11A P49959_S355s _1_1_355_355 P49959 P49959-3|F8W7U8|P49959-2 Double-strand break repair protein MRE11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10169.10169.4 10.56 6.72 99 1 1 1 0 504.0328 1933.1384 S355s TMT10 352 (R) LGNsHQPEKPLVR (L) LGNS(1.0)HQPEKPLVR K:TMT10,s:Phosphorylated S MRE11 80934.2 1 4 588.1 264.48 HUMAN 1 10.2972 20.5791 ERERRDASEETSTSV-p Q9H0W8;S53-p ERERRDASEETSTSV 0.266431557797534 0.276706386437442 0.171 -0.122333333333333 10.8838544833511 7.35248462694955 0.171 -0.122333333333333 0.0815857953492031 0.183971918503665 2.13577379013874 -1.52214159172902 Q9H0W8 SMG9 Q9H0W8.S53.p_SMG9 Q9H0W8_S53s _1_1_53_53 Q9H0W8 Q9H0W8|Q9H0W8-2 Protein SMG9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12090.12090.2 18.35 18.35 3.371 5 1 1 0 975.9601 1870.9468 S53s TMT10 51 (R) DAsEETSTSVMQK (T) DAS(0.99)EET(0.0)S(0.0)T(0.0)S(0.0)VMQK K:TMT10,s:Phosphorylated S SMG9 57877.9 10 3 1449.1 140.87 HUMAN 1 10.8839 -7.3525 ERERRKRSMGGAAIA-p Q96I25;S169-p ERERRKRSMGGAAIA 0.247049795569645 0.020379930359248 -0.187666666666667 -0.455 11.5943833622135 23.1513464668834 -0.187666666666667 -0.455 0.0692726279956113 0.00484022280250057 -2.26058913621544 -4.5851179782314 Q96I25 RBM17 Q96I25.S169.p_RBM17 Q96I25_S169s _1_1_169_169 Q96I25 Q96I25 Splicing factor 45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24181.24181.3 18.78 18.78 18.782 3 1 1 0 689.7045 1987.1298 S169s TMT10 169 (R) sMGGAAIAPPTSLVEK (D) S(0.99)MGGAAIAPPT(0.0)S(0.0)LVEK K:TMT10,s:Phosphorylated S RBM17 45188.9 3 5 851.1 212.17 HUMAN 1 -11.5944 -23.1513 ERESAEQSSGPGPSL-p P48634;S192-p ERESAEQSSGPGPSL 0.0476372614756949 0.291338980704966 0.469 -0.116666666666667 29.3632722561348 7.06940755961191 0.469 -0.116666666666667 0.00115790458702516 0.196362812579875 6.24071275576253 -1.47274631492247 P48634 PRRC2A P48634.S192.p_PRRC2A P48634_S192s _1_1_192_192 P48634 P48634|P48634-3|P48634-2|P48634-4 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9136.9136.4 15.06 15.06 1.202 7 1 1 0 742.356 2886.4292 S192s TMT10 185 (K) ERESAEQsSGPGPSLRPQNSTTWR (D) ERES(0.0)AEQS(0.99)S(0.0)GPGPS(0.0)LRPQNS(0.0)T(0.0)T(0.0)WR s:Phosphorylated S PRRC2A 229315.4 1 5 36.1 882.05 HUMAN 1 29.3633 -7.0694 EREVDEDSEPEREVR-p Q53GS9;S82-p EREVDEDSEPEREVR 0.33180945295002 0.0276346695899257 0.136 0.323333333333333 8.94793574954996 21.1301191567774 0.136 0.323333333333333 0.127410853521254 0.00770882318182547 1.79935015984682 4.12165577782764 Q53GS9 USP39 Q53GS9.S82.p_USP39 Q53GS9_S82s _1_1_82_82 Q53GS9 Q53GS9|B9A018|Q53GS9-3|F8WC91 U4/U6.U5 tri-snRNP-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6136.6755.3 13.86 11.61 99 1 1 1 0 633.2838 1817.8715 S82s TMT10 77 (R) EVDEDsEPEREVR (A) EVDEDS(1.0)EPEREVR s:Phosphorylated S USP39 65778.7 6 2 1444.1 141.55 HUMAN 1 8.9479 21.1301 ERFVLMATPNLSRRN-p E7EUN2;T1048-p ERFVLMATPNLSRRN 0.633204865850603 0.126114215330185 0.0913333333333333 0.313333333333333 3.69658654950089 11.8574517009714 0.0913333333333334 0.313333333333333 0.426914931871532 0.0652010860646255 0.858668542952036 2.30594123464987 E7EUN2 NotFound E7EUN2.T1048.p_NotFound E7EUN2_T1048t _1_1_1048_1048 E7EUN2 E7EUN2|Q9UPQ3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26413.26413.3 15.74 15.74 7.09 2 1 1 0 519.9402 1477.8398 T1048t TMT10 1043 (R) FVLMAtPNLSR (R) FVLMAT(0.99)PNLS(0.0)R t:Phosphorylated T AGAP1 117700.5 1 15 1235.1 163.67 HUMAN 1 3.6966 11.8575 ERGDHNRTLDRSGDL-p O60716-3;T916-p ERGDHNRTLDRSGDL 0.546236180544102 0.227938708193828 -0.100333333333333 0.152666666666667 4.84817614325473 8.45969567874885 -0.100333333333333 0.152666666666667 0.327478193267407 0.142570749307253 -1.07616073267114 1.714250695098 O60716 CTNND1 O60716.3.T916.p_CTNND1 O60716-3_T916t _1_1_916_916 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-15|O60716-27|O60716-29|O60716-31|O60716-32|O60716-23|O60716-24|O60716-25|O60716-26|O60716-28|O60716-30 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12913.12913.3 8.81 6.12 1.247 2 1 1 0 922.1223 2684.3826 T916t TMT10 911 (R) GDHNRtLDRSGDLGDMEPLK (G) GDHNRT(0.99)LDRS(0.0)GDLGDMEPLK K:TMT10,t:Phosphorylated T CTNND1 105545.3 14 40 21.1 1014.17 HUMAN 1 -4.8482 8.4597 ERGKLPESPKRAEEI-p P17480;S484-p ERGKLPESPKRAEEI 0.164586423343969 0.0307602654618141 -0.322 0.586333333333333 15.6934081795693 20.4369492772902 -0.322 0.586333333333333 0.0269562317860295 0.0090428446969185 -3.0095403313523 3.96953974926164 P17480 UBTF P17480.S484.p_UBTF P17480_S484s _1_1_484_484 P17480 P17480|E9PKP7|P17480-2 Nucleolar transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25542.25755.5 19.65 17.06 12.118 3 1 1 0 728.3969 3558.0047 S484s TMT10 479 (R) GKLPEsPKRAEEIWQQSVIGDYLAR (F) GKLPES(0.99)PKRAEEIWQQS(0.0)VIGDY(0.0)LAR K:TMT10,s:Phosphorylated S UBTF 89746.7 6 7 1312.1 155.17 HUMAN 1 -15.6934 20.4369 ERGKLRQSLEELQRL-p Q6ZP65-2;S123-p ERGKLRQSLEELQRL 0.791213666020331 0.0261582417768877 -0.0396666666666667 -0.434666666666667 1.96376632847871 21.5135112623155 -0.0396666666666667 -0.434666666666667 0.636243512643263 0.00705746728700997 -0.500762798312625 -4.20723679997015 Q6ZP65 CCDC64 Q6ZP65.2.S123.p_CCDC64 Q6ZP65-2_S123s _1_1_123_123 Q6ZP65-2 Q6ZP65-2 Isoform 2 of BICD family-like cargo adapter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11575.11575.3 10.39 10.39 99 1 1 1 0 527.6168 1500.8696 S123s TMT10 120 (K) LRQsLEELQR (L) LRQS(1.0)LEELQR s:Phosphorylated S BICDL1 31170.4 1 1 6644.1 10.39 HUMAN 1 -1.9638 -21.5135 ERGKNEESLESTEGF-p Q9Y6J0;S1439-p ERGKNEESLESTEGF 0.0789448224408241 0.0061872699156182 0.475 0.492333333333333 23.5296960520786 31.8223869128799 0.475 0.492333333333333 0.00443639691676513 0.000657296483313835 4.68077547630919 6.99434766089297 Q9Y6J0 CABIN1 Q9Y6J0.S1439.p_CABIN1 Q9Y6J0_S1439s _1_1_1439_1439 Q9Y6J0 Q9Y6J0|A0A087WWW8|Q9Y6J0-2 Calcineurin-binding protein cabin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12473.12473.4 13.24 13.24 2.198 4 1 1 0 780.8781 3040.5224 S1439s TMT10 1425 (K) DLQGATEERGKNEEsLESTEGFR (A) DLQGAT(0.0)EERGKNEES(0.99)LES(0.0)T(0.0)EGFR K:TMT10,s:Phosphorylated S CABIN1 248858 2 6 763.1 229.21 HUMAN 1 23.5297 31.8224 ERGLSLDSFLRASRP-p Q8NC74;S265-p ERGLSLDSFLRASRP 0.109204251400589 0.110506057626177 0.343333333333333 -0.266666666666667 20.1437470778923 12.630803832779 0.343333333333333 -0.266666666666667 0.00967442789746395 0.0545656856478094 3.90986817266558 -2.44345233846342 Q8NC74 RBBP8NL Q8NC74.S265.p_RBBP8NL Q8NC74_S265s _1_1_265_265 Q8NC74 Q8NC74 RBBP8 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29964.29964.2 8.16 8.16 2.933 2 1 1 0 658.8459 1236.715 S265s TMT10 260 (R) GLSLDsFLR (A) GLS(0.0)LDS(0.99)FLR s:Phosphorylated S RBBP8NL 71886.7 1 9 565.1 270.89 HUMAN 1 20.1437 -12.6308 ERGNKACSPCSSQSS-p Q7Z6Z7;S3373-p ERGNKACSPCSSQSS 0.882249145108496 0.0353368157000986 -0.0223333333333333 -0.268333333333333 1.07145418866634 19.5427381730458 -0.0223333333333334 -0.268333333333333 0.781366128682142 0.011110310150828 -0.291707153926585 -3.77806442253573 Q7Z6Z7 HUWE1 Q7Z6Z7.S3373.p_HUWE1 Q7Z6Z7_S3373s _1_1_3373_3373 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36865.36865.4 15.35 8.65 2.141 8 1 1 0 808.3699 3150.4946 S3373s TMT10 3371 (K) ACsPCSSQSSSSGICTDFWDLLVK (L) ACS(0.99)PCS(0.0)S(0.0)QS(0.0)S(0.0)S(0.0)S(0.0)GICT(0.0)DFWDLLVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HUWE1 485818.9 8 53 11.1 1210.45 HUMAN 1 -1.0715 -19.5427 ERGQPGATGQPGPKG-p P25940;T847-p ERGQPGATGQPGPKG 0.886483152928741 0.329600189427322 -0.0226666666666667 0.130333333333333 1.02020895184008 6.38266979489841 -0.0226666666666667 0.130333333333333 0.790640587042199 0.230002745695507 -0.278939976334125 1.35211729952465 P25940 COL5A3 P25940.T847.p_COL5A3 P25940_S837sT847t_2_2_837_847 P25940 P25940 Collagen alpha-3(V) chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9307.9307.5 7.35 3.33 99 2 2 2 0 843.4229 4053.1469 S837s T847t TMT10 833 (R) GPPGsRGERGQPGAtGQPGPKGDVGQDGAPGIPGEK (G) GPPGS(1.0)RGERGQPGAT(1.0)GQPGPKGDVGQDGAPGIPGEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T COL5A3 172802.2 1 1 7184.1 7.35 HUMAN 1 -1.0202 6.3827 ERGQSQLSNPTDDSW-p Q9Y6D5;S1528-p ERGQSQLSNPTDDSW 0.505955843363506 0.0849489874738239 -0.091 0.350666666666667 5.46078510283883 14.1739036984038 -0.091 0.350666666666667 0.284394694188954 0.0382480792159183 -1.18786935865981 2.72324544417252 Q9Y6D5 ARFGEF2 Q9Y6D5.S1528.p_ARFGEF2 Q9Y6D5_S1528s _1_1_1528_1528 Q9Y6D5 Q9Y6D5 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15548.15548.2 18.01 18.01 1.609 4 1 1 0 1051.0043 2021.034 S1528s TMT10 1523 (R) GQSQLsNPTDDSWK (G) GQS(0.0)QLS(0.99)NPT(0.0)DDS(0.0)WK K:TMT10,s:Phosphorylated S ARFGEF2 204545.1 5 11 205.1 448.88 HUMAN 1 -5.4608 14.1739 ERGRHTPSIIFRRPE-p Q9BZD6;S163-p ERGRHTPSIIFRRPE 0.707522429944391 0.464610588211785 0.074 -0.0823333333333333 2.82366201194319 4.4395178076199 0.074 -0.0823333333333333 0.521955885276456 0.359789279945682 0.68436269379804 -1.00008205552008 Q9BZD6 PRRG4 Q9BZD6.S163.p_PRRG4 Q9BZD6_S163s _1_1_163_163 Q9BZD6 Q9BZD6 Transmembrane gamma-carboxyglutamic acid protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14198.14198.3 8.55 8.55 1.737 2 1 1 0 427.231 1199.7098 S163s TMT10 160 (R) HTPsIIFR (R) HT(0.0)PS(0.99)IIFR s:Phosphorylated S PRRG4 25745 1 2 3095.1 60.78 HUMAN 1 2.8237 -4.4395 ERGRLTPSPDIIVLS-p Q8WXI9;S122-p ERGRLTPSPDIIVLS 0.242519541519085 0.0455259854980451 0.172 0.240333333333333 11.7707040370076 17.9546547272694 0.172 0.240333333333333 0.0665165317171017 0.0160152796793447 2.29172870857307 3.45027841537398 Q8WXI9 GATAD2B Q8WXI9.S122.p_GATAD2B Q8WXI9_T120tS122s_2_2_120_122 Q8WXI9 Q8WXI9|A0A0U1RRM1 Transcriptional repressor p66-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21608.21608.3 16.8 16.8 8.786 5 2 2 0 795.3697 2224.1568 T120t S122s Hydrogen 117 (R) GRLtPsPDIIVLSDNEASSPR (S) GRLT(0.99)PS(0.99)PDIIVLS(0.0)DNEAS(0.0)S(0.0)PR t:Phosphorylated T,s:Phosphorylated S GATAD2B 65601.9 17 9 870.1 209.9 HUMAN 2 11.7707 17.9547 ERGSGGSSGDELRED-p Q7Z4V5-4;S370-p ERGSGGSSGDELRED 0.886247690131767 0.00985022343060253 0.0443333333333333 1.034 1.02313968457981 28.235226007086 0.0443333333333333 1.034 0.790107222081937 0.0015013342742034 0.279672744198961 5.9040049285595 Q7Z4V5 HDGFRP2 Q7Z4V5.4.S370.p_HDGFRP2 Q7Z4V5-4_S369sS370s_2_2_369_370 Q7Z4V5-4 Q7Z4V5-3|Q7Z4V5-4 Isoform 4 of Hepatoma-derived growth factor-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7969.7969.5 7.33 7.33 1.126 3 2 2 0 668.1019 3176.5456 S369s S370s TMT10 357 (R) ADRGEAERGSGGssGDELREDDEPVK (K) ADRGEAERGS(0.0)GGS(0.99)S(0.99)GDELREDDEPVK K:TMT10,s:Phosphorylated S HDGFL2 74899.1 7 16 712.1 238.42 HUMAN 1 1.0231 28.2352 ERGSRPASPAAKLPA-p Q9P2N6;S515-p ERGSRPASPAAKLPA 0.237800187730078 0.00675137454059323 0.245666666666667 0.517 11.948751999877 31.1676860461655 0.245666666666667 0.517 0.0638446925631577 0.000764242869497768 2.32324791494608 6.78410516382301 Q9P2N6 KANSL3 Q9P2N6.S515.p_KANSL3 Q9P2N6_S515s _1_1_515_515 Q9P2N6 Q9P2N6|Q9P2N6-3|Q9P2N6-4|Q9P2N6-5|Q9P2N6-2|Q9P2N6-6|Q9P2N6-8 KAT8 regulatory NSL complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13665.13665.4 24.28 22.49 1.116 13 1 1 0 916.9687 3584.8808 S515s Hydrogen 510 (R) GSRPAsPAAKLPASPSGSEDLSSVSSSPTSSPK (T) GS(0.0)RPAS(0.99)PAAKLPAS(0.0)PS(0.0)GS(0.0)EDLS(0.0)S(0.0)VS(0.0)S(0.0)S(0.0)PT(0.0)S(0.0)S(0.0)PK K:TMT10-Lys-Only,s:Phosphorylated S KANSL3 96617.6 9 2 1437.1 142.47 HUMAN 1 11.9488 31.1677 ERGVAENSVVISNGD-p P38432;S94-p ERGVAENSVVISNGD 0.681659995508636 0.0121085157327048 -0.071 -0.709 3.12221230912368 26.7728958551436 -0.071 -0.709 0.48728020487148 0.00210237611779755 -0.745127543055965 -5.49976320140278 P38432 COIL P38432.S94.p_COIL P38432_S94s _1_1_94_94 P38432 P38432 Coilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22162.22162.3 17.59 17.59 6.776 3 1 1 0 875.1469 2543.4557 S94s TMT10 89 (R) GVAENsVVISNGDINLSLRK (A) GVAENS(0.99)VVIS(0.0)NGDINLS(0.0)LRK K:TMT10,s:Phosphorylated S COIL 63291.8 3 1 395.1 330.42 HUMAN 1 -3.1222 -26.7729 ERHIMDRTPEKLKKE-p O75815;T130-p ERHIMDRTPEKLKKE 0.111791883498231 0.00212228854410704 0.475666666666667 -0.912666666666667 19.8759451937258 41.5542230089867 0.475666666666667 -0.912666666666667 0.010289765574987 6.99161811768609e-05 3.85237731041429 -10.8530072044348 O75815 BCAR3 O75815.T130.p_BCAR3 O75815_T130t _1_1_130_130 O75815 O75815|O75815-3 Breast cancer anti-estrogen resistance protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6378.6378.3 10.76 7.24 99 1 1 1 0 555.6251 1584.8932 T130t TMT10 125 (R) HIMDRtPEK (L) HIMDRT(1.0)PEK K:TMT10,t:Phosphorylated T BCAR3 93533.8 5 3 401.1 327.42 HUMAN 1 19.8759 -41.5542 ERHKRTHSGEKPYKC-p Q9Y2X9;S340-p ERHKRTHSGEKPYKC 0.518663523779988 0.00298089814036961 -0.143333333333333 -0.64 5.26844130377932 37.9782353758018 -0.143333333333333 -0.64 0.29727327632097 0.000159285580433417 -1.15303169006406 -9.25815096931997 Q9Y2X9 ZNF281 Q9Y2X9.S340.p_ZNF281 Q9Y2X9_S340s _1_1_340_340 Q9Y2X9 Q5SVQ8|Q9Y2X9|Q9Y2X9-2|Q9UC07|Q147U1|Q7Z3I7|Q8NDP4|A6NJL1|A0A0C4DG37|Q147U1-3 Zinc finger protein 281 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5705.5705.3 9.6 2.25 2.414 3 1 1 0 605.3323 1734.0153 S340s TMT10 338 (R) THsGEKPYK (C) T(0.0)HS(0.99)GEKPY(0.0)K K:TMT10,s:Phosphorylated S ZNF281 97654.7 2 8 1522.1 134.23 HUMAN 1 -5.2684 -37.9782 ERHKRVHSGEKPYQC-p Q8NDX6;S152-p ERHKRVHSGEKPYQC 0.170677699585152 0.00295295766305267 0.365 -0.799 15.3243636267144 38.1272251809628 0.365 -0.799 0.0293469949503734 0.000153913772085 2.93951012774176 -9.32009875168685 Q8NDX6 ZNF740 Q8NDX6.S152.p_ZNF740 Q8NDX6_S152s _1_1_152_152 Q8NDX6 Q8NDX6 Zinc finger protein 740 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5065.5065.4 12.9 11.69 8.048 2 1 1 0 507.7509 1948.0111 S152s TMT10 150 (R) VHsGEKPYQCER (C) VHS(0.99)GEKPY(0.0)QCER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF740 22484.2 2 3 2891.1 66.71 HUMAN 1 15.3244 -38.1272 ERHPSWRSEETQERE-p P23588;S409-p ERHPSWRSEETQERE 0.43497101841619 0.0249360838535382 -0.257666666666667 -0.423666666666667 6.66039563598418 21.8127052964271 -0.257666666666667 -0.423666666666667 0.215754785071476 0.00658763412136421 -1.40142625565581 -4.27475982173623 P23588 EIF4B P23588.S409.p_EIF4B P23588_S409s _1_1_409_409 P23588 E7EX17|P23588|P23588-2 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3821.3821.5 13.51 13.51 11.081 3 1 1 0 485.0308 2341.1595 S409s TMT10 402 (R) ERHPSWRsEETQERER (S) ERHPS(0.0)WRS(0.99)EET(0.0)QERER s:Phosphorylated S EIF4B 69207 1 13 146.1 516.36 HUMAN 1 -6.6604 -21.8127 ERILPALSKDKEEEI-p P19634;S624-p ERILPALSKDKEEEI 0.256626955344017 0.00203605351766751 -0.296 1.05366666666667 11.2209780645661 41.974356741116 -0.296 1.05366666666667 0.0754922194237005 6.34693902234804e-05 -2.19486894415264 11.0560550637019 P19634 SLC9A1 P19634.S624.p_SLC9A1 P19634_S624s _1_1_624_624 P19634 P19634 Sodium/hydrogen exchanger 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24310.24310.2 9.37 2.86 99 1 1 1 0 640.3922 1199.8128 S624s TMT10 619 (R) ILPALsK (D) ILPALS(1.0)K K:TMT10,s:Phosphorylated S SLC9A1 91274.8 1 3 732.1 235.73 HUMAN 1 -11.221 41.9744 ERIPRPLSPTKLLPF-p Q13625-3;S704-p ERIPRPLSPTKLLPF 0.804425819113358 0.204374556072908 -0.0466666666666667 -0.173666666666667 1.82250890490549 9.07087844036648 -0.0466666666666667 -0.173666666666667 0.657278020310831 0.123854604250434 -0.469126443483249 -1.81997278990512 Q13625 TP53BP2 Q13625.3.S704.p_TP53BP2 Q13625-3_S704s _1_1_704_704 Q13625-3 Q13625-3|Q13625-2 Isoform 3 of Apoptosis-stimulating of p53 protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14535.14535.2 9.24 9.24 1.314 2 1 1 0 773.9596 1466.9459 S704s TMT10 699 (R) IPRPLsPTK (L) IPRPLS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S TP53BP2 127005.7 4 8 834.1 215.28 HUMAN 1 -1.8225 -9.0709 ERISLAWSPITSLMW-p Q9NXC5;S361-p ERISLAWSPITSLMW 0.864241432695153 0.647531431687714 -0.0396666666666667 0.0543333333333333 1.23572392815901 2.57329498226987 -0.0396666666666667 0.0543333333333334 0.752363307815217 0.552930442977502 -0.332005104497625 0.632244514390972 Q9NXC5 MIOS Q9NXC5.S361.p_MIOS Q9NXC5_S361s _1_1_361_361 Q9NXC5 Q9NXC5|Q9NXC5-2 GATOR complex protein MIOS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.37180.37180.3 10.74 10.74 1.83 4 1 1 0 753.3732 2178.1401 S361s TMT10 356 (R) ISLAWsPITSLMWACGR (H) IS(0.0)LAWS(0.99)PIT(0.0)S(0.0)LMWACGR C:Carbamidomethylation,s:Phosphorylated S MIOS 100294.3 1 1 4676.1 28.11 HUMAN 1 -1.2357 2.5733 ERKARRISVTSKVQA-p Q8N5C8;S645-p ERKARRISVTSKVQA 0.454552510629112 0.256027205176725 -0.128333333333333 0.204 6.31574063851768 7.79329846762976 -0.128333333333333 0.204 0.233574773375454 0.166214976770454 -1.34062119797971 1.59878869076963 Q8N5C8 TAB3 Q8N5C8.S645.p_TAB3 Q8N5C8_S645s _1_1_645_645 Q8N5C8 Q8N5C8|Q8N5C8-2|Q96NR3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5146.5146.2 8.68 8.68 2.356 3 1 1 0 550.3077 1019.6411 S645s Hydrogen 643 (R) RIsVTSK (V) RIS(0.99)VT(0.0)S(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S TAB3 79423.2 2 11 1606.99 128.05 HUMAN 1 -6.3157 7.7933 ERKASSPSPLTIGTP-p Q9NPI6;S525-p ERKASSPSPLTIGTP 0.193104490434051 0.915191041038432 -0.212333333333333 -0.0183333333333333 13.9442947318305 0.541292418466755 -0.212333333333333 -0.0183333333333333 0.0403246425925611 0.882817143461227 -2.68269659371744 -0.154482214189262 Q9NPI6 DCP1A Q9NPI6.S525.p_DCP1A Q9NPI6_S525s _1_1_525_525 Q9NPI6 Q9NPI6|Q9NPI6-2 mRNA-decapping enzyme 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20456.20456.4 19.46 19.46 1.344 8 1 1 0 816.2188 3181.8763 S525s TMT10 521 (K) ASSPsPLTIGTPESQRKPSIILSK (S) AS(0.0)S(0.0)PS(0.99)PLT(0.0)IGT(0.0)PES(0.0)QRKPS(0.0)IILS(0.0)K K:TMT10,s:Phosphorylated S DCP1A 63479.5 6 13 344.1 352.95 HUMAN 1 -13.9443 -0.5413 ERKERLESLNIQREK-p Q14152;S584-p ERKERLESLNIQREK 0.0519571788354811 0.00100708685169879 -0.986666666666667 -1.75133333333333 28.024078910952 52.2233273399779 -0.986666666666667 -1.75133333333333 0.00157613026654568 5.99331723304869e-06 -5.85275634752992 -17.2742153646273 Q14152 EIF3A Q14152.S584.p_EIF3A Q14152_S584s _1_1_584_584 Q14152 Q14152|Q14152-2 Eukaryotic translation initiation factor 3 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17278.17278.2 13.42 3.6 99 1 1 1 0 641.3423 1201.7102 S584s TMT10 582 (R) LEsLNIQR (E) LES(1.0)LNIQR s:Phosphorylated S EIF3A 166965.8 6 4 1342.1 151.61 HUMAN 1 -28.0241 -52.2233 ERKHRHESGDSRERP-p Q6KC79;S874-p ERKHRHESGDSRERP 0.342075757494071 0.0302859718373368 0.784666666666667 -1.34466666666667 8.65788751273539 20.5414436505641 0.784666666666667 -1.34466666666667 0.136210707498168 0.00882786402116542 1.74914223981675 -3.99226011736661 Q6KC79 NIPBL Q6KC79.S874.p_NIPBL Q6KC79_S874s _1_1_874_874 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.2297.2297.4 10.11 4.88 2.121 2 1 1 0 437.4748 1666.9138 S874s TMT10 869 (R) KHRHEsGDSR (E) KHRHES(0.99)GDS(0.0)R K:TMT10,s:Phosphorylated S NIPBL 318099.5 2 18 50.1 752.87 HUMAN 1 8.6579 -20.5414 ERKINAGSQDDEMGC-p A0A087X0M4;S275-p ERKINAGSQDDEMGC 0.80064254088907 0.152259254575632 0.037 0.189666666666667 1.85893599234693 10.7488852225078 0.037 0.189666666666667 0.65178806050074 0.0841611144564297 0.477330717705002 2.11124515526761 A0A087X0M4 NotFound A0A087X0M4.S275.p_NotFound A0A087X0M4_S275s_1_1_275_275 A0A087X0M4 Q9BWU0|A0A087X0M4 Kanadaptin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30791.30791.4 16.94 16.94 3.664 2 1 1 0 1238.7949 4871.2123 S275s N298n TMT10 270 (R) KINAGsQDDEMGCTWGMGEDAVEDDAEEnPIVLEFQQER (E) KIN(0.0)AGS(0.99)QDDEMGCT(0.0)WGMGEDAVEDDAEEN(0.99)PIVLEFQQER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated SLC4A1AP 83630.7 2 4 455.1 307.39 HUMAN 1 1.8589 10.7489 ERKKACLSALSEVKV-p P42356;S1763-p ERKKACLSALSEVKV 0.0515638782216539 0.0155839287023174 -0.490666666666667 -0.355333333333333 28.1674956092037 24.9848352904761 -0.490666666666667 -0.355333333333333 0.00152493186337843 0.00317333901287772 -5.89338392849697 -5.03365937306442 P42356 NotFound P42356.S1763.p_NotFound P42356_S1763s _1_1_1763_1763 P42356 P42356|P42356-2 Phosphatidylinositol 4-kinase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22025.22025.2 12.28 12.28 2.255 2 1 1 0 808.4286 1535.8867 S1763s TMT10 1760 (K) ACLsALSEVK (V) ACLS(0.99)ALS(0.0)EVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PI4KA 239393.6 3 16 1109.1 176.13 HUMAN 1 -28.1675 -24.9848 ERKLGDVSPTQIDVS-p P46821;S1501-p ERKLGDVSPTQIDVS 0.119570568648901 0.0241902258364366 -0.389333333333333 0.315666666666667 19.1935025469398 22.0246832986014 -0.389333333333333 0.315666666666667 0.0120406448123478 0.0062738144497346 -3.70796516776976 4.32299797960622 P46821 MAP1B P46821.S1501.p_MAP1B P46821_S1501s _1_1_1501_1501 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27611.27611.3 11.98 7.67 1.73 5 1 1 0 1055.8801 3085.6661 S1501s TMT10 1497 (K) LGDVsPTQIDVSQFGSFKEDTK (M) LGDVS(0.99)PT(0.0)QIDVS(0.0)QFGS(0.0)FKEDT(0.0)K K:TMT10,s:Phosphorylated S MAP1B 271827.6 5 14 210.1 442.48 HUMAN 1 -19.1935 22.0247 ERKLRPVSPEEIRRS-p Q08AE8;S387-p ERKLRPVSPEEIRRS 0.453195332145344 0.262600243524549 -0.113666666666667 -0.116 6.34166184693879 7.65050922171064 -0.113666666666667 -0.116 0.232184816093567 0.171770696968626 -1.34520745688028 -1.57399176140497 Q08AE8 SPIRE1 Q08AE8.S387.p_SPIRE1 Q08AE8_S387s _1_1_387_387 Q08AE8 Q08AE8|Q08AE8-2|Q08AE8-5|Q08AE8-3|J3KNG6|Q08AE8-4 Protein spire homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9489.9489.4 10.53 10.53 99 1 1 1 0 415.9829 1580.9434 S387s TMT10 383 (K) LRPVsPEEIRR (S) LRPVS(1.0)PEEIRR s:Phosphorylated S SPIRE1 86683.2 5 2 1694.1 120.62 HUMAN 1 -6.3417 -7.6505 ERKNYKSSPEIQEPI-p Q9P260-2;S244-p ERKNYKSSPEIQEPI 0.123781235897274 0.00577906652466547 -0.505 0.562666666666667 18.8587371826533 32.3646147044407 -0.505 0.562666666666667 0.0130054768908379 0.00058014763953493 -3.63819065575588 7.17253087935367 Q9P260 KIAA1468 Q9P260.2.S244.p_KIAA1468 Q9P260-2_S244s _1_1_244_244 Q9P260-2 Q9P260-2|A0A075B785 Isoform 2 of LisH domain and HEAT repeat-containing protein KIAA1468 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18625.18625.3 16.82 16.82 1.106 2 1 1 0 788.1128 2282.3575 S244s TMT10 243 (K) SsPEIQEPIKPLEK (R) S(0.0)S(0.99)PEIQEPIKPLEK K:TMT10,s:Phosphorylated S KIAA1468 139711.8 1 7 724.1 236.86 HUMAN 1 -18.8587 32.3646 ERKRRPPSPEPSTKV-p A0A087WUZ3;S2104-p ERKRRPPSPEPSTKV 0.420320976430283 0.763807024415839 0.124 -0.0416666666666666 6.94401317817192 1.61633497293692 0.124 -0.0416666666666666 0.202115063399981 0.689233697832117 1.45120941385534 -0.422008720129978 A0A087WUZ3 NotFound A0A087WUZ3.S2104.p_NotFound A0A087WUZ3_S2104s _1_1_2104_2104 A0A087WUZ3 A0A087WUZ3|Q01082|Q01082-2|Q01082-3 Spectrin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14829.14829.5 28.81 25.1 4.934 9 1 1 0 1066.9301 5250.6506 S2104s TMT10 2101 (R) RPPsPEPSTKVSEEAESQQQWDTSKGEQVSQNGLPAEQGSPR (M) RPPS(0.99)PEPS(0.0)T(0.0)KVS(0.0)EEAES(0.0)QQQWDT(0.0)S(0.0)KGEQVS(0.0)QNGLPAEQGS(0.0)PR K:TMT10,s:Phosphorylated S SPTBN1 275623.3 24 11 233.1 420.49 HUMAN 1 6.944 -1.6163 ERKRRSPSPKPTKVH-p Q15287;S157-p ERKRRSPSPKPTKVH 0.0636603099033149 0.208852488679825 0.772666666666667 -0.192666666666667 25.8299382115949 8.94683658462094 0.772666666666667 -0.192666666666667 0.0026121985186826 0.127443104279969 5.2570925586543 -1.79851710325548 Q15287 RNPS1 Q15287.S157.p_RNPS1 Q15287_S155sS157s_2_2_155_157 Q15287 Q15287|Q15287-2|Q15287-3|H3BMS0|H3BV80 RNA-binding protein with serine-rich domain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3382.3382.4 10.74 10.74 10.736 3 2 2 0 443.7397 1612.0059 S155s S157s Hydrogen 153 (K) RRsPsPKPTK (V) RRS(0.99)PS(0.99)PKPT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S RNPS1 34207.7 29 5 2314.1 88.32 HUMAN 1 25.8299 -8.9468 ERKSSEASPTAQRSK-p Q7Z569;S97-p ERKSSEASPTAQRSK 0.0787840769166688 0.0200510267309114 0.548333333333333 -0.474333333333333 23.5481120709822 23.2741632488407 0.548333333333333 -0.474333333333333 0.00441762444931336 0.00470526052812422 4.68520926343626 -4.61429230674159 Q7Z569 BRAP Q7Z569.S97.p_BRAP Q7Z569_S97s _1_1_97_97 Q7Z569 Q7Z569|J3KNN7 BRCA1-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3747.3747.2 11.02 4.15 1.385 4 1 1 0 850.4422 1619.9117 S97s TMT10 92 (R) KSSEAsPTAQR (S) KS(0.0)S(0.0)EAS(0.99)PT(0.0)AQR K:TMT10,s:Phosphorylated S BRAP 68615.7 4 4 1332.1 153 HUMAN 1 23.5481 -23.2742 ERLAEAPSPAPTPSP-p A0A0G2JPP5;S1541-p ERLAEAPSPAPTPSP 0.515788285091616 0.0654044961461682 0.116666666666667 0.222 5.30964330009206 15.7594534180602 0.116666666666667 0.222 0.294466347846911 0.0265493967876202 1.16051123686678 3.02004356968874 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1541.p_SCRIB A0A0G2JPP5_S1541s _1_1_1541_1541 A0A0G2JPP5 Q14160-3|A0A0G2JPP5 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23792.23818.4 27.97 29.52 3.317 9 1 1 0 998.5255 3911.1166 S1541s TMT10 1536 (R) LAEAPsPAPTPSPTPVEDLGPQTSTSPGRLPLSGK (K) LAEAPS(0.99)PAPT(0.0)PS(0.0)PT(0.0)PVEDLGPQT(0.0)S(0.0)T(0.0)S(0.0)PGRLPLS(0.0)GK K:TMT10,s:Phosphorylated S SCRIB 178690.9 3 39 22.1 1004.81 HUMAN 1 5.3096 15.7595 ERLAQYESKKAKKPA-p P24534;S128-p ERLAQYESKKAKKPA 0.551730002887042 0.0369181497054097 0.0846666666666667 -0.379 4.76618399640235 19.2642467136454 0.0846666666666667 -0.379 0.33371951239872 0.0118460982045458 1.06103054727206 -3.71948044777126 P24534 EEF1B2 P24534.S128.p_EEF1B2 P24534_S128s _1_1_128_128 P24534 P24534 Elongation factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12323.12323.2 11.08 3.87 7.844 2 1 1 0 688.8647 1296.7564 S128s TMT10 123 (R) LAQYEsK (K) LAQY(0.0)ES(0.99)K K:TMT10,s:Phosphorylated S EEF1B2 24934.4 1 5 484.1 296.88 HUMAN 1 4.7662 -19.2642 ERLELKASPNVEAPQ-p P50851;S1261-p ERLELKASPNVEAPQ 0.359587234496276 0.885493702836764 0.131666666666667 -0.0303333333333333 8.25333224266749 0.742460780015167 0.131666666666667 -0.0303333333333333 0.149508806886101 0.842857046538868 1.67908078897103 -0.207948484424802 P50851 LRBA P50851.S1261.p_LRBA P50851_S1261s_1_1_1261_1261 P50851 P50851|P50851-2 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20610.20610.5 9.04 9.04 1.173 4 1 1 0 725.9817 3544.9124 S1261s N1263n TMT10 1244 (K) LDVSNVATDTERLELKAsPnVEAPQPHR (H) LDVS(0.0)N(0.0)VAT(0.0)DT(0.0)ERLELKAS(0.99)PN(0.99)VEAPQPHR K:TMT10,s:Phosphorylated S,n:Deamidated LRBA 321783.7 1 12 74.1 649.16 HUMAN 1 8.2533 -0.7425 ERLFGHSSTSALSAI-p Q7Z6Z7;S3117-p ERLFGHSSTSALSAI 0.940646984077448 0.929892197726816 0.0113333333333333 0.01 0.522183517605344 0.445815709650913 0.0113333333333333 0.01 0.886710085606296 0.902440191545718 0.149318003069905 0.128427137789404 Q7Z6Z7 HUWE1 Q7Z6Z7.S3117.p_HUWE1 Q7Z6Z7_S3117s _1_1_3117_3117 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26962.26962.3 10.68 10.68 1.148 5 1 1 0 623.667 1789.0169 S3117s TMT10 3112 (R) LFGHSsTSALSAILR (S) LFGHS(0.0)S(0.99)T(0.0)S(0.0)ALS(0.0)AILR s:Phosphorylated S HUWE1 485818.9 1 49 11.1 1210.45 HUMAN 1 0.5222 0.4458 ERLKKMLSEGSVGEV-p Q9NSC5;S176-p ERLKKMLSEGSVGEV 0.780946211493183 0.099936180582509 0.0406666666666667 0.253333333333333 2.06340326353806 13.2216953543541 0.0406666666666667 0.253333333333333 0.621812822774719 0.047624503884902 0.522797809750703 2.549665520366 Q9NSC5 HOMER3 Q9NSC5.S176.p_HOMER3 Q9NSC5_S176sS179s_2_2_176_179 Q9NSC5 Q9NSC5|Q9NSC5-2|Q9NSC5-5 Homer protein homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35152.35152.4 15.33 15.33 15.33 3 2 2 0 948.458 3630.8717 S176s S179s TMT10 173 (K) KMLsEGsVGEVQWEAEFFALQDSNNK (L) KMLS(0.99)EGS(0.99)VGEVQWEAEFFALQDS(0.0)NNK K:TMT10,s:Phosphorylated S HOMER3 39835.6 2 6 1577.1 130.16 HUMAN 1 2.0634 13.2217 ERLKLSPSPSSRVTV-p P20700;S393-p ERLKLSPSPSSRVTV 0.298291057314039 0.0104679227872567 0.617666666666667 -0.508 9.87698046684936 27.7779243709335 0.617666666666667 -0.508 0.102873129884144 0.00166804423254849 1.96034547859987 -5.77525191216497 P20700 LMNB1 P20700.S393.p_LMNB1 P20700_S393s _1_1_393_393 P20700 Q03252|P20700 Lamin-B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12090.12090.2 11.38 11.38 1.237 4 1 1 0 805.4565 1529.9415 S393s TMT10 388 (R) LKLSPsPSSR (V) LKLS(0.0)PS(0.99)PS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S LMNB1 66692.5 9 11 440.1 312.01 HUMAN 1 9.877 -27.7779 ERLKQFVSQELVNL_-p Q5VST6;S282-p ERLKQFVSQELVNL_ 0.727948175722141 0.0759248791912698 0.0786666666666667 0.217666666666667 2.61679174195715 14.8608313064777 0.0786666666666666 0.217666666666667 0.547420208588561 0.0326525324217646 0.641442534152091 2.85055152310933 Q5VST6 ABHD17B Q5VST6.S282.p_ABHD17B Q5VST6_S282s _1_1_282_282 Q5VST6 Q5VST6 Protein ABHD17B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30174.30174.2 8.52 8.52 99 1 1 1 0 743.3797 1405.7888 S282s TMT10 279 (K) QFVsQELVNL (-) QFVS(1.0)QELVNL s:Phosphorylated S ABHD17B 32898.8 1 1 6954.1 8.52 HUMAN 1 2.6168 14.8608 ERLLATASFTKSSRS-p Q8WYP5-2;S2124-p ERLLATASFTKSSRS 0.0848925536936968 0.00805736289639179 0.371 -0.604 22.9247870220991 29.8276099751338 0.371 -0.604 0.00509942604533746 0.00104049261590177 4.53666953928027 -6.36982424417203 Q8WYP5 AHCTF1 Q8WYP5.2.S2124.p_AHCTF1 Q8WYP5-2_S2124s _1_1_2124_2124 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23180.23180.3 9.64 9.64 2 3 1 1 0 497.2856 1409.8768 S2124s TMT10 2119 (R) LLATAsFTK (S) LLAT(0.0)AS(0.99)FT(0.0)K K:TMT10,s:Phosphorylated S AHCTF1 258049.6 1 33 40.1 829.79 HUMAN 1 22.9248 -29.8276 ERLLHMDSDDEIPIR-p Q1MSJ5;S966-p ERLLHMDSDDEIPIR 0.974265885435344 0.0092691240563133 -0.00566666666666668 -0.430666666666667 0.221933756487952 28.7099603324962 -0.00566666666666668 -0.430666666666667 0.950181617890991 0.00134587264690487 -0.0654291244240709 -6.03999207383448 Q1MSJ5 CSPP1 Q1MSJ5.S966.p_CSPP1 Q1MSJ5_S966s _1_1_966_966 Q1MSJ5 Q1MSJ5|Q1MSJ5-1|Q1MSJ5-2 Centrosome and spindle pole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18467.18467.4 22.2 22.2 99 1 1 1 0 645.1078 2497.4415 S966s TMT10 961 (R) LLHMDsDDEIPIRKK (E) LLHMDS(1.0)DDEIPIRKK K:TMT10,s:Phosphorylated S CSPP1 145804.7 6 7 1677.1 121.74 HUMAN 1 -0.2219 -28.71 ERLMHLTSEELNPNP-p Q96RS6;S388-p ERLMHLTSEELNPNP 0.330213610050389 0.0500384684317076 0.274666666666667 0.423333333333333 8.99530900133548 17.3880044460072 0.274666666666667 0.423333333333333 0.126028596512241 0.018247339627249 1.80755078458743 3.33683513764057 Q96RS6 NUDCD1 Q96RS6.S388.p_NUDCD1 Q96RS6_S388s _1_1_388_388 Q96RS6 Q96RS6|Q96RS6-2 NudC domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20539.20599.3 14.61 14.61 1.136 2 1 1 0 759.3844 2196.1735 S388s TMT10 383 (R) LMHLTsEELNPNPDK (E) LMHLT(0.0)S(0.99)EELNPNPDK K:TMT10,s:Phosphorylated S NUDCD1 67553.4 2 1 4573.1 29.59 HUMAN 1 8.9953 17.388 ERLQEELSQAESTID-p Q14203;S417-p ERLQEELSQAESTID 0.176240941475 0.0219466301321615 -0.331 0.355 14.9777787405709 22.6682612025863 -0.331 0.355 0.0317849934260231 0.0054097086966912 -2.87428459436389 4.47152481326235 Q14203 DCTN1 Q14203.S417.p_DCTN1 Q14203_S417s _1_1_417_417 Q14203 Q14203|Q14203-6|E7EX90|Q14203-4|Q14203-3|Q14203-2 Dynactin subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.33127.33127.3 7.98 7.98 1.152 3 1 1 0 791.0724 2291.2382 S417s TMT10 412 (R) LQEELsQAESTIDELK (E) LQEELS(0.99)QAES(0.0)T(0.0)IDELK K:TMT10,s:Phosphorylated S DCTN1 142434.1 1 5 2852.1 68.06 HUMAN 1 -14.9778 22.6683 ERLQGEHSQNGEEEP-p Q5EBL4;S259-p ERLQGEHSQNGEEEP 0.764972901126843 0.10993748614828 -0.0536666666666667 0.213333333333333 2.23378906109507 12.6634824772167 -0.0536666666666667 0.213333333333333 0.597889730437146 0.0541566450346326 -0.559975644004418 2.44929894316569 Q5EBL4 RILPL1 Q5EBL4.S259.p_RILPL1 Q5EBL4_S259s _1_1_259_259 Q5EBL4 Q5EBL4 RILP-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14913.14913.3 19.68 19.68 7.02 4 1 1 0 1198.2148 3512.6553 S259s TMT10 254 (R) LQGEHsQNGEEEPETEPVGEESISDAEK (V) LQGEHS(0.99)QNGEEEPET(0.0)EPVGEES(0.0)IS(0.0)DAEK K:TMT10,s:Phosphorylated S RILPL1 47164.2 2 1 4502.1 30.64 HUMAN 1 -2.2338 12.6635 ERLQGPPTPAGKETE-p P78411;T237-p ERLQGPPTPAGKETE 0.076674626752473 0.0150452882196435 -0.365666666666667 0.397333333333333 23.9233452382818 25.215180108539 -0.365666666666667 0.397333333333333 0.00405196304825402 0.00300941436128623 -4.77616041578304 5.09205559438101 P78411 IRX5 P78411.T237.p_IRX5 P78411_T237t _1_1_237_237 P78411 P78411|P78411-2|P78411-3 Iroquois-class homeodomain protein IRX-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12891.12891.2 13.16 13.16 99 1 1 1 0 752.4204 1423.8673 T237t TMT10 232 (R) LQGPPtPAGK (E) LQGPPT(1.0)PAGK K:TMT10,t:Phosphorylated T IRX5 50702.2 4 2 1529.1 133.88 HUMAN 1 -23.9233 25.2152 ERLQRRRSRVFDLQF-p Q15003;S70-p ERLQRRRSRVFDLQF 0.202539113964214 0.250721462034085 0.200333333333333 -0.124333333333333 13.4544044121874 7.91604930851363 0.200333333333333 -0.124333333333333 0.0451397925429565 0.161582777521322 2.59327965612979 -1.62008612238919 Q15003 NCAPH Q15003.S70.p_NCAPH Q15003_S70s _1_1_70_70 Q15003 Q15003|E9PHA2 Condensin complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20402.20402.3 13.32 13.32 4.841 4 1 1 0 655.3213 1883.9813 S70s TMT10 70 (R) sRVFDLQFSTDSPR (L) S(0.99)RVFDLQFS(0.0)T(0.0)DS(0.0)PR s:Phosphorylated S NCAPH 83360.5 1 3 558.1 272.98 HUMAN 1 13.4544 -7.916 ERLRKEFSPFGTITS-p P11940;S315-p ERLRKEFSPFGTITS 0.111075288137026 0.142456775632816 -0.546666666666667 -0.176333333333333 19.9512514915821 11.1515187425319 -0.546666666666667 -0.176333333333333 0.0101128799285874 0.0767093187362357 -3.86849621622831 -2.18167638888315 P11940 PABPC1 P11940.S315.p_PABPC1 P11940_S315s _1_1_315_315 P11940 P11940|E7ERJ7|E7EQV3|P11940-2|A0A087WTT1 Polyadenylate-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26805.26805.2 12.35 12.35 1.433 4 1 1 0 911.9727 1742.9729 S315s TMT10 313 (K) EFsPFGTITSAK (V) EFS(0.99)PFGT(0.0)IT(0.0)S(0.0)AK K:TMT10,s:Phosphorylated S PABPC1 70897.8 2 2 1996.2 103.46 HUMAN 1 -19.9513 -11.1515 ERLRLSPSPTSQRSR-p P02545;S392-p ERLRLSPSPTSQRSR 0.290027496028783 0.248085182483995 0.338333333333333 -0.205666666666667 10.1344914211883 7.9760010180765 0.338333333333333 -0.205666666666667 0.0969506796357507 0.159367550743807 2.00508620774427 -1.63048197182368 P02545 LMNA P02545.S392.p_LMNA P02545_S392s _1_1_392_392 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3807.3807.2 10.85 6.04 1.934 4 1 1 0 526.7426 972.5109 S392s Hydrogen 389 (R) LSPsPTSQR (S) LS(0.0)PS(0.99)PT(0.0)S(0.0)QR s:Phosphorylated S LMNA 74423.5 4 18 60.1 706.83 HUMAN 1 10.1345 -7.976 ERLVRSRSSDIVSSV-p Q14C86-6;S929-p ERLVRSRSSDIVSSV 0.878395260815069 0.206239833834715 0.0223333333333333 -0.181333333333333 1.1073642276173 9.02050112070468 0.0223333333333333 -0.181333333333333 0.774931968313943 0.125299658669864 0.300596947400708 -1.81125867092955 Q14C86 GAPVD1 Q14C86.6.S929.p_GAPVD1 Q14C86-6_S929s _1_1_929_929 Q14C86-6 Q14C86-6|Q14C86-2|Q14C86-5|Q14C86-4|Q14C86-3|F8W9S7 Isoform 6 of GTPase-activating protein and VPS9 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10900.10900.2 13.78 13.78 2.081 4 1 1 0 629.8161 1178.6578 S929s TMT10 929 (R) sSDIVSSVR (R) S(0.99)S(0.0)DIVS(0.0)S(0.0)VR s:Phosphorylated S GAPVD1 167648.8 6 12 268.1 394.98 HUMAN 1 1.1074 -9.0205 ERLVSELSGGTGGDE-p Q6UN15;S14-p ERLVSELSGGTGGDE 0.56314177400857 0.846851668954168 0.141 0.044 4.59265361775644 1.01460592544391 0.141 0.0440000000000001 0.347323875430885 0.79166128593439 1.02885111659316 0.277510780322332 Q6UN15 FIP1L1 Q6UN15.S14.p_FIP1L1 Q6UN15_S14sT17t_2_2_14_17 Q6UN15 A0A0B4J203|Q6UN15 Pre-mRNA 3'-end-processing factor FIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32051.32051.4 19.87 19.87 1.91 5 2 2 0 1047.4788 4026.9762 S14s T17t TMT10 9 (R) LVSELsGGtGGDEEEEWLYGGPWDVHVHSDLAK (D) LVS(0.0)ELS(0.99)GGT(0.99)GGDEEEEWLY(0.0)GGPWDVHVHS(0.0)DLAK K:TMT10,s:Phosphorylated S,t:Phosphorylated T FIP1L1 66639.3 2 13 404.1 326.66 HUMAN 1 4.5927 1.0146 ERMKVQGSPLKKLFT-p Q02952;S514-p ERMKVQGSPLKKLFT 0.0683636000573323 0.00227464949884667 -0.534 -1.52766666666667 25.1417790532253 40.8188363044738 -0.534 -1.52766666666667 0.00306070938129988 8.28164041199877e-05 -5.07977490919243 -10.5058676185865 Q02952 AKAP12 Q02952.S514.p_AKAP12 Q02952_S514s _1_1_514_514 Q02952 Q02952|Q02952-2|Q02952-3 A-kinase anchor protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10328.10328.3 9.9 6.11 99 1 1 1 0 541.9989 1544.0139 S514s TMT10 511 (K) VQGsPLKK (L) VQGS(1.0)PLKK K:TMT10,s:Phosphorylated S AKAP12 192048.9 1 3 2207.1 93.46 HUMAN 1 -25.1418 -40.8188 ERNASVYSPSGPVNR-p Q9NS56;S194-p ERNASVYSPSGPVNR 0.384868935248651 0.736627200064289 0.130333333333333 -0.0346666666666667 7.67638378767355 1.83013294728974 0.130333333333333 -0.0346666666666667 0.170750357341092 0.656125180530857 1.57896629995463 -0.470793265232082 Q9NS56 TOPORS Q9NS56.S194.p_TOPORS Q9NS56_S194s _1_1_194_194 Q9NS56 Q9NS56|Q9NS56-2 E3 ubiquitin-protein ligase Topors HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9162.9162.2 14.21 14.21 1.741 4 1 1 0 828.9006 1576.8281 S194s TMT10 189 (R) NASVYsPSGPVNR (R) NAS(0.0)VY(0.0)S(0.99)PS(0.0)GPVNR s:Phosphorylated S TOPORS 120222.5 6 4 580.1 266.48 HUMAN 1 7.6764 -1.8301 ERNDSWGSFDLRAAI-p Q7Z417;S655-p ERNDSWGSFDLRAAI 0.28377835512685 0.00933999081697987 -0.212 -0.690333333333333 10.3245364609997 28.6520587996558 -0.212 -0.690333333333333 0.0927996533437266 0.00136393640088153 -2.03815426641573 -6.02327749347193 Q7Z417 NUFIP2 Q7Z417.S655.p_NUFIP2 Q7Z417_S655s _1_1_655_655 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21172.21424.2 12.22 6.55 2.622 2 1 1 0 753.3347 1425.696 S655s TMT10 650 (R) NDSWGsFDLR (A) NDS(0.0)WGS(0.99)FDLR s:Phosphorylated S NUFIP2 76176.8 1 19 304.1 375.48 HUMAN 1 -10.3245 -28.6521 ERNILPMTPVWAPVP-p O95487-3;T567-p ERNILPMTPVWAPVP 0.522338757345402 0.0610999358357444 0.0846666666666667 0.264333333333333 5.21518762219391 16.1682462080434 0.0846666666666667 0.264333333333333 0.300940915475416 0.0241643645615342 1.14335014672836 3.09834444711035 O95487 SEC24B O95487.3.T567.p_SEC24B O95487-3_T567t _1_1_567_567 O95487-3 O95487-3|O95487-2 Isoform 3 of Protein transport protein Sec24B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36399.36399.3 17.35 17.35 99 1 1 1 0 914.5021 2661.5202 T567t TMT10 562 (R) NILPMtPVWAPVPNLNADLK (K) NILPMT(1.0)PVWAPVPNLNADLK K:TMT10,t:Phosphorylated T SEC24B 141616.6 1 4 1775.1 115.78 HUMAN 1 5.2152 16.1682 ERNKLQCSDTEQVEA-p P08910;S415-p ERNKLQCSDTEQVEA 0.449347026753219 0.20695534667209 -0.120333333333333 -0.135 6.41726067180267 8.9985226700815 -0.120333333333333 -0.135 0.228178085974618 0.125935373050868 -1.35857043952028 -1.80745703995741 P08910 ABHD2 P08910.S415.p_ABHD2 P08910_S415s _1_1_415_415 P08910 P08910 Monoacylglycerol lipase ABHD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17479.17479.3 10.8 10.8 1.166 2 1 1 0 806.3809 2337.1644 S415s TMT10 410 (R) NKLQCsDTEQVEADLE (-) NKLQCS(0.99)DT(0.0)EQVEADLE K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ABHD2 49112.8 2 1 5440.1 19.27 HUMAN 1 -6.4173 -8.9985 ERNLLQQSWEDMKRL-p Q8TDM6;S264-p ERNLLQQSWEDMKRL 0.560567639843939 0.793113910002499 -0.0786666666666667 0.041 4.63348444354378 1.40262491870642 -0.0786666666666667 0.041 0.344073761774078 0.72399823612738 -1.03644260954405 0.371992637083506 Q8TDM6 DLG5 Q8TDM6.S264.p_DLG5 Q8TDM6_S264s _1_1_264_264 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24574.24574.2 16.04 12.14 99 1 1 1 0 965.4796 1849.9882 S264s TMT10 259 (R) NLLQQsWEDMK (R) NLLQQS(1.0)WEDMK K:TMT10,s:Phosphorylated S DLG5 215575.4 21 3 34.1 890.58 HUMAN 1 -4.6335 1.4026 ERNRLYHSLGPVTRV-p Q86X27;S422-p ERNRLYHSLGPVTRV 0.601113862580168 0.0271768380068364 0.110333333333333 0.353333333333333 4.08340575097144 21.2421354390997 0.110333333333333 0.353333333333333 0.390534517281202 0.00751253409614211 0.93303947408506 4.14655178334088 Q86X27 RALGPS2 Q86X27.S422.p_RALGPS2 Q86X27_S422s _1_1_422_422 Q86X27 Q86X27 Ras-specific guanine nucleotide-releasing factor RalGPS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13435.13435.3 17.75 17.75 6.283 3 1 1 0 484.5921 1371.7946 S422s TMT10 419 (R) LYHsLGPVTR (V) LY(0.0)HS(0.99)LGPVT(0.0)R s:Phosphorylated S RALGPS2 65508.3 8 11 614.1 261.34 HUMAN 1 4.0834 21.2421 ERPAEDGSDEEDPDS-p Q9H6Y2;S14-p ERPAEDGSDEEDPDS 0.744690566487893 0.401309530980885 0.0646666666666667 0.13 2.42770617019167 5.27373321332107 0.0646666666666667 0.13 0.571780556459495 0.296911267292779 0.601567315617112 1.15374871925786 Q9H6Y2 WDR55 Q9H6Y2.S14.p_WDR55 Q9H6Y2_S14s _1_1_14_14 Q9H6Y2 Q9H6Y2|D6RGJ8 WD repeat-containing protein 55 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8980.8980.3 22.91 21.34 4.303 4 1 1 0 1083.0766 3167.247 S14s Acetyl 1 (-) MDRTCEERPAEDGsDEEDPDSMEAPTR (I) MDRT(0.0)CEERPAEDGS(0.99)DEEDPDS(0.0)MEAPT(0.0)R C:Carbamidomethylation,s:Phosphorylated S WDR55 42582.8 16 1 2434.1 83.56 HUMAN 1 2.4277 5.2737 ERPAGPGTPPPDSGP-p Q9P2K8;T667-p ERPAGPGTPPPDSGP 0.879967450767715 0.546812611298521 -0.023 0.086 1.09167680912298 3.52550874490338 -0.023 0.0860000000000001 0.777736209447362 0.44406763897288 -0.296719094789596 0.825141254517343 Q9P2K8 EIF2AK4 Q9P2K8.T667.p_EIF2AK4 Q9P2K8_T667t _1_1_667_667 Q9P2K8 Q9P2K8|Q9P2K8-2 eIF-2-alpha kinase GCN2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7989.7989.3 18.51 16.93 9.576 2 1 1 0 730.7034 2110.1243 T667t Hydrogen 659 (R) HERPAGPGtPPPDSGPLAK (D) HERPAGPGT(0.99)PPPDS(0.0)GPLAK K:TMT10-Lys-Only,t:Phosphorylated T EIF2AK4 188390.5 10 3 1647.1 123.7 HUMAN 1 -1.0917 3.5255 ERPELLGSFEDVLIR-p Q8N4Y2;S174-p ERPELLGSFEDVLIR 0.345788111527743 0.749705752304287 -0.135333333333333 -0.0333333333333333 8.56777999157094 1.72923649644372 -0.135333333333333 -0.0333333333333333 0.139066332303414 0.671546902637088 -1.73354243343112 -0.447918523707241 Q8N4Y2 CRACR2B Q8N4Y2.S174.p_CRACR2B Q8N4Y2_S174s _1_1_174_174 Q8N4Y2 Q8N4Y2|Q8N4Y2-3|Q8N4Y2-2 EF-hand calcium-binding domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28405.28405.3 7.68 7.68 99 1 1 1 0 694.6999 2002.1171 S174s TMT10 167 (R) ERPELLGsFEDVLIR (A) ERPELLGS(1.0)FEDVLIR s:Phosphorylated S CRACR2B 45640 1 2 4122.1 37.14 HUMAN 1 -8.5678 -1.7292 ERPGSRRSLPGSLSE-p Q5VWQ8;S53-p ERPGSRRSLPGSLSE 0.963118175966314 0.56139328956448 -0.00733333333333333 -0.056 0.313416483788402 3.37986204642885 -0.00733333333333334 -0.056 0.930375684714463 0.459212599485908 -0.0915151362651824 -0.7964445895551 Q5VWQ8 DAB2IP Q5VWQ8.S53.p_DAB2IP Q5VWQ8_S53s _1_1_53_53 Q5VWQ8 Q5VWQ8|Q5VWQ8-5 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13183.13183.2 10.64 10.64 6.503 3 1 1 0 613.8172 1146.6568 S53s Hydrogen 53 (R) sLPGSLSEK (S) S(0.99)LPGS(0.0)LS(0.0)EK K:TMT10-Lys-Only,s:Phosphorylated S DAB2IP 132592.9 6 1 281.1 388.28 HUMAN 1 -0.3134 -3.3799 ERPLQQVSPVASVPW-p Q9BY89;S1488-p ERPLQQVSPVASVPW 0.887353114485877 0.335654138491166 -0.0233333333333333 0.171666666666667 1.01234301251083 6.28398458423461 -0.0233333333333333 0.171666666666667 0.792073892458997 0.235288955376636 -0.27697168286613 1.33466773138901 Q9BY89 KIAA1671 Q9BY89.S1488.p_KIAA1671 Q9BY89_S1488s _1_1_1488_1488 Q9BY89 Q9BY89 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19360.19360.4 8.47 4.76 6.143 2 1 1 0 540.2892 2078.1708 S1488s TMT10 1481 (K) ERPLQQVsPVASVPWR (S) ERPLQQVS(0.99)PVAS(0.0)VPWR s:Phosphorylated S KIAA1671 197734.4 1 21 105.1 590.35 HUMAN 1 -1.0123 6.284 ERPPVEHSPEKQSPE-p Q15170-2;S28-p ERPPVEHSPEKQSPE 0.0719549135296335 0.0120116039877369 -0.708666666666667 0.753333333333333 24.6579397294786 26.824591530835 -0.708666666666667 0.753333333333334 0.00342141714276846 0.0020774991124489 -4.9576618505699 5.51368881409624 Q15170 TCEAL1 Q15170.2.S28.p_TCEAL1 Q15170-2_S28s _1_1_28_28 Q15170-2 Q15170-2 Isoform 2 of Transcription elongation factor A protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6354.6354.4 14.94 14.94 14.942 2 1 1 0 547.7735 2108.1024 S28s TMT10 18 (K) TDEERPPVEHsPEK (Q) T(0.0)DEERPPVEHS(0.99)PEK K:TMT10,s:Phosphorylated S TCEAL1 18697.6 1 1 5969.1 14.94 HUMAN 1 -24.6579 26.8246 ERPSGPESPVQGPRI-p Q9UMN6;S861-p ERPSGPESPVQGPRI 0.323069540271988 0.12821041353341 0.155666666666667 -0.205666666666667 9.18513060785857 11.7635428472428 0.155666666666667 -0.205666666666667 0.12063878072623 0.0666263029585786 1.84041471578499 -2.28934667978931 Q9UMN6 KMT2B Q9UMN6.S861.p_KMT2B Q9UMN6_S861s _1_1_861_861 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5302.5302.3 12.21 12.21 4.319 2 1 1 0 601.2987 1721.9132 S861s TMT10 854 (R) ERPSGPEsPVQGPR (I) ERPS(0.0)GPES(0.99)PVQGPR s:Phosphorylated S KMT2B 297845.7 3 10 388.1 332.76 HUMAN 1 9.1851 -11.7635 ERPSLEDTEPSDSGD-p Q9NXX6;T58-p ERPSLEDTEPSDSGD 0.910912795817508 0.0241631196729444 -0.019 0.314333333333333 0.79516251387724 22.0358289159474 -0.019 0.314333333333333 0.832690765944644 0.00625773414310761 -0.221677238611679 4.32554354078689 Q9NXX6 NSMCE4A Q9NXX6.T58.p_NSMCE4A Q9NXX6_T58tS61sS63s_3_3_58_63 Q9NXX6 Q9NXX6|Q9NXX6-2 Non-structural maintenance of chromosomes element 4 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20869.20869.4 11.06 11.06 0 5 3 3 0 1105.6913 4163.8165 T58t S61s S63s M68m TMT10 48 (R) EAPERPSLEDtEPsDsGDEMmDPASLEAEADQGLCR (Q) EAPERPS(0.0)LEDT(0.99)EPS(0.99)DS(0.99)GDEM(0.50)M(0.50)DPAS(0.0)LEAEADQGLCR C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S,m:Oxidized methionine NSMCE4A 44414.7 1 5 3661.1 45.81 HUMAN 1 -0.7952 22.0358 ERPSPEPSPFGSRTK-p Q8N612-2;S600-p ERPSPEPSPFGSRTK 0.784610264714199 0.0333249766421825 -0.0383333333333333 -0.299666666666667 2.02806183700211 19.9126508768864 -0.0383333333333333 -0.299666666666667 0.626893571391056 0.0102031650570784 -0.515007605285708 -3.85664062084186 Q8N612 FAM160A2 Q8N612.2.S600.p_FAM160A2 Q8N612-2_S600s _1_1_600_600 Q8N612-2 Q8N612-2|E9PJK5|Q8N612-3 Isoform 2 of FTS and Hook-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17466.17466.3 17.39 17.39 2.474 6 1 1 0 877.0702 2549.2258 S600s TMT10 585 (R) TWSAPYDGERPSPEPsPFGSR (T) T(0.0)WS(0.0)APY(0.0)DGERPS(0.0)PEPS(0.99)PFGS(0.0)R s:Phosphorylated S FAM160A2 108162.9 2 3 2416.1 84.39 HUMAN 1 -2.0281 -19.9127 ERPVKGHSPFTLRPK-p Q53LP3;S513-p ERPVKGHSPFTLRPK 0.11744061235666 0.265234443176566 -0.726 -0.125666666666667 19.3494242652777 7.59081351281698 -0.726 -0.125666666666667 0.0116160259475608 0.174148063173527 -3.74069993690138 -1.56361683946005 Q53LP3 SOWAHC Q53LP3.S513.p_SOWAHC Q53LP3_S513s _1_1_513_513 Q53LP3 Q53LP3 Ankyrin repeat domain-containing protein SOWAHC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10567.10567.4 9.26 9.26 9.263 2 1 1 0 420.2361 1597.9579 S513s TMT10 511 (K) GHsPFTLRPK (S) GHS(0.99)PFT(0.0)LRPK K:TMT10,s:Phosphorylated S SOWAHC 55956.3 4 4 2600.1 77.13 HUMAN 1 -19.3494 -7.5908 ERQFSTASDHEQPGV-p Q66K14;S1241-p ERQFSTASDHEQPGV 0.476784104106263 0.0373446409193848 0.107666666666667 0.265666666666667 5.92033369852395 19.184778233372 0.107666666666667 0.265666666666667 0.255838930058721 0.0120648569419112 1.27035867811797 3.70285195743168 Q66K14 TBC1D9B Q66K14.S1241.p_TBC1D9B Q66K14_S1241s _1_1_1241_1241 Q66K14 Q66K14|Q66K14-2|G3V133 TBC1 domain family member 9B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9631.9631.2 10.61 10.61 2.2 4 1 1 0 928.4069 1775.8398 S1241s TMT10 1236 (R) QFSTAsDHEQPGVSG (-) QFS(0.0)T(0.0)AS(0.99)DHEQPGVS(0.0)G s:Phosphorylated S TBC1D9B 141663.3 3 12 988.1 191.79 HUMAN 1 5.9203 19.1848 ERQSLGESPRTLSPT-p O14639;S426-p ERQSLGESPRTLSPT 0.25857825003948 0.108281503147132 0.175666666666667 0.284 11.1631828225961 12.7566332444647 0.175666666666667 0.284 0.0765035728156472 0.0530074210961633 2.18472256648469 2.46598181432486 O14639 ABLIM1 O14639.S426.p_ABLIM1 O14639_S426s _1_1_426_426 O14639 O14639|O14639-6|A0A0A0MRL6|O14639-2|F8W8M4|O14639-5 Actin-binding LIM protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5681.5681.2 10.25 5.15 4.989 2 1 1 0 591.7897 1102.6054 S426s TMT10 421 (R) QSLGEsPR (T) QS(0.0)LGES(0.99)PR s:Phosphorylated S ABLIM1 89568.8 1 3 435.1 313.2 HUMAN 1 11.1632 12.7566 ERQSTKRSPQQTVPY-p Q9UQR0;S499-p ERQSTKRSPQQTVPY 0.130972992482068 0.017031123123275 0.261 0.523 18.2593275529167 24.4028872716036 0.261 0.523 0.0149302556677922 0.00362836753852898 3.51493958461039 4.88820685565773 Q9UQR0 SCML2 Q9UQR0.S499.p_SCML2 Q9UQR0_S499s _1_1_499_499 Q9UQR0 Q9UQR0 Sex comb on midleg-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26270.26270.4 16.85 16.85 3.348 4 1 1 0 687.155 2665.626 S499s TMT10 499 (R) sPQQTVPYVVPLSPKLPK (T) S(0.99)PQQT(0.0)VPY(0.0)VVPLS(0.0)PKLPK K:TMT10,s:Phosphorylated S SCML2 78111.2 13 2 1086.1 179.58 HUMAN 1 18.2593 24.4029 ERRAKSPTPDGSERI-p J3QR07;T148-p ERRAKSPTPDGSERI 0.112769481962146 0.112146275073429 0.359 0.221333333333333 19.78544236359 12.539101459596 0.359 0.221333333333333 0.0105064443289466 0.0557301040680766 3.83305454680235 2.42706204011621 J3QR07 YTHDC1 J3QR07.T148.p_YTHDC1 J3QR07_S146sT148t_2_2_146_148 J3QR07 J3QR07|Q96MU7|Q96MU7-2 YTH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3354.3354.3 8.36 8.36 8.359 3 2 2 0 511.8905 1373.7222 S146s T148t Hydrogen 144 (R) AKsPtPDGSER (I) AKS(0.99)PT(0.99)PDGS(0.0)ER K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T YTHDC1 85871.1 17 19 702.1 239.92 HUMAN 1 19.7854 12.5391 ERRARRISACLSDYS-p Q9ULE0;S563-p ERRARRISACLSDYS 0.90552186362789 0.362500562469591 -0.0206666666666667 0.0996666666666667 0.846217281877872 5.84587563166489 -0.0206666666666667 0.0996666666666667 0.822959137777663 0.260263003193032 -0.234845981012517 1.25676671545808 Q9ULE0 WWC3 Q9ULE0.S563.p_WWC3 Q9ULE0_S563s _1_1_563_563 Q9ULE0 Q9ULE0 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28870.28870.5 22.89 22.89 2.747 7 1 1 0 611.712 2974.5596 S563s TMT10 561 (R) RIsACLSDYSLASDSGVFEPLTK (R) RIS(0.99)ACLS(0.0)DY(0.0)S(0.0)LAS(0.0)DS(0.0)GVFEPLT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WWC3 123814.7 15 16 161.1 495.35 HUMAN 1 -0.8462 5.8459 ERRDLMHSLAKLTDS-p Q9ULE0;S170-p ERRDLMHSLAKLTDS 0.853515833697351 0.0302841373435523 -0.0323333333333333 0.413 1.33332495801651 20.5425828987611 -0.0323333333333333 0.413 0.735643673138245 0.00882554858553292 -0.355519109766738 3.99250823304872 Q9ULE0 WWC3 Q9ULE0.S170.p_WWC3 Q9ULE0_S170s _1_1_170_170 Q9ULE0 Q9ULE0|Q9ULE0-2 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15612.15612.3 13.24 13.24 99 1 1 1 0 484.9282 1372.8023 S170s TMT10 166 (R) DLMHsLAK (L) DLMHS(1.0)LAK K:TMT10,s:Phosphorylated S WWC3 123814.7 5 3 161.1 495.35 HUMAN 1 -1.3333 20.5426 ERREGPGSEPDSQVD-p Q5JSZ5;S1395-p ERREGPGSEPDSQVD 0.934979371920407 0.0554860227632965 -0.0133333333333333 -0.278 0.573528261863343 16.7308920785769 -0.0133333333333334 -0.278 0.876288624212407 0.0212280837394062 -0.163192415441484 -3.20742216358193 Q5JSZ5 PRRC2B Q5JSZ5.S1395.p_PRRC2B Q5JSZ5_S1395s _1_1_1395_1395 Q5JSZ5 Q5JSZ5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16083.16083.3 24.37 24.37 2.488 4 1 1 0 1023.5181 2988.5729 S1395s TMT10 1391 (R) EGPGsEPDSQVDGGLSGASLGEKK (E) EGPGS(0.99)EPDS(0.0)QVDGGLS(0.0)GAS(0.0)LGEKK K:TMT10,s:Phosphorylated S PRRC2B 244103.4 9 74 36.2 882.05 HUMAN 1 -0.5735 -16.7309 ERRNRPESGGGGGCE-p Q5T2D3;S43-p ERRNRPESGGGGGCE 0.036022948076598 0.0103372263610749 -0.596 -0.459666666666667 33.544233886542 27.8757788657841 -0.594118654494571 -0.459666666666667 0.000442157108342103 0.00163088040013463 -7.58726840272887 -5.80262048079454 Q5T2D3 OTUD3 Q5T2D3.S43.p_OTUD3 Q5T2D3_S43s _1_1_43_43 Q5T2D3 Q5T2D3 OTU domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33821.33821.4 21.35 21.35 6.051 2 1 1 0 873.1794 3409.7211 S43s TMT10 39 (R) NRPEsGGGGGCEEEFVSFANQLQALGLK (L) NRPES(0.99)GGGGGCEEEFVS(0.0)FANQLQALGLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S OTUD3 45408.6 3 1 3435.1 51.19 HUMAN 1 -33.5442 -27.8758 ERRREERSVPTAYRV-p Q12872-2;S876-p ERRREERSVPTAYRV 0.659595024833796 0.53640071529275 0.0766666666666667 -0.09 3.3877006809118 3.63982223303135 0.0766666666666667 -0.09 0.458384508561469 0.43253153520797 0.798116220286122 -0.847488860923947 Q12872 SFSWAP Q12872.2.S876.p_SFSWAP Q12872-2_S876s _1_1_876_876 Q12872-2 Q12872-2 Isoform 2 of Splicing factor, suppressor of white-apricot homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8832.8832.2 8.71 1.97 8.707 3 1 1 0 551.7783 1022.5832 S876s TMT10 876 (R) sVPTAYR (V) S(0.99)VPT(0.0)AY(0.0)R s:Phosphorylated S SFSWAP 110466.6 1 7 485.1 296.41 HUMAN 1 3.3877 -3.6398 ERRRTIHTFPCLKEL-p Q86X02;T157-p ERRRTIHTFPCLKEL 0.0778192953261892 0.00463161465106776 -0.401333333333333 -0.547 23.6962077740673 34.1658689830095 -0.401333333333333 -0.547 0.0042695216742184 0.000383189060149099 -4.72096593183072 -7.79213296811229 Q86X02 CDR2L Q86X02.T157.p_CDR2L Q86X02_T157t _1_1_157_157 Q86X02 Q86X02 Cerebellar degeneration-related protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17973.17973.3 16 16 4.709 2 1 1 0 552.2979 1574.9129 T157t TMT10 154 (R) TIHtFPCLK (E) T(0.0)IHT(0.99)FPCLK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CDR2L 53408.9 2 2 1833.1 112.07 HUMAN 1 -23.6962 -34.1659 ERRSAAGSEKEEEPE-p O00267;S36-p ERRSAAGSEKEEEPE 0.578480550896764 0.0665367758272859 -0.100333333333333 0.237666666666667 4.37172166122379 15.6551823393921 -0.100333333333333 0.237666666666667 0.365449888636596 0.0271945430687825 -0.987550454007595 3.00019463582778 O00267 SUPT5H O00267.S36.p_SUPT5H O00267_S36s _1_1_36_36 O00267 O00267|O00267-2 Transcription elongation factor SPT5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11180.11180.5 27.89 27.89 1.285 3 1 1 0 1113.4807 5483.4145 S36s Hydrogen 32 (R) SAAGsEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPR (H) S(0.0)AAGS(0.99)EKEEEPEDEEEEEEEEEY(0.0)DEEEEEEDDDRPPKKPR K:TMT10-Lys-Only,s:Phosphorylated S SUPT5H 121396.8 2 1 1946.1 105.81 HUMAN 1 -4.3717 15.6552 ERRTRRESRQESDPE-p Q9H307;S96-p ERRTRRESRQESDPE 0.00956415249523423 0.00232985334139993 -1.11 -0.871666666666667 47.5734397946544 40.5150134834706 -1.11 -0.871666666666667 1.74846128529346e-05 8.88175218811727e-05 -14.165932951817 -10.3654542876542 Q9H307 PNN Q9H307.S96.p_PNN Q9H307_S96sS100s_2_2_96_100 Q9H307 Q9H307 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13480.13480.4 10.88 10.88 10.884 6 2 2 0 1045.2839 4018.1863 S96s S100s TMT10 94 (R) REsRQEsDPEDDDVKKPALQSSVVATSK (E) RES(0.99)RQES(0.99)DPEDDDVKKPALQS(0.0)S(0.0)VVAT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S PNN 81726.4 5 13 180.1 480.36 HUMAN 1 -47.5734 -40.515 ERSANGGSESDGEEN-p O43290;S596-p ERSANGGSESDGEEN 0.834327857608735 0.0622477770177632 0.0326666666666667 0.283666666666667 1.51751850667497 16.0501973360905 0.0326666666666667 0.283666666666667 0.705095835040122 0.0248302027847709 0.399088153587201 3.07565293662728 O43290 SART1 O43290.S596.p_SART1 O43290_S596sS598s_2_2_596_598 O43290 O43290 U4/U6.U5 tri-snRNP-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26105.26105.3 12.68 12.68 1.605 5 2 2 0 1081.8035 3082.4489 N593n S596s S598s TMT10 591 (R) SAnGGsEsDGEENIGWSTVNLDEEK (Q) S(0.0)AN(0.99)GGS(0.99)ES(0.99)DGEEN(0.0)IGWS(0.0)T(0.0)VN(0.0)LDEEK K:TMT10,n:Deamidated,s:Phosphorylated S SART1 90424.4 4 8 2155.1 95.34 HUMAN 1 1.5175 16.0502 ERSDYDRSRERDERR-p Q9BXP5;S26-p ERSDYDRSRERDERR 0.522539990450793 0.731211224390976 0.132666666666667 -0.0396666666666666 5.21187574756822 1.87417035804597 0.132666666666667 -0.0396666666666667 0.301170496726661 0.649505696175496 1.14274750948786 -0.480697715883835 Q9BXP5 SRRT Q9BXP5.S26.p_SRRT Q9BXP5_S26s _1_1_26_26 Q9BXP5 Q9BXP5|Q9BXP5-3|Q9BXP5-2|Q9BXP5-4|Q9BXP5-5|A0A087X0F4 Serrate RNA effector molecule homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3757.3757.3 9.35 1.64 4.342 3 1 1 0 403.1819 1127.5643 S26s TMT10 21 (R) SDYDRsR (E) S(0.0)DY(0.0)DRS(0.99)R s:Phosphorylated S SRRT 101121.1 3 2 321.1 364.45 HUMAN 1 5.2119 -1.8742 ERSGAGSSPETKEQN-p Q9UQ35;S1219-p ERSGAGSSPETKEQN 0.110179037692256 0.0373659250742016 0.591333333333333 -0.333 20.0403617353085 19.1812732691019 0.591333333333333 -0.333 0.00990749419328255 0.0120745977888785 3.88761778812428 -3.70211945467614 Q9UQ35 SRRM2 Q9UQ35.S1219.p_SRRM2 Q9UQ35_S1219s _1_1_1219_1219 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5229.5229.2 11.28 11.28 1.325 4 1 1 0 729.8664 1378.7578 S1219s TMT10 1214 (R) SGAGSsPETK (E) S(0.0)GAGS(0.0)S(0.99)PET(0.0)K K:TMT10,s:Phosphorylated S SRRM2 300351.7 13 70 2.1 3310.34 HUMAN 1 20.0404 -19.1813 ERSGLQLSLEQGTGE-p P23497-4;S171-p ERSGLQLSLEQGTGE 0.486350322519858 0.264228100745281 0.124666666666667 -0.122333333333333 5.76732470467884 7.61471904441828 0.124666666666667 -0.122333333333333 0.265013214249952 0.173192106927989 1.24300131627086 -1.56777215028342 P23497 SP100 P23497.4.S171.p_SP100 P23497-4_S171s _1_1_171_171 P23497-4 P23497-4|P23497-3 Isoform Sp100-C of Nuclear autoantigen Sp-100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20349.20349.3 14.32 14.32 4.78 4 1 1 0 711.3462 2052.0559 S171s TMT10 166 (R) SGLQLsLEQGTGENSFR (S) S(0.0)GLQLS(0.99)LEQGT(0.0)GENS(0.0)FR s:Phosphorylated S SP100 103285 2 3 542.1 276.37 HUMAN 1 5.7673 -7.6147 ERSGPLASPVLLETG-p Q9UPS6;S1464-p ERSGPLASPVLLETG 0.560899556742354 0.242337555542735 0.161666666666667 0.261666666666667 4.62499916231117 8.10942831254393 0.161666666666667 0.261666666666667 0.344746673069599 0.154545786388816 1.03486600387264 1.65360662573585 Q9UPS6 SETD1B Q9UPS6.S1464.p_SETD1B Q9UPS6_S1464s _1_1_1464_1464 Q9UPS6 Q9UPS6 Histone-lysine N-methyltransferase SETD1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.38401.38401.4 18.39 18.39 2.332 3 1 1 0 911.8038 3564.211 S1464s TMT10 1459 (R) SGPLAsPVLLETGLPLPLPLPLPLPLALPAVLR (A) S(0.0)GPLAS(0.99)PVLLET(0.0)GLPLPLPLPLPLPLALPAVLR s:Phosphorylated S SETD1B 213997.2 1 23 570.1 269.37 HUMAN 1 4.625 8.1094 ERSGREVSGHSVRGA-p Q9NWH9;S909-p ERSGREVSGHSVRGA 0.38456262253289 0.186186189492269 0.199333333333333 0.189 7.68432459828066 9.60150946416559 0.199333333333333 0.189 0.17043843594365 0.109609716276155 1.58034666753175 1.91181561543225 Q9NWH9 SLTM Q9NWH9.S909.p_SLTM Q9NWH9_S909s _1_1_909_909 Q9NWH9 Q9NWH9|Q9NWH9-3 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4251.4251.3 10.2 10.2 2.289 2 1 1 0 393.8623 1099.6057 S909s TMT10 907 (R) EVsGHSVR (G) EVS(0.99)GHS(0.0)VR s:Phosphorylated S SLTM 117431.6 2 16 167.1 494.15 HUMAN 1 7.6843 9.6015 ERSHHQKSLANSGGW-p Q9Y6R9;S469-p ERSHHQKSLANSGGW 0.297184072075513 0.0263581786161247 -0.328 -0.695666666666667 9.92855914364635 21.4475733642342 -0.328 -0.695666666666667 0.101658590906239 0.00716543669687027 -1.96930136244105 -4.19244317248776 Q9Y6R9 CCDC61 Q9Y6R9.S469.p_CCDC61 Q9Y6R9_S469sS473s_2_2_469_473 Q9Y6R9 Q9Y6R9|Q9Y6R9-2 Coiled-coil domain-containing protein 61 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26988.26988.3 10.1 5.63 99 2 2 2 0 616.314 1686.9943 S469s S473s TMT10 469 (K) sLANsGGWVPIK (E) S(1.0)LANS(1.0)GGWVPIK K:TMT10,s:Phosphorylated S CCDC61 57595.5 1 6 2443.1 83.27 HUMAN 1 -9.9286 -21.4476 ERSKQVSSVNEEDFV-p P40189;S839-p ERSKQVSSVNEEDFV 0.491405696420774 0.036668096049474 -0.155 -0.439 5.68085423539015 19.3153874296999 -0.155 -0.439 0.270342656140939 0.0117074215694188 -1.22749479089621 -3.73020215567973 P40189 IL6ST P40189.S839.p_IL6ST P40189_S839s _1_1_839_839 P40189 P40189|P40189-3 Interleukin-6 receptor subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12910.12910.3 13.65 13.65 1.101 3 1 1 0 721.3674 2082.1232 S839s TMT10 834 (R) SKQVSsVNEEDFVR (L) S(0.0)KQVS(0.0)S(0.99)VNEEDFVR K:TMT10,s:Phosphorylated S IL6ST 104561.7 4 3 2726.1 72.62 HUMAN 1 -5.6809 -19.3154 ERSLNAASAMGPAPL-p Q01826-2;S456-p ERSLNAASAMGPAPL 0.631521203791749 0.03332106946416 -0.0706666666666667 -0.393 3.71651507552327 19.9137504489132 -0.0706666666666667 -0.393 0.424960429658307 0.0102005820874094 -0.862537900241322 -3.85687550388945 Q01826 SATB1 Q01826.2.S456.p_SATB1 Q01826-2_S456s _1_1_456_456 Q01826-2 Q01826-2 Isoform 2 of DNA-binding protein SATB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20064.20064.3 14.46 12.73 1.522 5 1 1 0 932.8286 2716.5017 S456s Hydrogen 451 (R) SLNAAsAMGPAPLISTPPSRPPQVK (T) S(0.0)LNAAS(0.99)AMGPAPLIS(0.0)T(0.0)PPS(0.0)RPPQVK K:TMT10-Lys-Only,s:Phosphorylated S SATB1 89467.4 3 7 821.1 218.79 HUMAN 1 -3.7165 -19.9138 ERSNRAASAAGAAGS-p Q9UKY7;S30-p ERSNRAASAAGAAGS 0.145152146047681 0.478443562612247 0.243666666666667 0.071 17.1002841775711 4.27047546455532 0.243666666666667 0.071 0.0194971701720816 0.374069632976665 3.28241279737454 0.968318616359149 Q9UKY7 CDV3 Q9UKY7.S30.p_CDV3 Q9UKY7_S30s _1_1_30_30 Q9UKY7 Q9UKY7|Q9UKY7-2 Protein CDV3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8855.8855.5 24.21 24.21 10.814 8 1 1 0 842.4074 4128.0455 S30s TMT10 28 (R) AAsAAGAAGSAGGSSGAAGAAGGGAGAGTRPGDGGTASAGAAGPGAATK (A) AAS(0.99)AAGAAGS(0.0)AGGS(0.0)S(0.0)GAAGAAGGGAGAGT(0.0)RPGDGGT(0.0)AS(0.0)AGAAGPGAAT(0.0)K K:TMT10,s:Phosphorylated S CDV3 27334.4 2 2 802.1 222.73 HUMAN 1 17.1003 4.2705 ERSPALKSPLQSVVV-p Q9Y2W1;S253-p ERSPALKSPLQSVVV 0.674071856956608 0.065212128506994 0.0616666666666667 -0.226666666666667 3.21092928808383 15.7775919648167 0.0616666666666667 -0.226666666666667 0.477427104551654 0.0264387430153205 0.762938264270356 -3.02350145235501 Q9Y2W1 THRAP3 Q9Y2W1.S253.p_THRAP3 Q9Y2W1_S253s _1_1_253_253 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17003.17003.2 15.2 15.2 1.482 3 1 1 0 895.5114 1710.0475 S253s Hydrogen 248 (R) SPALKsPLQSVVVR (R) S(0.0)PALKS(0.99)PLQS(0.0)VVVR K:TMT10-Lys-Only,s:Phosphorylated S THRAP3 108720.9 10 61 10.2 1293.04 HUMAN 1 3.2109 -15.7776 ERSPVDESGDEVQYG-p Q8WX93;S984-p ERSPVDESGDEVQYG 0.726174334084308 0.0910189116859863 0.0513333333333333 0.190333333333333 2.63585813313462 13.7690754196743 0.0513333333333333 0.190333333333333 0.54502219277478 0.0419848357038359 0.64542822305802 2.64905997410246 Q8WX93 PALLD Q8WX93.S984.p_PALLD Q8WX93_S984s _1_1_984_984 Q8WX93 Q8WX93|Q8WX93-5|Q8WX93-9|Q8WX93-2|Q8WX93-3|Q8WX93-8|Q8WX93-4 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33869.33869.4 22.15 22.15 4.985 3 1 1 0 903.6653 3531.67 S984s TMT10 979 (R) SPVDEsGDEVQYGDVPVENGMAPFFEMK (L) S(0.0)PVDES(0.99)GDEVQY(0.0)GDVPVENGMAPFFEMK K:TMT10,s:Phosphorylated S PALLD 151930.4 21 10 338.1 354.43 HUMAN 1 2.6359 13.7691 ERSQMLLSRRNQLLL-p Q9BPW8;S161-p ERSQMLLSRRNQLLL 0.933823326424321 0.0218392489834702 0.0163333333333333 0.323 0.58516431576196 22.7005751117269 0.0163333333333333 0.323 0.873943926207115 0.00536960684982072 0.166318983227134 4.47906603282819 Q9BPW8 NIPSNAP1 Q9BPW8.S161.p_NIPSNAP1 Q9BPW8_S161s _1_1_161_161 Q9BPW8 Q9BPW8 Protein NipSnap homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8679.8679.3 7.08 7.08 7.084 2 1 1 0 433.8981 1219.7142 S161s TMT10 156 (R) SQMLLsRR (N) S(0.0)QMLLS(0.99)RR s:Phosphorylated S NIPSNAP1 33480.5 1 3 4037.1 38.77 HUMAN 1 0.5852 22.7006 ERSRINSSGESGDES-p O60841;S183-p ERSRINSSGESGDES 0.887539377298516 0.0136048287828112 -0.0288333333333333 0.4995 1.00871392089557 25.9354066991201 -0.0288333333333333 0.4995 0.792736049172464 0.00254952532394186 -0.276062796698152 5.27774409869389 O60841 EIF5B O60841.S183.p_EIF5B O60841_S182sS183s_2_2_182_183 O60841 O60841|A0A087WUT6 Eukaryotic translation initiation factor 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.13300.13496.2 12.8 12.8 1.69 5 2 2 0 1058.8893 1956.8417 S182s S183s Hydrogen 180 (R) INssGESGDESDEFLQSR (K) INS(0.99)S(0.99)GES(0.0)GDES(0.0)DEFLQS(0.0)R s:Phosphorylated S EIF5B 139280.8 4 17 113.1 571.22 HUMAN 2 -1.0087 25.9354 ERSSITMTPPASPKS-p Q12955;T1642-p ERSSITMTPPASPKS 0.551111045185103 0.116911685252045 0.0816666666666667 -0.254666666666667 4.77524367803986 12.2930349694033 0.0816666666666667 -0.254666666666667 0.333024076155878 0.0589788775490155 1.06270463629743 -2.3831978195854 Q12955 ANK3 Q12955.T1642.p_ANK3 Q12955_T1642t _1_1_1642_1642 Q12955 Q12955 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16048.16048.3 11.42 11.42 2.68 5 1 1 0 585.6447 1674.9501 T1642t TMT10 1637 (R) SSITMtPPASPK (S) S(0.0)S(0.0)IT(0.0)MT(0.99)PPAS(0.0)PK K:TMT10,t:Phosphorylated T ANK3 482683.6 1 14 135.1 530.51 HUMAN 1 4.7752 -12.293 ERSSSASSPEMKDGL-p Q9UQ35;S1424-p ERSSSASSPEMKDGL 0.860853695226638 0.315332667920206 -0.0273333333333333 0.107333333333333 1.27212998298585 6.62198887519838 -0.0273333333333333 0.107333333333333 0.746082754834405 0.2176712706643 -0.340812138534114 1.39430362033549 Q9UQ35 SRRM2 Q9UQ35.S1424.p_SRRM2 Q9UQ35_S1424s_1_1_1424_1424 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4949.4949.2 8.64 8.64 1.22 5 1 1 0 782.8692 1468.7718 S1424s M1427m TMT10 1419 (R) SSSASsPEmK (D) S(0.0)S(0.0)S(0.0)AS(0.0)S(0.99)PEM(1.0)K K:TMT10,s:Phosphorylated S,m:Oxidized methionine SRRM2 300351.7 8 85 2.1 3310.34 HUMAN 1 -1.2721 6.622 ERSSSCGSGGGGISP-p Q96EP1;S208-p ERSSSCGSGGGGISP 0.427326903036929 0.0902486627118673 -0.153333333333333 -0.342333333333333 6.80250619072849 13.8209311843766 -0.153333333333333 -0.342333333333333 0.208809080491122 0.0414865080578415 -1.42639672775191 -2.65852953532811 Q96EP1 CHFR Q96EP1.S208.p_CHFR Q96EP1_S208s _1_1_208_208 Q96EP1 Q96EP1|Q96EP1-4|Q96EP1-2 E3 ubiquitin-protein ligase CHFR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7741.7741.2 13.77 9.45 3.199 5 1 1 0 888.4254 1695.8736 S208s TMT10 203 (R) SSSCGsGGGGISPK (G) S(0.0)S(0.0)S(0.0)CGS(0.99)GGGGIS(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CHFR 75439.2 3 3 3382.1 52.35 HUMAN 1 -6.8025 -13.8209 ERSTFTDSQLGNADM-p Q99959;S342-p ERSTFTDSQLGNADM 0.476079193431219 0.921634152869848 0.105666666666667 0.0116666666666667 5.93421779135548 0.4979154049362 0.105666666666667 0.0116666666666667 0.255022336766929 0.891678837484632 1.27283615662574 0.142701765720499 Q99959 PKP2 Q99959.S342.p_PKP2 Q99959_S342s _1_1_342_342 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23885.23885.3 12.73 12.73 2.89 5 1 1 0 819.029 2375.1056 S342s TMT10 337 (R) STFTDsQLGNADMEMTLER (A) S(0.0)T(0.0)FT(0.0)DS(0.99)QLGNADMEMT(0.0)LER s:Phosphorylated S PKP2 97926.6 1 18 257.1 399.17 HUMAN 1 5.9342 0.4979 ERTANEKTTPFPAEP-p A0A1B0GV46;T800-p ERTANEKTTPFPAEP 0.992821359885708 0.012159953222783 0.00999999999999994 0.594 0.064122107717434 26.7370856639142 0.00999999999999986 0.594 0.985343802206808 0.00211978313999982 0.0192339114025736 5.49013204941017 A0A1B0GV46 NotFound A0A1B0GV46.T800.p_NotFound A0A1B0GV46_T800tT801tT808t_3_3_800_808 A0A1B0GV46 A0A1B0GV46 Diffuse panbronchiolitis critical region protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11860.11860.5 8.46 5.44 1.247 9 3 3 0 939.9993 4453.2069 N778n N780n N797n T800t T801t T808t Hydrogen 774 (R) TPLAnEnTTLSPAEPTENRERTAnEKttPFPAEPtENR (E) T(0.0)PLAN(0.99)EN(0.99)T(0.0)T(0.0)LS(0.0)PAEPT(0.0)EN(0.0)RERT(0.0)AN(0.99)EKT(0.99)T(0.99)PFPAEPT(0.99)EN(0.0)R K:TMT10-Lys-Only,n:Deamidated,t:Phosphorylated T DPCR1 158728 1 4 5532.1 18.44 HUMAN 1 0.0641 26.7371 ERTEAPGTPEGPEPE-p A0A0G2JNW7;T30-p ERTEAPGTPEGPEPE 0.287132448838618 0.140172445569666 0.169333333333333 0.171333333333333 10.2202537871073 11.2449450002725 0.169333333333333 0.171333333333333 0.0950549245128273 0.0750767561896707 2.02000338512318 2.19806191498683 A0A0G2JNW7 NotFound A0A0G2JNW7.T30.p_NotFound A0A0G2JNW7_T30t _1_1_30_30 A0A0G2JNW7 Q9Y666|A0A0G2JNW7|Q9Y666-2 Solute carrier family 12 member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7768.7768.3 18.25 18.25 4.2 3 1 1 0 885.0737 2573.2429 T30t TMT10 25 (R) TEAPGtPEGPEPERPSPGDGNPR (E) T(0.0)EAPGT(0.99)PEGPEPERPS(0.0)PGDGNPR t:Phosphorylated T SLC12A7 120389 4 1 1247.2 162.14 HUMAN 1 10.2203 11.2449 ERTLEPDSSDEEPPP-p Q9NWM3;S122-p ERTLEPDSSDEEPPP 0.158894462563312 0.286646167838699 0.23 0.117 16.001261925181 7.15809042566539 0.23 0.117 0.0251115666118284 0.192393749007555 3.06843259065629 1.48823820409656 Q9NWM3 CUEDC1 Q9NWM3.S122.p_CUEDC1 Q9NWM3_S122sS123s_2_2_122_123 Q9NWM3 Q9NWM3|Q9NWM3-2 CUE domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25968.26228.5 28.85 29.45 3.958 8 2 2 0 957.845 4625.2649 S122s S123s TMT10 117 (R) TLEPDssDEEPPPVYSPPAYHMHVFDRPYPLAPPTPPPR (I) T(0.0)LEPDS(0.99)S(0.99)DEEPPPVY(0.0)S(0.0)PPAY(0.0)HMHVFDRPY(0.0)PLAPPT(0.0)PPPR s:Phosphorylated S CUEDC1 42428.4 2 3 2526.1 79.86 HUMAN 1 16.0013 7.1581 ERTTKSPSDSGYSYE-p P46821;S1917-p ERTTKSPSDSGYSYE 0.674865072551573 0.161322100000637 -0.0643333333333333 -0.169666666666667 3.19925002233917 10.4187244755195 -0.0643333333333333 -0.169666666666667 0.478712753486462 0.0908087196557752 -0.760599657701291 -2.05369047954422 P46821 MAP1B P46821.S1917.p_MAP1B P46821_S1917s _1_1_1917_1917 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14242.14242.3 13.92 13.92 1.221 9 1 1 0 863.4435 2508.3437 S1917s TMT10 1912 (R) TTKSPsDSGYSYETIGK (T) T(0.0)T(0.0)KS(0.0)PS(0.99)DS(0.0)GY(0.0)S(0.0)Y(0.0)ET(0.0)IGK K:TMT10,s:Phosphorylated S MAP1B 271827.6 4 20 210.1 442.48 HUMAN 1 -3.1993 -10.4187 ERTTPDGSIGEMEHP-p Q08174-2;S1097-p ERTTPDGSIGEMEHP 0.889031335649899 0.0314271135473857 0.0213333333333333 0.297333333333333 0.996768512002002 20.3001521941186 0.0213333333333333 0.297333333333334 0.794919496523179 0.00933221596414844 0.273067646158673 3.93990684595874 Q08174 PCDH1 Q08174.2.S1097.p_PCDH1 Q08174-2_S1097s _1_1_1097_1097 Q08174-2 Q08174-2 Isoform 2 of Protocadherin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20862.20862.4 25.54 22.43 1.893 6 1 1 0 927.425 3626.7086 S1097s TMT10 1092 (R) TTPDGsIGEMEHPENDLRPLPDVAMTGTCTR (E) T(0.0)T(0.0)PDGS(0.99)IGEMEHPENDLRPLPDVAMT(0.0)GT(0.0)CT(0.0)R C:Carbamidomethylation,s:Phosphorylated S PCDH1 134290.1 2 8 666.1 249.91 HUMAN 1 0.9968 20.3002 ERVKRLVTPEKVNSR-p Q9H2K2;T45-p ERVKRLVTPEKVNSR 0.0982861688091806 0.00259686134026793 -0.358333333333333 -0.679 21.3377809643349 39.4651030948999 -0.358333333333333 -0.679 0.00734889265269491 0.000113107053912194 -4.17211719103881 -9.89335297806293 Q9H2K2 TNKS2 Q9H2K2.T45.p_TNKS2 Q9H2K2_T45t _1_1_45_45 Q9H2K2 Q9H2K2 Tankyrase-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9763.9763.3 7.64 1.95 99 1 1 1 0 460.9385 1300.8353 T45t TMT10 42 (K) RLVtPEK (V) RLVT(1.0)PEK K:TMT10,t:Phosphorylated T TNKS2 128570.2 1 1 4270.1 34.43 HUMAN 1 -21.3378 -39.4651 ERVLSSTSEEDEPGV-p Q8NI08-2;S211-p ERVLSSTSEEDEPGV 0.750791977446551 0.121889607656088 0.0556666666666666 -0.195 2.37160562175382 12.0553528692915 0.0556666666666667 -0.195 0.579214516555387 0.0622966528621422 0.589610044297014 -2.34098208829972 Q8NI08 NCOA7 Q8NI08.2.S211.p_NCOA7 Q8NI08-2_S211s _1_1_211_211 Q8NI08-2 Q8NI08|Q8NI08-2|Q8NI08-7|Q8NI08-3|Q8NI08-4 Isoform 2 of Nuclear receptor coactivator 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17756.17756.2 10.08 7.37 1.101 4 1 1 0 1057.5383 2034.1007 S211s TMT10 206 (R) VLSSTsEEDEPGVVK (F) VLS(0.0)S(0.0)T(0.0)S(0.99)EEDEPGVVK K:TMT10,s:Phosphorylated S NCOA7 105415.6 2 3 906.1 202.52 HUMAN 1 2.3716 -12.0554 ERVPLDLSPRLEETL-p Q9UKV5;S542-p ERVPLDLSPRLEETL 0.662772339610475 0.174982512257968 -0.0686666666666667 -0.28 3.34426579667991 9.95501896030447 -0.0686666666666667 -0.28 0.462991928985547 0.10104110892947 -0.789509706955041 -1.97310288889011 Q9UKV5 AMFR Q9UKV5.S542.p_AMFR Q9UKV5_S542s _1_1_542_542 Q9UKV5 Q9UKV5 E3 ubiquitin-protein ligase AMFR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16944.16944.4 16.66 10.13 16.392 9 1 1 0 1115.545 4379.1912 S542s TMT10 507 (R) SDSIRPALNSPVERPSSDQEEGETSAQTERVPLDLsPR (L) S(0.0)DS(0.0)IRPALNS(0.0)PVERPS(0.0)S(0.0)DQEEGET(0.0)S(0.0)AQT(0.0)ERVPLDLS(0.99)PR s:Phosphorylated S AMFR 73793.2 2 5 1976.1 104.62 HUMAN 1 -3.3443 -9.955 ERVRNCSSPEFSKTL-p B0QZ18;S60-p ERVRNCSSPEFSKTL 0.683488788294502 0.124371838218207 -0.0633333333333333 0.180333333333333 3.09899289793411 11.9417089442101 -0.0633333333333334 0.180333333333333 0.489892409219906 0.0639483150021203 -0.740448140646715 2.32084824902719 B0QZ18 CPNE1 B0QZ18.S60.p_CPNE1 B0QZ18_S60s _1_1_60_60 B0QZ18 B0QZ18|Q99829|A6PVH9|E7ENH5|E7EV27 Copine-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10156.10156.2 10.78 7.46 1.349 3 1 1 0 797.3713 1513.7721 S60s TMT10 57 (R) NCSsPEFSK (T) NCS(0.0)S(0.99)PEFS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CPNE1 60344.2 4 1 5539.1 18.35 HUMAN 1 -3.099 11.9417 ERVSGRTSPPLLDRA-p Q9UQ35;S2398-p ERVSGRTSPPLLDRA 0.361131241199818 0.296102279910385 0.169666666666667 0.104666666666667 8.22346400441105 6.9779459569323 0.169666666666667 0.104666666666667 0.150540585066228 0.200542028847637 1.67390499422331 1.45675101903358 Q9UQ35 SRRM2 Q9UQ35.S2398.p_SRRM2 Q9UQ35_S2398s _1_1_2398_2398 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11934.11934.3 8.72 5.73 1.43 3 1 1 0 536.2888 1526.8852 S2398s TMT10 2393 (R) VSGRTsPPLLDR (A) VS(0.0)GRT(0.0)S(0.99)PPLLDR s:Phosphorylated S SRRM2 300351.7 18 155 2.1 3310.34 HUMAN 1 8.2235 6.9779 ERVTEHGTPKPFRKF-p Q9NZN5;T736-p ERVTEHGTPKPFRKF 0.54008300330351 0.974897360745748 0.131333333333333 0.004 4.93966304637527 0.156014800333478 0.131333333333333 0.004 0.320651809717647 0.96471386423956 1.09298934397487 0.0463194027402085 Q9NZN5 ARHGEF12 Q9NZN5.T736.p_ARHGEF12 Q9NZN5_T736t _1_1_736_736 Q9NZN5 Q9NZN5|Q9NZN5-2|E9PMR6 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8343.8343.4 14.67 14.67 3.798 2 1 1 0 452.4972 1727.0005 T736t TMT10 731 (R) VTEHGtPKPFR (K) VT(0.0)EHGT(0.99)PKPFR K:TMT10,t:Phosphorylated T ARHGEF12 174199.1 9 7 251.1 406.16 HUMAN 1 4.9397 0.156 ERVTVMASLRRPKRI-p P78527;S3731-p ERVTVMASLRRPKRI 0.424064582948113 0.0386745972221711 -0.126 0.252333333333333 6.86842703363442 18.9688683416483 -0.126 0.252333333333333 0.205663535158109 0.0126798222597064 -1.43796183319776 3.65786955327216 P78527 PRKDC P78527.S3731.p_PRKDC P78527_S3731s _1_1_3731_3731 P78527 P78527|P78527-2 DNA-dependent protein kinase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12671.12671.4 9.42 9.58 9.419 2 1 1 0 449.7647 1716.0719 S3731s TMT10 3726 (R) VTVMAsLRRPK (R) VT(0.0)VMAS(0.99)LRRPK K:TMT10,s:Phosphorylated S PRKDC 474044.1 1 18 362.1 342.68 HUMAN 1 -6.8684 18.9689 ERYFRAQSREQLAAL-p Q9UII2;S63-p ERYFRAQSREQLAAL 0.584211231259265 0.0548752135161895 -0.075 -0.328666666666667 4.29670532124084 16.8027075458035 -0.075 -0.328666666666667 0.371817192997273 0.0208799399549927 -0.973436986559654 -3.22145752283272 Q9UII2 ATPIF1 Q9UII2.S63.p_ATPIF1 Q9UII2_S63s _1_1_63_63 Q9UII2 Q9UII2 ATPase inhibitor, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11293.11293.4 9.04 9.04 99 1 1 1 0 528.3145 2030.2689 S63s TMT10 61 (R) AQsREQLAALKK (H) AQS(1.0)REQLAALKK K:TMT10,s:Phosphorylated S ATPIF1 12248.6 3 2 4281.1 34.31 HUMAN 1 -4.2967 -16.8027 ERYHHMDSEDEEEVS-p Q6P0Q8;S825-p ERYHHMDSEDEEEVS 0.742163837330897 0.383465155943424 -0.0546666666666667 0.1 2.46021728366353 5.53227873973006 -0.0546666666666667 0.1 0.567516211060615 0.27975130815632 -0.608469620885872 1.2005036350255 Q6P0Q8 MAST2 Q6P0Q8.S825.p_MAST2 Q6P0Q8_S825s _1_1_825_825 Q6P0Q8 Q6P0Q8|Q6P0Q8-2|E7ERL6 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13126.13126.4 15.65 15.65 7.973 3 1 1 0 722.7945 2808.1926 S825s TMT10 820 (R) YHHMDsEDEEEVSEDGCLEIR (Q) Y(0.0)HHMDS(0.99)EDEEEVS(0.0)EDGCLEIR C:Carbamidomethylation,s:Phosphorylated S MAST2 197687.5 1 46 121.1 549.41 HUMAN 1 -2.4602 5.5323 ERYLSVKSLPEAMRM-p Q7Z591;S770-p ERYLSVKSLPEAMRM 0.396926015285751 0.0207851374528881 0.133666666666667 0.32 7.40638993851358 23.007545122719 0.133666666666667 0.32 0.181702543281378 0.00500317262588974 1.53197868636265 4.55111194031486 Q7Z591 AKNA Q7Z591.S770.p_AKNA Q7Z591_S770s _1_1_770_770 Q7Z591 Q7Z591|Q7Z591-2 AT-hook-containing transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12745.12745.2 10.38 3.53 99 1 1 1 0 556.7724 1032.5709 S770s TMT10 770 (K) sLPEAMR (M) S(1.0)LPEAMR s:Phosphorylated S AKNA 155935.2 1 6 737.1 234.85 HUMAN 1 7.4064 23.0075 ESAAADFSDEDEDDD-p O43815;S245-p ESAAADFSDEDEDDD 0.591050297355019 0.826109442814814 0.0713333333333333 0.0236666666666667 4.20665575155852 1.16036401915566 0.0713333333333333 0.0236666666666667 0.379607185803668 0.765532438435119 0.956431607648914 0.313602450743352 O43815 STRN O43815.S245.p_STRN O43815_S245s _1_1_245_245 O43815 O43815|O43815-2 Striatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21704.21704.3 22.35 19.59 4.677 2 1 1 0 1038.4543 3033.3849 S245s TMT10 236 (K) FLESAAADFsDEDEDDDVDGREK (S) FLES(0.0)AAADFS(0.99)DEDEDDDVDGREK K:TMT10,s:Phosphorylated S STRN 86587 4 3 1137.2 173.35 HUMAN 1 4.2067 1.1604 ESALRKQSLYLKFDP-p Q9Y6A5;S558-p ESALRKQSLYLKFDP 0.0511487796737011 0.00517709629283449 -0.447 -0.702333333333333 28.3013524762255 33.252666197546 -0.447 -0.702333333333333 0.00147864783719301 0.000472860873606353 -5.93149880585807 -7.47256697523508 Q9Y6A5 TACC3 Q9Y6A5.S558.p_TACC3 Q9Y6A5_S558s _1_1_558_558 Q9Y6A5 Q9Y6A5 Transforming acidic coiled-coil-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14226.14226.3 9.38 9.38 9.376 2 1 1 0 549.6669 1567.0186 S558s TMT10 556 (R) KQsLYLK (F) KQS(0.99)LY(0.0)LK K:TMT10,s:Phosphorylated S TACC3 91213.8 1 9 1278.1 159 HUMAN 1 -28.3014 -33.2527 ESARGSDSEDEVLRM-p Q8WVC0;S279-p ESARGSDSEDEVLRM 0.49068989261579 0.0148943094905297 -0.158 0.974 5.69803864513775 25.2910590700184 -0.158 0.974 0.269275062575609 0.00295729121392139 -1.23057916402964 5.11139612571797 Q8WVC0 LEO1 Q8WVC0.S279.p_LEO1 Q8WVC0_S279s _1_1_279_279 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9152.9152.2 12.01 12.01 1.223 2 1 1 0 708.3169 1335.659 S279s TMT10 276 (R) GSDsEDEVLR (M) GS(0.0)DS(0.99)EDEVLR s:Phosphorylated S LEO1 75516.9 1 7 514.1 286.88 HUMAN 1 -5.698 25.2911 ESCRIASSVNWSDVD-p Q9UPW0;S472-p ESCRIASSVNWSDVD 0.741409981555911 0.21428638768726 0.0503333333333333 0.125666666666667 2.46639903552895 8.80390023095974 0.0503333333333333 0.125666666666667 0.566708982576842 0.13170733945454 0.609779824279153 1.77379479180158 Q9UPW0 FOXJ3 Q9UPW0.S472.p_FOXJ3 Q9UPW0_S472s _1_1_472_472 Q9UPW0 Q9UPW0|Q9UPW0-2 Forkhead box protein J3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36667.36667.3 26.47 26.47 1.221 5 1 1 0 970.4548 2829.3749 S472s TMT10 469 (R) IASsVNWSDVDLSQFQGLMESMR (Q) IAS(0.0)S(0.99)VNWS(0.0)DVDLS(0.0)QFQGLMES(0.0)MR s:Phosphorylated S FOXJ3 69472.6 7 5 1390.1 147.2 HUMAN 1 2.4664 8.8039 ESCSGLGSTSDDTDV-p Q14C86-6;S746-p ESCSGLGSTSDDTDV 0.839353804661943 0.676705173157879 0.038 0.0626666666666667 1.46959530171348 2.31667780924481 0.038 0.0626666666666667 0.712919460591053 0.586586709879956 0.38784996082459 0.577772927421171 Q14C86 GAPVD1 Q14C86.6.S746.p_GAPVD1 Q14C86-6_S746s _1_1_746_746 Q14C86-6 Q14C86-6|Q14C86-2|Q14C86-5|Q14C86-4|Q14C86-3|F8W9S7|B4DGD8 Isoform 6 of GTPase-activating protein and VPS9 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20177.20177.3 22.76 22.76 1.124 6 1 1 0 826.7026 2398.1241 S746s TMT10 735 (R) LQELESCSGLGsTSDDTDVR (E) LQELES(0.0)CS(0.0)GLGS(0.99)T(0.0)S(0.0)DDT(0.0)DVR C:Carbamidomethylation,s:Phosphorylated S GAPVD1 167648.8 2 8 268.1 394.98 HUMAN 1 1.4696 2.3167 ESDEEGHSPVLGGLG-p Q14676;S202-p ESDEEGHSPVLGGLG 0.219716131376416 0.123269878873734 0.234666666666667 0.174666666666667 12.6680600782108 11.9926802034782 0.234666666666667 0.174666666666667 0.0540995922934182 0.0632021685348706 2.45142161916289 2.32987464857945 Q14676 MDC1 Q14676.S202.p_MDC1 Q14676_S196sS202s_2_2_196_202 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32034.32034.5 31.61 26.55 3.705 12 2 2 0 1161.3273 5642.6732 S196s S202s TMT10 186 (R) TTSSSVIVPEsDEEGHsPVLGGLGPPFAFNLNSDTDVEEGQQPATEEASSAAR (R) T(0.0)T(0.0)S(0.0)S(0.0)S(0.0)VIVPES(0.99)DEEGHS(0.99)PVLGGLGPPFAFNLNS(0.0)DT(0.0)DVEEGQQPAT(0.0)EEAS(0.0)S(0.0)AAR s:Phosphorylated S MDC1 227803.2 19 57 6.1 1662.62 HUMAN 1 12.6681 11.9927 ESDFSGVTPQRQVVQ-p Q99459;T396-p ESDFSGVTPQRQVVQ 0.234975861639753 0.949375947070868 0.188 -0.00866666666666667 12.0551690304946 0.323396062400383 0.188 -0.00866666666666668 0.0622992899631404 0.928240244778069 2.34212384790067 -0.0943230309596262 Q99459 CDC5L Q99459.T396.p_CDC5L Q99459_T396t _1_1_396_396 Q99459 Q99459 Cell division cycle 5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15148.15148.3 10.64 10.64 1.328 4 1 1 0 774.3759 2241.1461 T396t TMT10 381 (K) GGLNTPLHESDFSGVtPQR (Q) GGLNT(0.0)PLHES(0.0)DFS(0.0)GVT(0.99)PQR t:Phosphorylated T CDC5L 92477.2 1 10 751.1 232.35 HUMAN 1 12.0552 -0.3234 ESDGPNMTENGLEDE-p P51116;T572-p ESDGPNMTENGLEDE 0.18863765659071 0.0807465529259923 0.378 0.506 14.2119265010863 14.4945455160829 0.378 0.506 0.0379146760714119 0.0355259293992089 2.73191218541574 2.78243822979973 P51116 FXR2 P51116.T572.p_FXR2 P51116_T572t _1_1_572_572 P51116 P51116 Fragile X mental retardation syndrome-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15309.15309.4 15.98 15.98 1.151 5 1 1 0 965.6701 3779.6922 T572t TMT10 553 (R) TDEDRTVMDGGLESDGPNMtENGLEDESRPQR (R) T(0.0)DEDRT(0.0)VMDGGLES(0.0)DGPNMT(0.99)ENGLEDES(0.0)RPQR t:Phosphorylated T FXR2 74564.3 1 6 844.1 213.98 HUMAN 1 14.2119 14.4945 ESDLGDVSEEHGEWN-p Q8IW35-2;S778-p ESDLGDVSEEHGEWN 0.298374898617246 0.0354987989976548 0.266 -0.347 9.87346218771948 19.5131143195657 0.266 -0.347 0.102956502582945 0.0111863542390546 1.95973467507459 -3.77180953657821 Q8IW35 CEP97 Q8IW35.2.S778.p_CEP97 Q8IW35-2_S778s _1_1_778_778 Q8IW35-2 Q8IW35-2 Isoform 2 of Centrosomal protein of 97 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14280.14280.4 14.18 13.92 6.581 3 1 1 0 737.3565 2866.4462 S778s TMT10 768 (R) YGKESDLGDVsEEHGEWNK (E) Y(0.0)GKES(0.0)DLGDVS(0.99)EEHGEWNK K:TMT10,s:Phosphorylated S CEP97 100762.5 1 10 759.1 230.22 HUMAN 1 9.8735 -19.5131 ESDPFRGSATDDFFK-p Q9UBC2-2;S672-p ESDPFRGSATDDFFK 0.0931955928815548 0.0261795709486929 -1.04066666666667 0.402333333333333 21.9154815377488 21.5066233149755 -1.04066666666667 0.402333333333333 0.00643356726824648 0.0070686693709734 -4.30262880266166 4.20568997329136 Q9UBC2 EPS15L1 Q9UBC2.2.S672.p_EPS15L1 Q9UBC2-2_S672s _1_1_672_672 Q9UBC2-2 Q9UBC2-3|Q9UBC2-2|M0R165 Isoform 2 of Epidermal growth factor receptor substrate 15-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20437.20437.4 11.71 7.36 1.742 3 1 1 0 654.336 2534.3494 S672s TMT10 665 (K) ESDPFRGsATDDFFKK (Q) ES(0.0)DPFRGS(0.99)AT(0.0)DDFFKK K:TMT10,s:Phosphorylated S EPS15L1 99718.3 5 14 109.1 576.24 HUMAN 1 -21.9155 21.5066 ESDSRASSPNSTVSN-p Q8WXG6;S830-p ESDSRASSPNSTVSN 0.349402740697395 0.849934979405794 0.127666666666667 0.0193333333333334 8.48280856824342 0.992060818073009 0.127666666666667 0.0193333333333334 0.141814011849301 0.79578164578932 1.71882972759356 0.271859031931872 Q8WXG6 MADD Q8WXG6.S830.p_MADD Q8WXG6_S830s _1_1_830_830 Q8WXG6 Q8WXG6|Q8WXG6-2|A0A0A0MRB5|Q8WXG6-3|Q8WXG6-7|Q8WXG6-4|Q8WXG6-5|Q8WXG6-8|Q8WXG6-6 MAP kinase-activating death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35575.35575.3 28.4 28.4 1.108 12 1 1 0 1055.4902 3084.4782 S830s TMT10 828 (R) ASsPNSTVSNTSTEGFGGIMSFASSLYR (N) AS(0.0)S(0.99)PNS(0.0)T(0.0)VS(0.0)NT(0.0)S(0.0)T(0.0)EGFGGIMS(0.0)FAS(0.0)S(0.0)LY(0.0)R s:Phosphorylated S MADD 184612.2 12 7 546.1 275.73 HUMAN 1 8.4828 0.9921 ESDVQEPTEPEDDLD-p P20042;T111-p ESDVQEPTEPEDDLD 0.197980912706229 0.390878526223893 -0.225333333333333 -0.0816666666666667 13.7101219143707 5.42416939821665 -0.225333333333333 -0.0816666666666667 0.0425586465978852 0.286802584204647 -2.63984889759186 -1.18099651035156 P20042 EIF2S2 P20042.T111.p_EIF2S2 P20042_T111t _1_1_111_111 P20042 P20042 Eukaryotic translation initiation factor 2 subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29509.29509.3 25.66 22.99 13.23 2 1 1 0 1204.2743 3530.8391 T111t TMT10 100 (K) DLKIESDVQEPtEPEDDLDIMLGNK (K) DLKIES(0.0)DVQEPT(0.99)EPEDDLDIMLGNK K:TMT10,t:Phosphorylated T EIF2S2 38730.1 12 5 622.1 259.62 HUMAN 1 -13.7101 -5.4242 ESEDDPESEPDDHEK-p P16383;S180-p ESEDDPESEPDDHEK 0.406926589278879 0.0468120353812948 0.118666666666667 0.235666666666667 7.2120358263243 17.7856861585144 0.118666666666667 0.235666666666667 0.19001873272668 0.0166506573687814 1.49808030419575 3.41626654446951 P16383 GCFC2 P16383.S180.p_GCFC2 P16383_S180s _1_1_180_180 P16383 P16383|P16383-4|P16383-3 GC-rich sequence DNA-binding factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5267.5267.3 19.5 19.5 4.212 2 1 1 0 765.9892 2215.9879 S180s TMT10 173 (R) ESEDDPEsEPDDHEK (R) ES(0.0)EDDPES(0.99)EPDDHEK K:TMT10,s:Phosphorylated S GCFC2 89953.6 2 1 2330.1 87.66 HUMAN 1 7.212 17.7857 ESEDKHESPASKERA-p Q8TDI0;S1610-p ESEDKHESPASKERA 0.35808920498366 0.0439441124282287 0.139666666666667 -0.279666666666667 8.29106568486317 18.1776387598851 0.139666666666667 -0.279666666666667 0.148215434502849 0.0152137446955943 1.68561872893279 -3.49540828224819 Q8TDI0 CHD5 Q8TDI0.S1610.p_CHD5 Q8TDI0_S1610s _1_1_1610_1610 Q8TDI0 Q8TDI0 Chromodomain-helicase-DNA-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21659.21659.5 19.84 14.06 2.166 3 1 1 0 743.1943 3631.9899 S1610s TMT10 1588 (R) QPLEVQALPAALDRVESEDKHEsPASK (E) QPLEVQALPAALDRVES(0.0)EDKHES(0.99)PAS(0.0)K K:TMT10,s:Phosphorylated S CHD5 224643 1 5 1884.1 109.13 HUMAN 1 8.2911 -18.1776 ESEDNKFSDDSDDDF-p O15164;S1025-p ESEDNKFSDDSDDDF 0.300478673172259 0.144594289197831 0.165666666666667 0.203333333333333 9.81029808224431 11.0627387986293 0.165666666666667 0.203333333333333 0.104464851629254 0.0782935742957668 1.94877082069756 2.16612130049741 O15164 TRIM24 O15164.S1025.p_TRIM24 O15164_S1025sS1028s_2_2_1025_1028 O15164 O15164|O15164-2 Transcription intermediary factor 1-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16434.16434.4 13.75 13.75 7.518 3 2 2 0 745.0623 2817.2851 S1025s S1028s TMT10 1017 (R) NESEDNKFsDDsDDDFVQPR (K) NES(0.0)EDNKFS(0.99)DDS(0.99)DDDFVQPR K:TMT10,s:Phosphorylated S TRIM24 118769 5 13 598.1 263.51 HUMAN 1 9.8103 11.0627 ESEDSQESVDSVTDS-p P16220;S114-p ESEDSQESVDSVTDS 0.181255766963219 0.232751465588296 0.262 0.147666666666667 14.6172743850943 8.33860847797728 0.262 0.147666666666667 0.0345360418161028 0.146601749206328 2.80697410899456 1.69329427493739 P16220 CREB1 P16220.S114.p_CREB1 P16220_S111sS114s_2_2_111_114 P16220 P16220|P16220-3 Cyclic AMP-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23151.23151.4 11.46 11.46 1.196 10 2 2 0 941.4419 3602.8074 S111s S114s TMT10 95 (K) RLFSGTQISTIAESEDsQEsVDSVTDSQK (R) RLFS(0.0)GT(0.0)QIS(0.0)T(0.0)IAES(0.0)EDS(0.99)QES(0.99)VDS(0.0)VT(0.0)DS(0.0)QK K:TMT10,s:Phosphorylated S CREB1 36915.7 2 5 2816.1 69.58 HUMAN 1 14.6173 8.3386 ESEKQQDSQPEEVMD-p Q9H307;S381-p ESEKQQDSQPEEVMD 0.786683265383705 0.00957046944143617 -0.051 0.586 2.01214024817406 28.47621117683 -0.051 0.586 0.629196032121347 0.00142029606010077 -0.511488909667716 5.97273527180206 Q9H307 PNN Q9H307.S381.p_PNN Q9H307_S381s _1_1_381_381 Q9H307 Q9H307|Q9H307-2 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.35737.35952.4 26.04 24.93 2.252 2 1 1 0 897.6925 3507.7802 S381s TMT10 374 (R) ESEKQQDsQPEEVMDVLEMVENVK (H) ES(0.0)EKQQDS(0.99)QPEEVMDVLEMVENVK K:TMT10,s:Phosphorylated S PNN 81726.4 74 5 180.1 480.36 HUMAN 1 -2.0121 28.4762 ESESEDSSDDEPLIK-p P35659;S307-p ESESEDSSDDEPLIK 0.992821359885708 0.110204808911674 0.00149999999999998 0.173333333333333 0.0643803680102083 12.6484748063591 0.00149999999999999 0.173333333333333 0.985285208873666 0.054344114843656 0.0193108170670671 2.44661350593322 P35659 DEK P35659.S307.p_DEK P35659_S306sS307s_2_2_306_307 P35659 P35659|B4DFG0 Protein DEK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11981.11981.4 8.78 8.78 3.267 6 2 2 0 975.7438 3740.0211 S306s S307s TMT10 292 (K) KNQNSSKKESESEDssDDEPLIK (K) KNQNS(0.0)S(0.0)KKES(0.0)ES(0.0)EDS(0.99)S(0.99)DDEPLIK K:TMT10,s:Phosphorylated S DEK 42958.8 3 10 488.1 294.94 HUMAN 2 0.0644 12.6485 ESESKTKSHDDGNID-p P18583-5;S142-p ESESKTKSHDDGNID 0.213993143458835 0.00785957634304923 -0.509666666666667 0.492333333333333 12.9026927169021 30.0205663302628 -0.509666666666667 0.492333333333333 0.0512543497731796 0.000995275622596839 -2.49354736893909 6.42818507879926 P18583 SON P18583.5.S142.p_SON P18583-5_S142s _1_1_142_142 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-2|P18583-6|P18583-8 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.29400.29400.4 17.1 17.1 4.948 6 1 1 0 986.4776 3862.9387 S142s TMT10 142 (K) sHDDGNIDLESDSFLKFDSEPSAVALELPTR (A) S(0.99)HDDGNIDLES(0.0)DS(0.0)FLKFDS(0.0)EPS(0.0)AVALELPT(0.0)R K:TMT10,s:Phosphorylated S SON 267429.6 4 5 45.1 778.56 HUMAN 1 -12.9027 30.0206 ESESTKGSADCLPKL-p A0A0U1RR27;S993-p ESESTKGSADCLPKL 0.221440669353428 0.0304052289631587 -0.193 0.343333333333333 12.6063697161255 20.5101746571169 -0.193 0.343333333333333 0.0548735463297223 0.00889165358209315 -2.44037285009578 3.98545351063226 A0A0U1RR27 NotFound A0A0U1RR27.S993.p_NotFound A0A0U1RR27_S993s _1_1_993_993 A0A0U1RR27 A0A0U1RR27|Q7Z401-2 C-myc promoter-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12959.12959.3 11.33 11.33 1.147 8 1 1 0 1023.8204 2989.4697 S993s TMT10 978 (K) GSDCSSLSESESTKGsADCLPK (L) GS(0.0)DCS(0.0)S(0.0)LS(0.0)ES(0.0)ES(0.0)T(0.0)KGS(0.99)ADCLPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DENND4A 217514.7 1 3 399.1 328.24 HUMAN 1 -12.6064 20.5102 ESESWDNSEAEEEEK-p Q8NFG4;S302-p ESESWDNSEAEEEEK 0.989464151490073 0.238757525326045 -0.00266666666666667 0.121333333333333 0.0941548490771424 8.1945183194646 -0.00266666666666667 0.121333333333333 0.97855336586487 0.151547287705391 -0.0281476181682501 1.66834608840264 Q8NFG4 FLCN Q8NFG4.S302.p_FLCN Q8NFG4_S302s _1_1_302_302 Q8NFG4 Q8NFG4 Folliculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25483.25483.4 26.75 26.75 1.226 5 1 1 0 1036.478 4062.9192 S302s TMT10 289 (K) LADLEEESESWDNsEAEEEEKAPVLPESTEGR (E) LADLEEES(0.0)ES(0.0)WDNS(0.99)EAEEEEKAPVLPES(0.0)T(0.0)EGR K:TMT10,s:Phosphorylated S FLCN 65442.1 3 5 1292.1 157.11 HUMAN 1 -0.0942 8.1945 ESETPGKSPEKKPKI-p O76021;S427-p ESETPGKSPEKKPKI 0.136368951978396 0.000952253650599092 -0.819 -1.98733333333333 17.7496434049728 56.6585402155986 -0.819 -1.98733333333333 0.0167894186876713 2.15846980889775e-06 -3.41177404437917 -20.9056928208802 O76021 RSL1D1 O76021.S427.p_RSL1D1 O76021_S427s _1_1_427_427 O76021 O76021|O76021-2 Ribosomal L1 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7405.7405.2 15.88 8.78 2.588 3 1 1 0 1049.5544 2018.1373 S427s TMT10 418 (K) AAESETPGKsPEK (K) AAES(0.0)ET(0.0)PGKS(0.99)PEK K:TMT10,s:Phosphorylated S RSL1D1 55199.7 9 9 643.1 254.92 HUMAN 1 -17.7496 -56.6585 ESETRARSPSVAAMA-p P25325-2;S15-p ESETRARSPSVAAMA 0.303898709167394 0.162135055402848 0.174 0.142333333333333 9.69153369694711 10.3891808739263 0.174 0.142333333333333 0.107361020340845 0.0914285669313454 1.92816559529624 2.04854807831961 P25325 MPST P25325.2.S15.p_MPST P25325-2_S15s _1_1_15_15 P25325-2 P25325-2 Isoform 2 of 3-mercaptopyruvate sulfurtransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12763.12966.3 18.88 18.88 2.788 3 1 1 0 670.9987 1931.0153 S15s TMT10 13 (R) ARsPSVAAMASPQLCR (A) ARS(0.99)PS(0.0)VAAMAS(0.0)PQLCR C:Carbamidomethylation,s:Phosphorylated S MPST 35534.3 15 1 4149.1 36.6 HUMAN 1 9.6915 10.3892 ESFPELPSEE_____-p Q9BZQ8;S926-p ESFPELPSEE_____ 0.254996768567997 0.00859436685518713 -0.230666666666667 -0.514 11.2911877241606 29.3064796586614 -0.230666666666667 -0.514 0.0742815962135846 0.00117314591889025 -2.20720372363074 -6.21431080507842 Q9BZQ8 FAM129A Q9BZQ8.S926.p_FAM129A Q9BZQ8_S926s _1_1_926_926 Q9BZQ8 Q9BZQ8 Protein Niban HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26252.26252.5 21.18 15.91 1.383 3 1 1 0 1083.3219 5332.6199 S926s TMT10 888 (R) IHECQWVVEDAPNPDVLLSHKDDVKEGEGGQESFPELPsEE (-) IHECQWVVEDAPNPDVLLS(0.0)HKDDVKEGEGGQES(0.0)FPELPS(0.99)EE C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM129A 104102.7 4 8 641.1 254.96 HUMAN 1 -11.2912 -29.3065 ESGAPSPSPQKHGSL-p Q9UL54;S827-p ESGAPSPSPQKHGSL 0.487407533037198 0.0144308661130214 -0.102 -0.472 5.75261860875769 25.5170282162557 -0.102 -0.472 0.265912124070019 0.00280735399281291 -1.24036651582091 -5.16930076633989 Q9UL54 TAOK2 Q9UL54.S827.p_TAOK2 Q9UL54_S827s _1_1_827_827 Q9UL54 Q9UL54 Serine/threonine-protein kinase TAO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16562.16562.3 13.43 13.43 1.143 3 1 1 0 679.0225 1955.085 S827s TMT10 816 (R) ILGEESGAPSPsPQK (H) ILGEES(0.0)GAPS(0.0)PS(0.99)PQK K:TMT10,s:Phosphorylated S TAOK2 139047.7 1 6 2238.99 92.22 HUMAN 1 -5.7526 -25.517 ESGEGEISPQREVSR-p Q8WWI1-3;S692-p ESGEGEISPQREVSR 0.674676494772318 0.0758304493142058 0.059 0.304 3.20199258953986 14.8683379069473 0.059 0.304 0.47841054208618 0.032596142617938 0.761148982286355 2.85195310673922 Q8WWI1 LMO7 Q8WWI1.3.S692.p_LMO7 Q8WWI1-3_S692s _1_1_692_692 Q8WWI1-3 Q8WWI1|Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22699.22699.3 19.06 19.06 1.634 8 1 1 0 921.0989 2681.3137 S692s TMT10 672 (K) ATLSSTSGLDLMSESGEGEIsPQR (E) AT(0.0)LS(0.0)S(0.0)T(0.0)S(0.0)GLDLMS(0.0)ES(0.0)GEGEIS(0.99)PQR s:Phosphorylated S LMO7 154694.3 2 19 61.1 704.74 HUMAN 1 3.202 14.8683 ESGGGGGSGEDEQFL-p Q03164-3;S142-p ESGGGGGSGEDEQFL 0.456337979070524 0.0648334686466235 0.112 0.216333333333333 6.28256769459473 15.811361543091 0.112 0.216333333333333 0.235365731132621 0.0262339596175921 1.33474854170082 3.02994319944733 Q03164 KMT2A Q03164.3.S142.p_KMT2A Q03164-3_S142s _1_1_142_142 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27431.27431.3 18.48 18.48 6.049 3 1 1 0 1029.115 3005.3598 S142s TMT10 131 (R) AVFGESGGGGGsGEDEQFLGFGSDEEVR (V) AVFGES(0.0)GGGGGS(0.99)GEDEQFLGFGS(0.0)DEEVR s:Phosphorylated S KMT2A 436608.3 3 1 26.1 936.8 HUMAN 1 6.2826 15.8114 ESGGIEDSPDRGACS-p Q9H4G0;S678-p ESGGIEDSPDRGACS 0.702883247704392 0.0749200727374685 0.0596666666666667 0.201666666666667 2.87752956934453 14.9380655148971 0.0596666666666667 0.201666666666667 0.515521809422337 0.0320769781648456 0.695425473741418 2.86498330050118 Q9H4G0 EPB41L1 Q9H4G0.S678.p_EPB41L1 Q9H4G0_S678s _1_1_678_678 Q9H4G0 Q9H4G0|A0A0C4DH22|Q9H4G0-2|Q9H4G0-3 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25877.25877.5 29.45 27.18 1.105 10 1 1 0 1061.6915 5224.4761 S678s TMT10 664 (K) GAPSQDDESGGIEDsPDRGACSTPDMPQFEPVKTETMTVSSLAIR (K) GAPS(0.0)QDDES(0.0)GGIEDS(0.99)PDRGACS(0.0)T(0.0)PDMPQFEPVKT(0.0)ET(0.0)MT(0.0)VS(0.0)S(0.0)LAIR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EPB41L1 99071.6 8 18 174.1 483.37 HUMAN 1 2.8775 14.9381 ESGIQLGTPREKVPA-p E7ERK9;T107-p ESGIQLGTPREKVPA 0.911438071310171 0.112300247886504 0.0163333333333333 -0.204666666666667 0.790096127976835 12.5280540205932 0.0163333333333333 -0.204666666666667 0.833662731887208 0.0558720489193537 0.220364502991388 -2.42508910440746 E7ERK9 NotFound E7ERK9.T107.p_NotFound E7ERK9_T107t _1_1_107_107 E7ERK9 E7ERK9|Q9UI10-2|Q9UI10-3 Translation initiation factor eIF-2B subunit delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17213.17213.3 14.51 8.5 3.254 2 1 1 0 731.3957 2112.2065 T107t TMT10 97 (R) ELPESGIQLGtPREK (V) ELPES(0.0)GIQLGT(0.99)PREK K:TMT10,t:Phosphorylated T EIF2B4 60284.1 2 2 2532.1 79.61 HUMAN 1 0.7901 -12.5281 ESGLSDVTKDQ____-p Q8WUY1;T205-p ESGLSDVTKDQ____ 0.336559539837921 0.469651871890627 0.164333333333333 -0.0876666666666666 8.81699337522222 4.37536272029323 0.164333333333333 -0.0876666666666667 0.131310865077047 0.365143629392014 1.77668411322922 -0.988055173489086 Q8WUY1 THEM6 Q8WUY1.T205.p_THEM6 Q8WUY1_T205t _1_1_205_205 Q8WUY1 Q8WUY1 Protein THEM6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14505.14505.3 9.03 9.03 9.028 3 1 1 0 616.6328 1767.9199 T205t TMT10 197 (R) MESGLSDVtKDQ (-) MES(0.0)GLS(0.0)DVT(0.99)KDQ K:TMT10,t:Phosphorylated T THEM6 24149.8 1 1 6859.1 9.03 HUMAN 1 8.817 -4.3754 ESGMQNMSIHTKTTS-p P05787;S410-p ESGMQNMSIHTKTTS 0.137689822550301 0.580889661130855 -0.337333333333333 0.064 17.6268959496658 3.18396471246125 -0.337333333333333 0.064 0.0172707184793744 0.480400586291603 -3.38714594715636 0.757426107724998 P05787 KRT8 P05787.S410.p_KRT8 P05787_S410s _1_1_410_410 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20632.20632.5 20.21 18.42 3.705 4 1 1 0 586.2954 2847.4745 S410s TMT10 394 (K) LLEGEESRLESGMQNMsIHTK (T) LLEGEES(0.0)RLES(0.0)GMQNMS(0.99)IHT(0.0)K K:TMT10,s:Phosphorylated S KRT8 53703.3 26 29 69.1 672.47 HUMAN 1 -17.6269 3.184 ESGQEGSTDNDDSSS-p O75362;T322-p ESGQEGSTDNDDSSS 0.13016481000448 0.428445361284397 0.529333333333333 -0.139 18.3117539387549 4.90083279730035 0.529333333333333 -0.139 0.0147511067576366 0.32353161099111 3.52563530015019 -1.08563773310289 O75362 ZNF217 O75362.T322.p_ZNF217 O75362_T322t _1_1_322_322 O75362 O75362 Zinc finger protein 217 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13794.13794.4 13.68 13.68 1.168 6 1 1 0 867.4091 3386.6473 T322t TMT10 307 (K) VAICQEVKESGQEGStDNDDSSSEK (E) VAICQEVKES(0.0)GQEGS(0.0)T(0.99)DNDDS(0.0)S(0.0)S(0.0)EK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ZNF217 117152.8 1 3 394.1 330.8 HUMAN 1 18.3118 -4.9008 ESGRGTASPKEFYAK-p O00291;S857-p ESGRGTASPKEFYAK 0.564664126408835 0.622228177881123 -0.0936666666666667 -0.056 4.57361009276979 2.80013576488963 -0.0936666666666667 -0.056 0.34885021158422 0.524791054489115 -1.02530615111019 -0.679425025729533 O00291 HIP1 O00291.S857.p_HIP1 O00291_S857s _1_1_857_857 O00291 O00291 Huntingtin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7879.7879.3 7.78 4.4 7.782 3 1 1 0 623.6682 1789.022 S857s TMT10 847 (R) EIVESGRGTAsPK (E) EIVES(0.0)GRGT(0.0)AS(0.99)PK K:TMT10,s:Phosphorylated S HIP1 117303.1 1 1 3390.2 52.21 HUMAN 1 -4.5736 -2.8001 ESGRKVQSGNINAAK-p P49368;S24-p ESGRKVQSGNINAAK 0.683630915493581 0.329874322869035 -0.0726666666666667 0.108 3.09652212471642 6.37828226719402 -0.0726666666666667 0.108 0.490171196418919 0.230235226968937 -0.739949762112556 1.35134219031529 P49368 CCT3 P49368.S24.p_CCT3 P49368_S24s _1_1_24_24 P49368 P49368|P49368-2 T-complex protein 1 subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9924.9924.2 10.94 10.94 99 1 1 1 0 770.4187 1459.8633 S24s TMT10 22 (K) VQsGNINAAK (T) VQS(1.0)GNINAAK K:TMT10,s:Phosphorylated S CCT3 61103.4 1 2 2149.1 95.76 HUMAN 1 -3.0965 6.3783 ESGTIFGSQIKDAPG-p Q9H0E9-2;S694-p ESGTIFGSQIKDAPG 0.133015503975615 0.0169351107639072 -0.298333333333333 0.459666666666667 18.0556184256947 24.4378179807189 -0.298333333333333 0.459666666666667 0.0156472548992619 0.00359930128891231 -3.47353012649277 4.89685454653431 Q9H0E9 BRD8 Q9H0E9.2.S694.p_BRD8 Q9H0E9-2_S694s _1_1_694_694 Q9H0E9-2 Q9H0E9|Q9H0E9-2|B5MCW3|Q9H0E9-4|Q9H0E9-3 Isoform 2 of Bromodomain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20256.20256.3 11.91 10.72 4.754 3 1 1 0 611.9859 1753.9736 S694s TMT10 686 (K) EESGTIFGsQIK (D) EES(0.0)GT(0.0)IFGS(0.99)QIK K:TMT10,s:Phosphorylated S BRD8 103294.1 1 8 654.1 253.82 HUMAN 1 -18.0556 24.4378 ESHKRIHTGEKPYRC-p Q8N4W9;T618-p ESHKRIHTGEKPYRC 0.859880254313328 0.00356137322963082 -0.042 -0.677 1.28058989875089 36.5096593559061 -0.042 -0.677 0.744630824422215 0.000223374742262187 -0.342852480813971 -8.6669385626579 Q8N4W9 ZNF808 Q8N4W9.T618.p_ZNF808 Q8N4W9_T618t _1_1_618_618 Q8N4W9 A8MQ14|Q9H7R5-2|Q8TF47|Q8N823-2|A0A087X0M6|Q96IR2|Q63HK3|Q8N4W9|Q8N4W9-2|Q9HCG1|M0QZI7|P51523|F5H630|P17097-2|Q8N9F8|O75346|Q15937|A6NP11|Q9NQZ8|B4DXR9|A0A087WTY0|Q6PDB4|Q9H8G1|Q96LW1|O60765|F5H290|F5H032|O75346-2|Q8IYX0|A0A1W2PQL4|A0A087X2B0|A0A1W2PRC0|Q15929 Zinc finger protein 808 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6085.6085.3 7.18 7.18 7.181 2 1 1 0 546.9629 1558.9106 T618t TMT10 616 (R) IHtGEKPYR (C) IHT(0.99)GEKPY(0.0)R K:TMT10,t:Phosphorylated T ZNF808 108246.1 1 97 240.98 415.72 HUMAN 1 -1.2806 -36.5097 ESHSNDQSPQIRASP-p B5MBZ0;S138-p ESHSNDQSPQIRASP 0.506520727045966 0.00219928027114295 -0.097 -0.819 5.45119645712854 41.264192462691 -0.097 -0.819 0.285023293601972 7.47447603424895e-05 -1.18613731889538 -10.7148545770321 B5MBZ0 EML4 B5MBZ0.S138.p_EML4 B5MBZ0_S138s _1_1_138_138 B5MBZ0 B5MBZ0 Echinoderm microtubule-associated protein-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4030.4030.4 16.01 16.01 5.03 3 1 1 0 670.5983 2599.4043 S138s TMT10 127 (R) EKKEESHSNDQsPQIR (A) EKKEES(0.0)HS(0.0)NDQS(0.99)PQIR K:TMT10,s:Phosphorylated S EML4 111259.7 2 3 586.1 265.11 HUMAN 1 -5.4512 -41.2642 ESHTEAISDAETSSS-p Q5QJE6;S184-p ESHTEAISDAETSSS 0.781262128607466 0.785569981359402 0.041 0.0293333333333334 2.06005830874938 1.45404266874847 0.041 0.0293333333333334 0.622291930168281 0.715477091932686 0.522061682099606 0.384147831598195 Q5QJE6 DNTTIP2 Q5QJE6.S184.p_DNTTIP2 Q5QJE6_S184s _1_1_184_184 Q5QJE6 Q5QJE6|J3KP30 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20919.20919.3 27.78 27.78 3.464 13 1 1 0 1212.5569 3555.6772 S184s TMT10 170 (K) SLTDPSQESHTEAIsDAETSSSDISFSGIATR (R) S(0.0)LT(0.0)DPS(0.0)QES(0.0)HT(0.0)EAIS(0.99)DAET(0.0)S(0.0)S(0.0)S(0.0)DIS(0.0)FS(0.0)GIAT(0.0)R s:Phosphorylated S DNTTIP2 84866.9 2 8 448.1 309.47 HUMAN 1 2.0601 1.454 ESIAESKSPEMSMQE-p O60502;S511-p ESIAESKSPEMSMQE 0.114688242267433 0.00272422972588299 -0.841333333333333 0.92 19.5711502782526 38.9424105024577 -0.841333333333333 0.92 0.0110378623086497 0.000127573053244955 -3.78751306768942 9.66569872620634 O60502 MGEA5 O60502.S511.p_MGEA5 O60502_S511s _1_1_511_511 O60502 O60502|O60502-4|O60502-2|O60502-3 Protein O-GlcNAcase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22326.22326.4 25.09 25.09 1.175 7 1 1 0 1100.0121 4317.0486 S511s TMT10 504 (K) ESIAESKsPEMSMQEDCISDIAPMQTDEQTNK (E) ES(0.0)IAES(0.0)KS(0.99)PEMS(0.0)MQEDCIS(0.0)DIAPMQT(0.0)DEQT(0.0)NK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MGEA5 103997.3 1 3 1909.1 107.89 HUMAN 1 -19.5712 38.9424 ESIDRVYSLDDIRRY-p Q14566;S568-p ESIDRVYSLDDIRRY 0.532816026669107 0.698611546022269 0.0866666666666667 0.048 5.05949406106641 2.14057096837168 0.0866666666666667 0.048 0.31192529457422 0.610861709437983 1.11494962179172 0.539647941175246 Q14566 MCM6 Q14566.S568.p_MCM6 Q14566_S568s _1_1_568_568 Q14566 Q14566 DNA replication licensing factor MCM6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20324.20324.4 15.55 10.24 4.303 3 1 1 0 572.7942 2208.1822 S568s TMT10 559 (R) IEESIDRVYsLDDIRR (Y) IEES(0.0)IDRVY(0.0)S(0.99)LDDIRR s:Phosphorylated S MCM6 93857.5 2 5 1039.1 185.36 HUMAN 1 5.0595 2.1406 ESKDAVPTE______-p O43823;T691-p ESKDAVPTE______ 0.15698322903478 0.746170564607943 0.282 -0.0503333333333334 16.1330965173381 1.75539931261764 0.282 -0.0503333333333334 0.0243607328006189 0.667513523526253 3.09378808450202 -0.453874842775862 O43823 AKAP8 O43823.T691.p_AKAP8 O43823_T691t _1_1_691_691 O43823 O43823 A-kinase anchor protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18593.18593.4 16.27 16.27 2.221 3 1 1 0 780.8821 3040.5363 T691t TMT10 667 (R) VAPAPAAADAEVEQTDAESKDAVPtE (-) VAPAPAAADAEVEQT(0.0)DAES(0.0)KDAVPT(0.99)E K:TMT10,t:Phosphorylated T AKAP8 76677.5 1 8 923.1 199.94 HUMAN 1 16.1331 -1.7554 ESKEANSSPGLGTPL-p O15018;S841-p ESKEANSSPGLGTPL 0.465616510186216 0.694231258802476 0.106 -0.0473333333333333 6.1249441450582 2.17634413780404 0.106 -0.0473333333333333 0.244065045723026 0.605850661231927 1.30679092750441 -0.547444318777731 O15018 PDZD2 O15018.S841.p_PDZD2 O15018_S841s _1_1_841_841 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15603.15603.2 10.05 10.05 1.124 3 1 1 0 904.983 1728.9896 S841s TMT10 837 (K) EANSsPGLGTPLK (S) EANS(0.0)S(0.99)PGLGT(0.0)PLK K:TMT10,s:Phosphorylated S PDZD2 304146 2 6 85.1 628.64 HUMAN 1 6.1249 -2.1763 ESKGNLESPKQGSNK-p O15018;S491-p ESKGNLESPKQGSNK 0.0424367151380083 0.013555130631465 -0.597333333333333 -0.448666666666667 30.655191946353 25.9609557156857 -0.597333333333333 -0.448666666666667 0.000859965057931509 0.00253457080724009 -6.63397061184659 -5.28441891450492 O15018 PDZD2 O15018.S491.p_PDZD2 O15018_S491s _1_1_491_491 O15018 O15018 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8221.8221.3 10.22 6.72 8.357 2 1 1 0 676.036 1946.1274 S491s TMT10 487 (K) GNLEsPKQGSNK (I) GNLES(0.99)PKQGS(0.0)NK K:TMT10,s:Phosphorylated S PDZD2 304146 2 3 85.1 628.64 HUMAN 1 -30.6552 -25.961 ESKLDSHSDDDTKDN-p Q5VT06;S1807-p ESKLDSHSDDDTKDN 0.324777608981404 0.0922576702256514 0.148 -0.324333333333333 9.14961325682058 13.6904299283299 0.148 -0.324333333333333 0.121629430793635 0.042752056180558 1.83426484259012 -2.63471635545567 Q5VT06 CEP350 Q5VT06.S1807.p_CEP350 Q5VT06_S1807s _1_1_1807_1807 Q5VT06 Q5VT06 Centrosome-associated protein 350 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6901.6901.4 16 10.61 2.032 5 1 1 0 615.5535 2379.2243 S1807s TMT10 1797 (K) SAGESKLDSHsDDDTK (D) S(0.0)AGES(0.0)KLDS(0.0)HS(0.99)DDDT(0.0)K K:TMT10,s:Phosphorylated S CEP350 352521.4 3 15 265.1 395.34 HUMAN 1 9.1496 -13.6904 ESKLYNGSEKDSSTS-p Q9BZF1;S105-p ESKLYNGSEKDSSTS 0.235442260231975 0.244729176917365 0.203 -0.114333333333333 12.0374118645453 8.055173832556 0.203 -0.114333333333333 0.0625545369357993 0.15648856811916 2.33897215028107 -1.64420553287021 Q9BZF1 OSBPL8 Q9BZF1.S105.p_OSBPL8 Q9BZF1_S105s _1_1_105_105 Q9BZF1 Q9BZF1|Q9BZF1-2|Q9BZF1-3 Oxysterol-binding protein-related protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9972.9972.3 10.64 10.64 2.324 7 1 1 0 757.3897 2190.1857 S105s TMT10 101 (K) LYNGsEKDSSTSSK (L) LY(0.0)NGS(0.99)EKDS(0.0)S(0.0)T(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S OSBPL8 101821.3 2 6 1293.1 156.92 HUMAN 1 12.0374 -8.0552 ESKSNAATPTKGPEG-p Q8TEK3;T355-p ESKSNAATPTKGPEG 0.149469437057511 0.000993050805672115 -0.276666666666667 -1.246 16.6351832192789 52.7768101736918 -0.276666666666667 -1.246 0.0217010964948952 5.27617245909967e-06 -3.19112232979844 -17.6914197980794 Q8TEK3 DOT1L Q8TEK3.T355.p_DOT1L Q8TEK3_T355t _1_1_355_355 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6769.6769.4 15.87 15.87 3.887 3 1 1 0 507.0308 1945.1322 T355t TMT10 351 (K) SNAAtPTKGPEGK (V) S(0.0)NAAT(0.99)PT(0.0)KGPEGK K:TMT10,t:Phosphorylated T DOT1L 185648.6 3 2 132.1 534.85 HUMAN 1 -16.6352 -52.7768 ESKSSAMSSDGSLAE-p Q9NZB2-6;S1072-p ESKSSAMSSDGSLAE 0.202089387369954 0.00863269704744706 0.195333333333333 0.445333333333333 13.4804841230575 29.2818604875337 0.195333333333333 0.445333333333333 0.0448695369522778 0.00117981510274319 2.59801879714029 6.20703916578258 Q9NZB2 FAM120A Q9NZB2.6.S1072.p_FAM120A Q9NZB2-6_S1072sS1073sS1076s_3_3_1072_1076 Q9NZB2-6 Q9NZB2-6|Q9NZB2-4 Isoform F of Constitutive coactivator of PPAR-gamma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20845.20845.4 15.91 15.91 2.669 7 3 3 0 996.4153 3740.7566 S1072s S1073s S1076s N1080n N1093n TMT10 1068 (K) SSAMssDGsLAEnGVMAEEKPAPQMnGSTGDAR (A) S(0.0)S(0.0)AMS(0.99)S(0.99)DGS(0.99)LAEN(1.0)GVMAEEKPAPQMN(1.0)GS(0.0)T(0.0)GDAR K:TMT10,s:Phosphorylated S,n:Deamidated FAM120A 126524.7 5 16 839.1 214.86 HUMAN 1 13.4805 29.2819 ESKTLVLSNLSYSAT-p P19338;S491-p ESKTLVLSNLSYSAT 0.249516894458771 0.154592122340389 0.168333333333333 0.167333333333333 11.5047907858178 10.6619721740445 0.168333333333333 0.167333333333333 0.0707165266377618 0.085862352355688 2.2447933999587 2.09607807556717 P19338 NCL P19338.S491.p_NCL P19338_S491s _1_1_491_491 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36798.36798.3 14.43 14.43 1.167 7 1 1 0 1013.8568 2959.5916 S491s TMT10 487 (K) TLVLsNLSYSATEETLQEVFEK (A) T(0.0)LVLS(0.99)NLS(0.0)Y(0.0)S(0.0)AT(0.0)EET(0.0)LQEVFEK K:TMT10,s:Phosphorylated S NCL 76670.1 1 15 114.1 570.88 HUMAN 1 11.5048 10.662 ESLADGGSASPIKDQ-p Q9HB96;S247-p ESLADGGSASPIKDQ 0.515757067329565 0.0870683547880949 -0.151333333333333 -0.188 5.31022271475869 14.0352855558084 -0.151333333333333 -0.188 0.294427064193338 0.0394885734104897 -1.1606163526632 -2.69777599713017 Q9HB96 FANCE Q9HB96.S247.p_FANCE Q9HB96_S247sS249s_2_2_247_249 Q9HB96 Q9HB96 Fanconi anemia group E protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26820.26820.4 8.95 8.95 5.748 4 2 2 0 787.6584 2987.669 S247s S249s TMT10 238 (K) SLESLADGGsAsPIKDQPVMAVK (T) S(0.0)LES(0.0)LADGGS(0.99)AS(0.99)PIKDQPVMAVK K:TMT10,s:Phosphorylated S FANCE 59451.6 2 4 2163.1 94.82 HUMAN 1 -5.3102 -14.0353 ESLDNLDSPRSNSWR-p Q8WWI1-3;S1182-p ESLDNLDSPRSNSWR 0.379753282388513 0.29668059704502 0.159 -0.204666666666667 7.76658783984921 6.96605456718198 0.159 -0.204666666666667 0.167240407087275 0.201091884143004 1.59464189484641 -1.45466998791757 Q8WWI1 LMO7 Q8WWI1.3.S1182.p_LMO7 Q8WWI1-3_S1182s _1_1_1182_1182 Q8WWI1-3 Q8WWI1|Q8WWI1-2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8266.8266.3 11.39 9.84 6.796 2 1 1 0 556.6038 1587.8288 S1182s TMT10 1173 (R) RGESLDNLDsPR (S) RGES(0.0)LDNLDS(0.99)PR s:Phosphorylated S LMO7 154694.3 1 28 61.1 704.74 HUMAN 1 7.7666 -6.9661 ESLDPAFSPRMPSSG-p Q15018;S280-p ESLDPAFSPRMPSSG 0.966278821995701 0.0354903041185376 -0.00666666666666667 -0.418333333333333 0.288164241609449 19.515300970567 -0.00666666666666667 -0.418333333333333 0.935801152759985 0.0111807233833006 -0.0843629135538856 -3.77227104426296 Q15018 FAM175B Q15018.S280.p_FAM175B Q15018_S280s _1_1_280_280 Q15018 Q15018 BRISC complex subunit Abraxas 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19303.19303.3 20.58 18.09 6.358 3 1 1 0 624.2939 1790.8945 S280s TMT10 269 (R) QMPSESLDPAFsPR (M) QMPS(0.0)ES(0.0)LDPAFS(0.99)PR s:Phosphorylated S ABRAXAS2 47128.2 2 3 3052.1 62.08 HUMAN 1 -0.2882 -19.5153 ESLDQAESPTFPYLN-p Q9Y2L1;S730-p ESLDQAESPTFPYLN 0.871586520393146 0.0207823149307202 0.0243333333333333 0.404333333333333 1.16846895050693 23.0088858337109 0.0243333333333333 0.404333333333333 0.76410511155746 0.00500162833427755 0.315619116823346 4.55142823225214 Q9Y2L1 DIS3 Q9Y2L1.S730.p_DIS3 Q9Y2L1_S730s _1_1_730_730 Q9Y2L1 Q9Y2L1 Exosome complex exonuclease RRP44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.36693.36693.3 15.38 15.38 1.727 6 1 1 0 925.4667 2694.4188 S730s TMT10 720 (K) SLAESLDQAEsPTFPYLNTLLR (I) S(0.0)LAES(0.0)LDQAES(0.99)PT(0.0)FPY(0.0)LNT(0.0)LLR s:Phosphorylated S DIS3 110084.8 1 4 3526.1 49.02 HUMAN 1 1.1685 23.0089 ESLHRIPSAPVIPTH-p Q9BZF2;S226-p ESLHRIPSAPVIPTH 0.413618121613695 0.749856330067886 0.116333333333333 0.032 7.07018915778872 1.72774124588688 0.116333333333333 0.032 0.196327476416753 0.671778152123325 1.47329394738599 0.44757757616356 Q9BZF2 OSBPL7 Q9BZF2.S226.p_OSBPL7 Q9BZF2_S226s _1_1_226_226 Q9BZF2 Q9BZF2|J3QLK7|Q9BZF2-2 Oxysterol-binding protein-related protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12552.12552.4 11.24 11.24 11.235 5 1 1 0 610.3297 2358.3343 S226s Hydrogen 224 (R) IPsAPVIPTHQASVTTERPK (K) IPS(0.99)APVIPT(0.0)HQAS(0.0)VT(0.0)T(0.0)ERPK K:TMT10-Lys-Only,s:Phosphorylated S OSBPL7 96456.8 1 3 4385.1 32.2 HUMAN 1 7.0702 1.7277 ESLKKCLSVMEAKVK-p P49588-2;S783-p ESLKKCLSVMEAKVK 0.455145758341492 0.353981364800064 0.109666666666667 0.132 6.30410173413502 5.98096963438113 0.109666666666667 0.132 0.234201583207843 0.25229174264817 1.3385611753745 1.28086892065537 P49588 AARS P49588.2.S783.p_AARS P49588-2_S783s _1_1_783_783 P49588-2 P49588-2 Isoform 2 of Alanine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18076.18076.2 11.69 11.69 99 1 1 1 0 738.3741 1395.774 S783s TMT10 781 (K) CLsVMEAK (V) CLS(1.0)VMEAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AARS 110057.1 1 4 2191.1 93.87 HUMAN 1 6.3041 5.981 ESLLLEDSEEEEGDL-p Q9H992;S544-p ESLLLEDSEEEEGDL 0.608773679979832 0.0478179133663351 -0.0753333333333333 -0.243666666666667 3.99006928010271 17.661419251078 -0.0753333333333333 -0.243666666666667 0.399018537034726 0.0171339728696219 -0.915230873120026 -3.3913534869858 Q9H992 MARCH7 Q9H992.S544.p_MARCH7 Q9H992_S544s _1_1_544_544 Q9H992 Q9H992|Q9H992-2|F5H6W4 E3 ubiquitin-protein ligase MARCH7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21884.21884.3 22.19 22.19 22.191 2 1 1 0 934.7895 2722.3857 S544s TMT10 535 (K) IKESLLLEDsEEEEGDLCR (I) IKES(0.0)LLLEDS(0.99)EEEEGDLCR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MARCH7 78677.3 4 2 3567.1 48.05 HUMAN 1 -3.9901 -17.6614 ESLPGAVSPLSGRRR-p Q69YU3;S392-p ESLPGAVSPLSGRRR 0.855856838033951 0.320516905067553 -0.027 -0.124666666666667 1.31496286665586 6.53548777368877 -0.027 -0.124666666666667 0.738760579567921 0.222050227585815 -0.351118724437103 -1.37907582005169 Q69YU3 ANKRD34A Q69YU3.S392.p_ANKRD34A Q69YU3_S392s _1_1_392_392 Q69YU3 Q69YU3 Ankyrin repeat domain-containing protein 34A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15387.15387.3 16.04 15.41 2.668 4 1 1 0 641.3244 1841.9919 S392s TMT10 382 (R) QSQESLPGAVsPLSGR (R) QS(0.0)QES(0.0)LPGAVS(0.99)PLS(0.0)GR s:Phosphorylated S ANKRD34A 52919.9 3 8 922.1 199.97 HUMAN 1 -1.315 -6.5355 ESLPRPLSPTKLTPI-p Q96KQ4;S671-p ESLPRPLSPTKLTPI 0.146592070323056 0.424707276125662 -0.265 -0.118 16.97750517731 4.9501541210953 -0.265 -0.118 0.0200562383544578 0.319878159029599 -3.25820556558046 -1.09469622564373 Q96KQ4 PPP1R13B Q96KQ4.S671.p_PPP1R13B Q96KQ4_S671s _1_1_671_671 Q96KQ4 Q96KQ4 Apoptosis-stimulating of p53 protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18725.18725.4 17.6 17.6 1.124 5 1 1 0 821.9141 3204.6789 S671s TMT10 648 (K) EPEQDGPAAPADGSTVESLPRPLsPTK (L) EPEQDGPAAPADGS(0.0)T(0.0)VES(0.0)LPRPLS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S PPP1R13B 120133.8 1 8 1161.1 171.12 HUMAN 1 -16.9775 -4.9502 ESLPSTVSANSLYEP-p Q15057;S581-p ESLPSTVSANSLYEP 0.454180425050792 0.0260966993887235 0.17 0.330666666666667 6.32235359652791 21.5285209534964 0.17 0.330666666666667 0.233219382082027 0.00703311801109525 1.34179144977679 4.2106087150847 Q15057 ACAP2 Q15057.S581.p_ACAP2 Q15057_S581s _1_1_581_581 Q15057 Q15057|A0A087X1H5 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21555.21555.5 16.62 14.64 1.116 13 1 1 0 1038.478 5108.3915 S581s TMT10 560 (R) SNDSGIQQSSDDGRESLPSTVsANSLYEPEGERQDSSMFLDSK (H) S(0.0)NDS(0.0)GIQQS(0.0)S(0.0)DDGRES(0.0)LPS(0.0)T(0.0)VS(0.99)ANS(0.0)LY(0.0)EPEGERQDS(0.0)S(0.0)MFLDS(0.0)K K:TMT10,s:Phosphorylated S ACAP2 88997 1 11 629.1 257.13 HUMAN 1 6.3224 21.5285 ESLSREGSPAPLEPE-p Q01167;S398-p ESLSREGSPAPLEPE 0.187880975335976 0.050782885337658 -0.221333333333333 -0.283666666666667 14.2467175237585 17.2876261761273 -0.221333333333333 -0.283666666666667 0.0376121576373744 0.018674001200364 -2.73832977013793 -3.31692057899106 Q01167 FOXK2 Q01167.S398.p_FOXK2 Q01167_S398s _1_1_398_398 Q01167 Q01167|Q01167-2 Forkhead box protein K2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14462.14462.2 17.79 17.79 99 1 1 1 0 1107.0654 2133.1592 S398s TMT10 396 (R) EGsPAPLEPEPGAAQPK (L) EGS(1.0)PAPLEPEPGAAQPK K:TMT10,s:Phosphorylated S FOXK2 69288.9 5 9 689.1 243.19 HUMAN 1 -14.2467 -17.2876 ESLVEELSPASEKKP-p Q9BXK5;S426-p ESLVEELSPASEKKP 0.766784644972732 0.0112042134446865 -0.0446666666666667 0.556 2.20874277315386 27.30925997972 -0.0446666666666667 0.556 0.601347794765358 0.00185812104444944 -0.554548960777645 5.64552754777576 Q9BXK5 BCL2L13 Q9BXK5.S426.p_BCL2L13 Q9BXK5_S426s _1_1_426_426 Q9BXK5 A0A087WX97|Q9BXK5|A0A087WTL4|Q9BXK5-4 Bcl-2-like protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19356.19356.3 17.27 17.27 3.18 3 1 1 0 890.1199 2588.3819 S426s TMT10 413 (K) EINAREESLVEELsPASEK (K) EINAREES(0.0)LVEELS(0.99)PAS(0.0)EK K:TMT10,s:Phosphorylated S BCL2L13 52836.3 6 6 810.1 221.13 HUMAN 1 -2.2087 27.3093 ESNESAESSSNWEKQ-p Q9H4L7-2;S245-p ESNESAESSSNWEKQ 0.787423031793126 0.0761298230152036 0.0533333333333333 0.441666666666667 2.00421881354119 14.8428249031245 0.0533333333333334 0.441666666666667 0.630344718942916 0.0327881950303526 0.509736124176601 2.84719042841049 Q9H4L7 SMARCAD1 Q9H4L7.2.S245.p_SMARCAD1 Q9H4L7-2_S239sS242sS245s_3_3_239_245 Q9H4L7-2 Q9H4L7|Q9H4L7-2 Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16423.16423.3 11.38 11.38 1.142 5 3 3 0 945.0406 2593.2054 S239s S242s S245s TMT10 233 (R) LDHGEEsNEsAEsSSNWEK (Q) LDHGEES(0.99)NES(0.99)AES(0.99)S(0.0)S(0.0)NWEK K:TMT10,s:Phosphorylated S SMARCAD1 118399.2 2 20 250.1 406.83 HUMAN 1 2.0042 14.8428 ESNKKGESPSLESRS-p Q8NDX5-7;S284-p ESNKKGESPSLESRS 0.436059638080243 0.00388507065497343 -0.167333333333333 0.781333333333333 6.63730773828632 35.5876877239453 -0.167333333333333 0.781333333333333 0.216904831624968 0.000276204803784184 -1.39736421384096 8.31309776457096 Q8NDX5 PHC3 Q8NDX5.7.S284.p_PHC3 Q8NDX5-7_S284s _1_1_284_284 Q8NDX5-7 Q8NDX5-7 Isoform 7 of Polyhomeotic-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6060.6060.2 11.34 6.67 1.52 3 1 1 0 814.4258 1547.8793 S284s TMT10 281 (K) KGEsPSLESR (S) KGES(0.99)PS(0.0)LES(0.0)R K:TMT10,s:Phosphorylated S PHC3 108276.8 2 5 439.1 312.22 HUMAN 1 -6.6373 35.5877 ESNPQNRSPESRPSV-p J3QS41;S1318-p ESNPQNRSPESRPSV 0.221440669353428 0.164115274739476 -0.198666666666667 -0.141666666666667 12.6066730166206 10.3195199523027 -0.198666666666667 -0.141666666666667 0.0548697142311537 0.0929069075817174 -2.44042714431993 -2.03642744645301 J3QS41 HELZ J3QS41.S1318.p_HELZ J3QS41_S1318s_1_1_1318_1318 J3QS41 J3QS41|P42694 Probable helicase with zinc finger domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17583.17583.4 11.97 11.97 2.174 7 1 1 0 877.4328 3443.7869 Q1307q S1318s Hydrogen 1307 (K) qVDLESNPQNRsPESRPSVVYPSTKFPR (K) Q(1.0)VDLES(0.0)NPQNRS(0.99)PES(0.0)RPS(0.0)VVY(0.0)PS(0.0)T(0.0)KFPR K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S HELZ 220821.8 7 9 466.1 303.39 HUMAN 1 -12.6067 -10.3195 ESNYFGLSPEERREK-p Q01804;S443-p ESNYFGLSPEERREK 0.872258828483717 0.0955462943752195 -0.0236666666666667 -0.185 1.16143332654254 13.4886776506785 -0.0236666666666667 -0.185 0.765343974441605 0.0447849645656539 -0.313896073043082 -2.5980182057959 Q01804 OTUD4 Q01804.S443.p_OTUD4 Q01804_S443s _1_1_443_443 Q01804 Q01804|Q01804-3|Q01804-5 OTU domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18029.18029.3 17.66 17.66 6.922 3 1 1 0 579.5969 1656.8067 S443s TMT10 436 (R) ESNYFGLsPEER (R) ES(0.0)NY(0.0)FGLS(0.99)PEER s:Phosphorylated S OTUD4 124898 3 1 1668.1 122.34 HUMAN 1 -1.1614 -13.4887 ESPLKSKSQEEPKDT-p Q9NYF8;S183-p ESPLKSKSQEEPKDT 0.772883727112607 0.0611592109714098 -0.0586666666666667 0.222666666666667 2.1390722046371 16.1603964094276 -0.0586666666666667 0.222666666666667 0.611072556089431 0.0242080807341505 -0.539384959676682 3.09683349837081 Q9NYF8 BCLAF1 Q9NYF8.S183.p_BCLAF1 Q9NYF8_S183s _1_1_183_183 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17939.17939.4 17.65 17.65 1.189 4 1 1 0 844.6548 3295.621 S183s TMT10 183 (K) sQEEPKDTFEHDPSESIDEFNK (S) S(0.99)QEEPKDT(0.0)FEHDPS(0.0)ES(0.0)IDEFNK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 7 4 10.1 1293.04 HUMAN 1 -2.1391 16.1604 ESPVLAASPEPWGPS-p Q96JM3;S253-p ESPVLAASPEPWGPS 0.55827821703547 0.0618137900033437 0.0836666666666667 0.214333333333333 4.67476153886294 16.0946508806117 0.0836666666666667 0.214333333333333 0.340819037878127 0.024577341948976 1.04410450920731 3.08419011989203 Q96JM3 CHAMP1 Q96JM3.S253.p_CHAMP1 Q96JM3_S247sS253s_2_2_247_253 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23235.23235.5 13.03 13.03 1.104 10 2 2 0 937.8513 4525.304 S247s S253s TMT10 230 (K) QSHFPETLGPPSASSPEsPVLAAsPEPWGPSPAASPESRK (S) QS(0.0)HFPET(0.0)LGPPS(0.0)AS(0.0)S(0.0)PES(0.99)PVLAAS(0.99)PEPWGPS(0.0)PAAS(0.0)PES(0.0)RK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 6 39 25.1 950.05 HUMAN 2 4.6748 16.0947 ESPVNYGSPPSIADT-p Q8WWQ0;S142-p ESPVNYGSPPSIADT 0.306028128698442 0.655000317937057 0.188 -0.068 9.63774162239566 2.51154342733073 0.188 -0.068 0.108699072343954 0.560848622146363 1.91883664829008 -0.61924764679097 Q8WWQ0 PHIP Q8WWQ0.S142.p_PHIP Q8WWQ0_S142s_1_1_142_142 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25934.25934.4 14.34 14.34 1.303 7 1 1 0 909.449 3553.8059 N139n S142s TMT10 122 (K) GSALAALHCGRPPESPVnYGsPPSIADTLFSR (K) GS(0.0)ALAALHCGRPPES(0.0)PVN(1.0)Y(0.0)GS(0.99)PPS(0.0)IADT(0.0)LFS(0.0)R C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S PHIP 208454.1 2 2 108.1 577.05 HUMAN 1 9.6377 -2.5115 ESQAGSDTDVEEGKA-p Q14676;T378-p ESQAGSDTDVEEGKA 0.159393285726736 0.212823434240992 0.251666666666667 0.176 15.9742011632231 8.84159843615002 0.251666666666667 0.176 0.0252685245401452 0.130569023579038 3.06323820369797 1.78031507045543 Q14676 MDC1 Q14676.T378.p_MDC1 Q14676_S376sT378t_2_2_376_378 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20616.20616.5 20.7 14.91 3.654 3 2 2 0 847.0261 4071.1602 S376s T378t TMT10 360 (R) GPGAPGLAHLQESQAGsDtDVEEGKAPQAVPLEK (S) GPGAPGLAHLQES(0.0)QAGS(0.99)DT(0.99)DVEEGKAPQAVPLEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T MDC1 227803.2 10 60 6.1 1662.62 HUMAN 1 15.9742 8.8416 ESQESQGTPGELPST-p Q5UAW9;T328-p ESQESQGTPGELPST 0.807255487285846 0.446280872986812 0.0423333333333333 -0.0823333333333333 1.79026187615854 4.66852808136898 0.0423333333333333 -0.0823333333333333 0.66217657377105 0.341308568932483 0.46183621991738 -1.04274919086414 Q5UAW9 GPR157 Q5UAW9.T328.p_GPR157 Q5UAW9_T328t _1_1_328_328 Q5UAW9 Q5UAW9 G-protein coupled receptor 157 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13349.13349.3 16.78 16.78 2.598 6 1 1 0 930.7857 2710.3936 T328t TMT10 313 (K) APAPSKPGESQESQGtPGELPST (-) APAPS(0.0)KPGES(0.0)QES(0.0)QGT(0.99)PGELPS(0.0)T(0.0) K:TMT10,t:Phosphorylated T GPR157 37250.1 1 1 5325.1 20.52 HUMAN 1 1.7903 -4.6685 ESQGQDESVDSKKST-p Q9P296;S320-p ESQGQDESVDSKKST 0.473085606789966 0.00537601195102094 -0.287 0.614666666666667 5.98877780212303 32.9536329919958 -0.287 0.614666666666667 0.251838555578563 0.000506566774036615 -1.28256417233127 7.37037695138167 Q9P296 C5AR2 Q9P296.S320.p_C5AR2 Q9P296_S320s _1_1_320_320 Q9P296 Q9P296 C5a anaphylatoxin chemotactic receptor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6822.6822.3 14.04 11.03 3.287 3 1 1 0 735.3742 2124.1388 S320s TMT10 313 (R) ESQGQDEsVDSKK (S) ES(0.0)QGQDES(0.99)VDS(0.0)KK K:TMT10,s:Phosphorylated S C5AR2 36935.5 1 1 4662.1 28.28 HUMAN 1 -5.9888 32.9536 ESQNPLASPTNTLLG-p Q7Z417;S629-p ESQNPLASPTNTLLG 0.125813604638611 0.00298089814036961 -0.286666666666667 -0.734 18.6951365590539 38.0208366780395 -0.286666666666667 -0.734 0.0135047436302794 0.000157730736863188 -3.60433942746686 -9.27582610583334 Q7Z417 NUFIP2 Q7Z417.S629.p_NUFIP2 Q7Z417_S629s _1_1_629_629 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27231.27701.3 22.23 19.17 1.118 6 1 1 0 962.8221 2806.4875 S629s TMT10 618 (K) DYEIESQNPLAsPTNTLLGSAK (E) DY(0.0)EIES(0.0)QNPLAS(0.99)PT(0.0)NT(0.0)LLGS(0.0)AK K:TMT10,s:Phosphorylated S NUFIP2 76176.8 10 17 304.1 375.48 HUMAN 1 -18.6951 -38.0208 ESRAEELSPAALSPL-p A5YM69;S445-p ESRAEELSPAALSPL 0.803635725185448 0.757064906312955 -0.0486666666666667 0.0553333333333334 1.82921015078409 1.67125002747383 -0.0486666666666667 0.0553333333333333 0.656264609968559 0.680573441411737 -0.470638178083191 0.4346535925434 A5YM69 ARHGEF35 A5YM69.S445.p_ARHGEF35 A5YM69_S445s _1_1_445_445 A5YM69 A5YM69 Rho guanine nucleotide exchange factor 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32865.32865.3 15.87 15.87 3.935 2 1 1 0 705.7161 2035.1637 S445s TMT10 441 (R) AEELsPAALSPLLEPIR (C) AEELS(0.99)PAALS(0.0)PLLEPIR s:Phosphorylated S ARHGEF35 53685.2 4 3 487.2 295.28 HUMAN 1 -1.8292 1.6713 ESRAEELSPAALSPS-p Q12774;S445-p ESRAEELSPAALSPS 0.846380611827259 0.0136706666678471 -0.059 -0.398 1.4017997588846 25.9009591283457 -0.059 -0.398 0.724135808912295 0.00256982818006015 -0.371835807164997 -5.26875412683034 Q12774 ARHGEF5 Q12774.S445.p_ARHGEF5 Q12774_S445sS450s_2_2_445_450 Q12774 Q12774 Rho guanine nucleotide exchange factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26784.26784.3 14.34 14.34 2.603 3 2 2 0 723.6858 2009.1116 S445s S450s TMT10 441 (R) AEELsPAALsPSLEPIR (C) AEELS(0.99)PAALS(0.99)PS(0.0)LEPIR s:Phosphorylated S ARHGEF5 177994.4 1 21 487.1 295.28 HUMAN 1 -1.4018 -25.901 ESRAPDMSPQRISNQ-p Q8NC74;S210-p ESRAPDMSPQRISNQ 0.440361201395823 0.0303929129094301 0.117666666666667 0.289666666666667 6.56218709289712 20.5131704322829 0.117666666666667 0.289666666666667 0.220689306894965 0.00888552221019379 1.38413702154173 3.98610534140382 Q8NC74 RBBP8NL Q8NC74.S210.p_RBBP8NL Q8NC74_S210s _1_1_210_210 Q8NC74 Q8NC74 RBBP8 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14560.14560.3 14.26 12.13 3.106 4 1 1 0 773.7169 2239.1702 S210s TMT10 195 (K) ISPGATLPESRAPDMsPQR (I) IS(0.0)PGAT(0.0)LPES(0.0)RAPDMS(0.99)PQR s:Phosphorylated S RBBP8NL 71886.7 6 6 565.1 270.89 HUMAN 1 6.5622 20.5132 ESREERLSPRETRER-p A0A0G2JHC2;S145-p ESREERLSPRETRER 0.834327857608735 0.537037118330437 0.0343333333333333 -0.0696666666666666 1.51679102199826 3.63332804364598 0.0343333333333333 -0.0696666666666666 0.70521395520998 0.433178801759562 0.398918052551736 -0.846223277747764 A0A0G2JHC2 NotFound A0A0G2JHC2.S145.p_NotFound A0A0G2JHC2_S145s _1_1_145_145 A0A0G2JHC2 Q6NYC8|A0A0G2JHC2|Q6NYC8-2 PPP1R18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5016.5016.3 10.79 4.54 99 1 1 1 0 399.2062 1115.637 S145s TMT10 141 (R) EERLsPR (E) EERLS(1.0)PR s:Phosphorylated S PPP1R18 68325.8 3 4 1213.1 166.15 HUMAN 1 1.5168 -3.6333 ESRFSSATWPRATKS-p A0A286YES6;T258-p ESRFSSATWPRATKS 0.40265827933693 0.730716479708819 0.133666666666667 -0.05 7.29397139560335 1.877923803113 0.133666666666667 -0.05 0.186467376445601 0.648944595155279 1.51237955523323 -0.481539721053804 A0A286YES6 NotFound A0A286YES6.T258.p_NotFound A0A286YES6_T258t _1_1_258_258 A0A286YES6 A0A286YES6|O94854|O94854-2 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17056.17056.2 8.77 7.44 1.357 3 1 1 0 630.8027 1180.6312 T258t TMT10 254 (R) FSSAtWPR (A) FS(0.0)S(0.0)AT(0.99)WPR t:Phosphorylated T MACF1 151593.8 2 2 2797.1 70.2 HUMAN 1 7.294 -1.8779 ESRKLLSSPGKNISC-p Q2Y0W8;S1050-p ESRKLLSSPGKNISC 0.129751256844141 0.00500586186431726 0.311333333333333 -0.735666666666667 18.3528604791327 33.5471616772451 0.311333333333333 -0.735666666666667 0.0146121442904725 0.000441859129144655 3.53403275393064 -7.5743779513742 Q2Y0W8 SLC4A8 Q2Y0W8.S1050.p_SLC4A8 Q2Y0W8_S1050s _1_1_1050_1050 Q2Y0W8 Q2Y0W8|Q2Y0W8-5 Electroneutral sodium bicarbonate exchanger 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12893.12893.3 7.25 7.25 1.39 2 1 1 0 532.9963 1517.003 S1050s TMT10 1046 (R) KLLSsPGK (N) KLLS(0.0)S(0.99)PGK K:TMT10,s:Phosphorylated S SLC4A8 124418.9 2 3 3282.1 55.15 HUMAN 1 18.3529 -33.5472 ESRKRKLSGDQPAAR-p E7ETY2;S1350-p ESRKRKLSGDQPAAR 0.228095422318106 0.00728014187179222 0.205 -0.571333333333333 12.3343359508044 30.5799866580723 0.205 -0.571333333333333 0.0584206527181712 0.000874986463262555 2.39178073238917 -6.59981680946814 E7ETY2 TCOF1 E7ETY2.S1350.p_TCOF1 E7ETY2_S1350s _1_1_1350_1350 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6086.6086.2 13.22 8.68 99 1 1 1 0 790.9315 1500.8898 S1350s TMT10 1348 (R) KLsGDQPAAR (T) KLS(1.0)GDQPAAR K:TMT10,s:Phosphorylated S TCOF1 152529.5 18 32 19.1 1034.65 HUMAN 1 12.3343 -30.58 ESRMRIESLSSQLSN-p P20700;S302-p ESRMRIESLSSQLSN 0.964902156960383 0.148526406412028 -0.007 0.152666666666667 0.300525162058948 10.9033665874401 -0.00700000000000001 0.152666666666667 0.933141455679458 0.0812200665967807 -0.0878684431529449 2.13823418389349 P20700 LMNB1 P20700.S302.p_LMNB1 P20700_S302s _1_1_302_302 P20700 P20700|E9PBF6|A0A0D9SFE5 Lamin-B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20842.20842.2 7.95 7.95 1.304 4 1 1 0 878.46 1675.9428 S302s Hydrogen 300 (R) IEsLSSQLSNLQK (E) IES(0.99)LS(0.0)S(0.0)QLS(0.0)NLQK K:TMT10-Lys-Only,s:Phosphorylated S LMNB1 66692.5 4 8 440.1 312.01 HUMAN 1 -0.3005 10.9034 ESRQGRGSAGEEEES-p O15068-9;S590-p ESRQGRGSAGEEEES 0.0926681628012438 0.100695207241147 -0.482 -0.311666666666667 21.9869139521618 13.1721792174593 -0.482 -0.311666666666667 0.00632861395840596 0.0481706024901986 -4.31893749525113 -2.54072335407793 O15068 MCF2L O15068.9.S590.p_MCF2L O15068-9_S590s _1_1_590_590 O15068-9 O15068|O15068-9|O15068-10|O15068-8|O15068-6 Isoform 7 of Guanine nucleotide exchange factor DBS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15596.15596.3 14.26 14.26 4.37 2 1 1 0 704.3497 2031.0668 S590s TMT10 586 (R) QGRGsAGEEEESLAILR (R) QGRGS(0.99)AGEEEES(0.0)LAILR s:Phosphorylated S MCF2L 127771.1 1 5 2436.1 83.49 HUMAN 1 -21.9869 -13.1722 ESRRHLFTPADKRIP-p Q9Y2L1;T374-p ESRRHLFTPADKRIP 0.630394839719445 0.0192104793400816 -0.0983333333333333 0.343 3.72843421374039 23.588922468589 -0.0983333333333333 0.343 0.423795731961857 0.0043763067257528 -0.864850079060301 4.68961734367024 Q9Y2L1 DIS3 Q9Y2L1.T374.p_DIS3 Q9Y2L1_T374t _1_1_374_374 Q9Y2L1 Q9Y2L1|Q9Y2L1-2|G3V1J5|F2Z2C0 Exosome complex exonuclease RRP44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14395.14395.3 9.67 9.67 99 1 1 1 0 489.5981 1386.8146 T374t TMT10 371 (R) HLFtPADK (R) HLFT(1.0)PADK K:TMT10,t:Phosphorylated T DIS3 110084.8 1 2 3526.1 49.02 HUMAN 1 -3.7284 23.5889 ESRSPQRSPLQSAES-p Q8IWB9;S794-p ESRSPQRSPLQSAES 0.706490382456724 0.000652542752844291 -0.1975 14.876 2.83685859125058 75.6612672666804 -0.1975 14.876 0.520372264475136 2.71564673038533e-08 -0.697754444881768 85.7049317374106 Q8IWB9 TEX2 Q8IWB9.S794.p_TEX2 Q8IWB9_S794s _1_1_794_794 Q8IWB9 Q8IWB9-2|A0A087WVA8 Testis-expressed protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8578.8578.3 15.71 15.71 1.277 6 1 1 0 789.4091 2286.2454 S794s TMT10 790 (R) SPQRsPLQSAESSPTAGK (K) S(0.0)PQRS(0.99)PLQS(0.0)AES(0.0)S(0.0)PT(0.0)AGK K:TMT10,s:Phosphorylated S TEX2 125928 1 17 300.1 376.78 HUMAN 1 -2.8369 75.6613 ESRVGSGSLDNLGRF-p Q13136;S668-p ESRVGSGSLDNLGRF 0.25414491835742 0.282474312073195 0.186666666666667 -0.227 11.3273709602952 7.23903042298356 0.186666666666667 -0.227 0.0736652901834987 0.188841289655991 2.21356448463538 -1.50236338869686 Q13136 PPFIA1 Q13136.S668.p_PPFIA1 Q13136_S666sS668s_2_2_666_668 Q13136 Q13136|Q13136-2 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16555.16555.2 7.9 7.9 99 2 2 2 0 732.3284 1303.7167 S666s S668s TMT10 664 (R) VGsGsLDNLGR (F) VGS(1.0)GS(1.0)LDNLGR s:Phosphorylated S PPFIA1 136347 1 38 248.1 410.18 HUMAN 1 11.3274 -7.239 ESSEENLSSEDEELP-p P38398;S1217-p ESSEENLSSEDEELP 0.8930597643092 0.00695221592447754 0.021 -0.560333333333333 0.961743553356484 30.9358899329999 0.021 -0.560333333333334 0.801356279898742 0.000806140994332204 0.264254477995024 -6.71092516440596 P38398 BRCA1 P38398.S1217.p_BRCA1 P38398_S1217sS1218s_2_2_1217_1218 P38398 P38398-7|P38398-4|P38398-8|Q5YLB2 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31676.32290.4 17.64 17.64 7.069 4 2 2 0 978.9707 3752.9296 S1217s S1218s TMT10 1208 (K) KLESSEENLssEDEELPCFQHLLFGK (V) KLES(0.0)S(0.0)EENLS(0.99)S(0.99)EDEELPCFQHLLFGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BRCA1 210227.6 8 26 106.1 588.91 HUMAN 1 0.9617 -30.9359 ESSEPTGSPAPVIQH-p P17544-6;S423-p ESSEPTGSPAPVIQH 0.388478322474988 0.0699911058958282 -0.121666666666667 0.208666666666667 7.5973195700384 15.3560599155802 -0.121666666666667 0.208666666666667 0.173887371623812 0.0291335902938147 -1.56521773828454 2.94352414352631 P17544 ATF7 P17544.6.S423.p_ATF7 P17544-6_S423s _1_1_423_423 P17544-6 P17544|P17544-6|P17544-3|P17544-2|P17544-4 Isoform 6 of Cyclic AMP-dependent transcription factor ATF-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13401.13401.3 23.17 23.17 1.198 9 1 1 0 1024.8316 2992.5173 S423s TMT10 416 (K) ESSEPTGsPAPVIQHSSATAPSNGLSVR (S) ES(0.0)S(0.0)EPT(0.0)GS(0.99)PAPVIQHS(0.0)S(0.0)AT(0.0)APS(0.0)NGLS(0.0)VR s:Phosphorylated S ATF7 52155.3 2 8 758.1 230.62 HUMAN 1 -7.5973 15.3561 ESSGEEDSDLSPEER-p P41236;S127-p ESSGEEDSDLSPEER 0.967385376512077 0.00622694524217709 -0.0113333333333333 0.603666666666667 0.279836158016548 31.7839036484113 -0.0113333333333333 0.603666666666667 0.937597378067547 0.000663146734143376 -0.0819961524961007 6.98184268525684 P41236 PPP1R2 P41236.S127.p_PPP1R2 P41236_S121sS122sS127s_3_3_121_127 P41236 P41236|Q6NXS1|G1AUC5 Protein phosphatase inhibitor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8786.9407.3 10.71 10.71 3.905 4 3 3 0 964.0428 2650.2165 S121s S122s S127s Hydrogen 116 (R) IQEQEssGEEDsDLSPEEREK (K) IQEQES(0.99)S(0.99)GEEDS(0.99)DLS(0.0)PEEREK K:TMT10-Lys-Only,s:Phosphorylated S PPP1R2 23071.9 6 8 717.1 237.75 HUMAN 1 -0.2798 31.7839 ESSGGAPSPQRQADR-p H0YAY5;S212-p ESSGGAPSPQRQADR 0.363920347814779 0.0535552282032114 0.250333333333333 -0.543333333333333 8.14704863527173 16.9466184320779 0.250333333333333 -0.543333333333333 0.153212830689228 0.0201993854594742 1.66066039970745 -3.24966173090831 H0YAY5 NotFound H0YAY5.S212.p_NotFound H0YAY5_S212s _1_1_212_212 H0YAY5 H0YAY5 Endonuclease V HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5051.5051.4 17.94 12.34 8.394 4 1 1 0 734.3631 2854.463 S212s TMT10 192 (K) AQRPVACPKGDSGESSGGAPsPQR (Q) AQRPVACPKGDS(0.0)GES(0.0)S(0.0)GGAPS(0.99)PQR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ENDOV 25954.4 4 1 2332.2 87.5 HUMAN 1 8.147 -16.9466 ESSGVENSPAGARPK-p Q8WVM8;S303-p ESSGVENSPAGARPK 0.712174965944561 0.0199448153738491 -0.0513333333333333 -0.375333333333333 2.77372504664635 23.3093759344041 -0.0513333333333334 -0.375333333333333 0.527992186095355 0.00466726442411892 -0.674066257034053 -4.62267919432887 Q8WVM8 SCFD1 Q8WVM8.S303.p_SCFD1 Q8WVM8_S303s _1_1_303_303 Q8WVM8 Q8WVM8|Q8WVM8-3|Q8WVM8-2 Sec1 family domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11979.11979.2 18.51 18.51 3.37 3 1 1 0 1240.1328 2399.2931 S303s TMT10 292 (R) VNLEESSGVENsPAGARPK (R) VNLEES(0.0)S(0.0)GVENS(0.99)PAGARPK K:TMT10,s:Phosphorylated S SCFD1 72720.9 18 1 3082.1 61.22 HUMAN 1 -2.7737 -23.3094 ESSIMGNSIDTVRYG-p Q8IW35-2;S762-p ESSIMGNSIDTVRYG 0.275294038676077 0.552700368180615 0.255333333333333 0.0856666666666667 10.6029381899143 3.46758799350844 0.255333333333333 0.0856666666666667 0.0870374544715726 0.450029725267328 2.08668435651228 0.813759895722976 Q8IW35 CEP97 Q8IW35.2.S762.p_CEP97 Q8IW35-2_S762s _1_1_762_762 Q8IW35-2 Q8IW35-2|E9PG22 Isoform 2 of Centrosomal protein of 97 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14659.14659.3 16.49 16.49 1.258 8 1 1 0 756.0065 2186.0444 S762s TMT10 749 (K) SSTEGSESSIMGNsIDTVR (Y) S(0.0)S(0.0)T(0.0)EGS(0.0)ES(0.0)S(0.0)IMGNS(0.99)IDT(0.0)VR s:Phosphorylated S CEP97 100762.5 1 9 759.1 230.22 HUMAN 1 10.6029 3.4676 ESSKELESPLTPGKV-p O15014;S743-p ESSKELESPLTPGKV 0.401154116374902 0.0706948223821983 -0.136333333333333 -0.243666666666667 7.32312214258328 15.2957112266839 -0.136333333333333 -0.243666666666667 0.185219959857519 0.0295412506363 -1.51746387159952 -2.93213846716738 O15014 ZNF609 O15014.S743.p_ZNF609 O15014_S743s _1_1_743_743 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16119.16119.2 11.99 11.99 2.646 2 1 1 0 804.937 1528.8987 S743s TMT10 740 (K) ELEsPLTPGK (V) ELES(0.99)PLT(0.0)PGK K:TMT10,s:Phosphorylated S ZNF609 152443.5 2 17 63.1 699.07 HUMAN 1 -7.3231 -15.2957 ESSKELGSGGNIKPW-p Q9HCD6-2;S207-p ESSKELGSGGNIKPW 0.385371090589596 0.541353814198474 -0.133666666666667 -0.0806666666666667 7.66583584815039 3.58535896128801 -0.133666666666667 -0.0806666666666667 0.171165571777353 0.437989908104063 -1.57713260038794 -0.836860323490959 Q9HCD6 TANC2 Q9HCD6.2.S207.p_TANC2 Q9HCD6-2_S207s _1_1_207_207 Q9HCD6-2 Q9HCD6-2|Q9HCD6-4|Q9HCD6-3 Isoform 2 of Protein TANC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17099.17099.3 12.12 9.16 8.005 2 1 1 0 799.4358 2316.3279 S207s TMT10 204 (K) ELGsGGNIKPWQSQK (S) ELGS(0.99)GGNIKPWQS(0.0)QK K:TMT10,s:Phosphorylated S TANC2 222282.4 1 3 348.1 351.89 HUMAN 1 -7.6658 -3.5854 ESSLKDASFEKEATE-p Q96PC5;S724-p ESSLKDASFEKEATE 0.769192567611738 0.00509455060478819 -0.068 -0.571666666666667 2.18542923826807 33.3795969361164 -0.0680000000000001 -0.571666666666667 0.604584593811642 0.000459240632471975 -0.549486043870066 -7.51630508681657 Q96PC5 MIA2 Q96PC5.S724.p_MIA2 Q96PC5_S724s _1_1_724_724 Q96PC5 Q96PC5|G3V599|O15320-5|O15320-10|O15320-3 Melanoma inhibitory activity protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20953.20953.4 18.14 18.14 2.703 5 1 1 0 720.1077 2797.4387 S724s TMT10 710 (K) EYEGYEVESSLKDAsFEK (E) EY(0.0)EGY(0.0)EVES(0.0)S(0.0)LKDAS(0.99)FEK K:TMT10,s:Phosphorylated S MIA2 160460.4 1 1 569.1 269.96 HUMAN 1 -2.1854 -33.3796 ESSNLFGSPEEATPS-p Q9H910-3;S58-p ESSNLFGSPEEATPS 0.107434975252728 0.0389855335108308 -0.298333333333333 -0.281666666666667 20.4038375961394 18.9198528398779 -0.298333333333333 -0.281666666666667 0.0091120530681058 0.0128237403499774 -3.96615927826882 -3.64769728218361 Q9H910 HN1L Q9H910.3.S58.p_HN1L Q9H910-3_S58s _1_1_58_58 Q9H910-3 Q9H910-3|A6NGP5|B4E1P3|H3BMM8 Isoform 3 of Jupiter microtubule associated homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15280.15280.5 21.57 18.09 4.647 6 1 1 0 668.53 3258.6577 S58s TMT10 44 (R) AMKPPGGESSNLFGsPEEATPSSRPNR (M) AMKPPGGES(0.0)S(0.0)NLFGS(0.99)PEEAT(0.0)PS(0.0)S(0.0)RPNR K:TMT10,s:Phosphorylated S JPT2 23082.3 5 2 1318.1 154.67 HUMAN 1 -20.4038 -18.9199 ESSSANVSPFAPGVS-p Q9P2D3;S1123-p ESSSANVSPFAPGVS 0.360609439778779 0.00620126302286299 0.264666666666667 -0.624 8.23622555329982 31.8069469585097 0.264666666666667 -0.624 0.150098877584351 0.000659637450016138 1.67611648262963 -6.98932828530188 Q9P2D3 HEATR5B Q9P2D3.S1123.p_HEATR5B Q9P2D3_S1123s _1_1_1123_1123 Q9P2D3 Q9P2D3|Q9P2D3-3 HEAT repeat-containing protein 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11951.11951.3 17.29 13.83 3.496 7 1 1 0 911.4493 2652.3629 S1123s TMT10 1111 (K) NTGDKESSSANVsPFAPGVSSR (T) NT(0.0)GDKES(0.0)S(0.0)S(0.0)ANVS(0.99)PFAPGVS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S HEATR5B 226980 1 1 4571.1 29.62 HUMAN 1 8.2362 -31.8069 ESSTSGFTPGGGGSS-p P49321-3;T685-p ESSTSGFTPGGGGSS 0.274967823784668 0.655353797565744 0.490666666666667 -0.0476666666666666 10.6132348601406 2.50835609876277 0.490666666666667 -0.0476666666666666 0.0868313421563685 0.561260385372069 2.08848142646869 -0.618574953055782 P49321 NASP P49321.3.T685.p_NASP P49321-3_T685t _1_1_685_685 P49321-3 P49321-3 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23156.23156.3 25.42 25.42 2.476 10 1 1 0 918.1072 2672.3399 T685t TMT10 674 (K) ATLVESSTSGFtPGGGGSSVSMIASR (K) AT(0.0)LVES(0.0)S(0.0)T(0.0)S(0.0)GFT(0.99)PGGGGS(0.0)S(0.0)VS(0.0)MIAS(0.0)R t:Phosphorylated T NASP 86552 1 23 87.1 626.46 HUMAN 1 10.6132 -2.5084 ESTASLDSIVRDEGI-p Q9NYQ6;S2764-p ESTASLDSIVRDEGI 0.56125599376124 0.0944658600620255 0.078 0.185333333333333 4.61778221511716 13.5515841050541 0.078 0.185333333333333 0.345320036774039 0.0441409412283666 1.03352463909169 2.60944573780108 Q9NYQ6 CELSR1 Q9NYQ6.S2764.p_CELSR1 Q9NYQ6_T2743tS2764s_2_2_2743_2764 Q9NYQ6 Q9NYQ6 Cadherin EGF LAG seven-pass G-type receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30276.30276.5 14.31 14.31 1.131 8 2 2 0 927.0355 4471.2121 T2743t S2764s TMT10 2737 (R) SLNCNTtFGDGPDMLRTDLGESTASLDsIVRDEGIQK (L) S(0.0)LNCNT(0.0)T(0.99)FGDGPDMLRT(0.0)DLGES(0.0)T(0.0)AS(0.0)LDS(0.99)IVRDEGIQK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S CELSR1 334558.1 6 10 1317.1 154.7 HUMAN 1 4.6178 13.5516 ESTELNMTFHLFIVA-p P51674;T210-p ESTELNMTFHLFIVA 0.373228695696441 0.184537258531495 0.305 0.213666666666667 7.93402560031795 9.64663176439909 0.305 0.213666666666667 0.16091533731851 0.108476789577484 1.6237136869761 1.91963269834873 P51674 GPM6A P51674.T210.p_GPM6A P51674_S204sT205tT210t_3_3_204_210 P51674 P51674|P51674-2|P51674-3 Neuronal membrane glycoprotein M6-a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31779.31809.5 7.54 4.75 1.368 6 3 3 0 1043.4835 4972.5298 S204s T205t T210t N238n Hydrogen 201 (R) MCEstELNMtFHLFIVALAGAGAAVIAMVHYLMVLSAnWAYVK (D) MCES(0.99)T(0.99)ELN(0.0)MT(0.99)FHLFIVALAGAGAAVIAMVHY(0.0)LMVLS(0.0)AN(0.99)WAY(0.0)VK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated GPM6A 31950.7 1 1 7135.1 7.54 HUMAN 1 7.934 9.6466 ESTGNMVTGQTVCKN-p Q15021;T591-p ESTGNMVTGQTVCKN 0.827997063487557 0.440897459608939 0.0526666666666667 0.117333333333333 1.57495756749334 4.73708033162548 0.0526666666666667 0.117333333333333 0.695831753253774 0.335963399305193 0.412471058549979 1.05544483536691 Q15021 NCAPD2 Q15021.T591.p_NCAPD2 Q15021_S585sT586tT591t_3_3_585_591 Q15021 Q15021 Condensin complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7137.7137.4 8.55 1.68 1.246 6 3 3 0 1048.9713 3950.9726 S585s T586t T591t N598n N601n TMT10 581 (K) NPREstGNMVtGQTVCKnKPnMSDPEESR (G) N(0.0)PRES(0.99)T(0.99)GN(0.0)MVT(0.99)GQT(0.0)VCKN(0.99)KPN(0.99)MS(0.0)DPEES(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated NCAPD2 158605.7 1 11 1192.1 168.06 HUMAN 1 1.575 4.7371 ESTRTRESPLDTTNF-p Q9UNA4;S502-p ESTRTRESPLDTTNF 0.116602871314905 0.00256784259391638 0.387666666666667 0.822 19.4306688797025 39.5664676024565 0.387666666666667 0.822 0.011400741852359 0.000110497700366621 3.75781707770973 9.93806124858846 Q9UNA4 POLI Q9UNA4.S502.p_POLI Q9UNA4_S502s _1_1_502_502 Q9UNA4 Q9UNA4|J3KQ09|J3KSW2 DNA polymerase iota HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12936.12936.3 13.05 8.32 1.143 5 1 1 0 678.6817 1954.0646 S502s TMT10 499 (R) TREsPLDTTNFSK (E) T(0.0)RES(0.99)PLDT(0.0)T(0.0)NFS(0.0)K K:TMT10,s:Phosphorylated S POLI 83803.3 1 2 4111.1 37.39 HUMAN 1 19.4307 39.5665 ESTRVSASLPRSYRK-p Q8WWI1-3;S561-p ESTRVSASLPRSYRK 0.216110872870992 0.82706733989305 -0.193 -0.0256666666666667 12.8238766503657 1.15435608199482 -0.193 -0.0256666666666667 0.0521930089641439 0.766592192521454 -2.47937834808058 -0.312129693322165 Q8WWI1 LMO7 Q8WWI1.3.S561.p_LMO7 Q8WWI1-3_S561s _1_1_561_561 Q8WWI1-3 Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11387.11387.2 7.9 4.28 2.299 2 1 1 0 519.7815 958.5883 S561s TMT10 558 (R) VSAsLPR (S) VS(0.0)AS(0.99)LPR s:Phosphorylated S LMO7 154694.3 2 13 61.1 704.74 HUMAN 1 -12.8239 -1.1544 ESTSLGDSDEEDTMS-p O14641;S211-p ESTSLGDSDEEDTMS 0.48848292416817 0.460141674727555 0.108 0.0906666666666667 5.73100197444877 4.49523627386661 0.108 0.0906666666666667 0.267238978208836 0.355202793479604 1.23649182126581 1.01050041728844 O14641 DVL2 O14641.S211.p_DVL2 O14641_S211s _1_1_211_211 O14641 O14641|I3L2N2 Segment polarity protein dishevelled homolog DVL-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21869.21869.4 9.71 9.71 1.191 13 1 1 0 944.4108 3694.6421 S211s TMT10 188 (R) HLAGYESSSTLMTSELESTSLGDsDEEDTMSR (F) HLAGY(0.0)ES(0.0)S(0.0)S(0.0)T(0.0)LMT(0.0)S(0.0)ELES(0.0)T(0.0)S(0.0)LGDS(0.99)DEEDT(0.0)MS(0.0)R s:Phosphorylated S DVL2 79231.8 2 1 3917.1 40.77 HUMAN 1 5.731 4.4952 ESTTVGTSV______-p Q15046-2;S624-p ESTTVGTSV______ 0.422807784151987 0.258174151613319 0.134666666666667 0.200666666666667 6.88647569140258 7.74752831235403 0.134666666666667 0.200666666666667 0.204810600474081 0.167975974294503 1.44112638394385 1.59084302599328 Q15046 KARS Q15046.2.S624.p_KARS Q15046-2_S624s _1_1_624_624 Q15046-2 Q15046-2 Isoform Mitochondrial of Lysine--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19800.19800.2 18.38 18.38 1.719 8 1 1 0 1067.504 2054.0338 S624s TMT10 608 (K) ENVATTDTLESTTVGTsV (-) ENVAT(0.0)T(0.0)DT(0.0)LES(0.0)T(0.0)T(0.0)VGT(0.0)S(0.99)V s:Phosphorylated S KARS 71952.2 3 2 2750.1 71.85 HUMAN 1 6.8865 7.7475 ESVAAALSPLGIEVD-p Q13501;S249-p ESVAAALSPLGIEVD 0.727009788163905 0.433012439162018 -0.0493333333333333 -0.0976666666666667 2.62507864636267 4.8430713451707 -0.0493333333333334 -0.0976666666666667 0.546376655460564 0.327863345046142 -0.643175618424366 -1.07500855966207 Q13501 SQSTM1 Q13501.S249.p_SQSTM1 Q13501_S249s _1_1_249_249 Q13501 Q13501|E7EMC7|Q13501-2 Sequestosome-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32440.32440.4 19.28 19.28 11.823 2 1 1 0 779.4025 3034.6461 S249s TMT10 239 (K) NVGESVAAALsPLGIEVDIDVEHGGK (R) NVGES(0.0)VAAALS(0.99)PLGIEVDIDVEHGGK K:TMT10,s:Phosphorylated S SQSTM1 48485.1 1 7 541.1 276.49 HUMAN 1 -2.6251 -4.8431 ESVEGFLSPSRCGSR-p Q08AD1;S1319-p ESVEGFLSPSRCGSR 0.673294091647579 0.0372582401182819 -0.0573333333333333 -0.311 3.21905026287524 19.2050640094017 -0.0573333333333333 -0.311 0.476535186534812 0.0120086337370792 -0.764563296619597 -3.70709297184084 Q08AD1 CAMSAP2 Q08AD1.S1319.p_CAMSAP2 Q08AD1_S1319s _1_1_1319_1319 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18254.18254.3 12.23 12.23 1.721 4 1 1 0 535.2574 1523.7903 S1319s TMT10 1311 (R) SESVEGFLsPSR (C) S(0.0)ES(0.0)VEGFLS(0.99)PS(0.0)R s:Phosphorylated S CAMSAP2 169284 2 25 28.2 931.95 HUMAN 1 -3.2191 -19.2051 ESVIQSNTPTPPPSQ-p B5MBZ0;T908-p ESVIQSNTPTPPPSQ 0.13430679397205 0.45584709342569 0.263 -0.072 17.8865792112755 4.54909137757334 0.263 -0.072 0.0162682964916081 0.350825265251208 3.43934741314636 -1.02054712727646 B5MBZ0 EML4 B5MBZ0.T908.p_EML4 B5MBZ0_T908tT910t_2_2_908_910 B5MBZ0 B5MBZ0|Q9HC35|Q9HC35-2 Echinoderm microtubule-associated protein-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19124.19124.3 26.04 21.61 1.149 10 2 2 0 1256.9081 3608.7765 T908t T910t TMT10 895 (K) APVSSTESVIQSNtPtPPPSQPLNETAEEESR (I) APVS(0.0)S(0.0)T(0.0)ES(0.0)VIQS(0.0)NT(0.99)PT(0.99)PPPS(0.0)QPLNET(0.0)AEEES(0.0)R t:Phosphorylated T EML4 111259.7 3 15 586.1 265.11 HUMAN 1 17.8866 -4.5491 ESVKEKFSFEPKIRS-p P23443-2;S404-p ESVKEKFSFEPKIRS 0.00550926337302713 0.000952253650599092 -2.02066666666667 -1.79533333333333 61.8265901843811 61.3885649937633 -2.02066666666667 -1.79533333333333 6.56660633872553e-07 7.26345918748123e-07 -26.19206045506 -25.6017577749447 P23443 RPS6KB1 P23443.2.S404.p_RPS6KB1 P23443-2_S404s _1_1_404_404 P23443-2 P23443|P23443-2|P23443-5|P23443-3|P23443-4 Isoform Alpha II of Ribosomal protein S6 kinase beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17274.17274.2 9.96 4.25 99 1 1 1 0 889.9874 1699.0034 S404s TMT10 401 (K) EKFsFEPK (I) EKFS(1.0)FEPK K:TMT10,s:Phosphorylated S RPS6KB1 56530.6 3 5 1663.1 122.57 HUMAN 1 -61.8266 -61.3886 ESVKSTVSETFMSKP-p O75044;S427-p ESVKSTVSETFMSKP 0.206669838771857 0.405338172332972 -0.403333333333333 0.140333333333333 13.2393279104788 5.2201049278159 -0.403333333333333 0.140333333333333 0.047431538194061 0.300600367513153 -2.55428330476304 1.14400484713028 O75044 SRGAP2 O75044.S427.p_SRGAP2 O75044_S427s _1_1_427_427 O75044 O75044|B7ZM87|A0A075B7B5|A0A286YEY3|P0DJJ0|P0DMP2|E9PDX4|A0A087WW56|A0A087X0L1 SLIT-ROBO Rho GTPase-activating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20493.20493.3 17.72 13.87 2.188 6 1 1 0 794.0988 2300.3139 S427s TMT10 424 (K) STVsETFMSKPSIAK (R) S(0.0)T(0.0)VS(0.99)ET(0.0)FMS(0.0)KPS(0.0)IAK K:TMT10,s:Phosphorylated S SRGAP2 122066.6 9 3 489.1 294.64 HUMAN 1 -13.2393 5.2201 ESVNPILSPNQFLKD-p Q8IZT6;S392-p ESVNPILSPNQFLKD 0.157126434170749 0.00485409508519783 -0.285333333333333 -0.675666666666667 16.1230893451681 33.7991772513616 -0.285333333333333 -0.675666666666667 0.0244169304128606 0.000416948364719644 -3.09186052960035 -7.66243855408512 Q8IZT6 ASPM Q8IZT6.S392.p_ASPM Q8IZT6_S392s _1_1_392_392 Q8IZT6 Q8IZT6|Q8IZT6-2 Abnormal spindle-like microcephaly-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32656.32656.3 21.2 21.2 1.246 4 1 1 0 1124.8993 3292.7102 S392s TMT10 374 (K) DNYGLNQDLESESVNPILsPNQFLK (D) DNY(0.0)GLNQDLES(0.0)ES(0.0)VNPILS(0.99)PNQFLK K:TMT10,s:Phosphorylated S ASPM 413444.1 3 4 949.1 196.42 HUMAN 1 -16.1231 -33.7992 ESWLLPGSNDLLLEV-p O15067;S83-p ESWLLPGSNDLLLEV 0.672278586082732 0.845242232436198 0.0576666666666667 0.0216666666666667 3.22945023402666 1.02692950984363 0.0576666666666667 0.0216666666666667 0.475395401626579 0.789418044043995 0.76664307836928 0.280592098629509 O15067 PFAS O15067.S83.p_PFAS O15067_S83s _1_1_83_83 O15067 O15067|J3QSG0 Phosphoribosylformylglycinamidine synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.35862.35862.3 13.02 13.02 13.023 2 1 1 0 768.733 2224.2175 S83s TMT10 76 (R) ESWLLPGsNDLLLEVGPR (L) ES(0.0)WLLPGS(0.99)NDLLLEVGPR s:Phosphorylated S PFAS 146386.3 1 1 3705.1 44.9 HUMAN 1 3.2295 1.0269 ESYELDKSFRLTRFT-p P49903;S17-p ESYELDKSFRLTRFT 0.18516399568195 0.0241846702089274 0.711666666666667 -0.713333333333333 14.406792894535 22.0271770853833 0.711666666666667 -0.713333333333333 0.0362510600380198 0.0062702129615517 2.767917293129 -4.32356745808866 P49903 SEPHS1 P49903.S17.p_SEPHS1 P49903_S17s _1_1_17_17 P49903 P49903|P49903-4|P49903-2 Selenide, water dikinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20809.20809.3 16.74 16.74 2.959 4 1 1 0 796.051 2306.1705 S17s TMT10 5 (R) ESFNPESYELDKsFR (L) ES(0.0)FNPES(0.0)Y(0.0)ELDKS(0.99)FR K:TMT10,s:Phosphorylated S SEPHS1 43423.3 3 1 3720.1 44.56 HUMAN 1 14.4068 -22.0272 ESYGNSRSAPPTRGP-p P38159;S293-p ESYGNSRSAPPTRGP 0.122884208631954 0.301368477994011 0.272333333333333 0.100666666666667 18.9579271402816 6.87745035256652 0.272333333333333 0.100666666666667 0.0127118068683022 0.205236672459719 3.65879316102977 1.43915338268601 P38159 RBMX P38159.S293.p_RBMX P38159_S293s _1_1_293_293 P38159 P38159|P38159-2|H3BUY5 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5620.5824.3 17.76 10.42 3.658 6 1 1 0 660.6559 1899.9874 S293s TMT10 293 (R) sAPPTRGPPPSYGGSSR (Y) S(0.99)APPT(0.0)RGPPPS(0.0)Y(0.0)GGS(0.0)S(0.0)R s:Phosphorylated S RBMX 42331.1 3 23 102.1 595.29 HUMAN 1 18.9579 6.8775 ESYLSKNSEDDELAK-p Q96T23;S1258-p ESYLSKNSEDDELAK 0.145152146047681 0.0935120785392613 0.699333333333333 0.994 17.0922747937089 13.6119317204123 0.699333333333333 0.994 0.0195331605916904 0.0435318203229505 3.28083126282106 2.80090205412649 Q96T23 RSF1 Q96T23.S1258.p_RSF1 Q96T23_S1258s_1_1_1258_1258 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18452.18452.4 9.75 9.75 1.224 8 1 1 0 804.6448 3134.5832 N1257n S1258s TMT10 1244 (R) LSSSESEESYLSKnsEDDELAK (E) LS(0.0)S(0.0)S(0.0)ES(0.0)EES(0.0)Y(0.0)LS(0.0)KN(1.0)S(0.99)EDDELAK K:TMT10,n:Deamidated,s:Phosphorylated S RSF1 165358.1 1 17 39.1 857.38 HUMAN 1 17.0923 13.6119 ESYMNLKSPLGSKSS-p Q5VZ89-7;S1293-p ESYMNLKSPLGSKSS 0.334094354200354 0.141739706695822 0.169666666666667 0.233666666666667 8.88718110544438 11.1800446027216 0.169666666666667 0.233666666666667 0.129205764311672 0.0762071183395147 1.78883347077685 2.18667758053582 Q5VZ89 DENND4C Q5VZ89.7.S1293.p_DENND4C Q5VZ89-7_S1293s _1_1_1293_1293 Q5VZ89-7 Q5VZ89-7|Q5VZ89-3|Q5VZ89-5 Isoform 2 of DENN domain-containing protein 4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32366.32366.3 19.79 19.79 2.279 4 1 1 0 959.5071 2796.542 S1293s TMT10 1280 (R) NLADEIESYMNLKsPLGSK (S) NLADEIES(0.0)Y(0.0)MNLKS(0.99)PLGS(0.0)K K:TMT10,s:Phosphorylated S DENND4C 220154.2 4 17 116.1 565.52 HUMAN 1 8.8872 11.18 ESYQEAVSEDEDFID-p Q9P241;S477-p ESYQEAVSEDEDFID 0.148752032948153 0.35158293067447 0.259333333333333 -0.108 16.695020165763 6.01737203156031 0.259333333333333 -0.108 0.021404149880772 0.250185880877388 3.20280538477965 -1.28735061401547 Q9P241 ATP10D Q9P241.S477.p_ATP10D Q9P241_S477s _1_1_477_477 Q9P241 Q9P241|Q9P241-2|Q6PEW3 Probable phospholipid-transporting ATPase VD HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.32381.32381.5 20.94 15.68 3.906 7 1 1 0 783.1807 3831.9111 S477s TMT10 468 (R) RLESYQEAVsEDEDFIDTVSGSLSNMAKPR (A) RLES(0.0)Y(0.0)QEAVS(0.99)EDEDFIDT(0.0)VS(0.0)GS(0.0)LS(0.0)NMAKPR K:TMT10,s:Phosphorylated S ATP10D 162210.8 2 2 2880.1 67.35 HUMAN 1 16.695 -6.0174 ESYSVYVYKVLKQVH-p U3KQK0;Y43-p ESYSVYVYKVLKQVH 0.516987683329206 0.277369724582854 0.168666666666667 -0.226333333333333 5.29038606737402 7.33820557685555 0.168666666666667 -0.226333333333333 0.295774952483907 0.184577790237225 1.1570165826809 -1.51965365813642 U3KQK0 NotFound U3KQK0.Y43.p_NotFound U3KQK0_Y43y _1_1_43_43 U3KQK0 U3KQK0|Q99880|Q99879|Q99877|Q5QNW6 Histone H2B GG20160819_MSz_CCLE_T4D7_pY_Injection_02.17401.17401.3 10.8 10.8 5.646 5 1 1 0 678.3711 1953.13 Y43y TMT10 35 (R) KESYSVYVyK (V) KES(0.0)Y(0.0)S(0.0)VY(0.0)VY(0.99)K K:TMT10,y:Phosphorylated Y HIST1H2BN 18803.6 1 3 50.1 44.01 HUMAN 1 5.2904 -7.3382 ETAPPPPSPVSEKPL-p Q9Y6D6;S1555-p ETAPPPPSPVSEKPL 0.10503732738293 0.663746177847037 -0.318 -0.047 20.6108902522343 2.43766450761236 -0.318 -0.047 0.00868782320949084 0.570470970267119 -4.01129790004512 -0.603607547610199 Q9Y6D6 ARFGEF1 Q9Y6D6.S1555.p_ARFGEF1 Q9Y6D6_S1555s _1_1_1555_1555 Q9Y6D6 Q9Y6D6 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23555.24180.5 24.75 21.62 2.358 9 1 1 0 926.9053 4550.5226 S1555s TMT10 1533 (K) TTIPHALLTWRPNSGETAPPPPsPVSEKPLDTISQK (S) T(0.0)T(0.0)IPHALLT(0.0)WRPNS(0.0)GET(0.0)APPPPS(0.99)PVS(0.0)EKPLDT(0.0)IS(0.0)QK K:TMT10,s:Phosphorylated S ARFGEF1 210988.4 3 12 381.1 335.01 HUMAN 1 -20.6109 -2.4377 ETASEPLSEPESQRK-p Q7L4E1;S224-p ETASEPLSEPESQRK 0.844490429219358 0.106545584449678 0.0316666666666667 0.179666666666667 1.41890858767552 12.8461940993072 0.0316666666666667 0.179666666666667 0.721288721294796 0.0519254883954848 0.375890141032605 2.48204593352313 Q7L4E1 FAM73B Q7L4E1.S224.p_FAM73B Q7L4E1_S224s _1_1_224_224 Q7L4E1 Q7L4E1|Q7L4E1-3 Mitoguardin 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10175.10175.5 16.67 17.08 4.632 4 1 1 0 576.4921 2798.4685 S224s TMT10 211 (R) DGLRNPETASEPLsEPESQRK (E) DGLRNPET(0.0)AS(0.0)EPLS(0.99)EPES(0.0)QRK K:TMT10,s:Phosphorylated S MIGA2 65929 3 4 1662.1 122.67 HUMAN 1 1.4189 12.8462 ETDGSNLSGVSAKCA-p Q9UMX1;S267-p ETDGSNLSGVSAKCA 0.258179771699293 0.748227404479496 0.2 0.0333333333333334 11.1750833884651 1.73980922559929 0.2 0.0333333333333334 0.0762942241840404 0.669914036371546 2.1868112608055 0.45032767086869 Q9UMX1 SUFU Q9UMX1.S267.p_SUFU Q9UMX1_S267s _1_1_267_267 Q9UMX1 Q9UMX1|Q9UMX1-3 Suppressor of fused homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15050.15050.3 7.4 7.4 2.347 4 1 1 0 658.3373 1893.0329 S267s TMT10 258 (K) GIETDGSNLsGVSAK (C) GIET(0.0)DGS(0.0)NLS(0.99)GVS(0.0)AK K:TMT10,s:Phosphorylated S SUFU 54288.1 1 1 2747.1 71.93 HUMAN 1 11.1751 1.7398 ETDHRNSSPGEASLL-p Q76FK4;S1099-p ETDHRNSSPGEASLL 0.470992236672623 0.720716851257595 0.122333333333333 -0.066 6.03767315578159 1.96041483848155 0.122333333333333 -0.066 0.249019114479126 0.636734697047213 1.29127198346847 -0.499960039487585 Q76FK4 NOL8 Q76FK4.S1099.p_NOL8 Q76FK4_S1099s _1_1_1099_1099 Q76FK4 Q76FK4|Q76FK4-4|Q76FK4-2 Nucleolar protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14993.14993.2 12.01 12.01 1.102 3 1 1 0 770.8763 1460.7794 S1099s Hydrogen 1097 (R) NSsPGEASLLEK (E) NS(0.0)S(0.99)PGEAS(0.0)LLEK K:TMT10-Lys-Only,s:Phosphorylated S NOL8 132527 4 8 605.1 262.45 HUMAN 1 6.0377 -1.9604 ETDKEQDSEMEKGGR-p P49321-3;S178-p ETDKEQDSEMEKGGR 0.494030579971779 0.905186342019286 -0.171333333333333 0.017 5.63968839461511 0.603857250804577 -0.171333333333333 0.017 0.272917359341933 0.870190374158122 -1.22010043552753 0.171312100285569 P49321 NASP P49321.3.S178.p_NASP P49321-3_S178s _1_1_178_178 P49321-3 P49321-3|P49321-4 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11824.11824.3 17.14 11.8 6.912 3 1 1 0 987.8462 2881.5635 S178s TMT10 166 (K) SLAKPETDKEQDsEMEK (G) S(0.0)LAKPET(0.0)DKEQDS(0.99)EMEK K:TMT10,s:Phosphorylated S NASP 86552 2 5 87.1 626.46 HUMAN 1 -5.6397 0.6039 ETDNGYVSLDGKKTV-p Q8N3S3;S279-p ETDNGYVSLDGKKTV 0.157246543795891 0.0912971014250874 -0.326 -0.193333333333333 16.1145334153343 13.7495572921164 -0.326 -0.193333333333333 0.0244650810274981 0.0421739492204615 -3.0902128877057 -2.64549816640767 Q8N3S3 PHTF2 Q8N3S3.S279.p_PHTF2 Q8N3S3_S279s _1_1_279_279 Q8N3S3 Q8N3S3|Q8N3S3-2|Q8N3S3-3|Q8N3S3-4|Q8N3S3-7|Q8N3S3-5|Q8N3S3-6 Putative homeodomain transcription factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13439.13439.3 17.53 17.53 2.782 5 1 1 0 794.4124 2301.2541 S279s TMT10 270 (K) STETDNGYVsLDGKK (T) S(0.0)T(0.0)ET(0.0)DNGY(0.0)VS(0.99)LDGKK K:TMT10,s:Phosphorylated S PHTF2 89782.6 2 1 3885.1 41.39 HUMAN 1 -16.1145 -13.7496 ETDPGRKSPSRPILD-p O60890;S652-p ETDPGRKSPSRPILD 0.499922522946638 0.0806267445067352 -0.134666666666667 0.266666666666667 5.54944493971739 14.5030486549376 -0.134666666666667 0.266666666666667 0.278647727815838 0.0354564405178189 -1.20386211604713 2.78401338151671 O60890 OPHN1 O60890.S652.p_OPHN1 O60890_S652s _1_1_652_652 O60890 O60890 Oligophrenin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20188.20188.4 19.6 19.6 2.935 2 1 1 0 765.9156 2980.6745 S652s TMT10 652 (K) sPSRPILDGKLEPCPEVDVGK (L) S(0.99)PS(0.0)RPILDGKLEPCPEVDVGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S OPHN1 92266.6 4 1 2894.1 66.64 HUMAN 1 -5.5494 14.503 ETDPLILSQVAFTPE-p A0A1B0GV68;S678-p ETDPLILSQVAFTPE 0.202015347196608 0.461641787037362 0.215 0.07 13.4900438897446 4.4768884647088 0.215 0.07 0.044770877961432 0.356706607013305 2.59975655281209 1.00707243050115 A0A1B0GV68 NotFound A0A1B0GV68.S678.p_NotFound A0A1B0GV68_S678s _1_1_678_678 A0A1B0GV68 A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33695.33695.3 14.52 15.56 2.874 4 1 1 0 938.4617 2733.3967 S678s TMT10 670 (K) SETDPLILsQVAFTPEAMDGLGGR (G) S(0.0)ET(0.0)DPLILS(0.99)QVAFT(0.0)PEAMDGLGGR s:Phosphorylated S FARP1 88555.5 1 19 147.1 514.5 HUMAN 1 13.49 4.4769 ETDSKTASPWKSARL-p A0A0D9SGF6;S1190-p ETDSKTASPWKSARL 0.10491918313695 0.00165401543705715 1.165 -1.68233333333333 20.6370872739218 44.2508811961102 1.165 -1.68233333333333 0.00863557524321268 3.75761153524166e-05 4.01702984819329 -12.219135596027 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.S1190.p_SPTAN1 A0A0D9SGF6_S1190s _1_1_1190_1190 A0A0D9SGF6 A0A0D9SGF6|Q13813-2|A0A0D9SF54|Q13813-3 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12119.12119.4 13.7 12.21 3.433 4 1 1 0 533.7774 2052.1216 S1190s TMT10 1182 (R) DETDSKTAsPWK (S) DET(0.0)DS(0.0)KT(0.0)AS(0.99)PWK K:TMT10,s:Phosphorylated S SPTAN1 288398.5 7 10 263.1 396.39 HUMAN 1 20.6371 -44.2509 ETDVFWKSLDFKEQV-p P35251;S552-p ETDVFWKSLDFKEQV 0.134264480831341 0.977359130366644 -0.415666666666667 0.003 17.9268772404531 0.142505717946341 -0.415666666666667 0.003 0.016118041734386 0.967719357013741 -3.44748176967599 0.0423712252042099 P35251 RFC1 P35251.S552.p_RFC1 P35251_S552s _1_1_552_552 P35251 P35251|P35251-2 Replication factor C subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20438.20438.3 14.47 14.47 14.474 4 1 1 0 879.78 2557.36 S552s TMT10 552 (K) sLDFKEQVAEETSGDSK (A) S(0.99)LDFKEQVAEET(0.0)S(0.0)GDS(0.0)K K:TMT10,s:Phosphorylated S RFC1 128765.8 1 14 316.1 367.51 HUMAN 1 -17.9269 0.1425 ETEADAPSPAPSLGE-p Q12873-3;S1660-p ETEADAPSPAPSLGE 0.110631198359183 0.587347925786436 0.303666666666667 0.0586666666666667 20.0105338730151 3.12426487947588 0.303666666666667 0.0586666666666667 0.00997577425284406 0.487049960042698 3.88121141438013 0.745433696095449 Q12873 CHD3 Q12873.3.S1660.p_CHD3 Q12873-3_S1660s _1_1_1660_1660 Q12873-3 Q12873-3|Q12873-2 Isoform 3 of Chromodomain-helicase-DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14017.14017.2 17.55 15.55 3.377 3 1 1 0 1033.9674 1986.964 S1660s TMT10 1652 (K) METEADAPsPAPSLGER (L) MET(0.0)EADAPS(0.99)PAPS(0.0)LGER s:Phosphorylated S CHD3 234573.2 12 54 49.3 753.68 HUMAN 1 20.0105 3.1243 ETEASEESLQFNLEK-p Q12888-2;S1007-p ETEASEESLQFNLEK 0.755115471714797 0.0181782257857241 -0.0526666666666667 0.360333333333333 2.33153949325318 23.9592613770723 -0.0526666666666667 0.360333333333333 0.584582823661308 0.00401859150916669 -0.58103338671776 4.77928354493486 Q12888 TP53BP1 Q12888.2.S1007.p_TP53BP1 Q12888-2_S1004sS1007s_2_2_1004_1007 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22897.22897.4 14.54 14.54 3.185 5 2 2 0 934.9716 3576.9364 S1004s S1007s TMT10 996 (K) LVSPETEAsEEsLQFNLEKPATGERK (N) LVS(0.0)PET(0.0)EAS(0.99)EES(0.99)LQFNLEKPAT(0.0)GERK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 8 98 3.1 2297.07 HUMAN 1 -2.3315 23.9593 ETEEDTVSVSKKEKN-p Q13435;S317-p ETEEDTVSVSKKEKN 0.989636413447885 0.00106093798192059 0.00599999999999998 1.42633333333333 0.0923025827947155 50.5293958230067 0.00599999999999997 1.42633333333333 0.978970807960077 8.85238752930598e-06 0.0275995801454596 16.055697778901 Q13435 SF3B2 Q13435.S317.p_SF3B2 Q13435_S317s _1_1_317_317 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13080.13080.4 18.65 18.65 1.635 8 1 1 0 709.8658 2756.4769 S317s TMT10 302 (R) SSLGQSASETEEDTVsVSKK (E) S(0.0)S(0.0)LGQS(0.0)AS(0.0)ET(0.0)EEDT(0.0)VS(0.99)VS(0.0)KK K:TMT10,s:Phosphorylated S SF3B2 100339.9 2 7 193.1 462.57 HUMAN 1 0.0923 50.5294 ETEERKDSDDEKSDR-p Q14C86-6;S993-p ETEERKDSDDEKSDR 0.942896336607154 0.0327984188490608 0.0386666666666667 0.282666666666667 0.502139575624988 20.0241043222005 0.0386666666666667 0.282666666666667 0.890811966602339 0.00994465148746572 0.14386650356569 3.88048860465158 Q14C86 GAPVD1 Q14C86.6.S993.p_GAPVD1 Q14C86-6_S993s _1_1_993_993 Q14C86-6 Q14C86-6|Q14C86-2|Q14C86-5|Q14C86-4|Q14C86-3|F8W9S7 Isoform 6 of GTPase-activating protein and VPS9 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4932.4932.4 10.8 10.8 3.088 2 1 1 0 577.0349 2225.15 S993s TMT10 985 (R) GETEERKDsDDEK (S) GET(0.0)EERKDS(0.99)DDEK K:TMT10,s:Phosphorylated S GAPVD1 167648.8 7 15 268.1 394.98 HUMAN 1 0.5021 20.0241 ETEETEGSLHCCKDQ-p Q9Y4E8;S630-p ETEETEGSLHCCKDQ 0.313268519533153 0.0824855089069194 -0.184666666666667 0.229333333333333 9.42878689199762 14.3538033401509 -0.184666666666667 0.229333333333333 0.11405683362436 0.0366960793297669 -1.88261785738183 2.75640759067327 Q9Y4E8 USP15 Q9Y4E8.S630.p_USP15 Q9Y4E8_S630s _1_1_630_630 Q9Y4E8 Q9Y4E8|Q9Y4E8-3|Q9Y4E8-2 Ubiquitin carboxyl-terminal hydrolase 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10669.10669.3 14.44 13.55 2.281 5 1 1 0 807.0384 2339.1259 S630s TMT10 620 (K) ISTETEETEGsLHCCK (D) IS(0.0)T(0.0)ET(0.0)EET(0.0)EGS(0.99)LHCCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S USP15 113672.2 1 6 1214.1 165.83 HUMAN 1 -9.4288 14.3538 ETEGERNSPNPRSVR-p Q5VUA4;S2091-p ETEGERNSPNPRSVR 0.540716629644627 0.0091624481512753 0.0813333333333333 0.467 4.92824178323138 28.8229863318915 0.0813333333333333 0.467 0.321496183441681 0.00131129790334896 1.09089147412959 6.07272364549212 Q5VUA4 ZNF318 Q5VUA4.S2091.p_ZNF318 Q5VUA4_S2091s _1_1_2091_2091 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20794.20794.4 14.52 14.52 1.149 3 1 1 0 596.5438 2303.1829 S2091s TMT10 2078 (K) TLVLDFETEGERNsPNPR (S) T(0.0)LVLDFET(0.0)EGERNS(0.99)PNPR s:Phosphorylated S ZNF318 252762.4 6 34 37.1 870.88 HUMAN 1 4.9282 28.823 ETEGGGNSQQEPVVG-p A4D2B0;S252-p ETEGGGNSQQEPVVG 0.171158122502722 0.125008532965246 0.217333333333333 0.258333333333333 15.2893429274784 11.9100523918483 0.217333333333333 0.258333333333333 0.0295846003745812 0.0644161494517321 2.93289590239073 2.31524546641788 A4D2B0 MBLAC1 A4D2B0.S252.p_MBLAC1 A4D2B0_S252s _1_1_252_252 A4D2B0 A4D2B0 Metallo-beta-lactamase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14022.14022.3 21.49 21.49 7.006 3 1 1 0 1034.127 3020.3918 S252s TMT10 240 (R) EASQPETEGGGNsQQEPVVGDEEPALH (-) EAS(0.0)QPET(0.0)EGGGNS(0.99)QQEPVVGDEEPALH s:Phosphorylated S MBLAC1 27315.9 3 1 5234.1 21.49 HUMAN 1 15.2893 11.9101 ETEHAKGSPGGYLGA-p O60551;S38-p ETEHAKGSPGGYLGA 0.328661318378337 0.0752957179622319 -0.218333333333333 0.216 9.03808449167749 14.9083314262254 -0.218333333333333 0.216 0.124793380917207 0.0322973475815358 -1.81495580379407 2.85942435023958 O60551 NMT2 O60551.S38.p_NMT2 O60551_S38s _1_1_38_38 O60551 O60551 Glycylpeptide N-tetradecanoyltransferase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14459.14459.3 13.13 9.65 6.151 2 1 1 0 482.2587 1364.7938 S38s TMT10 37 (K) GsPGGYLGAK (K) GS(0.99)PGGY(0.0)LGAK K:TMT10,s:Phosphorylated S NMT2 57321.5 5 1 2519.1 80.26 HUMAN 1 -9.0381 14.9083 ETEKAPPSPEQLPRE-p Q8TDI0;S1631-p ETEKAPPSPEQLPRE 0.204713889706557 0.293628633431774 -0.261333333333333 0.101 13.321721823349 7.02458250886504 -0.261333333333333 0.101 0.0465401541762129 0.198400037138386 -2.5692043271131 1.46490942184059 Q8TDI0 CHD5 Q8TDI0.S1631.p_CHD5 Q8TDI0_S1631s _1_1_1631_1631 Q8TDI0 Q8TDI0 Chromodomain-helicase-DNA-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18389.18389.3 14.26 9.64 99 1 1 1 0 818.774 2374.3382 S1631s TMT10 1628 (K) APPsPEQLPREEVLPEK (E) APPS(1.0)PEQLPREEVLPEK K:TMT10,s:Phosphorylated S CHD5 224643 1 6 1884.1 109.13 HUMAN 1 -13.3217 7.0246 ETEQRCESLNTRTVY-p P52732;S821-p ETEQRCESLNTRTVY 0.809310350541982 0.00750752553367216 -0.042 -0.591666666666667 1.76514407020704 30.3763077388957 -0.042 -0.591666666666667 0.666017426875365 0.000916999768668184 -0.456139633900046 -6.53690519375704 P52732 KIF11 P52732.S821.p_KIF11 P52732_S821s _1_1_821_821 P52732 P52732 Kinesin-like protein KIF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7452.7452.3 13.25 13.25 2.209 4 1 1 0 720.6716 2080.029 S821s TMT10 811 (K) ISQETEQRCEsLNTR (T) IS(0.0)QET(0.0)EQRCES(0.99)LNT(0.0)R C:Carbamidomethylation,s:Phosphorylated S KIF11 120183.8 1 1 3310.1 54.27 HUMAN 1 -1.7651 -30.3763 ETESAPGSPRAVTPV-p Q6PKG0;S521-p ETESAPGSPRAVTPV 0.841711270685265 0.27612215831907 0.0736666666666667 -0.373333333333333 1.44784827653422 7.36411112716359 0.0736666666666667 -0.373333333333333 0.716498313265998 0.183480065832144 0.382727998314502 -1.52416708636969 Q6PKG0 LARP1 Q6PKG0.S521.p_LARP1 Q6PKG0_S521s _1_1_521_521 Q6PKG0 Q6PKG0 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4000.4000.4 21.86 21.86 4.834 4 1 1 0 564.0326 2173.1402 S521s TMT10 509 (R) QHYQKETESAPGsPR (A) QHY(0.0)QKET(0.0)ES(0.0)APGS(0.99)PR K:TMT10,s:Phosphorylated S LARP1 123907.4 5 45 28.1 931.95 HUMAN 1 1.4478 -7.3641 ETESKCDSEGEEDEE-p P29374;S561-p ETESKCDSEGEEDEE 0.164162708749184 0.00335441543722098 -0.572 0.680666666666667 15.71877925463 37.0218790587455 -0.572 0.680666666666667 0.0267992151008078 0.000198523578100237 -3.01437728101632 8.86921142605557 P29374 ARID4A P29374.S561.p_ARID4A P29374_S561s _1_1_561_561 P29374 P29374|P29374-2|P29374-3 AT-rich interactive domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13140.13140.4 19.77 19.77 2.547 6 1 1 0 1076.217 4221.8837 S561s TMT10 549 (K) SQEREETESKCDsEGEEDEEDMEPCLTGTK (V) S(0.0)QEREET(0.0)ES(0.0)KCDS(0.99)EGEEDEEDMEPCLT(0.0)GT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ARID4A 143719.1 1 2 532.1 280.77 HUMAN 1 -15.7188 37.0219 ETESLHGSSGKLTGS-p Q9NV70;S463-p ETESLHGSSGKLTGS 0.108274227113564 0.0923945894091804 -0.486333333333333 0.381666666666667 20.2570314281019 13.6812600344161 -0.486333333333333 0.381666666666667 0.00942533634826794 0.0428424202087931 -3.93433049979219 2.63304533101894 Q9NV70 EXOC1 Q9NV70.S463.p_EXOC1 Q9NV70_S459sS463s_2_2_459_463 Q9NV70 Q9NV70 Exocyst complex component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9621.9621.4 12.05 12.05 1.251 5 2 2 0 656.0752 2461.3501 S459s S463s TMT10 450 (K) ESAVKQETEsLHGsSGK (L) ES(0.0)AVKQET(0.0)ES(0.99)LHGS(0.99)S(0.0)GK K:TMT10,s:Phosphorylated S EXOC1 102835.5 2 3 871.1 209.68 HUMAN 1 -20.257 13.6813 ETGFRTISSLEEIVE-p Q8IY95;S229-p ETGFRTISSLEEIVE 0.961964786623094 0.0140166815842457 -0.01 0.397333333333333 0.325028124508327 25.7095517483543 -0.01 0.397333333333333 0.9278914811686 0.00268562162444826 -0.0947918063713404 5.21900219746546 Q8IY95 TMEM192 Q8IY95.S229.p_TMEM192 Q8IY95_S229s _1_1_229_229 Q8IY95 Q8IY95|Q8IY95-2 Transmembrane protein 192 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.31119.31119.2 8.71 8.71 1.129 3 1 1 0 893.4858 1705.9988 S229s TMT10 227 (R) TIsSLEEIVEK (Q) T(0.0)IS(0.99)S(0.0)LEEIVEK K:TMT10,s:Phosphorylated S TMEM192 31321.1 4 1 4391.1 32.13 HUMAN 1 -0.325 25.7096 ETGGHRRSFPPRTNP-p Q5VTI5;S318-p ETGGHRRSFPPRTNP 0.922642065307985 0.11902247064563 0.023 -0.181666666666667 0.685242540630644 12.18924931742 0.023 -0.181666666666667 0.854035150748008 0.0604053031554977 0.192947725392504 -2.3647459141507 Q5VTI5 NotFound Q5VTI5.S318.p_NotFound Q5VTI5_S318s _1_1_318_318 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6831.7171.3 10.56 10.56 10.564 2 1 1 0 489.9112 1387.7531 S318s Hydrogen 318 (R) sFPPRTNPDK (I) S(0.99)FPPRT(0.0)NPDK K:TMT10-Lys-Only,s:Phosphorylated S PLEKHA6 119745.7 1 10 52.1 743.36 HUMAN 1 0.6852 -12.1892 ETGITVASLERFSTY-p Q8WU90;S351-p ETGITVASLERFSTY 0.729757185802638 0.892665266767967 0.0513333333333333 -0.0226666666666667 2.59709011758239 0.691828505075927 0.0513333333333333 -0.022691789900904 0.549909203466067 0.852741009856977 0.637317462386248 -0.194665563332938 Q8WU90 ZC3H15 Q8WU90.S351.p_ZC3H15 Q8WU90_S351s _1_1_351_351 Q8WU90 Q8WU90 Zinc finger CCCH domain-containing protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19078.19078.2 12.66 12.66 1.26 3 1 1 0 907.4449 1733.9119 S351s TMT10 341 (R) DVDETGITVAsLER (F) DVDET(0.0)GIT(0.0)VAS(0.99)LER s:Phosphorylated S ZC3H15 49001 2 2 2779.1 70.93 HUMAN 1 2.5971 -0.6918 ETGKKIGSTENISNT-p Q7Z6E9;S1221-p ETGKKIGSTENISNT 0.142325066015487 0.499524492592479 -0.631333333333333 0.0656666666666667 17.2974980311177 4.03356741732271 -0.631333333333334 0.0656666666666667 0.0186316019342844 0.395041988128298 -3.32146121094066 0.923383263630669 Q7Z6E9 RBBP6 Q7Z6E9.S1221.p_RBBP6 Q7Z6E9_S1221s _1_1_1221_1221 Q7Z6E9 Q7Z6E9|Q7Z6E9-2 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12385.12385.3 15.81 10.25 1.105 5 1 1 0 834.4426 2421.344 S1221s TMT10 1219 (K) IGsTENISNTKEPSEK (L) IGS(0.99)T(0.0)ENIS(0.0)NT(0.0)KEPS(0.0)EK K:TMT10,s:Phosphorylated S RBBP6 202473.6 9 18 27.1 935.6 HUMAN 1 -17.2975 4.0336 ETGKLQGSGVSLASK-p Q09666;S5851-p ETGKLQGSGVSLASK 0.141557816596311 0.00259997565261951 -0.588 0.836333333333333 17.3551579995194 39.4483006907023 -0.588 0.836333333333333 0.0183858706350073 0.00011354550100841 -3.33291688889884 9.88595974135337 Q09666 AHNAK Q09666.S5851.p_AHNAK Q09666_S5851s _1_1_5851_5851 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14422.14422.4 23.72 20.47 1.677 7 1 1 0 823.1691 3209.6893 S5851s TMT10 5834 (K) GHYEVTGSDDETGKLQGsGVSLASK (K) GHY(0.0)EVT(0.0)GS(0.0)DDET(0.0)GKLQGS(0.99)GVS(0.0)LAS(0.0)K K:TMT10,s:Phosphorylated S AHNAK 629603.7 7 165 1.1 4313.36 HUMAN 1 -17.3552 39.4483 ETGLYRISGCDRTVK-p Q9H0H5;S387-p ETGLYRISGCDRTVK 0.941100878539265 0.0276888874625635 0.011 0.282666666666667 0.518702167400846 21.1203140905189 0.011 0.282666666666667 0.887421166695815 0.00772624705299797 0.148372589093235 4.11948078917157 Q9H0H5 RACGAP1 Q9H0H5.S387.p_RACGAP1 Q9H0H5_S387s _1_1_387_387 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15430.15430.3 13.38 13.38 3.791 4 1 1 0 669.658 1926.9905 S387s TMT10 377 (R) GLTETGLYRIsGCDR (T) GLT(0.0)ET(0.0)GLY(0.0)RIS(0.99)GCDR C:Carbamidomethylation,s:Phosphorylated S RACGAP1 71709.9 1 13 574.1 268.64 HUMAN 1 0.5187 21.1203 ETHMETHSDNPLRCD-p Q92766;S231-p ETHMETHSDNPLRCD 0.477468266229797 0.740379281315643 0.105666666666667 -0.0333333333333333 5.90672718964081 1.79975641855822 0.105666666666667 -0.0333333333333333 0.256641734065629 0.66073050516179 1.26792995240872 -0.463933445552094 Q92766 RREB1 Q92766.S231.p_RREB1 Q92766_S231s _1_1_231_231 Q92766 Q92766-6|Q92766-2|Q92766-3|Q92766-5 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18915.18915.5 25.68 25.68 1.589 5 1 1 0 684.9045 3340.5169 S231s TMT10 221 (K) YGLETHMETHsDNPLRCDICCVTFR (T) Y(0.0)GLET(0.0)HMET(0.0)HS(0.99)DNPLRCDICCVT(0.0)FR C:Carbamidomethylation,s:Phosphorylated S RREB1 184269.8 5 12 179.1 480.48 HUMAN 1 5.9067 -1.7998 ETHWVPVSWLHS___-p Q5T2T1;S572-p ETHWVPVSWLHS___ 0.0429314820571298 0.653502903289504 -0.506333333333333 -0.0586666666666666 30.4271259680759 2.52380580878256 -0.506333333333333 -0.0586666666666666 0.000906332186211127 0.559267289660217 -6.56313755051736 -0.621833942425607 Q5T2T1 MPP7 Q5T2T1.S572.p_MPP7 Q5T2T1_S572s _1_1_572_572 Q5T2T1 Q5T2T1 MAGUK p55 subfamily member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30077.30077.4 18.66 18.66 1.304 6 1 1 0 738.6257 2871.5082 S572s TMT10 557 (K) TTFDKLETETHWVPVsWLHS (-) T(0.0)T(0.0)FDKLET(0.0)ET(0.0)HWVPVS(0.99)WLHS(0.0) K:TMT10,s:Phosphorylated S MPP7 65693.7 2 8 1298.1 156.56 HUMAN 1 -30.4271 -2.5238 ETIARFGSGPCKTRD-p Q9HDC9;S137-p ETIARFGSGPCKTRD 0.814399806622497 0.137834895278433 -0.0406666666666667 0.155 1.71033710448582 11.3403991018439 -0.0406666666666667 0.155 0.674475672070887 0.0734446371934563 -0.443653691574176 2.21482100552681 Q9HDC9 APMAP Q9HDC9.S137.p_APMAP Q9HDC9_S137sT142tY169y_3_3_137_169 Q9HDC9 Q9HDC9|Q9HDC9-2 Adipocyte plasma membrane-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.39276.39276.5 7.07 3.07 1.787 4 3 3 0 1176.5656 5636.9502 S137s T142t N160n Y169y N176n Hydrogen 135 (R) FGsGPCKtRDDEPVCGRPLGIRAGPnGTLFVADAyKGLFEVnPWK (R) FGS(0.99)GPCKT(0.99)RDDEPVCGRPLGIRAGPN(1.0)GT(0.0)LFVADAY(0.99)KGLFEVN(1.0)PWK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated,y:Phosphorylated Y APMAP 46650.7 5 4 4467.1 30.97 HUMAN 1 -1.7103 11.3404 ETIEIKVSNDIIQSK-p O15394;S824-p ETIEIKVSNDIIQSK 0.502400574250066 0.00176472384256938 -0.221333333333333 1.001 5.51469793021063 43.54462452826 -0.221333333333333 1.001 0.28088607338648 4.42117338726859e-05 -1.19759907632699 11.8466177161363 O15394 NCAM2 O15394.S824.p_NCAM2 O15394_S824s _1_1_824_824 O15394 O15394|H9KV31 Neural cell adhesion molecule 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28012.28012.4 18.08 18.08 4.86 3 1 1 0 752.9169 2928.6861 S824s TMT10 812 (K) EALNPETIEIKVsNDIIQSK (E) EALNPET(0.0)IEIKVS(0.99)NDIIQS(0.0)K K:TMT10,s:Phosphorylated S NCAM2 93843.3 2 5 1267.1 160.16 HUMAN 1 -5.5147 43.5446 ETINRYGSLNSLEST-p Q9Y6D6;S664-p ETINRYGSLNSLEST 0.678232012441015 0.0811012265203804 0.062 0.199666666666667 3.15552868204271 14.4649118419904 0.062 0.199666666666667 0.483556395687598 0.0357691661332984 0.751828711283572 2.77695099629358 Q9Y6D6 ARFGEF1 Q9Y6D6.S664.p_ARFGEF1 Q9Y6D6_S664sS667s_2_2_664_667 Q9Y6D6 Q9Y6D6 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31189.31189.3 18.26 18.26 1.133 14 2 2 0 1440.3185 4159.0065 S664s S667s TMT10 662 (R) YGsLNsLESTSSSGIGSYSTQMSGTDNPEQFEVLK (Q) Y(0.0)GS(0.99)LNS(0.99)LES(0.0)T(0.0)S(0.0)S(0.0)S(0.0)GIGS(0.0)Y(0.0)S(0.0)T(0.0)QMS(0.0)GT(0.0)DNPEQFEVLK K:TMT10,s:Phosphorylated S ARFGEF1 210988.4 17 19 381.1 335.01 HUMAN 1 3.1555 14.4649 ETKDLSMSTRSLKFG-p Q9Y3S2;S229-p ETKDLSMSTRSLKFG 0.281985085489238 0.135810016596193 -0.236666666666667 -0.194 10.3947255025691 11.4271308709789 -0.236666666666667 -0.194 0.0913119147502184 0.0719924432798434 -2.05037904938915 -2.23006489823699 Q9Y3S2 ZNF330 Q9Y3S2.S229.p_ZNF330 Q9Y3S2_S229s _1_1_229_229 Q9Y3S2 Q9Y3S2 Zinc finger protein 330 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9992.9992.2 8.02 1.47 1.416 3 1 1 0 559.7599 1038.5451 S229s TMT10 225 (K) DLSMsTR (S) DLS(0.0)MS(0.99)T(0.0)R s:Phosphorylated S ZNF330 37855.2 1 2 4301.1 34.03 HUMAN 1 -10.3947 -11.4271 ETKEESYSPSKDRNI-p Q96T23;S473-p ETKEESYSPSKDRNI 0.574624647827699 0.204279871594527 0.0976666666666667 -0.14 4.42745206195099 9.07402289371492 0.0976666666666667 -0.14 0.36079025096006 0.123764961373229 0.998005264196752 -1.82051672455866 Q96T23 RSF1 Q96T23.S473.p_RSF1 Q96T23_S473s _1_1_473_473 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15298.15298.4 17.73 13.6 3.595 6 1 1 0 591.3008 2282.2159 S473s TMT10 464 (K) FYETKEESYsPSK (D) FY(0.0)ET(0.0)KEES(0.0)Y(0.0)S(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S RSF1 165358.1 16 5 39.1 857.38 HUMAN 1 4.4275 -9.074 ETKIFTASNVSSVPL-p Q14157-5;S262-p ETKIFTASNVSSVPL 0.319460793173524 0.447259642779401 0.149666666666667 0.0733333333333333 9.27824141716417 4.65715533894964 0.149666666666667 0.0733333333333333 0.118079867808777 0.342203514960167 1.8565391075949 1.04063969659415 Q14157 UBAP2L Q14157.5.S262.p_UBAP2L Q14157-5_S262s _1_1_262_262 Q14157-5 Q14157-5|F8W726|Q14157-3|Q14157-1|Q14157-4 Isoform 5 of Ubiquitin-associated protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30333.30333.3 14.3 14.3 1.162 6 1 1 0 927.8165 2701.4722 S262s TMT10 258 (K) IFTAsNVSSVPLPAENVTITAGQR (I) IFT(0.0)AS(0.99)NVS(0.0)S(0.0)VPLPAENVT(0.0)IT(0.0)AGQR s:Phosphorylated S UBAP2L 116866.1 2 5 189.1 467.5 HUMAN 1 9.2782 4.6572 ETKKQQKSDSEEKSD-p Q99442;S307-p ETKKQQKSDSEEKSD 0.215315892700821 0.914097924536412 -0.491333333333333 -0.0136666666666666 12.8511027900143 0.547419719111331 -0.491333333333334 -0.0136666666666666 0.0518668318427536 0.881572487544501 -2.48427074431918 -0.156138802088097 Q99442 SEC62 Q99442.S307.p_SEC62 Q99442_S307s _1_1_307_307 Q99442 Q99442 Translocation protein SEC62 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6653.6653.5 10.69 10.69 2.362 4 1 1 0 779.8146 3815.0734 S307s TMT10 304 (K) QQKsDSEEKSDSEKKEDEEGK (V) QQKS(0.99)DS(0.0)EEKS(0.0)DS(0.0)EKKEDEEGK K:TMT10,s:Phosphorylated S SEC62 46203.3 2 3 1276.1 159.11 HUMAN 1 -12.8511 -0.5474 ETKKVLQSEGEAVDP-p Q8IWI9-4;S1996-p ETKKVLQSEGEAVDP 0.327770976645339 0.299510975538384 0.135666666666667 -0.123 9.06149007664376 6.91203816925919 0.135666666666667 -0.123 0.124122636625087 0.203608630630468 1.81900777716406 -1.44521274553969 Q8IWI9 MGA Q8IWI9.4.S1996.p_MGA Q8IWI9-4_S1996s _1_1_1996_1996 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3|Q8IWI9-2 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22252.22252.3 17.56 14.7 99 1 1 1 0 779.4109 2256.2487 S1996s TMT10 1993 (K) VLQsEGEAVDPEANVIK (Q) VLQS(1.0)EGEAVDPEANVIK K:TMT10,s:Phosphorylated S MGA 338321.5 2 16 141.1 523.06 HUMAN 1 9.0615 -6.912 ETKLDLISKGEEPRA-p Q99808-2;S333-p ETKLDLISKGEEPRA 0.968934064180308 0.112380248467204 -0.0113333333333333 -0.435 0.269161565171081 12.5223625551449 -0.0113333333333333 -0.435 0.939904748009793 0.0559453177051787 -0.0789566868539775 -2.42407281355684 Q99808 SLC29A1 Q99808.2.S333.p_SLC29A1 Q99808-2_S333s _1_1_333_333 Q99808-2 Q99808-2 Isoform 2 of Equilibrative nucleoside transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18948.18948.3 7.9 3.68 99 1 1 1 0 598.9982 1715.0104 S333s TMT10 329 (K) LDLIsKGEEPR (A) LDLIS(1.0)KGEEPR K:TMT10,s:Phosphorylated S SLC29A1 59703.7 1 1 7071.1 7.9 HUMAN 1 -0.2692 -12.5224 ETKSMIFSPASKVYN-p Q9P246-2;S760-p ETKSMIFSPASKVYN 0.664945111459205 0.00910024292117959 0.0703333333333333 -0.437 3.31507321446228 28.8705584417777 0.0703333333333333 -0.437 0.466114570058329 0.00129701248265106 0.783711871113856 -6.08654151671135 Q9P246 STIM2 Q9P246.2.S760.p_STIM2 Q9P246-2_S760s _1_1_760_760 Q9P246-2 Q9P246-2 Isoform 2 of Stromal interaction molecule 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20306.20306.2 10.54 6.16 1.787 3 1 1 0 753.3974 1425.8176 S760s TMT10 756 (K) SMIFsPASK (V) S(0.0)MIFS(0.99)PAS(0.0)K K:TMT10,s:Phosphorylated S STIM2 94867.7 1 6 1100.1 177.78 HUMAN 1 3.3151 -28.8706 ETLGNPPSPRHGHVM-p Q7Z6M1;S191-p ETLGNPPSPRHGHVM 0.633125556151465 0.416998133345667 0.0733333333333333 -0.0766666666666666 3.69892303029315 5.05208466370978 0.0733333333333333 -0.0766666666666666 0.426685315721918 0.312457917297994 0.85912242229321 -1.1133673738915 Q7Z6M1 RABEPK Q7Z6M1.S191.p_RABEPK Q7Z6M1_S191s _1_1_191_191 Q7Z6M1 Q7Z6M1|Q7Z6M1-2 Rab9 effector protein with kelch motifs HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26195.26195.3 22.54 22.54 2.006 5 1 1 0 996.1587 2906.4998 S191s TMT10 170 (K) LHVFDANTLTWSQPETLGNPPsPR (H) LHVFDANT(0.0)LT(0.0)WS(0.0)QPET(0.0)LGNPPS(0.99)PR s:Phosphorylated S RABEPK 41191.5 2 2 4210.1 35.37 HUMAN 1 3.6989 -5.0521 ETLIRSASPPLSREQ-p Q5T011;S2737-p ETLIRSASPPLSREQ 0.253185624491412 0.643842493749598 0.168333333333333 -0.0593333333333333 11.3718202264199 2.60689730298419 0.168333333333333 -0.0593333333333333 0.0729151842170881 0.548668806213763 2.22138206033585 -0.639288487194001 Q5T011 SZT2 Q5T011.S2737.p_SZT2 Q5T011_S2737s _1_1_2737_2737 Q5T011 Q5T011|Q5T011-5 KICSTOR complex protein SZT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6817.6817.2 10.48 4.42 2.703 3 1 1 0 562.2878 1043.6047 S2737s TMT10 2735 (R) SAsPPLSR (E) S(0.0)AS(0.99)PPLS(0.0)R s:Phosphorylated S SZT2 382015.9 1 13 964.1 193.97 HUMAN 1 11.3718 -2.6069 ETLPSFSSDEEDSVA-p Q9ULL5-3;S1382-p ETLPSFSSDEEDSVA 0.814137925555095 0.0820618228869866 0.0346666666666667 0.19 1.71634775887504 14.3912261042052 0.0346666666666667 0.19 0.673542840497657 0.0363812309798605 0.445026814060142 2.76332153155538 Q9ULL5 PRR12 Q9ULL5.3.S1382.p_PRR12 Q9ULL5-3_S1381sS1382s_2_2_1381_1382 Q9ULL5-3 Q9ULL5-3|Q9ULL5-2 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26558.26972.3 14.09 14.09 1.115 5 2 2 0 862.7283 2426.2339 S1381s S1382s TMT10 1373 (R) NLETLPSFssDEEDSVAK (N) NLET(0.0)LPS(0.0)FS(0.99)S(0.99)DEEDS(0.0)VAK K:TMT10,s:Phosphorylated S PRR12 212010 9 24 182.1 477.91 HUMAN 1 1.7163 14.3912 ETLRRSMSMEGNIRG-p Q8TEW8;S575-p ETLRRSMSMEGNIRG 0.102231937186315 0.141051295241334 -0.317666666666667 -0.168 20.9538765706905 11.2063426449958 -0.317666666666667 -0.168 0.00802809204024015 0.0757470520535257 -4.08671919064428 -2.19128958712842 Q8TEW8 PARD3B Q8TEW8.S575.p_PARD3B Q8TEW8_S575s _1_1_575_575 Q8TEW8 Q8TEW8|Q8TEW8-2|Q8TEW8-3|Q8TEW8-6|Q8TEW8-5 Partitioning defective 3 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11311.11311.2 8.55 8.55 2.181 2 1 1 0 667.2955 1253.618 S575s TMT10 573 (R) SMsMEGNIR (G) S(0.0)MS(0.99)MEGNIR s:Phosphorylated S PARD3B 133176.7 1 37 65.4 692.2 HUMAN 1 -20.9539 -11.2063 ETMEEYSTDEDEVDG-p Q8N128-2;T94-p ETMEEYSTDEDEVDG 0.512276531895754 0.24581520464409 -0.112 0.114 5.36943844061249 8.03142383040413 -0.112 0.114 0.29043981799866 0.157346692023419 -1.17134938867105 1.64008938681617 Q8N128 FAM177A1 Q8N128.2.T94.p_FAM177A1 Q8N128-2_S93sT94t_2_2_93_94 Q8N128-2 Q8N128-2 Isoform 2 of Protein FAM177A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26370.26568.3 28.7 28.7 1.155 5 2 2 0 1159.5101 3316.5819 S93s T94t TMT10 80 (R) VIHFVSGETMEEYstDEDEVDGLEK (K) VIHFVS(0.0)GET(0.0)MEEY(0.0)S(0.99)T(0.99)DEDEVDGLEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T FAM177A1 26101.7 53 2 1328.1 153.52 HUMAN 1 -5.3694 8.0314 ETNAVGPSPSSDTRQ-p Q6WCQ1-2;S326-p ETNAVGPSPSSDTRQ 0.241110034837602 0.241132504668816 0.318333333333333 -0.117 11.8075535445103 8.13703361932136 0.318333333333333 -0.117 0.0659545323839664 0.153566553703728 2.29824577589944 -1.65838908182424 Q6WCQ1 MPRIP Q6WCQ1.2.S326.p_MPRIP Q6WCQ1-2_S326s _1_1_326_326 Q6WCQ1-2 Q6WCQ1-2 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21549.21549.4 22.65 22.65 1.695 5 1 1 0 843.1567 3289.6411 S326s TMT10 307 (K) FEALDIEKAEHMETNAVGPsPSSDTR (Q) FEALDIEKAEHMET(0.0)NAVGPS(0.99)PS(0.0)S(0.0)DT(0.0)R K:TMT10,s:Phosphorylated S MPRIP 118899.7 2 7 204.1 449.03 HUMAN 1 11.8076 -8.137 ETNVKMESEGGADDS-p B4DY08;S240-p ETNVKMESEGGADDS 0.316072965526319 0.0122060462402088 -0.197666666666667 0.524 9.36470543145602 26.7158458522402 -0.197666666666667 0.524 0.115752254061132 0.00213017564416884 -1.87151574360683 5.48442549912504 B4DY08 NotFound B4DY08.S240.p_NotFound B4DY08_S240sS247s_2_2_240_247 B4DY08 B4DY08 Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17550.17550.5 19.41 19.41 2.489 3 2 2 0 975.8151 4715.1113 S240s S247s TMT10 232 (K) DETNVKMEsEGGADDsAEEGDLLDDDDNEDRGDDQVK (T) DET(0.0)NVKMES(0.99)EGGADDS(0.99)AEEGDLLDDDDNEDRGDDQVK K:TMT10,s:Phosphorylated S HNRNPC 32085.2 3 2 261.4 397.39 HUMAN 1 -9.3647 26.7158 ETPDGPLSPGKMEDI-p Q8IWI9-4;S1422-p ETPDGPLSPGKMEDI 0.190635430939797 0.327570173580285 -0.226666666666667 -0.0966666666666667 14.0744753449649 6.41831581921841 -0.226666666666667 -0.0966666666666667 0.0391338400410176 0.228122655320342 -2.70660255726589 -1.35841225369622 Q8IWI9 MGA Q8IWI9.4.S1422.p_MGA Q8IWI9-4_S1422s _1_1_1422_1422 Q8IWI9-4 Q8IWI9-4 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22547.22547.4 14.12 10.42 3.846 7 1 1 0 977.9827 3828.9326 S1422s TMT10 1412 (K) SGSETPDGPLsPGKMEDISPVQTDALDSVRER (L) S(0.0)GS(0.0)ET(0.0)PDGPLS(0.99)PGKMEDIS(0.0)PVQT(0.0)DALDS(0.0)VRER K:TMT10,s:Phosphorylated S MGA 338321.5 3 13 141.1 523.06 HUMAN 1 -14.0745 -6.4183 ETPDQVGSQRFSVNM-p Q02156;S234-p ETPDQVGSQRFSVNM 0.049158581421578 0.049248751055522 0.664666666666667 -0.257666666666667 29.0210744689438 17.4915974558384 0.664666666666667 -0.257666666666667 0.00125283117912442 0.0178172327954797 6.13972476941918 -3.35744389438832 Q02156 PRKCE Q02156.S234.p_PRKCE Q02156_S234s _1_1_234_234 Q02156 Q02156 Protein kinase C epsilon type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4849.4849.3 7.11 7.11 7.105 2 1 1 0 637.6639 1831.0074 S234s TMT10 225 (K) KQETPDQVGsQR (F) KQET(0.0)PDQVGS(0.99)QR K:TMT10,s:Phosphorylated S PRKCE 85041.6 1 1 1089.1 179.15 HUMAN 1 29.0211 -17.4916 ETPIVSKSLSSSLDD-p O95292;S156-p ETPIVSKSLSSSLDD 0.800737127611188 0.0811046262107646 0.0386666666666667 -0.221666666666667 1.85797900318895 14.4634323581548 0.0386666666666667 -0.221666666666667 0.651931701016998 0.0357813534670738 0.477115595771383 -2.77667713197643 O95292 VAPB O95292.S156.p_VAPB O95292_S156s _1_1_156_156 O95292 O95292 Vesicle-associated membrane protein-associated protein B/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16226.16680.3 16.12 10.7 3.242 5 1 1 0 726.0623 2096.2054 S156s TMT10 156 (K) sLSSSLDDTEVKK (V) S(0.99)LS(0.0)S(0.0)S(0.0)LDDT(0.0)EVKK K:TMT10,s:Phosphorylated S VAPB 27456.1 5 4 1400.1 146.44 HUMAN 1 1.858 -14.4634 ETPKAAESETPGKSP-p O76021;S421-p ETPKAAESETPGKSP 0.360899903549406 0.00117317834367865 0.145666666666667 -1.373 8.22882308393681 48.5805331985836 0.145666666666667 -1.373 0.15035493651534 1.38658558244095e-05 1.67483369873472 -14.7562266835856 O76021 RSL1D1 O76021.S421.p_RSL1D1 O76021_S421s _1_1_421_421 O76021 O76021|O76021-2 Ribosomal L1 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7494.7494.3 12.58 12.58 2.129 3 1 1 0 700.0388 2018.1373 S421s TMT10 418 (K) AAEsETPGKSPEK (K) AAES(0.99)ET(0.0)PGKS(0.0)PEK K:TMT10,s:Phosphorylated S RSL1D1 55199.7 4 8 643.1 254.92 HUMAN 1 8.2288 -48.5805 ETPKMELSLENVTVE-p Q5UIP0;S1893-p ETPKMELSLENVTVE 0.353365042516364 0.617760347709202 -0.162666666666667 -0.0716666666666666 8.39262393731222 2.84413827227004 -0.162666666666667 -0.0716666666666666 0.144789679330003 0.519500742692574 -1.70321139794677 -0.68847945347257 Q5UIP0 RIF1 Q5UIP0.S1893.p_RIF1 Q5UIP0_S1893s _1_1_1893_1893 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24195.24195.3 12.89 12.89 3.591 2 1 1 0 778.0522 2252.1667 S1893s TMT10 1890 (K) MELsLENVTVEGNACK (V) MELS(0.99)LENVT(0.0)VEGNACK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RIF1 276628.8 1 24 29.1 922.06 HUMAN 1 -8.3926 -2.8441 ETPMDIDSDDSKAAS-p Q8TDB6;S532-p ETPMDIDSDDSKAAS 0.986991548278162 0.163638191356053 -0.00366666666666667 -0.173333333333333 0.115998818495749 10.3347181476622 -0.00366666666666667 -0.173333333333333 0.973643834680026 0.0925823468095028 -0.0345938905269491 -2.03907130453656 Q8TDB6 DTX3L Q8TDB6.S532.p_DTX3L Q8TDB6_S532s _1_1_532_532 Q8TDB6 Q8TDB6 E3 ubiquitin-protein ligase DTX3L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11626.11626.3 17.57 17.57 4.481 3 1 1 0 738.6623 2134.0011 S532s TMT10 522 (K) EGHETPMDIDsDDSK (A) EGHET(0.0)PMDIDS(0.99)DDS(0.0)K K:TMT10,s:Phosphorylated S DTX3L 84636.9 2 5 2047.1 100.69 HUMAN 1 -0.116 -10.3347 ETPPAGASPVLTPQE-p P0C7T5;S251-p ETPPAGASPVLTPQE 0.753798137419162 0.0498458506736886 0.052 0.233333333333333 2.34489145661886 17.4149588315645 0.052 0.233333333333333 0.582788340264981 0.0181344386611755 0.583895006091209 3.34219189831459 P0C7T5 ATXN1L P0C7T5.S251.p_ATXN1L P0C7T5_S251s _1_1_251_251 P0C7T5 P0C7T5 Ataxin-1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22151.22151.5 22.72 15.35 3.842 7 1 1 0 864.8387 4240.1948 S251s TMT10 236 (R) LPAGYTLHETPPAGAsPVLTPQESQSALEAAAANGGQRPR (E) LPAGY(0.0)T(0.0)LHET(0.0)PPAGAS(0.99)PVLT(0.0)PQES(0.0)QS(0.0)ALEAAAANGGQRPR s:Phosphorylated S ATXN1L 73818.4 2 3 1155.1 171.78 HUMAN 1 2.3449 17.415 ETPSQRPSPLKRAPG-p P98174;S149-p ETPSQRPSPLKRAPG 0.795947364926604 0.00439819223566624 -0.042 -0.887 1.91557544545888 34.6307269433383 -0.042 -0.887 0.643342815640801 0.000344292296611935 -0.490023369562659 -7.95925596618688 P98174 FGD1 P98174.S149.p_FGD1 P98174_S149s _1_1_149_149 P98174 P98174 FYVE, RhoGEF and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11037.11037.3 14.83 10.79 1.429 5 1 1 0 810.4212 2349.2814 S149s TMT10 135 (R) SDPGPPTETPSQRPsPLK (R) S(0.0)DPGPPT(0.0)ET(0.0)PS(0.0)QRPS(0.99)PLK K:TMT10,s:Phosphorylated S FGD1 107757.1 3 4 1189.1 168.38 HUMAN 1 -1.9156 -34.6307 ETPTESVSEPEVATK-p P18858;S201-p ETPTESVSEPEVATK 0.596153096325033 0.033779367571616 -0.0816666666666667 -0.292333333333333 4.14596363838646 19.8338098082959 -0.0816666666666667 -0.292333333333333 0.384949390345034 0.0103900830547178 -0.94492985294424 -3.83981956977954 P18858 LIG1 P18858.S201.p_LIG1 P18858_S201s _1_1_201_201 P18858 P18858|P18858-3|P18858-2 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17965.17965.4 18.39 16.01 1.157 6 1 1 0 1041.7799 4084.1177 S201s TMT10 193 (K) AETPTESVsEPEVATKQELQEEEEQTKPPR (R) AET(0.0)PT(0.0)ES(0.0)VS(0.99)EPEVAT(0.0)KQELQEEEEQT(0.0)KPPR K:TMT10,s:Phosphorylated S LIG1 102361.8 3 11 302.1 376.44 HUMAN 1 -4.146 -19.8338 ETPTPGASKRKSRWD-p O75533;S332-p ETPTPGASKRKSRWD 0.617306864410826 0.855903931478296 -0.089 0.0303333333333333 3.88841475830848 0.953374971558056 -0.0890000000000001 0.0303333333333333 0.408468456397015 0.802901931809575 -0.895739012471088 0.262116131602891 O75533 SF3B1 O75533.S332.p_SF3B1 O75533_S332s _1_1_332_332 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11427.11427.3 19.39 14.26 4.966 4 1 1 0 637.9871 1831.9802 S332s TMT10 319 (R) GGDSIGETPTPGAsK (R) GGDS(0.0)IGET(0.0)PT(0.0)PGAS(0.99)K K:TMT10,s:Phosphorylated S SF3B1 146569.5 1 22 53.1 735.77 HUMAN 1 -3.8884 0.9534 ETQPKKDTPRKEKGS-p P26641-2;T280-p ETQPKKDTPRKEKGS 0.826798584688611 0.00633361180202018 -0.043 -2.12233333333333 1.59158248606532 31.6528173945179 -0.043 -2.12233333333333 0.693173180938172 0.000683468117800921 -0.416327244106909 -6.93938555430339 P26641 EEF1G P26641.2.T280.p_EEF1G P26641-2_T280t _1_1_280_280 P26641-2 P26641-2 Isoform 2 of Elongation factor 1-gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8658.8658.4 8.27 3.69 2.322 2 1 1 0 547.0553 2105.2322 T280t TMT10 271 (K) FAETQPKKDtPR (K) FAET(0.0)QPKKDT(0.99)PR K:TMT10,t:Phosphorylated T EEF1G 56491.1 6 4 2076.1 98.89 HUMAN 1 -1.5916 -31.6528 ETQQRRRSLGEQDQM-p P48681;S768-p ETQQRRRSLGEQDQM 0.712677932018996 0.00969114688411711 -0.0693333333333334 -0.574666666666667 2.76792730417611 28.3589195887625 -0.0693333333333334 -0.574666666666667 0.528697515555727 0.00145917722030612 -0.67286823943529 -5.93920633135294 P48681 NES P48681.S768.p_NES P48681_S768s _1_1_768_768 P48681 P48681 Nestin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22179.22179.4 15.76 15.76 15.757 2 1 1 0 766.1565 2981.6382 S768s Hydrogen 768 (R) sLGEQDQMTLRPPEKVDLEPLK (S) S(0.99)LGEQDQMT(0.0)LRPPEKVDLEPLK K:TMT10-Lys-Only,s:Phosphorylated S NES 177892.1 2 2 4288.1 34.15 HUMAN 1 -2.7679 -28.3589 ETQRRRLSPPSSSAA-p P50402;S49-p ETQRRRLSPPSSSAA 0.608202691544958 0.466096511668385 -0.0686666666666667 -0.081 3.998480880716 4.42023678954697 -0.0686666666666667 -0.081 0.398246448874801 0.361390158096204 -0.916839220320753 -0.996471051400984 P50402 EMD P50402.S49.p_EMD P50402_S49s _1_1_49_49 P50402 P50402 Emerin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24354.24354.5 22.31 18.01 4.095 14 1 1 0 1119.767 5514.8509 S49s TMT10 47 (R) RLsPPSSSAASSYSFSDLNSTRGDADMYDLPKKEDALLYQSK (G) RLS(0.99)PPS(0.0)S(0.0)S(0.0)AAS(0.0)S(0.0)Y(0.0)S(0.0)FS(0.0)DLNS(0.0)T(0.0)RGDADMY(0.0)DLPKKEDALLY(0.0)QS(0.0)K K:TMT10,s:Phosphorylated S EMD 29050.4 21 3 483.1 297.25 HUMAN 1 -3.9985 -4.4202 ETRALQDSWLQAQAV-p Q9BV73;S1927-p ETRALQDSWLQAQAV 0.171158122502722 0.0129755466680608 0.310666666666667 -0.480333333333333 15.2795430655253 26.2742684148477 0.310666666666667 -0.480333333333333 0.0296514334489112 0.00235815940319703 2.93104599737423 -5.36677193844192 Q9BV73 CEP250 Q9BV73.S1927.p_CEP250 Q9BV73_S1927s _1_1_1927_1927 Q9BV73 Q9BV73|Q9BV73-2 Centrosome-associated protein CEP250 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28882.28882.3 15.12 14.79 99 1 1 1 0 703.7223 2029.1846 S1927s TMT10 1923 (R) ALQDsWLQAQAVLK (E) ALQDS(1.0)WLQAQAVLK K:TMT10,s:Phosphorylated S CEP250 282045.1 1 3 1169.1 170.36 HUMAN 1 15.2795 -26.2743 ETRARSPSVAAMASP-p P25325-2;S17-p ETRARSPSVAAMASP 0.640113010201367 0.308072801409393 -0.105333333333333 0.129333333333333 3.61892947533239 6.75810846664856 -0.105333333333333 0.129333333333333 0.434617343019961 0.210954674534527 -0.843548721317449 1.41822299934502 P25325 MPST P25325.2.S17.p_MPST P25325-2_S17s _1_1_17_17 P25325-2 P25325-2 Isoform 2 of 3-mercaptopyruvate sulfurtransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16167.16167.3 17.72 17.72 1.336 3 1 1 0 595.2875 1703.877 S17s TMT10 15 (R) SPsVAAMASPQLCR (A) S(0.0)PS(0.99)VAAMAS(0.0)PQLCR C:Carbamidomethylation,s:Phosphorylated S MPST 35534.3 2 2 4149.1 36.6 HUMAN 1 -3.6189 6.7581 ETRSGPQSASTAVKE-p Q9BTC0;S127-p ETRSGPQSASTAVKE 0.83932781439026 0.191868498358087 0.036 0.200333333333333 1.4716427037055 9.42790976085842 0.036 0.200333333333333 0.712583446945925 0.114079871656831 0.388331455560729 1.88175342839235 Q9BTC0 DIDO1 Q9BTC0.S127.p_DIDO1 Q9BTC0_S127s _1_1_127_127 Q9BTC0 Q9BTC0|Q9BTC0-1|Q9BTC0-3|Q9BTC0-2 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7887.7887.2 13.86 8.26 2.211 4 1 1 0 785.9175 1490.8579 S127s TMT10 123 (R) SGPQsASTAVK (E) S(0.0)GPQS(0.99)AS(0.0)T(0.0)AVK K:TMT10,s:Phosphorylated S DIDO1 245579.9 1 2 153.1 505.54 HUMAN 1 1.4716 9.4279 ETRYSYNTEWRSEII-p Q9BTV4;T149-p ETRYSYNTEWRSEII 0.306383440584975 0.299194645292065 0.146666666666667 0.124 9.61958763346787 6.91895040638459 0.146666666666667 0.124 0.109154397461443 0.203284824598986 1.91568877205518 1.44642333568106 Q9BTV4 TMEM43 Q9BTV4.T149.p_TMEM43 Q9BTV4_T149t _1_1_149_149 Q9BTV4 Q9BTV4 Transmembrane protein 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11950.11950.2 7.64 7.64 5.846 4 1 1 0 714.321 1347.6531 T149t TMT10 145 (R) YSYNtEWR (S) Y(0.0)S(0.0)Y(0.0)NT(0.99)EWR t:Phosphorylated T TMEM43 44931.8 1 1 7119.1 7.64 HUMAN 1 9.6196 6.919 ETSAEPATD______-p P49356;T436-p ETSAEPATD______ 0.860558395251919 0.809572918705456 -0.0283333333333333 0.033 1.27413851200979 1.28585857494712 -0.0283333333333334 0.033 0.745737785588261 0.743728017666918 -0.341296761240341 0.344086661352696 P49356 FNTB P49356.T436.p_FNTB P49356_T436t _1_1_436_436 P49356 B4DL54|P49356|P49356-2 Protein farnesyltransferase subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.34423.34423.4 17.02 12.57 8.665 6 1 1 0 1023.7824 4012.141 T436t TMT10 408 (K) VIQATTYFLQKPVPGFEELKDETSAEPAtD (-) VIQAT(0.0)T(0.0)Y(0.0)FLQKPVPGFEELKDET(0.0)S(0.0)AEPAT(0.99)D K:TMT10,t:Phosphorylated T FNTB 49685.6 2 4 4357.1 32.81 HUMAN 1 -1.2741 1.2859 ETSASPGSPSVRSMS-p Q6ZRS2;S2790-p ETSASPGSPSVRSMS 0.568417101345875 0.524751008969906 0.0833333333333333 -0.0743333333333333 4.51467240960768 3.76238892157927 0.0833333333333333 -0.0743333333333333 0.353616693569719 0.420495263128534 1.0143172859927 -0.871287278317286 Q6ZRS2 SRCAP Q6ZRS2.S2790.p_SRCAP Q6ZRS2_S2790s _1_1_2790_2790 Q6ZRS2 Q6ZRS2|Q6ZRS2-2|Q6ZRS2-3|A0A0A0MS59 Helicase SRCAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17884.17884.4 16.49 16.49 2.273 8 1 1 0 606.5557 2343.2353 S2790s TMT10 2772 (R) GAASTLVPGVSETSASPGsPSVR (S) GAAS(0.0)T(0.0)LVPGVS(0.0)ET(0.0)S(0.0)AS(0.0)PGS(0.99)PS(0.0)VR s:Phosphorylated S SRCAP 345203 1 11 219.1 428.72 HUMAN 1 4.5147 -3.7624 ETSEEGNSVPASQSV-p Q96RL1;S415-p ETSEEGNSVPASQSV 0.256734950293173 0.513498525501199 0.187666666666667 0.0653333333333334 11.2163986501009 3.88392918788631 0.187666666666667 0.0653333333333334 0.075571864113428 0.408890557211391 2.19406475360053 0.894728198524623 Q96RL1 UIMC1 Q96RL1.S415.p_UIMC1 Q96RL1_S415s_1_1_415_415 Q96RL1 Q96RL1|Q96RL1-3 BRCA1-A complex subunit RAP80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25595.25595.4 17.14 17.14 2.31 12 1 1 0 1192.344 4685.3682 N414n S415s TMT10 388 (K) LLLEEEPTTSHGQSSQGIVEETSEEGnsVPASQSVAALTSK (R) LLLEEEPT(0.0)T(0.0)S(0.0)HGQS(0.0)S(0.0)QGIVEET(0.0)S(0.0)EEGN(1.0)S(0.99)VPAS(0.0)QS(0.0)VAALT(0.0)S(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S UIMC1 80924.2 3 11 339.1 354.34 HUMAN 1 11.2164 3.8839 ETSEGLNSDLEMHAD-p P49454;S1964-p ETSEGLNSDLEMHAD 0.685916225851704 0.13379882633283 0.0836666666666667 -0.279333333333333 3.07201354614584 11.5147250262909 0.0836666666666667 -0.279333333333333 0.492945203756857 0.0705549514529645 0.735001487894123 -2.2454764908257 P49454 CENPF P49454.S1964.p_CENPF P49454_S1964s _1_1_1964_1964 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16853.16853.3 22.08 20.19 6.341 3 1 1 0 805.0494 2333.1695 S1964s TMT10 1956 (R) VETSEGLNsDLEMHADK (S) VET(0.0)S(0.0)EGLNS(0.99)DLEMHADK K:TMT10,s:Phosphorylated S CENPF 371067.2 2 23 47.1 771.73 HUMAN 1 3.072 -11.5147 ETSESQDSEKENTKK-p Q92665;S90-p ETSESQDSEKENTKK 0.190735161818506 0.0295567384305579 0.382333333333333 0.299666666666667 14.0689602596516 20.6995916505674 0.382333333333333 0.299666666666667 0.0391835674890963 0.00851218071011872 2.70558851220358 4.0267875281281 Q92665 MRPS31 Q92665.S90.p_MRPS31 Q92665_S90s _1_1_90_90 Q92665 Q92665 28S ribosomal protein S31, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6243.6243.5 11.1 11.1 4.827 8 1 1 0 728.9812 3560.9152 S90s TMT10 77 (R) TEETSKETSESQDsEKENTKK (D) T(0.0)EET(0.0)S(0.0)KET(0.0)S(0.0)ES(0.0)QDS(0.99)EKENT(0.0)KK K:TMT10,s:Phosphorylated S MRPS31 45431.8 2 2 2669.1 74.39 HUMAN 1 14.069 20.6996 ETSIFTPSPCKIPPP-p Q92574;S584-p ETSIFTPSPCKIPPP 0.786231643290655 0.00298089814036961 0.0533333333333333 -0.644666666666667 2.01508609756639 38.0271199072801 0.0533333333333333 -0.644666666666667 0.628769388831686 0.000157502702234703 0.512140378531595 -9.27843555847804 Q92574 TSC1 Q92574.S584.p_TSC1 Q92574_S584s _1_1_584_584 Q92574 Q92574|Q92574-2 Hamartin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26571.26571.5 24.31 25.47 1.221 10 1 1 0 1074.715 5289.5907 S584s TMT10 550 (K) QAFTPIDLPCGSADESPAGDRECQTSLETSIFTPsPCKIPPPTR (V) QAFT(0.0)PIDLPCGS(0.0)ADES(0.0)PAGDRECQT(0.0)S(0.0)LET(0.0)S(0.0)IFT(0.0)PS(0.99)PCKIPPPT(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TSC1 130734.2 1 8 418.1 320.74 HUMAN 1 2.0151 -38.0271 ETSKSFVTPPQSHFV-p P54132;T171-p ETSKSFVTPPQSHFV 0.157927568268785 0.00594025529401107 0.283 -0.816333333333333 16.0818490291331 32.1617205864565 0.283 -0.816333333333333 0.0246498963289036 0.000607894118272638 3.0839219614965 -7.10541977401941 P54132 BLM P54132.T171.p_BLM P54132_T171t _1_1_171_171 P54132 P54132|H0YNU5|H0YLV8 Bloom syndrome protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15122.15122.3 11.2 11.2 3.81 3 1 1 0 570.9568 1630.8903 T171t TMT10 168 (K) SFVtPPQSHFVR (V) S(0.0)FVT(0.99)PPQS(0.0)HFVR t:Phosphorylated T BLM 160709.2 2 7 1140.2 173.27 HUMAN 1 16.0818 -32.1617 ETSLGRLSCVTKRRP-p Q12767-2;S673-p ETSLGRLSCVTKRRP 0.148266672319898 0.0730937661413829 -0.319333333333333 -0.232 16.7711115045453 15.0885168618051 -0.319333333333333 -0.232 0.0210324008153515 0.0309847726462244 -3.2176881688028 -2.8931675351917 Q12767 KIAA0195 Q12767.2.S673.p_KIAA0195 Q12767-2_S673s _1_1_673_673 Q12767-2 Q12767-2|C9JL75|J3QQW3 Isoform 2 of Transmembrane protein 94 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15042.15042.3 9.82 9.82 2.968 4 1 1 0 630.3378 1809.0304 S673s TMT10 666 (K) ETSLGRLsCVTK (R) ET(0.0)S(0.0)LGRLS(0.99)CVT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TMEM94 156822 1 6 1431.1 142.91 HUMAN 1 -16.7711 -15.0885 ETSSVAQSGSESKVE-p P49792;S2566-p ETSSVAQSGSESKVE 0.0983866986781605 0.803586709210602 0.345333333333333 -0.034 21.3184090240936 1.32927795852176 0.345333333333333 -0.034 0.0073817460034181 0.736329506660439 4.16778282380517 -0.354513529878535 P49792 RANBP2 P49792.S2566.p_RANBP2 P49792_S2566s _1_1_2566_2566 P49792 P49792|Q99666|O14715|J3KNE0|A6NKT7|Q7Z3J3|J3KQ37|H7BZ48 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8801.8801.4 21.16 21.16 2.658 8 1 1 0 730.6182 2839.4888 S2566s TMT10 2555 (K) SNNSETSSVAQsGSESKVEPK (K) S(0.0)NNS(0.0)ET(0.0)S(0.0)S(0.0)VAQS(0.99)GS(0.0)ES(0.0)KVEPK K:TMT10,s:Phosphorylated S RANBP2 362585.9 2 57 9.1 1298.62 HUMAN 1 21.3184 -1.3293 ETTKGAYSLSIRDWD-p J3QRU1;S200-p ETTKGAYSLSIRDWD 0.885820345057877 0.0523769786886803 -0.0223333333333333 0.334 1.03759346780736 17.0899268904512 -0.0223333333333333 0.334 0.787482031916893 0.019543723555898 -0.283281950202904 3.27785348167704 J3QRU1 NotFound J3QRU1.S200.p_NotFound J3QRU1_S200s _1_1_200_200 J3QRU1 J3QRU1|P07947 Tyrosine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19790.19790.4 21.77 16.56 2.199 3 1 1 0 683.852 2652.4146 S200s TMT10 197 (K) GAYsLSIRDWDEIRGDNVK (H) GAY(0.0)S(0.99)LS(0.0)IRDWDEIRGDNVK K:TMT10,s:Phosphorylated S YES1 61899.4 1 4 1289.1 157.77 HUMAN 1 -1.0376 17.0899 ETTPQGDSADEKSKK-p O60229-6;S120-p ETTPQGDSADEKSKK 0.931074993503674 0.0965712209027386 -0.0163333333333333 -0.284 0.61382776045288 13.4239268018238 -0.0163333333333334 -0.284 0.868194887209713 0.0454576855187299 -0.173993307018517 -2.5862695836564 O60229 KALRN O60229.6.S120.p_KALRN O60229-6_S120s _1_1_120_120 O60229-6 O60229|O60229-4|O60229-6|O60229-5 Isoform 6 of Kalirin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16977.16977.4 14.74 14.74 2.664 5 1 1 0 787.1337 3065.5518 S120s TMT10 102 (K) SFDLGSPKPGDETTPQGDsADEK (S) S(0.0)FDLGS(0.0)PKPGDET(0.0)T(0.0)PQGDS(0.99)ADEK K:TMT10,s:Phosphorylated S KALRN 143044.5 1 3 450.2 308.79 HUMAN 1 -0.6138 -13.4239 ETTSFFDSDEDDSTS-p Q92997;S192-p ETTSFFDSDEDDSTS 0.67289597353531 0.0215339292274949 0.0916666666666667 0.379333333333333 3.22367518377225 22.7904830651685 0.0916666666666667 0.379333333333333 0.476027981278038 0.00525958760814715 0.765488364155903 4.50009096573458 Q92997 DVL3 Q92997.S192.p_DVL3 Q92997_S192s _1_1_192_192 Q92997 Q92997|Q92997-2 Segment polarity protein dishevelled homolog DVL-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21333.21333.4 29.69 29.69 2.821 14 1 1 0 1025.9423 4020.7726 S192s TMT10 167 (R) RREPGGYDSSSTLMSSELETTSFFDsDEDDSTSR (F) RREPGGY(0.0)DS(0.0)S(0.0)S(0.0)T(0.0)LMS(0.0)S(0.0)ELET(0.0)T(0.0)S(0.0)FFDS(0.99)DEDDS(0.0)T(0.0)S(0.0)R s:Phosphorylated S DVL3 78395.8 1 3 2133.1 96.37 HUMAN 1 3.2237 22.7905 ETVAINLSDVDLSKY-p P25445;S225-p ETVAINLSDVDLSKY 0.96915478726984 0.0526657241444228 0.00866666666666666 0.265 0.265879173056729 17.0564122312403 0.00866666666666667 0.265 0.940615395330074 0.0196951266037614 0.0780207366253101 3.27125093742062 P25445 FAS P25445.S225.p_FAS P25445_S225s _1_1_225_225 P25445 P25445|P25445-6 Tumor necrosis factor receptor superfamily member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25531.25531.4 23.24 18.75 3.284 6 1 1 0 858.9321 3352.7273 S225s TMT10 205 (K) ENQGSHESPTLNPETVAINLsDVDLSK (Y) ENQGS(0.0)HES(0.0)PT(0.0)LNPET(0.0)VAINLS(0.99)DVDLS(0.0)K K:TMT10,s:Phosphorylated S FAS 38929.7 1 2 2875.1 67.59 HUMAN 1 0.2659 17.0564 ETVCLTVSPEEPPPP-p Q6PJ61;S398-p ETVCLTVSPEEPPPP 0.792798769070852 0.0673698167017742 -0.0373333333333333 0.237666666666667 1.94483171277533 15.5858121671019 -0.0373333333333334 0.237666666666667 0.639023498751439 0.0276324112158637 -0.496549667712819 2.98701659748746 Q6PJ61 FBXO46 Q6PJ61.S398.p_FBXO46 Q6PJ61_S398s _1_1_398_398 Q6PJ61 Q6PJ61 F-box only protein 46 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29848.29848.4 15.59 13.9 1.356 3 1 1 0 941.7389 3683.9507 S398s TMT10 387 (K) NVKEETVCLTVsPEEPPPPGQLFFLQNR (G) NVKEET(0.0)VCLT(0.0)VS(0.99)PEEPPPPGQLFFLQNR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S FBXO46 65770.7 1 3 4010.1 39.15 HUMAN 1 -1.9448 15.5858 ETVELDVSDEEMARR-p Q99547;S110-p ETVELDVSDEEMARR 0.298291057314039 0.406973781435761 0.174 0.0783333333333334 9.87616956959301 5.19635338029233 0.174 0.0783333333333334 0.102892339736127 0.302248853370919 1.96020469880857 1.13968407700042 Q99547 MPHOSPH6 Q99547.S110.p_MPHOSPH6 Q99547_S110s _1_1_110_110 Q99547 Q99547|H3BNT4|H3BSB3 M-phase phosphoprotein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24987.24987.5 24.2 18.34 3.669 5 1 1 0 909.8604 4465.3012 S110s TMT10 95 (K) HKAEEVEDETVELDVsDEEMARRYETLVGTIGK (K) HKAEEVEDET(0.0)VELDVS(0.99)DEEMARRY(0.0)ET(0.0)LVGT(0.0)IGK K:TMT10,s:Phosphorylated S MPHOSPH6 19080.4 9 1 1854.1 110.97 HUMAN 1 9.8762 5.1964 ETVGTPDSGRGRSEK-p O43581-3;S61-p ETVGTPDSGRGRSEK 0.221650795067904 0.0456048895281597 0.336666666666667 -0.3 12.5951017385252 17.94610677439 0.336666666666667 -0.3 0.0550161032198755 0.0160468326172787 2.4383559427227 -3.44855396634586 O43581 SYT7 O43581.3.S61.p_SYT7 O43581-3_T58tS61s_2_2_58_61 O43581-3 O43581-3|O43581-4|O43581-5|O43581-2|O43581-6 Isoform 3 of Synaptotagmin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10129.10129.3 10.8 10.8 4.895 5 2 2 0 819.0648 2295.2457 T58t S61s TMT10 49 (R) YKNSLETVGtPDsGRGR (S) Y(0.0)KNS(0.0)LET(0.0)VGT(0.99)PDS(0.99)GRGR K:TMT10,t:Phosphorylated T,s:Phosphorylated S SYT7 76194.9 5 6 1782.1 115.27 HUMAN 1 12.5951 -17.9461 ETVQTTQSPTPVEKE-p A0A0A0MT33;S695-p ETVQTTQSPTPVEKE 0.535204694146268 0.0045642445280084 -0.0913333333333333 -1.01566666666667 5.024660632325 34.2830118506852 -0.0913333333333333 -1.01566666666667 0.31443721191125 0.000372991396961589 -1.10857539301453 -7.83395994979793 A0A0A0MT33 SCAF8 A0A0A0MT33.S695.p_SCAF8 A0A0A0MT33_S695s _1_1_695_695 A0A0A0MT33 A0A0A0MT33|Q9UPN6-2 Protein SCAF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12445.12445.3 18.86 18.86 1.954 7 1 1 0 980.525 2859.5918 S695s TMT10 682 (K) SSEPVKETVQTTQsPTPVEK (E) S(0.0)S(0.0)EPVKET(0.0)VQT(0.0)T(0.0)QS(0.99)PT(0.0)PVEK K:TMT10,s:Phosphorylated S SCAF8 149312.7 5 4 2085.1 98.15 HUMAN 1 -5.0247 -34.283 ETVSRAGSSLQKKRK-p O60231;S116-p ETVSRAGSSLQKKRK 0.549826938823893 0.730658381981859 0.118666666666667 0.08 4.79195898760342 1.87847263193777 0.118666666666667 0.08 0.331744782496107 0.648862591581459 1.06579186402271 0.481662810567535 O60231 DHX16 O60231.S116.p_DHX16 O60231_S116s _1_1_116_116 O60231 O60231 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5226.5226.3 9.25 4.48 1.72 2 1 1 0 452.9269 1276.7989 S116s Hydrogen 114 (R) AGsSLQKK (R) AGS(0.99)S(0.0)LQKK K:TMT10-Lys-Only,s:Phosphorylated S DHX16 119946.1 1 2 2216.1 93.19 HUMAN 1 4.792 1.8785 ETVSRTDSPSKIIKL-p O95049-3;S673-p ETVSRTDSPSKIIKL 0.363920347814779 0.966504145237237 -0.127 0.00866666666666669 8.14800136894801 0.209815944302223 -0.127 0.00866666666666673 0.153179223305416 0.952836544752913 -1.66082555691858 0.0619311627270846 O95049 TJP3 O95049.3.S673.p_TJP3 O95049-3_S673s_1_1_673_673 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21502.21502.3 10.87 10.87 1.846 6 1 1 0 1036.1731 3010.5443 M658m S673s TMT10 654 (K) LTAEmPDQFEIAETVSRTDsPSK (I) LT(0.0)AEM(1.0)PDQFEIAET(0.0)VS(0.0)RT(0.0)DS(0.99)PS(0.0)K K:TMT10,m:Oxidized methionine,s:Phosphorylated S TJP3 103593.6 4 16 125.1 544.41 HUMAN 1 -8.148 0.2098 ETVVENATPDYAAGL-p A0A0C4DFX9;T308-p ETVVENATPDYAAGL 0.87289946291738 0.093399409761647 0.037 -0.228333333333333 1.15587582645579 13.6179440730294 0.037 -0.228333333333333 0.766323982707635 0.0434715967694977 0.312533819283991 -2.62151527510703 A0A0C4DFX9 NELFA A0A0C4DFX9.T308.p_NELFA A0A0C4DFX9_T308t _1_1_308_308 A0A0C4DFX9 A0A0C4DFX9|Q9H3P2|Q9H3P2-7 Negative elongation factor A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23154.23154.5 17.33 14.44 5.869 6 1 1 0 900.6846 4419.4316 T308t TMT10 288 (K) TLDAEVVEKPAKEETVVENAtPDYAAGLVSTQK (L) T(0.0)LDAEVVEKPAKEET(0.0)VVENAT(0.99)PDY(0.0)AAGLVS(0.0)T(0.0)QK K:TMT10,t:Phosphorylated T NELFA 58726.5 1 6 1015.1 188.17 HUMAN 1 1.1559 -13.6179 ETYQKEISPYENKMG-p Q8NG31;S1773-p ETYQKEISPYENKMG 0.114688242267433 0.0016939373039229 -0.361333333333333 -0.951 19.5721859149892 44.0210204967969 -0.361333333333333 -0.951 0.0110352304877729 3.96184928546618e-05 -3.78773245395881 -12.0967054025284 Q8NG31 CASC5 Q8NG31.S1773.p_CASC5 Q8NG31_S1773s _1_1_1773_1773 Q8NG31 Q8NG31 Kinetochore scaffold 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12413.12413.2 12.62 5.09 5.622 2 1 1 0 759.3864 1437.799 S1773s TMT10 1771 (K) EIsPYENK (M) EIS(0.99)PY(0.0)ENK K:TMT10,s:Phosphorylated S KNL1 268353.4 1 14 650.1 254.2 HUMAN 1 -19.5722 -44.021 ETYTFENSVNMLPSS-p Q03188;S189-p ETYTFENSVNMLPSS 0.537446669824481 0.0432981575103132 0.126666666666667 -0.785 4.98441539057742 18.2681328950516 0.126666666666667 -0.785 0.317364584365813 0.0149000151672054 1.1012013580933 -3.51380406962953 Q03188 CENPC Q03188.S189.p_CENPC Q03188_S189s _1_1_189_189 Q03188 Q03188|Q03188-2 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25145.25145.3 15.65 15.65 3.718 8 1 1 0 967.4749 2820.4377 S189s TMT10 182 (R) ETYTFENsVNMLPSSTEVSVK (T) ET(0.0)Y(0.0)T(0.0)FENS(0.99)VNMLPS(0.0)S(0.0)T(0.0)EVS(0.0)VK K:TMT10,s:Phosphorylated S CENPC 107459.5 1 11 209.1 442.77 HUMAN 1 4.9844 -18.2681 ETYYLSDSPLLGPPV-p Q9NYZ3;S152-p ETYYLSDSPLLGPPV 0.427414948238645 0.654976908619292 0.117333333333333 -0.0483333333333333 6.79735381876325 2.51235790283851 0.117333333333333 -0.0483333333333333 0.209056953890159 0.560743450504966 1.42549233335509 -0.619419514417152 Q9NYZ3 GTSE1 Q9NYZ3.S152.p_GTSE1 Q9NYZ3_S152s _1_1_152_152 Q9NYZ3 Q9NYZ3 G2 and S phase-expressed protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26174.26174.3 16.61 16.61 2.234 5 1 1 0 800.3957 2319.207 S152s TMT10 145 (R) ETYYLSDsPLLGPPVGEPR (L) ET(0.0)Y(0.0)Y(0.0)LS(0.0)DS(0.99)PLLGPPVGEPR s:Phosphorylated S GTSE1 77156.9 2 3 271.1 394.28 HUMAN 1 6.7974 -2.5124 EVAAGGGSWDDRLRR-p Q66K74;S321-p EVAAGGGSWDDRLRR 0.509638221387868 0.0939358726924402 0.103333333333333 -0.237333333333333 5.40628809418682 13.5853112281225 0.103333333333333 -0.237333333333333 0.28798587723974 0.0437994722063381 1.17801892907734 -2.61557813137192 Q66K74 MAP1S Q66K74.S321.p_MAP1S Q66K74_S321s _1_1_321_321 Q66K74 Q66K74|Q66K74-2 Microtubule-associated protein 1S HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12895.12895.3 12.07 12.07 6.211 2 1 1 0 628.965 1804.9139 S321s TMT10 313 (R) SEVAAGGGsWDDRLR (R) S(0.0)EVAAGGGS(0.99)WDDRLR s:Phosphorylated S MAP1S 113179.3 1 1 456.1 307.14 HUMAN 1 5.4063 -13.5853 EVAEEAQSGGD____-p O76070;S124-p EVAEEAQSGGD____ 0.546937123472764 0.0480248023052339 -0.150666666666667 0.365 4.83676481325835 17.6353438574499 -0.150666666666667 0.365 0.328339791958288 0.0172371560853797 -1.07405773880453 3.38613663016916 O76070 SNCG O76070.S124.p_SNCG O76070_S124s _1_1_124_124 O76070 O76070 Gamma-synuclein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8565.8565.2 19.58 19.58 99 1 1 1 0 1008.467 1935.9548 S124s TMT10 114 (K) EKEEVAEEAQsGGD (-) EKEEVAEEAQS(1.0)GGD K:TMT10,s:Phosphorylated S SNCG 13330.6 7 7 1321.1 154.3 HUMAN 1 -4.8368 17.6353 EVAEVGFSSNDDEDK-p Q9Y4B4;S1450-p EVAEVGFSSNDDEDK 0.698972630688095 0.890072423949469 0.056 0.0163333333333334 2.92275396134243 0.709524944933625 0.056 0.0163333333333334 0.510181379614675 0.84927336812338 0.704678607986731 0.199320940850307 Q9Y4B4 RAD54L2 Q9Y4B4.S1450.p_RAD54L2 Q9Y4B4_S1450sS1451s_2_2_1450_1451 Q9Y4B4 Q9Y4B4 Helicase ARIP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25683.25683.4 21.55 21.55 6.801 5 2 2 0 1139.2708 4394.1403 S1450s S1451s TMT10 1434 (R) SQVPPFDSHEVAEVGFssNDDEDKDDDVIEVTGK (-) S(0.0)QVPPFDS(0.0)HEVAEVGFS(0.99)S(0.99)NDDEDKDDDVIEVT(0.0)GK K:TMT10,s:Phosphorylated S RAD54L2 164135.1 2 8 1338.1 152.26 HUMAN 1 2.9228 0.7095 EVAIRQLSESSKLKL-p Q9Y426;S497-p EVAIRQLSESSKLKL 0.0635108641161859 0.39442225053662 0.407333333333333 0.103666666666667 26.0087216705009 5.37046457697492 0.407333333333333 0.103666666666667 0.00250684702545491 0.290371201963994 5.30387592705575 1.17128333905702 Q9Y426 C2CD2 Q9Y426.S497.p_C2CD2 Q9Y426_S497s _1_1_497_497 Q9Y426 Q9Y426|Q9Y426-3|Q9Y426-2 C2 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7517.7517.2 11.29 4.19 2.167 3 1 1 0 658.8465 1236.72 S497s TMT10 495 (R) QLsESSK (L) QLS(0.99)ES(0.0)S(0.0)K K:TMT10,s:Phosphorylated S C2CD2 76045.3 5 4 1354.1 150.76 HUMAN 1 26.0087 5.3705 EVALRSDSEGSDYTP-p F5GWX5;S98-p EVALRSDSEGSDYTP 0.587712759915442 0.0144671845653115 0.0746666666666667 0.357 4.24979184881957 25.4976321892469 0.0746666666666667 0.357 0.37585541807342 0.00281991995676594 0.964586431428087 5.1643123375738 F5GWX5 CHD4 F5GWX5.S98.p_CHD4 F5GWX5_S96sS98sS101s_3_3_96_101 F5GWX5 F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24737.24737.4 15.04 15.04 3.584 7 3 3 0 1172.2712 4446.1563 S96s S98s S101s TMT10 74 (K) ELGDSSGEGPEFVEEEEEVALRsDsEGsDYTPGKK (K) ELGDS(0.0)S(0.0)GEGPEFVEEEEEVALRS(0.99)DS(0.99)EGS(0.99)DY(0.0)T(0.0)PGKK K:TMT10,s:Phosphorylated S CHD4 218583 6 34 49.1 753.68 HUMAN 1 4.2498 25.4976 EVANLACSISNNEEG-p P35221;S439-p EVANLACSISNNEEG 0.814137925555095 0.0660071503440806 -0.0396666666666667 0.348666666666667 1.71588174600271 15.7028578242172 -0.0396666666666667 0.348666666666667 0.673615117831954 0.0268976425343044 -0.444920388010297 3.00926397368538 P35221 CTNNA1 P35221.S439.p_CTNNA1 P35221_S439s _1_1_439_439 P35221 P35221-2|G3XAM7|P35221-3 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28989.28989.4 22.68 19.01 1.593 2 1 1 0 650.3362 2518.3587 S439s TMT10 430 (K) LIEVANLACsISNNEEGVK (L) LIEVANLACS(0.99)IS(0.0)NNEEGVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CTNNA1 100754.2 3 10 169.1 491.55 HUMAN 1 -1.7159 15.7029 EVAPDAKSFVLNLGK-p P09382;S30-p EVAPDAKSFVLNLGK 0.185220024211789 0.836889042243555 0.253 -0.0263333333333333 14.3981445671072 1.0861543997873 0.253 -0.0263333333333333 0.0363233205461427 0.778725793646163 2.76631624491896 -0.295322452647576 P09382 LGALS1 P09382.S30.p_LGALS1 P09382_S30s _1_1_30_30 P09382 P09382 Galectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26400.26400.3 13.13 13.13 99 1 1 1 0 728.4 2103.2214 S30s Hydrogen 22 (R) GEVAPDAKsFVLNLGK (D) GEVAPDAKS(1.0)FVLNLGK K:TMT10-Lys-Only,s:Phosphorylated S LGALS1 15057.8 7 1 3146.1 59.28 HUMAN 1 14.3981 -1.0862 EVAPRAVSVGSQPSV-p Q16825;S670-p EVAPRAVSVGSQPSV 0.918963678081157 0.246578258392095 -0.0183333333333333 -0.130666666666667 0.715496081139959 8.0123199576513 -0.0183333333333333 -0.130666666666667 0.848106500339629 0.158040357796689 -0.200907731700886 -1.63677809884927 Q16825 PTPN21 Q16825.S670.p_PTPN21 Q16825_S670s _1_1_670_670 Q16825 Q16825 Tyrosine-protein phosphatase non-receptor type 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17577.17577.2 12.51 12.51 1.301 4 1 1 0 886.9449 1692.9118 S670s TMT10 668 (R) AVsVGSQPSVFTER (T) AVS(0.99)VGS(0.0)QPS(0.0)VFT(0.0)ER s:Phosphorylated S PTPN21 134191.5 2 9 762.1 229.75 HUMAN 1 -0.7155 -8.0123 EVDEGFCSPKPSEIK-p Q9UHV7;S890-p EVDEGFCSPKPSEIK 0.488088514771249 0.109704646782665 -0.163333333333333 0.247 5.7375588389535 12.676727992861 -0.163333333333333 0.247 0.266835812210083 0.0539917247014772 -1.23766733714889 2.45166960726003 Q9UHV7 MED13 Q9UHV7.S890.p_MED13 Q9UHV7_S890s _1_1_890_890 Q9UHV7 Q9UHV7 Mediator of RNA polymerase II transcription subunit 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20039.20039.4 19.6 19.6 7.91 2 1 1 0 651.3414 2522.3779 S890s TMT10 882 (K) IEVDEGFCsPKPSEIK (D) IEVDEGFCS(0.99)PKPS(0.0)EIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MED13 242830 6 5 1738.1 118.41 HUMAN 1 -5.7376 12.6767 EVDKQSGSPESRVEN-p Q8NI08-2;S491-p EVDKQSGSPESRVEN 0.259441883712572 0.206132083422677 -0.382333333333333 -0.163 11.1184256195817 9.02564580334463 -0.382333333333334 -0.163 0.077296074378027 0.125151315704084 -2.17686959515821 -1.81214856189853 Q8NI08 NCOA7 Q8NI08.2.S491.p_NCOA7 Q8NI08-2_S491s _1_1_491_491 Q8NI08-2 Q8NI08|Q8NI08-2|Q8NI08-7 Isoform 2 of Nuclear receptor coactivator 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14173.14173.3 20.25 15.14 2.202 3 1 1 0 814.3982 2361.212 S491s TMT10 479 (K) QDIMPEVDKQSGsPESR (V) QDIMPEVDKQS(0.0)GS(0.99)PES(0.0)R K:TMT10,s:Phosphorylated S NCOA7 105415.6 3 8 906.1 202.52 HUMAN 1 -11.1184 -9.0256 EVDMALGSPEMDVRK-p O15446-2;S207-p EVDMALGSPEMDVRK 0.69528556416086 0.908676582662813 0.0706666666666667 0.0143333333333333 2.96301306931776 0.583197476365545 0.0706666666666667 0.0143333333333334 0.505473850224122 0.874339808887049 0.712889772545763 0.165775392305933 O15446 CD3EAP O15446.2.S207.p_CD3EAP O15446-2_S207s_1_1_207_207 O15446-2 O15446-2 Isoform 2 of DNA-directed RNA polymerase I subunit RPA34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26622.26622.4 16.2 16.2 4.513 3 1 1 0 980.9539 3839.8451 N194n S207s TMT10 180 (K) EMQVTEAPVTQEAVnGHGALEVDMALGsPEMDVR (K) EMQVT(0.0)EAPVT(0.0)QEAVN(1.0)GHGALEVDMALGS(0.99)PEMDVR n:Deamidated,s:Phosphorylated S CD3EAP 55456.1 3 5 1198.1 167.21 HUMAN 1 2.963 0.5832 EVDNDVDSPGSLRRG-p Q96DR7;S304-p EVDNDVDSPGSLRRG 0.266067952192961 0.74175303545199 0.173 0.0353333333333334 10.8992382005807 1.78826410621151 0.173 0.0353333333333334 0.0812973107919822 0.66248124740252 2.13846589600261 0.46133217220902 Q96DR7 ARHGEF26 Q96DR7.S304.p_ARHGEF26 Q96DR7_S304s _1_1_304_304 Q96DR7 Q96DR7|Q96DR7-4|Q96DR7-3 Rho guanine nucleotide exchange factor 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18075.18075.4 24.14 24.14 3.105 4 1 1 0 869.6577 3395.6335 S304s TMT10 280 (R) SMVEGLGGPLGHAGEESEVDNDVDsPGSLRR (G) S(0.0)MVEGLGGPLGHAGEES(0.0)EVDNDVDS(0.99)PGS(0.0)LRR s:Phosphorylated S ARHGEF26 97914.4 2 8 478.1 300.31 HUMAN 1 10.8992 1.7883 EVDRRVESEESGDEE-p Q15435;S24-p EVDRRVESEESGDEE 0.542372586497903 0.00490952299038418 -0.125666666666667 0.533333333333333 4.90276302071417 33.6913471913162 -0.125666666666667 0.533333333333333 0.323387849198088 0.000427430275745296 -1.08620842601847 7.62465368310471 Q15435 PPP1R7 Q15435.S24.p_PPP1R7 Q15435_S24s _1_1_24_24 Q15435 Q15435|Q15435-3|B5MBZ8 Protein phosphatase 1 regulatory subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4600.4600.3 12.95 12.95 3.309 2 1 1 0 706.3445 2037.05 S24s Hydrogen 21 (R) RVEsEESGDEEGKK (H) RVES(0.99)EES(0.0)GDEEGKK K:TMT10-Lys-Only,s:Phosphorylated S PPP1R7 41677.6 12 2 1222.1 164.72 HUMAN 1 -4.9028 33.6913 EVDRSCDSDEDYEAS-p Q8IVE3;S869-p EVDRSCDSDEDYEAS 0.670942826613126 0.740657160494163 -0.0763333333333334 0.0443333333333333 3.24652947179668 1.79751919783549 -0.0763333333333334 0.0443333333333333 0.473529514072288 0.661070960968759 -0.770055461853678 0.463427312715618 Q8IVE3 PLEKHH2 Q8IVE3.S869.p_PLEKHH2 Q8IVE3_S869s _1_1_869_869 Q8IVE3 Q8IVE3|Q8IVE3-2 Pleckstrin homology domain-containing family H member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19353.19353.4 18.3 18.3 1.767 4 1 1 0 846.637 3303.5476 S869s TMT10 855 (K) LWEAKVEEVDRSCDsDEDYEASGR (S) LWEAKVEEVDRS(0.0)CDS(0.99)DEDY(0.0)EAS(0.0)GR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PLEKHH2 169823.9 2 1 981.2 192.43 HUMAN 1 -3.2465 1.7975 EVEALKKSADWVSDW-p O60238;S137-p EVEALKKSADWVSDW 0.500373865046061 0.00331299083463273 0.0996666666666667 1.04033333333333 5.54390498916886 37.1345779197653 0.0996666666666667 1.04033333333333 0.279003403446122 0.000193438184734684 1.20286396169667 8.91427400186225 O60238 BNIP3L O60238.S137.p_BNIP3L O60238_S137s _1_1_137_137 O60238 O60238|O60238-2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22470.22470.3 15.04 15.04 4.498 4 1 1 0 870.4322 2529.3138 S137s TMT10 137 (K) sADWVSDWSSRPENIPPK (E) S(0.99)ADWVS(0.0)DWS(0.0)S(0.0)RPENIPPK K:TMT10,s:Phosphorylated S BNIP3L 24044.1 2 3 2458.1 82.41 HUMAN 1 5.5439 37.1346 EVEDGLGSPKPEEIK-p Q71F56;S923-p EVEDGLGSPKPEEIK 0.327770976645339 0.0508531743164095 -0.432666666666667 0.413333333333333 9.05939470018499 17.2776889621932 -0.432666666666667 0.413333333333333 0.124182537548095 0.018716778628088 -1.81864502098702 3.31495199253514 Q71F56 MED13L Q71F56.S923.p_MED13L Q71F56_S923s _1_1_923_923 Q71F56 Q71F56 Mediator of RNA polymerase II transcription subunit 13-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18887.18887.4 18.13 18.13 99 1 1 1 0 632.0845 2445.3514 S923s TMT10 915 (K) MEVEDGLGsPKPEEIK (D) MEVEDGLGS(1.0)PKPEEIK K:TMT10,s:Phosphorylated S MED13L 245507 5 11 415.1 321.44 HUMAN 1 -9.0594 17.2777 EVEEEDGSESEESAG-p P06401;S227-p EVEEEDGSESEESAG 0.136612173080343 0.00193275910098377 0.297333333333333 0.833 17.7298296932443 42.533932592244 0.297333333333333 0.833 0.0168661916415354 5.57964721702257e-05 3.40779298811841 11.3319652862645 P06401 PGR P06401.S227.p_PGR P06401_S227s_1_1_227_227 P06401 A0A087WXR4|P06401|P06401-5|Q8NG42|P06401-2|Q8NG44|Q8NG45 Progesterone receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28396.28396.4 25.19 25.19 1.147 7 1 1 0 1351.6814 5340.7731 Q194q S227s TMT10 194 (R) qLLLPASESPHWSGAPVKPSPQAAAVEVEEEDGsESEESAGPLLK (G) Q(1.0)LLLPAS(0.0)ES(0.0)PHWS(0.0)GAPVKPS(0.0)PQAAAVEVEEEDGS(0.99)ES(0.0)EES(0.0)AGPLLK K:TMT10,q:Pyroglutamic acid,s:Phosphorylated S PGR 100348.6 10 8 260.1 397.57 HUMAN 1 17.7298 42.5339 EVEEKRASPPVSPIP-p Q2M2Z5;S317-p EVEEKRASPPVSPIP 0.158807316821779 0.949256215953709 0.257333333333333 -0.00766666666666665 16.0082208071738 0.324137690446667 0.257333333333333 -0.00766666666666663 0.0250713615188844 0.928081746281597 3.06976892384861 -0.0945321008705854 Q2M2Z5 KIZ Q2M2Z5.S317.p_KIZ Q2M2Z5_S317s _1_1_317_317 Q2M2Z5 Q2M2Z5|Q2M2Z5-4 Centrosomal protein kizuna HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17125.17125.3 17.68 17.68 2.216 5 1 1 0 928.7951 2704.4016 S317s TMT10 315 (K) RAsPPVSPIPVSEYCESENK (W) RAS(0.99)PPVS(0.0)PIPVS(0.0)EY(0.0)CES(0.0)ENK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIZ 75794.3 2 2 2276.1 90.11 HUMAN 1 16.0082 -0.3241 EVEKEAVSPRSEELS-p O95382;S1129-p EVEKEAVSPRSEELS 0.125743941781331 0.00259997565261951 0.668333333333333 -0.937333333333333 18.7076788309811 39.3897809097975 0.668333333333333 -0.937333333333333 0.0134657986684481 0.000115085844527729 3.60692891031726 -9.86024961628903 O95382 MAP3K6 O95382.S1129.p_MAP3K6 O95382_S1129s _1_1_1129_1129 O95382 O95382|O95382-3 Mitogen-activated protein kinase kinase kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21868.21868.3 13.83 13.83 99 1 1 1 0 787.4386 2280.3328 S1129s TMT10 1114 (R) AALGVLGPEVEKEAVsPR (S) AALGVLGPEVEKEAVS(1.0)PR K:TMT10,s:Phosphorylated S MAP3K6 144305.1 1 3 3537.1 48.8 HUMAN 1 18.7077 -39.3898 EVEKPDASPTSLQLR-p O94885;S101-p EVEKPDASPTSLQLR 0.538483660338755 0.0292918931164772 0.120333333333333 -0.3 4.97023307724307 20.7532594809265 0.120333333333333 -0.3 0.318402663674006 0.00840763891968255 1.09860031275858 -4.03854334882674 O94885 SASH1 O94885.S101.p_SASH1 O94885_S101s _1_1_101_101 O94885 O94885 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20401.20401.4 18.73 15.89 2.264 4 1 1 0 688.3644 2670.4714 S101s TMT10 89 (R) VSQDLEVEKPDAsPTSLQLR (S) VS(0.0)QDLEVEKPDAS(0.99)PT(0.0)S(0.0)LQLR K:TMT10,s:Phosphorylated S SASH1 137734.8 2 2 295.1 379.69 HUMAN 1 4.9702 -20.7533 EVEMEVESDEEDDKQ-p Q15459;S329-p EVEMEVESDEEDDKQ 0.209850580534842 0.0616712314732594 -0.281 0.501 13.0868001250478 16.1074066642017 -0.281 0.501 0.0491269709590972 0.0245052610639927 -2.52671966961948 3.08664155568228 Q15459 SF3A1 Q15459.S329.p_SF3A1 Q15459_S329s _1_1_329_329 Q15459 Q15459|Q15459-2 Splicing factor 3A subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19594.19594.3 22.23 22.23 8.305 2 1 1 0 1128.8434 3304.5506 S329s TMT10 317 (K) FGESEEVEMEVEsDEEDDKQEK (A) FGES(0.0)EEVEMEVES(0.99)DEEDDKQEK K:TMT10,s:Phosphorylated S SF3A1 88941.6 11 2 1612.1 127.6 HUMAN 1 -13.0868 16.1074 EVENRSESPIPVAEQ-p P86452;S381-p EVENRSESPIPVAEQ 0.733222381091121 0.233743900139828 0.0503333333333333 0.321 2.55077343974307 8.31296209923461 0.0503333333333333 0.321 0.555805264494714 0.147470037293262 0.627593084373796 1.68885471824086 P86452 ZBED6 P86452.S381.p_ZBED6 P86452_S381s _1_1_381_381 P86452 P86452 Zinc finger BED domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18594.18594.2 11.58 6.29 3.354 3 1 1 0 962.4774 1843.9785 S381s TMT10 379 (R) SEsPIPVAEQGTLMR (A) S(0.0)ES(0.99)PIPVAEQGT(0.0)LMR s:Phosphorylated S ZBED6 111454.3 2 3 3572.1 47.99 HUMAN 1 2.5508 8.313 EVEPGMPSPTTLKKS-p Q12857-2;S319-p EVEPGMPSPTTLKKS 0.338038342621858 0.845302961949208 0.188333333333333 -0.0203333333333333 8.76989885062942 1.02642397202574 0.188333333333333 -0.0203333333333333 0.132742537377474 0.789509941113907 1.7685321036973 -0.280465807872713 Q12857 NFIA Q12857.2.S319.p_NFIA Q12857-2_S319s _1_1_319_319 Q12857-2 Q12857-4|B1AKN8|Q12857-3|Q12857-2|B1AKN5 Isoform 2 of Nuclear factor 1 A-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18854.18854.4 14.26 14.26 3.054 8 1 1 0 770.3683 2998.4981 S319s TMT10 300 (R) SPGSGSQSSGWHEVEPGMPsPTTLK (K) S(0.0)PGS(0.0)GS(0.0)QS(0.0)S(0.0)GWHEVEPGMPS(0.99)PT(0.0)T(0.0)LK K:TMT10,s:Phosphorylated S NFIA 55018.3 1 10 555.1 273.2 HUMAN 1 8.7699 -1.0264 EVEREGESPAAGPPP-p Q8IZL8;S1043-p EVEREGESPAAGPPP 0.0796409010099057 0.0994199807847619 -0.597 0.472333333333333 23.4648584530575 13.2479803694802 -0.597 0.472333333333333 0.00450312657813766 0.0473371343026535 -4.66518750104081 2.55441556709861 Q8IZL8 PELP1 Q8IZL8.S1043.p_PELP1 Q8IZL8_S1043s _1_1_1043_1043 Q8IZL8 C9JFV4|Q8IZL8|E7EV54 Proline-, glutamic acid- and leucine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26492.26492.4 16.51 16.51 4.393 5 1 1 0 1075.5077 4219.0342 S1043s TMT10 1040 (R) EGEsPAAGPPPQELVEEEPSAPPTLLEEETEDGSDK (V) EGES(0.99)PAAGPPPQELVEEEPS(0.0)APPT(0.0)LLEEET(0.0)EDGS(0.0)DK K:TMT10,s:Phosphorylated S PELP1 120952.6 1 6 911.1 201.81 HUMAN 1 -23.4649 13.248 EVERRIVSQLLTLMD-p P55072;S326-p EVERRIVSQLLTLMD 0.691310392703045 0.235718493770492 -0.0846666666666667 0.152666666666667 3.00667430503373 8.26406250198462 -0.0846666666666667 0.152666666666667 0.500417592853785 0.149139866430634 -0.721767599302363 1.68038880657075 P55072 VCP P55072.S326.p_VCP P55072_S326s _1_1_326_326 P55072 P55072 Transitional endoplasmic reticulum ATPase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.38381.38381.3 12.51 11.09 4.266 2 1 1 0 657.045 1889.1546 S326s TMT10 324 (R) IVsQLLTLMDGLK (Q) IVS(0.99)QLLT(0.0)LMDGLK K:TMT10,s:Phosphorylated S VCP 90004.9 1 7 803.1 222.64 HUMAN 1 -3.0067 8.2641 EVESTSNSPSSSSLQ-p Q04656-3;S438-p EVESTSNSPSSSSLQ 0.955933195191128 0.135865093863222 0.0103333333333333 0.174333333333333 0.382263962683388 11.4235612115107 0.0103333333333333 0.174333333333333 0.915742991899074 0.0720516413957734 0.110833829610649 2.22943718784713 Q04656 ATP7A Q04656.3.S438.p_ATP7A Q04656-3_S438s _1_1_438_438 Q04656-3 Q04656-3|Q04656-2|Q04656-5 Isoform 2 of Copper-transporting ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18182.18182.3 24.92 24.92 1.145 11 1 1 0 898.1152 2612.3667 S438s TMT10 426 (R) VSITSEVESTSNsPSSSSLQK (I) VS(0.0)IT(0.0)S(0.0)EVES(0.0)T(0.0)S(0.0)NS(0.99)PS(0.0)S(0.0)S(0.0)S(0.0)LQK K:TMT10,s:Phosphorylated S ATP7A 173615 4 4 1241.1 162.93 HUMAN 1 0.3823 11.4236 EVETSVISIDSPQKL-p Q12888-2;S729-p EVETSVISIDSPQKL 0.704371473235441 0.0369181497054097 0.0556666666666667 0.293666666666667 2.86234924604093 19.2632874995434 0.0556666666666667 0.293666666666667 0.517326916587444 0.0118487149081576 0.692312464142208 3.71927950263686 Q12888 TP53BP1 Q12888.2.S729.p_TP53BP1 Q12888-2_S729s _1_1_729_729 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23839.23839.2 23.8 23.8 1.147 5 1 1 0 1389.1528 2697.3363 S729s TMT10 716 (K) ECSEAMEVETSVIsIDSPQK (L) ECS(0.0)EAMEVET(0.0)S(0.0)VIS(0.99)IDS(0.0)PQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TP53BP1 216167.2 19 32 3.1 2297.07 HUMAN 1 2.8623 19.2633 EVETYRRSKEITVRG-p P17844;S79-p EVETYRRSKEITVRG 0.167787448802573 0.00516936097998708 0.300666666666667 -0.935666666666667 15.484463192484 33.2685472227041 0.300666666666667 -0.935666666666667 0.028284837027508 0.000471134901417941 2.96981614419245 -7.47802744996483 P17844 DDX5 P17844.S79.p_DDX5 P17844_S79s _1_1_79_79 P17844 P17844|J3KTA4|P17844-2|J3QR02 Probable ATP-dependent RNA helicase DDX5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8029.8029.3 9.21 2.61 2.8 2 1 1 0 457.5982 1290.8146 S79s TMT10 79 (R) sKEITVR (G) S(0.99)KEIT(0.0)VR K:TMT10,s:Phosphorylated S DDX5 69660.3 2 10 2075.1 99 HUMAN 1 15.4845 -33.2685 EVFSSCSSEVVLSGD-p Q09666;S110-p EVFSSCSSEVVLSGD 0.194002306690035 0.0420276623893229 0.277333333333333 0.342666666666667 13.8889119402711 18.4476582915366 0.277333333333333 0.342666666666667 0.0408421697450442 0.0142966462345634 2.67254511508621 3.55043787885188 Q09666 AHNAK Q09666.S110.p_AHNAK Q09666_S110s _1_1_110_110 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20114.20114.3 15.1 15.1 1.22 6 1 1 0 911.0634 2651.198 S110s TMT10 103 (R) EVFSSCSsEVVLSGDDEEYQR (I) EVFS(0.0)S(0.0)CS(0.0)S(0.99)EVVLS(0.0)GDDEEY(0.0)QR C:Carbamidomethylation,s:Phosphorylated S AHNAK 629603.7 1 4 1.1 4313.36 HUMAN 1 13.8889 18.4477 EVGAGYNSEDEYEAA-p Q96G74;S177-p EVGAGYNSEDEYEAA 0.247048592039774 0.930980441078259 0.251333333333333 -0.011 11.6057893171958 0.436942887003055 0.251333333333333 -0.011 0.0690909347291461 0.904285800273277 2.26260136213399 -0.125982186439899 Q96G74 OTUD5 Q96G74.S177.p_OTUD5 Q96G74_S177s_1_1_177_177 Q96G74 Q96G74|Q96G74-5|Q96G74-3|Q96G74-2|A0A087WXV6 OTU domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14171.14171.4 24.12 24.12 1.564 4 1 1 0 915.9154 3579.6785 N176n S177s TMT10 154 (R) QAPGVGAVGGGSPEREEVGAGYnsEDEYEAAAAR (I) QAPGVGAVGGGS(0.0)PEREEVGAGY(0.0)N(1.0)S(0.99)EDEY(0.0)EAAAAR n:Deamidated,s:Phosphorylated S OTUD5 61138.2 5 2 946.1 197.26 HUMAN 1 11.6058 -0.4369 EVGHERDSLQRQLNT-p Q13136;S77-p EVGHERDSLQRQLNT 0.198733336721893 0.820951185808648 -0.219666666666667 -0.0296666666666667 13.6601502716884 1.19830698107419 -0.219666666666667 -0.0296666666666666 0.0430511713953968 0.758873350500715 -2.63073062370157 -0.322874990592566 Q13136 PPFIA1 Q13136.S77.p_PPFIA1 Q13136_S77s _1_1_77_77 Q13136 Q13136|Q13136-2|E9PJZ7 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4321.4321.3 16.56 16.56 99 1 1 1 0 628.9809 1804.9616 S77s TMT10 68 (K) LHEVGHERDsLQR (Q) LHEVGHERDS(1.0)LQR s:Phosphorylated S PPFIA1 136347 2 19 248.1 410.18 HUMAN 1 -13.6602 -1.1983 EVGIYRVSGVATDIQ-p P11274;S1092-p EVGIYRVSGVATDIQ 0.557101429711056 0.887705222116061 -0.158 -0.0186666666666666 4.69085668190247 0.727073062818908 -0.158 -0.0186666666666667 0.339558285294362 0.845848714701791 -1.04708873046506 -0.203923595871441 P11274 BCR P11274.S1092.p_BCR P11274_S1092s _1_1_1092_1092 P11274 P11274 Breakpoint cluster region protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28282.28282.4 10.14 7.01 1.115 3 1 1 0 694.3721 2694.4901 S1092s TMT10 1082 (R) GMEEVGIYRVsGVATDIQALK (A) GMEEVGIY(0.0)RVS(0.99)GVAT(0.0)DIQALK K:TMT10,s:Phosphorylated S BCR 143843.8 1 11 642.1 254.93 HUMAN 1 -4.6909 -0.7271 EVGRKLHSPTSSAKG-p Q0IIM8;S1035-p EVGRKLHSPTSSAKG 0.934904950489511 0.582023472940159 -0.0136666666666667 -0.105666666666667 0.575312158818238 3.17228523476653 -0.0136666666666667 -0.105666666666667 0.875928756042853 0.481694265933259 -0.163672163234848 -0.755083791710987 Q0IIM8 TBC1D8B Q0IIM8.S1035.p_TBC1D8B Q0IIM8_S1035s _1_1_1035_1035 Q0IIM8 Q0IIM8 TBC1 domain family member 8B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6753.6753.3 10.84 10.84 3.036 4 1 1 0 489.2658 1385.8153 S1035s TMT10 1033 (K) LHsPTSSAK (G) LHS(0.99)PT(0.0)S(0.0)S(0.0)AK K:TMT10,s:Phosphorylated S TBC1D8B 130190 1 5 3013.2 63.28 HUMAN 1 -0.5753 -3.1723 EVHAQLPSLEGDLRG-p Q09666;S5261-p EVHAQLPSLEGDLRG 0.152963224969452 0.156598909829766 -0.318 0.152 16.3965917545147 10.5887457592402 -0.318 0.152 0.022926661798434 0.0873223518585472 -3.14471525282343 2.08330862492402 Q09666 AHNAK Q09666.S5261.p_AHNAK Q09666_S5261s _1_1_5261_5261 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25489.25489.5 22.2 22.2 8.47 2 1 1 0 854.4532 4188.2578 S5261s TMT10 5248 (K) MEGGGAEVHAQLPsLEGDLRGPDVKLEGPDVSLK (G) MEGGGAEVHAQLPS(0.99)LEGDLRGPDVKLEGPDVS(0.0)LK K:TMT10,s:Phosphorylated S AHNAK 629603.7 4 125 1.1 4313.36 HUMAN 1 -16.3966 10.5887 EVHIRPKSWIEEQAM-p P28838;S238-p EVHIRPKSWIEEQAM 0.513311363016096 0.0471332808433669 -0.125 0.285666666666667 5.35260278175773 17.7503574417823 -0.125 0.285666666666667 0.291567908692304 0.0167866585150249 -1.16829981807155 3.40917519618198 P28838 LAP3 P28838.S238.p_LAP3 P28838_S238s _1_1_238_238 P28838 P28838|P28838-2 Cytosol aminopeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35589.35794.3 20.77 18.52 11.361 3 1 1 0 774.3933 2241.199 S238s TMT10 238 (K) sWIEEQAMGSFLSVAK (G) S(0.99)WIEEQAMGS(0.0)FLS(0.0)VAK K:TMT10,s:Phosphorylated S LAP3 56564.7 3 1 5303.1 20.77 HUMAN 1 -5.3526 17.7504 EVIETLLSLEKQTRT-p O00232;S49-p EVIETLLSLEKQTRT 0.41751649911322 0.894730338766747 0.151666666666667 -0.039 7.0030558366547 0.677880135857223 0.151666666666667 -0.039 0.199385887758189 0.85548418715577 1.46154810981277 -0.19098631168753 O00232 PSMD12 O00232.S49.p_PSMD12 O00232_S49s _1_1_49_49 O00232 O00232 26S proteasome non-ATPase regulatory subunit 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.37615.37615.3 10.7 10.7 2.944 2 1 1 0 685.0583 1973.1935 S49s TMT10 40 (R) LQEVIETLLsLEK (Q) LQEVIET(0.0)LLS(0.99)LEK K:TMT10,s:Phosphorylated S PSMD12 53302.9 1 1 3138.1 59.7 HUMAN 1 7.0031 -0.6779 EVIEVDESDVEEDIF-p P49959;S649-p EVIEVDESDVEEDIF 0.636854133601066 0.163552604342528 0.077 0.163 3.65423631397383 10.3373301366462 0.077 0.163 0.431098357919811 0.0925266815007825 0.85043127428126 2.03952571316103 P49959 MRE11A P49959.S649.p_MRE11A P49959_S649s _1_1_649_649 P49959 P49959-3|F8W7U8|P49959-2 Double-strand break repair protein MRE11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31180.31808.3 25.7 21.82 11.009 6 1 1 0 1061.8356 3103.5247 S649s TMT10 639 (K) NYSEVIEVDEsDVEEDIFPTTSK (T) NY(0.0)S(0.0)EVIEVDES(0.99)DVEEDIFPT(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S MRE11 80934.2 20 7 588.1 264.48 HUMAN 1 3.6542 10.3373 EVKAEEKSPISINVK-p Q9UK58;S352-p EVKAEEKSPISINVK 0.739118396287836 0.131316085242144 -0.0973333333333333 0.305 2.48923461340953 11.6228856686941 -0.0973333333333334 0.305 0.563736998262527 0.0688194873467194 -0.614613661271534 2.26452965461602 Q9UK58 CCNL1 Q9UK58.S352.p_CCNL1 Q9UK58_S352s _1_1_352_352 Q9UK58 Q9UK58|Q9UK58-6 Cyclin-L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16083.16083.3 15.24 11.49 1.301 2 1 1 0 694.7335 2002.2152 S352s TMT10 348 (K) AEEKsPISINVK (T) AEEKS(0.99)PIS(0.0)INVK K:TMT10,s:Phosphorylated S CCNL1 60031.9 13 4 883.1 206.76 HUMAN 1 -2.4892 11.6229 EVKARSQSGTLDGES-p P49815-4;S1397-p EVKARSQSGTLDGES 0.181449015780176 0.738674172584289 0.321333333333333 0.0586666666666667 14.5974978276886 1.81443041835233 0.321333333333333 0.0586666666666667 0.0346936679223497 0.658501787462152 2.80329689416871 0.467250085426452 P49815 TSC2 P49815.4.S1397.p_TSC2 P49815-4_S1397s _1_1_1397_1397 P49815-4 P49815|P49815-4|P49815-2|P49815-3 Isoform 4 of Tuberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16102.16102.3 20.22 15.51 1.199 10 1 1 0 1232.8894 3616.6949 S1397s TMT10 1395 (R) SQsGTLDGESAAWSASGEDSRGQPEGPLPSSSPR (S) S(0.0)QS(0.99)GT(0.0)LDGES(0.0)AAWS(0.0)AS(0.0)GEDS(0.0)RGQPEGPLPS(0.0)S(0.0)S(0.0)PR s:Phosphorylated S TSC2 200147.7 7 21 214.1 435.34 HUMAN 1 14.5975 1.8144 EVKGTSGSLADVFAN-p Q9P265;S203-p EVKGTSGSLADVFAN 0.149469437057511 0.243260582169387 -0.265666666666667 -0.267 16.6341208951194 8.08725365831411 -0.265666666666667 -0.267 0.0217064054315377 0.155336900112659 -3.19091507541582 -1.64976455135969 Q9P265 DIP2B Q9P265.S203.p_DIP2B Q9P265_S203s _1_1_203_203 Q9P265 Q9P265 Disco-interacting protein 2 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19911.19911.3 17.22 17.22 2.2 4 1 1 0 568.9437 1624.8492 S203s TMT10 199 (K) GTSGsLADVFANTR (I) GT(0.0)S(0.0)GS(0.99)LADVFANT(0.0)R s:Phosphorylated S DIP2B 173713.6 3 8 1010.1 188.94 HUMAN 1 -16.6341 -8.0873 EVKRLYGSVCDLRTN-p Q8N9U0;S156-p EVKRLYGSVCDLRTN 0.597918768837268 0.113006654111763 0.0736666666666667 -0.176 4.12445043385654 12.4888494657071 0.0736666666666667 -0.176 0.386861005809878 0.0563786994669696 0.940844896408556 -2.41809042834231 Q8N9U0 TC2N Q8N9U0.S156.p_TC2N Q8N9U0_S156s _1_1_156_156 Q8N9U0 Q8N9U0|Q8N9U0-2 Tandem C2 domains nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16992.16992.2 14.21 7.62 5.878 2 1 1 0 696.3339 1311.6928 S156s TMT10 153 (R) LYGsVCDLR (T) LY(0.0)GS(0.99)VCDLR C:Carbamidomethylation,s:Phosphorylated S TC2N 55796.6 4 3 1080.1 179.95 HUMAN 1 4.1245 -12.4888 EVKTEVLSPNSKVES-p Q8NEZ4-3;S2828-p EVKTEVLSPNSKVES 0.179935774950283 0.400414968193851 -0.269 -0.108666666666667 14.7038420995965 5.28709077835493 -0.269 -0.108666666666667 0.0338544521363352 0.295999462317507 -2.82308886031063 -1.15617315326371 Q8NEZ4 KMT2C Q8NEZ4.3.S2828.p_KMT2C Q8NEZ4-3_S2828s _1_1_2828_2828 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17510.17510.5 22.05 22.05 4.84 7 1 1 0 655.3715 3192.8497 S2828s TMT10 2816 (K) STVTNEVKTEVLsPNSKVESK (C) S(0.0)T(0.0)VT(0.0)NEVKT(0.0)EVLS(0.99)PNS(0.0)KVES(0.0)K K:TMT10,s:Phosphorylated S KMT2C 554869.1 8 15 88.1 626.31 HUMAN 1 -14.7038 -5.2871 EVKVEQNSEPCAGSS-p Q8N806;S257-p EVKVEQNSEPCAGSS 0.579965732613118 0.560015722654393 0.103666666666667 0.123 4.35193009376602 3.39438221563932 0.103666666666667 0.123 0.367119108975061 0.457679835261017 0.983831478444413 0.799317118871199 Q8N806 UBR7 Q8N806.S257.p_UBR7 Q8N806_S257s _1_1_257_257 Q8N806 Q8N806|E9PCJ7 Putative E3 ubiquitin-protein ligase UBR7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21164.21164.5 18.96 19.22 3.468 8 1 1 0 945.671 4644.3757 S257s TMT10 250 (R) EVKVEQNsEPCAGSSSESDLQTVFKNESLNAESK (S) EVKVEQNS(0.99)EPCAGS(0.0)S(0.0)S(0.0)ES(0.0)DLQT(0.0)VFKNES(0.0)LNAES(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S UBR7 49367.3 1 4 1053.1 182.86 HUMAN 1 4.3519 3.3944 EVKVKPASPVAQPKE-p Q96EV2;S765-p EVKVKPASPVAQPKE 0.621867421925022 0.00668118080846704 -0.109333333333333 0.51 3.83512709785382 31.2467958791628 -0.109333333333333 0.51 0.413511212615051 0.000750447667487309 -0.885479858315269 6.80922977601881 Q96EV2 RBM33 Q96EV2.S765.p_RBM33 Q96EV2_S765s _1_1_765_765 Q96EV2 Q96EV2 RNA-binding protein 33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13653.13653.4 20.11 14.39 8.991 4 1 1 0 1039.2885 4074.1689 S765s TMT10 761 (K) VKPAsPVAQPKEEAKTETEFPDEDEETR (L) VKPAS(0.99)PVAQPKEEAKT(0.0)ET(0.0)EFPDEDEET(0.0)R K:TMT10,s:Phosphorylated S RBM33 130268.8 10 6 662.1 251.2 HUMAN 1 -3.8351 31.2468 EVKVRKRSPAGLLRP-p O15417;S1925-p EVKVRKRSPAGLLRP 0.962379020091621 0.138046624646755 0.00733333333333333 -0.157 0.321992065118664 11.331823772526 0.00733333333333333 -0.157 0.928540376950084 0.0735898000222614 0.0939357968854301 -2.21331466001247 O15417 TNRC18 O15417.S1925.p_TNRC18 O15417_S1925s _1_1_1925_1925 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10811.10811.2 10.43 6.34 99 1 1 1 0 624.3571 1167.7411 S1925s Hydrogen 1925 (R) sPAGLLRPK (K) S(1.0)PAGLLRPK K:TMT10-Lys-Only,s:Phosphorylated S TNRC18 316168 7 18 75.1 647.68 HUMAN 1 0.322 -11.3318 EVKYFAESDEEEDDV-p Q02880;S1613-p EVKYFAESDEEEDDV 0.807399255272832 0.178742216526909 0.0363333333333333 0.153 1.78754220192098 9.83592031139299 0.0363333333333333 0.153 0.662591377239606 0.103850351031344 0.461220181453894 1.95244281723091 Q02880 TOP2B Q02880.S1613.p_TOP2B Q02880_S1613s _1_1_1613_1613 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.35071.35601.2 16 16 16 2 1 1 0 1241.4803 2401.9856 S1613s TMT10 1609 (K) YFAEsDEEEDDVDFAMFN (-) Y(0.0)FAES(0.99)DEEEDDVDFAMFN s:Phosphorylated S TOP2B 184233.7 16 48 71.1 658.36 HUMAN 1 1.7875 9.8359 EVLADGDTLDFEDDT-p Q32MZ4-2;T652-p EVLADGDTLDFEDDT 0.866211535077826 0.197108841855211 0.0266666666666667 0.131333333333333 1.21381169563177 9.27938618049112 0.0266666666666667 0.131333333333333 0.756168932856097 0.118048747061399 0.326683149530167 1.8560468952115 Q32MZ4 LRRFIP1 Q32MZ4.2.T652.p_LRRFIP1 Q32MZ4-2_T652t _1_1_652_652 Q32MZ4-2 Q32MZ4|Q32MZ4-2|Q32MZ4-3 Isoform 2 of Leucine-rich repeat flightless-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.28888.28888.5 28.8 28.8 5.862 5 1 1 0 1032.7023 5079.5373 T652t TMT10 626 (K) IKLDGKLDQEGDDVQTAAEEVLADGDtLDFEDDTVQSSGPR (A) IKLDGKLDQEGDDVQT(0.0)AAEEVLADGDT(0.99)LDFEDDT(0.0)VQS(0.0)S(0.0)GPR K:TMT10,t:Phosphorylated T LRRFIP1 87029.9 2 14 235.1 419.93 HUMAN 1 1.2138 9.2794 EVLEKEKSLLSQEKE-p Q15643;S432-p EVLEKEKSLLSQEKE 0.201344466647756 0.0889989061667031 -0.207 0.188 13.5177470651105 13.9043237764792 -0.207 0.188 0.0444861983079907 0.0406974897398866 -2.60479414023666 2.67377826493498 Q15643 TRIP11 Q15643.S432.p_TRIP11 Q15643_S432s _1_1_432_432 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13718.13718.3 8.32 0.49 1.217 2 1 1 0 610.3523 1749.0725 S432s TMT10 430 (K) EKsLLSQEK (E) EKS(0.99)LLS(0.0)QEK K:TMT10,s:Phosphorylated S TRIP11 228267 1 4 463.1 303.86 HUMAN 1 -13.5177 13.9043 EVLERSHSPPLKLTP-p Q86TP1;S321-p EVLERSHSPPLKLTP 0.647359246011148 0.125857016432335 -0.065 0.190666666666667 3.53769164600976 11.8684158415102 -0.065 0.190666666666667 0.442823678644194 0.0650366878788258 -0.827658764304254 2.30788006738564 Q86TP1 PRUNE Q86TP1.S321.p_PRUNE Q86TP1_S321s _1_1_321_321 Q86TP1 Q86TP1|Q86TP1-2|Q86TP1-3|Q86TP1-4|Q86TP1-7|Q86TP1-5 Exopolyphosphatase PRUNE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6324.6324.3 10.41 10.41 2.092 2 1 1 0 435.2438 1223.7512 S321s TMT10 319 (R) SHsPPLK (L) S(0.0)HS(0.99)PPLK K:TMT10,s:Phosphorylated S PRUNE1 50826.3 4 1 3186.1 58.23 HUMAN 1 -3.5377 11.8684 EVLRDDCSDGETREE-p Q8N720-3;S80-p EVLRDDCSDGETREE 0.746396283671232 0.0395615477487953 0.0546666666666667 0.360666666666667 2.41281543180164 18.8118750297428 0.0546666666666667 0.360666666666667 0.573744396249062 0.0131465711754185 0.598399319509149 3.62533962306704 Q8N720 ZNF655 Q8N720.3.S80.p_ZNF655 Q8N720-3_S80s _1_1_80_80 Q8N720-3 Q8N720-3 Isoform 3 of Zinc finger protein 655 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4398.4398.3 14.08 14.08 14.082 2 1 1 0 787.6786 2281.0564 S80s Hydrogen 73 (R) EVLRDDCsDGETREENK (L) EVLRDDCS(0.99)DGET(0.0)REENK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S ZNF655 62737.6 1 3 4215.1 35.29 HUMAN 1 2.4128 18.8119 EVLSPEGSPSKSPSK-p Q9UEY8;S677-p EVLSPEGSPSKSPSK 0.247779449612631 0.00344325143052596 -0.287 0.707666666666667 11.5780706978653 36.8108301255904 -0.287 0.707666666666667 0.0695333142554753 0.00020840924843307 -2.25771178181726 8.78536783282585 Q9UEY8 ADD3 Q9UEY8.S677.p_ADD3 Q9UEY8_S677s _1_1_677_677 Q9UEY8 Q9UEY8|Q9UEY8-2 Gamma-adducin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20635.20635.4 13.93 13.93 1.89 4 1 1 0 645.8455 2500.4113 S677s TMT10 664 (K) SPEKIEEVLSPEGsPSK (S) S(0.0)PEKIEEVLS(0.0)PEGS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S ADD3 79495.5 15 27 264.2 396.09 HUMAN 1 -11.5781 36.8108 EVLVFELSPDRSLRG-p Q8IYI6;S399-p EVLVFELSPDRSLRG 0.950466896477293 0.971190520605253 -0.01 0.00433333333333337 0.435248083044788 0.180237293264256 -0.01 0.00433333333333338 0.904638760372291 0.959348212455211 -0.12552634736135 0.053370186080174 Q8IYI6 EXOC8 Q8IYI6.S399.p_EXOC8 Q8IYI6_S399s _1_1_399_399 Q8IYI6 Q8IYI6 Exocyst complex component 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32142.32142.3 20.11 19.43 11.299 2 1 1 0 652.3416 1875.0425 S399s TMT10 389 (R) QLTEVLVFELsPDR (S) QLT(0.0)EVLVFELS(0.99)PDR s:Phosphorylated S EXOC8 82482.3 4 4 1770.1 116.15 HUMAN 1 -0.4352 0.1802 EVMKRIQSLLDIQEK-p Q93009;S1026-p EVMKRIQSLLDIQEK 0.373695113080525 0.212484650470717 -0.241 0.340666666666667 7.9211458106145 8.84969582403245 -0.241 0.340666666666667 0.161393269252094 0.130325805428334 -1.62147847374951 1.78171558924472 Q93009 USP7 Q93009.S1026.p_USP7 Q93009_S1026s _1_1_1026_1026 Q93009 Q93009|Q93009-3 Ubiquitin carboxyl-terminal hydrolase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29074.29074.3 12.49 9.37 99 1 1 1 0 575.6589 1644.9936 S1026s TMT10 1024 (R) IQsLLDIQEK (E) IQS(1.0)LLDIQEK K:TMT10,s:Phosphorylated S USP7 129383.8 1 7 1927.1 106.49 HUMAN 1 -7.9211 8.8497 EVNGEVRSRRDSICS-p Q08378;S385-p EVNGEVRSRRDSICS 0.659595024833796 0.0190433095105341 0.108 0.337666666666667 3.38837477829767 23.658534295893 0.108 0.337666666666667 0.458313365170888 0.00430671933801579 0.79824960499084 4.70638523573185 Q08378 GOLGA3 Q08378.S385.p_GOLGA3 Q08378_S385s _1_1_385_385 Q08378 Q08378|Q08378-2|Q08378-4 Golgin subfamily A member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10814.10814.4 21.12 21.12 99 1 1 1 0 729.8473 2836.4135 S385s TMT10 363 (K) DVLQAAAAEHQDQGQEVNGEVRsR (R) DVLQAAAAEHQDQGQEVNGEVRS(1.0)R s:Phosphorylated S GOLGA3 167865.2 2 7 515.1 286.2 HUMAN 1 3.3884 23.6585 EVPDEAESAEAGAVP-p O60331-3;S11-p EVPDEAESAEAGAVP 0.288318695668123 0.677141681423276 -0.169333333333333 -0.0406666666666666 10.1858780487759 2.31346030901401 -0.169333333333333 -0.0406666666666667 0.0958102989183433 0.587021447656093 -2.01402313266419 -0.577082013565847 O60331 PIP5K1C O60331.3.S11.p_PIP5K1C O60331-3_S11s _1_1_11_11 O60331-3 O60331-3|O60331-2|O60331-4 Isoform 3 of Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32310.32310.5 25.64 25.64 7.09 3 1 1 0 845.2139 4142.064 S11s Acetyl 1 (-) MELEVPDEAEsAEAGAVPSEAAWAAESGAAAGLAQKK (A) MELEVPDEAES(0.99)AEAGAVPS(0.0)EAAWAAES(0.0)GAAAGLAQKK K:TMT10,s:Phosphorylated S PIP5K1C 77824.9 5 1 3401.1 51.94 HUMAN 1 -10.1859 -2.3135 EVPEANGSAGKRSKK-p Q9NX58;S244-p EVPEANGSAGKRSKK 0.144553348646169 0.00628852073001697 0.377333333333333 -0.534333333333333 17.1479824054723 31.7023096258477 0.377333333333333 -0.534333333333333 0.0192842058821412 0.0006757235226145 3.29183826161719 -6.95539027593315 Q9NX58 LYAR Q9NX58.S244.p_LYAR Q9NX58_S244s _1_1_244_244 Q9NX58 Q9NX58 Cell growth-regulating nucleolar protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10081.10081.5 22.37 22.37 99 1 1 1 0 705.5775 3443.89 S244s TMT10 224 (R) KKGQEADLEAGGEEVPEANGsAGKR (S) KKGQEADLEAGGEEVPEANGS(1.0)AGKR K:TMT10,s:Phosphorylated S LYAR 44070.4 2 1 3609.1 47.07 HUMAN 1 17.148 -31.7023 EVPEEQGSKDRGLDS-p E9PGC8;S843-p EVPEEQGSKDRGLDS 0.361753568197081 0.0158142275468311 -0.157 0.694333333333333 8.20412609741643 24.8919330645516 -0.157 0.694333333333333 0.151212394363094 0.00324195284430021 -1.67055366211767 5.01024050653782 E9PGC8 NotFound E9PGC8.S843.p_NotFound E9PGC8_S843s _1_1_843_843 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19556.19556.3 11.14 11.14 99 1 1 1 0 660.3438 1899.0475 S843s TMT10 832 (K) ELVPEVPEEQGsK (D) ELVPEVPEEQGS(1.0)K K:TMT10,s:Phosphorylated S MAP1A 332906.7 1 9 20.1 1016.98 HUMAN 1 -8.2041 24.8919 EVPGSQASPNPVPGD-p Q96GM8;S428-p EVPGSQASPNPVPGD 0.457955481063929 0.610696958223465 -0.178333333333333 0.129 6.25299692481782 2.90971132499591 -0.178333333333333 0.129 0.236973786236287 0.511715848098919 -1.32951037021008 0.701916393462291 Q96GM8 TOE1 Q96GM8.S428.p_TOE1 Q96GM8_S428s _1_1_428_428 Q96GM8 Q96GM8|Q96GM8-2 Target of EGR1 protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11832.11832.3 12.87 12.12 2.228 4 1 1 0 828.0694 2402.2262 S428s TMT10 418 (R) ATSEVPGSQAsPNPVPGDGLHR (A) AT(0.0)S(0.0)EVPGS(0.0)QAS(0.99)PNPVPGDGLHR s:Phosphorylated S TOE1 57402.6 1 3 3984.1 39.7 HUMAN 1 -6.253 2.9097 EVPKKQNSPVAPTAQ-p Q6P1N0;S455-p EVPKKQNSPVAPTAQ 0.385612068628625 0.263565249535437 -0.144333333333333 -0.149666666666667 7.66149381100449 7.63008402602481 -0.144333333333333 -0.149666666666667 0.171336787151151 0.172580450130699 -1.57637771860968 -1.57044249402157 Q6P1N0 CC2D1A Q6P1N0.S455.p_CC2D1A Q6P1N0_S455s _1_1_455_455 Q6P1N0 Q6P1N0|Q6P1N0-2 Coiled-coil and C2 domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13886.13886.4 18.4 11.67 2.621 2 1 1 0 1065.0465 4177.2071 S455s TMT10 435 (K) LANQDEGPEDEEDEVPKKQNsPVAPTAQPK (A) LANQDEGPEDEEDEVPKKQNS(0.99)PVAPT(0.0)AQPK K:TMT10,s:Phosphorylated S CC2D1A 104460 8 4 1492.1 137.02 HUMAN 1 -7.6615 -7.6301 EVPPAEESPEVTTEA-p P49321-3;S346-p EVPPAEESPEVTTEA 0.477861644067197 0.0127632121346538 0.0936666666666667 0.445 5.90090793039744 26.3959366114558 0.0936666666666667 0.445 0.256985847533474 0.00229301205981525 1.26689099328685 5.39900243660076 P49321 NASP P49321.3.S346.p_NASP P49321-3_S346s _1_1_346_346 P49321-3 P49321-3|P49321-4 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.39080.39080.5 34.9 34.9 1.309 6 1 1 0 1150.9895 5670.9733 S346s TMT10 330 (K) AVLEQLVGQEVPPAEEsPEVTTEAAEASAVEAGSEVSEKPGQEAPVLPK (D) AVLEQLVGQEVPPAEES(0.99)PEVT(0.0)T(0.0)EAAEAS(0.0)AVEAGS(0.0)EVS(0.0)EKPGQEAPVLPK K:TMT10,s:Phosphorylated S NASP 86552 3 11 87.1 626.46 HUMAN 1 5.9009 26.3959 EVPPRPASPKVTRSP-p Q9Y3L3;S544-p EVPPRPASPKVTRSP 0.861115203926595 0.992447996701479 -0.0286666666666667 0.00100000000000002 1.26851783422352 0.0474055399716707 -0.0286666666666667 0.00100000000000002 0.746703550874929 0.989143829248147 -0.339940260140434 0.0142452156638253 Q9Y3L3 SH3BP1 Q9Y3L3.S544.p_SH3BP1 Q9Y3L3_S544s _1_1_544_544 Q9Y3L3 Q9Y3L3|Q6ZT62|Q6ZT62-2 SH3 domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6076.6076.3 12.75 6.69 6.05 3 1 1 0 740.0598 2138.197 S544s TMT10 532 (K) ERTESEVPPRPAsPK (V) ERT(0.0)ES(0.0)EVPPRPAS(0.99)PK K:TMT10,s:Phosphorylated S SH3BP1 76054.2 16 2 1166.1 170.58 HUMAN 1 -1.2685 0.0474 EVPRTPRTPTTPGFA-p Q8WU20;T135-p EVPRTPRTPTTPGFA 0.366499004404231 0.0165083488668904 -0.135666666666667 -0.494 8.09310764604064 24.6137774194875 -0.135666666666667 -0.494 0.155127657822896 0.00345638616460634 -1.65130854159612 -4.94057621797784 Q8WU20 FRS2 Q8WU20.T135.p_FRS2 Q8WU20_T135t _1_1_135_135 Q8WU20 Q8WU20 Fibroblast growth factor receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16254.16254.3 17.77 17.77 2.258 5 1 1 0 855.7647 2485.3149 T135t TMT10 132 (R) TPRtPTTPGFAAQNLPNGYPR (Y) T(0.0)PRT(0.99)PT(0.0)T(0.0)PGFAAQNLPNGY(0.0)PR t:Phosphorylated T FRS2 57427.4 5 3 301.1 376.53 HUMAN 1 -8.0931 -24.6138 EVQAIIESTPELDMD-p O60271;S347-p EVQAIIESTPELDMD 0.0986992178204749 0.00595004777315755 -0.375666666666667 -0.639333333333333 21.2759957500062 32.141962409478 -0.375666666666667 -0.639333333333334 0.0074541894284355 0.000610666026098679 -4.15830248223413 -7.09891247055445 O60271 SPAG9 O60271.S347.p_SPAG9 O60271_S347sT348t_2_2_347_348 O60271 O60271|A0A087X2D8|O60271-2|O60271-4 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26072.26072.3 14.87 14.87 14.137 3 2 2 0 841.7305 2363.2416 S347s T348t TMT10 339 (K) SEVQAIIEstPELDMDK (D) S(0.0)EVQAIIES(0.99)T(0.99)PELDMDK K:TMT10,s:Phosphorylated S,t:Phosphorylated T SPAG9 147001.6 3 45 84.1 629.25 HUMAN 1 -21.276 -32.142 EVQEKRESPPAGQKT-p J3KPC5;S546-p EVQEKRESPPAGQKT 0.246863210495205 0.143291379897987 -0.279666666666667 0.162333333333333 11.6193419636082 11.1157565637279 -0.279666666666667 0.162333333333333 0.0688756647797916 0.077343593044941 -2.26499268636131 2.1754087225842 J3KPC5 NotFound J3KPC5.S546.p_NotFound J3KPC5_S546s _1_1_546_546 J3KPC5 P47736-4|J3KPC5|P47736-3|A0A0A0MQY8|P47736-2 RAP1, GTPase activating protein 1, isoform CRA_e HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16200.16200.4 10.6 3.95 5.685 3 1 1 0 841.4529 3282.8261 S546s TMT10 529 (R) SSAIGIENIQEVQEKREsPPAGQK (T) S(0.0)S(0.0)AIGIENIQEVQEKRES(0.99)PPAGQK K:TMT10,s:Phosphorylated S RAP1GAP 77232.3 2 4 3303.1 54.4 HUMAN 1 -11.6193 11.1158 EVQQKQGSPHQEWFT-p Q9ULE4;S1048-p EVQQKQGSPHQEWFT 0.0576036189507777 0.00705277551166316 -0.712333333333333 -0.64 27.0821538183993 30.8155760389021 -0.712333333333334 -0.64 0.00195787345469617 0.0008287859805845 -5.59119786332801 -6.67319585653714 Q9ULE4 FAM184B Q9ULE4.S1048.p_FAM184B Q9ULE4_S1048s _1_1_1048_1048 Q9ULE4 Q9ULE4 Protein FAM184B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14688.14688.3 16.36 16.36 6.759 2 1 1 0 628.3123 1802.959 S1048s TMT10 1046 (K) QGsPHQEWFTK (Y) QGS(0.99)PHQEWFT(0.0)K K:TMT10,s:Phosphorylated S FAM184B 121954.4 1 3 2584.1 77.53 HUMAN 1 -27.0822 -30.8156 EVQQLKASVKNYEGM-p Q5BJF6-4;S530-p EVQQLKASVKNYEGM 0.706419353402032 0.033872153402835 -0.057 -0.264666666666667 2.83778597195251 19.8189598738224 -0.057 -0.264666666666667 0.520261157451005 0.0104256709212771 -0.687267717994092 -3.83665577978612 Q5BJF6 ODF2 Q5BJF6.4.S530.p_ODF2 Q5BJF6-4_S530s _1_1_530_530 Q5BJF6-4 Q5BJF6|Q5BJF6-4|Q5BJF6-3|Q5BJF6-2 Isoform 4 of Outer dense fiber protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17231.17231.4 10.87 10.87 99 1 1 1 0 644.1259 2493.512 S530s TMT10 517 (K) LNQAHLEVQQLKAsVK (N) LNQAHLEVQQLKAS(1.0)VK K:TMT10,s:Phosphorylated S ODF2 96031.2 1 10 853.1 211.96 HUMAN 1 -2.8378 -19.819 EVQREGPSCPSPGPF-p Q4AC94;S2111-p EVQREGPSCPSPGPF 0.937961135762645 0.19962644515866 -0.015 -0.21 0.542084793977217 9.20649777170776 -0.015 -0.21 0.882656087103538 0.120046699094537 -0.154711014515053 -1.84343482321518 Q4AC94 C2CD3 Q4AC94.S2111.p_C2CD3 Q4AC94_S2111s _1_1_2111_2111 Q4AC94 Q4AC94 C2 domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19032.19032.3 12.57 12.57 1.105 2 1 1 0 829.3759 2406.1453 S2111s Hydrogen 2108 (R) EGPsCPSPGPFCREELMVK (S) EGPS(0.99)CPS(0.0)PGPFCREELMVK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S C2CD3 262780.3 1 11 722.1 237.14 HUMAN 1 -0.5421 -9.2065 EVRKNKESKDPADET-p P16949;S139-p EVRKNKESKDPADET 0.451048552802647 0.714718777454009 0.308 0.0366666666666667 6.38361673073804 2.00715561190867 0.308 0.0366666666666667 0.229952601355759 0.629918609551833 1.35262579747568 0.510326790107303 P16949 STMN1 P16949.S139.p_STMN1 P16949_S139s _1_1_139_139 P16949 P16949 Stathmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7500.7500.3 11.4 11.4 1.184 2 1 1 0 772.7136 2236.1548 S139s TMT10 136 (K) NKEsKDPADETEAD (-) NKES(0.99)KDPADET(0.0)EAD K:TMT10,s:Phosphorylated S STMN1 17302.2 1 10 690.1 243.18 HUMAN 1 6.3836 2.0072 EVRVRPGSALAAAVA-p Q7Z2K8;S895-p EVRVRPGSALAAAVA 0.955933195191128 0.0737308875884868 -0.01 -0.237333333333333 0.382193228107953 15.0333797940099 -0.00999999999999999 -0.237333333333333 0.915757906944497 0.0313806561807589 -0.110814114672198 -2.88282762562875 Q7Z2K8 GPRIN1 Q7Z2K8.S895.p_GPRIN1 Q7Z2K8_S895s _1_1_895_895 Q7Z2K8 Q7Z2K8 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23405.23405.4 21.61 18.54 16.169 2 1 1 0 863.9568 3372.8316 S895s TMT10 891 (R) VRPGsALAAAVAPPEPAEPVRDVSWDEK (G) VRPGS(0.99)ALAAAVAPPEPAEPVRDVS(0.0)WDEK K:TMT10,s:Phosphorylated S GPRIN1 103196.3 2 25 292.1 381.4 HUMAN 1 -0.3822 -15.0334 EVSEAGASNPSLQEK-p A0A286YES6;S161-p EVSEAGASNPSLQEK 0.89832071009182 0.869218579500967 -0.0203333333333333 0.017 0.912503168447212 0.857722007615721 -0.0203333333333333 0.017 0.810493774175268 0.820781953842314 -0.251784431699635 0.237775587336891 A0A286YES6 NotFound A0A286YES6.S161.p_NotFound A0A286YES6_S161s _1_1_161_161 A0A286YES6 A0A286YES6|O94854|O94854-2 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22001.22001.3 17.86 17.86 3.56 5 1 1 0 895.45 2604.3769 S161s TMT10 148 (R) IEASLSEVSEAGAsNPSLQEK (K) IEAS(0.0)LS(0.0)EVS(0.0)EAGAS(0.99)NPS(0.0)LQEK K:TMT10,s:Phosphorylated S MACF1 151593.8 1 1 2797.1 70.2 HUMAN 1 -0.9125 0.8577 EVSIRVGSPQPSSSG-p O94761;S251-p EVSIRVGSPQPSSSG 0.145422922117425 0.161298297753186 0.286333333333333 0.148333333333333 17.0614007875127 10.4197475896745 0.286333333333333 0.148333333333333 0.0196725166363077 0.0907873293900511 3.27473801278461 2.05386858568403 O94761 RECQL4 O94761.S251.p_RECQL4 O94761_S251s _1_1_251_251 O94761 O94761|A0A087WZ30 ATP-dependent DNA helicase Q4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7138.7138.2 16.17 13.14 3.237 4 1 1 0 877.9401 1674.9063 S251s TMT10 249 (R) VGsPQPSSSGGEK (R) VGS(0.99)PQPS(0.0)S(0.0)S(0.0)GGEK K:TMT10,s:Phosphorylated S RECQL4 135071.6 4 3 2196.1 93.8 HUMAN 1 17.0614 10.4197 EVSRIVGSVEFDSMM-p P42224;S740-p EVSRIVGSVEFDSMM 0.712444905108247 0.230445226249013 0.056 -0.191666666666667 2.76984728080955 8.39536306026143 0.056 -0.191666666666667 0.52846383482272 0.144698388349291 0.673265034273702 -1.70311760771336 P42224 STAT1 P42224.S740.p_STAT1 P42224_S740s _1_1_740_740 P42224 P42224 Signal transducer and activator of transcription 1-alpha/beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35901.35901.2 11.72 11.72 3.083 3 1 1 0 919.4201 1757.8651 S740s TMT10 737 (R) IVGsVEFDSMMNTV (-) IVGS(0.99)VEFDS(0.0)MMNT(0.0)V s:Phosphorylated S STAT1 87903.7 1 4 2688.1 73.96 HUMAN 1 2.7698 -8.3954 EVSSLEGSPPPCLGQ-p Q02952;S1395-p EVSSLEGSPPPCLGQ 0.279975887997309 0.863142392123643 0.180666666666667 0.0173333333333333 10.4478320937541 0.901030549615223 0.180666666666667 0.0173333333333334 0.0902021295204302 0.812637660202804 2.05963309535457 0.248841161719067 Q02952 AKAP12 Q02952.S1395.p_AKAP12 Q02952_S1395s _1_1_1395_1395 Q02952 Q02952|Q02952-2|Q02952-3 A-kinase anchor protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20010.20010.3 14 14 4.28 4 1 1 0 971.4634 2832.416 S1395s TMT10 1388 (K) EVSSLEGsPPPCLGQEEAVCTK (I) EVS(0.0)S(0.0)LEGS(0.99)PPPCLGQEEAVCT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AKAP12 192048.9 1 8 2207.1 93.46 HUMAN 1 10.4478 0.901 EVSTRARSKLPSGKN-p O43237;S49-p EVSTRARSKLPSGKN 0.707931259978177 0.686100350289885 0.053 -0.049 2.82065595712972 2.23973254335652 0.053 -0.049 0.522317292388193 0.597072055637429 0.683744001036896 -0.561193375959551 O43237 DYNC1LI2 O43237.S49.p_DYNC1LI2 O43237_S49s _1_1_49_49 O43237 O43237|O43237-2|B4E2E0 Cytoplasmic dynein 1 light intermediate chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6726.6726.3 7.62 7.62 5.896 2 1 1 0 418.9123 1174.756 S49s Hydrogen 49 (R) sKLPSGK (N) S(0.99)KLPS(0.0)GK K:TMT10-Lys-Only,s:Phosphorylated S DYNC1LI2 54383.6 1 2 576.1 267.98 HUMAN 1 2.8207 -2.2397 EVSTRSRSKLPAGKN-p Q9Y6G9;S62-p EVSTRSRSKLPAGKN 0.177952626351024 0.716054394481659 0.215 -0.0373333333333333 14.8417195171239 1.9941285285868 0.215 -0.0373333333333333 0.0327965414925157 0.631810948096056 2.84881791544503 -0.507442515339064 Q9Y6G9 DYNC1LI1 Q9Y6G9.S62.p_DYNC1LI1 Q9Y6G9_S62s _1_1_62_62 Q9Y6G9 Q9Y6G9|E9PHI6 Cytoplasmic dynein 1 light intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7038.7038.3 8.53 3.12 99 1 1 1 0 413.5804 1158.7611 S62s Hydrogen 62 (R) sKLPAGK (N) S(1.0)KLPAGK K:TMT10-Lys-Only,s:Phosphorylated S DYNC1LI1 56863.4 2 3 510.1 287.75 HUMAN 1 14.8417 -1.9941 EVTCDPDSGGSQGLR-p Q9C0C2;S1328-p EVTCDPDSGGSQGLR 0.438371281586726 0.596470369167648 0.172 -0.06 6.5947714101616 3.03769530952046 0.172 -0.06 0.219039711605085 0.496855920315437 1.38987646390664 -0.727955384710214 Q9C0C2 TNKS1BP1 Q9C0C2.S1328.p_TNKS1BP1 Q9C0C2_S1328s _1_1_1328_1328 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.29232.29232.4 24.33 24.33 1.193 3 1 1 0 964.4462 3774.8013 S1328s TMT10 1303 (K) ELGVGQMDWGNNLGLRDLEVTCDPDsGGSQGLR (G) ELGVGQMDWGNNLGLRDLEVT(0.0)CDPDS(0.99)GGS(0.0)QGLR C:Carbamidomethylation,s:Phosphorylated S TNKS1BP1 182819.3 5 57 4.1 2105.7 HUMAN 1 6.5948 -3.0377 EVTEYYISGDEDRKG-p Q5SWA1;S653-p EVTEYYISGDEDRKG 0.103816750749035 0.357597094900104 -0.401333333333333 0.0973333333333333 20.7813340690883 5.92470256900191 -0.401333333333333 0.0973333333333334 0.0083534637648112 0.255581693279554 -4.04867587804292 1.27083956872673 Q5SWA1 NotFound Q5SWA1.S653.p_NotFound Q5SWA1_S653s _1_1_653_653 Q5SWA1 Q5SWA1 Protein phosphatase 1 regulatory subunit 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.31142.31155.3 19.16 14.16 1.994 5 1 1 0 944.4643 2751.4129 S653s TMT10 640 (K) KVTFLEEVTEYYIsGDEDR (K) KVT(0.0)FLEEVT(0.0)EY(0.0)Y(0.0)IS(0.99)GDEDR K:TMT10,s:Phosphorylated S PPP1R15B 80120 3 3 2384.1 85.62 HUMAN 1 -20.7813 5.9247 EVTTREVSGIKALYE-p Q03252;S90-p EVTTREVSGIKALYE 0.301639765350884 0.670191716861218 0.212 0.0823333333333334 9.75989229550889 2.37497611085532 0.212 0.0823333333333334 0.105684371848138 0.578765171941701 1.9400241135708 0.590256611549224 Q03252 LMNB2 Q03252.S90.p_LMNB2 Q03252_S90s _1_1_90_90 Q03252 Q03252 Lamin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14237.14237.4 11.5 11.5 3.355 4 1 1 0 643.8608 2492.4539 S90s TMT10 78 (K) ISEKEEVTTREVsGIK (A) IS(0.0)EKEEVT(0.0)T(0.0)REVS(0.99)GIK K:TMT10,s:Phosphorylated S LMNB2 70061.3 1 22 440.2 312.01 HUMAN 1 9.7599 2.375 EVVFIGDSLVQLMHQ-p Q15102;S47-p EVVFIGDSLVQLMHQ 0.260407038253762 0.146508781295827 0.222666666666667 0.186333333333333 11.0711515951456 10.9846356101014 0.222666666666667 0.186333333333333 0.0781420572055188 0.0797143371202148 2.16857920214094 2.15244900612176 Q15102 PAFAH1B3 Q15102.S47.p_PAFAH1B3 Q15102_S47s _1_1_47_47 Q15102 Q15102 Platelet-activating factor acetylhydrolase IB subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.32677.32677.5 22.97 22.97 22.974 2 1 1 0 869.4545 4263.2549 S47s TMT10 30 (R) FVADSKDKEPEVVFIGDsLVQLMHQCEIWR (E) FVADS(0.0)KDKEPEVVFIGDS(0.99)LVQLMHQCEIWR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PAFAH1B3 25847.9 2 1 3003.1 63.51 HUMAN 1 11.0712 10.9846 EVVGESDSEVEGDAW-p P55081;S118-p EVVGESDSEVEGDAW 0.188778224113783 0.262560588773722 0.266666666666667 0.133333333333333 14.191283499509 7.65164139690869 0.266666666666667 0.133333333333333 0.0380953221103953 0.171725923391228 2.72810653242339 1.57418848154728 P55081 MFAP1 P55081.S118.p_MFAP1 P55081_S116sS118s_2_2_116_118 P55081 P55081 Microfibrillar-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22357.22357.3 26.39 26.39 99 2 2 2 0 983.4641 2788.4405 S116s S118s TMT10 106 (R) KIVEPEVVGEsDsEVEGDAWR (M) KIVEPEVVGES(1.0)DS(1.0)EVEGDAWR K:TMT10,s:Phosphorylated S MFAP1 51957.5 13 12 354.1 349.52 HUMAN 1 14.1913 7.6516 EVVGGDDSDGLRAED-p P25490;S118-p EVVGGDDSDGLRAED 0.95183843847147 0.40745351119909 0.0116666666666667 -0.086 0.425091273608001 5.18970754591942 0.0116666666666667 -0.086 0.906756907504509 0.302711726743775 0.122721372237708 -1.13847450981761 P25490 YY1 P25490.S118.p_YY1 P25490_S118s _1_1_118_118 P25490 P25490 Transcriptional repressor protein YY1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.36914.36914.5 24.37 24.37 14.305 4 1 1 0 1111.3378 5472.7222 S118s TMT10 110 (R) EEVVGGDDsDGLRAEDGFEDQILIPVPAPAGGDDDYIEQTLVTVAAAGK (S) EEVVGGDDS(0.99)DGLRAEDGFEDQILIPVPAPAGGDDDY(0.0)IEQT(0.0)LVT(0.0)VAAAGK K:TMT10,s:Phosphorylated S YY1 45168.2 1 1 1217.1 165.22 HUMAN 1 0.4251 -5.1897 EVVIKNDSN______-p P22415;S309-p EVVIKNDSN______ 0.181858235181653 0.0409049706473886 0.216666666666667 0.336333333333333 14.5745023497918 18.6063547278336 0.216666666666667 0.336333333333333 0.0348778547749767 0.0137836592172752 2.79902312691186 3.58297769213424 P22415 USF1 P22415.S309.p_USF1 P22415_S309s _1_1_309_309 P22415 P22415|B1AQP1|P22415-2 Upstream stimulatory factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12193.12193.3 16.77 15.09 99 1 1 1 0 667.3502 1920.0703 S309s TMT10 298 (R) HHGLEVVIKNDsN (-) HHGLEVVIKNDS(1.0)N K:TMT10,s:Phosphorylated S USF1 33651.6 2 3 3527.1 49 HUMAN 1 14.5745 18.6064 EVVPCIPSPAAPSDK-p Q8IX21-2;S568-p EVVPCIPSPAAPSDK 0.220303665949141 0.0194108496572423 0.223666666666667 -0.348666666666667 12.6507983658133 23.5174328293131 0.223666666666667 -0.348666666666667 0.0543150474679036 0.00444894172440651 2.44832892311365 -4.67243844727531 Q8IX21 SLF2 Q8IX21.2.S568.p_SLF2 Q8IX21-2_S568s_1_1_568_568 Q8IX21-2 Q8IX21-2 Isoform 2 of SMC5-SMC6 complex localization factor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21549.21549.5 9.66 9.66 0 9 1 1 0 952.4832 4677.4397 S568s N587n TMT10 555 (K) SPPAALEVVPCIPsPAAPSDKAPSEGESSGNSnAGSSALKR (K) S(0.0)PPAALEVVPCIPS(0.99)PAAPS(0.0)DKAPS(0.0)EGES(0.0)S(0.0)GN(0.50)S(0.0)N(0.50)AGS(0.0)S(0.0)ALKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated SLF2 134456.8 1 9 1220.1 164.91 HUMAN 1 12.6508 -23.5174 EVVRSKLSPSPSLRK-p Q5T200;S207-p EVVRSKLSPSPSLRK 0.610776928603842 0.141566225111656 0.0756666666666667 0.169666666666667 3.96580173881049 11.1884208555919 0.0756666666666667 0.169666666666667 0.401254416977258 0.0760602790539324 0.910586926032726 2.1881464155719 Q5T200 ZC3H13 Q5T200.S207.p_ZC3H13 Q5T200_S207s _1_1_207_207 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10809.10809.2 10.34 6.24 1.688 4 1 1 0 805.4579 1529.9415 S207s TMT10 204 (R) SKLsPSPSLR (K) S(0.0)KLS(0.99)PS(0.0)PS(0.0)LR K:TMT10,s:Phosphorylated S ZC3H13 197316.7 7 5 24.1 987.82 HUMAN 1 3.9658 11.1884 EVYELLDSPGKVLLQ-p P22234-2;S27-p EVYELLDSPGKVLLQ 0.852077310598031 0.00929166830878165 0.0376666666666666 -0.926666666666667 1.34676385303722 28.6896302834239 0.0376666666666667 -0.926666666666667 0.733370801115582 0.00135218767055525 0.358732931470876 -6.03411924206866 P22234 PAICS P22234.2.S27.p_PAICS P22234-2_S27s _1_1_27_27 P22234-2 P22234-2 Isoform 2 of Multifunctional protein ADE2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28065.28065.5 19.29 17.4 5.006 4 1 1 0 629.5685 3063.8475 S27s TMT10 18 (K) TKEVYELLDsPGKVLLQSK (D) T(0.0)KEVY(0.0)ELLDS(0.99)PGKVLLQS(0.0)K K:TMT10,s:Phosphorylated S PAICS 48699 16 1 991.1 191.33 HUMAN 1 1.3468 -28.6896 EWDTGYDSDERRDAP-p Q8WU20;S292-p EWDTGYDSDERRDAP 0.771638354290043 0.149398670142356 -0.046 0.155666666666667 2.15702156461718 10.8667130664345 -0.046 0.155666666666667 0.608552209445897 0.0819084473118067 -0.543301474412525 2.13182688117857 Q8WU20 FRS2 Q8WU20.S292.p_FRS2 Q8WU20_S292s _1_1_292_292 Q8WU20 Q8WU20 Fibroblast growth factor receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15743.15743.5 27.86 27.86 1.238 7 1 1 0 999.0874 4911.4348 S292s TMT10 266 (K) EKLEQLGRDQVSGSGANNTEWDTGYDsDERRDAPSVNK (L) EKLEQLGRDQVS(0.0)GS(0.0)GANNT(0.0)EWDT(0.0)GY(0.0)DS(0.99)DERRDAPS(0.0)VNK K:TMT10,s:Phosphorylated S FRS2 57427.4 13 9 301.1 376.53 HUMAN 1 -2.157 10.8667 EWEKAAPTPPALPGD-p Q76L82;T931-p EWEKAAPTPPALPGD 0.6705604621194 0.676013972207045 0.123 0.12 3.24977341609595 2.32382745940405 0.123 0.12 0.473175945265512 0.585621825521738 0.770703157050185 0.579307485873487 Q76L82 NotFound Q76L82.T931.p_NotFound Q76L82_T931t _1_1_931_931 Q76L82 Q8IXJ9|Q76L82 Additional sex combs like 1 (Drosophila), isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37732.37732.3 24.46 21.29 4.614 7 1 1 0 1232.9587 3616.8948 T931t TMT10 928 (K) AAPtPPALPGDLTAEEGLDPLDSLTSLWTVPSR (G) AAPT(0.99)PPALPGDLT(0.0)AEEGLDPLDS(0.0)LT(0.0)S(0.0)LWT(0.0)VPS(0.0)R t:Phosphorylated T ASXH1 166293.4 2 3 3436.1 51.1 HUMAN 1 3.2498 2.3238 EWGLLDRSQKELYWD-p Q9NWS9;S218-p EWGLLDRSQKELYWD 0.599963202704045 0.126044220390683 -0.148333333333333 -0.222333333333333 4.09763474418609 11.8609116516823 -0.148333333333333 -0.222333333333333 0.389257084577292 0.0651491621479162 -0.935747151643141 -2.30655304036558 Q9NWS9 ZNF446 Q9NWS9.S218.p_ZNF446 Q9NWS9_S218s _1_1_218_218 Q9NWS9 Q9NWS9|Q9NWS9-2|M0R202 Zinc finger protein 446 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21675.21675.3 17.76 17.76 99 1 1 1 0 714.0443 2060.1541 S218s TMT10 208 (R) IQEEWGLLDRsQK (E) IQEEWGLLDRS(1.0)QK K:TMT10,s:Phosphorylated S ZNF446 49754.9 2 2 2353.1 86.88 HUMAN 1 -4.0976 -11.8609 EWKSMFGSLDPPNMP-p Q99570;S865-p EWKSMFGSLDPPNMP 0.085342532597937 0.00752314179680432 0.363666666666667 0.517666666666667 22.8825638638923 30.3461161543147 0.363666666666667 0.517666666666667 0.0051492456835473 0.000923396841213115 4.5267202823531 6.52762110069027 Q99570 PIK3R4 Q99570.S865.p_PIK3R4 Q99570_S865s _1_1_865_865 Q99570 Q99570 Phosphoinositide 3-kinase regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29422.29422.4 16.66 16.66 4.348 2 1 1 0 592.8024 2288.2183 S865s TMT10 861 (K) SMFGsLDPPNMPQALPK (G) S(0.0)MFGS(0.99)LDPPNMPQALPK K:TMT10,s:Phosphorylated S PIK3R4 154412.9 7 3 2103.1 97.58 HUMAN 1 22.8826 30.3461 EWQSLAGSPSSKL__-p Q08426;S718-p EWQSLAGSPSSKL__ 0.666639852843335 0.799635217378837 0.0583333333333333 0.0293333333333334 3.29072732031171 1.35756824530656 0.0583333333333333 0.0293333333333334 0.468734875749491 0.731548586443006 0.77886826968996 0.361275105773482 Q08426 EHHADH Q08426.S718.p_EHHADH Q08426_S718s _1_1_718_718 Q08426 Q08426|Q08426-2 Peroxisomal bifunctional enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23124.23124.3 16.5 16.5 4.881 4 1 1 0 643.3366 1848.0267 S718s TMT10 711 (K) EWQSLAGsPSSKL (-) EWQS(0.0)LAGS(0.99)PS(0.0)S(0.0)KL K:TMT10,s:Phosphorylated S EHHADH 80121 4 4 2380.1 85.83 HUMAN 1 3.2907 1.3576 EWQVERESISRLMQN-p Q13206;S52-p EWQVERESISRLMQN 0.284566041953041 0.0364368427337184 -0.232333333333333 -0.288666666666667 10.300255145308 19.354199979112 -0.232333333333333 -0.288666666666667 0.093319947429757 0.0116032594198016 -2.03392673755088 -3.73835011404853 Q13206 DDX10 Q13206.S52.p_DDX10 Q13206_S52s _1_1_52_52 Q13206 Q13206|E9PIF2 Probable ATP-dependent RNA helicase DDX10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11215.11215.3 10.51 5.96 9.072 2 1 1 0 728.0512 2102.1759 S52s TMT10 43 (K) KPEWQVEREsISR (L) KPEWQVERES(0.99)IS(0.0)R K:TMT10,s:Phosphorylated S DDX10 101228.5 1 2 1925.1 106.76 HUMAN 1 -10.3003 -19.3542 EWRDRPGSPESPLLD-p Q8TF72;S910-p EWRDRPGSPESPLLD 0.766639660683389 0.027409091034532 0.0523333333333333 0.317 2.21348312386989 21.1891060898458 0.0523333333333333 0.317 0.600691778073744 0.0076048279132392 0.555577025897574 4.13475475666494 Q8TF72 SHROOM3 Q8TF72.S910.p_SHROOM3 Q8TF72_S910s _1_1_910_910 Q8TF72 Q8TF72 Protein Shroom3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19863.19863.2 14.95 6.78 2.326 3 1 1 0 1075.5296 2070.0817 S910s TMT10 906 (R) DRPGsPESPLLDAPFSR (A) DRPGS(0.99)PES(0.0)PLLDAPFS(0.0)R s:Phosphorylated S SHROOM3 218451.1 5 40 90.2 622.62 HUMAN 1 2.2135 21.1891 EWRVRAISAANLHLR-p Q6P2Q9;S2079-p EWRVRAISAANLHLR 0.984856677723395 0.117316132236844 -0.00500000000000001 -0.229333333333333 0.134388539205704 12.2704112655504 -0.00500000000000004 -0.229333333333333 0.969529763714218 0.0592869178756254 -0.0399970126718942 -2.37917315108174 Q6P2Q9 PRPF8 Q6P2Q9.S2079.p_PRPF8 Q6P2Q9_S2079s _1_1_2079_2079 Q6P2Q9 Q6P2Q9 Pre-mRNA-processing-splicing factor 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14677.14677.3 11.44 11.44 99 1 1 1 0 458.9195 1294.7793 S2079s TMT10 2077 (R) AIsAANLHLR (T) AIS(1.0)AANLHLR s:Phosphorylated S PRPF8 274907.6 4 3 3766.1 43.6 HUMAN 1 -0.1344 -12.2704 EYDESGKSRGEMQYM-p Q96K76;S1025-p EYDESGKSRGEMQYM 0.419074602958442 0.00292573679022132 -0.393333333333333 0.958 6.97272347980555 38.2378636838436 -0.393333333333333 0.958 0.200783329663095 0.000150042271940122 -1.45623775257686 9.36634137174835 Q96K76 USP47 Q96K76.S1025.p_USP47 Q96K76_S1025s _1_1_1025_1025 Q96K76 Q96K76|Q96K76-4|Q96K76-2 Ubiquitin carboxyl-terminal hydrolase 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19283.19283.3 9.51 9.39 4.308 3 1 1 0 659.9855 1897.9705 S1025s TMT10 1025 (K) sRGEMQYMYFK (A) S(0.99)RGEMQY(0.0)MY(0.0)FK K:TMT10,s:Phosphorylated S USP47 158677.8 1 9 770.1 227.83 HUMAN 1 -6.9727 38.2379 EYDSVSESEDEEMLE-p Q9BZE4;S472-p EYDSVSESEDEEMLE 0.405353029750668 0.0820145623344482 0.144833333333333 0.2315 7.2424285380845 14.3969905998943 0.144833333333333 0.2315 0.18869358953981 0.0363329733259895 1.50338587774637 2.76438701595452 Q9BZE4 GTPBP4 Q9BZE4.S472.p_GTPBP4 Q9BZE4_S470sS472s_2_2_470_472 Q9BZE4 Q9BZE4|Q9BZE4-2|Q9BZE4-3 Nucleolar GTP-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23766.23766.3 13.35 13.35 1.249 5 2 2 0 917.0335 2589.1711 S470s S472s TMT10 461 (R) TAAGEYDSVsEsEDEEMLEIR (Q) T(0.0)AAGEY(0.0)DS(0.0)VS(0.99)ES(0.99)EDEEMLEIR s:Phosphorylated S GTPBP4 74362.6 7 4 3169.1 58.8 HUMAN 2 7.2424 14.397 EYGKAGGSPASYHGS-p O95208-2;S192-p EYGKAGGSPASYHGS 0.0694588020529118 0.0330717714771588 0.475 0.285 24.9727530753445 19.9617426441515 0.475 0.285 0.00318217963799334 0.0100884799586988 5.03687927705996 3.86713493103807 O95208 EPN2 O95208.2.S192.p_EPN2 O95208-2_S192sS195s_2_2_192_195 O95208-2 O95208-2|I3L2B2|O95208-3 Isoform 2 of Epsin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5289.5289.2 12.03 12.03 1.232 6 2 2 0 910.8821 1660.8241 S192s S195s TMT10 189 (K) AGGsPAsYHGSTSPR (V) AGGS(0.99)PAS(0.99)Y(0.0)HGS(0.0)T(0.0)S(0.0)PR s:Phosphorylated S EPN2 62355.6 3 7 1459.1 140.33 HUMAN 1 24.9728 19.9617 EYGLRLGSQIFVKEM-p A0A1B0GTW1;S384-p EYGLRLGSQIFVKEM 0.874719079307114 0.0175936501308428 -0.0256666666666667 -0.374 1.13734165772989 24.1806507104566 -0.0256666666666667 -0.374 0.769601373704628 0.0038188704779832 -0.307982985285399 -4.83343273789469 A0A1B0GTW1 NotFound A0A1B0GTW1.S384.p_NotFound A0A1B0GTW1_S384s _1_1_384_384 A0A1B0GTW1 A0A1B0GTW1 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24286.24286.2 13.2 6.46 99 1 1 1 0 715.4149 1349.8557 S384s TMT10 382 (R) LGsQIFVK (E) LGS(1.0)QIFVK K:TMT10,s:Phosphorylated S TJP2 141123.7 1 9 41.1 827.72 HUMAN 1 -1.1373 -24.1807 EYGPHADSPVLMVYG-p P14866;S381-p EYGPHADSPVLMVYG 0.38300990372311 0.406773372904139 0.142333333333333 0.0843333333333334 7.71682322376784 5.19991689501071 0.142333333333333 0.0843333333333334 0.169167790732574 0.302000950963654 1.58599511358112 1.14033254402371 P14866 HNRNPL P14866.S381.p_HNRNPL P14866_S381s _1_1_381_381 P14866 P14866|P14866-2 Heterogeneous nuclear ribonucleoprotein L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24632.24632.4 18.39 18.39 2.313 6 1 1 0 1081.5272 4243.1363 S381s TMT10 359 (R) YGPQYGHPPPPPPPPEYGPHADsPVLMVYGLDQSK (M) Y(0.0)GPQY(0.0)GHPPPPPPPPEY(0.0)GPHADS(0.99)PVLMVY(0.0)GLDQS(0.0)K K:TMT10,s:Phosphorylated S HNRNPL 64759.2 1 6 846.1 213.74 HUMAN 1 7.7168 5.1999 EYIEHCNTPTTDSDS-p Q9NVR5;T703-p EYIEHCNTPTTDSDS 0.610403502724566 0.0540543139764796 0.102333333333333 -0.275333333333333 3.97120946500898 16.8922110333999 0.102333333333333 -0.275333333333333 0.400755095954902 0.0204540303798724 0.911622270279597 -3.23898634143692 Q9NVR5 DNAAF2 Q9NVR5.T703.p_DNAAF2 Q9NVR5_T703t _1_1_703_703 Q9NVR5 Q9NVR5|Q9NVR5-2 Protein kintoun HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14132.14132.3 19.52 18.08 1.2 7 1 1 0 935.7717 2725.3391 T703t TMT10 696 (K) EYIEHCNtPTTDSDSSIAVK (A) EY(0.0)IEHCNT(0.99)PT(0.0)T(0.0)DS(0.0)DS(0.0)S(0.0)IAVK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T DNAAF2 91968.6 1 3 2831.1 68.73 HUMAN 1 3.9712 -16.8922 EYIEREESDGEYDEF-p O95218-2;S120-p EYIEREESDGEYDEF 0.391178814803887 0.0573653469568078 0.149 0.287666666666667 7.5266286393657 16.5402361271279 0.149 0.287666666666667 0.176740930068724 0.0221807581911732 1.55291767479194 3.17028641485108 O95218 ZRANB2 O95218.2.S120.p_ZRANB2 O95218-2_S120s _1_1_120_120 O95218-2 O95218|O95218-2 Isoform 2 of Zinc finger Ran-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14114.14114.2 23.87 23.87 6.036 3 1 1 0 1273.0087 2465.0375 S120s Hydrogen 110 (R) ENVEYIEREEsDGEYDEFGR (K) ENVEY(0.0)IEREES(0.99)DGEY(0.0)DEFGR s:Phosphorylated S ZRANB2 36774.1 37 1 212.1 438.05 HUMAN 1 7.5266 16.5402 EYINECDSDYHEERT-p Q93008;S866-p EYINECDSDYHEERT 0.170677699585152 0.113753080264986 0.233333333333333 0.167666666666667 15.3192761367583 12.4501261221569 0.233333333333333 0.167666666666667 0.0293813932749573 0.0568836411196502 2.9385489405613 2.41118187473387 Q93008 USP9X Q93008.S866.p_USP9X Q93008_S866s _1_1_866_866 Q93008 Q93008 Probable ubiquitin carboxyl-terminal hydrolase FAF-X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8395.8395.3 16.14 16.14 3.328 3 1 1 0 723.2872 2087.8814 S866s TMT10 859 (R) EYINECDsDYHEER (T) EY(0.0)INECDS(0.99)DY(0.0)HEER C:Carbamidomethylation,s:Phosphorylated S USP9X 295697.8 1 2 1218.1 165.22 HUMAN 1 15.3193 12.4501 EYKGETKSFYPEEVS-p P11142;S113-p EYKGETKSFYPEEVS 0.3097496451172 0.0388611853070016 -0.147666666666667 -0.279666666666667 9.5196041315221 18.9381251485011 -0.147666666666667 -0.279666666666667 0.111696505683491 0.0127698996705683 -1.89835598130788 -3.65148766493743 P11142 HSPA8 P11142.S113.p_HSPA8 P11142_S113s _1_1_113_113 P11142 P11142|E9PKE3|P11142-2 Heat shock cognate 71 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30407.30407.3 15.86 13.2 3.05 5 1 1 0 719.0308 2075.1135 S113s TMT10 113 (K) sFYPEEVSSMVLTK (M) S(0.99)FY(0.0)PEEVS(0.0)S(0.0)MVLT(0.0)K K:TMT10,s:Phosphorylated S HSPA8 71125 3 11 367.1 341.38 HUMAN 1 -9.5196 -18.9381 EYKSKRQTSGGPVDA-p A8MUH2;T56-p EYKSKRQTSGGPVDA 0.991883667014353 0.34566460361919 -0.00166666666666667 0.128 0.0751744920236331 6.11453076049592 -0.00166666666666667 0.128 0.982839383417422 0.244650959829854 -0.0225211701476695 1.30462476926735 A8MUH2 NotFound A8MUH2.T56.p_NotFound A8MUH2_T56t _1_1_56_56 A8MUH2 A8MUH2|P18859-2 ATP synthase-coupling factor 6, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23812.23812.4 20.27 20.27 1.221 5 1 1 0 823.9122 3212.6588 T56t TMT10 54 (K) RQtSGGPVDASSEYQQELERELFK (L) RQT(0.99)S(0.0)GGPVDAS(0.0)S(0.0)EY(0.0)QQELERELFK K:TMT10,t:Phosphorylated T ATP5J 13953.7 1 1 4181.1 35.89 HUMAN 1 -0.0752 6.1145 EYNKLCESLEELQNL-p A0A0U1RRH6;S664-p EYNKLCESLEELQNL 0.14685232684758 0.0510454696665152 -0.299666666666667 -0.3 16.9214311005711 17.2544281737781 -0.299666666666667 -0.3 0.0203168741271594 0.018817294531857 -3.24717595340037 -3.31034601391042 A0A0U1RRH6 NotFound A0A0U1RRH6.S664.p_NotFound A0A0U1RRH6_S664s _1_1_664_664 A0A0U1RRH6 A0A0U1RRH6|O94880|O94880-2 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24174.24174.3 16.64 13.63 99 1 1 1 0 729.0381 2105.1313 S664s TMT10 661 (K) LCEsLEELQNLNGK (L) LCES(1.0)LEELQNLNGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PHF14 109152.4 1 15 126.1 543.2 HUMAN 1 -16.9214 -17.2544 EYNVRVASRYFKGPE-p P68400;S194-p EYNVRVASRYFKGPE 0.210966553981742 0.00450415315840474 -0.549333333333333 0.996666666666667 13.0458332448979 34.4201551808394 -0.549333333333333 0.996666666666667 0.0495925769092599 0.000361396949078378 -2.51932911774601 7.88317366119386 P68400 CSNK2A1 P68400.S194.p_CSNK2A1 P68400_S194s _1_1_194_194 P68400 P68400|Q8NEV1|E7EU96|P19784|P68400-2 Casein kinase II subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13067.13067.3 8.12 8.12 8.118 2 1 1 0 470.2635 1328.8091 S194s TMT10 192 (R) VAsRYFK (G) VAS(0.99)RY(0.0)FK K:TMT10,s:Phosphorylated S CSNK2A1 45256.9 2 4 2696.1 73.72 HUMAN 1 -13.0458 34.4202 EYPDMPRSLPSHMEE-p Q5THJ4;S1724-p EYPDMPRSLPSHMEE 0.341170027199715 0.302436677625131 -0.222666666666667 -0.262666666666667 8.68350234067532 6.85661558848466 -0.222666666666667 -0.262666666666667 0.135409696888523 0.206223636649341 -1.75357648039491 -1.43550196168822 Q5THJ4 VPS13D Q5THJ4.S1724.p_VPS13D Q5THJ4_S1709sS1724s_2_2_1709_1724 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27509.27509.4 16.24 16.24 1.614 12 2 2 0 1369.3716 5313.5241 S1709s N1715n S1724s TMT10 1704 (K) EYLSQsCPSVSnVEYPDMPRsLPSHMEEAPNVFQLYQRPTSASR (K) EY(0.0)LS(0.0)QS(0.99)CPS(0.0)VS(0.0)N(0.99)VEY(0.0)PDMPRS(0.99)LPS(0.0)HMEEAPN(0.0)VFQLY(0.0)QRPT(0.0)S(0.0)AS(0.0)R C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated VPS13D 495672.3 1 28 124.1 545.31 HUMAN 1 -8.6835 -6.8566 EYPSPPPSPLRRGPQ-p Q9HCD6-2;S1544-p EYPSPPPSPLRRGPQ 0.772184255224755 0.636769170337094 0.0403333333333333 0.053 2.14635496638124 2.66783011833133 0.0403333333333333 0.053 0.610048696308972 0.541024569545221 0.540974870367545 0.652011922521632 Q9HCD6 TANC2 Q9HCD6.2.S1544.p_TANC2 Q9HCD6-2_S1544s _1_1_1544_1544 Q9HCD6-2 Q9HCD6-2 Isoform 2 of Protein TANC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10681.10681.3 7.03 7.03 2.4 3 1 1 0 568.9611 1624.9009 S1544s TMT10 1537 (K) EYPSPPPsPLRR (G) EY(0.0)PS(0.0)PPPS(0.99)PLRR s:Phosphorylated S TANC2 222282.4 1 10 348.1 351.89 HUMAN 1 2.1464 2.6678 EYQNKLIYLVPEKQL-p Q9NZM3;Y553-p EYQNKLIYLVPEKQL 0.332256356782789 0.320919199398716 -0.143333333333333 -0.109 8.93854332949625 6.52638932939356 -0.143333333333333 -0.109 0.127686701195417 0.222515909159016 -1.79772430192938 -1.37747281408152 Q9NZM3 ITSN2 Q9NZM3.Y553.p_ITSN2 Q9NZM3_Y553y _1_1_553_553 Q9NZM3 Q9NZM3|A0A087WVF7|Q9NZM3-2|Q9NZM3-3|Q9NZM3-4 Intersectin-2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.34135.34135.2 12.67 12.67 99 1 1 1 0 756.9386 1432.918 Y553y TMT10 551 (K) LIyLVPEK (Q) LIY(1.0)LVPEK K:TMT10,y:Phosphorylated Y ITSN2 194542 2 1 278.1 12.67 HUMAN 1 -8.9385 -6.5264 EYRAKFLSPAQYLYK-p Q8TC05;S314-p EYRAKFLSPAQYLYK 0.445972173170048 0.0515355492111663 0.106 0.253333333333333 6.4677686289703 17.1901222407365 0.106 0.253333333333333 0.225539772019285 0.0190979950274086 1.36748800207379 3.29762732982483 Q8TC05 MDM1 Q8TC05.S314.p_MDM1 Q8TC05_S314s _1_1_314_314 Q8TC05 Q8TC05|Q8TC05-4 Nuclear protein MDM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29632.29632.2 15.34 11.49 5.631 3 1 1 0 884.4785 1687.9824 S314s TMT10 312 (K) FLsPAQYLYK (A) FLS(0.99)PAQY(0.0)LY(0.0)K K:TMT10,s:Phosphorylated S MDM1 81019 4 4 1888.1 108.98 HUMAN 1 6.4678 17.1901 EYREKSESGGSEYGT-p Q12873-3;S149-p EYREKSESGGSEYGT 0.34935789310395 0.0126876261348301 -0.275666666666667 0.454 8.4838113131593 26.4434996694385 -0.275666666666667 0.454 0.141781272113966 0.00226803646649542 -1.71900336614619 5.41164054410205 Q12873 CHD3 Q12873.3.S149.p_CHD3 Q12873-3_S149s _1_1_149_149 Q12873-3 Q12873-3 Isoform 3 of Chromodomain-helicase-DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5668.5668.2 13.98 13.98 2.176 5 1 1 0 825.3536 1569.7342 S149s TMT10 147 (K) SEsGGSEYGTGPGR (K) S(0.0)ES(0.99)GGS(0.0)EY(0.0)GT(0.0)GPGR s:Phosphorylated S CHD3 234573.2 2 42 49.3 753.68 HUMAN 1 -8.4838 26.4435 EYRKKWDSNVIETFD-p Q9Y365;S97-p EYRKKWDSNVIETFD 0.0797758849663293 0.0341637378727217 -0.539333333333333 0.339666666666667 23.4506015953207 19.7571381359756 -0.539333333333333 0.339666666666667 0.00451793356521197 0.0105751414821543 -4.6617645445567 3.82349989172706 Q9Y365 STARD10 Q9Y365.S97.p_STARD10 Q9Y365_S97s _1_1_97_97 Q9Y365 Q9Y365|F5H8H3|F5GY11 START domain-containing protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27349.27349.3 11.05 11.05 2.644 2 1 1 0 744.7215 2152.1803 S97s TMT10 94 (K) KWDsNVIETFDIAR (L) KWDS(0.99)NVIET(0.0)FDIAR K:TMT10,s:Phosphorylated S STARD10 33447.5 1 3 2136.1 96.25 HUMAN 1 -23.4506 19.7571 EYRLCNGSDKECVSP-p Q9H0X9-3;S34-p EYRLCNGSDKECVSP 0.614617666332898 0.00644573970859728 0.0763333333333333 -0.522 3.92347453823241 31.5002354331413 0.0763333333333334 -0.522 0.405184241332894 0.000707907407340639 0.902473168982361 -6.89023512772804 Q9H0X9 OSBPL5 Q9H0X9.3.S34.p_OSBPL5 Q9H0X9-3_S34s_1_1_34_34 Q9H0X9-3 Q9H0X9|Q9H0X9-2|Q9H0X9-3|E9PRA9 Isoform 3 of Oxysterol-binding protein-related protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10815.10815.3 13.43 10.08 4.789 3 1 1 0 745.0162 2152.0891 N32n S34s TMT10 30 (R) LCnGsDKECVSPTAR (V) LCN(1.0)GS(0.99)DKECVS(0.0)PT(0.0)AR C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S OSBPL5 89402.9 3 1 2965.1 64.51 HUMAN 1 3.9235 -31.5002 EYWTYHGSPKVPRAR-p O94929;S493-p EYWTYHGSPKVPRAR 0.989669009084524 0.423160718633893 -0.00233333333333334 0.0993333333333334 0.0919768615780844 4.97272198852984 -0.00233333333333335 0.0993333333333334 0.979044233604173 0.318220241612819 -0.0275031844560069 1.09883581383798 O94929 ABLIM3 O94929.S493.p_ABLIM3 O94929_S493s _1_1_493_493 O94929 O94929|A0A0C4DGA7|O94929-3|O94929-2 Actin-binding LIM protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25080.25080.4 17.37 17.37 1.119 12 1 1 0 882.1547 3445.6305 S493s TMT10 471 (K) YSPIYSPDPYYASESEYWTYHGsPK (V) Y(0.0)S(0.0)PIY(0.0)S(0.0)PDPY(0.0)Y(0.0)AS(0.0)ES(0.0)EY(0.0)WT(0.0)Y(0.0)HGS(0.99)PK K:TMT10,s:Phosphorylated S ABLIM3 79511.8 1 3 2058.1 100.14 HUMAN 1 -0.092 4.9727 EYYSFHESDLDLPEM-p Q8NAX2;S222-p EYYSFHESDLDLPEM 0.470110243897234 0.0364204913303259 0.111333333333333 0.284666666666667 6.05063581569518 19.35785236149 0.111333333333333 0.284666666666667 0.248276959631671 0.0115935052721987 1.29357892769204 3.73911734617073 Q8NAX2 KDF1 Q8NAX2.S222.p_KDF1 Q8NAX2_S218sS222s_2_2_218_222 Q8NAX2 Q8NAX2 Keratinocyte differentiation factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27447.27447.3 13.36 13.36 3.096 9 2 2 0 1096.0989 3126.3506 S218s S222s TMT10 212 (R) GSEEYYsFHEsDLDLPEMGSGSMSSR (E) GS(0.0)EEY(0.0)Y(0.0)S(0.99)FHES(0.99)DLDLPEMGS(0.0)GS(0.0)MS(0.0)S(0.0)R s:Phosphorylated S KDF1 44496.8 3 7 2331.1 87.55 HUMAN 1 6.0506 19.3579 FADDFVRSSKQHYNC-p P50454;S149-p FADDFVRSSKQHYNC 0.142083819196639 0.266488361814102 -0.381333333333333 -0.114666666666667 17.3240490797661 7.56180523077023 -0.381333333333333 -0.114666666666667 0.0185180431621679 0.17531516182768 -3.3267340735778 -1.55857343996998 P50454 SERPINH1 P50454.S149.p_SERPINH1 P50454_S149s _1_1_149_149 P50454 P50454|E9PPV6 Serpin H1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24701.24701.3 14.48 14.48 1.15 6 1 1 0 834.0897 2420.2862 S149s TMT10 134 (R) LYGPSSVSFADDFVRsSK (Q) LY(0.0)GPS(0.0)S(0.0)VS(0.0)FADDFVRS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S SERPINH1 46553.8 2 4 3277.1 55.21 HUMAN 1 -17.324 -7.5618 FADEEKESPVEFTGH-p Q5SY16;S487-p FADEEKESPVEFTGH 0.660432302611961 0.00564587648094507 0.069 0.664 3.3720615464265 32.5812130810787 0.069 0.664 0.460038146876008 0.000551923253308085 0.795020090489626 7.24475916936283 Q5SY16 NOL9 Q5SY16.S487.p_NOL9 Q5SY16_S487s _1_1_487_487 Q5SY16 Q5SY16 Polynucleotide 5'-hydroxyl-kinase NOL9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31913.32120.4 28.24 23.19 4.472 2 1 1 0 880.4483 3438.8036 S487s TMT10 471 (R) LAAFADALEFADEEKEsPVEFTGHK (L) LAAFADALEFADEEKES(0.99)PVEFT(0.0)GHK K:TMT10,s:Phosphorylated S NOL9 80576.5 9 2 3019.1 63.11 HUMAN 1 3.3721 32.5812 FADELDDSKPPPSSS-p Q14118;S807-p FADELDDSKPPPSSS 0.0813892620427899 0.00462437619115908 -0.381333333333333 -0.564333333333333 23.2752055883953 34.1770329672383 -0.381333333333333 -0.564333333333333 0.00470413136557237 0.000382205298416161 -4.61978886738643 -7.79611088210511 Q14118 DAG1 Q14118.S807.p_DAG1 Q14118_S807s _1_1_807_807 Q14118 Q14118 Dystroglycan HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.35317.35317.5 15.85 15.85 2.29 4 1 1 0 784.8188 3840.096 S807s TMT10 795 (K) GVPIIFADELDDsKPPPSSSMPLILQEEK (A) GVPIIFADELDDS(0.99)KPPPS(0.0)S(0.0)S(0.0)MPLILQEEK K:TMT10,s:Phosphorylated S DAG1 97782 2 1 3047.1 62.19 HUMAN 1 -23.2752 -34.177 FAEDEEKSENSSEDG-p Q5C9Z4;S317-p FAEDEEKSENSSEDG 0.249214669457312 0.969138530254666 -0.242 0.00466666666666667 11.5113297864473 0.192351524682847 -0.242 0.00466666666666668 0.0706101316717225 0.956675930652156 -2.24594566738606 0.056882868329003 Q5C9Z4 NOM1 Q5C9Z4.S317.p_NOM1 Q5C9Z4_S317sS320sS321s_3_3_317_321 Q5C9Z4 Q5C9Z4 Nucleolar MIF4G domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13021.13223.3 13.7 13.7 6.565 4 3 3 0 981.7178 2703.2521 S317s S320s S321s Hydrogen 310 (R) FAEDEEKsENssEDGDITDK (S) FAEDEEKS(0.99)ENS(0.99)S(0.99)EDGDIT(0.0)DK K:TMT10-Lys-Only,s:Phosphorylated S NOM1 96826.2 3 7 2040.1 101.14 HUMAN 1 -11.5113 0.1924 FAEEPMQSDSEDGEE-p P31323;S83-p FAEEPMQSDSEDGEE 0.300634445803794 0.0326902581920266 0.168666666666667 0.282333333333333 9.80285230749272 20.046037591345 0.168666666666667 0.282333333333333 0.104644105324099 0.0098945544063677 1.94747864462234 3.88519128212778 P31323 PRKAR2B P31323.S83.p_PRKAR2B P31323_S83sS85s_2_2_83_85 P31323 P31323 cAMP-dependent protein kinase type II-beta regulatory subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26567.26567.4 26.25 26.25 99 2 2 2 0 1042.9349 3992.793 M81m S83s S85s TMT10 73 (K) GVNFAEEPmQsDsEDGEEEEAAPADAGAFNAPVINR (F) GVNFAEEPM(1.0)QS(1.0)DS(1.0)EDGEEEEAAPADAGAFNAPVINR m:Oxidized methionine,s:Phosphorylated S PRKAR2B 46700.6 4 3 3065.1 61.65 HUMAN 1 9.8029 20.046 FAEKLKMSPGRSRGP-p Q9UGU0;S1019-p FAEKLKMSPGRSRGP 0.418102598248955 0.0271261454974297 -0.133 -0.288333333333333 6.98922517532916 21.257030930092 -0.133 -0.288333333333333 0.200021869676608 0.00748681164172265 -1.4591270043928 -4.14986905795424 Q9UGU0 TCF20 Q9UGU0.S1019.p_TCF20 Q9UGU0_S1019s _1_1_1019_1019 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9293.9499.3 7.54 2.29 99 1 1 1 0 442.9169 1246.7706 S1019s TMT10 1016 (K) LKMsPGR (S) LKMS(1.0)PGR K:TMT10,s:Phosphorylated S TCF20 213250.7 4 15 197.1 457.96 HUMAN 1 -6.9892 -21.257 FAEKNNLSFIETSAL-p Q15907;S149-p FAEKNNLSFIETSAL 0.955641444333664 0.361370410321024 0.0123333333333333 0.0896666666666667 0.387654726546815 5.86422220559158 0.0123333333333333 0.0896666666666667 0.91460701345466 0.259165852971917 0.112335533868197 1.26004446980787 Q15907 RAB11B Q15907.S149.p_RAB11B Q15907_S149s _1_1_149_149 Q15907 Q15907|Q15907-2|M0R2D0 Ras-related protein Rab-11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33555.33555.3 8.34 8.34 1.277 5 1 1 0 956.4697 2787.4453 S149s TMT10 146 (K) NNLsFIETSALDSTNVEEAFK (N) NNLS(0.99)FIET(0.0)S(0.0)ALDS(0.0)T(0.0)NVEEAFK K:TMT10,s:Phosphorylated S RAB11B 24602.2 1 7 2989.1 63.94 HUMAN 1 0.3877 5.8642 FAEVRILSCGELIPK-p Q13427;S173-p FAEVRILSCGELIPK 0.589224306297175 0.0541749804968218 0.0856666666666667 0.23 4.23016742570528 16.8783578839327 0.0856666666666667 0.23 0.377557635347462 0.0205193789285761 0.960878485030641 3.23627060317212 Q13427 PPIG Q13427.S173.p_PPIG Q13427_S173s _1_1_173_173 Q13427 Q13427|E9PG73|Q13427-2 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27297.27297.3 10.97 7.3 99 1 1 1 0 556.6451 1587.9544 S173s TMT10 171 (R) ILsCGELIPK (S) ILS(1.0)CGELIPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PPIG 89129.1 2 1 112.1 571.91 HUMAN 1 4.2302 16.8784 FAFQEDDSFEKENRS-p Q6P444;S328-p FAFQEDDSFEKENRS 0.0506176118125653 0.00556995614729869 -0.857333333333333 -0.824666666666667 28.5106214668051 32.6696918266924 -0.857333333333334 -0.824666666666667 0.00140908714641337 0.000540792695977687 -5.99146802328725 -7.27443882263451 Q6P444 MTFR2 Q6P444.S328.p_MTFR2 Q6P444_S328s _1_1_328_328 Q6P444 Q6P444 Mitochondrial fission regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23298.23298.2 13.05 13.05 99 1 1 1 0 950.9425 1820.9107 S328s TMT10 321 (K) FAFQEDDsFEK (E) FAFQEDDS(1.0)FEK K:TMT10,s:Phosphorylated S MTFR2 43611.5 2 3 4205.1 35.43 HUMAN 1 -28.5106 -32.6697 FAFVTFESPADAKDA-p P38159;S58-p FAFVTFESPADAKDA 0.555882142917004 0.0191359515856252 0.102666666666667 0.366666666666667 4.7083011516792 23.6280799687655 0.102666666666667 0.366666666666667 0.338197104343771 0.00433702577449394 1.05032101498301 4.69904459213013 P38159 RBMX P38159.S58.p_RBMX P38159_S58s _1_1_58_58 P38159 Q8N7X1|O75526|P38159|Q96E39|H3BT71|P38159-3|H3BR27 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29196.29196.2 19.37 19.37 3.499 2 1 1 0 1013.0102 1945.0471 S58s TMT10 50 (R) GFAFVTFEsPADAK (D) GFAFVT(0.0)FES(0.99)PADAK K:TMT10,s:Phosphorylated S RBMX 42331.1 7 2 102.1 595.29 HUMAN 1 4.7083 23.6281 FAGGLHFSGPKVEGG-p Q09666;S5620-p FAGGLHFSGPKVEGG 0.104924988120668 0.233391825078796 -0.539333333333333 -0.217666666666667 20.6346519240383 8.32177042364066 -0.539333333333333 -0.217666666666667 0.00864041908666786 0.147171242903985 -4.01649679143577 -1.69037953901583 Q09666 AHNAK Q09666.S5620.p_AHNAK Q09666_S5620s _1_1_5620_5620 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20085.20085.4 18.4 18.4 99 1 1 1 0 614.3427 2374.385 S5620s TMT10 5613 (K) FAGGLHFsGPKVEGGVK (G) FAGGLHFS(1.0)GPKVEGGVK K:TMT10,s:Phosphorylated S AHNAK 629603.7 6 150 1.1 4313.36 HUMAN 1 -20.6347 -8.3218 FAHFIQPSAQKSPTS-p B7ZLQ5;S112-p FAHFIQPSAQKSPTS 0.954578198037871 0.00191439114034611 0.00866666666666666 -0.832333333333333 0.396233828866621 42.6111658345137 0.00866666666666666 -0.832333333333333 0.912802071752972 5.48129803386793e-05 0.114722190324004 -11.3705452176569 B7ZLQ5 SMARCA1 B7ZLQ5.S112.p_SMARCA1 B7ZLQ5_S112sS116s_2_2_112_116 B7ZLQ5 B7ZLQ5|A0A0A0MRP6|P28370|P28370-2 Probable global transcription activator SNF2L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27614.27614.4 7.36 7.36 1.296 5 2 2 0 887.9586 3387.8702 S112s S116s N122n TMT10 101 (K) QTELFAHFIQPsAQKsPTSPLnMK (L) QT(0.0)ELFAHFIQPS(0.99)AQKS(0.99)PT(0.0)S(0.0)PLN(1.0)MK K:TMT10,s:Phosphorylated S,n:Deamidated SMARCA1 125009.1 19 3 1232.2 163.75 HUMAN 1 0.3962 -42.6112 FAHFPEDTVEQKAES-p Q96CM8-2;T450-p FAHFPEDTVEQKAES 0.0395731079578075 0.00387767561251333 0.627666666666667 0.869 31.5467573474603 35.6530665182934 0.627666666666667 0.869 0.000700364726990659 0.000272077950921698 6.91688516330082 8.33776453692524 Q96CM8 ACSF2 Q96CM8.2.T450.p_ACSF2 Q96CM8-2_T450t_1_1_450_450 Q96CM8-2 Q96CM8-2|Q96CM8-3|E9PF16|Q96CM8-4 Isoform 2 of Acyl-CoA synthetase family member 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24278.24278.5 9.08 3.31 6.083 6 1 1 0 853.833 4168.188 M426m N438n T450t TMT10 424 (K) INmKDLVVAYGTTEnSPVTFAHFPEDtVEQK (A) IN(0.0)M(1.0)KDLVVAY(0.0)GT(0.0)T(0.0)EN(0.99)S(0.0)PVT(0.0)FAHFPEDT(0.99)VEQK K:TMT10,m:Oxidized methionine,n:Deamidated,t:Phosphorylated T ACSF2 71534.2 2 1 6040.1 14.46 HUMAN 1 31.5468 35.6531 FAIRRFQSMPDGFVF-p P30305-3;S151-p FAIRRFQSMPDGFVF 0.407282445515793 0.0014286003693118 -0.116666666666667 -0.985 7.20359804038047 45.9965275588137 -0.116666666666667 -0.985 0.190388273673619 2.51389563637438e-05 -1.49660702379289 -13.1877421063559 P30305 CDC25B P30305.3.S151.p_CDC25B P30305-3_S151s _1_1_151_151 P30305-3 P30305-3 Isoform 2 of M-phase inducer phosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24060.24060.3 9.98 9.98 99 1 1 1 0 666.3434 1917.0457 S151s TMT10 148 (R) RFQsMPDGFVFK (M) RFQS(1.0)MPDGFVFK K:TMT10,s:Phosphorylated S CDC25B 61439.5 2 15 563.2 271.52 HUMAN 1 -7.2036 -45.9965 FAIRRFQSMPVRLLG-p P30305;S151-p FAIRRFQSMPVRLLG 0.706604154820368 0.00193221728558777 -0.059 -1.25733333333333 2.83274839843917 42.5457363997591 -0.059 -1.25733333333333 0.520864981479633 5.56450273264279e-05 -0.686231946976563 -11.3378536884142 P30305 CDC25B P30305.S151.p_CDC25B P30305_S151s _1_1_151_151 P30305 P30305-4|P30305-2|B4DIG0|G8JLH2 M-phase inducer phosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9425.9425.3 11.66 11.66 99 1 1 1 0 443.8946 1249.7037 S151s TMT10 148 (R) RFQsMPVR (L) RFQS(1.0)MPVR s:Phosphorylated S CDC25B 65671 2 4 563.1 271.52 HUMAN 1 -2.8327 -42.5457 FAKEARESPDTQALL-p Q2T9K0;S333-p FAKEARESPDTQALL 0.391761089057335 0.129133338310024 0.267666666666667 0.158 7.5038196443387 11.7160762865097 0.267666666666667 0.158 0.177671609089376 0.067358494418321 1.54894736064902 2.28096677982418 Q2T9K0 TMEM44 Q2T9K0.S333.p_TMEM44 Q2T9K0_S333s_1_1_333_333 Q2T9K0 Q2T9K0 Transmembrane protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27435.27435.5 24.06 21.11 1.349 6 1 1 0 1022.9048 5029.5126 S333s N352n TMT10 329 (K) EAREsPDTQALLTCAEKEEENQEnLDWVPLTTLSHCK (S) EARES(0.99)PDT(0.0)QALLT(0.0)CAEKEEEN(0.0)QEN(0.99)LDWVPLT(0.0)T(0.0)LS(0.0)HCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated TMEM44 53112.8 1 1 4218.1 35.21 HUMAN 1 7.5038 11.7161 FAKELQRSFMALSQD-p Q14444;S115-p FAKELQRSFMALSQD 0.987422290515613 0.922428461683882 0.00266666666666666 -0.0106666666666667 0.11200733668193 0.493426884093588 0.00266666666666666 -0.0106666666666667 0.974539095443429 0.892600881895777 0.0334182849534508 -0.141477403735352 Q14444 CAPRIN1 Q14444.S115.p_CAPRIN1 Q14444_S115s _1_1_115_115 Q14444 Q14444|Q14444-2|G3V153 Caprin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24993.24993.3 14.31 12.12 7.605 2 1 1 0 602.6487 1725.961 S115s TMT10 115 (R) sFMALSQDIQK (T) S(0.99)FMALS(0.0)QDIQK K:TMT10,s:Phosphorylated S CAPRIN1 78536 4 2 1559.1 131.63 HUMAN 1 0.112 -0.4934 FAKKENNSPEHLKDE-p P38398;S114-p FAKKENNSPEHLKDE 0.488613596629468 0.0117297467150433 -0.0916666666666667 -0.428333333333333 5.72898614598924 26.9903733901189 -0.0916666666666667 -0.428333333333333 0.267363049087779 0.00199968993639554 -1.23613038375586 -5.5585231795572 P38398 BRCA1 P38398.S114.p_BRCA1 P38398_S114s _1_1_114_114 P38398 P38398-7|P38398-4|P38398-8|Q5YLB2|P38398-3|P38398-5|P38398-6 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22415.22415.4 19.64 19.64 9.073 4 1 1 0 746.8707 2904.4926 S114s TMT10 111 (K) ENNsPEHLKDEVSIIQSMGYR (N) ENNS(0.99)PEHLKDEVS(0.0)IIQS(0.0)MGY(0.0)R K:TMT10,s:Phosphorylated S BRCA1 210227.6 14 1 106.1 588.91 HUMAN 1 -5.729 -26.9904 FANFANFSK______-p Q14677-3;S642-p FANFANFSK______ 0.185461409283341 0.959833432233205 -0.229333333333333 -0.00599999999999999 14.3775032670001 0.256462242486795 -0.229333333333333 -0.00599999999999999 0.0364963702075697 0.942657171221083 -2.76249613803947 -0.0753251737769725 Q14677 CLINT1 Q14677.3.S642.p_CLINT1 Q14677-3_S642s _1_1_642_642 Q14677-3 Q14677-3|Q14677-2 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25019.25019.2 15.47 15.47 99 1 1 1 0 949.465 1817.9587 S642s TMT10 632 (K) QDAFANFANFsK (-) QDAFANFANFS(1.0)K K:TMT10,s:Phosphorylated S CLINT1 70350.7 2 22 632.1 256.73 HUMAN 1 -14.3775 -0.2565 FANIQENSN______-p Q86WC4;S333-p FANIQENSN______ 0.93931869762336 0.0706315236394914 0.0123333333333333 0.208333333333333 0.530238018331432 15.3017646996629 0.0123333333333334 0.208333333333333 0.885067101738655 0.0295001028443104 0.151503027415835 2.93327983116128 Q86WC4 OSTM1 Q86WC4.S333.p_OSTM1 Q86WC4_S333s _1_1_333_333 Q86WC4 Q86WC4 Osteopetrosis-associated transmembrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14042.14042.2 10.69 10.69 10.685 5 1 1 0 854.3734 1627.7761 S333s TMT10 322 (K) SSTSFANIQENsN (-) S(0.0)S(0.0)T(0.0)S(0.0)FANIQENS(0.99)N s:Phosphorylated S OSTM1 38054.8 4 2 5924.1 15.31 HUMAN 1 0.5302 15.3018 FANKSGQSALYDALF-p P49792;S383-p FANKSGQSALYDALF 0.413611773009594 0.0392218563510824 -0.124 0.323333333333333 7.07063656092742 18.8809869446083 -0.124 0.323333333333333 0.196307252119983 0.0129390176576233 -1.47337219308898 3.63964170262537 P49792 RANBP2 P49792.S383.p_RANBP2 P49792_S383s_1_1_383_383 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31597.31597.4 7.52 7.52 1.172 7 1 1 0 897.2168 3504.8829 N378n S383s TMT10 371 (K) EIVETFAnKSGQsALYDALFSSQSPK (D) EIVET(0.0)FAN(1.0)KS(0.0)GQS(0.99)ALY(0.0)DALFS(0.0)S(0.0)QS(0.0)PK K:TMT10,n:Deamidated,s:Phosphorylated S RANBP2 362585.9 1 6 9.1 1298.62 HUMAN 1 -7.0706 18.881 FANPVEISPPYCSQG-p A0A0C4DFQ2;S168-p FANPVEISPPYCSQG 0.282204641187515 0.992283703517764 0.242333333333333 -0.0013333333333333 10.3885558866689 0.0490313467837776 0.242333333333333 -0.00133333333333327 0.0914417252383148 0.988773606768044 2.04930422253728 -0.0147310539577617 A0A0C4DFQ2 ZBTB34 A0A0C4DFQ2.S168.p_ZBTB34 A0A0C4DFQ2_S168s _1_1_168_168 A0A0C4DFQ2 A0A0C4DFQ2|Q8NCN2 Zinc finger and BTB domain-containing protein 34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25762.25762.3 15.37 12.38 5.511 5 1 1 0 856.3862 2487.1812 S168s TMT10 157 (K) DSSFFANPVEIsPPYCSQGR (Q) DS(0.0)S(0.0)FFANPVEIS(0.99)PPY(0.0)CS(0.0)QGR C:Carbamidomethylation,s:Phosphorylated S ZBTB34 56778.4 1 1 3622.1 46.72 HUMAN 1 10.3886 -0.049 FAPFLNNSPQQNPAA-p E7EW20;S1156-p FAPFLNNSPQQNPAA 0.760244159276569 0.152683743309171 0.054 -0.194 2.28320478535175 10.734505970962 0.054 -0.194 0.591125264657206 0.0844402290913301 0.570644853940957 -2.10873501468638 E7EW20 NotFound E7EW20.S1156.p_NotFound E7EW20_S1156s _1_1_1156_1156 E7EW20 E7EW20|Q9UM54|A0A0D9SGC1|Q9UM54-1|Q9UM54-2 Unconventional myosin-VI HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29517.29517.3 23.87 23.87 6.238 4 1 1 0 1057.5109 3090.5482 S1156s TMT10 1143 (K) SVTDYDFAPFLNNsPQQNPAAQIPAR (Q) S(0.0)VT(0.0)DY(0.0)DFAPFLNNS(0.99)PQQNPAAQIPAR s:Phosphorylated S MYO6 151234.9 4 6 1416.1 144.52 HUMAN 1 2.2832 -10.7345 FAPGGRLSWGKGSSG-p Q04637-9;S1099-p FAPGGRLSWGKGSSG 0.0986992178204749 0.0376414521872441 0.314333333333333 0.421666666666667 21.2875578322658 19.1353186981413 0.314333333333333 0.421666666666667 0.00743437077274535 0.0122030426792056 4.16088559521293 3.69252240341922 Q04637 EIF4G1 Q04637.9.S1099.p_EIF4G1 Q04637-9_S1099s _1_1_1099_1099 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1|Q04637-4|E7EX73|Q04637-5|Q04637-7|Q04637-6 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23749.23749.5 22.88 22.88 9.99 4 1 1 0 662.9657 3230.8253 S1099s TMT10 1079 (K) ITKPGSIDSNNQLFAPGGRLsWGK (G) IT(0.0)KPGS(0.0)IDS(0.0)NNQLFAPGGRLS(0.99)WGK K:TMT10,s:Phosphorylated S EIF4G1 176975.4 12 19 107.1 585.61 HUMAN 1 21.2876 19.1353 FAPLLRLSPPPGDHD-p Q16254;S384-p FAPLLRLSPPPGDHD 0.17311896721872 0.513734548990274 -0.272333333333333 0.0666666666666667 15.1733868737068 3.88123067246205 -0.272333333333333 0.0666666666666666 0.0303851449620739 0.409144702818547 -2.91103372917876 0.89420940203119 Q16254 E2F4 Q16254.S384.p_E2F4 Q16254_S384s _1_1_384_384 Q16254 Q16254 Transcription factor E2F4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.37341.37341.4 26.38 24.09 5.522 4 1 1 0 953.6992 3731.7988 S384s TMT10 383 (R) LsPPPGDHDYIYNLDESEGVCDLFDVPVLNL (-) LS(0.99)PPPGDHDY(0.0)IY(0.0)NLDES(0.0)EGVCDLFDVPVLNL C:Carbamidomethylation,s:Phosphorylated S E2F4 44301.9 2 3 3194.1 58.02 HUMAN 1 -15.1734 3.8812 FAQELSRSLSVGLEK-p Q8N137-2;S78-p FAQELSRSLSVGLEK 0.912946068007014 0.878083176837687 0.0336666666666667 -0.0316666666666666 0.771389968549704 0.79360929870422 0.0336666666666667 -0.0316666666666667 0.837261272023745 0.832988623571371 0.215508178126056 -0.221253671924172 Q8N137 CNTROB Q8N137.2.S78.p_CNTROB Q8N137-2_S78s _1_1_78_78 Q8N137-2 Q8N137-2|Q8N137-3|Q8N137-5|Q8N137-4 Isoform 2 of Centrobin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19188.19188.2 8.92 8.92 8.921 2 1 1 0 685.8899 1290.8033 S78s TMT10 78 (R) sLSVGLEK (N) S(0.99)LS(0.0)VGLEK K:TMT10,s:Phosphorylated S CNTROB 104095 1 2 3172.1 58.74 HUMAN 1 0.7714 -0.7936 FAQGDRKTPNQMKAK-p O75494-3;T92-p FAQGDRKTPNQMKAK 0.720884951384663 0.0645324017613754 0.0566666666666667 0.241333333333333 2.68496734148061 15.8454446300765 0.0566666666666667 0.241333333333333 0.538893897787345 0.0260288833439282 0.655665612247024 3.03645005362898 O75494 SRSF10 O75494.3.T92.p_SRSF10 O75494-3_T92t _1_1_92_92 O75494-3 O75494|O75494-2|O75494-3|O75494-6|O75494-4|Q5JRI1|O75494-5 Isoform 3 of Serine/arginine-rich splicing factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16861.16866.4 13.67 7.26 99 1 1 1 0 725.6413 2819.5805 T92t TMT10 80 (R) QIEIQFAQGDRKtPNQMK (A) Q(0.0)IEIQFAQGDRKT(1.0)PN(0.0)QM(0.0)K K:TMT10,t:Phosphorylated T SRSF10 22336.2 3 12 867.2 210.03 HUMAN 1 2.685 15.8454 FAQRGDLSDVEEEEE-p Q96ST3;S832-p FAQRGDLSDVEEEEE 0.454939501024606 0.0346635457008109 0.101666666666667 0.289666666666667 6.30923798970558 19.6690305845666 0.101666666666667 0.289666666666667 0.233924764553526 0.0107918758744753 1.3394703216565 3.80479270939386 Q96ST3 SIN3A Q96ST3.S832.p_SIN3A Q96ST3_S832s _1_1_832_832 Q96ST3 Q96ST3 Paired amphipathic helix protein Sin3a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22744.22744.3 23.31 23.31 23.314 2 1 1 0 1097.8319 3211.5088 S832s Hydrogen 829 (R) GDLsDVEEEEEEEMDVDEATGAVKK (H) GDLS(0.99)DVEEEEEEEMDVDEAT(0.0)GAVKK K:TMT10-Lys-Only,s:Phosphorylated S SIN3A 145971.2 27 11 501.1 291.36 HUMAN 1 6.3092 19.669 FAQSAPGSPLSSQPV-p Q01167;S428-p FAQSAPGSPLSSQPV 0.364557541647259 0.258094692887334 0.144666666666667 0.112333333333333 8.13200075326727 7.75025431853568 0.144666666666667 0.112333333333333 0.153744619032747 0.167870571190484 1.65805174534012 1.59131633088434 Q01167 FOXK2 Q01167.S428.p_FOXK2 Q01167_S428s _1_1_428_428 Q01167 Q01167|Q01167-2 Forkhead box protein K2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25612.25612.2 13.6 13.6 1.416 5 1 1 0 1246.6575 2412.3448 S428s TMT10 421 (R) FAQSAPGsPLSSQPVLITVQR (Q) FAQS(0.0)APGS(0.99)PLS(0.0)S(0.0)QPVLIT(0.0)VQR s:Phosphorylated S FOXK2 69288.9 5 10 689.1 243.19 HUMAN 1 8.132 7.7503 FAQTLQQSRGFGSFR-p P55072;S765-p FAQTLQQSRGFGSFR 0.30451465433125 0.71519342638969 -0.423666666666667 -0.057 9.67726939229524 2.00386227601056 -0.423666666666667 -0.057 0.10771422492799 0.630396469721322 -1.92569157339999 -0.509597990643688 P55072 VCP P55072.S765.p_VCP P55072_S765s _1_1_765_765 P55072 P55072 Transitional endoplasmic reticulum ATPase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18261.18261.3 12.56 12.56 1.243 3 1 1 0 723.373 2088.1312 S765s TMT10 754 (R) KYEMFAQTLQQsR (G) KY(0.0)EMFAQT(0.0)LQQS(0.99)R K:TMT10,s:Phosphorylated S VCP 90004.9 1 13 803.1 222.64 HUMAN 1 -9.6773 -2.0039 FAQTRGNSLAEQRKT-p Q6ZVM7;S394-p FAQTRGNSLAEQRKT 0.3851629764389 0.423392637589504 -0.143666666666667 -0.109666666666667 7.67032834316423 4.96914089683662 -0.143666666666667 -0.109666666666667 0.170988603630857 0.318482746865466 -1.57791361333812 -1.09817915938218 Q6ZVM7 TOM1L2 Q6ZVM7.S394.p_TOM1L2 Q6ZVM7_S394s _1_1_394_394 Q6ZVM7 Q6ZVM7|Q6ZVM7-5|Q6ZVM7-3|Q6ZVM7-2 TOM1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5218.5218.3 9.97 9.97 99 1 1 1 0 514.2805 1460.8585 S394s TMT10 392 (R) GNsLAEQRK (T) GNS(1.0)LAEQRK K:TMT10,s:Phosphorylated S TOM1L2 55897.7 1 5 2215.1 93.2 HUMAN 1 -7.6703 -4.9691 FARDVRNSEVVAIKK-p Q9UL54;S51-p FARDVRNSEVVAIKK 0.0782221681558717 0.89391332953053 -0.404333333333333 0.0193333333333334 23.6413533698237 0.683171046473382 -0.404333333333333 0.0193333333333334 0.00432379069946371 0.854442604879821 -4.70770060719077 0.192382959350572 Q9UL54 TAOK2 Q9UL54.S51.p_TAOK2 Q9UL54_S51s _1_1_51_51 Q9UL54 Q9UL54|Q9UL54-4|Q9UL54-2 Serine/threonine-protein kinase TAO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13559.13559.3 9.88 6.72 99 1 1 1 0 589.9982 1688.0107 S51s TMT10 47 (R) DVRNsEVVAIK (K) DVRNS(1.0)EVVAIK K:TMT10,s:Phosphorylated S TAOK2 139047.7 1 1 2238.99 92.22 HUMAN 1 -23.6414 0.6832 FARGFLGSLRGGRRR-p Q8IZ41;S74-p FARGFLGSLRGGRRR 0.246863210495205 0.016828133491096 -0.269 -0.344333333333333 11.6160345319414 24.48152646326 -0.269 -0.344333333333333 0.0689281380045385 0.00356325869585486 -2.26440906157387 -4.90769010095795 Q8IZ41 RASEF Q8IZ41.S74.p_RASEF Q8IZ41_S74s _1_1_74_74 Q8IZ41 Q8IZ41|Q8IZ41-2 Ras and EF-hand domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19705.19705.2 7.72 1.29 99 1 1 1 0 529.7845 978.5934 S74s TMT10 70 (R) GFLGsLR (G) GFLGS(1.0)LR s:Phosphorylated S RASEF 83619.4 1 1 1851.1 111.08 HUMAN 1 -11.616 -24.4815 FARPASPSLQLLPWR-p Q8WUF5;S282-p FARPASPSLQLLPWR 0.983466384683462 0.162782199702227 0.00466666666666666 0.269 0.143461821957262 10.3664495953857 0.00466666666666666 0.269 0.96750633599727 0.0919083650322575 0.0426549316108158 2.04459224604012 Q8WUF5 PPP1R13L Q8WUF5.S282.p_PPP1R13L Q8WUF5_S282s _1_1_282_282 Q8WUF5 Q8WUF5 RelA-associated inhibitor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33702.33702.3 15.5 15.5 1.509 2 1 1 0 792.432 2295.3175 S282s TMT10 272 (R) LDVFARPASPsLQLLPWR (E) LDVFARPAS(0.0)PS(0.99)LQLLPWR s:Phosphorylated S PPP1R13L 89431.8 1 12 371.1 339.39 HUMAN 1 0.1435 10.3664 FARTVARSPVAPARG-p O15525;S124-p FARTVARSPVAPARG 0.407362201994798 0.0194441685239441 -0.132666666666667 -0.526666666666667 7.20120158008154 23.5008592687151 -0.132666666666667 -0.526666666666667 0.190493359937481 0.00446595222787662 -1.49618856409015 -4.66846179556183 O15525 MAFG O15525.S124.p_MAFG O15525_S124s _1_1_124_124 O15525 O15525 Transcription factor MafG HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4916.4916.3 14.61 11.42 4.944 2 1 1 0 478.5993 1353.8164 S124s TMT10 120 (R) TVARsPVAPAR (G) T(0.0)VARS(0.99)PVAPAR s:Phosphorylated S MAFG 17906.3 1 1 6020.1 14.61 HUMAN 1 -7.2012 -23.5009 FASYLTFSPSEVKSL-p P54886;S657-p FASYLTFSPSEVKSL 0.754868620755395 0.0138319957403419 0.046 0.485666666666667 2.33438377153582 25.8136246958476 0.046 0.485666666666667 0.584200094442911 0.00262202923955459 0.581643269971014 5.24601145055602 P54886 ALDH18A1 P54886.S657.p_ALDH18A1 P54886_S657s _1_1_657_657 P54886 P54886|P54886-2 Delta-1-pyrroline-5-carboxylate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30288.30288.3 17.64 17.64 1.324 5 1 1 0 672.0157 1934.0675 S657s TMT10 650 (K) FASYLTFsPSEVK (S) FAS(0.0)Y(0.0)LT(0.0)FS(0.99)PS(0.0)EVK K:TMT10,s:Phosphorylated S ALDH18A1 88042.4 1 6 2259.1 91 HUMAN 1 2.3344 25.8136 FATIKSASLVTRQIH-p Q9H2K8;S442-p FATIKSASLVTRQIH 0.953559929465783 0.636361829535073 0.00966666666666666 -0.051 0.406024658012695 2.67209849974384 0.00966666666666667 -0.051 0.91074654881109 0.540493094967801 0.117441129736641 -0.652900837068764 Q9H2K8 TAOK3 Q9H2K8.S442.p_TAOK3 Q9H2K8_S442s _1_1_442_442 Q9H2K8 Q9H2K8 Serine/threonine-protein kinase TAO3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8139.8139.2 9.74 3.37 2.12 3 1 1 0 521.7788 962.5832 S442s TMT10 440 (K) SAsLVTR (Q) S(0.0)AS(0.99)LVT(0.0)R s:Phosphorylated S TAOK3 105860.4 1 13 1125.2 174.76 HUMAN 1 0.406 -2.6721 FAVKRRFSDFLGLYE-p Q13596-3;S188-p FAVKRRFSDFLGLYE 0.344220109355696 0.0409239648103401 -0.133 0.580333333333333 8.60097634990525 18.6032659589639 -0.133 0.580333333333333 0.138007397132976 0.0137934658537161 -1.73928975645804 3.58234294509214 Q13596 SNX1 Q13596.3.S188.p_SNX1 Q13596-3_S188s _1_1_188_188 Q13596-3 Q13596-3|Q13596-2 Isoform 3 of Sorting nexin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27613.27613.3 16.47 14.03 8.74 2 1 1 0 638.3384 1833.0311 S188s TMT10 186 (R) RFsDFLGLYEK (L) RFS(0.99)DFLGLY(0.0)EK K:TMT10,s:Phosphorylated S SNX1 63252.3 10 8 1560.1 131.56 HUMAN 1 -8.601 18.6033 FCGPRSFTPLSILKR-p Q96S65;T68-p FCGPRSFTPLSILKR 0.787377117062761 0.00234769441382231 -0.0393333333333333 0.713333333333333 2.00469781266876 40.4207841683782 -0.0393333333333334 0.713333333333333 0.630275199772651 9.07656627592045e-05 -0.509842153364745 10.3222568843579 Q96S65 CSRNP1 Q96S65.T68.p_CSRNP1 Q96S65_T68t _1_1_68_68 Q96S65 Q96S65 Cysteine/serine-rich nuclear protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30679.30679.2 9.95 8.29 1.675 3 1 1 0 772.4494 1463.9238 T68t TMT10 66 (R) SFtPLSILK (R) S(0.0)FT(0.99)PLS(0.0)ILK K:TMT10,t:Phosphorylated T CSRNP1 64876.5 2 1 6729.1 9.95 HUMAN 1 -2.0047 40.4208 FCGVCSDTDEDNGNG-p P49792;T2743-p FCGVCSDTDEDNGNG 0.490214660431765 0.592020135778882 0.0943333333333333 0.057 5.70671641507115 3.08067481150745 0.0943333333333333 0.057 0.268737553081344 0.491963087980623 1.23213618748095 0.736646165935822 P49792 RANBP2 P49792.T2743.p_RANBP2 P49792_S2741sT2743t_2_2_2741_2743 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28954.29573.5 23.81 23.81 3.723 5 2 2 0 1022.884 4950.4583 S2741s T2743t TMT10 2724 (K) AKADTLKLPPTFFCGVCsDtDEDNGNGEDFQSELQK (V) AKADT(0.0)LKLPPT(0.0)FFCGVCS(0.99)DT(0.99)DEDNGNGEDFQS(0.0)ELQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T RANBP2 362585.9 17 83 9.1 1298.62 HUMAN 1 5.7067 3.0807 FCKVYTLTPFLANNR-p P49407;T275-p FCKVYTLTPFLANNR 0.398837050455077 0.0398548575294297 -0.146666666666667 0.253333333333333 7.36671445919356 18.7680634444745 -0.146666666666667 0.253333333333333 0.183370113618432 0.0132798648603866 -1.52506416594497 3.6162880565554 P49407 ARRB1 P49407.T275.p_ARRB1 P49407_T275t _1_1_275_275 P49407 P49407|P49407-2 Beta-arrestin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26933.26933.3 14.27 14.27 3.524 3 1 1 0 573.3025 1637.9213 T275t TMT10 271 (K) VYTLtPFLANNR (E) VY(0.0)T(0.0)LT(0.99)PFLANNR t:Phosphorylated T ARRB1 47464.2 1 1 1962.1 105.05 HUMAN 1 -7.3667 18.7681 FCPGERNSYEPIKEF-p Q5VT06;S1024-p FCPGERNSYEPIKEF 0.867004984935891 0.00298089814036961 -0.0263333333333333 -0.66 1.20780145177054 38.003442082746 -0.0263333333333333 -0.66 0.7572161268906 0.000158363755315491 -0.32522059819742 -9.26860549094755 Q5VT06 CEP350 Q5VT06.S1024.p_CEP350 Q5VT06_S1024s _1_1_1024_1024 Q5VT06 Q5VT06 Centrosome-associated protein 350 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14721.14721.3 16.55 16.55 6.896 2 1 1 0 755.3627 2184.116 S1024s TMT10 1016 (K) EFCPGERNsYEPIK (E) EFCPGERNS(0.99)Y(0.0)EPIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CEP350 352521.4 1 7 265.1 395.34 HUMAN 1 -1.2078 -38.0034 FCPQLDDSTVARELA-p Q86VR2;S274-p FCPQLDDSTVARELA 0.982842045127411 0.240224505188877 0.00433333333333332 0.193333333333333 0.149018371909806 8.161327280864 0.00433333333333333 0.193333333333333 0.966269258430159 0.152709927832438 0.0442800970462723 1.66259732288921 Q86VR2 FAM134C Q86VR2.S274.p_FAM134C Q86VR2_S258sS260sS274s_3_3_258_274 Q86VR2 Q86VR2|K7EQI9|Q86VR2-2 Reticulophagy regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25213.25213.3 11.15 11.15 1.243 4 3 3 0 1131.7754 3137.3989 M254m S258s S260s S274s TMT10 253 (R) AmDNHsDsEEELAAFCPQLDDsTVAR (E) AM(1.0)DNHS(0.99)DS(0.99)EEELAAFCPQLDDS(0.99)T(0.0)VAR C:Carbamidomethylation,m:Oxidized methionine,s:Phosphorylated S RETREG3 51794.7 1 12 1136.1 173.56 HUMAN 1 0.149 8.1613 FCPRGLCSPEKHLGE-p Q9UHF7-2;S586-p FCPRGLCSPEKHLGE 0.391427602224422 0.00354006757293965 -0.140666666666667 -1.05433333333333 7.51070709819818 36.5853787706951 -0.140666666666667 -1.05433333333333 0.177390063907547 0.00021951394913147 -1.55014632974665 -8.69657988571561 Q9UHF7 TRPS1 Q9UHF7.2.S586.p_TRPS1 Q9UHF7-2_S586s _1_1_586_586 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9733.9733.2 7.41 7.41 99 1 1 1 0 664.8375 1248.7022 S586s TMT10 583 (R) GLCsPEK (H) GLCS(1.0)PEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TRPS1 145246 1 19 14.1 1150.14 HUMAN 1 -7.5107 -36.5854 FCRDKMNSPGLQTKE-p O14578-4;S1474-p FCRDKMNSPGLQTKE 0.130590669739805 0.119464099601837 -0.528 -0.229 18.285597678259 12.1667592613941 -0.528 -0.229 0.0148402163420403 0.0607189249838622 -3.52029706917159 -2.36075116937629 O14578 CIT O14578.4.S1474.p_CIT O14578-4_S1474s _1_1_1474_1474 O14578-4 O14578-4|O14578-3 Isoform 4 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12296.12296.2 9.16 9.16 2.556 2 1 1 0 757.3965 1433.8187 S1474s TMT10 1472 (K) MNsPGLQTK (E) MNS(0.99)PGLQT(0.0)K K:TMT10,s:Phosphorylated S CIT 238656.7 3 14 366.1 342.11 HUMAN 1 -18.2856 -12.1668 FCRGCWESFLNLKIQ-p Q9P2G1;S362-p FCRGCWESFLNLKIQ 0.870862434212305 0.269508476742249 0.028 0.128 1.17612958732954 7.49832702862825 0.028 0.128 0.762758474095788 0.177896456348945 0.317493293910601 1.54753265184832 Q9P2G1 ANKIB1 Q9P2G1.S362.p_ANKIB1 Q9P2G1_S362s _1_1_362_362 Q9P2G1 Q9P2G1 Ankyrin repeat and IBR domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31154.31154.2 10.06 10.06 99 1 1 1 0 896.4381 1711.9242 S362s TMT10 358 (R) GCWEsFLNLK (I) GCWES(1.0)FLNLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANKIB1 124110.4 2 5 1291.1 157.55 HUMAN 1 1.1761 7.4983 FCSDKPKSGAKYGLP-p Q96A33;S289-p FCSDKPKSGAKYGLP 0.611198343282078 0.035438870739653 0.0673333333333333 -0.326333333333333 3.96198113418331 19.5248254638951 0.0673333333333333 -0.326333333333333 0.401607566526601 0.0111562298557876 0.909855273965848 -3.77428160622112 Q96A33 CCDC47 Q96A33.S289.p_CCDC47 Q96A33_S289s _1_1_289_289 Q96A33 Q96A33|Q96A33-2 Coiled-coil domain-containing protein 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16875.16875.4 10.88 10.88 1.111 3 1 1 0 764.1414 2973.5831 S289s TMT10 275 (K) EMQDLSEFCSDKPKsGAK (Y) EMQDLS(0.0)EFCS(0.0)DKPKS(0.99)GAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCDC47 56158.2 1 1 6570.1 10.88 HUMAN 1 3.962 -19.5248 FCSHRSNTPESIAET-p Q9Y4H2;T520-p FCSHRSNTPESIAET 0.118727214055873 0.00951798723429863 0.358 0.733333333333333 19.2424883941922 28.519622263813 0.358 0.733333333333334 0.0119055965290835 0.00140616982320363 3.7182331012739 5.9851818161036 Q9Y4H2 IRS2 Q9Y4H2.T520.p_IRS2 Q9Y4H2_T520t _1_1_520_520 Q9Y4H2 Q9Y4H2 Insulin receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10603.10603.3 15.79 15.79 1.294 4 1 1 0 593.6241 1698.886 T520t TMT10 518 (R) SNtPESIAETPPAR (D) S(0.0)NT(0.99)PES(0.0)IAET(0.0)PPAR t:Phosphorylated T IRS2 138529.8 2 3 1344.1 151.43 HUMAN 1 19.2425 28.5196 FCVEEEDSESSLQKR-p Q14684;S392-p FCVEEEDSESSLQKR 0.527192383862172 0.156579697012803 0.0883333333333333 -0.145 5.1455801400975 10.5896027560613 0.0883333333333333 -0.145 0.30580317206386 0.0873051221681107 1.13067072237575 -2.08345802332322 Q14684 RRP1B Q14684.S392.p_RRP1B Q14684_S392s _1_1_392_392 Q14684 Q14684|Q14684-2 Ribosomal RNA processing protein 1 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20992.20992.2 16.7 16.7 2.426 3 1 1 0 1162.5431 2244.1106 S392s TMT10 384 (R) VFCVEEEDsESSLQK (R) VFCVEEEDS(0.99)ES(0.0)S(0.0)LQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RRP1B 84825.4 5 3 473.1 301.95 HUMAN 1 5.1456 -10.5896 FCVPPGASPEVPKPA-p Q2NKJ3;S753-p FCVPPGASPEVPKPA 0.12656840713573 0.491429125402371 0.273 0.0686666666666667 18.6491141226851 4.12284815922338 0.273 0.0686666666666667 0.0136486151372589 0.387003759623333 3.59484566173303 0.940377596408532 Q2NKJ3 CTC1 Q2NKJ3.S753.p_CTC1 Q2NKJ3_S753s _1_1_753_753 Q2NKJ3 Q2NKJ3|Q2NKJ3-2 CST complex subunit CTC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36672.36672.4 24.32 24.32 3.549 5 1 1 0 968.2508 3790.0191 S753s TMT10 745 (R) NFCVPPGAsPEVPKPALSFYVLGSWLGGTQR (K) NFCVPPGAS(0.99)PEVPKPALS(0.0)FY(0.0)VLGS(0.0)WLGGT(0.0)QR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CTC1 137059.4 4 3 3396.1 52.09 HUMAN 1 18.6491 4.1228 FDALMLKSPTVKGLM-p Q6ISB3;S557-p FDALMLKSPTVKGLM 0.0921445609591448 0.0220632358795118 -0.348666666666667 0.326666666666667 22.062693603501 22.6300117089904 -0.348666666666667 0.326666666666667 0.00621914438564135 0.00545756389678391 -4.33628046402844 4.46260885594862 Q6ISB3 GRHL2 Q6ISB3.S557.p_GRHL2 Q6ISB3_S557s _1_1_557_557 Q6ISB3 Q6ISB3|Q6ISB3-2 Grainyhead-like protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29694.29694.3 12.02 8.35 10.117 3 1 1 0 892.8127 2596.4511 S557s TMT10 545 (K) ETDDVFDALMLKsPTVK (G) ET(0.0)DDVFDALMLKS(0.99)PT(0.0)VK K:TMT10,s:Phosphorylated S GRHL2 71446.2 2 12 651.1 254.16 HUMAN 1 -22.0627 22.63 FDAREAHSDENPSEG-p Q9NZN5;S1389-p FDAREAHSDENPSEG 0.533719893220892 0.546812611298521 -0.0943333333333333 0.086 5.0490471592663 3.52550874490338 -0.0943333333333334 0.086 0.312676530320278 0.44406763897288 -1.11303871797952 0.825141254517343 Q9NZN5 ARHGEF12 Q9NZN5.S1389.p_ARHGEF12 Q9NZN5_S1389s _1_1_1389_1389 Q9NZN5 Q9NZN5|Q9NZN5-2|E9PMR6 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5905.5905.3 20.34 20.34 7.637 2 1 1 0 894.0768 2600.2476 S1389s Hydrogen 1386 (R) EAHsDENPSEGDGAVNKEEK (D) EAHS(0.99)DENPS(0.0)EGDGAVNKEEK K:TMT10-Lys-Only,s:Phosphorylated S ARHGEF12 174199.1 4 14 251.1 406.16 HUMAN 1 -5.049 3.5255 FDASHCDSDKGEFGG-p Q16576;S99-p FDASHCDSDKGEFGG 0.421053324853859 0.265044526652652 0.121666666666667 -0.157 6.92046400339032 7.59447489316982 0.121666666666667 -0.157 0.203213988403086 0.174001307085005 1.44708355004415 -1.56425332189335 Q16576 RBBP7 Q16576.S99.p_RBBP7 Q16576_S95sS99s_2_2_95_99 Q16576 Q16576-2 Histone-binding protein RBBP7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25754.25754.5 11.95 11.95 11.952 4 2 2 0 1029.4873 4983.4699 S95s S99s TMT10 83 (R) VHIPNDDAQFDAsHCDsDKGEFGGFGSVTGKIECEIK (I) VHIPNDDAQFDAS(0.99)HCDS(0.99)DKGEFGGFGS(0.0)VT(0.0)GKIECEIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RBBP7 48161.5 1 8 1734.1 118.69 HUMAN 1 6.9205 -7.5945 FDDAVVQSDMKHWPF-p P11142;S85-p FDDAVVQSDMKHWPF 0.241110034837602 0.136320585772495 -0.194 0.211333333333333 11.8074492978042 11.4035761638262 -0.194 0.211333333333333 0.065956115555193 0.0723839674506333 -2.2982273346549 2.22592339256511 P11142 HSPA8 P11142.S85.p_HSPA8 P11142_S85s _1_1_85_85 P11142 P11142|E9PKE3|E9PNE6|P11142-2 Heat shock cognate 71 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14235.14235.3 15.5 15.5 99 1 1 1 0 650.3271 1868.9941 S85s TMT10 77 (R) RFDDAVVQsDMK (H) RFDDAVVQS(1.0)DMK K:TMT10,s:Phosphorylated S HSPA8 71125 1 10 367.1 341.38 HUMAN 1 -11.8074 11.4036 FDDEDEESDLFTEAP-p Q641Q2;S375-p FDDEDEESDLFTEAP 0.719529968451986 0.340272984019385 0.0513333333333333 0.103333333333333 2.69863269039515 6.20148672334902 0.0513333333333333 0.103333333333333 0.537200899217697 0.239801186540608 0.658507090468869 1.32005448571647 Q641Q2 FAM21A Q641Q2.S375.p_FAM21A Q641Q2_S375s _1_1_375_375 Q641Q2 Q641Q2|Q641Q2-2|E7ESD2|F8W7U3 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26574.26574.2 17.2 17.2 3.988 2 1 1 0 1319.0625 2557.1416 S375s TMT10 366 (K) GLFDDEDEEsDLFTEAPQDR (Q) GLFDDEDEES(0.99)DLFT(0.0)EAPQDR s:Phosphorylated S WASHC2A 147352.2 1 27 12.1 1178.3 HUMAN 1 2.6986 6.2015 FDEESNASMSTARDE-p Q9P2D1;S2275-p FDEESNASMSTARDE 0.18805512807753 0.664194719622482 0.265666666666667 -0.0843333333333334 14.2390844316222 2.43309961616417 0.265666666666667 -0.0843333333333334 0.0376783223074779 0.571070910458216 2.73692136799857 -0.602637852690473 Q9P2D1 CHD7 Q9P2D1.S2275.p_CHD7 Q9P2D1_S2272sS2275s_2_2_2272_2275 Q9P2D1 Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9705.9705.3 7.34 7.34 2.693 5 2 2 0 816.9911 2289.0251 S2272s S2275s TMT10 2267 (K) NFDEEsNAsMSTARDETR (D) NFDEES(0.99)NAS(0.99)MS(0.0)T(0.0)ARDET(0.0)R s:Phosphorylated S CHD7 337747 2 19 256.1 399.25 HUMAN 1 14.2391 -2.4331 FDFEGSLSPVIAPKK-p Q9H1A4;S688-p FDFEGSLSPVIAPKK 0.636854133601066 0.0822101506802639 -0.086 -0.204 3.6543714182281 14.3778608062099 -0.086 -0.204 0.431084947130898 0.0364933657148142 -0.850457584096902 -2.76085164201373 Q9H1A4 ANAPC1 Q9H1A4.S688.p_ANAPC1 Q9H1A4_S688s _1_1_688_688 Q9H1A4 Q9H1A4 Anaphase-promoting complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29058.29058.2 19.32 14.78 2.15 2 1 1 0 1080.0645 2079.1527 S688s TMT10 680 (R) NFDFEGSLsPVIAPK (K) NFDFEGS(0.0)LS(0.99)PVIAPK K:TMT10,s:Phosphorylated S ANAPC1 218664.2 9 11 460.1 305.66 HUMAN 1 -3.6544 -14.3779 FDFLKNLSLEELQMR-p Q13188-2;S472-p FDFLKNLSLEELQMR 0.329350427440409 0.0382904826671863 0.164 0.267666666666667 9.01701396517532 19.034950098061 0.164 0.267666666666667 0.125400308086877 0.0124883479405193 1.81130816859905 3.67160669715857 Q13188 STK3 Q13188.2.S472.p_STK3 Q13188-2_S472s _1_1_472_472 Q13188-2 Q13188-2|A0A087WZ06 Isoform 2 of Serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22010.22010.2 12.87 4.57 99 1 1 1 0 771.386 1461.7933 S472s TMT10 470 (K) NLsLEELQMR (L) NLS(1.0)LEELQMR s:Phosphorylated S STK3 59803 1 10 1088.1 179.29 HUMAN 1 9.017 19.035 FDFPKTPSSQNLLAL-p O75385;S638-p FDFPKTPSSQNLLAL 0.250291423323306 0.224946556083533 -0.176 -0.198666666666667 11.4835168607161 8.53405538520615 -0.176 -0.198666666666667 0.0710637815248458 0.140150438683531 -2.24104526950075 -1.72711689293242 O75385 ULK1 O75385.S638.p_ULK1 O75385_S638s _1_1_638_638 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31207.31207.2 7.05 3.93 1.155 3 1 1 0 846.9672 1612.9584 S638s TMT10 636 (K) TPsSQNLLALLAR (Q) T(0.0)PS(0.99)S(0.0)QNLLALLAR s:Phosphorylated S ULK1 113656.3 7 15 351.1 351.01 HUMAN 1 -11.4835 -8.5341 FDIEEDYTTDEDMVE-p Q9UPP1;T705-p FDIEEDYTTDEDMVE 0.714354134547226 0.0494231953083551 0.0526666666666667 0.332333333333333 2.75456189176933 17.4703610198235 0.0526666666666667 0.332333333333333 0.530327088345458 0.0179045701094191 0.670104402616547 3.35321443136981 Q9UPP1 PHF8 Q9UPP1.T705.p_PHF8 Q9UPP1_T705tT706t_2_2_705_706 Q9UPP1 Q9UPP1|Q9UPP1-2|Q9UPP1-3|Q9UPP1-4 Histone lysine demethylase PHF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23425.23425.5 19.97 19.97 2.528 4 2 2 0 1018.6666 4929.365 T705t T706t TMT10 681 (R) AKPCSDPNRVREPGEVEFDIEEDYttDEDMVEGVEGK (L) AKPCS(0.0)DPNRVREPGEVEFDIEEDY(0.0)T(0.99)T(0.99)DEDMVEGVEGK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T PHF8 118946 5 30 376.1 336.84 HUMAN 1 2.7546 17.4704 FDIHPVGSLAEKIQA-p Q9NWX5;S353-p FDIHPVGSLAEKIQA 0.0515638782216539 0.129052125277106 -0.470333333333333 -0.259 28.1701925886216 11.7212345893487 -0.470333333333333 -0.259 0.00152398517091897 0.0672785373234968 -5.8941500086649 -2.28187719037598 Q9NWX5 ASB6 Q9NWX5.S353.p_ASB6 Q9NWX5_S353s _1_1_353_353 Q9NWX5 Q9NWX5|F6TX30 Ankyrin repeat and SOCS box protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28732.28732.3 10.16 10.16 99 1 1 1 0 849.1213 2465.3804 S353s TMT10 340 (K) LQLPENFDIHPVGsLAEK (I) LQLPENFDIHPVGS(1.0)LAEK K:TMT10,s:Phosphorylated S ASB6 47705.6 1 1 6046.1 14.45 HUMAN 1 -28.1702 -11.7212 FDKDGNGYISAAELR-p E7EMB3;Y147-p FDKDGNGYISAAELR 0.555181493717949 0.45587020311997 -0.188333333333333 -0.078 4.71980732792774 4.5486363762722 -0.188333333333333 -0.078 0.337302272534526 0.350862022410451 -1.05245179577405 -1.02046234066972 E7EMB3 NotFound E7EMB3.Y147.p_NotFound E7EMB3_Y147y _1_1_147_147 E7EMB3 E7EMB3|E7ETZ0|P0DP24|Q96HY3 Calmodulin-2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.15161.15246.2 25.23 14.76 5.37 2 1 1 0 787.8746 1494.775 Y147y TMT10 143 (K) DGNGyISAAELR (H) DGNGY(0.99)IS(0.0)AAELR y:Phosphorylated Y CALM2 21860.1 5 1 54.1 41.87 HUMAN 1 -4.7198 -4.5486 FDKGNIWSAEKGGNS-p Q9NQW6;S449-p FDKGNIWSAEKGGNS 0.544047599257806 0.00894162368750262 -0.089 -0.792333333333333 4.88141105971812 29.0272159988603 -0.089 -0.792333333333333 0.324981690914072 0.00125106075314761 -1.08228058733393 -6.13221842018173 Q9NQW6 ANLN Q9NQW6.S449.p_ANLN Q9NQW6_S449s _1_1_449_449 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18399.18399.2 10.88 5.4 99 1 1 1 0 721.8763 1362.7782 S449s TMT10 445 (K) GNIWsAEK (G) GNIWS(1.0)AEK K:TMT10,s:Phosphorylated S ANLN 125566 2 30 68.1 675.08 HUMAN 1 -4.8814 -29.0272 FDKYHPGYFGKVGMK-p P46776;Y52-p FDKYHPGYFGKVGMK 0.801198157109226 0.28961081224706 -0.0443333333333333 -0.118666666666667 1.85326017308147 7.10049787515272 -0.0443333333333334 -0.118666666666667 0.65264044289157 0.194962108240394 -0.476054522011333 -1.47817934090888 P46776 RPL27A P46776.Y52.p_RPL27A P46776_Y52y _1_1_52_52 P46776 P46776 60S ribosomal protein L27a GG20160819_MSz_CCLE_T4D7_pY_Injection_01.13780.13780.3 16.23 10.97 16.226 2 1 1 0 502.9237 1426.7883 Y52y TMT10 48 (K) YHPGyFGK (V) Y(0.0)HPGY(0.99)FGK K:TMT10,y:Phosphorylated Y RPL27A 16675.2 1 2 220.1 16.23 HUMAN 1 -1.8533 -7.1005 FDLSKRLSENEIICN-p Q13137-4;S339-p FDLSKRLSENEIICN 0.34689437832203 0.121737440575108 -0.143 -0.261333333333333 8.54235521306309 12.0618390152607 -0.143 -0.261333333333333 0.139882852115282 0.0622036828574295 -1.72914040489362 -2.34213218796337 Q13137 CALCOCO2 Q13137.4.S339.p_CALCOCO2 Q13137-4_S339s _1_1_339_339 Q13137-4 Q13137-4|Q13137-3|Q13137-2|Q13137-5 Isoform 4 of Calcium-binding and coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19411.19411.3 13.57 13.57 99 1 1 1 0 675.6771 1945.0487 S339s TMT10 337 (K) RLsENEIICNALQR (Q) RLS(1.0)ENEIICNALQR C:Carbamidomethylation,s:Phosphorylated S CALCOCO2 55986 2 2 1533.1 133.47 HUMAN 1 -8.5424 -12.0618 FDNIDNLSPKASHRS-p P25054;S780-p FDNIDNLSPKASHRS 0.669291859165117 0.293008389573659 -0.0766666666666667 -0.131 3.26337885238732 7.03831568126348 -0.0766666666666667 -0.131 0.471695914558905 0.197773651441807 -0.773418149460026 -1.46731090604895 P25054 APC P25054.S780.p_APC P25054_S780s _1_1_780_780 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28765.28765.5 21.88 21.88 3.415 3 1 1 0 642.5225 3128.6152 S780s TMT10 759 (K) ALEAELDAQHLSETFDNIDNLsPK (A) ALEAELDAQHLS(0.0)ET(0.0)FDNIDNLS(0.99)PK K:TMT10,s:Phosphorylated S APC 313808.5 3 7 33.1 890.71 HUMAN 1 -3.2634 -7.0383 FDNKDDDSDTETSND-p Q9UID6;S60-p FDNKDDDSDTETSND 0.336172963233061 0.533101188866895 -0.147666666666667 0.0786666666666667 8.82897677655083 3.67334862933881 -0.147666666666667 0.0786666666666667 0.13094904103319 0.429205360182236 -1.77875841446437 0.854014966795146 Q9UID6 ZNF639 Q9UID6.S60.p_ZNF639 Q9UID6_S60s _1_1_60_60 Q9UID6 Q9UID6 Zinc finger protein 639 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16913.16913.3 18.94 16.12 1.112 5 1 1 0 996.1296 2906.4147 S60s TMT10 52 (K) YFDNKDDDsDTETSNDLPK (F) Y(0.0)FDNKDDDS(0.99)DT(0.0)ET(0.0)S(0.0)NDLPK K:TMT10,s:Phosphorylated S ZNF639 57593.9 5 1 2698.1 73.61 HUMAN 1 -8.829 3.6733 FDNLDVVSEDEEAPE-p P55201-2;S120-p FDNLDVVSEDEEAPE 0.412507711448368 0.0340853782254752 -0.132 0.278333333333333 7.09330085544084 19.7741263505288 -0.132 0.278333333333333 0.195285462431262 0.0105338557036239 -1.47733535565985 3.82711259290165 P55201 BRPF1 P55201.2.S120.p_BRPF1 P55201-2_S120s _1_1_120_120 P55201-2 P55201-2|P55201-3|P55201-4 Isoform 2 of Peregrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30227.30227.3 24.55 22.78 9.284 3 1 1 0 1162.5455 3405.6586 S120s TMT10 110 (R) ISIFDNLDVVsEDEEAPEEAPENGSNK (E) IS(0.0)IFDNLDVVS(0.99)EDEEAPEEAPENGS(0.0)NK K:TMT10,s:Phosphorylated S BRPF1 139837.6 13 3 723.1 237.03 HUMAN 1 -7.0933 19.7741 FDNPEENSSEFPVTF-p Q8IWI9-4;S2127-p FDNPEENSSEFPVTF 0.0459711305665682 0.624237557694093 0.674 0.124666666666667 29.7089292296547 2.78339267447655 0.674 0.124666666666667 0.00106931849145771 0.526818154416685 6.34405116152784 0.675971706256547 Q8IWI9 MGA Q8IWI9.4.S2127.p_MGA Q8IWI9-4_S2127s _1_1_2127_2127 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.24437.24437.4 7.3 2.87 1.323 6 1 1 0 1041.2712 4082.1052 S2127s TMT10 2119 (K) GFDNPEENsSEFPVTFKEESKFELSGSK (V) GFDNPEENS(0.99)S(0.0)EFPVT(0.0)FKEES(0.0)KFELS(0.0)GS(0.0)K K:TMT10,s:Phosphorylated S MGA 338321.5 1 17 141.1 523.06 HUMAN 1 29.7089 2.7834 FDNRSYDSLHRPKST-p Q8N8S7;S531-p FDNRSYDSLHRPKST 0.53850328576255 0.0233346665139398 -0.108 -0.501333333333333 4.96946358948567 22.2712279064884 -0.108 -0.501333333333333 0.31845908360758 0.00592757706991173 -1.0984591513205 -4.37952431344313 Q8N8S7 ENAH Q8N8S7.S531.p_ENAH Q8N8S7_S531s _1_1_531_531 Q8N8S7 Q8N8S7 Protein enabled homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6065.6065.4 12.67 12.67 4.627 3 1 1 0 410.9699 1560.8898 S531s TMT10 528 (R) SYDsLHRPK (S) S(0.0)Y(0.0)DS(0.99)LHRPK K:TMT10,s:Phosphorylated S ENAH 66623.2 3 17 794.1 224.28 HUMAN 1 -4.9695 -22.2712 FDPFADASKGDDLLP-p K7EM18;S17-p FDPFADASKGDDLLP 0.685362519428199 0.362433659617426 0.0766666666666666 0.136 3.0779547466896 5.84718073716616 0.0766666666666667 0.136 0.492271309864867 0.260184802879878 0.736201794139168 1.25699993050469 K7EM18 NotFound K7EM18.S17.p_NotFound K7EM18_S17s _1_1_17_17 K7EM18 K7EM18 Eukaryotic translation initiation factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31666.31666.4 13.93 13.93 2.649 5 1 1 0 991.9795 3884.9293 S17s Acetyl 2 (M) SAIQNLHSFDPFADAsKGDDLLPAGTEDYIHIR (I) S(0.0)AIQNLHS(0.0)FDPFADAS(0.99)KGDDLLPAGT(0.0)EDY(0.0)IHIR K:TMT10,s:Phosphorylated S EIF1 13778.5 1 2 4888.1 25.41 HUMAN 1 3.078 5.8472 FDPLAPVTPGGAGVG-p Q96DN6;T83-p FDPLAPVTPGGAGVG 0.957754275771531 0.612238582904788 -0.00966666666666668 -0.0493333333333333 0.365559644614748 2.89475297424325 -0.00966666666666669 -0.0493333333333333 0.919272007082449 0.513481383381755 -0.106170521547113 -0.698857023652471 Q96DN6 MBD6 Q96DN6.T83.p_MBD6 Q96DN6_T83t _1_1_83_83 Q96DN6 Q96DN6 Methyl-CpG-binding domain protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34689.34689.4 18.6 12.29 2.758 3 1 1 0 811.1542 3161.6229 T83t TMT10 73 (K) VFNFDPLAPVtPGGAGVGPASEEDMTK (L) VFNFDPLAPVT(0.99)PGGAGVGPAS(0.0)EEDMT(0.0)K K:TMT10,t:Phosphorylated T MBD6 101883.9 2 1 2682.1 74.08 HUMAN 1 -0.3656 -2.8948 FDQLALDSPKGCGTV-p Q07020;S130-p FDQLALDSPKGCGTV 0.555240727945259 0.0182600433706264 0.116333333333333 -0.335 4.71836776119132 23.9299584589225 0.116333333333333 -0.335 0.337414097491368 0.00404579761559843 1.05218526031904 -4.77214724738139 Q07020 RPL18 Q07020.S130.p_RPL18 Q07020_S130s _1_1_130_130 Q07020 Q07020|G3V203|Q07020-2 60S ribosomal protein L18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31366.31366.3 17.29 17.29 12.623 2 1 1 0 667.0351 1919.1254 S130s TMT10 120 (K) ILTFDQLALDsPK (G) ILT(0.0)FDQLALDS(0.99)PK K:TMT10,s:Phosphorylated S RPL18 21748.2 4 1 3881.1 41.42 HUMAN 1 4.7184 -23.93 FDQRDPGTPNDDSDI-p O00512;T115-p FDQRDPGTPNDDSDI 0.0946777628850844 0.847140377076707 0.429 0.025 21.7825209899854 1.01215900288957 0.429 0.025 0.0066335789302988 0.7921074531674 4.27237380401988 0.276898292516688 O00512 BCL9 O00512.T115.p_BCL9 O00512_T115t _1_1_115_115 O00512 O00512 B-cell CLL/lymphoma 9 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14045.14045.5 16.82 12.23 1.604 6 1 1 0 841.198 4121.9925 T115t TMT10 102 (R) SISADSFDQRDPGtPNDDSDIKECNSADHIK (S) S(0.0)IS(0.0)ADS(0.0)FDQRDPGT(0.99)PNDDS(0.0)DIKECNS(0.0)ADHIK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T BCL9 149515.8 2 5 313.1 369.9 HUMAN 1 21.7825 1.0122 FDRCTGHSAEHTQCG-p Q96RL1;S224-p FDRCTGHSAEHTQCG 0.699674004566978 0.876038194478254 0.0696666666666667 0.0176666666666667 2.91356835022391 0.808877732453734 0.0696666666666667 0.0176666666666667 0.511261588410463 0.830065238332053 0.702801709726719 0.225203872396769 Q96RL1 UIMC1 Q96RL1.S224.p_UIMC1 Q96RL1_S224s _1_1_224_224 Q96RL1 Q96RL1|Q96RL1-3 BRCA1-A complex subunit RAP80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3584.3584.4 16.1 16.1 1.653 5 1 1 0 692.3184 2686.2826 S224s TMT10 220 (R) CTGHsAEHTQCGKPQESTGR (G) CT(0.0)GHS(0.99)AEHT(0.0)QCGKPQES(0.0)T(0.0)GR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UIMC1 80924.2 1 6 339.1 354.34 HUMAN 1 2.9136 0.8089 FDREDQASPRAGSLA-p A0A087X1R1;S814-p FDREDQASPRAGSLA 0.618351639687857 0.0151114165651301 -0.0696666666666667 -0.484 3.87775044851061 25.1874404155203 -0.0696666666666667 -0.484 0.409472702812607 0.00302869791408992 -0.893688194207751 -5.08499802552594 A0A087X1R1 SMTN A0A087X1R1.S814.p_SMTN A0A087X1R1_S814s _1_1_814_814 A0A087X1R1 A0A087X1R1|A0A087WVP4 Smoothelin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12907.12907.4 12.27 8.17 12.267 2 1 1 0 569.5386 2195.1643 S814s TMT10 802 (K) KMGSIFDREDQAsPR (A) KMGS(0.0)IFDREDQAS(0.99)PR K:TMT10,s:Phosphorylated S SMTN 108527.2 2 12 826.1 217.61 HUMAN 1 -3.8778 -25.1874 FDRPLPVSRLVSLIG-p P25786-2;S112-p FDRPLPVSRLVSLIG 0.561478707762634 0.0660071503440806 -0.0946666666666667 0.217 4.61371009241432 15.7022895908326 -0.0946666666666667 0.217 0.34564397481027 0.0269011620674843 -1.03276760989398 3.00915581772049 P25786 PSMA1 P25786.2.S112.p_PSMA1 P25786-2_S112s _1_1_112_112 P25786-2 P25786-2 Isoform Long of Proteasome subunit alpha type-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21329.21329.3 8.63 8.63 99 1 1 1 0 547.9612 1561.9052 S112s TMT10 103 (R) FVFDRPLPVsR (L) FVFDRPLPVS(1.0)R s:Phosphorylated S PSMA1 30524.2 1 1 3397.1 52.07 HUMAN 1 -4.6137 15.7023 FDRWLDESDAEMELR-p H3BS72;S152-p FDRWLDESDAEMELR 0.987422290515613 0.986634938703816 -0.00266666666666666 -0.00199999999999998 0.111723036783945 0.0879957049864422 -0.00266666666666667 -0.00199999999999999 0.974602893268573 0.979942130222035 -0.0333345113848724 -0.0263220171295411 H3BS72 NotFound H3BS72.S152.p_NotFound H3BS72_S152s _1_1_152_152 H3BS72 H3BS72|Q9P035|H3BPZ1 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32235.32854.4 27.61 27.61 99 1 1 1 0 783.3777 3050.5243 S152s TMT10 137 (K) RPLFLAPDFDRWLDEsDAEMELR (A) RPLFLAPDFDRWLDES(1.0)DAEMELR s:Phosphorylated S HACD3 47402.6 53 1 1528.1 133.93 HUMAN 1 -0.1117 -0.088 FDSSLLSSDDETKCK-p R4GMW8;S1017-p FDSSLLSSDDETKCK 0.835549798040352 0.00739033881289099 -0.0513333333333333 0.708 1.50744289582354 30.4777498052268 -0.0513333333333334 0.708 0.706733552961311 0.000895828797959881 -0.39673091108397 6.56817735386238 R4GMW8 NotFound R4GMW8.S1017.p_NotFound R4GMW8_S1017s _1_1_1017_1017 R4GMW8 R4GMW8|A0A1W2PS85|P28715 BIVM-ERCC5 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21361.21361.2 10.75 10.75 1.127 5 1 1 0 991.4745 1901.9744 S1017s TMT10 1010 (K) FDSSLLSsDDETK (C) FDS(0.0)S(0.0)LLS(0.0)S(0.99)DDET(0.0)K K:TMT10,s:Phosphorylated S BIVM-ERCC5 185876.1 7 11 561.1 271.77 HUMAN 1 -1.5074 30.4777 FDTAGNGYCRSEGVV-p P49327;Y222-p FDTAGNGYCRSEGVV 0.272351392348832 0.335743382074166 -0.292 -0.231333333333333 10.7002037845054 6.28153191595359 -0.292 -0.231333333333333 0.0851098101090101 0.235421871811543 -2.10366667619944 -1.33423362505464 P49327 FASN P49327.Y222.p_FASN P49327_Y222y _1_1_222_222 P49327 P49327|A0A0U1RQF0 Fatty acid synthase GG20160819_MSz_CCLE_T4D7_pY_Injection_01.10273.10273.2 9.65 9.65 2.568 2 1 1 0 770.8246 1460.679 Y222y TMT10 214 (K) AFDTAGNGyCR (S) AFDT(0.0)AGNGY(0.99)CR C:Carbamidomethylation,y:Phosphorylated Y FASN 276046.1 1 1 94.1 29.31 HUMAN 1 -10.7002 -6.2815 FDVGGQRSERKKWIH-p A8MTJ3;S206-p FDVGGQRSERKKWIH 0.616085409051468 0.116650643720984 -0.0806666666666667 0.227666666666667 3.90462615974894 12.3080856646157 -0.0806666666666667 0.227666666666667 0.406946562220498 0.0587748370225716 -0.898854373504991 2.385876037438 A8MTJ3 GNAT3 A8MTJ3.S206.p_GNAT3 A8MTJ3_S206s _1_1_206_206 A8MTJ3 P04899|P63096|P08754|P19087|A8MTJ3|P11488 Guanine nucleotide-binding protein G(t) subunit alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11561.11561.3 9.01 4.43 99 1 1 1 0 530.914 1510.7634 S206s TMT10 198 (R) MFDVGGQRsER (K) MFDVGGQRS(1.0)ER s:Phosphorylated S GNAT3 40869.8 1 2 6110.1 13.92 HUMAN 1 -3.9046 12.3081 FDVQKALSGVLEQDR-p Q9Y450-2;S117-p FDVQKALSGVLEQDR 0.0171093022974706 0.00225740740261622 -1.02766666666667 -0.835333333333333 41.3052427627593 40.9766110004538 -1.02766666666667 -0.835333333333333 7.40415878385879e-05 7.98617642245662e-05 -10.7602474177662 -10.5794715477957 Q9Y450 HBS1L Q9Y450.2.S117.p_HBS1L Q9Y450-2_S117s _1_1_117_117 Q9Y450-2 Q9Y450|Q9Y450-4|Q9Y450-2|E9PLR4|G5E991 Isoform 2 of HBS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21191.21191.3 15.48 15.48 6.683 2 1 1 0 727.7398 2101.2381 S117s TMT10 115 (K) ALsGVLEQDRVQSLK (D) ALS(0.99)GVLEQDRVQS(0.0)LK K:TMT10,s:Phosphorylated S HBS1L 70811.6 2 5 2070.1 99.42 HUMAN 1 -41.3052 -40.9766 FDVRSRTSVQTEDDQ-p P35221;S655-p FDVRSRTSVQTEDDQ 0.481582669423829 0.019429497948105 0.103666666666667 0.428 5.83941925378499 23.5064986119499 0.103666666666667 0.428 0.260650207273458 0.00446015692212524 1.25590414139614 4.66981464531218 P35221 CTNNA1 P35221.S655.p_CTNNA1 P35221_S655sT658t_2_2_655_658 P35221 P26232|P26232-5|P35221-2|P26232-2|P26232-3|G3XAM7|P26232-6|A0A0A0MRI5|P26232-4|P35221-3|A0A0A0MTJ6 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15887.15887.2 9.31 9.31 1.896 4 2 2 0 1104.4926 2048.0457 S655s T658t TMT10 654 (R) TsVQtEDDQLIAGQSAR (A) T(0.0)S(0.99)VQT(0.99)EDDQLIAGQS(0.0)AR s:Phosphorylated S,t:Phosphorylated T CTNNA1 100754.2 14 27 169.1 491.55 HUMAN 1 5.8394 23.5065 FDWAARFSPKVSLPK-p Q14669-3;S309-p FDWAARFSPKVSLPK 0.879293527813122 0.00112006726578317 -0.0346666666666667 -1.238 1.09931126049175 49.4673461970263 -0.0346666666666667 -1.238 0.776370229971149 1.13048649954731e-05 -0.298607389413913 -15.3344856069394 Q14669 TRIP12 Q14669.3.S309.p_TRIP12 Q14669-3_S309s _1_1_309_309 Q14669-3 Q14669-3|Q14669-2|G5E9G6 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19029.19029.5 16.78 16.78 6.237 4 1 1 0 502.6703 2429.3544 S309s TMT10 296 (K) TGGSSKFDWAARFsPK (V) T(0.0)GGS(0.0)S(0.0)KFDWAARFS(0.99)PK K:TMT10,s:Phosphorylated S TRIP12 227456.1 5 7 234.1 420.47 HUMAN 1 -1.0993 -49.4673 FDYRGRLSPVPVPRA-p Q9UKM9-2;S119-p FDYRGRLSPVPVPRA 0.864479811481231 0.0385261131788926 0.026 0.276 1.23184225694696 18.9994490382623 0.026 0.276 0.753036061585911 0.0125908513377104 0.331063505721702 3.6642233986009 Q9UKM9 RALY Q9UKM9.2.S119.p_RALY Q9UKM9-2_S119s _1_1_119_119 Q9UKM9-2 Q9UKM9|Q9UKM9-2 Isoform 1 of RNA-binding protein Raly HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8625.8625.2 11.53 11.53 99 1 1 1 0 579.3134 1077.6527 S119s Hydrogen 116 (R) GRLsPVPVPR (A) GRLS(1.0)PVPVPR s:Phosphorylated S RALY 30420.5 20 6 967.1 193.88 HUMAN 1 1.2318 18.9994 FEAGPEASDDDLWTR-p O15417;S1989-p FEAGPEASDDDLWTR 0.761458213847895 0.84342475725858 -0.0503333333333333 0.02 2.2693080303365 1.03852133968621 -0.0503333333333333 0.02 0.593019804027014 0.787313804040825 -0.567649430094504 0.283485313132349 O15417 TNRC18 O15417.S1989.p_TNRC18 O15417_S1989s _1_1_1989_1989 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18399.18399.3 19.44 19.44 6.821 2 1 1 0 861.7251 2503.1939 S1989s Hydrogen 1976 (R) GPKEPGFEAGPEAsDDDLWTR (R) GPKEPGFEAGPEAS(0.99)DDDLWT(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S TNRC18 316168 4 20 75.1 647.68 HUMAN 1 -2.2693 1.0385 FEATDSRTPEVPAGE-p Q9H2D6;T1997-p FEATDSRTPEVPAGE 0.398962840085262 0.0829486901985668 0.117 -0.210333333333333 7.36298721588429 14.3136691943777 0.117 -0.210333333333333 0.183527554807863 0.0370367679529079 1.52441445412753 -2.74899870322651 Q9H2D6 TRIOBP Q9H2D6.T1997.p_TRIOBP Q9H2D6_T1997t _1_1_1997_1997 Q9H2D6 Q9H2D6 TRIO and F-actin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17999.17999.3 15.94 13.7 1.161 3 1 1 0 804.3777 2331.1567 T1997t TMT10 1989 (K) WFEATDSRtPEVPAGEGPR (R) WFEAT(0.0)DS(0.0)RT(0.99)PEVPAGEGPR t:Phosphorylated T TRIOBP 264280.7 1 7 1168.1 170.4 HUMAN 1 7.363 -14.3137 FEAVKRFSLDERSLA-p Q7LBC6;S798-p FEAVKRFSLDERSLA 0.638563824318686 0.0840365847918056 0.07 0.265666666666667 3.63371356493988 14.2393064300562 0.07 0.265666666666667 0.433140350375287 0.0376763963528287 0.846432366031843 2.73528737074999 Q7LBC6 KDM3B Q7LBC6.S798.p_KDM3B Q7LBC6_S798s _1_1_798_798 Q7LBC6 Q7LBC6|Q7LBC6-2 Lysine-specific demethylase 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9767.9767.2 8.64 1.6 99 1 1 1 0 616.3053 1151.637 S798s TMT10 796 (K) RFsLDER (S) RFS(1.0)LDER s:Phosphorylated S KDM3B 193289 2 13 305.1 374.1 HUMAN 1 3.6337 14.2393 FEDHSHVSPGATKIA-p Q9NXL9;S942-p FEDHSHVSPGATKIA 0.795842244766724 0.776385332570271 -0.0673333333333333 -0.056 1.91668976967584 1.52048505641537 -0.0673333333333333 -0.056 0.643177766222508 0.704614367344056 -0.490272315544061 -0.399738998104072 Q9NXL9 MCM9 Q9NXL9.S942.p_MCM9 Q9NXL9_S942sT946t_2_2_942_946 Q9NXL9 Q9NXL9|Q9NXL9-4 DNA helicase MCM9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17016.17016.4 7.62 7.62 7.618 5 2 2 0 731.8704 2764.5349 S942s T946t TMT10 929 (K) SKLIHSFEDHSHVsPGAtK (I) S(0.0)KLIHS(0.0)FEDHS(0.0)HVS(0.99)PGAT(0.99)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T MCM9 128793.8 2 8 1757.1 117.14 HUMAN 1 -1.9167 -1.5205 FEDKLPKSWRYPPNA-p Q9P225-2;S2376-p FEDKLPKSWRYPPNA 0.836372411785846 0.0116327352591839 0.093 0.636666666666667 1.49894120574555 27.0520456386594 0.093 0.636666666666667 0.708118400049022 0.00197149389307018 0.394739616293832 5.57527098065669 Q9P225 DNAH2 Q9P225.2.S2376.p_DNAH2 Q9P225-2_S2376sY2386y_2_2_2376_2386 Q9P225-2 Q9P225-2 Isoform 2 of Dynein heavy chain 2, axonemal HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.31083.31083.3 10.21 5.39 2.355 3 2 2 0 715.6781 1984.0845 S2376s N2382n Y2386y TMT10 2376 (K) sWRYPPnAPFyK (I) S(0.99)WRY(0.0)PPN(1.0)APFY(0.99)K K:TMT10,s:Phosphorylated S,n:Deamidated,y:Phosphorylated Y DNAH2 485128 1 4 4981.1 24.26 HUMAN 1 1.4989 27.052 FEDQRVHSPPRFTNQ-p Q9BTC0;S1974-p FEDQRVHSPPRFTNQ 0.584245183878784 0.0194700280248547 0.109 -0.418666666666667 4.29585947270096 23.4911545087191 0.109 -0.418666666666667 0.371889616588086 0.00447594301923914 0.973277578728974 -4.66613427983191 Q9BTC0 DIDO1 Q9BTC0.S1974.p_DIDO1 Q9BTC0_S1974s _1_1_1974_1974 Q9BTC0 Q9BTC0 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10507.10507.4 10.81 10.81 99 1 1 1 0 582.7927 2248.1784 S1974s TMT10 1961 (R) GIQPQQFEDQRVHsPPR (F) GIQPQQFEDQRVHS(1.0)PPR s:Phosphorylated S DIDO1 245579.9 3 23 153.1 505.54 HUMAN 1 4.2959 -23.4912 FEDRDSDSQDEVVVE-p E7ESJ3;S363-p FEDRDSDSQDEVVVE 0.584955524756353 0.0332134613456164 0.0786666666666667 0.268666666666667 4.28209910792394 19.9378467169768 0.0786666666666667 0.268666666666667 0.373069795603388 0.0101441421954921 0.970683453465917 3.86202475727323 E7ESJ3 NotFound E7ESJ3.S363.p_NotFound E7ESJ3_S363s _1_1_363_363 E7ESJ3 E7ESJ3|Q9UPS8-3 Ankyrin repeat domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26356.26578.3 25.85 25.85 1.23 7 1 1 0 1116.8895 3268.6837 S363s TMT10 354 (R) TLFEDRDSDsQDEVVVESLPTTSIK (V) T(0.0)LFEDRDS(0.0)DS(0.99)QDEVVVES(0.0)LPT(0.0)T(0.0)S(0.0)IK K:TMT10,s:Phosphorylated S ANKRD26 199524.4 4 3 812.1 221.02 HUMAN 1 4.2821 19.9378 FEDRKDDSDDDGGGW-p Q9ULX3;S201-p FEDRKDDSDDDGGGW 0.970473389050183 0.192167085892998 -0.00933333333333333 -0.212333333333333 0.257066030505061 9.41699765605672 -0.00933333333333334 -0.212333333333333 0.942526125222087 0.114366869716427 -0.0755046291940928 -1.87986438266238 Q9ULX3 NOB1 Q9ULX3.S201.p_NOB1 Q9ULX3_S201s _1_1_201_201 Q9ULX3 Q9ULX3 RNA-binding protein NOB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19453.19453.3 21.29 21.29 6.05 3 1 1 0 896.4428 2607.3505 S201s TMT10 198 (R) KDDsDDDGGGWITPSNIK (Q) KDDS(0.99)DDDGGGWIT(0.0)PS(0.0)NIK K:TMT10,s:Phosphorylated S NOB1 47073.5 5 2 2602.1 77.05 HUMAN 1 -0.2571 -9.417 FEECLKDSPRFRAAL-p Q15057;S14-p FEECLKDSPRFRAAL 0.269642531977865 0.770335785211533 -0.187666666666667 -0.0586666666666667 10.7866213765758 1.56596363060771 -0.187666666666667 -0.0586666666666666 0.0834330004904879 0.697274265610339 -2.11876774916875 -0.410337575776475 Q15057 ACAP2 Q15057.S14.p_ACAP2 Q15057_S14s _1_1_14_14 Q15057 Q15057|A0A087X1H5|F8WAU0 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20889.20889.4 16.78 16.78 9.04 2 1 1 0 642.8159 2488.2729 S14s TMT10 3 (K) MTVDFEECLKDsPRFR (A) MT(0.0)VDFEECLKDS(0.99)PRFR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ACAP2 88997 1 1 629.1 257.13 HUMAN 1 -10.7866 -1.566 FEEEHKDSDDDSSDD-p Q13435;S431-p FEEEHKDSDDDSSDD 0.374495428006811 0.0242864145896889 -0.166666666666667 0.317666666666667 7.89806051643868 22.0018770321415 -0.166666666666667 0.317666666666667 0.162253453126635 0.0063068470198368 -1.61747172941175 4.31779211712615 Q13435 SF3B2 Q13435.S431.p_SF3B2 Q13435_S431sS435sS436s_3_3_431_436 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11544.11963.4 12.33 12.33 99 3 3 3 0 817.825 3028.3746 S431s S435s S436s TMT10 423 (K) GFEEEHKDsDDDssDDEQEK (K) GFEEEHKDS(1.0)DDDS(1.0)S(1.0)DDEQEK K:TMT10,s:Phosphorylated S SF3B2 100339.9 25 19 193.1 462.57 HUMAN 1 -7.8981 22.0019 FEEEKQESPKSTFSP-p Q92576;S1178-p FEEEKQESPKSTFSP 0.231958962225758 0.00313960863177787 -0.313666666666667 0.959666666666667 12.2068163136605 37.5772877572781 -0.313666666666667 0.959666666666667 0.060161460201113 0.000174691278899954 -2.36907263126251 9.09327256123833 Q92576 PHF3 Q92576.S1178.p_PHF3 Q92576_S1178s _1_1_1178_1178 Q92576 Q92576|Q92576-2 PHD finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36343.36343.5 27.13 20.56 1.109 8 1 1 0 902.2387 4427.1981 S1178s TMT10 1147 (K) HSDNEAESIADALSSTSNILASEFFEEEKQEsPK (S) HS(0.0)DNEAES(0.0)IADALS(0.0)S(0.0)T(0.0)S(0.0)NILAS(0.0)EFFEEEKQES(0.99)PK K:TMT10,s:Phosphorylated S PHF3 231702.4 4 9 96.1 606.54 HUMAN 1 -12.2068 37.5773 FEEGKKISLPGQMAG-p Q9H8Y8-3;S226-p FEEGKKISLPGQMAG 0.418385958703744 0.168121208688809 -0.149 0.159666666666667 6.98261755259641 10.1867802330061 -0.149 0.159666666666667 0.200326426849802 0.0957903977759576 -1.4579701628846 2.01334868463016 Q9H8Y8 GORASP2 Q9H8Y8.3.S226.p_GORASP2 Q9H8Y8-3_S226s _1_1_226_226 Q9H8Y8-3 Q9H8Y8-3|Q9H8Y8-2 Isoform 3 of Golgi reassembly-stacking protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25864.25864.4 16.05 16.05 3.517 3 1 1 0 630.6219 2439.4976 S226s TMT10 224 (K) KIsLPGQMAGTPITPLK (D) KIS(0.99)LPGQMAGT(0.0)PIT(0.0)PLK K:TMT10,s:Phosphorylated S GORASP2 48958.5 4 1 992.1 191.2 HUMAN 1 -6.9826 10.1868 FEEPDSASVKTYPRS-p Q8N9T8;S309-p FEEPDSASVKTYPRS 0.371512147830027 0.882523632291108 -0.122666666666667 -0.025 7.97473991941911 0.762562138648998 -0.122666666666667 -0.025 0.159413834405095 0.838964889609462 -1.630778340115 -0.213190803289041 Q8N9T8 KRI1 Q8N9T8.S309.p_KRI1 Q8N9T8_S309s _1_1_309_309 Q8N9T8 Q8N9T8 Protein KRI1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18645.18645.3 12.26 12.26 1.137 3 1 1 0 743.0347 2147.1173 S309s TMT10 298 (K) YNFRFEEPDSAsVK (T) Y(0.0)NFRFEEPDS(0.0)AS(0.99)VK K:TMT10,s:Phosphorylated S KRI1 83053 2 4 863.1 210.23 HUMAN 1 -7.9747 -0.7626 FEESEELSSDEEMKM-p Q96RT1-8;S602-p FEESEELSSDEEMKM 0.284101767600348 0.0123363927352173 -0.185333333333333 0.405 10.3095513406674 26.6495605138038 -0.185333333333333 0.405 0.0931204070983663 0.00216293739204588 -2.03554517173085 5.46664463783877 Q96RT1 ERBB2IP Q96RT1.8.S602.p_ERBB2IP Q96RT1-8_S602sS603s_2_2_602_603 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5|Q96RT1-4|Q96RT1-6|Q96RT1-7 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18194.18194.3 24.86 24.86 3.308 3 2 2 0 1079.4655 3076.4457 S602s S603s TMT10 587 (K) HIVNHDDVFEESEELssDEEMK (M) HIVNHDDVFEES(0.0)EELS(0.99)S(0.99)DEEMK K:TMT10,s:Phosphorylated S ERBIN 159762.8 8 32 81.1 633.5 HUMAN 1 -10.3096 26.6496 FEGKANESSPKPVGP-p Q9BQI0-2;S159-p FEGKANESSPKPVGP 0.171753109345633 0.411254989786089 -0.316 -0.0876666666666667 15.2337840798641 5.13358553599026 -0.316 -0.0876666666666667 0.0299655043707343 0.30664892489681 -2.92241366540785 -1.12824970331636 Q9BQI0 AIF1L Q9BQI0.2.S159.p_AIF1L Q9BQI0-2_S159s _1_1_159_159 Q9BQI0-2 Q9BQI0-2|Q9BQI0-3|A6PVM9 Isoform 2 of Allograft inflammatory factor 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7808.7808.4 12.54 12.54 1.104 2 1 1 0 525.7781 2020.1228 S159s TMT10 156 (K) ANEsSPKPVGPPPER (D) ANES(0.99)S(0.0)PKPVGPPPER K:TMT10,s:Phosphorylated S AIF1L 20243.1 6 3 4187.1 35.73 HUMAN 1 -15.2338 -5.1336 FEGPNKLSPRIDGPP-p O94913;S777-p FEGPNKLSPRIDGPP 0.252409750747624 0.896916293211812 -0.174666666666667 0.0146666666666667 11.4062416590092 0.662660488915186 -0.174666666666667 0.0146666666666667 0.0723395552077348 0.858487450792305 -2.22743881878689 0.186961705385997 O94913 PCF11 O94913.S777.p_PCF11 O94913_S777s _1_1_777_777 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19767.19767.3 12.92 9.21 99 1 1 1 0 643.0143 1847.0613 S777s TMT10 768 (K) MIFEGPNKLsPR (I) MIFEGPNKLS(1.0)PR K:TMT10,s:Phosphorylated S PCF11 173731.7 5 13 508.1 288.88 HUMAN 1 -11.4062 0.6627 FEHDPSESIDEFNKS-p Q9NYF8;S198-p FEHDPSESIDEFNKS 0.878395260815069 0.0113009810176605 0.0233333333333333 0.587666666666667 1.10738136400389 27.2577676219763 0.0233333333333333 0.587666666666667 0.774928910594321 0.00188028307913799 0.300601178641148 5.6314098989844 Q9NYF8 BCLAF1 Q9NYF8.S198.p_BCLAF1 Q9NYF8_S198s _1_1_198_198 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|Q9NYF8-4|A0A1W2PQ43|E9PJA7 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16205.16205.4 23.14 21.02 2.18 4 1 1 0 844.6512 3295.621 S198s TMT10 183 (K) SQEEPKDTFEHDPSEsIDEFNK (S) S(0.0)QEEPKDT(0.0)FEHDPS(0.0)ES(0.99)IDEFNK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 7 5 10.1 1293.04 HUMAN 1 1.1074 27.2578 FEIEKRLSHSQERLV-p P12270;S62-p FEIEKRLSHSQERLV 0.207422631751664 0.0245293871244246 0.291 0.344333333333333 13.1855833169172 21.9186915605478 0.291 0.344333333333333 0.0480221575579006 0.00642881375005095 2.54456244668133 4.29883663442255 P12270 TPR P12270.S62.p_TPR P12270_S62s _1_1_62_62 P12270 P12270|P12270-2 Nucleoprotein TPR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.2891.2891.3 8.43 8.43 8.43 2 1 1 0 441.2242 1241.6912 S62s TMT10 60 (K) RLsHSQER (L) RLS(0.99)HS(0.0)QER s:Phosphorylated S TPR 267687.4 1 1 385.1 333.55 HUMAN 1 13.1856 21.9187 FEIHTPVSDKKKKKC-p Q15361;S15-p FEIHTPVSDKKKKKC 0.436275274362594 0.0281558139299147 0.108 -0.347666666666667 6.63044023987496 21.0089981001329 0.108 -0.347666666666667 0.217248094552978 0.00792684178433863 1.39615566711251 -4.09483575618769 Q15361 TTF1 Q15361.S15.p_TTF1 Q15361_T12tS15s_2_2_12_15 Q15361 Q15361 Transcription termination factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10864.10891.4 7.83 7.83 99 2 2 2 0 569.8085 2116.2733 T12t S15s Hydrogen 8 (R) FEIHtPVsDKKK (K) FEIHT(1.0)PVS(1.0)DKKK K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S TTF1 103505.6 1 7 1295.1 156.82 HUMAN 1 6.6304 -21.009 FEISRPQSPESERDI-p O95259;S978-p FEISRPQSPESERDI 0.82076075173092 0.741930775864774 0.0356666666666667 -0.0433333333333333 1.65456488876399 1.78702120556086 0.0356666666666667 -0.0433333333333333 0.683193162351253 0.662670869017012 0.430867248061529 -0.461050643939516 O95259 KCNH1 O95259.S978.p_KCNH1 O95259_S978s _1_1_978_978 O95259 O95259|O95259-2|A0A1W2PPA2|A0A0S1TJ81 Potassium voltage-gated channel subfamily H member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24361.24361.3 15.59 15.59 1.344 7 1 1 0 1106.516 3237.5861 S978s TMT10 963 (R) SSQSPQELFEISRPQsPESERDIFGAS (-) S(0.0)S(0.0)QS(0.0)PQELFEIS(0.0)RPQS(0.99)PES(0.0)ERDIFGAS(0.0) s:Phosphorylated S KCNH1 112504.8 2 4 2720.1 72.93 HUMAN 1 1.6546 -1.787 FEKDHRLSDKDLRDL-p Q9NRA8;S173-p FEKDHRLSDKDLRDL 0.77921925113358 0.29683697195358 -0.0396666666666667 -0.136666666666667 2.08074137201369 6.96269961053032 -0.0396666666666667 -0.136666666666667 0.619335341041217 0.201247289112979 -0.52660946790964 -1.45408280011693 Q9NRA8 EIF4ENIF1 Q9NRA8.S173.p_EIF4ENIF1 Q9NRA8_S173s _1_1_173_173 Q9NRA8 Q9NRA8-3|B1AKL4 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5311.5311.4 7.34 3.42 99 1 1 1 0 448.9941 1712.9808 S173s TMT10 169 (K) DHRLsDKDLR (D) DHRLS(1.0)DKDLR K:TMT10,s:Phosphorylated S EIF4ENIF1 108541.3 2 6 150.1 511.59 HUMAN 1 -2.0807 -6.9627 FEKLDRASPDLWPEQ-p Q52LA3;S28-p FEKLDRASPDLWPEQ 0.595851611109755 0.00314689951461765 0.092 0.653333333333333 4.14944386656164 37.5607224496546 0.092 0.653333333333333 0.384641033890365 0.000175358876776938 0.945590287221745 9.08651745030956 Q52LA3 LIN52 Q52LA3.S28.p_LIN52 Q52LA3_S28s _1_1_28_28 Q52LA3 Q52LA3 Protein lin-52 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.36518.36518.3 24.4 24.4 16.07 2 1 1 0 1061.5513 3102.6664 S28s TMT10 24 (K) LDRAsPDLWPEQLPGVAEFAASFK (S) LDRAS(0.99)PDLWPEQLPGVAEFAAS(0.0)FK K:TMT10,s:Phosphorylated S LIN52 13000.7 10 1 2091.1 97.98 HUMAN 1 4.1494 37.5607 FEKMQGQSPPAPTRG-p Q14008-3;S816-p FEKMQGQSPPAPTRG 0.844961679073681 0.167123906469835 0.0276666666666667 0.163 1.41331319579383 10.2192919964212 0.0276666666666667 0.163 0.722218618918629 0.0950759777540968 0.374565159175299 2.01899931658411 Q14008 CKAP5 Q14008.3.S816.p_CKAP5 Q14008-3_S816s _1_1_816_816 Q14008-3 Q14008-3|Q14008-2 Isoform 3 of Cytoskeleton-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6809.6809.2 14.29 9.92 3.326 2 1 1 0 739.8546 1398.7361 S816s TMT10 812 (K) MQGQsPPAPTR (G) MQGQS(0.99)PPAPT(0.0)R s:Phosphorylated S CKAP5 228079.2 1 2 1323.1 154.15 HUMAN 1 1.4133 10.2193 FEKTYKGSEEELADI-p Q8WXX5;S123-p FEKTYKGSEEELADI 0.995103621521408 0.0676290831733223 0.00133333333333333 0.230333333333333 0.0423797608220006 15.5641706934482 0.00133333333333333 0.230333333333333 0.990289157169136 0.0277704508581785 0.012743403104415 2.98290984850755 Q8WXX5 DNAJC9 Q8WXX5.S123.p_DNAJC9 Q8WXX5_S123s _1_1_123_123 Q8WXX5 Q8WXX5 DnaJ homolog subfamily C member 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16461.16461.3 11.09 6.57 2.199 3 1 1 0 750.7347 2170.221 S123s TMT10 119 (K) TYKGsEEELADIK (Q) T(0.0)Y(0.0)KGS(0.99)EEELADIK K:TMT10,s:Phosphorylated S DNAJC9 30080.4 1 2 5004.1 23.98 HUMAN 1 0.0424 15.5642 FENHRIVSPKNSDLK-p Q8TEP8-3;S959-p FENHRIVSPKNSDLK 0.673156700289378 0.0620484821976619 0.138333333333333 -0.756333333333333 3.22085173791696 16.0698823891738 0.138333333333333 -0.756333333333333 0.47633755836835 0.0247179108242087 0.764923658005995 -3.07943224892346 Q8TEP8 NotFound Q8TEP8.3.S959.p_NotFound Q8TEP8-3_S959s _1_1_959_959 Q8TEP8-3 Q8TEP8-3|A0A0A0MR42|Q8TEP8-2 Isoform 3 of Centrosomal protein of 192 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14635.14635.3 8.14 8.14 8.144 2 1 1 0 623.3672 1788.1198 S959s TMT10 957 (R) IVsPKNSDLK (N) IVS(0.99)PKNS(0.0)DLK K:TMT10,s:Phosphorylated S CEP192 281787.5 1 10 491.1 293.99 HUMAN 1 3.2209 -16.0699 FENKRSASLETKKDV-p G3V1L9;S1278-p FENKRSASLETKKDV 0.116919432552122 0.801640707500314 -0.432 -0.038 19.3999121343525 1.34313513726605 -0.432 -0.038 0.0114817685096125 0.733983819789189 -3.75133215941148 -0.357828630167889 G3V1L9 TJP1 G3V1L9.S1278.p_TJP1 G3V1L9_S1278s _1_1_1278_1278 G3V1L9 G3V1L9|Q07157|G5E9E7|A0A087X0K9|Q07157-2 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9548.9548.2 10.98 10.98 10.985 3 1 1 0 815.9725 1550.9721 S1278s TMT10 1276 (R) SAsLETKK (D) S(0.0)AS(0.99)LET(0.0)KK K:TMT10,s:Phosphorylated S TJP1 197797.8 2 57 41.2 827.72 HUMAN 1 -19.3999 -1.3431 FEPAVLLTPPRQKSN-p Q8N0Z3;T537-p FEPAVLLTPPRQKSN 0.807190843839437 0.909031887630889 -0.0533333333333333 0.0176666666666667 1.79123787810268 0.579997233305578 -0.0533333333333333 0.0176666666666667 0.66202777772713 0.874984332640344 -0.462057250566568 0.164915928153184 Q8N0Z3 SPICE1 Q8N0Z3.T537.p_SPICE1 Q8N0Z3_T537t _1_1_537_537 Q8N0Z3 Q8N0Z3 Spindle and centriole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25550.25550.4 19.41 19.41 99 1 1 1 0 679.1292 2633.5332 T537t TMT10 524 (K) NFPAHIFEPAVLLtPPRQK (S) NFPAHIFEPAVLLT(1.0)PPRQK K:TMT10,t:Phosphorylated T SPICE1 96605.1 1 6 556.1 273.19 HUMAN 1 -1.7912 0.58 FEPDYNESDSESNVS-p Q7Z6E9;S1644-p FEPDYNESDSESNVS 0.668062231327386 0.251123859717077 -0.0873333333333333 0.119666666666667 3.27726341044324 7.90459987111274 -0.0873333333333333 0.119666666666667 0.470190293012111 0.162009325121067 -0.776186341278593 1.61810032926684 Q7Z6E9 RBBP6 Q7Z6E9.S1644.p_RBBP6 Q7Z6E9_S1644s_1_1_1644_1644 Q7Z6E9 Q7Z6E9|Q7Z6E9-2|Q7Z6E9-4 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18495.18495.4 22.28 21.58 1.129 9 1 1 0 1098.5076 4310.0199 N1642n S1644s TMT10 1631 (R) ETDEAAFEPDYnEsDSESNVSVKEEESSGNISK (D) ET(0.0)DEAAFEPDY(0.0)N(0.99)ES(0.99)DS(0.0)ES(0.0)N(0.0)VS(0.0)VKEEES(0.0)S(0.0)GN(0.0)IS(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S RBBP6 202473.6 2 24 27.1 935.6 HUMAN 1 -3.2773 7.9046 FEPEFVISPRPKEEP-p Q9H9A7;S292-p FEPEFVISPRPKEEP 0.0832139716415161 0.153808287910872 -0.468333333333333 -0.186666666666667 23.0738045112861 10.6915393160583 -0.468333333333333 -0.186666666666667 0.00492741962476747 0.0852797794263826 -4.57189642875173 -2.1012364468765 Q9H9A7 RMI1 Q9H9A7.S292.p_RMI1 Q9H9A7_S292s _1_1_292_292 Q9H9A7 Q9H9A7 RecQ-mediated genome instability protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21741.21741.3 18.92 17.22 7.173 3 1 1 0 762.7354 2206.2272 S292s TMT10 282 (R) QSSFEPEFVIsPRPK (E) QS(0.0)S(0.0)FEPEFVIS(0.99)PRPK K:TMT10,s:Phosphorylated S RMI1 70713.7 3 6 2180.1 94.33 HUMAN 1 -23.0738 -10.6915 FEPSTMVYDACRIIR-p Q9Y490;Y26-p FEPSTMVYDACRIIR 0.620504869032167 0.878845470662026 0.088 -0.0203333333333333 3.85229580648247 0.78735974284642 0.088 -0.0203333333333333 0.411879729976744 0.834188168249178 0.888788419623704 -0.219633972878461 Q9Y490 TLN1 Q9Y490.Y26.p_TLN1 Q9Y490_Y26y _1_1_26_26 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21662.21662.3 14.62 14.62 3.007 4 1 1 0 715.6394 2064.939 Y26y TMT10 16 (K) TMQFEPSTMVyDACR (I) T(0.0)MQFEPS(0.0)T(0.0)MVY(0.99)DACR C:Carbamidomethylation,y:Phosphorylated Y TLN1 271930.4 1 2 267.1 395.2 HUMAN 1 3.8523 -0.7874 FEQEQLGSPQVRAGS-p Q92585;S314-p FEQEQLGSPQVRAGS 0.459669547884547 0.240756745073236 -0.105333333333333 0.12 6.22408079512109 8.1480656014931 -0.105333333333333 0.12 0.238556865896141 0.153176957787658 -1.3243851849762 1.66030014001823 Q92585 MAML1 Q92585.S314.p_MAML1 Q92585_S314s _1_1_314_314 Q92585 Q92585 Mastermind-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23315.23315.3 13.28 13.28 13.283 3 1 1 0 810.7233 2350.1877 S314s TMT10 300 (K) TEFSPAAFEQEQLGsPQVR (A) T(0.0)EFS(0.0)PAAFEQEQLGS(0.99)PQVR s:Phosphorylated S MAML1 108508.8 2 7 1563.1 131.35 HUMAN 1 -6.2241 8.1481 FERGNMNSEPEEEDG-p Q8IVW6;S89-p FERGNMNSEPEEEDG 0.2592179584854 0.363094882949464 -0.214666666666667 0.106 11.1408843096179 5.83312013976 -0.214666666666667 0.106 0.0768973846032519 0.261028535049097 -2.18080964849943 1.25448699091953 Q8IVW6 ARID3B Q8IVW6.S89.p_ARID3B Q8IVW6_S89s _1_1_89_89 Q8IVW6 Q8IVW6|Q8IVW6-4|Q8IVW6-3 AT-rich interactive domain-containing protein 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19472.19472.3 21.98 21.29 99 1 1 1 0 1216.1775 3566.5488 S89s TMT10 85 (R) GNMNsEPEEEDGGLEDEDGDDEVAEVAEK (E) GNMNS(1.0)EPEEEDGGLEDEDGDDEVAEVAEK K:TMT10,s:Phosphorylated S ARID3B 60750.1 5 1 3894.1 41.23 HUMAN 1 -11.1409 5.8331 FESERRGSHPYIDFR-p Q13946;S84-p FESERRGSHPYIDFR 0.988065176179498 0.00246432253845191 0.00333333333333333 0.744666666666667 0.107098689451315 39.9591474010183 0.00333333333333333 0.744666666666667 0.975641198564605 0.00010094510402069 0.0319711406693435 10.1130014858507 Q13946 PDE7A Q13946.S84.p_PDE7A Q13946_S84s _1_1_84_84 Q13946 Q13946|Q13946-2|Q13946-3 High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9243.9243.3 13.31 8.02 4.592 2 1 1 0 519.5904 1476.7909 S84s TMT10 82 (R) RGsHPYIDFR (I) RGS(0.99)HPY(0.0)IDFR s:Phosphorylated S PDE7A 56017.5 5 1 5233.1 21.49 HUMAN 1 0.1071 39.9591 FESKASESISLKNLK-p Q8WWI1-3;S853-p FESKASESISLKNLK 0.664425582516381 0.968675141143769 0.078 0.00533333333333336 3.32170376911169 0.195862758803323 0.078 0.00533333333333337 0.46540347650634 0.955902778846537 0.785029696322975 0.0578993197827221 Q8WWI1 LMO7 Q8WWI1.3.S853.p_LMO7 Q8WWI1-3_S853s _1_1_853_853 Q8WWI1-3 Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14472.14472.2 12.68 12.68 2.222 3 1 1 0 686.8799 1292.7826 S853s TMT10 850 (K) ASEsISLK (N) AS(0.0)ES(0.99)IS(0.0)LK K:TMT10,s:Phosphorylated S LMO7 154694.3 1 22 61.1 704.74 HUMAN 1 3.3217 0.1959 FESSYRNSLDSFGGR-p Q5BKZ1;S118-p FESSYRNSLDSFGGR 0.286385530635832 0.406358411999086 0.15 -0.145333333333333 10.2472998526776 5.20699457954061 0.15 -0.145333333333333 0.0944648011547203 0.301509181719244 2.02470954434808 -1.14162027921038 Q5BKZ1 ZNF326 Q5BKZ1.S118.p_ZNF326 Q5BKZ1_S118s _1_1_118_118 Q5BKZ1 Q5BKZ1 DBIRD complex subunit ZNF326 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14905.14905.3 16.38 16.38 3.858 5 1 1 0 677.6399 1950.9507 S118s TMT10 111 (R) FESSYRNsLDSFGGR (N) FES(0.0)S(0.0)Y(0.0)RNS(0.99)LDS(0.0)FGGR s:Phosphorylated S ZNF326 65995 1 6 1326.1 153.85 HUMAN 1 10.2473 -5.207 FETLVEDSAEEESTL-p Q9Y4L1;S567-p FETLVEDSAEEESTL 0.463415485914398 0.0914364449085443 0.126 -0.189 6.1610644226837 13.7386321767729 0.126 -0.189 0.242043574367407 0.0422801755952739 1.31320555049519 -2.64350505921603 Q9Y4L1 HYOU1 Q9Y4L1.S567.p_HYOU1 Q9Y4L1_S567s _1_1_567_567 Q9Y4L1 Q9Y4L1|A0A087X054|K7EQK2|A0A087WWI4|Q9Y4L1-2 Hypoxia up-regulated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32450.32450.3 16.89 16.89 3.747 6 1 1 0 960.8101 2800.4392 S567s TMT10 556 (R) VESVFETLVEDsAEEESTLTK (L) VES(0.0)VFET(0.0)LVEDS(0.99)AEEES(0.0)T(0.0)LT(0.0)K K:TMT10,s:Phosphorylated S HYOU1 111561.6 1 1 5720.1 16.89 HUMAN 1 6.1611 -13.7386 FEVGAPMSPKMSNMG-p Q96JM2-3;S1090-p FEVGAPMSPKMSNMG 0.797447525031717 0.930938262261506 -0.036 0.011 1.89727303064532 0.438628491577901 -0.036 0.011 0.646059767731927 0.903934892633295 -0.485930290643539 0.126446978766015 Q96JM2 ZNF462 Q96JM2.3.S1090.p_ZNF462 Q96JM2-3_S1090s _1_1_1090_1090 Q96JM2-3 Q96JM2-3 Isoform 3 of Zinc finger protein 462 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27735.27735.3 19.84 19.84 8.298 4 1 1 0 782.0717 2264.2361 S1090s TMT10 1075 (R) GSALSQLSFEVGAPMsPK (M) GS(0.0)ALS(0.0)QLS(0.0)FEVGAPMS(0.99)PK K:TMT10,s:Phosphorylated S ZNF462 296246.7 3 4 736.1 235.26 HUMAN 1 -1.8973 0.4386 FEVGPGDSPTFPRFR-p Q16584;S524-p FEVGPGDSPTFPRFR 0.806694949927983 0.566392140524411 -0.035 -0.054 1.79570262409095 3.32975925526872 -0.035 -0.054 0.661347532601578 0.46454102565463 -0.46306805584293 -0.78651241865859 Q16584 MAP3K11 Q16584.S524.p_MAP3K11 Q16584_S524s _1_1_524_524 Q16584 Q16584|Q16584-2 Mitogen-activated protein kinase kinase kinase 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19371.19371.3 18.44 13.77 1.696 2 1 1 0 695.3422 2004.05 S524s TMT10 514 (R) RNVFEVGPGDsPTFPR (F) RNVFEVGPGDS(0.99)PT(0.0)FPR s:Phosphorylated S MAP3K11 93313.9 6 5 536.1 278.53 HUMAN 1 -1.7957 -3.3298 FEWKPASSLRRWLAV-p Q9BVG9;S310-p FEWKPASSLRRWLAV 0.500562123425219 0.191591714852994 -0.134333333333333 0.303666666666667 5.54068517832522 9.43874135763377 -0.134333333333333 0.303666666666667 0.279210330154276 0.113795703291104 -1.20228376569298 1.88362860128097 Q9BVG9 PTDSS2 Q9BVG9.S310.p_PTDSS2 Q9BVG9_S310s _1_1_310_310 Q9BVG9 Q9BVG9 Phosphatidylserine synthase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4110.4110.2 7.63 1.72 1.128 2 1 1 0 548.2971 1015.621 S310s TMT10 307 (K) PASsLRR (W) PAS(0.0)S(0.99)LRR s:Phosphorylated S PTDSS2 56822.4 1 2 4599.1 28.99 HUMAN 1 -5.5407 9.4387 FFCRRVESPALLASA-p O94762;S774-p FFCRRVESPALLASA 0.674993198467192 0.00544848158522519 0.062 0.638666666666667 3.19740664217393 32.8421676337969 0.062 0.638666666666667 0.478915988143479 0.000519736522904911 0.760230379595716 7.3325887111023 O94762 RECQL5 O94762.S774.p_RECQL5 O94762_S774s _1_1_774_774 O94762 O94762 ATP-dependent DNA helicase Q5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20616.20616.4 24.9 23.24 4.499 3 1 1 0 983.4754 3850.9178 S774s TMT10 771 (R) RVEsPALLASAPEAEGACPSCEGVQGPPMAPEK (Y) RVES(0.99)PALLAS(0.0)APEAEGACPS(0.0)CEGVQGPPMAPEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RECQL5 110568 1 3 823.1 218.4 HUMAN 1 3.1974 32.8422 FFDSRSKSLPSPHPV-p Q02224;S2651-p FFDSRSKSLPSPHPV 0.233099886492069 0.00805423549432613 0.514666666666667 -0.766 12.157725657457 29.8306958033156 0.514666666666667 -0.766 0.0608453556909433 0.00103975356874608 2.36034232876204 -6.37075422811148 Q02224 CENPE Q02224.S2651.p_CENPE Q02224_S2651s _1_1_2651_2651 Q02224 Q02224|Q02224-2|A0A087X0P0|Q02224-3 Centromere-associated protein E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8580.8580.3 8.79 8.79 8.791 2 1 1 0 433.5669 1218.7156 S2651s TMT10 2651 (K) sLPSPHPVR (Y) S(0.99)LPS(0.0)PHPVR s:Phosphorylated S CENPE 317778.9 1 5 2732.1 72.4 HUMAN 1 12.1577 -29.8307 FFEGTIASKGKGGAL-p P53621-2;S833-p FFEGTIASKGKGGAL 0.95874861706093 0.215907345596789 0.00766666666666666 -0.124 0.354355852927716 8.7611854012994 0.00766666666666666 -0.124 0.921646577535852 0.133009132168183 0.103034261796614 -1.7664067423143 P53621 COPA P53621.2.S833.p_COPA P53621-2_S833s _1_1_833_833 P53621-2 P53621-2 Isoform 2 of Coatomer subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23203.23203.2 11.11 11.11 1.887 2 1 1 0 797.919 1514.8619 S833s TMT10 825 (K) GFFEGTIAsK (G) GFFEGT(0.0)IAS(0.99)K K:TMT10,s:Phosphorylated S COPA 140918.9 2 9 545.1 275.81 HUMAN 1 0.3544 -8.7612 FFHGHDNYDQLVRIA-p E7EU96;Y239-p FFHGHDNYDQLVRIA 0.732651492896551 0.420216486251308 -0.057 -0.124333333333333 2.56003225568606 5.01266883719221 -0.057 -0.124333333333333 0.554621593686958 0.315306639773236 -0.629540034208206 -1.10615518841237 E7EU96 NotFound E7EU96.Y239.p_NotFound E7EU96_Y239y _1_1_239_239 E7EU96 P68400|E7EU96|P68400-2 Casein kinase II subunit alpha GG20160819_MSz_CCLE_T4D7_pY_Injection_01.15373.15373.4 15.25 15.25 99 1 1 1 0 635.8162 2460.2824 Y239y TMT10 229 (R) KEPFFHGHDNyDQLVR (I) KEPFFHGHDNY(1.0)DQLVR K:TMT10,y:Phosphorylated Y CSNK2A1 45481.2 2 1 236.1 15.25 HUMAN 1 -2.56 -5.0127 FFIDAPDSPATLAYR-p P53384;S290-p FFIDAPDSPATLAYR 0.560750702675546 0.972900041531255 -0.097 0.004 4.62933731368188 0.167662074743612 -0.097 0.00400000000000002 0.344402478840341 0.962130079774739 -1.0356721198881 0.0497142822433882 P53384 NUBP1 P53384.S290.p_NUBP1 P53384_S290s _1_1_290_290 P53384 P53384|P53384-2 Cytosolic Fe-S cluster assembly factor NUBP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26326.26326.3 15.27 15.27 2.954 4 1 1 0 755.6983 2185.1127 S290s TMT10 280 (K) GQSFFIDAPDsPATLAYR (S) GQS(0.0)FFIDAPDS(0.99)PAT(0.0)LAY(0.0)R s:Phosphorylated S NUBP1 35161.5 1 3 2910.1 66.16 HUMAN 1 -4.6293 0.1677 FFIQDDDSGEELKGH-p O94983-6;S472-p FFIQDDDSGEELKGH 0.2460723690647 0.10045646509765 -0.240666666666667 0.177333333333333 11.6512090383225 13.1879505647297 -0.240666666666667 0.177333333333333 0.0683721278686291 0.0479959888232252 -2.27061717822338 2.54357066208719 O94983 CAMTA2 O94983.6.S472.p_CAMTA2 O94983-6_S472s _1_1_472_472 O94983-6 O94983-6|I3L3W6|O94983-4|O94983-3 Isoform 6 of Calmodulin-binding transcription activator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23230.23230.3 17.36 14.88 99 1 1 1 0 804.7027 2332.1167 S472s TMT10 462 (R) GNCFFIQDDDsGEELK (G) GNCFFIQDDDS(1.0)GEELK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CAMTA2 136109.7 1 1 5142.1 22.46 HUMAN 1 -11.6512 13.188 FFKNMVKSADGVIVS-p Q9UNH7;S194-p FFKNMVKSADGVIVS 0.985606509431769 0.00960237594754087 0.00433333333333333 0.504666666666667 0.127513403694907 28.450809460268 0.00433333333333333 0.504666666666667 0.971065801501036 0.00142862765876477 0.0379795403590526 5.96546155775567 Q9UNH7 SNX6 Q9UNH7.S194.p_SNX6 Q9UNH7_S194s _1_1_194_194 Q9UNH7 A0A0A0MRI2|Q9UNH7|Q9UNH7-2 Sorting nexin-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30317.30317.4 22.45 17.82 19.371 2 1 1 0 715.6044 2779.4303 S194s TMT10 194 (K) sADGVIVSGVKDVDDFFEHER (T) S(0.99)ADGVIVS(0.0)GVKDVDDFFEHER K:TMT10,s:Phosphorylated S SNX6 46933.2 3 2 3564.1 48.1 HUMAN 1 0.1275 28.4508 FFKQHLDSPENNKPP-p Q49AG3;S174-p FFKQHLDSPENNKPP 0.67148953451917 0.00672110602099311 0.0696666666666667 -0.471333333333333 3.23915300393488 31.2000526605823 0.0696666666666667 -0.471333333333333 0.474334484770199 0.000758568376916781 0.768582138126658 -6.7943753240726 Q49AG3 ZBED5 Q49AG3.S174.p_ZBED5 Q49AG3_S174s _1_1_174_174 Q49AG3 Q49AG3 Zinc finger BED domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8481.8481.4 17.43 17.43 8.629 2 1 1 0 618.0834 2389.3443 S174s TMT10 170 (K) QHLDsPENNKPPTPK (I) QHLDS(0.99)PENNKPPT(0.0)PK K:TMT10,s:Phosphorylated S ZBED5 80050.6 2 1 5656.1 17.43 HUMAN 1 3.2392 -31.2001 FFKQIDSSPVGGETD-p J3KNL6;S569-p FFKQIDSSPVGGETD 0.609020543701224 0.990324797150279 -0.074 -0.00133333333333332 3.98739565155569 0.0631478932671446 -0.074 -0.00133333333333331 0.399264258738881 0.985564860471573 -0.914719516209208 -0.0189420383504208 J3KNL6 SEC16A J3KNL6.S569.p_SEC16A J3KNL6_S569s _1_1_569_569 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13022.13022.2 19.45 19.45 1.123 7 1 1 0 1296.5873 2512.2001 S569s TMT10 565 (K) QIDSsPVGGETDETTVSQNYR (G) QIDS(0.0)S(0.99)PVGGET(0.0)DET(0.0)T(0.0)VS(0.0)QNY(0.0)R s:Phosphorylated S SEC16A 253486.5 1 15 15.1 1143.82 HUMAN 1 -3.9874 -0.0631 FFKSVVKSADEVLFT-p Q9Y5X3;S193-p FFKSVVKSADEVLFT 0.227780752069412 0.00494938312222238 -0.706333333333333 0.880666666666667 12.3540701021536 33.6231445787671 -0.706333333333333 0.880666666666667 0.0581557940356989 0.000434195723956414 -2.39529882247598 7.60083692014987 Q9Y5X3 SNX5 Q9Y5X3.S193.p_SNX5 Q9Y5X3_S193s _1_1_193_193 Q9Y5X3 Q9Y5X3 Sorting nexin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24183.24183.3 12.72 12.17 12.716 2 1 1 0 568.6398 1623.9358 S193s TMT10 193 (K) sADEVLFTGVK (E) S(0.99)ADEVLFT(0.0)GVK K:TMT10,s:Phosphorylated S SNX5 47100.9 1 2 2397.1 85.28 HUMAN 1 -12.3541 33.6231 FFLSQQASLLKNDET-p Q9UJX4;S221-p FFLSQQASLLKNDET 0.2592179584854 0.406816730650782 0.200333333333333 0.093 11.1398360345251 5.19898290664571 0.200333333333333 0.093 0.0769159478928324 0.302065905900606 2.18062572210055 1.14016258958786 Q9UJX4 ANAPC5 Q9UJX4.S221.p_ANAPC5 Q9UJX4_S221s _1_1_221_221 Q9UJX4 Q9UJX4|F5H0F9|Q9UJX4-3|Q9UJX4-2 Anaphase-promoting complex subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26666.26666.4 19.51 19.51 2.883 3 1 1 0 741.8981 2884.6023 S221s TMT10 211 (K) QAEFFLSQQAsLLKNDETK (A) QAEFFLS(0.0)QQAS(0.99)LLKNDET(0.0)K K:TMT10,s:Phosphorylated S ANAPC5 85760.1 5 2 3031.1 62.7 HUMAN 1 11.1398 5.199 FFNIDQISPNKKAHP-p P49662;S83-p FFNIDQISPNKKAHP 0.259411432378501 0.00107456139719538 -0.186333333333333 -1.22166666666667 11.127585071974 50.1890274200536 -0.186333333333333 -1.22166666666667 0.0771332255099277 9.57408453942009e-06 -2.17847637169218 -15.8210775611869 P49662 CASP4 P49662.S83.p_CASP4 P49662_S83s _1_1_83_83 P49662 P49662|P49662-2|P49662-4|P49662-5|P49662-3 Caspase-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36489.36489.4 19.73 18.47 3.791 2 1 1 0 798.6786 3111.7302 S83s TMT10 67 (R) MAGQMLLQTFFNIDQIsPNKK (A) MAGQMLLQT(0.0)FFNIDQIS(0.99)PNKK K:TMT10,s:Phosphorylated S CASP4 43832 4 1 3801.1 42.86 HUMAN 1 -11.1276 -50.189 FFNPVCATPNSKILK-p O95239;T1161-p FFNPVCATPNSKILK 0.17801215785102 0.51900528800353 0.272333333333333 -0.121 14.8207652040429 3.82647387841347 0.272333333333333 -0.121 0.0329551641795184 0.41433594572274 2.84490264610239 -0.883666186078272 O95239 KIF4A O95239.T1161.p_KIF4A O95239_T1161t _1_1_1161_1161 O95239 O95239 Chromosome-associated kinesin KIF4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30868.30868.4 13.62 13.6 1.631 8 1 1 0 1092.5403 4287.1734 T1161t TMT10 1133 (R) TQDSEGSFKLEDPTEVTPGLSFFNPVCAtPNSK (I) T(0.0)QDS(0.0)EGS(0.0)FKLEDPT(0.0)EVT(0.0)PGLS(0.0)FFNPVCAT(0.99)PNS(0.0)K K:TMT10,C:Carbamidomethylation,t:Phosphorylated T KIF4A 141476.1 1 13 516.1 285.41 HUMAN 1 14.8208 -3.8265 FFQELPGSDPVFKAV-p Q6P996;S401-p FFQELPGSDPVFKAV 0.301224036518654 0.388069332338872 -0.179 -0.122 9.78294270349255 5.46461786345871 -0.179 -0.122 0.105124932427916 0.28414381926714 -1.9440236778121 -1.18830204330706 Q6P996 PDXDC1 Q6P996.S401.p_PDXDC1 Q6P996_S401s _1_1_401_401 Q6P996 H3BND4|Q6P996|Q6P996-5|Q6P996-4|Q6P996-3|Q86XE2 Pyridoxal-dependent decarboxylase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31164.31164.3 12.39 10.69 99 1 1 1 0 683.689 1969.0835 S401s TMT10 394 (R) FFQELPGsDPVFK (A) FFQELPGS(1.0)DPVFK K:TMT10,s:Phosphorylated S PDXDC1 87618.2 1 5 600.1 263.32 HUMAN 1 -9.7829 -5.4646 FFQPPPLTPTSKVYT-p O60502;T709-p FFQPPPLTPTSKVYT 0.0519571788354811 0.00273435035772849 -0.518666666666667 -0.709666666666667 28.0122697659351 38.8965162674274 -0.518666666666667 -0.709666666666667 0.00158042184290682 0.000128928334733296 -5.84942061739766 -9.64593852818631 O60502 MGEA5 O60502.T709.p_MGEA5 O60502_T709t _1_1_709_709 O60502 O60502|O60502-4 Protein O-GlcNAcase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36776.36776.3 25.93 25.93 2 3 1 1 0 973.8598 2839.601 T709t TMT10 692 (R) LLPIDGANDLFFQPPPLtPTSK (V) LLPIDGANDLFFQPPPLT(0.99)PT(0.0)S(0.0)K K:TMT10,t:Phosphorylated T MGEA5 103997.3 4 4 1909.1 107.89 HUMAN 1 -28.0123 -38.8965 FFQRTGLSPLKFKAQ-p P0C7P0;S83-p FFQRTGLSPLKFKAQ 0.64009150118223 0.0541749804968218 -0.0666666666666667 0.239333333333333 3.61934157791872 16.8780010260093 -0.0666666666666667 0.239333333333333 0.434576104081611 0.0205210650664644 -0.843629135538855 3.23620065853368 P0C7P0 CISD3 P0C7P0.S83.p_CISD3 P0C7P0_S83s _1_1_83_83 P0C7P0 P0C7P0 CDGSH iron-sulfur domain-containing protein 3, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16949.16949.2 9.32 1.97 3.921 2 1 1 0 627.3683 1173.7607 S83s TMT10 80 (R) TGLsPLK (F) T(0.0)GLS(0.99)PLK K:TMT10,s:Phosphorylated S CISD3 14557.6 1 1 6816.1 9.32 HUMAN 1 -3.6193 16.878 FFRQRMFSPMEEKEL-p Q9UHB7;S694-p FFRQRMFSPMEEKEL 0.263812127853958 0.195103961786118 -0.221333333333333 0.160666666666667 10.9825953982775 9.3313374703932 -0.221333333333333 0.160666666666667 0.0797517938107109 0.116645033710074 -2.15306047878219 1.86503746808228 Q9UHB7 AFF4 Q9UHB7.S694.p_AFF4 Q9UHB7_S694s _1_1_694_694 Q9UHB7 Q9UHB7|Q9UHB7-2 AF4/FMR2 family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20332.20332.2 11.22 11.22 99 1 1 1 0 768.8666 1456.758 S694s TMT10 692 (R) MFsPMEEK (E) MFS(1.0)PMEEK K:TMT10,s:Phosphorylated S AFF4 127856.3 10 15 137.1 525.98 HUMAN 1 -10.9826 9.3313 FFSFFQRSKKKRDQT-p Q53SF7;S285-p FFSFFQRSKKKRDQT 0.373195143267854 0.726507044659559 0.141 -0.231666666666667 7.93916913934487 1.90898844471653 0.141 -0.231666666666667 0.160724871074975 0.644319322387554 1.6246062718701 -0.488495415898356 Q53SF7 COBLL1 Q53SF7.S285.p_COBLL1 Q53SF7_S285s _1_1_285_285 Q53SF7 Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4|A0A0B4J1Z0 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27489.27489.3 11.35 11.35 11.346 2 1 1 0 596.9802 1708.9575 S285s TMT10 277 (K) GFFSFFQRsK (K) GFFS(0.0)FFQRS(0.99)K K:TMT10,s:Phosphorylated S COBLL1 132526.1 1 5 163.1 494.83 HUMAN 1 7.9392 -1.909 FGDFLQHSPSILQSK-p Q96Q89-2;S1773-p FGDFLQHSPSILQSK 0.877102803799026 0.00138078039709077 0.0243333333333333 -1.184 1.11874979406513 46.3810276573483 0.0243333333333333 -1.184 0.772903049103361 2.30089729890927e-05 0.303405928207199 -13.4106346068488 Q96Q89 KIF20B Q96Q89.2.S1773.p_KIF20B Q96Q89-2_S1773s _1_1_1773_1773 Q96Q89-2 Q96Q89-2|Q96Q89-3|Q96Q89-5 Isoform 2 of Kinesin-like protein KIF20B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25647.25647.3 16.93 16.93 2.802 3 1 1 0 748.0611 2162.201 S1773s TMT10 1766 (K) FGDFLQHsPSILQSK (A) FGDFLQHS(0.99)PS(0.0)ILQS(0.0)K K:TMT10,s:Phosphorylated S KIF20B 215641.1 5 15 486.1 295.59 HUMAN 1 1.1187 -46.381 FGDKDTKSKVTLLEG-p O75534;S306-p FGDKDTKSKVTLLEG 0.335207264177984 0.601950601922318 0.133 -0.0546666666666666 8.85129617565842 2.98887217375666 0.133 -0.0546666666666666 0.130277789922702 0.502473060608343 1.78262185232572 -0.718050637906321 O75534 CSDE1 O75534.S306.p_CSDE1 O75534_S306sT309t_2_2_306_309 O75534 O75534-4|O75534-3|O75534-2|E9PLT0 Cold shock domain-containing protein E1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26156.26156.4 8.86 1.19 7.99 4 2 2 0 702.1028 2645.4775 S306s T309t TMT10 306 (K) sKVtLLEGDHVRFNISTDR (R) S(0.99)KVT(0.99)LLEGDHVRFNIS(0.0)T(0.0)DR K:TMT10,s:Phosphorylated S,t:Phosphorylated T CSDE1 89738.9 2 12 1077.1 180.35 HUMAN 1 8.8513 -2.9889 FGDMEDLTDEEEVPA-p Q7L590;T85-p FGDMEDLTDEEEVPA 0.795842244766724 0.219378532912972 -0.051 -0.144666666666667 1.91686157952982 8.67259808134818 -0.051 -0.144666666666667 0.643152322175457 0.135750110528236 -0.490310696166049 -1.75108382735204 Q7L590 MCM10 Q7L590.T85.p_MCM10 Q7L590_T85t _1_1_85_85 Q7L590 Q7L590|Q7L590-2|Q5T670 Protein MCM10 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32069.32069.3 26.41 22.43 8.417 5 1 1 0 1150.5093 3369.5478 T85t TMT10 72 (K) ENLATLFGDMEDLtDEEEVPASQSTENR (V) ENLAT(0.0)LFGDMEDLT(0.99)DEEEVPAS(0.0)QS(0.0)T(0.0)ENR t:Phosphorylated T MCM10 99322.4 5 2 1720.1 119.54 HUMAN 1 -1.9169 -8.6726 FGEEGPPSLEYIQAK-p J3KT95;S22-p FGEEGPPSLEYIQAK 0.276322361958096 0.0062156175360252 -0.232333333333333 -1.25233333333333 10.5611002322206 31.7935087398728 -0.232333333333333 -1.25233333333333 0.0878799855378548 0.000661681703656101 -2.07938408111168 -6.9849620836143 J3KT95 NotFound J3KT95.S22.p_NotFound J3KT95_S22s _1_1_22_22 J3KT95 J3KT95 Myotubularin-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29702.29702.4 21.07 21.07 3.738 5 1 1 0 782.6223 3047.4928 S22s TMT10 7 (R) VSCSMLSCFGEEGPPsLEYIQAK (D) VS(0.0)CS(0.0)MLS(0.0)CFGEEGPPS(0.99)LEY(0.0)IQAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTMR4 12773.6 1 1 5273.1 21.07 HUMAN 1 -10.5611 -31.7935 FGENRLRSTQAATQV-p O75439;S44-p FGENRLRSTQAATQV 0.377007280567508 0.201800181622763 0.137333333333333 0.132666666666667 7.8296986684755 9.14476094785453 0.137333333333333 0.132666666666667 0.164827675183556 0.121765401529337 1.60560333656025 1.832753769095 O75439 PMPCB O75439.S44.p_PMPCB O75439_S44s _1_1_44_44 O75439 G3V0E4|O75439|F8WAZ6|F8WBE1|F8WEA6 Mitochondrial-processing peptidase subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18599.18599.2 16.94 16.94 2.214 4 1 1 0 1012.0242 1943.0759 S44s TMT10 44 (R) sTQAATQVVLNVPETR (V) S(0.99)T(0.0)QAAT(0.0)QVVLNVPET(0.0)R s:Phosphorylated S PMPCB 55106.9 2 1 5427.1 19.43 HUMAN 1 7.8297 9.1448 FGESPPLSPIDMDTQ-p P17535;S259-p FGESPPLSPIDMDTQ 0.0866557243462627 0.00369748508651921 -0.375333333333333 -0.595666666666667 22.6912471748177 36.097963794171 -0.375333333333333 -0.595666666666667 0.00538115228368536 0.000245586008493265 -4.48181541100205 -8.50733090813461 P17535 JUND P17535.S259.p_JUND P17535_S259s _1_1_259_259 P17535 P17535 Transcription factor jun-D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29551.29551.4 24.33 24.33 1.939 5 1 1 0 1030.2654 4038.0782 S259s TMT10 236 (R) LAALKDEPQTVPDVPSFGESPPLsPIDMDTQER (I) LAALKDEPQT(0.0)VPDVPS(0.0)FGES(0.0)PPLS(0.99)PIDMDT(0.0)QER K:TMT10,s:Phosphorylated S JUND 35287.4 4 8 1749.1 117.66 HUMAN 1 -22.6912 -36.098 FGESSTESDEEEEEG-p O60927;S77-p FGESSTESDEEEEEG 0.39120743112417 0.0092292356544658 0.139333333333333 0.535666666666667 7.5147810940799 28.7523728106043 0.139333333333333 0.535666666666667 0.177223737242146 0.00133279304861475 1.55085549713594 6.05225828252295 O60927 PPP1R11 O60927.S77.p_PPP1R11 O60927_S77s _1_1_77_77 O60927 O60927|Q5SRK2 Protein phosphatase 1 regulatory subunit 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7362.7362.3 26.85 26.85 2.3 5 1 1 0 1016.7333 2968.2159 S77s TMT10 69 (R) AFGESSTEsDEEEEEGCGHTHCVR (G) AFGES(0.0)S(0.0)T(0.0)ES(0.99)DEEEEEGCGHT(0.0)HCVR C:Carbamidomethylation,s:Phosphorylated S PPP1R11 14237.5 2 2 2904.1 66.4 HUMAN 1 7.5148 28.7524 FGEVVDCTLKLDPIT-p Q14103;T127-p FGEVVDCTLKLDPIT 0.301887758255495 0.0194744971299651 -0.321 1.10633333333333 9.74895159045549 23.4881970242531 -0.321 1.10633333333333 0.105950946542191 0.00447899211168956 -1.93812591046328 4.66542513183038 Q14103 HNRNPD Q14103.T127.p_HNRNPD Q14103_T127t _1_1_127_127 Q14103 Q14103|Q14103-2|Q14103-3|Q14103-4 Heterogeneous nuclear ribonucleoprotein D0 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25897.25897.3 11.27 5.97 9.728 2 1 1 0 820.0974 2378.3154 T127t TMT10 120 (K) FGEVVDCtLKLDPITGR (S) FGEVVDCT(0.99)LKLDPIT(0.0)GR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T HNRNPD 38604.6 1 3 1392.1 147 HUMAN 1 -9.749 23.4882 FGEVWMGTWNGTTKV-p J3QRU1;T300-p FGEVWMGTWNGTTKV 0.56180416027387 0.571841623065093 0.099 0.0553333333333333 4.60852966160629 3.27185191459553 0.099 0.0553333333333333 0.346056518172921 0.470776535485663 1.03180436110337 0.774993175821658 J3QRU1 NotFound J3QRU1.T300.p_NotFound J3QRU1_T300t _1_1_300_300 J3QRU1 J3QRU1|P07947 Tyrosine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.29586.29586.3 16.39 16.39 5.083 3 1 1 0 889.7553 2587.2838 T300t TMT10 288 (K) LGQGCFGEVWMGtWNGTTK (V) LGQGCFGEVWMGT(0.99)WNGT(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T YES1 61899.4 1 6 1289.1 157.77 HUMAN 1 4.6085 3.2719 FGFCAQITPEQSKRS-p Q13177;T394-p FGFCAQITPEQSKRS 0.90552186362789 0.283072267160163 -0.026 0.130666666666667 0.848506866980966 7.22660376660159 -0.026 0.130666666666667 0.822525390984398 0.189382403215564 -0.235434016710704 1.50019560268899 Q13177 PAK2 Q13177.T394.p_PAK2 Q13177_T394t _1_1_394_394 Q13177 O75914-3|O75914-4|Q13153-2|O75914-2|A0A087X294|Q13177|B3KNX7|E9PM17 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23262.23262.3 18.05 14.38 4.319 3 1 1 0 846.0941 2456.3008 T394t TMT10 384 (K) LTDFGFCAQItPEQSKR (S) LT(0.0)DFGFCAQIT(0.99)PEQS(0.0)KR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T PAK2 58326.8 3 32 272.1 393.22 HUMAN 1 -0.8485 7.2266 FGFIDSDTDAEEERI-p Q14676;T331-p FGFIDSDTDAEEERI 0.472242774125495 0.4369736199892 0.0963333333333333 0.076 6.00944130954184 4.78970017825047 0.0963333333333334 0.076 0.25064316677641 0.331917371178279 1.28624531394513 1.06516712529147 Q14676 MDC1 Q14676.T331.p_MDC1 Q14676_S329sT331t_2_2_329_331 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30706.31312.5 25.19 25.19 6.889 3 2 2 0 810.6131 3889.1024 S329s T331t TMT10 321 (R) AQPFGFIDsDtDAEEERIPATPVVIPMKK (R) AQPFGFIDS(0.99)DT(0.99)DAEEERIPAT(0.0)PVVIPMKK K:TMT10,s:Phosphorylated S,t:Phosphorylated T MDC1 227803.2 36 59 6.1 1662.62 HUMAN 1 6.0094 4.7897 FGFTIADSPGGGGQR-p Q96QZ7;S660-p FGFTIADSPGGGGQR 0.89100765848779 0.207319092259688 -0.038 0.164666666666667 0.979094703217438 8.98822388477927 -0.038 0.164666666666667 0.798161048424631 0.126234368423634 -0.268626301913499 1.80567567442381 Q96QZ7 MAGI1 Q96QZ7.S660.p_MAGI1 Q96QZ7_S660s _1_1_660_660 Q96QZ7 Q96QZ7|Q96QZ7-2|Q96QZ7-6|Q96QZ7-7|Q96QZ7-5|Q96QZ7-3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.26265.26265.3 10.64 10.64 1.339 2 1 1 0 706.6613 2038.0014 S660s TMT10 649 (K) GPMGFGFTIADsPGGGGQR (V) GPMGFGFT(0.0)IADS(0.99)PGGGGQR s:Phosphorylated S MAGI1 165548 1 3 1223.1 164.72 HUMAN 1 -0.9791 8.9882 FGFVDFNSEEDAKAA-p P19338;S619-p FGFVDFNSEEDAKAA 0.810035198209422 0.154246507870554 -0.035 0.151 1.7569183091512 10.6762505200533 -0.035 0.151 0.667280093567874 0.0855805253206636 -0.454270593727839 2.0985689462044 P19338 NCL P19338.S619.p_NCL P19338_S619s _1_1_619_619 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26477.26477.2 18.43 18.43 99 1 1 1 0 1050.4886 2020.0064 S619s TMT10 611 (K) GFGFVDFNsEEDAK (A) GFGFVDFNS(1.0)EEDAK K:TMT10,s:Phosphorylated S NCL 76670.1 3 22 114.1 570.88 HUMAN 1 -1.7569 10.6763 FGGEPHHSPGPMPAG-p Q8WUU4;S69-p FGGEPHHSPGPMPAG 0.958739785397171 0.0599226547177387 -0.00933333333333334 -0.344 0.354937388928642 16.2863295927057 -0.00933333333333334 -0.344 0.921523173991783 0.0235161943480076 -0.103197219577195 -3.1211089550421 Q8WUU4 ZNF296 Q8WUU4.S69.p_ZNF296 Q8WUU4_S69s _1_1_69_69 Q8WUU4 Q8WUU4|Q8IX33 Zinc finger protein 296 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23222.23222.4 27.39 27.39 99 1 1 1 0 662.3374 2566.355 S69s TMT10 62 (R) FGGEPHHsPGPMPAGAALLALGPR (N) FGGEPHHS(1.0)PGPMPAGAALLALGPR s:Phosphorylated S ZNF296 51836.4 1 2 3351.1 53.13 HUMAN 1 -0.3549 -16.2863 FGGLGGGSVRFGPGV-p P08727;S22-p FGGLGGGSVRFGPGV 0.269424134699647 0.265708713275821 0.268333333333333 0.151666666666667 10.7953049900563 7.57892765807206 0.268333333333333 0.151666666666667 0.0832663448845867 0.174625327731148 2.12028585530586 1.56155050651348 P08727 KRT19 P08727.S22.p_KRT19 P08727_S22s _1_1_22_22 P08727 P08727 Keratin, type I cytoskeletal 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13304.13910.2 19.26 13.92 5.562 6 1 1 0 932.4426 1783.9136 S22s TMT10 8 (R) QSSATSSFGGLGGGsVR (F) QS(0.0)S(0.0)AT(0.0)S(0.0)S(0.0)FGGLGGGS(0.99)VR s:Phosphorylated S KRT19 44105.2 5 5 383.1 334.07 HUMAN 1 10.7953 7.5789 FGGRSSGSPYGGGYG-p P51991;S358-p FGGRSSGSPYGGGYG 0.523924502427807 0.108376728828655 0.0856666666666667 0.254 5.19350819433102 12.7494940557069 0.0856666666666667 0.254 0.302446930017517 0.0530946294798336 1.13940414823388 2.46470231701867 P51991 HNRNPA3 P51991.S358.p_HNRNPA3 P51991_S358s _1_1_358_358 P51991 P51991|P51991-2 Heterogeneous nuclear ribonucleoprotein A3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7595.7595.2 19.48 15.2 2.256 9 1 1 0 1110.4632 2139.9529 S358s TMT10 355 (R) SSGsPYGGGYGSGGGSGGYGSR (R) S(0.0)S(0.0)GS(0.99)PY(0.0)GGGY(0.0)GS(0.0)GGGS(0.0)GGY(0.0)GS(0.0)R s:Phosphorylated S HNRNPA3 39822.5 16 4 2139.1 96.03 HUMAN 1 5.1935 12.7495 FGGTVYHSPVSRLPP-p O43663;S513-p FGGTVYHSPVSRLPP 0.161340755475352 0.0120890783164035 0.374666666666667 -0.544 15.8593926921949 26.7841479605324 0.374666666666667 -0.544 0.0259454215179265 0.00209693613645054 3.04123851860324 -5.50279203595313 O43663 PRC1 O43663.S513.p_PRC1 O43663_S513s _1_1_513_513 O43663 O43663|O43663-4 Protein regulator of cytokinesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18253.18253.5 26.57 26.57 2.885 11 1 1 0 770.0019 3766.011 S513s TMT10 487 (R) KLNTTTMSNATANSSIRPIFGGTVYHsPVSR (L) KLNT(0.0)T(0.0)T(0.0)MS(0.0)NAT(0.0)ANS(0.0)S(0.0)IRPIFGGT(0.0)VY(0.0)HS(0.99)PVS(0.0)R K:TMT10,s:Phosphorylated S PRC1 72290 2 6 715.1 238.03 HUMAN 1 15.8594 -26.7841 FGHLEFLSGEKKNKK-p Q1ED39;S111-p FGHLEFLSGEKKNKK 0.21671898036419 0.00133038413689346 -0.293 -1.05633333333333 12.7991106702902 46.8138333170998 -0.293 -1.05633333333333 0.052491493908642 2.08265181088076e-05 -2.47492997432998 -13.6658080568685 Q1ED39 KNOP1 Q1ED39.S111.p_KNOP1 Q1ED39_S111s _1_1_111_111 Q1ED39 Q1ED39 Lysine-rich nucleolar protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24961.24961.3 18.96 11.22 99 1 1 1 0 677.0252 1949.0897 S111s TMT10 102 (K) QVFGHLEFLsGEK (K) QVFGHLEFLS(1.0)GEK K:TMT10,s:Phosphorylated S KNOP1 51759.2 2 4 660.1 251.7 HUMAN 1 -12.7991 -46.8138 FGHTLVASLEDMKQK-p P11137;S233-p FGHTLVASLEDMKQK 0.283283360364086 0.00988475424532347 -0.166666666666667 0.440666666666667 10.3452984905053 28.2015809615546 -0.166666666666667 0.440666666666667 0.0923570709242931 0.00151301036723541 -2.04176968456354 5.8944578965713 P11137 MAP2 P11137.S233.p_MAP2 P11137_S233s _1_1_233_233 P11137 P11137|P11137-3 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.34407.34407.3 19.3 19.3 4.794 2 1 1 0 817.775 2371.346 S233s TMT10 221 (K) APLALFGHTLVAsLEDMK (Q) APLALFGHT(0.0)LVAS(0.99)LEDMK K:TMT10,s:Phosphorylated S MAP2 199979.2 1 2 117.1 560.28 HUMAN 1 -10.3453 28.2016 FGIRRQNSVNSGMLL-p H3BMS5;S1245-p FGIRRQNSVNSGMLL 0.362926296935609 0.0164831854405955 -0.141333333333333 -0.459333333333333 8.1773173061995 24.6229928380834 -0.141333333333333 -0.459333333333333 0.152148708198037 0.00344905973595714 -1.66590717276384 -4.94287341126314 H3BMS5 NotFound H3BMS5.S1245.p_NotFound H3BMS5_S1245s _1_1_1245_1245 H3BMS5 H3BMS5|Q6ZVD8|Q6ZVD8-3 PH domain leucine-rich repeat-containing protein phosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23506.23506.3 17.19 11.84 2.113 3 1 1 0 682.0175 1964.0709 S1245s TMT10 1243 (R) QNsVNSGMLLPMSK (D) QNS(0.99)VNS(0.0)GMLLPMS(0.0)K K:TMT10,s:Phosphorylated S PHLPP2 152671.8 5 4 2145.1 95.86 HUMAN 1 -8.1773 -24.623 FGISTPGSDLHVNAK-p Q09666;S5418-p FGISTPGSDLHVNAK 0.683488788294502 0.411254989786089 -0.0603333333333333 -0.0976666666666666 3.09908154804824 5.13334984845004 -0.0603333333333333 -0.0976666666666666 0.489882409421024 0.306665566897796 -0.740466020627668 -1.12820672413895 Q09666 AHNAK Q09666.S5418.p_AHNAK Q09666_S5418s _1_1_5418_5418 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24071.24071.4 19.47 19.47 1.362 3 1 1 0 727.6496 2827.6107 S5418s TMT10 5406 (K) MKLPQFGISTPGsDLHVNAK (G) MKLPQFGIS(0.0)T(0.0)PGS(0.99)DLHVNAK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 138 1.1 4313.36 HUMAN 1 -3.0991 -5.1333 FGKSLCGSPEEEEKQ-p O14513;S630-p FGKSLCGSPEEEEKQ 0.853079951921363 0.0910630018690853 -0.0333333333333333 -0.205333333333333 1.33662023214747 13.7639802599947 -0.0333333333333333 -0.205333333333333 0.735085704243824 0.0420341213810887 -0.356307677990057 -2.64813004320685 O14513 NCKAP5 O14513.S630.p_NCKAP5 O14513_S630s _1_1_630_630 O14513 O14513|A0A0A0MS79 Nck-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10613.10613.2 8.89 8.89 3.533 2 1 1 0 901.9195 1722.862 S630s TMT10 626 (K) SLCGsPEEEEK (Q) S(0.0)LCGS(0.99)PEEEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NCKAP5 210359.1 1 3 4560.1 29.87 HUMAN 1 -1.3366 -13.764 FGKYCRLSPRNALSV-p P31629;S433-p FGKYCRLSPRNALSV 0.0675927151943729 0.0113693773583896 -0.547666666666667 -0.539 25.2473557308989 27.2163809177623 -0.547666666666667 -0.539 0.00298720086876228 0.00189828715143615 -5.10669841555414 -5.62008213542737 P31629 HIVEP2 P31629.S433.p_HIVEP2 P31629_S433s _1_1_433_433 P31629 P31629 Transcription factor HIVEP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5968.5968.3 10.7 6.03 7.455 2 1 1 0 420.8755 1180.6458 S433s TMT10 429 (K) YCRLsPR (N) Y(0.0)CRLS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S HIVEP2 271273.5 1 3 465.2 303.46 HUMAN 1 -25.2474 -27.2164 FGLSNMMSDGEFLRT-p Q13131-2;S191-p FGLSNMMSDGEFLRT 0.771836735607401 0.107098583239332 0.0403333333333333 0.184 2.15357425282124 12.817927263868 0.0403333333333333 0.184 0.609035453450531 0.0522645569990866 0.542549809151979 2.47697325394707 Q13131 PRKAA1 Q13131.2.S191.p_PRKAA1 Q13131-2_S191s_1_1_191_191 Q13131-2 Q13131-2|P54646|A0A087WXX9|Q96E92 Isoform 2 of 5'-AMP-activated protein kinase catalytic subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.34847.34847.3 13.46 13.46 1.183 2 1 1 0 738.3401 2132.0354 N188n S191s TMT10 181 (K) IADFGLSnMMsDGEFLR (T) IADFGLS(0.0)N(1.0)MMS(0.99)DGEFLR n:Deamidated,s:Phosphorylated S PRKAA1 66149.4 20 5 1453.1 140.73 HUMAN 1 2.1536 12.8179 FGMSRNLYAGDYYRV-p Q08345-5;Y798-p FGMSRNLYAGDYYRV 0.862056719598785 0.0569696457096895 0.0326666666666666 0.261333333333333 1.25928490407492 16.5801600811785 0.0326666666666667 0.261333333333333 0.748292701940735 0.0219777886104533 0.337709736504779 3.17804778655295 Q08345 DDR1 Q08345.5.Y798.p_DDR1 Q08345-5_Y798y _1_1_798_798 Q08345-5 Q08345-5 Isoform 4 of Epithelial discoidin domain-containing receptor 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.15075.15155.2 17.45 12.1 5.552 3 1 1 0 722.3287 1363.6844 Y798y TMT10 796 (R) NLyAGDYYR (V) NLY(0.99)AGDY(0.0)Y(0.0)R y:Phosphorylated Y DDR1 102764.5 2 1 207.1 17.45 HUMAN 1 1.2593 16.5802 FGNHIEGSPERDPSP-p A8K855;S200-p FGNHIEGSPERDPSP 0.67148953451917 0.0348316649817464 0.154 0.403666666666667 3.23940728671377 19.6294807399417 0.154 0.403666666666667 0.474306712932206 0.01089060298006 0.768632938747983 3.79641154331655 A8K855 EFCAB7 A8K855.S200.p_EFCAB7 A8K855_S200s _1_1_200_200 A8K855 A8K855|A8K855-2 EF-hand calcium-binding domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10377.10377.5 19.71 19.71 5.631 3 1 1 0 681.7579 3324.8056 S200s TMT10 191 (R) HQFGNHIEGsPERDPSPVPKPSPK (I) HQFGNHIEGS(0.99)PERDPS(0.0)PVPKPS(0.0)PK K:TMT10,s:Phosphorylated S EFCAB7 73064 1 2 3826.1 42.29 HUMAN 1 3.2394 19.6295 FGNVEPASLPSASVF-p P49790-3;S1122-p FGNVEPASLPSASVF 0.523162183518031 0.286440651958966 0.1 0.137 5.20359008080175 7.16336006406486 0.1 0.137 0.301745631896781 0.192160444029237 1.14123955015695 1.48915823202079 P49790 NUP153 P49790.3.S1122.p_NUP153 P49790-3_S1122s _1_1_1122_1122 P49790-3 P49790-3 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35488.35488.3 15.88 13.09 4.243 4 1 1 0 868.7744 2524.3397 S1122s TMT10 1111 (K) GGFSFGNVEPAsLPSASVFVLGR (T) GGFS(0.0)FGNVEPAS(0.99)LPS(0.0)AS(0.0)VFVLGR s:Phosphorylated S NUP153 158989.2 1 38 64.1 696.53 HUMAN 1 5.2036 7.1634 FGPGVERSGLKANEP-p O75369-8;S755-p FGPGVERSGLKANEP 0.037433821034406 0.0342221059808752 -0.636666666666667 0.385 32.5597017584809 19.7473929982345 -0.636666666666667 0.385 0.000554663801881861 0.0105988976948551 -7.2503380677585 3.82142833520288 O75369 FLNB O75369.8.S755.p_FLNB O75369-8_S755s _1_1_755_755 O75369-8 O75369-8|E7EN95|O75369-4|O75369-5 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16464.16464.3 11.19 11.19 99 1 1 1 0 595.335 1704.0209 S755s TMT10 747 (K) VFGPGVERsGLK (A) VFGPGVERS(1.0)GLK K:TMT10,s:Phosphorylated S FLNB 283797.6 1 12 67.1 680.07 HUMAN 1 -32.5597 19.7474 FGPLAQLSPQERLSR-p P51692;S193-p FGPLAQLSPQERLSR 0.640830654144085 0.225831090687208 0.0736666666666667 0.129666666666667 3.60900912525023 8.51092391843761 0.0736666666666667 0.129666666666667 0.435611250253735 0.140898901809589 0.84161236810929 1.72311475656237 P51692 STAT5B P51692.S193.p_STAT5B P51692_S193s _1_1_193_193 P51692 P51692 Signal transducer and activator of transcription 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25181.25181.3 16.06 16.06 99 1 1 1 0 698.0324 2012.1126 S193s TMT10 182 (R) IQAQFGPLAQLsPQER (L) IQAQFGPLAQLS(1.0)PQER s:Phosphorylated S STAT5B 90377.7 1 2 4456.1 31.13 HUMAN 1 3.609 8.5109 FGPLSSRSAPASPTH-p P85037;S416-p FGPLSSRSAPASPTH 0.209938010665401 0.0831217356637679 0.313333333333333 0.238666666666667 13.0842192257996 14.3021904550279 0.313333333333333 0.238666666666667 0.0491561745179015 0.0371347884785279 2.52625391061623 2.74688082740681 P85037 FOXK1 P85037.S416.p_FOXK1 P85037_S416s _1_1_416_416 P85037 P85037|P85037-2 Forkhead box protein K1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9683.9683.3 15.74 15.74 2.119 4 1 1 0 605.6318 1734.9159 S416s TMT10 416 (R) sAPASPTHPGLMSPR (S) S(0.99)APAS(0.0)PT(0.0)HPGLMS(0.0)PR s:Phosphorylated S FOXK1 75912.4 2 8 686.1 243.66 HUMAN 1 13.0842 14.3022 FGQDEDVTSKAFTGR-p P16615;T648-p FGQDEDVTSKAFTGR 0.529276501737613 0.252175381522518 0.086 0.119333333333333 5.1126019467899 7.87861555131236 0.086 0.119333333333333 0.30813413027222 0.162981550420105 1.12465352673227 1.61359308600983 P16615 ATP2A2 P16615.T648.p_ATP2A2 P16615_T648t _1_1_648_648 P16615 P16615 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24677.24677.3 8.66 8.66 1.269 2 1 1 0 649.6696 1867.0213 T648t TMT10 638 (R) IGIFGQDEDVtSK (A) IGIFGQDEDVT(0.99)S(0.0)K K:TMT10,t:Phosphorylated T ATP2A2 116409.4 1 10 1240.1 162.94 HUMAN 1 5.1126 7.8786 FGQQECVSPYRSRGA-p P25054;S1100-p FGQQECVSPYRSRGA 0.94478758147709 0.288215918029848 0.011 -0.162666666666667 0.483414772365325 7.12903891073495 0.011 -0.162666666666667 0.894661034489797 0.193685053957486 0.13875558773741 -1.4831650616656 P25054 APC P25054.S1100.p_APC P25054_S1100s _1_1_1100_1100 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14768.14768.3 19.67 19.67 4.49 2 1 1 0 730.3324 2109.0174 S1100s TMT10 1089 (K) FQPHFGQQECVsPYR (S) FQPHFGQQECVS(0.99)PY(0.0)R C:Carbamidomethylation,s:Phosphorylated S APC 313808.5 3 12 33.1 890.71 HUMAN 1 0.4834 -7.129 FGRGHDLSPLASDIL-p P11137;S725-p FGRGHDLSPLASDIL 0.886118944763575 0.484872286844972 0.0326666666666667 0.0916666666666667 1.02478889013136 4.1978085688486 0.0326666666666667 0.0916666666666667 0.78980724087327 0.380381286653227 0.280084952910939 0.954589419931322 P11137 MAP2 P11137.S725.p_MAP2 P11137_S725s _1_1_725_725 P11137 P11137|P11137-3 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30200.30200.4 20.87 20.87 2.976 9 1 1 0 1043.2537 4090.0215 S725s TMT10 721 (R) GHDLsPLASDILTNTSGSMDEGDDYLPATTPALEK (A) GHDLS(0.99)PLAS(0.0)DILT(0.0)NT(0.0)S(0.0)GS(0.0)MDEGDDY(0.0)LPAT(0.0)T(0.0)PALEK K:TMT10,s:Phosphorylated S MAP2 199979.2 3 5 117.1 560.28 HUMAN 1 1.0248 4.1978 FGRIDRDSYSPRWKG-p Q99590;S961-p FGRIDRDSYSPRWKG 0.594811993936193 0.733675440355045 -0.087 -0.0616666666666666 4.16246770575301 1.85406871709343 -0.087 -0.0616666666666667 0.383489281033813 0.652518949428926 -0.948060815018358 -0.476182531814124 Q99590 SCAF11 Q99590.S961.p_SCAF11 Q99590_S961sS963s_2_2_961_963 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7767.7767.3 7.32 7.32 2.298 3 2 2 0 499.8827 1337.7011 S961s S963s TMT10 957 (R) IDRDsYsPR (W) IDRDS(0.99)Y(0.0)S(0.99)PR s:Phosphorylated S SCAF11 166418 2 34 120.1 549.85 HUMAN 1 -4.1625 -1.8541 FGRNELLSPLKDSDE-p P51826-2;S780-p FGRNELLSPLKDSDE 0.759747032753333 0.294966977106391 -0.0496666666666667 -0.231333333333333 2.2879053167095 6.99921894224959 -0.0496666666666667 -0.231333333333333 0.590485813821853 0.199562118557518 -0.571657170374563 -1.46047304252565 P51826 AFF3 P51826.2.S780.p_AFF3 P51826-2_S780s _1_1_780_780 P51826-2 P51826-2 Isoform 2 of AF4/FMR2 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.35990.35990.4 12.45 12.45 2.15 3 1 1 0 790.9222 3080.7072 S780s TMT10 762 (K) ELEEQFYTLVPFGRNELLsPLK (D) ELEEQFY(0.0)T(0.0)LVPFGRNELLS(0.99)PLK K:TMT10,s:Phosphorylated S AFF3 137490.8 3 2 632.2 256.73 HUMAN 1 -2.2879 -6.9992 FGSFRFPSGNQGGAG-p P55072;S775-p FGSFRFPSGNQGGAG 0.657302725891418 0.859601065691589 0.0623333333333333 -0.018 3.42103823159378 0.92580200318451 0.0623333333333333 -0.018 0.454879302949879 0.808015700644052 0.80470603411053 -0.255136781819114 P55072 VCP P55072.S775.p_VCP P55072_S775s_1_1_775_775 P55072 P55072 Transitional endoplasmic reticulum ATPase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21547.21547.3 11 11 3.767 8 1 1 0 1177.4891 3449.4839 S775s N800n TMT10 773 (R) FPsGNQGGAGPSQGSGGGTGGSVYTEDnDDDLYG (-) FPS(0.99)GN(0.0)QGGAGPS(0.0)QGS(0.0)GGGT(0.0)GGS(0.0)VY(0.0)T(0.0)EDN(0.99)DDDLY(0.0)G s:Phosphorylated S,n:Deamidated VCP 90004.9 6 14 803.1 222.64 HUMAN 1 3.421 -0.9258 FGSGPCKTRDDEPVC-p Q9HDC9;T142-p FGSGPCKTRDDEPVC 0.814399806622497 0.137834895278433 -0.0406666666666667 0.155 1.71033710448582 11.3403991018439 -0.0406666666666667 0.155 0.674475672070887 0.0734446371934563 -0.443653691574176 2.21482100552681 Q9HDC9 APMAP Q9HDC9.T142.p_APMAP Q9HDC9_S137sT142tY169y_3_3_137_169 Q9HDC9 Q9HDC9|Q9HDC9-2 Adipocyte plasma membrane-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.39276.39276.5 7.07 3.07 1.787 4 3 3 0 1176.5656 5636.9502 S137s T142t N160n Y169y N176n Hydrogen 135 (R) FGsGPCKtRDDEPVCGRPLGIRAGPnGTLFVADAyKGLFEVnPWK (R) FGS(0.99)GPCKT(0.99)RDDEPVCGRPLGIRAGPN(1.0)GT(0.0)LFVADAY(0.99)KGLFEVN(1.0)PWK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated,y:Phosphorylated Y APMAP 46650.7 5 4 4467.1 30.97 HUMAN 1 -1.7103 11.3404 FGTAKVLSPESKQAR-p O15530;S231-p FGTAKVLSPESKQAR 0.176075571430546 0.0529773882018352 0.216333333333333 -0.394666666666667 14.9870322299756 17.0148129302147 0.216333333333333 -0.394666666666667 0.0317173414082404 0.0198846846065763 2.87601940960499 -3.26306377720676 O15530 PDPK1 O15530.S231.p_PDPK1 O15530_S231s _1_1_231_231 O15530 O15530|O15530-3|E9PER6|O15530-2|O15530-5|Q6A1A2 3-phosphoinositide-dependent protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13209.13209.2 7.53 7.53 1.634 2 1 1 0 649.3627 1217.7506 S231s TMT10 229 (K) VLsPESK (Q) VLS(0.99)PES(0.0)K K:TMT10,s:Phosphorylated S PDPK1 63664.2 1 3 2897.1 66.6 HUMAN 1 14.987 -17.0148 FGVPGAFTPGCSKTH-p P30044;T97-p FGVPGAFTPGCSKTH 0.472422836600032 0.0408732616119855 0.0953333333333333 0.252 6.00384566898899 18.6113320235545 0.0953333333333333 0.252 0.250966314557939 0.0137678713008203 1.28524863627572 3.58400065299795 P30044 PRDX5 P30044.T97.p_PRDX5 P30044_T97t _1_1_97_97 P30044 P30044|P30044-3|P30044-2 Peroxiredoxin-5, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25217.25217.4 17.76 17.76 4.682 2 1 1 0 623.0974 2409.3931 T97t TMT10 86 (K) KGVLFGVPGAFtPGCSK (T) KGVLFGVPGAFT(0.99)PGCS(0.0)K K:TMT10,C:Carbamidomethylation,t:Phosphorylated T PRDX5 22314.2 2 1 3335.1 53.56 HUMAN 1 6.0038 18.6113 FGYQRRASDDGKLTD-p P04049-2;S43-p FGYQRRASDDGKLTD 0.562530755529578 0.150160072255669 -0.0846666666666667 0.170333333333333 4.6017656710293 10.8364019996135 -0.0846666666666666 0.170333333333333 0.346595909500935 0.0824821171793491 -1.03054636256859 2.12653002922548 P04049 RAF1 P04049.2.S43.p_RAF1 P04049-2_S43s _1_1_43_43 P04049-2 P04049-2|A0A0B4J1W9 Isoform 2 of RAF proto-oncogene serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7840.7840.4 13.19 7.55 1.738 3 1 1 0 540.0438 2077.1856 S43s TMT10 41 (R) RAsDDGKLTDPSK (T) RAS(0.99)DDGKLT(0.0)DPS(0.0)K K:TMT10,s:Phosphorylated S RAF1 76249.7 5 1 441.4 311.96 HUMAN 1 -4.6018 10.8364 FGYVDFESAEDLEKA-p P19338;S356-p FGYVDFESAEDLEKA 0.452568784097785 0.126917418918586 -0.100333333333333 -0.179 6.35235518596192 11.8173128018436 -0.100333333333333 -0.179 0.231613826382268 0.065806488921997 -1.34709877809746 -2.29884576643033 P19338 NCL P19338.S356.p_NCL P19338_S356s _1_1_356_356 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27895.27895.3 14.67 11.31 9.325 2 1 1 0 729.6829 2107.0636 S356s TMT10 349 (K) FGYVDFEsAEDLEK (A) FGY(0.0)VDFES(0.99)AEDLEK K:TMT10,s:Phosphorylated S NCL 76670.1 1 10 114.1 570.88 HUMAN 1 -6.3524 -11.8173 FHAALRNSPVNTKNQ-p Q9BPX5;S64-p FHAALRNSPVNTKNQ 0.390105099545893 0.798731294120568 -0.133333333333333 -0.028 7.56064974243128 1.3647405444012 -0.133333333333333 -0.028 0.175361812564581 0.730341443525904 -1.55883819083519 -0.362985359411642 Q9BPX5 ARPC5L Q9BPX5.S64.p_ARPC5L Q9BPX5_S64s _1_1_64_64 Q9BPX5 Q9BPX5 Actin-related protein 2/3 complex subunit 5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9461.9461.4 11.29 11.29 1.794 2 1 1 0 516.7851 1984.1493 S64s TMT10 56 (R) AFHAALRNsPVNTK (N) AFHAALRNS(0.99)PVNT(0.0)K K:TMT10,s:Phosphorylated S ARPC5L 16940.9 3 1 5339.1 20.34 HUMAN 1 -7.5606 -1.3647 FHGDADGSFGTPPGY-p P11274;S429-p FHGDADGSFGTPPGY 0.787952750145453 0.610344485680758 0.0386666666666667 -0.0683333333333333 1.99650051108309 2.91338472374912 0.0386666666666667 -0.0683333333333333 0.631465966662934 0.511283205804152 0.508026913964643 -0.702667176782776 P11274 BCR P11274.S429.p_BCR P11274_S429sT432t_2_2_429_432 P11274 P11274|P11274-2 Breakpoint cluster region protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18652.18652.5 10.5 10.5 5.937 4 2 2 0 908.5891 4378.9758 S429s T432t TMT10 410 (K) TGQIWPNDGEGAFHGDADGsFGtPPGYGCAADRAEEQRR (H) T(0.0)GQIWPNDGEGAFHGDADGS(0.99)FGT(0.99)PPGY(0.0)GCAADRAEEQRR C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T BCR 143843.8 1 14 642.1 254.93 HUMAN 1 1.9965 -2.9134 FHGVAILSPLLNIEK-p O43303;S45-p FHGVAILSPLLNIEK 0.444478993442275 0.312467152506031 0.102 -0.107 6.48898894091581 6.67747729079003 0.102 -0.107 0.22444043714306 0.214907845814654 1.37123221012399 -1.40406044976608 O43303 CCP110 O43303.S45.p_CCP110 O43303_S45s_1_1_45_45 O43303 O43303|O43303-2 Centriolar coiled-coil protein of 110 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34028.34028.3 13.93 14.65 99 1 1 1 0 730.7562 2109.2836 S45s N49n TMT10 38 (R) FHGVAILsPLLnIEK (R) FHGVAILS(1.0)PLLN(1.0)IEK K:TMT10,s:Phosphorylated S,n:Deamidated CCP110 114220.9 1 2 1000.1 190.08 HUMAN 1 6.489 -6.6775 FHIQRLHSPDGRKSG-p Q9H4Z2;S1127-p FHIQRLHSPDGRKSG 0.0611233751023293 0.120969767436361 0.403 -0.199333333333333 26.491373526334 12.0935589134379 0.403 -0.199333333333333 0.00224317237214866 0.061751016162737 5.43168571122541 -2.34775818044126 Q9H4Z2 ZNF335 Q9H4Z2.S1127.p_ZNF335 Q9H4Z2_S1127s _1_1_1127_1127 Q9H4Z2 Q9H4Z2|Q9H4Z2-2 Zinc finger protein 335 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4244.4244.4 7.49 7.49 99 1 1 1 0 362.7006 1367.816 S1127s TMT10 1125 (R) LHsPDGRK (S) LHS(1.0)PDGRK K:TMT10,s:Phosphorylated S ZNF335 146887.1 3 4 2340.1 87.22 HUMAN 1 26.4914 -12.0936 FHKNDKPSPNSENEQ-p Q15022;S172-p FHKNDKPSPNSENEQ 0.883845724742002 0.321293187451003 -0.0216666666666667 0.163333333333333 1.06028957489216 6.51971131491769 -0.0216666666666667 0.163333333333333 0.783377407704358 0.222858328317324 -0.288933803955081 1.37629609004979 Q15022 SUZ12 Q15022.S172.p_SUZ12 Q15022_S172s _1_1_172_172 Q15022 Q15022|J3QQW9 Polycomb protein SUZ12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27358.27358.5 16.53 11.82 1.103 4 1 1 0 665.1566 3241.7883 S172s TMT10 168 (K) NDKPsPNSENEQNSVTLEVLLVK (V) NDKPS(0.99)PNS(0.0)ENEQNS(0.0)VT(0.0)LEVLLVK K:TMT10,s:Phosphorylated S SUZ12 83795 3 1 1074.1 180.59 HUMAN 1 -1.0603 6.5197 FHNQLRDSQPPAVPD-p E7ETA6;S356-p FHNQLRDSQPPAVPD 0.497489803830562 0.00500305462685801 0.116666666666667 -0.684 5.58525849031301 33.5516459164601 0.116666666666667 -0.684 0.276359342631603 0.0004414031299238 1.21031112053899 -7.57593728325658 E7ETA6 PCM1 E7ETA6.S356.p_PCM1 E7ETA6_S356s _1_1_356_356 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6|Q15154-3|E9PGW9 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7479.7479.4 15.93 10.36 99 1 1 1 0 614.8097 2376.2482 S356s TMT10 349 (R) FHNQLRDsQPPAVPDNRR (Q) FHNQLRDS(1.0)QPPAVPDNRR s:Phosphorylated S PCM1 229381.8 2 11 13.1 1159.95 HUMAN 1 5.5853 -33.5516 FHPDEAESDEDNDVV-p Q9BYG4;S295-p FHPDEAESDEDNDVV 0.77401151582953 0.566312305457701 0.0423333333333333 0.0583333333333334 2.12991844912421 3.33059182270231 0.0423333333333333 0.0583333333333334 0.612361890415565 0.464451979010983 0.53738498206096 0.78667772314151 Q9BYG4 PARD6G Q9BYG4.S295.p_PARD6G Q9BYG4_S295s_1_1_295_295 Q9BYG4 Q9BYG4 Partitioning defective 6 homolog gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22985.22985.4 16.37 16.37 2.793 5 1 1 0 1192.0797 4684.2964 S295s N299n TMT10 284 (R) VLQNFHPDEAEsDEDnDVVIEGTLEPARPPQTPGAPAGSLSR (V) VLQN(0.0)FHPDEAES(0.99)DEDN(0.99)DVVIEGT(0.0)LEPARPPQT(0.0)PGAPAGS(0.0)LS(0.0)R s:Phosphorylated S,n:Deamidated PARD6G 41110.7 2 2 5172.1 22.15 HUMAN 1 2.1299 3.3306 FHSKPVDSDSDDDPL-p Q86XP3;S109-p FHSKPVDSDSDDDPL 0.447474829960627 0.0924312572626126 0.103 0.214 6.44088858091649 13.6791008875223 0.103 0.214 0.226940047751337 0.0428637251253153 1.36274313576634 2.63265191357791 Q86XP3 DDX42 Q86XP3.S109.p_DDX42 Q86XP3_S109sS111s_2_2_109_111 Q86XP3 Q86XP3|J3KTK9 ATP-dependent RNA helicase DDX42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.35250.35972.4 18.63 18.63 4.718 3 2 2 0 999.6911 3835.8121 S109s S111s TMT10 100 (R) QQFHSKPVDsDsDDDPLEAFMAEVEDQAAR (D) QQFHS(0.0)KPVDS(0.99)DS(0.99)DDDPLEAFMAEVEDQAAR K:TMT10,s:Phosphorylated S DDX42 103258.6 21 8 914.1 200.89 HUMAN 1 6.4409 13.6791 FIEADLMSPLDRIAN-p Q9H267;S47-p FIEADLMSPLDRIAN 0.81888464545651 0.174497779839672 0.0346666666666667 0.213 1.67167375726417 9.97182561400653 0.0346666666666667 0.213 0.680507042876663 0.100650848082644 0.434798435815478 1.97601945815351 Q9H267 VPS33B Q9H267.S47.p_VPS33B Q9H267_S47s _1_1_47_47 Q9H267 Q9H267|G3V3F9 Vacuolar protein sorting-associated protein 33B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.34063.34063.3 14.24 14.24 99 1 1 1 0 648.6504 1863.9724 S47s TMT10 38 (K) DLFIEADLMsPLDR (I) DLFIEADLMS(1.0)PLDR s:Phosphorylated S VPS33B 71268.7 1 1 5389.1 19.79 HUMAN 1 1.6717 9.9718 FIFWAPESAPLKSKM-p P23528;S108-p FIFWAPESAPLKSKM 0.0750249088591717 0.0708244771784751 -0.372 -0.280333333333333 24.0971798533255 15.2864561610314 -0.372 -0.280333333333333 0.00389297858469487 0.0296042718706814 -4.8186946267484 -2.93039375935214 P23528 CFL1 P23528.S108.p_CFL1 P23528_S108s _1_1_108_108 P23528 E9PK25|P23528|Q9Y281|G3V1A4|Q9Y281-3 Cofilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32031.32031.4 24.42 25.95 24.418 2 1 1 0 833.47 3250.8897 S108s TMT10 93 (K) ESKKEDLVFIFWAPEsAPLK (S) ES(0.0)KKEDLVFIFWAPES(0.99)APLK K:TMT10,s:Phosphorylated S CFL1 18730.4 2 7 681.1 245.42 HUMAN 1 -24.0972 -15.2865 FIGNLDHSVSEVELR-p Q8NDT2;S347-p FIGNLDHSVSEVELR 0.573095719082952 0.891217719303757 -0.0863333333333333 -0.0166666666666666 4.44910839253911 0.702531403342124 -0.0863333333333333 -0.0166666666666666 0.358995628956173 0.850642073837099 -1.00206110239074 -0.197482826091813 Q8NDT2 RBM15B Q8NDT2.S347.p_RBM15B Q8NDT2_S347s_1_1_347_347 Q8NDT2 Q8NDT2|Q8NDT2-2 Putative RNA-binding protein 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24980.24980.3 12.54 12.54 3.044 2 1 1 0 751.3835 2171.1658 N343n S347s TMT10 338 (R) NLFIGnLDHsVSEVELR (R) N(0.0)LFIGN(0.99)LDHS(0.99)VS(0.0)EVELR n:Deamidated,s:Phosphorylated S RBM15B 97489 2 8 199.1 454.11 HUMAN 1 -4.4491 -0.7025 FIIHNALSHCCLAGK-p Q9P1Y5;S1130-p FIIHNALSHCCLAGK 0.176240941475 0.00626670629603689 0.257333333333333 0.702666666666667 14.974870816941 31.7342539222124 0.257333333333333 0.702666666666667 0.0318062829629691 0.000670771509151728 2.87373950017609 6.96573657344798 Q9P1Y5 CAMSAP3 Q9P1Y5.S1130.p_CAMSAP3 Q9P1Y5_S1130s _1_1_1130_1130 Q9P1Y5 Q9P1Y5-2 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19332.19332.3 18.83 18.83 99 1 1 1 0 760.3924 2199.1931 S1130s TMT10 1123 (K) FIIHNALsHCCLAGK (V) FIIHNALS(1.0)HCCLAGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CAMSAP3 135546 3 25 217.1 432.4 HUMAN 1 14.9749 31.7343 FIKAQDLSNLENTVA-p Q9NQ48;S209-p FIKAQDLSNLENTVA 0.660088859116461 0.432361175666581 0.0616666666666667 -0.124 3.38026756950653 4.85223469590637 0.0616666666666667 -0.124 0.459169722447294 0.32717230251552 0.796645043813375 -1.07669628512776 Q9NQ48 LZTFL1 Q9NQ48.S209.p_LZTFL1 Q9NQ48_S209s _1_1_209_209 Q9NQ48 Q9NQ48|Q9NQ48-2|Q9NQ48-3 Leucine zipper transcription factor-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.31569.31569.3 8.31 8.31 1.317 2 1 1 0 709.0486 2045.1643 S209s TMT10 205 (K) AQDLsNLENTVAALK (S) AQDLS(0.99)NLENT(0.0)VAALK K:TMT10,s:Phosphorylated S LZTFL1 34648.6 1 1 6990.1 8.31 HUMAN 1 3.3803 -4.8522 FIKNLDKSIDNKALY-p Q13310-2;S109-p FIKNLDKSIDNKALY 0.575232245365962 0.0154803912636741 -0.11 -0.444333333333333 4.41710971145776 25.030576887701 -0.11 -0.444333333333333 0.361650465846967 0.00314009155744168 -0.996066993776053 -5.04521802405199 Q13310 PABPC4 Q13310.2.S109.p_PABPC4 Q13310-2_S109s _1_1_109_109 Q13310-2 Q13310-3|P11940|Q13310-2|B1ANR0|E7EQV3 Isoform 2 of Polyadenylate-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11496.11496.3 8.4 2.58 99 1 1 1 0 605.341 1734.0365 S109s TMT10 105 (K) NLDKsIDNK (A) NLDKS(1.0)IDNK K:TMT10,s:Phosphorylated S PABPC4 69805.6 1 8 1996.1 103.46 HUMAN 1 -4.4171 -25.0306 FINQEVKYLFTGLKL-p P54578;Y285-p FINQEVKYLFTGLKL 0.783645315791869 0.0187393220591787 0.045 0.339 2.03640663570823 23.7631249041648 0.045 0.339 0.625690176407056 0.00420424009409599 0.516849539626238 4.73165369503167 P54578 USP14 P54578.Y285.p_USP14 P54578_Y285y _1_1_285_285 P54578 P54578 Ubiquitin carboxyl-terminal hydrolase 14 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.29195.29195.2 12 6.38 6.384 2 1 1 0 690.3906 1299.8077 Y285y TMT10 285 (K) yLFTGLK (L) Y(0.99)LFT(0.0)GLK K:TMT10,y:Phosphorylated Y USP14 56524.5 1 1 295.1 12 HUMAN 1 2.0364 23.7631 FINSRDNSPSLKEIR-p Q8IY22;S349-p FINSRDNSPSLKEIR 0.414816539791492 0.826037616847638 -0.200333333333333 -0.041 7.04922562204457 1.16093667617882 -0.200333333333333 -0.041 0.197277446447673 0.765431502631383 -1.46962717613518 -0.313742764090311 Q8IY22 CMIP Q8IY22.S349.p_CMIP Q8IY22_S349s _1_1_349_349 Q8IY22 Q8IY22|Q8IY22-2|A0A087WY48|Q8IY22-3|A0A087WU05 C-Maf-inducing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8638.8638.2 8.24 4.39 1.4 2 1 1 0 649.8405 1218.7094 S349s TMT10 347 (R) DNsPSLK (E) DNS(0.99)PS(0.0)LK K:TMT10,s:Phosphorylated S CMIP 87755.5 3 1 2381.1 85.8 HUMAN 1 -7.0492 -1.1609 FIQEFPGSPAFAALT-p Q9Y5Y2;S249-p FIQEFPGSPAFAALT 0.478591794394124 0.448641719658816 -0.104 -0.110333333333333 5.88856829891361 4.64112639894584 -0.104 -0.110333333333333 0.257717061054193 0.343468853254134 -1.26468742789583 -1.03766492224424 Q9Y5Y2 NUBP2 Q9Y5Y2.S249.p_NUBP2 Q9Y5Y2_S249s _1_1_249_249 Q9Y5Y2 Q9Y5Y2|H3BQR2|B7Z6P0 Cytosolic Fe-S cluster assembly factor NUBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.35304.35304.4 16.34 14.62 2.234 4 1 1 0 861.4341 3362.7673 S249s TMT10 235 (R) TLEEGHDFIQEFPGsPAFAALTSIAQK (I) T(0.0)LEEGHDFIQEFPGS(0.99)PAFAALT(0.0)S(0.0)IAQK K:TMT10,s:Phosphorylated S NUBP2 29224.2 1 1 5781.1 16.34 HUMAN 1 -5.8886 -4.6411 FIQSRALSVEFPEMM-p P06401;S902-p FIQSRALSVEFPEMM 0.401923670483933 0.00679015120329562 0.141666666666667 0.693333333333333 7.30502490732051 31.1237555713515 0.141666666666667 0.693333333333334 0.185993389624327 0.000772012696633386 1.51430763145774 6.77018605356558 P06401 PGR P06401.S902.p_PGR P06401_S902s _1_1_902_902 P06401 P06401|P06401-5|P06401-2|P06401-3|P06401-4 Progesterone receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.37521.37521.3 18.63 13.48 7.588 2 1 1 0 910.1414 2648.4444 S902s TMT10 900 (R) ALsVEFPEMMSEVIAAQLPK (I) ALS(0.99)VEFPEMMS(0.0)EVIAAQLPK K:TMT10,s:Phosphorylated S PGR 100348.6 1 18 260.1 397.57 HUMAN 1 7.305 31.1238 FIQVFLQSICDGERD-p F5H0U5;S91-p FIQVFLQSICDGERD 0.590748705738669 0.0244781750503597 -0.0806666666666667 0.318 4.21246437718183 21.9399701745588 -0.0806666666666667 0.318 0.379099806087789 0.00639739228916139 -0.957530675051478 4.30368050078612 F5H0U5 NotFound F5H0U5.S91.p_NotFound F5H0U5_S91sT110t_2_2_91_110 F5H0U5 F5H0U5 Glycolipid transfer protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12040.12040.3 9.18 0.92 99 2 2 2 0 1500.7489 4340.3338 S91s T110t TMT10 79 (K) EIGLRFIQVFLQsICDGERDENHPNLIRVNAtK (A) EIGLRFIQVFLQS(1.0)ICDGERDENHPNLIRVNAT(1.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T GLTP 21829.9 1 1 6835.1 9.18 HUMAN 1 -4.2125 21.94 FIRGAQASSGSPALP-p P42684-6;S596-p FIRGAQASSGSPALP 0.674861715319215 0.480293413779679 -0.0756666666666667 -0.136 3.19952639758895 4.25048116757374 -0.0756666666666667 -0.136 0.478682290251804 0.375795766468507 -0.760655019076411 -0.964545638096217 P42684 ABL2 P42684.6.S596.p_ABL2 P42684-6_S596s _1_1_596_596 P42684-6 P42684|P42684-3|P42684-6|P42684-2 Isoform 6 of Abelson tyrosine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8309.8309.4 12.26 12.26 1.113 3 1 1 0 467.0066 1785.0383 S596s TMT10 592 (R) GAQAsSGSPALPRK (Q) GAQAS(0.99)S(0.0)GS(0.0)PALPRK K:TMT10,s:Phosphorylated S ABL2 127186.4 1 3 615.1 261.3 HUMAN 1 -3.1995 -4.2505 FIRGFQLTEHLRLHT-p A0A087WVP9;T345-p FIRGFQLTEHLRLHT 0.729757185802638 0.719231315077257 0.0503333333333333 0.0433333333333334 2.59528892466204 1.97142196448504 0.0503333333333333 0.0433333333333334 0.55013732010863 0.635122946216002 0.636939997331836 0.502405861089723 A0A087WVP9 NotFound A0A087WVP9.T345.p_NotFound A0A087WVP9_T345tT352t_2_2_345_352 A0A087WVP9 Q8TAF7|A0A087WVP9|B4DRP8|Q8TAF7-2|A0A087WV02 Zinc finger protein 461 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9029.9232.4 7.21 1.05 99 2 2 2 0 596.8041 2224.2603 T345t T352t TMT10 341 (R) GFQLtEHLRLHtGEK (P) GFQLT(1.0)EHLRLHT(1.0)GEK K:TMT10,t:Phosphorylated T ZNF461 68107.6 2 2 240.45 415.72 HUMAN 1 2.5953 1.9714 FISLSPGTPPSTLSS-p Q99728;T394-p FISLSPGTPPSTLSS 0.441093698809202 0.167788200693427 0.183666666666667 -0.155 6.54544066894994 10.1995737950797 0.183666666666667 -0.155 0.221541929124052 0.0955086311023399 1.38118606141754 -2.01557208790424 Q99728 BARD1 Q99728.T394.p_BARD1 Q99728_T394t_1_1_394_394 Q99728 Q99728|Q99728-2|Q99728-3 BRCA1-associated RING domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24721.24721.3 7.74 7.74 1.163 12 1 1 0 1024.4637 2990.4251 N382n T394t TMT10 380 (K) NSnMSDEFISLSPGtPPSTLSSSSYR (R) N(0.0)S(0.0)N(0.99)MS(0.0)DEFIS(0.0)LS(0.0)PGT(0.99)PPS(0.0)T(0.0)LS(0.0)S(0.0)S(0.0)S(0.0)Y(0.0)R n:Deamidated,t:Phosphorylated T BARD1 88129.6 2 6 1495.1 136.58 HUMAN 1 6.5454 -10.1996 FITSFGGSDEEAAAA-p A0A0A0MQS2;S335-p FITSFGGSDEEAAAA 0.532600177749201 0.119966780701126 0.092 0.178 5.0631423766151 12.1421272649168 0.092 0.178 0.31166336998366 0.0610642846042479 1.11561679738853 2.35637747380854 A0A0A0MQS2 CLASRP A0A0A0MQS2.S335.p_CLASRP A0A0A0MQS2_S335s _1_1_335_335 A0A0A0MQS2 Q8N2M8|A0A0A0MQS2|F5H0Q6|Q8N2M8-4|Q8N2M8-3 CLK4-associating serine/arginine-rich protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.39360.39360.4 34.78 34.78 3.433 7 1 1 0 1140.3345 4478.3356 S335s TMT10 326 (K) ITFITSFGGsDEEAAAAAAAAAASGVTTGKPPAPPQPGGPAPGR (N) IT(0.0)FIT(0.0)S(0.0)FGGS(0.99)DEEAAAAAAAAAAS(0.0)GVT(0.0)T(0.0)GKPPAPPQPGGPAPGR K:TMT10,s:Phosphorylated S CLASRP 77332.1 22 6 1177.1 169.72 HUMAN 1 5.0631 12.1421 FIWNNMGSQGIQETG-p Q96DT7;S565-p FIWNNMGSQGIQETG 0.487704096786122 0.227453984781974 0.107333333333333 0.132666666666667 5.74669303763182 8.47160604011087 0.107333333333333 0.132666666666667 0.266275185701991 0.142180290092004 1.2393045920324 1.71631164614504 Q96DT7 ZBTB10 Q96DT7.S565.p_ZBTB10 Q96DT7_S565s _1_1_565_565 Q96DT7 Q96DT7 Zinc finger and BTB domain-containing protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28312.28312.3 10.04 10.04 10.044 2 1 1 0 816.4092 2367.2531 S565s TMT10 557 (K) VFIWNNMGsQGIQETGK (T) VFIWNNMGS(0.99)QGIQET(0.0)GK K:TMT10,s:Phosphorylated S ZBTB10 96033.4 1 3 3046.1 62.23 HUMAN 1 5.7467 8.4716 FKDFAARSPSASITD-p Q86W92-2;S993-p FKDFAARSPSASITD 0.146674740935683 0.0428547818934897 -0.254666666666667 -0.302666666666667 16.9608848952259 18.329146206636 -0.254666666666667 -0.302666666666667 0.0201331398596938 0.0146921508693066 -3.25493470975458 -3.52623348855083 Q86W92 PPFIBP1 Q86W92.2.S993.p_PPFIBP1 Q86W92-2_S993s _1_1_993_993 Q86W92-2 Q86W92|Q86W92-2|Q86W92-4|Q86W92-3 Isoform 2 of Liprin-beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16149.16149.3 14.33 14.33 1.967 5 1 1 0 730.9967 2111.009 S993s TMT10 988 (K) DFAARsPSASITDEDSNV (-) DFAARS(0.99)PS(0.0)AS(0.0)IT(0.0)DEDS(0.0)NV s:Phosphorylated S PPFIBP1 113749.6 2 17 449.1 309.07 HUMAN 1 -16.9609 -18.3291 FKDGKQISPKSDHYT-p Q8WX93;S1042-p FKDGKQISPKSDHYT 0.104209357384164 0.0107507387564347 1.13766666666667 -1.07333333333333 20.7067978284458 27.5968284817751 1.13766666666667 -1.07333333333333 0.00849806829825379 0.00173907035441598 4.03230559426497 -5.7248608713377 Q8WX93 PALLD Q8WX93.S1042.p_PALLD Q8WX93_S1042s _1_1_1042_1042 Q8WX93 Q8WX93|Q8WX93-5|Q8WX93-9|Q8WX93-2|Q8WX93-3|Q8WX93-8 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8186.8186.3 7.12 7.12 99 1 1 1 0 547.3179 1559.9724 S1042s TMT10 1037 (K) DGKQIsPK (S) DGKQIS(1.0)PK K:TMT10,s:Phosphorylated S PALLD 151930.4 1 11 338.1 354.43 HUMAN 1 20.7068 -27.5968 FKDLSIRSVRLVRDK-p Q15056;S69-p FKDLSIRSVRLVRDK 0.928566654452394 0.875224471585651 -0.0136666666666667 -0.022 0.638742230020098 0.815046466934558 -0.0136666666666667 -0.022 0.863228513112556 0.828887047625713 -0.180632575391637 -0.226797055573268 Q15056 EIF4H Q15056.S69.p_EIF4H Q15056_S69s _1_1_69_69 Q15056 Q15056|Q15056-2 Eukaryotic translation initiation factor 4H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10110.10110.3 7.41 7.41 1.283 2 1 1 0 418.8973 1174.7105 S69s TMT10 64 (K) DLSIRsVR (L) DLS(0.0)IRS(0.99)VR s:Phosphorylated S EIF4H 27441.6 1 3 2065.1 99.65 HUMAN 1 -0.6387 -0.815 FKEEMPITPYECPLL-p A0A1W2PP71;T200-p FKEEMPITPYECPLL 0.711135890361387 0.46110726927512 -0.0576666666666667 -0.0863333333333333 2.78441714638409 4.48332357826416 -0.0576666666666667 -0.0863333333333333 0.526693896161049 0.356178452079383 -0.676274200612551 -1.00827502881291 A0A1W2PP71 NotFound A0A1W2PP71.T200.p_NotFound A0A1W2PP71_T200t _1_1_200_200 A0A1W2PP71 A0A1W2PP71|Q96MP8|Q96MP8-2 BTB/POZ domain-containing protein KCTD7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32865.32865.4 20.74 20 2.196 3 1 1 0 809.1566 3153.6551 T200t TMT10 190 (K) VCVFKEEMPItPYECPLLNSLR (F) VCVFKEEMPIT(0.99)PY(0.0)ECPLLNS(0.0)LR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T KCTD7 35359.6 1 1 5307.1 20.74 HUMAN 1 -2.7844 -4.4833 FKEKAVASPEATVSQ-p Q641Q2;S498-p FKEKAVASPEATVSQ 0.644544845224666 0.00999727646266983 -0.068 -0.540333333333333 3.56904830466404 28.1007762645448 -0.068 -0.540333333333333 0.439637945361298 0.00154853980582035 -0.833801061492076 -5.865924835487 Q641Q2 FAM21A Q641Q2.S498.p_FAM21A Q641Q2_S498s _1_1_498_498 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2|Q9Y4E1-4|Q9Y4E1-2|E7ESD2|Q9Y4E1-6|Q9Y4E1-3 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12654.12654.2 20.33 20.33 2.451 4 1 1 0 1093.0433 2105.1126 S498s TMT10 495 (K) AVAsPEATVSQTDENK (A) AVAS(0.99)PEAT(0.0)VS(0.0)QT(0.0)DENK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 1 30 12.1 1178.3 HUMAN 1 -3.569 -28.1008 FKEKNKNSDGGSDPE-p O75554;S258-p FKEKNKNSDGGSDPE 0.039271926938295 0.102820067600933 1.23466666666667 -0.328 31.8363675750497 13.0487425175238 1.23466666666667 -0.328 0.000655183938680779 0.0495593667216281 7.01089232249796 -2.5184658002577 O75554 WBP4 O75554.S258.p_WBP4 O75554_S258sS262s_2_2_258_262 O75554 O75554|O75554-2 WW domain-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6888.6888.3 9.08 3.61 7.763 3 2 2 0 937.4644 2650.4454 S258s S262s TMT10 255 (K) NKNsDGGsDPETQKEK (S) NKNS(0.99)DGGS(0.99)DPET(0.0)QKEK K:TMT10,s:Phosphorylated S WBP4 42677.2 5 3 2955.1 64.79 HUMAN 1 31.8364 -13.0487 FKENKEPSPKAKRKR-p B2RTY4-5;S1593-p FKENKEPSPKAKRKR 0.178441218280072 0.0106218169506843 0.289 0.405333333333333 14.7830641581309 27.6823478950281 0.289 0.405333333333333 0.0332424928629931 0.00170516029122533 2.83786283361385 5.74861540175844 B2RTY4 MYO9A B2RTY4.5.S1593.p_MYO9A B2RTY4-5_S1593s _1_1_1593_1593 B2RTY4-5 B2RTY4-4|B2RTY4-2|H3BRD5|B2RTY4-5 Isoform 5 of Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9259.9259.3 10.92 5.1 99 1 1 1 0 777.103 2249.3311 S1593s TMT10 1585 (K) EFKENKEPsPK (A) EFKENKEPS(1.0)PK K:TMT10,s:Phosphorylated S MYO9A 267577.4 7 16 457.1 306.95 HUMAN 1 14.7831 27.6823 FKEQLTPSQIMSLEK-p Q00059;S124-p FKEQLTPSQIMSLEK 0.139286671509888 0.58197160282358 0.298 0.0636666666666667 17.5316304963538 3.17330149085615 0.298 0.0636666666666667 0.0176537491155928 0.481581561885391 3.36808881571594 0.755287675268282 Q00059 TFAM Q00059.S124.p_TFAM Q00059_S124s _1_1_124_124 Q00059 Q00059|Q00059-2 Transcription factor A, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25843.25843.3 15.16 15.16 2.762 3 1 1 0 849.468 2466.4245 S124s TMT10 117 (R) FKEQLTPsQIMSLEK (E) FKEQLT(0.0)PS(0.99)QIMS(0.0)LEK K:TMT10,s:Phosphorylated S TFAM 29324.3 6 1 2428.1 83.92 HUMAN 1 17.5316 3.1733 FKERWQRTPSNELYK-p Q8WUM4-2;T484-p FKERWQRTPSNELYK 0.341848649788872 0.478337582656784 0.134666666666667 0.0666666666666667 8.66360858356918 4.27189993583299 0.134666666666667 0.0666666666666667 0.136031391829438 0.373946959515905 1.75013263727052 0.968587285765605 Q8WUM4 PDCD6IP Q8WUM4.2.T484.p_PDCD6IP Q8WUM4-2_T484t _1_1_484_484 Q8WUM4-2 Q8WUM4-2 Isoform 2 of Programmed cell death 6-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14331.14331.3 13.35 13.35 4.988 4 1 1 0 801.4061 2322.2404 T484t Hydrogen 484 (R) tPSNELYKPLRAEGTNFR (T) T(0.99)PS(0.0)NELY(0.0)KPLRAEGT(0.0)NFR K:TMT10-Lys-Only,t:Phosphorylated T PDCD6IP 97397.8 8 2 2197.1 93.8 HUMAN 1 8.6636 4.2719 FKFGNELSADDLGHK-p Q15147-5;S521-p FKFGNELSADDLGHK 0.22202506952008 0.359028457329618 -0.416666666666667 0.117 12.5790464477156 5.90305684084469 -0.416666666666667 0.117 0.0552198668659087 0.2568587211267 -2.43548276419469 1.26697781515473 Q15147 PLCB4 Q15147.5.S521.p_PLCB4 Q15147-5_S521s _1_1_521_521 Q15147-5 Q15147-4|Q15147-5|Q15147-2 Isoform 4 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17074.17074.3 14.32 9.42 99 1 1 1 0 647.6566 1860.9856 S521s TMT10 516 (K) FGNELsADDLGHK (E) FGNELS(1.0)ADDLGHK K:TMT10,s:Phosphorylated S PLCB4 136983.7 1 3 1968.1 104.91 HUMAN 1 -12.579 5.9031 FKGFSCLSLPSSWDY-p Q8N7I0;S128-p FKGFSCLSLPSSWDY 0.0948633510902073 0.226179258836735 0.334 -0.119333333333333 21.7391891550385 8.50162709756723 0.334 -0.119333333333333 0.00670009691196832 0.141200843223183 4.26254198730351 -1.7215061951143 Q8N7I0 NotFound Q8N7I0.S128.p_NotFound Q8N7I0_S128s _1_1_128_128 Q8N7I0 Q8N7I0 Protein GVQW1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23474.23474.3 13.64 6.29 11.232 5 1 1 0 714.0013 2060.0221 S128s TMT10 123 (K) GFSCLsLPSSWDYRR (A) GFS(0.0)CLS(0.99)LPS(0.0)S(0.0)WDY(0.0)RR C:Carbamidomethylation,s:Phosphorylated S GVQW1 21935.5 1 1 6145.1 13.64 HUMAN 1 21.7392 -8.5016 FKGLKRFSLSAKVVD-p Q86U86;S1278-p FKGLKRFSLSAKVVD 0.534390357489892 0.019554711833538 -0.098 0.354333333333333 5.03914335029517 23.4605291187993 -0.098 0.354333333333333 0.313390382865342 0.00450761783037026 -1.1112265286871 4.65879434827173 Q86U86 PBRM1 Q86U86.S1278.p_PBRM1 Q86U86_S1278s _1_1_1278_1278 Q86U86 Q86U86|Q86U86-8|Q86U86-2 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13093.13093.3 7.44 7.44 7.437 2 1 1 0 449.5924 1266.7934 S1278s TMT10 1276 (K) RFsLSAK (V) RFS(0.99)LS(0.0)AK K:TMT10,s:Phosphorylated S PBRM1 194199.5 2 18 194.1 462.54 HUMAN 1 -5.0391 23.4605 FKHQRQLSLPLTQSK-p Q9C0I1;S564-p FKHQRQLSLPLTQSK 0.943968007474156 0.994484459808709 0.0126666666666667 0.00100000000000002 0.493860841792486 0.0336096641488973 0.0126666666666667 0.00100000000000002 0.892511695482181 0.99229095710906 0.141609011402411 0.0101154265366788 Q9C0I1 MTMR12 Q9C0I1.S564.p_MTMR12 Q9C0I1_S564s_1_1_564_564 Q9C0I1 Q9C0I1|Q9C0I1-2|Q9C0I1-3 Myotubularin-related protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27210.27210.2 14.9 14.9 10.573 3 1 1 0 703.877 1343.8096 Q562q S564s Hydrogen 562 (R) qLsLPLTQSK (S) Q(1.0)LS(0.99)LPLT(0.0)QS(0.0)K K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S MTMR12 87230.2 4 1 4457.1 31.11 HUMAN 1 0.4939 0.0336 FKIDSNISPKKDSKE-p Q9H501;S153-p FKIDSNISPKKDSKE 0.902824138970015 0.00144666310563064 -0.0283333333333333 -0.974333333333333 0.871231476346212 45.7889418115575 -0.0283333333333333 -0.974333333333333 0.818232738873183 2.63697382440476e-05 -0.241258807742139 -13.0688704106859 Q9H501 ESF1 Q9H501.S153.p_ESF1 Q9H501_S153s _1_1_153_153 Q9H501 Q9H501 ESF1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17696.17696.2 13.77 8.08 2.218 2 1 1 0 958.546 1836.1198 S153s TMT10 146 (K) FKIDSNIsPK (K) FKIDS(0.0)NIS(0.99)PK K:TMT10,s:Phosphorylated S ESF1 99193.8 13 3 500.1 291.39 HUMAN 1 -0.8712 -45.7889 FKKEFAPSDEELDSY-p O75391;S114-p FKKEFAPSDEELDSY 0.603085598910672 0.458020049166311 -0.1 -0.0763333333333333 4.0573519754099 4.52116436060012 -0.1 -0.0763333333333333 0.39288441587433 0.353088492686202 -0.928076722060357 -1.01534014020129 O75391 SPAG7 O75391.S114.p_SPAG7 O75391_S114s _1_1_114_114 O75391 O75391|I3L4C3|I3L0X5 Sperm-associated antigen 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17838.17838.2 18.62 18.62 6.427 3 1 1 0 933.9037 1786.8333 S114s TMT10 110 (K) EFAPsDEELDSYR (R) EFAPS(0.99)DEELDS(0.0)Y(0.0)R s:Phosphorylated S SPAG7 26148.1 3 2 1832.1 112.27 HUMAN 1 -4.0574 -4.5212 FKKIERHSIHWPCRL-p P13010;S244-p FKKIERHSIHWPCRL 0.590876065472109 0.632204988280449 0.0796666666666667 0.094 4.20899445627936 2.70758847233815 0.0796666666666667 0.094 0.379402819836056 0.53609425449259 0.956874156868733 0.660279982461318 P13010 XRCC5 P13010.S244.p_XRCC5 P13010_S244s _1_1_244_244 P13010 P13010 X-ray repair cross-complementing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7891.7891.5 11.46 11.46 99 1 1 1 0 432.2317 2077.1642 S244s TMT10 239 (K) KIERHsIHWPCR (L) KIERHS(1.0)IHWPCR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S XRCC5 83273.6 4 3 1948.1 105.79 HUMAN 1 4.209 2.7076 FKKPFKLSGLSFKRN-p P49006;S101-p FKKPFKLSGLSFKRN 0.247829677912706 0.563467529800458 -0.869333333333333 -0.0809999999999999 11.5765464885658 3.35709322057641 -0.869333333333334 -0.0809999999999999 0.0695577221005826 0.461626442700563 -2.2574429603861 -0.791934917653044 P49006 MARCKSL1 P49006.S101.p_MARCKSL1 P49006_S101s _1_1_101_101 P49006 P49006 MARCKS-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26931.26931.3 11.03 11.03 1.715 2 1 1 0 631.0417 1811.1398 S101s TMT10 97 (K) PFKLsGLSFK (R) PFKLS(0.99)GLS(0.0)FK K:TMT10,s:Phosphorylated S MARCKSL1 19585.5 3 6 402.1 327.42 HUMAN 1 -11.5765 -3.3571 FKLERERSYELVRSA-p Q9UGL1-2;S1492-p FKLERERSYELVRSA 0.384747206388685 0.0134141613263923 0.127666666666667 0.438333333333333 7.67938724273386 26.0422699013963 0.127666666666667 0.438333333333333 0.170632312154236 0.00248755682177386 1.57948840657052 5.30570330176944 Q9UGL1 KDM5B Q9UGL1.2.S1492.p_KDM5B Q9UGL1-2_S1492s _1_1_1492_1492 Q9UGL1-2 Q9UGL1-2 Isoform 2 of Lysine-specific demethylase 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8054.8054.3 11.8 3.38 5.6 2 1 1 0 454.2323 1280.716 S1492s TMT10 1490 (R) ERsYELVR (S) ERS(0.99)Y(0.0)ELVR s:Phosphorylated S KDM5B 182657.7 2 4 3314.1 54.16 HUMAN 1 7.6794 26.0423 FKLQPSSSPENSLDP-p Q8WWM7-3;S559-p FKLQPSSSPENSLDP 0.851695487788593 0.275390859448174 0.0313333333333333 -0.136666666666667 1.34997037938087 7.38025302290091 0.0313333333333333 -0.136666666666667 0.732829531312106 0.182799371289089 0.359498913578326 -1.52697883050742 Q8WWM7 ATXN2L Q8WWM7.3.S559.p_ATXN2L Q8WWM7-3_S558sS559s_2_2_558_559 Q8WWM7-3 Q8WWM7-3|H3BUF6|Q8WWM7-2|Q8WWM7-9|Q8WWM7-4|Q8WWM7-5|Q8WWM7-8|Q8WWM7-6 Isoform 3 of Ataxin-2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26878.26878.3 14.48 14.48 1.439 4 2 2 0 753.0103 2097.0814 S558s S559s TMT10 554 (K) LQPSssPENSLDPFPPR (I) LQPS(0.0)S(0.99)S(0.99)PENS(0.0)LDPFPPR s:Phosphorylated S ATXN2L 116093.7 3 27 184.1 476.17 HUMAN 1 1.35 -7.3803 FKNKGKDSTEMRRRR-p P52292;S24-p FKNKGKDSTEMRRRR 0.14653188241737 0.00477349932614541 0.315666666666667 -0.709 16.9845463808089 33.9248160604413 0.315666666666667 -0.709 0.0200237475806692 0.000405059100503995 3.25959169885862 -7.70666559491051 P52292 KPNA2 P52292.S24.p_KPNA2 P52292_S24s _1_1_24_24 P52292 P52292 Importin subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3532.3532.4 7.38 7.38 1.128 2 1 1 0 405.2104 1537.8521 S24s TMT10 21 (K) GKDsTEMRR (R) GKDS(0.99)T(0.0)EMRR K:TMT10,s:Phosphorylated S KPNA2 58203.2 3 1 1475.1 139.39 HUMAN 1 16.9845 -33.9248 FKNVDLLSDMVQEHD-p F5H4R6;S182-p FKNVDLLSDMVQEHD 0.566212239029028 0.26688554068129 -0.08 -0.154333333333333 4.55032647992859 7.55396381252697 -0.08 -0.154333333333333 0.35072550724809 0.175631988630124 -1.0209681406715 -1.5572099114586 F5H4R6 NAP1L1 F5H4R6.S182.p_NAP1L1 F5H4R6_S182s_1_1_182_182 F5H4R6 P55209|F5H4R6|F8W0J6|P55209-2 Nucleosome assembly protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28196.28196.3 7.43 7.43 99 1 1 1 0 878.7797 2553.3635 N177n S182s TMT10 177 (K) nVDLLsDMVQEHDEPILK (H) N(1.0)VDLLS(1.0)DMVQEHDEPILK K:TMT10,n:Deamidated,s:Phosphorylated S NAP1L1 44911.2 1 5 836.1 215.14 HUMAN 1 -4.5503 -7.554 FKPDDGISPERAAQV-p Q96I24;S296-p FKPDDGISPERAAQV 0.833574071653314 0.322706764666212 0.031 -0.0966666666666666 1.52462236874797 6.49393234736626 0.031 -0.0966666666666666 0.703943435134522 0.224185110598571 0.400748385930442 -1.37175232732865 Q96I24 FUBP3 Q96I24.S296.p_FUBP3 Q96I24_S296s _1_1_296_296 Q96I24 Q96I24 Far upstream element-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21691.21691.4 18.16 13.95 99 1 1 1 0 766.3947 2982.5871 S296s TMT10 287 (R) IQFKPDDGIsPERAAQVMGPPDR (C) IQFKPDDGIS(1.0)PERAAQVMGPPDR K:TMT10,s:Phosphorylated S FUBP3 61981.6 4 5 858.1 210.79 HUMAN 1 1.5246 -6.4939 FKPIKHGSPEFCGIL-p Q15464;S388-p FKPIKHGSPEFCGIL 0.0651762166919556 0.0340224120170806 -0.741333333333333 0.342 25.6194961252531 19.7909378449685 -0.741333333333333 0.342 0.00274189227178625 0.0104931580780967 -5.20240667377669 3.83068954098276 Q15464 SHB Q15464.S388.p_SHB Q15464_S388s _1_1_388_388 Q15464 Q15464 SH2 domain-containing adapter protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23254.23254.4 17.67 15.91 99 1 1 1 0 737.1315 2865.5333 S388s TMT10 386 (K) HGsPEFCGILGERVDPAVPLEK (Q) HGS(1.0)PEFCGILGERVDPAVPLEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SHB 55783 4 5 1825.1 112.53 HUMAN 1 -25.6195 19.7909 FKPLALKTPPRVLTL-p Q9GZY8-4;T89-p FKPLALKTPPRVLTL 0.52190969118178 0.0484379931481338 -0.119333333333333 -0.251666666666667 5.22187516331752 17.5828248377097 -0.119333333333333 -0.251666666666667 0.300477864228551 0.0174468696448915 -1.1445668359625 -3.37564049266775 Q9GZY8 MFF Q9GZY8.4.T89.p_MFF Q9GZY8-4_T89t _1_1_89_89 Q9GZY8-4 Q9GZY8|Q9GZY8-2|Q9GZY8-3|Q9GZY8-5|A0A0A0MS29|Q9GZY8-4 Isoform 4 of Mitochondrial fission factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29702.29702.5 17.51 13.84 2.166 5 1 1 0 935.5182 4593.6012 T89t TMT10 57 (R) IVVAGNNEDVSFSRPADLDLIQSTPFKPLALKtPPR (V) IVVAGNNEDVS(0.0)FS(0.0)RPADLDLIQS(0.0)T(0.0)PFKPLALKT(0.99)PPR K:TMT10,t:Phosphorylated T MFF 25066.2 4 5 1266.1 160.29 HUMAN 1 -5.2219 -17.5828 FKQGLSVSPFPKKRG-p Q9NR48;S884-p FKQGLSVSPFPKKRG 0.661841237823599 0.00171671240553537 -0.0673333333333333 -0.835666666666667 3.35710255435398 43.8712625950765 -0.0673333333333333 -0.835666666666667 0.461625450582522 4.10084864446005e-05 -0.792055746038044 -12.0175605565761 Q9NR48 ASH1L Q9NR48.S884.p_ASH1L Q9NR48_S884s _1_1_884_884 Q9NR48 Q9NR48|Q9NR48-2 Histone-lysine N-methyltransferase ASH1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17968.17968.3 13.96 9.35 1.586 2 1 1 0 652.3826 1875.1671 S884s TMT10 879 (K) QGLSVsPFPKK (R) QGLS(0.0)VS(0.99)PFPKK K:TMT10,s:Phosphorylated S ASH1L 336378.7 3 8 245.1 412 HUMAN 1 -3.3571 -43.8713 FKQSMSLTPPLIEVL-p Q9NVR5;T650-p FKQSMSLTPPLIEVL 0.430459384492558 0.0728218660073545 -0.186 0.228333333333333 6.74097748864866 15.1149188426136 -0.186 0.228333333333333 0.211788439860121 0.0307969789182988 -1.41559208090847 2.8981232695605 Q9NVR5 DNAAF2 Q9NVR5.T650.p_DNAAF2 Q9NVR5_T650t _1_1_650_650 Q9NVR5 Q9NVR5 Protein kintoun HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37284.37284.3 18.07 18.07 1.146 4 1 1 0 884.4803 2571.4468 T650t TMT10 645 (K) QSMSLtPPLIEVLQVTDNK (I) QS(0.0)MS(0.0)LT(0.99)PPLIEVLQVT(0.0)DNK K:TMT10,t:Phosphorylated T DNAAF2 91968.6 3 2 2831.1 68.73 HUMAN 1 -6.741 15.1149 FKRKYGKSLYYYIQQ-p P07355;S314-p FKRKYGKSLYYYIQQ 0.299702423811655 0.0347677052789133 -0.168666666666667 0.456333333333333 9.8381951114552 19.6453885922723 -0.168666666666667 0.456333333333333 0.103795969284482 0.0108507845607413 -1.953612654911 3.79978144089264 P07355 ANXA2 P07355.S314.p_ANXA2 P07355_S314s _1_1_314_314 P07355 P07355-2 Annexin A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24514.24514.3 9.84 9.84 1.803 5 1 1 0 654.001 1880.0206 S314s TMT10 314 (K) sLYYYIQQDTK (G) S(0.99)LY(0.0)Y(0.0)Y(0.0)IQQDT(0.0)K K:TMT10,s:Phosphorylated S ANXA2 38831.6 1 17 537.1 277.57 HUMAN 1 -9.8382 19.6454 FKSGLNGSILAEREE-p Q96H22-3;S282-p FKSGLNGSILAEREE 0.82086427017453 0.00840448513471 -0.0323333333333333 -0.52 1.6534988406322 29.4765946137124 -0.0323333333333333 -0.52 0.683360884074828 0.00112808165992471 -0.430622037569288 -6.26474090410583 Q96H22 CENPN Q96H22.3.S282.p_CENPN Q96H22-3_S282s_1_1_282_282 Q96H22-3 Q96H22-3|Q96H22-4|Q96H22-5 Isoform 3 of Centromere protein N HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18157.18157.3 12.8 10.33 3.939 2 1 1 0 684.3514 1970.0868 N280n S282s TMT10 277 (K) SGLnGsILAEREEPLR (C) S(0.0)GLN(1.0)GS(0.99)ILAEREEPLR n:Deamidated,s:Phosphorylated S CENPN 41478.9 4 4 2611.1 76.75 HUMAN 1 -1.6535 -29.4766 FKSNDRNSMDIQCEV-p Q02241;S160-p FKSNDRNSMDIQCEV 0.490214660431765 0.0373113671420933 0.100666666666667 0.267333333333333 5.70652996254538 19.1920074346541 0.100666666666667 0.267333333333333 0.268749090845061 0.0120447906663289 1.2321027365832 3.70436302802875 Q02241 KIF23 Q02241.S160.p_KIF23 Q02241_S160s _1_1_160_160 Q02241 Q02241|H7BYN4|Q02241-2|H0YME6 Kinesin-like protein KIF23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27271.27478.3 15.76 15.76 3.448 2 1 1 0 858.7236 2494.1864 S160s TMT10 155 (K) SNDRNsMDIQCEVDALLER (Q) S(0.0)NDRNS(0.99)MDIQCEVDALLER C:Carbamidomethylation,s:Phosphorylated S KIF23 111083.9 6 4 352.1 350.35 HUMAN 1 5.7065 19.192 FKSPITSSPPKWMAE-p Q52LA3;S53-p FKSPITSSPPKWMAE 0.474773316010134 1 -0.102 1.85037170770859e-17 5.9585979618878 9.64327466553287e-16 -0.102 2.00308613164955e-17 0.253594718125004 1 -1.27718462879326 2.78385056453803e-16 Q52LA3 LIN52 Q52LA3.S53.p_LIN52 Q52LA3_S53s _1_1_53_53 Q52LA3 Q52LA3 Protein lin-52 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31736.31736.5 17.89 17.89 1.121 4 1 1 0 686.1588 3346.7994 S53s TMT10 48 (K) SPITSsPPKWMAEIERDDIDMLK (E) S(0.0)PIT(0.0)S(0.0)S(0.99)PPKWMAEIERDDIDMLK K:TMT10,s:Phosphorylated S LIN52 13000.7 5 2 2091.1 97.98 HUMAN 1 -5.9586 0 FKSSQGDSGVDLSAE-p Q5JSZ5;S1671-p FKSSQGDSGVDLSAE 0.343780469029371 0.925061923035735 0.17 0.0106666666666667 8.61198229760985 0.478058371907519 0.17 0.0106666666666667 0.137658099761553 0.89576515149176 1.74119516676125 0.137277530441535 Q5JSZ5 PRRC2B Q5JSZ5.S1671.p_PRRC2B Q5JSZ5_S1671s _1_1_1671_1671 Q5JSZ5 Q5JSZ5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8848.8848.3 7.32 7.32 2.661 5 1 1 0 601.9379 1723.8296 S1671s TMT10 1666 (K) SSQGDsGVDLSAESR (E) S(0.0)S(0.0)QGDS(0.99)GVDLS(0.0)AES(0.0)R s:Phosphorylated S PRRC2B 244103.4 1 79 36.2 882.05 HUMAN 1 8.612 0.4781 FKTADSVSPLEPPTK-p Q9UMZ2;S580-p FKTADSVSPLEPPTK 0.364547707012474 0.0108941853364851 -0.152333333333333 -0.453333333333333 8.1325464448085 27.4981193930655 -0.152333333333333 -0.453333333333333 0.153725302216395 0.00177904961756076 -1.65814634775367 -5.69753516491297 Q9UMZ2 SYNRG Q9UMZ2.S580.p_SYNRG Q9UMZ2_S580s _1_1_580_580 Q9UMZ2 Q9UMZ2|Q9UMZ2-5|Q9UMZ2-7|Q9UMZ2-3|Q9UMZ2-8|Q9UMZ2-4|Q9UMZ2-9|Q9UMZ2-6 Synergin gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16081.16081.3 13.39 13.39 2.524 4 1 1 0 627.3329 1800.0155 S580s TMT10 575 (K) TADSVsPLEPPTK (D) T(0.0)ADS(0.0)VS(0.99)PLEPPT(0.0)K K:TMT10,s:Phosphorylated S SYNRG 141393.5 3 4 236.1 418.49 HUMAN 1 -8.1325 -27.4981 FKTEGPDSD______-p P04637;S392-p FKTEGPDSD______ 0.339510283609401 0.172165743126456 0.223666666666667 -0.464 8.72899646704734 10.0446950426782 0.223666666666667 -0.464 0.133998628496803 0.0989761361500212 1.76145182386974 -1.9886683494141 P04637 TP53 P04637.S392.p_TP53 P04637_S392s _1_1_392_392 P04637 P04637|A0A087WZU8|P04637-4|P04637-7|A0A087X1Q1 Cellular tumor antigen p53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21755.22373.3 15.61 15.61 8.248 2 1 1 0 593.2875 1697.882 S392s TMT10 383 (K) LMFKTEGPDsD (-) LMFKT(0.0)EGPDS(0.99)D K:TMT10,s:Phosphorylated S TP53 44223 41 8 1419.1 144.35 HUMAN 1 8.729 -10.0447 FKTPGLRTPAAGERI-p Q53HL2;T204-p FKTPGLRTPAAGERI 0.195833302355488 0.00375319309154526 0.303666666666667 -0.645 13.811659376703 35.9843125877552 0.303666666666667 -0.645 0.0415751727391772 0.000252097617451998 2.65840352641156 -8.46372887943102 Q53HL2 CDCA8 Q53HL2.T204.p_CDCA8 Q53HL2_T204t _1_1_204_204 Q53HL2 Q53HL2 Borealin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6231.6231.3 12.05 9.21 3.727 2 1 1 0 512.2698 1454.8277 T204t TMT10 199 (K) TPGLRtPAAGER (I) T(0.0)PGLRT(0.99)PAAGER t:Phosphorylated T CDCA8 31436.5 4 3 2168.1 94.69 HUMAN 1 13.8117 -35.9843 FKYPSSVSAITDIKR-p Q8IUR7;S339-p FKYPSSVSAITDIKR 0.279550798260331 0.00295295766305267 -0.361 0.782 10.4659938130699 38.1302782047989 -0.361 0.782 0.0898257017379443 0.000153805611077654 -2.06279876499876 9.32137203851941 Q8IUR7 ARMC8 Q8IUR7.S339.p_ARMC8 Q8IUR7_S339s _1_1_339_339 Q8IUR7 Q8IUR7|Q8IUR7-2|Q8IUR7-7|Q8IUR7-3|B7Z637|G5E9V6|Q8IUR7-6 Armadillo repeat-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24473.24473.3 11.23 6.95 2.638 5 1 1 0 606.9933 1738.9991 S339s TMT10 334 (K) YPSSVsAITDIK (R) Y(0.0)PS(0.0)S(0.0)VS(0.99)AIT(0.0)DIK K:TMT10,s:Phosphorylated S ARMC8 76649.1 3 1 4865.1 25.7 HUMAN 1 -10.466 38.1303 FLAAFEGSDGNKVKT-p O15042;S127-p FLAAFEGSDGNKVKT 0.534390357489892 0.0347673752222139 -0.246666666666667 0.287333333333333 5.03933802673735 19.6467628189544 -0.246666666666667 0.287333333333333 0.313376335171921 0.0108473516185001 -1.11126215627789 3.80007263086901 O15042 U2SURP O15042.S127.p_U2SURP O15042_S127s _1_1_127_127 O15042 O15042|O15042-2|E7ET15|E7EW00 U2 snRNP-associated SURP motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.34710.34710.3 19.33 19.33 14.989 2 1 1 0 890.7618 2590.3077 S127s TMT10 112 (K) AAAEIYEEFLAAFEGsDGNK (V) AAAEIY(0.0)EEFLAAFEGS(0.99)DGNK K:TMT10,s:Phosphorylated S U2SURP 118746.2 1 4 360.1 345.29 HUMAN 1 -5.0393 19.6468 FLDKSTASPASTKTG-p Q9ULU4-19;S502-p FLDKSTASPASTKTG 0.0404299711718947 0.0033898894582079 0.549666666666667 0.676333333333333 31.1458366749112 36.9248936706747 0.549666666666667 0.676333333333333 0.00076809746628182 0.000203006822188238 6.78846539781702 8.83059412652925 Q9ULU4 ZMYND8 Q9ULU4.19.S502.p_ZMYND8 Q9ULU4-19_S502s _1_1_502_502 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-21|Q9ULU4-8|Q9ULU4-23|A0A087WYS3|Q9ULU4-17|Q9ULU4-6|Q9ULU4-3|A0A087WV57|Q9ULU4-4 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5336.5336.2 12.92 7.11 1.538 5 1 1 0 694.3659 1307.7571 S502s TMT10 499 (K) STAsPASTK (T) S(0.0)T(0.0)AS(0.99)PAS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S ZMYND8 139738.7 4 7 57.1 712.18 HUMAN 1 31.1458 36.9249 FLEGCACTPERMAEA-p H3BLT4;T34-p FLEGCACTPERMAEA 0.962768040397146 0.0180341739316754 -0.0106666666666667 -0.358 0.318871770282939 24.0159445183378 -0.0106666666666667 -0.358 0.9292077491913 0.00396648255145467 -0.093055498561617 -4.79310829855373 H3BLT4 BIRC5 H3BLT4.T34.p_BIRC5 H3BLT4_T34t _1_1_34_34 H3BLT4 O15392-2|H3BLT4|O15392-7 Baculoviral IAP repeat-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25292.25292.3 10.08 10.08 99 1 1 1 0 682.6327 1965.9149 T34t TMT10 24 (K) NWPFLEGCACtPER (M) NWPFLEGCACT(1.0)PER C:Carbamidomethylation,t:Phosphorylated T BIRC5 19036.2 1 1 6695.1 10.08 HUMAN 1 -0.3189 -24.0159 FLENADDSDEDEEND-p Q13033-2;S257-p FLENADDSDEDEEND 0.641749541077827 0.994787146534929 0.062 -0.000666666666666667 3.59880030011588 0.0317212257929293 0.062 -0.000666666666666669 0.436636432513463 0.992722527817322 0.839618541767015 -0.00954911970947028 Q13033 STRN3 Q13033.2.S257.p_STRN3 Q13033-2_S257s _1_1_257_257 Q13033-2 Q13033|Q13033-2|G3V340 Isoform Alpha of Striatin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32822.32822.4 26.37 22.82 7.359 4 1 1 0 1193.5475 4691.1921 S257s TMT10 240 (R) SSGDVLETFNFLENADDsDEDEENDMIEGIPEGKDK (H) S(0.0)S(0.0)GDVLET(0.0)FNFLENADDS(0.99)DEDEENDMIEGIPEGKDK K:TMT10,s:Phosphorylated S STRN3 78142.7 23 7 1014.1 188.21 HUMAN 1 3.5988 -0.0317 FLENYRVSLAEKVIP-p P11216;S652-p FLENYRVSLAEKVIP 0.428532391683672 0.068566248862505 -0.127333333333333 -0.593333333333333 6.77734710614929 15.4812163318998 -0.127333333333333 -0.593333333333334 0.210022241563344 0.0283059911669911 -1.42197990811822 -2.96718751328999 P11216 PYGB P11216.S652.p_PYGB P11216_S652s _1_1_652_652 P11216 P06737|P11216|P11217|E9PK47|P06737-2 Glycogen phosphorylase, brain form HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27515.27515.3 16.36 11.5 10.17 2 1 1 0 740.4148 2139.2578 S652s TMT10 643 (K) VIFLENYRVsLAEK (V) VIFLENY(0.0)RVS(0.99)LAEK K:TMT10,s:Phosphorylated S PYGB 97378.8 1 7 3590.1 47.63 HUMAN 1 -6.7773 -15.4812 FLFDKPVSPLLTAAG-p P12532-2;S263-p FLFDKPVSPLLTAAG 0.906665267605411 0.115550663793221 -0.02 0.199333333333333 0.834742955775175 12.3639993176163 -0.02 0.199333333333333 0.825136321063496 0.0580229851150277 -0.231895780962768 2.39583101631194 P12532 CKMT1B P12532.2.S263.p_CKMT1B P12532-2_S263s _1_1_263_263 P12532-2 P12532-2|F8WCN3 Isoform 2 of Creatine kinase U-type, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34692.34692.4 12.94 12.94 1.865 4 1 1 0 1085.8 4260.2085 S263s TMT10 240 (R) LSEMTEAEQQQLIDDHFLFDKPVsPLLTAAGMAR (D) LS(0.0)EMT(0.0)EAEQQQLIDDHFLFDKPVS(0.99)PLLT(0.0)AAGMAR K:TMT10,s:Phosphorylated S CKMT1A 50933.3 2 4 1688.1 120.83 HUMAN 1 -0.8347 12.364 FLGFSKQSPQKKNHL-p Q460N5;S1411-p FLGFSKQSPQKKNHL 0.398667761739948 0.00165401543705715 -0.149666666666667 -1.10466666666667 7.37095890160079 44.2523828262595 -0.149666666666667 -1.10466666666667 0.183190990070433 3.75631251634404e-05 -1.52580400354592 -12.2199392183189 Q460N5 PARP14 Q460N5.S1411.p_PARP14 Q460N5_S1411s _1_1_1411_1411 Q460N5 Q460N5 Poly [ADP-ribose] polymerase 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26840.26840.4 18.39 18.39 2.848 3 1 1 0 577.0797 2225.3261 S1411s TMT10 1401 (K) LASFLGFSKQsPQK (K) LAS(0.0)FLGFS(0.0)KQS(0.99)PQK K:TMT10,s:Phosphorylated S PARP14 204850.4 4 3 2974.1 64.3 HUMAN 1 -7.371 -44.2524 FLGRSIFSPVVKLNS-p Q9NZM1;S1233-p FLGRSIFSPVVKLNS 0.613896827093699 0.828892841143029 -0.077 -0.0246666666666666 3.93103885971553 1.13874024227369 -0.077 -0.0246666666666666 0.404479126173503 0.769353574264971 -0.903924484593135 -0.3082958437263 Q9NZM1 MYOF Q9NZM1.S1233.p_MYOF Q9NZM1_S1233s _1_1_1233_1233 Q9NZM1 Q9NZM1|Q9NZM1-3|Q9NZM1-6|Q9NZM1-2 Myoferlin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24870.24870.2 10.59 10.59 4.381 2 1 1 0 707.9098 1334.8448 S1233s TMT10 1230 (R) SIFsPVVK (L) S(0.0)IFS(0.99)PVVK K:TMT10,s:Phosphorylated S MYOF 236244.8 2 11 829.1 216.58 HUMAN 1 -3.931 -1.1387 FLGRTDCSPIQFESA-p P52292;S134-p FLGRTDCSPIQFESA 0.619956161074258 0.0159667122347005 -0.0726666666666667 -0.372 3.85968568699176 24.8282727293728 -0.0726666666666667 -0.372 0.411179478420713 0.00328982447351126 -0.890211582469706 -4.99423691554481 P52292 KPNA2 P52292.S134.p_KPNA2 P52292_S134s _1_1_134_134 P52292 P52292 Importin subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.32422.32422.3 30.14 30.14 1.215 8 1 1 0 1127.5411 3300.6458 S134s TMT10 131 (R) TDCsPIQFESAWALTNIASGTSEQTK (A) T(0.0)DCS(0.99)PIQFES(0.0)AWALT(0.0)NIAS(0.0)GT(0.0)S(0.0)EQT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KPNA2 58203.2 2 5 1475.1 139.39 HUMAN 1 -3.8597 -24.8283 FLHLEKKTPVHSRSS-p Q8N5Y2;T392-p FLHLEKKTPVHSRSS 0.0431670381948327 0.0172428931863239 1.02033333333333 0.672666666666667 30.3450305899306 24.3282459959343 1.02033333333333 0.672666666666667 0.00092362768274032 0.00369126649259021 6.53779061761876 4.8697631983531 Q8N5Y2 MSL3 Q8N5Y2.T392.p_MSL3 Q8N5Y2_T392t _1_1_392_392 Q8N5Y2 Q8N5Y2|Q8N5Y2-3|Q8N5Y2-2|P0C860|Q8N5Y2-6|Q8N5Y2-4 Male-specific lethal 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15141.15141.5 11.63 11.63 1.599 2 1 1 0 495.2957 2392.4796 T392t TMT10 384 (K) LFLHLEKKtPVHSR (S) LFLHLEKKT(0.99)PVHS(0.0)R K:TMT10,t:Phosphorylated T MSL3 60279.1 1 4 1755.1 117.41 HUMAN 1 30.345 24.3282 FLIGDSMSPDSDTEL-p Q8TF40;S760-p FLIGDSMSPDSDTEL 0.1768008818503 0.0943294529458211 -0.244 -0.199 14.9249328180589 13.5617294594335 -0.244 -0.199 0.032174123031488 0.0440379459464073 -2.86438408104838 -2.61128999535934 Q8TF40 FNIP1 Q8TF40.S760.p_FNIP1 Q8TF40_S760s _1_1_760_760 Q8TF40 Q8TF40|Q8TF40-3|J3KNG8|A0A087WX11 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29520.29520.3 24.08 24.08 1.627 5 1 1 0 764.6935 2212.1005 S760s TMT10 751 (K) VTFLIGDSMsPDSDTELR (S) VT(0.0)FLIGDS(0.0)MS(0.99)PDS(0.0)DT(0.0)ELR s:Phosphorylated S FNIP1 132549.9 10 19 310.1 372.19 HUMAN 1 -14.9249 -13.5617 FLISPPASPPVGWKQ-p E9PDJ2;S192-p FLISPPASPPVGWKQ 0.231296617020693 0.0326805267702102 -0.176 0.39 12.2241151821729 20.0485250455797 -0.176 0.39 0.0599223009974547 0.00988888884873272 -2.37215058356246 3.88572481234653 E9PDJ2 RCAN1 E9PDJ2.S192.p_RCAN1 E9PDJ2_S192s _1_1_192_192 E9PDJ2 E9PDJ2|P53805|E9PD55|Q9UKA8|Q9UKA8-2|V9GYW9|P53805-2|Q9UKA8-5|P53805-3|P53805-4 Calcipressin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30728.30930.3 16.91 16.91 3.721 2 1 1 0 721.3986 2082.2152 S192s TMT10 184 (K) QFLISPPAsPPVGWK (Q) QFLIS(0.0)PPAS(0.99)PPVGWK K:TMT10,s:Phosphorylated S RCAN1 32059 4 1 2472.1 81.93 HUMAN 1 -12.2241 20.0485 FLKDLVASVPDMQGD-p C9JCC6;S89-p FLKDLVASVPDMQGD 0.665854012351503 0.0348880135637774 -0.058 0.347333333333333 3.301928494607 19.6201490465899 -0.058 0.347333333333333 0.467527488532759 0.0109140287968253 -0.781097685468975 3.79443548032217 C9JCC6 NotFound C9JCC6.S89.p_NotFound C9JCC6_S89s _1_1_89_89 C9JCC6 C9JCC6|Q14919-2 Dr1-associated corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18594.18594.4 19.03 19.03 99 1 1 1 0 721.57 2803.2915 S89s TMT10 85 (K) DLVAsVPDMQGDGEDNHMDGDK (G) DLVAS(1.0)VPDMQGDGEDNHMDGDK K:TMT10,s:Phosphorylated S DRAP1 23318.5 2 2 4957.1 24.71 HUMAN 1 -3.3019 19.6201 FLKKSGLSDIILGKI-p Q9UBC2-2;S49-p FLKKSGLSDIILGKI 0.953803111483038 0.132363579186144 -0.00900000000000001 -0.173 0.402080009861413 11.5773580840965 -0.00900000000000001 -0.173 0.911574145495273 0.0695447245921621 -0.116346305592709 -2.25650653912629 Q9UBC2 EPS15L1 Q9UBC2.2.S49.p_EPS15L1 Q9UBC2-2_S49s _1_1_49_49 Q9UBC2-2 Q9UBC2-2|M0R165|Q9UBC2-3|Q9UBC2-4|M0R1V5|M0R330|K7EJR2 Isoform 2 of Epidermal growth factor receptor substrate 15-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25244.25244.2 11.17 6.76 1.571 2 1 1 0 770.9408 1460.9089 S49s TMT10 46 (K) SGLsDIILGK (I) S(0.0)GLS(0.99)DIILGK K:TMT10,s:Phosphorylated S EPS15L1 99718.3 3 2 109.1 576.24 HUMAN 1 -0.4021 -11.5774 FLKKSGPSLNELIPD-p Q8WYP5-2;S544-p FLKKSGPSLNELIPD 0.424465603303582 0.071916162045882 -0.166 -0.244666666666667 6.86004277623716 15.1937287724034 -0.166 -0.244666666666667 0.206060961700481 0.0302431569134645 -1.4364915109283 -2.91293375541375 Q8WYP5 AHCTF1 Q8WYP5.2.S544.p_AHCTF1 Q8WYP5-2_S544s _1_1_544_544 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21060.21060.3 11.15 7.47 1.164 3 1 1 0 766.7365 2218.2232 S544s TMT10 540 (K) KSGPsLNELIPDGYNR (C) KS(0.0)GPS(0.99)LNELIPDGY(0.0)NR K:TMT10,s:Phosphorylated S AHCTF1 258049.6 1 2 40.1 829.79 HUMAN 1 -6.86 -15.1937 FLKPRCPSLDNLAVP-p O14686-3;S2254-p FLKPRCPSLDNLAVP 0.647342264442296 0.174342105248745 -0.0633333333333333 -0.136333333333333 3.53806976540652 9.9766419449335 -0.0633333333333334 -0.136333333333333 0.442785125786554 0.10053928804494 -0.827732900337071 -1.97685532064756 O14686 KMT2D O14686.3.S2254.p_KMT2D O14686-3_S2254s _1_1_2254_2254 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21791.21791.4 20.17 20.17 6.725 2 1 1 0 598.8052 2312.2321 S2254s TMT10 2252 (R) CPsLDNLAVPESPGVGGGK (A) CPS(0.99)LDNLAVPES(0.0)PGVGGGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2D 600227.3 6 26 17.1 1042.08 HUMAN 1 -3.5381 -9.9766 FLKSTQKSPATAPKP-p Q07960;S223-p FLKSTQKSPATAPKP 0.582849044638515 0.470537615437731 -0.13 0.175666666666667 4.3132226573321 4.36415880663654 -0.13 0.175666666666667 0.370405762304434 0.366086841758225 -0.976548606945442 0.985951355108718 Q07960 ARHGAP1 Q07960.S223.p_ARHGAP1 Q07960_S223s _1_1_223_223 Q07960 Q07960 Rho GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6354.6354.3 10.77 9.31 1.422 4 1 1 0 628.3583 1803.0943 S223s TMT10 219 (K) STQKsPATAPK (P) S(0.0)T(0.0)QKS(0.99)PAT(0.0)APK K:TMT10,s:Phosphorylated S ARHGAP1 50491.8 4 7 951.1 196.28 HUMAN 1 -4.3132 4.3642 FLKTDSDSDLQLYKE-p Q01433;S192-p FLKTDSDSDLQLYKE 0.355887907660121 0.0263721628487168 -0.315 0.399333333333333 8.34060884961296 21.4374665789399 -0.315 0.399333333333333 0.146534239609558 0.00718213132806204 -1.69420164225627 4.19017841389274 Q01433 AMPD2 Q01433.S192.p_AMPD2 Q01433_S192s _1_1_192_192 Q01433 Q01433|Q01433-4|Q01433-2|Q01433-5 AMP deaminase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20394.20394.4 13.94 11.21 1.104 4 1 1 0 778.6707 3031.7122 S192s TMT10 181 (R) AKQDFLKTDSDsDLQLYK (E) AKQDFLKT(0.0)DS(0.0)DS(0.99)DLQLY(0.0)K K:TMT10,s:Phosphorylated S AMPD2 101484.8 4 5 1735.1 118.63 HUMAN 1 -8.3406 21.4375 FLLDRRNSPMAQTPP-p Q13542;S65-p FLLDRRNSPMAQTPP 0.0335987102927368 0.0102221069934532 -0.669666666666667 -0.403 34.2958567164536 27.9519069032023 -0.669666666666667 -0.403 0.000371889852607689 0.00160254159112339 -7.8533807458417 -5.82398077624073 Q13542 EIF4EBP2 Q13542.S65.p_EIF4EBP2 Q13542_S65s _1_1_65_65 Q13542 Q13542 Eukaryotic translation initiation factor 4E-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27319.27319.5 21.28 14.82 2.172 6 1 1 0 1120.7886 5519.8731 S65s TMT10 64 (R) NsPMAQTPPCHLPNIPGVTSPGTLIEDSKVEVNNLNNLNNHDRK (H) NS(0.99)PMAQT(0.0)PPCHLPNIPGVT(0.0)S(0.0)PGT(0.0)LIEDS(0.0)KVEVNNLNNLNNHDRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EIF4EBP2 13053.3 8 2 1092.1 178.83 HUMAN 1 -34.2959 -27.9519 FLLKSDGSFIGYKER-p P31751;S34-p FLLKSDGSFIGYKER 0.0138805658480097 0.000952253650599092 -1.757 -1.684 45.1410687501805 56.3668192912446 -1.757 -1.684 3.06121001142024e-05 2.30843723515864e-06 -12.7388496303549 -20.6455247404942 P31751 AKT2 P31751.S34.p_AKT2 P31751_S34s _1_1_34_34 P31751 P31751|P31751-2 RAC-beta serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16743.16743.2 12.75 12.75 3.71 3 1 1 0 756.3815 1431.7884 S34s TMT10 31 (K) SDGsFIGYK (E) S(0.0)DGS(0.99)FIGY(0.0)K K:TMT10,s:Phosphorylated S AKT2 56167.2 2 8 1794.2 114.3 HUMAN 1 -45.1411 -56.3668 FLMECRNSPVTKTPP-p Q13541;S65-p FLMECRNSPVTKTPP 0.233628206047255 0.00518800786597606 -0.180333333333333 -0.582666666666667 12.1055350394449 33.237073834452 -0.180333333333333 -0.582666666666667 0.061580965830233 0.000474561625095317 -2.35106763221339 -7.46720904276678 Q13541 EIF4EBP1 Q13541.S65.p_EIF4EBP1 Q13541_S65s _1_1_65_65 Q13541 Q13541 Eukaryotic translation initiation factor 4E-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14539.14539.4 14.58 10.86 1.86 3 1 1 0 618.573 2391.3041 S65s TMT10 58 (K) FLMECRNsPVTKTPPR (D) FLMECRNS(0.99)PVT(0.0)KT(0.0)PPR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EIF4EBP1 12693.9 26 4 227.1 424.6 HUMAN 1 -12.1055 -33.2371 FLMLFEGSPSGKKRP-p Q9UPN4-2;S105-p FLMLFEGSPSGKKRP 0.810690999381857 0.00815813217337322 0.038 -0.523666666666667 1.75072011999696 29.7484937826156 0.038 -0.523666666666667 0.668233106139946 0.00105962115859934 0.452861112362778 -6.34601774498744 Q9UPN4 CEP131 Q9UPN4.2.S105.p_CEP131 Q9UPN4-2_S105s _1_1_105_105 Q9UPN4-2 Q9UPN4|Q9UPN4-2|I3L2J8|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31629.31629.5 19.99 16.21 3.204 6 1 1 0 595.8993 2895.4963 S105s TMT10 87 (R) SGSPRPTEPTDFLMLFEGsPSGK (K) S(0.0)GS(0.0)PRPT(0.0)EPT(0.0)DFLMLFEGS(0.99)PS(0.0)GK K:TMT10,s:Phosphorylated S CEP131 122301.7 8 6 359.1 345.98 HUMAN 1 1.7507 -29.7485 FLNPSLMSPECLPTT-p Q8TC44;S398-p FLNPSLMSPECLPTT 0.985606509431769 0.0107507387564347 0.003 0.403666666666667 0.127046541482942 27.5972508299134 0.00299999999999999 0.403666666666667 0.97117019571173 0.00173890123934689 0.0378424330192935 5.72497800290253 Q8TC44 POC1B Q8TC44.S398.p_POC1B Q8TC44_S398s _1_1_398_398 Q8TC44 Q8TC44|Q8TC44-2|Q8IU52 POC1 centriolar protein homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28688.28688.5 24.55 22.63 1.745 7 1 1 0 805.6014 3944.0099 S398s TMT10 379 (R) TLPDKGEEACGYFLNPSLMsPECLPTTTK (K) T(0.0)LPDKGEEACGY(0.0)FLNPS(0.0)LMS(0.99)PECLPT(0.0)T(0.0)T(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S POC1B 54237.4 3 4 2658.1 74.93 HUMAN 1 0.127 27.5973 FLQAQAASQENLEQF-p E7ESJ3;S1523-p FLQAQAASQENLEQF 0.903322133020513 0.223217433693005 -0.0236666666666667 0.144333333333333 0.866900337174031 8.57831439633741 -0.0236666666666667 0.144333333333333 0.819049154399008 0.138729416736915 -0.240150263925591 1.73477396331617 E7ESJ3 NotFound E7ESJ3.S1523.p_NotFound E7ESJ3_S1523s _1_1_1523_1523 E7ESJ3 E7ESJ3|Q9UPS8-3|Q9UPS8-2 Ankyrin repeat domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29239.29239.4 17 17 8.591 2 1 1 0 949.4711 3714.895 S1523s TMT10 1512 (K) EVNLFLQAQAAsQENLEQFRENNFASMK (S) EVNLFLQAQAAS(0.99)QENLEQFRENNFAS(0.0)MK K:TMT10,s:Phosphorylated S ANKRD26 199524.4 2 11 812.1 221.02 HUMAN 1 -0.8669 8.5783 FLQARHGSVSADEAA-p Q9NWW5;S31-p FLQARHGSVSADEAA 0.550983208393473 0.111133693501358 -0.106 0.173333333333333 4.77735447532946 12.5967157004474 -0.106 0.173333333333333 0.33286225611254 0.0549956614684193 -1.06309459656427 2.43735683800989 Q9NWW5 CLN6 Q9NWW5.S31.p_CLN6 Q9NWW5_S31s _1_1_31_31 Q9NWW5 Q9NWW5|H3BUT1|A0A1B0GUD2|H3BUV4|A0A0S2Z5D0|A0A1B0GTV3|H3BNF1|A0A1B0GW73 Ceroid-lipofuscinosis neuronal protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4196.4196.2 13.97 13.97 2.142 2 1 1 0 704.8253 1328.6756 S31s TMT10 29 (R) HGsVSADEAAR (T) HGS(0.99)VS(0.0)ADEAAR s:Phosphorylated S CLN6 36032.6 2 2 4501.1 30.64 HUMAN 1 -4.7774 12.5967 FLQEHEETPPSKSII-p H3BS01;T114-p FLQEHEETPPSKSII 0.998180995519267 0.261823729556559 -0.000333333333333348 0.119333333333333 0.0143231266717856 7.66605799927062 -0.000333333333333346 0.119333333333333 0.996707410704122 0.171156816508154 -0.00432069621495563 1.57669327263894 H3BS01 NotFound H3BS01.T114.p_NotFound H3BS01_T114t _1_1_114_114 H3BS01 H3BS01|Q9Y2V0|Q9Y2V0-2 Uncharacterized protein C15orf41 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13230.13230.3 19.15 19.15 5.764 2 1 1 0 660.6685 1900.0217 T114t TMT10 107 (R) FLQEHEEtPPSK (S) FLQEHEET(0.99)PPS(0.0)K K:TMT10,t:Phosphorylated T C15orf41 33490.8 2 1 5455.1 19.15 HUMAN 1 -0.0143 7.6661 FLQIFPLSPDPRWQS-p Q8N201;S1363-p FLQIFPLSPDPRWQS 0.937661199685327 0.225592060600986 -0.0146666666666667 0.24 0.544434076555544 8.51786577064484 -0.0146666666666667 0.24 0.882178750203281 0.140673866009566 -0.155346358976459 1.72431583448918 Q8N201 INTS1 Q8N201.S1363.p_INTS1 Q8N201_S1363s_1_1_1363_1363 Q8N201 Q8N201 Integrator complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.37256.37256.3 28.46 23.32 99 1 1 1 0 951.4814 2756.4531 M1355m S1363s TMT10 1345 (R) VLGPEDDLAGmFLQIFPLsPDPR (W) VLGPEDDLAGM(1.0)FLQIFPLS(1.0)PDPR m:Oxidized methionine,s:Phosphorylated S INTS1 246518.1 1 7 604.1 262.74 HUMAN 1 -0.5444 8.5179 FLQLSTGSVDKNKNK-p O95628-9;S258-p FLQLSTGSVDKNKNK 0.346881752877004 0.00464985793747891 -0.223333333333333 -0.616666666666667 8.54643381896817 34.1204892425758 -0.223333333333333 -0.616666666666667 0.139751545079692 0.000387214021927475 -1.72984658488372 -7.77598134982421 O95628 CNOT4 O95628.9.S258.p_CNOT4 O95628-9_S258s _1_1_258_258 O95628-9 O95628-6|O95628-10|O95628-9|O95628-7|O95628-4|O95628-8|O95628-2|O95628-3|O95628-5 Isoform 9 of CCR4-NOT transcription complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25288.25288.4 12.08 12.08 1.198 3 1 1 0 661.3683 2562.4858 S258s TMT10 247 (K) LNPNFLQLSTGsVDKNK (N) LNPNFLQLS(0.0)T(0.0)GS(0.99)VDKNK K:TMT10,s:Phosphorylated S CNOT4 78491.8 3 5 1032.1 185.91 HUMAN 1 -8.5464 -34.1205 FLQRVNASPAGRRKP-p Q8N554;S160-p FLQRVNASPAGRRKP 0.477403778940958 0.325029750975206 0.118 0.105 5.91011462132834 6.45784155332226 0.118 0.105 0.256441635417312 0.226055899051048 1.26853467237496 1.365387543419 Q8N554 ZNF276 Q8N554.S160.p_ZNF276 Q8N554_S160s _1_1_160_160 Q8N554 Q8N554|Q8N554-2|H3BTK0|H3BTT0|H3BPT7 Zinc finger protein 276 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4919.4919.2 11.32 7.45 99 1 1 1 0 540.7741 1000.5737 S160s TMT10 157 (R) VNAsPAGR (R) VNAS(1.0)PAGR s:Phosphorylated S ZNF276 68758.2 1 2 3532.1 48.89 HUMAN 1 5.9101 6.4578 FLRGIMESPIVRSLA-p A0A0C4DH75;S87-p FLRGIMESPIVRSLA 0.872072336166795 0.0244159165859423 -0.0263333333333333 -0.308 1.16366798741893 21.9586439501455 -0.0263333333333334 -0.308 0.764950268242178 0.00636994386271889 -0.314443532388243 -4.30793417057426 A0A0C4DH75 MPP2 A0A0C4DH75.S87.p_MPP2 A0A0C4DH75_S87s _1_1_87_87 A0A0C4DH75 Q14168-4|A0A0C4DH75|D3DX49|A0A0D9SFF8|Q14168-3|A0A0A0MRU0|Q14168-2|D3DX48|Q14168-6|B4DZ84 MAGUK p55 subfamily member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17200.17200.2 11.54 8.39 99 1 1 1 0 655.8406 1230.7078 S87s TMT10 83 (R) GIMEsPIVR (S) GIMES(1.0)PIVR s:Phosphorylated S MPP2 67148.4 1 1 4585.1 29.22 HUMAN 1 -1.1637 -21.9586 FLRISTASGDGRHYC-p Q5JWF2;S995-p FLRISTASGDGRHYC 0.118403246417576 0.209936951098536 0.286666666666667 0.327333333333333 19.2772562968034 8.91861592000032 0.286666666666667 0.327333333333333 0.0118106655180185 0.128273932166495 3.72552987141745 1.79363599662888 Q5JWF2 GNAS Q5JWF2.S995.p_GNAS Q5JWF2_S995s _1_1_995_995 Q5JWF2 P63092-2|P63092-3|A0A0A0MR13|Q5JWF2|Q5JWF2-2|P63092-4 Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5669.5669.2 11.96 7.73 2.085 3 1 1 0 586.7791 1092.5847 S995s TMT10 991 (R) ISTAsGDGR (H) IS(0.0)T(0.0)AS(0.99)GDGR s:Phosphorylated S GNAS 111764.2 3 3 3854.1 41.67 HUMAN 1 19.2773 8.9186 FLRLGMLSPEGTCKA-p P49327;S207-p FLRLGMLSPEGTCKA 0.290027496028783 0.0247184382771524 -0.165666666666667 -0.344666666666667 10.1347155540103 21.8734131417555 -0.165666666666667 -0.344666666666667 0.0969456762867302 0.00649618950935192 -2.00512518108707 -4.28854061538912 P49327 FASN P49327.S207.p_FASN P49327_S207s _1_1_207_207 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20748.20748.2 13.97 13.97 2.615 2 1 1 0 865.9354 1650.8959 S207s TMT10 203 (R) LGMLsPEGTCK (A) LGMLS(0.99)PEGT(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FASN 276046.1 8 3 175.1 481.87 HUMAN 1 -10.1347 -21.8734 FLRMCESTELNMTFH-p P51674;T205-p FLRMCESTELNMTFH 0.373228695696441 0.184537258531495 0.305 0.213666666666667 7.93402560031795 9.64663176439909 0.305 0.213666666666667 0.16091533731851 0.108476789577484 1.6237136869761 1.91963269834873 P51674 GPM6A P51674.T205.p_GPM6A P51674_S204sT205tT210t_3_3_204_210 P51674 P51674|P51674-2|P51674-3 Neuronal membrane glycoprotein M6-a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31779.31809.5 7.54 4.75 1.368 6 3 3 0 1043.4835 4972.5298 S204s T205t T210t N238n Hydrogen 201 (R) MCEstELNMtFHLFIVALAGAGAAVIAMVHYLMVLSAnWAYVK (D) MCES(0.99)T(0.99)ELN(0.0)MT(0.99)FHLFIVALAGAGAAVIAMVHY(0.0)LMVLS(0.0)AN(0.99)WAY(0.0)VK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated GPM6A 31950.7 1 1 7135.1 7.54 HUMAN 1 7.934 9.6466 FLRQLRASHLGNELE-p O14523;S296-p FLRQLRASHLGNELE 0.987481982540924 0.843958934639422 -0.00266666666666667 -0.0233333333333333 0.110560595114635 1.03430238494274 -0.00266666666666667 -0.0233333333333333 0.974863792426781 0.788079011837337 -0.0329919249414209 -0.282432875379361 O14523 C2CD2L O14523.S296.p_C2CD2L O14523_S296s _1_1_296_296 O14523 O14523-2|E9PK05 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24784.24784.4 21.89 21.15 3.873 2 1 1 0 1002.7329 3927.9403 S296s TMT10 292 (R) QLRAsHLGNELEGTEELCCVAELDNPMQQK (W) Q(0.0)LRAS(0.99)HLGN(0.0)ELEGT(0.0)EELCCVAELDN(0.0)PM(0.0)QQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C2CD2L 76636.4 3 2 411.1 322.51 HUMAN 1 -0.1106 -1.0343 FLRTHVDSHGHNVFK-p P49736;S209-p FLRTHVDSHGHNVFK 0.582330070632346 0.0684465700412352 -0.073 -0.241666666666667 4.32322377259758 15.4939800962483 -0.073 -0.241666666666667 0.369553757790192 0.0282229229667718 -0.978431543005846 -2.96960464014383 P49736 MCM2 P49736.S209.p_MCM2 P49736_S209s _1_1_209_209 P49736 P49736 DNA replication licensing factor MCM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5995.6013.4 13.38 10.58 3.798 2 1 1 0 479.7457 1835.9917 S209s TMT10 205 (R) THVDsHGHNVFK (E) T(0.0)HVDS(0.99)HGHNVFK K:TMT10,s:Phosphorylated S MCM2 102579 2 8 259.1 397.63 HUMAN 1 -4.3232 -15.494 FLSGSPASPMGDILQ-p Q14980;S203-p FLSGSPASPMGDILQ 0.635097827088048 0.120426568919066 0.0663333333333333 0.163666666666667 3.67548250928489 12.1212553490469 0.0663333333333333 0.163666666666667 0.428994524497796 0.0613584619949281 0.854566207851265 2.35267264990218 Q14980 NUMA1 Q14980.S203.p_NUMA1 Q14980_S203s _1_1_203_203 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-3|Q14980-4|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32602.32602.3 26.28 26.28 1.605 8 1 1 0 1174.2225 3440.6776 S203s TMT10 187 (K) VASSSSGNNFLSGSPAsPMGDILQTPQFQMR (R) VAS(0.0)S(0.0)S(0.0)S(0.0)GNNFLS(0.0)GS(0.0)PAS(0.99)PMGDILQT(0.0)PQFQMR s:Phosphorylated S NUMA1 239339.3 20 3 31.1 900.97 HUMAN 1 3.6755 12.1213 FLSKHFRSSENVLDE-p O60307;S134-p FLSKHFRSSENVLDE 0.52789938717846 0.390068961985042 0.163333333333333 0.091 5.13384450228488 5.43711655277237 0.163333333333333 0.091 0.306630640214053 0.285948843704129 1.12853018687295 1.18333587096313 O60307 MAST3 O60307.S134.p_MAST3 O60307_S134s _1_1_134_134 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7680.7680.4 10.9 10.9 1.101 3 1 1 0 596.0356 2301.1533 S134s TMT10 131 (K) HFRsSENVLDEEGGRSPR (L) HFRS(0.99)S(0.0)ENVLDEEGGRS(0.0)PR s:Phosphorylated S MAST3 143933.5 2 23 121.3 549.41 HUMAN 1 5.1338 5.4371 FLSLHAESDGEGALQ-p Q9H7N4;S453-p FLSLHAESDGEGALQ 0.317067114607464 0.0613425841596815 0.154 0.32 9.34120892799504 16.1429106484034 0.154 0.32 0.116380202145158 0.0243057448826138 1.8674455086721 3.09346884885131 Q9H7N4 SCAF1 Q9H7N4.S453.p_SCAF1 Q9H7N4_S453s _1_1_453_453 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27434.27434.5 32.62 27.6 4.409 3 1 1 0 802.9731 3930.8831 S453s TMT10 440 (R) APEGDDFLSLHAEsDGEGALQVDLGEPAPAPPAADSR (W) APEGDDFLS(0.0)LHAES(0.99)DGEGALQVDLGEPAPAPPAADS(0.0)R s:Phosphorylated S SCAF1 139895 5 5 76.1 647.25 HUMAN 1 9.3412 16.1429 FLSNANPSLLERHCA-p P51398;S389-p FLSNANPSLLERHCA 0.389947223267986 0.0944333651596507 0.127333333333333 0.225666666666667 7.56682146491405 13.5546257322689 0.127333333333333 0.225666666666667 0.17511278435037 0.0441100374777111 1.55991203900655 2.60999861839806 P51398 DAP3 P51398.S389.p_DAP3 P51398_S389s _1_1_389_389 P51398 P51398|P51398-3|P51398-2 28S ribosomal protein S29, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.32379.32379.3 18.2 14.72 4.462 2 1 1 0 675.6921 1945.0956 S389s TMT10 379 (K) ELLFLSNANPsLLER (H) ELLFLS(0.0)NANPS(0.99)LLER s:Phosphorylated S DAP3 45907.9 1 2 3841.1 41.87 HUMAN 1 7.5668 13.5546 FLSPDKLSLLEKLLP-p P31689;S340-p FLSPDKLSLLEKLLP 0.0838766483900984 0.00447115521927803 -0.379 -0.591 23.0090265667142 34.5019305414721 -0.379 -0.591 0.00500146625927975 0.000354655701358522 -4.55656157124523 -7.91264526381355 P31689 DNAJA1 P31689.S340.p_DNAJA1 P31689_S340s _1_1_340_340 P31689 P31689 DnaJ homolog subfamily A member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.32086.32086.3 12.65 12.65 2.252 2 1 1 0 972.2063 2834.6271 S340s TMT10 326 (K) VNFPENGFLSPDKLsLLEK (L) VNFPENGFLS(0.0)PDKLS(0.99)LLEK K:TMT10,s:Phosphorylated S DNAJA1 45609.1 2 5 1959.1 105.16 HUMAN 1 -23.009 -34.5019 FLSPGSRSPKFKSSK-p Q5UIP0;S2265-p FLSPGSRSPKFKSSK 0.677849654437065 0.000952253650599092 -0.071 -1.40733333333333 3.16076679658358 54.5711741458687 -0.071 -1.40733333333333 0.482973520011895 3.4904593568198e-06 -0.752880902465805 -19.1123958250948 Q5UIP0 RIF1 Q5UIP0.S2265.p_RIF1 Q5UIP0_S2265s _1_1_2265_2265 Q5UIP0 Q5UIP0 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12071.12071.3 9.43 3.77 1.386 3 1 1 0 557.6396 1590.9368 S2265s TMT10 2257 (K) GFLSPGSRsPK (F) GFLS(0.0)PGS(0.0)RS(0.99)PK K:TMT10,s:Phosphorylated S RIF1 276628.8 2 35 29.1 922.06 HUMAN 1 -3.1608 -54.5712 FLTHKQLSPEDSSSP-p Q96AY2-2;S111-p FLTHKQLSPEDSSSP 0.982109749042932 0.211231947206593 -0.00400000000000001 0.143666666666667 0.15570696686271 8.88362048848452 -0.00400000000000001 0.143666666666667 0.964782246812814 0.129311738689934 -0.046233787992681 1.78758317720765 Q96AY2 EME1 Q96AY2.2.S111.p_EME1 Q96AY2-2_S111s _1_1_111_111 Q96AY2-2 Q96AY2-2 Isoform 2 of Crossover junction endonuclease EME1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12568.12568.2 15.6 15.6 3.879 4 1 1 0 906.4632 1731.9529 S111s TMT10 109 (K) QLsPEDSSSPVK (S) QLS(0.99)PEDS(0.0)S(0.0)S(0.0)PVK K:TMT10,s:Phosphorylated S EME1 65747.5 3 5 1591.1 129.29 HUMAN 1 -0.1557 8.8836 FLVDQGYSFKVITKL-p P19447;S686-p FLVDQGYSFKVITKL 0.173549529236142 0.0123824029349833 -0.498 0.615 15.1584824639412 26.617721089659 -0.498 0.615 0.0304896018822815 0.00217885280037722 -2.90822788169594 5.45811894110448 P19447 ERCC3 P19447.S686.p_ERCC3 P19447_S686s _1_1_686_686 P19447 P19447 TFIIH basal transcription factor complex helicase XPB subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26423.26423.3 8.6 8.6 2.278 2 1 1 0 581.3038 1661.9303 S686s TMT10 679 (R) FLVDQGYsFK (V) FLVDQGY(0.0)S(0.99)FK K:TMT10,s:Phosphorylated S ERCC3 90074.9 1 2 5072.1 23.31 HUMAN 1 -15.1585 26.6177 FLVEKQKTLPKLPKS-p Q8NBF2;T590-p FLVEKQKTLPKLPKS 0.259311710735691 0.84629558466175 -0.174333333333333 -0.0443333333333333 11.1319588094175 1.01861883366176 -0.174333333333333 -0.0443333333333333 0.0770555844918201 0.790930123798282 -2.17924368178603 -0.278514765445504 Q8NBF2 NHLRC2 Q8NBF2.T590.p_NHLRC2 Q8NBF2_T590t _1_1_590_590 Q8NBF2 Q8NBF2|Q8NBF2-2 NHL repeat-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15109.15109.4 9.15 9.15 99 1 1 1 0 513.0807 1969.3344 T590t TMT10 588 (K) QKtLPKLPK (S) QKT(1.0)LPKLPK K:TMT10,t:Phosphorylated T NHLRC2 80297.9 1 2 2930.1 65.69 HUMAN 1 -11.132 -1.0186 FLVIVDGSPKNDDGH-p Q9H116;S613-p FLVIVDGSPKNDDGH 0.894795428292416 0.390140314400169 0.023 0.128 0.944716868680145 5.4355826214863 0.023 0.128 0.804504195202823 0.286049858883107 0.259953163629083 1.18305875812206 Q9H116 GZF1 Q9H116.S613.p_GZF1 Q9H116_S613s _1_1_613_613 Q9H116 Q9H116|Q9H116-4 GDNF-inducible zinc finger protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27973.27973.2 15.01 15.01 9.415 2 1 1 0 850.4763 1619.9773 S613s TMT10 605 (K) SFLVIVDGsPK (N) S(0.0)FLVIVDGS(0.99)PK K:TMT10,s:Phosphorylated S GZF1 82145 4 4 1980.1 104.43 HUMAN 1 0.9447 5.4356 FLYKKLPSVEGLHAI-p Q9UHA4;S15-p FLYKKLPSVEGLHAI 0.590863718677233 0.504125030652971 0.075 0.0676666666666667 4.21049264863897 3.98530491944587 0.075 0.0676666666666667 0.379271959234146 0.399456514363168 0.95715763187953 0.91416517186344 Q9UHA4 LAMTOR3 Q9UHA4.S15.p_LAMTOR3 Q9UHA4_S15s _1_1_15_15 Q9UHA4 Q9UHA4|Q9UHA4-2 Ragulator complex protein LAMTOR3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24893.24893.5 21.4 21.4 21.402 2 1 1 0 639.9761 3115.881 S15s TMT10 12 (K) KLPsVEGLHAIVVSDRDGVPVIK (V) KLPS(0.99)VEGLHAIVVS(0.0)DRDGVPVIK K:TMT10,s:Phosphorylated S LAMTOR3 13679.5 2 1 5243.1 21.4 HUMAN 1 4.2105 3.9853 FMPLIDDSDDEIEEF-p Q96K49;S469-p FMPLIDDSDDEIEEF 0.820921349633823 0.258969354682978 0.0593333333333333 0.148666666666667 1.64764053320151 7.7297298094818 0.0593333333333333 0.148666666666667 0.684283308749365 0.168665795529927 0.429273974832527 1.58775251759398 Q96K49 TMEM87B Q96K49.S469.p_TMEM87B Q96K49_S469s _1_1_469_469 Q96K49 Q96K49|Q96K49-2 Transmembrane protein 87B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.37377.37377.3 22.75 22.61 3.519 5 1 1 0 1297.2739 3809.8429 S469s TMT10 460 (R) YAFMPLIDDsDDEIEEFMVTSENLTEGIK (L) Y(0.0)AFMPLIDDS(0.99)DDEIEEFMVT(0.0)S(0.0)ENLT(0.0)EGIK K:TMT10,s:Phosphorylated S TMEM87B 64219.7 26 1 2468.1 82.08 HUMAN 1 1.6476 7.7297 FMTPRKLSFDFQ___-p P23381-2;S426-p FMTPRKLSFDFQ___ 0.351928236415973 0.35232300272229 -0.128333333333333 0.110333333333333 8.42268542119402 6.00666184769923 -0.128333333333333 0.110333333333333 0.143790918499019 0.250803628426727 -1.70841788402942 1.28544414615674 P23381 WARS P23381.2.S426.p_WARS P23381-2_S426s _1_1_426_426 P23381-2 P23381|P23381-2 Isoform 2 of Tryptophan--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24567.24775.2 7.68 5.55 99 1 1 1 0 711.8754 1342.7771 S426s TMT10 424 (R) KLsFDFQ (-) KLS(1.0)FDFQ K:TMT10,s:Phosphorylated S WARS 49193 2 2 5744.1 16.61 HUMAN 1 -8.4227 6.0067 FMTQQQMSPLSREGI-p O14578-4;S44-p FMTQQQMSPLSREGI 0.169558691409461 0.00897185421594355 -0.280666666666667 -0.436666666666667 15.3741675315005 28.9995781562216 -0.280666666666667 -0.436666666666667 0.0290123726313126 0.00125904770108579 -2.94892564212957 -6.12414057021917 O14578 CIT O14578.4.S44.p_CIT O14578-4_S44s _1_1_44_44 O14578-4 O14578-4|O14578-2 Isoform 4 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.33628.33628.4 19.89 19.89 2.377 3 1 1 0 784.1579 3053.6469 S44s TMT10 27 (R) LNLFFQGKPPFMTQQQMsPLSR (E) LNLFFQGKPPFMT(0.0)QQQMS(0.99)PLS(0.0)R K:TMT10,s:Phosphorylated S CIT 238656.7 2 3 366.1 342.11 HUMAN 1 -15.3742 -28.9996 FNEEGALSVLQQFKE-p O43390;S78-p FNEEGALSVLQQFKE 0.176539100856238 0.0194419553353646 -0.466333333333333 0.633 14.9366637530634 23.5021406019591 -0.466333333333333 0.633 0.0320873332448422 0.00446463479714271 -2.86658082557938 4.66876915812784 O43390 HNRNPR O43390.S78.p_HNRNPR O43390_S78s _1_1_78_78 O43390 O43390-2|O43390-3 Heterogeneous nuclear ribonucleoprotein R HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.35616.35616.3 10.8 10.8 99 1 1 1 0 972.8473 2836.5609 S78s TMT10 64 (R) AIDALREFNEEGALsVLQQFK (E) AIDALREFNEEGALS(1.0)VLQQFK K:TMT10,s:Phosphorylated S HNRNPR 71227 1 2 1376.2 148.68 HUMAN 1 -14.9367 23.5021 FNEPLDFSQKGLALV-p Q92766;S903-p FNEPLDFSQKGLALV 0.483303000164529 0.0497196164735239 -0.101 0.23 5.81626008526291 17.4294501816886 -0.101 0.23 0.262043862023294 0.0180740292936132 -1.25176181825407 3.34507343293546 Q92766 RREB1 Q92766.S903.p_RREB1 Q92766_S903s _1_1_903_903 Q92766 Q92766-2|Q92766-3|Q92766-5 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.33244.33244.4 13.78 13.78 7.226 3 1 1 0 695.5938 2699.3969 S903s TMT10 886 (K) LEPASSFAVDFNEPLDFsQK (G) LEPAS(0.0)S(0.0)FAVDFNEPLDFS(0.99)QK K:TMT10,s:Phosphorylated S RREB1 184269.8 3 17 179.1 480.48 HUMAN 1 -5.8163 17.4295 FNGGHSPTHSPEKIL-p Q9Y5K6;T512-p FNGGHSPTHSPEKIL 0.549625433380482 0.777919142209962 0.150333333333333 -0.073 4.79951713200371 1.50966396845667 0.150333333333333 -0.073 0.331167940165978 0.706372207078079 1.06718717565136 -0.397208501726723 Q9Y5K6 CD2AP Q9Y5K6.T512.p_CD2AP Q9Y5K6_T512t _1_1_512_512 Q9Y5K6 Q9Y5K6 CD2-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7892.7892.4 9.64 9.64 1.162 3 1 1 0 589.8046 2276.23 T512t TMT10 501 (R) LPGRFNGGHSPtHSPEK (I) LPGRFNGGHS(0.0)PT(0.99)HS(0.0)PEK K:TMT10,t:Phosphorylated T CD2AP 71678 1 8 413.1 321.76 HUMAN 1 4.7995 -1.5097 FNGQMERSPRRTHHW-p Q96DN6;S906-p FNGQMERSPRRTHHW 0.898261213438234 0.174887432749875 0.0233333333333333 0.136666666666667 0.913279900347525 9.95838014685821 0.0233333333333333 0.136666666666667 0.810348831031163 0.100962939244507 0.251981874012477 1.97368615488858 Q96DN6 MBD6 Q96DN6.S906.p_MBD6 Q96DN6_S906s_1_1_906_906 Q96DN6 Q96DN6 Methyl-CpG-binding domain protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6909.6909.3 10.17 10.17 99 1 1 1 0 549.2506 1564.7852 N900n S906s TMT10 897 (R) GGFnGQMERsPR (R) GGFN(1.0)GQMERS(1.0)PR n:Deamidated,s:Phosphorylated S MBD6 101883.9 1 4 2682.1 74.08 HUMAN 1 0.9133 9.9584 FNHSDDFTPISTVQK-p Q6R327-3;T1148-p FNHSDDFTPISTVQK 0.269665314766001 0.126359264297097 -0.342666666666667 0.220666666666667 10.7848981600459 11.8451774574051 -0.342666666666667 0.220666666666667 0.0834661120447156 0.0653856212189482 -2.11846650420982 2.30377107320507 Q6R327 RICTOR Q6R327.3.T1148.p_RICTOR Q6R327-3_T1148t _1_1_1148_1148 Q6R327-3 Q6R327-3 Isoform 3 of Rapamycin-insensitive companion of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22609.22609.4 12.3 8.02 1.1 7 1 1 0 722.5952 2807.3937 T1148t Hydrogen 1133 (R) TLTEPSVDFNHSDDFtPISTVQK (T) T(0.0)LT(0.0)EPS(0.0)VDFNHS(0.0)DDFT(0.99)PIS(0.0)T(0.0)VQK K:TMT10-Lys-Only,t:Phosphorylated T RICTOR 197118.3 1 6 452.1 308.36 HUMAN 1 -10.7849 11.8452 FNIIRKDSLPVCPVD-p J3KR24;S236-p FNIIRKDSLPVCPVD 0.94478758147709 0.0242095245205697 0.013 0.392666666666667 0.487066893472674 22.0205231062019 0.013 0.392666666666667 0.893909001679306 0.00627982713956932 0.13975381983792 4.3220480658086 J3KR24 NotFound J3KR24.S236.p_NotFound J3KR24_S236s _1_1_236_236 J3KR24 P41252|A0A0A0MSX9|J3KR24 Isoleucine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32046.32046.5 22.33 18.76 7.694 6 1 1 0 772.5844 3778.9275 S236s TMT10 234 (R) KDsLPVCPVDASGCFTTEVTDFAGQYVK (D) KDS(0.99)LPVCPVDAS(0.0)GCFT(0.0)T(0.0)EVT(0.0)DFAGQY(0.0)VK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S IARS 132902.3 4 1 2902.1 66.43 HUMAN 1 0.4871 22.0205 FNILNDFSPVEPNSS-p Q96DY7;S539-p FNILNDFSPVEPNSS 0.875798989065343 0.533782345423302 0.0456666666666667 0.330333333333333 1.12932093235614 3.6671296717773 0.0456666666666667 0.330333333333333 0.77102401780578 0.429820408739251 0.306009882785096 0.852805355197917 Q96DY7 MTBP Q96DY7.S539.p_MTBP Q96DY7_S539s_1_1_539_539 Q96DY7 Q96DY7 Mdm2-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.36813.36813.3 15.06 15.06 1.18 6 1 1 0 1225.2478 3592.7467 S539s N544n TMT10 531 (K) TFNILNDFsPVEPnSSSLMETNPLEWPER (H) T(0.0)FN(0.0)ILN(0.0)DFS(0.99)PVEPN(0.99)S(0.0)S(0.0)S(0.0)LMET(0.0)N(0.0)PLEWPER s:Phosphorylated S,n:Deamidated MTBP 103389.4 2 1 2629.1 76.23 HUMAN 1 1.1293 3.6671 FNINKRMSGSEKEPQ-p P86790;S368-p FNINKRMSGSEKEPQ 0.036022948076598 0.0013036590626876 -0.703333333333333 -0.974 33.4936485476358 46.9658498019749 -0.703333333333333 -0.974 0.000447337334087608 2.0110136563396e-05 -7.56963910849145 -13.7565244496335 P86790 CCZ1 P86790.S368.p_CCZ1 P86790_S368s _1_1_368_368 P86790 P86790 Vacuolar fusion protein CCZ1 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10209.10209.3 10.26 10.26 1.166 2 1 1 0 731.0568 2111.1886 S368s TMT10 366 (K) RMsGSEKEPQFK (F) RMS(0.99)GS(0.0)EKEPQFK K:TMT10,s:Phosphorylated S CCZ1B 56321.6 4 2 3644.1 46.18 HUMAN 1 -33.4936 -46.9658 FNINRVATQAVEDVL-p Q4G0N4;T328-p FNINRVATQAVEDVL 0.683123990240323 0.022092942519823 0.0756666666666667 0.724 3.1030767450034 22.6211117493036 0.0756666666666667 0.724 0.489431960051509 0.00546875950342949 0.741271703741333 4.46053590082629 Q4G0N4 NADK2 Q4G0N4.T328.p_NADK2 Q4G0N4_T328t _1_1_328_328 Q4G0N4 Q4G0N4|Q4G0N4-2|B7Z8V7|Q4G0N4-3|A0A0C4DGV3 NAD kinase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.35031.35031.3 19.82 19.82 99 1 1 1 0 670.3734 1929.1421 T328t TMT10 326 (R) VAtQAVEDVLNIAK (R) VAT(1.0)QAVEDVLNIAK K:TMT10,t:Phosphorylated T NADK2 50002.6 2 1 4093.1 37.79 HUMAN 1 3.1031 22.6211 FNISRAESLPLSSNL-p Q8N1W1-6;S535-p FNISRAESLPLSSNL 0.658930636205798 0.119814837185604 -0.0756666666666667 -0.197333333333333 3.39988563790367 12.1501175425063 -0.0756666666666667 -0.197333333333333 0.457100226206178 0.0609520400248376 -0.800526406158307 -2.3577960678744 Q8N1W1 ARHGEF28 Q8N1W1.6.S535.p_ARHGEF28 Q8N1W1-6_S535s _1_1_535_535 Q8N1W1-6 Q8N1W1-6|Q8N1W1-3 Isoform 6 of Rho guanine nucleotide exchange factor 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16982.16982.2 8.69 8.69 6.055 4 1 1 0 841.9348 1602.89 S535s Hydrogen 533 (R) AEsLPLSSNLQSK (E) AES(0.99)LPLS(0.0)S(0.0)NLQS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S ARHGEF28 196740.3 1 3 3005.1 63.48 HUMAN 1 -3.3999 -12.1501 FNKRHCRSFDFLEAL-p C9J069;S52-p FNKRHCRSFDFLEAL 0.945256167031154 0.631368420341411 -0.013 0.0843333333333334 0.480108974701115 2.71440492994826 -0.013 0.0843333333333334 0.895342299023392 0.535253489149564 -0.137851432845852 0.661694869838785 C9J069 C9orf172 C9J069.S52.p_C9orf172 C9J069_S52s _1_1_52_52 C9J069 C9J069 Uncharacterized protein C9orf172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36887.36887.3 20.32 18.24 9.109 3 1 1 0 1106.8666 3238.6179 S52s TMT10 52 (R) sFDFLEALDGPAMETLPEPPPPESAVPR (A) S(0.99)FDFLEALDGPAMET(0.0)LPEPPPPES(0.0)AVPR s:Phosphorylated S C9orf172 107960.6 2 2 430.1 316.49 HUMAN 1 -0.4801 2.7144 FNKSSATSGDIWPGL-p Q9NYF8;S209-p FNKSSATSGDIWPGL 0.219716131376416 0.0435752908340124 0.19 0.546 12.666587438483 18.22836109596 0.19 0.546 0.0541179399172419 0.0150370931622469 2.45115773956623 3.50571342096268 Q9NYF8 BCLAF1 Q9NYF8.S209.p_BCLAF1 Q9NYF8_S209s _1_1_209_209 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23730.24328.3 16.46 16.46 1.123 7 1 1 0 797.3672 2310.12 S209s TMT10 205 (K) SSATsGDIWPGLSAYDNSPR (S) S(0.0)S(0.0)AT(0.0)S(0.99)GDIWPGLS(0.0)AY(0.0)DNS(0.0)PR s:Phosphorylated S BCLAF1 106234.3 2 6 10.1 1293.04 HUMAN 1 12.6666 18.2284 FNMASPESDFGINLK-p Q09666;S5555-p FNMASPESDFGINLK 0.179989525186209 0.762136347620724 0.316666666666667 -0.0416666666666666 14.6925278284162 1.63024520672088 0.316666666666667 -0.0416666666666666 0.0339427649860144 0.687029648583483 2.82098096666325 -0.425219441583706 Q09666 AHNAK Q09666.S5555.p_AHNAK Q09666_S5555s _1_1_5555_5555 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30857.30857.3 18.11 18.11 2.777 2 1 1 0 811.7359 2353.2262 S5555s TMT10 5545 (K) GPAFNMASPEsDFGINLK (G) GPAFNMAS(0.0)PES(0.99)DFGINLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 4 146 1.1 4313.36 HUMAN 1 14.6925 -1.6302 FNMKKLASDAGIFFT-p Q9NR46;S10-p FNMKKLASDAGIFFT 0.451823780329444 0.84730728917872 0.104 -0.033 6.36781587343603 1.01024201178124 0.104 -0.033 0.230790757530811 0.792457169358741 1.34983262136272 -0.276418295228215 Q9NR46 SH3GLB2 Q9NR46.S10.p_SH3GLB2 Q9NR46_S10s _1_1_10_10 Q9NR46 Q9NR46|B7ZC39|F8WFB9|G5E9J1 Endophilin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23470.23470.3 11.12 11.12 1.46 2 1 1 0 622.01 1784.0471 S10s TMT10 7 (K) KLAsDAGIFFTR (A) KLAS(0.99)DAGIFFT(0.0)R K:TMT10,s:Phosphorylated S SH3GLB2 44201.3 1 1 2345.1 87.15 HUMAN 1 6.3678 -1.0102 FNPRATFSEFAAKHA-p O14776;S748-p FNPRATFSEFAAKHA 0.2040437776167 0.892173292927516 0.344666666666667 -0.0223333333333333 13.3697236827345 0.696173448673871 0.344666666666667 -0.0223333333333333 0.0460285858062048 0.851888303005907 2.57790749748322 -0.195809874609326 O14776 TCERG1 O14776.S748.p_TCERG1 O14776_S748s _1_1_748_748 O14776 O14776|O14776-2|G3V220 Transcription elongation regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21933.21933.2 12.45 12.45 2.569 2 1 1 0 755.3967 1429.8091 S748s TMT10 745 (R) ATFsEFAAK (H) AT(0.0)FS(0.99)EFAAK K:TMT10,s:Phosphorylated S TCERG1 124127.1 1 3 1889.1 108.96 HUMAN 1 13.3697 -0.6962 FNQFSPISSPEPEDP-p Q92610;S145-p FNQFSPISSPEPEDP 0.418817558302796 0.00971111834999003 -0.151 0.418 6.97614253857274 28.3441786113096 -0.151 0.418 0.200625321703636 0.00146413842640704 -1.4568364408214 5.93500278940386 Q92610 ZNF592 Q92610.S145.p_ZNF592 Q92610_S145sS146s_2_2_145_146 Q92610 Q92610|H0YM74 Zinc finger protein 592 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29607.29607.5 16.57 16.57 1.428 6 2 2 0 943.4977 4553.4989 S145s S146s TMT10 122 (R) SFPGKLEPPKSEPLPTFNQFSPIssPEPEDPIK (D) S(0.0)FPGKLEPPKS(0.0)EPLPT(0.0)FNQFS(0.0)PIS(0.99)S(0.99)PEPEDPIK K:TMT10,s:Phosphorylated S ZNF592 140207.3 3 21 164.1 494.76 HUMAN 1 -6.9761 28.3442 FNRNADRSIERFSHN-p Q9H9A7;S348-p FNRNADRSIERFSHN 0.476784104106263 0.386255993477595 0.128 0.239 5.91979447811463 5.49213306991695 0.128 0.239 0.25587069701475 0.282349285460653 1.27026244342112 1.19326680463522 Q9H9A7 RMI1 Q9H9A7.S348.p_RMI1 Q9H9A7_S348sS353s_2_2_348_353 Q9H9A7 Q9H9A7 RecQ-mediated genome instability protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25189.25189.5 8.41 4.01 0 7 2 2 0 898.6094 4325.0907 S348s S353s N360n N361n N371n N372n Hydrogen 344 (R) NADRsIERFsHNPNTTnnFSLTCKNGNnnWSEK (N) N(0.0)ADRS(0.99)IERFS(0.99)HN(0.0)PN(0.0)T(0.0)T(0.0)N(0.99)N(0.99)FS(0.0)LT(0.0)CKN(0.25)GN(0.25)N(0.25)N(0.25)WS(0.0)EK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated RMI1 70713.7 1 7 2180.1 94.33 HUMAN 1 5.9198 5.4921 FNRPFPNSP______-p Q96H12;S274-p FNRPFPNSP______ 0.326502819643871 0.0178038368389318 -0.269 -0.516333333333333 9.10476184653953 24.101048560111 -0.269 -0.516333333333333 0.12289205748773 0.00388951225316452 -1.82649931055768 -4.8139154530207 Q96H12 MSANTD3 Q96H12.S274.p_MSANTD3 Q96H12_S274s _1_1_274_274 Q96H12 Q96H12 Myb/SANT-like DNA-binding domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26279.26279.3 16.88 16.88 8.535 3 1 1 0 690.661 1990.002 S274s TMT10 261 (K) EWPVSSFNRPFPNsP (-) EWPVS(0.0)S(0.0)FNRPFPNS(0.99)P s:Phosphorylated S MSANTD3 32704.9 1 1 5721.1 16.88 HUMAN 1 -9.1048 -24.101 FNSLPQYSPVTFDRK-p Q8WY36;S704-p FNSLPQYSPVTFDRK 0.897715354949602 0.085512394335663 0.024 -0.204 0.919727593415428 14.1347707427333 0.024 -0.204 0.809146650447875 0.0385942784373159 0.25361993508487 -2.71604798325901 Q8WY36 BBX Q8WY36.S704.p_BBX Q8WY36_S704s _1_1_704_704 Q8WY36 Q8WY36|Q8WY36-2|C9JA69 HMG box transcription factor BBX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19452.19518.5 14.53 14.53 3.384 4 1 1 0 539.698 2614.496 S704s TMT10 696 (K) KFNSLPQYsPVTFDRK (C) KFNS(0.0)LPQY(0.0)S(0.99)PVT(0.0)FDRK K:TMT10,s:Phosphorylated S BBX 106212.3 6 8 621.1 259.66 HUMAN 1 0.9197 -14.1348 FNSPRAGSPLCNSNL-p Q9NRY4;S975-p FNSPRAGSPLCNSNL 0.630414271538022 0.469730436815983 -0.0683333333333333 0.0726666666666667 3.7277627522627 4.3734741003131 -0.0683333333333333 0.0726666666666667 0.423861259966351 0.365302454233646 -0.864719863927327 0.987700610213536 Q9NRY4 ARHGAP35 Q9NRY4.S975.p_ARHGAP35 Q9NRY4_S975s _1_1_975_975 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.28737.28737.4 24.51 24.51 3.727 10 1 1 0 1106.7786 4344.123 S975s TMT10 973 (R) AGsPLCNSNLQDSEEDIEPSYSLFREDTSLPSLSK (D) AGS(0.99)PLCNS(0.0)NLQDS(0.0)EEDIEPS(0.0)Y(0.0)S(0.0)LFREDT(0.0)S(0.0)LPS(0.0)LS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARHGAP35 172051.4 14 5 247.1 410.47 HUMAN 1 -3.7278 4.3735 FNSPSPPTPEPGEGP-p A0MZ66-3;T537-p FNSPSPPTPEPGEGP 0.852198059300558 0.726111292802451 0.0293333333333333 -0.051 1.34522357755817 1.91271352836133 0.0293333333333333 -0.051 0.733630945659062 0.64376690589968 0.358364872608915 -0.489327953260284 A0MZ66 SHTN1 A0MZ66.3.T537.p_SHTN1 A0MZ66-3_T537t _1_1_537_537 A0MZ66-3 A0MZ66-3|A0MZ66-6|A0MZ66-5|A0MZ66-4|A0MZ66-8|A0MZ66-7 Isoform 3 of Shootin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16590.16590.3 17.24 17.24 2.288 4 1 1 0 959.1468 2795.4616 T537t TMT10 524 (K) KTLEAEFNSPSPPtPEPGEGPR (K) KT(0.0)LEAEFNS(0.0)PS(0.0)PPT(0.99)PEPGEGPR K:TMT10,t:Phosphorylated T SHTN1 74064.4 3 11 838.1 214.92 HUMAN 1 1.3452 -1.9127 FNSREVLSPLKTTSS-p Q8WVV4-1;S76-p FNSREVLSPLKTTSS 0.175114346915946 0.228838107933426 -0.234 -0.26 15.0747981858941 8.43670849186943 -0.234 -0.26 0.0310828033935307 0.14332737627026 -2.89249144314804 -1.71027285821612 Q8WVV4 POF1B Q8WVV4.1.S76.p_POF1B Q8WVV4-1_S76s _1_1_76_76 Q8WVV4-1 Q8WVV4-1|Q8WVV4-3 Isoform 1 of Protein POF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.29343.29343.3 14.91 10.87 1.91 2 1 1 0 850.8065 2470.4434 S76s TMT10 62 (K) VVQALDPFNSREVLsPLK (T) VVQALDPFNS(0.0)REVLS(0.99)PLK K:TMT10,s:Phosphorylated S POF1B 69550.4 4 2 2520.1 80.14 HUMAN 1 -15.0748 -8.4367 FNVINGGSHAGNKLA-p P06733;S157-p FNVINGGSHAGNKLA 0.665023985742642 0.609393078406307 0.0633333333333333 0.0493333333333334 3.31430029965216 2.92274964376833 0.0633333333333333 0.0493333333333334 0.46619753194933 0.510181886815917 0.783558217358744 0.704580287858939 P06733 ENO1 P06733.S157.p_ENO1 P06733_S157s _1_1_157_157 P06733 P06733|P06733-2 Alpha-enolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29096.29096.5 25.72 24.49 8.442 2 1 1 0 710.779 3469.8956 S157s TMT10 133 (R) HIADLAGNSEVILPVPAFNVINGGsHAGNK (L) HIADLAGNS(0.0)EVILPVPAFNVINGGS(0.99)HAGNK K:TMT10,s:Phosphorylated S ENO1 47510.4 3 7 623.1 259.34 HUMAN 1 3.3143 2.9227 FNVRGQVSEGGQLRS-p Q96L92;S62-p FNVRGQVSEGGQLRS 0.390243552379158 0.0158966018500546 0.182333333333333 -0.346666666666667 7.55548141935859 24.8552865941888 0.182333333333333 -0.346666666666667 0.175570626178573 0.00326942470943318 1.55793888577485 -5.00102358357228 Q96L92 SNX27 Q96L92.S62.p_SNX27 Q96L92_S62s _1_1_62_62 Q96L92 Q96L92|Q96L92-3 Sorting nexin-27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6609.6609.2 12.43 8.35 99 1 1 1 0 670.3315 1259.6905 S62s TMT10 59 (R) GQVsEGGQLR (S) GQVS(1.0)EGGQLR s:Phosphorylated S SNX27 61891.7 1 3 3679.1 45.49 HUMAN 1 7.5555 -24.8553 FPADEANSSPPLPGA-p A0A1B0GTU4;S169-p FPADEANSSPPLPGA 0.560423836734948 0.359454942145737 0.077 -0.0896666666666666 4.63634779590049 5.89562791405025 0.077 -0.0896666666666666 0.343846984840249 0.257298472883044 1.03697451346743 -1.26565198672314 A0A1B0GTU4 NotFound A0A1B0GTU4.S169.p_NotFound A0A1B0GTU4_S169sS170s_2_2_169_170 A0A1B0GTU4 P49023-2|P49023-4|A0A1B0GTU4|A0A1B0GU60|P49023-3|F5GZ78 Paxillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.35779.35779.5 13.69 13.69 0 6 2 2 0 1014.1036 4904.5672 N158n N168n S169s S170s Hydrogen 148 (R) LLLELNAVQHnPPGFPADEAnssPPLPGALSPLYGVPETNSPLGGK (A) LLLELN(0.33)AVQHN(0.33)PPGFPADEAN(0.33)S(0.99)S(0.99)PPLPGALS(0.0)PLY(0.0)GVPET(0.0)N(0.0)S(0.0)PLGGK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S PXN 117843.4 7 21 288.1 382.57 HUMAN 1 4.6363 -5.8956 FPALGEASSDDDLFQ-p Q641Q2;S1179-p FPALGEASSDDDLFQ 0.297330507583042 0.158409733807383 -0.164666666666667 -0.147666666666667 9.91108622196608 10.5259553140996 -0.164666666666667 -0.147666666666667 0.102068416657423 0.0885940322639717 -1.9662671518961 -2.07236548688696 Q641Q2 FAM21A Q641Q2.S1179.p_FAM21A Q641Q2_S1179sS1180s_2_2_1179_1180 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28037.28037.5 20.82 20.82 10.832 4 2 2 0 762.9905 3650.991 S1179s S1180s TMT10 1169 (K) SPMFPALGEAssDDDLFQSAKPKPAK (K) S(0.0)PMFPALGEAS(0.99)S(0.99)DDDLFQS(0.0)AKPKPAK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 8 73 12.1 1178.3 HUMAN 1 -9.9111 -10.526 FPAPYGPSPASRYVQ-p Q9Y6J9;S589-p FPAPYGPSPASRYVQ 0.668875450269392 0.12136157486968 0.0803333333333333 0.168 3.26699158286287 12.0773914729732 0.0803333333333333 0.168 0.471303691843445 0.0619813245162393 0.774138669153577 2.34489032674136 Q9Y6J9 TAF6L Q9Y6J9.S589.p_TAF6L Q9Y6J9_S589s _1_1_589_589 Q9Y6J9 Q9Y6J9 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27999.27999.3 19.13 19.13 1.662 4 1 1 0 706.0207 2036.0803 S589s TMT10 577 (R) LFQTAFPAPYGPsPASR (Y) LFQT(0.0)AFPAPY(0.0)GPS(0.99)PAS(0.0)R s:Phosphorylated S TAF6L 68383.7 2 3 2842.1 68.26 HUMAN 1 3.267 12.0774 FPCKVGTTPVSSPSQ-p Q6ZNJ1;T2009-p FPCKVGTTPVSSPSQ 0.308133105029726 0.382559884498192 0.179 -0.0876666666666667 9.55588081011559 5.54353462408205 0.179 -0.0876666666666667 0.11076738907922 0.279027197790808 1.90464398419785 -1.20253120965467 Q6ZNJ1 NBEAL2 Q6ZNJ1.T2009.p_NBEAL2 Q6ZNJ1_T2009t _1_1_2009_2009 Q6ZNJ1 Q6ZNJ1|Q6ZNJ1-3|Q6ZNJ1-2 Neurobeachin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11519.11519.4 18.62 18.15 1.115 7 1 1 0 782.6613 3047.6588 T2009t TMT10 2006 (K) VGTtPVSSPSQTPRPQPGPIPPHTQVR (N) VGT(0.0)T(0.99)PVS(0.0)S(0.0)PS(0.0)QT(0.0)PRPQPGPIPPHT(0.0)QVR t:Phosphorylated T NBEAL2 305591.9 5 6 1347.1 151.04 HUMAN 1 9.5559 -5.5435 FPDPPPLSPPVLGLH-p Q8NE71;S621-p FPDPPPLSPPVLGLH 0.167300432977981 0.0561678725393823 -0.689333333333333 0.220666666666667 15.5270307969996 16.6628134809255 -0.689333333333333 0.220666666666667 0.0280089559340221 0.0215634701475634 -2.97789309336416 3.1941410776641 Q8NE71 ABCF1 Q8NE71.S621.p_ABCF1 Q8NE71_S621s _1_1_621_621 Q8NE71 Q8NE71|Q8NE71-2 ATP-binding cassette sub-family F member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.35606.35606.4 20.76 16.28 5.678 4 1 1 0 859.4548 3354.8291 S621s TMT10 612 (R) FTFPDPPPLsPPVLGLHGVTFGYQGQK (P) FT(0.0)FPDPPPLS(0.99)PPVLGLHGVT(0.0)FGY(0.0)QGQK K:TMT10,s:Phosphorylated S ABCF1 96380.4 3 8 203.1 449.36 HUMAN 1 -15.527 16.6628 FPEAEALSPEQAAHY-p Q2NKX8;S14-p FPEAEALSPEQAAHY 0.932151691896397 0.0728218660073545 0.0156666666666667 -0.216666666666667 0.604471319110377 15.1152357829797 0.0156666666666667 -0.216666666666667 0.870067342764604 0.0307947314917192 0.17149248790811 -2.89818277819315 Q2NKX8 ERCC6L Q2NKX8.S14.p_ERCC6L Q2NKX8_S14s _1_1_14_14 Q2NKX8 Q2NKX8 DNA excision repair protein ERCC-6-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19306.19306.3 22.2 18.12 11.781 2 1 1 0 798.7307 2314.2141 S14s TMT10 6 (R) RFPEAEALsPEQAAHYLR (Y) RFPEAEALS(0.99)PEQAAHY(0.0)LR s:Phosphorylated S ERCC6L 142070.4 4 1 422.1 320.12 HUMAN 1 0.6045 -15.1152 FPEKHWLSLEKLPQL-p Q8WW22-2;S365-p FPEKHWLSLEKLPQL 0.193523334654365 0.0180436471065125 -0.823333333333333 0.391333333333333 13.9241416245172 24.0120206233314 -0.823333333333333 0.391333333333333 0.0405122008883775 0.0039700679284253 -2.67900130493962 4.7921504109168 Q8WW22 DNAJA4 Q8WW22.2.S365.p_DNAJA4 Q8WW22-2_S365s _1_1_365_365 Q8WW22-2 Q8WW22-2|Q8WW22-3 Isoform 2 of DnaJ homolog subfamily A member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19902.19902.3 10.82 8.78 99 1 1 1 0 484.2669 1370.8196 S365s TMT10 362 (K) HWLsLEK (L) HWLS(1.0)LEK K:TMT10,s:Phosphorylated S DNAJA4 48646.9 1 3 2893.1 66.67 HUMAN 1 -13.9241 24.012 FPEKPPPSPGDRARV-p Q9UGQ3;S23-p FPEKPPPSPGDRARV 0.815216209821521 0.463085795747928 -0.0326666666666667 0.0993333333333333 1.70335112654321 4.45794847580372 -0.0326666666666667 0.0993333333333334 0.675561493814189 0.358265634980814 -0.442056571769325 1.00353100302712 Q9UGQ3 SLC2A6 Q9UGQ3.S23.p_SLC2A6 Q9UGQ3_S23s _1_1_23_23 Q9UGQ3 Q9UGQ3|Q9UGQ3-2 Solute carrier family 2, facilitated glucose transporter member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27677.27677.3 13.03 13.03 1.191 3 1 1 0 1097.847 3211.5455 S23s Acetyl 1 (-) MQEPLLGAEGPDYDTFPEKPPPsPGDR (A) MQEPLLGAEGPDY(0.0)DT(0.0)FPEKPPPS(0.99)PGDR K:TMT10,s:Phosphorylated S SLC2A6 54880.6 1 1 6222.1 13.03 HUMAN 1 -1.7034 4.4579 FPELAACTPPASPEP-p Q8WX93;T704-p FPELAACTPPASPEP 0.955933195191128 0.0238238739251907 -0.0103333333333333 0.322 0.382263962683389 22.1266457167545 -0.0103333333333333 0.322 0.915742991899074 0.00612823524622764 -0.110833829610649 4.34631993428169 Q8WX93 PALLD Q8WX93.T704.p_PALLD Q8WX93_T704t _1_1_704_704 Q8WX93 Q8WX93|Q8WX93-3 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.34421.34421.4 12.36 12.36 5.372 6 1 1 0 962.9658 3768.8967 T704t TMT10 684 (R) SAPPSPPFPPPPAFPELAACtPPASPEPMSALASR (S) S(0.0)APPS(0.0)PPFPPPPAFPELAACT(0.99)PPAS(0.0)PEPMS(0.0)ALAS(0.0)R C:Carbamidomethylation,t:Phosphorylated T PALLD 151930.4 1 4 338.1 354.43 HUMAN 1 -0.3823 22.1266 FPELEERSLETARAE-p Q9H6A9;S1025-p FPELEERSLETARAE 0.190682858290982 0.100991017198033 -0.259333333333333 0.287333333333333 14.0710311102345 13.1552858121901 -0.259333333333333 0.287333333333333 0.039164888004506 0.0483583438295629 -2.70596926108967 2.53767435595647 Q9H6A9 PCNXL3 Q9H6A9.S1025.p_PCNXL3 Q9H6A9_S1025s _1_1_1025_1025 Q9H6A9 Q9H6A9 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22102.22102.3 14.24 14.24 2.248 2 1 1 0 667.0079 1919.0436 S1025s TMT10 1017 (K) LFPELEERsLETAR (A) LFPELEERS(0.99)LET(0.0)AR s:Phosphorylated S PCNX3 224430.8 5 16 168.1 492.45 HUMAN 1 -14.071 13.1553 FPENGFLSPDKLSLL-p P31689;S335-p FPENGFLSPDKLSLL 0.180964171958332 0.0106397962711193 -0.233666666666667 -0.438666666666667 14.6442299453319 27.6684725515905 -0.233666666666667 -0.438666666666667 0.0343223491921637 0.00171061684692172 -2.81198870109666 -5.74475620890027 P31689 DNAJA1 P31689.S335.p_DNAJA1 P31689_S335s _1_1_335_335 P31689 P31689 DnaJ homolog subfamily A member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33008.33008.4 17.52 17.52 4.448 2 1 1 0 729.4033 2834.6271 S335s TMT10 326 (K) VNFPENGFLsPDKLSLLEK (L) VNFPENGFLS(0.99)PDKLS(0.0)LLEK K:TMT10,s:Phosphorylated S DNAJA1 45609.1 14 4 1959.1 105.16 HUMAN 1 -14.6442 -27.6685 FPEPTNNTPKGILHL-p Q9NUL3;T408-p FPEPTNNTPKGILHL 0.186904399781084 0.00297589273654222 -0.351 -0.766 14.3206805501304 38.0635154130795 -0.351 -0.766 0.036977023133571 0.000156188285884141 -2.75198843674583 -9.2935637448004 Q9NUL3 STAU2 Q9NUL3.T408.p_STAU2 Q9NUL3_T408t _1_1_408_408 Q9NUL3 Q9NUL3|A0A0A0MTC5|Q9NUL3-2|E9PH62|E7EVJ4|Q9NUL3-7|A0A0A0MTC6|E7EPX0|Q9NUL3-3|F8VPI7|Q9NUL3-8|A0A0A0MTD1|Q9NUL3-6|A0A0A0MTC4|Q9NUL3-4|G5EA18 Double-stranded RNA-binding protein Staufen homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18444.18444.3 13 10.03 2.205 3 1 1 0 893.4719 2598.4283 T408t TMT10 393 (K) GWSGPKPGFPEPTNNtPK (G) GWS(0.0)GPKPGFPEPT(0.0)NNT(0.99)PK K:TMT10,t:Phosphorylated T STAU2 62867.6 2 4 1170.1 170.28 HUMAN 1 -14.3207 -38.0635 FPFSYQESPPRSPRR-p Q9UGJ0-3;S69-p FPFSYQESPPRSPRR 0.522932385009279 0.0241846702089274 0.106333333333333 0.392333333333333 5.20675159998647 22.0281329880453 0.106333333333333 0.392333333333333 0.301526051059986 0.00626883300994337 1.14181498136553 4.32378575930442 Q9UGJ0 PRKAG2 Q9UGJ0.3.S69.p_PRKAG2 Q9UGJ0-3_S69s _1_1_69_69 Q9UGJ0-3 Q9UGJ0|Q9UGJ0-3|F8WDA1 Isoform C of 5'-AMP-activated protein kinase subunit gamma-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20829.20829.3 14.97 10.5 1.117 5 1 1 0 735.3632 2124.1076 S69s TMT10 60 (K) TVFPFSYQEsPPRSPR (R) T(0.0)VFPFS(0.0)Y(0.0)QES(0.99)PPRS(0.0)PR s:Phosphorylated S PRKAG2 58609 2 3 2725.1 72.63 HUMAN 1 5.2068 22.0281 FPGAEANSPGKAEAE-p Q96GV9;S25-p FPGAEANSPGKAEAE 0.974387172364495 0.937472703076645 0.006 -0.0103333333333333 0.220242577384756 0.397357653315012 0.006 -0.0103333333333333 0.95055169862641 0.912565896389947 0.0649422647138074 -0.115023901253595 Q96GV9 C5orf30 Q96GV9.S25.p_C5orf30 Q96GV9_S25s _1_1_25_25 Q96GV9 Q96GV9 UNC119-binding protein C5orf30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20267.20267.5 20.2 16.4 4.313 5 1 1 0 668.1622 3256.8145 S25s TMT10 11 (R) STLTTLPFPGAEANsPGKAEAEKPR (C) S(0.0)T(0.0)LT(0.0)T(0.0)LPFPGAEANS(0.99)PGKAEAEKPR K:TMT10,s:Phosphorylated S C5orf30 23368.2 5 1 2347.1 87.13 HUMAN 1 0.2202 -0.3974 FPGALRGSPPFEMLS-p P13631;S36-p FPGALRGSPPFEMLS 0.119734359453001 0.0347955129737772 0.334666666666667 0.264 19.1768032361201 19.637460380731 0.334666666666667 0.264 0.0120870321252072 0.0108706111737544 3.70446822729642 3.79810173789007 P13631 RARG P13631.S36.p_RARG P13631_S36s _1_1_36_36 P13631 P13631 Retinoic acid receptor gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36913.36913.5 21.47 21.47 2.785 5 1 1 0 862.4301 4228.168 S36s TMT10 8 (R) LFAAGALGPGSGYPGAGFPFAFPGALRGsPPFEMLSPSFR (G) LFAAGALGPGS(0.0)GY(0.0)PGAGFPFAFPGALRGS(0.99)PPFEMLS(0.0)PS(0.0)FR s:Phosphorylated S RARG 51196.9 2 1 3713.1 44.71 HUMAN 1 19.1768 19.6375 FPGARATSPEAGGGG-p Q13233;S21-p FPGARATSPEAGGGG 0.148266672319898 0.0170159026336601 -0.243666666666667 -0.468333333333333 16.7857089283403 24.407804240301 -0.243666666666667 -0.468333333333333 0.0209618257826241 0.00362426192014119 -3.22054664905576 -4.88942350128871 Q13233 MAP3K1 Q13233.S21.p_MAP3K1 Q13233_S21s _1_1_21_21 Q13233 Q13233 Mitogen-activated protein kinase kinase kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9728.9728.2 13.64 13.64 1.106 2 1 1 0 855.9459 1630.9165 S21s TMT10 19 (R) ATsPEAGGGGGALK (A) AT(0.0)S(0.99)PEAGGGGGALK K:TMT10,s:Phosphorylated S MAP3K1 166521 4 1 505.1 289.91 HUMAN 1 -16.7857 -24.4078 FPGEARISNV_____-p Q96HA4;S378-p FPGEARISNV_____ 0.53742289059316 0.27961548947786 0.122333333333333 -0.15 4.98491359357507 7.29186767469503 0.122333333333333 -0.15 0.317328179823441 0.186557723055852 1.10129270544188 -1.5115773554609 Q96HA4 C1orf159 Q96HA4.S378.p_C1orf159 Q96HA4_S378s _1_1_378_378 Q96HA4 Q96HA4|Q5T2W9|Q96HA4-5|Q96HA4-4 Uncharacterized protein C1orf159 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20444.20444.3 11.39 11.39 11.39 2 1 1 0 642.3174 1844.9704 S378s TMT10 365 (R) ATDPAAFPGEARIsNV (-) AT(0.0)DPAAFPGEARIS(0.99)NV s:Phosphorylated S C1orf159 40910 1 2 5711.1 16.95 HUMAN 1 4.9849 -7.2919 FPGEDGDTDEEFWIR-p Q9BXF3;T546-p FPGEDGDTDEEFWIR 0.468497972007344 0.567307286369336 0.102 0.0803333333333334 6.0799167451998 3.31927588803543 0.102 0.0803333333333333 0.246608661197275 0.465663728533844 1.29878759936975 0.784430211014088 Q9BXF3 CECR2 Q9BXF3.T546.p_CECR2 Q9BXF3_T546t _1_1_546_546 Q9BXF3 Q9BXF3 Cat eye syndrome critical region protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18088.18088.5 16.66 16.66 99 1 1 1 0 629.8919 3065.4641 T546t TMT10 538 (K) HFPGEDGDtDEEFWIREDEKR (E) HFPGEDGDT(1.0)DEEFWIREDEKR K:TMT10,t:Phosphorylated T CECR2 165636.6 1 3 2674.1 74.3 HUMAN 1 6.0799 3.3193 FPGPGERSLVGFGPP-p A0A087X165;S585-p FPGPGERSLVGFGPP 0.526923140978838 0.0543385999437264 -0.0936666666666667 1.07966666666667 5.15029177556987 16.8625191638895 -0.0936666666666667 1.07966666666667 0.305471587887699 0.0205943497310548 -1.13152987575037 3.2331668174014 A0A087X165 NotFound A0A087X165.S585.p_NotFound A0A087X165_S585s _1_1_585_585 A0A087X165 A0A087X165|Q9C0H9-5|Q9C0H9-2 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30625.30625.4 8.1 4.86 8.1 3 1 1 0 649.3428 2514.408 S585s TMT10 585 (R) sLVGFGPPVPAKDTETRER (M) S(0.99)LVGFGPPVPAKDT(0.0)ET(0.0)RER K:TMT10,s:Phosphorylated S SRCIN1 130745.5 2 20 98.1 603.22 HUMAN 1 -5.1503 16.8625 FPGPGLQSPLHAKPY-p Q6EMK4;S665-p FPGPGLQSPLHAKPY 0.325232560967435 0.00259997565261951 0.135333333333333 -0.683333333333333 9.13774713368127 39.3841680858647 0.135333333333333 -0.683333333333333 0.121962210362788 0.000115234677682791 1.83221029668881 -9.85778687146458 Q6EMK4 VASN Q6EMK4.S665.p_VASN Q6EMK4_S665s _1_1_665_665 Q6EMK4 Q6EMK4 Vasorin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.32102.32102.4 17.44 17.77 4.334 5 1 1 0 1073.0347 4209.1401 S665s TMT10 637 (K) ATEGGGEALPSGSECEVPLMGFPGPGLQsPLHAKPYI (-) AT(0.0)EGGGEALPS(0.0)GS(0.0)ECEVPLMGFPGPGLQS(0.99)PLHAKPY(0.0)I C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VASN 72795.4 1 1 5137.1 22.53 HUMAN 1 9.1377 -39.3842 FPIKPVPSPSWSGSC-p Q9P0U3;S157-p FPIKPVPSPSWSGSC 0.154754532748189 0.0171189974761747 -0.233666666666667 -0.351666666666667 16.2815394966817 24.3705535485572 -0.233666666666667 -0.351666666666667 0.0235421460876631 0.0036554819613905 -3.12243715719343 -4.88021142344112 Q9P0U3 SENP1 Q9P0U3.S157.p_SENP1 Q9P0U3_S157s _1_1_157_157 Q9P0U3 Q9P0U3|Q9P0U3-2 Sentrin-specific protease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18801.18801.4 13.15 13.15 1.842 5 1 1 0 646.5891 2503.3644 S157s TMT10 149 (K) SFPIKPVPsPSWSGSCRR (S) S(0.0)FPIKPVPS(0.99)PS(0.0)WS(0.0)GS(0.0)CRR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SENP1 74049.8 3 8 1420.1 144.33 HUMAN 1 -16.2815 -24.3706 FPKPYPNSEAARAAN-p P08574;S182-p FPKPYPNSEAARAAN 0.688052891491185 0.116984693908901 0.0763333333333333 0.164333333333333 3.04935215200997 12.2874585348457 0.0763333333333334 0.164333333333333 0.495524103867302 0.059054656336717 0.730418573282426 2.38220566679415 P08574 CYC1 P08574.S182.p_CYC1 P08574_S182s _1_1_182_182 P08574 P08574 Cytochrome c1, heme protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26636.26636.3 11.81 11.81 3.229 3 1 1 0 818.4169 2373.2643 S182s TMT10 171 (K) LFDYFPKPYPNsEAAR (A) LFDY(0.0)FPKPY(0.0)PNS(0.99)EAAR K:TMT10,s:Phosphorylated S CYC1 35763.7 1 1 6421.1 11.81 HUMAN 1 3.0494 12.2875 FPKSPALSDANKASA-p P52701;S18-p FPKSPALSDANKASA 0.928862324790053 0.146598142473043 0.0136666666666667 -0.294333333333333 0.63584793126563 10.9813892454627 0.0136666666666667 -0.294333333333333 0.863803992200172 0.0797739461090946 0.179862775501451 -2.15188095654432 P52701 MSH6 P52701.S18.p_MSH6 P52701_S18s_1_1_18_18 P52701 P52701|P52701-3|P52701-2|A0A087WWJ1 DNA mismatch repair protein Msh6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26263.26263.3 9.79 9.79 1.183 6 1 1 0 957.1774 2788.5488 S18s N21n TMT10 4 (R) QSTLYSFFPKSPALsDAnK (A) QS(0.0)T(0.0)LY(0.0)S(0.0)FFPKS(0.0)PALS(0.99)DAN(1.0)K K:TMT10,s:Phosphorylated S,n:Deamidated MSH6 154608.6 1 3 875.1 209.27 HUMAN 1 0.6358 -10.9814 FPKTNATSPGVNSST-p O75044;S1053-p FPKTNATSPGVNSST 0.432750868909897 0.00657341576333256 -0.114666666666667 -0.479 6.70101247811896 31.3773654434647 -0.114666666666667 -0.479823088658625 0.213746372085573 0.000728221430854021 -1.4085686873256 -6.8508645567799 O75044 SRGAP2 O75044.S1053.p_SRGAP2 O75044_S1053s _1_1_1053_1053 O75044 O75044|B7ZM87 SLIT-ROBO Rho GTPase-activating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7757.7757.3 12.79 12.79 1.13 9 1 1 0 806.3922 2337.1934 S1053s TMT10 1049 (K) TNATsPGVNSSTSPQSTDK (S) T(0.0)NAT(0.0)S(0.99)PGVNS(0.0)S(0.0)T(0.0)S(0.0)PQS(0.0)T(0.0)DK K:TMT10,s:Phosphorylated S SRGAP2 122066.6 1 11 489.1 294.64 HUMAN 1 -6.701 -31.3774 FPKWKPGSLASHVKN-p P06493;S248-p FPKWKPGSLASHVKN 0.0650471958528329 0.0154604915090575 -0.498333333333333 -0.406666666666667 25.6790082958501 25.0438925882063 -0.498333333333333 -0.406666666666667 0.0027045758789581 0.00313047861363693 -5.21782999985741 -5.04858631938178 P06493 CDK1 P06493.S248.p_CDK1 P06493_S248s _1_1_248_248 P06493 A0A024QZP7|P06493|P06493-2 Cyclin-dependent kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16280.16280.3 12.66 12.66 1.158 2 1 1 0 659.7139 1897.1627 S248s TMT10 244 (K) WKPGsLASHVK (N) WKPGS(0.99)LAS(0.0)HVK K:TMT10,s:Phosphorylated S CDK1 34151.9 2 9 1934.1 106.29 HUMAN 1 -25.679 -25.0439 FPLMRSKSLQLTGKE-p Q9UBS9-2;S1232-p FPLMRSKSLQLTGKE 0.514956504876549 0.00698909749920336 0.110666666666667 -0.769666666666667 5.32203709118808 30.8986546247131 0.110666666666667 -0.769666666666667 0.293627204823708 0.00081308235714667 1.1627592793195 -6.69922999518613 Q9UBS9 SUCO Q9UBS9.2.S1232.p_SUCO Q9UBS9-2_S1232s _1_1_1232_1232 Q9UBS9-2 Q9UBS9-2|B4DYM4|A0A087WV04 Isoform 2 of SUN domain-containing ossification factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.30106.30106.4 22.14 22.14 2.105 3 1 1 0 785.4409 3058.7643 S1232s TMT10 1232 (K) sLQLTGKEVDPNDLYIVEPLK (F) S(0.99)LQLT(0.0)GKEVDPNDLY(0.0)IVEPLK K:TMT10,s:Phosphorylated S SUCO 157841.3 9 4 1071.1 180.72 HUMAN 1 5.322 -30.8987 FPLQQMDSPLDSSRY-p Q13144;S610-p FPLQQMDSPLDSSRY 0.787307528272418 0.102989559276006 0.0473333333333333 0.385333333333333 2.00543288163341 13.0393401121421 0.0473333333333333 0.385333333333333 0.630168531013942 0.0496667781801305 0.510004854930436 2.51677236771269 Q13144 EIF2B5 Q13144.S610.p_EIF2B5 Q13144_S610s _1_1_610_610 Q13144 Q13144 Translation initiation factor eIF-2B subunit epsilon HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36765.36765.3 28.1 28.1 3.68 4 1 1 0 1098.5413 3213.6485 S610s TMT10 591 (K) EVMQVLSHVVLEFPLQQMDsPLDSSR (Y) EVMQVLS(0.0)HVVLEFPLQQMDS(0.99)PLDS(0.0)S(0.0)R s:Phosphorylated S EIF2B5 81120.1 3 3 3244.1 56.12 HUMAN 1 2.0054 13.0393 FPLRKTASEPNLKLR-p P56524;S246-p FPLRKTASEPNLKLR 0.272596532101247 0.505369735382053 0.195333333333333 0.0836666666666667 10.6922586795619 3.97254285449257 0.195333333333333 0.0836666666666667 0.0852656548903846 0.400632073298628 2.10227891828246 0.911723861180997 P56524 HDAC4 P56524.S246.p_HDAC4 P56524_S246s _1_1_246_246 P56524 Q9UQL6-3|P56524|Q9UKV0-4|Q9UKV0-3|Q9UKV0-10 Histone deacetylase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10320.10529.2 10.52 3.8 2.888 2 1 1 0 699.3755 1317.7778 S246s TMT10 244 (K) TAsEPNLK (L) T(0.0)AS(0.99)EPNLK K:TMT10,s:Phosphorylated S HDAC4 119836.3 6 1 1282.1 158.68 HUMAN 1 10.6923 3.9725 FPLRKTVSEPNLKLR-p Q8WUI4-8;S211-p FPLRKTVSEPNLKLR 0.277753467245275 0.125730596827067 -0.158666666666667 -0.191 10.5284496396342 11.8759293551137 -0.158666666666667 -0.191 0.0885431638051787 0.0649242684019414 -2.07368873979182 -2.30920887892992 Q8WUI4 HDAC7 Q8WUI4.8.S211.p_HDAC7 Q8WUI4-8_S211s _1_1_211_211 Q8WUI4-8 Q8WUI4-8|J3KPH8|Q8WUI4-5|Q8WUI4-6|Q8WUI4-7|Q8WUI4-4|Q8WUI4-3|F8VWY3 Isoform 8 of Histone deacetylase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12986.12986.2 12.05 3.36 2.988 2 1 1 0 713.3914 1345.8091 S211s TMT10 209 (K) TVsEPNLK (L) T(0.0)VS(0.99)EPNLK K:TMT10,s:Phosphorylated S HDAC7 109962.1 5 1 2445.1 83.2 HUMAN 1 -10.5284 -11.8759 FPMARSISTSGPLDK-p A0A0U1RR27;S1633-p FPMARSISTSGPLDK 0.378868471836981 1 0.13 -9.25185853854297e-18 7.78802067527013 0 0.13 -8.01234452659818e-18 0.166417093405092 1 1.5983649944357 -7.11094787370413e-17 A0A0U1RR27 NotFound A0A0U1RR27.S1633.p_NotFound A0A0U1RR27_S1633s _1_1_1633_1633 A0A0U1RR27 A0A0U1RR27|Q7Z401-2 C-myc promoter-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11586.11586.3 10.05 10.05 1.162 5 1 1 0 862.796 2506.408 S1633s TMT10 1631 (R) SIsTSGPLDKEDTGRQK (L) S(0.0)IS(0.99)T(0.0)S(0.0)GPLDKEDT(0.0)GRQK K:TMT10,s:Phosphorylated S DENND4A 217514.7 3 18 399.1 328.24 HUMAN 1 7.788 0 FPNGGDLSDVEFDSS-p Q13615;S288-p FPNGGDLSDVEFDSS 0.842098881009258 0.0329733190457256 -0.0466666666666667 -0.352666666666667 1.44395765321421 19.9847745920514 -0.0466666666666667 -0.352666666666667 0.717140475250833 0.0100351193217109 -0.381810181083847 -3.87206386510162 Q13615 MTMR3 Q13615.S288.p_MTMR3 Q13615_S288s _1_1_288_288 Q13615 Q13615|Q13615-2|Q13615-3|G5E953 Myotubularin-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.29435.29435.4 12.4 7.36 1.101 6 1 1 0 959.2086 3753.8496 S288s TMT10 280 (R) DFPNGGDLsDVEFDSSLSNASGAESLAIQPQK (L) DFPNGGDLS(0.99)DVEFDS(0.0)S(0.0)LS(0.0)NAS(0.0)GAES(0.0)LAIQPQK K:TMT10,s:Phosphorylated S MTMR3 136241 4 2 913.1 201.43 HUMAN 1 -1.444 -19.9848 FPPEITVTPPTPTLL-p Q9Y6J0;T2151-p FPPEITVTPPTPTLL 0.462859184840488 0.00520869187654939 0.0983333333333333 0.591333333333333 6.1742461992495 33.2059843638306 0.0983333333333334 0.591333333333333 0.24131003357467 0.000477971017844746 1.31554530576043 7.45653562950711 Q9Y6J0 CABIN1 Q9Y6J0.T2151.p_CABIN1 Q9Y6J0_T2151tT2154t_2_2_2151_2154 Q9Y6J0 Q9Y6J0|A0A087WWW8|Q9Y6J0-2|B5MEB3 Calcineurin-binding protein cabin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36015.36222.4 16.46 16.46 1.358 7 2 2 0 916.5157 3503.1107 T2151t T2154t TMT10 2135 (K) LVIPSAATKFPPEITVtPPtPTLLSPK (G) LVIPS(0.0)AAT(0.0)KFPPEIT(0.0)VT(0.99)PPT(0.99)PT(0.0)LLS(0.0)PK K:TMT10,t:Phosphorylated T CABIN1 248858 6 15 763.1 229.21 HUMAN 1 6.1742 33.206 FPPKDAVSPFSFSLL-p Q8NB46;S1028-p FPPKDAVSPFSFSLL 0.0519571788354811 0.00105578872948118 -0.837333333333333 -1.26766666666667 28.0418643633557 50.7279192164475 -0.837333333333333 -1.26766666666667 0.00156968881498669 8.45683930604733e-06 -5.85778295796406 -16.1940877715475 Q8NB46 ANKRD52 Q8NB46.S1028.p_ANKRD52 Q8NB46_S1028s _1_1_1028_1028 Q8NB46 Q8NB46 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32971.32971.3 12.14 12.14 2.105 3 1 1 0 617.0034 1769.0249 S1028s TMT10 1025 (K) DAVsPFSFSLLK (N) DAVS(0.99)PFS(0.0)FS(0.0)LLK K:TMT10,s:Phosphorylated S ANKRD52 116900.4 4 1 4063.1 38.31 HUMAN 1 -28.0419 -50.7279 FPPPPGVSPAEAAGV-p Q92733;S97-p FPPPPGVSPAEAAGV 0.534390357489892 0.107375173941846 0.234666666666667 0.316333333333333 5.03835411103568 12.7985576037036 0.234666666666667 0.316333333333333 0.313447340178825 0.052498179036174 1.11108208817589 2.47349861576113 Q92733 PRCC Q92733.S97.p_PRCC Q92733_S97s _1_1_97_97 Q92733 Q92733 Proline-rich protein PRCC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37541.37541.5 12.41 12.41 12.413 2 1 1 0 822.0407 4026.2054 S97s TMT10 77 (R) LQPPPPLPFGLGGFPPPPGVsPAEAAGVGEGLGLGLPSPR (G) LQPPPPLPFGLGGFPPPPGVS(0.99)PAEAAGVGEGLGLGLPS(0.0)PR s:Phosphorylated S PRCC 52416.8 1 2 1101.1 177.58 HUMAN 1 5.0384 12.7986 FPPQQAGSPLKPAAP-p Q3ZLR7;S487-p FPPQQAGSPLKPAAP 0.209461411369469 0.346415845321786 0.654 0.589333333333333 13.1079891921161 6.10229429338446 0.654 0.589333333333333 0.0488878660519606 0.24534124831188 2.53054433030787 1.30245121937984 Q3ZLR7 NotFound Q3ZLR7.S487.p_NotFound Q3ZLR7_S487s _1_1_487_487 Q3ZLR7 Q3ZLR7|P0C7V6 Transcription factor SPT20 homolog-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24948.24948.5 10.05 2.83 2.385 8 1 1 0 791.217 3872.1386 S487s TMT10 460 (K) HPPPRTQLPSSSGKISSGNSFPPQQAGsPLK (P) HPPPRT(0.0)QLPS(0.0)S(0.0)S(0.0)GKIS(0.0)S(0.0)GNS(0.0)FPPQQAGS(0.99)PLK K:TMT10,s:Phosphorylated S SUPT20HL1 90228.6 1 1 6702.1 10.05 HUMAN 1 13.108 6.1023 FPQSSSWSGQNIFEN-p Q8TDM6;S803-p FPQSSSWSGQNIFEN 0.415445171152023 0.0303096782504432 -0.161333333333333 0.290666666666667 7.03850175472223 20.532505323373 -0.161333333333333 0.290666666666667 0.197765178011782 0.00884605158643131 -1.46775107220068 3.99031375383983 Q8TDM6 DLG5 Q8TDM6.S803.p_DLG5 Q8TDM6_S803s _1_1_803_803 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.29028.29028.4 22.02 15.69 1.209 5 1 1 0 820.9198 3200.6831 S803s TMT10 795 (K) VFPQSSSWsGQNIFENIKDSDK (M) VFPQS(0.0)S(0.0)S(0.0)WS(0.99)GQNIFENIKDS(0.0)DK K:TMT10,s:Phosphorylated S DLG5 215575.4 11 13 34.1 890.58 HUMAN 1 -7.0385 20.5325 FPRDPYGSLDRHTQT-p Q8N4S9;S161-p FPRDPYGSLDRHTQT 0.14666043453421 0.413743907346601 0.349333333333333 0.0853333333333334 16.9731395754987 5.09915438939992 0.349333333333333 0.0853333333333334 0.020076409361932 0.309089719954174 3.25734628088907 1.12196740654521 Q8N4S9 MARVELD2 Q8N4S9.S161.p_MARVELD2 Q8N4S9_S161s _1_1_161_161 Q8N4S9 Q8N4S9|Q8N4S9-3|Q8N4S9-2|A1BQX2|A0A0G2JQ38 MARVEL domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13428.13530.5 16.29 10.94 3.007 4 1 1 0 640.1326 3116.6642 S161s TMT10 148 (R) KEADAVFPRDPYGsLDRHTQTVR (T) KEADAVFPRDPY(0.0)GS(0.99)LDRHT(0.0)QT(0.0)VR K:TMT10,s:Phosphorylated S MARVELD2 64623.4 13 6 1043.1 184.85 HUMAN 1 16.9731 5.0992 FPRGELESPKPLVTP-p Q9GZN2;S153-p FPRGELESPKPLVTP 0.551931763784542 0.945765679801271 -0.108 -0.0116666666666666 4.7634012028137 0.348648638098195 -0.108 -0.0116666666666666 0.333933415671906 0.922858541524841 -1.0605162146377 -0.101424649752743 Q9GZN2 TGIF2 Q9GZN2.S153.p_TGIF2 Q9GZN2_S153s _1_1_153_153 Q9GZN2 Q9GZN2 Homeobox protein TGIF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28134.28134.4 15.87 15.87 3.626 6 1 1 0 687.6409 2667.5697 S153s TMT10 149 (R) GELEsPKPLVTPGSTLTLLTR (A) GELES(0.99)PKPLVT(0.0)PGS(0.0)T(0.0)LT(0.0)LLT(0.0)R K:TMT10,s:Phosphorylated S TGIF2 25992.1 1 2 4413.1 31.79 HUMAN 1 -4.7634 -0.3486 FPRNGTKSPEAATPV-p Q5VWN6;S685-p FPRNGTKSPEAATPV 0.984880457815387 0.0513969838193508 0.003 -0.237333333333333 0.13354945119239 17.206257302962 0.003 -0.237333333333333 0.969717101898622 0.0190271731221683 0.0397509476573726 -3.30081654317368 Q5VWN6 FAM208B Q5VWN6.S685.p_FAM208B Q5VWN6_S685s _1_1_685_685 Q5VWN6 Q5VWN6 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9856.9856.2 12.82 12.82 1.108 3 1 1 0 1062.5879 2044.2006 S685s TMT10 681 (R) NGTKsPEAATPVGK (V) NGT(0.0)KS(0.99)PEAAT(0.0)PVGK K:TMT10,s:Phosphorylated S FAM208B 271861.7 17 7 275.1 391.61 HUMAN 1 0.1335 -17.2063 FPRSLDDSEEDDDED-p Q13563;S812-p FPRSLDDSEEDDDED 0.564000583108555 0.519810345980067 0.117 -0.0856666666666667 4.58076461389396 3.81793172801664 0.117 -0.0856666666666667 0.348275992565369 0.415151706259248 1.02663829246756 -0.882018637744979 Q13563 PKD2 Q13563.S812.p_PKD2 Q13563_S812s _1_1_812_812 Q13563 Q13563|Q13563-3|B4DFN3 Polycystin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4403.4403.3 23.02 23.02 4.776 5 1 1 0 768.6237 2223.8959 S812s TMT10 808 (R) SLDDsEEDDDEDSGHSSR (R) S(0.0)LDDS(0.99)EEDDDEDS(0.0)GHS(0.0)S(0.0)R s:Phosphorylated S PKD2 110430.9 1 1 5095.1 23.02 HUMAN 1 4.5808 -3.8179 FPRYRTASQGPQTDS-p Q9NZN5;S1288-p FPRYRTASQGPQTDS 0.0256696279021321 0.00723475027433371 -0.814 -0.700666666666667 36.9033697473883 30.6267430344648 -0.814 -0.700666666666667 0.000204015434808057 0.000865616839598378 -8.84042052368184 -6.61432767929648 Q9NZN5 ARHGEF12 Q9NZN5.S1288.p_ARHGEF12 Q9NZN5_S1288s _1_1_1288_1288 Q9NZN5 Q9NZN5|Q9NZN5-2|E9PMR6 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16154.16154.2 18.37 18.37 2.216 5 1 1 0 1278.1425 2475.3091 S1288s TMT10 1286 (R) TAsQGPQTDSVIQNSENIK (A) T(0.0)AS(0.99)QGPQT(0.0)DS(0.0)VIQNS(0.0)ENIK K:TMT10,s:Phosphorylated S ARHGEF12 174199.1 6 10 251.1 406.16 HUMAN 1 -36.9034 -30.6267 FPSAMLPSPPKQKSS-p Q5SW79;S1515-p FPSAMLPSPPKQKSS 0.748199576555753 0.37236988138142 0.0446666666666667 -0.105 2.39506837488622 5.6922095644239 0.0446666666666667 -0.105 0.57609374852645 0.269636724992089 0.594618172623227 -1.22925454567277 Q5SW79 CEP170 Q5SW79.S1515.p_CEP170 Q5SW79_S1515s _1_1_1515_1515 Q5SW79 Q5SW79|Q5SW79-3|Q5SW79-2|E7EMW0|E7EWM2|Q96L14 Centrosomal protein of 170 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36486.36486.5 28.18 22.5 1.417 3 1 1 0 901.8729 4425.3587 S1515s TMT10 1486 (K) QLQAINAMIDPDGTLEALNNMGFPSAMLPsPPKQK (S) Q(0.0)LQAIN(0.0)AM(0.0)IDPDGT(0.0)LEALN(0.0)N(0.0)M(0.0)GFPS(0.0)AM(0.0)LPS(0.99)PPKQK K:TMT10,s:Phosphorylated S CEP170 175689.3 18 26 128.1 537.52 HUMAN 1 2.3951 -5.6922 FPSDRSSSLEGFHNH-p Q13480-2;S419-p FPSDRSSSLEGFHNH 0.0360407965324359 0.00363253604516551 -0.555666666666667 -0.664666666666667 33.3822356782281 36.2656678695946 -0.555666666666667 -0.664666666666667 0.000458961685910258 0.000236283400832065 -7.53093402697017 -8.57203134115985 Q13480 GAB1 Q13480.2.S419.p_GAB1 Q13480-2_S419s _1_1_419_419 Q13480-2 Q13480-2|B7Z3B9 Isoform 2 of GRB2-associated-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10212.10212.4 12.32 12.32 1.425 3 1 1 0 482.7429 1847.9805 S419s TMT10 417 (R) SSsLEGFHNHFK (V) S(0.0)S(0.0)S(0.99)LEGFHNHFK K:TMT10,s:Phosphorylated S GAB1 80631.3 5 11 368.1 340.82 HUMAN 1 -33.3822 -36.2657 FPSSGPVTPQPTALT-p Q9Y679;T433-p FPSSGPVTPQPTALT 0.175206292263787 0.00653029995169545 -0.233333333333333 -0.722666666666667 15.0579644718221 31.4206531755578 -0.233333333333333 -0.722666666666667 0.031203517430468 0.000720999033328396 -2.88932954409418 -6.86471382851133 Q9Y679 AUP1 Q9Y679.T433.p_AUP1 Q9Y679_T433t _1_1_433_433 Q9Y679 Q9Y679|Q9Y679-2 Ancient ubiquitous protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24329.24329.4 16.02 16.02 3.012 10 1 1 0 936.2581 3662.0408 T433t TMT10 414 (K) GTQSLPTASASKFPSSGPVtPQPTALTFAK (S) GT(0.0)QS(0.0)LPT(0.0)AS(0.0)AS(0.0)KFPS(0.0)S(0.0)GPVT(0.99)PQPT(0.0)ALT(0.0)FAK K:TMT10,t:Phosphorylated T AUP1 53540.8 3 1 4588.1 29.19 HUMAN 1 -15.058 -31.4207 FPTKLHLSPPLGRQL-p Q6P0Q8;S1381-p FPTKLHLSPPLGRQL 0.678842125738791 0.0300718164158273 -0.0883333333333333 -0.576666666666667 3.1485831118542 20.5934325791003 -0.0883333333333333 -0.576666666666667 0.484330354856746 0.00872281661402125 -0.750432959788011 -4.00359170955772 Q6P0Q8 MAST2 Q6P0Q8.S1381.p_MAST2 Q6P0Q8_S1381s _1_1_1381_1381 Q6P0Q8 Q6P0Q8 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17974.18182.3 12.74 12.74 99 1 1 1 0 433.578 1218.752 S1381s TMT10 1378 (K) LHLsPPLGR (Q) LHLS(1.0)PPLGR s:Phosphorylated S MAST2 197687.5 3 59 121.1 549.41 HUMAN 1 -3.1486 -20.5934 FPTQRSDSIRPALNS-p Q9UKV5;S509-p FPTQRSDSIRPALNS 0.505605211357178 0.847852637843165 0.145333333333333 -0.0343333333333333 5.46741125795842 1.00599696113916 0.145333333333333 -0.0343333333333332 0.283961115915772 0.793232142467526 1.18906599251827 -0.275354883250902 Q9UKV5 AMFR Q9UKV5.S509.p_AMFR Q9UKV5_S509s _1_1_509_509 Q9UKV5 Q9UKV5 E3 ubiquitin-protein ligase AMFR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17112.17112.4 18.53 12.83 2.119 9 1 1 0 1115.5502 4379.1912 S509s TMT10 507 (R) SDsIRPALNSPVERPSSDQEEGETSAQTERVPLDLSPR (L) S(0.0)DS(0.99)IRPALNS(0.0)PVERPS(0.0)S(0.0)DQEEGET(0.0)S(0.0)AQT(0.0)ERVPLDLS(0.0)PR s:Phosphorylated S AMFR 73793.2 3 2 1976.1 104.62 HUMAN 1 5.4674 -1.006 FPVRDDPSDVTDEDE-p Q3YEC7-2;S597-p FPVRDDPSDVTDEDE 0.311947299116861 0.444523734056911 0.148 0.082 9.4644129407748 4.68826163613805 0.148 0.082 0.113125029618985 0.339761242652179 1.88879106024227 1.04640726152245 Q3YEC7 RABL6 Q3YEC7.2.S597.p_RABL6 Q3YEC7-2_S597sT600t_2_2_597_600 Q3YEC7-2 Q3YEC7-2 Isoform 2 of Rab-like protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26241.26443.5 23.24 19.52 99 2 2 2 0 915.439 4413.2403 S597s T600t TMT10 586 (R) RADDFPVRDDPsDVtDEDEGPAEPPPPPKLPLPAFR (L) RADDFPVRDDPS(1.0)DVT(1.0)DEDEGPAEPPPPPKLPLPAFR K:TMT10,s:Phosphorylated S,t:Phosphorylated T RABL6 79919.7 20 12 429.1 317.58 HUMAN 1 9.4644 4.6883 FPYNYPPSPTVHDKM-p A0A1B0GUN5;S530-p FPYNYPPSPTVHDKM 0.64684633129603 0.181778785905872 0.0643333333333333 0.159 3.54351528887337 9.7401102676378 0.0643333333333333 0.159 0.442230275137553 0.106166860102502 0.828800392539166 1.93583200466022 A0A1B0GUN5 NotFound A0A1B0GUN5.S530.p_NotFound A0A1B0GUN5_S530s_1_1_530_530 A0A1B0GUN5 A0A1B0GUN5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22271.22687.5 18.61 18.61 1.16 6 1 1 0 755.5841 3692.9266 N526n S530s TMT10 509 (K) YDYLGDRRPVPAGLFPYnYPPsPTVHDK (M) Y(0.0)DY(0.0)LGDRRPVPAGLFPY(0.0)N(1.0)Y(0.0)PPS(0.99)PT(0.0)VHDK K:TMT10,n:Deamidated,s:Phosphorylated S PLEKHA6 131629.9 7 2 52.2 743.36 HUMAN 1 3.5435 9.7401 FQAGHRRTPSEADRW-p P49757;T436-p FQAGHRRTPSEADRW 0.665096933693565 0.0660128826966847 0.0626666666666667 0.299333333333333 3.31330839430428 15.7005822272245 0.0626666666666667 0.299333333333333 0.46630402113028 0.0269117399349421 0.783361017544501 3.00883085167671 P49757 NUMB P49757.T436.p_NUMB P49757_T436t _1_1_436_436 P49757 P49757|P49757-3|P49757-2|P49757-4|G3V3Z8|P49757-5|P49757-6|P49757-7|P49757-8|P49757-9 Protein numb homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23481.23481.3 13.17 7.07 10.852 3 1 1 0 729.0358 2105.1279 T436t TMT10 436 (R) tPSEADRWLEEVSK (S) T(0.99)PS(0.0)EADRWLEEVS(0.0)K K:TMT10,t:Phosphorylated T NUMB 71487.2 9 7 538.1 277.23 HUMAN 1 3.3133 15.7006 FQCHTFDSSNVE___-p P24593;S268-p FQCHTFDSSNVE___ 0.330325771589878 0.103267630455874 0.159666666666667 0.315666666666667 8.98957469824726 13.024632787718 0.159666666666667 0.315666666666667 0.126195111058866 0.0498352591770908 1.80655812208658 2.51412403919801 P24593 IGFBP5 P24593.S268.p_IGFBP5 P24593_S268sS269s_2_2_268_269 P24593 P24593 Insulin-like growth factor-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31104.31104.3 16.13 16.13 2.312 5 2 2 0 1215.8419 3484.59 S268s S269s N270n TMT10 247 (K) YGMKLPGMEYVDGDFQCHTFDssnVE (-) Y(0.0)GMKLPGMEY(0.0)VDGDFQCHT(0.0)FDS(0.99)S(0.99)N(1.0)VE K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated IGFBP5 31596.7 1 5 2059.1 100.08 HUMAN 1 8.9896 13.0246 FQDAYYQSPETRLRF-p O95671;S421-p FQDAYYQSPETRLRF 0.357172198749098 0.357490022850565 -0.137 0.0926666666666667 8.31038408058318 5.92625601864666 -0.137 0.0926666666666667 0.147557603077416 0.255490289334252 -1.68896563271796 1.27111663986312 O95671 ASMTL O95671.S421.p_ASMTL O95671_S421s _1_1_421_421 O95671 O95671|O95671-2|O95671-3 N-acetylserotonin O-methyltransferase-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18848.18848.3 18.39 18.39 2.509 4 1 1 0 867.0884 2519.2818 S421s TMT10 409 (K) KAEDLFQDAYYQsPETR (L) KAEDLFQDAY(0.0)Y(0.0)QS(0.99)PET(0.0)R K:TMT10,s:Phosphorylated S ASMTL 69597.2 2 4 2260.1 90.98 HUMAN 1 -8.3104 5.9263 FQDGWPRSPGRAFLP-p O60292;S158-p FQDGWPRSPGRAFLP 0.920710173125642 0.141209378157351 0.0176666666666667 -0.245 0.702553146034487 11.2011414800459 0.0176666666666667 -0.245 0.850637815159314 0.0758378220117616 0.197507305377047 -2.19037732820533 O60292 SIPA1L3 O60292.S158.p_SIPA1L3 O60292_S158s _1_1_158_158 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14276.14276.3 12.11 7.44 7.438 2 1 1 0 800.4012 2319.2246 S158s TMT10 146 (R) SKDVEFQDGWPRsPGR (A) S(0.0)KDVEFQDGWPRS(0.99)PGR K:TMT10,s:Phosphorylated S SIPA1L3 195918.6 2 5 144.1 520.25 HUMAN 1 0.7026 -11.2011 FQDPAIPTPPPSTRS-p Q8IX15-3;T439-p FQDPAIPTPPPSTRS 0.709670809730963 0.253059813917132 -0.0516666666666667 0.148333333333333 2.80050022841003 7.85977666055504 -0.0516666666666667 0.148333333333333 0.524747015437795 0.163690069820383 -0.679591941461475 1.61032483145695 Q8IX15 HOMEZ Q8IX15.3.T439.p_HOMEZ Q8IX15-3_T439t _1_1_439_439 Q8IX15-3 Q8IX15-3 Isoform 2 of Homeobox and leucine zipper protein Homez HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25534.25534.4 25.63 25.63 6.305 4 1 1 0 783.3896 3050.5686 T439t TMT10 420 (K) WFRDNAVPGAPSFQDPAIPtPPPSTR (S) WFRDNAVPGAPS(0.0)FQDPAIPT(0.99)PPPS(0.0)T(0.0)R t:Phosphorylated T HOMEZ 62093.3 3 3 1600.1 128.63 HUMAN 1 -2.8005 7.8598 FQDQFSEYKELSAEV-p Q8N4S9;Y469-p FQDQFSEYKELSAEV 0.316248419415575 0.0247309816796438 -0.247666666666667 0.328333333333333 9.35933555360808 21.8662248923471 -0.247666666666667 0.328333333333333 0.115895465620546 0.00650695061695012 -1.87058551012545 4.2869074493008 Q8N4S9 MARVELD2 Q8N4S9.Y469.p_MARVELD2 Q8N4S9_Y469y _1_1_469_469 Q8N4S9 Q8N4S9|Q8N4S9-3|A1BQX2 MARVEL domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19962.19962.3 15 15 2.373 2 1 1 0 633.9799 1819.9631 Y469y TMT10 460 (K) AVFQDQFSEyK (E) AVFQDQFS(0.0)EY(0.99)K K:TMT10,y:Phosphorylated Y MARVELD2 64623.4 1 7 1043.1 184.85 HUMAN 1 -9.3593 21.8662 FQEAKGDSPQEKLKT-p Q00059;S177-p FQEAKGDSPQEKLKT 0.513153005000153 0.272311024913007 0.106666666666667 0.106333333333333 5.35601328132219 7.44054890353942 0.106666666666667 0.106477047226109 0.291339031300852 0.180278987236927 1.16891771171425 1.53747776575099 Q00059 TFAM Q00059.S177.p_TFAM Q00059_S177s _1_1_177_177 Q00059 Q00059 Transcription factor A, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10218.10218.3 10.88 6.5 99 1 1 1 0 711.0396 2051.1376 S177s TMT10 170 (R) FQEAKGDsPQEK (L) FQEAKGDS(1.0)PQEK K:TMT10,s:Phosphorylated S TFAM 29324.3 2 2 2428.1 83.92 HUMAN 1 5.356 7.4405 FQEGQLNSGKKQIEK-p P49454;S106-p FQEGQLNSGKKQIEK 0.93707060991058 0.857546128297549 0.0126666666666667 0.028 0.548462642226847 0.940236231149332 0.0126666666666667 0.028 0.881360810450343 0.805334634448478 0.156435224449392 0.2587941033392 P49454 CENPF P49454.S106.p_CENPF P49454_S106s _1_1_106_106 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13061.13061.3 14.78 14.78 6.941 2 1 1 0 854.1171 2480.3712 S106s TMT10 94 (K) ESQVNFQEGQLNsGKK (Q) ES(0.0)QVNFQEGQLNS(0.99)GKK K:TMT10,s:Phosphorylated S CENPF 371067.2 2 1 47.1 771.73 HUMAN 1 0.5485 0.9402 FQETEFLSPPRKVPR-p P42166;S424-p FQETEFLSPPRKVPR 0.426095734478831 0.00947145523994574 -0.111666666666667 -0.419666666666667 6.8252378630529 28.5699943760737 -0.111666666666667 -0.419666666666667 0.207718995477982 0.00138995443114324 -1.43038599802814 -5.99964936689302 P42166 TMPO P42166.S424.p_TMPO P42166_S424s _1_1_424_424 P42166 P42166 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22211.22211.2 14.5 12.32 4.574 2 1 1 0 830.4024 1579.8318 S424s TMT10 417 (K) FQETEFLsPPR (K) FQET(0.0)EFLS(0.99)PPR s:Phosphorylated S TMPO 76061.2 7 21 123.1 546.19 HUMAN 1 -6.8252 -28.57 FQGKKNMTLAGRLAG-p Q6GYQ0-2;T611-p FQGKKNMTLAGRLAG 0.886118944763575 0.893796276220667 -0.046 0.0206666666666667 1.0248465929918 0.684300459083058 -0.046 0.0206666666666667 0.789796747110136 0.854220430105913 -0.280099373555163 0.192680928397214 Q6GYQ0 RALGAPA1 Q6GYQ0.2.T611.p_RALGAPA1 Q6GYQ0-2_T611t _1_1_611_611 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7835.7835.2 7.01 3.37 99 1 1 1 0 536.2651 991.5556 T611t TMT10 609 (K) NMtLAGR (L) NMT(1.0)LAGR t:Phosphorylated T RALGAPA1 236609.9 1 3 317.1 366.49 HUMAN 1 -1.0248 0.6843 FQHRGGDSPEAKNRV-p Q9H6S3;S217-p FQHRGGDSPEAKNRV 0.907362848442901 0.693506668681778 -0.0353333333333333 -0.0873333333333333 0.828247135060195 2.18190189120048 -0.0353333333333333 -0.0873333333333333 0.826371415753249 0.605075837900598 -0.230223215367357 -0.548653146967836 Q9H6S3 EPS8L2 Q9H6S3.S217.p_EPS8L2 Q9H6S3_S217s _1_1_217_217 Q9H6S3 Q9H6S3-3 Epidermal growth factor receptor kinase substrate 8-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19931.19931.5 17.38 14.98 7.88 2 1 1 0 652.7481 3179.7366 S217s TMT10 196 (R) QSILPPPQGPAPIPFQHRGGDsPEAK (N) QS(0.0)ILPPPQGPAPIPFQHRGGDS(0.99)PEAK K:TMT10,s:Phosphorylated S EPS8L2 81246.7 10 4 559.1 272.21 HUMAN 1 -0.8282 -2.1819 FQIGSFASPESDFES-p Q9P278-2;S749-p FQIGSFASPESDFES 0.980105970574778 0.561696538209072 0.00833333333333332 0.0753333333333334 0.173343688491804 3.3749583234732 0.00833333333333332 0.0753333333333334 0.960872205783654 0.459731400264589 0.0513719651427951 0.795473890552385 Q9P278 FNIP2 Q9P278.2.S749.p_FNIP2 Q9P278-2_S749s _1_1_749_749 Q9P278-2 Q9P278-2 Isoform 2 of Folliculin-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28634.28634.3 20.94 20.94 1.529 5 1 1 0 771.694 2233.0974 S749s TMT10 740 (K) VTFQIGSFAsPESDFESR (M) VT(0.0)FQIGS(0.0)FAS(0.99)PES(0.0)DFES(0.0)R s:Phosphorylated S FNIP2 126626.6 1 4 3265.1 55.59 HUMAN 1 0.1733 3.375 FQKYTKYSKHDMNKV-p P04083;S244-p FQKYTKYSKHDMNKV 0.540233736657724 0.128799975574369 -0.123333333333333 0.231 4.93601674406729 11.7344311444186 -0.123333333333333 0.231 0.320921139502566 0.0670744137590202 -1.09231967974687 2.28420658576505 P04083 ANXA1 P04083.S244.p_ANXA1 P04083_S244s_1_1_244_244 P04083 P04083 Annexin A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28329.28329.4 8.8 2.36 8.739 4 1 1 0 772.4175 2989.7216 S244s M248m N249n Hydrogen 235 (R) RVFQKYTKYsKHDmnK (V) RVFQKY(0.0)T(0.0)KY(0.0)S(0.99)KHDM(1.0)N(1.0)K K:TMT10-Lys-Only,s:Phosphorylated S,m:Oxidized methionine,n:Deamidated ANXA1 38941.8 1 1 6896.1 8.8 HUMAN 1 -4.936 11.7344 FQMGSKSSPPSPYMG-p Q70EL4;S966-p FQMGSKSSPPSPYMG 0.329498307911047 0.663746177847037 -0.248666666666667 -0.0416666666666667 9.01297887189684 2.43710133107708 -0.248666666666667 -0.0416666666666667 0.125516873482267 0.570544951565459 -1.81060964057361 -0.603487936170885 Q70EL4 USP43 Q70EL4.S966.p_USP43 Q70EL4_S966s _1_1_966_966 Q70EL4 Q70EL4|Q70EL4-4|Q70EL4-3|Q70EL4-2 Ubiquitin carboxyl-terminal hydrolase 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17916.17916.2 10.19 10.19 1.108 6 1 1 0 1040.9914 2001.0152 S966s TMT10 965 (K) SsPPSPYMGFSGNSK (D) S(0.0)S(0.99)PPS(0.0)PY(0.0)MGFS(0.0)GNS(0.0)K K:TMT10,s:Phosphorylated S USP43 124119.2 4 9 817.1 219.69 HUMAN 1 -9.013 -2.4371 FQPKKHNSYPQPPQP-p O43896;S1060-p FQPKKHNSYPQPPQP 0.74959744833606 0.970148459727511 -0.048 0.00433333333333336 2.38164566388229 0.187085859677255 -0.048 0.00433333333333335 0.577877032059878 0.957836569419107 -0.591754382266149 0.0553571235945619 O43896 KIF1C O43896.S1060.p_KIF1C O43896_S1060s _1_1_1060_1060 O43896 O43896 Kinesin-like protein KIF1C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8814.8814.4 10.79 10.79 3.999 3 1 1 0 738.3876 2870.5578 S1060s TMT10 1057 (K) KHNsYPQPPQPYPAQRPPGPR (Y) KHNS(0.99)Y(0.0)PQPPQPY(0.0)PAQRPPGPR K:TMT10,s:Phosphorylated S KIF1C 123800.2 1 9 954.1 195.97 HUMAN 1 -2.3816 0.1871 FQPSQPLSKSSSSPE-p P49815-4;S1360-p FQPSQPLSKSSSSPE 0.187254795627764 0.00653824583586406 -0.401666666666667 0.487333333333333 14.2930429778509 31.4107023795406 -0.401666666666667 0.487333333333333 0.0372130873372618 0.000722652920313428 -2.74688218141944 6.86152818105247 P49815 TSC2 P49815.4.S1360.p_TSC2 P49815-4_S1360s _1_1_1360_1360 P49815-4 P49815-4|P49815-2|P49815-3|H3BMQ0|P49815-5|P49815-6 Isoform 4 of Tuberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21908.21908.3 13.26 13.26 1.336 6 1 1 0 980.5161 2859.5616 S1360s TMT10 1339 (R) VVSSEGGRPSVDLSFQPSQPLsK (S) VVS(0.0)S(0.0)EGGRPS(0.0)VDLS(0.0)FQPS(0.0)QPLS(0.99)K K:TMT10,s:Phosphorylated S TSC2 200147.7 2 18 214.1 435.34 HUMAN 1 -14.293 31.4107 FQPSSVLSPYERQLN-p Q7Z6J9;S178-p FQPSSVLSPYERQLN 0.893124510936072 0.0430609058980614 0.0213333333333333 -0.243666666666667 0.960478965576008 18.2993545772024 0.0213333333333333 -0.243666666666667 0.801589654476537 0.0147932822085187 0.263935399531367 -3.5201617627026 Q7Z6J9 TSEN54 Q7Z6J9.S178.p_TSEN54 Q7Z6J9_S178s _1_1_178_178 Q7Z6J9 Q7Z6J9|J3QLM6 tRNA-splicing endonuclease subunit Sen54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22992.22992.3 11.9 11.9 2.321 4 1 1 0 573.6169 1638.8689 S178s TMT10 171 (R) FQPSSVLsPYER (Q) FQPS(0.0)S(0.0)VLS(0.99)PY(0.0)ER s:Phosphorylated S TSEN54 59331.7 2 2 2262.1 90.86 HUMAN 1 0.9605 -18.2994 FQQRPYPSPGAVLRA-p O60828;S247-p FQQRPYPSPGAVLRA 0.157232608853663 0.0186573247048938 -0.345333333333333 -0.355333333333333 16.1172419703965 23.7966948695413 -0.345333333333333 -0.355333333333333 0.0244498276999891 0.00417186756167109 -3.09073444480875 -4.739783159133 O60828 PQBP1 O60828.S247.p_PQBP1 O60828_S247s _1_1_247_247 O60828 O60828|O60828-2|O60828-4|O60828-5 Polyglutamine-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23514.23514.3 17.79 14.54 7.214 5 1 1 0 960.8265 2800.4943 S247s TMT10 229 (K) TGADTTAAGPLFQQRPYPsPGAVLR (A) T(0.0)GADT(0.0)T(0.0)AAGPLFQQRPY(0.0)PS(0.99)PGAVLR s:Phosphorylated S PQBP1 30528.8 3 3 4294.1 34.06 HUMAN 1 -16.1172 -23.7967 FQSPASKSPKGAAPD-p Q9H6E5;S138-p FQSPASKSPKGAAPD 0.299702423811655 0.011511877183827 -0.250333333333333 -0.409666666666667 9.84063039779336 27.1299324061838 -0.250333333333333 -0.409666666666667 0.10373778248748 0.00193645210275204 -1.95403535939794 -5.59647579996006 Q9H6E5 TUT1 Q9H6E5.S138.p_TUT1 Q9H6E5_S138s _1_1_138_138 Q9H6E5 F5H0R1|Q9H6E5 Speckle targeted PIP5K1A-regulated poly(A) polymerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11621.11621.4 11.79 10.15 1.339 4 1 1 0 820.1988 3197.8089 S138s TMT10 130 (K) EFQSPASKsPKGAAPDSHQLAK (A) EFQS(0.0)PAS(0.0)KS(0.99)PKGAAPDS(0.0)HQLAK K:TMT10,s:Phosphorylated S TUT1 95043.4 5 3 2113.1 97.04 HUMAN 1 -9.8406 -27.1299 FQSRGSRSPDACMDK-p A0A0G2JNU3;S2451-p FQSRGSRSPDACMDK 0.857836241357698 0.0328142989576861 0.0283333333333333 -0.304 1.29823588596013 20.0188546872425 0.0283333333333333 -0.304 0.741611424369488 0.00995667958302423 0.347100846375803 -3.879363506132 A0A0G2JNU3 NotFound A0A0G2JNU3.S2451.p_NotFound A0A0G2JNU3_S2451s _1_1_2451_2451 A0A0G2JNU3 A6H8Y1|A0A0G2JNU3|A6H8Y1-6|A6H8Y1-7 Transcription factor TFIIIB component B'' homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6045.6045.3 13.19 13.19 1.16 2 1 1 0 587.9434 1681.8402 S2451s TMT10 2448 (R) GSRsPDACMDK (N) GS(0.0)RS(0.99)PDACMDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BDP1 295548.6 2 7 2021.1 102.05 HUMAN 1 1.2982 -20.0189 FQSTSVKSPKTVSPP-p Q9UHB6-4;S605-p FQSTSVKSPKTVSPP 0.0732937591551094 0.0111404332292139 -0.461 -0.396666666666667 24.3799173892805 27.3493373034008 -0.461 -0.396666666666667 0.00364760885275927 0.0018410529091185 -4.88842388784135 -5.65653393096625 Q9UHB6 LIMA1 Q9UHB6.4.S605.p_LIMA1 Q9UHB6-4_S605s _1_1_605_605 Q9UHB6-4 Q9UHB6-4|Q9UHB6-5|Q9UHB6-2|F8VQE1|Q9UHB6-3|F8VS07 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.16801.16801.5 16.68 13.73 1.106 7 1 1 0 559.3123 2712.5652 S605s TMT10 589 (R) SRPFTVAASFQSTSVKsPK (T) S(0.0)RPFT(0.0)VAAS(0.0)FQS(0.0)T(0.0)S(0.0)VKS(0.99)PK K:TMT10,s:Phosphorylated S LIMA1 85678.4 10 25 42.1 822.82 HUMAN 1 -24.3799 -27.3493 FRAFVEDSEDEDGAG-p Q8N9T8;S171-p FRAFVEDSEDEDGAG 0.40293565418922 0.611208833807347 0.139333333333333 0.0893333333333334 7.28903000256072 2.90486608722637 0.139333333333333 0.0893333333333334 0.186679659360136 0.512287066165049 1.51151754997607 0.700925790975471 Q8N9T8 KRI1 Q8N9T8.S171.p_KRI1 Q8N9T8_S171s _1_1_171_171 Q8N9T8 Q8N9T8 Protein KRI1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22050.22465.3 21.76 21.76 6.076 3 1 1 0 926.7657 2698.3096 S171s TMT10 166 (R) AFVEDsEDEDGAGEGGSSLLQK (R) AFVEDS(0.99)EDEDGAGEGGS(0.0)S(0.0)LLQK K:TMT10,s:Phosphorylated S KRI1 83053 12 3 863.1 210.23 HUMAN 1 7.289 2.9049 FRASVALTPTAPSRT-p P28290;T1156-p FRASVALTPTAPSRT 0.472567058699638 0.0949906541206792 0.109333333333333 0.221333333333333 6.00134444266957 13.5201689284698 0.109333333333333 0.221333333333333 0.251110894877082 0.0444613972886292 1.28480308534069 2.60373720425437 P28290 SSFA2 P28290.T1156.p_SSFA2 P28290_T1156t _1_1_1156_1156 P28290 P28290|P28290-3|E9PHV5 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11870.11870.3 14.6 9.73 3.976 4 1 1 0 493.9303 1399.8106 T1156t TMT10 1151 (R) ASVALtPTAPSR (T) AS(0.0)VALT(0.99)PT(0.0)APS(0.0)R t:Phosphorylated T SSFA2 139638.7 2 31 73.1 652.35 HUMAN 1 6.0013 13.5202 FRCRDRLSPWAARST-p Q6ZU80;S18-p FRCRDRLSPWAARST 0.165570038600974 0.990455751802061 -0.249666666666667 0.00233333333333333 15.6214338649937 0.0606682529266882 -0.249666666666667 0.00233333333333332 0.027406691642588 0.986127737571789 -2.9958344932307 0.0182033227446144 Q6ZU80 CEP128 Q6ZU80.S18.p_CEP128 Q6ZU80_S18s _1_1_18_18 Q6ZU80 Q6ZU80|Q6ZU80-1|Q6ZU80-3 Centrosomal protein of 128 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11295.11295.3 10.72 10.72 99 1 1 1 0 460.9042 1300.7323 S18s TMT10 15 (R) DRLsPWAAR (S) DRLS(1.0)PWAAR s:Phosphorylated S CEP128 128640.5 2 1 1261.1 161 HUMAN 1 -15.6214 0.0607 FRDAAKSSPAFGDRR-p P13716-2;S244-p FRDAAKSSPAFGDRR 0.286918447318723 0.336818229127304 0.269666666666667 -0.118666666666667 10.2278449455939 6.26225026668909 0.269666666666667 -0.118666666666667 0.0948889203931328 0.236469413016672 2.02132419469107 -1.33082016636123 P13716 ALAD P13716.2.S244.p_ALAD P13716-2_S244s _1_1_244_244 P13716-2 P13716-2 Isoform 2 of Delta-aminolevulinic acid dehydratase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7270.7270.2 11.11 4.02 1.343 2 1 1 0 573.263 1065.5526 S244s TMT10 243 (K) SsPAFGDR (R) S(0.0)S(0.99)PAFGDR s:Phosphorylated S ALAD 39603.7 9 1 3446.1 50.76 HUMAN 1 10.2278 -6.2623 FRDIEEVSQGLLSLL-p Q8NBT2;S11-p FRDIEEVSQGLLSLL 0.153876829197116 0.317873826979405 0.273333333333333 0.144 16.3347084686796 6.57954443338974 0.273333333333333 0.144 0.0232556859039583 0.219809043617703 3.13272449580392 1.38683439663496 Q8NBT2 SPC24 Q8NBT2.S11.p_SPC24 Q8NBT2_S11s _1_1_11_11 Q8NBT2 Q8NBT2|Q8NBT2-2|A0A0A0MSN0 Kinetochore protein Spc24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.34840.34840.3 10.34 10.34 3.526 2 1 1 0 708.3693 2043.1284 S11s TMT10 6 (R) DIEEVsQGLLSLLGANR (A) DIEEVS(0.99)QGLLS(0.0)LLGANR s:Phosphorylated S SPC24 22534.8 1 1 6648.1 10.34 HUMAN 1 16.3347 6.5795 FRDQDLASCDRDRSS-p Q9Y383;S347-p FRDQDLASCDRDRSS 0.293942250620987 0.280859330814252 0.174333333333333 -0.117 10.0329289685032 7.26757558275623 0.174333333333333 -0.117 0.0992446496978483 0.187604150227622 1.98743193518531 -1.50734186302481 Q9Y383 LUC7L2 Q9Y383.S347.p_LUC7L2 Q9Y383_S347s _1_1_347_347 Q9Y383 Q96HJ9-2|Q9Y383|Q9Y383-2|Q9Y383-3 Putative RNA-binding protein Luc7-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4222.4222.3 14.61 14.61 99 1 1 1 0 578.5737 1653.7398 S347s Hydrogen 340 (R) FRDQDLAsCDRDR (S) FRDQDLAS(1.0)CDRDR C:Carbamidomethylation,s:Phosphorylated S LUC7L2 46969.6 4 2 2533.1 79.6 HUMAN 1 10.0329 -7.2676 FRDQKDGYRKNEGYM-p B5ME19;Y893-p FRDQKDGYRKNEGYM 0.538851785262018 0.00819640833915464 -0.285333333333333 -1.19866666666667 4.96146209902291 29.6883863397207 -0.285333333333333 -1.19866666666667 0.319046357044493 0.00107438853692909 -1.09699106346291 -6.32797851856546 B5ME19 EIF3CL B5ME19.Y893.p_EIF3CL B5ME19_Y893y _1_1_893_893 B5ME19 B5ME19 Eukaryotic translation initiation factor 3 subunit C-like protein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.6480.6480.3 7.69 1.11 7.686 2 1 1 0 642.9837 1846.9634 Y893y TMT10 891 (K) DGyRKNEGYMR (R) DGY(0.99)RKNEGY(0.0)MR K:TMT10,y:Phosphorylated Y EIF3CL 106155.7 1 3 58.1 38.96 HUMAN 1 -4.9615 -29.6884 FRDSFSHSPGAVSSL-p Q9H6R7;S690-p FRDSFSHSPGAVSSL 0.663253821113515 0.0800986161944382 0.0963333333333333 -0.349 3.33749174248448 14.5488857974898 0.0963333333333334 -0.349 0.463714659718262 0.0350841872506747 0.788165302380227 -2.7925093143955 Q9H6R7 C2orf44 Q9H6R7.S690.p_C2orf44 Q9H6R7_S690s _1_1_690_690 Q9H6R7 Q9H6R7|Q9H6R7-3 WD repeat and coiled-coil-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13793.13793.3 17.44 17.44 2.342 5 1 1 0 653.0004 1877.0169 S690s TMT10 685 (R) DSFSHsPGAVSSLK (V) DS(0.0)FS(0.0)HS(0.99)PGAVS(0.0)S(0.0)LK K:TMT10,s:Phosphorylated S WDCP 80332.2 2 3 2288.1 89.58 HUMAN 1 3.3375 -14.5489 FRDWYPHSRLFDQAF-p P04792;S26-p FRDWYPHSRLFDQAF 0.918430174900821 0.220565520161417 -0.0166666666666667 0.147 0.719331050486864 8.64303377207608 -0.0166666666666667 0.147 0.847357923746606 0.136677372974468 -0.201913849099057 1.7459698049564 P04792 HSPB1 P04792.S26.p_HSPB1 P04792_S26s _1_1_26_26 P04792 P04792|F8WE04 Heat shock protein beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23880.23880.3 17.53 11.89 5.175 3 1 1 0 738.0035 2132.03 S26s TMT10 13 (R) GPSWDPFRDWYPHsR (L) GPS(0.0)WDPFRDWY(0.0)PHS(0.99)R s:Phosphorylated S HSPB1 22839.1 1 3 357.1 346.69 HUMAN 1 -0.7193 8.643 FREALRVSEPKAPKA-p O60264;S755-p FREALRVSEPKAPKA 0.188594048062456 0.0178038368389318 -0.352 -0.365333333333333 14.2149467140636 24.0968039080731 -0.352 -0.365333333333334 0.0378883182442384 0.00389331559338942 -2.73246911420183 -4.81287622953208 O60264 SMARCA5 O60264.S755.p_SMARCA5 O60264_S755s _1_1_755_755 O60264 O60264 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11446.11446.4 12.59 12.59 99 1 1 1 0 523.8094 2012.2471 S755s TMT10 750 (R) EALRVsEPKAPK (A) EALRVS(1.0)EPKAPK K:TMT10,s:Phosphorylated S SMARCA5 122587.8 2 10 1232.1 163.75 HUMAN 1 -14.2149 -24.0968 FREEAYHSRSKSPLP-p Q1KMD3;S224-p FREEAYHSRSKSPLP 0.667849202504094 0.0260842181730162 0.0616666666666667 0.395333333333333 3.27942214077451 21.5325226633126 0.0616666666666667 0.395333333333333 0.469956635467157 0.00702664048582687 0.776616505719773 4.21150797113103 Q1KMD3 HNRNPUL2 Q1KMD3.S224.p_HNRNPUL2 Q1KMD3_S224s _1_1_224_224 Q1KMD3 Q1KMD3|H3BQZ7 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10714.10714.4 20.68 20.68 4.658 4 1 1 0 508.2319 1949.9343 S224s TMT10 213 (R) AYYEFREEAYHsR (S) AY(0.0)Y(0.0)EFREEAY(0.0)HS(0.99)R s:Phosphorylated S HNRNPUL2 85673.7 2 5 294.1 379.87 HUMAN 1 3.2794 21.5325 FREGRRASDTSLTQG-p Q9H0K1;S587-p FREGRRASDTSLTQG 0.993614071836454 0.0193073271035201 0.00133333333333333 0.334 0.0590058969908535 23.5536209927131 0.00133333333333333 0.334 0.986505271513444 0.00441202435080231 0.0177094720982166 4.68112920851778 Q9H0K1 SIK2 Q9H0K1.S587.p_SIK2 Q9H0K1_S587s _1_1_587_587 Q9H0K1 Q9H0K1 Serine/threonine-protein kinase SIK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18997.18997.3 16.65 16.65 1.133 4 1 1 0 644.3364 1851.0286 S587s TMT10 585 (R) RAsDTSLTQGIVAFR (Q) RAS(0.99)DT(0.0)S(0.0)LT(0.0)QGIVAFR s:Phosphorylated S SIK2 104769.2 3 7 1626.1 126.2 HUMAN 1 0.059 23.5536 FRERDIPSLPPLPPL-p P49750-4;S1330-p FRERDIPSLPPLPPL 0.726935837841591 0.0614276915954794 -0.0736666666666667 0.276 2.62619872027237 16.1323303268902 -0.0736666666666667 0.276 0.54623575951281 0.0243650309457952 -0.643409774727691 3.09143366465275 P49750 YLPM1 P49750.4.S1330.p_YLPM1 P49750-4_S1330s _1_1_1330_1330 P49750-4 P49750-4|P49750-3 Isoform 4 of YLP motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.37101.37101.3 16.85 16.85 99 1 1 1 0 785.1097 2273.3471 S1330s TMT10 1327 (R) DIPsLPPLPPLPPLPPLDR (Y) DIPS(1.0)LPPLPPLPPLPPLDR s:Phosphorylated S YLPM1 241869.3 1 15 669.1 249.34 HUMAN 1 -2.6262 16.1323 FREVDEISPEDDQRA-p Q96T37;S365-p FREVDEISPEDDQRA 0.505584947622533 0.046726575691255 -0.105333333333333 0.414 5.46826166762789 17.7986646062524 -0.105333333333333 0.414 0.283905517779618 0.0166009728526466 -1.18921955370751 3.41887337078781 Q96T37 RBM15 Q96T37.S365.p_RBM15 Q96T37_S365s _1_1_365_365 Q96T37 Q96T37|Q96T37-3 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16947.16947.3 19.26 15.13 99 1 1 1 0 899.0945 2615.2899 S365s TMT10 349 (R) VGAGAGAAPFREVDEIsPEDDQR (A) VGAGAGAAPFREVDEIS(1.0)PEDDQR s:Phosphorylated S RBM15 107414.9 1 13 55.1 724.11 HUMAN 1 -5.4683 17.7987 FRFMKALSYASLDKE-p Q6R327-3;S1409-p FRFMKALSYASLDKE 0.174396271167394 0.952727517457888 0.216666666666667 -0.008 15.1076161547564 0.298498486848538 0.216666666666667 -0.008 0.0308488077868088 0.933577016357878 2.89865914828569 -0.0872862550525641 Q6R327 RICTOR Q6R327.3.S1409.p_RICTOR Q6R327-3_S1409s _1_1_1409_1409 Q6R327-3 Q6R327-3 Isoform 3 of Rapamycin-insensitive companion of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27880.27880.3 12.82 12.82 1.155 5 1 1 0 1043.225 3047.6777 S1409s TMT10 1407 (K) ALsYASLDKEDLLSPINQNTLQR (S) ALS(0.99)Y(0.0)AS(0.0)LDKEDLLS(0.0)PINQNT(0.0)LQR K:TMT10,s:Phosphorylated S RICTOR 197118.3 2 19 452.1 308.36 HUMAN 1 15.1076 -0.2985 FRGGSDGYGSGRGFG-p P22626;Y234-p FRGGSDGYGSGRGFG 0.525895441449244 0.311311759832195 0.231 -0.426 5.16251273757882 6.69793097643957 0.231 -0.426 0.304613205100428 0.213898087928317 1.13375771944122 -1.40765474603399 P22626 HNRNPA2B1 P22626.Y234.p_HNRNPA2B1 P22626_Y234y _1_1_234_234 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11285.11328.3 18.27 12.08 1.255 4 1 1 0 860.7134 2500.1551 Y234y TMT10 214 (R) GGGGNFGPGPGSNFRGGSDGyGSGR (G) GGGGNFGPGPGS(0.0)NFRGGS(0.0)DGY(0.99)GS(0.0)GR y:Phosphorylated Y HNRNPA2B1 37486.1 2 2 2.1 134.47 HUMAN 1 5.1625 -6.6979 FRGRRDVSGSWERDQ-p Q86VR2;S26-p FRGRRDVSGSWERDQ 0.0848925536936968 0.0285989114629691 -0.526 -0.398 22.9220588388561 20.9053814463741 -0.526 -0.398 0.00510263044693717 0.00811823942273552 -4.53602625712145 -4.07197326004033 Q86VR2 FAM134C Q86VR2.S26.p_FAM134C Q86VR2_S26s _1_1_26_26 Q86VR2 Q86VR2|K7ENF4|K7EJ34|K7ELM8 Reticulophagy regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10594.10594.2 11.76 4.84 1.113 2 1 1 0 622.7796 1164.5847 S26s TMT10 24 (R) DVsGSWER (D) DVS(0.99)GS(0.0)WER s:Phosphorylated S RETREG3 51794.7 1 2 1136.1 173.56 HUMAN 1 -22.9221 -20.9054 FRGSWDCSSPEGNGS-p Q9UN79;S76-p FRGSWDCSSPEGNGS 0.431693145064168 0.183970635400432 0.118666666666667 0.168333333333333 6.71713204541791 9.6670647874601 0.118666666666667 0.168333333333333 0.212954487131147 0.10796761831191 1.41140203785128 1.92317305010949 Q9UN79 SOX13 Q9UN79.S76.p_SOX13 Q9UN79_S76sS77sS83s_3_3_76_83 Q9UN79 Q9UN79 Transcription factor SOX-13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14110.14110.5 8.87 8.83 2.537 7 3 3 0 821.3615 3861.8917 S76s S77s N81n S83s TMT10 71 (R) GSWDCssPEGnGsPEPKRPGVSEAASGSQEK (L) GS(0.0)WDCS(0.99)S(0.99)PEGN(1.0)GS(0.99)PEPKRPGVS(0.0)EAAS(0.0)GS(0.0)QEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated SOX13 69740.6 2 15 1036.1 185.73 HUMAN 1 6.7171 9.6671 FRGTAGKSPDLSSQK-p Q9Y2I7;S1754-p FRGTAGKSPDLSSQK 0.86766673089487 0.306002123298366 -0.0253333333333333 0.109666666666667 1.20093608637588 6.79453000284568 -0.0253333333333333 0.109666666666667 0.758414087432492 0.209192928520632 -0.323548471163124 1.42461456860365 Q9Y2I7 PIKFYVE Q9Y2I7.S1754.p_PIKFYVE Q9Y2I7_S1754s _1_1_1754_1754 Q9Y2I7 Q9Y2I7 1-phosphatidylinositol 3-phosphate 5-kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8942.8942.3 11.43 11.43 1.222 4 1 1 0 681.7081 1963.1427 S1754s TMT10 1749 (R) GTAGKsPDLSSQK (R) GT(0.0)AGKS(0.99)PDLS(0.0)S(0.0)QK K:TMT10,s:Phosphorylated S PIKFYVE 239756.4 6 12 1398.1 146.55 HUMAN 1 -1.2009 6.7945 FRHKMAQYAQRASVA-p Q9Y2L1;Y826-p FRHKMAQYAQRASVA 0.934979371920407 0.00750394169295586 0.0153333333333333 0.537 0.572690835416255 30.3798613707445 0.0153333333333333 0.537 0.876457610477324 0.000916249736865141 0.162967151599216 6.53799865724866 Q9Y2L1 DIS3 Q9Y2L1.Y826.p_DIS3 Q9Y2L1_Y826y _1_1_826_826 Q9Y2L1 Q9Y2L1|Q9Y2L1-2|G3V1J5 Exosome complex exonuclease RRP44 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.6732.6767.2 13.65 4.98 99 1 1 1 0 588.7751 1096.5771 Y826y TMT10 823 (K) MAQyAQR (A) MAQY(1.0)AQR y:Phosphorylated Y DIS3 110084.8 2 2 148.1 22.7 HUMAN 1 0.5727 30.3799 FRKGGQLSPVCNGGI-p O96020;S383-p FRKGGQLSPVCNGGI 0.819468419267237 0.00609478787414265 0.0376666666666667 -0.688 1.6661873933158 31.9593038987429 0.0376666666666667 -0.688 0.681367258397051 0.000636897596736119 0.433538659411581 -7.03898895202952 O96020 CCNE2 O96020.S383.p_CCNE2 O96020_S383s_1_1_383_383 O96020 O96020|O96020-2 G1/S-specific cyclin-E2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16202.16202.3 17.77 16.43 5.466 2 1 1 0 756.3799 2171.1717 S383s M391m TMT10 379 (K) GGQLsPVCNGGImTPPK (S) GGQLS(0.99)PVCNGGIM(1.0)T(0.0)PPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,m:Oxidized methionine CCNE2 47327 10 4 1638.1 124.86 HUMAN 1 1.6662 -31.9593 FRKLQDASRSAQALV-p A0A087WTU7;S781-p FRKLQDASRSAQALV 0.207422631751664 0.363702374721809 0.205666666666667 0.107 13.185250125581 5.82295052048831 0.205666666666667 0.107 0.0480258419659022 0.261640486472229 2.54450221110708 1.2526689179713 A0A087WTU7 NotFound A0A087WTU7.S781.p_NotFound A0A087WTU7_S781sS783sS800s_3_3_781_800 A0A087WTU7 A0A087WTU7|E9PDN5|A0A087WV90|P11532-4 Dystrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4140.4140.5 8.61 2.45 99 3 3 3 0 724.3325 3359.7993 S781s S783s M791m N793n N797n S800s Hydrogen 776 (R) KLQDAsRsAQALVEQmVnEGVnADsIK (Q) KLQDAS(1.0)RS(1.0)AQALVEQM(1.0)VN(1.0)EGVN(1.0)ADS(1.0)IK K:TMT10-Lys-Only,s:Phosphorylated S,m:Oxidized methionine,n:Deamidated DMD 428951.2 1 6 2745.1 71.99 HUMAN 1 13.1853 5.823 FRKTNHSSPEAQSKQ-p A0A0D9SEY1;S580-p FRKTNHSSPEAQSKQ 0.081833793760253 0.0212621676177838 0.356333333333333 0.399 23.2323493541497 22.8723618344868 0.356333333333333 0.399 0.00475078158714483 0.00516135601625258 4.60957046270863 4.51929325011204 A0A0D9SEY1 NotFound A0A0D9SEY1.S580.p_NotFound A0A0D9SEY1_S580s _1_1_580_580 A0A0D9SEY1 O95819-3|A0A0D9SEY1|O95819-6|E7EN19|O95819-2 Mitogen-activated protein kinase kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3845.3845.2 10.28 10.28 1.106 4 1 1 0 862.4244 1643.8753 S580s TMT10 576 (K) TNHSsPEAQSK (Q) T(0.0)NHS(0.0)S(0.99)PEAQS(0.0)K K:TMT10,s:Phosphorylated S MAP4K4 151879.6 1 3 131.2 535.29 HUMAN 1 23.2323 22.8724 FRLKAYASPAKLESI-p Q8NB37-2;S74-p FRLKAYASPAKLESI 0.844605466455093 0.889370351481175 -0.0293333333333333 0.016 1.41712551124136 0.715414183986955 -0.0293333333333333 0.016 0.721584920539696 0.848122493672637 -0.375468013468175 0.200867130071928 Q8NB37 PDDC1 Q8NB37.2.S74.p_PDDC1 Q8NB37-2_S74s _1_1_74_74 Q8NB37-2 Q8NB37-2 Isoform 2 of Glutamine amidotransferase-like class 1 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16433.16433.3 11.39 6.5 1.702 3 1 1 0 696.3714 2007.1275 S74s TMT10 71 (K) AYAsPAKLESIDGAR (Y) AY(0.0)AS(0.99)PAKLES(0.0)IDGAR K:TMT10,s:Phosphorylated S GATD1 27411.5 1 1 6489.1 11.39 HUMAN 1 -1.4171 0.7154 FRLKKKDSEEEKEGN-p A0A0C4DFM7;S1324-p FRLKKKDSEEEKEGN 0.200149573252671 0.00553108384972809 -0.790666666666667 0.501666666666667 13.5935867409137 32.7299942132032 -0.790666666666667 0.501666666666667 0.0437160914615209 0.000533335606135087 -2.61859840109177 7.29472537774452 A0A0C4DFM7 ZCCHC11 A0A0C4DFM7.S1324.p_ZCCHC11 A0A0C4DFM7_S1324s _1_1_1324_1324 A0A0C4DFM7 A0A0C4DFM7|Q5TAX3 Terminal uridylyltransferase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5717.5717.5 15.01 15.01 99 1 1 1 0 607.5259 2953.6339 S1324s TMT10 1321 (K) KKDsEEEKEGNEEEK (D) KKDS(1.0)EEEKEGNEEEK K:TMT10,s:Phosphorylated S ZCCHC11 188216.3 2 10 850.1 212.61 HUMAN 1 -13.5936 32.73 FRLQQALSDAENEIM-p Q15643;S395-p FRLQQALSDAENEIM 0.865233539072184 0.453314903742841 -0.056 -0.275666666666667 1.2226529134974 4.57892318422138 -0.0560000000000001 -0.275666666666667 0.754631115968416 0.348423694586813 -0.328832397231189 -1.02610263199778 Q15643 TRIP11 Q15643.S395.p_TRIP11 Q15643_S395s_1_1_395_395 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29358.29358.3 9.88 9.88 99 1 1 1 0 643.3132 1846.953 S395s N399n TMT10 390 (R) LQQALsDAEnEIMR (L) LQQALS(1.0)DAEN(1.0)EIMR s:Phosphorylated S,n:Deamidated TRIP11 228267 1 2 463.1 303.86 HUMAN 1 -1.2227 -4.5789 FRLTSTDTIPKSKFL-p P11171;T494-p FRLTSTDTIPKSKFL 0.362510112316067 0.0485486388378928 0.137666666666667 0.250333333333333 8.18828640487885 17.5694045995661 0.137666666666667 0.250333333333333 0.151764906791443 0.017500866020801 1.66780839355821 3.37296080910127 P11171 EPB41 P11171.T494.p_EPB41 P11171_T494t _1_1_494_494 P11171 P11171 Protein 4.1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16115.16115.2 10.24 6.9 1.16 4 1 1 0 757.4169 1433.8616 T494t TMT10 489 (R) LTSTDtIPK (S) LT(0.0)S(0.0)T(0.0)DT(0.99)IPK K:TMT10,t:Phosphorylated T EPB41 97585.6 1 24 469.3 302.69 HUMAN 1 8.1883 17.5694 FRNGDTASPKEYTAG-p P07237;S112-p FRNGDTASPKEYTAG 0.782792784230712 0.320661489051755 -0.0393333333333333 -0.114 2.04389755694058 6.53092106709895 -0.0393333333333333 -0.114 0.624611885945865 0.222283841322364 -0.518501670417704 -1.37827126805241 P07237 P4HB P07237.S112.p_P4HB P07237_S112s_1_1_112_112 P07237 P07237|H7BZ94 Protein disulfide-isomerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13356.13356.3 7.3 3.42 1.47 2 1 1 0 593.6342 1697.9375 N107n S112s TMT10 104 (K) FFRnGDTAsPK (E) FFRN(1.0)GDT(0.0)AS(0.99)PK K:TMT10,n:Deamidated,s:Phosphorylated S P4HB 57514.7 1 4 2940.1 65.3 HUMAN 1 -2.0439 -6.5309 FRPMKRITWNTWKER-p Q9GZT8;T104-p FRPMKRITWNTWKER 0.378645044751783 0.737269330398638 -0.135666666666667 0.0346666666666667 7.79233128536825 1.82472577837807 -0.135666666666667 0.0346666666666667 0.166251997291313 0.656942595745359 -1.59911372479925 0.469573859892189 Q9GZT8 NIF3L1 Q9GZT8.T104.p_NIF3L1 Q9GZT8_T104t _1_1_104_104 Q9GZT8 Q9GZT8|Q9GZT8-2|Q9GZT8-3 NIF3-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19713.19713.3 8.57 8.57 3.54 2 1 1 0 548.3005 1562.9208 T104t TMT10 102 (K) RItWNTWK (E) RIT(0.99)WNT(0.0)WK K:TMT10,t:Phosphorylated T NIF3L1 42366.7 2 1 6944.1 8.57 HUMAN 1 -7.7923 1.8247 FRQDVPPSPPQHQRM-p Q8TEW8;S1162-p FRQDVPPSPPQHQRM 0.215431595213222 0.535134160750073 0.196666666666667 0.0663333333333334 12.8427721766033 3.65322806206653 0.196666666666667 0.0663333333333334 0.0519664180031228 0.431198452721416 2.48277353785251 0.850099885303542 Q8TEW8 PARD3B Q8TEW8.S1162.p_PARD3B Q8TEW8_S1162s _1_1_1162_1162 Q8TEW8 Q8TEW8|Q8TEW8-2|Q8TEW8-3|Q8TEW8-6|Q8TEW8-5|A0A087X1S9|A0A087WYL6|A0A087WZG6 Partitioning defective 3 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7904.8341.3 14.35 9.34 99 1 1 1 0 718.0269 2072.0987 S1162s TMT10 1153 (K) GPFRQDVPPsPPQHQR (M) GPFRQDVPPS(1.0)PPQHQR s:Phosphorylated S PARD3B 133176.7 4 46 65.4 692.2 HUMAN 1 12.8428 3.6532 FRQPRYSSGGNFETP-p Q16625;S370-p FRQPRYSSGGNFETP 0.174532422087206 0.0136990633119768 -0.226666666666667 -0.388 15.0991218035433 25.8855299139061 -0.226666666666667 -0.388 0.0309092039115824 0.00257897426604567 -2.89706230711141 -5.26473106400972 Q16625 OCLN Q16625.S370.p_OCLN Q16625_S370s _1_1_370_370 Q16625 Q16625|A0A0G2JMZ8|Q16625-3|Q16625-2|Q16625-4|Q16625-5 Occludin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12896.12896.2 11.63 4.85 1.148 5 1 1 0 906.4343 1731.8954 S370s TMT10 368 (R) YSsGGNFETPSK (R) Y(0.0)S(0.0)S(0.99)GGNFET(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S OCLN 59542.1 5 5 840.1 214.78 HUMAN 1 -15.0991 -25.8855 FRQRAADSSDSDGAE-p P16383;S16-p FRQRAADSSDSDGAE 0.992821359885708 0.542991428044876 0.00666666666666667 -0.161333333333333 0.0655242340753385 3.5666600473996 0.00666666666666672 -0.161333333333333 0.985025733804793 0.439879776034024 0.0196513882080203 -0.833203413177039 P16383 GCFC2 P16383.S16.p_GCFC2 P16383_S16sS17sS19s_3_3_16_19 P16383 P16383|P16383-2|P16383-4|P16383-3 GC-rich sequence DNA-binding factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8342.8926.3 14 14 3.988 4 3 3 0 828.9728 2245.0054 S16s S17s S19s TMT10 13 (R) AADssDsDGAEESPAEPGAPR (E) AADS(0.99)S(0.99)DS(0.99)DGAEES(0.0)PAEPGAPR s:Phosphorylated S GCFC2 89953.6 2 8 2330.1 87.66 HUMAN 1 0.0655 -3.5667 FRQSLLGSRRGRSSL-p V9GYM8;S182-p FRQSLLGSRRGRSSL 0.177952626351024 0.708070280097085 0.31 -0.087 14.8310254319642 2.06150525584026 0.31 -0.087 0.0328773993424828 0.622084634530341 2.8468195219696 -0.522318808265201 V9GYM8 NotFound V9GYM8.S182.p_NotFound V9GYM8_S182s _1_1_182_182 V9GYM8 V9GYM8|Q92974|Q92974-2|Q92974-3 Rho guanine nucleotide exchange factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7115.7115.3 8.07 2.42 2.652 2 1 1 0 409.2254 1145.6952 S182s TMT10 177 (R) QSLLGsRR (G) QS(0.0)LLGS(0.99)RR s:Phosphorylated S ARHGEF2 117095.6 1 7 380.1 335.31 HUMAN 1 14.831 -2.0615 FRREVNDSMKNSTYG-p E7ESC6;S1073-p FRREVNDSMKNSTYG 0.193166030157494 0.660708958260296 0.232 0.0553333333333334 13.9380953007388 2.46331544938855 0.232 0.0553333333333334 0.0403822459849887 0.567111501274236 2.68155970357549 0.609049218102061 E7ESC6 NotFound E7ESC6.S1073.p_NotFound E7ESC6_S1073s _1_1_1073_1073 E7ESC6 E7ESC6|Q9UIA9 Exportin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17088.17088.3 9.98 9.98 2.472 6 1 1 0 921.0692 2681.2257 S1073s TMT10 1069 (R) EVNDsMKNSTYGVNSNDMMS (-) EVNDS(0.99)MKNS(0.0)T(0.0)Y(0.0)GVNS(0.0)NDMMS(0.0) K:TMT10,s:Phosphorylated S XPO7 125433.7 1 3 5060.1 23.41 HUMAN 1 13.9381 2.4633 FRRGLDDSTGGTPLT-p Q9NXR1;S239-p FRRGLDDSTGGTPLT 0.502031518920472 0.883929070618543 -0.100666666666667 -0.0326666666666667 5.51969207825704 0.753370545995033 -0.100666666666667 -0.0326666666666667 0.280563255474127 0.840742390818877 -1.19849962863013 -0.210795855611904 Q9NXR1 NDE1 Q9NXR1.S239.p_NDE1 Q9NXR1_S239s _1_1_239_239 Q9NXR1 Q9NXR1|Q9NXR1-2 Nuclear distribution protein nudE homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15134.15134.2 12.63 12.63 1.165 4 1 1 0 919.4496 1757.9231 S239s TMT10 235 (R) GLDDsTGGTPLTPAAR (I) GLDDS(0.99)T(0.0)GGT(0.0)PLT(0.0)PAAR s:Phosphorylated S NDE1 38864.4 2 3 2022.1 102 HUMAN 1 -5.5197 -0.7534 FRRGRRRSLALVAHT-p F5H269;S324-p FRRGRRRSLALVAHT 0.629008964028517 0.256371347448174 0.0953333333333333 -0.134333333333333 3.74111049352921 7.78546781063731 0.0953333333333334 -0.134333333333333 0.422560551470282 0.166514945258798 0.867307451754944 -1.59742947530579 F5H269 DMXL1 F5H269.S324.p_DMXL1 F5H269_S324s _1_1_324_324 F5H269 F5H269|Q9Y485 DmX-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11751.11751.5 18.13 18.13 4.109 3 1 1 0 565.289 2742.4538 S324s TMT10 324 (R) sLALVAHTGYLPHQQDPHHVHR (N) S(0.99)LALVAHT(0.0)GY(0.0)LPHQQDPHHVHR s:Phosphorylated S DMXL1 344060.7 1 2 523.1 283.18 HUMAN 1 3.7411 -7.7855 FRRGTGQSDDSDIWD-p Q16637;S28-p FRRGTGQSDDSDIWD 0.735843734421637 0.971438350726511 0.0461666666666667 0.00366666666666667 2.52337090261171 0.178031520863518 0.0461666666666667 0.00366666666666667 0.559323297964383 0.959835587121762 0.621821913566496 0.0527296235031263 Q16637 SMN1 Q16637.S28.p_SMN1 Q16637_S28sS31s_2_2_28_31 Q16637 Q16637|E7EQZ4|Q16637-3|A0A1W2PRV5|Q16637-2|Q16637-4 Survival motor neuron protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31295.31707.3 14.3 13.04 1.113 4 2 2 0 852.384 2395.2029 S28s S31s TMT10 24 (R) GTGQsDDsDIWDDTALIK (A) GT(0.0)GQS(0.99)DDS(0.99)DIWDDT(0.0)ALIK K:TMT10,s:Phosphorylated S SMN1 32304.6 7 7 1780.1 115.32 HUMAN 2 2.5234 0.178 FRRRRGDSESEEDEQ-p Q9NZ63;S15-p FRRRRGDSESEEDEQ 0.780774653521955 0.88733109138329 0.0466666666666667 -0.0166666666666666 2.06630296873612 0.730421534959931 0.0466666666666667 -0.0166666666666666 0.621397788243158 0.845196804676879 0.523435750600349 -0.204800320009919 Q9NZ63 C9orf78 Q9NZ63.S15.p_C9orf78 Q9NZ63_S15sS17s_2_2_15_17 Q9NZ63 Q9NZ63 Telomere length and silencing protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18114.18114.5 19.56 19.56 19.556 4 2 2 0 799.5642 3833.8587 S15s S17s Hydrogen 12 (R) RGDsEsEEDEQDSEEVRLKLEETREVQNLR (K) RGDS(0.99)ES(0.99)EEDEQDS(0.0)EEVRLKLEET(0.0)REVQNLR K:TMT10-Lys-Only,s:Phosphorylated S C9orf78 33744.5 15 4 987.1 191.91 HUMAN 1 2.0663 -0.7304 FRRSDSMTFLGCIPP-p O95071;T2030-p FRRSDSMTFLGCIPP 0.537347398958984 0.193862466830797 0.0906666666666667 0.129333333333333 4.98613584517339 9.36874562603223 0.0906666666666667 0.129333333333333 0.317238885503914 0.115644621064241 1.10151680304711 1.87151199585555 O95071 UBR5 O95071.T2030.p_UBR5 O95071_T2030t_1_1_2030_2030 O95071 O95071|O95071-2|E7EMW7 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.38308.38308.4 12.35 12.35 1.147 3 1 1 0 1131.3253 4441.2998 T2030t N2038n TMT10 2025 (R) RSDSMtFLGCIPPnPFEVPLAEAIPLADQPHLLQPNAR (K) RS(0.0)DS(0.0)MT(0.99)FLGCIPPN(0.99)PFEVPLAEAIPLADQPHLLQPN(0.0)AR C:Carbamidomethylation,t:Phosphorylated T,n:Deamidated UBR5 312542 52 22 80.1 636.57 HUMAN 1 4.9861 9.3687 FRRVRSGSGISVISS-p Q15811;S315-p FRRVRSGSGISVISS 0.396994143818877 0.198612328512972 -0.12 0.145666666666667 7.4033684844783 9.23794352519191 -0.12 0.145666666666667 0.181829000541544 0.119180621949667 -1.53145221100725 1.8488757208729 Q15811 ITSN1 Q15811.S315.p_ITSN1 Q15811_S315s _1_1_315_315 Q15811 Q15811|Q15811-8|Q15811-9|Q15811-4|Q15811-2|Q15811-7|Q15811-6|Q15811-13|A8CTZ0|D6PAW0|Q15811-10|F8W7U0|Q15811-3|Q15811-11|Q15811-12|Q15811-5 Intersectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15264.15264.2 14.13 9.34 1.893 7 1 1 0 944.9642 1808.9551 S315s TMT10 313 (R) SGsGISVISSTSVDQR (L) S(0.0)GS(0.99)GIS(0.0)VIS(0.0)S(0.0)T(0.0)S(0.0)VDQR s:Phosphorylated S ITSN1 196273.9 7 2 790.1 224.94 HUMAN 1 -7.4034 9.2379 FRSKRSYSLSELSVL-p Q9P0V3;S246-p FRSKRSYSLSELSVL 0.489972447242158 0.16493129534533 -0.0916666666666667 0.219 5.71190921558681 10.2922363461085 -0.0916666666666667 0.219 0.268416419241476 0.093492412247648 -1.23306774807268 2.0316819781015 Q9P0V3 SH3BP4 Q9P0V3.S246.p_SH3BP4 Q9P0V3_S246s _1_1_246_246 Q9P0V3 Q9P0V3|Q9P0V3-2 SH3 domain-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28224.28224.2 15.96 15.96 1.212 5 1 1 0 982.0302 1883.089 S246s TMT10 244 (R) SYsLSELSVLQAK (S) S(0.0)Y(0.0)S(0.99)LS(0.0)ELS(0.0)VLQAK K:TMT10,s:Phosphorylated S SH3BP4 108463.7 11 10 782.1 225.91 HUMAN 1 -5.7119 10.2922 FRSSSVKSLSQEMRC-p A2A2Y4;S27-p FRSSSVKSLSQEMRC 0.7322396694563 0.798731294120568 -0.127 0.0363333333333334 2.56614454800708 1.36445641371047 -0.127 0.0363333333333334 0.553841564235485 0.730389226589173 -0.630824499453998 0.362917638109047 A2A2Y4 FRMD3 A2A2Y4.S27.p_FRMD3 A2A2Y4_S27s _1_1_27_27 A2A2Y4 A2A2Y4|A2A2Y4-2 FERM domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9587.9587.2 8.01 8.01 2.077 2 1 1 0 580.2733 1079.5717 S27s TMT10 27 (K) sLSQEMR (C) S(0.99)LS(0.0)QEMR s:Phosphorylated S FRMD3 69683.6 1 2 3462.1 50.35 HUMAN 1 -2.5661 1.3645 FRSVTPDSLGHTPPA-p P35568;S449-p FRSVTPDSLGHTPPA 0.154754532748189 0.162419253836632 -0.247666666666667 -0.175666666666667 16.2771364198762 10.3780647046392 -0.247666666666667 -0.175666666666667 0.0235660262993701 0.0916628865653403 -3.12158584775242 -2.04661348950031 P35568 IRS1 P35568.S449.p_IRS1 P35568_S449sT453t_2_2_449_453 P35568 P35568 Insulin receptor substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22978.22978.4 9.88 9.88 1.925 6 2 2 0 905.9216 3460.7241 S449s T453t TMT10 444 (R) SVTPDsLGHtPPARGEEELSNYICMGGK (G) S(0.0)VT(0.0)PDS(0.99)LGHT(0.99)PPARGEEELS(0.0)NY(0.0)ICMGGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T IRS1 132786.8 3 23 229.1 423.14 HUMAN 1 -16.2771 -10.3781 FRVGHMSSVELDDEL-p P51798;S61-p FRVGHMSSVELDDEL 0.675922624629322 0.20268461476253 0.0746666666666667 0.141333333333333 3.18898384530871 9.11978208337904 0.0746666666666667 0.141333333333333 0.479845708969119 0.122467764856514 0.758542486434585 1.828432507451 P51798 CLCN7 P51798.S61.p_CLCN7 P51798_S60sS61s_2_2_60_61 P51798 P51798 H(+)/Cl(-) exchange transporter 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29368.29368.4 17.33 17.33 99 2 2 2 0 884.6558 3375.6641 S60s S61s TMT10 56 (R) VGHMssVELDDELLDPDMDPPHPFPK (E) VGHMS(1.0)S(1.0)VELDDELLDPDMDPPHPFPK K:TMT10,s:Phosphorylated S CLCN7 89191 1 6 2487.1 81.4 HUMAN 1 3.189 9.1198 FRVKVDPSHDASKVK-p O75369-8;S842-p FRVKVDPSHDASKVK 0.286213139559986 0.23951148597751 -0.243666666666667 0.155333333333333 10.2521069179271 8.17655646610604 -0.243666666666667 0.155333333333333 0.0943602989652865 0.152175365450857 -2.02554609553201 1.66523515356961 O75369 FLNB O75369.8.S842.p_FLNB O75369-8_S842s _1_1_842_842 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|O75369-4|O75369-5 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8086.8086.3 10.02 7.81 2.182 2 1 1 0 650.6938 1870.1001 S842s TMT10 837 (R) VKVDPsHDASK (V) VKVDPS(0.99)HDAS(0.0)K K:TMT10,s:Phosphorylated S FLNB 283797.6 1 15 67.1 680.07 HUMAN 1 -10.2521 8.1766 FRVVPFISVEHIPKG-p P56159-2;S139-p FRVVPFISVEHIPKG 0.540716629644627 0.0119524323479149 0.189666666666667 0.415666666666667 4.92685693670067 26.8617417269319 0.189666666666667 0.415666666666667 0.321598716143588 0.00205980366859692 1.0906370461052 5.52371234301615 P56159 GFRA1 P56159.2.S139.p_GFRA1 P56159-2_S139s _1_1_139_139 P56159-2 P56159-2 Isoform 2 of GDNF family receptor alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26917.26917.3 12.49 8.11 99 1 1 1 0 635.0335 1823.1195 S139s TMT10 134 (R) VVPFIsVEHIPK (G) VVPFIS(1.0)VEHIPK K:TMT10,s:Phosphorylated S GFRA1 52606 2 1 6302.1 12.49 HUMAN 1 4.9269 26.8617 FRVYNLLTPDSKMGE-p Q9UHF7-2;T764-p FRVYNLLTPDSKMGE 0.27311537895585 0.00171671240553537 -0.208333333333333 -0.880666666666667 10.6747579221307 43.8774664688337 -0.208333333333333 -0.880666666666667 0.0856099429791287 4.09499478590922e-05 -2.09922244833168 -12.0208295472092 Q9UHF7 TRPS1 Q9UHF7.2.T764.p_TRPS1 Q9UHF7-2_T764t _1_1_764_764 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3|E5RJ97 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22095.22095.2 14.83 14.83 2.514 3 1 1 0 844.457 1607.9409 T764t TMT10 759 (R) VYNLLtPDSK (M) VY(0.0)NLLT(0.99)PDS(0.0)K K:TMT10,t:Phosphorylated T TRPS1 145246 4 22 14.1 1150.14 HUMAN 1 -10.6748 -43.8775 FSAPRHGSLGFLPRK-p P39023;S13-p FSAPRHGSLGFLPRK 0.480199545319759 0.180527652687909 0.124666666666667 0.156666666666667 5.86563288221301 9.78001888827956 0.124666666666667 0.156666666666667 0.259081684313438 0.105195729865417 1.26058999175011 1.94275009523761 P39023 RPL3 P39023.S13.p_RPL3 P39023_S13s _1_1_13_13 P39023 P39023|F8WCR1 60S ribosomal protein L3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15728.15728.2 11.83 6.25 99 1 1 1 0 646.8409 1212.7051 S13s TMT10 11 (R) HGsLGFLPR (K) HGS(1.0)LGFLPR s:Phosphorylated S RPL3 46393.3 4 1 5292.1 20.93 HUMAN 1 5.8656 9.78 FSASAKSSPVCSTAP-p Q96BY7;S240-p FSASAKSSPVCSTAP 0.688287844973563 0.00123467326444358 -0.0926666666666667 0.978 3.04620647447258 47.705205395718 -0.0926666666666667 0.978 0.495883151417635 1.69620937964697e-05 -0.729781828667344 14.2059791896693 Q96BY7 ATG2B Q96BY7.S240.p_ATG2B Q96BY7_S240s _1_1_240_240 Q96BY7 Q96BY7 Autophagy-related protein 2 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12545.12545.2 15.43 15.43 1.138 5 1 1 0 1064.0244 2047.0782 S240s TMT10 239 (K) SsPVCSTAPVETEPK (L) S(0.0)S(0.99)PVCS(0.0)T(0.0)APVET(0.0)EPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATG2B 234641.2 2 1 1188.1 168.47 HUMAN 1 -3.0462 47.7052 FSATVRASQGPVYKG-p Q9Y2V2;S58-p FSATVRASQGPVYKG 0.0395731079578075 0.0912008281894987 0.771666666666667 0.385666666666667 31.414446339715 13.7560960869802 0.771666666666667 0.385666666666667 0.000722030205084864 0.0421104993450617 6.87428519771097 2.64669126283088 Q9Y2V2 CARHSP1 Q9Y2V2.S58.p_CARHSP1 Q9Y2V2_S58s _1_1_58_58 Q9Y2V2 Q9Y2V2|I3L3X8 Calcium-regulated heat-stable protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9917.9917.2 11.08 5.08 8.417 2 1 1 0 694.3729 1307.7724 S58s TMT10 57 (R) AsQGPVYK (G) AS(0.99)QGPVY(0.0)K K:TMT10,s:Phosphorylated S CARHSP1 16120 1 7 1307.1 155.77 HUMAN 1 31.4144 13.7561 FSAYIKNSNPALNDN-p O00299;S121-p FSAYIKNSNPALNDN 0.762870324683751 0.159702006388825 0.0653333333333333 0.23 2.25268440339804 10.4770321636266 0.0653333333333334 0.23 0.595294074517077 0.0895976839705253 0.564061123448772 2.06384314794023 O00299 CLIC1 O00299.S121.p_CLIC1 O00299_S121s _1_1_121_121 O00299 O00299 Chloride intracellular channel protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21659.21659.4 17.35 13.16 4.583 3 1 1 0 702.124 2725.5128 S121s TMT10 114 (K) FSAYIKNsNPALNDNLEK (G) FS(0.0)AY(0.0)IKNS(0.99)NPALNDNLEK K:TMT10,s:Phosphorylated S CLIC1 27264.5 2 2 3259.1 55.68 HUMAN 1 2.2527 10.477 FSDEEELSD______-p Q8TBF4;S216-p FSDEEELSD______ 0.769192567611738 0.0161377331038498 0.0416666666666667 0.449666666666667 2.18439069738738 24.7486079871088 0.0416666666666667 0.449666666666667 0.604729187151584 0.00335072820430881 0.549260244086551 4.97426011029338 Q8TBF4 ZCRB1 Q8TBF4.S216.p_ZCRB1 Q8TBF4_S216s _1_1_216_216 Q8TBF4 Q8TBF4|G3V1V1 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16047.16047.2 19.54 16.33 17.961 5 1 1 0 1044.4702 2007.9799 S216s TMT10 205 (K) KSTYFSDEEELsD (-) KS(0.0)T(0.0)Y(0.0)FS(0.0)DEEELS(0.99)D K:TMT10,s:Phosphorylated S ZCRB1 24819.5 3 5 1826.1 112.48 HUMAN 1 2.1844 24.7486 FSDKRARSMDIDDFI-p Q9UNQ2;S292-p FSDKRARSMDIDDFI 0.170394380090679 0.36785291790829 -0.229666666666667 -0.11 15.3370017958321 5.75942869429581 -0.229666666666667 -0.11 0.0292617179857786 0.26549547929973 -2.9418983660937 -1.24130245959338 Q9UNQ2 DIMT1 Q9UNQ2.S292.p_DIMT1 Q9UNQ2_S292s _1_1_292_292 Q9UNQ2 Q9UNQ2 Probable dimethyladenosine transferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26427.26427.2 11.51 11.51 99 1 1 1 0 710.822 1340.6718 S292s TMT10 292 (R) sMDIDDFIR (L) S(1.0)MDIDDFIR s:Phosphorylated S DIMT1 35521 1 1 6469.1 11.51 HUMAN 1 -15.337 -5.7594 FSDLDQRSIGSDSQG-p E7ETA6;S116-p FSDLDQRSIGSDSQG 0.475365464901714 0.300711469330676 0.117 -0.120333333333333 5.94622644190745 6.88908602843477 0.117 -0.120333333333333 0.254318150059976 0.204687535576701 1.27497833743848 -1.44119213822162 E7ETA6 PCM1 E7ETA6.S116.p_PCM1 E7ETA6_S116s _1_1_116_116 E7ETA6 E7ETA6|Q15154-2|A6NNN6|Q15154-3|E9PGW9 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5180.5180.2 11.07 11.07 2.193 3 1 1 0 608.2825 1135.5905 S116s TMT10 116 (R) sIGSDSQGR (A) S(0.99)IGS(0.0)DS(0.0)QGR s:Phosphorylated S PCM1 229381.8 2 6 13.1 1159.95 HUMAN 1 5.9462 -6.8891 FSDSPPQSPTFPEAG-p Q13085;S1263-p FSDSPPQSPTFPEAG 0.255903152682223 0.106275942801302 -0.303666666666667 -0.28 11.2464838356764 12.8626337140728 -0.303666666666667 -0.28 0.0750501589590673 0.0517293032171137 -2.19934877605978 -2.48499724147847 Q13085 ACACA Q13085.S1263.p_ACACA Q13085_S1259sS1263s_2_2_1259_1263 Q13085 Q13085-4|Q13085-2|Q13085-3 Acetyl-CoA carboxylase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33579.33579.4 25.03 25.03 1.215 7 2 2 0 1056.2105 4061.8825 S1259s S1263s TMT10 1248 (R) IFDEVMGCFSDsPPQsPTFPEAGHTSLYDEDK (V) IFDEVMGCFS(0.0)DS(0.99)PPQS(0.99)PT(0.0)FPEAGHT(0.0)S(0.0)LY(0.0)DEDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ACACA 267260.7 6 14 860.1 210.55 HUMAN 1 -11.2465 -12.8626 FSDSTSKTPPQEELP-p I6L8A6;T315-p FSDSTSKTPPQEELP 0.159445665312404 0.0949706068397533 0.355 0.378666666666667 15.9645503835914 13.5222564742838 0.355 0.378666666666667 0.0253247380366781 0.0444400309337128 3.06138654235384 2.60411643349646 I6L8A6 NotFound I6L8A6.T315.p_NotFound I6L8A6_T315t _1_1_315_315 I6L8A6 Q99708-2|I6L8A6|Q99708-3 DNA endonuclease RBBP8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14184.14184.4 10.72 10.72 1.123 6 1 1 0 615.3128 2378.2604 T315t TMT10 308 (R) FSDSTSKtPPQEELPTR (V) FS(0.0)DS(0.0)T(0.0)S(0.0)KT(0.99)PPQEELPT(0.0)R K:TMT10,t:Phosphorylated T RBBP8 103921.2 2 5 258.1 398.22 HUMAN 1 15.9646 13.5223 FSDVLPESPKSARKK-p Q5VVW2;S432-p FSDVLPESPKSARKK 0.182575950664411 0.551278592772213 -0.264666666666667 0.0746666666666667 14.5282836409882 3.4826223875843 -0.264666666666667 0.0746666666666667 0.0352510157740874 0.448474507116868 -2.79043963810769 0.816717979884035 Q5VVW2 GARNL3 Q5VVW2.S432.p_GARNL3 Q5VVW2_S432s _1_1_432_432 Q5VVW2 Q5VVW2|Q5VVW2-5|Q5VVW2-2|A0A0C4DFW0|Q5VVW2-3 GTPase-activating Rap/Ran-GAP domain-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20964.20964.3 12.86 9.25 12.86 3 1 1 0 581.9714 1663.9307 S432s TMT10 424 (R) SFSDVLPEsPK (S) S(0.0)FS(0.0)DVLPES(0.99)PK K:TMT10,s:Phosphorylated S GARNL3 113877.2 1 1 5087.1 23.14 HUMAN 1 -14.5283 3.4826 FSEDTLSSYTEAVSS-p Q12767-2;S368-p FSEDTLSSYTEAVSS 0.244064503559459 0.175781172144224 0.2 0.167333333333333 11.718372755507 9.92842283791236 0.2 0.167333333333333 0.0673228859061109 0.101661781567617 2.28247910031391 1.96848806707183 Q12767 KIAA0195 Q12767.2.S368.p_KIAA0195 Q12767-2_S368s _1_1_368_368 Q12767-2 Q12767-2|C9JL75 Isoform 2 of Transmembrane protein 94 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27045.27045.3 17.31 17.31 1.171 8 1 1 0 863.7264 2509.1966 S368s TMT10 361 (K) FSEDTLSsYTEAVSSQEMLR (C) FS(0.0)EDT(0.0)LS(0.0)S(0.99)Y(0.0)T(0.0)EAVS(0.0)S(0.0)QEMLR s:Phosphorylated S TMEM94 156822 1 3 1431.1 142.91 HUMAN 1 11.7184 9.9284 FSEGRLLSPVVAAAA-p Q9Y4D2;S743-p FSEGRLLSPVVAAAA 0.823134573522057 0.664359075351183 0.0343333333333333 -0.0766666666666666 1.62810111281916 2.43118432272044 0.0343333333333333 -0.0766666666666666 0.687368916021113 0.571322815475336 0.424771033620793 -0.602230881234831 Q9Y4D2 DAGLA Q9Y4D2.S743.p_DAGLA Q9Y4D2_S743s _1_1_743_743 Q9Y4D2 Q9Y4D2 Sn1-specific diacylglycerol lipase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25048.25048.2 9.09 9.09 99 1 1 1 0 688.8981 1296.8201 S743s TMT10 741 (R) LLsPVVAAAAR (Q) LLS(1.0)PVVAAAAR s:Phosphorylated S DAGLA 116490.4 1 4 1490.1 137.27 HUMAN 1 1.6281 -2.4312 FSEGVLQSPSQDQEK-p Q9C0C2;S435-p FSEGVLQSPSQDQEK 0.237133599542224 0.00354462581316227 -0.239333333333333 -1.02433333333333 11.9764533982782 36.5507404252387 -0.239333333333333 -1.02433333333333 0.0634387563010751 0.000221271743299488 -2.32815877073134 -8.68300915849243 Q9C0C2 TNKS1BP1 Q9C0C2.S435.p_TNKS1BP1 Q9C0C2_S435s _1_1_435_435 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17553.17553.3 15.42 13.47 1.876 3 1 1 0 739.7009 2137.1177 S435s TMT10 428 (R) FSEGVLQsPSQDQEK (L) FS(0.0)EGVLQS(0.99)PS(0.0)QDQEK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 5 15 4.1 2105.7 HUMAN 1 -11.9765 -36.5507 FSEKAKPSPHPIKDK-p Q9ULU4-19;S709-p FSEKAKPSPHPIKDK 0.94894200602254 0.0106648649786627 -0.0133333333333333 -0.635 0.450960679093932 27.651816062112 -0.0133333333333334 -0.635 0.90137172803668 0.00171719017031278 -0.129855042044368 -5.74012608363774 Q9ULU4 ZMYND8 Q9ULU4.19.S709.p_ZMYND8 Q9ULU4-19_S709s _1_1_709_709 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-10|Q9ULU4-13|Q9ULU4-20|Q9ULU4-5|Q9ULU4-9|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-18|Q9ULU4-21|Q9ULU4-8|Q9ULU4-23|Q9ULU4-15|A0A087WYS3|Q9ULU4-17|Q9ULU4-6|Q9ULU4-3|A0A087WV57|Q9ULU4-4 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7478.7478.5 9.28 9.28 99 1 1 1 0 443.6692 2134.3518 S709s TMT10 706 (K) AKPsPHPIKDK (L) AKPS(1.0)PHPIKDK K:TMT10,s:Phosphorylated S ZMYND8 139738.7 4 14 57.1 712.18 HUMAN 1 -0.451 -27.6518 FSEKTPPTPPSSIVA-p Q96QT6;T880-p FSEKTPPTPPSSIVA 0.218903866337636 0.0814257174742308 -0.488333333333333 -0.219666666666667 12.7108530366305 14.4434059236062 -0.488333333333333 -0.219666666666667 0.0535691427235202 0.0359467314897266 -2.45909239050004 -2.77297091866831 Q96QT6 PHF12 Q96QT6.T880.p_PHF12 Q96QT6_T880t _1_1_880_880 Q96QT6 Q96QT6|Q96QT6-4 PHD finger protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17069.17276.2 15.81 15.81 1.648 4 1 1 0 866.9876 1652.9987 T880t TMT10 877 (K) TPPtPPSSIVAK (V) T(0.0)PPT(0.99)PPS(0.0)S(0.0)IVAK K:TMT10,t:Phosphorylated T PHF12 111750.5 2 13 626.1 258.17 HUMAN 1 -12.7109 -14.4434 FSELNHLSPVQGTEA-p Q8WYP5-2;S1437-p FSELNHLSPVQGTEA 0.264815877038443 0.0132337093750666 -0.178 -0.418666666666667 10.9434459500455 26.139267052678 -0.178 -0.418666666666667 0.0804739659625394 0.00243261452035744 -2.1462044526833 -5.33117393764756 Q8WYP5 AHCTF1 Q8WYP5.2.S1437.p_AHCTF1 Q8WYP5-2_S1437s _1_1_1437_1437 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36859.36859.5 29.54 29.54 2.256 6 1 1 0 829.0194 4061.0942 S1437s TMT10 1422 (K) DLLVAAEAFSELNHLsPVQGTEASLCAPSVYEGK (I) DLLVAAEAFS(0.0)ELNHLS(0.99)PVQGT(0.0)EAS(0.0)LCAPS(0.0)VY(0.0)EGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AHCTF1 258049.6 5 22 40.1 829.79 HUMAN 1 -10.9434 -26.1393 FSESESRSPLEDETD-p Q9BY89;S1675-p FSESESRSPLEDETD 0.100287824494648 0.0135875567806516 -0.380666666666667 -0.451 21.1260479373429 25.9438181168144 -0.380666666666667 -0.451 0.00771605307467558 0.00254459218082036 -4.12488869720047 -5.27994095331828 Q9BY89 KIAA1671 Q9BY89.S1675.p_KIAA1671 Q9BY89_S1675s _1_1_1675_1675 Q9BY89 Q9BY89|A0A1B0GVJ7|Q9BY89-2 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24556.24556.3 13.02 13.02 1.266 6 1 1 0 1025.1387 2993.4239 S1675s TMT10 1668 (R) FSESESRsPLEDETDNTWMFK (D) FS(0.0)ES(0.0)ES(0.0)RS(0.99)PLEDET(0.0)DNT(0.0)WMFK K:TMT10,s:Phosphorylated S KIAA1671 197734.4 3 24 105.1 590.35 HUMAN 1 -21.126 -25.9438 FSFKSALSPSKSPAK-p P49792;S2276-p FSFKSALSPSKSPAK 0.164891315062604 0.00113009102809225 1.04033333333333 -1.875 15.6777046678069 48.962585062282 1.04033333333333 -1.875 0.0270538783727833 1.269818043135e-05 3.00654795517024 -15.0027362879414 P49792 RANBP2 P49792.S2276.p_RANBP2 P49792_S2276s _1_1_2276_2276 P49792 P49792|Q7Z3J3 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10082.10082.3 14.11 14.11 2.95 4 1 1 0 614.0233 1760.0885 S2276s TMT10 2273 (K) SALsPSKSPAK (L) S(0.0)ALS(0.99)PS(0.0)KS(0.0)PAK K:TMT10,s:Phosphorylated S RANBP2 362585.9 3 45 9.1 1298.62 HUMAN 1 15.6777 -48.9626 FSFLASDTEEEEENS-p O15047;T510-p FSFLASDTEEEEENS 0.203454009826202 0.421455663948807 0.305333333333333 -0.097 13.4089793020842 4.99410364590114 0.305333333333333 -0.097 0.0456144108340891 0.316657395519238 2.58503060569448 -1.10275479425197 O15047 SETD1A O15047.T510.p_SETD1A O15047_T510t_1_1_510_510 O15047 O15047 Histone-lysine N-methyltransferase SETD1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23656.23656.3 12 12 1.15 6 1 1 0 1073.1709 3121.54 T510t M519m TMT10 501 (R) SKFSFLASDtEEEEENSSmVLGAR (D) S(0.0)KFS(0.0)FLAS(0.0)DT(0.99)EEEEENS(0.0)S(0.0)M(1.0)VLGAR K:TMT10,t:Phosphorylated T,m:Oxidized methionine SETD1A 186829.5 3 6 570.2 269.37 HUMAN 1 13.409 -4.9941 FSFYGNLSPRRSLYR-p Q9P2F8;S1478-p FSFYGNLSPRRSLYR 0.156870667579318 0.00506471865308238 -0.249333333333333 -0.607333333333333 16.1421998545036 33.4474467790221 -0.249333333333333 -0.607333333333333 0.024309723240565 0.000452121668973739 -3.09554196016178 -7.53977399501116 Q9P2F8 SIPA1L2 Q9P2F8.S1478.p_SIPA1L2 Q9P2F8_S1478s _1_1_1478_1478 Q9P2F8 Q9P2F8|Q9P2F8-2 Signal-induced proliferation-associated 1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23431.23431.3 14.12 14.12 4.214 3 1 1 0 499.5764 1416.7473 S1478s TMT10 1471 (K) FSFYGNLsPR (R) FS(0.0)FY(0.0)GNLS(0.99)PR s:Phosphorylated S SIPA1L2 192488.1 3 11 322.1 363.46 HUMAN 1 -16.1422 -33.4474 FSGFPLDSPKTLVLD-p Q5VUA4;S2075-p FSGFPLDSPKTLVLD 0.476784104106263 0.00652870970598478 -0.116333333333333 0.659333333333333 5.92150503477054 31.4249861121625 -0.116333333333333 0.659333333333333 0.255769937010062 0.000720280054540998 -1.27056772238979 6.86610135499693 Q5VUA4 ZNF318 Q5VUA4.S2075.p_ZNF318 Q5VUA4_S2075s _1_1_2075_2075 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.34088.34088.5 23.81 23.81 4.857 7 1 1 0 865.002 4241.0095 S2075s TMT10 2043 (K) VCEENSVSPIGCNSSDPADFEPIPSFSGFPLDsPK (T) VCEENS(0.0)VS(0.0)PIGCNS(0.0)S(0.0)DPADFEPIPS(0.0)FS(0.0)GFPLDS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF318 252762.4 3 33 37.1 870.88 HUMAN 1 -5.9215 31.425 FSGISGCSDGVSQEG-p Q6R327-3;S1601-p FSGISGCSDGVSQEG 0.387197491638052 0.0133246053489252 0.161333333333333 0.440333333333333 7.62136250786144 26.086983724409 0.161333333333333 0.440333333333333 0.17292737507287 0.00246207697986716 1.56939950561834 5.31743378155079 Q6R327 RICTOR Q6R327.3.S1601.p_RICTOR Q6R327-3_S1601s _1_1_1601_1601 Q6R327-3 Q6R327-3 Isoform 3 of Rapamycin-insensitive companion of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15578.15578.3 8.08 8.08 2.429 8 1 1 0 862.7297 2506.2132 S1601s TMT10 1594 (K) FSGISGCsDGVSQEGSASSTK (S) FS(0.0)GIS(0.0)GCS(0.99)DGVS(0.0)QEGS(0.0)AS(0.0)S(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RICTOR 197118.3 1 22 452.1 308.36 HUMAN 1 7.6214 26.087 FSGSSTFSPTILSSD-p Q7Z4S6-5;S524-p FSGSSTFSPTILSSD 0.478558986029447 0.266488361814102 0.140333333333333 0.114666666666667 5.88926830999092 7.56180523077024 0.140333333333333 0.114666666666667 0.257675524662019 0.17531516182768 1.26481245046933 1.55857343996998 Q7Z4S6 KIF21A Q7Z4S6.5.S524.p_KIF21A Q7Z4S6-5_S524s _1_1_524_524 Q7Z4S6-5 Q7Z4S6-4|Q7Z4S6-2|Q7Z4S6-5|Q7Z4S6-3|Q7Z4S6-6 Isoform 5 of Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.34209.34209.5 29.25 29.25 1.11 10 1 1 0 849.2673 4162.3345 S524s TMT10 514 (R) APYFSGSSTFsPTILSSDKETIEIIDLAKK (D) APY(0.0)FS(0.0)GS(0.0)S(0.0)T(0.0)FS(0.99)PT(0.0)ILS(0.0)S(0.0)DKET(0.0)IEIIDLAKK K:TMT10,s:Phosphorylated S KIF21A 184163.5 6 7 390.1 332.37 HUMAN 1 5.8893 7.5618 FSHPRDFTPVCTTEL-p P30041;T44-p FSHPRDFTPVCTTEL 0.129739749890184 0.570164528929828 0.267666666666667 0.112333333333333 18.3710663139639 3.28816710897079 0.267666666666667 0.112333333333333 0.0145510176868989 0.46901128131953 3.53775507413375 0.778243070594813 P30041 PRDX6 P30041.T44.p_PRDX6 P30041_T44t _1_1_44_44 P30041 P30041 Peroxiredoxin-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18118.18118.3 14.53 14.53 3.828 3 1 1 0 568.9353 1624.8202 T44t TMT10 42 (R) DFtPVCTTELGR (A) DFT(0.99)PVCT(0.0)T(0.0)ELGR C:Carbamidomethylation,t:Phosphorylated T PRDX6 25148.6 3 1 3594.1 47.5 HUMAN 1 18.3711 3.2882 FSHQLLDSLQKATRL-p A0A075B6F3;S1066-p FSHQLLDSLQKATRL 0.584410741735604 0.415833288591712 0.08 -0.094 4.29351910307804 5.06906002413349 0.08 -0.094 0.372090078199754 0.311238990191932 0.972836482996791 -1.11647048752314 A0A075B6F3 DNAH8 A0A075B6F3.S1066.p_DNAH8 A0A075B6F3_S1066s _1_1_1066_1066 A0A075B6F3 A0A075B6F3|Q96JB1|Q96JB1-2|H0Y7V4 Dynein heavy chain 8, axonemal HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.35428.35634.5 7.27 0.13 7.273 2 1 1 0 645.1392 3141.7374 S1066s Hydrogen 1050 (K) KECKEVFAFFSHQLLDsLQK (A) KECKEVFAFFS(0.0)HQLLDS(0.99)LQK K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S DNAH8 542407.3 1 2 5474.1 18.99 HUMAN 1 4.2935 -5.0691 FSINSVASTYSEFAR-p O43663-4;S577-p FSINSVASTYSEFAR 0.943864818517262 0.622228177881123 0.0123333333333333 0.114666666666667 0.49457959421044 2.79996555482286 0.0123333333333333 0.114666666666667 0.892363998035979 0.524811622669138 0.141805141540468 0.67938994187963 O43663 PRC1 O43663.4.S577.p_PRC1 O43663-4_S574sS577s_2_2_574_577 O43663-4 O43663-4|O43663-2 Isoform 4 of Protein regulator of cytokinesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30198.30198.3 15.4 15.4 1.109 6 2 2 0 727.9868 2022.013 S574s S577s TMT10 569 (R) NFSINsVAsTYSEFAR (E) NFS(0.0)INS(0.99)VAS(0.99)T(0.0)Y(0.0)S(0.0)EFAR s:Phosphorylated S PRC1 70874.5 1 16 715.2 238.03 HUMAN 1 0.4946 2.8 FSKEELMSSDLEETA-p O00567;S519-p FSKEELMSSDLEETA 0.450933814644621 0.792556798018704 0.101333333333333 0.03 6.3857647726011 1.40627064794319 0.101333333333333 0.03 0.229838893790861 0.723390723465238 1.35300545134713 0.37285711682541 O00567 NOP56 O00567.S519.p_NOP56 O00567_S519s _1_1_519_519 O00567 O00567 Nucleolar protein 56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23752.23752.2 21.38 15 2.035 8 1 1 0 1620.8143 3160.6538 S519s TMT10 511 (K) SFSKEELMsSDLEETAGSTSIPK (R) S(0.0)FS(0.0)KEELMS(0.99)S(0.0)DLEET(0.0)AGS(0.0)T(0.0)S(0.0)IPK K:TMT10,s:Phosphorylated S NOP56 66448.1 67 7 262.1 396.77 HUMAN 1 6.3858 1.4063 FSKEEPVSSGPEEAV-p O00567;S569-p FSKEEPVSSGPEEAV 0.566681058099023 0.0629095680996146 -0.0833333333333333 -0.221 4.54487891835306 15.9926980253184 -0.0833333333333334 -0.221 0.35116571490787 0.0251611332360604 -1.01995259650927 -3.06462412772455 O00567 NOP56 O00567.S569.p_NOP56 O00567_S569sS570s_2_2_569_570 O00567 O00567 Nucleolar protein 56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13767.13975.3 13.53 13.53 13.53 3 2 2 0 918.1333 2592.4488 S569s S570s Hydrogen 561 (R) KFSKEEPVssGPEEAVGK (S) KFS(0.0)KEEPVS(0.99)S(0.99)GPEEAVGK K:TMT10-Lys-Only,s:Phosphorylated S NOP56 66448.1 17 15 262.1 396.77 HUMAN 1 -4.5449 -15.9927 FSKELKKTENISYEM-p Q9HAU0-6;T1165-p FSKELKKTENISYEM 0.45608190047632 0.0563256695497726 0.101333333333333 0.223 6.28851066713416 16.6474867767351 0.101333333333333 0.223 0.235043872228663 0.021639704317632 1.33580091361849 3.19115427308091 Q9HAU0 PLEKHA5 Q9HAU0.6.T1165.p_PLEKHA5 Q9HAU0-6_T1165t_1_1_1165_1165 Q9HAU0-6 Q9HAU0-6|Q9HAU0-4|Q9HAU0-2|Q9HAU0-8|Q9HAU0-5|A0JP02 Isoform 6 of Pleckstrin homology domain-containing family A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26291.26291.4 7.28 7.28 1.177 4 1 1 0 958.7147 3718.8621 T1165t M1172m N1182n M1186m TMT10 1164 (K) KtENISYEmLFEPEPNGVnSVEmMDK (E) KT(0.99)EN(0.0)IS(0.0)Y(0.0)EM(0.99)LFEPEPN(0.0)GVN(0.99)S(0.0)VEM(0.99)M(0.0)DK K:TMT10,t:Phosphorylated T,m:Oxidized methionine,n:Deamidated PLEKHA5 147692.6 7 16 374.1 338.83 HUMAN 1 6.2885 16.6475 FSKIKQSSQDNELKS-p Q13427;S696-p FSKIKQSSQDNELKS 0.434135403741661 0.0924402057109601 -0.108333333333333 0.193333333333333 6.67631536324754 13.6771679302601 -0.108333333333333 0.193333333333333 0.214965350747907 0.0428828071521941 -1.40422626986053 2.63229972385413 Q13427 PPIG Q13427.S696.p_PPIG Q13427_S696s_1_1_696_696 Q13427 Q13427|E9PG73 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11709.11969.3 13.32 13.32 1.442 2 1 1 0 686.7073 1977.1584 S696s N699n TMT10 692 (K) IKQSsQDnELK (S) IKQS(0.0)S(0.99)QDN(1.0)ELK K:TMT10,s:Phosphorylated S,n:Deamidated PPIG 89129.1 6 16 112.1 571.91 HUMAN 1 -6.6763 13.6772 FSKQNRLTMTRNAVW-p P52294;T227-p FSKQNRLTMTRNAVW 0.346276230374682 0.500762320218818 0.171666666666667 -0.103 8.55762436015536 4.02030564829248 0.171666666666667 -0.103 0.139391908391336 0.396250145933689 1.73178411726919 -0.92085250940877 P52294 KPNA1 P52294.T227.p_KPNA1 P52294_T227t _1_1_227_227 P52294 P52294 Importin subunit alpha-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5282.5282.3 8.03 8.03 2.562 2 1 1 0 443.5616 1248.7044 T227t TMT10 223 (K) QNRLtMTR (N) QNRLT(0.99)MT(0.0)R t:Phosphorylated T KPNA1 60962.4 1 2 4687.1 27.93 HUMAN 1 8.5576 -4.0203 FSKVRSLTLDTWEPE-p Q15057;T455-p FSKVRSLTLDTWEPE 0.46984610250087 0.268073824272307 -0.0993333333333333 0.112333333333333 6.05886318701316 7.53000372632687 -0.0993333333333334 0.112333333333333 0.247807063465318 0.176603630539374 -1.29504279925987 1.5530429648932 Q15057 ACAP2 Q15057.T455.p_ACAP2 Q15057_T455t _1_1_455_455 Q15057 Q15057|A0A087X1H5 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32631.32631.3 15.46 14.63 1.105 3 1 1 0 695.0432 2003.1465 T455t TMT10 453 (R) SLtLDTWEPELLK (L) S(0.0)LT(0.99)LDT(0.0)WEPELLK K:TMT10,t:Phosphorylated T ACAP2 88997 2 7 629.1 257.13 HUMAN 1 -6.0589 7.53 FSLKTPDSPPTPAPL-p Q16584;S705-p FSLKTPDSPPTPAPL 0.557193531914855 0.621867543902399 -0.129666666666667 0.065 4.68830545892058 2.80447830128257 -0.129666666666667 0.065 0.339757814285357 0.524266575046615 -1.04661583030362 0.680319956952533 Q16584 MAP3K11 Q16584.S705.p_MAP3K11 Q16584_S705s _1_1_705_705 Q16584 Q16584|Q16584-2|E9PID4 Mitogen-activated protein kinase kinase kinase 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37334.37334.2 15.45 12.41 3.367 3 1 1 0 1282.1923 2483.4071 S705s TMT10 702 (K) TPDsPPTPAPLLLDLGIPVGQR (S) T(0.0)PDS(0.99)PPT(0.0)PAPLLLDLGIPVGQR s:Phosphorylated S MAP3K11 93313.9 3 11 536.1 278.53 HUMAN 1 -4.6883 2.8045 FSLLRGPSWDPFRDW-p P04792;S15-p FSLLRGPSWDPFRDW 0.194822091031277 0.0210220565593356 0.225333333333333 0.365333333333333 13.8572444635262 22.9410867117055 0.225333333333333 0.365333333333333 0.0411410672507881 0.00508032304465695 2.66674557434331 4.53545131642823 P04792 HSPB1 P04792.S15.p_HSPB1 P04792_S15s _1_1_15_15 P04792 P04792|F8WE04 Heat shock protein beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22803.23009.3 21.38 21.38 19.529 3 1 1 0 661.6164 1902.867 S15s Hydrogen 13 (R) GPsWDPFRDWYPHSR (L) GPS(0.99)WDPFRDWY(0.0)PHS(0.0)R s:Phosphorylated S HSPB1 22839.1 18 2 357.1 346.69 HUMAN 1 13.8572 22.9411 FSLQKTLSMPSGPSG-p Q4ADV7;S1037-p FSLQKTLSMPSGPSG 0.260789944862731 0.0802529084845163 -0.173 -0.231333333333333 11.057610539446 14.5368946910561 -0.173 -0.231333333333333 0.0783860799360369 0.0351811904503998 -2.1662053017768 -2.79028595850139 Q4ADV7 RIC1 Q4ADV7.S1037.p_RIC1 Q4ADV7_S1037s _1_1_1037_1037 Q4ADV7 Q4ADV7|Q4ADV7-3|Q4ADV7-2 RAB6A-GEF complex partner protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15523.15523.3 7.73 7.57 1.195 4 1 1 0 533.9457 1519.8554 S1037s TMT10 1035 (K) TLsMPSGPSGK (R) T(0.0)LS(0.99)MPS(0.0)GPS(0.0)GK K:TMT10,s:Phosphorylated S RIC1 160895.7 2 6 1588.1 129.39 HUMAN 1 -11.0576 -14.5369 FSLVRENSKETFSGK-p Q5VZL5;S162-p FSLVRENSKETFSGK 0.860894111325596 0.1089450205284 -0.0396666666666667 0.188 1.27081756560386 12.7208818518705 -0.0396666666666667 0.188 0.746308251584221 0.0534455825040069 -0.34049540440229 2.45957589802445 Q5VZL5 ZMYM4 Q5VZL5.S162.p_ZMYM4 Q5VZL5_S162s _1_1_162_162 Q5VZL5 Q5VZL5|Q5VZL5-4|Q5VZL5-2 Zinc finger MYM-type protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9313.9313.3 11.81 11.81 2.104 3 1 1 0 632.0022 1814.0263 S162s TMT10 160 (R) ENsKETFSGK (E) ENS(0.99)KET(0.0)FS(0.0)GK K:TMT10,s:Phosphorylated S ZMYM4 176265.3 4 2 535.1 278.69 HUMAN 1 -1.2708 12.7209 FSLYACASPKTPIQA-p P15056;S750-p FSLYACASPKTPIQA 0.19237780315817 0.0330281131892331 -0.204333333333333 -0.290333333333333 13.9714410901347 19.9710359750758 -0.204333333333333 -0.290333333333333 0.0400733722790363 0.010066915019266 -2.68767651687667 -3.8691233265543 P15056 BRAF P15056.S750.p_BRAF P15056_S750s _1_1_750_750 P15056 P15056 Serine/threonine-protein kinase B-raf HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25125.25125.3 15.8 15.8 2.323 4 1 1 0 810.7195 2350.179 S750s TMT10 736 (R) AGFQTEDFSLYACAsPK (T) AGFQT(0.0)EDFS(0.0)LY(0.0)ACAS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRAF 85177.1 3 27 441.1 311.96 HUMAN 1 -13.9714 -19.971 FSNAKAYTPNKRSKI-p Q9NSI6-2;T1393-p FSNAKAYTPNKRSKI 0.718243489759715 0.00383473386221413 -0.0573333333333333 -0.863333333333333 2.71204447669854 35.785495484422 -0.0573333333333334 -0.863333333333333 0.535544486226878 0.000263906721531884 -0.661292820151002 -8.38792516534455 Q9NSI6 BRWD1 Q9NSI6.2.T1393.p_BRWD1 Q9NSI6-2_T1393t _1_1_1393_1393 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5597.5597.2 9.22 5.66 5.938 2 1 1 0 694.3789 1307.7836 T1393t TMT10 1391 (K) AYtPNKR (S) AY(0.0)T(0.99)PNKR K:TMT10,t:Phosphorylated T BRWD1 259915.1 1 9 208.1 444.81 HUMAN 1 -2.712 -35.7855 FSNHRTRSWDYIEGQ-p Q5T5U3;S494-p FSNHRTRSWDYIEGQ 0.35587913763094 0.0285647063308557 0.132666666666667 0.289 8.34159376734887 20.9154460288716 0.132666666666667 0.289 0.146501011508942 0.00809944754508605 1.69437225688057 4.07419067989556 Q5T5U3 ARHGAP21 Q5T5U3.S494.p_ARHGAP21 Q5T5U3_S494s _1_1_494_494 Q5T5U3 Q5T5U3|A0A087WW76|A0A1B0GV73|F8W9U9|Q5T5U3-3 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19859.19859.4 9.36 9.36 1.145 7 1 1 0 1062.5223 4167.1085 S494s TMT10 492 (R) TRsWDYIEGQDETLENVNSGTPIPDSNGEKK (Q) T(0.0)RS(0.99)WDY(0.0)IEGQDET(0.0)LENVNS(0.0)GT(0.0)PIPDS(0.0)NGEKK K:TMT10,s:Phosphorylated S ARHGAP21 218696.3 4 9 148.1 512.52 HUMAN 1 8.3416 20.9154 FSNSKAYTPSKRSRI-p Q8WWQ0;T1396-p FSNSKAYTPSKRSRI 0.950466896477293 0.00278908336687029 0.011 -0.906333333333333 0.435284339479949 38.6352587774048 0.011 -0.906333333333333 0.904631208160366 0.000136922279986223 0.125536350517265 -9.53414605501063 Q8WWQ0 PHIP Q8WWQ0.T1396.p_PHIP Q8WWQ0_T1396t _1_1_1396_1396 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5708.5708.2 8.5 5.81 2.53 3 1 1 0 680.8731 1280.7727 T1396t TMT10 1394 (K) AYtPSKR (S) AY(0.0)T(0.99)PS(0.0)KR K:TMT10,t:Phosphorylated T PHIP 208454.1 2 14 108.1 577.05 HUMAN 1 0.4353 -38.6353 FSPASPATPNGTKGK-p Q53GS7;T102-p FSPASPATPNGTKGK 0.731724827574726 0.683565292617347 0.078 -0.041 2.57377353797151 2.26183358275733 0.078 -0.041 0.552869518086932 0.594041302594732 0.632426765790259 -0.56596772210335 Q53GS7 GLE1 Q53GS7.T102.p_GLE1 Q53GS7_T102t_1_1_102_102 Q53GS7 Q53GS7|Q53GS7-2 Nucleoporin GLE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14739.14739.3 20.25 20.25 3.133 7 1 1 0 810.3959 2348.2134 T102t N104n TMT10 88 (K) SPDASSAFSPASPAtPnGTK (G) S(0.0)PDAS(0.0)S(0.0)AFS(0.0)PAS(0.0)PAT(0.99)PN(1.0)GT(0.0)K K:TMT10,t:Phosphorylated T,n:Deamidated GLE1 80405.3 2 4 3903.1 41.03 HUMAN 1 2.5738 -2.2618 FSPCAEKSPEQRGRF-p P35916;S953-p FSPCAEKSPEQRGRF 0.283541122705939 0.0161555116662914 0.183333333333333 -0.368666666666667 10.3385779798527 24.7387948760507 0.183333333333333 -0.368666666666667 0.0925000999506724 0.00335830791015545 2.04059933833677 -4.97180321025434 P35916 FLT4 P35916.S953.p_FLT4 P35916_S953s _1_1_953_953 P35916 P35916|E9PD35|P35916-1 Vascular endothelial growth factor receptor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10325.10325.3 10.96 10.96 2.338 2 1 1 0 720.6783 2080.0534 S953s TMT10 944 (R) DAFSPCAEKsPEQR (G) DAFS(0.0)PCAEKS(0.99)PEQR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FLT4 154865.6 1 1 5189.1 22.01 HUMAN 1 10.3386 -24.7388 FSPIQEKSPKQALSS-p O43683;S661-p FSPIQEKSPKQALSS 0.273390180795584 0.00175772205385967 -0.250333333333333 -1.23566666666667 10.6657806233944 43.5908431164197 -0.250333333333333 -1.23566666666667 0.0857870902704518 4.37437175166709e-05 -2.09765477204432 -11.8706666698736 O43683 BUB1 O43683.S661.p_BUB1 O43683_S661s _1_1_661_661 O43683 O43683|O43683-3|O43683-2 Mitotic checkpoint serine/threonine-protein kinase BUB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14952.14952.3 9.61 9.61 2.148 2 1 1 0 643.3671 1848.1198 S661s TMT10 654 (K) FSPIQEKsPK (Q) FS(0.0)PIQEKS(0.99)PK K:TMT10,s:Phosphorylated S BUB1 123514.1 5 7 1341.1 151.76 HUMAN 1 -10.6658 -43.5908 FSPKEKDSPHMQDPN-p P23511;S326-p FSPKEKDSPHMQDPN 0.0745793811074775 0.00830425332591142 0.373666666666667 0.455 24.1586502532624 29.5791679558808 0.373666666666667 0.455 0.00383826516658081 0.00110175036843005 4.83379652824731 6.29530469756912 P23511 NFYA P23511.S326.p_NFYA P23511_S326s _1_1_326_326 P23511 P23511|P23511-2 Nuclear transcription factor Y subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17013.17013.4 27.4 25.24 20.319 2 1 1 0 806.1313 3141.5345 S326s TMT10 323 (K) EKDsPHMQDPNQADEEAMTQIIR (V) EKDS(0.99)PHMQDPNQADEEAMT(0.0)QIIR K:TMT10,s:Phosphorylated S NFYA 36876 5 2 4355.1 32.82 HUMAN 1 24.1587 29.5792 FSPVRRFSDGAASIQ-p H0Y494;S626-p FSPVRRFSDGAASIQ 0.112544694105773 0.0290715127905011 -0.333 0.294 19.8031737461112 20.80058537931 -0.333 0.294 0.0104636360484298 0.00831651666411023 -3.83683608888472 4.04892642338494 H0Y494 SIK3 H0Y494.S626.p_SIK3 H0Y494_S626s _1_1_626_626 H0Y494 J3KPC8|Q9Y2K2|H0Y494|Q9Y2K2-4|Q9Y2K2-3 Serine/threonine-protein kinase SIK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19041.19041.3 9.28 9.28 5.476 2 1 1 0 646.0078 1856.0431 S626s TMT10 624 (R) RFsDGAASIQAFK (A) RFS(0.99)DGAAS(0.0)IQAFK K:TMT10,s:Phosphorylated S SIK3 139782.1 2 7 1025.2 187.04 HUMAN 1 -19.8032 20.8006 FSPWQILSPVQWAKW-p O75410;S10-p FSPWQILSPVQWAKW 0.688287844973563 0.00318126189359855 -0.0626666666666667 -0.795666666666667 3.04531737539912 37.4876867833735 -0.0667951748591364 -0.795666666666667 0.49598468031149 0.000178332838265315 -0.72960183246573 -9.05678792768386 O75410 TACC1 O75410.S10.p_TACC1 O75410_S10s _1_1_10_10 O75410 O75410-2|O75410-6 Transforming acidic coiled-coil-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.37864.37864.2 17.11 17.11 3.319 2 1 1 0 1055.0426 2029.1109 S10s Acetyl 2 (M) AFSPWQILsPVQWAK (W) AFS(0.0)PWQILS(0.99)PVQWAK K:TMT10,s:Phosphorylated S TACC1 88648.6 3 2 442.1 311.73 HUMAN 1 -3.0453 -37.4877 FSQEPGPSPEGPMPL-p Q6IBW4-4;S246-p FSQEPGPSPEGPMPL 0.490436279608053 0.0189342040006697 0.127333333333333 -0.454 5.7025896602831 23.697913050788 0.127333333333333 -0.454 0.268993034350605 0.00426784555651319 1.23139578101218 -4.7158883149606 Q6IBW4 NCAPH2 Q6IBW4.4.S246.p_NCAPH2 Q6IBW4-4_S246s _1_1_246_246 Q6IBW4-4 Q6IBW4-4|A0A0A6YYG7|Q6IBW4-2|Q6IBW4-5 Isoform 4 of Condensin-2 complex subunit H2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31725.31725.5 23.76 18.72 6.128 4 1 1 0 962.8654 4730.3071 S246s TMT10 232 (R) SPVPALGFSQEPGPsPEGPMPLGGGEDEDAEEAVELPEASAPK (A) S(0.0)PVPALGFS(0.0)QEPGPS(0.99)PEGPMPLGGGEDEDAEEAVELPEAS(0.0)APK K:TMT10,s:Phosphorylated S NCAPH2 68752.9 2 5 1022.1 187.64 HUMAN 1 5.7026 -23.6979 FSQESEVSE______-p Q6KB66;S451-p FSQESEVSE______ 0.375335157640682 0.283191653184112 0.127 0.109333333333333 7.87462224329251 7.22396213434096 0.127 0.109333333333333 0.163131479758527 0.189497631676197 1.61340315017404 1.49973474055792 Q6KB66 KRT80 Q6KB66.S451.p_KRT80 Q6KB66_S451s _1_1_451_451 Q6KB66 Q6KB66-3 Keratin, type II cytoskeletal 80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16109.16109.2 10.61 10.61 4.821 4 1 1 0 757.3191 1433.6634 S451s TMT10 443 (K) YFSQESEVsE (-) Y(0.0)FS(0.0)QES(0.0)EVS(0.99)E s:Phosphorylated S KRT80 51037.9 2 57 69.3 672.47 HUMAN 1 7.8746 7.224 FSQQFLDSPAKALAK-p Q96T37;S935-p FSQQFLDSPAKALAK 0.954973700577966 0.0346955935259337 -0.00866666666666667 0.266666666666667 0.39316207968735 19.6592157912414 -0.00866666666666667 0.266666666666667 0.913447921737088 0.0108162924425806 -0.113868101405868 3.80271188636387 Q96T37 RBM15 Q96T37.S935.p_RBM15 Q96T37_S935s _1_1_935_935 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25320.25320.4 19.83 18.61 2.853 3 1 1 0 933.225 3649.8928 S935s TMT10 913 (K) DKENTGVLHAFPPCEFSQQFLDsPAK (A) DKENT(0.0)GVLHAFPPCEFS(0.0)QQFLDS(0.99)PAK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RBM15 107414.9 8 31 55.1 724.11 HUMAN 1 -0.3932 19.6592 FSRASVGSPSSGEGH-p O60292;S451-p FSRASVGSPSSGEGH 0.191102046396083 0.520616380538713 0.259333333333333 0.078 14.0370031711219 3.80848786983156 0.259333333333333 0.0780000000000001 0.0394729589436897 0.416055447812431 2.69971486688088 0.880196289529853 O60292 SIPA1L3 O60292.S451.p_SIPA1L3 O60292_S451s _1_1_451_451 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14965.14965.3 15.56 15.56 1.116 6 1 1 0 818.0623 2372.2044 S451s TMT10 447 (R) ASVGsPSSGEGHLAEPALSAYR (T) AS(0.0)VGS(0.99)PS(0.0)S(0.0)GEGHLAEPALS(0.0)AY(0.0)R s:Phosphorylated S SIPA1L3 195918.6 1 12 144.1 520.25 HUMAN 1 14.037 3.8085 FSRLHMYSPPQCVPE-p O94901-9;S10-p FSRLHMYSPPQCVPE 0.427656291446883 0.143072834818274 0.171 -0.172666666666667 6.79300505399457 11.1264053953832 0.171 -0.172666666666667 0.209266395843607 0.0771541800980148 1.42472894250389 -2.17727477795078 O94901 SUN1 O94901.9.S10.p_SUN1 O94901-9_S10s _1_1_10_10 O94901-9 O94901-9|E9PHI4|O94901-8 Isoform 9 of SUN domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29142.29142.5 18.32 18.32 3.718 14 1 1 0 1138.7285 5609.6558 S10s TMT10 6 (R) LHMYsPPQCVPENTGYTYALSSSYSSDALDFETEHKLDPVFDSPR (M) LHMY(0.0)S(0.99)PPQCVPENT(0.0)GY(0.0)T(0.0)Y(0.0)ALS(0.0)S(0.0)S(0.0)Y(0.0)S(0.0)S(0.0)DALDFET(0.0)EHKLDPVFDS(0.0)PR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SUN1 102843.3 1 1 1711.1 120.02 HUMAN 1 6.793 -11.1264 FSRRLNHSPPQSSSR-p Q5T8P6-3;S127-p FSRRLNHSPPQSSSR 0.213471996452265 0.0394532304370001 0.244 0.252 12.933701813196 18.8335831114513 0.244 0.252 0.0508896915643735 0.0130810223851005 2.49912718052791 3.62982882027416 Q5T8P6 RBM26 Q5T8P6.3.S127.p_RBM26 Q5T8P6-3_S127s_1_1_127_127 Q5T8P6-3 A0A087X0H9|Q5T8P6|Q5T8P6-2|Q5T8P6-3 Isoform 3 of RNA-binding protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3199.3199.3 14.81 14.81 5.9 4 1 1 0 559.2739 1594.8611 N125n S127s TMT10 123 (R) RLnHsPPQSSSR (Y) RLN(1.0)HS(0.99)PPQS(0.0)S(0.0)S(0.0)R n:Deamidated,s:Phosphorylated S RBM26 111063.2 15 1 2123.1 96.71 HUMAN 1 12.9337 18.8336 FSRSLSRTPSPPPFR-p Q7L4I2;T220-p FSRSLSRTPSPPPFR 0.839353804661943 0.0079657699052288 -0.035 0.522 1.46959292304352 29.926305965119 -0.035 0.522 0.712919851063564 0.00101711346442488 -0.387849401352693 6.39962227704156 Q7L4I2 RSRC2 Q7L4I2.T220.p_RSRC2 Q7L4I2_T220tS222s_2_2_220_222 Q7L4I2 Q7L4I2|Q7L4I2-2 Arginine/serine-rich coiled-coil protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13293.13293.3 8.06 4.53 1.174 4 2 2 0 577.6122 1570.8903 T220t S222s TMT10 216 (R) SLSRtPsPPPFR (G) S(0.0)LS(0.0)RT(0.99)PS(0.99)PPPFR t:Phosphorylated T,s:Phosphorylated S RSRC2 50615.9 1 11 1070.1 180.75 HUMAN 1 -1.4696 29.9263 FSRSRQPSPLLLLPP-p I3L2J0;S780-p FSRSRQPSPLLLLPP 0.808619784993991 0.0734851151622655 0.0583333333333333 0.206666666666667 1.77274862389038 15.0535356916905 0.0583333333333333 0.206666666666667 0.664852241997556 0.0312353538940102 0.457865992551428 2.88660599657855 I3L2J0 NotFound I3L2J0.S780.p_NotFound I3L2J0_S780s_1_1_780_780 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36246.36246.3 25.16 22.71 13.7 4 1 1 0 791.4128 2309.2864 Q778q S780s Hydrogen 778 (R) qPsPLLLLPPPAGLTSDPGPSVR (R) Q(1.0)PS(0.99)PLLLLPPPAGLT(0.0)S(0.0)DPGPS(0.0)VR q:Pyroglutamic acid,s:Phosphorylated S CIC 259056.7 17 17 23.1 999.57 HUMAN 1 1.7727 15.0535 FSRSSRGSLNGGNRV-p Q2LD37;S2628-p FSRSSRGSLNGGNRV 0.375644567259488 0.0593701696406493 0.135333333333333 0.243333333333333 7.86209289859473 16.3408575796031 0.135333333333333 0.243333333333333 0.163602791695795 0.0232227818241484 1.61122797756236 3.1316436631975 Q2LD37 KIAA1109 Q2LD37.S2628.p_KIAA1109 Q2LD37_S2628s _1_1_2628_2628 Q2LD37 Q2LD37|Q2LD37-4 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4102.4102.3 8.87 8.62 99 1 1 1 0 537.2723 1529.8346 S2628s Hydrogen 2627 (R) GsLNGGNRVNNAK (N) GS(1.0)LNGGNRVNNAK K:TMT10-Lys-Only,s:Phosphorylated S KIAA1109 559693.9 2 16 143.1 520.8 HUMAN 1 7.8621 16.3409 FSRYDEGSGGSGDEG-p O94762;S488-p FSRYDEGSGGSGDEG 0.79879406065728 0.107252004257257 -0.045 0.187333333333333 1.8802398797017 12.8077317608128 -0.045 0.187333333333333 0.648598607641182 0.0523873974766916 -0.482113873682272 2.47514418777397 O94762 RECQL5 O94762.S488.p_RECQL5 O94762_S488sS491s_2_2_488_491 O94762 O94762|O94762-4 ATP-dependent DNA helicase Q5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5763.5763.4 10.75 10.75 4.299 3 2 2 0 621.7575 2324.0791 S488s S491s TMT10 484 (R) YDEGsGGsGDEGRDEAHK (R) Y(0.0)DEGS(0.99)GGS(0.99)GDEGRDEAHK K:TMT10,s:Phosphorylated S RECQL5 110568 9 9 823.1 218.4 HUMAN 1 -1.8802 12.8077 FSSGIDQSPGMSPVP-p O95359;S197-p FSSGIDQSPGMSPVP 0.291864377986462 0.948168902471137 -0.179 0.00700000000000002 10.0866198488574 0.330779182481739 -0.179 0.00700000000000003 0.0980252627598996 0.926663552608606 -1.99676339272215 0.0964030100805942 O95359 TACC2 O95359.S197.p_TACC2 O95359_S197s _1_1_197_197 O95359 O95359|E9PBC6|O95359-3|E7EMZ9 Transforming acidic coiled-coil-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26032.26032.4 7.6 7.6 1.412 7 1 1 0 802.394 3126.6004 S197s TMT10 186 (K) SSFSFSSGIDQsPGMSPVPLREPMK (A) S(0.0)S(0.0)FS(0.0)FS(0.0)S(0.0)GIDQS(0.99)PGMS(0.0)PVPLREPMK K:TMT10,s:Phosphorylated S TACC2 311818.1 2 4 101.1 597.93 HUMAN 1 -10.0866 0.3308 FSSPADDSMDR____-p Q9NZL4-3;S402-p FSSPADDSMDR____ 0.664945111459205 0.13383639035726 0.065 -0.205 3.3151460239334 11.5128204760052 0.065 -0.205 0.466106755712933 0.0705858993298747 0.783726345080981 -2.24514122266881 Q9NZL4 HSPBP1 Q9NZL4.3.S402.p_HSPBP1 Q9NZL4-3_S402s _1_1_402_402 Q9NZL4-3 Q9NZL4-3|Q9NZL4-2 Isoform 3 of Hsp70-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22488.22488.3 17.11 17.11 2.321 4 1 1 0 717.9823 2071.9626 S402s TMT10 390 (K) LLQTCFSSPADDsMDR (-) LLQT(0.0)CFS(0.0)S(0.0)PADDS(0.99)MDR C:Carbamidomethylation,s:Phosphorylated S HSPBP1 45271.9 5 2 5646.1 17.5 HUMAN 1 3.3151 -11.5128 FSSRRSQSPVKCIRP-p G1UD79;S171-p FSSRRSQSPVKCIRP 0.0371731170194768 0.00112205987963851 0.732 1.27333333333333 32.6773550952362 49.3402388123068 0.732 1.27333333333333 0.000539839290936977 1.16406201754975e-05 7.28992453273323 15.2502880000183 G1UD79 FAM122B G1UD79.S171.p_FAM122B G1UD79_S171s _1_1_171_171 G1UD79 G1UD79|Q7Z309-3|Q7Z309-2|Q7Z309-4|Q7Z309-5 Protein FAM122B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3721.3721.3 7.95 3.38 2.816 2 1 1 0 447.255 1259.7836 S171s TMT10 168 (R) RSQsPVK (C) RS(0.0)QS(0.99)PVK K:TMT10,s:Phosphorylated S SPACIA2 29414.5 1 8 835.1 215.14 HUMAN 1 32.6774 49.3402 FSSSIENSDSPVRSI-p O95425-2;S492-p FSSSIENSDSPVRSI 0.23797684518109 0.0152850768162054 -0.184 -0.486 11.9360827002573 25.1183823385989 -0.184 -0.486 0.0640312131248817 0.00307724281363135 -2.32100255851668 -5.06745810355789 O95425 SVIL O95425.2.S492.p_SVIL O95425-2_S492s_1_1_492_492 O95425-2 O95425|O95425-3|O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22934.22934.3 10.23 10.23 1.216 6 1 1 0 802.4243 2324.2862 N491n S492s TMT10 485 (K) FSSSIEnsDSPVRSILK (S) FS(0.0)S(0.0)S(0.0)IEN(1.0)S(0.99)DS(0.0)PVRS(0.0)ILK K:TMT10,n:Deamidated,s:Phosphorylated S SVIL 202384.1 2 14 406.2 324.74 HUMAN 1 -11.9361 -25.1184 FSSSRKASDGNCTLP-p I6L8A6;S539-p FSSSRKASDGNCTLP 0.0842705885662381 0.0160698718012273 -0.498333333333333 0.739 22.9795944826792 24.7810482602757 -0.498333333333333 0.739 0.00503547624754985 0.0033257926866496 -4.54960517333538 4.98238815003338 I6L8A6 NotFound I6L8A6.S539.p_NotFound I6L8A6_S539s _1_1_539_539 I6L8A6 Q99708-2|I6L8A6|Q99708-3 DNA endonuclease RBBP8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9972.9972.3 8.32 8.32 1.768 2 1 1 0 653.3515 1878.0722 S539s TMT10 537 (R) KAsDGNCTLPK (D) KAS(0.99)DGNCT(0.0)LPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RBBP8 103921.2 1 8 258.1 398.22 HUMAN 1 -22.9796 24.781 FSSTPVISPAPNSTP-p A3KN83;S823-p FSSTPVISPAPNSTP 0.860922112893642 0.930938262261506 0.0296666666666667 0.011 1.2703254766082 0.438628491577901 0.0296666666666667 0.011 0.746392818830685 0.903934892633295 0.340376630941181 0.126446978766015 A3KN83 SBNO1 A3KN83.S823.p_SBNO1 A3KN83_S823s_1_1_823_823 A3KN83 A3KN83|A3KN83-2|A3KN83-3 Protein strawberry notch homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17914.17914.4 26.57 23.32 0.5 14 1 1 0 1061.0148 4160.0693 S823s N836n TMT10 813 (K) RPSFSSTPVIsPAPNSTPANSNTnSNSSLITSQDAVER (A) RPS(0.0)FS(0.0)S(0.0)T(0.0)PVIS(0.99)PAPN(0.0)S(0.0)T(0.0)PAN(0.0)S(0.0)N(0.33)T(0.0)N(0.33)S(0.0)N(0.33)S(0.0)S(0.0)LIT(0.0)S(0.0)QDAVER s:Phosphorylated S,n:Deamidated SBNO1 154994.1 1 7 861.1 210.54 HUMAN 1 1.2703 0.4386 FSTAQHAS_______-p P14866;S589-p FSTAQHAS_______ 0.446920841258647 0.0529874973043397 0.138 0.237666666666667 6.45190341932447 17.0130760711332 0.138 0.237666666666667 0.226365198016522 0.0198926386109471 1.36468775122526 3.26272214046766 P14866 HNRNPL P14866.S589.p_HNRNPL P14866_S589s _1_1_589_589 P14866 P14866|P14866-2 Heterogeneous nuclear ribonucleoprotein L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15357.15357.2 14.17 14.17 14.167 3 1 1 0 715.822 1350.6674 S589s TMT10 580 (K) LCFSTAQHAs (-) LCFS(0.0)T(0.0)AQHAS(0.99) C:Carbamidomethylation,s:Phosphorylated S HNRNPL 64759.2 3 10 846.1 213.74 HUMAN 1 6.4519 17.0131 FSTLPKISPSSLSNN-p Q9Y4E8;S242-p FSTLPKISPSSLSNN 0.511272956349633 0.0198882065982857 -0.0913333333333333 -0.379333333333333 5.38492069597629 23.3364194803871 -0.0913333333333333 -0.379333333333333 0.289406266340046 0.00463829163830343 -1.17415245796469 -4.6291271568908 Q9Y4E8 USP15 Q9Y4E8.S242.p_USP15 Q9Y4E8_S242s _1_1_242_242 Q9Y4E8 Q9Y4E8 Ubiquitin carboxyl-terminal hydrolase 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16430.16430.3 14.17 14.17 1.233 5 1 1 0 711.9906 2053.9923 S242s TMT10 241 (K) IsPSSLSNNYNNMNNR (N) IS(0.99)PS(0.0)S(0.0)LS(0.0)NNY(0.0)NNMNNR s:Phosphorylated S USP15 113672.2 3 5 1214.1 165.83 HUMAN 1 -5.3849 -23.3364 FSVAVSPSLDLSKIK-p P21333-2;S968-p FSVAVSPSLDLSKIK 0.0745793811074775 0.467371419414131 -0.452333333333333 -0.0736666666666667 24.1639301975919 4.40417997467355 -0.452333333333333 -0.0736666666666667 0.00383360162303475 0.36272876943086 -4.83509519032507 -0.993461581795849 P21333 FLNA P21333.2.S968.p_FLNA P21333-2_S968s _1_1_968_968 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54|A0A087WWY3 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28436.28436.3 11.12 11.12 1.307 5 1 1 0 691.3739 1992.1418 S968s TMT10 959 (K) SPFSVAVSPsLDLSK (I) S(0.0)PFS(0.0)VAVS(0.0)PS(0.99)LDLS(0.0)K K:TMT10,s:Phosphorylated S FLNA 282751.6 1 5 198.1 454.47 HUMAN 1 -24.1639 -4.4042 FSVIRPQTPPPQTPS-p Q8IY92;T1315-p FSVIRPQTPPPQTPS 0.415867049320734 0.742060172480771 0.137666666666667 -0.0516666666666667 7.03143721529413 1.78585914795142 0.137666666666667 -0.0516666666666666 0.198087138547538 0.662848206006379 1.46651501629892 -0.460787392146289 Q8IY92 SLX4 Q8IY92.T1315.p_SLX4 Q8IY92_T1315t _1_1_1315_1315 Q8IY92 Q8IY92|Q8IY92-2 Structure-specific endonuclease subunit SLX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18025.18025.4 11.4 5.84 2.617 9 1 1 0 883.6942 3451.7954 T1315t TMT10 1308 (K) FSVIRPQtPPPQTPSSCLTPVSPGTSDGRR (Q) FS(0.0)VIRPQT(0.99)PPPQT(0.0)PS(0.0)S(0.0)CLT(0.0)PVS(0.0)PGT(0.0)S(0.0)DGRR C:Carbamidomethylation,t:Phosphorylated T SLX4 201834.1 3 19 218.1 430.83 HUMAN 1 7.0314 -1.7859 FSVKRRFSDFLGLHS-p O60749;S185-p FSVKRRFSDFLGLHS 0.655422066970777 0.0515572783410691 -0.0723333333333333 0.321 3.4410844653416 17.1851927044758 -0.0723333333333333 0.321 0.452784502157491 0.0191196848515238 -0.808661986166401 3.2966532433092 O60749 SNX2 O60749.S185.p_SNX2 O60749_S185s _1_1_185_185 O60749 O60749|O60749-2 Sorting nexin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18446.18446.3 16.83 12.25 7.062 2 1 1 0 539.2782 1535.8532 S185s Hydrogen 183 (R) RFsDFLGLHSK (L) RFS(0.99)DFLGLHS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S SNX2 58584.2 10 2 1560.2 131.56 HUMAN 1 -3.4411 17.1852 FSVRRRESLSYIPKG-p A1L390;S741-p FSVRRRESLSYIPKG 0.0611233751023293 0.0057051108332702 -0.417 -0.696333333333333 26.4969276194309 32.4917387331702 -0.417 -0.696333333333334 0.0022403054637556 0.00056341204408632 -5.43316946471094 -7.21484895809492 A1L390 PLEKHG3 A1L390.S741.p_PLEKHG3 A1L390_S741s _1_1_741_741 A1L390 A1L390|A1L390-3|A1L390-2|G3V311 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10023.10023.4 8.86 6.19 2.07 3 1 1 0 447.5045 1707.0318 S741s TMT10 738 (R) RREsLSYIPK (G) RRES(0.99)LS(0.0)Y(0.0)IPK K:TMT10,s:Phosphorylated S PLEKHG3 135322.7 3 11 284.1 386.18 HUMAN 1 -26.4969 -32.4917 FSWASVTSKNLPPSG-p Q13283;S256-p FSWASVTSKNLPPSG 0.927873054334042 0.265044526652652 -0.0136666666666667 -0.157 0.643945417225522 7.59447489316982 -0.0136666666666667 -0.157 0.862194917198176 0.174001307085005 -0.182015500415885 -1.56425332189335 Q13283 G3BP1 Q13283.S256.p_G3BP1 Q13283_S256s _1_1_256_256 Q13283 Q13283 Ras GTPase-activating protein-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23186.23186.3 12.12 12.12 1.155 5 1 1 0 551.2883 1571.8834 S256s TMT10 248 (R) TFSWASVTsK (N) T(0.0)FS(0.0)WAS(0.0)VT(0.0)S(0.99)K K:TMT10,s:Phosphorylated S G3BP1 52220.4 2 8 1003.1 189.39 HUMAN 1 -0.6439 -7.5945 FTALSSESIENLPSV-p Q92538-3;S991-p FTALSSESIENLPSV 0.477174093261756 0.977525394132222 -0.139333333333333 -0.00433333333333332 5.9132139763279 0.141584445118554 -0.139333333333333 -0.00433333333333333 0.256258690397646 0.967924661974612 -1.26908792315964 -0.0421015548839688 Q92538 GBF1 Q92538.3.S991.p_GBF1 Q92538-3_S991s _1_1_991_991 Q92538-3 Q92538|Q92538-2|Q92538-3 Isoform 3 of Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32589.32589.4 19.67 19.67 2.118 6 1 1 0 691.359 2682.4391 S991s TMT10 984 (K) FTALSSEsIENLPSVFGSNPK (A) FT(0.0)ALS(0.0)S(0.0)ES(0.99)IENLPS(0.0)VFGS(0.0)NPK K:TMT10,s:Phosphorylated S GBF1 208066.7 1 7 543.1 276.05 HUMAN 1 -5.9132 -0.1416 FTATEPQYQPGENL_-p J3QRU1;Y542-p FTATEPQYQPGENL_ 0.784610264714199 0.0263080103568939 -0.0533333333333334 0.484666666666667 2.0287589861157 21.4733363431027 -0.0533333333333334 0.484666666666667 0.626792947680645 0.00712305611477597 -0.515161545766618 4.19821954444017 J3QRU1 NotFound J3QRU1.Y542.p_NotFound J3QRU1_Y542y _1_1_542_542 J3QRU1 J3QRU1|P07947 Tyrosine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.37460.37460.4 23.28 23.28 2.869 7 1 1 0 1037.9702 4068.8865 Y542y TMT10 517 (K) DPDERPTFEYIQSFLEDYFTATEPQyQPGENL (-) DPDERPT(0.0)FEY(0.0)IQS(0.0)FLEDY(0.0)FT(0.0)AT(0.0)EPQY(0.99)QPGENL y:Phosphorylated Y YES1 61899.4 4 7 1289.1 157.77 HUMAN 1 -2.0288 21.4733 FTEDCPKSLLIPYLD-p O00410-3;S494-p FTEDCPKSLLIPYLD 0.113128338411947 0.0048975805709655 -1.09 1.37 19.7465012073266 33.7193081843352 -1.09 1.37 0.0106010743218919 0.000424687209720496 -3.82475677355608 7.63443621740889 O00410 IPO5 O00410.3.S494.p_IPO5 O00410-3_S494s _1_1_494_494 O00410-3 O00410-3|O00410-2 Isoform 3 of Importin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36795.36795.3 14.75 14.75 8.507 2 1 1 0 642.7104 1846.1454 S494s TMT10 494 (K) sLLIPYLDNLVK (H) S(0.99)LLIPY(0.0)LDNLVK K:TMT10,s:Phosphorylated S IPO5 127026.3 1 1 2973.1 64.3 HUMAN 1 -19.7465 33.7193 FTEKIMATPEQVGKM-p P12956;T455-p FTEKIMATPEQVGKM 0.819353128431646 0.101622256507743 0.033 0.188 1.66740904696737 13.1172926443007 0.033 0.188 0.681175619366344 0.0487832506062183 0.433819244443403 2.53082049859809 P12956 XRCC6 P12956.T455.p_XRCC6 P12956_T455t_1_1_455_455 P12956 P12956|P12956-2|B1AHC9 X-ray repair cross-complementing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12892.12892.2 11.76 11.76 99 1 1 1 0 814.432 1531.8918 M453m T455t TMT10 452 (K) ImAtPEQVGK (M) IM(1.0)AT(1.0)PEQVGK K:TMT10,m:Oxidized methionine,t:Phosphorylated T XRCC6 70127.1 8 11 815.1 220.5 HUMAN 1 1.6674 13.1173 FTFSSPASGRSIRSP-p Q6P1X5;S1188-p FTFSSPASGRSIRSP 0.564405993858839 0.0419555254066933 -0.083 0.485333333333333 4.57717079401544 18.4561817534856 -0.083 0.485333333333333 0.348564312876045 0.0142686151576636 -1.02596918709952 3.55218182005492 Q6P1X5 TAF2 Q6P1X5.S1188.p_TAF2 Q6P1X5_S1188s _1_1_1188_1188 Q6P1X5 Q6P1X5 Transcription initiation factor TFIID subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16383.16383.3 8.47 8.47 1.241 4 1 1 0 688.6787 1984.054 S1188s TMT10 1177 (K) DKEPFTFSSPAsGR (S) DKEPFT(0.0)FS(0.0)S(0.0)PAS(0.99)GR K:TMT10,s:Phosphorylated S TAF2 138452.4 1 3 3688.1 45.35 HUMAN 1 -4.5772 18.4562 FTFTRGLSVREILAE-p P08559-4;S168-p FTFTRGLSVREILAE 0.745630133301169 0.00313569181156438 0.0523333333333333 0.734333333333333 2.41940672917242 37.6087734457604 0.0523333333333333 0.734333333333334 0.572874283508355 0.000173429373572311 0.599802129074653 9.10612438257117 P08559 PDHA1 P08559.4.S168.p_PDHA1 P08559-4_S168s _1_1_168_168 P08559-4 P08559-4|P08559-2|P08559-3|Q5JPU0 Isoform 4 of Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36066.36066.3 9.4 9.4 9.404 2 1 1 0 608.3389 1743.0326 S168s TMT10 166 (R) GLsVREILAELTGR (K) GLS(0.99)VREILAELT(0.0)GR s:Phosphorylated S PDHA1 48320.5 1 1 1899.1 108.34 HUMAN 1 2.4194 37.6088 FTGFRKISLDDLRKA-p Q9ULJ7;S253-p FTGFRKISLDDLRKA 0.180506867288736 0.268485884048356 -0.245666666666667 0.133 14.6638024943321 7.52059063054246 -0.245666666666667 0.133 0.0341680151171963 0.176986824392441 -2.81563165049694 1.55140567456114 Q9ULJ7 ANKRD50 Q9ULJ7.S253.p_ANKRD50 Q9ULJ7_S253s _1_1_253_253 Q9ULJ7 Q9ULJ7|Q9ULJ7-2 Ankyrin repeat domain-containing protein 50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16717.16717.4 7.56 2.98 99 1 1 1 0 464.5321 1775.1358 S253s TMT10 251 (R) KIsLDDLRK (A) KIS(1.0)LDDLRK K:TMT10,s:Phosphorylated S ANKRD50 157796.3 2 2 1875.1 109.69 HUMAN 1 -14.6638 7.5206 FTGNVQNSLLDEEKA-p Q5VT06;S1195-p FTGNVQNSLLDEEKA 0.616312626410794 0.828425491551784 0.11 -0.029 3.89990290196079 1.14294246483659 0.11 -0.029 0.407389385971503 0.768609509703087 0.8979469735604 -0.309328367045415 Q5VT06 CEP350 Q5VT06.S1195.p_CEP350 Q5VT06_S1195s _1_1_1195_1195 Q5VT06 Q5VT06 Centrosome-associated protein 350 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27970.27970.4 13.66 13.66 5.301 4 1 1 0 838.1766 3269.7145 S1195s TMT10 1180 (K) EKTEWLDSFTGNVQNsLLDEEK (A) EKT(0.0)EWLDS(0.0)FT(0.0)GNVQNS(0.99)LLDEEK K:TMT10,s:Phosphorylated S CEP350 352521.4 1 9 265.1 395.34 HUMAN 1 3.8999 -1.1429 FTHKRTYSDEANQMR-p A0A1B0GTL5;S307-p FTHKRTYSDEANQMR 0.118727214055873 0.0197263100945659 -0.523333333333333 -0.477333333333333 19.2458735179839 23.3965122741871 -0.523333333333333 -0.477333333333333 0.0118963202851783 0.00457455414769409 -3.71894320910393 -4.64347616532253 A0A1B0GTL5 NotFound A0A1B0GTL5.S307.p_NotFound A0A1B0GTL5_S307s _1_1_307_307 A0A1B0GTL5 A0A1B0GTL5|Q9BXF6 Rab11 family-interacting protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5302.5302.2 12.08 12.08 1.254 3 1 1 0 647.7427 1214.5106 S307s Hydrogen 305 (R) TYsDEANQMR (V) T(0.0)Y(0.0)S(0.99)DEANQMR s:Phosphorylated S RAB11FIP5 139038.8 8 8 714.1 238.09 HUMAN 1 -19.2459 -23.3965 FTHPPDQSPLRPDAA-p Q9BYX2;S436-p FTHPPDQSPLRPDAA 0.507491654308782 0.164243282220676 -0.122333333333333 -0.276 5.43407023711936 10.3151761544611 -0.122333333333333 -0.276 0.286149490052442 0.0929998792248748 -1.18304254353788 -2.03567186041593 Q9BYX2 TBC1D2 Q9BYX2.S436.p_TBC1D2 Q9BYX2_S436s _1_1_436_436 Q9BYX2 Q9BYX2|Q9BYX2-2|Q9BYX2-3 TBC1 domain family member 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17873.17873.4 12.4 12.4 2.276 4 1 1 0 951.7294 3723.9243 S436s TMT10 425 (K) VTQDFTHPPDQsPLRPDAANRDFLSQQGK (I) VT(0.0)QDFT(0.0)HPPDQS(0.99)PLRPDAANRDFLS(0.0)QQGK K:TMT10,s:Phosphorylated S TBC1D2 106324.8 2 1 4023.1 38.94 HUMAN 1 -5.4341 -10.3152 FTIQLQLSQKSSESE-p Q5SW79;S122-p FTIQLQLSQKSSESE 0.0906315365820643 0.679365727825634 -0.59 0.066 22.1695452806919 2.29484347063024 -0.59 0.066 0.00606799860022227 0.589543225128808 -4.36080802726478 0.573080280793805 Q5SW79 CEP170 Q5SW79.S122.p_CEP170 Q5SW79_S122s _1_1_122_122 Q5SW79 Q5SW79|Q5SW79-3 Centrosomal protein of 170 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28005.28005.3 12.16 9.42 6.407 2 1 1 0 581.9982 1664.0147 S122s TMT10 115 (K) FTIQLQLsQK (S) FT(0.0)IQLQLS(0.99)QK K:TMT10,s:Phosphorylated S CEP170 175689.3 1 3 128.1 537.52 HUMAN 1 -22.1695 2.2948 FTKDPGRSPGRPAHW-p Q9Y219;S1208-p FTKDPGRSPGRPAHW 0.0635370415880919 0.00159168462790637 -0.403 -1.254 25.8800626733455 44.8458462340576 -0.403 -1.254 0.00258222292612306 3.27653926367624e-05 -5.27017873573377 -12.5414627071745 Q9Y219 JAG2 Q9Y219.S1208.p_JAG2 Q9Y219_S1208s _1_1_1208_1208 Q9Y219 Q9Y219|Q9Y219-2 Protein jagged-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6422.6422.4 16.2 16.2 6.835 2 1 1 0 578.5519 2231.2198 S1208s TMT10 1204 (K) DPGRsPGRPAHWASGPK (V) DPGRS(0.99)PGRPAHWAS(0.0)GPK K:TMT10,s:Phosphorylated S JAG2 140781.4 2 2 3991.1 39.51 HUMAN 1 -25.8801 -44.8458 FTKDRYDSFIELQEK-p Q9NSD9;S138-p FTKDRYDSFIELQEK 0.181399305482146 0.211779819032832 -0.208333333333333 -0.131666666666667 14.6060065542909 8.86884311158239 -0.208333333333333 -0.131666666666667 0.0346257623977881 0.129752486403985 -2.80487879829236 -1.78502729024932 Q9NSD9 FARSB Q9NSD9.S138.p_FARSB Q9NSD9_S138s _1_1_138_138 Q9NSD9 Q9NSD9|Q9NSD9-2 Phenylalanine--tRNA ligase beta subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19414.19414.3 11.7 4.86 11.697 2 1 1 0 694.351 2001.0693 S138s TMT10 134 (K) DRYDsFIELQEK (L) DRY(0.0)DS(0.99)FIELQEK K:TMT10,s:Phosphorylated S FARSB 66742 1 1 5386.1 19.8 HUMAN 1 -14.606 -8.8688 FTKNTDLSLEGDPFS-p Q8IZE3-2;S435-p FTKNTDLSLEGDPFS 0.957810192524261 0.614604205436038 0.00799999999999999 0.0486666666666667 0.363810863632734 2.87449350746312 0.00799999999999999 0.0486666666666667 0.919642246443605 0.515882325936206 0.105681440430215 0.694707968759327 Q8IZE3 SCYL3 Q8IZE3.2.S435.p_SCYL3 Q8IZE3-2_S435s_1_1_435_435 Q8IZE3-2 Q8IZE3-2 Isoform 2 of Protein-associating with the carboxyl-terminal domain of ezrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.33638.33638.4 18.75 18.75 2.273 4 1 1 0 900.7288 3518.935 S435s N450n TMT10 431 (K) NTDLsLEGDPFSQPIKFPInGLSDVK (N) N(0.0)T(0.0)DLS(0.99)LEGDPFS(0.0)QPIKFPIN(0.99)GLS(0.0)DVK K:TMT10,s:Phosphorylated S,n:Deamidated SCYL3 77470.8 4 1 1163.1 171.02 HUMAN 1 0.3638 2.8745 FTKRQAFTPSSTMME-p Q14157-5;T425-p FTKRQAFTPSSTMME 0.656250820343572 0.0494534769202175 -0.0853333333333333 -0.459 3.43260774884889 17.4647085277486 -0.0853333333333334 -0.459 0.453669126335708 0.0179278886949942 -0.806989777783172 -3.35208908603245 Q14157 UBAP2L Q14157.5.T425.p_UBAP2L Q14157-5_T425t_1_1_425_425 Q14157-5 Q14157-5|F8W726|Q14157-3|Q14157-1|Q14157-4 Isoform 5 of Ubiquitin-associated protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.38113.38113.3 14.48 10.98 1.166 4 1 1 0 756.0175 2203.0976 Q422q T425t Hydrogen 422 (R) qAFtPSSTMMEVFLQEK (S) Q(1.0)AFT(0.99)PS(0.0)S(0.0)T(0.0)MMEVFLQEK K:TMT10-Lys-Only,q:Pyroglutamic acid,t:Phosphorylated T UBAP2L 116866.1 7 13 189.1 467.5 HUMAN 1 -3.4326 -17.4647 FTKRSTQSEDFSRRH-p Q9UJF2-2;S982-p FTKRSTQSEDFSRRH 0.567448794445481 0.823933222349353 0.125333333333333 0.0243333333333333 4.53094414503959 1.17845614747187 0.125333333333333 0.0243333333333333 0.352294274847144 0.762349965978325 1.01735381049361 0.318029960912101 Q9UJF2 RASAL2 Q9UJF2.2.S982.p_RASAL2 Q9UJF2-2_S982s _1_1_982_982 Q9UJF2-2 Q9UJF2-2 Isoform 2 of Ras GTPase-activating protein nGAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6300.6300.2 13.98 13.98 2.559 4 1 1 0 683.2988 1285.6222 S982s TMT10 979 (R) STQsEDFSR (R) S(0.0)T(0.0)QS(0.99)EDFS(0.0)R s:Phosphorylated S RASAL2 145265.6 2 39 281.2 388.28 HUMAN 1 4.5309 1.1785 FTLGRHYSQDCSSIK-p Q9P227;S598-p FTLGRHYSQDCSSIK 0.0495990523839634 0.00918501714402282 -0.475666666666667 -0.434666666666667 28.845994578972 28.7883073721565 -0.475666666666667 -0.434666666666667 0.00130436922048372 0.00132181069890678 -6.08855517294415 -6.06266618141193 Q9P227 ARHGAP23 Q9P227.S598.p_ARHGAP23 Q9P227_S598s _1_1_598_598 Q9P227 Q9P227|Q9P227-2 Rho GTPase-activating protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7308.7308.3 9.25 8.3 3.601 4 1 1 0 588.28 1682.8572 S598s TMT10 596 (R) HYsQDCSSIK (A) HY(0.0)S(0.99)QDCS(0.0)S(0.0)IK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARHGAP23 163444.2 1 39 148.2 512.52 HUMAN 1 -28.846 -28.7883 FTLPDGDSASRSFNT-p Q96S38;S640-p FTLPDGDSASRSFNT 0.757201638201782 0.206239833834715 0.0443333333333333 0.166 2.31226744505035 9.02010291528324 0.0443333333333333 0.166 0.58718270526695 0.125311147945684 0.576896802561461 1.81118979234071 Q96S38 RPS6KC1 Q96S38.S640.p_RPS6KC1 Q96S38_S640s _1_1_640_640 Q96S38 Q96S38|Q96S38-2|F6RJM5|F5H7T0 Ribosomal protein S6 kinase delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26317.26317.3 12.96 12.96 1.159 4 1 1 0 834.7602 2422.3018 S640s TMT10 626 (K) SEPLKPFFTLPDGDsASR (S) S(0.0)EPLKPFFT(0.0)LPDGDS(0.99)AS(0.0)R K:TMT10,s:Phosphorylated S RPS6KC1 119593.1 3 16 253.1 405.38 HUMAN 1 2.3123 9.0201 FTPAPSDSPSSQRIQ-p P19634;S785-p FTPAPSDSPSSQRIQ 0.181524191967561 0.13383639035726 0.376333333333333 -0.234 14.5938089934828 11.5128804809935 0.376333333333333 -0.234 0.0347231487381356 0.0705849240752996 2.80261117276328 -2.24515178554719 P19634 SLC9A1 P19634.S785.p_SLC9A1 P19634_S785s _1_1_785_785 P19634 P19634 Sodium/hydrogen exchanger 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12302.12302.4 24.05 24.05 1.286 10 1 1 0 780.3713 3038.4955 S785s TMT10 766 (R) SKETSSPGTDDVFTPAPSDsPSSQR (I) S(0.0)KET(0.0)S(0.0)S(0.0)PGT(0.0)DDVFT(0.0)PAPS(0.0)DS(0.99)PS(0.0)S(0.0)QR K:TMT10,s:Phosphorylated S SLC9A1 91274.8 9 8 732.1 235.73 HUMAN 1 14.5938 -11.5129 FTPGGGGSSVSMIAS-p P49321-3;S691-p FTPGGGGSSVSMIAS 0.16127524660131 0.138046624646755 0.26 0.153 15.8678574667295 11.3316077542234 0.26 0.153 0.0258949009011051 0.0735934604737996 3.04285844840636 2.21327671610306 P49321 NASP P49321.3.S691.p_NASP P49321-3_S691s _1_1_691_691 P49321-3 P49321|P49321-4|P49321-2|Q5T624|P49321-3 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23156.23182.3 24.13 24.13 1.147 10 1 1 0 918.1077 2672.3399 S691s TMT10 674 (K) ATLVESSTSGFTPGGGGsSVSMIASR (K) AT(0.0)LVES(0.0)S(0.0)T(0.0)S(0.0)GFT(0.0)PGGGGS(0.99)S(0.0)VS(0.0)MIAS(0.0)R s:Phosphorylated S NASP 86552 3 24 87.1 626.46 HUMAN 1 15.8679 11.3316 FTPPLKCSPKRKGKS-p Q3B726;S328-p FTPPLKCSPKRKGKS 0.468065510489932 0.085325098628597 0.0996666666666667 -0.233333333333333 6.08784163140881 14.1478990209591 0.0996666666666667 -0.233333333333333 0.246159066826268 0.0384777880369336 1.30019675732127 -2.71846194051275 Q3B726 TWISTNB Q3B726.S328.p_TWISTNB Q3B726_S328s _1_1_328_328 Q3B726 Q3B726 DNA-directed RNA polymerase I subunit RPA43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12888.12888.5 15.52 15.52 1.285 3 1 1 0 597.1253 2901.6314 S328s TMT10 314 (R) KHSEEAEFTPPLKCsPK (R) KHS(0.0)EEAEFT(0.0)PPLKCS(0.99)PK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TWISTNB 37945.1 6 9 540.1 277.01 HUMAN 1 6.0878 -14.1479 FTPSGILTPHALGSR-p Q9H0D6;T439-p FTPSGILTPHALGSR 0.401409043223139 0.978310404113495 0.139333333333333 -0.00299999999999998 7.31840660319788 0.135725959784031 0.139333333333333 -0.00299999999999999 0.185421179627999 0.969231240597855 1.51664151720138 -0.0403854334882673 Q9H0D6 XRN2 Q9H0D6.T439.p_XRN2 Q9H0D6_T439t _1_1_439_439 Q9H0D6 Q9H0D6|Q9H0D6-2 5'-3' exoribonuclease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22366.22366.3 18.75 18.75 1.939 4 1 1 0 758.7216 2194.1818 T439t TMT10 428 (R) DQPAFTPSGILtPHALGSR (N) DQPAFT(0.0)PS(0.0)GILT(0.99)PHALGS(0.0)R t:Phosphorylated T XRN2 109493.4 3 1 608.1 262.16 HUMAN 1 7.3184 -0.1357 FTRRYYRSPSRYRSR-p Q9BUV0;S107-p FTRRYYRSPSRYRSR 0.475925394225576 0.355497410476298 -0.100333333333333 0.097 5.93875005601702 5.9571110798461 -0.100333333333333 0.097 0.254756336189989 0.253681555513633 -1.27364472126259 1.27661783078275 Q9BUV0 RSRP1 Q9BUV0.S107.p_RSRP1 Q9BUV0_S107s _1_1_107_107 Q9BUV0 Q9BUV0|Q9BUV0-2|Q9BUV0-3|H3BTJ0 Arginine/serine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3985.3985.3 8.93 8.93 3.412 4 1 1 0 413.2021 1157.6265 S107s TMT10 104 (R) YYRsPSR (Y) Y(0.0)Y(0.0)RS(0.99)PS(0.0)R s:Phosphorylated S RSRP1 33669.8 1 2 2709.1 73.23 HUMAN 1 -5.9388 5.9571 FTRTVISSGGEERLA-p Q03164-3;S2694-p FTRTVISSGGEERLA 0.803042159535173 0.00765716937935308 -0.058 -0.922333333333333 1.83463256617385 30.2091029941824 -0.058 -0.922333333333334 0.65544573732034 0.000952992977938245 -0.471860609704209 -6.48562217128546 Q03164 KMT2A Q03164.3.S2694.p_KMT2A Q03164-3_S2694s _1_1_2694_2694 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7521.7521.2 8.69 5.08 1.156 3 1 1 0 672.3239 1263.6742 S2694s TMT10 2690 (R) TVISsGGEER (L) T(0.0)VIS(0.0)S(0.99)GGEER s:Phosphorylated S KMT2A 436608.3 1 30 26.1 936.8 HUMAN 1 -1.8346 -30.2091 FTSDGSPSPLGGIKR-p Q9H0D6;S487-p FTSDGSPSPLGGIKR 0.788927294767127 0.296102279910385 0.0403333333333333 0.100333333333333 1.98488253099089 6.97772948818965 0.0403333333333333 0.100333333333333 0.6331574872742 0.200552024867515 0.505451559920944 1.45671313925306 Q9H0D6 XRN2 Q9H0D6.S487.p_XRN2 Q9H0D6_S487s _1_1_487_487 Q9H0D6 Q9H0D6|Q9H0D6-2 5'-3' exoribonuclease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23237.23237.4 18.18 16.02 1.3 10 1 1 0 837.1572 3265.6411 S487s TMT10 466 (R) MQNNSSPSISPNTSFTSDGSPsPLGGIK (R) MQNNS(0.0)S(0.0)PS(0.0)IS(0.0)PNT(0.0)S(0.0)FT(0.0)S(0.0)DGS(0.0)PS(0.99)PLGGIK K:TMT10,s:Phosphorylated S XRN2 109493.4 6 6 608.1 262.16 HUMAN 1 1.9849 6.9777 FTSGAFLSPSVSVQE-p P52948;S1060-p FTSGAFLSPSVSVQE 0.278750676864012 0.139219549693382 0.169333333333333 0.168 10.4891524112606 11.2816614360099 0.169333333333333 0.168 0.0893479842282657 0.0744447123896236 2.06683610057826 2.20450612673552 P52948 NUP98 P52948.S1060.p_NUP98 P52948_S1060s _1_1_1060_1060 P52948 P52948|P52948-5|P52948-2|P52948-6 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23787.23787.3 19.43 19.43 3.635 5 1 1 0 727.6804 2101.0586 S1060s TMT10 1053 (K) FTSGAFLsPSVSVQECR (T) FT(0.0)S(0.0)GAFLS(0.99)PS(0.0)VS(0.0)VQECR C:Carbamidomethylation,s:Phosphorylated S NUP98 198716.8 5 20 187.1 472.84 HUMAN 1 10.4892 11.2817 FTSSPGLSTEDLKRE-p O14936-3;S55-p FTSSPGLSTEDLKRE 0.949355669265611 0.317644062495571 0.0113333333333333 0.0993333333333333 0.446574129900187 6.58294610025194 0.0113333333333333 0.0993333333333333 0.902282609723894 0.219636942792622 0.128647873269423 1.38743320480711 O14936 CASK O14936.3.S55.p_CASK O14936-3_S55s _1_1_55_55 O14936-3 O14936|O14936-2|O14936-6|O14936-4|O14936-3|Q5JS74 Isoform 3 of Peripheral plasma membrane protein CASK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17131.17131.3 8.15 8.15 1.215 5 1 1 0 692.6975 1996.1115 S55s TMT10 48 (K) FTSSPGLsTEDLKR (E) FT(0.0)S(0.0)S(0.0)PGLS(0.99)T(0.0)EDLKR K:TMT10,s:Phosphorylated S CASK 103024.6 1 3 1824.1 112.53 HUMAN 1 0.4466 6.5829 FTSTEPQYQPGENL_-p P12931-2;Y536-p FTSTEPQYQPGENL_ 0.392879936362468 0.0146738439913539 0.127666666666667 0.376333333333333 7.48227892346735 25.3905529549491 0.127666666666667 0.376333333333333 0.178555037656078 0.00289031185696775 1.54519707113953 5.13683442800879 P12931 SRC P12931.2.Y536.p_SRC P12931-2_Y536y _1_1_536_536 P12931-2 P12931-2 Isoform 2 of Proto-oncogene tyrosine-protein kinase Src HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37286.37286.5 30.69 23.94 3.083 7 1 1 0 907.6355 4454.1757 Y536y TMT10 510 (R) KEPEERPTFEYLQAFLEDYFTSTEPQyQPGENL (-) KEPEERPT(0.0)FEY(0.0)LQAFLEDY(0.0)FT(0.0)S(0.0)T(0.0)EPQY(0.99)QPGENL K:TMT10,y:Phosphorylated Y SRC 61101 2 14 1289.2 157.77 HUMAN 1 7.4823 25.3906 FTTQNQKSQDVELWE-p Q9UHB6-4;S727-p FTTQNQKSQDVELWE 0.116602871314905 0.00724308283752726 -0.523 0.572333333333333 19.4217248493735 30.617214556566 -0.523 0.572333333333333 0.0114242451793205 0.000867518099230241 -3.75593065482998 6.61136841415216 Q9UHB6 LIMA1 Q9UHB6.4.S727.p_LIMA1 Q9UHB6-4_S727s _1_1_727_727 Q9UHB6-4 Q9UHB6-4|Q9UHB6-5|Q9UHB6-2|F8VQE1|Q9UHB6-3|F8VS07 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25333.25333.3 13.61 13.61 99 1 1 1 0 686.0194 1976.0741 S727s TMT10 727 (K) sQDVELWEGEVVK (E) S(1.0)QDVELWEGEVVK K:TMT10,s:Phosphorylated S LIMA1 85678.4 1 32 42.1 822.82 HUMAN 1 -19.4217 30.6172 FTTRRSQSPINCIRP-p Q96E09;S189-p FTTRRSQSPINCIRP 0.182641671812691 0.00295784542795578 0.217333333333333 0.895333333333333 14.5257847308502 38.1077058326232 0.217333333333333 0.895333333333333 0.0352713048802721 0.000154607093824648 2.78997579583858 9.31196175280409 Q96E09 FAM122A Q96E09.S189.p_FAM122A Q96E09_S189s _1_1_189_189 Q96E09 Q96E09 Protein FAM122A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22115.22115.3 13.3 5.85 1.477 3 1 1 0 802.1126 2324.3524 S189s TMT10 187 (R) SQsPINCIRPSVLGPLK (R) S(0.0)QS(0.99)PINCIRPS(0.0)VLGPLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM122A 30813.8 10 8 509.1 287.77 HUMAN 1 14.5258 38.1077 FTTRSTFSTNYRSLG-p P05783;S10-p FTTRSTFSTNYRSLG 0.367523416772894 0.928272147217138 0.147333333333333 -0.013 8.06904728165722 0.45518104241517 0.147333333333333 -0.013 0.155989466173582 0.900496223381393 1.64713639578594 -0.131003370806611 P05783 KRT18 P05783.S10.p_KRT18 P05783_S10s _1_1_10_10 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8571.9221.2 11.36 5.9 1.151 5 1 1 0 642.7974 1204.616 S10s TMT10 7 (R) STFsTNYR (S) S(0.0)T(0.0)FS(0.99)T(0.0)NY(0.0)R s:Phosphorylated S KRT18 48057 1 4 89.1 623.62 HUMAN 1 8.069 -0.4552 FTTSKIGSLIDVNQS-p Q96A72;S108-p FTTSKIGSLIDVNQS 0.428733505282635 0.00679864713825252 -0.224666666666667 0.570333333333333 6.77414777032205 31.110383988942 -0.224666666666667 0.570333333333333 0.21017701655316 0.000774393325456621 -1.42141812841888 6.76595399153942 Q96A72 MAGOHB Q96A72.S108.p_MAGOHB Q96A72_S108s _1_1_108_108 Q96A72 Q96A72|P61326|P61326-2|F5H6P7 Protein mago nashi homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23212.23212.4 17.62 17.62 10.655 2 1 1 0 595.5728 2299.3022 S108s TMT10 106 (K) IGsLIDVNQSKDPEGLR (V) IGS(0.99)LIDVNQS(0.0)KDPEGLR K:TMT10,s:Phosphorylated S MAGOHB 17332.5 8 1 4408.1 31.9 HUMAN 1 -6.7741 31.1104 FTTSKLQSFEDLASI-p P40692;S87-p FTTSKLQSFEDLASI 0.389737992008685 0.315331945510278 -0.137333333333333 0.251333333333333 7.57071475165781 6.62226066078023 -0.137333333333333 0.251333333333333 0.17495587266633 0.217657649017165 -1.56058942221221 1.39435143130696 P40692 MLH1 P40692.S87.p_MLH1 P40692_S87s _1_1_87_87 P40692 P40692 DNA mismatch repair protein Mlh1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.35037.35037.3 9.79 9.79 9.792 5 1 1 0 715.0154 2063.0647 S87s TMT10 85 (K) LQsFEDLASISTYGFR (G) LQS(0.99)FEDLAS(0.0)IS(0.0)T(0.0)Y(0.0)GFR s:Phosphorylated S MLH1 85227 1 1 2162.1 94.86 HUMAN 1 -7.5707 6.6223 FTVDQTQTPSLKVKV-p E3W994;T766-p FTVDQTQTPSLKVKV 0.958739785397171 0.262844339845639 -0.00766666666666666 -0.127 0.355321820520915 7.6452927622455 -0.00766666666666666 -0.127 0.921441605618964 0.171977140582344 -0.103304934639855 -1.57308535709314 E3W994 NotFound E3W994.T766.p_NotFound E3W994_T766t _1_1_766_766 E3W994 A0A0U1RQI6|O75122|J3KR49|E3W994 CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18971.18971.3 11.89 11.89 1.181 4 1 1 0 635.005 1823.0315 T766t TMT10 759 (R) FTVDQTQtPSLK (V) FT(0.0)VDQT(0.0)QT(0.99)PS(0.0)LK K:TMT10,t:Phosphorylated T CLASP2 139660.6 1 19 158.1 498.15 HUMAN 1 -0.3553 -7.6453 FTVLSTKSLFLGQKL-p O75367;S190-p FTVLSTKSLFLGQKL 0.833574071653314 0.0137936499341328 -0.035 0.523 1.52447920687871 25.8306784152844 -0.035 0.523 0.703966640476353 0.00261175333821294 -0.400714942076883 5.25044682891297 O75367 H2AFY O75367.S190.p_H2AFY O75367_S190s _1_1_190_190 O75367 O75367|O75367-3|O75367-2 Core histone macro-H2A.1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21007.21007.2 11.54 2.85 99 1 1 1 0 665.8805 1250.7873 S190s TMT10 190 (K) sLFLGQK (L) S(1.0)LFLGQK K:TMT10,s:Phosphorylated S H2AFY 39787.5 1 5 1399.1 146.47 HUMAN 1 -1.5245 25.8307 FTVSSGESPPLSAGN-p Q562E7;S1272-p FTVSSGESPPLSAGN 0.527109208571049 0.0320849526179946 0.0913333333333333 0.319666666666667 5.14720011898679 20.1616340582439 0.0913333333333333 0.319666666666667 0.30568912449462 0.00963466445564151 1.13096613583115 3.91002838074167 Q562E7 WDR81 Q562E7.S1272.p_WDR81 Q562E7_S1272s _1_1_1272_1272 Q562E7 Q562E7|A0A0J9YXM6|Q562E7-4|Q562E7-3|Q562E7-5|Q562E7-6 WD repeat-containing protein 81 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22044.22044.3 15.66 15.66 2.381 6 1 1 0 926.1408 2696.4296 S1272s TMT10 1263 (R) QQFTVSSGEsPPLSAGNIYQK (R) QQFT(0.0)VS(0.0)S(0.0)GES(0.99)PPLS(0.0)AGNIY(0.0)QK K:TMT10,s:Phosphorylated S WDR81 213518.6 3 3 3422.1 51.55 HUMAN 1 5.1472 20.1616 FTYFSSLSPMARKIM-p Q9H425;S37-p FTYFSSLSPMARKIM 0.668143294057803 0.00352917669002825 -0.0823333333333333 -0.718 3.27571280810505 36.6226406917619 -0.0823333333333334 -0.718 0.470358199436997 0.000217638603637935 -0.775877319430867 -8.71119943703223 Q9H425 C1orf198 Q9H425.S37.p_C1orf198 Q9H425_S37s _1_1_37_37 Q9H425 Q9H425 Uncharacterized protein C1orf198 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27151.27151.2 12.2 12.2 1.198 5 1 1 0 858.4 1635.8402 S37s TMT10 30 (R) FTYFSSLsPMAR (K) FT(0.0)Y(0.0)FS(0.0)S(0.0)LS(0.99)PMAR s:Phosphorylated S C1orf198 36459.9 2 1 1196.1 167.35 HUMAN 1 -3.2757 -36.6226 FVADRAGTFKMVFTP-p P48735;T191-p FVADRAGTFKMVFTP 0.676283333592878 0.156723992986716 -0.0623333333333333 0.266333333333333 3.18275084439947 10.5843059580866 -0.0623333333333333 0.266333333333333 0.48053487867976 0.0874116673189885 -0.757292802094889 2.08253466174199 P48735 IDH2 P48735.T191.p_IDH2 P48735_T191t _1_1_191_191 P48735 P48735 Isocitrate dehydrogenase [NADP], mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16080.16080.3 10.65 10.65 10.649 2 1 1 0 646.3364 1857.0271 T191t TMT10 181 (K) ATDFVADRAGtFK (M) AT(0.0)DFVADRAGT(0.99)FK K:TMT10,t:Phosphorylated T IDH2 51364.8 1 3 2889.1 66.75 HUMAN 1 -3.1828 10.5843 FVCNVCESPFLSIKD-p Q13029;S1141-p FVCNVCESPFLSIKD 0.15127853533293 0.0583147404245154 0.325333333333333 0.516 16.5188667751418 16.4438563069835 0.325333333333333 0.516 0.0222901670112311 0.0226785022564265 3.16846302588257 3.15158218456865 Q13029 PRDM2 Q13029.S1141.p_PRDM2 Q13029_S1141s _1_1_1141_1141 Q13029 Q13029|Q13029-2|Q13029-3|Q13029-5 PR domain zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28290.28290.3 13.75 13.75 4.583 2 1 1 0 784.7218 2272.187 S1141s TMT10 1133 (K) NFVCNVCEsPFLSIK (D) NFVCNVCES(0.99)PFLS(0.0)IK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRDM2 191251.2 1 6 1106.1 176.67 HUMAN 1 16.5189 16.4439 FVDYKRRSGHFDVTT-p Q8TDM6;S1795-p FVDYKRRSGHFDVTT 0.640615783875993 0.843126306416546 -0.0643333333333333 -0.0206666666666666 3.61261718284638 1.04126283123841 -0.0643333333333334 -0.0206666666666667 0.435249500830436 0.786816967648796 -0.842316753846115 -0.284168839233416 Q8TDM6 DLG5 Q8TDM6.S1795.p_DLG5 Q8TDM6_S1795s _1_1_1795_1795 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2|Q8TDM6-5 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23141.23141.3 23.63 23.63 9.561 5 1 1 0 834.1088 2420.3437 S1795s Hydrogen 1795 (R) sGHFDVTTVASIKEITEK (N) S(0.99)GHFDVT(0.0)T(0.0)VAS(0.0)IKEIT(0.0)EK K:TMT10-Lys-Only,s:Phosphorylated S DLG5 215575.4 29 41 34.1 890.58 HUMAN 1 -3.6126 -1.0413 FVENKAFSMDEPVAA-p A0A0C4DFY5;S389-p FVENKAFSMDEPVAA 0.393058430842632 0.871217756127229 -0.276666666666667 0.0186666666666667 7.47951107816164 0.843344783987143 -0.276666666666667 0.0186666666666667 0.178668870611057 0.823503637060125 -1.5447151299354 0.234085334180053 A0A0C4DFY5 GPRC5C A0A0C4DFY5.S389.p_GPRC5C A0A0C4DFY5_S389s _1_1_389_389 A0A0C4DFY5 A0A0C4DFY5|Q9NQ84-2|J9JIE0 G-protein-coupled receptor family C group 5 member C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19967.19967.2 13.98 9.91 99 1 1 1 0 852.4282 1623.8817 S389s TMT10 387 (K) AFsMDEPVAAK (R) AFS(1.0)MDEPVAAK K:TMT10,s:Phosphorylated S GPRC5C 53504 3 3 1470.1 139.57 HUMAN 1 -7.4795 0.8433 FVEYEKDTPKKKRIK-p Q9UBU7;T345-p FVEYEKDTPKKKRIK 0.732545080573768 0.00137406073843988 0.0466666666666667 -1.08433333333333 2.56313905712757 46.4679522781005 0.0466666666666667 -1.08433333333333 0.554224977321582 2.25530234871352e-05 0.630192994259728 -13.4615174565155 Q9UBU7 DBF4 Q9UBU7.T345.p_DBF4 Q9UBU7_T345t _1_1_345_345 Q9UBU7 Q9UBU7 Protein DBF4 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29992.29992.4 16.32 16.32 3.98 2 1 1 0 625.0865 2417.3571 T345t TMT10 334 (K) LVFDFVEYEKDtPK (K) LVFDFVEY(0.0)EKDT(0.99)PK K:TMT10,t:Phosphorylated T DBF4 77598.3 4 1 880.1 207.32 HUMAN 1 2.5631 -46.468 FVFTRRGSMFYDEDG-p O75896;S50-p FVFTRRGSMFYDEDG 0.998180995519267 0.16109323138051 -0.000333333333333348 -0.144666666666667 0.0146773396790305 10.4274596216305 -0.00033333333333335 -0.144666666666667 0.996626122005544 0.0906262558492546 -0.00442736802455438 -2.05521116102068 O75896 TUSC2 O75896.S50.p_TUSC2 O75896_S50s_1_1_50_50 O75896 O75896 Tumor suppressor candidate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24742.24742.5 28.46 28.46 7.324 5 1 1 0 810.3938 3966.9787 S50s N72n TMT10 48 (R) RGsMFYDEDGDLAHEFYEETIVTKnGQK (R) RGS(0.99)MFY(0.0)DEDGDLAHEFY(0.0)EET(0.0)IVT(0.0)KN(1.0)GQK K:TMT10,s:Phosphorylated S,n:Deamidated TUSC2 12073.6 33 1 3304.1 54.39 HUMAN 1 -0.0147 -10.4275 FVISGVLSPDTISSK-p Q03188;S773-p FVISGVLSPDTISSK 0.513391553452534 0.00278908336687029 -0.0986666666666667 -0.970666666666667 5.34922291109086 38.6444303908352 -0.0986666666666667 -0.970666666666667 0.291794907981365 0.00013663342687306 -1.16768741125092 -9.53805068388077 Q03188 CENPC Q03188.S773.p_CENPC Q03188_S773s _1_1_773_773 Q03188 Q03188 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27201.27201.3 18.11 13.69 2.328 7 1 1 0 1040.2142 3038.6563 S773s TMT10 756 (R) IDYQGRPSGGFVISGVLsPDTISSK (R) IDY(0.0)QGRPS(0.0)GGFVIS(0.0)GVLS(0.99)PDT(0.0)IS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CENPC 107459.5 6 22 209.1 442.77 HUMAN 1 -5.3492 -38.6444 FVKNTCPSRPRERQT-p Q8NE18;S625-p FVKNTCPSRPRERQT 0.548004512561689 0.865842304013024 -0.115 0.0346666666666667 4.82047777933866 0.881136603047336 -0.115 0.0346666666666667 0.329573452898389 0.816368689488496 -1.07105466578214 0.243767512039641 Q8NE18 NotFound Q8NE18.S625.p_NotFound Q8NE18_S625s_1_1_625_625 Q8NE18 Q8NE18 Putative methyltransferase NSUN7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15578.15578.3 7.07 7.07 7.069 2 1 1 0 758.0571 2191.2007 N621n S625s Hydrogen 609 (K) LAPHPAVPAFVKnTCPsR (P) LAPHPAVPAFVKN(1.0)T(0.0)CPS(0.99)R K:TMT10-Lys-Only,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S NSUN7 81836.7 1 1 7269.1 7.07 HUMAN 1 -4.8205 0.8811 FVLAPEGSVANKFYV-p Q13283;S119-p FVLAPEGSVANKFYV 0.80894448179027 0.0312577512810312 0.0346666666666667 -0.292666666666667 1.76886497097745 20.3323698048888 0.0346666666666667 -0.292666666666667 0.665447048123829 0.0092632422020152 0.45698452308001 -3.94687451953283 Q13283 G3BP1 Q13283.S119.p_G3BP1 Q13283_S119s _1_1_119_119 Q13283 Q13283 Ras GTPase-activating protein-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30343.30343.3 15.88 15.88 9.726 2 1 1 0 759.7297 2197.2091 S119s TMT10 108 (R) FMQTFVLAPEGsVANK (F) FMQT(0.0)FVLAPEGS(0.99)VANK K:TMT10,s:Phosphorylated S G3BP1 52220.4 1 3 1003.1 189.39 HUMAN 1 1.7689 -20.3324 FVLERRDSFLGGGPG-p A1A5D9;S36-p FVLERRDSFLGGGPG 0.308133105029726 0.0691885159911197 -0.179 0.237333333333333 9.55588081011559 15.4239874169819 -0.179 0.237333333333333 0.11076738907922 0.028681460226707 -1.90464398419785 2.95635868181775 A1A5D9 CCDC64B A1A5D9.S36.p_CCDC64B A1A5D9_S36s _1_1_36_36 A1A5D9 A1A5D9 BICD family-like cargo adapter 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25941.25941.5 19.17 19.17 99 1 1 1 0 624.7221 3039.6151 S36s TMT10 34 (R) RDsFLGGGPGPEEPEDLALQLQQK (E) RDS(1.0)FLGGGPGPEEPEDLALQLQQK K:TMT10,s:Phosphorylated S BICDL2 56890 5 2 1427.1 143.65 HUMAN 1 -9.5559 15.424 FVLLDQVTMEDFMRN-p F8WAS7;T21-p FVLLDQVTMEDFMRN 0.392306727378366 0.0373113671420933 -0.158333333333333 0.338666666666667 7.49537411054991 19.1921814668284 -0.158333333333333 0.338666666666667 0.178017455420739 0.0120443080124622 -1.54747706019014 3.70439940875973 F8WAS7 NotFound F8WAS7.T21.p_NotFound F8WAS7_T21t _1_1_21_21 F8WAS7 F8WAS7 Unconventional myosin-Ig HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28308.28346.5 7.9 3.93 7.896 2 1 1 0 930.835 4570.1856 T21t Acetyl 2 (M) EDEEGPEYGKPDFVLLDQVtMEDFMRNLQLRGEWGR (E) EDEEGPEY(0.0)GKPDFVLLDQVT(0.99)MEDFMRNLQLRGEWGR K:TMT10,t:Phosphorylated T MYO1G 5047.5 1 1 7070.1 7.9 HUMAN 1 -7.4954 19.1922 FVLLPEQSPVSYSKR-p Q96K76;S832-p FVLLPEQSPVSYSKR 0.784516233372349 0.0910630018690853 -0.0513333333333333 0.216 2.02999864343371 13.7639228348363 -0.0513333333333333 0.216 0.626614060402057 0.0420346771864553 -0.515435252828141 2.64811956291375 Q96K76 USP47 Q96K76.S832.p_USP47 Q96K76_S832s _1_1_832_832 Q96K76 Q96K76|Q96K76-4|Q96K76-2 Ubiquitin carboxyl-terminal hydrolase 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34000.34000.2 16.19 16.19 2.636 4 1 1 0 1123.1155 2165.2622 S832s TMT10 824 (R) LFVLLPEQsPVSYSK (R) LFVLLPEQS(0.99)PVS(0.0)Y(0.0)S(0.0)K K:TMT10,s:Phosphorylated S USP47 158677.8 8 2 770.1 227.83 HUMAN 1 -2.03 13.7639 FVLTPELSPGKLQVL-p Q96DY7;S639-p FVLTPELSPGKLQVL 0.259171377612748 0.0010340752520887 -0.182333333333333 -1.405 11.144789673313 51.2563430459404 -0.182333333333333 -1.405 0.0768282662330732 7.48799758056657e-06 -2.18149488762204 -16.5680850900632 Q96DY7 MTBP Q96DY7.S639.p_MTBP Q96DY7_S639s _1_1_639_639 Q96DY7 Q96DY7 Mdm2-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.35749.35749.4 14.93 14.93 3.922 3 1 1 0 753.4351 2930.7574 S639s TMT10 631 (K) TFVLTPELsPGKLQVLPFEK (A) T(0.0)FVLT(0.0)PELS(0.99)PGKLQVLPFEK K:TMT10,s:Phosphorylated S MTBP 103389.4 6 3 2629.1 76.23 HUMAN 1 -11.1448 -51.2563 FVPAENDSILMNPAQ-p Q12888-2;S571-p FVPAENDSILMNPAQ 0.998250411735214 0.875224458296761 0.000333333333333324 0.0193333333333334 0.0110651673738918 0.815394119809757 0.000333333333333314 0.0193333333333334 0.997455394067642 0.828820697846052 0.00333915101752073 0.226886795692237 Q12888 TP53BP1 Q12888.2.S571.p_TP53BP1 Q12888-2_S571s _1_1_571_571 Q12888-2 Q12888-2 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27775.27775.4 9.71 9.71 3.74 2 1 1 0 878.9208 3432.6993 S571s TMT10 564 (K) FVPAENDsILMNPAQDGEVQLSQNDDK (T) FVPAENDS(0.99)ILMNPAQDGEVQLS(0.0)QNDDK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 1 26 3.1 2297.07 HUMAN 1 0.0111 0.8154 FVPGRRASLSDLTDL-p Q8WZ73;S240-p FVPGRRASLSDLTDL 0.458936571702861 0.296622788066258 0.098 0.110666666666667 6.23961556817324 6.96823434331271 0.098 0.110666666666667 0.237705069074784 0.200990979037614 1.32713898537367 1.45505148036333 Q8WZ73 RFFL Q8WZ73.S240.p_RFFL Q8WZ73_S240s _1_1_240_240 Q8WZ73 Q8WZ73|Q8WZ73-2|Q8WZ73-3|K7EN88 E3 ubiquitin-protein ligase rififylin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28305.28305.2 13.34 13.34 1.128 4 1 1 0 1092.0319 2103.0928 S240s Hydrogen 238 (R) RAsLSDLTDLEDIEGLTVR (Q) RAS(0.99)LS(0.0)DLT(0.0)DLEDIEGLT(0.0)VR s:Phosphorylated S RFFL 41768.5 8 3 2231.1 92.49 HUMAN 1 6.2396 6.9682 FVQKSMGSQEDDSGN-p Q9UNS2;S410-p FVQKSMGSQEDDSGN 0.767303528557655 0.20045199560663 0.0493333333333333 0.222 2.20320039030018 9.18557020215696 0.0493333333333333 0.222 0.602115713180643 0.120626570247279 0.553346364920369 1.83981402154418 Q9UNS2 COPS3 Q9UNS2.S410.p_COPS3 Q9UNS2_S410s _1_1_410_410 Q9UNS2 Q9UNS2|Q9UNS2-2|H7C3P9 COP9 signalosome complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9606.9606.2 10.45 10.45 1.152 7 1 1 0 1157.5013 2234.0283 S410s TMT10 407 (K) SMGsQEDDSGNKPSSYS (-) S(0.0)MGS(0.99)QEDDS(0.0)GNKPS(0.0)S(0.0)Y(0.0)S(0.0) K:TMT10,s:Phosphorylated S COPS3 48442.8 3 2 4666.1 28.21 HUMAN 1 2.2032 9.1856 FVQLKNNSDKDQSLG-p Q03252;S492-p FVQLKNNSDKDQSLG 0.867635849079879 0.331858611480094 0.0296666666666667 -0.155 1.2013486685765 6.34731909539866 0.0296666666666667 -0.155 0.758342041089871 0.231882562185309 0.32364900450903 -1.34587035640969 Q03252 LMNB2 Q03252.S492.p_LMNB2 Q03252_S492s _1_1_492_492 Q03252 Q03252 Lamin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11241.11241.3 9.34 9.34 9.339 2 1 1 0 691.3353 1992.0299 S492s TMT10 490 (K) NNsDKDQSLGNWR (I) NNS(0.99)DKDQS(0.0)LGNWR K:TMT10,s:Phosphorylated S LMNB2 70061.3 1 31 440.2 312.01 HUMAN 1 1.2013 -6.3473 FVQRFRRSVTLESKK-p P82933;S247-p FVQRFRRSVTLESKK 0.846433011840155 0.513602147091444 0.0306666666666667 -0.0896666666666667 1.40047490860551 3.88280400241383 0.0306666666666667 -0.0896666666666667 0.724356746067936 0.408996507744591 0.371521482342265 -0.894511887718702 P82933 MRPS9 P82933.S247.p_MRPS9 P82933_S247s _1_1_247_247 P82933 P82933 28S ribosomal protein S9, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8437.8437.2 10.93 10.93 10.934 3 1 1 0 715.4075 1349.8404 S247s Hydrogen 247 (R) sVTLESKK (Q) S(0.99)VT(0.0)LES(0.0)KK K:TMT10-Lys-Only,s:Phosphorylated S MRPS9 46062.2 4 1 5223.1 21.6 HUMAN 1 1.4005 -3.8828 FVRLGSLSERLRQHA-p O60664;S243-p FVRLGSLSERLRQHA 0.0784735709064937 0.0128335630021394 -0.652666666666667 -0.585 23.5766723116156 26.3503132275842 -0.652666666666667 -0.585 0.00438866841287981 0.00231722751780756 -4.69209085769664 -5.38690004615548 O60664 PLIN3 O60664.S243.p_PLIN3 O60664_S243s _1_1_243_243 O60664 O60664|O60664-3|O60664-4|O60664-2 Perilipin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14296.14296.3 7.49 7.49 7.486 2 1 1 0 447.2483 1259.7633 S243s TMT10 239 (R) LGSLsERLR (Q) LGS(0.0)LS(0.99)ERLR s:Phosphorylated S PLIN3 47245.3 2 9 1075.1 180.54 HUMAN 1 -23.5767 -26.3503 FVRLRNKSNEDQSMG-p P02545;S458-p FVRLRNKSNEDQSMG 0.0635370415880919 0.0126154655250237 -0.597666666666667 0.467666666666667 25.9684900367993 26.4828718847185 -0.597666666666667 0.467666666666667 0.00253017754040963 0.00224756785187176 -5.29332212374635 5.42211863929908 P02545 LMNA P02545.S458.p_LMNA P02545_S458s _1_1_458_458 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15029.15029.2 15.8 11.78 3.696 2 1 1 0 1159.0565 2237.1385 S458s Hydrogen 456 (R) NKsNEDQSMGNWQIK (R) NKS(0.99)NEDQS(0.0)MGNWQIK K:TMT10-Lys-Only,s:Phosphorylated S LMNA 74423.5 32 27 60.1 706.83 HUMAN 1 -25.9685 26.4829 FVSSDESSSGENKSK-p Q08945;S672-p FVSSDESSSGENKSK 0.278970775596523 0.347311705624676 0.162333333333333 0.136333333333333 10.4811927970542 6.0880162864583 0.162333333333333 0.136333333333333 0.089511888588722 0.246149167538733 2.06544838021682 1.29991430947434 Q08945 SSRP1 Q08945.S672.p_SSRP1 Q08945_S671sS672s_2_2_671_672 Q08945 Q08945 FACT complex subunit SSRP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12214.12214.3 8.68 8.68 1.198 6 2 2 0 855.3978 2404.2447 S671s S672s TMT10 662 (K) SKEFVSSDEssSGENK (S) S(0.0)KEFVS(0.0)S(0.0)DES(0.99)S(0.99)S(0.0)GENK K:TMT10,s:Phosphorylated S SSRP1 81415.7 6 10 1270.1 159.97 HUMAN 1 10.4812 6.088 FVVTRVESPPERAEP-p O75864;S576-p FVVTRVESPPERAEP 0.660585362937783 0.00539147169776956 -0.059 -0.521 3.36976352840525 32.9185610994586 -0.059 -0.521 0.460281635048545 0.000510674168052084 -0.794564886942578 -7.35846944379778 O75864 PPP1R37 O75864.S576.p_PPP1R37 O75864_S576s _1_1_576_576 O75864 O75864|O75864-2 Protein phosphatase 1 regulatory subunit 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17231.17231.3 12.08 12.08 2.884 2 1 1 0 608.6611 1743.9955 S576s TMT10 568 (K) VFVVTRVEsPPER (A) VFVVT(0.0)RVES(0.99)PPER s:Phosphorylated S PPP1R37 75450.7 1 4 1340.1 151.86 HUMAN 1 -3.3698 -32.9186 FVYRRSASPYHGFTI-p Q9NPI6;S62-p FVYRRSASPYHGFTI 0.139286671509888 0.855039783365238 0.343666666666667 0.0326666666666667 17.5249037499614 0.958918129190729 0.343666666666667 0.0326666666666668 0.0176811140287528 0.801877794254261 3.36674505091328 0.263515674380483 Q9NPI6 DCP1A Q9NPI6.S62.p_DCP1A Q9NPI6_S62s _1_1_62_62 Q9NPI6 Q9NPI6|Q9NPI6-2|A0A087WXD0 mRNA-decapping enzyme 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14508.14508.2 13.38 7.04 2.586 4 1 1 0 879.4323 1677.891 S62s TMT10 60 (R) SAsPYHGFTIVNR (L) S(0.0)AS(0.99)PY(0.0)HGFT(0.0)IVNR s:Phosphorylated S DCP1A 63479.5 4 1 344.1 352.95 HUMAN 1 17.5249 0.9589 FVYTRSASPKHGFTI-p Q8IZD4;S67-p FVYTRSASPKHGFTI 0.0552688318450056 0.377990095284022 0.894333333333333 -0.214333333333333 27.386694164593 5.61260788368383 0.894333333333334 -0.214333333333333 0.00182528457430457 0.274624457258665 5.67477616462322 -1.2149599561311 Q8IZD4 DCP1B Q8IZD4.S67.p_DCP1B Q8IZD4_S67s _1_1_67_67 Q8IZD4 Q8IZD4|B4DVJ6|F5H4R4 mRNA-decapping enzyme 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11408.11438.3 9.21 4.01 2.092 3 1 1 0 662.0128 1904.0577 S67s TMT10 65 (R) SAsPKHGFTIMNR (L) S(0.0)AS(0.99)PKHGFT(0.0)IMNR K:TMT10,s:Phosphorylated S DCP1B 68121.1 2 1 577.1 267.77 HUMAN 1 27.3867 -5.6126 FWHRKKISPNKKPFS-p O60318;S508-p FWHRKKISPNKKPFS 0.14599972063271 0.0508197960033686 0.483666666666667 0.351666666666667 17.0242171015124 17.2810315499178 0.483666666666667 0.351666666666667 0.0198416730853209 0.018702378628232 3.26740609193518 3.31561410906654 O60318 MCM3AP O60318.S508.p_MCM3AP O60318_S508s _1_1_508_508 O60318 O60318 Germinal-center associated nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7340.7340.4 7.28 7.28 99 1 1 1 0 453.5388 1731.1662 S508s TMT10 505 (R) KKIsPNK (K) KKIS(1.0)PNK K:TMT10,s:Phosphorylated S MCM3AP 220797 2 4 653.1 254.06 HUMAN 1 17.0242 17.281 FWIIEDMSPFGKRRK-p Q86V15;S1410-p FWIIEDMSPFGKRRK 0.875798989065343 0.0134380087243859 0.0293333333333333 -0.553333333333333 1.12957998029493 26.0296855546237 0.0293333333333333 -0.553333333333333 0.770978029142743 0.00249477535142892 0.306073643927881 -5.3024052367068 Q86V15 CASZ1 Q86V15.S1410.p_CASZ1 Q86V15_S1410s _1_1_1410_1410 Q86V15 Q86V15 Zinc finger protein castor homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30748.30748.3 17.56 13.74 99 1 1 1 0 722.0394 2084.1403 S1410s TMT10 1402 (K) RFWIIEDMsPFGK (R) RFWIIEDMS(1.0)PFGK K:TMT10,s:Phosphorylated S CASZ1 193374.5 4 10 530.1 281.17 HUMAN 1 1.1296 -26.0297 FWPKVPDSPATKYPI-p O60673;S1030-p FWPKVPDSPATKYPI 0.301769380581339 0.046191872087962 -0.264666666666667 -0.241666666666667 9.75683879310043 17.8701298236471 -0.264666666666667 -0.241666666666667 0.105758704120597 0.0163300313180298 -1.93949432318045 -3.43324445101381 O60673 REV3L O60673.S1030.p_REV3L O60673_S1030s _1_1_1030_1030 O60673 O60673|O60673-2 DNA polymerase zeta catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23886.23886.3 15.45 13.81 1.964 5 1 1 0 885.5013 2574.515 S1030s TMT10 1027 (K) VPDsPATKYPIYPLTPK (K) VPDS(0.99)PAT(0.0)KY(0.0)PIY(0.0)PLT(0.0)PK K:TMT10,s:Phosphorylated S REV3L 356192.6 1 4 524.1 282.7 HUMAN 1 -9.7568 -17.8701 FYCEIPRSFRHLSFY-p Q14644;S72-p FYCEIPRSFRHLSFY 0.166246459389339 0.00928729121254216 -0.251333333333333 -0.528333333333333 15.5871690772982 28.6964804826756 -0.251333333333333 -0.528333333333333 0.0276237790905949 0.00135005652359273 -2.98931779926929 -6.03609759291792 Q14644 RASA3 Q14644.S72.p_RASA3 Q14644_S72s _1_1_72_72 Q14644 Q14644|Q14644-2 Ras GTPase-activating protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28126.28126.3 9.91 9.91 3.052 4 1 1 0 918.0759 2672.2475 S72s TMT10 56 (K) SLCPFYGEDFYCEIPRsFR (H) S(0.0)LCPFY(0.0)GEDFY(0.0)CEIPRS(0.99)FR C:Carbamidomethylation,s:Phosphorylated S RASA3 96895.2 1 1 3298.1 54.53 HUMAN 1 -15.5872 -28.6965 FYIKSSPSPQKRYQD-p O14617-5;S688-p FYIKSSPSPQKRYQD 0.114050912851162 0.00143419657753005 -0.325333333333333 -1.056 19.6468408346745 45.8864326880489 -0.325333333333333 -1.056 0.0108471567607753 2.57843822669683e-05 -3.80356518563787 -13.1245705122544 O14617 AP3D1 O14617.5.S688.p_AP3D1 O14617-5_S686sS688s_2_2_686_688 O14617-5 O14617-5|O14617-2|O14617-4|O14617-3 Isoform 5 of AP-3 complex subunit delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16892.16892.3 8.5 8.5 1.133 4 2 2 0 1089.9033 3107.7659 S686s S688s TMT10 673 (R) KQEQANNPFYIKSsPsPQK (R) KQEQANNPFY(0.0)IKS(0.0)S(0.99)PS(0.99)PQK K:TMT10,s:Phosphorylated S AP3D1 137789.5 6 11 513.1 286.98 HUMAN 1 -19.6468 -45.8864 FYMYQHISPDLSRRF-p Q8N9U0;S137-p FYMYQHISPDLSRRF 0.171158122502722 0.482141278564595 0.353 0.156666666666667 15.279662947642 4.22941763092453 0.353 0.156666666666667 0.0296506149656715 0.377622825027495 2.93106862481379 0.960567122091287 Q8N9U0 TC2N Q8N9U0.S137.p_TC2N Q8N9U0_S137s _1_1_137_137 Q8N9U0 Q8N9U0|Q8N9U0-2 Tandem C2 domains nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24113.24113.4 25.34 16.76 1.903 11 1 1 0 1068.2673 4190.0694 S137s TMT10 111 (R) KVELSSSSQHGPSYDVYNPFYMYQHIsPDLSR (R) KVELS(0.0)S(0.0)S(0.0)S(0.0)QHGPS(0.0)Y(0.0)DVY(0.0)NPFY(0.0)MY(0.0)QHIS(0.99)PDLS(0.0)R K:TMT10,s:Phosphorylated S TC2N 55796.6 1 2 1080.1 179.95 HUMAN 1 15.2797 4.2294 FYPGDQQSVTFGTKS-p P54886;S294-p FYPGDQQSVTFGTKS 0.703545989174049 0.299940852818491 0.0573333333333333 0.108333333333333 2.87021837776487 6.9034172182864 0.0573333333333333 0.108333333333333 0.516390402785761 0.204013204813576 0.693926622026109 1.44370273378892 P54886 ALDH18A1 P54886.S294.p_ALDH18A1 P54886_S294s _1_1_294_294 P54886 P54886|P54886-2 Delta-1-pyrroline-5-carboxylate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35704.35704.3 17.55 17.55 2.719 4 1 1 0 856.4476 2487.3535 S294s TMT10 283 (K) LIDIFYPGDQQsVTFGTK (S) LIDIFY(0.0)PGDQQS(0.99)VT(0.0)FGT(0.0)K K:TMT10,s:Phosphorylated S ALDH18A1 88042.4 1 3 2259.1 91 HUMAN 1 2.8702 6.9034 FYPGTGRSPAAGSSQ-p Q14938;S301-p FYPGTGRSPAAGSSQ 0.334574952100545 0.0689517361438301 0.142 0.239 8.87580113399778 15.4452126701808 0.142 0.239 0.129544770693058 0.0285416274452989 1.78686361310921 2.96037323106504 Q14938 NFIX Q14938.S301.p_NFIX Q14938_S301s _1_1_301_301 Q14938 Q14938|Q14938-4|K7EN08|Q14938-3|Q14938-5|Q14938-6 Nuclear factor 1 X-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17562.17562.3 24.73 22.41 2.206 6 1 1 0 984.8235 2872.4841 S301s Hydrogen 301 (R) sPAAGSSQSSGWPNDVDAGPASLKK (S) S(0.99)PAAGS(0.0)S(0.0)QS(0.0)S(0.0)GWPNDVDAGPAS(0.0)LKK K:TMT10-Lys-Only,s:Phosphorylated S NFIX 55610.7 5 5 1219.1 165.13 HUMAN 1 8.8758 15.4452 FYRSSNASDKDSDLQ-p Q9UKA4;S288-p FYRSSNASDKDSDLQ 0.1560557092084 0.00748899231642798 -0.345333333333333 -0.507333333333333 16.2110841968752 30.3959294072572 -0.345333333333333 -0.507333333333333 0.0239271835033506 0.000912866057464628 -3.10882627476235 -6.54294468467668 Q9UKA4 AKAP11 Q9UKA4.S288.p_AKAP11 Q9UKA4_S288s _1_1_288_288 Q9UKA4 Q9UKA4 A-kinase anchor protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8198.8198.4 11.63 6.91 1.118 4 1 1 0 541.2794 2082.1282 S288s TMT10 284 (R) SSNAsDKDSDLQK (T) S(0.0)S(0.0)NAS(0.99)DKDS(0.0)DLQK K:TMT10,s:Phosphorylated S AKAP11 213075.9 2 3 688.1 243.29 HUMAN 1 -16.2111 -30.3959 FYSRGLNSLESTLTF-p Q8NCL8-2;S322-p FYSRGLNSLESTLTF 0.510800075050158 0.0202813566709252 0.179333333333333 0.388 5.39223646024399 23.1799247527652 0.179333333333333 0.388 0.288919166950599 0.00480847679696454 1.17547653334894 4.5918957780828 Q8NCL8 TMEM116 Q8NCL8.2.S322.p_TMEM116 Q8NCL8-2_S322s _1_1_322_322 Q8NCL8-2 Q8NCL8-2|Q8NCL8-3|G3V1Z3 Isoform 2 of Transmembrane protein 116 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37985.37985.3 10.5 10.5 2.665 8 1 1 0 765.7197 2215.1695 S322s TMT10 319 (R) GLNsLESTLTFPASTSTIF (-) GLNS(0.99)LES(0.0)T(0.0)LT(0.0)FPAS(0.0)T(0.0)S(0.0)T(0.0)IF s:Phosphorylated S TMEM116 38736.6 1 1 5930.1 15.2 HUMAN 1 5.3922 23.1799 FYSTKRPSYRAEQYP-p Q99569;S1178-p FYSTKRPSYRAEQYP 0.175566091093158 0.0822455842434245 -0.332 -0.276 15.0240779536863 14.3749939226295 -0.332 -0.276 0.0314479401749138 0.036517463826755 -2.88296823362178 -2.76032193555037 Q99569 PKP4 Q99569.S1178.p_PKP4 Q99569_S1178s _1_1_1178_1178 Q99569 Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16602.16602.3 8.45 8.45 8.454 5 1 1 0 768.6926 2224.0984 S1178s TMT10 1176 (K) RPsYRAEQYPGSPDSWV (-) RPS(0.99)Y(0.0)RAEQY(0.0)PGS(0.0)PDS(0.0)WV s:Phosphorylated S PKP4 132664.7 1 31 122.1 546.31 HUMAN 1 -15.0241 -14.375 FYTGQGRSPGSGSQS-p Q12857-2;S300-p FYTGQGRSPGSGSQS 0.295408715152096 0.0260966993887235 0.157333333333333 0.292 9.97043483730583 21.5295288778595 0.157333333333333 0.292 0.100683085487578 0.0070314859322296 1.97657442106626 4.21083520286977 Q12857 NFIA Q12857.2.S300.p_NFIA Q12857-2_S300s _1_1_300_300 Q12857-2 Q12857-4|B1AKN8|Q12857-3|Q12857-2|B1AKN5 Isoform 2 of Nuclear factor 1 A-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19240.19240.4 15.96 15.96 1.357 8 1 1 0 770.3712 2998.4981 S300s TMT10 300 (R) sPGSGSQSSGWHEVEPGMPSPTTLK (K) S(0.99)PGS(0.0)GS(0.0)QS(0.0)S(0.0)GWHEVEPGMPS(0.0)PT(0.0)T(0.0)LK K:TMT10,s:Phosphorylated S NFIA 55018.3 13 9 555.1 273.2 HUMAN 1 9.9704 21.5295 GAAAGGGTPSKGVNF-p P31323;T69-p GAAAGGGTPSKGVNF 0.754658716684806 0.00349217416434413 0.051 -0.656666666666667 2.33619785084615 36.7239547625473 0.051 -0.656666666666667 0.583956120816854 0.000212620200692308 0.582032170580047 -8.75105964788974 P31323 PRKAR2B P31323.T69.p_PRKAR2B P31323_T69t _1_1_69_69 P31323 P31323 cAMP-dependent protein kinase type II-beta regulatory subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19173.19173.3 19.05 19.05 4.651 3 1 1 0 662.0048 1904.0278 T69t TMT10 57 (R) TWGDLGAAAGGGtPSK (G) T(0.0)WGDLGAAAGGGT(0.99)PS(0.0)K K:TMT10,t:Phosphorylated T PRKAR2B 46700.6 1 1 3065.1 61.65 HUMAN 1 2.3362 -36.724 GAAALRRSINQPVAF-p Q9GZT3;S15-p GAAALRRSINQPVAF 0.740973161542071 0.405358506396751 0.053 -0.0846666666666666 2.47058962348625 5.21915599255901 0.053 -0.0846666666666666 0.566162418312362 0.300666055995226 0.610667605738408 -1.14383228400647 Q9GZT3 SLIRP Q9GZT3.S15.p_SLIRP Q9GZT3_S15s _1_1_15_15 Q9GZT3 G3V2S9|Q9GZT3|Q9GZT3-2|G3V4X6|A0A087WUN7 SRA stem-loop-interacting RNA-binding protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18455.18455.2 12.72 4.13 99 1 1 1 0 720.3856 1359.7946 S15s TMT10 15 (R) sINQPVAFVR (R) S(1.0)INQPVAFVR s:Phosphorylated S SLIRP 12405.8 1 1 2024.1 101.99 HUMAN 1 2.4706 -5.2192 GAAESPGTSGSPRTA-p Q7L311;T241-p GAAESPGTSGSPRTA 0.305569409878798 0.552604675454344 0.586666666666667 0.11 9.65342404112646 3.46885687432086 0.586666666666667 0.11 0.108307266700549 0.449898259016744 1.92155615722903 0.814009658628731 Q7L311 ARMCX2 Q7L311.T241.p_ARMCX2 Q7L311_T241t _1_1_241_241 Q7L311 Q7L311 Armadillo repeat-containing X-linked protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19858.19858.4 25.14 25.14 1.168 9 1 1 0 1016.998 3984.9988 T241t TMT10 205 (K) VAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPGtSGSPR (T) VAEAPGVAS(0.0)PT(0.0)EAAEAPVPAT(0.0)PT(0.0)GAAAPT(0.0)GAAES(0.0)PGT(0.99)S(0.0)GS(0.0)PR t:Phosphorylated T ARMCX2 65967.6 1 2 4913.1 25.14 HUMAN 1 9.6534 3.4689 GAAGGSSTPSPRPST-p A4D1S0;T141-p GAAGGSSTPSPRPST 0.0722495595033206 0.115578722929137 0.418666666666667 0.169 24.5265669961194 12.3618651864376 0.418666666666667 0.169 0.00352649522708868 0.0580515047247809 4.92486147041477 2.39545089596835 A4D1S0 KLRG2 A4D1S0.T141.p_KLRG2 A4D1S0_S139sS140sT141t_3_3_139_141 A4D1S0 A4D1S0|A4D1S0-2 Killer cell lectin-like receptor subfamily G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10280.10492.3 7.46 7.46 7.457 6 3 3 0 869.7542 2367.3509 S139s S140s T141t TMT10 130 (R) VKPVGAAGGsstPSPRPSTR (F) VKPVGAAGGS(0.99)S(0.99)T(0.99)PS(0.0)PRPS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S,t:Phosphorylated T KLRG2 43534.4 4 18 945.1 197.69 HUMAN 1 24.5266 12.3619 GAALACCSEDEEDDE-p Q147X3;S39-p GAALACCSEDEEDDE 0.427864342425449 0.448779663127798 0.132 0.101 6.78818067331104 4.63897081593953 0.132 0.101 0.209498989568919 0.343639373356057 1.42388200372267 1.03726472764557 Q147X3 NAA30 Q147X3.S39.p_NAA30 Q147X3_S39s _1_1_39_39 Q147X3 Q147X3 N-alpha-acetyltransferase 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16023.16023.3 36.26 36.26 15.916 2 1 1 0 1121.1028 3281.3255 S39s TMT10 27 (R) CPFPAGAALACCsEDEEDDEEHEGGGSR (S) CPFPAGAALACCS(0.99)EDEEDDEEHEGGGS(0.0)R C:Carbamidomethylation,s:Phosphorylated S NAA30 39889.4 6 1 1035.1 185.79 HUMAN 1 6.7882 4.639 GAAPGGASPASSSSA-p Q9BXK1;S99-p GAAPGGASPASSSSA 0.521573345412395 0.118221029117895 -0.0873333333333333 -0.168333333333333 5.22683749679086 12.2277868081794 -0.0873333333333333 -0.168333333333333 0.300134728433256 0.0598716627065391 -1.14546948528607 -2.37159412136026 Q9BXK1 KLF16 Q9BXK1.S99.p_KLF16 Q9BXK1_S99s _1_1_99_99 Q9BXK1 Q9BXK1 Krueppel-like factor 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8431.8431.4 24.69 24.69 3.397 10 1 1 0 887.1892 3465.7723 S99s TMT10 89 (R) GGPGAAPGGAsPASSSSAASSPSSGRAPGAAPSAAAK (S) GGPGAAPGGAS(0.99)PAS(0.0)S(0.0)S(0.0)S(0.0)AAS(0.0)S(0.0)PS(0.0)S(0.0)GRAPGAAPS(0.0)AAAK K:TMT10,s:Phosphorylated S KLF16 25886.6 4 2 2479.1 81.75 HUMAN 1 -5.2268 -12.2278 GAAPLPASPGARRPG-p Q9NUE0;S19-p GAAPLPASPGARRPG 0.330906590375012 0.0679360479299929 0.178 -0.229 8.97532765043436 15.5374662316291 0.178 -0.229 0.126609774404887 0.0279417354734746 1.80409184334775 -2.97784521374239 Q9NUE0 ZDHHC18 Q9NUE0.S19.p_ZDHHC18 Q9NUE0_S19s _1_1_19_19 Q9NUE0 Q9NUE0 Palmitoyltransferase ZDHHC18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16547.16547.3 22.37 19.39 2.368 3 1 1 0 994.8246 2902.4956 S19s TMT10 1 (-) MKDCEYQQISPGAAPLPAsPGAR (R) MKDCEY(0.0)QQIS(0.0)PGAAPLPAS(0.99)PGAR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZDHHC18 43057 7 1 2981.1 64.14 HUMAN 1 8.9753 -15.5375 GAAPYHKYPPMKVLM-p O95747;Y230-p GAAPYHKYPPMKVLM 0.0995508853370669 0.00775546074091269 0.395333333333333 0.536 21.1910872003911 30.1169675648328 0.395333333333333 0.536 0.00760135962855849 0.000973426675874679 4.13936212697719 6.45750216269371 O95747 OXSR1 O95747.Y230.p_OXSR1 O95747_Y230y _1_1_230_230 O95747 O95747|C9JIG9 Serine/threonine-protein kinase OSR1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.48403.48403.4 24.9 24.9 1.108 5 1 1 0 929.736 3635.9903 Y230y TMT10 208 (K) ADIWSFGITAIELATGAAPYHKyPPMK (V) ADIWS(0.0)FGIT(0.0)AIELAT(0.0)GAAPY(0.0)HKY(0.99)PPMK K:TMT10,y:Phosphorylated Y OXSR1 58306.4 2 1 125.1 24.9 HUMAN 1 21.1911 30.117 GAARAGVYNLTKSLA-p Q9BY49;Y179-p GAARAGVYNLTKSLA 0.567246377055338 0.809572918705456 -0.121666666666667 -0.0326666666666666 4.53620428606749 1.28579013157387 -0.121666666666667 -0.0326666666666666 0.351867837059346 0.743739738666734 -1.01833498438347 -0.344070177399654 Q9BY49 PECR Q9BY49.Y179.p_PECR Q9BY49_Y179y _1_1_179_179 Q9BY49 Q9BY49|Q9BY49-2 Peroxisomal trans-2-enoyl-CoA reductase GG20160819_MSz_CCLE_T4D7_pY_Injection_01.16235.16273.2 13.07 4.73 2.371 2 1 1 0 702.3887 1323.8037 Y179y TMT10 176 (R) AGVyNLTK (S) AGVY(0.99)NLT(0.0)K K:TMT10,y:Phosphorylated Y PECR 32829 1 1 269.1 13.07 HUMAN 1 -4.5362 -1.2858 GACDGNFSPTSKRIR-p Q96JK9;S186-p GACDGNFSPTSKRIR 0.259889123537714 0.0715513637789286 0.26 -0.246333333333333 11.1002614950116 15.2248850576697 0.26 -0.246333333333333 0.0776200379070111 0.030026968905356 2.17368366968361 -2.91879616963699 Q96JK9 MAML3 Q96JK9.S186.p_MAML3 Q96JK9_S170sS186s_2_2_170_186 Q96JK9 Q96JK9 Mastermind-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13766.13766.4 13.03 13.03 4.633 4 2 2 0 924.6939 3535.8167 S170s S186s TMT10 164 (R) KLEGARsPLNGDQQNGACDGNFsPTSK (R) KLEGARS(0.99)PLNGDQQNGACDGNFS(0.99)PT(0.0)S(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MAML3 122747.3 1 3 4494.1 30.73 HUMAN 1 11.1003 -15.2249 GADGPRASLVKKLFQ-p Q1W6H9;S121-p GADGPRASLVKKLFQ 0.873480049842057 0.0347677052789133 -0.0436666666666667 -0.396 1.14945839354046 19.6440019723929 -0.0436666666666667 -0.396 0.767457192593834 0.0108542495634985 -0.310959449521606 -3.79948763707985 Q1W6H9 FAM110C Q1W6H9.S121.p_FAM110C Q1W6H9_S121s _1_1_121_121 Q1W6H9 Q1W6H9 Protein FAM110C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9525.9525.3 11.34 8.78 3.871 2 1 1 0 584.9854 1672.9746 S121s TMT10 112 (R) GSGADGPRAsLVK (K) GS(0.0)GADGPRAS(0.99)LVK K:TMT10,s:Phosphorylated S FAM110C 34147.7 1 2 2986.1 64.03 HUMAN 1 -1.1495 -19.644 GADILRGSPSYTQAS-p Q9UHF7-2;S816-p GADILRGSPSYTQAS 0.893353478250719 0.768368504735141 0.0236666666666667 -0.0396666666666666 0.956145296706285 1.58226348380906 0.0236666666666667 -0.0396666666666666 0.80238993126006 0.694662174741613 0.262841469554189 -0.414121990500609 Q9UHF7 TRPS1 Q9UHF7.2.S816.p_TRPS1 Q9UHF7-2_S816s _1_1_816_816 Q9UHF7-2 Q9UHF7|E5RFF3|E5RJ97|Q9UHF7-2|Q9UHF7-3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26347.26347.3 25.34 25.34 1.189 9 1 1 0 996.8488 2908.5668 S816s TMT10 815 (R) GsPSYTQASLGLLTPVSGTQEQTK (T) GS(0.99)PS(0.0)Y(0.0)T(0.0)QAS(0.0)LGLLT(0.0)PVS(0.0)GT(0.0)QEQT(0.0)K K:TMT10,s:Phosphorylated S TRPS1 145246 14 25 14.1 1150.14 HUMAN 1 0.9561 -1.5823 GADKIQMTWTRDKYM-p Q9UP95;T983-p GADKIQMTWTRDKYM 0.159845829771225 0.200501267663209 -0.353666666666667 -0.147 15.9413764102769 9.18275449336506 -0.353666666666667 -0.147 0.025460232131127 0.120704802745412 -3.05694201592995 -1.83932687015136 Q9UP95 SLC12A4 Q9UP95.T983.p_SLC12A4 Q9UP95_T983t _1_1_983_983 Q9UP95 Q9UP95-7|Q9UP95-6|Q9UP95-2|Q9UP95-5|I3L4N6|Q9UP95-3 Solute carrier family 12 member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26309.26309.3 17.2 17.2 1.332 6 1 1 0 1137.8705 3331.6404 T983t TMT10 962 (R) LESLYSDEEDESAVGADKIQMtWTR (D) LES(0.0)LY(0.0)S(0.0)DEEDES(0.0)AVGADKIQMT(0.99)WT(0.0)R K:TMT10,t:Phosphorylated T SLC12A4 121788.8 6 25 1247.1 162.14 HUMAN 1 -15.9414 -9.1828 GADLLTGSESENKED-p A0A0U1RQQ9;S664-p GADLLTGSESENKED 0.210044301362565 0.970945799147971 0.21 -0.00399999999999997 13.0758509159764 0.181880711049454 0.21 -0.00399999999999996 0.0492509836126021 0.958985253284731 2.52474387852638 -0.0538472446510227 A0A0U1RQQ9 NotFound A0A0U1RQQ9.S664.p_NotFound A0A0U1RQQ9_S664s _1_1_664_664 A0A0U1RQQ9 A0A0U1RQQ9|Q6P3W7 SCY1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26312.26312.4 21.81 19.86 1.165 3 1 1 0 865.6963 3379.7948 S664s TMT10 652 (K) VFNNIGADLLTGsESENKEDGLQNK (H) VFNNIGADLLT(0.0)GS(0.99)ES(0.0)ENKEDGLQNK K:TMT10,s:Phosphorylated S SCYL2 104795 3 2 1113.1 175.8 HUMAN 1 13.0759 -0.1819 GADQKMSSPEDDSDT-p Q15424;S384-p GADQKMSSPEDDSDT 0.386906109244301 0.0120113368895733 -0.245 0.441666666666667 7.63273821221813 26.825733212222 -0.245 0.441666666666667 0.172475009991825 0.00207695304740843 -1.57137778949689 5.51399665112283 Q15424 SAFB Q15424.S384.p_SAFB Q15424_S384s _1_1_384_384 Q15424 Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8771.8771.2 8.88 8.88 1.166 4 1 1 0 875.3907 1669.7991 S384s TMT10 382 (K) MSsPEDDSDTK (R) MS(0.0)S(0.99)PEDDS(0.0)DT(0.0)K K:TMT10,s:Phosphorylated S SAFB 103096.3 1 28 83.1 629.62 HUMAN 1 -7.6327 26.8257 GAEAFGDSEEDGEDV-p Q99549-2;S51-p GAEAFGDSEEDGEDV 0.857836241357698 0.0127699177111281 0.0293333333333333 0.375333333333333 1.29844158942646 26.3906385190574 0.0293333333333333 0.375333333333333 0.741576298795884 0.0022958110829445 0.347150311452975 5.39759600586547 Q99549 MPHOSPH8 Q99549.2.S51.p_MPHOSPH8 Q99549-2_S51s _1_1_51_51 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24251.24251.2 21.77 21.77 99 1 1 1 0 1349.1025 2617.2194 S51s TMT10 44 (R) GAEAFGDsEEDGEDVFEVEK (I) GAEAFGDS(1.0)EEDGEDVFEVEK K:TMT10,s:Phosphorylated S MPHOSPH8 98148.4 6 2 242.1 413.34 HUMAN 1 1.2984 26.3906 GAEASAASEEEAGPQ-p P49006;S165-p GAEASAASEEEAGPQ 0.153159090763807 0.348112616355007 0.239333333333333 -0.0903333333333333 16.3863243159304 6.07393449967165 0.239333333333333 -0.0903333333333333 0.0229809283344297 0.246948589553766 3.14272449708084 -1.29741149532306 P49006 MARCKSL1 P49006.S165.p_MARCKSL1 P49006_S165s _1_1_165_165 P49006 P49006 MARCKS-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13651.13651.3 21.18 21.18 4.339 9 1 1 0 1312.2338 3854.7162 S165s TMT10 158 (K) GAEASAAsEEEAGPQATEPSTPSGPESGPTPASAEQNE (-) GAEAS(0.0)AAS(0.99)EEEAGPQAT(0.0)EPS(0.0)T(0.0)PS(0.0)GPES(0.0)GPT(0.0)PAS(0.0)AEQNE s:Phosphorylated S MARCKSL1 19585.5 3 13 402.1 327.42 HUMAN 1 16.3863 -6.0739 GAEASARSPRSYLVA-p P06401;S400-p GAEASARSPRSYLVA 0.94894200602254 0.00363879152855353 0.0103333333333333 0.623333333333333 0.450823798354628 36.227348361798 0.0103333333333333 0.623333333333334 0.901400137877936 0.000238377446785536 0.129817387824267 8.55720954091799 P06401 PGR P06401.S400.p_PGR P06401_S400s _1_1_400_400 P06401 P06401|P06401-5|Q8NG42|P06401-2|Q8NG44|Q8NG45|A0A087WXR4 Progesterone receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6950.7156.4 16.23 11.13 2.661 2 1 1 0 575.0445 2217.1875 S400s TMT10 387 (K) IKEEEEGAEASARsPR (S) IKEEEEGAEAS(0.0)ARS(0.99)PR K:TMT10,s:Phosphorylated S PGR 100348.6 8 11 260.1 397.57 HUMAN 1 0.4508 36.2273 GAEENGNSDKKKKAK-p O15355;S537-p GAEENGNSDKKKKAK 0.327770976645339 0.0049263559840713 0.214333333333333 -0.525666666666667 9.0601265062122 33.6661147570146 0.214333333333333 -0.525666666666667 0.124161613986542 0.00042992086639467 1.8187717127451 -7.61583495682405 O15355 PPM1G O15355.S537.p_PPM1G O15355_S537s_1_1_537_537 O15355 O15355 Protein phosphatase 1G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17439.17439.4 20.93 20.93 3.937 3 1 1 0 794.4207 3093.7085 N534n S537s TMT10 521 (R) KLEEVLSTEGAEEnGNsDKK (K) KLEEVLS(0.0)T(0.0)EGAEEN(0.99)GN(0.0)S(0.99)DKK K:TMT10,n:Deamidated,s:Phosphorylated S PPM1G 59955.3 2 5 1835.1 112.03 HUMAN 1 9.0601 -33.6661 GAEETSWSGEERAAK-p Q9H7N4;S965-p GAEETSWSGEERAAK 0.975439658986068 0.961702448713379 0.00566666666666666 -0.012 0.20965405518701 0.242863942599622 0.00566666666666666 -0.012 0.952872063679965 0.945613373663116 0.0618901182825969 -0.0714338832444014 Q9H7N4 SCAF1 Q9H7N4.S965.p_SCAF1 Q9H7N4_S965s _1_1_965_965 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8409.8409.3 12.33 12.33 2.267 3 1 1 0 549.5686 1566.7233 S965s TMT10 958 (K) GAEETSWsGEER (A) GAEET(0.0)S(0.0)WS(0.99)GEER s:Phosphorylated S SCAF1 139895 3 20 76.1 647.25 HUMAN 1 0.2097 -0.2429 GAEFWKSSPSILAVQ-p O14646;S90-p GAEFWKSSPSILAVQ 0.468467993613407 0.227641136635105 -0.233666666666667 0.194 6.08053798116151 8.46668679204092 -0.233666666666667 0.194 0.246573387617177 0.14234142876922 -1.29889807271599 1.71546043388522 O14646 CHD1 O14646.S90.p_CHD1 O14646_S90s _1_1_90_90 O14646 O14646|O14646-2 Chromodomain-helicase-DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14456.14456.2 11.72 4.36 1.36 3 1 1 0 683.8693 1286.763 S90s TMT10 89 (K) SsPSILAVQR (S) S(0.0)S(0.99)PS(0.0)ILAVQR s:Phosphorylated S CHD1 197825.1 2 1 848.1 212.75 HUMAN 1 -6.0805 8.4667 GAEGPAISDGEEGGG-p Q6PKG0;S90-p GAEGPAISDGEEGGG 0.331074010334231 0.228743223122644 0.136333333333333 -0.143 8.9681205394698 8.43879818948028 0.136333333333333 -0.143 0.126820057585749 0.143258427931777 1.80284424509195 -1.71063448111536 Q6PKG0 LARP1 Q6PKG0.S90.p_LARP1 Q6PKG0_S90s _1_1_90_90 Q6PKG0 Q6PKG0 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17814.17814.3 33.2 33.2 18.205 2 1 1 0 1279.6087 3756.8375 S90s TMT10 74 (R) ESPRPLQLPGAEGPAIsDGEEGGGEPGAGGGAAGAAGAGR (R) ES(0.0)PRPLQLPGAEGPAIS(0.99)DGEEGGGEPGAGGGAAGAAGAGR s:Phosphorylated S LARP1 123907.4 22 32 28.1 931.95 HUMAN 1 8.9681 -8.4388 GAEIITQSPGRSSVA-p P11137;S1782-p GAEIITQSPGRSSVA 0.948583712463726 0.920686344492123 -0.0126666666666667 0.02 0.454937788338194 0.505000105982356 -0.0126666666666667 0.02 0.900546662777126 0.890225416285738 -0.130948673338588 0.144632244498483 P11137 MAP2 P11137.S1782.p_MAP2 P11137_S1782s _1_1_1782_1782 P11137 P11137|P11137-3|P11137-4|P11137-2 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6537.6537.3 19.09 19.09 2.193 2 1 1 0 520.5798 1479.755 S1782s Hydrogen 1772 (R) VDHGAEIITQsPGR (S) VDHGAEIIT(0.0)QS(0.99)PGR s:Phosphorylated S MAP2 199979.2 4 21 117.1 560.28 HUMAN 1 -0.4549 0.505 GAEIVYKSPVVSGDT-p P10636;S713-p GAEIVYKSPVVSGDT 0.79813572883131 0.840412671405299 0.041 -0.0303333333333333 1.88975631163725 1.06156846795553 0.041 -0.0303333333333333 0.647178928793201 0.783146755813149 0.484246966324207 -0.289222988171553 P10636 MAPT P10636.S713.p_MAPT P10636_S713s _1_1_713_713 P10636 P10636-9|A0A0G2JMX7|A0A0G2JS76|A0A0G2JPD5|A0A0G2JQJ7|P10636-8|P10636-7|P10636-5|P10636-6|P10636-4|P10636-2|I3L170|P10636-3 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11278.11278.4 18.61 16.62 2.416 6 1 1 0 796.1767 3101.7198 S713s TMT10 701 (K) AKTDHGAEIVYKsPVVSGDTSPR (H) AKT(0.0)DHGAEIVY(0.0)KS(0.99)PVVS(0.0)GDT(0.0)S(0.0)PR K:TMT10,s:Phosphorylated S MAPT 79154.4 5 21 119.1 551.6 HUMAN 1 1.8898 -1.0616 GAELEYDSEHSDWHG-p Q9GZN8-2;S190-p GAELEYDSEHSDWHG 0.761770448655304 0.0261142776159022 0.0596666666666667 0.352333333333333 2.26285284112237 21.524837836587 0.0596666666666667 0.352333333333333 0.593901901670586 0.00703908511041652 0.566256703027492 4.20978115497169 Q9GZN8 C20orf27 Q9GZN8.2.S190.p_C20orf27 Q9GZN8-2_S190s _1_1_190_190 Q9GZN8-2 Q9GZN8-2 Isoform 2 of UPF0687 protein C20orf27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20550.20550.3 19.3 19.3 2.145 3 1 1 0 854.6754 2482.0455 S190s TMT10 181 (K) CVGAELEYDsEHSDWHGFD (-) CVGAELEY(0.0)DS(0.99)EHS(0.0)DWHGFD C:Carbamidomethylation,s:Phosphorylated S C20orf27 21929.7 1 1 5438.1 19.3 HUMAN 1 2.2629 21.5248 GAEPGADSAEGDVGD-p P51511;S589-p GAEPGADSAEGDVGD 0.672007483493895 0.438784249478684 -0.065 0.073 3.23478120020042 4.76746120238108 -0.065 0.073 0.4748122116231 0.333621384076556 -0.767708605148133 1.06106052255074 P51511 MMP15 P51511.S589.p_MMP15 P51511_S589s _1_1_589_589 P51511 P51511 Matrix metalloproteinase-15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22275.22275.4 22.55 22.55 99 1 1 1 0 1094.0077 4293.0274 S589s TMT10 569 (R) WPDVARPPFNPHGGAEPGADsAEGDVGDGDGDFGAGVNK (D) WPDVARPPFNPHGGAEPGADS(1.0)AEGDVGDGDGDFGAGVNK K:TMT10,s:Phosphorylated S MMP15 76147.9 4 1 5133.1 22.55 HUMAN 1 -3.2348 4.7675 GAEPNYHSLPSARTD-p Q6IAA8;S42-p GAEPNYHSLPSARTD 0.471941186312508 0.578287092757292 0.252666666666667 -0.0533333333333333 6.01931676490389 3.20912321422509 0.252666666666667 -0.0533333333333333 0.250073874870895 0.477625690526599 1.28800399418498 -0.762465368310471 Q6IAA8 LAMTOR1 Q6IAA8.S42.p_LAMTOR1 Q6IAA8_S42s _1_1_42_42 Q6IAA8 Q6IAA8|F5H3Y3|F5GX19|F5H479 Ragulator complex protein LAMTOR1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12117.12117.3 20.57 20.57 2.945 3 1 1 0 669.3274 1926.0031 S42s TMT10 32 (K) ALNGAEPNYHsLPSAR (T) ALNGAEPNY(0.0)HS(0.99)LPS(0.0)AR s:Phosphorylated S LAMTOR1 17858.6 2 3 1333.1 152.96 HUMAN 1 6.0193 -3.2091 GAEVDDFSWEPPTEA-p O60232;S12-p GAEVDDFSWEPPTEA 0.93527869194269 0.200590109916174 0.013 -0.145666666666667 0.568931054290498 9.17987664426321 0.013 -0.145666666666667 0.877216707295685 0.120784814198557 0.161955372461216 -1.83882897034606 O60232 SSSCA1 O60232.S12.p_SSSCA1 O60232_S12s_1_1_12_12 O60232 O60232|E9PK41 Sjoegren syndrome/scleroderma autoantigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30903.30903.3 21.81 18.09 8.29 3 1 1 0 886.7303 2577.2194 N4n S12s Acetyl 2 (M) ALnGAEVDDFsWEPPTEAETK (V) ALN(1.0)GAEVDDFS(0.99)WEPPT(0.0)EAET(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S SSSCA1 21930.4 2 1 2328.1 87.72 HUMAN 1 0.5689 -9.1799 GAEWSRDSMEINEAD-p Q5TH69;S471-p GAEWSRDSMEINEAD 0.189754891574309 0.405041236427232 -0.225666666666667 -0.0826666666666666 14.1240085517417 5.22353129475345 -0.225666666666667 -0.0826666666666666 0.0386900369804474 0.300363302338709 -2.71571519349848 -1.14462788595424 Q5TH69 ARFGEF3 Q5TH69.S471.p_ARFGEF3 Q5TH69_S471s _1_1_471_471 Q5TH69 Q5TH69 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18190.18190.3 12.26 7.89 2.243 2 1 1 0 813.0182 2357.0666 S471s TMT10 463 (K) DGAEWSRDsMEINEADFR (W) DGAEWS(0.0)RDS(0.99)MEINEADFR s:Phosphorylated S ARFGEF3 244013.5 3 2 618.1 260.46 HUMAN 1 -14.124 -5.2235 GAFGDDGSLEDIRTE-p P19367-3;S273-p GAFGDDGSLEDIRTE 0.246863210495205 0.285931474947627 -0.193333333333333 0.180333333333333 11.6191517072515 7.17378192461532 -0.193333333333333 0.180333333333333 0.0688786821609999 0.191699865221452 -2.26495911331846 1.49097762117302 P19367 HK1 P19367.3.S273.p_HK1 P19367-3_S273s _1_1_273_273 P19367-3 P19367-3|P19367-2|P19367-4 Isoform 3 of Hexokinase-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30075.30075.5 18.03 18.03 3.805 4 1 1 0 928.6365 4559.1971 S273s TMT10 259 (R) MCINTEWGAFGDDGsLEDIRTEFDREIDRGSLNPGK (Q) MCINT(0.0)EWGAFGDDGS(0.99)LEDIRT(0.0)EFDREIDRGS(0.0)LNPGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HK1 103934.5 1 3 2430.1 83.63 HUMAN 1 -11.6192 7.1738 GAFGFNISFLCKLRD-p A0A0G2JH68;S1002-p GAFGFNISFLCKLRD 0.885820345057877 0.249610116560739 -0.028 -0.112 1.03564684421863 7.94123589992913 -0.028 -0.112 0.78783508146381 0.160648402039695 -0.282796315334815 -1.62445401233808 A0A0G2JH68 NotFound A0A0G2JH68.S1002.p_NotFound A0A0G2JH68_S1002s _1_1_1002_1002 A0A0G2JH68 O60610|A0A0G2JH68|O60610-3|A0A140T8Z0 Protein diaphanous homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34414.34414.3 12.69 12.69 99 1 1 1 0 695.3522 2004.0777 S1002s TMT10 993 (R) NAGAFGFNIsFLCK (L) NAGAFGFNIS(1.0)FLCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DIAPH1 142040.6 1 2 2810.1 69.79 HUMAN 1 -1.0356 -7.9412 GAFGPPSSFQPFPAV-p Q96RK1;S72-p GAFGPPSSFQPFPAV 0.995222800843425 0.400422596323296 -0.001 -0.083 0.0387849624234697 5.2862746238986 -0.00100000000000001 -0.083 0.991109191443179 0.296055093690111 -0.0116672230848254 -1.15602504779643 Q96RK1 CITED4 Q96RK1.S72.p_CITED4 Q96RK1_Y64yS71sS72s_3_3_64_72 Q96RK1 Q96RK1 Cbp/p300-interacting transactivator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.39721.39721.5 8.66 1.52 2.112 5 3 3 0 1172.5714 5619.0167 Y64y S71s S72s TMT10 46 (R) PRGAPLGPPPPRQPGALAyGAFGPPssFQPFPAVPPPAAGIAHLQPVATPYPGR (A) PRGAPLGPPPPRQPGALAY(0.99)GAFGPPS(0.99)S(0.99)FQPFPAVPPPAAGIAHLQPVAT(0.0)PY(0.0)PGR y:Phosphorylated Y,s:Phosphorylated S CITED4 18682.9 6 2 6925.1 8.66 HUMAN 1 -0.0388 -5.2863 GAFTGEISPGMIKDC-p P60174;S117-p GAFTGEISPGMIKDC 0.654253083415848 0.656245013907034 0.072 0.0533333333333334 3.45354848144031 2.50013334103095 0.072 0.0533333333333334 0.451486898109538 0.56232405994198 0.811119185713892 0.616838669045332 P60174 TPI1 P60174.S117.p_TPI1 P60174_S117s _1_1_117_117 P60174 P60174|P60174-1 Triosephosphate isomerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25715.25715.2 18.35 18.35 3.569 3 1 1 0 1080.5636 2080.1513 S117s TMT10 107 (K) VTNGAFTGEIsPGMIK (D) VT(0.0)NGAFT(0.0)GEIS(0.99)PGMIK K:TMT10,s:Phosphorylated S TPI1 31075.7 6 3 1065.1 181.63 HUMAN 1 3.4535 2.5001 GAFTPGCSKTHLPGF-p P30044;S101-p GAFTPGCSKTHLPGF 0.902824138970015 0.0163580944084567 -0.0203333333333333 0.477 0.870690614772397 24.6707858434121 -0.0203333333333333 0.477 0.818334646270966 0.00341131179328213 -0.241120417076354 4.95479895646742 P30044 PRDX5 P30044.S101.p_PRDX5 P30044_S101s _1_1_101_101 P30044 P30044|P30044-3|P30044-2 Peroxiredoxin-5, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30454.30454.3 12.97 12.97 2.522 2 1 1 0 711.3705 2052.1352 S101s TMT10 87 (K) GVLFGVPGAFTPGCsK (T) GVLFGVPGAFT(0.0)PGCS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRDX5 22314.2 1 2 3335.1 53.56 HUMAN 1 -0.8707 24.6708 GAGALRRSDSPEIPF-p Q12888-2;S1465-p GAGALRRSDSPEIPF 0.403562803292896 0.0213682505804609 0.118333333333333 0.323666666666667 7.27487082984664 22.8381086342084 0.118333333333333 0.323666666666667 0.187289278675336 0.00520222505704342 1.50904729135371 4.51125376495126 Q12888 TP53BP1 Q12888.2.S1465.p_TP53BP1 Q12888-2_S1465sS1467s_2_2_1465_1467 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26295.26295.5 26.82 21.96 1.108 7 2 2 0 887.2216 4272.1483 S1465s S1467s TMT10 1455 (R) TDVGAGALRRsDsPEIPFQAAAGPSDGLDASSPGNSFVGLR (V) T(0.0)DVGAGALRRS(0.99)DS(0.99)PEIPFQAAAGPS(0.0)DGLDAS(0.0)S(0.0)PGNS(0.0)FVGLR s:Phosphorylated S TP53BP1 216167.2 13 107 3.1 2297.07 HUMAN 1 7.2749 22.8381 GAGALVHSE______-p P21291;S192-p GAGALVHSE______ 0.681222809414458 0.990324797150279 -0.0786666666666667 -0.00266666666666667 3.12939269156203 0.0623066095122116 -0.0786666666666667 -0.00266666666666672 0.486475228626955 0.985755795437074 -0.746573083321163 -0.0186914554123294 P21291 CSRP1 P21291.S192.p_CSRP1 P21291_S192s _1_1_192_192 P21291 P21291|E9PP21 Cysteine and glycine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.20855.20855.2 23.34 23.34 99 1 1 1 0 871.9082 1662.8437 S192s TMT10 179 (K) GFGFGQGAGALVHsE (-) GFGFGQGAGALVHS(1.0)E s:Phosphorylated S CSRP1 21422.8 7 1 5070.1 23.34 HUMAN 1 -3.1294 -0.0623 GAGATSGSPPAGRN_-p P16455;S201-p GAGATSGSPPAGRN_ 0.608004594906275 0.0649016353444586 -0.0703333333333333 -0.209 4.0020955343351 15.8056395968268 -0.0703333333333333 -0.209 0.397915124362762 0.026268546342372 -0.917530153159828 -3.02885133678702 P16455 MGMT P16455.S201.p_MGMT P16455_S201s_1_1_201_201 P16455 P16455 Methylated-DNA--protein-cysteine methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4419.4419.2 9.18 5.87 2.17 3 1 1 0 755.3479 1428.7393 S201s N207n TMT10 194 (K) GAGATSGsPPAGRn (-) GAGAT(0.0)S(0.0)GS(0.99)PPAGRN(1.0) s:Phosphorylated S,n:Deamidated MGMT 21930.9 6 2 3985.1 39.69 HUMAN 1 -4.0021 -15.8056 GAGEEALTPSVPINK-p Q02880;T1292-p GAGEEALTPSVPINK 0.260789944862731 0.180624739981569 -0.169 0.176 11.0585574508673 9.77609399129484 -0.169 0.176 0.0783689909362283 0.105290842524165 -2.16637129486569 1.94206966149411 Q02880 TOP2B Q02880.T1292.p_TOP2B Q02880_T1292t _1_1_1292_1292 Q02880 Q02880 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26620.26620.5 27.81 27.81 3.009 4 1 1 0 1054.97 5190.8435 T1292t TMT10 1261 (K) KKGDLDTAAVKVEFDEEFSGAPVEGAGEEALtPSVPINK (G) KKGDLDT(0.0)AAVKVEFDEEFS(0.0)GAPVEGAGEEALT(0.99)PS(0.0)VPINK K:TMT10,t:Phosphorylated T TOP2B 184233.7 1 29 71.1 658.36 HUMAN 1 -11.0586 9.7761 GAGESPGTPPFRVIG-p Q8TEQ6;T51-p GAGESPGTPPFRVIG 0.408887654027387 0.456480150259774 0.14 -0.074 7.16385442406583 4.54142071742745 0.14 -0.074 0.192138571536099 0.351445452570054 1.4896656859648 -1.01911753513771 Q8TEQ6 GEMIN5 Q8TEQ6.T51.p_GEMIN5 Q8TEQ6_T51t _1_1_51_51 Q8TEQ6 Q8TEQ6 Gem-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15202.15202.3 16.11 16.11 4.167 2 1 1 0 578.9528 1654.875 T51t TMT10 41 (R) VGPGAGESPGtPPFR (V) VGPGAGES(0.0)PGT(0.99)PPFR t:Phosphorylated T GEMIN5 170925.5 2 1 798.1 223.37 HUMAN 1 7.1639 -4.5414 GAGGHLESPARSLPQ-p Q6NZ36-2;S216-p GAGGHLESPARSLPQ 0.463111041805375 0.112680700984798 0.097 -0.325 6.16841877085262 12.5054995394612 0.097 -0.325 0.241634044324134 0.0561629674191325 1.31451102053306 -2.42106222105151 Q6NZ36 FAAP20 Q6NZ36.2.S216.p_FAAP20 Q6NZ36-2_S216s _1_1_216_216 Q6NZ36-2 Q6NZ36-2|Q6NZ36-3|Q6NZ36-4|Q6NZ36-5 Isoform 2 of Fanconi anemia core complex-associated protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9029.9029.3 22.3 22.3 99 1 1 1 0 575.2999 1643.9179 S216s TMT10 206 (R) LLHGAGGHLEsPAR (S) LLHGAGGHLES(1.0)PAR s:Phosphorylated S FAAP20 31892.8 4 1 5160.1 22.3 HUMAN 1 6.1684 -12.5055 GAGGNSDSDNLDSTD-p Q8IWZ3-6;S1593-p GAGGNSDSDNLDSTD 0.699674004566978 0.184416070311497 -0.0696666666666667 0.150666666666667 2.91356835022391 9.65225284244936 -0.0696666666666667 0.150666666666667 0.511261588410463 0.108336478776357 -0.702801709726719 1.92060660987432 Q8IWZ3 ANKHD1 Q8IWZ3.6.S1593.p_ANKHD1 Q8IWZ3-6_S1593s _1_1_1593_1593 Q8IWZ3-6 Q8IWZ3|Q8IWZ3-6|Q8IWZ3-4 Isoform 6 of Ankyrin repeat and KH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7714.7929.3 25.44 25.44 2.257 8 1 1 0 1024.0908 2990.2918 S1593s TMT10 1584 (R) GGGAGGNSDsDNLDSTDCNSESSSGGK (S) GGGAGGNS(0.0)DS(0.99)DNLDS(0.0)T(0.0)DCNS(0.0)ES(0.0)S(0.0)S(0.0)GGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANKHD1 279224.1 3 32 287.1 383.69 HUMAN 1 -2.9136 9.6523 GAGGQAYSPGQPQGL-p Q9ULL5-3;S444-p GAGGQAYSPGQPQGL 0.289073375000317 0.322797952270067 -0.163333333333333 0.126333333333333 10.1627973435779 6.49244517220978 -0.163333333333333 0.126333333333333 0.0963208409521542 0.224261892513067 -2.0100086529959 1.37149013735322 Q9ULL5 PRR12 Q9ULL5.3.S444.p_PRR12 Q9ULL5-3_S444s _1_1_444_444 Q9ULL5-3 Q9ULL5-3 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23589.23589.4 24.05 24.05 1.191 5 1 1 0 1058.0199 4149.079 S444s TMT10 432 (K) ASGAGGAGGQAYsPGQPQGLLGPQAYGQGFGGGQAQDLSK (A) AS(0.0)GAGGAGGQAY(0.0)S(0.99)PGQPQGLLGPQAY(0.0)GQGFGGGQAQDLS(0.0)K K:TMT10,s:Phosphorylated S PRR12 212010 1 6 182.1 477.91 HUMAN 1 -10.1628 6.4924 GAGLKYNSRHEKVNG-p Q9Y5Y6;S24-p GAGLKYNSRHEKVNG 0.357172198749098 0.350019155851416 0.345 -0.548 8.31203523530366 6.04486695855373 0.345 -0.548 0.147501513457639 0.248606972113534 1.68925168469863 -1.29224276400596 Q9Y5Y6 ST14 Q9Y5Y6.S24.p_ST14 Q9Y5Y6_S24s _1_1_24_24 Q9Y5Y6 Q9Y5Y6 Suppressor of tumorigenicity 14 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10429.10429.5 10.5 10.5 10.499 2 1 1 0 478.6581 2309.2969 S24s TMT10 15 (K) DFGAGLKYNsRHEK (V) DFGAGLKY(0.0)NS(0.99)RHEK K:TMT10,s:Phosphorylated S ST14 97050.2 2 1 4432.1 31.5 HUMAN 1 8.312 -6.0449 GAGPAPATPSRTPSL-p B7WPE2;T882-p GAGPAPATPSRTPSL 0.941984280202675 0.574693399224871 0.0146666666666667 -0.057 0.51084061374873 3.24371169133534 0.0146666666666667 -0.057 0.88902902210706 0.473836848201887 0.146235448973043 -0.769379615695827 B7WPE2 EML3 B7WPE2.T882.p_EML3 B7WPE2_T882t _1_1_882_882 B7WPE2 B7WPE2|Q32P44|G3V195 Echinoderm microtubule associated protein like 3, isoform CRA_e HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12673.12673.2 17.79 17.79 1.945 2 1 1 0 844.4404 1607.9067 T882t TMT10 870 (R) VLGAGGAGPAPAtPSR (T) VLGAGGAGPAPAT(0.99)PS(0.0)R t:Phosphorylated T EML3 96366.1 6 9 1068.1 181 HUMAN 1 0.5108 -3.2437 GAGRAAVSDELRQWY-p Q9P2Q2;S925-p GAGRAAVSDELRQWY 0.135547194579556 0.0847774187878305 -0.267 -0.204333333333333 17.8035205149579 14.1866859052599 -0.267 -0.204333333333333 0.0165824214407413 0.038135672513677 -3.42261027058663 -2.72559763278473 Q9P2Q2 FRMD4A Q9P2Q2.S925.p_FRMD4A Q9P2Q2_S925s _1_1_925_925 Q9P2Q2 Q9P2Q2 FERM domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20463.20463.3 16.02 13.12 14.641 2 1 1 0 644.3185 1850.9711 S925s TMT10 922 (R) AAVsDELRQWYQR (S) AAVS(0.99)DELRQWY(0.0)QR s:Phosphorylated S FRMD4A 116026.8 1 14 787.1 225.06 HUMAN 1 -17.8035 -14.1867 GAGSATLSMAYAGAR-p P40926;S250-p GAGSATLSMAYAGAR 0.959071954194787 0.83116424333031 -0.0106666666666667 -0.0233333333333333 0.351763651990723 1.1239357255916 -0.0106666666666667 -0.0233333333333333 0.922196850762864 0.771980672630815 -0.102307650141899 -0.304653321270107 P40926 MDH2 P40926.S250.p_MDH2 P40926_S250s _1_1_250_250 P40926 P40926 Malate dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15459.15459.3 8.56 8.56 1.473 4 1 1 0 588.6168 1683.8686 S250s TMT10 242 (K) AGAGSATLsMAYAGAR (F) AGAGS(0.0)AT(0.0)LS(0.99)MAY(0.0)AGAR s:Phosphorylated S MDH2 35959.1 1 6 2175.1 94.5 HUMAN 1 -0.3518 -1.1239 GAGSDSNSPGNVQPN-p Q9BYJ9;S350-p GAGSDSNSPGNVQPN 0.885820345057877 0.100504954607395 -0.0233333333333333 -0.266 1.03517823817068 13.1826599621474 -0.0233333333333333 -0.266 0.787920093873051 0.0480544934655772 -0.28267938873868 -2.54261542498047 Q9BYJ9 YTHDF1 Q9BYJ9.S350.p_YTHDF1 Q9BYJ9_S350s _1_1_350_350 Q9BYJ9 Q9BYJ9|Q9BYJ9-2 YTH domain-containing family protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16367.16367.3 25.61 25.61 1.146 7 1 1 0 1344.6407 3951.9473 S350s TMT10 335 (R) NAAFGQSGGAGSDSNsPGNVQPNSAPSVESHPVLEK (L) NAAFGQS(0.0)GGAGS(0.0)DS(0.0)NS(0.99)PGNVQPNS(0.0)APS(0.0)VES(0.0)HPVLEK K:TMT10,s:Phosphorylated S YTHDF1 61043.7 3 13 1868.2 109.97 HUMAN 1 -1.0352 -13.1827 GAGTMSVSLVADENP-p P06396;S313-p GAGTMSVSLVADENP 0.503143536959007 0.00985022343060253 -0.110333333333333 0.533 5.50343444224385 28.233347576294 -0.110333333333333 0.533 0.281615500817061 0.00150198377877413 -1.19556756460014 5.90347159645578 P06396 GSN P06396.S313.p_GSN P06396_S313s_1_1_313_313 P06396 P06396|A0A0A0MT01|A0A0A0MS51|P06396-3|P06396-4|P06396-2 Gelsolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27968.27968.3 16.19 16.19 2.329 4 1 1 0 1006.5079 2921.5443 M310m S313s TMT10 303 (K) VSNGAGTmSVsLVADENPFAQGALK (S) VS(0.0)NGAGT(0.0)M(1.0)S(0.0)VS(0.99)LVADENPFAQGALK K:TMT10,m:Oxidized methionine,s:Phosphorylated S GSN 86095.3 6 1 1746.1 117.91 HUMAN 1 -5.5034 28.2333 GAGTPRHSPTLPEPG-p Q86XN8-3;S514-p GAGTPRHSPTLPEPG 0.547942963034024 0.150746759961846 -0.0826666666666667 0.193 4.82306950929989 10.8086221869562 -0.0826666666666667 0.193 0.3293768327226 0.0830114082073807 -1.07153266130896 2.12167688085561 Q86XN8 MEX3D Q86XN8.3.S514.p_MEX3D Q86XN8-3_S514s _1_1_514_514 Q86XN8-3 Q86XN8-3|Q86XN8-2 Isoform 3 of RNA-binding protein MEX3D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20676.20676.4 11.93 7.81 1.93 6 1 1 0 773.6614 3011.6588 S514s TMT10 505 (R) SSGAGTPRHsPTLPEPGGLRLELPLSR (R) S(0.0)S(0.0)GAGT(0.0)PRHS(0.99)PT(0.0)LPEPGGLRLELPLS(0.0)R s:Phosphorylated S MEX3D 67266.1 5 2 2383.1 85.65 HUMAN 1 -4.8231 10.8086 GAHKRPASVSSSAAV-p Q7Z5L9;S240-p GAHKRPASVSSSAAV 0.0990612726298986 0.37236988138142 -0.323 0.121666666666667 21.2362314351312 5.69166636379227 -0.323 0.121666666666667 0.00752275393431945 0.269670452337381 -4.14942594005196 1.22915710102315 Q7Z5L9 IRF2BP2 Q7Z5L9.S240.p_IRF2BP2 Q7Z5L9_S240s _1_1_240_240 Q7Z5L9 Q7Z5L9|Q7Z5L9-2 Interferon regulatory factor 2-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4608.4608.3 22.9 22.9 1.231 4 1 1 0 673.9987 1940.0147 S240s TMT10 237 (K) RPAsVSSSAAVEHEQR (E) RPAS(0.99)VS(0.0)S(0.0)S(0.0)AAVEHEQR s:Phosphorylated S IRF2BP2 61765.3 4 5 154.1 504.92 HUMAN 1 -21.2362 5.6917 GAHLDMNSLDRAQAA-p O94826;S110-p GAHLDMNSLDRAQAA 0.891062470744815 0.00899192020645995 -0.023 -0.458 0.977981374586766 28.9681168422876 -0.023 -0.458 0.798365685944486 0.00126820165548682 -0.26834613095098 -6.11495536748356 O94826 TOMM70A O94826.S110.p_TOMM70A O94826_S110s _1_1_110_110 O94826 O94826 Mitochondrial import receptor subunit TOM70 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11896.11896.5 20.07 20.07 12.516 3 1 1 0 676.3352 3297.6799 S110s TMT10 90 (R) ASPAPGSGHPEGPGAHLDMNsLDRAQAAK (N) AS(0.0)PAPGS(0.0)GHPEGPGAHLDMNS(0.99)LDRAQAAK K:TMT10,s:Phosphorylated S TOMM70 68138.3 2 4 776.1 227.2 HUMAN 1 -0.978 -28.9681 GAIGQRLSNGLARLS-p Q16643-3;S134-p GAIGQRLSNGLARLS 0.379242892564822 0.026369271971688 -0.157 -0.959 7.7792075752907 21.4386644371879 -0.157 -0.959 0.166755145045459 0.00718015064691917 -1.59683413664184 -4.1904467951523 Q16643 DBN1 Q16643.3.S134.p_DBN1 Q16643-3_S134s _1_1_134_134 Q16643-3 Q16643-3|Q16643-2 Isoform 3 of Drebrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10362.10362.2 10.56 3.51 99 1 1 1 0 520.2796 959.5835 S134s TMT10 133 (R) LsNGLAR (L) LS(1.0)NGLAR s:Phosphorylated S DBN1 76925.9 1 2 1729.1 119.21 HUMAN 1 -7.7792 -21.4387 GAIKFVLSGANIMCP-p Q9ULC4;S107-p GAIKFVLSGANIMCP 0.390513422575628 0.0774026051251038 0.124 0.256666666666667 7.54736606296064 14.7433428484179 0.124 0.256666666666667 0.175899009412158 0.0335479289955062 1.55652670728074 2.82864488926458 Q9ULC4 MCTS1 Q9ULC4.S107.p_MCTS1 Q9ULC4_S107s _1_1_107_107 Q9ULC4 Q9ULC4-3 Malignant T-cell-amplified sequence 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30601.30601.3 19 19 4.876 3 1 1 0 820.0912 2378.2976 S107s TMT10 104 (K) FVLsGANIMCPGLTSPGAK (L) FVLS(0.99)GANIMCPGLT(0.0)S(0.0)PGAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MCTS1 20783.1 1 1 5473.1 19 HUMAN 1 7.5474 14.7433 GAINDTESVDSLSEG-p Q86XZ4;S143-p GAINDTESVDSLSEG 0.978588331593317 0.246900105530861 -0.00433333333333334 0.125 0.185864125424097 8.00411783137714 -0.00433333333333334 0.125 0.958106060838014 0.158339116327378 -0.0550079115495471 1.63535631517583 Q86XZ4 SPATS2 Q86XZ4.S143.p_SPATS2 Q86XZ4_T141tS143s_2_2_141_143 Q86XZ4 Q86XZ4|F8VS10 Spermatogenesis-associated serine-rich protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29337.29337.4 9.12 9.12 1.335 7 2 2 0 953.6765 3650.7442 N139n T141t S143s TMT10 127 (K) GGMNGYHVNGAInDtEsVDSLSEGLETLSIDAR (E) GGMN(0.0)GY(0.0)HVN(0.0)GAIN(0.99)DT(0.99)ES(0.99)VDS(0.0)LS(0.0)EGLET(0.0)LS(0.0)IDAR n:Deamidated,t:Phosphorylated T,s:Phosphorylated S SPATS2 59886 4 5 3545.1 48.53 HUMAN 1 -0.1859 8.0041 GAKANQISPSNSSLK-p Q86UU0;S88-p GAKANQISPSNSSLK 0.34689437832203 0.0658576608239097 -0.143 -0.226666666666667 8.54235521306309 15.717905415378 -0.143 -0.226666666666667 0.139882852115282 0.0268046078845494 -1.72914040489362 -3.0121286232967 Q86UU0 BCL9L Q86UU0.S88.p_BCL9L Q86UU0_S88s _1_1_88_88 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11726.11726.3 12.68 9.37 1.433 4 1 1 0 595.3176 1703.9692 S88s TMT10 84 (K) ANQIsPSNSSLK (N) ANQIS(0.99)PS(0.0)NS(0.0)S(0.0)LK K:TMT10,s:Phosphorylated S BCL9L 157526.3 8 3 139.1 524.37 HUMAN 1 -8.5424 -15.7179 GAKDIDISSPEFKIK-p Q09666;S176-p GAKDIDISSPEFKIK 0.715840758445085 0.0845282830231599 -0.053 -0.193333333333333 2.73921855358616 14.2047077405255 -0.053 -0.193333333333333 0.532204012613945 0.0379777495325663 -0.666927968273156 -2.72891506431012 Q09666 AHNAK Q09666.S176.p_AHNAK Q09666_S176sS177s_2_2_176_177 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25525.25525.3 11.42 11.42 99 2 2 2 0 747.0612 2079.2305 S176s S177s TMT10 172 (K) DIDIssPEFKIK (I) DIDIS(1.0)S(1.0)PEFKIK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 171 1.1 4313.36 HUMAN 1 -2.7392 -14.2047 GAKDVTGSPPAKQLK-p O75362;S570-p GAKDVTGSPPAKQLK 0.187254795627764 0.00111131906301753 -0.220333333333333 -1.265 14.2951877322146 49.6482353067774 -0.220333333333333 -1.265 0.0371947142677672 1.08436744164254e-05 -2.74727833623231 -15.4550796732654 O75362 ZNF217 O75362.S570.p_ZNF217 O75362_S570s _1_1_570_570 O75362 O75362 Zinc finger protein 217 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9248.9248.2 13.07 9.5 1.145 2 1 1 0 705.3759 1329.7778 S570s TMT10 566 (K) DVTGsPPAK (Q) DVT(0.0)GS(0.99)PPAK K:TMT10,s:Phosphorylated S ZNF217 117152.8 3 8 394.1 330.8 HUMAN 1 -14.2952 -49.6482 GAKKRKASGSENEGD-p Q02880;S1550-p GAKKRKASGSENEGD 0.761957542148217 0.0719780099760954 0.0423333333333333 -0.222333333333333 2.26023280665637 15.1869880122284 0.0423333333333333 -0.222333333333333 0.594260302014149 0.0302901342909933 0.565691182544316 -2.91166595086359 Q02880 TOP2B Q02880.S1550.p_TOP2B Q02880_S1550s _1_1_1550_1550 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4584.4584.2 11.67 9.02 1.199 3 1 1 0 945.4153 1809.8565 S1550s Hydrogen 1548 (R) KAsGSENEGDYNPGR (K) KAS(0.99)GS(0.0)ENEGDY(0.0)NPGR K:TMT10-Lys-Only,s:Phosphorylated S TOP2B 184233.7 23 45 71.1 658.36 HUMAN 1 2.2602 -15.187 GAKLRKVSKQEEASG-p P50552;S239-p GAKLRKVSKQEEASG 0.080291775209528 0.00908726168906131 -0.366333333333333 1.20866666666667 23.387647439058 28.8789576351473 -0.366333333333333 1.20866666666667 0.00458390128110321 0.00129450650304452 -4.64666960108942 6.08898370879312 P50552 VASP P50552.S239.p_VASP P50552_S239s _1_1_239_239 P50552 P50552 Vasodilator-stimulated phosphoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6031.6031.3 12.74 12.74 2.271 3 1 1 0 794.4395 2301.3381 S239s Hydrogen 237 (R) KVsKQEEASGGPTAPK (A) KVS(0.99)KQEEAS(0.0)GGPT(0.0)APK K:TMT10-Lys-Only,s:Phosphorylated S VASP 40000.2 3 2 2957.1 64.75 HUMAN 1 -23.3876 28.879 GAKNNEESPTATVAE-p Q13451;S13-p GAKNNEESPTATVAE 0.230960841866505 0.071613978754124 0.488666666666667 0.276333333333333 12.233859650205 15.2201814459727 0.488666666666667 0.276333333333333 0.0597880012569965 0.0300595071294941 2.37388474642244 2.91791086401737 Q13451 FKBP5 Q13451.S13.p_FKBP5 Q13451_S13s _1_1_13_13 Q13451 Q13451|Q13451-2 Peptidyl-prolyl cis-trans isomerase FKBP5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18514.18514.4 20.94 22.11 2.342 7 1 1 0 973.4814 3810.9158 S13s Acetyl 1 (-) MTTDEGAKNNEEsPTATVAEQGEDITSKK (D) MT(0.0)T(0.0)DEGAKNNEES(0.99)PT(0.0)AT(0.0)VAEQGEDIT(0.0)S(0.0)KK K:TMT10,s:Phosphorylated S FKBP5 51724.7 9 1 1478.1 138.78 HUMAN 1 12.2339 15.2202 GAKNYAESDHSEDED-p Q9P2R6;S53-p GAKNYAESDHSEDED 0.941601783060378 0.363033799858537 -0.0153333333333333 0.089 0.513899071261037 5.83420862970241 -0.0153333333333333 0.0890000000000001 0.88840315638682 0.26096312060246 -0.14706724707898 1.25468155886057 Q9P2R6 RERE Q9P2R6.S53.p_RERE Q9P2R6_S53sS56s_2_2_53_56 Q9P2R6 Q9P2R6 Arginine-glutamic acid dipeptide repeats protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8464.8464.4 15.19 15.19 2.538 7 2 2 0 937.6507 3587.6461 S53s S56s TMT10 49 (K) NYAEsDHsEDEDNDNNSATAEESTKK (N) NY(0.0)AES(0.99)DHS(0.99)EDEDNDNNS(0.0)AT(0.0)AEES(0.0)T(0.0)KK K:TMT10,s:Phosphorylated S RERE 173561.6 3 11 278.1 389.04 HUMAN 1 -0.5139 5.8342 GAKRRRLSESSALKQ-p Q96S55;S75-p GAKRRRLSESSALKQ 0.0219445476003805 0.468996484533376 -1.14033333333333 0.089 38.3806615896383 4.38282244779747 -1.14033333333333 0.0890000000000001 0.000145189042462571 0.364516973038633 -9.44700888884529 0.989455349748277 Q96S55 WRNIP1 Q96S55.S75.p_WRNIP1 Q96S55_S75s _1_1_75_75 Q96S55 Q96S55|Q96S55-2 ATPase WRNIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6987.6987.2 10.58 10.58 2.326 3 1 1 0 650.3461 1219.7208 S75s Hydrogen 73 (R) RLsESSALK (Q) RLS(0.99)ES(0.0)S(0.0)ALK K:TMT10-Lys-Only,s:Phosphorylated S WRNIP1 72873.4 8 2 519.1 284.6 HUMAN 1 -38.3807 4.3828 GAKTVQGSGHQEHIN-p Q14247;S47-p GAKTVQGSGHQEHIN 0.0530637440823008 0.323405288051614 -0.544333333333333 -0.195 27.7133520188175 6.48246104542084 -0.544333333333333 -0.195 0.00169303056280043 0.224778048014899 -5.76546827746721 -1.36972975085061 Q14247 CTTN Q14247.S47.p_CTTN Q14247_S47s _1_1_47_47 Q14247 Q14247-2|Q14247-3 Src substrate cortactin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6567.6567.5 7.72 7.72 7.72 2 1 1 0 445.4349 2143.1773 S47s TMT10 43 (K) TVQGsGHQEHINIHK (L) T(0.0)VQGS(0.99)GHQEHINIHK K:TMT10,s:Phosphorylated S CTTN 61756.2 1 1 493.1 293.68 HUMAN 1 -27.7134 -6.4825 GALLGDRSLRVDIAE-p Q15056;S110-p GALLGDRSLRVDIAE 0.971185861810661 0.0350932305641146 0.00566666666666666 -0.279333333333333 0.248850669743803 19.5848673181158 0.00566666666666665 -0.279333333333333 0.944310748517911 0.0110030546036056 0.0731550940100479 -3.78696928918716 Q15056 EIF4H Q15056.S110.p_EIF4H Q15056_S110s _1_1_110_110 Q15056 Q15056|Q15056-2 Eukaryotic translation initiation factor 4H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22848.22848.4 18.95 18.95 7.045 3 1 1 0 700.6132 2719.4576 S110s TMT10 97 (K) EALTYDGALLGDRsLRVDIAEGR (K) EALT(0.0)Y(0.0)DGALLGDRS(0.99)LRVDIAEGR s:Phosphorylated S EIF4H 27441.6 2 5 2065.1 99.65 HUMAN 1 0.2489 -19.5849 GALRRSDSPEIPFQA-p Q12888-2;S1467-p GALRRSDSPEIPFQA 0.519175827888807 0.0857344397549443 0.0876666666666667 0.188666666666667 5.25816715005566 14.1191622235062 0.0876666666666667 0.188666666666667 0.297977371590809 0.0387332356127984 1.15116510129841 2.71317880934268 Q12888 TP53BP1 Q12888.2.S1467.p_TP53BP1 Q12888-2_S1467s _1_1_1467_1467 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25070.25274.4 32.68 29.74 1.139 6 1 1 0 878.6741 3431.7029 S1467s TMT10 1464 (R) RSDsPEIPFQAAAGPSDGLDASSPGNSFVGLR (V) RS(0.0)DS(0.99)PEIPFQAAAGPS(0.0)DGLDAS(0.0)S(0.0)PGNS(0.0)FVGLR s:Phosphorylated S TP53BP1 216167.2 27 62 3.1 2297.07 HUMAN 1 5.2582 14.1192 GALSEAMSLEGDEWE-p O60566-3;S16-p GALSEAMSLEGDEWE 0.243884788957919 0.0814552213773805 -0.181 -0.197666666666667 11.7222270127225 14.4393768578836 -0.181 -0.197666666666667 0.0672631649972156 0.0359800957051695 -2.28316012549738 -2.77222546422898 O60566 BUB1B O60566.3.S16.p_BUB1B O60566-3_S16s _1_1_16_16 O60566-3 O60566-3|O60566-2|H0YN44 Isoform 3 of Mitotic checkpoint serine/threonine-protein kinase BUB1 beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29547.29547.3 10.05 10.05 5.505 3 1 1 0 892.7559 2596.2853 S16s TMT10 7 (K) EGGALSEAMsLEGDEWELSK (E) EGGALS(0.0)EAMS(0.99)LEGDEWELS(0.0)K K:TMT10,s:Phosphorylated S BUB1B 122696.4 1 1 2392.1 85.47 HUMAN 1 -11.7222 -14.4394 GALSNDGSDDGPSVM-p O15014;S609-p GALSNDGSDDGPSVM 0.995010386084919 0.828962288733982 0.000999999999999996 0.0273333333333333 0.0447991296652549 1.13779225535687 0.000999999999999995 0.0273333333333334 0.98973764025858 0.769521528673695 0.0134672014736029 0.308062829757054 O15014 ZNF609 O15014.S609.p_ZNF609 O15014_S605sS609s_2_2_605_609 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25562.25562.4 21.03 21.03 3.221 8 2 2 0 1223.8105 4732.2623 S605s S609s TMT10 592 (K) KLSGEGDTDLGALsNDGsDDGPSVMDETSNDAFDSLERK (C) KLS(0.0)GEGDT(0.0)DLGALS(0.99)NDGS(0.99)DDGPS(0.0)VMDET(0.0)S(0.0)NDAFDS(0.0)LERK K:TMT10,s:Phosphorylated S ZNF609 152443.5 7 35 63.1 699.07 HUMAN 1 0.0448 1.1378 GALSNSESIPTIDGL-p O95630;S247-p GALSNSESIPTIDGL 0.409642501153136 0.968675141143769 0.122333333333333 -0.00433333333333334 7.14423398863279 0.195527271906707 0.122333333333333 -0.00433333333333334 0.193008573591751 0.955976623957856 1.48623774528783 -0.0578022336479634 O95630 STAMBP O95630.S247.p_STAMBP O95630_S247s _1_1_247_247 O95630 O95630|O95630-2 STAM-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22635.23109.3 14.39 14.39 1.114 5 1 1 0 865.1389 2513.4339 S247s TMT10 236 (R) SLKPGALSNSEsIPTIDGLR (H) S(0.0)LKPGALS(0.0)NS(0.0)ES(0.99)IPT(0.0)IDGLR K:TMT10,s:Phosphorylated S STAMBP 48646.6 1 3 3133.1 59.85 HUMAN 1 7.1442 -0.1955 GALVHQRTVITEEFK-p Q96I24;T76-p GALVHQRTVITEEFK 0.253428545649867 0.836687204559897 0.255333333333333 0.048 11.3627705710939 1.0877846909185 0.255333333333333 0.048 0.0730672803828585 0.778433523872865 2.21979010605122 0.295726137071357 Q96I24 FUBP3 Q96I24.T76.p_FUBP3 Q96I24_T76t _1_1_76_76 Q96I24 Q96I24|Q96I24-2 Far upstream element-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18768.18768.3 17.64 17.7 5.364 2 1 1 0 648.6884 1864.0832 T76t Hydrogen 76 (R) tVITEEFKVPDK (M) T(0.99)VIT(0.0)EEFKVPDK K:TMT10-Lys-Only,t:Phosphorylated T FUBP3 61981.6 3 3 858.1 210.79 HUMAN 1 11.3628 1.0878 GAMRNLIYDNADNKL-p Q9Y446-2;Y405-p GAMRNLIYDNADNKL 0.0431670381948327 0.369350115314893 -0.853333333333333 -0.202 30.2504612753565 5.73722721384265 -0.853333333333334 -0.202 0.000943960610473226 0.266856188438215 -6.50869037474443 -1.23732550266008 Q9Y446 PKP3 Q9Y446.2.Y405.p_PKP3 Q9Y446-2_Y405y _1_1_405_405 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16084.16084.2 12.67 8.23 99 1 1 1 0 859.4331 1637.8899 Y405y TMT10 402 (R) NLIyDNADNK (L) NLIY(1.0)DNADNK K:TMT10,y:Phosphorylated Y PKP3 89109.7 1 1 279.1 12.67 HUMAN 1 -30.2505 -5.7372 GAMSEMISPSEKGSA-p Q7Z2Z1;S1078-p GAMSEMISPSEKGSA 0.391150856817222 0.00413791477536262 -0.134666666666667 -0.891333333333333 7.52864822933348 35.0889450583889 -0.134666666666667 -0.891333333333333 0.176658759734421 0.000309817178250588 -1.55326918221514 -8.12701511248733 Q7Z2Z1 TICRR Q7Z2Z1.S1078.p_TICRR Q7Z2Z1_S1078s _1_1_1078_1078 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33884.34087.3 19.85 19.85 3.597 4 1 1 0 755.7158 2185.1649 S1078s TMT10 1067 (K) SLLFGAMSEMIsPSEK (G) S(0.0)LLFGAMS(0.0)EMIS(0.99)PS(0.0)EK K:TMT10,s:Phosphorylated S TICRR 212850 3 12 238.1 417.32 HUMAN 1 -7.5286 -35.0889 GANYDAQTE______-p Q14019;T141-p GANYDAQTE______ 0.626958714918767 0.068589727889942 0.0813333333333333 0.275 3.76725095707586 15.4787739479232 0.0813333333333333 0.275 0.420024771562589 0.0283219143586501 0.872369497580593 2.96672507110977 Q14019 COTL1 Q14019.T141.p_COTL1 Q14019_T141t _1_1_141_141 Q14019 Q14019|H3BT58 Coactosin-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6264.6264.2 14.92 11.87 13.301 2 1 1 0 881.9227 1682.875 T141t TMT10 131 (K) KAGGANYDAQtE (-) KAGGANY(0.0)DAQT(0.99)E K:TMT10,t:Phosphorylated T COTL1 16058.8 2 1 5972.1 14.92 HUMAN 1 3.7673 15.4788 GAPAPSLSRCSTPLL-p Q9HCK8;S1978-p GAPAPSLSRCSTPLL 0.151198103969209 0.0224996076696111 0.289 0.341666666666667 16.5297702502566 22.5062670328471 0.289 0.341666666666667 0.0222342751093202 0.00561530430707303 3.17058424262796 4.43384144672851 Q9HCK8 CHD8 Q9HCK8.S1978.p_CHD8 Q9HCK8_S1978s _1_1_1978_1978 Q9HCK8 Q9HCK8|Q9HCK8-2 Chromodomain-helicase-DNA-binding protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12327.12327.3 15.33 15.33 1.106 3 1 1 0 761.3517 2202.0746 S1978s TMT10 1962 (R) MNYMQNHQAGAPAPSLsR (C) MNY(0.0)MQNHQAGAPAPS(0.0)LS(0.99)R s:Phosphorylated S CHD8 292339.6 3 3 419.1 320.67 HUMAN 1 16.5298 22.5063 GAPGGRPSPPNPELR-p O43435-3;S394-p GAPGGRPSPPNPELR 0.77293343908683 0.276555179958022 -0.0516666666666667 0.187 2.13779944985287 7.35540219977379 -0.0516666666666667 0.187 0.611251664857074 0.183848368415225 -0.53910698646388 1.52264989511358 O43435 TBX1 O43435.3.S394.p_TBX1 O43435-3_S394s _1_1_394_394 O43435-3 O43435-3 Isoform C of T-box transcription factor TBX1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28084.28084.4 22.43 22.43 8.921 3 1 1 0 863.467 3370.8797 S394s TMT10 368 (R) VLSPSLPGAGGAGGLVPLPGAPGGRPsPPNPELR (L) VLS(0.0)PS(0.0)LPGAGGAGGLVPLPGAPGGRPS(0.99)PPNPELR s:Phosphorylated S TBX1 52893.7 2 1 5146.1 22.43 HUMAN 1 -2.1378 7.3554 GAPGSPQTPPERHDS-p Q96MH2;T32-p GAPGSPQTPPERHDS 0.981729293547166 0.435880727345133 -0.00400000000000001 -0.0833333333333333 0.158677604551793 4.80486080028248 -0.00400000000000002 -0.0833333333333333 0.964122547312195 0.3307607134051 -0.0471005920420435 -1.06796468002957 Q96MH2 HEXIM2 Q96MH2.T32.p_HEXIM2 Q96MH2_S29sT32t_2_2_29_32 Q96MH2 Q96MH2 Protein HEXIM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12118.12118.4 12.4 10.39 3.674 7 2 2 0 747.852 2828.4489 S29s T32t TMT10 23 (K) TSGAPGsPQtPPERHDSGGSLPLTPR (M) T(0.0)S(0.0)GAPGS(0.99)PQT(0.99)PPERHDS(0.0)GGS(0.0)LPLT(0.0)PR s:Phosphorylated S,t:Phosphorylated T HEXIM2 32760.3 5 15 1285.1 158.28 HUMAN 1 -0.1587 -4.8049 GAPPEMPSPQELEAS-p Q9BVN2;S831-p GAPPEMPSPQELEAS 0.334814298446208 0.185089507615276 0.259 -0.172666666666667 8.86989592151163 9.63273211089169 0.259 -0.172666666666667 0.129721035820266 0.108824527179184 1.78584143079959 -1.91722453584317 Q9BVN2 RUSC1 Q9BVN2.S831.p_RUSC1 Q9BVN2_S831s _1_1_831_831 Q9BVN2 Q9BVN2 RUN and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17150.17150.3 10.87 10.87 7.91 2 1 1 0 777.0464 2249.1546 S831s TMT10 823 (K) RGAPPEMPsPQELEASAPR (M) RGAPPEMPS(0.99)PQELEAS(0.0)APR s:Phosphorylated S RUSC1 97412.4 1 3 4779.1 26.77 HUMAN 1 8.8699 -9.6327 GAPRRRGSMPVPYKH-p Q8IYK8;S68-p GAPRRRGSMPVPYKH 0.904981207541703 0.270528732656858 0.0183333333333333 0.125333333333333 0.853354169837695 7.47589763528114 0.0183333333333333 0.125333333333333 0.821607855615216 0.178817589612089 0.236678245326626 1.54362999739579 Q8IYK8 REM2 Q8IYK8.S68.p_REM2 Q8IYK8_S68s _1_1_68_68 Q8IYK8 Q8IYK8|Q8IYK8-2 GTP-binding protein REM 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10023.10023.2 9.8 9.8 9.801 2 1 1 0 672.3422 1263.7081 S68s Hydrogen 66 (R) RGsMPVPYK (H) RGS(0.99)MPVPY(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S REM2 37366.3 8 4 2367.1 86.43 HUMAN 1 0.8534 7.4759 GAPVNISSSDLTGRQ-p P48730-2;S383-p GAPVNISSSDLTGRQ 0.560899556742354 0.0526158825518195 0.105 0.233333333333333 4.62409372051969 17.0624578726066 0.105 0.233333333333333 0.344818555306132 0.0196677288726307 1.03469773686835 3.27244152607131 P48730 CSNK1D P48730.2.S383.p_CSNK1D P48730-2_S382sS383s_2_2_382_383 P48730-2 H7BYT1|P48730|P48730-2 Isoform 2 of Casein kinase I isoform delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19064.19064.2 9.86 9.86 1.166 4 2 2 0 881.9016 1602.8649 S382s S383s TMT10 376 (R) GAPVNIssSDLTGR (Q) GAPVNIS(0.99)S(0.99)S(0.0)DLT(0.0)GR s:Phosphorylated S CSNK1D 47116.9 2 14 1498.1 136.39 HUMAN 1 4.6241 17.0625 GAPVPPLT_______-p P35227;T344-p GAPVPPLT_______ 0.830915281508384 0.0255511911338801 -0.0356666666666667 -0.316 1.54786695433704 21.6697525055188 -0.0356666666666667 -0.316 0.700185809163877 0.00680808155286191 -0.406170771335162 -4.24241630460258 P35227 PCGF2 P35227.T344.p_PCGF2 P35227_T344t_1_1_344_344 P35227 P35227 Polycomb group RING finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24648.24648.2 11.97 11.97 11.972 2 1 1 0 753.8784 1425.7973 N336n T344t TMT10 333 (K) MTVnGAPVPPLt (-) MT(0.0)VN(1.0)GAPVPPLT(0.99) n:Deamidated,t:Phosphorylated T PCGF2 38415 3 1 5062.1 23.39 HUMAN 1 -1.5479 -21.6698 GAQARRATLLLPPTL-p Q9C0D0;T39-p GAQARRATLLLPPTL 0.717179227515211 0.0192104793400816 0.0806666666666667 0.331666666666667 2.72382190587301 23.5907321903116 0.0806666666666667 0.331666666666667 0.534094135610473 0.00437448348189876 0.663736624553782 4.69005276081344 Q9C0D0 PHACTR1 Q9C0D0.T39.p_PHACTR1 Q9C0D0_T39t _1_1_39_39 Q9C0D0 Q9C0D0|Q9C0D0-2|Q5R356 Phosphatase and actin regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20004.20023.5 17.68 17.68 9.499 4 1 1 0 655.3576 3192.7837 T39t TMT10 37 (R) RAtLLLPPTLMAASSEDDIDRRPIRR (V) RAT(0.99)LLLPPT(0.0)LMAAS(0.0)S(0.0)EDDIDRRPIRR t:Phosphorylated T PHACTR1 66763.3 2 1 638.1 255.38 HUMAN 1 2.7238 23.5907 GAQCVIASRKMDVLK-p Q16698;S90-p GAQCVIASRKMDVLK 0.59644104274605 0.229357420268204 0.0766666666666667 0.262333333333333 4.14274715418725 8.42484643074652 0.0766666666666667 0.262333333333333 0.385234598264988 0.143719387253489 0.944319370847178 1.70822008759282 Q16698 DECR1 Q16698.S90.p_DECR1 Q16698_S90s _1_1_90_90 Q16698 Q16698|Q16698-2|E5RID6 2,4-dienoyl-CoA reductase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31230.31230.3 7.86 7.86 1.327 5 1 1 0 725.3684 2094.1249 S90s TMT10 74 (K) GMTTLLSSLGAQCVIAsR (K) GMT(0.0)T(0.0)LLS(0.0)S(0.0)LGAQCVIAS(0.99)R C:Carbamidomethylation,s:Phosphorylated S DECR1 36352.3 1 1 7076.1 7.86 HUMAN 1 4.1427 8.4248 GAQDPEKSPDRLKQF-p Q1MSJ5;S459-p GAQDPEKSPDRLKQF 0.297330507583042 0.00336103056796218 -0.199333333333333 -0.706666666666667 9.91295538780484 37.0032996339759 -0.199333333333333 -0.706666666666667 0.102024496746893 0.000199374695264852 -1.9665917220934 -8.86180193681628 Q1MSJ5 CSPP1 Q1MSJ5.S459.p_CSPP1 Q1MSJ5_S459s _1_1_459_459 Q1MSJ5 Q1MSJ5|Q1MSJ5-1|Q1MSJ5-2 Centrosome and spindle pole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10407.10407.3 11.03 6.97 1.534 2 1 1 0 846.1298 2456.4076 S459s TMT10 448 (R) VAASGAQDPEKsPDRLK (Q) VAAS(0.0)GAQDPEKS(0.99)PDRLK K:TMT10,s:Phosphorylated S CSPP1 145804.7 1 3 1677.1 121.74 HUMAN 1 -9.913 -37.0033 GAQERLPTVPLSGMY-p O14562;T215-p GAQERLPTVPLSGMY 0.0668477670009952 0.00453758598240386 -0.487333333333333 -0.755333333333333 25.3237665362231 34.3718714485296 -0.487333333333333 -0.755333333333333 0.00293510300042324 0.000365437284559743 -5.12624703461511 -7.86581682023409 O14562 UBFD1 O14562.T215.p_UBFD1 O14562_T215t _1_1_215_215 O14562 O14562|H3BRL3 Ubiquitin domain-containing protein UBFD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29938.29938.5 7.58 3.15 1.565 4 1 1 0 677.1563 3301.7689 T215t Hydrogen 199 (K) PEDVMPSVKGAQERLPtVPLSGMYNK (S) PEDVMPS(0.0)VKGAQERLPT(0.99)VPLS(0.0)GMY(0.0)NK K:TMT10-Lys-Only,t:Phosphorylated T UBFD1 33495.5 3 2 3260.1 55.68 HUMAN 1 -25.3238 -34.3719 GAQGEGPYSSLVSCR-p P16144;Y1207-p GAQGEGPYSSLVSCR 0.329350427440409 0.946207902390305 0.141 0.0173333333333334 9.01730939366939 0.343470766431704 0.141 0.0173333333333334 0.1253917780305 0.923959474871452 1.81135931129203 0.0999713955372357 P16144 ITGB4 P16144.Y1207.p_ITGB4 P16144_Y1207y _1_1_1207_1207 P16144 P16144|P16144-3|P16144-2|P16144-4 Integrin beta-4 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.18711.18756.3 30.95 30.95 2.636 5 1 1 0 790.688 2290.0794 Y1207y TMT10 1196 (K) VCAYGAQGEGPySSLVSCR (T) VCAY(0.0)GAQGEGPY(0.99)S(0.0)S(0.0)LVS(0.0)CR C:Carbamidomethylation,y:Phosphorylated Y ITGB4 205872.1 4 1 85.1 30.95 HUMAN 1 9.0173 0.3435 GAQGGRPSLIARIPV-p Q9HC52;S332-p GAQGGRPSLIARIPV 0.206669838771857 0.221337543253576 0.245666666666667 -0.128333333333333 13.2404285548795 8.62494343838153 0.245666666666667 -0.128333333333333 0.0474195190125141 0.137247883577272 2.55448247795783 -1.74284045302261 Q9HC52 CBX8 Q9HC52.S332.p_CBX8 Q9HC52_S332s _1_1_332_332 Q9HC52 Q9HC52 Chromobox protein homolog 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10180.10180.3 8.64 8.64 99 1 1 1 0 579.9601 1657.9005 S332s TMT10 323 (R) DMGAQGGRPsLIAR (I) DMGAQGGRPS(1.0)LIAR s:Phosphorylated S CBX8 43509.1 1 6 1574.1 130.51 HUMAN 1 13.2404 -8.6249 GAQGPSGSSEWEDEQ-p O76061;S287-p GAQGPSGSSEWEDEQ 0.63822938487464 0.870508354156803 -0.0686666666666667 0.024 3.63812062035896 0.848986347354166 -0.0686666666666667 0.024 0.432701038938187 0.822434585545288 -0.847291489042283 0.235534381916913 O76061 STC2 O76061.S287.p_STC2 O76061_S287sS288s_2_2_287_288 O76061 O76061 Stanniocalcin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22670.22670.3 23.29 23.29 1.199 6 2 2 0 1043.7657 2969.3598 S287s S288s TMT10 276 (R) VGGLGAQGPSGssEWEDEQSEYSDIR (R) VGGLGAQGPS(0.0)GS(0.99)S(0.99)EWEDEQS(0.0)EY(0.0)S(0.0)DIR s:Phosphorylated S STC2 34103.8 7 3 2226.1 92.72 HUMAN 1 -3.6381 0.849 GAQILLHSHKKDILM-p Q96KP4;S299-p GAQILLHSHKKDILM 0.222958013593343 0.24780114457419 -0.393333333333333 -0.143 12.5320025361952 7.98322759204618 -0.393333333333333 -0.143 0.0558212742932259 0.159102586811378 -2.42706826473121 -1.63173484606215 Q96KP4 CNDP2 Q96KP4.S299.p_CNDP2 Q96KP4_S299s _1_1_299_299 Q96KP4 Q96KP4|Q96KP4-2 Cytosolic non-specific dipeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12948.12948.4 16.51 16.51 99 1 1 1 0 554.075 2133.3111 S299s TMT10 290 (K) DVGAQILLHsHKK (D) DVGAQILLHS(1.0)HKK K:TMT10,s:Phosphorylated S CNDP2 53219.8 1 3 3897.1 41.11 HUMAN 1 -12.532 -7.9832 GAQKPAPSPEPCMPN-p Q9UGR2;S415-p GAQKPAPSPEPCMPN 0.0904989301263926 0.0332491364137189 -0.822666666666667 0.474666666666667 22.1867143355423 19.9305212405104 -0.822666666666667 0.474666666666667 0.00604405720925683 0.0101612672995779 -4.36475719112947 3.86045893963131 Q9UGR2 ZC3H7B Q9UGR2.S415.p_ZC3H7B Q9UGR2_S415s _1_1_415_415 Q9UGR2 Q9UGR2|Q9UGR2-2 Zinc finger CCCH domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27091.27091.3 14.81 14.81 8.485 2 1 1 0 792.0827 2294.2653 S415s TMT10 412 (K) PAPsPEPCMPNTALLIK (N) PAPS(0.99)PEPCMPNT(0.0)ALLIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZC3H7B 113458.7 2 3 3143.1 59.44 HUMAN 1 -22.1867 19.9305 GAQPGRHSVTGYGDC-p Q96IF1;S263-p GAQPGRHSVTGYGDC 0.522338757345402 0.716054394481659 0.089 0.0363333333333334 5.21513336523825 1.99431558194022 0.089 0.0363333333333334 0.300944675191596 0.631783736188828 1.14334027450348 0.507483957463003 Q96IF1 AJUBA Q96IF1.S263.p_AJUBA Q96IF1_S263s _1_1_263_263 Q96IF1 Q96IF1 LIM domain-containing protein ajuba HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5491.5491.3 13.39 13.39 2.247 3 1 1 0 775.6971 2245.1094 S263s TMT10 256 (R) GAQPGRHsVTGYGDCAVGAR (Y) GAQPGRHS(0.99)VT(0.0)GY(0.0)GDCAVGAR C:Carbamidomethylation,s:Phosphorylated S AJUBA 58758.7 7 7 1286.1 158.19 HUMAN 1 5.2151 1.9943 GAQVRVLSAPPHFHF-p P26641-2;S83-p GAQVRVLSAPPHFHF 0.326502819643871 0.0107746072311629 -0.170666666666667 -0.701666666666667 9.1040611183375 27.5793830253094 -0.170666666666667 -0.701666666666667 0.122911887552727 0.00174607018844515 -1.8263779915328 -5.72002423565138 P26641 EEF1G P26641.2.S83.p_EEF1G P26641-2_S83s _1_1_83_83 P26641-2 P26641-2 Isoform 2 of Elongation factor 1-gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20165.20165.5 16.06 16.06 1.247 3 1 1 0 552.8852 2680.431 S83s TMT10 81 (R) VLsAPPHFHFGQTNRTPEFLR (K) VLS(0.99)APPHFHFGQT(0.0)NRT(0.0)PEFLR s:Phosphorylated S EEF1G 56491.1 1 1 2076.1 98.89 HUMAN 1 -9.1041 -27.5794 GAQYAAASPAWAAAQ-p Q8NFD5-3;S487-p GAQYAAASPAWAAAQ 0.960420214725763 0.806189485694931 0.00766666666666666 0.031 0.337154270197822 1.30970886800148 0.00766666666666667 0.0310000000000001 0.925304284211351 0.739654856618246 0.0982056058347679 0.349821602249045 Q8NFD5 ARID1B Q8NFD5.3.S487.p_ARID1B Q8NFD5-3_S487s _1_1_487_487 Q8NFD5-3 Q8NFD5-3|Q8NFD5-2 Isoform 3 of AT-rich interactive domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17168.17168.3 21.98 21.98 9.14 2 1 1 0 758.3513 2193.0709 S487s TMT10 478 (K) DMGAQYAAAsPAWAAAQQR (S) DMGAQY(0.0)AAAS(0.99)PAWAAAQQR s:Phosphorylated S ARID1B 242543.1 1 3 656.1 253.59 HUMAN 1 0.3372 1.3097 GARASPATQPPPLLP-p Q07666;T61-p GARASPATQPPPLLP 0.860469491288122 0.0332986058440988 0.0293333333333333 -0.762666666666667 1.27511139563002 19.9187214673555 0.0293333333333333 -0.762666666666667 0.745570748048126 0.0101889129839342 0.34153145377806 -3.85793747686532 Q07666 KHDRBS1 Q07666.T61.p_KHDRBS1 Q07666_T61t _1_1_61_61 Q07666 Q07666|Q07666-3 KH domain-containing, RNA-binding, signal transduction-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31129.31129.4 11.97 8.39 1.236 9 1 1 0 1009.7898 3956.1582 T61t Hydrogen 57 (R) ASPAtQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVK (M) AS(0.0)PAT(0.99)QPPPLLPPS(0.0)AT(0.0)GPDAT(0.0)VGGPAPT(0.0)PLLPPS(0.0)AT(0.0)AS(0.0)VK K:TMT10-Lys-Only,t:Phosphorylated T KHDRBS1 48340.6 1 5 1739.1 118.29 HUMAN 1 1.2751 -19.9187 GARDRVRSMSGGHGL-p P49815-4;S1130-p GARDRVRSMSGGHGL 0.729784864244605 0.659888723915502 -0.0483333333333333 -0.100333333333333 2.59460838487126 2.46997391523673 -0.0483333333333333 -0.100333333333333 0.550223533424101 0.566242690016802 -0.636797366033418 -0.610459772927116 P49815 TSC2 P49815.4.S1130.p_TSC2 P49815-4_S1130s _1_1_1130_1130 P49815-4 P49815|P49815-4|P49815-2|P49815-3|H3BMQ0|P49815-5 Isoform 4 of Tuberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19848.19848.4 7.96 3.7 1.327 4 1 1 0 801.9062 3124.6456 S1130s TMT10 1112 (K) LESQAGQQVSRGARDRVRsMSGGHGLR (V) LES(0.0)QAGQQVS(0.0)RGARDRVRS(0.99)MS(0.0)GGHGLR s:Phosphorylated S TSC2 200147.7 3 10 214.1 435.34 HUMAN 1 -2.5946 -2.47 GARERALSPGLEESG-p O15417;S1857-p GARERALSPGLEESG 0.748014976697906 0.452938078784732 0.048 0.0726666666666667 2.39637473136491 4.58347551804884 0.048 0.0726666666666667 0.575920485762373 0.348058663479965 0.594896705704904 1.02694980496474 O15417 TNRC18 O15417.S1857.p_TNRC18 O15417_S1857s _1_1_1857_1857 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29450.29450.3 22.51 22.51 5.986 2 1 1 0 631.3412 1812.0428 S1857s TMT10 1855 (R) ALsPGLEESGLGLLAR (F) ALS(0.99)PGLEES(0.0)GLGLLAR s:Phosphorylated S TNRC18 316168 7 15 75.1 647.68 HUMAN 1 2.3964 4.5835 GARKKRRSPPRKREE-p Q86UE4;S84-p GARKKRRSPPRKREE 0.506520727045966 0.220300797969339 0.0913333333333333 -0.229333333333333 5.45155889841485 8.64912438799816 0.0913333333333334 -0.229333333333333 0.2849995079213 0.136485828763975 1.18620279695295 -1.7470233721227 Q86UE4 MTDH Q86UE4.S84.p_MTDH Q86UE4_S84s _1_1_84_84 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18094.18094.4 16.28 16.64 99 1 1 1 0 756.9229 2944.6984 S84s Hydrogen 84 (R) sPPRKREEAAAVPAAAPDDLALLK (N) S(1.0)PPRKREEAAAVPAAAPDDLALLK K:TMT10-Lys-Only,s:Phosphorylated S MTDH 63892.9 2 2 77.1 644.48 HUMAN 1 5.4516 -8.6491 GARKRRLSSTSLASG-p B4DTS2;S197-p GARKRRLSSTSLASG 0.523422472937247 0.0752096229677673 -0.0886666666666667 0.247333333333333 5.20051188208345 14.9145643587177 -0.0886666666666667 0.247333333333333 0.301959579414804 0.0322510281351648 -1.14067922844846 2.86058932769772 B4DTS2 NotFound B4DTS2.S197.p_NotFound B4DTS2_S197s _1_1_197_197 B4DTS2 B4DTS2|Q9BZL6|Q9BZL6-2 Serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.6749.6749.3 11.87 11.87 1.162 6 1 1 0 589.6418 1686.9448 S197s TMT10 195 (R) RLsSTSLASGHSVR (L) RLS(0.99)S(0.0)T(0.0)S(0.0)LAS(0.0)GHS(0.0)VR s:Phosphorylated S PRKD2 99053.8 7 1 1565.2 131.21 HUMAN 1 -5.2005 14.9146 GARRLKLSPLRSLRK-p Q7L5A3;S319-p GARRLKLSPLRSLRK 0.761206799977109 0.859610163387837 0.046 0.0236666666666667 2.27375982212642 0.925251335407412 0.046 0.0236666666666667 0.592412232855021 0.808118160251134 0.568609428994913 0.254997093206596 Q7L5A3 FAM214B Q7L5A3.S319.p_FAM214B Q7L5A3_S319s _1_1_319_319 Q7L5A3 Q7L5A3|Q7L5A3-2|Q7L5A3-3 Protein FAM214B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17429.17429.3 7.47 7.47 99 1 1 1 0 455.6195 1284.8768 S319s TMT10 316 (R) LKLsPLR (S) LKLS(1.0)PLR K:TMT10,s:Phosphorylated S FAM214B 57088.4 1 2 5165.1 22.26 HUMAN 1 2.2738 0.9253 GARVGHRSLMRYYKQ-p Q969S3;S395-p GARVGHRSLMRYYKQ 0.00874686268802314 0.00700007098176202 1.20266666666667 1.36166666666667 50.7364622508084 30.8850093095637 1.20266666666667 1.36166666666667 8.44022015486753e-06 0.000815641038717669 16.2512763785583 6.69494832590508 Q969S3 ZNF622 Q969S3.S395.p_ZNF622 Q969S3_S395s _1_1_395_395 Q969S3 Q969S3 Zinc finger protein 622 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.4098.4098.3 9.4 9.4 99 1 1 1 0 422.2226 1184.6884 S395s TMT10 391 (R) VGHRsLMR (Y) VGHRS(1.0)LMR s:Phosphorylated S ZNF622 54841.6 1 3 3697.1 45.06 HUMAN 1 50.7365 30.885 GARVVAVSRTQADLD-p Q7Z4W1;S38-p GARVVAVSRTQADLD 0.506609842161293 0.480778077172987 0.125 0.077 5.44433483071347 4.24471516649133 0.125 0.077 0.28547397147754 0.376295030895683 1.18489757964175 0.963456931984047 Q7Z4W1 DCXR Q7Z4W1.S38.p_DCXR Q7Z4W1_S38s _1_1_38_38 Q7Z4W1 Q7Z4W1 L-xylulose reductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22403.22403.3 15.24 14.49 1.1 3 1 1 0 680.0343 1958.1232 S38s TMT10 34 (R) VVAVsRTQADLDSLVR (E) VVAVS(0.99)RT(0.0)QADLDS(0.0)LVR s:Phosphorylated S DCXR 26197.9 2 1 4874.1 25.57 HUMAN 1 5.4443 4.2447 GARYNDWSDDDDDSN-p Q9UH62;S61-p GARYNDWSDDDDDSN 0.893977543443334 0.950059028485893 -0.058 -0.0176666666666667 0.950793396708033 0.318802860381871 -0.058 -0.0176666666666666 0.803379342344374 0.929222493132275 -0.261489512752166 -0.0930274892634411 Q9UH62 ARMCX3 Q9UH62.S61.p_ARMCX3 Q9UH62_S61s _1_1_61_61 Q9UH62 Q9UH62 Armadillo repeat-containing X-linked protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13147.13147.2 18.36 18.36 6.048 4 1 1 0 1171.971 2262.9675 S61s TMT10 57 (R) YNDWsDDDDDSNESK (S) Y(0.0)NDWS(0.99)DDDDDS(0.0)NES(0.0)K K:TMT10,s:Phosphorylated S ARMCX3 42842.2 7 2 2535.1 79.58 HUMAN 1 -0.9508 -0.3188 GASAGDYSDAIETLL-p Q8N684-3;S408-p GASAGDYSDAIETLL 0.705319541148296 0.0405842824265403 0.0523333333333333 0.307333333333333 2.85045518731794 18.6582730673352 0.0523333333333333 0.307333333333333 0.518745665955564 0.0136198615625961 0.689870866572708 3.59365543340747 Q8N684 CPSF7 Q8N684.3.S408.p_CPSF7 Q8N684-3_S408s _1_1_408_408 Q8N684-3 Q8N684-3|Q8N684-2 Isoform 3 of Cleavage and polyadenylation specificity factor subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.38163.38163.3 10.96 10.96 1.279 6 1 1 0 992.1964 2894.6127 S408s TMT10 398 (K) AVSGASAGDYsDAIETLLTAIAVIK (Q) AVS(0.0)GAS(0.0)AGDY(0.0)S(0.99)DAIET(0.0)LLT(0.0)AIAVIK K:TMT10,s:Phosphorylated S CPSF7 56545.1 3 6 1653.1 123.34 HUMAN 1 2.8505 18.6583 GASAHDDSLEEKGLF-p Q8IY92;S287-p GASAHDDSLEEKGLF 0.210680162115114 0.00200060414540189 -0.216333333333333 -0.982333333333333 13.0573318963629 42.1744315374176 -0.216333333333333 -0.982333333333333 0.0494614461823182 6.06117532087302e-05 -2.52140297462671 -11.1539816330692 Q8IY92 SLX4 Q8IY92.S287.p_SLX4 Q8IY92_S287s _1_1_287_287 Q8IY92 Q8IY92 Structure-specific endonuclease subunit SLX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8864.8864.3 15.59 15.59 8.552 2 1 1 0 632.6434 1815.9489 S287s TMT10 279 (R) VGASAHDDsLEEK (G) VGAS(0.0)AHDDS(0.99)LEEK K:TMT10,s:Phosphorylated S SLX4 201834.1 1 1 218.1 430.83 HUMAN 1 -13.0573 -42.1744 GASAPPPTPPRPEPK-p Q8N3X1-2;T174-p GASAPPPTPPRPEPK 0.915262614364166 0.364700527803003 0.03 -0.153666666666667 0.753111910112008 5.80673673898063 0.03 -0.153666666666667 0.840792461136284 0.262619110544205 0.210748542995314 -1.24976936177671 Q8N3X1 FNBP4 Q8N3X1.2.T174.p_FNBP4 Q8N3X1-2_T174t _1_1_174_174 Q8N3X1-2 Q8N3X1-2 Isoform 2 of Formin-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37741.37741.5 27.24 27.24 1.232 8 1 1 0 1081.3514 5322.7534 T174t TMT10 134 (K) ETNGNQSTDIDSTLANFLAEIDAITAPQPAAPVGASAPPPtPPRPEPK (E) ET(0.0)NGNQS(0.0)T(0.0)DIDS(0.0)T(0.0)LANFLAEIDAIT(0.0)APQPAAPVGAS(0.0)APPPT(0.99)PPRPEPK K:TMT10,t:Phosphorylated T FNBP4 110905.5 5 3 405.1 325.34 HUMAN 1 0.7531 -5.8067 GASGPGRSPVGQARQ-p Q12774;S983-p GASGPGRSPVGQARQ 0.768226007158334 0.0882363971985032 0.096 -0.241666666666667 2.19482981969411 13.9567316519047 0.0960000000000001 -0.241666666666667 0.603277347165949 0.0402093298341024 0.551528895416584 -2.68337410904691 Q12774 ARHGEF5 Q12774.S983.p_ARHGEF5 Q12774_S983s _1_1_983_983 Q12774 Q12774 Rho guanine nucleotide exchange factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4363.4363.3 14.87 12.28 1.559 4 1 1 0 721.0283 2081.1049 S983s TMT10 971 (R) TTPQQGASGPGRsPVGQAR (Q) T(0.0)T(0.0)PQQGAS(0.0)GPGRS(0.99)PVGQAR s:Phosphorylated S ARHGEF5 177994.4 1 17 487.1 295.28 HUMAN 1 2.1948 -13.9567 GASGRPGSPKMEGTG-p Q15025;S266-p GASGRPGSPKMEGTG 0.815882402475188 0.148531234155039 0.043 -0.287333333333333 1.69619817981779 10.9025644491585 0.043 -0.287333333333333 0.676675078533621 0.0812350692607065 0.440419953945492 -2.1380939393394 Q15025 TNIP1 Q15025.S266.p_TNIP1 Q15025_S266s _1_1_266_266 Q15025 Q15025|Q15025-2|A0A0A0MRZ4|Q15025-3|Q15025-4|Q15025-6|Q15025-5|Q15025-8 TNFAIP3-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4064.4064.3 11.56 6.3 3.986 2 1 1 0 527.6113 1500.8535 S266s TMT10 258 (K) EGASGRPGsPK (M) EGAS(0.0)GRPGS(0.99)PK K:TMT10,s:Phosphorylated S TNIP1 72148.2 8 2 1578.1 130.12 HUMAN 1 1.6962 -10.9026 GASKGGRTPPQQGGR-p Q9Y3X0;T95-p GASKGGRTPPQQGGR 0.14666043453421 0.0083364618978126 0.285666666666667 -0.462666666666667 16.9696135861414 29.5569104518824 0.285666666666667 -0.462666666666667 0.0200927157975336 0.001107411310409 3.25665232973961 -6.28866260080912 Q9Y3X0 CCDC9 Q9Y3X0.T95.p_CCDC9 Q9Y3X0_T95t _1_1_95_95 Q9Y3X0 Q9Y3X0 Coiled-coil domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3282.3282.3 13.21 13.21 99 1 1 1 0 473.9069 1339.7392 T95t TMT10 92 (K) GGRtPPQQGGR (A) GGRT(1.0)PPQQGGR t:Phosphorylated T CCDC9 59816.1 1 3 2003.1 103.17 HUMAN 1 16.9696 -29.5569 GASPAQASPAGTPPG-p J3KQC6;S25-p GASPAQASPAGTPPG 0.326502819643871 0.628997594263498 0.158666666666667 -0.049 9.10322738401323 2.73799824390738 0.158666666666667 -0.049 0.122935485756431 0.532353575868191 1.82623364495498 -0.666586193309677 J3KQC6 NotFound J3KQC6.S25.p_NotFound J3KQC6_S25sT29t_2_2_25_29 J3KQC6 Q9BYE2|J3KQC6|E9PRA0|Q9BYE2-2|Q9BYE2-5|Q9BYE2-3 Transmembrane protease serine 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8436.8436.3 15.78 15.78 3.984 5 2 2 0 722.9981 2007.0457 S25s T29t TMT10 14 (R) TPSAGASPAQAsPAGtPPGR (A) T(0.0)PS(0.0)AGAS(0.0)PAQAS(0.99)PAGT(0.99)PPGR s:Phosphorylated S,t:Phosphorylated T TMPRSS13 64250 1 11 1604.1 128.27 HUMAN 1 9.1032 -2.738 GASQSDKTPEELFHP-p P11166;T478-p GASQSDKTPEELFHP 0.145152146047681 0.221435052354208 -0.264333333333333 -0.132 17.0970345702051 8.62215626759745 -0.264333333333333 -0.132 0.0195117643841242 0.137335993392765 -3.28177108878114 -1.74235830816111 P11166 SLC2A1 P11166.T478.p_SLC2A1 P11166_T478t _1_1_478_478 P11166 P11166 Solute carrier family 2, facilitated glucose transporter member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21572.21572.4 11.48 11.48 2.344 4 1 1 0 759.877 2956.5053 T478t TMT10 469 (R) QGGASQSDKtPEELFHPLGADSQV (-) QGGAS(0.0)QS(0.0)DKT(0.99)PEELFHPLGADS(0.0)QV K:TMT10,t:Phosphorylated T SLC2A1 54425.1 3 2 5439.1 19.28 HUMAN 1 -17.097 -8.6222 GASRFSASSGGGGSR-p P78344;S16-p GASRFSASSGGGGSR 0.236272828105597 0.0101016889752398 -0.210333333333333 -0.469 12.0058586405569 28.0396970092018 -0.210333333333333 -0.469 0.0630106755712705 0.00157047236641581 -2.33337377836463 -5.84868781898666 P78344 EIF4G2 P78344.S16.p_EIF4G2 P78344_S16s _1_1_16_16 P78344 P78344|P78344-2|H0Y3P2|H0YD99 Eukaryotic translation initiation factor 4 gamma 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6463.6463.2 12.35 6.7 1.119 4 1 1 0 639.7874 1198.6014 S16s TMT10 13 (R) FSAsSGGGGSR (G) FS(0.0)AS(0.99)S(0.0)GGGGS(0.0)R s:Phosphorylated S EIF4G2 102873.5 2 1 1107.1 176.26 HUMAN 1 -12.0059 -28.0397 GASSREGSPARSSTP-p O95817;S279-p GASSREGSPARSSTP 0.334850415474178 0.657795418791363 0.433 0.138333333333333 8.86709593326963 2.48772143764719 0.433 0.138333333333333 0.129804696677657 0.563933450628952 1.78535675795523 0.614215492982888 O95817 BAG3 O95817.S279.p_BAG3 O95817_S279s _1_1_279_279 O95817 O95817 BAG family molecular chaperone regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7473.7473.3 15.4 11.2 4.227 6 1 1 0 729.0379 2105.1301 S279s TMT10 277 (R) EGsPARSSTPLHSPSPIR (V) EGS(0.99)PARS(0.0)S(0.0)T(0.0)PLHS(0.0)PS(0.0)PIR s:Phosphorylated S BAG3 61764.7 1 9 416.1 321.05 HUMAN 1 8.8671 2.4877 GATIEELTEF_____-p P18583-6;T2106-p GATIEELTEF_____ 0.461270358005095 0.053692037920112 0.168666666666667 0.671 6.19646495728789 16.9329724674651 0.168666666666667 0.671 0.240078630073557 0.0202629537544679 1.31948767798437 3.24698280345519 P18583 SON P18583.6.T2106.p_SON P18583-6_T2106t _1_1_2106_2106 P18583-6 P18583-6 Isoform E of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25179.25179.3 7.79 7.79 1.318 3 1 1 0 640.6648 1840.0104 T2106t TMT10 2096 (K) KSGGATIEELtEF (-) KS(0.0)GGAT(0.0)IEELT(0.99)EF K:TMT10,t:Phosphorylated T SON 228405.1 1 49 45.3 778.56 HUMAN 1 6.1965 16.933 GATPQVPSPCCRFDS-p Q9H4L4;S181-p GATPQVPSPCCRFDS 0.160078188700121 0.00509455060478819 0.302666666666667 0.542333333333333 15.9224831580372 33.3757053905155 0.302666666666667 0.542333333333333 0.0255712338682997 0.000459652324740139 3.05332034656393 7.51496090598849 Q9H4L4 SENP3 Q9H4L4.S181.p_SENP3 Q9H4L4_S169sS181s_2_2_169_181 Q9H4L4 Q9H4L4|A0A087X0R7 Sentrin-specific protease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11021.11021.4 12.01 12.01 1.222 3 2 2 0 645.7824 2420.1761 S169s S181s TMT10 166 (K) NHLsPQQGGATPQVPsPCCR (F) NHLS(0.99)PQQGGAT(0.0)PQVPS(0.99)PCCR C:Carbamidomethylation,s:Phosphorylated S SENP3 65636.2 6 10 396.1 329.46 HUMAN 1 15.9225 33.3757 GATWGNGSGEEEEEE-p P36915;S324-p GATWGNGSGEEEEEE 0.837059170576877 0.0369832612429549 0.032 0.264333333333333 1.49341314356859 19.2522571788853 0.032 0.264333333333333 0.709020326076186 0.011878846821471 0.393443690938017 3.71696917796508 P36915 GNL1 P36915.S324.p_GNL1 P36915_S324s _1_1_324_324 P36915 P36915|P36915-2 Guanine nucleotide-binding protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26444.26444.3 31.98 24.19 4.673 6 1 1 0 1571.3473 4632.0641 S324s TMT10 314 (R) DVAGATWGNGsGEEEEEEDGPAVLVEQQTDSAMEPTGPTQER (Y) DVAGAT(0.0)WGNGS(0.99)GEEEEEEDGPAVLVEQQT(0.0)DS(0.0)AMEPT(0.0)GPT(0.0)QER s:Phosphorylated S GNL1 69173.1 31 4 1812.1 113.26 HUMAN 1 1.4934 19.2523 GAVAAATS_______-p Q13310-2;S631-p GAVAAATS_______ 0.132277812902063 0.0166076750945612 -0.497666666666667 -0.651 18.1309121663141 24.5770331022523 -0.497666666666667 -0.651 0.0153783160937054 0.00348575364178244 -3.48880796992197 -4.93142402585482 Q13310 PABPC4 Q13310.2.S631.p_PABPC4 Q13310-2_S631s _1_1_631_631 Q13310-2 Q13310-3|Q13310-2|B1ANR0 Isoform 2 of Polyadenylate-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11240.11240.2 11.85 11.85 1.757 2 1 1 0 528.2705 975.5672 S631s TMT10 623 (K) VGAVAAATs (-) VGAVAAAT(0.0)S(0.99) s:Phosphorylated S PABPC4 69805.6 1 12 1996.1 103.46 HUMAN 1 -18.1309 -24.577 GAVECPAS_______-p P30050;S165-p GAVECPAS_______ 0.421536310017279 0.175568134293142 0.165666666666667 0.236 6.91010499741155 9.93587757627789 0.165666666666667 0.236 0.203699282965657 0.1014874270811 1.44526821203511 1.96978150399352 P30050 RPL12 P30050.S165.p_RPL12 P30050_S165s _1_1_165_165 P30050 P30050|P30050-2 60S ribosomal protein L12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22054.22054.4 21.85 21.85 9.426 4 1 1 0 1003.9636 3932.8704 S165s TMT10 131 (K) EILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAs (-) EILGT(0.0)AQS(0.0)VGCNVDGRHPHDIIDDINS(0.0)GAVECPAS(0.99) C:Carbamidomethylation,s:Phosphorylated S RPL12 17989.4 1 5 1867.1 110.2 HUMAN 1 6.9101 9.9359 GAVERPLTPAPRSCI-p O15417;T2146-p GAVERPLTPAPRSCI 0.506410629276423 0.0181749418560776 0.158333333333333 0.573333333333333 5.45491809893011 23.9608636582587 0.158333333333333 0.573333333333333 0.284779150451067 0.00401710916798985 1.18680963223518 4.77967396417947 O15417 TNRC18 O15417.T2146.p_TNRC18 O15417_T2146t _1_1_2146_2146 O15417 O15417|H9KVB4 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7010.7010.3 12 12 99 1 1 1 0 543.9606 1549.9012 T2146t TMT10 2138 (R) GGAVERPLtPAPR (S) GGAVERPLT(1.0)PAPR t:Phosphorylated T TNRC18 316168 6 23 75.1 647.68 HUMAN 1 5.4549 23.9609 GAVIRQNSDPTSEGP-p Q8N4C8;S641-p GAVIRQNSDPTSEGP 0.373935912464191 0.0714251631959645 0.138666666666667 0.210333333333333 7.90988491484191 15.2367501588297 0.138666666666667 0.210333333333333 0.161812291625931 0.0299450459693867 1.61952407183897 2.92102982070523 Q8N4C8 MINK1 Q8N4C8.S641.p_MINK1 Q8N4C8_S641s _1_1_641_641 Q8N4C8 Q8N4C8|Q8N4C8-4|Q8N4C8-3|Q8N4C8-2|Q8N4C8-5 Misshapen-like kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15941.15941.4 29.53 28.45 2.253 4 1 1 0 1015.0038 3977.0306 S641s TMT10 639 (R) QNsDPTSEGPGPSPNPPAWVRPDNEAPPKVPQR (T) QNS(0.99)DPT(0.0)S(0.0)EGPGPS(0.0)PNPPAWVRPDNEAPPKVPQR K:TMT10,s:Phosphorylated S MINK1 150503.5 12 17 131.3 535.29 HUMAN 1 7.9099 15.2368 GAVKDKASPEPEKDF-p Q9ULU4-19;S695-p GAVKDKASPEPEKDF 0.175126391202982 0.256858966719492 0.26 -0.172 15.0655149442166 7.77526791225542 0.26 -0.172 0.0311493153574829 0.166906484096639 2.89074761075845 -1.59565890517561 Q9ULU4 ZMYND8 Q9ULU4.19.S695.p_ZMYND8 Q9ULU4-19_S695s _1_1_695_695 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-10|Q9ULU4-13|Q9ULU4-20|Q9ULU4-5|Q9ULU4-9|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-18|Q9ULU4-21|Q9ULU4-8|Q9ULU4-23|Q9ULU4-15|A0A087WYS3|Q9ULU4-17|Q9ULU4-6|Q9ULU4-3|A0A087WV57|Q9ULU4-4 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11245.11245.3 15.12 7.08 14.369 2 1 1 0 868.4642 2523.4112 S695s TMT10 692 (K) DKAsPEPEKDFSEK (A) DKAS(0.99)PEPEKDFS(0.0)EK K:TMT10,s:Phosphorylated S ZMYND8 139738.7 14 13 57.1 712.18 HUMAN 1 15.0655 -7.7753 GAVLAAVSSHKFNSF-p O14936-3;S313-p GAVLAAVSSHKFNSF 0.286655421160428 0.335572366467552 -0.294666666666667 0.0916666666666667 10.2399230157365 6.28555843816553 -0.294666666666667 0.0916666666666667 0.0946253934780989 0.235203703693308 -2.02342584450542 1.33494628227233 O14936 CASK O14936.3.S313.p_CASK O14936-3_S313s _1_1_313_313 O14936-3 O14936-3 Isoform 3 of Peripheral plasma membrane protein CASK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13289.13289.2 12.9 12.9 1.224 2 1 1 0 789.4451 1497.9153 S313s TMT10 306 (K) GAVLAAVsSHK (F) GAVLAAVS(0.99)S(0.0)HK K:TMT10,s:Phosphorylated S CASK 103024.6 1 4 1824.1 112.53 HUMAN 1 -10.2399 6.2856 GAVLKDFTVSGNLLF-p O75638-2;T127-p GAVLKDFTVSGNLLF 0.534118148817484 0.00829953850919329 -0.0973333333333333 0.44 5.04334065596254 29.5829968957587 -0.0973333333333334 0.44 0.313087648235349 0.00110077944270669 -1.11199462211725 6.29644789307445 O75638 CTAG2 O75638.2.T127.p_CTAG2 O75638-2_T127tS129s_2_2_127_129 O75638-2 O75638-2 Isoform LAGE-1A of Cancer/testis antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32359.32559.4 7.05 5.17 6.828 3 2 2 0 939.5154 3595.1252 T127t S129s TMT10 108 (R) ILSRDAAPLPRPGAVLKDFtVsGNLLFIR (L) ILS(0.0)RDAAPLPRPGAVLKDFT(0.99)VS(0.99)GNLLFIR K:TMT10,t:Phosphorylated T,s:Phosphorylated S CTAG2 18464.5 2 1 7277.1 7.05 HUMAN 1 -5.0433 29.583 GAVNKPLSSAGKQSQ-p Q9NTI5;S1139-p GAVNKPLSSAGKQSQ 0.127652091791245 0.00315537063565764 -0.296 -0.848 18.5233630311889 37.5433845473296 -0.296 -0.848 0.0140495914941679 0.000176060343671059 -3.56896920221493 -9.07945209028016 Q9NTI5 PDS5B Q9NTI5.S1139.p_PDS5B Q9NTI5_S1139s _1_1_1139_1139 Q9NTI5 Q9NTI5|Q9NTI5-2 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18868.18868.3 18.11 18.11 1.131 4 1 1 0 808.8008 2344.4167 S1139s TMT10 1127 (K) TTNVLGAVNKPLsSAGK (Q) T(0.0)T(0.0)NVLGAVNKPLS(0.99)S(0.0)AGK K:TMT10,s:Phosphorylated S PDS5B 165919.5 3 2 100.1 597.99 HUMAN 1 -18.5234 -37.5434 GAVPDDPSPVPHPEL-p Q96N64;S244-p GAVPDDPSPVPHPEL 0.908569951975086 0.0309281815065414 -0.0383333333333333 0.395666666666667 0.818882879850237 20.4027677238848 -0.0383333333333333 0.395666666666667 0.828155159704322 0.00911429807329284 -0.22780900033063 3.9621235932725 Q96N64 PWWP2A Q96N64.S244.p_PWWP2A Q96N64_S244s_1_1_244_244 Q96N64 Q96N64|Q96N64-2|Q96N64-3 PWWP domain-containing protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35598.35598.5 8.58 8.58 8.581 6 1 1 0 1134.5833 5587.8765 N236n S244s TMT10 233 (K) CEAnGAVPDDPsPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIR (D) CEAN(1.0)GAVPDDPS(0.99)PVPHPELS(0.0)LAES(0.0)LWT(0.0)S(0.0)KPPPLFHEGAPY(0.0)PPPLFIR C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S PWWP2A 82415.3 1 2 1984.1 104.07 HUMAN 1 -0.8189 20.4028 GAVVGGGSPRGRPGP-p Q10586;S86-p GAVVGGGSPRGRPGP 0.175562354082335 0.161692560029726 0.218 0.181333333333333 15.0309210858427 10.4052323135671 0.218 0.181333333333333 0.0313984270075681 0.0910912724259186 2.88425246210739 2.05134186663539 Q10586 DBP Q10586.S86.p_DBP Q10586_S86s _1_1_86_86 Q10586 Q10586|M0QXP1 D site-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22425.22425.4 21.81 21.81 3.927 4 1 1 0 791.6558 3083.6323 S86s TMT10 56 (K) AALPAATTPGPGLETAGPADAPAGAVVGGGsPR (G) AALPAAT(0.0)T(0.0)PGPGLET(0.0)AGPADAPAGAVVGGGS(0.99)PR s:Phosphorylated S DBP 34462.4 2 1 3711.1 44.75 HUMAN 1 15.0309 10.4052 GAVYQAPSPPPAPVG-p Q13057-2;S19-p GAVYQAPSPPPAPVG 0.928862324790053 0.625791937774713 0.014 -0.0506666666666667 0.635804718185964 2.77045091542819 0.014 -0.0506666666666667 0.86381258724754 0.528390387677854 0.179851279135379 -0.673299339325144 Q13057 COASY Q13057.2.S19.p_COASY Q13057-2_S19s _1_1_19_19 Q13057-2 Q13057-2 Isoform 2 of Bifunctional coenzyme A synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29873.29873.4 23.42 23.42 8.661 3 1 1 0 645.3333 2498.3427 S19s TMT10 12 (R) GAVYQAPsPPPAPVGLGSMAVFR (S) GAVY(0.0)QAPS(0.99)PPPAPVGLGS(0.0)MAVFR s:Phosphorylated S COASY 65680.5 6 1 1348.1 151.04 HUMAN 1 0.6358 -2.7705 GAWELPGTPRKAPLL-p Q8WUA4;T486-p GAWELPGTPRKAPLL 0.794635258595405 0.134204710063191 -0.0483333333333333 0.154666666666667 1.92775583937767 11.4954054188581 -0.0483333333333333 0.154666666666667 0.641540998970874 0.0708695145862013 -0.49274294101149 2.24207592168862 Q8WUA4 GTF3C2 Q8WUA4.T486.p_GTF3C2 Q8WUA4_T486t _1_1_486_486 Q8WUA4 Q8WUA4|Q8WUA4-2|A0A087WZD8 General transcription factor 3C polypeptide 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24744.24744.3 18.92 18.92 10.64 2 1 1 0 628.6297 1803.905 T486t TMT10 475 (K) FCPSGAWELPGtPR (K) FCPS(0.0)GAWELPGT(0.99)PR C:Carbamidomethylation,t:Phosphorylated T GTF3C2 101761.7 2 6 753.1 231.45 HUMAN 1 -1.9278 11.4954 GAWGSAASLGRGPQG-p Q5FWE3;S777-p GAWGSAASLGRGPQG 0.957246455101486 0.452734613054459 0.00899999999999999 -0.0796666666666666 0.369445137433395 4.58611034787533 0.00899999999999999 -0.0796666666666666 0.918449931829646 0.347847563120365 0.107256579243816 -1.027440065465 Q5FWE3 PRRT3 Q5FWE3.S777.p_PRRT3 Q5FWE3_S774sS777s_2_2_774_777 Q5FWE3 Q5FWE3|Q5FWE3-2 Proline-rich transmembrane protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21679.21679.4 8.71 5.76 1.117 8 2 2 0 1009.9919 3877.0266 S774s S777s TMT10 753 (K) SLIRNPAESGQLATPSSGAWGsAAsLGRGPQGGPGLSR (N) S(0.0)LIRNPAES(0.0)GQLAT(0.0)PS(0.0)S(0.0)GAWGS(0.99)AAS(0.99)LGRGPQGGPGLS(0.0)R s:Phosphorylated S PRRT3 102765.9 2 11 931.1 199.28 HUMAN 1 0.3694 -4.5861 GAYGASVSDEELKRR-p F8WAR4;S58-p GAYGASVSDEELKRR 0.978101918285191 0.390140314400169 0.00433333333333333 -0.0986666666666667 0.189869525544761 5.43579643173486 0.00433333333333334 -0.0986666666666667 0.957222828568135 0.2860357765292 0.0561690507944212 -1.18309738482049 F8WAR4 NotFound F8WAR4.S58.p_NotFound F8WAR4_S58s _1_1_58_58 F8WAR4 F8WAR4|C9JRZ6|Q9NX63 MICOS complex subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16825.16825.3 13.01 13.01 1.643 5 1 1 0 705.3426 2034.0432 S58s TMT10 49 (R) YSGAYGASVsDEELK (R) Y(0.0)S(0.0)GAY(0.0)GAS(0.0)VS(0.99)DEELK K:TMT10,s:Phosphorylated S CHCHD3 27848.9 1 4 2722.1 72.89 HUMAN 1 0.1899 -5.4358 GAYLTEGSNGEVDIS-p Q9Y5T5;S566-p GAYLTEGSNGEVDIS 0.816932996261526 0.897116264488935 0.0336666666666667 -0.0143333333333333 1.68725889905426 0.661205041696198 0.0336666666666667 -0.0143333333333333 0.678069344059115 0.858775203139468 0.438372723921956 -0.186576283134826 Q9Y5T5 USP16 Q9Y5T5.S566.p_USP16 Q9Y5T5_S566s_1_1_566_566 Q9Y5T5 Q9Y5T5|Q9Y5T5-2|Q9Y5T5-3|Q9Y5T5-4 Ubiquitin carboxyl-terminal hydrolase 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24700.24700.3 19.49 19.43 2.603 4 1 1 0 946.7916 2757.4096 S566s N567n TMT10 556 (R) NLNGAYLTEGsnGEVDISNGFK (N) N(0.0)LN(0.0)GAY(0.0)LT(0.0)EGS(0.99)N(0.99)GEVDIS(0.0)N(0.0)GFK K:TMT10,s:Phosphorylated S,n:Deamidated USP16 94994.9 3 5 1229.1 164.17 HUMAN 1 1.6873 -0.6612 GCCGTKKSC______-p Q9HBK9;S374-p GCCGTKKSC______ 0.518846820664332 0.148427198719736 0.101666666666667 -0.255666666666667 5.26445844193083 10.9077539137234 0.105834369557166 -0.255666666666667 0.297546027074539 0.0811380579556086 1.15230816208742 -2.13900127674788 Q9HBK9 AS3MT Q9HBK9.S374.p_AS3MT Q9HBK9_S374s _1_1_374_374 Q9HBK9 Q9HBK9|Q9HBK9-2 Arsenite methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9487.9487.3 10.34 10.34 1.14 2 1 1 0 832.3884 2415.1856 S374s TMT10 360 (R) CVPDAAGGCCGTKKsC (-) CVPDAAGGCCGT(0.0)KKS(0.99)C C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AS3MT 42545.8 1 2 4583.1 29.27 HUMAN 1 5.2645 -10.9078 GCDFLTISPKLLGEL-p P37837;S256-p GCDFLTISPKLLGEL 0.850252688548194 0.0757387426717088 -0.032 0.250666666666667 1.36401221291666 14.8752754590465 -0.032 0.250666666666667 0.730463935359448 0.0325441141156683 -0.362849478754973 2.85324864751498 P37837 TALDO1 P37837.S256.p_TALDO1 P37837_S256s _1_1_256_256 P37837 P37837|F2Z393 Transaldolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27364.27364.2 15.34 11.88 1.109 2 1 1 0 966.0098 1851.045 S256s TMT10 246 (K) ALAGCDFLTIsPK (L) ALAGCDFLT(0.0)IS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TALDO1 37710.6 2 4 2744.1 72.02 HUMAN 1 -1.364 14.8753 GCEPQSASPQSKEQQ-p Q9HCK0;S145-p GCEPQSASPQSKEQQ 0.393541686730259 0.0523769786886803 0.134666666666667 0.228333333333333 7.47218746674993 17.0906893871128 0.134666666666667 0.228333333333333 0.178970418370298 0.0195402925392765 1.54343987354242 3.27800376495309 Q9HCK0 ZBTB26 Q9HCK0.S145.p_ZBTB26 Q9HCK0_S145s _1_1_145_145 Q9HCK0 Q9HCK0 Zinc finger and BTB domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8521.8521.4 17.98 16.61 1.123 4 1 1 0 715.3486 2778.4005 S145s TMT10 131 (K) QPMDSKEGCEPQSAsPQSK (E) QPMDS(0.0)KEGCEPQS(0.0)AS(0.99)PQS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZBTB26 50921.7 3 1 4078.1 38.04 HUMAN 1 7.4722 17.0907 GCFPEGRSPPGAAAS-p Q7Z5L9;S71-p GCFPEGRSPPGAAAS 0.487530750090205 0.695420561695074 -0.116666666666667 0.0376666666666667 5.75039174748621 2.16765495625674 -0.116666666666667 0.0376666666666667 0.266048506472918 0.60706403521228 -1.23996745782012 0.54555309429848 Q7Z5L9 IRF2BP2 Q7Z5L9.S71.p_IRF2BP2 Q7Z5L9_S71s _1_1_71_71 Q7Z5L9 Q7Z5L9|Q7Z5L9-2 Interferon regulatory factor 2-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12899.12899.5 23.67 23.67 8.185 3 1 1 0 648.5381 3158.6933 S71s Hydrogen 62 (R) AHGCFPEGRsPPGAAASAAAKPPPLSAK (D) AHGCFPEGRS(0.99)PPGAAAS(0.0)AAAKPPPLS(0.0)AK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S IRF2BP2 61765.3 11 1 154.1 504.92 HUMAN 1 -5.7504 2.1677 GCFQDGRSPGPPPPV-p Q9H1B7;S69-p GCFQDGRSPGPPPPV 0.93931869762336 0.994787146534929 -0.0116666666666667 -0.000666666666666649 0.530671021362657 0.031765154071297 -0.0116666666666667 -0.000666666666666649 0.884978862617589 0.992712486618823 -0.151620401743733 -0.00956229572213204 Q9H1B7 IRF2BPL Q9H1B7.S69.p_IRF2BPL Q9H1B7_S69s _1_1_69_69 Q9H1B7 Q9H1B7 Interferon regulatory factor 2-binding protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8922.8922.4 19.3 17.04 99 1 1 1 0 593.0416 2289.176 S69s Hydrogen 60 (R) AHGCFQDGRsPGPPPPVGVK (T) AHGCFQDGRS(1.0)PGPPPPVGVK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S IRF2BPL 83627.3 9 1 282.1 386.92 HUMAN 1 -0.5307 -0.0318 GCGKHFASPSKLKRH-p Q92664;S175-p GCGKHFASPSKLKRH 0.96605200061108 0.0010340752520887 -0.00666666666666667 -1.48433333333333 0.289557028531984 51.2792428046908 -0.00666666666666668 -1.48433333333333 0.935501088474578 7.44861829739397e-06 -0.084758341464934 -16.5844798347549 Q92664 GTF3A Q92664.S175.p_GTF3A Q92664_S175s _1_1_175_175 Q92664 Q92664|A0A1X7SBT5 Transcription factor IIIA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7733.7733.3 10.65 8.09 4.044 2 1 1 0 437.8987 1231.7199 S175s TMT10 172 (K) HFAsPSK (L) HFAS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S GTF3A 42826.4 3 2 2798.1 70.17 HUMAN 1 -0.2896 -51.2792 GCIFRKASEPCGPPA-p Q5GH72;S459-p GCIFRKASEPCGPPA 0.486932192244721 0.283761019953132 0.121333333333333 0.115666666666667 5.75776387532585 7.21361895679066 0.121333333333333 0.115666666666667 0.265597273510306 0.189949477961885 1.24128847225264 1.49793012652984 Q5GH72 XKR7 Q5GH72.S459.p_XKR7 Q5GH72_S459s _1_1_459_459 Q5GH72 Q5GH72 XK-related protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12250.12250.3 14.07 14.07 7.304 3 1 1 0 797.0712 2309.2324 S459s TMT10 457 (R) KAsEPCGPPADAITSPPR (S) KAS(0.99)EPCGPPADAIT(0.0)S(0.0)PPR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S XKR7 64680.4 1 1 4701.1 27.76 HUMAN 1 5.7578 7.2136 GCKNFEESPERKTLM-p Q6MZP7;S635-p GCKNFEESPERKTLM 0.765963295929894 0.867754812451731 0.051 0.0213333333333334 2.22298739724298 0.866956163057826 0.051 0.0213333333333334 0.599378637656216 0.819038626093689 0.557636871505402 0.240141308214458 Q6MZP7 LIN54 Q6MZP7.S635.p_LIN54 Q6MZP7_S635s _1_1_635_635 Q6MZP7 Q6MZP7|Q6MZP7-2|Q6MZP7-3|Q6MZP7-4 Protein lin-54 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7855.7855.2 11.17 11.17 99 1 1 1 0 837.4186 1593.8637 S635s TMT10 631 (K) NFEEsPERK (T) NFEES(1.0)PERK K:TMT10,s:Phosphorylated S LIN54 80862.1 3 8 2171.1 94.63 HUMAN 1 2.223 0.867 GCKVDNSSLTGESEP-p P05023-4;S217-p GCKVDNSSLTGESEP 0.341848649788872 0.0653471268018565 0.146 0.353 8.66400798159714 15.7650458454475 0.146 0.353 0.136018882305665 0.0265152310257647 1.75020177843766 3.02110953452103 P05023 ATP1A1 P05023.4.S217.p_ATP1A1 P05023-4_S217s _1_1_217_217 P05023-4 P05023|P05023-4|P05023-3|P05023-2 Isoform 4 of Sodium/potassium-transporting ATPase subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14494.14494.3 17.39 14.35 1.101 6 1 1 0 1001.1615 2921.5039 S217s TMT10 205 (R) IISANGCKVDNSsLTGESEPQTR (S) IIS(0.0)ANGCKVDNS(0.0)S(0.99)LT(0.0)GES(0.0)EPQT(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATP1A1 114310.4 3 4 1313.1 155.17 HUMAN 1 8.664 15.765 GCLAGGGSPKQPFAA-p Q9H257;S460-p GCLAGGGSPKQPFAA 0.269424134699647 0.289398336280437 -0.251 0.154333333333333 10.7945957325482 7.10475934675607 -0.251 0.154333333333333 0.0832799444363661 0.19477089742924 -2.12016185514275 1.4789238702381 Q9H257 CARD9 Q9H257.S460.p_CARD9 Q9H257_S460s _1_1_460_460 Q9H257 Q9H257|Q9H257-2 Caspase recruitment domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8477.8477.2 12.44 6.75 99 1 1 1 0 721.3666 1361.7611 S460s TMT10 453 (K) GCLAGGGsPK (Q) GCLAGGGS(1.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CARD9 62753 3 3 3289.1 54.86 HUMAN 1 -10.7946 7.1048 GCLESGGSEEPGGIG-p Q9C0C2;S1214-p GCLESGGSEEPGGIG 0.97105532437651 0.426456511913706 -0.00566666666666667 -0.081 0.25039311290717 4.92678786654749 -0.00566666666666667 -0.081 0.943975426036143 0.321603830887189 -0.0735965238985408 -1.09040670418322 Q9C0C2 TNKS1BP1 Q9C0C2.S1214.p_TNKS1BP1 Q9C0C2_S1211sS1214s_2_2_1211_1214 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25844.25844.3 17.65 17.65 6.123 3 2 2 0 1004.4492 2851.3854 S1211s S1214s TMT10 1202 (R) DMNLTGCLEsGGsEEPGGIGVGEK (D) DMNLT(0.0)GCLES(0.99)GGS(0.99)EEPGGIGVGEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 1 83 4.1 2105.7 HUMAN 1 -0.2504 -4.9268 GCLTTPNSPSMHSRS-p O75128;S269-p GCLTTPNSPSMHSRS 0.223329192805893 0.239981607404973 0.245666666666667 -0.221333333333333 12.5132127466455 8.16683969297929 0.245666666666667 -0.221333333333333 0.0560633087395877 0.152516219167598 2.42370919595792 -1.66355214172205 O75128 COBL O75128.S269.p_COBL O75128_S269s _1_1_269_269 O75128 O75128-7|O75128-3|O75128-4|A0A0J9YWK3|O75128-5 Protein cordon-bleu HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7324.7324.3 17.46 17.46 2.133 5 1 1 0 618.6128 1773.8574 S269s TMT10 262 (K) GCLTTPNsPSMHSR (S) GCLT(0.0)T(0.0)PNS(0.99)PS(0.0)MHS(0.0)R C:Carbamidomethylation,s:Phosphorylated S COBL 136527.2 5 1 254.2 405.31 HUMAN 1 12.5132 -8.1668 GCQESRHSYPPALGS-p Q96IF1;S230-p GCQESRHSYPPALGS 0.216110872870992 0.797212110469579 0.198 0.0276666666666667 12.8231107379203 1.37549251246536 0.198 0.0276666666666667 0.0522022144231071 0.728535550118668 2.47924075001044 0.365546205667687 Q96IF1 AJUBA Q96IF1.S230.p_AJUBA Q96IF1_S230s _1_1_230_230 Q96IF1 Q96IF1 LIM domain-containing protein ajuba HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19941.20146.3 20.59 18.75 2.281 3 1 1 0 818.4039 2373.231 S230s Hydrogen 229 (R) HsYPPALGSPGALAGAGVGAAGPLER (R) HS(0.99)Y(0.0)PPALGS(0.0)PGALAGAGVGAAGPLER s:Phosphorylated S AJUBA 58758.7 8 6 1286.1 158.19 HUMAN 1 12.8231 1.3755 GCRRRHSSETFSSTP-p P35568;S1101-p GCRRRHSSETFSSTP 0.167358074912122 0.0281356011700872 0.247333333333333 -0.408 15.5194597632602 21.0140433187758 0.247333333333333 -0.408 0.028057826390685 0.00791763848317158 2.97645594324353 -4.09595087226863 P35568 IRS1 P35568.S1101.p_IRS1 P35568_S1101s _1_1_1101_1101 P35568 P35568 Insulin receptor substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5752.5752.2 12.55 12.55 1.122 8 1 1 0 902.4098 1723.8449 S1101s TMT10 1099 (R) HSsETFSSTPSATR (V) HS(0.0)S(0.99)ET(0.0)FS(0.0)S(0.0)T(0.0)PS(0.0)AT(0.0)R s:Phosphorylated S IRS1 132786.8 4 18 229.1 423.14 HUMAN 1 15.5195 -21.014 GCSITNKSHSDIVNL-p Q96QZ7;S1071-p GCSITNKSHSDIVNL 0.561789874003014 0.00239575414632687 -0.098 0.746666666666667 4.6098363815896 40.1947484179151 -0.098 0.748521882373409 0.345952411175541 9.56148082037316e-05 -1.03204735143718 10.2193071723463 Q96QZ7 MAGI1 Q96QZ7.S1071.p_MAGI1 Q96QZ7_S1071s _1_1_1071_1071 Q96QZ7 Q96QZ7|Q96QZ7-2|Q96QZ7-6|Q96QZ7-5|Q96QZ7-3|A0A087WT53|A0A087WXD2 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19783.19783.2 16.18 16.18 3.362 2 1 1 0 832.4632 1583.9521 S1071s TMT10 1071 (K) sHSDIVNLIK (E) S(0.99)HS(0.0)DIVNLIK K:TMT10,s:Phosphorylated S MAGI1 165548 4 5 1223.1 164.72 HUMAN 1 -4.6098 40.1947 GCVDPGDSEEDTELS-p A0A0A0MTI2;S353-p GCVDPGDSEEDTELS 0.842210684381321 0.0542164789869152 0.03 0.263 1.44102838407165 16.8741984516941 0.03 0.263 0.717624341880672 0.0205390406682712 0.381118854371822 3.23545538911678 A0A0A0MTI2 SH2B2 A0A0A0MTI2.S353.p_SH2B2 A0A0A0MTI2_S353s _1_1_353_353 A0A0A0MTI2 A0A0A0MTI2|O14492 Adaptor protein with pleckstrin homology and src homology 2 domains, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19984.19984.3 23.06 22.33 3.753 5 1 1 0 1091.454 3192.4047 S353s TMT10 338 (K) HSWVADIQGCVDPGDsEEDTELSCTR (G) HS(0.0)WVADIQGCVDPGDS(0.99)EEDT(0.0)ELS(0.0)CT(0.0)R C:Carbamidomethylation,s:Phosphorylated S SH2B2 73084.2 1 1 5093.1 23.06 HUMAN 1 1.441 16.8742 GCVEVLQSMRALDFN-p P29353-7;S65-p GCVEVLQSMRALDFN 0.466667919827382 0.107345719291196 -0.112333333333333 -0.212333333333333 6.10833761471512 12.8002399824475 -0.112333333333333 -0.212333333333333 0.245000086969044 0.0524778461240033 -1.30384012164355 -2.4738003658666 P29353 SHC1 P29353.7.S65.p_SHC1 P29353-7_S65s _1_1_65_65 P29353-7 P29353-7|P29353-2|P29353-3 Isoform 7 of SHC-transforming protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22179.22179.3 10.41 10.41 10.41 2 1 1 0 594.6036 1701.8324 S65s TMT10 56 (R) YMGCVEVLQsMR (A) Y(0.0)MGCVEVLQS(0.99)MR C:Carbamidomethylation,s:Phosphorylated S SHC1 52137.1 1 3 2336.1 87.32 HUMAN 1 -6.1083 -12.8002 GCVTMLKSPNRTTAV-p Q9Y2X0;S809-p GCVTMLKSPNRTTAV 0.832644378923202 0.0415631668472274 -0.0466666666666667 0.447 1.53583752715994 18.515093812934 -0.0466666666666667 0.447 0.7021279268841 0.0140763682135227 -0.403366524250889 3.56424711145321 Q9Y2X0 MED16 Q9Y2X0.S809.p_MED16 Q9Y2X0_S809s _1_1_809_809 Q9Y2X0 Q9Y2X0|Q9Y2X0-3|Q9Y2X0-2 Mediator of RNA polymerase II transcription subunit 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4973.4973.3 8.43 8.43 8.433 3 1 1 0 504.6164 1431.8684 S809s TMT10 809 (K) sPNRTTAVK (Q) S(0.99)PNRT(0.0)T(0.0)AVK K:TMT10,s:Phosphorylated S MED16 98503.1 1 3 3160.1 59.02 HUMAN 1 -1.5358 18.5151 GDAEKVASLLGKKGA-p Q9P0K7;S37-p GDAEKVASLLGKKGA 0.201694340984261 0.0176654690219716 -0.247666666666667 0.398666666666667 13.5034786911222 24.1485979014093 -0.247666666666667 0.398666666666667 0.0446325942640771 0.00384715965674715 -2.60219923052526 4.82556741362452 Q9P0K7 RAI14 Q9P0K7.S37.p_RAI14 Q9P0K7_S37s _1_1_37_37 Q9P0K7 Q9P0K7|Q9P0K7-3|Q9P0K7-4|D6REL2|D6RBW6|D6RB25 Ankycorbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23251.23251.2 10.21 3.87 99 1 1 1 0 613.3692 1145.7658 S37s TMT10 35 (K) VAsLLGK (K) VAS(1.0)LLGK K:TMT10,s:Phosphorylated S RAI14 110666.9 2 2 498.1 292.24 HUMAN 1 -13.5035 24.1486 GDAFRCASCPYLGMP-p Q6FI81;S287-p GDAFRCASCPYLGMP 0.104209357384164 0.0307627205450693 0.723666666666667 0.333 20.7114785278855 20.4359879095135 0.723666666666667 0.333 0.00848891426160735 0.00904484667072765 4.03333247980817 3.96933105988102 Q6FI81 CIAPIN1 Q6FI81.S287.p_CIAPIN1 Q6FI81_S287s _1_1_287_287 Q6FI81 Q6FI81|Q6FI81-3|H3BV90 Anamorsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22537.22537.4 13.02 13.02 4.312 2 1 1 0 670.8391 2600.3642 S287s TMT10 285 (R) CAsCPYLGMPAFKPGEK (V) CAS(0.99)CPY(0.0)LGMPAFKPGEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CIAPIN1 34152.3 1 6 2232.1 92.49 HUMAN 1 20.7115 20.436 GDAKVELSPGPPKPA-p Q8IZ73;S68-p GDAKVELSPGPPKPA 0.693879637856397 0.57996969532645 -0.0596666666666667 -0.063 2.97809904032299 3.1918050915308 -0.0596666666666667 -0.063 0.503721045357969 0.479534094769026 -0.715960446312812 -0.758997455689745 Q8IZ73 RPUSD2 Q8IZ73.S68.p_RPUSD2 Q8IZ73_S68s _1_1_68_68 Q8IZ73 Q8IZ73|Q8IZ73-2 RNA pseudouridylate synthase domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9315.9315.4 19.38 14.98 10.638 2 1 1 0 852.9451 3328.7965 S68s TMT10 51 (R) ASHQQNGDAGGDAKVELsPGPPKPAGR (E) AS(0.0)HQQNGDAGGDAKVELS(0.99)PGPPKPAGR K:TMT10,s:Phosphorylated S RPUSD2 61880.9 11 1 3197.1 57.86 HUMAN 1 -2.9781 -3.1918 GDARFQKSPPDLKET-p O75410;S287-p GDARFQKSPPDLKET 0.0386603595331013 0.00658370813716136 -0.982666666666667 -0.99 32.2284203507811 31.3566162147037 -0.982666666666667 -0.99 0.000598629293507172 0.000731708969089485 -7.13984015940003 -6.84423429880709 O75410 TACC1 O75410.S287.p_TACC1 O75410_S287s _1_1_287_287 O75410 O75410-2|O75410-7|O75410-3 Transforming acidic coiled-coil-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16162.16162.3 10.45 7.94 99 1 1 1 0 609.6842 1747.0721 S287s TMT10 284 (R) FQKsPPDLK (E) FQKS(1.0)PPDLK K:TMT10,s:Phosphorylated S TACC1 88648.6 1 10 442.1 311.73 HUMAN 1 -32.2284 -31.3566 GDDEDACSDTEATEA-p P41236;S87-p GDDEDACSDTEATEA 0.561302634517717 0.0605965555656353 0.0806666666666667 0.237333333333333 4.61654025762762 16.2189192213838 0.0806666666666667 0.237333333333333 0.345418802508427 0.023884055839283 1.03329376573973 3.10810518293085 P41236 PPP1R2 P41236.S87.p_PPP1R2 P41236_S87s_1_1_87_87 P41236 P41236 Protein phosphatase inhibitor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23428.23428.3 29.28 29.28 1.194 7 1 1 0 1389.5737 4070.7449 M78m S87s TMT10 68 (K) IDEPSTPYHSmMGDDEDACsDTEATEAMAPDILAR (K) IDEPS(0.0)T(0.0)PY(0.0)HS(0.0)M(0.99)M(0.0)GDDEDACS(0.99)DT(0.0)EAT(0.0)EAM(0.0)APDILAR C:Carbamidomethylation,m:Oxidized methionine,s:Phosphorylated S PPP1R2 23071.9 24 3 717.1 237.75 HUMAN 1 4.6165 16.2189 GDDHDDTSDSDSDGL-p Q9BTC0;S152-p GDDHDDTSDSDSDGL 0.455873769250606 0.45030256058661 -0.102 -0.079 6.29119438567189 4.61894502919055 -0.102 -0.079 0.234898671963643 0.345227590458468 -1.33627610211441 -1.03354519119113 Q9BTC0 DIDO1 Q9BTC0.S152.p_DIDO1 Q9BTC0_S152s _1_1_152_152 Q9BTC0 Q9BTC0|Q9BTC0-1|Q9BTC0-3|Q9BTC0-2 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13283.13283.3 15.78 13.33 1.109 5 1 1 0 982.1398 2864.4365 S152s TMT10 142 (K) VKGGDDHDDTsDSDSDGLTLK (E) VKGGDDHDDT(0.0)S(0.99)DS(0.0)DS(0.0)DGLT(0.0)LK K:TMT10,s:Phosphorylated S DIDO1 245579.9 1 3 153.1 505.54 HUMAN 1 -6.2912 -4.6189 GDDVARISWYLRDII-p Q13011;S139-p GDDVARISWYLRDII 0.69315965240548 0.0875814623636463 -0.0653333333333334 0.340666666666667 2.9869171593961 14.0006109790011 -0.0619495244034293 0.340666666666667 0.502699304143159 0.0398051167536469 -0.717753771730673 2.6914160591655 Q13011 ECH1 Q13011.S139.p_ECH1 Q13011_S139s _1_1_139_139 Q13011 Q13011 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23180.23180.3 10.95 10.95 6.283 2 1 1 0 587.2966 1679.9067 S139s TMT10 132 (K) GDDVARIsWYLR (D) GDDVARIS(0.99)WY(0.0)LR s:Phosphorylated S ECH1 36157.9 2 1 3581.1 47.75 HUMAN 1 -2.9869 14.0006 GDEEEYDTDEIDSSS-p Q9NUY8;T562-p GDEEEYDTDEIDSSS 0.476197539528853 0.00949153116870816 -0.14 0.513333333333333 5.93053187980532 28.5543347885576 -0.14 0.513333333333333 0.255238869285584 0.00139497531047536 -1.27217852031833 5.99514881996866 Q9NUY8 TBC1D23 Q9NUY8.T562.p_TBC1D23 Q9NUY8_T562t _1_1_562_562 Q9NUY8 Q9NUY8|Q9NUY8-2|E9PGE5 TBC1 domain family member 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19983.19983.4 17.53 17.53 1.223 7 1 1 0 976.6919 3823.7744 T562t Hydrogen 547 (R) GVKPVFSIGDEEEYDtDEIDSSSMSDDDRK (E) GVKPVFS(0.0)IGDEEEY(0.0)DT(0.99)DEIDS(0.0)S(0.0)S(0.0)MS(0.0)DDDRK K:TMT10-Lys-Only,t:Phosphorylated T TBC1D23 79176.3 7 6 2254.1 91.17 HUMAN 1 -5.9305 28.5543 GDEENGFSDRTSKSH-p Q13017;S1138-p GDEENGFSDRTSKSH 0.342075757494071 0.111464880605552 0.322333333333333 -0.316666666666667 8.65479915776193 12.5790472404248 0.322333333333333 -0.316666666666667 0.136307604106645 0.0552198567867367 1.74860759981068 -2.43419874582772 Q13017 ARHGAP5 Q13017.S1138.p_ARHGAP5 Q13017_S1138s_1_1_1138_1138 Q13017 Q13017|Q13017-2 Rho GTPase-activating protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12427.12427.3 18.19 14.61 1.145 5 1 1 0 962.4382 2804.3488 N1135n S1138s TMT10 1123 (R) NSFVNNTQGDEEnGFsDRTSK (S) N(0.0)S(0.0)FVN(0.0)N(0.0)T(0.0)QGDEEN(0.99)GFS(0.99)DRT(0.0)S(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S ARHGAP5 173940.2 1 8 639.1 255.25 HUMAN 1 8.6548 -12.579 GDEEVPRSPFKVKVL-p P21333-2;S1533-p GDEEVPRSPFKVKVL 0.148266672319898 0.0425400240960049 -0.257 -0.428 16.772726716996 18.3696049340655 -0.257 -0.428 0.021024579974763 0.0145559148577699 -3.21800440784183 -3.53448744612846 P21333 FLNA P21333.2.S1533.p_FLNA P21333-2_S1533s _1_1_1533_1533 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54|A0A087WWY3 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25586.25586.3 19.46 19.46 4.444 5 1 1 0 969.8202 2827.4918 S1533s TMT10 1516 (R) EGPYSISVLYGDEEVPRsPFK (V) EGPY(0.0)S(0.0)IS(0.0)VLY(0.0)GDEEVPRS(0.99)PFK K:TMT10,s:Phosphorylated S FLNA 282751.6 4 10 198.1 454.47 HUMAN 1 -16.7727 -18.3696 GDEKAEPSPQSWSSL-p Q8WXH0;S4136-p GDEKAEPSPQSWSSL 0.18778685970193 0.303010010226008 -0.440333333333333 0.175666666666667 14.2588347850935 6.84646775948938 -0.440333333333333 0.175666666666667 0.0375073621242203 0.20670606715322 -2.74056601504052 1.43372309867572 Q8WXH0 SYNE2 Q8WXH0.S4136.p_SYNE2 Q8WXH0_S4136s _1_1_4136_4136 Q8WXH0 Q8WXH0|A0A0C4DGK3|Q8WXH0-7|Q8WXH0-2 Nesprin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28519.28519.2 13.61 13.61 2.349 4 1 1 0 1021.0162 1961.0533 S4136s TMT10 4133 (K) AEPsPQSWSSLWK (H) AEPS(0.99)PQS(0.0)WS(0.0)S(0.0)LWK K:TMT10,s:Phosphorylated S SYNE2 802304.8 4 11 188.1 472.65 HUMAN 1 -14.2588 6.8465 GDEKELESSEEGGSA-p Q9HAS0;S18-p GDEKELESSEEGGSA 0.253185624491412 0.0163407056721811 -0.239666666666667 0.413333333333333 11.3735189646869 24.6764706267449 -0.239666666666667 0.413333333333333 0.0728866690971886 0.0034068494105841 -2.22168091002407 4.95621877424798 Q9HAS0 C17orf75 Q9HAS0.S18.p_C17orf75 Q9HAS0_S18s _1_1_18_18 Q9HAS0 Q9HAS0|J9JIC5|J3QKQ1 Protein Njmu-R1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4537.4537.3 12.91 12.91 1.166 3 1 1 0 658.6268 1893.8987 S18s TMT10 15 (K) ELEsSEEGGSAEERR (L) ELES(0.99)S(0.0)EEGGS(0.0)AEERR s:Phosphorylated S C17orf75 45305.4 2 2 2125.1 96.67 HUMAN 1 -11.3735 24.6765 GDENAPGSPSFDQPH-p Q9H972;S512-p GDENAPGSPSFDQPH 0.25219241857111 0.0234909797806624 0.166333333333333 0.317666666666667 11.4128011913289 22.220907947106 0.166333333333333 0.317666666666667 0.0722303768735416 0.00599665695512019 2.22859331108761 4.36795006112009 Q9H972 C14orf93 Q9H972.S512.p_C14orf93 Q9H972_S512s_1_1_512_512 Q9H972 A0A0C4DFZ6|Q9H972 Uncharacterized protein C14orf93 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27818.27818.5 26.64 21.13 0 6 1 1 0 1181.5555 5822.7775 N508n S512s TMT10 472 (R) VYGPPSDRLPSAEAQLLPPELYNPNFQEEEDEGGDEnAPGsPSFDQPHK (T) VY(0.0)GPPS(0.0)DRLPS(0.0)AEAQLLPPELY(0.0)N(0.0)PN(0.50)FQEEEDEGGDEN(0.50)APGS(0.99)PS(0.0)FDQPHK K:TMT10,n:Deamidated,s:Phosphorylated S C14orf93 59380.4 4 5 2148.1 95.78 HUMAN 1 11.4128 22.2209 GDEPLAETESESEAE-p Q8NC44;T279-p GDEPLAETESESEAE 0.911888053863514 0.595215852056009 0.0163333333333333 -0.0521666666666667 0.779719102368304 3.05096361792677 0.0163333333333333 -0.0521666666666667 0.835657066005167 0.495340271903284 0.217672351095574 -0.730641156723431 Q8NC44 FAM134A Q8NC44.T279.p_FAM134A Q8NC44_T279tS281s_2_2_279_281 Q8NC44 Q8NC44 Reticulophagy regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32424.32424.5 15.78 15.78 1.209 4 2 2 0 752.7468 3599.8005 T279t S281s TMT10 267 (K) NAPPGGDEPLAEtEsESEAELAGFSPVVDVK (K) NAPPGGDEPLAET(0.99)ES(0.99)ES(0.0)EAELAGFS(0.0)PVVDVK K:TMT10,t:Phosphorylated T,s:Phosphorylated S RETREG2 58171.3 13 7 1304.1 156.18 HUMAN 2 0.7797 -3.051 GDEVAEVSFEKETQE-p Q9NQT8;S858-p GDEVAEVSFEKETQE 0.176409109456939 0.0282928627273433 -0.224 -0.326333333333333 14.9624060946137 20.9770101952589 -0.224 -0.326333333333333 0.0318977015701995 0.00798544238282252 -2.87140337307642 -4.08776979278937 Q9NQT8 KIF13B Q9NQT8.S858.p_KIF13B Q9NQT8_S858s _1_1_858_858 Q9NQT8 Q9NQT8 Kinesin-like protein KIF13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18782.18782.4 21.97 20.99 4.828 2 1 1 0 737.6263 2867.5241 S858s TMT10 848 (R) IAGGDEVAEVsFEKETQENK (L) IAGGDEVAEVS(0.99)FEKET(0.0)QENK K:TMT10,s:Phosphorylated S KIF13B 204097.3 2 5 335.1 355.82 HUMAN 1 -14.9624 -20.977 GDEYAEDSSDEEDIR-p Q14137;S126-p GDEYAEDSSDEEDIR 0.194002306690035 0.268699764842559 0.206666666666667 0.109333333333333 13.8939309737718 7.51603577330743 0.206666666666667 0.109333333333333 0.0407949967270934 0.177172544598839 2.67346462757657 1.550613364948 Q14137 BOP1 Q14137.S126.p_BOP1 Q14137_S126sS127s_2_2_126_127 Q14137 Q14137|Q14137-2 Ribosome biogenesis protein BOP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32130.32130.4 15.81 15.81 1.154 6 2 2 0 1287.8026 4987.2768 S126s S127s N134n TMT10 118 (R) IGDEYAEDssDEEDIRnTVGNVPLEWYDDFPHVGYDLDGRR (I) IGDEY(0.0)AEDS(0.99)S(0.99)DEEDIRN(0.99)T(0.0)VGN(0.0)VPLEWY(0.0)DDFPHVGY(0.0)DLDGRR s:Phosphorylated S,n:Deamidated BOP1 84312.6 17 5 2879.1 67.41 HUMAN 1 13.8939 7.516 GDEYNVESIDGQPGA-p P46777;S134-p GDEYNVESIDGQPGA 0.472789686038824 0.0306501388897623 0.117 0.292333333333333 5.99455159561507 20.4549854951857 0.117 0.292333333333333 0.251503967473382 0.00900536770409596 1.28359292867637 3.97345612457464 P46777 RPL5 P46777.S134.p_RPL5 P46777_S134s _1_1_134_134 P46777 P46777 60S ribosomal protein L5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.33175.33175.4 23.73 20.38 1.176 6 1 1 0 1037.2294 4065.9225 S134s TMT10 118 (K) IYEGQVEVTGDEYNVEsIDGQPGAFTCYLDAGLAR (T) IY(0.0)EGQVEVT(0.0)GDEY(0.0)NVES(0.99)IDGQPGAFT(0.0)CY(0.0)LDAGLAR C:Carbamidomethylation,s:Phosphorylated S RPL5 34590.2 1 1 3573.1 47.97 HUMAN 1 5.9946 20.455 GDFGLACTDILQKNT-p Q9BQI3;T467-p GDFGLACTDILQKNT 0.495525912141204 0.0166076750945612 -0.107333333333333 0.418666666666667 5.61545490219429 24.5756404699172 -0.107333333333333 0.418666666666667 0.274444486126807 0.00348687158175966 -1.21574376349295 4.93107738233149 Q9BQI3 EIF2AK1 Q9BQI3.T467.p_EIF2AK1 Q9BQI3_T467t _1_1_467_467 Q9BQI3 Q9BQI3|Q9BQI3-2 Eukaryotic translation initiation factor 2-alpha kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30758.30758.3 13.66 8.48 99 1 1 1 0 697.0343 2009.1142 T467t TMT10 459 (K) IGDFGLACtDILQK (N) IGDFGLACT(1.0)DILQK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T EIF2AK1 71675.7 1 3 2626.1 76.5 HUMAN 1 -5.6155 24.5756 GDFGLSRYMEDSTYY-p E7ESA6;Y614-p GDFGLSRYMEDSTYY 0.699126902533387 0.532288618666558 -0.0903333333333333 0.0916666666666667 2.92108563420712 3.6819941994933 -0.0903333333333333 0.0916666666666667 0.510377401663998 0.428351784059063 -0.70433781327744 0.855695853625012 E7ESA6 NotFound E7ESA6.Y614.p_NotFound E7ESA6_Y614y _1_1_614_614 E7ESA6 E7ESA6|Q05397-5|Q05397-7|Q05397-2|E9PEI4|Q05397-3|Q05397-4 Focal adhesion kinase 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.15967.16545.2 16.82 16.82 3.593 5 1 1 0 869.3969 1657.8184 Y614y TMT10 614 (R) yMEDSTYYK (A) Y(0.99)MEDS(0.0)T(0.0)Y(0.0)Y(0.0)K K:TMT10,y:Phosphorylated Y PTK2 124992.4 17 1 52.1 42.66 HUMAN 1 -2.9211 3.682 GDFTHDQSISQKLMA-p Q92621;S942-p GDFTHDQSISQKLMA 0.859564008462243 0.180624739981569 -0.0293333333333333 0.148 1.28389500918898 9.77606664776832 -0.0293333333333333 0.148 0.744064353750808 0.105291505445783 -0.343648968917284 1.94206492117177 Q92621 NUP205 Q92621.S942.p_NUP205 Q92621_S942s _1_1_942_942 Q92621 Q92621 Nuclear pore complex protein Nup205 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17657.17657.3 8.94 8.94 8.935 3 1 1 0 705.0291 2033.1068 S942s TMT10 933 (K) LVGDFTHDQsISQK (L) LVGDFT(0.0)HDQS(0.99)IS(0.0)QK K:TMT10,s:Phosphorylated S NUP205 230313.6 1 2 2077.1 98.86 HUMAN 1 -1.2839 9.7761 GDGAGAETPVIENRS-p E7ETA6;T1557-p GDGAGAETPVIENRS 0.354964433500167 0.880606670623547 0.238333333333333 -0.016 8.35804175955878 0.775429402788698 0.238333333333333 -0.016 0.145947219016942 0.836482885554224 1.69722142296144 -0.216537383687351 E7ETA6 PCM1 E7ETA6.T1557.p_PCM1 E7ETA6_T1557t _1_1_1557_1557 E7ETA6 E7ETA6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17232.17232.3 19.34 19.34 99 1 1 1 0 722.3528 2085.0661 T1557t TMT10 1546 (R) IIEDGDGAGAEtPVIENR (S) IIEDGDGAGAET(1.0)PVIENR t:Phosphorylated T PCM1 229381.8 1 47 13.1 1159.95 HUMAN 1 8.358 -0.7754 GDGALPRSDPNLSAP-p Q8N1I0-3;S1759-p GDGALPRSDPNLSAP 0.35954248405996 0.766062972058908 -0.127666666666667 0.041 8.25430741737533 1.5985141344795 -0.127666666666667 0.0410000000000001 0.149475239607318 0.692067709744674 -1.67924976503061 0.417887621405947 Q8N1I0 DOCK4 Q8N1I0.3.S1759.p_DOCK4 Q8N1I0-3_S1759s _1_1_1759_1759 Q8N1I0-3 Q8N1I0-3 Isoform 3 of Dedicator of cytokinesis protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21470.21470.4 18.55 18.55 2.315 2 1 1 0 755.138 2937.5657 S1759s TMT10 1746 (R) MLFNHIGDGALPRsDPNLSAPEK (A) MLFNHIGDGALPRS(0.99)DPNLS(0.0)APEK K:TMT10,s:Phosphorylated S DOCK4 228000 1 2 3555.1 48.3 HUMAN 1 -8.2543 1.5985 GDGELDLSGIDDLEI-p Q92994;S450-p GDGELDLSGIDDLEI 0.248650960362662 0.020379930359248 -0.337333333333333 -0.374 11.5419676585682 23.1515658513828 -0.337333333333333 -0.374 0.0701137561961504 0.00483997830410582 -2.25134575886782 -4.58516998393399 Q92994 BRF1 Q92994.S450.p_BRF1 Q92994_S450s _1_1_450_450 Q92994 Q92994|Q92994-5|Q92994-7|Q92994-3|Q92994-9 Transcription factor IIIB 90 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32949.32949.3 17.39 15.63 5.627 4 1 1 0 1163.864 3409.6444 S450s TMT10 440 (K) DASGDGELDLsGIDDLEIDRYILNESEAR (V) DAS(0.0)GDGELDLS(0.99)GIDDLEIDRY(0.0)ILNES(0.0)EAR s:Phosphorylated S BRF1 74808.7 1 3 1800.1 114.18 HUMAN 1 -11.542 -23.1516 GDHLHNDSQIEADFR-p P11387;S10-p GDHLHNDSQIEADFR 0.118673427068097 0.245834080491579 0.345666666666667 0.229 19.2520756466054 8.0306272552399 0.345666666666667 0.229 0.0118793433599499 0.157375554918907 3.72024443388893 1.6399513225172 P11387 TOP1 P11387.S10.p_TOP1 P11387_S10s _1_1_10_10 P11387 P11387 DNA topoisomerase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11671.11671.3 20.93 20.93 9.979 2 1 1 0 654.9375 1882.8314 S10s Acetyl 2 (M) SGDHLHNDsQIEADFR (L) S(0.0)GDHLHNDS(0.99)QIEADFR s:Phosphorylated S TOP1 91180.5 2 2 1682.1 121.32 HUMAN 1 19.2521 8.0306 GDHSRSISCPLKRQA-p Q9NW75;S58-p GDHSRSISCPLKRQA 0.148266672319898 0.0431624448404862 -0.487333333333333 0.441666666666667 16.7990517422701 18.2870219495214 -0.487333333333333 0.441666666666667 0.0208975236679428 0.0148353502824743 -3.22316039837941 3.51764979085255 Q9NW75 GPATCH2 Q9NW75.S58.p_GPATCH2 Q9NW75_S58s _1_1_58_58 Q9NW75 Q9NW75|Q9NW75-2 G patch domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15232.15232.2 8.74 2.06 8.742 2 1 1 0 671.8655 1262.7543 S58s TMT10 56 (R) SIsCPLK (R) S(0.0)IS(0.99)CPLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GPATCH2 59341.9 1 3 1558.1 131.71 HUMAN 1 -16.7991 18.287 GDIATCYSPRTSTES-p Q9NZN5;S1327-p GDIATCYSPRTSTES 0.481005429235313 0.0575933722753226 -0.129 -0.241666666666667 5.85016627406767 16.5122695521986 -0.129 -0.241666666666667 0.26000600153126 0.0223240529931481 -1.25782559668593 -3.16485429441694 Q9NZN5 ARHGEF12 Q9NZN5.S1327.p_ARHGEF12 Q9NZN5_S1327s _1_1_1327_1327 Q9NZN5 Q9NZN5|Q9NZN5-2|E9PMR6 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10588.10588.2 15.41 11.78 2.24 5 1 1 0 854.3849 1627.7947 S1327s TMT10 1317 (R) TGTGDIATCYsPR (T) T(0.0)GT(0.0)GDIAT(0.0)CY(0.0)S(0.99)PR C:Carbamidomethylation,s:Phosphorylated S ARHGEF12 174199.1 3 12 251.1 406.16 HUMAN 1 -5.8502 -16.5123 GDIDNVKSPEETEKD-p Q12830;S572-p GDIDNVKSPEETEKD 0.148266672319898 0.005001764779536 -0.783333333333333 0.679 16.7772594116653 33.554814766114 -0.783333333333333 0.679 0.0210026482459513 0.000441081175572716 -3.21889192534658 7.57703937155592 Q12830 BPTF Q12830.S572.p_BPTF Q12830_S572s _1_1_572_572 Q12830 Q12830|Q12830-2|Q12830-4|A0A0A0MR81 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10470.10470.3 14.49 12.3 1.433 2 1 1 0 895.8217 2605.4855 S572s TMT10 564 (K) KGDIDNVKsPEETEK (D) KGDIDNVKS(0.99)PEET(0.0)EK K:TMT10,s:Phosphorylated S BPTF 340995.1 7 2 94.1 610.41 HUMAN 1 -16.7773 33.5548 GDIFKEGSVKLRTRT-p Q9Y5K6;S224-p GDIFKEGSVKLRTRT 0.654595169249443 0.0970194926640938 -0.103 -0.397666666666667 3.44918380281232 13.3983848745459 -0.103 -0.397666666666667 0.4519408725111 0.0457258210670799 -0.810258932150444 -2.5816390286077 Q9Y5K6 CD2AP Q9Y5K6.S224.p_CD2AP Q9Y5K6_S224s _1_1_224_224 Q9Y5K6 Q9Y5K6 CD2-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26238.26238.4 14.89 14.89 99 1 1 1 0 556.0618 2141.2574 S224s TMT10 213 (R) GIGFGDIFKEGsVK (L) GIGFGDIFKEGS(1.0)VK K:TMT10,s:Phosphorylated S CD2AP 71678 4 2 413.1 321.76 HUMAN 1 -3.4492 -13.3984 GDIPASISLSEIDPL-p Q14D04;S478-p GDIPASISLSEIDPL 0.911605742223265 0.170911267603941 -0.0173333333333333 0.143 0.784143384968329 10.0866195960478 -0.0173333333333333 0.143 0.834806191633797 0.0980252684661018 -0.218820718590391 1.99594831383342 Q14D04 VEPH1 Q14D04.S478.p_VEPH1 Q14D04_S478s _1_1_478_478 Q14D04 Q14D04|Q14D04-2 Ventricular zone-expressed PH domain-containing protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27409.27409.5 31.95 23.55 2.146 6 1 1 0 1043.1173 5131.5911 S478s TMT10 459 (K) GVGSDDGEDENRGDIPASIsLSEIDPLGQGNDKLPFKTDTER (S) GVGS(0.0)DDGEDENRGDIPAS(0.0)IS(0.99)LS(0.0)EIDPLGQGNDKLPFKT(0.0)DT(0.0)ER K:TMT10,s:Phosphorylated S VEPH1 95542.4 10 9 341.1 353.64 HUMAN 1 -0.7841 10.0866 GDIRRRLSEQLAHTP-p Q9UBF8-2;S496-p GDIRRRLSEQLAHTP 0.962335251684196 0.0188873897905705 0.0143333333333333 0.380666666666667 0.322376888965709 23.7168771284153 0.0143333333333333 0.380666666666667 0.928458103593116 0.00424925003986117 0.0940443256221721 4.72046938034329 Q9UBF8 PI4KB Q9UBF8.2.S496.p_PI4KB Q9UBF8-2_S496s _1_1_496_496 Q9UBF8-2 A0A0B4J1S8|Q9UBF8|Q9UBF8-2|Q9UBF8-3 Isoform 2 of Phosphatidylinositol 4-kinase beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12834.12834.3 18.96 18.96 5.199 3 1 1 0 636.6702 1828.0278 S496s Hydrogen 494 (R) RLsEQLAHTPTAFK (R) RLS(0.99)EQLAHT(0.0)PT(0.0)AFK K:TMT10-Lys-Only,s:Phosphorylated S PI4KB 90547.4 11 8 325.1 361.79 HUMAN 1 0.3224 23.7169 GDKAKSESLELPQAA-p Q15040;S15-p GDKAKSESLELPQAA 0.672055923167882 0.216609867336628 -0.0573333333333333 -0.237666666666667 3.23284269488526 8.7394559586358 -0.0573333333333334 -0.237666666666667 0.475024194847459 0.133676296255976 -0.767321190066665 -1.76264830741377 Q15040 JOSD1 Q15040.S15.p_JOSD1 Q15040_S15s _1_1_15_15 Q15040 Q15040 Josephin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20172.20172.4 16.32 16.32 1.127 3 1 1 0 644.5849 2495.3546 S15s TMT10 13 (K) SEsLELPQAAPPQIYHEK (Q) S(0.0)ES(0.99)LELPQAAPPQIY(0.0)HEK K:TMT10,s:Phosphorylated S JOSD1 23482.7 6 1 3918.1 40.72 HUMAN 1 -3.2328 -8.7395 GDKGGAASPAATASD-p Q68DK7;S161-p GDKGGAASPAATASD 0.904619854374241 0.0237673258330995 0.019 0.299 0.855809787906989 22.1468868951375 0.019 0.299 0.821143427698758 0.00609973981435554 0.237308198904305 4.35095898954535 Q68DK7 MSL1 Q68DK7.S161.p_MSL1 Q68DK7_S161s _1_1_161_161 Q68DK7 Q68DK7|J3KSZ8|J3QQY0 Male-specific lethal 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.31758.31758.3 28.31 28.31 1.122 7 1 1 0 1346.3557 3957.0919 S161s TMT10 157 (K) GGAAsPAATASDPAGPPPLPLPGPPPLAPTATAGTLAASEGR (W) GGAAS(0.99)PAAT(0.0)AS(0.0)DPAGPPPLPLPGPPPLAPT(0.0)AT(0.0)AGT(0.0)LAAS(0.0)EGR s:Phosphorylated S MSL1 67811.9 4 5 324.1 362.01 HUMAN 1 0.8558 22.1469 GDKMNLYSLCKKIEQ-p Q8TDX7;S245-p GDKMNLYSLCKKIEQ 0.113753456802484 0.29786347603307 -0.393333333333333 -0.187 19.6900557577207 6.94264483008518 -0.393333333333333 -0.187 0.0107397562381299 0.202178754592341 -3.81274647609413 -1.45057224070849 Q8TDX7 NEK7 Q8TDX7.S245.p_NEK7 Q8TDX7_S245s _1_1_245_245 Q8TDX7 Q8TDX7 Serine/threonine-protein kinase Nek7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22230.22230.2 7.21 7.21 7.206 2 1 1 0 783.8953 1486.8162 S245s TMT10 241 (K) MNLYsLCK (K) MNLY(0.0)S(0.99)LCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NEK7 35006.8 1 3 3294.1 54.61 HUMAN 1 -19.6901 -6.9426 GDKNRLLSPRPSLLT-p Q9Y618;S939-p GDKNRLLSPRPSLLT 0.691847298094592 0.304056095283786 0.0706666666666667 -0.174666666666667 3.00005840833182 6.82858698567267 0.0706666666666667 -0.174666666666667 0.501180493197768 0.20755887181905 0.720424162030592 -1.43058805618467 Q9Y618 NCOR2 Q9Y618.S939.p_NCOR2 Q9Y618_S939s _1_1_939_939 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21931.21931.4 15.56 15.56 1.681 4 1 1 0 508.0321 1949.1381 S939s TMT10 937 (R) LLsPRPSLLTPTGDPR (A) LLS(0.99)PRPS(0.0)LLT(0.0)PT(0.0)GDPR s:Phosphorylated S NCOR2 275540.8 6 9 16.1 1053.89 HUMAN 1 3.0001 -6.8286 GDKRSWPSPKNRSRP-p P48634;S1435-p GDKRSWPSPKNRSRP 0.194933326368064 0.215122720821492 -0.307666666666667 0.243666666666667 13.8504010932803 8.78081241314525 -0.307666666666667 0.243666666666667 0.0412059461530362 0.132409382036284 -2.66549276420589 1.76980149013191 P48634 PRRC2A P48634.S1435.p_PRRC2A P48634_S1435s _1_1_1435_1435 P48634 P48634|P48634-3|P48634-2 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9585.9585.3 8.82 8.82 6.965 2 1 1 0 465.9236 1315.7887 S1435s TMT10 1431 (K) RSWPsPK (N) RS(0.0)WPS(0.99)PK K:TMT10,s:Phosphorylated S PRRC2A 229315.4 3 30 36.1 882.05 HUMAN 1 -13.8504 8.7808 GDLAKAASSELPADI-p Q9C0C2;S260-p GDLAKAASSELPADI 0.134077347077856 0.00917359434218356 -0.595 0.464666666666667 17.9676487769919 28.8030951361751 -0.595 0.464666666666667 0.0159674337273978 0.00131731757614494 -3.45572099575411 6.06695328357899 Q9C0C2 TNKS1BP1 Q9C0C2.S260.p_TNKS1BP1 Q9C0C2_S260s _1_1_260_260 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16988.16988.2 15.19 15.19 1.107 3 1 1 0 863.9543 1646.9365 S260s TMT10 258 (K) AAsSELPADISK (P) AAS(0.99)S(0.0)ELPADIS(0.0)K K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 2 9 4.1 2105.7 HUMAN 1 -17.9676 28.8031 GDLFPPFSPPPSPRG-p Q12767-2;S221-p GDLFPPFSPPPSPRG 0.247048592039774 0.149976496026504 0.183666666666667 0.156 11.6038587535152 10.8423727796888 0.183666666666667 0.156 0.069121654460989 0.0823687967897863 2.26226075363824 2.12757329791588 Q12767 KIAA0195 Q12767.2.S221.p_KIAA0195 Q12767-2_S221s _1_1_221_221 Q12767-2 Q12767-2|C9JL75 Isoform 2 of Transmembrane protein 94 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28766.28766.4 17.7 17.7 1.852 2 1 1 0 849.4426 3314.7825 S221s TMT10 202 (R) GIKDDEHIVLEPGDLFPPFsPPPSPR (G) GIKDDEHIVLEPGDLFPPFS(0.99)PPPS(0.0)PR K:TMT10,s:Phosphorylated S TMEM94 156822 3 1 1431.1 142.91 HUMAN 1 11.6039 10.8424 GDLLLPPSPKVEKKD-p Q5TH69;S1991-p GDLLLPPSPKVEKKD 0.948613986012936 0.864816866291971 0.0113333333333333 -0.0186666666666666 0.454608837124095 0.889543069846346 0.0113333333333333 -0.0186666666666667 0.900614876201363 0.814790005242995 0.130858248848141 -0.24591338399069 Q5TH69 ARFGEF3 Q5TH69.S1991.p_ARFGEF3 Q5TH69_S1991s _1_1_1991_1991 Q5TH69 Q5TH69 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21585.21793.3 13.68 13.68 99 1 1 1 0 587.3304 1680.0096 S1991s TMT10 1981 (K) AGGGDLLLPPsPK (V) AGGGDLLLPPS(1.0)PK K:TMT10,s:Phosphorylated S ARFGEF3 244013.5 14 11 618.1 260.46 HUMAN 1 0.4546 -0.8895 GDLLSGESL______-p Q9HCJ0-2;S1725-p GDLLSGESL______ 0.0717004271880835 0.789524528525792 -0.386666666666667 -0.0406666666666667 24.7106491407056 1.42688051187191 -0.386666666666667 -0.0406666666666667 0.0033801430937326 0.719965935705071 -4.97086442058045 -0.377736579042261 Q9HCJ0 TNRC6C Q9HCJ0.2.S1725.p_TNRC6C Q9HCJ0-2_S1725s _1_1_1725_1725 Q9HCJ0-2 A0A1B0GU24|Q9HCJ0-2 Isoform 2 of Trinucleotide repeat-containing gene 6C protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.37984.37984.2 16.62 16.62 1.34 6 1 1 0 1245.1714 2409.369 S1725s TMT10 1705 (R) VIGSPTPLTTLLPGDLLSGEsL (-) VIGS(0.0)PT(0.0)PLT(0.0)T(0.0)LLPGDLLS(0.0)GES(0.99)L s:Phosphorylated S TNRC6C 179888.3 1 9 1012.1 188.79 HUMAN 1 -24.7106 -1.4269 GDLNHLVSATMSGVT-p P07437;S230-p GDLNHLVSATMSGVT 0.686670412534458 0.191741464164506 -0.058 0.199666666666667 3.06397322901496 9.43230629295905 -0.058 0.199666666666667 0.493858663875066 0.113964442598422 -0.733376296919974 1.88251455102451 P07437 TUBB P07437.S230.p_TUBB P07437_S230s_1_1_230_230 P07437 Q13885|Q9BVA1|P68371|P07437|P04350|Q5JP53|Q5ST81 Tubulin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35363.35363.3 8.65 8.65 2.51 9 1 1 0 1006.8284 2937.5011 N226n S230s TMT10 217 (K) LTTPTYGDLnHLVsATMSGVTTCLR (F) LT(0.0)T(0.0)PT(0.0)Y(0.0)GDLN(1.0)HLVS(0.99)AT(0.0)MS(0.0)GVT(0.0)T(0.0)CLR C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S TUBB 50126.4 3 15 333.1 357.15 HUMAN 1 -3.064 9.4323 GDLPAPVTPQPRSIS-p Q8NFH5;T48-p GDLPAPVTPQPRSIS 0.505955843363506 0.868466690377742 -0.104666666666667 -0.0173333333333333 5.4620673869932 0.862106814925704 -0.104666666666667 -0.0173333333333333 0.284310737105897 0.819953678411391 -1.18810094725291 -0.23889937359787 Q8NFH5 NUP35 Q8NFH5.T48.p_NUP35 Q8NFH5_T48t _1_1_48_48 Q8NFH5 Q8NFH5|F8WEL4|F8WCF5 Nucleoporin NUP53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37090.37090.4 23.84 18.11 3.724 5 1 1 0 1381.1957 5441.7938 T48t Acetyl 2 (M) AAFAVEPQGPALGSEPMMLGSPTSPKPGVNAQFLPGFLMGDLPAPVtPQPR (S) AAFAVEPQGPALGS(0.0)EPMMLGS(0.0)PT(0.0)S(0.0)PKPGVNAQFLPGFLMGDLPAPVT(0.99)PQPR K:TMT10,t:Phosphorylated T NUP35 34887.3 6 2 627.1 257.69 HUMAN 1 -5.4621 -0.8621 GDLSPPDSPEPKAIT-p Q9NYV4-2;S685-p GDLSPPDSPEPKAIT 0.200244449835346 0.644316205228993 0.344166666666667 -0.0485 13.5898740943074 2.60221875807461 0.344166666666667 -0.0485 0.0437534789482939 0.549260191764563 2.6179221674661 -0.638308915391376 Q9NYV4 CDK12 Q9NYV4.2.S685.p_CDK12 Q9NYV4-2_S681sS685s_2_2_681_685 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.34303.34927.4 20.75 20.75 11.644 3 2 2 0 838.1741 3189.7448 S681s S685s TMT10 664 (R) HLLTDLPLPPELPGGDLsPPDsPEPK (A) HLLT(0.0)DLPLPPELPGGDLS(0.99)PPDS(0.99)PEPK K:TMT10,s:Phosphorylated S CDK12 163853.1 57 43 59.1 708.76 HUMAN 2 13.5899 -2.6022 GDLVKKESPPKPKDP-p Q68EM7-2;S497-p GDLVKKESPPKPKDP 0.234926195663273 0.0270981587443738 -0.277666666666667 0.556666666666667 12.0585541470785 21.2641341507165 -0.277666666666667 0.556666666666667 0.0622507495832107 0.00747457639342916 -2.34272475916456 4.15145152388875 Q68EM7 ARHGAP17 Q68EM7.2.S497.p_ARHGAP17 Q68EM7-2_S497s _1_1_497_497 Q68EM7-2 Q68EM7-2 Isoform 2 of Rho GTPase-activating protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12279.12279.4 11.66 11.66 6.885 2 1 1 0 756.9415 2944.7754 S497s TMT10 495 (K) KEsPPKPKDPVSAAVPAPGR (N) KES(0.99)PPKPKDPVS(0.0)AAVPAPGR K:TMT10,s:Phosphorylated S ARHGAP17 88006.8 5 4 2036.2 101.4 HUMAN 1 -12.0586 21.2641 GDMADAASPCSVVND-p P52888;S16-p GDMADAASPCSVVND 0.897297614132302 0.132617916861167 -0.0206666666666667 0.175333333333333 0.922515179437322 11.5638642166083 -0.0206666666666667 0.175333333333333 0.808627453852844 0.069761141500901 -0.254327625481113 2.25412946172665 P52888 THOP1 P52888.S16.p_THOP1 P52888_S16s _1_1_16_16 P52888 P52888 Thimet oligopeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29652.29652.5 25.03 21.34 5.097 3 1 1 0 900.4292 4418.1402 S16s TMT10 1 (-) MKPPAACAGDMADAAsPCSVVNDLRWDLSAQQIEER (T) MKPPAACAGDMADAAS(0.99)PCS(0.0)VVNDLRWDLS(0.0)AQQIEER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S THOP1 79751.2 15 1 3234.1 56.35 HUMAN 1 -0.9225 11.5639 GDMKYGIYAVENEHM-p Q9UEU0;Y115-p GDMKYGIYAVENEHM 0.190312127567691 0.795708259821348 -0.213666666666667 0.0723333333333333 14.0940625623277 1.38586879628717 -0.213666666666667 0.0723333333333334 0.038957739007738 0.726796990576343 -2.71020492656808 0.368014189725478 Q9UEU0 VTI1B Q9UEU0.Y115.p_VTI1B Q9UEU0_Y115y _1_1_115_115 Q9UEU0 Q9UEU0|Q9UEU0-2 Vesicle transport through interaction with t-SNAREs homolog 1B GG20160819_MSz_CCLE_T4D7_pY_Injection_02.15562.15562.3 17.23 17.23 2.539 2 1 1 0 635.6226 1824.89 Y115y TMT10 112 (K) YGIyAVENEHMNR (L) Y(0.0)GIY(0.99)AVENEHMNR y:Phosphorylated Y VTI1B 26688 1 1 208.1 17.23 HUMAN 1 -14.0941 1.3859 GDMPPSVTPRTCNSP-p Q14694;T205-p GDMPPSVTPRTCNSP 0.365755403490374 0.143072834818274 0.126 0.15 8.10619973852058 11.1264340773458 0.126 0.15 0.154660719468591 0.0771536705529727 1.65357855445864 2.17727980434535 Q14694 USP10 Q14694.T205.p_USP10 Q14694_T205t_1_1_205_205 Q14694 Q14694|Q14694-2|Q14694-3 Ubiquitin carboxyl-terminal hydrolase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25852.25852.4 31.56 27.55 1.148 8 1 1 0 1164.2725 4573.0932 N178n T205t TMT10 165 (K) DGGDDSISTEALVnGHANSAVPNSVSAEDAEFMGDMPPSVtPR (T) DGGDDS(0.0)IS(0.0)T(0.0)EALVN(0.99)GHAN(0.0)S(0.0)AVPN(0.0)S(0.0)VS(0.0)AEDAEFMGDMPPS(0.0)VT(0.99)PR n:Deamidated,t:Phosphorylated T USP10 87759.8 15 6 358.1 346.34 HUMAN 1 8.1062 11.1264 GDMSKNVSQSQMAKL-p P61011;S451-p GDMSKNVSQSQMAKL 0.434272682849394 0.498860931176583 0.138 -0.118 6.67267864013799 4.04094043468144 0.138 -0.118 0.21514543520773 0.394371894320628 1.40358669335397 -0.924789536817726 P61011 SRP54 P61011.S451.p_SRP54 P61011_S451s _1_1_451_451 P61011 P61011|P61011-2|G3V4F7 Signal recognition particle 54 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8658.8658.2 13.29 13.29 2.159 2 1 1 0 765.8912 1450.8088 S451s TMT10 449 (K) NVsQSQMAK (L) NVS(0.99)QS(0.0)QMAK K:TMT10,s:Phosphorylated S SRP54 55989.1 1 3 3942.1 40.43 HUMAN 1 6.6727 -4.0409 GDNNFSDSEEGEGLE-p Q13127;S87-p GDNNFSDSEEGEGLE 0.47332174333296 0.4025652934234 0.104333333333333 0.0816666666666667 5.98355637029429 5.25625781078964 0.104333333333333 0.0816666666666667 0.252141517898991 0.298108403644595 1.28163371840963 1.15057536580844 Q13127 REST Q13127.S87.p_REST Q13127_S85sS87s_2_2_85_87 Q13127 L0B3M6|Q13127|Q13127-4|L0B3Z2|A0A087X1C2|L0B1V4|Q13127-3|A0A1W2PQA1|Q13127-2 RE1-silencing transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28195.28195.5 20.52 20.52 8.369 3 2 2 0 1025.252 4962.312 S85s S87s TMT10 72 (R) QMAELMPVGDNNFsDsEEGEGLEESADIKGEPHGLENMELR (S) Q(0.0)M(0.0)AELM(0.0)PVGDN(0.0)N(0.0)FS(0.99)DS(0.99)EEGEGLEES(0.0)ADIKGEPHGLEN(0.0)M(0.0)ELR K:TMT10,s:Phosphorylated S REST 123239.4 6 58 240.5 415.72 HUMAN 1 5.9836 5.2563 GDPECEGSPPEHSPE-p Q5TH69;S1061-p GDPECEGSPPEHSPE 0.415161918072873 0.259916565648078 0.155666666666667 -0.159 7.04374217695307 7.70915894072177 0.155666666666667 -0.159 0.197526688217595 0.169466595946915 1.46866789782593 -1.58418011580281 Q5TH69 ARFGEF3 Q5TH69.S1061.p_ARFGEF3 Q5TH69_S1061s _1_1_1061_1061 Q5TH69 Q5TH69 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13283.13283.3 28.08 28.08 9.44 4 1 1 0 982.1049 2864.3318 S1061s TMT10 1046 (K) ATGSAGLLGDPECEGsPPEHSPEQGR (S) AT(0.0)GS(0.0)AGLLGDPECEGS(0.99)PPEHS(0.0)PEQGR C:Carbamidomethylation,s:Phosphorylated S ARFGEF3 244013.5 2 5 618.1 260.46 HUMAN 1 7.0437 -7.7092 GDPEEEDSQAETKSL-p O75410;S44-p GDPEEEDSQAETKSL 0.265368066946808 0.741251885015411 -0.201666666666667 0.0593333333333333 10.9272692399515 1.79278665560287 -0.201666666666667 0.0593333333333333 0.0807742763696697 0.661791728004133 -2.14337231994622 0.462356242555293 O75410 TACC1 O75410.S44.p_TACC1 O75410_S44s _1_1_44_44 O75410 O75410-2|O75410-6 Transforming acidic coiled-coil-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8743.8743.3 22.69 22.69 6.225 2 1 1 0 1024.1078 2990.3387 S44s TMT10 24 (R) GGAAGEDEAGGPEGDPEEEDsQAETK (S) GGAAGEDEAGGPEGDPEEEDS(0.99)QAET(0.0)K K:TMT10,s:Phosphorylated S TACC1 88648.6 2 3 442.1 311.73 HUMAN 1 -10.9273 1.7928 GDPFGFDSDDESLPV-p Q7Z5K2-2;S120-p GDPFGFDSDDESLPV 0.247048592039774 0.0840621276807936 -0.197333333333333 0.268666666666667 11.6005344625998 14.2371804042797 -0.197333333333333 0.268666666666667 0.0691745836282499 0.0376948448025531 -2.26167427014137 2.73489567375168 Q7Z5K2 WAPL Q7Z5K2.2.S120.p_WAPL Q7Z5K2-2_S120s _1_1_120_120 Q7Z5K2-2 Q7Z5K2-3|Q7Z5K2-2 Isoform 2 of Wings apart-like protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26477.26477.2 25.78 24.52 3.301 6 1 1 0 1556.2007 3031.4308 S120s TMT10 107 (K) VEEESTGDPFGFDsDDESLPVSSK (N) VEEES(0.0)T(0.0)GDPFGFDS(0.99)DDES(0.0)LPVS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S WAPL 138966.1 6 1 244.1 413.16 HUMAN 1 -11.6005 14.2372 GDPRANASPQKPLDL-p Q9Y618;S956-p GDPRANASPQKPLDL 0.292023616260519 0.00326766235965598 -0.161333333333333 -0.76 10.0822940959549 37.2536243180721 -0.161333333333333 -0.76 0.0981229486228234 0.000188207778341332 -1.99601145895596 -8.96209584942919 Q9Y618 NCOR2 Q9Y618.S956.p_NCOR2 Q9Y618_S956s _1_1_956_956 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15806.15806.2 15.37 11.55 99 1 1 1 0 1025.0896 1969.2049 S956s TMT10 953 (R) ANAsPQKPLDLK (Q) ANAS(1.0)PQKPLDLK K:TMT10,s:Phosphorylated S NCOR2 275540.8 7 11 16.1 1053.89 HUMAN 1 -10.0823 -37.2536 GDPWKEETDTDLEVV-p Q1ED39;T308-p GDPWKEETDTDLEVV 0.549966652418693 0.124165409708268 -0.102333333333333 -0.171333333333333 4.78935825617731 11.9527051626346 -0.102333333333333 -0.171333333333333 0.331943504216592 0.0637866044137449 -1.06531165055582 -2.32279500553962 Q1ED39 KNOP1 Q1ED39.T308.p_KNOP1 Q1ED39_T308t _1_1_308_308 Q1ED39 Q1ED39 Lysine-rich nucleolar protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27728.27728.4 16.57 16.57 1.101 3 1 1 0 829.1732 3233.7032 T308t TMT10 296 (K) ESGVAGDPWKEEtDTDLEVVLEK (K) ES(0.0)GVAGDPWKEET(0.99)DT(0.0)DLEVVLEK K:TMT10,t:Phosphorylated T KNOP1 51759.2 2 8 660.1 251.7 HUMAN 1 -4.7894 -11.9527 GDQGVDQSPKPLIIG-p O15085-2;S326-p GDQGVDQSPKPLIIG 0.306383440584975 0.0559737728081242 -0.257333333333333 -0.410333333333333 9.62369060199332 16.6802019565637 -0.257333333333333 -0.410333333333333 0.109051323260077 0.0214773059757337 -1.91640019962201 -3.19753109317733 O15085 ARHGEF11 O15085.2.S326.p_ARHGEF11 O15085-2_S326s _1_1_326_326 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34254.34254.5 21.18 16.6 1.608 7 1 1 0 1193.38 5882.9016 S326s TMT10 309 (R) QGSDAAVPSTGDQGVDQsPKPLIIGPEEDYDPGYFNNESDIIFQDLEK (L) QGS(0.0)DAAVPS(0.0)T(0.0)GDQGVDQS(0.99)PKPLIIGPEEDY(0.0)DPGY(0.0)FNNES(0.0)DIIFQDLEK K:TMT10,s:Phosphorylated S ARHGEF11 173153.4 1 7 228.1 424.05 HUMAN 1 -9.6237 -16.6802 GDQKGKASPFEEDQN-p Q8TB72;S136-p GDQKGKASPFEEDQN 0.373935912464191 0.27830199100845 -0.151333333333333 0.178666666666667 7.90965178743465 7.31909439131086 -0.151333333333333 0.178666666666667 0.161820977873183 0.185391816974167 -1.61948360967948 1.51632321592954 Q8TB72 PUM2 Q8TB72.S136.p_PUM2 Q8TB72_S136s _1_1_136_136 Q8TB72 Q8TB72|Q8TB72-3|Q8TB72-4|Q8TB72-2|A0A0A0MR59 Pumilio homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10882.10882.3 15.36 15.36 99 1 1 1 0 834.439 2421.3341 S136s TMT10 133 (K) GKAsPFEEDQNRDLK (Q) GKAS(1.0)PFEEDQNRDLK K:TMT10,s:Phosphorylated S PUM2 114784.2 9 4 944.1 197.75 HUMAN 1 -7.9097 7.3191 GDQPAARTPRSKKKK-p E7ETY2;T1358-p GDQPAARTPRSKKKK 0.148303739525478 0.0115640217873684 0.275333333333333 -0.445666666666667 16.7270079058087 27.1017177296261 0.275333333333333 -0.445666666666667 0.0212470778622762 0.00194907354608356 3.20905833134308 -5.58878735354876 E7ETY2 TCOF1 E7ETY2.T1358.p_TCOF1 E7ETY2_T1358t _1_1_1358_1358 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5242.5242.3 9.99 6.3 3.559 2 1 1 0 526.6053 1497.8335 T1358t TMT10 1349 (K) LSGDQPAARtPR (S) LS(0.0)GDQPAART(0.99)PR t:Phosphorylated T TCOF1 152529.5 2 33 19.1 1034.65 HUMAN 1 16.727 -27.1017 GDQQYLFSPSREMPT-p Q9BVV6-3;S781-p GDQQYLFSPSREMPT 0.621652419131811 0.214427967317373 0.083 -0.255333333333333 3.83882985776207 8.79750451734882 0.083 -0.255333333333333 0.413158806523522 0.131901443460739 0.886193669594973 -1.77268858353827 Q9BVV6 KIAA0586 Q9BVV6.3.S781.p_KIAA0586 Q9BVV6-3_S781s _1_1_781_781 Q9BVV6-3 Q9BVV6-3|Q9BVV6-4 Isoform 3 of Protein TALPID3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16939.16939.4 16.25 16.25 1.641 4 1 1 0 619.0613 2393.2563 S781s TMT10 766 (K) HSVPVLPHGDQQYLFsPSR (E) HS(0.0)VPVLPHGDQQY(0.0)LFS(0.99)PS(0.0)R s:Phosphorylated S KIAA0586 183368.4 1 5 1314.1 155.12 HUMAN 1 3.8388 -8.7975 GDQRLAQSAEMYHYQ-p Q5SPY9;S323-p GDQRLAQSAEMYHYQ 0.141557816596311 0.0816670960840204 -0.246 -0.303666666666667 17.3537213126136 14.420736162472 -0.246 -0.303666666666667 0.018391953859708 0.0361348606086522 -3.33263123716837 -2.76877739995361 Q5SPY9 NotFound Q5SPY9.S323.p_NotFound Q5SPY9_S323s _1_1_323_323 Q5SPY9 Q5SPY9|Q9NQX5 Neural proliferation differentiation and control protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8127.8127.3 19.96 19.96 4.952 3 1 1 0 690.9852 1990.9755 S323s TMT10 320 (R) LAQsAEMYHYQHQR (Q) LAQS(0.99)AEMY(0.0)HY(0.0)QHQR s:Phosphorylated S NPDC1 43434.2 2 3 1634.1 125.02 HUMAN 1 -17.3537 -14.4207 GDQVLNFSDAEDLID-p Q96EZ8;S282-p GDQVLNFSDAEDLID 0.389940592205609 0.354283964218025 -0.155 -0.118333333333333 7.56729775868502 5.97500418842721 -0.155 -0.118333333333333 0.175093580662896 0.25263852736317 -1.55999490935976 -1.27980622208854 Q96EZ8 MCRS1 Q96EZ8.S282.p_MCRS1 Q96EZ8_S282s_1_1_282_282 Q96EZ8 Q96EZ8-2|Q96EZ8-3|Q96EZ8-4 Microspherule protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.34421.34421.3 24.52 24.57 6.145 5 1 1 0 1522.4406 4484.3328 N280n S282s TMT10 260 (K) QYYLLEDQTVQPLPKGDQVLnFsDAEDLIDDSK (L) QY(0.0)Y(0.0)LLEDQT(0.0)VQPLPKGDQVLN(1.0)FS(0.99)DAEDLIDDS(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S MCRS1 52030.6 11 5 892.1 204.48 HUMAN 1 -7.5673 -5.975 GDRGEVDSNGSDGGE-p Q7LBC6;S311-p GDRGEVDSNGSDGGE 0.221426154409158 0.18366442187649 0.193666666666667 0.134333333333333 12.6097104750161 9.67922977245103 0.193666666666667 0.135260941186705 0.0548313517347245 0.10766561432237 2.44097089844435 1.92528098055622 Q7LBC6 KDM3B Q7LBC6.S311.p_KDM3B Q7LBC6_S311sS314s_2_2_311_314 Q7LBC6 Q7LBC6 Lysine-specific demethylase 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13121.13121.5 12.73 12.73 5.965 3 2 2 0 665.3198 3161.6543 S311s N312n S314s TMT10 302 (K) LKGDRGEVDsnGsDGGEASRGPWK (G) LKGDRGEVDS(0.99)N(1.0)GS(0.99)DGGEAS(0.0)RGPWK K:TMT10,s:Phosphorylated S,n:Deamidated KDM3B 193289 14 21 305.1 374.1 HUMAN 1 12.6097 9.6792 GDRKGAGSLELPAWV-p A6NDB9;S260-p GDRKGAGSLELPAWV 0.153159090763807 0.174073038701996 -0.251 0.145666666666667 16.3871052802045 9.98460352558386 -0.251 0.145666666666667 0.0229767961911062 0.100355146079269 -3.14287590026576 1.97823708563866 A6NDB9 PALM3 A6NDB9.S260.p_PALM3 A6NDB9_S260s _1_1_260_260 A6NDB9 A6NDB9 Paralemmin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24734.24734.3 14.82 10.04 99 1 1 1 0 708.4119 2043.257 S260s TMT10 256 (R) KGAGsLELPAWVK (E) KGAGS(1.0)LELPAWVK K:TMT10,s:Phosphorylated S PALM3 72036.5 3 4 888.1 205.52 HUMAN 1 -16.3871 9.9846 GDRKKRRTRSRSPES-p O95218-2;T303-p GDRKKRRTRSRSPES 0.829514559316201 0.00687614048228366 0.042 0.702 1.56227710121023 31.0138179736017 0.042 0.702 0.697866401475323 0.000791804932143613 0.40952461287449 6.73545535664156 O95218 ZRANB2 O95218.2.T303.p_ZRANB2 O95218-2_T303tS305sS307s_3_3_303_307 O95218-2 O95218-2 Isoform 2 of Zinc finger Ran-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5863.5863.5 11.47 10.67 1.192 5 3 3 0 632.1267 2916.7058 T303t S305s S307s TMT10 300 (K) KRRtRsRsPESQVIGENTK (Q) KRRT(0.99)RS(0.99)RS(0.99)PES(0.0)QVIGENT(0.0)K K:TMT10,t:Phosphorylated T,s:Phosphorylated S ZRANB2 36774.1 8 10 212.1 438.05 HUMAN 1 1.5623 31.0138 GDRNSVGSEGSVGSI-p Q8WXE0;S406-p GDRNSVGSEGSVGSI 0.79382020749629 0.0509012795530668 -0.0446666666666667 -0.227666666666667 1.93527960412258 17.2730517104102 -0.0446666666666667 -0.227666666666667 0.640430548536582 0.0187367744542549 -0.494421058224822 -3.31403352027901 Q8WXE0 CASKIN2 Q8WXE0.S406.p_CASKIN2 Q8WXE0_S403sS406s_2_2_403_406 Q8WXE0 Q8WXE0|Q8WXE0-2 Caskin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16239.16552.3 11.48 8.35 1.113 6 2 2 0 930.4281 2629.3379 S403s S406s TMT10 390 (R) VGLSPDSPAGDRNsVGsEGSVGSIR (S) VGLS(0.0)PDS(0.0)PAGDRNS(0.99)VGS(0.99)EGS(0.0)VGS(0.0)IR s:Phosphorylated S CASKIN2 127351.5 1 14 984.1 192.08 HUMAN 1 -1.9353 -17.2731 GDRQRFYSDSHHLKR-p Q92576;S1925-p GDRQRFYSDSHHLKR 0.400435676575859 0.00897369968167821 -0.157666666666667 -1.07433333333333 7.33403934319522 28.9961908803867 -0.157666666666667 -1.07433333333333 0.184754942654507 0.00126003007723926 -1.51936759547569 -6.12315112831161 Q92576 PHF3 Q92576.S1925.p_PHF3 Q92576_S1925s _1_1_1925_1925 Q92576 Q92576|Q92576-2 PHD finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3954.3954.4 9.48 9.48 9.479 3 1 1 0 400.4475 1518.8015 S1925s Hydrogen 1923 (R) FYsDSHHLKR (E) FY(0.0)S(0.99)DS(0.0)HHLKR K:TMT10-Lys-Only,s:Phosphorylated S PHF3 231702.4 1 18 96.1 606.54 HUMAN 1 -7.334 -28.9962 GDRRRSNTLDIMDGR-p O94915;T1959-p GDRRRSNTLDIMDGR 0.79627974379518 0.466776537445169 -0.055 -0.0923333333333333 1.91273799005054 4.4115747288261 -0.055 -0.0923333333333334 0.64376327988501 0.362111674831054 -0.489389333987169 -0.994847814341227 O94915 FRYL O94915.T1959.p_FRYL O94915_T1959t _1_1_1959_1959 O94915 O94915 Protein furry homolog-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15898.15898.2 13.97 8.87 2.463 2 1 1 0 715.8303 1350.6885 T1959t TMT10 1957 (R) SNtLDIMDGR (I) S(0.0)NT(0.99)LDIMDGR t:Phosphorylated T FRYL 342387.4 7 9 526.1 282.44 HUMAN 1 -1.9127 -4.4116 GDRSGGGYGGDRGGG-p Q92804;Y455-p GDRSGGGYGGDRGGG 0.272925101260209 0.0481854795612809 -0.298333333333333 -0.328 10.6800913807424 17.6113420979875 -0.298333333333333 -0.328 0.0855048721449782 0.0173326828398286 -2.10015387357143 -3.38133791945599 Q92804 TAF15 Q92804.Y455.p_TAF15 Q92804_Y455y _1_1_455_455 Q92804 Q92804|Q92804-2 TATA-binding protein-associated factor 2N GG20160819_MSz_CCLE_T4D7_pY_Injection_01.4507.4507.3 15.29 6.99 1.46 3 1 1 0 618.5979 1773.8102 Y455y TMT10 451 (R) SGGGyGGDRGGGYGGDR (G) S(0.0)GGGY(0.99)GGDRGGGY(0.0)GGDR y:Phosphorylated Y TAF15 62057.1 2 3 65.1 36.31 HUMAN 1 -10.6801 -17.6113 GDRSGYSSPGSPGTP-p P10636;S516-p GDRSGYSSPGSPGTP 0.654716738150019 0.0103746804127274 0.0853333333333333 0.473333333333333 3.44706877319258 27.8532037292807 0.0853333333333333 0.473333333333333 0.45216102293092 0.00163937997948836 0.809841988687363 5.79629777129629 P10636 MAPT P10636.S516.p_MAPT P10636_S515sS516sS519s_3_3_515_519 P10636 P10636-8|P10636-7|P10636-5|P10636-6|P10636-4|P10636-2|P10636-9|A0A0G2JMX7|A0A0G2JS76|A0A0G2JPD5|A0A0G2JQJ7|I3L170|P10636-3 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8032.8032.2 7.09 7.09 1.622 7 3 3 0 931.8513 1622.7972 S515s S516s S519s TMT10 512 (R) SGYssPGsPGTPGSR (S) S(0.0)GY(0.0)S(0.99)S(0.99)PGS(0.99)PGT(0.0)PGS(0.0)R s:Phosphorylated S MAPT 79154.4 7 34 119.1 551.6 HUMAN 1 3.4471 27.8532 GDRSHLDSPEAREAM-p Q9BTD8;S135-p GDRSHLDSPEAREAM 0.314605425744953 0.468627341898545 0.177 0.157333333333333 9.3957865802203 4.38763755706627 0.177 0.157333333333333 0.114926807282579 0.364113049783421 1.87690027797813 0.990358892437517 Q9BTD8 RBM42 Q9BTD8.S135.p_RBM42 Q9BTD8_S135s _1_1_135_135 Q9BTD8 Q9BTD8|K7EP90|Q9BTD8-3|Q9BTD8-2 RNA-binding protein 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4760.4760.2 14.33 14.33 4.759 2 1 1 0 660.8114 1240.6483 S135s TMT10 131 (R) SHLDsPEAR (E) S(0.0)HLDS(0.99)PEAR s:Phosphorylated S RBM42 50527.2 2 2 4006.1 39.25 HUMAN 1 9.3958 4.3876 GDRWRSASPDGGPRS-p O75420;S230-p GDRWRSASPDGGPRS 0.0507410919483046 0.0679676595993386 0.600666666666667 0.291 28.4532295548398 15.5343097468164 0.600666666666667 0.291 0.00142783178153223 0.0279620511179197 5.97497499666841 2.97724678058225 O75420 GIGYF1 O75420.S230.p_GIGYF1 O75420_S230s _1_1_230_230 O75420 O75420 GRB10-interacting GYF protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4311.4311.2 13.77 13.77 1.381 2 1 1 0 576.7667 1072.5585 S230s TMT10 228 (R) SAsPDGGPR (S) S(0.0)AS(0.99)PDGGPR s:Phosphorylated S GIGYF1 115112.8 2 4 1679.1 121.41 HUMAN 1 28.4532 15.5343 GDSCSLGTPPGQGPQ-p Q08334;T317-p GDSCSLGTPPGQGPQ 0.885820345057877 0.837128948953312 -0.03 0.048 1.03796220671134 1.08432693649979 -0.03 0.048 0.787415173380437 0.779053541824211 -0.283373925782244 0.294869831993847 Q08334 IL10RB Q08334.T317.p_IL10RB Q08334_T317t _1_1_317_317 Q08334 Q08334 Interleukin-10 receptor subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10949.10949.3 11.68 11.68 2.335 4 1 1 0 731.6538 2112.9818 T317t TMT10 307 (K) QNPGDSCSLGtPPGQGPQS (-) QNPGDS(0.0)CS(0.0)LGT(0.99)PPGQGPQS(0.0) C:Carbamidomethylation,t:Phosphorylated T IL10RB 37564.9 3 2 3988.1 39.64 HUMAN 1 -1.038 1.0843 GDSMSPDSDTELRSQ-p Q8TF40;S763-p GDSMSPDSDTELRSQ 0.287785082952937 0.795997888450574 0.406666666666667 0.0416666666666667 10.2014313717507 1.38389257154506 0.406666666666667 0.0416666666666667 0.0954677886151174 0.727127789399896 2.01672872172823 0.367544402922115 Q8TF40 FNIP1 Q8TF40.S763.p_FNIP1 Q8TF40_S763s _1_1_763_763 Q8TF40 Q8TF40|Q8TF40-3|J3KNG8|A0A087WX11 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.30449.30449.4 18.28 15.48 2.295 7 1 1 0 848.1683 3309.6834 S763s TMT10 751 (K) VTFLIGDSMSPDsDTELRSQAVVDQITR (H) VT(0.0)FLIGDS(0.0)MS(0.0)PDS(0.99)DT(0.0)ELRS(0.0)QAVVDQIT(0.0)R s:Phosphorylated S FNIP1 132549.9 1 20 310.1 372.19 HUMAN 1 10.2014 1.3839 GDTGNWYSSDEDEGG-p Q9UPT8;S807-p GDTGNWYSSDEDEGG 0.512739424025493 0.0610999358357444 0.0863333333333333 0.296 5.36110674746259 16.1668330606801 0.0863333333333333 0.296 0.290997545118329 0.0241722286642929 1.16984039760401 3.09807241935308 Q9UPT8 ZC3H4 Q9UPT8.S807.p_ZC3H4 Q9UPT8_S807sS808s_2_2_807_808 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22380.22591.4 16.46 16.46 1.206 10 2 2 0 1192.5414 4607.2112 S807s S808s TMT10 787 (R) LAESSKQDRENEEGDTGNWYssDEDEGGSSVTSILK (T) LAES(0.0)S(0.0)KQDRENEEGDT(0.0)GNWY(0.0)S(0.99)S(0.99)DEDEGGS(0.0)S(0.0)VT(0.0)S(0.0)ILK K:TMT10,s:Phosphorylated S ZC3H4 140881.7 15 14 427.1 318.7 HUMAN 1 5.3611 16.1668 GDTPAQASPPEEKVP-p Q6ZUM4;S466-p GDTPAQASPPEEKVP 0.181399305482146 0.117522527941878 -0.216666666666667 -0.228 14.6051082424596 12.2600255187409 -0.216666666666667 -0.228 0.0346329252677906 0.0594288666620233 -2.80471177451642 -2.37732602389136 Q6ZUM4 ARHGAP27 Q6ZUM4.S466.p_ARHGAP27 Q6ZUM4_S466s _1_1_466_466 Q6ZUM4 Q6ZUM4|A0A0G2JNY3|Q6ZUM4-3|Q6ZUM4-2|A0A0C4DGE6 Rho GTPase-activating protein 27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26544.26544.5 24.26 19.04 1.15 7 1 1 0 915.843 4495.2153 S466s TMT10 455 (K) SSQDGDTPAQAsPPEEKVPAELDEVGSWEEVSPATAAVR (T) S(0.0)S(0.0)QDGDT(0.0)PAQAS(0.99)PPEEKVPAELDEVGS(0.0)WEEVS(0.0)PAT(0.0)AAVR K:TMT10,s:Phosphorylated S ARHGAP27 99078.8 4 8 467.1 303.27 HUMAN 1 -14.6051 -12.26 GDTPGHATPGHGGAT-p O75533;T278-p GDTPGHATPGHGGAT 0.207422631751664 0.989079974009455 0.381333333333333 -0.00233333333333332 13.1880011012147 0.0716090508823973 0.381333333333333 -0.00233333333333329 0.047995430323277 0.98364659947996 2.54499955350275 -0.0214596442546298 O75533 SF3B1 O75533.T278.p_SF3B1 O75533_T267tT273tT278t_3_3_267_278 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11893.11893.5 17.57 17.57 1.224 9 3 3 0 803.9568 3775.8487 T267t T273t T278t TMT10 253 (K) IWDPTPSHTPAGAAtPGRGDtPGHAtPGHGGATSSAR (K) IWDPT(0.0)PS(0.0)HT(0.0)PAGAAT(0.99)PGRGDT(0.99)PGHAT(0.99)PGHGGAT(0.0)S(0.0)S(0.0)AR t:Phosphorylated T SF3B1 146569.5 2 46 53.1 735.77 HUMAN 1 13.188 -0.0716 GDTQSIQSSRTGPDE-p Q9P206-3;S107-p GDTQSIQSSRTGPDE 0.401454832845887 0.404441097732141 0.174 -0.119 7.31593351703226 5.23143349033571 0.174 -0.119 0.185526797627323 0.299817273873346 1.51621021363472 -1.14606453610805 Q9P206 KIAA1522 Q9P206.3.S107.p_KIAA1522 Q9P206-3_S104sS107s_2_2_104_107 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8265.8265.3 9.94 9.94 1.114 4 2 2 0 673.9428 1859.8834 S104s S107s TMT10 95 (K) GGWDHGDTQsIQsSR (T) GGWDHGDT(0.0)QS(0.99)IQS(0.99)S(0.0)R s:Phosphorylated S KIAA1522 108782.6 1 41 62.1 704.36 HUMAN 1 7.3159 -5.2314 GDVDVSDSDDEDDNL-p Q9NYV6;S172-p GDVDVSDSDDEDDNL 0.757838648247001 0.4327885548442 -0.048 -0.0773333333333333 2.30534329530435 4.8459942233628 -0.048 -0.0773333333333333 0.588119623410726 0.327642761489236 -0.575408803869914 -1.07554696350603 Q9NYV6 RRN3 Q9NYV6.S172.p_RRN3 Q9NYV6_S170sS172s_2_2_170_172 Q9NYV6 Q9NYV6|H3BMT1|F5H148|Q9NYV6-3|Q9NYV6-4|Q9NYV6-2 RNA polymerase I-specific transcription initiation factor RRN3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22224.22224.5 17.35 17.35 7.665 3 2 2 0 782.5474 3748.7649 S170s S172s TMT10 160 (R) VIIKEGDVDVsDsDDEDDNLPANFDTCHR (A) VIIKEGDVDVS(0.99)DS(0.99)DDEDDNLPANFDT(0.0)CHR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RRN3 74904.7 9 3 2705.1 73.33 HUMAN 1 -2.3053 -4.846 GDVEGSQSQDEGEGS-p Q9UQE7;S1067-p GDVEGSQSQDEGEGS 0.766826613009525 0.00800154933185789 0.041 0.479333333333333 2.20827465394165 29.8872897590021 0.041 0.479333333333333 0.601412616594687 0.0010262921903028 0.554447412058108 6.38782932673373 Q9UQE7 SMC3 Q9UQE7.S1067.p_SMC3 Q9UQE7_S1067s _1_1_1067_1067 Q9UQE7 Q9UQE7 Structural maintenance of chromosomes protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18984.18984.4 26.15 19.95 2.234 10 1 1 0 1074.2249 4213.9191 S1067s TMT10 1060 (K) GDVEGSQsQDEGEGSGESERGSGSQSSVPSVDQFTGVGIR (V) GDVEGS(0.0)QS(0.99)QDEGEGS(0.0)GES(0.0)ERGS(0.0)GS(0.0)QS(0.0)S(0.0)VPS(0.0)VDQFT(0.0)GVGIR s:Phosphorylated S SMC3 141938.5 5 4 1472.1 139.47 HUMAN 1 2.2083 29.8873 GDVTDADSEADENEQ-p Q8TEU7;S1590-p GDVTDADSEADENEQ 0.776104738768784 0.881783171646862 0.074 0.015 2.11042998354579 0.766968066077478 0.074 0.015 0.615115968680469 0.838114189406246 0.53312100698205 0.214337516663886 Q8TEU7 RAPGEF6 Q8TEU7.S1590.p_RAPGEF6 Q8TEU7_S1590s _1_1_1590_1590 Q8TEU7 E9PCH4|Q8TEU7-4 Rap guanine nucleotide exchange factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21634.21634.2 17.81 17.81 4.111 3 1 1 0 1187.015 2293.0517 S1590s TMT10 1582 (K) LGDVTDADsEADENEQVSAV (-) LGDVT(0.0)DADS(0.99)EADENEQVS(0.0)AV s:Phosphorylated S RAPGEF6 180960.1 2 18 795.1 224.05 HUMAN 1 2.1104 0.767 GDVTEIKSPILSGPK-p Q9UPX8-3;S1613-p GDVTEIKSPILSGPK 0.158297715435374 0.0231818205637487 -0.227333333333333 -0.313666666666667 16.0497689047703 22.3175601413179 -0.227333333333333 -0.313666666666667 0.0248326524040365 0.00586467548408291 -3.07775227177776 -4.39019830003761 Q9UPX8 SHANK2 Q9UPX8.3.S1613.p_SHANK2 Q9UPX8-3_S1613s _1_1_1613_1613 Q9UPX8-3 Q9UPX8-3 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28599.28599.4 17.22 17.22 3.347 3 1 1 0 652.6245 2527.5103 S1613s TMT10 1604 (K) LWGDVTEIKsPILSGPK (A) LWGDVT(0.0)EIKS(0.99)PILS(0.0)GPK K:TMT10,s:Phosphorylated S SHANK2 202341.2 2 26 86.1 628.23 HUMAN 1 -16.0498 -22.3176 GDYEFLKSWTVEDLQ-p Q13043;S438-p GDYEFLKSWTVEDLQ 0.102352192860263 0.725422343780879 -0.421333333333333 0.043 20.9423095944385 1.91868350938628 -0.421333333333333 0.043 0.00804950251772212 0.642882566810842 -4.08416232693473 0.49066152713757 Q13043 STK4 Q13043.S438.p_STK4 Q13043_S438s _1_1_438_438 Q13043 Q13043|F5H5B4 Serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21488.21488.3 12.1 9.76 1.832 2 1 1 0 548.6204 1563.8783 S438s TMT10 438 (K) sWTVEDLQK (R) S(0.99)WT(0.0)VEDLQK K:TMT10,s:Phosphorylated S STK4 55857.4 2 3 1088.2 179.29 HUMAN 1 -20.9423 1.9187 GEAAETDSEPEPEPE-p Q6QNY0;S65-p GEAAETDSEPEPEPE 0.49807304671179 0.0194084795868734 0.116 0.352 5.57787948885972 23.520657570417 0.116 0.352 0.276829297808313 0.00444563950418874 1.20898288775748 4.67321245038955 Q6QNY0 BLOC1S3 Q6QNY0.S65.p_BLOC1S3 Q6QNY0_S65s _1_1_65_65 Q6QNY0 Q6QNY0 Biogenesis of lysosome-related organelles complex 1 subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12237.12237.2 22.53 22.53 2.628 3 1 1 0 1330.1088 2579.231 S65s TMT10 56 (R) VAGEAAETDsEPEPEPEPTAAPR (D) VAGEAAET(0.0)DS(0.99)EPEPEPEPT(0.0)AAPR s:Phosphorylated S BLOC1S3 21369.4 3 1 4375.1 32.5 HUMAN 1 5.5779 23.5207 GEADREVSEISIVDI-p Q14789-2;S530-p GEADREVSEISIVDI 0.229401753870038 0.060088054548775 0.211333333333333 -0.458666666666667 12.2871655359143 16.2711359913623 0.211333333333333 -0.458666666666667 0.0590586406228675 0.0235986087967368 2.38337575284712 -3.11817613356887 Q14789 GOLGB1 Q14789.2.S530.p_GOLGB1 Q14789-2_S530s _1_1_530_530 Q14789-2 Q14789-2 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19898.19898.4 14.72 11.93 3.268 3 1 1 0 685.8657 2660.4619 S530s TMT10 522 (R) TGEADREVsEISIVDIANKR (S) T(0.0)GEADREVS(0.99)EIS(0.0)IVDIANKR K:TMT10,s:Phosphorylated S GOLGB1 378557.2 1 6 93.1 610.98 HUMAN 1 12.2872 -16.2711 GEAEARPSPSTTPLP-p Q5SYE7-2;S1177-p GEAEARPSPSTTPLP 0.131539706649705 0.0270278748422748 0.281 0.381333333333333 18.1895454171853 21.2819703541763 0.281 0.381333333333333 0.0151720916780062 0.00744394172483977 3.50072766627707 4.15542668203609 Q5SYE7 NHSL1 Q5SYE7.2.S1177.p_NHSL1 Q5SYE7-2_S1177s _1_1_1177_1177 Q5SYE7-2 Q5SYE7|Q5SYE7-2 Isoform 2 of NHS-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11486.11486.3 13.19 6.63 1.455 9 1 1 0 1005.8116 2935.4595 S1177s TMT10 1163 (R) SPGAPSAGEAEARPsPSTTPLPDSSPSR (K) S(0.0)PGAPS(0.0)AGEAEARPS(0.99)PS(0.0)T(0.0)T(0.0)PLPDS(0.0)S(0.0)PS(0.0)R s:Phosphorylated S NHSL1 171957.1 1 12 747.1 232.6 HUMAN 1 18.1895 21.282 GEAGGPLTPRRVSSD-p P50548;T526-p GEAGGPLTPRRVSSD 0.0412311366109555 0.0129609129228376 -0.677333333333333 -0.693666666666667 30.9102508338339 26.2811585652879 -0.677333333333333 -0.693666666666667 0.00081091422083299 0.00235442111233035 -6.71392156161968 -5.36859340866562 P50548 ERF P50548.T526.p_ERF P50548_T526t _1_1_526_526 P50548 P50548|P50548-2 ETS domain-containing transcription factor ERF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7415.7415.4 20.93 21.09 99 1 1 1 0 554.8047 2136.229 T526t TMT10 512 (K) KVRGEGPGEAGGPLtPR (R) KVRGEGPGEAGGPLT(1.0)PR K:TMT10,t:Phosphorylated T ERF 59044.2 4 9 1246.1 162.15 HUMAN 1 -30.9103 -26.2812 GEAKPEPSPSPRITR-p P26358;S152-p GEAKPEPSPSPRITR 0.852742978991457 0.00626582857597616 0.028 -0.746333333333333 1.34093145391329 31.7379054435729 0.028 -0.746333333333333 0.734356350048478 0.00067020776561118 0.357338849235025 -6.96692005915056 P26358 DNMT1 P26358.S152.p_DNMT1 P26358_S152s _1_1_152_152 P26358 P26358 DNA (cytosine-5)-methyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5535.5535.3 12.9 12.9 1.963 4 1 1 0 812.7637 2356.3076 S152s TMT10 141 (R) SKSDGEAKPEPsPSPR (I) S(0.0)KS(0.0)DGEAKPEPS(0.99)PS(0.0)PR K:TMT10,s:Phosphorylated S DNMT1 185501.2 1 4 431.1 316.29 HUMAN 1 1.3409 -31.7379 GEAQDAESDLVDGRH-p O60256;S219-p GEAQDAESDLVDGRH 0.199306780118349 0.135545012429832 0.195 0.157666666666667 13.6347778232308 11.4392611157404 0.195 0.157666666666667 0.0433034220375698 0.0717916423153054 2.62610428735259 2.23219815474387 O60256 PRPSAP2 O60256.S219.p_PRPSAP2 O60256_S219s _1_1_219_219 O60256 O60256|O60256-2|O60256-3|O60256-4 Phosphoribosyl pyrophosphate synthase-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20928.20928.3 11.37 11.37 1.195 2 1 1 0 1093.5448 3198.6527 S219s TMT10 205 (R) LGIAVIHGEAQDAEsDLVDGRHSPPMVR (S) LGIAVIHGEAQDAES(0.99)DLVDGRHS(0.0)PPMVR s:Phosphorylated S PRPSAP2 41324.4 7 4 2642.1 75.43 HUMAN 1 13.6348 11.4393 GEAQERRSPTVEPST-p Q9BY89;S1224-p GEAQERRSPTVEPST 0.573825603803224 0.998012344342659 0.0823333333333333 -0.000333333333333334 4.439565997478 0.0115336347063116 0.0823333333333333 -0.000333333333333362 0.359785287701047 0.99734780576388 1.00027444982587 -0.00348001672689618 Q9BY89 KIAA1671 Q9BY89.S1224.p_KIAA1671 Q9BY89_S1224s _1_1_1224_1224 Q9BY89 Q9BY89 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8913.8913.3 11.3 11.3 1.265 4 1 1 0 550.2929 1568.8958 S1224s TMT10 1223 (R) RsPTVEPSTLPR (E) RS(0.99)PT(0.0)VEPS(0.0)T(0.0)LPR s:Phosphorylated S KIAA1671 197734.4 7 17 105.1 590.35 HUMAN 1 4.4396 -0.0115 GEAWPFESV______-p Q9Y3X0;S530-p GEAWPFESV______ 0.302068454531195 0.643340483964696 0.190666666666667 0.0466666666666667 9.74241819668198 2.61092117033062 0.190666666666667 0.0466666666666667 0.106110455866225 0.548160683702742 1.93699242071689 0.640130681945455 Q9Y3X0 CCDC9 Q9Y3X0.S530.p_CCDC9 Q9Y3X0_S530s _1_1_530_530 Q9Y3X0 Q9Y3X0 Coiled-coil domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30013.30013.3 21.1 21.1 5.189 4 1 1 0 760.371 2199.1284 S530s TMT10 513 (R) TTHLAGALSPGEAWPFEsV (-) T(0.0)T(0.0)HLAGALS(0.0)PGEAWPFES(0.99)V s:Phosphorylated S CCDC9 59816.1 1 8 2003.1 103.17 HUMAN 1 9.7424 2.6109 GEAYRSLSDPIPQRH-p Q96PE2;S735-p GEAYRSLSDPIPQRH 0.404577762556746 0.0691984798957248 0.142666666666667 0.233666666666667 7.25682019942126 15.4229260573814 0.142666666666667 0.233666666666667 0.188069331159498 0.028688470461576 1.50589757200138 2.95615798804137 Q96PE2 ARHGEF17 Q96PE2.S735.p_ARHGEF17 Q96PE2_S735s _1_1_735_735 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13618.13824.2 9.94 4.16 2.399 2 1 1 0 661.3396 1241.7051 S735s TMT10 733 (R) SLsDPIPQR (H) S(0.0)LS(0.99)DPIPQR s:Phosphorylated S ARHGEF17 223779.6 3 23 30.1 908.19 HUMAN 1 7.2568 15.4229 GECSGEQSPDTNYEP-p P49454;S1822-p GECSGEQSPDTNYEP 0.138989787666189 0.00899192020645995 -0.827333333333333 -0.475666666666667 17.5521925434289 28.9692649962403 -0.827333333333334 -0.475666666666667 0.0175703634707841 0.00126786642251791 -3.3721979077367 -6.11529038380974 P49454 CENPF P49454.S1822.p_CENPF P49454_S1822s _1_1_1822_1822 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15562.15562.3 21.35 16.86 2.162 7 1 1 0 1320.9579 3880.9002 S1822s TMT10 1805 (K) ITETGAVKPTGECSGEQsPDTNYEPPGEDK (T) IT(0.0)ET(0.0)GAVKPT(0.0)GECS(0.0)GEQS(0.99)PDT(0.0)NY(0.0)EPPGEDK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CENPF 371067.2 4 21 47.1 771.73 HUMAN 1 -17.5522 -28.9693 GEDAGAESNEEAPGE-p Q8N8A6;S103-p GEDAGAESNEEAPGE 0.659595024833796 0.0841459915978189 0.127666666666667 -0.301666666666667 3.3891563825697 14.2304321874558 0.127666666666667 -0.301666666666667 0.458230889462256 0.0377534618759035 0.798404255178242 -2.73365250193767 Q8N8A6 DDX51 Q8N8A6.S103.p_DDX51 Q8N8A6_S103s _1_1_103_103 Q8N8A6 Q8N8A6 ATP-dependent RNA helicase DDX51 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.9863.9863.3 33.11 29.62 2.691 7 1 1 0 1437.2506 4229.7824 S103s TMT10 94 (K) ADGEDAGAEsNEEAPGEPSAGSSEEAPGEPSAGSSEEAPGER (S) ADGEDAGAES(0.99)NEEAPGEPS(0.0)AGS(0.0)S(0.0)EEAPGEPS(0.0)AGS(0.0)S(0.0)EEAPGER s:Phosphorylated S DDX51 73026.6 9 2 1164.1 170.94 HUMAN 1 3.3892 -14.2304 GEDAGMSSEDDGLPR-p Q6NV74;S155-p GEDAGMSSEDDGLPR 0.76154028601362 0.312467152506031 0.06 0.112333333333333 2.26512883452503 6.67711023512578 0.06 0.112333333333333 0.593590738915077 0.214926010096953 0.566747851564487 1.40399593696978 Q6NV74 KIAA1211L Q6NV74.S155.p_KIAA1211L Q6NV74_S154sS155s_2_2_154_155 Q6NV74 Q6NV74 Uncharacterized protein KIAA1211-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7642.7642.3 7.92 7.92 99 2 2 2 0 699.6141 1920.8919 M153m S154s S155s TMT10 147 (K) RGEDAGmssEDDGLPR (S) RGEDAGM(1.0)S(1.0)S(1.0)EDDGLPR m:Oxidized methionine,s:Phosphorylated S KIAA1211L 102725.9 1 11 756.1 230.87 HUMAN 1 2.2651 6.6771 GEDALDFTQESEPSY-p H3BVG0;T159-p GEDALDFTQESEPSY 0.932840689729391 0.113420714206148 -0.0133333333333333 -0.201333333333333 0.596113564364399 12.4668115532736 -0.0133333333333333 -0.201333333333333 0.871743350946349 0.0566655155871993 -0.169255112460145 -2.41415817713369 H3BVG0 NotFound H3BVG0.T159.p_NotFound H3BVG0_T159t _1_1_159_159 H3BVG0 H3BVG0|Q8N1F7 Nuclear pore complex protein Nup93 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.34461.34461.3 19.39 19.39 1.224 7 1 1 0 1241.9397 3643.8329 T159t TMT10 144 (R) ILHTLLASGEDALDFtQESEPSYISDVGPPGR (S) ILHT(0.0)LLAS(0.0)GEDALDFT(0.99)QES(0.0)EPS(0.0)Y(0.0)IS(0.0)DVGPPGR t:Phosphorylated T NUP93 100351.7 1 7 862.1 210.52 HUMAN 1 -0.5961 -12.4668 GEDDLGGTVDIVESE-p P17010-3;T307-p GEDDLGGTVDIVESE 0.490692853704506 0.0268275454408896 0.116666666666667 0.509333333333333 5.69504900272285 21.3326934366603 0.116666666666667 0.509333333333334 0.269460492815955 0.00735750653191821 1.23004266163437 4.1667437371566 P17010 ZFX P17010.3.T307.p_ZFX P17010-3_T307t _1_1_307_307 P17010-3 P17010-3|P08048|P08048-3|P08048-2|P17010-2 Isoform 3 of Zinc finger X-chromosomal protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23766.23766.5 25.07 23.48 1.678 4 1 1 0 877.4193 4303.08 T307t TMT10 297 (K) ADPGEDDLGGtVDIVESEPENDHGVELLDQNSSIRVPR (E) ADPGEDDLGGT(0.99)VDIVES(0.0)EPENDHGVELLDQNS(0.0)S(0.0)IRVPR t:Phosphorylated T ZFX 96324.3 3 1 2932.1 65.64 HUMAN 1 5.695 21.3327 GEDEFVPSDGLDKDE-p Q02880;S1413-p GEDEFVPSDGLDKDE 0.711188084071652 0.925299121116981 -0.0763333333333333 0.0243333333333333 2.78336647187418 0.476385015930007 -0.0763333333333334 0.0243333333333333 0.526821332916259 0.896110360294364 -0.676057315302796 0.136819515955508 Q02880 TOP2B Q02880.S1413.p_TOP2B Q02880_S1413s _1_1_1413_1413 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24805.24805.4 25 19.88 5.747 6 1 1 0 975.2207 3817.8899 S1413s TMT10 1399 (K) ASPITNDGEDEFVPsDGLDKDEYTFSPGK (S) AS(0.0)PIT(0.0)NDGEDEFVPS(0.99)DGLDKDEY(0.0)T(0.0)FS(0.0)PGK K:TMT10,s:Phosphorylated S TOP2B 184233.7 7 34 71.1 658.36 HUMAN 1 -2.7834 0.4764 GEDEGPPSPGKTEPS-p Q5SXM8;S171-p GEDEGPPSPGKTEPS 0.906797957012739 0.537794449431099 0.0183333333333333 0.0666666666666667 0.833710293652864 3.62362426857279 0.0183333333333333 0.0666666666666667 0.825332544679579 0.434147768532376 0.231630004167125 0.844331328634929 Q5SXM8 DNLZ Q5SXM8.S171.p_DNLZ Q5SXM8_S171s _1_1_171_171 Q5SXM8 Q5SXM8 DNL-type zinc finger protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36238.36238.4 30.07 23.46 1.286 6 1 1 0 1075.2785 4218.1342 S171s TMT10 139 (R) VAGEGALELVLEAAGAPTSTAAPEAGEDEGPPsPGKTEPS (-) VAGEGALELVLEAAGAPT(0.0)S(0.0)T(0.0)AAPEAGEDEGPPS(0.99)PGKT(0.0)EPS(0.0) K:TMT10,s:Phosphorylated S DNLZ 19488.8 5 1 4544.1 30.07 HUMAN 1 0.8337 3.6236 GEDGLILTPLGRYQI-p Q9NXE4-4;T715-p GEDGLILTPLGRYQI 0.681920528763249 0.290612828783053 -0.059 0.108333333333333 3.11777818401297 7.08227719859712 -0.059 0.108333333333333 0.487777969607211 0.195781783359277 -0.744234516046108 1.47499553491826 Q9NXE4 SMPD4 Q9NXE4.4.T715.p_SMPD4 Q9NXE4-4_T715t _1_1_715_715 Q9NXE4-4 Q9NXE4-4|B1PBA3|H7BXF4|Q9NXE4-2|Q9NXE4-6|Q9NXE4-3|Q9NXE4-8|Q9NXE4-7|Q9NXE4-10|Q9NXE4-9|Q9NXE4-5 Isoform 4 of Sphingomyelin phosphodiesterase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30616.30616.2 13.39 13.39 99 1 1 1 0 1188.1178 2295.258 T715t TMT10 701 (K) QLPDCIVGEDGLILtPLGR (Y) QLPDCIVGEDGLILT(1.0)PLGR C:Carbamidomethylation,t:Phosphorylated T SMPD4 98945.3 2 5 1752.1 117.58 HUMAN 1 -3.1178 7.0823 GEDIDTISPTLGFNI-p P36404;S45-p GEDIDTISPTLGFNI 0.897527187617422 0.402790975224884 0.0243333333333333 0.091 0.920838500703356 5.25309165614489 0.0243333333333333 0.091 0.808939700557314 0.298325814061228 0.253902000076537 1.15000023927907 P36404 ARL2 P36404.S45.p_ARL2 P36404_S45s _1_1_45_45 P36404 P36404|P36404-2|V9GYD0 ADP-ribosylation factor-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27637.27637.3 20.98 19.04 2.34 3 1 1 0 959.5189 2796.5751 S45s TMT10 35 (K) KFNGEDIDTIsPTLGFNIK (T) KFNGEDIDT(0.0)IS(0.99)PT(0.0)LGFNIK K:TMT10,s:Phosphorylated S ARL2 21048.8 5 1 3660.1 45.81 HUMAN 1 0.9208 5.2531 GEDNEKST_______-p Q8NHU3;T365-p GEDNEKST_______ 0.724065572403675 0.0145497038675128 -0.0523333333333333 -0.433333333333333 2.65377750563989 25.4535914672071 -0.0523333333333334 -0.433333333333333 0.542778016263824 0.00284866154725621 -0.649168463012025 -5.15299830743802 Q8NHU3 SGMS2 Q8NHU3.T365.p_SGMS2 Q8NHU3_T365t _1_1_365_365 Q8NHU3 Q8NHU3 Phosphatidylcholine:ceramide cholinephosphotransferase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8688.8688.2 12.47 12.47 1.294 2 1 1 0 765.877 1450.779 T365t TMT10 357 (K) IGEDNEKSt (-) IGEDNEKS(0.0)T(0.99) K:TMT10,t:Phosphorylated T SGMS2 42849.9 1 1 6308.1 12.47 HUMAN 1 -2.6538 -25.4536 GEEAFQMSEVDEESG-p Q14966;S1882-p GEEAFQMSEVDEESG 0.570960585715825 0.102321225815913 -0.0763333333333333 0.189 4.48005676789762 13.0762432592702 -0.0763333333333333 0.189 0.356446474180031 0.049246534460903 -1.0078506589098 2.52342044640697 Q14966 ZNF638 Q14966.S1882.p_ZNF638 Q14966_S1882s _1_1_1882_1882 Q14966 Q14966|Q14966-3|Q14966-5 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19080.19080.5 21.57 19.32 6.783 4 1 1 0 904.465 4438.3105 S1882s TMT10 1867 (K) AVVTEPAKGEEAFQMsEVDEESGLKDSEPERK (R) AVVT(0.0)EPAKGEEAFQMS(0.99)EVDEES(0.0)GLKDS(0.0)EPERK K:TMT10,s:Phosphorylated S ZNF638 222047.2 3 24 165.1 494.68 HUMAN 1 -4.4801 13.0762 GEEARNLSFNELYPS-p Q8WYP5-2;S1576-p GEEARNLSFNELYPS 0.750432115138086 0.00450910773110636 -0.0476666666666667 -0.914 2.37459516842795 34.4086281208974 -0.0476666666666667 -0.914 0.578815940691594 0.000362357444286753 -0.590248749722096 -7.87902696378489 Q8WYP5 AHCTF1 Q8WYP5.2.S1576.p_AHCTF1 Q8WYP5-2_S1576s _1_1_1576_1576 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27970.27970.3 18.5 18.5 7.081 4 1 1 0 707.7061 2041.137 S1576s TMT10 1574 (R) NLsFNELYPSGTLK (L) NLS(0.99)FNELY(0.0)PS(0.0)GT(0.0)LK K:TMT10,s:Phosphorylated S AHCTF1 258049.6 5 26 40.1 829.79 HUMAN 1 -2.3746 -34.4086 GEEEEKESSGEIEAA-p Q6AI08;S336-p GEEEEKESSGEIEAA 0.653879059629147 0.43910939708751 -0.0796666666666667 -0.085 3.45891355591409 4.7617033571725 -0.0796666666666667 -0.085 0.450929496306335 0.334063990260901 -0.812176295874111 -1.05999672625558 Q6AI08 HEATR6 Q6AI08.S336.p_HEATR6 Q6AI08_S336s _1_1_336_336 Q6AI08 Q6AI08|K7EIX2|A0A087WXZ7|K7ELR8 HEAT repeat-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11281.11281.4 22.37 17.48 1.147 4 1 1 0 882.453 3446.8218 S336s TMT10 325 (K) KIQQGEEEEKEsSGEIEAAPVTGTGR (V) KIQQGEEEEKES(0.99)S(0.0)GEIEAAPVT(0.0)GT(0.0)GR K:TMT10,s:Phosphorylated S HEATR6 130490.6 2 1 2005.1 102.98 HUMAN 1 -3.4589 -4.7617 GEEKDINTFVGTPVE-p P46013;T1919-p GEEKDINTFVGTPVE 0.182356635635771 0.00387979257248964 0.494 -1.14866666666667 14.5400175494347 35.6187913849068 0.494 -1.14866666666667 0.035155901990824 0.000274233724149676 2.7926179919192 -8.32482489197548 P46013 MKI67 P46013.T1919.p_MKI67 P46013_T1919t_1_1_1919_1919 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33718.33718.3 8.04 8.04 1.133 3 1 1 0 1065.9282 3114.8018 N1918n T1919t TMT10 1916 (K) DIntFVGTPVEKLDLLGNLPGSK (R) DIN(0.99)T(0.99)FVGT(0.0)PVEKLDLLGN(0.0)LPGS(0.0)K K:TMT10,n:Deamidated,t:Phosphorylated T MKI67 360912.4 1 62 5.1 1918.46 HUMAN 1 14.54 -35.6188 GEEKKAWTPSRLERI-p O60299;T661-p GEEKKAWTPSRLERI 0.0684521497222417 0.269665305927878 -0.449333333333333 0.171333333333333 25.0934859428384 7.49455895966323 -0.449333333333333 0.171333333333333 0.00309493409738735 0.178050871619165 -5.06749292561186 1.54687707377339 O60299 LZTS3 O60299.T661.p_LZTS3 O60299_T661t _1_1_661_661 O60299 O60299|O60299-2 Leucine zipper putative tumor suppressor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12416.12416.3 9.04 9.04 7.691 2 1 1 0 475.58 1344.7586 T661t TMT10 659 (K) AWtPSRLER (I) AWT(0.99)PS(0.0)RLER t:Phosphorylated T LZTS3 72303 1 2 5232.1 21.51 HUMAN 1 -25.0935 7.4946 GEEPGQLSPGVQFQR-p Q07002-2;S74-p GEEPGQLSPGVQFQR 0.702336120928891 0.898912157702689 0.0713333333333333 0.0126666666666667 2.88608881296687 0.648376665637174 0.0713333333333334 0.0126666666666667 0.514506799640193 0.861315640224176 0.697179138696188 0.183174968952488 Q07002 CDK18 Q07002.2.S74.p_CDK18 Q07002-2_S74s _1_1_74_74 Q07002-2 Q07002-3|Q07002-2 Isoform 2 of Cyclin-dependent kinase 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20378.20378.4 29.85 25.08 8.849 6 1 1 0 1209.322 4754.3066 S74s TMT10 41 (R) RNENLQLGPLGRDPPQECSTFSPTDSGEEPGQLsPGVQFQR (R) RNENLQLGPLGRDPPQECS(0.0)T(0.0)FS(0.0)PT(0.0)DS(0.0)GEEPGQLS(0.99)PGVQFQR C:Carbamidomethylation,s:Phosphorylated S CDK18 54765.8 6 3 1225.1 164.54 HUMAN 1 2.8861 0.6484 GEEPSEYTDEEDTKD-p O15173-2;T235-p GEEPSEYTDEEDTKD 0.0447859715508879 0.392464986578015 -0.710333333333333 0.120666666666667 29.9013798122026 5.40091657558874 -0.710333333333333 0.120666666666667 0.00102296792992282 0.288342289443934 -6.40217418515473 1.17679284335936 O15173 PGRMC2 O15173.2.T235.p_PGRMC2 O15173-2_T235t _1_1_235_235 O15173-2 O15173-2|U3KQM0|D3DNX8 Isoform 2 of Membrane-associated progesterone receptor component 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13368.13808.5 27.73 27.73 4.104 4 1 1 0 763.5835 3733.9214 T235t TMT10 224 (R) LLKPGEEPSEYtDEEDTKDHNKQD (-) LLKPGEEPS(0.0)EY(0.0)T(0.99)DEEDT(0.0)KDHNKQD K:TMT10,t:Phosphorylated T PGRMC2 26226.7 24 3 2278.1 89.96 HUMAN 1 -29.9014 5.4009 GEEPTVYSDEEEPKD-p O00264;S181-p GEEPTVYSDEEEPKD 0.0721955710812666 0.482517197022028 -0.9 -0.134 24.5951279830182 4.22441778500586 -0.9 -0.134 0.00347126046217383 0.378057816319186 -4.94196060485209 -0.959622171254604 O00264 PGRMC1 O00264.S181.p_PGRMC1 O00264_S181s _1_1_181_181 O00264 O00264|O00264-2 Membrane-associated progesterone receptor component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15281.15281.3 22.7 18.15 2.933 4 1 1 0 1139.9016 3337.7254 S181s TMT10 170 (K) LLKEGEEPTVYsDEEEPKDESAR (K) LLKEGEEPT(0.0)VY(0.0)S(0.99)DEEEPKDES(0.0)AR K:TMT10,s:Phosphorylated S PGRMC1 21784.9 31 2 873.1 209.48 HUMAN 1 -24.5951 -4.2244 GEERGLWSTDSAEED-p Q99549-2;S400-p GEERGLWSTDSAEED 0.201694340984261 0.131408264623926 0.205666666666667 -0.164 13.5056599731744 11.6191484553516 0.205666666666667 -0.164 0.0446101827815604 0.0688787337358339 2.60259588313737 -2.2638708884134 Q99549 MPHOSPH8 Q99549.2.S400.p_MPHOSPH8 Q99549-2_S400s _1_1_400_400 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16500.16500.3 14.45 14.45 1.112 4 1 1 0 821.7471 2383.2596 S400s TMT10 397 (R) GLWsTDSAEEDKETK (R) GLWS(0.99)T(0.0)DS(0.0)AEEDKET(0.0)K K:TMT10,s:Phosphorylated S MPHOSPH8 98148.4 5 16 242.1 413.34 HUMAN 1 13.5057 -11.6191 GEESRLESGMQNMSI-p P05787;S404-p GEESRLESGMQNMSI 0.983318743723193 0.230341680762996 -0.00433333333333335 0.118666666666667 0.144481254843379 8.39817851421125 -0.00433333333333336 0.118666666666667 0.96727925689149 0.144604613355104 -0.0429532383371341 1.70360487638438 P05787 KRT8 P05787.S404.p_KRT8 P05787_S404s _1_1_404_404 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16261.16261.3 18.29 11.03 4.57 3 1 1 0 672.0015 1934.024 S404s TMT10 402 (R) LEsGMQNMSIHTK (T) LES(0.99)GMQNMS(0.0)IHT(0.0)K K:TMT10,s:Phosphorylated S KRT8 53703.3 5 28 69.1 672.47 HUMAN 1 -0.1445 8.3982 GEEVGESSEEQDNAP-p A0A1B0GTW1;S1127-p GEEVGESSEEQDNAP 0.7017758162987 0.290567454409063 0.0603333333333333 -0.109 2.89054174352227 7.08322362038008 0.0603333333333333 -0.109 0.513979533233747 0.195739122914791 0.698091034215949 -1.47516092637008 A0A1B0GTW1 NotFound A0A1B0GTW1.S1127.p_NotFound A0A1B0GTW1_S1126sS1127s_2_2_1126_1127 A0A1B0GTW1 Q9UDY2|Q9UDY2-3|Q9UDY2-6|A0A1B0GTW1|Q9UDY2-7 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21081.21713.4 20.68 20.68 20.231 5 2 2 0 985.733 3779.9794 S1126s S1127s TMT10 1107 (R) SILKPSTPIPPQEGEEVGEssEEQDNAPK (S) S(0.0)ILKPS(0.0)T(0.0)PIPPQEGEEVGES(0.99)S(0.99)EEQDNAPK K:TMT10,s:Phosphorylated S TJP2 141123.7 6 36 41.1 827.72 HUMAN 1 2.8905 -7.0832 GEFEEGASENNAKES-p O43719;S445-p GEFEEGASENNAKES 0.129751256844141 0.00504553803227928 -0.503666666666667 0.618666666666667 18.3553849157647 33.4763463395919 -0.503666666666667 0.618666666666667 0.01460365311338 0.000449123072173515 -3.53454877881141 7.54978910649325 O43719 HTATSF1 O43719.S445.p_HTATSF1 O43719_S445s_1_1_445_445 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11032.11032.3 14.05 14.05 1.39 2 1 1 0 775.0062 2242.0512 S445s N447n TMT10 434 (K) TEDGGEFEEGAsEnNAK (E) T(0.0)EDGGEFEEGAS(0.99)EN(0.99)N(0.0)AK K:TMT10,s:Phosphorylated S,n:Deamidated HTATSF1 86421.8 3 4 149.1 512 HUMAN 1 -18.3554 33.4763 GEFKQTSSFLV____-p Q9Y624;S296-p GEFKQTSSFLV____ 0.840696231762748 0.0609165366349795 0.0373333333333333 -0.277666666666667 1.45583749580604 16.1891737322825 0.0373333333333333 -0.277666666666667 0.71518146479969 0.0240482028598533 0.384611283834178 -3.10237406295775 Q9Y624 F11R Q9Y624.S296.p_F11R Q9Y624_S296s _1_1_296_296 Q9Y624 Q9Y624|A0A087WY82|Q9Y624-2 Junctional adhesion molecule A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23042.23042.3 12.4 12.4 1.394 4 1 1 0 666.3392 1917.037 S296s TMT10 287 (R) SEGEFKQTSsFLV (-) S(0.0)EGEFKQT(0.0)S(0.0)S(0.99)FLV K:TMT10,s:Phosphorylated S F11R 32981.9 2 3 2495.1 81.23 HUMAN 1 1.4558 -16.1892 GEFPCQHSPEAWRVD-p Q9NYW8;S78-p GEFPCQHSPEAWRVD 0.337410296300458 0.132606311322782 0.140666666666667 0.187333333333333 8.78719013662986 11.5645878900699 0.140666666666667 0.187333333333333 0.132215078239906 0.0697495180327374 1.77152521845267 2.25425693371829 Q9NYW8 RBAK Q9NYW8.S78.p_RBAK Q9NYW8_S78s_1_1_78_78 Q9NYW8 Q9NYW8|I3L0D1 RB-associated KRAB zinc finger protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24670.24670.5 12.81 12.81 99 1 1 1 0 807.9741 3939.8632 M69m S78s TMT10 60 (K) LEQGEEPWImGGEFPCQHsPEAWRVDDLIER (I) LEQGEEPWIM(1.0)GGEFPCQHS(1.0)PEAWRVDDLIER C:Carbamidomethylation,m:Oxidized methionine,s:Phosphorylated S RBAK 85446.6 2 1 6255.1 12.81 HUMAN 1 8.7872 11.5646 GEFYKSLTNDWEDHL-p P07900;T317-p GEFYKSLTNDWEDHL 0.146674740935683 0.140994003410884 -0.533 0.196666666666667 16.9597504089158 11.2097901250808 -0.533 0.196666666666667 0.0201383998286904 0.0756869470222231 -3.25471149599717 2.19189428750066 P07900 HSP90AA1 P07900.T317.p_HSP90AA1 P07900_T317t _1_1_317_317 P07900 P07900-2|P08238 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21257.21463.2 13.68 8.7 1.131 2 1 1 0 1033.5223 1986.0697 T317t TMT10 315 (K) SLtNDWEDHLAVK (H) S(0.0)LT(0.99)NDWEDHLAVK K:TMT10,t:Phosphorylated T HSP90AA1 85057.6 4 9 43.1 810.87 HUMAN 1 -16.9598 11.2098 GEGARSPSPAAVSLG-p Q7RTP0;S24-p GEGARSPSPAAVSLG 0.617172810629532 0.858740289582643 0.0766666666666667 0.0253333333333333 3.89149921549011 0.931499206232033 0.0766666666666667 0.0253333333333333 0.40817845589821 0.806956416778729 0.896331959730234 0.256581301839027 Q7RTP0 NIPA1 Q7RTP0.S24.p_NIPA1 Q7RTP0_S24s_1_1_24_24 Q7RTP0 Q7RTP0 Magnesium transporter NIPA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.38680.38680.3 14.14 14.14 1.188 7 1 1 0 1108.6233 3242.8764 S24s N42n TMT10 22 (R) SPsPAAVSLGLGVAVVSSLVnGSTFVLQK (K) S(0.0)PS(0.99)PAAVS(0.0)LGLGVAVVS(0.0)S(0.0)LVN(1.0)GS(0.0)T(0.0)FVLQK K:TMT10,s:Phosphorylated S,n:Deamidated NIPA1 35074.8 6 1 3732.1 44.33 HUMAN 1 3.8915 0.9315 GEGKELLSPGAPLTK-p Q8IXS8;S508-p GEGKELLSPGAPLTK 0.275717902604065 0.00360242696478209 -0.182 -0.655333333333333 10.5859380880827 36.3799227369594 -0.182 -0.655333333333333 0.0873788231532131 0.000230148276151021 -2.08371769879979 -8.6163590674527 Q8IXS8 FAM126B Q8IXS8.S508.p_FAM126B Q8IXS8_S508s _1_1_508_508 Q8IXS8 Q8IXS8 Protein FAM126B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22838.22838.3 9.62 9.62 9.623 2 1 1 0 555.3195 1583.9773 S508s TMT10 505 (K) ELLsPGAPLTK (Q) ELLS(0.99)PGAPLT(0.0)K K:TMT10,s:Phosphorylated S FAM126B 59101.9 1 11 955.1 195.77 HUMAN 1 -10.5859 -36.3799 GEIEDDESGTENREE-p Q9Y2W1;S939-p GEIEDDESGTENREE 0.599319695967095 0.0149985430633291 -0.112666666666667 0.366333333333333 4.10759081195326 25.2409907268475 -0.112666666666667 0.366333333333333 0.388365746725016 0.00299158210921681 -0.937640604729714 5.09862856661751 Q9Y2W1 THRAP3 Q9Y2W1.S939.p_THRAP3 Q9Y2W1_S939s _1_1_939_939 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13249.13249.5 23.37 19.3 1.239 3 1 1 0 758.9527 3710.7661 S939s TMT10 922 (K) WAHDKFSGEEGEIEDDEsGTENREEK (D) WAHDKFS(0.0)GEEGEIEDDES(0.99)GT(0.0)ENREEK K:TMT10,s:Phosphorylated S THRAP3 108720.9 12 87 10.2 1293.04 HUMAN 1 -4.1076 25.241 GEIKKAGSDGDIMDS-p Q6F5E8;S1246-p GEIKKAGSDGDIMDS 0.442255018378989 0.797263571699455 -0.156 0.0256666666666667 6.52978314272128 1.37501440729205 -0.156 0.0256666666666667 0.222342091047559 0.728615757398145 -1.37842621956292 0.365432409087839 Q6F5E8 RLTPR Q6F5E8.S1246.p_RLTPR Q6F5E8_S1246s _1_1_1246_1246 Q6F5E8 Q6F5E8|Q6F5E8-2 Capping protein, Arp2/3 and myosin-I linker protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23473.23473.3 18.63 18.63 4.778 5 1 1 0 843.7456 2449.2532 S1246s TMT10 1244 (K) AGsDGDIMDSSTEAPPISIK (S) AGS(0.99)DGDIMDS(0.0)S(0.0)T(0.0)EAPPIS(0.0)IK K:TMT10,s:Phosphorylated S CARMIL2 156226.7 5 2 2015.1 102.3 HUMAN 1 -6.5298 1.375 GEILPKPTKGRMRIH-p O15020;T107-p GEILPKPTKGRMRIH 0.248027394538693 0.0183223906633918 0.200666666666667 -0.851 11.5666491081748 23.9120256716291 0.200666666666667 -0.851 0.0697164218587247 0.00406253796768436 2.25569750746169 -4.76778351797917 O15020 SPTBN2 O15020.T107.p_SPTBN2 O15020_T107t _1_1_107_107 O15020 O15020|O15020-2|A4QPE4 Spectrin beta chain, non-erythrocytic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30480.30480.4 12.06 12.06 1.243 2 1 1 0 655.1462 2537.5998 T107t TMT10 94 (R) LLEVLSGEILPKPtKGR (M) LLEVLS(0.0)GEILPKPT(0.99)KGR K:TMT10,t:Phosphorylated T SPTBN2 272689.3 1 1 781.1 225.92 HUMAN 1 11.5666 -23.912 GEINIDSSGETVGSG-p P42695;S531-p GEINIDSSGETVGSG 0.375226204548174 0.0403911539482336 -0.140666666666667 0.366333333333333 7.87760329580847 18.6876146885395 -0.140666666666667 0.366333333333333 0.163019542659588 0.0135281537715004 -1.61392065457504 3.59969701290692 P42695 NCAPD3 P42695.S531.p_NCAPD3 P42695_S530sS531s_2_2_530_531 P42695 P42695|G3V1A9|E9PKK4 Condensin-2 complex subunit D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.11053.11438.2 13.84 13.84 2.552 6 2 2 0 1133.9385 2106.9422 S530s S531s Hydrogen 520 (R) SEPSGEINIDssGETVGSGER (C) S(0.0)EPS(0.0)GEINIDS(0.99)S(0.99)GET(0.0)VGS(0.0)GER s:Phosphorylated S NCAPD3 171055.8 3 10 1254.1 161.61 HUMAN 1 -7.8776 18.6876 GEIQKENSREALAEA-p O14745;S269-p GEIQKENSREALAEA 0.353684375195394 0.222428152242474 0.22 0.221 8.38649637856273 8.59689804342265 0.22 0.221 0.144994110536993 0.138137055887238 1.702150086647 1.7379888701463 O14745 SLC9A3R1 O14745.S269.p_SLC9A3R1 O14745_S269s_1_1_269_269 O14745 O14745|O14745-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24323.24323.5 20.99 14.05 1.117 4 1 1 0 1017.7349 5003.6904 N261n S269s Hydrogen 244 (R) VIPSQEHLNGPLPVPFTnGEIQKENsREALAEAALESPRPALVR (S) VIPS(0.0)QEHLN(0.0)GPLPVPFT(0.0)N(0.99)GEIQKEN(0.0)S(0.99)REALAEAALES(0.0)PRPALVR K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S SLC9A3R1 39153 7 10 534.1 279.04 HUMAN 1 8.3865 8.5969 GEKDWQKYETARRLK-p P11387;Y444-p GEKDWQKYETARRLK 0.132882806400642 0.0212584509033943 0.301333333333333 -0.471666666666667 18.0840230447842 22.8746104155616 0.301333333333333 -0.471666666666667 0.01554524945329 0.00515868439043207 3.47928991055059 -4.51982133128923 P11387 TOP1 P11387.Y444.p_TOP1 P11387_Y444y _1_1_444_444 P11387 P11387 DNA topoisomerase 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.9340.9340.3 10.3 1.11 1.771 2 1 1 0 630.9926 1810.9964 Y444y TMT10 440 (K) DWQKyETARR (L) DWQKY(0.99)ET(0.0)ARR K:TMT10,y:Phosphorylated Y TOP1 91180.5 3 1 173.1 19.93 HUMAN 1 18.084 -22.8746 GEKEKKKSNLELFKE-p O15042;S202-p GEKEKKKSNLELFKE 0.0990100894964126 0.825657726325012 -0.397666666666667 -0.0236666666666667 21.2575553494023 1.16403475842877 -0.397666666666667 -0.0236666666666667 0.00748590764875923 0.764885669278257 -4.15418464724621 -0.314501665079508 O15042 U2SURP O15042.S202.p_U2SURP O15042_S202s _1_1_202_202 O15042 O15042|O15042-2|E7ET15|E7EW00 U2 snRNP-associated SURP motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19746.19746.5 9.31 4.17 99 1 1 1 0 567.1479 2751.7357 S202s TMT10 200 (K) KKsNLELFKEELK (Q) KKS(1.0)NLELFKEELK K:TMT10,s:Phosphorylated S U2SURP 118746.2 1 6 360.1 345.29 HUMAN 1 -21.2576 -1.164 GEKEPVVSPKENIHN-p Q5THK1;S437-p GEKEPVVSPKENIHN 0.192683505288984 0.44435419329539 -0.759333333333333 -0.0803333333333333 13.9567443958922 4.69015481847157 -0.759333333333333 -0.0803333333333334 0.0402092118435526 0.339613165752626 -2.68498011467504 -1.04675805762948 Q5THK1 PRR14L Q5THK1.S437.p_PRR14L Q5THK1_S437s _1_1_437_437 Q5THK1 Q5THK1|Q5THK1-4|Q5THK1-2 Protein PRR14L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9755.9755.3 15.56 8.48 9.264 2 1 1 0 695.3726 2004.1403 S437s TMT10 428 (R) CSGEKEPVVsPK (E) CS(0.0)GEKEPVVS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRR14L 241289.3 1 2 1413.1 145.23 HUMAN 1 -13.9567 -4.6902 GEKGHYAYDCHRYSR-p Q16629;Y117-p GEKGHYAYDCHRYSR 0.026747851046075 0.00467082302523188 -0.881666666666667 -1.06433333333333 36.5704264193493 34.0877517901613 -0.881666666666667 -1.06433333333333 0.000220271017562805 0.000390143899986448 -8.70860720774838 -7.76434724792786 Q16629 SRSF7 Q16629.Y117.p_SRSF7 Q16629_Y117y _1_1_117_117 Q16629 Q16629|C9JAB2|Q16629-4|A0A0B4J1Z1|Q16629-2|Q16629-3|F8WEA1 Serine/arginine-rich splicing factor 7 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.4152.4152.3 24.81 24.81 8.16 2 1 1 0 496.5407 1407.6425 Y117y TMT10 113 (K) GHYAyDCHR (Y) GHY(0.0)AY(0.99)DCHR C:Carbamidomethylation,y:Phosphorylated Y SRSF7 27594.3 2 2 55.1 40.75 HUMAN 1 -36.5704 -34.0878 GEKHHSDSDEEKSHR-p Q9UPT8;S94-p GEKHHSDSDEEKSHR 0.0544601171191331 0.0373007130659387 2.97866666666667 -1.33733333333333 27.5150459128785 19.1954877928784 2.97866666666667 -1.33733333333333 0.00177212931038457 0.0120351420533615 5.71028146308292 -3.70509061851389 Q9UPT8 ZC3H4 Q9UPT8.S94.p_ZC3H4 Q9UPT8_S92sS94s_2_2_92_94 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3187.3187.5 8.94 8.94 8.937 3 2 2 0 448.4029 2078.0528 S92s S94s TMT10 90 (K) HHsDsDEEKSHRR (L) HHS(0.99)DS(0.99)DEEKS(0.0)HRR K:TMT10,s:Phosphorylated S ZC3H4 140881.7 2 13 427.1 318.7 HUMAN 1 27.515 -19.1955 GEKNSSQSEEDDIER-p Q12983;S160-p GEKNSSQSEEDDIER 0.933746395674177 0.00295286178234935 0.0123333333333333 0.994 0.586294570110667 38.13930140071 0.0123333333333333 0.994 0.873716511298486 0.0001534863858735 0.166622333978832 9.32513614506181 Q12983 BNIP3 Q12983.S160.p_BNIP3 Q12983_S160s _1_1_160_160 Q12983 Q12983 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5261.5261.2 9.82 5.2 2.225 3 1 1 0 859.3589 1637.7452 S160s TMT10 156 (K) NSSQsEEDDIER (R) NS(0.0)S(0.0)QS(0.99)EEDDIER s:Phosphorylated S BNIP3 28002.8 1 2 4505.1 30.61 HUMAN 1 0.5863 38.1393 GEKRKRETDDEGEDD-p Q92688;T244-p GEKRKRETDDEGEDD 0.0241132206334896 0.0185337296351753 0.711 0.495 37.4823087164653 23.8361903839126 0.711 0.495 0.000178553812756419 0.00413409984783111 9.07385435021795 4.74935954634982 Q92688 ANP32B Q92688.T244.p_ANP32B Q92688_T244t _1_1_244_244 Q92688 Q92688 Acidic leucine-rich nuclear phosphoprotein 32 family member B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3520.3520.4 12.59 12.59 99 1 1 1 0 501.4831 1922.9456 T244t TMT10 240 (K) RKREtDDEGEDD (-) RKRET(1.0)DDEGEDD K:TMT10,t:Phosphorylated T ANP32B 28958.4 6 6 3539.2 48.78 HUMAN 1 37.4823 23.8362 GEKSFRRSVVGTPAY-p B4DTS2;S710-p GEKSFRRSVVGTPAY 0.226823717040469 0.532789580969397 -0.298333333333333 0.137666666666667 12.379953591862 3.67723504321294 -0.298333333333333 0.137666666666667 0.0578102224897166 0.428821444752097 -2.39991479676124 0.854770672263906 B4DTS2 NotFound B4DTS2.S710.p_NotFound B4DTS2_S710s _1_1_710_710 B4DTS2 B4DTS2|Q9BZL6|Q9BZL6-2 Serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.32227.32227.3 23.76 23.76 2.94 4 1 1 0 857.4461 2490.3554 S710s TMT10 710 (R) sVVGTPAYLAPEVLLNQGYNR (S) S(0.99)VVGT(0.0)PAY(0.0)LAPEVLLNQGY(0.0)NR s:Phosphorylated S PRKD2 99053.8 2 7 1565.2 131.21 HUMAN 1 -12.38 3.6772 GEKTEDESLVENNDN-p P49321-3;S129-p GEKTEDESLVENNDN 0.304068314845154 0.98845875188138 0.289666666666667 0.00366666666666669 9.68706491418549 0.0770645237369028 0.289666666666667 0.00366666666666664 0.10747154903024 0.982411748821471 1.9273905056817 0.0230803979169759 P49321 NASP P49321.3.S129.p_NASP P49321-3_T125tS129s_2_2_125_129 P49321-3 P49321-3|P49321-4 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24993.24993.5 23.09 23.09 99 2 2 2 0 1012.8531 4900.2955 T125t S129s TMT10 103 (R) MENGVLGNALEGVHVEEEEGEKtEDEsLVENNDNIDEEAR (E) MENGVLGNALEGVHVEEEEGEKT(1.0)EDES(1.0)LVENNDNIDEEAR K:TMT10,t:Phosphorylated T,s:Phosphorylated S NASP 86552 4 29 87.1 626.46 HUMAN 1 9.6871 0.0771 GEKVKAESEPREAKK-p Q03111;S345-p GEKVKAESEPREAKK 0.451712086772319 0.956100710148739 0.135333333333333 0.00600000000000002 6.37406463678813 0.279277548348195 0.135333333333333 0.00600000000000003 0.230458927430451 0.937717983939212 1.35093733686114 0.0818297422275341 Q03111 MLLT1 Q03111.S345.p_MLLT1 Q03111_S345s _1_1_345_345 Q03111 Q03111 Protein ENL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6051.6051.3 11.63 6.31 99 1 1 1 0 671.0452 1931.1529 S345s TMT10 341 (K) VKAEsEPREAK (K) VKAES(1.0)EPREAK K:TMT10,s:Phosphorylated S MLLT1 62454.4 2 5 685.1 243.68 HUMAN 1 6.3741 0.2793 GEKYGYLSLPKPMKN-p Q9UBT7;S538-p GEKYGYLSLPKPMKN 0.114050912851162 0.0069149498649713 -0.365 -0.56 19.6494877245885 30.9737078194682 -0.365 -0.56 0.0108405477699873 0.000799151682343223 -3.80412718992655 -6.7228203561428 Q9UBT7 CTNNAL1 Q9UBT7.S538.p_CTNNAL1 Q9UBT7_S538s _1_1_538_538 Q9UBT7 Q9UBT7|Q9UBT7-2|Q9UBT7-3 Alpha-catulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23418.23418.2 11.99 7.68 11.985 3 1 1 0 739.908 1398.8397 S538s TMT10 534 (K) YGYLsLPK (P) Y(0.0)GY(0.0)LS(0.99)LPK K:TMT10,s:Phosphorylated S CTNNAL1 82636.6 10 3 2440.1 83.32 HUMAN 1 -19.6495 -30.9737 GELCDAISAVEEKVS-p A0A1B0GUA3;S400-p GELCDAISAVEEKVS 0.953405971129685 0.312255565595089 0.00899999999999999 0.103 0.408445995613739 6.68136606641758 0.00899999999999999 0.103 0.910238918544925 0.214715498369789 0.118112753889903 1.40474390823933 A0A1B0GUA3 NotFound A0A1B0GUA3.S400.p_NotFound A0A1B0GUA3_S400s _1_1_400_400 A0A1B0GUA3 A0A1B0GUA3|Q96EK5 KIF1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29264.29264.3 20.96 20.96 8.045 2 1 1 0 854.7576 2482.29 S400s TMT10 387 (K) AVQFGTGELCDAIsAVEEK (V) AVQFGT(0.0)GELCDAIS(0.99)AVEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIF1BP 75466.9 1 3 2127.1 96.61 HUMAN 1 0.4084 6.6814 GELKRRYTIIPLNKI-p O95347;T574-p GELKRRYTIIPLNKI 0.336940767668124 0.0117297467150433 -0.179666666666667 -0.437 8.80522039605078 26.990779321993 -0.179666666666667 -0.437 0.1316673092413 0.00199950303557541 -1.77464623250525 -5.5586332922239 O95347 SMC2 O95347.T574.p_SMC2 O95347_T574t _1_1_574_574 O95347 O95347|O95347-2 Structural maintenance of chromosomes protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20805.20805.2 8.2 8.2 3.113 2 1 1 0 635.8546 1190.7346 T574t Hydrogen 573 (R) YtIIPLNK (I) Y(0.0)T(0.99)IIPLNK K:TMT10-Lys-Only,t:Phosphorylated T SMC2 136167.1 2 2 2559.1 78.57 HUMAN 1 -8.8052 -26.9908 GELRKEPSL______-p P09758;S322-p GELRKEPSL______ 0.867635849079879 0.948512432457043 -0.0283333333333333 0.0183333333333334 1.20154591258167 0.328651219320902 -0.0283333333333333 0.0183333333333334 0.758307600167627 0.927117711977967 -0.323697064657419 0.0958038309779177 P09758 TACSTD2 P09758.S322.p_TACSTD2 P09758_S322s _1_1_322_322 P09758 P09758 Tumor-associated calcium signal transducer 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16964.17169.2 8.58 8.58 99 1 1 1 0 904.9988 1729.026 S322s TMT10 313 (K) ELGELRKEPsL (-) ELGELRKEPS(1.0)L K:TMT10,s:Phosphorylated S TACSTD2 36393.4 2 1 6941.1 8.58 HUMAN 1 -1.2015 0.3287 GELRRTKSKGSLEIT-p Q9C0B5;S296-p GELRRTKSKGSLEIT 0.915262614364166 0.691045226554522 -0.0186666666666667 0.0423333333333334 0.753108942326892 2.20065929257209 -0.0186666666666667 0.0423333333333334 0.840793035698547 0.602468119817332 -0.210747769011457 0.552728168590052 Q9C0B5 ZDHHC5 Q9C0B5.S296.p_ZDHHC5 Q9C0B5_S296sS299s_2_2_296_299 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18176.18176.5 21.71 18.24 2.37 6 2 2 0 736.9753 3520.9102 S296s S299s TMT10 296 (K) sKGsLEITESQSADAEPPPPPKPDLSR (Y) S(0.99)KGS(0.99)LEIT(0.0)ES(0.0)QS(0.0)ADAEPPPPPKPDLS(0.0)R K:TMT10,s:Phosphorylated S ZDHHC5 78285 8 26 134.1 530.74 HUMAN 1 -0.7531 2.2007 GELSRSPSPFTHTHL-p P38398;S1191-p GELSRSPSPFTHTHL 0.925465902873866 0.251651509874661 -0.0153333333333333 -0.133333333333333 0.663973665567339 7.89128396835286 -0.0153333333333333 -0.133333333333333 0.85822790909816 0.16250682420097 -0.187327092500115 -1.61579064162634 P38398 BRCA1 P38398.S1191.p_BRCA1 P38398_S1191s _1_1_1191_1191 P38398 P38398-7 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8658.8658.4 10.37 10.37 1.296 5 1 1 0 541.7717 2084.0987 S1191s TMT10 1189 (R) SPsPFTHTHLAQGYRR (G) S(0.0)PS(0.99)PFT(0.0)HT(0.0)HLAQGY(0.0)RR s:Phosphorylated S BRCA1 210227.6 3 12 106.1 588.91 HUMAN 1 -0.664 -7.8913 GELTPANSQSRMSTN-p A8K070;S518-p GELTPANSQSRMSTN 0.834457269906401 0.907521471956381 0.0453333333333333 -0.018 1.51590364561905 0.590036792382952 0.0453333333333333 -0.018 0.705358063452007 0.872963972816171 0.398710544922715 -0.167610535939517 A8K070 NotFound A8K070.S518.p_NotFound A8K070_S518s _1_1_518_518 A8K070 Q13098-7|A8K070|A0A096LPJ3 COP9 signalosome complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5891.5891.3 12.01 12.01 1.12 5 1 1 0 769.7035 2227.1265 S518s TMT10 503 (K) SPPREGSQGELTPANsQSR (M) S(0.0)PPREGS(0.0)QGELT(0.0)PANS(0.99)QS(0.0)R s:Phosphorylated S GPS1 59605.7 1 7 2547.1 79 HUMAN 1 1.5159 -0.59 GEMERRDSDSFLNIF-p A0A286YES6;S802-p GEMERRDSDSFLNIF 0.195954837597201 0.801366684110004 0.236333333333333 0.0316666666666667 13.8019470052505 1.34481733410636 0.236333333333333 0.0316666666666667 0.0416682536756215 0.733699573449585 2.65662713088095 0.358230656857283 A0A286YES6 NotFound A0A286YES6.S802.p_NotFound A0A286YES6_S802s _1_1_802_802 A0A286YES6 A0A286YES6|O94854|O94854-2 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26839.26839.5 17.7 12.51 1.166 6 1 1 0 1061.5238 5223.6359 S802s TMT10 772 (R) LNPDGVETVNDTKPELNVASSEGGEMERRDsDSFLNIFPEK (Q) LNPDGVET(0.0)VNDT(0.0)KPELNVAS(0.0)S(0.0)EGGEMERRDS(0.99)DS(0.0)FLNIFPEK K:TMT10,s:Phosphorylated S MACF1 151593.8 1 5 2797.1 70.2 HUMAN 1 13.8019 1.3448 GEMGLDYSYKCTTPV-p Q93075;S599-p GEMGLDYSYKCTTPV 0.0499167591004882 0.230060822183448 -0.94 -0.122333333333333 28.7636356078892 8.40668679593765 -0.94 -0.122333333333333 0.00132934112118477 0.144321595161645 -6.0646003093785 -1.7050773756304 Q93075 TATDN2 Q93075.S599.p_TATDN2 Q93075_S599s _1_1_599_599 Q93075 Q93075 Putative deoxyribonuclease TATDN2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27584.27584.3 19.64 19.64 2.298 3 1 1 0 697.0095 2009.0454 S599s TMT10 588 (K) AVAFGEMGLDYsYK (C) AVAFGEMGLDY(0.0)S(0.99)Y(0.0)K K:TMT10,s:Phosphorylated S TATDN2 86048.5 1 7 1656.1 123.28 HUMAN 1 -28.7636 -8.4067 GENAPVLSDDELVSM-p O60675;S25-p GENAPVLSDDELVSM 0.757142400399754 0.0713780522378276 -0.0673333333333333 0.246 2.31422805019679 15.2409840868162 -0.0673333333333333 0.246 0.586917683798561 0.0299158668312107 -0.577317964163363 2.92182702053928 O60675 MAFK O60675.S25.p_MAFK O60675_S25s _1_1_25_25 O60675 O60675 Transcription factor MafK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24568.24568.3 18 18 6.549 3 1 1 0 809.7171 2347.1649 S25s TMT10 16 (K) EAGENAPVLsDDELVSMSVR (E) EAGENAPVLS(0.99)DDELVS(0.0)MS(0.0)VR s:Phosphorylated S MAFK 17579.8 1 1 5580.1 18 HUMAN 1 -2.3142 15.241 GENNNPGSPTVSNFR-p Q99576-3;S42-p GENNNPGSPTVSNFR 0.0492976791411074 0.0207729793369313 -0.581666666666667 -0.315 28.9487184130507 23.0123393892984 -0.581666666666667 -0.315 0.00127387894251946 0.00499765256759748 -6.11853698728 -4.55224303850082 Q99576 TSC22D3 Q99576.3.S42.p_TSC22D3 Q99576-3_S42s _1_1_42_42 Q99576-3 Q99576-3 Isoform 2 of TSC22 domain family protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9520.9520.3 15.16 15.16 3.878 5 1 1 0 710.6535 2049.9787 S42s TMT10 32 (R) GSSGENNNPGsPTVSNFR (Q) GS(0.0)S(0.0)GENNNPGS(0.99)PT(0.0)VS(0.0)NFR s:Phosphorylated S TSC22D3 22669.2 2 3 2467.1 82.09 HUMAN 1 -28.9487 -23.0123 GEPAGEESPGPLQER-p Q9UMN6;S2348-p GEPAGEESPGPLQER 0.770285483322094 0.400250923729947 0.0456666666666667 0.095 2.17110995464533 5.28960393082319 0.0456666666666667 0.095 0.606581281853861 0.29582822445561 0.546370748819413 1.15662918517434 Q9UMN6 KMT2B Q9UMN6.S2348.p_KMT2B Q9UMN6_S2348s _1_1_2348_2348 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18769.18769.4 17.61 17.61 99 1 1 1 0 682.585 2647.3525 S2348s TMT10 2333 (R) GVLDLDRPGEPAGEEsPGPLQER (S) GVLDLDRPGEPAGEES(1.0)PGPLQER s:Phosphorylated S KMT2B 297845.7 2 20 388.1 332.76 HUMAN 1 2.1711 5.2896 GEPEGELSKEDHENT-p Q5JRA6;S876-p GEPEGELSKEDHENT 0.397178308302109 0.202474059703872 -0.114666666666667 0.155333333333333 7.40095972741074 9.12609111388956 -0.114666666666667 0.155333333333333 0.181929877571139 0.122289984122614 -1.53103248441912 1.82952393325356 Q5JRA6 MIA3 Q5JRA6.S876.p_MIA3 Q5JRA6_S876s _1_1_876_876 Q5JRA6 Q5JRA6|Q5JRA6-2 Transport and Golgi organization protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11823.11823.4 18.26 15.25 7.044 4 1 1 0 781.889 3044.5627 S876s TMT10 864 (K) TSGLAGEPEGELsKEDHENTEK (Y) T(0.0)S(0.0)GLAGEPEGELS(0.99)KEDHENT(0.0)EK K:TMT10,s:Phosphorylated S MIA3 214383.2 2 4 378.1 336.1 HUMAN 1 -7.401 9.1261 GEPGSHPSPAPRRSP-p A0A1B0GV68;S427-p GEPGSHPSPAPRRSP 0.213229385106179 0.00490281983834805 0.206666666666667 0.569333333333333 12.9461247282886 33.7053884867474 0.206666666666667 0.569333333333333 0.0507443305226607 0.000426050570640901 2.50136340497783 7.6295648833138 A0A1B0GV68 NotFound A0A1B0GV68.S427.p_NotFound A0A1B0GV68_S427s _1_1_427_427 A0A1B0GV68 Q9Y4F1-2|C9JME2|A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5567.5567.3 19.93 19.93 3.031 3 1 1 0 585.619 1674.8761 S427s TMT10 417 (K) VSAGEPGSHPsPAPR (R) VS(0.0)AGEPGS(0.0)HPS(0.99)PAPR s:Phosphorylated S FARP1 88555.5 7 8 147.1 514.5 HUMAN 1 12.9461 33.7054 GEPGSKQSPPMASSP-p Q8TES7-6;S342-p GEPGSKQSPPMASSP 0.08581207963261 0.667642237110232 0.367 -0.087 22.8212911374215 2.40095684053806 0.367 -0.087 0.00522240906110247 0.575313169986452 4.51230733044539 -0.595798847793432 Q8TES7 FBF1 Q8TES7.6.S342.p_FBF1 Q8TES7-6_S342s _1_1_342_342 Q8TES7-6 Q8TES7-6|K7ENL6|Q8TES7-5|Q8TES7-2|Q8TES7-3|Q8TES7-4 Isoform 6 of Fas-binding factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19380.19380.5 19.48 19.48 2.7 5 1 1 0 751.5837 3673.9251 S342s TMT10 325 (R) FFADSGADPKGEPGSKQsPPMASSPIQPR (K) FFADS(0.0)GADPKGEPGS(0.0)KQS(0.99)PPMAS(0.0)S(0.0)PIQPR K:TMT10,s:Phosphorylated S FBF1 127438.2 2 3 1602.1 128.37 HUMAN 1 22.8213 -2.401 GEPPAPKSPPKARRP-p O95466-2;S1031-p GEPPAPKSPPKARRP 0.198186145676187 0.650751636637033 -0.343666666666667 0.045 13.7031009156759 2.54719989123388 -0.343666666666667 0.045 0.0426275044524055 0.556262791482153 -2.63856725319294 0.626760568082405 O95466 FMNL1 O95466.2.S1031.p_FMNL1 O95466-2_S1031s _1_1_1031_1031 O95466-2 O95466-3|O95466-2|K7EK60 Isoform 2 of Formin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9360.9360.5 20.11 20.11 6.266 2 1 1 0 725.7975 3544.9893 S1031s TMT10 1010 (K) EAAAQEAGADTPGKGEPPAPKsPPKAR (R) EAAAQEAGADT(0.0)PGKGEPPAPKS(0.99)PPKAR K:TMT10,s:Phosphorylated S FMNL1 123091.5 7 3 2364.1 86.46 HUMAN 1 -13.7031 2.5472 GEPPTPPSPAPAPAV-p I3L2J0;S2201-p GEPPTPPSPAPAPAV 0.387019980659876 0.0659085814849842 0.124333333333333 0.209666666666667 7.62983297715826 15.713738050103 0.124333333333333 0.209666666666667 0.172590426628324 0.0268303411618928 1.57087257371523 3.01133516811147 I3L2J0 NotFound I3L2J0.S2201.p_NotFound I3L2J0_S2201s _1_1_2201_2201 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14709.14709.4 23.05 23.05 2.684 7 1 1 0 926.7049 3623.8251 S2201s TMT10 2185 (R) VPGQGLENRGEPPTPPsPAPAPAVAPGGSSESSSGR (A) VPGQGLENRGEPPT(0.0)PPS(0.99)PAPAPAVAPGGS(0.0)S(0.0)ES(0.0)S(0.0)S(0.0)GR s:Phosphorylated S CIC 259056.7 4 37 23.1 999.57 HUMAN 1 7.6298 15.7137 GEPQRLGSETRLPQH-p Q9P275-2;S825-p GEPQRLGSETRLPQH 0.36692872510386 0.0480296145249869 -0.198 -0.291666666666667 8.08375110687533 17.6331645988324 -0.198 -0.291666666666667 0.155462228653774 0.0172458077373835 -1.64968614395187 -3.38570079786721 Q9P275 USP36 Q9P275.2.S825.p_USP36 Q9P275-2_S825s _1_1_825_825 Q9P275-2 Q9P275-2 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6996.6996.3 13.03 8.91 2.294 2 1 1 0 496.2553 1406.7863 S825s Hydrogen 823 (R) LGsETRLPQHIR (E) LGS(0.99)ET(0.0)RLPQHIR s:Phosphorylated S USP36 124218 2 15 241.1 413.35 HUMAN 1 -8.0838 -17.6332 GEQFDFDSGDEIPEA-p O15013;S59-p GEQFDFDSGDEIPEA 0.558156187420407 0.102266344444963 0.103666666666667 0.411666666666667 4.67728811901004 13.0797000019606 0.103666666666667 0.411666666666667 0.340620818416961 0.0492073525520274 1.04457309028984 2.52404339528242 O15013 ARHGEF10 O15013.S59.p_ARHGEF10 O15013_S59s _1_1_59_59 O15013 O15013|O15013-6|O15013-5 Rho guanine nucleotide exchange factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19966.19966.3 22.15 17.14 10.724 3 1 1 0 1158.4588 3393.3988 S59s TMT10 42 (K) YDTNNNEEEEGEQFDFDsGDEIPEADR (Q) Y(0.0)DT(0.0)NNNEEEEGEQFDFDS(0.99)GDEIPEADR s:Phosphorylated S ARHGEF10 152807 1 1 2315.1 88.25 HUMAN 1 4.6773 13.0797 GEQPGWPSPAKAAPV-p P42684-6;S894-p GEQPGWPSPAKAAPV 0.982673656696447 0.00134331567963069 0.00500000000000001 -0.937333333333333 0.1518832955016 46.6822638903814 0.00500000000000002 -0.937333333333334 0.965632046854092 2.14671114477583e-05 0.0451172641943912 -13.5877532150612 P42684 ABL2 P42684.6.S894.p_ABL2 P42684-6_S894s _1_1_894_894 P42684-6 P42684|P42684-3|P42684-6|P42684-2|P42684-5|P42684-10|P42684-7|P42684-4 Isoform 6 of Abelson tyrosine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24836.24836.3 18.12 18.12 99 1 1 1 0 854.4222 2481.2848 S894s TMT10 878 (R) LGMAGVPEDGEQPGWPsPAK (A) LGMAGVPEDGEQPGWPS(1.0)PAK K:TMT10,s:Phosphorylated S ABL2 127186.4 1 11 615.1 261.3 HUMAN 1 0.1519 -46.6823 GEQQETASRELVKEP-p Q14980;S934-p GEQQETASRELVKEP 0.855856838033951 0.119736570141193 -0.0376666666666667 0.198333333333333 1.3153912148016 12.1540127721216 -0.0376666666666667 0.198333333333333 0.738687718610113 0.060897396053986 -0.351221497843955 2.35848768686586 Q14980 NUMA1 Q14980.S934.p_NUMA1 Q14980_S934s _1_1_934_934 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-3|Q14980-4 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7943.7943.4 10.45 10.45 1.176 2 1 1 0 611.0903 2361.3705 S934s TMT10 925 (R) KAGEQQETAsRELVK (E) KAGEQQET(0.0)AS(0.99)RELVK K:TMT10,s:Phosphorylated S NUMA1 239339.3 1 10 31.1 900.97 HUMAN 1 -1.3154 12.154 GEQREAGTPSLDSEA-p Q86UU0;T129-p GEQREAGTPSLDSEA 0.427279371729337 0.436590223286727 0.251 0.0983333333333334 6.80335912906545 4.7951782353697 0.251 0.0983333333333334 0.208768075184998 0.331498964745363 1.4265464371718 1.06617816252062 Q86UU0 BCL9L Q86UU0.T129.p_BCL9L Q86UU0_T129t _1_1_129_129 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8487.8487.2 10.5 10.5 5.587 3 1 1 0 757.3534 1433.7321 T129t Hydrogen 126 (R) EAGtPSLDSEAK (E) EAGT(0.99)PS(0.0)LDS(0.0)EAK K:TMT10-Lys-Only,t:Phosphorylated T BCL9L 157526.3 2 6 139.1 524.37 HUMAN 1 6.8034 4.7952 GERAKGPSPPGAKRR-p Q96S55;S65-p GERAKGPSPPGAKRR 0.578036669021413 0.0102144007325244 0.083 0.404666666666667 4.38020749854127 27.9610401405736 0.083 0.404666666666667 0.364736520016674 0.00159917497839098 0.989144008581857 5.82654744414621 Q96S55 WRNIP1 Q96S55.S65.p_WRNIP1 Q96S55_S65s _1_1_65_65 Q96S55 Q96S55|Q96S55-2 ATPase WRNIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7939.8146.3 14.69 12.29 99 1 1 1 0 559.6621 1597.004 S65s TMT10 61 (R) AKGPsPPGAK (R) AKGPS(1.0)PPGAK K:TMT10,s:Phosphorylated S WRNIP1 72873.4 11 1 519.1 284.6 HUMAN 1 4.3802 27.961 GERAQKRSGNFSAAM-p P18583-5;S2357-p GERAQKRSGNFSAAM 0.894469503669456 0.0331728712819652 -0.025 -0.287 0.947103115032602 19.9449331119488 -0.025 -0.287 0.804062278951867 0.0101276034676639 -0.260556656844285 -3.86353980371091 P18583 SON P18583.5.S2357.p_SON P18583-5_S2357s _1_1_2357_2357 P18583-5 P18583-9|P18583-5|P18583-7|P18583-2|J3QSZ5 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10618.10618.2 7.81 7.81 4.814 2 1 1 0 611.2798 1141.5873 S2357s Hydrogen 2357 (R) sGNFSAAMK (D) S(0.99)GNFS(0.0)AAMK K:TMT10-Lys-Only,s:Phosphorylated S SON 267429.6 1 41 45.1 778.56 HUMAN 1 -0.9471 -19.9449 GERCRDDSFFGETSH-p A8MXP9;S234-p GERCRDDSFFGETSH 0.614105733296323 0.0739259245744148 -0.216 -0.527333333333333 3.92901270265854 15.0151175984603 -0.216 -0.527333333333333 0.404667875852221 0.0315128904829885 -0.903535795224412 -2.87940571610111 A8MXP9 NotFound A8MXP9.S234.p_NotFound A8MXP9_S234s _1_1_234_234 A8MXP9 A8MXP9|P43243|D6REM6 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9918.9918.5 19.38 19.38 3.797 4 1 1 0 508.4318 2458.161 S234s TMT10 230 (R) CRDDsFFGETSHNYHK (F) CRDDS(0.99)FFGET(0.0)S(0.0)HNY(0.0)HK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MATR3 100478.9 3 16 92.1 615.57 HUMAN 1 -3.929 -15.0151 GERGPPGSRGERGQP-p P25940;S837-p GERGPPGSRGERGQP 0.886483152928741 0.329600189427322 -0.0226666666666667 0.130333333333333 1.02020895184008 6.38266979489841 -0.0226666666666667 0.130333333333333 0.790640587042199 0.230002745695507 -0.278939976334125 1.35211729952465 P25940 COL5A3 P25940.S837.p_COL5A3 P25940_S837sT847t_2_2_837_847 P25940 P25940 Collagen alpha-3(V) chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9307.9307.5 7.35 3.33 99 2 2 2 0 843.4229 4053.1469 S837s T847t TMT10 833 (R) GPPGsRGERGQPGAtGQPGPKGDVGQDGAPGIPGEK (G) GPPGS(1.0)RGERGQPGAT(1.0)GQPGPKGDVGQDGAPGIPGEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T COL5A3 172802.2 1 1 7184.1 7.35 HUMAN 1 -1.0202 6.3827 GERGRSASPPQKRLQ-p P55199;S319-p GERGRSASPPQKRLQ 0.0922043466391237 0.924506651490123 0.450333333333333 -0.0103333333333333 22.0552351254504 0.481039335606889 0.450333333333333 -0.0103333333333333 0.00622983418420713 0.895150516191652 4.33457159995004 -0.138093097547543 P55199 ELL P55199.S319.p_ELL P55199_S319s _1_1_319_319 P55199 P55199|U3KQ90 RNA polymerase II elongation factor ELL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6333.6333.2 9.85 2.96 2.491 2 1 1 0 626.8389 1172.7039 S319s TMT10 317 (R) SAsPPQK (R) S(0.0)AS(0.99)PPQK K:TMT10,s:Phosphorylated S ELL 69005.2 5 2 1646.1 123.88 HUMAN 1 22.0552 -0.481 GERKRSLSPLIKFSP-p Q7Z4H7;S908-p GERKRSLSPLIKFSP 0.48509246861068 0.0605828742029587 0.0936666666666667 -0.316333333333333 5.78922456512614 16.2203584491122 0.0936666666666667 -0.316333333333333 0.263680214608077 0.0238761421075375 1.24692318288901 -3.10838258894328 Q7Z4H7 HAUS6 Q7Z4H7.S908.p_HAUS6 Q7Z4H7_S908s _1_1_908_908 Q7Z4H7 Q7Z4H7|Q7Z4H7-3|Q5VY60 HAUS augmin-like complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22280.22280.2 10.68 1.03 1.841 2 1 1 0 648.3912 1215.8077 S908s TMT10 906 (R) SLsPLIK (F) S(0.0)LS(0.99)PLIK K:TMT10,s:Phosphorylated S HAUS6 109703.4 4 8 1302.1 156.27 HUMAN 1 5.7892 -16.2204 GERPLAASPPGTVKA-p M0QXA7;S834-p GERPLAASPPGTVKA 0.189785517203716 0.138046624646755 -0.452666666666667 -0.465 14.1215354066708 11.3319644132569 -0.452666666666667 -0.465 0.0387120757878087 0.0735874169489969 -2.71525999065564 -2.21333936379998 M0QXA7 WIZ M0QXA7.S834.p_WIZ M0QXA7_S834s _1_1_834_834 M0QXA7 O95785|M0QXA7|O95785-3|O95785-4|B9EGQ5|O95785-2 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11740.11740.3 15.73 9.52 2.443 2 1 1 0 744.731 2152.2126 S834s TMT10 823 (R) AADGGERPLAAsPPGTVK (A) AADGGERPLAAS(0.99)PPGT(0.0)VK K:TMT10,s:Phosphorylated S WIZ 104190.1 1 18 195.1 461.51 HUMAN 1 -14.1215 -11.332 GERPYECSDCGKSFT-p Q9H707;S327-p GERPYECSDCGKSFT 0.450118444429121 0.00816609575623382 0.165 0.450333333333333 6.40329848762691 29.730381616132 0.165 0.450333333333334 0.228912838826224 0.00106404951570053 1.35610386892936 6.34057768303823 Q9H707 ZNF552 Q9H707.S327.p_ZNF552 Q9H707_S327s _1_1_327_327 Q9H707 M0QY62|Q9H707|Q9NXT0|Q9NXT0-3 Zinc finger protein 552 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5659.5659.3 10.93 10.93 2.156 3 1 1 0 778.3546 2253.0793 S327s TMT10 317 (R) VHTGERPYECsDCGK (S) VHT(0.0)GERPY(0.0)ECS(0.99)DCGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF552 47452.6 1 7 3243.1 56.13 HUMAN 1 6.4033 29.7304 GERRNSFSENEKHTH-p Q9HCG8;S831-p GERRNSFSENEKHTH 0.019376665224519 0.00203605351766751 0.946333333333333 0.823333333333333 40.0921071580486 42.0103015087664 0.946333333333333 0.823333333333333 9.79014860885916e-05 6.29462480933219e-05 10.1965055151233 11.0735892667137 Q9HCG8 CWC22 Q9HCG8.S831.p_CWC22 Q9HCG8_S831s _1_1_831_831 Q9HCG8 Q9HCG8 Pre-mRNA-splicing factor CWC22 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8976.8976.2 10.91 10.91 2.846 2 1 1 0 746.8585 1412.7422 S831s TMT10 828 (R) NSFsENEK (H) NS(0.0)FS(0.99)ENEK K:TMT10,s:Phosphorylated S CWC22 106034.9 2 5 1128.1 174.64 HUMAN 1 40.0921 42.0103 GERTCSASPGCCGSM-p Q13572;S358-p GERTCSASPGCCGSM 0.594040315504799 0.0670960812017507 -0.086 0.211 4.17181155750983 15.6055822273937 -0.086 0.211 0.382665090259463 0.0275069081492549 -0.949832332314135 2.99077005354628 Q13572 ITPK1 Q13572.S358.p_ITPK1 Q13572_S358s _1_1_358_358 Q13572 Q13572|G3V4M9 Inositol-tetrakisphosphate 1-kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20000.20000.3 16.04 16.04 1.646 4 1 1 0 909.3801 2646.1643 S358s TMT10 354 (R) TCSAsPGCCGSMMGQDAPWK (A) T(0.0)CS(0.0)AS(0.99)PGCCGS(0.0)MMGQDAPWK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ITPK1 46190.8 4 2 2511.1 80.49 HUMAN 1 -4.1718 15.6056 GERVRQLSGQSTSSD-p Q9UGU0;S538-p GERVRQLSGQSTSSD 0.930920423214409 0.0232049508298607 -0.02 -0.363 0.617163936056801 22.3110862910001 -0.02 -0.363 0.867528210909226 0.00587342423518302 -0.174884016954043 -4.38870587985111 Q9UGU0 TCF20 Q9UGU0.S538.p_TCF20 Q9UGU0_S538s _1_1_538_538 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9351.9351.3 18.35 12.35 2.37 9 1 1 0 933.8047 2719.4353 S538s TMT10 536 (R) QLsGQSTSSDTTYKGGASEK (A) QLS(0.99)GQS(0.0)T(0.0)S(0.0)S(0.0)DT(0.0)T(0.0)Y(0.0)KGGAS(0.0)EK K:TMT10,s:Phosphorylated S TCF20 213250.7 7 7 197.1 457.96 HUMAN 1 -0.6172 -22.3111 GERWRPHSPDGPRSA-p I1E4Y6;S258-p GERWRPHSPDGPRSA 0.850252688548194 0.136441227843032 -0.0273333333333333 -0.191666666666667 1.36411402897995 11.3976925927962 -0.0273333333333333 -0.191666666666667 0.730446810552762 0.0724820955269178 -0.362873750996559 -2.22488909574131 I1E4Y6 NotFound I1E4Y6.S258.p_NotFound I1E4Y6_S258s _1_1_258_258 I1E4Y6 I1E4Y6|Q6Y7W6-3 GRB10-interacting GYF protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.4620.4620.4 12.6 9.9 99 1 1 1 0 379.1864 1433.7599 S258s TMT10 254 (R) WRPHsPDGPR (S) WRPHS(1.0)PDGPR s:Phosphorylated S GIGYF2 152981.7 13 1 470.2 302.35 HUMAN 1 -1.3641 -11.3977 GERWRPHSPGWREHM-p Q6Y7W6-5;S236-p GERWRPHSPGWREHM 0.45060350179761 0.10165520157496 -0.121 -0.253 6.39266020147723 13.114379181926 -0.121 -0.253 0.229474260960248 0.0488159878052961 -1.35422407602153 -2.53029510758784 Q6Y7W6 GIGYF2 Q6Y7W6.5.S236.p_GIGYF2 Q6Y7W6-5_S236s _1_1_236_236 Q6Y7W6-5 Q6Y7W6-5|Q6Y7W6-4 Isoform 4 of GRB10-interacting GYF protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7337.7548.5 12.22 12.22 99 1 1 1 0 434.809 2090.0452 S236s TMT10 232 (R) WRPHsPGWREHMER (R) WRPHS(1.0)PGWREHMER s:Phosphorylated S GIGYF2 149826.1 4 7 470.1 302.35 HUMAN 1 -6.3927 -13.1144 GESLEMDSDEDDSEE-p Q9H9B1;S348-p GESLEMDSDEDDSEE 0.356784883442257 0.124968232578908 0.127666666666667 0.259333333333333 8.32090751237546 11.9125431699534 0.127666666666667 0.259333333333333 0.147200487655209 0.0643792159100156 1.69078872379264 2.3156862119053 Q9H9B1 EHMT1 Q9H9B1.S348.p_EHMT1 Q9H9B1_S348sS353s_2_2_348_353 Q9H9B1 Q9H9B1|A0A1B0GV09|Q9H9B1-3|Q9H9B1-4|A0A1B0GUD1 Histone-lysine N-methyltransferase EHMT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22553.22553.4 23.55 23.55 2.753 7 2 2 0 1324.5321 5135.1777 S348s S353s TMT10 331 (K) DLGASSLHVNGESLEMDsDEDDsEELEEDDGHGAEQAAAFPTEDSR (T) DLGAS(0.0)S(0.0)LHVNGES(0.0)LEMDS(0.99)DEDDS(0.99)EELEEDDGHGAEQAAAFPT(0.0)EDS(0.0)R s:Phosphorylated S EHMT1 144088.3 1 9 1454.1 140.61 HUMAN 1 8.3209 11.9125 GESLQEASPRLADHG-p A0A0A0MR66;S30-p GESLQEASPRLADHG 0.203469268152067 0.74175303545199 0.203666666666667 0.0476666666666667 13.3997875717345 1.78845950477821 0.203666666666667 0.0476666666666667 0.0457110547906336 0.662451441595728 2.58336226229812 0.461376428217585 A0A0A0MR66 RBM10 A0A0A0MR66.S30.p_RBM10 A0A0A0MR66_S30s _1_1_30_30 A0A0A0MR66 A0A0A0MR66 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6331.6331.2 12.91 7.85 5.546 2 1 1 0 748.851 1416.728 S30s TMT10 21 (R) GGGESLQEAsPR (L) GGGES(0.0)LQEAS(0.99)PR s:Phosphorylated S RBM10 110706.4 4 2 270.1 394.36 HUMAN 1 13.3998 1.7885 GESPRTLSPTPSAEG-p O14639;S431-p GESPRTLSPTPSAEG 0.232660132100402 0.840045603284182 -0.198666666666667 0.0213333333333333 12.1721619593196 1.06456334885186 -0.198666666666667 0.0213333333333333 0.0606434365627878 0.782606886475496 -2.36290902966114 0.289967151622323 O14639 ABLIM1 O14639.S431.p_ABLIM1 O14639_S431s _1_1_431_431 O14639 O14639|O14639-6|A0A0A0MRL6|O14639-2|F8W8M4|O14639-5|O14639-3|O14639-4|J3QSX6 Actin-binding LIM protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8757.8757.3 13.93 13.93 1.337 5 1 1 0 657.9668 1891.9144 S431s Hydrogen 429 (R) TLsPTPSAEGYQDVRDR (M) T(0.0)LS(0.99)PT(0.0)PS(0.0)AEGY(0.0)QDVRDR s:Phosphorylated S ABLIM1 89568.8 6 4 435.1 313.2 HUMAN 1 -12.1722 1.0646 GESPVVQSDEEEVQV-p Q96EV8;S321-p GESPVVQSDEEEVQV 0.21671898036419 0.859610163387837 -0.216333333333333 -0.0183333333333333 12.7948327746881 0.925179248723376 -0.216333333333333 -0.0183333333333333 0.0525432246516043 0.808131573970254 -2.47416178148686 -0.254978806003584 Q96EV8 DTNBP1 Q96EV8.S321.p_DTNBP1 Q96EV8_S316sS321s_2_2_316_321 Q96EV8 Q96EV8|A6NFV8|A0A087WYP9|Q96EV8-3 Dysbindin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20740.20740.3 19.36 19.36 3.808 7 2 2 0 1230.5385 3529.6615 S316s S321s TMT10 309 (R) DISEGGEsPVVQsDEEEVQVDTALATSHTDR (E) DIS(0.0)EGGES(0.99)PVVQS(0.99)DEEEVQVDT(0.0)ALAT(0.0)S(0.0)HT(0.0)DR s:Phosphorylated S DTNBP1 39834.6 3 4 3472.1 50.17 HUMAN 1 -12.7948 -0.9252 GETKTEESPASDEAG-p P05114;S86-p GETKTEESPASDEAG 0.637060831072441 0.00343821341854357 -0.078 0.621333333333333 3.65194766422943 36.8393433535949 -0.078 0.621333333333333 0.431325598467863 0.000207045437456097 -0.849985558292322 8.79665403899063 P05114 HMGN1 P05114.S86.p_HMGN1 P05114_S86s _1_1_86_86 P05114 A6NEL0|P05114|A6NL93 Non-histone chromosomal protein HMG-14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11667.11667.5 23.39 19.5 2.4 5 1 1 0 1009.3132 4962.5676 S86s TMT10 60 (K) GKQAEVANQETKEDLPAENGETKTEEsPASDEAGEK (E) GKQAEVANQET(0.0)KEDLPAENGET(0.0)KT(0.0)EES(0.99)PAS(0.0)DEAGEK K:TMT10,s:Phosphorylated S HMGN1 10658.7 21 3 878.1 208.13 HUMAN 1 -3.6519 36.8393 GETMEEYSTDEDEVD-p Q8N128-2;S93-p GETMEEYSTDEDEVD 0.512276531895754 0.24581520464409 -0.112 0.114 5.36943844061249 8.03142383040413 -0.112 0.114 0.29043981799866 0.157346692023419 -1.17134938867105 1.64008938681617 Q8N128 FAM177A1 Q8N128.2.S93.p_FAM177A1 Q8N128-2_S93sT94t_2_2_93_94 Q8N128-2 Q8N128-2 Isoform 2 of Protein FAM177A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26370.26568.3 28.7 28.7 1.155 5 2 2 0 1159.5101 3316.5819 S93s T94t TMT10 80 (R) VIHFVSGETMEEYstDEDEVDGLEK (K) VIHFVS(0.0)GET(0.0)MEEY(0.0)S(0.99)T(0.99)DEDEVDGLEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T FAM177A1 26101.7 53 2 1328.1 153.52 HUMAN 1 -5.3694 8.0314 GETNDANTPKKCRAL-p E2GH26;T448-p GETNDANTPKKCRAL 0.605173265345025 0.00105578872948118 0.077 -1.19233333333333 4.03100504673696 50.6049348554743 0.077 -1.19233333333333 0.395275134688358 8.69974482655435e-06 0.923051622874654 -16.108220786973 E2GH26 TCF7L2 E2GH26.T448.p_TCF7L2 E2GH26_T448t _1_1_448_448 E2GH26 E2GH26|Q9NQB0-7|A0A0D9SGH8|Q9NQB0-13 T-cell factor-4 variant L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5999.5999.5 13.25 13.25 5.656 2 1 1 0 528.6907 2559.4548 T448t TMT10 437 (R) DKQPGETNDANtPKK (C) DKQPGET(0.0)NDANT(0.99)PKK K:TMT10,t:Phosphorylated T TCF7L2 67013.5 4 3 3511.1 49.37 HUMAN 1 4.031 -50.6049 GETNPADSKPGTIRG-p Q32Q12;S124-p GETNPADSKPGTIRG 0.429324322799591 0.283044454425062 0.165333333333333 -0.161333333333333 6.76156107025772 7.22790577585066 0.165333333333333 -0.161333333333333 0.210787034036072 0.189325635125539 1.4192077359961 -1.50042274766899 Q32Q12 NotFound Q32Q12.S124.p_NotFound Q32Q12_S124s _1_1_124_124 Q32Q12 Q32Q12|P22392-2|J3KPD9|P15531-2|E7ERL0 Nucleoside diphosphate kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16980.16980.3 13.86 13.86 2.504 3 1 1 0 775.4091 2244.2422 S124s TMT10 114 (R) VMLGETNPADsKPGTIR (G) VMLGET(0.0)NPADS(0.99)KPGT(0.0)IR K:TMT10,s:Phosphorylated S NME1-NME2 32926.7 1 3 2569.1 78.26 HUMAN 1 6.7616 -7.2279 GETSNLPSPGKLITS-p Q9H040;S268-p GETSNLPSPGKLITS 0.438926203267109 0.00203605351766751 -0.119 -0.813666666666667 6.58638487285119 42.0200540206263 -0.119 -0.813666666666667 0.219463101633555 6.28050546626813e-05 -1.3883995470942 -11.0783510791861 Q9H040 SPRTN Q9H040.S268.p_SPRTN Q9H040_S268s _1_1_268_268 Q9H040 Q9H040 SprT-like domain-containing protein Spartan HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20117.20117.3 17.2 17.2 6.801 4 1 1 0 686.3629 1977.1057 S268s TMT10 257 (K) GYVLGETSNLPsPGK (L) GY(0.0)VLGET(0.0)S(0.0)NLPS(0.99)PGK K:TMT10,s:Phosphorylated S SPRTN 55703.4 4 1 4283.1 34.3 HUMAN 1 -6.5864 -42.0201 GEVDSNGSDGGEASR-p Q7LBC6;S314-p GEVDSNGSDGGEASR 0.454779686832747 0.0452168370295786 0.109 0.323 6.31317747800247 17.9945341742166 0.109 0.323 0.233712667446494 0.0158688912010669 1.34016757225762 3.45832903910435 Q7LBC6 KDM3B Q7LBC6.S314.p_KDM3B Q7LBC6_S314s _1_1_314_314 Q7LBC6 Q7LBC6 Lysine-specific demethylase 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5637.5637.4 13.39 9.96 2.234 3 1 1 0 726.1237 2821.5007 S314s TMT10 301 (K) KLKGDRGEVDSNGsDGGEASR (G) KLKGDRGEVDS(0.0)NGS(0.99)DGGEAS(0.0)R K:TMT10,s:Phosphorylated S KDM3B 193289 7 4 305.1 374.1 HUMAN 1 6.3132 17.9945 GEVEAQDSDPAPAFS-p P35250;S18-p GEVEAQDSDPAPAFS 0.944141606641181 0.0540123569763715 -0.0136666666666667 0.284666666666667 0.492679980789549 16.8986983561928 -0.0136666666666667 0.284666666666667 0.892754405347628 0.0204234997497737 -0.141286726496897 3.24025843747047 P35250 RFC2 P35250.S18.p_RFC2 P35250_S18s _1_1_18_18 P35250 P35250|P35250-2|F8WC37|F8WDC9 Replication factor C subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27061.27265.3 18.32 18.32 9.966 2 1 1 0 1001.4372 2922.3335 S18s Acetyl 1 (-) MEVEAVCGGAGEVEAQDsDPAPAFSK (A) MEVEAVCGGAGEVEAQDS(0.99)DPAPAFS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RFC2 39613 1 1 3935.1 40.5 HUMAN 1 -0.4927 16.8987 GEVIVRMSPVKQLNP-p O00442-2;S186-p GEVIVRMSPVKQLNP 0.73141571181913 0.133382591319884 -0.0493333333333333 0.23 2.57796859382898 11.5330576679716 -0.0493333333333333 0.23 0.552335733109753 0.0702577493168992 -0.633307389239433 2.24870408716297 O00442 RTCA O00442.2.S186.p_RTCA O00442-2_S186s _1_1_186_186 O00442-2 O00442-2 Isoform 2 of RNA 3'-terminal phosphate cyclase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16429.16429.3 12.38 6.56 99 1 1 1 0 623.0135 1787.0613 S186s TMT10 177 (K) GGGEVIVRMsPVK (Q) GGGEVIVRMS(1.0)PVK K:TMT10,s:Phosphorylated S RTCA 41222.1 1 1 6324.1 12.38 HUMAN 1 -2.578 11.5331 GEVPPKETPKKKKKF-p P49006;T85-p GEVPPKETPKKKKKF 0.266306780221325 0.0552289389191363 -0.227 -0.423666666666667 10.8888406599134 16.7591559306108 -0.227 -0.423666666666667 0.0814921796665954 0.021090380104124 -2.13664631107837 -3.21294284495219 P49006 MARCKSL1 P49006.T85.p_MARCKSL1 P49006_T85t _1_1_85_85 P49006 P49006 MARCKS-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14622.14622.5 24.2 22.62 1.155 5 1 1 0 1119.5824 5513.926 T85t TMT10 44 (K) GEGESPPVNGTDEAAGATGDAIEPAPPSQGAEAKGEVPPKEtPKK (K) GEGES(0.0)PPVNGT(0.0)DEAAGAT(0.0)GDAIEPAPPS(0.0)QGAEAKGEVPPKET(0.99)PKK K:TMT10,t:Phosphorylated T MARCKSL1 19585.5 9 5 402.1 327.42 HUMAN 1 -10.8888 -16.7592 GEVREEASDDDMEGD-p O75643;S225-p GEVREEASDDDMEGD 0.979921167300626 0.0691615624871569 0.0106666666666667 0.665 0.175156677751108 15.4274239406198 0.0106666666666667 0.665 0.960471167433682 0.0286587738850814 0.0518990569528614 2.95700853221897 O75643 SNRNP200 O75643.S225.p_SNRNP200 O75643_S225s _1_1_225_225 O75643 O75643|O75643-2 U5 small nuclear ribonucleoprotein 200 kDa helicase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8052.8052.2 10.11 10.11 99 1 1 1 0 923.8383 1766.7021 S225s Hydrogen 222 (R) EEAsDDDMEGDEAVVR (C) EEAS(1.0)DDDMEGDEAVVR s:Phosphorylated S SNRNP200 246157.8 4 1 2427.1 83.94 HUMAN 1 0.1752 15.4274 GEVSDEDSADEIEDE-p Q4KWH8;S464-p GEVSDEDSADEIEDE 0.963145544211482 0.0579900107935597 0.00699999999999999 -0.435666666666667 0.312918941391695 16.4740777771143 0.00699999999999999 -0.435666666666667 0.930482277794523 0.0225212360366848 0.0913745660507547 -3.15744229071734 Q4KWH8 PLCH1 Q4KWH8.S464.p_PLCH1 Q4KWH8_S460sS464s_2_2_460_464 Q4KWH8 Q4KWH8|Q4KWH8-2|Q4KWH8-4|Q4KWH8-3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19318.19318.5 26.76 26.35 26.758 3 2 2 0 1012.8839 4900.4695 S460s S464s TMT10 443 (K) GKKLPYHLGDDAEEGEVsDEDsADEIEDECKFK (L) GKKLPY(0.0)HLGDDAEEGEVS(0.99)DEDS(0.99)ADEIEDECKFK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PLCH1 191330.6 8 19 201.1 451.38 HUMAN 1 0.3129 -16.4741 GEVSEDQSQNKHSRH-p Q13523;S36-p GEVSEDQSQNKHSRH 0.161896267971782 0.0175829381598002 -0.229333333333333 0.343 15.8305727679229 24.1888989131757 -0.229333333333333 0.343 0.0261181687303012 0.00381162449017435 -3.03572565165058 4.83545814257501 Q13523 PRPF4B Q13523.S36.p_PRPF4B Q13523_S32sS36s_2_2_32_36 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10885.10885.3 11.23 11.23 11.228 3 2 2 0 842.3657 2365.1519 S32s S36s TMT10 23 (K) SINEENGEVsEDQsQNK (H) S(0.0)INEENGEVS(0.99)EDQS(0.99)QNK K:TMT10,s:Phosphorylated S PRPF4B 117327.1 2 31 70.1 666.55 HUMAN 1 -15.8306 24.1889 GEVSKAASADSTTEG-p O75367;S170-p GEVSKAASADSTTEG 0.133453192058963 0.440897459608939 -0.323666666666667 0.077 18.0070752499493 4.73662321261277 -0.323666666666667 0.077 0.0158231328718232 0.335998763176116 -3.46369732378584 1.05536029025756 O75367 H2AFY O75367.S170.p_H2AFY O75367_S170s _1_1_170_170 O75367 O75367|O75367-3 Core histone macro-H2A.1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23114.23114.3 13.78 13.3 1.15 8 1 1 0 889.1052 2585.3347 S170s TMT10 168 (K) AAsADSTTEGTPADGFTVLSTK (S) AAS(0.99)ADS(0.0)T(0.0)T(0.0)EGT(0.0)PADGFT(0.0)VLS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S H2AFY 39787.5 1 3 1399.1 146.47 HUMAN 1 -18.0071 4.7366 GEVSRANTPDSDITE-p Q9H4L7-2;T54-p GEVSRANTPDSDITE 0.627614753378983 0.218400004885306 -0.0696666666666667 0.123666666666667 3.75947318092283 8.69464244243868 -0.0696666666666667 0.123666666666667 0.42077766754503 0.135062802138901 -0.87086410992979 1.75489694289286 Q9H4L7 SMARCAD1 Q9H4L7.2.T54.p_SMARCAD1 Q9H4L7-2_T54tS57s_2_2_54_57 Q9H4L7-2 Q9H4L7-2|D6RAY8 Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13374.13374.4 22.63 22.63 3.781 7 2 2 0 874.148 3333.6334 T54t S57s Hydrogen 52 (R) ANtPDsDITEKTEDSSVPETPDNERK (A) ANT(0.99)PDS(0.99)DIT(0.0)EKT(0.0)EDS(0.0)S(0.0)VPET(0.0)PDNERK K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S SMARCAD1 118399.2 3 12 250.1 406.83 HUMAN 1 -3.7595 8.6946 GEVTGSPSPPPRSGA-p O94875-12;S346-p GEVTGSPSPPPRSGA 0.792181181183661 0.0143848871707999 0.0393333333333333 0.417333333333333 1.9519465738745 25.5397758952262 0.0393333333333333 0.417333333333333 0.637977470898326 0.00279268794588961 0.498133770176353 5.17515557284571 O94875 SORBS2 O94875.12.S346.p_SORBS2 O94875-12_S346s _1_1_346_346 O94875-12 O94875-10|O94875-12|O94875-4|O94875-3|O94875-5 Isoform 12 of Sorbin and SH3 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11274.11274.3 16.84 11.85 1.391 7 1 1 0 815.0768 2363.2517 S346s TMT10 338 (R) LGEVTGSPsPPPRSGAPTPSSR (A) LGEVT(0.0)GS(0.0)PS(0.99)PPPRS(0.0)GAPT(0.0)PS(0.0)S(0.0)R s:Phosphorylated S SORBS2 81021.6 4 6 962.1 194.05 HUMAN 1 1.9519 25.5398 GEVVGCFTPQSRRLR-p Q9Y446-2;T586-p GEVVGCFTPQSRRLR 0.23918495849275 0.261741524823828 0.172333333333333 0.113 11.877535621661 7.66907774680868 0.172333333333333 0.113 0.0649002601766949 0.171037848676515 2.31063150072191 1.57721789834389 Q9Y446 PKP3 Q9Y446.2.T586.p_PKP3 Q9Y446-2_T586t _1_1_586_586 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19914.19914.3 19.31 17.66 2.475 2 1 1 0 756.3641 2187.1066 T586t TMT10 572 (R) DLAGAPPGEVVGCFtPQSR (R) DLAGAPPGEVVGCFT(0.99)PQS(0.0)R C:Carbamidomethylation,t:Phosphorylated T PKP3 89109.7 2 15 454.1 307.47 HUMAN 1 11.8775 7.6691 GEVVKELSVEEQIKR-p Q9UHB6-4;S742-p GEVVKELSVEEQIKR 0.110880621512576 0.0149802667695485 -0.535333333333333 0.408666666666667 19.972785981457 25.2542497905912 -0.535333333333333 0.408666666666667 0.0100628593341764 0.00298246270030047 -3.87311237966876 5.10200746737855 Q9UHB6 LIMA1 Q9UHB6.4.S742.p_LIMA1 Q9UHB6-4_S742s _1_1_742_742 Q9UHB6-4 Q9UHB6-4|Q9UHB6-5|Q9UHB6-2|F8VQE1|Q9UHB6-3|F8VS07 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17902.17902.2 14.06 7.12 99 1 1 1 0 806.9321 1532.8936 S742s TMT10 740 (K) ELsVEEQIK (R) ELS(1.0)VEEQIK K:TMT10,s:Phosphorylated S LIMA1 85678.4 3 33 42.1 822.82 HUMAN 1 -19.9728 25.2542 GEWFLLGSPGS____-p Q96T76-8;S1048-p GEWFLLGSPGS____ 0.988589863314434 0.0543243059012832 -0.00266666666666667 -0.228666666666667 0.101777076582208 16.8644438456278 -0.00266666666666666 -0.228666666666667 0.97683742998467 0.0205852248656439 -0.0304004884923183 -3.23354391348544 Q96T76 MMS19 Q96T76.8.S1048.p_MMS19 Q96T76-8_S1048s _1_1_1048_1048 Q96T76-8 Q96T76-8|Q96T76-9|Q96T76-5 Isoform 5 of MMS19 nucleotide excision repair protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.35029.35431.2 11.94 11.94 1.403 2 1 1 0 729.8461 1378.7204 S1048s TMT10 1041 (R) GEWFLLGsPGS (-) GEWFLLGS(0.99)PGS(0.0) s:Phosphorylated S MMS19 117414.9 2 1 6382.1 11.94 HUMAN 1 -0.1018 -16.8644 GEYNSNMSPEEKMMK-p P78316;S96-p GEYNSNMSPEEKMMK 0.936107507392066 0.00151955542265595 -0.0126666666666667 -1.00133333333333 0.561328680957965 45.4677281171033 -0.0126666666666667 -1.00133333333333 0.87875362973084 2.83940399006417e-05 -0.15990744820067 -12.886928170199 P78316 NOP14 P78316.S96.p_NOP14 P78316_S96s _1_1_96_96 P78316 P78316|P78316-2|E9PFK5 Nucleolar protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11513.11513.3 15.51 12.94 5.73 3 1 1 0 742.6818 2146.0639 S96s TMT10 87 (K) RFGEYNSNMsPEEK (M) RFGEY(0.0)NS(0.0)NMS(0.99)PEEK K:TMT10,s:Phosphorylated S NOP14 98351.3 16 1 2153.1 95.6 HUMAN 1 -0.5613 -45.4677 GEYSRSPTF______-p Q6UWZ7;T408-p GEYSRSPTF______ 0.87289946291738 0.0160072688207601 -0.0316666666666667 0.396 1.15540522866973 24.8032429902129 -0.0316666666666667 0.396 0.7664070254181 0.00330883949530631 -0.31241841738942 4.98795443958279 Q6UWZ7 FAM175A Q6UWZ7.T408.p_FAM175A Q6UWZ7_T408t _1_1_408_408 Q6UWZ7 Q6UWZ7|D6REL5|Q6UWZ7-2 BRCA1-A complex subunit Abraxas 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17951.17951.2 8.72 8.72 1.12 4 1 1 0 778.8526 1476.7321 T408t TMT10 399 (K) GFGEYSRSPtF (-) GFGEY(0.0)S(0.0)RS(0.0)PT(0.99)F t:Phosphorylated T ABRAXAS1 47061.3 5 4 2650.1 75.21 HUMAN 1 -1.1554 24.8032 GFAEAIHSPQVAGVP-p P12270;S2155-p GFAEAIHSPQVAGVP 0.339100956339771 0.0865345945846366 -0.153333333333333 -0.278333333333333 8.73784098857524 14.0703680553797 -0.153333333333333 -0.278333333333333 0.133726014447081 0.0391708679219731 -1.76298284077339 -2.70421525600877 P12270 TPR P12270.S2155.p_TPR P12270_S2155s _1_1_2155_2155 P12270 P12270 Nucleoprotein TPR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17352.17352.3 8.36 8.36 8.359 2 1 1 0 721.0297 2081.0977 S2155s TMT10 2146 (R) TDGFAEAIHsPQVAGVPR (F) T(0.0)DGFAEAIHS(0.99)PQVAGVPR s:Phosphorylated S TPR 267687.4 1 20 385.1 333.55 HUMAN 1 -8.7378 -14.0704 GFAMLAESPHTRRKE-p Q8TF44;S156-p GFAMLAESPHTRRKE 0.743322211178279 0.156795614180223 0.0836666666666667 -0.197666666666667 2.44842190671071 10.5810991968973 0.0836666666666667 -0.197666666666667 0.569059672156207 0.087476234534786 0.60596766497366 -2.08197566528567 Q8TF44 C2CD4C Q8TF44.S156.p_C2CD4C Q8TF44_S156s _1_1_156_156 Q8TF44 Q8TF44 C2 calcium-dependent domain-containing protein 4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19173.19173.3 15.27 15.27 1.461 5 1 1 0 726.0101 2096.0432 S156s TMT10 144 (K) AQTSYGFAMLAEsPHTR (R) AQT(0.0)S(0.0)Y(0.0)GFAMLAES(0.99)PHT(0.0)R s:Phosphorylated S C2CD4C 44803.7 1 1 5927.1 15.27 HUMAN 1 2.4484 -10.5811 GFARASPSPPAHAEH-p O75385;S479-p GFARASPSPPAHAEH 0.306684187031916 0.485567943477638 -0.202333333333333 0.0716666666666667 9.60666652641089 4.19082187176222 -0.202333333333333 0.0716666666666667 0.109479636647628 0.380993716189912 -1.91344841841557 0.953266943857103 O75385 ULK1 O75385.S479.p_ULK1 O75385_S479s _1_1_479_479 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6375.6375.4 14.38 14.38 1.413 2 1 1 0 491.4991 1883.0085 S479s TMT10 476 (R) ASPsPPAHAEHGGVLAR (K) AS(0.0)PS(0.99)PPAHAEHGGVLAR s:Phosphorylated S ULK1 113656.3 2 7 351.1 351.01 HUMAN 1 -9.6067 4.1908 GFATHAASINPTELV-p P16144;S809-p GFATHAASINPTELV 0.557101429711056 0.424386659462988 -0.0896666666666667 -0.0836666666666666 4.69167456632525 4.95559415197697 -0.0896666666666667 -0.0836666666666666 0.339494344052959 0.319477726206916 -1.04724032529972 -1.09569438330849 P16144 ITGB4 P16144.S809.p_ITGB4 P16144_S809s_1_1_809_809 P16144 P16144|P16144-3|P16144-2|P16144-4|P16144-5 Integrin beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27282.27282.4 16.93 16.93 2.399 6 1 1 0 891.9573 3483.8368 S809s N811n TMT10 794 (K) VTNNMQRPGFATHAAsInPTELVPYGLSLR (L) VT(0.0)N(0.0)N(0.0)MQRPGFAT(0.0)HAAS(0.99)IN(0.99)PT(0.0)ELVPY(0.0)GLS(0.0)LR s:Phosphorylated S,n:Deamidated ITGB4 205872.1 3 1 708.1 238.91 HUMAN 1 -4.6917 -4.9556 GFDDLSESEDDEDDD-p Q7Z5K2-2;S504-p GFDDLSESEDDEDDD 0.112058482314053 0.045126199424065 0.389666666666667 -0.280666666666667 19.8597144854576 18.0062552113295 0.389666666666667 -0.280666666666667 0.0103282930395152 0.0158261208916321 3.84890806270618 -3.46069691013188 Q7Z5K2 WAPL Q7Z5K2.2.S504.p_WAPL Q7Z5K2-2_S502sS504s_2_2_502_504 Q7Z5K2-2 Q7Z5K2-3|Q7Z5K2-2 Isoform 2 of Wings apart-like protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24452.24655.5 19.86 19.86 9.263 3 2 2 0 687.0794 3271.4261 S502s S504s TMT10 495 (K) YFGFDDLsEsEDDEDDDCQVERK (T) Y(0.0)FGFDDLS(0.99)ES(0.99)EDDEDDDCQVERK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WAPL 138966.1 12 19 244.1 413.16 HUMAN 1 19.8597 -18.0063 GFDSDDESA______-p A0A1B0GWA0;S1127-p GFDSDDESA______ 0.93643415136057 0.0176132702445954 0.014 0.338 0.555118063342814 24.1656011987519 0.014 0.338 0.88001118817939 0.00383212688163239 0.158232360469876 4.82973870882621 A0A1B0GWA0 NotFound A0A1B0GWA0.S1127.p_NotFound A0A1B0GWA0_S1127s _1_1_1127_1127 A0A1B0GWA0 A0A1B0GWA0|Q8IZM8 Zinc finger protein 654 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22609.22609.2 18.66 18.66 1.211 3 1 1 0 1129.5079 2178.0425 S1127s TMT10 1114 (K) KCQTLFGFDSDDEsA (-) KCQT(0.0)LFGFDS(0.0)DDES(0.99)A K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF654 130327.2 3 4 2529.1 79.79 HUMAN 1 0.5551 24.1656 GFEEHVPSDNS____-p P62699;S118-p GFEEHVPSDNS____ 0.351485099137188 0.213130469918843 -0.174666666666667 0.180333333333333 8.43834220609912 8.83232739131681 -0.174666666666667 0.180333333333333 0.14327347000449 0.130848051819874 -1.71112939542052 1.7787115554365 P62699 YPEL5 P62699.S118.p_YPEL5 P62699_S118sS121s_2_2_118_121 P62699 P62699 Protein yippee-like 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11768.11768.2 12.92 12.92 12.921 3 2 2 0 976.3663 1791.7871 S118s S121s TMT10 108 (R) ESEGFEEHVPsDNs (-) ES(0.0)EGFEEHVPS(0.99)DNS(0.99) s:Phosphorylated S YPEL5 14069.6 2 2 5818.1 16.04 HUMAN 1 -8.4383 8.8323 GFGLEHVSREQIREV-p Q6VY07-2;S355-p GFGLEHVSREQIREV 0.579061042996434 0.0143328594924759 0.189 -0.413666666666667 4.36364862657149 25.5653319144559 0.189 -0.413666666666667 0.366129849714165 0.0027763026559355 0.986033866582095 -5.18173882824474 Q6VY07 PACS1 Q6VY07.2.S355.p_PACS1 Q6VY07-2_S355s _1_1_355_355 Q6VY07-2 Q6VY07-2 Isoform 2 of Phosphofurin acidic cluster sorting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16915.16915.4 13.53 10.99 4.795 2 1 1 0 592.2974 2286.204 S355s TMT10 343 (K) VSDEVGFGLEHVsREQIR (E) VS(0.0)DEVGFGLEHVS(0.99)REQIR s:Phosphorylated S PACS1 109968.1 1 3 786.1 225.23 HUMAN 1 4.3636 -25.5653 GFGPGDRSHLDSPEA-p Q9BTD8;S131-p GFGPGDRSHLDSPEA 0.22382020661247 0.781497329063286 0.199 -0.0376666666666666 12.4920703850756 1.48217647085547 0.199 -0.0376666666666666 0.0563369020388993 0.710857177632704 2.41993075145452 -0.390765357663134 Q9BTD8 RBM42 Q9BTD8.S131.p_RBM42 Q9BTD8_S131s _1_1_131_131 Q9BTD8 Q9BTD8|K7EP90|Q9BTD8-3|Q9BTD8-2|Q9BTD8-4|K7ER08 RNA-binding protein 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28113.28113.4 15.85 15.85 1.142 3 1 1 0 973.9875 3812.9744 S131s TMT10 103 (R) AAAAATVVPPMVGGPPFVGPVGFGPGDRsHLDSPEAR (E) AAAAAT(0.0)VVPPMVGGPPFVGPVGFGPGDRS(0.99)HLDS(0.0)PEAR s:Phosphorylated S RBM42 50527.2 3 1 4006.1 39.25 HUMAN 1 12.4921 -1.4822 GFGRKVFSPVIRSSF-p I3L2J0;S1405-p GFGRKVFSPVIRSSF 0.150283451076775 0.40655990076254 0.422666666666667 -0.0793333333333333 16.5880696108119 5.20291084865438 0.422666666666667 -0.0793333333333333 0.0219377982865611 0.301792828296986 3.18193611970216 -1.14087730852219 I3L2J0 NotFound I3L2J0.S1405.p_NotFound I3L2J0_S1405s _1_1_1405_1405 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21809.22015.2 11.37 4.66 99 1 1 1 0 563.8153 1046.656 S1405s TMT10 1403 (K) VFsPVIR (S) VFS(1.0)PVIR s:Phosphorylated S CIC 259056.7 5 24 23.1 999.57 HUMAN 1 16.5881 -5.2029 GFGVSRRSPASIDRQ-p O43166;S1181-p GFGVSRRSPASIDRQ 0.518207869341824 0.0637634267889822 -0.0853333333333333 -0.209666666666667 5.2747539899362 15.9159173282328 -0.0853333333333334 -0.209666666666667 0.296841488726509 0.025609922674288 -1.15417827146418 -3.04992108462851 O43166 SIPA1L1 O43166.S1181.p_SIPA1L1 O43166_S1181s _1_1_1181_1181 O43166 O43166|O43166-2|O43166-3|F5GYF8 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6839.6839.3 19.04 16.2 4.043 5 1 1 0 743.0229 2147.089 S1181s Hydrogen 1181 (R) sPASIDRQNTQSDIGGSGK (S) S(0.99)PAS(0.0)IDRQNT(0.0)QS(0.0)DIGGS(0.0)GK K:TMT10-Lys-Only,s:Phosphorylated S SIPA1L1 201223.1 9 14 46.1 777.88 HUMAN 1 -5.2748 -15.9159 GFHKQRRSLDTPQSL-p Q9ULE0;S442-p GFHKQRRSLDTPQSL 0.350515030702297 0.0163034950891125 0.141 0.467333333333333 8.45852333714213 24.6905089860727 0.141 0.467333333333333 0.142609240282743 0.00339585471392934 1.71462430128184 4.95972616724482 Q9ULE0 WWC3 Q9ULE0.S442.p_WWC3 Q9ULE0_S442s _1_1_442_442 Q9ULE0 Q9ULE0|Q9ULE0-2 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19996.19996.2 15.32 5.67 4.597 6 1 1 0 885.9456 1690.9173 S442s TMT10 442 (R) sLDTPQSLASLSSR (S) S(0.99)LDT(0.0)PQS(0.0)LAS(0.0)LS(0.0)S(0.0)R s:Phosphorylated S WWC3 123814.7 2 12 161.1 495.35 HUMAN 1 8.4585 24.6905 GFIARMCSPSPDATS-p Q5JTW2-2;S671-p GFIARMCSPSPDATS 0.6525879959072 0.050124945718593 0.106333333333333 0.271666666666667 3.47578930428701 17.3758191948053 0.106333333333333 0.271666666666667 0.449180681344868 0.0182986091335954 0.815499155285376 3.33441478404549 Q5JTW2 CEP78 Q5JTW2.2.S671.p_CEP78 Q5JTW2-2_S671s _1_1_671_671 Q5JTW2-2 Q5JTW2-2|Q5JTW2-5 Isoform 2 of Centrosomal protein of 78 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8371.8371.4 12.16 12.16 1.181 7 1 1 0 762.8596 2968.4505 S671s TMT10 669 (R) MCsPSPDATSGTGSQRKEEELSR (N) MCS(0.99)PS(0.0)PDAT(0.0)S(0.0)GT(0.0)GS(0.0)QRKEEELS(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CEP78 80985 1 5 2272.1 90.44 HUMAN 1 3.4758 17.3758 GFIDQNLSPTKGNIS-p Q14188;S24-p GFIDQNLSPTKGNIS 0.199032885103621 0.00224652614039878 -0.215333333333333 -0.927666666666667 13.6468184045755 41.0448320644063 -0.215333333333333 -0.927666666666667 0.04318353189615 7.8617059067605e-05 -2.62829945073535 -10.611444246596 Q14188 TFDP2 Q14188.S24.p_TFDP2 Q14188_S24s _1_1_24_24 Q14188 Q14188|F8WAY9 Transcription factor Dp-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19308.19308.3 11.52 11.52 2.829 2 1 1 0 586.646 1677.9576 S24s TMT10 17 (R) GFIDQNLsPTK (G) GFIDQNLS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S TFDP2 49634.9 3 1 4743.1 27.16 HUMAN 1 -13.6468 -41.0448 GFIELFQTPSHTKES-p P46013;T1719-p GFIELFQTPSHTKES 0.902006058729547 0.0431093755662632 0.019 -0.330333333333333 0.880218260060164 18.2939428093258 0.019 -0.330333333333333 0.816541334033347 0.0148117276905018 0.24355653610916 -3.51905935867694 P46013 MKI67 P46013.T1719.p_MKI67 P46013_T1719t _1_1_1719_1719 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36098.36098.4 24.88 24.88 2.669 4 1 1 0 721.6145 2803.4918 T1719t TMT10 1704 (K) SEVPEDLAGFIELFQtPSHTK (E) S(0.0)EVPEDLAGFIELFQT(0.99)PS(0.0)HT(0.0)K K:TMT10,t:Phosphorylated T MKI67 360912.4 2 54 5.1 1918.46 HUMAN 1 0.8802 -18.2939 GFIEQKGSPTSAYPE-p Q6ZRV2;S903-p GFIEQKGSPTSAYPE 0.688148440533523 0.477100448087248 0.0613333333333333 -0.0683333333333333 3.04833004105921 4.28638463275013 0.0613333333333333 -0.0683333333333333 0.495640739062716 0.372701839903688 0.730211694264712 -0.971318249667523 Q6ZRV2 FAM83H Q6ZRV2.S903.p_FAM83H Q6ZRV2_S903s _1_1_903_903 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15627.15627.4 16.54 16.54 1.31 7 1 1 0 687.8471 2668.3983 S903s TMT10 891 (R) GSPTTGFIEQKGsPTSAYPER (R) GS(0.0)PT(0.0)T(0.0)GFIEQKGS(0.99)PT(0.0)S(0.0)AY(0.0)PER K:TMT10,s:Phosphorylated S FAM83H 127633.5 9 21 7.1 1347.23 HUMAN 1 3.0483 -4.2864 GFILLGFSNHPKMEM-p Q9Y3N9;S18-p GFILLGFSNHPKMEM 0.318061545883325 0.362869060997082 0.192666666666667 0.093 9.31676487926419 5.83768867517811 0.192666666666667 0.093 0.117037089213692 0.260754091982047 1.86321141734304 1.25530358350372 Q9Y3N9 OR2W1 Q9Y3N9.S18.p_OR2W1 Q9Y3N9_S18s_1_1_18_18 Q9Y3N9 Q9Y3N9 Olfactory receptor 2W1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29104.29104.3 7.83 1.7 2.787 5 1 1 0 948.7717 2763.3762 N5n S18s Acetyl 1 (-) MDQSnYSSLHGFILLGFsNHPK (M) MDQS(0.0)N(0.99)Y(0.0)S(0.0)S(0.0)LHGFILLGFS(0.99)N(0.0)HPK K:TMT10,n:Deamidated,s:Phosphorylated S OR2W1 36728.3 1 1 7083.1 7.83 HUMAN 1 9.3168 5.8377 GFITNNSSKTRAAYA-p A6NDG6;S71-p GFITNNSSKTRAAYA 0.770066539694405 0.535009424266658 0.0423333333333333 -0.099 2.17347717566718 3.6544648020912 0.0423333333333333 -0.099 0.606250740998633 0.431075677857038 0.546886057104317 -0.850340661342144 A6NDG6 PGP A6NDG6.S71.p_PGP A6NDG6_S71s _1_1_71_71 A6NDG6 A6NDG6 Glycerol-3-phosphate phosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21400.21400.3 9.02 9.02 1.113 3 1 1 0 540.2925 1538.8943 S71s TMT10 63 (R) LGFITNNSsK (T) LGFIT(0.0)NNS(0.0)S(0.99)K K:TMT10,s:Phosphorylated S PGP 34461.9 2 1 5598.1 17.79 HUMAN 1 2.1735 -3.6545 GFKALPDSMVSVKRK-p Q14596;S622-p GFKALPDSMVSVKRK 0.387041482456231 0.103516202520673 0.122 -0.192 7.62834102732218 13.0123193904648 0.122 -0.192 0.172649727518364 0.0499767558134892 1.5706131214548 -2.51190730011008 Q14596 NBR1 Q14596.S622.p_NBR1 Q14596_S622s _1_1_622_622 Q14596 Q14596|Q14596-2|B7Z5R6 Next to BRCA1 gene 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20745.20745.2 8.72 5.98 2.476 2 1 1 0 792.9301 1504.8809 S622s TMT10 618 (K) ALPDsMVSVK (R) ALPDS(0.99)MVS(0.0)VK K:TMT10,s:Phosphorylated S NBR1 108552.4 4 5 3628.1 46.61 HUMAN 1 7.6283 -13.0123 GFKELFQTPDHTEES-p P46013;T2085-p GFKELFQTPDHTEES 0.238701747118542 0.00188708706215948 0.226 -0.863 11.9008778062731 42.784025174206 0.226 -0.863 0.0645523741063334 5.26741435026752e-05 2.31476533934143 -11.4573362064948 P46013 MKI67 P46013.T2085.p_MKI67 P46013_T2085t _1_1_2085_2085 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14702.14702.3 18.78 18.78 2.849 5 1 1 0 844.3915 2451.1928 T2085t TMT10 2081 (K) ELFQtPDHTEESTTDDK (T) ELFQT(0.99)PDHT(0.0)EES(0.0)T(0.0)T(0.0)DDK K:TMT10,t:Phosphorylated T MKI67 360912.4 2 69 5.1 1918.46 HUMAN 1 11.9009 -42.784 GFKELFQTPGHTEEA-p P46013;T1355-p GFKELFQTPGHTEEA 0.807190843839437 0.0412038876560022 0.038 -0.464 1.79141486507589 18.5666956104631 0.038 -0.464 0.662000798819968 0.0139101059829993 0.462097329423476 -3.57483195377787 P46013 MKI67 P46013.T1355.p_MKI67 P46013_T1355t _1_1_1355_1355 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17591.17591.3 18.48 18.48 2.365 2 1 1 0 775.064 2243.2072 T1355t TMT10 1351 (K) ELFQtPGHTEEAVAAGK (T) ELFQT(0.99)PGHT(0.0)EEAVAAGK K:TMT10,t:Phosphorylated T MKI67 360912.4 2 42 5.1 1918.46 HUMAN 1 1.7914 -18.5667 GFKELFQTPGHTEEL-p P46013;T1233-p GFKELFQTPGHTEEL 0.400487551853052 0.013701487429064 0.123666666666667 -0.651 7.33264779023829 25.8817475965732 0.123666666666667 -0.651 0.184814150747374 0.00258122130080125 1.51912495057499 -5.26374518856197 P46013 MKI67 P46013.T1233.p_MKI67 P46013_T1233t _1_1_1233_1233 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21094.21094.4 18.04 18.04 1.118 2 1 1 0 592.0604 2285.2542 T1233t TMT10 1229 (K) ELFQtPGHTEELVAAGK (T) ELFQT(0.99)PGHT(0.0)EELVAAGK K:TMT10,t:Phosphorylated T MKI67 360912.4 3 34 5.1 1918.46 HUMAN 1 7.3326 -25.8817 GFKELFQTPGTDKPT-p P46013;T2325-p GFKELFQTPGTDKPT 0.219716131376416 0.0154546550147685 0.312333333333333 -0.785666666666667 12.6687505347113 25.0478598900144 0.312333333333333 -0.785666666666667 0.0540909920353909 0.00312762021155121 2.45154534297536 -5.04959017957546 P46013 MKI67 P46013.T2325.p_MKI67 P46013_T2325t _1_1_2325_2325 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16954.16954.4 17.6 17.6 5.455 4 1 1 0 644.3399 2494.3644 T2325t TMT10 2321 (K) ELFQtPGTDKPTTDEK (T) ELFQT(0.99)PGT(0.0)DKPT(0.0)T(0.0)DEK K:TMT10,t:Phosphorylated T MKI67 360912.4 1 79 5.1 1918.46 HUMAN 1 12.6688 -25.0479 GFKKQDDSPPRPIIG-p Q8IXQ4;S105-p GFKKQDDSPPRPIIG 0.359670995055309 0.0186587735233726 0.125 0.353666666666667 8.25188611488471 23.7952902506527 0.125 0.353666666666667 0.149558599100687 0.00417321706804116 1.67883020613232 4.73944282271425 Q8IXQ4 GPALPP1 Q8IXQ4.S105.p_GPALPP1 Q8IXQ4_S105s_1_1_105_105 Q8IXQ4 Q8IXQ4|A0A0A0MRI1|Q8IXQ4-4 GPALPP motifs-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31698.32098.3 20.01 15.05 99 1 1 1 0 803.0918 2344.3226 Q102q S105s Hydrogen 102 (K) qDDsPPRPIIGPALPPGFIK (S) Q(1.0)DDS(1.0)PPRPIIGPALPPGFIK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S GPALPP1 38141.2 22 1 2555.1 78.73 HUMAN 1 8.2519 23.7953 GFKQRPYSVAVPAFS-p I3L4C2;S525-p GFKQRPYSVAVPAFS 0.747438924126419 0.199271751091149 -0.0756666666666667 0.264666666666667 2.40108621778237 9.21722767020857 -0.0756666666666667 0.264666666666667 0.57529603154077 0.11975047175314 -0.595900989595277 1.84529132325898 I3L4C2 BAIAP2 I3L4C2.S525.p_BAIAP2 I3L4C2_S525s _1_1_525_525 I3L4C2 I3L4C2|Q9UQB8|Q9UQB8-2|Q9UQB8-6|Q9UQB8-4|Q9UQB8-5 Brain-specific angiogenesis inhibitor 1-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22624.22624.3 11.22 11.22 5.678 4 1 1 0 869.4262 2526.2939 S525s TMT10 521 (K) QRPYsVAVPAFSQGLDDYGAR (S) QRPY(0.0)S(0.99)VAVPAFS(0.0)QGLDDY(0.0)GAR s:Phosphorylated S BAIAP2 61608.4 1 17 386.1 333.05 HUMAN 1 -2.4011 9.2172 GFKVKNVSVKDVRRG-p Q5VTE0;S316-p GFKVKNVSVKDVRRG 0.0378666968430127 0.000993050805672115 -0.924666666666667 -1.682 32.366846739015 52.5747531555191 -0.924666666666667 -1.682 0.000579849552189942 5.52744823985245e-06 -7.18583907020043 -17.5379928604617 Q5VTE0 NotFound Q5VTE0.S316.p_NotFound Q5VTE0_S316s _1_1_316_316 Q5VTE0 P68104|Q5VTE0|P68104-2|A0A087WVQ9|A0A087WV01 Putative elongation factor 1-alpha-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8919.8919.3 9.09 3.15 99 1 1 1 0 485.6094 1374.8469 S316s TMT10 314 (K) NVsVKDVR (R) NVS(1.0)VKDVR K:TMT10,s:Phosphorylated S EEF1A1P5 50526.4 1 8 1898.1 108.38 HUMAN 1 -32.3668 -52.5748 GFLARARSPVLWGWS-p A1IGU5;S665-p GFLARARSPVLWGWS 0.662515509657473 0.0838783982064588 0.061 0.191666666666667 3.34755502962436 14.2507153493854 0.061 0.191666666666667 0.462641403750499 0.037577550322216 0.790162290945302 2.73738963188439 A1IGU5 ARHGEF37 A1IGU5.S665.p_ARHGEF37 A1IGU5_S665s _1_1_665_665 A1IGU5 A1IGU5 Rho guanine nucleotide exchange factor 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30838.30838.3 9.95 9.95 4.888 3 1 1 0 588.9727 1684.9372 S665s TMT10 663 (R) ARsPVLWGWSLPS (-) ARS(0.99)PVLWGWS(0.0)LPS(0.0) s:Phosphorylated S ARHGEF37 76676.1 3 3 2088.2 98.03 HUMAN 1 3.3476 14.2507 GFLDVENTPCARHSI-p Q5RI15-2;T39-p GFLDVENTPCARHSI 0.318581896668086 0.910069441915223 0.184333333333333 0.0266666666666667 9.2957194744466 0.572978108195614 0.184333333333333 0.0266666666666666 0.117605613707195 0.876399637351461 1.85956624631041 0.163029140064554 Q5RI15 COX20 Q5RI15.2.T39.p_COX20 Q5RI15-2_T39t _1_1_39_39 Q5RI15-2 Q5RI15-2 Isoform 2 of Cytochrome c oxidase protein 20 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32151.32151.3 17.13 17.13 99 1 1 1 0 638.6526 1833.973 T39t TMT10 30 (K) LLGFLDVENtPCAR (H) LLGFLDVENT(1.0)PCAR C:Carbamidomethylation,t:Phosphorylated T COX20 14953.8 1 1 4267.1 34.46 HUMAN 1 9.2957 0.573 GFLFEGLSDDEDDFH-p Q96S82;S230-p GFLFEGLSDDEDDFH 0.603818036069891 0.223833513329335 0.0703333333333333 0.145666666666667 4.0445469159192 8.56343727006007 0.0703333333333333 0.145666666666667 0.394044534773806 0.139205461034316 0.925635259287953 1.73220020026955 Q96S82 UBL7 Q96S82.S230.p_UBL7 Q96S82_S230s _1_1_230_230 Q96S82 Q96S82 Ubiquitin-like protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29335.29734.3 33.27 33.27 12.579 2 1 1 0 974.0835 2840.2671 S230s TMT10 219 (R) DMPGGFLFEGLsDDEDDFHPNTR (S) DMPGGFLFEGLS(0.99)DDEDDFHPNT(0.0)R s:Phosphorylated S UBL7 40566.8 13 1 4337.1 33.27 HUMAN 1 4.0445 8.5634 GFLGDLASEEDSIEK-p Q92574;S468-p GFLGDLASEEDSIEK 0.152434937700836 0.148427198719736 -0.342333333333333 -0.213333333333333 16.4296414342845 10.907590665925 -0.342333333333333 -0.213333333333333 0.0227528527695692 0.0811411079271901 -3.15112677136064 -2.13897273342751 Q92574 TSC1 Q92574.S468.p_TSC1 Q92574_S468s _1_1_468_468 Q92574 Q92574|Q92574-2 Hamartin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36394.36394.3 21.25 19.35 3.557 5 1 1 0 1006.5065 2937.5345 S468s TMT10 452 (K) GSVTLSDLPGFLGDLAsEEDSIEK (D) GS(0.0)VT(0.0)LS(0.0)DLPGFLGDLAS(0.99)EEDS(0.0)IEK K:TMT10,s:Phosphorylated S TSC1 130734.2 5 4 418.1 320.74 HUMAN 1 -16.4296 -10.9076 GFLSNQGSFEEDDDD-p Q8WV41;S108-p GFLSNQGSFEEDDDD 0.877182701795958 0.0178902822060658 0.027 0.355 1.11781816044947 24.0622548990276 0.027 0.355 0.773068867397258 0.00392441123260114 0.303176253162743 4.80442320056312 Q8WV41 SNX33 Q8WV41.S108.p_SNX33 Q8WV41_S108s _1_1_108_108 Q8WV41 Q8WV41 Sorting nexin-33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27993.27993.3 29.9 29.9 3.472 5 1 1 0 1435.2255 4223.7006 S108s TMT10 96 (R) SGGGSGFLSNQGsFEEDDDDDWDDWDDGCTVVEEPR (A) S(0.0)GGGS(0.0)GFLS(0.0)NQGS(0.99)FEEDDDDDWDDWDDGCT(0.0)VVEEPR C:Carbamidomethylation,s:Phosphorylated S SNX33 65605.7 2 1 2566.1 78.31 HUMAN 1 1.1178 24.0623 GFNLLCPTPPPPPDT-p Q96PE2;T1991-p GFNLLCPTPPPPPDT 0.198300279868763 0.00761202662138416 -0.433 0.590333333333333 13.6922541721918 30.2487342291626 -0.433 0.590333333333333 0.0427341020499355 0.000944336067183244 -2.63658758150838 6.49774798348644 Q96PE2 ARHGEF17 Q96PE2.T1991.p_ARHGEF17 Q96PE2_T1991t _1_1_1991_1991 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36767.36767.5 30.59 30.59 10.604 2 1 1 0 706.1663 3446.8434 T1991t TMT10 1975 (R) FLAAVQLPDGFNLLCPtPPPPPDTGPEK (L) FLAAVQLPDGFNLLCPT(0.99)PPPPPDT(0.0)GPEK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ARHGEF17 223779.6 12 39 30.1 908.19 HUMAN 1 -13.6923 30.2487 GFNSRILSFVYPIRL-p Q6P1M0;S411-p GFNSRILSFVYPIRL 0.857816085563707 0.0734100397529774 -0.0266666666666667 -0.230333333333333 1.29875602272773 15.063347016701 -0.0266666666666667 -0.230333333333333 0.741522609915964 0.0311648684713906 -0.347225919938183 -2.88844581997172 Q6P1M0 SLC27A4 Q6P1M0.S411.p_SLC27A4 Q6P1M0_S411s _1_1_411_411 Q6P1M0 Q6P1M0 Long-chain fatty acid transport protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.33913.33913.2 13.64 11.28 7.354 2 1 1 0 708.8967 1336.819 S411s TMT10 409 (R) ILsFVYPIR (L) ILS(0.99)FVY(0.0)PIR s:Phosphorylated S SLC27A4 72975.8 1 3 4407.1 31.91 HUMAN 1 -1.2988 -15.0633 GFPEDQLSLSDQQIL-p Q9P0U3;S40-p GFPEDQLSLSDQQIL 0.24787473743719 0.860983160822503 0.251 -0.018 11.5738257422243 0.916518176929272 0.251 -0.018 0.069601311926854 0.809744827143358 2.25696312126153 -0.252780149753115 Q9P0U3 SENP1 Q9P0U3.S40.p_SENP1 Q9P0U3_S40s _1_1_40_40 Q9P0U3 Q9P0U3|Q9P0U3-2|F8W0I8 Sentrin-specific protease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26037.26037.4 17.25 17.25 1.263 6 1 1 0 780.6483 3039.5948 S40s TMT10 26 (K) THLLPQTGFPEDQLsLSDQQILSSR (Q) T(0.0)HLLPQT(0.0)GFPEDQLS(0.99)LS(0.0)DQQILS(0.0)S(0.0)R s:Phosphorylated S SENP1 74049.8 2 1 1420.1 144.33 HUMAN 1 11.5738 -0.9165 GFPLPPLSPGGGAVA-p Q92925;S15-p GFPLPPLSPGGGAVA 0.228495456982639 0.0552145170822894 -0.193666666666667 -0.315666666666667 12.322611368162 16.7611513633721 -0.193666666666667 -0.315666666666667 0.0585785831587066 0.0210806920306 -2.3896910443377 -3.21333275811766 Q92925 SMARCD2 Q92925.S15.p_SMARCD2 Q92925_S15s _1_1_15_15 Q92925 Q92925|Q92925-2|J3QS33 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37278.37278.5 27.64 27.64 99 1 1 1 0 744.7996 3640.0035 S15s TMT10 5 (R) GAGGFPLPPLsPGGGAVAAALGAPPPPAGPGMLPGPALR (G) GAGGFPLPPLS(1.0)PGGGAVAAALGAPPPPAGPGMLPGPALR s:Phosphorylated S SMARCD2 59148.1 5 1 1828.1 112.46 HUMAN 1 -12.3226 -16.7612 GFPRRAFSEADMERP-p Q04323;S270-p GFPRRAFSEADMERP 0.387370777933455 0.408215166596152 0.132 0.124666666666667 7.61577911513073 5.17989423932142 0.132 0.124666666666667 0.173149837573285 0.303396506731061 1.56842846361085 1.13668797758798 Q04323 UBXN1 Q04323.S270.p_UBXN1 Q04323_S270s _1_1_270_270 Q04323 Q04323|E9PRQ7|A0A087WTZ5 UBX domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36923.36923.4 12.98 10.51 6.984 2 1 1 0 773.9144 3012.6641 S270s Hydrogen 268 (R) AFsEADMERPLQELGLVPSAVLIVAK (K) AFS(0.99)EADMERPLQELGLVPS(0.0)AVLIVAK K:TMT10-Lys-Only,s:Phosphorylated S UBXN1 33438.8 2 2 2009.1 102.57 HUMAN 1 7.6158 5.1799 GFPTLSRSPPGPAGS-p Q9H9D4;S338-p GFPTLSRSPPGPAGS 0.498541224247654 0.456997943722006 -0.092 0.110666666666667 5.56894783422956 4.53435492122111 -0.092 0.110666666666667 0.277399207864781 0.352017705548694 -1.20737481754123 1.01780027036246 Q9H9D4 ZNF408 Q9H9D4.S338.p_ZNF408 Q9H9D4_S338s _1_1_338_338 Q9H9D4 Q9H9D4 Zinc finger protein 408 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16448.16448.3 11.72 8.7 1.112 7 1 1 0 1058.5326 3093.6369 S338s TMT10 322 (K) TPEPGAQQSGFPTLSRsPPGPAGSSPK (Q) T(0.0)PEPGAQQS(0.0)GFPT(0.0)LS(0.0)RS(0.99)PPGPAGS(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S ZNF408 80206.2 3 3 2225.1 92.82 HUMAN 1 -5.5689 4.5344 GFRAFSGSGNRLDGK-p Q92890-1;S267-p GFRAFSGSGNRLDGK 0.379753282388513 0.0149209176257738 -0.153 -0.384333333333333 7.76638547779502 25.2751226804524 -0.153 -0.384333333333333 0.167248199933423 0.00296816289696612 -1.59460673988702 -5.10732985685454 Q92890 UFD1L Q92890.1.S267.p_UFD1L Q92890-1_S267s _1_1_267_267 Q92890-1 Q92890-1|Q92890-3 Isoform Long of Ubiquitin recognition factor in ER-associated degradation protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9418.9418.4 7.16 7.16 1.15 2 1 1 0 526.7943 2024.1856 S267s TMT10 263 (R) AFSGsGNRLDGKK (K) AFS(0.0)GS(0.99)GNRLDGKK K:TMT10,s:Phosphorylated S UFD1 39066.9 5 4 833.1 215.39 HUMAN 1 -7.7664 -25.2751 GFRPANFSPINASPV-p I3L2J0;S645-p GFRPANFSPINASPV 0.791634956034985 0.241741680312526 -0.0783333333333333 0.123 1.96016004831712 8.12210448555789 -0.0783333333333333 0.123 0.636772053841726 0.154095356333886 -0.499961009495785 1.65580277301896 I3L2J0 NotFound I3L2J0.S645.p_NotFound I3L2J0_S645s _1_1_645_645 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.33844.33844.5 24.33 24.33 1.222 13 1 1 0 991.1023 4871.4994 S645s TMT10 611 (R) SGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFsPINASPVIQR (T) S(0.0)GT(0.0)PS(0.0)FS(0.0)PVS(0.0)T(0.0)QS(0.0)PFS(0.0)PAPS(0.0)PS(0.0)PS(0.0)PLFGFRPANFS(0.99)PINAS(0.0)PVIQR s:Phosphorylated S CIC 259056.7 5 10 23.1 999.57 HUMAN 1 -1.9602 8.1221 GFRSRSSSVGSSSSY-p Q15149;S4386-p GFRSRSSSVGSSSSY 0.407878856431238 0.0535307477923135 -0.113666666666667 -0.278333333333333 7.18537062997153 16.9514801941472 -0.113666666666667 -0.278333333333333 0.191189015558888 0.0201767856654452 -1.49342394536158 -3.25061640563236 Q15149 PLEC Q15149.S4386.p_PLEC Q15149_S4386s _1_1_4386_4386 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13622.14034.2 16.72 16.72 1.154 10 1 1 0 1032.4956 1984.0185 S4386s TMT10 4384 (R) SSsVGSSSSYPISPAVSR (T) S(0.0)S(0.0)S(0.99)VGS(0.0)S(0.0)S(0.0)S(0.0)Y(0.0)PIS(0.0)PAVS(0.0)R s:Phosphorylated S PLEC 533778 13 33 44.1 794.85 HUMAN 1 -7.1854 -16.9515 GFSGGIPSPDKGHRK-p Q9P2Y5;S498-p GFSGGIPSPDKGHRK 0.68906315793135 0.802133511068838 -0.055 -0.032 3.03581986855065 1.34005254404877 -0.055 -0.032 0.497070527043021 0.734504981537402 -0.727678373467462 -0.357091693504844 Q9P2Y5 UVRAG Q9P2Y5.S498.p_UVRAG Q9P2Y5_S498s _1_1_498_498 Q9P2Y5 Q9P2Y5|E9PR71|Q9P2Y5-2 UV radiation resistance-associated gene protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23169.23169.4 22.9 17.78 7.873 4 1 1 0 680.0989 2637.4037 S498s TMT10 480 (K) RQSSIFGGADVGFSGGIPsPDK (G) RQS(0.0)S(0.0)IFGGADVGFS(0.0)GGIPS(0.99)PDK K:TMT10,s:Phosphorylated S UVRAG 78948.1 12 2 797.1 223.6 HUMAN 1 -3.0358 -1.3401 GFSTRRGSPTTGFIE-p Q6ZRV2;S892-p GFSTRRGSPTTGFIE 0.875798989065343 0.0442735058048337 0.0226666666666667 0.248333333333333 1.1293853579889 18.1269731346617 0.0226666666666667 0.248333333333333 0.771012580096151 0.015392270485396 0.306025740502256 3.48512931767672 Q6ZRV2 FAM83H Q6ZRV2.S892.p_FAM83H Q6ZRV2_S892s _1_1_892_892 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11064.11064.3 11.94 6.55 1.418 7 1 1 0 892.4383 2595.3364 S892s Hydrogen 891 (R) GsPTTGFIEQKGSPTSAYPERR (G) GS(0.99)PT(0.0)T(0.0)GFIEQKGS(0.0)PT(0.0)S(0.0)AY(0.0)PERR K:TMT10-Lys-Only,s:Phosphorylated S FAM83H 127633.5 14 20 7.1 1347.23 HUMAN 1 1.1294 18.127 GFSTSPESPYTHWKQ-p Q99873-4;S289-p GFSTSPESPYTHWKQ 0.864453015861562 0.314233067889566 0.05 0.148666666666667 1.23305274045262 6.64404516601905 0.05 0.148666666666667 0.752826201514526 0.216568597176158 0.331357193185145 1.39818294658892 Q99873 PRMT1 Q99873.4.S289.p_PRMT1 Q99873-4_S289s _1_1_289_289 Q99873-4 Q99873|Q99873-4|Q99873-2|Q99873-3|E9PKG1|A0A087X1W2 Isoform 4 of Protein arginine N-methyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18549.18549.3 16.84 16.84 1.98 7 1 1 0 755.0323 2183.1173 S289s TMT10 281 (R) TGFSTSPEsPYTHWK (Q) T(0.0)GFS(0.0)T(0.0)S(0.0)PES(0.99)PY(0.0)T(0.0)HWK K:TMT10,s:Phosphorylated S PRMT1 41175.3 1 3 3375.1 52.54 HUMAN 1 1.2331 6.644 GFSVVADTPELQRIK-p Q14847-2;T104-p GFSVVADTPELQRIK 0.638283004887053 0.0393169648860673 0.081 -0.501666666666667 3.63732606000987 18.8622886745669 0.081 -0.501666666666667 0.432780210688067 0.0129948458634228 0.847136611449597 -3.63576943192778 Q14847 LASP1 Q14847.2.T104.p_LASP1 Q14847-2_T104t _1_1_104_104 Q14847-2 Q14847-2|Q14847-3 Isoform 2 of LIM and SH3 domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18833.18833.3 19.86 18.37 7.792 2 1 1 0 576.6239 1647.8904 T104t TMT10 97 (K) GFSVVADtPELQR (I) GFS(0.0)VVADT(0.99)PELQR t:Phosphorylated T LASP1 36812.2 2 4 1322.1 154.29 HUMAN 1 3.6373 -18.8623 GFSWRGGSDPETTGI-p Q6DD88;S112-p GFSWRGGSDPETTGI 0.911443793699473 0.794937519385579 -0.0193333333333334 -0.0596666666666667 0.789335533305128 1.391660789198 -0.0193333333333334 -0.0596666666666667 0.833808746857644 0.725828339727813 -0.220167333994761 -0.369390368050327 Q6DD88 ATL3 Q6DD88.S112.p_ATL3 Q6DD88_S112s _1_1_112_112 Q6DD88 Q6DD88|F5H6I7 Atlastin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30651.30651.4 14.59 14.59 1.272 5 1 1 0 936.756 3664.0404 S112s TMT10 110 (R) GGsDPETTGIQIWSEVFTVEKPGGKK (V) GGS(0.99)DPET(0.0)T(0.0)GIQIWS(0.0)EVFT(0.0)VEKPGGKK K:TMT10,s:Phosphorylated S ATL3 60997.3 1 4 1880.1 109.36 HUMAN 1 -0.7893 -1.3917 GFTECEMTKSSPLKI-p Q9NQW6;T515-p GFTECEMTKSSPLKI 0.0982272984146251 0.00193275910098377 0.797333333333333 -1.925 21.3449326277664 42.5319850000583 0.797333333333333 -1.925 0.00733680095931475 5.58214996913203e-05 4.17371801861624 -11.3309939913287 Q9NQW6 ANLN Q9NQW6.T515.p_ANLN Q9NQW6_T515t_1_1_515_515 Q9NQW6 Q9NQW6 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13659.13659.4 13.31 13.31 1.203 4 1 1 0 600.3071 2302.239 M514m T515t TMT10 508 (K) GFTECEmtKSSPLK (I) GFT(0.0)ECEM(1.0)T(0.99)KS(0.0)S(0.0)PLK C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,t:Phosphorylated T ANLN 125566 4 34 68.1 675.08 HUMAN 1 21.3449 -42.532 GFTQKVVSLEAELQD-p Q92614;S1518-p GFTQKVVSLEAELQD 0.994672776227923 0.236643522618166 0.00133333333333333 0.127666666666667 0.0469361179025682 8.24397663993278 0.00133333333333333 0.127666666666667 0.989250750025949 0.149831226980431 0.0141061921790009 1.67691094096415 Q92614 MYO18A Q92614.S1518.p_MYO18A Q92614_S1518s _1_1_1518_1518 Q92614 Q92614|Q92614-4|A0A0D9SFK2|Q92614-3|Q92614-2|Q92614-5 Unconventional myosin-XVIIIa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.31239.31239.4 16.71 16.71 8.563 5 1 1 0 836.6949 3263.7825 S1518s TMT10 1516 (K) VVsLEAELQDISSQESKDEASLAK (V) VVS(0.99)LEAELQDIS(0.0)S(0.0)QES(0.0)KDEAS(0.0)LAK K:TMT10,s:Phosphorylated S MYO18A 234309.1 1 7 783.1 225.59 HUMAN 1 0.0469 8.244 GFVEFEDSRDADDAV-p Q13247;S45-p GFVEFEDSRDADDAV 0.731883861351808 0.0137666211706542 -0.0733333333333333 0.540333333333333 2.57016719697384 25.8533104433948 -0.0733333333333333 0.540333333333333 0.553328806462259 0.00259817832656028 -0.631669477606354 5.25633719552222 Q13247 SRSF6 Q13247.S45.p_SRSF6 Q13247_S45s _1_1_45_45 Q13247 Q13247|Q13247-3|Q13247-2 Serine/arginine-rich splicing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25551.25551.3 19.61 15.06 18.579 3 1 1 0 1083.5042 3168.5162 S45s TMT10 35 (K) NGYGFVEFEDsRDADDAVYELNGK (E) NGY(0.0)GFVEFEDS(0.99)RDADDAVY(0.0)ELNGK K:TMT10,s:Phosphorylated S SRSF6 39700.2 1 15 743.1 233.79 HUMAN 1 -2.5702 25.8533 GFVVFDDSEPVQKVL-p Q13283;S388-p GFVVFDDSEPVQKVL 0.839339467553196 0.396943592486056 0.029 0.087 1.47136955407857 5.33469664033898 0.029 0.087 0.712628266309729 0.292772536919155 0.388267225126497 1.16480564797255 Q13283 G3BP1 Q13283.S388.p_G3BP1 Q13283_S388s _1_1_388_388 Q13283 Q13283 Ras GTPase-activating protein-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.31653.31653.4 23.95 23.95 23.954 2 1 1 0 816.1856 3181.7501 S388s TMT10 371 (R) INSGGKLPNFGFVVFDDsEPVQK (V) INS(0.0)GGKLPNFGFVVFDDS(0.99)EPVQK K:TMT10,s:Phosphorylated S G3BP1 52220.4 5 11 1003.1 189.39 HUMAN 1 1.4714 5.3347 GFYCKLCSLFYTNEE-p A8MXP9;S855-p GFYCKLCSLFYTNEE 0.819353128431646 0.640418455705736 0.035 -0.0546666666666667 1.66723315172764 2.63621021925495 0.035 -0.0546666666666667 0.681203208474712 0.544978009166877 0.433778847909826 -0.645417277434384 A8MXP9 NotFound A8MXP9.S855.p_NotFound A8MXP9_S855s _1_1_855_855 A8MXP9 A8MXP9|P43243|P43243-2|B3KM87|Q68E03 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27409.27409.3 17.66 17.66 3.461 3 1 1 0 704.6877 2032.0825 S855s TMT10 853 (K) LCsLFYTNEEVAK (N) LCS(0.99)LFY(0.0)T(0.0)NEEVAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MATR3 100478.9 1 30 92.1 615.57 HUMAN 1 1.6672 -2.6362 GGAADCESPREFRER-p Q8TF30;S181-p GGAADCESPREFRER 0.627993569436905 0.769710479460065 0.075 -0.033 3.75299196368093 1.57108806573362 0.075 -0.033 0.421406086173387 0.696452005677338 0.869609178610381 -0.411528140781578 Q8TF30 WHAMM Q8TF30.S181.p_WHAMM Q8TF30_S181s _1_1_181_181 Q8TF30 Q8TF30 WASP homolog-associated protein with actin, membranes and microtubules HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18332.18332.3 17.99 13.98 99 1 1 1 0 835.376 2424.1451 S181s TMT10 167 (R) DALFPAEGGAADCEsPREFR (E) DALFPAEGGAADCES(1.0)PREFR C:Carbamidomethylation,s:Phosphorylated S WHAMM 91892.7 2 3 3009.1 63.37 HUMAN 1 3.753 -1.5711 GGAARSVSPSPSVLS-p A0A087X1P3;S58-p GGAARSVSPSPSVLS 0.209461411369469 0.0274605623760349 0.265 -0.292333333333333 13.1037203687112 21.1737985561205 0.265 -0.292333333333333 0.0489359431690016 0.00763167986795791 2.52977368593116 -4.13135311446823 A0A087X1P3 NotFound A0A087X1P3.S58.p_NotFound A0A087X1P3_S56sS58s_2_2_56_58 A0A087X1P3 A0A087X1P3|Q86UW7|C9IYE1|Q86UW7-2|Q86UW7-3 Calcium-dependent secretion activator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10937.10937.3 9.96 9.96 9.957 5 2 2 0 696.2986 1926.9516 S56s S58s Hydrogen 56 (R) sVsPSPSVLSEGRDEPQR (Q) S(0.99)VS(0.99)PS(0.0)PS(0.0)VLS(0.0)EGRDEPQR s:Phosphorylated S CADPS2 149549.7 2 3 3576.1 47.91 HUMAN 1 13.1037 -21.1738 GGAASDDSMTDLYPP-p Q15527;S166-p GGAASDDSMTDLYPP 0.305580482046367 0.268525391264189 0.158 0.115333333333333 9.65224708907193 7.51940330401917 0.158 0.115333333333333 0.108336622296731 0.177035217795467 1.92135205391866 1.5511991442441 Q15527 SURF2 Q15527.S166.p_SURF2 Q15527_S163sS166s_2_2_163_166 Q15527 Q15527 Surfeit locus protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33911.34325.4 23.54 17.72 1.574 8 2 2 0 1042.714 4007.8897 S163s S166s TMT10 148 (R) EAFWEPTSSDEGGAAsDDsMTDLYPPELFTRK (D) EAFWEPT(0.0)S(0.0)S(0.0)DEGGAAS(0.99)DDS(0.99)MT(0.0)DLY(0.0)PPELFT(0.0)RK K:TMT10,s:Phosphorylated S SURF2 30103.5 4 8 1281.1 158.83 HUMAN 1 9.6522 7.5194 GGAASKLSKIRVVRK-p P42766;S45-p GGAASKLSKIRVVRK 0.441027182521617 0.160334163439898 -0.155666666666667 -0.179666666666667 6.54947846927958 10.4563329474269 -0.155666666666667 -0.179666666666667 0.221336048921627 0.0900257411099549 -1.38189765645025 -2.06023840675226 P42766 RPL35 P42766.S45.p_RPL35 P42766_S45s _1_1_45_45 P42766 P42766|F2Z388 60S ribosomal protein L35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11283.11283.3 7.83 7.83 1.971 3 1 1 0 596.0199 1706.0779 S45s TMT10 36 (K) VTGGAASKLsK (I) VT(0.0)GGAAS(0.0)KLS(0.99)K K:TMT10,s:Phosphorylated S RPL35 14551.2 1 2 5433.1 19.35 HUMAN 1 -6.5495 -10.4563 GGAASPATEGRGGSE-p Q7Z460-4;T1165-p GGAASPATEGRGGSE 0.155181206854143 0.124471316109268 -0.256666666666667 -0.168333333333333 16.2599532524718 11.9373716134622 -0.256666666666667 -0.168333333333333 0.0236594516442068 0.0640122125540906 -3.11826447921425 -2.32008045513316 Q7Z460 CLASP1 Q7Z460.4.T1165.p_CLASP1 Q7Z460-4_T1165t _1_1_1165_1165 Q7Z460-4 F8WA11|Q7Z460-4|Q7Z460-2 Isoform 4 of CLIP-associating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4575.4575.3 13.04 13.04 1.105 3 1 1 0 742.6722 2146.0322 T1165t TMT10 1157 (R) DGGAASPAtEGRGGSEVEGGR (T) DGGAAS(0.0)PAT(0.99)EGRGGS(0.0)EVEGGR t:Phosphorylated T CLASP1 164028.5 2 52 158.3 498.15 HUMAN 1 -16.26 -11.9374 GGAAVGLSPPAPAPF-p Q9UIU6;S44-p GGAAVGLSPPAPAPF 0.248798577375663 0.350605159921403 0.242666666666667 0.0933333333333333 11.5314432746446 6.03429527665163 0.242666666666667 0.0933333333333334 0.070283870930312 0.249212873255548 2.24949054589363 1.29036210732966 Q9UIU6 SIX4 Q9UIU6.S44.p_SIX4 Q9UIU6_S44s _1_1_44_44 Q9UIU6 Q9UIU6 Homeobox protein SIX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28718.28718.4 14.9 14.9 9.153 2 1 1 0 785.1504 3057.6207 S44s TMT10 34 (R) EVAGGAAVGLsPPAPAPFPLEPGDAATAAAR (V) EVAGGAAVGLS(0.99)PPAPAPFPLEPGDAAT(0.0)AAAR s:Phosphorylated S SIX4 83217.2 3 1 5979.1 14.9 HUMAN 1 11.5314 6.0343 GGAGGEASDPESAAS-p Q9BWC9;S130-p GGAGGEASDPESAAS 0.77295520003432 0.268187135286565 -0.0473333333333333 0.214 2.13744867164927 7.52763741446519 -0.0473333333333333 0.214 0.61130103744392 0.176699881620813 -0.539030369435449 1.55263138736417 Q9BWC9 CCDC106 Q9BWC9.S130.p_CCDC106 Q9BWC9_S130s _1_1_130_130 Q9BWC9 Q9BWC9|K7EMI9 Coiled-coil domain-containing protein 106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12180.12180.3 23.2 23.2 2.624 8 1 1 0 973.7509 2839.2663 S130s TMT10 123 (R) GGAGGEAsDPESAASSLSGASEEGSASER (R) GGAGGEAS(0.99)DPES(0.0)AAS(0.0)S(0.0)LS(0.0)GAS(0.0)EEGS(0.0)AS(0.0)ER s:Phosphorylated S CCDC106 32260.1 2 1 5080.1 23.2 HUMAN 1 -2.1374 7.5276 GGALKASSAPAAAAG-p Q13233;S35-p GGALKASSAPAAAAG 0.603085598910672 0.0536692869280718 0.0773333333333333 -0.252333333333333 4.05668050255021 16.9354625657314 0.0773333333333334 -0.252333333333333 0.392945165349291 0.0202513389894222 0.927948734885879 -3.24747157950755 Q13233 MAP3K1 Q13233.S35.p_MAP3K1 Q13233_S35s _1_1_35_35 Q13233 Q13233 Mitogen-activated protein kinase kinase kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18004.18004.2 10.84 10.84 1.345 2 1 1 0 732.8928 1384.811 S35s TMT10 33 (K) ASsAPAAAAGLLR (E) AS(0.0)S(0.99)APAAAAGLLR s:Phosphorylated S MAP3K1 166521 2 2 505.1 289.91 HUMAN 1 4.0567 -16.9355 GGAQPPDSPAGVRTA-p Q13884;S87-p GGAQPPDSPAGVRTA 0.855951939477099 0.509856746441167 0.0386666666666667 -0.0736666666666666 1.31427095834571 3.92231422556618 0.0386666666666667 -0.0736666666666667 0.738878286636669 0.405292509624734 0.35095270280362 -0.902099864405972 Q13884 SNTB1 Q13884.S87.p_SNTB1 Q13884_S87s _1_1_87_87 Q13884 Q13884|Q13884-2 Beta-1-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5758.5758.3 17.64 17.64 99 1 1 1 0 731.6854 2113.0736 S87s TMT10 71 (R) GAGAGHPGAGGAQPPDsPAGVR (T) GAGAGHPGAGGAQPPDS(1.0)PAGVR s:Phosphorylated S SNTB1 58402.4 2 1 2874.1 67.59 HUMAN 1 1.3143 -3.9223 GGARISLSFTTRSCP-p Q9C075;S46-p GGARISLSFTTRSCP 0.750796816887088 0.601775424473879 0.0496666666666667 0.0583333333333333 2.37134338719733 2.9908118904218 0.0496666666666667 0.0583333333333334 0.579249491590525 0.50224868802609 0.58955401067219 0.718444812617719 Q9C075 KRT23 Q9C075.S46.p_KRT23 Q9C075_S46s _1_1_46_46 Q9C075 Q9C075 Keratin, type I cytoskeletal 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22105.22105.2 8.97 6.95 1.125 4 1 1 0 617.326 1153.6778 S46s TMT10 43 (R) ISLsFTTR (S) IS(0.0)LS(0.99)FT(0.0)T(0.0)R s:Phosphorylated S KRT23 48301.4 1 3 2033.1 101.49 HUMAN 1 2.3713 2.9908 GGASGLASPGC____-p Q05823;S738-p GGASGLASPGC____ 0.344509607851125 0.975227418639537 0.305 -0.0083333333333333 8.59421449949286 0.154179441079508 0.305 -0.00833333333333331 0.138222438369697 0.96512164531392 1.73811909294559 -0.045783670999271 Q05823 RNASEL Q05823.S738.p_RNASEL Q05823_S738s _1_1_738_738 Q05823 Q05823 2-5A-dependent ribonuclease HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9710.9710.4 18.13 18.13 4.904 4 1 1 0 819.1312 3193.5308 S738s TMT10 715 (K) HFPQTHSPNKPQCDGAGGASGLAsPGC (-) HFPQT(0.0)HS(0.0)PNKPQCDGAGGAS(0.0)GLAS(0.99)PGC K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RNASEL 84330 1 2 5554.1 18.24 HUMAN 1 8.5942 -0.1542 GGDDDTMSVISGISS-p Q8N3U4-2;S1058-p GGDDDTMSVISGISS 0.594952417772514 0.532962534188848 0.0786666666666667 0.0586666666666667 4.16004003302997 3.67515185217029 0.0786666666666666 0.0586666666666667 0.383703708515987 0.42902718793187 0.94760041944377 0.854365620654292 Q8N3U4 STAG2 Q8N3U4.2.S1058.p_STAG2 Q8N3U4-2_S1058s _1_1_1058_1058 Q8N3U4-2 Q8N3U4-2 Isoform 2 of Cohesin subunit SA-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26103.26103.3 16.44 16.44 2.359 6 1 1 0 802.0464 2324.1601 S1058s TMT10 1046 (R) NSLLAGGDDDTMsVISGISSR (G) NS(0.0)LLAGGDDDT(0.0)MS(0.99)VIS(0.0)GIS(0.0)S(0.0)R s:Phosphorylated S STAG2 146947.1 4 2 3646.1 46.14 HUMAN 1 4.16 3.6752 GGDDHDDTSDSDSDG-p Q9BTC0;T151-p GGDDHDDTSDSDSDG 0.565856073226583 0.256302373914311 0.0783333333333333 0.116666666666667 4.55529280077195 7.78719295705276 0.0783333333333333 0.116666666666667 0.350324668662 0.166448813722287 1.02189377247659 1.59772892593683 Q9BTC0 DIDO1 Q9BTC0.T151.p_DIDO1 Q9BTC0_T151tS152sS154s_3_3_151_154 Q9BTC0 Q9BTC0|Q9BTC0-1 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17804.17804.3 13.49 13.49 1.25 5 3 3 0 883.3414 2408.1101 T151t S152s S154s TMT10 144 (K) GGDDHDDtsDsDSDGLTLK (E) GGDDHDDT(0.99)S(0.99)DS(0.99)DS(0.0)DGLT(0.0)LK K:TMT10,t:Phosphorylated T,s:Phosphorylated S DIDO1 245579.9 15 33 153.1 505.54 HUMAN 1 4.5553 7.7872 GGDEIPFSPYRVRAV-p P21333-2;S1630-p GGDEIPFSPYRVRAV 0.995010386084919 0.451164144348665 0.00133333333333333 0.0713333333333333 0.0449021542657235 4.60828658283904 0.00133333333333333 0.0713333333333334 0.989714161692822 0.346075887828648 0.0134980143967075 1.03156429883769 P21333 FLNA P21333.2.S1630.p_FLNA P21333-2_S1630s _1_1_1630_1630 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54|A0A087WWY3 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20897.20897.2 14.29 14.29 7.409 3 1 1 0 855.3942 1629.811 S1630s TMT10 1622 (K) YGGDEIPFsPYR (V) Y(0.0)GGDEIPFS(0.99)PY(0.0)R s:Phosphorylated S FLNA 282751.6 3 11 198.1 454.47 HUMAN 1 0.0449 4.6083 GGDMAEPSEAGDAPP-p P08621;S320-p GGDMAEPSEAGDAPP 0.398008175252943 0.0148233079205259 0.171333333333333 0.447 7.38401165136306 25.3226281842337 0.171333333333333 0.447 0.182641234882218 0.00293587243646359 1.5280789988568 5.1194579398759 P08621 SNRNP70 P08621.S320.p_SNRNP70 P08621_S320s _1_1_320_320 P08621 P08621|P08621-2|P08621-4 U1 small nuclear ribonucleoprotein 70 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18013.18221.4 27.99 27.99 99 1 1 1 0 978.6781 3831.718 S320s TMT10 311 (R) GGGGDMAEPsEAGDAPPDDGPPGELGPDGPDGPEEK (G) GGGGDMAEPS(1.0)EAGDAPPDDGPPGELGPDGPDGPEEK K:TMT10,s:Phosphorylated S SNRNP70 51612.9 13 6 607.1 262.24 HUMAN 1 7.384 25.3226 GGDSDHPSDGETSVQ-p Q8WYQ5;S275-p GGDSDHPSDGETSVQ 0.709914515090082 0.424037546319303 0.0526666666666667 0.094 2.79749817768529 4.95988858097606 0.0526666666666667 0.094 0.525109871015367 0.3191619735624 0.67897296936671 1.09648220608081 Q8WYQ5 DGCR8 Q8WYQ5.S275.p_DGCR8 Q8WYQ5_S275s_1_1_275_275 Q8WYQ5 Q8WYQ5|Q8WYQ5-3|Q8WYQ5-2 Microprocessor complex subunit DGCR8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11331.11638.3 16.82 16.82 1.101 6 1 1 0 931.7448 2697.2537 S275s M284m TMT10 267 (K) YGGDSDHPsDGETSVQPmMTK (I) Y(0.0)GGDS(0.0)DHPS(0.99)DGET(0.0)S(0.0)VQPM(0.99)M(0.0)T(0.0)K K:TMT10,s:Phosphorylated S,m:Oxidized methionine DGCR8 86842.3 3 5 1117.1 175.44 HUMAN 1 2.7975 4.9599 GGDSIGETPTPGASK-p O75533;T326-p GGDSIGETPTPGASK 0.645237890381629 0.0583584390606931 0.0786666666666667 0.291333333333333 3.5612029211618 16.4400625361965 0.0786666666666666 0.291333333333333 0.44043285427015 0.0226983216721977 0.832265338561059 3.15084686790248 O75533 SF3B1 O75533.T326.p_SF3B1 O75533_T326t _1_1_326_326 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8052.8052.3 20.31 16.21 2.305 5 1 1 0 762.0465 2204.1559 T326t TMT10 316 (R) TDRGGDSIGEtPTPGASK (R) T(0.0)DRGGDS(0.0)IGET(0.99)PT(0.0)PGAS(0.0)K K:TMT10,t:Phosphorylated T SF3B1 146569.5 8 21 53.1 735.77 HUMAN 1 3.5612 16.4401 GGDSKDLSEVSETTE-p P41227;S213-p GGDSKDLSEVSETTE 0.192065429978728 0.0705887157471207 0.272666666666667 0.241 13.9845757571161 15.3065681338048 0.272666666666667 0.241 0.039952358707709 0.0294674928359765 2.6900870044689 2.93418561712649 P41227 NAA10 P41227.S213.p_NAA10 P41227_S213s _1_1_213_213 P41227 P41227|P41227-2 N-alpha-acetyltransferase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17872.17872.4 11.82 11.82 1.379 13 1 1 0 1108.509 4351.0523 S213s TMT10 199 (K) GLAAEDSGGDSKDLsEVSETTESTDVKDSSEASDSAS (-) GLAAEDS(0.0)GGDS(0.0)KDLS(0.99)EVS(0.0)ET(0.0)T(0.0)ES(0.0)T(0.0)DVKDS(0.0)S(0.0)EAS(0.0)DS(0.0)AS(0.0) K:TMT10,s:Phosphorylated S NAA10 26629.2 1 5 1452.1 140.76 HUMAN 1 13.9846 15.3066 GGEDDRMSVNSGSSS-p Q8WVM7;S1062-p GGEDDRMSVNSGSSS 0.393512730938468 0.0161377331038498 0.115333333333333 0.391 7.47290441753062 24.7456282947811 0.115333333333333 0.391 0.178940875653112 0.00335302792612865 1.54356471955271 4.9735139983056 Q8WVM7 STAG1 Q8WVM7.S1062.p_STAG1 Q8WVM7_S1062s _1_1_1062_1062 Q8WVM7 Q8WVM7|Q8WVM7-2|Q68DW7 Cohesin subunit SA-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11327.11327.3 19.6 19.6 1.113 8 1 1 0 918.1005 2672.3198 S1062s TMT10 1050 (R) NSLVTGGEDDRMsVNSGSSSSK (T) NS(0.0)LVT(0.0)GGEDDRMS(0.99)VNS(0.0)GS(0.0)S(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S STAG1 145394.7 9 2 2727.1 72.59 HUMAN 1 7.4729 24.7456 GGEEDGGSDGMGGDG-p O94992;S252-p GGEEDGGSDGMGGDG 0.924762258201779 0.00544848158522519 -0.031 0.745333333333333 0.669398447316059 32.8436292706175 -0.031 0.745333333333334 0.857156564013246 0.000519561632766898 -0.188762621308914 7.33308316634549 O94992 HEXIM1 O94992.S252.p_HEXIM1 O94992_S252s _1_1_252_252 O94992 O94992 Protein HEXIM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21782.21782.3 20.75 20.75 8.133 5 1 1 0 1251.464 3672.4183 S252s TMT10 233 (K) SDDTSDDDFMEEGGEEDGGsDGMGGDGSEFLQR (D) S(0.0)DDT(0.0)S(0.0)DDDFMEEGGEEDGGS(0.99)DGMGGDGS(0.0)EFLQR s:Phosphorylated S HEXIM1 40908 1 4 1285.2 158.28 HUMAN 1 -0.6694 32.8436 GGEEDIVSPTKELIK-p P98174;S586-p GGEEDIVSPTKELIK 0.595527418368709 0.0141592005983333 0.0913333333333333 -0.438 4.15372553062253 25.6449133437967 0.0913333333333333 -0.438 0.384262007171428 0.00272589212900619 0.946402657241424 -5.20227737803335 P98174 FGD1 P98174.S586.p_FGD1 P98174_S586s _1_1_586_586 P98174 P98174 FYVE, RhoGEF and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.28856.28856.3 15.04 15.04 4.413 3 1 1 0 763.0652 2207.2211 S586s TMT10 574 (K) VYELLGGEEDIVsPTK (E) VY(0.0)ELLGGEEDIVS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S FGD1 107757.1 1 7 1189.1 168.38 HUMAN 1 4.1537 -25.6449 GGEGGEGTEEEDGAE-p Q96LA8;T21-p GGEGGEGTEEEDGAE 0.101218422745456 0.977170053509193 0.513 -0.0053333333333333 21.0305590630747 0.143711063228233 0.513 -0.00533333333333334 0.00788758574956539 0.967450812475913 4.10369350013632 -0.0427239669140098 Q96LA8 PRMT6 Q96LA8.T21.p_PRMT6 Q96LA8_T21t _1_1_21_21 Q96LA8 Q96LA8 Protein arginine N-methyltransferase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9514.9514.5 17 17 16.998 2 1 1 0 722.9451 3530.7359 T21t TMT10 8 (R) KLESGGGGEGGEGtEEEDGAEREAALERPR (R) KLES(0.0)GGGGEGGEGT(0.99)EEEDGAEREAALERPR K:TMT10,t:Phosphorylated T PRMT6 42279.1 2 1 4539.1 30.13 HUMAN 1 21.0306 -0.1437 GGEHVPNSPFQVTAL-p P21333-2;S1726-p GGEHVPNSPFQVTAL 0.379638456722021 0.342622031133287 0.125 -0.102666666666667 7.77016153374214 6.16136214232222 0.125 -0.102666666666667 0.167102846005557 0.2420269822488 1.59526271979922 -1.31293815269009 P21333 FLNA P21333.2.S1726.p_FLNA P21333-2_S1726s _1_1_1726_1726 P21333-2 P21333|P21333-2|Q60FE5|A0A087WWY3 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26065.26065.4 25.08 23.22 3.78 3 1 1 0 814.4103 3174.6534 S1726s TMT10 1718 (R) FGGEHVPNsPFQVTALAGDQPSVQPPLR (S) FGGEHVPNS(0.99)PFQVT(0.0)ALAGDQPS(0.0)VQPPLR s:Phosphorylated S FLNA 282751.6 4 12 198.1 454.47 HUMAN 1 7.7702 -6.1614 GGEKGADSGEEKEEG-p Q9BVG4;S197-p GGEKGADSGEEKEEG 0.229401753870038 0.150416654230421 -0.3 0.212666666666667 12.2893503037105 10.8232574931245 -0.3 0.212666666666667 0.0590289379736089 0.0827321385691506 -2.38376490905513 2.12423351480341 Q9BVG4 PBDC1 Q9BVG4.S197.p_PBDC1 Q9BVG4_S197s _1_1_197_197 Q9BVG4 Q9BVG4 Protein PBDC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7671.7671.5 14.63 9.78 14.634 2 1 1 0 761.5988 3724.001 S197s TMT10 194 (K) GADsGEEKEEGINREDKTDKGGEK (G) GADS(0.99)GEEKEEGINREDKT(0.0)DKGGEK K:TMT10,s:Phosphorylated S PBDC1 26170.4 9 2 2277.1 89.97 HUMAN 1 -12.2894 10.8233 GGEKRADSGEEENTK-p Q9BVG4;S181-p GGEKRADSGEEENTK 0.89100765848779 0.00944705308988025 -0.036 0.415 0.979297511800735 28.5828022010782 -0.036 0.415 0.798123776449358 0.00138586134012351 -0.268677333944185 6.00333226916842 Q9BVG4 PBDC1 Q9BVG4.S181.p_PBDC1 Q9BVG4_S181s _1_1_181_181 Q9BVG4 Q9BVG4 Protein PBDC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4496.4496.4 15.32 15.32 7.556 2 1 1 0 622.8124 2408.2621 S181s TMT10 178 (K) RADsGEEENTKNGGEK (G) RADS(0.99)GEEENT(0.0)KNGGEK K:TMT10,s:Phosphorylated S PBDC1 26170.4 6 1 2277.1 89.97 HUMAN 1 -0.9793 28.5828 GGEKTPVSGSLKSPV-p Q8NI27;S1388-p GGEKTPVSGSLKSPV 0.148266672319898 0.00807787854807093 -0.250666666666667 -0.533333333333333 16.7721229395243 29.811113540308 -0.250666666666667 -0.533333333333333 0.021027503118094 0.001044452385068 -3.21788619397333 -6.36485450862447 Q8NI27 THOC2 Q8NI27.S1388.p_THOC2 Q8NI27_S1388s _1_1_1388_1388 Q8NI27 Q8NI27|A0A0C4DG98|Q8NI27-2 THO complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10520.10520.4 8.87 8.87 1.206 3 1 1 0 482.5279 1847.1205 S1388s TMT10 1381 (K) GGEKTPVsGSLK (S) GGEKT(0.0)PVS(0.99)GS(0.0)LK K:TMT10,s:Phosphorylated S THOC2 184654.1 3 9 512.1 287.1 HUMAN 1 -16.7721 -29.8111 GGENISASPLTSKAV-p A2RRP1;S1384-p GGENISASPLTSKAV 0.489239044905255 0.253343497715256 -0.134 -0.139666666666667 5.7221096813194 7.8546314760589 -0.134 -0.139666666666667 0.267786717571726 0.163884112051519 -1.2348972956683 -1.60943215372971 A2RRP1 NBAS A2RRP1.S1384.p_NBAS A2RRP1_S1384s _1_1_1384_1384 A2RRP1 A2RRP1|A2RRP1-2 Neuroblastoma-amplified sequence HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16926.16926.4 15.82 15.82 1.106 4 1 1 0 701.6141 2723.4517 S1384s TMT10 1369 (R) VNFQIHHEGGENISAsPLTSK (A) VNFQIHHEGGENIS(0.0)AS(0.99)PLT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S NBAS 271875.5 1 3 2447.1 83.13 HUMAN 1 -5.7221 -7.8546 GGESAGRSAESMSDG-p Q9UQC2;S422-p GGESAGRSAESMSDG 0.0404860005836079 0.0145233053233209 -0.572 -0.425 31.1072720660879 25.4666478476712 -0.572 -0.425 0.000774948413301415 0.00284011035474988 -6.77621667743609 -5.15635064169736 Q9UQC2 GAB2 Q9UQC2.S422.p_GAB2 Q9UQC2_S422s _1_1_422_422 Q9UQC2 Q9UQC2|Q9UQC2-2 GRB2-associated-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22706.22706.2 13.61 9.6 1.531 4 1 1 0 939.432 1797.889 S422s Hydrogen 422 (R) sAESMSDGVGSFLPGK (M) S(0.99)AES(0.0)MS(0.0)DGVGS(0.0)FLPGK K:TMT10-Lys-Only,s:Phosphorylated S GAB2 74969.7 3 10 698.1 241.06 HUMAN 1 -31.1073 -25.4666 GGFDSDCSEDGEALN-p O00178;S47-p GGFDSDCSEDGEALN 0.912869099045042 0.00570011283768187 0.018 0.534333333333333 0.772428955322679 32.5034337293853 0.018 0.534333333333334 0.837060993324431 0.000561896888322091 0.215778301451218 7.21875256402509 O00178 GTPBP1 O00178.S47.p_GTPBP1 O00178_S47s _1_1_47_47 O00178 O00178|F8WAZ4 GTP-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22880.22880.3 18.79 18.79 2.904 4 1 1 0 1144.1884 3350.5735 S47s TMT10 38 (R) LHGGFDSDCsEDGEALNGEPELDLTSK (L) LHGGFDS(0.0)DCS(0.99)EDGEALNGEPELDLT(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GTPBP1 73080.2 5 3 2114.1 97.01 HUMAN 1 0.7724 32.5034 GGFGEVESIELPMDN-p Q14103;S210-p GGFGEVESIELPMDN 0.978961407366075 0.00967750202689351 0.00399999999999999 0.510666666666667 0.182363350460282 28.3698427823946 0.00399999999999999 0.510666666666667 0.958878685419027 0.00145551177016077 0.0539922545159487 5.94232267513479 Q14103 HNRNPD Q14103.S210.p_HNRNPD Q14103_S210s _1_1_210_210 Q14103 Q14103|Q14103-2|Q14103-3|Q14103-4 Heterogeneous nuclear ribonucleoprotein D0 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30979.30979.3 14.95 14.95 5.564 2 1 1 0 824.0402 2390.1423 S210s Hydrogen 200 (R) EYFGGFGEVEsIELPMDNK (T) EY(0.0)FGGFGEVES(0.99)IELPMDNK K:TMT10-Lys-Only,s:Phosphorylated S HNRNPD 38604.6 1 6 1392.1 147 HUMAN 1 0.1824 28.3698 GGFPRRHSVTLPSSK-p Q07352;S54-p GGFPRRHSVTLPSSK 0.148266672319898 0.215682985620902 -0.289666666666667 -0.187 16.7495786184582 8.76746136932474 -0.289666666666667 -0.187 0.0211369411462206 0.132817060145345 -3.21347355530723 -1.76749225660491 Q07352 ZFP36L1 Q07352.S54.p_ZFP36L1 Q07352_S54s _1_1_54_54 Q07352 Q07352 mRNA decay activator protein ZFP36L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6713.6713.2 10.46 10.46 2.257 4 1 1 0 825.46 1569.9477 S54s TMT10 52 (R) RHsVTLPSSK (F) RHS(0.99)VT(0.0)LPS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ZFP36L1 36769.3 4 8 1672.2 122.01 HUMAN 1 -16.7496 -8.7675 GGFSRSATPTPTVIA-p Q92618;T930-p GGFSRSATPTPTVIA 0.214718677142886 0.0900827548375025 0.203 0.184666666666667 12.8781955350723 13.8343978529711 0.203 0.184666666666667 0.0515442763164659 0.0413580653113874 2.48914140416017 2.66099029399801 Q92618 ZNF516 Q92618.T930.p_ZNF516 Q92618_T930t _1_1_930_930 Q92618 Q92618 Zinc finger protein 516 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11267.11267.2 8.28 6.04 1.535 4 1 1 0 711.8822 1342.7892 T930t TMT10 928 (R) SAtPTPTVIAR (A) S(0.0)AT(0.99)PT(0.0)PT(0.0)VIAR t:Phosphorylated T ZNF516 126397.9 3 5 3011.1 63.33 HUMAN 1 12.8782 13.8344 GGFVAWNSLGQPHVN-p Q8N3J5;S248-p GGFVAWNSLGQPHVN 0.38743012975612 0.00226437279650065 0.134 0.789333333333333 7.61470947582146 40.9313381448885 0.134 0.789333333333334 0.173192488514064 8.06986343913454e-05 1.56824243110174 10.5583027980944 Q8N3J5 PPM1K Q8N3J5.S248.p_PPM1K Q8N3J5_S248s _1_1_248_248 Q8N3J5 Q8N3J5|A0A0A0MQZ4|V9GY69 Protein phosphatase 1K, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17026.17026.3 22.11 21.57 99 1 1 1 0 874.7783 2542.3502 S248s TMT10 239 (K) KCGGFVAWNsLGQPHVNGR (L) KCGGFVAWNS(1.0)LGQPHVNGR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PPM1K 41510.2 11 1 3777.1 43.32 HUMAN 1 7.6147 40.9313 GGGEAAQSPGPLPQS-p A1L390;S1115-p GGGEAAQSPGPLPQS 0.799321908925685 0.00459356165517998 -0.05 -0.573333333333333 1.87392304356632 34.2235986026622 -0.05 -0.573333333333333 0.649542684151112 0.000378129133711182 -0.480696760947107 -7.8127218215256 A1L390 PLEKHG3 A1L390.S1115.p_PLEKHG3 A1L390_S1115s _1_1_1115_1115 A1L390 A1L390|A1L390-3|A1L390-2 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22135.22135.5 20.62 14.83 8.205 6 1 1 0 847.8289 4155.1359 S1115s TMT10 1108 (R) GGGEAAQsPGPLPQSKPDGGETLYVTADLTLEDNRR (V) GGGEAAQS(0.99)PGPLPQS(0.0)KPDGGET(0.0)LY(0.0)VT(0.0)ADLT(0.0)LEDNRR K:TMT10,s:Phosphorylated S PLEKHG3 135322.7 2 24 284.1 386.18 HUMAN 1 -1.8739 -34.2236 GGGEATGSPLAQGKD-p Q6WCQ1-2;S891-p GGGEATGSPLAQGKD 0.925978143058403 0.895659664728317 0.0166666666666667 0.013 0.659427458288713 0.671670678597985 0.0166666666666667 0.013 0.859126774957274 0.856708216493222 0.186123024622804 0.189345582269661 Q6WCQ1 MPRIP Q6WCQ1.2.S891.p_MPRIP Q6WCQ1-2_S891s _1_1_891_891 Q6WCQ1-2 Q6WCQ1-2|Q6WCQ1-3 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19055.19055.3 21.09 21.09 1.121 4 1 1 0 790.0766 2288.2498 S891s TMT10 878 (R) TLLTGDGGGEATGsPLAQGK (D) T(0.0)LLT(0.0)GDGGGEAT(0.0)GS(0.99)PLAQGK K:TMT10,s:Phosphorylated S MPRIP 118899.7 4 15 204.1 449.03 HUMAN 1 0.6594 0.6717 GGGEFYGYMTMDRPL-p Q9Y4H2;Y542-p GGGEFYGYMTMDRPL 0.0320113506588935 0.0180341739316754 1.60833333333333 0.946 34.9527467484074 24.0163489980407 1.60833333333333 0.946 0.000319687256913051 0.00396611315072721 8.0924945553578 4.79320704608373 Q9Y4H2 IRS2 Q9Y4H2.Y542.p_IRS2 Q9Y4H2_Y542y _1_1_542_542 Q9Y4H2 Q9Y4H2 Insulin receptor substrate 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.18751.18795.4 26.6 22.07 1.459 4 1 1 0 708.0531 2749.2119 Y542y TMT10 532 (R) DGGGGGEFYGyMTMDRPLSHCGR (S) DGGGGGEFY(0.0)GY(0.99)MT(0.0)MDRPLS(0.0)HCGR C:Carbamidomethylation,y:Phosphorylated Y IRS2 138529.8 3 1 35.1 55.49 HUMAN 1 34.9527 24.0163 GGGERFDSLTDLVEH-p Q06124;S189-p GGGERFDSLTDLVEH 0.569737548726187 0.0511642402924895 -0.115333333333333 0.245 4.49605274902319 17.2374331728381 -0.115333333333333 0.245 0.355136021506018 0.0188910754561247 -1.01084007417171 3.30698255869259 Q06124 PTPN11 Q06124.S189.p_PTPN11 Q06124_S189s _1_1_189_189 Q06124 Q06124|Q06124-2|Q06124-3|A0A1W2PPU4 Tyrosine-protein phosphatase non-receptor type 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24834.24834.4 18.15 18.15 1.183 4 1 1 0 799.6654 3115.6667 S189s TMT10 179 (K) YDVGGGERFDsLTDLVEHYKK (N) Y(0.0)DVGGGERFDS(0.99)LT(0.0)DLVEHY(0.0)KK K:TMT10,s:Phosphorylated S PTPN11 69005.6 4 2 1999.1 103.37 HUMAN 1 -4.4961 17.2374 GGGFGGGSLSGGGGS-p P19012;S34-p GGGFGGGSLSGGGGS 0.489972447242158 0.235665416510418 0.095 0.119 5.71164405656092 8.26600575179469 0.095 0.119 0.268432807939009 0.149073148754081 1.23302018297556 1.68072526643366 P19012 KRT15 P19012.S34.p_KRT15 P19012_S34s _1_1_34_34 P19012 P19012 Keratin, type I cytoskeletal 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19476.19476.3 21.6 21.6 2.926 4 1 1 0 711.0094 2051.0467 S34s TMT10 20 (R) GGSLLAGGGGFGGGsLSGGGGSR (S) GGS(0.0)LLAGGGGFGGGS(0.99)LS(0.0)GGGGS(0.0)R s:Phosphorylated S KRT15 49439.1 1 28 383.2 334.07 HUMAN 1 5.7116 8.266 GGGGAARSVSPSPSV-p A0A087X1P3;S56-p GGGGAARSVSPSPSV 0.209461411369469 0.0274605623760349 0.265 -0.292333333333333 13.1037203687112 21.1737985561205 0.265 -0.292333333333333 0.0489359431690016 0.00763167986795791 2.52977368593116 -4.13135311446823 A0A087X1P3 NotFound A0A087X1P3.S56.p_NotFound A0A087X1P3_S56sS58s_2_2_56_58 A0A087X1P3 A0A087X1P3|Q86UW7|C9IYE1|Q86UW7-2|Q86UW7-3 Calcium-dependent secretion activator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10937.10937.3 9.96 9.96 9.957 5 2 2 0 696.2986 1926.9516 S56s S58s Hydrogen 56 (R) sVsPSPSVLSEGRDEPQR (Q) S(0.99)VS(0.99)PS(0.0)PS(0.0)VLS(0.0)EGRDEPQR s:Phosphorylated S CADPS2 149549.7 2 3 3576.1 47.91 HUMAN 1 13.1037 -21.1738 GGGGGDKSPPGSAAS-p P14651;S181-p GGGGGDKSPPGSAAS 0.100537149966204 0.0296407360359575 0.515666666666667 -0.386333333333333 21.105879263474 20.6830152597811 0.515666666666667 -0.386333333333333 0.00775196982720436 0.00854473255320978 4.12040658440021 -4.02316050072873 P14651 HOXB3 P14651.S181.p_HOXB3 P14651_S181s _1_1_181_181 P14651 P14651|P14651-2|P14651-3 Homeobox protein Hox-B3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5054.5054.5 31.81 31.81 2 7 1 1 0 889.0074 4361.0513 S181s TMT10 144 (K) NNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKsPPGSAASKR (A) NNS(0.0)PGT(0.0)AEGCGGGGGGGGGGGS(0.0)GGS(0.0)GGGGGGGGGGDKS(0.99)PPGS(0.0)AAS(0.0)KR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HOXB3 44738.8 1 1 4172.1 36.24 HUMAN 1 21.1059 -20.683 GGGGGGGSGGGGGSG-p Q9UHB9;S16-p GGGGGGGSGGGGGSG 0.421053324853859 0.439419212336514 0.121666666666667 0.0773333333333334 6.92046400339032 4.75666696230608 0.121666666666667 0.0773333333333334 0.203213988403086 0.334451619893567 1.44708355004415 1.0590660309067 Q9UHB9 SRP68 Q9UHB9.S16.p_SRP68 Q9UHB9_S16s _1_1_16_16 Q9UHB9 Q9UHB9|Q9UHB9-2|Q9UHB9-4|K7EQC2|K7EN53 Signal recognition particle subunit SRP68 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4388.4388.2 15.09 12.01 1.107 3 1 1 0 1076.9699 2072.9655 S16s TMT10 6 (K) QVPGGGGGGGsGGGGGSGGGGSGGGR (G) QVPGGGGGGGS(0.99)GGGGGS(0.0)GGGGS(0.0)GGGR s:Phosphorylated S SRP68 71241.8 4 1 2177.1 94.49 HUMAN 1 6.9205 4.7567 GGGGGGGSGGRRFSN-p A0A087X165;S39-p GGGGGGGSGGRRFSN 0.207422631751664 0.450214954354378 0.315 -0.0806666666666667 13.1902895282066 4.62026155111321 0.315 -0.0806666666666667 0.0479701467632775 0.345122953897692 2.54541329145692 -1.03378981026863 A0A087X165 NotFound A0A087X165.S39.p_NotFound A0A087X165_S39s _1_1_39_39 A0A087X165 A0A087X165|Q9C0H9-5 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3597.3597.3 8.39 8.39 8.387 2 1 1 0 485.5749 1374.7399 S39s TMT10 30 (R) TLGGGGGGGsGGRR (F) T(0.0)LGGGGGGGS(0.99)GGRR s:Phosphorylated S SRCIN1 130745.5 1 1 98.1 603.22 HUMAN 1 13.1903 -4.6203 GGGGGGGSVPGIERM-p P52272;S397-p GGGGGGGSVPGIERM 0.148266672319898 0.0608029434396757 0.289 0.221666666666667 16.8024421464074 16.2009438929492 0.289 0.221666666666667 0.0208812159769114 0.0239831161480397 3.22382469551229 3.10464133687592 P52272 HNRNPM P52272.S397.p_HNRNPM P52272_S397s _1_1_397_397 P52272 P52272|A0A087X0X3|P52272-2 Heterogeneous nuclear ribonucleoprotein M HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8537.8537.2 7.92 7.92 99 1 1 1 0 797.3829 1513.792 S397s TMT10 389 (K) QGGGGGGGsVPGIER (M) QGGGGGGGS(1.0)VPGIER s:Phosphorylated S HNRNPM 77799.7 2 5 830.1 216.57 HUMAN 1 16.8024 16.2009 GGGGGGPSPCGPGGG-p Q9H6S0;S23-p GGGGGGPSPCGPGGG 0.253185624491412 0.48477958838073 0.29 0.104333333333333 11.3733447432988 4.19903057383402 0.29 0.104333333333333 0.0728895930743293 0.38027427114688 2.22165025993423 0.954820682278432 Q9H6S0 YTHDC2 Q9H6S0.S23.p_YTHDC2 Q9H6S0_S23s _1_1_23_23 Q9H6S0 Q9H6S0|D6RA70|D6RF50 Probable ATP-dependent RNA helicase YTHDC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5711.5711.3 15.73 15.73 99 1 1 1 0 700.6472 2019.9616 S23s TMT10 11 (R) QPAPGGGGGGGPsPCGPGGGGR (A) QPAPGGGGGGGPS(1.0)PCGPGGGGR C:Carbamidomethylation,s:Phosphorylated S YTHDC2 161671.9 1 2 668.1 249.65 HUMAN 1 11.3733 4.199 GGGGLRESRRGKQGA-p Q9NR82-2;S78-p GGGGLRESRRGKQGA 0.883243043127677 0.00320981770772267 -0.0506666666666667 -0.858 1.06472835833466 37.3829716220459 -0.0506666666666667 -0.858 0.782577152018876 0.000182684978239087 -0.290036963523236 -9.01431468161418 Q9NR82 KCNQ5 Q9NR82.2.S78.p_KCNQ5 Q9NR82-2_S78s _1_1_78_78 Q9NR82-2 Q9NR82|F8WEA4|Q9NR82-2|A0A0A0MSC0|Q9NR82-5|A0A0A0MT07|Q9NR82-4 Isoform 2 of Potassium voltage-gated channel subfamily KQT member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7166.7166.3 10.43 10.43 10.427 2 1 1 0 556.6194 1587.8764 S78s TMT10 65 (R) AATLGGGGGGLREsR (R) AAT(0.0)LGGGGGGLRES(0.99)R s:Phosphorylated S KCNQ5 102286.2 1 1 2456.1 82.72 HUMAN 1 -1.0647 -37.383 GGGGMEKSSGPWNKT-p Q9UKY7;S137-p GGGGMEKSSGPWNKT 0.505126453038306 0.70058514049814 -0.111666666666667 -0.0416666666666667 5.47760818577673 2.12497461075515 -0.111666666666667 -0.0416666666666667 0.283295177357865 0.613059376139432 -1.19090703896033 -0.536240353287244 Q9UKY7 CDV3 Q9UKY7.S137.p_CDV3 Q9UKY7_S137s _1_1_137_137 Q9UKY7 Q9UKY7|Q9UKY7-2 Protein CDV3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12578.12578.2 11.32 11.32 1.108 2 1 1 0 657.3358 1233.6992 S137s TMT10 137 (K) sSGPWNK (T) S(0.99)S(0.0)GPWNK K:TMT10,s:Phosphorylated S CDV3 27334.4 2 7 802.1 222.73 HUMAN 1 -5.4776 -2.125 GGGGNEGSPCPPCPG-p P78411;S357-p GGGGNEGSPCPPCPG 0.198471042220842 0.687193374128327 0.298 0.0406666666666667 13.6734004821373 2.2303843107413 0.298 0.0406666666666667 0.0429200235694789 0.598358643471432 2.63314752198557 0.559170941717367 P78411 IRX5 P78411.S357.p_IRX5 P78411_S357s_1_1_357_357 P78411 P78411|P78411-2|P78411-3 Iroquois-class homeodomain protein IRX-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15673.15673.3 16.53 12.67 14.319 2 1 1 0 1096.858 3207.6039 N354n S357s TMT10 347 (K) VKDGGGGnEGsPCPPCPGPIAGQALGGSR (A) VKDGGGGN(1.0)EGS(0.99)PCPPCPGPIAGQALGGS(0.0)R K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S IRX5 50702.2 2 5 1529.1 133.88 HUMAN 1 13.6734 2.2304 GGGGSRSSPGSVAAS-p Q9BXB5;S57-p GGGGSRSSPGSVAAS 0.926497336896756 0.035438870739653 0.0146666666666667 -0.324333333333333 0.654656365057297 19.5238377669839 0.0146666666666666 -0.324333333333333 0.860071117211623 0.0111587673567971 0.184858381293548 -3.77407308283691 Q9BXB5 OSBPL10 Q9BXB5.S57.p_OSBPL10 Q9BXB5_S57s _1_1_57_57 Q9BXB5 Q9BXB5|Q9BXB5-2 Oxysterol-binding protein-related protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7369.7369.3 15.44 9.68 1.382 7 1 1 0 861.0824 2501.2654 S57s TMT10 44 (R) SAAAGLGGGGSRSsPGSVAASPSGGGGR (R) S(0.0)AAAGLGGGGS(0.0)RS(0.0)S(0.99)PGS(0.0)VAAS(0.0)PS(0.0)GGGGR s:Phosphorylated S OSBPL10 84767.3 2 3 1766.1 116.53 HUMAN 1 0.6547 -19.5238 GGGGYGGSGDGYNGF-p P09651-2;S240-p GGGGYGGSGDGYNGF 0.306187730404987 0.31446573620408 0.142 -0.126333333333333 9.63293409852146 6.64023363383991 0.142 -0.126333333333333 0.108819465936626 0.216758749375678 1.91800300645676 -1.39751266256575 P09651 HNRNPA1 P09651.2.S240.p_HNRNPA1 P09651-2_S240s _1_1_240_240 P09651-2 P09651-2 Isoform A1-A of Heterogeneous nuclear ribonucleoprotein A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25363.25363.4 20.78 20.78 2.13 9 1 1 0 1236.7668 4864.0667 S240s TMT10 233 (R) GGGGYGGsGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMK (G) GGGGY(0.0)GGS(0.99)GDGY(0.0)NGFGNDGS(0.0)NFGGGGS(0.0)Y(0.0)NDFGNY(0.0)NNQS(0.0)S(0.0)NFGPMK K:TMT10,s:Phosphorylated S HNRNPA1 34309.7 6 8 504.1 289.99 HUMAN 1 9.6329 -6.6402 GGGKRRNSCNVGGGG-p Q7L2J0;S152-p GGGKRRNSCNVGGGG 0.22069724931623 0.00472277611830627 -0.258 -0.647 12.635722717138 34.018324407295 -0.258 -0.647 0.0545039187205319 0.000396430955538047 -2.44562860438058 -7.73972384113035 Q7L2J0 MEPCE Q7L2J0.S152.p_MEPCE Q7L2J0_S152s _1_1_152_152 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7630.7630.3 14.02 10.24 99 1 1 1 0 635.6454 1824.9539 S152s TMT10 150 (R) RNsCNVGGGGGGFK (H) RNS(1.0)CNVGGGGGGFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MEPCE 74981.5 6 4 428.1 317.7 HUMAN 1 -12.6357 -34.0183 GGGLGAGSPALSGGQ-p Q6IQ22;S21-p GGGLGAGSPALSGGQ 0.2040437776167 0.146320349782132 0.205666666666667 -0.156666666666667 13.3668443204046 10.9945453730041 0.205666666666667 -0.156666666666667 0.0460591127702422 0.0795326517335065 2.5773852270349 -2.15418313612428 Q6IQ22 RAB12 Q6IQ22.S21.p_RAB12 Q6IQ22_S21s _1_1_21_21 Q6IQ22 Q6IQ22 Ras-related protein Rab-12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6739.6739.3 20.07 20.07 5.866 2 1 1 0 683.6777 1969.0525 S21s TMT10 10 (R) RAGGGGGLGAGsPALSGGQGR (R) RAGGGGGLGAGS(0.99)PALS(0.0)GGQGR s:Phosphorylated S RAB12 27590.2 5 1 2925.1 65.79 HUMAN 1 13.3668 -10.9945 GGGNFGGSPGYGGGR-p P22626;S259-p GGGNFGGSPGYGGGR 0.638709569930129 0.618028835500003 0.071 -0.0493333333333333 3.63218963435829 2.83988766677808 0.071 -0.0493333333333333 0.433292365120294 0.520009446757628 0.84613523625677 -0.687606135131603 P22626 HNRNPA2B1 P22626.S259.p_HNRNPA2B1 P22626_S259s _1_1_259_259 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17588.18209.3 28.35 28.35 6.718 4 1 1 0 935.3971 2724.2025 S259s TMT10 239 (R) GFGDGYNGYGGGPGGGNFGGsPGYGGGR (G) GFGDGY(0.0)NGY(0.0)GGGPGGGNFGGS(0.99)PGY(0.0)GGGR s:Phosphorylated S HNRNPA2B1 37486.1 46 13 299.1 378.08 HUMAN 1 3.6322 -2.8399 GGGNPGASCKDTSGE-p Q9HD26;S407-p GGGNPGASCKDTSGE 0.986035259208304 0.00929166830878165 0.00533333333333331 -0.464 0.124057454128642 28.6882219418368 0.00533333333333334 -0.464 0.971838846105522 0.00135262623264048 0.0369642731700799 -6.033712572823 Q9HD26 GOPC Q9HD26.S407.p_GOPC Q9HD26_S407s _1_1_407_407 Q9HD26 Q9HD26|Q9HD26-2|F5H1Y4 Golgi-associated PDZ and coiled-coil motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23395.23395.4 19.07 16.18 1.155 4 1 1 0 820.1621 3197.6603 S407s TMT10 393 (R) LYLDELEGGGNPGAsCKDTSGEIK (V) LY(0.0)LDELEGGGNPGAS(0.99)CKDT(0.0)S(0.0)GEIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GOPC 50918.4 2 3 3710.1 44.75 HUMAN 1 0.1241 -28.6882 GGGNRRGSPSAAFTF-p Q9ULT0-4;S51-p GGGNRRGSPSAAFTF 0.450887232351077 0.229755606665567 0.113666666666667 0.119666666666667 6.38727722540279 8.41471616157787 0.113666666666667 0.119666666666667 0.229758865153599 0.144055015607118 1.35327275947971 1.70646695900579 Q9ULT0 TTC7A Q9ULT0.4.S51.p_TTC7A Q9ULT0-4_S51s _1_1_51_51 Q9ULT0-4 Q9ULT0-4|Q9ULT0-3 Isoform 3 of Tetratricopeptide repeat protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21757.21757.3 17.21 17.21 1.122 4 1 1 0 742.3428 2145.045 S51s Hydrogen 49 (R) RGsPSAAFTFPDTDDFGK (L) RGS(0.99)PS(0.0)AAFT(0.0)FPDT(0.0)DDFGK K:TMT10-Lys-Only,s:Phosphorylated S TTC7A 99850 7 1 1883.1 109.27 HUMAN 1 6.3873 8.4147 GGGPGGGSAGGPSQP-p A0A087WTP3;S54-p GGGPGGGSAGGPSQP 0.464943727936046 0.472377030468368 0.112666666666667 0.164 6.13777931451707 4.34210685362479 0.112666666666667 0.164 0.243344799017126 0.367950429867096 1.30907089089793 0.981807489463486 A0A087WTP3 NotFound A0A087WTP3.S54.p_NotFound A0A087WTP3_S54s _1_1_54_54 A0A087WTP3 Q92945|A0A087WTP3 Far upstream element-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9730.9730.3 14.53 11.66 2.197 2 1 1 0 979.4892 2856.4865 S54s TMT10 41 (R) GGGGPGGGGPGGGsAGGPSQPPGGGGPGIRK (D) GGGGPGGGGPGGGS(0.99)AGGPS(0.0)QPPGGGGPGIRK K:TMT10,s:Phosphorylated S KHSRP 73482.9 2 1 970.1 193.49 HUMAN 1 6.1378 4.3421 GGGPRPPSPRDGYGS-p Q8TAP9;S40-p GGGPRPPSPRDGYGS 0.158734869392744 0.00672913782096805 0.246666666666667 0.494666666666667 16.0113473363308 31.1889629911443 0.246666666666667 0.494666666666667 0.0250533188917559 0.000760507849411777 3.07036939408001 6.79085505814027 Q8TAP9 MPLKIP Q8TAP9.S40.p_MPLKIP Q8TAP9_S40s _1_1_40_40 Q8TAP9 Q8TAP9 M-phase-specific PLK1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4879.4879.3 13.09 8.35 7.873 2 1 1 0 533.605 1518.8338 S40s TMT10 29 (R) GTPGGGGPRPPsPR (D) GT(0.0)PGGGGPRPPS(0.99)PR s:Phosphorylated S MPLKIP 19203.6 5 2 1651.1 123.4 HUMAN 1 16.0113 31.189 GGGQRSLSPGGAALG-p Q96T37;S294-p GGGQRSLSPGGAALG 0.879599635286023 0.299405916334324 -0.023 0.131666666666667 1.0965717579357 6.91435948307453 -0.023 0.131666666666667 0.776860113970782 0.203499830437063 -0.297930044126917 1.44561930691412 Q96T37 RBM15 Q96T37.S294.p_RBM15 Q96T37_S294s _1_1_294_294 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15521.15521.3 18.33 18.33 2.229 3 1 1 0 486.5826 1377.7688 S294s TMT10 292 (R) SLsPGGAALGYR (D) S(0.0)LS(0.99)PGGAALGY(0.0)R s:Phosphorylated S RBM15 107414.9 15 11 55.1 724.11 HUMAN 1 -1.0966 6.9144 GGGRGLLSPPMGQSG-p Q86UU0;S750-p GGGRGLLSPPMGQSG 0.889344413598258 0.836799538673673 0.0203333333333333 0.021 0.994241127588865 1.086813135016 0.0203333333333333 0.021 0.795382235962075 0.778607685948894 0.272433250453596 0.295485576811368 Q86UU0 BCL9L Q86UU0.S750.p_BCL9L Q86UU0_S750s _1_1_750_750 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22107.22107.2 13.02 8.66 2.756 2 1 1 0 811.4192 1541.8671 S750s TMT10 747 (R) GLLsPPMGQSGLR (E) GLLS(0.99)PPMGQS(0.0)GLR s:Phosphorylated S BCL9L 157526.3 2 10 139.1 524.37 HUMAN 1 0.9942 1.0868 GGGRPEGSPKAAGYA-p Q16584;S35-p GGGRPEGSPKAAGYA 0.390292145863872 0.82568328769177 -0.12 0.026 7.55295449618977 1.16338516794226 -0.12 0.026 0.175672810893205 0.765000084642801 -1.55749917849545 0.314342569906691 Q16584 MAP3K11 Q16584.S35.p_MAP3K11 Q16584_S35s_1_1_35_35 Q16584 Q16584 Mitogen-activated protein kinase kinase kinase 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14058.14058.4 17.82 17.82 2.36 5 1 1 0 713.8407 2771.3861 N17n S35s TMT10 11 (K) SPLGSWnGSGSGGGGGGGGGRPEGsPK (A) S(0.0)PLGS(0.0)WN(1.0)GS(0.0)GS(0.0)GGGGGGGGGRPEGS(0.99)PK K:TMT10,n:Deamidated,s:Phosphorylated S MAP3K11 93313.9 3 2 536.1 278.53 HUMAN 1 -7.553 1.1634 GGGRRRDSYYDRGYD-p Q13595;S236-p GGGRRRDSYYDRGYD 0.613153685092707 0.765596601478315 0.0676666666666667 0.0416666666666667 3.93986642043062 1.60255953539601 0.0676666666666667 0.0416666666666667 0.403657808415934 0.691423357138495 0.905617451067052 0.41882389360756 Q13595 TRA2A Q13595.S236.p_TRA2A Q13595_S236s _1_1_236_236 Q13595 Q13595|Q13595-3|Q13595-4 Transformer-2 protein homolog alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3766.3766.3 9.65 6.66 2.955 4 1 1 0 515.8766 1465.6455 S236s Hydrogen 234 (R) RDsYYDRGYDR (G) RDS(0.99)Y(0.0)Y(0.0)DRGY(0.0)DR s:Phosphorylated S TRA2A 32745.1 3 117 8.2 1346.57 HUMAN 1 3.9399 1.6026 GGGRVQNSPPVGRKT-p O95359;S2226-p GGGRVQNSPPVGRKT 0.838434700075781 0.362500537539924 0.035 -0.100333333333333 1.48056623357517 5.84612767336166 0.035 -0.100333333333333 0.711120791609742 0.260247899334189 0.390428596342319 -1.25681175447354 O95359 TACC2 O95359.S2226.p_TACC2 O95359_S2226s _1_1_2226_2226 O95359 O95359|E9PBC6|O95359-3|E7EMZ9|O95359-5|Q4VXL8|O95359-1|D6RAA5 Transforming acidic coiled-coil-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6668.6668.2 10.8 5.57 99 1 1 1 0 631.827 1182.6792 S2226s TMT10 2223 (R) VQNsPPVGR (K) VQNS(1.0)PPVGR s:Phosphorylated S TACC2 311818.1 10 15 101.1 597.93 HUMAN 1 1.4806 -5.8461 GGGSPEKSPSAQELK-p Q9UNE7;S23-p GGGSPEKSPSAQELK 0.696949484695718 0.664570602550755 -0.0693333333333333 0.0466666666666667 2.94543560837153 2.4293814612151 -0.0693333333333334 0.0466666666666667 0.507523830549414 0.571560034637892 -0.709307698430082 0.601847737092467 Q9UNE7 STUB1 Q9UNE7.S23.p_STUB1 Q9UNE7_S19sS23s_2_2_19_23 Q9UNE7 Q9UNE7 E3 ubiquitin-protein ligase CHIP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16002.16002.2 10.07 10.07 1.115 3 2 2 0 1280.6555 2400.3702 S19s S23s TMT10 13 (R) LGAGGGsPEKsPSAQELK (E) LGAGGGS(0.99)PEKS(0.99)PS(0.0)AQELK K:TMT10,s:Phosphorylated S STUB1 35312 9 4 2394.1 85.43 HUMAN 1 -2.9454 2.4294 GGGSRDLSPEPAPDE-p Q8TBE0;S184-p GGGSRDLSPEPAPDE 0.208094276358716 0.0466168924764706 -0.190666666666667 -0.285 13.1504941187363 17.8114153094543 -0.190666666666667 -0.285 0.0484117283985476 0.016552304574025 -2.53822085627228 -3.42143535982267 Q8TBE0 BAHD1 Q8TBE0.S184.p_BAHD1 Q8TBE0_S184s _1_1_184_184 Q8TBE0 Q8TBE0|Q8TBE0-2|Q8TBE0-3 Bromo adjacent homology domain-containing 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13179.13179.5 21.99 18.27 1.113 2 1 1 0 532.2642 2577.3219 S184s TMT10 173 (R) LGDLGGGSRDLsPEPAPDEGPRR (D) LGDLGGGS(0.0)RDLS(0.99)PEPAPDEGPRR s:Phosphorylated S BAHD1 85848.7 14 5 636.1 256.1 HUMAN 1 -13.1505 -17.8114 GGGYPVGSPGKVGLS-p Q5JSH3;S27-p GGGYPVGSPGKVGLS 0.0872325674784369 0.828475742721892 -0.386666666666667 -0.0276666666666666 22.5570377484613 1.14209466507657 -0.386666666666667 -0.0276666666666666 0.00555004143119715 0.768759567001125 -4.45048535325163 -0.309120104712477 Q5JSH3 WDR44 Q5JSH3.S27.p_WDR44 Q5JSH3_S27s _1_1_27_27 Q5JSH3 Q5JSH3|Q5JSH3-2|Q5JSH3-4 WD repeat-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25245.25245.4 18.69 18.69 3.051 6 1 1 0 841.1224 3281.496 S27s Acetyl 2 (M) ASESDTEEFYDAPEDVHLGGGYPVGsPGK (V) AS(0.0)ES(0.0)DT(0.0)EEFY(0.0)DAPEDVHLGGGY(0.0)PVGS(0.99)PGK K:TMT10,s:Phosphorylated S WDR44 101935 2 2 95.1 607.92 HUMAN 1 -22.557 -1.1421 GGGYQAGSPQRSPGR-p Q9C0H5-2;S344-p GGGYQAGSPQRSPGR 0.316140239892734 0.509194870491774 0.165 0.087 9.36139704851149 3.93068499435645 0.165 0.087 0.115840465792954 0.404512084681738 1.87094262483033 0.903705470047517 Q9C0H5 ARHGAP39 Q9C0H5.2.S344.p_ARHGAP39 Q9C0H5-2_S344s _1_1_344_344 Q9C0H5-2 Q9C0H5-2 Isoform 2 of Rho GTPase-activating protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32818.32818.4 23.53 23.53 2.392 7 1 1 0 1261.5792 4963.2923 S344s TMT10 306 (R) YGYEPPLYEEPPVEYQAPIYDEPPMDVQFEAGGGYQAGsPQR (S) Y(0.0)GY(0.0)EPPLY(0.0)EEPPVEY(0.0)QAPIY(0.0)DEPPMDVQFEAGGGY(0.0)QAGS(0.99)PQR s:Phosphorylated S ARHGAP39 126053.9 2 5 910.1 201.84 HUMAN 1 9.3614 3.9307 GGGYTCQSGSGWDEF-p P15924;S176-p GGGYTCQSGSGWDEF 0.253012223939913 0.0827930550446836 0.186 0.195666666666667 11.3820778454403 14.3266855844812 0.186 0.195666666666667 0.0727431687690752 0.0369259299560479 2.22318671900046 2.75140089213808 P15924 DSP P15924.S176.p_DSP P15924_S176s _1_1_176_176 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19922.19922.2 20.38 20.38 1.263 5 1 1 0 1216.5349 2352.0967 S176s TMT10 168 (K) GGGGYTCQsGSGWDEFTK (H) GGGGY(0.0)T(0.0)CQS(0.99)GS(0.0)GWDEFT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DSP 334221.3 8 4 104.1 590.4 HUMAN 1 11.3821 14.3267 GGHERPPSPGLRGLL-p Q86UU1;S324-p GGHERPPSPGLRGLL 0.799316811191766 0.320022981282729 -0.0706666666666667 -0.100666666666667 1.87440082048328 6.54557833554961 -0.0706666666666666 -0.100666666666667 0.649471230461457 0.221534906598565 -0.480803978617218 -1.38085332819662 Q86UU1 PHLDB1 Q86UU1.S324.p_PHLDB1 Q86UU1_S324s _1_1_324_324 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4440.4440.5 13.15 13.15 99 1 1 1 0 386.0149 1846.0812 S324s TMT10 316 (R) KGGHERPPsPGLR (G) KGGHERPPS(1.0)PGLR K:TMT10,s:Phosphorylated S PHLDB1 152129.1 3 2 99.1 600.41 HUMAN 1 -1.8744 -6.5456 GGHLPQASPISVYLF-p Q2TAZ0-3;S1311-p GGHLPQASPISVYLF 0.615350842498504 0.00611115648741226 -0.132333333333333 -0.661 3.91253616562404 31.9132014748549 -0.132333333333333 -0.661 0.406206046234207 0.000643694580283841 -0.900373488259602 -7.02393109743178 Q2TAZ0 ATG2A Q2TAZ0.3.S1311.p_ATG2A Q2TAZ0-3_S1311s _1_1_1311_1311 Q2TAZ0-3 Q2TAZ0-3 Isoform 2 of Autophagy-related protein 2 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.26866.26866.3 23.87 23.87 2.672 4 1 1 0 987.1693 2879.5253 S1311s TMT10 1298 (R) ELAQPSGGHLPQAsPISVYLFPGER (S) ELAQPS(0.0)GGHLPQAS(0.99)PIS(0.0)VY(0.0)LFPGER s:Phosphorylated S ATG2A 215251.5 2 4 2029.1 101.69 HUMAN 1 -3.9125 -31.9132 GGHMIAVSPQKQVIT-p Q9ULM3;S627-p GGHMIAVSPQKQVIT 0.273881442558175 0.00281735300481448 -0.169333333333333 -0.781 10.6505032816319 38.5754272900215 -0.169333333333333 -0.781 0.0860893981809442 0.000138821672050453 -2.09498723378022 -9.50870940653854 Q9ULM3 YEATS2 Q9ULM3.S627.p_YEATS2 Q9ULM3_S627s_1_1_627_627 Q9ULM3 Q9ULM3 YEATS domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7626.7626.3 17.2 17.2 99 1 1 1 0 560.2972 1582.914 M623m S627s TMT10 620 (K) GGHmIAVsPQK (Q) GGHM(1.0)IAVS(1.0)PQK K:TMT10,m:Oxidized methionine,s:Phosphorylated S YEATS2 151691.8 5 11 1060.1 182.14 HUMAN 1 -10.6505 -38.5754 GGHSPTHSPEKILKL-p Q9Y5K6;S514-p GGHSPTHSPEKILKL 0.591065958633332 0.00265134466421331 -0.0866666666666667 -0.696666666666667 4.20506671654408 39.184579194241 -0.0866666666666667 -0.696666666666667 0.379746105247114 0.000120654098924483 -0.956130889535554 -9.77057541355578 Q9Y5K6 CD2AP Q9Y5K6.S514.p_CD2AP Q9Y5K6_T512tS514s_2_2_512_514 Q9Y5K6 Q9Y5K6 CD2-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6586.6586.4 11.16 11.16 1.151 3 2 2 0 503.9815 1852.9706 T512t S514s TMT10 505 (R) FNGGHSPtHsPEK (I) FNGGHS(0.0)PT(0.99)HS(0.99)PEK K:TMT10,t:Phosphorylated T,s:Phosphorylated S CD2AP 71678 18 14 413.1 321.76 HUMAN 1 -4.2051 -39.1846 GGIAAAISKTAVAPI-p P12236;S22-p GGIAAAISKTAVAPI 0.963118175966314 0.168490882631392 0.013 0.201333333333333 0.313754709857965 10.1734363436282 0.013 0.201333333333333 0.930303230407295 0.0960851706145891 0.0916106870049118 2.01102984787031 P12236 SLC25A6 P12236.S22.p_SLC25A6 P12236_S22s _1_1_22_22 P12236 P12236 ADP/ATP translocase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28046.28046.3 21.51 14.56 99 1 1 1 0 591.3317 1692.0096 S22s TMT10 11 (K) DFLAGGIAAAIsK (T) DFLAGGIAAAIS(1.0)K K:TMT10,s:Phosphorylated S SLC25A6 33093.9 1 7 2574.2 78.09 HUMAN 1 0.3138 10.1734 GGIFKIASWADLVNA-p P11172;S335-p GGIFKIASWADLVNA 0.228095422318106 0.00159168462790637 -0.292 -0.971333333333333 12.3341483778319 44.819516630325 -0.292 -0.971333333333333 0.0584231759766019 3.29646399773725e-05 -2.39174729806317 -12.5270307563389 P11172 UMPS P11172.S335.p_UMPS P11172_S335s _1_1_335_335 P11172 P11172 Uridine 5'-monophosphate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30747.30747.4 18.8 16.26 10.056 2 1 1 0 640.1036 2477.4281 S335s TMT10 333 (K) IAsWADLVNAHVVPGSGVVK (G) IAS(0.99)WADLVNAHVVPGS(0.0)GVVK K:TMT10,s:Phosphorylated S UMPS 52677.1 1 2 2067.1 99.58 HUMAN 1 -12.3341 -44.8195 GGIILTASHNPGGPN-p P36871;S117-p GGIILTASHNPGGPN 0.837215756951162 0.0062156175360252 0.0453333333333333 0.612666666666667 1.49238745233729 31.7935421384427 0.0453333333333334 0.608564288272883 0.709187798113133 0.000661676615141612 0.39320314388176 6.9849729323174 P36871 PGM1 P36871.S117.p_PGM1 P36871_S117s _1_1_117_117 P36871 P36871-2 Phosphoglucomutase-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25613.25613.2 23.31 23.31 1.291 2 1 1 0 1372.7222 2664.4874 S117s TMT10 108 (K) AIGGIILTAsHNPGGPNGDFGIK (F) AIGGIILT(0.0)AS(0.99)HNPGGPNGDFGIK K:TMT10,s:Phosphorylated S PGM1 61733.3 7 3 2909.1 66.18 HUMAN 1 1.4924 31.7935 GGIKRTVSEPSLSGL-p Q6N021;S99-p GGIKRTVSEPSLSGL 0.322370497428223 0.0823409353972692 -0.165666666666667 -0.209 9.20560322101123 14.3663985852006 -0.165666666666667 -0.209 0.120071428609484 0.0365898089173341 -1.8439597657334 -2.75873398792176 Q6N021 TET2 Q6N021.S99.p_TET2 Q6N021_S99s _1_1_99_99 Q6N021 E7EQS8|Q6N021|Q6N021-3|E7EPB1|Q6N021-2 Methylcytosine dioxygenase TET2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25862.25862.3 17.92 17.92 1.186 4 1 1 0 713.4137 2058.2575 S99s Hydrogen 97 (R) TVsEPSLSGLLQIKK (L) T(0.0)VS(0.99)EPS(0.0)LS(0.0)GLLQIKK K:TMT10-Lys-Only,s:Phosphorylated S TET2 226374.6 15 5 594.1 264.06 HUMAN 1 -9.2056 -14.3664 GGILGEGTPKESSTE-p Q96S66;T482-p GGILGEGTPKESSTE 0.454527168074746 0.400953417454561 -0.121 0.086 6.31703795635955 5.27832168554748 -0.121 0.086 0.233505010696189 0.29659773587144 -1.34085078753359 1.15458165251842 Q96S66 CLCC1 Q96S66.T482.p_CLCC1 Q96S66_T482t _1_1_482_482 Q96S66 Q96S66|Q96S66-2|Q96S66-3 Chloride channel CLIC-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15279.15279.3 8.12 8.12 5.564 2 1 1 0 566.3009 1616.926 T482t TMT10 473 (K) ETGGILGEGtPK (E) ET(0.0)GGILGEGT(0.99)PK K:TMT10,t:Phosphorylated T CLCC1 62706.1 1 1 3157.1 59.06 HUMAN 1 -6.317 5.2783 GGKAAPGYHMAKLII-p P11216;Y614-p GGKAAPGYHMAKLII 0.79813572883131 0.903595781845513 -0.0486666666666667 -0.0156666666666667 1.88656280429296 0.61375188781264 -0.0486666666666667 -0.0156666666666667 0.647654995337024 0.868210054985609 -0.483531389523941 -0.173956666379593 P11216 PYGB P11216.Y614.p_PYGB P11216_Y614y _1_1_614_614 P11216 P11216|P11217|E9PK47|P06737-2|P11217-2 Glycogen phosphorylase, brain form GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8912.8912.3 14.57 14.57 99 1 1 1 0 495.2552 1403.787 Y614y TMT10 610 (K) AAPGyHMAK (L) AAPGY(1.0)HMAK K:TMT10,y:Phosphorylated Y PYGB 97378.8 2 3 87.1 30.87 HUMAN 1 -1.8866 -0.6138 GGKDMAQSIYRPSKN-p Q13573;S446-p GGKDMAQSIYRPSKN 0.915644804115104 0.41390707868651 0.019 0.160333333333333 0.749654764122981 5.09623246867577 0.019 0.160333333333333 0.84146202974709 0.309297744595904 0.209846678069402 1.12143394288912 Q13573 SNW1 Q13573.S446.p_SNW1 Q13573_S446s _1_1_446_446 Q13573 G3V3A4|Q13573|G3V4X8 SNW domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12724.12724.3 13.45 7.76 6.834 3 1 1 0 611.9833 1753.9671 S446s TMT10 442 (K) DMAQsIYRPSK (N) DMAQS(0.99)IY(0.0)RPS(0.0)K K:TMT10,s:Phosphorylated S SNW1 61550.4 1 8 936.1 198.57 HUMAN 1 0.7497 5.0962 GGKGVWGTPGQVYDV-p Q53EL6;T126-p GGKGVWGTPGQVYDV 0.318098337086169 0.881726598410713 0.143333333333333 -0.0226666666666666 9.31418717893893 0.76762703483763 0.143333333333333 -0.0226666666666666 0.117106575726727 0.837987029335613 1.86276493570873 -0.214508952279246 Q53EL6 PDCD4 Q53EL6.T126.p_PDCD4 Q53EL6_T126t _1_1_126_126 Q53EL6 Q53EL6|Q53EL6-2 Programmed cell death protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32969.32969.4 29.88 26.86 9.42 5 1 1 0 1324.3689 5214.4778 T126t TMT10 122 (K) GVWGtPGQVYDVEEVDVKDPNYDDDQENCVYETVVLPLDER (A) GVWGT(0.99)PGQVY(0.0)DVEEVDVKDPNY(0.0)DDDQENCVY(0.0)ET(0.0)VVLPLDER K:TMT10,C:Carbamidomethylation,t:Phosphorylated T PDCD4 52133.7 1 8 476.1 301.17 HUMAN 1 9.3142 -0.7676 GGKMKQISLDIFKGL-p A0A087X0I2;S356-p GGKMKQISLDIFKGL 0.827850623461456 0.592020135778882 -0.103333333333333 -0.414 1.57766152109788 3.08064651222636 -0.103333333333333 -0.414 0.695398657449085 0.49196629369648 -0.413098770205467 -0.7366404522635 A0A087X0I2 NotFound A0A087X0I2.S356.p_NotFound A0A087X0I2_S356s_1_1_356_356 A0A087X0I2 A0A087X0I2 Complement factor I HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5972.5972.3 7.71 7.71 99 1 1 1 0 573.6503 1655.9794 Q354q S356s Hydrogen 354 (K) qIsLDIFKGLHR (V) Q(1.0)IS(1.0)LDIFKGLHR K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S CFI 44401.3 1 1 7102.1 7.71 HUMAN 1 -1.5777 -3.0806 GGKNVRRSIQGVGHM-p Q14573;S916-p GGKNVRRSIQGVGHM 0.403496030413568 0.0161306732777922 0.127666666666667 0.353 7.27675781441813 24.7572863197507 0.127666666666667 0.353 0.187207920235989 0.00334403926372405 1.50937652279583 4.97643359862676 Q14573 ITPR3 Q14573.S916.p_ITPR3 Q14573_S916s _1_1_916_916 Q14573 Q14573 Inositol 1,4,5-trisphosphate receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25189.25189.3 18.16 18.16 18.164 4 1 1 0 681.6649 1963.0125 S916s TMT10 916 (R) sIQGVGHMMSTMVLSR (K) S(0.99)IQGVGHMMS(0.0)T(0.0)MVLS(0.0)R s:Phosphorylated S ITPR3 307010.8 5 1 1377.1 148.68 HUMAN 1 7.2768 24.7573 GGKRKADSDSEDKGE-p P83916;S89-p GGKRKADSDSEDKGE 0.185302352501113 0.874318487767512 0.420666666666667 0.0163333333333333 14.3942728532273 0.820846346297032 0.420666666666667 0.0163333333333333 0.0363557170457202 0.827780831358396 2.76559957644467 0.228293527813469 P83916 CBX1 P83916.S89.p_CBX1 P83916_S89s _1_1_89_89 P83916 P83916|K7ELA4 Chromobox protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5184.5393.5 17.96 14.91 4.273 3 1 1 0 621.545 3023.7234 S89s Hydrogen 86 (R) KADsDSEDKGEESKPKK (K) KADS(0.99)DS(0.0)EDKGEES(0.0)KPKK K:TMT10-Lys-Only,s:Phosphorylated S CBX1 21531.5 46 2 1104.1 177.13 HUMAN 1 14.3943 0.8208 GGKRLSGSSEDEEDS-p Q9BW71;S332-p GGKRLSGSSEDEEDS 0.796289087702069 0.00954031346652563 0.054 0.5735 1.91089916437601 28.5008918765728 0.054 0.5735 0.644035910355573 0.00141224749263106 0.488978342399153 5.97980909956883 Q9BW71 HIRIP3 Q9BW71.S332.p_HIRIP3 Q9BW71_S330sS332s_2_2_330_332 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9150.9150.4 11.76 11.76 1.272 5 2 2 0 732.3477 2766.4361 S330s S332s TMT10 328 (K) RLsGsSEDEEDSGKGEPTAK (G) RLS(0.99)GS(0.99)S(0.0)EDEEDS(0.0)GKGEPT(0.0)AK K:TMT10,s:Phosphorylated S HIRIP3 62298.3 3 26 178.1 481.23 HUMAN 2 1.9109 28.5009 GGKRSRLTPVSPESS-p Q13501;T269-p GGKRSRLTPVSPESS 0.94478758147709 0.0207694246767137 -0.0116666666666667 -0.574333333333333 0.484943300242466 23.0163677429875 -0.0116666666666667 -0.574333333333333 0.894346208084166 0.00499301908066845 -0.139173461573447 -4.55319357771832 Q13501 SQSTM1 Q13501.T269.p_SQSTM1 Q13501_T269t _1_1_269_269 Q13501 Q13501|E7EMC7|Q13501-2 Sequestosome-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7946.7946.2 18.32 12.3 2.711 7 1 1 0 1021.995 1963.0181 T269t Hydrogen 266 (R) SRLtPVSPESSSTEEK (S) S(0.0)RLT(0.99)PVS(0.0)PES(0.0)S(0.0)S(0.0)T(0.0)EEK K:TMT10-Lys-Only,t:Phosphorylated T SQSTM1 48485.1 7 8 541.1 276.49 HUMAN 1 -0.4849 -23.0164 GGKSSQKSPELGKSS-p Q9UEG4;S745-p GGKSSQKSPELGKSS 0.766697935852592 0.123485293803842 0.0416666666666667 -0.219666666666667 2.21047783204969 11.9840400955865 0.0416666666666667 -0.219666666666667 0.601107597044273 0.0633280317759684 0.554925306145989 -2.32834413669588 Q9UEG4 ZNF629 Q9UEG4.S745.p_ZNF629 Q9UEG4_S745s _1_1_745_745 Q9UEG4 Q9UEG4 Zinc finger protein 629 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8974.8974.3 10.72 6.47 2.41 3 1 1 0 610.0109 1748.0521 S745s TMT10 741 (K) SSQKsPELGK (S) S(0.0)S(0.0)QKS(0.99)PELGK K:TMT10,s:Phosphorylated S ZNF629 98957.8 5 154 240.4 415.72 HUMAN 1 2.2105 -11.984 GGKTDFQSSDCLARE-p O15018;S320-p GGKTDFQSSDCLARE 0.213953762765075 0.110568760580572 0.185333333333333 0.180333333333333 12.9080214189096 12.6265253706094 0.185333333333333 0.180333333333333 0.0511915003286942 0.0546194676470679 2.49450601126558 2.44268709809302 O15018 PDZD2 O15018.S320.p_PDZD2 O15018_S320s _1_1_320_320 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11103.11111.4 12.92 12.92 1.13 3 1 1 0 663.3237 2570.3033 S320s TMT10 313 (K) GGKTDFQsSDCLAREEVGR (I) GGKT(0.0)DFQS(0.99)S(0.0)DCLAREEVGR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PDZD2 304146 3 1 85.1 628.64 HUMAN 1 12.908 12.6265 GGKVTGDSQPKEQGQ-p O76094;S541-p GGKVTGDSQPKEQGQ 0.176527526104725 0.167788200693427 -0.291 -0.253333333333333 14.9420565115912 10.1982388379255 -0.291 -0.253333333333333 0.0320475142147211 0.0955379935588066 -2.86759087074942 -2.01534007545628 O76094 SRP72 O76094.S541.p_SRP72 O76094_S541s _1_1_541_541 O76094 O76094 Signal recognition particle subunit SRP72 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10250.10250.3 12.27 12.27 2.295 2 1 1 0 818.7664 2374.3181 S541s TMT10 537 (K) VTGDsQPKEQGQGDLK (K) VT(0.0)GDS(0.99)QPKEQGQGDLK K:TMT10,s:Phosphorylated S SRP72 75175.4 1 4 1363.1 149.83 HUMAN 1 -14.9421 -10.1982 GGLAPLPSAGDLFST-p Q9NQG5;S318-p GGLAPLPSAGDLFST 0.206669838771857 0.15328365124711 0.204666666666667 0.253666666666667 13.2383384651447 10.7115970369723 0.204666666666667 0.253666666666667 0.0474423456674721 0.0848868262160428 2.55410425758282 2.10473656486614 Q9NQG5 RPRD1B Q9NQG5.S318.p_RPRD1B Q9NQG5_S318s _1_1_318_318 Q9NQG5 Q9NQG5 Regulation of nuclear pre-mRNA domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.37151.37151.4 14.7 14.7 1.382 7 1 1 0 886.2059 3461.8365 S318s TMT10 295 (K) SHIQSLPDLSLLPNVTGGLAPLPsAGDLFSTD (-) S(0.0)HIQS(0.0)LPDLS(0.0)LLPNVT(0.0)GGLAPLPS(0.99)AGDLFS(0.0)T(0.0)D s:Phosphorylated S RPRD1B 37013.2 2 4 1310.1 155.23 HUMAN 1 13.2383 10.7116 GGLCRRCSAGLGALA-p H3BSS5;S29-p GGLCRRCSAGLGALA 0.0884809517257935 0.202900524386239 -0.358666666666667 0.246666666666667 22.4502586338263 9.11366287727711 -0.358666666666667 0.246666666666667 0.00568819055159135 0.122640443471877 -4.42565845732765 1.82737392998891 H3BSS5 NotFound H3BSS5.S29.p_NotFound H3BSS5_S29s _1_1_29_29 H3BSS5 H3BSS5 BTB/POZ domain-containing protein KCTD5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12088.12088.4 17.52 17.52 17.521 3 1 1 0 589.0708 2273.2912 S29s TMT10 27 (R) RCsAGLGALAQRPGSVSK (W) RCS(0.99)AGLGALAQRPGS(0.0)VS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KCTD5 27753.3 1 2 3922.1 40.61 HUMAN 1 -22.4503 9.1137 GGLDDRYSLVSEQLE-p Q9Y446-2;S211-p GGLDDRYSLVSEQLE 0.143060382948495 0.639649946505501 0.272666666666667 0.0563333333333334 17.253086664849 2.64268000884994 0.272666666666667 0.0563333333333334 0.0188231079761626 0.544166746717146 3.31264979739903 0.646768002179692 Q9Y446 PKP3 Q9Y446.2.S211.p_PKP3 Q9Y446-2_S211s _1_1_211_211 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24082.24082.3 16.62 12.8 1.37 7 1 1 0 1035.5111 3024.5476 S211s TMT10 201 (R) LGPGGLDDRYsLVSEQLEPAATSTYR (A) LGPGGLDDRY(0.0)S(0.99)LVS(0.0)EQLEPAAT(0.0)S(0.0)T(0.0)Y(0.0)R s:Phosphorylated S PKP3 89109.7 2 8 454.1 307.47 HUMAN 1 17.2531 2.6427 GGLEAMNSMGGFGGV-p A0A0A0MQW0;S391-p GGLEAMNSMGGFGGV 0.266431557797534 0.962448045334504 0.168666666666667 0.00766666666666668 10.8855195393757 0.236925596030252 0.168666666666667 0.00766666666666668 0.0815545218958126 0.946907247066171 2.13606515007826 0.069731146346825 A0A0A0MQW0 NotFound A0A0A0MQW0.S391.p_NotFound A0A0A0MQW0_S391s_1_1_391_391 A0A0A0MQW0 Q9P2K5|A0A0A0MR39|Q9P2K5-2|A0A0A0MQW0|A0A087WUT0|A0A0C4DGV1 Myelin expression factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32616.32616.3 19.48 19.48 99 1 1 1 0 836.7339 2427.2111 N390n S391s TMT10 377 (R) IGGGIGFGGLEAMnsMGGFGGVGR (M) IGGGIGFGGLEAMN(1.0)S(1.0)MGGFGGVGR n:Deamidated,s:Phosphorylated S MYEF2 62184.4 1 2 670.1 249.19 HUMAN 1 10.8855 0.2369 GGLEKDGSFGEGLTM-p Q9ULT0-4;S671-p GGLEKDGSFGEGLTM 0.327418035703243 0.00299868432821594 -0.428333333333333 0.699 9.07075658871 37.9019579639829 -0.428333333333333 0.699 0.123858079334978 0.000162107908874797 -1.82061202782607 9.22657922276226 Q9ULT0 TTC7A Q9ULT0.4.S671.p_TTC7A Q9ULT0-4_S671s _1_1_671_671 Q9ULT0-4 Q9ULT0-4|G5E9G4 Isoform 3 of Tetratricopeptide repeat protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17811.17811.3 13.59 13.59 5.404 2 1 1 0 679.696 1957.1032 S671s TMT10 669 (K) DGsFGEGLTMKK (Q) DGS(0.99)FGEGLT(0.0)MKK K:TMT10,s:Phosphorylated S TTC7A 99850 6 3 1883.1 109.27 HUMAN 1 -9.0708 37.902 GGLFRRGSLLGSMKL-p Q9HDC5;S216-p GGLFRRGSLLGSMKL 0.328079739434141 0.00441986327131149 -0.139666666666667 -0.613 9.05244457329785 34.5963351537956 -0.139666666666667 -0.613 0.124381429177116 0.000347029572003826 -1.8174418065658 -7.94678661854774 Q9HDC5 JPH1 Q9HDC5.S216.p_JPH1 Q9HDC5_S216s _1_1_216_216 Q9HDC5 Q9HDC5 Junctophilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13651.13651.2 10.14 10.14 10.139 2 1 1 0 743.9153 1406.8554 S216s TMT10 214 (R) RGsLLGSMK (L) RGS(0.99)LLGS(0.0)MK K:TMT10,s:Phosphorylated S JPH1 72141.1 3 3 675.1 247.46 HUMAN 1 -9.0524 -34.5963 GGLGLRRSPEMSGKI-p Q13905-4;S10-p GGLGLRRSPEMSGKI 0.42210149371171 0.398483542554811 0.116666666666667 0.115333333333333 6.8994270768693 5.31242575885389 0.116666666666667 0.115333333333333 0.204200730937597 0.294277748154695 1.44339671618716 1.16076877637715 Q13905 RAPGEF1 Q13905.4.S10.p_RAPGEF1 Q13905-4_S10s _1_1_10_10 Q13905-4 Q13905-4 Isoform 4 of Rap guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10326.10326.3 13.88 13.88 1.115 3 1 1 0 628.3187 1802.9744 S10s Acetyl 2 (M) SGGLGLRRsPEMSGK (I) S(0.0)GGLGLRRS(0.99)PEMS(0.0)GK K:TMT10,s:Phosphorylated S RAPGEF1 123026.2 7 2 676.1 246.9 HUMAN 1 6.8994 5.3124 GGLHDFRSPPPGMGL-p P23246;S33-p GGLHDFRSPPPGMGL 0.702883247704392 0.0256601056912358 0.0543333333333333 -0.403666666666667 2.8777427316571 21.6397529627435 0.0543333333333333 -0.403666666666667 0.515496506976908 0.00685527219798018 0.695469161310369 -4.23564779567955 P23246 SFPQ P23246.S33.p_SFPQ P23246_S33s _1_1_33_33 P23246 P23246|P23246-2 Splicing factor, proline- and glutamine-rich HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12885.12885.4 11.78 11.78 99 1 1 1 0 590.5389 2279.1665 S33s TMT10 26 (R) GGLHDFRsPPPGMGLNQNR (G) GGLHDFRS(1.0)PPPGMGLNQNR s:Phosphorylated S SFPQ 76262.2 3 1 1659.1 123.09 HUMAN 1 2.8777 -21.6398 GGLIEPDTPGRVPLD-p Q15149;T4539-p GGLIEPDTPGRVPLD 0.869570903754212 0.384281224018588 0.0253333333333333 0.121333333333333 1.18563046114444 5.51991130206978 0.0253333333333333 0.121333333333333 0.761091644039868 0.28054909351794 0.31981489640134 1.19827509736486 Q15149 PLEC Q15149.T4539.p_PLEC Q15149_T4539t _1_1_4539_4539 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.35865.35865.4 15.6 11.7 2.805 3 1 1 0 859.7006 3355.8099 T4539t TMT10 4524 (R) FLEVQYLTGGLIEPDtPGRVPLDEALQR (G) FLEVQY(0.0)LT(0.0)GGLIEPDT(0.99)PGRVPLDEALQR t:Phosphorylated T PLEC 533778 2 39 44.1 794.85 HUMAN 1 1.1856 5.5199 GGLPRAESPSPAPPP-p Q9BUA3;S308-p GGLPRAESPSPAPPP 0.921972459506391 0.864252658206572 0.015 -0.0206666666666667 0.691841264031256 0.893534818385797 0.015 -0.0206666666666667 0.85273850462863 0.814041448055659 0.194687397311931 -0.246931344946305 Q9BUA3 C11orf84 Q9BUA3.S308.p_C11orf84 Q9BUA3_S308s _1_1_308_308 Q9BUA3 Q9BUA3 SPIN1-docking protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9147.9147.2 15.15 15.15 3.396 2 1 1 0 678.3214 1275.6692 S308s Hydrogen 306 (R) AEsPSPAPPPGLR (G) AES(0.99)PS(0.0)PAPPPGLR s:Phosphorylated S C11orf84 41321.3 8 9 884.1 206.69 HUMAN 1 0.6918 -0.8935 GGLQDSDTEDECWSD-p Q9H6H4;T196-p GGLQDSDTEDECWSD 0.456411337786712 0.638659566628178 0.123833333333333 0.0503333333333334 6.27988392948444 2.65240426275103 0.123833333333333 0.0503333333333334 0.235511222631154 0.542949670276767 1.33427326483561 0.648796830893731 Q9H6H4 REEP4 Q9H6H4.T196.p_REEP4 Q9H6H4_S194sT196t_2_2_194_196 Q9H6H4 Q9H6H4 Receptor expression-enhancing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19632.19632.3 18.11 18.11 3.93 4 2 2 0 943.0384 2667.1678 S194s T196t TMT10 188 (R) AGGLQDsDtEDECWSDTEAVPR (A) AGGLQDS(0.99)DT(0.99)EDECWS(0.0)DT(0.0)EAVPR C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T REEP4 29565.8 4 8 1742.1 118.21 HUMAN 2 6.2799 2.6524 GGLRRGCSPPAPAGS-p Q9C073;S29-p GGLRRGCSPPAPAGS 0.758996898562859 0.567866779963253 -0.0433333333333333 0.0663333333333334 2.29428858348688 3.31287799597624 -0.0433333333333333 0.0663333333333334 0.589618554397055 0.466350235490476 -0.573031178146585 0.783158769569771 Q9C073 FAM117A Q9C073.S29.p_FAM117A Q9C073_S29s _1_1_29_29 Q9C073 Q9C073 Protein FAM117A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4346.4346.3 11.7 8.07 11.701 2 1 1 0 540.2624 1538.8059 S29s TMT10 26 (R) RGCsPPAPAGSPR (A) RGCS(0.99)PPAPAGS(0.0)PR C:Carbamidomethylation,s:Phosphorylated S FAM117A 49059.4 4 1 640.1 255.25 HUMAN 1 -2.2943 3.3129 GGLRRLQSLIKNITL-p Q14527;S635-p GGLRRLQSLIKNITL 0.487879237244645 0.0500816194069798 -0.170666666666667 -0.299666666666667 5.74336400934243 17.382255546493 -0.170666666666667 -0.299666666666667 0.266479373757193 0.0182715102276462 -1.23870792588217 -3.33569313635427 Q14527 HLTF Q14527.S635.p_HLTF Q14527_S635s _1_1_635_635 Q14527 Q14527 Helicase-like transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17955.17955.3 8.38 3.74 99 1 1 1 0 465.9548 1315.8826 S635s TMT10 632 (R) RLQsLIK (N) RLQS(1.0)LIK K:TMT10,s:Phosphorylated S HLTF 114953.6 1 3 1484.1 138.09 HUMAN 1 -5.7434 -17.3823 GGLRRNQSLPVIMGS-p O60296;S889-p GGLRRNQSLPVIMGS 0.376746768297789 0.614402369107123 0.158 0.115333333333333 7.83777101219601 2.87619983101178 0.158 0.115333333333333 0.164521590278008 0.515679677895562 1.60700505470962 0.695057660604103 O60296 TRAK2 O60296.S889.p_TRAK2 O60296_S889s _1_1_889_889 O60296 O60296 Trafficking kinesin-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29316.29316.3 18.62 18.62 7.663 5 1 1 0 910.4691 2649.4145 S889s TMT10 887 (R) NQsLPVIMGSFAAPVCTSSPK (M) NQS(0.99)LPVIMGS(0.0)FAAPVCT(0.0)S(0.0)S(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TRAK2 102330.1 1 3 3071.1 61.56 HUMAN 1 7.8378 2.8762 GGLRRSNSAPLIHGL-p Q96E09;S37-p GGLRRSNSAPLIHGL 0.195739977752225 0.0974703400636045 0.233 0.205666666666667 13.8154020460514 13.3686735461221 0.233 0.205666666666667 0.0415393594597348 0.0460397169970415 2.6590881518657 2.57625532395408 Q96E09 FAM122A Q96E09.S37.p_FAM122A Q96E09_S37s _1_1_37_37 Q96E09 Q96E09 Protein FAM122A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23247.23247.2 16.56 16.56 1.118 6 1 1 0 1431.2043 2781.4369 S37s TMT10 35 (R) SNsAPLIHGLSDTSPVFQAEAPSAR (R) S(0.0)NS(0.99)APLIHGLS(0.0)DT(0.0)S(0.0)PVFQAEAPS(0.0)AR s:Phosphorylated S FAM122A 30813.8 10 2 509.1 287.77 HUMAN 1 13.8154 13.3687 GGLSLSPSPERRKPP-p Q96GP6;S653-p GGLSLSPSPERRKPP 0.565909189704471 0.443226645783173 0.108666666666667 0.0873333333333334 4.55386425271669 4.7059212001683 0.108666666666667 0.0873333333333333 0.350439921782355 0.338382488530205 1.02162753650498 1.04967847202965 Q96GP6 SCARF2 Q96GP6.S653.p_SCARF2 Q96GP6_S653s _1_1_653_653 Q96GP6 A0A096LNX8|Q96GP6|Q96GP6-2 Scavenger receptor class F member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19357.19357.3 10.35 9.47 1.235 3 1 1 0 569.9563 1627.8853 S653s TMT10 643 (R) GEIGGLSLSPsPER (R) GEIGGLS(0.0)LS(0.0)PS(0.99)PER s:Phosphorylated S SCARF2 97041.7 1 2 2656.1 74.96 HUMAN 1 4.5539 4.7059 GGMGKIPSAVSTVSM-p P19634;S599-p GGMGKIPSAVSTVSM 0.206108312152609 0.0104546087091736 0.218 0.499666666666667 13.2662861819944 27.7913723183539 0.218 0.499666666666667 0.0471380249351894 0.00166288711500526 2.55916282651043 5.77900728061844 P19634 SLC9A1 P19634.S599.p_SLC9A1 P19634_S599s _1_1_599_599 P19634 P19634 Sodium/hydrogen exchanger 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27114.27114.5 23.26 21.09 1.187 5 1 1 0 756.0078 3696.0432 S599s TMT10 584 (K) QAIELVESGGMGKIPsAVSTVSMQNIHPK (S) Q(0.0)AIELVES(0.0)GGM(0.0)GKIPS(0.99)AVS(0.0)T(0.0)VS(0.0)M(0.0)QN(0.0)IHPK K:TMT10,s:Phosphorylated S SLC9A1 91274.8 5 1 732.1 235.73 HUMAN 1 13.2663 27.7914 GGMTRRNTYVCSERT-p J3KNR0;T530-p GGMTRRNTYVCSERT 0.886998410068536 0.288397657173316 0.0263333333333333 -0.116666666666667 1.01628242196376 7.12463890842524 0.0263333333333333 -0.116666666666667 0.7913557418145 0.193881383077854 0.277957729411469 -1.48239655473527 J3KNR0 NotFound J3KNR0.T530.p_NotFound J3KNR0_T530t _1_1_530_530 J3KNR0 J3KNR0|P27448-7|A0A0A0MT23|P27448-2|A0A0A0MSZ1|P27448-4|P27448-3|P27448-6 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4248.4248.3 11.62 11.62 7.531 3 1 1 0 498.5648 1413.7106 T530t TMT10 528 (R) RNtYVCSER (T) RNT(0.99)Y(0.0)VCS(0.0)ER C:Carbamidomethylation,t:Phosphorylated T MARK3 87513.5 1 37 200.3 451.67 HUMAN 1 1.0163 -7.1246 GGNAKDFSPGLFEDP-p Q7Z5J4;S683-p GGNAKDFSPGLFEDP 0.118247488683981 0.0341416231899549 -0.304 0.349666666666667 19.2870241487553 19.7628739974725 -0.304 0.349666666666667 0.0117841316339991 0.0105611837850487 -3.72758121608222 3.82471946829622 Q7Z5J4 RAI1 Q7Z5J4.S683.p_RAI1 Q7Z5J4_S683s _1_1_683_683 Q7Z5J4 Q7Z5J4|Q7Z5J4-2|A0A1W2PQJ7|Q7Z5J4-3 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30078.30078.3 22.53 18.31 2.376 3 1 1 0 1011.525 2952.5962 S683s TMT10 681 (K) DFsPGLFEDPSVAFATPDPKK (T) DFS(0.99)PGLFEDPS(0.0)VAFAT(0.0)PDPKK K:TMT10,s:Phosphorylated S RAI1 206315.3 5 4 142.1 522.21 HUMAN 1 -19.287 19.7629 GGNFETPSKRAPAKG-p Q16625;S378-p GGNFETPSKRAPAKG 0.579947184508717 0.456898927853257 -0.0933333333333333 -0.0966666666666667 4.35300811041056 4.53632105101204 -0.0933333333333334 -0.0966666666666667 0.367027993058966 0.351858376824901 -0.984034129307499 -1.01816685148877 Q16625 OCLN Q16625.S378.p_OCLN Q16625_S378s _1_1_378_378 Q16625 Q16625|A0A0G2JMZ8|Q16625-3|Q16625-2|Q16625-4|Q16625-5 Occludin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12442.12442.3 16.07 16.07 2.028 5 1 1 0 604.6264 1731.8954 S378s TMT10 368 (R) YSSGGNFETPsK (R) Y(0.0)S(0.0)S(0.0)GGNFET(0.0)PS(0.99)K K:TMT10,s:Phosphorylated S OCLN 59542.1 1 7 840.1 214.78 HUMAN 1 -4.353 -4.5363 GGNFGGRSSGPYGGG-p P09651-2;S285-p GGNFGGRSSGPYGGG 0.401796102098674 0.0545478476546813 -0.193666666666667 -0.305 7.3093609710979 16.839984680884 -0.193666666666667 -0.305 0.185807783597442 0.0207014865093113 -1.51506391483976 -3.22875311823101 P09651 HNRNPA1 P09651.2.S285.p_HNRNPA1 P09651-2_S285s _1_1_285_285 P09651-2 P09651|P09651-2|F8W6I7|P09651-3 Isoform A1-A of Heterogeneous nuclear ribonucleoprotein A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12312.12312.2 18.53 12.98 1.278 4 1 1 0 969.4586 1857.9445 S285s Hydrogen 285 (R) sSGPYGGGGQYFAKPR (N) S(0.99)S(0.0)GPY(0.0)GGGGQY(0.0)FAKPR K:TMT10-Lys-Only,s:Phosphorylated S HNRNPA1 34309.7 15 10 504.1 289.99 HUMAN 1 -7.3094 -16.84 GGNIIVATPGRLEDM-p Q8NHQ9;T141-p GGNIIVATPGRLEDM 0.821896268924698 0.0844368193399363 -0.0506666666666667 0.195333333333333 1.63986795725253 14.2117093004629 -0.0506666666666667 0.195333333333333 0.685509068330363 0.0379165723186708 -0.427483989667483 2.73020423058557 Q8NHQ9 DDX55 Q8NHQ9.T141.p_DDX55 Q8NHQ9_T141t _1_1_141_141 Q8NHQ9 Q8NHQ9|F5H5U2|E7EX41 ATP-dependent RNA helicase DDX55 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26834.26834.3 18.34 18.34 99 1 1 1 0 804.4072 2331.2441 T141t TMT10 132 (K) QQGGNIIVAtPGRLEDMFR (R) Q(0.0)QGGN(0.0)IIVAT(1.0)PGRLEDM(0.0)FR t:Phosphorylated T DDX55 69116.1 1 1 1773.1 116.04 HUMAN 1 -1.6399 14.2117 GGNLPPVSPNDSGAK-p Q9UK61;S1103-p GGNLPPVSPNDSGAK 0.922640117724435 0.466050592228306 0.0153333333333333 -0.0816666666666666 0.685837444769491 4.4209501447799 0.0153333333333333 -0.0816666666666666 0.853918171539068 0.361330802428626 0.193104644665457 -0.996604704251534 Q9UK61 FAM208A Q9UK61.S1103.p_FAM208A Q9UK61_S1103s _1_1_1103_1103 Q9UK61 Q9UK61|Q9UK61-4|Q9UK61-3|Q9UK61-2|A0A087X0F1 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12891.13533.3 17.97 14.67 2.684 2 1 1 0 650.003 1868.0278 S1103s TMT10 1096 (K) GGNLPPVsPNDSGAK (I) GGNLPPVS(0.99)PNDS(0.0)GAK K:TMT10,s:Phosphorylated S FAM208A 190568.5 12 14 246.1 411.17 HUMAN 1 0.6858 -4.421 GGNRFEPYANPTKRY-p P52272;Y64-p GGNRFEPYANPTKRY 0.548865378149301 0.457604795899199 -0.384333333333333 -0.141 4.80826140705161 4.52651050248707 -0.384333333333333 -0.141 0.330501822970593 0.35265411005291 -1.0688009666433 -1.01633739527001 P52272 HNRNPM P52272.Y64.p_HNRNPM P52272_Y64y _1_1_64_64 P52272 P52272|A0A087X0X3|P52272-2|M0R0Y6 Heterogeneous nuclear ribonucleoprotein M GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8855.8892.3 12.34 7.46 2.771 2 1 1 0 715.7051 2065.1343 Y64y TMT10 56 (K) RGGNRFEPyANPTK (R) RGGNRFEPY(0.99)ANPT(0.0)K K:TMT10,y:Phosphorylated Y HNRNPM 77799.7 2 1 288.1 12.34 HUMAN 1 -4.8083 -4.5265 GGNSREPSPLPELAL-p Q13207;S657-p GGNSREPSPLPELAL 0.900099475507307 0.293512078865101 0.025 -0.14 0.894596667681717 7.02684177367854 0.025 -0.14 0.813842439384915 0.19829685331458 0.247226041888634 -1.46530452266699 Q13207 TBX2 Q13207.S657.p_TBX2 Q13207_S657s _1_1_657_657 Q13207 Q13207 T-box transcription factor TBX2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17698.17698.3 12.91 12.91 3.6 2 1 1 0 715.374 2064.1399 S657s TMT10 648 (K) AAGGNSREPsPLPELALR (K) AAGGNS(0.0)REPS(0.99)PLPELALR s:Phosphorylated S TBX2 75292.9 2 4 2245.1 91.76 HUMAN 1 0.8946 -7.0268 GGNTADASSEEEGDR-p Q9Y3E1;S121-p GGNTADASSEEEGDR 0.197649293626488 0.00383473386221413 -0.323333333333333 0.618333333333333 13.724133109538 35.7721273134673 -0.323333333333333 0.618333333333333 0.0424215652682019 0.000264720313609582 -2.64240708331189 8.38284967952529 Q9Y3E1 HDGFRP3 Q9Y3E1.S121.p_HDGFRP3 Q9Y3E1_S121sS122s_2_2_121_122 Q9Y3E1 Q9Y3E1 Hepatoma-derived growth factor-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17534.17534.4 17.84 17.84 1.377 9 2 2 0 1186.2581 4581.0661 N116n S121s S122s TMT10 96 (K) FTGYQAIQQQSSSETEGEGGnTADAssEEEGDRVEEDGK (G) FT(0.0)GY(0.0)QAIQQQS(0.0)S(0.0)S(0.0)ET(0.0)EGEGGN(1.0)T(0.0)ADAS(0.99)S(0.99)EEEGDRVEEDGK K:TMT10,n:Deamidated,s:Phosphorylated S HDGFL3 22676.4 5 3 2167.1 94.71 HUMAN 1 -13.7241 35.7721 GGNTAVLTPLSPSAS-p Q9Y2L5;T968-p GGNTAVLTPLSPSAS 0.41344974098146 0.487893827811209 -0.153666666666667 -0.066 7.07348066812921 4.16477397567571 -0.153666666666667 -0.066 0.196178736535103 0.383285687610479 -1.47386958485674 -0.948332617512639 Q9Y2L5 TRAPPC8 Q9Y2L5.T968.p_TRAPPC8 Q9Y2L5_T968t _1_1_968_968 Q9Y2L5 Q9Y2L5|J3QQJ5 Trafficking protein particle complex subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26975.26975.3 17.73 16.07 1.26 8 1 1 0 1229.6046 3606.8303 T968t TMT10 954 (K) RPEFFTFGGNTAVLtPLSPSASENCSAYK (T) RPEFFT(0.0)FGGNT(0.0)AVLT(0.99)PLS(0.0)PS(0.0)AS(0.0)ENCS(0.0)AY(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T TRAPPC8 162648.8 2 5 1423.1 144.01 HUMAN 1 -7.0735 -4.1648 GGPATPLSPTRLSRL-p Q03252;S37-p GGPATPLSPTRLSRL 0.563005808318766 0.00827722160832736 -0.101666666666667 -0.621 4.59465543915362 29.6133838077304 -0.101666666666667 -0.621 0.347163818101319 0.00109310434156721 -1.02922359774895 -6.30552627188622 Q03252 LMNB2 Q03252.S37.p_LMNB2 Q03252_S37s _1_1_37_37 Q03252 Q03252 Lamin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9872.9872.2 13.78 13.78 1.569 3 1 1 0 717.3714 1353.7688 S37s TMT10 29 (R) AGGPATPLsPTR (L) AGGPAT(0.0)PLS(0.99)PT(0.0)R s:Phosphorylated S LMNB2 70061.3 6 21 440.2 312.01 HUMAN 1 -4.5947 -29.6134 GGPCRPPSPKDTGSG-p Q6ZMY3;S260-p GGPCRPPSPKDTGSG 0.617306864410826 0.0497473527551703 0.0723333333333333 0.285333333333333 3.88817105044852 17.4265309681069 0.0723333333333333 0.285333333333333 0.408491378577851 0.0180861822659773 0.895692158669194 3.34449287102958 Q6ZMY3 SPOCD1 Q6ZMY3.S260.p_SPOCD1 Q6ZMY3_S260s_1_1_260_260 Q6ZMY3 Q6ZMY3|Q6ZMY3-2|Q6ZMY3-5 SPOC domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26308.26308.4 14.22 12.18 1.303 3 1 1 0 821.41 3201.6411 N236n S260s Hydrogen 234 (R) GDnLLSVGDPPQVADLESLGGPCRPPsPK (D) GDN(1.0)LLS(0.0)VGDPPQVADLES(0.0)LGGPCRPPS(0.99)PK C:Carbamidomethylation,K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S SPOCD1 132021.7 8 3 2060.1 100.05 HUMAN 1 3.8882 17.4265 GGPEAAKSDETAAK_-p P04792;S199-p GGPEAAKSDETAAK_ 0.825130077485234 0.0750180027556397 -0.0556666666666667 -0.241666666666667 1.60935501649083 14.9301386857254 -0.0556666666666667 -0.241666666666667 0.690342320996117 0.0321355791663029 -0.420441157726715 -2.86350097833129 P04792 HSPB1 P04792.S199.p_HSPB1 P04792_S199s _1_1_199_199 P04792 P04792|C9J3N8 Heat shock protein beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11407.11407.3 19.72 19.72 2.244 2 1 1 0 804.4312 2331.3123 S199s TMT10 189 (R) AQLGGPEAAKsDETAAK (-) AQLGGPEAAKS(0.99)DET(0.0)AAK K:TMT10,s:Phosphorylated S HSPB1 22839.1 4 16 357.1 346.69 HUMAN 1 -1.6094 -14.9301 GGPELPPSPASPPEQ-p Q96N64;S116-p GGPELPPSPASPPEQ 0.173693396415861 0.6684220242286 0.287333333333333 0.0893333333333333 15.1435833936824 2.39379892089331 0.287333333333333 0.0893333333333333 0.0305943802857997 0.576262166831143 2.90542399168074 0.594273198690351 Q96N64 PWWP2A Q96N64.S116.p_PWWP2A Q96N64_S116sS119s_2_2_116_119 Q96N64 Q96N64 PWWP domain-containing protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18946.18946.4 19.71 19.71 9.221 3 2 2 0 880.9166 3360.6909 S116s S119s TMT10 99 (R) VAESAAAAPQGGPELPPsPAsPPEQPPAPEER (E) VAES(0.0)AAAAPQGGPELPPS(0.99)PAS(0.99)PPEQPPAPEER s:Phosphorylated S PWWP2A 82415.3 1 6 1984.1 104.07 HUMAN 1 15.1436 2.3938 GGPEPGPYAQPSVNT-p P46108;Y221-p GGPEPGPYAQPSVNT 0.189785517203716 0.176305251274796 0.496666666666667 0.319666666666667 14.1222972642283 9.9120576739498 0.496666666666667 0.319666666666667 0.0387052853490655 0.10204558802821 2.71540021440723 1.96564881475294 P46108 CRK P46108.Y221.p_CRK P46108_Y221y _1_1_221_221 P46108 P46108 Adapter molecule crk GG20160819_MSz_CCLE_T4D7_pY_Injection_02.29886.29886.5 34.57 34.57 5.849 9 1 1 0 1126.9749 5550.8356 Y221y TMT10 190 (K) YRPASASVSALIGGNQEGSHPQPLGGPEPGPyAQPSVNTPLPNLQNGPIYAR (V) Y(0.0)RPAS(0.0)AS(0.0)VS(0.0)ALIGGNQEGS(0.0)HPQPLGGPEPGPY(0.99)AQPS(0.0)VNT(0.0)PLPNLQNGPIY(0.0)AR y:Phosphorylated Y CRK 33887.1 6 2 38.1 53.65 HUMAN 1 14.1223 9.9121 GGPGKSPTQGST___-p Q6P582;T154-p GGPGKSPTQGST___ 0.274481083437932 0.0226033178641582 0.256333333333333 -0.388 10.6226465764882 22.4783358098298 0.256333333333333 -0.388 0.0866433712949463 0.00565153496724218 2.09012418967355 -4.42736447742738 Q6P582 MZT2A Q6P582.T154.p_MZT2A Q6P582_T154t _1_1_154_154 Q6P582 Q6P582 Mitotic-spindle organizing protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5346.5346.3 7.42 7.42 1.184 4 1 1 0 556.95 1588.8695 T154t TMT10 146 (K) GGGPGKSPtQGST (-) GGGPGKS(0.0)PT(0.99)QGS(0.0)T(0.0) K:TMT10,t:Phosphorylated T MZT2A 16277.4 2 6 2354.1 86.87 HUMAN 1 10.6226 -22.4783 GGPGSRRSNYNLEGI-p B7WPE2;S208-p GGPGSRRSNYNLEGI 0.451989274376449 0.891326488944317 -0.132333333333333 -0.0223333333333333 6.36365069667038 0.701622695084363 -0.132333333333333 -0.0223333333333333 0.231012207596766 0.850820078942769 -1.34909619021767 -0.197243830451373 B7WPE2 EML3 B7WPE2.S208.p_EML3 B7WPE2_S208s _1_1_208_208 B7WPE2 Q32P44-2|B7WPE2|G3V1D0 Echinoderm microtubule associated protein like 3, isoform CRA_e HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20733.20733.3 16.63 10.85 4.769 3 1 1 0 587.9792 1681.9525 S208s TMT10 208 (R) sNYNLEGISVK (M) S(0.99)NY(0.0)NLEGIS(0.0)VK K:TMT10,s:Phosphorylated S EML3 96366.1 1 8 1068.1 181 HUMAN 1 -6.3637 -0.7016 GGPGSSLTLPKVRAP-p Q9ULM0;T311-p GGPGSSLTLPKVRAP 0.625103302677489 0.111712876108522 -0.0996666666666667 -0.171666666666667 3.78900643038614 12.5658115729493 -0.0996666666666667 -0.171666666666667 0.417925967918293 0.0553884029084637 -0.876576859793322 -2.43183356203394 Q9ULM0 PLEKHH1 Q9ULM0.T311.p_PLEKHH1 Q9ULM0_T311t _1_1_311_311 Q9ULM0 Q9ULM0 Pleckstrin homology domain-containing family H member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17681.17681.3 11.64 7.2 1.491 3 1 1 0 560.9708 1600.931 T311t TMT10 303 (R) EGGPGSSLtLPK (V) EGGPGS(0.0)S(0.0)LT(0.99)LPK K:TMT10,t:Phosphorylated T PLEKHH1 152827.1 4 6 981.1 192.43 HUMAN 1 -3.789 -12.5658 GGPKEEESPV_____-p P53985;S498-p GGPKEEESPV_____ 0.726488633986434 0.0181749418560776 -0.0766666666666667 0.396333333333333 2.6320481578805 23.9641529314922 -0.0766666666666667 0.396333333333333 0.545500539211308 0.00401406782906337 -0.644632274865351 4.78047551103481 P53985 SLC16A1 P53985.S498.p_SLC16A1 P53985_S498s _1_1_498_498 P53985 P53985 Monocarboxylate transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10440.10440.4 15.91 15.91 15.909 3 1 1 0 739.1137 2873.4619 S498s TMT10 480 (K) AAESPDQKDTDGGPKEEEsPV (-) AAES(0.0)PDQKDT(0.0)DGGPKEEES(0.99)PV K:TMT10,s:Phosphorylated S SLC16A1 54627.8 4 2 3405.1 51.89 HUMAN 1 -2.632 23.9642 GGPLGVDSPSAELDK-p P78364;S786-p GGPLGVDSPSAELDK 0.24787473743719 0.358280012288423 0.201 0.108 11.5739144940586 5.91420677320262 0.201 0.108 0.0695998895783687 0.25620011637463 2.25697877354487 1.26896728876656 P78364 PHC1 P78364.S786.p_PHC1 P78364_S786s_1_1_786_786 P78364 P78364 Polyhomeotic-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23621.23621.4 14.01 14.01 1.273 7 1 1 0 1145.1156 4496.4542 N776n S786s TMT10 760 (K) ESEKPLQTGLPTGLTEnQSGGPLGVDsPSAELDKK (A) ES(0.0)EKPLQT(0.0)GLPT(0.0)GLT(0.0)EN(1.0)QS(0.0)GGPLGVDS(0.99)PS(0.0)AELDKK K:TMT10,n:Deamidated,s:Phosphorylated S PHC1 106159.3 2 5 1503.1 135.84 HUMAN 1 11.5739 5.9142 GGPRRTLSAPPAQRR-p O43900;S491-p GGPRRTLSAPPAQRR 0.409512605417896 0.567716662994563 0.173 -0.103333333333333 7.14705766820068 3.3153223638312 0.173 -0.103333333333333 0.192883124787869 0.466087830409382 1.48673112665975 -0.783644596329804 O43900 PRICKLE3 O43900.S491.p_PRICKLE3 O43900_S491s _1_1_491_491 O43900 O43900|H0Y413|O43900-2 Prickle planar cell polarity protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7773.7773.2 8.35 1.88 2.579 2 1 1 0 625.3292 1169.684 S491s TMT10 489 (R) TLsAPPAQR (R) T(0.0)LS(0.99)APPAQR s:Phosphorylated S PRICKLE3 70833 1 3 3620.1 46.82 HUMAN 1 7.1471 -3.3153 GGPTSHPSPVPPPAS-p J3KR72;S683-p GGPTSHPSPVPPPAS 0.902578934847365 0.0318508560004104 -0.0196666666666667 0.460333333333333 0.875061446923511 20.2118781633501 -0.0196666666666667 0.460333333333333 0.817511471156066 0.00952384203932534 -0.242238447304276 3.92085134802935 J3KR72 NotFound J3KR72.S683.p_NotFound J3KR72_S683s _1_1_683_683 J3KR72 J3KR72|P49848-3|P49848-2 Transcription initiation factor TFIID subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17339.17339.4 16.48 16.48 1.531 8 1 1 0 806.1563 3141.6403 S683s TMT10 676 (K) GGPTSHPsPVPPPASSPSPLSGSALCGGK (Q) GGPT(0.0)S(0.0)HPS(0.99)PVPPPAS(0.0)S(0.0)PS(0.0)PLS(0.0)GS(0.0)ALCGGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TAF6 79746 1 3 2409.1 84.76 HUMAN 1 -0.8751 20.2119 GGPTTPLSPTRLSRL-p P20700;S23-p GGPTTPLSPTRLSRL 0.92648668397199 0.00391022233903977 -0.015 -0.684666666666667 0.654900977482256 35.5193623309221 -0.015 -0.684666666666667 0.86002267585083 0.000280584558645572 -0.184923244458172 -8.28738751470299 P20700 LMNB1 P20700.S23.p_LMNB1 P20700_S23s _1_1_23_23 P20700 P20700|E9PBF6|A0A0D9SFE5 Lamin-B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9845.9845.2 11.89 11.89 1.497 4 1 1 0 732.3757 1383.7793 S23s TMT10 15 (R) AGGPTTPLsPTR (L) AGGPT(0.0)T(0.0)PLS(0.99)PT(0.0)R s:Phosphorylated S LMNB1 66692.5 8 3 440.1 312.01 HUMAN 1 -0.6549 -35.5194 GGQESQPSPLALLAA-p P08047;S59-p GGQESQPSPLALLAA 0.513028313007953 0.079032120498579 0.121333333333333 0.246333333333333 5.35778396104872 14.6290242928949 0.121333333333333 0.246333333333333 0.291220272488869 0.0344427302784602 1.16923848785022 2.80738298444348 P08047 SP1 P08047.S59.p_SP1 P08047_S59s _1_1_59_59 P08047 P08047|P08047-2 Transcription factor Sp1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24138.24349.3 27.69 27.69 6.506 13 1 1 0 1078.8324 3154.512 S59s TMT10 40 (R) SSSTGSSSSTGGGGQESQPsPLALLAATCSR (I) S(0.0)S(0.0)S(0.0)T(0.0)GS(0.0)S(0.0)S(0.0)S(0.0)T(0.0)GGGGQES(0.0)QPS(0.99)PLALLAAT(0.0)CS(0.0)R C:Carbamidomethylation,s:Phosphorylated S SP1 81319.2 2 5 1269.1 160.02 HUMAN 1 5.3578 14.629 GGQSSTASAGPPS__-p Q9H3Y8;S109-p GGQSSTASAGPPS__ 0.172085331934216 0.128121562300179 0.223333333333333 0.172 15.214866714438 11.7672492496531 0.223333333333333 0.172 0.0300963153345335 0.0665694662831466 2.91884759592546 2.29000124078701 Q9H3Y8 PPDPF Q9H3Y8.S109.p_PPDPF Q9H3Y8_S109s _1_1_109_109 Q9H3Y8 X6R7I6|Q9H3Y8 Pancreatic progenitor cell differentiation and proliferation factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6544.6544.2 13.3 13.3 2.249 5 1 1 0 998.0016 1915.0285 S109s TMT10 99 (R) KQPGGQSSTAsAGPPS (-) KQPGGQS(0.0)S(0.0)T(0.0)AS(0.99)AGPPS(0.0) K:TMT10,s:Phosphorylated S PPDPF 11948 4 2 3152.1 59.15 HUMAN 1 15.2149 11.7672 GGRARSWSPPPEVSR-p Q9NR19-2;S30-p GGRARSWSPPPEVSR 0.743083009255858 0.0827104739026718 0.0566666666666667 0.192333333333333 2.45052791969562 14.3387259466557 0.0566666666666667 0.192333333333333 0.568783786420668 0.0368236984398345 0.606414567501126 2.75362353224441 Q9NR19 ACSS2 Q9NR19.2.S30.p_ACSS2 Q9NR19-2_S30s _1_1_30_30 Q9NR19-2 Q9NR19-2|B4DEH9|F8WCJ4 Isoform 2 of Acetyl-coenzyme A synthetase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14442.15067.2 14.32 10.91 1.941 3 1 1 0 725.8504 1370.7266 S30s TMT10 28 (R) SWsPPPEVSR (S) S(0.0)WS(0.99)PPPEVS(0.0)R s:Phosphorylated S ACSS2 81170 9 2 3144.1 59.44 HUMAN 1 2.4505 14.3387 GGRDLYRSGYGFNEP-p Q5BKZ1;S91-p GGRDLYRSGYGFNEP 0.678157712004616 0.14132522319179 -0.128666666666667 -0.164 3.15676495327349 11.1969070735639 -0.128666666666667 -0.164 0.48341876516108 0.0759118005633372 -0.752077077583321 -2.18963467307272 Q5BKZ1 ZNF326 Q5BKZ1.S91.p_ZNF326 Q5BKZ1_S91s _1_1_91_91 Q5BKZ1 Q5BKZ1 DBIRD complex subunit ZNF326 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13417.13417.3 14.42 14.42 1.363 4 1 1 0 743.0056 2147.0355 S91s TMT10 87 (R) DLYRsGYGFNEPEQSR (F) DLY(0.0)RS(0.99)GY(0.0)GFNEPEQS(0.0)R s:Phosphorylated S ZNF326 65995 1 3 1326.1 153.85 HUMAN 1 -3.1568 -11.1969 GGREFTGSPPSSATK-p Q92609-2;S576-p GGREFTGSPPSSATK 0.0241132206334896 0.00360332108061802 -0.723666666666667 -0.684666666666667 37.5435384413568 36.3505753817342 -0.723666666666667 -0.684666666666667 0.000176054105011257 0.000231708764670592 -9.09886150817507 -8.60495384465532 Q92609 TBC1D5 Q92609.2.S576.p_TBC1D5 Q92609-2_S576s _1_1_576_576 Q92609-2 Q92609-2|C9J3F6 Isoform 2 of TBC1 domain family member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11449.11449.2 16.83 12.22 2.197 5 1 1 0 1052.5688 2024.1631 S576s TMT10 572 (R) EFTGsPPSSATKK (D) EFT(0.0)GS(0.99)PPS(0.0)S(0.0)AT(0.0)KK K:TMT10,s:Phosphorylated S TBC1D5 91784.7 14 6 328.1 359.68 HUMAN 1 -37.5435 -36.3506 GGREGFESDTDSEFT-p Q8WWI1-3;S276-p GGREGFESDTDSEFT 0.365482939903865 0.253519229331394 0.146333333333333 0.154666666666667 8.1184202293799 7.84994398072673 0.146333333333333 0.154666666666667 0.154226135717589 0.1640610935163 1.65569731857204 1.60861885826549 Q8WWI1 LMO7 Q8WWI1.3.S276.p_LMO7 Q8WWI1-3_S276s _1_1_276_276 Q8WWI1-3 Q8WWI1|Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23937.23937.2 11.48 11.48 1.303 4 1 1 0 1088.9874 2097.0065 S276s TMT10 272 (R) EGFEsDTDSEFTFK (M) EGFES(0.99)DT(0.0)DS(0.0)EFT(0.0)FK K:TMT10,s:Phosphorylated S LMO7 154694.3 9 5 61.1 704.74 HUMAN 1 8.1184 7.8499 GGREKEESPQPRRKR-p F5H7W8;S169-p GGREKEESPQPRRKR 0.560108690015517 0.626525861028005 0.154666666666667 0.152 4.6446230111994 2.76150926580717 0.154666666666667 0.152 0.343192429280896 0.529479406546078 1.03851139829521 0.671451382095752 F5H7W8 C12orf43 F5H7W8.S169.p_C12orf43 F5H7W8_S169s _1_1_169_169 F5H7W8 F5H7W8|Q96C57|E7ENF1 Chromosome 12 open reading frame 43, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26593.26799.5 15.52 15.52 3.415 3 1 1 0 741.1818 3621.9066 S169s TMT10 146 (K) VALEDDGFRLFFTSVPGGREKEEsPQPR (R) VALEDDGFRLFFT(0.0)S(0.0)VPGGREKEES(0.99)PQPR K:TMT10,s:Phosphorylated S C12orf43 31921.4 12 3 1296.1 156.8 HUMAN 1 4.6446 2.7615 GGRGAGATLEHQQEI-p Q9Y5S2;T676-p GGRGAGATLEHQQEI 0.244944374892467 0.435986747030589 0.209333333333333 0.127 11.6818301126214 4.80285198102522 0.209333333333333 0.127 0.0678917477179894 0.330913741410124 2.27602393858641 1.06759408874861 Q9Y5S2 CDC42BPB Q9Y5S2.T676.p_CDC42BPB Q9Y5S2_T676t _1_1_676_676 Q9Y5S2 Q9Y5S2 Serine/threonine-protein kinase MRCK beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9778.9778.3 13.77 13.77 13.773 2 1 1 0 669.6829 1927.0649 T676t TMT10 672 (R) GAGAtLEHQQEISK (I) GAGAT(0.99)LEHQQEIS(0.0)K K:TMT10,t:Phosphorylated T CDC42BPB 196308.8 1 2 1601.1 128.56 HUMAN 1 11.6818 4.8029 GGRGDVGSADIQDLE-p Q9Y5M8;S257-p GGRGDVGSADIQDLE 0.675922624629322 0.133959524553788 0.065 -0.191 3.18812089396417 11.5074288554072 0.065 -0.191 0.479941064691859 0.0706735837781809 0.758369500513639 -2.2441921495779 Q9Y5M8 SRPRB Q9Y5M8.S257.p_SRPRB Q9Y5M8_S257s _1_1_257_257 Q9Y5M8 Q9Y5M8 Signal recognition particle receptor subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14138.14138.3 14.66 9.5 99 1 1 1 0 719.0316 2075.1133 S257s TMT10 250 (K) GGRGDVGsADIQDLEK (W) GGRGDVGS(1.0)ADIQDLEK K:TMT10,s:Phosphorylated S SRPRB 29929.9 1 2 4506.1 30.6 HUMAN 1 3.1881 -11.5074 GGRGKGAYQDRDKPA-p P50991;Y24-p GGRGKGAYQDRDKPA 0.46084376761032 0.217906969082404 0.144666666666667 0.263333333333333 6.20360928739429 8.7078488339486 0.144666666666667 0.263333333333333 0.239684015119898 0.1346527156506 1.3207549466405 1.75718127432638 P50991 CCT4 P50991.Y24.p_CCT4 P50991_Y24y _1_1_24_24 P50991 P50991|P50991-2 T-complex protein 1 subunit delta GG20160819_MSz_CCLE_T4D7_pY_Injection_01.7248.7248.3 7.22 2.12 99 1 1 1 0 686.0277 1976.1078 Y24y TMT10 22 (K) GAyQDRDKPAQIR (F) GAY(1.0)QDRDKPAQIR K:TMT10,y:Phosphorylated Y CCT4 58436.7 2 1 443.1 7.22 HUMAN 1 6.2036 8.7078 GGRGRSLSGLLPAQT-p Q8NBF2;S12-p GGRGRSLSGLLPAQT 0.370513669313783 0.768331096330194 -0.181333333333333 0.035 7.99528102141182 1.58267484660045 -0.181333333333333 0.035 0.158661624954567 0.694596379607175 -1.63434197875372 0.414217402662109 Q8NBF2 NHLRC2 Q8NBF2.S12.p_NHLRC2 Q8NBF2_S12s _1_1_12_12 Q8NBF2 Q8NBF2 NHL repeat-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37683.37683.3 14.36 14.36 1.175 6 1 1 0 995.5201 2904.5767 S12s Hydrogen 10 (R) SLsGLLPAQTSLEYALLDAVTQQEK (D) S(0.0)LS(0.99)GLLPAQT(0.0)S(0.0)LEY(0.0)ALLDAVT(0.0)QQEK K:TMT10-Lys-Only,s:Phosphorylated S NHLRC2 80297.9 3 1 2930.1 65.69 HUMAN 1 -7.9953 1.5827 GGRGSPVSPRRHQKG-p Q14676;S998-p GGRGSPVSPRRHQKG 0.622172474425454 0.00107456139719538 -0.0736666666666667 -1.17166666666667 3.83164429558755 50.2209777836257 -0.0736666666666667 -1.17166666666667 0.413842958809037 9.50390795732126e-06 -0.884808320786569 -15.8429600483926 Q14676 MDC1 Q14676.S998.p_MDC1 Q14676_S998s _1_1_998_998 Q14676 Q14676|Q14676-3 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5425.5425.2 8.47 1.54 3.342 2 1 1 0 504.7577 928.5413 S998s TMT10 994 (R) GSPVsPR (R) GS(0.0)PVS(0.99)PR s:Phosphorylated S MDC1 227803.2 2 26 6.1 1662.62 HUMAN 1 -3.8316 -50.221 GGRHLDRSPESDRPR-p Q96T37;S656-p GGRHLDRSPESDRPR 0.233628206047255 0.00476719426519808 -0.504333333333333 0.629 12.1188374472617 33.938291831123 -0.504333333333333 0.629 0.0613926323672094 0.00040380418616905 -2.35343090717063 7.71142224570717 Q96T37 RBM15 Q96T37.S656.p_RBM15 Q96T37_S656s _1_1_656_656 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3477.3477.5 14.89 14.89 2.975 2 1 1 0 427.0294 2051.151 S656s TMT10 652 (R) HLDRsPESDRPRK (R) HLDRS(0.99)PES(0.0)DRPRK K:TMT10,s:Phosphorylated S RBM15 107414.9 7 19 55.1 724.11 HUMAN 1 -12.1188 33.9383 GGRLRKLSLGQYDND-p Q68CZ2;S776-p GGRLRKLSLGQYDND 0.1560557092084 0.900820247661243 -0.294333333333333 -0.0166666666666667 16.2005503623214 0.634831563786233 -0.294333333333333 -0.0166666666666666 0.023985289447211 0.864006169538835 -3.1067933553206 -0.179575417751124 Q68CZ2 TNS3 Q68CZ2.S776.p_TNS3 Q68CZ2_S776s _1_1_776_776 Q68CZ2 Q68CZ2|Q68CZ2-2 Tensin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23994.23994.4 23.32 19.34 8.797 3 1 1 0 702.126 2725.5128 S776s TMT10 774 (R) KLsLGQYDNDAGGQLPFSK (C) KLS(0.99)LGQY(0.0)DNDAGGQLPFS(0.0)K K:TMT10,s:Phosphorylated S TNS3 156460.9 12 9 183.1 477.16 HUMAN 1 -16.2006 -0.6348 GGRSSGPYGGGGQYF-p P09651;Y341-p GGRSSGPYGGGGQYF 0.88795343560342 0.301368477994011 -0.029 0.194666666666667 1.00405885366638 6.87634682990161 -0.029 0.194666666666667 0.793586213793702 0.205288828797365 -0.274896238476887 1.43896001059902 P09651 HNRNPA1 P09651.Y341.p_HNRNPA1 P09651_Y341y _1_1_341_341 P09651 P09651|P09651-2|Q32P51|F8W6I7|P09651-3 Heterogeneous nuclear ribonucleoprotein A1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16020.16064.3 23.54 20.51 2.232 4 1 1 0 638.6457 1833.9536 Y341y TMT10 337 (R) SSGPyGGGGQYFAK (P) S(0.0)S(0.0)GPY(0.99)GGGGQY(0.0)FAK K:TMT10,y:Phosphorylated Y HNRNPA1 38860.1 6 2 7.1 110.22 HUMAN 1 -1.0041 6.8763 GGRSVRFSEAEQRCV-p P33993;S678-p GGRSVRFSEAEQRCV 0.036620375860581 0.00120235374474026 -0.602333333333333 -1.06466666666667 32.9202231083005 48.0515909953462 -0.602333333333333 -1.06466666666667 0.000510478774687693 1.56617721130176e-05 -7.37221736756903 -14.421335658612 P33993 MCM7 P33993.S678.p_MCM7 P33993_S678s _1_1_678_678 P33993 P33993|P33993-3|P33993-2 DNA replication licensing factor MCM7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8493.8493.3 11.03 11.03 4.444 2 1 1 0 506.5821 1437.7648 S678s TMT10 674 (R) SVRFsEAEQR (C) S(0.0)VRFS(0.99)EAEQR s:Phosphorylated S MCM7 81934.1 1 9 1064.1 181.73 HUMAN 1 -32.9202 -48.0516 GGRSVVCSDVEQQVI-p A0A0C4DG89;S591-p GGRSVVCSDVEQQVI 0.249013894617825 0.293224580729982 0.198666666666667 0.145333333333333 11.5219991843428 7.03311024246093 0.198666666666667 0.145333333333333 0.0704368752817645 0.198010844384755 2.2478259723666 1.46640069415971 A0A0C4DG89 DDX46 A0A0C4DG89.S591.p_DDX46 A0A0C4DG89_S591s _1_1_591_591 A0A0C4DG89 A0A0C4DG89|Q7L014 Probable ATP-dependent RNA helicase DDX46 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26657.26657.4 16.13 14.1 2.477 2 1 1 0 747.151 2905.6159 S591s TMT10 587 (R) SVVCsDVEQQVIVIEEEKK (F) S(0.0)VVCS(0.99)DVEQQVIVIEEEKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DDX46 117972.6 1 4 985.1 191.96 HUMAN 1 11.522 7.0331 GGSDEEETGSPSEDG-p Q13610;T55-p GGSDEEETGSPSEDG 0.317722808999546 0.714457930300217 0.274333333333333 0.0543333333333333 9.32485814616171 2.01017664110244 0.274333333333333 0.0543333333333333 0.116819188595206 0.629480579399305 1.86461326638789 0.510995112766801 Q13610 PWP1 Q13610.T55.p_PWP1 Q13610_T55tS57sS59s_3_3_55_59 Q13610 Q13610|Q13610-2 Periodic tryptophan protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12955.12955.3 12.68 12.68 1.187 5 3 3 0 1179.8038 3297.5065 T55t S57s S59s TMT10 41 (K) EKLQEEGGGSDEEEtGsPsEDGMQSAR (T) EKLQEEGGGS(0.0)DEEET(0.99)GS(0.99)PS(0.99)EDGMQS(0.0)AR K:TMT10,t:Phosphorylated T,s:Phosphorylated S PWP1 56397.4 3 7 2267.1 90.54 HUMAN 1 9.3249 2.0102 GGSDGYGSGRGFGDG-p P22626;S236-p GGSDGYGSGRGFGDG 0.145152146047681 0.468293932731722 0.302 0.0806666666666667 17.0873611361404 4.39229969657785 0.302 0.0806666666666667 0.0195552731404059 0.363722385135976 3.27986117709081 0.99123354884801 P22626 HNRNPA2B1 P22626.S236.p_HNRNPA2B1 P22626_S236s _1_1_236_236 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14901.14901.4 24.28 24.28 2.671 7 1 1 0 925.139 3617.5652 S236s TMT10 229 (R) GGSDGYGsGRGFGDGYNGYGGGPGGGNFGGSPGYGGGR (G) GGS(0.0)DGY(0.0)GS(0.99)GRGFGDGY(0.0)NGY(0.0)GGGPGGGNFGGS(0.0)PGY(0.0)GGGR s:Phosphorylated S HNRNPA2B1 37486.1 3 12 299.1 378.08 HUMAN 1 17.0874 4.3923 GGSDKLASPMKPVPG-p Q15648;S1207-p GGSDKLASPMKPVPG 0.0332552830156115 0.0117297467150433 -0.645333333333333 -0.475333333333333 34.5597782100324 26.9887510902243 -0.645333333333334 -0.475333333333333 0.000349963038843999 0.00200043705681665 -7.94870566069625 -5.55808313236339 Q15648 MED1 Q15648.S1207.p_MED1 Q15648_S1207s _1_1_1207_1207 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17014.17014.3 17.98 17.98 5.582 4 1 1 0 787.7797 2281.3557 S1207s TMT10 1205 (K) LAsPMKPVPGTPPSSK (A) LAS(0.99)PMKPVPGT(0.0)PPS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S MED1 169445 5 16 115.1 566.87 HUMAN 1 -34.5598 -26.9888 GGSDNYGSLSRVTRI-p O60716-3;S230-p GGSDNYGSLSRVTRI 0.515467060998099 0.476776888726517 0.0996666666666667 0.0713333333333333 5.31582437907539 4.29025648158288 0.0996666666666667 0.0713333333333333 0.294047547884002 0.372369714542035 1.16163249524404 0.972047947561907 O60716 CTNND1 O60716.3.S230.p_CTNND1 O60716-3_S230s _1_1_230_230 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-19|O60716-21|O60716-23|O60716-24 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10107.10107.4 17.86 15.51 1.375 6 1 1 0 571.4947 2202.989 S230s TMT10 216 (R) HYEDGYPGGSDNYGsLSR (V) HY(0.0)EDGY(0.0)PGGS(0.0)DNY(0.0)GS(0.99)LS(0.0)R s:Phosphorylated S CTNND1 105545.3 6 14 21.1 1014.17 HUMAN 1 5.3158 4.2903 GGSFGGRSSGSPYGG-p P51991;S355-p GGSFGGRSSGSPYGG 0.396926015285751 0.363676787782655 0.128666666666667 0.109 7.40569238038634 5.82466025775481 0.128666666666667 0.109 0.181731730450612 0.261537503711389 1.53185714122923 1.25297460777233 P51991 HNRNPA3 P51991.S355.p_HNRNPA3 P51991_S355s _1_1_355_355 P51991 P51991|P51991-2 Heterogeneous nuclear ribonucleoprotein A3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9404.9404.3 15.95 7.2 1.78 10 1 1 0 946.7404 2758.2403 S355s TMT10 348 (K) GGSFGGRsSGSPYGGGYGSGGGSGGYGSR (R) GGS(0.0)FGGRS(0.99)S(0.0)GS(0.0)PY(0.0)GGGY(0.0)GS(0.0)GGGS(0.0)GGY(0.0)GS(0.0)R s:Phosphorylated S HNRNPA3 39822.5 19 3 2139.1 96.03 HUMAN 1 7.4057 5.8247 GGSGGGGSGGGRGAG-p Q9UHB9;S27-p GGSGGGGSGGGRGAG 0.244699674666454 0.0216446577470994 0.201333333333333 -0.365666666666667 11.6930078775785 22.7615539269191 0.201333333333333 -0.365666666666667 0.0677172342768558 0.00529473961619087 2.2779981330695 -4.49331902101764 Q9UHB9 SRP68 Q9UHB9.S27.p_SRP68 Q9UHB9_S27s _1_1_27_27 Q9UHB9 Q9UHB9|Q9UHB9-2|Q9UHB9-4|K7EQC2|K7EN53 Signal recognition particle subunit SRP68 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4294.4294.3 25.76 25.76 2.162 3 1 1 0 718.3149 2072.9655 S27s TMT10 6 (K) QVPGGGGGGGSGGGGGSGGGGsGGGR (G) QVPGGGGGGGS(0.0)GGGGGS(0.0)GGGGS(0.99)GGGR s:Phosphorylated S SRP68 71241.8 1 2 2177.1 94.49 HUMAN 1 11.693 -22.7616 GGSGGGGYNNSKHRW-p Q5T1Z8;Y139-p GGSGGGGYNNSKHRW 0.154754532748189 0.621440583947784 -0.272333333333333 -0.0533333333333333 16.2754680811261 2.80932505050971 -0.272333333333333 -0.0533333333333333 0.0235750809084188 0.523681817152552 -3.12126330862415 -0.681318444240759 Q5T1Z8 NotFound Q5T1Z8.Y139.p_NotFound Q5T1Z8_Y139y_1_1_139_139 Q5T1Z8 Q5T1Z8|Q5T1Z4|Q14671-3|Q14671-2|Q14671-4|E9PR38|E9PMX1 Pumilio homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5682.5682.4 9.79 9.79 1.069 3 1 1 0 600.7842 2319.1478 Y139y N140n TMT10 124 (R) QHGEQLGGGGSGGGGynNSK (H) QHGEQLGGGGS(0.0)GGGGY(0.99)N(0.50)N(0.50)S(0.0)K K:TMT10,y:Phosphorylated Y,n:Deamidated PUM1 130847.9 2 4 720.1 237.18 HUMAN 1 -16.2755 -2.8093 GGSGSGPTIEEVD__-p A0A0G2JIW1;T637-p GGSGSGPTIEEVD__ 0.560135693219576 0.992051198880387 -0.089 -0.00133333333333333 4.64393077475768 0.0507746506062916 -0.089 -0.00133333333333333 0.343247136225271 0.988376782271275 -1.03838285454944 -0.0152518063192181 A0A0G2JIW1 NotFound A0A0G2JIW1.T637.p_NotFound A0A0G2JIW1_T637t _1_1_637_637 A0A0G2JIW1 A0A0G2JIW1|P0DMV8|P0DMV8-2|V9GZ37 Heat shock 70 kDa protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32828.32828.4 23.83 18.94 1.377 5 1 1 0 1195.5867 4699.335 T637t TMT10 599 (K) ELEQVCNPIISGLYQGAGGPGPGGFGAQGPKGGSGSGPtIEEVD (-) ELEQVCNPIIS(0.0)GLY(0.0)QGAGGPGPGGFGAQGPKGGS(0.0)GS(0.0)GPT(0.99)IEEVD C:Carbamidomethylation,K:TMT10,t:Phosphorylated T HSPA1B 70393.3 2 8 367.3 341.38 HUMAN 1 -4.6439 -0.0508 GGSKRMLSPASSLEL-p P31629;S1443-p GGSKRMLSPASSLEL 0.717981357868075 0.0601304903122367 -0.0596666666666667 0.233666666666667 2.71508421336504 16.2643899000134 -0.0596666666666667 0.233666666666667 0.535169776277082 0.0236352940613041 -0.661923781818174 3.11687429132479 P31629 HIVEP2 P31629.S1443.p_HIVEP2 P31629_S1443s _1_1_1443_1443 P31629 P31629 Transcription factor HIVEP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33055.33055.3 14.4 14.4 1.112 4 1 1 0 793.4139 2298.2602 S1443s TMT10 1440 (K) RMLsPASSLELFMETK (Q) RMLS(0.99)PAS(0.0)S(0.0)LELFMET(0.0)K K:TMT10,s:Phosphorylated S HIVEP2 271273.5 4 10 465.2 303.46 HUMAN 1 -2.7151 16.2644 GGSLFAYSPGGAHGM-p Q99856;S362-p GGSLFAYSPGGAHGM 0.32809450446442 0.0394427944085345 0.14 0.253 9.05036837685894 18.836913058154 0.14 0.253 0.124440905414634 0.0130709963741795 1.81708237491135 3.6305176982656 Q99856 ARID3A Q99856.S362.p_ARID3A Q99856_S362s _1_1_362_362 Q99856 Q99856 AT-rich interactive domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21510.21510.4 22.51 22.51 6.918 6 1 1 0 745.1246 2897.5133 S362s TMT10 351 (R) RQSFGGSLFAYsPGGAHGMLSSPK (L) RQS(0.0)FGGS(0.0)LFAY(0.0)S(0.99)PGGAHGMLS(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S ARID3A 62944.9 1 5 2804.1 70.06 HUMAN 1 9.0504 18.8369 GGSQYSGSLESSIPV-p Q4KMP7;S318-p GGSQYSGSLESSIPV 0.354124954874279 0.170878120852824 -0.141333333333333 -0.153666666666667 8.37888626582743 10.0880253586559 -0.141333333333333 -0.153666666666667 0.145248405467534 0.0979935439190491 -1.70083196756773 -1.99619245023186 Q4KMP7 TBC1D10B Q4KMP7.S318.p_TBC1D10B Q4KMP7_S318s _1_1_318_318 Q4KMP7 Q4KMP7 TBC1 domain family member 10B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29200.29200.3 24.18 24.18 1.103 7 1 1 0 900.105 2618.33 S318s TMT10 307 (K) YGFLGGSQYSGsLESSIPVDVAR (Q) Y(0.0)GFLGGS(0.0)QY(0.0)S(0.0)GS(0.99)LES(0.0)S(0.0)IPVDVAR s:Phosphorylated S TBC1D10B 87710.7 3 6 462.1 304.34 HUMAN 1 -8.3789 -10.088 GGSSGTETLEKKKKN-p Q6GQQ9;T547-p GGSSGTETLEKKKKN 0.442576911802471 0.0394778082910222 -0.155666666666667 -0.483333333333333 6.52215585551483 18.8281537366159 -0.155666666666667 -0.483333333333333 0.222732921949337 0.0130973859792762 -1.37708154292143 -3.62870576887008 Q6GQQ9 OTUD7B Q6GQQ9.T547.p_OTUD7B Q6GQQ9_T547t _1_1_547_547 Q6GQQ9 Q6GQQ9|Q6GQQ9-2 OTU domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13726.13726.3 19.75 19.75 1.24 6 1 1 0 915.158 2663.4819 T547t TMT10 529 (K) GSKPGGVGTGLGGSSGTEtLEK (K) GS(0.0)KPGGVGT(0.0)GLGGS(0.0)S(0.0)GT(0.0)ET(0.99)LEK K:TMT10,t:Phosphorylated T OTUD7B 93208.9 1 7 1645.1 123.96 HUMAN 1 -6.5222 -18.8282 GGSSKAPSRSGSRDS-p P25054;S2300-p GGSSKAPSRSGSRDS 0.586785130847487 0.0178902822060658 0.119333333333333 -0.548666666666667 4.25976151795422 24.0632135236589 0.119333333333333 -0.548666666666667 0.374993593523457 0.0039235450871035 0.966468869746543 -4.80465760950833 P25054 APC P25054.S2300.p_APC P25054_S2300s _1_1_2300_2300 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5881.5881.3 11.02 11.02 3.739 5 1 1 0 648.0101 1862.0496 S2300s TMT10 2288 (R) QTSQIGGSSKAPsR (S) QT(0.0)S(0.0)QIGGS(0.0)S(0.0)KAPS(0.99)R K:TMT10,s:Phosphorylated S APC 313808.5 2 33 33.1 890.71 HUMAN 1 4.2598 -24.0632 GGSSRGNSRPGTPSA-p P35269;S385-p GGSSRGNSRPGTPSA 0.484480989227411 0.00597222524199746 0.217666666666667 0.678333333333333 5.79669770971256 32.1172677327008 0.217666666666667 0.678333333333333 0.263226875680023 0.000614148261391474 1.24826099873733 7.09078632613746 P35269 GTF2F1 P35269.S385.p_GTF2F1 P35269_S385s _1_1_385_385 P35269 P35269 General transcription factor IIF subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4732.4732.2 15.87 15.87 3.851 8 1 1 0 999.9484 1918.9213 S385s Hydrogen 383 (R) GNsRPGTPSAEGGSTSSTLR (A) GNS(0.99)RPGT(0.0)PS(0.0)AEGGS(0.0)T(0.0)S(0.0)S(0.0)T(0.0)LR s:Phosphorylated S GTF2F1 58296.5 3 6 1159.1 171.17 HUMAN 1 5.7967 32.1173 GGSTRGGSLLAGGGG-p P19012;S22-p GGSTRGGSLLAGGGG 0.344054367208623 0.896916293211812 -0.151666666666667 0.013 8.60581653741297 0.662909877108004 -0.151666666666667 0.013 0.1378536743447 0.858438154635934 -1.7401277199802 0.187027737093072 P19012 KRT15 P19012.S22.p_KRT15 P19012_S22s _1_1_22_22 P19012 P19012 Keratin, type I cytoskeletal 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19903.19903.3 12.3 12.3 12.302 4 1 1 0 711.0107 2051.0467 S22s TMT10 20 (R) GGsLLAGGGGFGGGSLSGGGGSR (S) GGS(0.99)LLAGGGGFGGGS(0.0)LS(0.0)GGGGS(0.0)R s:Phosphorylated S KRT15 49439.1 1 27 383.2 334.07 HUMAN 1 -8.6058 0.6629 GGTGRRISLSDMPRS-p Q9ULU4-19;S452-p GGTGRRISLSDMPRS 0.471088586183421 0.706954151285432 0.116333333333333 0.052 6.03370968793615 2.06920994852904 0.116333333333333 0.052 0.249246478583647 0.620981990561196 1.29056647963432 0.524013483226446 Q9ULU4 ZMYND8 Q9ULU4.19.S452.p_ZMYND8 Q9ULU4-19_S452s _1_1_452_452 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-10|Q9ULU4-13|Q9ULU4-20|Q9ULU4-5|Q9ULU4-9|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-18|Q9ULU4-21|Q9ULU4-8|Q9ULU4-23|Q9ULU4-15|A0A087WYS3|Q9ULU4-17|Q9ULU4-6|Q9ULU4-3|A0A087WV57|Q9ULU4-4 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15031.15031.3 10.92 10.92 2.325 2 1 1 0 461.9057 1303.7354 S452s TMT10 450 (R) RIsLSDMPR (S) RIS(0.99)LS(0.0)DMPR s:Phosphorylated S ZMYND8 139738.7 4 4 57.1 712.18 HUMAN 1 6.0337 2.0692 GGTGRSLSSPNCFGP-p Q5T0Z8;S1087-p GGTGRSLSSPNCFGP 0.661609835861846 0.172572522693163 0.075 0.154333333333333 3.35965776182282 10.0306749713263 0.075 0.154333333333333 0.46135392931811 0.0992961712412362 0.792562297140218 1.98623426857595 Q5T0Z8 C6orf132 Q5T0Z8.S1087.p_C6orf132 Q5T0Z8_S1087s _1_1_1087_1087 Q5T0Z8 Q5T0Z8 Uncharacterized protein C6orf132 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17219.17219.2 14.22 14.22 1.243 3 1 1 0 1114.0048 2147.0211 S1087s TMT10 1085 (R) SLsSPNCFGPQPGGPEMR (R) S(0.0)LS(0.99)S(0.0)PNCFGPQPGGPEMR C:Carbamidomethylation,s:Phosphorylated S C6orf132 124488.2 2 18 336.1 355.09 HUMAN 1 3.3597 10.0307 GGTLAFVSPSLAVHK-p Q86YP4-3;S599-p GGTLAFVSPSLAVHK 0.792593719033847 0.0299657384503019 -0.044 -0.668333333333333 1.94820875967259 20.616603263599 -0.044 -0.668333333333333 0.638526791194109 0.0086764021568774 -0.497301704333897 -4.0086479536944 Q86YP4 GATAD2A Q86YP4.3.S599.p_GATAD2A Q86YP4-3_S599s _1_1_599_599 Q86YP4-3 Q86YP4-3 Isoform 3 of Transcriptional repressor p66-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26011.26011.4 16.91 16.91 1.98 6 1 1 0 631.1022 2441.4168 S599s TMT10 587 (K) TPLSTGGTLAFVsPSLAVHK (S) T(0.0)PLS(0.0)T(0.0)GGT(0.0)LAFVS(0.99)PS(0.0)LAVHK K:TMT10,s:Phosphorylated S GATAD2A 68475 1 13 1046.1 184.48 HUMAN 1 -1.9482 -20.6166 GGTLAKGSLENVLDS-p P40818;S153-p GGTLAKGSLENVLDS 0.87144156919648 0.0527730353891141 0.029 0.426666666666667 1.1701079657095 17.0432245517363 0.029 0.426666666666667 0.763816794838326 0.0197550232354689 0.316020271672786 3.26865450020479 P40818 USP8 P40818.S153.p_USP8 P40818_S153s _1_1_153_153 P40818 P40818|P40818-2|A0A075B720 Ubiquitin carboxyl-terminal hydrolase 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16184.16184.5 11.01 7.4 1.133 4 1 1 0 666.3564 3247.7849 S153s TMT10 138 (K) RQETGREDGGTLAKGsLENVLDSK (D) RQET(0.0)GREDGGT(0.0)LAKGS(0.99)LENVLDS(0.0)K K:TMT10,s:Phosphorylated S USP8 128490.8 2 2 788.1 224.97 HUMAN 1 1.1701 17.0432 GGTLGPPSPPGAPSP-p Q06587;S248-p GGTLGPPSPPGAPSP 0.791634956034985 0.23846297881222 0.0483333333333333 0.174 1.95886303585332 8.20101849384962 0.0483333333333333 0.174 0.636962253041596 0.151320633439957 0.499672569318295 1.66947184053509 Q06587 RING1 Q06587.S248.p_RING1 Q06587_S248s _1_1_248_248 Q06587 Q06587|Q06587-2 E3 ubiquitin-protein ligase RING1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30659.30659.5 23.26 19.65 2.215 4 1 1 0 890.681 4369.396 S248s TMT10 236 (R) GGTLGGGTLGPPsPPGAPSPPEPGGEIELVFRPHPLLVEK (G) GGT(0.0)LGGGT(0.0)LGPPS(0.99)PPGAPS(0.0)PPEPGGEIELVFRPHPLLVEK K:TMT10,s:Phosphorylated S RING1 42999.1 3 6 1195.1 167.38 HUMAN 1 1.9589 8.201 GGTPRSLSAIDRAGA-p O95831;S268-p GGTPRSLSAIDRAGA 0.531033712995251 0.102462626469132 0.0943333333333333 0.248666666666667 5.08579197292333 13.0668673524554 0.0943333333333333 0.248666666666667 0.310042194866693 0.04935296677988 1.1197569464445 2.52173097814687 O95831 AIFM1 O95831.S268.p_AIFM1 O95831_S268s _1_1_268_268 O95831 O95831|O95831-3|O95831-4|O95831-6 Apoptosis-inducing factor 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17764.17764.4 13.45 11.36 2.178 2 1 1 0 464.5082 1775.0427 S268s TMT10 266 (R) SLsAIDRAGAEVK (S) S(0.0)LS(0.99)AIDRAGAEVK K:TMT10,s:Phosphorylated S AIFM1 67184.7 5 6 1056.1 182.66 HUMAN 1 5.0858 13.0669 GGTRGPPSRGGHMDD-p P38159;S124-p GGTRGPPSRGGHMDD 0.327394528659194 0.278390901829383 0.162333333333333 0.177333333333333 9.07189229591701 7.31646963059132 0.162333333333333 0.177333333333333 0.123825693907986 0.185503896739318 1.82080864673121 1.51586575592104 P38159 RBMX P38159.S124.p_RBMX P38159_S124s _1_1_124_124 P38159 P38159|Q96E39|P38159-2|H3BT71 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12767.12767.4 16.38 16.38 1.102 6 1 1 0 714.0503 2773.2078 S124s TMT10 121 (R) GPPsRGGHMDDGGYSMNFNMSSSR (G) GPPS(0.99)RGGHMDDGGY(0.0)S(0.0)MNFNMS(0.0)S(0.0)S(0.0)R s:Phosphorylated S RBMX 42331.1 6 7 102.1 595.29 HUMAN 1 9.0719 7.3165 GGTTYEISV______-p Q9C0B5;S714-p GGTTYEISV______ 0.290079611219067 0.0398548575294297 -0.164666666666667 -0.252 10.1299179195715 18.767481127421 -0.164666666666667 -0.252 0.0970528309782659 0.0132816455899516 -2.00429095712158 -3.61616782594044 Q9C0B5 ZDHHC5 Q9C0B5.S714.p_ZDHHC5 Q9C0B5_S714s _1_1_714_714 Q9C0B5 Q9ULC8|Q9C0B5|Q9ULC8-2|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20056.20056.3 13.13 13.13 7.195 5 1 1 0 645.681 1855.0577 S714s TMT10 702 (K) KVSGVGGTTYEIsV (-) KVS(0.0)GVGGT(0.0)T(0.0)Y(0.0)EIS(0.99)V K:TMT10,s:Phosphorylated S ZDHHC5 78285 2 25 134.1 530.74 HUMAN 1 -10.1299 -18.7675 GGTVGVFSPKKTPHL-p O43896;S494-p GGTVGVFSPKKTPHL 0.771638354290043 0.0692060871491598 -0.12 -0.505 2.15755146803518 15.4220127178792 -0.12 -0.505 0.608477961617115 0.028694504401643 -0.543416994276791 -2.95598528752824 O43896 KIF1C O43896.S494.p_KIF1C O43896_S494s _1_1_494_494 O43896 O43896 Kinesin-like protein KIF1C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17197.17197.3 10.52 10.52 7.181 2 1 1 0 577.6307 1650.9103 S494s TMT10 485 (R) EDGGTVGVFsPK (K) EDGGT(0.0)VGVFS(0.99)PK K:TMT10,s:Phosphorylated S KIF1C 123800.2 1 3 954.1 195.97 HUMAN 1 -2.1576 -15.422 GGVAAAISKTAVAPI-p P05141;S22-p GGVAAAISKTAVAPI 0.198279353086935 0.00683089699785343 0.196333333333333 0.463333333333333 13.6985390582447 31.0676737030797 0.196333333333333 0.463333333333333 0.042672304184655 0.000782046595409496 2.63773460446332 6.7524508218732 P05141 SLC25A5 P05141.S22.p_SLC25A5 P05141_S22s _1_1_22_22 P05141 P05141 ADP/ATP translocase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25574.25574.3 20.61 19.74 99 1 1 1 0 586.6586 1677.994 S22s TMT10 11 (K) DFLAGGVAAAIsK (T) DFLAGGVAAAIS(1.0)K K:TMT10,s:Phosphorylated S SLC25A5 33079.8 1 3 2574.1 78.09 HUMAN 1 13.6985 31.0677 GGVASAASPESKPSP-p A0A0J9YWL0;S483-p GGVASAASPESKPSP 0.941250546674147 0.0022667499771214 0.013 -0.725333333333333 0.516906292557625 40.9072555060615 0.013 -0.725333333333333 0.887788204954348 8.1147370104858e-05 0.147884656671547 -10.5470580876891 A0A0J9YWL0 NotFound A0A0J9YWL0.S483.p_NotFound A0A0J9YWL0_S483s _1_1_483_483 A0A0J9YWL0 A0A0J9YWL0|Q9Y4K1 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14379.14892.3 18.04 18.04 2.15 5 1 1 0 922.4938 2685.5026 S483s TMT10 472 (R) AALDGGVASAAsPESKPSPGTK (G) AALDGGVAS(0.0)AAS(0.99)PES(0.0)KPS(0.0)PGT(0.0)K K:TMT10,s:Phosphorylated S CRYBG1 233643.7 2 13 79.1 640.71 HUMAN 1 0.5169 -40.9073 GGVDLDSSGEFASIE-p Q92766;S1175-p GGVDLDSSGEFASIE 0.314605425744953 0.255601482862994 -0.174 -0.118166666666667 9.39598912387393 7.80381931257237 -0.174 -0.118166666666667 0.114921447520109 0.165812805978957 -1.87693536854352 -1.60061474357482 Q92766 RREB1 Q92766.S1175.p_RREB1 Q92766_S1174sS1175s_2_2_1174_1175 Q92766 Q92766-2|Q92766-3|Q92766-5|A0A087X055 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24295.24295.2 17.69 17.69 5.114 4 2 2 0 1251.0648 2341.1924 S1174s S1175s TMT10 1165 (R) ANSGGVDLDssGEFASIEK (M) ANS(0.0)GGVDLDS(0.99)S(0.99)GEFAS(0.0)IEK K:TMT10,s:Phosphorylated S RREB1 184269.8 4 33 179.1 480.48 HUMAN 2 -9.396 -7.8038 GGVISAISEAAAQYN-p A0A0C4DGQ5;S70-p GGVISAISEAAAQYN 0.285328406473615 0.651752865751088 0.256666666666667 -0.056 10.2797701784376 2.53840921770374 0.256666666666667 -0.056 0.0937611622492168 0.55738987852948 2.03036077581438 -0.624910463633478 A0A0C4DGQ5 CAPNS1 A0A0C4DGQ5.S70.p_CAPNS1 A0A0C4DGQ5_S70s _1_1_70_70 A0A0C4DGQ5 A0A0C4DGQ5|K7ELJ7|P04632 Calpain small subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35391.35391.4 24.08 24.08 2.818 3 1 1 0 689.8615 2676.4558 S70s TMT10 61 (R) ILGGVISAIsEAAAQYNPEPPPPR (T) ILGGVIS(0.0)AIS(0.99)EAAAQY(0.0)NPEPPPPR s:Phosphorylated S CAPNS1 34070.7 2 2 4176.1 36.06 HUMAN 1 10.2798 -2.5384 GGVKKPTYDPVSEDQ-p C9J1X3;Y550-p GGVKKPTYDPVSEDQ 0.33286094806896 0.00457805844775887 0.349666666666667 -0.632666666666667 8.91836073366029 34.2404769512017 0.349666666666667 -0.632666666666667 0.128281469613631 0.00037666243086351 1.79423065881888 -7.81875019052878 C9J1X3 TNK2 C9J1X3.Y550.p_TNK2 C9J1X3_Y550y _1_1_550_550 C9J1X3 C9J1X3|Q07912 Activated CDC42 kinase 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.19671.19721.4 21.7 15.49 1.719 5 1 1 0 773.6407 3011.5929 Y550y TMT10 547 (K) KPTyDPVSEDQDPLSSDFKR (L) KPT(0.0)Y(0.99)DPVS(0.0)EDQDPLS(0.0)S(0.0)DFKR K:TMT10,y:Phosphorylated Y TNK2 115861.1 1 3 12.1 93.88 HUMAN 1 8.9184 -34.2405 GGVKRSLSEQPVMDT-p P18615-3;S58-p GGVKRSLSEQPVMDT 0.331242352186695 0.00623118177103645 0.174333333333333 0.551666666666667 8.9647874475056 31.7758615167721 0.174333333333333 0.551666666666667 0.126917425887778 0.000664375866552723 1.8022672672653 6.97923176919896 P18615 NELFE P18615.3.S58.p_NELFE P18615-3_S58s _1_1_58_58 P18615-3 P18615-3|P18615-4 Isoform 2 of Negative elongation factor E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18234.18234.2 18.79 18.79 2.59 5 1 1 0 1223.106 2365.2321 S58s TMT10 56 (R) SLsEQPVMDTATATEQAK (Q) S(0.0)LS(0.99)EQPVMDT(0.0)AT(0.0)AT(0.0)EQAK K:TMT10,s:Phosphorylated S NELFE 44038 8 1 611.1 261.65 HUMAN 1 8.9648 31.7759 GGVTAVGSAVVNKVP-p Q8WUH6;S99-p GGVTAVGSAVVNKVP 0.89536917010512 0.519589992609842 0.0203333333333333 -0.0966666666666666 0.939025675383781 3.82030752664717 0.0203333333333333 -0.0966666666666667 0.805559145330085 0.414924660518579 0.258512941468048 -0.882476940847866 Q8WUH6 TMEM263 Q8WUH6.S99.p_TMEM263 Q8WUH6_S99s _1_1_99_99 Q8WUH6 Q8WUH6 Transmembrane protein 263 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27600.27600.4 16.9 16.04 1.144 4 1 1 0 766.4447 2982.7919 S99s TMT10 85 (K) GGVSAVAGGVTAVGsAVVNKVPLTGK (K) GGVS(0.0)AVAGGVT(0.0)AVGS(0.99)AVVNKVPLT(0.0)GK K:TMT10,s:Phosphorylated S TMEM263 11748.2 1 1 5719.1 16.9 HUMAN 1 0.939 -3.8203 GGVVRDLSMSEEDQM-p Q7Z6Z7;S1368-p GGVVRDLSMSEEDQM 0.224767265517543 0.352590738318364 -0.246333333333333 -0.107 12.4544744660725 6.00157718657911 -0.246333333333333 -0.107 0.0568267152645422 0.251097437886996 -2.41321492980108 -1.28453888947728 Q7Z6Z7 HUWE1 Q7Z6Z7.S1368.p_HUWE1 Q7Z6Z7_S1368s _1_1_1368_1368 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17591.17591.2 14.1 14.1 2.201 2 1 1 0 890.8647 1700.7491 S1368s TMT10 1366 (R) DLsMSEEDQMMR (A) DLS(0.99)MS(0.0)EEDQMMR s:Phosphorylated S HUWE1 485818.9 3 8 11.1 1210.45 HUMAN 1 -12.4545 -6.0016 GGWGRPRSFPRAPTV-p Q9C075;S27-p GGWGRPRSFPRAPTV 0.601379056634462 0.989491048681845 -0.098 -0.00166666666666667 4.07922388255494 0.069259267029701 -0.098 -0.00166666666666667 0.390910748290228 0.984178953077369 -0.932243335394865 -0.020760945799282 Q9C075 KRT23 Q9C075.S27.p_KRT23 Q9C075_S27s _1_1_27_27 Q9C075 Q9C075 Keratin, type I cytoskeletal 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5569.5569.3 14.56 14.56 1.638 2 1 1 0 539.9265 1537.7982 S27s Hydrogen 27 (R) sFPRAPTVHGGAGGAR (I) S(0.99)FPRAPT(0.0)VHGGAGGAR s:Phosphorylated S KRT23 48301.4 3 1 2033.1 101.49 HUMAN 1 -4.0792 -0.0693 GGYIKRITNDAREDE-p O00161;T144-p GGYIKRITNDAREDE 0.0526905433918879 0.0685459349346248 -0.585333333333333 -0.301666666666667 27.7710226655647 15.4854888685741 -0.585333333333333 -0.301666666666667 0.0016706971564838 0.028278157767986 -5.78159329179817 -2.96799654094037 O00161 SNAP23 O00161.T144.p_SNAP23 O00161_T144t _1_1_144_144 O00161 O00161 Synaptosomal-associated protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29679.29679.4 17.3 17.3 9.667 3 1 1 0 871.6948 3403.7892 T144t TMT10 142 (K) RItNDAREDEMEENLTQVGSILGNLK (D) RIT(0.99)NDAREDEMEENLT(0.0)QVGS(0.0)ILGNLK K:TMT10,t:Phosphorylated T SNAP23 23696 1 7 1061.1 182.1 HUMAN 1 -27.771 -15.4855 GHAPAPESPRPGSGS-p Q8IX07;S768-p GHAPAPESPRPGSGS 0.898587001673834 0.0302350363028939 0.0273333333333333 0.319666666666667 0.908300942333954 20.5556167478031 0.0273333333333333 0.319666666666667 0.811278386123385 0.00879910145516405 0.250715828435633 3.99534748829084 Q8IX07 ZFPM1 Q8IX07.S768.p_ZFPM1 Q8IX07_S768s _1_1_768_768 Q8IX07 Q8IX07 Zinc finger protein ZFPM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15139.15139.5 24.29 18.71 1.577 5 1 1 0 817.6176 4004.0728 S768s TMT10 746 (K) LYELHAAGAPPPPPPGHAPAPEsPRPGSGSGSGPGLAPAR (S) LY(0.0)ELHAAGAPPPPPPGHAPAPES(0.99)PRPGS(0.0)GS(0.0)GS(0.0)GPGLAPAR s:Phosphorylated S ZFPM1 106540.7 1 6 961.1 194.31 HUMAN 1 0.9083 20.5556 GHARLALSQNQQSSG-p O95232;S110-p GHARLALSQNQQSSG 0.0571662469334365 0.424851714457429 -0.580333333333333 0.102333333333333 27.1589972505293 4.947957538834 -0.580333333333333 0.102333333333333 0.00192353580589802 0.320039988488657 -5.6121990961838 1.09429313387646 O95232 LUC7L3 O95232.S110.p_LUC7L3 O95232_S110s _1_1_110_110 O95232 J3KPP4|O95232 Luc7-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14512.14512.3 15.87 15.87 3.376 4 1 1 0 751.7265 2173.1977 S110s TMT10 107 (R) LALsQNQQSSGAAGPTGK (N) LALS(0.99)QNQQS(0.0)S(0.0)GAAGPT(0.0)GK K:TMT10,s:Phosphorylated S LUC7L3 51864.7 2 3 1151.1 172.09 HUMAN 1 -27.159 4.948 GHASSPDSEVTSLCQ-p Q6NZY4;S601-p GHASSPDSEVTSLCQ 0.225518171425009 0.0395666397756338 0.19 0.401 12.4259859558237 18.8095889161816 0.19 0.401 0.0572007080164345 0.0131534933141062 2.40812861481184 3.62486702289565 Q6NZY4 ZCCHC8 Q6NZY4.S601.p_ZCCHC8 Q6NZY4_S597sS598sS601s_3_3_597_601 Q6NZY4 Q6NZY4|Q6NZY4-2 Zinc finger CCHC domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14240.14240.3 8.3 8.3 2.537 6 3 3 0 1015.7917 2805.4656 S597s S598s S601s TMT10 590 (K) KSEAGHAssPDsEVTSLCQK (E) KS(0.0)EAGHAS(0.99)S(0.99)PDS(0.99)EVT(0.0)S(0.0)LCQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZCCHC8 79203.5 2 21 443.1 311.3 HUMAN 1 12.426 18.8096 GHDPYRLTPDPYRMS-p P18583-5;T959-p GHDPYRLTPDPYRMS 0.994151823861645 0.703522649556197 -0.00133333333333334 0.0396666666666667 0.0515741134029391 2.09916767430454 -0.00133333333333334 0.0396666666666667 0.9881948555429 0.616713183663562 -0.0154919632058928 0.530590385546131 P18583 SON P18583.5.T959.p_SON P18583-5_T959t _1_1_959_959 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-6 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13863.13863.3 16.31 16.31 3.785 3 1 1 0 670.3329 1929.018 T959t TMT10 951 (R) LGHDPYRLtPDPYR (M) LGHDPY(0.0)RLT(0.99)PDPY(0.0)R t:Phosphorylated T SON 267429.6 5 12 45.1 778.56 HUMAN 1 -0.0516 2.0992 GHEEGRASPLRRGYV-p Q9C0C9;S115-p GHEEGRASPLRRGYV 0.417068657941486 0.0566130482607222 0.182666666666667 -0.245 7.01056808065612 16.6205319366072 0.182666666666667 -0.245 0.19904129651843 0.0217744305641348 1.46286297241127 -3.18590426797766 Q9C0C9 UBE2O Q9C0C9.S115.p_UBE2O Q9C0C9_S87sS89sS115s_3_3_87_115 Q9C0C9 Q9C0C9 (E3-independent) E2 ubiquitin-conjugating enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7731.7731.5 12.06 12.06 2.64 6 3 3 0 899.5729 4253.93 S87s S89s S115s TMT10 81 (R) LIHGEDsDsEGEEEGRGSSGCSEAGGAGHEEGRAsPLRR (G) LIHGEDS(0.99)DS(0.99)EGEEEGRGS(0.0)S(0.0)GCS(0.0)EAGGAGHEEGRAS(0.99)PLRR C:Carbamidomethylation,s:Phosphorylated S UBE2O 142717.3 1 22 308.1 373.27 HUMAN 1 7.0106 -16.6205 GHEFQKVSVDKSFSR-p Q6GYQ0-2;S711-p GHEFQKVSVDKSFSR 0.0970963427309302 0.960478326490656 -0.314 0.00533333333333334 21.479893802366 0.252441233379625 -0.314 0.00533333333333333 0.00711230905105215 0.943530354855048 -4.20399685136966 0.0741756526555882 Q6GYQ0 RALGAPA1 Q6GYQ0.2.S711.p_RALGAPA1 Q6GYQ0-2_S711s _1_1_711_711 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7|Q6GYQ0-4|Q6GYQ0-3 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12779.12779.4 15.66 15.66 99 1 1 1 0 550.0554 2117.2322 S711s TMT10 702 (K) GVGHEFQKVsVDK (S) GVGHEFQKVS(1.0)VDK K:TMT10,s:Phosphorylated S RALGAPA1 236609.9 2 6 317.1 366.49 HUMAN 1 -21.4799 0.2524 GHEYHVLSPKAVPKG-p Q7Z591;S1228-p GHEYHVLSPKAVPKG 0.306383440584975 0.0649865517810917 0.152 0.297 9.62039730860773 15.7966548034411 0.154390876579816 0.297 0.109134049202896 0.0263229476251765 1.9158291633775 3.02713715994064 Q7Z591 AKNA Q7Z591.S1228.p_AKNA Q7Z591_S1228s _1_1_1228_1228 Q7Z591 Q7Z591|Q7Z591-2|Q7Z591-7|Q7Z591-8|Q7Z591-5|Q7Z591-4 AT-hook-containing transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11304.11304.4 17.93 17.93 8.478 4 1 1 0 539.2746 2074.1122 S1228s TMT10 1217 (R) GQYTGHEYHVLsPK (A) GQY(0.0)T(0.0)GHEY(0.0)HVLS(0.99)PK K:TMT10,s:Phosphorylated S AKNA 155935.2 4 15 737.1 234.85 HUMAN 1 9.6204 15.7967 GHGVRRASDPVRTGS-p P10071;S1006-p GHGVRRASDPVRTGS 0.832517303796275 0.0010162099473446 0.0483333333333333 1.204 1.53692901851044 52.0939939987047 0.0483333333333334 1.204 0.701951486635483 6.17448301270595e-06 0.403621137464021 17.1781102002994 P10071 GLI3 P10071.S1006.p_GLI3 P10071_S1006s _1_1_1006_1006 P10071 P10071 Transcriptional activator GLI3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11401.11401.3 13.12 7.6 12.605 3 1 1 0 697.7022 2011.1246 S1006s TMT10 1004 (R) RAsDPVRTGSEGLALPR (V) RAS(0.99)DPVRT(0.0)GS(0.0)EGLALPR s:Phosphorylated S GLI3 171514.7 2 6 1965.1 105.02 HUMAN 1 1.5369 52.094 GHIGRAESDPRLDVL-p Q5VT06;S473-p GHIGRAESDPRLDVL 0.361508209816554 0.34104197116245 0.147 0.217 8.2138229501678 6.1886066555298 0.147 0.217 0.15087514656149 0.240513431408668 1.67223419467057 1.31777077228819 Q5VT06 CEP350 Q5VT06.S473.p_CEP350 Q5VT06_S473s _1_1_473_473 Q5VT06 Q5VT06 Centrosome-associated protein 350 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11025.11025.3 12.42 8.67 99 1 1 1 0 572.9597 1636.8968 S473s TMT10 471 (R) AEsDPRLDVLHR (H) AES(1.0)DPRLDVLHR s:Phosphorylated S CEP350 352521.4 2 2 265.1 395.34 HUMAN 1 8.2138 6.1886 GHKRKLATPPAAQES-p Q9Y4B4;T1260-p GHKRKLATPPAAQES 0.569012171547148 0.0205344648135939 0.079 0.331666666666667 4.50591637806876 23.0927768796773 0.079 0.331666666666667 0.354330357323697 0.00490594089898871 1.01268243961177 4.57124762942079 Q9Y4B4 RAD54L2 Q9Y4B4.T1260.p_RAD54L2 Q9Y4B4_T1260t _1_1_1260_1260 Q9Y4B4 Q9Y4B4 Helicase ARIP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5161.5161.3 11.96 11.96 11.959 3 1 1 0 555.6246 1584.8907 T1260t Hydrogen 1257 (R) KLAtPPAAQESSR (R) KLAT(0.99)PPAAQES(0.0)S(0.0)R K:TMT10-Lys-Only,t:Phosphorylated T RAD54L2 164135.1 4 4 1338.1 152.26 HUMAN 1 4.5059 23.0928 GHLPQAGSLERNRVG-p Q8N4C8;S763-p GHLPQAGSLERNRVG 0.364379130382082 0.150590280120359 0.215333333333333 -0.150666666666667 8.13586887014833 10.8144457002861 0.215333333333333 -0.150666666666667 0.153607744764504 0.0829001716855514 1.6587223265755 -2.122694144267 Q8N4C8 MINK1 Q8N4C8.S763.p_MINK1 Q8N4C8_S763s _1_1_763_763 Q8N4C8 Q8N4C8|Q8N4C8-4|Q8N4C8-3|Q8N4C8-2|Q8N4C8-5 Misshapen-like kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12387.12387.3 17.13 12.8 6.375 4 1 1 0 789.7281 2287.1992 S763s TMT10 747 (R) SDSVLPASHGHLPQAGsLER (N) S(0.0)DS(0.0)VLPAS(0.0)HGHLPQAGS(0.99)LER s:Phosphorylated S MINK1 150503.5 4 21 131.3 535.29 HUMAN 1 8.1359 -10.8144 GHMQQGGSPTPFDRN-p P08237-3;S738-p GHMQQGGSPTPFDRN 0.934979371920407 0.587720087989236 0.013 0.0786666666666667 0.573497910189574 3.11948922473198 0.013 0.0786666666666667 0.876294748379418 0.487585831872547 0.163184251569754 0.744472246145619 P08237 PFKM P08237.3.S738.p_PFKM P08237-3_S738s _1_1_738_738 P08237-3 P08237|P08237-2|P08237-3 Isoform 3 of ATP-dependent 6-phosphofructokinase, muscle type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18211.18211.4 19.36 19.36 1.94 3 1 1 0 735.87 2860.4929 S738s TMT10 728 (K) NVLGHMQQGGsPTPFDRNFATK (M) NVLGHMQQGGS(0.99)PT(0.0)PFDRNFAT(0.0)K K:TMT10,s:Phosphorylated S PFKM 94165.2 5 2 2707.1 73.28 HUMAN 1 0.5735 3.1195 GHNDKSSTPGLKSNT-p H0YL70;T322-p GHNDKSSTPGLKSNT 0.577114205340763 0.538424435115317 -0.088 0.0716666666666667 4.39205519486272 3.6171967037401 -0.088 0.0716666666666667 0.363742862773637 0.434790783593891 -0.991367893650312 0.843077558606462 H0YL70 TLE3 H0YL70.T322.p_TLE3 H0YL70_T322t _1_1_322_322 H0YL70 H0YL70|H0YKN8|H0YKT5|Q04726|Q04726-4|A0A0D9SES8|Q04726-5|Q04726-6|Q04726-3|Q04726-7|Q04726-2|H0YNT2|F5H7D6|H0YLW9|H0YKH0 Transducin-like enhancer protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8701.8701.2 7.55 3.72 1.331 3 1 1 0 614.3416 1147.7087 T322t TMT10 320 (K) SStPGLK (S) S(0.0)S(0.0)T(0.99)PGLK K:TMT10,t:Phosphorylated T TLE3 85275.2 5 7 447.1 309.48 HUMAN 1 -4.3921 3.6172 GHPKAGHSENGVEED-p Q9NZT2;S496-p GHPKAGHSENGVEED 0.893977543443334 0.113639240126088 -0.041 0.533333333333333 0.950543267561572 12.4559205283424 -0.041 0.533333333333334 0.80342561379944 0.0568077969284851 -0.261426299951067 2.4122153777423 Q9NZT2 OGFR Q9NZT2.S496.p_OGFR Q9NZT2_S496s_1_1_496_496 Q9NZT2 Q9NZT2|Q9NZT2-2 Opioid growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3887.3887.3 19.36 19.36 11.804 2 1 1 0 632.9319 1815.8307 S496s N498n TMT10 493 (K) AGHsEnGVEEDTEGR (T) AGHS(0.99)EN(1.0)GVEEDT(0.0)EGR s:Phosphorylated S,n:Deamidated OGFR 73893.9 1 7 620.1 259.74 HUMAN 1 -0.9505 12.4559 GHRELVLSSPEDLTQ-p E9PGC8;S764-p GHRELVLSSPEDLTQ 0.600920752756956 0.965986453315642 0.0916666666666667 -0.00533333333333332 4.08541988994874 0.214196451394782 0.0916666666666667 -0.00533333333333332 0.390353440050301 0.951875951625443 0.933422865050242 -0.06319450434938 E9PGC8 NotFound E9PGC8.S764.p_NotFound E9PGC8_S764s _1_1_764_764 E9PGC8 E9PGC8 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31474.31474.3 14.86 9.34 1.218 3 1 1 0 935.4666 2724.4166 S764s TMT10 760 (R) ELVLsSPEDLTQDFEEMKR (E) ELVLS(0.99)S(0.0)PEDLT(0.0)QDFEEMKR K:TMT10,s:Phosphorylated S MAP1A 332906.7 2 7 20.1 1016.98 HUMAN 1 4.0854 -0.2142 GHRKRASSENERLQY-p Q9P2Y5;S509-p GHRKRASSENERLQY 0.113413178970906 0.427127081972133 0.529666666666667 -0.106 19.7238820941584 4.9170307984607 0.529666666666667 -0.106 0.0106564313272294 0.322327173719559 3.81994147913522 -1.08861446663793 Q9P2Y5 UVRAG Q9P2Y5.S509.p_UVRAG Q9P2Y5_S509s _1_1_509_509 Q9P2Y5 Q9P2Y5|E9PR71|Q9P2Y5-2 UV radiation resistance-associated gene protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6375.6375.3 8.02 8.02 1.545 3 1 1 0 545.2641 1553.8121 S509s Hydrogen 507 (R) ASsENERLQYK (T) AS(0.0)S(0.99)ENERLQY(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S UVRAG 78948.1 4 3 797.1 223.6 HUMAN 1 19.7239 -4.917 GHRMQHLSEGTKGRQ-p Q5T8D3-3;S409-p GHRMQHLSEGTKGRQ 0.173970410837215 0.00320981770772267 -0.27 -0.718666666666667 15.1284625379365 37.3532196669052 -0.27 -0.718666666666667 0.0307010865662712 0.00018394078403763 -2.90257933509526 -9.00227954367096 Q5T8D3 ACBD5 Q5T8D3.3.S409.p_ACBD5 Q5T8D3-3_S409s _1_1_409_409 Q5T8D3-3 Q5T8D3|Q5T8D3-3|B7Z2R7|Q5T8D3-2|Q5T8D3-4 Isoform 3 of Acyl-CoA-binding domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8063.8063.3 13.75 13.75 3.663 2 1 1 0 523.6021 1488.8245 S409s TMT10 405 (R) MQHLsEGTK (G) MQHLS(0.99)EGT(0.0)K K:TMT10,s:Phosphorylated S ACBD5 59375.9 4 5 760.1 230.2 HUMAN 1 -15.1285 -37.3532 GHRQGHDSLEHDELR-p Q15545;S213-p GHRQGHDSLEHDELR 0.442299902006713 0.953118976700446 0.264333333333333 -0.03 6.52682694592398 0.296161112392686 0.264333333333333 -0.03 0.222493488488647 0.934079603076233 1.37790506847578 -0.0866238413115575 Q15545 TAF7 Q15545.S213.p_TAF7 Q15545_S213s _1_1_213_213 Q15545 Q15545 Transcription initiation factor TFIID subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5225.5225.3 17.42 17.42 99 1 1 1 0 582.2682 1664.819 S213s TMT10 209 (R) QGHDsLEHDELR (E) QGHDS(1.0)LEHDELR s:Phosphorylated S TAF7 40372.5 2 4 1709.1 120.05 HUMAN 1 6.5268 -0.2962 GHRRKGDSEAEALSE-p Q5T1M5;S1012-p GHRRKGDSEAEALSE 0.00956415249523423 0.0035375820744429 -1.67466666666667 -0.841 47.5669074674852 36.6011487799801 -1.67466666666667 -0.841 1.75109316657085e-05 0.00021871830017266 -14.1619042833938 -8.70276452726071 Q5T1M5 FKBP15 Q5T1M5.S1012.p_FKBP15 Q5T1M5_S1012s _1_1_1012_1012 Q5T1M5 Q5T1M5|Q5T1M5-2 FK506-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13771.13771.3 14.81 14.81 5.957 2 1 1 0 767.4205 2220.2803 S1012s TMT10 1008 (R) RKGDsEAEALSEIK (D) RKGDS(0.99)EAEALS(0.0)EIK K:TMT10,s:Phosphorylated S FKBP15 134140.9 4 11 173.1 487.64 HUMAN 1 -47.5669 -36.6011 GHSIRCKSKNLEDDT-p Q14966;S641-p GHSIRCKSKNLEDDT 0.332974650699694 0.0392751385548747 0.169333333333333 -0.278333333333333 8.91439580299018 18.8718051731028 0.169333333333333 -0.278333333333333 0.128398638816331 0.0129664020207175 1.79354432636457 -3.63773996385759 Q14966 ZNF638 Q14966.S641.p_ZNF638 Q14966_S641s _1_1_641_641 Q14966 Q14966|Q14966-3|Q14966-4|A0A096LPH6|Q14966-2 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13772.13772.3 8.89 8.89 2.969 3 1 1 0 769.3908 2226.1891 S641s TMT10 641 (K) sKNLEDDTLSECK (Q) S(0.99)KNLEDDT(0.0)LS(0.0)ECK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF638 222047.2 2 11 165.1 494.68 HUMAN 1 8.9144 -18.8718 GHSSLTNSPLDSSCK-p Q9Y6Q9;S640-p GHSSLTNSPLDSSCK 0.732153232750531 0.0138407437352156 -0.076 0.375 2.56722557100224 25.8099255435742 -0.076 0.375 0.553703722060834 0.00262426353396488 -0.631051601942912 5.24504972066672 Q9Y6Q9 NCOA3 Q9Y6Q9.S640.p_NCOA3 Q9Y6Q9_S640s _1_1_640_640 Q9Y6Q9 Q9Y6Q9|Q9Y6Q9-5|Q9Y6Q9-3|Q9Y6Q9-2|Q9Y6Q9-4 Nuclear receptor coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25660.25660.4 16.05 16.05 1.522 9 1 1 0 883.1865 3449.7405 S640s TMT10 621 (K) LLQLLTCSSDDRGHSSLTNsPLDSSCK (E) LLQLLT(0.0)CS(0.0)S(0.0)DDRGHS(0.0)S(0.0)LT(0.0)NS(0.99)PLDS(0.0)S(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NCOA3 156203.6 3 7 503.1 290.6 HUMAN 1 -2.5672 25.8099 GHSSSELSPDAVEKA-p Q9UQ35;S1387-p GHSSSELSPDAVEKA 0.140621777582522 0.539272693454831 0.268333333333333 0.0613333333333334 17.4340615509457 3.60816284614105 0.268333333333333 0.0613333333333333 0.0180548483476264 0.435696143025 3.34862203152144 0.841314610556883 Q9UQ35 SRRM2 Q9UQ35.S1387.p_SRRM2 Q9UQ35_S1387s _1_1_1387_1387 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9911.9911.3 22.86 22.86 4.294 6 1 1 0 719.0148 2075.0657 S1387s TMT10 1378 (R) SSGHSSSELsPDAVEK (A) S(0.0)S(0.0)GHS(0.0)S(0.0)S(0.0)ELS(0.99)PDAVEK K:TMT10,s:Phosphorylated S SRRM2 300351.7 3 78 2.1 3310.34 HUMAN 1 17.4341 3.6082 GHTGGHHSPVKGAKP-p A0A0A0MQU4;S137-p GHTGGHHSPVKGAKP 0.0495990523839634 0.263752336593741 0.597 0.157333333333333 28.8623703442221 7.62496260020334 0.597 0.157333333333333 0.0012994601495915 0.172784085995517 6.09332701611264 1.56955245726107 A0A0A0MQU4 SCLY A0A0A0MQU4.S137.p_SCLY A0A0A0MQU4_S137s _1_1_137_137 A0A0A0MQU4 A0A0A0MQU4|Q96I15|Q96I15-2 Selenocysteine lyase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.2828.2828.3 13.82 13.82 8.095 2 1 1 0 551.287 1571.8807 S137s TMT10 130 (K) GHTGGHHsPVK (G) GHT(0.0)GGHHS(0.99)PVK K:TMT10,s:Phosphorylated S SCLY 49077.9 2 1 5344.1 20.25 HUMAN 1 28.8624 7.625 GHVAINCSKTSEVNC-p P62633-6;S153-p GHVAINCSKTSEVNC 0.323049007555811 0.102803056914243 0.200666666666667 -0.179 9.18632239238154 13.0498360692851 0.200666666666667 -0.179 0.120605679751612 0.0495468892639664 1.84062108192989 -2.51866277377308 P62633 CNBP P62633.6.S153.p_CNBP P62633-6_S153s _1_1_153_153 P62633-6 P62633-6|P62633-4|P62633-5|P62633-8|P62633-2|P62633-3|P62633-7 Isoform 6 of Cellular nucleic acid-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7695.7695.3 12.61 9.79 5.819 2 1 1 0 657.6464 1890.9566 S153s TMT10 142 (R) CGETGHVAINCsK (T) CGET(0.0)GHVAINCS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CNBP 20945.8 2 3 3556.1 48.29 HUMAN 1 9.1863 -13.0498 GHVEEPASPLAAYQK-p Q12955;S4298-p GHVEEPASPLAAYQK 0.64124158099539 0.0125758238330255 -0.0706666666666667 -0.397 3.60330176492707 26.504663596246 -0.0706666666666667 -0.397 0.436184093064732 0.00223631841685122 -0.840497842765372 -5.42792444733844 Q12955 ANK3 Q12955.S4298.p_ANK3 Q12955_S4298s _1_1_4298_4298 Q12955 Q12955|Q12955-4|Q12955-5|Q12955-7|Q12955-6 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12640.12640.3 22.23 22.23 9.236 3 1 1 0 843.7677 2449.324 S4298s TMT10 4287 (K) IHGSGHVEEPAsPLAAYQK (S) IHGS(0.0)GHVEEPAS(0.99)PLAAY(0.0)QK K:TMT10,s:Phosphorylated S ANK3 482683.6 2 31 135.1 530.51 HUMAN 1 -3.6033 -26.5047 GHYEVTGSDDETGKL-p Q09666;S5841-p GHYEVTGSDDETGKL 0.93306667659969 0.109857354184548 -0.013 0.170666666666667 0.592904784940256 12.6681169768018 -0.013 0.170666666666667 0.872387675446096 0.0540988835184885 -0.168395242332605 2.45012836154158 Q09666 AHNAK Q09666.S5841.p_AHNAK Q09666_S5841s _1_1_5841_5841 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13362.13362.4 24.25 24.25 1.142 8 1 1 0 876.9518 3424.8163 S5841s Hydrogen 5832 (K) SKGHYEVTGsDDETGKLQGSGVSLASK (K) S(0.0)KGHY(0.0)EVT(0.0)GS(0.99)DDET(0.0)GKLQGS(0.0)GVS(0.0)LAS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S AHNAK 629603.7 82 164 1.1 4313.36 HUMAN 1 -0.5929 12.6681 GHYIWVPSPEKL___-p Q92796-2;S508-p GHYIWVPSPEKL___ 0.608256782187761 0.440274240980542 -0.0706666666666667 0.0846666666666667 3.99719032859866 4.74561330645588 -0.0706666666666667 0.0846666666666667 0.398364809616374 0.335303949808312 -0.916592503651362 1.05702275425298 Q92796 DLG3 Q92796.2.S508.p_DLG3 Q92796-2_S508s _1_1_508_508 Q92796-2 Q92796-2|Q92796-3 Isoform 2 of Disks large homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27413.27413.4 15.1 15.1 15.1 3 1 1 0 695.1135 2697.4652 S508s TMT10 494 (K) QIIEDQSGHYIWVPsPEKL (-) QIIEDQS(0.0)GHY(0.0)IWVPS(0.99)PEKL K:TMT10,s:Phosphorylated S DLG3 58107.5 1 4 1430.1 143.07 HUMAN 1 -3.9972 4.7456 GIALDNKSLNECESL-p Q8TDM6;S773-p GIALDNKSLNECESL 0.474960924415695 0.408309097457446 0.0986666666666667 0.0856666666666667 5.95399461227166 5.17743620413573 0.0986666666666667 0.0856666666666667 0.253863660998259 0.303568272756971 1.27636375768172 1.13624039874955 Q8TDM6 DLG5 Q8TDM6.S773.p_DLG5 Q8TDM6_S773s _1_1_773_773 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28554.28554.4 19.25 19.25 5.777 2 1 1 0 745.9034 2900.6279 S773s TMT10 761 (R) IVAINGIALDNKsLNECESLLR (S) IVAINGIALDNKS(0.99)LNECES(0.0)LLR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DLG5 215575.4 4 9 34.1 890.58 HUMAN 1 5.954 5.1774 GICDYFPSPSKTSLP-p Q86XL3;S259-p GICDYFPSPSKTSLP 0.82242509118488 0.00129606731851265 -0.0323333333333333 -0.953 1.63340985757069 47.1384830107027 -0.0323333333333333 -0.953 0.686529200826393 1.932643270833e-05 -0.425995479346494 -13.8602390503804 Q86XL3 ANKLE2 Q86XL3.S259.p_ANKLE2 Q86XL3_S259s _1_1_259_259 Q86XL3 Q86XL3|Q86XL3-2 Ankyrin repeat and LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21654.21859.3 14.71 14.71 3.746 3 1 1 0 603.6288 1728.9031 S259s TMT10 252 (R) GICDYFPsPSK (T) GICDY(0.0)FPS(0.99)PS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANKLE2 104968.3 4 2 897.1 204.02 HUMAN 1 -1.6334 -47.1385 GICPKSPSAIPEQNH-p Q13129;S634-p GICPKSPSAIPEQNH 0.189388000089707 0.948513850677116 -0.330666666666667 0.00666666666666667 14.1514720300191 0.328459821219044 -0.330666666666667 0.00666666666666667 0.0384461447735706 0.927158571921599 -2.72077161800559 0.0957499258541008 Q13129 RLF Q13129.S634.p_RLF Q13129_S634s _1_1_634_634 Q13129 Q13129 Zinc finger protein Rlf HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12863.12863.4 20.28 20.28 1.144 3 1 1 0 790.4131 3078.6609 S634s TMT10 627 (K) GICPKSPsAIPEQNHSLNDQAK (G) GICPKS(0.0)PS(0.99)AIPEQNHS(0.0)LNDQAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RLF 223026.9 2 2 3780.1 43.31 HUMAN 1 -14.1515 0.3285 GIDFLSKTMYLEDRT-p P20340-2;T54-p GIDFLSKTMYLEDRT 0.213229385106179 0.0155764211987011 -0.253 0.513666666666667 12.949258275307 24.9891646316159 -0.253 0.513666666666667 0.0507077303812344 0.00317017719013548 -2.50192754391298 5.03475257878825 P20340 RAB6A P20340.2.T54.p_RAB6A P20340-2_T54t _1_1_54_54 P20340-2 P20340|P20340-2|Q9NRW1|Q9NRW1-2|P20340-4 Isoform 2 of Ras-related protein Rab-6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12939.12939.2 10.76 3.26 5.489 2 1 1 0 618.7799 1156.587 T54t TMT10 54 (K) tMYLEDR (T) T(0.99)MY(0.0)LEDR t:Phosphorylated T RAB6A 23662.4 1 3 2158.1 95.2 HUMAN 1 -12.9493 24.9892 GIDIKPGTPPIAGRS-p Q9Y520-7;T2675-p GIDIKPGTPPIAGRS 0.410184304596165 0.0161347105288124 -0.130666666666667 -0.363 7.13619300139585 24.7526403747144 -0.130666666666667 -0.363 0.193366261100614 0.00334761852533342 -1.48483265414366 -4.97526993978564 Q9Y520 PRRC2C Q9Y520.7.T2675.p_PRRC2C Q9Y520-7_T2675t _1_1_2675_2675 Q9Y520-7 Q9Y520-7|Q9Y520-5|E7EPN9|Q9Y520-4|Q9Y520-6|Q9Y520-3|Q9Y520-2 Isoform 7 of Protein PRRC2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21303.21303.2 16.99 11.2 5.447 2 1 1 0 1146.6302 2212.2854 T2675t TMT10 2664 (K) AFGSGIDIKPGtPPIAGR (S) AFGS(0.0)GIDIKPGT(0.99)PPIAGR K:TMT10,t:Phosphorylated T PRRC2C 317703.2 5 113 36.3 882.05 HUMAN 1 -7.1362 -24.7526 GIDILVGTPGRIKDH-p Q9NR30;T315-p GIDILVGTPGRIKDH 0.282502869387563 0.190946521062401 -0.195333333333333 -0.137 10.3788407418371 9.45673967352514 -0.195333333333333 -0.137 0.0916465088636726 0.113325079565146 -2.04761182474157 -1.88674462586305 Q9NR30 DDX21 Q9NR30.T315.p_DDX21 Q9NR30_T315t _1_1_315_315 Q9NR30 Q9NR30|Q9BQ39|A0A087WVC1|Q9NR30-2 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22410.22410.3 15.03 9.62 99 1 1 1 0 664.3864 1911.1792 T315t TMT10 307 (R) NGIDILVGtPGRIK (D) NGIDILVGT(1.0)PGRIK K:TMT10,t:Phosphorylated T DDX21 87856.3 7 23 103.1 590.75 HUMAN 1 -10.3788 -9.4567 GIEAKSYSVGASGSS-p Q8N684-3;S452-p GIEAKSYSVGASGSS 0.108078410418423 0.144665579071354 0.366666666666667 -0.270333333333333 20.33281008141 11.0595968523711 0.366666666666667 -0.270333333333333 0.0092623031660614 0.0783502370483418 3.95074183396817 -2.16557107295387 Q8N684 CPSF7 Q8N684.3.S452.p_CPSF7 Q8N684-3_S452s _1_1_452_452 Q8N684-3 Q8N684-3|Q8N684-2 Isoform 3 of Cleavage and polyadenylation specificity factor subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5998.5998.2 12.35 12.35 2.132 7 1 1 0 727.33 1373.6858 S452s TMT10 450 (K) SYsVGASGSSSR (K) S(0.0)Y(0.0)S(0.99)VGAS(0.0)GS(0.0)S(0.0)S(0.0)R s:Phosphorylated S CPSF7 56545.1 4 7 1653.1 123.34 HUMAN 1 20.3328 -11.0596 GIEAPKGSIPLSKRK-p O94823-2;S468-p GIEAPKGSIPLSKRK 0.42925899542491 0.15641637371979 0.126 0.188666666666667 6.76298931031926 10.5952592473059 0.126 0.188666666666667 0.210717725076051 0.0871914851737169 1.41945857499931 2.08444413502337 O94823 ATP10B O94823.2.S468.p_ATP10B O94823-2_S468s _1_1_468_468 O94823-2 O94823-2|O94823-3 Isoform B of Probable phospholipid-transporting ATPase VB HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15285.15285.2 7.67 7.67 2.767 2 1 1 0 620.3597 1159.7451 S468s TMT10 467 (K) GsIPLSK (R) GS(0.99)IPLS(0.0)K K:TMT10,s:Phosphorylated S ATP10B 62097.7 1 1 6116.1 13.86 HUMAN 1 6.763 10.5953 GIEGLDESPSRNAAL-p Q8TEW0;S728-p GIEGLDESPSRNAAL 0.583534016877556 0.0181531288520756 0.126 -0.336666666666667 4.30429881936056 23.9739550712191 0.126 -0.336666666666667 0.37116765071531 0.00400501818975811 0.974867776897829 -4.78286468348131 Q8TEW0 PARD3 Q8TEW0.S728.p_PARD3 Q8TEW0_S728s _1_1_728_728 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11|Q8TEW0-4|Q8TEW0-6|Q5VWV2 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19037.19037.3 21.55 21.55 1.297 6 1 1 0 752.697 2176.1083 S728s TMT10 714 (R) ISHSLYSGIEGLDEsPSR (N) IS(0.0)HS(0.0)LY(0.0)S(0.0)GIEGLDES(0.99)PS(0.0)R s:Phosphorylated S PARD3 151933.9 4 12 65.1 692.2 HUMAN 1 4.3043 -23.974 GIEMFHKSLERAEAG-p P49411;S312-p GIEMFHKSLERAEAG 0.759357936811367 0.0036981515606232 -0.09 0.765 2.29036259985872 36.091560398489 -0.09 0.765 0.590151805335631 0.000245948376508449 -0.572186200450097 8.50486901749924 P49411 TUFM P49411.S312.p_TUFM P49411_S312s _1_1_312_312 P49411 P49411 Elongation factor Tu, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17358.17358.3 19.29 19.29 99 1 1 1 0 660.6752 1900.045 S312s TMT10 312 (K) sLERAEAGDNLGALVR (G) S(1.0)LERAEAGDNLGALVR s:Phosphorylated S TUFM 49883 1 3 2716.1 72.95 HUMAN 1 -2.2904 36.0916 GIENKSLSPDEERLV-p Q5UIP0;S2393-p GIENKSLSPDEERLV 0.327023352325424 0.0232251310177084 -0.137 -0.313 9.08443465759346 22.3028460511562 -0.137 -0.313 0.123468602984014 0.00588457896330074 -1.82298005871954 -4.38680671337146 Q5UIP0 RIF1 Q5UIP0.S2393.p_RIF1 Q5UIP0_S2393s _1_1_2393_2393 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37340.37340.3 21.65 19.58 1.107 4 1 1 0 1091.9252 3193.7972 S2393s TMT10 2391 (K) SLsPDEERLVSDIIDPVALEIPLSK (N) S(0.0)LS(0.99)PDEERLVS(0.0)DIIDPVALEIPLS(0.0)K K:TMT10,s:Phosphorylated S RIF1 276628.8 9 38 29.1 922.06 HUMAN 1 -9.0844 -22.3028 GIEYSRVSPQPMISR-p Q9P270;S377-p GIEYSRVSPQPMISR 0.784031061862011 0.0699007719025612 0.0406666666666667 -0.22 2.03359040916644 15.3664476683061 0.0406666666666667 -0.22 0.626096043117254 0.0290639898488696 0.516228093003442 -2.94548554659726 Q9P270 SLAIN2 Q9P270.S377.p_SLAIN2 Q9P270_S377s _1_1_377_377 Q9P270 Q9P270|D6RIF6 SLAIN motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14254.14254.3 15.95 11.54 2.274 4 1 1 0 677.01 1949.0476 S377s TMT10 370 (R) GIEYSRVsPQPMISR (L) GIEY(0.0)S(0.0)RVS(0.99)PQPMIS(0.0)R s:Phosphorylated S SLAIN2 62770.5 8 14 277.1 389.63 HUMAN 1 2.0336 -15.3664 GIFISKVSPTGAAGR-p A0A0G2JPP5;S1140-p GIFISKVSPTGAAGR 0.443459649703882 0.0357381261177297 0.120333333333333 0.267666666666667 6.50899263306194 19.4753383625265 0.120333333333333 0.267666666666667 0.223409037074106 0.0112840801887392 1.37476047460386 3.76384142484988 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1140.p_SCRIB A0A0G2JPP5_S1140s _1_1_1140_1140 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20528.20528.3 13.83 12.34 1.633 4 1 1 0 852.7747 2476.3448 S1140s TMT10 1128 (R) DPTDEGIFISKVsPTGAAGR (D) DPT(0.0)DEGIFIS(0.0)KVS(0.99)PT(0.0)GAAGR K:TMT10,s:Phosphorylated S SCRIB 178690.9 10 24 22.1 1004.81 HUMAN 1 6.509 19.4753 GIFISRVSEEGPAAR-p A0A0G2JPP5;S764-p GIFISRVSEEGPAAR 0.113753456802484 0.152022468714386 0.807333333333333 -0.288666666666667 19.694513963176 10.7576048874454 0.807333333333333 -0.288666666666667 0.0107287371082842 0.0839923072226633 3.81369433358737 -2.11276748363157 A0A0G2JPP5 SCRIB A0A0G2JPP5.S764.p_SCRIB A0A0G2JPP5_S764s _1_1_764_764 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21397.21397.5 13.4 13.4 1.292 7 1 1 0 909.8751 4465.393 S764s TMT10 734 (R) QTGGLGISIAGGKGSTPYKGDDEGIFISRVsEEGPAAR (A) QT(0.0)GGLGIS(0.0)IAGGKGS(0.0)T(0.0)PY(0.0)KGDDEGIFIS(0.0)RVS(0.99)EEGPAAR K:TMT10,s:Phosphorylated S SCRIB 178690.9 2 16 22.1 1004.81 HUMAN 1 19.6945 -10.7576 GIFLGSESDEDSVRT-p Q9BYW2;S323-p GIFLGSESDEDSVRT 0.367960868946422 0.761494407916649 0.135333333333333 0.0373333333333334 8.05197560188238 1.63591018984052 0.135333333333333 0.0373333333333334 0.156603851846871 0.686134064081042 1.64417581631297 0.426525508143096 Q9BYW2 SETD2 Q9BYW2.S323.p_SETD2 Q9BYW2_S321sS323s_2_2_321_323 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15600.15600.3 15.99 13.84 6.099 10 2 2 0 1022.1046 2904.3656 S321s S323s TMT10 311 (K) SSQSEGIFLGsEsDEDSVRTSSSQR (S) S(0.0)S(0.0)QS(0.0)EGIFLGS(0.99)ES(0.99)DEDS(0.0)VRT(0.0)S(0.0)S(0.0)S(0.0)QR s:Phosphorylated S SETD2 290615.4 11 30 58.1 711.11 HUMAN 1 8.052 1.6359 GIGAIGGTPPAFNRA-p Q15233;T450-p GIGAIGGTPPAFNRA 0.887730980008826 0.610906331892352 -0.0216666666666667 -0.0543333333333333 1.00716952568656 2.90744734385182 -0.0216666666666667 -0.0543333333333333 0.793018004278857 0.511982675585675 -0.275675861835921 -0.701453570022149 Q15233 NONO Q15233.T450.p_NONO Q15233_T450t _1_1_450_450 Q15233 Q15233|Q15233-2 Non-POU domain-containing octamer-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26955.27434.3 26.44 26.44 11.18 2 1 1 0 824.7361 2392.2281 T450t TMT10 435 (R) FGQAATMEGIGAIGGtPPAFNR (A) FGQAAT(0.0)MEGIGAIGGT(0.99)PPAFNR t:Phosphorylated T NONO 54344.7 11 6 2102.1 97.61 HUMAN 1 -1.0072 -2.9074 GIGRLHLSGIDANPN-p P49327;S806-p GIGRLHLSGIDANPN 0.477468266229797 0.462290589970792 0.104 0.119333333333333 5.90836305623434 4.46868441655256 0.104 0.119333333333333 0.256545082462344 0.357381081164319 1.26822199122261 1.00553877599556 P49327 FASN P49327.S806.p_FASN P49327_S806s _1_1_806_806 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33677.33677.3 16.37 16.37 99 1 1 1 0 927.8192 2701.4663 S806s TMT10 803 (R) LHLsGIDANPNALFPPVEFPAPR (G) LHLS(1.0)GIDANPNALFPPVEFPAPR s:Phosphorylated S FASN 276046.1 1 8 175.1 481.87 HUMAN 1 5.9084 4.4687 GIHNFRASGDYDNDC-p Q8TAF3;S335-p GIHNFRASGDYDNDC 0.779180118092191 0.073075906915839 -0.041 0.243333333333333 2.08118685716327 15.0908573973016 -0.041 0.243333333333333 0.619271814895175 0.0309680785768858 -0.526707317467896 2.89360674186904 Q8TAF3 WDR48 Q8TAF3.S335.p_WDR48 Q8TAF3_S335s _1_1_335_335 Q8TAF3 Q8TAF3|Q8TAF3-3|Q8TAF3-4 WD repeat-containing protein 48 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20620.20821.4 20.93 20.69 4.498 5 1 1 0 1021.9874 4004.9635 S335s TMT10 328 (K) GIHNFRAsGDYDNDCTNPITPLCTQPDQVIK (G) GIHNFRAS(0.99)GDY(0.0)DNDCT(0.0)NPIT(0.0)PLCT(0.0)QPDQVIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WDR48 77064.9 5 1 3454.1 50.54 HUMAN 1 -2.0812 15.0909 GIKRRDRSPSRLDTF-p Q66GS9;S439-p GIKRRDRSPSRLDTF 0.507622618955214 0.104002127283355 0.111666666666667 0.182333333333333 5.43245556927824 12.9856210272695 0.111666666666667 0.182333333333333 0.286255897639858 0.0502849354853724 1.18275068766168 2.50710250097869 Q66GS9 CEP135 Q66GS9.S439.p_CEP135 Q66GS9_S439s _1_1_439_439 Q66GS9 Q66GS9 Centrosomal protein of 135 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14642.14642.3 12.29 8.86 2.905 3 1 1 0 581.9707 1663.9329 S439s Hydrogen 437 (R) DRsPSRLDTFLK (G) DRS(0.99)PS(0.0)RLDT(0.0)FLK K:TMT10-Lys-Only,s:Phosphorylated S CEP135 133944.3 4 5 2135.1 96.32 HUMAN 1 5.4325 12.9856 GIKSEPHSPGIPEIF-p Q8ND82;S80-p GIKSEPHSPGIPEIF 0.222529467627964 0.744658741972167 -0.179333333333333 -0.035 12.5546833754758 1.76703692866455 -0.179333333333333 -0.035 0.0555305100434796 0.665727208583215 -2.4311242784636 -0.456518663985087 Q8ND82 ZNF280C Q8ND82.S80.p_ZNF280C Q8ND82_S80s _1_1_80_80 Q8ND82 Q8ND82 Zinc finger protein 280C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18887.18887.3 19.8 19.8 4.965 2 1 1 0 592.2969 1694.9063 S80s TMT10 76 (K) SEPHsPGIPEIFR (T) S(0.0)EPHS(0.99)PGIPEIFR s:Phosphorylated S ZNF280C 84920.2 2 1 1894.1 108.64 HUMAN 1 -12.5547 -1.767 GIKTSGESEEIEMVI-p Q2KHT3;S433-p GIKTSGESEEIEMVI 0.489467581857261 0.0636235814715044 0.141333333333333 0.249 5.71942117370688 15.9304055093371 0.141333333333333 0.249 0.267952542731114 0.0255246296302511 1.23441513341421 3.05269338502557 Q2KHT3 CLEC16A Q2KHT3.S433.p_CLEC16A Q2KHT3_S433s _1_1_433_433 Q2KHT3 Q2KHT3 Protein CLEC16A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26935.26935.3 15.21 14.99 3.442 3 1 1 0 683.6425 1968.9456 S433s TMT10 429 (K) TSGEsEEIEMVIMER (S) T(0.0)S(0.0)GES(0.99)EEIEMVIMER s:Phosphorylated S CLEC16A 118682.8 1 2 3223.1 56.9 HUMAN 1 5.7194 15.9304 GILAADESTGSIAKR-p P04075;S36-p GILAADESTGSIAKR 0.682078728827876 0.0433664439628272 0.0593333333333333 0.266333333333333 3.11441424362638 18.2597136009208 0.0593333333333333 0.266333333333333 0.488155937029759 0.0149289285638398 0.743556840214281 3.51209060235966 P04075 ALDOA P04075.S36.p_ALDOA P04075_S36s _1_1_36_36 P04075 P04075-2|J3KPS3|H3BQN4|P00883 Fructose-bisphosphate aldolase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19527.19527.2 20.68 20.68 1.15 3 1 1 0 935.9996 1791.0264 S36s TMT10 29 (K) GILAADEsTGSIAK (R) GILAADES(0.99)T(0.0)GS(0.0)IAK K:TMT10,s:Phosphorylated S ALDOA 39875.7 12 2 1050.1 183.91 HUMAN 1 3.1144 18.2597 GILAADESVGSMAKR-p P09972;S36-p GILAADESVGSMAKR 0.792798769070852 0.00858588632074846 -0.0376666666666667 0.573333333333333 1.94474907022756 29.3134161416573 -0.0376666666666667 0.573333333333333 0.639035658941057 0.00117127368427373 -0.496531260654242 6.21636081198463 P09972 ALDOC P09972.S36.p_ALDOC P09972_S36s _1_1_36_36 P09972 P09972|A8MVZ9 Fructose-bisphosphate aldolase C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21279.21279.3 11.81 11.81 3.231 2 1 1 0 629.6621 1807.0036 S36s TMT10 29 (K) GILAADEsVGSMAK (R) GILAADES(0.99)VGS(0.0)MAK K:TMT10,s:Phosphorylated S ALDOC 39854.5 1 11 1050.2 183.91 HUMAN 1 -1.9447 29.3134 GILARQQSVESLAEE-p Q8WXH0;S2781-p GILARQQSVESLAEE 0.527533183247732 0.00360332108061802 -0.136 0.712666666666667 5.1377917143492 36.3535560284082 -0.136 0.712666666666667 0.306352076623059 0.000231549793041596 -1.12925023505574 8.60611160102616 Q8WXH0 SYNE2 Q8WXH0.S2781.p_SYNE2 Q8WXH0_S2781s_1_1_2781_2781 Q8WXH0 Q8WXH0-2|A0A0A0MRE3|G3V5X4 Nesprin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24674.24674.2 14.93 14.93 6.089 2 1 1 0 819.8947 1575.8427 Q2779q S2781s Hydrogen 2779 (R) qQsVESLAEEVK (D) Q(1.0)QS(0.99)VES(0.0)LAEEVK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S SYNE2 802304.8 4 8 188.1 472.65 HUMAN 1 -5.1378 36.3536 GILASPQSAPGNLDN-p Q9Y6M7-13;S267-p GILASPQSAPGNLDN 0.0495429320354942 0.15437016335331 0.477333333333333 0.148 28.9191277325449 10.6717931366459 0.477333333333333 0.148 0.00128258816077763 0.0856684060225724 6.1098885828003 2.09779131717938 Q9Y6M7 SLC4A7 Q9Y6M7.13.S267.p_SLC4A7 Q9Y6M7-13_S267s _1_1_267_267 Q9Y6M7-13 Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-9|Q9Y6M7-2|Q9Y6M7-3|Q9Y6M7-4|Q9Y6M7-14|Q9Y6M7-11 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18488.18488.2 20.31 20.31 2.433 3 1 1 0 1161.0983 2241.2239 S267s TMT10 259 (R) NGILASPQsAPGNLDNSK (S) NGILAS(0.0)PQS(0.99)APGNLDNS(0.0)K K:TMT10,s:Phosphorylated S SLC4A7 128884.6 12 7 207.1 445.25 HUMAN 1 28.9191 10.6718 GILEKQPSPEEIRER-p Q9Y520-7;S502-p GILEKQPSPEEIRER 0.651461204714676 0.0970280843037502 -0.0796666666666667 -0.302333333333333 3.48786170950978 13.3964098009881 -0.0796666666666667 -0.302333333333333 0.447933794386872 0.045746620870641 -0.817874133074056 -2.5812810535019 Q9Y520 PRRC2C Q9Y520.7.S502.p_PRRC2C Q9Y520-7_S502s _1_1_502_502 Q9Y520-7 Q9Y520-7|Q9Y520-5 Isoform 7 of Protein PRRC2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17799.17799.4 12.8 12.8 99 1 1 1 0 608.8404 2352.3651 S502s TMT10 494 (K) LGILEKQPsPEEIRER (E) LGILEKQPS(1.0)PEEIRER K:TMT10,s:Phosphorylated S PRRC2C 317703.2 1 97 36.3 882.05 HUMAN 1 -3.4879 -13.3964 GILKKPPSPKSSTEE-p E7EQN9;S487-p GILKKPPSPKSSTEE 0.297311465557868 0.409982199971115 0.920666666666667 -0.560333333333333 9.92211034250418 5.15190457776811 0.920666666666667 -0.560333333333333 0.101809654996408 0.305358168583089 1.96818147881675 -1.13158928434737 E7EQN9 INPP4B E7EQN9.S487.p_INPP4B E7EQN9_S487s _1_1_487_487 E7EQN9 E7EQN9|O15327 Type II inositol 3,4-bisphosphate 4-phosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10888.10888.3 10.94 9.04 1.873 6 1 1 0 1059.5485 3096.6603 S487s TMT10 484 (K) KPPsPKSSTEESSPQDQPPVMR (G) KPPS(0.99)PKS(0.0)S(0.0)T(0.0)EES(0.0)S(0.0)PQDQPPVMR K:TMT10,s:Phosphorylated S INPP4B 106985.3 3 3 2919.1 65.99 HUMAN 1 9.9221 -5.1519 GILYRTHSDQFLVAF-p P36542;S146-p GILYRTHSDQFLVAF 0.361563717703528 0.856030800980723 -0.129666666666667 0.025 8.21044419395118 0.951575412044637 -0.129666666666667 0.025 0.150992571191437 0.803234694315717 -1.67164863976994 0.261661521904821 P36542 ATP5C1 P36542.S146.p_ATP5C1 P36542_S146s _1_1_146_146 P36542 P36542|P36542-2 ATP synthase subunit gamma, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22482.22482.2 12.87 12.87 2.652 2 1 1 0 915.9832 1750.9892 S146s TMT10 144 (R) THsDQFLVAFK (E) T(0.0)HS(0.99)DQFLVAFK K:TMT10,s:Phosphorylated S ATP5C1 33052.5 3 1 5906.1 15.45 HUMAN 1 -8.2104 0.9516 GIMLKAQSIELEEGS-p E9PKB1;S397-p GIMLKAQSIELEEGS 0.227824784716705 0.00658370813716136 -0.225 -0.678333333333333 12.3473773974197 31.3568981097504 -0.225 -0.678333333333334 0.0582454842418206 0.000731661476328567 -2.39410556672915 -6.84432434086014 E9PKB1 NotFound E9PKB1.S397.p_NotFound E9PKB1_S397s _1_1_397_397 E9PKB1 E9PKB1|Q0P6D6 Coiled-coil domain-containing protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25380.25380.3 14 10.92 5.94 2 1 1 0 685.3779 1974.1523 S397s TMT10 395 (K) AQsIELEEGSIVLK (T) AQS(0.99)IELEEGS(0.0)IVLK K:TMT10,s:Phosphorylated S CCDC15 112563.1 1 1 4759.1 26.96 HUMAN 1 -12.3474 -31.3569 GIMPPLKSPAAFHEQ-p Q9ULH7-5;S77-p GIMPPLKSPAAFHEQ 0.0226658255357827 0.00112568182952083 -1.009 -1.12666666666667 38.1057452569919 49.1930342062053 -1.009 -1.12666666666667 0.000154676905287465 1.2041943338749e-05 -9.33137781138139 -15.1533326807661 Q9ULH7 MKL2 Q9ULH7.5.S77.p_MKL2 Q9ULH7-5_S77s _1_1_77_77 Q9ULH7-5 Q9ULH7-5|Q9ULH7-4|Q9ULH7-3|Q9ULH7-2|I3L2S3 Isoform 5 of MKL/myocardin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24653.24653.5 16.65 16.65 99 1 1 1 0 669.5685 3263.8429 S77s TMT10 64 (R) EQLVDQGIMPPLKsPAAFHEQIK (S) EQLVDQGIMPPLKS(1.0)PAAFHEQIK K:TMT10,s:Phosphorylated S MKL2 119334.1 5 2 464.1 303.55 HUMAN 1 -38.1057 -49.193 GIMRRGESLDNLDSP-p Q8WWI1-3;S1176-p GIMRRGESLDNLDSP 0.947077584220076 0.988520181148994 0.0136666666666667 0.00233333333333333 0.467934474733296 0.0760672936206307 0.0136666666666667 0.00233333333333332 0.897855717430343 0.982637356815717 0.134516839250204 0.022784279987961 Q8WWI1 LMO7 Q8WWI1.3.S1176.p_LMO7 Q8WWI1-3_S1176s _1_1_1176_1176 Q8WWI1-3 Q8WWI1|Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8599.8599.3 12.7 12.7 5.049 2 1 1 0 556.6036 1587.8288 S1176s TMT10 1173 (R) RGEsLDNLDSPR (S) RGES(0.99)LDNLDS(0.0)PR s:Phosphorylated S LMO7 154694.3 3 27 61.1 704.74 HUMAN 1 0.4679 0.0761 GINGHADSPAPVNGI-p Q14566;S689-p GINGHADSPAPVNGI 0.59771621157384 0.0610364740107311 0.0766666666666667 0.227666666666667 4.12934984919105 16.1755982230763 0.0766666666666667 0.227666666666667 0.38642482158503 0.0241234921836079 0.94177557582816 3.09975984722823 Q14566 MCM6 Q14566.S689.p_MCM6 Q14566_S689s_1_1_689_689 Q14566 Q14566 DNA replication licensing factor MCM6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25538.26225.4 23.77 16.92 0.535 4 1 1 0 1454.9037 5734.6412 N684n S689s N697n Hydrogen 659 (R) VETPDVNLDQEEEIQMEVDEGAGGInGHADsPAPVNGInGYNEDINQESAPK (A) VET(0.0)PDVN(0.0)LDQEEEIQMEVDEGAGGIN(0.99)GHADS(0.99)PAPVN(0.33)GIN(0.33)GY(0.0)N(0.33)EDIN(0.0)QES(0.0)APK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S MCM6 93857.5 43 6 1039.1 185.36 HUMAN 1 4.1293 16.1756 GIPIRVYTHEVVTLW-p P06493;T161-p GIPIRVYTHEVVTLW 0.889228723807056 0.354075794036297 -0.0226666666666667 -0.148 0.995602266408064 5.97856413485655 -0.0226666666666667 -0.148 0.795132991257067 0.252431522405188 -0.272774938194826 -1.28044041672266 P06493 CDK1 P06493.T161.p_CDK1 P06493_T161t _1_1_161_161 P06493 P06493|A0A087WZZ9 Cyclin-dependent kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23394.23691.3 20.43 20.43 8.596 4 1 1 0 625.651 1794.974 T161t TMT10 159 (R) VYtHEVVTLWYR (S) VY(0.0)T(0.99)HEVVT(0.0)LWY(0.0)R t:Phosphorylated T CDK1 34151.9 9 6 1934.1 106.29 HUMAN 1 -0.9956 -5.9786 GIPLPAESPKKGPKK-p Q8IXM2-2;S62-p GIPLPAESPKKGPKK 0.512047080261968 0.00259997565261951 0.169333333333333 -0.849333333333333 5.37526176709265 39.4419898172949 0.169333333333333 -0.849333333333333 0.290050636801189 0.000113710617582863 1.17240385568841 -9.88318418814844 Q8IXM2 C17orf49 Q8IXM2.2.S62.p_C17orf49 Q8IXM2-2_S62s _1_1_62_62 Q8IXM2-2 H0YIS7|Q8IXM2-3|F8W1H0|F8W038|Q8IXM2-2 Isoform 2 of Chromatin complexes subunit BAP18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16577.16577.5 19.35 18.39 5.308 3 1 1 0 673.9937 3285.9795 S62s TMT10 50 (K) VYEDSGIPLPAEsPKKGPKK (V) VY(0.0)EDS(0.0)GIPLPAES(0.99)PKKGPKK K:TMT10,s:Phosphorylated S BAP18 13957.6 23 3 617.1 261.02 HUMAN 1 5.3753 -39.442 GIQAFTASK______-p Q92947;S437-p GIQAFTASK______ 0.491725725803355 0.0791122598095691 0.0996666666666667 0.219666666666667 5.67539968833212 14.6225496336912 0.0996666666666667 0.219666666666667 0.270682407899991 0.0344941173592266 1.22651548417505 2.80618034221663 Q92947 GCDH Q92947.S437.p_GCDH Q92947_S437s _1_1_437_437 Q92947 Q92947 Glutaryl-CoA dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22956.22956.3 12.63 12.63 1.756 3 1 1 0 582.6584 1665.994 S437s TMT10 427 (R) AITGIQAFTAsK (-) AIT(0.0)GIQAFT(0.0)AS(0.99)K K:TMT10,s:Phosphorylated S GCDH 48639.8 1 1 6276.1 12.63 HUMAN 1 5.6754 14.6225 GIQDDHESCGSNSTN-p Q7Z7G8;S102-p GIQDDHESCGSNSTN 0.247049795569645 0.0546365883779223 -0.227 -0.252333333333333 11.5948605665625 16.8306684754061 -0.227 -0.252333333333333 0.0692650167123421 0.0207459416688236 -2.26067331821099 -3.2269291609948 Q7Z7G8 VPS13B Q7Z7G8.S102.p_VPS13B Q7Z7G8_S102sS105s_2_2_102_105 Q7Z7G8 Q7Z7G8|Q7Z7G8-6|Q7Z7G8-2|Q7Z7G8-3|Q7Z7G8-4|Q7Z7G8-5 Vacuolar protein sorting-associated protein 13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9111.9111.3 13.33 13.33 1.122 4 2 2 0 917.7321 2591.252 S102s S105s TMT10 92 (K) LKDGIQDDHEsCGsNSTNR (S) LKDGIQDDHES(0.99)CGS(0.99)NS(0.0)T(0.0)NR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S VPS13B 454589.9 2 15 766.1 229.13 HUMAN 1 -11.5949 -16.8307 GIQKLGVSSGLVRGS-p Q9NYQ6;S2777-p GIQKLGVSSGLVRGS 0.172579420231791 0.0770565683209836 -0.331 -0.312666666666667 15.1920945052285 14.7685093703805 -0.331 -0.312666666666667 0.0302545396736242 0.0333540874404491 -2.91455690778518 -2.83333264841716 Q9NYQ6 CELSR1 Q9NYQ6.S2777.p_CELSR1 Q9NYQ6_S2777s _1_1_2777_2777 Q9NYQ6 Q9NYQ6 Cadherin EGF LAG seven-pass G-type receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17777.17777.2 7.37 3.54 1.248 2 1 1 0 598.8332 1116.6938 S2777s TMT10 2774 (K) LGVsSGLVR (G) LGVS(0.99)S(0.0)GLVR s:Phosphorylated S CELSR1 334558.1 1 4 1317.1 154.7 HUMAN 1 -15.1921 -14.7685 GIQMPAFSKIGGILA-p P46940;S200-p GIQMPAFSKIGGILA 0.171396449036957 0.692557880990475 -0.250333333333333 -0.046 15.2566106034605 2.18935879263642 -0.250333333333333 -0.046 0.0298084188234833 0.604037805019602 -2.92671870329307 -0.550274028890257 P46940 IQGAP1 P46940.S200.p_IQGAP1 P46940_S200s _1_1_200_200 P46940 P46940|A0A0J9YXZ5 Ras GTPase-activating-like protein IQGAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25156.25156.3 11.93 11.93 8.354 2 1 1 0 560.6271 1599.8969 S200s TMT10 192 (K) YGIQMPAFsK (I) Y(0.0)GIQMPAFS(0.99)K K:TMT10,s:Phosphorylated S IQGAP1 189876.1 1 3 1386.1 147.7 HUMAN 1 -15.2566 -2.1894 GIRFRGFSIPECQKL-p O75390;S97-p GIRFRGFSIPECQKL 0.771876433825123 0.0936592130974197 0.041 0.192333333333333 2.15312186998272 13.6023868903344 0.041 0.192333333333333 0.609098896931576 0.0436275988263939 0.54245115113029 2.61868438045489 O75390 CS O75390.S97.p_CS O75390_S97s _1_1_97_97 O75390 O75390|B4DJV2|A0A0C4DGI3|F8VWQ5 Citrate synthase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18054.18054.3 12.11 8.2 99 1 1 1 0 535.2716 1523.8292 S97s TMT10 95 (R) GFsIPECQK (L) GFS(1.0)IPECQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CS 51939.7 2 1 5400.1 19.69 HUMAN 1 2.1531 13.6024 GIRSRSRSRELYLQE-p P51178-2;S12-p GIRSRSRSRELYLQE 0.679338422233927 0.0168554002399095 0.0713333333333333 0.419 3.14388969063545 24.4719353085922 0.0713333333333333 0.419 0.484854053684933 0.00357113665243578 0.749489414983051 4.90531099654182 P51178 PLCD1 P51178.2.S12.p_PLCD1 P51178-2_S12s _1_1_12_12 P51178-2 P51178-2 Isoform 2 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9472.9472.3 11.71 11.71 7.163 2 1 1 0 501.5906 1422.7902 S12s TMT10 12 (R) sRELYLQER (S) S(0.99)RELY(0.0)LQER s:Phosphorylated S PLCD1 88932.1 3 1 1846.1 111.27 HUMAN 1 3.1439 24.4719 GIRSVCVSPNGQHLA-p O60336;S488-p GIRSVCVSPNGQHLA 0.572920879096438 0.588085210395351 0.105 0.0653333333333334 4.45072204054138 3.11548506343441 0.105 0.0653333333333334 0.358862266687695 0.488035589516571 1.0023631585765 0.743665870894863 O60336 MAPKBP1 O60336.S488.p_MAPKBP1 O60336_S488s _1_1_488_488 O60336 O60336 Mitogen-activated protein kinase-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8452.8452.3 13.82 13.82 3.612 3 1 1 0 664.976 1912.9497 S488s TMT10 484 (R) SVCVsPNGQHLASGDR (M) S(0.0)VCVS(0.99)PNGQHLAS(0.0)GDR C:Carbamidomethylation,s:Phosphorylated S MAPKBP1 165641 1 2 2161.1 95 HUMAN 1 4.4507 3.1155 GIRVVDNSPPPALPP-p Q13905-4;S298-p GIRVVDNSPPPALPP 0.766186662098155 0.851509870244216 0.0466666666666667 -0.0196666666666666 2.21863514635631 0.981126396296749 0.0466666666666667 -0.0196666666666667 0.599979601718782 0.797787744342588 0.556693846293789 -0.269111020375952 Q13905 RAPGEF1 Q13905.4.S298.p_RAPGEF1 Q13905-4_S298s _1_1_298_298 Q13905-4 Q13905-3|Q13905-4|Q13905-2 Isoform 4 of Rap guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16207.16207.3 20.1 20.1 99 1 1 1 0 742.7654 2146.3203 S298s TMT10 294 (R) VVDNsPPPALPPKK (R) VVDNS(1.0)PPPALPPKK K:TMT10,s:Phosphorylated S RAPGEF1 123026.2 11 5 676.1 246.9 HUMAN 1 2.2186 -0.9811 GISAPQVSIPDVNVN-p Q09666;S5195-p GISAPQVSIPDVNVN 0.149214344489706 0.452956516490911 0.616333333333333 -0.0783333333333333 16.650550737301 4.58306354143993 0.616333333333333 -0.0783333333333333 0.0216244428256277 0.348091682280626 3.19412109256541 -1.02687314407392 Q09666 AHNAK Q09666.S5195.p_AHNAK Q09666_S5195s _1_1_5195_5195 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29863.29863.5 21.52 24.06 6.629 4 1 1 0 636.3634 3097.8228 S5195s TMT10 5182 (K) VKTPSFGISAPQVsIPDVNVNLK (G) VKT(0.0)PS(0.0)FGIS(0.0)APQVS(0.99)IPDVNVNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 5 122 1.1 4313.36 HUMAN 1 16.6506 -4.5831 GISEGQGTAGEEEEK-p O43583;T86-p GISEGQGTAGEEEEK 0.649214474510535 0.846357318977032 0.063 -0.0486666666666666 3.5183998623536 1.01810865746517 0.063 -0.0486666666666667 0.444795119957389 0.791023041724008 0.823874095164337 -0.278387158326641 O43583 DENR O43583.T86.p_DENR O43583_T86t _1_1_86_86 O43583 O43583|F8VVL1 Density-regulated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14825.14825.4 22.53 22.53 6.3 4 1 1 0 871.9405 3404.7636 T86t TMT10 68 (K) LTVENSPKQEAGISEGQGtAGEEEEK (K) LT(0.0)VENS(0.0)PKQEAGIS(0.0)EGQGT(0.99)AGEEEEK K:TMT10,t:Phosphorylated T DENR 22491 6 5 1681.1 121.37 HUMAN 1 3.5184 -1.0181 GISNPPGTPRDDGEL-p Q9BWW4-2;T333-p GISNPPGTPRDDGEL 0.333299394179268 0.148168676429691 0.214666666666667 0.149 8.90914014082373 10.9187998393175 0.214666666666667 0.149 0.128554115890406 0.0809319521469762 1.79263456915055 2.1409327274149 Q9BWW4 SSBP3 Q9BWW4.2.T333.p_SSBP3 Q9BWW4-2_T333t _1_1_333_333 Q9BWW4-2 Q9BWW4|Q9BWW4-3|Q9BWW4-2|A0A087WVT6|Q9NW25 Isoform 2 of Single-stranded DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10855.10855.3 8.4 8.4 2.394 4 1 1 0 677.6673 1951.0195 T333t TMT10 319 (K) NSPNNISGISNPPGtPR (D) NS(0.0)PNNIS(0.0)GIS(0.0)NPPGT(0.99)PR t:Phosphorylated T SSBP3 37867.8 1 3 2558.1 78.64 HUMAN 1 8.9091 10.9188 GISVLEMSHRSSDFA-p Q9Y617;S43-p GISVLEMSHRSSDFA 0.373121753887991 0.0111748881290987 -0.223666666666667 -0.499 7.94208850139438 27.3326465050309 -0.223666666666667 -0.499 0.160616866843012 0.0018481420543942 -1.62511287210224 -5.6519482000148 Q9Y617 PSAT1 Q9Y617.S43.p_PSAT1 Q9Y617_S43s _1_1_43_43 Q9Y617 Q9Y617|Q9Y617-2 Phosphoserine aminotransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18535.18535.3 9.25 9.25 4.055 2 1 1 0 531.9391 1513.8358 S43s TMT10 34 (K) GVGISVLEMsHR (S) GVGIS(0.0)VLEMS(0.99)HR s:Phosphorylated S PSAT1 40821.3 1 1 3767.1 43.58 HUMAN 1 -7.9421 -27.3326 GITELSRSISVDLAE-p Q9H410;S123-p GITELSRSISVDLAE 0.293267636803206 0.064168893654849 -0.219333333333333 -0.302666666666667 10.0520163646753 15.8762552802115 -0.219333333333333 -0.302666666666667 0.0988094230690561 0.025844877139774 -1.99074895211019 -3.04233676316532 Q9H410 DSN1 Q9H410.S123.p_DSN1 Q9H410_S123s _1_1_123_123 Q9H410 Q9H410|Q9H410-4|Q9H410-2|Q5JW54|Q9H410-3 Kinetochore-associated protein DSN1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19523.19523.3 12.06 12.06 1.708 3 1 1 0 529.6209 1506.8779 S123s TMT10 123 (R) sISVDLAESK (R) S(0.99)IS(0.0)VDLAES(0.0)K K:TMT10,s:Phosphorylated S DSN1 40408.8 1 6 1406.1 145.92 HUMAN 1 -10.052 -15.8763 GITLLNVSKLNILKL-p P36578;S233-p GITLLNVSKLNILKL 0.145152146047681 0.0294806828948476 -0.3 0.356666666666667 17.0891629659651 20.7134317344942 -0.3 0.356666666666667 0.0195471616014547 0.00848509729496716 -3.28021689120825 4.02981727585536 P36578 RPL4 P36578.S233.p_RPL4 P36578_S233s _1_1_233_233 P36578 P36578|H3BM89 60S ribosomal protein L4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29851.29851.3 13.88 13.88 5.381 2 1 1 0 603.0222 1727.0831 S233s TMT10 223 (R) NIPGITLLNVsK (L) NIPGIT(0.0)LLNVS(0.99)K K:TMT10,s:Phosphorylated S RPL4 47981.8 1 2 2767.1 71.26 HUMAN 1 -17.0892 20.7134 GIVMPDGSGIYDPCE-p Q12906-7;S289-p GIVMPDGSGIYDPCE 0.89536917010512 0.117101243280931 -0.0216666666666667 0.251 0.938836315260544 12.2824178971255 -0.0216666666666667 0.251 0.805594269908214 0.059123237899382 -0.258465000064974 2.38130891384967 Q12906 ILF3 Q12906.7.S289.p_ILF3 Q12906-7_S289s _1_1_289_289 Q12906-7 Q12906-7|Q12906-3|Q12906-6|Q12906-2|Q12906-4|Q12906-5 Isoform 7 of Interleukin enhancer-binding factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.35386.35386.3 16.2 16.2 3.463 3 1 1 0 1016.8224 2968.487 S289s TMT10 275 (R) VLECLASGIVMPDGsGIYDPCEK (E) VLECLAS(0.0)GIVMPDGS(0.99)GIY(0.0)DPCEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ILF3 96205.6 2 7 130.1 537.24 HUMAN 1 -0.9388 12.2824 GIVTVEQSPSSSKLK-p Q8NFC6;S2905-p GIVTVEQSPSSSKLK 0.238535570822241 0.00171684026921227 0.210666666666667 -1.3 11.9099475806316 43.8602447646351 0.210666666666667 -1.30650631987294 0.0644177040688753 4.11126549712791e-05 2.31637193167607 -12.0117570150028 Q8NFC6 BOD1L1 Q8NFC6.S2905.p_BOD1L1 Q8NFC6_S2905s _1_1_2905_2905 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13862.13862.4 24.3 20.31 4.069 8 1 1 0 834.942 3256.7752 S2905s TMT10 2889 (K) MKDDSKTDTGIVTVEQsPSSSK (L) MKDDS(0.0)KT(0.0)DT(0.0)GIVT(0.0)VEQS(0.99)PS(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S BOD1L1 332628.7 3 23 97.1 603.4 HUMAN 1 11.9099 -43.8602 GIYTYSLSPSKVSGD-p O95197;S229-p GIYTYSLSPSKVSGD 0.0775649771385732 0.00105578872948118 -0.597666666666667 -1.18566666666667 23.7681330991963 50.6747201424815 -0.597666666666667 -1.18566666666667 0.00419939464488628 8.56106877106005e-06 -4.73839728241544 -16.1568904181201 O95197 RTN3 O95197.S229.p_RTN3 O95197_S229s _1_1_229_229 O95197 O95197|O95197-2|O95197-7 Reticulon-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25239.25239.4 21.01 21.01 1.143 7 1 1 0 789.1699 3073.6912 S229s TMT10 220 (K) VEGIYTYSLsPSKVSGDDVIEK (D) VEGIY(0.0)T(0.0)Y(0.0)S(0.0)LS(0.99)PS(0.0)KVS(0.0)GDDVIEK K:TMT10,s:Phosphorylated S RTN3 113236.6 4 2 1374.1 148.87 HUMAN 1 -23.7681 -50.6747 GIYVTRVSEGGPAEI-p O14907;S61-p GIYVTRVSEGGPAEI 0.38772780028682 0.946174194753009 -0.136333333333333 -0.00699999999999997 7.61056554230665 0.344180786531273 -0.136333333333333 -0.00699999999999997 0.17335782348876 0.923808430775327 -1.56752169973112 -0.100170761935275 O14907 TAX1BP3 O14907.S61.p_TAX1BP3 O14907_S61s _1_1_61_61 O14907 O14907 Tax1-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25386.25386.3 20.38 20.38 99 1 1 1 0 727.0524 2099.1749 S61s TMT10 60 (R) VsEGGPAEIAGLQIGDK (I) VS(1.0)EGGPAEIAGLQIGDK K:TMT10,s:Phosphorylated S TAX1BP3 13734.5 4 2 2411.1 84.6 HUMAN 1 -7.6106 -0.3442 GKAARRLSLMLHGLV-p Q6P2E9;S1389-p GKAARRLSLMLHGLV 0.818310244599553 0.114520564303969 -0.0443333333333333 0.437666666666667 1.67624365895106 12.4129787907128 -0.0443333333333333 0.437666666666667 0.679791349999396 0.0573722815386066 -0.435847162635259 2.40455840088172 Q6P2E9 EDC4 Q6P2E9.S1389.p_EDC4 Q6P2E9_S1389s _1_1_1389_1389 Q6P2E9 Q6P2E9|Q6P2E9-2 Enhancer of mRNA-decapping protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32837.32837.3 13.06 13.06 8.77 3 1 1 0 648.3642 1863.1087 S1389s TMT10 1387 (R) RLsLMLHGLVTPSLP (-) RLS(0.99)LMLHGLVT(0.0)PS(0.0)LP s:Phosphorylated S EDC4 153084.9 1 21 177.1 481.34 HUMAN 1 -1.6762 12.413 GKAESSDSGAESEEE-p Q5T8D3-3;S187-p GKAESSDSGAESEEE 0.342559001712462 0.962290182291263 0.176 -0.00699999999999999 8.64326505633887 0.237891211557555 0.176 -0.007 0.136670094391606 0.946696733983997 1.74661085970404 -0.0700081650320746 Q5T8D3 ACBD5 Q5T8D3.3.S187.p_ACBD5 Q5T8D3-3_S187sS191s_2_2_187_191 Q5T8D3-3 Q5T8D3|Q5T8D3-3|B7Z2R7|Q5T8D3-2|Q5T8D3-4 Isoform 3 of Acyl-CoA-binding domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16173.16173.5 20.58 20.58 1.128 5 2 2 0 858.5923 4128.9986 S187s S191s TMT10 182 (K) AESSDsGAEsEEEEAQEEVKGAEQSDNDKK (M) AES(0.0)S(0.0)DS(0.99)GAES(0.99)EEEEAQEEVKGAEQS(0.0)DNDKK K:TMT10,s:Phosphorylated S ACBD5 59375.9 13 7 760.1 230.2 HUMAN 1 8.6433 -0.2379 GKAKPVVSDFDSDEE-p P51531;S1568-p GKAKPVVSDFDSDEE 0.279768059006979 0.363613725348209 0.682 0.593666666666667 10.4539616444798 5.82576824584453 0.682 0.593666666666667 0.0900749097284028 0.261470787810217 2.06070145106603 1.25317270193182 P51531 SMARCA2 P51531.S1568.p_SMARCA2 P51531_S1568sS1572s_2_2_1568_1572 P51531 P51531|P51531-2|F6VDE0|B1ALF6 Probable global transcription activator SNF2L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15505.15505.3 11.4 11.4 99 2 2 2 0 862.0482 2424.1931 S1568s S1572s TMT10 1563 (K) AKPVVsDFDsDEEQDER (E) AKPVVS(1.0)DFDS(1.0)DEEQDER K:TMT10,s:Phosphorylated S SMARCA2 181903.8 1 27 392.2 331.85 HUMAN 1 10.454 5.8258 GKANRQVSITGFFQR-p Q15054;S458-p GKANRQVSITGFFQR 0.87463617951721 0.506954929539413 0.0633333333333333 -0.29 1.13802364485242 3.95337639776849 0.0633333333333333 -0.29 0.769480530120319 0.402404065929289 0.308150650657613 -0.908054432886853 Q15054 POLD3 Q15054.S458.p_POLD3 Q15054_S458s _1_1_458_458 Q15054 Q15054|Q15054-2 DNA polymerase delta subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26044.26044.3 11.41 11.41 2.43 2 1 1 0 497.9237 1411.7895 S458s TMT10 456 (R) QVsITGFFQR (K) QVS(0.99)IT(0.0)GFFQR s:Phosphorylated S POLD3 51684.7 1 3 2048.1 100.6 HUMAN 1 1.138 -3.9534 GKDKENGSVSSSETP-p P55010;S172-p GKDKENGSVSSSETP 0.630154689695046 0.110297147501293 0.0953333333333333 0.293333333333333 3.73065099177166 12.6417734209717 0.0953333333333333 0.293333333333333 0.423579468255366 0.0544280353150611 0.865279939670993 2.44541458632438 P55010 EIF5 P55010.S172.p_EIF5 P55010_S172s_1_1_172_172 P55010 P55010 Eukaryotic translation initiation factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16008.16008.4 20.43 16.56 1.268 8 1 1 0 1359.8417 5355.3618 N170n S172s TMT10 169 (K) EnGsVSSSETPPPPPPPNEINPPPHTMEEEEDDDWGEDTTEEAQRR (R) EN(0.99)GS(0.99)VS(0.0)S(0.0)S(0.0)ET(0.0)PPPPPPPN(0.0)EIN(0.0)PPPHT(0.0)MEEEEDDDWGEDT(0.0)T(0.0)EEAQRR n:Deamidated,s:Phosphorylated S EIF5 49678.3 8 3 980.1 192.67 HUMAN 1 3.7307 12.6418 GKDVNSSSPVMLAFK-p Q99598;S33-p GKDVNSSSPVMLAFK 0.472747504381845 0.73098397409132 -0.213666666666667 0.0546666666666667 5.99709878736785 1.87572377336745 -0.213666666666667 0.0546666666666666 0.251356500483421 0.649273417912982 -1.28404673668647 0.481046232677168 Q99598 TSNAX Q99598.S33.p_TSNAX Q99598_S33s _1_1_33_33 Q99598 Q99598|C4P0D8|C4P0D6|C4P0D4|Q9NRI2 Translin-associated protein X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25513.25513.2 13.49 13.49 1.402 3 1 1 0 966.9986 1853.0243 S33s TMT10 28 (K) DVNSSsPVMLAFK (S) DVNS(0.0)S(0.0)S(0.99)PVMLAFK K:TMT10,s:Phosphorylated S TSNAX 33226 7 2 2150.1 95.73 HUMAN 1 -5.9971 1.8757 GKEDNTDTDQEKKEE-p Q7Z4S6-5;T568-p GKEDNTDTDQEKKEE 0.137301954068809 0.123693656370657 -0.250666666666667 -0.23 17.6886870793735 11.9738997225538 -0.250666666666667 -0.23 0.0170267316767448 0.0634760696119927 -3.3995333664432 -2.32654810343607 Q7Z4S6 KIF21A Q7Z4S6.5.T568.p_KIF21A Q7Z4S6-5_T568t _1_1_568_568 Q7Z4S6-5 Q7Z4S6-4|Q7Z4S6-2|Q7Z4S6-5|Q7Z4S6-3 Isoform 5 of Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7179.7179.4 13.79 13.59 3.149 3 1 1 0 601.8028 2324.2185 T568t TMT10 558 (K) SVAGKEDNTDtDQEK (K) S(0.0)VAGKEDNT(0.0)DT(0.99)DQEK K:TMT10,t:Phosphorylated T KIF21A 184163.5 4 10 390.1 332.37 HUMAN 1 -17.6887 -11.9739 GKEGTAPSENGETKA-p Q15651;S78-p GKEGTAPSENGETKA 0.336382653845099 0.00439771247042566 -0.301 0.912333333333333 8.82031373584719 34.6335101707667 -0.301 0.912333333333333 0.13121051086651 0.000344071723517427 -1.77725886082515 7.96026581343924 Q15651 HMGN3 Q15651.S78.p_HMGN3 Q15651_S78s _1_1_78_78 Q15651 A0A087WZE9|Q15651 High mobility group nucleosome-binding domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6512.6512.3 18.03 18.03 4.581 3 1 1 0 834.0891 2420.2872 S78s TMT10 68 (K) QEAGKEGTAPsENGETK (A) QEAGKEGT(0.0)APS(0.99)ENGET(0.0)K K:TMT10,s:Phosphorylated S HMGN3 10665.7 10 5 1583.1 129.56 HUMAN 1 -8.8203 34.6335 GKEISPGSGPGEIRK-p O43491;S718-p GKEISPGSGPGEIRK 0.27136228544952 0.481872898791056 0.163666666666667 -0.113666666666667 10.7363007605145 4.23289151365253 0.163666666666667 -0.113666666666667 0.0844053400619024 0.377320888680488 2.10997296176617 -0.961223542571876 O43491 EPB41L2 O43491.S718.p_EPB41L2 O43491_S718s_1_1_718_718 O43491 O43491|E9PHY5|O43491-4|E9PK52|Q6R5J7 Band 4.1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19510.19510.4 18.74 18.74 2.951 3 1 1 0 685.5958 2658.4173 N710n S718s TMT10 704 (R) VITEEMnGKEISPGsGPGEIR (K) VIT(0.0)EEMN(1.0)GKEIS(0.0)PGS(0.99)GPGEIR K:TMT10,n:Deamidated,s:Phosphorylated S EPB41L2 113099.5 1 13 469.1 302.69 HUMAN 1 10.7363 -4.2329 GKEKERGSPLLGDHA-p Q9C073;S178-p GKEKERGSPLLGDHA 0.343164410890753 0.0221420189415373 0.318666666666667 -0.483333333333333 8.62670047400066 22.6026051970988 0.318666666666667 -0.483333333333333 0.137192368102055 0.00549211320287184 1.743743214343 -4.45622736574839 Q9C073 FAM117A Q9C073.S178.p_FAM117A Q9C073_S178s _1_1_178_178 Q9C073 Q9C073 Protein FAM117A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7312.7312.4 18.14 18.14 99 1 1 1 0 429.7254 1635.9128 S178s TMT10 175 (K) ERGsPLLGDHAVR (G) ERGS(1.0)PLLGDHAVR s:Phosphorylated S FAM117A 49059.4 2 5 640.1 255.25 HUMAN 1 8.6267 -22.6026 GKEKQRKTEELEEES-p Q9Y2W1;T487-p GKEKQRKTEELEEES 0.996943812735477 0.263146602893666 -0.00066666666666667 0.132666666666667 0.0232438966979973 7.63883547189591 -0.000666666666666671 0.132666666666667 0.994662191992283 0.172233034304653 -0.00700457397180426 1.57196329569083 Q9Y2W1 THRAP3 Q9Y2W1.T487.p_THRAP3 Q9Y2W1_T487t _1_1_487_487 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10976.10976.3 14.95 14.95 7.091 2 1 1 0 644.6335 1851.9174 T487t Hydrogen 486 (R) KtEELEEESFPER (S) KT(0.99)EELEEES(0.0)FPER K:TMT10-Lys-Only,t:Phosphorylated T THRAP3 108720.9 3 72 10.2 1293.04 HUMAN 1 -0.0232 7.6388 GKEPAKPSPSRDRKE-p Q15311;S645-p GKEPAKPSPSRDRKE 0.732621990036657 0.162135055402848 0.120333333333333 0.32 2.56172778469987 10.3888407883513 0.120333333333333 0.32 0.554405106142087 0.0914357267630984 0.629896406655712 2.04848888946768 Q15311 RALBP1 Q15311.S645.p_RALBP1 Q15311_S645s _1_1_645_645 Q15311 Q15311 RalA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5537.5537.3 7.12 7.12 7.121 2 1 1 0 664.7131 1912.1583 S645s TMT10 637 (K) AGKEPAKPsPSR (D) AGKEPAKPS(0.99)PS(0.0)R K:TMT10,s:Phosphorylated S RALBP1 76461.4 3 7 822.1 218.43 HUMAN 1 2.5617 10.3888 GKERRPDSPTRPTLR-p Q7RTP6;S1649-p GKERRPDSPTRPTLR 0.114050912851162 0.519153809318699 0.285333333333333 0.087 19.6461492359221 3.82500486640548 0.285333333333333 0.087 0.0108488842700464 0.414476119604225 3.80341834845012 0.883382907655558 Q7RTP6 MICAL3 Q7RTP6.S1649.p_MICAL3 Q7RTP6_S1649s _1_1_1649_1649 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4118.4118.2 12.82 12.82 1.337 3 1 1 0 688.346 1295.7179 S1649s Hydrogen 1646 (R) RPDsPTRPTLR (G) RPDS(0.99)PT(0.0)RPT(0.0)LR s:Phosphorylated S MICAL3 225431.9 5 19 190.1 466.81 HUMAN 1 19.6461 3.825 GKEYIIPSPGYRSVR-p O15440;S14-p GKEYIIPSPGYRSVR 0.842210684381321 0.110584241596108 0.03 -0.204666666666667 1.44102838407165 12.6255514860287 0.03 -0.204666666666667 0.717624341880672 0.0546317171745557 0.381118854371822 -2.44251291768464 O15440 ABCC5 O15440.S14.p_ABCC5 O15440_S14s _1_1_14_14 O15440 O15440|O15440-5|F8WCY8|A5PKY6|O15440-2|O15440-3 Multidrug resistance-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18981.18981.2 10.81 10.81 5.651 3 1 1 0 752.377 1423.7783 S14s TMT10 9 (K) EYIIPsPGYR (S) EY(0.0)IIPS(0.99)PGY(0.0)R s:Phosphorylated S ABCC5 161741.5 3 2 1666.1 122.51 HUMAN 1 1.441 -12.6256 GKFLKRFTDEESRVF-p Q9NYF8;T341-p GKFLKRFTDEESRVF 0.757858222190709 0.213144047955284 -0.059 0.137333333333333 2.30476541800525 8.83123274094888 -0.059 0.137333333333333 0.58819788449988 0.130881036563328 -0.575284575228451 1.77852222515935 Q9NYF8 BCLAF1 Q9NYF8.T341.p_BCLAF1 Q9NYF8_T341t _1_1_341_341 Q9NYF8 Q9NYF8|Q9NYF8-2 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18891.18891.4 12.48 12.48 4.327 2 1 1 0 523.7665 2012.0763 T341t TMT10 339 (K) RFtDEESRVFLLDR (G) RFT(0.99)DEES(0.0)RVFLLDR t:Phosphorylated T BCLAF1 106234.3 2 15 10.1 1293.04 HUMAN 1 -2.3048 8.8312 GKGDSCDSSEDKKSK-p P46100;S1076-p GKGDSCDSSEDKKSK 0.049158581421578 0.0100650858802549 0.590333333333333 0.429666666666667 28.9679888394806 28.0620769341081 0.590333333333333 0.429666666666667 0.00126823903467786 0.00156240027452757 6.12417426992729 5.85499908601541 P46100 ATRX P46100.S1076.p_ATRX P46100_S1073sS1076s_2_2_1073_1076 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6552.6552.3 7.73 7.73 1.408 5 2 2 0 893.0914 2517.3272 S1073s S1076s TMT10 1067 (K) STGKGDsCDsSEDKK (S) S(0.0)T(0.0)GKGDS(0.99)CDS(0.99)S(0.0)EDKK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ATRX 285034.2 2 53 18.1 1035.36 HUMAN 1 28.968 28.0621 GKGESAGYMEPYEAQ-p Q15464;Y268-p GKGESAGYMEPYEAQ 0.24333175644278 0.0493529123877039 -0.248 -0.69 11.7353636927537 17.4785374264393 -0.248 -0.69 0.0670600126048823 0.0178708931160436 -2.28548156213238 -3.35484256272028 Q15464 SHB Q15464.Y268.p_SHB Q15464_Y268y _1_1_268_268 Q15464 Q15464|Q15464-2 SH2 domain-containing adapter protein B GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11842.11925.3 18.92 18.92 4.072 3 1 1 0 794.7125 2302.1538 Y268y TMT10 260 (K) AGKGESAGyMEPYEAQR (I) AGKGES(0.0)AGY(0.99)MEPY(0.0)EAQR K:TMT10,y:Phosphorylated Y SHB 55783 3 1 186.1 18.92 HUMAN 1 -11.7354 -17.4785 GKGGVADSRELKPMA-p Q8WWI5;S644-p GKGGVADSRELKPMA 0.456329906764675 0.0407422869301869 -0.132333333333333 0.262666666666667 6.28391414532627 18.6322518765272 -0.132333333333333 0.262666666666667 0.235292771596334 0.0137017112939715 -1.33498697972013 3.58830181478318 Q8WWI5 SLC44A1 Q8WWI5.S644.p_SLC44A1 Q8WWI5_S644s _1_1_644_644 Q8WWI5 Q8WWI5 Choline transporter-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12304.12304.3 7.58 7.58 1.22 4 1 1 0 777.0582 2249.196 S644s TMT10 639 (K) GGVADsRELKPMASGASSA (-) GGVADS(0.99)RELKPMAS(0.0)GAS(0.0)S(0.0)A K:TMT10,s:Phosphorylated S SLC44A1 74841.2 7 1 4083.1 37.95 HUMAN 1 -6.2839 18.6323 GKGGVTGSPEASISG-p Q09666;S5731-p GKGGVTGSPEASISG 0.392704789566549 0.0213404996074559 0.118 0.319333333333333 7.48624735893486 22.8452375088815 0.118 0.319333333333333 0.178391954648494 0.00519369269234684 1.54588803970099 4.51292620713862 Q09666 AHNAK Q09666.S5731.p_AHNAK Q09666_S5731s _1_1_5731_5731 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15074.15074.2 19.75 14.41 2.277 5 1 1 0 1257.6735 2434.3756 S5731s TMT10 5726 (K) GGVTGsPEASISGSKGDLK (S) GGVT(0.0)GS(0.99)PEAS(0.0)IS(0.0)GS(0.0)KGDLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 36 154 1.1 4313.36 HUMAN 1 7.4862 22.8452 GKGIAPASPMLGNAS-p J3KNR0;S492-p GKGIAPASPMLGNAS 0.960420214725763 0.16218418394256 0.00833333333333333 -0.142666666666667 0.337225586227791 10.3869175915992 0.00833333333333335 -0.142666666666667 0.925289089800874 0.0914762264336228 0.0982256587714529 -2.04815417722617 J3KNR0 NotFound J3KNR0.S492.p_NotFound J3KNR0_S492s _1_1_492_492 J3KNR0 P27448-4|P27448-3|P27448-6|A0A0A0MQR8|P27448-8|A0A0A0MST9|J3KNR0|P27448-7|A0A0A0MT23|P27448-2|A0A0A0MSZ1 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17947.18019.4 19.05 19.05 9.588 2 1 1 0 715.3703 2778.4973 S492s TMT10 487 (K) GIAPAsPMLGNASNPNKADIPER (K) GIAPAS(0.99)PMLGNAS(0.0)NPNKADIPER K:TMT10,s:Phosphorylated S MARK3 87513.5 23 34 200.3 451.67 HUMAN 1 0.3372 -10.3869 GKGKRRRSSDEDAAG-p Q9BUI4;S204-p GKGKRRRSSDEDAAG 0.452539343805441 0.0193383719151726 0.187 0.346333333333333 6.35299083837063 23.5443615909125 0.187 0.346333333333333 0.231579928849838 0.00442144106895536 1.3472111933195 4.67890450032569 Q9BUI4 POLR3C Q9BUI4.S204.p_POLR3C Q9BUI4_S204sS205s_2_2_204_205 Q9BUI4 Q9BUI4|E9PHH9 DNA-directed RNA polymerase III subunit RPC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3007.3007.3 11.08 11.08 99 2 2 2 0 602.9266 1646.8295 S204s S205s Hydrogen 202 (R) RRssDEDAAGEPK (A) RRS(1.0)S(1.0)DEDAAGEPK K:TMT10-Lys-Only,s:Phosphorylated S POLR3C 61009.9 3 3 3104.1 60.54 HUMAN 1 6.353 23.5444 GKGQRRMSDPESVSS-p Q86WK6;S477-p GKGQRRMSDPESVSS 0.702741438019784 0.704154488403536 0.056 -0.0366666666666666 2.87963801128881 2.09258949989986 0.056 -0.0366666666666666 0.515271591184529 0.617648014985281 0.695857567650278 -0.529147900035303 Q86WK6 AMIGO1 Q86WK6.S477.p_AMIGO1 Q86WK6_S477s _1_1_477_477 Q86WK6 Q86WK6 Amphoterin-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.31138.31138.3 16 16 3.841 6 1 1 0 787.7124 2281.1583 S477s TMT10 475 (R) RMsDPESVSSVFSDTPIVV (-) RMS(0.99)DPES(0.0)VS(0.0)S(0.0)VFS(0.0)DT(0.0)PIVV s:Phosphorylated S AMIGO1 56094 4 1 5825.1 16 HUMAN 1 2.8796 -2.0926 GKGSDSDSEGDNPEK-p Q9UN37;S99-p GKGSDSDSEGDNPEK 0.276322361958096 0.0233345838309503 -0.322666666666667 0.309 10.5629210460516 22.272634344006 -0.322666666666667 0.309 0.0878431488841284 0.00592565776921464 -2.0797017382548 4.3798480878948 Q9UN37 VPS4A Q9UN37.S99.p_VPS4A Q9UN37_S97sS99s_2_2_97_99 Q9UN37 Q9UN37 Vacuolar protein sorting-associated protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7602.7602.4 14.27 12.76 2.862 4 2 2 0 739.8225 2796.3375 S97s S99s TMT10 87 (K) ENQSEGKGSDsDsEGDNPEK (K) ENQS(0.0)EGKGS(0.0)DS(0.99)DS(0.99)EGDNPEK K:TMT10,s:Phosphorylated S VPS4A 49182.3 12 3 1671.1 122.19 HUMAN 2 -10.5629 22.2726 GKGSKSPSPRPNMPV-p Q9H6S0;S1281-p GKGSKSPSPRPNMPV 0.747438924126419 0.171759603290681 0.0743333333333333 0.288 2.40134951023949 10.0584118108215 0.0743333333333333 0.288 0.575261155086975 0.0986640228149848 0.595957099651794 1.99104997783479 Q9H6S0 YTHDC2 Q9H6S0.S1281.p_YTHDC2 Q9H6S0_S1281s _1_1_1281_1281 Q9H6S0 Q9H6S0 Probable ATP-dependent RNA helicase YTHDC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7173.7173.3 10.56 5.9 10.562 2 1 1 0 516.2637 1466.8099 S1281s TMT10 1279 (K) SPsPRPNMPVR (Y) S(0.0)PS(0.99)PRPNMPVR s:Phosphorylated S YTHDC2 161671.9 3 16 668.1 249.65 HUMAN 1 2.4013 10.0584 GKGTGPPSPTKDRKK-p Q7L8A9;S313-p GKGTGPPSPTKDRKK 0.177143878244816 0.0621773708295257 0.320666666666667 -0.358666666666667 14.9012208998061 16.0571771795688 0.320666666666667 -0.358666666666667 0.0323502700234957 0.0247903285195321 2.85994551926117 -3.07699278059505 Q7L8A9 VASH1 Q7L8A9.S313.p_VASH1 Q7L8A9_S313s _1_1_313_313 Q7L8A9 Q7L8A9 Vasohibin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7294.7294.3 9.85 9.85 9.848 3 1 1 0 460.5829 1299.7673 S313s TMT10 308 (K) GTGPPsPTK (D) GT(0.0)GPPS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S VASH1 41070 4 1 4942.1 24.85 HUMAN 1 14.9012 -16.0572 GKGVARLSAEAEKVL-p Q15149;S1181-p GKGVARLSAEAEKVL 0.733466464014547 0.221851010442893 0.111333333333333 -0.170333333333333 2.54861299836956 8.61138391310509 0.111333333333333 -0.170333333333333 0.556081824170185 0.137677068031313 0.627138566442478 -1.74049481085242 Q15149 PLEC Q15149.S1181.p_PLEC Q15149_S1181s _1_1_1181_1181 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10076.10076.3 9.87 9.87 99 1 1 1 0 556.9768 1588.9423 S1181s TMT10 1176 (K) GVARLsAEAEK (V) GVARLS(1.0)AEAEK K:TMT10,s:Phosphorylated S PLEC 533778 1 12 44.1 794.85 HUMAN 1 2.5486 -8.6114 GKHDYDDSSEEQSAE-p A0A0A0MR66;S125-p GKHDYDDSSEEQSAE 0.363292279428815 0.00827722160832736 0.127666666666667 0.5505 8.16581894069569 29.6110738494776 0.127666666666667 0.5505 0.152552070319834 0.00109368590480001 1.66391412434654 6.30483578501496 A0A0A0MR66 RBM10 A0A0A0MR66.S125.p_RBM10 A0A0A0MR66_S125sS126s_2_2_125_126 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8988.8988.3 18.58 18.58 1.173 11 2 2 0 1396.208 4026.6707 S125s S126s Hydrogen 112 (R) EYGSQEGKHDYDDssEEQSAEDSYEASPGSETQR (R) EY(0.0)GS(0.0)QEGKHDY(0.0)DDS(0.99)S(0.99)EEQS(0.0)AEDS(0.0)Y(0.0)EAS(0.0)PGS(0.0)ET(0.0)QR K:TMT10-Lys-Only,s:Phosphorylated S RBM10 110706.4 8 18 270.1 394.36 HUMAN 2 8.1658 29.6111 GKHGEKQTPDTLKGT-p Q9UK61-2;T544-p GKHGEKQTPDTLKGT 0.994119531161693 0.339623007654848 0.00133333333333333 0.108333333333333 0.0518969943731407 6.21261239257735 0.0013333333333333 0.108333333333333 0.988121389849341 0.23918765485634 0.0155883819083515 1.32202664849693 Q9UK61 FAM208A Q9UK61.2.T544.p_FAM208A Q9UK61-2_T544t _1_1_544_544 Q9UK61-2 Q9UK61-2 Isoform 2 of Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6469.6469.4 11.83 9.21 4.591 2 1 1 0 506.0321 1941.1372 T544t TMT10 539 (K) HGEKQtPDTLK (G) HGEKQT(0.99)PDT(0.0)LK K:TMT10,t:Phosphorylated T FAM208A 141136.8 1 24 246.2 411.17 HUMAN 1 0.0519 6.2126 GKHGGNVSLDVLPVK-p Q8TEP8-3;S2098-p GKHGGNVSLDVLPVK 0.22320926423064 0.00757832271339655 0.257333333333333 -0.620666666666667 12.520485720906 30.2972419480618 0.257333333333333 -0.620666666666667 0.0559695000937848 0.000933847166106254 2.42500927368676 -6.51261452977318 Q8TEP8 NotFound Q8TEP8.3.S2098.p_NotFound Q8TEP8-3_S2098sS2110s_2_2_2098_2110 Q8TEP8-3 Q8TEP8-3|A0A0A0MR42 Isoform 3 of Centrosomal protein of 192 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23744.23744.4 13.65 11.17 2.203 3 2 2 0 737.1423 2785.6089 S2098s S2110s TMT10 2093 (K) HGGNVsLDVLPVKGPQGsPLLSR (A) HGGNVS(0.99)LDVLPVKGPQGS(0.99)PLLS(0.0)R K:TMT10,s:Phosphorylated S CEP192 281787.5 1 22 491.1 293.99 HUMAN 1 12.5205 -30.2972 GKHLDMGSPQLRTRD-p Q76N32;S435-p GKHLDMGSPQLRTRD 0.174901091255702 0.70992040300171 0.233333333333333 0.036 15.0848586195454 2.04708764052634 0.233333333333333 0.036 0.0310108833988244 0.624153249565697 2.89438168221922 0.519144066107232 Q76N32 CEP68 Q76N32.S435.p_CEP68 Q76N32_S435s _1_1_435_435 Q76N32 Q76N32|Q76N32-2|Q5HYA6 Centrosomal protein of 68 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11041.11041.3 11.87 11.87 99 1 1 1 0 488.2405 1382.7412 S435s TMT10 430 (K) HLDMGsPQLR (T) HLDMGS(1.0)PQLR s:Phosphorylated S CEP68 82013.7 2 4 2056.1 100.31 HUMAN 1 15.0849 2.0471 GKHMDFLSDFEMMLQ-p Q96ST2;S527-p GKHMDFLSDFEMMLQ 0.4319622910657 0.192285735491335 0.125333333333333 0.144666666666667 6.71149548979762 9.41361491007404 0.125333333333333 0.144666666666667 0.213231052717726 0.114455985464754 1.41041137606005 1.87927879262609 Q96ST2 IWS1 Q96ST2.S527.p_IWS1 Q96ST2_S527s _1_1_527_527 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36434.36434.3 18.53 18.53 99 1 1 1 0 703.6453 2028.9543 S527s TMT10 522 (K) HMDFLsDFEMMLQR (K) HMDFLS(1.0)DFEMMLQR s:Phosphorylated S IWS1 92010 2 10 230.1 422.87 HUMAN 1 6.7115 9.4136 GKHQPWQSPERPLSR-p Q9BQ52;S199-p GKHQPWQSPERPLSR 0.199418709267342 0.0107551853040564 -0.231666666666667 -0.443333333333333 13.6234702218525 27.5919818319276 -0.231666666666667 -0.443333333333333 0.0434163168273517 0.00174101220960651 -2.62404321623479 -5.72351685968993 Q9BQ52 ELAC2 Q9BQ52.S199.p_ELAC2 Q9BQ52_S199s _1_1_199_199 Q9BQ52 Q9BQ52|G5E9D5|Q9BQ52-2 Zinc phosphodiesterase ELAC protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7884.7884.4 13.2 11.84 4.301 2 1 1 0 586.0641 2261.2667 S199s TMT10 192 (R) GKHQPWQsPERPLSR (L) GKHQPWQS(0.99)PERPLS(0.0)R K:TMT10,s:Phosphorylated S ELAC2 93472.6 2 1 3791.1 43.02 HUMAN 1 -13.6235 -27.592 GKIAELLSPGSVDPL-p A0A087X1N8;S170-p GKIAELLSPGSVDPL 0.289498276160622 0.11082517947007 -0.18 0.264666666666667 10.1507788137775 12.612442582669 -0.18 0.264666666666667 0.0965877654067854 0.054796868670519 -2.00791849547478 2.44016864027877 A0A087X1N8 SERPINB6 A0A087X1N8.S170.p_SERPINB6 A0A087X1N8_S170s _1_1_170_170 A0A087X1N8 A0A087X1N8|A0A024QZX5|P35237 Serpin B6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.31406.31406.3 12.79 12.79 3.337 3 1 1 0 626.3364 1797.0319 S170s TMT10 165 (K) IAELLsPGSVDPLTR (L) IAELLS(0.99)PGS(0.0)VDPLT(0.0)R s:Phosphorylated S SERPINB6 45164 1 2 4451.1 31.19 HUMAN 1 -10.1508 12.6124 GKIEVLDSPASKKKK-p Q8N5I9;S178-p GKIEVLDSPASKKKK 0.636657897799904 0.00116489549050732 -0.097 -1.01433333333333 3.65789953354858 48.6392377474341 -0.0970000000000001 -1.01433333333333 0.430734885166804 1.36796890377957e-05 -0.851144567259431 -14.7938502534649 Q8N5I9 C12orf45 Q8N5I9.S178.p_C12orf45 Q8N5I9_S178s _1_1_178_178 Q8N5I9 Q8N5I9 Uncharacterized protein C12orf45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15872.15872.3 14.41 14.41 2.87 2 1 1 0 671.0524 1931.178 S178s TMT10 171 (K) GKIEVLDsPASK (K) GKIEVLDS(0.99)PAS(0.0)K K:TMT10,s:Phosphorylated S C12orf45 20180 10 6 1631.1 125.15 HUMAN 1 -3.6579 -48.6392 GKIGLPHSIKLSRRR-p Q14498;S117-p GKIGLPHSIKLSRRR 0.64009150118223 0.32029773994645 0.103 -0.117 3.61952172155594 6.53898023674571 0.103 -0.117 0.434558078410164 0.221871733380859 0.84366428664557 -1.37969107155686 Q14498 RBM39 Q14498.S117.p_RBM39 Q14498_S117s _1_1_117_117 Q14498 Q14498|Q14498-2|G3XAC6 RNA-binding protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17093.17093.3 15.05 11.43 99 1 1 1 0 468.2786 1322.856 S117s TMT10 112 (K) IGLPHsIK (L) IGLPHS(1.0)IK K:TMT10,s:Phosphorylated S RBM39 59663.8 4 4 915.1 200.83 HUMAN 1 3.6195 -6.539 GKIHRSATDADVVNS-p Q92538-3;T1337-p GKIHRSATDADVVNS 0.832987870919974 0.171478310548914 0.0846666666666667 0.315 1.53178775627719 10.0674183705001 0.0846666666666667 0.315 0.702782962469097 0.0984596217338786 0.402421533897691 1.99261388902825 Q92538 GBF1 Q92538.3.T1337.p_GBF1 Q92538-3_T1337t _1_1_1337_1337 Q92538-3 Q92538|Q92538-2|Q92538-3 Isoform 3 of Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28209.28209.2 17.03 17.03 2.493 3 1 1 0 1128.5887 2176.2014 T1337t TMT10 1335 (R) SAtDADVVNSGWLVVGK (D) S(0.0)AT(0.99)DADVVNS(0.0)GWLVVGK K:TMT10,t:Phosphorylated T GBF1 208066.7 5 10 543.1 276.05 HUMAN 1 1.5318 10.0674 GKIPSAVSTVSMQNI-p P19634;S602-p GKIPSAVSTVSMQNI 0.893124510936072 0.328137084282773 0.0246666666666667 0.0973333333333333 0.960610908854431 6.40821167306265 0.0246666666666666 0.0973333333333334 0.801565301700997 0.228654015532513 0.263968694088725 1.35662832066506 P19634 SLC9A1 P19634.S602.p_SLC9A1 P19634_S602sT603t_2_2_602_603 P19634 P19634 Sodium/hydrogen exchanger 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26178.26178.5 13.77 10.11 1.174 5 2 2 0 775.2031 3696.0432 S602s T603t M606m TMT10 584 (K) QAIELVESGGMGKIPSAVstVSmQNIHPK (S) Q(0.0)AIELVES(0.0)GGM(0.0)GKIPS(0.0)AVS(0.99)T(0.99)VS(0.0)M(0.99)QN(0.0)IHPK K:TMT10,s:Phosphorylated S,t:Phosphorylated T,m:Oxidized methionine SLC9A1 91274.8 17 10 732.1 235.73 HUMAN 1 0.9606 6.4082 GKIRRTQSGNFYTDT-p Q8ND30;S512-p GKIRRTQSGNFYTDT 0.304976045038192 0.972251385705421 0.154666666666667 -0.00366666666666663 9.66492572227296 0.17256942027708 0.154666666666667 -0.00366666666666663 0.108020809560798 0.961043527124522 1.92355079857476 -0.0511421226959589 Q8ND30 PPFIBP2 Q8ND30.S512.p_PPFIBP2 Q8ND30_S512s _1_1_512_512 Q8ND30 Q8ND30|Q8ND30-2|Q8ND30-3|E9PP16 Liprin-beta-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27394.27394.2 13.05 13.05 3.51 5 1 1 0 1124.004 2167.0327 S512s TMT10 510 (R) TQsGNFYTDTLGMAEFR (R) T(0.0)QS(0.99)GNFY(0.0)T(0.0)DT(0.0)LGMAEFR s:Phosphorylated S PPFIBP2 99112.4 8 5 1287.1 158.1 HUMAN 1 9.6649 -0.1726 GKKARAVSPLDPSKE-p Q14865;S1032-p GKKARAVSPLDPSKE 0.341244205876587 0.0156955025201609 0.157333333333333 0.367666666666667 8.68096624293258 24.941444144456 0.157333333333333 0.367666666666667 0.135488793568226 0.00320520333207498 1.7531374557618 5.02271180419524 Q14865 ARID5B Q14865.S1032.p_ARID5B Q14865_S1032s _1_1_1032_1032 Q14865 Q14865|Q14865-2 AT-rich interactive domain-containing protein 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16641.16641.3 13.03 9.53 13.027 3 1 1 0 727.7438 2101.2472 S1032s TMT10 1030 (R) AVsPLDPSKEVSGK (E) AVS(0.99)PLDPS(0.0)KEVS(0.0)GK K:TMT10,s:Phosphorylated S ARID5B 133513.4 4 10 1262.1 160.88 HUMAN 1 8.681 24.9414 GKKDARQTPKKPEAK-p O76021;T454-p GKKDARQTPKKPEAK 0.690693421685413 0.00230842523947764 0.101 -0.740333333333333 3.01293828631314 40.6125145286065 0.101 -0.740333333333334 0.499696343315921 8.68457454112859e-05 0.723038987092194 -10.4103260331153 O76021 RSL1D1 O76021.T454.p_RSL1D1 O76021_T454t_1_1_454_454 O76021 O76021|O76021-2 Ribosomal L1 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7585.7585.3 7.46 7.46 99 1 1 1 0 593.0131 1714.083 Q453q T454t Hydrogen 453 (R) qtPKKPEAK (F) Q(1.0)T(1.0)PKKPEAK K:TMT10-Lys-Only,q:Pyroglutamic acid,t:Phosphorylated T RSL1D1 55199.7 1 11 643.1 254.92 HUMAN 1 3.0129 -40.6125 GKKESLESEAELEGL-p Q8IV38;S422-p GKKESLESEAELEGL 0.288149464288374 0.53105118318972 0.157333333333333 0.0993333333333334 10.1935048662249 3.69569716116762 0.157333333333333 0.0993333333333333 0.0956421903110411 0.427002368405201 2.01534982408741 0.858358321073204 Q8IV38 ANKMY2 Q8IV38.S422.p_ANKMY2 Q8IV38_S422s _1_1_422_422 Q8IV38 Q8IV38 Ankyrin repeat and MYND domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25634.25634.3 15.12 15.12 2.674 3 1 1 0 941.7643 2743.2995 S422s TMT10 418 (K) ESLEsEAELEGLQDAPAGPQVSEE (-) ES(0.0)LES(0.99)EAELEGLQDAPAGPQVS(0.0)EE s:Phosphorylated S ANKMY2 50324.8 1 1 5943.1 15.12 HUMAN 1 10.1935 3.6957 GKKKRKESPSSTGSS-p Q6NV74;S45-p GKKKRKESPSSTGSS 0.555476059489065 0.811069973749858 0.0886666666666667 0.0326666666666667 4.71435991407063 1.27501318337994 0.0886666666666667 0.0326666666666667 0.337725620743045 0.745587608729477 1.05144313020181 0.341472756737825 Q6NV74 KIAA1211L Q6NV74.S45.p_KIAA1211L Q6NV74_S45s _1_1_45_45 Q6NV74 Q6NV74 Uncharacterized protein KIAA1211-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7431.7431.4 8.34 6.99 1.112 7 1 1 0 666.3731 2582.5072 S45s TMT10 41 (K) KRKEsPSSTGSSTWK (Q) KRKES(0.99)PS(0.0)S(0.0)T(0.0)GS(0.0)S(0.0)T(0.0)WK K:TMT10,s:Phosphorylated S KIAA1211L 102725.9 4 1 756.1 230.87 HUMAN 1 4.7144 1.275 GKKPAATSPLSPMAN-p Q86UU1;S220-p GKKPAATSPLSPMAN 0.699407107617201 0.0376642237117902 -0.0526666666666667 -0.395 2.91832248144614 19.1321347234446 -0.0526666666666667 -0.395 0.510702227216488 0.0122119924648782 -0.703773282220488 -3.69185795025775 Q86UU1 PHLDB1 Q86UU1.S220.p_PHLDB1 Q86UU1_S220s _1_1_220_220 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3|A0A087WXY7 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12147.12147.3 10.92 10.92 1.1 3 1 1 0 698.371 2013.1316 S220s TMT10 215 (K) KPAATsPLSPMANGGR (Y) KPAAT(0.0)S(0.99)PLS(0.0)PMANGGR K:TMT10,s:Phosphorylated S PHLDB1 152129.1 11 1 99.1 600.41 HUMAN 1 -2.9183 -19.1321 GKKPGIVSPFKRVFL-p Q9BSQ5;S15-p GKKPGIVSPFKRVFL 0.23797684518109 0.0456214631327194 -0.460666666666667 -0.271666666666667 11.9291372500587 17.9440151362951 -0.460666666666667 -0.271666666666667 0.0641336969057259 0.0160545629135742 -2.31977179772768 -3.44813206524351 Q9BSQ5 CCM2 Q9BSQ5.S15.p_CCM2 Q9BSQ5_S15s _1_1_15_15 Q9BSQ5 Q9BSQ5|Q9BSQ5-3|E9PEC4 Cerebral cavernous malformations 2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17765.17765.3 9.93 9.93 99 1 1 1 0 580.6866 1660.0765 S15s TMT10 10 (K) KPGIVsPFK (R) KPGIVS(1.0)PFK K:TMT10,s:Phosphorylated S CCM2 49292.3 1 1 2227.1 92.63 HUMAN 1 -11.9291 -17.944 GKKRKRVSDDVPDCK-p Q9NV88;S572-p GKKRKRVSDDVPDCK 0.841988968990361 0.233898731774781 -0.0333333333333334 0.119666666666667 1.44492986402433 8.30836778743115 -0.0333333333333334 0.119666666666667 0.716979954286732 0.147626125352546 -0.382039572659015 1.68805937304464 Q9NV88 INTS9 Q9NV88.S572.p_INTS9 Q9NV88_S572s _1_1_572_572 Q9NV88 Q9NV88|Q9NV88-2|Q9NV88-3 Integrator complex subunit 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8962.8962.3 12.4 12.4 99 1 1 1 0 576.9512 1648.8729 S572s TMT10 570 (K) RVsDDVPDCK (V) RVS(1.0)DDVPDCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S INTS9 74840.1 4 2 4462.1 31 HUMAN 1 -1.4449 8.3084 GKKRLEKSPSFASEW-p Q92625;S661-p GKKRLEKSPSFASEW 0.133193225254061 0.666019854457607 0.364333333333333 -0.057 18.037547166723 2.41530013933013 0.364333333333333 -0.057 0.0157124997334913 0.573416236589911 3.46986808935989 -0.598853073254089 Q92625 ANKS1A Q92625.S661.p_ANKS1A Q92625_S661s _1_1_661_661 Q92625 Q92625 Ankyrin repeat and SAM domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25997.25997.3 16.31 16.31 1.242 3 1 1 0 688.3317 1983.0111 S661s TMT10 661 (K) sPSFASEWDEIEK (I) S(0.99)PS(0.0)FAS(0.0)EWDEIEK K:TMT10,s:Phosphorylated S ANKS1A 124075.6 5 8 709.1 238.85 HUMAN 1 18.0375 -2.4153 GKKSPAKSPNPSTPR-p O76021;S396-p GKKSPAKSPNPSTPR 0.893227868895247 0.003348748305798 0.021 -0.679666666666667 0.95917107162166 37.0341698502371 0.021 -0.679666666666667 0.801831092529842 0.000197962538858041 0.263605329458834 -8.87411602956784 O76021 RSL1D1 O76021.S396.p_RSL1D1 O76021_S396s _1_1_396_396 O76021 O76021|O76021-2 Ribosomal L1 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5067.5067.3 8.59 4.6 1.221 4 1 1 0 712.0719 2054.2325 S396s TMT10 391 (K) KSPAKsPNPSTPR (G) KS(0.0)PAKS(0.99)PNPS(0.0)T(0.0)PR K:TMT10,s:Phosphorylated S RSL1D1 55199.7 4 5 643.1 254.92 HUMAN 1 0.9592 -37.0342 GKKTESASVQGRNTD-p Q9P2E9;S604-p GKKTESASVQGRNTD 0.189469922667285 0.496116465833135 -0.214 0.092 14.1399387455934 4.07153411944587 -0.214 0.0920000000000001 0.0385483794625151 0.391603521056102 -2.71864782785233 0.930619241374428 Q9P2E9 RRBP1 Q9P2E9.S604.p_RRBP1 Q9P2E9_S604s _1_1_604_604 Q9P2E9 Q9P2E9|A0A0A0MRV0|Q9P2E9-2|A0A087WVV2 Ribosome-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3969.3969.3 11.07 3.29 2.439 3 1 1 0 534.2868 1520.8797 S604s TMT10 599 (K) KTESAsVQGR (N) KT(0.0)ES(0.0)AS(0.99)VQGR K:TMT10,s:Phosphorylated S RRBP1 152868.9 3 12 479.1 299.08 HUMAN 1 -14.1399 4.0715 GKKTKFASDDEHDEH-p P05455;S366-p GKKTKFASDDEHDEH 0.656414826447476 0.0689224838281933 0.0803333333333333 0.242666666666667 3.4307475661085 15.4503208665327 0.0803333333333333 0.242666666666667 0.453863484834857 0.0285080763564199 0.806622700854429 2.96133969263313 P05455 SSB P05455.S366.p_SSB P05455_S366s _1_1_366_366 P05455 P05455 Lupus La protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7135.7135.3 23.68 23.68 15.016 2 1 1 0 955.4342 2784.3225 S366s TMT10 364 (K) FAsDDEHDEHDENGATGPVKR (A) FAS(0.99)DDEHDEHDENGAT(0.0)GPVKR K:TMT10,s:Phosphorylated S SSB 47007.4 89 2 1184.1 168.81 HUMAN 1 3.4307 15.4503 GKKYDSDSDDD____-p O14530;S223-p GKKYDSDSDDD____ 0.0941179808048868 0.985018787956548 0.344333333333333 0.00233333333333335 21.826593337315 0.0969355712587254 0.344333333333333 0.00233333333333336 0.00656660157143777 0.977927013420924 4.28238787699941 0.0289672985538303 O14530 TXNDC9 O14530.S223.p_TXNDC9 O14530_S223s _1_1_223_223 O14530 O14530 Thioredoxin domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6679.6679.2 8.1 8.1 2.54 3 1 1 0 799.3351 1517.7008 S223s TMT10 218 (K) KYDSDsDDD (-) KY(0.0)DS(0.0)DS(0.99)DDD K:TMT10,s:Phosphorylated S TXNDC9 26704.7 3 2 3505.1 49.53 HUMAN 1 21.8266 0.0969 GKLAAAKSLDFFRSM-p Q6P3S1;S590-p GKLAAAKSLDFFRSM 0.134150744259901 0.0124943875935368 2.00733333333333 -1.746 17.9455125187547 26.554274673177 2.00733333333333 -1.746 0.0160490284943965 0.00221091747670391 3.45124647753996 -5.44115900418333 Q6P3S1 DENND1B Q6P3S1.S590.p_DENND1B Q6P3S1_S590s _1_1_590_590 Q6P3S1 Q6P3S1 DENN domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25079.25079.3 11.06 11.06 99 1 1 1 0 592.9995 1697.015 S590s TMT10 585 (K) LAAAKsLDFFR (S) LAAAKS(1.0)LDFFR K:TMT10,s:Phosphorylated S DENND1B 87405.8 1 1 1975.1 104.63 HUMAN 1 17.9455 -26.5543 GKLCIEVTPQSKIAW-p P61221;T42-p GKLCIEVTPQSKIAW 0.717231801732979 0.567117469582556 0.071 -0.075 2.7231356822212 3.32206622704639 0.071 -0.075 0.53417853387034 0.46536463600737 0.663594296664638 -0.784984565714462 P61221 ABCE1 P61221.T42.p_ABCE1 P61221_T42t _1_1_42_42 P61221 P61221|D6R9I9 ATP-binding cassette sub-family E member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20158.20158.3 11.42 11.42 7.117 2 1 1 0 571.64 1632.9395 T42t TMT10 37 (K) LCIEVtPQSK (I) LCIEVT(0.99)PQS(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ABCE1 68283 1 1 4358.1 32.8 HUMAN 1 2.7231 -3.3221 GKLEAIITPPPAKKA-p O75367;T129-p GKLEAIITPPPAKKA 0.853435812905168 0.00195162346428314 0.0313333333333333 -0.781666666666667 1.33397014601577 42.3785967280375 0.0313333333333333 -0.781666666666667 0.735534394011811 5.78282869270297e-05 0.355673531980171 -11.2547395029019 O75367 H2AFY O75367.T129.p_H2AFY O75367_T129t _1_1_129_129 O75367 O75367|O75367-3|O75367-2|D6RCF2 Core histone macro-H2A.1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19207.19620.3 20.55 20.55 99 1 1 1 0 701.4255 2022.293 T129t TMT10 122 (K) GKLEAIItPPPAK (K) GKLEAIIT(1.0)PPPAK K:TMT10,t:Phosphorylated T H2AFY 39787.5 10 1 1399.1 146.47 HUMAN 1 1.334 -42.3786 GKLKAGQSVIGLQMG-p Q15417;S162-p GKLKAGQSVIGLQMG 0.309225914345461 0.350530254172156 -0.142666666666667 0.0913333333333334 9.52945994369904 6.03649477301571 -0.142666666666667 0.0913333333333334 0.111443310758407 0.249086690665012 -1.90006424824387 1.29075342458871 Q15417 CNN3 Q15417.S162.p_CNN3 Q15417_S162s _1_1_162_162 Q15417 Q15417|Q15417-2 Calponin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20224.20224.3 17.01 17.01 8.366 2 1 1 0 648.0136 1862.057 S162s TMT10 159 (K) AGQsVIGLQMGTNK (C) AGQS(0.99)VIGLQMGT(0.0)NK K:TMT10,s:Phosphorylated S CNN3 36584.2 1 7 1713.1 119.85 HUMAN 1 -9.5295 6.0365 GKLLGQDTFWVTEPE-p Q86VW2-3;T399-p GKLLGQDTFWVTEPE 0.766186662098155 0.232358066884507 0.0416666666666667 -0.185666666666667 2.21904496263666 8.3482565858817 0.0416666666666667 -0.185666666666667 0.599922988103336 0.146276426275059 0.556782659984563 -1.6949643312147 Q86VW2 ARHGEF25 Q86VW2.3.T399.p_ARHGEF25 Q86VW2-3_T389tT399tT403t_3_3_389_403 Q86VW2-3 Q86VW2-3|Q86VW2-2 Isoform 3 of Rho guanine nucleotide exchange factor 25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29486.29486.3 7.8 2.37 6.963 5 3 3 0 1115.1992 3103.6625 T389t T399t T403t Hydrogen 388 (K) LtAQGKLLGQDtFWVtEPEAGGLLSSR (G) LT(0.99)AQGKLLGQDT(0.99)FWVT(0.99)EPEAGGLLS(0.0)S(0.0)R K:TMT10-Lys-Only,t:Phosphorylated T ARHGEF25 68683.5 1 2 5110.1 22.88 HUMAN 1 2.219 -8.3483 GKLLKQKSEEPSVSI-p Q5SW79;S446-p GKLLKQKSEEPSVSI 0.607120974954459 0.280828985184464 -0.0776666666666667 -0.197 4.01062136383344 7.2684578978367 -0.0776666666666667 -0.197 0.397134725627667 0.187566040335655 -0.91915934736981 -1.50749572014125 Q5SW79 CEP170 Q5SW79.S446.p_CEP170 Q5SW79_S446s _1_1_446_446 Q5SW79 Q5SW79 Centrosomal protein of 170 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32014.32014.4 17.39 17.39 3.503 4 1 1 0 671.1237 2601.5016 S446s TMT10 444 (K) QKsEEPSVSIPFLQTALLR (S) QKS(0.99)EEPS(0.0)VS(0.0)IPFLQT(0.0)ALLR K:TMT10,s:Phosphorylated S CEP170 175689.3 5 9 128.1 537.52 HUMAN 1 -4.0106 -7.2685 GKLLRSHSQASLAGP-p Q9P2M7;S131-p GKLLRSHSQASLAGP 0.256626955344017 0.905242706410178 0.210333333333333 -0.0183333333333333 11.2199428772111 0.603210835285328 0.210333333333333 -0.0183333333333333 0.0755102159465023 0.870319905259809 2.19468715134651 -0.171139170725002 Q9P2M7 CGN Q9P2M7.S131.p_CGN Q9P2M7_S131s _1_1_131_131 Q9P2M7 Q9P2M7|Q9P2M7-2 Cingulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8018.8018.3 21.83 21.83 1.14 4 1 1 0 696.0019 2006.0253 S131s TMT10 129 (R) SHsQASLAGPGPVDPSNR (S) S(0.0)HS(0.99)QAS(0.0)LAGPGPVDPS(0.0)NR s:Phosphorylated S CGN 136611.7 9 4 239.1 416.31 HUMAN 1 11.2199 -0.6032 GKLNLSPSQYINEEN-p Q8NG31;S1734-p GKLNLSPSQYINEEN 0.887730980008826 0.0123496888209154 0.023 -0.497666666666667 1.00733258246774 26.6399679976551 0.023 -0.497666666666667 0.792988230809198 0.00216772007828308 0.275716718521001 -5.464075000564 Q8NG31 CASC5 Q8NG31.S1734.p_CASC5 Q8NG31_S1734s_1_1_1734_1734 Q8NG31 Q8NG31|Q8NG31-2|Q8NG31-4|Q8NG31-3|E9PPJ1 Kinetochore scaffold 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.32655.32655.5 13.83 13.83 1.205 10 1 1 0 1107.5536 5452.7738 S1734s N1750n TMT10 1719 (K) DSGIGSVAGKLNLSPsQYINEENLPVYPDEInSSDSINIETEEK (A) DS(0.0)GIGS(0.0)VAGKLN(0.0)LS(0.0)PS(0.99)QY(0.0)IN(0.0)EEN(0.0)LPVY(0.0)PDEIN(0.99)S(0.0)S(0.0)DS(0.0)IN(0.0)IET(0.0)EEK K:TMT10,s:Phosphorylated S,n:Deamidated KNL1 268353.4 6 12 650.1 254.2 HUMAN 1 1.0073 -26.64 GKLPTLVSLFDDEDE-p Q641Q2;S571-p GKLPTLVSLFDDEDE 0.826776350969775 0.0093168891102015 -0.0693333333333333 1.184 1.59303654663972 28.6714862913009 -0.0693333333333334 1.184 0.692941138597226 0.00135784866885537 -0.416664151686094 6.02888165970275 Q641Q2 FAM21A Q641Q2.S571.p_FAM21A Q641Q2_S571s _1_1_571_571 Q641Q2 Q641Q2|Q641Q2-2|E7ESD2|F8W7U3|A0A087WYF6 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36828.36828.4 23.75 23.75 4.762 4 1 1 0 1022.5396 4007.1468 S571s TMT10 558 (K) GASLLPGKLPTLVsLFDDEDEEDNLFGGTAAK (K) GAS(0.0)LLPGKLPT(0.0)LVS(0.99)LFDDEDEEDNLFGGT(0.0)AAK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 1 37 12.1 1178.3 HUMAN 1 -1.593 28.6715 GKLPTSVSLFDDEDE-p A0A0A0MR88;S571-p GKLPTSVSLFDDEDE 0.803071219855168 0.00610513292104681 -0.057 0.606333333333333 1.83381123012364 31.9312332304822 -0.057 0.606333333333334 0.655569706687695 0.000641027523400937 -0.471675493923104 7.02981739478619 A0A0A0MR88 NotFound A0A0A0MR88.S571.p_NotFound A0A0A0MR88_S571s_1_1_571_571 A0A0A0MR88 A0A0A0MR88|A0A096LPC5|Q9Y4E1-4|Q9Y4E1-2|Q9Y4E1-6 WASH complex subunit 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34312.34312.4 20.03 20.03 2.547 5 1 1 0 1016.269 3981.0948 S571s N581n TMT10 558 (K) GASLLPGKLPTSVsLFDDEDEEDnLFGGTAAK (K) GAS(0.0)LLPGKLPT(0.0)S(0.0)VS(0.99)LFDDEDEEDN(1.0)LFGGT(0.0)AAK K:TMT10,s:Phosphorylated S,n:Deamidated WASHC2C 147223 3 9 12.99 1178.3 HUMAN 1 -1.8338 31.9312 GKLQELASPPAGRPT-p Q8N3F8;S295-p GKLQELASPPAGRPT 0.681222809414458 0.7946514425832 -0.0663333333333333 -0.0363333333333333 3.12886921863556 1.39361989136907 -0.0663333333333333 -0.0363333333333333 0.486533869012733 0.725500992442059 -0.74646772296795 -0.369855618410586 Q8N3F8 MICALL1 Q8N3F8.S295.p_MICALL1 Q8N3F8_S295s _1_1_295_295 Q8N3F8 Q8N3F8 MICAL-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14009.14215.3 12.19 8.3 8.782 2 1 1 0 689.7031 1987.1286 S295s TMT10 290 (K) LQELAsPPAGRPTPAPR (K) LQELAS(0.99)PPAGRPT(0.0)PAPR s:Phosphorylated S MICALL1 94409.4 2 3 755.1 231.25 HUMAN 1 -3.1289 -1.3936 GKLQKTVSYPDVSLE-p P12757;S452-p GKLQKTVSYPDVSLE 0.142182032765393 0.76915098289621 -0.369333333333333 0.034 17.314733834428 1.57530817619563 -0.369333333333333 0.034 0.0185578054096227 0.695775580580452 -3.32488369926322 0.412508051335789 P12757 SKIL P12757.S452.p_SKIL P12757_S452s _1_1_452_452 P12757 P12757|P12757-5 Ski-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19489.19489.3 13.75 12.22 1.119 4 1 1 0 721.3619 2082.1007 S452s TMT10 450 (K) TVsYPDVSLEEQEK (M) T(0.0)VS(0.99)Y(0.0)PDVS(0.0)LEEQEK K:TMT10,s:Phosphorylated S SKIL 78229.8 1 3 2963.1 64.59 HUMAN 1 -17.3147 1.5753 GKLRASESPSSLIFY-p Q6ZNL6;S718-p GKLRASESPSSLIFY 0.56847874193114 0.0833753761379893 -0.176333333333333 -0.343666666666667 4.51279392819016 14.2837023345817 -0.176333333333333 -0.343666666666667 0.35376967872035 0.0372932099850643 -1.01396660349675 -2.74347074916053 Q6ZNL6 FGD5 Q6ZNL6.S718.p_FGD5 Q6ZNL6_S718s _1_1_718_718 Q6ZNL6 Q6ZNL6|B7ZM68 FYVE, RhoGEF and PH domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17789.17789.3 10.47 10.47 1.629 5 1 1 0 655.9895 1885.9857 S718s Hydrogen 715 (R) ASEsPSSLIFYRDGK (R) AS(0.0)ES(0.99)PS(0.0)S(0.0)LIFY(0.0)RDGK K:TMT10-Lys-Only,s:Phosphorylated S FGD5 161828 1 8 1305.1 156.12 HUMAN 1 -4.5128 -14.2837 GKMAAADSVQQRRQY-p A9Z1X7;S473-p GKMAAADSVQQRRQY 0.805205983516672 0.0946591576222299 -0.0453333333333333 0.308666666666667 1.81321499160646 13.5388403432142 -0.0453333333333333 0.308666666666667 0.658686103110613 0.0442706568462532 -0.467027987512931 2.60712963052524 A9Z1X7 NotFound A9Z1X7.S473.p_NotFound A9Z1X7_S473s _1_1_473_473 A9Z1X7 A9Z1X7|Q8IYB3 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6573.6573.2 14.08 14.08 99 1 1 1 0 693.3268 1305.6783 S473s TMT10 468 (K) MAAADsVQQR (R) MAAADS(1.0)VQQR s:Phosphorylated S SRRM1 103445.7 3 17 8.1 1346.57 HUMAN 1 -1.8132 13.5388 GKMASRRSEEKEAGE-p Q9NQ29;S363-p GKMASRRSEEKEAGE 0.0848925536936968 0.0323955414791055 0.977 -0.884 22.9175202436617 20.0986795381177 0.977 -0.884 0.00510796573905982 0.00977534392747313 4.53495622602413 -3.8964910405484 Q9NQ29 LUC7L Q9NQ29.S363.p_LUC7L Q9NQ29_S363s _1_1_363_363 Q9NQ29 Q9NQ29|Q9NQ29-3 Putative RNA-binding protein Luc7-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7700.7700.2 9.27 9.27 99 1 1 1 0 650.7972 1220.6208 S363s Hydrogen 363 (R) sEEKEAGEI (-) S(1.0)EEKEAGEI K:TMT10-Lys-Only,s:Phosphorylated S LUC7L 44126.6 4 2 2670.1 74.39 HUMAN 1 22.9175 -20.0987 GKMNEEISSDSESES-p O43818;S50-p GKMNEEISSDSESES 0.6162038915283 0.0205844296633268 -0.0943333333333334 0.345333333333333 3.90236312392321 23.075412406237 -0.0943333333333334 0.345333333333333 0.407158670518287 0.00492559567649811 -0.898419642533256 4.56714065612563 O43818 RRP9 O43818.S50.p_RRP9 O43818_S50sS51sS53s_3_3_50_53 O43818 O43818 U3 small nucleolar RNA-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22373.22373.5 13.68 13.68 2.868 6 3 3 0 1045.2782 4982.4606 S50s S51s S53s TMT10 45 (K) MNEEIssDsESESLAPRKPEEEEEEELEETAQEKK (L) MNEEIS(0.99)S(0.99)DS(0.99)ES(0.0)ES(0.0)LAPRKPEEEEEEELEET(0.0)AQEKK K:TMT10,s:Phosphorylated S RRP9 52467.3 6 3 3279.1 55.18 HUMAN 1 -3.9024 23.0754 GKNFDEESNASMSTA-p Q9P2D1;S2272-p GKNFDEESNASMSTA 0.0795650721861747 0.00828279311297773 0.755333333333333 -0.739 23.4836164428497 29.601317637138 0.755333333333333 -0.739 0.00448371867675845 0.00109614557822919 4.66969367562205 -6.30192014522404 Q9P2D1 CHD7 Q9P2D1.S2272.p_CHD7 Q9P2D1_S2272s _1_1_2272_2272 Q9P2D1 Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8805.8805.3 14.59 11.18 2.194 4 1 1 0 761.3553 2202.0861 S2272s TMT10 2265 (R) GKNFDEEsNASMSTAR (D) GKNFDEES(0.99)NAS(0.0)MS(0.0)T(0.0)AR K:TMT10,s:Phosphorylated S CHD7 337747 1 8 256.1 399.25 HUMAN 1 23.4836 -29.6013 GKNSQEDSEDSEDKD-p Q9H1E3;S58-p GKNSQEDSEDSEDKD 0.0932391121930034 0.00968533308933576 0.347333333333333 0.420333333333333 21.9082215328278 28.362726274737 0.347333333333333 0.420333333333333 0.00644433111487095 0.0014578987799795 4.3009734070659 5.94029222046116 Q9H1E3 NUCKS1 Q9H1E3.S58.p_NUCKS1 Q9H1E3_S58s_1_1_58_58 Q9H1E3 Q9H1E3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6464.6464.4 17.84 17.84 2.921 4 1 1 0 692.08 2684.3466 N53n S58s Hydrogen 50 (R) SGKnSQEDsEDSEDKDVK (T) S(0.0)GKN(1.0)S(0.0)QEDS(0.99)EDS(0.0)EDKDVK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S NUCKS1 27295.9 18 6 48.1 767.83 HUMAN 1 21.9082 28.3627 GKPEDEASGSFFKQI-p J3KNL6;S559-p GKPEDEASGSFFKQI 0.505331441375725 0.729285470312838 0.102 0.0456666666666667 5.47289838297347 1.8890836734661 0.102 0.0456666666666667 0.283602569743451 0.647279172057176 1.19005675465217 0.484041193819933 J3KNL6 SEC16A J3KNL6.S559.p_SEC16A J3KNL6_S559s _1_1_559_559 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29667.29667.4 16.61 12.25 1.168 5 1 1 0 1052.2981 4126.2064 S559s TMT10 533 (R) LSGSARPQELVGTFIQQEVGKPEDEAsGSFFK (Q) LS(0.0)GS(0.0)ARPQELVGT(0.0)FIQQEVGKPEDEAS(0.99)GS(0.0)FFK K:TMT10,s:Phosphorylated S SEC16A 253486.5 3 13 15.1 1143.82 HUMAN 1 5.4729 1.8891 GKPGRPLSPANVPAL-p Q8IY33;S712-p GKPGRPLSPANVPAL 0.928692176788334 0.517264442919789 -0.0136666666666667 0.0976666666666667 0.637678995257948 3.84491587841724 -0.0136666666666667 0.0976666666666667 0.863439873597064 0.412580228598804 -0.180349830641129 0.887220566108818 Q8IY33 MICALL2 Q8IY33.S712.p_MICALL2 Q8IY33_S712s _1_1_712_712 Q8IY33 Q8IY33|Q8IY33-5|Q8IY33-3 MICAL-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17754.17754.5 23.21 23.21 23.214 4 1 1 0 774.4459 3788.2266 S712s TMT10 700 (K) KPHLQGKPGRPLsPANVPALPGETVTSPVR (L) KPHLQGKPGRPLS(0.99)PANVPALPGET(0.0)VT(0.0)S(0.0)PVR K:TMT10,s:Phosphorylated S MICALL2 98299.3 2 25 387.1 332.82 HUMAN 1 -0.6377 3.8449 GKPKKPGTPENNKEY-p P16471;T539-p GKPKKPGTPENNKEY 0.0548133552132231 0.0220406792668852 0.504 0.323666666666667 27.4648098253831 22.6379739732579 0.504 0.323666666666667 0.00179274705382795 0.00544756727978822 5.69636497691555 4.46446392531811 P16471 PRLR P16471.T539.p_PRLR P16471_T539t _1_1_539_539 P16471 P16471|P16471-2 Prolactin receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5830.5830.3 9.05 5.82 99 1 1 1 0 584.66 1671.9997 T539t TMT10 536 (K) KPGtPENNK (E) KPGT(1.0)PENNK K:TMT10,t:Phosphorylated T PRLR 70474.2 2 9 827.1 217.44 HUMAN 1 27.4648 22.638 GKPLPGATPAKRFKL-p Q9NX07;T74-p GKPLPGATPAKRFKL 0.0499167591004882 0.00112568182952083 0.715333333333333 -1.07333333333333 28.7826189002202 49.0554414605406 0.715333333333334 -1.07333333333333 0.00132354316612643 1.24295628285953e-05 6.0701152341384 -15.0632434938511 Q9NX07 TRNAU1AP Q9NX07.T74.p_TRNAU1AP Q9NX07_T74t _1_1_74_74 Q9NX07 Q9NX07 tRNA selenocysteine 1-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12048.12048.4 9.31 9.31 99 1 1 1 0 547.5795 2107.3319 T74t TMT10 65 (K) INGKPLPGAtPAKR (F) INGKPLPGAT(1.0)PAKR K:TMT10,t:Phosphorylated T TRNAU1AP 32783.2 1 1 6818.1 9.31 HUMAN 1 28.7826 -49.0554 GKPSEQLTPTRAEKL-p Q14687;T433-p GKPSEQLTPTRAEKL 0.11927249976868 0.00815813217337322 -0.282666666666667 -0.542 19.2115266387947 29.7460878283526 -0.282666666666667 -0.542 0.0119907772736822 0.00106020834228537 -3.71174146730439 -6.34529489290135 Q14687 GSE1 Q14687.T433.p_GSE1 Q14687_T433t _1_1_433_433 Q14687 Q14687|Q14687-3|Q14687-2 Genetic suppressor element 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8270.8270.3 15 9.64 2.766 3 1 1 0 770.4321 2229.317 T433t TMT10 426 (R) GKPSEQLtPTRAEK (L) GKPS(0.0)EQLT(0.99)PT(0.0)RAEK K:TMT10,t:Phosphorylated T GSE1 136446.7 10 4 221.1 428.09 HUMAN 1 -19.2115 -29.7461 GKPVKTGSPTFVREL-p Q9UPP1;S120-p GKPVKTGSPTFVREL 0.202791717001177 0.017689487405434 1.01633333333333 -1.32733333333333 13.4420601921971 24.1392092004784 1.01633333333333 -1.32733333333333 0.0452682786756578 0.00385548555162811 2.59103729780618 -4.82326519999499 Q9UPP1 PHF8 Q9UPP1.S120.p_PHF8 Q9UPP1_S120s _1_1_120_120 Q9UPP1 Q9UPP1|Q9UPP1-2|Q9UPP1-3|Q9UPP1-4|Q9UPP1-5 Histone lysine demethylase PHF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10702.10702.3 9.74 9.74 2.08 3 1 1 0 714.4196 2061.2788 S120s TMT10 113 (K) GKPVKTGsPTFVR (E) GKPVKT(0.0)GS(0.99)PT(0.0)FVR K:TMT10,s:Phosphorylated S PHF8 118946 3 17 376.1 336.84 HUMAN 1 13.4421 -24.1392 GKPVRPDSAHKMLVR-p Q8WX93;S1179-p GKPVRPDSAHKMLVR 0.252941851692323 0.248431968422188 -0.166333333333333 0.131666666666667 11.384168928879 7.96768424005716 -0.166333333333333 0.131666666666667 0.0727081521092945 0.159673033430949 -2.22355463772366 1.6290400257256 Q8WX93 PALLD Q8WX93.S1179.p_PALLD Q8WX93_S1179s _1_1_1179_1179 Q8WX93 Q8WX93|Q8WX93-5|Q8WX93-9|Q8WX93-2|Q8WX93-3|Q8WX93-8|Q8WX93-4|Q8WX93-7 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22918.22918.4 15.92 15.92 3.843 4 1 1 0 867.7228 3387.8992 S1179s TMT10 1158 (K) VSGLPTPDLSWQLDGKPVRPDsAHK (M) VS(0.0)GLPT(0.0)PDLS(0.0)WQLDGKPVRPDS(0.99)AHK K:TMT10,s:Phosphorylated S PALLD 151930.4 1 14 338.1 354.43 HUMAN 1 -11.3842 7.9677 GKPYYYNSQTKESRW-p O75400;S202-p GKPYYYNSQTKESRW 0.925959463799184 0.0648250844466497 0.018 -0.239 0.660099437652599 15.8128166309482 0.018 -0.239 0.858993853442869 0.026225171497186 0.186301058409169 -3.03022088347961 O75400 PRPF40A O75400.S202.p_PRPF40A O75400_S202s _1_1_202_202 O75400 O75400|O75400-3|O75400-2 Pre-mRNA-processing factor 40 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10900.10900.3 17.17 17.17 2.153 7 1 1 0 802.4047 2325.233 S202s TMT10 192 (K) SDSGKPYYYNsQTK (E) S(0.0)DS(0.0)GKPY(0.0)Y(0.0)Y(0.0)NS(0.99)QT(0.0)K K:TMT10,s:Phosphorylated S PRPF40A 109088.4 1 4 718.2 237.38 HUMAN 1 0.6601 -15.8128 GKQAENDSSNDDKTK-p Q9BXP5;S319-p GKQAENDSSNDDKTK 0.667250851546625 0.164721327820138 0.142 0.143333333333333 3.28485603515061 10.2987585295417 0.142 0.143333333333333 0.469368993233842 0.0933521118200369 0.777699035073379 2.03281630160866 Q9BXP5 SRRT Q9BXP5.S319.p_SRRT Q9BXP5_S319s _1_1_319_319 Q9BXP5 Q9BXP5|Q9BXP5-3|Q9BXP5-2|Q9BXP5-4|Q9BXP5-5 Serrate RNA effector molecule homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5043.5043.4 14.53 14.53 1.13 2 1 1 0 694.8504 2696.4145 S319s TMT10 309 (K) KEDGKQAENDsSNDDK (T) KEDGKQAENDS(0.99)S(0.0)NDDK K:TMT10,s:Phosphorylated S SRRT 101121.1 3 7 321.1 364.45 HUMAN 1 3.2849 10.2988 GKQEAGDSPPPAPGT-p J3KR72;S710-p GKQEAGDSPPPAPGT 0.286533226429727 0.235250546481916 0.195333333333333 0.314666666666667 10.24355714026 8.27733063512259 0.195333333333333 0.314666666666667 0.0945462451951038 0.148684924442168 2.02405823774991 1.68268604215393 J3KR72 NotFound J3KR72.S710.p_NotFound J3KR72_S710s _1_1_710_710 J3KR72 J3KR72|P49848-3 Transcription initiation factor TFIID subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9564.9564.2 17.85 17.85 7.662 2 1 1 0 993.9982 1907.0275 S710s TMT10 705 (K) QEAGDsPPPAPGTPK (A) QEAGDS(0.99)PPPAPGT(0.0)PK K:TMT10,s:Phosphorylated S TAF6 79746 2 4 2409.1 84.76 HUMAN 1 10.2436 8.2773 GKQKFNDSEGDDTEE-p Q9NYF8;S397-p GKQKFNDSEGDDTEE 0.472226540382335 0.00995309608398391 -0.156333333333333 0.432 6.00993110744014 28.1393883730796 -0.156333333333333 0.432 0.250614900800445 0.00153483312166243 -1.28633254923853 5.87684154101593 Q9NYF8 BCLAF1 Q9NYF8.S397.p_BCLAF1 Q9NYF8_S397s _1_1_397_397 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|A0A1W2PQ43 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11782.11997.5 20.27 20.27 5.686 4 1 1 0 701.7377 3424.686 S397s TMT10 392 (K) QKFNDsEGDDTEETEDYRQFRK (S) QKFNDS(0.99)EGDDT(0.0)EET(0.0)EDY(0.0)RQFRK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 51 17 10.1 1293.04 HUMAN 1 -6.0099 28.1394 GKQNQTTSAVSTPAS-p P49792;S1640-p GKQNQTTSAVSTPAS 0.893982072527364 0.518846202459512 -0.0256666666666667 -0.119333333333333 0.950274611072734 3.82848452188684 -0.0256666666666667 -0.119333333333333 0.803475315600805 0.414144165931726 -0.261358402214068 -0.884053874237879 P49792 RANBP2 P49792.S1640.p_RANBP2 P49792_S1640s _1_1_1640_1640 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8458.8458.3 15.96 15.96 1.147 9 1 1 0 788.0578 2282.1876 S1640s TMT10 1635 (K) QNQTTsAVSTPASSETSK (A) QNQT(0.0)T(0.0)S(0.99)AVS(0.0)T(0.0)PAS(0.0)S(0.0)ET(0.0)S(0.0)K K:TMT10,s:Phosphorylated S RANBP2 362585.9 1 32 9.1 1298.62 HUMAN 1 -0.9503 -3.8285 GKQPLLLSEDEEDTK-p B5ME19;S39-p GKQPLLLSEDEEDTK 0.675164924930869 0.282077288010522 0.0633333333333333 -0.145666666666667 3.19604718905325 7.24594995800649 0.0633333333333333 -0.145666666666667 0.479065924597253 0.188540651826418 0.759958015639297 -1.50357034725609 B5ME19 EIF3CL B5ME19.S39.p_EIF3CL B5ME19_S39s_1_1_39_39 B5ME19 B5ME19|Q99613|Q99613-2 Eukaryotic translation initiation factor 3 subunit C-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19489.19489.2 20.29 20.29 13.35 2 1 1 0 982.9748 1902.0018 Q34q S39s Hydrogen 34 (K) qPLLLsEDEEDTKR (V) Q(1.0)PLLLS(0.99)EDEEDT(0.0)KR K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S EIF3CL 106155.7 23 4 451.1 308.49 HUMAN 1 3.196 -7.2459 GKQRSSHSLDYDKDR-p Q9UK61;S673-p GKQRSSHSLDYDKDR 0.218756095380882 0.0604366152213464 -0.431333333333333 0.421333333333333 12.717409062647 16.2340672382592 -0.431333333333333 0.421333333333333 0.0534883367822911 0.0238008943293354 -2.4602680550878 3.1110254062273 Q9UK61 FAM208A Q9UK61.S673.p_FAM208A Q9UK61_S673s _1_1_673_673 Q9UK61 Q9UK61|Q9UK61-4|Q9UK61-3|Q9UK61-2|A0A087X0F1 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7948.7948.3 15.22 15.22 3.585 4 1 1 0 530.5933 1509.7949 S673s TMT10 670 (R) SSHsLDYDK (D) S(0.0)S(0.0)HS(0.99)LDY(0.0)DK K:TMT10,s:Phosphorylated S FAM208A 190568.5 1 5 246.1 411.17 HUMAN 1 -12.7174 16.2341 GKRAHSKSLDYLNLD-p Q96GV9;S167-p GKRAHSKSLDYLNLD 0.108085133456159 0.0535143706010079 -0.581666666666667 0.235333333333333 20.3084873105264 16.9537682084412 -0.581666666666667 0.235333333333333 0.00931432245788494 0.0201661586329904 -3.94547006796516 3.25106573110822 Q96GV9 C5orf30 Q96GV9.S167.p_C5orf30 Q96GV9_S167s _1_1_167_167 Q96GV9 Q96GV9 UNC119-binding protein C5orf30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23862.23862.3 12.35 12.35 5.273 2 1 1 0 540.2885 1538.883 S167s TMT10 167 (K) sLDYLNLDK (M) S(0.99)LDY(0.0)LNLDK K:TMT10,s:Phosphorylated S C5orf30 23368.2 3 5 2347.1 87.13 HUMAN 1 -20.3085 16.9538 GKRDGINSLERKLKR-p Q9UGL1-2;S1441-p GKRDGINSLERKLKR 0.950174393059231 0.0857989275445938 -0.0123333333333333 -0.339 0.439200796551619 14.1154400022835 -0.0123333333333333 -0.339 0.903815781667838 0.0387664470577908 -0.12661649758887 -2.71249472085981 Q9UGL1 KDM5B Q9UGL1.2.S1441.p_KDM5B Q9UGL1-2_S1441s _1_1_1441_1441 Q9UGL1-2 Q9UGL1-2 Isoform 2 of Lysine-specific demethylase 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10360.10360.2 10.79 4.7 99 1 1 1 0 606.7953 1132.616 S1441s TMT10 1437 (R) DGINsLER (K) DGINS(1.0)LER s:Phosphorylated S KDM5B 182657.7 1 3 3314.1 54.16 HUMAN 1 -0.4392 -14.1154 GKRDPEDSDVFEEDT-p Q9NZ53;S596-p GKRDPEDSDVFEEDT 0.729035669255208 0.103521516153491 -0.0603333333333333 -0.355666666666667 2.60530567527156 13.0110534490958 -0.0603333333333333 -0.355666666666667 0.548869922404435 0.0499913258500114 -0.639038431244069 -2.5116794237077 Q9NZ53 PODXL2 Q9NZ53.S596.p_PODXL2 Q9NZ53_S596s _1_1_596_596 Q9NZ53 Q9NZ53|Q9NZ53-2 Podocalyxin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16569.16569.3 15.53 15.53 4.684 2 1 1 0 704.9701 2032.9297 S596s TMT10 591 (K) RDPEDsDVFEEDTHL (-) RDPEDS(0.99)DVFEEDT(0.0)HL s:Phosphorylated S PODXL2 65474 2 1 5899.1 15.53 HUMAN 1 -2.6053 -13.0111 GKRDPRNSPVPPTKK-p Q8NC06-2;S209-p GKRDPRNSPVPPTKK 0.62353043003294 0.154868716196147 0.0756666666666667 -0.143666666666667 3.81188429515332 10.6519315018647 0.0756666666666667 -0.143666666666667 0.415730196422178 0.0860610914880831 0.880995909177497 -2.09432666218181 Q8NC06 ACBD4 Q8NC06.2.S209.p_ACBD4 Q8NC06-2_S209s _1_1_209_209 Q8NC06-2 Q8NC06-2|K7EM05 Isoform 2 of Acyl-CoA-binding domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7150.7427.4 12.16 8.18 5.337 2 1 1 0 526.5535 2023.2267 S209s TMT10 205 (R) DPRNsPVPPTKK (E) DPRNS(0.99)PVPPT(0.0)KK K:TMT10,s:Phosphorylated S ACBD4 34983.4 9 2 1641.1 124.62 HUMAN 1 3.8119 -10.6519 GKRERSISADSFDQR-p O00512;S104-p GKRERSISADSFDQR 0.103158959778694 0.0273588124414629 -0.425 0.334 20.8200047127319 21.1996132723704 -0.425 0.334 0.00827941265274184 0.00758645127342575 -4.05718421328583 4.13709062416621 O00512 BCL9 O00512.S104.p_BCL9 O00512_S104sT115t_2_2_104_115 O00512 O00512 B-cell CLL/lymphoma 9 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17540.17540.3 10.46 10.46 1.118 5 2 2 0 1000.1081 2838.3794 S104s T115t TMT10 102 (R) SIsADSFDQRDPGtPNDDSDIK (E) S(0.0)IS(0.99)ADS(0.0)FDQRDPGT(0.99)PNDDS(0.0)DIK K:TMT10,s:Phosphorylated S,t:Phosphorylated T BCL9 149515.8 2 16 313.1 369.9 HUMAN 1 -20.82 21.1996 GKRKKQDSSDEDDDD-p O14647;S207-p GKRKKQDSSDEDDDD 0.600746876542819 0.0113523621250542 0.0933333333333333 0.454 4.08775581764498 27.2287670364144 0.0933333333333333 0.454 0.390143538181834 0.00189288093194242 0.933867461099929 5.62347048913611 O14647 CHD2 O14647.S207.p_CHD2 O14647_S207sS208s_2_2_207_208 O14647 O14647|O14647-2|B7Z3I4|O14647-3|A0A0D9SGK0 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4577.4577.5 12.82 12.82 12.825 3 2 2 0 711.7426 3394.7492 S207s S208s TMT10 203 (R) KKQDssDEDDDDDEAPKRQTR (R) KKQDS(0.99)S(0.99)DEDDDDDEAPKRQT(0.0)R K:TMT10,s:Phosphorylated S CHD2 212309.6 14 13 482.1 298.11 HUMAN 1 4.0878 27.2288 GKRKLITSEEERSPA-p Q12888-2;S1678-p GKRKLITSEEERSPA 0.659333162523436 0.934580858795175 -0.0793333333333333 0.0203333333333333 3.39410845496335 0.414972714813134 -0.0793333333333334 0.0203333333333333 0.457708686350636 0.908872009169156 -0.799383908324705 0.119910464417524 Q12888 TP53BP1 Q12888.2.S1678.p_TP53BP1 Q12888-2_S1678s _1_1_1678_1678 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12350.12350.2 9.47 9.47 1.108 3 1 1 0 949.507 1818.0373 S1678s TMT10 1675 (K) LITsEEERSPAK (R) LIT(0.0)S(0.99)EEERS(0.0)PAK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 13 73 3.1 2297.07 HUMAN 1 -3.3941 0.415 GKRKRRHSEVETDSK-p Q9NX58;S276-p GKRKRRHSEVETDSK 0.014801012310324 0.0033898894582079 -1.042 -1.03433333333333 43.1287140419592 36.9259097129082 -1.042 -1.03433333333333 4.86551253543442e-05 0.000202959333816269 -11.6619957621027 -8.83099791512283 Q9NX58 LYAR Q9NX58.S276.p_LYAR Q9NX58_S276s _1_1_276_276 Q9NX58 Q9NX58 Cell growth-regulating nucleolar protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3604.3604.4 11.22 11.22 3.98 3 1 1 0 521.5345 2003.1489 S276s TMT10 274 (R) RHsEVETDSKK (K) RHS(0.99)EVET(0.0)DS(0.0)KK K:TMT10,s:Phosphorylated S LYAR 44070.4 4 2 3609.1 47.07 HUMAN 1 -43.1287 -36.9259 GKRLRAVSPFLKEAD-p Q03989;S463-p GKRLRAVSPFLKEAD 0.883845724742002 0.0517810708124788 0.0233333333333333 0.259333333333333 1.06028615768604 17.1595644539815 0.0233333333333333 0.259333333333333 0.783378024097895 0.0192328460194504 0.288932954409417 3.29159110031835 Q03989 ARID5A Q03989.S463.p_ARID5A Q03989_S463s _1_1_463_463 Q03989 Q03989|Q03989-5 AT-rich interactive domain-containing protein 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21109.21109.2 11.35 11.35 99 1 1 1 0 650.3777 1219.7815 S463s TMT10 461 (R) AVsPFLK (E) AVS(1.0)PFLK K:TMT10,s:Phosphorylated S ARID5A 64757.7 1 1 6491.1 11.35 HUMAN 1 1.0603 17.1596 GKRLSGSSEDEEDSG-p Q9BW71;S333-p GKRLSGSSEDEEDSG 0.656250820343572 0.120913331010992 0.061 0.167333333333333 3.43297107182345 12.0970020002142 0.061 0.167333333333333 0.453631174777748 0.0617020793564771 0.807061468754822 2.34836901674324 Q9BW71 HIRIP3 Q9BW71.S333.p_HIRIP3 Q9BW71_S330sS332sS333s_3_3_330_333 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10288.10288.4 11.23 11.23 11.232 5 3 3 0 752.3381 2766.4361 S330s S332s S333s TMT10 328 (K) RLsGssEDEEDSGKGEPTAK (G) RLS(0.99)GS(0.99)S(0.99)EDEEDS(0.0)GKGEPT(0.0)AK K:TMT10,s:Phosphorylated S HIRIP3 62298.3 21 29 178.1 481.23 HUMAN 1 3.433 12.097 GKRMQSLSLNK____-p Q13442;S178-p GKRMQSLSLNK____ 0.380643803112374 0.927601724721068 -0.130333333333333 -0.012 7.75299437901438 0.460315485992929 -0.130333333333333 -0.012 0.16776469131797 0.899432241399686 -1.59228028625098 -0.132413840556417 Q13442 PDAP1 Q13442.S178.p_PDAP1 Q13442_S178s _1_1_178_178 Q13442 Q13442 28 kDa heat- and acid-stable phosphoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12726.12726.3 11.12 11.12 4.118 2 1 1 0 538.9656 1534.914 S178s TMT10 173 (K) RMQSLsLNK (-) RMQS(0.0)LS(0.99)LNK K:TMT10,s:Phosphorylated S PDAP1 20629.7 3 5 1837.1 111.85 HUMAN 1 -7.753 -0.4603 GKRQRFHSPHQEPTV-p Q6PIY7;S95-p GKRQRFHSPHQEPTV 0.942896336607154 0.159605376371289 -0.0106666666666667 -0.151 0.502673992613308 10.4809495240237 -0.0106666666666667 -0.151 0.890702355318171 0.0895169027989453 -0.144012113177532 -2.06452541951664 Q6PIY7 PAPD4 Q6PIY7.S95.p_PAPD4 Q6PIY7_S95s _1_1_95_95 Q6PIY7 Q6PIY7|Q6PIY7-2|D6RAF2 Poly(A) RNA polymerase GLD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18181.18181.4 20.63 20.63 4.723 3 1 1 0 670.842 2600.3783 S95s TMT10 93 (R) FHsPHQEPTVVNQIVPLSGER (R) FHS(0.99)PHQEPT(0.0)VVNQIVPLS(0.0)GER s:Phosphorylated S PAPD4 56540.1 4 2 3027.1 62.87 HUMAN 1 -0.5027 -10.4809 GKRSCQKSPAQQEPP-p P51825-2;S595-p GKRSCQKSPAQQEPP 0.434351622206735 0.127441913878681 0.147 -0.184 6.67109641504024 11.7931775326803 0.147 -0.184 0.215223831442984 0.0661732167593696 1.4033084220071 -2.29458114860031 P51825 AFF1 P51825.2.S595.p_AFF1 P51825-2_S595s _1_1_595_595 P51825-2 P51825-2 Isoform 2 of AF4/FMR2 family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4096.4096.3 7.52 7.52 1.406 2 1 1 0 727.0298 2099.1068 S595s TMT10 591 (R) SCQKsPAQQEPPQR (Q) S(0.0)CQKS(0.99)PAQQEPPQR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AFF1 133180 2 4 1199.1 167.15 HUMAN 1 6.6711 -11.7932 GKRSLTRSPPAIRRR-p Q9UQ35;S2071-p GKRSLTRSPPAIRRR 0.0719549135296335 0.401649080355732 0.405 0.136333333333333 24.6370214353086 5.26908314597099 0.405 0.136333333333333 0.00343793654455956 0.297229345660894 4.95242901188278 1.1529044836126 Q9UQ35 SRRM2 Q9UQ35.S2071.p_SRRM2 Q9UQ35_S2071s _1_1_2071_2071 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9765.9765.3 8.88 8.88 2.743 3 1 1 0 469.5954 1326.8055 S2071s TMT10 2067 (R) SLTRsPPAIR (R) S(0.0)LT(0.0)RS(0.99)PPAIR s:Phosphorylated S SRRM2 300351.7 2 131 2.1 3310.34 HUMAN 1 24.637 5.2691 GKRSSDGSLSHEEDL-p Q13136;S242-p GKRSSDGSLSHEEDL 0.282535045693496 0.717479737699147 -0.152 0.0423333333333334 10.3754123566674 1.98405864616515 -0.152 0.0423333333333334 0.0917188845429567 0.633277612753806 -2.04701462398766 0.505210326622068 Q13136 PPFIA1 Q13136.S242.p_PPFIA1 Q13136_S239sS242s_2_2_239_242 Q13136 Q13136|Q13136-2|E9PJZ7 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13401.13401.2 10.76 10.76 1.278 4 2 2 0 1046.965 1932.9915 S239s S242s TMT10 238 (R) SsDGsLSHEEDLAK (V) S(0.0)S(0.99)DGS(0.99)LS(0.0)HEEDLAK K:TMT10,s:Phosphorylated S PPFIA1 136347 7 37 248.1 410.18 HUMAN 1 -10.3754 1.9841 GKRVGKPSPKAASSP-p Q7Z5J4;S1102-p GKRVGKPSPKAASSP 0.524311608225587 0.0304051364354089 -0.0893333333333333 -0.310666666666667 5.18779688032202 20.5108059541927 -0.0893333333333333 -0.310666666666667 0.302844933163256 0.00889036117171679 -1.13836414387551 -3.98559086530687 Q7Z5J4 RAI1 Q7Z5J4.S1102.p_RAI1 Q7Z5J4_S1102s _1_1_1102_1102 Q7Z5J4 Q7Z5J4|Q7Z5J4-2|A0A1W2PQJ7|Q7Z5J4-3 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8182.8182.3 8.39 8.39 99 1 1 1 0 493.9684 1399.924 S1102s TMT10 1098 (R) VGKPsPK (A) VGKPS(1.0)PK K:TMT10,s:Phosphorylated S RAI1 206315.3 8 10 142.1 522.21 HUMAN 1 -5.1878 -20.5108 GKSEAPETPMEEEAE-p Q5JTH9;T77-p GKSEAPETPMEEEAE 0.647212345313252 0.0252044233995612 0.0626666666666667 0.358333333333333 3.54079127001126 21.7525587613322 0.0626666666666667 0.358333333333333 0.442507741587968 0.00667950260969685 0.82826644325921 4.26113321576605 Q5JTH9 RRP12 Q5JTH9.T77.p_RRP12 Q5JTH9_T77t _1_1_77_77 Q5JTH9 Q5JTH9|Q5JTH9-3|Q5JTH9-2 RRP12-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29755.29755.3 14.17 14.17 4.166 3 1 1 0 890.7676 2590.321 T77t TMT10 72 (K) SEAPEtPMEEEAELVLTEK (S) S(0.0)EAPET(0.99)PMEEEAELVLT(0.0)EK K:TMT10,t:Phosphorylated T RRP12 145125.9 2 2 1122.1 175.08 HUMAN 1 3.5408 21.7526 GKSETILSPPPEKRG-p Q9P0M6;S129-p GKSETILSPPPEKRG 0.842179784254459 0.00298089814036961 0.0316666666666667 -0.658 1.44242849385543 37.9791932929779 0.0316666666666667 -0.658 0.717393026273018 0.000159250450913347 0.381449321386264 -9.25854807342285 Q9P0M6 H2AFY2 Q9P0M6.S129.p_H2AFY2 Q9P0M6_S129s _1_1_129_129 Q9P0M6 Q9P0M6 Core histone macro-H2A.2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15149.15350.3 15.61 10.06 7.076 3 1 1 0 717.407 2070.2414 S129s TMT10 122 (K) GKSETILsPPPEK (R) GKS(0.0)ET(0.0)ILS(0.99)PPPEK K:TMT10,s:Phosphorylated S H2AFY2 40285.7 3 1 2255.1 91.14 HUMAN 1 1.4424 -37.9792 GKSGAALSKKSKGQV-p P09874;S504-p GKSGAALSKKSKGQV 0.0949352610946194 0.275866962263849 0.356333333333333 0.136333333333333 21.6871603828881 7.36975907189885 0.356333333333333 0.136333333333333 0.00678084725684401 0.183241607419922 4.25075515491472 1.52515094927265 P09874 PARP1 P09874.S504.p_PARP1 P09874_S504s _1_1_504_504 P09874 P09874 Poly [ADP-ribose] polymerase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8224.8224.2 10.26 3.11 4.857 2 1 1 0 586.3292 1091.6825 S504s TMT10 499 (K) SGAALsK (K) S(0.0)GAALS(0.99)K K:TMT10,s:Phosphorylated S PARP1 113880.5 1 7 1179.1 169.18 HUMAN 1 21.6872 7.3698 GKSKSGRSLNEELGD-p O14924;S879-p GKSKSGRSLNEELGD 0.331509205095072 0.751303792035684 -0.192 -0.067 8.95657619469014 1.71553461057676 -0.192 -0.067 0.12715761703422 0.673668962636849 -1.80084585698315 -0.444792043424136 O14924 RGS12 O14924.S879.p_RGS12 O14924_S879s _1_1_879_879 O14924 O14924|O14924-4|O14924-5 Regulator of G-protein signaling 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.11062.11062.2 12.37 12.37 12.367 2 1 1 0 887.3843 1693.7966 S879s Hydrogen 879 (R) sLNEELGDEDSEK (K) S(0.99)LNEELGDEDS(0.0)EK K:TMT10-Lys-Only,s:Phosphorylated S RGS12 157895 1 5 2684.1 74.03 HUMAN 1 -8.9566 -1.7155 GKSKSNDSEEGLEDA-p E9PJ55;S21-p GKSKSNDSEEGLEDA 0.191067686855971 0.0297318374183064 0.237333333333333 0.279 14.0534855740933 20.6627965261143 0.237333333333333 0.279 0.0393234345534966 0.00858460560190643 2.70274382421154 4.01873905101782 E9PJ55 NotFound E9PJ55.S21.p_NotFound E9PJ55_S21s _1_1_21_21 E9PJ55 E9PJ55|Q9NUJ3|E9PMB0 T-complex protein 11-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23635.23635.4 18.62 16.97 1.131 3 1 1 0 797.8903 3108.5788 S21s TMT10 16 (K) SKSNDsEEGLEDAVEGADEALQK (A) S(0.0)KS(0.0)NDS(0.99)EEGLEDAVEGADEALQK K:TMT10,s:Phosphorylated S TCP11L1 67865.3 2 1 2770.1 71.23 HUMAN 1 14.0535 20.6628 GKSPPHHSGFQQYQQ-p Q92540-4;S740-p GKSPPHHSGFQQYQQ 0.240454252921953 0.00281525226083368 -0.216666666666667 -0.654 11.8332750589023 38.5823363687586 -0.216666666666667 -0.654 0.065565064699972 0.000138600999815483 -2.30279670738023 -9.51164358756429 Q92540 SMG7 Q92540.4.S740.p_SMG7 Q92540-4_S740s _1_1_740_740 Q92540-4 Q92540-4|E9PD50|Q92540-5|Q92540-2 Isoform 4 of Protein SMG7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12976.12976.5 15.18 15.18 1.134 4 1 1 0 684.1603 3336.8056 S740s TMT10 728 (K) AVPALGKSPPHHsGFQQYQQADASK (Q) AVPALGKS(0.0)PPHHS(0.99)GFQQY(0.0)QQADAS(0.0)K K:TMT10,s:Phosphorylated S SMG7 132446.2 3 4 2418.1 84.3 HUMAN 1 -11.8333 -38.5823 GKSRPKLSFSLKTQD-p Q9NWB6;S266-p GKSRPKLSFSLKTQD 0.0973600331101722 0.0275368394115547 -0.343 -0.424333333333333 21.4366442201188 21.1582277306969 -0.343 -0.424333333333333 0.00718349143014164 0.00765909095397656 -4.19427938537233 -4.12789466372596 Q9NWB6 ARGLU1 Q9NWB6.S266.p_ARGLU1 Q9NWB6_S266s _1_1_266_266 Q9NWB6 Q9NWB6|X6R9F1 Arginine and glutamate-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16988.16988.4 7.71 7.71 1.523 3 1 1 0 483.294 1850.1831 S266s TMT10 261 (K) SRPKLsFSLK (T) S(0.0)RPKLS(0.99)FS(0.0)LK K:TMT10,s:Phosphorylated S ARGLU1 33215.8 1 3 3933.1 40.51 HUMAN 1 -21.4366 -21.1582 GKSRVPPTVTNAVSW-p Q9Y6Q5-2;T152-p GKSRVPPTVTNAVSW 0.543303086473255 0.212446508904024 0.131333333333333 0.242666666666667 4.89247567140075 8.85106485763298 0.131333333333333 0.242666666666667 0.324154782051922 0.130284729086092 1.08431637618083 1.78195237631563 Q9Y6Q5 AP1M2 Q9Y6Q5.2.T152.p_AP1M2 Q9Y6Q5-2_T152t _1_1_152_152 Q9Y6Q5-2 Q9Y6Q5-2 Isoform 2 of AP-1 complex subunit mu-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16351.16351.2 9.98 9.98 9.985 3 1 1 0 703.845 1326.7165 T152t Hydrogen 149 (R) VPPtVTNAVSWR (S) VPPT(0.99)VT(0.0)NAVS(0.0)WR t:Phosphorylated T AP1M2 48322.8 5 2 4110.1 37.43 HUMAN 1 4.8925 8.8511 GKSTLTDSLVCKAGI-p P13639;S38-p GKSTLTDSLVCKAGI 0.385914038502364 0.222362362926659 0.159666666666667 -0.160333333333333 7.65498764711539 8.59934703056102 0.159666666666667 -0.160333333333333 0.171593659084996 0.138059182342288 1.57524654662665 -1.73841252939803 P13639 EEF2 P13639.S38.p_EEF2 P13639_S38s _1_1_38_38 P13639 P13639 Elongation factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17527.17527.3 8.81 8.81 2.315 4 1 1 0 554.6243 1581.8922 S38s TMT10 33 (K) STLTDsLVCK (A) S(0.0)T(0.0)LT(0.0)DS(0.99)LVCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EEF2 96306.4 1 1 693.1 242.75 HUMAN 1 7.655 -8.5993 GKTEKHESQKDYVKG-p Q14247;S224-p GKTEKHESQKDYVKG 0.780774653521955 0.909064421190673 0.0466666666666667 0.013 2.06630296873612 0.579654038914478 0.0466666666666667 0.013 0.621397788243158 0.875053479634619 0.523435750600349 0.164823730063745 Q14247 CTTN Q14247.S224.p_CTTN Q14247_S224s _1_1_224_224 Q14247 Q14247-2|Q14247-3 Src substrate cortactin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6870.6870.5 12.38 12.38 6.707 3 1 1 0 498.4783 2408.3955 S224s TMT10 219 (K) TEKHEsQKDYVK (G) T(0.0)EKHES(0.99)QKDY(0.0)VK K:TMT10,s:Phosphorylated S CTTN 61756.2 2 4 493.1 293.68 HUMAN 1 2.0663 0.5797 GKTFVNITPAEVGVL-p P07737;T44-p GKTFVNITPAEVGVL 0.916056654296661 0.675009770198156 0.0186666666666667 0.046 0.745212110588378 2.33320546452125 0.0186666666666667 0.046 0.842323251140525 0.584358618322112 0.208686964171974 0.581318802272935 P07737 PFN1 P07737.T44.p_PFN1 P07737_T44t _1_1_44_44 P07737 P07737 Profilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.34165.34165.3 16.63 16.63 2.448 2 1 1 0 728.0814 2102.2625 T44t TMT10 39 (K) TFVNItPAEVGVLVGK (D) T(0.0)FVNIT(0.99)PAEVGVLVGK K:TMT10,t:Phosphorylated T PFN1 15225.1 1 2 1550.1 132.52 HUMAN 1 0.7452 2.3332 GKTGERPSQENGIQK-p Q9H1P3;S52-p GKTGERPSQENGIQK 0.831274858822432 0.673829807673418 0.0323333333333333 -0.0703333333333333 1.54513021958892 2.34372770655158 0.0323333333333333 -0.0703333333333333 0.700627174827245 0.582944527109535 0.405533156481744 -0.583573475935289 Q9H1P3 OSBPL2 Q9H1P3.S52.p_OSBPL2 Q9H1P3_S52s _1_1_52_52 Q9H1P3 Q9H1P3|Q9H1P3-2 Oxysterol-binding protein-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6457.6457.3 10.79 10.79 2.181 2 1 1 0 661.3419 1902.0445 S52s TMT10 47 (K) TGERPsQENGIQK (H) T(0.0)GERPS(0.99)QENGIQK K:TMT10,s:Phosphorylated S OSBPL2 55713.8 1 3 3541.1 48.7 HUMAN 1 1.5451 -2.3437 GKTILENSVKHSKAL-p Q8WWQ0;S1548-p GKTILENSVKHSKAL 0.1560557092084 0.0660071503440806 -0.348666666666667 -0.28 16.1966901945136 15.7029497963149 -0.348666666666667 -0.28 0.0240066179249371 0.0268970729193271 -3.10604851697869 -3.00928147953676 Q8WWQ0 PHIP Q8WWQ0.S1548.p_PHIP Q8WWQ0_S1548s _1_1_1548_1548 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15565.15565.2 10.91 10.91 4.406 2 1 1 0 721.4063 1361.8404 S1548s TMT10 1543 (K) TILENsVK (H) T(0.0)ILENS(0.99)VK K:TMT10,s:Phosphorylated S PHIP 208454.1 2 21 108.1 577.05 HUMAN 1 -16.1967 -15.7029 GKTNSVESLPELLTS-p Q9P2D0;S1021-p GKTNSVESLPELLTS 0.278859043149947 0.201557351341553 0.204333333333333 0.167666666666667 10.4852411774517 9.15178762537615 0.204333333333333 0.167666666666667 0.0894284868088462 0.121568550209877 2.06615418433909 1.83396939232888 Q9P2D0 IBTK Q9P2D0.S1021.p_IBTK Q9P2D0_S1021s _1_1_1021_1021 Q9P2D0 Q9P2D0 Inhibitor of Bruton tyrosine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28126.28126.3 16.54 16.54 1.219 9 1 1 0 987.7999 2881.4264 S1021s TMT10 1016 (K) TNSVEsLPELLTSDSEGSYAGVGSPR (D) T(0.0)NS(0.0)VES(0.99)LPELLT(0.0)S(0.0)DS(0.0)EGS(0.0)Y(0.0)AGVGS(0.0)PR s:Phosphorylated S IBTK 152465 1 5 907.1 202.21 HUMAN 1 10.4852 9.1518 GKTRDGGSVVGASVF-p O60271;S705-p GKTRDGGSVVGASVF 0.765963295929894 0.379847983820444 -0.051 0.101666666666667 2.22298739724298 5.58733540467421 -0.051 0.101666666666667 0.599378637656216 0.276227211672497 -0.557636871505402 1.21041525259018 O60271 SPAG9 O60271.S705.p_SPAG9 O60271_S705s _1_1_705_705 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-9|O60271-3|O60271-5 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22881.22881.3 13.69 13.69 7.48 3 1 1 0 608.6507 1743.9682 S705s TMT10 702 (R) DGGsVVGASVFYK (D) DGGS(0.99)VVGAS(0.0)VFY(0.0)K K:TMT10,s:Phosphorylated S SPAG9 147001.6 3 33 84.1 629.25 HUMAN 1 -2.223 5.5873 GKTSPPCSPANLSRH-p P49585;S347-p GKTSPPCSPANLSRH 0.601190727564913 0.697837861768123 0.093 -0.0766666666666666 4.08170165692082 2.14865289685482 0.093 -0.0766666666666666 0.390687786125021 0.60972599391659 0.932715070570541 -0.54141168458554 P49585 PCYT1A P49585.S347.p_PCYT1A P49585_S347s _1_1_347_347 P49585 C9JEJ2|P49585 Choline-phosphate cytidylyltransferase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8513.8513.3 9.73 5.66 5.962 4 1 1 0 532.5863 1515.7787 S347s TMT10 342 (K) TSPPCsPANLSR (H) T(0.0)S(0.0)PPCS(0.99)PANLS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PCYT1A 42072.6 2 10 694.1 242.25 HUMAN 1 4.0817 -2.1487 GKTSRRPSDSGPPAE-p Q9BST9;S106-p GKTSRRPSDSGPPAE 0.177944376974679 0.817311345097192 -0.320666666666667 -0.0473333333333333 14.8478656040787 1.22621657240016 -0.320666666666667 -0.0473333333333334 0.0327501610199568 0.754012147742917 -2.8499666424046 -0.329664418950135 Q9BST9 RTKN Q9BST9.S106.p_RTKN Q9BST9_S106s _1_1_106_106 Q9BST9 Q9BST9|Q9BST9-2|Q9BST9-3 Rhotekin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3061.3061.3 12.97 9.45 3.198 3 1 1 0 583.5904 1668.7871 S106s Hydrogen 104 (R) RPsDSGPPAERSPCR (G) RPS(0.99)DS(0.0)GPPAERS(0.0)PCR C:Carbamidomethylation,s:Phosphorylated S RTKN 63465.1 5 2 1486.1 137.99 HUMAN 1 -14.8479 -1.2262 GKTTLSASGTGFGDK-p P49790-3;S742-p GKTTLSASGTGFGDK 0.0848925536936968 0.431728091369457 -0.477333333333333 0.0956666666666667 22.9193384885622 4.86050969951472 -0.477333333333333 0.0956666666666667 0.00510582765323872 0.326549505207869 -4.53538488061678 1.07821990414969 P49790 NUP153 P49790.3.S742.p_NUP153 P49790-3_S742s _1_1_742_742 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17054.17054.2 13.92 11.15 1.237 5 1 1 0 890.4503 1699.9267 S742s TMT10 737 (K) TTLSAsGTGFGDK (F) T(0.0)T(0.0)LS(0.0)AS(0.99)GT(0.0)GFGDK K:TMT10,s:Phosphorylated S NUP153 158989.2 2 33 64.1 696.53 HUMAN 1 -22.9193 4.8605 GKVKRDRSVSVDSGE-p Q86UU0;S116-p GKVKRDRSVSVDSGE 0.682689616412835 0.0763317316243298 -0.0643333333333333 0.230666666666667 3.10684819334043 14.8267082732092 -0.0643333333333333 0.230666666666667 0.489007117881597 0.0329100977830146 -0.742032059820601 2.84418320880198 Q86UU0 BCL9L Q86UU0.S116.p_BCL9L Q86UU0_S116s _1_1_116_116 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10219.10219.3 15.97 15.97 2.263 6 1 1 0 1020.1616 2978.5067 S116s TMT10 114 (R) DRsVSVDSGEQREAGTPSLDSEAK (E) DRS(0.99)VS(0.0)VDS(0.0)GEQREAGT(0.0)PS(0.0)LDS(0.0)EAK K:TMT10,s:Phosphorylated S BCL9L 157526.3 3 4 139.1 524.37 HUMAN 1 -3.1068 14.8267 GKVKRKPSVPDSASP-p P16333;S85-p GKVKRKPSVPDSASP 0.0635370415880919 0.00455061128120994 -0.423 0.693 25.8785315715729 34.3258358633082 -0.423 0.693 0.00258313344727256 0.000369331554252959 -5.26977865777651 7.84929880282617 P16333 NCK1 P16333.S85.p_NCK1 P16333_S85s _1_1_85_85 P16333 P16333|P16333-2 Cytoplasmic protein NCK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13553.13553.4 20.22 18.27 1.594 4 1 1 0 717.6056 2787.4314 S85s TMT10 82 (K) RKPsVPDSASPADDSFVDPGER (L) RKPS(0.99)VPDS(0.0)AS(0.0)PADDS(0.0)FVDPGER K:TMT10,s:Phosphorylated S NCK1 43091.9 5 1 2057.1 100.15 HUMAN 1 -25.8785 34.3258 GKVMPTKSPPPPGGG-p Q02078-2;S253-p GKVMPTKSPPPPGGG 0.889554663153291 0.202986687577423 0.0246666666666667 0.131333333333333 0.991825206132566 9.10904713337801 0.0246666666666667 0.131333333333333 0.79582481943108 0.122770856780414 0.271826607585906 1.82657544664386 Q02078 MEF2A Q02078.2.S253.p_MEF2A Q02078-2_S253s _1_1_253_253 Q02078-2 Q02078|Q02078-2|Q02078-5|Q02078-3|Q02078-6|Q02078-4|Q02078-7|Q02078-8 Isoform MEFA of Myocyte-specific enhancer factor 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15180.15180.3 15.34 8.59 1.441 3 1 1 0 844.7692 2452.3205 S253s TMT10 248 (K) VMPTKsPPPPGGGNLGMNSR (K) VMPT(0.0)KS(0.99)PPPPGGGNLGMNS(0.0)R K:TMT10,s:Phosphorylated S MEF2A 54612.1 4 6 2279.1 89.95 HUMAN 1 0.9918 9.109 GKVQAELSQPLTAGG-p Q15291;S525-p GKVQAELSQPLTAGG 0.495020307487053 0.301862374972473 -0.176 0.202 5.62413230970697 6.86665846002427 -0.176 0.202 0.273896680619813 0.205747304394655 -1.21730410233896 1.43726217193273 Q15291 RBBP5 Q15291.S525.p_RBBP5 Q15291_S525s _1_1_525_525 Q15291 Q15291 Retinoblastoma-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.33197.33197.3 13.24 8.75 1.209 3 1 1 0 874.1504 2540.47 S525s TMT10 518 (K) GKVQAELsQPLTAGGAISELL (-) GKVQAELS(0.99)QPLT(0.0)AGGAIS(0.0)ELL K:TMT10,s:Phosphorylated S RBBP5 59836.2 1 8 1667.1 122.41 HUMAN 1 -5.6241 6.8667 GKVTRSPSPVPQEEH-p Q8TF01;S313-p GKVTRSPSPVPQEEH 0.0591011739260369 0.697876726532471 -0.7245 0.0936666666666667 26.8646834997686 2.14779050735407 -0.7245 0.0936666666666666 0.00205840889547657 0.609847080766109 -5.53208152333768 0.541223549078826 Q8TF01 PNISR Q8TF01.S313.p_PNISR Q8TF01_S311sS313s_2_2_311_313 Q8TF01 Q8TF01|Q8TF01-2 Arginine/serine-rich protein PNISR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11802.11802.3 19 19 5.124 4 2 2 0 967.4206 2740.3024 S311s S313s TMT10 311 (R) sPsPVPQEEHSDPEMTEEEK (E) S(0.99)PS(0.99)PVPQEEHS(0.0)DPEMT(0.0)EEEK K:TMT10,s:Phosphorylated S PNISR 92575.2 4 11 613.1 261.5 HUMAN 2 -26.8647 2.1478 GKVWRRESPTIVQGR-p P49590;S161-p GKVWRRESPTIVQGR 0.0883968510809889 0.0142043728136999 0.434333333333333 0.429333333333333 22.4598719463822 25.6235760551437 0.434333333333333 0.429333333333333 0.00567561339954918 0.00273931764196119 4.42789001474463 5.19676490698025 P49590 HARS2 P49590.S161.p_HARS2 P49590_S161s _1_1_161_161 P49590 P49590|P49590-2 Probable histidine--tRNA ligase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5424.5424.2 8.62 8.62 5.69 2 1 1 0 726.382 1371.7906 S161s TMT10 159 (R) REsPTIVQGR (Y) RES(0.99)PT(0.0)IVQGR s:Phosphorylated S HARS2 57629 2 3 2851.1 68.07 HUMAN 1 22.4599 25.6236 GKYCRPESQEHPEAD-p P40763;S691-p GKYCRPESQEHPEAD 0.201085945246228 0.0913005956786205 -0.198333333333333 0.196333333333333 13.5395252632375 13.7488624617906 -0.198333333333333 0.196333333333333 0.0442636755306486 0.0421806971954838 -2.60875616238437 2.64537139355612 P40763 STAT3 P40763.S691.p_STAT3 P40763_S691s _1_1_691_691 P40763 P40763|P40763-3|G8JLH9 Signal transducer and activator of transcription 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12969.12969.4 14.42 12.83 4.189 4 1 1 0 760.8616 2960.4613 S691s TMT10 686 (K) YCRPEsQEHPEADPGSAAPYLK (T) Y(0.0)CRPES(0.99)QEHPEADPGS(0.0)AAPY(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S STAT3 88865 1 2 2293.1 89.42 HUMAN 1 -13.5395 13.7489 GLAGLPGSPKKRVRI-p O43463-2;S402-p GLAGLPGSPKKRVRI 0.58813607527305 0.0033889360602677 -0.0883333333333333 -0.747333333333333 4.24496113667324 36.9332777486695 -0.0883333333333333 -0.747333333333334 0.376273719380102 0.000202615294486625 -0.963674002189808 -8.83392656042814 O43463 SUV39H1 O43463.2.S402.p_SUV39H1 O43463-2_S402s _1_1_402_402 O43463-2 O43463-2 Isoform 2 of Histone-lysine N-methyltransferase SUV39H1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25737.25737.3 19.68 18.7 13.819 2 1 1 0 677.0137 1949.0567 S402s TMT10 390 (R) MDSNFGLAGLPGsPK (K) MDS(0.0)NFGLAGLPGS(0.99)PK K:TMT10,s:Phosphorylated S SUV39H1 50345.2 19 1 3574.1 47.94 HUMAN 1 -4.245 -36.9333 GLAGPPASPGKAQPP-p Q9P206-3;S556-p GLAGPPASPGKAQPP 0.614872323703187 0.162833556054714 -0.104333333333333 -0.209333333333333 3.92003104658631 10.3634793908537 -0.104333333333333 -0.209333333333333 0.405505636583381 0.0919712440290723 -0.901812300646631 -2.04407540463422 Q9P206 KIAA1522 Q9P206.3.S556.p_KIAA1522 Q9P206-3_S556s _1_1_556_556 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12132.12342.2 14.92 14.92 99 1 1 1 0 745.4118 1409.8517 S556s TMT10 549 (K) GLAGPPAsPGK (A) GLAGPPAS(1.0)PGK K:TMT10,s:Phosphorylated S KIAA1522 108782.6 15 24 62.1 704.36 HUMAN 1 -3.92 -10.3635 GLAKSADSPLQASSA-p Q8TEK3;S1259-p GLAKSADSPLQASSA 0.906950104261102 0.20209328231634 0.026 -0.147666666666667 0.832613544825309 9.13546339125697 0.026 -0.147666666666667 0.825540996972559 0.122026361193882 0.231347685157571 -1.83114530253247 Q8TEK3 DOT1L Q8TEK3.S1259.p_DOT1L Q8TEK3_S1259s _1_1_1259_1259 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29359.29359.4 27.07 27.07 1.258 8 1 1 0 969.2339 3793.9649 S1259s TMT10 1256 (K) SADsPLQASSALSQNSLFTFRPALEEPSADAK (L) S(0.0)ADS(0.99)PLQAS(0.0)S(0.0)ALS(0.0)QNS(0.0)LFT(0.0)FRPALEEPS(0.0)ADAK K:TMT10,s:Phosphorylated S DOT1L 185648.6 4 24 132.1 534.85 HUMAN 1 0.8326 -9.1355 GLAKSFGSPNRAYTH-p P50613;S164-p GLAKSFGSPNRAYTH 0.744000442558004 0.72844195887989 0.0453333333333333 0.0406666666666667 2.44168924877743 1.89479469739975 0.0453333333333333 0.0406666666666667 0.56994254208404 0.646428551681304 0.604538420582938 0.485320156282616 P50613 CDK7 P50613.S164.p_CDK7 P50613_S164s _1_1_164_164 P50613 P50613|D6RAD4|D6R9G1 Cyclin-dependent kinase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8316.8316.3 15.06 11.02 1.557 5 1 1 0 710.3542 2049.0827 S164s TMT10 161 (K) SFGsPNRAYTHQVVTR (W) S(0.0)FGS(0.99)PNRAY(0.0)T(0.0)HQVVT(0.0)R s:Phosphorylated S CDK7 39323 7 1 4008.1 39.18 HUMAN 1 2.4417 1.8948 GLALKKKSIPQPTNA-p Q9Y4D1;S602-p GLALKKKSIPQPTNA 0.131244315374957 0.15641637371979 -0.284333333333333 0.199666666666667 18.227454776471 10.5957518804666 -0.284333333333333 0.199666666666667 0.0150402315472133 0.087181595344893 -3.50844485511198 2.08453001941063 Q9Y4D1 DAAM1 Q9Y4D1.S602.p_DAAM1 Q9Y4D1_S602s _1_1_602_602 Q9Y4D1 Q9Y4D1|Q9Y4D1-2|Q9Y4D1-3 Disheveled-associated activator of morphogenesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17751.17751.3 10.12 6.89 5.244 2 1 1 0 536.3043 1526.9307 S602s TMT10 602 (K) sIPQPTNALK (S) S(0.99)IPQPT(0.0)NALK K:TMT10,s:Phosphorylated S DAAM1 124041.8 2 3 2038.1 101.28 HUMAN 1 -18.2275 10.5958 GLAMKVATPPPSVLQ-p Q68CZ2;T1214-p GLAMKVATPPPSVLQ 0.259461956859561 0.0648373080033759 -0.180666666666667 0.22 11.1150003138179 15.8106577227626 -0.180666666666667 0.22 0.0773570622877312 0.0262382114538611 -2.176268759909 3.02980888824723 Q68CZ2 TNS3 Q68CZ2.T1214.p_TNS3 Q68CZ2_T1214t _1_1_1214_1214 Q68CZ2 Q68CZ2|Q68CZ2-2 Tensin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23070.23070.3 9.8 9.8 2.926 2 1 1 0 634.7017 1822.1202 T1214t TMT10 1212 (K) VAtPPPSVLQLNK (K) VAT(0.99)PPPS(0.0)VLQLNK K:TMT10,t:Phosphorylated T TNS3 156460.9 1 22 183.1 477.16 HUMAN 1 -11.115 15.8107 GLAPQQQSPKQQQPQ-p O15063;S723-p GLAPQQQSPKQQQPQ 0.971320196635447 0.0254361872297987 -0.00766666666666668 -0.477 0.2465729763037 21.6985079622055 -0.00766666666666669 -0.477 0.944806130016237 0.00676315286575322 -0.072502987847707 -4.2489102885472 O15063 KIAA0355 O15063.S723.p_KIAA0355 O15063_S723s _1_1_723_723 O15063 O15063 Uncharacterized protein KIAA0355 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14112.14112.4 16.5 14.89 4.447 3 1 1 0 740.3956 2878.5939 S723s TMT10 702 (R) APQAGAHTPLTPQPGLAPQQQsPK (Q) APQAGAHT(0.0)PLT(0.0)PQPGLAPQQQS(0.99)PK K:TMT10,s:Phosphorylated S KIAA0355 117272.9 1 1 5758.1 16.5 HUMAN 1 -0.2466 -21.6985 GLAREYGSPLKAYTP-p P21127;S589-p GLAREYGSPLKAYTP 0.468579597242891 0.428774222915823 -0.098 0.0776666666666667 6.07847357332319 4.8963039952563 -0.098 0.0776666666666667 0.24669062351519 0.323869164173382 -1.2985309568075 1.08480515677871 P21127 CDK11B P21127.S589.p_CDK11B P21127_S589s _1_1_589_589 P21127 P21127|J3QR44|A0A0D9SEN2|Q9UQ88|A0A0D9SER5|P21127-2|B7ZVY7|P21127-3|Q9UQ88-2|Q9UQ88-3|Q5QPR3|P21127-8|A0A0D9SEI3|Q9UQ88-4|P21127-9|J3QR29|Q5QPR4|P21127-6|P21127-10|P21127-5|P21127-4|Q9UQ88-10|P21127-12|Q9UQ88-5 Cyclin-dependent kinase 11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11907.12121.2 10.87 4.53 4.578 2 1 1 0 666.3548 1251.7349 S589s TMT10 586 (R) EYGsPLK (A) EY(0.0)GS(0.99)PLK K:TMT10,s:Phosphorylated S CDK11B 92876.5 6 7 421.1 320.22 HUMAN 1 -6.0785 4.8963 GLDEDRGSWRTADED-p Q14152;S1028-p GLDEDRGSWRTADED 0.98508819410506 0.827694190967233 0.00633333333333336 0.048 0.131899408918823 1.14970096735849 0.00633333333333336 0.048 0.970085602600297 0.767414327710641 0.0392669375476876 0.310987701257417 Q14152 EIF3A Q14152.S1028.p_EIF3A Q14152_S1028s _1_1_1028_1028 Q14152 Q14152|Q14152-2 Eukaryotic translation initiation factor 3 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8639.8639.3 10.67 5.33 99 1 1 1 0 500.5661 1419.7178 S1028s TMT10 1021 (R) GLDEDRGsWR (T) GLDEDRGS(1.0)WR s:Phosphorylated S EIF3A 166965.8 3 7 1342.1 151.61 HUMAN 1 0.1319 1.1497 GLDGLQYSPVQGGDP-p Q9Y6X2;S431-p GLDGLQYSPVQGGDP 0.851651836963964 0.708334710064715 -0.027 0.04 1.35101385180491 2.05885520317146 -0.027 0.04 0.732653476680617 0.622464344655479 -0.359748111229494 0.521735615982958 Q9Y6X2 PIAS3 Q9Y6X2.S431.p_PIAS3 Q9Y6X2_S431s _1_1_431_431 Q9Y6X2 Q9Y6X2|E9PHH8 E3 SUMO-protein ligase PIAS3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19612.19612.5 22.31 22.31 1.555 5 1 1 0 880.8504 4320.2628 S431s TMT10 412 (K) KEASEVCPPPGYGLDGLQYsPVQGGDPSENKK (K) KEAS(0.0)EVCPPPGY(0.0)GLDGLQY(0.0)S(0.99)PVQGGDPS(0.0)ENKK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PIAS3 69043.2 11 1 2486.1 81.51 HUMAN 1 -1.351 2.0589 GLDGMPGSPPPSQPD-p O94885;S486-p GLDGMPGSPPPSQPD 0.281389310516278 0.0274605623760349 -0.188666666666667 -0.483333333333333 10.4134085992897 21.1748602755603 -0.188666666666667 -0.483333333333334 0.0909199399200607 0.00762981437971005 -2.05363420750235 -4.13158899640132 O94885 SASH1 O94885.S486.p_SASH1 O94885_S486s _1_1_486_486 O94885 O94885 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15585.15585.5 28.46 27.97 8.433 8 1 1 0 918.8694 4510.3218 S486s TMT10 468 (K) KYSSSVSEQDSGLDGMPGsPPPSQPDPEHLDKPK (L) KY(0.0)S(0.0)S(0.0)S(0.0)VS(0.0)EQDS(0.0)GLDGMPGS(0.99)PPPS(0.0)QPDPEHLDKPK K:TMT10,s:Phosphorylated S SASH1 137734.8 1 9 295.1 379.69 HUMAN 1 -10.4134 -21.1749 GLDINMDSRIIHENI-p Q96H22-3;S235-p GLDINMDSRIIHENI 0.858167579874027 0.677846377479218 -0.0353333333333333 0.043 1.29425995678598 2.30706703335141 -0.0353333333333334 0.043 0.742290674219433 0.587886241902156 -0.346144496020182 0.575708538653101 Q96H22 CENPN Q96H22.3.S235.p_CENPN Q96H22-3_S235s _1_1_235_235 Q96H22-3 Q96H22-3|Q96H22-4|Q96H22-5 Isoform 3 of Centromere protein N HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21608.21608.3 7.31 7.31 7.314 2 1 1 0 510.579 1449.7569 S235s TMT10 226 (R) SLGLDINMDsR (I) S(0.0)LGLDINMDS(0.99)R s:Phosphorylated S CENPN 41478.9 1 3 2611.1 76.75 HUMAN 1 -1.2943 2.3071 GLDISHISQRLESLS-p H3BVG0;S75-p GLDISHISQRLESLS 0.387340319727748 0.344351785615018 0.118333333333333 0.0973333333333333 7.61745997347663 6.13309984188532 0.118333333333333 0.0973333333333333 0.173082836022951 0.243607141523563 1.56872079656983 1.30792208922515 H3BVG0 NotFound H3BVG0.S75.p_NotFound H3BVG0_S75s _1_1_75_75 H3BVG0 H3BVG0|Q8N1F7 Nuclear pore complex protein Nup93 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11550.11555.3 11.73 11.73 2.116 2 1 1 0 478.9153 1354.764 S75s TMT10 68 (R) GLDISHIsQR (L) GLDIS(0.0)HIS(0.99)QR s:Phosphorylated S NUP93 100351.7 1 5 862.1 210.52 HUMAN 1 7.6175 6.1331 GLDLSSRSLLGIDTE-p P49454;S1750-p GLDLSSRSLLGIDTE 0.724756833550168 0.0609378484730873 0.0626666666666666 -0.465333333333333 2.64746417708359 16.1867390483279 0.0626666666666666 -0.465333333333333 0.543567625162626 0.0240616882230909 0.647851331254065 -3.10190515481003 P49454 CENPF P49454.S1750.p_CENPF P49454_S1750s _1_1_1750_1750 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31271.31271.3 17.33 17.33 1.203 4 1 1 0 1003.1928 2927.5999 S1750s TMT10 1739 (R) LQLQGLDLSSRsLLGIDTEDAIQGR (N) LQLQGLDLS(0.0)S(0.0)RS(0.99)LLGIDT(0.0)EDAIQGR s:Phosphorylated S CENPF 371067.2 4 19 47.1 771.73 HUMAN 1 2.6475 -16.1867 GLDSGAETEEEKDTW-p E9PGC8;T854-p GLDSGAETEEEKDTW 0.938121433931205 0.830496947579404 0.0116666666666667 0.022 0.54048284257869 1.12839691401161 0.0116666666666667 0.022 0.882981726278133 0.771188080708279 0.154277624885619 0.305751766996667 E9PGC8 NotFound E9PGC8.T854.p_NotFound E9PGC8_S850sT854t_2_2_850_854 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19007.19007.4 14.58 14.38 5.454 3 2 2 0 725.8339 2740.3768 S850s T854t TMT10 847 (R) GLDsGAEtEEEKDTWEEK (K) GLDS(0.99)GAET(0.99)EEEKDT(0.0)WEEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T MAP1A 332906.7 11 48 20.1 1016.98 HUMAN 1 0.5405 1.1284 GLDVERLSLRNFFHH-p Q6L9W6;S975-p GLDVERLSLRNFFHH 0.377998805237944 0.701054130123939 -0.177333333333333 -0.0773333333333334 7.80912362497204 2.12020983061483 -0.177333333333333 -0.0773333333333334 0.165610411965309 0.613732351795213 -1.60203025828193 -0.535198273178142 Q6L9W6 B4GALNT3 Q6L9W6.S975.p_B4GALNT3 Q6L9W6_S975sS985s_2_2_975_985 Q6L9W6 Q6L9W6 Beta-1,4-N-acetylgalactosaminyltransferase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10464.10464.3 7.71 1.53 99 2 2 2 0 815.742 2284.298 S975s N978n S985s TMT10 974 (R) LsLRnFFHHFHsKR (G) LS(1.0)LRN(1.0)FFHHFHS(1.0)KR K:TMT10,s:Phosphorylated S,n:Deamidated B4GALNT3 115429.2 1 2 6275.1 12.65 HUMAN 1 -7.8091 -2.1202 GLEDDQRSMGYDDLD-p O60716-3;S288-p GLEDDQRSMGYDDLD 0.483120816011782 0.357756720145346 0.0923333333333333 0.098 5.8185402522817 5.92251151335783 0.0923333333333334 0.098 0.261906317805963 0.255710669128816 1.2521697601368 1.27044875794075 O60716 CTNND1 O60716.3.S288.p_CTNND1 O60716-3_S288s_1_1_288_288 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-24 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22882.22882.4 28.17 28.17 3.04 7 1 1 0 1014.923 3960.6989 S288s M289m TMT10 275 (R) FHPEPYGLEDDQRsmGYDDLDYGMMSDYGTAR (R) FHPEPY(0.0)GLEDDQRS(0.99)M(0.99)GY(0.0)DDLDY(0.0)GM(0.0)M(0.0)S(0.0)DY(0.0)GT(0.0)AR s:Phosphorylated S,m:Oxidized methionine CTNND1 105545.3 38 18 21.1 1014.17 HUMAN 1 5.8185 5.9225 GLEDDTRSLAADDEG-p O00192;S267-p GLEDDTRSLAADDEG 0.308639920982799 0.041482506309154 0.150333333333333 0.271 9.54284138828538 18.5267333953614 0.150333333333333 0.271 0.111100461042548 0.0140386924676865 1.90238370064012 3.56663332105285 O00192 ARVCF O00192.S267.p_ARVCF O00192_S267s _1_1_267_267 O00192 O00192|E9PDC3|O00192-2|C9JJX6 Armadillo repeat protein deleted in velo-cardio-facial syndrome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22345.22345.4 19.29 17.06 1.171 7 1 1 0 1145.03 4497.1167 S267s TMT10 249 (R) SLPERFQAEPYGLEDDTRsLAADDEGGPELEPDYGTATR (R) S(0.0)LPERFQAEPY(0.0)GLEDDT(0.0)RS(0.99)LAADDEGGPELEPDY(0.0)GT(0.0)AT(0.0)R s:Phosphorylated S ARVCF 105324.7 4 2 772.1 227.53 HUMAN 1 9.5428 18.5267 GLEDENNSPLEDEES-p Q9HAW4;S225-p GLEDENNSPLEDEES 0.476784104106263 0.063731285855024 -0.0956666666666667 -0.216 5.92199197401332 15.9201359558797 -0.0956666666666667 -0.216 0.25574126120532 0.0255850579163278 -1.27065462304705 -3.05072821470311 Q9HAW4 CLSPN Q9HAW4.S225.p_CLSPN Q9HAW4_S225s _1_1_225_225 Q9HAW4 Q9HAW4|Q9HAW4-3|E7ESG2|Q9HAW4-2 Claspin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29819.29819.3 26.3 26.3 10.69 4 1 1 0 1063.8147 3109.4534 S225s TMT10 213 (K) DLFETGLEDENNsPLEDEESLESIR (A) DLFET(0.0)GLEDENNS(0.99)PLEDEES(0.0)LES(0.0)IR s:Phosphorylated S CLSPN 151718.8 5 2 506.1 289.61 HUMAN 1 -5.922 -15.9201 GLEDVRPSVESLLDE-p A0A1B0GTU4;S216-p GLEDVRPSVESLLDE 0.767866039421668 0.0955792974893037 -0.0476666666666667 0.201 2.19749587712714 13.4866330264018 -0.0476666666666667 0.201 0.602907119463793 0.0448060539388391 -0.55210792421398 2.59764700619474 A0A1B0GTU4 NotFound A0A1B0GTU4.S216.p_NotFound A0A1B0GTU4_S216s _1_1_216_216 A0A1B0GTU4 A0A1B0GTU4|A0A1B0GU60|P49023-3|F5GZ78|P49023-2|P49023-4 Paxillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36496.36496.4 27.36 27.77 1.181 8 1 1 0 1115.3048 4378.2285 S216s TMT10 209 (R) GLEDVRPsVESLLDELESSVPSPVPAITVNQGEMSSPQR (V) GLEDVRPS(0.99)VES(0.0)LLDELES(0.0)S(0.0)VPS(0.0)PVPAIT(0.0)VNQGEMS(0.0)S(0.0)PQR s:Phosphorylated S PXN 117843.4 5 7 288.1 382.57 HUMAN 1 -2.1975 13.4866 GLEGKADTPGPEDGG-p O14686-3;T1846-p GLEGKADTPGPEDGG 0.625103302677489 0.605685428392226 -0.069 0.092 3.78898834902375 2.95530253138617 -0.069 0.0919999999999999 0.417927707909687 0.506372074200817 -0.87657336505519 0.711220054093898 O14686 KMT2D O14686.3.T1846.p_KMT2D O14686-3_T1846t _1_1_1846_1846 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9991.9991.3 19.89 19.89 99 1 1 1 0 722.369 2085.1228 T1846t Hydrogen 1839 (R) GLEGKADtPGPEDGGVK (A) GLEGKADT(1.0)PGPEDGGVK K:TMT10-Lys-Only,t:Phosphorylated T KMT2D 600227.3 2 16 17.1 1042.08 HUMAN 1 -3.789 2.9553 GLEGNANSPAHLRGP-p Q8NFC6;S2501-p GLEGNANSPAHLRGP 0.446974032116271 0.0121567318783698 0.258666666666667 0.723333333333333 6.44967316661241 26.7428279015987 0.258666666666667 0.723333333333333 0.226481474245998 0.00211698221675977 1.36429404215225 5.49167558365932 Q8NFC6 BOD1L1 Q8NFC6.S2501.p_BOD1L1 Q8NFC6_S2501s _1_1_2501_2501 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11404.11404.5 19.54 15.64 10.441 6 1 1 0 743.3816 3632.9145 S2501s TMT10 2494 (R) GLEGNANsPAHLRGPEQTSGQTAKDPSVSIR (Y) GLEGNANS(0.99)PAHLRGPEQT(0.0)S(0.0)GQT(0.0)AKDPS(0.0)VS(0.0)IR K:TMT10,s:Phosphorylated S BOD1L1 332628.7 3 20 97.1 603.4 HUMAN 1 6.4497 26.7428 GLEIELQSQLSMKAA-p P08727;S312-p GLEIELQSQLSMKAA 0.0635370415880919 0.38474683550477 -0.409666666666667 0.13 25.9646165267498 5.51333015183083 -0.409666666666667 0.13 0.00253243523432204 0.280974550311611 -5.29230680457642 1.19708889914566 P08727 KRT19 P08727.S312.p_KRT19 P08727_S312s _1_1_312_312 P08727 O77727|P13646|P13646-3|K7ERE3|P08727|P13646-2 Keratin, type I cytoskeletal 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.33049.33049.3 15.95 15.95 4.662 3 1 1 0 786.0919 2276.2936 S312s TMT10 302 (R) TLQGLEIELQsQLSMK (A) T(0.0)LQGLEIELQS(0.99)QLS(0.0)MK K:TMT10,s:Phosphorylated S KRT19 44105.2 3 18 383.1 334.07 HUMAN 1 -25.9646 5.5133 GLELALSSDAESAAG-p O94964-2;S142-p GLELALSSDAESAAG 0.116602871314905 0.0511160720134955 0.301666666666667 0.249666666666667 19.4172108785819 17.2440151563955 0.301666666666667 0.249666666666667 0.0114361254864027 0.0188624666254802 3.75497878600326 3.30828500854607 O94964 SOGA1 O94964.2.S142.p_SOGA1 O94964-2_S141sS142s_2_2_141_142 O94964-2 O94964-2 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35833.36245.4 21.61 21.61 2.771 3 2 2 0 636.5641 2383.303 S141s S142s TMT10 133 (R) LLGLELALssDAESAAGGPAGVR (T) LLGLELALS(0.99)S(0.99)DAES(0.0)AAGGPAGVR s:Phosphorylated S SOGA1 185623.3 3 25 215.1 433.51 HUMAN 1 19.4172 17.244 GLENGLGSPFGKWTL-p Q9P107-2;S454-p GLENGLGSPFGKWTL 0.80614700681523 0.82064658718566 -0.0396666666666667 -0.0256666666666667 1.80505077562276 1.20148311014861 -0.0396666666666667 -0.0256666666666667 0.659925518686585 0.758318565977377 -0.465182831635223 -0.32364895347917 Q9P107 GMIP Q9P107.2.S454.p_GMIP Q9P107-2_S454s _1_1_454_454 Q9P107-2 Q9P107-2 Isoform 2 of GEM-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27106.27106.3 11.01 9.68 2.732 6 1 1 0 995.8253 2905.4831 S454s TMT10 434 (R) SLDSPTSSPDLGDGLENGLGsPFGK (W) S(0.0)LDS(0.0)PT(0.0)S(0.0)S(0.0)PDLGDGLENGLGS(0.99)PFGK K:TMT10,s:Phosphorylated S GMIP 104928.1 1 16 1251.2 161.9 HUMAN 1 -1.8051 -1.2015 GLEPAAPSPRLRPEE-p Q9ULL5-3;S865-p GLEPAAPSPRLRPEE 0.237912707669171 0.22353150847304 -0.173666666666667 -0.122666666666667 11.9393811970459 8.57133567514135 -0.173666666666667 -0.122666666666667 0.0639825994368281 0.138952521622281 -2.3215871067215 -1.73356664324323 Q9ULL5 PRR12 Q9ULL5.3.S865.p_PRR12 Q9ULL5-3_S865s _1_1_865_865 Q9ULL5-3 Q9ULL5-3|Q9ULL5-2 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6660.6660.3 7.66 7.66 7.658 2 1 1 0 509.922 1447.7855 S865s TMT10 856 (R) SHGLEPAAPsPR (L) S(0.0)HGLEPAAPS(0.99)PR s:Phosphorylated S PRR12 212010 1 10 182.1 477.91 HUMAN 1 -11.9394 -8.5713 GLEPGPDSPGGSSPP-p Q92508;S1391-p GLEPGPDSPGGSSPP 0.142551392436685 0.0145118438020208 -0.265 -0.507333333333333 17.2809448073767 25.4726255110824 -0.265 -0.507333333333334 0.0187027521784648 0.00283620389357552 -3.3181757512766 -5.15788597392503 Q92508 PIEZO1 Q92508.S1391.p_PIEZO1 Q92508_S1391s _1_1_1391_1391 Q92508 Q92508 Piezo-type mechanosensitive ion channel component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12281.12281.4 24.03 19.15 4.388 5 1 1 0 834.922 3256.6962 S1391s TMT10 1372 (R) SRPQDTLGPKDPGLEPGPDsPGGSSPPR (R) S(0.0)RPQDT(0.0)LGPKDPGLEPGPDS(0.99)PGGS(0.0)S(0.0)PPR K:TMT10,s:Phosphorylated S PIEZO1 290036.4 4 2 1703.1 120.26 HUMAN 1 -17.2809 -25.4726 GLEQAILSPGQNSGN-p Q9NRA8;S374-p GLEQAILSPGQNSGN 0.0889445613088177 0.0136432969333656 -0.375333333333333 -0.5 22.3854591953317 25.9173613086855 -0.375333333333333 -0.5 0.00577369822077878 0.00256014090775918 -4.41063498199274 -5.27303331471195 Q9NRA8 EIF4ENIF1 Q9NRA8.S374.p_EIF4ENIF1 Q9NRA8_S374s_1_1_374_374 Q9NRA8 Q9NRA8|B1AKL4|Q9NRA8-2|Q9NRA8-3 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.36549.36549.4 23.96 19.9 0 3 1 1 0 1226.384 4821.5537 S374s N381n Hydrogen 365 (R) LAGLEQAILsPGQNSGnYFAPIPLEDHAENKVDILEMLQK (A) LAGLEQAILS(0.99)PGQN(0.50)S(0.0)GN(0.50)Y(0.0)FAPIPLEDHAEN(0.0)KVDILEMLQK K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated EIF4ENIF1 108541.3 5 11 150.1 511.59 HUMAN 1 -22.3855 -25.9174 GLERYGLSAAAAAAA-p Q9H1B7;S152-p GLERYGLSAAAAAAA 0.766667060694937 0.951927526980198 0.0496666666666667 0.0250000000000001 2.21200444518691 0.304545170699126 0.0496666666666667 0.0250000000000001 0.600896335440467 0.932278101145491 0.555256386814718 0.0889984474922278 Q9H1B7 IRF2BPL Q9H1B7.S152.p_IRF2BPL Q9H1B7_S152s _1_1_152_152 Q9H1B7 Q9H1B7 Interferon regulatory factor 2-binding protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.35850.35850.3 23.63 23.62 4.123 2 1 1 0 705.0255 2033.0977 S152s TMT10 149 (R) YGLsAAAAAAAAAAAAVEQR (S) Y(0.0)GLS(0.99)AAAAAAAAAAAAVEQR s:Phosphorylated S IRF2BPL 83627.3 1 2 282.1 386.92 HUMAN 1 2.212 0.3045 GLETRRLSLPSSKAK-p Q8NCD3;S486-p GLETRRLSLPSSKAK 0.349862411783795 0.00158916356848782 -0.144666666666667 -0.902333333333333 8.47353826370543 44.974220207283 -0.144666666666667 -0.902333333333334 0.142117046597595 3.1811048168573e-05 -1.71722443377 -12.6120526487972 Q8NCD3 HJURP Q8NCD3.S486.p_HJURP Q8NCD3_S486s _1_1_486_486 Q8NCD3 Q8NCD3|Q8NCD3-2|Q8NCD3-3 Holliday junction recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13284.13284.3 9.53 4.83 5.656 3 1 1 0 475.9459 1345.8568 S486s TMT10 484 (R) RLsLPSSK (A) RLS(0.99)LPS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S HJURP 84336.4 2 9 596.1 263.83 HUMAN 1 -8.4735 -44.9742 GLEVTAYSPLGSSDR-p P14550;S211-p GLEVTAYSPLGSSDR 0.791939334471681 0.37772298448231 0.045 0.108666666666667 1.95432706548163 5.61642431770172 0.045 0.108666666666667 0.637627873117794 0.274383232516489 0.49866351602489 1.21564598890681 P14550 AKR1A1 P14550.S211.p_AKR1A1 P14550_S211s _1_1_211_211 P14550 P14550 Alcohol dehydrogenase [NADP(+)] HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19604.19604.3 13.81 13.81 3.137 5 1 1 0 620.9705 1780.9279 S211s TMT10 204 (R) GLEVTAYsPLGSSDR (A) GLEVT(0.0)AY(0.0)S(0.99)PLGS(0.0)S(0.0)DR s:Phosphorylated S AKR1A1 36914.7 2 2 4017.1 39.05 HUMAN 1 1.9543 5.6164 GLFDEYGSKKSDYIK-p P14625;S403-p GLFDEYGSKKSDYIK 0.295154464069677 0.0816523943626088 -0.246333333333333 0.24 9.98659203746025 14.4219265481946 -0.246333333333333 0.24 0.100309206807814 0.0361249575291895 -1.97938112061189 2.76899755129375 P14625 HSP90B1 P14625.S403.p_HSP90B1 P14625_S403s _1_1_403_403 P14625 P14625|Q58FF3 Endoplasmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20080.20080.2 11.19 11.19 4.683 2 1 1 0 777.3867 1473.799 S403s TMT10 396 (R) GLFDEYGsK (K) GLFDEY(0.0)GS(0.99)K K:TMT10,s:Phosphorylated S HSP90B1 92752.5 2 46 43.3 810.87 HUMAN 1 -9.9866 14.4219 GLFLREGSASTEVLR-p O75643;S756-p GLFLREGSASTEVLR 0.52777020073265 0.805829683546797 0.105 0.029 5.13521856144973 1.31300551493272 0.105 0.029 0.306533641054691 0.739093611706183 1.12878085253704 0.350612866434386 O75643 SNRNP200 O75643.S756.p_SNRNP200 O75643_S756s _1_1_756_756 O75643 O75643 U5 small nuclear ribonucleoprotein 200 kDa helicase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26252.26252.4 9.58 9.58 1.168 5 1 1 0 837.9251 3268.7248 S756s TMT10 746 (K) DTLGLFLREGsASTEVLRTEAEQCK (N) DT(0.0)LGLFLREGS(0.99)AS(0.0)T(0.0)EVLRT(0.0)EAEQCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SNRNP200 246157.8 1 3 2427.1 83.94 HUMAN 1 5.1352 1.313 GLFNELASPFENEFK-p P15336;S90-p GLFNELASPFENEFK 0.95578545369103 0.205714820411659 0.00833333333333333 0.130333333333333 0.384297633255143 9.03623240713605 0.00833333333333333 0.130333333333333 0.915314277355049 0.124846611430489 0.111400532952087 1.81397977210869 P15336 ATF2 P15336.S90.p_ATF2 P15336_S90s _1_1_90_90 P15336 P15336|P15336-5|P15336-4|E9PBF9|B8ZZU6|E9PEK8|P15336-7|P15336-3 Cyclic AMP-dependent transcription factor ATF-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36250.36250.3 18.66 18.66 99 1 1 1 0 971.1239 2831.3962 S90s TMT10 78 (K) NCEEVGLFNELAsPFENEFK (K) NCEEVGLFNELAS(1.0)PFENEFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATF2 54821.7 4 2 1174.1 169.92 HUMAN 1 0.3843 9.0362 GLFQDEDSCSDCSYR-p Q8NEM2;S42-p GLFQDEDSCSDCSYR 0.863832146845422 0.0255135823897683 0.0296666666666667 -0.524333333333333 1.23881920220899 21.6790431022877 0.0296666666666667 -0.524333333333333 0.751827279602981 0.0067935330065009 0.332755584310222 -4.24451378448047 Q8NEM2 SHCBP1 Q8NEM2.S42.p_SHCBP1 Q8NEM2_S42s _1_1_42_42 Q8NEM2 Q8NEM2 SHC SH2 domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16352.16352.3 18.63 18.63 1.379 4 1 1 0 716.6147 2067.8585 S42s TMT10 35 (K) GLFQDEDsCSDCSYR (D) GLFQDEDS(0.99)CS(0.0)DCS(0.0)Y(0.0)R C:Carbamidomethylation,s:Phosphorylated S SHCBP1 76773.1 2 1 1723.1 119.45 HUMAN 1 1.2388 -21.679 GLFQGQNSLLH____-p Q96AB3-2;S218-p GLFQGQNSLLH____ 0.235621777934373 0.00818760311846468 0.219333333333333 0.462 12.0233762442544 29.7023371473585 0.219333333333333 0.462 0.0627570290351069 0.00107094282432494 2.33648155139151 6.33216174154537 Q96AB3 ISOC2 Q96AB3.2.S218.p_ISOC2 Q96AB3-2_S218s _1_1_218_218 Q96AB3-2 Q96AB3-2|Q96AB3-3 Isoform 2 of Isochorismatase domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.34644.34644.3 22.13 22.13 12.334 2 1 1 0 995.8783 2905.6552 S218s TMT10 199 (K) LIKEPAPDSGLLGLFQGQNsLLH (-) LIKEPAPDS(0.0)GLLGLFQGQNS(0.99)LLH K:TMT10,s:Phosphorylated S ISOC2 24382 6 1 3978.1 39.87 HUMAN 1 12.0234 29.7023 GLGARRWSEPSSQKS-p Q9BQK8-2;S412-p GLGARRWSEPSSQKS 0.265368066946808 0.0217325297470457 -0.201666666666667 0.5 10.9272692399515 22.7328897356945 -0.201666666666667 0.5 0.0807742763696698 0.00532980139828293 -2.14337231994622 4.4866155390005 Q9BQK8 LPIN3 Q9BQK8.2.S412.p_LPIN3 Q9BQK8-2_S412s _1_1_412_412 Q9BQK8-2 Q9BQK8-2 Isoform 2 of Phosphatidate phosphatase LPIN3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7968.7968.2 10.45 10.45 1.464 3 1 1 0 821.9209 1562.8691 S412s TMT10 410 (R) RWsEPSSQK (S) RWS(0.99)EPS(0.0)S(0.0)QK K:TMT10,s:Phosphorylated S LPIN3 94213.1 5 6 1554.1 131.9 HUMAN 1 -10.9273 22.7329 GLGARTYSQGDCSYS-p Q96LL9;S39-p GLGARTYSQGDCSYS 0.0160165243485592 0.000952253650599092 -1.30333333333333 -1.26 42.3173896488443 53.5480974249916 -1.30333333333333 -1.26 5.86490572017815e-05 4.41763934717598e-06 -11.252443840228 -18.289150356501 Q96LL9 DNAJC30 Q96LL9.S39.p_DNAJC30 Q96LL9_S39s _1_1_39_39 Q96LL9 Q96LL9 DnaJ homolog subfamily C member 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6119.6119.2 14.35 14.35 2.512 6 1 1 0 816.8324 1552.6899 S39s TMT10 37 (R) TYsQGDCSYSR (T) T(0.0)Y(0.0)S(0.99)QGDCS(0.0)Y(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S DNAJC30 26075 1 1 2713.1 73.01 HUMAN 1 -42.3174 -53.5481 GLGCRLHSAPNLSDL-p O75385;S556-p GLGCRLHSAPNLSDL 0.615123191884599 0.0199261352687015 -0.136666666666667 -0.398 3.91677167358489 23.3218742200891 -0.136666666666667 -0.398 0.405810082130731 0.00465385210807821 -0.901186659037745 -4.62565841343845 O75385 ULK1 O75385.S556.p_ULK1 O75385_S556s _1_1_556_556 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16272.16272.5 19.55 19.55 5.455 2 1 1 0 465.0641 2241.3232 S556s TMT10 554 (R) LHsAPNLSDLHVVRPK (L) LHS(0.99)APNLS(0.0)DLHVVRPK K:TMT10,s:Phosphorylated S ULK1 113656.3 2 11 351.1 351.01 HUMAN 1 -3.9168 -23.3219 GLGKGQESPLKKSPS-p Q9Y2H2;S935-p GLGKGQESPLKKSPS 0.232413765653254 0.0391085718923723 -0.36 -0.300666666666667 12.1805372091066 18.9001282088411 -0.36 -0.300666666666667 0.0605266000554016 0.0128821152161191 -2.36439835675226 -3.64360789686739 Q9Y2H2 INPP5F Q9Y2H2.S935.p_INPP5F Q9Y2H2_S935s _1_1_935_935 Q9Y2H2 Q9Y2H2|Q9Y2H2-4 Phosphatidylinositide phosphatase SAC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8295.8295.2 9.54 4.26 99 1 1 1 0 648.8518 1216.7302 S935s TMT10 932 (K) GQEsPLK (K) GQES(1.0)PLK K:TMT10,s:Phosphorylated S INPP5F 129431.7 3 4 928.1 199.49 HUMAN 1 -12.1805 -18.9001 GLGLDAGSEGDPPRD-p Q5T5X7;S489-p GLGLDAGSEGDPPRD 0.176053518103929 0.0333527784392921 -0.248666666666667 0.319666666666667 14.9934082796713 19.9084389544039 -0.248666666666667 0.319666666666667 0.0316708100857978 0.0102130652027264 -2.87721498080164 3.85574097147383 Q5T5X7 BEND3 Q5T5X7.S489.p_BEND3 Q5T5X7_S489s _1_1_489_489 Q5T5X7 Q5T5X7 BEN domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30132.30132.4 22.36 21.37 2.345 6 1 1 0 1122.782 4408.1026 S489s TMT10 476 (R) INDELEGLGLDAGsEGDPPRDDCYDSSSLPDDISVVK (V) INDELEGLGLDAGS(0.99)EGDPPRDDCY(0.0)DS(0.0)S(0.0)S(0.0)LPDDIS(0.0)VVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BEND3 95614 3 4 2481.1 81.71 HUMAN 1 -14.9934 19.9084 GLGLGCPSPCKRLDE-p Q9ULL5-3;S1361-p GLGLGCPSPCKRLDE 0.885585284476882 0.857608808902331 -0.0323333333333333 0.0183333333333334 1.04065080779926 0.939533910544505 -0.0323333333333333 0.0183333333333334 0.786927856545408 0.805464879907937 -0.284044399704103 0.258616338488734 Q9ULL5 PRR12 Q9ULL5.3.S1361.p_PRR12 Q9ULL5-3_S1361s _1_1_1361_1361 Q9ULL5-3 Q9ULL5-3|Q9ULL5-2 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.39592.39592.5 12.4 12.42 2.578 4 1 1 0 963.2781 4732.4268 S1361s TMT10 1321 (R) GLQPQPPATPAVPHPPPSGAFGLGGALEAAESEGLGLGCPsPCK (R) GLQPQPPAT(0.0)PAVPHPPPS(0.0)GAFGLGGALEAAES(0.0)EGLGLGCPS(0.99)PCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRR12 212010 2 17 182.1 477.91 HUMAN 1 -1.0407 0.9395 GLGLGLPSPRGPGLN-p Q92733;S114-p GLGLGLPSPRGPGLN 0.706604154820368 0.0584649017029258 -0.059 -0.281 2.83274839843917 16.4224696524624 -0.059 -0.281 0.520864981479632 0.022790457047409 -0.686231946976564 -3.14743789770806 Q92733 PRCC Q92733.S114.p_PRCC Q92733_S114s _1_1_114_114 Q92733 Q92733 Proline-rich protein PRCC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37483.37483.4 25.29 25.29 9.423 2 1 1 0 1027.2979 4026.2054 S114s TMT10 77 (R) LQPPPPLPFGLGGFPPPPGVSPAEAAGVGEGLGLGLPsPR (G) LQPPPPLPFGLGGFPPPPGVS(0.0)PAEAAGVGEGLGLGLPS(0.99)PR s:Phosphorylated S PRCC 52416.8 5 3 1101.1 177.58 HUMAN 1 -2.8327 -16.4225 GLGLSGGSPGASTPV-p Q8N612-2;S911-p GLGLSGGSPGASTPV 0.344499746607644 0.865180315175624 0.141 0.0176666666666667 8.5951352319912 0.88661792311867 0.141 0.0176666666666667 0.138193137421454 0.815338983700715 1.73827849790681 0.245167019376663 Q8N612 FAM160A2 Q8N612.2.S911.p_FAM160A2 Q8N612-2_S911s _1_1_911_911 Q8N612-2 Q8N612-2 Isoform 2 of FTS and Hook-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24725.24725.3 17.84 17.84 1.335 5 1 1 0 764.7317 2212.2135 S911s TMT10 901 (R) DGAGLGLSGGsPGASTPVLLTR (G) DGAGLGLS(0.0)GGS(0.99)PGAS(0.0)T(0.0)PVLLT(0.0)R s:Phosphorylated S FAM160A2 108162.9 1 7 2416.1 84.39 HUMAN 1 8.5951 0.8866 GLGMTLPSPSFTVRD-p Q9UPP1;S175-p GLGMTLPSPSFTVRD 0.706419353402032 0.646451769518778 0.072 0.0853333333333333 2.83811199368834 2.58297437418943 0.072 0.0853333333333333 0.520222103286982 0.551699464710207 0.687334737309599 0.634275606981817 Q9UPP1 PHF8 Q9UPP1.S175.p_PHF8 Q9UPP1_S175s _1_1_175_175 Q9UPP1 Q9UPP1|Q9UPP1-2|Q9UPP1-3 Histone lysine demethylase PHF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27183.27183.3 14.75 13.55 3.138 4 1 1 0 629.6472 1806.9621 S175s TMT10 167 (K) DGLGMTLPsPSFTVR (D) DGLGMT(0.0)LPS(0.99)PS(0.0)FT(0.0)VR s:Phosphorylated S PHF8 118946 1 18 376.1 336.84 HUMAN 1 2.8381 2.583 GLGRAHRSPASPRVP-p Q9Y5U2;S143-p GLGRAHRSPASPRVP 0.792632612057571 0.013534758309085 -0.0393333333333333 -0.401333333333333 1.94663665850279 25.9713558705845 -0.0393333333333334 -0.401333333333333 0.638757973137919 0.00252850847099265 -0.496951645304015 -5.28713775579984 Q9Y5U2 TSSC4 Q9Y5U2.S143.p_TSSC4 Q9Y5U2_S143sS146s_2_2_143_146 Q9Y5U2 Q9Y5U2|Q9Y5U2-2|A6NCC9 Protein TSSC4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10753.10753.5 14.36 14.36 6.827 3 2 2 0 565.6784 2664.432 S143s S146s TMT10 140 (R) AHRsPAsPRVPPVPDYVAHPER (W) AHRS(0.99)PAS(0.99)PRVPPVPDY(0.0)VAHPER s:Phosphorylated S TSSC4 34496.1 4 4 2724.1 72.68 HUMAN 1 -1.9466 -25.9714 GLGSASGSVGRVAMS-p Q9BU76;S127-p GLGSASGSVGRVAMS 0.37546094355811 0.411603690597946 0.123666666666667 -0.0836666666666666 7.86818040077869 5.1284573246511 0.123666666666667 -0.0836666666666667 0.163373630442209 0.3070112341998 1.61228482726648 -1.12731446482612 Q9BU76 C1orf35 Q9BU76.S127.p_C1orf35 Q9BU76_S127s _1_1_127_127 Q9BU76 Q9BU76|Q9BU76-4|Q9BU76-3 Multiple myeloma tumor-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20894.20894.2 13.56 9.43 1.184 3 1 1 0 741.8986 1402.8215 S127s TMT10 118 (R) LLGLGSASGsVGR (V) LLGLGS(0.0)AS(0.0)GS(0.99)VGR s:Phosphorylated S MMTAG2 29696.6 2 2 2785.1 70.71 HUMAN 1 7.8682 -5.1285 GLGTDEDSLIEIICS-p P07355;S127-p GLGTDEDSLIEIICS 0.513391553452534 0.0137719194356848 0.104 0.362666666666667 5.34978914129621 25.8454786787199 0.104 0.362666666666667 0.291756866438776 0.00260286792785462 1.16779001218242 5.25429830882978 P07355 ANXA2 P07355.S127.p_ANXA2 P07355_S127s _1_1_127_127 P07355 P07355-2|A6NMY6|H0YMU9 Annexin A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29835.30289.3 19.54 19.54 5.288 3 1 1 0 696.3357 2007.0266 S127s TMT10 120 (K) GLGTDEDsLIEIICSR (T) GLGT(0.0)DEDS(0.99)LIEIICS(0.0)R C:Carbamidomethylation,s:Phosphorylated S ANXA2 38831.6 2 10 537.1 277.57 HUMAN 1 5.3498 25.8455 GLGTDEESILTLLTS-p P08758;S37-p GLGTDEESILTLLTS 0.55876283968831 0.028272155377395 -0.106666666666667 0.423 4.66617049997005 20.9833929282181 -0.106666666666667 0.423 0.341493899673107 0.00797371496910425 -1.04251086160178 4.08917913457532 P08758 ANXA5 P08758.S37.p_ANXA5 P08758_S37s _1_1_37_37 P08758 P08758|E9PHT9 Annexin A5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33819.33819.3 13.32 13.32 2.52 5 1 1 0 672.0169 1934.0644 S37s TMT10 30 (K) GLGTDEEsILTLLTSR (S) GLGT(0.0)DEES(0.99)ILT(0.0)LLT(0.0)S(0.0)R s:Phosphorylated S ANXA5 35993.2 1 1 3317.1 54.06 HUMAN 1 -4.6662 20.9834 GLGTPLKSPSLAKKD-p O15018;S850-p GLGTPLKSPSLAKKD 0.740905407588996 0.115110560339508 -0.0656666666666667 -0.215333333333333 2.47154473913327 12.3870557056096 -0.0656666666666667 -0.215333333333333 0.566037919579476 0.0577157614120599 -0.610869902972016 -2.39993849106004 O15018 PDZD2 O15018.S850.p_PDZD2 O15018_S850s _1_1_850_850 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18215.18215.3 15.4 15.4 1.72 5 1 1 0 874.49 2541.4855 S850s TMT10 837 (K) EANSSPGLGTPLKsPSLAK (K) EANS(0.0)S(0.0)PGLGT(0.0)PLKS(0.99)PS(0.0)LAK K:TMT10,s:Phosphorylated S PDZD2 304146 4 7 85.1 628.64 HUMAN 1 -2.4715 -12.3871 GLGTRDNTLIRIMVS-p P08133;T273-p GLGTRDNTLIRIMVS 0.472379749153772 0.958467224330564 -0.130333333333333 -0.0166666666666667 6.00721302328953 0.265593800520871 -0.130333333333333 -0.0166666666666667 0.250771800238237 0.940677204685492 -1.28584843367646 -0.0779321819087518 P08133 ANXA6 P08133.T273.p_ANXA6 P08133_T273t _1_1_273_273 P08133 P08133|P08133-2 Annexin A6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9958.9958.3 9.7 5.9 3.418 2 1 1 0 508.9417 1444.8433 T273t TMT10 266 (K) GLGTRDNtLIR (I) GLGT(0.0)RDNT(0.99)LIR t:Phosphorylated T ANXA6 76214.3 1 3 1878.1 109.53 HUMAN 1 -6.0072 -0.2656 GLGTVSNSPASQRTP-p Q9UPP1;S804-p GLGTVSNSPASQRTP 0.176409109456939 0.133575259268703 0.312333333333333 -0.185666666666667 14.9635192481065 11.5254166280917 0.312333333333333 -0.185666666666667 0.0318895268202714 0.0703814706230408 2.87161197282415 -2.24735873694721 Q9UPP1 PHF8 Q9UPP1.S804.p_PHF8 Q9UPP1_S804s _1_1_804_804 Q9UPP1 Q9UPP1|Q9UPP1-2|Q9UPP1-3|Q9UPP1-4|Q9UPP1-5 Histone lysine demethylase PHF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6670.6670.2 23.47 18.07 2.159 10 1 1 0 1081.5001 2082.0261 S804s TMT10 790 (R) SSGSSSSGLGTVSNsPASQR (T) S(0.0)S(0.0)GS(0.0)S(0.0)S(0.0)S(0.0)GLGT(0.0)VS(0.0)NS(0.99)PAS(0.0)QR s:Phosphorylated S PHF8 118946 2 22 376.1 336.84 HUMAN 1 14.9635 -11.5254 GLHRAEQSLHDLQER-p G0XQ39;S257-p GLHRAEQSLHDLQER 0.234983357810473 0.466018977374709 0.283333333333333 0.119 12.0540283764333 4.4218918032034 0.283333333333333 0.119 0.0623156547280474 0.361252465419231 2.34192137050028 0.996781125216897 G0XQ39 STIM1 G0XQ39.S257.p_STIM1 G0XQ39_S257s _1_1_257_257 G0XQ39 G0XQ39|Q13586|Q13586-2|E9PNJ4 STIM1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7967.7967.3 11.97 11.97 99 1 1 1 0 545.5961 1554.8074 S257s TMT10 254 (R) AEQsLHDLQER (L) AEQS(1.0)LHDLQER s:Phosphorylated S STIM1 88986.4 2 1 771.1 227.77 HUMAN 1 12.054 4.4219 GLIDDYKTLHGNAPA-p Q8IXZ2;T23-p GLIDDYKTLHGNAPA 0.563005808318766 0.12785333160694 0.265 0.966 4.59531226516249 11.7773946979902 0.265 0.966 0.347111317092874 0.0664141364650141 1.0293458075193 2.29179311974701 Q8IXZ2 ZC3H3 Q8IXZ2.T23.p_ZC3H3 Q8IXZ2_Y21yT23t_2_2_21_23 Q8IXZ2 Q8IXZ2 Zinc finger CCCH domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29086.29086.5 12.31 4.13 12.31 9 2 2 0 1151.1851 5590.9613 Y21y T23t N27n TMT10 10 (R) QIRLLQGLIDDyKtLHGnAPAPGTPAASGWQPPTYHSGRAFSARYPR (P) QIRLLQGLIDDY(0.99)KT(0.99)LHGN(1.0)APAPGT(0.0)PAAS(0.0)GWQPPT(0.0)Y(0.0)HS(0.0)GRAFS(0.0)ARY(0.0)PR K:TMT10,y:Phosphorylated Y,t:Phosphorylated T,n:Deamidated ZC3H3 103422.9 1 6 2382.1 85.66 HUMAN 1 4.5953 11.7774 GLINKKCYEMASHLR-p P07737;Y129-p GLINKKCYEMASHLR 0.613534353016896 0.085377672800039 0.124666666666667 0.233 3.93579869171133 14.1447132916195 0.124666666666667 0.233 0.404036063200957 0.038506023437809 0.904837430234238 2.717876106562 P07737 PFN1 P07737.Y129.p_PFN1 P07737_Y129y _1_1_129_129 P07737 P07737|K7EJ44 Profilin-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.7615.7615.3 19.19 13.17 8.189 2 1 1 0 544.5845 1551.7722 Y129y TMT10 128 (K) CyEMASHLRR (S) CY(0.99)EMAS(0.0)HLRR C:Carbamidomethylation,y:Phosphorylated Y PFN1 15225.1 7 1 31.1 60.48 HUMAN 1 3.9358 14.1447 GLIPKFVSFLGRTDC-p P52292;S126-p GLIPKFVSFLGRTDC 0.539914690322165 0.00336103056796218 -0.099 -0.757 4.94196266947125 37.0046490885316 -0.099 -0.757 0.320482067031799 0.000199312754506507 -1.09341163836162 -8.86233991499321 P52292 KPNA2 P52292.S126.p_KPNA2 P52292_S126s _1_1_126_126 P52292 P52292 Importin subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26480.26480.2 9.24 5.33 99 1 1 1 0 567.7979 1054.6247 S126s TMT10 124 (K) FVsFLGR (T) FVS(1.0)FLGR s:Phosphorylated S KPNA2 58203.2 1 4 1475.1 139.39 HUMAN 1 -4.942 -37.0046 GLKDKEDSDSMTNTT-p Q8IVF2;S639-p GLKDKEDSDSMTNTT 0.238825148129725 0.216252885857927 -0.260666666666667 0.128333333333333 11.896628943778 8.75072129838211 -0.260666666666667 0.128333333333333 0.0646155589688528 0.133329997252703 -2.31401277803874 1.76459682427202 Q8IVF2 AHNAK2 Q8IVF2.S639.p_AHNAK2 Q8IVF2_S639s _1_1_639_639 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7910.7910.3 14.37 14.37 1.171 5 1 1 0 747.0325 2159.1105 S639s TMT10 635 (K) DKEDsDSMTNTTK (I) DKEDS(0.99)DS(0.0)MT(0.0)NT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S AHNAK2 617759.6 1 8 237.1 418.35 HUMAN 1 -11.8966 8.7507 GLKELFQTPICTDKP-p P46013;T2203-p GLKELFQTPICTDKP 0.48968485617666 0.0119943719830303 0.104666666666667 -0.616333333333333 5.71551355474119 26.8367405855718 0.104666666666667 -0.616333333333333 0.268193744881708 0.0020716955894048 1.23371427416945 -5.51696527582443 P46013 MKI67 P46013.T2203.p_MKI67 P46013_T2203t _1_1_2203_2203 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16557.16557.4 19.16 19.16 7.022 4 1 1 0 703.8689 2732.4896 T2203t TMT10 2199 (K) ELFQtPICTDKPTTHEK (T) ELFQT(0.99)PICT(0.0)DKPT(0.0)T(0.0)HEK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MKI67 360912.4 2 73 5.1 1918.46 HUMAN 1 5.7155 -26.8367 GLKGAGGSPVGVEEG-p Q7Z5J4;S1374-p GLKGAGGSPVGVEEG 0.355574265221002 0.885209339321534 0.149666666666667 -0.0146666666666667 8.34663302466267 0.744045562579508 0.149666666666667 -0.0146666666666667 0.146331120299422 0.842549535961664 1.69524518574017 -0.208362421854631 Q7Z5J4 RAI1 Q7Z5J4.S1374.p_RAI1 Q7Z5J4_S1374s _1_1_1374_1374 Q7Z5J4 Q7Z5J4 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24929.24929.5 21.69 20.84 10.778 4 1 1 0 724.3731 3537.8736 S1374s TMT10 1370 (K) GAGGsPVGVEEGLVNVGTGQKLPTSGADPLCR (N) GAGGS(0.99)PVGVEEGLVNVGT(0.0)GQKLPT(0.0)S(0.0)GADPLCR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RAI1 206315.3 9 21 142.1 522.21 HUMAN 1 8.3466 -0.744 GLKGQRASLEAAIAD-p P05787;S330-p GLKGQRASLEAAIAD 0.121347188474092 0.0746034417874537 -0.796666666666667 0.567333333333333 19.0521193752967 14.9640638995407 -0.796666666666667 0.567333333333333 0.0124390743158357 0.0318855277854738 -3.67841311785246 2.86984684686397 P05787 KRT8 P05787.S330.p_KRT8 P05787_S330s _1_1_330_330 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.29048.29048.4 22.02 22.02 99 1 1 1 0 624.3391 2414.3655 S330s TMT10 329 (R) AsLEAAIADAEQRGELAIK (D) AS(1.0)LEAAIADAEQRGELAIK K:TMT10,s:Phosphorylated S KRT8 53703.3 10 26 69.1 672.47 HUMAN 1 -19.0521 14.9641 GLKGSSPTPPCSPVQ-p Q9NUL3;T488-p GLKGSSPTPPCSPVQ 0.303423649713577 0.180561792028915 0.230333333333333 -0.188666666666667 9.7024891886856 9.77857738971605 0.230333333333333 -0.188666666666667 0.107090533254807 0.105230651944439 1.93006584218725 -1.94250019052007 Q9NUL3 STAU2 Q9NUL3.T488.p_STAU2 Q9NUL3_T488t _1_1_488_488 Q9NUL3 Q9NUL3|A0A0A0MTC5|Q9NUL3-2|E9PH62|E7EVJ4|Q9NUL3-7|A0A0A0MTC6|E7EPX0|Q9NUL3-3|F8VPI7|Q9NUL3-8|A0A0A0MTD1|Q9NUL3-6|A0A0A0MTC4|Q9NUL3-4|G5EA18 Double-stranded RNA-binding protein Staufen homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11713.11713.3 8.92 8.92 1.2 5 1 1 0 688.68 1984.0574 T488t TMT10 484 (K) GSSPtPPCSPVQPSK (Q) GS(0.0)S(0.0)PT(0.99)PPCS(0.0)PVQPS(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T STAU2 62867.6 1 9 1170.1 170.28 HUMAN 1 9.7025 -9.7786 GLKMENGSLKSHLQG-p Q5M775;S553-p GLKMENGSLKSHLQG 0.0771358272620703 0.0122060462402088 -0.497333333333333 -0.589 23.8294406344363 26.7164553895178 -0.497333333333334 -0.589 0.00414053000865807 0.00212987669255791 -4.75328935794681 -5.48458920379864 Q5M775 SPECC1 Q5M775.S553.p_SPECC1 Q5M775_S553s _1_1_553_553 Q5M775 Q5M775|Q5M775-4|Q5M775-2|Q5M775-3|Q5M775-5 Cytospin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10711.10711.2 7.95 7.95 99 1 1 1 0 658.8385 1236.7022 S553s TMT10 549 (K) MENGsLK (S) MENGS(1.0)LK K:TMT10,s:Phosphorylated S SPECC1 119267.5 1 16 330.1 358.68 HUMAN 1 -23.8294 -26.7165 GLKQQKASAELIEEE-p P12081;S27-p GLKQQKASAELIEEE 0.481005429235313 0.127367580208881 -0.101666666666667 0.252666666666667 5.85011895930056 11.7970587712087 -0.101666666666667 0.252666666666667 0.260008834215288 0.0661141049542377 -1.25781713839167 2.29526685703237 P12081 HARS P12081.S27.p_HARS P12081_S27s _1_1_27_27 P12081 P12081|P12081-4|P12081-2|P12081-3|B4DDD8 Histidine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17857.17857.3 16.4 16.4 99 1 1 1 0 814.1166 2360.364 S27s TMT10 23 (K) QQKAsAELIEEEVAK (L) QQKAS(1.0)AELIEEEVAK K:TMT10,s:Phosphorylated S HARS 57980 3 1 2178.1 94.48 HUMAN 1 -5.8501 11.7971 GLKSTTNYVDFYSTK-p A0A0D9SF60;Y1166-p GLKSTTNYVDFYSTK 0.866350674764986 0.100668219533403 0.0303333333333333 -0.256 1.21290713480838 13.1737211707999 0.0303333333333333 -0.256 0.756326446262043 0.04815350265583 0.326463108470484 -2.54100169821283 A0A0D9SF60 NotFound A0A0D9SF60.Y1166.p_NotFound A0A0D9SF60_Y1166y _1_1_1166_1166 A0A0D9SF60 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.20531.20581.2 19.66 19.66 3.294 7 1 1 0 982.4736 1883.9791 Y1166y TMT10 1162 (K) STTNyVDFYSTK (R) S(0.0)T(0.0)T(0.0)NY(0.99)VDFY(0.0)S(0.0)T(0.0)K K:TMT10,y:Phosphorylated Y PKP4 134765 3 3 23.1 71.28 HUMAN 1 1.2129 -13.1737 GLLDQDLSNIGPAYD-p Q9UBL3;S262-p GLLDQDLSNIGPAYD 0.142182032765393 0.0211656247596102 0.273666666666667 0.388 17.3143067761551 22.9005037894605 0.273666666666667 0.388 0.0185596303588981 0.00512801894592959 3.32479887978558 4.52590527616333 Q9UBL3 ASH2L Q9UBL3.S262.p_ASH2L Q9UBL3_S262s _1_1_262_262 Q9UBL3 Q9UBL3 Set1/Ash2 histone methyltransferase complex subunit ASH2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30671.30671.3 7.14 7.14 7.144 2 1 1 0 882.784 2566.3553 S262s TMT10 254 (K) FGLLDQDLsNIGPAYDNQK (Q) FGLLDQDLS(0.99)NIGPAY(0.0)DNQK K:TMT10,s:Phosphorylated S ASH2L 69349.2 1 1 3331.1 53.66 HUMAN 1 17.3143 22.9005 GLLMPSMSESDLTTS-p Q16825;S797-p GLLMPSMSESDLTTS 0.357290119673935 0.120214523930244 0.125666666666667 0.180333333333333 8.30671094471382 12.1317478283563 0.125666666666667 0.180333333333333 0.147682455778843 0.0612103999453382 1.68832927993663 2.35453495438754 Q16825 PTPN21 Q16825.S797.p_PTPN21 Q16825_S797s _1_1_797_797 Q16825 Q16825 Tyrosine-protein phosphatase non-receptor type 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24884.24884.3 18 18 1.688 6 1 1 0 736.0043 2126.0307 S797s TMT10 789 (R) DGLLMPSMsESDLTTSGR (Y) DGLLMPS(0.0)MS(0.99)ES(0.0)DLT(0.0)T(0.0)S(0.0)GR s:Phosphorylated S PTPN21 134191.5 3 11 762.1 229.75 HUMAN 1 8.3067 12.1317 GLLNELYSCTEEEEA-p Q9Y2I9;S91-p GLLNELYSCTEEEEA 0.51428507339171 0.256200023681851 0.153333333333333 -0.276333333333333 5.33124766021951 7.78976258297664 0.153333333333333 -0.276333333333333 0.293005136633002 0.166350358711733 1.16442938623303 -1.59817495455165 Q9Y2I9 TBC1D30 Q9Y2I9.S91.p_TBC1D30 Q9Y2I9_S91s _1_1_91_91 Q9Y2I9 Q9Y2I9 TBC1 domain family member 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37070.37070.3 32.88 32.88 2.374 6 1 1 0 1008.1343 2942.4251 S91s TMT10 78 (R) TASLVSGLLNELYsCTEEEEAAGGGR (G) T(0.0)AS(0.0)LVS(0.0)GLLNELY(0.0)S(0.99)CT(0.0)EEEEAAGGGR C:Carbamidomethylation,s:Phosphorylated S TBC1D30 103654.4 2 5 283.1 386.67 HUMAN 1 5.3312 -7.7898 GLLRALASPEQLAQL-p Q9Y3Q8;S370-p GLLRALASPEQLAQL 0.198300279868763 0.947244161865194 -0.197333333333333 0.00700000000000002 13.6940903443284 0.336126618563284 -0.197333333333333 0.00700000000000003 0.042716038135854 0.925523260737901 -2.63692267768689 0.0979075947857791 Q9Y3Q8 TSC22D4 Q9Y3Q8.S370.p_TSC22D4 Q9Y3Q8_S370s _1_1_370_370 Q9Y3Q8 Q9Y3Q8 TSC22 domain family protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24132.24132.3 12.32 12.32 12.317 3 1 1 0 710.7101 2050.1494 S370s TMT10 367 (R) ALAsPEQLAQLPSSGVPR (L) ALAS(0.99)PEQLAQLPS(0.0)S(0.0)GVPR s:Phosphorylated S TSC22D4 41082.3 1 9 648.1 254.5 HUMAN 1 -13.6941 0.3361 GLLRRKVSIIETKEK-p Q9HC62;S344-p GLLRRKVSIIETKEK 0.219716131376416 0.0668759099714224 0.19 0.335333333333333 12.666587438483 15.6242676115327 0.19 0.335333333333333 0.0541179399172419 0.0273888147666889 2.45115773956623 2.99431918917317 Q9HC62 SENP2 Q9HC62.S344.p_SENP2 Q9HC62_S344s _1_1_344_344 Q9HC62 Q9HC62|Q9HC62-2 Sentrin-specific protease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12129.12129.2 9.17 9.17 3.343 2 1 1 0 728.4333 1375.8925 S344s Hydrogen 342 (R) KVsIIETK (E) KVS(0.99)IIET(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S SENP2 68652.1 2 6 1030.1 186.01 HUMAN 1 12.6666 15.6243 GLLTPPASPLELLEA-p Q9Y5W3;S248-p GLLTPPASPLELLEA 0.59955563859167 0.522504761726917 -0.076 -0.0703333333333333 4.10392970278893 3.78733918468007 -0.076 -0.0703333333333334 0.388693277682183 0.418086439457465 -0.936944438588068 -0.876111912729699 Q9Y5W3 KLF2 Q9Y5W3.S248.p_KLF2 Q9Y5W3_T244tS248s_2_2_244_248 Q9Y5W3 Q9Y5W3 Krueppel-like factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.35755.35755.4 12.54 12.54 99 2 2 2 0 681.1345 2561.5885 T244t S248s TMT10 241 (R) GLLtPPAsPLELLEAKPK (R) GLLT(1.0)PPAS(1.0)PLELLEAKPK K:TMT10,t:Phosphorylated T,s:Phosphorylated S KLF2 37932.4 2 1 6292.1 12.54 HUMAN 1 -4.1039 -3.7873 GLMALGNSRHGHHGP-p Q8TCJ2;S29-p GLMALGNSRHGHHGP 0.560899556742354 0.714460681798457 -0.113333333333333 -0.0413333333333333 4.62406723835911 2.00935798475326 -0.113333333333333 -0.0413333333333333 0.344820657927411 0.629599249303688 -1.03469281534049 -0.510814027199983 Q8TCJ2 STT3B Q8TCJ2.S29.p_STT3B Q8TCJ2_S29s _1_1_29_29 Q8TCJ2 Q8TCJ2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28441.28441.3 15.86 15.86 3.408 6 1 1 0 725.015 2093.0647 S29s TMT10 13 (K) SSLNSSPWSGLMALGNsR (H) S(0.0)S(0.0)LNS(0.0)S(0.0)PWS(0.0)GLMALGNS(0.99)R s:Phosphorylated S STT3B 94300.1 5 4 3653.1 46.06 HUMAN 1 -4.6241 -2.0094 GLNKNRRSLPVSICR-p O94885;S813-p GLNKNRRSLPVSICR 0.241925315986191 0.156709118944541 -0.291333333333333 0.172666666666667 11.7855281905824 10.5850422131101 -0.291333333333333 0.172666666666667 0.0662898720776077 0.0873968497638601 -2.2943500656664 2.08266300648951 O94885 SASH1 O94885.S813.p_SASH1 O94885_S813s _1_1_813_813 O94885 O94885|A0A087WW74 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17102.17102.2 13.55 6.56 2.819 2 1 1 0 620.8204 1160.6659 S813s TMT10 813 (R) sLPVSICR (S) S(0.99)LPVS(0.0)ICR C:Carbamidomethylation,s:Phosphorylated S SASH1 137734.8 3 16 295.1 379.69 HUMAN 1 -11.7855 10.585 GLNPFALSPLQVKGG-p Q9UIF8;S1618-p GLNPFALSPLQVKGG 0.5483118247722 0.0756913799364791 0.0853333333333333 -0.230666666666667 4.81624045716934 14.8788334710322 0.0853333333333333 -0.230666666666667 0.329895167875385 0.0325174628608878 1.07027307277656 -2.8539131589927 Q9UIF8 BAZ2B Q9UIF8.S1618.p_BAZ2B Q9UIF8_S1618s _1_1_1618_1618 Q9UIF8 Q9UIF8|Q9UIF8-3|Q9UIF8-5|Q9UIF8-2|Q9UIF8-4 Bromodomain adjacent to zinc finger domain protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.33841.33841.5 16.8 16.8 1.349 6 1 1 0 702.7822 3429.9146 S1618s TMT10 1594 (K) SPSPTPAPLGSSAQNPVGLNPFALsPLQVK (G) S(0.0)PS(0.0)PT(0.0)PAPLGS(0.0)S(0.0)AQNPVGLNPFALS(0.99)PLQVK K:TMT10,s:Phosphorylated S BAZ2B 242223.6 3 6 1765.1 116.68 HUMAN 1 4.8162 -14.8788 GLNTSQESDDDILDE-p Q5VV41;S230-p GLNTSQESDDDILDE 0.148374825932688 0.147144465082663 0.255333333333333 -0.183666666666667 16.7202955575729 10.957025445455 0.255333333333333 -0.183666666666667 0.0212799422116106 0.0802227333998039 3.20774577656093 -2.14761837723158 Q5VV41 ARHGEF16 Q5VV41.S230.p_ARHGEF16 Q5VV41_S230s _1_1_230_230 Q5VV41 Q5VV41 Rho guanine nucleotide exchange factor 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23739.23739.4 25.02 25.02 3.684 8 1 1 0 1037.0232 4065.0966 S230s TMT10 223 (R) GLNTSQEsDDDILDESSSPEGTQKVDATIVVK (S) GLNT(0.0)S(0.0)QES(0.99)DDDILDES(0.0)S(0.0)S(0.0)PEGT(0.0)QKVDAT(0.0)IVVK K:TMT10,s:Phosphorylated S ARHGEF16 80388.8 5 10 597.1 263.65 HUMAN 1 16.7203 -10.957 GLPAADVSPATAEEP-p O43149;S1509-p GLPAADVSPATAEEP 0.459299895698651 0.149195372803358 0.099 0.154666666666667 6.23016590369515 10.8755947998662 0.099 0.154666666666667 0.238222846473616 0.0817411079510677 1.32546397543184 2.13337925988425 O43149 ZZEF1 O43149.S1509.p_ZZEF1 O43149_S1509s _1_1_1509_1509 O43149 O43149 Zinc finger ZZ-type and EF-hand domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23213.23237.3 15.34 15.34 1.212 9 1 1 0 1015.5119 2964.5363 S1509s TMT10 1497 (K) LPSSSGLPAADVsPATAEEPLSPSTPTR (R) LPS(0.0)S(0.0)S(0.0)GLPAADVS(0.99)PAT(0.0)AEEPLS(0.0)PS(0.0)T(0.0)PT(0.0)R s:Phosphorylated S ZZEF1 335976 1 5 1481.1 138.54 HUMAN 1 6.2302 10.8756 GLPAEQGSPRMAETV-p A0A087WUZ3;S2140-p GLPAEQGSPRMAETV 0.468945671363706 0.787846136681546 -0.136666666666667 -0.0303333333333333 6.06993613347164 1.43810513060299 -0.136666666666667 -0.0303333333333333 0.247176049399304 0.718107540288786 -1.29701256000711 -0.380388668042585 A0A087WUZ3 NotFound A0A087WUZ3.S2140.p_NotFound A0A087WUZ3_S2140s _1_1_2140_2140 A0A087WUZ3 A0A087WUZ3|Q01082|Q01082-2|Q01082-3 Spectrin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15191.15191.4 31.49 31.49 4.764 6 1 1 0 1006.9799 3944.9263 S2140s TMT10 2111 (K) VSEEAESQQQWDTSKGEQVSQNGLPAEQGsPR (M) VS(0.0)EEAES(0.0)QQQWDT(0.0)S(0.0)KGEQVS(0.0)QNGLPAEQGS(0.99)PR K:TMT10,s:Phosphorylated S SPTBN1 275623.3 7 13 233.1 420.49 HUMAN 1 -6.0699 -1.4381 GLPAGPNSDTSLDAK-p Q9NRM7;S43-p GLPAGPNSDTSLDAK 0.132087959934017 0.473260768095312 -0.263666666666667 -0.0726666666666667 18.1463391323834 4.33236560716059 -0.263666666666667 -0.0726666666666667 0.015323786297272 0.368776670765185 -3.49194224678846 -0.979975677970566 Q9NRM7 LATS2 Q9NRM7.S43.p_LATS2 Q9NRM7_S43s _1_1_43_43 Q9NRM7 Q9NRM7 Serine/threonine-protein kinase LATS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17298.17298.3 16.14 14.85 1.208 5 1 1 0 794.738 2302.2291 S43s TMT10 32 (K) SSVQGLPAGPNsDTSLDAK (V) S(0.0)S(0.0)VQGLPAGPNS(0.99)DT(0.0)S(0.0)LDAK K:TMT10,s:Phosphorylated S LATS2 121046.5 1 12 824.2 217.64 HUMAN 1 -18.1463 -4.3324 GLPARPKSPLDPKKD-p Q8IYH5-2;S605-p GLPARPKSPLDPKKD 0.233493203593579 0.0331108814953639 -0.376 0.301 12.1331301516965 19.9548326949718 -0.376 0.301 0.0611909202826382 0.0101045442592494 -2.35597062642984 3.86565684746106 Q8IYH5 ZZZ3 Q8IYH5.2.S605.p_ZZZ3 Q8IYH5-2_S605s _1_1_605_605 Q8IYH5-2 Q8IYH5-2 Isoform 2 of ZZ-type zinc finger-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11767.11767.5 10.01 10.01 99 1 1 1 0 500.9095 2420.5523 S605s TMT10 598 (K) GLPARPKsPLDPKK (D) GLPARPKS(1.0)PLDPKK K:TMT10,s:Phosphorylated S ZZZ3 103291.5 5 14 1027.2 186.83 HUMAN 1 -12.1331 19.9548 GLPEAEDSPCRAPVL-p Q7Z5J4;S1013-p GLPEAEDSPCRAPVL 0.715158508515525 0.0109657352056547 -0.051 -0.441333333333333 2.74506150796695 27.4597399642834 -0.051 -0.438694223665995 0.531488472124138 0.00179484109050897 -0.668138051057206 -5.68693721863654 Q7Z5J4 RAI1 Q7Z5J4.S1013.p_RAI1 Q7Z5J4_S1013s _1_1_1013_1013 Q7Z5J4 Q7Z5J4|Q7Z5J4-2|A0A1W2PQJ7 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17430.17430.3 18.18 13.32 99 1 1 1 0 792.0799 2294.2579 S1013s TMT10 1006 (R) GLPEAEDsPCRAPVLPK (D) GLPEAEDS(1.0)PCRAPVLPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RAI1 206315.3 1 9 142.1 522.21 HUMAN 1 -2.7451 -27.4597 GLPERSVSLTGAPES-p A0A087WTP3;S193-p GLPERSVSLTGAPES 0.431075862401623 0.0213404996074559 0.110666666666667 0.350666666666667 6.72847828495494 22.8455469579258 0.110666666666667 0.350666666666667 0.212398855138882 0.00519332263791375 1.41339595297575 4.51299881326544 A0A087WTP3 NotFound A0A087WTP3.S193.p_NotFound A0A087WTP3_S193s _1_1_193_193 A0A087WTP3 Q92945|A0A087WTP3 Far upstream element-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16255.16255.2 14.44 9.25 2.39 4 1 1 0 920.9952 1761.0158 S193s TMT10 191 (R) SVsLTGAPESVQK (A) S(0.0)VS(0.99)LT(0.0)GAPES(0.0)VQK K:TMT10,s:Phosphorylated S KHSRP 73482.9 3 6 970.1 193.49 HUMAN 1 6.7285 22.8455 GLPMVRGSPRVRDDA-p Q5VV41;S41-p GLPMVRGSPRVRDDA 0.970022980382972 0.883686579558172 -0.00633333333333335 -0.0163333333333333 0.259814761448781 0.755322276371631 -0.00633333333333335 -0.0163333333333333 0.941929771563625 0.840364643950384 -0.076289864277253 -0.211304700153535 Q5VV41 ARHGEF16 Q5VV41.S41.p_ARHGEF16 Q5VV41_S41s _1_1_41_41 Q5VV41 Q5VV41 Rho guanine nucleotide exchange factor 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17977.17977.3 11.26 9.65 2.282 2 1 1 0 721.0306 2081.1123 S41s TMT10 25 (R) LDAGGNPASGLPMVRGsPR (V) LDAGGNPAS(0.0)GLPMVRGS(0.99)PR s:Phosphorylated S ARHGEF16 80388.8 1 3 597.1 263.65 HUMAN 1 -0.2598 -0.7553 GLPQIPAS_______-p Q9NZZ3;S219-p GLPQIPAS_______ 0.530635019877545 0.0330896533503245 -0.105 -0.288 5.0930795131313 19.9588026042729 -0.105 -0.288 0.309522374693884 0.0100953118611357 -1.12108837719846 -3.86650599913147 Q9NZZ3 CHMP5 Q9NZZ3.S219.p_CHMP5 Q9NZZ3_S219s _1_1_219_219 Q9NZZ3 Q9NZZ3 Charged multivesicular body protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30388.30388.3 18.74 18.74 99 1 1 1 0 813.0983 2357.3117 S219s TMT10 202 (K) NKDGVLVDEFGLPQIPAs (-) NKDGVLVDEFGLPQIPAS(1.0) K:TMT10,s:Phosphorylated S CHMP5 24627.4 1 4 2366.1 86.45 HUMAN 1 -5.0931 -19.9588 GLPQRPASAGAMLGG-p Q14814;S201-p GLPQRPASAGAMLGG 0.197649293626488 0.0151762863813809 0.208666666666667 0.367 13.7254188225571 25.1589288536321 0.208666666666667 0.367 0.0424090083768871 0.00304864681688483 2.64264186551184 5.07775126155575 Q14814 MEF2D Q14814.S201.p_MEF2D Q14814_S201s _1_1_201_201 Q14814 Q14814|Q14814-2|Q14814-4|Q14814-5|Q14814-3|Q14814-6 Myocyte-specific enhancer factor 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21578.21578.4 32.55 32.55 4.745 7 1 1 0 1066.5113 4183.061 S201s TMT10 189 (R) NSVSPGLPQRPAsAGAMLGGDLNSANGACPSPVGNGYVSAR (A) NS(0.0)VS(0.0)PGLPQRPAS(0.99)AGAMLGGDLNS(0.0)ANGACPS(0.0)PVGNGY(0.0)VS(0.0)AR C:Carbamidomethylation,s:Phosphorylated S MEF2D 56165 6 5 1187.1 168.72 HUMAN 1 13.7254 25.1589 GLPVPKKSPKSQPLE-p Q96QZ7;S730-p GLPVPKKSPKSQPLE 0.909891750490786 0.046793122201649 0.0166666666666667 0.436 0.804626100197535 17.7894326723885 0.0166666666666667 0.436 0.830878248931593 0.016636299595018 0.224126421888001 3.41701896654685 Q96QZ7 MAGI1 Q96QZ7.S730.p_MAGI1 Q96QZ7_S730s _1_1_730_730 Q96QZ7 Q96QZ7|Q96QZ7-2|Q96QZ7-6|Q96QZ7-7|Q96QZ7-5|Q96QZ7-3|Q96QZ7-4|A0A087WT53|A0A087WXD2 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13216.13216.4 9.13 9.13 99 1 1 1 0 526.832 2024.3402 S730s TMT10 722 (R) GGLPVPKKsPK (S) GGLPVPKKS(1.0)PK K:TMT10,s:Phosphorylated S MAGI1 165548 1 4 1223.1 164.72 HUMAN 1 0.8046 17.7894 GLPVTMHSPNMRLLR-p Q9H0K1;S379-p GLPVTMHSPNMRLLR 0.788195837750741 0.4327885548442 0.056 0.105666666666667 1.99226619237805 4.84647298319495 0.056 0.105666666666667 0.632081938581644 0.327606644625168 0.507088651376899 1.0756351471207 Q9H0K1 SIK2 Q9H0K1.S379.p_SIK2 Q9H0K1_S379s _1_1_379_379 Q9H0K1 Q9H0K1 Serine/threonine-protein kinase SIK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17003.17003.3 15.18 15.18 1.751 3 1 1 0 683.3385 1968.0357 S379s TMT10 368 (K) AQTVGLPVTMHsPNMR (L) AQT(0.0)VGLPVT(0.0)MHS(0.99)PNMR s:Phosphorylated S SIK2 104769.2 1 1 1626.1 126.2 HUMAN 1 1.9923 4.8465 GLPYIDDSPSSSPHL-p P11274;S459-p GLPYIDDSPSSSPHL 0.990744188215354 0.625874088999813 -0.00200000000000001 0.0703333333333334 0.0832442166361217 2.76966678118607 -0.00200000000000002 0.0703333333333334 0.98101484282509 0.528485799068051 -0.0249162111478797 0.673137335238226 P11274 BCR P11274.S459.p_BCR P11274_S459s _1_1_459_459 P11274 P11274 Breakpoint cluster region protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15609.15609.4 19.94 19.94 1.606 7 1 1 0 702.0944 2725.3833 S459s TMT10 449 (R) HQDGLPYIDDsPSSSPHLSSK (G) HQDGLPY(0.0)IDDS(0.99)PS(0.0)S(0.0)S(0.0)PHLS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S BCR 143843.8 1 7 642.1 254.93 HUMAN 1 -0.0832 2.7697 GLQDGLRSSSNSRSG-p P36915;S32-p GLQDGLRSSSNSRSG 0.993911734338014 0.211771146947193 -0.00133333333333334 0.139 0.0531685169774195 8.86947866575241 -0.00133333333333333 0.139 0.98783213110284 0.129733499586625 -0.015968015925351 1.78513721527272 P36915 GNL1 P36915.S32.p_GNL1 P36915_S32s _1_1_32_32 P36915 P36915 Guanine nucleotide-binding protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6167.6167.2 10.34 4.29 1.166 4 1 1 0 843.4116 1605.8506 S32s TMT10 25 (R) GLQDGLRsSSNSR (S) GLQDGLRS(0.99)S(0.0)S(0.0)NS(0.0)R s:Phosphorylated S GNL1 69173.1 3 1 1812.1 113.26 HUMAN 1 -0.0532 8.8695 GLQEHSISVDLDSSL-p Q86TI0-2;S527-p GLQEHSISVDLDSSL 0.326502819643871 0.0146076759554989 0.266666666666667 -0.445333333333333 9.09914029966837 25.4197428982591 0.266666666666667 -0.445333333333333 0.123051233070207 0.00287095053687414 1.82552604009481 -5.14431461928205 Q86TI0 TBC1D1 Q86TI0.2.S527.p_TBC1D1 Q86TI0-2_S527s _1_1_527_527 Q86TI0-2 Q86TI0|Q86TI0-2 Isoform 2 of TBC1 domain family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24319.24319.4 19.78 19.78 1.557 11 1 1 0 1026.2659 4022.0843 S527s TMT10 520 (R) GLQEHSIsVDLDSSLSSTLSNTSKEPSVCEK (E) GLQEHS(0.0)IS(0.99)VDLDS(0.0)S(0.0)LS(0.0)S(0.0)T(0.0)LS(0.0)NT(0.0)S(0.0)KEPS(0.0)VCEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TBC1D1 132688.3 1 6 587.1 264.9 HUMAN 1 9.0991 -25.4197 GLQGILITCNMNERK-p Q9NXG2;T49-p GLQGILITCNMNERK 0.0635370415880919 0.923917507104541 -1.10733333333333 -0.015 25.8687902463511 0.484927904878256 -1.10733333333333 -0.0149999999999999 0.00258893397799931 0.894349378469834 -5.26723375610385 -0.139156299869965 Q9NXG2 THUMPD1 Q9NXG2.T49.p_THUMPD1 Q9NXG2_T49t _1_1_49_49 Q9NXG2 Q9NXG2|H3BNW0 THUMP domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14308.14308.3 7.62 1.82 99 1 1 1 0 918.1491 2672.4628 T49t TMT10 38 (R) QLEPGLQGILItCNMNERK (C) Q(0.0)LEPGLQGILIT(1.0)CN(0.0)M(0.0)N(0.0)ERK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T THUMPD1 39714.1 1 1 1805.1 113.76 HUMAN 1 -25.8688 -0.4849 GLQLGAQSPGRGTTL-p Q8N1G0;S1057-p GLQLGAQSPGRGTTL 0.691390193706361 0.0450606415184352 -0.0843333333333333 0.241 3.00492492846796 18.0169143149712 -0.0843333333333333 0.241 0.500619206087066 0.0157873256906247 -0.721412429587846 3.46285092152343 Q8N1G0 ZNF687 Q8N1G0.S1057.p_ZNF687 Q8N1G0_S1057s _1_1_1057_1057 Q8N1G0 Q8N1G0 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9584.9584.3 14.72 14.72 2.721 3 1 1 0 710.3773 2049.1515 S1057s TMT10 1049 (R) HGLQLGAQsPGRGTTLAR (G) HGLQLGAQS(0.99)PGRGT(0.0)T(0.0)LAR s:Phosphorylated S ZNF687 131979.7 5 16 156.1 501.88 HUMAN 1 -3.0049 18.0169 GLQPGNISPTSKLVS-p P24723;S317-p GLQPGNISPTSKLVS 0.668622007017775 0.991443213465625 0.063 -0.00133333333333332 3.26926638755258 0.0550700631910303 0.063 -0.0013333333333333 0.471056890846286 0.987399706248528 0.774592266534222 -0.0165340433637239 P24723 PRKCH P24723.S317.p_PRKCH P24723_S317s _1_1_317_317 P24723 P24723|P24723-2 Protein kinase C eta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22334.22334.3 13.76 13.76 2.795 4 1 1 0 737.3928 2130.1993 S317s TMT10 305 (K) TLAGMGLQPGNIsPTSK (L) T(0.0)LAGMGLQPGNIS(0.99)PT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S PRKCH 79196.4 6 2 1569.1 130.79 HUMAN 1 3.2693 -0.0551 GLQPTRWSLRHSLFK-p P24723;S28-p GLQPTRWSLRHSLFK 0.301639765350884 0.445988016830919 -0.176666666666667 0.101333333333333 9.76181555222864 4.67161525337483 -0.176666666666667 0.101333333333333 0.105637580284491 0.341066036759123 -1.94035780758516 1.04332165709912 P24723 PRKCH P24723.S28.p_PRKCH P24723_S28s _1_1_28_28 P24723 P24723 Protein kinase C eta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22524.22524.3 9.05 9.05 1.167 2 1 1 0 664.6929 1912.0966 S28s TMT10 16 (R) IGEAVGLQPTRWsLR (H) IGEAVGLQPT(0.0)RWS(0.99)LR s:Phosphorylated S PRKCH 79196.4 2 1 1569.1 130.79 HUMAN 1 -9.7618 4.6716 GLQVDLQSDGAAAED-p P33991;S131-p GLQVDLQSDGAAAED 0.642910629713767 0.024488748385605 0.0683333333333333 -0.325 3.58604429222606 21.9342349421833 0.0683333333333333 -0.325 0.437920797312981 0.00640584617703604 0.837125570671053 -4.30237460105492 P33991 MCM4 P33991.S131.p_MCM4 P33991_S131s _1_1_131_131 P33991 P33991 DNA replication licensing factor MCM4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29002.29207.3 20.08 20.08 6.413 3 1 1 0 1056.5341 3087.621 S131s TMT10 124 (K) GLQVDLQsDGAAAEDIVASEQSLGQK (L) GLQVDLQS(0.99)DGAAAEDIVAS(0.0)EQS(0.0)LGQK K:TMT10,s:Phosphorylated S MCM4 97126.8 4 6 1487.1 137.87 HUMAN 1 3.586 -21.9342 GLQVKAASVPVKGSL-p E7ETY2;S728-p GLQVKAASVPVKGSL 0.588586350860677 0.872475270875945 0.082 0.0226666666666667 4.23938688558965 0.836004061959076 0.082 0.0226666666666667 0.376756983825308 0.824896752408507 0.962620879696585 0.232197897500972 E7ETY2 TCOF1 E7ETY2.S728.p_TCOF1 E7ETY2_S728s _1_1_728_728 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2|Q13428-5 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11242.11242.2 8.75 3.19 99 1 1 1 0 605.3547 1129.7345 S728s TMT10 726 (K) AAsVPVK (G) AAS(1.0)VPVK K:TMT10,s:Phosphorylated S TCOF1 152529.5 1 17 19.1 1034.65 HUMAN 1 4.2394 0.836 GLRCAGPTPEAELQA-p Q15050;T56-p GLRCAGPTPEAELQA 0.729757185802638 0.334855250336672 0.0606666666666667 0.096 2.59756146957932 6.29766793382331 0.0606666666666667 0.0960000000000001 0.549849523514651 0.234548795284598 0.637416231434183 1.33708921190913 Q15050 RRS1 Q15050.T56.p_RRS1 Q15050_T56t _1_1_56_56 Q15050 Q15050 Ribosome biogenesis regulatory protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22232.22232.3 15.52 15.52 99 1 1 1 0 631.6441 1812.9475 T56t TMT10 52 (R) CAGPtPEAELQALAR (D) CAGPT(1.0)PEAELQALAR C:Carbamidomethylation,t:Phosphorylated T RRS1 41249.7 1 2 4908.1 25.18 HUMAN 1 2.5976 6.2977 GLRDGSGTPSRHSLS-p Q9UQ35;T1453-p GLRDGSGTPSRHSLS 0.229401753870038 0.0304372061862748 0.224 0.400333333333333 12.2876671337227 20.5019029371612 0.224 0.400333333333333 0.0590518199112814 0.00890860506504934 2.38346509754368 3.98365403758684 Q9UQ35 SRRM2 Q9UQ35.T1453.p_SRRM2 Q9UQ35_T1453t _1_1_1453_1453 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4345.4345.3 13.14 6.81 1.662 6 1 1 0 609.6255 1746.8932 T1453t TMT10 1441 (R) SGSSPGLRDGSGtPSR (H) S(0.0)GS(0.0)S(0.0)PGLRDGS(0.0)GT(0.99)PS(0.0)R t:Phosphorylated T SRRM2 300351.7 1 89 2.1 3310.34 HUMAN 1 12.2877 20.5019 GLRDSHSSEEDEASS-p Q5JTV8;S157-p GLRDSHSSEEDEASS 0.268803950310253 0.0371678109930036 0.202666666666667 0.292333333333333 10.8193182816442 19.2210839540736 0.202666666666667 0.292333333333333 0.0828072137197037 0.0119644187453029 2.12448462362265 3.71044395241541 Q5JTV8 TOR1AIP1 Q5JTV8.S157.p_TOR1AIP1 Q5JTV8_S157s _1_1_157_157 Q5JTV8 Q5JTV8|A0A0A0MSK5|Q5JTV8-2|J3KN66|Q5JTV8-3 Torsin-1A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12146.12146.3 22.76 22.76 1.342 9 1 1 0 1016.4724 2967.4431 S157s Hydrogen 153 (R) DSHSsEEDEASSQTDLSQTISKK (T) DS(0.0)HS(0.0)S(0.99)EEDEAS(0.0)S(0.0)QT(0.0)DLS(0.0)QT(0.0)IS(0.0)KK K:TMT10-Lys-Only,s:Phosphorylated S TOR1AIP1 66418.4 22 6 585.1 265.22 HUMAN 1 10.8193 19.2211 GLRKKNLSPGAVESD-p P53621-2;S173-p GLRKKNLSPGAVESD 0.841107925615949 0.176719120218072 -0.0333333333333333 -0.151 1.45181171694119 9.9000015762545 -0.0333333333333333 -0.151 0.715844723810877 0.102329262088071 -0.383662530452727 -1.96355732434542 P53621 COPA P53621.2.S173.p_COPA P53621-2_S173s _1_1_173_173 P53621-2 P53621-2 Isoform 2 of Coatomer subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.35375.35375.5 20.68 14.66 3.162 5 1 1 0 671.9572 3275.7887 S173s TMT10 171 (K) NLsPGAVESDVRGITGVDLFGTTDAVVK (H) NLS(0.99)PGAVES(0.0)DVRGIT(0.0)GVDLFGT(0.0)T(0.0)DAVVK K:TMT10,s:Phosphorylated S COPA 140918.9 6 1 545.1 275.81 HUMAN 1 -1.4518 -9.9 GLRKRGRSGSAAQAE-p Q92685;S11-p GLRKRGRSGSAAQAE 0.350493225948053 0.00188708706215948 -0.138 -0.944 8.45949093737212 42.7757448723709 -0.138 -0.944 0.142577470741851 5.27746683495432e-05 -1.71479186313818 -11.4531647194407 Q92685 ALG3 Q92685.S11.p_ALG3 Q92685_S11s _1_1_11_11 Q92685 Q92685|F8WE30|F8WF93 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10549.10549.2 13.42 13.42 2.162 2 1 1 0 858.9213 1636.8729 S11s TMT10 11 (R) sGSAAQAEGLCK (Q) S(0.99)GS(0.0)AAQAEGLCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ALG3 50867.2 7 1 4360.1 32.77 HUMAN 1 -8.4595 -42.7757 GLRKRTSSIADEGTY-p Q9Y4I1-3;S1677-p GLRKRTSSIADEGTY 0.326502819643871 0.61079877964658 -0.146666666666667 0.0606666666666667 9.09971214846188 2.90842766668745 -0.146666666666667 0.0606666666666667 0.123035031605624 0.511867119969337 -1.82562504512866 0.701653986039064 Q9Y4I1 MYO5A Q9Y4I1.3.S1677.p_MYO5A Q9Y4I1-3_S1677s _1_1_1677_1677 Q9Y4I1-3 Q9Y4I1-3|F8WE88|F8W6H6|G3V394|Q9Y4I1-2 Isoform 3 of Unconventional myosin-Va HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.29710.29710.2 12.02 6.57 1.145 7 1 1 0 1076.0247 2071.0756 S1677s TMT10 1675 (R) TSsIADEGTYTLDSILR (Q) T(0.0)S(0.0)S(0.99)IADEGT(0.0)Y(0.0)T(0.0)LDS(0.0)ILR s:Phosphorylated S MYO5A 220315.4 4 69 296.5 379.15 HUMAN 1 -9.0997 2.9084 GLRKRTYSLTTPARQ-p Q9Y4H2;S577-p GLRKRTYSLTTPARQ 0.43606840550564 0.2594077397734 -0.150333333333333 0.161 6.63437283705009 7.71975209784748 -0.150333333333333 0.161 0.217051462409888 0.169053742743673 -1.39684774451473 1.58601982484066 Q9Y4H2 IRS2 Q9Y4H2.S577.p_IRS2 Q9Y4H2_S577s _1_1_577_577 Q9Y4H2 Q9Y4H2 Insulin receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7689.7689.3 8.71 8.71 1.244 5 1 1 0 492.2598 1394.7953 S577s TMT10 574 (K) RTYsLTTPAR (Q) RT(0.0)Y(0.0)S(0.99)LT(0.0)T(0.0)PAR s:Phosphorylated S IRS2 138529.8 2 4 1344.1 151.43 HUMAN 1 -6.6344 7.7198 GLRNMGLSPPASSTS-p Q9HC52;S130-p GLRNMGLSPPASSTS 0.286012107084712 0.24405168218422 0.217333333333333 -0.168666666666667 10.2576855810149 8.07117220243125 0.217333333333333 -0.168666666666667 0.094239167707319 0.155913162146155 2.02651696101114 -1.64697795341547 Q9HC52 CBX8 Q9HC52.S130.p_CBX8 Q9HC52_S130s _1_1_130_130 Q9HC52 Q9HC52 Chromobox protein homolog 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12040.12040.2 10.6 8.78 1.777 9 1 1 0 1075.4781 2069.9793 S130s TMT10 126 (R) NMGLsPPASSTSTSSTCR (A) NMGLS(0.99)PPAS(0.0)S(0.0)T(0.0)S(0.0)T(0.0)S(0.0)S(0.0)T(0.0)CR C:Carbamidomethylation,s:Phosphorylated S CBX8 43509.1 1 2 1574.1 130.51 HUMAN 1 10.2577 -8.0712 GLRPRTVSSPIPYTP-p Q16204;S351-p GLRPRTVSSPIPYTP 0.798199688105137 0.715852160895806 0.039 -0.035 1.88576940816557 1.99678936238016 0.039 -0.035 0.647773323781395 0.631423968961947 0.483353573385234 -0.508031954347249 Q16204 CCDC6 Q16204.S351.p_CCDC6 Q16204_S351s _1_1_351_351 Q16204 Q16204 Coiled-coil domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16921.16921.2 14.17 10.72 1.299 9 1 1 0 986.4857 1891.9963 S351s TMT10 349 (R) TVsSPIPYTPSPSSSR (P) T(0.0)VS(0.99)S(0.0)PIPY(0.0)T(0.0)PS(0.0)PS(0.0)S(0.0)S(0.0)R s:Phosphorylated S CCDC6 53461.2 8 10 423.1 319.68 HUMAN 1 1.8858 -1.9968 GLRRTLPSTSSSGSK-p P08651;S273-p GLRRTLPSTSSSGSK 0.179363691000628 0.251266725801573 -0.295666666666667 -0.124 14.7364989227268 7.90044924476617 -0.295666666666667 -0.124 0.0336008379196416 0.162164234205785 -2.82917587118564 -1.61738040954717 P08651 NFIC P08651.S273.p_NFIC P08651_S273s _1_1_273_273 P08651 A0A286YEX4|P08651|P08651-2|P08651-6|P08651-3|P08651-5|P08651-4 Nuclear factor 1 C-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9169.9169.2 10.3 6.73 1.132 7 1 1 0 795.4136 1509.8525 S273s TMT10 270 (R) TLPsTSSSGSK (R) T(0.0)LPS(0.99)T(0.0)S(0.0)S(0.0)S(0.0)GS(0.0)K K:TMT10,s:Phosphorylated S NFIC 56130.4 3 4 674.1 247.72 HUMAN 1 -14.7365 -7.9004 GLRWTPKSPLDPDSG-p Q9H4L4;S232-p GLRWTPKSPLDPDSG 0.487879237244645 0.539377456292216 0.0916666666666667 0.0603333333333333 5.74312093915701 3.60616044863586 0.0916666666666667 0.0603333333333333 0.266494288752931 0.435897075356383 1.23866435812182 0.840923719316353 Q9H4L4 SENP3 Q9H4L4.S232.p_SENP3 Q9H4L4_S232s _1_1_232_232 Q9H4L4 Q9H4L4|A0A087X0R7 Sentrin-specific protease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27870.27879.3 27.14 24.34 3.132 5 1 1 0 1051.8185 3073.4734 S232s TMT10 232 (K) sPLDPDSGLLSCTLPNGFGGQSGPEGER (S) S(0.99)PLDPDS(0.0)GLLS(0.0)CT(0.0)LPNGFGGQS(0.0)GPEGER C:Carbamidomethylation,s:Phosphorylated S SENP3 65636.2 31 7 396.1 329.46 HUMAN 1 5.7431 3.6062 GLSDNILSPVMNGGV-p Q5T2W1;S120-p GLSDNILSPVMNGGV 0.736758584530216 0.244094294214548 0.0466666666666667 0.113666666666667 2.51393497862617 8.07013107930647 0.0466666666666667 0.113666666666667 0.56053986183216 0.15595054329276 0.619831523437583 1.64679753980787 Q5T2W1 PDZK1 Q5T2W1.S120.p_PDZK1 Q5T2W1_S120s _1_1_120_120 Q5T2W1 Q5T2W1|Q5T2W1-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30190.30190.4 23.45 23.45 7.165 4 1 1 0 734.8595 2856.4512 S120s TMT10 111 (K) EQGLSDNILsPVMNGGVQTWTQPR (L) EQGLS(0.0)DNILS(0.99)PVMNGGVQT(0.0)WT(0.0)QPR s:Phosphorylated S PDZK1 57413.6 7 4 1301.1 156.33 HUMAN 1 2.5139 8.0701 GLSEAADSDAHLFQD-p Q9C0C2;S1602-p GLSEAADSDAHLFQD 0.674821726576008 0.644248945904196 0.0733333333333333 -0.057 3.20008539517172 2.60288415767882 0.0733333333333333 -0.057 0.47862068112844 0.549176043903435 0.760766990053079 -0.63844825683046 Q9C0C2 TNKS1BP1 Q9C0C2.S1602.p_TNKS1BP1 Q9C0C2_S1602s _1_1_1602_1602 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21932.21932.4 21.25 21.25 5.609 5 1 1 0 854.9218 3336.7022 S1602s TMT10 1585 (R) APVIRPGGTLGLSEAADsDAHLFQDSTEPR (A) APVIRPGGT(0.0)LGLS(0.0)EAADS(0.99)DAHLFQDS(0.0)T(0.0)EPR s:Phosphorylated S TNKS1BP1 182819.3 3 65 4.1 2105.7 HUMAN 1 3.2001 -2.6029 GLSEEDDSLVDVYYR-p Q14690;S1498-p GLSEEDDSLVDVYYR 0.921455118537035 0.0134399239574354 -0.021 -0.384 0.697867244033 26.0234472051072 -0.021 -0.384 0.851556122153337 0.00249836150423899 -0.19627436943602 -5.30077086067528 Q14690 PDCD11 Q14690.S1498.p_PDCD11 Q14690_S1498s _1_1_1498_1498 Q14690 Q14690 Protein RRP5 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18979.18979.3 13.05 13.05 5.513 4 1 1 0 833.081 2417.26 S1498s TMT10 1489 (K) KAGLSEEDDsLVDVYYR (E) KAGLS(0.0)EEDDS(0.99)LVDVY(0.0)Y(0.0)R K:TMT10,s:Phosphorylated S PDCD11 210066.3 3 5 1510.1 135.04 HUMAN 1 -0.6979 -26.0234 GLSGGRRTLENGVNV-p Q6N022;T2640-p GLSGGRRTLENGVNV 0.454939501024606 0.0224644789927254 -0.099 -0.454333333333333 6.30931724395629 22.5174002715127 -0.099 -0.454333333333333 0.23392049570749 0.00560092778082393 -1.33948434940014 -4.43642480337014 Q6N022 TENM4 Q6N022.T2640.p_TENM4 Q6N022_T2640t _1_1_2640_2640 Q6N022 Q6N022 Teneurin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.3904.3904.4 7.07 7.07 7.072 4 1 1 0 610.0755 2357.2986 T2640t TMT10 2640 (R) tLENGVNVTVSQINTVLNGR (T) T(0.99)LENGVNVT(0.0)VS(0.0)QINT(0.0)VLNGR t:Phosphorylated T TENM4 312572.5 2 2 5461.1 19.12 HUMAN 1 -6.3093 -22.5174 GLSHRRASLEERAVS-p O60683-2;S281-p GLSHRRASLEERAVS 0.124660294746138 0.0904200735547736 -0.460666666666667 0.271333333333333 18.8091251671362 13.8079425582539 -0.460666666666667 0.271333333333333 0.0131548979475785 0.0416107692108988 -3.62790822740385 2.6561567411312 O60683 PEX10 O60683.2.S281.p_PEX10 O60683-2_S281s _1_1_281_281 O60683-2 O60683-2|D6RBB0 Isoform 2 of Peroxisome biogenesis factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4497.4497.3 7.45 7.45 99 1 1 1 0 390.5339 1089.6214 S281s TMT10 279 (R) RAsLEER (A) RAS(1.0)LEER s:Phosphorylated S PEX10 39783.5 2 1 7149.1 7.45 HUMAN 1 -18.8091 13.8079 GLSKMIQTPDADLDV-p Q13155;T82-p GLSKMIQTPDADLDV 0.3249226720879 0.0886864327909416 -0.138666666666667 -0.186666666666667 9.14634967918825 13.9243441230693 -0.138666666666667 -0.186666666666667 0.121720865589588 0.0405103119694276 -1.83369977006907 -2.67744280219704 Q13155 AIMP2 Q13155.T82.p_AIMP2 Q13155_T82t _1_1_82_82 Q13155 Q13155|A8MU58 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37560.37560.4 32.1 32.1 14.233 7 1 1 0 1095.5652 4299.2682 T82t TMT10 79 (K) MIQtPDADLDVTNIIQADEPTTLTTNALDLNSVLGK (D) MIQT(0.99)PDADLDVT(0.0)NIIQADEPT(0.0)T(0.0)LT(0.0)T(0.0)NALDLNS(0.0)VLGK K:TMT10,t:Phosphorylated T AIMP2 35690.5 11 1 3944.1 40.41 HUMAN 1 -9.1463 -13.9243 GLSLSPQSPPERRGY-p Q7Z2Z1;S1433-p GLSLSPQSPPERRGY 0.911753399332893 0.00531589890047624 0.021 -0.691666666666667 0.781399624239365 33.0297646651121 0.021 -0.691666666666667 0.835333767330681 0.000497764057017418 0.218108645605453 -7.39628095372528 Q7Z2Z1 TICRR Q7Z2Z1.S1433.p_TICRR Q7Z2Z1_S1433s _1_1_1433_1433 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11759.11759.3 10.39 10.39 2.442 3 1 1 0 578.3027 1652.9281 S1433s TMT10 1426 (K) GLSLSPQsPPERR (G) GLS(0.0)LS(0.0)PQS(0.99)PPERR s:Phosphorylated S TICRR 212850 1 20 238.1 417.32 HUMAN 1 0.7814 -33.0298 GLSLTGDSCKLMLST-p Q12888-2;S517-p GLSLTGDSCKLMLST 0.903081498990585 0.0205007663178049 -0.0193333333333333 0.468 0.868854708472055 23.1112690881387 -0.0193333333333334 0.468 0.818680656500037 0.00488509587021448 -0.240650574130596 4.57562396866203 Q12888 TP53BP1 Q12888.2.S517.p_TP53BP1 Q12888-2_S517s _1_1_517_517 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22054.22054.3 20.93 20.16 1.108 4 1 1 0 744.3612 2151.1004 S517s TMT10 504 (K) NSPEDLGLSLTGDsCK (L) NS(0.0)PEDLGLS(0.0)LT(0.0)GDS(0.99)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TP53BP1 216167.2 2 22 3.1 2297.07 HUMAN 1 -0.8689 23.1113 GLSLWDTSPSYIDKL-p E7EPP6;S347-p GLSLWDTSPSYIDKL 0.0832139716415161 0.00119729192543449 -0.421 -1.00066666666667 23.0753251291926 48.1524230669186 -0.421 -1.00066666666667 0.00492569466365322 1.53023345759456e-05 -4.57225680647427 -14.4846095394979 E7EPP6 CHEK1 E7EPP6.S347.p_CHEK1 E7EPP6_S347s _1_1_347_347 E7EPP6 E7EPP6|O14757|O14757-3|J3KN87|O14757-2 Serine/threonine-protein kinase Chk1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29015.29015.3 18.1 18.1 2.253 6 1 1 0 741.0451 2141.1531 S347s TMT10 339 (R) TGLSLWDTsPSYIDK (L) T(0.0)GLS(0.0)LWDT(0.0)S(0.99)PS(0.0)Y(0.0)IDK K:TMT10,s:Phosphorylated S CHEK1 56201.4 1 5 3241.1 56.14 HUMAN 1 -23.0753 -48.1524 GLSNGEETPRRGFRR-p Q9NSI6-2;T687-p GLSNGEETPRRGFRR 0.115759929690015 0.0179936962970703 0.650333333333333 -0.747 19.4894477609161 24.0289261540546 0.650333333333333 -0.747 0.0112474798529537 0.00395464391362284 3.77022695773033 -4.79627825175663 Q9NSI6 BRWD1 Q9NSI6.2.T687.p_BRWD1 Q9NSI6-2_T687t _1_1_687_687 Q9NSI6-2 Q9NSI6|Q9NSI6-2 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4491.4491.3 12.04 8.45 2.552 2 1 1 0 508.9166 1444.7706 T687t TMT10 680 (R) GLSNGEEtPRR (G) GLS(0.0)NGEET(0.99)PRR t:Phosphorylated T BRWD1 259915.1 1 4 208.1 444.81 HUMAN 1 19.4894 -24.0289 GLSRHRASFLGGRRR-p Q6UXT9;S434-p GLSRHRASFLGGRRR 0.0393397491225838 0.007649513650849 -1.37266666666667 -1.56666666666667 31.6895798819344 30.218666508301 -1.37266666666667 -1.56666666666667 0.000677707062947307 0.000950896719592408 -6.96311392095738 -6.48854661391025 Q6UXT9 ABHD15 Q6UXT9.S434.p_ABHD15 Q6UXT9_S434s _1_1_434_434 Q6UXT9 Q6UXT9 Protein ABHD15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5469.5469.3 7.29 7.29 99 1 1 1 0 437.2291 1229.7065 S434s TMT10 431 (R) HRAsFLGGR (R) HRAS(1.0)FLGGR s:Phosphorylated S ABHD15 52626 1 1 5490.1 18.82 HUMAN 1 -31.6896 -30.2187 GLTANARSPQGQLDT-p Q5T5Y3-3;S586-p GLTANARSPQGQLDT 0.440361201395823 0.630984865857374 -0.130666666666667 0.0563333333333333 6.56138008592102 2.7192407638098 -0.130666666666667 0.0563333333333333 0.220730319241598 0.534657820424689 -1.38399483451754 0.662698173974381 Q5T5Y3 CAMSAP1 Q5T5Y3.3.S586.p_CAMSAP1 Q5T5Y3-3_S586s _1_1_586_586 Q5T5Y3-3 Q5T5Y3-3|Q5T5Y3-2 Isoform 3 of Calmodulin-regulated spectrin-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32808.32874.5 26.88 23.1 4.259 5 1 1 0 851.6643 4174.328 S586s TMT10 586 (R) sPQGQLDTSESKPDSFFLEPLMPAVLKPAK (E) S(0.99)PQGQLDT(0.0)S(0.0)ES(0.0)KPDS(0.0)FFLEPLMPAVLKPAK K:TMT10,s:Phosphorylated S CAMSAP1 180710.7 8 7 220.1 428.42 HUMAN 1 -6.5614 2.7192 GLTAQIQSFGRSMSS-p Q14789-2;S2740-p GLTAQIQSFGRSMSS 0.319218928858113 0.0436038008077987 0.182 -0.308666666666667 9.28435059460296 18.2237702937425 0.182 -0.308666666666667 0.117913882800993 0.0150529968456719 1.85759718079146 -3.50478011273229 Q14789 GOLGB1 Q14789.2.S2740.p_GOLGB1 Q14789-2_S2740s _1_1_2740_2740 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18275.18275.2 10.44 10.44 10.442 2 1 1 0 743.8856 1406.7953 S2740s TMT10 2733 (K) GLTAQIQsFGR (S) GLT(0.0)AQIQS(0.99)FGR s:Phosphorylated S GOLGB1 378557.2 1 24 93.1 610.98 HUMAN 1 9.2844 -18.2238 GLTDDQVSGPPSAPA-p Q92734;S193-p GLTDDQVSGPPSAPA 0.346678857896147 0.824898780665274 0.131 -0.0246666666666667 8.55040168968306 1.17063580959702 0.131 -0.0246666666666667 0.139623921347319 0.763723965768877 1.73053358704477 -0.316117545288754 Q92734 TFG Q92734.S193.p_TFG Q92734_S193s _1_1_193_193 Q92734 Q92734|Q92734-2|Q92734-3|Q92734-4 Protein TFG HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26015.26015.3 18.84 18.84 1.78 4 1 1 0 924.0926 2690.2929 S193s TMT10 180 (K) NVMSAFGLTDDQVsGPPSAPAEDR (S) NVMS(0.0)AFGLT(0.0)DDQVS(0.99)GPPS(0.0)APAEDR s:Phosphorylated S TFG 43504.2 2 5 2044.1 101.04 HUMAN 1 8.5504 -1.1706 GLTFPDYSDSTEVKF-p O75164;S457-p GLTFPDYSDSTEVKF 0.164586423343969 0.927601724721068 0.260666666666667 0.00933333333333334 15.6944543483305 0.461240696713615 0.260666666666667 0.00933333333333334 0.0269497391013578 0.899240648885373 3.00973972350726 0.132667858491174 O75164 KDM4A O75164.S457.p_KDM4A O75164_S457s _1_1_457_457 O75164 O75164 Lysine-specific demethylase 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28458.28458.4 18.36 18.36 2.62 5 1 1 0 861.6838 3363.7451 S457s TMT10 446 (R) QVEDGLTFPDYsDSTEVKFEELK (N) QVEDGLT(0.0)FPDY(0.0)S(0.99)DS(0.0)T(0.0)EVKFEELK K:TMT10,s:Phosphorylated S KDM4A 122657 1 1 3072.1 61.53 HUMAN 1 15.6945 0.4612 GLTLQSVSPQSLQGK-p Q9HAU0-6;S613-p GLTLQSVSPQSLQGK 0.732306551743324 0.150956174272158 -0.0543333333333333 -0.17 2.56527006014176 10.7989843752452 -0.0543333333333334 -0.17 0.553953096044519 0.0831958306998289 -0.630640771002668 -2.11999345251116 Q9HAU0 PLEKHA5 Q9HAU0.6.S613.p_PLEKHA5 Q9HAU0-6_S613s _1_1_613_613 Q9HAU0-6 Q9HAU0-6|Q9HAU0-4|Q9HAU0-2|Q9HAU0-8 Isoform 6 of Pleckstrin homology domain-containing family A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24400.24400.3 23.06 23.76 1.171 5 1 1 0 812.4507 2355.3648 S613s TMT10 602 (R) SVPAGLTLQSVsPQSLQGK (T) S(0.0)VPAGLT(0.0)LQS(0.0)VS(0.99)PQS(0.0)LQGK K:TMT10,s:Phosphorylated S PLEKHA5 147692.6 1 8 374.1 338.83 HUMAN 1 -2.5653 -10.799 GLTPAPASPPVLPRR-p C9J069;S109-p GLTPAPASPPVLPRR 0.780774653521955 0.806968561983506 0.0473333333333333 0.0253333333333334 2.06594645936593 1.30352328583557 0.0473333333333334 0.0253333333333334 0.62144880045639 0.740709084985152 0.523357327855777 0.348335996479672 C9J069 C9orf172 C9J069.S109.p_C9orf172 C9J069_S109s _1_1_109_109 C9J069 C9J069 Uncharacterized protein C9orf172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21828.21828.3 18.12 18.12 4.978 2 1 1 0 649.6937 1867.1003 S109s TMT10 99 (R) APPGLTPAPAsPPVLPR (R) APPGLT(0.0)PAPAS(0.99)PPVLPR s:Phosphorylated S C9orf172 107960.6 5 3 430.1 316.49 HUMAN 1 2.0659 1.3035 GLTPRLCSGVLGTVV-p Q9Y6C9;S80-p GLTPRLCSGVLGTVV 0.213516296888393 0.0960807616538465 0.200333333333333 0.206666666666667 12.9269033307415 13.4536397510456 0.200333333333333 0.206666666666667 0.0509694171020608 0.0451477409939717 2.49790360071955 2.59165905699344 Q9Y6C9 MTCH2 Q9Y6C9.S80.p_MTCH2 Q9Y6C9_S80s _1_1_80_80 Q9Y6C9 Q9Y6C9 Mitochondrial carrier homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22408.22408.3 15.94 15.94 1.657 2 1 1 0 622.3438 1785.0457 S80s TMT10 78 (R) LCsGVLGTVVHGK (V) LCS(0.99)GVLGT(0.0)VVHGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTCH2 33957.9 1 3 3112.1 60.36 HUMAN 1 12.9269 13.4536 GLTSGSASPPPPALP-p Q92610;S691-p GLTSGSASPPPPALP 0.830364356065644 0.520261168788988 0.0336666666666667 0.0613333333333334 1.55514743882029 3.81213056442871 0.0336666666666667 0.0613333333333334 0.699013005536589 0.415706622861899 0.407865975180096 0.880899317857727 Q92610 ZNF592 Q92610.S691.p_ZNF592 Q92610_S691s _1_1_691_691 Q92610 Q92610|H0YM74 Zinc finger protein 592 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22189.22189.3 15.19 15.19 1.167 5 1 1 0 879.1223 2555.3819 S691s TMT10 683 (K) HGLTSGSAsPPPPALPLYPDPVR (L) HGLT(0.0)S(0.0)GS(0.0)AS(0.99)PPPPALPLY(0.0)PDPVR s:Phosphorylated S ZNF592 140207.3 4 15 164.1 494.76 HUMAN 1 1.5551 3.8121 GLVKYMNSGPVVAMV-p Q32Q12;S210-p GLVKYMNSGPVVAMV 0.985233176781 0.0393853459220035 -0.00300000000000001 0.284333333333333 0.12997589359437 18.8454252847755 -0.00300000000000001 0.284333333333333 0.970515354274992 0.0130454021471233 -0.03870249062473 3.63227895585855 Q32Q12 NotFound Q32Q12.S210.p_NotFound Q32Q12_S210s _1_1_210_210 Q32Q12 Q32Q12|P22392-2|O60361 Nucleoside diphosphate kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37693.37693.3 22.55 18.63 5.247 2 1 1 0 877.7862 2551.3817 S210s TMT10 207 (K) YMNsGPVVAMVWEGLNVVK (T) Y(0.0)MNS(0.99)GPVVAMVWEGLNVVK K:TMT10,s:Phosphorylated S NME1-NME2 32926.7 1 6 2569.1 78.26 HUMAN 1 -0.13 18.8454 GLVPRERSDSGGSSS-p P48634;S759-p GLVPRERSDSGGSSS 0.33341610353663 0.324390175546106 -0.137333333333333 -0.103666666666667 8.90302168779905 6.46717545662971 -0.137333333333333 -0.103666666666667 0.128735353891328 0.225570579017016 -1.79157546493767 -1.36703401418505 P48634 PRRC2A P48634.S759.p_PRRC2A P48634_S759s _1_1_759_759 P48634 P48634|P48634-3|P48634-2|P48634-4 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5860.5860.3 12.97 12.97 2.197 5 1 1 0 641.2759 1841.8463 S759s TMT10 757 (R) ERsDSGGSSSEPFDR (H) ERS(0.99)DS(0.0)GGS(0.0)S(0.0)S(0.0)EPFDR s:Phosphorylated S PRRC2A 229315.4 5 10 36.1 882.05 HUMAN 1 -8.903 -6.4672 GLVSTPISPQLVNQQ-p Q01826-2;S313-p GLVSTPISPQLVNQQ 0.565856073226583 0.878344041280567 0.129333333333333 -0.027 4.5556022574186 0.791171434569397 0.129333333333333 -0.027 0.3502997071579 0.83345634380283 1.0219514433027 -0.220622046511675 Q01826 SATB1 Q01826.2.S313.p_SATB1 Q01826-2_S313s_1_1_313_313 Q01826-2 Q01826-2 Isoform 2 of DNA-binding protein SATB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.36021.36021.4 26.28 26.28 3.377 5 1 1 0 1130.3586 4421.4329 S313s N318n M323m TMT10 298 (R) TPLPNLHPGLVSTPIsPQLVnQQLVmAQLLNQQYAVNR (L) T(0.0)PLPN(0.0)LHPGLVS(0.0)T(0.0)PIS(0.99)PQLVN(0.99)QQLVM(1.0)AQLLN(0.0)QQY(0.0)AVN(0.0)R s:Phosphorylated S,n:Deamidated,m:Oxidized methionine SATB1 89467.4 10 6 821.1 218.79 HUMAN 1 4.5556 -0.7912 GLVYKSGSGEIGSET-p A0JNW5;S989-p GLVYKSGSGEIGSET 0.391198751974399 0.0591582653567733 0.132333333333333 -0.256333333333333 7.52085343168265 16.3600842577342 0.132333333333333 -0.256333333333333 0.176976114854573 0.0231201993410237 1.55191247192591 -3.13536165254468 A0JNW5 UHRF1BP1L A0JNW5.S989.p_UHRF1BP1L A0JNW5_S989s _1_1_989_989 A0JNW5 A0JNW5|A0A0C4DGH6 UHRF1-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7968.7968.3 15.15 15.15 2.084 5 1 1 0 717.0381 2069.1329 S989s TMT10 987 (K) SGsGEIGSETSDKK (D) S(0.0)GS(0.99)GEIGS(0.0)ET(0.0)S(0.0)DKK K:TMT10,s:Phosphorylated S UHRF1BP1L 165621.9 6 11 398.1 328.88 HUMAN 1 7.5209 -16.3601 GLYSRSGSLSGRSSL-p Q16512-2;S380-p GLYSRSGSLSGRSSL 0.0459711305665682 0.190013173716585 0.502666666666667 0.222333333333333 29.7147430720645 9.48385232548596 0.502666666666667 0.222333333333333 0.0010678879667553 0.112619804072181 6.34580083912133 1.89143895487774 Q16512 PKN1 Q16512.2.S380.p_PKN1 Q16512-2_S380s _1_1_380_380 Q16512-2 Q16512-2|Q16512-3 Isoform 2 of Serine/threonine-protein kinase N1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4319.4319.2 9.69 3.43 1.406 3 1 1 0 486.7397 892.505 S380s TMT10 378 (R) SGsLSGR (S) S(0.0)GS(0.99)LS(0.0)GR s:Phosphorylated S PKN1 105469.7 1 4 721.1 237.15 HUMAN 1 29.7147 9.4839 GMAVVVRSPLRTSLS-p Q9BR39;S157-p GMAVVVRSPLRTSLS 0.656769255604447 0.652137445248403 -0.0656666666666667 -0.0476666666666667 3.42719519482348 2.53522623765842 -0.0656666666666667 -0.0476666666666667 0.454234880571138 0.557798543903368 -0.805921580462158 -0.624240226347066 Q9BR39 JPH2 Q9BR39.S157.p_JPH2 Q9BR39_S157s _1_1_157_157 Q9BR39 Q9BR39 Junctophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20305.20305.3 14.3 14.3 9.322 3 1 1 0 690.0385 1988.1313 S157s TMT10 145 (R) QSVPYGMAVVVRsPLR (T) QS(0.0)VPY(0.0)GMAVVVRS(0.99)PLR s:Phosphorylated S JPH2 74448.4 2 1 1028.1 186.58 HUMAN 1 -3.4272 -2.5352 GMDNQGGYGSVGRMG-p P31942;Y296-p GMDNQGGYGSVGRMG 0.42532843338867 0.041942329830693 -0.151333333333333 -0.355666666666667 6.83916757893419 18.4582127291825 -0.151333333333333 -0.355666666666667 0.207053817502249 0.0142619440078284 -1.43282992849494 -3.55259742992984 P31942 HNRNPH3 P31942.Y296.p_HNRNPH3 P31942_Y296y _1_1_296_296 P31942 P31942|P31942-2|P31942-3|P31942-4 Heterogeneous nuclear ribonucleoprotein H3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.7912.7960.2 20.81 16.42 1.415 2 1 1 0 861.3595 1641.7488 Y296y TMT10 288 (R) DGMDNQGGyGSVGR (M) DGMDNQGGY(0.99)GS(0.0)VGR y:Phosphorylated Y HNRNPH3 36982.9 2 2 81.1 32.19 HUMAN 1 -6.8392 -18.4582 GMDPEQASVTNQNEY-p Q5W0Z9;S305-p GMDPEQASVTNQNEY 0.371635125686735 0.28958699086013 -0.141333333333333 -0.125666666666667 7.9711972948507 7.10134127447262 -0.141333333333333 -0.125666666666667 0.159543924422023 0.194924250300413 -1.63016369618619 -1.478326695789 Q5W0Z9 ZDHHC20 Q5W0Z9.S305.p_ZDHHC20 Q5W0Z9_S305s _1_1_305_305 Q5W0Z9 Q5W0Z9|Q5W0Z9-3|Q5W0Z9-4|B4DRN8 Probable palmitoyltransferase ZDHHC20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18799.18799.2 15.12 10.54 2.125 3 1 1 0 1216.0614 2351.1499 S305s TMT10 296 (R) LVGMDPEQAsVTNQNEYAR (S) LVGMDPEQAS(0.99)VT(0.0)NQNEY(0.0)AR s:Phosphorylated S ZDHHC20 43075.5 1 1 4532.1 30.25 HUMAN 1 -7.9712 -7.1013 GMEDPSISFSKPKKK-p O00567;S502-p GMEDPSISFSKPKKK 0.451306438948046 0.00327985194850021 -0.113666666666667 -0.619 6.37969633238739 37.2124222190525 -0.113666666666667 -0.619 0.23016027445686 0.000190001827471484 -1.35193285086317 -8.94551885978414 O00567 NOP56 O00567.S502.p_NOP56 O00567_S502s_1_1_502_502 O00567 O00567 Nucleolar protein 56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15590.15590.5 19.02 16.5 1.108 3 1 1 0 723.3821 3516.9178 M496m S502s TMT10 485 (K) QKPQEVPQENGmEDPSIsFSKPK (K) QKPQEVPQENGM(1.0)EDPS(0.0)IS(0.99)FS(0.0)KPK K:TMT10,m:Oxidized methionine,s:Phosphorylated S NOP56 66448.1 8 5 262.1 396.77 HUMAN 1 -6.3797 -37.2124 GMEESPQSVGRQEKE-p Q5T481;S865-p GMEESPQSVGRQEKE 0.316098233401141 0.0122066483782641 -0.390666666666667 0.657 9.36337144791394 26.7130378332196 -0.390666666666667 0.657 0.11578781410745 0.00213155339777752 -1.87128465390783 5.48367139035484 Q5T481 RBM20 Q5T481.S865.p_RBM20 Q5T481_S862sS865s_2_2_862_865 Q5T481 Q5T481 RNA-binding protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12409.12409.4 12.82 12.82 7.992 3 2 2 0 1025.4645 3938.8951 S862s S865s TMT10 843 (K) ENTMAENEAGKEEQEGMEEsPQsVGRQEK (E) ENT(0.0)MAENEAGKEEQEGMEES(0.99)PQS(0.99)VGRQEK K:TMT10,s:Phosphorylated S RBM20 135496 3 15 522.1 283.33 HUMAN 1 -9.3634 26.713 GMESAYVSPSGYRLV-p Q15276;S503-p GMESAYVSPSGYRLV 0.98701560524362 0.849290413379572 0.00266666666666666 -0.0446666666666666 0.115508440602117 0.996900200969302 0.00266666666666666 -0.0446666666666666 0.973753778598086 0.794895392937973 0.0344495154081458 -0.273073809608129 Q15276 RABEP1 Q15276.S503.p_RABEP1 Q15276_S503s _1_1_503_503 Q15276 Q15276|Q15276-2 Rab GTPase-binding effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35698.35698.3 25.89 25.89 1.561 11 1 1 0 1205.885 3535.677 S503s TMT10 478 (K) AMTPEQEETASLLSSVTQGMESAYVsPSGYR (L) AMT(0.0)PEQEET(0.0)AS(0.0)LLS(0.0)S(0.0)VT(0.0)QGMES(0.0)AY(0.0)VS(0.99)PS(0.0)GY(0.0)R s:Phosphorylated S RABEP1 99688.1 1 10 933.1 198.92 HUMAN 1 0.1155 -0.9969 GMESLTVTPCSKASA-p O60231;T712-p GMESLTVTPCSKASA 0.224767265517543 0.480672458008631 -0.192333333333333 -0.088 12.44932380844 4.24636216643414 -0.192333333333333 -0.088 0.0568941507492493 0.37615235342271 -2.4122951679378 -0.963767939487098 O60231 DHX16 O60231.T712.p_DHX16 O60231_T712t _1_1_712_712 O60231 O60231|Q5SQH5|A0A140T8Y5 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16959.16959.3 8.74 8.74 1.371 5 1 1 0 650.3237 1868.9862 T712t TMT10 704 (R) TGMESLTVtPCSK (A) T(0.0)GMES(0.0)LT(0.0)VT(0.99)PCS(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T DHX16 119946.1 1 5 2216.1 93.19 HUMAN 1 -12.4493 -4.2464 GMGQKDSYVGDEAQS-p P63261;Y53-p GMGQKDSYVGDEAQS 0.165305341584259 0.0765917564808867 -0.605333333333333 0.218666666666667 15.6535654014345 14.8073303382804 -0.605333333333334 0.218666666666667 0.0272046698554321 0.0330572685697813 -3.00195029398235 2.84056886627354 P63261 ACTG1 P63261.Y53.p_ACTG1 P63261_Y53y _1_1_53_53 P63261 P68032|P63267|P60709|P63261|A6NL76|J3KT65 Actin, cytoplasmic 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.9794.9872.2 21.99 16.01 2.291 3 1 1 0 868.9113 1656.8481 Y53y TMT10 51 (K) DSyVGDEAQSK (R) DS(0.0)Y(0.99)VGDEAQS(0.0)K K:TMT10,y:Phosphorylated Y ACTG1 42134.4 3 2 1.1 138.33 HUMAN 1 -15.6536 14.8073 GMIDRLNSPLLSNKT-p P48552;S671-p GMIDRLNSPLLSNKT 0.490692853704506 0.0619237436116897 -0.0996666666666667 0.32 5.69373351167777 16.0824925249449 -0.0996666666666667 0.32 0.269542125572286 0.0246462442148153 -1.22980657875555 3.08185421474435 P48552 NRIP1 P48552.S671.p_NRIP1 P48552_S671s _1_1_671_671 P48552 P48552 Nuclear receptor-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26234.26234.5 18.76 18.76 4.544 4 1 1 0 701.9944 3425.9757 S671s TMT10 653 (K) QLLTGNTDKPIGMIDRLNsPLLSNK (T) Q(0.0)LLT(0.0)GN(0.0)T(0.0)DKPIGM(0.0)IDRLN(0.0)S(0.99)PLLS(0.0)N(0.0)K K:TMT10,s:Phosphorylated S NRIP1 127738.5 2 8 807.1 221.77 HUMAN 1 -5.6937 16.0825 GMIHRQGSLHVGDEI-p Q00013;S110-p GMIHRQGSLHVGDEI 0.371245119506723 0.0818330137494099 -0.171333333333333 -0.194333333333333 7.98039024194238 14.4102882307149 -0.171333333333333 -0.194333333333333 0.159206566313095 0.0362218958025188 -1.63175864403567 -2.76684538309364 Q00013 MPP1 Q00013.S110.p_MPP1 Q00013_S110s _1_1_110_110 Q00013 Q00013|Q00013-3|Q00013-2 55 kDa erythrocyte membrane protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22374.22374.4 23.01 23.01 14.264 4 1 1 0 896.7113 3503.8494 S110s TMT10 108 (R) QGsLHVGDEILEINGTNVTNHSVDQLQK (A) QGS(0.99)LHVGDEILEINGT(0.0)NVT(0.0)NHS(0.0)VDQLQK K:TMT10,s:Phosphorylated S MPP1 52523.7 2 1 5098.1 23.01 HUMAN 1 -7.9804 -14.4103 GMKKWPRTPKEEAQS-p P46013;T1091-p GMKKWPRTPKEEAQS 0.28850766089035 0.0183351288076971 -0.177333333333333 -0.385666666666667 10.1797709041949 23.9056159136685 -0.177333333333333 -0.385666666666667 0.095945124244161 0.00406853829966461 -2.01296084056863 -4.76622443121275 P46013 MKI67 P46013.T1091.p_MKI67 P46013_T1091t _1_1_1091_1091 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23862.23862.5 14.11 9.04 3.864 2 1 1 0 666.173 3246.8657 T1091t TMT10 1087 (K) KWPRtPKEEAQSLEDLAGFK (E) KWPRT(0.99)PKEEAQS(0.0)LEDLAGFK K:TMT10,t:Phosphorylated T MKI67 360912.4 4 25 5.1 1918.46 HUMAN 1 -10.1798 -23.9056 GMLVRMASAPSGNVA-p P31629;S1613-p GMLVRMASAPSGNVA 0.857486466676903 0.229981084591192 0.028 0.155333333333333 1.30167965709309 8.40892542966349 0.028 0.155333333333333 0.741023591043023 0.144247221677959 0.347928783825139 1.70546480258729 P31629 HIVEP2 P31629.S1613.p_HIVEP2 P31629_S1613s _1_1_1613_1613 P31629 P31629 Transcription factor HIVEP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.37638.37638.4 27.09 27.09 2.367 6 1 1 0 937.4659 3666.8709 S1613s TMT10 1611 (R) MAsAPSGNVADSTLLLTDMADFQQILQFPSLR (T) MAS(0.99)APS(0.0)GNVADS(0.0)T(0.0)LLLT(0.0)DMADFQQILQFPS(0.0)LR s:Phosphorylated S HIVEP2 271273.5 2 12 465.2 303.46 HUMAN 1 1.3017 8.4089 GMPGALPSLPGKI__-p Q9NS69;S137-p GMPGALPSLPGKI__ 0.769192567611738 0.674666353047967 0.0783333333333333 0.114 2.18384955875093 2.3360419093093 0.0783333333333333 0.114 0.60480454217674 0.583977089227378 0.549142580664208 0.581926799887831 Q9NS69 TOMM22 Q9NS69.S137.p_TOMM22 Q9NS69_S137s _1_1_137_137 Q9NS69 Q9NS69 Mitochondrial import receptor subunit TOM22 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.35377.35377.3 13.38 13.38 2.286 3 1 1 0 976.2141 2846.6578 S137s TMT10 118 (R) QILLGPNTGLSGGMPGALPsLPGKI (-) Q(0.0)ILLGPN(0.0)T(0.0)GLS(0.0)GGM(0.0)PGALPS(0.99)LPGKI K:TMT10,s:Phosphorylated S TOMM22 15521.3 1 3 3000.1 63.57 HUMAN 1 2.1838 2.336 GMQNEPLTPGYHGFP-p O43251-8;T67-p GMQNEPLTPGYHGFP 0.0902596632769008 0.414531335045367 0.348666666666667 -0.079 22.2228178551018 5.08710395111227 0.348666666666667 -0.079 0.00599402036968294 0.309948547081781 4.37306888329798 -1.11976698687278 O43251 RBFOX2 O43251.8.T67.p_RBFOX2 O43251-8_T67t _1_1_67_67 O43251-8 O43251-8|O43251-6 Isoform 8 of RNA binding protein fox-1 homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15769.15769.3 25.02 25.02 8.889 3 1 1 0 1013.7882 2959.3842 T67t TMT10 50 (R) TEEAAADGGGGMQNEPLtPGYHGFPAR (D) T(0.0)EEAAADGGGGMQNEPLT(0.99)PGY(0.0)HGFPAR t:Phosphorylated T RBFOX2 47342.4 3 2 3970.1 39.99 HUMAN 1 22.2228 -5.0871 GMSFSRKSYRLTSDA-p Q5XPI4-2;S14-p GMSFSRKSYRLTSDA 0.167369216436162 0.0944655882859214 0.301666666666667 -0.208333333333333 15.5180928626228 13.5527571424947 0.301666666666667 -0.208333333333333 0.0280666587149522 0.0441290202883793 2.97619650249921 -2.60965895862447 Q5XPI4 RNF123 Q5XPI4.2.S14.p_RNF123 Q5XPI4-2_S14s _1_1_14_14 Q5XPI4-2 Q5XPI4-2|C9JS59|F8WB91 Isoform 2 of E3 ubiquitin-protein ligase RNF123 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9960.9960.3 9.23 9.23 9.225 4 1 1 0 569.9641 1627.9056 S14s TMT10 14 (K) sYRLTSDAEK (S) S(0.99)Y(0.0)RLT(0.0)S(0.0)DAEK K:TMT10,s:Phosphorylated S RNF123 150610.2 1 1 4538.1 30.13 HUMAN 1 15.5181 -13.5528 GMTPGLMTPGTGELD-p O94906;T232-p GMTPGLMTPGTGELD 0.290884494360713 0.897527952892483 0.183 -0.0153333333333333 10.1106006931692 0.657515263269742 0.183 -0.0153333333333333 0.0974854791630621 0.859505131055955 2.00093230363703 -0.185598746677866 O94906 PRPF6 O94906.T232.p_PRPF6 O94906_T232t_1_1_232_232 O94906 O94906|O94906-2 Pre-mRNA-processing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29250.29250.5 23.53 19.76 2.451 8 1 1 0 919.0542 4510.2609 N219n T232t TMT10 204 (R) QTQFGGLNTPYPGGLnTPYPGGMTPGLMtPGTGELDMRK (I) Q(0.0)T(0.0)QFGGLN(0.0)T(0.0)PY(0.0)PGGLN(0.99)T(0.0)PY(0.0)PGGM(0.0)T(0.0)PGLM(0.0)T(0.99)PGT(0.0)GELDM(0.0)RK K:TMT10,n:Deamidated,t:Phosphorylated T PRPF6 107721.8 3 5 1650.1 123.56 HUMAN 1 10.1106 -0.6575 GMVQQIQSVCMECQG-p P31689;S175-p GMVQQIQSVCMECQG 0.456504330170077 0.507601835399382 0.123333333333333 0.067 6.27503247023445 3.94656905651086 0.123333333333333 0.067 0.235774456810544 0.403035308068784 1.33341404035458 0.906750294190785 P31689 DNAJA1 P31689.S175.p_DNAJA1 P31689_S175s _1_1_175_175 P31689 P31689|P31689-2 DnaJ homolog subfamily A member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18271.18271.4 17.75 17.75 99 1 1 1 0 797.8752 3108.4797 S175s TMT10 162 (R) IHQIGPGMVQQIQsVCMECQGHGER (I) IHQIGPGMVQQIQS(1.0)VCMECQGHGER C:Carbamidomethylation,s:Phosphorylated S DNAJA1 45609.1 3 3 1959.1 105.16 HUMAN 1 6.275 3.9466 GMYPDPHSPFAVSPI-p P41162;S245-p GMYPDPHSPFAVSPI 0.090424384916148 0.136320585772495 -0.329666666666667 -0.232 22.2108977868314 11.4037983559825 -0.329666666666667 -0.232 0.0060104947385472 0.0723802642632644 -4.37032357128891 -2.22596245404678 P41162 ETV3 P41162.S245.p_ETV3 P41162_S245s _1_1_245_245 P41162 P41162 ETS translocation variant 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27854.27854.5 21.03 14.1 3.494 3 1 1 0 800.4286 3918.1439 S245s TMT10 225 (K) RKPDIMLPLFARPGMYPDPHsPFAVSPIPGR (G) RKPDIMLPLFARPGMY(0.0)PDPHS(0.99)PFAVS(0.0)PIPGR K:TMT10,s:Phosphorylated S ETV3 57285.5 2 4 2187.1 94.05 HUMAN 1 -22.2109 -11.4038 GNAAARTSPTVATQT-p Q6P1L5;S106-p GNAAARTSPTVATQT 0.993710639248846 0.560890758971814 0.00233333333333334 -0.0956666666666667 0.0562297762535575 3.38539063161021 0.00233333333333334 -0.0956666666666667 0.987136072353016 0.458628392037879 0.0168815608080207 -0.797538620767156 Q6P1L5 FAM117B Q6P1L5.S106.p_FAM117B Q6P1L5_S106s _1_1_106_106 Q6P1L5 Q6P1L5|Q6P1L5-2 Protein FAM117B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7443.7443.2 9.09 3.43 1.162 9 1 1 0 973.4759 1865.9766 S106s TMT10 105 (R) TsPTVATQTGASATSTR (G) T(0.0)S(0.99)PT(0.0)VAT(0.0)QT(0.0)GAS(0.0)AT(0.0)S(0.0)T(0.0)R s:Phosphorylated S FAM117B 62537.3 2 2 492.1 293.79 HUMAN 1 0.0562 -3.3854 GNCPECGTPLRKSNF-p P51948;T51-p GNCPECGTPLRKSNF 0.559938304867739 0.0117880151326881 0.088 -0.599666666666667 4.64918985417729 26.9566457779316 0.088 -0.599666666666667 0.342831733431421 0.00201528012672531 1.03935934235439 -5.54937993481942 P51948 MNAT1 P51948.T51.p_MNAT1 P51948_T51t _1_1_51_51 P51948 P51948|P51948-2 CDK-activating kinase assembly factor MAT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7504.7504.3 15.42 10.98 99 1 1 1 0 685.6689 1975.0254 T51t TMT10 42 (R) GAGNCPECGtPLRK (S) GAGNCPECGT(1.0)PLRK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MNAT1 36278.7 3 1 4693.1 27.85 HUMAN 1 4.6492 -26.9566 GNDEKIASVETESEG-p Q68DA7-5;S99-p GNDEKIASVETESEG 0.696126275578029 0.00450277258668528 -0.074 0.660666666666667 2.95585306261062 34.4237396936197 -0.074 0.660666666666667 0.506307888266826 0.000361098787903889 -0.711431206201718 7.88446352255857 Q68DA7 FMN1 Q68DA7.5.S99.p_FMN1 Q68DA7-5_S99s _1_1_99_99 Q68DA7-5 Q68DA7-5|Q68DA7-3 Isoform 5 of Formin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9915.9915.3 12.98 5.26 2.201 4 1 1 0 687.0201 1979.081 S99s TMT10 97 (K) IAsVETESEGSQRK (E) IAS(0.99)VET(0.0)ES(0.0)EGS(0.0)QRK K:TMT10,s:Phosphorylated S FMN1 132895.4 1 5 727.1 236.56 HUMAN 1 -2.9559 34.4237 GNDELKDSEEFGENE-p Q9NWH9;S126-p GNDELKDSEEFGENE 0.33286094806896 0.00209330345879932 -0.496333333333333 0.944 8.91876101997186 41.717240124597 -0.496333333333333 0.944 0.128269646541473 6.73404458634099e-05 -1.79429994874635 10.9313790466892 Q9NWH9 SLTM Q9NWH9.S126.p_SLTM Q9NWH9_S126s _1_1_126_126 Q9NWH9 Q9NWH9 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12913.12913.5 22.03 22.03 6.786 2 1 1 0 980.8328 4820.1593 S126s TMT10 106 (K) DCELENQEAHEQDGNDELKDsEEFGENEEENVHSK (E) DCELENQEAHEQDGNDELKDS(0.99)EEFGENEEENVHS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLTM 117431.6 1 2 167.1 494.15 HUMAN 1 -8.9188 41.7172 GNDILCLSLPDKPPP-p P42695;S1458-p GNDILCLSLPDKPPP 0.226639891780037 0.0162895845325298 0.236333333333333 -0.445666666666667 12.3856023592482 24.6950838866841 0.236333333333333 -0.445666666666667 0.0577350789562827 0.00339227937079276 2.40092242358089 -4.96086954761475 P42695 NCAPD3 P42695.S1458.p_NCAPD3 P42695_S1458sS1474s_2_2_1458_1474 P42695 P42695 Condensin-2 complex subunit D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25696.25696.4 9.51 9.51 3.064 3 2 2 0 979.9856 3757.0008 S1458s S1474s TMT10 1449 (R) SQGNDILCLsLPDKPPPQPQQWNVRsPAR (N) S(0.0)QGNDILCLS(0.99)LPDKPPPQPQQWNVRS(0.99)PAR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NCAPD3 171055.8 1 13 1254.1 161.61 HUMAN 1 12.3856 -24.6951 GNDMLMNTPRAHTVE-p Q9BVW5;T233-p GNDMLMNTPRAHTVE 0.868826411250003 0.171834089513715 0.0346666666666667 -0.157 1.19194334849479 10.0556101356165 0.0346666666666667 -0.157 0.759986127928691 0.0987276924536966 0.321355792270519 -1.99056350923138 Q9BVW5 TIPIN Q9BVW5.T233.p_TIPIN Q9BVW5_T233t _1_1_233_233 Q9BVW5 Q9BVW5 TIMELESS-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25295.25295.3 14.07 14.07 4.036 4 1 1 0 772.0447 2234.1471 T233t TMT10 218 (K) LLSNSQTLGNDMLMNtPR (A) LLS(0.0)NS(0.0)QT(0.0)LGNDMLMNT(0.99)PR t:Phosphorylated T TIPIN 34668.8 1 2 5826.1 16 HUMAN 1 1.1919 -10.0556 GNDPLTSSPGRSSRR-p P49736;S27-p GNDPLTSSPGRSSRR 0.549780068218602 0.116793277977743 0.107666666666667 -0.306666666666667 4.79292829070445 12.2990089842724 0.107666666666667 -0.306666666666667 0.331670748544994 0.0588978038805855 1.06597082951871 -2.38426080170464 P49736 MCM2 P49736.S27.p_MCM2 P49736_T25tS26sS27s_3_3_25_27 P49736 P49736|F8WDM3 DNA replication licensing factor MCM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9245.9245.3 9.59 5.97 99 3 3 3 0 575.904 1485.7971 T25t S26s S27s TMT10 19 (R) RGNDPLtssPGR (S) RGNDPLT(1.0)S(1.0)S(1.0)PGR t:Phosphorylated T,s:Phosphorylated S MCM2 102579 2 14 259.1 397.63 HUMAN 1 4.7929 -12.299 GNEKRQSSPSPSRDR-p Q15464;S363-p GNEKRQSSPSPSRDR 0.285207992770294 0.0956449226255385 0.29 0.378333333333333 10.2827608880627 13.4795722670247 0.29 0.378333333333333 0.0936966171322184 0.0448789588664924 2.03088135570716 2.59636524054714 Q15464 SHB Q15464.S363.p_SHB Q15464_S363s _1_1_363_363 Q15464 Q15464 SH2 domain-containing adapter protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.2853.2853.3 9.47 2.57 1.115 4 1 1 0 437.5521 1230.6752 S363s TMT10 360 (K) RQSsPSPSR (D) RQS(0.0)S(0.99)PS(0.0)PS(0.0)R s:Phosphorylated S SHB 55783 2 4 1825.1 112.53 HUMAN 1 10.2828 13.4796 GNEQAEESPERYLHL-p E7ESJ3;S505-p GNEQAEESPERYLHL 0.148266672319898 0.360774276137856 -0.292333333333333 -0.184666666666667 16.7539683850919 5.87517429946584 -0.292333333333333 -0.184666666666667 0.0211155871190911 0.258513108599676 -3.2143325697467 -1.26200045393085 E7ESJ3 NotFound E7ESJ3.S505.p_NotFound E7ESJ3_S505s _1_1_505_505 E7ESJ3 E7ESJ3 Ankyrin repeat domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21206.21206.5 16.33 16.33 6.231 3 1 1 0 719.5788 3513.8979 S505s TMT10 496 (K) NIGNEQAEEsPERYLHLKPTIEMK (D) NIGNEQAEES(0.99)PERY(0.0)LHLKPT(0.0)IEMK K:TMT10,s:Phosphorylated S ANKRD26 199524.4 2 4 812.1 221.02 HUMAN 1 -16.754 -5.8752 GNFGFGDSRGGGGNF-p P22626;S212-p GNFGFGDSRGGGGNF 0.746527005315183 0.242370631905385 -0.0716666666666667 0.113666666666667 2.40995426641859 8.10855219086314 -0.0716666666666667 0.113666666666667 0.574122507999135 0.154576966746433 -0.597790129552527 1.65345483284312 P22626 HNRNPA2B1 P22626.S212.p_HNRNPA2B1 P22626_S212s _1_1_212_212 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16266.16266.3 18.5 18.5 13.798 2 1 1 0 818.0124 2372.0551 S212s Hydrogen 204 (R) GGNFGFGDsRGGGGNFGPGPGSNFR (G) GGNFGFGDS(0.99)RGGGGNFGPGPGS(0.0)NFR s:Phosphorylated S HNRNPA2B1 37486.1 12 9 299.1 378.08 HUMAN 1 -2.41 8.1086 GNFGGRSSGPYGGGG-p P09651-2;S286-p GNFGGRSSGPYGGGG 0.692791685962321 0.979944150390792 -0.168333333333333 -0.00966666666666664 2.99064311531357 0.125561523011653 -0.168333333333333 -0.00966666666666667 0.502268206746069 0.971502332623474 -0.718511168632802 -0.0374028067401888 P09651 HNRNPA1 P09651.2.S286.p_HNRNPA1 P09651-2_S286s _1_1_286_286 P09651-2 P09651|P09651-2|Q32P51|F8W6I7|P09651-3 Isoform A1-A of Heterogeneous nuclear ribonucleoprotein A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16293.16293.2 11.23 11.23 1.15 4 1 1 0 957.464 1833.9536 S286s TMT10 285 (R) SsGPYGGGGQYFAK (P) S(0.0)S(0.99)GPY(0.0)GGGGQY(0.0)FAK K:TMT10,s:Phosphorylated S HNRNPA1 34309.7 1 11 504.1 289.99 HUMAN 1 -2.9906 -0.1256 GNFNPFASPQKNRQS-p Q9H6K1;S215-p GNFNPFASPQKNRQS 0.210966553981742 0.00179618067818409 -0.226333333333333 -1.07733333333333 13.0451873441553 43.2524904967394 -0.226333333333333 -1.07733333333333 0.0495999530712105 4.72880004339302e-05 -2.51921263769212 -11.6956625961098 Q9H6K1 C6orf106 Q9H6K1.S215.p_C6orf106 Q9H6K1_S215s _1_1_215_215 Q9H6K1 Q9H6K1|Q9H6K1-2|Q5TH58 Uncharacterized protein C6orf106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19397.19397.3 19.16 15.03 99 1 1 1 0 777.4222 2250.285 S215s TMT10 205 (R) KVEGNFNPFAsPQK (N) KVEGNFNPFAS(1.0)PQK K:TMT10,s:Phosphorylated S C6orf106 33156.3 9 1 2462.1 82.34 HUMAN 1 -13.0452 -43.2525 GNGGSSLSYTNPAVA-p P15941-4;S1230-p GNGGSSLSYTNPAVA 0.294929222562145 0.934488500334619 0.171666666666667 -0.00833333333333328 10.0023434431495 0.415587774669096 0.171666666666667 -0.00833333333333329 0.0999460547830439 0.90874330131587 1.98211759284685 -0.120080789440343 P15941 MUC1 P15941.4.S1230.p_MUC1 P15941-4_S1230s_1_1_1230_1230 P15941-4 A0A087WWM1|P15941|P15941-3|P15941-4|A0A087X2A4|A0A0C4DGW3|P15941-8|P15941-11|P15941-7|A0A0A0MRB3|A0A087X0L2|P15941-6|P15941-16|P15941-12|P15941-2|B1AVQ7|P15941-15|A6ZIE3|P15941-10|A6ZIE4|P15941-9 Isoform 4 of Mucin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25472.25747.3 16.21 16.21 1.418 8 1 1 0 840.3999 2438.2361 N1224n S1230s TMT10 1220 (K) VSAGnGGSSLsYTNPAVAATSANL (-) VS(0.0)AGN(0.99)GGS(0.0)S(0.0)LS(0.99)Y(0.0)T(0.0)N(0.0)PAVAAT(0.0)S(0.0)AN(0.0)L n:Deamidated,s:Phosphorylated S MUC1 121190 7 4 3420.1 51.62 HUMAN 1 10.0023 -0.4156 GNGHEHCSDCENEED-p P30419;S31-p GNGHEHCSDCENEED 0.317067114607464 0.226378535570552 0.147 0.125333333333333 9.34142182157166 8.49635509133309 0.147 0.125333333333333 0.116374497262586 0.14137235443721 1.86748238642193 1.72059400394929 P30419 NMT1 P30419.S31.p_NMT1 P30419_S31s_1_1_31_31 P30419 P30419|B7Z8J4 Glycylpeptide N-tetradecanoyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19389.19808.5 19.65 19.65 0.641 5 1 1 0 1013.8192 4984.0988 N23n S31s Acetyl 2 (M) ADESETAVKPPAPPLPQMMEGnGNGHEHCsDCENEEDNSYNR (G) ADES(0.0)ET(0.0)AVKPPAPPLPQMMEGN(0.50)GN(0.50)GHEHCS(0.99)DCEN(0.0)EEDN(0.0)S(0.0)Y(0.0)N(0.0)R K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S NMT1 57147.5 28 1 1576.1 130.17 HUMAN 1 9.3414 8.4964 GNGKGFLSMQSLASH-p O15049;S130-p GNGKGFLSMQSLASH 0.744690566487893 0.899835315667745 0.0576666666666667 -0.016 2.42839121902572 0.641034203179896 0.0576666666666667 -0.016 0.571690371866179 0.86277306762915 0.601712959085493 -0.181224791984443 O15049 N4BP3 O15049.S130.p_N4BP3 O15049_S130s _1_1_130_130 O15049 O15049 NEDD4-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22116.22116.3 11.25 11.25 1.136 3 1 1 0 615.324 1763.9878 S130s TMT10 127 (K) GFLsMQSLASHK (G) GFLS(0.99)MQS(0.0)LAS(0.0)HK K:TMT10,s:Phosphorylated S N4BP3 60925.2 1 2 3606.1 47.21 HUMAN 1 2.4284 -0.641 GNGLRAVTPLRPGEL-p Q9H7B4;T22-p GNGLRAVTPLRPGEL 0.739863824708031 0.150656674378913 0.058 0.210333333333333 2.48120406014711 10.8118747671617 0.058 0.210333333333333 0.564780370517179 0.0829492613938582 0.612914843121769 2.1222450413183 Q9H7B4 SMYD3 Q9H7B4.T22.p_SMYD3 Q9H7B4_T22t _1_1_22_22 Q9H7B4 Q9H7B4|B0QZ88 Histone-lysine N-methyltransferase SMYD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24506.24506.3 11.9 8.79 99 1 1 1 0 593.3351 1698.0264 T22t TMT10 20 (R) AVtPLRPGELLFR (S) AVT(1.0)PLRPGELLFR t:Phosphorylated T SMYD3 50408.6 2 1 6389.1 11.9 HUMAN 1 2.4812 10.8119 GNIDGNVSCSENLVA-p Q92576;S1630-p GNIDGNVSCSENLVA 0.367103810267829 0.106181275288054 -0.202 0.170666666666667 8.0795471698071 12.8687324913232 -0.202 0.170666666666667 0.1556127877496 0.0516567109791232 -1.6489571696291 2.48609232668611 Q92576 PHF3 Q92576.S1630.p_PHF3 Q92576_S1630s _1_1_1630_1630 Q92576 Q92576|Q92576-2 PHD finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16285.16285.3 14.29 14.29 1.861 3 1 1 0 767.3578 2220.0876 S1630s TMT10 1623 (K) GNIDGNVsCSENLVANTAR (S) GNIDGNVS(0.99)CS(0.0)ENLVANT(0.0)AR C:Carbamidomethylation,s:Phosphorylated S PHF3 231702.4 3 12 96.1 606.54 HUMAN 1 -8.0795 12.8687 GNIKVTKSPQKSTVL-p Q9NVP1;S86-p GNIKVTKSPQKSTVL 0.0495990523839634 0.0016237919479163 0.458666666666667 -0.997666666666667 28.8580177581508 44.5341202604701 0.458666666666667 -0.997666666666667 0.00130076314735326 3.52036726506667e-05 6.09205840178653 -12.3715979469067 Q9NVP1 DDX18 Q9NVP1.S86.p_DDX18 Q9NVP1_S86s _1_1_86_86 Q9NVP1 Q9NVP1 ATP-dependent RNA helicase DDX18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7251.7251.2 9.55 3.27 2.087 2 1 1 0 777.965 1474.956 S86s TMT10 83 (K) VTKsPQK (S) VT(0.0)KS(0.99)PQK K:TMT10,s:Phosphorylated S DDX18 75747.7 4 2 2977.1 64.23 HUMAN 1 28.858 -44.5341 GNKADLASKRAVEFQ-p P51148-2;S173-p GNKADLASKRAVEFQ 0.241515863682301 0.177883509941185 -0.340666666666667 0.204 11.7988244865107 9.86399547008945 -0.340666666666667 0.204 0.066087230341828 0.10318117114987 -2.29670169517672 1.95731181304114 P51148 RAB5C P51148.2.S173.p_RAB5C P51148-2_S173s _1_1_173_173 P51148-2 P51148-2 Isoform 2 of Ras-related protein Rab-5C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27354.27354.4 15.24 16.4 12.955 2 1 1 0 687.897 2668.5965 S173s TMT10 155 (R) QASPNIVIALAGNKADLAsK (R) QAS(0.0)PNIVIALAGNKADLAS(0.99)K K:TMT10,s:Phosphorylated S RAB5C 27263.3 1 5 2563.1 78.41 HUMAN 1 -11.7988 9.864 GNKLQTLSPSHKGIA-p Q96GY0;S223-p GNKLQTLSPSHKGIA 0.425033318045053 0.0474557203885791 -0.214666666666667 -0.442333333333333 6.8465200611629 17.7055509117994 -0.214666666666667 -0.442333333333333 0.206703577826601 0.0169607443795879 -1.43411970400788 -3.40019130075094 Q96GY0 ZC2HC1A Q96GY0.S223.p_ZC2HC1A Q96GY0_S223s _1_1_223_223 Q96GY0 Q96GY0 Zinc finger C2HC domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12196.12196.3 11.29 11.29 3.011 3 1 1 0 516.956 1468.8888 S223s TMT10 219 (K) LQTLsPSHK (G) LQT(0.0)LS(0.99)PS(0.0)HK K:TMT10,s:Phosphorylated S ZC2HC1A 35776.2 1 1 4657.1 28.3 HUMAN 1 -6.8465 -17.7056 GNKMLNYSAPSAGGC-p Q07352;S27-p GNKMLNYSAPSAGGC 0.0332552830156115 0.0467536667111663 -0.724333333333333 -0.275 34.5293972376942 17.7936045372639 -0.724333333333333 -0.275 0.000352419780394914 0.0166203263159841 -7.93768183610957 -3.41785690423292 Q07352 ZFP36L1 Q07352.S27.p_ZFP36L1 Q07352_S27s _1_1_27_27 Q07352 Q07352 mRNA decay activator protein ZFP36L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20922.20922.3 9.73 9.73 9.734 3 1 1 0 797.7386 2311.2303 S27s TMT10 23 (K) MLNYsAPSAGGCLLDRK (A) MLNY(0.0)S(0.99)APS(0.0)AGGCLLDRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZFP36L1 36769.3 1 7 1672.2 122.01 HUMAN 1 -34.5294 -17.7936 GNKPSSYS_______-p Q9UNS2;S423-p GNKPSSYS_______ 0.481533495886899 0.52006101930439 0.0996666666666667 0.0923333333333334 5.84105555597846 3.81515904096855 0.0996666666666667 0.0923333333333334 0.260552019940545 0.41541683817589 1.25619672742661 0.881483698566323 Q9UNS2 COPS3 Q9UNS2.S423.p_COPS3 Q9UNS2_S423s _1_1_423_423 Q9UNS2 Q9UNS2|Q9UNS2-2|H7C3P9 COP9 signalosome complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8570.8570.2 14.37 14.37 5.18 7 1 1 0 1157.5014 2234.0283 S423s TMT10 407 (K) SMGSQEDDSGNKPSSYs (-) S(0.0)MGS(0.0)QEDDS(0.0)GNKPS(0.0)S(0.0)Y(0.0)S(0.99) K:TMT10,s:Phosphorylated S COPS3 48442.8 3 3 4666.1 28.21 HUMAN 1 5.8411 3.8152 GNKVQNGSVHQKDGL-p Q9Y5A9;S22-p GNKVQNGSVHQKDGL 0.259441883712572 0.52906403601265 -0.411 0.0683333333333333 11.118723306631 3.71759386623026 -0.411 0.0683333333333333 0.0772907763020268 0.42485488228266 -2.17692181371194 0.862608555883162 Q9Y5A9 YTHDF2 Q9Y5A9.S22.p_YTHDF2 Q9Y5A9_S22s_1_1_22_22 Q9Y5A9 Q9Y5A9 YTH domain-containing family protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5186.5186.3 7.78 7.78 99 1 1 1 0 512.6046 1454.848 N20n S22s TMT10 18 (K) VQnGsVHQK (D) VQN(1.0)GS(1.0)VHQK K:TMT10,n:Deamidated,s:Phosphorylated S YTHDF2 62504.2 1 16 1868.3 109.97 HUMAN 1 -11.1187 3.7176 GNLALAASAAAVDAG-p A0A0U1RRM4;S198-p GNLALAASAAAVDAG 0.761322954381134 0.11713196014171 0.0503333333333333 0.256333333333333 2.27216844829452 12.2805629577135 0.0503333333333333 0.256333333333333 0.592629348685414 0.0591484957492823 0.568266305727321 2.38097892855327 A0A0U1RRM4 NotFound A0A0U1RRM4.S198.p_NotFound A0A0U1RRM4_S198s _1_1_198_198 A0A0U1RRM4 A0A0U1RRM4|P26599-3|P26599-2|A6NLN1 Polypyrimidine tract-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34301.34301.4 16.34 16.34 1.508 4 1 1 0 998.2615 3910.0476 S198s TMT10 178 (R) AQAALQAVNSVQSGNLALAAsAAAVDAGMAMAGQSPVLR (I) AQAALQAVNS(0.0)VQS(0.0)GNLALAAS(0.99)AAAVDAGMAMAGQS(0.0)PVLR s:Phosphorylated S PTBP1 62691.3 1 5 1244.1 162.7 HUMAN 1 2.2722 12.2806 GNLAVMDSPQQICER-p Q16401;S285-p GNLAVMDSPQQICER 0.407878856431238 0.0191953216310716 0.125 0.463333333333333 7.18911048955975 23.6018860818906 0.125 0.463333333333334 0.191024446970773 0.00436326300507359 1.49407709610246 4.69273696784536 Q16401 PSMD5 Q16401.S285.p_PSMD5 Q16401_S285s_1_1_285_285 Q16401 Q16401|Q16401-2 26S proteasome non-ATPase regulatory subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.34131.34131.4 14.39 14.39 13.634 2 1 1 0 857.6846 3346.7368 N279n S285s TMT10 276 (K) FFGnLAVMDsPQQICERYPIFVEK (V) FFGN(1.0)LAVMDS(0.99)PQQICERY(0.0)PIFVEK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S PSMD5 56594.1 1 3 3275.1 55.24 HUMAN 1 7.1891 23.6019 GNLFSFPSYSQKSED-p Q02880;S1452-p GNLFSFPSYSQKSED 0.686568545489346 0.0254220667681766 -0.0766666666666667 0.355666666666667 3.06512011784244 21.7015993493789 -0.0766666666666667 0.355666666666667 0.493728262447856 0.00675834044342719 -0.733608174039118 4.24960879125335 Q02880 TOP2B Q02880.S1452.p_TOP2B Q02880_S1452s _1_1_1452_1452 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30463.30463.3 17.31 17.31 2.243 5 1 1 0 797.3885 2310.1807 S1452s TMT10 1441 (K) SQDFGNLFSFPsYSQK (S) S(0.0)QDFGNLFS(0.0)FPS(0.99)Y(0.0)S(0.0)QK K:TMT10,s:Phosphorylated S TOP2B 184233.7 4 38 71.1 658.36 HUMAN 1 -3.0651 21.7016 GNLHESDSESVPRDF-p Q86UP2;S77-p GNLHESDSESVPRDF 0.884694109365589 0.847816730076972 0.022 -0.0196666666666666 1.05107739903498 1.00637408212837 0.022 -0.0196666666666666 0.785040857282839 0.793163264893684 0.28664203410945 -0.275449381767938 Q86UP2 KTN1 Q86UP2.S77.p_KTN1 Q86UP2_S75sS77s_2_2_75_77 Q86UP2 Q86UP2|Q86UP2-4|Q86UP2-3|Q86UP2-2 Kinectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10305.10691.3 15.71 15.71 1.191 3 2 2 0 767.3296 2140.0468 S75s S77s TMT10 66 (K) EIQNGNLHEsDsESVPR (D) EIQNGNLHES(0.99)DS(0.99)ES(0.0)VPR s:Phosphorylated S KTN1 156557.7 26 15 186.1 473.59 HUMAN 1 1.0511 -1.0064 GNLHRTSSVPEYVYN-p Q99959;S82-p GNLHRTSSVPEYVYN 0.153714082796245 0.211983976313256 0.233666666666667 0.123666666666667 16.3416963228384 8.86301341435606 0.233666666666667 0.123666666666667 0.0232182972932077 0.129926774969179 3.13407755477396 1.78401898990896 Q99959 PKP2 Q99959.S82.p_PKP2 Q99959_S82s _1_1_82_82 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27876.27876.3 8.11 8.11 8.105 5 1 1 0 859.0695 2495.2201 S82s Hydrogen 80 (R) TSsVPEYVYNLHLVENDFVGGR (S) T(0.0)S(0.0)S(0.99)VPEY(0.0)VY(0.0)NLHLVENDFVGGR s:Phosphorylated S PKP2 97926.6 9 3 257.1 399.17 HUMAN 1 16.3417 8.863 GNLKRYPTPYPDELK-p Q96RT1-8;T485-p GNLKRYPTPYPDELK 0.125105447257903 0.0115841932008813 0.332666666666667 0.451333333333333 18.7761027305559 27.0845085403255 0.332666666666667 0.451333333333333 0.0132553050547544 0.00195681219369833 3.62107233054302 5.58410175906954 Q96RT1 ERBB2IP Q96RT1.8.T485.p_ERBB2IP Q96RT1-8_T485t _1_1_485_485 Q96RT1-8 Q96RT1-8|Q96RT1-2 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14919.14919.2 9.06 9.06 2.334 3 1 1 0 959.002 1837.026 T485t TMT10 482 (K) RYPtPYPDELK (N) RY(0.0)PT(0.99)PY(0.0)PDELK K:TMT10,t:Phosphorylated T ERBIN 159762.8 1 5 81.1 633.5 HUMAN 1 18.7761 27.0845 GNLLHFPSSQGEEEK-p Q12888-2;S1072-p GNLLHFPSSQGEEEK 0.255122222613923 0.00508122719502233 -0.202666666666667 0.586 11.2844753235766 33.4071564327667 -0.202666666666667 0.586 0.0743964936783609 0.00045633560642799 -2.2060240250202 7.52583027445907 Q12888 TP53BP1 Q12888.2.S1072.p_TP53BP1 Q12888-2_S1072sS1073s_2_2_1072_1073 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21159.21159.3 12.56 12.56 99 2 2 2 0 764.0235 2130.1232 S1072s S1073s TMT10 1065 (R) GNLLHFPssQGEEEK (E) GNLLHFPS(1.0)S(1.0)QGEEEK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 1 100 3.1 2297.07 HUMAN 1 -11.2845 33.4072 GNMALKHTPLKTLPF-p P10243;T479-p GNMALKHTPLKTLPF 0.0846108990025632 0.00735208480306389 0.337333333333333 -0.530666666666667 22.9566564267366 30.5177746081029 0.337333333333333 -0.530666666666667 0.00506214239373542 0.000887610720949201 4.54418844178254 -6.58054925876228 P10243 MYBL1 P10243.T479.p_MYBL1 P10243_T479t_1_1_479_479 P10243 P10243|P10243-2|E7EWZ1 Myb-related protein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13836.13836.4 11.82 11.82 3.25 2 1 1 0 659.8536 2555.4219 N473n T479t TMT10 465 (R) DGSLNDGGnMALKHtPLK (T) DGS(0.0)LN(0.0)DGGN(0.99)MALKHT(0.99)PLK K:TMT10,n:Deamidated,t:Phosphorylated T MYBL1 86513 1 5 1622.1 126.88 HUMAN 1 22.9567 -30.5178 GNMERITSPVLMGEE-p Q9NZN5;S190-p GNMERITSPVLMGEE 0.267039324895012 0.718403680528923 -0.297 0.078 10.8674813558395 1.97785530324802 -0.297 0.078 0.0818939585653604 0.634182815405532 -2.13290899519026 0.503834074843271 Q9NZN5 ARHGEF12 Q9NZN5.S190.p_ARHGEF12 Q9NZN5_S190s _1_1_190_190 Q9NZN5 Q9NZN5|Q9NZN5-2|E9PMR6 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18875.18875.3 18.46 17.35 1.137 2 1 1 0 849.7722 2467.3379 S190s TMT10 188 (R) ITsPVLMGEENNVVHNQK (V) IT(0.0)S(0.99)PVLMGEENNVVHNQK K:TMT10,s:Phosphorylated S ARHGEF12 174199.1 3 3 251.1 406.16 HUMAN 1 -10.8675 1.9779 GNMSRGNSLFFRKVP-p Q9Y6C9;S283-p GNMSRGNSLFFRKVP 0.830680447880338 0.276094581445414 0.0336666666666667 0.149 1.55016694421229 7.36563300389735 0.0336666666666667 0.149 0.699815094365235 0.18341578108174 0.406706467796397 1.52443220036686 Q9Y6C9 MTCH2 Q9Y6C9.S283.p_MTCH2 Q9Y6C9_S283s _1_1_283_283 Q9Y6C9 Q9Y6C9 Mitochondrial carrier homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19128.19128.2 10.09 10.09 99 1 1 1 0 575.2867 1069.5992 S283s TMT10 281 (R) GNsLFFR (K) GNS(1.0)LFFR s:Phosphorylated S MTCH2 33957.9 2 5 3112.1 60.36 HUMAN 1 1.5502 7.3656 GNMTVVDSPGQEVLN-p Q8WUA4;S25-p GNMTVVDSPGQEVLN 0.452192101778898 0.0214937545520178 0.102666666666667 0.331 6.35820073812592 22.8022945064021 0.102666666666667 0.331 0.231302286633271 0.00524530262154199 1.34813251406811 4.50285775480619 Q8WUA4 GTF3C2 Q8WUA4.S25.p_GTF3C2 Q8WUA4_S25s_1_1_25_25 Q8WUA4 Q8WUA4|Q8WUA4-2|A0A087WZD8 General transcription factor 3C polypeptide 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.36767.36767.3 14.35 14.35 1.149 4 1 1 0 1401.9979 4090.9973 M1m N19n M20m S25s Acetyl 1 (-) mDTCGVGYVALGEAGPVGnmTVVDsPGQEVLNQLDVK (T) M(1.0)DT(0.0)CGVGY(0.0)VALGEAGPVGN(0.99)M(1.0)T(0.0)VVDS(0.99)PGQEVLN(0.0)QLDVK C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,n:Deamidated,s:Phosphorylated S GTF3C2 101761.7 11 1 753.1 231.45 HUMAN 1 6.3582 22.8023 GNNFLSGSPASPMGD-p Q14980;S200-p GNNFLSGSPASPMGD 0.473939665716417 0.772997641235629 0.115333333333333 0.03 5.97143223800625 1.5473532329261 0.115333333333333 0.03 0.252846400946178 0.700268638150172 1.27947278496697 0.406007594413785 Q14980 NUMA1 Q14980.S200.p_NUMA1 Q14980_S200sS203s_2_2_200_203 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-3|Q14980-4|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.33851.34055.3 23.63 21.91 1.155 8 2 2 0 1200.8771 3440.6776 S200s S203s TMT10 187 (K) VASSSSGNNFLSGsPAsPMGDILQTPQFQMR (R) VAS(0.0)S(0.0)S(0.0)S(0.0)GNNFLS(0.0)GS(0.99)PAS(0.99)PMGDILQT(0.0)PQFQMR s:Phosphorylated S NUMA1 239339.3 5 40 31.1 900.97 HUMAN 1 5.9714 1.5474 GNNPGRMSPGETASF-p Q9P212;S1709-p GNNPGRMSPGETASF 0.616312626410794 0.232919094154321 -0.0833333333333333 0.139 3.89963693613183 8.33304437536933 -0.0833333333333333 0.139 0.407414335626197 0.146789693093942 -0.897895871356403 1.69233112357088 Q9P212 PLCE1 Q9P212.S1709.p_PLCE1 Q9P212_S1709s _1_1_1709_1709 Q9P212 Q9P212|Q9P212-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19563.19563.5 13.14 13.14 2.781 4 1 1 0 530.6645 2569.3233 S1709s TMT10 1699 (K) SIFGNNPGRMsPGETASFNK (T) S(0.0)IFGNNPGRMS(0.99)PGET(0.0)AS(0.0)FNK K:TMT10,s:Phosphorylated S PLCE1 261905 7 7 1584.1 129.49 HUMAN 1 -3.8996 8.333 GNPAVLRSPSLLRSR-p A0A1B0GV68;S778-p GNPAVLRSPSLLRSR 0.898002110206447 0.022328704096571 0.029 0.465 0.916112475546378 22.5534556601744 0.029 0.465 0.809820473957818 0.00555462102876634 0.252701702272453 4.44479764141322 A0A1B0GV68 NotFound A0A1B0GV68.S778.p_NotFound A0A1B0GV68_S778s _1_1_778_778 A0A1B0GV68 A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.35704.35704.5 26.45 20.49 1.141 13 1 1 0 1122.5645 5528.809 S778s TMT10 732 (R) GMAGQLAPLQVTEGSTSSGTESSESDSEMLIPGSQPLIFGNPAVLRsPSLLR (S) GMAGQLAPLQVT(0.0)EGS(0.0)T(0.0)S(0.0)S(0.0)GT(0.0)ES(0.0)S(0.0)ES(0.0)DS(0.0)EMLIPGS(0.0)QPLIFGNPAVLRS(0.99)PS(0.0)LLR s:Phosphorylated S FARP1 88555.5 2 21 147.1 514.5 HUMAN 1 0.9161 22.5535 GNPIRAYTPPPPLGP-p J3QS41;T1164-p GNPIRAYTPPPPLGP 0.721277042307597 0.408135666121711 -0.0503333333333333 -0.104333333333333 2.6816389748699 5.18122650274123 -0.0503333333333333 -0.104333333333333 0.53930705614286 0.303303449579067 -0.654973061554741 -1.13693055199064 J3QS41 HELZ J3QS41.T1164.p_HELZ J3QS41_T1164t _1_1_1164_1164 J3QS41 J3QS41|P42694 Probable helicase with zinc finger domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18490.18490.3 23.13 23.13 4.905 2 1 1 0 732.0656 2114.2163 T1164t TMT10 1162 (R) AYtPPPPLGPHPNLGK (S) AY(0.0)T(0.99)PPPPLGPHPNLGK K:TMT10,t:Phosphorylated T HELZ 220821.8 11 7 466.1 303.39 HUMAN 1 -2.6816 -5.1812 GNPLLKHYRGPAGDA-p Q15758;Y524-p GNPLLKHYRGPAGDA 0.153441400704023 0.983447809367037 -0.369333333333333 -0.00299999999999996 16.3601883616502 0.105979905026681 -0.369333333333333 -0.00299999999999997 0.0231196451377025 0.975892565512413 -3.13765931866081 -0.0316381998882713 Q15758 SLC1A5 Q15758.Y524.p_SLC1A5 Q15758_Y524y _1_1_524_524 Q15758 Q15758|M0QXM4|Q15758-2|Q15758-3 Neutral amino acid transporter B(0) GG20160819_MSz_CCLE_T4D7_pY_Injection_01.7542.7542.3 7.15 7.15 7.149 3 1 1 0 699.6878 2017.0867 Y524y TMT10 523 (K) HyRGPAGDATVASEK (E) HY(0.99)RGPAGDAT(0.0)VAS(0.0)EK K:TMT10,y:Phosphorylated Y SLC1A5 57053.7 1 1 445.1 7.15 HUMAN 1 -16.3602 -0.106 GNPLLNLTGPSQPQA-p Q9P013;T173-p GNPLLNLTGPSQPQA 0.811509711130931 0.61206424621838 0.0353333333333333 0.0523333333333334 1.7437063251081 2.89728300087023 0.0353333333333333 0.0523333333333334 0.669313165126755 0.513182336699892 0.451264972938041 0.699374719837561 Q9P013 CWC15 Q9P013.T173.p_CWC15 Q9P013_T173t _1_1_173_173 Q9P013 Q9P013 Spliceosome-associated protein CWC15 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.34858.34858.3 17.4 15.83 2.187 3 1 1 0 1041.2123 3041.6494 T173t TMT10 160 (R) MENILSGNPLLNLtGPSQPQANFK (V) MENILS(0.0)GNPLLNLT(0.99)GPS(0.0)QPQANFK K:TMT10,t:Phosphorylated T CWC15 26680.9 5 2 4923.1 25.03 HUMAN 1 1.7437 2.8973 GNPTKRQSQLIDTLQ-p Q9BZF9;S1353-p GNPTKRQSQLIDTLQ 0.0326602777666666 0.0959899512192452 -0.686333333333333 -0.182 34.8116376775446 13.4589868371659 -0.686333333333333 -0.182 0.000330244985739846 0.0450921887552242 -8.04060485228054 -2.59262925081616 Q9BZF9 UACA Q9BZF9.S1353.p_UACA Q9BZF9_S1353s _1_1_1353_1353 Q9BZF9 Q9BZF9|Q9BZF9-2|H0YNH8|F5H2B9 Uveal autoantigen with coiled-coil domains and ankyrin repeats HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17182.17182.3 12.84 12.84 2.94 2 1 1 0 744.7452 2152.2603 S1353s TMT10 1351 (K) RQsQLIDTLQHQVK (S) RQS(0.99)QLIDT(0.0)LQHQVK K:TMT10,s:Phosphorylated S UACA 163643.6 2 2 4542.1 30.09 HUMAN 1 -34.8116 -13.459 GNRDENQSINHQMAQ-p P20073;S336-p GNRDENQSINHQMAQ 0.608639070325984 0.0157592260547454 0.117333333333333 0.460333333333333 3.99342592321384 24.9159897528928 0.117333333333333 0.460333333333333 0.398710256497252 0.00322404447898936 0.915872764990778 5.01629741948588 P20073 ANXA7 P20073.S336.p_ANXA7 P20073_S336s _1_1_336_336 P20073 P20073|P20073-2 Annexin A7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15087.15087.4 15.81 15.81 4.681 2 1 1 0 871.1506 3401.5946 S336s TMT10 322 (R) LLVSMCQGNRDENQsINHQMAQEDAQR (L) LLVS(0.0)MCQGNRDENQS(0.99)INHQMAQEDAQR C:Carbamidomethylation,s:Phosphorylated S ANXA7 53023.6 1 1 5857.1 15.81 HUMAN 1 3.9934 24.916 GNRGGCGSPGLQCKG-p Q86YV5;S907-p GNRGGCGSPGLQCKG 0.618803324936163 0.592138578308192 -0.0706666666666667 -0.120333333333333 3.87328117379751 3.07934275903831 -0.0706666666666667 -0.120333333333333 0.409894303370627 0.492114004278771 -0.892828379698738 -0.73637721001142 Q86YV5 SGK223 Q86YV5.S907.p_SGK223 Q86YV5_S907s _1_1_907_907 Q86YV5 Q86YV5 Tyrosine-protein kinase PRAG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8319.8319.2 12.89 8.73 99 1 1 1 0 829.8932 1578.8133 S907s TMT10 903 (R) GGCGsPGLQCK (G) GGCGS(1.0)PGLQCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRAG1 152359.5 3 22 223.1 426.19 HUMAN 1 -3.8733 -3.0793 GNRKAVKSPQRSSSK-p Q6IQ19;S169-p GNRKAVKSPQRSSSK 0.0675246153589399 0.0710794174189239 0.412666666666667 -0.231333333333333 25.2602193106824 15.2665295693994 0.412666666666667 -0.231333333333333 0.00297836602365497 0.029740416277409 5.10998567941227 -2.92663857874566 Q6IQ19 CCSAP Q6IQ19.S169.p_CCSAP Q6IQ19_S169s _1_1_169_169 Q6IQ19 Q6IQ19|Q6IQ19-2 Centriole, cilia and spindle-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.4259.4259.3 8.14 3.18 99 1 1 1 0 441.9232 1243.7887 S169s TMT10 166 (K) AVKsPQR (S) AVKS(1.0)PQR K:TMT10,s:Phosphorylated S CCSAP 30444 2 4 2959.1 64.73 HUMAN 1 25.2602 -15.2665 GNRLANNSDCILAKD-p Q9BX63;S1162-p GNRLANNSDCILAKD 0.615350842498504 0.00520869187654939 -0.0666666666666667 -0.6 3.91202691712581 33.207752587941 -0.0666666666666667 -0.6 0.406253680260468 0.000477776452202422 -0.900275706085327 -7.45714233650819 Q9BX63 BRIP1 Q9BX63.S1162.p_BRIP1 Q9BX63_S1162s _1_1_1162_1162 Q9BX63 Q9BX63 Fanconi anemia group J protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19034.19034.2 13.66 8.51 99 1 1 1 0 878.9553 1676.9406 S1162s TMT10 1158 (R) LANNsDCILAK (D) LANNS(1.0)DCILAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRIP1 142871.9 2 11 837.1 214.97 HUMAN 1 -3.912 -33.2078 GNRNRNLSGGVLMGF-p A0A0U1RR27;S1079-p GNRNRNLSGGVLMGF 0.365498843349433 0.216463538428816 0.136333333333333 -0.161 8.11307909715974 8.74297656477494 0.136333333333333 -0.161 0.154415926046674 0.13356797554139 1.65477129833191 -1.76325725292526 A0A0U1RR27 NotFound A0A0U1RR27.S1079.p_NotFound A0A0U1RR27_S1079s _1_1_1079_1079 A0A0U1RR27 A0A0U1RR27|Q7Z401-2 C-myc promoter-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.34675.34675.3 18 18 99 1 1 1 0 606.6381 1737.9341 S1079s TMT10 1077 (R) NLsGGVLMGFMLNR (I) NLS(1.0)GGVLMGFMLNR s:Phosphorylated S DENND4A 217514.7 2 7 399.1 328.24 HUMAN 1 8.1131 -8.743 GNSMPRGSGSGFKPF-p Q9NWH9;S1019-p GNSMPRGSGSGFKPF 0.917317225988856 0.531389300291025 0.0176666666666667 0.081 0.731319831611218 3.69113505858315 0.0176666666666667 0.081 0.845022001870061 0.42745115424384 0.205054974620499 0.857472139595777 Q9NWH9 SLTM Q9NWH9.S1019.p_SLTM Q9NWH9_S1019s _1_1_1019_1019 Q9NWH9 Q9NWH9|Q9NWH9-3 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13859.13859.3 7.76 7.76 1.133 2 1 1 0 517.2775 1469.8517 S1019s Hydrogen 1018 (R) GsGSGFKPFK (G) GS(0.99)GS(0.0)GFKPFK K:TMT10-Lys-Only,s:Phosphorylated S SLTM 117431.6 1 21 167.1 494.15 HUMAN 1 0.7313 3.6911 GNSSRRGSGDTSSLI-p Q9Y608;S328-p GNSSRRGSGDTSSLI 0.939062815043773 0.0698089000725109 0.0133333333333333 0.214666666666667 0.533882722168685 15.37433340495 0.0133333333333333 0.214666666666667 0.884324643709085 0.0290112645604933 0.152490710723381 2.94697483655144 Q9Y608 LRRFIP2 Q9Y608.S328.p_LRRFIP2 Q9Y608_S328s _1_1_328_328 Q9Y608 Q9Y608|Q9Y608-4 Leucine-rich repeat flightless-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31674.31674.5 23.37 17.14 1.186 8 1 1 0 887.2487 4352.2258 S328s TMT10 326 (R) RGsGDTSSLIDPDTSLSELRDIYDLKDQIQDVEGR (Y) RGS(0.99)GDT(0.0)S(0.0)S(0.0)LIDPDT(0.0)S(0.0)LS(0.0)ELRDIY(0.0)DLKDQIQDVEGR K:TMT10,s:Phosphorylated S LRRFIP2 82398.2 13 4 1556.1 131.81 HUMAN 1 0.5339 15.3743 GNSVQKISEPEAEIS-p Q96RT1-8;S562-p GNSVQKISEPEAEIS 0.55094283213948 0.765573896197239 0.146333333333333 0.0476666666666667 4.77806501303581 1.60305789851083 0.146333333333333 0.0476666666666667 0.332807801854562 0.691344019237057 1.06322585820102 0.418939204122443 Q96RT1 ERBB2IP Q96RT1.8.S562.p_ERBB2IP Q96RT1-8_S562s _1_1_562_562 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5|Q96RT1-4|Q96RT1-6|Q96RT1-7 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27157.27157.4 10.52 10.52 1.218 6 1 1 0 965.2529 3778.0374 S562s TMT10 552 (K) YMIGNSVQKIsEPEAEISPGSLPVTANMK (A) Y(0.0)MIGNS(0.0)VQKIS(0.99)EPEAEIS(0.0)PGS(0.0)LPVT(0.0)ANMK K:TMT10,s:Phosphorylated S ERBIN 159762.8 1 6 81.1 633.5 HUMAN 1 4.7781 1.6031 GNSYGRSSPLLNYNT-p Q5T0W9;S976-p GNSYGRSSPLLNYNT 0.148266672319898 0.82761651313122 0.246 -0.0243333333333333 16.7677607869383 1.15049845164408 0.246 -0.0243333333333333 0.0210486342311478 0.7672734222408 3.21703218111789 -0.311183393332391 Q5T0W9 FAM83B Q5T0W9.S976.p_FAM83B Q5T0W9_S976s _1_1_976_976 Q5T0W9 Q5T0W9 Protein FAM83B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17136.17136.3 10.13 5.07 1.411 9 1 1 0 939.7793 2737.3565 S976s TMT10 965 (K) SATMGNSYGRSsPLLNYNTGVYR (S) S(0.0)AT(0.0)MGNS(0.0)Y(0.0)GRS(0.0)S(0.99)PLLNY(0.0)NT(0.0)GVY(0.0)R s:Phosphorylated S FAM83B 115253.5 3 19 249.1 407.75 HUMAN 1 16.7678 -1.1505 GNTADASSEEEGDRV-p Q9Y3E1;S122-p GNTADASSEEEGDRV 0.197649293626488 0.00383473386221413 -0.323333333333333 0.618333333333333 13.724133109538 35.7721273134673 -0.323333333333333 0.618333333333333 0.0424215652682019 0.000264720313609582 -2.64240708331189 8.38284967952529 Q9Y3E1 HDGFRP3 Q9Y3E1.S122.p_HDGFRP3 Q9Y3E1_S121sS122s_2_2_121_122 Q9Y3E1 Q9Y3E1 Hepatoma-derived growth factor-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17534.17534.4 17.84 17.84 1.377 9 2 2 0 1186.2581 4581.0661 N116n S121s S122s TMT10 96 (K) FTGYQAIQQQSSSETEGEGGnTADAssEEEGDRVEEDGK (G) FT(0.0)GY(0.0)QAIQQQS(0.0)S(0.0)S(0.0)ET(0.0)EGEGGN(1.0)T(0.0)ADAS(0.99)S(0.99)EEEGDRVEEDGK K:TMT10,n:Deamidated,s:Phosphorylated S HDGFL3 22676.4 5 3 2167.1 94.71 HUMAN 1 -13.7241 35.7721 GNTREALSPCPSTVS-p Q08AD1;S673-p GNTREALSPCPSTVS 0.952442048084725 0.00387979257248964 -0.0143333333333333 -0.635666666666667 0.418125415066549 35.6183493362195 -0.0143333333333333 -0.635666666666666 0.908212465625398 0.000274261638579283 -0.120794499179194 -8.3246581233836 Q08AD1 CAMSAP2 Q08AD1.S673.p_CAMSAP2 Q08AD1_S673s _1_1_673_673 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13238.13238.2 15.22 15.22 1.506 5 1 1 0 957.9869 1834.9985 S673s TMT10 670 (R) EALsPCPSTVSTK (S) EALS(0.99)PCPS(0.0)T(0.0)VS(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CAMSAP2 169284 3 8 28.2 931.95 HUMAN 1 -0.4181 -35.6183 GNVLGPKSVARIAKL-p P62424;S246-p GNVLGPKSVARIAKL 0.122554525096102 0.172578235421836 0.271 -0.146 18.9866109325573 10.0302171047044 0.271 -0.146 0.0126281260067017 0.0993066403586386 3.66476216262799 -1.98615478006557 P62424 RPL7A P62424.S246.p_RPL7A P62424_S246s _1_1_246_246 P62424 P62424|Q5T8U2 60S ribosomal protein L7a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13165.13165.3 8.63 8.63 99 1 1 1 0 672.7009 1936.1281 S246s TMT10 236 (R) HWGGNVLGPKsVAR (I) HWGGNVLGPKS(1.0)VAR K:TMT10,s:Phosphorylated S RPL7A 30166.2 1 1 6932.1 8.63 HUMAN 1 18.9866 -10.0302 GNVPAPDSTKGSLKQ-p Q08378;S268-p GNVPAPDSTKGSLKQ 0.163282134509363 0.200624238943548 0.261333333333333 -0.153333333333333 15.76803146472 9.17853751612282 0.261333333333333 -0.153333333333333 0.0264970090167467 0.120822063413046 3.02377552942157 -1.83859728722102 Q08378 GOLGA3 Q08378.S268.p_GOLGA3 Q08378_S268s _1_1_268_268 Q08378 Q08378|Q08378-2|Q08378-4 Golgin subfamily A member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14179.14179.4 15.17 15.17 1.423 8 1 1 0 944.7247 3695.908 S268s TMT10 245 (R) SLADYRTEDSNAGNSGGNVPAPDsTKGSLK (Q) S(0.0)LADY(0.0)RT(0.0)EDS(0.0)NAGNS(0.0)GGNVPAPDS(0.99)T(0.0)KGS(0.0)LK K:TMT10,s:Phosphorylated S GOLGA3 167865.2 2 4 515.1 286.2 HUMAN 1 15.768 -9.1785 GNVPVMPSLDELNPK-p Q9P0V3;S180-p GNVPVMPSLDELNPK 0.455840880261612 0.667480797182091 0.139333333333333 0.0743333333333333 6.29185845097013 2.40263639332542 0.139333333333333 0.0743333333333334 0.234862757132127 0.575090721380866 1.33639367997856 0.59615668898011 Q9P0V3 SH3BP4 Q9P0V3.S180.p_SH3BP4 Q9P0V3_S180s_1_1_180_180 Q9P0V3 Q9P0V3|Q9P0V3-2 SH3 domain-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37191.37191.4 25.4 21.97 0.632 4 1 1 0 1069.024 4192.1036 N168n S180s TMT10 155 (R) MYSNNPFWNGVQTnPFLNGNVPVMPsLDELNPK (S) MY(0.0)S(0.0)N(0.0)N(0.0)PFWN(0.0)GVQT(0.0)N(0.50)PFLN(0.0)GN(0.50)VPVMPS(0.99)LDELN(0.0)PK K:TMT10,n:Deamidated,s:Phosphorylated S SH3BP4 108463.7 1 7 782.1 225.91 HUMAN 1 6.2919 2.4026 GNVSEGESPPDSQED-p S5FZ81;S331-p GNVSEGESPPDSQED 0.327394528659194 0.0443529996173569 0.143 0.248333333333333 9.07212700947554 18.1155447725098 0.143 0.248333333333333 0.123819001954689 0.0154328282409056 1.82084928146936 3.48281276703304 S5FZ81 NotFound S5FZ81.S331.p_NotFound S5FZ81_S327sS331s_2_2_327_331 S5FZ81 Q8WUB8-3|S5FZ81 PHD finger protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10022.10022.3 23.03 23.03 5.059 9 2 2 0 1044.7413 2972.2827 S327s S331s TMT10 317 (K) GTSDSSSGNVsEGEsPPDSQEDSFQGR (Q) GT(0.0)S(0.0)DS(0.0)S(0.0)S(0.0)GNVS(0.99)EGES(0.99)PPDS(0.0)QEDS(0.0)FQGR s:Phosphorylated S PHF10 42782.4 2 12 1372.1 149.1 HUMAN 1 9.0721 18.1155 GNWDTSGSELSEGEL-p O75400;S935-p GNWDTSGSELSEGEL 0.825130077485234 0.729964847560934 0.036 -0.0564999999999999 1.61034425454355 1.88300393612312 0.036 -0.0565 0.690185092398799 0.648185940006145 0.420669887113041 -0.482678799004843 O75400 PRPF40A O75400.S935.p_PRPF40A O75400_S935sS938s_2_2_935_938 O75400 O75400|O75400-3|O75400-2 Pre-mRNA-processing factor 40 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21102.21515.3 17.47 17.47 1.122 5 2 2 0 886.7133 2498.1935 S935s S938s TMT10 926 (K) DSGNWDTSGsELsEGELEK (R) DS(0.0)GNWDT(0.0)S(0.0)GS(0.99)ELS(0.99)EGELEK K:TMT10,s:Phosphorylated S PRPF40A 109088.4 17 13 718.2 237.38 HUMAN 2 1.6103 -1.883 GNWKIIRSENFEELL-p P29373;S13-p GNWKIIRSENFEELL 0.273144866471374 0.354915527560434 -0.171333333333333 0.108 10.6731361594658 5.96574542345555 -0.171333333333333 0.108 0.085641917812159 0.253177704353631 -2.09893923573132 1.27815655678593 P29373 CRABP2 P29373.S13.p_CRABP2 P29373_S13s _1_1_13_13 P29373 P29373 Cellular retinoic acid-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26322.26322.3 12.07 6.05 99 1 1 1 0 677.0425 1949.1472 S13s TMT10 10 (K) IIRsENFEELLK (V) IIRS(1.0)ENFEELLK K:TMT10,s:Phosphorylated S CRABP2 15863.9 1 1 4870.1 25.61 HUMAN 1 -10.6731 5.9657 GNYGPGGSGGSGGYG-p P22626;S341-p GNYGPGGSGGSGGYG 0.867015593379486 0.233391825078796 0.0273333333333333 0.136 1.2072987830745 8.32122774383958 0.0273333333333333 0.136 0.757303774992875 0.147189634077326 0.3250982222017 1.69028559627519 P22626 HNRNPA2B1 P22626.S341.p_HNRNPA2B1 P22626_S341sS344s_2_2_341_344 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14226.14226.3 17.6 17.6 2.643 5 2 2 0 860.3384 2419.0683 S341s S344s TMT10 326 (R) NMGGPYGGGNYGPGGsGGsGGYGGR (S) NMGGPY(0.0)GGGNY(0.0)GPGGS(0.99)GGS(0.99)GGY(0.0)GGR s:Phosphorylated S HNRNPA2B1 37486.1 2 18 299.1 378.08 HUMAN 1 1.2073 8.3212 GNYNQQPSNYGPMKS-p P22626;S311-p GNYNQQPSNYGPMKS 0.608670397110072 0.370423427989926 -0.158666666666667 0.178 3.99244824302609 5.72137433748846 -0.158666666666667 0.178 0.398800023928096 0.267832062836447 -0.915685814176526 1.23448439683798 P22626 HNRNPA2B1 P22626.S311.p_HNRNPA2B1 P22626_S311s_1_1_311_311 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21627.21627.4 21.96 21.96 0 11 1 1 0 1406.0929 5540.3636 N307n S311s TMT10 267 (R) GGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYnQQPsNYGPMK (S) GGY(0.0)GGGGPGY(0.0)GN(0.0)QGGGY(0.0)GGGY(0.0)DN(0.17)Y(0.0)GGGN(0.17)Y(0.0)GS(0.0)GN(0.17)Y(0.0)N(0.17)DFGN(0.17)Y(0.0)N(0.17)QQPS(0.99)N(0.0)Y(0.0)GPMK K:TMT10,n:Deamidated,s:Phosphorylated S HNRNPA2B1 37486.1 1 15 299.1 378.08 HUMAN 1 -3.9924 5.7214 GPAERTPSEIQFHQV-p Q12851;S328-p GPAERTPSEIQFHQV 0.965977621411301 0.266488361814102 0.009 -0.132333333333333 0.290451303881248 7.56212336979848 0.009 -0.132333333333333 0.935308475059069 0.175302319722902 0.0850121777346731 -1.55862875858726 Q12851 MAP4K2 Q12851.S328.p_MAP4K2 Q12851_S328s _1_1_328_328 Q12851 Q12851|Q12851-2 Mitogen-activated protein kinase kinase kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11035.11035.3 12.37 12.37 1.872 2 1 1 0 541.6096 1542.8478 S328s Hydrogen 326 (R) TPsEIQFHQVK (F) T(0.0)PS(0.99)EIQFHQVK K:TMT10-Lys-Only,s:Phosphorylated S MAP4K2 92524.2 6 3 1581.1 129.87 HUMAN 1 0.2905 -7.5621 GPAFNMASPESDFGI-p Q09666;S5552-p GPAFNMASPESDFGI 0.426515655420314 0.0191413813059483 -0.111 -0.39 6.81734194941394 23.6260504743185 -0.111 -0.39 0.208096993169465 0.00433905297654919 -1.42900046296297 -4.69855567807937 Q09666 AHNAK Q09666.S5552.p_AHNAK Q09666_S5552s _1_1_5552_5552 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28823.28823.4 25.46 23.27 2.773 4 1 1 0 1054.2848 4134.1573 S5552s TMT10 5529 (K) GSEVGFHGAAPDISVKGPAFNMAsPESDFGINLK (G) GS(0.0)EVGFHGAAPDIS(0.0)VKGPAFNMAS(0.99)PES(0.0)DFGINLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 12 145 1.1 4313.36 HUMAN 1 -6.8173 -23.6261 GPAIPGDTPPPTPRS-p O75145;T714-p GPAIPGDTPPPTPRS 0.272131207932286 0.0325934090013893 0.186666666666667 -0.280666666666667 10.7089240045366 20.064346531606 0.186666666666667 -0.280666666666667 0.0849390891602895 0.00985292885378852 2.10518993942332 -3.88911928877831 O75145 PPFIA3 O75145.T714.p_PPFIA3 O75145_T714t _1_1_714_714 O75145 O75145|O75145-2 Liprin-alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9725.9725.5 18.61 18.61 4.841 2 1 1 0 691.5596 3373.8017 T714t TMT10 692 (K) ANHVPKEEAGAPRGEGPAIPGDtPPPTPR (S) ANHVPKEEAGAPRGEGPAIPGDT(0.99)PPPT(0.0)PR K:TMT10,t:Phosphorylated T PPFIA3 134064.6 11 13 248.2 410.18 HUMAN 1 10.7089 -20.0643 GPAKSQGSGNEAEPL-p Q9NUQ6-3;S485-p GPAKSQGSGNEAEPL 0.765144944930961 0.0653649511257129 -0.0616666666666667 -0.230666666666667 2.23255724249587 15.7634160018968 -0.0616666666666667 -0.230666666666667 0.598059337968173 0.0265251836708488 -0.559709051885084 -3.02079885756762 Q9NUQ6 SPATS2L Q9NUQ6.3.S485.p_SPATS2L Q9NUQ6-3_S485s _1_1_485_485 Q9NUQ6-3 Q9NUQ6-3|Q9NUQ6-4|B8ZZZ7|Q9NUQ6-2 Isoform 3 of SPATS2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10714.10714.2 11.69 7.1 3.297 2 1 1 0 906.4486 1731.9277 S485s TMT10 482 (K) SQGsGNEAEPLGK (G) S(0.0)QGS(0.99)GNEAEPLGK K:TMT10,s:Phosphorylated S SPATS2L 65721.3 1 5 3039.1 62.45 HUMAN 1 -2.2326 -15.7634 GPALGLPSPEAESGV-p Q53F19;S25-p GPALGLPSPEAESGV 0.313089580774833 0.922334228743076 0.142 0.0113333333333333 9.43643267787342 0.494057352206679 0.141294495435464 0.0113333333333333 0.113856212390305 0.892471311852563 1.88394264030851 0.141649441712084 Q53F19 NCBP3 Q53F19.S25.p_NCBP3 Q53F19_S25s _1_1_25_25 Q53F19 Q53F19 Nuclear cap-binding protein subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29803.29803.4 30.08 28.51 5.475 2 1 1 0 1130.5532 4439.2126 S25s TMT10 13 (K) AEAPAGPALGLPsPEAESGVDRGEPEPMEVEEGELEIVPVR (R) AEAPAGPALGLPS(0.99)PEAES(0.0)GVDRGEPEPMEVEEGELEIVPVR s:Phosphorylated S NCBP3 70705.4 9 1 1350.1 150.87 HUMAN 1 9.4364 0.4941 GPALRYGSRDDLVAG-p Q9ULC8;S606-p GPALRYGSRDDLVAG 0.283719734356722 0.355398454099787 0.180666666666667 0.118666666666667 10.333627857762 5.95908004988022 0.180666666666667 0.118666666666667 0.09260559238907 0.253566569440541 2.03973733578946 1.27696874775739 Q9ULC8 ZDHHC8 Q9ULC8.S606.p_ZDHHC8 Q9ULC8_S606s _1_1_606_606 Q9ULC8 Q9ULC8-3|Q9ULC8-2 Probable palmitoyltransferase ZDHHC8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15148.15148.3 9.98 9.98 9.981 2 1 1 0 668.6572 1923.9874 S606s TMT10 604 (R) YGsRDDLVAGPGFGGAR (N) Y(0.0)GS(0.99)RDDLVAGPGFGGAR s:Phosphorylated S ZDHHC8 82297 1 34 134.2 530.74 HUMAN 1 10.3336 5.9591 GPAMTPPSPKRGPAI-p E9PAV3;S1388-p GPAMTPPSPKRGPAI 0.985019744458763 0.0538762018845878 0.00333333333333333 -0.229333333333333 0.13238470617833 16.9125287726137 0.00333333333333333 -0.229333333333333 0.96997720758225 0.020358563115904 0.039409308689186 -3.24297115521572 E9PAV3 NACA E9PAV3.S1388.p_NACA E9PAV3_S1388s _1_1_1388_1388 E9PAV3 E9PAV3 Nascent polypeptide-associated complex subunit alpha, muscle-specific form HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12240.12240.2 11.13 11.13 1.199 2 1 1 0 789.4087 1497.85 S1388s TMT10 1380 (K) GGPAMTPPsPK (R) GGPAMT(0.0)PPS(0.99)PK K:TMT10,s:Phosphorylated S NACA 206102.3 2 8 533.1 279.72 HUMAN 1 0.1324 -16.9125 GPAPRKKTQEKDDDM-p O60784-2;T482-p GPAPRKKTQEKDDDM 0.104209357384164 0.0520896383681692 -0.330333333333333 0.267 20.7221632840679 17.1244653824224 -0.330333333333333 0.267 0.00846805502914809 0.0193889129925896 -4.03567714494812 3.28466383609954 O60784 TOM1 O60784.2.T482.p_TOM1 O60784-2_T482t _1_1_482_482 O60784-2 O60784-2|O60784-4 Isoform 2 of Target of Myb protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23081.23081.4 13.21 13.21 99 1 1 1 0 670.3709 2598.4983 T482t TMT10 480 (R) KKtQEKDDDMLFAL (-) KKT(1.0)QEKDDDMLFAL K:TMT10,t:Phosphorylated T TOM1 54158.9 1 7 1385.1 148 HUMAN 1 -20.7222 17.1245 GPASVPPSPDKQRMP-p Q14686;S1091-p GPASVPPSPDKQRMP 0.633706957274332 0.0151952380790259 0.0766666666666667 -0.388 3.68855128211325 25.1526092699415 0.0766666666666667 -0.388 0.427705536208355 0.00305308624768143 0.857107174277752 -5.07614600230578 Q14686 NCOA6 Q14686.S1091.p_NCOA6 Q14686_S1091s _1_1_1091_1091 Q14686 Q14686 Nuclear receptor coactivator 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28029.28232.4 17.49 13.23 3.256 5 1 1 0 823.1677 3209.6773 S1091s TMT10 1068 (R) MPMQQSGSVPVMVSLQGPASVPPsPDK (Q) MPMQQS(0.0)GS(0.0)VPVMVS(0.0)LQGPAS(0.0)VPPS(0.99)PDK K:TMT10,s:Phosphorylated S NCOA6 219484.1 7 2 327.1 360.02 HUMAN 1 3.6886 -25.1526 GPATVNNSSDTESIP-p Q9Y618;S745-p GPATVNNSSDTESIP 0.491091158286831 0.400440334834717 -0.0913333333333333 0.093 5.68692107694273 5.28534894210102 -0.0913333333333333 0.093 0.269965266816217 0.296118203407469 -1.22858386535241 1.15585706215877 Q9Y618 NCOR2 Q9Y618.S745.p_NCOR2 Q9Y618_S745sS746sS753s_3_3_745_753 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14170.14170.4 13.58 13.58 0 8 3 3 0 861.3655 3201.537 N744n S745s S746s S753s TMT10 734 (R) GECSGPATVNnssDTESIPsPHTEAAK (D) GECS(0.0)GPAT(0.0)VN(0.50)N(0.50)S(0.99)S(0.99)DT(0.0)ES(0.0)IPS(0.99)PHT(0.0)EAAK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S NCOR2 275540.8 2 50 16.1 1053.89 HUMAN 1 -5.6869 5.2853 GPCPEDGSDAPLEDS-p O15085-2;S1545-p GPCPEDGSDAPLEDS 0.708550077823572 0.0197123423703082 -0.100333333333333 0.512 2.81196541255043 23.4044405494386 -0.100333333333333 0.512 0.523363533265905 0.0045662106754166 -0.681954548217199 4.64537146796964 O15085 ARHGEF11 O15085.2.S1545.p_ARHGEF11 O15085-2_S1545s _1_1_1545_1545 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16965.16965.3 19.65 17.19 1.655 5 1 1 0 1091.7963 3193.4065 S1545s TMT10 1533 (R) NSHELGPCPEDGsDAPLEDSTADAAASPGP (-) NS(0.0)HELGPCPEDGS(0.99)DAPLEDS(0.0)T(0.0)ADAAAS(0.0)PGP C:Carbamidomethylation,s:Phosphorylated S ARHGEF11 173153.4 1 21 228.1 424.05 HUMAN 1 -2.812 23.4044 GPCPSQESLSQEENP-p Q86W50;S453-p GPCPSQESLSQEENP 0.431086362849781 0.0205675845082698 0.132666666666667 0.396 6.72765769271766 23.0826237397655 0.132666666666667 0.396 0.212438991342819 0.00491742365475093 1.41325175904836 4.56884595963469 Q86W50 METTL16 Q86W50.S453.p_METTL16 Q86W50_S450sS453s_2_2_450_453 Q86W50 Q86W50 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12380.12380.4 16.44 16.44 1.108 5 2 2 0 1034.1801 3973.7566 S450s S453s Hydrogen 438 (R) EGEAAAVEGPCPsQEsLSQEENPEPTEDERSEEK (G) EGEAAAVEGPCPS(0.99)QES(0.99)LS(0.0)QEENPEPT(0.0)EDERS(0.0)EEK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S METTL16 64418.6 3 8 1049.1 183.96 HUMAN 1 6.7277 23.0826 GPCSQRSSPDGGLKG-p P48634;S1671-p GPCSQRSSPDGGLKG 0.200797395490016 0.0393853459220035 -0.247333333333333 -0.333333333333333 13.5501605262495 18.8458458251586 -0.247333333333333 -0.333333333333333 0.0441554126091874 0.0130441389828339 -2.61069158510519 -3.63236598080078 P48634 PRRC2A P48634.S1671.p_PRRC2A P48634_S1671s _1_1_1671_1671 P48634 P48634|P48634-3|P48634-2|P48634-4 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8900.8900.2 10.38 5.12 1.396 2 1 1 0 649.8412 1218.7094 S1671s TMT10 1670 (R) SsPDGGLK (G) S(0.0)S(0.99)PDGGLK K:TMT10,s:Phosphorylated S PRRC2A 229315.4 2 31 36.1 882.05 HUMAN 1 -13.5502 -18.8458 GPDGEDYSPWADRKA-p I3L4C2;S344-p GPDGEDYSPWADRKA 0.685362519428199 0.0104414023033067 0.0596666666666667 -0.507333333333333 3.07813756452301 27.8017885888629 0.0596666666666667 -0.507333333333333 0.492250587962128 0.00165890356753012 0.736238721061013 -5.78191732384706 I3L4C2 BAIAP2 I3L4C2.S344.p_BAIAP2 I3L4C2_S344s _1_1_344_344 I3L4C2 I3L4C2|Q9UQB8|Q9UQB8-2|Q9UQB8-6|Q9UQB8-4|Q9UQB8-5|Q9UQB8-3|B4DWA1 Brain-specific angiogenesis inhibitor 1-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21998.21998.4 21.75 21.75 1.197 6 1 1 0 895.1654 3497.6717 S344s TMT10 323 (R) MSAQESTPIMNGVTGPDGEDYsPWADRK (A) MS(0.0)AQES(0.0)T(0.0)PIMNGVT(0.0)GPDGEDY(0.0)S(0.99)PWADRK K:TMT10,s:Phosphorylated S BAIAP2 61608.4 12 8 386.1 333.05 HUMAN 1 3.0781 -27.8018 GPDGNINSPTRNADM-p Q7Z3K3;S1338-p GPDGNINSPTRNADM 0.981612148640369 0.197108841855211 0.00499999999999999 0.128666666666667 0.159752672119418 9.27997701792719 0.00362818556895798 0.128666666666667 0.963883914622489 0.118032688171004 0.0474141508135401 1.85614913774894 Q7Z3K3 POGZ Q7Z3K3.S1338.p_POGZ Q7Z3K3_S1338s _1_1_1338_1338 Q7Z3K3 Q7Z3K3|Q7Z3K3-6|Q7Z3K3-3|Q7Z3K3-2|Q7Z3K3-7|Q7Z3K3-5 Pogo transposable element with ZNF domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29301.29301.3 22.91 22.08 1.356 4 1 1 0 784.0707 2270.2342 S1338s TMT10 1322 (R) SFLVASVLPGPDGNINsPTR (N) S(0.0)FLVAS(0.0)VLPGPDGNINS(0.99)PT(0.0)R s:Phosphorylated S POGZ 157451.9 14 12 811.1 221.02 HUMAN 1 0.1598 9.28 GPEATVVSDEDEAAE-p P51178-2;S481-p GPEATVVSDEDEAAE 0.346575581458127 0.126512232474824 0.158666666666667 0.191333333333333 8.55296095096995 11.8373681859688 0.158666666666667 0.191333333333333 0.139541666369376 0.0655033002227955 1.73097669827301 2.30239053372651 P51178 PLCD1 P51178.2.S481.p_PLCD1 P51178-2_S481s _1_1_481_481 P51178-2 P51178|P51178-2 Isoform 2 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25770.26420.4 32.1 33.11 2.198 2 1 1 0 991.4807 3882.9319 S481s TMT10 462 (K) KLGGLLPPGGEGGPEATVVsDEDEAAEMEDEAVR (S) KLGGLLPPGGEGGPEAT(0.0)VVS(0.99)DEDEAAEMEDEAVR K:TMT10,s:Phosphorylated S PLCD1 88932.1 15 3 1846.1 111.27 HUMAN 1 8.553 11.8374 GPEEEGDSAAITEDE-p J3KNN3;S397-p GPEEEGDSAAITEDE 0.80410604882838 0.164095458513903 0.0456666666666667 0.345666666666667 1.8260053693865 10.3203636516776 0.0456666666666667 0.345666666666667 0.656749064847014 0.09288886040643 0.469915349700165 2.03657420738554 J3KNN3 NotFound J3KNN3.S397.p_NotFound J3KNN3_S397s _1_1_397_397 J3KNN3 J3KNN3|P15735 Phosphorylase b kinase gamma catalytic chain, liver/testis isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.35874.35874.4 13.23 13.23 1.614 2 1 1 0 1018.2432 3990.0156 S397s TMT10 375 (R) AALFQHRPPGPFPIMGPEEEGDsAAITEDEAVLVLG (-) AALFQHRPPGPFPIMGPEEEGDS(0.99)AAIT(0.0)EDEAVLVLG s:Phosphorylated S PHKG2 47285.3 1 4 3238.1 56.2 HUMAN 1 1.826 10.3204 GPEEPGDSPPLRHRP-p Q12770;S851-p GPEEPGDSPPLRHRP 0.834918238854484 0.0385389764152398 0.0553333333333333 0.354 1.51199936857529 18.9946823291336 0.0553333333333333 0.354 0.705992460538548 0.0126046783323222 0.397797284156099 3.66323263097538 Q12770 SCAP Q12770.S851.p_SCAP Q12770_S851s _1_1_851_851 Q12770 Q12770|Q12770-2|A0A0A0MTG6|Q12770-4 Sterol regulatory element-binding protein cleavage-activating protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11294.11294.2 12.69 12.69 99 1 1 1 0 815.8871 1550.8012 S851s TMT10 843 (K) AGPEEPGDsPPLR (H) AGPEEPGDS(1.0)PPLR s:Phosphorylated S SCAP 141666.3 4 4 1353.1 150.81 HUMAN 1 1.512 18.9947 GPEGKWKSPKFKMPE-p Q09666;S2820-p GPEGKWKSPKFKMPE 0.519956341576425 0.0299932771246821 -0.103 -0.949 5.2461197116795 20.6115941891572 -0.103 -0.949 0.298805115890007 0.00868641513635606 -1.14897558352168 -4.00755457708111 Q09666 AHNAK Q09666.S2820.p_AHNAK Q09666_S2820s _1_1_2820_2820 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21766.21766.5 20.54 20.54 20.535 2 1 1 0 899.0812 4411.4192 S2820s TMT10 2793 (K) ADIDVSGPKVDVECPDVNIEGPEGKWKsPK (F) ADIDVS(0.0)GPKVDVECPDVNIEGPEGKWKS(0.99)PK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S AHNAK 629603.7 3 74 1.1 4313.36 HUMAN 1 -5.2461 -20.6116 GPEGLEVSFRGRCLR-p E9PN81;S62-p GPEGLEVSFRGRCLR 0.190209416769307 0.00203605351766751 -0.347 -1.076 14.1015991541896 41.9628837153896 -0.347 -1.076 0.0388901917605694 6.36372829026901e-05 -2.71159139507732 -11.0504638311548 E9PN81 NotFound E9PN81.S62.p_NotFound E9PN81_S62s _1_1_62_62 E9PN81 E9PN81|Q8TDP1 Ribonuclease H2 subunit C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14109.14109.3 13.89 13.89 99 1 1 1 0 580.9607 1660.8968 S62s TMT10 54 (R) QGPEGLEVsFRGR (C) QGPEGLEVS(1.0)FRGR s:Phosphorylated S RNASEH2C 26587.6 1 2 5058.1 23.44 HUMAN 1 -14.1016 -41.9629 GPELVHVSEKNLSEI-p Q12959-2;S138-p GPELVHVSEKNLSEI 0.453195332145344 0.191021453737244 0.107333333333333 0.144333333333333 6.34097504294569 9.45473119435881 0.107333333333333 0.144333333333333 0.232221537275915 0.113377501069565 1.3450859693764 1.88639689143753 Q12959 DLG1 Q12959.2.S138.p_DLG1 Q12959-2_S138s _1_1_138_138 Q12959-2 Q12959-2|Q12959-7|Q12959-4|A0A0C4DFT3 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21403.21403.5 29.95 26.43 4.572 6 1 1 0 878.0388 4306.2032 S138s TMT10 108 (K) YRYQDEDTPPQEHISPQITNEVIGPELVHVsEK (N) Y(0.0)RY(0.0)QDEDT(0.0)PPQEHIS(0.0)PQIT(0.0)NEVIGPELVHVS(0.99)EK K:TMT10,s:Phosphorylated S DLG1 103604.4 11 10 196.1 460.79 HUMAN 1 6.341 9.4547 GPEPRTQSPGTDLLP-p Q2M3G4;S49-p GPEPRTQSPGTDLLP 0.883910399642057 0.159141651165446 -0.0226666666666667 -0.144666666666667 1.05814018207871 10.5019726497806 -0.0226666666666667 -0.144666666666667 0.783765209662593 0.0890846206594702 -0.288399363151425 -2.06818731154215 Q2M3G4 SHROOM1 Q2M3G4.S49.p_SHROOM1 Q2M3G4_S49s _1_1_49_49 Q2M3G4 Q2M3G4|Q2M3G4-2|A6NN40 Protein Shroom1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.35015.35015.3 14.78 14.78 1.107 5 1 1 0 816.7285 2368.2022 S49s TMT10 47 (R) TQsPGTDLLPYLDWDYVR (V) T(0.0)QS(0.99)PGT(0.0)DLLPY(0.0)LDWDY(0.0)VR s:Phosphorylated S SHROOM1 91583.2 3 1 1717.1 119.73 HUMAN 1 -1.0581 -10.502 GPEPRVDSPGRTEPC-p O15417;S1232-p GPEPRVDSPGRTEPC 0.386350387359242 0.0503111131003471 -0.300333333333333 0.519666666666667 7.64460699591942 17.3534788300225 -0.300333333333333 0.519666666666667 0.17200429852437 0.0183929807788418 -1.57344163137906 3.32997937875117 O15417 TNRC18 O15417.S1232.p_TNRC18 O15417_S1232s _1_1_1232_1232 O15417 O15417|H9KVB4|O15417-2|O15417-3 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30785.30785.3 18.22 18.22 1.144 5 1 1 0 1202.6202 3525.8875 S1232s TMT10 1230 (R) VDsPGRTEPCTAALDLGVQLTPETLVEAK (E) VDS(0.99)PGRT(0.0)EPCT(0.0)AALDLGVQLT(0.0)PET(0.0)LVEAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNRC18 316168 5 10 75.1 647.68 HUMAN 1 -7.6446 17.3535 GPERALNSALAEEIT-p Q6ZSY5;S547-p GPERALNSALAEEIT 0.384445956079301 0.734284906762387 0.179333333333333 0.036 7.68762942194467 1.84964972645712 0.179333333333333 0.036 0.170308787803843 0.653183232013235 1.58092112740445 0.475188629498486 Q6ZSY5 PPP1R3F Q6ZSY5.S547.p_PPP1R3F Q6ZSY5_S547s _1_1_547_547 Q6ZSY5 Q6ZSY5|Q6ZSY5-2 Protein phosphatase 1 regulatory subunit 3F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25468.25468.3 26.4 26.4 11.978 3 1 1 0 694.3594 2001.0967 S547s TMT10 544 (R) ALNsALAEEITLHYAR (L) ALNS(0.99)ALAEEIT(0.0)LHY(0.0)AR s:Phosphorylated S PPP1R3F 83423.7 2 1 4285.1 34.24 HUMAN 1 7.6876 1.8496 GPERAPLSPGRKGAA-p A0A1B0GW05;S46-p GPERAPLSPGRKGAA 0.314226185169244 0.00298089814036961 -0.147666666666667 -0.642333333333333 9.40696535829414 38.0061015367908 -0.147666666666667 -0.642333333333333 0.114631365070687 0.000158266809067737 -1.87883702758943 -9.26970912152754 A0A1B0GW05 NotFound A0A1B0GW05.S46.p_NotFound A0A1B0GW05_S46s _1_1_46_46 A0A1B0GW05 A0A1B0GW05 Probable C-mannosyltransferase DPY19L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9801.9801.4 13.01 7.51 4.192 2 1 1 0 661.5975 2563.3993 S46s TMT10 29 (R) GASDVGAGEPGPERAPLsPGRK (G) GAS(0.0)DVGAGEPGPERAPLS(0.99)PGRK K:TMT10,s:Phosphorylated S DPY19L1 85445.2 10 2 2514.1 80.37 HUMAN 1 -9.407 -38.0061 GPERGGETPEGLATS-p Q9ULL5-3;T738-p GPERGGETPEGLATS 0.769111039821672 0.0900444092069951 -0.046 0.208333333333333 2.18696713079569 13.8366405986848 -0.046 0.208333333333333 0.604370540545322 0.0413367130534921 -0.549820371365706 2.66140017281546 Q9ULL5 PRR12 Q9ULL5.3.T738.p_PRR12 Q9ULL5-3_T738t _1_1_738_738 Q9ULL5-3 Q9ULL5-3 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20691.20691.3 19.69 19.69 5.625 4 1 1 0 813.7493 2359.2658 T738t TMT10 735 (R) GGEtPEGLATSVVHYGAGAK (E) GGET(0.99)PEGLAT(0.0)S(0.0)VVHY(0.0)GAGAK K:TMT10,t:Phosphorylated T PRR12 212010 2 9 182.1 477.91 HUMAN 1 -2.187 13.8366 GPERLALSPEDKPIR-p O15417;S1127-p GPERLALSPEDKPIR 0.715634503364997 0.0465951277831623 -0.0536666666666667 0.354 2.74168558963228 17.8149707591885 -0.0536666666666667 0.354 0.531901776760386 0.0165387592019057 -0.6674389624365 3.42214991404176 O15417 TNRC18 O15417.S1127.p_TNRC18 O15417_S1127s _1_1_1127_1127 O15417 O15417|H9KVB4|O15417-2|O15417-3 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17467.17467.3 14.47 14.47 99 1 1 1 0 593.0062 1697.0362 S1127s TMT10 1124 (R) LALsPEDKPIR (L) LALS(1.0)PEDKPIR K:TMT10,s:Phosphorylated S TNRC18 316168 6 8 75.1 647.68 HUMAN 1 -2.7417 17.815 GPERRRFSASELMTR-p Q8IW93;S197-p GPERRRFSASELMTR 0.365498843349433 0.0232251310177084 -0.136333333333333 -0.408666666666667 8.11307909715974 22.3019090539556 -0.136333333333333 -0.408666666666667 0.154415926046674 0.0058858487074714 -1.65477129833191 -4.38659079190391 Q8IW93 ARHGEF19 Q8IW93.S197.p_ARHGEF19 Q8IW93_S197s _1_1_197_197 Q8IW93 Q8IW93|Q8IW93-2 Rho guanine nucleotide exchange factor 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15270.15270.3 11.95 11.95 2.355 3 1 1 0 502.9163 1426.7674 S197s TMT10 195 (R) RFsASELMTR (L) RFS(0.99)AS(0.0)ELMT(0.0)R s:Phosphorylated S ARHGEF19 90051.5 2 2 2080.1 98.61 HUMAN 1 -8.1131 -22.3019 GPESRYQTLPGRGLS-p E9PKC0;T1013-p GPESRYQTLPGRGLS 0.804218114164721 0.254431397695122 0.038 -0.124333333333333 1.82514313737472 7.83004911167058 0.038 -0.124333333333333 0.656879466292878 0.164814375358417 0.469720832647972 -1.60516675839424 E9PKC0 PLEKHA7 E9PKC0.T1013.p_PLEKHA7 E9PKC0_T1013t _1_1_1013_1013 E9PKC0 E9PKC0|Q6IQ23-2|Q6IQ23-3 Pleckstrin homology domain-containing family A member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8880.8880.2 8.91 1.15 5.549 2 1 1 0 572.2924 1063.6098 T1013t TMT10 1011 (R) YQtLPGR (G) Y(0.0)QT(0.99)LPGR t:Phosphorylated T PLEKHA7 144991.9 2 12 809.1 221.2 HUMAN 1 1.8251 -7.83 GPETPAISPSKRARP-p P33316;S99-p GPETPAISPSKRARP 0.660585362937783 0.779589791564573 0.0636666666666667 -0.0296666666666667 3.36952570545209 1.49696468222025 0.0636666666666667 -0.0296666666666667 0.460306841110228 0.708440746123601 0.794517773938629 -0.394234481578538 P33316 DUT P33316.S99.p_DUT P33316_S99s _1_1_99_99 P33316 P33316|H0YKI0 Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13967.13967.2 20.18 16.73 3.022 4 1 1 0 1080.0627 2079.1486 S99s TMT10 85 (K) AGGSPAPGPETPAIsPSK (R) AGGS(0.0)PAPGPET(0.0)PAIS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S DUT 26848 5 3 2301.1 89.12 HUMAN 1 3.3695 -1.497 GPFCTPQSPVSLAQE-p O14924;S1304-p GPFCTPQSPVSLAQE 0.201344466647756 0.102462626469132 -0.282333333333333 -0.195333333333333 13.5185460766047 13.0671956773472 -0.282333333333333 -0.195333333333333 0.0444780145258581 0.049349235856356 -2.60493947257251 -2.52179013517165 O14924 RGS12 O14924.S1304.p_RGS12 O14924_S1304s _1_1_1304_1304 O14924 O14924|O14924-4|O14924-3 Regulator of G-protein signaling 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30604.30604.4 14.24 11.93 1.107 6 1 1 0 803.6534 3131.6236 S1304s TMT10 1294 (K) SPSGPFCTPQsPVSLAQEGTAQIWK (R) S(0.0)PS(0.0)GPFCT(0.0)PQS(0.99)PVS(0.0)LAQEGT(0.0)AQIWK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RGS12 157895 1 7 2684.1 74.03 HUMAN 1 -13.5185 -13.0672 GPFPRVQSPPHLKSP-p Q9P202;S685-p GPFPRVQSPPHLKSP 0.589787738896889 0.195348572187119 -0.0856666666666667 0.138333333333333 4.22460665616016 9.32468687990034 -0.0856666666666667 0.138333333333333 0.378041375248322 0.116823795510795 -0.959827189362442 1.86388646574837 Q9P202 DFNB31 Q9P202.S685.p_DFNB31 Q9P202_S685s _1_1_685_685 Q9P202 Q9P202|A0A0C4DFT9|Q9P202-4 Whirlin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11313.11313.3 11.52 11.52 99 1 1 1 0 481.9423 1363.8462 S685s TMT10 683 (R) VQsPPHLK (S) VQS(1.0)PPHLK K:TMT10,s:Phosphorylated S WHRN 96812.2 2 2 5052.1 23.5 HUMAN 1 -4.2246 9.3247 GPGAARQSPRSALFR-p P51798;S48-p GPGAARQSPRSALFR 0.869521280017076 0.106778207784824 -0.0243333333333333 -0.172666666666667 1.18665834459145 12.8343664031128 -0.0243333333333333 -0.172666666666667 0.760911531014279 0.0520670964507382 -0.320065882107662 -2.47992307962121 P51798 CLCN7 P51798.S48.p_CLCN7 P51798_S48s _1_1_48_48 P51798 P51798 H(+)/Cl(-) exchange transporter 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6824.6824.3 13.26 7.52 6.051 3 1 1 0 780.3975 2259.2065 S48s Hydrogen 27 (R) TARPGGGTPLLNGAGPGAARQsPR (S) T(0.0)ARPGGGT(0.0)PLLNGAGPGAARQS(0.99)PR s:Phosphorylated S CLCN7 89191 8 3 2487.1 81.4 HUMAN 1 -1.1867 -12.8344 GPGFSSRSLTGCWSA-p Q6KB66;S45-p GPGFSSRSLTGCWSA 0.102471104147839 0.150957672199772 0.314666666666667 -0.179333333333333 20.9299476423758 10.7980322760392 0.314666666666667 -0.179333333333333 0.00807244762162287 0.0832140716333259 4.08143077097588 -2.1198271585684 Q6KB66 KRT80 Q6KB66.S45.p_KRT80 Q6KB66_S45s _1_1_45_45 Q6KB66 Q6KB66|Q6KB66-2 Keratin, type II cytoskeletal 80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21277.21277.2 16.1 16.1 3.306 5 1 1 0 953.4808 1825.9882 S45s TMT10 45 (R) sLTGCWSAGTISK (V) S(0.99)LT(0.0)GCWS(0.0)AGT(0.0)IS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KRT80 51037.9 2 53 69.3 672.47 HUMAN 1 20.9299 -10.798 GPGGARGSRKVADGL-p O75935;S30-p GPGGARGSRKVADGL 0.0533485827499771 0.0450606415184352 -0.594333333333333 -0.418333333333333 27.6492606812606 18.0167781750948 -0.594333333333333 -0.418333333333333 0.00171820085920782 0.0157878205894422 -5.74758816111185 -3.46282340609321 O75935 DCTN3 O75935.S30.p_DCTN3 O75935_S30s _1_1_30_30 O75935 O75935|O75935-2|X6RLR1|O75935-3|X6RA56 Dynactin subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10489.10489.4 10.19 10.19 6.381 2 1 1 0 483.0127 1849.0597 S30s TMT10 20 (R) WVYGPGGARGsRK (V) WVY(0.0)GPGGARGS(0.99)RK K:TMT10,s:Phosphorylated S DCTN3 21233.1 2 1 6679.1 10.19 HUMAN 1 -27.6493 -18.0168 GPGGSGGSGGYGGRS-p P22626;S344-p GPGGSGGSGGYGGRS 0.867015593379486 0.233391825078796 0.0273333333333333 0.136 1.2072987830745 8.32122774383958 0.0273333333333333 0.136 0.757303774992875 0.147189634077326 0.3250982222017 1.69028559627519 P22626 HNRNPA2B1 P22626.S344.p_HNRNPA2B1 P22626_S341sS344s_2_2_341_344 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14226.14226.3 17.6 17.6 2.643 5 2 2 0 860.3384 2419.0683 S341s S344s TMT10 326 (R) NMGGPYGGGNYGPGGsGGsGGYGGR (S) NMGGPY(0.0)GGGNY(0.0)GPGGS(0.99)GGS(0.99)GGY(0.0)GGR s:Phosphorylated S HNRNPA2B1 37486.1 2 18 299.1 378.08 HUMAN 1 1.2073 8.3212 GPGKGRLSGLGGPRK-p Q96IF1;S39-p GPGKGRLSGLGGPRK 0.0956171041021503 0.0195167621697027 0.347666666666667 -0.768333333333333 21.6204455636826 23.4713184610286 0.347666666666667 -0.768333333333334 0.00688581647803604 0.00449643328359374 4.23567037415319 -4.66137933945959 Q96IF1 AJUBA Q96IF1.S39.p_AJUBA Q96IF1_S39s _1_1_39_39 Q96IF1 Q96IF1 LIM domain-containing protein ajuba HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8525.8525.3 7.97 7.97 99 1 1 1 0 426.9014 1198.7218 S39s TMT10 36 (K) GRLsGLGGPR (K) GRLS(1.0)GLGGPR s:Phosphorylated S AJUBA 58758.7 1 1 1286.1 158.19 HUMAN 1 21.6204 -23.4713 GPGLAVQSGDKTKKP-p Q96PK6;S161-p GPGLAVQSGDKTKKP 0.0534951183479084 0.00840448513471 -0.498666666666667 -0.441666666666667 27.6205474387195 29.4858338212922 -0.498666666666667 -0.441666666666667 0.00172959832541298 0.00112568432300626 -5.73959145557279 -6.26748908176023 Q96PK6 RBM14 Q96PK6.S161.p_RBM14 Q96PK6_S161s _1_1_161_161 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11126.11126.3 15.73 13.47 99 1 1 1 0 642.0336 1844.1209 S161s TMT10 153 (K) KGPGLAVQsGDK (T) KGPGLAVQS(1.0)GDK K:TMT10,s:Phosphorylated S RBM14 69661.6 1 2 151.1 510.8 HUMAN 1 -27.6205 -29.4858 GPGLPRRSPLIRNRK-p Q6PFW1;S977-p GPGLPRRSPLIRNRK 0.446974032116271 0.838589831633193 0.123666666666667 -0.023 6.44984983861104 1.07500707567362 0.123666666666667 -0.023 0.226472261114697 0.780727168149576 1.36432523083727 -0.292559646959152 Q6PFW1 PPIP5K1 Q6PFW1.S977.p_PPIP5K1 Q6PFW1_S977s _1_1_977_977 Q6PFW1 Q6PFW1|Q6PFW1-2|B7WPL9|F8W9A8|Q6PFW1-3|Q6PFW1-4 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15317.15317.4 13.77 13.77 6.831 3 1 1 0 669.8694 2596.4885 S977s TMT10 960 (R) ALQTSPQPPEGPGLPRRsPLIR (N) ALQT(0.0)S(0.0)PQPPEGPGLPRRS(0.99)PLIR s:Phosphorylated S PPIP5K1 161343.9 3 4 1248.1 162.13 HUMAN 1 6.4498 -1.075 GPGLQKNSPGKPAQF-p Q96BT3;S288-p GPGLQKNSPGKPAQF 0.0684521497222417 0.292681987105016 -0.572666666666667 -0.188 25.1108476435471 7.04422749480994 -0.572666666666667 -0.188 0.00308258624116633 0.197504616126673 -5.0719059724463 -1.46834455988017 Q96BT3 CENPT Q96BT3.S288.p_CENPT Q96BT3_S288s _1_1_288_288 Q96BT3 Q96BT3|H3BTR4 Centromere protein T HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36980.36980.5 41.04 35.06 37.318 6 1 1 0 1163.371 5732.8699 S288s TMT10 287 (K) NsPGKPAQFLAGEAEEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEK (K) NS(0.99)PGKPAQFLAGEAEEVNAFALGFLS(0.0)T(0.0)S(0.0)S(0.0)GVS(0.0)GEDEVEPLHDGVEEAEK K:TMT10,s:Phosphorylated S CENPT 60706.9 2 4 2525.1 79.95 HUMAN 1 -25.1108 -7.0442 GPGPLRESLPSEDDS-p Q86YV5;S231-p GPGPLRESLPSEDDS 0.499793207479044 0.491219489435274 -0.0986666666666667 -0.067 5.55186555801845 4.12561930834809 -0.0986666666666667 -0.067 0.278492461773963 0.386756898773397 -1.20429820033694 -0.940903890747705 Q86YV5 SGK223 Q86YV5.S231.p_SGK223 Q86YV5_S231sS234s_2_2_231_234 Q86YV5 Q86YV5 Tyrosine-protein kinase PRAG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19567.19567.4 11.89 11.89 2.283 6 2 2 0 912.1519 3485.6553 S231s S234s TMT10 211 (K) LAAFAGTTSGCHQGPGPLREsLPsEDDSDQR (C) LAAFAGT(0.0)T(0.0)S(0.0)GCHQGPGPLRES(0.99)LPS(0.99)EDDS(0.0)DQR C:Carbamidomethylation,s:Phosphorylated S PRAG1 152359.5 1 23 223.1 426.19 HUMAN 1 -5.5519 -4.1256 GPGSGSKSPPATRAK-p I3L2J0;S20-p GPGSGSKSPPATRAK 0.298869124651315 0.031189407960935 0.149333333333333 -0.424666666666667 9.86073825814739 20.3443160055523 0.149333333333333 -0.424666666666667 0.103258586134315 0.00923779668142556 1.95752578995018 -3.94945987712871 I3L2J0 NotFound I3L2J0.S20.p_NotFound I3L2J0_S20s _1_1_20_20 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8466.9119.3 16.45 11.73 1.342 6 1 1 0 776.0594 2246.1963 S20s TMT10 7 (K) ACTGLSGPGSGSKsPPATR (A) ACT(0.0)GLS(0.0)GPGS(0.0)GS(0.0)KS(0.99)PPAT(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CIC 259056.7 8 1 23.1 999.57 HUMAN 1 9.8607 -20.3443 GPGSPPRTPPAPGPP-p Q6ZTN6-3;T556-p GPGSPPRTPPAPGPP 0.928819254455288 0.27702704206942 -0.0136666666666667 -0.141333333333333 0.63658911130602 7.34526736914202 -0.0136666666666667 -0.141333333333333 0.86365658538856 0.18427790365927 -0.180059944878415 -1.5208841265425 Q6ZTN6 ANKRD13D Q6ZTN6.3.T556.p_ANKRD13D Q6ZTN6-3_T556t _1_1_556_556 Q6ZTN6-3 Q6ZTN6-3|Q6ZTN6-2 Isoform 3 of Ankyrin repeat domain-containing protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16403.16403.3 13.85 6.62 2.159 3 1 1 0 860.7672 2500.3146 T556t TMT10 549 (R) GPGSPPRtPPAPGPPSFEEQLR (L) GPGS(0.0)PPRT(0.99)PPAPGPPS(0.0)FEEQLR t:Phosphorylated T ANKRD13D 68455.9 1 2 4000.1 39.36 HUMAN 1 -0.6366 -7.3453 GPGSRRPSADSESPG-p Q96PE2;S142-p GPGSRRPSADSESPG 0.820904102287946 0.0605537299054505 -0.0443333333333333 0.302333333333333 1.65187071472367 16.2229068148594 -0.0443333333333333 0.302333333333333 0.683617117157086 0.023862136105319 -0.430247480023527 3.10887380166819 Q96PE2 ARHGEF17 Q96PE2.S142.p_ARHGEF17 Q96PE2_S142s _1_1_142_142 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18001.18001.5 16.78 16.78 1.122 6 1 1 0 703.9352 3435.6879 S142s TMT10 132 (K) LFGGPGSRRPsADSESPGTPSPDGAAWEPPAR (E) LFGGPGS(0.0)RRPS(0.99)ADS(0.0)ES(0.0)PGT(0.0)PS(0.0)PDGAAWEPPAR s:Phosphorylated S ARHGEF17 223779.6 5 3 30.1 908.19 HUMAN 1 -1.6519 16.2229 GPGSWSRSLDRALEE-p Q96II8-2;S48-p GPGSWSRSLDRALEE 0.706540552407433 0.397115905477365 -0.065 0.094 2.83593566433824 5.33207670463547 -0.065 0.094 0.520482861459899 0.292949208893078 -0.686887324188189 1.16433089422642 Q96II8 LRCH3 Q96II8.2.S48.p_LRCH3 Q96II8-2_S48s _1_1_48_48 Q96II8-2 Q96II8-2 Isoform 2 of Leucine-rich repeat and calponin homology domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.36366.36366.3 16.21 16.21 16.209 4 1 1 0 785.088 2273.2662 S48s TMT10 48 (R) sLDRALEEAAVTGVLSLSGR (K) S(0.99)LDRALEEAAVT(0.0)GVLS(0.0)LS(0.0)GR s:Phosphorylated S LRCH3 90369.5 1 1 1119.1 175.39 HUMAN 1 -2.8359 5.3321 GPGTLDDSATICRVC-p Q13263;S624-p GPGTLDDSATICRVC 0.21671898036419 0.144894526954526 0.282666666666667 0.177333333333333 12.7970628149327 11.0509444366366 0.282666666666667 0.177333333333333 0.052516251380673 0.0785064892244689 2.47456222875631 2.1640559292319 Q13263 TRIM28 Q13263.S624.p_TRIM28 Q13263_S624s _1_1_624_624 Q13263 Q13263|Q13263-2 Transcription intermediary factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23265.23265.5 16.56 16.56 1.245 11 1 1 0 774.3695 3787.8494 S624s TMT10 592 (R) LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDsATICR (V) LAS(0.0)PS(0.0)GS(0.0)T(0.0)S(0.0)S(0.0)GLEVVAPEGT(0.0)S(0.0)APGGGPGT(0.0)LDDS(0.99)AT(0.0)ICR C:Carbamidomethylation,s:Phosphorylated S TRIM28 90316.8 3 19 118.1 555.36 HUMAN 1 12.7971 11.0509 GPGTPAGYGRGREEY-p P23246;Y691-p GPGTPAGYGRGREEY 0.46037124209973 0.0307324124975765 0.243666666666667 -0.709333333333333 6.20980226878551 20.4414983740797 0.243666666666667 -0.709333333333334 0.239342472486436 0.00903337756337686 1.32185331485172 -3.97052733110929 P23246 SFPQ P23246.Y691.p_SFPQ P23246_Y691y _1_1_691_691 P23246 P23246 Splicing factor, proline- and glutamine-rich GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8906.8906.2 8.75 7.17 2.651 2 1 1 0 715.3259 1349.6833 Y691y TMT10 682 (R) GMGPGTPAGyGR (G) GMGPGT(0.0)PAGY(0.99)GR y:Phosphorylated Y SFPQ 76262.2 2 1 380.1 8.75 HUMAN 1 6.2098 -20.4415 GPGVDLPSVNLSMPK-p Q09666;S5289-p GPGVDLPSVNLSMPK 0.293942250620987 0.0144726301921424 -0.305666666666667 0.611333333333333 10.0345065238504 25.4947863713151 -0.305666666666667 0.611333333333333 0.0992086060679593 0.00282176838196292 -1.98770606839285 5.16358071531673 Q09666 AHNAK Q09666.S5289.p_AHNAK Q09666_S5289s_1_1_5289_5289 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27888.27888.3 9.12 7.66 2.282 2 1 1 0 684.0345 1969.1193 S5289s N5291n TMT10 5282 (K) GPGVDLPsVnLSMPK (V) GPGVDLPS(0.99)VN(1.0)LS(0.0)MPK K:TMT10,s:Phosphorylated S,n:Deamidated AHNAK 629603.7 1 126 1.1 4313.36 HUMAN 1 -10.0345 25.4948 GPGVQLGSPDKKKRK-p Q9Y3Y4-2;S34-p GPGVQLGSPDKKKRK 0.911753399332893 0.0448335054864868 0.019 -0.324 0.781849268423589 18.0475032297367 0.019 -0.324 0.835247286027608 0.015676520583356 0.218225361175522 -3.46903594015421 Q9Y3Y4 PYGO1 Q9Y3Y4.2.S34.p_PYGO1 Q9Y3Y4-2_S34s _1_1_34_34 Q9Y3Y4-2 Q9Y3Y4-2 Isoform 2 of Pygopus homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19584.19584.4 21.56 21.56 14.441 2 1 1 0 695.3697 2698.4979 S34s TMT10 17 (R) GGDSGLDGLGGPGVQLGsPDKK (K) GGDS(0.0)GLDGLGGPGVQLGS(0.99)PDKK K:TMT10,s:Phosphorylated S PYGO1 45830.3 6 1 2869.1 67.8 HUMAN 1 0.7818 -18.0475 GPHDIGASPGDKKSK-p Q8IYB7;S31-p GPHDIGASPGDKKSK 0.53941356568805 0.00287323999157205 -0.155 -1.011 4.95449565979316 38.4350907086722 -0.155 -1.011 0.319558544220239 0.000143380776859792 -1.09571254727875 -9.44928705749514 Q8IYB7 DIS3L2 Q8IYB7.S31.p_DIS3L2 Q8IYB7_S31s _1_1_31_31 Q8IYB7 Q8IYB7|Q8IYB7-2|Q8IYB7-3|Q8IYB7-5|Q8IYB7-4 DIS3-like exonuclease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12043.12043.4 13.23 13.23 13.231 2 1 1 0 633.3469 2450.397 S31s TMT10 18 (R) GVSAVAGPHDIGAsPGDKK (S) GVS(0.0)AVAGPHDIGAS(0.99)PGDKK K:TMT10,s:Phosphorylated S DIS3L2 100304.4 1 2 1919.1 107.1 HUMAN 1 -4.9545 -38.4351 GPHRRLGSPQAIEEA-p Q6P0Q8;S1585-p GPHRRLGSPQAIEEA 0.93306667659969 0.0197234274726644 -0.024 -0.319 0.591702517175282 23.3997609208903 -0.024 -0.319 0.872629214036797 0.00457113353012062 -0.168072939782661 -4.64425271257368 Q6P0Q8 MAST2 Q6P0Q8.S1585.p_MAST2 Q6P0Q8_S1585s _1_1_1585_1585 Q6P0Q8 Q6P0Q8|Q6P0Q8-2 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24495.24495.4 15.18 8.93 2.075 7 1 1 0 1066.0216 4181.0974 S1585s TMT10 1582 (R) RLGsPQAIEEAASSSSAGPNLGQSGATDPIPPEGCWK (A) RLGS(0.99)PQAIEEAAS(0.0)S(0.0)S(0.0)S(0.0)AGPNLGQS(0.0)GAT(0.0)DPIPPEGCWK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAST2 197687.5 1 66 121.1 549.41 HUMAN 1 -0.5917 -23.3998 GPILGYDTD______-p Q99707;T1264-p GPILGYDTD______ 0.572570864246015 0.876471568679172 0.088 0.0306666666666667 4.46102255196537 0.805013427727627 0.088 0.0306666666666667 0.358012132759309 0.83080414997734 1.00429080413812 0.224205037374946 Q99707 MTR Q99707.T1264.p_MTR Q99707_T1264t _1_1_1264_1264 Q99707 Q99707|Q99707-2 Methionine synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36863.36863.2 7.14 7.14 2.803 2 1 1 0 779.8731 1478.7729 T1264t TMT10 1255 (K) WLGPILGYDtD (-) WLGPILGY(0.0)DT(0.99)D t:Phosphorylated T MTR 141836.9 1 1 7254.1 7.14 HUMAN 1 4.461 0.805 GPKVDIDTPDIDIHG-p Q09666;T4100-p GPKVDIDTPDIDIHG 0.286866398353762 0.587605980502824 -0.192 0.068 10.2315583120594 3.12076823378735 -0.192 0.0680000000000001 0.0948078217944289 0.487442257662108 -2.02197032118304 0.744729771421849 Q09666 AHNAK Q09666.T4100.p_AHNAK Q09666_T4100t _1_1_4100_4100 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22123.22123.5 25.63 25.63 6.98 2 1 1 0 674.9542 3290.7723 T4100t TMT10 4087 (K) ADIDVSGPKVDIDtPDIDIHGPEGK (L) ADIDVS(0.0)GPKVDIDT(0.99)PDIDIHGPEGK K:TMT10,t:Phosphorylated T AHNAK 629603.7 2 93 1.1 4313.36 HUMAN 1 -10.2316 3.1208 GPKVDIDTPDINIEG-p Q09666;T3716-p GPKVDIDTPDINIEG 0.836407846469932 0.0462463739892468 0.033 0.487 1.49764723008052 17.8629018122368 0.033 0.487 0.708329414587053 0.0163572322000337 0.39443635337105 3.43178966746244 Q09666 AHNAK Q09666.T3716.p_AHNAK Q09666_T3716t _1_1_3716_3716 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19826.19826.3 19.47 19.47 6.149 2 1 1 0 917.8203 2671.4757 T3716t TMT10 3709 (K) GPKVDIDtPDINIEGSEGK (F) GPKVDIDT(0.99)PDINIEGS(0.0)EGK K:TMT10,t:Phosphorylated T AHNAK 629603.7 3 90 1.1 4313.36 HUMAN 1 1.4976 17.8629 GPKVDINTPDVDVHG-p Q09666;T4766-p GPKVDINTPDVDVHG 0.633387977519939 0.673796793702283 0.072 0.0813333333333334 3.69341646380363 2.34440679694484 0.072 0.0813333333333334 0.427226667578576 0.582853381332708 0.858052633950527 0.583718915125408 Q09666 AHNAK Q09666.T4766.p_AHNAK Q09666_T4766t _1_1_4766_4766 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19326.19326.5 30.49 30.49 99 1 1 1 0 622.1318 3026.6667 T4766t TMT10 4759 (K) GPKVDINtPDVDVHGPDWHLK (M) GPKVDINT(1.0)PDVDVHGPDWHLK K:TMT10,t:Phosphorylated T AHNAK 629603.7 6 102 1.1 4313.36 HUMAN 1 3.6934 2.3444 GPKVGIDTPDIDIHG-p Q09666;T4564-p GPKVGIDTPDIDIHG 0.376244666084344 0.38192762411307 0.124 0.172 7.85165531911898 5.5534448454236 0.124 0.172 0.163996457940808 0.278391207971219 1.60941581777863 1.20431585962703 Q09666 AHNAK Q09666.T4564.p_AHNAK Q09666_T4564t _1_1_4564_4564 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19082.19082.3 23.2 23.2 99 1 1 1 0 734.3811 2121.1592 T4564t TMT10 4560 (K) VGIDtPDIDIHGPEGK (L) VGIDT(1.0)PDIDIHGPEGK K:TMT10,t:Phosphorylated T AHNAK 629603.7 3 101 1.1 4313.36 HUMAN 1 7.8517 5.5534 GPLCKSVTPTKEFLK-p Q96T23;T408-p GPLCKSVTPTKEFLK 0.110880621512576 0.00758180013463581 1.966 -1.62366666666667 19.9744589567267 30.2864581938206 1.966 -1.62366666666667 0.0100589836983163 0.000936168837632213 3.87347112830028 -6.50930718119158 Q96T23 RSF1 Q96T23.T408.p_RSF1 Q96T23_T408t _1_1_408_408 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22464.22464.4 12.42 4.93 2.082 4 1 1 0 942.018 3685.0743 T408t TMT10 406 (K) SVtPTKEFLKDEIKQEEETCK (R) S(0.0)VT(0.99)PT(0.0)KEFLKDEIKQEEET(0.0)CK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T RSF1 165358.1 1 3 39.1 857.38 HUMAN 1 19.9745 -30.2865 GPLDAPGSPLACTEP-p Q99501;S620-p GPLDAPGSPLACTEP 0.390532605380697 0.0404650891952282 0.232 0.506666666666667 7.54544262844556 18.6758202311271 0.232 0.506666666666667 0.175976930079376 0.0135649431154036 1.55619199003851 3.59726786407452 Q99501 GAS2L1 Q99501.S620.p_GAS2L1 Q99501_S620s _1_1_620_620 Q99501 Q99501|A0A5E8|Q99501-4 GAS2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19990.19990.4 18.88 18.88 3.702 9 1 1 0 942.9164 3688.6727 S620s TMT10 595 (R) SQALSSSSDEGSPCPGMGGPLDAPGsPLACTEPSR (T) S(0.0)QALS(0.0)S(0.0)S(0.0)S(0.0)DEGS(0.0)PCPGMGGPLDAPGS(0.99)PLACT(0.0)EPS(0.0)R C:Carbamidomethylation,s:Phosphorylated S GAS2L1 73400.1 2 13 1084.1 179.86 HUMAN 1 7.5454 18.6758 GPLDGSPYAQVQRPP-p Q63HR2-4;Y493-p GPLDGSPYAQVQRPP 0.165364843830317 0.00788257633252158 0.337666666666667 0.888 15.6488702819282 29.9991008803159 0.337666666666667 0.888 0.0272340964886867 0.00100020705139033 3.00105635005807 6.42167165573263 Q63HR2 TNS2 Q63HR2.4.Y493.p_TNS2 Q63HR2-4_Y493y _1_1_493_493 Q63HR2-4 Q63HR2-4|Q63HR2-6|F8VV64|Q63HR2-2|Q63HR2-5 Isoform 4 of Tensin-2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.9495.9673.2 26.32 26.32 2.798 2 1 1 0 909.4389 1737.9031 Y493y Hydrogen 486 (R) GPLDGSPyAQVQRPPR (Q) GPLDGS(0.0)PY(0.99)AQVQRPPR y:Phosphorylated Y TNS2 155500.6 11 1 112.1 26.32 HUMAN 1 15.6489 29.9991 GPLGRRASDGGANIQ-p H0Y494;S503-p GPLGRRASDGGANIQ 0.538800686374925 0.0173874485657659 0.102666666666667 0.377333333333333 4.96384137354214 24.252488102319 0.102666666666667 0.377333333333333 0.31887161594096 0.00375622146177081 1.09742764820937 4.85109230166267 H0Y494 SIK3 H0Y494.S503.p_SIK3 H0Y494_S503s _1_1_503_503 H0Y494 J3KPC8|Q9Y2K2|H0Y494|Q9Y2K2-4|Q9Y2K2-3 Serine/threonine-protein kinase SIK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16340.16340.4 20.78 20.78 99 1 1 1 0 615.3397 2378.3668 S503s TMT10 501 (R) RAsDGGANIQLHAQQLLK (R) RAS(1.0)DGGANIQLHAQQLLK K:TMT10,s:Phosphorylated S SIK3 139782.1 4 4 1025.2 187.04 HUMAN 1 4.9638 24.2525 GPLNSESSNQSLCSV-p Q86UE8;S35-p GPLNSESSNQSLCSV 0.133465545963209 0.00685116308834067 0.517333333333333 1.01533333333333 18.0042353066054 31.0516518022778 0.517333333333333 1.01533333333333 0.015833483336431 0.000784937033676053 3.46312248423816 6.74739106882777 Q86UE8 TLK2 Q86UE8.S35.p_TLK2 Q86UE8_S35s _1_1_35_35 Q86UE8 Q86UE8|Q86UE8-2|Q86UE8-3 Serine/threonine-protein kinase tousled-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19786.19786.3 15.7 15.7 1.103 7 1 1 0 902.104 2624.3238 S35s TMT10 28 (K) GPLNSESsNQSLCSVGSLSDK (E) GPLNS(0.0)ES(0.0)S(0.99)NQS(0.0)LCS(0.0)VGS(0.0)LS(0.0)DK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TLK2 88458.2 4 1 1183.1 168.82 HUMAN 1 18.0042 31.0517 GPLPLGGSGLMEEMS-p A0A0U1RRM6;S674-p GPLPLGGSGLMEEMS 0.359362450321461 0.234219949582367 -0.192333333333333 0.247333333333333 8.25778685805995 8.300689802295 -0.192333333333333 0.247333333333333 0.149355532365627 0.147887347582657 -1.67985266976415 1.68673016958417 A0A0U1RRM6 NotFound A0A0U1RRM6.S674.p_NotFound A0A0U1RRM6_S674s _1_1_674_674 A0A0U1RRM6 A0A0U1RRM6|Q8N8S7|Q8N8S7-2|Q8N8S7-3 Protein enabled homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.37189.37189.3 19.17 19.17 6.259 2 1 1 0 827.08 2399.2624 S674s TMT10 665 (R) GNGPLPLGGsGLMEEMSALLAR (R) GNGPLPLGGS(0.99)GLMEEMS(0.0)ALLAR s:Phosphorylated S ENAH 87740.8 1 4 794.2 224.28 HUMAN 1 -8.2578 8.3007 GPLPVPFTNGEIQKE-p O14745;T260-p GPLPVPFTNGEIQKE 0.158669507635931 0.425604281504367 0.279 0.084 16.0154265680713 4.93715345773725 0.279 0.084 0.0250297979131082 0.320837153238591 3.07115290629161 1.0923100347352 O14745 SLC9A3R1 O14745.T260.p_SLC9A3R1 O14745_T260t_1_1_260_260 O14745 O14745|O14745-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23617.23617.4 11.29 11.29 1.542 3 1 1 0 885.7217 3458.8796 T260t N268n TMT10 244 (R) VIPSQEHLNGPLPVPFtNGEIQKEnSR (E) VIPS(0.0)QEHLN(0.0)GPLPVPFT(0.99)N(0.0)GEIQKEN(0.99)S(0.0)R K:TMT10,t:Phosphorylated T,n:Deamidated SLC9A3R1 39153 12 9 534.1 279.04 HUMAN 1 16.0154 4.9372 GPLQGRRSTELTDLG-p Q96BY6;S302-p GPLQGRRSTELTDLG 0.590876065472109 0.535411245870968 -0.0783333333333333 0.0656666666666667 4.20964422531492 3.65030707150011 -0.0783333333333333 0.0656666666666667 0.379346059786439 0.431488566993686 -0.956997102989717 0.849531141433602 Q96BY6 DOCK10 Q96BY6.S302.p_DOCK10 Q96BY6_S302s _1_1_302_302 Q96BY6 Q96BY6|Q96BY6-3|Q96BY6-2 Dedicator of cytokinesis protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28048.28048.4 21.78 21.78 1.227 10 1 1 0 1189.0416 4673.1395 S302s TMT10 302 (R) sTELTDLGLDSLDNSVTCECTPEETDSSENNLHADFAK (Y) S(0.99)T(0.0)ELT(0.0)DLGLDS(0.0)LDNS(0.0)VT(0.0)CECT(0.0)PEET(0.0)DS(0.0)S(0.0)ENNLHADFAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DOCK10 251979.7 2 2 2997.1 63.67 HUMAN 1 -4.2096 3.6503 GPLRRQETENKYETD-p Q9UPX8-3;T1278-p GPLRRQETENKYETD 0.864453015861562 0.195015392953895 -0.042 0.37 1.23364725724257 9.33402644461325 -0.042 0.37 0.752723152269738 0.116572834218644 -0.331501417003679 1.86550284836663 Q9UPX8 SHANK2 Q9UPX8.3.T1278.p_SHANK2 Q9UPX8-3_T1278t _1_1_1278_1278 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6|Q9UPX8-4 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7920.7920.4 14.04 8.9 4.481 3 1 1 0 570.0385 2197.1613 T1278t TMT10 1275 (R) RQEtENKYETDLGR (D) RQET(0.99)ENKY(0.0)ET(0.0)DLGR K:TMT10,t:Phosphorylated T SHANK2 202341.2 2 21 86.1 628.23 HUMAN 1 -1.2336 9.334 GPLSAQPSVEKENLA-p Q71F23;S194-p GPLSAQPSVEKENLA 0.189867960204676 0.0612841680255304 0.209666666666667 -0.216666666666667 14.1152217264975 16.1479607596631 0.209666666666667 -0.216666666666667 0.038768395502844 0.0242774978332442 2.71409800949358 -3.09444045343452 Q71F23 CENPU Q71F23.S194.p_CENPU Q71F23_S194s _1_1_194_194 Q71F23 Q71F23|Q71F23-3|Q09GN1 Centromere protein U HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20084.20084.4 15.86 15.86 5.976 5 1 1 0 770.9172 3000.682 S194s TMT10 186 (K) TGPLSAQPsVEKENLAIESQSK (T) T(0.0)GPLS(0.0)AQPS(0.99)VEKENLAIES(0.0)QS(0.0)K K:TMT10,s:Phosphorylated S CENPU 47749 4 9 1181.1 168.95 HUMAN 1 14.1152 -16.148 GPLSEPGSARAYSNS-p Q9H1Z4;S74-p GPLSEPGSARAYSNS 0.729757185802638 0.191592734526852 0.0623333333333333 0.194333333333333 2.59534698327581 9.43717919071023 0.0623333333333333 0.194333333333333 0.550129965652604 0.113836643221662 0.63695216520407 1.88335815395806 Q9H1Z4 WDR13 Q9H1Z4.S74.p_WDR13 Q9H1Z4_S70sS74s_2_2_70_74 Q9H1Z4 Q9H1Z4 WD repeat-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14801.14801.3 10.15 10.15 6.424 3 2 2 0 508.2222 1362.7215 S70s S74s TMT10 66 (R) YGPLsEPGsAR (A) Y(0.0)GPLS(0.99)EPGS(0.99)AR s:Phosphorylated S WDR13 54322.7 2 5 3757.1 43.8 HUMAN 1 2.5953 9.4372 GPLSRRNTAPEAQES-p Q69YU3;T316-p GPLSRRNTAPEAQES 0.267348209301553 0.160293631517254 0.347 0.193666666666667 10.856600493161 10.4580747961208 0.347 0.193666666666667 0.0820993938504936 0.0899896412321678 2.13100543593882 2.06054172406814 Q69YU3 ANKRD34A Q69YU3.T316.p_ANKRD34A Q69YU3_T316t _1_1_316_316 Q69YU3 Q69YU3 Ankyrin repeat domain-containing protein 34A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6709.6709.3 7.36 7.36 7.363 3 1 1 0 692.6758 1996.0409 T316t TMT10 314 (R) RNtAPEAQESGPPSGLR (Q) RNT(0.99)APEAQES(0.0)GPPS(0.0)GLR t:Phosphorylated T ANKRD34A 52919.9 1 5 922.1 199.97 HUMAN 1 10.8566 10.4581 GPMPKPHSVSLNDTE-p Q9P0L0-2;S209-p GPMPKPHSVSLNDTE 0.380643803112374 0.0468120353812948 -0.127666666666667 -0.305 7.75047209377339 17.7856446885021 -0.127666666666667 -0.305 0.167862153598622 0.0166508163637241 -1.59184206168983 -3.41625821637351 Q9P0L0 VAPA Q9P0L0.2.S209.p_VAPA Q9P0L0-2_S209s _1_1_209_209 Q9P0L0-2 Q9P0L0-2 Isoform 2 of Vesicle-associated membrane protein-associated protein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11038.11038.5 17.69 17.69 2.356 4 1 1 0 601.7159 2924.5867 S209s TMT10 200 (K) QDGPMPKPHsVSLNDTETRK (L) Q(0.0)DGPM(0.0)PKPHS(0.99)VS(0.0)LN(0.0)DT(0.0)ET(0.0)RK K:TMT10,s:Phosphorylated S VAPA 32841.2 5 6 1813.1 113.12 HUMAN 1 -7.7505 -17.7856 GPNHIVGSPFKAKVT-p O75369-8;S2496-p GPNHIVGSPFKAKVT 0.490118275738277 0.183313099831904 0.0973333333333333 0.143333333333333 5.70969200484355 9.69371347741935 0.0973333333333334 0.143333333333333 0.268553489302664 0.107307147969565 1.23267000755504 1.92779084400278 O75369 FLNB O75369.8.S2496.p_FLNB O75369-8_S2496s _1_1_2496_2496 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|A0A0A0MT44 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16632.16632.3 14.2 10.05 13.757 2 1 1 0 637.6699 1831.0267 S2496s TMT10 2487 (K) YGGPNHIVGsPFK (A) Y(0.0)GGPNHIVGS(0.99)PFK K:TMT10,s:Phosphorylated S FLNB 283797.6 4 40 67.1 680.07 HUMAN 1 5.7097 9.6937 GPNRSNMSPHGLPAR-p Q13330;S449-p GPNRSNMSPHGLPAR 0.996516649274227 0.229170230271199 0.000666666666666667 0.128 0.0267356024459208 8.42925584588977 0.000666666666666659 0.128 0.993862809995201 0.143573542240735 0.00805359342171074 1.70898315947139 Q13330 MTA1 Q13330.S449.p_MTA1 Q13330_S449s _1_1_449_449 Q13330 Q13330|E7ESY4|Q13330-3 Metastasis-associated protein MTA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7215.7215.2 13.6 7.8 3.494 2 1 1 0 738.3546 1395.7364 S449s TMT10 446 (R) SNMsPHGLPAR (S) S(0.0)NMS(0.99)PHGLPAR s:Phosphorylated S MTA1 81469.4 5 3 1200.1 167 HUMAN 1 0.0267 8.4293 GPPAAQLTPPPAPVG-p Q8IY67-2;T463-p GPPAAQLTPPPAPVG 0.233121410286087 0.669142598842321 -0.175666666666667 0.045 12.1562406352753 2.38429207072624 -0.175666666666667 0.045 0.0608661646481413 0.577525005509629 -2.36007833030929 0.592245385414679 Q8IY67 RAVER1 Q8IY67.2.T463.p_RAVER1 Q8IY67-2_T463t _1_1_463_463 Q8IY67-2 E9PAU2|Q8IY67-2|A0A087WZ13 Isoform 2 of Ribonucleoprotein PTB-binding 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30227.30227.5 28.77 28.77 14.461 2 1 1 0 874.6984 4289.4902 T463t TMT10 433 (R) GKPPPLLPSVLGPAGGDREALGLGPPAAQLtPPPAPVGLR (G) GKPPPLLPS(0.0)VLGPAGGDREALGLGPPAAQLT(0.99)PPPAPVGLR K:TMT10,t:Phosphorylated T RAVER1 78371.6 8 4 785.1 225.39 HUMAN 1 -12.1562 2.3843 GPPARSPSQDFSFIE-p Q9C0C2;S1554-p GPPARSPSQDFSFIE 0.830680447880338 0.217338998085229 -0.031 0.140333333333333 1.55070952112037 8.72310486095229 -0.031 0.140333333333333 0.699727669862232 0.134180533380264 -0.40683281895411 1.75982010160361 Q9C0C2 TNKS1BP1 Q9C0C2.S1554.p_TNKS1BP1 Q9C0C2_S1554s _1_1_1554_1554 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36407.36407.3 23.71 23.71 1.275 6 1 1 0 920.7462 2680.265 S1554s TMT10 1552 (R) SPsQDFSFIEDTEILDSAMYR (S) S(0.0)PS(0.99)QDFS(0.0)FIEDT(0.0)EILDS(0.0)AMY(0.0)R s:Phosphorylated S TNKS1BP1 182819.3 32 64 4.1 2105.7 HUMAN 1 -1.5507 8.7231 GPPERTVTPALSSNV-p Q9C0E8;T213-p GPPERTVTPALSSNV 0.731724827574726 0.292966514296182 -0.05 -0.124 2.5727932778506 7.0394719682822 -0.05 -0.124 0.552994322138364 0.197721002219867 -0.632220945620668 -1.46751308371718 Q9C0E8 KIAA1715 Q9C0E8.T213.p_KIAA1715 Q9C0E8_T213t _1_1_213_213 Q9C0E8 Q9C0E8-4|Q9C0E8-2|Q9C0E8-3 Endoplasmic reticulum junction formation protein lunapark HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19898.19898.3 15.54 10.97 2.186 4 1 1 0 555.3033 1583.9318 T213t TMT10 211 (R) TVtPALSSNVLPR (H) T(0.0)VT(0.99)PALS(0.0)S(0.0)NVLPR t:Phosphorylated T LNPK 48081.4 2 4 1776.1 115.62 HUMAN 1 -2.5728 -7.0395 GPPGAHRSPATSAGP-p A1L020;S428-p GPPGAHRSPATSAGP 0.636743873817189 0.99229111578383 0.0793333333333333 0.00166666666666671 3.65673479583295 0.0487541226866734 0.0793333333333333 0.00166666666666671 0.430850419779343 0.988836725373208 0.850917788623693 0.0146482239203655 A1L020 MEX3A A1L020.S428.p_MEX3A A1L020_S428s _1_1_428_428 A1L020 A1L020 RNA-binding protein MEX3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11717.11717.3 16.21 10.74 1.234 3 1 1 0 826.0925 2396.2996 S428s TMT10 420 (R) AGPPGAHRsPATSAGPELAGLPR (R) AGPPGAHRS(0.99)PAT(0.0)S(0.0)AGPELAGLPR s:Phosphorylated S MEX3A 55085.2 4 4 2523.1 80 HUMAN 1 3.6567 0.0488 GPPLNSESGEEAPTG-p O15446-2;S492-p GPPLNSESGEEAPTG 0.255523666986709 0.49686047046344 0.239 0.075 11.2646524066504 4.06296579484062 0.239 0.075 0.0747368448422761 0.392376889904458 2.20254069899048 0.928987415606185 O15446 CD3EAP O15446.2.S492.p_CD3EAP O15446-2_S490sS492s_2_2_490_492 O15446-2 O15446-2 Isoform 2 of DNA-directed RNA polymerase I subunit RPA34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23316.23316.3 13.42 13.42 4.745 4 2 2 0 1086.1364 3095.4499 N489n S490s S492s TMT10 474 (R) MPETVPQEEMPGPPLnsEsGEEAPTGR (D) MPET(0.0)VPQEEMPGPPLN(1.0)S(0.99)ES(0.99)GEEAPT(0.0)GR n:Deamidated,s:Phosphorylated S CD3EAP 55456.1 1 10 1198.1 167.21 HUMAN 1 11.2647 4.063 GPPPGLLTPPVATEL-p Q8N163;T35-p GPPPGLLTPPVATEL 0.260386657049657 0.262527073530046 0.175333333333333 0.133666666666667 11.0856696852319 7.65247214688085 0.175333333333333 0.133666666666667 0.0778812711810543 0.171693077553151 2.17112477170505 1.57433282668386 Q8N163 CCAR2 Q8N163.T35.p_CCAR2 Q8N163_T35t _1_1_35_35 Q8N163 Q8N163|Q8N163-2|E5RHH8 Cell cycle and apoptosis regulator protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32772.32772.4 17.01 17.01 2.76 8 1 1 0 851.4443 3322.7844 T35t TMT10 17 (R) NFSGTASTSLLGPPPGLLtPPVATELSQNAR (H) NFS(0.0)GT(0.0)AS(0.0)T(0.0)S(0.0)LLGPPPGLLT(0.99)PPVAT(0.0)ELS(0.0)QNAR t:Phosphorylated T CCAR2 103527.3 4 2 891.1 204.52 HUMAN 1 11.0857 7.6525 GPPPPPRSRGPPRGL-p P38159;S102-p GPPPPPRSRGPPRGL 0.154754532748189 0.42144934029647 0.262333333333333 0.103 16.2857039145141 4.994409369005 0.262333333333333 0.103 0.0235195825167486 0.316635105096849 3.12324240970831 1.10281080813544 P38159 RBMX P38159.S102.p_RBMX P38159_S102s _1_1_102_102 P38159 P38159|P38159-2|H3BT71 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3029.3029.3 9.49 9.49 99 1 1 1 0 475.9276 1345.8014 S102s TMT10 94 (R) RGPPPPPRsR (G) RGPPPPPRS(1.0)R s:Phosphorylated S RBMX 42331.1 6 5 102.1 595.29 HUMAN 1 16.2857 4.9944 GPPPRAPSRNLAPTP-p Q8IU81;S371-p GPPPRAPSRNLAPTP 0.142729476697731 0.296635608734828 0.254666666666667 0.17 17.2700165993053 6.96751320303894 0.254666666666667 0.17 0.0187498734160593 0.201024356096298 3.31600753540965 1.45492527158236 Q8IU81 IRF2BP1 Q8IU81.S371.p_IRF2BP1 Q8IU81_S371s _1_1_371_371 Q8IU81 Q8IU81 Interferon regulatory factor 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19348.19348.4 9.78 9.78 3.666 3 1 1 0 959.4815 3754.9325 S371s TMT10 340 (R) SFREPAPAEALPQQYPEPAPAALCGPPPRAPsR (N) S(0.0)FREPAPAEALPQQY(0.0)PEPAPAALCGPPPRAPS(0.99)R C:Carbamidomethylation,s:Phosphorylated S IRF2BP1 62599.7 5 4 274.1 392.67 HUMAN 1 17.27 6.9675 GPPRRAGSQERGPLR-p P49750-4;S1119-p GPPRRAGSQERGPLR 0.574498176987848 0.115191430933863 0.113 0.213666666666667 4.42996135377619 12.3829243775004 0.113 0.213666666666667 0.360581851688923 0.0577706910060336 0.998475402632112 2.39920239204763 P49750 YLPM1 P49750.4.S1119.p_YLPM1 P49750-4_S1119s _1_1_1119_1119 P49750-4 P49750-4|P49750-3 Isoform 4 of YLP motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3339.3339.4 10.21 10.21 99 1 1 1 0 384.7053 1455.8342 S1119s TMT10 1116 (R) RAGsQERGPLR (R) RAGS(1.0)QERGPLR s:Phosphorylated S YLPM1 241869.3 6 12 669.1 249.34 HUMAN 1 4.43 12.3829 GPPSTRITPEFSKWA-p Q5VTB9;T446-p GPPSTRITPEFSKWA 0.641331338953564 0.0183356444772992 0.0673333333333333 0.329666666666667 3.60216259056529 23.9038650653392 0.0673333333333333 0.329666666666667 0.436298521161444 0.00407017885229988 0.84027534207122 4.76579862068477 Q5VTB9 RNF220 Q5VTB9.T446.p_RNF220 Q5VTB9_T446t _1_1_446_446 Q5VTB9 Q5VTB9|Q5VTB9-3 E3 ubiquitin-protein ligase RNF220 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19388.19388.3 8.79 5.83 1.181 4 1 1 0 822.7778 2386.3495 T446t TMT10 433 (R) GAVLNGGPPSTRItPEFSK (W) GAVLNGGPPS(0.0)T(0.0)RIT(0.99)PEFS(0.0)K K:TMT10,t:Phosphorylated T RNF220 63791.2 2 1 6045.1 14.46 HUMAN 1 3.6022 23.9039 GPPTPAKTPGASAAL-p Q8IWY9;T75-p GPPTPAKTPGASAAL 0.633387977519939 0.00358460126670815 0.0836666666666667 -0.742333333333333 3.69283504581807 36.4357427410095 0.0836666666666667 -0.742333333333333 0.427283866992063 0.000227209102349576 0.857939659581096 -8.63808916287543 Q8IWY9 CDAN1 Q8IWY9.T75.p_CDAN1 Q8IWY9_T71tT75t_2_2_71_75 Q8IWY9 Q8IWY9|Q8IWY9-1 Codanin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18330.18330.5 14.95 14.95 4.322 3 2 2 0 653.3526 3102.794 T71t T75t TMT10 64 (R) VLPQGPPtPAKtPGASAALPGRPGGPPR (G) VLPQGPPT(0.99)PAKT(0.99)PGAS(0.0)AALPGRPGGPPR K:TMT10,t:Phosphorylated T CDAN1 135657.7 2 7 1756.1 117.34 HUMAN 1 3.6928 -36.4357 GPQGPRRTPTMPQEE-p Q9NYV4-2;T1244-p GPQGPRRTPTMPQEE 0.137289036873108 0.0155144843126778 -0.616 0.456333333333333 17.6922936359039 25.016675346962 -0.616 0.456333333333333 0.0170125978615228 0.00315015893135607 -3.40025703042929 5.04170321704416 Q9NYV4 CDK12 Q9NYV4.2.T1244.p_CDK12 Q9NYV4-2_T1244t _1_1_1244_1244 Q9NYV4-2 Q9NYV4-2 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7615.7615.3 14.66 14.66 1.495 2 1 1 0 599.6207 1716.8788 T1244t Hydrogen 1243 (R) RtPTMPQEEAAEK (R) RT(0.99)PT(0.0)MPQEEAAEK K:TMT10-Lys-Only,t:Phosphorylated T CDK12 163853.1 8 33 59.1 708.76 HUMAN 1 -17.6923 25.0167 GPQIKELTDEEAERL-p Q9Y266;T108-p GPQIKELTDEEAERL 0.138321354805349 0.0632911010018883 -0.535 0.252666666666667 17.5989373833005 15.9599230857742 -0.535 0.252666666666667 0.0173822607986083 0.0253517352841639 -3.38154790856991 3.05834456482223 Q9Y266 NUDC Q9Y266.T108.p_NUDC Q9Y266_T108t _1_1_108_108 Q9Y266 Q9Y266 Nuclear migration protein nudC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21096.21096.5 19.78 19.78 99 1 1 1 0 591.7192 2874.6027 T108t TMT10 106 (K) ELtDEEAERLQLEIDQKK (D) ELT(1.0)DEEAERLQLEIDQKK K:TMT10,t:Phosphorylated T NUDC 38299.3 5 2 739.1 234.62 HUMAN 1 -17.5989 15.9599 GPQITGPSLEGDLGL-p Q09666;S379-p GPQITGPSLEGDLGL 0.433714089398761 0.934066297474423 0.113333333333333 -0.00866666666666664 6.68550658770886 0.418479754600793 0.113333333333333 -0.00866666666666663 0.21451088825706 0.90813836787205 1.40584253136362 -0.120881380917722 Q09666 AHNAK Q09666.S379.p_AHNAK Q09666_S379s _1_1_379_379 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25641.25641.3 18.52 14.74 5.843 2 1 1 0 864.1671 2510.5161 S379s TMT10 370 (K) LKGPQITGPsLEGDLGLK (G) LKGPQIT(0.0)GPS(0.99)LEGDLGLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 20 1.1 4313.36 HUMAN 1 6.6855 -0.4185 GPQKGPASDSETEDA-p Q96ST2;S313-p GPQKGPASDSETEDA 0.0768338580443976 0.342521847218527 -0.356666666666667 -0.140333333333333 23.8581345782686 6.16314396817188 -0.356666666666667 -0.140333333333333 0.00411326359859481 0.241927703649459 -4.76027011679542 -1.31325429587101 Q96ST2 IWS1 Q96ST2.S313.p_IWS1 Q96ST2_S313sS315s_2_2_313_315 Q96ST2 Q96ST2|Q96ST2-3 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9141.9141.4 14.08 14.08 1.324 7 2 2 0 771.5816 2923.3805 S313s S315s TMT10 299 (R) VSDSESEGPQKGPAsDsETEDASR (H) VS(0.0)DS(0.0)ES(0.0)EGPQKGPAS(0.99)DS(0.99)ET(0.0)EDAS(0.0)R K:TMT10,s:Phosphorylated S IWS1 92010 1 14 230.1 422.87 HUMAN 1 -23.8581 -6.1631 GPQPPTVSPIRSSRP-p P46087-4;S819-p GPQPPTVSPIRSSRP 0.803042159535173 0.00167082213187757 0.0363333333333333 -0.856 1.83473455163468 44.1288175946231 0.0363333333333333 -0.856 0.655430345655586 3.86472183223047e-05 0.471883594408291 -12.153977004138 P46087 NOP2 P46087.4.S819.p_NOP2 P46087-4_S819s _1_1_819_819 P46087-4 P46087-4|P46087-2 Isoform 4 of Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12233.12441.3 15.84 15.84 1.11 3 1 1 0 790.7589 2290.292 S819s TMT10 806 (K) QNDTPKGPQPPTVsPIR (S) QNDT(0.0)PKGPQPPT(0.0)VS(0.99)PIR K:TMT10,s:Phosphorylated S NOP2 93257.6 13 5 1090.1 179.08 HUMAN 1 1.8347 -44.1288 GPQVPHQSPPKRVSS-p Q9NYF3;S162-p GPQVPHQSPPKRVSS 0.12022471324384 0.149222071943031 -0.282 -0.156666666666667 19.1287269846893 10.87382813689 -0.282 -0.156666666666667 0.0122215784976157 0.0817743661136887 -3.69441039996337 -2.1330704658818 Q9NYF3 FAM53C Q9NYF3.S162.p_FAM53C Q9NYF3_S162s _1_1_162_162 Q9NYF3 Q9NYF3 Protein FAM53C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5037.5037.3 15.14 15.14 7.62 2 1 1 0 694.6885 2002.087 S162s TMT10 149 (R) GSGGGGGPQVPHQsPPK (R) GS(0.0)GGGGGPQVPHQS(0.99)PPK K:TMT10,s:Phosphorylated S FAM53C 43832.4 9 4 976.1 192.85 HUMAN 1 -19.1287 -10.8738 GPRARLSSATANALY-p Q6ZRV2;S1025-p GPRARLSSATANALY 0.00861592953244037 0.00162286863808758 -1.378 -1.29466666666667 52.9064366445818 44.5696178672137 -1.378 -1.29466666666667 5.12101839138278e-06 3.49171037451112e-05 -17.8498956872562 -12.3908313273235 Q6ZRV2 FAM83H Q6ZRV2.S1025.p_FAM83H Q6ZRV2_S1025s _1_1_1025_1025 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14311.14311.3 13.51 13.51 1.401 7 1 1 0 779.383 2256.1669 S1025s Hydrogen 1023 (R) LSsATANALYSSNLRDDTK (A) LS(0.0)S(0.99)AT(0.0)ANALY(0.0)S(0.0)S(0.0)NLRDDT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S FAM83H 127633.5 3 30 7.1 1347.23 HUMAN 1 -52.9064 -44.5696 GPREPPQSARRKRSY-p Q9NQS7;S446-p GPREPPQSARRKRSY 0.395304354889455 0.409759757098886 0.143 -0.187333333333333 7.4368881751184 5.15523231804094 0.143 -0.187333333333333 0.18043101095804 0.305124280401613 1.53729201821712 -1.13219572012428 Q9NQS7 INCENP Q9NQS7.S446.p_INCENP Q9NQS7_S446s _1_1_446_446 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4645.4645.3 10.23 6.53 4.633 2 1 1 0 645.3065 1853.9303 S446s TMT10 434 (K) TDQADGPREPPQsAR (R) T(0.0)DQADGPREPPQS(0.99)AR s:Phosphorylated S INCENP 105826.3 1 17 138.1 524.38 HUMAN 1 7.4369 -5.1552 GPRESQPSPAQPRAE-p Q5XUX0;S403-p GPRESQPSPAQPRAE 0.597792385463868 0.084571022194982 0.0713333333333333 0.215666666666667 4.12704689517819 14.2021101617957 0.0713333333333333 0.215666666666667 0.386629787253033 0.0380004713737243 0.94133814041955 2.72843683061736 Q5XUX0 FBXO31 Q5XUX0.S403.p_FBXO31 Q5XUX0_S403s _1_1_403_403 Q5XUX0 Q5XUX0|Q5XUX0-2|A0A0C4DGU8 F-box only protein 31 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4695.4695.2 9.84 9.84 2.889 2 1 1 0 703.3374 1325.7011 S403s TMT10 399 (R) ESQPsPAQPR (A) ES(0.0)QPS(0.99)PAQPR s:Phosphorylated S FBXO31 61518.5 1 2 5958.1 15.02 HUMAN 1 4.127 14.2021 GPRLVIGSLPAHLSP-p Q8NHG8;S145-p GPRLVIGSLPAHLSP 0.0368254522571921 0.00561574056323572 -0.557 -0.569333333333333 32.8444212795807 32.6192724773081 -0.557 -0.569333333333333 0.000519466890612022 0.000547107605748671 -7.34644920323683 -7.25751347271094 Q8NHG8 ZNRF2 Q8NHG8.S145.p_ZNRF2 Q8NHG8_S145sS151s_2_2_145_151 Q8NHG8 Q8NHG8 E3 ubiquitin-protein ligase ZNRF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.34133.34340.4 13.84 13.84 99 2 2 2 0 657.3402 2466.4096 S145s S151s TMT10 141 (R) LVIGsLPAHLsPHMFGGFK (C) LVIGS(1.0)LPAHLS(1.0)PHMFGGFK K:TMT10,s:Phosphorylated S ZNRF2 24627.8 6 7 1463.1 140.17 HUMAN 1 -32.8444 -32.6193 GPRQAHDSLYRVHMP-p Q9C0H2;S437-p GPRQAHDSLYRVHMP 0.948131958402904 0.0901489754979796 0.0123333333333333 -0.201333333333333 0.460352185379425 13.8296321008093 0.0123333333333333 -0.201333333333333 0.899424640918132 0.0414034747012236 0.132436220409168 -2.66011937618413 Q9C0H2 TTYH3 Q9C0H2.S437.p_TTYH3 Q9C0H2_S437s _1_1_437_437 Q9C0H2 Q9C0H2-4|Q9C0H2-2|Q9C0H2-3 Protein tweety homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5000.5000.2 13.06 13.06 7.847 2 1 1 0 649.8069 1218.6429 S437s TMT10 433 (R) QAHDsLYR (V) QAHDS(0.99)LY(0.0)R s:Phosphorylated S TTYH3 58513.6 2 1 3807.1 42.68 HUMAN 1 0.4604 -13.8296 GPRRPKYSPPRDDDK-p Q14669-3;S1064-p GPRRPKYSPPRDDDK 0.470196127429149 0.275679679101166 -0.195333333333333 0.144333333333333 6.04853339998355 7.37461355127121 -0.195333333333333 0.144333333333333 0.248397179383078 0.183036897098506 -1.29320480877902 1.52599654711875 Q14669 TRIP12 Q14669.3.S1064.p_TRIP12 Q14669-3_S1064s _1_1_1064_1064 Q14669-3 Q14669-3|Q14669-2|Q14669-4 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8526.8945.3 15.28 9.69 6.352 2 1 1 0 839.0985 2435.3134 S1064s TMT10 1063 (K) YsPPRDDDKVDNQAK (S) Y(0.0)S(0.99)PPRDDDKVDNQAK K:TMT10,s:Phosphorylated S TRIP12 227456.1 10 12 234.1 420.47 HUMAN 1 -6.0485 7.3746 GPRVYFQSPPGAAGE-p Q96C90;S32-p GPRVYFQSPPGAAGE 0.856181591614162 0.0330626501105232 0.028 -0.42 1.31280001075178 19.9635331456189 0.028 -0.42 0.739128585768084 0.0100843215556213 0.350599702021678 -3.86751798185522 Q96C90 PPP1R14B Q96C90.S32.p_PPP1R14B Q96C90_S32s _1_1_32_32 Q96C90 Q96C90 Protein phosphatase 1 regulatory subunit 14B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15876.15876.4 22.85 22.85 6.413 2 1 1 0 699.582 2715.3324 S32s TMT10 28 (R) VYFQsPPGAAGEGPGGADDEGPVRR (Q) VY(0.0)FQS(0.99)PPGAAGEGPGGADDEGPVRR s:Phosphorylated S PPP1R14B 16024.8 4 8 2030.2 101.67 HUMAN 1 1.3128 -19.9635 GPRYTNLSYIGEGAY-p P28482;S29-p GPRYTNLSYIGEGAY 0.653813953262521 0.0474314243484607 -0.081 0.26 3.45987013243272 17.7122866291193 -0.081 0.26 0.450830185565631 0.0169344593961398 -0.812364738884019 3.40154113556573 P28482 MAPK1 P28482.S29.p_MAPK1 P28482_S29s _1_1_29_29 P28482 P28482|P28482-2 Mitogen-activated protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32157.32157.3 17.04 17.04 1.306 7 1 1 0 1076.4969 3147.5167 S29s TMT10 25 (R) YTNLsYIGEGAYGMVCSAYDNVNK (V) Y(0.0)T(0.0)NLS(0.99)Y(0.0)IGEGAY(0.0)GMVCS(0.0)AY(0.0)DNVNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAPK1 41788.3 2 1 3319.1 54 HUMAN 1 -3.4599 17.7123 GPSERTLSINEEEPE-p Q8ND30;S329-p GPSERTLSINEEEPE 0.0775649771385732 0.0218856471959778 -0.433 -0.462333333333333 23.7518463974982 22.6832796347501 -0.433 -0.462333333333333 0.00421517257799109 0.00539103357413928 -4.7344463796439 -4.47502871285169 Q8ND30 PPFIBP2 Q8ND30.S329.p_PPFIBP2 Q8ND30_S329s _1_1_329_329 Q8ND30 Q8ND30|Q8ND30-2|Q8ND30-3|E9PP16 Liprin-beta-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19992.19992.3 15.76 15.76 2.402 3 1 1 0 725.6938 2095.0959 S329s TMT10 327 (R) TLsINEEEPEGGFSK (W) T(0.0)LS(0.99)INEEEPEGGFS(0.0)K K:TMT10,s:Phosphorylated S PPFIBP2 99112.4 2 1 1287.1 158.1 HUMAN 1 -23.7518 -22.6833 GPSETNESPAVVLEP-p P18583-5;S182-p GPSETNESPAVVLEP 0.294305276064614 0.00772163250581632 0.159 0.490666666666667 10.0240836574692 30.1590531421064 0.159 0.490666666666667 0.0994469880651973 0.000964039182548127 1.98589492767287 6.47033462662506 P18583 SON P18583.5.S182.p_SON P18583-5_S182s _1_1_182_182 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-2|P18583-6|P18583-8 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33415.33415.5 20.64 20.64 3.672 7 1 1 0 960.3137 4717.5617 S182s TMT10 173 (R) AFGPSETNEsPAVVLEPPVVSMEVSEPHILETLKPATK (T) AFGPS(0.0)ET(0.0)NES(0.99)PAVVLEPPVVS(0.0)MEVS(0.0)EPHILET(0.0)LKPAT(0.0)K K:TMT10,s:Phosphorylated S SON 267429.6 4 7 45.1 778.56 HUMAN 1 10.0241 30.1591 GPSGPSESPKAASDI-p Q96JM3;S507-p GPSGPSESPKAASDI 0.373235049738538 0.0193383719151726 -0.234 -0.928 7.93270744003959 23.5442713401227 -0.234 -0.928 0.160964185371576 0.00442153295193135 -1.62348493554917 -4.67888281968711 Q96JM3 CHAMP1 Q96JM3.S507.p_CHAMP1 Q96JM3_S507s _1_1_507_507 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21018.21018.5 16.71 10.03 2.64 6 1 1 0 811.6448 3974.2197 S507s TMT10 482 (K) SSFFIEPQKPVFPETRKPGPSGPSEsPK (A) S(0.0)S(0.0)FFIEPQKPVFPET(0.0)RKPGPS(0.0)GPS(0.0)ES(0.99)PK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 11 30 25.1 950.05 HUMAN 1 -7.9327 -23.5443 GPSLDIDTPDVNIEG-p Q09666;T4430-p GPSLDIDTPDVNIEG 0.686138350127353 0.132734513185165 -0.0666666666666667 0.236333333333333 3.07035592100395 11.5597040473782 -0.0666666666666667 0.236333333333333 0.493133388124153 0.06982799871712 -0.734666506988935 2.25339668806188 Q09666 AHNAK Q09666.T4430.p_AHNAK Q09666_T4430t_1_1_4430_4430 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26710.26710.5 17.97 17.97 5.78 2 1 1 0 869.6707 4263.3418 T4430t N4434n TMT10 4410 (K) VEGDLKGPEIDIKGPSLDIDtPDVnIEGPEGK (L) VEGDLKGPEIDIKGPS(0.0)LDIDT(0.99)PDVN(1.0)IEGPEGK K:TMT10,t:Phosphorylated T,n:Deamidated AHNAK 629603.7 2 97 1.1 4313.36 HUMAN 1 -3.0704 11.5597 GPSLKMPSLEISAPK-p Q09666;S4908-p GPSLKMPSLEISAPK 0.168210601929357 0.804486334818597 -0.299333333333333 0.0423333333333333 15.4516572493024 1.32261674143362 -0.299333333333333 0.0423333333333333 0.0284993053858828 0.73745975683754 -2.96359691921921 0.352917786889996 Q09666 AHNAK Q09666.S4908.p_AHNAK Q09666_S4908s _1_1_4908_4908 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26758.26758.4 13.43 13.43 2.104 4 1 1 0 631.3633 2442.4609 S4908s TMT10 4899 (K) LSGPSLKMPsLEISAPK (V) LS(0.0)GPS(0.0)LKMPS(0.99)LEIS(0.0)APK K:TMT10,s:Phosphorylated S AHNAK 629603.7 7 108 1.1 4313.36 HUMAN 1 -15.4517 1.3226 GPSLPARSPSPPRRR-p Q8IY33;S658-p GPSLPARSPSPPRRR 0.738063726775209 0.605272755117461 0.0963333333333333 -0.0606666666666666 2.50173773799873 2.95891113417647 0.0963333333333333 -0.0606666666666667 0.56211636115041 0.505951498576275 0.617256285034897 -0.711955117517019 Q8IY33 MICALL2 Q8IY33.S658.p_MICALL2 Q8IY33_S658sS660s_2_2_658_660 Q8IY33 Q8IY33|Q8IY33-5|Q8IY33-3 MICAL-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9547.9547.4 9.82 9.82 5.901 5 2 2 0 604.3055 2254.2618 S658s S660s TMT10 644 (R) TPRPASPGPSLPARsPsPPR (R) T(0.0)PRPAS(0.0)PGPS(0.0)LPARS(0.99)PS(0.99)PPR s:Phosphorylated S MICALL2 98299.3 2 29 387.1 332.82 HUMAN 1 2.5017 -2.9589 GPSNPRKSVSSPTSS-p Q5M775;S131-p GPSNPRKSVSSPTSS 0.363766246899953 0.96400258798258 -0.19 0.0123333333333334 8.15130455054548 0.226978277192969 -0.19 0.0123333333333334 0.153062761678276 0.949078581043901 -1.66139816106341 0.0668742062339366 Q5M775 SPECC1 Q5M775.S131.p_SPECC1 Q5M775_S131s _1_1_131_131 Q5M775 Q5M775|Q5M775-4|Q5M775-2|Q5M775-3|Q5M775-5 Cytospin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9883.9883.3 11.21 9.25 1.182 9 1 1 0 677.0127 1949.0592 S131s TMT10 131 (K) sVSSPTSSNTPTPTK (H) S(0.99)VS(0.0)S(0.0)PT(0.0)S(0.0)S(0.0)NT(0.0)PT(0.0)PT(0.0)K K:TMT10,s:Phosphorylated S SPECC1 119267.5 1 3 330.1 358.68 HUMAN 1 -8.1513 0.227 GPSPAAASPEGSPLR-p Q9P107;S919-p GPSPAAASPEGSPLR 0.9799456516966 0.050709757043342 0.00399999999999999 -0.233 0.174863795173947 17.2988024450972 0.00399999999999999 -0.233 0.960535942550146 0.0186260067278928 0.0518139207177246 -3.31913524967123 Q9P107 GMIP Q9P107.S919.p_GMIP Q9P107_S919s _1_1_919_919 Q9P107 Q9P107|Q9P107-2 GEM-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7514.7514.3 14.79 14.79 2.614 3 1 1 0 639.3242 1835.9925 S919s TMT10 910 (R) GRGPSPAAAsPEGSPLR (R) GRGPS(0.0)PAAAS(0.99)PEGS(0.0)PLR s:Phosphorylated S GMIP 107650.9 5 9 1251.1 161.9 HUMAN 1 0.1749 -17.2988 GPSPGDGSPPKPKDP-p Q68EM7;S575-p GPSPGDGSPPKPKDP 0.565909189704471 0.305889744794622 0.082 0.156666666666667 4.55352687140344 6.79638961775493 0.082 0.156666666666667 0.350467146736503 0.209103372924236 1.02156465706306 1.42494081665251 Q68EM7 ARHGAP17 Q68EM7.S575.p_ARHGAP17 Q68EM7_S575s _1_1_575_575 Q68EM7 Q68EM7|Q68EM7-5|Q68EM7-6|Q68EM7-3|Q68EM7-7 Rho GTPase-activating protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19609.19609.4 21.64 21.64 2.151 9 1 1 0 1205.8751 4740.5048 S575s TMT10 549 (R) AESSSGGGTVPSSAGILEQGPSPGDGsPPKPKDPVSAAVPAPGR (N) AES(0.0)S(0.0)S(0.0)GGGT(0.0)VPS(0.0)S(0.0)AGILEQGPS(0.0)PGDGS(0.99)PPKPKDPVS(0.0)AAVPAPGR K:TMT10,s:Phosphorylated S ARHGAP17 95834.3 8 1 2036.1 101.4 HUMAN 1 4.5535 6.7964 GPSPQFQSPPAKQTS-p P56945-6;S185-p GPSPQFQSPPAKQTS 0.822366371065592 0.0324563954685826 -0.0416666666666667 -0.279 1.63458598361607 20.0879799420371 -0.0416666666666667 -0.279 0.686343304946012 0.00979945686980594 -0.426266645691155 -3.89419286405261 P56945 BCAR1 P56945.6.S185.p_BCAR1 P56945-6_S185s _1_1_185_185 P56945-6 P56945-6|P56945-2 Isoform 6 of Breast cancer anti-estrogen resistance protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20987.20987.3 20.31 20.31 1.695 3 1 1 0 921.8162 2683.4608 S185s TMT10 169 (K) AQQGLYQVPGPSPQFQsPPAK (Q) AQQGLY(0.0)QVPGPS(0.0)PQFQS(0.99)PPAK K:TMT10,s:Phosphorylated S BCAR1 98217.4 1 1 1150.1 172.39 HUMAN 1 -1.6346 -20.088 GPSPQRMTPPKQMLS-p Q14686;T678-p GPSPQRMTPPKQMLS 0.863512578300451 0.148122783697224 -0.0286666666666667 0.179 1.24300255401335 10.9208070336133 -0.0286666666666667 0.179 0.751103428890267 0.080894556180393 -0.333769375283105 2.14128372111644 Q14686 NCOA6 Q14686.T678.p_NCOA6 Q14686_T678t_1_1_678_678 Q14686 Q14686|F6M2K2|F6M2K4 Nuclear receptor coactivator 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22291.22291.4 8.76 8.76 1.469 3 1 1 0 925.7217 3618.8781 N664n T678t TMT10 653 (R) AQLMPQGQMMVnPPSQNLGPSPQRMtPPK (Q) AQLMPQGQMMVN(0.99)PPS(0.0)QN(0.0)LGPS(0.0)PQRMT(0.99)PPK K:TMT10,n:Deamidated,t:Phosphorylated T NCOA6 219484.1 3 1 327.1 360.02 HUMAN 1 -1.243 10.9208 GPSQRLGTPKSVNKA-p Q15398;T639-p GPSQRLGTPKSVNKA 0.964030867224484 0.0107297167154974 -0.012 -0.586 0.306497657593397 27.6128553254127 -0.012 -0.586 0.931859064814612 0.00173266446046584 -0.0895591113147282 -5.72930693511955 Q15398 DLGAP5 Q15398.T639.p_DLGAP5 Q15398_T639tS642s_2_2_639_642 Q15398 Q15398|Q15398-3|Q15398-1 Disks large-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13101.13101.3 7.38 4.41 99 2 2 2 0 597.6646 1631.0459 T639t S642s TMT10 637 (R) LGtPKsVNK (A) LGT(1.0)PKS(1.0)VNK K:TMT10,t:Phosphorylated T,s:Phosphorylated S DLGAP5 95797.9 2 15 355.1 348.78 HUMAN 1 -0.3065 -27.6129 GPSQSPRSPKHTRPA-p Q9P1Y5;S780-p GPSQSPRSPKHTRPA 0.843642878291984 0.780962525889439 0.03 -0.0276666666666667 1.42962158204562 1.48614310607362 0.03 -0.0276666666666667 0.719511669169128 0.710208211566691 0.378424330192936 -0.391696504955055 Q9P1Y5 CAMSAP3 Q9P1Y5.S780.p_CAMSAP3 Q9P1Y5_S780s _1_1_780_780 Q9P1Y5 Q9P1Y5-2 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.3720.3720.4 14.34 14.34 2.552 4 1 1 0 519.0306 1993.1343 S780s TMT10 768 (R) RSPGPGPSQSPRsPK (H) RS(0.0)PGPGPS(0.0)QS(0.0)PRS(0.99)PK K:TMT10,s:Phosphorylated S CAMSAP3 135546 7 17 217.1 432.4 HUMAN 1 1.4296 -1.4861 GPSRHKMSPPPSGFG-p Q8IY67-2;S617-p GPSRHKMSPPPSGFG 0.495203692330295 0.281166559419022 0.118666666666667 0.132333333333333 5.62154400152895 7.26161720964129 0.118666666666667 0.132333333333333 0.274059966211423 0.187861713407649 1.21683872036203 1.5063028099248 Q8IY67 RAVER1 Q8IY67.2.S617.p_RAVER1 Q8IY67-2_S617s _1_1_617_617 Q8IY67-2 E9PAU2|Q8IY67-2|A0A087WZ13 Isoform 2 of Ribonucleoprotein PTB-binding 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8287.8901.4 14.52 11.28 2.307 2 1 1 0 492.0009 1885.0155 S617s TMT10 614 (R) HKMsPPPSGFGER (S) HKMS(0.99)PPPS(0.0)GFGER K:TMT10,s:Phosphorylated S RAVER1 78371.6 29 7 785.1 225.39 HUMAN 1 5.6215 7.2616 GPSRRCDSDCLWVGL-p Q92466;S50-p GPSRRCDSDCLWVGL 0.825157658635187 0.196285915879269 0.0336666666666667 0.127666666666667 1.60804263781955 9.30057472386185 0.0336666666666667 0.127666666666667 0.690550964549856 0.117474208508875 0.42013767103561 1.85971359593902 Q92466 DDB2 Q92466.S50.p_DDB2 Q92466_S50s _1_1_50_50 Q92466 Q92466|Q92466-4|Q92466-5|Q92466-2|Q92466-3 DNA damage-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27867.27867.3 16.8 16.8 99 1 1 1 0 927.1001 2699.3417 S50s TMT10 47 (R) RCDsDCLWVGLAGPQILPPCR (S) RCDS(1.0)DCLWVGLAGPQILPPCR C:Carbamidomethylation,s:Phosphorylated S DDB2 48490.7 1 2 1930.1 106.36 HUMAN 1 1.608 9.3006 GPSSAPATPTKAPYS-p Q96JH7;T761-p GPSSAPATPTKAPYS 0.247049795569645 0.0214728513781524 -0.195 -0.481333333333333 11.5966209414792 22.8087425784028 -0.195 -0.481333333333333 0.0692369464295445 0.00523752057627664 -2.26098386438699 -4.50436865377135 Q96JH7 VCPIP1 Q96JH7.T761.p_VCPIP1 Q96JH7_T761t _1_1_761_761 Q96JH7 Q96JH7 Deubiquitinating protein VCIP135 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12142.12142.4 9.97 9.97 1.868 9 1 1 0 707.8732 2748.5023 T761t TMT10 753 (R) DGPSSAPAtPTKAPYSPTTSK (E) DGPS(0.0)S(0.0)APAT(0.99)PT(0.0)KAPY(0.0)S(0.0)PT(0.0)T(0.0)S(0.0)K K:TMT10,t:Phosphorylated T VCPIP1 135687.4 2 3 725.1 236.71 HUMAN 1 -11.5966 -22.8087 GPSSSLLSLPGLKSR-p Q4KMP7;S661-p GPSSSLLSLPGLKSR 0.455840880261612 0.248865964097456 0.104333333333333 0.138333333333333 6.29217767860284 7.95785493119815 0.104333333333333 0.138333333333333 0.234845494208084 0.160034827801152 1.33645020114271 1.62733575265899 Q4KMP7 TBC1D10B Q4KMP7.S661.p_TBC1D10B Q4KMP7_S661s _1_1_661_661 Q4KMP7 Q4KMP7|Q4KMP7-2 TBC1 domain family member 10B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30719.30926.3 13.08 8.98 1.597 4 1 1 0 710.0594 2048.1953 S661s Hydrogen 649 (R) QQPPLGPSSSLLsLPGLK (S) QQPPLGPS(0.0)S(0.0)S(0.0)LLS(0.99)LPGLK K:TMT10-Lys-Only,s:Phosphorylated S TBC1D10B 87710.7 5 9 462.1 304.34 HUMAN 1 6.2922 7.9579 GPSSSLNTPGSFRRG-p Q9NXR1;T228-p GPSSSLNTPGSFRRG 0.102728705875057 0.0208880914783095 0.483333333333333 -0.346666666666667 20.8931353346381 22.979334081275 0.483333333333333 -0.346666666666667 0.00814116330721446 0.00503577818194046 4.07330287929842 -4.54445987164628 Q9NXR1 NDE1 Q9NXR1.T228.p_NDE1 Q9NXR1_T228t _1_1_228_228 Q9NXR1 Q9NXR1|Q9NXR1-2 Nuclear distribution protein nudE homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8355.8355.3 9.07 9.07 3.101 5 1 1 0 591.2963 1691.9026 T228t TMT10 221 (R) GPSSSLNtPGSFRR (G) GPS(0.0)S(0.0)S(0.0)LNT(0.99)PGS(0.0)FRR t:Phosphorylated T NDE1 38864.4 1 2 2022.1 102 HUMAN 1 20.8931 -22.9793 GPSTPTGTLEFEGGE-p Q09666;T5798-p GPSTPTGTLEFEGGE 0.481005429235313 0.897527952892483 -0.105333333333333 -0.0146666666666666 5.8498783734262 0.657333487974841 -0.105333333333333 -0.0146666666666667 0.260023238309289 0.859541106661193 -1.25777412955297 -0.185550572715863 Q09666 AHNAK Q09666.T5798.p_AHNAK Q09666_T5798t _1_1_5798_5798 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23542.23542.4 12.01 12.01 1.145 9 1 1 0 993.9615 3892.8765 T5798t TMT10 5780 (R) SNSFSDEREFSGPSTPTGtLEFEGGEVSLEGGK (V) S(0.0)NS(0.0)FS(0.0)DEREFS(0.0)GPS(0.0)T(0.0)PT(0.0)GT(0.99)LEFEGGEVS(0.0)LEGGK K:TMT10,t:Phosphorylated T AHNAK 629603.7 8 161 1.1 4313.36 HUMAN 1 -5.8499 -0.6573 GPSTSRSSPNKRGPP-p O14578-4;S1962-p GPSTSRSSPNKRGPP 0.191102046396083 0.124684577081863 0.307333333333333 -0.205666666666667 14.0379342497583 11.9255326124858 0.307333333333333 -0.205666666666667 0.0394644972912981 0.06418694987318 2.69988594357921 -2.31798495073295 O14578 CIT O14578.4.S1962.p_CIT O14578-4_S1962s _1_1_1962_1962 O14578-4 O14578-4 Isoform 4 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3686.3686.3 11.19 4.63 1.4 5 1 1 0 552.6235 1575.8855 S1962s TMT10 1955 (R) GPSTSRSsPNK (R) GPS(0.0)T(0.0)S(0.0)RS(0.0)S(0.99)PNK K:TMT10,s:Phosphorylated S CIT 238656.7 4 16 366.1 342.11 HUMAN 1 14.0379 -11.9255 GPTHREPSPVRYDNL-p Q9C0B5;S529-p GPTHREPSPVRYDNL 0.481732860388529 0.4327885548442 0.11 -0.0903333333333333 5.83639588909552 4.84565085125649 0.11 -0.0903333333333333 0.260831723509302 0.32766866737509 1.25536350517265 -1.07548371623587 Q9C0B5 ZDHHC5 Q9C0B5.S529.p_ZDHHC5 Q9C0B5_S529s _1_1_529_529 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8672.8878.3 12.01 12.01 2.553 3 1 1 0 651.3491 1872.0653 S529s TMT10 518 (R) LVPTGPTHREPsPVR (Y) LVPT(0.0)GPT(0.0)HREPS(0.99)PVR s:Phosphorylated S ZDHHC5 78285 5 15 134.1 530.74 HUMAN 1 5.8364 -4.8457 GPTLLPGTPARKRGN-p Q08426;T548-p GPTLLPGTPARKRGN 0.264726642977841 0.854974404888747 0.159333333333333 -0.0183333333333333 10.9476813013586 0.959442938549426 0.159333333333333 -0.0183333333333333 0.0803955239399396 0.801780899736278 2.14694603295003 -0.263648117515631 Q08426 EHHADH Q08426.T548.p_EHHADH Q08426_T548t _1_1_548_548 Q08426 Q08426|Q08426-2 Peroxisomal bifunctional enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19556.19556.3 15.2 14.56 2.37 3 1 1 0 615.6658 1765.0169 T548t TMT10 536 (K) GQGLTGPTLLPGtPAR (K) GQGLT(0.0)GPT(0.0)LLPGT(0.99)PAR t:Phosphorylated T EHHADH 80121 4 3 2380.1 85.83 HUMAN 1 10.9477 -0.9594 GPTQPPLSLSPAPET-p J3KNL6;S2081-p GPTQPPLSLSPAPET 0.306383440584975 0.253614874155436 0.251 -0.213 9.62464994821018 7.84690961254187 0.251 -0.213 0.109027236741668 0.164175761267128 1.91656654569739 -1.60809237250274 J3KNL6 SEC16A J3KNL6.S2081.p_SEC16A J3KNL6_S2081sS2083s_2_2_2081_2083 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15994.15994.4 7.46 7.46 7.457 5 2 2 0 862.954 3288.8519 S2081s S2083s TMT10 2071 (R) ADSGPTQPPLsLsPAPETKRPGQAAK (K) ADS(0.0)GPT(0.0)QPPLS(0.99)LS(0.99)PAPET(0.0)KRPGQAAK K:TMT10,s:Phosphorylated S SEC16A 253486.5 3 54 15.1 1143.82 HUMAN 1 9.6246 -7.8469 GPTSGPQSAPQIYGP-p Q96RT1-8;S967-p GPTSGPQSAPQIYGP 0.5553716502212 0.133883307577925 -0.0926666666666667 0.163 4.71674912251751 11.5109556159283 -0.0926666666666667 0.163 0.337539876961171 0.070616215416481 -1.05188555202646 2.24481294901954 Q96RT1 ERBB2IP Q96RT1.8.S967.p_ERBB2IP Q96RT1-8_S967s_1_1_967_967 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-6|Q96RT1-7 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22604.22604.4 12.95 12.95 1.175 9 1 1 0 883.9465 3451.7898 S967s N978n TMT10 960 (R) GPTSGPQsAPQIYGPPQYnIQYSSSAAVK (D) GPT(0.0)S(0.0)GPQS(0.99)APQIY(0.0)GPPQY(0.0)N(1.0)IQY(0.0)S(0.0)S(0.0)S(0.0)AAVK K:TMT10,s:Phosphorylated S,n:Deamidated ERBIN 159762.8 2 17 81.1 633.5 HUMAN 1 -4.7167 11.511 GPTSLRVSWQEPRCE-p P16144;S1547-p GPTSLRVSWQEPRCE 0.644876258282903 0.154486861825281 -0.073 0.208333333333333 3.56549130378217 10.6659066018279 -0.073 0.208333333333333 0.439998169401829 0.0857846018284042 -0.833104871614577 2.09676440819572 P16144 ITGB4 P16144.S1547.p_ITGB4 P16144_S1547s _1_1_1547_1547 P16144 P16144|P16144-3|P16144-2|P16144-4 Integrin beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30906.30906.3 10.38 10.38 1.108 4 1 1 0 818.104 2372.3288 S1547s TMT10 1534 (R) LVFSALGPTSLRVsWQEPR (C) LVFS(0.0)ALGPT(0.0)S(0.0)LRVS(0.99)WQEPR s:Phosphorylated S ITGB4 205872.1 2 10 708.1 238.91 HUMAN 1 -3.5655 10.6659 GPVENGVSDQEGEEQ-p Q8TEQ6;S778-p GPVENGVSDQEGEEQ 0.505331441375725 0.0882363971985032 -0.113 0.187333333333333 5.47266037459688 13.9563415144196 -0.113 0.187333333333333 0.283618112569731 0.0402129420999962 -1.1900137827796 2.68330263836114 Q8TEQ6 GEMIN5 Q8TEQ6.S778.p_GEMIN5 Q8TEQ6_S778s _1_1_778_778 Q8TEQ6 Q8TEQ6 Gem-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16841.16841.5 34.26 34.26 13.732 5 1 1 0 957.858 4705.299 S778s TMT10 751 (R) TPVKLESIDGNEEESMKENSGPVENGVsDQEGEEQAR (E) T(0.0)PVKLES(0.0)IDGNEEES(0.0)MKENS(0.0)GPVENGVS(0.99)DQEGEEQAR K:TMT10,s:Phosphorylated S GEMIN5 170925.5 12 6 798.1 223.37 HUMAN 1 -5.4727 13.9563 GPVKKTRSIGSAVDQ-p Q9H0H5;S203-p GPVKKTRSIGSAVDQ 0.437144947936803 0.342385657700889 0.107 0.0936666666666667 6.61888929604557 6.1653829100826 0.107 0.0936666666666667 0.217826679075533 0.241803013491368 1.39412262044142 1.31365152689434 Q9H0H5 RACGAP1 Q9H0H5.S203.p_RACGAP1 Q9H0H5_S203s _1_1_203_203 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18482.18482.3 16.8 13.59 2.163 3 1 1 0 705.0374 2033.1279 S203s TMT10 203 (R) sIGSAVDQGNESIVAK (T) S(0.99)IGS(0.0)AVDQGNES(0.0)IVAK K:TMT10,s:Phosphorylated S RACGAP1 71709.9 6 5 574.1 268.64 HUMAN 1 6.6189 6.1654 GPVKLGGTPPADGKR-p Q96C00;T376-p GPVKLGGTPPADGKR 0.810035198209422 0.00509044708762926 -0.038 -0.573 1.75660529504318 33.3872251342568 -0.038 -0.573 0.667328188954567 0.000458434703800813 -0.454199437215148 -7.51894053940151 Q96C00 ZBTB9 Q96C00.T376.p_ZBTB9 Q96C00_T376t _1_1_376_376 Q96C00 Q96C00 Zinc finger and BTB domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7943.7943.3 9.58 9.58 99 1 1 1 0 536.2956 1526.9055 T376t TMT10 373 (K) LGGtPPADGKR (F) LGGT(1.0)PPADGKR K:TMT10,t:Phosphorylated T ZBTB9 51285.9 2 1 5858.1 15.8 HUMAN 1 -1.7566 -33.3872 GPVLLHPSPSTTQAA-p Q9BV73;S2433-p GPVLLHPSPSTTQAA 0.696753143120369 0.173251703388099 0.0696666666666667 -0.168333333333333 2.94995668751073 10.0099620421136 0.0696666666666667 -0.168333333333333 0.506995764553341 0.0997708783885258 0.710229480492424 -1.98263859719538 Q9BV73 CEP250 Q9BV73.S2433.p_CEP250 Q9BV73_S2433s _1_1_2433_2433 Q9BV73 Q9BV73|Q9BV73-2 Centrosome-associated protein CEP250 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22569.22569.4 20.12 17.35 1.595 10 1 1 0 864.6965 3375.807 S2433s TMT10 2413 (R) RLDESLTQSLTSPGPVLLHPsPSTTQAASR (-) RLDES(0.0)LT(0.0)QS(0.0)LT(0.0)S(0.0)PGPVLLHPS(0.99)PS(0.0)T(0.0)T(0.0)QAAS(0.0)R s:Phosphorylated S CEP250 282045.1 1 9 1169.1 170.36 HUMAN 1 2.95 -10.01 GPVRLHSSNPNLSTL-p Q9H4L5-2;S273-p GPVRLHSSNPNLSTL 0.732725172885021 0.596255650817582 0.052 0.0546666666666667 2.55640906859196 3.04045697664183 0.052 0.0546666666666667 0.555084490718534 0.496540071384509 0.628778329052227 0.728514610281176 Q9H4L5 OSBPL3 Q9H4L5.2.S273.p_OSBPL3 Q9H4L5-2_S273s _1_1_273_273 Q9H4L5-2 Q9H4L5|Q9H4L5-2|Q9H4L5-3|Q9H4L5-4|Q9H4L5-5|Q9H4L5-6|Q9H4L5-7|Q9H4L5-8 Isoform 1b of Oxysterol-binding protein-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20222.20222.2 15.66 15.66 1.333 4 1 1 0 1213.6042 2346.2342 S273s TMT10 270 (R) LHSsNPNLSTLDFGEEK (N) LHS(0.0)S(0.99)NPNLS(0.0)T(0.0)LDFGEEK K:TMT10,s:Phosphorylated S OSBPL3 98654.8 11 10 683.1 244.57 HUMAN 1 2.5564 3.0405 GPVVPGPSPIPSVTE-p P49454;S3007-p GPVVPGPSPIPSVTE 0.698366744053494 0.00234487199305355 0.053 -0.72 2.93006821522924 40.4418682592934 0.053 -0.72 0.509322870990257 9.03260823043679e-05 0.706172218339377 -10.3319080741155 P49454 CENPF P49454.S3007.p_CENPF P49454_S3007s _1_1_3007_3007 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29526.29526.3 15.6 15.6 6.129 4 1 1 0 856.1481 2486.4634 S3007s TMT10 2995 (R) GSPLLGPVVPGPsPIPSVTEK (R) GS(0.0)PLLGPVVPGPS(0.99)PIPS(0.0)VT(0.0)EK K:TMT10,s:Phosphorylated S CENPF 371067.2 1 27 47.1 771.73 HUMAN 1 2.9301 -40.4419 GPVVRAFSEDEALAQ-p Q9C0H5-2;S604-p GPVVRAFSEDEALAQ 0.170677699585152 0.0190433095105341 0.267 -0.464666666666667 15.3219828408122 23.6579372294586 0.267 -0.464666666666667 0.0293630872723346 0.00430731146488629 2.93906030817154 -4.70624124688952 Q9C0H5 ARHGAP39 Q9C0H5.2.S604.p_ARHGAP39 Q9C0H5-2_S604s _1_1_604_604 Q9C0H5-2 Q9C0H5-2 Isoform 2 of Rho GTPase-activating protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15068.15068.3 15.08 15.08 99 1 1 1 0 639.6235 1836.8925 S604s TMT10 602 (R) AFsEDEALAQQENR (H) AFS(1.0)EDEALAQQENR s:Phosphorylated S ARHGAP39 126053.9 1 12 910.1 201.84 HUMAN 1 15.322 -23.6579 GPWTKAVTPPVKDDN-p Q5VT06;T878-p GPWTKAVTPPVKDDN 0.223329192805893 0.394759442902435 0.305333333333333 0.0806666666666667 12.5116791860725 5.36503519116034 0.305333333333333 0.0806666666666667 0.05608310905137 0.290734440095068 2.42343508406545 1.17030050721597 Q5VT06 CEP350 Q5VT06.T878.p_CEP350 Q5VT06_T878t _1_1_878_878 Q5VT06 Q5VT06 Centrosome-associated protein 350 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16771.16976.3 16.12 9.93 4.426 2 1 1 0 800.0739 2318.2392 T878t TMT10 876 (K) AVtPPVKDDNEDVFSAR (I) AVT(0.99)PPVKDDNEDVFS(0.0)AR K:TMT10,t:Phosphorylated T CEP350 352521.4 2 4 265.1 395.34 HUMAN 1 12.5117 5.365 GPYGGGNYGPGGSGG-p P22626;Y336-p GPYGGGNYGPGGSGG 0.0360961121648541 0.867048566703714 0.726666666666667 -0.0443333333333333 33.0760570121447 0.87202439861139 0.726666666666667 -0.0443333333333333 0.000492486464431039 0.818083361950419 7.42543165852874 -0.241438282770132 P22626 HNRNPA2B1 P22626.Y336.p_HNRNPA2B1 P22626_Y336y _1_1_336_336 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12729.12823.3 35.21 35.21 7.417 5 1 1 0 833.6845 2419.0683 Y336y TMT10 326 (R) NMGGPYGGGNyGPGGSGGSGGYGGR (S) NMGGPY(0.0)GGGNY(0.99)GPGGS(0.0)GGS(0.0)GGY(0.0)GGR y:Phosphorylated Y HNRNPA2B1 37486.1 6 6 2.1 134.47 HUMAN 1 33.0761 -0.872 GPYHIGGSPFKAKVT-p P21333-2;S2502-p GPYHIGGSPFKAKVT 0.387370777933455 0.0584454148473786 -0.160666666666667 -0.544333333333333 7.61582858068902 16.426166150082 -0.160666666666667 -0.544333333333333 0.173147865431117 0.022771067202179 -1.56843706666074 -3.1481540419576 P21333 FLNA P21333.2.S2502.p_FLNA P21333-2_S2502s _1_1_2502_2502 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54|A0A087WWY3 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17449.17449.3 17.57 13.26 6.605 3 1 1 0 639.9921 1838.0001 S2502s TMT10 2493 (K) YGGPYHIGGsPFK (A) Y(0.0)GGPY(0.0)HIGGS(0.99)PFK K:TMT10,s:Phosphorylated S FLNA 282751.6 2 21 198.1 454.47 HUMAN 1 -7.6158 -16.4262 GQAAAGGSGNLLTER-p Q99959;S329-p GQAAAGGSGNLLTER 0.781783194314642 0.503941009454588 0.039 0.077 2.05205527366192 3.98734673342805 0.039 0.0770000000000001 0.623439726393102 0.399268756003015 0.520299439285196 0.91455561212002 Q99959 PKP2 Q99959.S329.p_PKP2 Q99959_S329s _1_1_329_329 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15103.15103.3 23.52 23.52 3.442 3 1 1 0 744.7145 2152.1672 S329s TMT10 317 (R) AHLTVGQAAAGGsGNLLTER (S) AHLT(0.0)VGQAAAGGS(0.99)GNLLT(0.0)ER s:Phosphorylated S PKP2 97926.6 6 17 257.1 399.17 HUMAN 1 2.0521 3.9873 GQAASDNSGPEDAKR-p Q5JPE7;S1205-p GQAASDNSGPEDAKR 0.952670764222205 0.0957606999027242 -0.0116666666666667 -0.236666666666667 0.415945694364729 13.4731629555051 -0.0116666666666667 -0.236666666666667 0.908668411180983 0.0449452400642109 -0.120191026198181 -2.59520188024475 Q5JPE7 NOMO2 Q5JPE7.S1205.p_NOMO2 Q5JPE7_S1205s _1_1_1205_1205 Q5JPE7 Q5JPE7|J3KN36|Q5JPE7-2|P69849|Q5JPE7-3|A0A087WTD5 Nodal modulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16463.16463.3 13.18 13.18 1.245 2 1 1 0 893.787 2599.384 S1205s TMT10 1191 (R) LQGVGALGQAASDNsGPEDAKR (Q) LQGVGALGQAAS(0.0)DNS(0.99)GPEDAKR K:TMT10,s:Phosphorylated S NOMO2 140520.4 5 1 3669.1 45.62 HUMAN 1 -0.4159 -13.4732 GQAEVFGSDDDHIQF-p Q9Y6Y0;S246-p GQAEVFGSDDDHIQF 0.519493528894629 0.675961595961611 -0.128666666666667 -0.0443333333333333 5.2529921733933 2.32437259528976 -0.128666666666667 -0.0443333333333333 0.298332647814363 0.585548321608928 -1.15022469503513 -0.579424449333005 Q9Y6Y0 IVNS1ABP Q9Y6Y0.S246.p_IVNS1ABP Q9Y6Y0_S246s _1_1_246_246 Q9Y6Y0 Q9Y6Y0 Influenza virus NS1A-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.31800.31800.4 23.71 23.71 99 1 1 1 0 853.6801 3331.7211 S246s TMT10 231 (K) LLDGNLLDGQAEVFGsDDDHIQFVQK (K) LLDGNLLDGQAEVFGS(1.0)DDDHIQFVQK K:TMT10,s:Phosphorylated S IVNS1ABP 72983.3 6 1 2117.1 96.92 HUMAN 1 -5.253 -2.3244 GQAPAEASPPPIAPK-p Q53SF7;S1023-p GQAPAEASPPPIAPK 0.0576036189507777 0.0272277284827704 -0.456666666666667 -0.292666666666667 27.0940635983041 21.2283733844898 -0.456666666666667 -0.292666666666667 0.00195251167840926 0.00753637779928027 -5.59444893570411 -4.14348832952456 Q53SF7 COBLL1 Q53SF7.S1023.p_COBLL1 Q53SF7_S1023s _1_1_1023_1023 Q53SF7 A0A0D9SG04|Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25160.25160.4 26 26 10.784 6 1 1 0 1105.848 4340.3956 S1023s TMT10 1010 (K) TDDDVIGQAPAEAsPPPIAPKPVTIPASQVSTQNLK (T) T(0.0)DDDVIGQAPAEAS(0.99)PPPIAPKPVT(0.0)IPAS(0.0)QVS(0.0)T(0.0)QNLK K:TMT10,s:Phosphorylated S COBLL1 132526.1 3 21 163.1 494.83 HUMAN 1 -27.0941 -21.2284 GQARSSCSPGGRTPA-p B7ZM99;S62-p GQARSSCSPGGRTPA 0.808207657413422 0.0961357143238647 -0.0406666666666667 -0.266666666666667 1.77611905015445 13.4492625608782 -0.0406666666666667 -0.266666666666667 0.664336470728393 0.0451932676766564 -0.458630665374367 -2.59086491593654 B7ZM99 MTHFD1L B7ZM99.S62.p_MTHFD1L B7ZM99_S62s _1_1_62_62 B7ZM99 B7ZM99|Q6UB35|Q6UB35-2 MTHFD1L protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3524.3524.3 8.31 7.2 2.164 4 1 1 0 538.2543 1532.7801 S62s TMT10 59 (R) SSCsPGGRTPAAR (D) S(0.0)S(0.0)CS(0.99)PGGRT(0.0)PAAR C:Carbamidomethylation,s:Phosphorylated S MTHFD1L 106800 1 2 5226.1 21.55 HUMAN 1 -1.7761 -13.4493 GQAWGRQSPRRLEDS-p Q16584;S548-p GQAWGRQSPRRLEDS 0.696763497782915 0.0770565683209836 -0.0586666666666667 -0.332666666666667 2.94914715175725 14.7691982564766 -0.0586666666666666 -0.332666666666667 0.507090278637782 0.0333487971717955 -0.71006445044532 -2.83346100313779 Q16584 MAP3K11 Q16584.S548.p_MAP3K11 Q16584_S548s _1_1_548_548 Q16584 Q16584|Q16584-2 Mitogen-activated protein kinase kinase kinase 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18144.18144.3 15.57 11.05 99 1 1 1 0 800.7397 2320.2359 S548s TMT10 532 (R) AIQLEPAEPGQAWGRQsPR (R) AIQLEPAEPGQAWGRQS(1.0)PR s:Phosphorylated S MAP3K11 93313.9 3 6 536.1 278.53 HUMAN 1 -2.9491 -14.7692 GQDAIAQSPEKESKD-p Q9NWH9;S289-p GQDAIAQSPEKESKD 0.421053324853859 0.55898441697083 -0.137333333333333 0.0596666666666667 6.92532852993372 3.40681266161176 -0.137333333333333 0.0596666666666667 0.202986496123692 0.45637172966556 -1.44793593312389 0.801774157435963 Q9NWH9 SLTM Q9NWH9.S289.p_SLTM Q9NWH9_S289s _1_1_289_289 Q9NWH9 Q9NWH9 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12092.12092.3 20.61 20.61 11.795 4 1 1 0 1104.588 3231.7879 S289s TMT10 271 (K) ITDSEASKPKDGQDAIAQsPEK (E) IT(0.0)DS(0.0)EAS(0.0)KPKDGQDAIAQS(0.99)PEK K:TMT10,s:Phosphorylated S SLTM 117431.6 25 4 167.1 494.15 HUMAN 1 -6.9253 3.4068 GQDINLNSPNKGLLS-p O43399-2;S12-p GQDINLNSPNKGLLS 0.95572771746963 0.0453960353890061 -0.00866666666666667 -0.295 0.386855645241263 17.9712124901862 -0.00866666666666667 -0.295 0.914775312301872 0.0159543366201892 -0.11211303276934 -3.45361991403302 O43399 TPD52L2 O43399.2.S12.p_TPD52L2 O43399-2_S12s_1_1_12_12 O43399-2 O43399-7|A0A087WYR3|O43399-5|O43399-3|O43399-4|O43399-2|A0A087WZ51 Isoform 2 of Tumor protein D54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14616.14616.2 16.09 16.09 6.552 2 1 1 0 985.9393 1874.9116 M1m S12s Acetyl 1 (-) mDSAGQDINLNsPNK (G) M(1.0)DS(0.0)AGQDINLNS(0.99)PNK K:TMT10,m:Oxidized methionine,s:Phosphorylated S TPD52L2 19957.8 6 10 793.1 224.4 HUMAN 1 -0.3869 -17.9712 GQDIRIPTPVIHTKH-p P12532-2;T441-p GQDIRIPTPVIHTKH 0.947224863277364 0.0484379931481338 -0.0143333333333334 0.255 0.466496738636934 17.583169382054 -0.0143333333333333 0.255 0.898153002642364 0.0174454855651778 -0.134122543694514 3.37570930236617 P12532 CKMT1B P12532.2.T441.p_CKMT1B P12532-2_T441t _1_1_441_441 P12532-2 P12532-2 Isoform 2 of Creatine kinase U-type, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14661.14661.5 14.43 14.43 6.804 2 1 1 0 450.8564 2170.2861 T441t TMT10 434 (R) GQDIRIPtPVIHTKH (-) GQDIRIPT(0.99)PVIHT(0.0)KH K:TMT10,t:Phosphorylated T CKMT1A 50933.3 4 8 1688.1 120.83 HUMAN 1 -0.4665 17.5832 GQDQDKKSPKPKKKK-p O14617-5;S931-p GQDQDKKSPKPKKKK 0.151088296660813 0.0145939287297353 -0.687333333333333 0.641666666666667 16.5452319050697 25.4270784369351 -0.687333333333333 0.641666666666667 0.0221552578825193 0.00286610539292144 -3.17359324226434 5.14619563357269 O14617 AP3D1 O14617.5.S931.p_AP3D1 O14617-5_S931s _1_1_931_931 O14617-5 O14617-5|O14617-2 Isoform 5 of AP-3 complex subunit delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6973.6973.5 20.87 20.87 14.474 2 1 1 0 751.9931 3675.9686 S931s TMT10 913 (K) TEAQGEEDDAEGQDQDKKsPKPK (K) T(0.0)EAQGEEDDAEGQDQDKKS(0.99)PKPK K:TMT10,s:Phosphorylated S AP3D1 137789.5 3 8 513.1 286.98 HUMAN 1 -16.5452 25.4271 GQDTFWVTEPEAGGL-p Q86VW2-3;T403-p GQDTFWVTEPEAGGL 0.766186662098155 0.232358066884507 0.0416666666666667 -0.185666666666667 2.21904496263666 8.3482565858817 0.0416666666666667 -0.185666666666667 0.599922988103336 0.146276426275059 0.556782659984563 -1.6949643312147 Q86VW2 ARHGEF25 Q86VW2.3.T403.p_ARHGEF25 Q86VW2-3_T389tT399tT403t_3_3_389_403 Q86VW2-3 Q86VW2-3|Q86VW2-2 Isoform 3 of Rho guanine nucleotide exchange factor 25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29486.29486.3 7.8 2.37 6.963 5 3 3 0 1115.1992 3103.6625 T389t T399t T403t Hydrogen 388 (K) LtAQGKLLGQDtFWVtEPEAGGLLSSR (G) LT(0.99)AQGKLLGQDT(0.99)FWVT(0.99)EPEAGGLLS(0.0)S(0.0)R K:TMT10-Lys-Only,t:Phosphorylated T ARHGEF25 68683.5 1 2 5110.1 22.88 HUMAN 1 2.219 -8.3483 GQEADELSFRAGEEL-p Q9UKS6;S383-p GQEADELSFRAGEEL 0.51428507339171 0.130025143919627 -0.0933333333333334 -0.186333333333333 5.33295047348115 11.6759444693745 -0.0933333333333334 -0.186333333333333 0.292890275575974 0.0679838183081679 -1.1647380979205 -2.27388583541473 Q9UKS6 PACSIN3 Q9UKS6.S383.p_PACSIN3 Q9UKS6_S383s _1_1_383_383 Q9UKS6 Q9UKS6 Protein kinase C and casein kinase substrate in neurons protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29035.29622.4 20.52 20.52 6.583 3 1 1 0 782.3922 3046.5774 S383s TMT10 370 (R) ALYDYAGQEADELsFRAGEELLK (M) ALY(0.0)DY(0.0)AGQEADELS(0.99)FRAGEELLK K:TMT10,s:Phosphorylated S PACSIN3 48828.3 7 9 547.1 275.62 HUMAN 1 -5.333 -11.6759 GQEDEAESDIFSIRE-p Q07021;S201-p GQEDEAESDIFSIRE 0.554086016426258 0.153360447404638 0.091 0.253 4.73425415435962 10.7083999094291 0.091 0.253 0.336182099097506 0.0849493400036862 1.0551258033806 2.10417861581228 Q07021 C1QBP Q07021.S201.p_C1QBP Q07021_S201s _1_1_201_201 Q07021 Q07021|I3L3B0 Complement component 1 Q subcomponent-binding protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27681.27681.4 26.74 26.74 5.431 3 1 1 0 862.139 3365.5681 S201s TMT10 181 (K) ALVLDCHYPEDEVGQEDEAEsDIFSIR (E) ALVLDCHY(0.0)PEDEVGQEDEAES(0.99)DIFS(0.0)IR C:Carbamidomethylation,s:Phosphorylated S C1QBP 31761 2 2 4057.1 38.47 HUMAN 1 4.7343 10.7084 GQEEAAQSPYRAVVQ-p Q9NRD1;S284-p GQEEAAQSPYRAVVQ 0.860930514583713 0.328751203387295 -0.0523333333333333 0.16 1.2700746545892 6.39705893658595 -0.0523333333333333 0.16 0.746435927174861 0.229241956493781 -0.340316088045449 1.35465886825981 Q9NRD1 FBXO6 Q9NRD1.S284.p_FBXO6 Q9NRD1_S284s _1_1_284_284 Q9NRD1 Q9NRD1 F-box only protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4212.4212.2 14.82 9.89 6.349 2 1 1 0 841.381 1601.7869 S284s TMT10 276 (K) HGQEEAAQsPYR (A) HGQEEAAQS(0.99)PY(0.0)R s:Phosphorylated S FBXO6 34331.3 3 2 4591.1 29.12 HUMAN 1 -1.2701 6.3971 GQEGAGDSPGSQFSK-p Q12778;S287-p GQEGAGDSPGSQFSK 0.182279204215845 0.0379310562543996 0.208333333333333 0.391 14.5437801043371 19.084229492642 0.208333333333333 0.391 0.0351254575034779 0.0123474435899086 2.79331661112416 3.6818682735696 Q12778 FOXO1 Q12778.S287.p_FOXO1 Q12778_S287s _1_1_287_287 Q12778 Q12778 Forkhead box protein O1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13958.13958.3 18.15 18.15 3.774 5 1 1 0 826.0648 2396.2094 S287s TMT10 275 (K) ASLQSGQEGAGDsPGSQFSK (W) AS(0.0)LQS(0.0)GQEGAGDS(0.99)PGS(0.0)QFS(0.0)K K:TMT10,s:Phosphorylated S FOXO1 70059.8 1 8 2524.2 80 HUMAN 1 14.5438 19.0842 GQFDDADSSDSENRD-p Q9BRS2;S21-p GQFDDADSSDSENRD 0.984797218832632 0.101634066156776 0.00366666666666667 -0.227333333333333 0.13501790372748 13.1156586169462 0.00366666666666667 -0.227333333333333 0.969389272998699 0.0488016086943643 0.0401815463401774 -2.5305258275791 Q9BRS2 RIOK1 Q9BRS2.S21.p_RIOK1 Q9BRS2_S21sS22s_2_2_21_22 Q9BRS2 Q9BRS2|E9PFQ8 Serine/threonine-protein kinase RIO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19196.19409.3 10.24 6.57 2.834 3 2 2 0 938.0891 2652.3153 S21s S22s TMT10 11 (R) VVPGQFDDADssDSENRDLK (T) VVPGQFDDADS(0.99)S(0.99)DS(0.0)ENRDLK K:TMT10,s:Phosphorylated S RIOK1 65924.2 2 2 5037.1 23.65 HUMAN 1 0.135 -13.1157 GQFKCLGSPQHLKSK-p Q99758;S1597-p GQFKCLGSPQHLKSK 0.616977811570828 0.107736058899494 -0.0726666666666667 -0.177 3.89314486190168 12.7818892649442 -0.0726666666666667 -0.177 0.408023816548567 0.0527000556121627 -0.896648274811737 -2.47050945138822 Q99758 ABCA3 Q99758.S1597.p_ABCA3 Q99758_S1597s _1_1_1597_1597 Q99758 Q86UQ4-4|A0A0A0MT16|Q86UQ4-3|Q86UQ4-5|Q86UQ4-7|Q86UQ4-6|Q8IZY2|Q8IZY2-2|Q99758|H0Y3H2 ATP-binding cassette sub-family A member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10846.10846.3 11.65 6.84 99 1 1 1 0 526.615 1497.8612 S1597s TMT10 1594 (K) CLGsPQHLK (S) CLGS(1.0)PQHLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ABCA3 192956.2 2 14 1112.1 175.87 HUMAN 1 -3.8931 -12.7819 GQGAGEGSTREWASR-p Q9C0C2;S786-p GQGAGEGSTREWASR 0.289757506488831 0.0262229772894803 0.157333333333333 -0.357333333333333 10.1420195668682 21.4974208945123 0.157333333333333 -0.357333333333333 0.0967827689990782 0.00708366330625563 2.00639527188437 -4.20362392012152 Q9C0C2 TNKS1BP1 Q9C0C2.S786.p_TNKS1BP1 Q9C0C2_S786s _1_1_786_786 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7984.7984.3 10.62 10.62 1.367 4 1 1 0 674.3069 1940.9412 S786s TMT10 778 (K) YGQGAGEGsTREWASR (C) Y(0.0)GQGAGEGS(0.99)T(0.0)REWAS(0.0)R s:Phosphorylated S TNKS1BP1 182819.3 1 28 4.1 2105.7 HUMAN 1 10.142 -21.4974 GQGDAPPTPLPTPVD-p O15067;T619-p GQGDAPPTPLPTPVD 0.188778224113783 0.00404124447761282 0.211666666666667 0.625333333333333 14.1949576761709 35.2570705808967 0.211666666666667 0.625333333333334 0.0380631066993427 0.000298052618701802 2.72878376929026 8.18933331907061 O15067 PFAS O15067.T619.p_PFAS O15067_T619t _1_1_619_619 O15067 O15067 Phosphoribosylformylglycinamidine synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.37053.37053.3 20.79 20.87 3.391 2 1 1 0 1061.224 3101.6923 T619t TMT10 611 (R) NGQGDAPPtPLPTPVDLELEWVLGK (M) NGQGDAPPT(0.99)PLPT(0.0)PVDLELEWVLGK K:TMT10,t:Phosphorylated T PFAS 146386.3 5 2 3705.1 44.9 HUMAN 1 14.195 35.2571 GQGFPDISPPTYVKE-p Q6YP21;S76-p GQGFPDISPPTYVKE 0.924305950904693 0.14241112415369 0.0143333333333333 0.206666666666667 0.673425655176444 11.1549250519109 0.0143333333333333 0.206666666666667 0.85636209210606 0.0766491767730524 0.189827454629461 2.18227350505521 Q6YP21 CCBL2 Q6YP21.S76.p_CCBL2 Q6YP21_S76s _1_1_76_76 Q6YP21 Q6YP21|Q6YP21-3|Q6YP21-2 Kynurenine--oxoglutarate transaminase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.33628.33628.4 23.58 23.58 6.624 4 1 1 0 756.652 2943.6232 S76s TMT10 59 (K) LAADPSVVNLGQGFPDIsPPTYVK (E) LAADPS(0.0)VVNLGQGFPDIS(0.99)PPT(0.0)Y(0.0)VK K:TMT10,s:Phosphorylated S KYAT3 51855.8 2 1 3193.1 58.04 HUMAN 1 0.6734 11.1549 GQGHAQASPEIRFTP-p Q9NZC9;S151-p GQGHAQASPEIRFTP 0.486093065914574 0.0363875753989236 -0.0923333333333333 0.268 5.77186415494107 19.3651871947859 -0.0923333333333334 0.268 0.264736354687962 0.0115739414363466 -1.24381442527052 3.74065837837312 Q9NZC9 SMARCAL1 Q9NZC9.S151.p_SMARCAL1 Q9NZC9_S151s _1_1_151_151 Q9NZC9 Q9NZC9 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19217.19217.3 23.27 23.27 13.905 3 1 1 0 845.4257 2454.2939 S151s TMT10 136 (K) QQLLSYELGQGHAQAsPEIR (F) QQLLS(0.0)Y(0.0)ELGQGHAQAS(0.99)PEIR s:Phosphorylated S SMARCAL1 106506.6 1 4 1258.1 161.3 HUMAN 1 -5.7719 19.3652 GQGKEYPSPPPSPLR-p Q9HCD6-2;S1540-p GQGKEYPSPPPSPLR 0.69729683833917 0.734458982025517 -0.0823333333333333 -0.035 2.94086073195275 1.84841710241277 -0.0823333333333334 -0.035 0.508058739984973 0.65336864620989 -0.708374636184423 -0.474911307320464 Q9HCD6 TANC2 Q9HCD6.2.S1540.p_TANC2 Q9HCD6-2_S1540s _1_1_1540_1540 Q9HCD6-2 Q9HCD6-2 Isoform 2 of Protein TANC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12180.12180.3 13.64 13.64 11.854 3 1 1 0 568.9579 1624.9009 S1540s TMT10 1537 (K) EYPsPPPSPLRR (G) EY(0.0)PS(0.99)PPPS(0.0)PLRR s:Phosphorylated S TANC2 222282.4 4 9 348.1 351.89 HUMAN 1 -2.9409 -1.8484 GQGLHDGSFGPASGT-p Q8TCU6;S1049-p GQGLHDGSFGPASGT 0.28718584787302 0.952285258377512 0.195333333333333 0.00666666666666669 10.2165925674726 0.302513466261851 0.195333333333333 0.00666666666666669 0.095135092165326 0.932714338940903 2.0193663835898 0.0884233773345953 Q8TCU6 PREX1 Q8TCU6.S1049.p_PREX1 Q8TCU6_S1049s _1_1_1049_1049 Q8TCU6 Q8TCU6|Q8TCU6-3|Q8TCU6-2 Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17915.17915.3 24.23 20.84 2.722 3 1 1 0 1145.1843 3353.5654 S1049s TMT10 1032 (K) CLPAAEGDPQGQGLHDGsFGPASGTLGQEDR (G) CLPAAEGDPQGQGLHDGS(0.99)FGPAS(0.0)GT(0.0)LGQEDR C:Carbamidomethylation,s:Phosphorylated S PREX1 188881.6 2 8 379.1 336 HUMAN 1 10.2166 0.3025 GQGQQAQTPTGKQTD-p P48729-2;T349-p GQGQQAQTPTGKQTD 0.427336654612567 0.0289654232096903 -0.112 -0.418333333333333 6.80092800739576 20.8247193271596 -0.112 -0.418333333333334 0.208884973440988 0.00827042956402214 -1.42611971695502 -4.0542272439406 P48729 CSNK1A1 P48729.2.T349.p_CSNK1A1 P48729-2_T349t _1_1_349_349 P48729-2 P48729-2|U3KPX3 Isoform 2 of Casein kinase I isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6117.6117.4 23.93 23.93 3.082 6 1 1 0 811.1653 3161.6754 T349t TMT10 333 (K) AAQQAASSSGQGQQAQtPTGKQTDK (T) AAQQAAS(0.0)S(0.0)S(0.0)GQGQQAQT(0.99)PT(0.0)GKQT(0.0)DK K:TMT10,t:Phosphorylated T CSNK1A1 42221.8 3 6 1498.2 136.39 HUMAN 1 -6.8009 -20.8247 GQGSLTDSGPERRPE-p P40222;S499-p GQGSLTDSGPERRPE 0.0495990523839634 0.310060256385774 0.455 -0.131666666666667 28.8570586197775 6.71992860580266 0.455 -0.131666666666667 0.00130105045232229 0.212817403100652 6.0917788769847 -1.41151906793991 P40222 TXLNA P40222.S499.p_TXLNA P40222_S499s _1_1_499_499 P40222 P40222 Alpha-taxilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8797.8797.4 15.12 8.01 12.193 6 1 1 0 932.4601 3646.8483 S499s TMT10 484 (K) RVQDLSAGGQGSLTDsGPERRPEGPGAQAPSSPR (V) RVQDLS(0.0)AGGQGS(0.0)LT(0.0)DS(0.99)GPERRPEGPGAQAPS(0.0)S(0.0)PR s:Phosphorylated S TXLNA 62232.4 2 2 1073.1 180.65 HUMAN 1 28.8571 -6.7199 GQGTLQHSPVGPAGP-p E7EWR4;S302-p GQGTLQHSPVGPAGP 0.294750508924689 0.0191485533380821 0.162333333333333 0.359 10.0087103569537 23.6185261771884 0.162333333333333 0.359 0.0997996376131905 0.00434657704690177 1.98322378364252 4.69674333718499 E7EWR4 CSTF2 E7EWR4.S302.p_CSTF2 E7EWR4_S302s _1_1_302_302 E7EWR4 E7EWR4 Cleavage stimulation factor subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10484.10484.3 16.72 16.72 4.949 3 1 1 0 756.7157 2188.1672 S302s TMT10 295 (R) GQGTLQHsPVGPAGPASIER (V) GQGT(0.0)LQHS(0.99)PVGPAGPAS(0.0)IER s:Phosphorylated S CSTF2 63055.8 3 3 2335.1 87.35 HUMAN 1 10.0087 23.6185 GQHETGGSPSKQQMR-p Q96PY6-3;S692-p GQHETGGSPSKQQMR 0.93527869194269 0.00172005316210418 0.0126666666666667 -0.919 0.568705520368578 43.812951932866 0.0126666666666667 -0.919 0.877262263311196 4.15628008919771e-05 0.161894658338578 -11.9868757772084 Q96PY6 NEK1 Q96PY6.3.S692.p_NEK1 Q96PY6-3_S692s _1_1_692_692 Q96PY6-3 Q96PY6-3|Q96PY6-6 Isoform 3 of Serine/threonine-protein kinase Nek1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10075.10075.3 19.03 19.03 1.228 6 1 1 0 802.3962 2325.2087 S692s TMT10 677 (K) SSDVSPPLGQHETGGsPSK (Q) S(0.0)S(0.0)DVS(0.0)PPLGQHET(0.0)GGS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S NEK1 146666.9 1 1 1537.1 133.31 HUMAN 1 0.5687 -43.813 GQHVVAGTPGRVFDM-p P38919;T163-p GQHVVAGTPGRVFDM 0.873216810979358 0.813853616701827 -0.0273333333333333 0.0246666666666667 1.1520891061558 1.25288947847476 -0.0273333333333333 0.0246666666666667 0.766992450802346 0.749395450400447 -0.311605007046263 0.336128729530753 P38919 EIF4A3 P38919.T163.p_EIF4A3 P38919_T163t _1_1_163_163 P38919 P38919 Eukaryotic initiation factor 4A-III HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23908.23908.3 17.31 17.31 11.683 2 1 1 0 847.4243 2460.3019 T163t TMT10 153 (K) LDYGQHVVAGtPGRVFDMIR (R) LDY(0.0)GQHVVAGT(0.99)PGRVFDMIR t:Phosphorylated T EIF4A3 47155.5 10 3 2130.1 96.55 HUMAN 1 -1.1521 1.2529 GQKALITTPLHKETT-p P10243;T522-p GQKALITTPLHKETT 0.194950907975575 0.0117972527275502 0.218333333333333 -0.803333333333333 13.8472536758062 26.951129923164 0.218333333333333 -0.803333333333333 0.0412358197358249 0.00201784130468315 2.66491662574559 -5.54788570336704 P10243 MYBL1 P10243.T522.p_MYBL1 P10243_T522t _1_1_522_522 P10243 P10243 Myb-related protein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14161.14161.5 13.85 13.85 1.149 4 1 1 0 584.3453 2837.727 T522t TMT10 518 (K) ALITtPLHKETTPKDQK (E) ALIT(0.0)T(0.99)PLHKET(0.0)T(0.0)PKDQK K:TMT10,t:Phosphorylated T MYBL1 86513 1 8 1622.1 126.88 HUMAN 1 13.8473 -26.9511 GQKASPPTLAPATAS-p Q9NP71;T509-p GQKASPPTLAPATAS 0.782729634837062 0.830904043798338 0.0613333333333333 -0.0266666666666667 2.04465415384006 1.12549011413033 0.0613333333333333 -0.0266666666666667 0.62450307999192 0.771704421550939 0.518668468977798 -0.305036126384364 Q9NP71 MLXIPL Q9NP71.T509.p_MLXIPL Q9NP71_T509t_1_1_509_509 Q9NP71 Q9NP71|Q9NP71-3|Q9NP71-2|Q9NP71-4|Q9NP71-6|A0A0C4DG26|Q9NP71-5 Carbohydrate-responsive element-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32965.32965.5 12.06 12.06 12.056 12 1 1 0 1187.4456 5851.2246 T509t N524n N525n TMT10 502 (R) GQKASPPtLAPATASPPTTAGSnnPCLTQLLTAAKPEQALEPPLVSSTLLR (S) GQKAS(0.0)PPT(0.99)LAPAT(0.0)AS(0.0)PPT(0.0)T(0.0)AGS(0.0)N(1.0)N(1.0)PCLT(0.0)QLLT(0.0)AAKPEQALEPPLVS(0.0)S(0.0)T(0.0)LLR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,n:Deamidated MLXIPL 93755.5 3 9 1023.1 187.4 HUMAN 1 2.0447 -1.1255 GQKGKKQSFDDNDSE-p O60841;S107-p GQKGKKQSFDDNDSE 0.728472563795125 0.148298128846236 -0.0693333333333333 0.153 2.61206146062211 10.913352999801 -0.0693333333333334 0.153 0.54801677668104 0.0810335191539836 -0.640452734222262 2.13998028603202 O60841 EIF5B O60841.S107.p_EIF5B O60841_S107s _1_1_107_107 O60841 O60841|A0A087WUT6 Eukaryotic translation initiation factor 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11223.11223.4 15.94 15.94 3.601 3 1 1 0 885.7068 3459.8464 S107s TMT10 103 (K) GKKQsFDDNDSEELEDKDSK (S) GKKQS(0.99)FDDNDS(0.0)EELEDKDS(0.0)K K:TMT10,s:Phosphorylated S EIF5B 139280.8 7 3 113.1 571.22 HUMAN 1 -2.6121 10.9134 GQKVGSLTPPSSPKT-p Q2M2I8;T620-p GQKVGSLTPPSSPKT 0.462257882121586 0.593247349354612 0.1 0.0623333333333334 6.18127855582622 3.06839202585085 0.1 0.0623333333333334 0.240919606090748 0.49335643523048 1.31679328268609 0.734165183515914 Q2M2I8 AAK1 Q2M2I8.T620.p_AAK1 Q2M2I8_T620t _1_1_620_620 Q2M2I8 Q2M2I8|Q2M2I8-2|E9PG46 AP2-associated protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15532.15532.2 15.58 10.37 2.79 4 1 1 0 804.4453 1527.9147 T620t TMT10 616 (K) VGSLtPPSSPK (T) VGS(0.0)LT(0.99)PPS(0.0)S(0.0)PK K:TMT10,t:Phosphorylated T AAK1 104624.8 4 3 818.1 219.02 HUMAN 1 6.1813 3.0684 GQLEDEGSQEKQGRS-p Q969E4;S65-p GQLEDEGSQEKQGRS 0.981575064370413 0.0042090276301717 -0.00633333333333335 0.865333333333333 0.160660424287424 34.9552908673877 -0.00633333333333336 0.865333333333334 0.96368246691496 0.00031950003734792 -0.0476788535286603 8.07776885822012 Q969E4 TCEAL3 Q969E4.S65.p_TCEAL3 Q969E4_S65s _1_1_65_65 Q969E4 Q969E4 Transcription elongation factor A protein-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8768.8768.4 25.06 21.33 22.639 2 1 1 0 951.9333 3724.7335 S65s TMT10 42 (K) TECEGKREDEGEPGDEGQLEDEGsQEK (Q) T(0.0)ECEGKREDEGEPGDEGQLEDEGS(0.99)QEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TCEAL3 22616 8 1 943.1 197.95 HUMAN 1 -0.1607 34.9553 GQLERSPSGSAFGSQ-p Q96N67-6;S1423-p GQLERSPSGSAFGSQ 0.322888693659998 0.173873394108617 -0.231 0.192 9.19235229526707 9.99084150266606 -0.231 0.192 0.120438342625176 0.100211104707239 -1.84166521084825 1.97931975773033 Q96N67 DOCK7 Q96N67.6.S1423.p_DOCK7 Q96N67-6_S1423s _1_1_1423_1423 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3|Q96N67-4 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11506.11506.2 12.36 7.09 1.153 4 1 1 0 873.4052 1665.8394 S1423s TMT10 1421 (R) SPsGSAFGSQENLR (W) S(0.0)PS(0.99)GS(0.0)AFGS(0.0)QENLR s:Phosphorylated S DOCK7 243551.1 4 20 345.1 352.4 HUMAN 1 -9.1924 9.9908 GQLKDPGTPDQFLRD-p O00204;T171-p GQLKDPGTPDQFLRD 0.171753109345633 0.0173755657829573 -0.441 0.469 15.2346155735539 24.2613174956923 -0.441 0.469 0.0299597677694682 0.00374859265965503 -2.92257044389298 4.85326583030354 O00204 SULT2B1 O00204.T171.p_SULT2B1 O00204_T171t _1_1_171_171 O00204 O00204|O00204-2 Sulfotransferase family cytosolic 2B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31810.31810.4 9.49 9.49 99 1 1 1 0 757.4221 2946.702 T171t TMT10 162 (K) IAGQLKDPGtPDQFLRDFLK (G) IAGQLKDPGT(1.0)PDQFLRDFLK K:TMT10,t:Phosphorylated T SULT2B1 41535.2 1 2 3557.1 48.28 HUMAN 1 -15.2346 24.2613 GQLKKAASWLFKNAE-p Q5THJ4;S2671-p GQLKKAASWLFKNAE 0.182722695333724 0.0775282848153013 -0.207333333333333 -0.211333333333333 14.5203928557214 14.7336650599189 -0.207333333333333 -0.211333333333333 0.0353151222862076 0.0336227703277662 -2.78897505200439 -2.82684289442224 Q5THJ4 VPS13D Q5THJ4.S2671.p_VPS13D Q5THJ4_S2671s _1_1_2671_2671 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23275.23275.3 12.54 12.54 99 1 1 1 0 573.3384 1638.0346 S2671s TMT10 2668 (K) KAAsWLFK (N) KAAS(1.0)WLFK K:TMT10,s:Phosphorylated S VPS13D 495672.3 2 19 124.1 545.31 HUMAN 1 -14.5204 -14.7337 GQLNKSDSNQYIGEL-p O60447-2;S700-p GQLNKSDSNQYIGEL 0.875132061081579 0.0201366641412936 -0.025 0.353333333333333 1.1348809263508 23.2308852358549 -0.025 0.353333333333333 0.770037556742305 0.00475238346769638 -0.307377883545326 4.6039980957977 O60447 EVI5 O60447.2.S700.p_EVI5 O60447-2_S700s _1_1_700_700 O60447-2 O60447-2 Isoform 2 of Ecotropic viral integration site 5 protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29254.29254.5 11.06 11.06 2.309 3 1 1 0 825.0401 4041.1972 S700s TMT10 691 (K) LQGQLNKSDsNQYIGELKDQIAELNHELR (C) LQGQLNKS(0.0)DS(0.99)NQY(0.0)IGELKDQIAELNHELR K:TMT10,s:Phosphorylated S EVI5 94702 4 2 2708.1 73.26 HUMAN 1 -1.1349 23.2309 GQLNRAGSISTLDSL-p Q9P260-2;S180-p GQLNRAGSISTLDSL 0.549950036106406 0.817320530043157 0.0906666666666667 -0.0266666666666667 4.7900883345617 1.22577596325172 0.0906666666666667 -0.0266666666666667 0.331887706959521 0.754088649176278 1.06544646101423 -0.329557436903215 Q9P260 KIAA1468 Q9P260.2.S180.p_KIAA1468 Q9P260-2_S180s _1_1_180_180 Q9P260-2 Q9P260-2|A0A075B785 Isoform 2 of LisH domain and HEAT repeat-containing protein KIAA1468 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25215.25215.2 7.2 7.2 1.145 4 1 1 0 881.4371 1681.8958 S180s TMT10 178 (R) AGsISTLDSLDFAR (Y) AGS(0.99)IS(0.0)T(0.0)LDS(0.0)LDFAR s:Phosphorylated S KIAA1468 139711.8 1 5 724.1 236.86 HUMAN 1 4.7901 -1.2258 GQLQKLASERNLFIS-p P42166;S272-p GQLQKLASERNLFIS 0.387151970762572 0.147598229972278 0.169333333333333 -0.325 7.62308719015626 10.9385314004707 0.169333333333333 -0.325 0.172858715308023 0.0805650832043115 1.56969944685984 -2.14438345030793 P42166 TMPO P42166.S272.p_TMPO P42166_S272s _1_1_272_272 P42166 P42166 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19987.19987.3 8.91 8.91 8.909 2 1 1 0 659.3543 1896.0777 S272s TMT10 270 (K) LAsERNLFISCK (S) LAS(0.99)ERNLFIS(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TMPO 76061.2 1 13 123.1 546.19 HUMAN 1 7.6231 -10.9385 GQLQREASPGPVGSP-p Q9GZY6;S217-p GQLQREASPGPVGSP 0.727607160093088 0.45219005708511 0.0946666666666666 0.238 2.62006906633961 4.59347706978608 0.0946666666666667 0.238 0.5470072637068 0.347258026692394 0.642128079829286 1.02881050599086 Q9GZY6 LAT2 Q9GZY6.S217.p_LAT2 Q9GZY6_S217s_1_1_217_217 Q9GZY6 Q9GZY6 Linker for activation of T-cells family member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19972.19972.3 8.62 8.62 2.617 4 1 1 0 1066.7889 3117.3858 S217s N235n TMT10 215 (R) EAsPGPVGSPDEEDGEPDYVnGEVAATEA (-) EAS(0.99)PGPVGS(0.0)PDEEDGEPDY(0.0)VN(1.0)GEVAAT(0.0)EA s:Phosphorylated S,n:Deamidated LAT2 26835 1 3 3908.1 40.93 HUMAN 1 2.6201 4.5935 GQLVGLNSPNSILKA-p P33981;S821-p GQLVGLNSPNSILKA 0.950174393059231 0.0070991644157756 0.0106666666666667 -0.660333333333333 0.439197636770094 30.782026544287 0.0106666666666667 -0.660333333333334 0.903816439254237 0.000835213192533922 0.126615626453088 -6.66270590626237 P33981 TTK P33981.S821.p_TTK P33981_S821s _1_1_821_821 P33981 P33981|P33981-2 Dual specificity protein kinase TTK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34521.34521.3 21.8 21.8 4.874 3 1 1 0 785.1143 2273.3633 S821s TMT10 811 (K) YVLGQLVGLNsPNSILK (A) Y(0.0)VLGQLVGLNS(0.99)PNS(0.0)ILK K:TMT10,s:Phosphorylated S TTK 98040.5 5 10 1204.1 166.9 HUMAN 1 0.4392 -30.782 GQLVRNDSLPVLRGG-p Q9GZY8-5;S146-p GQLVRNDSLPVLRGG 0.53706412572523 0.37236988138142 0.0863333333333333 -0.0983333333333333 4.99214881821524 5.69088658831867 0.0863333333333334 -0.0983333333333333 0.316799960070163 0.269718875997519 1.10261913199012 -1.22901721485485 Q9GZY8 MFF Q9GZY8.5.S146.p_MFF Q9GZY8-5_S146s _1_1_146_146 Q9GZY8-5 Q9GZY8-5 Isoform 5 of Mitochondrial fission factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15966.15966.3 13.46 9.3 99 1 1 1 0 673.3626 1938.1082 S146s TMT10 137 (R) QNGQLVRNDsLPVLR (G) QNGQLVRNDS(1.0)LPVLR s:Phosphorylated S MFF 27104.4 5 10 1266.3 160.29 HUMAN 1 4.9921 -5.6909 GQLVRNDSLVTPSPQ-p Q9GZY8-2;S146-p GQLVRNDSLVTPSPQ 0.513855823582322 0.263969437427972 0.0976666666666667 0.108 5.34116582814527 7.62039385591263 0.0976666666666667 0.108 0.292336751831621 0.17296594915741 1.16622727835133 1.56875843812299 Q9GZY8 MFF Q9GZY8.2.S146.p_MFF Q9GZY8-2_S146s _1_1_146_146 Q9GZY8-2 Q9GZY8-2|A0A0A0MS29 Isoform 2 of Mitochondrial fission factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11044.11044.3 17.03 13.28 2.95 3 1 1 0 839.7654 2437.3109 S146s TMT10 137 (R) QNGQLVRNDsLVTPSPQQAR (V) QNGQLVRNDS(0.99)LVT(0.0)PS(0.0)PQQAR s:Phosphorylated S MFF 33030 1 1 1266.2 160.29 HUMAN 1 5.3412 7.6204 GQLVRNDSLYGISNI-p Q9GZY8-4;S146-p GQLVRNDSLYGISNI 0.907131913243435 0.646773389524048 0.0173333333333333 0.0456666666666667 0.830676449092239 2.58039069093934 0.0173333333333333 0.0456666666666667 0.825909297445966 0.552027776676046 0.230848927356731 0.633733616124582 Q9GZY8 MFF Q9GZY8.4.S146.p_MFF Q9GZY8-4_S146s _1_1_146_146 Q9GZY8-4 Q9GZY8-4|E9PPW6 Isoform 4 of Mitochondrial fission factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27797.27797.5 24.34 22.84 3.254 9 1 1 0 884.047 4336.2218 S146s TMT10 137 (R) QNGQLVRNDsLYGISNIDTTIEGTSDDLTVVDAASLRR (Q) QNGQLVRNDS(0.99)LY(0.0)GIS(0.0)NIDT(0.0)T(0.0)IEGT(0.0)S(0.0)DDLT(0.0)VVDAAS(0.0)LRR s:Phosphorylated S MFF 25066.2 10 9 1266.1 160.29 HUMAN 1 0.8307 2.5804 GQMPENPYSEVGKIA-p Q9UPX8-3;Y989-p GQMPENPYSEVGKIA 0.605650171576433 0.710997505066784 -0.224666666666667 0.0976666666666667 4.02524926582704 2.03701010855874 -0.224666666666667 0.0976666666666667 0.39579934705158 0.625603239819677 -0.921952955931354 0.516922255268945 Q9UPX8 SHANK2 Q9UPX8.3.Y989.p_SHANK2 Q9UPX8-3_Y989y _1_1_989_989 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6|Q9UPX8-4|E7EUA2 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11048.11094.3 24.95 18.1 3.917 2 1 1 0 710.6876 2050.0792 Y989y TMT10 981 (K) RGQMPENPySEVGK (I) RGQMPENPY(0.99)S(0.0)EVGK K:TMT10,y:Phosphorylated Y SHANK2 202341.2 4 2 40.1 49 HUMAN 1 -4.0252 2.037 GQNGDDSSAGGDFPP-p O94992;S98-p GQNGDDSSAGGDFPP 0.761087920993582 0.134052303126823 -0.0523333333333333 0.264333333333333 2.27559930445437 11.5027366865183 -0.0523333333333334 0.264333333333333 0.59216136595947 0.0707499816161458 -0.569005984646602 2.24336625043307 O94992 HEXIM1 O94992.S98.p_HEXIM1 O94992_S97sS98s_2_2_97_98 O94992 O94992 Protein HEXIM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25082.25082.4 10.68 10.68 6.232 5 2 2 0 1157.257 4465.0778 N93n S97s S98s TMT10 91 (K) GQnGDDssAGGDFPPPAEVEPTPEAELLAQPCHDSEASK (L) GQN(1.0)GDDS(0.99)S(0.99)AGGDFPPPAEVEPT(0.0)PEAELLAQPCHDS(0.0)EAS(0.0)K C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S HEXIM1 40908 2 5 1285.2 158.28 HUMAN 1 -2.2756 11.5027 GQNLHGQSPHGQGRP-p O43439-4;S561-p GQNLHGQSPHGQGRP 0.76024674529999 0.124121732832605 -0.043 -0.175 2.28295760172609 11.955727076869 -0.043 -0.175 0.591158910178966 0.0637422357632171 -0.570591607722365 -2.32333005346071 O43439 CBFA2T2 O43439.4.S561.p_CBFA2T2 O43439-4_S561s _1_1_561_561 O43439-4 O43439-4|O43439-5|O43439-2|Q68DC6 Isoform 4 of Protein CBFA2T2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11643.11643.5 14.56 14.56 99 1 1 1 0 558.2898 2707.4524 S561s TMT10 552 (R) LCGQNLHGQsPHGQGRPLLPVGR (G) LCGQNLHGQS(1.0)PHGQGRPLLPVGR C:Carbamidomethylation,s:Phosphorylated S CBFA2T2 68762.1 2 5 2492.1 81.27 HUMAN 1 -2.283 -11.9557 GQPEARATPGSTKKR-p O15446-2;T458-p GQPEARATPGSTKKR 0.915262614364166 0.00387967412305424 0.03 -0.583666666666667 0.753111910112009 35.6482536668158 0.03 -0.583666666666667 0.840792461136284 0.000272379634840921 0.210748542995314 -8.33594651379054 O15446 CD3EAP O15446.2.T458.p_CD3EAP O15446-2_T458t _1_1_458_458 O15446-2 O15446-2 Isoform 2 of DNA-directed RNA polymerase I subunit RPA34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3669.3669.3 8.45 8.45 6.581 3 1 1 0 443.2515 1247.7724 T458t Hydrogen 457 (R) AtPGSTKK (R) AT(0.99)PGS(0.0)T(0.0)KK K:TMT10-Lys-Only,t:Phosphorylated T CD3EAP 55456.1 1 7 1198.1 167.21 HUMAN 1 0.7531 -35.6483 GQPLFLDSISPKKSF-p Q2TB10;S334-p GQPLFLDSISPKKSF 0.552918441896641 0.00123467326444358 -0.114 -1.35966666666667 4.7498318381313 47.6873929699813 -0.114 -1.35966666666667 0.334978409505621 1.70318060531266e-05 -1.05800746314881 -14.1949882290083 Q2TB10 ZNF800 Q2TB10.S334.p_ZNF800 Q2TB10_S334s _1_1_334_334 Q2TB10 Q2TB10 Zinc finger protein 800 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25645.25645.5 22.81 22.81 1.126 5 1 1 0 713.8074 3485.0437 S334s TMT10 316 (R) DSITPDIATKPGQPLFLDsISPKK (S) DS(0.0)IT(0.0)PDIAT(0.0)KPGQPLFLDS(0.99)IS(0.0)PKK K:TMT10,s:Phosphorylated S ZNF800 76489.6 2 1 2692.1 73.82 HUMAN 1 -4.7498 -47.6874 GQPPQDHSPGPRTAP-p Q8N8Q3-3;S244-p GQPPQDHSPGPRTAP 0.471941186312508 0.110843098631856 0.177 -0.562 6.01599775861631 12.6106439625086 0.177 -0.562 0.250265061734289 0.0548195673619781 1.28741296893539 -2.43984702987134 Q8N8Q3 ENDOV Q8N8Q3.3.S244.p_ENDOV Q8N8Q3-3_S244s _1_1_244_244 Q8N8Q3-3 Q8N8Q3-3|I3L0L4 Isoform 3 of Endonuclease V HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3966.3966.3 20.13 20.13 9.006 4 1 1 0 796.3426 2307.0435 S244s TMT10 228 (K) GDSGESSGEGQPPQDHsPGPR (T) GDS(0.0)GES(0.0)S(0.0)GEGQPPQDHS(0.99)PGPR s:Phosphorylated S ENDOV 29015.5 3 4 2332.1 87.5 HUMAN 1 6.016 -12.6106 GQPRTPHSPPLAKEH-p Q8IZW8;S350-p GQPRTPHSPPLAKEH 0.703883202680559 0.216309379100503 -0.079 -0.121666666666667 2.86667651212572 8.74834778168236 -0.079 -0.121666666666667 0.516811714018744 0.133402885000651 -0.693200214572114 -1.76418628859745 Q8IZW8 TNS4 Q8IZW8.S350.p_TNS4 Q8IZW8_S350s _1_1_350_350 Q8IZW8 Q8IZW8 Tensin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8765.8967.3 15.34 9.65 3.498 2 1 1 0 495.9457 1405.8568 S350s TMT10 347 (R) TPHsPPLAK (E) T(0.0)PHS(0.99)PPLAK K:TMT10,s:Phosphorylated S TNS4 77846.5 4 2 3466.1 50.3 HUMAN 1 -2.8667 -8.7483 GQQEKEASASPDPAK-p Q9NUA8;S726-p GQQEKEASASPDPAK 0.283283360364086 0.00683011918389872 -0.243666666666667 0.579666666666667 10.3454254549588 31.0707926833336 -0.243666666666667 0.579666666666667 0.0923543709375046 0.000781485153272419 -2.0417917954253 6.75343616364525 Q9NUA8 ZBTB40 Q9NUA8.S726.p_ZBTB40 Q9NUA8_S726sS728s_2_2_726_728 Q9NUA8 Q9NUA8|F8WAI8 Zinc finger and BTB domain-containing protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9030.9030.3 8.45 4.98 99 2 2 2 0 649.9985 1788.047 S726s S728s TMT10 724 (K) EAsAsPDPAKK (S) EAS(1.0)AS(1.0)PDPAKK K:TMT10,s:Phosphorylated S ZBTB40 140797.4 1 7 1500.1 135.98 HUMAN 1 -10.3454 31.0708 GQQETDSSEDEDIIG-p Q8IXQ4;S141-p GQQETDSSEDEDIIG 0.763958217078772 0.0092292356544658 -0.047 0.569166666666667 2.24209763286916 28.7511534856811 -0.047 0.569166666666667 0.596746989472483 0.0013331672960444 -0.561772988134526 6.05190536809727 Q8IXQ4 GPALPP1 Q8IXQ4.S141.p_GPALPP1 Q8IXQ4_S140sS141s_2_2_140_141 Q8IXQ4 Q8IXQ4|A0A0A0MRI1 GPALPP motifs-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19623.19623.3 12.71 13.97 2.31 3 2 2 0 1102.483 3145.4996 S140s S141s TMT10 129 (K) GRDDPGQQETDssEDEDIIGPMPAK (G) GRDDPGQQET(0.0)DS(0.99)S(0.99)EDEDIIGPMPAK K:TMT10,s:Phosphorylated S GPALPP1 38141.2 3 2 2555.1 78.73 HUMAN 2 -2.2421 28.7512 GQQQYDIYERMVPPR-p A0A0D9SF60;Y372-p GQQQYDIYERMVPPR 0.27343988207654 0.0468488959646387 0.398 -0.577 10.6644152917125 17.7817182311 0.398 -0.577 0.0858140641902989 0.0166658771778156 2.097416359868 -3.41546973987893 A0A0D9SF60 NotFound A0A0D9SF60.Y372.p_NotFound A0A0D9SF60_Y372y _1_1_372_372 A0A0D9SF60 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.19478.19523.3 26.23 21.47 3.772 3 1 1 0 866.0493 2516.1714 Y372y TMT10 357 (R) TVHDMEQFGQQQYDIyER (M) T(0.0)VHDMEQFGQQQY(0.0)DIY(0.99)ER y:Phosphorylated Y PKP4 134765 2 1 23.1 71.28 HUMAN 1 10.6644 -17.7817 GQQVGMHSKGTQTAK-p Q8TD19;S944-p GQQVGMHSKGTQTAK 0.0635370415880919 0.123005487848705 -1.05866666666667 -0.347333333333333 25.8677847331027 12.0051014334754 -1.05866666666667 -0.347333333333333 0.00258953345805343 0.0630216626529325 -5.26697111829453 -2.33207527507828 Q8TD19 NEK9 Q8TD19.S944.p_NEK9 Q8TD19_S944s _1_1_944_944 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8636.8636.3 17.22 13.56 99 1 1 1 0 722.7288 2086.2046 S944s TMT10 933 (K) KLEGGQQVGMHsK (G) KLEGGQQVGMHS(1.0)K K:TMT10,s:Phosphorylated S NEK9 108935.2 2 16 224.1 425.83 HUMAN 1 -25.8678 -12.0051 GQRDRSSSAPNVHIN-p P15056;S365-p GQRDRSSSAPNVHIN 0.730031357534783 0.44991536670576 -0.0663333333333333 -0.0983333333333333 2.59188116566391 4.62362402183235 -0.0663333333333333 -0.0983333333333333 0.55056916329188 0.344855850180477 -0.636225699319937 -1.03441452233473 P15056 BRAF P15056.S365.p_BRAF P15056_S365s _1_1_365_365 P15056 P15056 Serine/threonine-protein kinase B-raf HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27355.27355.2 15.53 15.53 1.221 4 1 1 0 1357.1954 2633.4096 S365s TMT10 363 (R) SSsAPNVHINTIEPVNIDDLIR (D) S(0.0)S(0.0)S(0.99)APNVHINT(0.0)IEPVNIDDLIR s:Phosphorylated S BRAF 85177.1 1 20 441.1 311.96 HUMAN 1 -2.5919 -4.6236 GQRKGAGSVFRAHVK-p P62917;S14-p GQRKGAGSVFRAHVK 0.906426058670281 0.0153321672161341 0.0406666666666666 0.430333333333333 0.837415586402962 25.0983836890548 0.0406666666666666 0.430333333333333 0.824628691730587 0.00309144575979732 0.232583433186455 5.06238664260903 P62917 RPL8 P62917.S14.p_RPL8 P62917_S14s _1_1_14_14 P62917 P62917|G3V1A1|E9PP36 60S ribosomal protein L8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9746.9746.2 8.42 2.19 99 1 1 1 0 501.7522 922.5308 S14s TMT10 11 (K) GAGsVFR (A) GAGS(1.0)VFR s:Phosphorylated S RPL8 28252.4 1 1 5531.1 18.46 HUMAN 1 0.8374 25.0984 GQRPRPMSSEELPLA-p Q9H6S0;S1183-p GQRPRPMSSEELPLA 0.379392937735762 0.0745670401724064 -0.138666666666667 -0.211 7.77461366864 14.967029326561 -0.138666666666667 -0.211 0.166931629644555 0.0318637633064326 -1.59603612668334 -2.87040177119065 Q9H6S0 YTHDC2 Q9H6S0.S1183.p_YTHDC2 Q9H6S0_S1183s _1_1_1183_1183 Q9H6S0 Q9H6S0 Probable ATP-dependent RNA helicase YTHDC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30545.30545.4 20.25 20.25 1.115 8 1 1 0 1147.3329 4506.3612 S1183s TMT10 1155 (R) AIIAVLSTEEQSAGLQQPSGIGQRPRPMsSEELPLASSWR (S) AIIAVLS(0.0)T(0.0)EEQS(0.0)AGLQQPS(0.0)GIGQRPRPMS(0.99)S(0.0)EELPLAS(0.0)S(0.0)WR s:Phosphorylated S YTHDC2 161671.9 3 5 668.1 249.65 HUMAN 1 -7.7746 -14.967 GQRSLVGSEGLSKEQ-p Q86UU0;S396-p GQRSLVGSEGLSKEQ 0.396805899749098 0.201500233809789 -0.116333333333333 -0.137 7.41056062031198 9.15331817644339 -0.116333333333333 -0.137 0.18152813173442 0.121525714277393 -1.53270538445285 -1.83423418129011 Q86UU0 BCL9L Q86UU0.S396.p_BCL9L Q86UU0_S396s _1_1_396_396 Q86UU0 Q86UU0 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17246.17246.2 12.12 5.67 3.42 3 1 1 0 757.9163 1434.8568 S396s TMT10 392 (R) SLVGsEGLSK (E) S(0.0)LVGS(0.99)EGLS(0.0)K K:TMT10,s:Phosphorylated S BCL9L 157526.3 1 7 139.1 524.37 HUMAN 1 -7.4106 -9.1533 GQRYGPLSEPGSARA-p Q9H1Z4;S70-p GQRYGPLSEPGSARA 0.729757185802638 0.191592734526852 0.0623333333333333 0.194333333333333 2.59534698327581 9.43717919071023 0.0623333333333333 0.194333333333333 0.550129965652604 0.113836643221662 0.63695216520407 1.88335815395806 Q9H1Z4 WDR13 Q9H1Z4.S70.p_WDR13 Q9H1Z4_S70sS74s_2_2_70_74 Q9H1Z4 Q9H1Z4 WD repeat-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14801.14801.3 10.15 10.15 6.424 3 2 2 0 508.2222 1362.7215 S70s S74s TMT10 66 (R) YGPLsEPGsAR (A) Y(0.0)GPLS(0.99)EPGS(0.99)AR s:Phosphorylated S WDR13 54322.7 2 5 3757.1 43.8 HUMAN 1 2.5953 9.4372 GQSFRSFSFEKPRQP-p P78314-4;S484-p GQSFRSFSFEKPRQP 0.182003668118224 0.354075794036297 0.235666666666667 -0.137333333333333 14.565841303525 5.97831393935576 0.235666666666667 -0.137333333333333 0.0349474803727075 0.252446065313989 2.79741399694791 -1.28039584676858 P78314 SH3BP2 P78314.4.S484.p_SH3BP2 P78314-4_S484s _1_1_484_484 P78314-4 P78314-4|P78314-3 Isoform 4 of SH3 domain-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15675.15675.3 11.21 6.63 2.262 2 1 1 0 512.6053 1455.836 S484s TMT10 482 (R) SFsFEKPR (Q) S(0.0)FS(0.99)FEKPR K:TMT10,s:Phosphorylated S SH3BP2 68698.6 1 5 1751.1 117.58 HUMAN 1 14.5658 -5.9783 GQSINVHTPNSQKVD-p Q86Y07;T336-p GQSINVHTPNSQKVD 0.224262912799076 0.00266411370065118 0.204 -0.919333333333333 12.4739459692856 39.1244068526988 0.204 -0.919333333333334 0.0565725041636996 0.000122337419267858 2.4166926611835 -9.74442052960126 Q86Y07 VRK2 Q86Y07.T336.p_VRK2 Q86Y07_T336t _1_1_336_336 Q86Y07 Q86Y07|Q86Y07-3|Q86Y07-2 Serine/threonine-protein kinase VRK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8585.8585.4 14.1 14.1 4.787 4 1 1 0 684.3682 2654.4829 T336t TMT10 329 (K) GQSINVHtPNSQKVDSQK (A) GQS(0.0)INVHT(0.99)PNS(0.0)QKVDS(0.0)QK K:TMT10,t:Phosphorylated T VRK2 58595.9 2 1 4705.1 27.69 HUMAN 1 12.4739 -39.1244 GQSSGAASPGLFQAG-p P49757-7;S230-p GQSSGAASPGLFQAG 0.255498822846135 0.0155990138325339 0.262333333333333 0.507 11.2686383660501 24.9797458921383 0.262333333333333 0.507 0.0746682827541402 0.00317705995657003 2.20324105645475 5.03237445700743 P49757 NUMB P49757.7.S230.p_NUMB P49757-7_S230s _1_1_230_230 P49757-7 P49757-7|P49757-8 Isoform 7 of Protein numb homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13525.13525.3 15.12 11.4 2.28 4 1 1 0 856.0757 2486.2486 S230s TMT10 219 (K) GTEWGQSSGAAsPGLFQAGHRR (T) GT(0.0)EWGQS(0.0)S(0.0)GAAS(0.99)PGLFQAGHRR s:Phosphorylated S NUMB 50767.3 1 14 538.3 277.23 HUMAN 1 11.2686 24.9797 GQTARGGSPGSDRVS-p Q76L83;S714-p GQTARGGSPGSDRVS 0.358501329477739 0.0794242405929809 0.134666666666667 0.226666666666667 8.27821841729286 14.5959332729044 0.134666666666667 0.226666666666667 0.148654533465615 0.0347061686389903 1.68339282493605 2.80123821367733 Q76L83 ASXL2 Q76L83.S714.p_ASXL2 Q76L83_S714s _1_1_714_714 Q76L83 Q76L83|E7EWD6|Q76L83-2 Putative Polycomb group protein ASXL2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12547.12547.4 16.17 11.56 1.995 7 1 1 0 753.6367 2931.5536 S714s TMT10 712 (R) GGsPGSDRVSETGKGPTLELAGTGSR (G) GGS(0.99)PGS(0.0)DRVS(0.0)ET(0.0)GKGPT(0.0)LELAGT(0.0)GS(0.0)R K:TMT10,s:Phosphorylated S ASXL2 155129.4 5 12 293.1 380.51 HUMAN 1 8.2782 14.5959 GQTTGKGSISLKELN-p Q9Y6B6;S162-p GQTTGKGSISLKELN 0.901278186084599 0.407044030217101 0.021 -0.122666666666667 0.885916161059834 5.19480418189722 0.021 -0.122666666666667 0.81547074226962 0.302356689639396 0.245011684781329 -1.1394021400619 Q9Y6B6 SAR1B Q9Y6B6.S162.p_SAR1B Q9Y6B6_S162s _1_1_162_162 Q9Y6B6 Q9Y6B6|Q9H029 GTP-binding protein SAR1b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25410.25410.3 16.5 16.5 1.13 5 1 1 0 895.4836 2604.4674 S162s TMT10 149 (R) EMFGLYGQTTGKGsISLK (E) EMFGLY(0.0)GQT(0.0)T(0.0)GKGS(0.99)IS(0.0)LK K:TMT10,s:Phosphorylated S SAR1B 22523.6 3 1 5759.1 16.5 HUMAN 1 0.8859 -5.1948 GQTTKAPSEAEPAAD-p O60784-2;S314-p GQTTKAPSEAEPAAD 0.20055874973276 0.829207317287553 0.312333333333333 0.031 13.5693870845119 1.13631404294395 0.312333333333333 0.031 0.0439603651886848 0.769783496056159 2.61419145306113 0.30769942439296 O60784 TOM1 O60784.2.S314.p_TOM1 O60784-2_S314s _1_1_314_314 O60784-2 O60784-2|O60784-4|O60784-3 Isoform 2 of Target of Myb protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33033.33033.4 9.83 9.83 9.833 7 1 1 0 1027.4883 4026.9586 S314s TMT10 312 (K) APsEAEPAADLIDMGPDPAATGNLSSQLAGMNLGSSSVR (A) APS(0.99)EAEPAADLIDMGPDPAAT(0.0)GNLS(0.0)S(0.0)QLAGMNLGS(0.0)S(0.0)S(0.0)VR s:Phosphorylated S TOM1 54158.9 1 3 1385.1 148 HUMAN 1 13.5694 1.1363 GRAGGPATPLSPTRL-p Q03252;T34-p GRAGGPATPLSPTRL 0.202511086688972 0.928193312474012 0.236666666666667 0.0143333333333333 13.4558163603246 0.455799902813452 0.236666666666667 0.0143333333333333 0.0451251193916215 0.900367913727264 2.59353617286599 0.13117344836413 Q03252 LMNB2 Q03252.T34.p_LMNB2 Q03252_T34t _1_1_34_34 Q03252 Q03252 Lamin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8865.8865.3 8.54 8.54 8.538 3 1 1 0 478.5835 1353.7688 T34t TMT10 29 (R) AGGPAtPLSPTR (L) AGGPAT(0.99)PLS(0.0)PT(0.0)R t:Phosphorylated T LMNB2 70061.3 1 20 440.2 312.01 HUMAN 1 13.4558 0.4558 GRAGRGLSGPCRPPP-p Q9UEE5;S28-p GRAGRGLSGPCRPPP 0.868689771390984 0.126560091121748 0.0433333333333333 0.287333333333333 1.19322009568465 11.8337656421874 0.0433333333333333 0.287333333333333 0.759762738597084 0.0655576588245737 0.321667265514099 2.30175371749228 Q9UEE5 STK17A Q9UEE5.S28.p_STK17A Q9UEE5_S28s _1_1_28_28 Q9UEE5 Q9UEE5 Serine/threonine-protein kinase 17A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8579.8784.3 12.93 7.07 99 1 1 1 0 632.6551 1815.9849 S28s TMT10 26 (R) GLsGPCRPPPPPQAR (G) GLS(1.0)GPCRPPPPPQAR C:Carbamidomethylation,s:Phosphorylated S STK17A 46956.7 3 2 4660.1 28.3 HUMAN 1 1.1932 11.8338 GRAKGSETPGATPGS-p O75533;T244-p GRAKGSETPGATPGS 0.276322361958096 0.0395592518987328 0.361 -0.261666666666667 10.5623886537073 18.8143031650625 0.361 -0.261666666666667 0.0878539180485014 0.0131392229973693 2.0796088571646 -3.62584161721018 O75533 SF3B1 O75533.T244.p_SF3B1 O75533_T244t _1_1_244_244 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6688.6688.3 15.02 12.84 2.193 4 1 1 0 542.944 1546.8477 T244t TMT10 241 (K) GSEtPGATPGSK (I) GS(0.0)ET(0.99)PGAT(0.0)PGS(0.0)K K:TMT10,t:Phosphorylated T SF3B1 146569.5 3 13 53.1 735.77 HUMAN 1 10.5624 -18.8143 GRALSAGSPPVPPGW-p P56177;S209-p GRALSAGSPPVPPGW 0.841819528641892 0.0751232660088097 -0.029 0.221666666666667 1.44683995670546 14.9208184947982 -0.029 0.221666666666667 0.716664685016358 0.0322046178849202 -0.382490173956675 2.86175842984496 P56177 DLX1 P56177.S209.p_DLX1 P56177_S209s _1_1_209_209 P56177 P56177 Homeobox protein DLX-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21945.21945.3 17.62 16.21 2.136 5 1 1 0 849.1019 2465.3189 S209s TMT10 204 (R) ALSAGsPPVPPGWNPNSSSGK (G) ALS(0.0)AGS(0.99)PPVPPGWNPNS(0.0)S(0.0)S(0.0)GK K:TMT10,s:Phosphorylated S DLX1 27376.2 1 1 5628.1 17.62 HUMAN 1 -1.4468 14.9208 GRAPRRASSGLPRNT-p Q9UJZ1;S29-p GRAPRRASSGLPRNT 0.659007682953711 0.00994130061946245 0.0776666666666667 0.492666666666667 3.3978750150653 28.1489043106669 0.0776666666666666 0.492666666666667 0.457311895700007 0.00153147379121403 0.800128831547889 5.87953435234186 Q9UJZ1 STOML2 Q9UJZ1.S29.p_STOML2 Q9UJZ1_S29s _1_1_29_29 Q9UJZ1 Q9UJZ1|Q9UJZ1-2 Stomatin-like protein 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4108.4108.3 7.27 7.27 1.134 2 1 1 0 384.8743 1072.6425 S29s TMT10 27 (R) RAsSGLPR (N) RAS(0.99)S(0.0)GLPR s:Phosphorylated S STOML2 38647.5 1 1 3350.1 53.17 HUMAN 1 3.3979 28.1489 GRAQGVRSPLLRQSS-p O60343-2;S666-p GRAQGVRSPLLRQSS 0.0447859715508879 0.0015175837239283 -0.506333333333333 -0.983 29.8849631658402 45.4891468598258 -0.506333333333333 -0.983 0.00102684214066824 2.82543495671382e-05 -6.39719956963388 -12.8989852534584 O60343 TBC1D4 O60343.2.S666.p_TBC1D4 O60343-2_S666s _1_1_666_666 O60343-2 O60343|O60343-3|O60343-2 Isoform 2 of TBC1 domain family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8568.8775.3 10.94 10.94 99 1 1 1 0 469.2682 1325.8215 S666s TMT10 661 (R) AQGVRsPLLR (Q) AQGVRS(1.0)PLLR s:Phosphorylated S TBC1D4 141150.8 2 12 603.1 262.97 HUMAN 1 -29.885 -45.4891 GRAQRVPSPGPPTLT-p F8W130;S334-p GRAQRVPSPGPPTLT 0.577253571803451 0.0310889125388133 0.078 -0.397 4.38961005992352 20.3720635204686 0.078 -0.397 0.363947712441031 0.00917896360689113 0.990909021366736 -3.95546859102967 F8W130 TROAP F8W130.S334.p_TROAP F8W130_S334s _1_1_334_334 F8W130 F8W130|Q12815|F8W1U0 Tastin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25297.25297.3 16.52 16.52 8.251 6 1 1 0 660.6868 1900.0741 S334s TMT10 332 (R) VPsPGPPTLTSYSVLR (R) VPS(0.99)PGPPT(0.0)LT(0.0)S(0.0)Y(0.0)S(0.0)VLR s:Phosphorylated S TROAP 95330.1 5 3 1545.1 132.83 HUMAN 1 4.3896 -20.3721 GRARGQDTPKPAGQH-p Q8NC74;T455-p GRARGQDTPKPAGQH 0.145152146047681 0.0603414544237694 0.262 0.253333333333333 17.0911616990593 16.2441246001493 0.262 0.253333333333333 0.0195381675728873 0.0237458401527805 3.28061149748856 3.11296486415078 Q8NC74 RBBP8NL Q8NC74.T455.p_RBBP8NL Q8NC74_T455t _1_1_455_455 Q8NC74 Q8NC74 RBBP8 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9086.9086.5 7.39 6.13 7.388 8 1 1 0 797.8055 3905.0306 T455t TMT10 452 (R) GQDtPKPAGQHGSLSPAAAHTASPEPPTQSGPLTR (S) GQDT(0.99)PKPAGQHGS(0.0)LS(0.0)PAAAHT(0.0)AS(0.0)PEPPT(0.0)QS(0.0)GPLT(0.0)R K:TMT10,t:Phosphorylated T RBBP8NL 71886.7 2 12 565.1 270.89 HUMAN 1 17.0912 16.2441 GRARQYTSPEEIDAQ-p Q13442;S19-p GRARQYTSPEEIDAQ 0.575937887306407 0.462719850454723 0.121 0.0696666666666667 4.40862475205496 4.46184902688973 0.121 0.0696666666666667 0.362357725369211 0.357944008500245 0.994476170548194 1.00426056770239 Q13442 PDAP1 Q13442.S19.p_PDAP1 Q13442_S19s _1_1_19_19 Q13442 Q13442|F8WBW6 28 kDa heat- and acid-stable phosphoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20903.20903.3 12.99 10.22 1.157 3 1 1 0 796.7296 2308.2073 S19s TMT10 16 (R) QYTsPEEIDAQLQAEK (Q) QY(0.0)T(0.0)S(0.99)PEEIDAQLQAEK K:TMT10,s:Phosphorylated S PDAP1 20629.7 3 1 1837.1 111.85 HUMAN 1 4.4086 4.4618 GRASSHSSQTQGGGS-p P02545;S407-p GRASSHSSQTQGGGS 0.0160165243485592 0.0010212605030329 -0.895333333333333 -1.19233333333333 42.327117492927 51.605082334249 -0.895333333333333 -1.19233333333333 5.85178350897336e-05 6.91021828777367e-06 -11.2572740722977 -16.8194662322582 P02545 LMNA P02545.S407.p_LMNA P02545_S407s _1_1_407_407 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4047.4047.3 15.99 15.99 2.277 7 1 1 0 686.3405 1977.0402 S407s TMT10 402 (R) ASSHSsQTQGGGSVTK (K) AS(0.0)S(0.0)HS(0.0)S(0.99)QT(0.0)QGGGS(0.0)VT(0.0)K K:TMT10,s:Phosphorylated S LMNA 74423.5 12 21 60.1 706.83 HUMAN 1 -42.3271 -51.6051 GRASYGVSKGKVCFE-p Q00839;S330-p GRASYGVSKGKVCFE 0.625010568942101 0.250866356481305 -0.0913333333333333 0.136666666666667 3.79140488138875 7.91185786823409 -0.0913333333333334 0.136666666666667 0.417695226275975 0.161738798726887 -0.877040398235357 1.61935917395286 Q00839 HNRNPU Q00839.S330.p_HNRNPU Q00839_S330s _1_1_330_330 Q00839 Q00839|Q00839-2|A0A1W2PPS1 Heterogeneous nuclear ribonucleoprotein U HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9601.9601.2 10.5 4.74 4.288 3 1 1 0 625.3326 1169.693 S330s TMT10 325 (R) ASYGVsK (G) AS(0.0)Y(0.0)GVS(0.99)K K:TMT10,s:Phosphorylated S HNRNPU 91324.5 1 10 657.1 253.07 HUMAN 1 -3.7914 7.9119 GRAWYKGSPKHPIGK-p Q6P4F7;S1004-p GRAWYKGSPKHPIGK 0.28377835512685 0.00228507318754895 -0.291333333333333 -1.11966666666667 10.3242136129712 40.7587487939303 -0.291333333333333 -1.11966666666667 0.0928065521877144 8.39701870492207e-05 -2.03809805145724 -10.4779600471039 Q6P4F7 ARHGAP11A Q6P4F7.S1004.p_ARHGAP11A Q6P4F7_S1004s _1_1_1004_1004 Q6P4F7 Q6P4F7|Q6P4F7-3 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13731.13731.3 9.76 9.76 9.763 2 1 1 0 568.6546 1623.9826 S1004s TMT10 999 (R) AWYKGsPK (H) AWY(0.0)KGS(0.99)PK K:TMT10,s:Phosphorylated S ARHGAP11A 114948.2 1 20 414.1 321.53 HUMAN 1 -10.3242 -40.7587 GRCNYSQSERNLCKY-p C9J6P4;S101-p GRCNYSQSERNLCKY 0.827997063487557 0.960422410004399 0.044 0.00766666666666671 1.57591713797625 0.252878063406017 0.044 0.00766666666666676 0.69567802672008 0.943435455730319 0.412693842225306 0.0743005789726174 C9J6P4 ZC3HAV1 C9J6P4.S101.p_ZC3HAV1 C9J6P4_S101s _1_1_101_101 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7365.7365.3 14.43 14.43 2.243 3 1 1 0 699.6618 2016.9996 S101s TMT10 96 (R) CNYSQsERNLCK (Y) CNY(0.0)S(0.0)QS(0.99)ERNLCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZC3HAV1 115909.2 1 1 361.1 343.37 HUMAN 1 1.5759 0.2529 GRDEAEMSPVVERKG-p A6NDB9;S420-p GRDEAEMSPVVERKG 0.352995852382669 0.164721327820138 0.136333333333333 0.170333333333333 8.39848707732405 10.298523407092 0.136333333333333 0.170333333333333 0.14459433966607 0.0933571659416742 1.7042268945516 2.03277540869194 A6NDB9 PALM3 A6NDB9.S420.p_PALM3 A6NDB9_S420s _1_1_420_420 A6NDB9 A6NDB9 Paralemmin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11581.11581.5 20.23 15.96 3.362 4 1 1 0 801.0106 3921.0301 S420s Hydrogen 397 (R) KAEESMGIGSEEKPGTGRDEAEMsPVVERK (G) KAEES(0.0)MGIGS(0.0)EEKPGT(0.0)GRDEAEMS(0.99)PVVERK K:TMT10-Lys-Only,s:Phosphorylated S PALM3 72036.5 4 6 888.1 205.52 HUMAN 1 8.3985 10.2985 GRDPPDPYVSLLLLP-p Q9BSJ8-2;Y1019-p GRDPPDPYVSLLLLP 0.862492352854935 0.547740166870021 0.026 -0.0863333333333333 1.25548315104051 3.51547822670621 0.026 -0.0863333333333333 0.748948033678021 0.4450944483043 0.336790484665211 -0.823173120180575 Q9BSJ8 ESYT1 Q9BSJ8.2.Y1019.p_ESYT1 Q9BSJ8-2_Y1019y _1_1_1019_1019 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26676.26676.4 15.5 11.81 3.423 2 1 1 0 669.6103 2595.4547 Y1019y TMT10 1010 (R) QNGRDPPDPyVSLLLLPDK (N) QNGRDPPDPY(0.99)VS(0.0)LLLLPDK K:TMT10,y:Phosphorylated Y ESYT1 124514 2 9 400.1 328.2 HUMAN 1 1.2555 -3.5155 GRDRSAASPVVSSMP-p P18583-5;S1769-p GRDRSAASPVVSSMP 0.885820345057877 0.449445310509768 -0.026 0.121 1.03778016578998 4.62981466032115 -0.026 0.121 0.787448179737611 0.344364626567703 -0.283328519430774 1.03556445800862 P18583 SON P18583.5.S1769.p_SON P18583-5_S1769s _1_1_1769_1769 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-2|P18583-6 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11811.11811.2 16.37 11.42 1.489 4 1 1 0 813.8918 1546.8097 S1769s TMT10 1766 (R) SAAsPVVSSMPER (A) S(0.0)AAS(0.99)PVVS(0.0)S(0.0)MPER s:Phosphorylated S SON 267429.6 8 28 45.1 778.56 HUMAN 1 -1.0378 4.6298 GRDSWEHSPYARREE-p Q5T481;S679-p GRDSWEHSPYARREE 0.776720786781132 0.741652973959089 0.072 0.039 2.10607210300863 1.78925475106766 0.072 0.039 0.615733509860492 0.662330149743564 0.532166403327227 0.461556534394921 Q5T481 RBM20 Q5T481.S679.p_RBM20 Q5T481_S679s _1_1_679_679 Q5T481 Q5T481 RNA-binding protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11000.11000.4 11.17 11.17 4.814 3 1 1 0 579.0077 2233.0372 S679s TMT10 667 (R) ADWGNGRDSWEHsPYAR (R) ADWGNGRDS(0.0)WEHS(0.99)PY(0.0)AR s:Phosphorylated S RBM20 135496 2 4 522.1 283.33 HUMAN 1 2.1061 1.7893 GRDTSLGSPKESENA-p O75140-4;S445-p GRDTSLGSPKESENA 0.465616510186216 0.12136157486968 0.0973333333333333 0.168 6.12510822216706 12.0773914729732 0.0973333333333333 0.168 0.244055825083048 0.0619813245162393 1.30682007709122 2.34489032674136 O75140 DEPDC5 O75140.4.S445.p_DEPDC5 O75140-4_S445s_1_1_445_445 O75140-4 O75140|O75140-9|O75140-4|O75140-1|O75140-5|O75140-8|O75140-6|O75140-2 Isoform 4 of GATOR complex protein DEPDC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7107.7107.4 9.56 6.56 3.422 3 1 1 0 525.5433 2018.1961 N437n S445s TMT10 435 (K) AKnGRDTSLGsPK (E) AKN(1.0)GRDT(0.0)S(0.0)LGS(0.99)PK K:TMT10,n:Deamidated,s:Phosphorylated S DEPDC5 180421.4 6 1 935.1 198.76 HUMAN 1 6.1251 12.0774 GREDMDISKSAEEPQ-p P49321-3;S191-p GREDMDISKSAEEPQ 0.222950846286183 0.00226405176805331 -0.436666666666667 -0.970666666666667 12.5334515844623 40.9439147385583 -0.436666666666667 -0.970666666666667 0.0558026523140559 8.04652798667246e-05 -2.42732735414829 -10.5641794674781 P49321 NASP P49321.3.S191.p_NASP P49321-3_S191s _1_1_191_191 P49321-3 P49321-3|P49321-4 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9077.9077.3 10.01 6.21 99 1 1 1 0 549.2727 1565.8358 S191s TMT10 183 (K) GGREDMDIsK (S) GGREDMDIS(1.0)K K:TMT10,s:Phosphorylated S NASP 86552 1 6 87.1 626.46 HUMAN 1 -12.5335 -40.9439 GREEKNKSPAAVTEP-p O75449;S170-p GREEKNKSPAAVTEP 0.205745646167926 0.0145535069518938 -0.296666666666667 0.417666666666667 13.2780781784097 25.4416923185972 -0.296666666666667 0.417666666666667 0.0470102090174802 0.00285647724082822 -2.56129795851738 5.14994445177584 O75449 KATNA1 O75449.S170.p_KATNA1 O75449_S170s _1_1_170_170 O75449 O75449 Katanin p60 ATPase-containing subunit A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15176.15176.4 18.5 12.59 5.9 6 1 1 0 849.6925 3315.7879 S170s TMT10 168 (K) NKsPAAVTEPETNKFDSTGYDK (D) NKS(0.99)PAAVT(0.0)EPET(0.0)NKFDS(0.0)T(0.0)GY(0.0)DK K:TMT10,s:Phosphorylated S KATNA1 56249.1 2 3 4042.1 38.71 HUMAN 1 -13.2781 25.4417 GREFDDLSPEQQRQA-p Q93084-5;S662-p GREFDDLSPEQQRQA 0.407878856431238 0.299040184050562 0.168666666666667 -0.109 7.18764390978502 6.92282984299425 0.168666666666667 -0.109 0.191088965381694 0.20310331677489 1.49382096743762 -1.44710271901267 Q93084 ATP2A3 Q93084.5.S662.p_ATP2A3 Q93084-5_S662s _1_1_662_662 Q93084-5 Q93084-5|Q93084-6|Q93084-7|Q93084-3|Q93084-2|Q93084-4 Isoform SERCA3E of Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12896.12896.3 12.14 12.14 5.817 3 1 1 0 741.0101 2141.0461 S662s TMT10 652 (K) AYTGREFDDLsPEQQR (Q) AY(0.0)T(0.0)GREFDDLS(0.99)PEQQR s:Phosphorylated S ATP2A3 116411.9 2 12 1240.2 162.94 HUMAN 1 7.1876 -6.9228 GREKTMSSDDEDCSA-p Q9NVR2;S382-p GREKTMSSDDEDCSA 0.492994289859056 0.308278005980267 -0.122666666666667 0.102 5.65616019060465 6.75442487079455 -0.122666666666667 0.102 0.271884206738376 0.211133677823349 -1.22306011868363 1.41757637425727 Q9NVR2 INTS10 Q9NVR2.S382.p_INTS10 Q9NVR2_S382s _1_1_382_382 Q9NVR2 Q9NVR2 Integrator complex subunit 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7914.7914.2 13.36 13.36 1.104 4 1 1 0 942.394 1803.8141 S382s TMT10 379 (K) TMSsDDEDCSAK (G) T(0.0)MS(0.0)S(0.99)DDEDCS(0.0)AK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S INTS10 83261.5 5 2 3258.1 55.7 HUMAN 1 -5.6562 6.7544 GRELRRMSDEFVDSF-p Q92934;S118-p GRELRRMSDEFVDSF 0.00956415249523423 0.00714231278100688 -1.19566666666667 -1.12833333333333 47.6626563192506 30.7343882416482 -1.19566666666667 -1.12833333333333 1.71290930300429e-05 0.000844425181429728 -14.2210649150915 -6.64783383992291 Q92934 BAD Q92934.S118.p_BAD Q92934_S118s _1_1_118_118 Q92934 Q92934 Bcl2-associated agonist of cell death HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18584.18584.4 12.73 12.73 12.729 2 1 1 0 564.7984 2176.2039 S118s TMT10 116 (R) RMsDEFVDSFKK (G) RMS(0.99)DEFVDS(0.0)FKK K:TMT10,s:Phosphorylated S BAD 18391.6 11 4 1955.1 105.21 HUMAN 1 -47.6627 -30.7344 GRELTPASPTCTNSV-p R4GMW8;S980-p GRELTPASPTCTNSV 0.326351385633394 0.0227213530781316 -0.166 0.342666666666667 9.1092764565356 22.4434445571129 -0.166 0.342666666666667 0.122764374207321 0.00569712232284918 -1.82728094066096 4.41928195522183 R4GMW8 NotFound R4GMW8.S980.p_NotFound R4GMW8_S980s _1_1_980_980 R4GMW8 R4GMW8|A0A1W2PS85|P28715 BIVM-ERCC5 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10303.10303.2 15.08 15.08 2.146 6 1 1 0 950.9492 1820.9261 S980s Hydrogen 975 (R) ELTPAsPTCTNSVSK (N) ELT(0.0)PAS(0.99)PT(0.0)CT(0.0)NS(0.0)VS(0.0)K C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S BIVM-ERCC5 185876.1 12 10 561.1 271.77 HUMAN 1 -9.1093 22.4434 GREPDPDSDWEPEER-p Q9NPE2;S41-p GREPDPDSDWEPEER 0.201994258111477 0.0833872115874586 0.197666666666667 0.244 13.491312788456 14.282290356586 0.197666666666667 0.244 0.0447577989532129 0.0373053367227876 2.59998723410745 2.74321036764083 Q9NPE2 NGRN Q9NPE2.S41.p_NGRN Q9NPE2_S41s _1_1_41_41 Q9NPE2 Q9NPE2|Q9NPE2-3 Neugrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16962.16962.4 18.92 18.19 99 1 1 1 0 693.5684 2691.2848 S41s TMT10 26 (R) GVAGPGPIGREPDPDsDWEPEER (E) GVAGPGPIGREPDPDS(1.0)DWEPEER s:Phosphorylated S NGRN 32521.1 2 1 3582.1 47.72 HUMAN 1 13.4913 14.2823 GRERGDESPLGAEGA-p A6NDB9;S375-p GRERGDESPLGAEGA 0.77431577737001 0.00586651472949607 0.0466666666666667 0.578 2.12614493476161 32.2514373167723 0.0466666666666667 0.578 0.612894192957993 0.000595465039129423 0.536559995017989 7.13503034652496 A6NDB9 PALM3 A6NDB9.S375.p_PALM3 A6NDB9_S375s _1_1_375_375 A6NDB9 A6NDB9 Paralemmin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8422.8422.3 16.83 14.05 99 1 1 1 0 651.9945 1874.002 S375s TMT10 370 (R) ERGDEsPLGAEGAK (T) ERGDES(1.0)PLGAEGAK K:TMT10,s:Phosphorylated S PALM3 72036.5 2 5 888.1 205.52 HUMAN 1 2.1261 32.2514 GRERLNSSENGEDRH-p Q7L4I2;S105-p GRERLNSSENGEDRH 0.175458928500627 0.00474018699637445 -0.420666666666667 -0.833 15.0385355398034 33.9846735107538 -0.420666666666667 -0.833 0.031343424602746 0.000399514594458927 -2.8856816745915 -7.72781318611209 Q7L4I2 RSRC2 Q7L4I2.S105.p_RSRC2 Q7L4I2_S105s _1_1_105_105 Q7L4I2 Q7L4I2|Q7L4I2-2 Arginine/serine-rich coiled-coil protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3788.3788.5 9.34 9.34 1.164 2 1 1 0 442.6213 2129.11 S105s TMT10 100 (R) ERLNSsENGEDRHK (R) ERLNS(0.0)S(0.99)ENGEDRHK K:TMT10,s:Phosphorylated S RSRC2 50615.9 1 5 1070.1 180.75 HUMAN 1 -15.0385 -33.9847 GRESDEDTEDASETD-p Q9H7L9;T49-p GRESDEDTEDASETD 0.771638354290043 0.0544554939916832 -0.082 0.279 2.15759184748799 16.8503262505397 -0.082 0.279 0.6084723041902 0.0206522500622668 -0.543425796823638 3.23077834112954 Q9H7L9 SUDS3 Q9H7L9.T49.p_SUDS3 Q9H7L9_S45sT49tS53s_3_3_45_53 Q9H7L9 Q9H7L9 Sin3 histone deacetylase corepressor complex component SDS3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22927.22927.5 16.76 16.76 2.613 6 3 3 0 1065.265 5082.3762 S45s T49t S53s TMT10 42 (R) GREsDEDtEDAsETDLAKHDEEDYVEMKEQMYQDK (L) GRES(0.99)DEDT(0.99)EDAS(0.99)ET(0.0)DLAKHDEEDY(0.0)VEMKEQMY(0.0)QDK K:TMT10,s:Phosphorylated S,t:Phosphorylated T SUDS3 38249.6 7 6 1096.1 178.23 HUMAN 1 -2.1576 16.8503 GRESPEGSYTDDANQ-p S4R347;S505-p GRESPEGSYTDDANQ 0.932437811523601 0.0443161463456812 -0.0213333333333333 0.647 0.602052509890064 18.1207134273183 -0.0213333333333334 0.647 0.870552062964174 0.0154144721443757 -0.170845310646572 3.48386037128276 S4R347 NotFound S4R347.S505.p_NotFound S4R347_S505s _1_1_505_505 S4R347 S4R347|Q5T0N5|Q5T0N5-5|Q5T0N5-2|Q5T0N5-4|Q5T0N5-3 Formin-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8670.8670.2 13.34 13.34 1.166 4 1 1 0 1053.4476 2025.9199 S505s TMT10 500 (R) ESPEGsYTDDANQEVR (G) ES(0.0)PEGS(0.99)Y(0.0)T(0.0)DDANQEVR s:Phosphorylated S FNBP1L 70981.3 2 6 1067.1 181.01 HUMAN 1 -0.6021 18.1207 GREVEEFSEDDDEDD-p Q9Y2W2;S353-p GREVEEFSEDDDEDD 0.0973600331101722 0.870006215796507 0.332 0.024 21.4529751290172 0.852457530717526 0.332 0.024 0.00715652985050576 0.821777501288449 4.19794707892123 0.236425315504197 Q9Y2W2 WBP11 Q9Y2W2.S353.p_WBP11 Q9Y2W2_S353sS361sS364s_3_3_353_364 Q9Y2W2 Q9Y2W2 WW domain-binding protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18812.19119.5 23.12 23.12 6.333 4 3 3 0 1006.8129 4790.1473 S353s S361s S364s TMT10 337 (R) MAGQEIPEEGREVEEFsEDDDEDDsDDsEAEKQSQK (Q) MAGQEIPEEGREVEEFS(0.99)EDDDEDDS(0.99)DDS(0.99)EAEKQS(0.0)QK K:TMT10,s:Phosphorylated S WBP11 69996.4 6 5 1858.1 110.79 HUMAN 1 21.453 0.8525 GRFFSSETTAAHSLV-p Q9HC98-2;T235-p GRFFSSETTAAHSLV 0.744043857023488 0.357800455290477 -0.045 0.14 2.43809265520459 5.92122210151884 -0.045 0.14 0.570414733371767 0.255786600398677 -0.60377457049673 1.27021876077295 Q9HC98 NEK6 Q9HC98.2.T235.p_NEK6 Q9HC98-2_T235tT236tS240s_3_3_235_240 Q9HC98-2 Q9HC98-2|Q9HC98-4|Q9HC98-3 Isoform 2 of Serine/threonine-protein kinase Nek6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30011.30011.3 8.56 8.56 1.204 9 3 3 0 1016.4224 2807.3548 T235t T236t S240s TMT10 230 (R) FFSSEttAAHsLVGTPYYMSPER (I) FFS(0.0)S(0.0)ET(0.99)T(0.99)AAHS(0.99)LVGT(0.0)PY(0.0)Y(0.0)MS(0.0)PER t:Phosphorylated T,s:Phosphorylated S NEK6 40528.1 2 4 5385.1 19.8 HUMAN 1 -2.4381 5.9212 GRFNGGHSPTHSPEK-p Q9Y5K6;S510-p GRFNGGHSPTHSPEK 0.820035286999767 0.780545485525606 0.0346666666666667 -0.029 1.66057686607679 1.48945672513591 0.0346666666666667 -0.029 0.682248066256381 0.709666537195801 0.432249541555462 -0.392474007933325 Q9Y5K6 CD2AP Q9Y5K6.S510.p_CD2AP Q9Y5K6_S510s _1_1_510_510 Q9Y5K6 Q9Y5K6 CD2-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3710.3710.3 14.56 14.56 2.117 3 1 1 0 568.5967 1623.8077 S510s Hydrogen 505 (R) FNGGHsPTHSPEK (I) FNGGHS(0.99)PT(0.0)HS(0.0)PEK K:TMT10-Lys-Only,s:Phosphorylated S CD2AP 71678 22 7 413.1 321.76 HUMAN 1 1.6606 -1.4895 GRGAGWLSEDEDSPL-p P55201-2;S1082-p GRGAGWLSEDEDSPL 0.96776831271533 0.0664039637428481 0.006 0.218 0.276822253042542 15.666071439271 0.006 0.218 0.938248275160811 0.0271264433850679 0.0811386456670403 3.00226517108135 P55201 BRPF1 P55201.2.S1082.p_BRPF1 P55201-2_S1082s _1_1_1082_1082 P55201-2 P55201-2|P55201-3|P55201-4 Isoform 2 of Peregrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.37389.37389.2 23.75 23.75 1.158 2 1 1 0 1463.2162 2845.466 S1082s TMT10 1077 (R) GAGWLsEDEDSPLDALDLVWAK (C) GAGWLS(0.99)EDEDS(0.0)PLDALDLVWAK K:TMT10,s:Phosphorylated S BRPF1 139837.6 5 10 723.1 237.03 HUMAN 1 0.2768 15.6661 GRGDNWYSEDEDTDT-p B7WPL0;S468-p GRGDNWYSEDEDTDT 0.0559124300104654 0.0165705183711879 -0.492 -0.554 27.29999814457 24.5905646899224 -0.492 -0.554 0.00186208793219983 0.00347490976109734 -5.65088829991353 -4.93479308145733 B7WPL0 RIC8B B7WPL0.S468.p_RIC8B B7WPL0_S468s _1_1_468_468 B7WPL0 B7WPL0|Q9NVN3-1|Q9NVN3-3 Synembryn-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20377.20377.3 19.99 19.99 2.553 5 1 1 0 1086.8241 3178.4853 S468s TMT10 456 (R) GLLAGGRGDNWYsEDEDTDTEEYK (N) GLLAGGRGDNWY(0.0)S(0.99)EDEDT(0.0)DT(0.0)EEY(0.0)K K:TMT10,s:Phosphorylated S RIC8B 64291.7 2 2 2890.1 66.71 HUMAN 1 -27.3 -24.5906 GRGFPRRSPTAAAQP-p B7Z3J9;S74-p GRGFPRRSPTAAAQP 0.883932229691516 0.0228338152729574 0.026 -0.318333333333333 1.05700364486652 22.4078915472906 0.026 -0.318333333333333 0.783970345792767 0.0057439525720702 0.288116698147714 -4.41105572539583 B7Z3J9 NotFound B7Z3J9.S74.p_NotFound B7Z3J9_S74s _1_1_74_74 B7Z3J9 B7Z3J9 HCG2040265, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14186.14186.3 13.26 13.26 1.349 3 1 1 0 597.6626 1711.0064 S74s Hydrogen 73 (R) RsPTAAAQPASALKI (-) RS(0.99)PT(0.0)AAAQPAS(0.0)ALKI K:TMT10-Lys-Only,s:Phosphorylated S LOC730098 10047.4 1 1 6195.1 13.26 HUMAN 1 1.057 -22.4079 GRGGDPKSGDWVCPN-p Q92804;S355-p GRGGDPKSGDWVCPN 0.580309452426584 0.510176071179867 -0.0806666666666667 -0.065 4.34630023275101 3.91845838995709 -0.0806666666666667 -0.065 0.367595322665192 0.405652503889573 -0.982772991893645 -0.901360037566045 Q92804 TAF15 Q92804.S355.p_TAF15 Q92804_S355s _1_1_355_355 Q92804 Q92804|Q92804-2|A0A075B7D9 TATA-binding protein-associated factor 2N HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18916.18916.4 16.68 16.68 11.382 2 1 1 0 766.0946 2981.3857 S355s TMT10 350 (R) GGDPKsGDWVCPNPSCGNMNFAR (R) GGDPKS(0.99)GDWVCPNPS(0.0)CGNMNFAR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TAF15 62057.1 2 5 1461.1 140.26 HUMAN 1 -4.3463 -3.9185 GRGHTRDYPQYRDNK-p Q9Y520-7;Y1220-p GRGHTRDYPQYRDNK 0.533449520540402 0.00171684026921227 -0.197333333333333 -0.993 5.05186475587989 43.8482999295846 -0.197333333333333 -0.993 0.312473739208024 4.12258868590236e-05 -1.11355416764709 -12.0054681506671 Q9Y520 PRRC2C Q9Y520.7.Y1220.p_PRRC2C Q9Y520-7_Y1220y _1_1_1220_1220 Q9Y520-7 Q9Y520-7|Q9Y520-5|E7EPN9|Q9Y520-4|Q9Y520-6|Q9Y520-3|Q9Y520-2 Isoform 7 of Protein PRRC2C GG20160819_MSz_CCLE_T4D7_pY_Injection_02.5046.5046.3 10.76 4.81 5.454 2 1 1 0 587.616 1680.8655 Y1220y Hydrogen 1219 (R) DyPQYRDNKPR (A) DY(0.99)PQY(0.0)RDNKPR K:TMT10-Lys-Only,y:Phosphorylated Y PRRC2C 317703.2 5 1 163.1 20.62 HUMAN 1 -5.0519 -43.8483 GRGIITDSFGRHRRA-p Q9BSQ5;S384-p GRGIITDSFGRHRRA 0.43773303002828 0.05376337016788 0.122666666666667 -0.233 6.60924032486417 16.9240257896985 0.122666666666667 -0.233 0.218311175198705 0.0203047394512261 1.39242404009258 -3.24522694140445 Q9BSQ5 CCM2 Q9BSQ5.S384.p_CCM2 Q9BSQ5_S384s _1_1_384_384 Q9BSQ5 Q9BSQ5-2|A0A0A0MT72|Q9BSQ5-4|Q9BSQ5-3|C9JUH3 Cerebral cavernous malformations 2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17171.17377.2 10.29 10.29 1.476 2 1 1 0 637.8204 1194.668 S384s TMT10 379 (R) GIITDsFGR (H) GIIT(0.0)DS(0.99)FGR s:Phosphorylated S CCM2 49292.3 1 6 2227.1 92.63 HUMAN 1 6.6092 -16.924 GRGPAKASPQPALTV-p Q8N9M1;S306-p GRGPAKASPQPALTV 0.45060350179761 0.363947155398385 -0.136666666666667 -0.110666666666667 6.39523486768025 5.81877257326859 -0.136666666666667 -0.110666666666667 0.229338260031622 0.261892307794477 -1.35467905524807 -1.25192187449071 Q8N9M1 C19orf47 Q8N9M1.S306.p_C19orf47 Q8N9M1_S306s _1_1_306_306 Q8N9M1 Q8N9M1|Q8N9M1-2|Q8N9M1-3 Uncharacterized protein C19orf47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14796.14796.2 11.96 8.11 4.802 2 1 1 0 775.4415 1469.9092 S306s TMT10 305 (K) AsPQPALTVK (A) AS(0.99)PQPALT(0.0)VK K:TMT10,s:Phosphorylated S C19orf47 44916.7 4 4 1515.1 134.55 HUMAN 1 -6.3952 -5.8188 GRGPRRLSIEGNIAV-p Q16854;S42-p GRGPRRLSIEGNIAV 0.97158608608734 0.0504260799938781 0.00533333333333333 0.228666666666667 0.243916757737577 17.3379987686953 0.00533333333333333 0.228666666666667 0.94538416618881 0.0184586579918809 0.0717421235242285 3.32690756094589 Q16854 DGUOK Q16854.S42.p_DGUOK Q16854_S42s _1_1_42_42 Q16854 Q16854|Q16854-2 Deoxyguanosine kinase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18361.18361.3 7.68 7.68 99 1 1 1 0 599.0145 1715.058 S42s TMT10 40 (R) RLsIEGNIAVGK (S) RLS(1.0)IEGNIAVGK K:TMT10,s:Phosphorylated S DGUOK 32169.3 1 1 7110.1 7.68 HUMAN 1 0.2439 17.338 GRGRGDWSVGAPGGV-p Q96I24;S347-p GRGRGDWSVGAPGGV 0.289498276160622 0.958236065755365 0.167666666666667 -0.00566666666666667 10.1511209970116 0.26682549730555 0.167666666666667 -0.00566666666666668 0.0965801554984613 0.940410458306339 2.00797800261289 -0.0782834524487816 Q96I24 FUBP3 Q96I24.S347.p_FUBP3 Q96I24_S347s _1_1_347_347 Q96I24 Q96I24 Far upstream element-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26069.26069.3 15.36 14.85 2.413 4 1 1 0 929.1357 2705.4187 S347s TMT10 344 (R) GDWsVGAPGGVQEITYTVPADK (C) GDWS(0.99)VGAPGGVQEIT(0.0)Y(0.0)T(0.0)VPADK K:TMT10,s:Phosphorylated S FUBP3 61981.6 1 6 858.1 210.79 HUMAN 1 10.1511 -0.2668 GRGRPSKTPSPSQPK-p Q9NTI5;T1381-p GRGRPSKTPSPSQPK 0.227824784716705 0.290432263427124 -0.277333333333333 0.219333333333333 12.3489274161477 7.08631803841248 -0.277333333333333 0.219333333333333 0.0582246998464156 0.195599705316124 -2.39438191178254 1.47570167629152 Q9NTI5 PDS5B Q9NTI5.T1381.p_PDS5B Q9NTI5_T1381tS1383s_2_2_1381_1383 Q9NTI5 Q9NTI5|Q9NTI5-2 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4452.4452.5 8.11 8.11 1.418 4 2 2 0 469.2583 2182.3275 T1381t S1383s Hydrogen 1376 (R) GRPSKtPsPSQPKK (N) GRPS(0.0)KT(0.99)PS(0.99)PS(0.0)QPKK K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S PDS5B 165919.5 15 23 100.1 597.99 HUMAN 1 -12.3489 7.0863 GRGRRRVSEVEEEKE-p O43290;S448-p GRGRRRVSEVEEEKE 0.93698049113563 0.157323292581162 0.024 -0.187 0.549400447474377 10.56384368334 0.024 -0.187 0.881170512025472 0.0878244890209206 0.156688586629781 -2.07896798205537 O43290 SART1 O43290.S448.p_SART1 O43290_S448s _1_1_448_448 O43290 O43290 U4/U6.U5 tri-snRNP-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12618.12618.4 10.88 10.88 10.882 3 1 1 0 712.1021 2765.4155 S448s Hydrogen 446 (R) RVsEVEEEKEPVPQPLPSDDTR (V) RVS(0.99)EVEEEKEPVPQPLPS(0.0)DDT(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S SART1 90424.4 1 3 2155.1 95.34 HUMAN 1 0.5494 -10.5638 GRGTAQYSSQKSVEE-p Q99959;S131-p GRGTAQYSSQKSVEE 0.495718391587226 0.351803940420309 0.116333333333333 -0.0946666666666667 5.61278951407392 6.01388095803761 0.116333333333333 -0.0946666666666667 0.27461297217047 0.250387073497363 1.21526441063615 -1.28672923532406 Q99959 PKP2 Q99959.S131.p_PKP2 Q99959_S131s _1_1_131_131 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5859.5859.2 10.3 10.3 1.113 4 1 1 0 754.3832 1427.7895 S131s TMT10 126 (R) GTAQYsSQK (S) GT(0.0)AQY(0.0)S(0.99)S(0.0)QK K:TMT10,s:Phosphorylated S PKP2 97926.6 5 5 257.1 399.17 HUMAN 1 5.6128 -6.0139 GRHRRVYSDEGGKLS-p Q9Y2B5-2;S147-p GRHRRVYSDEGGKLS 0.126031491243466 0.00274835020135435 -0.404333333333333 -0.679333333333333 18.6835460239939 38.7908164243267 -0.404333333333333 -0.679333333333333 0.0135408334882918 0.00013210472689518 -3.6019472763816 -9.60056744274373 Q9Y2B5 VPS9D1 Q9Y2B5.2.S147.p_VPS9D1 Q9Y2B5-2_S147s _1_1_147_147 Q9Y2B5-2 Q9Y2B5-2|H3BM58 Isoform 2 of VPS9 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9243.9243.2 11.05 6.84 6.03 2 1 1 0 696.8441 1312.7149 S147s TMT10 145 (R) VYsDEGGK (L) VY(0.0)S(0.99)DEGGK K:TMT10,s:Phosphorylated S VPS9D1 74015.7 6 1 3597.1 47.47 HUMAN 1 -18.6835 -38.7908 GRHYRSNSPLPSIQL-p Q08174-2;S973-p GRHYRSNSPLPSIQL 0.456945741797906 0.151599623930871 0.105666666666667 -0.158 6.26603667579792 10.7726484432242 0.105666666666667 -0.158 0.236263336316493 0.0837018690203865 1.33182061068306 -2.11539416528349 Q08174 PCDH1 Q08174.2.S973.p_PCDH1 Q08174-2_S973s _1_1_973_973 Q08174-2 Q08174-2 Isoform 2 of Protocadherin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20526.20526.4 14.52 14.52 1.183 6 1 1 0 626.8336 2424.3499 S973s TMT10 971 (R) SNsPLPSIQLQPQSPSASK (K) S(0.0)NS(0.99)PLPS(0.0)IQLQPQS(0.0)PS(0.0)AS(0.0)K K:TMT10,s:Phosphorylated S PCDH1 134290.1 5 4 666.1 249.91 HUMAN 1 6.266 -10.7726 GRIAQSMSEANLIDM-p Q6ZN28;S19-p GRIAQSMSEANLIDM 0.285004423448828 0.810606315817002 -0.166333333333333 0.0246666666666667 10.2897141280519 1.27847975735123 -0.166333333333333 0.0246666666666667 0.0935467248736831 0.744992712077185 -2.03209172081646 0.342308668563643 Q6ZN28 MACC1 Q6ZN28.S19.p_MACC1 Q6ZN28_S19s _1_1_19_19 Q6ZN28 Q6ZN28 Metastasis-associated in colon cancer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25873.25873.3 15.87 15.87 1.22 2 1 1 0 782.721 2266.1823 S19s TMT10 14 (R) IAQSMsEANLIDMEAGK (L) IAQS(0.0)MS(0.99)EANLIDMEAGK K:TMT10,s:Phosphorylated S MACC1 97436.1 3 1 744.1 233.51 HUMAN 1 -10.2897 1.2785 GRILPPLSPPQHRYS-p A0A087WZY3;S92-p GRILPPLSPPQHRYS 0.791634956034985 0.391001868842412 -0.065 -0.105666666666667 1.95852966781465 5.42206027793728 -0.065 -0.105666666666667 0.637011148667921 0.286941901667447 -0.499598425914311 -1.180615339685 A0A087WZY3 NotFound A0A087WZY3.S92.p_NotFound A0A087WZY3_S92s _1_1_92_92 A0A087WZY3 A0A087WZY3|Q8TCU4|A0A087WTU9|Q8TCU4-2|A0A087WV20|Q8TCU4-3 Alstrom syndrome protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19237.19442.3 13.39 8.03 99 1 1 1 0 521.9589 1483.8946 S92s TMT10 87 (R) ILPPLsPPQHR (Y) ILPPLS(1.0)PPQHR s:Phosphorylated S ALMS1 463449.8 2 1 1397.1 146.67 HUMAN 1 -1.9585 -5.4221 GRIQEAGTEVVKAKA-p P40926;T235-p GRIQEAGTEVVKAKA 0.254379274023512 0.119955486556661 0.295666666666667 0.487 11.3151499344908 12.143397713784 0.295666666666667 0.487 0.0738728758908993 0.0610464239800911 2.21141581263793 2.35660301830503 P40926 MDH2 P40926.T235.p_MDH2 P40926_T235t _1_1_235_235 P40926 P40926|P40926-2|G3XAL0 Malate dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14281.14281.3 10.53 9.67 99 1 1 1 0 537.9639 1531.9096 T235t TMT10 230 (R) IQEAGtEVVK (A) IQEAGT(1.0)EVVK K:TMT10,t:Phosphorylated T MDH2 35959.1 1 4 2175.1 94.5 HUMAN 1 11.3151 12.1434 GRITKTESLVIPSTR-p Q86VP3-2;S416-p GRITKTESLVIPSTR 0.0832139716415161 0.0866632632202453 -0.351 -0.197333333333333 23.0794875141009 14.0607222609924 -0.351 -0.197333333333333 0.00492097601858462 0.0392579641330214 -4.57324336238259 -2.70244435472743 Q86VP3 PACS2 Q86VP3.2.S416.p_PACS2 Q86VP3-2_S416s _1_1_416_416 Q86VP3-2 Q86VP3-2|Q86VP3-3 Isoform 2 of Phosphofurin acidic cluster sorting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18301.18301.3 14.08 14.08 1.588 5 1 1 0 661.7142 1903.1628 S416s TMT10 411 (R) ITKTEsLVIPSTR (S) IT(0.0)KT(0.0)ES(0.99)LVIPS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S PACS2 100425.5 1 4 1483.1 138.31 HUMAN 1 -23.0795 -14.0607 GRIVPRFSELTAEKL-p P48643;S346-p GRIVPRFSELTAEKL 0.222958013593343 0.0595568291375996 -0.217333333333333 -0.231333333333333 12.5318681738306 16.3221450654532 -0.217333333333333 -0.231333333333333 0.0558230013228672 0.0233230580625416 -2.42704424108136 -3.12802682036543 P48643 CCT5 P48643.S346.p_CCT5 P48643_S346s _1_1_346_346 P48643 P48643|E9PCA1|B7ZAR1 T-complex protein 1 subunit epsilon HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24876.24876.3 13.11 13.11 2.481 2 1 1 0 643.3601 1848.0995 S346s TMT10 341 (R) IVPRFsELTAEK (L) IVPRFS(0.99)ELT(0.0)AEK K:TMT10,s:Phosphorylated S CCT5 60126.4 1 6 1610.1 127.7 HUMAN 1 -12.5319 -16.3221 GRKGLGGSDGEPASG-p Q9H6A9;S1947-p GRKGLGGSDGEPASG 0.874041515701776 0.0298857286302253 -0.024 0.303666666666667 1.14400281632294 20.6328704419248 -0.024 0.303666666666667 0.768421872791865 0.00864396412585067 -0.309619924997839 4.01219992003931 Q9H6A9 PCNXL3 Q9H6A9.S1947.p_PCNXL3 Q9H6A9_S1947s _1_1_1947_1947 Q9H6A9 Q9H6A9|Q9H6A9-3 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10288.10288.3 17.62 17.62 7.198 3 1 1 0 618.6408 1773.9383 S1947s TMT10 1943 (K) GLGGsDGEPASGSPK (G) GLGGS(0.99)DGEPAS(0.0)GS(0.0)PK K:TMT10,s:Phosphorylated S PCNX3 224430.8 2 21 168.1 492.45 HUMAN 1 -1.144 20.6329 GRKGSGDYMPMSPKS-p P35568;Y632-p GRKGSGDYMPMSPKS 0.0163284757072266 0.070481499801783 0.850666666666667 0.553333333333333 41.7661819517895 15.3170616199474 0.850666666666667 0.553333333333333 6.65858280337969e-05 0.0293963790009351 10.9818705831555 2.93616472714868 P35568 IRS1 P35568.Y632.p_IRS1 P35568_Y632y _1_1_632_632 P35568 P35568 Insulin receptor substrate 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.15189.15278.3 18.85 13.11 5.738 3 1 1 0 689.0207 1985.0803 Y632y TMT10 627 (R) KGSGDyMPMSPK (S) KGS(0.0)GDY(0.99)MPMS(0.0)PK K:TMT10,y:Phosphorylated Y IRS1 132786.8 9 2 28.1 63.43 HUMAN 1 41.7662 15.3171 GRKGTDDSMTLQSQK-p X6RAL5;S138-p GRKGTDDSMTLQSQK 0.974481101515204 0.462663228122581 0.00599999999999999 -0.0703333333333333 0.219477335777435 4.46314519505855 0.00599999999999998 -0.0703333333333333 0.950719203816805 0.357837194708772 0.0647219092601213 -1.00450297796105 X6RAL5 SAP18 X6RAL5.S138.p_SAP18 X6RAL5_S138s _1_1_138_138 X6RAL5 X6RAL5|O00422 Histone deacetylase complex subunit SAP18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10283.10283.3 11.99 11.99 1.147 4 1 1 0 736.0508 2126.173 S138s TMT10 133 (R) KGTDDsMTLQSQK (F) KGT(0.0)DDS(0.99)MT(0.0)LQS(0.0)QK K:TMT10,s:Phosphorylated S SAP18 19583.1 2 1 5000.1 24.01 HUMAN 1 0.2195 -4.4631 GRKKKYPSPQKTRSE-p Q9P2N5;S120-p GRKKKYPSPQKTRSE 0.260680838095412 0.0283447568358296 0.291666666666667 -0.358 11.0644447130114 20.9646548841103 0.291666666666667 -0.358 0.0782628265170773 0.00800819263778004 2.16740336668092 -4.08504248175 Q9P2N5 RBM27 Q9P2N5.S120.p_RBM27 Q9P2N5_S120s _1_1_120_120 Q9P2N5 Q9P2N5|U3KPZ7 RNA-binding protein 27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7764.7764.2 10.54 10.54 10.537 2 1 1 0 986.5926 1892.2139 S120s TMT10 116 (K) KKYPsPQK (T) KKY(0.0)PS(0.99)PQK K:TMT10,s:Phosphorylated S RBM27 119172.2 18 1 1221.1 164.77 HUMAN 1 11.0644 -20.9647 GRKKLTDSPGLFSAQ-p Q9NR48;S1630-p GRKKLTDSPGLFSAQ 0.424611816020753 0.949131134616042 -0.121333333333333 0.00866666666666669 6.85689770798143 0.325079726330696 -0.121333333333333 0.00866666666666669 0.206210240711477 0.927880456251423 -1.4359399246464 0.0947976226651114 Q9NR48 ASH1L Q9NR48.S1630.p_ASH1L Q9NR48_S1630s _1_1_1630_1630 Q9NR48 Q9NR48 Histone-lysine N-methyltransferase ASH1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19859.19859.3 16.02 16.02 1.808 5 1 1 0 830.0994 2408.3186 S1630s TMT10 1626 (K) KLTDsPGLFSAQDTSLNR (L) KLT(0.0)DS(0.99)PGLFS(0.0)AQDT(0.0)S(0.0)LNR K:TMT10,s:Phosphorylated S ASH1L 336378.7 1 14 245.1 412 HUMAN 1 -6.8569 0.3251 GRKKQPASPDGRTSP-p Q9P2R6;S594-p GRKKQPASPDGRTSP 0.146782194171833 0.189461926076447 0.261666666666667 -0.200666666666667 16.9289994954363 9.50039369999926 0.261666666666667 -0.200666666666667 0.020281499001092 0.112191674482574 3.24866368813769 -1.89430316980803 Q9P2R6 RERE Q9P2R6.S594.p_RERE Q9P2R6_S594s _1_1_594_594 Q9P2R6 Q9P2R6|B1AKN3|Q9P2R6-2 Arginine-glutamic acid dipeptide repeats protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.3887.3887.3 9.99 6.54 99 1 1 1 0 498.601 1413.8214 S594s TMT10 590 (K) KQPAsPDGR (T) KQPAS(1.0)PDGR K:TMT10,s:Phosphorylated S RERE 173561.6 4 4 278.1 389.04 HUMAN 1 16.929 -9.5004 GRKLRPISDDSESIE-p Q71F23;S136-p GRKLRPISDDSESIE 0.146008485171869 0.945896402365987 0.762666666666667 0.00700000000000001 17.0212977225295 0.345641159664477 0.762666666666667 0.00700000000000001 0.0198550153770668 0.923497840089311 3.26683075013934 0.100580732160432 Q71F23 CENPU Q71F23.S136.p_CENPU Q71F23_S136sS139s_2_2_136_139 Q71F23 Q71F23|Q71F23-3|Q09GN1 Centromere protein U HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14450.14450.3 8.31 8.31 1.101 5 2 2 0 780.0057 2178.0724 S136s S139s TMT10 132 (K) LRPIsDDsESIEESDTR (R) LRPIS(0.99)DDS(0.99)ES(0.0)IEES(0.0)DT(0.0)R s:Phosphorylated S CENPU 47749 2 13 1181.1 168.95 HUMAN 1 17.0213 0.3456 GRKPKERTPEEPVAK-p Q96KM6;T852-p GRKPKERTPEEPVAK 0.279591442705084 0.208915013709327 0.263 0.133333333333333 10.4615906002862 8.9445436501507 0.263 0.133333333333333 0.0899168201535979 0.127510407884681 2.06203122183519 1.79812051003774 Q96KM6 ZNF512B Q96KM6.T852.p_ZNF512B Q96KM6_T852t _1_1_852_852 Q96KM6 Q96KM6 Zinc finger protein 512B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7421.7421.3 8.76 8.76 99 1 1 1 0 565.3027 1613.9263 T852t TMT10 850 (K) ERtPEEPVAK (L) ERT(1.0)PEEPVAK K:TMT10,t:Phosphorylated T ZNF512B 98802.8 2 7 2035.1 101.41 HUMAN 1 10.4616 8.9445 GRKQYQDSPNQKKRT-p Q8IU60;S329-p GRKQYQDSPNQKKRT 0.0752440132125947 0.000952253650599092 0.362333333333333 -1.26866666666667 24.0347054294548 53.5641829117368 0.362333333333333 -1.26866666666667 0.00394938486081174 4.40130746916894e-06 4.8033788897786 -18.3018228452655 Q8IU60 DCP2 Q8IU60.S329.p_DCP2 Q8IU60_S329s _1_1_329_329 Q8IU60 Q8IU60 m7GpppN-mRNA hydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6212.6212.2 12.88 12.88 8.682 2 1 1 0 823.4036 1565.8324 S329s TMT10 325 (K) QYQDsPNQK (K) QY(0.0)QDS(0.99)PNQK K:TMT10,s:Phosphorylated S DCP2 49026.8 7 4 1279.1 158.9 HUMAN 1 24.0347 -53.5642 GRKRVLHSGSRDREK-p Q5T200;S1230-p GRKRVLHSGSRDREK 0.146847237055168 0.475992253129855 0.327666666666667 -0.092 16.9252450756529 4.30018744381427 0.327666666666667 -0.0919999999999999 0.0202990396761514 0.371519193784612 3.24792563733866 -0.973918973368042 Q5T200 ZC3H13 Q5T200.S1230.p_ZC3H13 Q5T200_S1230s _1_1_1230_1230 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3909.3909.2 7.94 4.84 1.575 2 1 1 0 532.7765 984.5788 S1230s TMT10 1227 (R) VLHsGSR (D) VLHS(0.99)GS(0.0)R s:Phosphorylated S ZC3H13 197316.7 6 25 24.1 987.82 HUMAN 1 16.9252 -4.3002 GRKSPPPSFCLEYTS-p Q68DQ2;S720-p GRKSPPPSFCLEYTS 0.722874382459012 0.72197682317235 0.0486666666666667 0.0396666666666667 2.66647638596098 1.9490479930015 0.0486666666666667 0.0396666666666667 0.541193237733129 0.638403413805258 0.651815745923115 0.497431335132612 Q68DQ2 CRYBG3 Q68DQ2.S720.p_CRYBG3 Q68DQ2_S720s _1_1_720_720 Q68DQ2 Q68DQ2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26340.26340.5 8.59 8.59 1.261 5 1 1 0 770.7991 3769.9979 S720s TMT10 707 (K) NHVEAAGRKSPPPsFCLEYTSAIFEFK (E) NHVEAAGRKS(0.0)PPPS(0.99)FCLEY(0.0)T(0.0)S(0.0)AIFEFK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CRYBG3 333308.2 5 8 582.1 265.87 HUMAN 1 2.6665 1.949 GRKVRVESGYFSLEK-p Q6WCQ1-2;S265-p GRKVRVESGYFSLEK 0.57602742215752 0.440181114040762 -0.0843333333333334 -0.093 4.40631845090816 4.74700668933298 -0.0843333333333334 -0.093 0.362550204898801 0.335196388726866 -0.994043666767102 -1.05728036974674 Q6WCQ1 MPRIP Q6WCQ1.2.S265.p_MPRIP Q6WCQ1-2_S265s _1_1_265_265 Q6WCQ1-2 Q6WCQ1-2|Q6WCQ1-3 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19227.19227.2 11.05 10.35 3.726 3 1 1 0 734.3528 1387.7307 S265s Hydrogen 263 (R) VEsGYFSLEK (T) VES(0.99)GY(0.0)FS(0.0)LEK K:TMT10-Lys-Only,s:Phosphorylated S MPRIP 118899.7 4 3 204.1 449.03 HUMAN 1 -4.4063 -4.747 GRLAQERSADFAELE-p Q9UNS1;S247-p GRLAQERSADFAELE 0.145835187369471 0.0923029493480819 -0.297 -0.347333333333333 17.0337839364978 13.6868118383222 -0.297 -0.347333333333333 0.0197980130575454 0.0427876875881842 -3.26929180347171 -2.63405699798598 Q9UNS1 TIMELESS Q9UNS1.S247.p_TIMELESS Q9UNS1_S247s _1_1_247_247 Q9UNS1 Q9UNS1|Q9UNS1-2 Protein timeless homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23347.23347.3 14.62 14.62 99 1 1 1 0 719.3708 2076.1287 S247s TMT10 242 (R) LAQERsADFAELEVLR (Q) LAQERS(1.0)ADFAELEVLR s:Phosphorylated S TIMELESS 139682.8 1 1 579.1 266.89 HUMAN 1 -17.0338 -13.6868 GRLFRPPSPAPAAPG-p Q86U90;S37-p GRLFRPPSPAPAAPG 0.985254053494622 0.0204174195388794 -0.003 -0.359 0.129700417489971 23.1349069360077 -0.00299999999999999 -0.359 0.97057691671237 0.00485857942167016 -0.0386216341341344 -4.58122203520194 Q86U90 YRDC Q86U90.S37.p_YRDC Q86U90_S37s _1_1_37_37 Q86U90 Q86U90 YrdC domain-containing protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15874.16288.3 14.28 9.88 99 1 1 1 0 605.3273 1734.0012 S37s TMT10 32 (R) LFRPPsPAPAAPGAR (L) LFRPPS(1.0)PAPAAPGAR s:Phosphorylated S YRDC 29726.7 5 1 3868.1 41.55 HUMAN 1 -0.1297 -23.1349 GRLGLGDSNNQSTLK-p Q15751;S440-p GRLGLGDSNNQSTLK 0.367571861538115 0.0678568952262553 -0.123 -0.213333333333333 8.06704156118563 15.5473656598848 -0.123 -0.213333333333333 0.156061524082938 0.0278781168452117 -1.64678857553652 -2.97972231904882 Q15751 HERC1 Q15751.S440.p_HERC1 Q15751_S440s _1_1_440_440 Q15751 Q15751 Probable E3 ubiquitin-protein ligase HERC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18285.18285.3 9.81 8.2 1.547 3 1 1 0 628.9992 1805.0169 S440s TMT10 435 (R) LGLGDsNNQSTLK (K) LGLGDS(0.99)NNQS(0.0)T(0.0)LK K:TMT10,s:Phosphorylated S HERC1 539122.1 1 1 269.1 394.57 HUMAN 1 -8.067 -15.5474 GRLGSVDSFERSNSL-p O60343-2;S591-p GRLGSVDSFERSNSL 0.791939334471681 0.941377461678668 0.0656666666666667 0.018 1.9543990875502 0.374591917097936 0.0656666666666667 0.018 0.637617298979846 0.917362130869686 0.498679541495451 0.108683885130798 O60343 TBC1D4 O60343.2.S591.p_TBC1D4 O60343-2_S591s _1_1_591_591 O60343-2 O60343|O60343-3|O60343-2 Isoform 2 of TBC1 domain family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18629.18629.3 16.07 10.04 1.703 5 1 1 0 788.7343 2284.2185 S591s TMT10 586 (R) LGSVDsFERSNSLASEK (D) LGS(0.0)VDS(0.99)FERS(0.0)NS(0.0)LAS(0.0)EK K:TMT10,s:Phosphorylated S TBC1D4 141150.8 4 9 603.1 262.97 HUMAN 1 1.9544 0.3746 GRLKRERSMSENAVR-p Q9GZY8-4;S129-p GRLKRERSMSENAVR 0.960338220515773 0.311339107150685 0.0116666666666667 -0.135333333333333 0.339172544669877 6.69728644391033 0.0116666666666667 -0.135333333333333 0.924874372200104 0.213929834706603 0.098773003492693 -1.4075415009823 Q9GZY8 MFF Q9GZY8.4.S129.p_MFF Q9GZY8-4_S129s _1_1_129_129 Q9GZY8-4 Q9GZY8|Q9GZY8-2|Q9GZY8-3|Q9GZY8-5|A0A0A0MS29|Q9GZY8-4 Isoform 4 of Mitochondrial fission factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4964.4964.3 11.93 11.93 3.609 2 1 1 0 496.5681 1407.7212 S129s TMT10 127 (R) ERsMSENAVR (Q) ERS(0.99)MS(0.0)ENAVR s:Phosphorylated S MFF 25066.2 4 7 1266.1 160.29 HUMAN 1 0.3392 -6.6973 GRLLRQASLDGLQQL-p Q3MII6;S506-p GRLLRQASLDGLQQL 0.502031518920472 0.126904943606573 0.104 -0.283666666666667 5.51853587157563 11.8180883042797 0.104 -0.283666666666667 0.280637958770706 0.0657947391672846 1.19829115088291 -2.29898281787122 Q3MII6 TBC1D25 Q3MII6.S506.p_TBC1D25 Q3MII6_S506s _1_1_506_506 Q3MII6 Q3MII6 TBC1 domain family member 25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18146.18146.3 12.46 7.73 2.12 2 1 1 0 733.358 2118.0923 S506s TMT10 504 (R) QAsLDGLQQLRDNMGSR (R) QAS(0.99)LDGLQQLRDNMGS(0.0)R s:Phosphorylated S TBC1D25 76667.4 5 2 3181.1 58.5 HUMAN 1 5.5185 -11.8181 GRLQALRSLSGTPKS-p Q8IX03-2;S523-p GRLQALRSLSGTPKS 0.143862442048254 0.02314576476409 -0.341666666666667 -0.53 17.1905180414114 22.326886152277 -0.341666666666667 -0.53 0.0190962545828033 0.00585209523097614 -3.3002536525674 -4.39234879017303 Q8IX03 WWC1 Q8IX03.2.S523.p_WWC1 Q8IX03-2_S523s _1_1_523_523 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18342.18342.3 13.89 13.89 2.136 3 1 1 0 603.6841 1729.0736 S523s TMT10 518 (R) LQALRsLSGTPK (S) LQALRS(0.99)LS(0.0)GT(0.0)PK K:TMT10,s:Phosphorylated S WWC1 126701.1 3 8 312.1 370.85 HUMAN 1 -17.1905 -22.3269 GRLRSADSENALSVQ-p Q99759;S340-p GRLRSADSENALSVQ 0.865557686443598 0.929261019757498 0.0476666666666667 -0.02 1.21919652648168 0.449998138023731 0.0476666666666667 -0.02 0.755231937645415 0.901571524141935 0.327992481466823 -0.129578208857257 Q99759 MAP3K3 Q99759.S340.p_MAP3K3 Q99759_S340s _1_1_340_340 Q99759 Q99759-2|J3QRB6|J3KRN4 Mitogen-activated protein kinase kinase kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6294.6294.2 12.98 12.98 2.36 3 1 1 0 743.3152 1405.6554 S340s Hydrogen 337 (R) SADsENALSVQER (N) S(0.0)ADS(0.99)ENALS(0.0)VQER s:Phosphorylated S MAP3K3 71295.8 2 6 1082.2 179.91 HUMAN 1 1.2192 -0.45 GRLSRALSLGTIPSL-p Q5SNT2;S454-p GRLSRALSLGTIPSL 0.186966364173873 0.00819640833915464 -0.246333333333333 -0.528333333333333 14.3147815496689 29.6873633404104 -0.246333333333333 -0.528333333333333 0.0370272829672687 0.00107464164357376 -2.75089830392504 -6.32767185341073 Q5SNT2 TMEM201 Q5SNT2.S454.p_TMEM201 Q5SNT2_S454s _1_1_454_454 Q5SNT2 Q5SNT2 Transmembrane protein 201 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27096.27096.2 14.24 7.51 2.247 4 1 1 0 769.4317 1457.8889 S454s TMT10 452 (R) ALsLGTIPSLTR (A) ALS(0.99)LGT(0.0)IPS(0.0)LT(0.0)R s:Phosphorylated S TMEM201 73489.5 3 2 2521.1 80.12 HUMAN 1 -14.3148 -29.6874 GRMDRGNSLPCVLEQ-p Q08495;S333-p GRMDRGNSLPCVLEQ 0.312908588032469 0.0886078805081825 0.177333333333333 0.22 9.44109523127617 13.9301713395827 0.177333333333333 0.22 0.11373404279559 0.0404559930523646 1.88475053588659 2.67850969198269 Q08495 DMTN Q08495.S333.p_DMTN Q08495_S333s _1_1_333_333 Q08495 Q08495|Q08495-4 Dematin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18876.18876.3 12.92 6.92 99 1 1 1 0 729.0351 2105.1248 S333s TMT10 328 (R) MDRGNsLPCVLEQK (I) MDRGNS(1.0)LPCVLEQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DMTN 45627.7 4 7 1283.1 158.63 HUMAN 1 9.4411 13.9302 GRMIRAESGPDLRYE-p P15924;S22-p GRMIRAESGPDLRYE 0.134796267289591 0.250149310733292 0.304333333333333 0.161 17.8511901245726 7.92954337715578 0.304333333333333 0.161 0.0164014025362709 0.161081498944973 3.43221145480981 1.62242636152803 P15924 DSP P15924.S22.p_DSP P15924_S22s _1_1_22_22 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11474.11474.3 19.56 13.17 19.556 6 1 1 0 769.0267 2225.0996 S22s TMT10 20 (R) AEsGPDLRYEVTSGGGGTSR (M) AES(0.99)GPDLRY(0.0)EVT(0.0)S(0.0)GGGGT(0.0)S(0.0)R s:Phosphorylated S DSP 334221.3 19 1 104.1 590.4 HUMAN 1 17.8512 7.9295 GRMLQAISPKQSPSS-p P49585;S315-p GRMLQAISPKQSPSS 0.483726315617236 0.141739706695822 -0.106666666666667 0.279 5.8115094581144 11.1794804119932 -0.106666666666667 0.279 0.262330661384361 0.0762170190277045 -1.25091181616194 2.1865786506114 P49585 PCYT1A P49585.S315.p_PCYT1A P49585_S315s _1_1_315_315 P49585 C9JEJ2|P49585|Q9Y5K3|Q9Y5K3-3|Q9Y5K3-4|Q9Y5K3-2 Choline-phosphate cytidylyltransferase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19026.19026.2 10.13 6.62 99 1 1 1 0 713.4004 1345.8278 S315s TMT10 310 (R) MLQAIsPK (Q) MLQAIS(1.0)PK K:TMT10,s:Phosphorylated S PCYT1A 42072.6 10 5 694.1 242.25 HUMAN 1 -5.8115 11.1795 GRMYPPRSPKSAAPA-p Q8WWM7-3;S449-p GRMYPPRSPKSAAPA 0.0770100275746385 0.0279985558556058 -0.39 -0.373666666666667 23.8398971907364 21.0442499216053 -0.39 -0.373666666666667 0.00413057280058709 0.00786275978665894 -4.75583246708479 -4.10263099506514 Q8WWM7 ATXN2L Q8WWM7.3.S449.p_ATXN2L Q8WWM7-3_S449s _1_1_449_449 Q8WWM7-3 Q8WWM7-3|H3BUF6|Q8WWM7-2|Q8WWM7-9|Q8WWM7-4|Q8WWM7-5|Q8WWM7-8|Q8WWM7-6 Isoform 3 of Ataxin-2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9300.9713.2 11.42 11.42 11.417 2 1 1 0 757.4038 1433.8339 S449s TMT10 444 (R) MYPPRsPK (S) MY(0.0)PPRS(0.99)PK K:TMT10,s:Phosphorylated S ATXN2L 116093.7 6 15 184.1 476.17 HUMAN 1 -23.8399 -21.0442 GRNARRFSAGQWEAR-p Q9Y4W2;S441-p GRNARRFSAGQWEAR 0.535204694146268 0.227892144433066 -0.135666666666667 -0.239666666666667 5.02545763499134 8.46105155954417 -0.135666666666667 -0.239666666666667 0.314379512743328 0.14252624522619 -1.10872132258551 -1.71448531761911 Q9Y4W2 LAS1L Q9Y4W2.S441.p_LAS1L Q9Y4W2_S441s _1_1_441_441 Q9Y4W2 Q9Y4W2|Q9Y4W2-2|Q9Y4W2-3 Ribosomal biogenesis protein LAS1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12854.12854.3 9.7 8.74 99 1 1 1 0 506.2469 1436.7596 S441s TMT10 439 (R) RFsAGQWEAR (R) RFS(1.0)AGQWEAR s:Phosphorylated S LAS1L 84033.3 1 2 1725.1 119.4 HUMAN 1 -5.0255 -8.4611 GRNHVDESPVEFPAT-p Q9UBC3;S136-p GRNHVDESPVEFPAT 0.276622177536734 0.537258917301098 0.176666666666667 -0.163333333333333 10.5541182942071 3.63041454567784 0.176666666666667 -0.163333333333333 0.0880213794783373 0.433469500591634 2.07816606633744 -0.845655343239595 Q9UBC3 DNMT3B Q9UBC3.S136.p_DNMT3B Q9UBC3_S136s _1_1_136_136 Q9UBC3 Q9UBC3|Q9UBC3-6|Q9UBC3-2 DNA (cytosine-5)-methyltransferase 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11795.11795.3 14.08 14.08 14.078 2 1 1 0 636.3014 1826.9234 S136s TMT10 131 (R) NHVDEsPVEFPATR (S) NHVDES(0.99)PVEFPAT(0.0)R s:Phosphorylated S DNMT3B 97175.7 1 3 4070.1 38.17 HUMAN 1 10.5541 -3.6304 GRNIIHGSDSVKSAE-p Q32Q12;S260-p GRNIIHGSDSVKSAE 0.911438071310171 0.857010767487095 0.0276666666666667 -0.0266666666666666 0.789955464290129 0.945258428829566 0.0276666666666667 -0.0266666666666667 0.833689733835727 0.804403880723457 0.220328040581109 -0.260064716764498 Q32Q12 NotFound Q32Q12.S260.p_NotFound Q32Q12_S260s _1_1_260_260 Q32Q12 Q32Q12|P22392-2|O60361 Nucleoside diphosphate kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10094.10094.3 14.86 14.86 2.46 2 1 1 0 536.6233 1527.8895 S260s TMT10 255 (R) NIIHGsDSVK (S) NIIHGS(0.99)DS(0.0)VK K:TMT10,s:Phosphorylated S NME1-NME2 32926.7 2 7 2569.1 78.26 HUMAN 1 0.79 -0.9453 GRNTPYKTLEPVKPP-p Q8IZP0-9;T200-p GRNTPYKTLEPVKPP 0.207292801328694 0.0665963981085487 0.221666666666667 0.353333333333333 13.2082440216602 15.6473143875985 0.221666666666667 0.353333333333333 0.0477722391608795 0.027243855067087 2.54865997633545 2.99869889717409 Q8IZP0 ABI1 Q8IZP0.9.T200.p_ABI1 Q8IZP0-9_T200t _1_1_200_200 Q8IZP0-9 Q8IZP0-2|Q8IZP0-7|Q8IZP0-8|B6VEX4|Q8IZP0-10|Q8IZP0-11|Q8IZP0-9|Q8IZP0-6|Q8IZP0-5|A0A0A0MRT6|Q8IZP0-3|Q8IZP0-4 Isoform 9 of Abl interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20184.20184.4 13.77 13.77 1.69 7 1 1 0 896.7299 3503.9175 T200t TMT10 195 (R) NTPYKtLEPVKPPTVPNDYMTSPAR (L) NT(0.0)PY(0.0)KT(0.99)LEPVKPPT(0.0)VPNDY(0.0)MT(0.0)S(0.0)PAR K:TMT10,t:Phosphorylated T ABI1 52580.9 1 3 1517.1 134.48 HUMAN 1 13.2082 15.6473 GRPEGEGTPGLTAKK-p Q96ED9;T230-p GRPEGEGTPGLTAKK 0.797394575947984 0.214318096127196 -0.0366666666666667 -0.123333333333333 1.89795300582076 8.80296359496896 -0.0366666666666667 -0.123333333333333 0.645958622027104 0.131735747629892 -0.486082500345581 -1.7736327905597 Q96ED9 HOOK2 Q96ED9.T230.p_HOOK2 Q96ED9_T230t _1_1_230_230 Q96ED9 Q96ED9|Q96ED9-2 Protein Hook homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10936.10943.3 14.88 7.79 5.546 2 1 1 0 680.3522 1959.0734 T230t TMT10 222 (R) MGRPEGEGtPGLTAK (K) MGRPEGEGT(0.99)PGLT(0.0)AK K:TMT10,t:Phosphorylated T HOOK2 83775.7 3 1 4789.1 26.61 HUMAN 1 -1.898 -8.803 GRPEGQYSEDEDTDT-p Q9NPQ8-3;S442-p GRPEGQYSEDEDTDT 0.158291830300056 0.00359402805935534 -0.232333333333333 -0.599333333333333 16.0614356960332 36.4046280318084 -0.232333333333333 -0.599333333333333 0.0247660320376252 0.000228842770436292 -3.07999547946245 -8.625970596765 Q9NPQ8 RIC8A Q9NPQ8.3.S442.p_RIC8A Q9NPQ8-3_S442s _1_1_442_442 Q9NPQ8-3 Q9NPQ8-3|Q9NPQ8-4|Q9NPQ8-2 Isoform 3 of Synembryn-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14165.14165.5 20.64 20.64 4.053 5 1 1 0 752.5535 3678.7684 S442s TMT10 430 (R) GLMAGGRPEGQYsEDEDTDTDEYKEAK (A) GLMAGGRPEGQY(0.0)S(0.99)EDEDT(0.0)DT(0.0)DEY(0.0)KEAK K:TMT10,s:Phosphorylated S RIC8A 60884.7 7 1 3369.1 52.69 HUMAN 1 -16.0614 -36.4046 GRPEQLGSPLHSSYL-p Q8N2G6;S65-p GRPEQLGSPLHSSYL 0.318060606847238 0.322006369513866 0.144333333333333 -0.197666666666667 9.31729521526419 6.5054502399189 0.144333333333333 -0.197666666666667 0.11702279817507 0.223591338604971 1.86330327684417 -1.37378270733753 Q8N2G6 ZCCHC24 Q8N2G6.S65.p_ZCCHC24 Q8N2G6_S65s _1_1_65_65 Q8N2G6 Q8N2G6 Zinc finger CCHC domain-containing protein 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25464.25464.4 19.68 19.68 2.992 5 1 1 0 743.3773 2890.5161 S65s TMT10 58 (K) GRPEQLGsPLHSSYLNSFFQLQR (G) GRPEQLGS(0.99)PLHS(0.0)S(0.0)Y(0.0)LNS(0.0)FFQLQR s:Phosphorylated S ZCCHC24 27581.7 1 1 5401.1 19.68 HUMAN 1 9.3173 -6.5055 GRPGEQPSPCQEGSQ-p I3L2J0;S442-p GRPGEQPSPCQEGSQ 0.701043821371557 0.404527018314379 -0.0603333333333333 0.100666666666667 2.90124705392137 5.23026716039051 -0.0603333333333334 0.100666666666667 0.512714139664884 0.299897802832093 -0.700282083137931 1.14585251535841 I3L2J0 NotFound I3L2J0.S442.p_NotFound I3L2J0_S442s _1_1_442_442 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10264.10264.4 20.52 20.52 6.132 4 1 1 0 734.5895 2855.3692 S442s TMT10 428 (K) SPAFVGPGRPGEQPsPCQEGSQGGSR (S) S(0.0)PAFVGPGRPGEQPS(0.99)PCQEGS(0.0)QGGS(0.0)R C:Carbamidomethylation,s:Phosphorylated S CIC 259056.7 4 4 23.1 999.57 HUMAN 1 -2.9012 5.2303 GRPGERGSGGLFSPS-p Q9C0C2;S1024-p GRPGERGSGGLFSPS 0.350553974320356 0.0261702953704286 -0.16 -0.300333333333333 8.45597306369978 21.5099582809174 -0.16 -0.300333333333333 0.142693008181796 0.00706324339304716 -1.71418266198141 -4.20643886394768 Q9C0C2 TNKS1BP1 Q9C0C2.S1024.p_TNKS1BP1 Q9C0C2_S1024s _1_1_1024_1024 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13469.13469.5 18.75 18.75 4.688 4 1 1 0 632.5124 3078.5667 S1024s TMT10 1015 (R) DAGRPGERGsGGLFSPSTAHVPDGALGQR (D) DAGRPGERGS(0.99)GGLFS(0.0)PS(0.0)T(0.0)AHVPDGALGQR s:Phosphorylated S TNKS1BP1 182819.3 23 43 4.1 2105.7 HUMAN 1 -8.456 -21.51 GRPPAPSSEEEDGEA-p Q96KN1;S300-p GRPPAPSSEEEDGEA 0.665544717655066 0.374802217577547 0.067 0.0863333333333334 3.30497591889856 5.65735835921204 0.067 0.0863333333333333 0.467199541729401 0.271809207353878 0.781703946683289 1.22299979139183 Q96KN1 FAM84B Q96KN1.S300.p_FAM84B Q96KN1_S299sS300s_2_2_299_300 Q96KN1 Q96KN1 Protein FAM84B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11055.11055.3 10.96 10.96 4.128 4 2 2 0 906.3937 2557.2368 S299s S300s TMT10 288 (R) TTPPPGRPPAPssEEEDGEAVAH (-) T(0.0)T(0.0)PPPGRPPAPS(0.99)S(0.99)EEEDGEAVAH s:Phosphorylated S FAM84B 34701.9 9 7 1802.1 114.13 HUMAN 1 3.305 5.6574 GRPPYAASAEEVAKE-p Q9NZB2-6;S1051-p GRPPYAASAEEVAKE 0.532388852752496 0.226378535570552 -0.086 -0.137666666666667 5.06637422776671 8.49652903501748 -0.086 -0.137666666666667 0.311431528461826 0.141366692303156 -1.1162077445884 -1.72062410079679 Q9NZB2 FAM120A Q9NZB2.6.S1051.p_FAM120A Q9NZB2-6_S1051s _1_1_1051_1051 Q9NZB2-6 Q9NZB2-6|Q9NZB2-4 Isoform F of Constitutive coactivator of PPAR-gamma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13189.13189.3 17.66 17.66 17.657 2 1 1 0 870.4558 2529.3826 S1051s TMT10 1038 (K) NQAAIQGRPPYAAsAEEVAK (E) NQAAIQGRPPY(0.0)AAS(0.99)AEEVAK K:TMT10,s:Phosphorylated S FAM120A 126524.7 3 12 839.1 214.86 HUMAN 1 -5.0664 -8.4965 GRPRRSRSHSDNDRF-p O75494;S158-p GRPRRSRSHSDNDRF 0.124660294746138 0.0132378159927316 0.279 0.533666666666667 18.8106634275659 26.1369364583278 0.279 0.533666666666667 0.0131502393399919 0.00243392030695776 3.62822681918339 5.3305609047026 O75494 SRSF10 O75494.S158.p_SRSF10 O75494_S158s _1_1_158_158 O75494 O75494|O75494-2 Serine/arginine-rich splicing factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.3534.3534.3 11.73 11.73 11.726 2 1 1 0 472.2157 1334.665 S158s Hydrogen 158 (R) sHSDNDRFK (H) S(0.99)HS(0.0)DNDRFK K:TMT10-Lys-Only,s:Phosphorylated S SRSF10 31357 15 1 867.1 210.03 HUMAN 1 18.8107 26.1369 GRPRRSRSHSDNDRP-p O75494-3;S158-p GRPRRSRSHSDNDRP 0.283283360364086 0.0220380740482969 0.160666666666667 0.312 10.3505027794217 22.6392186618756 0.160666666666667 0.312 0.092246462794381 0.00544600622992163 2.04267602930491 4.4647539605437 O75494 SRSF10 O75494.3.S158.p_SRSF10 O75494-3_S158s _1_1_158_158 O75494-3 O75494-3|O75494-6 Isoform 3 of Serine/arginine-rich splicing factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10027.10027.3 24.16 24.16 1.424 11 1 1 0 992.7262 2896.1976 S158s Hydrogen 158 (R) sHSDNDRPNCSWNTQYSSAYYTSR (K) S(0.99)HS(0.0)DNDRPNCS(0.0)WNT(0.0)QY(0.0)S(0.0)S(0.0)AY(0.0)Y(0.0)T(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S SRSF10 22336.2 13 16 867.2 210.03 HUMAN 1 10.3505 22.6392 GRPSKPPSPKQNVRK-p Q9P2M4;S295-p GRPSKPPSPKQNVRK 0.799321908925685 0.0751488374650197 0.038 0.205 1.87299248377806 14.9184973104932 0.038 0.205 0.649681876125392 0.03222183496617 0.480487918671707 2.86132450584511 Q9P2M4 TBC1D14 Q9P2M4.S295.p_TBC1D14 Q9P2M4_S295s _1_1_295_295 Q9P2M4 Q9P2M4|B9A071|Q9P2M4-2 TBC1 domain family member 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5375.5375.4 7.41 7.41 7.41 2 1 1 0 473.0302 1809.1314 S295s TMT10 287 (K) AGRPSKPPsPK (Q) AGRPS(0.0)KPPS(0.99)PK K:TMT10,s:Phosphorylated S TBC1D14 78877.4 8 3 4308.1 33.92 HUMAN 1 1.873 14.9185 GRPSKTPSPSQPKKN-p Q9NTI5;S1383-p GRPSKTPSPSQPKKN 0.221373736351063 0.0810545452547272 0.210333333333333 -0.398 12.6116319457229 14.4698035174073 0.210333333333333 -0.398 0.0548070977924738 0.0357289002179895 2.44131488651953 -2.7778565454985 Q9NTI5 PDS5B Q9NTI5.S1383.p_PDS5B Q9NTI5_S1383s _1_1_1383_1383 Q9NTI5 Q9NTI5|Q9NTI5-2 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5187.5187.5 8.87 5.75 1.545 4 1 1 0 499.097 2411.4904 S1383s TMT10 1376 (R) GRPSKTPsPSQPKK (N) GRPS(0.0)KT(0.0)PS(0.99)PS(0.0)QPKK K:TMT10,s:Phosphorylated S PDS5B 165919.5 17 17 100.1 597.99 HUMAN 1 12.6116 -14.4698 GRQKDKGSIDDLPTV-p Q14146;S1414-p GRQKDKGSIDDLPTV 0.235118035263392 0.0324004966980659 -0.263333333333333 -0.304666666666667 12.0455089745338 20.0972623402092 -0.263333333333333 -0.304666666666667 0.0624380171310332 0.0097785343565847 -2.34040919698507 -3.89618659596994 Q14146 URB2 Q14146.S1414.p_URB2 Q14146_S1414s _1_1_1414_1414 Q14146 Q14146 Unhealthy ribosome biogenesis protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22690.22690.3 12.37 7.13 4.324 2 1 1 0 723.4094 2088.2519 S1414s TMT10 1411 (K) DKGsIDDLPTVLK (C) DKGS(0.99)IDDLPT(0.0)VLK K:TMT10,s:Phosphorylated S URB2 172480.8 1 1 6327.1 12.37 HUMAN 1 -12.0455 -20.0973 GRQLRRGSLGGALTG-p O15021;S166-p GRQLRRGSLGGALTG 0.932098009206702 0.255009715361133 -0.015 0.147666666666667 0.605377874967035 7.81806687315166 -0.015 0.147666666666667 0.869885741947733 0.165269728133461 -0.171734975175807 1.60308741648411 O15021 MAST4 O15021.S166.p_MAST4 O15021_S166s _1_1_166_166 O15021 O15021|J3QT34|O15021-4|E7EX28 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9166.9166.3 9.33 9.33 9.33 2 1 1 0 451.9115 1273.7538 S166s TMT10 164 (R) RGsLGGALTGR (Y) RGS(0.99)LGGALT(0.0)GR s:Phosphorylated S MAST4 286597.7 1 3 121.99 549.41 HUMAN 1 -0.6054 7.8181 GRRAEDGSVIDYELI-p P07355;S184-p GRRAEDGSVIDYELI 0.310067779574509 0.473853416672925 -0.156666666666667 -0.0679999999999999 9.50713494575403 4.32345269805221 -0.156666666666667 -0.0679999999999999 0.112017662377908 0.36953427837338 -1.89619483925739 -0.978298932486835 P07355 ANXA2 P07355.S184.p_ANXA2 P07355_S184s _1_1_184_184 P07355 P07355-2|H0YMU9 Annexin A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30646.30646.4 23.38 23.38 6.518 3 1 1 0 827.9056 3228.6312 S184s TMT10 180 (R) AEDGsVIDYELIDQDARDLYDAGVK (R) AEDGS(0.99)VIDY(0.0)ELIDQDARDLY(0.0)DAGVK K:TMT10,s:Phosphorylated S ANXA2 38831.6 7 14 537.1 277.57 HUMAN 1 -9.5071 -4.3235 GRRALFDSYTNLERV-p Q9NYB9-2;S22-p GRRALFDSYTNLERV 0.456854636111495 0.126560091121748 0.131 -0.161666666666667 6.26925251797244 11.8337422902652 0.131 -0.161666666666667 0.236088453972564 0.0655580113276624 1.33239026687949 -2.30174958970912 Q9NYB9 ABI2 Q9NYB9.2.S22.p_ABI2 Q9NYB9-2_S22s _1_1_22_22 Q9NYB9-2 Q9NYB9|F8WAL6|Q9NYB9-4|A0A0C4DG21|E7EW77|Q9NYB9-2|E9PEZ7|F8WEB9|F8WBL5|F8WAZ8|F8WCD7|F8WAU3|E7EUA1 Isoform 2 of Abl interactor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22394.22394.2 13.12 7.73 1.128 3 1 1 0 819.3922 1557.811 S22s TMT10 18 (R) ALFDsYTNLER (V) ALFDS(0.99)Y(0.0)T(0.0)NLER s:Phosphorylated S ABI2 52501.9 1 1 1041.1 185.01 HUMAN 1 6.2693 -11.8337 GRREDDRSWQGTADG-p Q15424;S832-p GRREDDRSWQGTADG 0.33877107152676 0.00534084809647889 0.158333333333333 0.539333333333333 8.74533618524869 32.9997892518898 0.158333333333333 0.539333333333333 0.13349542474028 0.00050121155510258 1.76428027857385 7.38607257761653 Q15424 SAFB Q15424.S832.p_SAFB Q15424_S832s _1_1_832_832 Q15424 Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9399.9399.4 12.61 12.61 1.248 2 1 1 0 712.0673 2765.2772 S832s TMT10 828 (R) EDDRsWQGTADGGMMDRDHK (R) EDDRS(0.99)WQGT(0.0)ADGGMMDRDHK K:TMT10,s:Phosphorylated S SAFB 103096.3 1 41 83.1 629.62 HUMAN 1 8.7453 32.9998 GRREVRFSDEPPEVY-p Q5JTV8;S60-p GRREVRFSDEPPEVY 0.614579930070629 0.493282492051463 0.0693333333333333 0.068 3.92511203009637 4.10237091905456 0.0693333333333333 0.068 0.405031496856634 0.388832813764483 0.902787391839276 0.936486383640054 Q5JTV8 TOR1AIP1 Q5JTV8.S60.p_TOR1AIP1 Q5JTV8_S60s _1_1_60_60 Q5JTV8 J3KN66|Q5JTV8-3|Q5JTV8-2 Torsin-1A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28366.28366.3 18.02 18.02 5.154 2 1 1 0 987.8303 2881.5024 S60s TMT10 56 (R) EVRFsDEPPEVYGDFEPLVAK (E) EVRFS(0.99)DEPPEVY(0.0)GDFEPLVAK K:TMT10,s:Phosphorylated S TOR1AIP1 66418.4 2 4 585.1 265.22 HUMAN 1 3.9251 4.1024 GRRGRAGSHGRRSPG-p O95049-3;S178-p GRRGRAGSHGRRSPG 0.526345139054758 0.103251263587157 -0.101666666666667 -0.205333333333333 5.15755284253776 13.0264448630182 -0.101666666666667 -0.205333333333333 0.304961289788551 0.0498144699640398 -1.13285365255794 -2.51445030078769 O95049 TJP3 O95049.3.S178.p_TJP3 O95049-3_S178sS183sS188s_3_3_178_188 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21342.21342.4 10.05 5.27 5.514 4 3 3 0 767.6126 2827.5327 S178s S183s S188s TMT10 176 (R) AGsHGRRsPGGGsEANGLALVSGFK (R) AGS(0.99)HGRRS(0.99)PGGGS(0.99)EANGLALVS(0.0)GFK K:TMT10,s:Phosphorylated S TJP3 103593.6 2 31 125.1 544.41 HUMAN 1 -5.1576 -13.0264 GRRKGKASIKDPHFL-p Q4KWH8;S1012-p GRRKGKASIKDPHFL 0.265496929072473 0.0275368394115547 -0.184333333333333 -0.421666666666667 10.9180810792587 21.1578516431451 -0.184333333333333 -0.421666666666667 0.0809453475436499 0.00765975423974495 -2.14176391321466 -4.12781115175794 Q4KWH8 PLCH1 Q4KWH8.S1012.p_PLCH1 Q4KWH8_S1012s _1_1_1012_1012 Q4KWH8 Q4KWH8|Q4KWH8-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18068.18068.4 11.81 11.81 99 1 1 1 0 678.8914 2632.5745 S1012s TMT10 1009 (K) GKAsIKDPHFLNFNK (K) GKAS(1.0)IKDPHFLNFNK K:TMT10,s:Phosphorylated S PLCH1 191330.6 1 8 201.1 451.38 HUMAN 1 -10.9181 -21.1579 GRRKIILSDEGKMYG-p Q99594;S61-p GRRKIILSDEGKMYG 0.263992811521435 0.0677472191036849 -0.233666666666667 -0.312666666666667 10.9700688494046 15.555270718079 -0.233666666666667 -0.312666666666667 0.0799821575206104 0.0278274190583616 -2.15086647198034 -2.9812215703837 Q99594 TEAD3 Q99594.S61.p_TEAD3 Q99594_S61s _1_1_61_61 Q99594 Q15562|Q99594|A0A1X7SBS4|Q15561|P28347|H0YE88 Transcriptional enhancer factor TEF-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18736.18736.2 10.09 5.79 99 1 1 1 0 706.8947 1332.8139 S61s TMT10 58 (K) IILsDEGK (M) IILS(1.0)DEGK K:TMT10,s:Phosphorylated S TEAD3 48846.7 1 7 3010.1 63.35 HUMAN 1 -10.9701 -15.5553 GRRNTAPSPGPSVIR-p Q9H7P9;S469-p GRRNTAPSPGPSVIR 0.326712709573282 0.471856671797434 0.158666666666667 -0.0936666666666666 9.09208171145312 4.34758972158492 0.158666666666667 -0.0936666666666666 0.123251390853502 0.367486194016279 1.82430398306116 -0.982838175545792 Q9H7P9 PLEKHG2 Q9H7P9.S469.p_PLEKHG2 Q9H7P9_S469s _1_1_469_469 Q9H7P9 Q9H7P9|E7ESZ3|Q9H7P9-2 Pleckstrin homology domain-containing family G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10540.10540.2 7.84 7.84 1.833 3 1 1 0 752.8908 1424.8059 S469s TMT10 465 (R) NTAPsPGPSVIR (R) NT(0.0)APS(0.99)PGPS(0.0)VIR s:Phosphorylated S PLEKHG2 149335.7 1 6 886.1 206.23 HUMAN 1 9.0921 -4.3476 GRRRRRDSLDSSTEA-p Q9Y2I9;S114-p GRRRRRDSLDSSTEA 0.537878468192196 0.721507523810529 -0.0893333333333333 -0.035 4.9797035907063 1.95422116512681 -0.0893333333333333 -0.035 0.317709090212559 0.637643421517349 -1.10033735385671 -0.498582548233876 Q9Y2I9 TBC1D30 Q9Y2I9.S114.p_TBC1D30 Q9Y2I9_S114s _1_1_114_114 Q9Y2I9 Q9Y2I9 TBC1 domain family member 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8322.8322.3 17.85 17.85 1.672 6 1 1 0 748.6817 2164.0589 S114s Hydrogen 111 (R) RRDsLDSSTEASGSDVVLGGR (S) RRDS(0.99)LDS(0.0)S(0.0)T(0.0)EAS(0.0)GS(0.0)DVVLGGR s:Phosphorylated S TBC1D30 103654.4 4 6 283.1 386.67 HUMAN 1 -4.9797 -1.9542 GRRRRSPSPPPTRRR-p A9Z1X7;S560-p GRRRRSPSPPPTRRR 0.373737854391693 0.0346823803746467 0.136 0.270666666666667 7.91704108183062 19.6631896729152 0.136 0.270666666666667 0.16154588200521 0.010806399844562 1.62076608635099 3.80355431034942 A9Z1X7 NotFound A9Z1X7.S560.p_NotFound A9Z1X7_S558sS560s_2_2_558_560 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.1949.2338.3 12.15 12.15 5.137 3 2 2 0 489.5643 1306.7451 S558s S560s Hydrogen 556 (R) RRsPsPPPTRR (R) RRS(0.99)PS(0.99)PPPT(0.0)RR s:Phosphorylated S SRRM1 103445.7 49 60 8.1 1346.57 HUMAN 1 7.917 19.6632 GRRSRSASPSTQQEK-p P55198;S222-p GRRSRSASPSTQQEK 0.126867028860092 0.00447115521927803 0.346666666666667 0.591 18.5957754032656 34.5019305414721 0.346666666666667 0.591 0.0138172768579424 0.00035465570135852 3.58385842821398 7.91264526381356 P55198 MLLT6 P55198.S222.p_MLLT6 P55198_S222s _1_1_222_222 P55198 P55198|A0A087WW39|Q6P2C6 Protein AF-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5256.5256.2 14.17 9.65 2.544 4 1 1 0 800.9032 1520.8321 S222s TMT10 220 (R) SAsPSTQQEK (H) S(0.0)AS(0.99)PS(0.0)T(0.0)QQEK K:TMT10,s:Phosphorylated S MLLT6 113557.5 3 2 1008.1 189 HUMAN 1 18.5958 34.5019 GRRSRTKSDLSLKMY-p Q9ULQ1-3;S838-p GRRSRTKSDLSLKMY 0.171396449036957 0.00531589890047624 -0.321 -0.562 15.259083640932 33.0303687824607 -0.321 -0.562 0.0297914496113369 0.000497694821279653 -2.92718524896248 -7.3964868134011 Q9ULQ1 TPCN1 Q9ULQ1.3.S838.p_TPCN1 Q9ULQ1-3_S838s _1_1_838_838 Q9ULQ1-3 Q9ULQ1-3|B7Z3R2 Isoform 3 of Two pore calcium channel protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14017.14017.3 9.33 9.33 9.334 3 1 1 0 553.6621 1579.0034 S838s TMT10 836 (R) TKsDLSLK (M) T(0.0)KS(0.99)DLS(0.0)LK K:TMT10,s:Phosphorylated S TPCN1 102364.8 1 1 6813.1 9.33 HUMAN 1 -15.2591 -33.0304 GRRTRSPSPTLGESL-p Q86UU1;S520-p GRRTRSPSPTLGESL 0.86379989785485 0.258128538771308 0.0253333333333333 0.115 1.23918898051673 7.74912911398994 0.0253333333333333 0.115 0.7517632682937 0.167914070062604 0.332845219494076 1.59112096751747 Q86UU1 PHLDB1 Q86UU1.S520.p_PHLDB1 Q86UU1_S518sS520s_2_2_518_520 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15927.15927.3 15.42 12.1 2.165 4 2 2 0 603.9513 1649.906 S518s S520s Hydrogen 518 (R) sPsPTLGESLAPHK (G) S(0.99)PS(0.99)PT(0.0)LGES(0.0)LAPHK K:TMT10-Lys-Only,s:Phosphorylated S PHLDB1 152129.1 11 27 99.1 600.41 HUMAN 1 1.2392 7.7491 GRRTSVPSPEQPQPY-p Q8TEH3;S523-p GRRTSVPSPEQPQPY 0.125743941781331 0.243144743021947 0.343333333333333 0.158666666666667 18.7097450618447 8.08988834783772 0.343333333333333 0.158666666666667 0.0134593936063812 0.155242692057211 3.60735559547917 1.65022107011718 Q8TEH3 DENND1A Q8TEH3.S523.p_DENND1A Q8TEH3_S523s _1_1_523_523 Q8TEH3 Q8TEH3 DENN domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10629.10629.3 13.38 13.38 4.328 4 1 1 0 598.9604 1714.8962 S523s TMT10 519 (R) TSVPsPEQPQPYR (T) T(0.0)S(0.0)VPS(0.99)PEQPQPY(0.0)R s:Phosphorylated S DENND1A 111202.8 4 3 882.1 207.04 HUMAN 1 18.7097 8.0899 GRRVKSPSPKSERSE-p O15042;S948-p GRRVKSPSPKSERSE 0.0511487796737011 0.242704318224576 0.540666666666667 0.125666666666667 28.3481397841806 8.10172702260612 0.540666666666667 0.125666666666667 0.00146280360371827 0.154820083638366 5.94486593857371 1.6522723135451 O15042 U2SURP O15042.S948.p_U2SURP O15042_S948s _1_1_948_948 O15042 O15042|O15042-2 U2 snRNP-associated SURP motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7259.7259.2 8.49 1.66 1.189 2 1 1 0 755.454 1429.9346 S948s TMT10 944 (R) VKSPsPK (S) VKS(0.0)PS(0.99)PK K:TMT10,s:Phosphorylated S U2SURP 118746.2 1 15 360.1 345.29 HUMAN 1 28.3481 8.1017 GRSAESMSDGVGSFL-p Q9UQC2;S427-p GRSAESMSDGVGSFL 0.0412311366109555 0.0106932352965192 -0.514333333333333 -0.413333333333333 30.8836297955528 27.6369033652991 -0.514333333333333 -0.413333333333333 0.000815900164037406 0.00172309675070129 -6.70554040019456 -5.73598309485023 Q9UQC2 GAB2 Q9UQC2.S427.p_GAB2 Q9UQC2_S427s _1_1_427_427 Q9UQC2 Q9UQC2|Q9UQC2-2 GRB2-associated-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24844.24844.3 14.66 11.2 2.13 4 1 1 0 703.0092 2027.052 S427s TMT10 422 (R) SAESMsDGVGSFLPGK (M) S(0.0)AES(0.0)MS(0.99)DGVGS(0.0)FLPGK K:TMT10,s:Phosphorylated S GAB2 74969.7 1 11 698.1 241.06 HUMAN 1 -30.8836 -27.6369 GRSECDSSPEPKALP-p Q9UQ35;S1483-p GRSECDSSPEPKALP 0.430184643956734 0.0713780522378276 0.141833333333333 0.292333333333333 6.7470128577724 15.2410044984166 0.141833333333333 0.292333333333333 0.211494322917311 0.0299157262286222 1.41665235402116 2.92183086399517 Q9UQ35 SRRM2 Q9UQ35.S1483.p_SRRM2 Q9UQ35_S1482sS1483s_2_2_1482_1483 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5090.5090.2 11.61 11.61 3.016 3 2 2 0 762.7796 1364.6201 S1482s S1483s Hydrogen 1478 (R) SECDssPEPK (A) S(0.0)ECDS(0.99)S(0.99)PEPK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 13 211 2.1 3310.34 HUMAN 2 6.747 15.241 GRSEEKISDSEGFKA-p P23246;S273-p GRSEEKISDSEGFKA 0.990219796343462 0.382374442579993 0.003 0.130333333333333 0.0876857502925569 5.54687950908314 0.00299999999999997 0.130333333333333 0.980012070899328 0.278812377062885 0.0262326025431062 1.20313361714023 P23246 SFPQ P23246.S273.p_SFPQ P23246_S273s _1_1_273_273 P23246 P23246|P23246-2 Splicing factor, proline- and glutamine-rich HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12674.12674.2 13.58 13.58 1.715 3 1 1 0 1062.0475 2043.1213 S273s TMT10 268 (R) SEEKIsDSEGFK (A) S(0.0)EEKIS(0.99)DS(0.0)EGFK K:TMT10,s:Phosphorylated S SFPQ 76262.2 5 3 1659.1 123.09 HUMAN 1 0.0877 5.5469 GRSILLGSGDSEVTE-p Q8N680;S488-p GRSILLGSGDSEVTE 0.825157658635187 0.0192035253059585 -0.0333333333333333 0.322666666666667 1.60802107718378 23.5944681198402 -0.0333333333333333 0.322666666666667 0.690554392812339 0.00437072203996367 -0.420132684758064 4.69095170640548 Q8N680 ZBTB2 Q8N680.S488.p_ZBTB2 Q8N680_S488sS491s_2_2_488_491 Q8N680 Q8N680 Zinc finger and BTB domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26589.26589.4 13.08 13.08 1.157 5 2 2 0 835.6935 3179.8131 S488s S491s TMT10 483 (R) SILLGsGDsEVTEPDHPVLASIKK (E) S(0.0)ILLGS(0.99)GDS(0.99)EVT(0.0)EPDHPVLAS(0.0)IKK K:TMT10,s:Phosphorylated S ZBTB2 58248.7 1 5 2616.1 76.7 HUMAN 1 -1.608 23.5945 GRSIRGLSLPPACTR-p P12532-2;S205-p GRSIRGLSLPPACTR 0.907362848442901 0.301368477994011 0.017 -0.104 0.82822684102761 6.87615723925719 0.017 -0.104 0.826375277291519 0.205297790847891 0.230217987258698 -1.4389267880158 P12532 CKMT1B P12532.2.S205.p_CKMT1B P12532-2_S205s _1_1_205_205 P12532-2 P12532-2|P17540 Isoform 2 of Creatine kinase U-type, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15772.15772.2 8.89 8.89 1.375 2 1 1 0 690.8489 1300.7245 S205s TMT10 203 (R) GLsLPPACTR (A) GLS(0.99)LPPACT(0.0)R C:Carbamidomethylation,s:Phosphorylated S CKMT1A 50933.3 1 2 1688.1 120.83 HUMAN 1 0.8282 -6.8762 GRSLANGTPPMGAAS-p A0A1B0GV68;T713-p GRSLANGTPPMGAAS 0.265419473261086 0.0263581786161247 0.163 0.291666666666667 10.9240236003258 21.4563116648524 0.163 0.291666666666667 0.0808346644680337 0.00715103384507333 2.1428041467962 4.19440186956686 A0A1B0GV68 NotFound A0A1B0GV68.T713.p_NotFound A0A1B0GV68_T713t_1_1_713_713 A0A1B0GV68 A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19840.19840.4 19.42 19.7 4.626 4 1 1 0 727.8788 2827.5323 N711n T713t TMT10 708 (R) SLAnGtPPMGAASKVPAVQSVCAR (G) S(0.0)LAN(1.0)GT(0.99)PPMGAAS(0.0)KVPAVQS(0.0)VCAR K:TMT10,C:Carbamidomethylation,n:Deamidated,t:Phosphorylated T FARP1 88555.5 19 20 147.1 514.5 HUMAN 1 10.924 21.4563 GRSPDEVTLTSIVPT-p Q9UKS6;T324-p GRSPDEVTLTSIVPT 0.940973307123652 0.347074636656491 0.0113333333333333 -0.145666666666667 0.519718720690709 6.09251209120679 0.0113333333333333 -0.145666666666667 0.887213472291729 0.245894486430567 0.148648711831017 -1.30071320643009 Q9UKS6 PACSIN3 Q9UKS6.T324.p_PACSIN3 Q9UKS6_T324t _1_1_324_324 Q9UKS6 Q9UKS6 Protein kinase C and casein kinase substrate in neurons protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23377.23377.3 13.18 13.18 2.599 5 1 1 0 608.6506 1743.969 T324t TMT10 319 (R) SPDEVtLTSIVPTR (D) S(0.0)PDEVT(0.99)LT(0.0)S(0.0)IVPT(0.0)R t:Phosphorylated T PACSIN3 48828.3 2 6 547.1 275.62 HUMAN 1 0.5197 -6.0925 GRSPTGNTPPVIDSV-p P25054;T2679-p GRSPTGNTPPVIDSV 0.761729314861302 0.173873394108617 0.0503333333333333 -0.163333333333333 2.26358729858024 9.99097850207732 0.0503333333333333 -0.163333333333333 0.593801472395624 0.10020794356972 0.566415206875179 -1.97934353599226 P25054 APC P25054.T2679.p_APC P25054_T2679t _1_1_2679_2679 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18980.18980.3 13.75 13.75 3.652 5 1 1 0 722.7081 2086.1432 T2679t TMT10 2674 (R) SPTGNtPPVIDSVSEK (A) S(0.0)PT(0.0)GNT(0.99)PPVIDS(0.0)VS(0.0)EK K:TMT10,t:Phosphorylated T APC 313808.5 1 50 33.1 890.71 HUMAN 1 2.2636 -9.991 GRSSGSPYGGGYGSG-p P51991;Y360-p GRSSGSPYGGGYGSG 0.318581896668086 0.184365517147161 0.241666666666667 -0.192333333333333 9.29547288685633 9.65528987730687 0.241666666666667 -0.192333333333333 0.117612291413085 0.108260745222291 1.85952353726761 -1.92113281824697 P51991 HNRNPA3 P51991.Y360.p_HNRNPA3 P51991_Y360y _1_1_360_360 P51991 P51991|P51991-2 Heterogeneous nuclear ribonucleoprotein A3 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.7623.8368.2 24.1 24.1 2.832 9 1 1 0 1110.4673 2139.9529 Y360y TMT10 355 (R) SSGSPyGGGYGSGGGSGGYGSR (R) S(0.0)S(0.0)GS(0.0)PY(0.99)GGGY(0.0)GS(0.0)GGGS(0.0)GGY(0.0)GS(0.0)R y:Phosphorylated Y HNRNPA3 39822.5 3 2 62.1 37.54 HUMAN 1 9.2955 -9.6553 GRSTDEYSEADEEEE-p Q96T23;S1282-p GRSTDEYSEADEEEE 0.165364843830317 0.012912793147704 0.282 0.377666666666667 15.6465379273374 26.3022901410461 0.282 0.377666666666667 0.0272487263382679 0.00234299297199174 3.00061231030053 5.37418253534401 Q96T23 RSF1 Q96T23.S1282.p_RSF1 Q96T23_S1282s _1_1_1282_1282 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7968.7968.4 22.05 22.05 2.838 5 1 1 0 778.5944 3031.3904 S1282s Hydrogen 1277 (R) STDEYsEADEEEEEEEGKPSRK (R) S(0.0)T(0.0)DEY(0.0)S(0.99)EADEEEEEEEGKPS(0.0)RK K:TMT10-Lys-Only,s:Phosphorylated S RSF1 165358.1 6 18 39.1 857.38 HUMAN 1 15.6465 26.3023 GRTKGYNSDDNLCEP-p Q9P219;S1547-p GRTKGYNSDDNLCEP 0.176410337575028 0.0721015882979491 0.226 0.216333333333333 14.9607624410929 15.1761035318226 0.226 0.216333333333333 0.0319097760252433 0.0303661439749988 2.87109536960106 2.90961920408792 Q9P219 CCDC88C Q9P219.S1547.p_CCDC88C Q9P219_S1547s _1_1_1547_1547 Q9P219 Q9P219|Q9P219-2|A0A0A0MR69 Protein Daple HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20405.20405.3 28.23 28.23 6.021 3 1 1 0 934.4079 2721.2412 S1547s TMT10 1544 (K) GYNsDDNLCEPSLEFEVPNHR (Q) GY(0.0)NS(0.99)DDNLCEPS(0.0)LEFEVPNHR C:Carbamidomethylation,s:Phosphorylated S CCDC88C 229367.3 3 9 742.1 234.08 HUMAN 1 14.9608 15.1761 GRTKKKASFDHSPDS-p Q8NB78;S13-p GRTKKKASFDHSPDS 0.960420214725763 0.402770704947899 0.00933333333333332 -0.081 0.336650820078125 5.25355425206236 0.00933333333333332 -0.081 0.925411555101106 0.298294039088302 0.0980640356052588 -1.15008427258783 Q8NB78 KDM1B Q8NB78.S13.p_KDM1B Q8NB78_S13sS17s_2_2_13_17 Q8NB78 Q8NB78|Q8NB78-2 Lysine-specific histone demethylase 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13950.13950.4 9.29 9.29 4.485 3 2 2 0 637.0851 2385.3857 S13s S17s TMT10 10 (K) KKAsFDHsPDSLPLR (S) KKAS(0.99)FDHS(0.99)PDS(0.0)LPLR K:TMT10,s:Phosphorylated S KDM1B 93523 2 4 2230.1 92.53 HUMAN 1 0.3367 -5.2536 GRTLNYQSLPHRSRT-p Q70EL1;S1531-p GRTLNYQSLPHRSRT 0.358160899463675 0.623871840618302 0.298333333333333 0.102333333333333 8.28748282672531 2.78636612705965 0.298333333333333 0.102333333333333 0.148337760253135 0.526457585093733 1.68499797653289 0.676585319022904 Q70EL1 USP54 Q70EL1.S1531.p_USP54 Q70EL1_S1531s _1_1_1531_1531 Q70EL1 Q70EL1|Q70EL1-7|Q70EL1-8|Q70EL1-10|Q70EL1-9 Inactive ubiquitin carboxyl-terminal hydrolase 54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11518.11518.2 12.06 12.06 5.494 3 1 1 0 769.39 1457.8062 S1531s TMT10 1526 (R) TLNYQsLPHR (S) T(0.0)LNY(0.0)QS(0.99)LPHR s:Phosphorylated S USP54 189724.2 2 16 525.1 282.54 HUMAN 1 8.2875 2.7864 GRTNIPLSPTLTTKS-p E9PHH0;S300-p GRTNIPLSPTLTTKS 0.248650960362662 0.382434960348958 0.267666666666667 -0.107 11.5377795731538 5.54594434903828 0.267666666666667 -0.107 0.070181402469205 0.278872419794184 2.25060746398642 -1.20296520220315 E9PHH0 MBD5 E9PHH0.S300.p_MBD5 E9PHH0_S300s _1_1_300_300 E9PHH0 E9PHH0|Q9P267|A0A0D9SG23|Q9P267-2 Methyl-CpG-binding domain protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22156.22156.3 9.56 9.56 1.146 5 1 1 0 608.6804 1744.0621 S300s TMT10 295 (R) TNIPLsPTLTTK (S) T(0.0)NIPLS(0.99)PT(0.0)LT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S MBD5 185049 1 1 3416.1 51.66 HUMAN 1 11.5378 -5.5459 GRTSRTASLVSGLLN-p Q9Y2I9;S80-p GRTSRTASLVSGLLN 0.828102470990375 0.213955705927808 0.046 0.430666666666667 1.57370735033967 8.81148960270838 0.046 0.430666666666667 0.696032093359061 0.131477379571768 0.4121807568082 1.77510745337971 Q9Y2I9 TBC1D30 Q9Y2I9.S80.p_TBC1D30 Q9Y2I9_S80s _1_1_80_80 Q9Y2I9 Q9Y2I9 TBC1 domain family member 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.37209.37209.3 30.02 30.02 1.125 6 1 1 0 1008.1348 2942.4251 S80s TMT10 78 (R) TAsLVSGLLNELYSCTEEEEAAGGGR (G) T(0.0)AS(0.99)LVS(0.0)GLLNELY(0.0)S(0.0)CT(0.0)EEEEAAGGGR C:Carbamidomethylation,s:Phosphorylated S TBC1D30 103654.4 5 3 283.1 386.67 HUMAN 1 1.5737 8.8115 GRTVKSESPGVRRKR-p Q13233;S266-p GRTVKSESPGVRRKR 0.917775793672083 0.0126897319653483 -0.017 -0.427666666666667 0.728756997845474 26.4391580334815 -0.017 -0.427666666666667 0.845520808584384 0.00227030495314129 -0.204384028261659 -5.41048601805574 Q13233 MAP3K1 Q13233.S266.p_MAP3K1 Q13233_S266s _1_1_266_266 Q13233 Q13233 Mitogen-activated protein kinase kinase kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4729.4729.2 9.87 2.45 2.524 2 1 1 0 520.7529 960.5312 S266s TMT10 264 (K) SEsPGVR (R) S(0.0)ES(0.99)PGVR s:Phosphorylated S MAP3K1 166521 3 5 505.1 289.91 HUMAN 1 -0.7288 -26.4392 GRVDEEPTNEEDNLF-p A0A087WYF6;T310-p GRVDEEPTNEEDNLF 0.216176876680908 0.645798242996283 0.642666666666667 0.145333333333333 12.8202011145496 2.58884977249028 0.642666666666667 0.145333333333333 0.0522371998260796 0.550953596962995 2.47871804509972 0.635507680345176 A0A087WYF6 FAM21A A0A087WYF6.T310.p_FAM21A A0A087WYF6_T310t_1_1_310_310 A0A087WYF6 A0A087WYF6|Q9Y4E1-5 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.33866.33866.5 9.53 9.53 3.66 5 1 1 0 888.8148 4358.1029 T310t N311n N315n Hydrogen 305 (R) VDEEPtnEEDnLFAPPKLTDEDFSPFGSGGGLFSGGK (G) VDEEPT(0.99)N(1.0)EEDN(1.0)LFAPPKLT(0.0)DEDFS(0.0)PFGS(0.0)GGGLFS(0.0)GGK K:TMT10-Lys-Only,t:Phosphorylated T,n:Deamidated WASHC2A 136739.4 1 1 12.3 1178.3 HUMAN 1 12.8202 2.5888 GRVGRAISSASIEGL-p Q9Y618;S1331-p GRVGRAISSASIEGL 0.154754532748189 0.356698754311418 0.245333333333333 -0.112 16.2766871505487 5.93840902263221 0.245333333333333 -0.112 0.0235684642857767 0.254776341930453 3.12149898940366 -1.27328388614661 Q9Y618 NCOR2 Q9Y618.S1331.p_NCOR2 Q9Y618_S1331s _1_1_1331_1331 Q9Y618 Q9Y618|Q9Y618-3 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24522.24522.2 9.57 4.05 1.139 3 1 1 0 800.9026 1520.8304 S1331s TMT10 1329 (R) AIsSASIEGLMGR (A) AIS(0.99)S(0.0)AS(0.0)IEGLMGR s:Phosphorylated S NCOR2 275540.8 1 19 16.1 1053.89 HUMAN 1 16.2767 -5.9384 GRVIGKFSIRLVPHM-p Q96KN2;S374-p GRVIGKFSIRLVPHM 0.694699286180922 0.210672567988127 -0.0543333333333334 -0.156666666666667 2.96780447563904 8.89692214262911 -0.0543333333333334 -0.156666666666667 0.504916487609314 0.128916286141638 -0.713865404967559 -1.78988382881478 Q96KN2 CNDP1 Q96KN2.S374.p_CNDP1 Q96KN2_S374sS384s_2_2_374_384 Q96KN2 Q96KN2|J3KRP0 Beta-Ala-His dipeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8289.8289.5 8.54 2.74 99 2 2 2 0 569.3106 2682.5893 S374s S384s Hydrogen 369 (R) VIGKFsIRLVPHMNVsAVEK (Q) VIGKFS(1.0)IRLVPHMNVS(1.0)AVEK K:TMT10-Lys-Only,s:Phosphorylated S CNDP1 56819.2 1 1 6948.1 8.54 HUMAN 1 -2.9678 -8.8969 GRVMLGETNPADSKP-p Q32Q12;T119-p GRVMLGETNPADSKP 0.934121732880443 0.210487339793182 0.013 0.190666666666667 0.582232233100879 8.9031057472207 0.013 0.190666666666667 0.874534157293487 0.128732862191544 0.165531752860851 1.79095334615712 Q32Q12 NotFound Q32Q12.T119.p_NotFound Q32Q12_T119t _1_1_119_119 Q32Q12 Q32Q12|P22392-2|J3KPD9|P15531-2|E7ERL0|O60361 Nucleoside diphosphate kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16926.16926.3 18.39 18.39 7.997 3 1 1 0 775.4084 2244.2422 T119t TMT10 114 (R) VMLGEtNPADSKPGTIR (G) VMLGET(0.99)NPADS(0.0)KPGT(0.0)IR K:TMT10,t:Phosphorylated T NME1-NME2 32926.7 12 2 2569.1 78.26 HUMAN 1 0.5822 8.9031 GRVRAKLSAPLAGMG-p E3W994;S430-p GRVRAKLSAPLAGMG 0.850897358323661 0.13132276816287 -0.028 -0.229 1.35719364270129 11.6223197976861 -0.028 -0.229 0.731611689207798 0.0688284548771562 -0.361223245830813 -2.26442990536881 E3W994 NotFound E3W994.S430.p_NotFound E3W994_S430s _1_1_430_430 E3W994 O75122-3|E7EW49|E7ERI8|A0A0U1RQI6|J3KR49|E3W994 CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18314.18314.4 11.22 11.22 99 1 1 1 0 524.8024 2016.2243 S430s TMT10 427 (R) AKLsAPLAGMGNAK (A) AKLS(1.0)APLAGMGNAK K:TMT10,s:Phosphorylated S CLASP2 139660.6 1 6 158.1 498.15 HUMAN 1 -1.3572 -11.6223 GRVTVHSTPVRRSSG-p Q9NYZ3;T489-p GRVTVHSTPVRRSSG 0.221440669353428 0.00840448513471 0.213333333333333 -0.572 12.6034565370175 29.475756331934 0.213333333333333 -0.572 0.0549103669898982 0.00112829942496912 2.4398513715741 -6.26449160666613 Q9NYZ3 GTSE1 Q9NYZ3.T489.p_GTSE1 Q9NYZ3_T489t _1_1_489_489 Q9NYZ3 Q9NYZ3 G2 and S phase-expressed protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4156.4156.3 11.12 11.12 1.113 3 1 1 0 487.603 1380.8273 T489t TMT10 484 (R) VTVHStPVRR (S) VT(0.0)VHS(0.0)T(0.99)PVRR t:Phosphorylated T GTSE1 77156.9 1 11 271.1 394.28 HUMAN 1 12.6035 -29.4758 GRVWKDRSKKRFSQM-p Q9H6F5;S250-p GRVWKDRSKKRFSQM 0.0613809554565416 0.00781271525487499 0.399 -0.488 26.4093323562767 30.0642143939146 0.399 -0.488 0.0022859501969709 0.000985322864186622 5.40980341130882 -6.44144586653503 Q9H6F5 CCDC86 Q9H6F5.S250.p_CCDC86 Q9H6F5_S250s _1_1_250_250 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9098.9098.4 9.71 9.71 99 1 1 1 0 422.2485 1606.0044 S250s TMT10 245 (R) VWKDRsK (K) VWKDRS(1.0)K K:TMT10,s:Phosphorylated S CCDC86 40349 1 14 346.1 352.36 HUMAN 1 26.4093 -30.0642 GRWAELLSPLDESRA-p Q9H6K5;S1310-p GRWAELLSPLDESRA 0.0312466386451101 0.00385233994224125 -0.608666666666667 -1.03633333333333 35.1677075291856 35.7115929747076 -0.608666666666667 -1.03633333333333 0.000304249061374657 0.000268435965272689 -8.17210089304304 -8.35990032294817 Q9H6K5 PRR36 Q9H6K5.S1310.p_PRR36 Q9H6K5_S1310s _1_1_1310_1310 Q9H6K5 Q9H6K5|Q9H6K5-2 Proline-rich protein 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.34539.34539.3 19.52 18.29 4.956 3 1 1 0 903.4565 2628.3831 S1310s TMT10 1295 (R) AALSDAELGRWAELLsPLDESR (A) AALS(0.0)DAELGRWAELLS(0.99)PLDES(0.0)R s:Phosphorylated S PRR36 133030.9 4 7 1580.1 130 HUMAN 1 -35.1677 -35.7116 GRWAKGMSADYEEIL-p Q8N567;S246-p GRWAKGMSADYEEIL 0.662823151937847 0.250866356481305 -0.098 0.256 3.34289820142372 7.91205950038626 -0.098 0.256 0.463137748308103 0.161731289770083 -0.78923833566765 1.61939414473407 Q8N567 ZCCHC9 Q8N567.S246.p_ZCCHC9 Q8N567_S246s _1_1_246_246 Q8N567 Q8N567 Zinc finger CCHC domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23834.23834.4 16.4 16.4 4.111 2 1 1 0 786.1827 3061.7414 S246s TMT10 244 (K) GMsADYEEILDVPKPQKPK (T) GMS(0.99)ADY(0.0)EEILDVPKPQKPK K:TMT10,s:Phosphorylated S ZCCHC9 31161.1 1 1 5775.1 16.4 HUMAN 1 -3.3429 7.9121 GRWEEHRSLLSGRAT-p Q14126;S723-p GRWEEHRSLLSGRAT 0.464416584532636 0.270097257844209 0.115333333333333 0.180333333333333 6.1463448982246 7.48501788405929 0.115333333333333 0.180333333333333 0.242865323416278 0.17844246403416 1.31059208758598 1.54521699295337 Q14126 DSG2 Q14126.S723.p_DSG2 Q14126_S723s _1_1_723_723 Q14126 Q14126 Desmoglein-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11171.11171.4 15.13 15.13 1.116 3 1 1 0 734.8322 2856.3467 S723s TMT10 707 (K) GQHEMSEMDGRWEEHRsLLSGR (A) GQHEMS(0.0)EMDGRWEEHRS(0.99)LLS(0.0)GR s:Phosphorylated S DSG2 123090.5 3 4 494.1 293.66 HUMAN 1 6.1463 7.485 GRYNPRRSLEQNIQL-p P33993;S500-p GRYNPRRSLEQNIQL 0.179138671438835 0.361534262517083 0.212666666666667 -0.125 14.7467767876036 5.86200147239225 0.212666666666667 -0.125 0.0335214133430609 0.259298409431079 2.83109249353447 -1.25964779621742 P33993 MCM7 P33993.S500.p_MCM7 P33993_S500s _1_1_500_500 P33993 P33993|P33993-3 DNA replication licensing factor MCM7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.30365.30365.3 21.56 21.56 21.565 2 1 1 0 654.693 1882.0959 S500s TMT10 500 (R) sLEQNIQLPAALLSR (F) S(0.99)LEQNIQLPAALLS(0.0)R s:Phosphorylated S MCM7 81934.1 8 5 1064.1 181.73 HUMAN 1 14.7468 -5.862 GRYRSPYSGPKFNSA-p Q14498;S100-p GRYRSPYSGPKFNSA 0.885069082704287 0.572635187199427 -0.0213333333333333 -0.0536666666666666 1.04740454361522 3.26346041787946 -0.0213333333333333 -0.0536666666666666 0.785705052031177 0.471687055651016 -0.285727450267667 -0.77332028399581 Q14498 RBM39 Q14498.S100.p_RBM39 Q14498_S100s _1_1_100_100 Q14498 Q14498|Q14498-2|G3XAC6 RNA-binding protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6545.6545.2 11.56 11.56 3.842 3 1 1 0 522.7517 964.5301 S100s Hydrogen 97 (R) SPYsGPK (F) S(0.0)PY(0.0)S(0.99)GPK K:TMT10-Lys-Only,s:Phosphorylated S RBM39 59663.8 3 3 915.1 200.83 HUMAN 1 -1.0474 -3.2635 GRYYGGGSEGGRAPK-p P14866;S52-p GRYYGGGSEGGRAPK 0.338641684336322 0.135150564372141 0.157333333333333 0.188666666666667 8.74791250501409 11.4580645411783 0.157333333333333 0.188666666666667 0.133416256129173 0.0714814816515684 1.76472624488118 2.23550559135932 P14866 HNRNPL P14866.S52.p_HNRNPL P14866_S52s _1_1_52_52 P14866 P14866 Heterogeneous nuclear ribonucleoprotein L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7304.7304.4 14.32 14.32 5.54 3 1 1 0 459.9814 1756.9383 S52s TMT10 47 (R) YYGGGsEGGRAPK (R) Y(0.0)Y(0.0)GGGS(0.99)EGGRAPK K:TMT10,s:Phosphorylated S HNRNPL 64759.2 8 1 846.1 213.74 HUMAN 1 8.7479 11.4581 GSAAPQGSP______-p F8W130;S867-p GSAAPQGSP______ 0.69223739326445 0.748692032590407 0.07 -0.0556666666666667 2.99536573807127 1.7365076606282 0.07 -0.0556666666666667 0.501722325061592 0.670423507646917 0.719470870712197 -0.449575672230966 F8W130 TROAP F8W130.S867.p_TROAP F8W130_S867s _1_1_867_867 F8W130 F8W130|Q12815|F8W1U0 Tastin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.38247.38247.3 27.46 27.46 3.147 4 1 1 0 1169.8997 3427.7228 S867s TMT10 839 (R) VCTNPVATLLEWQDALCFIPVGSAAPQGsP (-) VCT(0.0)NPVAT(0.0)LLEWQDALCFIPVGS(0.0)AAPQGS(0.99)P C:Carbamidomethylation,s:Phosphorylated S TROAP 95330.1 4 5 1545.1 132.83 HUMAN 1 2.9954 -1.7365 GSAEPTKTRKSPSSD-p Q8N6T3;T340-p GSAEPTKTRKSPSSD 0.771638354290043 0.0075670083727856 -0.0406666666666667 -0.451666666666667 2.15854972928905 30.3110705318449 -0.0406666666666667 -0.451993289150247 0.608338114072798 0.000930878386531035 -0.543634600806187 -6.51685770067991 Q8N6T3 ARFGAP1 Q8N6T3.T340.p_ARFGAP1 Q8N6T3_T340t _1_1_340_340 Q8N6T3 Q8N6T3-2|Q8N6T3-5|F8VWH9|Q8N6T3-4 ADP-ribosylation factor GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5908.5908.3 7.94 6.65 1.165 9 1 1 0 956.1233 2786.3892 T340t TMT10 340 (K) tRKSPSSDSWTCADTSTERR (S) T(0.99)RKS(0.0)PS(0.0)S(0.0)DS(0.0)WT(0.0)CADT(0.0)S(0.0)T(0.0)ERR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ARFGAP1 45009.4 5 11 243.1 413.25 HUMAN 1 -2.1585 -30.3111 GSAGGGGSGSLPSQR-p O15234;S45-p GSAGGGGSGSLPSQR 0.682714819951469 0.475354766124921 0.142333333333333 0.075 3.10643557933114 4.30739735638517 0.142333333333333 0.075 0.489053579621527 0.370902930212499 0.741948883025422 0.975276816727857 O15234 CASC3 O15234.S45.p_CASC3 O15234_S45s _1_1_45_45 O15234 O15234 Protein CASC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5160.5160.3 23.16 23.16 2.157 6 1 1 0 696.9702 2008.9304 S45s TMT10 32 (R) GGGSCSGSAGGGGsGSLPSQR (G) GGGS(0.0)CS(0.0)GS(0.0)AGGGGS(0.99)GS(0.0)LPS(0.0)QR C:Carbamidomethylation,s:Phosphorylated S CASC3 76390.7 2 2 323.1 362.08 HUMAN 1 3.1064 4.3074 GSAGQPRSEDEDSLE-p Q8TBB5;S413-p GSAGQPRSEDEDSLE 0.269890028838605 0.2553286116758 -0.181666666666667 -0.115333333333333 10.7785505660846 7.81010543710639 -0.181666666666667 -0.115333333333333 0.083588194267882 0.165572976552047 -2.11735688932443 -1.60170573369891 Q8TBB5 KLHDC4 Q8TBB5.S413.p_KLHDC4 Q8TBB5_S413s _1_1_413_413 Q8TBB5 Q8TBB5|Q8TBB5-3|Q8TBB5-2 Kelch domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15248.15248.3 22.67 22.67 2.225 5 1 1 0 1224.5667 3591.7183 S413s TMT10 400 (K) QVLTAPGSAGQPRsEDEDSLEEAGSPAPGPCPR (S) QVLT(0.0)APGS(0.0)AGQPRS(0.99)EDEDS(0.0)LEEAGS(0.0)PAPGPCPR C:Carbamidomethylation,s:Phosphorylated S KLHDC4 58289.9 4 2 3120.1 60.27 HUMAN 1 -10.7786 -7.8101 GSAGRSQTPPGVATP-p Q15648;T1051-p GSAGRSQTPPGVATP 0.370598822510599 0.102258132282505 0.146 0.219333333333333 7.9934390743034 13.0815018978798 0.146 0.219333333333333 0.158728931428995 0.0491869405642993 1.63402243883589 2.52436813468391 Q15648 MED1 Q15648.T1051.p_MED1 Q15648_T1051t _1_1_1051_1051 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19223.19223.2 17.76 14.85 2.42 3 1 1 0 964.5369 1848.0995 T1051t TMT10 1049 (R) SQtPPGVATPPIPK (I) S(0.0)QT(0.99)PPGVAT(0.0)PPIPK K:TMT10,t:Phosphorylated T MED1 169445 9 11 115.1 566.87 HUMAN 1 7.9934 13.0815 GSAGSPGSPTCCRCK-p A4D1S0;S215-p GSAGSPGSPTCCRCK 0.813083216141779 0.175844262468618 -0.0493333333333333 -0.203333333333333 1.72606072159359 9.92623939978497 -0.0493333333333333 -0.203333333333333 0.672038150351249 0.101712905408103 -0.447243733267184 -1.96810923924984 A4D1S0 KLRG2 A4D1S0.S215.p_KLRG2 A4D1S0_S215s _1_1_215_215 A4D1S0 A4D1S0|A4D1S0-2 Killer cell lectin-like receptor subfamily G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5528.5942.2 15.49 11.92 1.573 5 1 1 0 1029.4338 1977.8956 S215s TMT10 203 (R) ASPAEGSAGSPGsPTCCR (C) AS(0.0)PAEGS(0.0)AGS(0.0)PGS(0.99)PT(0.0)CCR C:Carbamidomethylation,s:Phosphorylated S KLRG2 43534.4 2 13 945.1 197.69 HUMAN 1 -1.7261 -9.9262 GSAKHGLYLPTRVTA-p P49327;Y1047-p GSAKHGLYLPTRVTA 0.619741134857635 0.569725989622367 0.0746666666666667 -0.0799999999999999 3.86227524434201 3.29304704736735 0.0746666666666667 -0.0799999999999999 0.410934378493526 0.468484574012583 0.890710154070063 -0.779214454627582 P49327 FASN P49327.Y1047.p_FASN P49327_Y1047y _1_1_1047_1047 P49327 P49327|A0A0U1RQF0 Fatty acid synthase GG20160819_MSz_CCLE_T4D7_pY_Injection_01.14433.14477.3 11.89 11.89 11.893 2 1 1 0 422.5592 1185.6942 Y1047y TMT10 1044 (K) HGLyLPTR (V) HGLY(0.99)LPT(0.0)R y:Phosphorylated Y FASN 276046.1 3 2 94.1 29.31 HUMAN 1 3.8623 -3.293 GSAKPLDYVEIHKVN-p P16471;Y509-p GSAKPLDYVEIHKVN 0.949272863477047 0.974852051666963 -0.0126666666666667 0.00666666666666673 0.447788149591684 0.156399295955257 -0.0126666666666667 0.00666666666666674 0.902030422368586 0.96462845863271 -0.128982068625125 0.0464316083028364 P16471 PRLR P16471.Y509.p_PRLR P16471_Y509y _1_1_509_509 P16471 P16471|P16471-2 Prolactin receptor GG20160819_MSz_CCLE_T4D7_pY_Injection_01.25253.25305.4 17.24 17.24 4.635 3 1 1 0 643.1075 2489.4371 Y509y TMT10 499 (K) TPFGSAKPLDyVEIHK (V) T(0.0)PFGS(0.0)AKPLDY(0.99)VEIHK K:TMT10,y:Phosphorylated Y PRLR 70474.2 1 1 82.1 31.46 HUMAN 1 -0.4478 0.1564 GSAPTFCSDDEDVAP-p A0A1B0GVL4;S584-p GSAPTFCSDDEDVAP 0.986950836177615 0.319015385274835 -0.00266666666666667 -0.095 0.116361159313584 6.56162414995156 -0.00266666666666666 -0.095 0.973562604961157 0.220717915027431 -0.034700559552569 -1.38367925504752 A0A1B0GVL4 NotFound A0A1B0GVL4.S584.p_NotFound A0A1B0GVL4_S584s _1_1_584_584 A0A1B0GVL4 A0A1B0GVL4|P78312|P78312-2|P78312-6|P78312-4|D6RFZ4|P78312-3 Protein FAM193A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30049.30049.3 22.58 22.58 1.605 6 1 1 0 1049.8463 3067.5546 S584s TMT10 571 (R) LILTDSGSAPTFCsDDEDVAPLSAK (F) LILT(0.0)DS(0.0)GS(0.0)APT(0.0)FCS(0.99)DDEDVAPLS(0.0)AK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM193A 168423.2 5 2 1381.1 148.28 HUMAN 1 -0.1164 -6.5616 GSAQADGSDSEKP__-p Q9NYQ6;S3009-p GSAQADGSDSEKP__ 0.140621777582522 0.17698143683841 0.281 0.151666666666667 17.4348982625295 9.89168745504913 0.281 0.151666666666667 0.0180513702362868 0.102525348570089 3.34878875194581 1.96211507285426 Q9NYQ6 CELSR1 Q9NYQ6.S3009.p_CELSR1 Q9NYQ6_S3009s _1_1_3009_3009 Q9NYQ6 Q9NYQ6 Cadherin EGF LAG seven-pass G-type receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7444.7444.2 12.25 12.25 2.679 4 1 1 0 944.4407 1807.9074 S3009s TMT10 3001 (R) TGSAQADGsDSEKP (-) T(0.0)GS(0.0)AQADGS(0.99)DS(0.0)EKP K:TMT10,s:Phosphorylated S CELSR1 334558.1 4 8 1317.1 154.7 HUMAN 1 17.4349 9.8917 GSAVKRFSISFARHP-p A0A087WZV0;S1123-p GSAVKRFSISFARHP 0.154754532748189 0.994279975197934 -0.597 0.00133333333333335 16.2815448065372 0.0351680881438244 -0.597 0.00133333333333337 0.0235421173041251 0.991934946918295 -3.12243818387996 0.0105825857803455 A0A087WZV0 PPIP5K2 A0A087WZV0.S1123.p_PPIP5K2 A0A087WZV0_S1123s _1_1_1123_1123 A0A087WZV0 A0A087WZV0|O43314 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17271.17271.3 9.66 9.66 2.92 2 1 1 0 431.5624 1212.7051 S1123s TMT10 1121 (K) RFsISFAR (H) RFS(0.99)IS(0.0)FAR s:Phosphorylated S PPIP5K2 145671.7 1 8 778.1 226.58 HUMAN 1 -16.2815 0.0352 GSCCTIMSPGEMEKH-p Q9H211;S491-p GSCCTIMSPGEMEKH 0.187294971032731 0.0184681420245719 -0.217 -0.403666666666667 14.2765636983295 23.85698434061 -0.217 -0.403666666666667 0.0373545604260935 0.00411435314899932 -2.7438389039937 -4.75440661624477 Q9H211 CDT1 Q9H211.S491.p_CDT1 Q9H211_S491s _1_1_491_491 Q9H211 Q9H211 DNA replication factor Cdt1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21580.21580.3 14.72 14.72 3.521 3 1 1 0 785.6811 2275.0665 S491s TMT10 482 (R) MVGSCCTIMsPGEMEK (H) MVGS(0.0)CCT(0.0)IMS(0.99)PGEMEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CDT1 60959.8 1 7 1732.1 118.73 HUMAN 1 -14.2766 -23.857 GSCKHLNSLPRNVSP-p O94986;S1455-p GSCKHLNSLPRNVSP 0.288657613845318 0.0198490672400033 0.207333333333333 -0.386333333333333 10.175021976931 23.3504123296118 0.207333333333333 -0.386333333333333 0.0960500957879048 0.00462337123918462 2.01213483138822 -4.63246577367211 O94986 CEP152 O94986.S1455.p_CEP152 O94986_S1455s _1_1_1455_1455 O94986 O94986|O94986-3 Centrosomal protein of 152 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8217.8217.2 9.3 3 99 1 1 1 0 573.3049 1065.6366 S1455s TMT10 1452 (K) HLNsLPR (N) HLNS(1.0)LPR s:Phosphorylated S CEP152 198019.2 2 8 1197.1 167.32 HUMAN 1 10.175 -23.3504 GSCRLPLSPSLLVKG-p O00750;S1041-p GSCRLPLSPSLLVKG 0.41497741506359 0.199252830471257 -0.125666666666667 -0.147 7.0468122947591 9.21824160488453 -0.125666666666667 -0.147 0.197387101847199 0.11972251722269 -1.46920499486217 -1.84546675753583 O00750 PIK3C2B O00750.S1041.p_PIK3C2B O00750_S1041s _1_1_1041_1041 O00750 O00750|F5GWN5 Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.33378.33378.2 12.38 12.38 2.476 2 1 1 0 802.9938 1525.0129 S1041s TMT10 1038 (R) LPLsPSLLVK (G) LPLS(0.99)PS(0.0)LLVK K:TMT10,s:Phosphorylated S PIK3C2B 186932.5 1 7 1730.1 119.12 HUMAN 1 -7.0468 -9.2182 GSCSPFPSPEPKDPS-p Q96HI0;S293-p GSCSPFPSPEPKDPS 0.603716896580728 0.490445693994919 0.092 -0.124333333333333 4.04610526096367 4.13614037203956 0.092 -0.124333333333333 0.393903168208464 0.385821089249904 0.925932462329663 -0.942901401390376 Q96HI0 SENP5 Q96HI0.S293.p_SENP5 Q96HI0_S293s _1_1_293_293 Q96HI0 Q96HI0 Sentrin-specific protease 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9908.9908.4 7 7 7.001 4 1 1 0 772.1023 3005.4246 S293s TMT10 280 (R) RENGEGGSCSPFPsPEPKDPSCR (H) RENGEGGS(0.0)CS(0.0)PFPS(0.99)PEPKDPS(0.0)CR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SENP5 88003.7 1 3 1582.1 129.81 HUMAN 1 4.0461 -4.1361 GSCSQKESEEGNPVR-p O43719;S485-p GSCSQKESEEGNPVR 0.712677932018996 0.479703461565193 0.108 0.116666666666667 2.76769619214127 4.25674303624149 0.108 0.116666666666667 0.52872565121366 0.37525431632781 0.672820472304356 0.965727643133565 O43719 HTATSF1 O43719.S485.p_HTATSF1 O43719_S485s _1_1_485_485 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6452.6452.4 11.56 6.48 2.267 3 1 1 0 673.5709 2611.2935 S485s TMT10 474 (K) RGFEGSCSQKEsEEGNPVR (G) RGFEGS(0.0)CS(0.0)QKES(0.99)EEGNPVR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HTATSF1 86421.8 1 7 149.1 512 HUMAN 1 2.7677 4.2567 GSDAPPGSPDWAGDV-p Q96PE2;S619-p GSDAPPGSPDWAGDV 0.262738058826361 0.108710361083014 -0.179 -0.214666666666667 11.012285386041 12.7320888147387 -0.179 -0.214666666666667 0.0792084402545351 0.0533078440484896 -2.15826178106916 -2.46158355092478 Q96PE2 ARHGEF17 Q96PE2.S619.p_ARHGEF17 Q96PE2_S619s _1_1_619_619 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17441.17441.2 22.81 22.81 3.475 3 1 1 0 1370.0883 2659.1892 S619s TMT10 605 (R) MGAQQDDGSDAPPGsPDWAGDVTR (G) MGAQQDDGS(0.0)DAPPGS(0.99)PDWAGDVT(0.0)R s:Phosphorylated S ARHGEF17 223779.6 4 21 30.1 908.19 HUMAN 1 -11.0123 -12.7321 GSDDAPYSPTARVGP-p O75151;S905-p GSDDAPYSPTARVGP 0.746535087534117 0.411151871896824 -0.0513333333333333 -0.109333333333333 2.40943730872035 5.13516613053124 -0.0513333333333333 -0.109333333333333 0.574190852113042 0.306537341755029 -0.597680044111606 -1.12853792654462 O75151 PHF2 O75151.S905.p_PHF2 O75151_S905s _1_1_905_905 O75151 O75151|A0A087WW48|E7ET14 Lysine-specific demethylase PHF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4669.4669.4 17.4 12.11 1.901 4 1 1 0 515.5155 1979.0711 S905s TMT10 896 (K) RKGSDDAPYsPTAR (V) RKGS(0.0)DDAPY(0.0)S(0.99)PT(0.0)AR K:TMT10,s:Phosphorylated S PHF2 121742.7 5 11 376.2 336.84 HUMAN 1 -2.4094 -5.1352 GSDEEDDSGKDKKKK-p P08238;S261-p GSDEEDDSGKDKKKK 0.822004837548017 0.276787387394678 -0.0516666666666667 0.295666666666667 1.63801164971098 7.35092319245994 -0.0516666666666667 0.295666666666667 0.685802138516883 0.184038074477701 -0.427056249914758 1.52186955034624 P08238 HSP90AB1 P08238.S261.p_HSP90AB1 P08238_S255sS261s_2_2_255_261 P08238 P08238|Q58FF8 Heat shock protein HSP 90-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12864.12864.4 9.72 9.72 99 2 2 2 0 736.3582 2782.4764 S255s S261s TMT10 250 (K) IEDVGsDEEDDsGKDKK (K) IEDVGS(1.0)DEEDDS(1.0)GKDKK K:TMT10,s:Phosphorylated S HSP90AB1 83605 3 41 43.2 810.87 HUMAN 1 -1.638 7.3509 GSDEFDISPRISKQQ-p Q8IWI9-4;S2541-p GSDEFDISPRISKQQ 0.344749992751287 0.0057637582796328 -0.131666666666667 -0.743666666666667 8.59073482846228 32.3873431532038 -0.131666666666667 -0.743666666666667 0.138333229864375 0.000577119414906842 -1.73751666105478 -7.18008162034563 Q8IWI9 MGA Q8IWI9.4.S2541.p_MGA Q8IWI9-4_S2541s _1_1_2541_2541 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14747.14747.3 9.64 5.48 7.421 2 1 1 0 640.6496 1839.9675 S2541s TMT10 2532 (K) KMGSDEFDIsPR (I) KMGS(0.0)DEFDIS(0.99)PR K:TMT10,s:Phosphorylated S MGA 338321.5 2 19 141.1 523.06 HUMAN 1 -8.5907 -32.3873 GSDKECVSPTARVTK-p Q9H0X9-3;S40-p GSDKECVSPTARVTK 0.340460513256575 0.00159168462790637 0.241333333333333 -1.25066666666667 8.70451324187707 44.8426823114688 0.241333333333333 -1.25066666666667 0.134756175187106 3.27892715809337e-05 1.75721364581139 -12.5397276497188 Q9H0X9 OSBPL5 Q9H0X9.3.S40.p_OSBPL5 Q9H0X9-3_S40s _1_1_40_40 Q9H0X9-3 Q9H0X9-2|Q9H0X9-3|E9PRA9 Isoform 3 of Oxysterol-binding protein-related protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8528.8528.3 10.73 5.78 1.538 3 1 1 0 744.6904 2152.0891 S40s TMT10 30 (R) LCNGSDKECVsPTAR (V) LCNGS(0.0)DKECVS(0.99)PT(0.0)AR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S OSBPL5 89402.9 2 2 2965.1 64.51 HUMAN 1 8.7045 -44.8427 GSDRLHMSLQQGKSS-p I3L4C2;S479-p GSDRLHMSLQQGKSS 0.630882905646353 0.150485631664233 -0.0743333333333333 -0.147666666666667 3.72238580905297 10.819435090252 -0.0743333333333333 -0.147666666666667 0.424386362045562 0.0828049865522695 -0.863676948728516 -2.12356574653499 I3L4C2 BAIAP2 I3L4C2.S479.p_BAIAP2 I3L4C2_S479s _1_1_479_479 I3L4C2 Q9UQB8-6|Q9UQB8-4|Q9UQB8-5|Q9UQB8-3|B4DWA1|I3L4C2 Brain-specific angiogenesis inhibitor 1-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16169.16169.3 17.27 17.27 4.633 3 1 1 0 842.093 2444.2968 S479s TMT10 467 (R) VLDSDGSDRLHMsLQQGK (S) VLDS(0.0)DGS(0.0)DRLHMS(0.99)LQQGK K:TMT10,s:Phosphorylated S BAIAP2 61608.4 5 15 386.1 333.05 HUMAN 1 -3.7224 -10.8194 GSDVKEKTPPNPKHA-p O60829;T85-p GSDVKEKTPPNPKHA 0.212702492337707 0.52906403601265 0.281333333333333 0.0876666666666667 12.9730892561655 3.71715154686987 0.281333333333333 0.0876666666666667 0.0504302445740255 0.424898155019856 2.50621887985661 0.862522751676595 O60829 PAGE4 O60829.T85.p_PAGE4 O60829_T85t_1_1_85_85 O60829 O60829 P antigen family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9311.9311.3 7.25 2.21 99 1 1 1 0 586.6769 1677.0415 T85t N88n TMT10 85 (K) tPPnPKHAK (T) T(1.0)PPN(1.0)PKHAK K:TMT10,t:Phosphorylated T,n:Deamidated PAGE4 11209.9 1 1 6470.1 11.5 HUMAN 1 12.9731 3.7172 GSEDEAPSGED____-p Q9H1E3;S240-p GSEDEAPSGED____ 0.395347640438446 0.0242784515761418 -0.1195 -0.3395 7.43406235277459 22.0046934201232 -0.1195 -0.3395 0.180548450141975 0.00630275837246545 -1.53679977483971 -4.3184347888101 Q9H1E3 NUCKS1 Q9H1E3.S240.p_NUCKS1 Q9H1E3_S229sS240s_2_2_229_240 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8304.8515.4 16.09 16.09 2.219 7 2 2 0 845.8785 3220.5584 S229s S240s TMT10 219 (K) KTSTSPPPEKsGDEGSEDEAPsGED (-) KT(0.0)S(0.0)T(0.0)S(0.0)PPPEKS(0.99)GDEGS(0.0)EDEAPS(0.99)GED K:TMT10,s:Phosphorylated S NUCKS1 27295.9 19 27 48.1 767.83 HUMAN 2 -7.4341 -22.0047 GSEGDGDTD______-p Q9Y606;T426-p GSEGDGDTD______ 0.658930636205798 0.0575190025458241 0.0866666666666667 0.300666666666667 3.40008547073688 16.5225464948529 0.0866666666666667 0.300666666666667 0.45707919404123 0.022271288846242 0.800565917777827 3.16685000014784 Q9Y606 PUS1 Q9Y606.T426.p_PUS1 Q9Y606_T426t _1_1_426_426 Q9Y606 Q9Y606|Q9Y606-2|F5H1S9|F5H168 tRNA pseudouridine synthase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19085.19085.2 15.98 15.98 4.085 3 1 1 0 892.378 1703.7809 T426t TMT10 413 (K) VPSPLEGSEGDGDtD (-) VPS(0.0)PLEGS(0.0)EGDGDT(0.99)D t:Phosphorylated T PUS1 48039.7 1 2 3709.1 44.75 HUMAN 1 3.4001 16.5225 GSELPANSPLKIPKM-p Q6P1R3;S13-p GSELPANSPLKIPKM 0.922241671010614 0.00795088644326606 0.018 -0.528 0.68986174953346 29.9474066964151 0.018 -0.528 0.853127271481232 0.00101218367930213 0.194165727780365 -6.40600738544988 Q6P1R3 MSANTD2 Q6P1R3.S13.p_MSANTD2 Q6P1R3_S13s _1_1_13_13 Q6P1R3 Q6P1R3|Q6P1R3-3|E9PPE2|B4E1M0 Myb/SANT-like DNA-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22041.22041.3 11.79 11.79 1.875 2 1 1 0 810.7668 2350.3205 S13s Acetyl 2 (M) AAPCGSELPANsPLKIPK (M) AAPCGS(0.0)ELPANS(0.99)PLKIPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MSANTD2 61945.8 4 1 1991.1 103.76 HUMAN 1 0.6899 -29.9474 GSENDTGSPDFYTPR-p Q9P2Q2;S727-p GSENDTGSPDFYTPR 0.440361201395823 0.0305005042830179 -0.11 -0.317 6.56248848124032 20.4836278215601 -0.11 -0.317 0.220673992199643 0.00894617146725665 -1.38419012283108 -3.97968001455005 Q9P2Q2 FRMD4A Q9P2Q2.S727.p_FRMD4A Q9P2Q2_S727s _1_1_727_727 Q9P2Q2 Q9P2Q2 FERM domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22199.22199.3 21.23 21.23 1.127 5 1 1 0 726.6685 2098.029 S727s TMT10 718 (K) LLGSENDTGsPDFYTPR (T) LLGS(0.0)ENDT(0.0)GS(0.99)PDFY(0.0)T(0.0)PR s:Phosphorylated S FRMD4A 116026.8 4 10 787.1 225.06 HUMAN 1 -6.5625 -20.4836 GSENRAPSPHVVQEN-p O75592;S2882-p GSENRAPSPHVVQEN 0.287507968744367 0.285851833369911 0.150666666666667 0.142666666666667 10.2084521179809 7.17580056735999 0.150666666666667 0.142666666666667 0.0953135813492998 0.191610781975494 2.0179501175154 1.49132999881417 O75592 MYCBP2 O75592.S2882.p_MYCBP2 O75592_S2882s _1_1_2882_2882 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20648.20648.4 12.11 12.11 1.813 6 1 1 0 822.1702 3205.6927 S2882s TMT10 2880 (R) APsPHVVQENLHSEVVEVCTSSTLK (T) APS(0.99)PHVVQENLHS(0.0)EVVEVCT(0.0)S(0.0)S(0.0)T(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MYCBP2 518176.7 3 15 252.1 405.77 HUMAN 1 10.2085 7.1758 GSEPAPVSAETLLSQ-p Q8TD55;S439-p GSEPAPVSAETLLSQ 0.974265885435344 0.569731709223374 -0.00700000000000001 0.110333333333333 0.221918696947629 3.29278365761635 -0.00700000000000002 0.110333333333333 0.95018491273442 0.468512987400802 -0.0654247898120067 0.779162033033973 Q8TD55 PLEKHO2 Q8TD55.S439.p_PLEKHO2 Q8TD55_S439s _1_1_439_439 Q8TD55 Q8TD55|Q8TD55-2 Pleckstrin homology domain-containing family O member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37518.37518.3 24.5 24.5 3.297 4 1 1 0 901.8125 2623.4504 S439s TMT10 430 (K) VLGSEPAPVsAETLLSQAVEQLR (Q) VLGS(0.0)EPAPVS(0.99)AET(0.0)LLS(0.0)QAVEQLR s:Phosphorylated S PLEKHO2 53691.3 3 3 2743.1 72.05 HUMAN 1 -0.2219 3.2928 GSEPLGISIVSGEKG-p Q8TDM6;S1363-p GSEPLGISIVSGEKG 0.851651836963964 0.0598201392316008 -0.028 0.239666666666667 1.35082309595926 16.2956084247355 -0.028 0.239666666666667 0.732685657840794 0.0234660049272574 -0.359702558270758 3.12290059516844 Q8TDM6 DLG5 Q8TDM6.S1363.p_DLG5 Q8TDM6_S1363s _1_1_1363_1363 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2|Q8TDM6-5 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24480.24480.2 15.04 11.16 3.803 3 1 1 0 956.0159 1831.0577 S1363s TMT10 1356 (K) GSEPLGIsIVSGEK (G) GS(0.0)EPLGIS(0.99)IVS(0.0)GEK K:TMT10,s:Phosphorylated S DLG5 215575.4 3 36 34.1 890.58 HUMAN 1 -1.3508 16.2956 GSEQAEKSPGPIVSR-p Q86WB0;S344-p GSEQAEKSPGPIVSR 0.603894408148596 0.575650599324016 -0.0736666666666667 0.057 4.04369274986994 3.23341634420379 -0.0736666666666667 0.057 0.394122042681171 0.474961454167795 -0.925472345456872 0.767323236277081 Q86WB0 ZC3HC1 Q86WB0.S344.p_ZC3HC1 Q86WB0_S344s _1_1_344_344 Q86WB0 Q86WB0|Q86WB0-2|C9J0I9 Nuclear-interacting partner of ALK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14347.14347.3 15.69 15.69 1.133 6 1 1 0 971.8187 2833.4732 S344s TMT10 329 (R) SQDATFSPGSEQAEKsPGPIVSR (T) S(0.0)QDAT(0.0)FS(0.0)PGS(0.0)EQAEKS(0.99)PGPIVS(0.0)R K:TMT10,s:Phosphorylated S ZC3HC1 56401.6 3 6 624.1 258.98 HUMAN 1 -4.0437 3.2334 GSERAPKSPDALESA-p Q13905-4;S669-p GSERAPKSPDALESA 0.967085602072181 0.0340993601540337 0.01 0.282 0.282487554747108 19.7709089836089 0.01 0.282 0.937025143319355 0.0105416623503039 0.0827500866531762 3.82642824755346 Q13905 RAPGEF1 Q13905.4.S669.p_RAPGEF1 Q13905-4_S669s _1_1_669_669 Q13905-4 Q13905-4|Q13905-2 Isoform 4 of Rap guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23932.23932.4 15.93 15.93 4.033 5 1 1 0 937.9454 3668.7799 S669s Hydrogen 666 (R) APKsPDALESAQSEEEVDELSLIDHNEIMSR (L) APKS(0.99)PDALES(0.0)AQS(0.0)EEEVDELS(0.0)LIDHNEIMS(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S RAPGEF1 123026.2 1 11 676.1 246.9 HUMAN 1 0.2825 19.7709 GSERLSLSPLRGGEA-p Q66K74;S657-p GSERLSLSPLRGGEA 0.92172992519708 0.872475270875945 -0.0283333333333333 0.0213333333333333 0.693639992594575 0.835933595517392 -0.0283333333333333 0.0213333333333333 0.852385396870002 0.824910136877548 -0.195161271461701 0.232179768516002 Q66K74 MAP1S Q66K74.S657.p_MAP1S Q66K74_S657s _1_1_657_657 Q66K74 Q66K74|Q66K74-2 Microtubule-associated protein 1S HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21370.21370.2 8.76 2.4 1.554 2 1 1 0 547.8127 1014.6509 S657s TMT10 654 (R) LSLsPLR (G) LS(0.0)LS(0.99)PLR s:Phosphorylated S MAP1S 113179.3 2 8 456.1 307.14 HUMAN 1 -0.6936 0.8359 GSERRLPTPEQIFQN-p Q9H9L7;T72-p GSERRLPTPEQIFQN 0.0887698163036001 0.0242175097911554 -0.507666666666667 -0.637666666666667 22.3978236049536 22.0183941548042 -0.507666666666667 -0.637666666666667 0.00575728381823489 0.0062829063231122 -4.4134991273055 -4.32156200355253 Q9H9L7 AKIRIN1 Q9H9L7.T72.p_AKIRIN1 Q9H9L7_T72t _1_1_72_72 Q9H9L7 Q9H9L7|Q9H9L7-2 Akirin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27490.27490.3 14.58 11.68 99 1 1 1 0 708.0657 2042.2163 T72t TMT10 69 (R) RLPtPEQIFQNIK (Q) RLPT(1.0)PEQIFQNIK K:TMT10,t:Phosphorylated T AKIRIN1 22094.6 1 2 4379.1 32.34 HUMAN 1 -22.3978 -22.0184 GSESSRASGLVGRKA-p Q9UH99;S116-p GSESSRASGLVGRKA 0.623270947229736 0.153833359179763 0.104 0.145333333333333 3.81450520149085 10.6901795610649 0.104 0.145333333333333 0.415479384762831 0.0853064842927439 0.881501809430141 2.10099918970532 Q9UH99 SUN2 Q9UH99.S116.p_SUN2 Q9UH99_S116s _1_1_116_116 Q9UH99 Q9UH99-2|Q9UH99-3 SUN domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5813.5813.3 13.03 13.03 2.241 5 1 1 0 596.2938 1706.8983 S116s TMT10 106 (R) GTGGSESSRAsGLVGR (K) GT(0.0)GGS(0.0)ES(0.0)S(0.0)RAS(0.99)GLVGR s:Phosphorylated S SUN2 80537.7 1 4 1093.1 178.7 HUMAN 1 3.8145 10.6902 GSETPGATPGSKIWD-p O75533;T248-p GSETPGATPGSKIWD 0.340998799441524 0.663746177847037 0.180333333333333 0.051 8.68725140671835 2.43750621827478 0.180333333333333 0.051 0.135292854317209 0.570491762867848 1.75422548045356 0.603573929593358 O75533 SF3B1 O75533.T248.p_SF3B1 O75533_T248t _1_1_248_248 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7048.7048.3 16.44 16.44 4.322 4 1 1 0 685.7074 1975.1427 T248t TMT10 239 (R) AKGSETPGAtPGSK (I) AKGS(0.0)ET(0.0)PGAT(0.99)PGS(0.0)K K:TMT10,t:Phosphorylated T SF3B1 146569.5 5 14 53.1 735.77 HUMAN 1 8.6873 2.4375 GSFSGRLSPAYSLGS-p Q86UU1;S539-p GSFSGRLSPAYSLGS 0.761380727443584 0.0855877834657853 -0.0433333333333333 -0.191333333333333 2.27108206856299 14.1297424163646 -0.0433333333333333 -0.191333333333333 0.592777612380103 0.0386389893477398 -0.568032037262327 -2.71512357202292 Q86UU1 PHLDB1 Q86UU1.S539.p_PHLDB1 Q86UU1_S539s _1_1_539_539 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22630.22630.5 23.47 23.47 1.126 9 1 1 0 668.1197 3256.604 S539s TMT10 532 (K) GSFSGRLsPAYSLGSLTGASPCQSPCVQR (K) GS(0.0)FS(0.0)GRLS(0.99)PAY(0.0)S(0.0)LGS(0.0)LT(0.0)GAS(0.0)PCQS(0.0)PCVQR C:Carbamidomethylation,s:Phosphorylated S PHLDB1 152129.1 6 15 99.1 600.41 HUMAN 1 -2.2711 -14.1297 GSGAEEESQTKSKQQ-p P49069;S61-p GSGAEEESQTKSKQQ 0.465533819815265 0.342239658937183 -0.158 -0.138 6.12866177667492 6.16825900323473 -0.158 -0.138 0.243856211457685 0.241642933685474 -1.30745136912018 -1.3141617734896 P49069 CAMLG P49069.S61.p_CAMLG P49069_S61s _1_1_61_61 P49069 P49069 Calcium signal-modulating cyclophilin ligand HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12771.12771.4 11.67 11.67 1.425 3 1 1 0 625.5582 2419.244 S61s TMT10 47 (R) IMGFHRPGSGAEEEsQTK (S) IMGFHRPGS(0.0)GAEEES(0.99)QT(0.0)K K:TMT10,s:Phosphorylated S CAMLG 33237.2 1 2 4719.1 27.52 HUMAN 1 -6.1287 -6.1683 GSGCRSPSLGSDLTF-p Q13425;S395-p GSGCRSPSLGSDLTF 0.0732853965819104 0.115548624340071 -0.438666666666667 -0.203666666666667 24.4215850254018 12.3644359180208 -0.438666666666667 -0.203666666666667 0.00361277984544174 0.0580171523019249 -4.89875800807219 -2.39590878283046 Q13425 SNTB2 Q13425.S395.p_SNTB2 Q13425_S395s _1_1_395_395 Q13425 Q13425 Beta-2-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21583.21583.2 8.3 4.47 1.251 5 1 1 0 830.9111 1580.8482 S395s TMT10 393 (R) SPsLGSDLTFATR (T) S(0.0)PS(0.99)LGS(0.0)DLT(0.0)FAT(0.0)R s:Phosphorylated S SNTB2 58405 1 11 637.1 255.93 HUMAN 1 -24.4216 -12.3644 GSGDAVPSGNEVSEN-p P49321-3;S753-p GSGDAVPSGNEVSEN 0.375644567259488 0.129188319525661 0.123 0.235 7.86303633637831 11.7124954604287 0.123 0.235 0.163567255372435 0.0674140554551695 1.61139177019679 2.28033482086373 P49321 NASP P49321.3.S753.p_NASP P49321-3_S753s _1_1_753_753 P49321-3 P49321-3|P49321-4|P49321-2|Q5T624 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16725.16725.4 28.23 25.45 1.715 4 1 1 0 1078.9861 4232.9526 S753s TMT10 737 (K) AKQEPEVNGGSGDAVPsGNEVSENMEEEAENQAESR (A) AKQEPEVNGGS(0.0)GDAVPS(0.99)GNEVS(0.0)ENMEEEAENQAES(0.0)R K:TMT10,s:Phosphorylated S NASP 86552 9 28 87.1 626.46 HUMAN 1 7.863 11.7125 GSGDSQLSASSRSES-p Q12789;S754-p GSGDSQLSASSRSES 0.652695631517557 0.579068158056048 -0.0936666666666667 0.136333333333333 3.4745371823987 3.2022362355552 -0.0936666666666667 0.136333333333333 0.449310204070019 0.478383703257339 -0.815252728229583 0.761086750761419 Q12789 GTF3C1 Q12789.S754.p_GTF3C1 Q12789_S754s _1_1_754_754 Q12789 Q12789|Q12789-3 General transcription factor 3C polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6173.6173.2 16.72 12.47 2.347 6 1 1 0 915.9087 1750.8405 S754s TMT10 743 (K) EGPSGSGDSQLsASSR (S) EGPS(0.0)GS(0.0)GDS(0.0)QLS(0.99)AS(0.0)S(0.0)R s:Phosphorylated S GTF3C1 241209.8 2 4 225.1 425.73 HUMAN 1 -3.4745 3.2022 GSGGGEESEGEEVDE-p Q96QR8;S304-p GSGGGEESEGEEVDE 0.752880589938391 0.560112108531054 -0.0536666666666667 0.207333333333333 2.35228173687137 3.39341365911742 -0.0536666666666667 0.207333333333333 0.581797467276994 0.457781917659552 -0.585477412651167 0.799125590704254 Q96QR8 PURB Q96QR8.S304.p_PURB Q96QR8_S304s _1_1_304_304 Q96QR8 Q96QR8 Transcriptional activator protein Pur-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4035.4035.2 11.98 11.98 2.771 2 1 1 0 1080.9265 2080.874 S304s TMT10 294 (R) RGGGSGGGEEsEGEEVDED (-) RGGGS(0.0)GGGEES(0.99)EGEEVDED s:Phosphorylated S PURB 33411.4 3 3 2346.1 87.14 HUMAN 1 -2.3523 3.3934 GSGGGGISPKGSGPS-p Q96EP1;S214-p GSGGGGISPKGSGPS 0.00861592953244037 0.000952253650599092 1.40766666666667 1.492 53.2407405112613 53.4708879960677 1.40766666666667 1.492 4.74161129618002e-06 4.4968789841462e-06 18.1093548185633 18.2284417964522 Q96EP1 CHFR Q96EP1.S214.p_CHFR Q96EP1_S214s _1_1_214_214 Q96EP1 Q96EP1|Q96EP1-4|Q96EP1-2 E3 ubiquitin-protein ligase CHFR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7227.7227.3 14.34 14.34 6.804 5 1 1 0 592.6179 1695.8736 S214s TMT10 203 (R) SSSCGSGGGGIsPK (G) S(0.0)S(0.0)S(0.0)CGS(0.0)GGGGIS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CHFR 75439.2 2 4 3382.1 52.35 HUMAN 1 53.2407 53.4709 GSGGGLFSGGKGLFD-p Q641Q2;S362-p GSGGGLFSGGKGLFD 0.323241986848319 0.208198221718993 -0.19 0.185 9.18034176215479 8.96658820180688 -0.19 0.185 0.120771879157417 0.126864811881758 -1.83958549721657 1.80193342632628 Q641Q2 FAM21A Q641Q2.S362.p_FAM21A Q641Q2_S362s _1_1_362_362 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2|Q9Y4E1-4|Q9Y4E1-2|E7ESD2|Q9Y4E1-6 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32381.32381.3 9.18 9.18 1.147 4 1 1 0 838.4037 2433.2338 S362s TMT10 346 (K) LTDEDFSPFGSGGGLFsGGK (G) LT(0.0)DEDFS(0.0)PFGS(0.0)GGGLFS(0.99)GGK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 1 26 12.1 1178.3 HUMAN 1 -9.1803 8.9666 GSGGGQQSVNHLVKE-p Q53EL6;S323-p GSGGGQQSVNHLVKE 0.92503534198716 0.00172752646433129 -0.0196666666666667 0.908666666666667 0.666384397848907 43.7373474569566 -0.0196666666666667 0.908666666666667 0.857751646173513 4.22926846684067e-05 -0.187965195790122 11.9471998056338 Q53EL6 PDCD4 Q53EL6.S323.p_PDCD4 Q53EL6_S323s _1_1_323_323 Q53EL6 Q53EL6|Q53EL6-2 Programmed cell death protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12033.12033.5 18.26 18.26 18.256 3 1 1 0 582.119 2826.5942 S323s TMT10 310 (K) RKDSVWGSGGGQQsVNHLVK (E) RKDS(0.0)VWGS(0.0)GGGQQS(0.99)VNHLVK K:TMT10,s:Phosphorylated S PDCD4 52133.7 1 11 476.1 301.17 HUMAN 1 -0.6664 43.7373 GSGGRRFSNVGLVHT-p A0A087X165;S45-p GSGGRRFSNVGLVHT 0.338781881422564 0.884156360373824 -0.138333333333333 0.0233333333333334 8.74428050404076 0.751873936544451 -0.138333333333333 0.0233333333333334 0.13352787869651 0.841032166509821 -1.76409753777969 0.210405556253711 A0A087X165 NotFound A0A087X165.S45.p_NotFound A0A087X165_S45s _1_1_45_45 A0A087X165 A0A087X165|Q9C0H9-5 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10834.10834.3 10.38 10.38 10.377 3 1 1 0 604.3114 1730.9499 S45s TMT10 43 (R) RFsNVGLVHTSER (R) RFS(0.99)NVGLVHT(0.0)S(0.0)ER s:Phosphorylated S SRCIN1 130745.5 1 2 98.1 603.22 HUMAN 1 -8.7443 0.7519 GSGGSELSNGEAGEA-p Q96PE2;S723-p GSGGSELSNGEAGEA 0.644065107744514 0.231867501672282 0.067 0.128333333333333 3.57360689742614 8.36145132463905 0.067 0.128333333333333 0.439176719399523 0.145832683539606 0.834693073453963 1.69724821680344 Q96PE2 ARHGEF17 Q96PE2.S723.p_ARHGEF17 Q96PE2_S723s_1_1_723_723 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10576.10576.3 18.73 18.73 4.744 5 1 1 0 896.7694 2607.3415 S723s N724n TMT10 711 (R) KVPPSGSGGSELsnGEAGEAYR (S) KVPPS(0.0)GS(0.0)GGS(0.0)ELS(0.99)N(1.0)GEAGEAY(0.0)R K:TMT10,s:Phosphorylated S,n:Deamidated ARHGEF17 223779.6 2 22 30.1 908.19 HUMAN 1 3.5736 8.3615 GSGGSGGYGGRSRY_-p P22626;Y347-p GSGGSGGYGGRSRY_ 0.744000442558004 0.0609165366349795 -0.0456666666666667 -0.315333333333333 2.4414974642019 16.1896109019818 -0.0456666666666667 -0.315333333333333 0.569967711319797 0.0240457822404508 -0.604497695168793 -3.10245826268463 P22626 HNRNPA2B1 P22626.Y347.p_HNRNPA2B1 P22626_Y347y _1_1_347_347 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12966.13012.3 32.67 32.67 1.862 5 1 1 0 833.6838 2419.0683 Y347y TMT10 326 (R) NMGGPYGGGNYGPGGSGGSGGyGGR (S) NMGGPY(0.0)GGGNY(0.0)GPGGS(0.0)GGS(0.0)GGY(0.99)GGR y:Phosphorylated Y HNRNPA2B1 37486.1 5 8 2.1 134.47 HUMAN 1 -2.4415 -16.1896 GSGLEAPSPDEDDCE-p O15156;S150-p GSGLEAPSPDEDDCE 0.805382713225986 0.170442824595739 0.0386666666666667 0.176666666666667 1.81159919904639 10.101599606229 0.0386666666666667 0.176666666666667 0.658931212859909 0.0976877348342634 0.466662941661583 1.99854998036168 O15156 ZBTB7B O15156.S150.p_ZBTB7B O15156_S150s _1_1_150_150 O15156 O15156-2 Zinc finger and BTB domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.37485.37485.4 26.63 26.63 4.09 2 1 1 0 974.9473 3816.8002 S150s TMT10 127 (R) LLEIPCVIAACMEILQGSGLEAPsPDEDDCER (A) LLEIPCVIAACMEILQGS(0.0)GLEAPS(0.99)PDEDDCER C:Carbamidomethylation,s:Phosphorylated S ZBTB7B 58938.8 12 2 701.1 240.09 HUMAN 1 1.8116 10.1016 GSGPEPHSPGGIRLP-p Q9H2S9;S148-p GSGPEPHSPGGIRLP 0.139107365012339 0.739517032152624 0.291333333333333 0.0333333333333334 17.5456620747782 1.80704552573114 0.291333333333333 0.0333333333333334 0.0175968038297898 0.659622479093062 3.37089261825823 0.465581612351379 Q9H2S9 IKZF4 Q9H2S9.S148.p_IKZF4 Q9H2S9_S148s _1_1_148_148 Q9H2S9 Q9H2S9|Q9H2S9-2|F8VPL6 Zinc finger protein Eos HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26979.26979.5 27.57 27.57 2.393 6 1 1 0 1001.1038 4921.5497 S148s TMT10 119 (R) LLEKDDSVIVEDSLSEPLGYCDGSGPEPHsPGGIRLPNGK (L) LLEKDDS(0.0)VIVEDS(0.0)LS(0.0)EPLGY(0.0)CDGS(0.0)GPEPHS(0.99)PGGIRLPNGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S IKZF4 65303 1 9 2223.1 92.84 HUMAN 1 17.5457 1.807 GSGPLGNSYVERQRS-p Q9UER7;S647-p GSGPLGNSYVERQRS 0.300713694225726 0.286466886825777 -0.323666666666667 -0.255333333333333 9.79963141542433 7.16269291039433 -0.323666666666667 -0.255333333333333 0.10472174213445 0.192189965563209 -1.94691969070986 -1.48904175658215 Q9UER7 DAXX Q9UER7.S647.p_DAXX Q9UER7_S647s _1_1_647_647 Q9UER7 Q9UER7|Q9UER7-2|Q9UER7-4|Q9UER7-3 Death domain-associated protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10313.10313.3 14.74 14.74 5.895 4 1 1 0 711.0369 2051.1286 S647s TMT10 637 (K) KQTGSGPLGNsYVER (Q) KQT(0.0)GS(0.0)GPLGNS(0.99)Y(0.0)VER K:TMT10,s:Phosphorylated S DAXX 82112.9 1 8 315.1 368.97 HUMAN 1 -9.7996 -7.1627 GSGQNEESPRKRKKA-p Q9NVF7;S344-p GSGQNEESPRKRKKA 1 0.00314471519776055 -1.38777878078145e-17 -0.745666666666667 4.82163733276644e-16 37.5669826445436 -1.20185167898973e-17 -0.745666666666667 1 0.000175106285513488 -1.54062543079851e-16 -9.08906974656996 Q9NVF7 FBXO28 Q9NVF7.S344.p_FBXO28 Q9NVF7_S344s _1_1_344_344 Q9NVF7 Q9NVF7 F-box only protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7387.7387.4 21.11 21.11 1.114 5 1 1 0 744.1071 2893.4474 S344s TMT10 326 (R) EVMESAVGNSSGSGQNEEsPRKR (K) EVMES(0.0)AVGNS(0.0)S(0.0)GS(0.0)GQNEES(0.99)PRKR K:TMT10,s:Phosphorylated S FBXO28 41433.7 21 3 1206.1 166.81 HUMAN 1 0 -37.567 GSGSRPPTPKSSPQK-p Q8IV63;T104-p GSGSRPPTPKSSPQK 0.730999736003967 0.130363505088089 -0.0593333333333333 -0.363666666666667 2.58235412484875 11.6610621256061 -0.0593333333333334 -0.363666666666667 0.551778262779293 0.0682171839434698 -0.634227666822301 -2.27126089800522 Q8IV63 VRK3 Q8IV63.T104.p_VRK3 Q8IV63_T104t _1_1_104_104 Q8IV63 Q8IV63|Q8IV63-2|M0QYA8 Inactive serine/threonine-protein kinase VRK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4382.4382.3 7.15 3.92 1.888 3 1 1 0 507.9449 1441.8527 T104t TMT10 97 (K) GSGSRPPtPK (S) GS(0.0)GS(0.0)RPPT(0.99)PK K:TMT10,t:Phosphorylated T VRK3 53622 2 4 387.2 332.82 HUMAN 1 -2.5824 -11.6611 GSGSRRDSLTGSSDL-p Q5T1Z8;S745-p GSGSRRDSLTGSSDL 0.560899556742354 0.800481232979563 -0.091 0.0303333333333334 4.62675664627695 1.35159313572173 -0.091 0.0303333333333334 0.344607190714158 0.732555758176395 -1.03519259670083 0.359849101829391 Q5T1Z8 NotFound Q5T1Z8.S745.p_NotFound Q5T1Z8_S745s _1_1_745_745 Q5T1Z8 Q5T1Z8|Q5T1Z4|Q14671-3|Q14671-2|Q14671-4|E9PR38 Pumilio homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10275.10275.2 12.84 9.69 2.256 5 1 1 0 825.9005 1570.8274 S745s Hydrogen 743 (R) RDsLTGSSDLYK (R) RDS(0.99)LT(0.0)GS(0.0)S(0.0)DLY(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S PUM1 130847.9 21 11 720.1 237.18 HUMAN 1 -4.6268 1.3516 GSGTSPESGDEEVSG-p Q9BQ61;S39-p GSGTSPESGDEEVSG 0.676703619740907 0.392453168104311 -0.0603333333333333 -0.141 3.17674765980869 5.40129336901069 -0.0603333333333333 -0.141 0.481199573807938 0.288317273983328 -0.756088697071826 -1.17686098331816 Q9BQ61 C19orf43 Q9BQ61.S39.p_C19orf43 Q9BQ61_S39s _1_1_39_39 Q9BQ61 Q9BQ61|K7EN60|K7ERU7|K7ELS0 Telomerase RNA component interacting RNase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36479.36479.4 33.28 33.28 2.212 10 1 1 0 1239.8365 4876.359 S39s TMT10 28 (R) WAESGSGTSPEsGDEEVSGAGSSPVSGGVNLFANDGSFLELFKR (K) WAES(0.0)GS(0.0)GT(0.0)S(0.0)PES(0.99)GDEEVS(0.0)GAGS(0.0)S(0.0)PVS(0.0)GGVNLFANDGS(0.0)FLELFKR K:TMT10,s:Phosphorylated S TRIR 18476.2 15 1 3023.1 63.01 HUMAN 1 -3.1767 -5.4013 GSGVSLASKKSRLSS-p Q09666;S5857-p GSGVSLASKKSRLSS 0.126203683087079 0.0277238968700976 -0.639666666666667 0.692333333333333 18.6742537659961 21.1112028733201 -0.639666666666667 0.692333333333334 0.0135698367633577 0.00774247323413801 -3.6000300421507 4.11746031951266 Q09666 AHNAK Q09666.S5857.p_AHNAK Q09666_S5857s _1_1_5857_5857 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16906.16906.3 13.32 13.32 4.179 3 1 1 0 528.9641 1504.9099 S5857s TMT10 5848 (K) LQGSGVSLAsK (K) LQGS(0.0)GVS(0.0)LAS(0.99)K K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 167 1.1 4313.36 HUMAN 1 -18.6743 21.1112 GSGYHSRSPARQESS-p Q9UQ35;S1824-p GSGYHSRSPARQESS 0.197761745178558 0.00799083510313379 0.237333333333333 0.461666666666667 13.7199792777361 29.9023439356583 0.237333333333333 0.461666666666667 0.042462159001388 0.0010227408586727 2.64164859799232 6.39237750825253 Q9UQ35 SRRM2 Q9UQ35.S1824.p_SRRM2 Q9UQ35_S1824s _1_1_1824_1824 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3253.3253.3 10.7 3.69 6.15 3 1 1 0 442.8833 1246.6701 S1824s TMT10 1824 (R) sPARQESSR (T) S(0.99)PARQES(0.0)S(0.0)R s:Phosphorylated S SRRM2 300351.7 4 116 2.1 3310.34 HUMAN 1 13.72 29.9023 GSHKRSASWGSTDQL-p Q6P1L5;S273-p GSHKRSASWGSTDQL 0.74680279001455 0.00593909392828346 -0.0846666666666667 -1.015 2.40750098352967 32.1661034712641 -0.0846666666666667 -1.015 0.574446915256802 0.000607280943101771 -0.597267661364047 -7.1068639390781 Q6P1L5 FAM117B Q6P1L5.S273.p_FAM117B Q6P1L5_S273s _1_1_273_273 Q6P1L5 Q6P1L5|Q6P1L5-2 Protein FAM117B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16161.16161.2 12.63 12.63 3.195 4 1 1 0 859.4329 1637.8899 S273s TMT10 271 (R) SAsWGSTDQLK (E) S(0.0)AS(0.99)WGS(0.0)T(0.0)DQLK K:TMT10,s:Phosphorylated S FAM117B 62537.3 2 7 492.1 293.79 HUMAN 1 -2.4075 -32.1661 GSHKRSLSLGDKEIS-p Q9UMZ2;S1075-p GSHKRSLSLGDKEIS 0.0360961121648541 0.00225192113407965 -0.660333333333333 -1.071 33.0684267927074 40.9999770433608 -0.660333333333333 -1.071 0.000493352485748161 7.94332433523866e-05 -7.422818541996 -10.5904123521834 Q9UMZ2 SYNRG Q9UMZ2.S1075.p_SYNRG Q9UMZ2_S1075s _1_1_1075_1075 Q9UMZ2 Q9UMZ2|Q9UMZ2-5|Q9UMZ2-7|Q9UMZ2-3|Q9UMZ2-8|Q9UMZ2-4|Q9UMZ2-9|Q9UMZ2-6 Synergin gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15651.15651.2 10.68 10.68 2.308 3 1 1 0 871.9766 1662.9791 S1075s TMT10 1073 (R) SLsLGDKEISR (S) S(0.0)LS(0.99)LGDKEIS(0.0)R K:TMT10,s:Phosphorylated S SYNRG 141393.5 7 15 236.1 418.49 HUMAN 1 -33.0684 -41 GSHPKVQSPKPITGG-p Q9ULM3;S575-p GSHPKVQSPKPITGG 0.321360955335002 0.772997641235629 -0.155666666666667 -0.033 9.22776105139486 1.54719049359023 -0.155666666666667 -0.033 0.119460380816711 0.700294879190079 -1.84779679854975 -0.405969687607808 Q9ULM3 YEATS2 Q9ULM3.S575.p_YEATS2 Q9ULM3_S575s _1_1_575_575 Q9ULM3 Q9ULM3 YEATS domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21988.21988.4 17.15 17.15 2.194 3 1 1 0 592.8463 2288.3945 S575s TMT10 573 (K) VQsPKPITGGLGAFTK (V) VQS(0.99)PKPIT(0.0)GGLGAFT(0.0)K K:TMT10,s:Phosphorylated S YEATS2 151691.8 4 10 1060.1 182.14 HUMAN 1 -9.2278 -1.5472 GSHRKDPSLPAASSS-p Q01831;S496-p GSHRKDPSLPAASSS 0.300478673172259 0.182226479816974 0.144666666666667 -0.134 9.81042171192466 9.72633390907447 0.144666666666667 -0.134548725772417 0.104461877893014 0.106504169235074 1.94879227641662 -1.93344420357574 Q01831 XPC Q01831.S496.p_XPC Q01831_S496s _1_1_496_496 Q01831 Q01831|Q01831-2 DNA repair protein complementing XP-C cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9909.9909.3 16.79 16.79 4.458 8 1 1 0 768.4081 2223.2436 S496s TMT10 493 (R) KDPsLPAASSSSSSSK (R) KDPS(0.99)LPAAS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S XPC 106806.6 1 6 780.1 226.3 HUMAN 1 9.8104 -9.7263 GSHRRGQSPLPRQRF-p Q9BQ65;S36-p GSHRRGQSPLPRQRF 0.738786253352318 0.110297147501293 0.0533333333333333 -0.169333333333333 2.49486258001525 12.6419450186166 0.0533333333333333 -0.169333333333333 0.563006931845768 0.0544258848069263 0.615803523991254 -2.44544528459366 Q9BQ65 USB1 Q9BQ65.S36.p_USB1 Q9BQ65_S36s _1_1_36_36 Q9BQ65 Q9BQ65|Q9BQ65-2|Q9BQ65-3|H3BN52 U6 snRNA phosphodiesterase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6917.6917.2 8.07 1.96 99 1 1 1 0 532.2788 983.5835 S36s TMT10 34 (R) GQsPLPR (Q) GQS(1.0)PLPR s:Phosphorylated S USB1 30438.9 2 1 5823.1 16 HUMAN 1 2.4949 -12.6419 GSHSQSRSPGRPTQG-p P10071;S664-p GSHSQSRSPGRPTQG 0.681665097089741 0.927173510161095 -0.067 0.0123333333333334 3.12119867594751 0.463865469209486 -0.067 0.0123333333333333 0.487393948206268 0.898697333437183 -0.74492342277237 0.133388254133171 P10071 GLI3 P10071.S664.p_GLI3 P10071_S664s _1_1_664_664 P10071 P10071 Transcriptional activator GLI3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9442.9442.3 18.32 18.32 1.222 6 1 1 0 861.0863 2501.2793 S664s Hydrogen 664 (R) sPGRPTQGALGEQQDLSNTTSK (R) S(0.99)PGRPT(0.0)QGALGEQQDLS(0.0)NT(0.0)T(0.0)S(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S GLI3 171514.7 4 2 1965.1 105.02 HUMAN 1 -3.1212 0.4639 GSIATVKSPRPASPA-p Q7Z589-4;S183-p GSIATVKSPRPASPA 0.123350251698765 0.0273588124414629 -0.273333333333333 0.304666666666667 18.9134819957199 21.2016724922185 -0.273333333333333 0.304666666666667 0.0128425658260367 0.00758285498827208 -3.64955417797581 4.13754850405888 Q7Z589 C11orf30 Q7Z589.4.S183.p_C11orf30 Q7Z589-4_S183sS188s_2_2_183_188 Q7Z589-4 Q7Z589-7|Q7Z589-4|Q7Z589-5|Q7Z589-6|E9PMC9|Q7Z589-2 Isoform 4 of BRCA2-interacting transcriptional repressor EMSY HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24107.24107.4 14.98 14.98 1.172 7 2 2 0 733.3856 2770.5867 S183s S188s TMT10 183 (K) sPRPAsPASNVVVLPSGSTVYVK (S) S(0.99)PRPAS(0.99)PAS(0.0)NVVVLPS(0.0)GS(0.0)T(0.0)VY(0.0)VK K:TMT10,s:Phosphorylated S EMSY 142030.9 2 12 879.1 207.7 HUMAN 1 -18.9135 21.2017 GSIGAADSPENWEKV-p Q96FZ2;S160-p GSIGAADSPENWEKV 0.732783197794934 0.0304698237240543 -0.0473333333333333 0.289333333333333 2.55456770982007 20.4920829100155 -0.0473333333333333 0.289333333333333 0.555319890073291 0.0089287715021981 -0.628391129774528 3.98151833870946 Q96FZ2 HMCES Q96FZ2.S160.p_HMCES Q96FZ2_S160s _1_1_160_160 Q96FZ2 Q96FZ2|E7EMP6 Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16586.16586.2 17.12 17.12 8.369 3 1 1 0 1043.5024 2006.0231 S160s TMT10 152 (K) SGSIGAADsPENWEK (V) S(0.0)GS(0.0)IGAADS(0.99)PENWEK K:TMT10,s:Phosphorylated S HMCES 41144.7 2 2 1621.1 126.89 HUMAN 1 -2.5546 20.4921 GSIKRTKSQPKLDRN-p Q5VWQ8;S92-p GSIKRTKSQPKLDRN 0.351928236415973 0.43499406711115 -0.277666666666667 -0.0736666666666666 8.42291959149668 4.81746313708376 -0.277666666666667 -0.0736666666666667 0.14378316554416 0.329802304751668 -1.70845843946182 -1.07028895077099 Q5VWQ8 DAB2IP Q5VWQ8.S92.p_DAB2IP Q5VWQ8_S92s _1_1_92_92 Q5VWQ8 Q96PV0-4|Q96PV0-2|Q96PV0-3|Q5VWQ8|Q5VWQ8-5|A0A1B0GW70 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5426.5426.3 10.54 10.54 99 1 1 1 0 461.2589 1301.7942 S92s TMT10 92 (K) sQPKLDR (N) S(1.0)QPKLDR K:TMT10,s:Phosphorylated S DAB2IP 132592.9 1 2 281.1 388.28 HUMAN 1 -8.4229 -4.8175 GSILNRESPTDKKQK-p Q9NZN5;S28-p GSILNRESPTDKKQK 0.463027173759312 0.112102638604981 0.104 -0.196 6.17128396370314 12.542974391934 0.104 -0.196 0.241474682453622 0.0556804274730722 1.31501956689099 -2.42775377945083 Q9NZN5 ARHGEF12 Q9NZN5.S28.p_ARHGEF12 Q9NZN5_S28s _1_1_28_28 Q9NZN5 Q9NZN5|Q9NZN5-2 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7054.7054.5 8.02 8.02 2.53 3 1 1 0 470.6646 2269.3231 S28s TMT10 20 (R) HGSILNREsPTDKK (Q) HGS(0.0)ILNRES(0.99)PT(0.0)DKK K:TMT10,s:Phosphorylated S ARHGEF12 174199.1 4 1 251.1 406.16 HUMAN 1 6.1713 -12.543 GSILSDISFDKTDES-p Q9H0H5;S157-p GSILSDISFDKTDES 0.267768114255681 0.110780589782491 -0.280333333333333 -0.227666666666667 10.8444538866315 12.6152870352646 -0.280333333333333 -0.227666666666667 0.0823293357288293 0.0547609906960932 -2.1288806822217 -2.44067727443787 Q9H0H5 RACGAP1 Q9H0H5.S157.p_RACGAP1 Q9H0H5_S154sS157s_2_2_154_157 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33153.33153.4 20.84 20.84 1.225 10 2 2 0 1102.2926 4246.2222 S154s S157s TMT10 142 (K) RLSTIDESGSILsDIsFDKTDESLDWDSSLVK (T) RLS(0.0)T(0.0)IDES(0.0)GS(0.0)ILS(0.99)DIS(0.99)FDKT(0.0)DES(0.0)LDWDS(0.0)S(0.0)LVK K:TMT10,s:Phosphorylated S RACGAP1 71709.9 3 18 574.1 268.64 HUMAN 1 -10.8445 -12.6153 GSINLLESPQLATLA-p P11137;S1808-p GSINLLESPQLATLA 0.579155186479739 0.063401750134034 -0.0906666666666667 -0.283666666666667 4.36237101942402 15.9496306829737 -0.0906666666666667 -0.283666666666667 0.366237573607382 0.0254118879495976 -0.985793807795387 -3.05637361012413 P11137 MAP2 P11137.S1808.p_MAP2 P11137_S1808s _1_1_1808_1808 P11137 P11137|P11137-3|P11137-4|P11137-2 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36918.36918.4 11.77 7.6 1.181 8 1 1 0 949.2633 3714.0689 S1808s TMT10 1793 (R) RLSNVSSSGSINLLEsPQLATLAEDVTAALAK (Q) RLS(0.0)NVS(0.0)S(0.0)S(0.0)GS(0.0)INLLES(0.99)PQLAT(0.0)LAEDVT(0.0)AALAK K:TMT10,s:Phosphorylated S MAP2 199979.2 2 24 117.1 560.28 HUMAN 1 -4.3624 -15.9496 GSIRPSISNPRIPWS-p Q92805;S760-p GSIRPSISNPRIPWS 0.37375663443391 0.240505705960235 0.142 0.429666666666667 7.91585457344204 8.15450846536555 0.142 0.429666666666667 0.161590022959734 0.152949884535149 1.62056016122288 1.66141618702644 Q92805 GOLGA1 Q92805.S760.p_GOLGA1 Q92805_S760s _1_1_760_760 Q92805 Q92805 Golgin subfamily A member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7758.7758.3 8.75 8.75 1.505 3 1 1 0 498.266 1412.8171 S760s TMT10 753 (K) GSIRPSIsNPR (I) GS(0.0)IRPS(0.0)IS(0.99)NPR s:Phosphorylated S GOLGA1 88297 2 4 1691.1 120.73 HUMAN 1 7.9159 8.1545 GSISRQSSLSEKKIP-p Q7Z4S6-5;S1209-p GSISRQSSLSEKKIP 0.254817231021932 0.148935210446001 0.205666666666667 -0.148666666666667 11.2983549522317 10.8861444919359 0.205666666666667 -0.148666666666667 0.074159109261293 0.0815427869918679 2.20846345925558 -2.13522334654645 Q7Z4S6 KIF21A Q7Z4S6.5.S1209.p_KIF21A Q7Z4S6-5_S1209s _1_1_1209_1209 Q7Z4S6-5 Q7Z4S6-4|Q7Z4S6-2|Q7Z4S6-5|Q7Z4S6-3|Q7Z4S6-6 Isoform 5 of Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7153.7153.2 9.9 2.68 1.336 3 1 1 0 658.8469 1236.72 S1209s TMT10 1207 (R) QSsLSEK (K) QS(0.0)S(0.99)LS(0.0)EK K:TMT10,s:Phosphorylated S KIF21A 184163.5 3 16 390.1 332.37 HUMAN 1 11.2984 -10.8861 GSISTPNSPVKMTLI-p Q96AY4;S2108-p GSISTPNSPVKMTLI 0.496460521143935 0.0603984147486401 -0.0913333333333333 -0.282 5.60075047078878 16.2376966933607 -0.0913333333333334 -0.282 0.275375280744368 0.0237810119235564 -1.21309883872784 -3.1117252530758 Q96AY4 TTC28 Q96AY4.S2108.p_TTC28 Q96AY4_S2108s _1_1_2108_2108 Q96AY4 Q96AY4|A0A087WW06 Tetratricopeptide repeat protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11009.11009.2 11.24 7.04 1.828 4 1 1 0 812.9377 1544.9048 S2108s TMT10 2101 (K) GSISTPNsPVK (M) GS(0.0)IS(0.0)T(0.0)PNS(0.99)PVK K:TMT10,s:Phosphorylated S TTC28 272819.5 2 4 1011.1 188.93 HUMAN 1 -5.6008 -16.2377 GSKALEYSNGIFDCQ-p Q86W92-2;S29-p GSKALEYSNGIFDCQ 0.765963295929894 0.801366684110004 0.046 -0.0316666666666667 2.22377922305451 1.34481733410636 0.046 -0.0316666666666667 0.599269366129031 0.733699573449585 0.557808398694263 -0.358230656857282 Q86W92 PPFIBP1 Q86W92.2.S29.p_PPFIBP1 Q86W92-2_S29s_1_1_29_29 Q86W92-2 Q86W92|Q86W92-2|Q86W92-4|A0A0A0MTP2|Q86W92-5|F5H0E0 Isoform 2 of Liprin-beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.31602.31602.3 19.65 19.65 1.407 6 1 1 0 963.0987 2806.3378 S29s N30n TMT10 25 (K) ALEYsnGIFDCQSPTSPFMGSLR (A) ALEY(0.0)S(0.99)N(1.0)GIFDCQS(0.0)PT(0.0)S(0.0)PFMGS(0.0)LR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated PPFIBP1 113749.6 2 2 449.1 309.07 HUMAN 1 2.2238 -1.3448 GSKHFVRSPKAQGKS-p Q969G9;S348-p GSKHFVRSPKAQGKS 0.211891167674478 0.698685612472001 0.657 -0.205 13.0109400217521 2.13965836663668 0.657 -0.205 0.0499926315210674 0.610990085932588 2.51303844299163 -0.539448693810631 Q969G9 NKD1 Q969G9.S348.p_NKD1 Q969G9_S348s _1_1_348_348 Q969G9 Q969G9 Protein naked cuticle homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19568.19568.2 7.07 2.27 99 1 1 1 0 704.8939 1328.8203 S348s TMT10 344 (K) HFVRsPK (A) HFVRS(1.0)PK K:TMT10,s:Phosphorylated S NKD1 52682.9 1 1 6203.1 13.21 HUMAN 1 13.0109 -2.1397 GSKQRSASQSSLDKL-p O60271;S730-p GSKQRSASQSSLDKL 0.575409635746733 0.971145786535461 -0.0933333333333334 -0.00499999999999997 4.41347171985618 0.180803291332734 -0.0933333333333334 -0.00499999999999996 0.361953539596511 0.959223192710168 -0.99538498778774 -0.053534505249293 O60271 SPAG9 O60271.S730.p_SPAG9 O60271_S730s _1_1_730_730 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-9|O60271-3|O60271-5 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20116.20116.3 17.13 17.13 2.143 4 1 1 0 806.1023 2336.3276 S730s TMT10 728 (R) SAsQSSLDKLDQELK (E) S(0.0)AS(0.99)QS(0.0)S(0.0)LDKLDQELK K:TMT10,s:Phosphorylated S SPAG9 147001.6 13 34 84.1 629.25 HUMAN 1 -4.4135 -0.1808 GSKRQLQTPKEKAQA-p P46013;T1213-p GSKRQLQTPKEKAQA 0.0866557243462627 0.253581744250682 -0.616666666666667 -0.264333333333333 22.6859003291892 7.84803540626318 -0.616666666666667 -0.264333333333333 0.00538778140530044 0.16413320855345 -4.48056455050545 -1.60828770741264 P46013 MKI67 P46013.T1213.p_MKI67 P46013_T1213t _1_1_1213_1213 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8216.8216.3 8.96 4.01 99 1 1 1 0 580.3409 1659.0408 T1213t TMT10 1210 (R) QLQtPKEK (A) QLQT(1.0)PKEK K:TMT10,t:Phosphorylated T MKI67 360912.4 3 33 5.1 1918.46 HUMAN 1 -22.6859 -7.848 GSKRQPQTPKEKAEA-p P46013;T2426-p GSKRQPQTPKEKAEA 0.555065168519058 0.257425557659873 0.106333333333333 -0.232 4.72152580694665 7.76458616697709 0.106333333333333 -0.232 0.337168830311302 0.167317506327017 1.05276995237297 -1.59380455692737 P46013 MKI67 P46013.T2426.p_MKI67 P46013_T2426t _1_1_2426_2426 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.4218.4218.4 10.78 7.73 99 1 1 1 0 470.5242 1799.1106 T2426t TMT10 2422 (K) RQPQtPKEK (A) RQPQT(1.0)PKEK K:TMT10,t:Phosphorylated T MKI67 360912.4 5 85 5.1 1918.46 HUMAN 1 4.7215 -7.7646 GSKRRPQTPKEEAQA-p P46013;T1335-p GSKRRPQTPKEEAQA 0.945731226553801 0.119009179462969 -0.0123333333333333 -0.183 0.476348457197888 12.190802825624 -0.0123333333333333 -0.183 0.896117903746529 0.0603836995302561 -0.136822234230572 -2.36502190116238 P46013 MKI67 P46013.T1335.p_MKI67 P46013_T1335t _1_1_1335_1335 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22832.22844.4 19.09 19.09 9.308 2 1 1 0 674.8549 2616.4397 T1335t Hydrogen 1332 (R) RPQtPKEEAQALEDLTGFK (E) RPQT(0.99)PKEEAQALEDLT(0.0)GFK K:TMT10-Lys-Only,t:Phosphorylated T MKI67 360912.4 5 41 5.1 1918.46 HUMAN 1 -0.4763 -12.1908 GSKSPVISRRDSPRK-p Q8N8S7;S512-p GSKSPVISRRDSPRK 0.402824653779142 0.00686971325246239 0.115 0.732 7.29061663756902 31.0299145184135 0.115 0.732 0.186611470977163 0.000788875644796723 1.51179433669671 6.74053133980482 Q8N8S7 ENAH Q8N8S7.S512.p_ENAH Q8N8S7_S512s_1_1_512_512 Q8N8S7 Q8N8S7 Protein enabled homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8086.8086.3 8.92 8.92 0 5 1 1 0 729.7159 2106.1854 N504n S512s TMT10 500 (R) TNTMnGSKSPVIsRR (D) T(0.0)N(0.50)T(0.0)MN(0.50)GS(0.0)KS(0.0)PVIS(0.99)RR K:TMT10,n:Deamidated,s:Phosphorylated S ENAH 66623.2 1 15 794.1 224.28 HUMAN 1 7.2906 31.0299 GSKSQRYSGAYGASV-p F8WAR4;S50-p GSKSQRYSGAYGASV 0.5088459632914 0.0549350907862547 0.107666666666667 -0.226 5.41655739278185 16.7922838663588 0.107666666666667 -0.226 0.287305712212925 0.0209301149420994 1.17987631526157 -3.21941874002446 F8WAR4 NotFound F8WAR4.S50.p_NotFound F8WAR4_S50s _1_1_50_50 F8WAR4 F8WAR4|C9JRZ6|Q9NX63 MICOS complex subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13322.13322.3 19.13 19.13 1.266 6 1 1 0 829.0731 2405.2349 S50s TMT10 46 (K) SQRYsGAYGASVSDEELK (R) S(0.0)QRY(0.0)S(0.99)GAY(0.0)GAS(0.0)VS(0.0)DEELK K:TMT10,s:Phosphorylated S CHCHD3 27848.9 12 2 2722.1 72.89 HUMAN 1 5.4166 -16.7923 GSKSVPNTPLRPNQQ-p Q15643;T1846-p GSKSVPNTPLRPNQQ 0.614858955839297 0.0154604915090575 -0.071 -0.358333333333333 3.92091150962544 25.0433258679698 -0.071 -0.358333333333333 0.405423435093117 0.00313088714319757 -0.901981288679978 -5.04844293160846 Q15643 TRIP11 Q15643.T1846.p_TRIP11 Q15643_T1846t _1_1_1846_1846 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27807.28505.5 22.28 19.81 3.42 6 1 1 0 663.3532 3232.773 T1846t TMT10 1842 (K) SVPNtPLRPNQQSVVNSSFSELFVK (F) S(0.0)VPNT(0.99)PLRPNQQS(0.0)VVNS(0.0)S(0.0)FS(0.0)ELFVK K:TMT10,t:Phosphorylated T TRIP11 228267 14 15 463.1 303.86 HUMAN 1 -3.9209 -25.0433 GSKTPPASPHRVSDL-p Q5T5P2;S474-p GSKTPPASPHRVSDL 0.337362550356468 0.682006042197624 0.262333333333333 0.0516666666666667 8.7910342074573 2.2744583607594 0.262333333333333 0.0516666666666667 0.132098102482289 0.592316954289493 1.77219062326188 0.568690534974816 Q5T5P2 KIAA1217 Q5T5P2.S474.p_KIAA1217 Q5T5P2_S474s _1_1_474_474 Q5T5P2 Q5T5P2|Q5T5P2-3|Q5T5P2-10|Q5T5P2-7 Sickle tail protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6031.6031.3 8.82 3.75 1.576 3 1 1 0 581.3044 1661.9285 S474s TMT10 470 (K) TPPAsPHRVSDLR (M) T(0.0)PPAS(0.99)PHRVS(0.0)DLR s:Phosphorylated S KIAA1217 214739.6 2 6 303.1 376.04 HUMAN 1 8.791 2.2745 GSKWDSESNSERDVT-p P30414;S889-p GSKWDSESNSERDVT 0.726935837841591 0.109171093703637 -0.0626666666666667 0.292666666666667 2.62590651702099 12.7081964438287 -0.0626666666666667 0.292666666666667 0.546272512739306 0.0536019211584133 -0.643348690451559 2.45730383628422 P30414 NKTR P30414.S889.p_NKTR P30414_S889s _1_1_889_889 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11564.11858.4 15.68 15.68 1.12 6 1 1 0 735.864 2860.468 S889s TMT10 879 (K) NYAGSKWDSEsNSERDVTK (N) NY(0.0)AGS(0.0)KWDS(0.0)ES(0.99)NS(0.0)ERDVT(0.0)K K:TMT10,s:Phosphorylated S NKTR 166700.6 2 18 202.1 449.45 HUMAN 1 -2.6259 12.7082 GSLAPQDSDSEVSQN-p P26045;S425-p GSLAPQDSDSEVSQN 0.257724149587971 0.074615957147091 0.163 0.203666666666667 11.1886607313727 14.9616442169344 0.163 0.203666666666667 0.0760560780991133 0.031903297837164 2.18919458879654 2.86939407554676 P26045 PTPN3 P26045.S425.p_PTPN3 P26045_S425s _1_1_425_425 P26045 P26045|J3KN34|P26045-2|P26045-3 Tyrosine-protein phosphatase non-receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8589.8589.3 14.67 11.77 2.21 4 1 1 0 666.9691 1918.9304 S425s TMT10 418 (K) GSLAPQDsDSEVSQNR (S) GS(0.0)LAPQDS(0.99)DS(0.0)EVS(0.0)QNR s:Phosphorylated S PTPN3 105129.1 3 5 1253.1 161.68 HUMAN 1 11.1887 14.9616 GSLASLDSLRKGGPP-p O60716-3;S352-p GSLASLDSLRKGGPP 0.343164410890753 0.376810015444108 0.256 0.092 8.62564385354603 5.62898274081998 0.256 0.0920000000000001 0.137225750496707 0.273590949040492 1.74356029118457 1.21790296399093 O60716 CTNND1 O60716.3.S352.p_CTNND1 O60716-3_S352s _1_1_352_352 O60716-3 O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-24|O60716-25|O60716-26|O60716-28 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18399.18399.2 10.23 7.1 2.627 3 1 1 0 664.3457 1247.7157 S352s TMT10 345 (R) GSLASLDsLR (K) GS(0.0)LAS(0.0)LDS(0.99)LR s:Phosphorylated S CTNND1 105545.3 2 25 21.1 1014.17 HUMAN 1 8.6256 5.629 GSLAVQNSPKGCHRD-p P18615-3;S360-p GSLAVQNSPKGCHRD 0.681920528763249 0.200486612190055 -0.0643333333333333 -0.140333333333333 3.11846725861455 9.18451994074131 -0.0643333333333333 -0.140333333333333 0.487700582313437 0.120655745094693 -0.744373312727503 -1.83963231342604 P18615 NELFE P18615.3.S360.p_NELFE P18615-3_S360s _1_1_360_360 P18615-3 P18615-3|P18615-4 Isoform 2 of Negative elongation factor E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21883.21883.2 17.78 17.78 7.573 3 1 1 0 956.011 1831.0478 S360s TMT10 350 (K) SVWGSLAVQNsPK (G) S(0.0)VWGS(0.0)LAVQNS(0.99)PK K:TMT10,s:Phosphorylated S NELFE 44038 6 9 611.1 261.65 HUMAN 1 -3.1185 -9.1845 GSLEQPASPRKVLEE-p Q96MY7-2;S690-p GSLEQPASPRKVLEE 0.456623709758433 0.0127337055289225 -0.0983333333333333 -0.659 6.27354701860149 26.4140440088437 -0.0983333333333334 -0.659 0.235855114398778 0.00228347151875347 -1.33315094099463 -5.4038112494364 Q96MY7 FAM161B Q96MY7.2.S690.p_FAM161B Q96MY7-2_S690s _1_1_690_690 Q96MY7-2 Q96MY7-2 Isoform 2 of Protein FAM161B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18316.18316.5 18.27 18.27 5.994 3 1 1 0 589.9158 2865.5834 S690s TMT10 672 (K) LSIRDPEQGLEGSLEQPAsPRK (V) LS(0.0)IRDPEQGLEGS(0.0)LEQPAS(0.99)PRK K:TMT10,s:Phosphorylated S FAM161B 81514.7 1 1 5550.1 18.27 HUMAN 1 -6.2735 -26.414 GSLERMLSCPVRLSE-p Q8N2Y8;S519-p GSLERMLSCPVRLSE 0.204653309018144 0.909893183451435 -0.229 0.014 13.3337464194691 0.574006998480931 -0.229 0.014 0.0464114736247038 0.87619203345469 -2.57138377682475 0.16330586048012 Q8N2Y8 RUSC2 Q8N2Y8.S519.p_RUSC2 Q8N2Y8_S519s _1_1_519_519 Q8N2Y8 Q8N2Y8 Iporin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12846.12846.2 8.58 3.5 99 1 1 1 0 586.2821 1091.5903 S519s TMT10 517 (R) MLsCPVR (L) MLS(1.0)CPVR C:Carbamidomethylation,s:Phosphorylated S RUSC2 163333.5 2 2 1536.1 133.33 HUMAN 1 -13.3337 0.574 GSLKRSGSFSKLRAS-p Q07866-6;S552-p GSLKRSGSFSKLRAS 0.817374624643113 0.603826815618453 0.068 0.082 1.68311673301759 2.97189381706278 0.068 0.082 0.678716374073177 0.504441279151226 0.437423390063573 0.714598054365947 Q07866 KLC1 Q07866.6.S552.p_KLC1 Q07866-6_S552s _1_1_552_552 Q07866-6 Q07866-9|Q07866-4|G3V5R9|Q07866-6|Q07866-10|Q07866-5|G3V3H3 Isoform N of Kinesin light chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5447.5694.3 9.57 9.57 2.926 3 1 1 0 436.2358 1226.7257 S552s TMT10 549 (K) RSGsFSK (L) RS(0.0)GS(0.99)FS(0.0)K K:TMT10,s:Phosphorylated S KLC1 71518.1 2 9 1242.1 162.93 HUMAN 1 1.6831 2.9719 GSLMGPESPPAQEEE-p Q8N9T8;S628-p GSLMGPESPPAQEEE 0.283283360364086 0.00199119192244964 0.171666666666667 0.813 10.3453314239723 42.2068595488819 0.171666666666667 0.813 0.0923563705637905 6.01608612800549e-05 2.04177541992531 11.1699290809222 Q8N9T8 KRI1 Q8N9T8.S628.p_KRI1 Q8N9T8_S628s _1_1_628_628 Q8N9T8 Q8N9T8 Protein KRI1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19886.19886.5 23.34 23.34 2.373 3 1 1 0 912.294 4477.4571 S628s TMT10 615 (R) QLPALDGSLMGPEsPPAQEEEAPVSPHKKPAPQK (R) QLPALDGS(0.0)LMGPES(0.99)PPAQEEEAPVS(0.0)PHKKPAPQK K:TMT10,s:Phosphorylated S KRI1 83053 9 5 863.1 210.23 HUMAN 1 10.3453 42.2069 GSLPAHLSPHMFGGF-p Q8NHG8;S151-p GSLPAHLSPHMFGGF 0.248408747598316 0.0383760722253743 -0.214 -0.381 11.5550624573982 19.0240198638681 -0.214 -0.381 0.0699026683744099 0.0125198179426658 -2.25365442048526 -3.66933267442999 Q8NHG8 ZNRF2 Q8NHG8.S151.p_ZNRF2 Q8NHG8_S151s _1_1_151_151 Q8NHG8 Q8NHG8 E3 ubiquitin-protein ligase ZNRF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30233.30233.4 21.2 21.2 7.172 2 1 1 0 637.3496 2466.4096 S151s TMT10 141 (R) LVIGSLPAHLsPHMFGGFK (C) LVIGS(0.0)LPAHLS(0.99)PHMFGGFK K:TMT10,s:Phosphorylated S ZNRF2 24627.8 4 5 1463.1 140.17 HUMAN 1 -11.5551 -19.024 GSLPPVNT_______-p A2ABF9;T1267-p GSLPPVNT_______ 0.165089109092983 0.873332133906158 0.390333333333333 -0.027 15.6614467712371 0.828421966882763 0.390333333333333 -0.0270000000000001 0.0271553448836785 0.82633814958968 3.00345112019362 -0.230246067552164 A2ABF9 EHMT2 A2ABF9.T1267.p_EHMT2 A2ABF9_T1267t _1_1_1267_1267 A2ABF9 A2ABF9|A0A0G2JK64|A2ABF8 Histone-lysine N-methyltransferase EHMT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31879.31879.3 14.04 14.04 1.978 2 1 1 0 783.0826 2267.2485 T1267t TMT10 1249 (R) LDPHPELLPELGSLPPVNt (-) LDPHPELLPELGS(0.0)LPPVNT(0.99) t:Phosphorylated T EHMT2 141220.9 1 14 719.1 237.26 HUMAN 1 15.6614 -0.8284 GSLPQLVSPIVSRSP-p F5H1U9;S230-p GSLPQLVSPIVSRSP 0.302096047363256 0.174985811914611 -0.315666666666667 -0.295666666666667 9.74096647704341 9.95405977329365 -0.315666666666667 -0.295666666666667 0.106145931422076 0.101063427431477 -1.93674056427462 -1.97293644345253 F5H1U9 NotFound F5H1U9.S230.p_NotFound F5H1U9_S230s _1_1_230_230 F5H1U9 F5H1U9|O75970|O75970-2|O75970-3|O75970-5 Multiple PDZ domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25012.25012.3 14.74 14.74 5.652 3 1 1 0 554.6464 1581.9526 S230s TMT10 223 (R) GSLPQLVsPIVSR (S) GS(0.0)LPQLVS(0.99)PIVS(0.0)R s:Phosphorylated S MPDZ 224434.7 1 1 1525.1 134.07 HUMAN 1 -9.741 -9.9541 GSLPTTPSEQRQRKI-p O15400;S81-p GSLPTTPSEQRQRKI 0.260789944862731 0.140620659695676 0.426333333333333 -0.163333333333333 11.05753653012 11.2263585025212 0.426333333333333 -0.163333333333333 0.0783874157463264 0.0753987506562524 2.16619232805058 -2.19480076616548 O15400 STX7 O15400.S81.p_STX7 O15400_S81s _1_1_81_81 O15400 O15400|O15400-2 Syntaxin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15897.15897.2 11.03 11.03 1.278 4 1 1 0 879.4197 1677.8645 S81s TMT10 72 (K) EFGSLPTTPsEQR (Q) EFGS(0.0)LPT(0.0)T(0.0)PS(0.99)EQR s:Phosphorylated S STX7 29929.1 1 5 1215.1 165.8 HUMAN 1 11.0575 -11.2264 GSLQRSRSDIDVNAA-p E3W994;S370-p GSLQRSRSDIDVNAA 0.476014809225879 0.952589514066416 0.105 0.00666666666666669 5.93658398892486 0.299489979979928 0.105 0.0066666666666667 0.254883428974643 0.933363905304246 1.27325830136734 0.087567150964186 E3W994 NotFound E3W994.S370.p_NotFound E3W994_S370s _1_1_370_370 E3W994 J3KR49|E3W994|E7ENG2|B3KR06|O75122-2|O75122-3|E7EW49|E7ERI8|A0A0U1RQI6 CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9690.9690.2 16.4 16.4 1.177 2 1 1 0 956.9989 1833.023 S370s TMT10 368 (R) SRsDIDVNAAAGAK (A) S(0.0)RS(0.99)DIDVNAAAGAK K:TMT10,s:Phosphorylated S CLASP2 139660.6 12 5 158.1 498.15 HUMAN 1 5.9366 0.2995 GSLRPAKSVPSVFAA-p Q9Y2J4-4;S725-p GSLRPAKSVPSVFAA 0.375268892081527 0.0892408216731023 0.130666666666667 0.242333333333333 7.8766366138955 13.8873997239602 0.130666666666667 0.242333333333333 0.163055832686223 0.0408563934922718 1.61375284168846 2.67068160324071 Q9Y2J4 AMOTL2 Q9Y2J4.4.S725.p_AMOTL2 Q9Y2J4-4_S725s _1_1_725_725 Q9Y2J4-4 Q9Y2J4-4|Q9Y2J4-2|Q9Y2J4-3 Isoform 4 of Angiomotin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30081.30081.3 29.64 26.05 2.113 6 1 1 0 891.7677 2593.3208 S725s TMT10 725 (K) sVPSVFAAAAAGTQGWQGLSSSER (Q) S(0.99)VPS(0.0)VFAAAAAGT(0.0)QGWQGLS(0.0)S(0.0)S(0.0)ER s:Phosphorylated S AMOTL2 92272.2 7 9 849.1 212.62 HUMAN 1 7.8766 13.8874 GSLRRSGSFGKLRDA-p Q9H0B6;S545-p GSLRRSGSFGKLRDA 0.15127853533293 0.447646329775473 0.302666666666667 0.16 16.5220901711414 4.65242556525391 0.302666666666667 0.16 0.0222736290673476 0.342576401774571 3.16909006011407 1.03976210584871 Q9H0B6 KLC2 Q9H0B6.S545.p_KLC2 Q9H0B6_S545s _1_1_545_545 Q9H0B6 Q9H0B6|Q9H0B6-2|A8MZ87 Kinesin light chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5873.5873.3 7.24 3.75 2.251 2 1 1 0 426.232 1196.7152 S545s TMT10 542 (R) RSGsFGK (L) RS(0.0)GS(0.99)FGK K:TMT10,s:Phosphorylated S KLC2 69332.8 1 5 1131.1 174.01 HUMAN 1 16.5221 4.6524 GSLTLTISGESPKAG-p Q6ZRV2;S942-p GSLTLTISGESPKAG 0.881473657723633 0.0175725277227525 -0.0266666666666667 -0.345333333333333 1.07751837013375 24.1939729650207 -0.0266666666666667 -0.345333333333333 0.780275845570691 0.00380717380351448 -0.293211636921021 -4.83670439850143 Q6ZRV2 FAM83H Q6ZRV2.S942.p_FAM83H Q6ZRV2_S942s _1_1_942_942 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20699.20699.3 8.93 8.32 1.295 5 1 1 0 610.0004 1748.0206 S942s TMT10 935 (R) GSLTLTIsGESPK (A) GS(0.0)LT(0.0)LT(0.0)IS(0.99)GES(0.0)PK K:TMT10,s:Phosphorylated S FAM83H 127633.5 6 25 7.1 1347.23 HUMAN 1 -1.0775 -24.194 GSLTNHFSFEKKKAR-p P22102;S802-p GSLTNHFSFEKKKAR 0.242897158523429 0.377752224330702 0.201666666666667 0.104333333333333 11.7562618371038 5.61583933882517 0.201666666666667 0.104333333333333 0.0667380966099453 0.27442019342947 2.28917539200004 1.21554083911499 P22102 GART P22102.S802.p_GART P22102_S802s _1_1_802_802 P22102 P22102 Trifunctional purine biosynthetic protein adenosine-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17005.17005.3 12.13 12.13 4.182 3 1 1 0 640.3201 1838.9801 S802s TMT10 794 (K) NGSLTNHFsFEK (K) NGS(0.0)LT(0.0)NHFS(0.99)FEK K:TMT10,s:Phosphorylated S GART 109020.4 4 5 3543.1 48.65 HUMAN 1 11.7563 5.6158 GSMAKRLSQIGVENT-p P09972;S45-p GSMAKRLSQIGVENT 0.0507410919483046 0.00867598762154737 -0.519 -0.571666666666667 28.4704976761502 29.2522087575214 -0.519 -0.571666666666667 0.00142216580587671 0.00118789792645931 -5.97993372411762 -6.19828999567073 P09972 ALDOC P09972.S45.p_ALDOC P09972_S45s _1_1_45_45 P09972 P09972|A8MVZ9 Fructose-bisphosphate aldolase C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9178.9178.4 11.97 11.97 5.703 2 1 1 0 528.2701 2030.094 S45s TMT10 43 (K) RLsQIGVENTEENRR (L) RLS(0.99)QIGVENT(0.0)EENRR s:Phosphorylated S ALDOC 39854.5 1 13 1050.2 183.91 HUMAN 1 -28.4705 -29.2522 GSMAQEGSPGRAPIN-p Q8IV31;S155-p GSMAQEGSPGRAPIN 0.28232763497657 0.0504318281101793 0.188 0.360333333333333 10.3849906752998 17.3349896517964 0.188 0.360333333333333 0.0915168224229144 0.0184714519621161 2.04868314049944 3.32631058856416 Q8IV31 TMEM139 Q8IV31.S155.p_TMEM139 Q8IV31_S155s _1_1_155_155 Q8IV31 Q8IV31 Transmembrane protein 139 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14458.14458.4 18.6 18.6 3.754 3 1 1 0 617.7972 2388.1961 S155s TMT10 144 (R) MASEGSMAQEGsPGRAPINLR (L) MAS(0.0)EGS(0.0)MAQEGS(0.99)PGRAPINLR s:Phosphorylated S TMEM139 23956.9 3 2 3101.1 60.61 HUMAN 1 10.385 17.335 GSMFRQQSIEDKEDK-p Q5JSZ5;S480-p GSMFRQQSIEDKEDK 0.329974972036682 0.158087349091926 -0.155333333333333 -0.242666666666667 9.00116367300262 10.5373023131775 -0.155333333333333 -0.242666666666667 0.125858813344378 0.08836286094526 -1.80856428932473 -2.07434261336563 Q5JSZ5 PRRC2B Q5JSZ5.S480.p_PRRC2B Q5JSZ5_S480s_1_1_480_480 Q5JSZ5 Q5JSZ5|Q5JSZ5-5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8101.8101.4 15 15 99 1 1 1 0 669.1109 2610.4818 Q478q S480s Hydrogen 478 (R) qQsIEDKEDKPPPRQK (F) Q(1.0)QS(1.0)IEDKEDKPPPRQK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S PRRC2B 244103.4 14 58 36.2 882.05 HUMAN 1 -9.0012 -10.5373 GSMNARVTFRYDVLN-p A0A0J9YW40;T518-p GSMNARVTFRYDVLN 0.722639639573387 0.0142372187802329 -0.0616666666666667 -0.485 2.66933545632652 25.6084010908386 -0.0616666666666667 -0.485 0.5408370737919 0.00274890601077123 -0.652411388278796 -5.19284700918146 A0A0J9YW40 NotFound A0A0J9YW40.T518.p_NotFound A0A0J9YW40_T518t_1_1_518_518 A0A0J9YW40 A0A0J9YW40|Q6IEE7 Transmembrane protein 132E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22268.22268.5 7.87 5.61 1.194 5 1 1 0 739.3693 3595.8715 M513m T518t N525n Hydrogen 508 (K) ESRGSmNARVtFRYDVLnAPLEMTVWVPK (L) ES(0.0)RGS(0.0)M(0.99)N(0.0)ARVT(0.99)FRY(0.0)DVLN(0.99)APLEM(0.0)T(0.0)VWVPK K:TMT10-Lys-Only,m:Oxidized methionine,t:Phosphorylated T,n:Deamidated TMEM132E 116889.2 1 1 7072.1 7.87 HUMAN 1 -2.6693 -25.6084 GSNFRGGSDGYGSGR-p P22626;S231-p GSNFRGGSDGYGSGR 0.723881735534663 0.0705429713492772 0.0843333333333333 0.251333333333333 2.65595912167711 15.3124089074092 0.0843333333333333 0.251333333333333 0.542505427983777 0.0294278890010052 0.649623449881735 2.93528714951713 P22626 HNRNPA2B1 P22626.S231.p_HNRNPA2B1 P22626_S231s_1_1_231_231 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11790.11790.3 9.7 9.7 9.698 4 1 1 0 861.041 2500.1551 N226n S231s TMT10 214 (R) GGGGNFGPGPGSnFRGGsDGYGSGR (G) GGGGN(0.0)FGPGPGS(0.0)N(0.99)FRGGS(0.99)DGY(0.0)GS(0.0)GR n:Deamidated,s:Phosphorylated S HNRNPA2B1 37486.1 3 11 299.1 378.08 HUMAN 1 2.656 15.3124 GSNISGASSDISLDE-p P22059;S385-p GSNISGASSDISLDE 0.207096794773857 0.00529900879737328 0.309666666666667 -0.606666666666667 13.220485035652 33.0504991581081 0.309666666666667 -0.606666666666667 0.0476377780255444 0.000495393249310357 2.55087410032928 -7.40334923158283 P22059 OSBP P22059.S385.p_OSBP P22059_S385sS386sS389s_3_3_385_389 P22059 P22059 Oxysterol-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20903.20903.3 9.41 9.41 3.845 7 3 3 0 890.7186 2430.24 S385s S386s S389s TMT10 377 (R) TGSNISGAssDIsLDEQYK (H) T(0.0)GS(0.0)NIS(0.0)GAS(0.99)S(0.99)DIS(0.99)LDEQY(0.0)K K:TMT10,s:Phosphorylated S OSBP 90274.8 11 16 468.1 302.79 HUMAN 1 13.2205 -33.0505 GSNSLQNSPIRGLPH-p Q9P2Q2;S657-p GSNSLQNSPIRGLPH 0.74023978904261 0.0225165150410783 0.0753333333333333 -0.408333333333333 2.47775541485523 22.5022806187096 0.0753333333333333 -0.408333333333333 0.565229029382804 0.00562046099364883 0.612184939366081 -4.43291667086463 Q9P2Q2 FRMD4A Q9P2Q2.S657.p_FRMD4A Q9P2Q2_S657s _1_1_657_657 Q9P2Q2 Q9P2Q2 FERM domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10577.10577.3 14.37 9.42 1.122 6 1 1 0 920.4319 2679.3106 S657s TMT10 637 (K) RFPSTGSCAEAGGGSNSLQNsPIR (G) RFPS(0.0)T(0.0)GS(0.0)CAEAGGGS(0.0)NS(0.0)LQNS(0.99)PIR C:Carbamidomethylation,s:Phosphorylated S FRMD4A 116026.8 1 7 787.1 225.06 HUMAN 1 2.4778 -22.5023 GSNSVLNTPPTTPES-p Q4LE39;T1022-p GSNSVLNTPPTTPES 0.309976283681013 0.357800455290477 0.200333333333333 -0.0883333333333333 9.51041802343314 5.92170314005425 0.200333333333333 -0.0883333333333333 0.111933013889141 0.255758270221187 1.8967638480737 -1.27030456621168 Q4LE39 ARID4B Q4LE39.T1022.p_ARID4B Q4LE39_T1022t_1_1_1022_1022 Q4LE39 Q4LE39|Q4LE39-2 AT-rich interactive domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18352.18352.4 10.89 10.89 2.512 13 1 1 0 972.4818 3805.9496 N1021n T1022t TMT10 1008 (R) KAEFPSSGSNSVLntPPTTPESPSSVTVTEGSR (Q) KAEFPS(0.0)S(0.0)GS(0.0)N(0.0)S(0.0)VLN(0.99)T(0.99)PPT(0.0)T(0.0)PES(0.0)PS(0.0)S(0.0)VT(0.0)VT(0.0)EGS(0.0)R K:TMT10,n:Deamidated,t:Phosphorylated T ARID4B 148890.9 1 12 191.1 463.89 HUMAN 1 9.5104 -5.9217 GSPARPPSPRLDVSS-p P83369;S21-p GSPARPPSPRLDVSS 0.147946322560902 0.0343280109159758 0.365333333333333 -0.325333333333333 16.843458667404 19.7310570394624 0.365333333333333 -0.325333333333333 0.0206849337019132 0.01063884045492 3.23186589088199 -3.81795711371764 P83369 LSM11 P83369.S21.p_LSM11 P83369_S21s _1_1_21_21 P83369 P83369 U7 snRNA-associated Sm-like protein LSm11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4387.4387.2 11.6 11.6 8.664 3 1 1 0 808.9095 1536.8444 S21s TMT10 10 (R) SAGAGSPARPPsPR (L) S(0.0)AGAGS(0.0)PARPPS(0.99)PR s:Phosphorylated S LSM11 39670.1 2 1 3741.1 44.09 HUMAN 1 16.8435 -19.7311 GSPDPEPSPEPEPKP-p O00204;S324-p GSPDPEPSPEPEPKP 0.303060588055965 0.12844966726762 0.147 0.174666666666667 9.7163349128131 11.7526645333353 0.147 0.174666666666667 0.106749662029533 0.0667933993303471 1.9324675434297 2.28742572451652 O00204 SULT2B1 O00204.S324.p_SULT2B1 O00204_S318sS324s_2_2_318_324 O00204 O00204|O00204-2 Sulfotransferase family cytosolic 2B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30287.30287.4 13.24 13.24 6.478 6 2 2 0 1238.2953 4790.2344 S318s S324s TMT10 303 (R) GMPTFPWDEDPEEDGsPDPEPsPEPEPKPSLEPNTSLER (E) GMPT(0.0)FPWDEDPEEDGS(0.99)PDPEPS(0.99)PEPEPKPS(0.0)LEPNT(0.0)S(0.0)LER K:TMT10,s:Phosphorylated S SULT2B1 41535.2 1 4 3557.1 48.28 HUMAN 1 9.7163 11.7527 GSPEASISGSKGDLK-p Q09666;S5737-p GSPEASISGSKGDLK 0.0394122052774579 0.0316359987498557 -0.535333333333333 0.296666666666667 31.6294515622256 20.2592594068006 -0.535333333333333 0.296666666666667 0.0006871552101887 0.00942050228660412 -6.94362057011362 3.93107297410681 Q09666 AHNAK Q09666.S5737.p_AHNAK Q09666_S5737s _1_1_5737_5737 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10282.10970.3 19.55 19.55 1.117 5 1 1 0 762.7491 2206.2646 S5737s TMT10 5724 (K) GKGGVTGSPEASIsGSK (G) GKGGVT(0.0)GS(0.0)PEAS(0.0)IS(0.99)GS(0.0)K K:TMT10,s:Phosphorylated S AHNAK 629603.7 14 155 1.1 4313.36 HUMAN 1 -31.6295 20.2593 GSPERDPSPVPKPSP-p A8K855;S206-p GSPERDPSPVPKPSP 0.911605742223265 0.421831994835209 0.0191666666666667 -0.0765 0.784273873620278 4.98950582636783 0.0191666666666667 -0.0765 0.834781109321532 0.316992814130399 0.218854575622278 -1.10191232044037 A8K855 EFCAB7 A8K855.S206.p_EFCAB7 A8K855_S206sS212s_2_2_206_212 A8K855 A8K855|A8K855-2 EF-hand calcium-binding domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10004.10004.4 10.72 10.72 1.394 3 2 2 0 871.9398 3324.8056 S206s S212s TMT10 191 (R) HQFGNHIEGSPERDPsPVPKPsPK (I) HQFGNHIEGS(0.0)PERDPS(0.99)PVPKPS(0.99)PK K:TMT10,s:Phosphorylated S EFCAB7 73064 2 3 3826.1 42.29 HUMAN 2 0.7843 -4.9895 GSPFAGNSPAREGEQ-p Q9UPT8;S1275-p GSPFAGNSPAREGEQ 0.187254795627764 0.811297337793882 -0.232333333333333 -0.0246666666666667 14.292754051933 1.27315395556499 -0.232333333333333 -0.0246666666666667 0.0372155631189072 0.745906865372756 -2.74682881563627 -0.341024271222839 Q9UPT8 ZC3H4 Q9UPT8.S1275.p_ZC3H4 Q9UPT8_S1275s _1_1_1275_1275 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15603.15667.4 18.35 15.72 7.608 5 1 1 0 718.8545 2792.4215 S1275s TMT10 1265 (K) TGSGSPFAGNsPAREGEQDAASLK (D) T(0.0)GS(0.0)GS(0.0)PFAGNS(0.99)PAREGEQDAAS(0.0)LK K:TMT10,s:Phosphorylated S ZC3H4 140881.7 11 11 427.1 318.7 HUMAN 1 -14.2928 -1.2732 GSPGAAITPLPSTQN-p P46109;T228-p GSPGAAITPLPSTQN 0.395835711166129 0.133959524553788 0.117 0.154333333333333 7.42640478445318 11.5072350733686 0.117 0.154333333333333 0.18086707765105 0.0706767373012533 1.53546580056874 2.24415803979781 P46109 CRKL P46109.T228.p_CRKL P46109_T228t_1_1_228_228 P46109 P46109 Crk-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28511.28511.4 9.71 5.38 8.562 12 1 1 0 1336.6741 5260.7319 N194n N196n T228t N235n TMT10 194 (R) nSnSYGIPEPAHAYAQPQTTTPLPAVSGSPGAAItPLPSTQnGPVFAK (A) N(1.0)S(0.0)N(1.0)S(0.0)Y(0.0)GIPEPAHAY(0.0)AQPQT(0.0)T(0.0)T(0.0)PLPAVS(0.0)GS(0.0)PGAAIT(0.99)PLPS(0.0)T(0.0)QN(1.0)GPVFAK K:TMT10,n:Deamidated,t:Phosphorylated T CRKL 33890.5 2 6 2097.1 97.7 HUMAN 1 7.4264 11.5072 GSPGLSKSMFDLTNS-p Q8N9U0;S174-p GSPGLSKSMFDLTNS 0.271908041557881 0.96621589952993 0.160666666666667 -0.00499999999999997 10.7140648850214 0.212614798873989 0.160666666666667 -0.00437288483152354 0.0848386035725402 0.95222267746341 2.10608801508032 -0.0627384878782606 Q8N9U0 TC2N Q8N9U0.S174.p_TC2N Q8N9U0_S174s _1_1_174_174 Q8N9U0 Q8N9U0|Q8N9U0-2 Tandem C2 domains nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18445.18445.3 15.31 15.31 3.863 4 1 1 0 532.2427 1514.7471 S174s TMT10 174 (K) sMFDLTNSSQR (F) S(0.99)MFDLT(0.0)NS(0.0)S(0.0)QR s:Phosphorylated S TC2N 55796.6 8 5 1080.1 179.95 HUMAN 1 10.7141 -0.2126 GSPGSPGSPGSVPKN-p Q6IN85;S780-p GSPGSPGSPGSVPKN 0.645371684403421 0.0323560082421056 0.068 0.279666666666667 3.55739121385303 20.1056257537404 0.068 0.279666666666667 0.440819582202154 0.00975972149231268 0.831518945205009 3.89798342821227 Q6IN85 PPP4R3A Q6IN85.S780.p_PPP4R3A Q6IN85_S780s _1_1_780_780 Q6IN85 Q6IN85|Q6IN85-2|Q6IN85-4 Serine/threonine-protein phosphatase 4 regulatory subunit 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17340.17991.4 27.35 27.35 1.132 13 1 1 0 894.696 3495.7967 S780s TMT10 754 (K) TNLTSQSSTTNLPGSPGSPGSPGSPGsPGSVPK (N) T(0.0)NLT(0.0)S(0.0)QS(0.0)S(0.0)T(0.0)T(0.0)NLPGS(0.0)PGS(0.0)PGS(0.0)PGS(0.0)PGS(0.99)PGS(0.0)VPK K:TMT10,s:Phosphorylated S PPP4R3A 95994.2 2 8 842.1 214.14 HUMAN 1 3.5574 20.1056 GSPGVPGSPPEAASE-p Q8N196;S72-p GSPGVPGSPPEAASE 0.158414346785039 0.0317805608871883 0.489666666666667 -0.385 16.030856953405 20.2267899828955 0.489666666666667 -0.385 0.0249410254004284 0.00949119730532596 3.07411738390653 -3.92406668881194 Q8N196 SIX5 Q8N196.S72.p_SIX5 Q8N196_S66sS72s_2_2_66_72 Q8N196 Q8N196 Homeobox protein SIX5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36072.36072.5 21.37 20.24 5.829 5 2 2 0 999.6792 4834.4445 S66s S72s TMT10 34 (R) QLLQTLQAAEGEAAAAAGAGAGAAAAGAEGPGsPGVPGsPPEAASEPPTGLR (F) QLLQT(0.0)LQAAEGEAAAAAGAGAGAAAAGAEGPGS(0.99)PGVPGS(0.99)PPEAAS(0.0)EPPT(0.0)GLR s:Phosphorylated S SIX5 74902.4 1 1 5246.1 21.37 HUMAN 1 16.0309 -20.2268 GSPKCFRSVSPERMS-p Q14966;S558-p GSPKCFRSVSPERMS 0.670250155184826 0.2628476358403 0.059 0.116333333333333 3.25408912425843 7.64496207844543 0.059 0.116333333333333 0.472705970382308 0.171990235894837 0.771564628804696 1.57302789669673 Q14966 ZNF638 Q14966.S558.p_ZNF638 Q14966_S558s _1_1_558_558 Q14966 Q14966|Q14966-3|Q14966-4|A0A096LPH6|Q14966-2 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7244.7244.3 7.43 7.43 2.084 2 1 1 0 482.898 1366.7099 S558s TMT10 555 (K) CFRsVSPER (M) CFRS(0.99)VS(0.0)PER C:Carbamidomethylation,s:Phosphorylated S ZNF638 222047.2 1 7 165.1 494.68 HUMAN 1 3.2541 7.645 GSPKGSPSRHSRAAT-p K7EKI0;S29-p GSPKGSPSRHSRAAT 0.0611233751023293 0.0202576394847618 0.688 -0.449 26.486218847023 23.1877751874498 0.688 -0.449 0.00224583639378149 0.00479979270417096 5.4303089261555 -4.5937587782867 K7EKI0 EVPL K7EKI0.S29.p_EVPL K7EKI0_S27sS29s_2_2_27_29 K7EKI0 K7EKI0|Q92817 Envoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5069.5280.4 8.3 8.3 1.812 4 2 2 0 540.784 2000.1856 S27s S29s TMT10 17 (K) GSPAKGSPKGsPsR (H) GS(0.0)PAKGS(0.0)PKGS(0.99)PS(0.99)R K:TMT10,s:Phosphorylated S EVPL 235195.7 3 12 1436.1 142.57 HUMAN 1 26.4862 -23.1878 GSPKMPKSPKSPRSP-p Q92610;S328-p GSPKMPKSPKSPRSP 0.526673549887385 0.0421227895274775 0.132333333333333 -0.742333333333333 5.15297290731348 18.4319988960928 0.132333333333333 -0.742333333333334 0.305283062164251 0.0143482888294312 1.13201871362204 -3.54723499487973 Q92610 ZNF592 Q92610.S328.p_ZNF592 Q92610_S328s _1_1_328_328 Q92610 Q92610|H0YM74 Zinc finger protein 592 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7177.7177.4 8.26 3.81 5.915 2 1 1 0 449.5121 1715.0605 S328s TMT10 325 (K) MPKsPKSPR (S) MPKS(0.99)PKS(0.0)PR K:TMT10,s:Phosphorylated S ZNF592 140207.3 1 5 164.1 494.76 HUMAN 1 5.153 -18.432 GSPKRIQSPLNNKLL-p Q9UBZ9;S1088-p GSPKRIQSPLNNKLL 0.67495914290899 0.281309074022863 -0.0596666666666667 -0.164333333333333 3.19788047381137 7.25860502661032 -0.0596666666666667 -0.164333333333333 0.478863739455654 0.187992055876613 -0.760325305051183 -1.50577750357809 Q9UBZ9 REV1 Q9UBZ9.S1088.p_REV1 Q9UBZ9_S1088s _1_1_1088_1088 Q9UBZ9 Q9UBZ9|Q9UBZ9-2 DNA repair protein REV1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9559.9559.3 7.57 7.57 99 1 1 1 0 536.6395 1527.9371 S1088s TMT10 1085 (K) RIQsPLNNK (L) RIQS(1.0)PLNNK K:TMT10,s:Phosphorylated S REV1 139443.7 1 5 1665.1 122.52 HUMAN 1 -3.1979 -7.2586 GSPLKAYTPVVVTLW-p P21127;T595-p GSPLKAYTPVVVTLW 0.532600177749201 0.0846235976851816 -0.0973333333333333 0.192666666666667 5.06280745068793 14.1982045695795 -0.0973333333333334 0.192666666666667 0.311687406247679 0.0380346604103359 -1.11555555216432 2.72771782968701 P21127 CDK11B P21127.T595.p_CDK11B P21127_T595t _1_1_595_595 P21127 P21127|J3QR44|A0A0D9SEN2|A0A0D9SER5|P21127-2|B7ZVY7|P21127-3|P21127-8|A0A0D9SEI3|P21127-9|J3QR29|P21127-6|P21127-10|P21127-5|P21127-4|P21127-12 Cyclin-dependent kinase 11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37051.37051.4 21.97 22.52 4.666 4 1 1 0 725.413 2818.6635 T595t TMT10 593 (K) AYtPVVVTLWYRAPELLLGAK (E) AY(0.0)T(0.99)PVVVT(0.0)LWY(0.0)RAPELLLGAK K:TMT10,t:Phosphorylated T CDK11B 92876.5 23 8 421.1 320.22 HUMAN 1 -5.0628 14.1982 GSPLKAYTPVVVTQW-p Q9UQ88;T583-p GSPLKAYTPVVVTQW 0.705319541148296 0.0706276903047306 -0.0723333333333333 0.213 2.8496477642334 15.3024331658245 -0.0723333333333334 0.213 0.518842118059097 0.0294955625372663 -0.689705039894102 2.93340587816664 Q9UQ88 CDK11A Q9UQ88.T583.p_CDK11A Q9UQ88_T583t _1_1_583_583 Q9UQ88 Q9UQ88|Q9UQ88-2|Q9UQ88-3|Q5QPR3|Q9UQ88-4|Q5QPR4|Q9UQ88-10|Q9UQ88-5 Cyclin-dependent kinase 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24795.24795.2 17.84 13.05 3.223 4 1 1 0 896.4536 1711.9369 T583t TMT10 581 (K) AYtPVVVTQWYR (A) AY(0.0)T(0.99)PVVVT(0.0)QWY(0.0)R t:Phosphorylated T CDK11A 91588.2 4 15 421.3 320.22 HUMAN 1 -2.8496 15.3024 GSPNRAYTHQVVTRW-p P50613;T170-p GSPNRAYTHQVVTRW 0.461071432758157 0.0128787446023325 -0.116666666666667 0.581333333333333 6.19953366267219 26.3232154553251 -0.116666666666667 0.581333333333333 0.239909051506139 0.00233173104212666 -1.3200320307522 5.37972129312122 P50613 CDK7 P50613.T170.p_CDK7 P50613_T170t _1_1_170_170 P50613 P50613|D6RAD4|D6R9G1 Cyclin-dependent kinase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5092.5092.2 15.16 8.11 4.22 3 1 1 0 692.3538 1303.732 T170t TMT10 168 (R) AYtHQVVTR (W) AY(0.0)T(0.99)HQVVT(0.0)R t:Phosphorylated T CDK7 39323 5 2 4008.1 39.18 HUMAN 1 -6.1995 26.3232 GSPPPAATPTPTPPT-p Q9Y6I3-1;T546-p GSPPPAATPTPTPPT 0.572848042828861 0.587347925786436 0.0973333333333333 0.0703333333333334 4.45271699144458 3.12456497374059 0.0973333333333333 0.0703333333333334 0.358697459574263 0.487016306414565 1.00273656142482 0.7454941014307 Q9Y6I3 EPN1 Q9Y6I3.1.T546.p_EPN1 Q9Y6I3-1_T546t _1_1_546_546 Q9Y6I3-1 Q9Y6I3-1|Q9Y6I3-3 Isoform 2 of Epsin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16613.16613.3 18.26 18.26 1.752 6 1 1 0 827.7585 2401.2925 T546t TMT10 532 (R) GSLAEAVGSPPPAAtPTPTPPTR (K) GS(0.0)LAEAVGS(0.0)PPPAAT(0.99)PT(0.0)PT(0.0)PPT(0.0)R t:Phosphorylated T EPN1 69266.5 7 5 856.1 210.87 HUMAN 1 4.4527 3.1246 GSPQGIKSPSKPPGP-p Q92766;S42-p GSPQGIKSPSKPPGP 0.46037124209973 0.00210285200041402 -0.123666666666667 -0.977333333333333 6.21007388858826 41.6367136146778 -0.123666666666667 -0.977333333333333 0.239327503813114 6.86007144171882e-05 -1.32190148534311 -10.8926000863592 Q92766 RREB1 Q92766.S42.p_RREB1 Q92766_S36sS42s_2_2_36_42 Q92766 Q92766|Q92766-3|Q92766-5|Q92766-6 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11327.11327.4 8.39 8.39 1.153 4 2 2 0 763.894 2891.6306 N33n S36s S42s TMT10 30 (K) VTEnGGsPQGIKsPSKPPGPNR (I) VT(0.0)EN(0.99)GGS(0.99)PQGIKS(0.99)PS(0.0)KPPGPN(0.0)R K:TMT10,n:Deamidated,s:Phosphorylated S RREB1 184269.8 2 30 179.1 480.48 HUMAN 1 -6.2101 -41.6367 GSPQSPPSPPVQQPK-p O95429;S289-p GSPQSPPSPPVQQPK 0.207653889219843 0.737016495021713 0.191666666666667 0.049 13.1720497403374 1.82722968497637 0.191666666666667 0.049 0.0481720386318502 0.65656394741499 2.54211608450383 0.470138621759881 O95429 BAG4 O95429.S289.p_BAG4 O95429_S289s _1_1_289_289 O95429 O95429|O95429-2 BAG family molecular chaperone regulator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27727.27727.4 26.94 26.94 2.83 14 1 1 0 1179.5573 4635.234 S289s Hydrogen 255 (R) YPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPsPPVQQPK (D) Y(0.0)PWPS(0.0)S(0.0)APS(0.0)APPGNLY(0.0)MT(0.0)ES(0.0)T(0.0)S(0.0)PWPS(0.0)S(0.0)GS(0.0)PQS(0.0)PPS(0.99)PPVQQPK K:TMT10-Lys-Only,s:Phosphorylated S BAG4 49821.4 6 2 4447.1 31.32 HUMAN 1 13.172 1.8272 GSPRDLQSPDFTTGF-p Q9P2D0;S1045-p GSPRDLQSPDFTTGF 0.335167066678141 0.124779524420452 -0.265 0.165 8.85321217986849 11.9208225968634 -0.265 0.165 0.130220327129403 0.0642565997410906 -1.78295350847975 2.31715137273689 Q9P2D0 IBTK Q9P2D0.S1045.p_IBTK Q9P2D0_S1045s _1_1_1045_1045 Q9P2D0 Q9P2D0|E7EPI0|Q9P2D0-2|E9PDR5 Inhibitor of Bruton tyrosine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19448.19448.4 22.1 22.1 4.862 4 1 1 0 726.6234 2823.5132 S1045s TMT10 1042 (R) DLQsPDFTTGFHSDKIEAK (V) DLQS(0.99)PDFT(0.0)T(0.0)GFHS(0.0)DKIEAK K:TMT10,s:Phosphorylated S IBTK 152465 5 6 907.1 202.21 HUMAN 1 -8.8532 11.9208 GSPRLQLSPLTLCPL-p Q5T1R4;S2034-p GSPRLQLSPLTLCPL 0.919260986226845 0.402733282051059 0.0193333333333333 0.089 0.713308072286743 5.25420183703175 0.0193333333333333 0.089 0.848533890540534 0.298249563198577 0.20033340919709 1.15020190821558 Q5T1R4 HIVEP3 Q5T1R4.S2034.p_HIVEP3 Q5T1R4_S2034s _1_1_2034_2034 Q5T1R4 Q5T1R4|Q5T1R4-2 Transcription factor HIVEP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30595.30595.3 17.14 17.14 2.818 2 1 1 0 592.992 1696.9981 S2034s TMT10 2031 (R) LQLsPLTLCPLGR (E) LQLS(0.99)PLT(0.0)LCPLGR C:Carbamidomethylation,s:Phosphorylated S HIVEP3 261285.6 4 36 465.1 303.46 HUMAN 1 0.7133 5.2542 GSPRNLGTPTSSTPR-p O14523;T417-p GSPRNLGTPTSSTPR 0.492994289859056 0.0837938107007606 0.11 -0.219333333333333 5.6558734330631 14.2555006699412 0.11 -0.219333333333333 0.271902159400444 0.0375361678964163 1.22300860455165 -2.73827154448213 O14523 C2CD2L O14523.T417.p_C2CD2L O14523_T417t _1_1_417_417 O14523 O14523-2|E9PK05 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14190.14190.4 12.63 12.63 1.325 8 1 1 0 599.076 2313.3178 T417t TMT10 414 (R) NLGtPTSSTPRPSITPTK (K) NLGT(0.99)PT(0.0)S(0.0)S(0.0)T(0.0)PRPS(0.0)IT(0.0)PT(0.0)K K:TMT10,t:Phosphorylated T C2CD2L 76636.4 4 8 411.1 322.51 HUMAN 1 5.6559 -14.2555 GSPRTPVSPVKFSPG-p P23443-2;S424-p GSPRTPVSPVKFSPG 0.199306780118349 0.0141884945196519 0.996 -0.717333333333333 13.6332386295691 25.63140846656 0.996 -0.717333333333333 0.0433187720289047 0.00273438179127735 2.62582370763696 -5.19878791861034 P23443 RPS6KB1 P23443.2.S424.p_RPS6KB1 P23443-2_S424s _1_1_424_424 P23443-2 P23443|P23443-2|P23443-5|P23443-3 Isoform Alpha II of Ribosomal protein S6 kinase beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26199.26199.3 15.22 9.82 2.076 3 1 1 0 772.4046 2235.2326 S424s TMT10 421 (R) TPVsPVKFSPGDFWGR (G) T(0.0)PVS(0.99)PVKFS(0.0)PGDFWGR K:TMT10,s:Phosphorylated S RPS6KB1 56530.6 4 7 1663.1 122.57 HUMAN 1 13.6332 -25.6314 GSPSPAGTPPQPKRP-p Q9BR39;T490-p GSPSPAGTPPQPKRP 0.956933752148643 0.888480252586774 0.00866666666666666 -0.0173333333333333 0.375575348135739 0.721386614383847 0.00866666666666666 -0.0173333333333333 0.917154423819894 0.846956954752701 0.10896840129551 -0.202433596518422 Q9BR39 JPH2 Q9BR39.T490.p_JPH2 Q9BR39_T490t _1_1_490_490 Q9BR39 Q9BR39 Junctophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8291.8501.3 19.85 12.24 4.637 4 1 1 0 842.4323 2445.3138 T490t TMT10 476 (R) ETPRPEGGSPSPAGtPPQPK (R) ET(0.0)PRPEGGS(0.0)PS(0.0)PAGT(0.99)PPQPK K:TMT10,t:Phosphorylated T JPH2 74448.4 6 5 1028.1 186.58 HUMAN 1 0.3756 -0.7214 GSPSRLKSPSMAVPS-p Q86UU0;S997-p GSPSRLKSPSMAVPS 0.51636083436218 0.180746080305849 -0.09 -0.182 5.29938019319031 9.77166680894747 -0.09 -0.182 0.295163044088493 0.105398230356884 -1.15864902402403 -1.94130216559536 Q86UU0 BCL9L Q86UU0.S997.p_BCL9L Q86UU0_S997s _1_1_997_997 Q86UU0 Q86UU0 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24350.24350.3 14.44 14.44 1.239 4 1 1 0 712.7039 2056.1302 S997s TMT10 997 (K) sPSMAVPSPGWVASPK (T) S(0.99)PS(0.0)MAVPS(0.0)PGWVAS(0.0)PK K:TMT10,s:Phosphorylated S BCL9L 157526.3 3 20 139.1 524.37 HUMAN 1 -5.2994 -9.7717 GSPVLRLSPCLHRSL-p Q9C073;S207-p GSPVLRLSPCLHRSL 0.26937080367531 0.232919094154321 0.177666666666667 0.183333333333333 10.8022423723074 8.3333697170389 0.177666666666667 0.183333333333333 0.0831334421271671 0.146778697095359 2.12149876915106 1.69238744099009 Q9C073 FAM117A Q9C073.S207.p_FAM117A Q9C073_S207s _1_1_207_207 Q9C073 Q9C073 Protein FAM117A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21041.21041.3 14.79 8.68 1.166 5 1 1 0 857.7737 2491.3441 S207s TMT10 192 (R) ASPPSFPSGSPVLRLsPCLHR (S) AS(0.0)PPS(0.0)FPS(0.0)GS(0.0)PVLRLS(0.99)PCLHR C:Carbamidomethylation,s:Phosphorylated S FAM117A 49059.4 2 8 640.1 255.25 HUMAN 1 10.8022 8.3334 GSPYGGGYGSGGGSG-p P51991;Y364-p GSPYGGGYGSGGGSG 0.599304429327995 NA -3.5445 1.395 4.10953742876737 NA -3.5445 NA 0.388191710461494 NA -1.05645941893565 NA P51991 HNRNPA3 P51991.Y364.p_HNRNPA3 P51991_Y364y _1_1_364_364 P51991 P51991 Heterogeneous nuclear ribonucleoprotein A3 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8022.8063.3 19.41 19.41 7.746 9 1 1 0 740.6439 2139.9529 Y364y TMT10 355 (R) SSGSPYGGGyGSGGGSGGYGSR (R) S(0.0)S(0.0)GS(0.0)PY(0.0)GGGY(0.99)GS(0.0)GGGS(0.0)GGY(0.0)GS(0.0)R y:Phosphorylated Y HNRNPA3 39822.5 1 3 62.1 37.54 HUMAN 1 -4.1095 NA GSQDSQPSPLALLAA-p Q02446;S46-p GSQDSQPSPLALLAA 0.484169060421588 0.0430609058980614 0.0926666666666667 0.324666666666667 5.80248933771214 18.2995178163492 0.0926666666666667 0.324666666666667 0.262876077745543 0.014792726180873 1.2492976254708 3.52019501794944 Q02446 SP4 Q02446.S46.p_SP4 Q02446_S46s _1_1_46_46 Q02446 Q02446 Transcription factor Sp4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28371.28371.3 14.88 14.88 4.728 7 1 1 0 886.4484 2577.3594 S46s TMT10 37 (K) TSGSQDSQPsPLALLAATCSK (I) T(0.0)S(0.0)GS(0.0)QDS(0.0)QPS(0.99)PLALLAAT(0.0)CS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SP4 82611.1 2 2 1474.1 139.4 HUMAN 1 5.8025 18.2995 GSQEFLASASASAER-p C9J6P4;S263-p GSQEFLASASASAER 0.80621185033956 0.116621217545853 0.041 -0.181666666666667 1.8038039434578 12.309933324191 0.041 -0.181666666666667 0.660115006354855 0.0587498372130569 0.464900894654809 -2.38620486377406 C9J6P4 ZC3HAV1 C9J6P4.S263.p_ZC3HAV1 C9J6P4_S263s _1_1_263_263 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2|Q7Z2W4-3 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.23964.23964.3 8.01 8.01 2.761 4 1 1 0 748.0161 2162.0716 S263s TMT10 253 (R) FFQGSQEFLAsASASAER (S) FFQGS(0.0)QEFLAS(0.99)AS(0.0)AS(0.0)AER s:Phosphorylated S ZC3HAV1 115909.2 3 3 361.1 343.37 HUMAN 1 1.8038 -12.3099 GSQGEPWTPTANLKM-p A0AVK6;T58-p GSQGEPWTPTANLKM 0.568416688595419 0.00122180865858234 0.0916666666666667 -1.223 4.51656236200035 47.8858252057741 0.0916666666666667 -1.223 0.353462840977444 1.62711211763431e-05 1.01467008217781 -14.3178886605505 A0AVK6 E2F8 A0AVK6.T58.p_E2F8 A0AVK6_T58t _1_1_58_58 A0AVK6 A0AVK6 Transcription factor E2F8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18287.18287.3 16.12 16.12 4.22 3 1 1 0 718.3611 2073.1017 T58t TMT10 50 (K) EGSQGEPWtPTANLK (M) EGS(0.0)QGEPWT(0.99)PT(0.0)ANLK K:TMT10,t:Phosphorylated T E2F8 94792 2 2 1788.1 114.89 HUMAN 1 4.5166 -47.8858 GSQKSTDSPGADAEL-p A0A0J9YWL0;S430-p GSQKSTDSPGADAEL 0.335802616680545 0.668652769499861 0.142333333333333 -0.044 8.84033596658727 2.39208183615272 0.142333333333333 -0.044 0.130606984775011 0.576490050594224 1.7807246646761 -0.5939070717652 A0A0J9YWL0 NotFound A0A0J9YWL0.S430.p_NotFound A0A0J9YWL0_S430s _1_1_430_430 A0A0J9YWL0 A0A0J9YWL0|Q9Y4K1 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21002.21002.5 29.39 29.39 1.321 6 1 1 0 889.6062 4364.0326 S430s TMT10 427 (K) STDsPGADAELPESAARDDAVFDDEVAPNAASDNASAEK (K) S(0.0)T(0.0)DS(0.99)PGADAELPES(0.0)AARDDAVFDDEVAPNAAS(0.0)DNAS(0.0)AEK K:TMT10,s:Phosphorylated S CRYBG1 233643.7 6 11 79.1 640.71 HUMAN 1 8.8403 -2.3921 GSQPGGFSPGQNQVT-p E7EWR4;S544-p GSQPGGFSPGQNQVT 0.354335849545062 0.0366324050433271 0.125666666666667 0.275 8.37409823299953 19.3213152711972 0.125666666666667 0.275 0.145408628004885 0.011691452589674 1.70000263593959 3.73144598608936 E7EWR4 CSTF2 E7EWR4.S544.p_CSTF2 E7EWR4_S544s_1_1_544_544 E7EWR4 E7EWR4|P33240|P33240-2 Cleavage stimulation factor subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15989.15989.4 29.5 29.5 2.378 5 1 1 0 1105.5283 4323.1287 M524m S544s TMT10 520 (R) QVPVmQGTGMQGASIQGGSQPGGFsPGQNQVTPQDHEK (A) Q(0.0)VPVM(0.99)QGT(0.0)GM(0.0)QGAS(0.0)IQGGS(0.0)QPGGFS(0.99)PGQN(0.0)QVT(0.0)PQDHEK K:TMT10,m:Oxidized methionine,s:Phosphorylated S CSTF2 63055.8 49 6 2335.1 87.35 HUMAN 1 8.3741 19.3213 GSQPIRASNPDLRRT-p Q9UKE5;S707-p GSQPIRASNPDLRRT 0.810029994538021 0.262480399157894 -0.0363333333333333 -0.108 1.7582107589078 7.65352070790166 -0.0363333333333334 -0.108 0.667081542189663 0.171651628963633 -0.45456437576041 -1.57451501574741 Q9UKE5 TNIK Q9UKE5.S707.p_TNIK Q9UKE5_S707s _1_1_707_707 Q9UKE5 Q9UKE5|Q9UKE5-4|Q9UKE5-2|Q9UKE5-6|Q9UKE5-3|Q9UKE5-7|Q9UKE5-5|Q9UKE5-8 TRAF2 and NCK-interacting protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12196.12196.2 11.89 6.35 1.318 2 1 1 0 916.9818 1752.9918 S707s TMT10 699 (R) LGSQPIRAsNPDLR (R) LGS(0.0)QPIRAS(0.99)NPDLR s:Phosphorylated S TNIK 155453.9 7 39 131.1 535.29 HUMAN 1 -1.7582 -7.6535 GSQPNSGSPQPAP__-p J3KR72;S729-p GSQPNSGSPQPAP__ 0.333794682857218 0.0137396512046797 0.205666666666667 0.453666666666667 8.89435055420116 25.8666178755601 0.205666666666667 0.453666666666667 0.128992643962008 0.00259022930447373 1.79007449579236 5.2598028995624 J3KR72 NotFound J3KR72.S729.p_NotFound J3KR72_S729s _1_1_729_729 J3KR72 P49848|P49848-2|J3KR72|P49848-3 Transcription initiation factor TFIID subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6938.6938.2 12.43 12.43 2.211 3 1 1 0 859.3909 1637.8081 S729s TMT10 720 (K) ANGSQPNSGsPQPAP (-) ANGS(0.0)QPNS(0.0)GS(0.99)PQPAP s:Phosphorylated S TAF6 79746 4 6 2409.1 84.76 HUMAN 1 8.8944 25.8666 GSQPSSFSPGQSQVT-p Q9H0L4;S563-p GSQPSSFSPGQSQVT 0.693549863312391 0.0340592353542532 0.054 0.263333333333333 2.98103130303201 19.7799870102316 0.054 0.263333333333333 0.503381058557036 0.0105196502025083 0.716556902721109 3.82835934716976 Q9H0L4 CSTF2T Q9H0L4.S563.p_CSTF2T Q9H0L4_S563s _1_1_563_563 Q9H0L4 Q9H0L4 Cleavage stimulation factor subunit 2 tau variant HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11973.11973.2 21.7 21.7 1.351 6 1 1 0 1471.7013 2862.427 S563s TMT10 554 (K) QGGSQPSSFsPGQSQVTPQDQEK (A) QGGS(0.0)QPS(0.0)S(0.0)FS(0.99)PGQS(0.0)QVT(0.0)PQDQEK K:TMT10,s:Phosphorylated S CSTF2T 64663.7 3 6 2570.1 78.15 HUMAN 1 2.981 19.78 GSQSTTISSLSEKSK-p Q13315;S1987-p GSQSTTISSLSEKSK 0.256421439485447 0.988274620784613 0.26 -0.00199999999999996 11.2284637519585 0.0781895073723675 0.26 -0.00199999999999997 0.0753622098487731 0.982157300732533 2.19618359496858 -0.0234143722985286 Q13315 ATM Q13315.S1987.p_ATM Q13315_S1987s _1_1_1987_1987 Q13315 Q13315 Serine-protein kinase ATM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23347.23347.3 22.43 22.43 1.127 8 1 1 0 847.0921 2459.2917 S1987s TMT10 1974 (R) SLAFEEGSQSTTIsSLSEK (S) S(0.0)LAFEEGS(0.0)QS(0.0)T(0.0)T(0.0)IS(0.99)S(0.0)LS(0.0)EK K:TMT10,s:Phosphorylated S ATM 355759 1 6 2613.1 76.72 HUMAN 1 11.2285 -0.0782 GSRAGPLSGKKFGNP-p P17844;S30-p GSRAGPLSGKKFGNP 0.0919189024874469 0.0060596246624617 -0.389 -0.489333333333333 22.0760207024454 32.0052371680448 -0.389 -0.489045905547782 0.00620008908672401 0.000630196930021715 -4.33933497077606 -7.05401821617125 P17844 DDX5 P17844.S30.p_DDX5 P17844_S30s _1_1_30_30 P17844 P17844|J3KTA4|P17844-2|J3QR02|X6RLV5 Probable ATP-dependent RNA helicase DDX5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11209.11209.2 7.63 2.62 99 1 1 1 0 584.3298 1087.6876 S30s TMT10 26 (R) AGPLsGK (K) AGPLS(1.0)GK K:TMT10,s:Phosphorylated S DDX5 69660.3 1 9 2075.1 99 HUMAN 1 -22.076 -32.0052 GSRGLDISHISQRLE-p H3BVG0;S72-p GSRGLDISHISQRLE 0.429386855686088 0.103030569308953 -0.117 -0.179666666666667 6.75908887138567 13.0372363496756 -0.117 -0.179666666666667 0.210907057622951 0.0496908430530385 -1.41877353580932 -2.51639350462575 H3BVG0 NotFound H3BVG0.S72.p_NotFound H3BVG0_S72s _1_1_72_72 H3BVG0 H3BVG0|Q8N1F7 Nuclear pore complex protein Nup93 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13977.13977.3 10.28 10.28 10.277 2 1 1 0 478.9161 1354.764 S72s TMT10 68 (R) GLDIsHISQR (L) GLDIS(0.99)HIS(0.0)QR s:Phosphorylated S NUP93 100351.7 2 4 862.1 210.52 HUMAN 1 -6.7591 -13.0372 GSRKHRMSEEKDCGG-p Q9BXW6;S515-p GSRKHRMSEEKDCGG 0.830364356065644 0.0438410121432512 0.0446666666666667 -0.427666666666667 1.55482400458588 18.193586375445 0.0446666666666667 -0.427666666666667 0.699065065409458 0.0151579811430409 0.407790697810663 -3.49864673741617 Q9BXW6 OSBPL1A Q9BXW6.S515.p_OSBPL1A Q9BXW6_S515s _1_1_515_515 Q9BXW6 Q9BXW6|Q9BXW6-4 Oxysterol-binding protein-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9237.9237.5 12.24 12.24 12.241 2 1 1 0 657.9425 3205.7228 S515s TMT10 512 (K) HRMsEEKDCGGGDALSNGIKK (H) HRMS(0.99)EEKDCGGGDALS(0.0)NGIKK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S OSBPL1A 109837.2 2 4 1553.1 132.3 HUMAN 1 1.5548 -18.1936 GSRKRTISQSSSLKS-p Q9UHB7;S836-p GSRKRTISQSSSLKS 0.00550926337302713 0.000952253650599092 -2.01566666666667 -1.908 61.6257512607493 54.9748514834328 -2.01566666666667 -1.908 6.87740933716769e-07 3.18064245554661e-06 -25.9676475320432 -19.4470629668914 Q9UHB7 AFF4 Q9UHB7.S836.p_AFF4 Q9UHB7_S836s _1_1_836_836 Q9UHB7 Q9UHB7|Q9UHB7-2 AF4/FMR2 family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12599.12599.2 13 6.19 2.191 5 1 1 0 744.9071 1408.8412 S836s TMT10 834 (R) TIsQSSSLK (S) T(0.0)IS(0.99)QS(0.0)S(0.0)S(0.0)LK K:TMT10,s:Phosphorylated S AFF4 127856.3 3 19 137.1 525.98 HUMAN 1 -61.6258 -54.9749 GSRLHLGSARRAAGS-p O95613;S2956-p GSRLHLGSARRAAGS 0.284101767600348 0.0237673258330995 0.236333333333333 -0.516333333333333 10.3104317450056 22.1461101228794 0.236333333333333 -0.516333333333333 0.0931015315877457 0.00610083090176693 2.03569845283139 -4.35078090507577 O95613 PCNT O95613.S2956.p_PCNT O95613_S2956s _1_1_2956_2956 O95613 O95613|O95613-2 Pericentrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6504.6504.3 8.43 2.36 99 1 1 1 0 406.8939 1138.7006 S2956s TMT10 2952 (R) LHLGsARR (A) LHLGS(1.0)ARR s:Phosphorylated S PCNT 380826.2 3 17 222.1 428 HUMAN 1 10.3104 -22.1461 GSRRGHVTPNLSRAS-p Q96CP6;T277-p GSRRGHVTPNLSRAS 0.813083216141779 0.0663304148064582 0.0403333333333333 -0.222333333333333 1.72694606388379 15.6735397680803 0.0403333333333333 -0.222333333333333 0.671901164232828 0.0270798355841423 0.447445684916196 -3.00368556469416 Q96CP6 GRAMD1A Q96CP6.T277.p_GRAMD1A Q96CP6_T277t _1_1_277_277 Q96CP6 M0QZ12|Q96CP6|Q96CP6-3|Q96CP6-2 GRAM domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5848.5848.2 12.07 8.78 8.424 2 1 1 0 645.3327 1209.6901 T277t TMT10 274 (R) GHVtPNLSR (A) GHVT(0.99)PNLS(0.0)R t:Phosphorylated T GRAMD1A 81363.3 4 7 1250.1 161.94 HUMAN 1 1.7269 -15.6735 GSRRGRSSLSLAKSV-p V9GYM8;S188-p GSRRGRSSLSLAKSV 0.293818205231031 0.799986172313963 -0.181666666666667 -0.0296666666666666 10.0395535014668 1.35546501718846 -0.181666666666667 -0.0296666666666666 0.0990933817647562 0.731902951107002 -1.98858310446638 -0.360773281891853 V9GYM8 NotFound V9GYM8.S188.p_NotFound V9GYM8_S188s _1_1_188_188 V9GYM8 V9GYM8|Q92974|Q92974-2|Q92974-3 Rho guanine nucleotide exchange factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14676.14676.2 8.7 8.7 1.401 3 1 1 0 622.3577 1163.74 S188s TMT10 187 (R) SsLSLAK (S) S(0.0)S(0.99)LS(0.0)LAK K:TMT10,s:Phosphorylated S ARHGEF2 117095.6 2 8 380.1 335.31 HUMAN 1 -10.0396 -1.3555 GSRSQTPSPSTLNID-p Q6GYQ0-2;S1004-p GSRSQTPSPSTLNID 0.349328106249248 0.20297037548925 -0.138 0.145666666666667 8.48505409184463 9.10977653072452 -0.138 0.145666666666667 0.141740705737558 0.122750239153098 -1.71921856920368 1.82670162565505 Q6GYQ0 RALGAPA1 Q6GYQ0.2.S1004.p_RALGAPA1 Q6GYQ0-2_T1002tS1004s_2_2_1002_1004 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7|Q6GYQ0-4|Q6GYQ0-3 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17760.17760.3 16.2 16.2 1.258 5 2 2 0 844.3929 2371.2328 T1002t S1004s TMT10 1000 (R) SQtPsPSTLNIDHMEQK (D) S(0.0)QT(0.99)PS(0.99)PS(0.0)T(0.0)LNIDHMEQK K:TMT10,t:Phosphorylated T,s:Phosphorylated S RALGAPA1 236609.9 1 21 317.1 366.49 HUMAN 1 -8.4851 9.1098 GSRSRTPSLPTPPTR-p P10636;S531-p GSRSRTPSLPTPPTR 0.315304354297626 0.0345299216923991 -0.223666666666667 0.364 9.38021666949998 19.692598169019 -0.223666666666667 0.364 0.115339571347804 0.0107334708976531 -1.87420286556823 3.80979175893419 P10636 MAPT P10636.S531.p_MAPT P10636_S531s _1_1_531_531 P10636 P10636-9|A0A0G2JMX7|A0A0G2JS76|P10636-4|P10636-2|I3L170|P10636-3 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12989.12989.4 9.2 9.2 1.366 4 1 1 0 579.8384 2236.3632 S531s TMT10 529 (R) TPsLPTPPTREPKK (V) T(0.0)PS(0.99)LPT(0.0)PPT(0.0)REPKK K:TMT10,s:Phosphorylated S MAPT 79154.4 2 15 119.1 551.6 HUMAN 1 -9.3802 19.6926 GSRSSINSVDGESPN-p Q9NUY8;S469-p GSRSSINSVDGESPN 0.149081489852703 0.0096675336523445 0.249666666666667 0.415333333333333 16.6708646804393 28.3935884589461 0.249666666666667 0.415333333333333 0.021523531584848 0.00144757526660017 3.19808690305396 5.94910157899996 Q9NUY8 TBC1D23 Q9NUY8.S469.p_TBC1D23 Q9NUY8_S469s _1_1_469_469 Q9NUY8 Q9NUY8 TBC1 domain family member 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8283.8283.2 12.73 12.73 3.836 6 1 1 0 1008.9399 1936.9046 S469s TMT10 465 (R) SSINsVDGESPNGSSDR (G) S(0.0)S(0.0)INS(0.99)VDGES(0.0)PNGS(0.0)S(0.0)DR s:Phosphorylated S TBC1D23 79176.3 1 3 2254.1 91.17 HUMAN 1 16.6709 28.3936 GSRVPGGSPLGVSLV-p I3L2J0;S1630-p GSRVPGGSPLGVSLV 0.724609771205444 0.978108959441114 -0.0566666666666667 -0.003 2.64858646516037 0.137881345243113 -0.0566666666666667 -0.00300000000000001 0.543427176532778 0.968750334508178 -0.64808552057437 -0.0410170613149001 I3L2J0 NotFound I3L2J0.S1630.p_NotFound I3L2J0_S1630s _1_1_1630_1630 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21751.21751.3 17.94 17.94 7.66 4 1 1 0 747.7491 2161.2633 S1630s Hydrogen 1626 (R) VPGGsPLGVSLVYSDKK (S) VPGGS(0.99)PLGVS(0.0)LVY(0.0)S(0.0)DKK K:TMT10-Lys-Only,s:Phosphorylated S CIC 259056.7 8 27 23.1 999.57 HUMAN 1 -2.6486 -0.1379 GSRVRRVSVAHFGSR-p Q6P1M3;S847-p GSRVRRVSVAHFGSR 0.59002623755122 0.692121282207408 -0.126333333333333 -0.0663333333333333 4.22228697325636 2.19286554167066 -0.126333333333333 -0.0663333333333334 0.378243351186505 0.60355026623555 -0.959388559526781 -0.551035877519428 Q6P1M3 LLGL2 Q6P1M3.S847.p_LLGL2 Q6P1M3_S847s _1_1_847_847 Q6P1M3 Q6P1M3|J3QRV5|Q6P1M3-2 Lethal(2) giant larvae protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7473.7473.3 12.27 12.27 12.268 2 1 1 0 475.5841 1344.7698 S847s TMT10 845 (R) RVsVAHFGSR (R) RVS(0.99)VAHFGS(0.0)R s:Phosphorylated S LLGL2 114415.8 2 9 881.1 207.2 HUMAN 1 -4.2223 -2.1929 GSSAARWSDQGPAQT-p Q9C0C2;S1533-p GSSAARWSDQGPAQT 0.104697003168653 0.0479454706867922 -0.423 -0.323333333333333 20.6683057055224 17.6468242061683 -0.423 -0.323333333333333 0.00857372262965665 0.017191650731924 -4.0238666415513 -3.38843302535119 Q9C0C2 TNKS1BP1 Q9C0C2.S1533.p_TNKS1BP1 Q9C0C2_S1533s _1_1_1533_1533 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9317.9317.2 16.03 16.03 6.616 3 1 1 0 771.3498 1461.7284 S1533s TMT10 1532 (R) WsDQGPAQTSR (R) WS(0.99)DQGPAQT(0.0)S(0.0)R s:Phosphorylated S TNKS1BP1 182819.3 3 62 4.1 2105.7 HUMAN 1 -20.6683 -17.6468 GSSAPEHSPRTSGLG-p O75385;S544-p GSSAPEHSPRTSGLG 0.066704952367969 0.00527538332828748 -0.468666666666667 -0.546333333333333 25.3615470057343 33.0978748463797 -0.468666666666667 -0.546333333333333 0.00290968047257277 0.000490018543790323 -5.13593219584448 -7.41952078572484 O75385 ULK1 O75385.S544.p_ULK1 O75385_S544s _1_1_544_544 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.2523.2523.3 17.09 17.09 6.176 4 1 1 0 514.5672 1461.7193 S544s Hydrogen 533 (R) SPRPGSSAPEHsPR (T) S(0.0)PRPGS(0.0)S(0.0)APEHS(0.99)PR s:Phosphorylated S ULK1 113656.3 3 10 351.1 351.01 HUMAN 1 -25.3615 -33.0979 GSSEAAGSPEWGGRP-p Q92994;S398-p GSSEAAGSPEWGGRP 0.572664711568272 0.327168068270299 0.113333333333333 -0.146 4.45814947333245 6.42452121366684 0.113333333333333 -0.146 0.358249054332449 0.227796936189816 1.00375321922686 -1.3595076803983 Q92994 BRF1 Q92994.S398.p_BRF1 Q92994_S398s _1_1_398_398 Q92994 Q92994|Q92994-5|Q92994-8 Transcription factor IIIB 90 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36302.36302.4 29.72 29.06 3.042 8 1 1 0 1159.8457 4556.3834 S398s TMT10 384 (R) ELLGGAPGSSEAAGsPEWGGRPPALGSLLDPLPTAASLGISDSIR (E) ELLGGAPGS(0.0)S(0.0)EAAGS(0.99)PEWGGRPPALGS(0.0)LLDPLPT(0.0)AAS(0.0)LGIS(0.0)DS(0.0)IR s:Phosphorylated S BRF1 74808.7 1 2 1800.1 114.18 HUMAN 1 4.4581 -6.4245 GSSEQAESDNMDVPP-p Q12906-7;S62-p GSSEQAESDNMDVPP 0.202779372132916 0.0162800885233095 -0.327666666666667 0.585333333333333 13.4473934235472 24.6984843248768 -0.327666666666667 0.585333333333333 0.0452127223572193 0.00338962432403003 -2.59200602938381 4.96171951913852 Q12906 ILF3 Q12906.7.S62.p_ILF3 Q12906-7_S62s_1_1_62_62 Q12906-7 Q12906-7|Q12906-3|Q12906-6|Q12906-2|Q12906-4|Q12906-5 Isoform 7 of Interleukin enhancer-binding factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9280.9280.4 22.3 18.03 4.472 4 1 1 0 905.6602 3523.6585 S62s M65m TMT10 55 (K) GSSEQAEsDNmDVPPEDDSKEGAGEQK (T) GS(0.0)S(0.0)EQAES(0.99)DNM(1.0)DVPPEDDS(0.0)KEGAGEQK K:TMT10,s:Phosphorylated S,m:Oxidized methionine ILF3 96205.6 11 5 130.1 537.24 HUMAN 1 -13.4474 24.6985 GSSERLGSWQEKEED-p Q6ZUM4;S638-p GSSERLGSWQEKEED 0.650567073565383 0.423980817250965 -0.071 -0.0896666666666667 3.50198177313711 4.96143024855482 -0.071 -0.0896666666666667 0.44647980793583 0.319048696888425 -0.820649736870087 -1.09676499939469 Q6ZUM4 ARHGAP27 Q6ZUM4.S638.p_ARHGAP27 Q6ZUM4_S638s _1_1_638_638 Q6ZUM4 Q6ZUM4|A0A0G2JNY3|E9PIR1|A0A0G2JRG8|Q6ZUM4-3|E9PNT2|Q6ZUM4-2|A0A0C4DGE6 Rho GTPase-activating protein 27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25499.25499.5 17.88 12.88 11.346 3 1 1 0 801.4232 3923.1118 S638s TMT10 636 (R) LGsWQEKEEDARPNAAAPALGPVGLESDLSK (V) LGS(0.99)WQEKEEDARPNAAAPALGPVGLES(0.0)DLS(0.0)K K:TMT10,s:Phosphorylated S ARHGAP27 99078.8 3 11 467.1 303.27 HUMAN 1 -3.502 -4.9614 GSSGNRRSPVSSSKG-p Q14686;S1809-p GSSGNRRSPVSSSKG 0.168689953351787 0.693053166583145 0.244 0.151666666666667 15.4263882061632 2.18557147271434 0.244 0.151666666666667 0.028665609435751 0.604564793572321 2.95880976698696 0.549450937120376 Q14686 NCOA6 Q14686.S1809.p_NCOA6 Q14686_S1809s _1_1_1809_1809 Q14686 Q14686 Nuclear receptor coactivator 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4119.4119.2 9.84 9.84 4.243 4 1 1 0 500.7494 920.525 S1809s Hydrogen 1809 (R) sPVSSSK (G) S(0.99)PVS(0.0)S(0.0)S(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S NCOA6 219484.1 3 11 327.1 360.02 HUMAN 1 15.4264 2.1856 GSSGRRVTQVVRDFL-p Q9ULW8;T443-p GSSGRRVTQVVRDFL 0.17801215785102 0.0520812141695471 0.218666666666667 0.340666666666667 14.8236731593531 17.1261993149659 0.218666666666667 0.340666666666667 0.0329331053986418 0.0193811734614046 2.84544588331066 3.28500589950385 Q9ULW8 PADI3 Q9ULW8.T443.p_PADI3 Q9ULW8_T443t _1_1_443_443 Q9ULW8 Q9ULW8 Protein-arginine deiminase type-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6268.6268.3 7.18 7.18 99 1 1 1 0 389.5581 1086.6945 T443t TMT10 441 (R) RVtQVVR (D) RVT(1.0)QVVR t:Phosphorylated T PADI3 76111.2 1 1 7243.1 7.18 HUMAN 1 14.8237 17.1262 GSSPNSVSELSLASL-p Q5M775;S366-p GSSPNSVSELSLASL 0.625010568942101 0.0310889125388133 0.0836666666666667 -0.29 3.79144810265426 20.3703815205496 0.0836666666666667 -0.29 0.417691069366966 0.00918251926020898 0.877048750870536 -3.95510420766413 Q5M775 SPECC1 Q5M775.S366.p_SPECC1 Q5M775_S366sS369s_2_2_366_369 Q5M775 Q5M775|Q5M775-4 Cytospin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26939.26939.3 15.23 15.23 3.495 9 2 2 0 948.4493 2683.386 S366s S369s TMT10 355 (K) CSTAGSSPNSVsELsLASLTEK (I) CS(0.0)T(0.0)AGS(0.0)S(0.0)PNS(0.0)VS(0.99)ELS(0.99)LAS(0.0)LT(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SPECC1 119267.5 1 26 330.1 358.68 HUMAN 1 3.7914 -20.3704 GSSRPVWSDDDWLKK-p Q9UNP9-3;S97-p GSSRPVWSDDDWLKK 0.823750744244944 0.113503721070607 -0.0386666666666667 -0.169333333333333 1.62360175530291 12.4629108724451 -0.0386666666666667 -0.169333333333333 0.688081409785827 0.0567164334302209 -0.423732670496415 -2.4134623148951 Q9UNP9 PPIE Q9UNP9.3.S97.p_PPIE Q9UNP9-3_S97s _1_1_97_97 Q9UNP9-3 Q9UNP9-3|Q9UNP9-2|E9PK21 Isoform 3 of Peptidyl-prolyl cis-trans isomerase E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20005.20005.5 15.12 15.12 2.156 3 1 1 0 629.3488 3062.7445 S97s TMT10 87 (R) IKEGSSRPVWsDDDWLKK (F) IKEGS(0.0)S(0.0)RPVWS(0.99)DDDWLKK K:TMT10,s:Phosphorylated S PPIE 35219 7 1 3173.1 58.72 HUMAN 1 -1.6236 -12.4629 GSSRTPMSVLQQAGG-p Q9UQ35;S2147-p GSSRTPMSVLQQAGG 0.974846454002394 0.0448317344304111 0.00499999999999999 0.385666666666667 0.215812311922603 18.0481917172242 0.005 0.385666666666667 0.951521857171028 0.0156740355799194 0.0636660587926349 3.46917521170318 Q9UQ35 SRRM2 Q9UQ35.S2147.p_SRRM2 Q9UQ35_S2147s _1_1_2147_2147 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29295.29295.3 19.67 19.67 2.416 3 1 1 0 776.0241 2246.0929 S2147s TMT10 2144 (R) TPMsVLQQAGGSMMDGPGPR (I) T(0.0)PMS(0.99)VLQQAGGS(0.0)MMDGPGPR s:Phosphorylated S SRRM2 300351.7 2 137 2.1 3310.34 HUMAN 1 0.2158 18.0482 GSSSSILSASSESSE-p P25054;S2575-p GSSSSILSASSESSE 0.344105576941701 0.381883214214406 0.157 -0.095 8.60381730093145 5.55436259214126 0.157 -0.0949999999999999 0.137917148681028 0.278332384837454 1.73978160035351 -1.20448110431198 P25054 APC P25054.S2575.p_APC P25054_S2575s _1_1_2575_2575 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13492.13492.3 8.76 8.76 1.349 10 1 1 0 728.0233 2102.0865 S2575s TMT10 2567 (R) TGSSSSILsASSESSEK (A) T(0.0)GS(0.0)S(0.0)S(0.0)S(0.0)ILS(0.99)AS(0.0)S(0.0)ES(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S APC 313808.5 1 47 33.1 890.71 HUMAN 1 8.6038 -5.5544 GSSSSSSYGSGRRF_-p P09651;Y366-p GSSSSSSYGSGRRF_ 0.181858235181653 0.0912971014250874 1.15233333333333 0.904 14.5745997961128 13.7496044765828 1.15233333333333 0.904 0.034877072199871 0.0421734910188112 2.79904123310003 2.83004474683886 P09651 HNRNPA1 P09651.Y366.p_HNRNPA1 P09651_Y366y _1_1_366_366 P09651 P09651|P09651-2|F8W6I7|P09651-3 Heterogeneous nuclear ribonucleoprotein A1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.4880.4880.3 18.42 18.42 1.333 9 1 1 0 668.6149 1923.863 Y366y TMT10 353 (R) NQGGYGGSSSSSSyGSGR (R) NQGGY(0.0)GGS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)Y(0.99)GS(0.0)GR y:Phosphorylated Y HNRNPA1 38860.1 1 5 7.1 110.22 HUMAN 1 14.5746 13.7496 GSSTRKDSIPQVLLP-p Q15052;S684-p GSSTRKDSIPQVLLP 0.301887758255495 0.038752773372719 -0.175666666666667 0.614 9.74824755591654 18.9552106800881 -0.175666666666667 0.614 0.105968123636393 0.0127197604390792 -1.93800376455861 3.65503369267187 Q15052 ARHGEF6 Q15052.S684.p_ARHGEF6 Q15052_S684s _1_1_684_684 Q15052 Q15052|Q15052-2 Rho guanine nucleotide exchange factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22198.22198.4 16.79 16.79 99 1 1 1 0 598.8384 2312.368 S684s TMT10 682 (R) KDsIPQVLLPEEEK (L) KDS(1.0)IPQVLLPEEEK K:TMT10,s:Phosphorylated S ARHGEF6 88752.5 7 23 434.2 313.68 HUMAN 1 -9.7482 18.9552 GSSTTRLTQGIGRSQ-p Q7Z6Z7;T2540-p GSSTTRLTQGIGRSQ 0.42706404984127 0.674508764090572 -0.197666666666667 -0.102333333333333 6.80638920611568 2.33726526585104 -0.197666666666667 -0.102333333333333 0.208622468285975 0.583812612907558 -1.42707826712918 -0.582188980248912 Q7Z6Z7 HUWE1 Q7Z6Z7.T2540.p_HUWE1 Q7Z6Z7_T2540t _1_1_2540_2540 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10391.10391.2 9.79 4.07 99 1 1 1 0 527.287 973.5992 T2540t TMT10 2539 (R) LtQGIGR (S) LT(1.0)QGIGR t:Phosphorylated T HUWE1 485818.9 1 30 11.1 1210.45 HUMAN 1 -6.8064 -2.3373 GSSVSLNSNDSAMLK-p O43166;S126-p GSSVSLNSNDSAMLK 0.701612625583825 0.88733109138329 0.0816666666666667 0.017 2.89303248555355 0.73045407405339 0.0816666666666667 0.017 0.513684843007132 0.845190472145397 0.698600969363725 0.204808837249614 O43166 SIPA1L1 O43166.S126.p_SIPA1L1 O43166_S123sS126s_2_2_123_126 O43166 O43166|O43166-2|O43166-3 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20797.20797.3 15.32 15.32 2.354 8 2 2 0 905.0923 2553.3231 S123s S126s TMT10 113 (K) SSPVSQGSSVsLNsNDSAMLK (S) S(0.0)S(0.0)PVS(0.0)QGS(0.0)S(0.0)VS(0.99)LNS(0.99)NDS(0.0)AMLK K:TMT10,s:Phosphorylated S SIPA1L1 201223.1 1 33 46.1 777.88 HUMAN 1 2.893 0.7305 GSTGVIKSPSWQRPN-p Q96HC4;S360-p GSTGVIKSPSWQRPN 0.851272733497355 0.0881755048730127 0.0273333333333333 0.239333333333333 1.353386959671 13.9605295365891 0.0273333333333333 0.239333333333333 0.732253243461107 0.0401741823359167 0.360314720120777 2.6840698860881 Q96HC4 PDLIM5 Q96HC4.S360.p_PDLIM5 Q96HC4_S360s _1_1_360_360 Q96HC4 Q96HC4-6|Q96HC4-4|Q96HC4-7|A0A0A0MSP3 PDZ and LIM domain protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8337.8337.3 9.86 3.21 4.538 4 1 1 0 688.3344 1983.0358 S360s TMT10 360 (K) sPSWQRPNQGVPSTGR (I) S(0.99)PS(0.0)WQRPNQGVPS(0.0)T(0.0)GR s:Phosphorylated S PDLIM5 65142.1 1 6 2505.1 80.72 HUMAN 1 1.3534 13.9605 GSTKRRKSMSGASPK-p P30304;S293-p GSTKRRKSMSGASPK 0.164162708749184 0.000993050805672115 -0.239 -1.378 15.7208935339936 52.4864065259241 -0.239 -1.378 0.0267861715923404 5.6410421839202e-06 -3.01478049720373 -17.4713153867569 P30304 CDC25A P30304.S293.p_CDC25A P30304_S293s _1_1_293_293 P30304 P30304|P30304-2 M-phase inducer phosphatase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7627.7627.2 10.44 10.44 2.143 3 1 1 0 651.8306 1222.6866 S293s TMT10 293 (K) sMSGASPK (E) S(0.99)MS(0.0)GAS(0.0)PK K:TMT10,s:Phosphorylated S CDC25A 59770.4 1 1 4711.1 27.6 HUMAN 1 -15.7209 -52.4864 GSTSLSHSPGCSSTQ-p Q96JN0-3;S101-p GSTSLSHSPGCSSTQ 0.059451744552319 0.927287346008405 0.411333333333333 0.01 26.7874190191201 0.462959373959609 0.411333333333333 0.01 0.00209535734170332 0.898884853742302 5.51119067311045 0.133139607022501 Q96JN0 LCOR Q96JN0.3.S101.p_LCOR Q96JN0-3_S101s _1_1_101_101 Q96JN0-3 Q96JN0-3 Isoform 3 of Ligand-dependent corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6947.6947.4 19.61 19.61 1.189 11 1 1 0 948.4458 3710.7953 S101s TMT10 89 (K) KSPCAGSTSLSHsPGCSSTQGNGENSTEAK (A) KS(0.0)PCAGS(0.0)T(0.0)S(0.0)LS(0.0)HS(0.99)PGCS(0.0)S(0.0)T(0.0)QGNGENS(0.0)T(0.0)EAK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S LCOR 172300.7 1 5 673.1 247.79 HUMAN 1 26.7874 0.463 GSTSRRQSVSPPYKE-p Q9NYV4-2;S274-p GSTSRRQSVSPPYKE 0.899952874829119 0.208448492321714 -0.0296666666666667 0.176 0.895503941037967 8.95929288143984 -0.0296666666666667 0.176 0.813672439426061 0.127078099701026 -0.247457309442674 1.80067159237964 Q9NYV4 CDK12 Q9NYV4.2.S274.p_CDK12 Q9NYV4-2_S274sS276s_2_2_274_276 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10185.10393.4 10 5.6 7.718 8 2 2 0 697.339 2626.3989 S274s S276s TMT10 272 (R) RQsVsPPYKEPSAYQSSTR (S) RQS(0.99)VS(0.99)PPY(0.0)KEPS(0.0)AY(0.0)QS(0.0)S(0.0)T(0.0)R K:TMT10,s:Phosphorylated S CDK12 163853.1 4 36 59.1 708.76 HUMAN 1 -0.8955 8.9593 GSTTSIPSPQSDGGD-p Q8IYB1;S439-p GSTTSIPSPQSDGGD 0.788490321907373 0.0739383250671688 0.0776666666666667 -0.202666666666667 1.98987564236266 15.013965193904 0.0776666666666667 -0.202666666666667 0.632429960372058 0.0315212535681084 0.506558759779978 -2.879189829264 Q8IYB1 MB21D2 Q8IYB1.S439.p_MB21D2 Q8IYB1_S439s _1_1_439_439 Q8IYB1 Q8IYB1 Protein MB21D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10095.10095.4 18.93 14.27 4.812 6 1 1 0 809.3983 3154.6129 S439s TMT10 431 (R) RGSTTSIPsPQSDGGDPNQPDDRLAK (K) RGS(0.0)T(0.0)T(0.0)S(0.0)IPS(0.99)PQS(0.0)DGGDPNQPDDRLAK K:TMT10,s:Phosphorylated S MB21D2 56426.8 1 2 5480.1 18.93 HUMAN 1 1.9899 -15.014 GSVERMGSGIERMGP-p P52272;S452-p GSVERMGSGIERMGP 0.110359072225873 0.00804251812163316 0.328 0.532333333333333 20.0312618494057 29.8466977610996 0.328 0.532333333333333 0.00992827538916186 0.00103592955560118 3.88566271013818 6.37557851728513 P52272 HNRNPM P52272.S452.p_HNRNPM P52272_S452s _1_1_452_452 P52272 P52272|A0A087X0X3|P52272-2 Heterogeneous nuclear ribonucleoprotein M HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8022.8022.2 9.43 3.54 99 1 1 1 0 529.7489 978.524 S452s TMT10 450 (R) MGsGIER (M) MGS(1.0)GIER s:Phosphorylated S HNRNPM 77799.7 1 7 830.1 216.57 HUMAN 1 20.0313 29.8467 GSVLNWFSPVQALQK-p Q6P996;S652-p GSVLNWFSPVQALQK 0.282638717736522 0.00274324290825798 -0.154 -0.906666666666667 10.3718535378337 38.8132037357205 -0.154 -0.906666666666667 0.0917940742315892 0.000131425496516396 -2.04639471956866 -9.61016092839574 Q6P996 PDXDC1 Q6P996.S652.p_PDXDC1 Q6P996_S652s _1_1_652_652 Q6P996 H3BND4|Q6P996|Q6P996-5|Q6P996-4|Q6P996-3 Pyridoxal-dependent decarboxylase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.37053.37053.3 24.3 24.3 7.448 2 1 1 0 916.8467 2668.5591 S652s TMT10 640 (R) QIPVVGSVLNWFsPVQALQK (G) QIPVVGS(0.0)VLNWFS(0.99)PVQALQK K:TMT10,s:Phosphorylated S PDXDC1 87618.2 5 10 600.1 263.32 HUMAN 1 -10.3719 -38.8132 GSVPKNTSQTAAITT-p Q6IN85;S789-p GSVPKNTSQTAAITT 0.177205134669313 0.502982772348061 0.330666666666667 -0.107333333333333 14.8915714791947 3.99698158086623 0.330666666666667 -0.107333333333333 0.0324222277438819 0.398383957856269 2.85813994326344 -0.916397463316 Q6IN85 PPP4R3A Q6IN85.S789.p_PPP4R3A Q6IN85_S789s _1_1_789_789 Q6IN85 Q6IN85-2|Q6IN85-4 Serine/threonine-protein phosphatase 4 regulatory subunit 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10489.10489.2 12.65 12.65 1.103 5 1 1 0 837.4469 1593.9212 S789s TMT10 787 (K) NTsQTAAITTK (G) NT(0.0)S(0.99)QT(0.0)AAIT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S PPP4R3A 95994.2 2 9 842.1 214.14 HUMAN 1 14.8916 -3.997 GSVPLSSSPPATHFP-p P11388-2;S1419-p GSVPLSSSPPATHFP 0.522932385009279 0.37236988138142 -0.113333333333333 -0.0926666666666666 5.20764188134934 5.69126413809415 -0.113333333333333 -0.0926666666666666 0.301464246104587 0.269695429262849 -1.14197701189244 -1.22908494495087 P11388 TOP2A P11388.2.S1419.p_TOP2A P11388-2_S1418sS1419s_2_2_1418_1419 P11388-2 P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25785.25785.5 16.89 14.62 1.111 9 2 2 0 1034.1327 5006.702 S1418s S1419s TMT10 1400 (K) SVVSDLEADDVKGSVPLSssPPATHFPDETEITNPVPKK (N) S(0.0)VVS(0.0)DLEADDVKGS(0.0)VPLS(0.0)S(0.99)S(0.99)PPAT(0.0)HFPDET(0.0)EIT(0.0)NPVPKK K:TMT10,s:Phosphorylated S TOP2A 178239.3 18 22 71.2 658.36 HUMAN 1 -5.2076 -5.6913 GSVPRHVSPVTPPRE-p Q13443;S758-p GSVPRHVSPVTPPRE 0.648181670470262 0.214856163721283 0.0903333333333333 -0.128 3.52759020610778 8.7876655146105 0.0903333333333334 -0.128 0.443854859824699 0.132200606792591 0.825677604752221 -1.77098681601945 Q13443 ADAM9 Q13443.S758.p_ADAM9 Q13443_S758s _1_1_758_758 Q13443 Q13443 Disintegrin and metalloproteinase domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13633.13633.4 16.4 15.48 4.088 3 1 1 0 561.0483 2161.2079 S758s TMT10 756 (R) HVsPVTPPREVPIYANR (F) HVS(0.99)PVT(0.0)PPREVPIY(0.0)ANR s:Phosphorylated S ADAM9 93064.8 7 3 2476.1 81.85 HUMAN 1 3.5276 -8.7877 GSVQRVPSGAAGGKM-p A0A0G2JPP5;S1285-p GSVQRVPSGAAGGKM 0.911908538141734 0.0393465291354279 -0.0203333333333333 -0.405 0.779424349396106 18.8545072922786 -0.0203333333333333 -0.405 0.835713783456789 0.0130181499830271 -0.217595815397463 -3.6341585865904 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1285.p_SCRIB A0A0G2JPP5_S1285s _1_1_1285_1285 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15816.15816.3 17.02 12.66 2.928 3 1 1 0 830.4594 2409.3978 S1285s TMT10 1270 (R) ALAAVPSAGSVQRVPsGAAGGK (M) ALAAVPS(0.0)AGS(0.0)VQRVPS(0.99)GAAGGK K:TMT10,s:Phosphorylated S SCRIB 178690.9 3 28 22.1 1004.81 HUMAN 1 -0.7794 -18.8545 GSVRHSTSPASSEYS-p Q96N46;S671-p GSVRHSTSPASSEYS 0.233628206047255 0.139044516116782 0.279666666666667 0.309 12.1080051329836 11.2884772374825 0.279666666666667 0.309 0.06154595099512 0.0743279707653282 2.35150642874795 2.20570268596711 Q96N46 TTC14 Q96N46.S671.p_TTC14 Q96N46_S671s _1_1_671_671 Q96N46 Q96N46 Tetratricopeptide repeat protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11159.11159.2 10.96 10.96 1.11 7 1 1 0 1002.9763 1924.9805 S671s TMT10 668 (R) HSTsPASSEYSWK (S) HS(0.0)T(0.0)S(0.99)PAS(0.0)S(0.0)EY(0.0)S(0.0)WK K:TMT10,s:Phosphorylated S TTC14 88830.6 3 2 5015.1 23.9 HUMAN 1 12.108 11.2885 GSVSEDNSEDEISNL-p Q13085;S29-p GSVSEDNSEDEISNL 0.696962530863545 0.257768360270633 -0.0876666666666667 -0.146333333333333 2.94492805032898 7.7576945505261 -0.0876666666666667 -0.146333333333333 0.507583148101438 0.167583225442084 -0.709204195644514 -1.59260809966446 Q13085 ACACA Q13085.S29.p_ACACA Q13085_S29s _1_1_29_29 Q13085 Q13085-4|A0A087WYK6|A0A087X126|A0A087X2F8 Acetyl-CoA carboxylase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37221.37221.4 27.33 27.33 4.811 4 1 1 0 951.5009 3723.0195 S29s TMT10 19 (R) FIIGSVSEDNsEDEISNLVKLDLLEEK (E) FIIGS(0.0)VS(0.0)EDNS(0.99)EDEIS(0.0)NLVKLDLLEEK K:TMT10,s:Phosphorylated S ACACA 267260.7 21 2 860.1 210.55 HUMAN 1 -2.9449 -7.7577 GSVSQPSTPSPPKPT-p J3KNL6;T593-p GSVSQPSTPSPPKPT 0.706604154820368 0.0421452777646216 -0.0513333333333333 0.247333333333333 2.83272571904404 18.4259683332039 -0.0513333333333334 0.247333333333333 0.520867701508107 0.0143682265365924 -0.686227282984858 3.54600191857488 J3KNL6 SEC16A J3KNL6.T593.p_SEC16A J3KNL6_T593tS595s_2_2_593_595 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25772.25772.3 10.08 8.72 1.112 10 2 2 0 1302.9891 3747.0208 T593t S595s TMT10 586 (R) GSVSQPStPsPPKPTGIFQTSANSSFEPVK (S) GS(0.0)VS(0.0)QPS(0.0)T(0.99)PS(0.99)PPKPT(0.0)GIFQT(0.0)S(0.0)ANS(0.0)S(0.0)FEPVK K:TMT10,t:Phosphorylated T,s:Phosphorylated S SEC16A 253486.5 19 50 15.1 1143.82 HUMAN 1 -2.8327 18.426 GSVSSSETPPPPPPP-p P55010;T178-p GSVSSSETPPPPPPP 0.923317196966323 0.0350243231477231 -0.0246666666666667 0.448666666666667 0.681284948418804 19.5974403017305 -0.0246666666666667 0.448666666666667 0.854813761455714 0.0109712464244418 -0.19190341681513 3.78962903097945 P55010 EIF5 P55010.T178.p_EIF5 P55010_T178t _1_1_178_178 P55010 P55010 Eukaryotic translation initiation factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15907.15907.5 26.83 26.83 2.28 8 1 1 0 1087.8751 5355.3618 T178t TMT10 169 (K) ENGSVSSSEtPPPPPPPNEINPPPHTMEEEEDDDWGEDTTEEAQRR (R) ENGS(0.0)VS(0.0)S(0.0)S(0.0)ET(0.99)PPPPPPPNEINPPPHT(0.0)MEEEEDDDWGEDT(0.0)T(0.0)EEAQRR t:Phosphorylated T EIF5 49678.3 5 4 980.1 192.67 HUMAN 1 -0.6813 19.5974 GSVTEHPSPSPLLSS-p P07910;S113-p GSVTEHPSPSPLLSS 0.79813572883131 0.263689113542103 0.0536666666666667 -0.116 1.88728449721152 7.62693956212869 0.0536666666666667 -0.116 0.647547379604049 0.172705450452604 0.483693122388509 -1.5698960317333 P07910 HNRNPC P07910.S113.p_HNRNPC P07910_S113s _1_1_113_113 P07910 P07910|G3V2Q1|G3V576 Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28849.28849.5 22.35 22.35 1.101 12 1 1 0 891.7993 4374.9975 S113s TMT10 100 (R) SAAEMYGSVTEHPsPSPLLSSSFDLDYDFQRDYYDR (M) S(0.0)AAEMY(0.0)GS(0.0)VT(0.0)EHPS(0.99)PS(0.0)PLLS(0.0)S(0.0)S(0.0)FDLDY(0.0)DFQRDY(0.0)Y(0.0)DR s:Phosphorylated S HNRNPC 33726.5 4 8 261.2 397.39 HUMAN 1 1.8873 -7.6269 GSVVKSHSITNMEIG-p Q96RT1-8;S872-p GSVVKSHSITNMEIG 0.358796058640274 0.0235281149257784 0.173333333333333 0.374666666666667 8.27116432592284 22.2083875244319 0.173333333333333 0.374666666666667 0.148896183955537 0.00601396986450251 1.68217059858822 4.36507317305191 Q96RT1 ERBB2IP Q96RT1.8.S872.p_ERBB2IP Q96RT1-8_S872s _1_1_872_872 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5|Q96RT1-4|Q96RT1-6|Q96RT1-7 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17728.17728.2 15.15 15.15 1.315 3 1 1 0 962.9991 1845.0304 S872s TMT10 870 (K) SHsITNMEIGGLK (I) S(0.0)HS(0.99)IT(0.0)NMEIGGLK K:TMT10,s:Phosphorylated S ERBIN 159762.8 7 13 81.1 633.5 HUMAN 1 8.2712 22.2084 GSVVSLQSPGSRSSS-p Q2KHR2;S424-p GSVVSLQSPGSRSSS 0.864679832642579 0.0191035012234359 -0.0283333333333333 -0.572666666666667 1.22840780355147 23.6378542242736 -0.0283333333333333 -0.572666666666667 0.753631807159898 0.00432727581619046 -0.330229973564361 -4.7013997265702 Q2KHR2 RFX7 Q2KHR2.S424.p_RFX7 Q2KHR2_S424s _1_1_424_424 Q2KHR2 Q2KHR2|Q2KHR2-2|H0YLX2 DNA-binding protein RFX7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10726.10726.2 15.61 15.61 2 4 1 1 0 798.9008 1516.8281 S424s TMT10 416 (K) NGSVVSLQsPGSR (S) NGS(0.0)VVS(0.0)LQS(0.99)PGS(0.0)R s:Phosphorylated S RFX7 147863 2 8 511.1 287.25 HUMAN 1 -1.2284 -23.6379 GSWGSGRSSPLLGGN-p Q9C075;S64-p GSWGSGRSSPLLGGN 0.30738224176677 0.020766442681197 0.141333333333333 0.432333333333333 9.57616601725808 23.0183589308535 0.141333333333333 0.432333333333333 0.110251218568863 0.00499073036630107 1.9081604996023 4.5536634702791 Q9C075 KRT23 Q9C075.S64.p_KRT23 Q9C075_S64s _1_1_64_64 Q9C075 Q9C075 Keratin, type I cytoskeletal 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15133.15133.2 12.2 12.2 1.175 2 1 1 0 734.4018 1387.8309 S64s TMT10 64 (R) sSPLLGGNGK (A) S(0.99)S(0.0)PLLGGNGK K:TMT10,s:Phosphorylated S KRT23 48301.4 11 7 2033.1 101.49 HUMAN 1 9.5762 23.0184 GSYAKLPSPEPSMSP-p O43303;S366-p GSYAKLPSPEPSMSP 0.879897888357523 0.0146076759554989 0.0256666666666667 -0.424 1.09272288851266 25.4193662556851 0.0256666666666667 -0.424 0.777548899711954 0.00287119953130888 0.296977953782475 -5.14421805195218 O43303 CCP110 O43303.S366.p_CCP110 O43303_S366s _1_1_366_366 O43303 O43303 Centriolar coiled-coil protein of 110 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17572.17572.3 10.89 10.89 4.363 3 1 1 0 569.9665 1627.913 S366s TMT10 364 (K) LPsPEPSMSPK (M) LPS(0.99)PEPS(0.0)MS(0.0)PK K:TMT10,s:Phosphorylated S CCP110 114220.9 1 4 1000.1 190.08 HUMAN 1 1.0927 -25.4194 GSYSTQASAAAATAE-p O14828;S91-p GSYSTQASAAAATAE 0.839053415531228 0.391678896243382 -0.034 -0.0853333333333333 1.47561781066763 5.41233091010754 -0.034 -0.0853333333333333 0.711931516149187 0.287585449516084 -0.389265943731829 -1.1788566956993 O14828 SCAMP3 O14828.S91.p_SCAMP3 O14828_S91s _1_1_91_91 O14828 O14828|O14828-2 Secretory carrier-associated membrane protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25008.25008.3 15.39 15.39 3.509 7 1 1 0 852.431 2475.3131 S91s TMT10 82 (K) NYGSYSTQAsAAAATAELLK (K) NY(0.0)GS(0.0)Y(0.0)S(0.0)T(0.0)QAS(0.99)AAAAT(0.0)AELLK K:TMT10,s:Phosphorylated S SCAMP3 38685.6 2 4 2601.1 77.12 HUMAN 1 -1.4756 -5.4123 GTAGRRASNEFLVCG-p Q8IYT8;S378-p GTAGRRASNEFLVCG 0.378645044751783 0.149358687156241 0.118 0.165333333333333 7.79222855108664 10.8691943488906 0.118 0.165333333333333 0.166255930102398 0.0818616634003783 1.59909588064846 2.13226055427045 Q8IYT8 ULK2 Q8IYT8.S378.p_ULK2 Q8IYT8_S378s _1_1_378_378 Q8IYT8 Q8IYT8 Serine/threonine-protein kinase ULK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20538.20538.4 15.73 15.73 8.237 6 1 1 0 986.485 3862.953 S378s TMT10 376 (R) RAsNEFLVCGGQCQPTVSPHSETAPIPVPTQIR (N) RAS(0.99)NEFLVCGGQCQPT(0.0)VS(0.0)PHS(0.0)ET(0.0)APIPVPT(0.0)QIR C:Carbamidomethylation,s:Phosphorylated S ULK2 114346.8 1 2 1902.1 108.29 HUMAN 1 7.7922 10.8692 GTAKDSLSPVLHPSD-p Q9HCN4-4;S302-p GTAKDSLSPVLHPSD 0.102717818778673 0.0991848868491076 -0.385333333333333 -0.194666666666667 20.9084791868914 13.2620597045078 -0.385333333333333 -0.194666666666667 0.00811245090054601 0.0471839211607703 -4.07668953973129 -2.55696080815422 Q9HCN4 GPN1 Q9HCN4.4.S302.p_GPN1 Q9HCN4-4_S302s _1_1_302_302 Q9HCN4-4 Q9HCN4-5|Q9HCN4-4|Q9HCN4-2|Q9HCN4-3 Isoform 4 of GPN-loop GTPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26725.26725.3 19.44 19.44 2.109 4 1 1 0 691.3709 1992.1327 S302s TMT10 299 (K) DSLsPVLHPSDLILTR (G) DS(0.0)LS(0.99)PVLHPS(0.0)DLILT(0.0)R s:Phosphorylated S GPN1 41070.7 2 3 2311.1 88.47 HUMAN 1 -20.9085 -13.2621 GTALLLPSPEFDYRP-p Q5THK1;S600-p GTALLLPSPEFDYRP 0.589311105633449 0.163523610960245 0.0876666666666667 -0.144333333333333 4.22924568987442 10.3387186281881 0.0876666666666667 -0.144333333333333 0.377637775747134 0.0924971043394088 0.960704244315148 -2.0397672731639 Q5THK1 PRR14L Q5THK1.S600.p_PRR14L Q5THK1_S600s_1_1_600_600 Q5THK1 Q5THK1|Q5THK1-4|Q5THK1-2 Protein PRR14L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27891.27891.3 11.84 11.95 5.378 4 1 1 0 857.0847 2506.3027 Q592q S600s Hydrogen 592 (K) qGTALLLPsPEFDYRPESEK (V) Q(1.0)GT(0.0)ALLLPS(0.99)PEFDY(0.0)RPES(0.0)EK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S PRR14L 241289.3 1 4 1413.1 145.23 HUMAN 1 4.2292 -10.3387 GTASKPASPIGGPTQ-p Q96L91;S1732-p GTASKPASPIGGPTQ 0.391439384500192 0.0221038624414658 -0.115 0.323333333333333 7.50977891824321 22.618235593102 -0.115 0.323333333333333 0.177427980000025 0.00547238244056265 -1.54998475630502 4.45986612518905 Q96L91 EP400 Q96L91.S1732.p_EP400 Q96L91_S1732s _1_1_1732_1732 Q96L91 Q96L91|Q96L91-2|Q96L91-5|Q96L91-3|Q96L91-4 E1A-binding protein p400 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21441.21441.3 21.44 21.44 2.356 4 1 1 0 1181.6429 3462.9411 S1732s TMT10 1714 (R) VAVNALAVGEPGTASKPAsPIGGPTQEEK (T) VAVNALAVGEPGT(0.0)AS(0.0)KPAS(0.99)PIGGPT(0.0)QEEK K:TMT10,s:Phosphorylated S EP400 344909.2 3 21 91.1 620.97 HUMAN 1 -7.5098 22.6182 GTAYTFFTPGNLKQA-p A0A1W2PQ51;T523-p GTAYTFFTPGNLKQA 0.530430921697941 0.410692077568073 -0.171666666666667 -0.112666666666667 5.09737008998254 5.14123786364955 -0.171666666666667 -0.112666666666667 0.30921673559435 0.306109081078871 -1.12187211253002 -1.1296449748414 A0A1W2PQ51 NotFound A0A1W2PQ51.T523.p_NotFound A0A1W2PQ51_T523t _1_1_523_523 A0A1W2PQ51 A0A1W2PQ51|Q92841|A0A1X7SBZ2|Q92841-2|Q92841-3|Q92841-1 Probable ATP-dependent RNA helicase DDX17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26359.26359.3 14.51 14.51 4.181 4 1 1 0 652.3411 1875.0417 T523t TMT10 516 (K) GTAYTFFtPGNLK (Q) GT(0.0)AY(0.0)T(0.0)FFT(0.99)PGNLK K:TMT10,t:Phosphorylated T DDX17 81140.9 1 3 2075.2 99 HUMAN 1 -5.0974 -5.1412 GTCRISMSEVDLNVA-p Q09666;S572-p GTCRISMSEVDLNVA 0.106843101544198 0.00995309608398391 -0.439 -0.497666666666667 20.4454739076108 28.1352066745839 -0.439 -0.497666666666667 0.00902511218936097 0.00153631168069817 -3.97521282061534 -5.87565850737521 Q09666 AHNAK Q09666.S572.p_AHNAK Q09666_S572s _1_1_572_572 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27119.27119.2 19.12 13.99 2.18 2 1 1 0 1006.5295 1932.0876 S572s TMT10 569 (R) ISMsEVDLNVAAPK (V) IS(0.0)MS(0.99)EVDLNVAAPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 41 31 1.1 4313.36 HUMAN 1 -20.4455 -28.1352 GTDLREHSPSESEKE-p Q12986;S150-p GTDLREHSPSESEKE 0.341280214844005 0.0181046218485373 -0.319666666666667 0.449333333333333 8.67588835460788 23.9899826285055 -0.319666666666667 0.449333333333333 0.135647303372239 0.00399026498438777 -1.75225841785035 4.78677297224674 Q12986 NFX1 Q12986.S150.p_NFX1 Q12986_S150s _1_1_150_150 Q12986 Q12986|Q12986-2|Q12986-3 Transcriptional repressor NF-X1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5308.5308.3 13.17 8.25 1.466 6 1 1 0 805.0482 2333.1621 S150s TMT10 140 (R) SESGTDLREHsPSESEK (E) S(0.0)ES(0.0)GT(0.0)DLREHS(0.99)PS(0.0)ES(0.0)EK K:TMT10,s:Phosphorylated S NFX1 130097.9 5 3 3026.1 62.9 HUMAN 1 -8.6759 23.99 GTDSCRPSL______-p Q8TD19;S978-p GTDSCRPSL______ 0.990609489350973 0.0523164690099624 0.00299999999999999 -0.236666666666667 0.0843822682085614 17.0978926324083 0.00300000000000001 -0.236666666666667 0.980757805431413 0.0195079097061577 0.0252536326569578 -3.27942362830475 Q8TD19 NEK9 Q8TD19.S978.p_NEK9 Q8TD19_S978s_1_1_978_978 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24380.24380.5 11.78 11.78 0 7 1 1 0 931.4333 4557.1861 M956m S978s TMT10 946 (K) GTQTAKEEMEmDPKPDLDSDSWCLLGTDSCRPsL (-) GT(0.0)QT(0.0)AKEEM(0.50)EM(0.50)DPKPDLDS(0.0)DS(0.0)WCLLGT(0.0)DS(0.0)CRPS(0.99)L K:TMT10,C:Carbamidomethylation,m:Oxidized methionine,s:Phosphorylated S NEK9 108935.2 1 17 224.1 425.83 HUMAN 1 0.0844 -17.0979 GTDTAVPSDSDKKLP-p P34932;S828-p GTDTAVPSDSDKKLP 0.6525879959072 0.0320849526179946 -0.108333333333333 0.516 3.47609510679211 20.1558266185332 -0.108333333333333 0.516 0.449149054016544 0.00964755666641491 -0.81555933667445 3.9087784905393 P34932 HSPA4 P34932.S828.p_HSPA4 P34932_S828s _1_1_828_828 P34932 P34932 Heat shock 70 kDa protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12479.12479.4 18.84 15.14 1.207 4 1 1 0 976.9402 3824.7847 S828s TMT10 799 (K) NAEQNGPVDGQGDNPGPQAAEQGTDTAVPsDSDK (K) NAEQNGPVDGQGDNPGPQAAEQGT(0.0)DT(0.0)AVPS(0.99)DS(0.0)DK K:TMT10,s:Phosphorylated S HSPA4 95185.1 3 19 549.1 274.67 HUMAN 1 -3.4761 20.1558 GTEAVKKSLEGIFDD-p Q13009;S726-p GTEAVKKSLEGIFDD 0.272310499750431 0.012379974589777 -0.288666666666667 0.446333333333333 10.7026970520684 26.6223649976163 -0.288666666666667 0.446333333333334 0.0850609629241393 0.00217652419975905 -2.10410219197079 5.45936183713565 Q13009 TIAM1 Q13009.S726.p_TIAM1 Q13009_S726s _1_1_726_726 Q13009 Q13009 T-lymphoma invasion and metastasis-inducing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34292.34292.3 17.06 17.06 99 1 1 1 0 681.6862 1963.0788 S726s TMT10 726 (K) sLEGIFDDIVPDGK (R) S(1.0)LEGIFDDIVPDGK K:TMT10,s:Phosphorylated S TIAM1 178817.2 2 6 1466.1 140.01 HUMAN 1 -10.7027 26.6224 GTEDSDFSTDLEHTD-p O95251;S21-p GTEDSDFSTDLEHTD 0.0519525792237636 0.122378756412033 0.575 0.397 28.0807420926436 12.0319517303597 0.575 0.397 0.00155569978157667 0.0626332326087305 5.86878230195103 2.33683356600389 O95251 KAT7 O95251.S21.p_KAT7 O95251_S18sS21s_2_2_18_21 O95251 O95251|O95251-4|O95251-2 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10438.10438.4 12.44 12.44 1.21 13 2 2 0 935.3674 3578.5072 S18s S21s TMT10 7 (R) NAGSSSDGTEDsDFsTDLEHTDSSESDGTSRR (S) NAGS(0.0)S(0.0)S(0.0)DGT(0.0)EDS(0.99)DFS(0.99)T(0.0)DLEHT(0.0)DS(0.0)S(0.0)ES(0.0)DGT(0.0)S(0.0)RR s:Phosphorylated S KAT7 71325.8 2 14 691.1 243.06 HUMAN 1 28.0807 12.032 GTEGERDSDDALLKM-p Q5VWC4;S259-p GTEGERDSDDALLKM 0.779676808313366 0.342887339453724 0.042 -0.108666666666667 2.07750989662752 6.15748881050842 0.042 -0.108666666666667 0.619796344291717 0.242242934561006 0.525899553032517 -1.31225088023131 Q5VWC4 PSMD4 Q5VWC4.S259.p_PSMD4 Q5VWC4_S259s _1_1_259_259 Q5VWC4 Q5VWC4 26S proteasome non-ATPase regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18959.18959.4 23.74 26.72 1.136 5 1 1 0 800.898 3120.6061 S259s TMT10 238 (R) AAAASAAEAGIATTGTEGERDsDDALLK (M) AAAAS(0.0)AAEAGIAT(0.0)T(0.0)GT(0.0)EGERDS(0.99)DDALLK K:TMT10,s:Phosphorylated S PSMD4 41306.5 4 3 2823.1 69.24 HUMAN 1 2.0775 -6.1575 GTEGLVDSFSQGLER-p O75170;S289-p GTEGLVDSFSQGLER 0.460247258167029 0.385718561230557 0.100333333333333 0.0843333333333334 6.21411805484822 5.49990114596827 0.100333333333333 0.0843333333333334 0.23910474489046 0.281844708397608 1.32261866776042 1.1946677498924 O75170 PPP6R2 O75170.S289.p_PPP6R2 O75170_S289s _1_1_289_289 O75170 O75170|O75170-5|O75170-3|O75170-4|O75170-2|O75170-6 Serine/threonine-protein phosphatase 6 regulatory subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18173.18173.3 16.5 12.28 1.178 3 1 1 0 720.3613 2079.1032 S289s TMT10 280 (R) RVGTEGLVDsFSQGLER (S) RVGT(0.0)EGLVDS(0.99)FS(0.0)QGLER s:Phosphorylated S PPP6R2 106423.3 4 1 3528.1 48.96 HUMAN 1 6.2141 5.4999 GTEIDGRSISLYYTG-p P19338;S458-p GTEIDGRSISLYYTG 0.739118396287836 0.233749664579325 -0.0463333333333333 0.178 2.4888339528635 8.31228208760959 -0.0463333333333333 0.178 0.563789008500284 0.147493129732894 -0.61452893173223 1.6887369986663 P19338 NCL P19338.S458.p_NCL P19338_S458s _1_1_458_458 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18774.18774.3 15.65 15.65 1.114 6 1 1 0 852.4312 2475.3131 S458s TMT10 450 (K) QGTEIDGRsISLYYTGEK (G) QGT(0.0)EIDGRS(0.99)IS(0.0)LY(0.0)Y(0.0)T(0.0)GEK K:TMT10,s:Phosphorylated S NCL 76670.1 2 12 114.1 570.88 HUMAN 1 -2.4888 8.3123 GTEKDKNSVNFKNIY-p P12956;S96-p GTEKDKNSVNFKNIY 0.841819528641892 0.0660071503440806 0.0313333333333333 0.28 1.44665289597656 15.7029497963149 0.0313333333333333 0.28 0.716695554095086 0.0268970729193271 0.382446050107002 3.00928147953676 P12956 XRCC6 P12956.S96.p_XRCC6 P12956_S96s _1_1_96_96 P12956 P12956|B1AHC9 X-ray repair cross-complementing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11542.11542.3 9.34 9.34 99 1 1 1 0 573.6541 1638.9782 S96s TMT10 93 (K) DKNsVNFK (N) DKNS(1.0)VNFK K:TMT10,s:Phosphorylated S XRCC6 70127.1 1 7 815.1 220.5 HUMAN 1 1.4467 15.7029 GTENTFPSPKAIPNG-p Q9GZM8;S231-p GTENTFPSPKAIPNG 0.0868192866229433 0.00164640726975777 -0.365666666666667 -0.903333333333333 22.6644644020538 44.3416214918587 -0.365666666666667 -0.903333333333334 0.00541444017882016 3.67991553818177e-05 -4.47555199348269 -12.2677860459514 Q9GZM8 NDEL1 Q9GZM8.S231.p_NDEL1 Q9GZM8_S231s _1_1_231_231 Q9GZM8 Q9GZM8-2|Q9GZM8-3|A6NIZ0 Nuclear distribution protein nudE-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12249.12249.3 11.92 11.92 11.919 3 1 1 0 539.274 1535.847 S231s TMT10 224 (K) GTENTFPsPK (A) GT(0.0)ENT(0.0)FPS(0.99)PK K:TMT10,s:Phosphorylated S NDEL1 38545.3 3 3 3012.1 63.32 HUMAN 1 -22.6645 -44.3416 GTEQDLPSPENSSVK-p Q70CQ2;S3406-p GTEQDLPSPENSSVK 0.422807784151987 0.115276826414596 0.162333333333333 0.395333333333333 6.88620865403938 12.3786249849453 0.162333333333333 0.395333333333333 0.20482319417869 0.0578279106746655 1.44107956893205 2.39843639765686 Q70CQ2 USP34 Q70CQ2.S3406.p_USP34 Q70CQ2_S3406s _1_1_3406_3406 Q70CQ2 Q70CQ2|Q70CQ2-2|Q70CQ2-3 Ubiquitin carboxyl-terminal hydrolase 34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20483.20483.3 17.74 16.1 3.965 6 1 1 0 951.7986 2773.4144 S3406s TMT10 3392 (R) DSSIIDPGTEQDLPsPENSSVK (E) DS(0.0)S(0.0)IIDPGT(0.0)EQDLPS(0.99)PENS(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S USP34 409988.3 2 9 713.1 238.32 HUMAN 1 6.8862 12.3786 GTESGKDSEQENGLG-p Q86US8;S874-p GTESGKDSEQENGLG 0.455652494519437 0.0543646518323215 -0.099 0.242333333333333 6.29640860681809 16.8590070941919 -0.099 0.242333333333333 0.234616817438517 0.0206110107866515 -1.33719927914943 3.23247875862072 Q86US8 SMG6 Q86US8.S874.p_SMG6 Q86US8_S874s _1_1_874_874 Q86US8 Q86US8 Telomerase-binding protein EST1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17323.17323.4 20.58 19.04 2.374 8 1 1 0 880.4312 3438.7439 S874s TMT10 864 (R) SSQGTESGKDsEQENGLGSLSPSDLNK (R) S(0.0)S(0.0)QGT(0.0)ES(0.0)GKDS(0.99)EQENGLGS(0.0)LS(0.0)PS(0.0)DLNK K:TMT10,s:Phosphorylated S SMG6 161600 2 6 1491.1 137.14 HUMAN 1 -6.2964 16.859 GTFGGLGSKSKGHYE-p Q09666;S5830-p GTFGGLGSKSKGHYE 0.293283447312088 0.107252004257257 0.193 -0.342666666666667 10.0512459045965 12.8088128845513 0.193 -0.342666666666667 0.0988269539086755 0.0523743578889525 1.99061505342701 -2.47533812589526 Q09666 AHNAK Q09666.S5830.p_AHNAK Q09666_S5830s _1_1_5830_5830 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23631.23631.3 15.5 15.5 12.149 2 1 1 0 503.6024 1428.8251 S5830s TMT10 5822 (K) FGTFGGLGsK (S) FGT(0.0)FGGLGS(0.99)K K:TMT10,s:Phosphorylated S AHNAK 629603.7 6 163 1.1 4313.36 HUMAN 1 10.0512 -12.8088 GTFLSGLSDCTNVTF-p Q5JTH9;S100-p GTFLSGLSDCTNVTF 0.934121732880443 0.521347361128808 0.013 -0.07 0.58223223310088 3.80122256317239 0.013 -0.07 0.874534157293487 0.416752048931364 0.165531752860851 -0.878793694064681 Q5JTH9 RRP12 Q5JTH9.S100.p_RRP12 Q5JTH9_S100s _1_1_100_100 Q5JTH9 Q5JTH9|Q5JTH9-3|Q5JTH9-2 RRP12-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27028.27028.3 15.37 13.07 1.645 8 1 1 0 849.4139 2466.2587 S100s TMT10 91 (K) SSGTFLSGLsDCTNVTFSK (V) S(0.0)S(0.0)GT(0.0)FLS(0.0)GLS(0.99)DCT(0.0)NVT(0.0)FS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RRP12 145125.9 1 5 1122.1 175.08 HUMAN 1 0.5822 -3.8012 GTFPKALSIESLSPT-p Q9Y3M8;S411-p GTFPKALSIESLSPT 0.572746142088394 0.0299116055157795 0.074 0.294333333333333 4.4546441802937 20.6266128650486 0.074 0.294333333333333 0.358538322302672 0.00865642784788093 1.00309725074799 4.01083335372507 Q9Y3M8 STARD13 Q9Y3M8.S411.p_STARD13 Q9Y3M8_S411s _1_1_411_411 Q9Y3M8 Q9Y3M8|Q9Y3M8-2|Q9Y3M8-4|Q9Y3M8-3|Q9Y3M8-5 StAR-related lipid transfer protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25144.25144.3 18.21 18.21 1.232 6 1 1 0 781.38 2262.1564 S411s TMT10 409 (K) ALsIESLSPTDSSNGVNWR (T) ALS(0.99)IES(0.0)LS(0.0)PT(0.0)DS(0.0)S(0.0)NGVNWR s:Phosphorylated S STARD13 126277.4 10 6 564.1 271.22 HUMAN 1 4.4546 20.6266 GTFPRSLSIESLCPE-p Q92502-2;S315-p GTFPRSLSIESLCPE 0.297571003658287 0.0291794612059792 0.210666666666667 -0.405333333333333 9.90006739440045 20.7762834597611 0.210666666666667 -0.405333333333333 0.1023277112806 0.00836318404118268 1.96435386404761 -4.04359277124886 Q92502 STARD8 Q92502.2.S315.p_STARD8 Q92502-2_S315s _1_1_315_315 Q92502-2 Q92502-2 Isoform 2 of StAR-related lipid transfer protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17095.17095.3 18.21 18.21 2.146 3 1 1 0 636.9634 1828.9061 S315s TMT10 313 (R) SLsIESLCPEDGHR (L) S(0.0)LS(0.99)IES(0.0)LCPEDGHR C:Carbamidomethylation,s:Phosphorylated S STARD8 123229.8 1 1 5558.1 18.21 HUMAN 1 9.9001 -20.7763 GTFRNENSPEMCRKC-p O14798;S121-p GTFRNENSPEMCRKC 0.334308576365518 0.923917507104541 0.163333333333333 0.015 8.88179074424495 0.484927904878258 0.163333333333333 0.015 0.129366231037608 0.894349378469833 1.78790040585051 0.139156299869966 O14798 TNFRSF10C O14798.S121.p_TNFRSF10C O14798_S121s _1_1_121_121 O14798 O14798 Tumor necrosis factor receptor superfamily member 10C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6904.6904.4 12.07 8.44 3.64 2 1 1 0 599.0349 2313.148 S121s TMT10 113 (K) EGTFRNENsPEMCRK (C) EGT(0.0)FRNENS(0.99)PEMCRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNFRSF10C 28262.1 2 1 6362.1 12.07 HUMAN 1 8.8818 0.4849 GTFSPGASPGSEART-p Q16512-2;S543-p GTFSPGASPGSEART 0.987481982540924 0.990937846251134 -0.00366666666666667 -0.0013333333333333 0.111142505517845 0.0576473226076001 -0.00366666666666667 -0.00133333333333329 0.974733179351377 0.986813921634001 -0.0331634322736661 -0.0173027958896717 Q16512 PKN1 Q16512.2.S543.p_PKN1 Q16512-2_S543s _1_1_543_543 Q16512-2 Q16512-2|Q16512-3 Isoform 2 of Serine/threonine-protein kinase N1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21386.21386.3 20.31 20.31 1.259 6 1 1 0 799.7261 2317.1986 S543s TMT10 528 (R) LIPNATGTGTFSPGAsPGSEAR (T) LIPNAT(0.0)GT(0.0)GT(0.0)FS(0.0)PGAS(0.99)PGS(0.0)EAR s:Phosphorylated S PKN1 105469.7 1 6 721.1 237.15 HUMAN 1 -0.1111 -0.0576 GTGAPGQSPGAGRAC-p Q13330;S386-p GTGAPGQSPGAGRAC 0.998180995519267 0.146598142473043 0.00033333333333332 -0.268 0.0136700238964027 10.9813231805913 0.000333333333333338 -0.268 0.996857309298664 0.0797751596394983 0.00412399061767765 -2.15186939669601 Q13330 MTA1 Q13330.S386.p_MTA1 Q13330_S386s_1_1_386_386 Q13330 Q13330|E7ESY4|Q13330-3|Q13330-2 Metastasis-associated protein MTA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8678.8678.2 19.16 19.16 4.915 2 1 1 0 931.9514 1781.9456 N378n S386s TMT10 374 (K) AGVVnGTGAPGQsPGAGR (A) AGVVN(1.0)GT(0.0)GAPGQS(0.99)PGAGR n:Deamidated,s:Phosphorylated S MTA1 81469.4 4 2 1200.1 167 HUMAN 1 0.0137 -10.9813 GTGEEPGSQGLNGEA-p O15355;S183-p GTGEEPGSQGLNGEA 0.20055874973276 0.00369002570624909 0.224333333333333 0.605 13.5718747260158 36.1121798871056 0.224333333333333 0.605 0.0439351918743909 0.000244783427348664 2.61464437892723 8.51279876051797 O15355 PPM1G O15355.S183.p_PPM1G O15355_S183s_1_1_183_183 O15355 O15355 Protein phosphatase 1G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8886.8886.2 22.44 16.65 6.105 5 1 1 0 1328.5658 2575.1706 S183s N187n TMT10 173 (K) SGGGTGEEPGsQGLnGEAGPEDSTR (E) S(0.0)GGGT(0.0)GEEPGS(0.99)QGLN(1.0)GEAGPEDS(0.0)T(0.0)R s:Phosphorylated S,n:Deamidated PPM1G 59955.3 5 1 1835.1 112.03 HUMAN 1 13.5719 36.1122 GTGFNPNTLDKQKER-p Q96N67-6;T142-p GTGFNPNTLDKQKER 0.036022948076598 0.00529397314454849 -0.563333333333333 -0.511 33.4065797722114 33.0745975860038 -0.563333333333333 -0.511 0.000456396203149027 0.000492651989997119 -7.53937680937595 -7.41157143129247 Q96N67 DOCK7 Q96N67.6.T142.p_DOCK7 Q96N67-6_T142t _1_1_142_142 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21047.21047.2 16.18 12.39 5.815 2 1 1 0 907.9775 1734.9791 T142t TMT10 134 (K) LGTGFNPNtLDK (Q) LGT(0.0)GFNPNT(0.99)LDK K:TMT10,t:Phosphorylated T DOCK7 243551.1 3 2 345.1 352.4 HUMAN 1 -33.4066 -33.0746 GTGKLGFSFVRITAL-p O60271;S1144-p GTGKLGFSFVRITAL 0.312808396386622 0.00537601195102094 -0.238333333333333 0.546 9.4444682998807 32.9520726557154 -0.238333333333333 0.546 0.113645742390206 0.000506748806403198 -1.88533500611335 7.36984684508634 O60271 SPAG9 O60271.S1144.p_SPAG9 O60271_S1144s _1_1_1144_1144 O60271 A0A087WYG2|Q9UPT6|E9PFH7|O60271|A0A087X2D8|O60271-2 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25686.25686.2 8.14 8.14 99 1 1 1 0 567.7991 1054.6247 S1144s TMT10 1141 (K) LGFsFVR (I) LGFS(1.0)FVR s:Phosphorylated S SPAG9 147001.6 2 37 84.1 629.25 HUMAN 1 -9.4445 32.9521 GTGQSDDSDIWDDTA-p Q16637;S31-p GTGQSDDSDIWDDTA 0.438077651310896 0.603543977160916 0.105333333333333 -0.0536666666666667 6.59970889739607 2.97479404525535 0.105333333333333 -0.0536666666666667 0.218790827201363 0.504104524600257 1.39074588740392 -0.71518812350774 Q16637 SMN1 Q16637.S31.p_SMN1 Q16637_S31s _1_1_31_31 Q16637 Q16637 Survival motor neuron protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23001.23298.3 20.02 15.22 2.227 4 1 1 0 877.7626 2551.304 S31s TMT10 23 (R) RGTGQSDDsDIWDDTALIK (A) RGT(0.0)GQS(0.0)DDS(0.99)DIWDDT(0.0)ALIK K:TMT10,s:Phosphorylated S SMN1 32304.6 1 3 1780.1 115.32 HUMAN 1 6.5997 -2.9748 GTIVRSQTFSPGARS-p Q9ULE0;T909-p GTIVRSQTFSPGARS 0.091379469142163 0.0113523621250542 0.838333333333333 1.02366666666667 22.114834993658 27.2309438786055 0.838333333333333 1.02366666666667 0.00614492378355926 0.00189193238878878 4.34823864024755 5.62406614555047 Q9ULE0 WWC3 Q9ULE0.T909.p_WWC3 Q9ULE0_T909t _1_1_909_909 Q9ULE0 Q9ULE0 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6882.6882.2 12.8 5.69 2.208 3 1 1 0 630.3044 1179.632 T909t TMT10 907 (R) SQtFSPGAR (S) S(0.0)QT(0.99)FS(0.0)PGAR t:Phosphorylated T WWC3 123814.7 2 23 161.1 495.35 HUMAN 1 22.1148 27.2309 GTKGLDFSDRIGKTK-p Q13561;S70-p GTKGLDFSDRIGKTK 0.06844546599687 0.288215918029848 -0.626666666666667 -0.186 25.1242378599815 7.12872099859628 -0.626666666666667 -0.186 0.00307309661329156 0.193699232604937 -5.07531138302654 -1.48310953630939 Q13561 DCTN2 Q13561.S70.p_DCTN2 Q13561_S70s _1_1_70_70 Q13561 Q13561-2|Q13561-3|F8W1I6 Dynactin subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17545.17545.3 10.3 7.43 99 1 1 1 0 549.2959 1565.9052 S70s TMT10 66 (K) GLDFsDRIGK (T) GLDFS(1.0)DRIGK K:TMT10,s:Phosphorylated S DCTN2 44344.3 2 2 1016.1 188.09 HUMAN 1 -25.1242 -7.1287 GTKGSEDSPPKHAGN-p P48651;S442-p GTKGSEDSPPKHAGN 0.162411251147367 0.0732175275597282 0.237 -0.262666666666667 15.8078278020094 15.0777600880864 0.237 -0.262666666666667 0.0262553141938881 0.0310616120497678 3.03137755534562 -2.8911493003881 P48651 PTDSS1 P48651.S442.p_PTDSS1 P48651_S442s _1_1_442_442 P48651 P48651|P48651-2 Phosphatidylserine synthase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3099.3099.5 16.87 16.87 2.792 6 1 1 0 610.1041 2966.5283 S442s TMT10 435 (K) GTKGSEDsPPKHAGNNESHSSR (R) GT(0.0)KGS(0.0)EDS(0.99)PPKHAGNNES(0.0)HS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S PTDSS1 56211.2 13 3 2275.1 90.14 HUMAN 1 15.8078 -15.0778 GTKHLSPYATLTVGD-p Q9BSJ8-2;Y832-p GTKHLSPYATLTVGD 0.560876405876255 0.303010010226008 -0.0903333333333333 -0.113333333333333 4.62748124438098 6.84690574161 -0.0903333333333333 -0.113333333333333 0.344549699565211 0.206685222081397 -1.03532724190593 -1.43379988007713 Q9BSJ8 ESYT1 Q9BSJ8.2.Y832.p_ESYT1 Q9BSJ8-2_Y832y _1_1_832_832 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.15094.15094.3 27.78 27.78 2.706 6 1 1 0 751.0573 2171.1861 Y832y TMT10 828 (K) HLSPyATLTVGDSSHK (T) HLS(0.0)PY(0.99)AT(0.0)LT(0.0)VGDS(0.0)S(0.0)HK K:TMT10,y:Phosphorylated Y ESYT1 124514 4 1 44.1 47.96 HUMAN 1 -4.6275 -6.8469 GTKPNAGSEEISSED-p Q9NY61;S316-p GTKPNAGSEEISSED 0.827100734127918 0.0138875769761835 -0.0395 0.3895 1.58697898615682 25.7762320246386 -0.0395 0.3895 0.693908330621134 0.0026447023281458 -0.41526022134601 5.23629569253876 Q9NY61 AATF Q9NY61.S316.p_AATF Q9NY61_S316sS320s_2_2_316_320 Q9NY61 Q9NY61 Protein AATF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21485.21485.5 21.64 21.64 1.147 5 2 2 0 812.4035 3898.0627 S316s S320s TMT10 305 (R) YLVDGTKPNAGsEEIsSEDDELVEEKK (Q) Y(0.0)LVDGT(0.0)KPNAGS(0.99)EEIS(0.99)S(0.0)EDDELVEEKK K:TMT10,s:Phosphorylated S AATF 63245.9 10 5 2183.1 94.22 HUMAN 2 -1.587 25.7762 GTKRKSLSDSESDDS-p Q13185;S95-p GTKRKSLSDSESDDS 0.238948116710707 0.12386322268942 1.22166666666667 -0.193 11.8870522520747 11.96618961358 1.22166666666667 -0.193 0.0647582009044955 0.0635888599232881 2.31231671000451 -2.3251826817162 Q13185 CBX3 Q13185.S95.p_CBX3 Q13185_S95s _1_1_95_95 Q13185 Q13185 Chromobox protein homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8796.9004.2 14.82 14.82 1.406 5 1 1 0 854.39 1627.8063 S95s TMT10 93 (K) SLsDSESDDSK (S) S(0.0)LS(0.99)DS(0.0)ES(0.0)DDS(0.0)K K:TMT10,s:Phosphorylated S CBX3 20982.2 9 10 1104.2 177.13 HUMAN 1 11.8871 -11.9662 GTKSDSASDSQEIKI-p O60551;S70-p GTKSDSASDSQEIKI 0.995222800843425 0.437732985212668 0.000999999999999992 0.0753333333333333 0.0386641828619857 4.77978085019314 0.000999999999999994 0.0753333333333334 0.991136755090213 0.332676340087134 0.0116310499487552 1.06333586988636 O60551 NMT2 O60551.S70.p_NMT2 O60551_S70s _1_1_70_70 O60551 O60551 Glycylpeptide N-tetradecanoyltransferase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8424.8424.3 12.13 8.07 1.633 4 1 1 0 568.9416 1624.843 S70s TMT10 66 (K) SDSAsDSQEIK (I) S(0.0)DS(0.0)AS(0.99)DS(0.0)QEIK K:TMT10,s:Phosphorylated S NMT2 57321.5 3 3 2519.1 80.26 HUMAN 1 0.0387 4.7798 GTKSEQLSNP_____-p Q92769;S486-p GTKSEQLSNP_____ 0.0478194935682717 0.0185872547845839 0.490333333333333 -0.387 29.3081478384739 23.8163511334274 0.490333333333333 -0.387 0.00117269538529817 0.00415302826291969 6.22435676072182 -4.74454755022047 Q92769 HDAC2 Q92769.S486.p_HDAC2 Q92769_S486s _1_1_486_486 Q92769 Q92769|Q92769-3 Histone deacetylase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7564.7564.2 7.27 7.27 3.917 3 1 1 0 799.9149 1518.8528 S486s TMT10 479 (K) GTKSEQLsNP (-) GT(0.0)KS(0.0)EQLS(0.99)NP K:TMT10,s:Phosphorylated S HDAC2 55933.8 2 11 700.2 240.49 HUMAN 1 29.3081 -23.8164 GTKSLKESEQESEEE-p Q9BW71;S223-p GTKSLKESEQESEEE 0.451712086772319 0.0286107106633554 -0.135333333333333 0.318666666666667 6.37406463678813 20.9004076806415 -0.135333333333333 0.318666666666667 0.230458927430452 0.00812754217770461 -1.35093733686114 4.07087770433853 Q9BW71 HIRIP3 Q9BW71.S223.p_HIRIP3 Q9BW71_S223s _1_1_223_223 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16773.16773.4 13.23 8.09 1.123 3 1 1 0 776.1744 3021.7126 S223s TMT10 219 (K) SLKEsEQESEEEILAQKK (E) S(0.0)LKES(0.99)EQES(0.0)EEEILAQKK K:TMT10,s:Phosphorylated S HIRIP3 62298.3 2 9 178.1 481.23 HUMAN 1 -6.3741 20.9004 GTKVKGEYDVTVPKL-p Q09666;Y715-p GTKVKGEYDVTVPKL 0.506609842161293 0.0330239547447504 -0.165 0.557333333333333 5.44462184659801 19.9721758281426 -0.165 0.557333333333333 0.285455105740019 0.010064273194715 -1.18494944177236 3.86936724761879 Q09666 AHNAK Q09666.Y715.p_AHNAK Q09666_Y715y _1_1_715_715 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK GG20160819_MSz_CCLE_T4D7_pY_Injection_01.16670.16670.3 12.28 11.12 1.804 2 1 1 0 668.0471 1922.1566 Y715y TMT10 711 (K) VKGEyDVTVPK (L) VKGEY(0.99)DVT(0.0)VPK K:TMT10,y:Phosphorylated Y AHNAK 629603.7 1 1 289.1 12.28 HUMAN 1 -5.4446 19.9722 GTLLSKPSPPLPPKR-p Q8IZ21;S291-p GTLLSKPSPPLPPKR 0.706246157488211 0.210002490099544 -0.107333333333333 -0.156 2.84007794444262 8.91637302155906 -0.107333333333333 -0.156 0.519986664056108 0.128340195892955 -0.687738836613276 -1.79324806249985 Q8IZ21 PHACTR4 Q8IZ21.S291.p_PHACTR4 Q8IZ21_S270sS291s_2_2_270_291 Q8IZ21 Q8IZ21|Q8IZ21-3 Phosphatase and actin regulator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36820.36820.5 24.5 24.5 1.267 6 2 2 0 764.2162 3657.1194 S270s S291s TMT10 269 (R) NsNPVIAELSQAINSGTLLSKPsPPLPPK (R) NS(0.99)NPVIAELS(0.0)QAINS(0.0)GT(0.0)LLS(0.0)KPS(0.99)PPLPPK K:TMT10,s:Phosphorylated S PHACTR4 78438 3 20 350.1 351.04 HUMAN 1 -2.8401 -8.9164 GTLPEHDSQDAGPIV-p Q8WXX7;S261-p GTLPEHDSQDAGPIV 0.518846820664332 0.00469298309070782 -0.0866666666666667 0.639666666666667 5.26375491030533 34.0522724178967 -0.0866666666666667 0.639666666666667 0.297594231692624 0.000393344206778707 -1.15218034899429 7.75175560320236 Q8WXX7 AUTS2 Q8WXX7.S261.p_AUTS2 Q8WXX7_S261s _1_1_261_261 Q8WXX7 Q8WXX7|Q8WXX7-2 Autism susceptibility gene 2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28997.28997.5 22.52 22.52 3.505 3 1 1 0 834.2506 4087.2683 S261s TMT10 239 (K) LFNTVIVNKDPELGVGTLPEHDsQDAGPIVPK (I) LFNT(0.0)VIVNKDPELGVGT(0.0)LPEHDS(0.99)QDAGPIVPK K:TMT10,s:Phosphorylated S AUTS2 139379 2 2 684.1 243.98 HUMAN 1 -5.2638 34.0523 GTLQPWNSDSTLNSR-p Q9H0H5;S257-p GTLQPWNSDSTLNSR 0.318436709095685 0.92043404803277 0.162 -0.0153333333333333 9.3020248168472 0.506751172010681 0.162 -0.0153333333333333 0.117434990858959 0.889866551660463 1.86065834265446 -0.145108997130078 Q9H0H5 RACGAP1 Q9H0H5.S257.p_RACGAP1 Q9H0H5_S257s _1_1_257_257 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17213.17213.2 18.02 18.02 3.336 6 1 1 0 1043.4941 2006.014 S257s TMT10 249 (K) TGTLQPWNsDSTLNSR (Q) T(0.0)GT(0.0)LQPWNS(0.99)DS(0.0)T(0.0)LNS(0.0)R s:Phosphorylated S RACGAP1 71709.9 7 9 574.1 268.64 HUMAN 1 9.302 -0.5068 GTLRFRLSPAARNIL-p O00330;S185-p GTLRFRLSPAARNIL 0.660704185872998 0.0256234842953931 0.0623333333333333 -0.353 3.36845836726444 21.6491968946668 0.0623333333333333 -0.353 0.460419981724996 0.00684038129173752 0.794306324271347 -4.23777783164001 O00330 PDHX O00330.S185.p_PDHX O00330_S185s _1_1_185_185 O00330 O00330|O00330-3 Pyruvate dehydrogenase protein X component, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11944.11944.3 9.04 5.37 99 1 1 1 0 409.5587 1146.6945 S185s TMT10 182 (R) FRLsPAAR (N) FRLS(1.0)PAAR s:Phosphorylated S PDHX 54349.5 2 2 4521.1 30.37 HUMAN 1 3.3685 -21.6492 GTLRKNQSSEDILRD-p Q13625-3;S486-p GTLRKNQSSEDILRD 0.291769074233042 0.00575422933881225 0.372666666666667 -0.591666666666667 10.0909244025854 32.4076229314113 0.372666666666667 -0.591666666666667 0.097928152162272 0.000574430785279606 1.99751166254643 -7.18682448804919 Q13625 TP53BP2 Q13625.3.S486.p_TP53BP2 Q13625-3_S486s _1_1_486_486 Q13625-3 Q13625-3|Q13625-2 Isoform 3 of Apoptosis-stimulating of p53 protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16067.16067.3 16.23 16.23 1.132 2 1 1 0 776.0648 2246.2141 S486s TMT10 484 (K) NQsSEDILRDAQVANK (N) NQS(0.99)S(0.0)EDILRDAQVANK K:TMT10,s:Phosphorylated S TP53BP2 127005.7 10 6 834.1 215.28 HUMAN 1 10.0909 -32.4076 GTLRRSDSQQAVKSP-p Q15036;S409-p GTLRRSDSQQAVKSP 0.0391574900042898 0.596846115012262 0.570666666666667 -0.052 31.8918456282064 3.03452641197993 0.570666666666667 -0.052 0.000646867656945034 0.497218591298658 7.029020708219 -0.727313561265784 Q15036 SNX17 Q15036.S409.p_SNX17 Q15036_S409s _1_1_409_409 Q15036 Q15036 Sorting nexin-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15693.15693.5 24.19 24.19 1.572 6 1 1 0 725.5873 3543.9408 S409s TMT10 406 (R) RSDsQQAVKSPPLLESPDATRESMVK (L) RS(0.0)DS(0.99)QQAVKS(0.0)PPLLES(0.0)PDAT(0.0)RES(0.0)MVK K:TMT10,s:Phosphorylated S SNX17 53185.6 7 3 1175.1 169.84 HUMAN 1 31.8918 -3.0345 GTLRRSQSDRTEYNQ-p Q9NXL2;S55-p GTLRRSQSDRTEYNQ 0.744118013547764 0.10725177753095 0.0516666666666667 0.209666666666667 2.43646327254887 12.8092212807375 0.0516666666666667 0.209666666666667 0.570628781277952 0.0523694330088907 0.60342844022846 2.47541138723309 Q9NXL2 ARHGEF38 Q9NXL2.S55.p_ARHGEF38 Q9NXL2_S55s _1_1_55_55 Q9NXL2 Q9NXL2|Q9NXL2-1 Rho guanine nucleotide exchange factor 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4803.4803.2 13.25 13.25 2.203 4 1 1 0 947.4588 1813.9445 S55s TMT10 53 (R) SQsDRTEYNQK (L) S(0.0)QS(0.99)DRT(0.0)EY(0.0)NQK K:TMT10,s:Phosphorylated S ARHGEF38 89988.8 3 2 2438.1 83.38 HUMAN 1 2.4365 12.8092 GTLRSAKSEESLTSL-p A7KAX9;S706-p GTLRSAKSEESLTSL 0.367571861538115 0.0639348260471012 0.139 0.272333333333333 8.06634648515645 15.89841288246 0.139 0.272333333333333 0.156086503287137 0.0257133529867737 1.64666803874758 3.04657292311921 A7KAX9 ARHGAP32 A7KAX9.S706.p_ARHGAP32 A7KAX9_S706s _1_1_706_706 A7KAX9 A7KAX9|A7KAX9-2|G3V174 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13468.13468.5 7.24 7.24 1.197 6 1 1 0 546.4853 2648.4346 S706s TMT10 703 (R) SAKsEESLTSLHAVDGDSK (L) S(0.0)AKS(0.99)EES(0.0)LT(0.0)S(0.0)LHAVDGDS(0.0)K K:TMT10,s:Phosphorylated S ARHGAP32 232236.5 3 10 159.1 497.4 HUMAN 1 8.0663 15.8984 GTLRSCFSWSGGLGD-p Q9UQ84;S610-p GTLRSCFSWSGGLGD 0.538800686374925 0.00103485274036437 0.117666666666667 -1.26233333333333 4.9624844351706 51.2281909468262 0.117666666666667 -1.26233333333333 0.31897126186152 7.53669439276559e-06 1.09717866140634 -16.5479514749274 Q9UQ84 EXO1 Q9UQ84.S610.p_EXO1 Q9UQ84_S610s _1_1_610_610 Q9UQ84 Q9UQ84|Q9UQ84-4 Exonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26530.26530.3 12.02 12.02 2.086 4 1 1 0 624.606 1791.8322 S610s TMT10 607 (R) SCFsWSGGLGDFSR (T) S(0.0)CFS(0.99)WS(0.0)GGLGDFS(0.0)R C:Carbamidomethylation,s:Phosphorylated S EXO1 95242.6 2 6 1477.1 139.01 HUMAN 1 4.9625 -51.2282 GTNGSEISDSDYQAE-p Q15417;S296-p GTNGSEISDSDYQAE 0.936107507392066 0.104275785358256 0.0176666666666667 0.233333333333333 0.55880933120521 12.9715926641306 0.0176666666666666 0.233333333333333 0.879263544108365 0.0504476259848401 0.159228170724167 2.50457875557319 Q15417 CNN3 Q15417.S296.p_CNN3 Q15417_S293sS296s_2_2_293_296 Q15417 Q15417|Q15417-2|Q15417-3 Calponin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18382.18382.5 30.22 30.22 1.137 13 2 2 0 1135.4655 5512.357 N291n S293s S296s TMT10 272 (K) YCAAPTEPVIHNGSQGTGTnGsEIsDSDYQAEYPDEYHGEYQDDYPR (D) Y(0.0)CAAPT(0.0)EPVIHN(0.0)GS(0.0)QGT(0.0)GT(0.0)N(0.99)GS(0.99)EIS(0.99)DS(0.0)DY(0.0)QAEY(0.0)PDEY(0.0)HGEY(0.0)QDDY(0.0)PR C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S CNN3 36584.2 6 14 1713.1 119.85 HUMAN 1 0.5588 12.9716 GTNPNGGSFEEVLSS-p J3KNE7;S179-p GTNPNGGSFEEVLSS 0.916114875747744 0.958522166178558 0.0176666666666667 0.00933333333333332 0.743494608692879 0.265160706864791 0.0176666666666667 0.00933333333333329 0.842656430110015 0.940771016985939 0.20823839659548 0.0778086459285026 J3KNE7 NotFound J3KNE7.S179.p_NotFound J3KNE7_S179s _1_1_179_179 J3KNE7 J3KNE7|Q16890|E9PPQ1|Q16890-5 Tumor protein D53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21673.21673.4 18.44 16.25 3.522 8 1 1 0 853.4162 3330.6624 S179s TMT10 170 (K) VGGTNPNGGsFEEVLSSTAHASAQSLAGGSRR (T) VGGT(0.0)NPNGGS(0.99)FEEVLS(0.0)S(0.0)T(0.0)AHAS(0.0)AQS(0.0)LAGGS(0.0)RR s:Phosphorylated S TPD52L1 23056.4 2 6 793.3 224.4 HUMAN 1 0.7435 0.2652 GTNSRGRSPSPIGVG-p Q9Y4B5;S1812-p GTNSRGRSPSPIGVG 0.549950036106406 0.757674682818682 0.0803333333333333 -0.032 4.79026032990636 1.66437409070687 0.0803333333333334 -0.032 0.33187456334094 0.681651807947657 1.06547821976595 -0.433074767374703 Q9Y4B5 MTCL1 Q9Y4B5.S1812.p_MTCL1 Q9Y4B5_S1812sS1814s_2_2_1812_1814 Q9Y4B5 Q9Y4B5|Q9Y4B5-3 Microtubule cross-linking factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20563.20563.5 14.64 7.95 2.4 8 2 2 0 1001.678 4844.4348 S1812s S1814s TMT10 1810 (R) GRsPsPIGVGSEMCREEGGEGTPVKQDLSAPPGYTLTENVAR (I) GRS(0.99)PS(0.99)PIGVGS(0.0)EMCREEGGEGT(0.0)PVKQDLS(0.0)APPGY(0.0)T(0.0)LT(0.0)ENVAR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTCL1 210777.5 1 10 1389.1 147.22 HUMAN 1 4.7903 -1.6644 GTPEEAESSEDEAGP-p Q96NA2;S314-p GTPEEAESSEDEAGP 0.796323249979386 0.254409386599836 0.0416666666666667 0.145666666666667 1.9071393267264 7.83109249114213 0.0416666666666667 0.145666666666667 0.644593715955768 0.16477478395494 0.488137739939324 1.60534781377743 Q96NA2 RILP Q96NA2.S314.p_RILP Q96NA2_S314sS315s_2_2_314_315 Q96NA2 Q96NA2|Q96NA2-2 Rab-interacting lysosomal protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30234.30234.4 15.48 13.29 6.079 5 2 2 0 1152.7902 4448.2059 S314s S315s TMT10 305 (K) MLGTPEEAEssEDEAGPWILLSDDKGDHPPPPESK (I) MLGT(0.0)PEEAES(0.99)S(0.99)EDEAGPWILLS(0.0)DDKGDHPPPPES(0.0)K K:TMT10,s:Phosphorylated S RILP 44370.8 1 3 4820.1 26.28 HUMAN 1 1.9071 7.8311 GTPEPPPSPAAGAPL-p Q13202;S322-p GTPEPPPSPAAGAPL 0.900238599734488 0.379702058752361 0.0216666666666667 -0.101333333333333 0.893725586589251 5.58925268604472 0.0216666666666667 -0.101333333333333 0.814005691254595 0.276105292462441 0.247003969000087 -1.21076014296253 Q13202 DUSP8 Q13202.S322.p_DUSP8 Q13202_S322s _1_1_322_322 Q13202 Q13202 Dual specificity protein phosphatase 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28670.28670.4 11.7 11.7 2.837 4 1 1 0 786.1613 3061.652 S322s TMT10 302 (K) LLAALQGDPGTPSGTPEPPPsPAAGAPLPR (L) LLAALQGDPGT(0.0)PS(0.0)GT(0.0)PEPPPS(0.99)PAAGAPLPR s:Phosphorylated S DUSP8 66624.4 1 1 2648.2 75.22 HUMAN 1 0.8937 -5.5893 GTPKLSDTPAPKRKR-p Q8NBZ0;T90-p GTPKLSDTPAPKRKR 0.086569904991124 0.00845407667225013 -0.480333333333333 -0.558 22.7686550919389 29.4272256650071 -0.480333333333333 -0.558 0.00528608924206005 0.00114097842807055 -4.49994956468709 -6.25007240897187 Q8NBZ0 INO80E Q8NBZ0.T90.p_INO80E Q8NBZ0_T90t _1_1_90_90 Q8NBZ0 Q8NBZ0 INO80 complex subunit E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10850.10850.2 9.22 9.22 2.259 2 1 1 0 683.8721 1286.772 T90t TMT10 87 (K) LSDtPAPK (R) LS(0.0)DT(0.99)PAPK K:TMT10,t:Phosphorylated T INO80E 26591.7 1 2 2287.1 89.59 HUMAN 1 -22.7687 -29.4272 GTPPGRASPGRASPA-p J3KQC6;S70-p GTPPGRASPGRASPA 0.534705148071304 0.456929327646581 0.104 -0.153666666666667 5.03468937312405 4.53574105786987 0.104 -0.153666666666667 0.313711950297976 0.351905370070649 1.11041134503466 -1.01805871599242 J3KQC6 NotFound J3KQC6.S70.p_NotFound J3KQC6_S70s _1_1_70_70 J3KQC6 Q9BYE2|J3KQC6|E9PRA0|Q9BYE2-2|Q9BYE2-5|Q9BYE2-3 Transmembrane protease serine 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5320.5320.3 17.8 17.8 3.475 4 1 1 0 714.6948 2062.0991 S70s TMT10 54 (R) ASPAQASPAGTPPGRAsPGR (A) AS(0.0)PAQAS(0.0)PAGT(0.0)PPGRAS(0.99)PGR s:Phosphorylated S TMPRSS13 64250 3 5 1604.1 128.27 HUMAN 1 5.0347 -4.5357 GTPPPVFTPPLPKGT-p Q6NZY4;T485-p GTPPPVFTPPLPKGT 0.123085428560858 0.0167227151287835 0.290333333333333 0.411666666666667 18.9463935193525 24.5259229957752 0.290333333333333 0.411666666666667 0.0127456106631128 0.0035270181977059 3.65639446746985 4.91871308078528 Q6NZY4 ZCCHC8 Q6NZY4.T485.p_ZCCHC8 Q6NZY4_T485t _1_1_485_485 Q6NZY4 Q6NZY4|Q6NZY4-2 Zinc finger CCHC domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25228.25228.3 12.5 12.5 5.106 2 1 1 0 629.3581 1806.093 T485t TMT10 478 (R) GTPPPVFtPPLPK (G) GT(0.0)PPPVFT(0.99)PPLPK K:TMT10,t:Phosphorylated T ZCCHC8 79203.5 3 6 443.1 311.3 HUMAN 1 18.9464 24.5259 GTPQAALSPLTPARL-p A0A087X1R1;S411-p GTPQAALSPLTPARL 0.348715504484765 0.027998823473371 0.203666666666667 -0.309 8.50295096118422 21.0429214216238 0.203666666666667 -0.309 0.141157807407948 0.00786516536040844 1.72231757905127 -4.10233706582492 A0A087X1R1 SMTN A0A087X1R1.S411.p_SMTN A0A087X1R1_S411s _1_1_411_411 A0A087X1R1 A0A087X1R1|A0A087WVP4 Smoothelin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20319.20387.3 19.13 19.13 3.776 3 1 1 0 682.3596 1965.0967 S411s TMT10 401 (R) LQDGTPQAALsPLTPAR (L) LQDGT(0.0)PQAALS(0.99)PLT(0.0)PAR s:Phosphorylated S SMTN 108527.2 2 8 826.1 217.61 HUMAN 1 8.503 -21.0429 GTQPRRLSGKDTEQI-p Q9UMX1;S301-p GTQPRRLSGKDTEQI 0.916114875747744 0.00501568000679712 0.0183333333333333 0.572333333333333 0.743849563393164 33.5325136366591 0.0183333333333333 0.572333333333333 0.842587561485091 0.000443351963645474 0.208331112188523 7.56928620325069 Q9UMX1 SUFU Q9UMX1.S301.p_SUFU Q9UMX1_S301s _1_1_301_301 Q9UMX1 Q9UMX1|Q9UMX1-3|Q9UMX1-2 Suppressor of fused homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6533.6533.4 10.08 10.08 1.143 2 1 1 0 461.007 1761.0383 S301s TMT10 299 (R) RLsGKDTEQIR (E) RLS(0.99)GKDT(0.0)EQIR K:TMT10,s:Phosphorylated S SUFU 54288.1 2 2 2747.1 71.93 HUMAN 1 0.7438 33.5325 GTQQSHSSPGEITSS-p Q5TDH0-3;S121-p GTQQSHSSPGEITSS 0.716139420956182 0.920405522725287 0.05 0.01 2.73570580957319 0.507289048742107 0.05 0.01 0.532634654218159 0.889756347894696 0.666200205980544 0.145255410937314 Q5TDH0 DDI2 Q5TDH0.3.S121.p_DDI2 Q5TDH0-3_S121s _1_1_121_121 Q5TDH0-3 Q5TDH0-3|Q5TDH0-2 Isoform 3 of Protein DDI1 homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14172.14172.4 22.13 22.13 1.155 7 1 1 0 898.9476 3512.8043 S121s TMT10 109 (R) QRQPPGTQQSHSsPGEITSSPQGLDNPALLR (D) QRQPPGT(0.0)QQS(0.0)HS(0.0)S(0.99)PGEIT(0.0)S(0.0)S(0.0)PQGLDNPALLR s:Phosphorylated S DDI2 47083.7 5 3 1918.1 107.11 HUMAN 1 2.7357 0.5073 GTQSTEGSPVSKMSV-p Q9H4H8;S462-p GTQSTEGSPVSKMSV 0.744690566487893 0.00159168462790637 0.0496666666666667 -0.896 2.42834564562603 44.875544275448 0.0496666666666667 -0.896 0.571696371023803 3.25420997863906e-05 0.601703270315191 -12.55775979291 Q9H4H8 FAM83D Q9H4H8.S462.p_FAM83D Q9H4H8_S462s _1_1_462_462 Q9H4H8 A0A087WXK8|Q9H4H8|Q9H4H8-2 Protein FAM83D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6513.6513.2 15.99 9.7 1.679 5 1 1 0 858.434 1635.8954 S462s TMT10 455 (R) GTQSTEGsPVSK (M) GT(0.0)QS(0.0)T(0.0)EGS(0.99)PVS(0.0)K K:TMT10,s:Phosphorylated S FAM83D 64879.8 2 7 1311.1 155.21 HUMAN 1 2.4283 -44.8755 GTRPQAMT_______-p A0FGR8-6;T942-p GTRPQAMT_______ 0.886118944763575 0.126073035043373 0.0276666666666667 -0.197 1.02478427181228 11.8595692760208 0.0276666666666667 -0.197 0.789808080760477 0.0651693024376269 0.280083798731681 -2.3063156714051 A0FGR8 ESYT2 A0FGR8.6.T942.p_ESYT2 A0FGR8-6_T942t_1_1_942_942 A0FGR8-6 A0FGR8-2|A0FGR8-5|A0FGR8-6|A0A087WXU3 Isoform 6 of Extended synaptotagmin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26375.26375.3 14.64 14.64 4.808 5 1 1 0 861.0457 2485.1655 M941m T942t TMT10 924 (K) GWTQWYDLTEDGTRPQAmt (-) GWT(0.0)QWY(0.0)DLT(0.0)EDGT(0.0)RPQAM(1.0)T(0.99) m:Oxidized methionine,t:Phosphorylated T ESYT2 105219.8 3 8 1886.1 109.02 HUMAN 1 1.0248 -11.8596 GTRRHLPSPPLTQEV-p Q07889;S1275-p GTRRHLPSPPLTQEV 0.904222813932841 0.412384859388658 -0.0183333333333333 0.0856666666666667 0.859524278634633 5.11707390278498 -0.0183333333333334 0.0856666666666667 0.820441409651172 0.307817006034166 -0.238260631311581 1.12523788988979 Q07889 SOS1 Q07889.S1275.p_SOS1 Q07889_S1275s _1_1_1275_1275 Q07889 Q07889|G5E9C8 Son of sevenless homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23396.23606.4 19 19 1.757 3 1 1 0 716.6322 2783.5406 S1275s TMT10 1272 (R) HLPsPPLTQEVDLHSIAGPPVPPR (Q) HLPS(0.99)PPLT(0.0)QEVDLHS(0.0)IAGPPVPPR s:Phosphorylated S SOS1 153431.2 3 7 2313.1 88.35 HUMAN 1 -0.8595 5.1171 GTRRIPVSPEQARSY-p Q9H981;S132-p GTRRIPVSPEQARSY 0.781634728956161 0.462719850454723 0.0516666666666667 0.077 2.05345232136931 4.46227941552747 0.0516666666666667 0.0770000000000001 0.623239209231772 0.357908537775334 0.520607167186257 1.00434106076719 Q9H981 ACTR8 Q9H981.S132.p_ACTR8 Q9H981_S132s _1_1_132_132 Q9H981 Q9H981|Q9H981-2 Actin-related protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8489.8489.3 13.74 13.74 99 1 1 1 0 487.9312 1381.8113 S132s TMT10 128 (R) RIPVsPEQAR (S) RIPVS(1.0)PEQAR s:Phosphorylated S ACTR8 71338.2 3 1 4629.1 28.62 HUMAN 1 2.0535 4.4623 GTRRPGVSPEGGLSV-p O95873;S131-p GTRRPGVSPEGGLSV 0.821402155666812 0.134068049684981 0.0336666666666667 -0.24 1.64366171888633 11.5015319102816 0.0336666666666667 -0.24 0.684910506169205 0.0707696110897333 0.42835787762197 -2.24315419762496 O95873 C6orf47 O95873.S131.p_C6orf47 O95873_S131s _1_1_131_131 O95873 O95873 Uncharacterized protein C6orf47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13266.13266.4 14.3 8.74 2.101 2 1 1 0 694.8772 2696.5157 S131s Hydrogen 127 (R) RPGVsPEGGLSVPGPGAPLEKPGRR (E) RPGVS(0.99)PEGGLS(0.0)VPGPGAPLEKPGRR K:TMT10-Lys-Only,s:Phosphorylated S C6orf47 31880.5 1 3 1923.1 106.86 HUMAN 1 1.6437 -11.5015 GTRSADNTLERREKH-p Q96QZ7;T1365-p GTRSADNTLERREKH 0.454119719516734 0.424427434112057 -0.179666666666667 0.083 6.32550822880244 4.9549368252165 -0.179666666666667 0.083 0.233050037483351 0.31952608444326 -1.34234965204022 1.09557378467706 Q96QZ7 MAGI1 Q96QZ7.T1365.p_MAGI1 Q96QZ7_T1365t _1_1_1365_1365 Q96QZ7 Q96QZ7|Q96QZ7-2|Q96QZ7-6|Q96QZ7-7|A0A087WT53 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4327.4327.3 9.19 9.19 9.194 2 1 1 0 457.5591 1290.6963 T1365t TMT10 1361 (R) SADNtLERR (E) S(0.0)ADNT(0.99)LERR t:Phosphorylated T MAGI1 165548 1 9 1223.1 164.72 HUMAN 1 -6.3255 4.9549 GTRVRHGSGPPSSGG-p Q9HC52;S311-p GTRVRHGSGPPSSGG 0.892526264868545 0.204234335753272 -0.0246666666666667 0.166666666666667 0.96658499751268 9.07535058196613 -0.0246666666666667 0.166666666666667 0.800463438723455 0.123727130781987 -0.265475494800174 1.8207463917093 Q9HC52 CBX8 Q9HC52.S311.p_CBX8 Q9HC52_S311s _1_1_311_311 Q9HC52 Q9HC52 Chromobox protein homolog 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5273.5481.3 17.49 17.49 5.751 4 1 1 0 546.5931 1557.7971 S311s TMT10 309 (R) HGsGPPSSGGGLYR (D) HGS(0.99)GPPS(0.0)S(0.0)GGGLY(0.0)R s:Phosphorylated S CBX8 43509.1 7 5 1574.1 130.51 HUMAN 1 -0.9666 9.0754 GTSEDIKSEGDTQSN-p O95232;S425-p GTSEDIKSEGDTQSN 0.209850580534842 0.287992045835485 -0.229333333333333 0.118333333333333 13.0897541154976 7.13344055546477 -0.229333333333333 0.118333333333333 0.0490935670670141 0.193488850471017 -2.52725278404194 1.48393381489141 O95232 LUC7L3 O95232.S425.p_LUC7L3 O95232_S425s_1_1_425_425 O95232 O95232 Luc7-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11229.11229.5 15.39 15.39 0.5 11 1 1 0 941.0468 4620.2326 N414n S425s TMT10 399 (K) QSEDTNTESKESDTKnEVNGTSEDIKsEGDTQSN (-) QS(0.0)EDT(0.0)N(0.50)T(0.0)ES(0.0)KES(0.0)DT(0.0)KN(0.50)EVN(0.0)GT(0.0)S(0.0)EDIKS(0.99)EGDT(0.0)QS(0.0)N(0.0) K:TMT10,n:Deamidated,s:Phosphorylated S LUC7L3 51864.7 8 7 1151.1 172.09 HUMAN 1 -13.0898 7.1334 GTSEIVKSPRIECSK-p Q9H501;S198-p GTSEIVKSPRIECSK 0.580625783025431 0.0108261277773817 -0.0823333333333334 -0.396 4.34307772843993 27.5453030983736 -0.0823333333333333 -0.396 0.367868182937134 0.00175982583954609 -0.9821670002469 -5.71058472717955 Q9H501 ESF1 Q9H501.S198.p_ESF1 Q9H501_S198s _1_1_198_198 Q9H501 Q9H501 ESF1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12454.12454.3 13.47 8.9 4.489 5 1 1 0 676.6981 1948.1115 S198s TMT10 187 (R) TLDSGTSEIVKsPR (I) T(0.0)LDS(0.0)GT(0.0)S(0.0)EIVKS(0.99)PR K:TMT10,s:Phosphorylated S ESF1 99193.8 13 5 500.1 291.39 HUMAN 1 -4.3431 -27.5453 GTSFLQVTPPTSQNT-p Q8ND82;T540-p GTSFLQVTPPTSQNT 0.248408747598316 0.360939777343528 0.171333333333333 0.089 11.5548364264706 5.87242584586417 0.171333333333333 0.089 0.0699063065915202 0.258676761647713 2.25361456716902 1.26150964343895 Q8ND82 ZNF280C Q8ND82.T540.p_ZNF280C Q8ND82_T540t _1_1_540_540 Q8ND82 Q8ND82 Zinc finger protein 280C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30359.30559.4 24.73 24.07 2.803 8 1 1 0 807.4007 3146.6142 T540t TMT10 523 (K) LPTAPFGCAPGTSFLQVtPPTSQNTTAR (N) LPT(0.0)APFGCAPGT(0.0)S(0.0)FLQVT(0.99)PPT(0.0)S(0.0)QNT(0.0)T(0.0)AR C:Carbamidomethylation,t:Phosphorylated T ZNF280C 84920.2 3 6 1894.1 108.64 HUMAN 1 11.5548 5.8724 GTSQMERSPMLERRH-p Q8N3V7-2;S257-p GTSQMERSPMLERRH 0.562720247963902 0.023509919426035 0.111 0.343666666666667 4.59971639855174 22.2155409385514 0.111 0.343666666666667 0.346759493679154 0.00600407220105689 1.030165161487 4.36671670837731 Q8N3V7 SYNPO Q8N3V7.2.S257.p_SYNPO Q8N3V7-2_S257s _1_1_257_257 Q8N3V7-2 Q8N3V7|Q8N3V7-2|Q8N3V7-3 Isoform 2 of Synaptopodin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15729.15729.4 11.77 11.77 3.284 4 1 1 0 732.3605 2846.4603 S257s TMT10 239 (R) TARPFGIQAPGGTSQMERsPMLER (R) T(0.0)ARPFGIQAPGGT(0.0)S(0.0)QMERS(0.99)PMLER s:Phosphorylated S SYNPO 96794.1 2 2 947.1 196.99 HUMAN 1 4.5997 22.2155 GTSSRRGSGDTSISI-p Q32MZ4-2;S120-p GTSSRRGSGDTSISI 0.559196395870671 0.257723513526797 0.0826666666666667 0.111 4.65849133276092 7.75900624453172 0.0826666666666667 0.111 0.342098261155568 0.167532618140104 1.04108591037029 1.59283582809281 Q32MZ4 LRRFIP1 Q32MZ4.2.S120.p_LRRFIP1 Q32MZ4-2_S120s _1_1_120_120 Q32MZ4-2 Q32MZ4-2|Q32MZ4-3 Isoform 2 of Leucine-rich repeat flightless-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30739.31353.5 23.63 23.63 4.023 7 1 1 0 781.4093 3823.054 S120s TMT10 118 (R) RGsGDTSISIDTEASIREIKDSLAEVEEK (Y) RGS(0.99)GDT(0.0)S(0.0)IS(0.0)IDT(0.0)EAS(0.0)IREIKDS(0.0)LAEVEEK K:TMT10,s:Phosphorylated S LRRFIP1 87029.9 49 5 235.1 419.93 HUMAN 1 4.6585 7.759 GTSVGWDSPPASPLQ-p Q13424;S189-p GTSVGWDSPPASPLQ 0.829840108703381 0.338380521161699 0.0306666666666667 -0.0966666666666667 1.55906963262656 6.23495036668715 0.0306666666666667 -0.0966666666666667 0.698381998939992 0.237960549610487 0.408778607543705 -1.32598498402987 Q13424 SNTA1 Q13424.S189.p_SNTA1 Q13424_S189s _1_1_189_189 Q13424 Q13424|Q13424-2 Alpha-1-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17520.17520.2 20.9 20.9 3.08 6 1 1 0 1162.0502 2243.1254 S189s TMT10 178 (K) NSTGGTSVGWDsPPASPLQR (Q) NS(0.0)T(0.0)GGT(0.0)S(0.0)VGWDS(0.99)PPAS(0.0)PLQR s:Phosphorylated S SNTA1 54236.6 5 1 4013.1 39.08 HUMAN 1 1.5591 -6.235 GTSVQSKSPDLEASL-p Q13111;S65-p GTSVQSKSPDLEASL 0.62273654784064 0.601775424473879 0.0986666666666667 0.0523333333333333 3.82261621607176 2.9907858320961 0.0986666666666667 0.0523333333333334 0.414704147100934 0.502251701603214 0.883066984231071 0.718439517606484 Q13111 CHAF1A Q13111.S65.p_CHAF1A Q13111_S65s _1_1_65_65 Q13111 Q13111|Q13111-3|Q13111-2 Chromatin assembly factor 1 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24731.24731.4 16.36 11.93 3.855 4 1 1 0 867.6713 3387.6891 S65s TMT10 65 (K) sPDLEASLDTLENNCHVGSDIDFRPK (L) S(0.99)PDLEAS(0.0)LDT(0.0)LENNCHVGS(0.0)DIDFRPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CHAF1A 108122.1 2 2 633.1 256.49 HUMAN 1 3.8226 2.9908 GTSVRRRSLQHQEQL-p I3L156;S16-p GTSVRRRSLQHQEQL 0.53494190060823 0.00701541983189788 -0.100666666666667 -0.839 5.0288719167114 30.8690402199108 -0.100666666666667 -0.839 0.31413245494027 0.000818645686821826 -1.10934642555329 -6.68994032776116 I3L156 NotFound I3L156.S16.p_NotFound I3L156_S16s _1_1_16_16 I3L156 I3L156|Q9BSJ6|I3L419|Q9BSJ6-2|I3L427 Protein PIMREG HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6698.6698.2 17.24 17.24 17.241 2 1 1 0 875.9147 1670.8547 S16s Hydrogen 16 (R) sLQHQEQLEDSK (E) S(0.99)LQHQEQLEDS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S PIMREG 31242.5 3 1 3320.1 53.99 HUMAN 1 -5.0289 -30.869 GTTGKAPSPPPLLTD-p Q8TDM6;S132-p GTTGKAPSPPPLLTD 0.568265545283393 0.141712750487374 0.0753333333333333 0.206333333333333 4.51877603021368 11.1819873377875 0.0753333333333334 0.206333333333333 0.353282721241031 0.0761730361352914 1.01508327080901 2.18701824069006 Q8TDM6 DLG5 Q8TDM6.S132.p_DLG5 Q8TDM6_S132s _1_1_132_132 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21292.21292.3 9.66 9.66 3.789 2 1 1 0 758.074 2192.2327 S132s TMT10 130 (K) APsPPPLLTDQQVNEK (V) APS(0.99)PPPLLT(0.0)DQQVNEK K:TMT10,s:Phosphorylated S DLG5 215575.4 2 1 34.1 890.58 HUMAN 1 4.5188 11.182 GTTKKARSDPLFSAQ-p Q9UBL3;S316-p GTTKKARSDPLFSAQ 0.668622007017775 0.462663228122581 0.0586666666666667 0.07 3.26926829147442 4.46308148278443 0.0586666666666667 0.07 0.47105668433772 0.357842444323866 0.774592646149016 1.00449106276123 Q9UBL3 ASH2L Q9UBL3.S316.p_ASH2L Q9UBL3_S316s _1_1_316_316 Q9UBL3 Q9UBL3|Q9UBL3-3|Q9UBL3-2|F5H8F7 Set1/Ash2 histone methyltransferase complex subunit ASH2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10273.10273.3 9.72 9.72 4.958 2 1 1 0 519.5986 1476.812 S316s TMT10 314 (K) ARsDPLFSAQR (L) ARS(0.99)DPLFS(0.0)AQR s:Phosphorylated S ASH2L 69349.2 3 3 3331.1 53.66 HUMAN 1 3.2693 4.4631 GTTKRPISDDDCPSA-p Q96PU4;S667-p GTTKRPISDDDCPSA 0.44366444099227 0.580889661130855 0.216333333333333 -0.207666666666667 6.5048357601132 3.18378618049507 0.216333333333333 -0.207666666666667 0.223622976603669 0.480420335247138 1.37402738395495 -0.757390317128959 Q96PU4 UHRF2 Q96PU4.S667.p_UHRF2 Q96PU4_S667s _1_1_667_667 Q96PU4 Q96PU4 E3 ubiquitin-protein ligase UHRF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7335.7335.3 15.58 15.58 6.404 3 1 1 0 662.652 1905.974 S667s TMT10 664 (K) RPIsDDDCPSASK (V) RPIS(0.99)DDDCPS(0.0)AS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UHRF2 91752.1 7 2 3288.1 54.94 HUMAN 1 6.5048 -3.1838 GTTLGYLSPKDMNQP-p Q9NUL3;S440-p GTTLGYLSPKDMNQP 0.0617660610365025 0.00499643566717022 -0.838 -0.892 26.3371340943103 33.5614944172622 -0.838 -0.892 0.00232427007429438 0.000440403293647947 -5.39060001284227 -7.57936292224675 Q9NUL3 STAU2 Q9NUL3.S440.p_STAU2 Q9NUL3_S440s _1_1_440_440 Q9NUL3 Q9NUL3|A0A0A0MTC5|Q9NUL3-2|E9PH62|E7EVJ4|Q9NUL3-7|A0A0A0MTC6|E7EPX0|Q9NUL3-3|F8VPI7|Q9NUL3-8|A0A0A0MTD1|Q9NUL3-6|A0A0A0MTC4|Q9NUL3-4|G5EA18 Double-stranded RNA-binding protein Staufen homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24731.24731.2 18.12 13.01 4.949 5 1 1 0 937.5256 1794.0777 S440s TMT10 430 (K) VISGTTLGYLsPK (D) VIS(0.0)GT(0.0)T(0.0)LGY(0.0)LS(0.99)PK K:TMT10,s:Phosphorylated S STAU2 62867.6 4 6 1170.1 170.28 HUMAN 1 -26.3371 -33.5615 GTTTTTPSPSAIKAA-p Q92733;S241-p GTTTTTPSPSAIKAA 0.367808394356231 0.0063803902699255 0.184666666666667 -0.510666666666667 8.05717382766366 31.5840065023791 0.184666666666667 -0.510666666666667 0.156416519237711 0.000694383431589808 1.64507732161204 -6.9171841668734 Q92733 PRCC Q92733.S241.p_PRCC Q92733_S241s _1_1_241_241 Q92733 Q92733 Proline-rich protein PRCC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22649.22649.3 21.14 21.14 2.883 10 1 1 0 852.1329 2474.4118 S241s TMT10 226 (K) TSSLAPVVGTTTTTPsPSAIK (A) T(0.0)S(0.0)S(0.0)LAPVVGT(0.0)T(0.0)T(0.0)T(0.0)T(0.0)PS(0.99)PS(0.0)AIK K:TMT10,s:Phosphorylated S PRCC 52416.8 1 10 1101.1 177.58 HUMAN 1 8.0572 -31.584 GTVDIVESEPENDHG-p P17010-3;S313-p GTVDIVESEPENDHG 0.917776752914955 0.12504680267232 -0.0186666666666667 0.257333333333333 0.728556304806709 11.9074355100371 -0.0186666666666667 0.257333333333333 0.84555988208597 0.0644549756983511 -0.204331474954344 2.31478242302062 P17010 ZFX P17010.3.S313.p_ZFX P17010-3_S313s _1_1_313_313 P17010-3 P17010-3|P08048|P08048-3|P08048-2|P17010-2 Isoform 3 of Zinc finger X-chromosomal protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24341.24341.4 28.75 24.35 2.195 4 1 1 0 1008.4699 3950.8577 S313s TMT10 297 (K) ADPGEDDLGGTVDIVEsEPENDHGVELLDQNSSIR (V) ADPGEDDLGGT(0.0)VDIVES(0.99)EPENDHGVELLDQNS(0.0)S(0.0)IR s:Phosphorylated S ZFX 96324.3 2 2 2932.1 65.64 HUMAN 1 -0.7286 11.9074 GTVNKRHSLEVMNSM-p Q15678;S642-p GTVNKRHSLEVMNSM 0.707493278498265 0.00626582857597616 -0.0733333333333333 0.519 2.82480447804648 31.7405152504522 -0.0733333333333334 0.519 0.521818596293118 0.000669805138484203 -0.684597793654376 6.96776601926816 Q15678 PTPN14 Q15678.S642.p_PTPN14 Q15678_S642s _1_1_642_642 Q15678 Q15678 Tyrosine-protein phosphatase non-receptor type 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10515.10515.3 11.04 11.04 11.042 2 1 1 0 589.958 1687.8933 S642s TMT10 640 (K) RHsLEVMNSMVR (G) RHS(0.99)LEVMNS(0.0)MVR s:Phosphorylated S PTPN14 136114.4 3 13 337.1 355.06 HUMAN 1 -2.8248 31.7405 GTVNRVSSPLPSPSA-p Q8WXI9;S334-p GTVNRVSSPLPSPSA 0.110880621512576 0.00479967872381982 0.329 0.586 19.9770356107014 33.8762035721642 0.329 0.586 0.0100530175084973 0.000409618575367195 3.87402369545807 7.68952732301795 Q8WXI9 GATAD2B Q8WXI9.S334.p_GATAD2B Q8WXI9_S334s _1_1_334_334 Q8WXI9 Q8WXI9|A0A0U1RRM1 Transcriptional repressor p66-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20283.20283.2 17.17 11.88 1.162 6 1 1 0 1320.1605 2559.3489 S334s TMT10 332 (R) VSsPLPSPSAMTDAANSQAAAK (L) VS(0.0)S(0.99)PLPS(0.0)PS(0.0)AMT(0.0)DAANS(0.0)QAAAK K:TMT10,s:Phosphorylated S GATAD2B 65601.9 9 5 870.1 209.9 HUMAN 1 19.977 33.8762 GTVTENMSLTDAKTL-p G3V1L9;S241-p GTVTENMSLTDAKTL 0.560135693219576 0.572609714075721 -0.078 -0.0553333333333333 4.64133634918351 3.2638730376484 -0.078 -0.0553333333333333 0.343452249399521 0.471642243163955 -1.03790105532938 -0.773402563612978 G3V1L9 TJP1 G3V1L9.S241.p_TJP1 G3V1L9_S241s _1_1_241_241 G3V1L9 G3V1L9|Q07157|G5E9E7|A0A087X0K9|Q07157-2|H0YKB1 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19707.19707.3 16.33 16.33 1.102 4 1 1 0 711.3627 2052.1047 S241s TMT10 232 (K) INGTVTENMsLTDAK (T) INGT(0.0)VT(0.0)ENMS(0.99)LT(0.0)DAK K:TMT10,s:Phosphorylated S TJP1 197797.8 1 43 41.2 827.72 HUMAN 1 -4.6413 -3.2639 GTWSSVVSGVPRLSP-p Q99700;S678-p GTWSSVVSGVPRLSP 0.996624147679768 0.0431408478280908 -0.000666666666666667 -0.290666666666667 0.0253882779476136 18.2902473697112 -0.000666666666666667 -0.290666666666667 0.99417118679913 0.0148243364483144 -0.00764891305485801 -3.51830667615433 Q99700 ATXN2 Q99700.S678.p_ATXN2 Q99700_S667sS678s_2_2_667_678 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.26231.26231.2 7.43 7.43 1.114 8 2 2 0 1352.6781 2544.4186 S667s S678s TMT10 666 (R) TsPSGGTWSSVVsGVPRLSPK (T) T(0.0)S(0.99)PS(0.0)GGT(0.0)WS(0.0)S(0.0)VVS(0.99)GVPRLS(0.0)PK K:TMT10,s:Phosphorylated S ATXN2 140907.9 6 25 176.1 481.52 HUMAN 1 -0.0254 -18.2902 GTYACSYTPVKAIKH-p O75369-8;T709-p GTYACSYTPVKAIKH 0.41330138595586 0.0477718896722835 0.143 -0.248333333333333 7.07943968859853 17.6671147380696 0.143 -0.248333333333333 0.195909741303065 0.0171115175167233 1.47491167171017 -3.39249346702217 O75369 FLNB O75369.8.T709.p_FLNB O75369-8_T709t _1_1_709_709 O75369-8 O75369-3|O75369-6|O75369-7|E7EN95|O75369-4|O75369-5|O75369-8|O75369-9|O75369-2 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15950.15950.3 14.01 14.01 1.113 5 1 1 0 677.6516 1950.9705 T709t TMT10 700 (R) MDGTYACSYtPVK (A) MDGT(0.0)Y(0.0)ACS(0.0)Y(0.0)T(0.99)PVK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T FLNB 283797.6 2 11 67.1 680.07 HUMAN 1 7.0794 -17.6671 GTYGKAVSPPPSPRA-p O15417;S991-p GTYGKAVSPPPSPRA 0.958736090069421 0.149414951986032 -0.008 0.174666666666667 0.355728727491831 10.8649213460893 -0.008 0.174666666666667 0.921355276304647 0.081942246338671 -0.10341893830463 2.13151373480736 O15417 TNRC18 O15417.S991.p_TNRC18 O15417_S991sS995sS999s_3_3_991_999 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20276.20490.3 9.2 9.2 99 3 3 3 0 781.7255 2103.269 S991s S995s S999s TMT10 989 (K) AVsPPPsPRAsPVAALK (A) AVS(1.0)PPPS(1.0)PRAS(1.0)PVAALK K:TMT10,s:Phosphorylated S TNRC18 316168 4 36 75.1 647.68 HUMAN 1 -0.3557 10.8649 GTYVQEESPEGGRFK-p E7EUN2;S366-p GTYVQEESPEGGRFK 0.31457034784631 0.561458325993011 0.145333333333333 0.0583333333333334 9.39924003385966 3.37878840214588 0.145333333333333 0.0583333333333334 0.11483545529526 0.459326138098573 1.87749858974395 0.79623208582953 E7EUN2 NotFound E7EUN2.S366.p_NotFound E7EUN2_S366s _1_1_366_366 E7EUN2 E7EUN2|Q96P47-4|Q96P47-2|Q9UPQ3|Q9UPQ3-2|F5GXM9|A0A087X1U1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16244.16244.4 16.81 16.81 3.105 5 1 1 0 739.8917 2876.5761 S366s TMT10 356 (R) YLTGTYVQEEsPEGGRFKK (E) Y(0.0)LT(0.0)GT(0.0)Y(0.0)VQEES(0.99)PEGGRFKK K:TMT10,s:Phosphorylated S AGAP1 117700.5 2 11 1235.1 163.67 HUMAN 1 9.3992 3.3788 GVAEYRASEGKTVEV-p Q9P2T1-2;S306-p GVAEYRASEGKTVEV 0.0332552830156115 0.05155187738701 -0.684333333333333 -0.232333333333333 34.5439991852346 17.1866225268291 -0.684333333333333 -0.232333333333333 0.000351236856360053 0.019113391137412 -7.94297854520538 -3.29693576602783 Q9P2T1 GMPR2 Q9P2T1.2.S306.p_GMPR2 Q9P2T1-2_S306s _1_1_306_306 Q9P2T1-2 Q9P2T1-2|F8WAN9|A0A087WWM4|H0YLV5|Q9P2T1-3|H0YMB3 Isoform 2 of GMP reductase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10403.10403.3 14.64 14.64 14.639 3 1 1 0 666.0027 1916.0278 S306s TMT10 296 (K) YAGGVAEYRAsEGK (T) Y(0.0)AGGVAEY(0.0)RAS(0.99)EGK K:TMT10,s:Phosphorylated S GMPR2 40374.6 1 4 3774.1 43.4 HUMAN 1 -34.544 -17.1866 GVAFRAPSIHGGSGG-p P08727;S35-p GVAFRAPSIHGGSGG 0.172579420231791 0.857443441311734 0.331 -0.0273333333333333 15.1920945052285 0.941032428177655 0.331 -0.0273333333333333 0.0302545396736242 0.805187005064124 2.91455690778518 -0.258995606120717 P08727 KRT19 P08727.S35.p_KRT19 P08727_S35s _1_1_35_35 P08727 P08727 Keratin, type I cytoskeletal 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16463.17085.4 18.88 13.89 4.966 2 1 1 0 534.7729 2056.1038 S35s TMT10 25 (R) FGPGVAFRAPsIHGGSGGR (G) FGPGVAFRAPS(0.99)IHGGS(0.0)GGR s:Phosphorylated S KRT19 44105.2 64 6 383.1 334.07 HUMAN 1 15.1921 -0.941 GVANRSASIRIPRTV-p P15104;S322-p GVANRSASIRIPRTV 0.248650960362662 0.0185337296351753 -0.369333333333333 -0.336666666666667 11.5402225633816 23.8352706682459 -0.369333333333333 -0.336666666666667 0.0701419351782483 0.00413497542861437 -2.25103812078286 -4.7491363977022 P15104 GLUL P15104.S322.p_GLUL P15104_S322s _1_1_322_322 P15104 P15104 Glutamine synthetase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10133.10133.3 7.95 4.99 1.221 2 1 1 0 403.5617 1128.7051 S322s TMT10 320 (R) SAsIRIPR (T) S(0.0)AS(0.99)IRIPR s:Phosphorylated S GLUL 42691.3 1 1 5499.1 18.75 HUMAN 1 -11.5402 -23.8353 GVARGFASPLGAGRA-p Q8TDN4;S168-p GVARGFASPLGAGRA 0.188305136412999 0.0515803938656975 0.311333333333333 -0.23 14.2288072947043 17.1817841359673 0.311333333333333 -0.23 0.0377675898021309 0.0191346968629085 2.73502545694467 -3.29597977767454 Q8TDN4 CABLES1 Q8TDN4.S168.p_CABLES1 Q8TDN4_S168s _1_1_168_168 Q8TDN4 Q8TDN4 CDK5 and ABL1 enzyme substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14327.14327.2 12.32 12.32 99 1 1 1 0 621.3161 1161.6578 S168s TMT10 165 (R) GFAsPLGAGR (A) GFAS(1.0)PLGAGR s:Phosphorylated S CABLES1 68282.3 1 1 1243.1 162.91 HUMAN 1 14.2288 -17.1818 GVCEPLKSPQRAEAD-p Q9UHF7-2;S140-p GVCEPLKSPQRAEAD 0.370486218028891 0.958529277937437 -0.147333333333333 0.012 7.99602483564322 0.264944340460997 -0.147333333333333 0.0120000000000001 0.158634453375386 0.940817887558969 -1.63447101432197 0.0777469253143547 Q9UHF7 TRPS1 Q9UHF7.2.S140.p_TRPS1 Q9UHF7-2_S140s_1_1_140_140 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RJ97 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22175.22175.5 27.45 25.87 1.905 7 1 1 0 1064.7079 5223.531 S140s M152m TMT10 122 (R) NMLAFSSPAAGGVCEPLKsPQRAEADDPQDmACTPSGDSLETK (E) NM(0.0)LAFS(0.0)S(0.0)PAAGGVCEPLKS(0.99)PQRAEADDPQDM(0.99)ACT(0.0)PS(0.0)GDS(0.0)LET(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,m:Oxidized methionine TRPS1 145246 6 5 14.1 1150.14 HUMAN 1 -7.996 0.2649 GVCPEPPSPGPALVK-p A4D1S0;S95-p GVCPEPPSPGPALVK 0.65696749327268 0.0361924214072748 0.077 -0.28 3.42406018273436 19.4039112204688 0.077 -0.28 0.45456289439656 0.0114712006924052 0.805302704711345 -3.74879978657833 A4D1S0 KLRG2 A4D1S0.S95.p_KLRG2 A4D1S0_S95s _1_1_95_95 A4D1S0 A4D1S0|A4D1S0-2 Killer cell lectin-like receptor subfamily G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31035.31035.4 19.65 19.65 4.993 3 1 1 0 809.6988 3155.8055 S95s TMT10 80 (R) VPPLSLGYGVCPEPPsPGPALVKLPR (N) VPPLS(0.0)LGY(0.0)GVCPEPPS(0.99)PGPALVKLPR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KLRG2 43534.4 5 6 945.1 197.69 HUMAN 1 3.4241 -19.4039 GVCVSRTSPTPPESA-p Q5M775;S810-p GVCVSRTSPTPPESA 0.240000233645501 0.0157882991038646 -0.173 -0.347333333333333 11.8460224984506 24.9008053385557 -0.173 -0.347333333333333 0.06537289986033 0.00323533656561649 -2.30505271269268 -5.01247374397078 Q5M775 SPECC1 Q5M775.S810.p_SPECC1 Q5M775_S810s _1_1_810_810 Q5M775 Q5M775|Q5M775-4 Cytospin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11098.11098.2 14.38 10.29 1.41 6 1 1 0 927.4872 1773.9999 S810s TMT10 809 (R) TsPTPPESATTVK (S) T(0.0)S(0.99)PT(0.0)PPES(0.0)AT(0.0)T(0.0)VK K:TMT10,s:Phosphorylated S SPECC1 119267.5 9 18 330.1 358.68 HUMAN 1 -11.846 -24.9008 GVDEQSDSSEESEEE-p P35269;S307-p GVDEQSDSSEESEEE 0.108727233162321 0.00488322175391975 -0.4925 1.4965 20.1903103480175 33.7596558649928 -0.4925 1.4965 0.00957125672390209 0.000420759968089162 -3.91991257285749 7.64857129040358 P35269 GTF2F1 P35269.S307.p_GTF2F1 P35269_S307sS308s_2_2_307_308 P35269 P35269 General transcription factor IIF subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11626.11626.5 13.84 13.84 1.176 4 2 2 0 866.59 4168.9711 S307s S308s TMT10 300 (K) GVDEQSDssEESEEEKPPEEDKEEEEEK (K) GVDEQS(0.0)DS(0.99)S(0.99)EES(0.0)EEEKPPEEDKEEEEEK K:TMT10,s:Phosphorylated S GTF2F1 58296.5 3 13 1159.1 171.17 HUMAN 2 -20.1903 33.7597 GVDFKIRTVEINGEK-p Q15286;T49-p GVDFKIRTVEINGEK 0.207329300357563 0.0415377479926697 0.203666666666667 0.263666666666667 13.2049414209614 18.5198858218581 0.203666666666667 0.263666666666667 0.0478085814681088 0.0140608449029246 2.54806269348267 3.56522941629547 Q15286 RAB35 Q15286.T49.p_RAB35 Q15286_T49t _1_1_49_49 Q15286 Q15286|Q15286-2 Ras-related protein Rab-35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12516.12516.3 8.33 8.33 99 1 1 1 0 566.3193 1616.9736 T49t TMT10 47 (K) IRtVEINGEK (V) IRT(1.0)VEINGEK K:TMT10,t:Phosphorylated T RAB35 23310.1 1 15 2008.5 102.72 HUMAN 1 13.2049 18.5199 GVDIVVGTPGRLDDL-p Q92499;T346-p GVDIVVGTPGRLDDL 0.962868290580714 0.0302131588935149 -0.008 0.283 0.316788906477782 20.5632870845491 -0.00800000000000001 0.283 0.929653501429108 0.0087835745469951 -0.0924675759853619 3.99701891093046 Q92499 DDX1 Q92499.T346.p_DDX1 Q92499_T346t _1_1_346_346 Q92499 Q92499|F1T0B3|A0A087X2G1|Q92499-2|Q92499-3 ATP-dependent RNA helicase DDX1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34570.34570.4 17.29 17.29 3.723 4 1 1 0 859.4596 3354.8521 T346t TMT10 331 (R) DQLSVLENGVDIVVGtPGRLDDLVSTGK (L) DQLS(0.0)VLENGVDIVVGT(0.99)PGRLDDLVS(0.0)T(0.0)GK K:TMT10,t:Phosphorylated T DDX1 83400.6 2 1 2710.1 73.19 HUMAN 1 -0.3168 20.5633 GVDLSMASPKLVTSD-p Q8IUD6;S184-p GVDLSMASPKLVTSD 0.0182939562428931 0.0019312240857934 -1.16733333333333 -0.871333333333333 40.8505852387091 42.5542498083113 -1.16733333333333 -0.871333333333334 8.2213185512336e-05 5.55360540714654e-05 -10.5456954219988 -11.3421024212659 Q8IUD6 RNF135 Q8IUD6.S184.p_RNF135 Q8IUD6_S184s _1_1_184_184 Q8IUD6 Q8IUD6 E3 ubiquitin-protein ligase RNF135 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22602.22602.3 18.67 17.31 3.334 4 1 1 0 645.6621 1855.0036 S184s TMT10 173 (K) AFSSGVDLSMAsPK (L) AFS(0.0)S(0.0)GVDLS(0.0)MAS(0.99)PK K:TMT10,s:Phosphorylated S RNF135 48857.4 1 2 4688.1 27.93 HUMAN 1 -40.8506 -42.5542 GVDPGCMSPDVKNSI-p E9PC47;S240-p GVDPGCMSPDVKNSI 0.434304877712095 0.00839507320642349 -0.114666666666667 -0.49 6.6719285471229 29.5042468169077 -0.114666666666667 -0.49 0.215182597325146 0.00112092180718079 -1.40345477279676 -6.2729688267391 E9PC47 NotFound E9PC47.S240.p_NotFound E9PC47_S240s _1_1_240_240 E9PC47 E9PC47|P53667|P53667-2|P53667-4|P53667-3 LIM domain kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17052.17052.3 17.78 14.88 99 1 1 1 0 676.3303 1947.008 S240s TMT10 231 (R) VQGVDPGCMsPDVK (N) VQGVDPGCMS(1.0)PDVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LIMK1 77009.3 1 1 2794.1 70.37 HUMAN 1 -6.6719 -29.5042 GVDSVSHTPTPSTPA-p I3L2J0;T755-p GVDSVSHTPTPSTPA 0.877193175458751 0.0366883908325341 0.0263333333333333 0.306666666666667 1.1174821088533 19.3112864942212 0.0263333333333333 0.306666666666667 0.77312868880625 0.0117184818194556 0.303093399057654 3.72934179034275 I3L2J0 NotFound I3L2J0.T755.p_NotFound I3L2J0_T755t _1_1_755_755 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15081.15081.3 17.41 17.41 1.782 9 1 1 0 909.425 2646.2845 T755t TMT10 742 (K) SDSLDSGVDSVSHtPTPSTPAGFR (A) S(0.0)DS(0.0)LDS(0.0)GVDS(0.0)VS(0.0)HT(0.99)PT(0.0)PS(0.0)T(0.0)PAGFR t:Phosphorylated T CIC 259056.7 1 15 23.1 999.57 HUMAN 1 1.1175 19.3113 GVEDTEWSNTQTEEA-p Q99986;S376-p GVEDTEWSNTQTEEA 0.181776097173604 0.0438948444406822 0.213 0.443666666666667 14.5803301173013 18.1860114118385 0.213 0.443666666666667 0.0348310838115653 0.0151844427616108 2.80010603231651 3.497108321417 Q99986 VRK1 Q99986.S376.p_VRK1 Q99986_S376s _1_1_376_376 Q99986 Q99986 Serine/threonine-protein kinase VRK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17858.17858.3 23.14 23.14 1.145 6 1 1 0 1225.2375 3593.7495 S376s TMT10 361 (K) EIEESKEPGVEDTEWsNTQTEEAIQTR (S) EIEES(0.0)KEPGVEDT(0.0)EWS(0.99)NT(0.0)QT(0.0)EEAIQT(0.0)R K:TMT10,s:Phosphorylated S VRK1 45817.5 3 2 2921.1 65.92 HUMAN 1 14.5803 18.186 GVEFATRSIQVDGKT-p Q15907;S52-p GVEFATRSIQVDGKT 0.761479033330472 0.111748608816399 -0.0956666666666667 0.217333333333333 2.26609081277262 12.5627804525878 -0.0956666666666667 0.217333333333333 0.593459270944471 0.0554270742535485 -0.56695541046562 2.43129197781362 Q15907 RAB11B Q15907.S52.p_RAB11B Q15907_S52s _1_1_52_52 Q15907 Q15907|P62491 Ras-related protein Rab-11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11816.11816.2 10.77 5.06 99 1 1 1 0 642.852 1204.7302 S52s TMT10 52 (R) sIQVDGK (T) S(1.0)IQVDGK K:TMT10,s:Phosphorylated S RAB11B 24602.2 1 4 2989.1 63.94 HUMAN 1 -2.2661 12.5628 GVEICIATPGRLIDF-p A0A1W2PQ51;T301-p GVEICIATPGRLIDF 0.833124060837715 0.0575073175770347 0.034 -0.220333333333333 1.52814301545438 16.5245731785533 0.034 -0.220333333333333 0.703373008392197 0.0222608981252453 0.401570655000562 -3.16724362848338 A0A1W2PQ51 NotFound A0A1W2PQ51.T301.p_NotFound A0A1W2PQ51_T301t _1_1_301_301 A0A1W2PQ51 A0A1W2PQ51|Q92841|A0A1X7SBZ2|Q92841-2|Q92841-3|Q92841-1 Probable ATP-dependent RNA helicase DDX17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17682.17682.2 14.95 10.31 99 1 1 1 0 741.3735 1401.7722 T301t TMT10 294 (R) GVEICIAtPGR (L) GVEICIAT(1.0)PGR C:Carbamidomethylation,t:Phosphorylated T DDX17 81140.9 2 2 2075.2 99 HUMAN 1 1.5281 -16.5246 GVEKCSDSQSWEDIA-p Q12888-2;S789-p GVEKCSDSQSWEDIA 0.710488445890013 0.00666530425695377 -0.0716666666666667 0.514333333333333 2.79154607610161 31.2659742262447 -0.0716666666666667 0.514333333333334 0.525830039056249 0.00074714101381811 -0.677745321185086 6.81533213376045 Q12888 TP53BP1 Q12888.2.S789.p_TP53BP1 Q12888-2_S789s_1_1_789_789 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22306.22306.3 13.63 7.65 1.117 4 1 1 0 1368.9865 4023.9519 S789s N805n TMT10 786 (K) CSDsQSWEDIAPEIEPCAEnRLDTKEEK (S) CS(0.0)DS(0.99)QS(0.0)WEDIAPEIEPCAEN(1.0)RLDT(0.0)KEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated TP53BP1 216167.2 11 34 3.1 2297.07 HUMAN 1 -2.7915 31.266 GVENRAYSQEEITQG-p Q8NFJ5;S301-p GVENRAYSQEEITQG 0.424064582948113 0.147187827424767 0.130333333333333 0.151666666666667 6.8679247881275 10.9549306148058 0.130333333333333 0.151666666666667 0.205687320760681 0.0802614383764086 1.43787376080155 2.14725192475362 Q8NFJ5 GPRC5A Q8NFJ5.S301.p_GPRC5A Q8NFJ5_S301s _1_1_301_301 Q8NFJ5 Q8NFJ5 Retinoic acid-induced protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26902.26902.4 27.63 24.49 3.668 9 1 1 0 1146.7924 4504.1985 S301s TMT10 299 (R) AYsQEEITQGFEETGDTLYAPYSTHFQLQNQPPQK (E) AY(0.0)S(0.99)QEEIT(0.0)QGFEET(0.0)GDT(0.0)LY(0.0)APY(0.0)S(0.0)T(0.0)HFQLQNQPPQK K:TMT10,s:Phosphorylated S GPRC5A 40649.7 7 1 4710.1 27.63 HUMAN 1 6.8679 10.9549 GVEPGRCSGSEPSSS-p Q96EZ8;S85-p GVEPGRCSGSEPSSS 0.496230396861606 0.0932341293817583 -0.105 -0.201333333333333 5.60374153909428 13.6283552673862 -0.105 -0.201333333333333 0.275185689870781 0.0433675085979405 -1.21363693480788 -2.62341023571869 Q96EZ8 MCRS1 Q96EZ8.S85.p_MCRS1 Q96EZ8_S85s _1_1_85_85 Q96EZ8 Q96EZ8-2|Q96EZ8-3 Microspherule protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6087.6087.4 11.28 11.28 1.111 6 1 1 0 733.6167 2851.4823 S85s TMT10 73 (R) AKGASGVEPGRCsGSEPSSSEK (K) AKGAS(0.0)GVEPGRCS(0.99)GS(0.0)EPS(0.0)S(0.0)S(0.0)EK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MCRS1 52030.6 4 2 892.1 204.48 HUMAN 1 -5.6037 -13.6284 GVGAVMDSMELERQR-p Q96RP9-2;S91-p GVGAVMDSMELERQR 0.142614683369984 0.0127124067900697 0.263 0.428333333333333 17.2776398427768 26.4263565314961 0.263 0.428333333333333 0.0187169903191132 0.00227700690101378 3.31751996135807 5.40708289907251 Q96RP9 GFM1 Q96RP9.2.S91.p_GFM1 Q96RP9-2_S91s _1_1_91_91 Q96RP9-2 Q96RP9-2|C9IZ01|F8WAU4 Isoform 2 of Elongation factor G, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17251.17251.3 13.78 13.78 99 1 1 1 0 744.6997 2152.1142 S91s TMT10 81 (K) GKDGVGAVMDsMELER (Q) GKDGVGAVMDS(1.0)MELER K:TMT10,s:Phosphorylated S GFM1 86552.3 4 1 4145.1 36.72 HUMAN 1 17.2776 26.4264 GVGGGAGSEDSGDRG-p Q06587;S229-p GVGGGAGSEDSGDRG 0.129833374121164 0.354106254568706 0.364333333333333 0.342666666666667 18.3411388640423 5.97768684774314 0.364333333333333 0.342666666666667 0.014651635761343 0.252482519435917 3.53163720200922 1.28028413523065 Q06587 RING1 Q06587.S229.p_RING1 Q06587_S229s _1_1_229_229 Q06587 Q06587|Q06587-2 E3 ubiquitin-protein ligase RING1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5885.5885.3 8.35 8.35 1.179 6 1 1 0 901.7177 2623.1778 S229s TMT10 205 (R) GGGAGGSSVGTGGGGTGGVGGGAGsEDSGDR (G) GGGAGGS(0.0)S(0.0)VGT(0.0)GGGGT(0.0)GGVGGGAGS(0.99)EDS(0.0)GDR s:Phosphorylated S RING1 42999.1 1 5 1195.1 167.38 HUMAN 1 18.3411 5.9777 GVGGKRRSMEVKPAQ-p Q12789;S1632-p GVGGKRRSMEVKPAQ 0.96915478726984 0.135464638890742 0.0113333333333333 -0.456333333333333 0.265751175486438 11.4433546305701 0.0113333333333333 -0.456333333333333 0.940643118053804 0.0717240057904582 0.0779842263627411 -2.23291812129898 Q12789 GTF3C1 Q12789.S1632.p_GTF3C1 Q12789_S1632s _1_1_1632_1632 Q12789 Q12789|Q12789-3 General transcription factor 3C polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15206.15206.3 19.94 19.94 11.43 4 1 1 0 795.7265 2305.1994 S1632s Hydrogen 1632 (R) sMEVKPAQASHTNYLLMR (G) S(0.99)MEVKPAQAS(0.0)HT(0.0)NY(0.0)LLMR K:TMT10-Lys-Only,s:Phosphorylated S GTF3C1 241209.8 1 9 225.1 425.73 HUMAN 1 0.2658 -11.4434 GVGQADWTPDLGLRN-p Q9C0C2;T1282-p GVGQADWTPDLGLRN 0.820904102287946 0.0115555268629353 0.0516666666666667 -0.398333333333333 1.6485936389817 27.1070544208564 0.0516666666666667 -0.398333333333333 0.684133151921743 0.00194667995926431 0.429493358149741 -5.59024098607205 Q9C0C2 TNKS1BP1 Q9C0C2.T1282.p_TNKS1BP1 Q9C0C2_T1282t _1_1_1282_1282 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23467.23467.2 16.66 16.66 99 1 1 1 0 897.4452 1713.9122 T1282t TMT10 1275 (R) GVGQADWtPDLGLR (N) GVGQADWT(1.0)PDLGLR t:Phosphorylated T TNKS1BP1 182819.3 3 55 4.1 2105.7 HUMAN 1 1.6486 -27.1071 GVGQTDWSGVEAGEF-p Q9C0C2;S1261-p GVGQTDWSGVEAGEF 0.307216427654246 0.0599204784084767 -0.144666666666667 -0.329 9.58140613071749 16.2874085142653 -0.144666666666667 -0.329 0.110118271796508 0.0235103529250122 -1.90906893898171 -3.12131726157984 Q9C0C2 TNKS1BP1 Q9C0C2.S1261.p_TNKS1BP1 Q9C0C2_S1261s _1_1_1261_1261 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26824.26824.3 16.64 16.64 3.988 3 1 1 0 845.4119 2454.2553 S1261s TMT10 1252 (R) ESGVGQTDWsGVEAGEFLK (S) ES(0.0)GVGQT(0.0)DWS(0.99)GVEAGEFLK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 1 54 4.1 2105.7 HUMAN 1 -9.5814 -16.2874 GVGTGPPSPIALPPL-p Q92630;S48-p GVGTGPPSPIALPPL 0.17801215785102 0.248848116457815 -0.218666666666667 -0.145666666666667 14.8236731593531 7.95900966341065 -0.218666666666667 -0.145666666666667 0.0329331053986418 0.159992282290431 -2.84544588331066 -1.62753597300425 Q92630 DYRK2 Q92630.S48.p_DYRK2 Q92630_S48s _1_1_48_48 Q92630 Q92630 Dual specificity tyrosine-phosphorylation-regulated kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24624.24848.3 14.29 14.29 2.692 3 1 1 0 642.3539 1845.0796 S48s TMT10 40 (R) SGVGTGPPsPIALPPLR (A) S(0.0)GVGT(0.0)GPPS(0.99)PIALPPLR s:Phosphorylated S DYRK2 67163.9 2 2 3752.1 43.88 HUMAN 1 -14.8237 -7.959 GVGVPGGSPGSRHRQ-p Q70J99-3;S150-p GVGVPGGSPGSRHRQ 0.320193143764109 0.79956065074023 0.144333333333333 0.0286666666666667 9.25695196312527 1.35841899083066 0.144333333333333 0.0286666666666667 0.118660125597668 0.731405296404141 1.85285202392347 0.361478051937775 Q70J99 UNC13D Q70J99.3.S150.p_UNC13D Q70J99-3_S150s _1_1_150_150 Q70J99-3 Q70J99-3|Q70J99-2 Isoform 3 of Protein unc-13 homolog D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.32391.33004.3 25.68 25.68 1.565 5 1 1 0 1039.4917 3036.4934 S150s TMT10 127 (K) DVSGFSDPYCLLGIEQGVGVPGGsPGSR (H) DVS(0.0)GFS(0.0)DPY(0.0)CLLGIEQGVGVPGGS(0.99)PGS(0.0)R C:Carbamidomethylation,s:Phosphorylated S UNC13D 129958.1 17 1 2704.1 73.39 HUMAN 1 9.257 1.3584 GVHTVPGSPQARHRT-p Q9HBL0;S1177-p GVHTVPGSPQARHRT 0.419598745385739 0.235372108343368 0.26 -0.153 6.96123930281161 8.27308577801123 0.26 -0.153 0.201314969545558 0.148830322284287 1.45422663789112 -1.68195110243994 Q9HBL0 TNS1 Q9HBL0.S1177.p_TNS1 Q9HBL0_S1177s _1_1_1177_1177 Q9HBL0 Q9HBL0|E9PF55|E9PGF5|A0A087WWW7|H0Y4U1 Tensin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14671.14671.3 19.47 19.47 2.523 3 1 1 0 706.6951 2038.1031 S1177s TMT10 1164 (R) AQFSVAGVHTVPGsPQAR (H) AQFS(0.0)VAGVHT(0.0)VPGS(0.99)PQAR s:Phosphorylated S TNS1 186610.9 1 38 183.2 477.16 HUMAN 1 6.9612 -8.2731 GVIDSKGSFNDKRKK-p Q15700-2;S732-p GVIDSKGSFNDKRKK 0.552777326044719 0.062818847684094 -0.124 0.304666666666667 4.75137979545679 16.0014836255201 -0.124 0.304666666666667 0.334859034310878 0.0251102847395115 -1.05829372044878 3.06630827054543 Q15700 DLG2 Q15700.2.S732.p_DLG2 Q15700-2_S732s _1_1_732_732 Q15700-2 Q15700-2|Q15700-4|E9PIW2 Isoform 2 of Disks large homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17270.17270.5 14.47 14.47 1.431 2 1 1 0 564.9155 2740.5804 S732s TMT10 720 (K) FNAKPGVIDSKGsFNDK (R) FNAKPGVIDS(0.0)KGS(0.99)FNDK K:TMT10,s:Phosphorylated S DLG2 110110.9 3 34 196.4 460.79 HUMAN 1 -4.7514 16.0015 GVIQDRFSPTMGRHR-p P78344;S395-p GVIQDRFSPTMGRHR 0.659408715826103 0.219932987075571 0.065 -0.189666666666667 3.39309021140679 8.65873074621111 0.065 -0.189666666666667 0.45781601296432 0.136184263165263 0.799182497217848 -1.74868508352471 P78344 EIF4G2 P78344.S395.p_EIF4G2 P78344_S395s_1_1_395_395 P78344 P78344|P78344-2|H0Y3P2 Eukaryotic translation initiation factor 4 gamma 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33349.33349.5 28.93 22.56 1.166 4 1 1 0 769.7692 3748.8447 M378m S395s TMT10 366 (R) DPLGGLADMFGQmPGSGIGTGPGVIQDRFsPTMGR (H) DPLGGLADM(0.0)FGQM(0.99)PGS(0.0)GIGT(0.0)GPGVIQDRFS(0.99)PT(0.0)M(0.0)GR m:Oxidized methionine,s:Phosphorylated S EIF4G2 102873.5 11 5 1107.1 176.26 HUMAN 1 3.3931 -8.6587 GVIRGQPSPLAQVQQ-p P45983-2;S377-p GVIRGQPSPLAQVQQ 0.506609842161293 0.0110276191395254 0.217 -0.801333333333333 5.44691678246868 27.4242716186219 0.217 -0.801333333333333 0.285304302970852 0.00180955937688413 1.18536410813789 -5.67715635947182 P45983 MAPK8 P45983.2.S377.p_MAPK8 P45983-2_S377s _1_1_377_377 P45983-2 P45983-2 Isoform 1 of Mitogen-activated protein kinase 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13830.13830.2 8.19 8.19 99 1 1 1 0 731.3697 1381.7637 S377s TMT10 374 (R) GQPsPLAQVQQ (-) GQPS(1.0)PLAQVQQ s:Phosphorylated S MAPK8 44684.9 1 1 5907.1 15.45 HUMAN 1 5.4469 -27.4243 GVITDQNSDGYCQTG-p P15924;S53-p GVITDQNSDGYCQTG 0.193104490434051 0.0213452317885111 0.284 0.337666666666667 13.9438034670128 22.8435320087001 0.284 0.337666666666667 0.0403292042896347 0.00519573268679519 2.68260649740524 4.51252605856974 P15924 DSP P15924.S53.p_DSP P15924_S53s _1_1_53_53 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11989.11989.3 21.39 21.39 3.973 6 1 1 0 800.3461 2319.0543 S53s TMT10 46 (R) GVITDQNsDGYCQTGTMSR (H) GVIT(0.0)DQNS(0.99)DGY(0.0)CQT(0.0)GT(0.0)MS(0.0)R C:Carbamidomethylation,s:Phosphorylated S DSP 334221.3 5 2 104.1 590.4 HUMAN 1 13.9438 22.8435 GVKCATITPDEKRVE-p O75874;T77-p GVKCATITPDEKRVE 0.376746768297789 0.355134238261934 -0.139333333333333 0.104333333333333 7.83829098140597 5.96281662279466 -0.139333333333333 0.104333333333333 0.164501893725558 0.253348500240795 -1.60709534199488 1.27763464958855 O75874 IDH1 O75874.T77.p_IDH1 O75874_T77t _1_1_77_77 O75874 O75874 Isocitrate dehydrogenase [NADP] cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10771.10771.3 8.45 8.45 3.184 2 1 1 0 524.9299 1492.8082 T77t TMT10 73 (K) CATItPDEK (R) CAT(0.0)IT(0.99)PDEK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T IDH1 46943.7 1 1 5575.1 18.05 HUMAN 1 -7.8383 5.9628 GVKGRSISMKAPTTS-p Q70EL4;S796-p GVKGRSISMKAPTTS 0.785321801685938 0.323405288051614 0.0556666666666666 -0.126333333333333 2.02171993320536 6.48267725894516 0.0556666666666667 -0.126333333333333 0.627809678574352 0.224766857717481 0.51360672009399 -1.36976787659429 Q70EL4 USP43 Q70EL4.S796.p_USP43 Q70EL4_S796s _1_1_796_796 Q70EL4 Q70EL4|Q70EL4-2|Q70EL4-4|Q70EL4-3 Ubiquitin carboxyl-terminal hydrolase 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7348.7348.3 9.87 7.99 1.131 5 1 1 0 496.5891 1407.7827 S796s Hydrogen 794 (R) SIsMKAPTTSR (A) S(0.0)IS(0.99)MKAPT(0.0)T(0.0)S(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S USP43 124119.2 4 6 817.1 219.69 HUMAN 1 2.0217 -6.4827 GVKKVAKSPKKAKAA-p P16401;S173-p GVKKVAKSPKKAKAA 0.619741134857635 0.00130863864856926 -0.092 -1.02166666666667 3.8624648778083 46.9193297283089 -0.092 -1.02166666666667 0.410916435550994 2.03267070050708e-05 -0.890746661810131 -13.728702751627 P16401 HIST1H1B P16401.S173.p_HIST1H1B P16401_S173s _1_1_173_173 P16401 P16401|P16403 Histone H1.5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6105.6105.4 7.47 2.04 99 1 1 1 0 528.5976 2031.4027 S173s TMT10 169 (K) KVAKsPKK (A) KVAKS(1.0)PKK K:TMT10,s:Phosphorylated S HIST1H1B 22579.8 1 11 738.2 234.77 HUMAN 1 -3.8625 -46.9193 GVKPRYISGTVRGRE-p Q9Y6D6;S1070-p GVKPRYISGTVRGRE 0.0608497647854506 0.00296875316905838 -0.453333333333333 -0.638 26.5999595589233 38.0866039033758 -0.453333333333333 -0.638 0.0021877819962663 0.000155360142053957 -5.46074817984546 -9.3031722078687 Q9Y6D6 ARFGEF1 Q9Y6D6.S1070.p_ARFGEF1 Q9Y6D6_S1070s _1_1_1070_1070 Q9Y6D6 Q9Y6D6 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10089.10089.2 7.44 2.69 1.122 3 1 1 0 552.7868 1024.5989 S1070s TMT10 1068 (R) YIsGTVR (G) Y(0.0)IS(0.99)GT(0.0)VR s:Phosphorylated S ARFGEF1 210988.4 1 10 381.1 335.01 HUMAN 1 -26.6 -38.0866 GVKQEQLSPRGQAGP-p Q9Y618;S1181-p GVKQEQLSPRGQAGP 0.421053324853859 0.71884048702523 0.115 -0.0656666666666667 6.92060271054967 1.9743966093456 0.115 -0.0656666666666667 0.203207498156002 0.634688075772079 1.44710785568704 -0.503066356672144 Q9Y618 NCOR2 Q9Y618.S1181.p_NCOR2 Q9Y618_S1181s _1_1_1181_1181 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19265.19265.4 16 12.27 3.774 4 1 1 0 803.6624 3131.6647 S1181s TMT10 1177 (K) QEQLsPRGQAGPPESLGVPTAQEASVLR (G) QEQLS(0.99)PRGQAGPPES(0.0)LGVPT(0.0)AQEAS(0.0)VLR s:Phosphorylated S NCOR2 275540.8 11 15 16.1 1053.89 HUMAN 1 6.9206 -1.9744 GVKTRYLSGSGRERE-p Q9Y6D5;S1015-p GVKTRYLSGSGRERE 0.377817099053619 0.00555300786722724 -0.165 -0.709 7.81575139737823 32.6903792012104 -0.165 -0.709 0.165357866504909 0.000538222785915861 -1.60318129542245 -7.28139298911595 Q9Y6D5 ARFGEF2 Q9Y6D5.S1015.p_ARFGEF2 Q9Y6D5_S1015s _1_1_1015_1015 Q9Y6D5 Q9Y6D5 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6915.6915.2 7.38 3.23 1.148 3 1 1 0 524.7558 968.5363 S1015s TMT10 1013 (R) YLsGSGR (E) Y(0.0)LS(0.99)GS(0.0)GR s:Phosphorylated S ARFGEF2 204545.1 2 6 205.1 448.88 HUMAN 1 -7.8158 -32.6904 GVKTTPESPPYSSGS-p Q96MY1;S130-p GVKTTPESPPYSSGS 0.375400137942411 0.853973673166379 -0.153333333333333 -0.0196666666666666 7.87177844379089 0.965685777597578 -0.153333333333333 -0.0196666666666666 0.163238334706176 0.800629194269099 -1.61290946369559 -0.265222775230566 Q96MY1 NOL4L Q96MY1.S130.p_NOL4L Q96MY1_S130s _1_1_130_130 Q96MY1 A0A087X0N3|Q96MY1|A0A087WTU5|Q96MY1-2 Nucleolar protein 4-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21743.21743.3 21.84 18.6 1.127 12 1 1 0 1285.6078 3774.842 S130s TMT10 126 (K) TTPEsPPYSSGSYDSIKTEVSGCPEDLTVGR (A) T(0.0)T(0.0)PES(0.99)PPY(0.0)S(0.0)S(0.0)GS(0.0)Y(0.0)DS(0.0)IKT(0.0)EVS(0.0)GCPEDLT(0.0)VGR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NOL4L 47556.3 4 2 2856.1 68.02 HUMAN 1 -7.8718 -0.9657 GVLARKMSLGGGRPY-p O75385;S495-p GVLARKMSLGGGRPY 0.637234711093414 0.863314780611613 0.106333333333333 0.02 3.65022866464958 0.899971288692384 0.106333333333333 0.02 0.431496357091508 0.812835889823011 0.849650743648136 0.24857141121694 O75385 ULK1 O75385.S495.p_ULK1 O75385_S495s _1_1_495_495 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18353.18353.5 16.32 13.06 2.393 8 1 1 0 881.8458 4325.2324 S495s TMT10 493 (R) KMsLGGGRPYTPSPQVGTIPERPGWSGTPSPQGAEMR (G) KMS(0.99)LGGGRPY(0.0)T(0.0)PS(0.0)PQVGT(0.0)IPERPGWS(0.0)GT(0.0)PS(0.0)PQGAEMR K:TMT10,s:Phosphorylated S ULK1 113656.3 1 8 351.1 351.01 HUMAN 1 3.6502 0.9 GVLGGPATPASGPGP-p Q9NPF5;T409-p GVLGGPATPASGPGP 0.936677542728734 0.00651635621960572 -0.016 0.474 0.553028019593015 31.4348500628616 -0.016 0.474 0.880434795801405 0.000718645968702616 -0.157668226570415 6.86926092649306 Q9NPF5 DMAP1 Q9NPF5.T409.p_DMAP1 Q9NPF5_T409t _1_1_409_409 Q9NPF5 Q9NPF5 DNA methyltransferase 1-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31081.31081.5 22.94 20.31 1.102 7 1 1 0 1094.1868 5386.9465 T409t TMT10 401 (R) AGVLGGPAtPASGPGPASAEPAVTEPGLGPDPKDTIIDVVGAPLTPNSRK (R) AGVLGGPAT(0.99)PAS(0.0)GPGPAS(0.0)AEPAVT(0.0)EPGLGPDPKDT(0.0)IIDVVGAPLT(0.0)PNS(0.0)RK K:TMT10,t:Phosphorylated T DMAP1 53162.8 2 2 1615.1 127.51 HUMAN 1 -0.553 31.4349 GVLGPHASEPQLAPP-p O96013;S267-p GVLGPHASEPQLAPP 0.335984361418148 0.492874593970342 0.158 -0.073 8.83589527411412 4.1077983021124 0.158 -0.073 0.130740599660569 0.388347192460796 1.77995599087215 -0.937518105862648 O96013 PAK4 O96013.S267.p_PAK4 O96013_S267s _1_1_267_267 O96013 O96013|O96013-4|O96013-3 Serine/threonine-protein kinase PAK 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21854.21854.5 28.06 23.62 5.583 3 1 1 0 737.7755 3604.8896 S267s TMT10 255 (R) GAPSPGVLGPHAsEPQLAPPACTPAAPAVPGPPGPR (S) GAPS(0.0)PGVLGPHAS(0.99)EPQLAPPACT(0.0)PAAPAVPGPPGPR C:Carbamidomethylation,s:Phosphorylated S PAK4 64356.2 4 7 573.1 269.06 HUMAN 1 8.8359 -4.1078 GVLKKAASEELLEKS-p Q6ZV73;S515-p GVLKKAASEELLEKS 0.734788762117455 0.0418370804114387 -0.0573333333333333 -0.263666666666667 2.53404991130104 18.4737773717665 -0.0573333333333333 -0.263666666666667 0.557949649207997 0.0142109222322262 -0.62407258602545 -3.55578330859962 Q6ZV73 FGD6 Q6ZV73.S515.p_FGD6 Q6ZV73_S515s _1_1_515_515 Q6ZV73 Q6ZV73|Q6ZV73-2|F8VY01 FYVE, RhoGEF and PH domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16671.16671.2 14.09 7.43 99 1 1 1 0 764.4081 1447.8408 S515s TMT10 513 (K) AAsEELLEK (S) AAS(1.0)EELLEK K:TMT10,s:Phosphorylated S FGD6 162696.3 5 7 630.1 257.05 HUMAN 1 -2.534 -18.4738 GVLPSPATPRFSVPT-p Q71F56;T1043-p GVLPSPATPRFSVPT 0.770285483322094 0.0523129471927482 0.0786666666666666 0.328333333333333 2.17102313858484 17.0986697294249 0.0786666666666667 0.328333333333333 0.606593407617785 0.0195044194057111 0.546351848031759 3.27957682144413 Q71F56 MED13L Q71F56.T1043.p_MED13L Q71F56_T1043t_1_1_1043_1043 Q71F56 Q71F56 Mediator of RNA polymerase II transcription subunit 13-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30500.30500.4 22.53 22.53 0.551 12 1 1 0 1327.1377 5224.5694 N1025n T1043t TMT10 996 (R) DGYNNVPSVGSLADPDYLNTPQMNTPVTLnSAAPASNSGAGVLPSPAtPR (F) DGY(0.0)N(0.0)N(0.0)VPS(0.0)VGS(0.0)LADPDY(0.0)LN(0.33)T(0.0)PQMN(0.33)T(0.0)PVT(0.0)LN(0.33)S(0.0)AAPAS(0.0)N(0.0)S(0.0)GAGVLPS(0.0)PAT(0.99)PR n:Deamidated,t:Phosphorylated T MED13L 245507 2 14 415.1 321.44 HUMAN 1 2.171 17.0987 GVLSSQDSPHFQEKS-p P0CG31;S19-p GVLSSQDSPHFQEKS 0.487435592991974 0.00932239467837966 -0.101333333333333 -0.461666666666667 5.75203736175499 28.667680745658 -0.101333333333333 -0.461666666666667 0.265947715350814 0.00135903901778534 -1.24026235735528 -6.02778357084427 P0CG31 ZNF286B P0CG31.S19.p_ZNF286B P0CG31_S19s _1_1_19_19 P0CG31 P0CG31|I3L365 Putative zinc finger protein 286B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13235.13235.3 14.78 14.78 2.678 3 1 1 0 699.6862 2017.0755 S19s TMT10 12 (K) GVLSSQDsPHFQEK (S) GVLS(0.0)S(0.0)QDS(0.99)PHFQEK K:TMT10,s:Phosphorylated S ZNF286B 61168.3 1 22 394.7 330.8 HUMAN 1 -5.752 -28.6677 GVLVLRASFDERQPY-p P08069;S1339-p GVLVLRASFDERQPY 0.834327857608735 0.150178834993221 0.0506666666666667 0.177333333333333 1.51721591291384 10.8355303522835 0.0506666666666667 0.177333333333333 0.705144964154712 0.082498673349308 0.399017402724591 2.12637773217736 P08069 IGF1R P08069.S1339.p_IGF1R P08069_S1339s _1_1_1339_1339 P08069 P08069|C9J5X1 Insulin-like growth factor 1 receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21211.21211.3 12.34 8.63 99 1 1 1 0 765.0546 2213.1876 S1339s TMT10 1325 (K) AENGPGPGVLVLRAsFDER (Q) AENGPGPGVLVLRAS(1.0)FDER s:Phosphorylated S IGF1R 157300.7 3 4 2542.1 79.17 HUMAN 1 1.5172 10.8355 GVMFPGNSPSYTERS-p Q9NY27;S159-p GVMFPGNSPSYTERS 0.758950161718988 0.462719850454723 0.047 -0.0733333333333333 2.2947886526697 4.46198903866231 0.047 -0.0733333333333333 0.589550666568329 0.357932468964431 0.573138784494833 -1.00428675344601 Q9NY27 PPP4R2 Q9NY27.S159.p_PPP4R2 Q9NY27_S159s_1_1_159_159 Q9NY27 Q9NY27|Q9NY27-3|Q9NY27-2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17854.18062.3 21.94 21.94 2.733 4 1 1 0 704.643 2015.9516 M154m S159s TMT10 150 (R) MNGVmFPGNsPSYTER (S) M(0.0)NGVM(0.99)FPGNS(0.99)PS(0.0)Y(0.0)T(0.0)ER m:Oxidized methionine,s:Phosphorylated S PPP4R2 47296.6 29 2 1705.1 120.12 HUMAN 1 2.2948 -4.462 GVMTISDSPREQDSE-p Q14790-4;S228-p GVMTISDSPREQDSE 0.895223788322703 0.0446774715003744 -0.0383333333333333 0.316333333333333 0.941834380257189 18.0678163577471 -0.0383333333333333 0.316333333333333 0.805038335945487 0.0156033684644031 -0.25922387389201 3.4731461323076 Q14790 CASP8 Q14790.4.S228.p_CASP8 Q14790-4_S228s _1_1_228_228 Q14790-4 Q14790-4|Q14790-2|A0A0A0MS31|Q14790-8 Isoform 4 of Caspase-8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27011.27011.4 21.53 15.27 2.188 8 1 1 0 1230.0901 4837.3639 S228s TMT10 206 (K) IINDYEEFSKGEELCGVMTISDsPREQDSESQTLDK (V) IINDY(0.0)EEFS(0.0)KGEELCGVMT(0.0)IS(0.0)DS(0.99)PREQDS(0.0)ES(0.0)QT(0.0)LDK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CASP8 58555.8 1 1 5228.1 21.53 HUMAN 1 -0.9418 18.0678 GVMVSHRSGETEDTF-p P06733;S373-p GVMVSHRSGETEDTF 0.846398595977906 0.15805936754387 0.0616666666666667 0.540333333333333 1.40094180623421 10.5387178376128 0.0616666666666667 0.540333333333333 0.72427887672298 0.088334064952625 0.371632261348216 2.07458927076155 P06733 ENO1 P06733.S373.p_ENO1 P06733_S373s _1_1_373_373 P06733 P06733 Alpha-enolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37655.37655.3 28.91 25.6 2.212 4 1 1 0 964.491 2811.485 S373s TMT10 373 (R) sGETEDTFIADLVVGLCTGQIK (T) S(0.99)GET(0.0)EDT(0.0)FIADLVVGLCT(0.0)GQIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ENO1 47510.4 1 13 623.1 259.34 HUMAN 1 1.4009 10.5387 GVPAEGRTPPPFPGE-p Q9UJY1;T87-p GVPAEGRTPPPFPGE 0.660412515639265 0.258008625496504 0.0613333333333333 -0.115666666666667 3.37465187082953 7.75240613412613 0.0613333333333333 -0.115666666666667 0.459763841587163 0.167787416314485 0.795533116376654 -1.59168993494491 Q9UJY1 HSPB8 Q9UJY1.T87.p_HSPB8 Q9UJY1_T87t _1_1_87_87 Q9UJY1 Q9UJY1 Heat shock protein beta-8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25372.25576.3 15.99 10.42 99 1 1 1 0 868.7867 2524.3753 T87t TMT10 79 (R) FGVPAEGRtPPPFPGEPWK (V) FGVPAEGRT(1.0)PPPFPGEPWK K:TMT10,t:Phosphorylated T HSPB8 21775.1 6 3 3869.1 41.52 HUMAN 1 3.3747 -7.7524 GVPFFKQSPGHQSPL-p Q8N1G0;S266-p GVPFFKQSPGHQSPL 0.561383737409577 0.0192104793400816 -0.132333333333333 0.696333333333333 4.61473830564987 23.5899607796918 -0.132333333333333 0.696333333333334 0.345562151610348 0.00437526056354961 -1.0329587718788 4.68986715694857 Q8N1G0 ZNF687 Q8N1G0.S266.p_ZNF687 Q8N1G0_S266sS271s_2_2_266_271 Q8N1G0 Q8N1G0|Q8N1G0-2|F8WCX2 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26983.26983.5 19.33 19.33 2.544 6 2 2 0 827.0355 3971.1998 S266s S271s TMT10 245 (K) ATDIPASASPPPVAGVPFFKQsPGHQsPLASPK (V) AT(0.0)DIPAS(0.0)AS(0.0)PPPVAGVPFFKQS(0.99)PGHQS(0.99)PLAS(0.0)PK K:TMT10,s:Phosphorylated S ZNF687 131979.7 3 26 156.1 501.88 HUMAN 2 -4.6147 23.59 GVPNGEDSPPQVPLP-p O15156;S180-p GVPNGEDSPPQVPLP 0.525661031242721 0.339723383973487 0.086 0.139666666666667 5.16538505367296 6.21107239329069 0.086 0.139666666666667 0.304411808081098 0.239272485345511 1.13428120552669 1.32175369125006 O15156 ZBTB7B O15156.S180.p_ZBTB7B O15156_S180s_1_1_180_180 O15156 O15156|O15156-2 Zinc finger and BTB domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29285.29490.5 31.55 27.06 1.638 5 1 1 0 865.8425 4244.2342 N176n S180s TMT10 161 (R) QYLEAFATATASGVPnGEDsPPQVPLPPPPPPPPRPVAR (R) QY(0.0)LEAFAT(0.0)AT(0.0)AS(0.0)GVPN(1.0)GEDS(0.99)PPQVPLPPPPPPPPRPVAR n:Deamidated,s:Phosphorylated S ZBTB7B 58938.8 29 3 701.1 240.09 HUMAN 1 5.1654 6.2111 GVPVKPMTPKVVTLW-p Q15131;T196-p GVPVKPMTPKVVTLW 0.660414873314641 0.0346747881525911 -0.121666666666667 0.282333333333333 3.37253186135227 19.6658810217886 -0.121666666666667 0.282333333333333 0.459988330196096 0.0107997051285527 -0.795113244802829 3.8041249072021 Q15131 CDK10 Q15131.T196.p_CDK10 Q15131_T196t _1_1_196_196 Q15131 Q15131|F8W872|Q15131-2|Q15131-3|Q15131-4 Cyclin-dependent kinase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17119.17119.3 14.91 14.91 12.02 2 1 1 0 685.7275 1975.2018 T196t TMT10 187 (R) AYGVPVKPMtPK (V) AY(0.0)GVPVKPMT(0.99)PK K:TMT10,t:Phosphorylated T CDK10 41607.9 9 1 5974.1 14.91 HUMAN 1 -3.3725 19.6659 GVPVRTYTHEVVTLW-p G3V5T9;T160-p GVPVRTYTHEVVTLW 0.58471981560589 0.00685566093054045 -0.103333333333333 -0.521333333333333 4.28635687556436 31.0424960133829 -0.103333333333333 -0.521333333333333 0.372704221971087 0.000786593582150736 -0.971486307719457 -6.74450104163529 G3V5T9 CDK2 G3V5T9.T160.p_CDK2 G3V5T9_T160t _1_1_160_160 G3V5T9 G3V5T9|Q00526|P24941 Cyclin-dependent kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.21260.21439.3 19.93 18.74 2.213 5 1 1 0 626.3112 1796.9533 T160t TMT10 158 (R) TYtHEVVTLWYR (A) T(0.0)Y(0.0)T(0.99)HEVVT(0.0)LWY(0.0)R t:Phosphorylated T CDK2 39577.1 9 2 1934.3 106.29 HUMAN 1 -4.2864 -31.0425 GVQDLFNSSKADLSG-p P30740;S299-p GVQDLFNSSKADLSG 0.296322613481062 0.211771146947193 0.251333333333333 0.181666666666667 9.94840686528448 8.86931595965433 0.251333333333333 0.181666666666667 0.101195060287911 0.129738360073645 1.97274833362158 1.78510907373455 P30740 SERPINB1 P30740.S299.p_SERPINB1 P30740_S299s_1_1_299_299 P30740 P30740|P30740-2 Leukocyte elastase inhibitor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27834.27834.5 7.28 2.9 1.369 6 1 1 0 602.707 2928.5152 N285n S299s Hydrogen 278 (K) LEESYTLnSDLARLGVQDLFNsSK (A) LEES(0.0)Y(0.0)T(0.0)LN(0.99)S(0.0)DLARLGVQDLFN(0.0)S(0.99)S(0.0)K K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S SERPINB1 42855.1 1 1 6041.1 14.46 HUMAN 1 9.9484 8.8693 GVQPAWGSAEAVDID-p Q10713;S280-p GVQPAWGSAEAVDID 0.429324322799591 0.584907363196638 -0.142333333333333 0.056 6.76122414464162 3.14577348807416 -0.142333333333333 0.056 0.21080338752643 0.484643788807069 -1.41914856162476 0.749759957315666 Q10713 PMPCA Q10713.S280.p_PMPCA Q10713_S280s _1_1_280_280 Q10713 Q10713|Q10713-2 Mitochondrial-processing peptidase subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30493.30493.3 15.49 15.49 15.492 2 1 1 0 790.3969 2289.2077 S280s TMT10 270 (K) YLLGVQPAWGsAEAVDIDR (S) Y(0.0)LLGVQPAWGS(0.99)AEAVDIDR s:Phosphorylated S PMPCA 58765.4 1 2 3043.1 62.28 HUMAN 1 -6.7612 3.1458 GVQPLPGSPTADRQS-p Q9H5J0;S549-p GVQPLPGSPTADRQS 0.537704130557524 0.360376815650301 0.099 0.113333333333333 4.98172339884846 5.88147516541145 0.099 0.113333333333333 0.317561365055049 0.258138322484206 1.10070774409649 1.26312552161055 Q9H5J0 ZBTB3 Q9H5J0.S549.p_ZBTB3 Q9H5J0_S549s _1_1_549_549 Q9H5J0 Q9H5J0 Zinc finger and BTB domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21372.21372.5 23.31 23.31 1.58 6 1 1 0 816.2429 3997.1962 S549s TMT10 531 (R) SKPDPEVGPLLGVQPLPGsPTADRQSSSGGGPPK (D) S(0.0)KPDPEVGPLLGVQPLPGS(0.99)PT(0.0)ADRQS(0.0)S(0.0)S(0.0)GGGPPK K:TMT10,s:Phosphorylated S ZBTB3 62396.7 7 5 1838.1 111.83 HUMAN 1 4.9817 5.8815 GVQSLNWTKIMKTIV-p Q9Y5B9;T903-p GVQSLNWTKIMKTIV 0.248443979884971 0.0198070948003416 -0.351666666666667 0.502333333333333 11.5530852981797 23.369998520672 -0.351666666666667 0.502333333333334 0.0699344993499353 0.00460256730357599 -2.25330581561182 4.63714158831285 Q9Y5B9 SUPT16H Q9Y5B9.T903.p_SUPT16H Q9Y5B9_T903t _1_1_903_903 Q9Y5B9 Q9Y5B9 FACT complex subunit SPT16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21299.21299.3 13.25 12.75 3.89 4 1 1 0 655.3369 1884.0267 T903t TMT10 893 (K) YTEGVQSLNWtK (I) Y(0.0)T(0.0)EGVQS(0.0)LNWT(0.99)K K:TMT10,t:Phosphorylated T SUPT16H 120482.1 2 5 1519.1 134.4 HUMAN 1 -11.5531 23.37 GVQSVMGSRLGQMVL-p O60664;S179-p GVQSVMGSRLGQMVL 0.836372411785846 0.484261297116107 0.0293333333333333 -0.072 1.49925819888374 4.20465204473026 0.0293333333333333 -0.072 0.708066716113036 0.379782365787095 0.394813901063617 -0.955884364852408 O60664 PLIN3 O60664.S179.p_PLIN3 O60664_S179s _1_1_179_179 O60664 O60664 Perilipin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16321.16321.2 10.49 10.49 1.101 4 1 1 0 836.9192 1592.8628 S179s TMT10 167 (K) SVVTGGVQSVMGsR (L) S(0.0)VVT(0.0)GGVQS(0.0)VMGS(0.99)R s:Phosphorylated S PLIN3 47245.3 1 6 1075.1 180.54 HUMAN 1 1.4993 -4.2047 GVRDRRDSGVGASLT-p Q9Y3M8;S572-p GVRDRRDSGVGASLT 0.425033318045053 0.174758347452007 -0.179666666666667 0.251666666666667 6.84589581285247 9.96377894215641 -0.179666666666667 0.251666666666667 0.206733291221231 0.100837508320033 -1.4340102033818 1.97462303054657 Q9Y3M8 STARD13 Q9Y3M8.S572.p_STARD13 Q9Y3M8_S572s _1_1_572_572 Q9Y3M8 Q9Y3M8|Q9Y3M8-2|Q9Y3M8-4|Q9Y3M8-3|Q9Y3M8-5 StAR-related lipid transfer protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.3511.3511.5 9.8 9.8 9.801 3 1 1 0 445.2349 2142.1802 S572s TMT10 568 (R) DRRDsGVGASLTRPNRR (L) DRRDS(0.99)GVGAS(0.0)LT(0.0)RPNRR s:Phosphorylated S STARD13 126277.4 3 10 564.1 271.22 HUMAN 1 -6.8459 9.9638 GVREEQRSPFNDRFP-p O94913;S705-p GVREEQRSPFNDRFP 0.566006108525713 0.36368266658254 -0.087 0.107666666666667 4.55219958077628 5.82397800322585 -0.087 0.107666666666667 0.350574272861403 0.261578593149592 -1.02131727480004 1.25285262667659 O94913 PCF11 O94913.S705.p_PCF11 O94913_S705s _1_1_705_705 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15522.15522.4 17.53 17.53 99 1 1 1 0 576.0506 2221.213 S705s TMT10 701 (R) EEQRsPFNDRFPLK (R) EEQRS(1.0)PFNDRFPLK K:TMT10,s:Phosphorylated S PCF11 173731.7 8 11 508.1 288.88 HUMAN 1 -4.5522 5.824 GVRKRSYSAGNASQL-p Q14678;S325-p GVRKRSYSAGNASQL 0.0881586637451288 0.00604775327324358 -0.392666666666667 -0.534333333333333 22.4828629670398 32.0231496277194 -0.392666666666667 -0.534333333333333 0.00564564678361157 0.000627603038065158 -4.43322985527672 -7.05988635765424 Q14678 KANK1 Q14678.S325.p_KANK1 Q14678_S325s _1_1_325_325 Q14678 Q14678|Q14678-2 KN motif and ankyrin repeat domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15726.15726.2 15.98 10.64 1.887 5 1 1 0 960.4571 1839.9398 S325s TMT10 323 (R) SYsAGNASQLEQLSR (A) S(0.0)Y(0.0)S(0.99)AGNAS(0.0)QLEQLS(0.0)R s:Phosphorylated S KANK1 149112.3 4 2 2363.1 86.5 HUMAN 1 -22.4829 -32.0231 GVRLRRPSVNGEPGS-p Q8N3D4;S1257-p GVRLRRPSVNGEPGS 0.770398746656441 0.263752336593741 -0.0463333333333333 -0.109333333333333 2.17002560448082 7.62531373812088 -0.0463333333333333 -0.109333333333333 0.606732752494261 0.172770116536076 -0.546134662769277 -1.56961348161257 Q8N3D4 EHBP1L1 Q8N3D4.S1257.p_EHBP1L1 Q8N3D4_S1257s_1_1_1257_1257 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5666.5871.3 13.01 8.11 4.29 2 1 1 0 542.9268 1545.8132 S1257s N1259n Hydrogen 1255 (R) RPsVnGEPGSVPPPR (A) RPS(0.99)VN(1.0)GEPGS(0.0)VPPPR s:Phosphorylated S,n:Deamidated EHBP1L1 162650.3 6 13 593.1 264.13 HUMAN 1 -2.17 -7.6253 GVRRKRVSPVPFQSG-p Q13233;S275-p GVRRKRVSPVPFQSG 0.648280093880884 0.287469928434739 -0.0776666666666667 -0.102666666666667 3.52650170995092 7.14317172708935 -0.0776666666666667 -0.102666666666667 0.443966119552746 0.19305578825138 -0.825464050491683 -1.48563323382347 Q13233 MAP3K1 Q13233.S275.p_MAP3K1 Q13233_S275s _1_1_275_275 Q13233 Q13233 Mitogen-activated protein kinase kinase kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10583.10583.3 11.7 11.7 11.701 2 1 1 0 513.6059 1458.8379 S275s TMT10 273 (K) RVsPVPFQSGR (I) RVS(0.99)PVPFQS(0.0)GR s:Phosphorylated S MAP3K1 166521 9 6 505.1 289.91 HUMAN 1 -3.5265 -7.1432 GVRVSPKSPPTDQKK-p Q9BY89;S1366-p GVRVSPKSPPTDQKK 0.735186751544101 0.124684577081863 -0.057 -0.200666666666667 2.53010405807081 11.9257419843218 -0.057 -0.200666666666667 0.558456813808154 0.0641838555175829 -0.623241209329567 -2.31802200659266 Q9BY89 KIAA1671 Q9BY89.S1366.p_KIAA1671 Q9BY89_S1366s _1_1_1366_1366 Q9BY89 Q9BY89 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9777.9982.3 13.05 13.05 1.465 3 1 1 0 651.0336 1871.1205 S1366s TMT10 1362 (R) VSPKsPPTDQK (K) VS(0.0)PKS(0.99)PPT(0.0)DQK K:TMT10,s:Phosphorylated S KIAA1671 197734.4 6 20 105.1 590.35 HUMAN 1 -2.5301 -11.9257 GVSNRGVSEKQLTSN-p O94916-5;S138-p GVSNRGVSEKQLTSN 0.971185861810661 0.212498073303696 -0.0113333333333333 0.197333333333333 0.248474352799022 8.84912681856601 -0.0113333333333334 0.197333333333333 0.944392576758211 0.130342881619009 -0.073047375103991 1.78161717446274 O94916 NFAT5 O94916.5.S138.p_NFAT5 O94916-5_S138s _1_1_138_138 O94916-5 O94916-5|O94916-4|O94916-2 Isoform E of Nuclear factor of activated T-cells 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24078.24078.5 7.79 2.71 3.228 6 1 1 0 587.5292 2853.6037 S138s TMT10 136 (R) GVsEKQLTSNTVQQHPSTPK (R) GVS(0.99)EKQLT(0.0)S(0.0)NT(0.0)VQQHPS(0.0)T(0.0)PK K:TMT10,s:Phosphorylated S NFAT5 168774.8 2 1 1405.1 146.06 HUMAN 1 -0.2485 8.8491 GVSPWGDSPIDFEDS-p Q13085;S488-p GVSPWGDSPIDFEDS 0.401454832845887 0.626249390203376 0.114666666666667 0.0563333333333334 7.31661265701515 2.76555543181944 0.114666666666667 0.0563333333333334 0.185497787630597 0.528986339284737 1.51632865601866 0.67228775747346 Q13085 ACACA Q13085.S488.p_ACACA Q13085_S488s _1_1_488_488 Q13085 Q13085-4|Q13085-2|Q13085-3 Acetyl-CoA carboxylase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27989.27989.3 21.76 21.76 3.672 4 1 1 0 1053.7905 3079.395 S488s TMT10 478 (R) MMYGVSPWGDsPIDFEDSAHVPCPR (G) MMY(0.0)GVS(0.0)PWGDS(0.99)PIDFEDS(0.0)AHVPCPR C:Carbamidomethylation,s:Phosphorylated S ACACA 267260.7 1 6 860.1 210.55 HUMAN 1 7.3166 2.7656 GVTERMPTPVIKAFG-p P07954-2;T47-p GVTERMPTPVIKAFG 0.37550402812562 0.157463630941297 0.144333333333333 0.224 7.86553401141221 10.5586764829259 0.144333333333333 0.224 0.163473213101038 0.0879290440705114 1.61182539323348 2.07806741139149 P07954 FH P07954.2.T47.p_FH P07954-2_T47t _1_1_47_47 P07954-2 P07954|P07954-2 Isoform Cytoplasmic of Fumarate hydratase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20218.20218.3 12.21 7.61 3.999 2 1 1 0 679.3841 1956.1716 T47t TMT10 38 (K) IGGVTERMPtPVIK (A) IGGVT(0.0)ERMPT(0.99)PVIK K:TMT10,t:Phosphorylated T FH 50383 3 2 2660.1 74.84 HUMAN 1 7.8655 10.5587 GVTSTSDSEEEGDDQ-p O75475;S275-p GVTSTSDSEEEGDDQ 0.540716629644627 0.00479967872381982 0.081 0.541333333333333 4.92797967257485 33.8788729743128 0.081 0.541333333333333 0.321515587353585 0.000409366879622082 1.09084331936184 7.69046757027094 O75475 PSIP1 O75475.S275.p_PSIP1 O75475_S275s _1_1_275_275 O75475 O75475|O75475-2|O75475-3 PC4 and SFRS1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8559.8559.3 20.62 20.62 2.293 6 1 1 0 880.0494 2558.163 S275s TMT10 267 (K) TGVTSTSDsEEEGDDQEGEK (K) T(0.0)GVT(0.0)S(0.0)T(0.0)S(0.0)DS(0.99)EEEGDDQEGEK K:TMT10,s:Phosphorylated S PSIP1 60216.3 4 10 382.1 334.17 HUMAN 1 4.928 33.8789 GVTVKTKSLEPIDAL-p Q4KWH8;S1535-p GVTVKTKSLEPIDAL 0.839353804661943 0.24725482977788 -0.0293333333333333 -0.113666666666667 1.46979966961889 7.99591041322445 -0.0293333333333333 -0.113666666666667 0.712885913209051 0.158638632930441 -0.387898028283842 -1.63393355115406 Q4KWH8 PLCH1 Q4KWH8.S1535.p_PLCH1 Q4KWH8_S1535s _1_1_1535_1535 Q4KWH8 Q4KWH8|Q4KWH8-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28355.28355.4 16.8 11.89 13.745 2 1 1 0 538.5518 2071.2163 S1535s TMT10 1535 (K) sLEPIDALTEQLRK (L) S(0.99)LEPIDALT(0.0)EQLRK K:TMT10,s:Phosphorylated S PLCH1 191330.6 6 17 201.1 451.38 HUMAN 1 -1.4698 -7.9959 GVVANAPSPPESSSL-p Q8ND24;S15-p GVVANAPSPPESSSL 0.409152196973989 0.990382172044969 0.151 -0.00133333333333332 7.15428502718425 0.0615355238107766 0.151 -0.00133333333333331 0.192562403172427 0.98593083097456 1.48799388825829 -0.0184617400960359 Q8ND24 RNF214 Q8ND24.S15.p_RNF214 Q8ND24_S15s _1_1_15_15 Q8ND24 Q8ND24|Q8ND24-2|E9PN76 RING finger protein 214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26058.26058.4 22.29 22.29 5.149 9 1 1 0 1042.2625 4086.0589 S15s Acetyl 2 (M) AASEVAGVVANAPsPPESSSLCASKSDEGLPDGLSTK (D) AAS(0.0)EVAGVVANAPS(0.99)PPES(0.0)S(0.0)S(0.0)LCAS(0.0)KS(0.0)DEGLPDGLS(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RNF214 78407.7 5 1 887.1 205.7 HUMAN 1 7.1543 -0.0615 GVVFRDISPVLKDPA-p P07741;S30-p GVVFRDISPVLKDPA 0.327040541936924 0.00479967872381982 -0.147333333333333 -0.558666666666667 9.08341687829943 33.8713458007408 -0.147333333333333 -0.558666666666667 0.123497541531191 0.00041007700778235 -1.8228038530135 -7.68781651575697 P07741 APRT P07741.S30.p_APRT P07741_S30s _1_1_30_30 P07741 P07741|H3BQZ9|P07741-2|H3BSW3 Adenine phosphoribosyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.34347.34347.3 12.08 12.08 2.485 3 1 1 0 919.5001 2676.5165 S30s TMT10 15 (R) SFPDFPTPGVVFRDIsPVLK (D) S(0.0)FPDFPT(0.0)PGVVFRDIS(0.99)PVLK K:TMT10,s:Phosphorylated S APRT 19778.6 4 3 1901.1 108.33 HUMAN 1 -9.0834 -33.8713 GVVPVSASPSSVEVH-p Q7Z739;S385-p GVVPVSASPSSVEVH 0.953405971129685 0.0731897017121012 -0.00933333333333334 -0.203 0.408429137741344 15.0811153623404 -0.00933333333333334 -0.203 0.910242451797582 0.031037623723264 -0.11810807897544 -2.89177877975648 Q7Z739 YTHDF3 Q7Z739.S385.p_YTHDF3 Q7Z739_S385s_1_1_385_385 Q7Z739 A0A087WY31|Q7Z739|A0A087X0Q1|A0A024R7W5 YTH domain-containing family protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28671.28671.5 26.42 25.34 1.227 5 1 1 0 839.2231 4110.1296 N368n N374n S385s TMT10 361 (R) GAGFNQNnGAGSEnFGLGVVPVSAsPSSVEVHPVLEK (L) GAGFN(0.0)QN(0.0)N(0.99)GAGS(0.0)EN(0.99)FGLGVVPVS(0.0)AS(0.99)PS(0.0)S(0.0)VEVHPVLEK K:TMT10,n:Deamidated,s:Phosphorylated S YTHDF3 63974.2 14 7 1868.1 109.97 HUMAN 1 -0.4084 -15.0811 GVVSESDSPVKRPGR-p P18858;S51-p GVVSESDSPVKRPGR 0.142384306016613 0.00165401543705715 -0.286666666666667 -1.106 17.2919976143799 44.2228480493188 -0.286666666666667 -1.106 0.0186552141384861 3.78194488124521e-05 -3.32036933443372 -12.2041423046164 P18858 LIG1 P18858.S51.p_LIG1 P18858_S51s _1_1_51_51 P18858 P18858|P18858-3|F5GZ28|P18858-2|M0R0Q7|B4E135 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12551.12551.3 11.04 11.04 1.894 3 1 1 0 846.4401 2457.325 S51s TMT10 41 (K) EWNGVVSESDsPVKRPGR (K) EWNGVVS(0.0)ES(0.0)DS(0.99)PVKRPGR K:TMT10,s:Phosphorylated S LIG1 102361.8 6 3 302.1 376.44 HUMAN 1 -17.292 -44.2228 GVVTPAASPSLPQPG-p J3KNL6;S201-p GVVTPAASPSLPQPG 0.403159221089301 0.558376301638306 0.172333333333333 0.0786666666666667 7.2827221444177 3.41207780738266 0.172333333333333 0.0786666666666667 0.18695099699647 0.455818785103406 1.51041710504848 0.802814305710038 J3KNL6 SEC16A J3KNL6.S201.p_SEC16A J3KNL6_S201s _1_1_201_201 J3KNL6 O15027-3|O15027-4|O15027-2|J3KNL6|F1T0I1|O15027-5 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21831.21831.4 27.97 24.07 1.134 4 1 1 0 1126.0518 4421.2159 S201s TMT10 189 (R) QNPHDGVVTPAAsPSLPQPGLQMPGQWGPVQGGPQPSGQHR (S) Q(0.0)N(0.0)PHDGVVT(0.0)PAAS(0.99)PS(0.0)LPQPGLQM(0.0)PGQWGPVQGGPQPS(0.0)GQHR s:Phosphorylated S SEC16A 253486.5 6 7 15.1 1143.82 HUMAN 1 7.2827 3.4121 GVWAERDSDDERPSF-p Q9UBB9;S59-p GVWAERDSDDERPSF 0.184744214874467 0.605433402736029 0.291666666666667 -0.0763333333333333 14.4249097940836 2.9575423983917 0.291666666666667 -0.0763333333333333 0.0361001511755367 0.506110980929653 2.77127218613106 -0.711676332305836 Q9UBB9 TFIP11 Q9UBB9.S59.p_TFIP11 Q9UBB9_S59s _1_1_59_59 Q9UBB9 Q9UBB9 Tuftelin-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16883.16883.4 20 11.9 4.123 4 1 1 0 785.6162 3059.4747 S59s TMT10 47 (K) EEATYGVWAERDsDDERPSFGGK (R) EEAT(0.0)Y(0.0)GVWAERDS(0.99)DDERPS(0.0)FGGK K:TMT10,s:Phosphorylated S TFIP11 97217.4 7 2 1343.1 151.47 HUMAN 1 14.4249 -2.9575 GVYAFEYYPSTPGRY-p O75369-8;Y516-p GVYAFEYYPSTPGRY 0.643897177514816 0.0450881171308284 -0.0813333333333333 0.258333333333333 3.57509633634462 18.0121731096189 -0.0813333333333334 0.258333333333333 0.439026126939875 0.015804570170708 -0.834984470586066 3.46189273101182 O75369 FLNB O75369.8.Y516.p_FLNB O75369-8_Y516y _1_1_516_516 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|O75369-4 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.33161.33161.2 17.37 17.37 1.1 5 1 1 0 1203.5476 2326.1229 Y516y TMT10 505 (K) DFLDGVYAFEYyPSTPGR (Y) DFLDGVY(0.0)AFEY(0.0)Y(0.99)PS(0.0)T(0.0)PGR y:Phosphorylated Y FLNB 283797.6 2 7 67.1 680.07 HUMAN 1 -3.5751 18.0122 GVYEISLSPTGVSRV-p Q96Q83;S83-p GVYEISLSPTGVSRV 0.95578545369103 0.0980251176247104 -0.00833333333333335 -0.187666666666667 0.384297633255144 13.3344691998467 -0.00833333333333335 -0.187666666666667 0.915314277355049 0.0464037501760823 -0.111400532952087 -2.57006110086409 Q96Q83 ALKBH3 Q96Q83.S83.p_ALKBH3 Q96Q83_S83s _1_1_83_83 Q96Q83 Q96Q83|E9PN35 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21682.21682.3 12.59 12.59 1.329 5 1 1 0 796.0779 2306.2553 S83s TMT10 71 (R) VIDREGVYEISLsPTGVSR (V) VIDREGVY(0.0)EIS(0.0)LS(0.99)PT(0.0)GVS(0.0)R s:Phosphorylated S ALKBH3 33602.3 1 1 5712.1 16.95 HUMAN 1 -0.3843 -13.3345 GWAAAAPSPGSARSM-p Q9H3Q1;S292-p GWAAAAPSPGSARSM 0.801789763948685 0.60702286543901 0.042 0.049 1.84722685479357 2.94356196762652 0.042 0.049 0.653547735994298 0.507742834593977 0.474697081409629 0.708827183588561 Q9H3Q1 CDC42EP4 Q9H3Q1.S292.p_CDC42EP4 Q9H3Q1_S292s _1_1_292_292 Q9H3Q1 Q9H3Q1|Q9H3Q1-2 Cdc42 effector protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24533.24533.3 28.16 28.16 1.907 4 1 1 0 1046.1687 3056.5275 S292s TMT10 269 (K) AGPDLPSLPSHALEDEGWAAAAPsPGSAR (S) AGPDLPS(0.0)LPS(0.0)HALEDEGWAAAAPS(0.99)PGS(0.0)AR s:Phosphorylated S CDC42EP4 38036.3 6 11 635.1 256.47 HUMAN 1 1.8472 2.9436 GWAFGSNSLPIAGSV-p Q5PRF9;S557-p GWAFGSNSLPIAGSV 0.633204865850603 0.0626966771883242 0.0746666666666667 0.230666666666667 3.69569837222252 16.0112947117216 0.0746666666666667 0.230666666666667 0.427002249333175 0.0250536224712759 0.858495992028782 3.06818941929821 Q5PRF9 SAMD4B Q5PRF9.S557.p_SAMD4B Q5PRF9_S557s _1_1_557_557 Q5PRF9 Q5PRF9|M0QZ22|A0A087WZT0 Protein Smaug homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30844.30844.3 18.57 18.57 1.179 3 1 1 0 781.7216 2263.1855 S557s TMT10 550 (K) GWAFGSNsLPIAGSVGMGVAR (R) GWAFGS(0.0)NS(0.99)LPIAGS(0.0)VGMGVAR s:Phosphorylated S SAMD4B 75938.6 5 6 1599.1 128.75 HUMAN 1 3.6957 16.0113 GWAFLPESPHTRRRE-p B7Z1M9;S97-p GWAFLPESPHTRRRE 0.791417276987856 0.242304556177019 -0.071 -0.126666666666667 1.96184331832572 8.11073096032347 -0.071 -0.126666666666667 0.636525296940006 0.154499437990544 -0.500335290565288 -1.6538323154663 B7Z1M9 C2CD4D B7Z1M9.S97.p_C2CD4D B7Z1M9_S97s _1_1_97_97 B7Z1M9 B7Z1M9 C2 calcium-dependent domain-containing protein 4D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20411.20411.3 14.96 14.96 2.35 2 1 1 0 612.6289 1755.9016 S97s TMT10 89 (R) EGWAFLPEsPHTR (R) EGWAFLPES(0.99)PHT(0.0)R s:Phosphorylated S C2CD4D 38096 1 2 3907.1 40.97 HUMAN 1 -1.9618 -8.1107 GWAPPGPSPSSGALD-p A6NHB5;S51-p GWAPPGPSPSSGALD 0.116068665005162 0.00609801306239028 -0.470333333333333 0.597333333333333 19.4723041918292 31.9483919715211 -0.470333333333333 0.597333333333333 0.0112919664939276 0.000638499854815438 -3.76660520816114 7.0354225072755 A6NHB5 NotFound A6NHB5.S51.p_NotFound A6NHB5_S51s _1_1_51_51 A6NHB5 A6NHB5|Q14202|Q14202-2|A6NHN7|A6NL54|Q14202-3|A6NC58 Zinc finger MYM-type protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.33503.33503.2 18.05 15.33 1.133 4 1 1 0 1486.2637 2891.5555 S51s TMT10 44 (R) GWAPPGPsPSSGALDLLDTPAGLEK (D) GWAPPGPS(0.99)PS(0.0)S(0.0)GALDLLDT(0.0)PAGLEK K:TMT10,s:Phosphorylated S ZMYM3 156426.3 8 4 331.1 357.99 HUMAN 1 -19.4723 31.9484 GWDSPPASPLQRQPS-p Q13424;S193-p GWDSPPASPLQRQPS 0.560135693219576 0.61497197853983 0.168666666666667 -0.079 4.64074418871204 2.86851616256182 0.168666666666667 -0.079 0.343499082302169 0.516592841434369 1.03779108087356 -0.693482623971426 Q13424 SNTA1 Q13424.S193.p_SNTA1 Q13424_S193s _1_1_193_193 Q13424 Q13424 Alpha-1-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15907.15907.3 11.94 11.94 3.392 6 1 1 0 775.0367 2243.1254 S193s TMT10 178 (K) NSTGGTSVGWDSPPAsPLQR (Q) NS(0.0)T(0.0)GGT(0.0)S(0.0)VGWDS(0.0)PPAS(0.99)PLQR s:Phosphorylated S SNTA1 54236.6 1 2 4013.1 39.08 HUMAN 1 4.6407 -2.8685 GWEDCKRSPAWNETG-p Q9UPQ9;S803-p GWEDCKRSPAWNETG 0.0719549135296335 0.00354425123931495 -0.380666666666667 -0.602333333333333 24.6538960740051 36.5667483747293 -0.380666666666667 -0.602333333333333 0.00342460426015901 0.000220457644339615 -4.95665000711756 -8.68927847645683 Q9UPQ9 TNRC6B Q9UPQ9.S803.p_TNRC6B Q9UPQ9_S803s _1_1_803_803 Q9UPQ9 Q9UPQ9|Q9UPQ9-1 Trinucleotide repeat-containing gene 6B protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10920.10920.4 12.35 12.35 2.979 2 1 1 0 636.8012 2464.2192 S803s TMT10 795 (K) GGWEDCKRsPAWNETGR (Q) GGWEDCKRS(0.99)PAWNET(0.0)GR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNRC6B 194854.6 2 6 865.1 210.19 HUMAN 1 -24.6539 -36.5667 GWERTEGTPPPPGQP-p J3KPF0;T2500-p GWERTEGTPPPPGQP 0.706604154820368 0.0497778839744647 0.0563333333333333 0.257666666666667 2.83316041428578 17.4228722595369 0.0563333333333333 0.257666666666667 0.520815569282197 0.01810142536805 0.686316676157132 3.34376530567916 J3KPF0 NotFound J3KPF0.T2500.p_NotFound J3KPF0_T2500t _1_1_2500_2500 J3KPF0 J3KPF0|F8VWT9|Q9Y4D8|Q9Y4D8-4 Probable E3 ubiquitin-protein ligase HECTD4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6238.6238.2 17.72 17.72 1.52 2 1 1 0 793.3965 1505.8161 T2500t Hydrogen 2497 (R) TEGtPPPPGQPAK (G) T(0.0)EGT(0.99)PPPPGQPAK K:TMT10-Lys-Only,t:Phosphorylated T HECTD4 490564.1 7 11 927.1 199.75 HUMAN 1 2.8332 17.4229 GWESYYKTEGDEEAE-p P12956;T10-p GWESYYKTEGDEEAE 0.513320713565578 0.00599697905125109 -0.127333333333333 0.943333333333333 5.3507761791138 32.0912483106129 -0.127333333333333 0.943333333333334 0.291690565265127 0.000617838786652711 -1.1679688592977 7.08223263855332 P12956 XRCC6 P12956.T10.p_XRCC6 P12956_T10t _1_1_10_10 P12956 P12956|P12956-2 X-ray repair cross-complementing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23289.23289.4 15.84 15.84 1.118 7 1 1 0 1021.1892 4001.7613 T10t Acetyl 2 (M) SGWESYYKtEGDEEAEEEQEENLEASGDYK (Y) S(0.0)GWES(0.0)Y(0.0)Y(0.0)KT(0.99)EGDEEAEEEQEENLEAS(0.0)GDY(0.0)K K:TMT10,t:Phosphorylated T XRCC6 70127.1 1 3 815.1 220.5 HUMAN 1 -5.3508 32.0912 GWGPPWDSAEEEEED-p Q9UBC1;S150-p GWGPPWDSAEEEEED 0.742163837330897 0.0585949431240587 -0.0563333333333334 0.236666666666667 2.45968248462159 16.4099694334884 -0.0563333333333334 0.236666666666667 0.567586100462073 0.0228561488993218 -0.608356238687266 3.14501665079508 Q9UBC1 NFKBIL1 Q9UBC1.S150.p_NFKBIL1 Q9UBC1_S150s _1_1_150_150 Q9UBC1 Q9UBC1|Q9UBC1-3|A0A0A0MRT5|Q9UBC1-2|Q5STV6 NF-kappa-B inhibitor-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26437.26437.3 27.84 27.84 8.246 3 1 1 0 1351.9702 3973.9183 S150s TMT10 132 (K) NKDGETPGQILGWGPPWDsAEEEEEDDASK (E) NKDGET(0.0)PGQILGWGPPWDS(0.99)AEEEEEDDAS(0.0)K K:TMT10,s:Phosphorylated S NFKBIL1 43602.6 6 2 3147.1 59.19 HUMAN 1 -2.4597 16.41 GWKGMSVSDLADKLS-p Q16891-2;S379-p GWKGMSVSDLADKLS 0.134264480831341 0.76449312169343 0.450666666666667 -0.039 17.9142709861967 1.61082540738901 0.450666666666667 -0.039 0.0161648954990688 0.690108631347629 3.44493615520904 -0.420735555539204 Q16891 IMMT Q16891.2.S379.p_IMMT Q16891-2_S379s _1_1_379_379 Q16891-2 Q16891|Q16891-4|Q16891-2|Q16891-3|B9A067|C9J406 Isoform 2 of MICOS complex subunit MIC60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29518.29518.5 25.61 25.61 1.372 5 1 1 0 641.7277 3124.6461 S379s TMT10 375 (K) GMSVsDLADKLSTDDLNSLIAHAHR (R) GMS(0.0)VS(0.99)DLADKLS(0.0)T(0.0)DDLNS(0.0)LIAHAHR K:TMT10,s:Phosphorylated S IMMT 83022.6 1 10 1057.1 182.65 HUMAN 1 17.9143 -1.6108 GWMRNNLSLGDALAK-p Q96AD5;S428-p GWMRNNLSLGDALAK 0.254904931587033 0.0220642689874756 0.365333333333333 0.438333333333333 11.2949842824639 22.6274821552951 0.365333333333333 0.438333333333333 0.074216688370754 0.00546074358768644 2.20787100615995 4.46201961660478 Q96AD5 PNPLA2 Q96AD5.S428.p_PNPLA2 Q96AD5_S428s _1_1_428_428 Q96AD5 Q96AD5|Q96AD5-2 Patatin-like phospholipase domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27420.27420.3 12.49 6.87 99 1 1 1 0 848.0875 2462.2862 S428s TMT10 425 (R) NNLsLGDALAKWEECQR (Q) NNLS(1.0)LGDALAKWEECQR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PNPLA2 55999.6 2 2 3262.1 55.62 HUMAN 1 11.295 22.6275 GWNTVPISKGSRPID-p Q04637-9;S1065-p GWNTVPISKGSRPID 0.578430841952696 0.0362628473776946 0.0773333333333333 -0.269 4.37238093556459 19.3936208057993 0.0773333333333333 -0.269 0.365394416265141 0.0114984134193994 0.987674280392693 -3.74663539587037 Q04637 EIF4G1 Q04637.9.S1065.p_EIF4G1 Q04637-9_S1065s _1_1_1065_1065 Q04637-9 Q04637-9 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30561.30561.3 18.78 12.84 1.916 2 1 1 0 769.412 2226.2534 S1065s TMT10 1050 (R) GLPLVDDGGWNTVPIsK (G) GLPLVDDGGWNT(0.0)VPIS(0.99)K K:TMT10,s:Phosphorylated S EIF4G1 176975.4 2 16 107.1 585.61 HUMAN 1 4.3724 -19.3936 GWPFWMGSPPDSVLA-p Q8N2Y8;S1347-p GWPFWMGSPPDSVLA 0.313661039948615 0.180123204506316 -0.153666666666667 -0.136666666666667 9.4182523112168 9.79162098870275 -0.153666666666667 -0.136666666666667 0.11433383446862 0.104915076377311 -1.8807925879631 -1.94476155294885 Q8N2Y8 RUSC2 Q8N2Y8.S1347.p_RUSC2 Q8N2Y8_S1347s _1_1_1347_1347 Q8N2Y8 Q8N2Y8 Iporin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.36029.36029.3 11.74 11.74 11.741 2 1 1 0 837.4138 2430.259 S1347s TMT10 1340 (R) GWPFWMGsPPDSVLAELRR (S) GWPFWMGS(0.99)PPDS(0.0)VLAELRR s:Phosphorylated S RUSC2 163333.5 1 6 1536.1 133.33 HUMAN 1 -9.4183 -9.7916 GWRPRGDSLILEHQW-p O60333-2;S1441-p GWRPRGDSLILEHQW 0.139661670983594 0.0483787683066092 -0.254 0.247 17.4938812306711 17.5899889292593 -0.254 0.247 0.0178078659136335 0.0174181131349335 -3.36055103383155 3.37707138159344 O60333 KIF1B O60333.2.S1441.p_KIF1B O60333-2_S1441s _1_1_1441_1441 O60333-2 O60333-4|Q4R9M9|A0A087WWA3|O60333-2 Isoform 2 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31021.31021.4 25.64 25.64 99 1 1 1 0 889.4832 3474.9451 S1441s TMT10 1439 (R) GDsLILEHQWELEKLELLHEVEK (T) GDS(1.0)LILEHQWELEKLELLHEVEK K:TMT10,s:Phosphorylated S KIF1B 200628.3 13 8 606.1 262.24 HUMAN 1 -17.4939 17.59 GWSTSENSLNVMLES-p Q9Y294;S192-p GWSTSENSLNVMLES 0.165550225714236 0.0309493789111342 0.315333333333333 0.281333333333333 15.6230454712448 20.3980520682984 0.315333333333333 0.281333333333333 0.0273965232883454 0.00912419993368325 2.99614112923427 3.9611010840002 Q9Y294 ASF1A Q9Y294.S192.p_ASF1A Q9Y294_S192s _1_1_192_192 Q9Y294 Q9Y294 Histone chaperone ASF1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.29530.29530.3 10.94 10.94 3.295 5 1 1 0 879.6904 2557.1029 S192s TMT10 185 (K) GWSTSENsLNVMLESHMDCM (-) GWS(0.0)T(0.0)S(0.0)ENS(0.99)LNVMLES(0.0)HMDCM C:Carbamidomethylation,s:Phosphorylated S ASF1A 23139.4 2 3 3535.1 48.84 HUMAN 1 15.623 20.3981 GWTGKQKSPDGVHRV-p Q9UMN6;S1164-p GWTGKQKSPDGVHRV 0.283177951218012 0.789604531805851 0.175333333333333 0.0423333333333334 10.3554680238221 1.42608458924373 0.175333333333333 0.0423333333333334 0.0921410586220229 0.72009789448339 2.04354077758651 0.377548379371477 Q9UMN6 KMT2B Q9UMN6.S1164.p_KMT2B Q9UMN6_S1164s _1_1_1164_1164 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3349.3349.3 11.32 11.32 99 1 1 1 0 521.2808 1481.8589 S1164s TMT10 1162 (K) QKsPDGVHR (V) QKS(1.0)PDGVHR K:TMT10,s:Phosphorylated S KMT2B 297845.7 5 14 388.1 332.76 HUMAN 1 10.3555 1.4261 GWYDADLSPAGHEEA-p P18669;S31-p GWYDADLSPAGHEEA 0.16959910340322 0.0205990955055943 0.445333333333333 -0.507 15.3710207596486 23.0714417865043 0.445333333333333 -0.507 0.0290334017726718 0.00493010105508647 2.9483304172846 -4.56620187846219 P18669 PGAM1 P18669.S31.p_PGAM1 P18669_S31s _1_1_31_31 P18669 P18669 Phosphoglycerate mutase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19368.19368.4 19.29 19.29 6.358 3 1 1 0 669.3229 2594.304 S31s TMT10 22 (R) FSGWYDADLsPAGHEEAKR (G) FS(0.0)GWY(0.0)DADLS(0.99)PAGHEEAKR K:TMT10,s:Phosphorylated S PGAM1 28917.5 2 3 1193.1 167.89 HUMAN 1 15.371 -23.0714 GYAFVQYSNERHARA-p Q9UKM9-2;S63-p GYAFVQYSNERHARA 0.63193782040113 0.146775028717941 0.0803333333333333 0.203666666666667 3.71190736317717 10.9740416416779 0.0803333333333333 0.203666666666667 0.425411537052658 0.0799090257586744 0.861643643102143 2.15059534127215 Q9UKM9 RALY Q9UKM9.2.S63.p_RALY Q9UKM9-2_S63s _1_1_63_63 Q9UKM9-2 Q9UKM9|Q9UKM9-2 Isoform 1 of RNA-binding protein Raly HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15339.15339.2 12.93 12.93 4.734 3 1 1 0 821.8784 1562.7801 S63s TMT10 56 (K) GYAFVQYsNER (H) GY(0.0)AFVQY(0.0)S(0.99)NER s:Phosphorylated S RALY 30420.5 3 4 967.1 193.88 HUMAN 1 3.7119 10.974 GYEDYLQSPLQPLMD-p O14744;S310-p GYEDYLQSPLQPLMD 0.290079611219067 0.140620659695676 -0.174333333333333 0.176 10.1307453947557 11.2264496145855 -0.174333333333333 0.176 0.0970343409531146 0.0753971688577169 -2.00443483853149 2.19481675083508 O14744 PRMT5 O14744.S310.p_PRMT5 O14744_S310s_1_1_310_310 O14744 O14744|O14744-2|O14744-5|O14744-3|O14744-4 Protein arginine N-methyltransferase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36668.36668.5 20.91 20.91 2.657 6 1 1 0 892.4491 4377.2455 S310s N318n TMT10 303 (K) GYEDYLQsPLQPLMDnLESQTYEVFEKDPIK (Y) GY(0.0)EDY(0.0)LQS(0.99)PLQPLMDN(1.0)LES(0.0)QT(0.0)Y(0.0)EVFEKDPIK K:TMT10,s:Phosphorylated S,n:Deamidated PRMT5 73367.2 5 1 3955.1 40.29 HUMAN 1 -10.1307 11.2264 GYGCPLLSDLTLSPV-p Q5TGY3;S1544-p GYGCPLLSDLTLSPV 0.458740586170401 0.301349365380001 0.113333333333333 -0.117 6.2429764901867 6.8785557156211 0.113333333333333 -0.117 0.237521184825162 0.205184442422997 1.32773465263496 -1.43934707424587 Q5TGY3 AHDC1 Q5TGY3.S1544.p_AHDC1 Q5TGY3_S1544s _1_1_1544_1544 Q5TGY3 Q5TGY3 AT-hook DNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30359.30359.2 7.16 7.16 7.163 4 1 1 0 1217.5942 2354.2173 S1544s Hydrogen 1530 (R) GPAAAAAGYGCPLLsDLTLSPVPR (D) GPAAAAAGY(0.0)GCPLLS(0.99)DLT(0.0)LS(0.0)PVPR C:Carbamidomethylation,s:Phosphorylated S AHDC1 170057.9 3 20 334.1 355.89 HUMAN 1 6.243 -6.8786 GYGDRTSTFCGTPEF-p Q16513;T816-p GYGDRTSTFCGTPEF 0.957810192524261 0.0362630532181168 0.008 0.283 0.363214190328995 19.392384568876 0.008 0.283 0.919768603949058 0.0115016869554811 0.105514530746669 3.74637542184167 Q16513 PKN2 Q16513.T816.p_PKN2 Q16513_T816t _1_1_816_816 Q16513 Q16513|Q16513-2|Q16513-3|Q16513-4|Q16513-5 Serine/threonine-protein kinase N2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28591.28591.5 22.06 20.41 1.103 10 1 1 0 757.1458 3701.7301 T816t TMT10 806 (K) EGMGYGDRTStFCGTPEFLAPEVLTETSYTR (A) EGMGY(0.0)GDRT(0.0)S(0.0)T(0.99)FCGT(0.0)PEFLAPEVLT(0.0)ET(0.0)S(0.0)Y(0.0)T(0.0)R C:Carbamidomethylation,t:Phosphorylated T PKN2 112888.4 10 11 389.1 332.6 HUMAN 1 0.3632 19.3924 GYGFNLHSDKSKPGQ-p O14745;S170-p GYGFNLHSDKSKPGQ 0.112193120608589 0.0269650314960481 -0.467333333333333 0.476666666666667 19.8427512885123 21.2979901365047 -0.467333333333333 0.476666666666667 0.0103687134184286 0.00741653390309136 -3.84528408109257 4.15899894527516 O14745 SLC9A3R1 O14745.S170.p_SLC9A3R1 O14745_S170s _1_1_170_170 O14745 O14745|O14745-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13045.13045.4 15.79 9.1 15.789 3 1 1 0 569.303 2194.2224 S170s TMT10 159 (K) KGPSGYGFNLHsDK (S) KGPS(0.0)GY(0.0)GFNLHS(0.99)DK K:TMT10,s:Phosphorylated S SLC9A3R1 39153 1 4 534.1 279.04 HUMAN 1 -19.8428 21.298 GYGGSRDSYSSSRSD-p P38159;S326-p GYGGSRDSYSSSRSD 0.708467956824754 0.469596597940083 -0.065 0.093 2.81295813519642 4.37633883579335 -0.065 0.093 0.523243915016751 0.365061569333753 -0.682159018290672 0.988238414615968 P38159 RBMX P38159.S326.p_RBMX P38159_S326s _1_1_326_326 P38159 P38159|Q96E39|P38159-2|H3BUY5 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3329.3329.2 13.44 8 2.178 7 1 1 0 787.2998 1493.6251 S326s Hydrogen 318 (R) DGYGGSRDsYSSSR (S) DGY(0.0)GGS(0.0)RDS(0.99)Y(0.0)S(0.0)S(0.0)S(0.0)R s:Phosphorylated S RBMX 42331.1 11 27 102.1 595.29 HUMAN 1 -2.813 4.3763 GYHTRSGSEEAVTDP-p Q92508;S1621-p GYHTRSGSEEAVTDP 0.452192101778898 0.434540295570468 0.122333333333333 -0.128666666666667 6.35809061238975 4.82336671608588 0.122333333333333 -0.128666666666667 0.231308151929427 0.329354292790742 1.3481130403247 -1.07137738216549 Q92508 PIEZO1 Q92508.S1621.p_PIEZO1 Q92508_S1621s _1_1_1621_1621 Q92508 Q92508 Piezo-type mechanosensitive ion channel component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19748.19748.3 17.67 10.52 2.019 5 1 1 0 973.7843 2839.373 S1621s TMT10 1619 (R) SGsEEAVTDPGEREAGASLYQGLMR (T) S(0.0)GS(0.99)EEAVT(0.0)DPGEREAGAS(0.0)LY(0.0)QGLMR s:Phosphorylated S PIEZO1 290036.4 1 4 1703.1 120.26 HUMAN 1 6.3581 -4.8234 GYILTCPSNLGTGLR-p P12532-2;S349-p GYILTCPSNLGTGLR 0.701611654046682 0.0137666211706542 0.055 0.441 2.89360368884561 25.8546334365385 0.055 0.441 0.513617285349684 0.00259738696292466 0.698717899681673 5.25668167389649 P12532 CKMT1B P12532.2.S349.p_CKMT1B P12532-2_S349s _1_1_349_349 P12532-2 P12532-2|P17540 Isoform 2 of Creatine kinase U-type, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29840.29840.2 18.73 18.73 2.612 4 1 1 0 1022.5292 1964.0836 S349s TMT10 341 (R) LGYILTCPsNLGTGLR (A) LGY(0.0)ILT(0.0)CPS(0.99)NLGT(0.0)GLR C:Carbamidomethylation,s:Phosphorylated S CKMT1A 50933.3 4 6 1688.1 120.83 HUMAN 1 2.8936 25.8546 GYKAKQGYVIYRIRV-p P61313;Y59-p GYKAKQGYVIYRIRV 0.988589863314434 0.0345415411834839 0.00333333333333333 -0.403 0.101884260973006 19.6892794405747 0.00333333333333333 -0.403 0.976813321819085 0.0107416761801229 0.0304321416276614 -3.80908759043731 P61313 RPL15 P61313.Y59.p_RPL15 P61313_Y59y _1_1_59_59 P61313 P61313|P61313-2 60S ribosomal protein L15 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11565.11605.2 16.12 6.15 6.227 2 1 1 0 818.4558 1555.9361 Y59y TMT10 55 (K) AKQGyVIYR (I) AKQGY(0.99)VIY(0.0)R K:TMT10,y:Phosphorylated Y RPL15 24259.7 6 1 60.1 38.16 HUMAN 1 0.1019 -19.6893 GYKVEEKSP______-p S5FZ81;S376-p GYKVEEKSP______ 0.493546980184119 0.54050937745623 0.106 0.0723333333333334 5.64655953498106 3.59442201232953 0.106 0.0723333333333334 0.27248590766823 0.437076844262161 1.22133521147682 0.838631321972845 S5FZ81 NotFound S5FZ81.S376.p_NotFound S5FZ81_S376s _1_1_376_376 S5FZ81 S5FZ81 PHD finger protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12994.12994.4 14.7 14.7 14.698 3 1 1 0 522.5408 2007.173 S376s TMT10 366 (K) SVPGYKVEEKsP (-) S(0.0)VPGY(0.0)KVEEKS(0.99)P K:TMT10,s:Phosphorylated S PHF10 42782.4 8 8 1372.1 149.1 HUMAN 1 5.6466 3.5944 GYLSDGDSPELTTKA-p Q5VT97;S626-p GYLSDGDSPELTTKA 0.625010568942101 0.291404043213994 0.108333333333333 0.101 3.79316720867016 7.06778729499485 0.108333333333333 0.101 0.417525763759424 0.196436085229526 0.877380957172141 1.4724631165786 Q5VT97 SYDE2 Q5VT97.S626.p_SYDE2 Q5VT97_S626s _1_1_626_626 Q5VT97 Q5VT97|Q5VT97-2 Rho GTPase-activating protein SYDE2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16878.16878.3 12.55 12.55 3.148 5 1 1 0 693.3416 1998.0432 S626s TMT10 618 (K) GGYLSDGDsPELTTK (A) GGY(0.0)LS(0.0)DGDS(0.99)PELT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S SYDE2 134825.4 1 4 2624.1 76.52 HUMAN 1 3.7932 7.0678 GYLTDLNSMIPTHGG-p O94906;S279-p GYLTDLNSMIPTHGG 0.948131958402904 0.900065688130114 -0.0116666666666667 0.0146666666666667 0.460335484150227 0.639601674346849 -0.0116666666666667 0.0146666666666667 0.899428099752307 0.863057701952057 -0.132431634247936 0.180844019056774 O94906 PRPF6 O94906.S279.p_PRPF6 O94906_S279s _1_1_279_279 O94906 O94906|O94906-2 Pre-mRNA-processing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25504.25504.4 20.98 15.42 3.382 4 1 1 0 793.1711 3089.6908 S279s TMT10 272 (K) GYLTDLNsMIPTHGGDINDIKK (A) GY(0.0)LT(0.0)DLNS(0.99)MIPT(0.0)HGGDINDIKK K:TMT10,s:Phosphorylated S PRPF6 107721.8 2 8 1650.1 123.56 HUMAN 1 -0.4603 0.6396 GYMRLDDSGIGVPSV-p A4D161;S210-p GYMRLDDSGIGVPSV 0.343971444723671 0.0368200010402739 -0.173333333333333 -0.335 8.60756673560476 19.2875042736728 -0.173333333333333 -0.335 0.137798130778702 0.0117828289366981 -1.74043072383528 -3.72435440635587 A4D161 FAM221A A4D161.S210.p_FAM221A A4D161_S210s _1_1_210_210 A4D161 A4D161|B8ZZQ8 Protein FAM221A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37960.37960.4 17.98 17.98 4.757 5 1 1 0 843.4431 3290.7812 S210s TMT10 207 (R) LDDsGIGVPSVEFLESPITAVDSPFLK (A) LDDS(0.99)GIGVPS(0.0)VEFLES(0.0)PIT(0.0)AVDS(0.0)PFLK K:TMT10,s:Phosphorylated S FAM221A 33937.8 2 1 5582.1 17.98 HUMAN 1 -8.6076 -19.2875 GYMTHTVSAPSLHGK-p E9PKC0;S643-p GYMTHTVSAPSLHGK 0.338038342621858 0.76449312169343 0.188333333333333 0.0373333333333334 8.76989885062942 1.61096897937168 0.188333333333333 0.0373333333333334 0.132742537377474 0.690085817650731 1.7685321036973 0.420768743082805 E9PKC0 PLEKHA7 E9PKC0.S643.p_PLEKHA7 E9PKC0_S643s _1_1_643_643 E9PKC0 E9PKC0|Q6IQ23-2|Q6IQ23-3 Pleckstrin homology domain-containing family A member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17930.17930.4 20.35 20.35 1.137 7 1 1 0 665.0708 2577.3028 S643s TMT10 631 (R) SMPSMGYMTHTVsAPSLHGK (S) S(0.0)MPS(0.0)MGY(0.0)MT(0.0)HT(0.0)VS(0.99)APS(0.0)LHGK K:TMT10,s:Phosphorylated S PLEKHA7 144991.9 1 8 809.1 221.2 HUMAN 1 8.7699 1.611 GYNYKAKSAGNLDES-p Q15276;S430-p GYNYKAKSAGNLDES 0.421140316027267 0.050795413524245 0.106666666666667 0.231333333333333 6.9165965527522 17.2860634216656 0.106666666666667 0.231333333333333 0.203395033786339 0.0186807220156375 1.44640583847778 3.3166109588827 Q15276 RABEP1 Q15276.S430.p_RABEP1 Q15276_S430s_1_1_430_430 Q15276 Q15276|Q15276-2 Rab GTPase-binding effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.35363.35363.5 27.95 23.44 3.408 9 1 1 0 1035.9127 5078.5582 S430s N451n M467m TMT10 428 (K) AKsAGNLDESDFGPLVGADSVSEnFDTASLGSLQMPSGFmLTK (D) AKS(0.99)AGN(0.0)LDES(0.0)DFGPLVGADS(0.0)VS(0.0)EN(0.99)FDT(0.0)AS(0.0)LGS(0.0)LQM(0.0)PS(0.0)GFM(0.99)LT(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated,m:Oxidized methionine RABEP1 99688.1 17 6 933.1 198.92 HUMAN 1 6.9166 17.2861 GYPHGNGSPGPGHGE-p Q8WWA1;S99-p GYPHGNGSPGPGHGE 0.602377813619717 0.118687857455807 0.0746666666666667 -0.176666666666667 4.06434356933602 12.2046823356636 0.0746666666666667 -0.176666666666667 0.392252430315203 0.0601910287967234 0.929409113883679 -2.36748793217583 Q8WWA1 TMEM40 Q8WWA1.S99.p_TMEM40 Q8WWA1_S99s_1_1_99_99 Q8WWA1 Q8WWA1 Transmembrane protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24571.24571.5 18.54 14.34 2.375 6 1 1 0 1022.5126 5027.5176 N97n S99s TMT10 88 (R) SLGAGYPHGnGsPGPGHGEPDVLKDELQLYGDAPGEVVPSGESGLR (R) S(0.0)LGAGY(0.0)PHGN(1.0)GS(0.99)PGPGHGEPDVLKDELQLY(0.0)GDAPGEVVPS(0.0)GES(0.0)GLR K:TMT10,n:Deamidated,s:Phosphorylated S TMEM40 25608.5 3 1 1848.1 111.18 HUMAN 1 4.0643 -12.2047 GYQSLSDSPPGSRVF-p J3KNP4;S793-p GYQSLSDSPPGSRVF 0.0650471958528329 0.40655990076254 0.386 0.115666666666667 25.6756133620803 5.20289343401007 0.386 0.115666666666667 0.00270669090599338 0.301794038449433 5.21694927980168 1.14087413999347 J3KNP4 SEMA4B J3KNP4.S793.p_SEMA4B J3KNP4_S793s _1_1_793_793 J3KNP4 J3KNP4|Q9NPR2 Semaphorin-4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9357.9569.2 15.71 13.53 1.209 5 1 1 0 830.3827 1579.7914 S793s TMT10 786 (R) GYQSLSDsPPGSR (V) GY(0.0)QS(0.0)LS(0.0)DS(0.99)PPGS(0.0)R s:Phosphorylated S SEMA4B 94133.5 2 2 2228.1 92.61 HUMAN 1 25.6756 5.2029 GYQYKQRSLSPVAAP-p Q8NDT2;S265-p GYQYKQRSLSPVAAP 0.572301168829667 0.232919094154321 0.091 0.237333333333333 4.46510810051786 8.33290004035404 0.091 0.237333333333333 0.357675497541937 0.146794571637315 1.0050551423324 1.69230613881654 Q8NDT2 RBM15B Q8NDT2.S265.p_RBM15B Q8NDT2_S265sS267s_2_2_265_267 Q8NDT2 Q8NDT2 Putative RNA-binding protein 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15237.15237.3 12.98 12.98 99 2 2 2 0 639.6428 1774.0082 Q263q S265s S267s Hydrogen 263 (K) qRsLsPVAAPPLREPR (A) Q(1.0)RS(1.0)LS(1.0)PVAAPPLREPR q:Pyroglutamic acid,s:Phosphorylated S RBM15B 97489 4 20 199.1 454.11 HUMAN 1 4.4651 8.3329 GYRKRSSSMADGDNS-p Q9ULV0;S1644-p GYRKRSSSMADGDNS 0.200797395490016 0.948265711627684 -0.212666666666667 -0.00966666666666666 13.5465827295785 0.330027837284165 -0.212666666666667 -0.00966666666666666 0.0441918036262773 0.926823882630951 -2.61004044840029 -0.0961914796752858 Q9ULV0 MYO5B Q9ULV0.S1644.p_MYO5B Q9ULV0_S1644s _1_1_1644_1644 Q9ULV0 Q9ULV0|Q9ULV0-2|Q9ULV0-3 Unconventional myosin-Vb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24423.24423.2 13.58 13.58 1.578 5 1 1 0 1149.5011 2218.0317 S1644s TMT10 1642 (R) SSsMADGDNSYCLEAIIR (Q) S(0.0)S(0.0)S(0.99)MADGDNS(0.0)Y(0.0)CLEAIIR C:Carbamidomethylation,s:Phosphorylated S MYO5B 215266.1 3 64 296.7 379.15 HUMAN 1 -13.5466 -0.33 GYRPIIQSPGYKTGK-p Q9ULL5-3;S386-p GYRPIIQSPGYKTGK 0.42639754304777 0.0624393083691498 -0.112 -0.303333333333333 6.81936456767589 16.0323263454199 -0.112 -0.303333333333333 0.208000099748211 0.0249325882809102 -1.4293553969401 -3.07222348254625 Q9ULL5 PRR12 Q9ULL5.3.S386.p_PRR12 Q9ULL5-3_S386s _1_1_386_386 Q9ULL5-3 Q9ULL5-3 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14915.14915.3 18.11 12.32 7.805 4 1 1 0 1033.5226 3018.5798 S386s TMT10 362 (R) ATGPEAAGGGGAGGGGGGYRPIIQsPGYK (T) AT(0.0)GPEAAGGGGAGGGGGGY(0.0)RPIIQS(0.99)PGY(0.0)K K:TMT10,s:Phosphorylated S PRR12 212010 2 5 182.1 477.91 HUMAN 1 -6.8194 -16.0323 GYSFVAPSILFKRNA-p O75582;S381-p GYSFVAPSILFKRNA 0.143072165522907 0.0510791354230591 -0.283 1.38033333333333 17.2499828986667 17.2510745804349 -0.283 1.38033333333333 0.0188365650680126 0.0188318307342328 -3.31203438807308 3.30968218865057 O75582 RPS6KA5 O75582.S381.p_RPS6KA5 O75582_S376sS381s_2_2_376_381 O75582 O75582|O75582-3|O75582-2 Ribosomal protein S6 kinase alpha-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.37635.37635.3 12.47 12.47 5.933 3 2 2 0 779.0709 2175.2618 S376s S381s TMT10 371 (K) LFQGYsFVAPsILFK (R) LFQGY(0.0)S(0.99)FVAPS(0.99)ILFK K:TMT10,s:Phosphorylated S RPS6KA5 90434.3 1 7 2444.1 83.26 HUMAN 1 -17.25 17.2511 GYSRRFRSFSELPSC-p Q8NEV8;S1851-p GYSRRFRSFSELPSC 0.873798109188382 0.00816516217631883 0.0253333333333333 -0.449 1.14697161723441 29.7336531916118 0.0253333333333333 -0.449 0.76789676549876 0.00106324826042289 0.310348992053659 -6.34156003889674 Q8NEV8 EXPH5 Q8NEV8.S1851.p_EXPH5 Q8NEV8_S1851s _1_1_1851_1851 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21671.21671.3 18.7 18.7 1.275 5 1 1 0 873.05 2537.1717 S1851s TMT10 1849 (R) FRsFSELPSCDGNESWAYR (S) FRS(0.99)FS(0.0)ELPS(0.0)CDGNES(0.0)WAY(0.0)R C:Carbamidomethylation,s:Phosphorylated S EXPH5 223884.5 2 30 129.1 537.25 HUMAN 1 1.147 -29.7337 GYTSDDDTWEPEIHL-p Q99549-2;T89-p GYTSDDDTWEPEIHL 0.166418742440273 0.00455061128120994 -1.02933333333333 0.714 15.579857256486 34.3252956451098 -1.02933333333333 0.714 0.0276703259049161 0.000369377498202234 -2.98792787621778 7.84910514471971 Q99549 MPHOSPH8 Q99549.2.T89.p_MPHOSPH8 Q99549-2_T89t _1_1_89_89 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22036.22036.3 20.66 20.66 1.155 4 1 1 0 950.0865 2768.2762 T89t TMT10 82 (K) GYTSDDDtWEPEIHLEDCK (E) GY(0.0)T(0.0)S(0.0)DDDT(0.99)WEPEIHLEDCK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MPHOSPH8 98148.4 2 4 242.1 413.34 HUMAN 1 -15.5799 34.3253 GYVSARASPGLLPVA-p Q14814;S231-p GYVSARASPGLLPVA 0.476013173763736 0.0139198093936428 0.0946666666666667 0.418666666666667 5.93750546634932 25.7623693096601 0.0946666666666667 0.418666666666667 0.254829354050791 0.00265315772703334 1.27342269255506 5.2326970232464 Q14814 MEF2D Q14814.S231.p_MEF2D Q14814_S231s_1_1_231_231 Q14814 Q14814|Q14814-2|Q14814-4|Q14814-5|Q14814-3|Q14814-6 Myocyte-specific enhancer factor 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22984.23399.3 17.98 17.98 3.223 2 1 1 0 697.7136 2010.1748 S231s N239n TMT10 230 (R) AsPGLLPVAnGNSLNK (V) AS(0.99)PGLLPVAN(0.99)GN(0.0)S(0.0)LN(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated MEF2D 56165 12 7 1187.1 168.72 HUMAN 1 5.9375 25.7624 HAADKLLSAGATKVY-p P11908;S238-p HAADKLLSAGATKVY 0.433984623040525 0.087968173252397 -0.115333333333333 0.197 6.68140734710497 13.975119117985 -0.115333333333333 0.197 0.21471345745939 0.0400394486188134 -1.40512171568265 2.68674320313736 P11908 PRPS2 P11908.S238.p_PRPS2 P11908_S238s _1_1_238_238 P11908 P11908-2 Ribose-phosphate pyrophosphokinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17047.17047.2 10.87 3.02 4.436 2 1 1 0 649.8782 1218.7822 S238s TMT10 236 (K) LLsAGATK (V) LLS(0.99)AGAT(0.0)K K:TMT10,s:Phosphorylated S PRPS2 35167.9 1 1 2695.2 73.72 HUMAN 1 -6.6814 13.9751 HAAEEASSEDEEEEE-p Q7Z6Z7;S727-p HAAEEASSEDEEEEE 0.82642168732256 0.0244383221956364 -0.0463333333333333 0.416666666666667 1.59707003652935 21.951335543856 -0.0463333333333334 0.416666666666667 0.692297871485497 0.00638067237364732 -0.417598410012439 4.30626909175822 Q7Z6Z7 HUWE1 Q7Z6Z7.S727.p_HUWE1 Q7Z6Z7_S726sS727s_2_2_726_727 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19191.19191.5 24.96 24.96 0 8 2 2 0 1069.2449 5181.242 S726s S727s N747n TMT10 718 (R) SNHAAEEAssEDEEEEEVQAMQSFNSTQQnETEPNQQVVGTEER (I) S(0.0)N(0.0)HAAEEAS(0.99)S(0.99)EDEEEEEVQAMQS(0.0)FN(0.50)S(0.0)T(0.0)QQN(0.50)ET(0.0)EPN(0.0)QQVVGT(0.0)EER s:Phosphorylated S,n:Deamidated HUWE1 485818.9 4 66 11.1 1210.45 HUMAN 1 -1.5971 21.9513 HAALGDASEVEIDEL-p Q8WXG6;S669-p HAALGDASEVEIDEL 0.214645602887438 0.307850772934094 -0.274333333333333 0.111666666666667 12.8826860750628 6.76176748247966 -0.274333333333333 0.111666666666667 0.051491007849787 0.210777015952046 -2.48994891730499 1.41886527381804 Q8WXG6 MADD Q8WXG6.S669.p_MADD Q8WXG6_S669s _1_1_669_669 Q8WXG6 Q8WXG6|Q8WXG6-2|A0A0A0MRB5|Q8WXG6-3|Q8WXG6-7|Q8WXG6-4|Q8WXG6-5|Q8WXG6-8|Q8WXG6-6 MAP kinase-activating death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.26170.26170.3 21.06 21.06 7.022 3 1 1 0 1372.9843 4036.981 S669s TMT10 648 (K) CDINGDTPNVDPLTHAALGDAsEVEIDELQNQK (E) CDINGDT(0.0)PNVDPLT(0.0)HAALGDAS(0.99)EVEIDELQNQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MADD 184612.2 2 3 546.1 275.73 HUMAN 1 -12.8827 6.7618 HADDSRISEDETERN-p Q9UKV3-5;S885-p HADDSRISEDETERN 0.411414426364872 0.0387074073103941 0.110333333333333 0.253666666666667 7.11632953266489 18.9630518439429 0.110333333333333 0.253666666666667 0.194252692296391 0.0126968156985528 1.48136111478491 3.65666168431347 Q9UKV3 ACIN1 Q9UKV3.5.S885.p_ACIN1 Q9UKV3-5_S885s _1_1_885_885 Q9UKV3-5 Q9UKV3-5 Isoform 4 of Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11137.11137.4 17.93 11.22 1.1 4 1 1 0 941.683 3683.7421 S885s TMT10 872 (K) EAVVDLHADDSRIsEDETERNGDDGTHDK (G) EAVVDLHADDS(0.0)RIS(0.99)EDET(0.0)ERNGDDGT(0.0)HDK K:TMT10,s:Phosphorylated S ACIN1 150953.7 4 50 32.1 899.18 HUMAN 1 7.1163 18.9631 HADSCVVSSDDEELS-p P78317;S94-p HADSCVVSSDDEELS 0.238898769658179 0.0974268457747565 -0.271333333333333 -0.368 11.8912845794412 13.370994590484 -0.271333333333333 -0.368 0.0646951228751428 0.0460151180947069 -2.31306624343356 -2.57667579269038 P78317 RNF4 P78317.S94.p_RNF4 P78317_S94sS95s_2_2_94_95 P78317 P78317 E3 ubiquitin-protein ligase RNF4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11824.11824.5 15.04 15.04 2.162 8 2 2 0 849.7811 4084.958 S94s S95s TMT10 82 (R) RLPQDHADSCVVssDDEELSRDRDVYVTTHTPR (N) RLPQDHADS(0.0)CVVS(0.99)S(0.99)DDEELS(0.0)RDRDVY(0.0)VT(0.0)T(0.0)HT(0.0)PR C:Carbamidomethylation,s:Phosphorylated S RNF4 21832 1 1 5953.1 15.04 HUMAN 1 -11.8913 -13.371 HAEHQVRSMDELNHD-p Q5T1Z8;S160-p HAEHQVRSMDELNHD 0.92600024412102 0.490693222613676 0.0326666666666667 0.100666666666667 0.658934266266579 4.1316521525036 0.0326666666666666 0.100666666666667 0.859224344359796 0.3862200224434 0.185992345532261 0.942049399888468 Q5T1Z8 NotFound Q5T1Z8.S160.p_NotFound Q5T1Z8_S160s _1_1_160_160 Q5T1Z8 Q5T1Z8|Q5T1Z4|Q14671-3|Q14671-2|Q14671-4|E9PR38 Pumilio homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25970.25970.3 21.5 21.5 99 1 1 1 0 752.3475 2175.0702 S160s TMT10 160 (R) sMDELNHDFQALALEGR (A) S(1.0)MDELNHDFQALALEGR s:Phosphorylated S PUM1 130847.9 2 6 720.1 237.18 HUMAN 1 0.6589 4.1317 HAFFRLRTPGNSKSN-p Q9H329-2;T369-p HAFFRLRTPGNSKSN 0.624231671813355 0.435112949830224 0.151666666666667 -0.103 3.80293906377452 4.81537646157733 0.151666666666667 -0.103 0.416587364869448 0.329960804519803 0.87926871643634 -1.06990417718269 Q9H329 EPB41L4B Q9H329.2.T369.p_EPB41L4B Q9H329-2_T369t _1_1_369_369 Q9H329-2 Q9H329|Q9H329-2 Isoform 2 of Band 4.1-like protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6821.6821.3 7.21 3.25 4.321 2 1 1 0 470.9346 1330.8207 T369t TMT10 367 (R) LRtPGNSK (S) LRT(0.99)PGNS(0.0)K K:TMT10,t:Phosphorylated T EPB41L4B 59078.9 1 1 4315.1 33.8 HUMAN 1 3.8029 -4.8154 HAFSRKPSDGSPDTK-p Q92733;S209-p HAFSRKPSDGSPDTK 0.932495418439431 0.172981136305229 -0.0143333333333333 0.156666666666667 0.601312648962045 10.0188337045102 -0.0143333333333333 0.156666666666667 0.870700382215347 0.0995672768836667 -0.17064729811621 1.98417862229208 Q92733 PRCC Q92733.S209.p_PRCC Q92733_S209s _1_1_209_209 Q92733 Q92733 Proline-rich protein PRCC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5565.5565.3 13.56 13.56 3.191 4 1 1 0 713.7174 2059.1751 S209s TMT10 207 (R) KPsDGSPDTKPSR (L) KPS(0.99)DGS(0.0)PDT(0.0)KPS(0.0)R K:TMT10,s:Phosphorylated S PRCC 52416.8 5 8 1101.1 177.58 HUMAN 1 -0.6013 10.0188 HAGLRPLSRRLEAEA-p Q6ZRV2;S377-p HAGLRPLSRRLEAEA 0.594983954089987 0.397703576808684 0.073 -0.0876666666666667 4.15939807707197 5.32345007709532 0.073 -0.0876666666666667 0.383760430187114 0.293531688156062 0.947478666918063 -1.16276741194992 Q6ZRV2 FAM83H Q6ZRV2.S377.p_FAM83H Q6ZRV2_S377s _1_1_377_377 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11591.11591.5 8.95 8.95 99 1 1 1 0 567.3005 2752.4991 S377s TMT10 356 (R) REEPPRMPGGALEPHAGLRPLsR (R) REEPPRMPGGALEPHAGLRPLS(1.0)R s:Phosphorylated S FAM83H 127633.5 1 3 7.1 1347.23 HUMAN 1 4.1594 -5.3235 HAHLRQQSYDVTDEL-p Q9GZV5;S117-p HAHLRQQSYDVTDEL 0.881297316055286 0.014505232212137 0.0256666666666667 0.360666666666667 1.0788612549466 25.475754150625 0.0256666666666667 0.360666666666667 0.780034613262992 0.00283416143975959 0.293544618142508 5.15868967858399 Q9GZV5 WWTR1 Q9GZV5.S117.p_WWTR1 Q9GZV5_S117s _1_1_117_117 Q9GZV5 Q9GZV5 WW domain-containing transcription regulator protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.35196.35196.4 26 26 3.735 6 1 1 0 819.8821 3196.5458 S117s TMT10 115 (R) QQsYDVTDELPLPPGWEMTFTATGQR (Y) QQS(0.99)Y(0.0)DVT(0.0)DELPLPPGWEMT(0.0)FT(0.0)AT(0.0)GQR s:Phosphorylated S WWTR1 44271.7 5 2 1727.1 119.24 HUMAN 1 1.0789 25.4758 HAKVLTLSDDLERTI-p P55010;S229-p HAKVLTLSDDLERTI 0.734029403449651 0.0455259854980451 -0.0623333333333333 -0.270666666666667 2.54265967201834 17.9547284522645 -0.0623333333333333 -0.270666666666667 0.556844626093982 0.0160150078093481 -0.625885664148457 -3.4502932903052 P55010 EIF5 P55010.S229.p_EIF5 P55010_S229s _1_1_229_229 P55010 P55010 Eukaryotic translation initiation factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21738.21738.2 15.06 12.26 2.381 2 1 1 0 735.3768 1389.7787 S229s TMT10 225 (K) VLTLsDDLER (T) VLT(0.0)LS(0.99)DDLER s:Phosphorylated S EIF5 49678.3 2 6 980.1 192.67 HUMAN 1 -2.5427 -17.9547 HALGSRNSPGSQVAS-p Q9H0D6;S448-p HALGSRNSPGSQVAS 0.250689107676978 0.515274726853731 0.204 0.0806666666666667 11.4665658096613 3.86573436857174 0.204 0.0806666666666667 0.0713416942691598 0.410607202538401 2.23805946538444 0.891228764444623 Q9H0D6 XRN2 Q9H0D6.S448.p_XRN2 Q9H0D6_S448s _1_1_448_448 Q9H0D6 Q9H0D6 5'-3' exoribonuclease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4883.4883.2 16.4 10.04 3.637 3 1 1 0 761.864 1442.7549 S448s TMT10 447 (R) NsPGSQVASNPR (Q) NS(0.99)PGS(0.0)QVAS(0.0)NPR s:Phosphorylated S XRN2 109493.4 4 2 608.1 262.16 HUMAN 1 11.4666 3.8657 HALLKGKSEEELEAS-p Q7RTP6;S977-p HALLKGKSEEELEAS 0.702360190260937 0.960532095177721 -0.057 0.00766666666666671 2.8852558569884 0.251902121693534 -0.057 0.00766666666666673 0.51460548903949 0.943647487315801 -0.697008527598317 0.0740214600035638 Q7RTP6 MICAL3 Q7RTP6.S977.p_MICAL3 Q7RTP6_S977s _1_1_977_977 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10248.10248.3 14.68 14.68 4.296 2 1 1 0 658.6851 1894.0736 S977s TMT10 975 (K) GKsEEELEASK (S) GKS(0.99)EEELEAS(0.0)K K:TMT10,s:Phosphorylated S MICAL3 225431.9 3 5 190.1 466.81 HUMAN 1 -2.8853 0.2519 HALSSPQSPFPSTPT-p O43166;S1568-p HALSSPQSPFPSTPT 0.742912036864882 0.372983417455098 0.053 -0.149333333333333 2.4523300146608 5.68197914858812 0.053 -0.149333333333333 0.568547819856804 0.270272640828228 0.606796912287851 -1.2274190819813 O43166 SIPA1L1 O43166.S1568.p_SIPA1L1 O43166_S1568s _1_1_1568_1568 O43166 O43166 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17175.17175.3 17.59 17.59 1.275 7 1 1 0 751.7008 2173.1239 S1568s TMT10 1560 (K) FHALSSPQsPFPSTPTSR (R) FHALS(0.0)S(0.0)PQS(0.99)PFPS(0.0)T(0.0)PT(0.0)S(0.0)R s:Phosphorylated S SIPA1L1 201223.1 1 26 46.1 777.88 HUMAN 1 2.4523 -5.682 HAPGLNLSGVGGKMQ-p Q09666;S5332-p HAPGLNLSGVGGKMQ 0.339126074934257 0.138057980544252 -0.203 -0.382666666666667 8.73666208693445 11.3309103646816 -0.203 -0.382666666666667 0.133762319586461 0.0736052790514658 -1.76277876935308 -2.21315421933088 Q09666 AHNAK Q09666.S5332.p_AHNAK Q09666_S5332s _1_1_5332_5332 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18292.18292.3 20.71 20.71 99 1 1 1 0 615.3453 1764.0532 S5332s TMT10 5324 (K) VHAPGLNLsGVGGK (M) VHAPGLNLS(1.0)GVGGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 4 132 1.1 4313.36 HUMAN 1 -8.7367 -11.3309 HAPSLHGSTELLPLS-p Q9H5N1;S193-p HAPSLHGSTELLPLS 0.931074993503674 0.167788200693427 0.0173333333333333 0.146 0.614014106343296 10.1985678357829 0.0173333333333333 0.146 0.868157635739755 0.0955307563946312 0.174043072383528 2.01539725431925 Q9H5N1 RABEP2 Q9H5N1.S193.p_RABEP2 Q9H5N1_S189sS193s_2_2_189_193 Q9H5N1 Q9H5N1|Q9H5N1-2|B4DHR0 Rab GTPase-binding effector protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18494.18494.3 7.73 7.73 1.237 4 2 2 0 702.0104 1944.0864 S189s S193s TMT10 186 (R) HAPsLHGsTELLPLSR (D) HAPS(0.99)LHGS(0.99)T(0.0)ELLPLS(0.0)R s:Phosphorylated S RABEP2 63998.1 2 2 4775.1 26.84 HUMAN 1 0.614 10.1986 HARQQVRSPVTNIAR-p Q96CW1-2;S45-p HARQQVRSPVTNIAR 0.487704096786122 0.0320503118559129 -0.106333333333333 0.332666666666667 5.74685525674004 20.1775193508106 -0.106333333333333 0.332666666666667 0.266265239889124 0.00959948788659557 -1.23933366549448 3.91344838832209 Q96CW1 AP2M1 Q96CW1.2.S45.p_AP2M1 Q96CW1-2_S45s _1_1_45_45 Q96CW1-2 E9PFW3|Q96CW1|A0A087WY71|Q96CW1-2 Isoform 2 of AP-2 complex subunit mu HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7330.7330.3 9.85 9.85 2.532 2 1 1 0 559.9722 1597.9336 S45s TMT10 41 (R) QQVRsPVTNIAR (T) QQVRS(0.99)PVT(0.0)NIAR s:Phosphorylated S AP2M1 49730.8 1 1 2614.1 76.71 HUMAN 1 -5.7469 20.1775 HARYRADTLGELDLE-p P49753;T118-p HARYRADTLGELDLE 0.93306667659969 0.463862641368469 0.0193333333333333 0.0903333333333334 0.592448033859358 4.44856706331115 0.0193333333333334 0.0903333333333334 0.872479430000772 0.359040378992557 0.168272805115003 1.00177579160625 P49753 ACOT2 P49753.T118.p_ACOT2 P49753_T118t _1_1_118_118 P49753 P49753|A0A087WT95 Acyl-coenzyme A thioesterase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17533.17533.3 11.18 8.95 11.184 2 1 1 0 620.6416 1779.9438 T118t TMT10 114 (R) YRADtLGELDLER (A) Y(0.0)RADT(0.99)LGELDLER t:Phosphorylated T ACOT2 53616.9 1 1 6521.1 11.18 HUMAN 1 0.5924 4.4486 HASHQKGSLPSGTTI-p Q9BXB4;S286-p HASHQKGSLPSGTTI 0.0963407255186167 0.00570011283768187 -0.551 0.845333333333333 21.5560260777018 32.4992069051983 -0.551 0.845333333333333 0.00698871599668806 0.000562444027556025 -4.22113549387504 7.21734151232726 Q9BXB4 OSBPL11 Q9BXB4.S286.p_OSBPL11 Q9BXB4_S286s _1_1_286_286 Q9BXB4 Q9BXB4 Oxysterol-binding protein-related protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28945.28945.3 14.88 11.35 1.588 4 1 1 0 718.3796 2073.1632 S286s TMT10 285 (K) GsLPSGTTIEWLEPK (I) GS(0.99)LPS(0.0)GT(0.0)T(0.0)IEWLEPK K:TMT10,s:Phosphorylated S OSBPL11 84383.5 1 10 1360.1 150.18 HUMAN 1 -21.556 32.4992 HASLDGASPYFKVKK-p A0A140LJL2;S324-p HASLDGASPYFKVKK 0.206937759093451 0.343252013370266 0.274 0.108333333333333 13.2261789111827 6.1521049578263 0.274 0.108333333333333 0.0475753628075615 0.242543423988253 2.55190416021135 1.31129549283275 A0A140LJL2 NotFound A0A140LJL2.S324.p_NotFound A0A140LJL2_S319sS324s_2_2_319_324 A0A140LJL2 A0A140LJL2|Q8N350|Q8N350-4 Voltage-dependent calcium channel beta subunit-associated regulatory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18073.18073.3 10.49 10.49 5.468 3 2 2 0 637.6323 1750.9528 S319s S324s TMT10 317 (R) HAsLDGAsPYFK (V) HAS(0.99)LDGAS(0.99)PY(0.0)FK K:TMT10,s:Phosphorylated S CBARP 76276.7 2 5 1993.1 103.67 HUMAN 1 13.2262 6.1521 HASLYPASGRSSPVE-p Q9NRA8;S74-p HASLYPASGRSSPVE 0.286558396626382 0.0344908139321733 -0.374666666666667 0.280666666666667 10.24194071277 19.7011881259982 -0.374666666666667 0.280666666666667 0.0945814414963574 0.0107122620323696 -2.02377695259325 3.81161470505205 Q9NRA8 EIF4ENIF1 Q9NRA8.S74.p_EIF4ENIF1 Q9NRA8_S74s _1_1_74_74 Q9NRA8 Q9NRA8-3|B1AKL4|Q9NRA8-2 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14290.14290.3 16.79 16.79 5.307 3 1 1 0 518.5875 1473.78 S74s TMT10 66 (K) WHASLYPAsGR (S) WHAS(0.0)LY(0.0)PAS(0.99)GR s:Phosphorylated S EIF4ENIF1 108541.3 3 2 150.1 511.59 HUMAN 1 -10.2419 19.7012 HASRGGQSDDDEDEG-p Q92538-3;S1475-p HASRGGQSDDDEDEG 0.443553897142878 0.920901729823762 0.103333333333333 0.016 6.50682692251834 0.503049727193338 0.103333333333333 0.016 0.223520472974449 0.890625298571493 1.37437854456227 0.144101045474152 Q92538 GBF1 Q92538.3.S1475.p_GBF1 Q92538-3_S1475s _1_1_1475_1475 Q92538-3 Q92538-2|Q92538-3 Isoform 3 of Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30914.31119.5 28 28 6.384 7 1 1 0 789.9696 3865.85 S1475s TMT10 1472 (R) GGQsDDDEDEGVPASYHTVSLQLLDLMHTLHTR (A) GGQS(0.99)DDDEDEGVPAS(0.0)Y(0.0)HT(0.0)VS(0.0)LQLLDLMHT(0.0)LHT(0.0)R s:Phosphorylated S GBF1 208066.7 9 11 543.1 276.05 HUMAN 1 6.5068 0.503 HASSSPESPKPAPAP-p Q9UQ35;S440-p HASSSPESPKPAPAP 0.30240595197169 0.231461765176933 0.202 0.131333333333333 9.73193210836423 8.37193214198449 0.202 0.131333333333333 0.106366970289802 0.145481170230439 1.93517324638649 1.6990622828672 Q9UQ35 SRRM2 Q9UQ35.S440.p_SRRM2 Q9UQ35_S440s _1_1_440_440 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3608.3608.4 18.27 18.27 2.459 5 1 1 0 609.5609 2355.257 S440s TMT10 433 (R) HASSSPEsPKPAPAPGSHR (E) HAS(0.0)S(0.0)S(0.0)PES(0.99)PKPAPAPGS(0.0)HR K:TMT10,s:Phosphorylated S SRRM2 300351.7 3 15 2.1 3310.34 HUMAN 1 9.7319 8.3719 HATKFSDSHPELAAS-p Q13796;S125-p HATKFSDSHPELAAS 0.160078188700121 0.408093737457507 0.282333333333333 0.082 15.91787369287 5.18215912677491 0.282333333333333 0.082 0.0255983887805661 0.30323832378808 3.05243700589279 1.13710035508332 Q13796 SHROOM2 Q13796.S125.p_SHROOM2 Q13796_S125s _1_1_125_125 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22477.22477.3 17.81 17.81 1.228 9 1 1 0 993.1064 2897.3362 S125s TMT10 122 (K) FSDsHPELAASPFTSTSGCPSWSGR (H) FS(0.0)DS(0.99)HPELAAS(0.0)PFT(0.0)S(0.0)T(0.0)S(0.0)GCPS(0.0)WS(0.0)GR C:Carbamidomethylation,s:Phosphorylated S SHROOM2 177605.1 1 2 90.1 622.62 HUMAN 1 15.9179 5.1822 HAVAEPASPEQELDQ-p P46013;S308-p HAVAEPASPEQELDQ 0.565463798430317 0.0918530837543221 0.0766666666666667 -0.195 4.56249412499174 13.7142001887717 0.0766666666666667 -0.195 0.349744253489857 0.0425187003453878 1.02323563258219 -2.6390493636896 P46013 MKI67 P46013.S308.p_MKI67 P46013_S308s _1_1_308_308 P46013 P46013 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11633.11633.3 24.01 21.4 24.007 3 1 1 0 916.1075 2666.3422 S308s TMT10 296 (K) SGGSGHAVAEPAsPEQELDQNK (G) S(0.0)GGS(0.0)GHAVAEPAS(0.99)PEQELDQNK K:TMT10,s:Phosphorylated S MKI67 360912.4 4 4 5.1 1918.46 HUMAN 1 4.5625 -13.7142 HAVIMEKSNDHFIVK-p Q9UKL3;S1537-p HAVIMEKSNDHFIVK 0.812807099927467 0.359465259632952 -0.114666666666667 -0.236666666666667 1.73195094392427 5.89522204053305 -0.114666666666667 -0.236666666666667 0.671127300426961 0.257322520049308 -0.448586944873006 -1.26557954441662 Q9UKL3 CASP8AP2 Q9UKL3.S1537.p_CASP8AP2 Q9UKL3_S1537s _1_1_1537_1537 Q9UKL3 Q9UKL3|A0A087WTW5 CASP8-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12775.12775.3 9.85 9.85 99 1 1 1 0 499.9334 1417.8204 S1537s TMT10 1537 (K) sNDHFIVK (I) S(1.0)NDHFIVK K:TMT10,s:Phosphorylated S CASP8AP2 224993 1 13 740.1 234.21 HUMAN 1 -1.732 -5.8952 HAVLKSLSPVDPVEP-p Q9HBM0;S617-p HAVLKSLSPVDPVEP 0.238535570822241 0.0255648700422489 -0.173666666666667 -0.311 11.9073713590649 21.6657297398132 -0.173666666666667 -0.311 0.0644559277896314 0.00681439063717193 -2.31591556708611 -4.24150830546049 Q9HBM0 VEZT Q9HBM0.S617.p_VEZT Q9HBM0_S617s _1_1_617_617 Q9HBM0 Q9HBM0 Vezatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23887.23887.4 17.57 17.57 2.233 6 1 1 0 764.6154 2975.4742 S617s TMT10 615 (K) SLsPVDPVEPISNSEPSMNSDMGK (V) S(0.0)LS(0.99)PVDPVEPIS(0.0)NS(0.0)EPS(0.0)MNS(0.0)DMGK K:TMT10,s:Phosphorylated S VEZT 89518.7 2 1 2200.1 93.61 HUMAN 1 -11.9074 -21.6657 HAYFAPVTPPPSVGG-p J3KTA1;T419-p HAYFAPVTPPPSVGG 0.201147832961288 0.122725456198322 0.196666666666667 0.206333333333333 13.5308063768956 12.016841315178 0.196666666666667 0.206333333333333 0.0443526284479804 0.0628515320644452 2.60716977458084 2.33415554310166 J3KTA1 NotFound J3KTA1.T419.p_NotFound J3KTA1_T419t _1_1_419_419 J3KTA1 J3KTA1|Q96IG2|Q96IG2-2 F-box and leucine-rich repeat protein 20, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17755.17966.3 18.47 18.47 8.235 4 1 1 0 716.7007 2068.1177 T419t TMT10 411 (K) VHAYFAPVtPPPSVGGSR (Q) VHAY(0.0)FAPVT(0.99)PPPS(0.0)VGGS(0.0)R t:Phosphorylated T FBXL20 50400.3 3 3 4435.1 31.45 HUMAN 1 13.5308 12.0168 HAYLQGNTQVSRKKL-p Q86TP1;T344-p HAYLQGNTQVSRKKL 0.979213683234262 0.830174514611827 0.011 -0.034 0.179298023316826 1.1302779924401 0.011 -0.034 0.959555717830228 0.770854125016401 0.0531023128456561 -0.306214721632573 Q86TP1 PRUNE Q86TP1.T344.p_PRUNE Q86TP1_T344tS347s_2_2_344_347 Q86TP1 Q86TP1|Q86TP1-2|Q86TP1-3|Q86TP1-4|Q86TP1-7|Q86TP1-5|Q86TP1-6 Exopolyphosphatase PRUNE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10932.10932.4 7.11 7.11 7.111 7 2 2 0 810.9098 3078.6849 N335n N343n T344t S347s TMT10 326 (K) LTPASSTHPnLHAYLQGntQVsRK (K) LT(0.0)PAS(0.0)S(0.0)T(0.0)HPN(1.0)LHAY(0.0)LQGN(1.0)T(0.99)QVS(0.99)RK K:TMT10,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S PRUNE1 50826.3 1 4 3186.1 58.23 HUMAN 1 0.1793 -1.1303 HCARVLDSPSRLDEE-p E7EVB6;S394-p HCARVLDSPSRLDEE 0.573241949626809 0.0321231090575653 0.0813333333333333 -0.281333333333333 4.44771191082834 20.1477982798525 0.0813333333333334 -0.281333333333333 0.359111083207041 0.00966540756944514 1.00179968037701 -3.90705098046785 E7EVB6 DTNB E7EVB6.S394.p_DTNB E7EVB6_S394s _1_1_394_394 E7EVB6 O60941|E7EVB6|O60941-7|O60941-4|O60941-3 Dystrobrevin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9377.9377.4 16.65 16.65 5.029 2 1 1 0 466.2305 1781.9343 S394s TMT10 391 (R) VLDsPSRLDEEHR (L) VLDS(0.99)PS(0.0)RLDEEHR s:Phosphorylated S DTNB 71367.3 3 3 792.3 224.62 HUMAN 1 4.4477 -20.1478 HCETCKMTLNMKNYK-p Q14847-2;T38-p HCETCKMTLNMKNYK 0.695496397715979 0.00758180013463581 -0.0556666666666667 0.567666666666667 2.96127553482306 30.2868783120952 -0.0556666666666667 0.567666666666667 0.505676121724837 0.000936078280963738 -0.712535889195287 6.50943600500763 Q14847 LASP1 Q14847.2.T38.p_LASP1 Q14847-2_T38t _1_1_38_38 Q14847-2 Q14847-2|F6S2S5|K7ESD6 Isoform 2 of LIM and SH3 domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15623.15623.5 17.45 17.45 5.404 2 1 1 0 540.4604 2618.2989 T38t TMT10 28 (K) ACFHCETCKMtLNMK (N) ACFHCET(0.0)CKMT(0.99)LNMK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T LASP1 36812.2 3 1 1322.1 154.29 HUMAN 1 -2.9613 30.2869 HCGRPPESPVNYGSP-p Q8WWQ0;S136-p HCGRPPESPVNYGSP 0.856682582968961 0.0124943875935368 0.0356666666666667 0.391333333333333 1.30784470266603 26.5598152477093 0.0356666666666667 0.391333333333333 0.739972414167348 0.00220809866527598 0.34941001013358 5.44263851360378 Q8WWQ0 PHIP Q8WWQ0.S136.p_PHIP Q8WWQ0_S136sS142s_2_2_136_142 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27996.27996.4 20.15 20.15 1.37 7 2 2 0 929.1917 3553.8059 S136s S142s TMT10 122 (K) GSALAALHCGRPPEsPVNYGsPPSIADTLFSR (K) GS(0.0)ALAALHCGRPPES(0.99)PVNY(0.0)GS(0.99)PPS(0.0)IADT(0.0)LFS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PHIP 208454.1 2 27 108.1 577.05 HUMAN 1 1.3078 26.5598 HCGYTQLSPFSEDSA-p Q70EL1;S603-p HCGYTQLSPFSEDSA 0.0684521497222417 0.00822268881443263 -0.379666666666667 -0.593333333333333 25.092206755849 29.6644726071756 -0.379091811095564 -0.593333333333333 0.00309584582495977 0.00108032080349427 -5.06716788509158 -6.32081297522195 Q70EL1 USP54 Q70EL1.S603.p_USP54 Q70EL1_S603s _1_1_603_603 Q70EL1 Q70EL1|Q70EL1-7|Q70EL1-6 Inactive ubiquitin carboxyl-terminal hydrolase 54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14705.14705.3 15.02 15.02 2.938 5 1 1 0 789.037 2285.1273 S603s TMT10 596 (K) HCGYTQLsPFSEDSAK (E) HCGY(0.0)T(0.0)QLS(0.99)PFS(0.0)EDS(0.0)AK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S USP54 189724.2 1 5 525.1 282.54 HUMAN 1 -25.0922 -29.6645 HCKAGDESPDVLEEL-p Q6ZSB9;S592-p HCKAGDESPDVLEEL 0.274481083437932 0.00506621849553875 0.17 0.591333333333333 10.6229067765158 33.4421973689709 0.17 0.591333333333333 0.0866381803627109 0.000452668488489812 2.09016960810822 7.53795603078994 Q6ZSB9 ZBTB49 Q6ZSB9.S592.p_ZBTB49 Q6ZSB9_S592s _1_1_592_592 Q6ZSB9 Q6ZSB9|Q6ZSB9-2 Zinc finger and BTB domain-containing protein 49 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.37149.37149.3 25.07 23.73 13.073 4 1 1 0 1005.1558 2933.4879 S592s TMT10 588 (K) AGDEsPDVLEELSQAIETSDLEK (S) AGDES(0.99)PDVLEELS(0.0)QAIET(0.0)S(0.0)DLEK K:TMT10,s:Phosphorylated S ZBTB49 86942.7 4 1 4917.1 25.07 HUMAN 1 10.6229 33.4422 HCKDHTVSGDEDYCP-p Q9UIG0;S947-p HCKDHTVSGDEDYCP 0.578155409090356 0.113538507795811 -0.078 -0.284 4.37731113813602 12.4612183606195 -0.078 -0.284 0.364979848173676 0.0567385409967997 -0.988600168185913 -2.41316039228484 Q9UIG0 BAZ1B Q9UIG0.S947.p_BAZ1B Q9UIG0_S947s _1_1_947_947 Q9UIG0 Q9UIG0|Q9UIG0-2 Tyrosine-protein kinase BAZ1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6236.6236.2 16.75 16.75 2.672 3 1 1 0 930.3775 1779.7805 S947s TMT10 943 (K) DHTVsGDEDYCPR (S) DHT(0.0)VS(0.99)GDEDY(0.0)CPR C:Carbamidomethylation,s:Phosphorylated S BAZ1B 172497.3 2 9 370.1 339.44 HUMAN 1 -4.3773 -12.4612 HCKLCECSFNDPNAK-p Q96KR1;S590-p HCKLCECSFNDPNAK 0.43606840550564 0.455281109766311 0.239666666666667 -0.0726666666666667 6.63554402263854 4.55589624982404 0.239666666666667 -0.0726666666666667 0.216992936851395 0.350275994683498 1.39705384687322 -1.02181498208876 Q96KR1 ZFR Q96KR1.S590.p_ZFR Q96KR1_S590s _1_1_590_590 Q96KR1 Q96KR1 Zinc finger RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15089.15089.3 7.7 7.7 99 1 1 1 0 664.9707 1912.9297 S590s TMT10 586 (K) LCECsFNDPNAK (E) LCECS(1.0)FNDPNAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZFR 118151.1 1 4 1692.1 120.73 HUMAN 1 6.6355 -4.5559 HCLRLGESFEKRPRA-p Q96JC9;S21-p HCLRLGESFEKRPRA 0.129513919822637 0.0195717911533627 -0.281666666666667 -0.557333333333333 18.3892414404315 23.4543860312571 -0.281666666666667 -0.557333333333333 0.0144902492508492 0.0045139983591467 -3.54147304210407 -4.65732296443818 Q96JC9 EAF1 Q96JC9.S21.p_EAF1 Q96JC9_S21s _1_1_21_21 Q96JC9 Q96JC9|B4DWJ3|Q96CJ1|F8WCI9|F8WFA5|F8WF04 ELL-associated factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16522.16522.2 7.6 2.23 99 1 1 1 0 674.3523 1267.7298 S21s TMT10 18 (R) LGEsFEK (R) LGES(1.0)FEK K:TMT10,s:Phosphorylated S EAF1 29212.6 2 3 2357.1 86.81 HUMAN 1 -18.3892 -23.4544 HCNKCLESPVGKRKR-p P48729-2;S156-p HCNKCLESPVGKRKR 0.532600177749201 0.0131138767808349 -0.0916666666666667 -0.485 5.06386543315812 26.217288415041 -0.0916666666666667 -0.485 0.311611485492826 0.00238930261544365 -1.11574901459197 -5.35172605582185 P48729 CSNK1A1 P48729.2.S156.p_CSNK1A1 P48729-2_S156s _1_1_156_156 P48729-2 P48729-2|E7ETM0 Isoform 2 of Casein kinase I isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12401.12401.2 11.31 6.09 99 1 1 1 0 714.3721 1347.7706 S156s TMT10 153 (K) CLEsPVGK (R) CLES(1.0)PVGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CSNK1A1 42221.8 3 4 1498.2 136.39 HUMAN 1 -5.0639 -26.2173 HDDDLLSSSEEECKD-p P50402;S142-p HDDDLLSSSEEECKD 0.651183474642633 0.995186789721184 -0.0673333333333333 0.000666666666666686 3.49453593562948 0.0284458584688567 -0.0673333333333333 0.000666666666666691 0.447245939597615 0.993471502878039 -0.819186392083273 0.00856632356377945 P50402 EMD P50402.S142.p_EMD P50402_S141sS142s_2_2_141_142 P50402 P50402|Q5HY57 Emerin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18191.18191.4 12.21 12.21 1.415 6 2 2 0 1080.7223 4159.9304 S141s S142s TMT10 119 (R) QSVTSFPDADAFHHQVHDDDLLssSEEECKDR (E) QS(0.0)VT(0.0)S(0.0)FPDADAFHHQVHDDDLLS(0.99)S(0.99)S(0.0)EEECKDR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EMD 29050.4 5 12 483.1 297.25 HUMAN 2 -3.4945 0.0284 HDDQEDISPSLAEQQ-p Q9HCL2;S668-p HDDQEDISPSLAEQQ 0.120014369208718 0.0717491520501734 -0.324666666666667 -0.220666666666667 19.1425118717581 15.2076958268252 -0.324666666666667 -0.220666666666667 0.0121828476375856 0.0301460501518395 -3.69729281570512 -2.91556130303625 Q9HCL2 GPAM Q9HCL2.S668.p_GPAM Q9HCL2_S668s _1_1_668_668 Q9HCL2 Q9HCL2|Q5VW52 Glycerol-3-phosphate acyltransferase 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32850.32850.4 23.01 23.01 1.146 4 1 1 0 979.2286 3833.9274 S668s TMT10 650 (K) FIQYGILTVAEHDDQEDIsPSLAEQQWDK (K) FIQY(0.0)GILT(0.0)VAEHDDQEDIS(0.99)PS(0.0)LAEQQWDK K:TMT10,s:Phosphorylated S GPAM 94820.1 1 4 2157.1 95.28 HUMAN 1 -19.1425 -15.2077 HDDVPPLSPLLPPMQ-p O14544;S311-p HDDVPPLSPLLPPMQ 0.872878371047177 0.264425494415324 0.0336666666666667 -0.124 1.15704118971375 7.61046804901439 0.0336666666666667 -0.124 0.766118378896528 0.173361715183304 0.312819561410171 -1.56703329308356 O14544 SOCS6 O14544.S311.p_SOCS6 O14544_S311s _1_1_311_311 O14544 O14544 Suppressor of cytokine signaling 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24090.24090.4 12.91 8.58 99 1 1 1 0 712.3606 2766.4558 S311s TMT10 302 (R) AGHDDVPPLsPLLPPMQNNQIQR (N) AGHDDVPPLS(1.0)PLLPPMQNNQIQR s:Phosphorylated S SOCS6 59983.4 2 3 3286.1 55.01 HUMAN 1 1.157 -7.6105 HDESPPRTPTGNAPS-p O95251;T128-p HDESPPRTPTGNAPS 0.332256356782789 0.00701753853914177 0.157333333333333 0.519 8.93707863264281 30.8577896113102 0.157333333333333 0.519 0.127729771936188 0.000820769177382354 1.79747075903884 6.68641390521263 O95251 KAT7 O95251.T128.p_KAT7 O95251_S124sT128t_2_2_124_128 O95251 O95251 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14084.14084.4 17.88 17.88 1.21 11 2 2 0 1174.2793 4533.1654 S124s T128t N132n TMT10 117 (K) NTADHDEsPPRtPTGnAPSSESDIDISSPNVSHDESIAK (D) N(0.0)T(0.0)ADHDES(0.99)PPRT(0.99)PT(0.0)GN(0.99)APS(0.0)S(0.0)ES(0.0)DIDIS(0.0)S(0.0)PN(0.0)VS(0.0)HDES(0.0)IAK K:TMT10,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated KAT7 71325.8 1 17 691.1 243.06 HUMAN 1 8.9371 30.8578 HDFLAHSSEESEETS-p P46100;S26-p HDFLAHSSEESEETS 0.0904989301263926 0.341139685401107 0.350666666666667 0.112666666666667 22.1873503031361 6.18659373111165 0.350666666666667 0.112666666666667 0.0060431722007534 0.240624933532954 4.36490351698942 1.31741381398235 P46100 ATRX P46100.S26.p_ATRX P46100_S25sS26s_2_2_25_26 P46100 P46100|P46100-4 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15980.15980.3 16.03 16.03 2.629 6 2 2 0 882.0436 2484.184 S25s S26s TMT10 18 (K) LHDFLAHssEESEETSSPPR (L) LHDFLAHS(0.99)S(0.99)EES(0.0)EET(0.0)S(0.0)S(0.0)PPR s:Phosphorylated S ATRX 285034.2 1 41 18.1 1035.36 HUMAN 1 22.1874 6.1866 HDGADETSEKEQQEA-p Q01105-2;S24-p HDGADETSEKEQQEA 0.996778181743058 0.0822101506802639 0.00066666666666666 0.204 0.0243277623800631 14.3778608062099 0.000666666666666663 0.204 0.994413985822645 0.0364933657148142 0.00733029092302549 2.76085164201373 Q01105 SET Q01105.2.S24.p_SET Q01105-2_S24s _1_1_24_24 Q01105-2 Q01105-2 Isoform 2 of Protein SET HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6596.6596.3 12.81 12.81 1.322 3 1 1 0 728.6674 2104.0195 S24s TMT10 12 (K) ELNSNHDGADETsEK (E) ELNS(0.0)NHDGADET(0.0)S(0.99)EK K:TMT10,s:Phosphorylated S SET 32102.4 4 4 1479.1 138.77 HUMAN 1 0.0243 14.3779 HDHQLESSLSPVEVF-p Q9H410;S28-p HDHQLESSLSPVEVF 0.658549271083176 0.193157655351418 0.0663333333333333 -0.142333333333333 3.40396323938544 9.38941414266993 0.0663333333333334 -0.142333333333333 0.456671255101578 0.115095564081802 0.801332545460228 -1.87508955292901 Q9H410 DSN1 Q9H410.S28.p_DSN1 Q9H410_S28sS30s_2_2_28_30 Q9H410 Q9H410|Q9H410-4 Kinetochore-associated protein DSN1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21051.21051.3 18.85 18.85 1.122 4 2 2 0 881.4279 2482.3342 S28s S30s TMT10 20 (K) THDHQLESsLsPVEVFAK (T) T(0.0)HDHQLES(0.0)S(0.99)LS(0.99)PVEVFAK K:TMT10,s:Phosphorylated S DSN1 40408.8 2 9 1406.1 145.92 HUMAN 1 3.404 -9.3894 HDHTGFLTEYVATRW-p P28482;T185-p HDHTGFLTEYVATRW 0.0739615399485653 0.00195162346428314 -0.868666666666667 -1.39666666666667 24.2767701608051 42.4025975326812 -0.868666666666667 -1.39666666666667 0.00373527846421439 5.75095867312216e-05 -4.8629062975364 -11.2666395474921 P28482 MAPK1 P28482.T185.p_MAPK1 P28482_T185tY187y_2_2_185_187 P28482 P28482|P28482-2 Mitogen-activated protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17727.17727.4 23.69 23.69 3.238 4 2 2 0 634.0305 2373.1673 T185t Y187y TMT10 173 (R) VADPDHDHTGFLtEyVATR (W) VADPDHDHT(0.0)GFLT(0.99)EY(0.99)VAT(0.0)R t:Phosphorylated T,y:Phosphorylated Y MAPK1 41788.3 2 4 3319.1 54 HUMAN 1 -24.2768 -42.4026 HDLIQKLSPRTSNVR-p Q9BPY3;S112-p HDLIQKLSPRTSNVR 0.36371578203964 0.868104803303652 0.152666666666667 0.0256666666666667 8.15347658215479 0.864821920909809 0.152666666666667 0.0256666666666667 0.152986229728507 0.819441223044381 1.66177467674219 0.239594839015004 Q9BPY3 FAM118B Q9BPY3.S112.p_FAM118B Q9BPY3_S112s _1_1_112_112 Q9BPY3 Q9BPY3|J3KP39 Protein FAM118B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24627.24627.4 20.54 20.54 99 1 1 1 0 595.3427 2298.381 S112s TMT10 99 (K) NLVHVAHDLIQKLsPR (T) NLVHVAHDLIQKLS(1.0)PR K:TMT10,s:Phosphorylated S FAM118B 39783.6 1 3 3100.1 60.68 HUMAN 1 8.1535 0.8648 HDLKFSASIEKERDF-p Q9BYW2;S344-p HDLKFSASIEKERDF 0.092306798909453 0.0197428993849185 -0.560333333333333 -0.350333333333333 22.0376742240696 23.3911712928256 -0.560333333333334 -0.350333333333333 0.00625507580982775 0.00458018342444264 -4.33054975020879 -4.6421996581868 Q9BYW2 SETD2 Q9BYW2.S344.p_SETD2 Q9BYW2_S344s _1_1_344_344 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16932.16932.2 9.96 1.72 2.48 2 1 1 0 660.3545 1239.7349 S344s TMT10 341 (K) FSAsIEK (E) FS(0.0)AS(0.99)IEK K:TMT10,s:Phosphorylated S SETD2 290615.4 1 3 58.1 711.11 HUMAN 1 -22.0377 -23.3912 HDLKRCQYVTEKVLA-p P04075-2;Y258-p HDLKRCQYVTEKVLA 0.373195143267854 0.177689857798884 -0.35 0.187333333333333 7.93913582294017 9.86935698086576 -0.35 0.187333333333333 0.160726104062179 0.103053869135156 -1.62460049038736 1.95824172741487 P04075 ALDOA P04075.2.Y258.p_ALDOA P04075-2_Y258y _1_1_258_258 P04075-2 P04075-2|J3KPS3|P09972|H3BQN4|P00883 Isoform 2 of Fructose-bisphosphate aldolase A GG20160819_MSz_CCLE_T4D7_pY_Injection_02.6524.6596.2 14.24 14.24 14.237 2 1 1 0 618.7804 1156.587 Y258y Hydrogen 256 (R) CQyVTEK (V) CQY(0.99)VT(0.0)EK C:Carbamidomethylation,K:TMT10-Lys-Only,y:Phosphorylated Y ALDOA 45716.3 6 1 107.1 27.69 HUMAN 1 -7.9391 9.8694 HDMKPLDSPGRRKRD-p Q15643;S1891-p HDMKPLDSPGRRKRD 0.556318909489347 0.0634338329524131 -0.081 -0.228666666666667 4.70242190310165 15.9469826932048 -0.081 -0.228666666666667 0.338655247698804 0.0254273868657723 -1.04923189453393 -3.05586661024565 Q15643 TRIP11 Q15643.S1891.p_TRIP11 Q15643_S1891s _1_1_1891_1891 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11971.11971.4 19.57 19.57 12.895 2 1 1 0 562.3032 2166.2218 S1891s TMT10 1881 (K) LSVHDMKPLDsPGRR (K) LS(0.0)VHDMKPLDS(0.99)PGRR K:TMT10,s:Phosphorylated S TRIP11 228267 19 17 463.1 303.86 HUMAN 1 -4.7024 -15.947 HDPMAPVSPEYWSKI-p Q9BZ95;S1415-p HDPMAPVSPEYWSKI 0.178102411142301 0.636536526345051 0.224666666666667 0.0613333333333333 14.8107404785954 2.67048084902122 0.224666666666667 0.0613333333333334 0.0330313217337102 0.540694454169081 2.84303018676594 0.652563988345161 Q9BZ95 WHSC1L1 Q9BZ95.S1415.p_WHSC1L1 Q9BZ95_S1415s _1_1_1415_1415 Q9BZ95 Q9BZ95|Q9BZ95-5|Q9BZ95-2|Q9BZ95-4 Histone-lysine N-methyltransferase NSD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22316.22316.3 11.23 11.23 3.797 4 1 1 0 944.4315 2751.2981 S1415s TMT10 1403 (R) LCCSEHDPMAPVsPEYWSK (I) LCCS(0.0)EHDPMAPVS(0.99)PEY(0.0)WS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NSD3 165432.8 1 9 1351.1 150.85 HUMAN 1 14.8107 2.6705 HDRRRSQSIEQESQE-p Q5VTL8;S529-p HDRRRSQSIEQESQE 0.239620364697153 0.0158937585718202 0.174333333333333 0.387 11.8608706036654 24.8569423178277 0.174333333333333 0.387 0.0651497779182422 0.00326817849695632 2.30768098228671 5.00143975819584 Q5VTL8 PRPF38B Q5VTL8.S529.p_PRPF38B Q5VTL8_S529s _1_1_529_529 Q5VTL8 Q5VTL8|A0A0A0MRN0 Pre-mRNA-splicing factor 38B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8512.9008.2 15.6 15.6 2.986 3 1 1 0 915.9477 1750.9223 S529s TMT10 527 (R) SQsIEQESQEK (Q) S(0.0)QS(0.99)IEQES(0.0)QEK K:TMT10,s:Phosphorylated S PRPF38B 64695 6 4 2128.1 96.59 HUMAN 1 11.8609 24.8569 HDRVGRLSPCVPAKP-p Q15742;S479-p HDRVGRLSPCVPAKP 0.393895312924686 0.0640163648681066 0.139333333333333 0.225 7.46563328451752 15.8904848601841 0.139333333333333 0.225 0.179240716602087 0.0257603354436294 1.54229852491026 3.04505695810338 Q15742 NAB2 Q15742.S479.p_NAB2 Q15742_S479s _1_1_479_479 Q15742 Q15742 NGFI-A-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25159.25159.5 24.99 24.99 99 1 1 1 0 880.459 4318.279 S479s Hydrogen 475 (R) VGRLsPCVPAKPPLAEFEEGLLDRCPAPGPHPALVEGR (R) VGRLS(1.0)PCVPAKPPLAEFEEGLLDRCPAPGPHPALVEGR C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S NAB2 56878.4 2 7 983.1 192.11 HUMAN 1 7.4656 15.8905 HDSERAVSADPLPPP-p Q8N4S9;S42-p HDSERAVSADPLPPP 0.223866185094493 0.394486665503224 0.208 0.0893333333333334 12.4883074290146 5.36929895986152 0.208 0.0893333333333334 0.0563857364504396 0.290449146096565 2.4192583893411 1.17107235153962 Q8N4S9 MARVELD2 Q8N4S9.S42.p_MARVELD2 Q8N4S9_S42s _1_1_42_42 Q8N4S9 Q8N4S9|Q8N4S9-3|Q8N4S9-2|A1BQX2|A0A0G2JQ38 MARVEL domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.33428.33428.4 28.41 24.06 26.993 5 1 1 0 1176.605 4623.4336 S42s Hydrogen 40 (R) AVsADPLPPPPLPLQPPFGPDFYSSDTEEPAIAPDLKPVRR (F) AVS(0.99)ADPLPPPPLPLQPPFGPDFY(0.0)S(0.0)S(0.0)DT(0.0)EEPAIAPDLKPVRR K:TMT10-Lys-Only,s:Phosphorylated S MARVELD2 64623.4 5 1 1043.1 184.85 HUMAN 1 12.4883 5.3693 HDSIKDDSEDLKPVI-p Q05513;S228-p HDSIKDDSEDLKPVI 0.36046797615324 0.17911676536607 -0.204 0.136333333333333 8.23923227122164 9.8218549444342 -0.204 0.136333333333333 0.14999499673487 0.104187233323133 -1.67663751067629 1.95000376944626 Q05513 PRKCZ Q05513.S228.p_PRKCZ Q05513_S223sS228s_2_2_223_228 Q05513 Q05513|Q05513-3|Q05513-2|E9PBE1 Protein kinase C zeta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21077.21077.5 13.76 13.76 99 2 2 2 0 773.0087 3701.0804 S223s S228s TMT10 220 (R) KHDsIKDDsEDLKPVIDGMDGIK (I) KHDS(1.0)IKDDS(1.0)EDLKPVIDGMDGIK K:TMT10,s:Phosphorylated S PRKCZ 68571.6 1 6 859.1 210.7 HUMAN 1 -8.2392 9.8219 HDSIQPRSVDNRPQA-p Q9Y6D6;S1580-p HDSIQPRSVDNRPQA 0.662713083331263 0.0978164211790566 0.0673333333333333 -0.195666666666667 3.34491280345363 13.3486914328197 0.0673333333333333 -0.195666666666667 0.462922958134234 0.0462520361827975 0.789638083952227 -2.57263620172672 Q9Y6D6 ARFGEF1 Q9Y6D6.S1580.p_ARFGEF1 Q9Y6D6_S1580s _1_1_1580_1580 Q9Y6D6 Q9Y6D6 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17306.17306.4 19.69 19.69 5.293 4 1 1 0 709.6218 2755.499 S1580s TMT10 1580 (R) sVDNRPQAPLVSASAVNEEVSK (I) S(0.99)VDNRPQAPLVS(0.0)AS(0.0)AVNEEVS(0.0)K K:TMT10,s:Phosphorylated S ARFGEF1 210988.4 2 15 381.1 335.01 HUMAN 1 3.3449 -13.3487 HDVKTPNTETRTSCL-p Q8WWK9;T582-p HDVKTPNTETRTSCL 0.953014691362228 0.114624959020381 -0.00900000000000001 -0.262 0.411915752247054 12.4079394760821 -0.00900000000000002 -0.262 0.909511981790642 0.0574388918208998 -0.119074642931039 -2.40366016980792 Q8WWK9 CKAP2 Q8WWK9.T582.p_CKAP2 Q8WWK9_T579tT582t_2_2_579_582 Q8WWK9 Q8WWK9|Q8WWK9-5|Q8WWK9-6 Cytoskeleton-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6688.6688.5 10.85 10.85 1.113 5 2 2 0 538.2751 2527.4083 T579t T582t TMT10 570 (K) TKDPTHDVKtPNtETR (T) T(0.0)KDPT(0.0)HDVKT(0.99)PNT(0.99)ET(0.0)R K:TMT10,t:Phosphorylated T CKAP2 77555.9 4 6 2323.1 87.85 HUMAN 1 -0.4119 -12.4079 HDYDSVASDEDTDQE-p Q9Y2X7;S388-p HDYDSVASDEDTDQE 0.274481083437932 0.0312577537776141 0.182 0.306666666666667 10.6240505033144 20.3316972703216 0.182 0.306666666666667 0.0866153669570446 0.00926467678919916 2.09036924915501 3.94672900019411 Q9Y2X7 GIT1 Q9Y2X7.S388.p_GIT1 Q9Y2X7_S388s _1_1_388_388 Q9Y2X7 Q9Y2X7-3|A0A0C4DGN6|J3QRU8 ARF GTPase-activating protein GIT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12587.12587.3 28.55 28.55 1.207 6 1 1 0 1097.1193 3209.3828 S388s TMT10 373 (R) SQSDLDDQHDYDSVAsDEDTDQEPLR (S) S(0.0)QS(0.0)DLDDQHDY(0.0)DS(0.0)VAS(0.99)DEDT(0.0)DQEPLR s:Phosphorylated S GIT1 85081.2 3 24 474.2 301.74 HUMAN 1 10.6241 20.3317 HEAEVLLSPKKVMAR-p A0A0U1RR07;S1041-p HEAEVLLSPKKVMAR 0.125813604638611 0.00172752646433129 -0.266333333333333 -1.07766666666667 18.6940459017154 43.7731974578111 -0.266333333333333 -1.07766666666667 0.0135081355447498 4.19450053589754e-05 -3.60411429432337 -11.9659979235154 A0A0U1RR07 NotFound A0A0U1RR07.S1041.p_NotFound A0A0U1RR07_S1041s _1_1_1041_1041 A0A0U1RR07 A0A0U1RR07|Q9HCH5-8|Q9HCH5-7|Q9HCH5-11 Synaptotagmin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13303.13303.4 10.89 10.89 10.886 2 1 1 0 559.0696 2153.2897 S1041s TMT10 1032 (K) NTHEAEVLLsPKK (V) NT(0.0)HEAEVLLS(0.99)PKK K:TMT10,s:Phosphorylated S SYTL2 248167.3 1 4 1920.1 107.01 HUMAN 1 -18.694 -43.7732 HECQHHHSKNKKHSK-p O75400;S809-p HECQHHHSKNKKHSK 0.264646088491939 0.0788420855652697 -0.256 0.372666666666667 10.9513708538411 14.6451875890863 -0.256 0.372666666666667 0.0803272528578546 0.0343147817555226 -2.14759207393396 2.81038598305259 O75400 PRPF40A O75400.S809.p_PRPF40A O75400_S809s _1_1_809_809 O75400 O75400 Pre-mRNA-processing factor 40 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12208.12208.5 13.84 13.84 99 1 1 1 0 522.6442 2529.228 S809s TMT10 795 (K) DFMHVLEHECQHHHsK (N) DFMHVLEHECQHHHS(1.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRPF40A 109088.4 1 8 718.2 237.38 HUMAN 1 -10.9514 14.6452 HECSLPVSPLGSIAT-p Q96MT8-2;S495-p HECSLPVSPLGSIAT 0.839442217239864 0.138123156165408 0.0336666666666667 0.199 1.46810394575901 11.3264893658667 0.0336666666666666 0.199 0.713164317318629 0.0736802453588662 0.387499155757253 2.21237769213379 Q96MT8 CEP63 Q96MT8.2.S495.p_CEP63 Q96MT8-2_S491sS495s_2_2_491_495 Q96MT8-2 Q96MT8-2|Q96MT8-3 Isoform 2 of Centrosomal protein of 63 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30412.30412.3 15.91 15.91 2.747 4 2 2 0 880.1001 2478.3588 S491s S495s TMT10 483 (K) LELGLHECsLPVsPLGSIATR (F) LELGLHECS(0.99)LPVS(0.99)PLGS(0.0)IAT(0.0)R C:Carbamidomethylation,s:Phosphorylated S CEP63 63412.8 2 2 4509.1 30.5 HUMAN 1 1.4681 11.3265 HEDICEDSDIDGDYR-p O00629;S60-p HEDICEDSDIDGDYR 0.676823734876953 0.187033681479382 0.0563333333333333 0.192666666666667 3.17419464963487 9.57691284981106 0.0563333333333333 0.192666666666667 0.481482531252714 0.110232260897707 0.755576471835662 1.90755505244705 O00629 KPNA4 O00629.S60.p_KPNA4 O00629_S60s_1_1_60_60 O00629 O00629 Importin subunit alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26035.26035.4 30.13 30.13 2.285 7 1 1 0 1363.8877 5371.557 S60s N79n TMT10 50 (R) NVPHEDICEDsDIDGDYRVQNTSLEAIVQnASSDNQGIQLSAVQAAR (K) N(0.0)VPHEDICEDS(0.99)DIDGDY(0.0)RVQN(0.0)T(0.0)S(0.0)LEAIVQN(0.99)AS(0.0)S(0.0)DN(0.0)QGIQLS(0.0)AVQAAR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated KPNA4 58399.2 8 1 2915.1 66.06 HUMAN 1 3.1742 9.5769 HEDLKMGSDGESDQA-p Q00536-2;S152-p HEDLKMGSDGESDQA 0.98230168117951 0.0519260893065422 -0.00466666666666668 0.247 0.15449040916117 17.1441511717121 -0.0046666666666667 0.247 0.965052542137493 0.019301225416537 -0.0458786486984486 3.28854829345576 Q00536 CDK16 Q00536.2.S152.p_CDK16 Q00536-2_S152s _1_1_152_152 Q00536-2 Q00536-2|Q00536-3|A0A087WZU2 Isoform 2 of Cyclin-dependent kinase 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12158.12158.3 20.41 20.41 2.675 7 1 1 0 883.7106 2569.1521 S152s TMT10 150 (K) MGsDGESDQASATSSDEVQSPVR (V) MGS(0.99)DGES(0.0)DQAS(0.0)AT(0.0)S(0.0)S(0.0)DEVQS(0.0)PVR s:Phosphorylated S CDK16 63855.9 1 2 672.1 248.68 HUMAN 1 -0.1545 17.1442 HEDPGNVSYSEIGGL-p A0A087X2I1;S145-p HEDPGNVSYSEIGGL 0.880959558381171 0.901928595146833 0.022 -0.013 1.08290757800535 0.624594751308485 0.022 -0.013 0.779308193223035 0.866045131958171 0.294547550095964 -0.176849398225016 A0A087X2I1 PSMC6 A0A087X2I1.S145.p_PSMC6 A0A087X2I1_S145s _1_1_145_145 A0A087X2I1 A0A087X2I1|P62333 26S proteasome regulatory subunit 10B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27434.27434.3 28.31 22.44 1.107 6 1 1 0 1215.2335 3563.7162 S145s TMT10 128 (R) EVDPLVYNMSHEDPGNVsYSEIGGLSEQIR (E) EVDPLVY(0.0)NMS(0.0)HEDPGNVS(0.99)Y(0.0)S(0.0)EIGGLS(0.0)EQIR s:Phosphorylated S PSMC6 46081.5 3 1 4655.1 28.31 HUMAN 1 1.0829 -0.6246 HEEDMDMSD______-p Q05519-2;S482-p HEEDMDMSD______ 0.401796102098674 0.0263581786161247 0.112666666666667 0.314 7.30953697366774 21.4471545693295 0.112666666666667 0.314 0.18580025368718 0.00716612770106114 1.51509461196289 4.19234931307825 Q05519 SRSF11 Q05519.2.S482.p_SRSF11 Q05519-2_S482s _1_1_482_482 Q05519-2 Q05519|Q05519-2|Q5T757 Isoform 2 of Serine/arginine-rich splicing factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8852.8852.4 26.74 26.74 26.738 4 1 1 0 829.3549 3234.4316 S482s TMT10 459 (K) GTGDSLRESKVNGDDHHEEDMDMsD (-) GT(0.0)GDS(0.0)LRES(0.0)KVNGDDHHEEDMDMS(0.99)D K:TMT10,s:Phosphorylated S SRSF11 53527.2 54 13 185.1 475.04 HUMAN 1 7.3095 21.4472 HEFIRSESENWRIFR-p Q6Y7W6-5;S201-p HEFIRSESENWRIFR 0.97076436181379 0.892932419775341 0.00566666666666665 0.0136666666666667 0.254665864538867 0.689894321804229 0.00566666666666665 0.0136666666666667 0.943047164391347 0.853120873014422 0.0748186078666661 0.194155893091816 Q6Y7W6 GIGYF2 Q6Y7W6.5.S201.p_GIGYF2 Q6Y7W6-5_S201s _1_1_201_201 Q6Y7W6-5 I1E4Y6|Q6Y7W6-3|Q6Y7W6-5|Q6Y7W6-4 Isoform 4 of GRB10-interacting GYF protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8946.8946.4 12.44 12.44 1.396 2 1 1 0 564.7895 2176.1664 S201s TMT10 193 (R) KHEFIRSEsENWR (I) KHEFIRS(0.0)ES(0.99)ENWR K:TMT10,s:Phosphorylated S GIGYF2 149826.1 2 6 470.1 302.35 HUMAN 1 0.2547 0.6899 HEGGLRGSSRLLSFS-p Q5JSZ5;S161-p HEGGLRGSSRLLSFS 0.0425646712541339 0.00265649453361622 0.511666666666667 -0.721666666666667 30.6213942579881 39.1560841471169 0.511666666666667 -0.721666666666667 0.000866683591193155 0.000121448340615564 6.6234347290503 -9.75818165142817 Q5JSZ5 PRRC2B Q5JSZ5.S161.p_PRRC2B Q5JSZ5_S161s _1_1_161_161 Q5JSZ5 Q5JSZ5|Q5JSZ5-5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11755.11755.4 12 7.77 1.209 3 1 1 0 683.611 2651.453 S161s TMT10 143 (K) SWAQLNGKPVGHEGGLRGsSR (L) S(0.0)WAQLNGKPVGHEGGLRGS(0.99)S(0.0)R K:TMT10,s:Phosphorylated S PRRC2B 244103.4 1 48 36.2 882.05 HUMAN 1 30.6214 -39.1561 HEKDKDKSRDSLAPG-p O15013;S1229-p HEKDKDKSRDSLAPG 0.325306077824017 0.00413791477536262 -0.273333333333333 0.734333333333333 9.13417608094823 35.0788132093632 -0.273333333333333 0.734333333333334 0.122062536895572 0.000310540808284198 -1.83159199915167 8.12327281169483 O15013 ARHGEF10 O15013.S1229.p_ARHGEF10 O15013_S1229sS1232s_2_2_1229_1232 O15013 O15013|O15013-6|O15013-5|O15013-4|O15013-7 Rho guanine nucleotide exchange factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9789.9789.4 7.68 7.56 99 2 2 2 0 858.6794 3271.7576 S1229s S1232s TMT10 1225 (K) DKDKsRDsLAPGPEPQDEDQK (D) DKDKS(1.0)RDS(1.0)LAPGPEPQDEDQK K:TMT10,s:Phosphorylated S ARHGEF10 152807 1 5 2315.1 88.25 HUMAN 1 -9.1342 35.0788 HEKNGWYTPPKEDG_-p Q7Z7E8;T416-p HEKNGWYTPPKEDG_ 0.353013338583127 0.118937673259271 0.129 -0.216 8.39783079366915 12.194125535189 0.129 -0.216 0.144616191675719 0.0603375187078325 1.70411322693721 -2.36561221510469 Q7Z7E8 UBE2Q1 Q7Z7E8.T416.p_UBE2Q1 Q7Z7E8_T416t_1_1_416_416 Q7Z7E8 Q7Z7E8|Q7Z7E8-2 Ubiquitin-conjugating enzyme E2 Q1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18152.18152.4 16.39 16.39 5.042 3 1 1 0 742.3907 2885.5765 N412n T416t TMT10 404 (K) SLVQIHEKnGWYtPPKEDG (-) S(0.0)LVQIHEKN(1.0)GWY(0.0)T(0.99)PPKEDG K:TMT10,n:Deamidated,t:Phosphorylated T UBE2Q1 46525.4 3 1 4476.1 30.92 HUMAN 1 8.3978 -12.1941 HELQANCYEEVKDRC-p E9PK25;Y178-p HELQANCYEEVKDRC 0.295125154480667 0.111733867000766 -0.315666666666667 0.185666666666667 9.98921903890175 12.5638392853384 -0.315666666666667 0.185666666666667 0.100248549175728 0.0554135624889978 -1.97983748812065 2.43148116136585 E9PK25 NotFound E9PK25.Y178.p_NotFound E9PK25_Y178y _1_1_178_178 E9PK25 E9PK25|P23528|G3V1A4 Cofilin-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11129.11169.3 25.03 25.03 99 1 1 1 0 686.6645 1978.0104 Y178y TMT10 171 (K) HELQANCyEEVK (D) HELQANCY(1.0)EEVK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y CFL1 22956 11 2 15.1 88.04 HUMAN 1 -9.9892 12.5638 HENMSQLSEEEQNKD-p A0A087X0M4;S658-p HENMSQLSEEEQNKD 0.147571881565505 0.0174864042819418 -0.784333333333333 0.461 16.8654887826275 24.2210377143946 -0.784333333333333 0.461 0.0205802725403285 0.00378352169475919 -3.23618839324755 4.84335555737079 A0A087X0M4 NotFound A0A087X0M4.S658.p_NotFound A0A087X0M4_S658s _1_1_658_658 A0A087X0M4 Q9BWU0|A0A087X0M4 Kanadaptin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9394.9394.3 23.66 23.66 2.414 4 1 1 0 900.7458 2620.2561 S658s TMT10 647 (K) ETQTHENMSQLsEEEQNK (D) ET(0.0)QT(0.0)HENMS(0.0)QLS(0.99)EEEQNK K:TMT10,s:Phosphorylated S SLC4A1AP 83630.7 3 7 455.1 307.39 HUMAN 1 -16.8655 24.221 HEPPDVVSDDEKDHG-p Q15311;S62-p HEPPDVVSDDEKDHG 0.328186833017654 0.487894706000185 0.139333333333333 0.0683333333333333 9.04721546611133 4.16453609923899 0.139333333333333 0.0683333333333334 0.124531280388149 0.383306681920658 1.81653654392828 0.948287527777659 Q15311 RALBP1 Q15311.S62.p_RALBP1 Q15311_S62s _1_1_62_62 Q15311 Q15311|A0A1W2PRI7 RalA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13538.13538.5 17.4 17.4 9.363 3 1 1 0 743.7709 3634.8592 S62s TMT10 44 (R) TGEPSPPHDILHEPPDVVsDDEKDHGK (K) T(0.0)GEPS(0.0)PPHDILHEPPDVVS(0.99)DDEKDHGK K:TMT10,s:Phosphorylated S RALBP1 76461.4 3 3 822.1 218.43 HUMAN 1 9.0472 4.1645 HEPPSPRSPRAACSD-p Q92837;S252-p HEPPSPRSPRAACSD 0.072097360428574 0.193937580113578 0.398 0.140666666666667 24.6095358611559 9.36615439844466 0.398 0.140666666666667 0.00345976351006727 0.11571364127048 4.94555914151447 1.87106348980324 Q92837 FRAT1 Q92837.S252.p_FRAT1 Q92837_S249sS252s_2_2_249_252 Q92837 Q92837 Proto-oncogene FRAT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17390.17601.5 24.92 24.92 24.918 3 2 2 0 683.9772 3255.9206 S249s S252s TMT10 229 (R) AKLPQRPLLGPLSAPVHEPPsPRsPR (A) AKLPQRPLLGPLS(0.0)APVHEPPS(0.99)PRS(0.99)PR K:TMT10,s:Phosphorylated S FRAT1 29434.8 2 3 3094.1 60.86 HUMAN 1 24.6095 9.3662 HEQASQPTPEKAQQN-p Q9Y4J8-15;T444-p HEQASQPTPEKAQQN 0.995010386084919 0.00480740028593783 0.00299999999999999 -0.699666666666667 0.0440088929763417 33.8545707835483 0.00104026509851144 -0.699666666666667 0.989917748040294 0.000411664030353257 0.0132308311809395 -7.68191120307023 Q9Y4J8 DTNA Q9Y4J8.15.T444.p_DTNA Q9Y4J8-15_T444t _1_1_444_444 Q9Y4J8-15 Q9Y4J8|Q9Y4J8-15|Q9Y4J8-14|Q9Y4J8-2|Q9Y4J8-13|Q9Y4J8-4|O60941-2|O60941-5|O60941-3|O60941-6|Q9Y4J8-5|Q9Y4J8-16|Q9Y4J8-11|Q9Y4J8-10|Q9Y4J8-6|M0QZ28|Q9Y4J8-12 Isoform 15 of Dystrobrevin alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17537.17537.5 17.36 17.36 1.824 3 1 1 0 727.9925 3555.9648 T444t TMT10 433 (R) LRLEHEQASQPtPEKAQQNPTLLAELR (L) LRLEHEQAS(0.0)QPT(0.99)PEKAQQNPT(0.0)LLAELR K:TMT10,t:Phosphorylated T DTNA 83008.6 6 16 792.1 224.62 HUMAN 1 0.044 -33.8546 HEQEAINSDPELSNC-p Q8IX90;S119-p HEQEAINSDPELSNC 0.68092845511394 0.274469370048047 -0.0966666666666667 -0.153 3.13196457926346 7.39862490797102 -0.0966666666666667 -0.153 0.486187223755829 0.182027711560434 -0.747090676716567 -1.53017846427249 Q8IX90 SKA3 Q8IX90.S119.p_SKA3 Q8IX90_S119s _1_1_119_119 Q8IX90 Q8IX90 Spindle and kinetochore-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12704.12704.4 16.71 16.34 2.406 3 1 1 0 896.9401 3504.7632 S119s TMT10 108 (K) KNSVHEQEAINsDPELSNCENFQK (T) KNS(0.0)VHEQEAINS(0.99)DPELS(0.0)NCENFQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SKA3 46872 2 2 966.1 193.88 HUMAN 1 -3.132 -7.3986 HERGSLASLDSLRKG-p O60716-3;S349-p HERGSLASLDSLRKG 0.401454832845887 0.0232251310177084 -0.124 0.306666666666667 7.31644406192605 22.3007189206661 -0.124 0.306666666666667 0.185504988878685 0.00588746187657093 -1.5162992530209 4.38631654740968 O60716 CTNND1 O60716.3.S349.p_CTNND1 O60716-3_S349s _1_1_349_349 O60716-3 O60716-14|O60716-11|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-24|O60716-25|O60716-26|O60716-28|O60716-30|O60716-27|O60716-29|O60716-31|O60716-32 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17202.17837.3 13.73 7.65 2.528 3 1 1 0 562.3186 1604.9736 S349s TMT10 345 (R) GSLAsLDSLRK (G) GS(0.0)LAS(0.99)LDS(0.0)LRK K:TMT10,s:Phosphorylated S CTNND1 105545.3 13 24 21.1 1014.17 HUMAN 1 -7.3164 22.3007 HERLFGHSSTSALSA-p Q7Z6Z7;S3116-p HERLFGHSSTSALSA 0.422217118193799 0.952285258377512 -0.124333333333333 0.00800000000000001 6.89786405676464 0.301992544711209 -0.124333333333333 0.00800000000000002 0.204274235737321 0.932826221582855 -1.44312274591408 0.0882758937042781 Q7Z6Z7 HUWE1 Q7Z6Z7.S3116.p_HUWE1 Q7Z6Z7_S3116s _1_1_3116_3116 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27593.27593.2 13.93 13.93 1.155 5 1 1 0 934.9962 1789.0169 S3116s TMT10 3112 (R) LFGHsSTSALSAILR (S) LFGHS(0.99)S(0.0)T(0.0)S(0.0)ALS(0.0)AILR s:Phosphorylated S HUWE1 485818.9 4 48 11.1 1210.45 HUMAN 1 -6.8979 0.302 HETASQTSFPDVYNE-p Q14789-2;S458-p HETASQTSFPDVYNE 0.191102046396083 0.360589069296295 0.199333333333333 0.0893333333333334 14.0425305870795 5.87790885813542 0.199333333333333 0.0893333333333334 0.0394227523013501 0.258350385659204 2.70073052319527 1.26248875105757 Q14789 GOLGB1 Q14789.2.S458.p_GOLGB1 Q14789-2_S458s _1_1_458_458 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22386.22386.4 14.16 12.07 1.11 8 1 1 0 1103.7974 4332.2036 S458s TMT10 446 (R) LPLQQHETASQTsFPDVYNEGTQAVTEENIASLQK (R) LPLQQHET(0.0)AS(0.0)QT(0.0)S(0.99)FPDVY(0.0)NEGT(0.0)QAVT(0.0)EENIAS(0.0)LQK K:TMT10,s:Phosphorylated S GOLGB1 378557.2 4 4 93.1 610.98 HUMAN 1 14.0425 5.8779 HETPRAKSPEQLRGD-p Q9UJJ9;S291-p HETPRAKSPEQLRGD 0.626617753150603 0.0282077267442366 0.0796666666666667 0.433 3.77069256924224 20.9990725953544 0.0796666666666667 0.433 0.419692050379165 0.00794497875920735 0.873035415936579 4.09264249791403 Q9UJJ9 GNPTG Q9UJJ9.S291.p_GNPTG Q9UJJ9_S291s _1_1_291_291 Q9UJJ9 Q9UJJ9 N-acetylglucosamine-1-phosphotransferase subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6603.6603.3 8.98 8.98 99 1 1 1 0 489.6095 1386.8469 S291s TMT10 289 (R) AKsPEQLR (G) AKS(1.0)PEQLR K:TMT10,s:Phosphorylated S GNPTG 34372.3 1 1 6869.1 8.98 HUMAN 1 3.7707 20.9991 HFCQHPRSPGAPCQE-p Q9NWF9-1;S776-p HFCQHPRSPGAPCQE 0.483726315617236 0.0508197960033686 0.164666666666667 0.228666666666667 5.80918515537291 17.2814830305614 0.164666666666667 0.228666666666667 0.262471095834343 0.0187004344812508 1.25049590608504 3.3157035451448 Q9NWF9 RNF216 Q9NWF9.1.S776.p_RNF216 Q9NWF9-1_S776s _1_1_776_776 Q9NWF9-1 Q9NWF9-1|Q9NWF9-3 Isoform 2 of E3 ubiquitin-protein ligase RNF216 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10628.10628.4 18.53 18.53 5.722 4 1 1 0 817.8557 3188.441 S776s TMT10 762 (R) VSINGYDHFCQHPRsPGAPCQECSR (C) VS(0.0)INGY(0.0)DHFCQHPRS(0.99)PGAPCQECS(0.0)R C:Carbamidomethylation,s:Phosphorylated S RNF216 107762.7 3 2 2855.1 68.03 HUMAN 1 5.8092 17.2815 HFDPVTRSPLTQEQL-p Q9UNE7;S273-p HFDPVTRSPLTQEQL 0.806340238065947 0.573612911050192 -0.0353333333333333 -0.0566666666666666 1.80084427192317 3.25451589154896 -0.0353333333333333 -0.0566666666666666 0.660565021159946 0.47265952136143 -0.464231490347001 -0.771536125957246 Q9UNE7 STUB1 Q9UNE7.S273.p_STUB1 Q9UNE7_S273s _1_1_273_273 Q9UNE7 Q9UNE7 E3 ubiquitin-protein ligase CHIP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27686.27686.3 10.35 9.77 1.2 2 1 1 0 664.6849 1912.0775 S273s Hydrogen 273 (R) sPLTQEQLIPNLAMK (E) S(0.99)PLT(0.0)QEQLIPNLAMK K:TMT10-Lys-Only,s:Phosphorylated S STUB1 35312 10 3 2394.1 85.43 HUMAN 1 -1.8008 -3.2545 HFEAQRDSPPTKGLR-p Q6PJ61;S240-p HFEAQRDSPPTKGLR 0.647690823716801 0.058902389516972 0.0653333333333333 -0.220666666666667 3.53309073861265 16.3844624821246 0.0653333333333334 -0.220666666666667 0.443293053782204 0.0229907824412036 0.826756552828078 -3.14007840988326 Q6PJ61 FBXO46 Q6PJ61.S240.p_FBXO46 Q6PJ61_S240s _1_1_240_240 Q6PJ61 Q6PJ61 F-box only protein 46 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16559.16559.4 14.12 14.12 3.909 2 1 1 0 623.574 2411.3083 S240s TMT10 227 (R) VAEAVAHFEAQRDsPPTK (G) VAEAVAHFEAQRDS(0.99)PPT(0.0)K K:TMT10,s:Phosphorylated S FBXO46 65770.7 1 2 4010.1 39.15 HUMAN 1 3.5331 -16.3845 HFFLLNESDDDDRIR-p Q9Y252;S597-p HFFLLNESDDDDRIR 0.955143802327492 0.434341520422358 -0.00933333333333334 -0.175 0.391066262905765 4.82642105428262 -0.00933333333333333 -0.175 0.913888839493939 0.329122743512019 -0.11328507665842 -1.07194041072037 Q9Y252 RNF6 Q9Y252.S597.p_RNF6 Q9Y252_S597s_1_1_597_597 Q9Y252 Q9Y252|Q9Y252-2 E3 ubiquitin-protein ligase RNF6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24985.24985.4 17.83 17.83 99 1 1 1 0 597.2919 2305.1774 N595n S597s TMT10 588 (R) LAHFFLLnEsDDDDRIR (G) LAHFFLLN(1.0)ES(1.0)DDDDRIR n:Deamidated,s:Phosphorylated S RNF6 78489.2 1 1 5595.1 17.83 HUMAN 1 -0.3911 -4.8264 HFGKAPGTPHSHTKP-p Q07020;T158-p HFGKAPGTPHSHTKP 0.775375634747585 0.0059658303654763 0.052 -0.514666666666667 2.11656443139334 32.1254370716455 0.052 -0.514666666666667 0.61424772529646 0.000612994097647051 0.534464075386204 -7.09347370836753 Q07020 RPL18 Q07020.T158.p_RPL18 Q07020_T158t _1_1_158_158 Q07020 Q07020|Q07020-2|F8VYV2 60S ribosomal protein L18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4871.4871.4 10.59 10.59 10.59 4 1 1 0 522.2811 2006.1336 T158t TMT10 155 (K) APGtPHSHTKPYVR (S) APGT(0.99)PHS(0.0)HT(0.0)KPY(0.0)VR K:TMT10,t:Phosphorylated T RPL18 21748.2 1 2 3881.1 41.42 HUMAN 1 2.1166 -32.1254 HFKAPKISMPDLDLH-p Q09666;S2387-p HFKAPKISMPDLDLH 0.471045565798352 0.586327382371113 0.133666666666667 0.099 6.03683965496884 3.13415209806059 0.133666666666667 0.0990000000000001 0.249066910977016 0.485942395435545 1.29112362407759 0.747423215388598 Q09666 AHNAK Q09666.S2387.p_AHNAK Q09666_S2387s _1_1_2387_2387 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28203.28203.3 17.66 12.2 99 1 1 1 0 607.331 1740.013 S2387s TMT10 2386 (K) IsMPDLDLHLK (S) IS(1.0)MPDLDLHLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 68 1.1 4313.36 HUMAN 1 6.0368 3.1342 HFKAPKISMPDVDLH-p Q09666;S1654-p HFKAPKISMPDVDLH 0.294750125885592 0.84629558466175 -0.164333333333333 0.0226666666666667 10.0092497615827 1.01867348800725 -0.164333333333333 0.0226666666666667 0.0997872430178583 0.790920170299437 -1.98331750206173 0.278528435213491 Q09666 AHNAK Q09666.S1654.p_AHNAK Q09666_S1654s _1_1_1654_1654 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22756.22756.5 17.29 17.29 99 1 1 1 0 467.0684 2251.3451 S1654s TMT10 1650 (K) APKIsMPDVDLHLK (G) APKIS(1.0)MPDVDLHLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 60 1.1 4313.36 HUMAN 1 -10.0092 1.0187 HFKAPKISMPDVDLN-p Q09666;S1324-p HFKAPKISMPDVDLN 0.409017991614316 0.863059778441893 -0.117666666666667 0.0303333333333334 7.16007494793878 0.901758093448896 -0.117666666666667 0.0303333333333334 0.192305854163205 0.812501535977475 -1.48900542422608 0.249026411593649 Q09666 AHNAK Q09666.S1324.p_AHNAK Q09666_S1324s _1_1_1324_1324 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29329.29329.3 14.73 11.38 99 1 1 1 0 594.9888 1702.9814 S1324s TMT10 1323 (K) IsMPDVDLNLK (G) IS(1.0)MPDVDLNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 5 56 1.1 4313.36 HUMAN 1 -7.1601 0.9018 HFKAPNISMPDVDLN-p Q09666;S2454-p HFKAPNISMPDVDLN 0.975439658986068 0.831724998821924 0.00933333333333331 -0.0356666666666666 0.20995732937019 1.12042294854771 0.00933333333333329 -0.0356666666666666 0.952805525554554 0.772605339327652 0.0619776310954604 -0.303787903142027 Q09666 AHNAK Q09666.S2454.p_AHNAK Q09666_S2454s _1_1_2454_2454 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28586.28586.3 10.19 10.19 99 1 1 1 0 689.032 1985.1142 S2454s TMT10 2450 (K) APNIsMPDVDLNLK (G) APNIS(1.0)MPDVDLNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 71 1.1 4313.36 HUMAN 1 0.21 -1.1204 HFKPIVCSPCTPPKR-p Q8NCN4;S388-p HFKPIVCSPCTPPKR 0.0635370415880919 0.00259997565261951 -0.447 -0.955166666666667 25.9156083907041 39.4158407891435 -0.447 -0.955166666666667 0.00256117445136078 0.000114397338643969 -5.27947302309562 -9.87169126594655 Q8NCN4 RNF169 Q8NCN4.S388.p_RNF169 Q8NCN4_S388sT391t_2_2_388_391 Q8NCN4 Q8NCN4 E3 ubiquitin-protein ligase RNF169 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25289.25289.5 18.43 18.43 2.658 7 2 2 0 821.3942 3943.0185 S388s T391t TMT10 366 (R) SVSPESNDSISEELNHFKPIVCsPCtPPK (R) S(0.0)VS(0.0)PES(0.0)NDS(0.0)IS(0.0)EELNHFKPIVCS(0.99)PCT(0.99)PPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T RNF169 78277 1 16 729.1 236.14 HUMAN 2 -25.9156 -39.4158 HFKTPKISMPDIDLN-p Q09666;S2836-p HFKTPKISMPDIDLN 0.321302149653388 0.643247086095429 -0.156 0.0603333333333334 9.22927569741405 2.61176383446644 -0.156 0.0603333333333334 0.119418725062586 0.548054334080973 -1.84805909384621 0.640307015885387 Q09666 AHNAK Q09666.S2836.p_AHNAK Q09666_S2836s _1_1_2836_2836 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.32018.32018.3 15.66 15.63 7 2 1 1 0 684.6996 1972.1189 S2836s TMT10 2835 (K) IsMPDIDLNLTGPK (I) IS(0.99)MPDIDLNLT(0.0)GPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 75 1.1 4313.36 HUMAN 1 -9.2293 2.6118 HFKTPKISMPDVDFN-p Q09666;S2313-p HFKTPKISMPDVDFN 0.971623711929894 0.283236793357339 0.00766666666666666 0.312333333333333 0.243028392134976 7.22272976567416 0.00766666666666665 0.312333333333333 0.945577567834983 0.189551411793223 0.0714875615080614 1.49951973546654 Q09666 AHNAK Q09666.S2313.p_AHNAK Q09666_S2313s _1_1_2313_2313 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30499.30499.3 13.62 13.62 99 1 1 1 0 606.317 1736.9657 S2313s TMT10 2312 (K) IsMPDVDFNLK (G) IS(1.0)MPDVDFNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 67 1.1 4313.36 HUMAN 1 0.243 7.2227 HFKTPKISMPDVDLH-p Q09666;S1196-p HFKTPKISMPDVDLH 0.964902156960383 0.665840448921148 -0.0106666666666667 0.0833333333333334 0.30051827404308 2.41772989190257 -0.0106666666666667 0.0833333333333334 0.933142935665623 0.573095516442099 -0.0878664921534306 0.599370073337164 Q09666 AHNAK Q09666.S1196.p_AHNAK Q09666_S1196s _1_1_1196_1196 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22946.22946.4 16.76 10.39 3.24 2 1 1 0 591.0861 2281.3557 S1196s TMT10 1192 (K) TPKIsMPDVDLHLK (G) T(0.0)PKIS(0.99)MPDVDLHLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 52 1.1 4313.36 HUMAN 1 -0.3005 2.4177 HFKTPKISMPDVNLN-p Q09666;S2185-p HFKTPKISMPDVNLN 0.671140667072122 0.84393587596449 -0.0633333333333333 0.0256666666666667 3.24345704578598 1.03461460208022 -0.0633333333333334 0.0256666666666667 0.47386463211051 0.788022358359285 -0.769441884481438 0.282510781890715 Q09666 AHNAK Q09666.S2185.p_AHNAK Q09666_S2185s _1_1_2185_2185 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28560.28560.3 16.2 16.2 99 1 1 1 0 594.6603 1701.9973 S2185s TMT10 2184 (K) IsMPDVNLNLK (G) IS(1.0)MPDVNLNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 65 1.1 4313.36 HUMAN 1 -3.2435 1.0346 HFQSKLITPPPPPPS-p Q96HE9;T33-p HFQSKLITPPPPPPS 0.839951610552414 0.824389399600967 -0.0576666666666667 0.0226666666666667 1.46352320589789 1.1752710257212 -0.0576666666666666 0.0226666666666667 0.713916927311236 0.762909279575792 -0.386421238845413 0.31725131179868 Q96HE9 PRR11 Q96HE9.T33.p_PRR11 Q96HE9_T33tS40s_2_2_33_40 Q96HE9 Q96HE9 Proline-rich protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26926.26926.4 11.06 11.06 2.326 6 2 2 0 758.1381 2869.5985 T33t S40s TMT10 31 (K) LItPPPPPPsPERVGISSIDISQSR (S) LIT(0.99)PPPPPPS(0.99)PERVGIS(0.0)S(0.0)IDIS(0.0)QS(0.0)R t:Phosphorylated T,s:Phosphorylated S PRR11 40597.8 1 9 1094.1 178.6 HUMAN 1 -1.4635 1.1753 HFRAPKMSLPDVDLD-p Q09666;S1068-p HFRAPKMSLPDVDLD 0.0629683487287699 0.0395615477487953 -0.558333333333333 0.407 26.0605770045337 18.8120726448506 -0.558333333333333 0.407 0.00247709292869841 0.0131459729863827 -5.31750141782051 3.62538047681071 Q09666 AHNAK Q09666.S1068.p_AHNAK Q09666_S1068s _1_1_1068_1068 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27420.27420.4 18.05 18.05 99 1 1 1 0 574.5715 2215.2975 S1068s TMT10 1067 (K) MsLPDVDLDLKGPK (M) MS(1.0)LPDVDLDLKGPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 11 47 1.1 4313.36 HUMAN 1 -26.0606 18.8121 HFRHPKRSVSLSMRK-p O60238;S164-p HFRHPKRSVSLSMRK 0.594218535558287 0.00508983078797582 0.0746666666666667 1.10266666666667 4.16896865377162 33.3897583357106 0.0746666666666667 1.10266666666667 0.382915665894953 0.000458167380847796 0.94929342440726 7.51981590429169 O60238 BNIP3L O60238.S164.p_BNIP3L O60238_S164s _1_1_164_164 O60238 O60238|O60238-2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6091.6091.4 10.81 10.81 2.156 3 1 1 0 459.7579 1756.0416 S164s TMT10 160 (R) HPKRsVSLSMR (K) HPKRS(0.99)VS(0.0)LS(0.0)MR K:TMT10,s:Phosphorylated S BNIP3L 24044.1 5 4 2458.1 82.41 HUMAN 1 4.169 33.3898 HFSASEESMDFLDKS-p Q9ULU4-19;S492-p HFSASEESMDFLDKS 0.873307433190242 0.0372239428292308 0.0273333333333333 0.31 1.15072810932911 19.2111625744886 0.0273333333333333 0.31 0.767232849406857 0.0119917824895366 0.311271058406386 3.70836845556478 Q9ULU4 ZMYND8 Q9ULU4.19.S492.p_ZMYND8 Q9ULU4-19_S487sS489sS492s_3_3_487_492 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-10|Q9ULU4-13|Q9ULU4-20|Q9ULU4-5|Q9ULU4-9|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-18|Q9ULU4-21|Q9ULU4-8|Q9ULU4-23|Q9ULU4-15|A0A087WYS3|Q9ULU4-17|Q9ULU4-6|Q9ULU4-3|A0A087WV57|Q9ULU4-4 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22047.22047.3 9.99 9.99 4.882 6 3 3 0 1015.4454 2804.438 S487s S489s S492s TMT10 480 (K) KATSSHFsAsEEsMDFLDK (S) KAT(0.0)S(0.0)S(0.0)HFS(0.99)AS(0.99)EES(0.99)MDFLDK K:TMT10,s:Phosphorylated S ZMYND8 139738.7 3 29 57.1 712.18 HUMAN 1 1.1507 19.2112 HFSSRRNSSDSFCRN-p Q96N46;S629-p HFSSRRNSSDSFCRN 0.0310171791072613 0.295265530064616 -0.712 -0.111333333333333 35.2524906740685 6.99348991238258 -0.712 -0.111333333333333 0.000298367099612924 0.199825546211277 -8.20368557142918 -1.45947076647102 Q96N46 TTC14 Q96N46.S629.p_TTC14 Q96N46_S629s _1_1_629_629 Q96N46 Q96N46 Tetratricopeptide repeat protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4232.4232.3 11.01 11.01 1.15 3 1 1 0 479.8768 1357.648 S629s TMT10 627 (R) RNsSDSFCR (N) RNS(0.99)S(0.0)DS(0.0)FCR C:Carbamidomethylation,s:Phosphorylated S TTC14 88830.6 2 1 5015.1 23.9 HUMAN 1 -35.2525 -6.9935 HFVQENGTLRAKPTG-p Q96NY8;T491-p HFVQENGTLRAKPTG 0.960719111754911 0.812728311323618 -0.00966666666666667 -0.037 0.334709273690575 1.26142642867529 -0.00966666666666666 -0.037 0.925825359838975 0.747923806579515 -0.0975179405840901 -0.338192744436283 Q96NY8 PVRL4 Q96NY8.T491.p_PVRL4 Q96NY8_T491t _1_1_491_491 Q96NY8 Q96NY8|Q96NY8-2 Nectin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11252.11252.3 15.63 15.63 99 1 1 1 0 651.9791 1873.954 T491t TMT10 480 (K) QAMNHFVQENGtLR (A) QAMNHFVQENGT(1.0)LR t:Phosphorylated T NECTIN4 55966.8 1 7 1903.1 108.23 HUMAN 1 -0.3347 -1.2614 HFVRGLASPLGHRMQ-p Q8WUA4;S871-p HFVRGLASPLGHRMQ 0.836227871107547 0.0107864844863671 -0.034 0.470666666666667 1.50199743814245 27.5687155306443 -0.034 0.470666666666667 0.707620255777425 0.00175036429982027 -0.39545569825768 5.71706826880307 Q8WUA4 GTF3C2 Q8WUA4.S871.p_GTF3C2 Q8WUA4_S871s _1_1_871_871 Q8WUA4 Q8WUA4 General transcription factor 3C polypeptide 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9453.9453.3 10.8 10.8 99 1 1 1 0 406.2185 1136.6738 S871s TMT10 868 (R) GLAsPLGHR (M) GLAS(1.0)PLGHR s:Phosphorylated S GTF3C2 101761.7 2 9 753.1 231.45 HUMAN 1 -1.502 27.5687 HFVRRKKSEPDDELL-p Q8TBA6;S116-p HFVRRKKSEPDDELL 0.161132785458414 0.020379930359248 -0.321666666666667 0.382333333333333 15.8819316340345 23.1487494026641 -0.321666666666667 0.382333333333333 0.025811119207907 0.00484311810263519 -3.04555260131634 4.58450236617938 Q8TBA6 GOLGA5 Q8TBA6.S116.p_GOLGA5 Q8TBA6_S116s _1_1_116_116 Q8TBA6 Q8TBA6|Q8TBA6-2 Golgin subfamily A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26412.26412.5 25.03 25.03 23.076 4 1 1 0 756.201 3697.0255 S116s TMT10 114 (R) KKsEPDDELLFDFLNSSQKEPTGR (V) KKS(0.99)EPDDELLFDFLNS(0.0)S(0.0)QKEPT(0.0)GR K:TMT10,s:Phosphorylated S GOLGA5 83080 29 2 909.1 201.86 HUMAN 1 -15.8819 23.1487 HGAPAAPSPPPRGSR-p Q4KMP7;S22-p HGAPAAPSPPPRGSR 0.340143533282251 0.892665266767967 0.148 0.0143333333333333 8.71218111823898 0.691788060912069 0.148 0.0143333333333333 0.134518460437895 0.852748951140865 1.75854100465459 0.194654907740188 Q4KMP7 TBC1D10B Q4KMP7.S22.p_TBC1D10B Q4KMP7_S22s _1_1_22_22 Q4KMP7 Q4KMP7 TBC1 domain family member 10B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4812.5018.3 17.04 17.04 99 1 1 1 0 488.5835 1383.7694 S22s TMT10 15 (R) HGAPAAPsPPPR (G) HGAPAAPS(1.0)PPPR s:Phosphorylated S TBC1D10B 87710.7 22 1 462.1 304.34 HUMAN 1 8.7122 0.6918 HGAREAHSPGPLVKP-p D6RIS4;S91-p HGAREAHSPGPLVKP 0.251085974261154 0.00594025529401107 -0.174666666666667 0.594 11.4534029554547 32.1626089168055 -0.174666666666667 0.594 0.071558248906235 0.000607769788908097 -2.23574135292413 7.10571246001767 D6RIS4 NotFound D6RIS4.S91.p_NotFound D6RIS4_S91s _1_1_91_91 D6RIS4 P35548|D6RIS4 Homeobox protein MSX-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9452.9452.3 16.02 16.02 99 1 1 1 0 524.957 1492.8888 S91s TMT10 88 (R) EAHsPGPLVK (P) EAHS(1.0)PGPLVK K:TMT10,s:Phosphorylated S MSX2 13668.9 5 3 1549.1 132.58 HUMAN 1 -11.4534 32.1626 HGDDLKHTRSEMVEL-p F8W1S1;T354-p HGDDLKHTRSEMVEL 0.603085598910672 0.00839507320642349 -0.171333333333333 0.482666666666667 4.05619199531299 29.5058562371355 -0.171333333333333 0.485344971032034 0.392989367465925 0.00112050648990765 -0.927855619499577 6.27344797384471 F8W1S1 NotFound F8W1S1.T354.p_NotFound F8W1S1_T354tS356s_2_2_354_356 F8W1S1 F8W1S1|Q7RTS7 Keratin, type II cytoskeletal 74 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10324.10324.2 8.55 4.34 99 2 2 2 0 1144.047 2111.1705 T354t S356s M358m TMT10 353 (K) HtRsEmVELNRLIQR (I) HT(1.0)RS(1.0)EM(1.0)VELNRLIQR t:Phosphorylated T,s:Phosphorylated S,m:Oxidized methionine KRT74 59862.6 1 3 69.6 672.47 HUMAN 1 -4.0562 29.5059 HGEESNESAESSSNW-p Q9H4L7-2;S242-p HGEESNESAESSSNW 0.30062605052911 0.0703980045091087 0.206833333333333 0.300833333333333 9.80569218098226 15.3243767476894 0.206833333333333 0.300833333333333 0.104575700384213 0.0293469062868926 1.94797148424386 2.93754466987641 Q9H4L7 SMARCAD1 Q9H4L7.2.S242.p_SMARCAD1 Q9H4L7-2_S239sS242s_2_2_239_242 Q9H4L7-2 Q9H4L7-2 Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9492.9492.4 10.11 10.11 1.17 6 2 2 0 842.6435 3207.6121 S239s S242s TMT10 230 (K) KTRLDHGEEsNEsAESSSNWEK (Q) KT(0.0)RLDHGEES(0.99)NES(0.99)AES(0.0)S(0.0)S(0.0)NWEK K:TMT10,s:Phosphorylated S SMARCAD1 118399.2 1 17 250.1 406.83 HUMAN 2 9.8057 15.3244 HGEMWAISPNDRLIP-p Q96RT1-8;S1060-p HGEMWAISPNDRLIP 0.712215551335925 0.0444388044064333 0.05 -0.271 2.77295135161642 18.1035165984224 0.05 -0.271 0.528086256210671 0.015475630083359 0.67390641578479 -3.48037543409285 Q96RT1 ERBB2IP Q96RT1.8.S1060.p_ERBB2IP Q96RT1-8_S1060s _1_1_1060_1060 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21985.21985.4 17.97 17.97 4.089 2 1 1 0 618.8162 2392.2757 S1060s TMT10 1053 (R) HGEMWAIsPNDRLIPAVTR (S) HGEMWAIS(0.99)PNDRLIPAVT(0.0)R s:Phosphorylated S ERBIN 159762.8 3 19 81.1 633.5 HUMAN 1 2.773 -18.1035 HGGDPKLSPHKVQGR-p Q9GZP8;S29-p HGGDPKLSPHKVQGR 0.272180623594328 0.0415164352321323 -0.179666666666667 -0.257333333333333 10.7069776411823 18.5226486894272 -0.179666666666667 -0.257333333333333 0.08497716456509 0.0140519026069721 -2.10484993461836 -3.56579583246657 Q9GZP8 C19orf33 Q9GZP8.S29.p_C19orf33 Q9GZP8_S29s _1_1_29_29 Q9GZP8 Q9GZP8|Q9GZP8-2 Immortalization up-regulated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21356.21356.5 19.41 19.41 1.926 3 1 1 0 896.4734 4398.3596 S29s Acetyl 1 (-) MEFDLGAALEPTSQKPGVGAGHGGDPKLsPHKVQGR (S) MEFDLGAALEPT(0.0)S(0.0)QKPGVGAGHGGDPKLS(0.99)PHKVQGR K:TMT10,s:Phosphorylated S IMUP 10896.9 17 1 2484.1 81.7 HUMAN 1 -10.707 -18.5226 HGGKKDGSGGASGTL-p Q9NYV4-2;S14-p HGGKKDGSGGASGTL 0.108274227113564 0.92514139499612 0.382666666666667 -0.0186666666666666 20.2725343648549 0.477312004453487 0.382666666666667 -0.0186666666666667 0.009391750864763 0.895919108642045 3.93768482814445 -0.137073259716587 Q9NYV4 CDK12 Q9NYV4.2.S14.p_CDK12 Q9NYV4-2_S14s _1_1_14_14 Q9NYV4-2 Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5971.5971.3 15.12 9.87 2.231 8 1 1 0 744.6625 2152.0064 S14s TMT10 12 (K) DGsGGASGTLQPSSGGGSSNSR (E) DGS(0.99)GGAS(0.0)GT(0.0)LQPS(0.0)S(0.0)GGGS(0.0)S(0.0)NS(0.0)R s:Phosphorylated S CDK12 163853.1 1 2 59.1 708.76 HUMAN 1 20.2725 -0.4773 HGHRKCHSLGYNFIH-p Q86X27;S343-p HGHRKCHSLGYNFIH 0.828189167508043 0.206325965641573 -0.0306666666666667 -0.153 1.57180020922584 9.01739725845971 -0.0306666666666667 -0.153 0.696337812860665 0.125389241177905 -0.411737832508193 -1.81072178878007 Q86X27 RALGPS2 Q86X27.S343.p_RALGPS2 Q86X27_S343s_1_1_343_343 Q86X27 Q86X27|Q86X27-3 Ras-specific guanine nucleotide-releasing factor RalGPS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16267.16267.3 16.77 14.78 6.728 2 1 1 0 638.9828 1833.9834 S343s N347n TMT10 341 (K) CHsLGYnFIHK (M) CHS(0.99)LGY(0.0)N(1.0)FIHK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated RALGPS2 65508.3 12 7 614.1 261.34 HUMAN 1 -1.5718 -9.0174 HGIFVRQSQIQVFED-p Q14203;S92-p HGIFVRQSQIQVFED 0.129739749890184 0.277727712963128 -0.333333333333333 -0.139333333333333 18.3757214969646 7.33060367894201 -0.333333333333333 -0.139333333333333 0.0145354288728279 0.184901158441168 -3.53870717132213 -1.51832897997473 Q14203 DCTN1 Q14203.S92.p_DCTN1 Q14203_S92s _1_1_92_92 Q14203 Q14203|Q14203-6|E7EX90 Dynactin subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24282.24282.4 18.53 16.92 1.714 10 1 1 0 1187.051 4665.2092 S92s TMT10 78 (K) YFTCDEGHGIFVRQsQIQVFEDGADTTSPETPDSSASK (V) Y(0.0)FT(0.0)CDEGHGIFVRQS(0.99)QIQVFEDGADT(0.0)T(0.0)S(0.0)PET(0.0)PDS(0.0)S(0.0)AS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DCTN1 142434.1 1 1 2852.1 68.06 HUMAN 1 -18.3757 -7.3306 HGIPIPVTPKNPWSM-p P00966;T174-p HGIPIPVTPKNPWSM 0.183896650188356 0.335578600613594 -0.289333333333333 0.224666666666667 14.463170589076 6.28521990090006 -0.289333333333333 0.224666666666667 0.0357835102373325 0.235222038792075 -2.7783615535339 1.33488636647711 P00966 ASS1 P00966.T174.p_ASS1 P00966_T174t _1_1_174_174 P00966 P00966 Argininosuccinate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16923.16923.3 14.57 14.57 99 1 1 1 0 575.6677 1645.0201 T174t TMT10 166 (K) QHGIPIPVtPK (N) QHGIPIPVT(1.0)PK K:TMT10,t:Phosphorylated T ASS1 46814.8 1 1 2503.1 80.83 HUMAN 1 -14.4632 6.2852 HGKLKDNSGLEVDVA-p Q01826-2;S742-p HGKLKDNSGLEVDVA 0.244065722861738 0.0044825839263387 -0.223333333333333 -0.544333333333333 11.7163860737446 34.4644696303579 -0.223333333333333 -0.544333333333333 0.067353689831019 0.000357728084422227 -2.28212807853865 -7.89913268602534 Q01826 SATB1 Q01826.2.S742.p_SATB1 Q01826-2_S742s _1_1_742_742 Q01826-2 Q01826-2 Isoform 2 of DNA-binding protein SATB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26095.26095.4 10.29 10.29 10.294 2 1 1 0 855.2216 3337.8913 S742s TMT10 738 (K) LKDNsGLEVDVAEYKEEELLK (D) LKDNS(0.99)GLEVDVAEY(0.0)KEEELLK K:TMT10,s:Phosphorylated S SATB1 89467.4 1 12 821.1 218.79 HUMAN 1 -11.7164 -34.4645 HGKLKFGTFGGLGSK-p Q09666;T5824-p HGKLKFGTFGGLGSK 0.123350251698765 0.00510538330354147 0.363333333333333 0.863666666666667 18.9275846683295 33.3564761735318 0.363333333333333 0.863666666666667 0.0128009303082219 0.00046169203539871 3.65248445283387 7.50832192883878 Q09666 AHNAK Q09666.T5824.p_AHNAK Q09666_T5824t _1_1_5824_5824 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23510.23510.3 11.32 8.63 5.394 2 1 1 0 503.6025 1428.8251 T5824t TMT10 5822 (K) FGtFGGLGSK (S) FGT(0.99)FGGLGS(0.0)K K:TMT10,t:Phosphorylated T AHNAK 629603.7 5 162 1.1 4313.36 HUMAN 1 18.9276 33.3565 HGKLYSPSQIGAFVL-p P38646;S164-p HGKLYSPSQIGAFVL 0.660198012756113 0.0781849843881636 0.067 0.197333333333333 3.37749576145833 14.6878706562975 0.067 0.197333333333333 0.459462872975449 0.0339791831522574 0.796096265620658 2.81832115143575 P38646 HSPA9 P38646.S164.p_HSPA9 P38646_S164s _1_1_164_164 P38646 P38646 Stress-70 protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37182.37182.2 18.88 18.88 1.123 3 1 1 0 1046.5706 2012.1655 S164s TMT10 160 (K) LYSPsQIGAFVLMK (M) LY(0.0)S(0.0)PS(0.99)QIGAFVLMK K:TMT10,s:Phosphorylated S HSPA9 73964.5 9 26 367.2 341.38 HUMAN 1 3.3775 14.6879 HGLKVRKSFLSYNKT-p Q8WXA3;S112-p HGLKVRKSFLSYNKT 0.0500887552739184 0.290947912639728 -0.618666666666667 -0.118333333333333 28.701453952275 7.07673602899514 -0.618666666666667 -0.118333333333333 0.00134851134579832 0.196031741047784 -6.04656299729031 -1.47402715174902 Q8WXA3 RUFY2 Q8WXA3.S112.p_RUFY2 Q8WXA3_S112s _1_1_112_112 Q8WXA3 Q8WXA3|Q8WXA3-3|Q8WXA3-2|Q8WXA3-4|Q8WXA3-5 RUN and FYVE domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19002.19002.2 10.78 10.78 10.778 3 1 1 0 698.8674 1316.7615 S112s TMT10 112 (K) sFLSYNK (T) S(0.99)FLS(0.0)Y(0.0)NK K:TMT10,s:Phosphorylated S RUFY2 75852.4 1 1 4163.1 36.41 HUMAN 1 -28.7015 -7.0767 HGLLKLGSGGVVKKK-p Q96JH7;S1008-p HGLLKLGSGGVVKKK 0.295243174589512 0.82093829036551 -0.164333333333333 -0.027 9.97644428206984 1.19876626280046 -0.164333333333333 -0.027 0.100543864049624 0.758793101211785 -1.97761830191249 -0.322986930000803 Q96JH7 VCPIP1 Q96JH7.S1008.p_VCPIP1 Q96JH7_S1008s _1_1_1008_1008 Q96JH7 Q96JH7 Deubiquitinating protein VCIP135 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14475.14475.2 10.31 4.36 99 1 1 1 0 627.8658 1174.756 S1008s TMT10 1006 (K) LGsGGVVK (K) LGS(1.0)GGVVK K:TMT10,s:Phosphorylated S VCPIP1 135687.4 1 7 725.1 236.71 HUMAN 1 -9.9764 -1.1988 HGLLLPASPVRMHSS-p Q96E09;S76-p HGLLLPASPVRMHSS 0.524451757460105 0.0450990980745789 0.0986666666666667 0.263 5.18601046575351 18.0094638600522 0.0986666666666667 0.263 0.302969530160562 0.0158144325763204 1.13803880677149 3.46134525253468 Q96E09 FAM122A Q96E09.S76.p_FAM122A Q96E09_S76s _1_1_76_76 Q96E09 Q96E09 Protein FAM122A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16204.16204.3 14.45 14.45 99 1 1 1 0 490.279 1388.8575 S76s TMT10 69 (R) HGLLLPAsPVR (M) HGLLLPAS(1.0)PVR s:Phosphorylated S FAM122A 30813.8 4 4 509.1 287.77 HUMAN 1 5.186 18.0095 HGLSRSHSLSGARDN-p Q9Y519;S388-p HGLSRSHSLSGARDN 0.72521416752887 0.0387498671112032 0.069 -0.281666666666667 2.64424268863042 18.9560870720313 0.069 -0.281666666666667 0.543970979688558 0.0127171938923363 0.64717897985332 -3.65521563169326 Q9Y519 TMEM184B Q9Y519.S388.p_TMEM184B Q9Y519_S388s _1_1_388_388 Q9Y519 Q9Y519 Transmembrane protein 184B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3995.3995.4 13.26 11.37 2.204 3 1 1 0 460.4846 1758.9499 S388s TMT10 386 (R) SHsLSGARDNEK (T) S(0.0)HS(0.99)LS(0.0)GARDNEK K:TMT10,s:Phosphorylated S TMEM184B 46302.6 4 3 3119.1 60.29 HUMAN 1 2.6442 -18.9561 HGLSSVDSLPLDELP-p Q5FWE3;S928-p HGLSSVDSLPLDELP 0.470110243897234 0.0283169712966503 0.115333333333333 0.353333333333333 6.05094570042809 20.9715128728488 0.115333333333333 0.353333333333333 0.248259244809651 0.00799555679790983 1.29363406934086 4.08655618242532 Q5FWE3 PRRT3 Q5FWE3.S928.p_PRRT3 Q5FWE3_S928s _1_1_928_928 Q5FWE3 Q5FWE3|Q5FWE3-2 Proline-rich transmembrane protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32920.32920.4 24.34 22.83 1.615 8 1 1 0 941.2324 3681.9537 S928s TMT10 921 (R) HGLSSVDsLPLDELPSTVQLLPAPTPAPDSTAAR (Q) HGLS(0.0)S(0.0)VDS(0.99)LPLDELPS(0.0)T(0.0)VQLLPAPT(0.0)PAPDS(0.0)T(0.0)AAR s:Phosphorylated S PRRT3 102765.9 2 9 931.1 199.28 HUMAN 1 6.0509 20.9715 HGMDRVGSEIERMGL-p P52272;S432-p HGMDRVGSEIERMGL 0.573894540662309 0.112680700984798 0.107 0.26 4.43844569594618 12.5053810779933 0.107 0.26 0.359878109511526 0.0561644993838663 1.00006464426924 2.42104107468191 P52272 HNRNPM P52272.S432.p_HNRNPM P52272_S432s _1_1_432_432 P52272 P52272|A0A087X0X3|P52272-2 Heterogeneous nuclear ribonucleoprotein M HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13248.13248.4 16.54 12.01 99 1 1 1 0 546.0099 2101.048 S432s TMT10 419 (R) MGAGLGHGMDRVGsEIER (M) MGAGLGHGMDRVGS(1.0)EIER s:Phosphorylated S HNRNPM 77799.7 3 6 830.1 216.57 HUMAN 1 4.4384 12.5054 HGPERSQSPAASDCS-p O95817;S173-p HGPERSQSPAASDCS 0.506389652891927 0.0778325933281396 0.132 0.259333333333333 5.45557787342522 14.7099851286704 0.132 0.259333333333333 0.284735890461186 0.033806599382654 1.18692881277499 2.82243531102266 O95817 BAG3 O95817.S173.p_BAG3 O95817_S173s _1_1_173_173 O95817 O95817 BAG family molecular chaperone regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5131.5131.2 25.53 25.53 1.333 12 1 1 0 1140.4578 2199.9419 S173s Hydrogen 171 (R) SQsPAASDCSSSSSSASLPSSGR (S) S(0.0)QS(0.99)PAAS(0.0)DCS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)AS(0.0)LPS(0.0)S(0.0)GR C:Carbamidomethylation,s:Phosphorylated S BAG3 61764.7 9 3 416.1 321.05 HUMAN 1 5.4556 14.71 HGPHDLRSPVYDIRE-p Q9C0B0;S158-p HGPHDLRSPVYDIRE 0.334087824907045 0.215091271986357 0.133666666666667 -0.179 8.88773329150857 8.78203467651884 0.133666666666667 -0.179 0.129189337419323 0.132372122440978 1.78892905358565 -1.77001289546296 Q9C0B0 UNK Q9C0B0.S158.p_UNK Q9C0B0_S158s _1_1_158_158 Q9C0B0 Q9C0B0 RING finger protein unkempt homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13328.13328.5 24.46 24.46 4.371 2 1 1 0 569.0789 2761.3943 S158s TMT10 143 (K) NGLHCAFAHGPHDLRsPVYDIR (E) NGLHCAFAHGPHDLRS(0.99)PVY(0.0)DIR C:Carbamidomethylation,s:Phosphorylated S UNK 89851.6 1 2 1185.1 168.8 HUMAN 1 8.8877 -8.782 HGQPRPPSNRTVQSP-p O15164;S654-p HGQPRPPSNRTVQSP 0.103158959778694 0.307806431984155 -0.424666666666667 0.158333333333333 20.8272246079431 6.76265704357993 -0.424666666666667 0.158333333333333 0.00826566004148607 0.210733847125196 -4.05877388875619 1.41902141490128 O15164 TRIM24 O15164.S654.p_TRIM24 O15164_S654s _1_1_654_654 O15164 O15164 Transcription intermediary factor 1-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4775.4775.3 14.92 9.51 8.29 2 1 1 0 671.6552 1932.9838 S654s TMT10 642 (K) DTNIDHGQPRPPsNR (T) DT(0.0)NIDHGQPRPPS(0.99)NR s:Phosphorylated S TRIM24 118769 1 5 598.1 263.51 HUMAN 1 -20.8272 6.7627 HGSSKGKSPSRNKKP-p Q15648;S1294-p HGSSKGKSPSRNKKP 0.73258802322441 0.609008321888172 0.23 -0.437333333333333 2.56264562306918 2.92657209916436 0.23 -0.437333333333333 0.554287950494734 0.509733046311329 0.630089300051618 -0.705360775646436 Q15648 MED1 Q15648.S1294.p_MED1 Q15648_S1294s _1_1_1294_1294 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13847.13847.5 12.75 7.92 2.642 4 1 1 0 631.1849 3071.9277 S1294s TMT10 1292 (K) GKsPSRNKKPSLTAVIDK (L) GKS(0.99)PS(0.0)RNKKPS(0.0)LT(0.0)AVIDK K:TMT10,s:Phosphorylated S MED1 169445 1 20 115.1 566.87 HUMAN 1 2.5626 -2.9266 HGSVEGRSPSSNDKH-p Q9H8V3;S866-p HGSVEGRSPSSNDKH 0.435048063020442 0.00205530259496525 0.128666666666667 -0.76 6.65532911106428 41.8468313560011 0.128666666666667 -0.76 0.216006633739939 6.53607255311473e-05 1.40053498956874 -10.9940542760675 Q9H8V3 ECT2 Q9H8V3.S866.p_ECT2 Q9H8V3_S866s _1_1_866_866 Q9H8V3 Q9H8V3-3|Q9H8V3-4|Q9H8V3-2 Protein ECT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7643.7643.4 17.56 17.56 1.245 6 1 1 0 625.3088 2418.2447 S866s TMT10 854 (R) ALMTSHGSVEGRsPSSNDK (H) ALMT(0.0)S(0.0)HGS(0.0)VEGRS(0.99)PS(0.0)S(0.0)NDK K:TMT10,s:Phosphorylated S ECT2 104530 4 14 572.1 269.2 HUMAN 1 6.6553 -41.8468 HGTALQRSLSELESL-p P22059;S238-p HGTALQRSLSELESL 0.450118444429121 0.373288470640298 -0.108666666666667 -0.115 6.40320826623942 5.6776764207478 -0.108666666666667 -0.115 0.228917594366375 0.270540543351816 -1.35608792829316 -1.2266469727663 P22059 OSBP P22059.S238.p_OSBP P22059_S238s _1_1_238_238 P22059 P22059 Oxysterol-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22714.22714.2 15.24 15.24 2.284 4 1 1 0 1206.64 2332.3012 S238s Hydrogen 238 (R) sLSELESLKLPAESNEK (I) S(0.99)LS(0.0)ELES(0.0)LKLPAES(0.0)NEK K:TMT10-Lys-Only,s:Phosphorylated S OSBP 90274.8 12 3 468.1 302.79 HUMAN 1 -6.4032 -5.6777 HGTQQVHSPPEQSPV-p P22670;S204-p HGTQQVHSPPEQSPV 0.198891919601198 0.0212539928964931 -0.379 -0.419 13.6533505266027 22.8762661156375 -0.379 -0.419 0.0431186293742611 0.00515671807343437 -2.62949055800485 -4.52021019925453 P22670 RFX1 P22670.S204.p_RFX1 P22670_S204s _1_1_204_204 P22670 P22670 MHC class II regulatory factor RFX1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11179.11179.4 16.68 16.68 1.332 9 1 1 0 924.9659 3616.872 S204s TMT10 189 (K) GGQVSLTVHGTQQVHsPPEQSPVQANSSSSK (T) GGQVS(0.0)LT(0.0)VHGT(0.0)QQVHS(0.99)PPEQS(0.0)PVQANS(0.0)S(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S RFX1 105098.2 1 3 1675.1 121.84 HUMAN 1 -13.6534 -22.8763 HGVKRSASPDDDLGS-p O00193;S17-p HGVKRSASPDDDLGS 0.351503676861441 0.0200493867267583 0.144 0.364 8.43766935011001 23.2774068413014 0.144 0.364 0.143295669199881 0.00470174764681356 1.71101286939365 4.61506444178484 O00193 C11orf58 O00193.S17.p_C11orf58 O00193_S17s _1_1_17_17 O00193 O00193|E9PM92|E9PQA1 Small acidic protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19633.19633.3 27.44 27.44 1.151 4 1 1 0 915.3895 2664.1859 S17s TMT10 15 (R) SAsPDDDLGSSNWEAADLGNEER (K) S(0.0)AS(0.99)PDDDLGS(0.0)S(0.0)NWEAADLGNEER s:Phosphorylated S SMAP 20389.2 42 1 825.1 217.63 HUMAN 1 8.4377 23.2774 HGVPLPGSPPPTVAL-p Q9UK80;S93-p HGVPLPGSPPPTVAL 0.349927283596409 0.866606565749996 0.159333333333333 0.0193333333333333 8.4709538992244 0.875963235356015 0.159333333333333 0.0193333333333333 0.142201641627935 0.817341737050737 1.71677690603344 0.242445524686483 Q9UK80 USP21 Q9UK80.S93.p_USP21 Q9UK80_S93s _1_1_93_93 Q9UK80 Q9UK80|Q9UK80-3|Q9UK80-2 Ubiquitin carboxyl-terminal hydrolase 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23784.23784.4 18.88 15.67 5.813 3 1 1 0 727.6499 2827.6144 S93s TMT10 80 (R) GPLRADHGVPLPGsPPPTVALPLPSR (T) GPLRADHGVPLPGS(0.99)PPPT(0.0)VALPLPS(0.0)R s:Phosphorylated S USP21 63510.4 3 1 3110.1 60.37 HUMAN 1 8.471 0.876 HGYENPTYKYLEQMQ-p Q06481-6;Y753-p HGYENPTYKYLEQMQ 0.139428933956042 0.0112026247211785 -0.308333333333333 -0.789333333333333 17.5099952739009 27.3131465402044 -0.308333333333333 -0.789333333333334 0.0177419141160775 0.00185645893044791 -3.36376774349273 -5.64659420322956 Q06481 APLP2 Q06481.6.Y753.p_APLP2 Q06481-6_Y753y _1_1_753_753 Q06481-6 Q06481|Q06481-6|Q06481-3|Q06481-2|Q06481-4|Q06481-5 Isoform 6 of Amyloid-like protein 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.9715.9932.3 24.2 17.5 1.773 3 1 1 0 673.9839 1939.9737 Y753y TMT10 743 (K) MQNHGYENPTyK (Y) MQNHGY(0.0)ENPT(0.0)Y(0.99)K K:TMT10,y:Phosphorylated Y APLP2 88411.7 3 3 131.1 24.2 HUMAN 1 -17.51 -27.3131 HHCKRYRSPEPDPYL-p P49761;S157-p HHCKRYRSPEPDPYL 0.688052891491185 0.950561945305192 0.0673333333333333 -0.0106666666666666 3.0494890466893 0.315381183369283 0.0673333333333333 -0.0106666666666666 0.495508484616535 0.929954888366916 0.730446280131975 -0.0920616129616936 P49761 CLK3 P49761.S157.p_CLK3 P49761_S157s _1_1_157_157 P49761 P49761|P49761-1|P49761-3|P49761-2 Dual specificity protein kinase CLK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9969.9969.4 17.53 17.53 6.735 5 1 1 0 527.7598 2028.05 S157s TMT10 154 (K) RYRsPEPDPYLSYR (W) RY(0.0)RS(0.99)PEPDPY(0.0)LS(0.0)Y(0.0)R s:Phosphorylated S CLK3 74312.5 6 1 2160.1 95.02 HUMAN 1 3.0495 -0.3154 HHCPGNHSWDSTISG-p O43353;S393-p HHCPGNHSWDSTISG 0.2592179584854 0.492914919569268 -0.164666666666667 0.0706666666666667 11.1408773777598 4.10658665061106 -0.164666666666667 0.0706666666666667 0.0768975073407504 0.388455553750981 -2.18080843225474 0.937287799746708 O43353 RIPK2 O43353.S393.p_RIPK2 O43353_S393s _1_1_393_393 O43353 O43353|O43353-2 Receptor-interacting serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6960.6960.4 15.38 15.38 2.352 5 1 1 0 622.0311 2405.1366 S393s TMT10 385 (K) LHHCPGNHsWDSTISGSQR (A) LHHCPGNHS(0.99)WDS(0.0)T(0.0)IS(0.0)GS(0.0)QR C:Carbamidomethylation,s:Phosphorylated S RIPK2 61764.4 1 5 1914.1 107.79 HUMAN 1 -11.1409 4.1066 HHDSDSNSPCCKRRK-p Q9BU76;S235-p HHDSDSNSPCCKRRK 0.0395731079578075 0.436696446947909 0.826 0.165333333333333 31.5118524831715 4.79321684931088 0.826 0.165333333333333 0.000706016338746918 0.331648712052813 6.9056258121487 1.0658161905597 Q9BU76 C1orf35 Q9BU76.S235.p_C1orf35 Q9BU76_S235s _1_1_235_235 Q9BU76 Q9BU76 Multiple myeloma tumor-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.2957.2957.4 13.69 13.69 1.562 3 1 1 0 564.7429 2175.9813 S235s TMT10 226 (R) HHHHDSDSNsPCCK (R) HHHHDS(0.0)DS(0.0)NS(0.99)PCCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MMTAG2 29696.6 1 6 2785.1 70.71 HUMAN 1 31.5119 4.7932 HHGRRPGSPSPPGRG-p H0Y3H0;S89-p HHGRRPGSPSPPGRG 0.863531937888239 0.568777056722404 -0.0333333333333333 0.133666666666667 1.24199019236202 3.30180962493405 -0.0333333333333333 0.133666666666667 0.751278535176735 0.467540285287621 -0.333524093249974 0.780957930007256 H0Y3H0 NotFound H0Y3H0.S89.p_NotFound H0Y3H0_S89s _1_1_89_89 H0Y3H0 H0Y3H0 Interferon-induced transmembrane protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3772.3772.3 9.07 9.07 1.115 2 1 1 0 439.5609 1236.701 S89s TMT10 86 (R) RPGsPSPPGR (G) RPGS(0.99)PS(0.0)PPGR s:Phosphorylated S IFITM10 13630.2 1 1 6853.1 9.07 HUMAN 1 -1.242 3.3018 HHHHDSDSNSPCCKR-p Q9BU76;S233-p HHHHDSDSNSPCCKR 0.00874686268802314 0.0352800843191153 1.37066666666667 -0.644 51.0354896869826 19.5525913136519 1.37066666666667 -0.644 7.87863591203006e-06 0.0110851319908994 16.4630398872144 -3.78014608007264 Q9BU76 C1orf35 Q9BU76.S233.p_C1orf35 Q9BU76_S231sS233sS235s_3_3_231_235 Q9BU76 Q9BU76 Multiple myeloma tumor-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3216.3216.4 8.35 8.35 99 3 3 3 0 643.751 2332.0824 S231s S233s S235s TMT10 226 (R) HHHHDsDsNsPCCKR (R) HHHHDS(1.0)DS(1.0)NS(1.0)PCCKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MMTAG2 29696.6 2 9 2785.1 70.71 HUMAN 1 51.0355 -19.5526 HHKISNLSPEEEQGL-p Q5HYJ3;S193-p HHKISNLSPEEEQGL 0.456713385817305 0.21615210124357 0.109 0.145666666666667 6.27199450898533 8.75450502567404 0.109 0.145666666666667 0.235939442614924 0.133213886025887 1.3328759562845 1.76525127597677 Q5HYJ3 FAM76B Q5HYJ3.S193.p_FAM76B Q5HYJ3_S193s _1_1_193_193 Q5HYJ3 Q5HYJ3|F5GX09|Q5HYJ3-2|Q5HYJ3-3 Protein FAM76B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24565.24767.3 16.04 16.04 3.385 2 1 1 0 723.3727 2088.1377 S193s TMT10 189 (K) ISNLsPEEEQGLWK (Q) IS(0.0)NLS(0.99)PEEEQGLWK K:TMT10,s:Phosphorylated S FAM76B 39677.2 8 2 2297.1 89.3 HUMAN 1 6.272 8.7545 HHPFLDASPSVRKSP-p O75385;S281-p HHPFLDASPSVRKSP 0.890988784685547 0.172411197899548 0.027 0.187 0.98014536337959 10.0356792008735 0.027 0.187 0.797967977911036 0.099181821489261 0.268890658994258 1.98710304874393 O75385 ULK1 O75385.S281.p_ULK1 O75385_S281s _1_1_281_281 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26438.26438.4 18.87 18.87 1.869 2 1 1 0 719.3287 2794.3245 S281s TMT10 265 (K) DRMDFDEFFHHPFLDAsPSVR (K) DRMDFDEFFHHPFLDAS(0.99)PS(0.0)VR s:Phosphorylated S ULK1 113656.3 1 2 351.1 351.01 HUMAN 1 0.9801 10.0357 HHPGGKETAHNENKF-p Q8NDB2;T751-p HHPGGKETAHNENKF 0.40723792230155 0.806985687423568 0.182333333333333 -0.0246666666666666 7.20507591696568 1.30284044515338 0.182333333333333 -0.0246666666666666 0.190323496773466 0.740825555740001 1.49686507867591 -0.348171921998188 Q8NDB2 BANK1 Q8NDB2.T751.p_BANK1 Q8NDB2_T751tY759yS764s_3_3_751_764 Q8NDB2 Q8NDB2|Q8NDB2-2|Q8NDB2-3|Q8NDB2-4 B-cell scaffold protein with ankyrin repeats HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25453.25742.4 7.02 3.59 99 3 3 3 0 1064.2836 4014.212 T751t Y759y S764s TMT10 750 (K) EtAHNENKFyNVHFsNKLPARPQVEK (E) ET(1.0)AHNENKFY(1.0)NVHFS(1.0)NKLPARPQVEK K:TMT10,t:Phosphorylated T,y:Phosphorylated Y,s:Phosphorylated S BANK1 90250.2 4 1 7287.1 7.02 HUMAN 1 7.2051 -1.3028 HHRRVPLSPLSLLAG-p Q53ET0;S433-p HHRRVPLSPLSLLAG 0.852077310598031 0.510905941099379 -0.0396666666666667 -0.069 1.34691079384483 3.9113405743047 -0.0396666666666667 -0.069 0.733345988395351 0.406317888152197 -0.358768040051478 -0.899993937570601 Q53ET0 CRTC2 Q53ET0.S433.p_CRTC2 Q53ET0_S433s _1_1_433_433 Q53ET0 Q53ET0|Q5T4K5 CREB-regulated transcription coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25737.25737.4 17.79 17.79 3.811 2 1 1 0 550.3148 2118.2709 S433s TMT10 429 (R) RVPLsPLSLLAGPADARR (S) RVPLS(0.99)PLS(0.0)LLAGPADARR s:Phosphorylated S CRTC2 73528.7 10 5 1040.1 185.06 HUMAN 1 -1.3469 -3.9113 HICFGMKSPEEMRQQ-p O14802;S24-p HICFGMKSPEEMRQQ 0.263118354190348 0.837405109853591 0.213666666666667 0.021 10.9964233460294 1.08211770221056 0.213666666666667 0.021 0.0794982677170489 0.779449943276266 2.15548275566903 0.294322495146328 O14802 POLR3A O14802.S24.p_POLR3A O14802_S24s _1_1_24_24 O14802 O14802 DNA-directed RNA polymerase III subunit RPC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15913.15913.4 11.16 11.16 11.16 2 1 1 0 680.1023 2637.4282 S24s TMT10 14 (K) KISHICFGMKsPEEMR (Q) KIS(0.0)HICFGMKS(0.99)PEEMR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S POLR3A 157635.6 1 1 5193.1 22 HUMAN 1 10.9964 1.0821 HIEALLGSPCGKGQP-p P49589-3;S79-p HIEALLGSPCGKGQP 0.547952287657366 0.369731857493161 -0.136333333333333 -0.0916666666666667 4.82173994624651 5.73099014331279 -0.136333333333333 -0.0916666666666667 0.329477684639156 0.267239706227526 -1.0712874543194 -1.23620785065094 P49589 CARS P49589.3.S79.p_CARS P49589-3_S79s _1_1_79_79 P49589-3 P49589-3|E9PLP0 Isoform 3 of Cysteine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17644.17644.3 15 15 99 1 1 1 0 607.323 1739.9878 S79s TMT10 72 (R) HIEALLGsPCGK (G) HIEALLGS(1.0)PCGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CARS 95434.6 3 1 2202.1 93.6 HUMAN 1 -4.8217 -5.731 HIEIIAPSPQRSRSF-p Q9NZJ5;S715-p HIEIIAPSPQRSRSF 0.742163837330897 0.195228969571354 -0.0496666666666667 -0.164 2.4601123102646 9.32795116034948 -0.0496666666666667 -0.164 0.567529928671153 0.11673602042537 -0.608447365999936 -1.86445140471467 Q9NZJ5 EIF2AK3 Q9NZJ5.S715.p_EIF2AK3 Q9NZJ5_S715s _1_1_715_715 Q9NZJ5 Q9NZJ5|E7ER02 Eukaryotic translation initiation factor 2-alpha kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13652.13652.2 14.55 14.55 99 1 1 1 0 849.9419 1618.9114 S715s TMT10 707 (K) EHIEIIAPsPQR (S) EHIEIIAPS(1.0)PQR s:Phosphorylated S EIF2AK3 126241 2 4 1191.1 168.13 HUMAN 1 -2.4601 -9.328 HIGIKNGYDFYPKAL-p Q5VZU9;Y118-p HIGIKNGYDFYPKAL 0.237800187730078 0.80019963133549 0.219666666666667 0.059 11.9529677995787 1.35371374046178 0.219666666666667 0.059 0.0637827470743104 0.7321981478286 2.32399516149042 0.36035532730533 Q5VZU9 TPP2 Q5VZU9.Y118.p_TPP2 Q5VZU9_Y118y _1_1_118_118 Q5VZU9 Q5VZU9|P29144 Tripeptidyl-peptidase 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.18106.18106.2 8.65 8.65 8.65 2 1 1 0 771.374 1461.7778 Y118y TMT10 116 (K) NGyDFYPK (A) NGY(0.99)DFY(0.0)PK K:TMT10,y:Phosphorylated Y TPP2 141246.4 1 1 384.1 8.65 HUMAN 1 11.953 1.3537 HIHLEMETRSILHQG-p H3BMM1;T381-p HIHLEMETRSILHQG 0.179935774950283 0.362634117704378 0.217 0.105 14.6977520354571 5.84192258650742 0.217 0.105 0.0339019591667338 0.260500008225807 2.82195419269819 1.25606028333646 H3BMM1 NotFound H3BMM1.T381.p_NotFound H3BMM1_T381tS383sT390t_3_3_381_390 H3BMM1 H3BMM1 Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19088.19088.4 7.04 7.04 7.044 4 3 3 0 828.4253 3070.7712 T381t S383s T390t TMT10 371 (K) LLSHIHLEMEtRsILHQGItRK (N) LLS(0.0)HIHLEMET(0.99)RS(0.99)ILHQGIT(0.99)RK K:TMT10,t:Phosphorylated T,s:Phosphorylated S MYO9A 151307 1 23 457.2 306.95 HUMAN 1 14.6978 5.8419 HIHQAGGSPPASSTS-p Q8N122;S877-p HIHQAGGSPPASSTS 0.16127524660131 0.0805685607186902 -0.321666666666667 -0.320333333333333 15.863231834353 14.5074623257274 -0.321666666666667 -0.320333333333333 0.0259224960256365 0.0354204249642071 -3.04197318578422 -2.78483109749674 Q8N122 RPTOR Q8N122.S877.p_RPTOR Q8N122_S877s _1_1_877_877 Q8N122 Q8N122|Q8N122-3 Regulatory-associated protein of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10414.10414.4 27.21 25.44 7.894 10 1 1 0 925.2213 3617.9036 S877s TMT10 868 (K) GVHIHQAGGsPPASSTSSSSLTNDVAKQPVSR (D) GVHIHQAGGS(0.99)PPAS(0.0)S(0.0)T(0.0)S(0.0)S(0.0)S(0.0)S(0.0)LT(0.0)NDVAKQPVS(0.0)R K:TMT10,s:Phosphorylated S RPTOR 150746.6 8 7 1778.1 115.46 HUMAN 1 -15.8632 -14.5075 HIKEEPLSEEEPCTS-p Q9Y2X3;S502-p HIKEEPLSEEEPCTS 0.924065631945411 0.00140014198002876 0.0166666666666667 0.969333333333333 0.676399845085204 46.2032670488515 0.0166666666666667 0.969333333333334 0.85577582825304 2.39702903764274e-05 0.190613388404226 13.3071472433099 Q9Y2X3 NOP58 Q9Y2X3.S502.p_NOP58 Q9Y2X3_S502s _1_1_502_502 Q9Y2X3 Q9Y2X3 Nucleolar protein 58 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13822.13822.4 25.71 25.71 3.81 5 1 1 0 927.4902 3626.9757 S502s TMT10 495 (K) HIKEEPLsEEEPCTSTAIASPEKK (K) HIKEEPLS(0.99)EEEPCT(0.0)S(0.0)T(0.0)AIAS(0.0)PEKK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NOP58 60090.6 29 8 481.1 298.21 HUMAN 1 0.6764 46.2033 HIKQQPGSPRRISQQ-p P28749;S975-p HIKQQPGSPRRISQQ 0.209461411369469 0.000952253650599092 0.255 -1.921 13.1083028761002 61.6859486724166 0.255 -1.921 0.0488843350868138 6.78273942225123e-07 2.53060096150302 -25.9294428377488 P28749 RBL1 P28749.S975.p_RBL1 P28749_S975s _1_1_975_975 P28749 P28749|P28749-2 Retinoblastoma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3192.3192.2 8.63 5.68 99 1 1 1 0 617.8166 1154.6592 S975s TMT10 971 (K) QQPGsPRR (I) QQPGS(1.0)PRR s:Phosphorylated S RBL1 122214.1 1 10 566.1 270.71 HUMAN 1 13.1083 -61.6859 HILEMNFSKADPPPE-p M0QXA7;S946-p HILEMNFSKADPPPE 0.0869018861060118 0.531209704295689 -0.494333333333333 -0.147 22.6451287665265 3.69417619389947 -0.494333333333334 -0.147 0.00543860006255999 0.427151937508898 -4.47103364198606 -0.858062900862721 M0QXA7 WIZ M0QXA7.S946.p_WIZ M0QXA7_S946s _1_1_946_946 M0QXA7 O95785|M0QXA7|O95785-3|O95785-4|B9EGQ5|O95785-2 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20221.20221.3 11.24 11.24 99 1 1 1 0 552.9584 1576.8922 S946s TMT10 939 (R) HILEMNFsK (A) HILEMNFS(1.0)K K:TMT10,s:Phosphorylated S WIZ 104190.1 1 19 195.1 461.51 HUMAN 1 -22.6451 -3.6942 HILKSLASIEAKCSD-p P28290;S668-p HILKSLASIEAKCSD 0.369943419338104 0.439275660707185 -0.139 -0.105666666666667 8.00913681603699 4.75879841348585 -0.139 -0.105666666666667 0.158156235217473 0.334287516404827 -1.63674557346101 -1.05945993202581 P28290 SSFA2 P28290.S668.p_SSFA2 P28290_S668s _1_1_668_668 P28290 P28290|P28290-3|E9PHV5|P28290-2|E7EUL7 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17186.17186.2 13.49 5.99 4.075 2 1 1 0 678.881 1276.7877 S668s TMT10 665 (K) SLAsIEAK (C) S(0.0)LAS(0.99)IEAK K:TMT10,s:Phosphorylated S SSFA2 139638.7 4 16 73.1 652.35 HUMAN 1 -8.0091 -4.7588 HIPLIDDTDAEDDAP-p P20020;T1203-p HIPLIDDTDAEDDAP 0.297567897584636 0.0643864814799937 0.146 0.249333333333333 9.90104519638872 15.8596855573387 0.146 0.249333333333333 0.102304675073403 0.0259436719554236 1.96452364286869 3.03917039357815 P20020 ATP2B1 P20020.T1203.p_ATP2B1 P20020_T1203t _1_1_1203_1203 P20020 P20020|P20020-4|P20020-3|P20020-6|E7ERY9 Plasma membrane calcium-transporting ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22442.22442.3 15.08 8.5 2.16 3 1 1 0 949.1005 2765.3202 T1203t Hydrogen 1190 (R) IEDSEPHIPLIDDtDAEDDAPTK (R) IEDS(0.0)EPHIPLIDDT(0.99)DAEDDAPT(0.0)K K:TMT10-Lys-Only,t:Phosphorylated T ATP2B1 139722.6 2 7 921.1 200.23 HUMAN 1 9.901 15.8597 HIRATCISPGVVETQ-p Q6UWP2;S197-p HIRATCISPGVVETQ 0.705319541148296 0.214427967317373 0.0653333333333333 0.167666666666667 2.84921738340613 8.7975326448479 0.0653333333333333 0.167666666666667 0.518893537262894 0.131900589191143 0.689616645122126 1.77269344850054 Q6UWP2 DHRS11 Q6UWP2.S197.p_DHRS11 Q6UWP2_S197s _1_1_197_197 Q6UWP2 Q6UWP2|Q6UWP2-2 Dehydrogenase/reductase SDR family member 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29302.29302.3 14.84 14.84 1.725 3 1 1 0 765.0625 2213.204 S197s TMT10 193 (R) ATCIsPGVVETQFAFK (L) AT(0.0)CIS(0.99)PGVVET(0.0)QFAFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DHRS11 28707.2 2 1 5988.1 14.84 HUMAN 1 2.8492 8.7975 HIRHFTDSLKMRKME-p Q03112-3;S1156-p HIRHFTDSLKMRKME 0.0986992178204749 0.894370647501386 -0.409333333333333 0.0223333333333333 21.2766036635768 0.68019352212961 -0.409333333333333 0.0223333333333333 0.00745314608435416 0.855028611860745 -4.15843827384674 0.191597134107684 Q03112 MECOM Q03112.3.S1156.p_MECOM Q03112-3_S1156s _1_1_1156_1156 Q03112-3 Q03112-3 Isoform 2 of MDS1 and EVI1 complex locus protein EVI1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11094.11094.3 9.69 9.69 2.236 2 1 1 0 462.5793 1305.7567 S1156s TMT10 1152 (R) HFTDsLK (M) HFT(0.0)DS(0.99)LK K:TMT10,s:Phosphorylated S MECOM 141074 1 10 937.1 198.37 HUMAN 1 -21.2766 0.6802 HIRIRAKSQGMALSL-p P53618;S933-p HIRIRAKSQGMALSL 0.14666043453421 0.866723347035027 -0.306 -0.0223333333333333 16.9662152897917 0.874803176179639 -0.306 -0.0223333333333333 0.0201084442322828 0.817560089221188 -3.25598357075164 -0.242148938606378 P53618 COPB1 P53618.S933.p_COPB1 P53618_S933s _1_1_933_933 P53618 P53618 Coatomer subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19771.19771.3 12.38 12.38 12.379 2 1 1 0 548.9526 1564.8769 S933s TMT10 933 (K) sQGMALSLGDK (I) S(0.99)QGMALS(0.0)LGDK K:TMT10,s:Phosphorylated S COPB1 108281.4 2 4 3508.1 49.52 HUMAN 1 -16.9662 -0.8748 HIRVFRVTPK_____-p O75817;T138-p HIRVFRVTPK_____ 0.594089683947236 0.180818134332702 -0.0913333333333333 -0.137333333333333 4.1711084105495 9.76900611405227 -0.0913333333333333 -0.137333333333333 0.382727050885116 0.105462822117975 -0.949699048793006 -1.94084091580491 O75817 POP7 O75817.T138.p_POP7 O75817_T138t _1_1_138_138 O75817 O75817 Ribonuclease P protein subunit p20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14248.14248.3 7.71 4.98 99 1 1 1 0 462.275 1304.8455 T138t TMT10 134 (R) VFRVtPK (-) VFRVT(1.0)PK K:TMT10,t:Phosphorylated T POP7 15764.7 1 2 6084.1 14.11 HUMAN 1 -4.1711 -9.769 HISQHCPSPGAPPLE-p Q15562-4;S264-p HISQHCPSPGAPPLE 0.202846697385928 0.269963186059165 -0.232333333333333 -0.132666666666667 13.4300117623078 7.48744776477578 -0.232333333333333 -0.132666666666667 0.0453940387209353 0.178342653273261 -2.5888491666652 -1.54563978903439 Q15562 TEAD2 Q15562.4.S264.p_TEAD2 Q15562-4_S264s _1_1_264_264 Q15562-4 Q15562-4|Q15562-2|Q15562-3 Isoform 4 of Transcriptional enhancer factor TEF-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17890.17890.4 16.64 16.64 2.099 3 1 1 0 747.8755 2908.5089 S264s TMT10 253 (R) HLFVHISQHCPsPGAPPLESVDVR (Q) HLFVHIS(0.0)QHCPS(0.99)PGAPPLES(0.0)VDVR C:Carbamidomethylation,s:Phosphorylated S TEAD2 49981.4 1 5 3010.3 63.35 HUMAN 1 -13.43 -7.4874 HITSEADSDPGNPVE-p Q562F6;S1032-p HITSEADSDPGNPVE 0.182735755275441 0.0088523956357829 0.246333333333333 -0.45 14.5105761467246 29.0966843645876 0.246333333333333 -0.45 0.0353950381960279 0.00123120838215433 2.78715334493107 -6.15255919723501 Q562F6 SGOL2 Q562F6.S1032.p_SGOL2 Q562F6_S1032s _1_1_1032_1032 Q562F6 Q562F6|Q562F6-2 Shugoshin 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14628.14628.3 15.08 15.08 3.712 3 1 1 0 836.4045 2427.2226 S1032s TMT10 1025 (K) HITSEADsDPGNPVELCK (T) HIT(0.0)S(0.0)EADS(0.99)DPGNPVELCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SGO2 145877.6 1 3 3156.1 59.09 HUMAN 1 14.5106 -29.0967 HITSKHASPDKWNDK-p Q96JM3;S87-p HITSKHASPDKWNDK 0.631840261902966 0.931901388642964 -0.081 0.011 3.71311480666021 0.431904639823126 -0.081 0.011 0.425293278817509 0.905335470326745 -0.861878004022492 0.124592044489305 Q96JM3 CHAMP1 Q96JM3.S87.p_CHAMP1 Q96JM3_S87s_1_1_87_87 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8887.8887.5 14.21 14.21 99 1 1 1 0 484.8694 2339.3642 S87s N92n TMT10 85 (K) HAsPDKWnDKPK (N) HAS(1.0)PDKWN(1.0)DKPK K:TMT10,s:Phosphorylated S,n:Deamidated CHAMP1 90067.4 14 1 25.1 950.05 HUMAN 1 -3.7131 0.4319 HKDHFRLTIPRKSKL-p E7EW20;T558-p HKDHFRLTIPRKSKL 0.229053164728184 0.531389300291025 -0.192333333333333 -0.144333333333333 12.3007601737442 3.69166641233271 -0.192333333333333 -0.144333333333333 0.0588740595258818 0.427398859340451 -2.38579747234356 -0.857575366000872 E7EW20 NotFound E7EW20.T558.p_NotFound E7EW20_T558t _1_1_558_558 E7EW20 E7EW20|Q9UM54-5|A0A0A0MRM8 Unconventional myosin-VI HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14249.14249.4 10.52 10.52 99 1 1 1 0 456.0123 1741.0637 T558t TMT10 553 (K) DHFRLtIPRK (S) DHFRLT(1.0)IPRK K:TMT10,t:Phosphorylated T MYO6 151234.9 2 3 1416.1 144.52 HUMAN 1 -12.3008 -3.6917 HKDRRKGSLDVKAVA-p O60658;S359-p HKDRRKGSLDVKAVA 0.0613809554565416 0.00963323639650954 -0.410666666666667 0.699666666666667 26.4122547120866 28.429459485625 -0.410666666666667 0.699666666666667 0.00228441250468524 0.00143566810266488 -5.41058175829773 5.9593533522908 O60658 PDE8A O60658.S359.p_PDE8A O60658_S359s _1_1_359_359 O60658 O60658|O60658-2|O60658-6 High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11263.11263.3 7.81 7.81 99 1 1 1 0 505.3033 1433.9295 S359s TMT10 357 (R) KGsLDVK (A) KGS(1.0)LDVK K:TMT10,s:Phosphorylated S PDE8A 94443.4 2 1 4894.1 25.36 HUMAN 1 -26.4123 28.4295 HKDSDDDSSDDEQEK-p Q13435;S435-p HKDSDDDSSDDEQEK 0.252923021341549 0.0294879159752632 -0.325666666666667 0.465166666666667 11.3851209819586 20.7111105936681 -0.325666666666667 0.465166666666667 0.0726922148970572 0.0084896334727567 -2.22372215113821 4.02930906070581 Q13435 SF3B2 Q13435.S435.p_SF3B2 Q13435_S435sS436s_2_2_435_436 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8099.8099.4 13.59 13.59 4.751 3 2 2 0 976.4582 3742.8904 S435s S436s TMT10 421 (K) KKGFEEEHKDSDDDssDDEQEK (K) KKGFEEEHKDS(0.0)DDDS(0.99)S(0.99)DDEQEK K:TMT10,s:Phosphorylated S SF3B2 100339.9 5 17 193.1 462.57 HUMAN 2 -11.3851 20.7111 HKEAVANSVKKASDD-p Q15147-5;S534-p HKEAVANSVKKASDD 0.199418709267342 0.676023215935099 -0.260333333333333 -0.0656666666666667 13.6187795926759 2.3235594450172 -0.260333333333333 -0.0656666666666667 0.0434632342686949 0.585657966878395 -2.62318837143527 -0.579249979005253 Q15147 PLCB4 Q15147.5.S534.p_PLCB4 Q15147-5_S534s _1_1_534_534 Q15147-5 Q15147-4|Q15147-5|Q15147-2 Isoform 4 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8009.8009.3 9.35 9.35 99 1 1 1 0 571.6684 1633.0252 S534s TMT10 529 (K) EAVANsVKK (A) EAVANS(1.0)VKK K:TMT10,s:Phosphorylated S PLCB4 136983.7 1 4 1968.1 104.91 HUMAN 1 -13.6188 -2.3236 HKEDPSESEEEQIEI-p O15018;S1594-p HKEDPSESEEEQIEI 0.420320976430283 0.0421918828246993 0.151 -0.262333333333333 6.94683787301899 18.4165607904774 0.151 -0.262333333333333 0.201983648478025 0.0143993842455924 1.45170421806026 -3.54407876973659 O15018 PDZD2 O15018.S1594.p_PDZD2 O15018_S1592sS1594s_2_2_1592_1594 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15983.15983.3 16.48 11.3 4.114 5 2 2 0 1074.1572 3060.5196 S1592s S1594s TMT10 1584 (R) VSLHKEDPsEsEEEQIEICSTR (G) VS(0.0)LHKEDPS(0.99)ES(0.99)EEEQIEICS(0.0)T(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PDZD2 304146 2 42 85.1 628.64 HUMAN 1 6.9468 -18.4166 HKEEAPASPLRPLYP-p P85037;S213-p HKEEAPASPLRPLYP 0.0964540928071086 0.00212228854410704 -0.780666666666667 0.865333333333333 21.5367944518918 41.5511342347568 -0.780666666666667 0.865333333333333 0.00701973237015783 6.99659244090176e-05 -4.21680215567029 10.8515272773467 P85037 FOXK1 P85037.S213.p_FOXK1 P85037_S213s _1_1_213_213 P85037 P85037|P85037-2 Forkhead box protein K1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25513.25513.4 18.26 18.26 7.158 3 1 1 0 661.8688 2564.4852 S213s TMT10 208 (K) EEAPAsPLRPLYPQISPLK (I) EEAPAS(0.99)PLRPLY(0.0)PQIS(0.0)PLK K:TMT10,s:Phosphorylated S FOXK1 75912.4 3 2 686.1 243.66 HUMAN 1 -21.5368 41.5511 HKEEDKNSERITVKK-p Q9NYF8;S485-p HKEEDKNSERITVKK 0.285328406473615 0.0113657135901772 -0.395333333333333 0.747 10.279023795343 27.2188632757302 -0.395333333333333 0.747 0.0937772775265849 0.00189720243082113 -2.0302308579353 5.62076108801943 Q9NYF8 BCLAF1 Q9NYF8.S485.p_BCLAF1 Q9NYF8_S485s _1_1_485_485 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6624.6624.5 13.03 13.03 4.636 2 1 1 0 542.7081 2629.5443 S485s TMT10 478 (K) HKEEDKNsERITVK (K) HKEEDKNS(0.99)ERIT(0.0)VK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 1 25 10.1 1293.04 HUMAN 1 -10.279 27.2189 HKEGPRDSITLLDAK-p Q96DY7;S597-p HKEGPRDSITLLDAK 0.224767265517543 0.0270287305178499 -0.260333333333333 -0.316333333333333 12.4547178972806 21.2803313988401 -0.260333333333333 -0.316333333333333 0.0568235300966811 0.00744675147511374 -2.41325840156995 -4.1550613132506 Q96DY7 MTBP Q96DY7.S597.p_MTBP Q96DY7_S597s _1_1_597_597 Q96DY7 Q96DY7 Mdm2-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17735.17735.3 10.49 6.98 1.172 2 1 1 0 651.6885 1873.0795 S597s TMT10 592 (K) EGPRDsITLLDAK (E) EGPRDS(0.99)IT(0.0)LLDAK K:TMT10,s:Phosphorylated S MTBP 103389.4 1 2 2629.1 76.23 HUMAN 1 -12.4547 -21.2803 HKFTVQASPTMDKRK-p P80192-4;S533-p HKFTVQASPTMDKRK 0.497825314913204 0.00360332108061802 -0.114333333333333 -0.683666666666667 5.58134089180736 36.3426527153226 -0.114333333333333 -0.683666666666667 0.276608747920939 0.000232131847805975 -1.20960597934934 -8.6018771546865 P80192 MAP3K9 P80192.4.S533.p_MAP3K9 P80192-4_S533s_1_1_533_533 P80192-4 P80192-4|J3KPI6|A0A087WW79|G3V347|G3V4P9 Isoform 2 of Mitogen-activated protein kinase kinase kinase 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16186.16186.3 8.78 8.78 1.778 3 1 1 0 593.6331 1682.9188 S533s M536m TMT10 528 (K) FTVQAsPTmDK (R) FT(0.0)VQAS(0.99)PT(0.0)M(1.0)DK K:TMT10,s:Phosphorylated S,m:Oxidized methionine MAP3K9 124398 1 1 3610.1 47.07 HUMAN 1 -5.5813 -36.3427 HKIISIFSGTEKGSK-p Q13177;S58-p HKIISIFSGTEKGSK 0.43773303002828 0.505938158887248 -0.130666666666667 -0.064 6.60652763228095 3.96469796185941 -0.130666666666667 -0.064 0.218447579441127 0.401356410367003 -1.39194645614813 -0.910222388062971 Q13177 PAK2 Q13177.S58.p_PAK2 Q13177_S58s _1_1_58_58 Q13177 Q13177 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28581.28581.2 15.05 8.02 1.264 3 1 1 0 816.951 1552.9351 S58s TMT10 53 (K) IISIFsGTEK (G) IIS(0.0)IFS(0.99)GT(0.0)EK K:TMT10,s:Phosphorylated S PAK2 58326.8 4 18 272.1 393.22 HUMAN 1 -6.6065 -3.9647 HKIKSSPSPEVVKPK-p Q15652;S641-p HKIKSSPSPEVVKPK 0.524824849913072 0.989785716330993 -0.167333333333333 -0.00166666666666663 5.18220730838959 0.0676027316822138 -0.167333333333333 -0.00166666666666662 0.303234959612012 0.984554421396787 -1.13734612360476 -0.0202681619040362 Q15652 JMJD1C Q15652.S641.p_JMJD1C Q15652_S641s _1_1_641_641 Q15652 Q15652|Q15652-3|A0A1W2PNZ9|Q15652-2 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11571.11571.3 15.47 15.47 1.532 3 1 1 0 641.3708 1842.1304 S641s TMT10 638 (K) SSPsPEVVKPK (I) S(0.0)S(0.0)PS(0.99)PEVVKPK K:TMT10,s:Phosphorylated S JMJD1C 286573.8 5 9 377.1 336.35 HUMAN 1 -5.1822 -0.0676 HKITVQASPNLDKRR-p A0A1W2PKR9;S528-p HKITVQASPNLDKRR 0.206532146797092 0.206916338028558 -0.207666666666667 -0.144 13.2465065713846 9.0005295613525 -0.207666666666667 -0.144 0.047353201100698 0.125877191281429 -2.55558243023764 -1.80780417064734 A0A1W2PKR9 NotFound A0A1W2PKR9.S528.p_NotFound A0A1W2PKR9_S528s _1_1_528_528 A0A1W2PKR9 Q5TCX8|A0A1W2PKR9|Q5TCX8-2 Mitogen-activated protein kinase kinase kinase 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17694.17694.2 11.31 8.19 10.867 2 1 1 0 862.4754 1643.9732 S528s TMT10 523 (K) ITVQAsPNLDK (R) IT(0.0)VQAS(0.99)PNLDK K:TMT10,s:Phosphorylated S MAP3K21 115095.7 3 2 2799.1 70.16 HUMAN 1 -13.2465 -9.0005 HKITVQASPTLDKRK-p Q02779;S489-p HKITVQASPTLDKRK 0.674176530432026 0.089855968732987 0.0686666666666667 0.261666666666667 3.20929165037355 13.84888959345 0.0686666666666667 0.261666666666667 0.477607166719593 0.0412202897891596 0.762610460960043 2.66363908671844 Q02779 MAP3K10 Q02779.S489.p_MAP3K10 Q02779_S489s _1_1_489_489 Q02779 Q02779 Mitogen-activated protein kinase kinase kinase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18655.18655.3 10 11.1 1.484 3 1 1 0 570.9882 1630.978 S489s TMT10 484 (K) ITVQAsPTLDK (R) IT(0.0)VQAS(0.99)PT(0.0)LDK K:TMT10,s:Phosphorylated S MAP3K10 104434.3 1 1 4708.1 27.66 HUMAN 1 3.2093 13.8489 HKKQKMDSDEDEKEG-p Q96ST2;S377-p HKKQKMDSDEDEKEG 0.340248179816961 0.0344908139321733 -0.211 0.299333333333333 8.70904931677098 19.7012111076305 -0.211 0.299333333333333 0.13461549990428 0.0107122053462669 -1.75799887057498 3.81161958280853 Q96ST2 IWS1 Q96ST2.S377.p_IWS1 Q96ST2_S377s_1_1_377_377 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9643.9643.3 18.28 18.28 99 1 1 1 0 892.7444 2613.2805 Q373q S377s Hydrogen 373 (K) qKMDsDEDEKEGEEEK (V) Q(1.0)KMDS(1.0)DEDEKEGEEEK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S IWS1 92010 18 4 230.1 422.87 HUMAN 1 -8.709 19.7012 HKLDVSRSPPLMVKK-p Q8N264;S415-p HKLDVSRSPPLMVKK 0.549764101123738 0.0176587357769061 -0.171333333333333 0.478333333333333 4.79499263579114 24.1517549898416 -0.171333333333333 0.478333333333333 0.33151313194882 0.00384436399386333 -1.0663519543761 4.82634173421832 Q8N264 ARHGAP24 Q8N264.S415.p_ARHGAP24 Q8N264_S415s _1_1_415_415 Q8N264 Q8N264|Q8N264-2|Q8N264-3 Rho GTPase-activating protein 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20309.20309.3 14.28 10.29 2.276 2 1 1 0 627.3552 1800.0817 S415s TMT10 410 (K) LDVSRsPPLMVK (K) LDVS(0.0)RS(0.99)PPLMVK K:TMT10,s:Phosphorylated S ARHGAP24 84884.4 2 1 5201.1 21.85 HUMAN 1 -4.795 24.1518 HKLGSQVSLVSGSSS-p Q8IX03-2;S144-p HKLGSQVSLVSGSSS 0.918584931739165 0.190881999791248 0.0183333333333333 -0.191333333333333 0.718069697490806 9.45942571539902 0.0183333333333333 -0.191333333333333 0.847604063803095 0.113255011487113 0.201583000383202 -1.88720967249639 Q8IX03 WWC1 Q8IX03.2.S144.p_WWC1 Q8IX03-2_S144s _1_1_144_144 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27778.27778.5 22.91 21.18 1.168 10 1 1 0 810.6499 3969.2566 S144s TMT10 139 (K) LGSQVsLVSGSSSSSKYDPEILKAEIATAK (S) LGS(0.0)QVS(0.99)LVS(0.0)GS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)KY(0.0)DPEILKAEIAT(0.0)AK K:TMT10,s:Phosphorylated S WWC1 126701.1 3 2 312.1 370.85 HUMAN 1 0.7181 -9.4594 HKLTKAASLPGKNGN-p Q92545;S1649-p HKLTKAASLPGKNGN 0.122554525096102 0.0149209176257738 -0.355666666666667 -0.37 18.9834747281777 25.2758429537404 -0.355666666666667 -0.37 0.0126372485466124 0.00296767067077754 -3.66410928438454 -5.10751358971316 Q92545 TMEM131 Q92545.S1649.p_TMEM131 Q92545_S1649s _1_1_1649_1649 Q92545 Q92545 Transmembrane protein 131 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11603.11603.2 10.13 10.13 99 1 1 1 0 591.3384 1101.7032 S1649s TMT10 1647 (K) AAsLPGK (N) AAS(1.0)LPGK K:TMT10,s:Phosphorylated S TMEM131 205932.9 2 9 789.1 224.94 HUMAN 1 -18.9835 -25.2758 HKPERSVSPESNDSI-p Q8NCN4;S368-p HKPERSVSPESNDSI 0.817061478343184 0.00195162346428314 -0.0486666666666667 -0.862333333333333 1.68614049513252 42.3874269176044 -0.0486666666666667 -0.862333333333334 0.678243984332064 5.77108283843083e-05 -0.438116444126741 -11.2591163160824 Q8NCN4 RNF169 Q8NCN4.S368.p_RNF169 Q8NCN4_S368sT391t_2_2_368_391 Q8NCN4 Q8NCN4 E3 ubiquitin-protein ligase RNF169 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26494.26494.5 8.46 8.46 1.174 7 2 2 0 821.7949 3943.0185 S368s N372n N380n T391t TMT10 366 (R) SVsPESnDSISEELnHFKPIVCSPCtPPK (R) S(0.0)VS(0.99)PES(0.0)N(1.0)DS(0.0)IS(0.0)EELN(1.0)HFKPIVCS(0.0)PCT(0.99)PPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T RNF169 78277 9 15 729.1 236.14 HUMAN 2 -1.6861 -42.3874 HKQALVGSDSAEDEK-p O43159;S124-p HKQALVGSDSAEDEK 0.58310033446133 0.0450475397467531 -0.138333333333333 0.312333333333333 4.30951693899543 18.0211373135561 -0.138333333333333 0.312333333333333 0.370721954487128 0.0157719818506569 -0.975850706559369 3.46370448979725 O43159 RRP8 O43159.S124.p_RRP8 O43159_S124s _1_1_124_124 O43159 O43159|E9PPY3 Ribosomal RNA-processing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12139.12139.2 15.07 15.07 2.588 2 1 1 0 943.9607 1806.9485 S124s TMT10 119 (K) QALVGsDSAEDEK (R) QALVGS(0.99)DS(0.0)AEDEK K:TMT10,s:Phosphorylated S RRP8 51455.6 1 2 986.1 191.95 HUMAN 1 -4.3095 18.0211 HKSDSPESDAEREKD-p O75400;S888-p HKSDSPESDAEREKD 0.49037470054297 0.171529589330938 -0.155 -0.167333333333333 5.70379401411951 10.0651756316795 -0.155 -0.167333333333333 0.268918449502988 0.0985104803681777 -1.23161186967849 -1.99222444852548 O75400 PRPF40A O75400.S888.p_PRPF40A O75400_S888s _1_1_888_888 O75400 O75400|O75400-3|O75400-2 Pre-mRNA-processing factor 40 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4536.4536.4 14.27 14.27 1.124 3 1 1 0 596.3042 2302.2242 S888s TMT10 881 (R) HKSDSPEsDAEREK (D) HKS(0.0)DS(0.0)PES(0.99)DAEREK K:TMT10,s:Phosphorylated S PRPF40A 109088.4 8 9 718.2 237.38 HUMAN 1 -5.7038 -10.0652 HKSNSPESETDPEEK-p F8VU11;S819-p HKSNSPESETDPEEK 0.103884021690019 0.0423677491977485 -0.571333333333333 0.538 20.7557397930133 18.3914560633824 -0.571333333333333 0.538 0.00840283857900012 0.0144828620379669 -4.04305031378983 3.53894922200105 F8VU11 PRPF40B F8VU11.S819.p_PRPF40B F8VU11_S816sS819sT821t_3_3_816_821 F8VU11 F8VU11|Q6NWY9|Q6NWY9-3|Q6NWY9-2 PRP40 pre-mRNA processing factor 40 homolog B (Yeast), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7745.7958.3 8.04 8.04 1.153 4 3 3 0 716.2803 1906.9282 S816s S819s T821t TMT10 814 (K) SNsPEsEtDPEEK (A) S(0.0)NS(0.99)PES(0.99)ET(0.99)DPEEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T PRPF40B 101691.8 2 7 1236.1 163.46 HUMAN 1 -20.7557 18.3915 HKTLPKMSGGWELEL-p Q07021;S106-p HKTLPKMSGGWELEL 0.955641444333664 0.0824010176748548 0.00933333333333333 0.211666666666667 0.387983854957713 14.3627253551981 0.00933333333333333 0.211666666666667 0.914537702938569 0.0366207693932238 0.112427168408583 2.75805546304862 Q07021 C1QBP Q07021.S106.p_C1QBP Q07021_S106s _1_1_106_106 Q07021 Q07021 Complement component 1 Q subcomponent-binding protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26030.26030.4 11.73 11.73 2.33 3 1 1 0 707.8788 2748.5209 S106s TMT10 101 (K) TLPKMsGGWELELNGTEAK (L) T(0.0)LPKMS(0.99)GGWELELNGT(0.0)EAK K:TMT10,s:Phosphorylated S C1QBP 31761 1 1 4057.1 38.47 HUMAN 1 0.388 14.3627 HKTPRRDSSGGTKDG-p Q9Y478;S24-p HKTPRRDSSGGTKDG 0.0832139716415161 0.0322988532481283 1.605 -0.831 23.061696916712 20.1181002798499 1.605 -0.831 0.00494117582941259 0.00973172822491361 4.56902765763904 -3.90066436578963 Q9Y478 PRKAB1 Q9Y478.S24.p_PRKAB1 Q9Y478_S24s _1_1_24_24 Q9Y478 Q9Y478|F5H4Y8 5'-AMP-activated protein kinase subunit beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3277.3277.3 11.19 11.19 1.24 3 1 1 0 748.3956 2163.2085 S24s TMT10 22 (R) RDsSGGTKDGDRPK (I) RDS(0.99)S(0.0)GGT(0.0)KDGDRPK K:TMT10,s:Phosphorylated S PRKAB1 30552.9 3 1 1669.1 122.33 HUMAN 1 23.0617 -20.1181 HKTTGSPSDEEPEVL-p Q8IWY7;S984-p HKTTGSPSDEEPEVL 0.255498822846135 0.126512232474824 -0.222333333333333 0.184 11.2719988339516 11.8367807679175 -0.222333333333333 0.184 0.0746105285516754 0.0655121606677028 -2.20383153622064 2.30228669461123 Q8IWY7 TTBK2 Q8IWY7.S984.p_TTBK2 Q8IWY7_S984s _1_1_984_984 Q8IWY7 Q8IWY7|Q6IQ55|Q6IQ55-2 Tau-tubulin kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29306.29306.4 9.44 9.44 1.892 5 1 1 0 781.6307 3043.5359 S984s TMT10 979 (K) TTGSPsDEEPEVLQVLEASPQDEK (L) T(0.0)T(0.0)GS(0.0)PS(0.99)DEEPEVLQVLEAS(0.0)PQDEK K:TMT10,s:Phosphorylated S TTBK2 184004.2 1 3 1983.1 104.1 HUMAN 1 -11.272 11.8368 HKVANRISDPNLPPR-p Q9UKE5;S560-p HKVANRISDPNLPPR 0.819486223186259 0.169333678362429 0.041 -0.172333333333333 1.66500646042791 10.1406884290504 0.041 -0.172333333333333 0.68155256086983 0.0968124380266783 0.433267389103319 -2.0053399628229 Q9UKE5 TNIK Q9UKE5.S560.p_TNIK Q9UKE5_S560s _1_1_560_560 Q9UKE5 Q9UKE5|Q9UKE5-4|Q9UKE5-2|Q9UKE5-6 TRAF2 and NCK-interacting protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17957.17957.4 15.66 7.56 5.433 5 1 1 0 776.6525 3023.6224 S560s TMT10 555 (K) VANRIsDPNLPPRSESFSISGVQPAR (T) VANRIS(0.99)DPNLPPRS(0.0)ES(0.0)FS(0.0)IS(0.0)GVQPAR s:Phosphorylated S TNIK 155453.9 6 33 131.1 535.29 HUMAN 1 1.665 -10.1407 HKVIMVGSGGVGKSA-p P11233;S22-p HKVIMVGSGGVGKSA 0.896926033044342 0.34237479694132 -0.0223333333333333 0.091 0.925753851527092 6.16577660061606 -0.0223333333333333 0.091 0.808024659429511 0.241781094897718 -0.25514945096526 1.31372137318987 P11233 RALA P11233.S22.p_RALA P11233_S22s _1_1_22_22 P11233 P11234-2|P11234-3|P11233|F8WEQ6 Ras-related protein Ral-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20064.20064.3 12.97 10.93 99 1 1 1 0 514.6232 1461.8863 S22s TMT10 17 (K) VIMVGsGGVGK (S) VIMVGS(1.0)GGVGK K:TMT10,s:Phosphorylated S RALA 23737.5 2 2 4287.1 34.16 HUMAN 1 -0.9258 6.1658 HKVPVLISPTLKHTP-p P42684-6;S915-p HKVPVLISPTLKHTP 0.198300279868763 0.0516125847155946 -0.373 -0.266333333333333 13.6933043070685 17.1778240476163 -0.373 -0.266333333333333 0.0427237700867953 0.0191521526794891 -2.63677922667724 -3.29519741912597 P42684 ABL2 P42684.6.S915.p_ABL2 P42684-6_S915s _1_1_915_915 P42684-6 P42684|P42684-3|P42684-6|P42684-2|P42684-5|P42684-10 Isoform 6 of Abelson tyrosine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21168.21168.5 18.37 18.37 1.263 4 1 1 0 620.9721 3020.8592 S915s TMT10 898 (K) AAPVLPTTHNHKVPVLIsPTLK (H) AAPVLPT(0.0)T(0.0)HNHKVPVLIS(0.99)PT(0.0)LK K:TMT10,s:Phosphorylated S ABL2 127186.4 3 12 615.1 261.3 HUMAN 1 -13.6933 -17.1778 HKVQRSVSANPKQRR-p E9PC69;S400-p HKVQRSVSANPKQRR 0.132506536300977 0.655622178076439 0.531333333333333 0.0626666666666667 18.1180768898396 2.5061558850252 0.531333333333333 0.0626666666666667 0.0154238328832149 0.561544801988897 3.48620128004052 0.618110485068506 E9PC69 NotFound E9PC69.S400.p_NotFound E9PC69_S400s _1_1_400_400 E9PC69 Q7KZI7|Q7KZI7-8|E9PC69|Q7KZI7-11|Q7KZI7-6|Q7KZI7-3|Q7KZI7-14|Q7KZI7-12|Q7KZI7-9|Q7KZI7-4|Q7KZI7-16|Q7KZI7-5|Q7KZI7-15|Q7KZI7-2|E7ETY4 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7156.7156.2 11.08 4.79 2.894 2 1 1 0 620.84 1160.7039 S400s TMT10 398 (R) SVsANPK (Q) S(0.0)VS(0.99)ANPK K:TMT10,s:Phosphorylated S MARK2 87089.2 2 5 200.1 451.67 HUMAN 1 18.1181 2.5062 HKVSFLRSGTKLIFR-p O14523;S642-p HKVSFLRSGTKLIFR 0.906665267605411 0.00855566836817945 0.021 -0.709 0.834898470569302 29.338528887995 0.021 -0.709 0.825106774612189 0.00116452042766656 0.231935802076707 -6.22378709361697 O14523 C2CD2L O14523.S642.p_C2CD2L O14523_S642s _1_1_642_642 O14523 O14523-2 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15224.15224.3 8.65 8.65 8.65 3 1 1 0 511.6256 1452.8939 S642s TMT10 637 (K) VSFLRsGTK (L) VS(0.0)FLRS(0.99)GT(0.0)K K:TMT10,s:Phosphorylated S C2CD2L 76636.4 1 14 411.1 322.51 HUMAN 1 0.8349 -29.3385 HKYVSGSSPDLVTRK-p Q15678;S594-p HKYVSGSSPDLVTRK 0.724309472221847 0.0124943875935368 0.064 0.400666666666667 2.65135065279696 26.5547416862367 0.064 0.400666666666667 0.543081407288843 0.00221067974128133 0.648662235810428 5.44128370008619 Q15678 PTPN14 Q15678.S594.p_PTPN14 Q15678_S593sS594s_2_2_593_594 Q15678 Q15678 Tyrosine-protein phosphatase non-receptor type 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15676.15676.3 10.38 10.38 2.148 5 2 2 0 676.3389 1867.0689 S593s S594s TMT10 589 (K) YVSGssPDLVTRK (V) Y(0.0)VS(0.0)GS(0.99)S(0.99)PDLVT(0.0)RK K:TMT10,s:Phosphorylated S PTPN14 136114.4 5 18 337.1 355.06 HUMAN 1 2.6514 26.5547 HLAVKHFSVEGQLEF-p P07900;S330-p HLAVKHFSVEGQLEF 0.540250599713126 0.141739706695822 -0.0986666666666667 0.157 4.93511458309436 11.1801609503316 -0.0986666666666667 0.157 0.320987811452795 0.0762050767760857 -1.09215397936229 2.18669798197639 P07900 HSP90AA1 P07900.S330.p_HSP90AA1 P07900_S330s _1_1_330_330 P07900 P07900-2|P08238|Q58FF7|Q58FG1|Q14568 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18438.18647.3 13.86 9.82 99 1 1 1 0 553.2689 1577.8274 S330s TMT10 328 (K) HFsVEGQLEFR (A) HFS(1.0)VEGQLEFR s:Phosphorylated S HSP90AA1 85057.6 3 10 43.1 810.87 HUMAN 1 -4.9351 11.1802 HLDRAKNSPPQAPST-p Q8N1F8;S772-p HLDRAKNSPPQAPST 0.688232276873008 0.312714944476392 0.056 0.099 3.04707635494214 6.67287935095562 0.0550593272472855 0.099 0.495783837268039 0.215135492410805 0.729957923122553 1.40325230000513 Q8N1F8 STK11IP Q8N1F8.S772.p_STK11IP Q8N1F8_S772s _1_1_772_772 Q8N1F8 Q8N1F8|C9JQV3 Serine/threonine-protein kinase 11-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5127.5545.3 13.13 6.78 2.447 3 1 1 0 597.9895 1711.9855 S772s TMT10 769 (R) AKNsPPQAPSTR (D) AKNS(0.99)PPQAPS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S STK11IP 122825.3 11 9 813.1 220.97 HUMAN 1 3.0471 6.6729 HLDSTRGSVHSLDAG-p Q15276;S374-p HLDSTRGSVHSLDAG 0.957143776116471 0.0149080933883694 0.00833333333333332 0.434333333333333 0.373679617211004 25.2834021686633 0.00833333333333332 0.434333333333333 0.917554856614982 0.00296250971448933 0.108439248601778 5.10944213425218 Q15276 RABEP1 Q15276.S374.p_RABEP1 Q15276_S374sS377s_2_2_374_377 Q15276 Q15276|Q15276-2 Rab GTPase-binding effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.31711.31711.3 12.47 12.47 12.473 4 2 2 0 872.4372 2455.3597 S374s S377s TMT10 373 (R) GsVHsLDAGLLLPSGDPFSK (S) GS(0.99)VHS(0.99)LDAGLLLPS(0.0)GDPFS(0.0)K K:TMT10,s:Phosphorylated S RABEP1 99688.1 1 11 933.1 198.92 HUMAN 1 0.3737 25.2834 HLEDDDFSENEKQLA-p Q8IWI9-4;S2910-p HLEDDDFSENEKQLA 0.868580213822128 0.174843309802328 -0.0253333333333333 0.143 1.19491922855703 9.96010217206546 -0.0253333333333334 0.143 0.759465547313764 0.100922914268521 -0.322081697566749 1.97398498197022 Q8IWI9 MGA Q8IWI9.4.S2910.p_MGA Q8IWI9-4_S2910s_1_1_2910_2910 Q8IWI9-4 Q8IWI9|Q8IWI9-3|Q8IWI9-4 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31971.31971.3 9.51 9.51 1.385 4 1 1 0 1270.6125 3728.8431 S2910s N2912n TMT10 2886 (K) ELPDVQGESDSISPLLLHLEDDDFsEnEK (Q) ELPDVQGES(0.0)DS(0.0)IS(0.0)PLLLHLEDDDFS(0.99)EN(1.0)EK K:TMT10,s:Phosphorylated S,n:Deamidated MGA 338321.5 6 23 141.1 523.06 HUMAN 1 -1.1949 9.9601 HLEELDKSHLEGELR-p Q9Y618;S2088-p HLEELDKSHLEGELR 0.610444527145548 0.0122197966070676 -0.226333333333333 -0.798 3.97036711968601 26.7073275087077 -0.226333333333333 -0.798 0.400832832821103 0.00213435791584597 -0.911461016602484 -5.4821380880519 Q9Y618 NCOR2 Q9Y618.S2088.p_NCOR2 Q9Y618_S2088s _1_1_2088_2088 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7|Q9Y618-2 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17301.17301.5 19.97 19.97 99 1 1 1 0 560.3096 2717.5553 S2088s TMT10 2081 (K) HLEELDKsHLEGELRPK (Q) HLEELDKS(1.0)HLEGELRPK K:TMT10,s:Phosphorylated S NCOR2 275540.8 2 32 16.1 1053.89 HUMAN 1 -3.9704 -26.7073 HLELRNRTPAAVREL-p Q92688;T15-p HLELRNRTPAAVREL 0.339525591713079 0.177940770171769 0.154666666666667 0.275333333333333 8.72834280247692 9.86181648907341 0.154666666666667 0.275333333333333 0.134018798393403 0.103232953116661 1.76133867195808 1.95693389254058 Q92688 ANP32B Q92688.T15.p_ANP32B Q92688_T15t _1_1_15_15 Q92688 Q92688|Q92688-2 Acidic leucine-rich nuclear phosphoprotein 32 family member B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3582.3582.3 8.96 5.34 99 1 1 1 0 398.55 1113.669 T15t TMT10 13 (R) NRtPAAVR (E) NRT(1.0)PAAVR t:Phosphorylated T ANP32B 28958.4 1 5 3539.2 48.78 HUMAN 1 8.7283 9.8618 HLELRNRTPSDVKEL-p H0YN26;T15-p HLELRNRTPSDVKEL 0.169335258543165 0.00421329698509664 0.217666666666667 0.639 15.3851781728853 34.9485075605157 0.217666666666667 0.639 0.0289389109036609 0.000319999458895558 2.95100869311693 8.07527640548706 H0YN26 NotFound H0YN26.T15.p_NotFound H0YN26_T15t _1_1_15_15 H0YN26 H0YN26|O95626|H7BZ09 Acidic leucine-rich nuclear phosphoprotein 32 family member A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4299.4299.2 9.79 3.7 1.447 2 1 1 0 727.8921 1374.8105 T15t TMT10 13 (R) NRtPSDVK (E) NRT(0.99)PS(0.0)DVK K:TMT10,t:Phosphorylated T ANP32A 20111 4 1 3539.1 48.78 HUMAN 1 15.3852 34.9485 HLEMETRSILHQGIT-p H3BMM1;S383-p HLEMETRSILHQGIT 0.179935774950283 0.362634117704378 0.217 0.105 14.6977520354571 5.84192258650742 0.217 0.105 0.0339019591667338 0.260500008225807 2.82195419269819 1.25606028333646 H3BMM1 NotFound H3BMM1.S383.p_NotFound H3BMM1_T381tS383sT390t_3_3_381_390 H3BMM1 H3BMM1 Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19088.19088.4 7.04 7.04 7.044 4 3 3 0 828.4253 3070.7712 T381t S383s T390t TMT10 371 (K) LLSHIHLEMEtRsILHQGItRK (N) LLS(0.0)HIHLEMET(0.99)RS(0.99)ILHQGIT(0.99)RK K:TMT10,t:Phosphorylated T,s:Phosphorylated S MYO9A 151307 1 23 457.2 306.95 HUMAN 1 14.6978 5.8419 HLENATEYATLRFPQ-p Q96A22;Y103-p HLENATEYATLRFPQ 0.18805512807753 0.0119158132511985 0.217333333333333 0.428333333333333 14.2397731805765 26.884516963871 0.217333333333333 0.428333333333333 0.0376723473645543 0.00204902993690758 2.73704844177996 5.52986403361019 Q96A22 C11orf52 Q96A22.Y103.p_C11orf52 Q96A22_Y103y _1_1_103_103 Q96A22 Q96A22 Uncharacterized protein C11orf52 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.12499.12898.3 30.02 30.02 2.095 3 1 1 0 654.9934 1882.9973 Y103y TMT10 94 (K) HVHLENATEyATLR (F) HVHLENAT(0.0)EY(0.99)AT(0.0)LR y:Phosphorylated Y C11orf52 14148.5 18 2 11.1 96.16 HUMAN 1 14.2398 26.8845 HLENDPGSNEDTDIP-p O43396;S113-p HLENDPGSNEDTDIP 0.222294886715951 0.366770624313887 0.244666666666667 -0.118 12.5694056617593 5.77692977827916 0.244666666666667 -0.118 0.0553425841155419 0.264427745458146 2.4337578510292 -1.24443586227202 O43396 TXNL1 O43396.S113.p_TXNL1 O43396_S113s _1_1_113_113 O43396 O43396 Thioredoxin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13380.13380.3 21.04 16.09 2.12 2 1 1 0 973.1694 2837.5248 S113s TMT10 103 (K) IKQHLENDPGsNEDTDIPK (G) IKQHLENDPGS(0.99)NEDT(0.0)DIPK K:TMT10,s:Phosphorylated S TXNL1 32650.1 11 1 3504.1 49.56 HUMAN 1 12.5694 -5.7769 HLGDSGGTPVKTRRH-p Q86TI0-2;T746-p HLGDSGGTPVKTRRH 0.963046342073043 0.00385203903768179 -0.00766666666666668 -0.685333333333333 0.315115022345752 35.7206856778115 -0.00766666666666667 -0.685333333333333 0.930011883180357 0.000267874536267272 -0.0919949176826518 -8.36334396710676 Q86TI0 TBC1D1 Q86TI0.2.T746.p_TBC1D1 Q86TI0-2_T746t _1_1_746_746 Q86TI0-2 Q86TI0|Q86TI0-2 Isoform 2 of TBC1 domain family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7247.7247.3 20.13 20.13 2.29 2 1 1 0 597.6461 1710.9539 T746t TMT10 737 (K) ANHLGDSGGtPVK (T) ANHLGDS(0.0)GGT(0.99)PVK K:TMT10,t:Phosphorylated T TBC1D1 132688.3 3 12 587.1 264.9 HUMAN 1 -0.3151 -35.7207 HLGLDSDSESELVID-p Q9ULU4-19;S736-p HLGLDSDSESELVID 0.24333175644278 0.0935328660591543 0.169666666666667 0.195333333333333 11.7358365785466 13.6098018125003 0.169666666666667 0.195333333333333 0.0670527111073648 0.0435531748443913 2.28556513524438 2.62003354795139 Q9ULU4 ZMYND8 Q9ULU4.19.S736.p_ZMYND8 Q9ULU4-19_S734sS736s_2_2_734_736 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-18|Q9ULU4-3|Q9ULU4-4 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22754.22754.5 23.01 23.01 1.153 7 2 2 0 894.8135 4310.1061 S734s S736s TMT10 719 (K) GKDETDSPTVHLGLDsDsESELVIDLGEDHSGREGR (K) GKDET(0.0)DS(0.0)PT(0.0)VHLGLDS(0.99)DS(0.99)ES(0.0)ELVIDLGEDHS(0.0)GREGR K:TMT10,s:Phosphorylated S ZMYND8 139738.7 8 27 57.1 712.18 HUMAN 1 11.7358 13.6098 HLIDHQISSGENTRS-p A0A0A0MT33;S857-p HLIDHQISSGENTRS 0.406507079477698 0.052056300842888 0.178333333333333 0.248666666666667 7.21999979769654 17.1287629893507 0.178333333333333 0.248666666666667 0.189670600956368 0.0193697359788697 1.49947072631723 3.28551167985656 A0A0A0MT33 SCAF8 A0A0A0MT33.S857.p_SCAF8 A0A0A0MT33_S857s _1_1_857_857 A0A0A0MT33 A0A0A0MT33|Q9UPN6-2 Protein SCAF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12345.12381.3 17.04 17.04 1.216 3 1 1 0 704.6862 2032.0773 S857s TMT10 848 (K) VPHLIDHQIsSGENTR (S) VPHLIDHQIS(0.99)S(0.0)GENT(0.0)R s:Phosphorylated S SCAF8 149312.7 1 5 2085.1 98.15 HUMAN 1 7.22 17.1288 HLKAPKISMPEVDLN-p Q09666;S4130-p HLKAPKISMPEVDLN 0.198733336721893 0.827366761482154 -0.220333333333333 0.038 13.6615005781531 1.15219915083283 -0.220333333333333 0.038 0.0430377880250862 0.766973016439094 -2.63097689757758 0.311600648677668 Q09666 AHNAK Q09666.S4130.p_AHNAK Q09666_S4130s _1_1_4130_4130 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29881.29881.3 14.71 10.31 99 1 1 1 0 599.6628 1716.997 S4130s TMT10 4129 (K) IsMPEVDLNLK (G) IS(1.0)MPEVDLNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 4 94 1.1 4313.36 HUMAN 1 -13.6615 1.1522 HLKKIPKSPLRNPLQ-p P15822;S65-p HLKKIPKSPLRNPLQ 0.30796540365421 0.0070163622490788 -0.201 -0.677333333333333 9.55975350375662 30.8669082861565 -0.201 -0.677333333333333 0.110668659535526 0.000819047655277624 -1.90531530806394 -6.68927197210272 P15822 HIVEP1 P15822.S65.p_HIVEP1 P15822_S65s _1_1_65_65 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15435.15435.4 14.17 14.17 99 1 1 1 0 647.4062 2506.6367 S65s TMT10 61 (K) KIPKsPLRNPLQAK (H) KIPKS(1.0)PLRNPLQAK K:TMT10,s:Phosphorylated S HIVEP1 299483.8 4 1 82.1 631.69 HUMAN 1 -9.5598 -30.8669 HLKLQAFSAAIESCN-p Q02790;S336-p HLKLQAFSAAIESCN 0.984880457815387 0.226208653094804 0.00499999999999999 0.133333333333333 0.133931135891314 8.50077322439549 0.00500000000000001 0.133333333333333 0.96963188094107 0.141228607671075 0.0398628833516937 1.72135845404208 Q02790 FKBP4 Q02790.S336.p_FKBP4 Q02790_S336s _1_1_336_336 Q02790 Q02790 Peptidyl-prolyl cis-trans isomerase FKBP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23257.23257.3 16.4 18.1 5.669 2 1 1 0 659.6697 1897.0254 S336s TMT10 332 (K) LQAFsAAIESCNK (A) LQAFS(0.99)AAIES(0.0)CNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FKBP4 52088.9 1 11 706.1 239.22 HUMAN 1 0.1339 8.5008 HLLQEARSPDPGIVP-p J3KNL6;S2022-p HLLQEARSPDPGIVP 0.131133770128844 0.0117222305801838 0.268 0.402 18.239997315245 27.0032079985722 0.268 0.402 0.0149968576258937 0.00199378902081698 3.51099995457512 5.56200546906107 J3KNL6 SEC16A J3KNL6.S2022.p_SEC16A J3KNL6_S2022s _1_1_2022_2022 J3KNL6 J3KNL6|F1T0I1|O15027-5 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27212.27212.5 27.09 27.09 18.431 6 1 1 0 1037.7288 5104.638 S2022s TMT10 2015 (R) HLLQEARsPDPGIVPQEAPVGNSLSELSEENFDGKFANLTPSR (T) HLLQEARS(0.99)PDPGIVPQEAPVGNS(0.0)LS(0.0)ELS(0.0)EENFDGKFANLT(0.0)PS(0.0)R K:TMT10,s:Phosphorylated S SEC16A 253486.5 12 37 15.1 1143.82 HUMAN 1 18.24 27.0032 HLMSTVRSPTASESR-p Q8NFG4;S571-p HLMSTVRSPTASESR 0.1560557092084 0.0123889155351711 -0.291333333333333 -0.586 16.2017411621862 26.6122469682201 -0.291333333333333 -0.586 0.0239787137790209 0.00218160089537888 -3.10702314045173 -5.45665411447538 Q8NFG4 FLCN Q8NFG4.S571.p_FLCN Q8NFG4_S571s _1_1_571_571 Q8NFG4 Q8NFG4 Folliculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6651.6651.3 10.8 10.8 1.112 7 1 1 0 685.6677 1975.0228 S571s TMT10 563 (K) SHLMSTVRsPTASESR (N) S(0.0)HLMS(0.0)T(0.0)VRS(0.99)PT(0.0)AS(0.0)ES(0.0)R s:Phosphorylated S FLCN 65442.1 4 6 1292.1 157.11 HUMAN 1 -16.2017 -26.6122 HLMVRLNSVGQPVFL-p Q9BUU2;S40-p HLMVRLNSVGQPVFL 0.301007467611603 1 0.287666666666667 1.85037170770859e-17 9.79033311412871 1.44649119982993e-15 0.287666666666667 3.20493781063927e-17 0.104946192935557 1 1.94530611451135 4.26704160640066e-16 Q9BUU2 METTL22 Q9BUU2.S40.p_METTL22 Q9BUU2_S40s _1_1_40_40 Q9BUU2 Q9BUU2|H3BTF5|Q9BUU2-2 Methyltransferase-like protein 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30506.30506.3 10.03 10.03 5.86 2 1 1 0 701.3857 2022.1788 S40s TMT10 38 (R) LNsVGQPVFLSQFK (L) LNS(0.99)VGQPVFLS(0.0)QFK K:TMT10,s:Phosphorylated S METTL22 44884.7 1 1 4651.1 28.35 HUMAN 1 9.7903 0 HLPFEGGSLLQIPVK-p Q9Y6M7-13;S1061-p HLPFEGGSLLQIPVK 0.47334504599804 0.138414278259473 0.118 -0.166 5.98300333657227 11.3136199977945 0.118 -0.166 0.252173627825937 0.0738989044817005 1.28153516190965 -2.21011747657351 Q9Y6M7 SLC4A7 Q9Y6M7.13.S1061.p_SLC4A7 Q9Y6M7-13_S1061s _1_1_1061_1061 Q9Y6M7-13 Q9Y6M7-7|Q9Y6M7-8|E9PFN4|Q9Y6M7-12|A0A0A0MST8|Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-9|Q9Y6M7-2|Q9Y6M7-3|Q9Y6M7-4|Q9Y6M7-5 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34813.35441.4 20.95 14.83 11.144 2 1 1 0 802.1613 3125.6593 S1061s TMT10 1045 (R) MLQDDDDTVHLPFEGGsLLQIPVK (A) MLQDDDDT(0.0)VHLPFEGGS(0.99)LLQIPVK K:TMT10,s:Phosphorylated S SLC4A7 128884.6 16 13 207.1 445.25 HUMAN 1 5.983 -11.3136 HLPGSAPSWPSLVDT-p Q6UN15;S440-p HLPGSAPSWPSLVDT 0.529276501737613 0.0806317425856532 0.0906666666666667 0.489333333333333 5.11271423049728 14.5023684708458 0.0906666666666667 0.489333333333333 0.308126163789407 0.0354619940757078 1.1246740250909 2.7838873713531 Q6UN15 FIP1L1 Q6UN15.S440.p_FIP1L1 Q6UN15_S440s _1_1_440_440 Q6UN15 Q6UN15|Q6UN15-5|Q6UN15-3 Pre-mRNA 3'-end-processing factor FIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.33788.34023.4 22.78 22.78 1.27 6 1 1 0 845.9339 3300.7458 S440s TMT10 423 (R) AFPYGNVAFPHLPGSAPsWPSLVDTSK (Q) AFPY(0.0)GNVAFPHLPGS(0.0)APS(0.99)WPS(0.0)LVDT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S FIP1L1 66639.3 1 10 404.1 326.66 HUMAN 1 5.1127 14.5024 HLPLLPESEEEDEME-p Q96SW2-2;S24-p HLPLLPESEEEDEME 0.921583751108816 0.0126478671617105 -0.0186666666666667 0.376 0.695595236315988 26.4596434072533 -0.0186666666666667 0.376 0.852001729530176 0.00225962129675171 -0.195676215333665 5.41593506517097 Q96SW2 CRBN Q96SW2.2.S24.p_CRBN Q96SW2-2_S24s _1_1_24_24 Q96SW2-2 Q96SW2-2 Isoform 2 of Protein cereblon HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23475.23475.4 11.3 7.54 9.733 2 1 1 0 1134.2354 4453.918 S24s Hydrogen 1 (-) MAGEGDQQDAAHNMGNHLPLLPEsEEEDEMEVEDQDSK (E) MAGEGDQQDAAHNMGNHLPLLPES(0.99)EEEDEMEVEDQDS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S CRBN 51386.7 5 3 3708.1 44.8 HUMAN 1 -0.6956 26.4596 HLPNRVGSGAYEQVV-p Q5T8I3;S350-p HLPNRVGSGAYEQVV 0.257518332951923 0.0664089348971913 -0.251666666666667 -0.231333333333333 11.1957987508051 15.664861548095 -0.251666666666667 -0.231333333333333 0.0759311757836708 0.0271340015323411 -2.19044772175564 -3.00203508685813 Q5T8I3 FAM102B Q5T8I3.S350.p_FAM102B Q5T8I3_S350s _1_1_350_350 Q5T8I3 Q5T8I3 Protein FAM102B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13265.13265.3 11.27 11.27 11.268 2 1 1 0 572.3103 1634.9427 S350s Hydrogen 348 (R) VGsGAYEQVVIKR (-) VGS(0.99)GAY(0.0)EQVVIKR K:TMT10-Lys-Only,s:Phosphorylated S FAM102B 39935.3 1 5 3018.1 63.12 HUMAN 1 -11.1958 -15.6649 HLQADNFYQTV____-p Q9NZV1;Y1033-p HLQADNFYQTV____ 0.142109681552459 0.33228667402926 0.373333333333333 0.0986666666666667 17.3192870390066 6.33965195738928 0.373333333333333 0.0986666666666667 0.0185383593403362 0.2322922947415 3.32578808701352 1.34451491812301 Q9NZV1 CRIM1 Q9NZV1.Y1033.p_CRIM1 Q9NZV1_Y1033y _1_1_1033_1033 Q9NZV1 Q9NZV1 Cysteine-rich motor neuron 1 protein GG20160819_MSz_CCLE_T4D7_pY_Injection_01.16125.16169.2 25.33 25.33 11.434 2 1 1 0 943.9352 1806.8972 Y1033y TMT10 1024 (K) QNHLQADNFyQTV (-) QNHLQADNFY(0.99)QT(0.0)V y:Phosphorylated Y CRIM1 121153.3 4 1 121.1 25.33 HUMAN 1 17.3193 6.3397 HLQPHFDSPAFQDHP-p Q14258;S137-p HLQPHFDSPAFQDHP 0.649743378726889 0.0387909551462209 0.074 0.292666666666667 3.51268057835157 18.9492822088035 0.074 0.292666666666667 0.445381262657841 0.0127371357985635 0.822751243062021 3.65380306391384 Q14258 TRIM25 Q14258.S137.p_TRIM25 Q14258_S137s _1_1_137_137 Q14258 Q14258 E3 ubiquitin/ISG15 ligase TRIM25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26401.26401.5 25.11 25.11 3.608 3 1 1 0 952.054 4676.2621 S137s TMT10 118 (K) TCLVCMASFCQEHLQPHFDsPAFQDHPLQPPVRDLLR (R) T(0.0)CLVCMAS(0.0)FCQEHLQPHFDS(0.99)PAFQDHPLQPPVRDLLR C:Carbamidomethylation,s:Phosphorylated S TRIM25 72626.7 1 3 2037.1 101.35 HUMAN 1 3.5127 18.9493 HLQRQRVSFEQVKRI-p Q9Y6R4;S350-p HLQRQRVSFEQVKRI 0.0707339804846959 0.265821209274655 -0.534666666666667 -0.150666666666667 24.8388694967793 7.57626437808319 -0.534666666666667 -0.150666666666667 0.00328180710055076 0.174732448312172 -5.00308279269768 -1.56108747202437 Q9Y6R4 MAP3K4 Q9Y6R4.S350.p_MAP3K4 Q9Y6R4_S350s _1_1_350_350 Q9Y6R4 Q9Y6R4|F5H538|Q9Y6R4-2|J3KNB8 Mitogen-activated protein kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20706.20706.2 8.49 1.67 99 1 1 1 0 687.8766 1294.7771 S350s TMT10 349 (R) VsFEQVK (R) VS(1.0)FEQVK K:TMT10,s:Phosphorylated S MAP3K4 183393.1 1 2 1091.1 179.07 HUMAN 1 -24.8389 -7.5763 HLRFKLQSLSRRLDE-p Q86V48;S22-p HLRFKLQSLSRRLDE 0.470393690548577 0.00671440116022213 0.198 -0.621333333333333 6.0455890427132 31.2059889468577 0.198 -0.621333333333333 0.248565640657306 0.000757532212966091 1.29268083969569 -6.79626033260643 Q86V48 LUZP1 Q86V48.S22.p_LUZP1 Q86V48_S22s _1_1_22_22 Q86V48 Q86V48|Q86V48-3|Q86V48-2 Leucine zipper protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16382.16382.3 7.73 7.73 7.732 2 1 1 0 506.2942 1436.899 S22s TMT10 18 (R) FKLQsLSR (R) FKLQS(0.99)LS(0.0)R K:TMT10,s:Phosphorylated S LUZP1 120843.3 1 1 507.1 289.34 HUMAN 1 6.0456 -31.206 HLRGLQNSASDLRGQ-p A0A087X165;S694-p HLRGLQNSASDLRGQ 0.80214682418683 0.0771603664190984 0.0456666666666667 0.225333333333333 1.84302134008169 14.7614107253776 0.0456666666666667 0.225333333333333 0.654180909089451 0.0334086500571934 0.47375035289669 2.83201012608909 A0A087X165 NotFound A0A087X165.S694.p_NotFound A0A087X165_S694s _1_1_694_694 A0A087X165 A0A087X165|Q9C0H9-5 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15964.15964.4 10.02 6.9 1.371 2 1 1 0 638.3542 2470.4254 S694s TMT10 690 (R) GLQNsASDLRGQLQQLRK (L) GLQNS(0.99)AS(0.0)DLRGQLQQLRK K:TMT10,s:Phosphorylated S SRCIN1 130745.5 1 23 98.1 603.22 HUMAN 1 1.843 14.7614 HLRHAIPSAERGPGL-p Q92615;S424-p HLRHAIPSAERGPGL 0.906664146026909 0.889469027764128 -0.0186666666666667 0.015 0.835741296321232 0.713144675319231 -0.0186666666666667 0.015 0.824946663491361 0.848565815991712 -0.232152682586609 0.200271464000554 Q92615 LARP4B Q92615.S424.p_LARP4B Q92615_S424s _1_1_424_424 Q92615 Q92615 La-related protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26008.26008.3 10.37 7.89 2.356 4 1 1 0 997.8361 2911.5264 S424s TMT10 420 (R) HAIPsAERGPGLLESPSIFNFTADR (L) HAIPS(0.99)AERGPGLLES(0.0)PS(0.0)IFNFT(0.0)ADR s:Phosphorylated S LARP4B 80949.9 2 1 332.1 357.69 HUMAN 1 -0.8357 0.7131 HLRLRRESPESEGPI-p Q96QK1;S783-p HLRLRRESPESEGPI 0.956607421143909 0.683565292617347 0.00866666666666666 0.043 0.378406479934231 2.26162805219229 0.00866666666666666 0.043 0.916556732852431 0.594069416360566 0.109758288343942 0.565923368285138 Q96QK1 VPS35 Q96QK1.S783.p_VPS35 Q96QK1_S783s _1_1_783_783 Q96QK1 Q96QK1 Vacuolar protein sorting-associated protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25608.25675.3 15.67 15.77 1.131 3 1 1 0 789.7441 2287.2495 S783s TMT10 779 (R) LRREsPESEGPIYEGLIL (-) LRRES(0.99)PES(0.0)EGPIY(0.0)EGLIL s:Phosphorylated S VPS35 92504.1 1 1 5876.1 15.67 HUMAN 1 0.3784 2.2616 HLRPITDSPVLGAQR-p Q9NZL9;S282-p HLRPITDSPVLGAQR 0.51855614452958 0.0444539202864225 0.091 0.239333333333333 5.27028652318176 18.0989267445894 0.091 0.239333333333333 0.297146998431959 0.0154919941936203 1.15336686288357 3.4794455838834 Q9NZL9 MAT2B Q9NZL9.S282.p_MAT2B Q9NZL9_S282s _1_1_282_282 Q9NZL9 Q9NZL9|Q9NZL9-2 Methionine adenosyltransferase 2 subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29479.29479.4 24.35 24.35 1.756 5 1 1 0 991.4977 3882.9945 S282s TMT10 259 (K) YEMACAIADAFNLPSSHLRPITDsPVLGAQRPR (N) Y(0.0)EMACAIADAFNLPS(0.0)S(0.0)HLRPIT(0.0)DS(0.99)PVLGAQRPR C:Carbamidomethylation,s:Phosphorylated S MAT2B 37893.4 6 2 3673.1 45.59 HUMAN 1 5.2703 18.0989 HLRRQFASQANVVGP-p O43707;S656-p HLRRQFASQANVVGP 0.0506176118125653 0.0115547872731964 -0.698666666666667 0.644666666666667 28.5308763676404 27.1094786457273 -0.698666666666667 0.644666666666667 0.00140253065779147 0.00194559362883819 -5.99729720695126 5.59090140092437 O43707 ACTN4 O43707.S656.p_ACTN4 O43707_S656s _1_1_656_656 O43707 O43707|O43707-2|O43707-3|F5GXS2 Alpha-actinin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26709.26709.3 17.6 17.6 10.565 2 1 1 0 771.415 2232.2541 S656s TMT10 653 (R) QFAsQANVVGPWIQTK (M) QFAS(0.99)QANVVGPWIQT(0.0)K K:TMT10,s:Phosphorylated S ACTN4 105308.6 2 7 1097.1 178.17 HUMAN 1 -28.5309 27.1095 HLRTLQISYDALKDE-p Q96C92;S270-p HLRTLQISYDALKDE 0.337331275258612 0.0745507231365491 -0.138 -0.218333333333333 8.79466871075365 14.9684027495954 -0.138 -0.218333333333333 0.131987599086914 0.0318536882285135 -1.77281975147731 -2.87065879409029 Q96C92 SDCCAG3 Q96C92.S270.p_SDCCAG3 Q96C92_S270s _1_1_270_270 Q96C92 Q96C92|Q96C92-2|Q96C92-3|Q96C92-4 Serologically defined colon cancer antigen 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21306.21306.4 19.04 19.04 3.788 4 1 1 0 623.8369 2412.3589 S270s TMT10 266 (R) TLQIsYDALKDENSK (L) T(0.0)LQIS(0.99)Y(0.0)DALKDENS(0.0)K K:TMT10,s:Phosphorylated S SDCCAG3 48302.7 1 3 1849.1 111.15 HUMAN 1 -8.7947 -14.9684 HLSDNDASDVE____-p Q96QE2;S645-p HLSDNDASDVE____ 0.340822094730876 0.222151082181479 0.157666666666667 0.139 8.69123704434184 8.60405774493416 0.157666666666667 0.139 0.135168749370838 0.137909513209086 1.75491543096962 1.73922744864653 Q96QE2 SLC2A13 Q96QE2.S645.p_SLC2A13 Q96QE2_S640sS645s_2_2_640_645 Q96QE2 Q96QE2 Proton myo-inositol cotransporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12184.12184.3 11.44 11.44 11.44 4 2 2 0 671.2573 1851.8194 S640s S645s TMT10 634 (K) GSNYHLsDNDAsDVE (-) GS(0.0)NY(0.0)HLS(0.99)DNDAS(0.99)DVE s:Phosphorylated S SLC2A13 71225.4 3 3 4452.1 31.19 HUMAN 1 8.6912 8.6041 HLSGRKLSLQERSQG-p Q96RR4-3;S100-p HLSGRKLSLQERSQG 0.341280214844005 0.0228525896888757 -0.234 0.59 8.67486140022691 22.4026030672946 -0.234 0.59 0.135679383002485 0.00575095134415212 -1.7520806403131 4.40983290628488 Q96RR4 CAMKK2 Q96RR4.3.S100.p_CAMKK2 Q96RR4-3_S100s _1_1_100_100 Q96RR4-3 Q96RR4|Q96RR4-7|Q96RR4-4|Q96RR4-3|Q96RR4-2|J3KPJ3|Q8N5S9-2|Q96RR4-5 Isoform 3 of Calcium/calmodulin-dependent protein kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10178.10178.3 8.13 8.13 99 1 1 1 0 471.2747 1331.8411 S100s TMT10 98 (R) KLsLQER (S) KLS(1.0)LQER K:TMT10,s:Phosphorylated S CAMKK2 60285.4 1 7 1793.1 114.32 HUMAN 1 -8.6749 22.4026 HLSTFSFTKVDVGQQ-p A0FGR8-4;T34-p HLSTFSFTKVDVGQQ 0.883845724742002 0.0734100397529774 0.028 -0.224666666666667 1.0597268242269 15.0629491897002 0.028 -0.224666666666667 0.783478922860306 0.0311677233992208 0.288793893761432 -2.88837121141399 A0FGR8 ESYT2 A0FGR8.4.T34.p_ESYT2 A0FGR8-4_S32sT34t_2_2_32_34 A0FGR8-4 A0FGR8-4 Isoform 4 of Extended synaptotagmin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9129.9129.5 8.02 8.02 2.354 6 2 2 0 973.2815 4702.4719 S32s T34t Acetyl 1 (-) MWPFICQFIEKLFRETIEPAVRGANTHLSTFsFtK (V) MWPFICQFIEKLFRET(0.0)IEPAVRGANT(0.0)HLS(0.0)T(0.0)FS(0.99)FT(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T ESYT2 59744.5 1 1 1886.2 109.02 HUMAN 1 1.0597 -15.0629 HMDDGGYSMNFNMSS-p P38159;S135-p HMDDGGYSMNFNMSS 0.990532406704112 0.238194924734818 -0.00199999999999999 -0.132333333333333 0.0849027546542689 8.20704253666473 -0.00199999999999999 -0.132333333333333 0.98064027214981 0.151110884042514 -0.025407923624788 -1.67051510578349 P38159 RBMX P38159.S135.p_RBMX P38159_S135s _1_1_135_135 P38159 P38159|Q96E39|P38159-2|H3BT71 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14727.14727.3 23.85 23.85 4.876 5 1 1 0 786.9756 2278.9477 S135s TMT10 126 (R) GGHMDDGGYsMNFNMSSSR (G) GGHMDDGGY(0.0)S(0.99)MNFNMS(0.0)S(0.0)S(0.0)R s:Phosphorylated S RBMX 42331.1 10 8 102.1 595.29 HUMAN 1 -0.0849 -8.207 HMESLSQSKSFRRRH-p Q96F86;S152-p HMESLSQSKSFRRRH 0.655753206660464 0.0352813246538492 -0.0806666666666667 -0.371333333333333 3.43810612404001 19.5518634459216 -0.0806666666666667 -0.371333333333333 0.453095123027505 0.0110869899896465 -0.808074546240063 -3.77999228357241 Q96F86 EDC3 Q96F86.S152.p_EDC3 Q96F86_S152s _1_1_152_152 Q96F86 Q96F86 Enhancer of mRNA-decapping protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7570.7570.3 10.73 10.73 1.195 3 1 1 0 528.9333 1504.8194 S152s TMT10 145 (R) HMESLSQsK (S) HMES(0.0)LS(0.0)QS(0.99)K K:TMT10,s:Phosphorylated S EDC3 56818.2 1 3 2217.1 93.04 HUMAN 1 -3.4381 -19.5519 HMKIRSQSFNTDTTT-p Q6R327-3;S1219-p HMKIRSQSFNTDTTT 0.188576358411049 0.0592390287009575 0.241 0.22 14.2162537166295 16.3527721247001 0.241 0.22 0.0378769175287173 0.0231591591667067 2.73271013687339 3.13394744604151 Q6R327 RICTOR Q6R327.3.S1219.p_RICTOR Q6R327-3_S1219s _1_1_1219_1219 Q6R327-3 Q6R327-3 Isoform 3 of Rapamycin-insensitive companion of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13925.13925.3 18.68 18.68 1.187 13 1 1 0 858.7134 2494.1565 S1219s TMT10 1217 (R) SQsFNTDTTTSGISSMSSSPSR (E) S(0.0)QS(0.99)FNT(0.0)DT(0.0)T(0.0)T(0.0)S(0.0)GIS(0.0)S(0.0)MS(0.0)S(0.0)S(0.0)PS(0.0)R s:Phosphorylated S RICTOR 197118.3 3 10 452.1 308.36 HUMAN 1 14.2163 16.3528 HMSCPHLSPSKSLIN-p Q9NR48;S1544-p HMSCPHLSPSKSLIN 0.330339479632074 0.0123889155351711 0.189666666666667 -0.379333333333333 8.98844850680028 26.6115674635502 0.189666666666667 -0.379908188904436 0.126227839608078 0.00218194225913872 1.80636316820291 -5.45647230523294 Q9NR48 ASH1L Q9NR48.S1544.p_ASH1L Q9NR48_S1544s _1_1_1544_1544 Q9NR48 Q9NR48|Q9NR48-2 Histone-lysine N-methyltransferase ASH1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8433.8433.3 13.33 13.33 3.156 3 1 1 0 660.3069 1898.944 S1544s TMT10 1536 (R) CHMSCPHLsPSK (S) CHMS(0.0)CPHLS(0.99)PS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ASH1L 336378.7 3 13 245.1 412 HUMAN 1 8.9884 -26.6116 HMVDGNVSGEFTDLV-p O95433;S258-p HMVDGNVSGEFTDLV 0.998180995519267 0.849486764945369 -0.000333333333333348 0.0273333333333333 0.0143606986262217 0.995316972414536 -0.000333333333333346 0.0273333333333333 0.996698787964255 0.795185226348004 -0.00433201147839254 0.272676486219084 O95433 AHSA1 O95433.S258.p_AHSA1 O95433_S258s _1_1_258_258 O95433 O95433|O95433-2 Activator of 90 kDa heat shock protein ATPase homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27630.27630.4 15.31 12.92 1.615 2 1 1 0 665.5802 2579.3216 S258s TMT10 250 (K) FHMVDGNVsGEFTDLVPEK (H) FHMVDGNVS(0.99)GEFT(0.0)DLVPEK K:TMT10,s:Phosphorylated S AHSA1 38444.8 3 1 5923.1 15.31 HUMAN 1 -0.0144 0.9953 HNALAKIYIDSNNNP-p A0A087WVQ6;Y887-p HNALAKIYIDSNNNP 0.804709591525205 0.128610683333892 -0.0596666666666667 -0.197666666666667 1.81898704359119 11.7454863867909 -0.0596666666666667 -0.197666666666667 0.65781124856494 0.0669038887042179 -0.468331500952604 -2.28615831714926 A0A087WVQ6 CLTC A0A087WVQ6.Y887.p_CLTC A0A087WVQ6_Y887y _1_1_887_887 A0A087WVQ6 A0A087WVQ6|Q00610|Q00610-2 Clathrin heavy chain GG20160819_MSz_CCLE_T4D7_pY_Injection_01.15401.15401.2 9.1 4.46 1.447 2 1 1 0 822.3868 1563.7965 Y887y TMT10 886 (K) IyIDSNNNPER (F) IY(0.99)IDS(0.0)NNNPER y:Phosphorylated Y CLTC 193823.3 2 1 64.1 36.6 HUMAN 1 -1.819 -11.7455 HNDYKVASPALRAVG-p O60684;S312-p HNDYKVASPALRAVG 0.723749146683645 0.324416164233909 0.0483333333333333 0.0993333333333333 2.65760486060975 6.46656762455749 0.0483333333333333 0.0993333333333334 0.542299886997853 0.22560215174783 0.649966623475202 1.36692680292099 O60684 KPNA6 O60684.S312.p_KPNA6 O60684_S312s _1_1_312_312 O60684 O60684 Importin subunit alpha-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9264.9264.2 7.32 3.27 99 1 1 1 0 511.7832 942.5934 S312s TMT10 310 (K) VAsPALR (A) VAS(1.0)PALR s:Phosphorylated S KPNA6 60770.1 1 3 3759.1 43.77 HUMAN 1 2.6576 6.4666 HNEFDFISGTRMRKL-p O95340-2;S582-p HNEFDFISGTRMRKL 0.822323520856827 0.690757406986246 -0.0336666666666667 0.0403333333333334 1.63502881845218 2.20309047668035 -0.0336666666666667 0.0403333333333334 0.686273324496693 0.602130952046856 -0.426368735489929 0.553255803681429 O95340 PAPSS2 O95340.2.S582.p_PAPSS2 O95340-2_S582s _1_1_582_582 O95340-2 O95340-2 Isoform B of Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16100.16100.3 9.28 9.28 1.192 2 1 1 0 544.5858 1551.7753 S582s TMT10 575 (R) HNEFDFIsGTR (M) HNEFDFIS(0.99)GT(0.0)R s:Phosphorylated S PAPSS2 70539.6 1 3 4549.1 29.99 HUMAN 1 -1.635 2.2031 HNGRVGGSPVRHLYS-p Q96I34;S418-p HNGRVGGSPVRHLYS 0.59052057106021 0.166328660220668 -0.0756666666666667 -0.233333333333333 4.21639529609689 10.2457232852192 -0.0756666666666667 -0.233333333333333 0.378756827659873 0.0944990998099199 -0.958274286695187 -2.02359409547418 Q96I34 PPP1R16A Q96I34.S418.p_PPP1R16A Q96I34_S418s _1_1_418_418 Q96I34 Q96I34 Protein phosphatase 1 regulatory subunit 16A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11579.11579.4 14.43 14.43 6.694 3 1 1 0 460.2578 1758.0427 S418s TMT10 415 (R) VGGsPVRHLYSK (R) VGGS(0.99)PVRHLY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S PPP1R16A 58438 8 3 3132.1 59.87 HUMAN 1 -4.2164 -10.2457 HNGTGGKSIYGEKFE-p P62937;S77-p HNGTGGKSIYGEKFE 0.27384188594431 0.0196841682375303 -0.349333333333333 0.467666666666667 10.6530330092765 23.4146573411337 -0.349333333333333 0.467666666666667 0.0860392664561357 0.00455548127549653 -2.09542891767828 4.64781460578748 P62937 PPIA P62937.S77.p_PPIA P62937_S77s _1_1_77_77 P62937 P62937 Peptidyl-prolyl cis-trans isomerase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27123.27123.3 13.84 13.84 8.052 2 1 1 0 867.1287 2519.4001 S77s TMT10 77 (K) sIYGEKFEDENFILK (H) S(0.99)IY(0.0)GEKFEDENFILK K:TMT10,s:Phosphorylated S PPIA 18240.4 1 3 2402.1 85.13 HUMAN 1 -10.653 23.4147 HNIKRGESGNIKAGL-p Q96IZ7;S167-p HNIKRGESGNIKAGL 0.34689437832203 0.0239281319583478 0.153333333333333 0.338666666666667 8.54306422021858 22.0999595467311 0.153333333333333 0.338666666666667 0.139860017413943 0.00616600745291481 1.7292631645263 4.34020845964019 Q96IZ7 RSRC1 Q96IZ7.S167.p_RSRC1 Q96IZ7_S167s _1_1_167_167 Q96IZ7 Q96IZ7|C9J713 Serine/Arginine-related protein 53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4528.4528.3 7.24 7.24 99 1 1 1 0 466.9216 1318.7843 S167s TMT10 164 (K) RGEsGNIK (A) RGES(1.0)GNIK K:TMT10,s:Phosphorylated S RSRC1 38676.4 1 5 2282.1 89.79 HUMAN 1 8.5431 22.1 HNRDLRNSQRNHTVS-p Q5VWN6;S2082-p HNRDLRNSQRNHTVS 0.67010206648574 0.482706710374473 -0.172 -0.085 3.25644161413386 4.22212232212424 -0.172 -0.085 0.472449983966225 0.378257691542913 -0.772034113354585 -0.959188264231249 Q5VWN6 FAM208B Q5VWN6.S2082.p_FAM208B Q5VWN6_S2082s _1_1_2082_2082 Q5VWN6 Q5VWN6|Q5VWN6-2 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3637.3637.3 9.56 4.41 99 1 1 1 0 399.8701 1117.6275 S2082s TMT10 2078 (R) DLRNsQR (N) DLRNS(1.0)QR s:Phosphorylated S FAM208B 271861.7 1 18 275.1 391.61 HUMAN 1 -3.2564 -4.2221 HNRIPYQSPVSSSES-p Q5T6F2;S630-p HNRIPYQSPVSSSES 0.598753840658952 0.542789690336819 0.1085 0.06 4.1164366866964 3.57005908215059 0.1085 0.06 0.387575513702174 0.439535635880553 0.95799145251667 0.833868455445456 Q5T6F2 UBAP2 Q5T6F2.S630.p_UBAP2 Q5T6F2_S630s _1_1_630_630 Q5T6F2 Q5T6F2 Ubiquitin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16622.16622.3 19.84 19.84 1.12 7 1 1 0 932.4404 2715.3358 S630s TMT10 626 (R) IPYQsPVSSSESAPGTIMNGHGGGR (S) IPY(0.0)QS(0.99)PVS(0.0)S(0.0)S(0.0)ES(0.0)APGT(0.0)IMNGHGGGR s:Phosphorylated S UBAP2 117683.9 1 6 2109.1 97.32 HUMAN 1 4.1164 3.5701 HNRTLDRSGDLGDME-p C9JZR2;S920-p HNRTLDRSGDLGDME 0.0658837618616825 0.0249522643694336 1.46133333333333 -0.857333333333333 25.4832952734616 21.807152448698 1.46133333333333 -0.857333333333334 0.00282924445018933 0.00659606239438356 5.16723126546768 -4.27350067151213 C9JZR2 NotFound C9JZR2.S920.p_NotFound C9JZR2_S920s _1_1_920_920 C9JZR2 C9JZR2 Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27214.27214.4 12.15 12.15 1.165 4 1 1 0 814.6891 3175.7674 S920s TMT10 916 (R) TLDRsGDLGDMEPLKGTTPLMKI (-) T(0.0)LDRS(0.99)GDLGDMEPLKGT(0.0)T(0.0)PLMKI K:TMT10,s:Phosphorylated S CTNND1 105417.2 1 1 21.4 1014.17 HUMAN 1 25.4833 -21.8072 HNSKHNKSPTLSCRF-p Q5T5U3;S1513-p HNSKHNKSPTLSCRF 0.435591503774963 0.234918988816684 0.121666666666667 0.135333333333333 6.64597082780552 8.28431379531039 0.121666666666667 0.135333333333333 0.216472591943425 0.148446041291462 1.39888855843976 1.68389505788006 Q5T5U3 ARHGAP21 Q5T5U3.S1513.p_ARHGAP21 Q5T5U3_S1513s _1_1_1513_1513 Q5T5U3 Q5T5U3|A0A087WW76 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.4337.4337.4 10.77 10.77 1.297 3 1 1 0 435.227 1657.9208 S1513s TMT10 1510 (K) HNKsPTLSCR (F) HNKS(0.99)PT(0.0)LS(0.0)CR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ARHGAP21 218696.3 3 21 148.1 512.52 HUMAN 1 6.646 8.2843 HNTSDKQTPSKPKKK-p Q9NZJ0;T196-p HNTSDKQTPSKPKKK 0.158297715435374 0.00265134466421331 0.309 -0.993333333333333 16.0474381524349 39.1903140498106 0.309 -0.993333333333333 0.024845983058428 0.000120494880419074 3.07730420848985 -9.77307148287548 Q9NZJ0 DTL Q9NZJ0.T196.p_DTL Q9NZJ0_T196t_1_1_196_196 Q9NZJ0 Q9NZJ0|F5GZ90 Denticleless protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6768.6768.2 7.64 3.18 3.177 2 1 1 0 653.8623 1243.7774 Q195q T196t Hydrogen 195 (K) qtPSKPK (K) Q(1.0)T(0.99)PS(0.0)KPK K:TMT10-Lys-Only,q:Pyroglutamic acid,t:Phosphorylated T DTL 80892.7 3 1 461.1 305.23 HUMAN 1 16.0474 -39.1903 HNVFKRHSMREEDFI-p Q14289;S778-p HNVFKRHSMREEDFI 0.523598348587299 0.654976908619292 0.102333333333333 0.0636666666666667 5.198330944827 2.51201108712194 0.102333333333333 0.0636666666666667 0.302111255364686 0.560788231734067 1.14028220109931 0.619346332106567 Q14289 PTK2B Q14289.S778.p_PTK2B Q14289_S778s _1_1_778_778 Q14289 Q14289 Protein-tyrosine kinase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16124.16124.5 18.92 18.42 4.255 3 1 1 0 751.7665 3674.8386 S778s TMT10 776 (K) RHsMREEDFIQPSSREEAQQLWEAEK (V) RHS(0.99)MREEDFIQPS(0.0)S(0.0)REEAQQLWEAEK K:TMT10,s:Phosphorylated S PTK2B 117184.8 1 15 979.2 192.68 HUMAN 1 5.1983 2.512 HPAPRSRSPLLVTVV-p Q5VWN6;S2037-p HPAPRSRSPLLVTVV 0.358160899463675 0.141011192119436 0.140666666666667 0.161666666666667 8.28533402757452 11.2089240295177 0.140666666666667 0.161666666666667 0.148411172864743 0.0757020424628878 1.68462568012453 2.1917423690403 Q5VWN6 FAM208B Q5VWN6.S2037.p_FAM208B Q5VWN6_S2037s _1_1_2037_2037 Q5VWN6 Q5VWN6 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18591.18591.3 15.44 6.74 5.329 3 1 1 0 719.0364 2075.1244 S2037s Hydrogen 2037 (R) sPLLVTVVESDPRPQGQPR (R) S(0.99)PLLVT(0.0)VVES(0.0)DPRPQGQPR s:Phosphorylated S FAM208B 271861.7 8 16 275.1 391.61 HUMAN 1 8.2853 11.2089 HPARVAFSVARAGQK-p P39023;S265-p HPARVAFSVARAGQK 0.907131913243435 0.486589563508319 -0.0203333333333334 0.0693333333333333 0.830523033349133 4.17967595908111 -0.0203333333333333 0.0716327556177468 0.825938473438731 0.381972769979463 -0.23080941968926 0.951156287928588 P39023 RPL3 P39023.S265.p_RPL3 P39023_S265s _1_1_265_265 P39023 P39023|G5E9G0 60S ribosomal protein L3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15043.15043.2 9.1 3.85 99 1 1 1 0 529.7842 978.5934 S265s TMT10 262 (R) VAFsVAR (A) VAFS(1.0)VAR s:Phosphorylated S RPL3 46393.3 2 2 5292.1 20.93 HUMAN 1 -0.8305 4.1797 HPASPGGSEDGPPGS-p Q99856;S81-p HPASPGGSEDGPPGS 0.390105099545893 0.314204042039509 -0.123666666666667 0.170333333333333 7.55981106234562 6.6451605149061 -0.123666666666667 0.170333333333333 0.175395680520046 0.216512985479637 -1.55869226045242 1.39837908048741 Q99856 ARID3A Q99856.S81.p_ARID3A Q99856_S77sS81s_2_2_77_81 Q99856 Q99856 AT-rich interactive domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11830.11830.4 19.95 19.95 6.745 3 2 2 0 763.0751 2889.3448 S77s S81s TMT10 67 (R) AAAAGLGHPAsPGGsEDGPPGSEEEDAAR (E) AAAAGLGHPAS(0.99)PGGS(0.99)EDGPPGS(0.0)EEEDAAR s:Phosphorylated S ARID3A 62944.9 3 6 2804.1 70.06 HUMAN 1 -7.5598 6.6452 HPCRSHGSPTHVRRG-p Q5VT52-5;S914-p HPCRSHGSPTHVRRG 0.177143878244816 0.0137936499341328 0.378666666666667 0.528333333333333 14.9015489885644 25.8317996019235 0.378666666666667 0.528333333333333 0.0323478262072682 0.00261107916777839 2.86000691723083 5.25073852471358 Q5VT52 RPRD2 Q5VT52.5.S914.p_RPRD2 Q5VT52-5_S914s _1_1_914_914 Q5VT52-5 Q5VT52-5 Isoform 5 of Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3004.3004.3 12.99 12.99 2.79 3 1 1 0 429.545 1206.6541 S914s TMT10 911 (R) SHGsPTHVR (R) S(0.0)HGS(0.99)PT(0.0)HVR s:Phosphorylated S RPRD2 100726.5 2 35 172.2 488.65 HUMAN 1 14.9015 25.8318 HPEGNGRSGFLIHGE-p Q7Z698;S55-p HPEGNGRSGFLIHGE 0.0715981735064038 0.00780633529187751 -0.625 0.593666666666667 24.7584573042074 30.0756311758945 -0.625 0.593666666666667 0.00334313773485326 0.000982736038034437 -4.98286041896171 6.44491803331421 Q7Z698 SPRED2 Q7Z698.S55.p_SPRED2 Q7Z698_S55s _1_1_55_55 Q7Z698 Q7Z698|Q7Z698-2 Sprouty-related, EVH1 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21192.21192.3 8.5 1.66 99 1 1 1 0 761.4252 2202.2962 S55s TMT10 55 (R) sGFLIHGERQKDK (L) S(1.0)GFLIHGERQKDK K:TMT10,s:Phosphorylated S SPRED2 48755.5 1 1 3656.1 45.99 HUMAN 1 -24.7585 30.0756 HPEPKRPSVDSLVSK-p C9K0J5;S1048-p HPEPKRPSVDSLVSK 0.125493780056809 0.0480248023052339 -0.326666666666667 -0.238333333333333 18.7511689943542 17.6341074430916 -0.326666666666667 -0.238333333333333 0.0133316253530723 0.0172420641148859 -3.61591520194272 -3.38588935513776 C9K0J5 RAPH1 C9K0J5.S1048.p_RAPH1 C9K0J5_S1048s _1_1_1048_1048 C9K0J5 C9K0J5|Q70E73 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14228.14228.3 7.72 7.72 1.185 3 1 1 0 542.6398 1545.9365 S1048s TMT10 1046 (K) RPsVDSLVSK (F) RPS(0.99)VDS(0.0)LVS(0.0)K K:TMT10,s:Phosphorylated S RAPH1 141861.7 1 9 619.1 260.34 HUMAN 1 -18.7512 -17.6341 HPEQKLATPELLETA-p Q8N6R0;T662-p HPEQKLATPELLETA 0.334636894133179 0.537570777476765 0.198 -0.0676666666666666 8.87453046354759 3.62595527106558 0.198 -0.0676666666666666 0.12958267879508 0.433914809553025 1.78664366209788 -0.844785902021082 Q8N6R0 METTL13 Q8N6R0.T662.p_METTL13 Q8N6R0_T662t _1_1_662_662 Q8N6R0 Q8N6R0|Q8N6R0-3|Q8N6R0-1|Q8N6R0-2 Methyltransferase-like protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30547.30547.3 17.43 17.43 8.267 2 1 1 0 655.3522 1884.064 T662t TMT10 660 (K) LAtPELLETAQALER (T) LAT(0.99)PELLET(0.0)AQALER t:Phosphorylated T METTL13 79622.3 1 3 3629.1 46.6 HUMAN 1 8.8745 -3.626 HPGKGVKSPGEKSRY-p Q01094;S121-p HPGKGVKSPGEKSRY 0.0350618685416583 0.000952253650599092 0.684 -1.37133333333333 33.8812916997809 54.9087057178868 0.684 -1.37133333333333 0.000409138953533244 3.22945641920427e-06 7.70563226428197 -19.3918362391824 Q01094 E2F1 Q01094.S121.p_E2F1 Q01094_S121s _1_1_121_121 Q01094 Q01094 Transcription factor E2F1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6878.6878.2 8.41 3.98 99 1 1 1 0 784.9547 1488.9353 S121s TMT10 118 (K) GVKsPGEK (S) GVKS(1.0)PGEK K:TMT10,s:Phosphorylated S E2F1 47261.3 1 1 3487.1 49.84 HUMAN 1 33.8813 -54.9087 HPGQPEDSPEAEAST-p Q86VP3-2;S390-p HPGQPEDSPEAEAST 0.332467641278883 0.443226588872475 0.143333333333333 0.163 8.92992711970579 4.70615850150718 0.143333333333333 0.163 0.127940277402926 0.338363999595351 1.79623281624798 1.04972241375511 Q86VP3 PACS2 Q86VP3.2.S390.p_PACS2 Q86VP3-2_S390s _1_1_390_390 Q86VP3-2 Q86VP3-2|Q86VP3-3|F8VW41 Isoform 2 of Phosphofurin acidic cluster sorting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20477.20477.3 26.31 23.64 6.478 4 1 1 0 950.7623 2770.3005 S390s TMT10 382 (R) EHPGQPEDsPEAEASTLDVFTER (L) EHPGQPEDS(0.99)PEAEAS(0.0)T(0.0)LDVFT(0.0)ER s:Phosphorylated S PACS2 100425.5 1 3 1483.1 138.31 HUMAN 1 8.9299 4.7062 HPHAGGGSQENLDND-p Q92997;S125-p HPHAGGGSQENLDND 0.175126391202982 0.128895052576589 0.254666666666667 0.219 15.0657586607154 11.7303389494362 0.254666666666667 0.219 0.0311475673755522 0.0671376452639973 2.89079338758352 2.2834842071588 Q92997 DVL3 Q92997.S125.p_DVL3 Q92997_S125s _1_1_125_125 Q92997 Q92997|Q92997-2 Segment polarity protein dishevelled homolog DVL-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13264.13264.5 24.33 24.33 6.066 8 1 1 0 843.9902 4135.9503 S125s TMT10 106 (R) TGGIGDSRPPSFHPHAGGGsQENLDNDTETDSLVSAQR (E) T(0.0)GGIGDS(0.0)RPPS(0.0)FHPHAGGGS(0.99)QENLDNDT(0.0)ET(0.0)DS(0.0)LVS(0.0)AQR s:Phosphorylated S DVL3 78395.8 4 2 2133.1 96.37 HUMAN 1 15.0658 11.7303 HPHGVKRSASPDDDL-p O00193;S15-p HPHGVKRSASPDDDL 0.555883641449326 0.0140435142649084 0.110666666666667 0.394333333333333 4.70799241952482 25.6947961542519 0.110666666666667 0.394333333333333 0.338221147023637 0.00269476181400503 1.05026382907892 5.21518088435967 O00193 C11orf58 O00193.S15.p_C11orf58 O00193_S15sS17s_2_2_15_17 O00193 O00193|E9PM92|E9PQA1 Small acidic protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19269.19269.3 21.15 21.15 8.046 4 2 2 0 984.7442 2792.2808 S15s S17s Hydrogen 15 (R) sAsPDDDLGSSNWEAADLGNEERK (Q) S(0.99)AS(0.99)PDDDLGS(0.0)S(0.0)NWEAADLGNEERK K:TMT10-Lys-Only,s:Phosphorylated S SMAP 20389.2 8 5 825.1 217.63 HUMAN 1 4.708 25.6948 HPHTLDLSPSEKSNI-p Q9BUA3;S121-p HPHTLDLSPSEKSNI 0.574498176987848 0.845376311681427 -0.0736666666666667 -0.031 4.42957047620578 1.02546664550893 -0.0736666666666667 -0.031 0.360614306556953 0.789683994007296 -0.998402171541937 -0.28022662770515 Q9BUA3 C11orf84 Q9BUA3.S121.p_C11orf84 Q9BUA3_S121s _1_1_121_121 Q9BUA3 Q9BUA3 SPIN1-docking protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12822.12822.5 13.19 13.19 1.584 4 1 1 0 522.0738 2526.3717 S121s TMT10 108 (R) SHILEQHPHTLDLsPSEK (S) S(0.0)HILEQHPHT(0.0)LDLS(0.99)PS(0.0)EK K:TMT10,s:Phosphorylated S C11orf84 41321.3 1 5 884.1 206.69 HUMAN 1 -4.4296 -1.0255 HPKGEEGSDDDETEN-p Q6PD62;S970-p HPKGEEGSDDDETEN 0.957246455101486 0.701604903578932 -0.00866666666666668 -0.053 0.370336470995479 2.11514788599305 -0.00866666666666669 -0.053 0.91826145113717 0.614448108157436 -0.107505605339571 -0.534090665596185 Q6PD62 CTR9 Q6PD62.S970.p_CTR9 Q6PD62_S970s _1_1_970_970 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7057.7057.4 18.74 18.74 6.221 2 1 1 0 732.8723 2848.4982 S970s TMT10 966 (K) GEEGsDDDETENGPKPKK (R) GEEGS(0.99)DDDET(0.0)ENGPKPKK K:TMT10,s:Phosphorylated S CTR9 134412.8 37 3 152.1 508.81 HUMAN 1 -0.3703 -2.1151 HPKSVPVSSKKKEAS-p Q03188;S89-p HPKSVPVSSKKKEAS 0.121424171475698 0.000952253650599092 -0.368333333333333 -2.022 19.0444434379941 62.6943455194633 -0.368333333333333 -2.022 0.0124610791967857 5.37731462993519e-07 -3.67681220992995 -27.0716898873621 Q03188 CENPC Q03188.S89.p_CENPC Q03188_S89s _1_1_89_89 Q03188 Q03188|Q03188-2 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9487.9487.2 9.64 5.64 1.165 3 1 1 0 621.3488 1161.7243 S89s TMT10 85 (K) SVPVsSK (K) S(0.0)VPVS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S CENPC 107459.5 1 4 209.1 442.77 HUMAN 1 -19.0444 -62.6943 HPKVKRNSLTASLDK-p A0A0U1RR07;S1208-p HPKVKRNSLTASLDK 0.147909691574128 0.15295985410381 -0.371 0.186 16.8484194261286 10.7230659575521 -0.371 0.186 0.0206613196826875 0.0846629514162335 -3.2328390187269 2.10673820681915 A0A0U1RR07 NotFound A0A0U1RR07.S1208.p_NotFound A0A0U1RR07_S1208s _1_1_1208_1208 A0A0U1RR07 A0A0U1RR07 Synaptotagmin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12502.12502.2 7.78 3.09 2.23 3 1 1 0 821.9493 1562.9266 S1208s TMT10 1206 (K) RNsLTASLDK (L) RNS(0.99)LT(0.0)AS(0.0)LDK K:TMT10,s:Phosphorylated S SYTL2 248167.3 1 6 1920.1 107.01 HUMAN 1 -16.8484 10.7231 HPLCPGASPARQARQ-p Q8N961;S365-p HPLCPGASPARQARQ 0.788195837750741 0.140110310193914 -0.0693333333333334 -0.403 1.99183923532384 11.2478830188801 -0.0693333333333334 -0.403 0.632144081924425 0.0750259836557945 -0.506994021255583 -2.19857747641245 Q8N961 ABTB2 Q8N961.S365.p_ABTB2 Q8N961_S365s _1_1_365_365 Q8N961 Q8N961|Q8N961-2 Ankyrin repeat and BTB/POZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5297.5297.3 12.93 12.93 99 1 1 1 0 491.2403 1391.7415 S365s TMT10 358 (R) HPLCPGAsPAR (Q) HPLCPGAS(1.0)PAR C:Carbamidomethylation,s:Phosphorylated S ABTB2 114795.2 2 3 3088.1 61.05 HUMAN 1 -1.9918 -11.2479 HPLRGSQSFDDKIGT-p P15822;S866-p HPLRGSQSFDDKIGT 0.272312733945943 0.307310262341989 -0.486666666666667 0.288 10.701398606105 6.77151165946284 -0.486666666666667 0.288 0.0850863981025336 0.210304629986752 -2.10387538245116 1.42057551557893 P15822 HIVEP1 P15822.S866.p_HIVEP1 P15822_S866s _1_1_866_866 P15822 P15822 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8952.8952.2 10.2 6.4 2.531 2 1 1 0 711.3392 1341.7051 S866s TMT10 863 (R) GSQsFDDK (I) GS(0.0)QS(0.99)FDDK K:TMT10,s:Phosphorylated S HIVEP1 299483.8 1 17 82.1 631.69 HUMAN 1 -10.7014 6.7715 HPLRQGASPRGPKPQ-p Q86TV6-2;S67-p HPLRQGASPRGPKPQ 0.443392613792182 0.146221607943631 0.177333333333333 0.439 6.5107254611779 10.9991400063938 0.177333333333333 0.439 0.223319915002521 0.079448554384787 1.37506605408437 2.15498722081031 Q86TV6 TTC7B Q86TV6.2.S67.p_TTC7B Q86TV6-2_S67s _1_1_67_67 Q86TV6-2 Q86TV6-2 Isoform 2 of Tetratricopeptide repeat protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3220.3220.3 11.84 6.7 99 1 1 1 0 519.6017 1476.8233 S67s TMT10 59 (K) EHPLRQGAsPR (G) EHPLRQGAS(1.0)PR s:Phosphorylated S TTC7B 96901.3 1 1 2074.1 99.01 HUMAN 1 6.5107 10.9991 HPMDGNDSDYDPKKE-p Q9P2K3-3;S229-p HPMDGNDSDYDPKKE 0.407309744705596 0.0718097258902656 -0.173333333333333 0.248666666666667 7.2029203805513 15.2031706210057 -0.173333333333333 0.248666666666667 0.190417983595513 0.030177477716089 -1.49648869486409 2.91470990863092 Q9P2K3 RCOR3 Q9P2K3.3.S229.p_RCOR3 Q9P2K3-3_S214sS229s_2_2_214_229 Q9P2K3-3 Q9P2K3-3|Q9P2K3-4|Q9P2K3-2|B4DV59 Isoform 3 of REST corepressor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10543.10543.5 14.33 14.33 2.097 4 2 2 0 873.1849 4201.9572 S214s S229s TMT10 205 (K) LANRHNQGDsDDDVEETHPMDGNDsDYDPKK (E) LANRHNQGDS(0.99)DDDVEET(0.0)HPMDGNDS(0.99)DY(0.0)DPKK K:TMT10,s:Phosphorylated S RCOR3 61384.5 9 7 1817.1 112.96 HUMAN 1 -7.2029 15.2032 HPPAPARSPRLRRGQ-p O60307;S1215-p HPPAPARSPRLRRGQ 0.472284687968973 0.75846726294219 0.294333333333333 0.04 6.00871539291592 1.65762416325042 0.294333333333333 0.04 0.250685064902306 0.68271207416774 1.28611602304387 0.431523646706876 O60307 MAST3 O60307.S1215.p_MAST3 O60307_S1215s _1_1_1215_1215 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7461.7461.4 11.91 11.91 5.147 3 1 1 0 508.2695 1950.0871 S1215s TMT10 1201 (R) SPSPLPGHPPAPARsPR (L) S(0.0)PS(0.0)PLPGHPPAPARS(0.99)PR s:Phosphorylated S MAST3 143933.5 1 31 121.3 549.41 HUMAN 1 6.0087 1.6576 HPPKRLRSDPDACPT-p P57678;S205-p HPPKRLRSDPDACPT 0.171396449036957 0.857935366908788 0.266333333333333 -0.0416666666666666 15.2484582242145 0.936918445984135 0.266333333333333 -0.0416666666666667 0.0298644263877368 0.805950103509596 2.92518092124631 -0.25795416763291 P57678 GEMIN4 P57678.S205.p_GEMIN4 P57678_S205s _1_1_205_205 P57678 P57678|I3L2C7 Gem-associated protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36472.36472.3 23.55 21.43 7.818 2 1 1 0 750.6989 2170.1181 S205s Hydrogen 203 (R) LRsDPDACPTMPLLAMLLR (G) LRS(0.99)DPDACPT(0.0)MPLLAMLLR C:Carbamidomethylation,s:Phosphorylated S GEMIN4 121803.8 2 1 5047.1 23.55 HUMAN 1 15.2485 -0.9369 HPPNPPVSPGKTVND-p Q6VMQ6-4;S681-p HPPNPPVSPGKTVND 0.932495418439431 0.694507806294639 0.0136666666666667 0.0433333333333334 0.600411443552184 2.17439425580552 0.0136666666666666 0.0433333333333333 0.870881080185894 0.606122735270085 0.170406069267057 0.547020059828347 Q6VMQ6 ATF7IP Q6VMQ6.4.S681.p_ATF7IP Q6VMQ6-4_S681s _1_1_681_681 Q6VMQ6-4 Q6VMQ6-4|Q6VMQ6-5|Q6VMQ6-2 Isoform 3 of Activating transcription factor 7-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8741.8741.5 20.8 20.8 1.25 5 1 1 0 739.963 3615.8239 S681s TMT10 671 (K) RHEHPPNPPVsPGKTVNDVNSNNNMSYR (N) RHEHPPNPPVS(0.99)PGKT(0.0)VNDVNS(0.0)NNNMS(0.0)Y(0.0)R K:TMT10,s:Phosphorylated S ATF7IP 138346.3 11 12 273.1 392.91 HUMAN 1 0.6004 2.1744 HPPQIPATPPSYESV-p P53990-4;T278-p HPPQIPATPPSYESV 0.282502869387563 0.971521305847351 -0.154666666666667 0.00366666666666667 10.3773368659638 0.177477756158101 -0.154666666666667 0.00366666666666667 0.0916782497319286 0.959957982634885 -2.04734985808993 0.0525687615961236 P53990 IST1 P53990.4.T278.p_IST1 P53990-4_T278t _1_1_278_278 P53990-4 P53990-5|P53990-4|P53990-6 Isoform 4 of IST1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32254.32254.4 28.97 22.96 3.125 7 1 1 0 1234.8361 4856.3918 T278t TMT10 252 (K) GPSDFNGLPMGTYQAFPNIHPPQIPAtPPSYESVDDINADK (N) GPS(0.0)DFNGLPMGT(0.0)Y(0.0)QAFPNIHPPQIPAT(0.99)PPS(0.0)Y(0.0)ES(0.0)VDDINADK K:TMT10,t:Phosphorylated T IST1 40149.3 16 5 1516.1 134.53 HUMAN 1 -10.3773 0.1775 HPPSLCISDSEEEEE-p O43159;S62-p HPPSLCISDSEEEEE 0.960230191181073 0.0230438100338413 0.008 0.306666666666667 0.340512039437543 22.3542221841402 0.00799999999999999 0.306666666666667 0.924589157120923 0.00581537575617853 0.0991494509508172 4.39865603218085 O43159 RRP8 O43159.S62.p_RRP8 O43159_S62sS64s_2_2_62_64 O43159 O43159|E9PPY3 Ribosomal RNA-processing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18675.18675.5 19.53 12.09 17.133 5 2 2 0 804.1899 3856.9842 S62s S64s TMT10 46 (R) ALEAASLSQHPPSLCIsDsEEEEEERKK (K) ALEAAS(0.0)LS(0.0)QHPPS(0.0)LCIS(0.99)DS(0.99)EEEEEERKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RRP8 51455.6 9 7 986.1 191.95 HUMAN 1 0.3405 22.3542 HPQGPRGSPTGGAQL-p Q14684;S513-p HPQGPRGSPTGGAQL 0.343052260059734 0.00288859795277366 0.204666666666667 -0.767333333333333 8.63248884883962 38.3870129049584 0.204666666666667 -0.767333333333334 0.137009636819796 0.000144976866746225 1.74474529910099 -9.42900673325669 Q14684 RRP1B Q14684.S513.p_RRP1B Q14684_S513s _1_1_513_513 Q14684 Q14684|Q14684-2 Ribosomal RNA processing protein 1 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12795.12795.2 12.78 10.66 3.612 2 1 1 0 669.3559 1257.7364 S513s Hydrogen 512 (R) GsPTGGAQLLK (R) GS(0.99)PT(0.0)GGAQLLK K:TMT10-Lys-Only,s:Phosphorylated S RRP1B 84825.4 5 5 473.1 301.95 HUMAN 1 8.6325 -38.387 HPQSRTGTPERAQPP-p X6RAB3;T447-p HPQSRTGTPERAQPP 0.535658500953587 0.287179279789949 0.204666666666667 -0.366333333333333 5.01834254565875 7.14813625662301 0.204666666666667 -0.366333333333333 0.314894985936972 0.192835227408998 1.10741842298911 -1.48650014675506 X6RAB3 NotFound X6RAB3.T447.p_NotFound X6RAB3_T447t _1_1_447_447 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4104.4104.3 13.2 9.23 2.135 2 1 1 0 506.926 1438.7964 T447t TMT10 445 (R) TGtPERAQPPR (R) T(0.0)GT(0.99)PERAQPPR t:Phosphorylated T USP6NL 96835.5 1 4 364.1 342.41 HUMAN 1 5.0183 -7.1481 HPRALAPSPPAEFIY-p Q9UIS9-10;S262-p HPRALAPSPPAEFIY 0.310241942410331 0.0631266856819115 0.144333333333333 0.230333333333333 9.50176533426822 15.9730249445152 0.144333333333333 0.230333333333333 0.112156246529089 0.0252753690517987 1.89526421620614 3.06085423337944 Q9UIS9 MBD1 Q9UIS9.10.S262.p_MBD1 Q9UIS9-10_S262s _1_1_262_262 Q9UIS9-10 Q9UIS9-10 Isoform 10 of Methyl-CpG-binding domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32276.32276.3 19.6 19.6 2.185 5 1 1 0 1080.4993 3159.5182 S262s TMT10 258 (R) ALAPsPPAEFIYYCVDEDELPYTNR (R) ALAPS(0.99)PPAEFIY(0.0)Y(0.0)CVDEDELPY(0.0)T(0.0)NR C:Carbamidomethylation,s:Phosphorylated S MBD1 64577.3 3 1 1033.2 185.84 HUMAN 1 9.5018 15.973 HPRPVPDSPVSVTRL-p Q9BXS9-3;S751-p HPRPVPDSPVSVTRL 0.879481914454382 0.190540328578581 -0.0223333333333333 0.168 1.0976443690116 9.46842502472496 -0.0223333333333333 0.168 0.776668270439169 0.113020571111179 -0.298195280395585 1.88876779411336 Q9BXS9 SLC26A6 Q9BXS9.3.S751.p_SLC26A6 Q9BXS9-3_S751s _1_1_751_751 Q9BXS9-3 Q9BXS9|Q9BXS9-3|Q9BXS9-2|A0A0C4DFT5|Q9BXS9-4|Q9BXS9-7|Q9BXS9-5|G3XAC1 Isoform 3 of Solute carrier family 26 member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25317.25317.5 29.51 29.51 4.073 5 1 1 0 698.7667 3409.8331 S751s TMT10 729 (K) HLFASVHDAVTFALQHPRPVPDsPVSVTR (L) HLFAS(0.0)VHDAVT(0.0)FALQHPRPVPDS(0.99)PVS(0.0)VT(0.0)R s:Phosphorylated S SLC26A6 83293.5 7 2 1806.1 113.67 HUMAN 1 -1.0976 9.4684 HPRRPPRSPGMEPPF-p Q99973;S397-p HPRRPPRSPGMEPPF 0.394490226845296 0.0196437883348825 0.241333333333333 -0.350666666666667 7.45418878178026 23.4282638824999 0.241333333333333 -0.350666666666667 0.179713673581154 0.00454123118732667 1.5403054079785 -4.6510696477997 Q99973 TEP1 Q99973.S397.p_TEP1 Q99973_S397s _1_1_397_397 Q99973 Q99973|Q99973-2|G3V470 Telomerase protein component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7542.7542.5 18.76 18.76 18.762 2 1 1 0 412.208 1977.0439 S397s TMT10 393 (R) RPPRsPGMEPPFSHR (C) RPPRS(0.99)PGMEPPFS(0.0)HR s:Phosphorylated S TEP1 293679.7 5 1 4985.1 24.19 HUMAN 1 7.4542 -23.4283 HPRSRLRSPPEALVQ-p Q9UHB6-4;S132-p HPRSRLRSPPEALVQ 0.251916309792241 0.41475028681321 -0.171666666666667 -0.078 11.4181896114696 5.08449263473155 -0.171666666666667 -0.078 0.0721408140808175 0.310134968307451 -2.22954175339697 -1.11929004136252 Q9UHB6 LIMA1 Q9UHB6.4.S132.p_LIMA1 Q9UHB6-4_S132s _1_1_132_132 Q9UHB6-4 Q9UHB6-4|F8VRN8 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17057.17262.5 18.31 10.03 18.308 2 1 1 0 677.9777 3305.8937 S132s TMT10 130 (R) LRsPPEALVQGRYPHIKDGEDLK (D) LRS(0.99)PPEALVQGRY(0.0)PHIKDGEDLK K:TMT10,s:Phosphorylated S LIMA1 85678.4 16 8 42.1 822.82 HUMAN 1 -11.4182 -5.0845 HPRSRRYSGDSDSSA-p Q99501;S352-p HPRSRRYSGDSDSSA 0.283356232329426 0.274086999333031 0.214333333333333 0.12 10.3425188693162 7.40522448287172 0.214333333333333 0.12 0.0924162012732208 0.18175131080663 2.04128561890065 1.53132769978895 Q99501 GAS2L1 Q99501.S352.p_GAS2L1 Q99501_S352s _1_1_352_352 Q99501 Q99501|A0A5E8 GAS2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5534.5534.3 17.06 17.06 1.173 9 1 1 0 722.6411 2085.9432 S352s Hydrogen 350 (R) RYsGDSDSSASSAQSGPLGTR (S) RY(0.0)S(0.99)GDS(0.0)DS(0.0)S(0.0)AS(0.0)S(0.0)AQS(0.0)GPLGT(0.0)R s:Phosphorylated S GAS2L1 73400.1 4 5 1084.1 179.86 HUMAN 1 10.3425 7.4052 HPTGNSITKSPPLMA-p Q5VZ89-7;T739-p HPTGNSITKSPPLMA 0.815451491549817 0.220839818605831 0.058 0.25 1.70057343568527 8.63676126163869 0.058 0.25 0.675993712339704 0.136874918577412 0.441421186519846 1.74488476476036 Q5VZ89 DENND4C Q5VZ89.7.T739.p_DENND4C Q5VZ89-7_T739t _1_1_739_739 Q5VZ89-7 Q5VZ89-7|Q5VZ89-3|Q5VZ89-5 Isoform 2 of DENN domain-containing protein 4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13104.13104.4 12.91 12.91 1.252 4 1 1 0 612.3441 2366.3833 T739t TMT10 732 (R) HPTGNSItKSPPLMAK (R) HPT(0.0)GNS(0.0)IT(0.99)KS(0.0)PPLMAK K:TMT10,t:Phosphorylated T DENND4C 220154.2 2 2 116.1 565.52 HUMAN 1 1.7006 8.6368 HPTLQAPSLEDVTKQ-p Q96PE2;S1002-p HPTLQAPSLEDVTKQ 0.180476786072839 0.848751113092342 0.217 -0.021 14.6683467930182 1.00023820679315 0.217 -0.021 0.0341322816536723 0.794284667697677 2.8164776811126 -0.273911198391052 Q96PE2 ARHGEF17 Q96PE2.S1002.p_ARHGEF17 Q96PE2_S1002s _1_1_1002_1002 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17482.17482.3 17.35 17.35 6.487 3 1 1 0 715.7169 2065.1694 S1002s TMT10 994 (R) AHPTLQAPsLEDVTK (Q) AHPT(0.0)LQAPS(0.99)LEDVT(0.0)K K:TMT10,s:Phosphorylated S ARHGEF17 223779.6 2 32 30.1 908.19 HUMAN 1 14.6683 -1.0002 HPTPRPASPEPGRVA-p Q8WXD9;S1034-p HPTPRPASPEPGRVA 0.2734486714236 0.0303141976287774 0.206666666666667 0.295333333333333 10.6625280175385 20.5306194445001 0.206666666666667 0.295333333333333 0.0858513637343991 0.00884989372699128 2.0970868117446 3.98990316389659 Q8WXD9 CASKIN1 Q8WXD9.S1034.p_CASKIN1 Q8WXD9_S1034s _1_1_1034_1034 Q8WXD9 Q8WXD9 Caskin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3836.3836.4 11.98 11.98 3.345 2 1 1 0 561.7872 2164.1573 S1034s TMT10 1022 (R) RPPEGHPTPRPAsPEPGR (V) RPPEGHPT(0.0)PRPAS(0.99)PEPGR s:Phosphorylated S CASKIN1 150381.5 2 6 1881.1 109.29 HUMAN 1 10.6625 20.5306 HPVFVPHSAPAVLTH-p Q9H4A3-7;S950-p HPVFVPHSAPAVLTH 0.0717004271880835 0.0479999175850224 -0.377333333333333 -0.249 24.7132630258233 17.6413911276955 -0.378574498770942 -0.249 0.00337810930150634 0.0172131711611028 -4.97151977635723 -3.38734616600224 Q9H4A3 WNK1 Q9H4A3.7.S950.p_WNK1 Q9H4A3-7_S950s _1_1_950_950 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|A0A0B4J299 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16953.16953.4 20.6 20.6 2.892 3 1 1 0 667.0853 2585.3575 S950s TMT10 942 (K) FHPVFVPHsAPAVLTHNNESR (S) FHPVFVPHS(0.99)APAVLT(0.0)HNNES(0.0)R s:Phosphorylated S WNK1 301202.7 2 12 162.1 495.27 HUMAN 1 -24.7133 -17.6414 HPVPIRMTPSKIHMQ-p Q96D71-4;T432-p HPVPIRMTPSKIHMQ 0.592811797449794 0.0174017151144664 0.108333333333333 0.407333333333333 4.18747870518428 24.2464169763059 0.108333333333333 0.407333333333333 0.381287115228922 0.00376147606244697 0.952800934557958 4.84959815955804 Q96D71 REPS1 Q96D71.4.T432.p_REPS1 Q96D71-4_T432t _1_1_432_432 Q96D71-4 Q96D71-4|E9PMG1|Q96D71-2 Isoform 4 of RalBP1-associated Eps domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27429.27429.4 18.8 18.8 2 9 1 1 0 1104.0588 4333.2361 T432t TMT10 401 (K) SPSMPSLNQTWPELNQSSEDTAIVHPVPIRMtPSK (I) S(0.0)PS(0.0)MPS(0.0)LNQT(0.0)WPELNQS(0.0)S(0.0)EDT(0.0)AIVHPVPIRMT(0.99)PS(0.0)K K:TMT10,t:Phosphorylated T REPS1 83819.6 1 47 226.2 425.21 HUMAN 1 4.1875 24.2464 HPYDGNSSDPENWDR-p Q9BSF8;S13-p HPYDGNSSDPENWDR 0.200535848249369 0.0620025025127231 -0.259 0.266333333333333 13.5785832933987 16.0745992421385 -0.259 0.266333333333333 0.043867377366083 0.0246910793850867 -2.61586591684704 3.08033810354512 Q9BSF8 BTBD10 Q9BSF8.S13.p_BTBD10 Q9BSF8_S12sS13s_2_2_12_13 Q9BSF8 Q9BSF8|E9PKU9|E9PN21 BTB/POZ domain-containing protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11566.11566.4 14.17 14.17 4.115 3 2 2 0 683.0402 2569.2017 S12s S13s Acetyl 2 (M) AGRPHPYDGNssDPENWDRK (L) AGRPHPY(0.0)DGNS(0.99)S(0.99)DPENWDRK K:TMT10,s:Phosphorylated S BTBD10 54234.6 2 4 3151.1 59.16 HUMAN 1 -13.5786 16.0746 HPYEDSDSSEDEVDW-p O14730;S127-p HPYEDSDSSEDEVDW 0.391198751974399 0.540672700464305 -0.130333333333333 0.058 7.51963189091796 3.59216710627584 -0.130333333333333 0.058 0.177025899955126 0.437303838425393 -1.55169985031251 0.838190781692214 O14730 RIOK3 O14730.S127.p_RIOK3 O14730_S125sS127sS128s_3_3_125_128 O14730 O14730|O14730-2|B4E1Q4 Serine/threonine-protein kinase RIO3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18166.18390.5 17.07 17.07 3.039 7 3 3 0 980.4446 4658.289 S125s S127s S128s TMT10 119 (K) VHPYEDsDssEDEVDWQDTRDDPYRPAKPVPTPK (K) VHPY(0.0)EDS(0.99)DS(0.99)S(0.99)EDEVDWQDT(0.0)RDDPY(0.0)RPAKPVPT(0.0)PK K:TMT10,s:Phosphorylated S RIOK3 59548.4 6 5 3155.1 59.09 HUMAN 1 -7.5196 3.5922 HQAEKPQSPPKKMKG-p Q92833;S455-p HQAEKPQSPPKKMKG 0.259171377612748 0.00229309782876295 -0.318666666666667 -0.792666666666667 11.1448394285259 40.7043541026439 -0.318666666666667 -0.792666666666667 0.0768273860503856 8.50285141049477e-05 -2.1815036179133 -10.4527552595886 Q92833 JARID2 Q92833.S455.p_JARID2 Q92833_S455s _1_1_455_455 Q92833 Q92833|Q92833-3|Q92833-2 Protein Jumonji HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5511.5511.4 13 13 99 1 1 1 0 646.8579 2504.444 S455s Hydrogen 444 (R) LEEAHQAEKPQsPPKK (M) LEEAHQAEKPQS(1.0)PPKK K:TMT10-Lys-Only,s:Phosphorylated S JARID2 140386.6 2 3 3717.1 44.66 HUMAN 1 -11.1448 -40.7044 HQAPHVHYARLKTLR-p P21860;Y1307-p HQAPHVHYARLKTLR NA 0.150733155545565 1.613 0.472 NA 10.8093423693192 NA 0.472 NA 0.0829976437231417 NA 2.23192780260605 P21860 ERBB3 P21860.Y1307.p_ERBB3 P21860_Y1307y _1_1_1307_1307 P21860 P21860|P21860-4|P21860-5|F8VW56|B3KWG5 Receptor tyrosine-protein kinase erbB-3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.6807.6807.4 12.48 12.48 99 1 1 1 0 521.255 2002.0357 Y1307y TMT10 1294 (R) AFQGPGHQAPHVHyAR (L) AFQGPGHQAPHVHY(1.0)AR y:Phosphorylated Y ERBB3 151518.9 1 3 20.1 77.34 HUMAN 1 NA 10.8093 HQAPQQASPSRDSST-p P11831;S370-p HQAPQQASPSRDSST 0.686263649021844 0.0205441347333786 0.0883333333333333 0.320666666666667 3.06851825136989 23.0890902652872 0.0883333333333333 0.320666666666667 0.493342096280822 0.00491010719438151 0.734295096191492 4.57037548608088 P11831 SRF P11831.S370.p_SRF P11831_S370s _1_1_370_370 P11831 P11831 Serum response factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32609.32616.5 17.65 17.65 1.429 10 1 1 0 1039.7249 5114.6353 S370s TMT10 325 (K) STGSGPVSSGGLMQLPTSFTLMPGGAVAQQVPVQAIQVHQAPQQAsPSR (D) S(0.0)T(0.0)GS(0.0)GPVS(0.0)S(0.0)GGLMQLPT(0.0)S(0.0)FT(0.0)LMPGGAVAQQVPVQAIQVHQAPQQAS(0.99)PS(0.0)R s:Phosphorylated S SRF 51648.8 1 3 1336.1 152.35 HUMAN 1 3.0685 23.0891 HQEMDEGSQSLEKLD-p Q8WYP5-2;S1330-p HQEMDEGSQSLEKLD 0.176872821059086 0.0159775583476844 -0.329333333333333 0.537333333333333 14.9181999133421 24.8156852527668 -0.329333333333333 0.537333333333333 0.032224041535774 0.00329937344547048 -2.86312353104257 4.99107676570593 Q8WYP5 AHCTF1 Q8WYP5.2.S1330.p_AHCTF1 Q8WYP5-2_S1330s _1_1_1330_1330 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8572.8572.3 19.84 19.84 2.144 2 1 1 0 729.0038 2105.0221 S1330s TMT10 1322 (K) EHQEMDEGsQSLEK (L) EHQEMDEGS(0.99)QS(0.0)LEK K:TMT10,s:Phosphorylated S AHCTF1 258049.6 3 18 40.1 829.79 HUMAN 1 -14.9182 24.8157 HQGIEAASDEEDLRW-p Q9UKS6;S276-p HQGIEAASDEEDLRW 0.662921849393668 0.345789626717724 0.105 -0.0943333333333333 3.34044151964515 6.11206832604469 0.105 -0.0943333333333333 0.463399806423278 0.244789715397613 0.788750797917472 -1.30418741562248 Q9UKS6 PACSIN3 Q9UKS6.S276.p_PACSIN3 Q9UKS6_S276s _1_1_276_276 Q9UKS6 Q9UKS6|E9PIY1 Protein kinase C and casein kinase substrate in neurons protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20157.20157.3 20.55 20.55 99 1 1 1 0 879.0777 2555.2476 S276s TMT10 267 (R) DLHQGIEAAsDEEDLRWWR (S) DLHQGIEAAS(1.0)DEEDLRWWR s:Phosphorylated S PACSIN3 48828.3 4 3 547.1 275.62 HUMAN 1 3.3404 -6.1121 HQKQSRITPIQKPRG-p A0A0A0MT49;T353-p HQKQSRITPIQKPRG 0.498868510893363 0.242950702794042 -0.0953333333333333 0.196666666666667 5.56347710213763 8.09590402037454 -0.0953333333333333 0.196666666666667 0.277748863005709 0.155027804983189 -1.20638966382056 1.65126339795865 A0A0A0MT49 NotFound A0A0A0MT49.T353.p_NotFound A0A0A0MT49_T353t _1_1_353_353 A0A0A0MT49 A0A0A0MT49|Q9HBD4|P51532|P51532-4 Transcription activator BRG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8089.8089.4 10.14 7.82 2.731 2 1 1 0 466.2753 1782.1114 T353t TMT10 349 (K) QSRItPIQKPR (G) QS(0.0)RIT(0.99)PIQKPR K:TMT10,t:Phosphorylated T SMARCA4 189484.7 1 3 392.1 331.85 HUMAN 1 -5.5635 8.0959 HQKSLANSGGWVPIK-p Q9Y6R9;S473-p HQKSLANSGGWVPIK 0.253566244688488 0.00357287195344666 -0.189666666666667 -0.624666666666667 11.3494509904101 36.464557192928 -0.189666666666667 -0.624666666666667 0.0732917178370239 0.000225706611444393 -2.21744732646306 -8.64932523499296 Q9Y6R9 CCDC61 Q9Y6R9.S473.p_CCDC61 Q9Y6R9_S473s _1_1_473_473 Q9Y6R9 Q9Y6R9|Q9Y6R9-2 Coiled-coil domain-containing protein 61 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24016.24016.3 14.27 14.27 4.64 2 1 1 0 589.6592 1686.9943 S473s TMT10 469 (K) SLANsGGWVPIK (E) S(0.0)LANS(0.99)GGWVPIK K:TMT10,s:Phosphorylated S CCDC61 57595.5 2 4 2443.1 83.27 HUMAN 1 -11.3495 -36.4646 HQKTFSVSLQKQNKM-p Q8TAG9;S231-p HQKTFSVSLQKQNKM 0.223329192805893 0.0432276990659245 -0.239666666666667 -0.461 12.5116714466278 18.2778326948352 -0.239666666666667 -0.461 0.0560832089956544 0.0148667736934871 -2.42343370071746 -3.51577864621754 Q8TAG9 EXOC6 Q8TAG9.S231.p_EXOC6 Q8TAG9_S231s _1_1_231_231 Q8TAG9 Q8TAG9|Q8TAG9-2|E7EW84 Exocyst complex component 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20207.20207.3 7.73 5.95 6.512 3 1 1 0 483.271 1367.8299 S231s TMT10 227 (K) TFSVsLQK (Q) T(0.0)FS(0.0)VS(0.99)LQK K:TMT10,s:Phosphorylated S EXOC6 94462.3 1 2 5465.1 19.07 HUMAN 1 -12.5117 -18.2778 HQKYCLKSPGQMTVP-p Q8NCD3;S595-p HQKYCLKSPGQMTVP 0.792593719033847 0.0159974837678997 0.041 -0.554 1.94764891685273 24.8093974404079 0.041 -0.554 0.638609108077237 0.00330415381164786 0.497177051010104 -4.98949869954251 Q8NCD3 HJURP Q8NCD3.S595.p_HJURP Q8NCD3_S595s _1_1_595_595 Q8NCD3 Q8NCD3|Q8NCD3-2|Q8NCD3-3 Holliday junction recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26916.26916.3 17.37 17.37 3.941 4 1 1 0 776.7317 2248.2081 S595s TMT10 595 (K) sPGQMTVPLCIGVSTDK (A) S(0.99)PGQMT(0.0)VPLCIGVS(0.0)T(0.0)DK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HJURP 84336.4 2 10 596.1 263.83 HUMAN 1 1.9476 -24.8094 HQLESSLSPVEVFAK-p Q9H410;S30-p HQLESSLSPVEVFAK 0.658549271083176 0.193157655351418 0.0663333333333333 -0.142333333333333 3.40396323938544 9.38941414266993 0.0663333333333334 -0.142333333333333 0.456671255101578 0.115095564081802 0.801332545460228 -1.87508955292901 Q9H410 DSN1 Q9H410.S30.p_DSN1 Q9H410_S28sS30s_2_2_28_30 Q9H410 Q9H410|Q9H410-4 Kinetochore-associated protein DSN1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21051.21051.3 18.85 18.85 1.122 4 2 2 0 881.4279 2482.3342 S28s S30s TMT10 20 (K) THDHQLESsLsPVEVFAK (T) T(0.0)HDHQLES(0.0)S(0.99)LS(0.99)PVEVFAK K:TMT10,s:Phosphorylated S DSN1 40408.8 2 9 1406.1 145.92 HUMAN 1 3.404 -9.3894 HQLFKGFSFVATSIA-p Q9UK32-2;S389-p HQLFKGFSFVATSIA 0.014110712010784 0.420213482885476 -1.27733333333333 -0.114 44.974785559394 5.01294075707891 -1.27733333333333 -0.114 3.18069073670072e-05 0.315286898453629 -12.6464403056214 -1.10620497692964 Q9UK32 RPS6KA6 Q9UK32.2.S389.p_RPS6KA6 Q9UK32-2_S389s _1_1_389_389 Q9UK32-2 Q9UK32|Q9UK32-2 Isoform 2 of Ribosomal protein S6 kinase alpha-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33835.33835.3 13.83 13.83 5.88 4 1 1 0 696.356 2007.0839 S389s TMT10 387 (K) GFsFVATSIAEEYK (I) GFS(0.99)FVAT(0.0)S(0.0)IAEEY(0.0)K K:TMT10,s:Phosphorylated S RPS6KA6 84661.6 1 10 1026.2 186.86 HUMAN 1 -44.9748 -5.0129 HQLFRGFSFVATGLM-p Q15418;S380-p HQLFRGFSFVATGLM 0.0293016125253012 0.00276797995168746 -0.738333333333333 -0.83 35.7944464308285 38.7336662913412 -0.738333333333334 -0.83 0.000263363361578939 0.000133854621659696 -8.40811456548957 -9.57611653155756 Q15418 RPS6KA1 Q15418.S380.p_RPS6KA1 Q15418_S380s _1_1_380_380 Q15418 Q15418-2|E9PGT3|Q15418-4|Q15418-3 Ribosomal protein S6 kinase alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27936.27936.3 22.47 17.87 4.321 2 1 1 0 789.0605 2285.2 S380s TMT10 378 (R) GFsFVATGLMEDDGKPR (A) GFS(0.99)FVAT(0.0)GLMEDDGKPR K:TMT10,s:Phosphorylated S RPS6KA1 83120.8 5 4 1026.1 186.86 HUMAN 1 -35.7944 -38.7337 HQMVRTDSREQKLDA-p P40692;S388-p HQMVRTDSREQKLDA 0.251354731881757 0.0134622841664222 -0.430666666666667 0.378 11.4421911072234 26.0121227399618 -0.430666666666667 0.378 0.0717432240257034 0.00250488461892188 -2.23376712652081 5.2978049126339 P40692 MLH1 P40692.S388.p_MLH1 P40692_S388s _1_1_388_388 P40692 P40692|P40692-3|P40692-2 DNA mismatch repair protein Mlh1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27434.27434.5 21.39 21.39 1.118 6 1 1 0 894.095 4386.469 S388s TMT10 386 (R) TDsREQKLDAFLQPLSKPLSSQPQAIVTEDK (T) T(0.0)DS(0.99)REQKLDAFLQPLS(0.0)KPLS(0.0)S(0.0)QPQAIVT(0.0)EDK K:TMT10,s:Phosphorylated S MLH1 85227 6 2 2162.1 94.86 HUMAN 1 -11.4422 26.0121 HQPKKKGSPAKPSEG-p P56181-2;S232-p HQPKKKGSPAKPSEG 0.202089387369954 0.658949331008781 0.289666666666667 0.0703333333333333 13.4835430798748 2.47812786119604 0.289666666666667 0.0703333333333333 0.0448379441838836 0.565180558019279 2.59857481451137 0.612186023813024 P56181 NDUFV3 P56181.2.S232.p_NDUFV3 P56181-2_S232s _1_1_232_232 P56181-2 P56181-2 Isoform 2 of NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4028.4028.3 11.5 11.5 3.438 2 1 1 0 508.605 1443.832 S232s TMT10 231 (K) GsPAKPSEGR (E) GS(0.99)PAKPS(0.0)EGR K:TMT10,s:Phosphorylated S NDUFV3 51040.2 3 7 1273.1 159.36 HUMAN 1 13.4835 2.4781 HQPPKPGSPGRPACP-p Q96F63;S212-p HQPPKPGSPGRPACP 0.563957418067227 0.296128583215862 0.0763333333333333 -0.132333333333333 4.5816823501526 6.97697758849023 0.0763333333333333 -0.132333333333333 0.348202403848266 0.200586749706977 1.02680914294052 -1.45658156377421 Q96F63 CCDC97 Q96F63.S212.p_CCDC97 Q96F63_S212s _1_1_212_212 Q96F63 Q96F63 Coiled-coil domain-containing protein 97 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19934.19954.5 25.46 20.01 2.366 6 1 1 0 774.003 3786.0161 S212s TMT10 202 (R) TPTHQPPKPGsPGRPACPLSNLLLQSYEER (E) T(0.0)PT(0.0)HQPPKPGS(0.99)PGRPACPLS(0.0)NLLLQS(0.0)Y(0.0)EER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CCDC97 39288.2 5 1 1741.1 118.22 HUMAN 1 4.5817 -6.977 HQQDSDLSAACSDAD-p Q9H9J4;S1222-p HQQDSDLSAACSDAD 0.676419919699668 0.310159388884265 -0.0703333333333333 0.200666666666667 3.18111088262984 6.71719465850425 -0.0703333333333333 0.200666666666667 0.480716370196015 0.212951416946714 -0.756963910849145 1.41103886776792 Q9H9J4 USP42 Q9H9J4.S1222.p_USP42 Q9H9J4_S1219sS1222sS1226s_3_3_1219_1226 Q9H9J4 Q9H9J4|Q9H9J4-2 Ubiquitin carboxyl-terminal hydrolase 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8147.8357.3 14.93 14.93 99 3 3 3 0 832.3148 2255.0308 S1219s S1222s S1226s TMT10 1215 (R) HQQDsDLsAACsDADLHR (H) HQQDS(1.0)DLS(1.0)AACS(1.0)DADLHR C:Carbamidomethylation,s:Phosphorylated S USP42 146872.9 1 14 255.1 399.37 HUMAN 1 -3.1811 6.7172 HQQIPLHSPPSKVSH-p Q8NDX5-7;S327-p HQQIPLHSPPSKVSH 0.945476641251706 0.00291728946152066 -0.0106666666666667 -0.667666666666667 0.478523800850584 38.2762008555699 -0.0106666666666667 -0.667666666666667 0.895669158402811 0.000148723608571426 -0.137417681664525 -9.38241291087424 Q8NDX5 PHC3 Q8NDX5.7.S327.p_PHC3 Q8NDX5-7_S327s _1_1_327_327 Q8NDX5-7 Q8NDX5-7|Q8NDX5-2|E7EX82 Isoform 7 of Polyhomeotic-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8789.9198.3 18.88 18.88 7.131 2 1 1 0 636.3483 1827.0641 S327s TMT10 320 (K) HQQIPLHsPPSK (V) HQQIPLHS(0.99)PPS(0.0)K K:TMT10,s:Phosphorylated S PHC3 108276.8 6 9 439.1 312.22 HUMAN 1 -0.4785 -38.2762 HQQPFQVSPQPFLNR-p Q76L83;S600-p HQQPFQVSPQPFLNR 0.949924446897377 0.0873895513449699 -0.00966666666666668 -0.245666666666667 0.442146462613608 14.0141163194159 -0.00966666666666669 -0.245666666666667 0.903202963199279 0.0396815262692982 -0.12742837662808 -2.69389265597236 Q76L83 ASXL2 Q76L83.S600.p_ASXL2 Q76L83_S600s _1_1_600_600 Q76L83 Q76L83|E7EWD6|Q76L83-2 Putative Polycomb group protein ASXL2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15119.15119.4 13.85 13.85 99 1 1 1 0 647.8228 2508.3058 S600s TMT10 592 (R) QHQQPFQVsPQPFLNRGDR (I) QHQQPFQVS(1.0)PQPFLNRGDR s:Phosphorylated S ASXL2 155129.4 3 10 293.1 380.51 HUMAN 1 -0.4421 -14.0141 HQQPPHNSLPKPEPE-p Q5VTI5;S217-p HQQPPHNSLPKPEPE 0.751121538575325 0.10901219107674 0.0646666666666667 -0.244 2.36876281055999 12.7167315812251 0.0646666666666667 -0.244 0.579593783760853 0.0534966813923559 0.589002528930549 -2.4588324982164 Q5VTI5 NotFound Q5VTI5.S217.p_NotFound Q5VTI5_S217s _1_1_217_217 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6181.6181.4 14.92 14.92 99 1 1 1 0 710.3725 2758.5356 S217s TMT10 209 (K) HHQQPPHNsLPKPEPEAK (T) HHQQPPHNS(1.0)LPKPEPEAK K:TMT10,s:Phosphorylated S PLEKHA6 119745.7 1 6 52.1 743.36 HUMAN 1 2.3688 -12.7167 HQQQLLASPGSSTVD-p F2Z2X4;S521-p HQQQLLASPGSSTVD 0.247049795569645 0.539314909739137 -0.298666666666667 0.0636666666666667 11.5950003111726 3.60755875703784 -0.298666666666667 0.0636666666666667 0.0692627879810475 0.43575675111679 -2.26069797017906 0.841196690150942 F2Z2X4 NotFound F2Z2X4.S521.p_NotFound F2Z2X4_S521s _1_1_521_521 F2Z2X4 Q9C0E2|F2Z2X4 Exportin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11131.11131.2 19.18 19.18 2.481 4 1 1 0 1174.6029 2268.2348 S521s TMT10 514 (R) HQQQLLAsPGSSTVDNK (M) HQQQLLAS(0.99)PGS(0.0)S(0.0)T(0.0)VDNK K:TMT10,s:Phosphorylated S XPO4 131406.3 2 2 4875.1 25.56 HUMAN 1 -11.595 3.6076 HQRCLAHSLVGTPNY-p O95835;S909-p HQRCLAHSLVGTPNY 0.10832064716918 0.740997976838511 -0.333 0.0636666666666667 20.2510199191009 1.79531874222768 -0.333 0.0636666666666667 0.00943839194292037 0.661405993059735 -3.93303023868197 0.46292937495926 O95835 LATS1 O95835.S909.p_LATS1 O95835_S909s _1_1_909_909 O95835 O95835|Q9NRM7 Serine/threonine-protein kinase LATS1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28170.28170.3 18.61 17.31 3.301 3 1 1 0 844.7791 2452.3584 S909s TMT10 905 (R) CLAHsLVGTPNYIAPEVLLR (T) CLAHS(0.99)LVGT(0.0)PNY(0.0)IAPEVLLR C:Carbamidomethylation,s:Phosphorylated S LATS1 127380.9 1 7 824.1 217.64 HUMAN 1 -20.251 1.7953 HQRGLSASYLEPDRY-p Q8WVC0;S568-p HQRGLSASYLEPDRY 0.790671547034773 0.00670233800375624 0.049 0.622666666666667 1.96876607960812 31.2250268430952 0.049 0.622666666666667 0.635511468147623 0.000754218734119475 0.501873901007654 6.80230851942594 Q8WVC0 LEO1 Q8WVC0.S568.p_LEO1 Q8WVC0_S568s _1_1_568_568 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28249.28249.3 15.65 15.65 1.19 6 1 1 0 1213.5873 3558.7739 S568s TMT10 564 (R) GLSAsYLEPDRYDEEEEGEESISLAAIK (N) GLS(0.0)AS(0.99)Y(0.0)LEPDRY(0.0)DEEEEGEES(0.0)IS(0.0)LAAIK K:TMT10,s:Phosphorylated S LEO1 75516.9 6 11 514.1 286.88 HUMAN 1 1.9688 31.225 HQRHIALSPRYLNRK-p Q3B726;S60-p HQRHIALSPRYLNRK 0.25567774491366 0.074650950491324 0.204333333333333 0.307666666666667 11.2595298214116 14.956649965265 0.204333333333333 0.307666666666667 0.0748250503686864 0.0319400067419078 2.2016406765659 2.86845962759078 Q3B726 TWISTNB Q3B726.S60.p_TWISTNB Q3B726_S60s _1_1_60_60 Q3B726 Q3B726 DNA-directed RNA polymerase I subunit RPA43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8215.8215.2 10.91 8.57 99 1 1 1 0 551.8021 1022.6308 S60s TMT10 56 (R) HIALsPR (Y) HIALS(1.0)PR s:Phosphorylated S TWISTNB 37945.1 4 2 540.1 277.01 HUMAN 1 11.2595 14.9566 HQSQHRKSVRPGASY-p F8W0Q9;S190-p HQSQHRKSVRPGASY 0.852853821980128 0.885205589977992 -0.0726666666666667 0.017 1.33923989919331 0.744253850221697 -0.0726666666666667 0.017 0.734642433788725 0.842509128253222 -0.356934327652826 0.208416817451545 F8W0Q9 NotFound F8W0Q9.S190.p_NotFound F8W0Q9_S190s _1_1_190_190 F8W0Q9 Q8NEY8-3|F8W0Q9|Q8NEY8-2|Q8NEY8-8|B7Z8L1|Q8NEY8-6|Q8NEY8-5 Periphilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7725.7725.3 13.5 7.11 4.154 3 1 1 0 501.6082 1422.8469 S190s TMT10 190 (K) sVRPGASYK (R) S(0.99)VRPGAS(0.0)Y(0.0)K K:TMT10,s:Phosphorylated S PPHLN1 44796.3 1 11 663.1 251.09 HUMAN 1 -1.3392 0.7443 HQVSDDLSETDISNE-p Q8NFW9;S561-p HQVSDDLSETDISNE 0.886118944763575 0.0174864042819418 0.0326666666666666 0.431333333333333 1.02608157174534 24.2208916666471 0.0326666666666667 0.431333333333333 0.789572188987916 0.00378364893195313 0.280407980096004 4.84331964946901 Q8NFW9 MYRIP Q8NFW9.S561.p_MYRIP Q8NFW9_S557sS561s_2_2_557_561 Q8NFW9 Q8NFW9|Q8NFW9-2|Q8NFW9-6|Q8NFW9-3|Q8NFW9-4|Q8NFW9-5 Rab effector MyRIP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20368.20368.4 18.56 18.56 1.265 9 2 2 0 1084.9819 4176.9945 S557s S561s TMT10 550 (R) DLDTHQVsDDLsETDISNEARDPQTLTDTTEEK (R) DLDT(0.0)HQVS(0.99)DDLS(0.99)ET(0.0)DIS(0.0)NEARDPQT(0.0)LT(0.0)DT(0.0)T(0.0)EEK K:TMT10,s:Phosphorylated S MYRIP 96845.6 1 8 2094.1 97.91 HUMAN 1 1.0261 24.2209 HQYFMTEYVATRWYR-p Q13164;Y221-p HQYFMTEYVATRWYR 0.241962758828852 0.0406826297871355 -0.218333333333333 -0.273333333333333 11.7835372424812 18.6417387633801 -0.218333333333333 -0.273333333333333 0.0663202684922458 0.0136718134436065 -2.29399797576588 -3.59025318953161 Q13164 MAPK7 Q13164.Y221.p_MAPK7 Q13164_Y221y _1_1_221_221 Q13164 Q13164|Q13164-2|Q13164-3|Q13164-4 Mitogen-activated protein kinase 7 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.21430.21477.3 26.33 26.33 2.096 6 1 1 0 890.7396 2590.2268 Y221y TMT10 206 (R) GLCTSPAEHQYFMTEyVATR (W) GLCT(0.0)S(0.0)PAEHQY(0.0)FMT(0.0)EY(0.99)VAT(0.0)R C:Carbamidomethylation,y:Phosphorylated Y MAPK7 88841.3 4 1 111.1 26.42 HUMAN 1 -11.7835 -18.6417 HRANLACSPLGGGEP-p Q9ULL5-3;S332-p HRANLACSPLGGGEP 0.735825275323593 0.361255462794964 0.051 0.0916666666666667 2.52381975483816 5.86635996884662 0.051 0.0916666666666667 0.559265493745113 0.259038313036632 0.621916553388011 1.26042630305144 Q9ULL5 PRR12 Q9ULL5.3.S332.p_PRR12 Q9ULL5-3_S332s _1_1_332_332 Q9ULL5-3 Q9ULL5-3 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16333.16333.3 19.42 16.98 3.316 3 1 1 0 864.4243 2511.2914 S332s TMT10 327 (R) ANLACsPLGGGEPSPGAGEPSK (A) ANLACS(0.99)PLGGGEPS(0.0)PGAGEPS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRR12 212010 3 3 182.1 477.91 HUMAN 1 2.5238 5.8664 HRASPCKSPAPEAAL-p Q32MQ0;S140-p HRASPCKSPAPEAAL 0.0782221681558717 0.333801007322063 0.347666666666667 0.131333333333333 23.6226790674042 6.3157701140488 0.347666666666667 0.131333333333333 0.00434242267001427 0.233573188110748 4.70319031640582 1.34029167987184 Q32MQ0 ZNF750 Q32MQ0.S140.p_ZNF750 Q32MQ0_S140s _1_1_140_140 Q32MQ0 Q32MQ0 Zinc finger protein 750 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16077.16077.3 17.57 17.57 2.351 2 1 1 0 953.4949 2778.4973 S140s TMT10 135 (R) ASPCKsPAPEAALGAQPALEGAAR (P) AS(0.0)PCKS(0.99)PAPEAALGAQPALEGAAR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF750 78215 2 1 2205.1 93.47 HUMAN 1 23.6227 6.3158 HRAVPAPSPGPTHNS-p Q6ZRV2;S1061-p HRAVPAPSPGPTHNS 0.259805946096148 0.457655910981217 0.162333333333333 0.0973333333333333 11.103247245771 4.52558561033793 0.162333333333333 0.0973333333333333 0.0775666928956888 0.352729220781868 2.17420731688053 1.0161648842536 Q6ZRV2 FAM83H Q6ZRV2.S1061.p_FAM83H Q6ZRV2_S1061sS1068s_2_2_1061_1068 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19854.19854.5 17.01 13.28 1.184 4 2 2 0 845.6306 4064.1842 S1061s S1068s TMT10 1056 (R) AVPAPsPGPTHNsPELGRPPAAGVLAPDMSDKDK (C) AVPAPS(0.99)PGPT(0.0)HNS(0.99)PELGRPPAAGVLAPDMS(0.0)DKDK K:TMT10,s:Phosphorylated S FAM83H 127633.5 5 43 7.1 1347.23 HUMAN 1 11.1032 4.5256 HRDGQRKSVSSSPWL-p Q9NRY4;S1070-p HRDGQRKSVSSSPWL 0.052392933947751 0.621079025569967 -0.482 0.115333333333333 27.8184799054087 2.81292505823897 -0.482 0.115333333333333 0.00165254011036931 0.523247900188873 -5.79488833071293 0.682059846477507 Q9NRY4 ARHGAP35 Q9NRY4.S1070.p_ARHGAP35 Q9NRY4_S1070s _1_1_1070_1070 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33627.33627.4 14.64 14.64 1.146 6 1 1 0 866.4099 3382.6553 S1070s TMT10 1070 (K) sVSSSPWLPQDGFDPSDYAEPMDAVVK (P) S(0.99)VS(0.0)S(0.0)S(0.0)PWLPQDGFDPS(0.0)DY(0.0)AEPMDAVVK K:TMT10,s:Phosphorylated S ARHGAP35 172051.4 1 7 247.1 410.47 HUMAN 1 -27.8185 2.8129 HRDKERQSPFHGNHA-p Q6P1L5;S307-p HRDKERQSPFHGNHA 0.33341610353663 0.501030654526813 0.137333333333333 -0.0726666666666667 8.90302168779905 4.01752230603641 0.137333333333333 -0.0726666666666667 0.128735353891328 0.396504179386653 1.79157546493767 -0.920321148212072 Q6P1L5 FAM117B Q6P1L5.S307.p_FAM117B Q6P1L5_S307s _1_1_307_307 Q6P1L5 Q6P1L5 Protein FAM117B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8517.8517.4 20.66 15.14 99 1 1 1 0 756.8812 2944.5364 S307s TMT10 304 (K) ERQsPFHGNHAAINQCQAPVPK (S) ERQS(1.0)PFHGNHAAINQCQAPVPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM117B 62537.3 2 8 492.1 293.79 HUMAN 1 8.903 -4.0175 HRDTHPGSPGSPGPA-p Q8N0Y2;S232-p HRDTHPGSPGSPGPA 0.157385925988378 0.271308117772703 0.289666666666667 -0.110333333333333 16.1095241952792 7.46121681339246 0.289666666666667 -0.110333333333333 0.0244933157122392 0.179423084586375 3.08924840852695 -1.54107513688306 Q8N0Y2 ZNF444 Q8N0Y2.S232.p_ZNF444 Q8N0Y2_S232s _1_1_232_232 Q8N0Y2 Q8N0Y2|Q8N0Y2-2 Zinc finger protein 444 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9988.9988.4 17.96 17.96 4.676 3 1 1 0 573.0473 2209.2039 S232s TMT10 227 (R) DTHPGsPGSPGPALRPLPAR (E) DT(0.0)HPGS(0.99)PGS(0.0)PGPALRPLPAR s:Phosphorylated S ZNF444 35830.9 5 3 2043.1 101.06 HUMAN 1 16.1095 -7.4612 HRDVFYYSPSGKKFR-p O95983;S37-p HRDVFYYSPSGKKFR 0.338386511533049 0.0311284574003059 0.173 -0.303333333333333 8.75375724662563 20.3583067893414 0.173 -0.303333333333333 0.133236825099145 0.00920808503064524 1.76573797954353 -3.95248893129803 O95983 MBD3 O95983.S37.p_MBD3 O95983_S37s _1_1_37_37 O95983 O95983 Methyl-CpG-binding domain protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20437.20437.3 11.72 11.72 1.173 4 1 1 0 567.6157 1620.8674 S37s TMT10 32 (R) DVFYYsPSGK (K) DVFY(0.0)Y(0.0)S(0.99)PS(0.0)GK K:TMT10,s:Phosphorylated S MBD3 33071.7 5 1 2405.1 84.93 HUMAN 1 8.7538 -20.3583 HRELVLSSPEDLTQD-p E9PGC8;S765-p HRELVLSSPEDLTQD 0.929907092825432 0.373430570013424 0.0136666666666667 0.107333333333333 0.626093540759818 5.67552478013226 0.0136666666666667 0.107333333333333 0.865746303534391 0.270674611424687 0.177265531366537 1.2262608359114 E9PGC8 NotFound E9PGC8.S765.p_NotFound E9PGC8_S764sS765s_2_2_764_765 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30850.31591.4 18.81 18.81 13.901 3 2 2 0 825.3895 3138.6029 S764s S765s TMT10 760 (R) ELVLssPEDLTQDFEEMKREER (A) ELVLS(0.99)S(0.99)PEDLT(0.0)QDFEEMKREER K:TMT10,s:Phosphorylated S MAP1A 332906.7 11 47 20.1 1016.98 HUMAN 1 0.6261 5.6755 HRFRRSRSPMHYMYR-p Q14966;S510-p HRFRRSRSPMHYMYR 0.214459963931144 0.898912157702689 0.617333333333333 0.0126666666666667 12.8887043276874 0.648376665637174 0.617333333333334 0.0126666666666667 0.0514197034025987 0.861315640224176 2.49103124858649 0.183174968952488 Q14966 ZNF638 Q14966.S510.p_ZNF638 Q14966_S508sS510s_2_2_508_510 Q14966 Q14966|Q14966-3|Q14966-4|A0A096LPH6|Q14966-2 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6925.6925.4 10.72 10.72 10.72 4 2 2 0 435.9298 1580.7573 S508s S510s Hydrogen 508 (R) sRsPMHYMYRPR (S) S(0.99)RS(0.99)PMHY(0.0)MY(0.0)RPR s:Phosphorylated S ZNF638 222047.2 3 27 165.1 494.68 HUMAN 1 12.8887 0.6484 HRINFDKYHPGYFGK-p P46776;Y48-p HRINFDKYHPGYFGK 0.130648315501849 0.664253450525119 0.371666666666667 0.0713333333333333 18.2790165969461 2.43250540640246 0.371666666666667 0.0713333333333333 0.0148627215107655 0.571149050784447 3.51895456007018 0.602511599279052 P46776 RPL27A P46776.Y48.p_RPL27A P46776_Y48y _1_1_48_48 P46776 P46776|E9PLL6 60S ribosomal protein L27a GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12925.12925.3 15.31 15.31 15.31 2 1 1 0 502.9233 1426.7883 Y48y TMT10 48 (K) yHPGYFGK (V) Y(0.99)HPGY(0.0)FGK K:TMT10,y:Phosphorylated Y RPL27A 16675.2 1 1 220.1 16.23 HUMAN 1 18.279 2.4325 HRITVQASPGLDRRR-p Q16584;S507-p HRITVQASPGLDRRR 0.329974972036682 0.553549662052666 -0.159666666666667 0.0756666666666667 9.00086876902714 3.45966090513261 -0.159666666666667 0.0756666666666667 0.125867359970263 0.450851905448946 -1.80851323823952 0.812199110735878 Q16584 MAP3K11 Q16584.S507.p_MAP3K11 Q16584_S507s _1_1_507_507 Q16584 Q16584 Mitogen-activated protein kinase kinase kinase 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14840.14840.3 10.94 8.96 5.084 2 1 1 0 489.2594 1385.795 S507s TMT10 502 (R) ITVQAsPGLDR (R) IT(0.0)VQAS(0.99)PGLDR s:Phosphorylated S MAP3K11 93313.9 1 4 536.1 278.53 HUMAN 1 -9.0009 3.4597 HRKQDAETPPPPDPP-p Q86WR7;T146-p HRKQDAETPPPPDPP 0.590371749401967 0.0441285833696939 -0.084 -0.254 4.21833527522378 18.1497287821461 -0.084 -0.254 0.378587676016716 0.0153118308141463 -0.958641222131842 -3.48974414090311 Q86WR7 PROSER2 Q86WR7.T146.p_PROSER2 Q86WR7_T146t _1_1_146_146 Q86WR7 Q86WR7|Q86WR7-2 Proline and serine-rich protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22709.22709.5 18.37 18.37 3.793 4 1 1 0 806.8266 3950.1428 T146t TMT10 141 (R) KQDAEtPPPPDPPAPETLLAPPPLPSTPDPPRR (E) KQDAET(0.99)PPPPDPPAPET(0.0)LLAPPPLPS(0.0)T(0.0)PDPPRR K:TMT10,t:Phosphorylated T PROSER2 46143.5 2 3 734.1 235.52 HUMAN 1 -4.2183 -18.1497 HRKREDCSPADKPYI-p Q96DG6;S223-p HRKREDCSPADKPYI 0.308410963773237 0.100788768328285 0.182 0.189333333333333 9.54895109225023 13.1657047310835 0.182 0.189333333333333 0.110944273544426 0.0482424690494719 1.90344275659045 2.53955470176858 Q96DG6 CMBL Q96DG6.S223.p_CMBL Q96DG6_S223s _1_1_223_223 Q96DG6 Q96DG6 Carboxymethylenebutenolidase homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7293.7293.5 8.28 8.28 8.282 2 1 1 0 595.5091 2893.5557 S223s TMT10 218 (R) KREDCsPADKPYIDEARR (N) KREDCS(0.99)PADKPY(0.0)IDEARR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CMBL 28390 1 2 5324.1 20.53 HUMAN 1 9.549 13.1657 HRKYREYSPPYAPSH-p Q9UPT8;S159-p HRKYREYSPPYAPSH 0.275495542064131 0.0262131533787029 0.205 0.381 10.5935054092375 21.4997173195437 0.205 0.381 0.0872267033571681 0.00707991865777942 2.08503820389539 4.20413943766624 Q9UPT8 ZC3H4 Q9UPT8.S159.p_ZC3H4 Q9UPT8_S159s _1_1_159_159 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13550.13772.5 20.07 15.44 2.187 8 1 1 0 690.7482 3369.7421 S159s TMT10 155 (K) YREYsPPYAPSHQQYPPSHATPLPK (K) Y(0.0)REY(0.0)S(0.99)PPY(0.0)APS(0.0)HQQY(0.0)PPS(0.0)HAT(0.0)PLPK K:TMT10,s:Phosphorylated S ZC3H4 140881.7 8 1 427.1 318.7 HUMAN 1 10.5935 21.4997 HRLEKAASREEPIEW-p P39880-3;S1507-p HRLEKAASREEPIEW 0.511272956349633 0.0360386859092361 0.123 0.349666666666667 5.38516590545641 19.4252502870479 0.123 0.349666666666667 0.289389926469358 0.0114149751739646 1.1741968429039 3.75329016370897 P39880 CUX1 P39880.3.S1507.p_CUX1 P39880-3_S1507s _1_1_1507_1507 P39880-3 P39880-3|P39880-2|P39880-5|P39880-4|P39880-6 Isoform 3 of Homeobox protein cut-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25915.25915.2 9.84 9.84 99 1 1 1 0 886.9094 1692.8431 S1507s TMT10 1505 (K) AAsREEPIEWEF (-) AAS(1.0)REEPIEWEF s:Phosphorylated S CUX1 166084.5 1 10 1194.1 167.77 HUMAN 1 5.3852 19.4253 HRLSRRRSKDVEFQD-p O60292;S146-p HRLSRRRSKDVEFQD 0.582575200829836 0.032805640126017 0.0953333333333333 0.289 4.31866140884653 20.0215043944133 0.0953333333333333 0.289 0.369942186531603 0.00995060669011973 0.977572679841408 3.87993136718401 O60292 SIPA1L3 O60292.S146.p_SIPA1L3 O60292_S146s _1_1_146_146 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15440.15440.3 18.05 18.05 99 1 1 1 0 591.6124 1692.8543 S146s Hydrogen 146 (R) sKDVEFQDGWPR (S) S(1.0)KDVEFQDGWPR K:TMT10-Lys-Only,s:Phosphorylated S SIPA1L3 195918.6 3 4 144.1 520.25 HUMAN 1 4.3187 20.0215 HRLTDVGSVKRVTSG-p Q13393;S499-p HRLTDVGSVKRVTSG 0.0995388440058061 0.170111781453783 0.454 0.404333333333333 21.19397991231 10.1147402891535 0.454 0.404333333333333 0.00759629826509023 0.0973926024979405 4.14000655149211 2.00083240800656 Q13393 PLD1 Q13393.S499.p_PLD1 Q13393_S499s _1_1_499_499 Q13393 Q13393|Q13393-2|Q13393-4|Q13393-3 Phospholipase D1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11667.11667.3 9.83 4.79 2.576 2 1 1 0 504.9575 1432.8888 S499s TMT10 494 (R) LTDVGsVKR (V) LT(0.0)DVGS(0.99)VKR K:TMT10,s:Phosphorylated S PLD1 124866.5 1 9 2678.1 74.24 HUMAN 1 21.194 10.1147 HRNDYDKSPIKPKMW-p Q9P2Q2;S604-p HRNDYDKSPIKPKMW 0.238586994228823 0.00354425123931495 -0.188666666666667 -0.849 11.9049713322102 36.5588743625592 -0.188666666666667 -0.849 0.0644915576943422 0.000220857709463581 -2.31549042914508 -8.68619421551317 Q9P2Q2 FRMD4A Q9P2Q2.S604.p_FRMD4A Q9P2Q2_S604s _1_1_604_604 Q9P2Q2 Q9P2Q2 FERM domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11136.11136.4 11.4 11.4 4.898 2 1 1 0 576.0816 2221.3362 S604s TMT10 599 (R) NDYDKsPIKPK (M) NDY(0.0)DKS(0.99)PIKPK K:TMT10,s:Phosphorylated S FRMD4A 116026.8 4 4 787.1 225.06 HUMAN 1 -11.905 -36.5589 HRNERKLSVLGKDGK-p Q8NFC6;S800-p HRNERKLSVLGKDGK 0.111154875717767 0.891432738187254 -0.589666666666667 0.0136666666666667 19.9353485794494 0.700726363552958 -0.589666666666667 0.0136666666666667 0.0101499789613689 0.85099569608712 -3.86508919608602 0.197008053951186 Q8NFC6 BOD1L1 Q8NFC6.S800.p_BOD1L1 Q8NFC6_S800s _1_1_800_800 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17588.17588.3 8.37 8.37 99 1 1 1 0 504.6555 1431.9866 S800s TMT10 798 (R) KLsVLGK (D) KLS(1.0)VLGK K:TMT10,s:Phosphorylated S BOD1L1 332628.7 2 10 97.1 603.4 HUMAN 1 -19.9353 0.7007 HRPELIDYGKLRKDD-p P12814-4;Y193-p HRPELIDYGKLRKDD 0.0668477670009952 0.0245253641289408 -0.571333333333333 -0.346333333333333 25.3203909256407 21.9219349475324 -0.571333333333333 -0.346333333333333 0.00293738523439793 0.00642401439209094 -5.12538231538836 -4.2995747424899 P12814 ACTN1 P12814.4.Y193.p_ACTN1 P12814-4_Y193y _1_1_193_193 P12814-4 P12814-4|P12814-3|P12814-2|H9KV75 Isoform 4 of Alpha-actinin-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11184.11264.3 13.5 5.33 99 1 1 1 0 589.3194 1685.9739 Y193y TMT10 186 (R) HRPELIDyGK (L) HRPELIDY(1.0)GK K:TMT10,y:Phosphorylated Y ACTN1 107710.1 3 1 257.1 13.5 HUMAN 1 -25.3204 -21.9219 HRPELIEYDKLRKDD-p O43707;Y212-p HRPELIEYDKLRKDD 0.0482466396076474 0.0831931738744881 -0.581333333333333 -0.192333333333333 29.2252588752312 14.2948348868027 -0.581333333333333 -0.192333333333333 0.00119529227429954 0.0371977362995848 -6.19982649536363 -2.74552395872693 O43707 ACTN4 O43707.Y212.p_ACTN4 O43707_Y212y _1_1_212_212 O43707 O43707 Alpha-actinin-4 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11087.11087.3 9.36 9.36 99 1 1 1 0 613.326 1757.995 Y212y TMT10 205 (R) HRPELIEyDK (L) HRPELIEY(1.0)DK K:TMT10,y:Phosphorylated Y ACTN4 105308.6 2 1 361.1 9.36 HUMAN 1 -29.2253 -14.2948 HRPSPPATPPPKTRH-p A9Z1X7;T401-p HRPSPPATPPPKTRH 0.515582527821283 0.0216909765836911 0.180333333333333 1.07966666666667 5.31327578734794 22.7478392784852 0.180333333333333 1.07966666666667 0.294220155898014 0.0053114863797261 1.16117020190889 4.49011087843169 A9Z1X7 NotFound A9Z1X7.T401.p_NotFound A9Z1X7_T401t _1_1_401_401 A9Z1X7 A9Z1X7|Q8IYB3|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5057.5057.3 10.3 10.3 1.579 2 1 1 0 607.3383 1740.0321 T401t TMT10 394 (R) HRPSPPAtPPPK (T) HRPS(0.0)PPAT(0.99)PPPK K:TMT10,t:Phosphorylated T SRRM1 103445.7 3 10 8.1 1346.57 HUMAN 1 5.3133 22.7478 HRPSVFQSPDEDEEE-p Q8IWZ8;S163-p HRPSVFQSPDEDEEE 0.265747257066887 0.408086263340467 -0.19 -0.115 10.910594066206 5.18248190817273 -0.19 -0.115 0.0810850135051362 0.303215786994078 -2.14045340674499 -1.13715912278347 Q8IWZ8 SUGP1 Q8IWZ8.S163.p_SUGP1 Q8IWZ8_S163s _1_1_163_163 Q8IWZ8 Q8IWZ8|Q8IWZ8-2|B4DVK3 SURP and G-patch domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26948.26948.4 20.38 17.54 3.228 3 1 1 0 1013.7402 3971.9703 S163s TMT10 151 (K) QLPVAHRPSVFQsPDEDEEEDYEQWLEIK (V) QLPVAHRPS(0.0)VFQS(0.99)PDEDEEEDY(0.0)EQWLEIK K:TMT10,s:Phosphorylated S SUGP1 72583.7 1 1 1701.1 120.31 HUMAN 1 -10.9106 -5.1825 HRPVARVSPHCKRSE-p O15018;S1125-p HRPVARVSPHCKRSE 0.118229246118795 0.0546842867642028 0.450333333333333 -0.315666666666667 19.3021257597414 16.8235480256024 0.450333333333333 -0.315666666666667 0.0117432261353846 0.0207799834551557 3.73075387571762 -3.22553539310614 O15018 PDZD2 O15018.S1125.p_PDZD2 O15018_S1125s _1_1_1125_1125 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3404.3404.4 10.94 10.94 99 1 1 1 0 496.2731 1902.1009 S1125s TMT10 1118 (R) HRPVARVsPHCK (R) HRPVARVS(1.0)PHCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PDZD2 304146 2 17 85.1 628.64 HUMAN 1 19.3021 -16.8235 HRQYQHGSVSDTVFD-p Q99959;S225-p HRQYQHGSVSDTVFD 0.236669622621405 0.223033871305293 0.195 0.139333333333333 11.9911236897349 8.58317632076003 0.195 0.139333333333333 0.0632248242855119 0.138574196129327 2.33076026991984 1.73561506881997 Q99959 PKP2 Q99959.S225.p_PKP2 Q99959_S225s _1_1_225_225 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25345.25345.4 24.57 24.57 1.625 9 1 1 0 921.7082 3603.8393 S225s TMT10 220 (R) QYQHGsVSDTVFDSIPANPALLTYPRPGTSR (S) QY(0.0)QHGS(0.99)VS(0.0)DT(0.0)VFDS(0.0)IPANPALLT(0.0)Y(0.0)PRPGT(0.0)S(0.0)R s:Phosphorylated S PKP2 97926.6 4 12 257.1 399.17 HUMAN 1 11.9911 8.5832 HRRFTGDSGIEVCVC-p Q9NX94-2;S271-p HRRFTGDSGIEVCVC 0.558906099125035 0.798637774052327 0.091 -0.0273333333333333 4.66265646923995 1.36575560909581 0.091 -0.0273333333333333 0.34177032632092 0.73017076275149 1.04185884939989 -0.363227275162248 Q9NX94 WBP1L Q9NX94.2.S271.p_WBP1L Q9NX94-2_S271s _1_1_271_271 Q9NX94-2 Q9NX94-2 Isoform 2 of WW domain binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18688.18688.2 14.11 14.11 1.333 2 1 1 0 961.9202 1842.8676 S271s TMT10 267 (R) FTGDsGIEVCVCNR (G) FT(0.0)GDS(0.99)GIEVCVCNR C:Carbamidomethylation,s:Phosphorylated S WBP1L 41065.9 2 4 2953.1 64.8 HUMAN 1 4.6627 -1.3658 HRRKRSRSIEDDEEG-p Q9HAZ1;S138-p HRRKRSRSIEDDEEG 0.272925101260209 0.997091778325344 0.341333333333333 0.000666666666666686 10.6803200441306 0.0177122524947237 0.341333333333333 0.000666666666666691 0.085500370287396 0.995929908509991 2.10019380793385 0.00534049586425142 Q9HAZ1 CLK4 Q9HAZ1.S138.p_CLK4 Q9HAZ1_S138s _1_1_138_138 Q9HAZ1 Q9HAZ1|B7ZL31|A0A087WX74 Dual specificity protein kinase CLK4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18571.18571.3 18.24 18.24 14.072 2 1 1 0 827.712 2401.1503 S138s TMT10 138 (R) sIEDDEEGHLICQSGDVLR (A) S(0.99)IEDDEEGHLICQS(0.0)GDVLR C:Carbamidomethylation,s:Phosphorylated S CLK4 58346.7 1 1 3549.1 48.46 HUMAN 1 10.6803 0.0177 HRRKRTRSVEDDEEG-p P49759-3;S182-p HRRKRTRSVEDDEEG 0.497489803830562 0.621323322524952 0.0993333333333333 0.0886666666666667 5.58459407446519 2.81057383901025 0.0993333333333333 0.0886666666666667 0.276401625363917 0.523531257141975 1.21019153547234 0.681575648831763 P49759 CLK1 P49759.3.S182.p_CLK1 P49759-3_S182s _1_1_182_182 P49759-3 P49759-3|F8WBF5 Isoform 3 of Dual specificity protein kinase CLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17930.17930.3 20.77 20.77 20.769 3 1 1 0 875.7273 2545.2038 S182s TMT10 182 (R) sVEDDEEGHLICQSGDVLSAR (Y) S(0.99)VEDDEEGHLICQS(0.0)GDVLS(0.0)AR C:Carbamidomethylation,s:Phosphorylated S CLK1 62554.3 1 2 3131.1 59.93 HUMAN 1 5.5846 2.8106 HRRSPSVSSPEPAEK-p Q9UQ35;S1731-p HRRSPSVSSPEPAEK 0.588586350860677 0.00949153116870816 0.094 1.168 4.24022111052115 28.5432953261761 0.094 1.168 0.376684620510204 0.00139852575085155 0.962778503973867 5.99197766566476 Q9UQ35 SRRM2 Q9UQ35.S1731.p_SRRM2 Q9UQ35_S1731sS1732s_2_2_1731_1732 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8676.8676.3 8.91 8.91 2.555 4 2 2 0 663.6547 1829.0169 S1731s S1732s TMT10 1726 (R) RSPSVssPEPAEK (S) RS(0.0)PS(0.0)VS(0.99)S(0.99)PEPAEK K:TMT10,s:Phosphorylated S SRRM2 300351.7 4 224 2.1 3310.34 HUMAN 1 4.2402 28.5433 HRRSTVDSAEDVHSL-p Q8IV36;S170-p HRRSTVDSAEDVHSL 0.574983174915437 0.272510600486608 0.140666666666667 0.118666666666667 4.41927802562941 7.4365482095996 0.140666666666667 0.118666666666667 0.361469948677697 0.180445135642033 0.996473431567365 1.53678134018623 Q8IV36 HID1 Q8IV36.S170.p_HID1 Q8IV36_S170s _1_1_170_170 Q8IV36 Q8IV36|Q8IV36-2 Protein HID1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24561.24561.5 23.3 23.3 1.218 8 1 1 0 949.4208 4663.1092 S170s TMT10 166 (R) STVDsAEDVHSLDSCEYIWEAGVGFAHSPQPNYIHDMNR (M) S(0.0)T(0.0)VDS(0.99)AEDVHS(0.0)LDS(0.0)CEY(0.0)IWEAGVGFAHS(0.0)PQPNY(0.0)IHDMNR C:Carbamidomethylation,s:Phosphorylated S HID1 89370.5 1 1 589.1 264.44 HUMAN 1 4.4193 7.4365 HRRTLFASPLAKSTA-p Q96HA1;S108-p HRRTLFASPLAKSTA 0.568417101345875 0.00257268267088998 -0.0826666666666667 -0.831666666666667 4.51597893621197 39.5373392866195 -0.0826666666666667 -0.831666666666667 0.353510327924089 0.00011124130405155 -1.0145611774346 -9.92519499938629 Q96HA1 POM121 Q96HA1.S108.p_POM121 Q96HA1_S108s _1_1_108_108 Q96HA1 Q96HA1 Nuclear envelope pore membrane protein POM 121 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23776.23776.2 13.06 13.06 6.066 2 1 1 0 743.4276 1405.8819 S108s TMT10 104 (R) TLFAsPLAK (S) T(0.0)LFAS(0.99)PLAK K:TMT10,s:Phosphorylated S POM121 128174.4 4 40 133.1 532.02 HUMAN 1 -4.516 -39.5373 HRRTLFASPPAKSTA-p A8CG34;S95-p HRRTLFASPPAKSTA 0.776091926268754 0.00455583875149536 0.0583333333333333 -0.636666666666667 2.11072969862025 34.3035466560715 0.0583333333333333 -0.636666666666667 0.615073519795052 0.000371231939549208 0.533186645135198 -7.84131195485625 A8CG34 NotFound A8CG34.S95.p_NotFound A8CG34_S95s _1_1_95_95 A8CG34 A8CG34|A0A075B7F8 Nuclear envelope pore membrane protein POM 121C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19908.19908.2 11.59 11.59 5.954 2 1 1 0 735.4114 1389.8506 S95s TMT10 91 (R) TLFAsPPAK (S) T(0.0)LFAS(0.99)PPAK K:TMT10,s:Phosphorylated S POM121C 125455.9 3 3 133.2 532.02 HUMAN 1 2.1107 -34.3035 HRRTMIISPERLDPF-p O75533;S129-p HRRTMIISPERLDPF 0.553432266934303 0.0882457681284552 -0.105 0.184 4.74314524620451 13.9549434702051 -0.105 0.184 0.335494554472834 0.040225889195392 -1.05677074505016 2.68304653016903 O75533 SF3B1 O75533.S129.p_SF3B1 O75533_S129s _1_1_129_129 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28796.29007.3 19.87 13.54 4.335 2 1 1 0 795.7475 2305.2626 S129s TMT10 125 (R) TMIIsPERLDPFADGGK (T) T(0.0)MIIS(0.99)PERLDPFADGGK K:TMT10,s:Phosphorylated S SF3B1 146569.5 26 4 53.1 735.77 HUMAN 1 -4.7431 13.9549 HRSCLVNSGKDRLPQ-p Q13615;S871-p HRSCLVNSGKDRLPQ 0.151118695717772 0.0010212605030329 0.751666666666667 1.442 16.5406625905553 51.5220684372339 0.751666666666667 1.442 0.0221785802179004 7.04357520995541e-06 3.17270388228744 16.7592950557243 Q13615 MTMR3 Q13615.S871.p_MTMR3 Q13615_S871s _1_1_871_871 Q13615 Q13615|Q13615-2 Myotubularin-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10092.10092.2 10.8 10.8 10.795 2 1 1 0 701.8619 1322.7502 S871s TMT10 866 (R) SCLVNsGK (D) S(0.0)CLVNS(0.99)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTMR3 136241 1 9 913.1 201.43 HUMAN 1 16.5407 51.5221 HRSSISGSLPSSGSL-p A0A1B0GTL5;S361-p HRSSISGSLPSSGSL 0.906237367139803 0.842016903820397 0.0243333333333333 0.0253333333333334 0.840549230428075 1.04953651598409 0.0243333333333333 0.0253333333333333 0.824033896993178 0.785319440322898 0.233389326886208 0.286230012116829 A0A1B0GTL5 NotFound A0A1B0GTL5.S361.p_NotFound A0A1B0GTL5_S361s _1_1_361_361 A0A1B0GTL5 A0A1B0GTL5|Q9BXF6 Rab11 family-interacting protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16790.16790.3 16.18 15.01 2.444 9 1 1 0 706.0188 2036.0821 S361s TMT10 356 (R) SSISGsLPSSGSLQAVSSR (F) S(0.0)S(0.0)IS(0.0)GS(0.99)LPS(0.0)S(0.0)GS(0.0)LQAVS(0.0)S(0.0)R s:Phosphorylated S RAB11FIP5 139038.8 1 9 714.1 238.09 HUMAN 1 0.8405 1.0495 HRSSSTRSGGGDLTL-p P04626;S1054-p HRSSSTRSGGGDLTL 0.14828689978775 0.00666803892125879 0.286666666666667 0.669333333333333 16.7413985060246 31.2601768341765 0.286666666666667 0.669333333333334 0.0211767909483837 0.000748139037484444 3.21187308502607 6.81348698870145 P04626 ERBB2 P04626.S1054.p_ERBB2 P04626_S1054s _1_1_1054_1054 P04626 P04626|P04626-4|P04626-5|B4DTR1|P04626-2|P04626-3 Receptor tyrosine-protein kinase erbB-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29403.29403.5 24.74 21.48 2.517 6 1 1 0 937.2503 4602.2558 S1054s TMT10 1054 (R) sGGGDLTLGLEPSEEEAPRSPLAPSEGAGSDVFDGDLGMGAAK (G) S(0.99)GGGDLT(0.0)LGLEPS(0.0)EEEAPRS(0.0)PLAPS(0.0)EGAGS(0.0)DVFDGDLGMGAAK K:TMT10,s:Phosphorylated S ERBB2 141274.2 8 17 521.1 283.33 HUMAN 1 16.7414 31.2602 HRTLQRLSSGFDDID-p Q9Y446-2;S328-p HRTLQRLSSGFDDID 0.169413801333057 0.0285536998641696 -0.229333333333333 -0.352333333333333 15.3815816744376 20.9190753313877 -0.229333333333333 -0.352333333333333 0.0289628858468052 0.00809268184405117 -2.95032822997194 -4.07499045738072 Q9Y446 PKP3 Q9Y446.2.S328.p_PKP3 Q9Y446-2_S328sS329s_2_2_328_329 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28589.28589.3 10.25 10.25 2.256 4 2 2 0 894.1181 2520.4074 S328s S329s TMT10 323 (R) TLQRLssGFDDIDLPSAVK (Y) T(0.0)LQRLS(0.99)S(0.99)GFDDIDLPS(0.0)AVK K:TMT10,s:Phosphorylated S PKP3 89109.7 2 19 454.1 307.47 HUMAN 1 -15.3816 -20.9191 HRVGTHQSL______-p Q7KYR7;S526-p HRVGTHQSL______ 0.947544494630793 0.0976011303074174 -0.013 0.178 0.464650342791963 13.3613196031625 -0.013 0.178 0.898534932096419 0.0461177424574646 -0.133616018846551 2.57492323834212 Q7KYR7 BTN2A1 Q7KYR7.S526.p_BTN2A1 Q7KYR7_S526s _1_1_526_526 Q7KYR7 Q7KYR7|Q8WVV5|Q7KYR7-5 Butyrophilin subfamily 2 member A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7944.7944.2 7.39 7.39 7.39 2 1 1 0 525.7627 970.5519 S526s TMT10 521 (R) VGTHQsL (-) VGT(0.0)HQS(0.99)L s:Phosphorylated S BTN2A1 60430.2 2 1 7173.1 7.39 HUMAN 1 -0.4647 13.3613 HSARSLHSAHSLASR-p J3KNL6;S1359-p HSARSLHSAHSLASR 0.49148019051802 0.498476233602549 -0.162666666666667 0.128 5.67953899435677 4.04543406832327 -0.162666666666667 0.128 0.270424540580051 0.39396404978759 -1.22725866589713 0.925646364790289 J3KNL6 SEC16A J3KNL6.S1359.p_SEC16A J3KNL6_S1359s _1_1_1359_1359 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4305.4305.3 14.56 14.56 2.64 4 1 1 0 492.2504 1394.7702 S1359s TMT10 1356 (R) SLHsAHSLASR (R) S(0.0)LHS(0.99)AHS(0.0)LAS(0.0)R s:Phosphorylated S SEC16A 253486.5 1 30 15.1 1143.82 HUMAN 1 -5.6795 4.0454 HSAVLALSPSQSPRL-p O14686-3;S3623-p HSAVLALSPSQSPRL 0.974387172364495 0.0197263100945659 -0.00499999999999999 0.366666666666667 0.22008120333134 23.3979603868826 -0.00499999999999999 0.366666666666667 0.95058701964404 0.00457302906139813 -0.0648957991039768 4.6438223074921 O14686 KMT2D O14686.3.S3623.p_KMT2D O14686-3_S3623s _1_1_3623_3623 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10000.10000.3 26.21 26.21 2 4 1 1 0 1184.5789 3471.7639 S3623s TMT10 3602 (K) QQQQQQQQQQQQQQHSAVLALsPSQSPR (L) QQQQQQQQQQQQQQHS(0.0)AVLALS(0.99)PS(0.0)QS(0.0)PR s:Phosphorylated S KMT2D 600227.3 5 36 17.1 1042.08 HUMAN 1 -0.2201 23.398 HSDWSVGSEESKGYQ-p Q96PE2;S790-p HSDWSVGSEESKGYQ 0.395304354889455 0.00997849562030855 -0.136 0.577333333333333 7.435868277013 28.1136124093753 -0.136 0.577333333333333 0.180473388391645 0.00154396964985256 -1.53711435885023 5.86955223839564 Q96PE2 ARHGEF17 Q96PE2.S790.p_ARHGEF17 Q96PE2_S787sS790s_2_2_787_790 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23525.23525.3 17.28 17.28 1.443 9 2 2 0 1152.178 3294.5836 S787s S790s TMT10 767 (K) TGLPATSAMDEGLTSGHSDWsVGsEESK (G) T(0.0)GLPAT(0.0)S(0.0)AMDEGLT(0.0)S(0.0)GHS(0.0)DWS(0.99)VGS(0.99)EES(0.0)K K:TMT10,s:Phosphorylated S ARHGEF17 223779.6 3 46 30.1 908.19 HUMAN 1 -7.4359 28.1136 HSDYARYSGSYNDYL-p Q96PK6;S649-p HSDYARYSGSYNDYL 0.750030732986109 0.061546252177246 -0.0516666666666667 -0.252 2.37765130334961 16.1221338806768 -0.0516666666666667 -0.252 0.578408770573883 0.0244223028220084 -0.590901504053102 -3.08947282339937 Q96PK6 RBM14 Q96PK6.S649.p_RBM14 Q96PK6_S649s _1_1_649_649 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13415.13415.4 18.55 18.55 1.138 7 1 1 0 707.8297 2748.3328 S649s TMT10 637 (R) RLPDAHSDYARYsGSYNDYLR (A) RLPDAHS(0.0)DY(0.0)ARY(0.0)S(0.99)GS(0.0)Y(0.0)NDY(0.0)LR s:Phosphorylated S RBM14 69661.6 2 18 151.1 510.8 HUMAN 1 -2.3777 -16.1221 HSEAGGGSGDRRRAG-p O96013;S148-p HSEAGGGSGDRRRAG 0.617306864410826 0.182827138035111 -0.0783333333333334 -0.280666666666667 3.8891633347231 9.70740605589616 -0.0783333333333334 -0.280666666666667 0.408398056354037 0.106969359259046 -0.895882925499864 -1.93016376496833 O96013 PAK4 O96013.S148.p_PAK4 O96013_S148s _1_1_148_148 O96013 O96013 Serine/threonine-protein kinase PAK 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3504.3504.3 15.13 11.31 5.275 2 1 1 0 590.603 1689.8255 S148s TMT10 138 (R) FAGHSEAGGGsGDRR (R) FAGHS(0.0)EAGGGS(0.99)GDRR s:Phosphorylated S PAK4 64356.2 3 3 573.1 269.06 HUMAN 1 -3.8892 -9.7074 HSEEAEFTPPLKCSP-p Q3B726;T322-p HSEEAEFTPPLKCSP 0.844688470927002 0.283944374109889 0.0313333333333333 -0.159 1.41619791059203 7.20960833347846 0.0313333333333333 -0.159 0.721739058838842 0.190124973554254 0.375248374245748 -1.49723032096564 Q3B726 TWISTNB Q3B726.T322.p_TWISTNB Q3B726_T322t _1_1_322_322 Q3B726 Q3B726 DNA-directed RNA polymerase I subunit RPA43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14257.14257.5 19.35 17.97 1.243 3 1 1 0 525.6746 2544.3735 T322t TMT10 315 (K) HSEEAEFtPPLKCSPK (R) HS(0.0)EEAEFT(0.99)PPLKCS(0.0)PK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T TWISTNB 37945.1 7 8 540.1 277.01 HUMAN 1 1.4162 -7.2096 HSEEFTNSLKTKSQY-p Q9H788;S124-p HSEEFTNSLKTKSQY 0.385746647604791 0.116542468917028 -0.121333333333333 -0.217666666666667 7.65835181247583 12.3135844987841 -0.121333333333333 -0.217666666666667 0.171460789352296 0.0587004661576758 -1.5758314528864 -2.386854687042 Q9H788 SH2D4A Q9H788.S124.p_SH2D4A Q9H788_S124s _1_1_124_124 Q9H788 Q9H788|Q9H788-2 SH2 domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7431.7431.3 12.4 12.4 1.262 4 1 1 0 653.6728 1879.0325 S124s Hydrogen 115 (R) KTHSEEFTNsLK (T) KT(0.0)HS(0.0)EEFT(0.0)NS(0.99)LK K:TMT10-Lys-Only,s:Phosphorylated S SH2D4A 52954.2 3 1 3619.1 46.82 HUMAN 1 -7.6584 -12.3136 HSEEVTASQVAATKT-p Q15149;S2755-p HSEEVTASQVAATKT 0.36242915999841 0.824592915138537 0.133333333333333 0.0306666666666667 8.19011974691422 1.17400372476319 0.133333333333333 0.0306666666666667 0.151700853879161 0.763131934198294 1.66812614957949 0.316941405153406 Q15149 PLEC Q15149.S2755.p_PLEC Q15149_S2755s _1_1_2755_2755 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14533.14533.3 21.05 21.05 1.123 4 1 1 0 774.7432 2242.2443 S2755s TMT10 2744 (R) AALAHSEEVTAsQVAATK (T) AALAHS(0.0)EEVT(0.0)AS(0.99)QVAAT(0.0)K K:TMT10,s:Phosphorylated S PLEC 533778 2 20 44.1 794.85 HUMAN 1 8.1901 1.174 HSEGGKRSPEPNKTS-p Q9Y618;S2214-p HSEGGKRSPEPNKTS 0.25414491835742 0.102369107470149 -0.478333333333333 -0.194 11.3275005338479 13.0723342166226 -0.478333333333334 -0.194 0.0736630923819224 0.0492908807453337 -2.21358726760269 -2.52271603260272 Q9Y618 NCOR2 Q9Y618.S2214.p_NCOR2 Q9Y618_S2214s _1_1_2214_2214 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7|Q9Y618-2 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3532.3532.4 13.23 11.05 4.448 3 1 1 0 608.572 2351.3035 S2214s TMT10 2204 (R) GSPHSEGGKRsPEPNK (T) GS(0.0)PHS(0.0)EGGKRS(0.99)PEPNK K:TMT10,s:Phosphorylated S NCOR2 275540.8 2 34 16.1 1053.89 HUMAN 1 -11.3275 -13.0723 HSEHSARSLHSAHSL-p J3KNL6;S1356-p HSEHSARSLHSAHSL 0.330339479632074 0.0496989323135193 -0.154666666666667 0.272 8.98861641131184 17.4349854688873 -0.154666666666667 0.272 0.126222959552046 0.0180510077683046 -1.80639223397423 3.346174394828 J3KNL6 SEC16A J3KNL6.S1356.p_SEC16A J3KNL6_S1356s _1_1_1356_1356 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.4495.4495.3 15.97 15.97 1.3 4 1 1 0 492.2501 1394.7702 S1356s TMT10 1356 (R) sLHSAHSLASR (R) S(0.99)LHS(0.0)AHS(0.0)LAS(0.0)R s:Phosphorylated S SEC16A 253486.5 3 29 15.1 1143.82 HUMAN 1 -8.9886 17.435 HSEQRAGSPGEEQAH-p F6WH68;S847-p HSEQRAGSPGEEQAH 0.343568239873255 0.488201724755384 0.142333333333333 0.127333333333333 8.61708771403404 4.16042396264729 0.142333333333333 0.127333333333333 0.137496368719676 0.383669789432797 1.74207903483784 0.947507987039037 F6WH68 NotFound F6WH68.S847.p_NotFound F6WH68_S847s _1_1_847_847 F6WH68 Q9NZ71-2|F6WH68|Q9NZ71-6|Q9NZ71-7|Q9NZ71-4|Q9NZ71-8 Regulator of telomere elongation helicase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18571.18571.3 11.76 11.76 3.636 6 1 1 0 909.4418 2646.3445 S847s TMT10 845 (R) AGsPGEEQAHSCSTLSLLSEK (R) AGS(0.99)PGEEQAHS(0.0)CS(0.0)T(0.0)LS(0.0)LLS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RTEL1-TNFRSF6B 154577.6 1 2 4142.1 36.79 HUMAN 1 8.6171 4.1604 HSGALDGSPNTPFRK-p Q9UN79;S371-p HSGALDGSPNTPFRK 0.628865057229206 0.0421918828246993 -0.0986666666666667 0.308666666666667 3.74355829825849 18.4153407953636 -0.0986666666666667 0.308666666666667 0.422322451673692 0.0144034298061096 -0.867781774243557 3.54382940839286 Q9UN79 SOX13 Q9UN79.S371.p_SOX13 Q9UN79_S371s _1_1_371_371 Q9UN79 Q9UN79 Transcription factor SOX-13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12945.12945.4 11.77 11.77 1.122 4 1 1 0 675.8568 2620.436 S371s TMT10 359 (R) QLLHSHSGALDGsPNTPFRK (D) QLLHS(0.0)HS(0.0)GALDGS(0.99)PNT(0.0)PFRK K:TMT10,s:Phosphorylated S SOX13 69740.6 1 8 1036.1 185.73 HUMAN 1 -3.7436 18.4153 HSGPGKGSPQAGVDL-p Q13884;S389-p HSGPGKGSPQAGVDL 0.41661337747316 0.889469027764128 0.121333333333333 0.015 7.01909984848083 0.713144675319229 0.121333333333333 0.015 0.1986506613043 0.848565815991713 1.4643561272829 0.200271464000553 Q13884 SNTB1 Q13884.S389.p_SNTB1 Q13884_S389s _1_1_389_389 Q13884 Q13884 Beta-1-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17291.17291.4 17.67 17.67 2.475 4 1 1 0 680.6147 2639.467 S389s TMT10 380 (R) LVHSGPGKGsPQAGVDLSFATR (T) LVHS(0.0)GPGKGS(0.99)PQAGVDLS(0.0)FAT(0.0)R K:TMT10,s:Phosphorylated S SNTB1 58402.4 2 3 2874.1 67.59 HUMAN 1 7.0191 0.7131 HSGQEAASPGPAPSL-p Q5JTD0;S214-p HSGQEAASPGPAPSL 0.461887246924673 0.0902560883229834 -0.141 -0.276 6.18718996911784 13.8185761113052 -0.141 -0.276 0.240591900674229 0.0415090112804232 -1.3178421947847 -2.658099260217 Q5JTD0 TJAP1 Q5JTD0.S214.p_TJAP1 Q5JTD0_S214s _1_1_214_214 Q5JTD0 Q5JTD0|Q5JTD0-2|Q5JTD0-4 Tight junction-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18673.18673.4 15.32 15.32 2.19 5 1 1 0 796.6669 3103.685 S214s TMT10 205 (K) HLHSGQEAAsPGPAPSLAPGAVVPTSVIAR (V) HLHS(0.0)GQEAAS(0.99)PGPAPS(0.0)LAPGAVVPT(0.0)S(0.0)VIAR s:Phosphorylated S TJAP1 62162.4 1 2 1364.1 149.81 HUMAN 1 -6.1872 -13.8186 HSGSGCRSPSLGSDL-p Q13425;S393-p HSGSGCRSPSLGSDL 0.598708308112007 0.0379737699613726 0.0723333333333333 -0.323333333333333 4.11704615105699 19.0771213866683 0.0723333333333333 -0.323333333333333 0.387521127358616 0.0123676692212619 0.939437981528432 -3.68038721820417 Q13425 SNTB2 Q13425.S393.p_SNTB2 Q13425_S393s _1_1_393_393 Q13425 Q13425 Beta-2-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16597.16597.3 11.58 7.11 1.144 7 1 1 0 872.0941 2534.2983 S393s TMT10 384 (R) LVHSGSGCRsPSLGSDLTFATR (T) LVHS(0.0)GS(0.0)GCRS(0.99)PS(0.0)LGS(0.0)DLT(0.0)FAT(0.0)R C:Carbamidomethylation,s:Phosphorylated S SNTB2 58405 2 10 637.1 255.93 HUMAN 1 4.117 -19.0771 HSGTWKLSPPRLMAN-p Q9Y6X0;S830-p HSGTWKLSPPRLMAN 0.522932385009279 0.29012319433751 0.0866666666666667 -0.121333333333333 5.20690858519815 7.09201571888127 0.0866666666666667 -0.125122154142878 0.301515151940282 0.195343258611951 1.14184355288751 -1.47669729263117 Q9Y6X0 SETBP1 Q9Y6X0.S830.p_SETBP1 Q9Y6X0_S830s _1_1_830_830 Q9Y6X0 Q9Y6X0 SET-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14046.14046.3 9.33 9.33 2.571 3 1 1 0 658.697 1894.1063 S830s TMT10 821 (K) GIHSGTWKLsPPR (L) GIHS(0.0)GT(0.0)WKLS(0.99)PPR K:TMT10,s:Phosphorylated S SETBP1 175746.2 3 4 1489.1 137.6 HUMAN 1 5.2069 -7.092 HSHQRVHTGEKPYKC-p Q9NZL3;T507-p HSHQRVHTGEKPYKC 0.338303322331957 0.00159168462790637 -0.191 -1.17033333333333 8.75755630609809 44.797297096195 -0.191 -1.17033333333333 0.133120325047687 3.31337270576629e-05 -1.76639560155981 -12.5148638209781 Q9NZL3 ZNF224 Q9NZL3.T507.p_ZNF224 Q9NZL3_T507t _1_1_507_507 Q9NZL3 P17040|P17040-3|P59923|Q9UJW7|Q9UJW7-2|Q9UJU3|Q9UJU3-2|Q8NHY6|B7Z6K7|Q9Y2L8|A0A087WVZ7|Q9HCG1|Q6ZN19|Q9NYT6|Q86WZ6|M0QZI7|Q08AN1|Q86WZ6-2|Q14586|Q14590|Q14590-2|P17035|A0A1W2PQ69|Q9NZL3|P52740|Q9UK10|Q14588|Q8N8Z8|P17020|Q02386|Q9H7R5-2|Q76KX8|A6NK53|Q08AG5|P17035-2|Q86YE8|Q76KX8-2|Q0VGE8|Q8N8Z8-2|P35789|Q86YE8-3|Q9UL59|Q09FC8|K7ENM7|K7EIK6|P35789-2|Q96NJ3|P52740-2|P0C7X5|Q9P2F9|Q86YE8-4|Q86YE8-2|A0A087WWD1|Q3KP31|Q14593|Q09FC8-6|P17022|P17022-2|Q3KP31-2|Q09FC8-2|Q09FC8-5|Q09FC8-4|Q8N8E2|P35789-3|Q9NV72|Q7L2R6|Q5VIY5|Q14593-2|P0CJ79|Q9UK12-2|Q9UK11|Q8N8E2-2|Q5VIY5-2|Q9NV72-2|Q96NJ3-2|B4DX44|Q6U7Q0|A0A1W2PPT3|P17028|A0A1W2PNY2|Q6AZW8|Q09FC8-3|Q8N3J9|Q8N8E2-3 Zinc finger protein 224 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7246.7246.4 12.44 12.44 9.538 2 1 1 0 457.2604 1746.0517 T507t TMT10 505 (R) VHtGEKPYK (C) VHT(0.99)GEKPY(0.0)K K:TMT10,t:Phosphorylated T ZNF224 84960.2 2 13 2223.3 92.84 HUMAN 1 -8.7576 -44.7973 HSHSIQHSPERSGSG-p Q9NYF8;S268-p HSHSIQHSPERSGSG 0.202041682996529 0.0163762306271687 0.354333333333333 0.371 13.4878472165639 24.6651068920797 0.354333333333333 0.371 0.0447935289200028 0.003415775433991 2.59935721835557 4.95338087628035 Q9NYF8 BCLAF1 Q9NYF8.S268.p_BCLAF1 Q9NYF8_S268s _1_1_268_268 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|Q9NYF8-4|A0A1W2PQ43|E9PJA7 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.2932.2932.3 24.16 24.16 2.346 5 1 1 0 717.668 2071.0267 S268s TMT10 256 (K) NTPSQHSHSIQHsPER (S) NT(0.0)PS(0.0)QHS(0.0)HS(0.0)IQHS(0.99)PER s:Phosphorylated S BCLAF1 106234.3 12 9 10.1 1293.04 HUMAN 1 13.4878 24.6651 HSKHRSASPEHPQKP-p Q96PX6;S255-p HSKHRSASPEHPQKP 0.28377835512685 0.0167801058367106 -0.154666666666667 0.514 10.3222237259364 24.5036228383988 -0.154666666666667 0.514 0.092849084818676 0.00354517531094261 -2.03775157130694 4.91317416706752 Q96PX6 CCDC85A Q96PX6.S255.p_CCDC85A Q96PX6_S255s _1_1_255_255 Q96PX6 Q96PX6 Coiled-coil domain-containing protein 85A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3746.3746.3 11.21 11.21 2.151 2 1 1 0 591.313 1691.9593 S255s TMT10 253 (R) SAsPEHPQKPR (A) S(0.0)AS(0.99)PEHPQKPR K:TMT10,s:Phosphorylated S CCDC85A 60659.2 2 1 1994.1 103.61 HUMAN 1 -10.3222 24.5036 HSKHSENSLLLTKTE-p Q8WXW3;S703-p HSKHSENSLLLTKTE 0.438965780358395 0.0512773734855381 -0.148333333333333 -0.354333333333333 6.58418652099905 17.2200587970595 -0.148333333333333 -0.354333333333333 0.219574219610863 0.0189668024278772 -1.38801237079206 -3.30354559493932 Q8WXW3 PIBF1 Q8WXW3.S703.p_PIBF1 Q8WXW3_S703s _1_1_703_703 Q8WXW3 Q8WXW3|Q8WXW3-4|Q8WXW3-2 Progesterone-induced-blocking factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13843.13843.3 13.4 13.02 4.142 3 1 1 0 560.6446 1599.947 S703s TMT10 699 (K) HSENsLLLTK (T) HS(0.0)ENS(0.99)LLLT(0.0)K K:TMT10,s:Phosphorylated S PIBF1 90088.3 1 2 5166.1 22.26 HUMAN 1 -6.5842 -17.2201 HSKRSHDSDDSDYAS-p Q9UKJ3;S911-p HSKRSHDSDDSDYAS 0.885820345057877 0.0970280843037502 0.0263333333333333 0.231166666666667 1.03618319119933 13.396083306797 0.0263333333333333 0.231166666666667 0.787737791055205 0.04575006014239 0.28293013470709 2.58122187883301 Q9UKJ3 GPATCH8 Q9UKJ3.S911.p_GPATCH8 Q9UKJ3_S911sS914s_2_2_911_914 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4669.4669.2 12.74 12.74 2.903 6 2 2 0 901.8214 1642.703 S911s S914s Hydrogen 908 (R) SHDsDDsDYASSK (H) S(0.0)HDS(0.99)DDS(0.99)DY(0.0)AS(0.0)S(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S GPATCH8 165107.3 6 17 231.1 422.52 HUMAN 2 1.0362 13.3961 HSKSPRRTRSRSPLG-p Q8IXT5;T276-p HSKSPRRTRSRSPLG 0.971185861810661 0.21426597029771 -0.0156666666666667 0.617666666666667 0.248683484322686 8.80460811826211 -0.0156666666666667 0.617666666666667 0.944347101277511 0.131685873292962 -0.0731072390198414 1.77391722847249 Q8IXT5 RBM12B Q8IXT5.T276.p_RBM12B Q8IXT5_T276tS278sS280s_3_3_276_280 Q8IXT5 Q8IXT5|B9ZVT1 RNA-binding protein 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18326.18326.4 9.76 2.21 1.763 4 3 3 0 629.5693 2275.3552 T276t S278s S280s TMT10 275 (R) RtRsRsPLGFYVHLK (N) RT(0.99)RS(0.99)RS(0.99)PLGFY(0.0)VHLK K:TMT10,t:Phosphorylated T,s:Phosphorylated S RBM12B 118442.9 2 19 384.1 333.8 HUMAN 1 -0.2487 8.8046 HSLCNGDSPGPVQKN-p Q674X7-3;S346-p HSLCNGDSPGPVQKN 0.36202743547635 0.550604485863581 -0.123333333333333 -0.0656666666666667 8.19661129693406 3.4890472005125 -0.123333333333333 -0.0656666666666667 0.151474270742392 0.447811538858544 -1.66925125033699 -0.817981264491709 Q674X7 KAZN Q674X7.3.S346.p_KAZN Q674X7-3_S346s_1_1_346_346 Q674X7-3 A0A1B0GWK2|Q674X7|Q674X7-2|Q674X7-3|Q674X7-4 Isoform 3 of Kazrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8859.8859.3 10.27 10.27 10.265 3 1 1 0 712.6729 2055.0693 N343n S346s TMT10 338 (R) THSLCnGDsPGPVQK (N) T(0.0)HS(0.0)LCN(1.0)GDS(0.99)PGPVQK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S KAZN 46553.4 1 3 3086.1 61.12 HUMAN 1 -8.1966 -3.489 HSLGLTVSPCRTRGS-p Q9H972;S285-p HSLGLTVSPCRTRGS 0.974612950944457 0.806200035724117 0.005 0.0256666666666667 0.217778516944783 1.3094338225501 0.00500000000000001 0.0256666666666667 0.951091167008548 0.739701701594307 0.0642325996912069 0.349755569917135 Q9H972 C14orf93 Q9H972.S285.p_C14orf93 Q9H972_S285s _1_1_285_285 Q9H972 Q9H972|Q9H972-2|A0A0C4DFZ6 Uncharacterized protein C14orf93 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11624.11624.2 12.79 12.79 1.14 3 1 1 0 768.3837 1455.7939 S285s TMT10 278 (R) HSLGLTVsPCR (T) HS(0.0)LGLT(0.0)VS(0.99)PCR C:Carbamidomethylation,s:Phosphorylated S C14orf93 59380.4 3 2 2148.1 95.78 HUMAN 1 0.2178 1.3094 HSLLPQHSPKKDNAV-p Q9BYN7;S532-p HSLLPQHSPKKDNAV 0.793573507282735 0.113663276778814 0.0406666666666667 -0.181333333333333 1.93781758695552 12.4546404825267 0.0406666666666667 -0.181333333333333 0.640056395292163 0.0568245430081937 0.49498683556444 -2.41198705794541 Q9BYN7 ZNF341 Q9BYN7.S532.p_ZNF341 Q9BYN7_S532s _1_1_532_532 Q9BYN7 Q9BYN7|Q9BYN7-2|E9PN62 Zinc finger protein 341 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22860.22860.5 16.5 16.5 2.848 6 1 1 0 732.9904 3580.952 S532s TMT10 511 (K) DFPSLYDLGVHQYSHSLLPQHsPKK (D) DFPS(0.0)LY(0.0)DLGVHQY(0.0)S(0.0)HS(0.0)LLPQHS(0.99)PKK K:TMT10,s:Phosphorylated S ZNF341 94552.3 1 1 5757.1 16.5 HUMAN 1 1.9378 -12.4546 HSMDRQNSQEKAVGA-p Q9UBI9;S250-p HSMDRQNSQEKAVGA 0.0350618685416583 0.276913584753414 0.602666666666667 0.177333333333333 33.9054070826774 7.34787484139159 0.602666666666667 0.177333333333333 0.000406873394049104 0.184167297762883 7.7141610039825 1.52133843798937 Q9UBI9 HECA Q9UBI9.S250.p_HECA Q9UBI9_S250s _1_1_250_250 Q9UBI9 Q9UBI9 Headcase protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3297.3297.3 11.71 11.71 4.504 2 1 1 0 633.3051 1817.9329 S250s TMT10 243 (R) HSMDRQNsQEK (A) HS(0.0)MDRQNS(0.99)QEK K:TMT10,s:Phosphorylated S HECA 60319 2 1 6436.1 11.71 HUMAN 1 33.9054 7.3479 HSPDGPRSAGWREHM-p I1E4Y6;S264-p HSPDGPRSAGWREHM 0.0508357082946631 0.00129606731851265 -1.025 -1.35 28.4339134249046 47.2325935660208 -1.025 -1.35 0.0014341964973278 1.89121386610982e-05 -5.9694319371275 -13.9170920465414 I1E4Y6 NotFound I1E4Y6.S264.p_NotFound I1E4Y6_S258sS264s_2_2_258_264 I1E4Y6 I1E4Y6|Q6Y7W6-3 GRB10-interacting GYF protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7320.7320.5 8.06 8.06 99 2 2 2 0 567.456 2673.3167 S258s S264s TMT10 254 (R) WRPHsPDGPRsAGWREHMER (R) WRPHS(1.0)PDGPRS(1.0)AGWREHMER s:Phosphorylated S GIGYF2 152981.7 1 2 470.2 302.35 HUMAN 1 -28.4339 -47.2326 HSPFRARSEPEDPVT-p Q9BT22;S248-p HSPFRARSEPEDPVT 0.51428507339171 0.237170290236434 -0.131666666666667 0.173666666666667 5.333121951298 8.23089586905686 -0.131666666666667 0.173666666666667 0.292878711258303 0.150283192772897 -1.16476918512627 1.67464586461987 Q9BT22 ALG1 Q9BT22.S248.p_ALG1 Q9BT22_S248s _1_1_248_248 Q9BT22 Q9BT22|Q9BT22-2 Chitobiosyldiphosphodolichol beta-mannosyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5704.5704.3 9.26 3.98 3.136 2 1 1 0 565.603 1614.8285 S248s TMT10 246 (R) ARsEPEDPVTER (S) ARS(0.99)EPEDPVT(0.0)ER s:Phosphorylated S ALG1 53315.9 1 1 6826.1 9.26 HUMAN 1 -5.3331 8.2309 HSPGRTASLNQRPRT-p Q8IZP0-9;S231-p HSPGRTASLNQRPRT 0.991625794245442 0.0286947506330818 -0.00333333333333334 0.324333333333333 0.0773742823334719 20.8838538479873 -0.00333333333333334 0.324333333333333 0.982341681241729 0.00815858072850368 -0.0231744788085235 4.06723268137841 Q8IZP0 ABI1 Q8IZP0.9.S231.p_ABI1 Q8IZP0-9_S231s _1_1_231_231 Q8IZP0-9 Q8IZP0|Q8IZP0-12|Q8IZP0-9|Q8IZP0-6|Q8IZP0-5|A0A0A0MRT6|Q8IZP0-3|Q8IZP0-4|Q8IZP0-2|Q8IZP0-7|Q8IZP0-8|B6VEX4|Q8IZP0-10|Q8IZP0-11 Isoform 9 of Abl interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4208.4208.3 8.56 8.56 2.001 2 1 1 0 451.2397 1271.7381 S231s TMT10 229 (R) TAsLNQRPR (T) T(0.0)AS(0.99)LNQRPR s:Phosphorylated S ABI1 52580.9 3 7 1517.1 134.48 HUMAN 1 -0.0774 20.8839 HSPRHHKSDPYSTGH-p O60885;S1051-p HSPRHHKSDPYSTGH 0.368479250934454 0.714494510479008 0.218333333333333 0.0496666666666667 8.0387485228348 2.00892872703365 0.218333333333333 0.0496666666666667 0.157081539041502 0.629661482121748 1.6418817971479 0.510719069954311 O60885 BRD4 O60885.S1051.p_BRD4 O60885_S1051s _1_1_1051_1051 O60885 O60885 Bromodomain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.3702.3702.5 12.69 12.69 1.292 4 1 1 0 415.413 1993.0768 S1051s TMT10 1048 (R) HHKsDPYSTGHLR (E) HHKS(0.99)DPY(0.0)S(0.0)T(0.0)GHLR K:TMT10,s:Phosphorylated S BRD4 152672.5 2 4 941.1 198.07 HUMAN 1 8.0387 2.0089 HSQNRFFTPPASKGN-p Q69YN4;T1708-p HSQNRFFTPPASKGN 0.470096373935582 0.0831931738744881 -0.155666666666667 -0.409333333333333 6.05312542473501 14.2948200452034 -0.155666666666667 -0.409333333333333 0.248134674740881 0.0371978634195139 -1.2940219242318 -2.74552122113214 Q69YN4 KIAA1429 Q69YN4.T1708.p_KIAA1429 Q69YN4_T1708t _1_1_1708_1708 Q69YN4 Q69YN4 Protein virilizer homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18718.18718.2 9.13 6.85 9.132 2 1 1 0 602.3034 1123.6349 T1708t Hydrogen 1706 (R) FFtPPASK (G) FFT(0.99)PPAS(0.0)K K:TMT10-Lys-Only,t:Phosphorylated T VIRMA 203675.9 1 9 1178.1 169.26 HUMAN 1 -6.0531 -14.2948 HSQRSSLSGDEEDEL-p Q5T1M5;S1164-p HSQRSSLSGDEEDEL 0.246490628895716 0.384281224018588 0.167333333333333 -0.137666666666667 11.638913825283 5.51982668685753 0.167333333333333 -0.137666666666667 0.0685659689164422 0.280554559613721 2.26844681745116 -1.19825984755819 Q5T1M5 FKBP15 Q5T1M5.S1164.p_FKBP15 Q5T1M5_S1164s _1_1_1164_1164 Q5T1M5 Q5T1M5|Q5T1M5-2 FK506-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23686.23686.4 22.02 22.02 2.225 4 1 1 0 674.1027 2613.4226 S1164s TMT10 1161 (R) SSLsGDEEDELFKGATLK (A) S(0.0)S(0.0)LS(0.99)GDEEDELFKGAT(0.0)LK K:TMT10,s:Phosphorylated S FKBP15 134140.9 7 20 173.1 487.64 HUMAN 1 11.6389 -5.5198 HSRDSSDSADGRATP-p Q8N684-3;S240-p HSRDSSDSADGRATP 0.90552186362789 0.122162779224341 0.0293333333333333 0.190333333333333 0.846475469049815 12.0431559029298 0.0293333333333333 0.190333333333333 0.822910214481256 0.0624718561366973 0.234912302139036 2.33881965451328 Q8N684 CPSF7 Q8N684.3.S240.p_CPSF7 Q8N684-3_S240s _1_1_240_240 Q8N684-3 Q8N684-3|Q8N684-2 Isoform 3 of Cleavage and polyadenylation specificity factor subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10294.10294.3 15.51 10.73 1.127 7 1 1 0 843.389 2448.18 S240s TMT10 236 (R) DSSDsADGRATPSENLVPSSAR (V) DS(0.0)S(0.0)DS(0.99)ADGRAT(0.0)PS(0.0)ENLVPS(0.0)S(0.0)AR s:Phosphorylated S CPSF7 56545.1 2 4 1653.1 123.34 HUMAN 1 0.8465 12.0432 HSRKMNVSPDVNYEE-p P17980;S376-p HSRKMNVSPDVNYEE 0.77418786638107 0.0673187849272973 -0.0623333333333333 0.278 2.12778711795324 15.5898687091532 -0.0623333333333333 0.278 0.612662485137949 0.0276066131205455 -0.536919055965401 2.98778661182578 P17980 PSMC3 P17980.S376.p_PSMC3 P17980_S376s _1_1_376_376 P17980 P17980|R4GNH3|E9PM69 26S proteasome regulatory subunit 6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21217.21217.3 14.83 14.83 6.231 2 1 1 0 649.3036 1865.9265 S376s TMT10 373 (K) MNVsPDVNYEELAR (C) MNVS(0.99)PDVNY(0.0)EELAR s:Phosphorylated S PSMC3 49488 3 5 2442.1 83.31 HUMAN 1 -2.1278 15.5899 HSRQWSGSQDSQMGF-p Q96HB5-4;S366-p HSRQWSGSQDSQMGF 0.237800187730078 0.319728484469566 0.201 0.149666666666667 11.9487516144539 6.54983780796413 0.201 0.149666666666667 0.0638446982291798 0.221317736159736 2.32324784663222 1.38160356546282 Q96HB5 CCDC120 Q96HB5.4.S366.p_CCDC120 Q96HB5-4_S366s _1_1_366_366 Q96HB5-4 Q96HB5-4|Q96HB5-3|Q96HB5-5|Q96HB5-2 Isoform 4 of Coiled-coil domain-containing protein 120 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17112.17112.3 14.73 14.73 2.582 3 1 1 0 640.6144 1839.8645 S366s TMT10 362 (R) QWSGsQDSQMGFPR (A) QWS(0.0)GS(0.99)QDS(0.0)QMGFPR s:Phosphorylated S CCDC120 75538.7 4 5 1058.1 182.62 HUMAN 1 11.9488 6.5498 HSSRRAKSVEDDAEG-p P49760;S142-p HSSRRAKSVEDDAEG 0.563857690184248 0.367707457128541 0.09 0.146333333333333 4.58332856727456 5.76284361628496 0.09 0.146333333333333 0.34807044082404 0.265286798317882 1.02711559514126 1.24191397722587 P49760 CLK2 P49760.S142.p_CLK2 P49760_S142s _1_1_142_142 P49760 P49760|P49760-3|B1AVT0 Dual specificity protein kinase CLK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24096.24096.4 24.77 24.77 8.672 2 1 1 0 695.0739 2697.3106 S142s TMT10 142 (K) sVEDDAEGHLIYHVGDWLQER (Y) S(0.99)VEDDAEGHLIY(0.0)HVGDWLQER s:Phosphorylated S CLK2 60545.5 7 5 1587.1 129.39 HUMAN 1 4.5833 5.7628 HSSSRDDYPSRGYSD-p P38159;Y255-p HSSSRDDYPSRGYSD 0.69528556416086 0.140486651915185 -0.160333333333333 -0.762333333333333 2.96284081842284 11.2321849171902 -0.160333333333333 -0.762333333333333 0.505493898843981 0.0752976649055588 -0.712854692240826 -2.19582298337333 P38159 RBMX P38159.Y255.p_RBMX P38159_Y255y _1_1_255_255 P38159 P38159|P38159-2|H3BT71|H3BUY5 RNA-binding motif protein, X chromosome GG20160819_MSz_CCLE_T4D7_pY_Injection_01.4920.4920.3 21.54 11.95 2.475 5 1 1 0 653.5926 1878.8001 Y255y Hydrogen 253 (R) DDyPSRGYSDRDGYGR (D) DDY(0.99)PS(0.0)RGY(0.0)S(0.0)DRDGY(0.0)GR y:Phosphorylated Y RBMX 42331.1 4 5 6.1 110.91 HUMAN 1 -2.9628 -11.2322 HSTPPSAYGSVKAYT-p P07355-2;Y42-p HSTPPSAYGSVKAYT 0.0604753942267017 0.00900310403655759 0.406 0.422666666666667 26.6724509247603 28.9588758511027 0.406 0.422666666666667 0.00215156716310877 0.00127090302933969 5.4802138333688 6.11225949030932 P07355 ANXA2 P07355.2.Y42.p_ANXA2 P07355-2_Y42y _1_1_42_42 P07355-2 P07355-2|A6NMY6|H0YMU9 Isoform 2 of Annexin A2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.17423.17658.3 25.5 15.96 1.546 6 1 1 0 795.0702 2303.2283 Y42y TMT10 29 (K) LSLEGDHSTPPSAyGSVK (A) LS(0.0)LEGDHS(0.0)T(0.0)PPS(0.0)AY(0.99)GS(0.0)VK K:TMT10,y:Phosphorylated Y ANXA2 40695.7 4 1 8.1 109.57 HUMAN 1 26.6725 28.9589 HSTTRRNSNSPPSPS-p Q7Z5L9;S455-p HSTTRRNSNSPPSPS 0.592323910889678 0.194662208358658 0.107666666666667 0.458666666666667 4.19151597480941 9.34541625765091 0.107666666666667 0.458666666666667 0.380932829446243 0.116267510689727 0.953565558265514 1.8674741183423 Q7Z5L9 IRF2BP2 Q7Z5L9.S455.p_IRF2BP2 Q7Z5L9_S455sS457sS460s_3_3_455_460 Q7Z5L9 Q7Z5L9|Q7Z5L9-2|Q7Z5L9-3 Interferon regulatory factor 2-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5022.5022.2 9.02 9.02 1.62 5 3 3 0 949.8368 1658.7663 S455s S457s S460s Hydrogen 453 (R) RNsNsPPsPSSMNQR (R) RNS(0.99)NS(0.99)PPS(0.99)PS(0.0)S(0.0)MNQR s:Phosphorylated S IRF2BP2 61765.3 4 17 154.1 504.92 HUMAN 1 4.1915 9.3454 HSVSLNDTETRKLME-p Q9P0L0-2;T215-p HSVSLNDTETRKLME 0.219002866960347 0.516107974615491 -0.287 -0.08 12.704273897523 3.85622290390946 -0.287 -0.08 0.0536503562656411 0.411507457058479 -2.45791270871846 -0.889398067189463 Q9P0L0 VAPA Q9P0L0.2.T215.p_VAPA Q9P0L0-2_T215t _1_1_215_215 Q9P0L0-2 Q9P0L0-2 Isoform 2 of Vesicle-associated membrane protein-associated protein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10794.10794.4 9.88 9.88 1.321 4 1 1 0 751.8928 2924.5867 T215t TMT10 200 (K) QDGPMPKPHSVSLNDtETRK (L) Q(0.0)DGPM(0.0)PKPHS(0.0)VS(0.0)LN(0.0)DT(0.99)ET(0.0)RK K:TMT10,t:Phosphorylated T VAPA 32841.2 1 8 1813.1 113.12 HUMAN 1 -12.7043 -3.8562 HTDQDDPSSSDDEGM-p Q5JSH3;S470-p HTDQDDPSSSDDEGM 0.965110779182277 0.0476008280784193 0.00666666666666666 0.256333333333333 0.296777303409206 17.6877426277291 0.00666666666666666 0.256333333333333 0.933947082251292 0.0170304348491477 0.0868064799845457 3.39662372706532 Q5JSH3 WDR44 Q5JSH3.S470.p_WDR44 Q5JSH3_S470sS471sS472s_3_3_470_472 Q5JSH3 Q5JSH3|Q5JSH3-2|Q5JSH3-4 WD repeat-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18625.18838.5 21.8 21.8 7.87 7 3 3 0 802.3434 3767.7859 S470s S471s S472s TMT10 456 (K) SVRDEVFHTDQDDPsssDDEGMPYTRPVK (F) S(0.0)VRDEVFHT(0.0)DQDDPS(0.99)S(0.99)S(0.99)DDEGMPY(0.0)T(0.0)RPVK K:TMT10,s:Phosphorylated S WDR44 101935 6 21 95.1 607.92 HUMAN 1 0.2968 17.6877 HTDSLRNSSTEIRHR-p Q9UHB6-4;S93-p HTDSLRNSSTEIRHR 0.367705250238363 0.0466457413403044 0.140333333333333 -0.31 8.06094230866147 17.8077105918784 0.140333333333333 -0.31 0.156280851611794 0.0165664304214973 1.64573085813806 -3.42069088104077 Q9UHB6 LIMA1 Q9UHB6.4.S93.p_LIMA1 Q9UHB6-4_S93s _1_1_93_93 Q9UHB6-4 Q9UHB6-4|F8VRN8 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11453.11453.4 14.04 9.31 1.113 6 1 1 0 895.7184 3499.8861 S93s TMT10 74 (K) KKWENPGLGAESHTDSLRNsSTEIR (H) KKWENPGLGAES(0.0)HT(0.0)DS(0.0)LRNS(0.99)S(0.0)T(0.0)EIR K:TMT10,s:Phosphorylated S LIMA1 85678.4 1 7 42.1 822.82 HUMAN 1 8.0609 -17.8077 HTESAPNSPRIGSPL-p Q659C4;S335-p HTESAPNSPRIGSPL 0.88589421065655 0.120949741623683 0.0253333333333333 0.230666666666667 1.03359726546186 12.0953402420642 0.0253333333333333 0.230666666666667 0.788206974544705 0.0617256931845363 0.282284844571815 2.34807420128556 Q659C4 LARP1B Q659C4.S335.p_LARP1B Q659C4_S335s _1_1_335_335 Q659C4 Q659C4|Q659C4-2|Q659C4-9|D6R9W6|Q659C4-4 La-related protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30388.30388.5 18.65 18.65 1.136 7 1 1 0 817.5763 4003.8792 S335s TMT10 304 (R) SVPPTDFSQLIDCPEFVPGQAFCSHTESAPNsPR (I) S(0.0)VPPT(0.0)DFS(0.0)QLIDCPEFVPGQAFCS(0.0)HT(0.0)ES(0.0)APNS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S LARP1B 105833.8 3 3 551.1 274.41 HUMAN 1 1.0336 12.0953 HTFFRLVSPEPPPKG-p Q9H4G0;S378-p HTFFRLVSPEPPPKG 0.295665949140035 0.0902560883229834 0.189333333333333 0.276 9.96463074663392 13.8185761113052 0.189333333333333 0.276 0.10081773247166 0.0415090112804232 1.97556624717087 2.658099260217 Q9H4G0 EPB41L1 Q9H4G0.S378.p_EPB41L1 Q9H4G0_S378s _1_1_378_378 Q9H4G0 Q9H4G0|A0A0C4DH22|Q9H4G0-2|Q9H4G0-3|Q9H4G0-4 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15797.15797.2 11.28 6.33 99 1 1 1 0 751.4271 1421.8768 S378s TMT10 376 (R) LVsPEPPPK (G) LVS(1.0)PEPPPK K:TMT10,s:Phosphorylated S EPB41L1 99071.6 4 7 174.1 483.37 HUMAN 1 9.9646 13.8186 HTFYRLVSPEQPPKA-p O43491;S499-p HTFYRLVSPEQPPKA 0.80012376994327 0.263950537478569 0.0526666666666666 0.160666666666667 1.86699703588677 7.62098065643128 0.0526666666666667 0.160666666666667 0.650579383198599 0.17294258030141 0.479141878941542 1.56886042202818 O43491 EPB41L2 O43491.S499.p_EPB41L2 O43491_S499s _1_1_499_499 O43491 O43491|E9PHY5|O43491-4|E9PK52|O43491-3|E9PII3|O43491-2 Band 4.1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14563.14563.3 7.22 7.22 99 1 1 1 0 511.6215 1452.8826 S499s TMT10 497 (R) LVsPEQPPK (A) LVS(1.0)PEQPPK K:TMT10,s:Phosphorylated S EPB41L2 113099.5 2 6 469.1 302.69 HUMAN 1 1.867 7.621 HTGFCQSSGDEALSK-p P46100;S1245-p HTGFCQSSGDEALSK 0.518852766909706 0.0305140104862788 -0.105 0.318 5.26244503530046 20.4802788386913 -0.105 0.318 0.297684002586178 0.00895307280516907 -1.15194237188905 3.97895200481723 P46100 ATRX P46100.S1245.p_ATRX P46100_S1244sS1245s_2_2_1244_1245 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24341.24341.5 18.84 18.84 4.595 7 2 2 0 751.1782 3591.9296 S1244s S1245s TMT10 1226 (K) IKPVTENLVLSSHTGFCQssGDEALSK (S) IKPVT(0.0)ENLVLS(0.0)S(0.0)HT(0.0)GFCQS(0.99)S(0.99)GDEALS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ATRX 285034.2 3 55 18.1 1035.36 HUMAN 1 -5.2624 20.4803 HTGFLTEYVATRWYR-p P27361;Y204-p HTGFLTEYVATRWYR 0.030610727580468 0.00101974401157986 -0.721 -1.746 35.3889040574933 51.8610998232309 -0.721 -1.746 0.000289140943773562 6.51463394196381e-06 -8.25472780678378 -17.006355472247 P27361 MAPK3 P27361.Y204.p_MAPK3 P27361_Y204y _1_1_204_204 P27361 P27361|P27361-3|E9PQW4|P27361-2|E9PJF0|B3KR49 Mitogen-activated protein kinase 3 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.19704.19788.4 29.66 29.66 5.797 4 1 1 0 621.047 2401.1986 Y204y TMT10 190 (R) IADPEHDHTGFLTEyVATR (W) IADPEHDHT(0.0)GFLT(0.0)EY(0.99)VAT(0.0)R y:Phosphorylated Y MAPK3 43477.1 4 1 90.1 30.35 HUMAN 1 -35.3889 -51.8611 HTHKEPASGDEGIKV-p P46013;S2638-p HTHKEPASGDEGIKV 0.138843305977825 0.00129606731851265 0.311333333333333 -0.987 17.5591834444057 47.0935243040993 0.311333333333333 -0.987 0.0175421029548144 1.95275415066197e-05 3.37359548440039 -13.8331572718774 P46013 MKI67 P46013.S2638.p_MKI67 P46013_S2638s _1_1_2638_2638 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7652.7652.5 15.07 11.25 2.147 7 1 1 0 636.1298 3096.6529 S2638s TMT10 2622 (R) LTQTSGQSTHTHKEPAsGDEGIK (V) LT(0.0)QT(0.0)S(0.0)GQS(0.0)T(0.0)HT(0.0)HKEPAS(0.99)GDEGIK K:TMT10,s:Phosphorylated S MKI67 360912.4 1 90 5.1 1918.46 HUMAN 1 17.5592 -47.0935 HTIGFCPYGPRCHFI-p P47974;Y208-p HTIGFCPYGPRCHFI 0.265553122834036 0.0438410121432512 -0.159 -0.253666666666667 10.9153452771026 18.1949607545729 -0.159 -0.253666666666667 0.0809963544596157 0.0151531849695417 -2.14128503430288 -3.49892589821533 P47974 ZFP36L2 P47974.Y208.p_ZFP36L2 P47974_Y208y _1_1_208_208 P47974 P47974|Q07352 mRNA decay activator protein ZFP36L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24464.24464.3 11.61 4.38 2.153 5 1 1 0 938.1063 2732.3639 Y208y Hydrogen 192 (K) YKTELCRTFHTIGFCPyGPR (C) Y(0.0)KT(0.0)ELCRT(0.0)FHT(0.0)IGFCPY(0.99)GPR K:TMT10-Lys-Only,C:Carbamidomethylation,y:Phosphorylated Y ZFP36L2 52031.8 1 3 1672.1 122.01 HUMAN 1 -10.9153 -18.195 HTIHANGSLPKPILW-p Q9NVF9-2;S190-p HTIHANGSLPKPILW 0.402221769010663 0.057381518122085 -0.223333333333333 0.311 7.29946255531826 16.5378896410848 -0.223333333333333 0.311 0.186231758646041 0.0221927456569676 -1.51333741226224 3.16983049407926 Q9NVF9 ETNK2 Q9NVF9.2.S190.p_ETNK2 Q9NVF9-2_S190s _1_1_190_190 Q9NVF9-2 Q9NVF9-2 Isoform 2 of Ethanolamine kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17989.17989.5 19.09 19.09 7.117 2 1 1 0 566.7318 2749.6597 S190s TMT10 182 (K) IHTIHANGsLPKPILWHK (M) IHT(0.0)IHANGS(0.99)LPKPILWHK K:TMT10,s:Phosphorylated S ETNK2 45638.6 1 2 4965.1 24.56 HUMAN 1 -7.2995 16.5379 HTIIPAKSPEKCRLD-p Q9NZM1;S1915-p HTIIPAKSPEKCRLD 0.340652587960436 0.621323322524952 -0.191666666666667 -0.084 8.69755466304067 2.81057313629842 -0.191666666666667 -0.084 0.134972264302588 0.523531341852155 -1.7560090639395 -0.681575504105886 Q9NZM1 MYOF Q9NZM1.S1915.p_MYOF Q9NZM1_S1915s _1_1_1915_1915 Q9NZM1 Q9NZM1|Q9NZM1-3|Q9NZM1-6|Q9NZM1-2|Q9NZM1-5 Myoferlin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9050.9050.3 12.65 12.65 3.081 2 1 1 0 587.003 1679.0256 S1915s Hydrogen 1908 (R) HTIIPAKsPEK (C) HT(0.0)IIPAKS(0.99)PEK K:TMT10-Lys-Only,s:Phosphorylated S MYOF 236244.8 6 13 829.1 216.58 HUMAN 1 -8.6976 -2.8106 HTIKKEMSGDVRDAF-p P08133;S583-p HTIKKEMSGDVRDAF 0.255498822846135 0.00501568000679712 -0.553 0.599666666666667 11.2697877056119 33.5343260718143 -0.553 0.599666666666667 0.0746485247650021 0.000443166978786045 -2.20344300842295 7.56991605870151 P08133 ANXA6 P08133.S583.p_ANXA6 P08133_S583s _1_1_583_583 P08133 P08133 Annexin A6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35476.35476.4 14.76 10.11 9.147 2 1 1 0 623.0787 2409.3212 S583s TMT10 581 (K) EMsGDVRDAFVAIVQSVK (N) EMS(0.99)GDVRDAFVAIVQS(0.0)VK K:TMT10,s:Phosphorylated S ANXA6 76214.3 1 8 1878.1 109.53 HUMAN 1 -11.2698 33.5343 HTKEDSASVKSLDLP-p Q9UMZ2;S809-p HTKEDSASVKSLDLP 0.533929938978611 0.0019649269391477 0.106 0.835 5.04579625251651 42.2885209297933 0.106 0.835 0.312910671628444 5.90402118300652e-05 1.11244393752017 11.2101823238707 Q9UMZ2 SYNRG Q9UMZ2.S809.p_SYNRG Q9UMZ2_S809s _1_1_809_809 Q9UMZ2 Q9UMZ2|Q9UMZ2-5|Q9UMZ2-7|Q9UMZ2-3|Q9UMZ2-8|Q9UMZ2-4|Q9UMZ2-9|Q9UMZ2-6 Synergin gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.4287.4287.4 14.17 8.18 3.067 3 1 1 0 468.008 1789.0423 S809s TMT10 802 (R) HTKEDSAsVK (S) HT(0.0)KEDS(0.0)AS(0.99)VK K:TMT10,s:Phosphorylated S SYNRG 141393.5 2 8 236.1 418.49 HUMAN 1 5.0458 42.2885 HTKLLPRSLAPAGKD-p P32322-3;S339-p HTKLLPRSLAPAGKD 0.255264993053251 0.0371205867235189 0.174666666666667 0.286666666666667 11.2788733253037 19.2306672646761 0.174666666666667 0.286666666666667 0.0744925202130955 0.011938046702007 2.2050395488724 3.71244930494427 P32322 PYCR1 P32322.3.S339.p_PYCR1 P32322-3_S339s _1_1_339_339 P32322-3 P32322-3|E2QRB3 Isoform 3 of Pyrroline-5-carboxylate reductase 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7026.7026.2 9.03 7.05 99 1 1 1 0 534.2713 987.5672 S339s Hydrogen 339 (R) sLAPAGKD (-) S(1.0)LAPAGKD K:TMT10-Lys-Only,s:Phosphorylated S PYCR1 36208.1 2 5 2360.1 86.54 HUMAN 1 11.2789 19.2307 HTLHHQESRRAALLV-p Q99959;S183-p HTLHHQESRRAALLV 0.19060140727462 0.135161762775749 0.313333333333333 0.646333333333333 14.0838042150909 11.4570213149934 0.313333333333333 0.646333333333333 0.0390498687478968 0.0714986544027029 2.70831809139883 2.23532207291944 Q99959 PKP2 Q99959.S183.p_PKP2 Q99959_S183s _1_1_183_183 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.2980.2980.4 17.17 17.17 5.171 3 1 1 0 449.9656 1716.8727 S183s TMT10 172 (R) SQAGHTLHHQEsR (R) S(0.0)QAGHT(0.0)LHHQES(0.99)R s:Phosphorylated S PKP2 97926.6 3 10 257.1 399.17 HUMAN 1 14.0838 11.457 HTLQAGFSSRSQGLS-p Q9Y446-2;S107-p HTLQAGFSSRSQGLS 0.528963129635769 0.681273039774161 0.104 -0.105 5.11814803341236 2.27975291558213 0.104 -0.105 0.307740883770754 0.591595291020335 1.125665921706 -0.569831468461106 Q9Y446 PKP3 Q9Y446.2.S107.p_PKP3 Q9Y446-2_S107s _1_1_107_107 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9794.9794.3 12.68 12.68 1.15 4 1 1 0 587.6162 1680.8655 S107s TMT10 97 (R) GQYHTLQAGFsSR (S) GQY(0.0)HT(0.0)LQAGFS(0.99)S(0.0)R s:Phosphorylated S PKP3 89109.7 2 1 454.1 307.47 HUMAN 1 5.1181 -2.2798 HTPAGAATPGRGDTP-p O75533;T267-p HTPAGAATPGRGDTP 0.289073375000317 0.847878397823054 0.225666666666667 -0.022 10.1645882151471 1.00567183451966 0.225666666666667 -0.022 0.0962811299492112 0.793291528563731 2.0103201204537 -0.275273409138299 O75533 SF3B1 O75533.T267.p_SF3B1 O75533_T267t _1_1_267_267 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9243.9243.5 18.67 17.45 2.411 9 1 1 0 771.9713 3775.8487 T267t TMT10 253 (K) IWDPTPSHTPAGAAtPGRGDTPGHATPGHGGATSSAR (K) IWDPT(0.0)PS(0.0)HT(0.0)PAGAAT(0.99)PGRGDT(0.0)PGHAT(0.0)PGHGGAT(0.0)S(0.0)S(0.0)AR t:Phosphorylated T SF3B1 146569.5 2 17 53.1 735.77 HUMAN 1 10.1646 -1.0057 HTPASQQTPPLPPYA-p Q96ST3;T266-p HTPASQQTPPLPPYA 0.850370229459707 0.24895880982446 0.058 -0.353 1.36201228864359 7.95511089223243 0.058 -0.353 0.730800391159154 0.160135975889419 0.362372645455762 -1.62685995528106 Q96ST3 SIN3A Q96ST3.T266.p_SIN3A Q96ST3_T266t _1_1_266_266 Q96ST3 Q96ST3 Paired amphipathic helix protein Sin3a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15696.15696.4 18.67 18.67 3.762 7 1 1 0 856.205 3341.837 T266t TMT10 250 (K) VSKPSQLQAHTPASQQtPPLPPYASPR (S) VS(0.0)KPS(0.0)QLQAHT(0.0)PAS(0.0)QQT(0.99)PPLPPY(0.0)AS(0.0)PR K:TMT10,t:Phosphorylated T SIN3A 145971.2 1 4 501.1 291.36 HUMAN 1 1.362 -7.9551 HTPISKESRTSHKSG-p Q8IYT1;S502-p HTPISKESRTSHKSG 0.530911027960293 0.543408214995881 -0.119 -0.0643333333333333 5.08762636135941 3.56195069377389 -0.119 -0.0643333333333333 0.309911265797866 0.440357026626033 -1.12009211902346 -0.832281778155762 Q8IYT1 FAM71A Q8IYT1.S502.p_FAM71A Q8IYT1_S502s _1_1_502_502 Q8IYT1 Q8IYT1 Protein FAM71A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11899.12113.2 9.22 1.04 3.087 3 1 1 0 691.8704 1302.753 S502s TMT10 501 (K) EsRTSHK (S) ES(0.99)RT(0.0)S(0.0)HK K:TMT10,s:Phosphorylated S FAM71A 63575.5 1 1 6830.1 9.22 HUMAN 1 -5.0876 -3.562 HTPKTADSQETKESQ-p P25205-2;S773-p HTPKTADSQETKESQ 0.476173375403983 0.0133794296628059 0.141333333333333 0.596 5.93142663371084 26.054503882848 0.141333333333333 0.596 0.255186289190575 0.00248055928868451 1.27233816650506 5.30891096849922 P25205 MCM3 P25205.2.S773.p_MCM3 P25205-2_S773s _1_1_773_773 P25205-2 P25205-2|J3KQ69 Isoform 2 of DNA replication licensing factor MCM3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8783.9552.3 13.26 5.76 2.21 6 1 1 0 973.8327 2839.5252 S773s TMT10 770 (K) TADsQETKESQKVELSESR (L) T(0.0)ADS(0.99)QET(0.0)KES(0.0)QKVELS(0.0)ES(0.0)R K:TMT10,s:Phosphorylated S MCM3 96534.2 2 8 136.1 528.96 HUMAN 1 5.9314 26.0545 HTQNLRCSPLEPDFV-p Q5JSZ5;S853-p HTQNLRCSPLEPDFV 0.29343036273211 0.286251817254975 -0.219 0.121666666666667 10.0479984595398 7.16757135114406 -0.219 0.121666666666667 0.0989008795826437 0.191974199303505 -1.9900506853551 1.48989344121348 Q5JSZ5 PRRC2B Q5JSZ5.S853.p_PRRC2B Q5JSZ5_S853s _1_1_853_853 Q5JSZ5 Q5JSZ5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22251.22251.3 14.7 12.06 99 1 1 1 0 691.0015 1991.0196 S853s TMT10 852 (R) CsPLEPDFVPDEK (K) CS(1.0)PLEPDFVPDEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRRC2B 244103.4 6 66 36.2 882.05 HUMAN 1 -10.048 7.1676 HTRPRSISVEEFCEI-p Q7Z333-4;S1148-p HTRPRSISVEEFCEI 0.0530637440823008 0.150956174272158 -0.502333333333333 -0.146333333333333 27.7061465082811 10.7994268343304 -0.502333333333333 -0.146333333333333 0.00169584185229516 0.0831873551428955 -5.7634559868355 -2.12007073306643 Q7Z333 SETX Q7Z333.4.S1148.p_SETX Q7Z333-4_S1148s _1_1_1148_1148 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26798.26798.3 17.08 17.08 1.123 2 1 1 0 703.0186 2027.0771 S1148s TMT10 1146 (R) SIsVEEFCEIEVK (K) S(0.0)IS(0.99)VEEFCEIEVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SETX 310728.6 2 10 192.1 463.82 HUMAN 1 -27.7061 -10.7994 HTSGRLRSPSNDSAH-p Q5T200;S1208-p HTSGRLRSPSNDSAH 0.209628113367281 0.140900847918963 0.203333333333333 0.173333333333333 13.0983596570528 11.2153548237957 0.203333333333333 0.173333333333333 0.0489963845199741 0.0755900299855736 2.52880600674699 2.19287040482384 Q5T200 ZC3H13 Q5T200.S1208.p_ZC3H13 Q5T200_S1208s_1_1_1208_1208 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3870.3870.4 14.01 14.01 3.091 3 1 1 0 388.1885 1468.7818 S1208s N1211n TMT10 1206 (R) LRsPSnDSAHR (S) LRS(0.99)PS(0.0)N(1.0)DS(0.0)AHR s:Phosphorylated S,n:Deamidated ZC3H13 197316.7 6 24 24.1 987.82 HUMAN 1 13.0984 11.2154 HTTRARRSQESDGVE-p Q5T2T1;S409-p HTTRARRSQESDGVE 0.276220802009408 0.0740465796680761 -0.193333333333333 -0.200333333333333 10.5689517171812 15.0037973748957 -0.193333333333333 -0.200333333333333 0.0877212533678347 0.0315951384300963 -2.08075387816353 -2.87728527191573 Q5T2T1 MPP7 Q5T2T1.S409.p_MPP7 Q5T2T1_S409s _1_1_409_409 Q5T2T1 Q5T2T1|S4R337|Q5T2T1-2 MAGUK p55 subfamily member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22506.22506.3 19.68 19.68 1.108 4 1 1 0 766.0604 2216.1963 S409s TMT10 408 (R) RsQESDGVEYIFISK (H) RS(0.99)QES(0.0)DGVEY(0.0)IFIS(0.0)K K:TMT10,s:Phosphorylated S MPP7 65693.7 17 4 1298.1 156.56 HUMAN 1 -10.569 -15.0038 HTTSDSDSDDGGQEP-p Q68DA7-5;S150-p HTTSDSDSDDGGQEP 0.307142145800385 0.00956560024781388 -0.283 0.515333333333333 9.58598698283705 28.4832955480083 -0.283 0.515333333333333 0.110002182461048 0.0014179811096056 -1.9098631029486 5.97476508649778 Q68DA7 FMN1 Q68DA7.5.S150.p_FMN1 Q68DA7-5_S148sS150s_2_2_148_150 Q68DA7-5 Q68DA7-5|Q68DA7-3 Isoform 5 of Formin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11840.11840.4 12.79 12.79 1.197 9 2 2 0 881.3769 3362.5508 S148s S150s TMT10 139 (R) GTLVHTTSDsDsDDGGQEPEEGSSTNGPK (S) GT(0.0)LVHT(0.0)T(0.0)S(0.0)DS(0.99)DS(0.99)DDGGQEPEEGS(0.0)S(0.0)T(0.0)NGPK K:TMT10,s:Phosphorylated S FMN1 132895.4 1 13 727.1 236.56 HUMAN 1 -9.586 28.4833 HTVIAAQSLEALSGL-p A0A087X165;S64-p HTVIAAQSLEALSGL 0.409512605417896 0.255757481056226 0.184 0.145333333333333 7.14770704144331 7.79838435472281 0.184 0.145333333333333 0.192854286342593 0.166020441529611 1.48684458929547 1.59967144031626 A0A087X165 NotFound A0A087X165.S64.p_NotFound A0A087X165_S64s _1_1_64_64 A0A087X165 A0A087X165|Q9C0H9-5 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23145.23145.3 17.42 17.42 5.418 3 1 1 0 768.7624 2224.3065 S64s TMT10 57 (R) HTVIAAQsLEALSGLQK (A) HT(0.0)VIAAQS(0.99)LEALS(0.0)GLQK K:TMT10,s:Phosphorylated S SRCIN1 130745.5 2 3 98.1 603.22 HUMAN 1 7.1477 7.7984 HVAAGLVSPSLKSDT-p Q05519-2;S207-p HVAAGLVSPSLKSDT 0.195954837597201 0.00687243543846817 0.292666666666667 -0.605333333333333 13.8004256530708 31.0224414384526 0.292666666666667 -0.605333333333333 0.0416828528003518 0.000790234263451976 2.65634890570326 -6.73817434440418 Q05519 SRSF11 Q05519.2.S207.p_SRSF11 Q05519-2_S207s _1_1_207_207 Q05519-2 Q05519|Q05519-2|Q5T757 Isoform 2 of Serine/arginine-rich splicing factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18000.18000.3 20.77 20.77 2 6 1 1 0 926.8488 2698.5706 S207s TMT10 198 (K) LNHVAAGLVsPSLKSDTSSK (E) LNHVAAGLVS(0.99)PS(0.0)LKS(0.0)DT(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SRSF11 53527.2 19 2 185.1 475.04 HUMAN 1 13.8004 -31.0224 HVACLARSERGLGFS-p A0A0G2JPP5;S868-p HVACLARSERGLGFS 0.343780469029371 0.0961726405636739 -0.129333333333333 0.192 8.61240737533772 13.4464414835865 -0.129333333333333 0.194234097787697 0.137644626753922 0.0452226337229577 -1.74126875797989 2.59035313005558 A0A0G2JPP5 SCRIB A0A0G2JPP5.S868.p_SCRIB A0A0G2JPP5_S868s _1_1_868_868 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4006.4006.2 9.33 6.42 99 1 1 1 0 754.3735 1427.7739 S868s TMT10 861 (R) HVACLARsER (G) HVACLARS(1.0)ER C:Carbamidomethylation,s:Phosphorylated S SCRIB 178690.9 2 20 22.1 1004.81 HUMAN 1 -8.6124 13.4464 HVAGGPPSPEVGSPL-p P06401;S20-p HVAGGPPSPEVGSPL 0.157854821488714 0.126334625757057 0.319333333333333 0.281333333333333 16.0850079615454 11.8477711122357 0.319333333333333 0.281333333333333 0.0246319732266427 0.0653465838584402 3.08452975527762 2.30422961721347 P06401 PGR P06401.S20.p_PGR P06401_S20s _1_1_20_20 P06401 P06401|P06401-5|Q8NG42|Q8NG44|Q8NG45|A0A087WXR4 Progesterone receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17301.17301.4 25.17 25.17 3.821 2 1 1 0 577.5431 2227.1855 S20s TMT10 11 (R) APHVAGGPPsPEVGSPLLCR (P) APHVAGGPPS(0.99)PEVGS(0.0)PLLCR C:Carbamidomethylation,s:Phosphorylated S PGR 100348.6 5 1 260.1 397.57 HUMAN 1 16.085 11.8478 HVDGAAKSLDKQKKK-p Q13177;S217-p HVDGAAKSLDKQKKK 0.167303178237928 0.00313902414655535 -0.275666666666667 -0.911333333333333 15.5222515392138 37.6008939997908 -0.275666666666667 -0.911333333333333 0.0280397957693285 0.000173744313742504 -2.97698585440455 -9.10290662926727 Q13177 PAK2 Q13177.S217.p_PAK2 Q13177_S217s _1_1_217_217 Q13177 Q13177 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19069.19069.5 18.02 18.02 2.847 3 1 1 0 629.1412 3061.7137 S217s TMT10 197 (R) SVIDPVPAPVGDSHVDGAAKsLDK (Q) S(0.0)VIDPVPAPVGDS(0.0)HVDGAAKS(0.99)LDK K:TMT10,s:Phosphorylated S PAK2 58326.8 1 29 272.1 393.22 HUMAN 1 -15.5223 -37.6009 HVEGNRLSPFLIPSP-p Q6N021;S15-p HVEGNRLSPFLIPSP 0.586619055126329 0.665637680643183 0.085 0.0476666666666667 4.26224755230488 2.41947264326177 0.085 0.0476666666666667 0.374778997155971 0.572865588900954 0.966938139775502 0.59974082550959 Q6N021 TET2 Q6N021.S15.p_TET2 Q6N021_S15s _1_1_15_15 Q6N021 E7EQS8|Q6N021|Q6N021-3|E7EPB1|Q6N021-2 Methylcytosine dioxygenase TET2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24706.24706.4 13.09 13.09 1.152 5 1 1 0 857.1928 3345.7827 S15s Hydrogen 6 (R) TNHVEGNRLsPFLIPSPPICQTEPLATK (L) T(0.0)NHVEGNRLS(0.99)PFLIPS(0.0)PPICQT(0.0)EPLAT(0.0)K C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S TET2 226374.6 2 1 594.1 264.06 HUMAN 1 4.2622 2.4195 HVEGPLPSPVTNGTS-p Q15599;S254-p HVEGPLPSPVTNGTS 0.836292838067203 0.0407891339346491 -0.042 -0.269666666666667 1.50144649151136 18.6256490842218 -0.042 -0.269666666666667 0.707710030283485 0.0137225585221067 -0.395326630243575 -3.58694398874603 Q15599 SLC9A3R2 Q15599.S254.p_SLC9A3R2 Q15599_S254s _1_1_254_254 Q15599 Q15599|Q15599-2|H3BQS0|Q15599-3 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17972.17972.4 27.86 27.86 1.117 9 1 1 0 936.444 3662.7918 S254s TMT10 241 (R) VTPTEEHVEGPLPsPVTNGTSPAQLNGGSACSSR (S) VT(0.0)PT(0.0)EEHVEGPLPS(0.99)PVT(0.0)NGT(0.0)S(0.0)PAQLNGGS(0.0)ACS(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S SLC9A3R2 37641.3 4 4 2026.1 101.71 HUMAN 1 -1.5014 -18.6256 HVEQKRLSNGKLVEE-p Q13625-3;S212-p HVEQKRLSNGKLVEE 0.620518993085913 0.00741055972021653 0.117666666666667 -0.670333333333333 3.85192471037374 30.4579939834031 0.117666666666667 -0.670333333333333 0.411914925794755 0.000899913157584246 0.888716938188805 -6.56207764915826 Q13625 TP53BP2 Q13625.3.S212.p_TP53BP2 Q13625-3_S212s_1_1_212_212 Q13625-3 Q13625-3|Q13625-2 Isoform 3 of Apoptosis-stimulating of p53 protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32308.32890.4 17.35 17.35 11.602 1 1 1 0 822.442 3205.797 S212s N213n TMT10 210 (K) RLsnGKLVEEIEQMNNLFQQK (Q) RLS(1.0)N(0.99)GKLVEEIEQMN(0.0)N(0.0)LFQQK K:TMT10,s:Phosphorylated S,n:Deamidated TP53BP2 127005.7 4 1 834.1 215.28 HUMAN 1 3.8519 -30.458 HVGNGEISPMEPQGT-p Q68CP9;S1391-p HVGNGEISPMEPQGT 0.620926888590319 0.751065381254245 0.094 -0.031 3.84770987664918 1.71832416583891 0.094 -0.031 0.412314883826744 0.673236391311964 0.88790496745103 -0.445428956710482 Q68CP9 ARID2 Q68CP9.S1391.p_ARID2 Q68CP9_S1391s_1_1_1391_1391 Q68CP9 Q68CP9 AT-rich interactive domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17565.17565.4 16.95 9.11 3.432 6 1 1 0 1052.2649 4125.0559 N1387n S1391s TMT10 1381 (K) TSNHVGnGEIsPMEPQGTLDITQQDTAKGDQLER (I) T(0.0)S(0.0)N(0.0)HVGN(0.99)GEIS(0.99)PMEPQGT(0.0)LDIT(0.0)QQDT(0.0)AKGDQLER K:TMT10,n:Deamidated,s:Phosphorylated S ARID2 199041.9 1 4 1654.1 123.29 HUMAN 1 3.8477 -1.7183 HVGSRLYSVSYLLKD-p P21333-2;S2607-p HVGSRLYSVSYLLKD 0.298727247909978 0.0200457591831319 -0.151666666666667 -0.333333333333333 9.86332348420536 23.2789634604762 -0.151666666666667 -0.333333333333333 0.103197137655985 0.0047000627257799 -1.95797457497482 -4.61543502400905 P21333 FLNA P21333.2.S2607.p_FLNA P21333-2_S2607s _1_1_2607_2607 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30974.30974.2 13.82 6.9 2.32 4 1 1 0 812.4611 1543.95 S2607s TMT10 2605 (R) LYsVSYLLK (D) LY(0.0)S(0.99)VS(0.0)Y(0.0)LLK K:TMT10,s:Phosphorylated S FLNA 282751.6 2 23 198.1 454.47 HUMAN 1 -9.8633 -23.279 HVKEKRRSAEVDDGA-p F5H619;S1653-p HVKEKRRSAEVDDGA 0.157598656025864 0.350852331061158 -0.234666666666667 0.0986666666666667 16.0960920052376 6.02970929063931 -0.234666666666667 0.0986666666666667 0.0245691877728858 0.249476171647216 -3.08666275347663 1.28954614287646 F5H619 HEATR5A F5H619.S1653.p_HEATR5A F5H619_S1653s _1_1_1653_1653 F5H619 F5H619|Q86XA9|Q86XA9-2 HEAT repeat-containing protein 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21124.21124.4 24.31 24.31 12.829 3 1 1 0 943.4847 3690.9317 S1653s Hydrogen 1653 (R) sAEVDDGAAEKETLPEFGEGKDTGGLVPGK (S) S(0.99)AEVDDGAAEKET(0.0)LPEFGEGKDT(0.0)GGLVPGK K:TMT10-Lys-Only,s:Phosphorylated S HEATR5A 226066 3 1 2924.1 65.83 HUMAN 1 -16.0961 6.0297 HVKHLSASQKALKEK-p P13073;S58-p HVKHLSASQKALKEK 0.162411251147367 0.0429372606840473 0.231666666666667 0.261333333333333 15.807985734038 18.3197415190039 0.231666666666667 0.261333333333333 0.026254359431668 0.0147240013332452 3.03140773856893 3.52431619967396 P13073 COX4I1 P13073.S58.p_COX4I1 P13073_S58s _1_1_58_58 P13073 P13073|H3BNV9|H3BN72|Q86WV2 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5753.5753.3 9.96 6.7 2.39 2 1 1 0 436.908 1228.7414 S58s TMT10 54 (K) HLSAsQK (A) HLS(0.0)AS(0.99)QK K:TMT10,s:Phosphorylated S COX4I1 19633.4 3 1 4480.1 30.88 HUMAN 1 15.808 18.3197 HVKKLSKSQNDMTSE-p Q4VX76;S203-p HVKKLSKSQNDMTSE 0.170325535786342 0.311248662785131 0.217666666666667 0.133 15.3398092793028 6.69960051877141 0.217666666666667 0.133 0.0292428079500019 0.213815875674983 2.94242899193916 1.40794808106467 Q4VX76 SYTL3 Q4VX76.S203.p_SYTL3 Q4VX76_S203s _1_1_203_203 Q4VX76 Q4VX76 Synaptotagmin-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7406.7406.3 11.92 11.92 7.668 3 1 1 0 526.5818 1497.7619 S203s TMT10 203 (K) sQNDMTSEK (H) S(0.99)QNDMT(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S SYTL3 69756.5 5 3 1933.1 106.31 HUMAN 1 15.3398 6.6996 HVKVQKGSEPLGISI-p Q8TDM6;S1357-p HVKVQKGSEPLGISI 0.881763216813434 0.793488917262182 0.0256666666666667 0.0386666666666667 1.07507132709728 1.40037394670807 0.0256666666666667 0.0386666666666667 0.780715617816089 0.724373585628333 0.292604701738564 0.371458681873573 Q8TDM6 DLG5 Q8TDM6.S1357.p_DLG5 Q8TDM6_S1357s _1_1_1357_1357 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2|Q8TDM6-5 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22054.22054.3 15.78 15.78 2.743 3 1 1 0 832.4738 2415.4426 S1357s TMT10 1353 (K) VQKGsEPLGISIVSGEK (G) VQKGS(0.99)EPLGIS(0.0)IVS(0.0)GEK K:TMT10,s:Phosphorylated S DLG5 215575.4 3 35 34.1 890.58 HUMAN 1 1.0751 1.4004 HVLPEGRSPGPPALK-p Q8IU81;S66-p HVLPEGRSPGPPALK 0.990179909621423 0.192167085892998 0.00299999999999998 0.140666666666667 0.0886161630887395 9.41690286412223 0.00299999999999998 0.140666666666667 0.97980214004722 0.114369365989253 0.0265081965300559 1.87984797306656 Q8IU81 IRF2BP1 Q8IU81.S66.p_IRF2BP1 Q8IU81_S66s _1_1_66_66 Q8IU81 Q8IU81 Interferon regulatory factor 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12294.12294.4 15.61 15.61 15.61 2 1 1 0 545.8058 2100.233 S66s TMT10 58 (R) SHVLPEGRsPGPPALK (H) S(0.0)HVLPEGRS(0.99)PGPPALK K:TMT10,s:Phosphorylated S IRF2BP1 62599.7 21 1 274.1 392.67 HUMAN 1 0.0886 9.4169 HVLVLRKSNFAEALA-p P07237;S32-p HVLVLRKSNFAEALA 0.122965070684372 0.193261859570953 -0.584333333333333 0.169666666666667 18.9533236628434 9.38616198658844 -0.584333333333333 0.169666666666667 0.0127252883984701 0.115181784132324 -3.65783566009416 1.87452661612526 P07237 P4HB P07237.S32.p_P4HB P07237_S32s _1_1_32_32 P07237 P07237|H7BZ94|I3L514|I3L1Y5 Protein disulfide-isomerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18847.18847.3 17.09 17.09 99 1 1 1 0 566.299 1616.9161 S32s TMT10 32 (K) sNFAEALAAHK (Y) S(1.0)NFAEALAAHK K:TMT10,s:Phosphorylated S P4HB 57514.7 1 3 2940.1 65.3 HUMAN 1 -18.9533 9.3862 HVPENSDTEQDVLTV-p Q9H2Y7;T1372-p HVPENSDTEQDVLTV 0.559790063080621 0.00373802029463207 -0.0853333333333333 -0.618666666666667 4.65063495382184 36.0072900500579 -0.0853333333333334 -0.618666666666667 0.342717676352579 0.000250767352571763 -1.03962762778832 -8.47252824725357 Q9H2Y7 ZNF106 Q9H2Y7.T1372.p_ZNF106 Q9H2Y7_S1370sT1372t_2_2_1370_1372 Q9H2Y7 Q9H2Y7|Q9H2Y7-2|A0A0C4DGM5 Zinc finger protein 106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15734.15941.4 16.58 16.58 11.336 3 2 2 0 820.9296 3120.762 S1370s T1372t TMT10 1363 (R) AAHVPENsDtEQDVLTVKPVRK (V) AAHVPENS(0.99)DT(0.99)EQDVLT(0.0)VKPVRK K:TMT10,s:Phosphorylated S,t:Phosphorylated T ZNF106 210818.9 5 18 170.1 490.3 HUMAN 1 -4.6506 -36.0073 HVQFFDDSPTRGWVS-p P52701;S137-p HVQFFDDSPTRGWVS 0.706123032840062 0.903842070055704 0.0526666666666667 -0.012 2.84293140009804 0.612380216236484 0.0526666666666667 -0.012 0.519645128158929 0.868484312935043 0.688325253964511 -0.173590330674749 P52701 MSH6 P52701.S137.p_MSH6 P52701_S137s _1_1_137_137 P52701 P52701|P52701-2|A0A087WWJ1|F8WAX8 DNA mismatch repair protein Msh6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22041.22041.3 19.86 19.86 2 3 1 1 0 848.4348 2463.3185 S137s TMT10 129 (R) VHVQFFDDsPTRGWVSK (R) VHVQFFDDS(0.99)PT(0.0)RGWVS(0.0)K K:TMT10,s:Phosphorylated S MSH6 154608.6 10 8 875.1 209.27 HUMAN 1 2.8429 -0.6124 HVQLDQRSLVLNTEP-p Q9BYM8;S272-p HVQLDQRSLVLNTEP 0.538800686374925 0.250441300337034 0.089 -0.13 4.96266203659296 7.92230736720554 0.089 -0.13 0.31895821804129 0.161350109056458 1.09721125045182 -1.621171463685 Q9BYM8 RBCK1 Q9BYM8.S272.p_RBCK1 Q9BYM8_S272s_1_1_272_272 Q9BYM8 Q9BYM8|Q9BYM8-3|G3XAG9 RanBP-type and C3HC4-type zinc finger-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27887.27887.4 28.05 22.22 2.157 5 1 1 0 1337.4111 5265.6622 S272s N276n TMT10 255 (K) QQQQEGNYLQHVQLDQRsLVLnTEPAECPVCYSVLAPGEAVVLR (E) QQQQEGN(0.0)Y(0.0)LQHVQLDQRS(0.99)LVLN(0.99)T(0.0)EPAECPVCY(0.0)S(0.0)VLAPGEAVVLR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated RBCK1 59396.4 2 1 3888.1 41.32 HUMAN 1 4.9627 -7.9223 HVQSSSDSSDEPAEK-p Q8WUF8;S219-p HVQSSSDSSDEPAEK 0.623139860687409 0.360983783240862 0.0816666666666667 0.0923333333333334 3.81675779561284 5.87164420330227 0.0816666666666667 0.0923333333333334 0.41526394022384 0.258723322442637 0.881936559043669 1.2613700541814 Q8WUF8 FAM172A Q8WUF8.S219.p_FAM172A Q8WUF8_S219s _1_1_219_219 Q8WUF8 Q8WUF8|Q8WUF8-3|Q8WUF8-4|E9PBM2|Q8WUF8-2|B4DMI0 Protein FAM172A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6719.6719.3 13.68 13.68 1.107 5 1 1 0 804.0598 2330.1988 S219s TMT10 211 (K) IHVQSSSDsSDEPAEKR (E) IHVQS(0.0)S(0.0)S(0.0)DS(0.99)S(0.0)DEPAEKR K:TMT10,s:Phosphorylated S FAM172A 48199.7 1 2 4344.1 33.11 HUMAN 1 3.8168 5.8716 HVRKRCLSETHGERE-p O00257;S415-p HVRKRCLSETHGERE 0.00874686268802314 0.00128078099430948 -1.62433333333333 -1.32833333333333 51.3052109569151 47.3544172794067 -1.62433333333333 -1.32833333333333 7.404213008905e-06 1.83890067433838e-05 -16.6563345065286 -13.9910169075268 O00257 CBX4 O00257.S415.p_CBX4 O00257_S415s _1_1_415_415 O00257 O00257|O00257-3 E3 SUMO-protein ligase CBX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4672.4672.3 18.23 18.23 3.941 2 1 1 0 637.948 1831.8628 S415s Hydrogen 413 (R) CLsETHGEREPCK (K) CLS(0.99)ET(0.0)HGEREPCK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S CBX4 61708.7 5 3 1504.1 135.77 HUMAN 1 -51.3052 -47.3544 HVSRYGGSPRDPVLT-p Q86XL3;S512-p HVSRYGGSPRDPVLT 0.661198352552531 0.00162991586391422 -0.084 -1.03833333333333 3.36412144362431 44.4347598958723 -0.084 -1.03833333333333 0.460879993016246 3.60183662964939e-05 -0.793446992190282 -12.3179115626215 Q86XL3 ANKLE2 Q86XL3.S512.p_ANKLE2 Q86XL3_S512s _1_1_512_512 Q86XL3 Q86XL3|Q86XL3-2 Ankyrin repeat and LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15763.15763.3 13.47 13.47 2.829 3 1 1 0 580.6403 1659.938 S512s TMT10 509 (R) YGGsPRDPVLTLR (A) Y(0.0)GGS(0.99)PRDPVLT(0.0)LR s:Phosphorylated S ANKLE2 104968.3 2 4 897.1 204.02 HUMAN 1 -3.3641 -44.4348 HVTRRTLSMDKGF__-p P17858-2;S822-p HVTRRTLSMDKGF__ 0.134264480831341 0.00839507320642349 -0.467333333333333 -1.09066666666667 17.9232052668168 29.5051143754871 -0.467333333333333 -1.09066666666667 0.0161316753526796 0.0011206979111272 -3.44674018610744 -6.27322710756307 P17858 PFKL P17858.2.S822.p_PFKL P17858-2_S822s _1_1_822_822 P17858-2 P17858-2 Isoform 2 of ATP-dependent 6-phosphofructokinase, liver type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21031.21031.2 9.15 9.15 2.969 2 1 1 0 718.8663 1356.7597 S822s TMT10 820 (R) TLsMDKGF (-) T(0.0)LS(0.99)MDKGF K:TMT10,s:Phosphorylated S PFKL 91228.4 2 2 4510.1 30.49 HUMAN 1 -17.9232 -29.5051 HVVDLLDSIEDMDLC-p Q9NRH1;S136-p HVVDLLDSIEDMDLC 0.233628206047255 0.991810855041784 -0.215 -0.00199999999999997 12.1041528698069 0.0525526404075262 -0.215 -0.00199999999999996 0.0616005674808371 0.987972226321534 -2.35082210536591 -0.0157827097020087 Q9NRH1 YAE1D1 Q9NRH1.S136.p_YAE1D1 Q9NRH1_S136s _1_1_136_136 Q9NRH1 Q9NRH1 Yae1 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32888.32888.5 13.08 13.08 13.075 4 1 1 0 731.7693 3574.8537 S136s TMT10 123 (K) SITPPSHVVDLLDsIEDMDLCHVVPAEK (K) S(0.0)IT(0.0)PPS(0.0)HVVDLLDS(0.99)IEDMDLCHVVPAEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S YAE1D1 25755.4 1 2 4537.1 30.2 HUMAN 1 -12.1042 -0.0526 HVVEGEPYAGYDRHN-p O75063;Y138-p HVVEGEPYAGYDRHN 0.20055874973276 0.651393077726547 0.297333333333333 0.16 13.5742238445882 2.54144137426353 0.297333333333334 0.16 0.0439114335556822 0.557000855967679 2.61507210346369 0.625548773732493 O75063 FAM20B O75063.Y138.p_FAM20B O75063_Y138y _1_1_138_138 O75063 O75063 Glycosaminoglycan xylosylkinase GG20160819_MSz_CCLE_T4D7_pY_Injection_02.14877.14933.5 34.12 26.48 2.754 2 1 1 0 656.1063 3196.5398 Y138y TMT10 130 (R) DHVVEGEPyAGYDRHNAEVAAFHLDR (I) DHVVEGEPY(0.99)AGY(0.0)DRHNAEVAAFHLDR y:Phosphorylated Y FAM20B 46888.1 2 1 72.1 34.12 HUMAN 1 13.5742 2.5414 HYATMARSAVRPASL-p Q96N67-6;S882-p HYATMARSAVRPASL 0.352523805432325 0.0450881171308284 0.139666666666667 -0.328666666666667 8.41048838525116 18.0115523958849 0.139666666666667 -0.328666666666667 0.144195318776328 0.015806829194311 1.70630547299018 -3.46176729506183 Q96N67 DOCK7 Q96N67.6.S882.p_DOCK7 Q96N67-6_S882s _1_1_882_882 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3|Q96N67-4 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11195.11195.3 10.91 10.91 2.275 2 1 1 0 536.2924 1526.8964 S882s TMT10 882 (R) sAVRPASLNLNR (S) S(0.99)AVRPAS(0.0)LNLNR s:Phosphorylated S DOCK7 243551.1 2 12 345.1 352.4 HUMAN 1 8.4105 -18.0116 HYELSGDSDLDLLGD-p Q5VWN6;S1830-p HYELSGDSDLDLLGD 0.141525291296506 0.837128948953312 0.252 -0.021 17.36105759564 1.08448980121795 0.252 -0.021 0.0183609116325557 0.779024327095088 3.3340900020691 -0.294910174711968 Q5VWN6 FAM208B Q5VWN6.S1830.p_FAM208B Q5VWN6_S1827sS1830s_2_2_1827_1830 Q5VWN6 Q5VWN6|Q5VWN6-2 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23806.23806.4 12.8 12.8 2.435 4 2 2 0 931.8931 3564.6169 S1827s S1830s TMT10 1813 (R) DGEVGVNSDMHYELsGDsDLDLLGDCRNPR (L) DGEVGVNS(0.0)DMHY(0.0)ELS(0.99)GDS(0.99)DLDLLGDCRNPR C:Carbamidomethylation,s:Phosphorylated S FAM208B 271861.7 2 22 275.1 391.61 HUMAN 1 17.3611 -1.0845 HYQGEEKSD______-p P13984;S248-p HYQGEEKSD______ 0.0228812353830922 0.0110164440603809 0.725333333333333 0.445 37.9600116480694 27.4297764395196 0.725333333333333 0.445 0.000159955373849846 0.00180726715577101 9.27059938275649 5.67867355338402 P13984 GTF2F2 P13984.S248.p_GTF2F2 P13984_S248s _1_1_248_248 P13984 P13984 General transcription factor IIF subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4665.4665.3 10.85 10.85 9.271 2 1 1 0 544.2557 1550.7851 S248s TMT10 241 (R) HYQGEEKsD (-) HY(0.0)QGEEKS(0.99)D K:TMT10,s:Phosphorylated S GTF2F2 28436.8 2 1 6574.1 10.85 HUMAN 1 37.96 27.4298 HYQKETESAPGSPRA-p Q6PKG0;S517-p HYQKETESAPGSPRA 0.109786874335587 0.0390045026256859 0.845 -0.726333333333333 20.0780103464204 18.9171907887437 0.845 -0.726333333333333 0.00982197818831188 0.0128316031984705 3.89571226246661 -3.64714523843662 Q6PKG0 LARP1 Q6PKG0.S517.p_LARP1 Q6PKG0_S517s _1_1_517_517 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4116.4116.4 21.59 21.59 1.12 4 1 1 0 564.0319 2173.1402 S517s TMT10 509 (R) QHYQKETEsAPGSPR (A) QHY(0.0)QKET(0.0)ES(0.99)APGS(0.0)PR K:TMT10,s:Phosphorylated S LARP1 123907.4 5 44 28.1 931.95 HUMAN 1 20.078 -18.9172 HYQKNINSLQEELLQ-p Q8IWJ2;S236-p HYQKNINSLQEELLQ 0.729757185802638 0.00734738797149871 -0.0516666666666667 -0.623333333333333 2.59808127687411 30.522523678088 -0.0516666666666667 -0.623333333333333 0.549783715934473 0.000886640636895504 -0.637525149522107 -6.5820184749246 Q8IWJ2 GCC2 Q8IWJ2.S236.p_GCC2 Q8IWJ2_S236s _1_1_236_236 Q8IWJ2 Q8IWJ2 GRIP and coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.33291.33291.3 14.77 14.77 99 1 1 1 0 694.0546 2000.1792 S236s TMT10 233 (K) NINsLQEELLQLK (A) NINS(1.0)LQEELLQLK K:TMT10,s:Phosphorylated S GCC2 196990.2 1 89 9.3 1298.62 HUMAN 1 -2.5981 -30.5225 HYQPVAGSDDWGSTP-p O94830;S178-p HYQPVAGSDDWGSTP 0.528655235546943 0.570503345439926 0.102 -0.0616666666666666 5.12296638798098 3.28492800535347 0.102 -0.0616666666666666 0.307399644704269 0.469361215031916 1.12654532437258 -0.777598134982421 O94830 DDHD2 O94830.S178.p_DDHD2 O94830_S178s _1_1_178_178 O94830 O94830 Phospholipase DDHD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16941.16941.4 15.81 15.81 1.101 5 1 1 0 774.1159 3013.4788 S178s TMT10 168 (K) LMVHYQPVAGsDDWGSTPTEQGRPR (T) LMVHY(0.0)QPVAGS(0.99)DDWGS(0.0)T(0.0)PT(0.0)EQGRPR s:Phosphorylated S DDHD2 81715 1 1 5855.1 15.81 HUMAN 1 5.123 -3.2849 HYRIIDVSTVKELCR-p Q9Y3B8;S170-p HYRIIDVSTVKELCR 0.972086932110301 0.245900104435064 0.00533333333333332 0.131333333333333 0.238503938242987 8.02879483646313 0.00533333333333332 0.131333333333333 0.946563178192125 0.157441970399661 0.0701903514152001 1.63963372116407 Q9Y3B8 REXO2 Q9Y3B8.S170.p_REXO2 Q9Y3B8_S170s _1_1_170_170 Q9Y3B8 Q9Y3B8|F5GYG5|Q9Y3B8-3|Q9Y3B8-2|H0YG54 Oligoribonuclease, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22622.22622.2 10.39 3.7 1.142 2 1 1 0 706.9127 1332.8503 S170s TMT10 166 (R) IIDVsTVK (E) IIDVS(0.99)T(0.0)VK K:TMT10,s:Phosphorylated S REXO2 27060.5 1 1 6643.1 10.39 HUMAN 1 0.2385 8.0288 HYRPQQESPSPQQQL-p O75376-2;S1920-p HYRPQQESPSPQQQL 0.338303322331957 0.213174134564796 0.16 0.124333333333333 8.76179844968718 8.83032542332109 0.16 0.124333333333333 0.132990357976349 0.130908382772406 1.76712992058444 1.77836529585197 O75376 NCOR1 O75376.2.S1920.p_NCOR1 O75376-2_S1920sS1922s_2_2_1920_1922 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13443.13443.4 14.51 10.74 4.093 6 2 2 0 1115.2655 4298.0999 S1920s S1922s TMT10 1906 (R) QYEGPLHHYRPQQEsPsPQQQLPPSSQAEGMGQVPR (T) QY(0.0)EGPLHHY(0.0)RPQQES(0.99)PS(0.99)PQQQLPPS(0.0)S(0.0)QAEGMGQVPR s:Phosphorylated S NCOR1 259453.1 2 43 35.1 889.74 HUMAN 1 8.7618 8.8303 HYSSRLGSAIFSSGD-p Q92673;S2183-p HYSSRLGSAIFSSGD 0.976448638123499 0.178276317503774 0.005 0.197 0.203499467715065 9.85285815377749 0.00500000000000001 0.197 0.954223379923867 0.103446114900958 0.0601129494887234 1.95538021307784 Q92673 SORL1 Q92673.S2183.p_SORL1 Q92673_S2183s _1_1_2183_2183 Q92673 Q92673|E9PPB3|E9PP43|E9PS32|E9PKB0 Sortilin-related receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.37809.37809.3 17.33 17.33 2.496 5 1 1 0 1265.896 3715.708 S2183s TMT10 2181 (R) LGsAIFSSGDDLGEDDEDAPMITGFSDDVPMVIA (-) LGS(0.99)AIFS(0.0)S(0.0)GDDLGEDDEDAPMIT(0.0)GFS(0.0)DDVPMVIA s:Phosphorylated S SORL1 253956.2 3 1 5671.1 17.33 HUMAN 1 0.2035 9.8529 HYTGDKASPDQNAST-p Q14677-3;S299-p HYTGDKASPDQNAST 0.638098179248838 0.401305583449679 -0.075 0.082 3.6400798661604 5.27402022791228 -0.075 0.082 0.432505877238029 0.296891645802361 -0.847673359660052 1.15380082373963 Q14677 CLINT1 Q14677.3.S299.p_CLINT1 Q14677-3_S299s _1_1_299_299 Q14677-3 Q14677-3|Q14677-2 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15282.15282.5 23.46 23.46 1.138 9 1 1 0 788.0021 3856.008 S299s TMT10 284 (K) TIDLGAAAHYTGDKAsPDQNASTHTPQSSVK (T) T(0.0)IDLGAAAHY(0.0)T(0.0)GDKAS(0.99)PDQNAS(0.0)T(0.0)HT(0.0)PQS(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S CLINT1 70350.7 3 19 632.1 256.73 HUMAN 1 -3.6401 5.274 HYTPPLQSPIIDNDP-p Q5TKA1-2;S325-p HYTPPLQSPIIDNDP 0.814137925555095 0.885150204505266 -0.0353333333333333 -0.0146666666666666 1.71614394297225 0.745361739485822 -0.0353333333333333 -0.0146666666666666 0.673574450837908 0.842294230802147 -0.44498026814214 -0.208706117877437 Q5TKA1 LIN9 Q5TKA1.2.S325.p_LIN9 Q5TKA1-2_S325s _1_1_325_325 Q5TKA1-2 Q5TKA1-2|Q5TKA1-3|C9J5J4 Isoform 2 of Protein lin-9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30863.30863.3 18.66 18.66 6.713 4 1 1 0 1022.859 2986.5988 S325s TMT10 317 (R) LHYTPPLQsPIIDNDPLLGQSPWR (S) LHY(0.0)T(0.0)PPLQS(0.99)PIIDNDPLLGQS(0.0)PWR s:Phosphorylated S LIN9 64323.3 2 7 1238.1 163 HUMAN 1 -1.7161 -0.7454 IACDEEFSDSEDEGE-p Q92769;S422-p IACDEEFSDSEDEGE 0.814736210740653 0.115798882599406 0.0436666666666667 0.19 1.70788896744913 12.3492851880869 0.0436666666666667 0.19 0.674855984146282 0.0582199034912631 0.443094148933132 2.39321046343619 Q92769 HDAC2 Q92769.S422.p_HDAC2 Q92769_S422s _1_1_422_422 Q92769 Q92769|Q92769-3 Histone deacetylase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10547.10753.3 21.33 21.33 1.352 2 1 1 0 823.0033 2387.0255 S422s TMT10 415 (R) IACDEEFsDSEDEGEGGRR (N) IACDEEFS(0.99)DS(0.0)EDEGEGGRR C:Carbamidomethylation,s:Phosphorylated S HDAC2 55933.8 7 10 700.2 240.49 HUMAN 1 1.7079 12.3493 IACEEEFSDSEEEGE-p Q13547;S421-p IACEEEFSDSEEEGE 0.962849921197336 0.210184640168216 0.0116666666666667 0.137 0.317252670458251 8.91118374888057 0.0116666666666667 0.137 0.929554233119861 0.128493637934445 0.0925985021204049 1.79235052143271 Q13547 HDAC1 Q13547.S421.p_HDAC1 Q13547_S421s _1_1_421_421 Q13547 Q13547 Histone deacetylase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12685.12685.4 19.63 19.63 3.268 2 1 1 0 674.8004 2616.2136 S421s TMT10 414 (R) IACEEEFsDSEEEGEGGRK (N) IACEEEFS(0.99)DS(0.0)EEEGEGGRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HDAC1 55672.5 5 5 700.1 240.49 HUMAN 1 0.3173 8.9112 IADELPRSRARKLAD-p Q8NFV4;S196-p IADELPRSRARKLAD 0.883845724742002 0.351661235235236 0.0226666666666667 0.122666666666667 1.05990689274869 6.01615089765172 0.0226666666666667 0.122666666666667 0.783446438688236 0.25025623715188 0.288838663371399 1.28713326904218 Q8NFV4 ABHD11 Q8NFV4.S196.p_ABHD11 Q8NFV4_S196s _1_1_196_196 Q8NFV4 Q8NFV4|Q8NFV4-4 Protein ABHD11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16484.16484.3 8.88 8.88 99 1 1 1 0 555.2958 1583.9067 S196s TMT10 186 (R) AINIADELPRsR (A) AINIADELPRS(1.0)R s:Phosphorylated S ABHD11 34746.4 1 1 6885.1 8.88 HUMAN 1 1.0599 6.0162 IADHCPDSACKQDLL-p P35221;S770-p IADHCPDSACKQDLL 0.910851396962142 0.00498241622483435 -0.0176666666666667 0.578666666666667 0.796902746442184 33.5798532056954 -0.0176666666666667 0.578666666666667 0.832357170800832 0.000438545520642751 -0.222127894948539 7.5857522472865 P35221 CTNNA1 P35221.S770.p_CTNNA1 P35221_S770s _1_1_770_770 P35221 P35221-2|G3XAM7|P35221-3 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7416.7416.3 16.27 16.27 16.27 2 1 1 0 638.2955 1832.9035 S770s TMT10 762 (R) TIADHCPDsACK (Q) T(0.0)IADHCPDS(0.99)ACK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CTNNA1 100754.2 2 20 169.1 491.55 HUMAN 1 -0.7969 33.5799 IADLAGNSEVILPVP-p P06733;S141-p IADLAGNSEVILPVP 0.616312626410794 0.506954929539413 -0.0806666666666667 -0.0693333333333333 3.89946954558649 3.95301800375366 -0.0806666666666667 -0.0693333333333334 0.407430038939259 0.402437274999555 -0.897863708868177 -0.907985783777552 P06733 ENO1 P06733.S141.p_ENO1 P06733_S141s _1_1_141_141 P06733 P06733|P06733-2 Alpha-enolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29089.29089.4 26.88 26.88 14.441 2 1 1 0 888.2218 3469.8956 S141s TMT10 133 (R) HIADLAGNsEVILPVPAFNVINGGSHAGNK (L) HIADLAGNS(0.99)EVILPVPAFNVINGGS(0.0)HAGNK K:TMT10,s:Phosphorylated S ENO1 47510.4 3 6 623.1 259.34 HUMAN 1 -3.8995 -3.953 IAEGKAASWPSRSLP-p P35670;S132-p IAEGKAASWPSRSLP 0.0371932005736469 0.00178284028886761 -0.788666666666667 -1.01066666666667 32.6378369968579 43.3784416423066 -0.788666666666667 -1.01066666666667 0.000544773909866998 4.59362814184332e-05 -7.2766077828885 -11.7605237278124 P35670 ATP7B P35670.S132.p_ATP7B P35670_S132s _1_1_132_132 P35670 P35670|P35670-4|B7ZLR4|F5H748|E7ET55|P35670-3|P35670-2|F5H562 Copper-transporting ATPase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9281.9281.2 11.57 3.44 1.533 2 1 1 0 542.2626 1003.5522 S132s TMT10 130 (K) AAsWPSR (S) AAS(0.99)WPS(0.0)R s:Phosphorylated S ATP7B 158914.5 1 1 3470.1 50.21 HUMAN 1 -32.6378 -43.3784 IAEKLGGSLIVAFEG-p P60981;S155-p IAEKLGGSLIVAFEG 0.654054249121603 0.354283964218025 0.065 0.149 3.45722606808222 5.97500093130719 0.065 0.149 0.451104742809195 0.252638716836982 0.811843838356832 1.27980564181798 P60981 DSTN P60981.S155.p_DSTN P60981_S155s _1_1_155_155 P60981 P60981|P60981-2 Destrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.34529.34529.2 18.97 15.85 99 1 1 1 0 864.435 1647.8977 S155s TMT10 152 (K) LGGsLIVAFEGCPV (-) LGGS(1.0)LIVAFEGCPV C:Carbamidomethylation,s:Phosphorylated S DSTN 18961.8 3 4 2609.1 76.79 HUMAN 1 3.4572 5.975 IAELNRQSMEARGKL-p Q8N0Z3;S738-p IAELNRQSMEARGKL 0.923699174207081 0.0302764161988639 -0.0156666666666667 -0.330666666666667 0.678707920340311 20.5453319070717 -0.0156666666666667 -0.330666666666667 0.855321143626422 0.00881996393491394 -0.191223025053501 -3.99310697297379 Q8N0Z3 SPICE1 Q8N0Z3.S738.p_SPICE1 Q8N0Z3_S738s _1_1_738_738 Q8N0Z3 Q8N0Z3 Spindle and centriole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10728.10728.3 9.57 4.04 99 1 1 1 0 576.2888 1646.8846 S738s TMT10 731 (R) IAELNRQsMEAR (G) IAELNRQS(1.0)MEAR s:Phosphorylated S SPICE1 96605.1 1 9 556.1 273.19 HUMAN 1 -0.6787 -20.5453 IAEQNESSDEESLRK-p Q96KC8;S480-p IAEQNESSDEESLRK 0.546236180544102 0.0448652421118282 -0.111666666666667 -0.246 4.84776442274097 18.0423629601618 -0.111666666666667 -0.246 0.327509240376422 0.0156950861538985 -1.07608487205995 -3.46799621887304 Q96KC8 DNAJC1 Q96KC8.S480.p_DNAJC1 Q96KC8_S479sS480s_2_2_479_480 Q96KC8 Q96KC8 DnaJ homolog subfamily C member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19349.19349.2 14.22 14.22 3.584 3 2 2 0 1365.6055 2570.2622 S479s S480s TMT10 470 (K) DFDIAEQNEssDEESLRK (E) DFDIAEQNES(0.99)S(0.99)DEES(0.0)LRK K:TMT10,s:Phosphorylated S DNAJC1 64224 11 7 1670.1 122.29 HUMAN 1 -4.8478 -18.0424 IAGAPASSPEAPPAE-p Q9P2E9;S1277-p IAGAPASSPEAPPAE 0.666595970118167 0.631242031978969 -0.059 0.0526666666666667 3.29340126457463 2.71548759252224 -0.059 0.0526666666666667 0.468446365253968 0.535120071222756 -0.779400623172834 0.661919526511947 Q9P2E9 RRBP1 Q9P2E9.S1277.p_RRBP1 Q9P2E9_S1276sS1277s_2_2_1276_1277 Q9P2E9 Q9P2E9|A0A0A0MRV0|Q9P2E9-2|Q9P2E9-3|A0A087WVV2|F8W7S5|A0A087WU26 Ribosome-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19732.19732.4 15.39 15.39 10.647 3 2 2 0 883.4193 3370.7167 S1276s S1277s TMT10 1263 (K) SHVEDGDIAGAPAssPEAPPAEQDPVQLK (T) S(0.0)HVEDGDIAGAPAS(0.99)S(0.99)PEAPPAEQDPVQLK K:TMT10,s:Phosphorylated S RRBP1 152868.9 1 20 479.1 299.08 HUMAN 1 -3.2934 2.7155 IAGPGLGSGVRARVL-p O75369-8;S1433-p IAGPGLGSGVRARVL 0.708516237917609 0.0632464475280635 -0.078 -0.242333333333333 2.81241749987161 15.9638907485336 -0.078 -0.242333333333333 0.523309055552495 0.0253285848167862 -0.682047666120768 -3.05910448842468 O75369 FLNB O75369.8.S1433.p_FLNB O75369-8_S1433s _1_1_1433_1433 O75369-8 O75369-8|O75369-9|O75369-2 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15218.15218.2 10.23 8.64 99 1 1 1 0 646.85 1212.7262 S1433s TMT10 1426 (K) IAGPGLGsGVR (A) IAGPGLGS(1.0)GVR s:Phosphorylated S FLNB 283797.6 1 23 67.1 680.07 HUMAN 1 -2.8124 -15.9639 IAGVMTLSQVKGFVR-p P25445;S243-p IAGVMTLSQVKGFVR 0.203447734766775 0.0196240111735585 -0.36 0.448 13.4107070756563 23.4386855469002 -0.36 0.448 0.0455962674539718 0.00453034676447913 -2.58534423659425 4.65356379978491 P25445 FAS P25445.S243.p_FAS P25445_S243s _1_1_243_243 P25445 P25445 Tumor necrosis factor receptor superfamily member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32537.32537.3 18.54 18.54 1.669 5 1 1 0 721.7355 2083.2237 S243s TMT10 232 (K) YITTIAGVMTLsQVK (G) Y(0.0)IT(0.0)T(0.0)IAGVMT(0.0)LS(0.99)QVK K:TMT10,s:Phosphorylated S FAS 38929.7 1 3 2875.1 67.59 HUMAN 1 -13.4107 23.4387 IAHELGRSVTDVTTK-p Q96KC8;S363-p IAHELGRSVTDVTTK 0.414425294372075 0.050454433623152 -0.12 -0.247 7.05943843427572 17.3287222038853 -0.12 -0.247 0.196814076425953 0.0184981279718253 -1.47141363792719 -3.32506735720068 Q96KC8 DNAJC1 Q96KC8.S363.p_DNAJC1 Q96KC8_S363s _1_1_363_363 Q96KC8 Q96KC8 DnaJ homolog subfamily C member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13358.13358.3 18.06 18.06 1.111 4 1 1 0 722.3976 2085.2068 S363s TMT10 356 (K) IAHELGRsVTDVTTK (A) IAHELGRS(0.99)VT(0.0)DVT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S DNAJC1 64224 2 2 1670.1 122.29 HUMAN 1 -7.0594 -17.3287 IAIEDPYSVKRNVAR-p Q5VYS8;S600-p IAIEDPYSVKRNVAR 0.677572033046536 0.473349491362873 0.0663333333333333 0.0883333333333334 3.16524346177661 4.33034842783869 0.0663333333333333 0.0883333333333334 0.482475932112973 0.368947997247656 0.753779842282112 0.979596253784709 Q5VYS8 ZCCHC6 Q5VYS8.S600.p_ZCCHC6 Q5VYS8_S600s _1_1_600_600 Q5VYS8 Q5VYS8|Q5VYS8-6|Q5VYS8-4 Terminal uridylyltransferase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22647.22647.3 12.04 12.04 4.57 2 1 1 0 558.3044 1592.93 S600s TMT10 593 (R) IAIEDPYsVK (R) IAIEDPY(0.0)S(0.99)VK K:TMT10,s:Phosphorylated S ZCCHC6 173394.2 2 2 2208.1 93.42 HUMAN 1 3.1652 4.3303 IAISPLKSPNKAVKS-p Q6MZP7;S314-p IAISPLKSPNKAVKS 0.145152146047681 0.0119359897334166 -0.281666666666667 -0.522 17.1026217747741 26.8699600673641 -0.281666666666667 -0.522 0.0194866786119216 0.00205590949963397 -3.282874443081 -5.5259315662839 Q6MZP7 LIN54 Q6MZP7.S314.p_LIN54 Q6MZP7_S314s _1_1_314_314 Q6MZP7 Q6MZP7|Q6MZP7-3 Protein lin-54 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19411.19411.4 13.29 13.29 1.492 2 1 1 0 484.5469 1855.1984 S314s TMT10 307 (K) IAISPLKsPNK (A) IAIS(0.0)PLKS(0.99)PNK K:TMT10,s:Phosphorylated S LIN54 80862.1 3 7 2171.1 94.63 HUMAN 1 -17.1026 -26.87 IAKPIPQTPESAGNK-p P52948;T670-p IAKPIPQTPESAGNK 0.473587306301374 0.0382426589262153 -0.114666666666667 -0.306333333333333 5.97734328543079 19.0425949069898 -0.114666666666667 -0.306333333333333 0.252502493649951 0.0124663842593967 -1.28052640940489 -3.67319762381766 P52948 NUP98 P52948.T670.p_NUP98 P52948_T670t _1_1_670_670 P52948 P52948|P52948-5|P52948-2|P52948-6|P52948-3|P52948-4 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26907.26907.5 24.2 24.2 2 8 1 1 0 1177.0029 5800.9905 T670t TMT10 634 (R) FSFLSKPVDENHQQDGDEDSLVSHFYTNPIAKPIPQtPESAGNK (H) FS(0.0)FLS(0.0)KPVDENHQQDGDEDS(0.0)LVS(0.0)HFY(0.0)T(0.0)NPIAKPIPQT(0.99)PES(0.0)AGNK K:TMT10,t:Phosphorylated T NUP98 198716.8 2 8 187.1 472.84 HUMAN 1 -5.9773 -19.0426 IALQNGLSEDEALQR-p Q8WV99;S197-p IALQNGLSEDEALQR 0.34074134644007 0.473023876915477 0.323 0.0776666666666667 8.69317753190156 4.33477196859538 0.323 0.0776666666666667 0.135108367602673 0.368572393669669 1.75525134633059 0.98042826107696 Q8WV99 ZFAND2B Q8WV99.S197.p_ZFAND2B Q8WV99_S197s _1_1_197_197 Q8WV99 Q8WV99|E9PFU9|A0A087X0D9 AN1-type zinc finger protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30057.30057.3 16.45 16.45 8.06 4 1 1 0 963.4835 2808.4729 S197s TMT10 181 (R) SPSWTAPPVIALQNGLsEDEALQR (A) S(0.0)PS(0.0)WT(0.0)APPVIALQNGLS(0.99)EDEALQR s:Phosphorylated S ZFAND2B 29106.1 1 4 3053.1 62.05 HUMAN 1 8.6932 4.3348 IAPAPGFSPSAAKVT-p Q13118;S351-p IAPAPGFSPSAAKVT 0.180662139186649 0.00924283648152652 -0.211333333333333 -0.502 14.6581593149098 28.7372573689381 -0.211333333333333 -0.502 0.0342124415545289 0.00133743986209446 -2.81458115277246 -6.04788448819447 Q13118 KLF10 Q13118.S351.p_KLF10 Q13118_S351s _1_1_351_351 Q13118 Q13118|Q13118-2 Krueppel-like factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24818.24818.3 16.71 16.71 4.046 3 1 1 0 683.7131 1969.1523 S351s TMT10 341 (R) LSPIAPAPGFsPSAAK (V) LS(0.0)PIAPAPGFS(0.99)PS(0.0)AAK K:TMT10,s:Phosphorylated S KLF10 53410.1 2 4 2790.1 70.55 HUMAN 1 -14.6582 -28.7373 IAQATDRSDPLMDTL-p Q8N806;S354-p IAQATDRSDPLMDTL 0.130972992482068 0.00971111834999003 0.384666666666667 -0.505666666666667 18.2644556028909 28.3415843958092 0.384666666666667 -0.505666666666667 0.0149126367672102 0.00146501327640409 3.51598507706296 -5.93426325974351 Q8N806 UBR7 Q8N806.S354.p_UBR7 Q8N806_S354s _1_1_354_354 Q8N806 Q8N806|E9PCJ7 Putative E3 ubiquitin-protein ligase UBR7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23998.23998.3 15.75 10.29 1.117 5 1 1 0 844.3993 2451.2169 S354s TMT10 347 (K) IAQATDRsDPLMDTLSSMNR (V) IAQAT(0.0)DRS(0.99)DPLMDT(0.0)LS(0.0)S(0.0)MNR s:Phosphorylated S UBR7 49367.3 2 6 1053.1 182.86 HUMAN 1 18.2645 -28.3416 IAQGKRKSNEMITNL-p Q7Z2T5;S612-p IAQGKRKSNEMITNL 0.82783001131982 0.0165705183711879 -0.033 -0.375333333333333 1.57812692690393 24.5910081299253 -0.033 -0.375333333333333 0.695324139985603 0.00347455497065135 -0.413206791668407 -4.93490351472622 Q7Z2T5 TRMT1L Q7Z2T5.S612.p_TRMT1L Q7Z2T5_S612s _1_1_612_612 Q7Z2T5 Q7Z2T5 TRMT1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11654.11654.5 11.05 11.05 6.065 2 1 1 0 503.8981 2435.4938 S612s TMT10 610 (K) RKsNEMITNLGKK (Q) RKS(0.99)NEMIT(0.0)NLGKK K:TMT10,s:Phosphorylated S TRMT1L 82944 2 3 2872.1 67.63 HUMAN 1 -1.5781 -24.591 IAQWSPHTPPRHNFN-p P40189;T670-p IAQWSPHTPPRHNFN 0.875177773892579 0.8730378274028 -0.0356666666666667 -0.0163333333333333 1.13424333850247 0.831223073420389 -0.0356666666666667 -0.0163333333333333 0.770150614275976 0.825805350994142 -0.307221064108545 -0.230967422391817 P40189 IL6ST P40189.T670.p_IL6ST P40189_S667sT670t_2_2_667_670 P40189 P40189 Interleukin-6 receptor subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9363.9363.4 8.43 8.43 8.432 4 2 2 0 715.596 2699.4319 S667s T670t TMT10 661 (K) SHIAQWsPHtPPRHNFNSK (D) S(0.0)HIAQWS(0.99)PHT(0.99)PPRHNFNS(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T IL6ST 104561.7 1 4 2726.1 72.62 HUMAN 1 -1.1342 -0.8312 IARARAGSRLSAEER-p Q86Y82;S139-p IARARAGSRLSAEER 0.5493736861152 0.919335263092578 0.136333333333333 0.016 4.80243487165412 0.514930906730486 0.136333333333333 0.016 0.330945524878901 0.888192106733289 1.06772571485406 0.147334018356389 Q86Y82 STX12 Q86Y82.S139.p_STX12 Q86Y82_S139s _1_1_139_139 Q86Y82 Q86Y82 Syntaxin-12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3168.3168.2 9.24 6.29 3.787 2 1 1 0 578.2615 1075.5491 S139s Hydrogen 137 (R) AGsRLSAEER (Q) AGS(0.99)RLS(0.0)AEER s:Phosphorylated S STX12 31755.5 2 2 4912.1 25.15 HUMAN 1 4.8024 0.5149 IARFGHGSAKLARQA-p Q9UG63-2;S349-p IARFGHGSAKLARQA 0.0739261060777586 0.0180925584293059 0.571333333333333 -0.396 24.2848946436026 23.9936974913248 0.571333333333333 -0.396 0.00372829729386832 0.00398685325578155 4.86491289964737 -4.78767914165575 Q9UG63 ABCF2 Q9UG63.2.S349.p_ABCF2 Q9UG63-2_S349s _1_1_349_349 Q9UG63-2 Q9UG63-2 Isoform 2 of ATP-binding cassette sub-family F member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6187.6187.3 9.77 9.77 99 1 1 1 0 414.5526 1161.6781 S349s TMT10 345 (R) FGHGsAK (L) FGHGS(1.0)AK K:TMT10,s:Phosphorylated S ABCF2 73070 1 2 3726.1 44.44 HUMAN 1 24.2849 -23.9937 IARNFYDSPEKIYER-p O43674;S128-p IARNFYDSPEKIYER 0.210690030452455 0.038201169026373 0.304333333333333 -0.370666666666667 13.0563587914656 19.048972820289 0.304333333333333 -0.370666666666667 0.0494725300367511 0.0124480899528279 2.52122745265003 -3.67452517536724 O43674 NDUFB5 O43674.S128.p_NDUFB5 O43674_S128s _1_1_128_128 O43674 O43674|E7EWP0|O43674-2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16431.16431.3 7.41 7.41 7.408 3 1 1 0 700.346 2019.0588 S128s TMT10 124 (R) NFYDsPEKIYER (T) NFY(0.0)DS(0.99)PEKIY(0.0)ER K:TMT10,s:Phosphorylated S NDUFB5 21749.9 1 2 4798.1 26.48 HUMAN 1 13.0564 -19.049 IASLRAQSPPVKYVI-p Q9BVG8-6;S273-p IASLRAQSPPVKYVI 0.469306532717932 0.0611592109714098 -0.127 -0.25 6.06556700833714 16.1593116211737 -0.127 -0.25 0.247424840609862 0.0242141282255908 -1.29623539538745 -3.09662471868728 Q9BVG8 KIFC3 Q9BVG8.6.S273.p_KIFC3 Q9BVG8-6_S273s _1_1_273_273 Q9BVG8-6 Q9BVG8-6|Q9BVG8-2|F5H3M2|Q9BVG8-5|B7Z896|Q9BVG8-4|A0A0C4DGM9 Isoform 5 of Kinesin-like protein KIFC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8000.8000.2 8.62 5.2 99 1 1 1 0 632.8572 1184.7403 S273s TMT10 271 (R) AQsPPVK (Y) AQS(1.0)PPVK K:TMT10,s:Phosphorylated S KIFC3 95130.6 1 1 3584.1 47.69 HUMAN 1 -6.0656 -16.1593 IASNSELTPSESLAT-p E7ETA6;T1460-p IASNSELTPSESLAT 0.59002623755122 0.0674551305677737 -0.096 -0.238333333333333 4.22247622720206 15.5775571196529 -0.096 -0.238333333333333 0.378226868709769 0.0276849847126133 -0.95942434741083 -2.98544984866639 E7ETA6 PCM1 E7ETA6.T1460.p_PCM1 E7ETA6_T1460t _1_1_1460_1460 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26141.26141.3 25.86 25.86 1.265 11 1 1 0 1252.2561 3674.7961 T1460t TMT10 1446 (K) SVNSGTWIASNSELtPSESLATTDDETFEK (N) S(0.0)VNS(0.0)GT(0.0)WIAS(0.0)NS(0.0)ELT(0.99)PS(0.0)ES(0.0)LAT(0.0)T(0.0)DDET(0.0)FEK K:TMT10,t:Phosphorylated T PCM1 229381.8 6 44 13.1 1159.95 HUMAN 1 -4.2225 -15.5776 IATEHIPSPAKKVPR-p Q01581;S495-p IATEHIPSPAKKVPR 0.332654117108179 0.00526062627901912 -0.133 -0.596333333333333 8.92420589355237 33.1234593696156 -0.133 -0.596333333333333 0.128108932000507 0.000487140304255459 -1.7952424626553 -7.42826640698309 Q01581 HMGCS1 Q01581.S495.p_HMGCS1 Q01581_S495s _1_1_495_495 Q01581 Q01581 Hydroxymethylglutaryl-CoA synthase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18677.18677.4 30.14 30.14 7.842 5 1 1 0 930.478 3638.9179 S495s TMT10 469 (R) RPTPNDDTLDEGVGLVHSNIATEHIPsPAK (K) RPT(0.0)PNDDT(0.0)LDEGVGLVHS(0.0)NIAT(0.0)EHIPS(0.99)PAK K:TMT10,s:Phosphorylated S HMGCS1 57863.1 8 2 2182.1 94.24 HUMAN 1 -8.9242 -33.1235 IATQSQITPPGTPSS-p Q8N0Z3;T235-p IATQSQITPPGTPSS 0.24333175644278 0.37466895076327 0.181333333333333 -0.0976666666666666 11.7355914017676 5.65963257363206 0.181333333333333 -0.0976666666666666 0.0670564966106287 0.271666909760225 2.28552180508387 -1.22340811980315 Q8N0Z3 SPICE1 Q8N0Z3.T235.p_SPICE1 Q8N0Z3_T235t _1_1_235_235 Q8N0Z3 Q8N0Z3 Spindle and centriole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16600.16808.3 27.19 27.19 4.176 8 1 1 0 874.7725 2542.331 T235t TMT10 228 (K) IATQSQItPPGTPSSALSSGEQR (A) IAT(0.0)QS(0.0)QIT(0.99)PPGT(0.0)PS(0.0)S(0.0)ALS(0.0)S(0.0)GEQR t:Phosphorylated T SPICE1 96605.1 4 3 556.1 273.19 HUMAN 1 11.7356 -5.6596 IAVPDVYSACKRFEE-p Q04760;S137-p IAVPDVYSACKRFEE 0.351336572342019 0.125067811400219 -0.13 0.161666666666667 8.44239504774925 11.9062400976048 -0.13 0.161666666666667 0.143139829385848 0.0644727196227275 -1.71183126749192 2.31457090665258 Q04760 GLO1 Q04760.S137.p_GLO1 Q04760_S137s _1_1_137_137 Q04760 Q04760|Q04760-2 Lactoylglutathione lyase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24676.24676.3 24.31 21.03 4.367 2 1 1 0 777.0661 2249.2153 S137s TMT10 124 (R) GFGHIGIAVPDVYsACK (R) GFGHIGIAVPDVY(0.0)S(0.99)ACK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GLO1 21005.6 1 1 4976.1 24.31 HUMAN 1 -8.4424 11.9062 IAYEDEGSG______-p Q9BQC3;S488-p IAYEDEGSG______ 0.654253083415848 0.0957805260467767 0.0796666666666666 0.197333333333333 3.45410738781449 13.4695691605221 0.0796666666666667 0.197333333333333 0.45142879866796 0.044982447727241 0.811229326352756 2.59454962763581 Q9BQC3 DPH2 Q9BQC3.S488.p_DPH2 Q9BQC3_S488s _1_1_488_488 Q9BQC3 Q9BQC3|Q9BQC3-3 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14380.14380.2 15.46 15.46 15.463 2 1 1 0 823.8852 1566.7961 S488s TMT10 477 (R) RGIAIAYEDEGsG (-) RGIAIAY(0.0)EDEGS(0.99)G s:Phosphorylated S DPH2 52709.2 2 1 4485.1 30.8 HUMAN 1 3.4541 13.4696 ICPGPVQSNIVENSL-p Q9Y394;S239-p ICPGPVQSNIVENSL 0.820904102287946 0.154086214603705 0.0413333333333333 -0.156666666666667 1.64988608321743 10.6814176190733 0.0413333333333333 -0.156666666666667 0.683929586730228 0.0854787648536095 0.429790810402674 -2.09947043042007 Q9Y394 DHRS7 Q9Y394.S239.p_DHRS7 Q9Y394_S239s _1_1_239_239 Q9Y394 A0A087X0Z7|Q9Y394|Q9Y394-2 Dehydrogenase/reductase SDR family member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.35604.35604.4 18.17 18.17 1.32 7 1 1 0 1028.037 4029.1619 S239s TMT10 219 (R) TELATYPGIIVSNICPGPVQsNIVENSLAGEVTK (T) T(0.0)ELAT(0.0)Y(0.0)PGIIVS(0.0)NICPGPVQS(0.99)NIVENS(0.0)LAGEVT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DHRS7 38697.5 2 2 4262.1 34.53 HUMAN 1 1.6499 -10.6814 ICPSLPYSPVSSPQS-p Q96RR4-3;S129-p ICPSLPYSPVSSPQS 0.78030934257184 0.643929908189732 0.06 -0.0606666666666666 2.07183389668051 2.60545942893064 0.06 -0.0606666666666666 0.620606915013346 0.548850491058051 0.524652050862129 -0.638987472313644 Q96RR4 CAMKK2 Q96RR4.3.S129.p_CAMKK2 Q96RR4-3_S129s _1_1_129_129 Q96RR4-3 Q96RR4|Q96RR4-7|Q96RR4-4|Q96RR4-3|Q96RR4-2|Q96RR4-5|Q96RR4-6 Isoform 3 of Calcium/calmodulin-dependent protein kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19488.19488.3 19.54 19.54 2.873 7 1 1 0 810.0454 2348.1576 S129s TMT10 121 (R) CICPSLPYsPVSSPQSSPR (L) CICPS(0.0)LPY(0.0)S(0.99)PVS(0.0)S(0.0)PQS(0.0)S(0.0)PR C:Carbamidomethylation,s:Phosphorylated S CAMKK2 60285.4 2 9 1793.1 114.32 HUMAN 1 2.0718 -2.6055 ICQKRRFSDSEERHT-p O75113;S288-p ICQKRRFSDSEERHT 0.646466566739135 0.723300301587276 0.109 0.0806666666666667 3.54742907132148 1.9362914364207 0.109 0.0806666666666667 0.441831924820977 0.640281356488532 0.829567402252814 0.494589879885302 O75113 N4BP1 O75113.S288.p_N4BP1 O75113_S288s _1_1_288_288 O75113 O75113 NEDD4-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3759.3759.4 11.91 11.91 1.181 3 1 1 0 425.9544 1620.8291 S288s Hydrogen 286 (R) RFsDSEERHTK (K) RFS(0.99)DS(0.0)EERHT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S N4BP1 101289.8 9 5 889.1 205.17 HUMAN 1 3.5474 1.9363 ICSDKTGTLTTNQMS-p P16615;T355-p ICSDKTGTLTTNQMS 0.367137725804172 0.196032393319514 -0.123666666666667 0.141 8.07658877714702 9.3089064672303 -0.123666666666667 0.141 0.155718826528043 0.117249055590664 -1.64844416737733 1.86115546553574 P16615 ATP2A2 P16615.T355.p_ATP2A2 P16615_T355t _1_1_355_355 P16615 Q93084-5|Q93084-6|P16615|Q93084-7|Q93084-3|P16615-4|P16615-3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11456.11456.2 8.32 2.79 2.475 5 1 1 0 889.412 1697.8512 T355t TMT10 353 (K) TGtLTTNQMSVCR (M) T(0.0)GT(0.99)LT(0.0)T(0.0)NQMS(0.0)VCR C:Carbamidomethylation,t:Phosphorylated T ATP2A2 116409.4 1 4 1240.1 162.94 HUMAN 1 -8.0766 9.3089 ICTEQSNSPPPIRRQ-p Q15678;S314-p ICTEQSNSPPPIRRQ 0.533924512875369 0.0369134635389509 0.0916666666666667 0.300666666666667 5.04676556733276 19.2666554207489 0.0916666666666667 0.300666666666667 0.31284083995498 0.0118395298803402 1.11262128860948 3.71998507140379 Q15678 PTPN14 Q15678.S314.p_PTPN14 Q15678_S314s _1_1_314_314 Q15678 Q15678 Tyrosine-protein phosphatase non-receptor type 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8323.8743.3 18.92 15.06 2.187 3 1 1 0 655.3262 1883.9959 S314s TMT10 307 (K) ICTEQSNsPPPIRR (Q) ICT(0.0)EQS(0.0)NS(0.99)PPPIRR C:Carbamidomethylation,s:Phosphorylated S PTPN14 136114.4 13 1 337.1 355.06 HUMAN 1 5.0468 19.2667 ICTGQVPSAEDEPAP-p Q9BTC0;S862-p ICTGQVPSAEDEPAP 0.569831420428676 0.55241036559434 0.0816666666666667 -0.059 4.49357794558368 3.47105027748703 0.0816666666666667 -0.059 0.355338451504001 0.449671095385796 1.01037770133101 -0.814441356197503 Q9BTC0 DIDO1 Q9BTC0.S862.p_DIDO1 Q9BTC0_S862s _1_1_862_862 Q9BTC0 Q9BTC0|Q9BTC0-1 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14145.14181.4 16.87 16.87 6.061 2 1 1 0 649.3443 2514.3841 S862s TMT10 855 (K) ICTGQVPsAEDEPAPKK (Q) ICT(0.0)GQVPS(0.99)AEDEPAPKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DIDO1 245579.9 4 8 153.1 505.54 HUMAN 1 4.4936 -3.4711 ICVVMLESPPKGVTI-p Q15366-4;S169-p ICVVMLESPPKGVTI 0.35478576387431 0.00274191631715344 -0.288666666666667 0.774333333333333 8.36352075904798 38.8198366100431 -0.288666666666667 0.774333333333333 0.14576321010746 0.000131224926743787 -1.69817047931362 9.61300493436385 Q15366 PCBP2 Q15366.4.S169.p_PCBP2 Q15366-4_S169s _1_1_169_169 Q15366-4 E9PFP8|P57721-5|Q15366-4|Q15366-7 Isoform 4 of Poly(rC)-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25740.25740.3 10.63 10.63 99 1 1 1 0 647.0113 1859.0535 S169s TMT10 161 (K) QICVVMLEsPPK (G) QICVVMLES(1.0)PPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCBP2 35258.8 1 9 1045.99 184.66 HUMAN 1 -8.3635 38.8198 IDAEYRFSPNSNKSN-p Q9NY74;S464-p IDAEYRFSPNSNKSN 0.52866103503659 0.0146478336176251 -0.0896666666666667 -0.410333333333333 5.1226079685721 25.4028483130167 -0.0896666666666667 -0.410333333333333 0.30742501517295 0.00288214063607023 -1.1264799137009 -5.13998428490675 Q9NY74 ETAA1 Q9NY74.S464.p_ETAA1 Q9NY74_S464s _1_1_464_464 Q9NY74 Q9NY74 Ewing's tumor-associated antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17584.17584.4 9.8 9.8 1.378 5 1 1 0 714.855 2776.4306 S464s TMT10 451 (K) TYDRELIDAEYRFsPNSNK (S) T(0.0)Y(0.0)DRELIDAEY(0.0)RFS(0.99)PNS(0.0)NK K:TMT10,s:Phosphorylated S ETAA1 104522.7 1 4 2527.1 79.86 HUMAN 1 -5.1226 -25.4028 IDASRLVYDGIRDIR-p P35221-2;Y619-p IDASRLVYDGIRDIR 0.611537267066762 0.129365549347562 -0.108 0.172333333333333 3.95819862185239 11.7058489249548 -0.108 0.172333333333333 0.401957501272743 0.0675173063534804 -0.909130775650477 2.27916189113605 P35221 CTNNA1 P35221.2.Y619.p_CTNNA1 P35221-2_Y619y _1_1_619_619 P35221-2 P35221-2|G3XAM7|P35221-3 Isoform 2 of Catenin alpha-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16857.16899.2 10 1.36 99 1 1 1 0 572.8046 1064.6302 Y619y TMT10 617 (R) LVyDGIR (D) LVY(1.0)DGIR y:Phosphorylated Y CTNNA1 103489.3 3 3 32.1 58.12 HUMAN 1 -3.9582 11.7058 IDDDFFPSSGEEAEA-p Q03468;S429-p IDDDFFPSSGEEAEA 0.627993569436905 0.199243039698926 0.0666666666666667 0.175 3.7534445605447 9.21879010030679 0.0666666666666667 0.175 0.421362171930166 0.119707397733771 0.869696827639647 1.84556166014918 Q03468 ERCC6 Q03468.S429.p_ERCC6 Q03468_S429sS430s_2_2_429_430 Q03468 Q03468|P0DP91 DNA excision repair protein ERCC-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23930.24356.4 27.74 23.33 8.203 3 2 2 0 1042.9983 4009.0394 S429s S430s TMT10 416 (K) KVPVQEIDDDFFPssGEEAEAASVGEGGGGGRK (V) KVPVQEIDDDFFPS(0.99)S(0.99)GEEAEAAS(0.0)VGEGGGGGRK K:TMT10,s:Phosphorylated S ERCC6 169554.2 12 13 403.1 327.23 HUMAN 1 3.7534 9.2188 IDDSEMESPVDDVFY-p Q14938;S288-p IDDSEMESPVDDVFY 0.241962758828852 0.0300001465061648 0.227666666666667 0.472666666666667 11.7837199793427 20.6075561379875 0.227666666666667 0.472666666666667 0.0663174780117636 0.00869449548325495 2.29403029153686 4.00667327912212 Q14938 NFIX Q14938.S288.p_NFIX Q14938_S288s _1_1_288_288 Q14938 Q14938|Q14938-4|Q14938-2|K7EN08|Q14938-3|Q14938-5|Q14938-6|C9JWJ8 Nuclear factor 1 X-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25901.25901.3 10.35 10.35 3.674 5 1 1 0 875.7109 2545.1602 S288s TMT10 280 (K) SIDDSEMEsPVDDVFYPGTGR (S) S(0.0)IDDS(0.0)EMES(0.99)PVDDVFY(0.0)PGT(0.0)GR s:Phosphorylated S NFIX 55610.7 1 4 1219.1 165.13 HUMAN 1 11.7837 20.6076 IDDTPRGSWACSIFD-p Q96N67-6;S190-p IDDTPRGSWACSIFD 0.205247820557502 0.231869998976358 -0.364 -0.258 13.2990657920956 8.36069272695517 -0.364 -0.258 0.0467835766297417 0.145858158880202 -2.56509923613753 -1.69711691315292 Q96N67 DOCK7 Q96N67.6.S190.p_DOCK7 Q96N67-6_S190s _1_1_190_190 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30428.30428.3 18.49 15.23 2.236 5 1 1 0 942.1222 2744.3788 S190s TMT10 180 (R) SMSIDDTPRGsWACSIFDLK (N) S(0.0)MS(0.0)IDDT(0.0)PRGS(0.99)WACS(0.0)IFDLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DOCK7 243551.1 1 6 345.1 352.4 HUMAN 1 -13.2991 -8.3607 IDDYKVTSQVLGLGI-p P49137;S67-p IDDYKVTSQVLGLGI 0.210938152318629 0.0277238968700976 -0.246 -0.292333333333333 13.0474008972711 21.1045179112471 -0.246 -0.292333333333333 0.0495746789403969 0.00775440016330398 -2.51961182954863 -4.11597825908551 P49137 MAPKAPK2 P49137.S67.p_MAPKAPK2 P49137_S67s _1_1_67_67 P49137 P49137|P49137-2 MAP kinase-activated protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28674.28674.4 15.17 15.17 2.377 3 1 1 0 747.1703 2905.6966 S67s TMT10 57 (K) NAIIDDYKVTsQVLGLGINGK (V) NAIIDDY(0.0)KVT(0.0)S(0.99)QVLGLGINGK K:TMT10,s:Phosphorylated S MAPKAPK2 45966.4 2 1 5934.1 15.17 HUMAN 1 -13.0474 -21.1045 IDEDDEKSLREKTVT-p Q8IXS6-2;S350-p IDEDDEKSLREKTVT 0.784610264714199 0.010206222863484 0.067 0.496 2.02789464451882 27.9656731662214 0.067 0.496 0.626917705685837 0.00159746989843787 0.514970685173213 5.8278497706316 Q8IXS6 PALM2 Q8IXS6.2.S350.p_PALM2 Q8IXS6-2_S350s _1_1_350_350 Q8IXS6-2 B1ALY0|Q8IXS6-2|C9JA33 Isoform 2 of Paralemmin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28885.28885.5 21.6 21.6 10.194 3 1 1 0 804.2438 3937.2191 S350s TMT10 329 (K) VLGYDETIKAELVLIDEDDEKsLREK (T) VLGY(0.0)DET(0.0)IKAELVLIDEDDEKS(0.99)LREK K:TMT10,s:Phosphorylated S PALM2 45722.2 3 3 779.2 226.39 HUMAN 1 2.0279 27.9657 IDEKLGLSYKRERPS-p Q03468;S1154-p IDEKLGLSYKRERPS 0.213516296888393 0.702273760541802 -0.394 -0.1 12.9252266190184 2.10977155318949 -0.394 -0.1 0.0509890990280663 0.615209232985348 -2.49760185076773 -0.532913660184725 Q03468 ERCC6 Q03468.S1154.p_ERCC6 Q03468_S1154s _1_1_1154_1154 Q03468 Q03468 DNA excision repair protein ERCC-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13395.13395.2 8.31 8.31 8.313 2 1 1 0 687.8991 1294.8247 S1154s TMT10 1151 (K) LGLsYKR (E) LGLS(0.99)Y(0.0)KR K:TMT10,s:Phosphorylated S ERCC6 169554.2 1 10 403.1 327.23 HUMAN 1 -12.9252 -2.1098 IDEKNWPSDEMPDFP-p Q07960;S35-p IDEKNWPSDEMPDFP 0.276989082993004 0.441812541002729 -0.261666666666667 0.0843333333333334 10.5465859778468 4.723115006916 -0.261666666666667 0.0843333333333334 0.0881741744568755 0.337045473765909 -2.07685211898623 1.05286124734647 Q07960 ARHGAP1 Q07960.S35.p_ARHGAP1 Q07960_S35s _1_1_35_35 Q07960 Q07960 Rho GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21187.21187.3 17.36 17.36 8.862 3 1 1 0 921.4377 2682.3324 S35s TMT10 32 (K) NWPsDEMPDFPKSDDSK (S) NWPS(0.99)DEMPDFPKS(0.0)DDS(0.0)K K:TMT10,s:Phosphorylated S ARHGAP1 50491.8 6 3 951.1 196.28 HUMAN 1 -10.5466 4.7231 IDELPFKSPITKSWS-p Q9UQC2;S543-p IDELPFKSPITKSWS 0.0387693955698889 0.00272422972588299 -0.581333333333333 -1.215 32.034691594915 38.9164554306549 -0.581333333333333 -1.215 0.000625937311963919 0.000128337760610077 -7.0758773870851 -9.65451902663019 Q9UQC2 GAB2 Q9UQC2.S543.p_GAB2 Q9UQC2_S543s _1_1_543_543 Q9UQC2 Q9UQC2|Q9UQC2-2 GRB2-associated-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25643.25643.4 19.56 19.56 2.3 3 1 1 0 646.6186 2503.4739 S543s TMT10 532 (R) NNTVIDELPFKsPITK (S) NNT(0.0)VIDELPFKS(0.99)PIT(0.0)K K:TMT10,s:Phosphorylated S GAB2 74969.7 2 13 698.1 241.06 HUMAN 1 -32.0347 -38.9165 IDENCLLSPLAGEDD-p P04150-3;S226-p IDENCLLSPLAGEDD 0.327965536734126 0.376219046156225 -0.153 0.0983333333333333 9.05538683792954 5.63723537320112 -0.153 0.0983333333333333 0.124297191601798 0.273071554538713 -1.81795117373076 1.21938569807467 P04150 NR3C1 P04150.3.S226.p_NR3C1 P04150-3_S226s_1_1_226_226 P04150-3 P04150-3|P04150-12|P04150-13|P04150-5|P04150-7 Isoform Alpha-2 of Glucocorticoid receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.35224.35224.5 17.66 17.66 5.422 5 1 1 0 1137.384 5601.9366 N222n S226s TMT10 215 (R) SDLLIDEnCLLsPLAGEDDSFLLEGNSNEDCKPLILPDTKPK (I) S(0.0)DLLIDEN(0.99)CLLS(0.99)PLAGEDDS(0.0)FLLEGN(0.0)S(0.0)N(0.0)EDCKPLILPDT(0.0)KPK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S NR3C1 86955.1 1 4 2865.1 67.86 HUMAN 1 -9.0554 5.6372 IDENMEPSPTGDFYP-p Q5VW30;S284-p IDENMEPSPTGDFYP 0.287218129279298 0.0370584982712401 0.166333333333333 0.279 10.2139228597645 19.2409184192349 0.166333333333333 0.279 0.0951935918654133 0.0119099011813587 2.01890190187684 3.71459503592776 Q5VW30 NFIB Q5VW30.S284.p_NFIB Q5VW30_S284s _1_1_284_284 Q5VW30 Q5VW26|A0A1B0GWJ4|A0A1B0GVN4|O00712|U3KQE8|A0A1B0GW37|O00712-6|Q5VW30|O00712-5|Q5VW27|A0A1B0GU97|O00712-4|A0A0A0MRX8|A0A1B0GWB8|Q5VW31 Nuclear factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23681.23681.3 21.26 21.34 1.14 9 1 1 0 1073.8187 3139.4727 S284s TMT10 274 (K) TISIDENMEPsPTGDFYPSPSSPAAGSR (T) T(0.0)IS(0.0)IDENMEPS(0.99)PT(0.0)GDFY(0.0)PS(0.0)PS(0.0)S(0.0)PAAGS(0.0)R s:Phosphorylated S NFIB 63015.1 5 7 655.1 253.73 HUMAN 1 10.2139 19.2409 IDEPLEGSEDRIITI-p P61978-2;S430-p IDEPLEGSEDRIITI 0.227824784716705 0.0118666492276053 -0.237333333333333 0.466666666666667 12.3480954041117 26.9077330240147 -0.237333333333333 0.466666666666667 0.0582358554778476 0.00203810567190967 -2.39423357571973 5.53614002814448 P61978 HNRNPK P61978.2.S430.p_HNRNPK P61978-2_S430s _1_1_430_430 P61978-2 P61978-2|P61978-3 Isoform 2 of Heterogeneous nuclear ribonucleoprotein K HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.32390.32390.4 21.36 21.36 1.981 6 1 1 0 1092.8163 4288.2713 S430s TMT10 423 (K) IDEPLEGsEDRIITITGTQDQIQNAQYLLQNSVK (Q) IDEPLEGS(0.99)EDRIIT(0.0)IT(0.0)GT(0.0)QDQIQNAQY(0.0)LLQNS(0.0)VK K:TMT10,s:Phosphorylated S HNRNPK 51312.6 2 11 595.1 264.01 HUMAN 1 -12.3481 26.9077 IDFTRLPSPTPENKD-p Q5VWQ8;S702-p IDFTRLPSPTPENKD 0.246490628895716 0.185474039658637 -0.173666666666667 -0.167666666666667 11.6383633752818 9.62310404483953 -0.173666666666667 -0.167666666666667 0.0685746599155626 0.109066052702007 -2.26834965963807 -1.91555652317837 Q5VWQ8 DAB2IP Q5VWQ8.S702.p_DAB2IP Q5VWQ8_S702s _1_1_702_702 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.35310.35310.3 16.31 16.31 1.59 4 1 1 0 1075.5597 3144.7015 S702s TMT10 685 (K) MVIENDLSGLIDFTRLPsPTPENK (D) MVIENDLS(0.0)GLIDFT(0.0)RLPS(0.99)PT(0.0)PENK K:TMT10,s:Phosphorylated S DAB2IP 132592.9 16 7 281.1 388.28 HUMAN 1 -11.6384 -9.6231 IDGATQSSPAEPKSE-p Q32MZ4-2;S690-p IDGATQSSPAEPKSE 0.427582140722397 0.0138319957403419 -0.153 -0.437 6.79436902194542 25.8143532702564 -0.153 -0.437 0.209200682865094 0.00262158940362493 -1.42496838143188 -5.24620088506143 Q32MZ4 LRRFIP1 Q32MZ4.2.S690.p_LRRFIP1 Q32MZ4-2_S690s _1_1_690_690 Q32MZ4-2 Q32MZ4|Q32MZ4-2|Q32MZ4-3 Isoform 2 of Leucine-rich repeat flightless-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9546.9546.3 17.41 12.87 1.117 3 1 1 0 832.7693 2416.3287 S690s TMT10 679 (K) DNAKIDGATQSsPAEPK (S) DNAKIDGAT(0.0)QS(0.0)S(0.99)PAEPK K:TMT10,s:Phosphorylated S LRRFIP1 87029.9 8 15 235.1 419.93 HUMAN 1 -6.7944 -25.8144 IDGLPKNSPNNISGI-p Q9BWW4-2;S320-p IDGLPKNSPNNISGI 0.794385697846618 0.00911476743597548 -0.074 0.488333333333333 1.9305888040026 28.8582262022704 -0.074 0.488333333333333 0.641122649122637 0.00130070071738149 -0.493374968027837 6.08295711918962 Q9BWW4 SSBP3 Q9BWW4.2.S320.p_SSBP3 Q9BWW4-2_S320s _1_1_320_320 Q9BWW4-2 Q9BWW4|Q9BWW4-3|Q9BWW4-2|A0A087WVT6|Q9NW25 Isoform 2 of Single-stranded DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12035.12035.2 15.76 10.69 3.775 4 1 1 0 1015.9992 1951.0195 S320s TMT10 319 (K) NsPNNISGISNPPGTPR (D) NS(0.99)PNNIS(0.0)GIS(0.0)NPPGT(0.0)PR s:Phosphorylated S SSBP3 37867.8 3 2 2558.1 78.64 HUMAN 1 -1.9306 28.8582 IDGNVSCSENLVANT-p Q92576;S1632-p IDGNVSCSENLVANT 0.367698828943511 0.67383763927493 0.131666666666667 -0.0656666666666667 8.06186862472798 2.34339819563497 0.131666666666667 -0.0656666666666667 0.156247521686549 0.582988758358311 1.64589149962807 -0.583502902120927 Q92576 PHF3 Q92576.S1632.p_PHF3 Q92576_S1630sS1632s_2_2_1630_1632 Q92576 Q92576 PHD finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26626.26626.4 7.78 7.78 1.131 4 2 2 0 885.1833 3376.7684 S1630s S1632s N1634n TMT10 1623 (K) GNIDGNVsCsEnLVANTARSPQFINLK (R) GN(0.0)IDGN(0.0)VS(0.99)CS(0.99)EN(0.99)LVAN(0.0)T(0.0)ARS(0.0)PQFIN(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated PHF3 231702.4 1 23 96.1 606.54 HUMAN 1 8.0619 -2.3434 IDHNEGFSLI_____-p Q5GLZ8;S1055-p IDHNEGFSLI_____ 0.736579803240874 0.119469726003301 0.056 -0.265333333333333 2.51738307447727 12.1658435844067 0.056 -0.265333333333333 0.560094995921855 0.0607317284585425 0.620559042164308 -2.36058855221513 Q5GLZ8 HERC4 Q5GLZ8.S1055.p_HERC4 Q5GLZ8_S1055s _1_1_1055_1055 Q5GLZ8 Q5GLZ8|Q5GLZ8-2|Q5GLZ8-3|Q5GLZ8-6 Probable E3 ubiquitin-protein ligase HERC4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32932.32932.3 17.91 17.91 99 1 1 1 0 626.9904 1798.9901 S1055s TMT10 1044 (K) LIQAIDHNEGFsLI (-) LIQAIDHNEGFS(1.0)LI s:Phosphorylated S HERC4 119987 2 1 5588.1 17.91 HUMAN 1 2.5174 -12.1658 IDIEGVQSEGQDNGA-p P18887;S475-p IDIEGVQSEGQDNGA 0.35135159523803 0.812767301100662 0.127 0.0233333333333334 8.44176580822111 1.26043532740896 0.127 0.0233333333333334 0.143160570096987 0.748094509374824 1.71172229609337 0.337953244255696 P18887 XRCC1 P18887.S475.p_XRCC1 P18887_S475s_1_1_475_475 P18887 P18887|F5H8D7 DNA repair protein XRCC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21314.21314.3 9.77 9.77 1.98 4 1 1 0 1385.6199 4073.8857 S475s N480n TMT10 459 (K) AASPVLQEDIDIEGVQsEGQDnGAEDSGDTEDELRR (V) AAS(0.0)PVLQEDIDIEGVQS(0.99)EGQDN(1.0)GAEDS(0.0)GDT(0.0)EDELRR s:Phosphorylated S,n:Deamidated XRCC1 69817.6 6 11 433.1 315.31 HUMAN 1 8.4418 1.2604 IDLNLDISPQRPRPT-p O14733-2;S35-p IDLNLDISPQRPRPT 0.991883667014353 0.0131178954837293 -0.00166666666666667 -0.444666666666667 0.0746893827739644 26.2139742055448 -0.00166666666666667 -0.444666666666667 0.982949173231761 0.0023911266477479 -0.0223770561145758 -5.35085186758042 O14733 MAP2K7 O14733.2.S35.p_MAP2K7 O14733-2_S35s _1_1_35_35 O14733-2 O14733-2|O14733-4 Isoform 2 of Dual specificity mitogen-activated protein kinase kinase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26881.26881.5 17.38 17.38 2.355 3 1 1 0 653.9518 3185.7592 S35s TMT10 28 (R) IDLNLDIsPQRPRPTLQLPLANDGGSR (S) IDLNLDIS(0.99)PQRPRPT(0.0)LQLPLANDGGS(0.0)R s:Phosphorylated S MAP2K7 52336.2 3 1 2820.1 69.41 HUMAN 1 -0.0747 -26.214 IDNMLMGSGAFVKKI-p Q9UPY3;S1460-p IDNMLMGSGAFVKKI 0.517583404811616 0.162191003677492 0.190666666666667 -0.311666666666667 5.28222701496481 10.3863239625464 0.190666666666667 -0.311666666666667 0.296331144590672 0.0914887310035324 1.1555353170655 -2.04805086332161 Q9UPY3 DICER1 Q9UPY3.S1460.p_DICER1 Q9UPY3_S1460s _1_1_1460_1460 Q9UPY3 Q9UPY3|Q9UPY3-2|Q9UPY3-3 Endoribonuclease Dicer HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33470.33470.3 16.24 16.24 99 1 1 1 0 690.0187 1988.0749 S1460s TMT10 1452 (R) FIDNMLMGsGAFVK (K) FIDNMLMGS(1.0)GAFVK K:TMT10,s:Phosphorylated S DICER1 221416.1 4 6 942.1 197.99 HUMAN 1 5.2822 -10.3863 IDQDDCISHSEPKDV-p Q14966;S1656-p IDQDDCISHSEPKDV 0.843793693060357 0.0227263737399434 -0.0383333333333334 0.615 1.42863339287203 22.4403230930945 -0.0383333333333334 0.615 0.719675404737772 0.00570121856524943 -0.378190715787193 4.41855932587852 Q14966 ZNF638 Q14966.S1656.p_ZNF638 Q14966_S1656s _1_1_1656_1656 Q14966 Q14966|Q14966-3|Q14966-5 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28995.28995.3 19.71 19.71 1.347 5 1 1 0 1105.8529 3235.5829 S1656s TMT10 1638 (K) NSNSLFTLDELIDQDDCIsHSEPK (D) NS(0.0)NS(0.0)LFT(0.0)LDELIDQDDCIS(0.99)HS(0.0)EPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF638 222047.2 2 21 165.1 494.68 HUMAN 1 -1.4286 22.4403 IDQEEGIS_______-p Q99598;S290-p IDQEEGIS_______ 0.284284135198705 0.409108228991378 0.307666666666667 0.123333333333333 10.3056619077837 5.16675728631502 0.307666666666667 0.123333333333333 0.09320384076359 0.304315638811098 2.0348680216855 1.13429548203045 Q99598 TSNAX Q99598.S290.p_TSNAX Q99598_S290s _1_1_290_290 Q99598 Q99598 Translin-associated protein X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16745.16745.2 14.41 14.41 14.407 2 1 1 0 780.8381 1480.7039 S290s TMT10 280 (K) TEMIDQEEGIs (-) T(0.0)EMIDQEEGIS(0.99) s:Phosphorylated S TSNAX 33226 1 5 2150.1 95.73 HUMAN 1 10.3057 5.1668 IDQGDLMTPQFTPYY-p Q8IW41;T182-p IDQGDLMTPQFTPYY 0.666595970118167 0.674306889688338 0.066 -0.04 3.29399846532246 2.33919175638809 0.066 -0.04 0.468381953363546 0.583553696411377 0.779519506765796 -0.582601791598956 Q8IW41 MAPKAPK5 Q8IW41.T182.p_MAPKAPK5 Q8IW41_T182t _1_1_182_182 Q8IW41 Q8IW41|Q8IW41-2|F8VRP2 MAP kinase-activated protein kinase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32549.32549.3 20.74 20.74 1.101 4 1 1 0 1063.8563 3109.5866 T182t TMT10 175 (K) IDQGDLMtPQFTPYYVAPQVLEAQR (R) IDQGDLMT(0.99)PQFT(0.0)PY(0.0)Y(0.0)VAPQVLEAQR t:Phosphorylated T MAPKAPK5 54675.9 4 1 2819.1 69.46 HUMAN 1 3.294 -2.3392 IDRHMYHSLYLKVKG-p P84098;S122-p IDRHMYHSLYLKVKG 0.0519525792237636 0.0141675551185305 0.712 0.528 28.0912281334013 25.6413517055192 0.712 0.528 0.00155194807534799 0.00272812854329575 5.87175174081407 5.20135694109233 P84098 RPL19 P84098.S122.p_RPL19 P84098_S122s _1_1_122_122 P84098 P84098|J3KTE4|J3QR09 60S ribosomal protein L19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12754.12754.3 11.31 11.31 2.664 3 1 1 0 577.2994 1649.9238 S122s TMT10 118 (R) HMYHsLYLK (V) HMY(0.0)HS(0.99)LY(0.0)LK K:TMT10,s:Phosphorylated S RPL19 23579.7 1 2 4188.1 35.68 HUMAN 1 28.0912 25.6414 IDRKKANTQDLRKKE-p Q13464;T1024-p IDRKKANTQDLRKKE 0.357290119673935 0.450478103258599 0.18 0.135 8.3065014797117 4.61630944852319 0.18 0.135 0.147689578837784 0.345437160541136 1.68829299092171 1.03305544273639 Q13464 ROCK1 Q13464.T1024.p_ROCK1 Q13464_T1024t _1_1_1024_1024 Q13464 Q13464|A0A0U1RQV4 Rho-associated protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5079.5079.2 7.46 0.22 99 1 1 1 0 742.406 1403.8371 T1024t TMT10 1021 (K) KANtQDLR (K) KANT(1.0)QDLR K:TMT10,t:Phosphorylated T ROCK1 159198.9 1 2 2757.1 71.63 HUMAN 1 8.3065 4.6163 IDRLACLSEEGNEIE-p Q9Y2L1;S215-p IDRLACLSEEGNEIE 0.975009344981545 0.0426756038074705 -0.005 0.359333333333333 0.212680475095407 18.3520896052682 -0.005 0.359333333333333 0.952208277576434 0.0146147381801854 -0.0627631736806749 3.53091299355201 Q9Y2L1 DIS3 Q9Y2L1.S215.p_DIS3 Q9Y2L1_S215s _1_1_215_215 Q9Y2L1 Q9Y2L1|Q9Y2L1-2|G3V1J5|F2Z2C0 Exosome complex exonuclease RRP44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27531.27531.3 10.36 10.36 3.926 4 1 1 0 1128.5662 3303.7143 S215s TMT10 200 (K) SLTANPELIDRLACLsEEGNEIESGK (I) S(0.0)LT(0.0)ANPELIDRLACLS(0.99)EEGNEIES(0.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DIS3 110084.8 1 1 3526.1 49.02 HUMAN 1 -0.2127 18.3521 IDRRGKRSPGVFRPE-p Q92540-4;S851-p IDRRGKRSPGVFRPE 0.689296686018885 0.223850228934458 -0.08 -0.305 3.0322702117266 8.56253176617395 -0.08 -0.305 0.497476968093221 0.139234488395456 -0.726959154467616 -1.73204354472718 Q92540 SMG7 Q92540.4.S851.p_SMG7 Q92540-4_S851s _1_1_851_851 Q92540-4 Q92540-4|E9PD50|Q92540-5 Isoform 4 of Protein SMG7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13781.13781.3 12.53 6.28 99 1 1 1 0 630.6537 1809.9809 S851s TMT10 851 (R) sPGVFRPEQDPVPR (M) S(1.0)PGVFRPEQDPVPR s:Phosphorylated S SMG7 132446.2 1 5 2418.1 84.3 HUMAN 1 -3.0323 -8.5625 IDSFSVQSLDSRSVS-p P82094-2;S333-p IDSFSVQSLDSRSVS 0.130013664511896 0.862901166327382 0.264333333333333 -0.0323333333333333 18.3301196609273 0.903189868704513 0.264333333333333 -0.0323333333333333 0.0146888580495396 0.812233715891517 3.52938593065222 -0.24939091405658 P82094 TMF1 P82094.2.S333.p_TMF1 P82094-2_S333s _1_1_333_333 P82094-2 P82094-2|F8WF45 Isoform 2 of TATA element modulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20897.20897.2 17.56 11.38 3.325 4 1 1 0 831.9015 1582.8274 S333s TMT10 326 (R) IDSFSVQsLDSR (S) IDS(0.0)FS(0.0)VQS(0.99)LDS(0.0)R s:Phosphorylated S TMF1 123666.4 3 10 393.1 331.84 HUMAN 1 18.3301 -0.9032 IDSPGILSGEKQRIS-p Q9H223;S162-p IDSPGILSGEKQRIS 0.852742978991457 0.29495226677677 0.028 0.147333333333333 1.34093145391329 6.99970268639774 0.028 0.147333333333333 0.734356350048478 0.19953989132811 0.357338849235025 1.46055766862619 Q9H223 EHD4 Q9H223.S162.p_EHD4 Q9H223_S162s _1_1_162_162 Q9H223 Q9H223 EH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25065.25065.3 18.28 18.28 3.728 4 1 1 0 680.7059 1960.1367 S162s TMT10 151 (K) SISVIDSPGILsGEK (Q) S(0.0)IS(0.0)VIDS(0.0)PGILS(0.99)GEK K:TMT10,s:Phosphorylated S EHD4 61402.2 3 2 1561.1 131.45 HUMAN 1 1.3409 6.9997 IDSPPVWSPEGYMAL-p Q5JSZ5;S745-p IDSPPVWSPEGYMAL 0.147637912219239 0.00306984912269301 -0.244666666666667 -0.662333333333333 16.8615846678369 37.7667901961969 -0.244666666666667 -0.662333333333334 0.020598781610815 0.000167232614823969 -3.23542219045841 -9.17086939270597 Q5JSZ5 PRRC2B Q5JSZ5.S745.p_PRRC2B Q5JSZ5_S745s _1_1_745_745 Q5JSZ5 Q5JSZ5|Q5JSZ5-5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27327.27327.4 18.65 18.65 1.182 5 1 1 0 800.1764 3117.7262 S745s TMT10 734 (R) KVTPIDSPPVWsPEGYMALQSK (G) KVT(0.0)PIDS(0.0)PPVWS(0.99)PEGY(0.0)MALQS(0.0)K K:TMT10,s:Phosphorylated S PRRC2B 244103.4 3 64 36.2 882.05 HUMAN 1 -16.8616 -37.7668 IDTHNRVSKEDEDIY-p Q9NYY3;S389-p IDTHNRVSKEDEDIY 0.0262993197378669 0.0614078099331813 -0.712 -0.336666666666667 36.685893288585 16.1378391142939 -0.712 -0.336666666666667 0.000214491788807503 0.0243341448326502 -8.75412212337089 -3.09249324452671 Q9NYY3 PLK2 Q9NYY3.S389.p_PLK2 Q9NYY3_S389s _1_1_389_389 Q9NYY3 Q9NYY3|A0A087WUH9 Serine/threonine-protein kinase PLK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12241.12241.4 11.4 11.4 1.18 4 1 1 0 723.8746 2812.5084 S389s TMT10 381 (R) YIDTHNRVsKEDEDIYK (L) Y(0.0)IDT(0.0)HNRVS(0.99)KEDEDIY(0.0)K K:TMT10,s:Phosphorylated S PLK2 79319.2 1 2 3093.1 60.86 HUMAN 1 -36.6859 -16.1378 IDTKMRPSLDAGFPT-p Q9UPX8-3;S1256-p IDTKMRPSLDAGFPT 0.480199874113572 0.0205344648135939 -0.146333333333333 -0.516333333333333 5.86494871614728 23.092944019444 -0.146333333333333 -0.516333333333333 0.259122501976731 0.00490575209575185 -1.2604677303145 -4.57128717228263 Q9UPX8 SHANK2 Q9UPX8.3.S1256.p_SHANK2 Q9UPX8-3_S1256s _1_1_1256_1256 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18153.18153.3 10.74 10.74 10.739 3 1 1 0 619.6487 1776.9628 S1256s TMT10 1253 (K) MRPsLDAGFPTVTR (Q) MRPS(0.99)LDAGFPT(0.0)VT(0.0)R s:Phosphorylated S SHANK2 202341.2 1 19 86.1 628.23 HUMAN 1 -5.8649 -23.0929 IDTPGILSGEKQRIS-p Q9H4M9;S159-p IDTPGILSGEKQRIS 0.917779579109931 0.13720225770253 0.0163333333333333 0.164 0.727954522728161 11.3670767757589 0.0163333333333333 0.164 0.84567705558465 0.0729948671384222 0.204173882232343 2.21950818279536 Q9H4M9 EHD1 Q9H4M9.S159.p_EHD1 Q9H4M9_S159s _1_1_159_159 Q9H4M9 A0A024R571|Q9H4M9 EH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37139.37139.3 23.27 19.73 1.52 4 1 1 0 1151.933 3373.8152 S159s TMT10 136 (R) FMCAQLPNPVLDSISIIDTPGILsGEK (Q) FMCAQLPNPVLDS(0.0)IS(0.0)IIDT(0.0)PGILS(0.99)GEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EHD1 60682.8 5 3 1572.1 130.65 HUMAN 1 0.728 11.3671 IDVPKPGSPEPQVSG-p Q08050-3;S742-p IDVPKPGSPEPQVSG 0.138008280716551 0.00342379274317385 0.251333333333333 -0.739666666666667 17.6102165675763 36.8636038322579 0.251333333333333 -0.739666666666667 0.0173371754112545 0.000205892068495827 3.3838057822599 -8.80626703441841 Q08050 FOXM1 Q08050.3.S742.p_FOXM1 Q08050-3_S742s _1_1_742_742 Q08050-3 Q08050-3|Q08050-2|A0A0D9SFF0 Isoform 4 of Forkhead box protein M1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36138.36138.4 21.01 19.15 3.375 8 1 1 0 1182.1226 4645.4765 S742s TMT10 714 (R) LLSSEPLDLISVPFGNSSPSDIDVPKPGsPEPQVSGLAANR (S) LLS(0.0)S(0.0)EPLDLIS(0.0)VPFGNS(0.0)S(0.0)PS(0.0)DIDVPKPGS(0.99)PEPQVS(0.0)GLAANR K:TMT10,s:Phosphorylated S FOXM1 89107.7 2 9 1076.1 180.52 HUMAN 1 17.6102 -36.8636 IDVTNLPTPRKFLDT-p Q96A65;T237-p IDVTNLPTPRKFLDT 0.85414662969521 0.00489957889240122 0.0386666666666667 -0.579333333333333 1.32804856747021 33.7126263831003 0.0386666666666667 -0.579333333333333 0.736537974666022 0.000425341111554744 0.354255741594752 -7.63209752456821 Q96A65 EXOC4 Q96A65.T237.p_EXOC4 Q96A65_T237t _1_1_237_237 Q96A65 Q96A65|Q96A65-2 Exocyst complex component 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27174.27174.3 22.12 22.12 2.178 3 1 1 0 673.0222 1937.0905 T237t TMT10 224 (K) DASVPLIDVTNLPtPR (K) DAS(0.0)VPLIDVT(0.0)NLPT(0.99)PR t:Phosphorylated T EXOC4 111237.8 5 6 1685.1 121.05 HUMAN 1 1.328 -33.7126 IDYQGRPSGGFVISG-p Q03188;S763-p IDYQGRPSGGFVISG 0.604290644941606 0.0266946220183018 0.0776666666666667 -0.533666666666667 4.03948781356021 21.360200307579 0.0776666666666667 -0.533666666666667 0.394503825253365 0.00731105362280761 0.924670243280859 -4.17288860256435 Q03188 CENPC Q03188.S763.p_CENPC Q03188_S763sS773s_2_2_763_773 Q03188 Q03188 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30093.30093.4 17.61 15.03 2.811 7 2 2 0 800.4025 3038.6563 S763s S773s TMT10 756 (R) IDYQGRPsGGFVISGVLsPDTISSK (R) IDY(0.0)QGRPS(0.99)GGFVIS(0.0)GVLS(0.99)PDT(0.0)IS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CENPC 107459.5 3 28 209.1 442.77 HUMAN 1 4.0395 -21.3602 IEAGETQSQKTQKVI-p Q96DN5;S875-p IEAGETQSQKTQKVI 0.10854647135141 0.183403268876096 0.368 -0.150666666666667 20.2330637207621 9.68787664526353 0.368 -0.150666666666667 0.00947749639543486 0.107451463616367 3.92914783627651 -1.92677936693481 Q96DN5 TBC1D31 Q96DN5.S875.p_TBC1D31 Q96DN5_S875s _1_1_875_875 Q96DN5 Q96DN5 TBC1 domain family member 31 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14348.14348.3 8.53 8.53 1.731 2 1 1 0 581.3098 1661.9474 S875s TMT10 867 (K) LIEAGETQsQK (T) LIEAGET(0.0)QS(0.99)QK K:TMT10,s:Phosphorylated S TBC1D31 125214.1 3 2 3604.1 47.23 HUMAN 1 20.2331 -9.6879 IEDDESGTENREEKD-p Q9Y2W1;T941-p IEDDESGTENREEKD 0.886027178849554 0.0264638389566224 -0.0266666666666667 0.364 1.03035803896099 21.4109745155172 -0.0266666666666667 0.364 0.78879508547413 0.00722607639126341 -0.281476181682501 4.18424547916631 Q9Y2W1 THRAP3 Q9Y2W1.T941.p_THRAP3 Q9Y2W1_S928sS939sT941t_3_3_928_941 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16388.16388.4 7.15 7.15 99 3 3 3 0 988.4177 3710.7661 S928s S939s T941t TMT10 922 (K) WAHDKFsGEEGEIEDDEsGtENREEK (D) WAHDKFS(1.0)GEEGEIEDDES(1.0)GT(1.0)ENREEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T THRAP3 108720.9 2 98 10.2 1293.04 HUMAN 1 -1.0304 21.411 IEDDHEGSFKSHKTQ-p Q9Y6J0;S20-p IEDDHEGSFKSHKTQ 0.363920347814779 0.0209476632838496 0.162333333333333 0.344333333333333 8.14747812155767 22.9632190203137 0.162333333333333 0.344333333333333 0.15319767978155 0.0050544988022706 1.66073485161274 4.54066281882044 Q9Y6J0 CABIN1 Q9Y6J0.S20.p_CABIN1 Q9Y6J0_S20s _1_1_20_20 Q9Y6J0 Q9Y6J0|A0A087WWW8 Calcineurin-binding protein cabin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19744.19744.3 22.19 22.19 3.866 4 1 1 0 848.4183 2463.2768 S20s TMT10 4 (R) IAALNASSTIEDDHEGsFK (S) IAALNAS(0.0)S(0.0)T(0.0)IEDDHEGS(0.99)FK K:TMT10,s:Phosphorylated S CABIN1 248858 1 2 763.1 229.21 HUMAN 1 8.1475 22.9632 IEDPANDTVDFPKRT-p O60716-3;T643-p IEDPANDTVDFPKRT 0.219082158828358 0.262600243524549 -0.221 -0.113333333333333 12.6999388078677 7.65015658966201 -0.221 -0.113333333333333 0.0537039363206499 0.171784644719397 -2.45713546914468 -1.57393048976193 O60716 CTNND1 O60716.3.T643.p_CTNND1 O60716-3_T643t _1_1_643_643 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-24|O60716-25|O60716-26|O60716-28|O60716-30|O60716-27|O60716-29|O60716-31|O60716-32 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16960.16960.4 14.88 14.72 99 1 1 1 0 717.6493 2787.6062 T643t TMT10 632 (R) GKKPIEDPANDtVDFPK (R) GKKPIEDPANDT(1.0)VDFPK K:TMT10,t:Phosphorylated T CTNND1 105545.3 2 27 21.1 1014.17 HUMAN 1 -12.6999 -7.6502 IEDTEPMSPVLNSKF-p Q12888-2;S557-p IEDTEPMSPVLNSKF 0.918430174900821 0.0322345694854982 0.016 0.274 0.718997281559124 20.1298435858889 0.016 0.274 0.847423048362633 0.00970544921451408 0.201826309436233 3.90318909188806 Q12888 TP53BP1 Q12888.2.S557.p_TP53BP1 Q12888-2_S557s_1_1_557_557 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16114.16114.4 27.28 27.28 6.158 7 1 1 0 1011.4702 3946.905 M556m S557s TMT10 533 (K) MESLSSHRIDEDGENTQIEDTEPmsPVLNSK (F) M(0.0)ES(0.0)LS(0.0)S(0.0)HRIDEDGENT(0.0)QIEDT(0.0)EPM(0.99)S(0.99)PVLNS(0.0)K K:TMT10,m:Oxidized methionine,s:Phosphorylated S TP53BP1 216167.2 26 25 3.1 2297.07 HUMAN 1 0.719 20.1298 IEEEIPDSPGIEKHD-p Q1RLN5;S545-p IEEEIPDSPGIEKHD 0.151231149367929 0.441758446756907 -0.331666666666667 -0.0756666666666666 16.5263640614248 4.72456154264221 -0.331666666666667 -0.0756666666666666 0.0222517203797019 0.336933230310631 -3.16992152222324 -1.05312892140325 Q1RLN5 ARHGAP12 Q1RLN5.S545.p_ARHGAP12 Q1RLN5_S545s _1_1_545_545 Q1RLN5 Q8IWW6|Q8IWW6-4|Q8IWW6-2|Q1RLN5|Q8IWW6-3 ARHGAP12 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26262.26262.4 20.88 20.88 4.097 5 1 1 0 913.705 3571.8267 S545s TMT10 522 (K) VLSSTINNQAVETDEGIEEEIPDsPGIEK (H) VLS(0.0)S(0.0)T(0.0)INNQAVET(0.0)DEGIEEEIPDS(0.99)PGIEK K:TMT10,s:Phosphorylated S ARHGAP12 91157.4 4 9 974.1 193.01 HUMAN 1 -16.5264 -4.7246 IEEELPRTPLLDEEE-p P23634;T1181-p IEEELPRTPLLDEEE 0.298896817117906 0.159622046268465 -0.290333333333333 0.353333333333333 9.85981284455855 10.4801006388189 -0.290333333333333 0.353333333333333 0.103280591267772 0.0895344017552051 -1.95736514334533 2.06437757059275 P23634 ATP2B4 P23634.T1181.p_ATP2B4 P23634_T1181t _1_1_1181_1181 P23634 P23634|P23634-8|P23634-6|P23634-7 Plasma membrane calcium-transporting ATPase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.13021.13021.3 9.19 6.04 99 1 1 1 0 656.295 1886.9068 T1181t Hydrogen 1181 (R) tPLLDEEEEENPDK (A) T(1.0)PLLDEEEEENPDK K:TMT10-Lys-Only,t:Phosphorylated T ATP2B4 139115.8 2 16 921.2 200.23 HUMAN 1 -9.8598 10.4801 IEEILADSEDEEDNE-p Q5JTH9;S1080-p IEEILADSEDEEDNE 0.893740328654552 0.0739469982719304 0.0273333333333333 0.328333333333333 0.953460337486229 15.0113365489516 0.0273333333333333 0.328333333333333 0.802886149938545 0.0315403381451169 0.262163353488617 2.87869741030128 Q5JTH9 RRP12 Q5JTH9.S1080.p_RRP12 Q5JTH9_S1080s _1_1_1080_1080 Q5JTH9 Q5JTH9|Q5JTH9-3|Q5JTH9-2 RRP12-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18736.18736.3 25.52 25.52 9.91 3 1 1 0 1035.4319 3024.3239 S1080s TMT10 1070 (K) GDSIEEILADsEDEEDNEEEERSR (G) GDS(0.0)IEEILADS(0.99)EDEEDNEEEERS(0.0)R s:Phosphorylated S RRP12 145125.9 9 7 1122.1 175.08 HUMAN 1 0.9535 15.0113 IEEKLGMTPIRKCND-p A6NHR9;T1962-p IEEKLGMTPIRKCND 0.242838759007938 0.000952253650599092 -0.171333333333333 -1.476 11.7580431741304 56.005029464219 -0.171333333333333 -1.476 0.0667107283909484 2.50897915752172e-06 -2.28949029785652 -20.3272632684224 A6NHR9 SMCHD1 A6NHR9.T1962.p_SMCHD1 A6NHR9_T1962t _1_1_1962_1962 A6NHR9 A6NHR9 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14659.14659.2 8.84 8.84 99 1 1 1 0 727.4229 1373.8703 T1962t TMT10 1959 (K) LGMtPIRK (C) LGMT(1.0)PIRK K:TMT10,t:Phosphorylated T SMCHD1 228081 2 9 2211.1 93.37 HUMAN 1 -11.758 -56.005 IEENNNFSKMAEEKL-p P16949;S94-p IEENNNFSKMAEEKL 0.928133198175071 0.443151723916668 0.0156666666666667 -0.14 0.641862504830539 4.70712888250011 0.0156666666666667 -0.14 0.862608532217999 0.338288404503035 0.181462045021378 -1.04990209758451 P16949 STMN1 P16949.S94.p_STMN1 P16949_S94s _1_1_94_94 P16949 P16949-2|Q93045-2 Stathmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12715.12715.3 7.6 7.6 99 1 1 1 0 568.6187 1623.8743 S94s TMT10 86 (K) AIEENNNFsK (M) AIEENNNFS(1.0)K K:TMT10,s:Phosphorylated S STMN1 17302.2 1 9 690.1 243.18 HUMAN 1 0.6419 -4.7071 IEERYRPSMEGYRAP-p O60716-3;S244-p IEERYRPSMEGYRAP 0.657302725891418 0.00698909749920336 -0.0596666666666667 -0.49 3.41950806418559 30.8993662363245 -0.0596666666666667 -0.49 0.455039600661918 0.000812949140753187 -0.804403866759979 -6.69945334810034 O60716 CTNND1 O60716.3.S244.p_CTNND1 O60716-3_S244s _1_1_244_244 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10277.10277.5 19.15 15.8 4.419 5 1 1 0 630.1101 3066.5529 S244s TMT10 241 (R) YRPsMEGYRAPSRQDVYGPQPQVR (V) Y(0.0)RPS(0.99)MEGY(0.0)RAPS(0.0)RQDVY(0.0)GPQPQVR s:Phosphorylated S CTNND1 105545.3 4 15 21.1 1014.17 HUMAN 1 -3.4195 -30.8994 IEESFNLSDESCGPN-p Q8TF40;S314-p IEESFNLSDESCGPN 0.299702423811655 0.173195840605146 0.183 0.171666666666667 9.83983262778635 10.0121907595672 0.183 0.171666666666667 0.103756840176791 0.0997196909888966 1.95389688597446 1.98302547075618 Q8TF40 FNIP1 Q8TF40.S314.p_FNIP1 Q8TF40_S314s _1_1_314_314 Q8TF40 Q8TF40|Q8TF40-3|J3KNG8|A0A087WX11 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28918.28918.3 23.01 23.01 3.715 4 1 1 0 934.7565 2722.298 S314s TMT10 305 (R) WSIEESFNLsDESCGPNPGIVR (K) WS(0.0)IEES(0.0)FNLS(0.99)DES(0.0)CGPNPGIVR C:Carbamidomethylation,s:Phosphorylated S FNIP1 132549.9 1 12 310.1 372.19 HUMAN 1 9.8398 10.0122 IEESNILSPVQDGTK-p Q14571;S1160-p IEESNILSPVQDGTK 0.246863210495205 0.193360795955699 -0.285 -0.139333333333333 11.6169843556062 9.38307358574888 -0.285 -0.139333333333333 0.0689130647257767 0.115263722551528 -2.26457666360238 -1.87399202975154 Q14571 ITPR2 Q14571.S1160.p_ITPR2 Q14571_S1160s _1_1_1160_1160 Q14571 Q14571 Inositol 1,4,5-trisphosphate receptor type 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20274.20274.4 21.4 21.4 2.438 4 1 1 0 1002.2868 3926.1528 S1160s TMT10 1148 (K) GGEEPIEESNILsPVQDGTKKPQIDSNK (S) GGEEPIEES(0.0)NILS(0.99)PVQDGT(0.0)KKPQIDS(0.0)NK K:TMT10,s:Phosphorylated S ITPR2 311253.2 2 3 3426.1 51.39 HUMAN 1 -11.617 -9.3831 IEGHLTASQ______-p Q8WXD5;S166-p IEGHLTASQ______ 0.178168547547072 0.10828541766957 0.278666666666667 0.188666666666667 14.7994292326563 12.7557378990659 0.278666666666667 0.188666666666667 0.0331174642931412 0.0530183502801821 2.84091792196969 2.46582134077053 Q8WXD5 GEMIN6 Q8WXD5.S166.p_GEMIN6 Q8WXD5_S166s _1_1_166_166 Q8WXD5 Q8WXD5 Gem-associated protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23703.23703.2 17.46 17.46 1.246 2 1 1 0 860.4344 1639.8853 S166s TMT10 155 (R) VQDLIEGHLTAsQ (-) VQDLIEGHLT(0.0)AS(0.99)Q s:Phosphorylated S GEMIN6 18995.1 2 1 5653.1 17.46 HUMAN 1 14.7994 12.7557 IEGLTGLSIGPDFQK-p B4DUT8;S45-p IEGLTGLSIGPDFQK 0.202247703341141 0.596937026193664 0.216 -0.0633333333333333 13.474215225902 3.03364800148292 0.216 -0.0633333333333333 0.0449343514118244 0.497319169643804 2.59687941791285 -0.727135623752315 B4DUT8 CNN2 B4DUT8.S45.p_CNN2 B4DUT8_S45s _1_1_45_45 B4DUT8 B4DUT8|Q99439 Calponin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35710.35710.3 17.85 17.85 3.653 3 1 1 0 800.7552 2320.2953 S45s TMT10 36 (R) TWIEGLTGLsIGPDFQK (G) T(0.0)WIEGLT(0.0)GLS(0.99)IGPDFQK K:TMT10,s:Phosphorylated S CNN2 36399.5 1 3 1713.2 119.85 HUMAN 1 13.4742 -3.0336 IEGPLLASDVGRDRS-p P18583-5;S1759-p IEGPLLASDVGRDRS 0.0813263831752068 0.398067966757123 0.379 0.266666666666667 23.2831872157143 5.3184933316221 0.379 0.266666666666667 0.00469549387561765 0.293866896762437 4.62169360262855 1.16186887014646 P18583 SON P18583.5.S1759.p_SON P18583-5_S1759s _1_1_1759_1759 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17176.17176.3 13.75 13.75 99 1 1 1 0 645.6684 1855.0235 S1759s TMT10 1750 (R) AGIEGPLLAsDVGRDR (S) AGIEGPLLAS(1.0)DVGRDR s:Phosphorylated S SON 267429.6 1 27 45.1 778.56 HUMAN 1 23.2832 5.3185 IEGVTKTSDPLKILA-p Q96A65;S555-p IEGVTKTSDPLKILA 0.251728832793614 0.0394283939334698 -0.396333333333333 0.486333333333333 11.4239478174219 18.8390443717903 -0.396333333333333 0.486333333333333 0.0720452276945104 0.0130645833159219 -2.23055535180676 3.63095864570435 Q96A65 EXOC4 Q96A65.S555.p_EXOC4 Q96A65_S555sT566t_2_2_555_566 Q96A65 Q96A65 Exocyst complex component 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32263.32263.5 10.06 5.93 8.67 4 2 2 0 990.7324 4787.7402 N538n N545n S555s T566t Hydrogen 534 (K) NIFLnQVLAEInKEIEGVTKTsDPLKILANADtMK (V) N(0.0)IFLN(0.99)QVLAEIN(0.99)KEIEGVT(0.0)KT(0.0)S(0.99)DPLKILAN(0.0)ADT(0.99)MK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S,t:Phosphorylated T EXOC4 111237.8 1 8 1685.1 121.05 HUMAN 1 -11.4239 18.839 IEIDNKVSDEEDKTS-p Q03188;S225-p IEIDNKVSDEEDKTS 0.615123191884599 0.153313238244886 -0.0773333333333334 0.158666666666667 3.91753700400345 10.7101061555265 -0.0773333333333334 0.158666666666667 0.405738575020034 0.0849159718590529 -0.901333574905078 2.10447638056336 Q03188 CENPC Q03188.S225.p_CENPC Q03188_S225s _1_1_225_225 Q03188 Q03188|Q03188-2 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12380.12380.5 16.58 16.58 3.602 3 1 1 0 689.9637 3365.8206 S225s TMT10 217 (K) KIEIDNKVsDEEDKTSEGQER (K) KIEIDNKVS(0.99)DEEDKT(0.0)S(0.0)EGQER K:TMT10,s:Phosphorylated S CENPC 107459.5 7 13 209.1 442.77 HUMAN 1 -3.9175 10.7101 IEIERLQSLTENLTK-p P15924;S1708-p IEIERLQSLTENLTK 0.250039895958114 0.0523931863384115 -0.252 0.383333333333333 11.4905991535907 17.0844671007119 -0.252 0.383333333333333 0.0709479881216038 0.0195683086534427 -2.2422929484503 3.27677747990449 P15924 DSP P15924.S1708.p_DSP P15924_S1708s _1_1_1708_1708 P15924 P15924 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25225.25225.3 9.5 6.93 1.131 3 1 1 0 562.3153 1604.9623 S1708s TMT10 1706 (R) LQsLTENLTK (E) LQS(0.99)LT(0.0)ENLT(0.0)K K:TMT10,s:Phosphorylated S DSP 334221.3 2 9 104.1 590.4 HUMAN 1 -11.4906 17.0845 IEIIQADSPPIIVGE-p A0A087X0W9;S279-p IEIIQADSPPIIVGE 0.939184601237554 0.0649657413868305 -0.0126666666666667 0.254 0.532584531731469 15.7993845817968 -0.0126666666666667 0.254 0.884589025008823 0.0263064074116218 -0.152138987284569 3.0276579255549 A0A087X0W9 OTUD6B A0A087X0W9.S279.p_OTUD6B A0A087X0W9_S279s _1_1_279_279 A0A087X0W9 A0A087X0W9|Q8N6M0|Q8N6M0-2 OTU domain containing 6B, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35155.35155.4 17.7 17.7 7.567 5 1 1 0 900.7408 3519.9715 S279s TMT10 263 (R) ALSHILQTPIEIIQADsPPIIVGEEYSK (K) ALS(0.0)HILQT(0.0)PIEIIQADS(0.99)PPIIVGEEY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S OTUD6B 37610.5 1 1 4764.1 26.93 HUMAN 1 -0.5326 15.7994 IEKAQLKSLELIQGE-p Q8IWZ3-6;S803-p IEKAQLKSLELIQGE 0.0956171041021503 0.327657775514947 -0.398 -0.116 21.6170644130014 6.41617094066276 -0.398 -0.116 0.00689117944011835 0.228235347573525 -4.23490673581422 -1.35803359331468 Q8IWZ3 ANKHD1 Q8IWZ3.6.S803.p_ANKHD1 Q8IWZ3-6_S803s _1_1_803_803 Q8IWZ3-6 Q8IWZ3-6|Q8IWZ3-4 Isoform 6 of Ankyrin repeat and KH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23874.23874.3 14.8 14.8 99 1 1 1 0 627.0168 1799.0679 S803s TMT10 803 (K) sLELIQGEPLNK (D) S(1.0)LELIQGEPLNK K:TMT10,s:Phosphorylated S ANKHD1 279224.1 1 28 287.1 383.69 HUMAN 1 -21.6171 -6.4162 IEKDSPESPFEVIID-p O95197;S246-p IEKDSPESPFEVIID 0.0552688318450056 0.00396881289998424 -0.442333333333333 -0.577 27.3848912741109 35.405909827298 -0.442333333333333 -0.577 0.00182604246358749 0.000288010961662999 -5.67427863020903 -8.24484980767078 O95197 RTN3 O95197.S246.p_RTN3 O95197_S246s _1_1_246_246 O95197 O95197|O95197-2|O95197-7 Reticulon-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28250.28250.4 14.76 12.9 3.236 3 1 1 0 797.1663 3105.681 S246s TMT10 233 (K) VSGDDVIEKDSPEsPFEVIIDK (A) VS(0.0)GDDVIEKDS(0.0)PES(0.99)PFEVIIDK K:TMT10,s:Phosphorylated S RTN3 113236.6 2 4 1374.1 148.87 HUMAN 1 -27.3849 -35.4059 IEKFSFRSQEDLNEP-p Q7Z460-4;S1135-p IEKFSFRSQEDLNEP 0.26937080367531 0.0908933218086992 -0.183333333333333 0.183333333333333 10.8009402223196 13.7761044674095 -0.183333333333333 0.183333333333333 0.0831583718569876 0.0419169382897187 -2.12127109844625 2.65034301453652 Q7Z460 CLASP1 Q7Z460.4.S1135.p_CLASP1 Q7Z460-4_S1135s _1_1_1135_1135 Q7Z460-4 Q7Z460|Q7Z460-3|Q7Z460-5|F8WA11|Q7Z460-4|Q7Z460-2 Isoform 4 of CLIP-associating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16419.16419.4 16.4 16.4 2.464 2 1 1 0 601.8165 2324.2763 S1135s TMT10 1131 (K) FSFRsQEDLNEPIKR (D) FS(0.0)FRS(0.99)QEDLNEPIKR K:TMT10,s:Phosphorylated S CLASP1 164028.5 9 51 158.3 498.15 HUMAN 1 -10.8009 13.7761 IEKKRKKSKGDSDIS-p Q5T200;S1010-p IEKKRKKSKGDSDIS 0.0428370985731628 0.00912637275737643 -1.258 -0.973666666666667 30.4803410838755 28.8514337425936 -1.258 -0.973666666666667 0.000895294448632199 0.00130273663314333 -6.57961010941541 -6.08098357751901 Q5T200 ZC3H13 Q5T200.S1010.p_ZC3H13 Q5T200_S1010sS1014sS1017s_3_3_1010_1017 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11453.11453.4 8.37 8.37 8.371 4 3 3 0 770.6169 2839.5455 S1010s S1014s S1017s TMT10 1010 (K) sKGDsDIsDEEAAQQSKK (K) S(0.99)KGDS(0.99)DIS(0.99)DEEAAQQS(0.0)KK K:TMT10,s:Phosphorylated S ZC3H13 197316.7 2 49 24.1 987.82 HUMAN 1 -30.4803 -28.8514 IEKLLTRTPDIAQRA-p Q9UEW8;T354-p IEKLLTRTPDIAQRA 0.957246455101486 0.397389434883172 -0.00833333333333333 0.093 0.369806570555563 5.32835140758605 -0.00833333333333333 0.093 0.918373498803821 0.293200603064787 -0.10735756380041 1.16365577499372 Q9UEW8 STK39 Q9UEW8.T354.p_STK39 Q9UEW8_T354t _1_1_354_354 Q9UEW8 Q9UEW8|Q9UEW8-2 STE20/SPS1-related proline-alanine-rich protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13455.13455.3 15.54 15.54 2.219 2 1 1 0 531.6286 1512.9059 T354t TMT10 350 (K) LLTRtPDIAQR (A) LLT(0.0)RT(0.99)PDIAQR t:Phosphorylated T STK39 59986.4 4 1 2802.1 70.1 HUMAN 1 -0.3698 5.3284 IEKQGRPSPTSPVKP-p Q13905-4;S231-p IEKQGRPSPTSPVKP 0.198300279868763 0.0128136758178629 0.203 0.533 13.6822904850668 26.3677471304188 0.203 0.533 0.0428322561922886 0.00230794410669236 2.63476944362146 5.39152234404967 Q13905 RAPGEF1 Q13905.4.S231.p_RAPGEF1 Q13905-4_S231s_1_1_231_231 Q13905-4 Q13905-3|Q13905-4|Q13905-2 Isoform 4 of Rap guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21234.21234.5 15.07 15.07 2 7 1 1 0 929.9033 4582.5448 Q227q S231s Hydrogen 227 (K) qGRPsPTSPVKPSSPASKPDGPAELPLTDREVEILNK (T) Q(1.0)GRPS(0.99)PT(0.0)S(0.0)PVKPS(0.0)S(0.0)PAS(0.0)KPDGPAELPLT(0.0)DREVEILNK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S RAPGEF1 123026.2 2 3 676.1 246.9 HUMAN 1 13.6823 26.3677 IEKTKSLSFRSQMLA-p P60228;S412-p IEKTKSLSFRSQMLA 0.301769380581339 0.107280336911149 -0.272333333333333 -0.474 9.75596385720268 12.8062146350176 -0.272333333333333 -0.474 0.105780012567294 0.0524057012219846 -1.93934252106223 -2.47487204301239 P60228 EIF3E P60228.S412.p_EIF3E P60228_S412s _1_1_412_412 P60228 P60228|E5RGA2 Eukaryotic translation initiation factor 3 subunit E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25453.25453.3 10.54 10.54 1.185 3 1 1 0 765.0694 2213.2187 S412s TMT10 410 (K) SLsFRSQMLAMNIEK (K) S(0.0)LS(0.99)FRS(0.0)QMLAMNIEK K:TMT10,s:Phosphorylated S EIF3E 52619.2 1 3 2988.1 63.95 HUMAN 1 -9.756 -12.8062 IELAKEWTPAGKAKQ-p O00203;T661-p IELAKEWTPAGKAKQ 0.624861268177628 0.00604775327324358 -0.0673333333333333 -0.568 3.79558332372859 32.0217511798338 -0.0673333333333334 -0.568 0.417293545813197 0.000627805161624215 -0.877847803525148 -7.05942807856108 O00203 AP3B1 O00203.T661.p_AP3B1 O00203_T661t _1_1_661_661 O00203 O00203|O00203-3 AP-3 complex subunit beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12878.12878.2 8.87 6.8 99 1 1 1 0 663.8461 1246.7196 T661t TMT10 659 (K) EWtPAGK (A) EWT(1.0)PAGK K:TMT10,t:Phosphorylated T AP3B1 121888.5 1 6 445.1 310.27 HUMAN 1 -3.7956 -32.0218 IELCRADSDSSQRDR-p V9GYM8;S764-p IELCRADSDSSQRDR 0.468420595180194 0.076763783434572 0.13 -0.195 6.08235100075778 14.7913100761817 0.13 -0.195 0.246470473787182 0.0331794354634594 1.29922047045217 -2.83758194970349 V9GYM8 NotFound V9GYM8.S764.p_NotFound V9GYM8_S764s _1_1_764_764 V9GYM8 V9GYM8|Q92974 Rho guanine nucleotide exchange factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11965.11965.4 14.41 9.55 3.055 5 1 1 0 656.5496 2543.2106 S764s TMT10 752 (R) TFNGSIELCRADsDSSQRDR (N) T(0.0)FNGS(0.0)IELCRADS(0.99)DS(0.0)S(0.0)QRDR C:Carbamidomethylation,s:Phosphorylated S ARHGEF2 117095.6 3 16 380.1 335.31 HUMAN 1 6.0824 -14.7913 IELEDTDSENSSSEK-p Q96JK2;S931-p IELEDTDSENSSSEK 0.30573507454244 0.328929781169029 0.269666666666667 0.112 9.64648387620437 6.39384400343974 0.269666666666667 0.112 0.108480483547911 0.229411719281358 1.92035263101511 1.35409107036728 Q96JK2 DCAF5 Q96JK2.S931.p_DCAF5 Q96JK2_T929tS931s_2_2_929_931 Q96JK2 Q96JK2|Q96JK2-3|Q96JK2-2 DDB1- and CUL4-associated factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9546.9546.3 13.21 13.21 3.257 5 2 2 0 785.998 2196.0465 T929t S931s Hydrogen 922 (R) QRIELEDtDsENSSSEK (K) QRIELEDT(0.99)DS(0.99)ENS(0.0)S(0.0)S(0.0)EK K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S DCAF5 105045.5 3 12 948.1 196.79 HUMAN 1 9.6465 6.3938 IELGLLESPDIYTSS-p Q7Z333-4;S207-p IELGLLESPDIYTSS 0.178631329890346 0.418770794400907 -0.296 0.0996666666666667 14.7714718755397 5.03052729010621 -0.296 0.0996666666666667 0.0333313429741688 0.314012741833432 -2.83569941054654 1.10942407983307 Q7Z333 SETX Q7Z333.4.S207.p_SETX Q7Z333-4_S207s _1_1_207_207 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37314.37314.3 19.84 19.84 3.733 5 1 1 0 915.1669 2663.5159 S207s TMT10 199 (K) VIELGLLEsPDIYTSSVLEK (G) VIELGLLES(0.99)PDIY(0.0)T(0.0)S(0.0)S(0.0)VLEK K:TMT10,s:Phosphorylated S SETX 310728.6 2 1 192.1 463.82 HUMAN 1 -14.7715 5.0305 IELNINGSPGAESDL-p Q9BYW2;S676-p IELNINGSPGAESDL 0.606388864772256 0.427127081972133 0.069 0.087 4.0177958714913 4.91684977301163 0.069 0.087 0.396479204068178 0.322340609450359 0.920529777196886 1.08858120886509 Q9BYW2 SETD2 Q9BYW2.S676.p_SETD2 Q9BYW2_S676s _1_1_676_676 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31872.31872.4 23.47 23.47 1.275 6 1 1 0 839.152 3273.6172 S676s TMT10 665 (R) SFCPIELNINGsPGAESDLATFCTSK (T) S(0.0)FCPIELNINGS(0.99)PGAES(0.0)DLAT(0.0)FCT(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SETD2 290615.4 8 10 58.1 711.11 HUMAN 1 4.0178 4.9168 IELQSQLSMKAALED-p P08727;S315-p IELQSQLSMKAALED 0.180312479437108 0.00901683866038459 -0.240333333333333 0.626333333333333 14.6789963846641 28.9451948449516 -0.240333333333333 0.626333333333334 0.0340486864050264 0.00127491290006549 -2.81846068578988 6.10827003500615 P08727 KRT19 P08727.S315.p_KRT19 P08727_S315s _1_1_315_315 P08727 O77727|P13646|P13646-3|K7ERE3|P08727|P13646-2 Keratin, type I cytoskeletal 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33250.33250.3 11.14 11.14 1.749 3 1 1 0 786.0931 2276.2936 S315s TMT10 302 (R) TLQGLEIELQSQLsMK (A) T(0.0)LQGLEIELQS(0.0)QLS(0.99)MK K:TMT10,s:Phosphorylated S KRT19 44105.2 1 19 383.1 334.07 HUMAN 1 -14.679 28.9452 IENPQYFSDACVHHI-p P04629;S498-p IENPQYFSDACVHHI 0.158312848211182 0.973596765748086 0.823333333333333 0.00833333333333336 16.044444590153 0.163828986861568 0.823333333333333 0.00833333333333335 0.0248631151291439 0.96297963169574 3.07672876446622 0.0485979685568587 P04629 NTRK1 P04629.S498.p_NTRK1 P04629_S484sS498s_2_2_484_498 P04629 P04629 High affinity nerve growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13027.13027.4 7.69 1.64 1.55 3 2 2 0 910.436 3477.8326 S484s N493n S498s TMT10 483 (K) GsGLQGHIIEnPQYFsDACVHHIKRR (D) GS(0.99)GLQGHIIEN(1.0)PQY(0.0)FS(0.99)DACVHHIKRR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated NTRK1 88693.7 1 1 7107.1 7.69 HUMAN 1 16.0444 0.1638 IENTESFTLLIIPEC-p A0A0A0MTS7;T23398-p IENTESFTLLIIPEC 0.421883877305009 0.568662466865634 0.124666666666667 0.105333333333333 6.90272389100414 3.30303556616604 0.124666666666667 0.105333333333333 0.204045777000888 0.467408325051956 1.44397457102118 0.781201774393761 A0A0A0MTS7 TTN A0A0A0MTS7.T23398.p_TTN A0A0A0MTS7_T23394tS23396sT23398t_3_3_23394_23398 A0A0A0MTS7 Q8WZ42-12|A0A0A0MTS7 Titin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32626.32626.3 9.29 3.04 8.408 5 3 3 0 1090.4771 3027.5295 N23390n N23393n T23394t S23396s T23398t Hydrogen 23389 (R) AnIEntEsFtLLIIPECNRYDTGK (F) AN(0.99)IEN(0.99)T(0.99)ES(0.99)FT(0.99)LLIIPECN(0.0)RY(0.0)DT(0.0)GK C:Carbamidomethylation,K:TMT10-Lys-Only,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S TTN 4024362.5 1 19 1796.1 114.24 HUMAN 1 6.9027 3.303 IEPDPPVSHWKPEAV-p Q96HS1;S188-p IEPDPPVSHWKPEAV 0.607911536656606 0.0569149053499529 0.068 0.254666666666667 4.0038649487883 16.5870667800346 0.068 0.254666666666667 0.397753037715898 0.0219428645354826 0.917868326771128 3.17939127657195 Q96HS1 PGAM5 Q96HS1.S188.p_PGAM5 Q96HS1_S188s _1_1_188_188 Q96HS1 Q96HS1 Serine/threonine-protein phosphatase PGAM5, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22382.22382.4 14.93 14.93 14.932 3 1 1 0 894.687 3495.7585 S188s TMT10 177 (R) EGAPIEPDPPVsHWKPEAVQYYEDGAR (I) EGAPIEPDPPVS(0.99)HWKPEAVQY(0.0)Y(0.0)EDGAR K:TMT10,s:Phosphorylated S PGAM5 32232.1 1 3 2502.1 80.98 HUMAN 1 4.0039 16.5871 IEPEKQDSPPPKPPR-p Q05209;S332-p IEPEKQDSPPPKPPR 0.787969297282557 0.73575025977309 0.0446666666666667 0.033 1.99443981867932 1.83652386629304 0.0446666666666667 0.033 0.631765663283967 0.655160360745965 0.507570346059312 0.472233591980584 Q05209 PTPN12 Q05209.S332.p_PTPN12 Q05209_S332s_1_1_332_332 Q05209 Q05209|Q05209-3|Q05209-2 Tyrosine-protein phosphatase non-receptor type 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17730.17730.5 21.07 21.07 0.511 4 1 1 0 835.4348 4076.1577 N320n M321m S332s TMT10 309 (K) IADGVNEINTEnmVSSIEPEKQDsPPPKPPR (T) IADGVN(0.0)EIN(0.50)T(0.0)EN(0.50)M(1.0)VS(0.0)S(0.0)IEPEKQDS(0.99)PPPKPPR K:TMT10,n:Deamidated,m:Oxidized methionine,s:Phosphorylated S PTPN12 88960.6 11 2 644.1 254.82 HUMAN 1 1.9944 1.8365 IEPIPGESPKMFGRH-p O60841;S1168-p IEPIPGESPKMFGRH 0.96915478726984 0.928193312474012 -0.00800000000000002 0.0143333333333333 0.265822910006124 0.455799902813452 -0.00800000000000002 0.0143333333333333 0.940627581124873 0.900367913727264 -0.0780046881665698 0.13117344836413 O60841 EIF5B O60841.S1168.p_EIF5B O60841_S1168s _1_1_1168_1168 O60841 O60841|A0A087WUT6 Eukaryotic translation initiation factor 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17520.17520.4 20.3 17.08 99 1 1 1 0 748.6744 2911.7097 S1168s TMT10 1153 (K) KGQEVCVKIEPIPGEsPK (M) KGQEVCVKIEPIPGES(1.0)PK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S EIF5B 139280.8 6 13 113.1 571.22 HUMAN 1 -0.2658 0.4558 IEQHSGASQHRIARP-p Q7Z7G8;S1815-p IEQHSGASQHRIARP 0.747438924126419 0.341169944931967 0.046 -0.118333333333333 2.40089429503163 6.18543988325083 0.046 -0.118333333333333 0.575321455496442 0.240688872049886 0.595860088253834 -1.31720919177505 Q7Z7G8 VPS13B Q7Z7G8.S1815.p_VPS13B Q7Z7G8_S1815s _1_1_1815_1815 Q7Z7G8 Q7Z7G8|Q7Z7G8-6|Q7Z7G8-2 Vacuolar protein sorting-associated protein 13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7759.7759.3 10.15 10.15 1.122 2 1 1 0 633.6523 1818.9772 S1815s TMT10 1805 (R) IVQIEQHSGAsQHR (I) IVQIEQHS(0.0)GAS(0.99)QHR s:Phosphorylated S VPS13B 454589.9 2 12 766.1 229.13 HUMAN 1 2.4009 -6.1854 IEQLLGFTPSSG___-p Q96DE5;T106-p IEQLLGFTPSSG___ 0.408838439850386 0.378807505678383 0.172666666666667 0.136333333333333 7.16996412608855 5.60123666081402 0.172666666666667 0.136333333333333 0.191868458946406 0.275344454375073 1.49073296911461 1.21291547469346 Q96DE5 ANAPC16 Q96DE5.T106.p_ANAPC16 Q96DE5_T106t _1_1_106_106 Q96DE5 Q96DE5|A0A087WUN5 Anaphase-promoting complex subunit 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.35682.35682.3 11.57 11.42 1.724 3 1 1 0 720.3901 2079.189 T106t TMT10 96 (R) FKPIEQLLGFtPSSG (-) FKPIEQLLGFT(0.99)PS(0.0)S(0.0)G K:TMT10,t:Phosphorylated T ANAPC16 11723.9 1 2 4777.1 26.79 HUMAN 1 7.17 5.6012 IERLLLRSGETEPFL-p Q86UU0;S424-p IERLLLRSGETEPFL 0.204437470687119 0.686991671087421 0.278666666666667 -0.0406666666666666 13.3488795941011 2.23243305675665 0.278666666666667 -0.0406666666666666 0.0462500323226903 0.598076439613707 2.57412733562409 -0.559614328712619 Q86UU0 BCL9L Q86UU0.S424.p_BCL9L Q86UU0_S424s _1_1_424_424 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25007.25007.3 13.07 13.07 1.149 2 1 1 0 681.0551 1961.1836 S424s TMT10 420 (R) LLLRsGETEPFLK (G) LLLRS(0.99)GET(0.0)EPFLK K:TMT10,s:Phosphorylated S BCL9L 157526.3 1 8 139.1 524.37 HUMAN 1 13.3489 -2.2324 IERLRPKSPPPKSKS-p Q9HCE5;S399-p IERLRPKSPPPKSKS 0.404249781424788 0.0229741734631188 0.115333333333333 0.385333333333333 7.26475926964197 22.3702317742906 0.1170448351473 0.385333333333333 0.187725847232882 0.00579397774299805 1.50728296438253 4.40235256619124 Q9HCE5 METTL14 Q9HCE5.S399.p_METTL14 Q9HCE5_S399s _1_1_399_399 Q9HCE5 Q9HCE5 N6-adenosine-methyltransferase non-catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8157.8582.4 10.71 10.71 99 1 1 1 0 447.5276 1707.1248 S399s TMT10 395 (R) LRPKsPPPK (S) LRPKS(1.0)PPPK K:TMT10,s:Phosphorylated S METTL14 52720 9 1 6596.1 10.71 HUMAN 1 7.2648 22.3702 IERLRTHSIESSGKL-p P45985-2;S91-p IERLRTHSIESSGKL 0.0948633510902073 0.361822928209438 -0.509666666666667 0.118 21.7537626134024 5.8563961254688 -0.509666666666667 0.118 0.00667765132698593 0.259633296467243 -4.26584709896528 1.25864645901238 P45985 MAP2K4 P45985.2.S91.p_MAP2K4 P45985-2_S91s _1_1_91_91 P45985-2 P45985-2 Isoform 2 of Dual specificity mitogen-activated protein kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4042.4042.2 14.13 14.13 2.797 4 1 1 0 627.8004 1174.6265 S91s Hydrogen 89 (R) THsIESSGK (L) T(0.0)HS(0.99)IES(0.0)S(0.0)GK K:TMT10-Lys-Only,s:Phosphorylated S MAP2K4 46096.9 4 1 2899.1 66.57 HUMAN 1 -21.7538 5.8564 IERLWEDSAGEKWLY-p Q86U86;S987-p IERLWEDSAGEKWLY 0.838576080362453 0.0140483871723569 -0.067 0.376 1.47958034288785 25.6903163938463 -0.067 0.376 0.711282241266155 0.00269754290287797 -0.390197014426871 5.21402114038205 Q86U86 PBRM1 Q86U86.S987.p_PBRM1 Q86U86_S987s _1_1_987_987 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-3|Q86U86-7|Q86U86-5 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18021.18021.3 8.93 6.02 99 1 1 1 0 524.9288 1492.8048 S987s TMT10 983 (R) LWEDsAGEK (W) LWEDS(1.0)AGEK K:TMT10,s:Phosphorylated S PBRM1 194199.5 1 16 194.1 462.54 HUMAN 1 -1.4796 25.6903 IERPGEGSPMVDNPM-p A0A087WTW0;S351-p IERPGEGSPMVDNPM 0.800971890059254 0.162047602045638 0.0426666666666667 0.143333333333333 1.85512958977795 10.3924995781514 0.0426666666666667 0.143333333333333 0.652359574853169 0.0913587275755237 0.476474943034377 2.04912567733439 A0A087WTW0 NotFound A0A087WTW0.S351.p_NotFound A0A087WTW0_S351s _1_1_351_351 A0A087WTW0 A0A087WTW0|Q96T88-2|A0A087WVR3 E3 ubiquitin-protein ligase UHRF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.31640.31640.4 18.68 18.68 99 1 1 1 0 854.1926 3333.774 S351s TMT10 335 (R) IIFVDEVFKIERPGEGsPMVDNPMR (R) IIFVDEVFKIERPGEGS(1.0)PMVDNPMR K:TMT10,s:Phosphorylated S UHRF1 98273.4 22 2 1511.1 134.77 HUMAN 1 1.8551 10.3925 IERSRKGSSGNASEV-p Q69YQ0;S384-p IERSRKGSSGNASEV 0.565851304243604 0.143777248036675 0.0786666666666667 0.152 4.55776625562063 11.0960357669346 0.0786666666666667 0.152 0.3501252036494 0.0776955997235099 1.0223547089006 2.17195350219404 Q69YQ0 SPECC1L Q69YQ0.S384.p_SPECC1L Q69YQ0_S384s _1_1_384_384 Q69YQ0 Q69YQ0|Q69YQ0-2|F8WAN1 Cytospin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12269.12269.2 17.05 12.57 1.114 5 1 1 0 1081.0116 2081.0494 S384s Hydrogen 382 (R) KGsSGNASEVSVACLTER (I) KGS(0.99)S(0.0)GNAS(0.0)EVS(0.0)VACLT(0.0)ER K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S SPECC1L 124999.2 9 3 1013.1 188.73 HUMAN 1 4.5578 11.096 IESQDWAYAASKESH-p P40763;Y45-p IESQDWAYAASKESH 0.222515442905233 0.733897651899516 -0.181333333333333 0.0543333333333333 12.5556813409699 1.85234713478037 -0.181333333333333 0.0543333333333333 0.0555177511509561 0.652777665073385 -2.43130277832247 0.475795376883267 P40763 STAT3 P40763.Y45.p_STAT3 P40763_Y45y _1_1_45_45 P40763 P40763|P40763-2|P40763-3 Signal transducer and activator of transcription 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.34878.34878.3 15.55 15.55 1.356 3 1 1 0 883.7739 2569.3491 Y45y TMT10 32 (R) QFLAPWIESQDWAyAASK (E) QFLAPWIES(0.0)QDWAY(0.99)AAS(0.0)K K:TMT10,y:Phosphorylated Y STAT3 88865 1 1 2293.1 89.42 HUMAN 1 -12.5557 1.8523 IESRRPNTPYFICSI-p Q9P2R6;T120-p IESRRPNTPYFICSI 0.179459145106855 0.00326846321411953 0.211333333333333 0.797 14.726477788836 37.2494232258075 0.211333333333333 0.797 0.0336784597383453 0.000188389926819907 2.82730753848173 8.96040435659732 Q9P2R6 RERE Q9P2R6.T120.p_RERE Q9P2R6_T120t _1_1_120_120 Q9P2R6 Q9P2R6|H7BYW9 Arginine-glutamic acid dipeptide repeats protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25487.25487.3 13.78 10.42 2.412 3 1 1 0 808.7454 2344.2524 T120t TMT10 117 (R) RPNtPYFICSIQDFK (L) RPNT(0.99)PY(0.0)FICS(0.0)IQDFK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T RERE 173561.6 2 1 278.1 389.04 HUMAN 1 14.7265 37.2494 IESSDYDSSSSKGKK-p Q9UNL4;S123-p IESSDYDSSSSKGKK 0.652340833291243 0.00262293931700471 0.072 0.705666666666667 3.48042497705023 39.3012526639223 0.072 0.705666666666667 0.448701480288959 0.000117455872043721 0.816411327198688 9.82147104233783 Q9UNL4 ING4 Q9UNL4.S123.p_ING4 Q9UNL4_S123s _1_1_123_123 Q9UNL4 Q9UNL4|Q9UNL4-2|Q9UNL4-6|Q9UNL4-5|Q9UNL4-7|Q9UNL4-4|Q9UNL4-3|Q9UNL4-8 Inhibitor of growth protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9576.9576.2 15.83 12.43 1.292 7 1 1 0 985.9542 1890.9333 S123s TMT10 115 (K) QIESSDYDsSSSK (G) QIES(0.0)S(0.0)DY(0.0)DS(0.99)S(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ING4 28986.4 2 1 4257.1 34.58 HUMAN 1 3.4804 39.3013 IESVKFASAENIPDL-p P50747;S124-p IESVKFASAENIPDL 0.686263649021844 0.839223626373866 0.0663333333333333 -0.0256666666666667 3.06830586895523 1.07047131623036 0.0663333333333333 -0.0256666666666667 0.493366222709321 0.781542983367571 0.734252168557757 -0.291434199438862 P50747 HLCS P50747.S124.p_HLCS P50747_S124s _1_1_124_124 P50747 P50747 Biotin--protein ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32062.32062.3 22.49 22.49 7.44 9 1 1 0 1166.8615 3418.6012 S124s TMT10 122 (K) FAsAENIPDLPYDYSSSLESVADETSPER (E) FAS(0.99)AENIPDLPY(0.0)DY(0.0)S(0.0)S(0.0)S(0.0)LES(0.0)VADET(0.0)S(0.0)PER s:Phosphorylated S HLCS 81386.1 4 1 2840.1 68.41 HUMAN 1 3.0683 -1.0705 IETDEEESCDNAHGD-p Q96T23;S1310-p IETDEEESCDNAHGD 0.275593372930551 0.0264638389566224 -0.228333333333333 0.518666666666667 10.5910040327033 21.4098044813936 -0.228333333333333 0.518666666666667 0.0872769572019408 0.00722802343303144 -2.08460170149481 4.18398356465337 Q96T23 RSF1 Q96T23.S1310.p_RSF1 Q96T23_S1310s _1_1_1310_1310 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6302.6302.3 22.38 22.38 5.079 2 1 1 0 889.7005 2587.1164 S1310s TMT10 1303 (R) IETDEEEsCDNAHGDANQPAR (D) IET(0.0)DEEES(0.99)CDNAHGDANQPAR C:Carbamidomethylation,s:Phosphorylated S RSF1 165358.1 1 20 39.1 857.38 HUMAN 1 -10.591 21.4098 IETKFYETKEESYSP-p Q96T23;T467-p IETKFYETKEESYSP 0.167300432977981 0.0317905792361661 0.575666666666667 -0.861666666666667 15.5297981792044 20.2243380242478 0.575666666666667 -0.861666666666667 0.0279911139399313 0.00949655739969204 2.97841846787316 -3.92353788717222 Q96T23 RSF1 Q96T23.T467.p_RSF1 Q96T23_T467t _1_1_467_467 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24708.24708.5 14.29 7.17 1.167 12 1 1 0 991.1039 4871.5431 T467t TMT10 464 (K) FYEtKEESYSPSKDRNIITEGNGTESLNSVITSMK (T) FY(0.0)ET(0.99)KEES(0.0)Y(0.0)S(0.0)PS(0.0)KDRNIIT(0.0)EGNGT(0.0)ES(0.0)LNS(0.0)VIT(0.0)S(0.0)MK K:TMT10,t:Phosphorylated T RSF1 165358.1 6 4 39.1 857.38 HUMAN 1 15.5298 -20.2243 IETLKQESPNGSRKR-p Q02241;S902-p IETLKQESPNGSRKR 0.194950907975575 0.145626045947487 0.295666666666667 -0.173333333333333 13.846718314597 11.0228566304467 0.295666666666667 -0.173333333333333 0.0412409032494232 0.0790158719490341 2.6648186307988 -2.15913836312532 Q02241 KIF23 Q02241.S902.p_KIF23 Q02241_S902s _1_1_902_902 Q02241 Q02241|Q02241-2|Q02241-3 Kinesin-like protein KIF23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19395.19395.3 18.44 18.44 2.917 5 1 1 0 991.8288 2893.5056 S902s TMT10 885 (R) GGGQSVQFTDIETLKQEsPNGSR (K) GGGQS(0.0)VQFT(0.0)DIET(0.0)LKQES(0.99)PNGS(0.0)R K:TMT10,s:Phosphorylated S KIF23 111083.9 23 13 352.1 350.35 HUMAN 1 13.8467 -11.0229 IETNDTFSDEAVPES-p O60934;S604-p IETNDTFSDEAVPES 0.801750095106847 0.0293841303716813 0.0386666666666667 0.363333333333333 1.84849494740354 20.7339628118045 0.0386666666666667 0.363333333333333 0.653356935027151 0.00844507904393987 0.474982464330724 4.03431417773949 O60934 NBN O60934.S604.p_NBN O60934_S604s _1_1_604_604 O60934 O60934|A0A0C4DG07 Nibrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22574.22574.4 19.9 15.73 2.143 6 1 1 0 970.9709 3800.8991 S604s TMT10 595 (R) MDIETNDTFsDEAVPESSKISQENEIGK (K) MDIET(0.0)NDT(0.0)FS(0.99)DEAVPES(0.0)S(0.0)KIS(0.0)QENEIGK K:TMT10,s:Phosphorylated S NBN 85642.2 10 12 562.1 271.59 HUMAN 1 1.8485 20.734 IEVLSEDTDYEEDEV-p Q4LE39;T793-p IEVLSEDTDYEEDEV 0.41753786105906 0.306100986977818 0.133333333333333 0.102333333333333 7.00076510688991 6.79259837884275 0.133333333333333 0.102333333333333 0.199491083583561 0.209285992553105 1.46114713964281 1.42427567784493 Q4LE39 ARID4B Q4LE39.T793.p_ARID4B Q4LE39_S790sT793t_2_2_790_793 Q4LE39 Q4LE39|Q4LE39-2|Q4LE39-3|Q4LE39-4 AT-rich interactive domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24781.24781.3 15.01 15.01 1.806 4 2 2 0 916.4019 2587.2551 S790s T793t TMT10 785 (K) DIEVLsEDtDYEEDEVTK (K) DIEVLS(0.99)EDT(0.99)DY(0.0)EEDEVT(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T ARID4B 148890.9 10 21 191.1 463.89 HUMAN 1 7.0008 6.7926 IEYRLERSPVDESGD-p Q8WX93;S979-p IEYRLERSPVDESGD 0.390683136668508 0.0883853079150403 0.120666666666667 0.234666666666667 7.54216506306958 13.9438659130122 0.120666666666667 0.234666666666667 0.176109787763396 0.0403286244113572 1.55562161335917 2.6810174797566 Q8WX93 PALLD Q8WX93.S979.p_PALLD Q8WX93_S979s _1_1_979_979 Q8WX93 Q8WX93|Q8WX93-5|Q8WX93-9|Q8WX93-2|Q8WX93-3|Q8WX93-8|Q8WX93-4 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30923.30923.5 24.01 24.01 1.238 3 1 1 0 802.7756 3929.8978 S979s TMT10 976 (R) LERsPVDESGDEVQYGDVPVENGMAPFFEMK (L) LERS(0.99)PVDES(0.0)GDEVQY(0.0)GDVPVENGMAPFFEMK K:TMT10,s:Phosphorylated S PALLD 151930.4 11 9 338.1 354.43 HUMAN 1 7.5422 13.9439 IFDTDDRSQTILPLV-p Q6NUP7;S288-p IFDTDDRSQTILPLV 0.127767258653097 0.0970339410401999 -0.366666666666667 -0.281666666666667 18.5128838026274 13.3942881847098 -0.366666666666667 -0.281666666666667 0.0140835331296627 0.0457689744787392 -3.5668170582235 -2.58089653250199 Q6NUP7 PPP4R4 Q6NUP7.S288.p_PPP4R4 Q6NUP7_S288sT290t_2_2_288_290 Q6NUP7 Q6NUP7 Serine/threonine-protein phosphatase 4 regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.35367.35367.4 7.93 2.43 1.127 6 2 2 0 1071.0261 4120.2015 N277n S288s T290t Hydrogen 262 (R) DEGSSVRLAAFETLVnLLDIFDTDDRsQtILPLVK (S) DEGS(0.0)S(0.0)VRLAAFET(0.0)LVN(1.0)LLDIFDT(0.0)DDRS(0.99)QT(0.99)ILPLVK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S,t:Phosphorylated T PPP4R4 100534.2 1 5 3685.1 45.41 HUMAN 1 -18.5129 -13.3943 IFEANSDSDQQSETK-p Q99549-2;S138-p IFEANSDSDQQSETK 0.371156743394989 0.00488459422585612 0.123 0.576333333333333 7.98268860019189 33.7471878661966 0.123 0.576333333333333 0.159122333854801 0.000421969647817774 1.63215738953142 7.64420097057574 Q99549 MPHOSPH8 Q99549.2.S138.p_MPHOSPH8 Q99549-2_S136sS138s_2_2_136_138 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24313.24313.4 25.5 24.05 5.371 7 2 2 0 965.9529 3699.844 N135n S136s S138s TMT10 125 (R) LSLNNDIFEAnsDsDQQSETKEDTSPK (K) LS(0.0)LN(0.0)N(0.0)DIFEAN(0.99)S(0.99)DS(0.99)DQQS(0.0)ET(0.0)KEDT(0.0)S(0.0)PK K:TMT10,n:Deamidated,s:Phosphorylated S MPHOSPH8 98148.4 14 19 242.1 413.34 HUMAN 1 7.9827 33.7472 IFEDSDDSEPGGPPA-p Q9UMN6;S1095-p IFEDSDDSEPGGPPA 0.643656746243604 0.240660550926398 -0.0663333333333333 0.118333333333333 3.57715650523545 8.15036935602075 -0.0663333333333333 0.118333333333333 0.438817914882457 0.153095725226223 -0.835387484530999 1.66069920506743 Q9UMN6 KMT2B Q9UMN6.S1095.p_KMT2B Q9UMN6_S1092sS1095s_2_2_1092_1095 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20251.20251.3 17.2 17.2 17.201 4 2 2 0 974.4128 2761.2903 S1092s S1095s TMT10 1082 (K) QRPSYDIFEDsDDsEPGGPPAPR (R) QRPS(0.0)Y(0.0)DIFEDS(0.99)DDS(0.99)EPGGPPAPR s:Phosphorylated S KMT2B 297845.7 4 22 388.1 332.76 HUMAN 1 -3.5772 8.1504 IFENIKDSDKMLSFR-p Q8TDM6;S814-p IFENIKDSDKMLSFR 0.242519541519085 0.00775531376968322 -0.270666666666667 0.513333333333333 11.769601010463 30.121054249435 -0.270666666666667 0.513333333333333 0.0665334278143863 0.000972511118140904 -2.29153368103048 6.45874735164174 Q8TDM6 DLG5 Q8TDM6.S814.p_DLG5 Q8TDM6_S814s _1_1_814_814 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27744.27744.3 19.44 17.97 3.465 5 1 1 0 1094.2195 3200.6831 S814s TMT10 795 (K) VFPQSSSWSGQNIFENIKDsDK (M) VFPQS(0.0)S(0.0)S(0.0)WS(0.0)GQNIFENIKDS(0.99)DK K:TMT10,s:Phosphorylated S DLG5 215575.4 3 14 34.1 890.58 HUMAN 1 -11.7696 30.1211 IFEYLDRTPRCPPSG-p Q03518;T545-p IFEYLDRTPRCPPSG 0.424703032265256 0.249251260359942 -0.189666666666667 -0.130666666666667 6.85521121486517 7.94916937199168 -0.189666666666667 -0.130666666666667 0.206290333758884 0.160355205539321 -1.43564413508023 -1.62582971105661 Q03518 TAP1 Q03518.T545.p_TAP1 Q03518_T545t _1_1_545_545 Q03518 Q03518|A0A140T9T7 Antigen peptide transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21913.21913.3 14.28 9.72 5.863 2 1 1 0 540.278 1538.8528 T545t TMT10 538 (K) IFEYLDRtPR (C) IFEY(0.0)LDRT(0.99)PR t:Phosphorylated T TAP1 87786.6 3 1 6067.1 14.28 HUMAN 1 -6.8552 -7.9492 IFIGPPPSAIRDMGI-p Q96RQ3;S155-p IFIGPPPSAIRDMGI 0.549625979110013 0.0448317344304111 -0.253333333333333 0.583333333333333 4.79885517289957 18.0483788974064 -0.253333333333333 0.583333333333334 0.331218421198985 0.0156733600462126 -1.06706498695059 3.46921307614211 Q96RQ3 MCCC1 Q96RQ3.S155.p_MCCC1 Q96RQ3_S155s _1_1_155_155 Q96RQ3 Q96RQ3|E9PHF7|G5E9X5 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28208.28208.3 15.78 15.78 99 1 1 1 0 635.3478 1824.0581 S155s TMT10 144 (K) QEGIIFIGPPPsAIR (D) QEGIIFIGPPPS(1.0)AIR s:Phosphorylated S MCCC1 80985.1 1 1 3272.1 55.27 HUMAN 1 -4.7989 18.0484 IFKILENSEDSSPEC-p A0A0B4J1V9;S875-p IFKILENSEDSSPEC 0.787307528272418 0.592359219089113 -0.0456666666666667 0.0513333333333334 2.00530742715725 3.07728988114246 -0.0456666666666667 0.0513333333333334 0.630186734930436 0.492346677916175 -0.509977087466482 0.735962662345729 A0A0B4J1V9 HELLS A0A0B4J1V9.S875.p_HELLS A0A0B4J1V9_S875s _1_1_875_875 A0A0B4J1V9 A0A0B4J1V9|Q9NRZ9|Q9NRZ9-2|Q9NRZ9-3|Q9NRZ9-5|F6XU50|Q9NRZ9-6|A0A087WSW7 Helicase, lymphoid-specific, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.32766.32766.2 10.53 10.53 1.188 3 1 1 0 974.9235 1868.8785 S875s TMT10 871 (K) ILENsEDSSPECLF (-) ILENS(0.99)EDS(0.0)S(0.0)PECLF C:Carbamidomethylation,s:Phosphorylated S HELLS 103341.1 2 6 2348.1 87.11 HUMAN 1 -2.0053 3.0773 IFKLTYLSNHDYKHL-p Q9BPZ7;S459-p IFKLTYLSNHDYKHL 0.169558691409461 0.00756903109707508 -0.292333333333333 -0.495 15.3749678402451 30.3040369683356 -0.292333333333333 -0.495 0.0290070267848295 0.000932387200771661 -2.94907703076714 -6.51469923956147 Q9BPZ7 MAPKAP1 Q9BPZ7.S459.p_MAPKAP1 Q9BPZ7_S459s _1_1_459_459 Q9BPZ7 Q9BPZ7|Q9BPZ7-2|Q9BPZ7-3 Target of rapamycin complex 2 subunit MAPKAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15769.15769.3 13.63 10.74 3.591 4 1 1 0 597.974 1711.9419 S459s TMT10 455 (K) LTYLsNHDYK (H) LT(0.0)Y(0.0)LS(0.99)NHDY(0.0)K K:TMT10,s:Phosphorylated S MAPKAP1 59578.2 1 6 1906.1 108.05 HUMAN 1 -15.375 -30.304 IFLEDFCSPRQVAEA-p Q9H6L4;S169-p IFLEDFCSPRQVAEA 0.961237221279543 0.222160885992164 -0.011 -0.174333333333333 0.329977658940891 8.60357495859288 -0.011 -0.174333333333333 0.926834591207169 0.137924844863752 -0.0961862093247237 -1.73914393039733 Q9H6L4 ARMC7 Q9H6L4.S169.p_ARMC7 Q9H6L4_S169s _1_1_169_169 Q9H6L4 Q9H6L4 Armadillo repeat-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36217.36217.3 16.35 16.35 99 1 1 1 0 673.6597 1938.9945 S169s TMT10 158 (R) NLAQIFLEDFCsPR (Q) NLAQIFLEDFCS(1.0)PR C:Carbamidomethylation,s:Phosphorylated S ARMC7 22209 1 1 5780.1 16.35 HUMAN 1 -0.33 -8.6036 IFLRELISNASDALD-p P08238;S45-p IFLRELISNASDALD 0.778557647075084 0.0508134767999901 -0.06 -0.257666666666667 2.08852490282102 17.2835365194837 -0.06 -0.257666666666667 0.61822634733413 0.0186915943832499 -0.528318472710304 -3.31611034472832 P08238 HSP90AB1 P08238.S45.p_HSP90AB1 P08238_S45s _1_1_45_45 P08238 P14625|P08238|Q96GW1|A0A1W2PRR1 Heat shock protein HSP 90-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21956.21956.3 9.16 9.16 1.679 2 1 1 0 605.3186 1733.9686 S45s TMT10 42 (R) ELIsNASDALDK (I) ELIS(0.99)NAS(0.0)DALDK K:TMT10,s:Phosphorylated S HSP90AB1 83605 1 25 43.2 810.87 HUMAN 1 -2.0885 -17.2835 IFNKVEVSEDEPASK-p O75683;S206-p IFNKVEVSEDEPASK 0.845998718758797 0.264138556188035 0.0296666666666667 -0.117666666666667 1.40544987772253 7.61650914811012 0.0296666666666667 -0.117666666666667 0.72352744951105 0.173120734171433 0.372701532785799 -1.56808327700765 O75683 SURF6 O75683.S206.p_SURF6 O75683_S206s _1_1_206_206 O75683 O75683 Surfeit locus protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22021.22021.3 15.78 14.43 8.068 2 1 1 0 908.4705 2643.4282 S206s Hydrogen 194 (R) EPPGLIFNKVEVsEDEPASK (A) EPPGLIFNKVEVS(0.99)EDEPAS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S SURF6 41563.8 6 3 2253.1 91.2 HUMAN 1 1.4054 -7.6165 IFNLTHISAEKRKDK-p Q14687;S876-p IFNLTHISAEKRKDK 0.371221676120467 0.309710097613557 0.141333333333333 -0.154 7.98108591897309 6.72744073707808 0.141333333333333 -0.154 0.159181065763208 0.21244960418512 1.63187933857683 -1.41283842042145 Q14687 GSE1 Q14687.S876.p_GSE1 Q14687_S876s _1_1_876_876 Q14687 Q14687|Q14687-3|Q14687-2 Genetic suppressor element 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.33979.33979.3 17.42 17.42 2.979 3 1 1 0 724.7339 2092.2207 S876s TMT10 866 (K) FLTIFNLTHIsAEK (R) FLT(0.0)IFNLT(0.0)HIS(0.99)AEK K:TMT10,s:Phosphorylated S GSE1 136446.7 1 13 221.1 428.09 HUMAN 1 7.9811 -6.7274 IFPLFMKSPRKIKKV-p A0A087WUB9;S394-p IFPLFMKSPRKIKKV 0.0750547208120352 0.0609514255924537 0.460666666666667 -0.247333333333333 24.0711436501974 16.1853138299661 0.460666666666667 -0.247333333333333 0.0039163873126786 0.0240695858107617 4.81230778079988 -3.1016306778857 A0A087WUB9 NotFound A0A087WUB9.S394.p_NotFound A0A087WUB9_S394s _1_1_394_394 A0A087WUB9 A0A087WUB9|Q8WYA6|Q8WYA6-4|Q8WYA6-2|Q8WYA6-3 Beta-catenin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28701.28701.3 14.04 10.04 8.174 2 1 1 0 625.6843 1795.0705 S394s TMT10 386 (R) TIFPLFMKsPR (K) T(0.0)IFPLFMKS(0.99)PR K:TMT10,s:Phosphorylated S CTNNBL1 66158.3 6 1 2830.1 68.78 HUMAN 1 24.0711 -16.1853 IFQERDPSKIKWGDA-p P04406;S83-p IFQERDPSKIKWGDA 0.176240941475 0.00638262730764488 -0.492 0.489333333333333 14.9719338167166 31.5785415656458 -0.492 0.489333333333333 0.0318277998502621 0.000695257757709054 -2.87318899155503 6.91542345728547 P04406 GAPDH P04406.S83.p_GAPDH P04406_S83s _1_1_83_83 P04406 P04406|P04406-2 Glyceraldehyde-3-phosphate dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24058.24058.5 16.58 15.66 1.127 2 1 1 0 662.3672 3227.8355 S83s TMT10 62 (K) AENGKLVINGNPITIFQERDPsK (I) AENGKLVINGNPIT(0.0)IFQERDPS(0.99)K K:TMT10,s:Phosphorylated S GAPDH 36223.7 16 2 1327.1 153.64 HUMAN 1 -14.9719 31.5785 IFRRRNESPGAPPAG-p P49796;S1044-p IFRRRNESPGAPPAG 0.699126902533387 0.00778126970624509 -0.0693333333333333 -0.68 2.92119854985962 30.0967828582052 -0.0693333333333334 -0.68 0.510364132131329 0.000977961401342552 -0.704360880260685 -6.45135482636563 P49796 RGS3 P49796.S1044.p_RGS3 P49796_S1044s _1_1_1044_1044 P49796 P49796|P49796-6|P49796-4|P49796-9|P49796-1|P49796-8|P49796-7|P49796-2|A0A087WUY2|H7BXY1 Regulator of G-protein signaling 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5400.5400.4 13.77 13.77 99 1 1 1 0 566.311 2182.2547 S1044s TMT10 1041 (R) RNEsPGAPPAGKADK (M) RNES(1.0)PGAPPAGKADK K:TMT10,s:Phosphorylated S RGS3 134216.1 2 11 1029.1 186.27 HUMAN 1 -2.9212 -30.0968 IFSNQPDSPISASQD-p O75161;S142-p IFSNQPDSPISASQD 0.849932017970877 0.865842304013024 0.0306666666666666 -0.0203333333333333 1.36740038400942 0.881318555664947 0.0306666666666667 -0.0203333333333333 0.729894282341335 0.816334487509289 0.363657022475812 -0.243813988088005 O75161 NPHP4 O75161.S142.p_NPHP4 O75161_S142s _1_1_142_142 O75161 O75161|O75161-2|D6RA06 Nephrocystin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20231.20231.3 14.26 14.26 3.782 4 1 1 0 758.0472 2192.1599 S142s TMT10 135 (R) IFSNQPDsPISASQDK (R) IFS(0.0)NQPDS(0.99)PIS(0.0)AS(0.0)QDK K:TMT10,s:Phosphorylated S NPHP4 158850.4 4 1 3191.1 58.08 HUMAN 1 1.3674 -0.8813 IFVLKAVSTLIDSLK-p A0A286YFF8;S1651-p IFVLKAVSTLIDSLK 0.566691167495734 0.0533323245684845 -0.113 -0.235666666666667 4.54325688901004 16.9772090167033 -0.113 -0.235666666666667 0.351296894902059 0.0200576061061798 -1.01965017079324 -3.25567064007579 A0A286YFF8 NotFound A0A286YFF8.S1651.p_NotFound A0A286YFF8_T1641tS1651sS1656s_3_3_1641_1656 A0A286YFF8 A0A286YFF8|Q7Z3U7 Protein MON2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17596.17596.4 7.9 7.9 7.901 4 3 3 0 917.4837 3427.0162 T1641t S1651s S1656s Hydrogen 1633 (K) CPLPRQQVtEIIFVLKAVsTLIDsLK (K) CPLPRQQVT(0.99)EIIFVLKAVS(0.99)T(0.0)LIDS(0.99)LK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S MON2 192594.7 1 6 1105.1 176.81 HUMAN 1 -4.5433 -16.9772 IFYSGPASPARPRYR-p Q6PL18;S327-p IFYSGPASPARPRYR 0.568417101345875 0.0327671391249166 0.112666666666667 -0.645333333333333 4.51441683617299 20.0298686235917 0.112666666666667 -0.645333333333333 0.353637503802396 0.00993146091168038 1.01426957612903 -3.88172421402869 Q6PL18 ATAD2 Q6PL18.S327.p_ATAD2 Q6PL18_S327s _1_1_327_327 Q6PL18 Q6PL18|Q6PL18-2 ATPase family AAA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14024.14024.4 16.32 16.32 2.776 3 1 1 0 574.8148 2216.2704 S327s TMT10 317 (R) KPNIFYSGPAsPARPR (Y) KPNIFY(0.0)S(0.0)GPAS(0.99)PARPR K:TMT10,s:Phosphorylated S ATAD2 159920.6 11 5 266.1 395.28 HUMAN 1 4.5144 -20.0299 IFYYEDDSEGEDIEK-p Q15361;S872-p IFYYEDDSEGEDIEK 0.108085133456159 0.0198443191079062 -0.615666666666667 0.350333333333333 20.3057962831902 23.353770332583 -0.615666666666667 0.350333333333333 0.00932009569806382 0.00461979778973854 -3.94488705349293 4.63326721002707 Q15361 TTF1 Q15361.S872.p_TTF1 Q15361_S872s _1_1_872_872 Q15361 Q15361|A0A087WY09 Transcription termination factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32045.32045.4 20.75 20.75 8.407 3 1 1 0 820.6351 3199.5512 S872s TMT10 858 (K) QVFPFRDIFYYEDDsEGEDIEK (E) QVFPFRDIFY(0.0)Y(0.0)EDDS(0.99)EGEDIEK K:TMT10,s:Phosphorylated S TTF1 103505.6 6 6 1295.1 156.82 HUMAN 1 -20.3058 23.3538 IFYYFSNSPSKRLRE-p Q08999;S1080-p IFYYFSNSPSKRLRE 0.0469412164037233 0.000952253650599092 -0.503333333333333 -1.34266666666667 29.499457312769 53.498089605585 -0.503333333333333 -1.34266666666667 0.00112215866864015 4.46880124593529e-06 -6.28126617092843 -18.2498076052299 Q08999 RBL2 Q08999.S1080.p_RBL2 Q08999_S1080s _1_1_1080_1080 Q08999 Q08999|Q08999-2 Retinoblastoma-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28994.28994.2 17.17 17.17 2 5 1 1 0 945.9758 1810.978 S1080s TMT10 1073 (K) IFYYFSNsPSK (R) IFY(0.0)Y(0.0)FS(0.0)NS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S RBL2 129790.7 8 15 408.1 323.79 HUMAN 1 -29.4995 -53.4981 IGAILERSIDMDRGF-p A0A0A0MQW0;S474-p IGAILERSIDMDRGF 0.334308576365518 0.0985205467728746 -0.222 -0.183 8.8815944862674 13.3054578176218 -0.222 -0.183 0.129372077238654 0.0467147703545531 -1.78786643385937 -2.56481031484657 A0A0A0MQW0 NotFound A0A0A0MQW0.S474.p_NotFound A0A0A0MQW0_S474s _1_1_474_474 A0A0A0MQW0 A0A0A0MR39|Q9P2K5-2|A0A0A0MQW0|A0A087WUT0|A0A0C4DGV1|Q9P2K5-3 Myelin expression factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25003.25003.3 20.42 16.3 99 1 1 1 0 714.0209 2060.083 S474s TMT10 463 (R) MGPGIGAILERsIDMDR (G) MGPGIGAILERS(1.0)IDMDR s:Phosphorylated S MYEF2 62184.4 7 6 670.1 249.19 HUMAN 1 -8.8816 -13.3055 IGDIFVHSPQRGLHP-p Q9P2F8;S148-p IGDIFVHSPQRGLHP 0.285328406473615 0.0955923433701338 -0.155333333333333 -0.384 10.2784090293639 13.4831916563708 -0.155333333333333 -0.384 0.0937905531178781 0.0448415725387556 -2.03012385030039 -2.59702226060153 Q9P2F8 SIPA1L2 Q9P2F8.S148.p_SIPA1L2 Q9P2F8_S148s _1_1_148_148 Q9P2F8 Q9P2F8 Signal-induced proliferation-associated 1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22480.22480.3 16.96 16.96 5.815 3 1 1 0 614.6443 1761.9485 S148s TMT10 139 (K) YTIGDIFVHsPQR (G) Y(0.0)T(0.0)IGDIFVHS(0.99)PQR s:Phosphorylated S SIPA1L2 192488.1 2 2 322.1 363.46 HUMAN 1 -10.2784 -13.4832 IGEFFRLSPKDSEKE-p H0YMA4;S72-p IGEFFRLSPKDSEKE 0.152872172873321 0.00187523755214301 -0.441333333333333 -1.144 16.4039060110676 42.8383216042417 -0.441333333333333 -1.144 0.0228880819034437 5.20196995574117e-05 -3.14613373048052 -11.4847249947924 H0YMA4 NotFound H0YMA4.S72.p_NotFound H0YMA4_S72s _1_1_72_72 H0YMA4 A0A0U1RQM0|H0YMA4|Q15004|H0YKX3 HCG2039386, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26433.26433.3 12.29 6.7 99 1 1 1 0 596.9985 1709.015 S72s TMT10 64 (K) GIGEFFRLsPK (D) GIGEFFRLS(1.0)PK K:TMT10,s:Phosphorylated S PCLAF 12454.7 7 2 3368.1 52.78 HUMAN 1 -16.4039 -42.8383 IGGAQNRSYSKLLCG-p P14174;S75-p IGGAQNRSYSKLLCG 0.28377835512685 0.402181922680767 0.314666666666667 0.22 10.3245501550799 5.26186030657606 0.314666666666667 0.22 0.0927993607303171 0.297724085090744 2.03815665086001 1.15159290989995 P14174 MIF P14174.S75.p_MIF P14174_S75s _1_1_75_75 P14174 P14174 Macrophage migration inhibitory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7932.7932.3 9.14 9.14 9.139 3 1 1 0 573.6375 1638.9328 S75s TMT10 68 (K) IGGAQNRsYSK (L) IGGAQNRS(0.99)Y(0.0)S(0.0)K K:TMT10,s:Phosphorylated S MIF 12647.2 2 2 5888.1 15.61 HUMAN 1 10.3246 5.2619 IGGDAGTSLNSNDYG-p Q96AE4;S52-p IGGDAGTSLNSNDYG 0.249575345148254 0.095306879869011 -0.396333333333333 0.261333333333333 11.5031359564383 13.5022736102536 -0.396333333333333 0.261333333333333 0.0707434774945865 0.0446449806402925 -2.24450180968128 2.60048689880773 Q96AE4 FUBP1 Q96AE4.S52.p_FUBP1 Q96AE4_S52s _1_1_52_52 Q96AE4 E9PEB5|Q96AE4-2 Far upstream element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16490.16490.2 15.05 15.05 1.101 5 1 1 0 1256.593 2432.2094 S52s TMT10 45 (K) IGGDAGTsLNSNDYGYGGQK (R) IGGDAGT(0.0)S(0.99)LNS(0.0)NDY(0.0)GY(0.0)GGQK K:TMT10,s:Phosphorylated S FUBP1 67730.3 4 2 1157.1 171.64 HUMAN 1 -11.5031 13.5023 IGGDMMDSLISQLQP-p O60244;S995-p IGGDMMDSLISQLQP 0.123350251698765 0.573345644719038 -0.315666666666667 -0.065 18.9273859087834 3.25697859655417 -0.315666666666667 -0.065 0.0128015161699877 0.472391571607121 -3.65244314587019 -0.772027464776639 O60244 MED14 O60244.S995.p_MED14 O60244_S986sS995s_2_2_986_995 O60244 O60244 Mediator of RNA polymerase II transcription subunit 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36664.36664.5 10.67 10.67 1.211 4 2 2 0 885.2007 4262.115 S986s S995s TMT10 977 (R) SVNEDDNPPsPIGGDMMDsLISQLQPPPQQQPFPK (Q) S(0.0)VNEDDNPPS(0.99)PIGGDMMDS(0.99)LIS(0.0)QLQPPPQQQPFPK K:TMT10,s:Phosphorylated S MED14 162087.1 5 7 1597.1 128.88 HUMAN 1 -18.9274 -3.257 IGGRAVETPPLSSVN-p Q14C86-6;T390-p IGGRAVETPPLSSVN 0.490692853704506 0.267132727781317 0.093 0.129333333333333 5.69725186228074 7.54884483898243 0.093 0.129333333333333 0.269323849793448 0.17583912586113 1.23043797695407 1.5563197335991 Q14C86 GAPVD1 Q14C86.6.T390.p_GAPVD1 Q14C86-6_T390t _1_1_390_390 Q14C86-6 Q14C86-6|Q14C86-2|Q14C86-5|F8W9S7|B4DGD8|A0A0A0MQV8|B0QZ65 Isoform 6 of GTPase-activating protein and VPS9 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.31789.31789.3 16.17 13.82 3.853 4 1 1 0 731.0593 2111.191 T390t TMT10 387 (R) AVEtPPLSSVNLLEGLSR (T) AVET(0.99)PPLS(0.0)S(0.0)VNLLEGLS(0.0)R t:Phosphorylated T GAPVD1 167648.8 2 2 268.1 394.98 HUMAN 1 5.6973 7.5488 IGGSAPIYVKNILPR-p Q8TEW0;Y489-p IGGSAPIYVKNILPR 0.252409750747624 0.00380739829841935 -0.165333333333333 -0.666 11.4048345312205 35.8605870652756 -0.165333333333333 -0.666 0.0723629972487181 0.000259382871301864 -2.22719117304757 -8.41648526769074 Q8TEW0 PARD3 Q8TEW0.Y489.p_PARD3 Q8TEW0_Y489y _1_1_489_489 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11|Q8TEW0-4|Q8TEW0-6|Q5VWV2|Q8TEW0-7|Q8TEW0-3|Q8TEW0-5|Q8TEW0-8|Q5VWU8|Q8TEW0-10|Q8TEW0-9 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21999.21999.3 19.71 19.71 9.798 3 1 1 0 620.0101 1778.0464 Y489y TMT10 479 (R) DVTIGGSAPIyVK (N) DVT(0.0)IGGS(0.0)APIY(0.99)VK K:TMT10,y:Phosphorylated Y PARD3 151933.9 1 10 65.1 692.2 HUMAN 1 -11.4048 -35.8606 IGHRSVDSSGETTYK-p Q99755;S71-p IGHRSVDSSGETTYK 0.707300754116743 0.207208160030084 -0.055 0.125666666666667 2.82771096852377 8.99259035695122 -0.055 0.125666666666667 0.521469489074586 0.126107513978042 -0.685195806566686 1.80643093485361 Q99755 PIP5K1A Q99755.S71.p_PIP5K1A Q99755_S68sS71s_2_2_68_71 Q99755 Q99755|A6PW57|Q99755-3|Q99755-4|Q99755-2 Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8796.8796.2 12.31 12.31 1.665 6 2 2 0 960.4471 1759.9478 S68s S71s Hydrogen 68 (R) sVDsSGETTYKK (T) S(0.99)VDS(0.99)S(0.0)GET(0.0)T(0.0)Y(0.0)KK K:TMT10-Lys-Only,s:Phosphorylated S PIP5K1A 63088.6 1 4 3553.1 48.31 HUMAN 1 -2.8277 8.9926 IGIHHKNSPPKVTVP-p Q8N302;S329-p IGIHHKNSPPKVTVP 0.135600070487343 0.420211788507026 -0.548666666666667 0.117333333333333 17.7973973793932 5.01319916196847 -0.548666666666667 0.117333333333333 0.0166058175534392 0.315268139465007 -3.42137792101165 1.10625229041841 Q8N302 AGGF1 Q8N302.S329.p_AGGF1 Q8N302_S329s _1_1_329_329 Q8N302 Q8N302 Angiogenic factor with G patch and FHA domains 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6391.6391.4 15.74 12.99 99 1 1 1 0 499.5429 1915.1845 S329s TMT10 322 (K) IGIHHKNsPPK (V) IGIHHKNS(1.0)PPK K:TMT10,s:Phosphorylated S AGGF1 81375.2 1 4 1509.1 135.25 HUMAN 1 -17.7974 5.0132 IGIPQFHSPVGSPLK-p Q16659;S684-p IGIPQFHSPVGSPLK 0.0350618685416583 0.0016237919479163 -0.663333333333333 -0.919333333333333 33.8858724683723 44.4592944432611 -0.663333333333334 -0.919333333333333 0.000408707637250816 3.58154618334362e-05 -7.70725169493161 -12.3311476540101 Q16659 MAPK6 Q16659.S684.p_MAPK6 Q16659_S684s _1_1_684_684 Q16659 Q16659 Mitogen-activated protein kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25838.25838.3 21.31 21.31 5.419 3 1 1 0 858.1378 2492.4277 S684s TMT10 673 (K) QLESIGIPQFHsPVGSPLK (S) QLES(0.0)IGIPQFHS(0.99)PVGS(0.0)PLK K:TMT10,s:Phosphorylated S MAPK6 83306.9 2 5 2324.1 87.84 HUMAN 1 -33.8859 -44.4593 IGKFISGTPRRKLPQ-p Q9Y4B6;T706-p IGKFISGTPRRKLPQ 0.183896650188356 0.00224652614039878 -0.275666666666667 -1.37 14.4595537627281 41.0783533314328 -0.275666666666667 -1.37 0.0358133233376502 7.80125846540748e-05 -2.77769114363248 -10.627187004121 Q9Y4B6 VPRBP Q9Y4B6.T706.p_VPRBP Q9Y4B6_T706t _1_1_706_706 Q9Y4B6 Q9Y4B6|Q9Y4B6-2|Q9Y4B6-3 DDB1- and CUL4-associated factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12804.12804.2 10.9 2.16 2.159 2 1 1 0 543.7813 1006.5883 T706t TMT10 702 (K) FISGtPR (R) FIS(0.0)GT(0.99)PR t:Phosphorylated T DCAF1 170772.9 3 3 1102.1 177.43 HUMAN 1 -14.4596 -41.0784 IGKKRKCSPSSSSIN-p O15265-2;S840-p IGKKRKCSPSSSSIN 0.960151061343344 0.758315518641896 0.00800000000000001 -0.0366666666666666 0.341433024250636 1.65909555010605 0.00800000000000001 -0.0366666666666667 0.924393105288822 0.682480810943012 0.0994082239500398 -0.43186187265642 O15265 ATXN7 O15265.2.S840.p_ATXN7 O15265-2_S840s _1_1_840_840 O15265-2 O15265-2|O15265-3 Isoform b of Ataxin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7983.7983.3 15.57 10.4 1.566 9 1 1 0 845.7633 2455.3066 S840s TMT10 839 (K) CsPSSSSINNSSSKPTK (V) CS(0.99)PS(0.0)S(0.0)S(0.0)S(0.0)INNS(0.0)S(0.0)S(0.0)KPT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATXN7 102365.1 2 4 2096.1 97.83 HUMAN 1 0.3414 -1.6591 IGKSVKTSPTTQSKH-p Q5UIP0;S2243-p IGKSVKTSPTTQSKH 0.977130047691108 0.000993050805672115 -0.005 -2.00066666666667 0.198599420522808 52.5506514409974 -0.00499999999999999 -2.00066666666667 0.955300616349124 5.55820877978271e-06 -0.0586963951034502 -17.5197782334562 Q5UIP0 RIF1 Q5UIP0.S2243.p_RIF1 Q5UIP0_S2243s _1_1_2243_2243 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7200.7200.3 7.36 7.36 7.362 6 1 1 0 644.3657 1851.1154 S2243s TMT10 2239 (K) SVKTsPTTQSK (H) S(0.0)VKT(0.0)S(0.99)PT(0.0)T(0.0)QS(0.0)K K:TMT10,s:Phosphorylated S RIF1 276628.8 2 33 29.1 922.06 HUMAN 1 -0.1986 -52.5507 IGLDGCYSE______-p Q8NB46;S1075-p IGLDGCYSE______ 0.310437125148025 0.00508122719502233 0.146333333333333 -0.596333333333333 9.49596626539033 33.4129604815545 0.146333333333333 -0.596333333333334 0.112306107108727 0.000455726152430928 1.89425918309647 -7.52783759256087 Q8NB46 ANKRD52 Q8NB46.S1075.p_ANKRD52 Q8NB46_S1075s _1_1_1075_1075 Q8NB46 Q8NB46 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17512.17512.4 26.17 20.76 1.789 6 1 1 0 908.9015 3552.6144 S1075s TMT10 1045 (K) TVGGCGALPHGASCPYSQERPGAIGLDGCYsE (-) T(0.0)VGGCGALPHGAS(0.0)CPY(0.0)S(0.0)QERPGAIGLDGCY(0.0)S(0.99)E C:Carbamidomethylation,s:Phosphorylated S ANKRD52 116900.4 2 2 4063.1 38.31 HUMAN 1 9.496 -33.413 IGLENLDSPAATKAQ-p O75165;S2151-p IGLENLDSPAATKAQ 0.473498904022036 0.741058532638945 -0.139 -0.0463333333333333 5.97986331380417 1.79476136035528 -0.139 -0.0463333333333333 0.252356019564375 0.661490884621612 -1.28097555296936 -0.462803226579426 O75165 DNAJC13 O75165.S2151.p_DNAJC13 O75165_S2151s _1_1_2151_2151 O75165 O75165 DnaJ homolog subfamily C member 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30829.30829.3 17.74 17.74 7.953 2 1 1 0 760.4163 2199.2637 S2151s TMT10 2140 (K) LLEGIGLENLDsPAATK (A) LLEGIGLENLDS(0.99)PAAT(0.0)K K:TMT10,s:Phosphorylated S DNAJC13 256692.5 1 3 4562.1 29.81 HUMAN 1 -5.9799 -1.7948 IGNARSSSPVQVEEE-p Q8IZ21;S118-p IGNARSSSPVQVEEE 0.738211771043618 0.907217183601252 0.08 -0.034 2.50015491406508 0.591908808897383 0.08 -0.0339999999999999 0.56232126667462 0.872587764763213 0.616921901217259 -0.168112452384442 Q8IZ21 PHACTR4 Q8IZ21.S118.p_PHACTR4 Q8IZ21_S118s _1_1_118_118 Q8IZ21 Q8IZ21-2|Q8IZ21-3 Phosphatase and actin regulator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10931.10931.2 10.79 6.33 1.382 3 1 1 0 876.4316 1671.8751 S118s TMT10 116 (R) SSsPVQVEEEPVR (L) S(0.0)S(0.0)S(0.99)PVQVEEEPVR s:Phosphorylated S PHACTR4 78438 8 3 350.1 351.04 HUMAN 1 2.5002 -0.5919 IGNSNHGSQSPRNVE-p Q03112-3;S1046-p IGNSNHGSQSPRNVE 0.342075757494071 0.858074022295887 0.191333333333333 0.03 8.65621206980655 0.935831842784229 0.191333333333333 0.03 0.13626326568219 0.806151777158003 1.74885219604345 0.257678988285499 Q03112 MECOM Q03112.3.S1046.p_MECOM Q03112-3_S1046sS1048s_2_2_1046_1048 Q03112-3 Q03112-3|E7EQ57|Q03112-4|A0A0C3SFZ7|Q03112-6 Isoform 2 of MDS1 and EVI1 complex locus protein EVI1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8943.8943.3 8.94 8.94 8.937 3 2 2 0 635.2743 1743.8724 S1046s S1048s TMT10 1037 (R) NFIGNSNHGsQsPR (N) NFIGNS(0.0)NHGS(0.99)QS(0.99)PR s:Phosphorylated S MECOM 141074 2 11 937.1 198.37 HUMAN 1 8.6562 0.9358 IGPGSVCTTRKKTGV-p Q9P2T1-2;T205-p IGPGSVCTTRKKTGV 0.205671943283799 0.0367597620309433 0.197 0.288666666666667 13.2812163304262 19.2988870332466 0.197 0.288666666666667 0.0469762523587206 0.0117519868459655 2.56186624867071 3.72674105300111 Q9P2T1 GMPR2 Q9P2T1.2.T205.p_GMPR2 Q9P2T1-2_T205t _1_1_205_205 Q9P2T1-2 H0YNJ6|Q9P2T1-2|F8WAN9 Isoform 2 of GMP reductase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12748.12748.2 10.4 10.4 1.235 3 1 1 0 756.8756 1432.778 T205t TMT10 196 (K) VGIGPGSVCtTR (K) VGIGPGS(0.0)VCT(0.99)T(0.0)R C:Carbamidomethylation,t:Phosphorylated T GMPR2 40374.6 1 3 3774.1 43.4 HUMAN 1 13.2812 19.2989 IGQDHDFSESSEEEA-p P23497-4;S407-p IGQDHDFSESSEEEA 0.408838439850386 0.00967265628027221 0.144 0.472 7.16810645753708 28.3800595634973 0.144 0.472 0.191950547081968 0.00145209170201043 1.49040846727336 5.94523862495726 P23497 SP100 P23497.4.S407.p_SP100 P23497-4_S407sS409sS410s_3_3_407_410 P23497-4 P23497-4|P23497-3|P23497-2 Isoform Sp100-C of Nuclear autoantigen Sp-100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15601.15601.3 14.48 14.48 5.798 5 3 3 0 1115.1328 3103.4766 S407s S409s S410s TMT10 398 (K) RVIGQDHDFsEssEEEAPAEASSGALR (S) RVIGQDHDFS(0.99)ES(0.99)S(0.99)EEEAPAEAS(0.0)S(0.0)GALR s:Phosphorylated S SP100 103285 2 13 542.1 276.37 HUMAN 1 7.1681 28.3801 IGQERVDSANALANG-p O15020;S1753-p IGQERVDSANALANG 0.640615783875993 0.689459994520489 0.098 -0.0433333333333333 3.61199096742748 2.21270688934025 0.098 -0.0433333333333333 0.43531226460276 0.600799152077262 0.842194511055815 -0.555341633615379 O15020 SPTBN2 O15020.S1753.p_SPTBN2 O15020_S1753s _1_1_1753_1753 O15020 O15020|O15020-2 Spectrin beta chain, non-erythrocytic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17931.17931.4 22.73 18 2.692 4 1 1 0 769.3874 2994.5554 S1753s TMT10 1742 (R) DTSTIGQERVDsANALANGLIAGGHAAR (A) DT(0.0)S(0.0)T(0.0)IGQERVDS(0.99)ANALANGLIAGGHAAR s:Phosphorylated S SPTBN2 272689.3 1 7 781.1 225.92 HUMAN 1 3.612 -2.2127 IGRDHFLTKELQRYI-p Q9NTU4;T179-p IGRDHFLTKELQRYI 0.560135693219576 0.0149209176257738 -0.101 0.456 4.64237360193395 25.2761270271997 -0.101 0.456 0.343370230339589 0.00296747656080438 -1.03809368488474 5.10758605464368 Q9NTU4 TEX40 Q9NTU4.T179.p_TEX40 Q9NTU4_S167sT179t_2_2_167_179 Q9NTU4 Q9NTU4|F5H186 Cation channel sperm-associated protein subunit zeta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14938.14938.3 8.32 2.73 1.547 3 2 2 0 1040.5519 2959.6994 S167s T179t TMT10 164 (K) ALRsYQLGIGRDHFLtKELQR (Y) ALRS(0.99)Y(0.0)QLGIGRDHFLT(0.99)KELQR K:TMT10,s:Phosphorylated S,t:Phosphorylated T CATSPERZ 22895.2 1 1 6988.1 8.32 HUMAN 1 -4.6424 25.2761 IGRIVENSDAVTEIL-p Q16401;S114-p IGRIVENSDAVTEIL 0.77431577737001 0.697039615659779 0.0543333333333333 0.04 2.12666673692747 2.15481617032122 0.0543333333333333 0.04 0.612820558518928 0.60886131730956 0.536674092575798 0.542755779794817 Q16401 PSMD5 Q16401.S114.p_PSMD5 Q16401_S114s _1_1_114_114 Q16401 Q16401 26S proteasome non-ATPase regulatory subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36937.36937.3 16.97 15.98 6.323 2 1 1 0 875.1382 2543.4333 S114s TMT10 110 (R) IVENsDAVTEILNNAELLK (Q) IVENS(0.99)DAVT(0.0)EILNNAELLK K:TMT10,s:Phosphorylated S PSMD5 56594.1 1 2 3275.1 55.24 HUMAN 1 2.1267 2.1548 IGRKLSKSPSMSISE-p A7KAX9;S902-p IGRKLSKSPSMSISE 0.71948805368516 0.805074553506459 0.0533333333333333 -0.026 2.69943889269973 1.31825963121197 0.0533333333333333 -0.026 0.537101185216036 0.738199993233502 0.658674629260597 -0.351873248491946 A7KAX9 ARHGAP32 A7KAX9.S902.p_ARHGAP32 A7KAX9_S902s _1_1_902_902 A7KAX9 A7KAX9|A7KAX9-2|G3V174 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33327.33327.4 18.11 18.11 1.198 15 1 1 0 1175.5851 4619.3915 S902s TMT10 902 (K) sPSMSISEPISVTLPPRVSEVIGTVSNTTAQNASSSTWDK (C) S(0.99)PS(0.0)MS(0.0)IS(0.0)EPIS(0.0)VT(0.0)LPPRVS(0.0)EVIGT(0.0)VS(0.0)NT(0.0)T(0.0)AQNAS(0.0)S(0.0)S(0.0)T(0.0)WDK K:TMT10,s:Phosphorylated S ARHGAP32 232236.5 9 17 159.1 497.4 HUMAN 1 2.6994 -1.3183 IGRLRAGSWTSARTT-p Q8NI35;S1618-p IGRLRAGSWTSARTT 0.0866557243462627 0.0749874548716286 -0.337 -0.256333333333333 22.7017144746561 14.9328950563308 -0.337 -0.256333333333333 0.00536819832892067 0.0321151898990358 -4.48426481597435 -2.86401639185416 Q8NI35 INADL Q8NI35.S1618.p_INADL Q8NI35_S1618s _1_1_1618_1618 Q8NI35 Q8NI35|Q8NI35-5|A0A0U1RQT2|B4DE90 InaD-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8485.8485.2 13.28 5.78 2.123 3 1 1 0 572.7715 1064.5686 S1618s TMT10 1616 (R) AGsWTSAR (T) AGS(0.99)WT(0.0)S(0.0)AR s:Phosphorylated S PATJ 197163.3 3 22 127.1 542.92 HUMAN 1 -22.7017 -14.9329 IGRPMVASPNQRHQD-p Q8IWZ3-6;S2556-p IGRPMVASPNQRHQD 0.502476748524749 0.0217683616730377 0.102 -0.416666666666667 5.51362983862527 22.7205794130451 0.102 -0.416666666666667 0.280955162209621 0.00534493045365692 1.19740646011039 -4.4837385806088 Q8IWZ3 ANKHD1 Q8IWZ3.6.S2556.p_ANKHD1 Q8IWZ3-6_S2556s _1_1_2556_2556 Q8IWZ3-6 Q8IWZ3-6|H7C0V5 Isoform 6 of Ankyrin repeat and KH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9475.9475.3 11.22 11.22 99 1 1 1 0 545.6187 1554.8736 S2556s TMT10 2549 (R) IGRPMVAsPNQR (H) IGRPMVAS(1.0)PNQR s:Phosphorylated S ANKHD1 279224.1 3 41 287.1 383.69 HUMAN 1 5.5136 -22.7206 IGRTRTQSKIERVKV-p Q2LD37;S178-p IGRTRTQSKIERVKV 0.0387809009895526 0.00189412796972361 -0.606 -1.056 32.0178429944344 42.7402260743201 -0.606 -1.056 0.000628370373336329 5.32080560807123e-05 -7.07033718940408 -11.4352869470376 Q2LD37 KIAA1109 Q2LD37.S178.p_KIAA1109 Q2LD37_S178s _1_1_178_178 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7|Q2LD37-6|Q2LD37-2|Q2LD37-5 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.4963.4963.3 8.51 2.77 1.789 2 1 1 0 467.262 1319.8047 S178s TMT10 176 (R) TQsKIER (V) T(0.0)QS(0.99)KIER K:TMT10,s:Phosphorylated S KIAA1109 559693.9 2 1 143.1 520.8 HUMAN 1 -32.0178 -42.7402 IGSELGNSFASNIRI-p Q5VZL5;S242-p IGSELGNSFASNIRI 0.268882767582247 0.313794200644202 -0.287666666666667 -0.153333333333333 10.8160786628568 6.65319028499677 -0.287666666666667 -0.153333333333333 0.0828690067880099 0.216113039513126 -2.12391811324524 -1.39979100962075 Q5VZL5 ZMYM4 Q5VZL5.S242.p_ZMYM4 Q5VZL5_S242s _1_1_242_242 Q5VZL5 Q5VZL5|Q5VZL5-4|Q5VZL5-2 Zinc finger MYM-type protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20466.20466.3 18.96 18.96 2.784 4 1 1 0 663.9871 1909.9817 S242s TMT10 233 (K) ESIGSELGNsFASNIR (I) ES(0.0)IGS(0.0)ELGNS(0.99)FAS(0.0)NIR s:Phosphorylated S ZMYM4 176265.3 4 7 535.1 278.69 HUMAN 1 -10.8161 -6.6532 IGSGESETPPSTPTA-p Q4ADV7;T992-p IGSGESETPPSTPTA 0.850370229459707 0.233834118373229 -0.0413333333333334 -0.47 1.36156668409315 8.30985404086135 -0.0413333333333334 -0.47 0.730875378224461 0.147575613014691 -0.362266384963271 -1.68831666744354 Q4ADV7 RIC1 Q4ADV7.T992.p_RIC1 Q4ADV7_T992t _1_1_992_992 Q4ADV7 Q4ADV7|Q4ADV7-3|Q4ADV7-2 RAB6A-GEF complex partner protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25236.25236.3 23.98 22.99 1.149 9 1 1 0 1089.4954 3186.5065 T992t TMT10 984 (K) AIGSGESEtPPSTPTAQEPSSSGGFEFFR (N) AIGS(0.0)GES(0.0)ET(0.99)PPS(0.0)T(0.0)PT(0.0)AQEPS(0.0)S(0.0)S(0.0)GGFEFFR t:Phosphorylated T RIC1 160895.7 3 3 1588.1 129.39 HUMAN 1 -1.3616 -8.3099 IGSQEQKSPGSHKAK-p O60333-3;S868-p IGSQEQKSPGSHKAK 0.886365307105859 0.00248584650157384 -0.027 -0.758 1.02225502590811 39.8483042764021 -0.027 -0.758 0.790268183464188 0.000103554642181096 -0.279451587613754 -10.0633381744184 O60333 KIF1B O60333.3.S868.p_KIF1B O60333-3_S868s _1_1_868_868 O60333-3 O60333-3 Isoform 3 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19177.19177.3 10.12 7.51 1.433 3 1 1 0 858.1567 2492.4804 S868s TMT10 857 (K) VLPLIGSQEQKsPGSHK (A) VLPLIGS(0.0)QEQKS(0.99)PGS(0.0)HK K:TMT10,s:Phosphorylated S KIF1B 131388.1 3 15 606.2 262.24 HUMAN 1 -1.0223 -39.8483 IGSVPERSPAGVDLS-p Q9UPN4-2;S14-p IGSVPERSPAGVDLS 0.761476943047114 0.00365042513007267 -0.043 -0.634333333333333 2.26694920099879 36.2007377678229 -0.043 -0.634333333333334 0.593341984602634 0.00023984254463254 -0.567140602763346 -8.54692998631121 Q9UPN4 CEP131 Q9UPN4.2.S14.p_CEP131 Q9UPN4-2_S14s _1_1_14_14 Q9UPN4-2 Q9UPN4|Q9UPN4-2|I3L2J8|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25695.25695.3 20.76 17.24 4.661 5 1 1 0 961.1863 2801.5723 S14s TMT10 6 (R) AIGSVPERsPAGVDLSLTGLPPPVSR (R) AIGS(0.0)VPERS(0.99)PAGVDLS(0.0)LT(0.0)GLPPPVS(0.0)R s:Phosphorylated S CEP131 122301.7 2 2 359.1 345.98 HUMAN 1 -2.2669 -36.2007 IGVERIFSIVEQRLE-p P12081;S391-p IGVERIFSIVEQRLE 0.82694655009949 0.210535147160617 -0.0483333333333333 0.234 1.58951221373333 8.90123299296897 -0.0483333333333334 0.234 0.693503693854241 0.128788386038283 -0.415847458488831 1.79062943407641 P12081 HARS P12081.S391.p_HARS P12081_S391s _1_1_391_391 P12081 P12081|P12081-4|P12081-2|P12081-3|B3KWE1|B4DDD8|B4E1C5 Histidine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26237.26237.2 10.58 10.58 99 1 1 1 0 650.8477 1220.72 S391s TMT10 389 (R) IFsIVEQR (L) IFS(1.0)IVEQR s:Phosphorylated S HARS 57980 1 7 2178.1 94.48 HUMAN 1 -1.5895 8.9012 IGVHGPTTPCEEVSM-p O75369-8;T2585-p IGVHGPTTPCEEVSM 0.573489481544659 0.779457434724521 -0.0746666666666667 0.0463333333333333 4.44410649950721 1.49869663925147 -0.0746666666666667 0.0463333333333334 0.359409332620843 0.70815827780894 -1.0011246734269 0.394640360156466 O75369 FLNB O75369.8.T2585.p_FLNB O75369-8_T2585t _1_1_2585_2585 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|A0A0A0MT44 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24701.24701.4 22.6 22.6 1.382 4 1 1 0 742.3713 2886.4928 T2585t TMT10 2571 (K) AGSNMLLIGVHGPTtPCEEVSMK (H) AGS(0.0)NMLLIGVHGPT(0.0)T(0.99)PCEEVS(0.0)MK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T FLNB 283797.6 3 46 67.1 680.07 HUMAN 1 -4.4441 1.4987 IGVMVTASHNPEEDN-p O95394-4;S92-p IGVMVTASHNPEEDN 0.246065561023083 0.0061872699156182 -0.213666666666667 0.757666666666667 11.6528781055355 31.8218582036441 -0.213666666666667 0.757666666666667 0.0683458563510768 0.000657376507327532 -2.27091182989343 6.99417573340086 O95394 PGM3 O95394.4.S92.p_PGM3 O95394-4_S92s _1_1_92_92 O95394-4 O95394-4|O95394-3 Isoform 3 of Phosphoacetylglucosamine mutase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16184.16184.2 22.92 24.12 2.017 4 1 1 0 1312.1453 2543.3176 S92s TMT10 83 (K) STIGVMVTAsHNPEEDNGVK (L) S(0.0)T(0.0)IGVMVT(0.0)AS(0.99)HNPEEDNGVK K:TMT10,s:Phosphorylated S PGM3 63453.7 14 1 4341.1 33.18 HUMAN 1 -11.6529 31.8219 IHCGLQDSQKAGGAE-p Q07864;S1940-p IHCGLQDSQKAGGAE 0.235118035263392 0.0327294099456349 -0.349 0.309666666666667 12.0488134363543 20.0372580223166 -0.349 0.309666666666667 0.0623905273336062 0.0099145771773389 -2.34099570915276 3.88330849023694 Q07864 POLE Q07864.S1940.p_POLE Q07864_S1940s _1_1_1940_1940 Q07864 Q07864|F5H1D6 DNA polymerase epsilon catalytic subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8181.8181.3 15.33 15.33 99 1 1 1 0 575.2919 1643.8939 S1940s TMT10 1933 (R) IHCGLQDsQK (A) IHCGLQDS(1.0)QK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S POLE 264194.7 2 3 2193.1 93.83 HUMAN 1 -12.0488 20.0373 IHDELQQSFQKSHNS-p P49642;S258-p IHDELQQSFQKSHNS 0.108633142739015 0.0119565209762082 -0.680333333333333 -0.708666666666667 20.2033933822982 26.8565096006517 -0.680333333333333 -0.708666666666667 0.00954246689089802 0.00206228669516204 -3.92273737758203 -5.52229984085704 P49642 PRIM1 P49642.S258.p_PRIM1 P49642_S258s _1_1_258_258 P49642 P49642 DNA primase small subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33087.33087.4 22.07 22.07 9.164 2 1 1 0 687.6263 2667.5122 S258s TMT10 243 (K) ILALVPETIHDELQQsFQK (S) ILALVPET(0.0)IHDELQQS(0.99)FQK K:TMT10,s:Phosphorylated S PRIM1 50357.5 1 1 4709.1 27.63 HUMAN 1 -20.2034 -26.8565 IHGEAQCTELDMDDG-p Q14558;T205-p IHGEAQCTELDMDDG 0.18939462571141 0.72197682317235 0.226666666666667 -0.053 14.1464660881055 1.94807845241167 0.226666666666667 -0.053 0.0384904856846923 0.638545950066468 2.71984974018275 -0.49721550874072 Q14558 PRPSAP1 Q14558.T205.p_PRPSAP1 Q14558_T205t _1_1_205_205 Q14558 Q14558-2|B4DP31 Phosphoribosyl pyrophosphate synthase-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.38300.38300.4 18.12 14.32 1.132 2 1 1 0 847.1579 3305.6278 T205t Hydrogen 193 (R) LGLAVIHGEAQCtELDMDDGRHSPPMVK (N) LGLAVIHGEAQCT(0.99)ELDMDDGRHS(0.0)PPMVK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T PRPSAP1 39678.3 8 2 3267.1 55.48 HUMAN 1 14.1465 -1.9481 IHGEDSDSEGEEEGR-p Q9C0C9;S89-p IHGEDSDSEGEEEGR 0.563005808318766 0.214427967317373 0.0815 -0.123 4.59501120149727 8.79776567249112 0.0815 -0.123 0.347135380541062 0.131893512044155 1.02928979168592 -1.7727337532086 Q9C0C9 UBE2O Q9C0C9.S89.p_UBE2O Q9C0C9_S87sS89s_2_2_87_89 Q9C0C9 Q9C0C9 (E3-independent) E2 ubiquitin-conjugating enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7228.7228.4 24.4 24.4 4.175 5 2 2 0 934.1191 3573.5218 S87s S89s TMT10 81 (R) LIHGEDsDsEGEEEGRGSSGCSEAGGAGHEEGR (A) LIHGEDS(0.99)DS(0.99)EGEEEGRGS(0.0)S(0.0)GCS(0.0)EAGGAGHEEGR C:Carbamidomethylation,s:Phosphorylated S UBE2O 142717.3 3 17 308.1 373.27 HUMAN 2 4.595 -8.7978 IHIPGGLSPESKKIL-p P57772;S537-p IHIPGGLSPESKKIL 0.547952287657366 0.0649488646969807 0.0823333333333333 -0.666 4.82224052681316 15.8014057145821 0.0823333333333333 -0.666 0.329439710262749 0.0262941677045332 1.07137977618557 -3.02804352334008 P57772 EEFSEC P57772.S537.p_EEFSEC P57772_S537s _1_1_537_537 P57772 P57772|P57772-2 Selenocysteine-specific elongation factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17244.17244.4 7.73 7.73 2.264 2 1 1 0 533.3146 2050.2628 S537s TMT10 530 (K) IHIPGGLsPESKK (I) IHIPGGLS(0.99)PES(0.0)KK K:TMT10,s:Phosphorylated S EEFSEC 65931.1 1 1 3941.1 40.43 HUMAN 1 4.8222 -15.8014 IHLLKLGSPPPHKEA-p Q9UH65;S312-p IHLLKLGSPPPHKEA 0.672998870731855 0.616279491467276 -0.0573333333333333 -0.0516666666666666 3.2222448353508 2.85692619861456 -0.0573333333333334 -0.0516666666666666 0.476184786864367 0.517973307656295 -0.765202299148423 -0.691105124030673 Q9UH65 SWAP70 Q9UH65.S312.p_SWAP70 Q9UH65_S312s _1_1_312_312 Q9UH65 Q9UH65|E7EMB1 Switch-associated protein 70 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8687.8892.3 11.31 11.31 99 1 1 1 0 457.5911 1290.7934 S312s TMT10 310 (K) LGsPPPHK (E) LGS(1.0)PPPHK K:TMT10,s:Phosphorylated S SWAP70 69395.8 2 1 6499.1 11.31 HUMAN 1 -3.2222 -2.8569 IHRILNHSVDKKGHV-p F5GWX5;S624-p IHRILNHSVDKKGHV 0.294750125885592 0.581064576863464 -0.270666666666667 0.052 10.0100855055925 3.18212296342678 -0.270666666666667 0.052 0.0997680420907701 0.48060435700176 -1.98346270834071 0.757056868507308 F5GWX5 CHD4 F5GWX5.S624.p_CHD4 F5GWX5_S624s _1_1_624_624 F5GWX5 Q12873-3|Q12873-2|Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10361.10361.4 9.98 9.98 99 1 1 1 0 456.0203 1741.0939 S624s TMT10 620 (R) ILNHsVDKK (G) ILNHS(1.0)VDKK K:TMT10,s:Phosphorylated S CHD4 218583 1 11 49.1 753.68 HUMAN 1 -10.0101 3.1821 IHRRAHLSENELEAL-p A0A0A0MR66;S862-p IHRRAHLSENELEAL 0.196192225260437 0.199821006151178 -0.232666666666667 -0.14 13.7790610758089 9.20133286625143 -0.232666666666667 -0.14 0.041888411609991 0.120189551171327 -2.65244262095478 -1.84254119906789 A0A0A0MR66 RBM10 A0A0A0MR66.S862.p_RBM10 A0A0A0MR66_S862s _1_1_862_862 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2|P98175-3|P98175-4 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21626.21626.5 19.41 19.08 99 1 1 1 0 626.1149 3046.5792 S862s TMT10 859 (R) AHLsENELEALEKNDMEQMK (Y) AHLS(1.0)ENELEALEKNDMEQMK K:TMT10,s:Phosphorylated S RBM10 110706.4 9 14 270.1 394.36 HUMAN 1 -13.7791 -9.2013 IHRRIDISPSTFRKH-p Q9Y2W1;S682-p IHRRIDISPSTFRKH 0.409041787828506 0.0553721706024991 0.133 0.232 7.15733811244164 16.7436498847936 0.133 0.232 0.192427079594227 0.0211658157636171 1.48852729017242 3.20991360403524 Q9Y2W1 THRAP3 Q9Y2W1.S682.p_THRAP3 Q9Y2W1_S682s _1_1_682_682 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16457.17080.3 12.71 7.94 2.345 3 1 1 0 500.9305 1420.811 S682s TMT10 678 (R) RIDIsPSTFR (K) RIDIS(0.99)PS(0.0)T(0.0)FR s:Phosphorylated S THRAP3 108720.9 51 81 10.2 1293.04 HUMAN 1 7.1573 16.7436 IHRRIDISPSTLRKH-p Q9NYF8;S658-p IHRRIDISPSTLRKH 0.42354380212647 0.0638436762365753 0.107666666666667 0.209333333333333 6.87602939126882 15.9086553276069 0.107666666666667 0.209333333333333 0.205303834511121 0.0256527818079876 1.43929488574097 3.04853187369827 Q9NYF8 BCLAF1 Q9NYF8.S658.p_BCLAF1 Q9NYF8_S658s _1_1_658_658 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|Q9NYF8-4|A0A1W2PQ43 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18620.18825.2 11.41 4.34 2.702 3 1 1 0 834.4782 1587.9834 S658s TMT10 655 (R) IDIsPSTLRK (H) IDIS(0.99)PS(0.0)T(0.0)LRK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 42 35 10.1 1293.04 HUMAN 1 6.876 15.9087 IHSDVEDSGESEEEG-p P15822;S492-p IHSDVEDSGESEEEG 0.674553852682581 0.166444982529729 0.0603333333333333 0.143666666666667 3.20456645331374 10.2410968008825 0.0603333333333333 0.143666666666667 0.478127094149262 0.0945998221485917 0.761664424324245 2.02278977156882 P15822 HIVEP1 P15822.S492.p_HIVEP1 P15822_S492sS495s_2_2_492_495 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22445.22445.5 19.29 19.29 1.15 5 2 2 0 978.8744 4730.3256 S492s S495s TMT10 482 (K) ALSIHSDVEDsGEsEEEGATDERQHDLGAMELQPVHIIK (R) ALS(0.0)IHS(0.0)DVEDS(0.99)GES(0.99)EEEGAT(0.0)DERQHDLGAMELQPVHIIK K:TMT10,s:Phosphorylated S HIVEP1 299483.8 1 35 82.1 631.69 HUMAN 1 3.2046 10.2411 IHSSVMASPGGLSAV-p Q9NQW6;S927-p IHSSVMASPGGLSAV 0.327394528659194 0.211183122254489 0.517666666666667 -0.24 9.07154614793367 8.88522869765415 0.517666666666667 -0.24 0.12383556364481 0.129263862920597 1.82074871995361 -1.78786133246881 Q9NQW6 ANLN Q9NQW6.S927.p_ANLN Q9NQW6_S927s _1_1_927_927 Q9NQW6 Q9NQW6 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14265.14265.3 7.97 7.97 1.207 5 1 1 0 693.6798 1999.0592 S927s TMT10 918 (K) SNIHSSVMAsPGGLSAVR (T) S(0.0)NIHS(0.0)S(0.0)VMAS(0.99)PGGLS(0.0)AVR s:Phosphorylated S ANLN 125566 1 47 68.1 675.08 HUMAN 1 9.0715 -8.8852 IHVFKKPSFSKKKEK-p Q15311;S116-p IHVFKKPSFSKKKEK 0.661350088579494 0.0255852134256538 0.125333333333333 -0.850666666666667 3.3616505422661 21.6602415023688 0.125333333333333 -0.850666666666667 0.461142283481446 0.00682300751723291 0.792957294192133 -4.24026971761234 Q15311 RALBP1 Q15311.S116.p_RALBP1 Q15311_S116s _1_1_116_116 Q15311 Q15311|A0A1W2PRI7 RalA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16477.16477.5 11.18 11.18 2.218 2 1 1 0 475.088 2291.441 S116s TMT10 108 (K) GIHVFKKPsFSK (K) GIHVFKKPS(0.99)FS(0.0)K K:TMT10,s:Phosphorylated S RALBP1 76461.4 2 4 822.1 218.43 HUMAN 1 3.3617 -21.6602 IIADQTPTPTRFLKN-p P17544-6;T53-p IIADQTPTPTRFLKN 0.42575046939312 0.651277010605108 0.106 -0.047 6.83300466758958 2.54242665332296 0.106 -0.047 0.207347848442788 0.556874504136359 1.4317487231297 -0.625756153005752 P17544 ATF7 P17544.6.T53.p_ATF7 P17544-6_T53t _1_1_53_53 P17544-6 P17544|P17544-6|P17544-3|K7ELQ4|P17544-2|P17544-4|P17544-5 Isoform 6 of Cyclic AMP-dependent transcription factor ATF-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15049.15049.2 17.19 17.19 1.188 5 1 1 0 962.4866 1843.9963 T53t TMT10 42 (R) TDSVIIADQTPtPTR (F) T(0.0)DS(0.0)VIIADQT(0.0)PT(0.99)PT(0.0)R t:Phosphorylated T ATF7 52155.3 4 1 758.1 230.62 HUMAN 1 6.833 -2.5424 IIDLTEDSNEQPDSL-p Q13111;S123-p IIDLTEDSNEQPDSL 0.307172848614777 0.0389530117924889 0.2 -0.278333333333333 9.58252642874422 18.9245762972046 0.2 -0.278333333333333 0.11008986955389 0.0128098006235901 1.90926315919333 -3.64867691617755 Q13111 CHAF1A Q13111.S123.p_CHAF1A Q13111_S123s _1_1_123_123 Q13111 Q13111|Q13111-3|Q13111-2 Chromatin assembly factor 1 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24098.24098.4 24.91 23.36 2.171 7 1 1 0 1027.267 4026.0668 S123s TMT10 104 (R) NRIETSIGQSTVIIDLTEDsNEQPDSLVDHNK (L) NRIET(0.0)S(0.0)IGQS(0.0)T(0.0)VIIDLT(0.0)EDS(0.99)NEQPDS(0.0)LVDHNK K:TMT10,s:Phosphorylated S CHAF1A 108122.1 3 3 633.1 256.49 HUMAN 1 9.5825 -18.9246 IIDPRRGTLVAEREK-p Q9BR76;T209-p IIDPRRGTLVAEREK 0.96776831271533 0.650682255630463 -0.00800000000000001 0.059 0.276625962383786 2.54808584385842 -0.00800000000000001 0.059 0.93829068268422 0.556149326486265 -0.0810827794763036 0.62694695120798 Q9BR76 CORO1B Q9BR76.T209.p_CORO1B Q9BR76_T209t _1_1_209_209 Q9BR76 Q9BR76|F5H390|A0A087WW53 Coronin-1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5691.5691.4 8.28 8.28 99 1 1 1 0 424.9933 1616.9848 T209t TMT10 207 (R) RGtLVAEREK (A) RGT(1.0)LVAEREK K:TMT10,t:Phosphorylated T CORO1B 54918.3 1 1 3992.1 39.51 HUMAN 1 -0.2766 2.5481 IIEDNNASPQKLREL-p Q5UIP0;S2144-p IIEDNNASPQKLREL 0.352995852382669 0.0364477443114034 -0.170333333333333 -0.33 8.39895602991765 19.3513968460732 -0.170333333333333 -0.33 0.144578727165197 0.0116107511057796 -1.70430811650737 -3.73776133467913 Q5UIP0 RIF1 Q5UIP0.S2144.p_RIF1 Q5UIP0_S2144s _1_1_2144_2144 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27691.27691.4 17.14 17.14 1.208 5 1 1 0 952.736 3727.9577 S2144s TMT10 2120 (K) VEEPSQCLASGTAISELIIEDNNAsPQKLR (E) VEEPS(0.0)QCLAS(0.0)GT(0.0)AIS(0.0)ELIIEDNNAS(0.99)PQKLR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RIF1 276628.8 6 26 29.1 922.06 HUMAN 1 -8.399 -19.3514 IIEKTTRTPEEGGYS-p P46821;T1949-p IIEKTTRTPEEGGYS 0.159088552666288 0.575280514614872 0.226666666666667 0.085 15.9902465912024 3.23862275713361 0.226666666666667 0.085 0.0251753397881946 0.474392401623524 3.06631775182738 0.76836333403025 P46821 MAP1B P46821.T1949.p_MAP1B P46821_T1949t _1_1_1949_1949 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12467.12467.3 16.66 16.66 1.106 7 1 1 0 824.3934 2391.208 T1949t TMT10 1946 (K) TTRtPEEGGYSYDISEK (T) T(0.0)T(0.0)RT(0.99)PEEGGY(0.0)S(0.0)Y(0.0)DIS(0.0)EK K:TMT10,t:Phosphorylated T MAP1B 271827.6 1 22 210.1 442.48 HUMAN 1 15.9902 3.2386 IIEQSWGSPKVTKDG-p P10809;S70-p IIEQSWGSPKVTKDG 0.698184520976541 0.135706889145225 0.0963333333333333 0.169 2.93261747918946 11.4310075189137 0.0963333333333333 0.169 0.509023991429382 0.0719282092535513 0.706692602168166 2.23074662181233 P10809 HSPD1 P10809.S70.p_HSPD1 P10809_S70s _1_1_70_70 P10809 P10809|P10809-2 60 kDa heat shock protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22661.22661.2 16.02 12.25 1.116 3 1 1 0 942.0075 1803.0417 S70s TMT10 61 (R) TVIIEQSWGsPK (V) T(0.0)VIIEQS(0.0)WGS(0.99)PK K:TMT10,s:Phosphorylated S HSPD1 61224.7 5 2 1165.1 170.59 HUMAN 1 2.9326 11.431 IIFFKFNTPQQPKKK-p J3KQ32;T409-p IIFFKFNTPQQPKKK 0.761400486091273 0.377124310516283 -0.0493333333333333 0.0913333333333333 2.27010140443722 5.62480625591818 -0.0493333333333334 0.0913333333333333 0.592911480389151 0.273854180123959 -0.567820545070035 1.2171524586405 J3KQ32 NotFound J3KQ32.T409.p_NotFound J3KQ32_T409t _1_1_409_409 J3KQ32 J3KQ32|Q9NTK5|Q9NTK5-2 Obg-like ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10998.10998.2 9.67 6.19 99 1 1 1 0 749.398 1417.8204 T409t TMT10 407 (K) FNtPQQPK (K) FNT(1.0)PQQPK K:TMT10,t:Phosphorylated T OLA1 47165.4 2 1 6764.1 9.67 HUMAN 1 -2.2701 5.6248 IIGNDRVSGAGFSPS-p Q9C0C2;S1133-p IIGNDRVSGAGFSPS 0.207219378790471 0.00387443643379497 -0.357666666666667 -1.02666666666667 13.2139887768429 35.6592725220286 -0.357666666666667 -1.02666666666667 0.0477090888335418 0.000271689433224209 -2.54969901269305 -8.34010932662228 Q9C0C2 TNKS1BP1 Q9C0C2.S1133.p_TNKS1BP1 Q9C0C2_S1133sS1138s_2_2_1133_1138 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24627.24627.4 14.14 14.14 4.216 6 2 2 0 723.8495 2732.4408 S1133s S1138s TMT10 1121 (R) SYQFGIIGNDRVsGAGFsPSSK (M) S(0.0)Y(0.0)QFGIIGNDRVS(0.99)GAGFS(0.99)PS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 2 82 4.1 2105.7 HUMAN 1 -13.214 -35.6593 IIIGRHAYGDQYRAT-p O75874;Y135-p IIIGRHAYGDQYRAT 0.35372717190957 0.00987532593183393 0.730333333333333 1.15333333333333 8.38553010669442 28.2109014658806 0.730333333333334 1.15333333333333 0.145026374202105 0.0015097667390688 1.7019827238677 5.89710146876267 O75874 IDH1 O75874.Y135.p_IDH1 O75874_Y135y _1_1_135_135 O75874 O75874 Isocitrate dehydrogenase [NADP] cytoplasmic GG20160819_MSz_CCLE_T4D7_pY_Injection_01.4518.4518.3 11.51 11.51 11.506 2 1 1 0 440.1974 1238.6116 Y135y TMT10 133 (R) HAyGDQYR (A) HAY(0.99)GDQY(0.0)R y:Phosphorylated Y IDH1 46943.7 1 1 309.1 11.51 HUMAN 1 8.3855 28.2109 IIIKKEVSPEVVRSK-p Q5T200;S198-p IIIKKEVSPEVVRSK 0.233628206047255 0.0845963598172146 0.502 -0.440666666666667 12.1078356689227 14.2004069853825 0.502 -0.440666666666667 0.0615483525983434 0.0380153769739183 2.35147632402346 -2.72812327688565 Q5T200 ZC3H13 Q5T200.S198.p_ZC3H13 Q5T200_S198s _1_1_198_198 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10626.10626.2 13.6 5.56 99 1 1 1 0 612.3157 1143.6571 S198s TMT10 196 (K) EVsPEVVR (S) EVS(1.0)PEVVR s:Phosphorylated S ZC3H13 197316.7 15 4 24.1 987.82 HUMAN 1 12.1078 -14.2004 IIKDSPDSPEPPNKK-p Q9NVM9;S626-p IIKDSPDSPEPPNKK 0.214870137690014 0.0111375459548296 -0.323333333333333 0.494 12.8713707365047 27.3537452493462 -0.323333333333333 0.494 0.0516253401723595 0.00183918524902258 -2.4879142498615 5.65774546375547 Q9NVM9 ASUN Q9NVM9.S626.p_ASUN Q9NVM9_S626s _1_1_626_626 Q9NVM9 Q9NVM9 Integrator complex subunit 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18418.18418.5 23.58 18.71 3.736 2 1 1 0 698.7767 3409.8872 S626s TMT10 610 (R) GKEELAEAEIIKDSPDsPEPPNK (K) GKEELAEAEIIKDS(0.0)PDS(0.99)PEPPNK K:TMT10,s:Phosphorylated S INTS13 81193.5 2 1 3625.1 46.67 HUMAN 1 -12.8714 27.3537 IIKKLGGSLADSYLD-p P78371;S208-p IIKKLGGSLADSYLD 0.250345564803187 0.184070145532339 -0.207 -0.144 11.480467680171 9.66379251239198 -0.207 -0.144 0.0711136929086245 0.10804899923982 -2.24050813262636 -1.92260605440531 P78371 CCT2 P78371.S208.p_CCT2 P78371_S208s _1_1_208_208 P78371 P78371|F5GWF6|P78371-2|F8VQ14 T-complex protein 1 subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31448.31448.4 13.05 13.05 1.371 3 1 1 0 702.8819 2728.5376 S208s TMT10 204 (K) KLGGsLADSYLDEGFLLDK (K) KLGGS(0.99)LADS(0.0)Y(0.0)LDEGFLLDK K:TMT10,s:Phosphorylated S CCT2 57829.5 2 7 1895.1 108.56 HUMAN 1 -11.4805 -9.6638 IIKLLYVTPEKICAS-p P54132;T766-p IIKLLYVTPEKICAS 0.419663834440251 0.0248321011133678 -0.418 0.484 6.95946078863596 21.8349599174735 -0.418 0.484 0.201397428536926 0.00655396334683003 -1.45391515620891 4.27980850515695 P54132 BLM P54132.T766.p_BLM P54132_T766t _1_1_766_766 P54132 P46063|P54132|H0YNU5 Bloom syndrome protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21747.21747.3 12.88 11.97 5.378 2 1 1 0 500.9547 1420.8816 T766t TMT10 762 (K) LLYVtPEK (I) LLY(0.0)VT(0.99)PEK K:TMT10,t:Phosphorylated T BLM 160709.2 1 14 1140.2 173.27 HUMAN 1 -6.9595 21.835 IIKNFVKTMADRVAL-p Q2UY09;T823-p IIKNFVKTMADRVAL 0.349046999006009 0.966504145237237 0.197666666666667 0.00433333333333334 8.49213304340264 0.209669156798312 0.197666666666667 0.00433333333333333 0.1415098581606 0.952868750287991 1.72044436953787 0.0618888090686905 Q2UY09 COL28A1 Q2UY09.T823.p_COL28A1 Q2UY09_T823tS843s_2_2_823_843 Q2UY09 Q2UY09 Collagen alpha-1(XXVIII) chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8194.8194.5 11.72 1.95 1.597 4 2 2 0 891.0772 4290.493 T823t N841n S843s TMT10 819 (K) NFVKtMADRVALDLATARIGIInYsHKVEK (V) N(0.0)FVKT(0.99)MADRVALDLAT(0.0)ARIGIIN(0.99)Y(0.0)S(0.99)HKVEK K:TMT10,t:Phosphorylated T,n:Deamidated,s:Phosphorylated S COL28A1 117510.9 1 1 6432.1 11.72 HUMAN 1 8.4921 0.2097 IILEKNDTKKTLQNL-p Q8TC20-5;T378-p IILEKNDTKKTLQNL 0.421140316027267 0.0731293901572789 -0.128 0.275666666666667 6.91825161470434 15.0852375851093 -0.128 0.275666666666667 0.203317536313986 0.0310081775057782 -1.44669586715316 2.89255221059207 Q8TC20 CAGE1 Q8TC20.5.T378.p_CAGE1 Q8TC20-5_T378t_1_1_378_378 Q8TC20-5 Q8TC20-5|Q8TC20-3|E7EUJ7 Isoform 5 of Cancer-associated gene 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12721.12721.4 8.3 8.3 2.237 3 1 1 0 739.8953 2874.6503 N376n T378t N391n Hydrogen 376 (K) nDtKKTLQNLEEVLAnTQK (H) N(0.99)DT(0.99)KKT(0.0)LQN(0.0)LEEVLAN(0.99)T(0.0)QK K:TMT10-Lys-Only,n:Deamidated,t:Phosphorylated T CAGE1 98561.7 1 1 6992.1 8.3 HUMAN 1 -6.9183 15.0852 IILKKKKSKDHFGLE-p Q9Y490;S405-p IILKKKKSKDHFGLE 0.0715981735064038 0.109017945850107 -0.370666666666667 0.217333333333333 24.7466649716928 12.7153975753641 -0.370666666666667 0.217333333333333 0.00335222764154173 0.0535131162887348 -4.97989962676268 2.45859356074682 Q9Y490 TLN1 Q9Y490.S405.p_TLN1 Q9Y490_S405s _1_1_405_405 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19338.19338.4 16.02 16.02 6.397 5 1 1 0 916.2156 3581.8815 S405s TMT10 405 (K) sKDHFGLEGDEESTMLEDSVSPKK (S) S(0.99)KDHFGLEGDEES(0.0)T(0.0)MLEDS(0.0)VS(0.0)PKK K:TMT10,s:Phosphorylated S TLN1 271930.4 2 4 267.1 395.2 HUMAN 1 -24.7467 12.7154 IILPDDSSEEENNVN-p Q8IYD8;S1674-p IILPDDSSEEENNVN 0.51636083436218 0.00840448513471 0.093 -0.568666666666667 5.29913109397731 29.4845311030751 0.093 -0.568666666666667 0.295179974303746 0.00112602203612417 1.1586038183764 -6.2671015338771 Q8IYD8 FANCM Q8IYD8.S1674.p_FANCM Q8IYD8_S1673sS1674s_2_2_1673_1674 Q8IYD8 Q8IYD8|Q8IYD8-3 Fanconi anemia group M protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20078.20078.4 9.72 7.64 99 2 2 2 0 677.0677 2545.3146 S1673s S1674s TMT10 1667 (R) IILPDDssEEENNVNDKR (E) IILPDDS(1.0)S(1.0)EEENNVNDKR K:TMT10,s:Phosphorylated S FANCM 234983 3 6 2500.1 81.07 HUMAN 1 5.2991 -29.4845 IILRRARSLPSSPER-p O95685;S74-p IILRRARSLPSSPER 0.178441218280072 0.669069046411955 -0.29 0.0883333333333333 14.7819776990506 2.38538274274666 -0.29 0.0883333333333333 0.033250810059662 0.57737998610385 -2.83766004856734 0.592478113680795 O95685 PPP1R3D O95685.S74.p_PPP1R3D O95685_S74s _1_1_74_74 O95685 O95685 Protein phosphatase 1 regulatory subunit 3D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8444.8444.2 9.84 9.84 1.208 3 1 1 0 591.2925 1101.6102 S74s TMT10 74 (R) sLPSSPER (R) S(0.99)LPS(0.0)S(0.0)PER s:Phosphorylated S PPP1R3D 33300.2 3 4 2020.1 102.1 HUMAN 1 -14.782 2.3854 IIPCIKGYDVIAQAQ-p Q14240-2;Y72-p IIPCIKGYDVIAQAQ 0.172662609747518 0.0118634826297909 -0.323666666666667 0.631666666666667 15.1879403549777 26.9153662114281 -0.323666666666667 0.631666666666667 0.0302834928464459 0.00203452663062276 -2.91377443319908 5.53820466245779 Q14240 EIF4A2 Q14240.2.Y72.p_EIF4A2 Q14240-2_Y72y _1_1_72_72 Q14240-2 Q14240-2|P60842|E7EQG2|P60842-2|J3KT12 Isoform 2 of Eukaryotic initiation factor 4A-II GG20160819_MSz_CCLE_T4D7_pY_Injection_02.17167.17167.3 16.41 16.41 16.406 3 1 1 0 644.9993 1853.0169 Y72y TMT10 71 (K) GyDVIAQAQSGTGK (T) GY(0.99)DVIAQAQS(0.0)GT(0.0)GK K:TMT10,y:Phosphorylated Y EIF4A2 46716.7 2 3 74.1 34.02 HUMAN 1 -15.1879 26.9154 IIPELVGSPTQSTSS-p Q9NSI6-2;S1475-p IIPELVGSPTQSTSS 0.915478827417363 0.031656239471971 0.0193333333333333 0.305666666666667 0.751032050988823 20.2530270108375 0.0193333333333333 0.305666666666667 0.841195217502922 0.00943403099832637 0.210206032544605 3.92972759772497 Q9NSI6 BRWD1 Q9NSI6.2.S1475.p_BRWD1 Q9NSI6-2_S1475s _1_1_1475_1475 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24811.24811.3 16.14 16.14 2.725 6 1 1 0 661.0124 1901.0541 S1475s TMT10 1468 (K) IIPELVGsPTQSTSSR (T) IIPELVGS(0.99)PT(0.0)QS(0.0)T(0.0)S(0.0)S(0.0)R s:Phosphorylated S BRWD1 259915.1 2 10 208.1 444.81 HUMAN 1 0.751 20.253 IIQDLSDSCFGFLKS-p Q14746;S578-p IIQDLSDSCFGFLKS 0.200461101606532 0.76713806264453 -0.26 0.0323333333333334 13.5835240188678 1.59089284808386 -0.26 0.0323333333333334 0.0438175002804224 0.693283262122784 -2.61676565440992 0.416122514150902 Q14746 COG2 Q14746.S578.p_COG2 Q14746_S578s _1_1_578_578 Q14746 Q14746|Q14746-2|B7Z2Y2 Conserved oligomeric Golgi complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34227.34227.3 14.7 13.05 3.445 2 1 1 0 727.7078 2101.1404 S578s TMT10 571 (K) IIQDLSDsCFGFLK (S) IIQDLS(0.0)DS(0.99)CFGFLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S COG2 83776.5 1 3 4427.1 31.58 HUMAN 1 -13.5835 1.5909 IIQERKKSLQAGVKQ-p Q8N118;S268-p IIQERKKSLQAGVKQ 0.295243174589512 0.109001060661736 -0.207666666666667 0.190666666666667 9.97745034036877 12.7175433407788 -0.207666666666667 0.190666666666667 0.100520575410755 0.0534866830189575 -1.97779306465801 2.45897789726351 Q8N118 CYP4X1 Q8N118.S268.p_CYP4X1 Q8N118_S268s _1_1_268_268 Q8N118 Q8N118|Q8N118-2 Cytochrome P450 4X1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9299.9299.4 7.28 7.28 99 1 1 1 0 489.5611 1875.2561 S268s TMT10 266 (R) KKsLQAGVK (Q) KKS(1.0)LQAGVK K:TMT10,s:Phosphorylated S CYP4X1 59558.8 1 1 7212.1 7.28 HUMAN 1 -9.9775 12.7175 IIQGQDGSPELLIRS-p Q8IWT3;S947-p IIQGQDGSPELLIRS 0.0990612726298986 0.0957805260467767 -0.366 -0.204 21.2392120757496 13.4713722300004 -0.366 -0.204 0.00751759270522071 0.0449637761466225 -4.15009091326 -2.59487686868118 Q8IWT3 CUL9 Q8IWT3.S947.p_CUL9 Q8IWT3_S947s _1_1_947_947 Q8IWT3 Q8IWT3|E9PEZ1|Q8IWT3-3 Cullin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.28676.28676.3 7.66 7.66 1.602 2 1 1 0 810.7682 2350.3179 S947s TMT10 934 (R) AALETPIIQGQDGsPELLIR (S) AALET(0.0)PIIQGQDGS(0.99)PELLIR s:Phosphorylated S CUL9 285617.3 1 6 1190.1 168.21 HUMAN 1 -21.2392 -13.4714 IIQKPKISMQDVDLS-p Q09666;S501-p IIQKPKISMQDVDLS 0.47487636038364 0.738355898952842 0.110333333333333 0.0543333333333333 5.95542882077267 1.8169103424259 0.110333333333333 0.0543333333333333 0.25377983923132 0.658125874725206 1.27661951561038 0.467810071695877 Q09666 AHNAK Q09666.S501.p_AHNAK Q09666_S501s _1_1_501_501 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26635.26635.3 12.84 12.84 5.95 3 1 1 0 676.6887 1948.0825 S501s TMT10 500 (K) IsMQDVDLSLGSPK (L) IS(0.99)MQDVDLS(0.0)LGS(0.0)PK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 24 1.1 4313.36 HUMAN 1 5.9554 1.8169 IIQNPVETPKKDYSL-p P38432;T456-p IIQNPVETPKKDYSL 0.12758777343778 0.00687614048228366 -0.831666666666667 -0.920333333333333 18.5403545087055 31.0154540912715 -0.831666666666667 -0.920333333333333 0.013994730808172 0.000791506691640694 -3.5724601586271 -6.7359711573981 P38432 COIL P38432.T456.p_COIL P38432_T456t _1_1_456_456 P38432 P38432 Coilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14550.14550.3 17.41 14.07 7.496 4 1 1 0 808.4554 2343.3851 T456t TMT10 445 (K) NSSTIIQNPVEtPKK (D) NS(0.0)S(0.0)T(0.0)IIQNPVET(0.99)PKK K:TMT10,t:Phosphorylated T COIL 63291.8 4 13 395.1 330.42 HUMAN 1 -18.5404 -31.0155 IIRLTKGYASVFKGC-p Q9BQ15;Y74-p IIRLTKGYASVFKGC 0.638049908822708 0.352986044717817 0.0643333333333333 0.099 3.64205260572611 5.99525139454142 0.0643333333333334 0.099 0.432309460350957 0.251463444732598 0.848057816869635 1.28341252077688 Q9BQ15 NABP2 Q9BQ15.Y74.p_NABP2 Q9BQ15_Y74y _1_1_74_74 Q9BQ15 Q9BQ15 SOSS complex subunit B1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.17978.18028.2 13.26 4.38 2.29 2 1 1 0 655.3548 1229.7294 Y74y TMT10 73 (K) GyASVFK (G) GY(0.99)AS(0.0)VFK K:TMT10,y:Phosphorylated Y NABP2 22508.6 1 1 264.1 13.26 HUMAN 1 3.6421 5.9953 IIRSASRSDGCQMPK-p Q70EK8;S907-p IIRSASRSDGCQMPK 0.940726562469484 0.13379811282805 0.0116666666666667 0.217 0.52143028115167 11.5150909461722 0.0116666666666667 0.217 0.886863889145529 0.0705490070136664 0.149113501101322 2.24554090655835 Q70EK8 USP53 Q70EK8.S907.p_USP53 Q70EK8_S907s _1_1_907_907 Q70EK8 Q70EK8 Inactive ubiquitin carboxyl-terminal hydrolase 53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26666.26666.4 7.41 7.41 99 1 1 1 0 798.666 3111.6761 S907s TMT10 907 (R) sDGCQMPKLFCQNLPPPLPPK (K) S(1.0)DGCQMPKLFCQNLPPPLPPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S USP53 122744 1 2 3358.1 52.94 HUMAN 1 0.5214 11.5151 IIRSEPFSPSLRPEP-p O60885;S1126-p IIRSEPFSPSLRPEP 0.13475082710075 0.519589992609842 -0.506666666666667 0.071 17.8563083950015 3.82005645052052 -0.506666666666667 0.071 0.0163820844537728 0.414948649008508 -3.43324308453524 0.882428509820136 O60885 BRD4 O60885.S1126.p_BRD4 O60885_S1126s _1_1_1126_1126 O60885 O60885 Bromodomain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15081.15081.5 15.69 13.94 1.227 4 1 1 0 606.1324 2946.6656 S1126s TMT10 1122 (R) SEPFsPSLRPEPPKHPESIK (A) S(0.0)EPFS(0.99)PS(0.0)LRPEPPKHPES(0.0)IK K:TMT10,s:Phosphorylated S BRD4 152672.5 5 7 941.1 198.07 HUMAN 1 -17.8563 3.8201 IIRSKTFSPGPQSQY-p Q8IX03-2;S931-p IIRSKTFSPGPQSQY 0.567474836567323 0.0827361607772573 0.09 -0.218333333333333 4.53016271218991 14.3359861598186 0.09 -0.218333333333333 0.352357669409853 0.0368469363391364 1.01720803159206 -2.75311772115398 Q8IX03 WWC1 Q8IX03.2.S931.p_WWC1 Q8IX03-2_S931s _1_1_931_931 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13718.13718.2 14.49 8.48 3.175 4 1 1 0 918.4218 1755.8686 S931s TMT10 929 (K) TFsPGPQSQYVCR (L) T(0.0)FS(0.99)PGPQS(0.0)QY(0.0)VCR C:Carbamidomethylation,s:Phosphorylated S WWC1 126701.1 2 18 312.1 370.85 HUMAN 1 4.5302 -14.336 IIRTPPKSPATPKQL-p P11137;S1653-p IIRTPPKSPATPKQL 0.131539706649705 0.313444187547371 0.265 0.153666666666667 18.1893982039198 6.6606622944586 0.265 0.153666666666667 0.0151726059767386 0.215741538051769 3.50069771425086 1.40110469964722 P11137 MAP2 P11137.S1653.p_MAP2 P11137_T1649tS1653s_2_2_1649_1653 P11137 P11137|P11137-3|P11137-4|P11137-2 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14172.14382.5 11.44 11.44 1.536 3 2 2 0 556.934 2620.7048 T1649t S1653s TMT10 1643 (K) KVAIIRtPPKsPATPK (Q) KVAIIRT(0.99)PPKS(0.99)PAT(0.0)PK K:TMT10,t:Phosphorylated T,s:Phosphorylated S MAP2 199979.2 7 30 117.1 560.28 HUMAN 1 18.1894 6.6607 IISIFSGTEKGSKKK-p Q13177;T60-p IISIFSGTEKGSKKK 0.420320976430283 0.0892889754855243 0.135333333333333 0.185666666666667 6.94604675660882 13.883872758618 0.135333333333333 0.185666666666667 0.202020445430427 0.0408895870091435 1.45156563941689 2.67003639011285 Q13177 PAK2 Q13177.T60.p_PAK2 Q13177_T60t _1_1_60_60 Q13177 Q13177 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28897.28897.3 13.64 13.64 1.609 3 1 1 0 544.9716 1552.9351 T60t TMT10 53 (K) IISIFSGtEK (G) IIS(0.0)IFS(0.0)GT(0.99)EK K:TMT10,t:Phosphorylated T PAK2 58326.8 1 19 272.1 393.22 HUMAN 1 6.946 13.8839 IISSDGESN______-p Q9BW71;S555-p IISSDGESN______ 0.989020433252707 0.241505796412076 0.00233333333333333 0.189666666666667 0.0988991261491916 8.12832947946381 0.00233333333333333 0.189666666666667 0.977484967890373 0.153874640770273 0.029550308400292 1.65688120634916 Q9BW71 HIRIP3 Q9BW71.S555.p_HIRIP3 Q9BW71_S555s _1_1_555_555 Q9BW71 Q9BW71|Q9BW71-2 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12795.12795.2 7.57 7.57 5.312 3 1 1 0 644.2875 1207.6004 S555s TMT10 547 (R) GIISSDGEsN (-) GIIS(0.0)S(0.0)DGES(0.99)N s:Phosphorylated S HIRIP3 62298.3 1 17 178.1 481.23 HUMAN 1 0.0989 8.1283 IISSRRGSQSDEDSC-p Q9UPZ3;S461-p IISSRRGSQSDEDSC 0.951644746679854 0.0144466519684037 0.0133333333333333 0.479 0.42669268120728 25.5100111710122 0.0133333333333333 0.479 0.906422613661029 0.00281189359757893 0.123163987350435 5.16749566931484 Q9UPZ3 HPS5 Q9UPZ3.S461.p_HPS5 Q9UPZ3_S461sS463s_2_2_461_463 Q9UPZ3 Q9UPZ3|Q9UPZ3-2|G3V159 Hermansky-Pudlak syndrome 5 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11532.11532.4 8.47 8.47 1.593 7 2 2 0 854.8764 3256.5541 S461s S463s TMT10 459 (R) RGsQsDEDSCSLHSQTLSEDERFK (E) RGS(0.99)QS(0.99)DEDS(0.0)CS(0.0)LHS(0.0)QT(0.0)LS(0.0)EDERFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HPS5 129386.8 1 7 2159.1 95.05 HUMAN 1 0.4267 25.51 IISSSDDSSDEDKLK-p Q6PD62;S1020-p IISSSDDSSDEDKLK 0.148266672319898 0.0201320943264057 -0.277666666666667 0.643 16.7631274435687 23.2340659257474 -0.277666666666667 0.643 0.0210711023019637 0.00474890418698733 -3.2161251809108 4.6047541501247 Q6PD62 CTR9 Q6PD62.S1020.p_CTR9 Q6PD62_S1020sS1021s_2_2_1020_1021 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15930.15930.3 12.77 12.77 3.598 5 2 2 0 696.3005 1926.9544 S1020s S1021s TMT10 1012 (K) AIISSSDDssDEDK (L) AIIS(0.0)S(0.0)S(0.0)DDS(0.99)S(0.99)DEDK K:TMT10,s:Phosphorylated S CTR9 134412.8 10 13 152.1 508.81 HUMAN 1 -16.7631 23.2341 IITVLGDSKNNVRAA-p Q14008-3;S953-p IITVLGDSKNNVRAA 0.171396449036957 0.09461255719144 -0.251333333333333 0.200333333333333 15.2544100911782 13.5421383989265 -0.251333333333333 0.200333333333333 0.0298235261792131 0.0442370502328781 -2.92630359259838 2.60772898055884 Q14008 CKAP5 Q14008.3.S953.p_CKAP5 Q14008-3_S953s _1_1_953_953 Q14008-3 Q14008-3|Q14008-2 Isoform 3 of Cytoskeleton-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35600.35600.3 22.08 22.08 7.393 2 1 1 0 660.0502 1898.1727 S953s TMT10 941 (K) NLGIPIITVLGDsK (N) NLGIPIIT(0.0)VLGDS(0.99)K K:TMT10,s:Phosphorylated S CKAP5 228079.2 1 4 1323.1 154.15 HUMAN 1 -15.2544 13.5421 IIVEETKSNGQTVIE-p Q14155-5;S664-p IIVEETKSNGQTVIE 0.0306969141455794 0.0366259766755299 -0.639333333333333 -0.268333333333333 35.3401999098816 19.3237766799832 -0.639333333333333 -0.268333333333333 0.000292401777942544 0.0116848282156816 -8.23647229476747 -3.73196252423428 Q14155 ARHGEF7 Q14155.5.S664.p_ARHGEF7 Q14155-5_S664s _1_1_664_664 Q14155-5 Q14155-5|B1ALK7|Q14155-1 Isoform 5 of Rho guanine nucleotide exchange factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19420.19420.3 19.52 14.51 1.134 3 1 1 0 895.4966 2604.5063 S664s TMT10 657 (K) IIVEETKsNGQTVIEEK (S) IIVEET(0.0)KS(0.99)NGQT(0.0)VIEEK K:TMT10,s:Phosphorylated S ARHGEF7 83311.3 9 13 434.1 313.68 HUMAN 1 -35.3402 -19.3238 IKAEAEGSPAAEPSP-p Q86V15;S981-p IKAEAEGSPAAEPSP 0.838230425758004 0.230573846376423 0.0416666666666667 0.142666666666667 1.48414145914587 8.39236413218099 0.0416666666666667 0.142666666666667 0.710535619304107 0.144798341246836 0.3912681645348 1.70259858105705 Q86V15 CASZ1 Q86V15.S981.p_CASZ1 Q86V15_S981s _1_1_981_981 Q86V15 Q86V15|Q86V15-2 Zinc finger protein castor homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32005.32005.4 15.25 15.25 2.268 4 1 1 0 984.5231 3855.0929 S981s TMT10 961 (K) MSQGNPGLGSLLNIKAEAEGsPAAEPSPFLGK (A) MS(0.0)QGNPGLGS(0.0)LLNIKAEAEGS(0.99)PAAEPS(0.0)PFLGK K:TMT10,s:Phosphorylated S CASZ1 193374.5 4 7 530.1 281.17 HUMAN 1 1.4841 8.3924 IKAGNSDSEEDDANG-p Q641Q2;S160-p IKAGNSDSEEDDANG 0.822556582247602 0.406840733051517 -0.042 0.179333333333333 1.63206165149394 5.19834395115446 -0.042 0.179333333333333 0.686742357235452 0.302110350597945 -0.425684592250594 1.14004631827158 Q641Q2 FAM21A Q641Q2.S160.p_FAM21A Q641Q2_S158sS160s_2_2_158_160 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2|Q9Y4E1-4|Q9Y4E1-2|E7ESD2|Q9Y4E1-6|Q9Y4E1-3|J3KP36|F8W7U3|A0A087WYF6|Q9Y4E1-5 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23735.23948.3 16.12 16.12 99 2 2 2 0 992.7916 2816.4314 S158s S160s TMT10 155 (K) AGNsDsEEDDANGRVELILEPK (D) AGNS(1.0)DS(1.0)EEDDANGRVELILEPK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 5 67 12.1 1178.3 HUMAN 1 -1.6321 5.1983 IKAGRRSSYLLAITT-p Q9P227;S611-p IKAGRRSSYLLAITT 0.138406999744561 0.235336697596906 -0.384333333333333 -0.134 17.5924248679391 8.27488268705204 -0.384333333333333 -0.134 0.017408346131147 0.148768755940613 -3.38024454629331 -1.68226221435239 Q9P227 ARHGAP23 Q9P227.S611.p_ARHGAP23 Q9P227_S611s _1_1_611_611 Q9P227 Q9P227 Rho GTPase-activating protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25612.25612.2 8.04 8.04 8.042 5 1 1 0 781.9045 1482.8365 S611s TMT10 610 (R) SsYLLAITTER (S) S(0.0)S(0.99)Y(0.0)LLAIT(0.0)T(0.0)ER s:Phosphorylated S ARHGAP23 163444.2 3 40 148.2 512.52 HUMAN 1 -17.5924 -8.2749 IKAKMQASIEKAH__-p P06748-3;S254-p IKAKMQASIEKAH__ 0.182149770013788 0.0161377331038498 1.52166666666667 -1.11533333333333 14.556042212197 24.7478605588378 1.52166666666667 -1.11533333333333 0.0350264222427958 0.00335130492001983 2.79559379073512 -4.97407294770357 P06748 NPM1 P06748.3.S254.p_NPM1 P06748-3_S254s _1_1_254_254 P06748-3 P06748-3 Isoform 3 of Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9009.9009.3 11.14 11.14 99 1 1 1 0 518.27 1472.8296 S254s TMT10 251 (K) MQAsIEKAH (-) MQAS(1.0)IEKAH K:TMT10,s:Phosphorylated S NPM1 28513.8 1 29 78.2 640.75 HUMAN 1 14.556 -24.7479 IKAKMQASIEKGGSL-p P06748;S254-p IKAKMQASIEKGGSL 0.120260347431319 0.00246806285089052 0.627 -1.823 19.1167867601429 39.9406232964118 0.627 -1.823 0.0122552259844915 0.000101376588032334 3.69191465096864 -10.1046862120531 P06748 NPM1 P06748.S254.p_NPM1 P06748_S254s _1_1_254_254 P06748 P06748|P06748-2 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16613.16613.5 16.52 16.52 3.51 2 1 1 0 554.7216 2689.6092 S254s TMT10 251 (K) MQAsIEKGGSLPKVEAK (F) MQAS(0.99)IEKGGS(0.0)LPKVEAK K:TMT10,s:Phosphorylated S NPM1 32745.6 13 22 78.1 640.75 HUMAN 1 19.1168 -39.9406 IKAPKRETPDENGKT-p Q5VWQ0;T236-p IKAPKRETPDENGKT 0.0926215668648561 0.256409718247152 -0.6 0.134 22.0029449237554 7.78453959569626 -0.6 0.134 0.00630529641273737 0.16655053819974 -4.32260275931392 1.5972683544266 Q5VWQ0 RSBN1 Q5VWQ0.T236.p_RSBN1 Q5VWQ0_T236t _1_1_236_236 Q5VWQ0 Q5VWQ0|A0A087WWP8|A0A0C4DGT8|Q5VWQ0-4|A0A0C4DH79 Lysine-specific demethylase 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4563.4563.4 10.63 6.52 99 1 1 1 0 528.0374 2029.1645 T236t TMT10 231 (K) APKREtPDENGK (T) APKRET(1.0)PDENGK K:TMT10,t:Phosphorylated T RSBN1 90983.5 2 2 2654.1 75.05 HUMAN 1 -22.0029 7.7845 IKAQFRQSWPTKIDV-p Q9NRH2;S362-p IKAQFRQSWPTKIDV 0.0291289577020664 0.813515904765668 -0.878333333333333 -0.0306666666666666 35.9409316277562 1.25525629982776 -0.878333333333334 -0.0306666666666666 0.000254628397733153 0.748987155567475 -8.46413026232231 -0.33670120566101 Q9NRH2 SNRK Q9NRH2.S362.p_SNRK Q9NRH2_S362s _1_1_362_362 Q9NRH2 Q9NRH2|E7EUC4 SNF-related serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13839.14156.3 14.26 14.26 3.576 2 1 1 0 596.3188 1706.9742 S362s TMT10 357 (K) AQFRQsWPTK (I) AQFRQS(0.99)WPT(0.0)K K:TMT10,s:Phosphorylated S SNRK 85187.6 2 2 3054.1 62.03 HUMAN 1 -35.9409 -1.2553 IKAQPSMSPKKAPPA-p Q969S3;S143-p IKAQPSMSPKKAPPA 0.187254795627764 0.00111242594804232 -0.222666666666667 -1.24966666666667 14.2853408811728 49.5788762985407 -0.225344971032034 -1.24966666666667 0.0372791423101011 1.10182436070612e-05 -2.74545968269292 -15.4087324419055 Q969S3 ZNF622 Q969S3.S143.p_ZNF622 Q969S3_S143s _1_1_143_143 Q969S3 Q969S3 Zinc finger protein 622 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8600.8600.2 10.81 5.98 2.467 2 1 1 0 692.3591 1303.7444 S143s TMT10 138 (K) AQPSMsPK (K) AQPS(0.0)MS(0.99)PK K:TMT10,s:Phosphorylated S ZNF622 54841.6 16 2 3697.1 45.06 HUMAN 1 -14.2853 -49.5789 IKARKLSSAMSAAKA-p P40925-3;S260-p IKARKLSSAMSAAKA 0.953576544254707 0.0691840223047494 -0.0116666666666667 0.272 0.405449726160077 15.425141570921 -0.0116666666666667 0.272 0.910867124108019 0.0286738390333763 -0.117281610870812 2.9565769278077 P40925 MDH1 P40925.3.S260.p_MDH1 P40925-3_S260s _1_1_260_260 P40925-3 P40925-3|P40925-2|B9A041|B8ZZ51 Isoform 3 of Malate dehydrogenase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13439.13439.3 9.12 9.12 1.173 3 1 1 0 587.6699 1681.0285 S260s TMT10 257 (R) KLSsAMSAAK (A) KLS(0.0)S(0.99)AMS(0.0)AAK K:TMT10,s:Phosphorylated S MDH1 38912.2 12 3 2746.1 71.96 HUMAN 1 -0.4054 15.4251 IKAVPRKSLKDPNNS-p Q9H3U1;S327-p IKAVPRKSLKDPNNS 0.992821359885708 0.0168024029770629 0.00166666666666665 0.406666666666667 0.0641555161193241 24.4943712917192 0.00166666666666665 0.406666666666667 0.985336222410955 0.0035527354608797 0.0192438601247265 4.91087752724599 Q9H3U1 UNC45A Q9H3U1.S327.p_UNC45A Q9H3U1_S327s _1_1_327_327 Q9H3U1 A0A1W2PNX8|Q9H3U1|Q9H3U1-2 Protein unc-45 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32437.32437.4 19.01 19.01 2.983 3 1 1 0 727.9099 2828.6489 S327s TMT10 327 (K) sLKDPNNSLTLWVIDQGLK (K) S(0.99)LKDPNNS(0.0)LT(0.0)LWVIDQGLK K:TMT10,s:Phosphorylated S UNC45A 104330.3 2 2 2206.1 93.47 HUMAN 1 0.0642 24.4944 IKCSPSESPLMEKKN-p Q8WUM9;S269-p IKCSPSESPLMEKKN 0.014110712010784 0.00106814256462013 -1.134 -1.13933333333333 44.7536613132935 50.2913385470139 -1.134 -1.13933333333333 3.3468316603474e-05 9.35117415468186e-06 -12.5245333121422 -15.8912523067991 Q8WUM9 SLC20A1 Q8WUM9.S269.p_SLC20A1 Q8WUM9_S269s _1_1_269_269 Q8WUM9 Q8WUM9 Sodium-dependent phosphate transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14004.14004.2 11.28 11.28 2.479 3 1 1 0 901.927 1722.8807 S269s TMT10 264 (K) CSPSEsPLMEK (K) CS(0.0)PS(0.0)ES(0.99)PLMEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLC20A1 74440.1 3 2 2551.1 78.92 HUMAN 1 -44.7537 -50.2913 IKDGIQKSPCSEPQE-p O60673;S2171-p IKDGIQKSPCSEPQE 0.660585362937783 0.425416183583414 -0.0686666666666667 0.0796666666666667 3.36949881963158 4.93979259632015 -0.0686666666666667 0.0796666666666667 0.460309690735524 0.320642244824138 -0.794512447781687 1.09279452132117 O60673 REV3L O60673.S2171.p_REV3L O60673_S2171s _1_1_2171_2171 O60673 O60673|O60673-2 DNA polymerase zeta catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21059.21059.3 13.98 13.98 1.195 4 1 1 0 1035.201 3023.6236 S2171s TMT10 2166 (K) DGIQKsPCSEPQEPLVISPINTR (A) DGIQKS(0.99)PCS(0.0)EPQEPLVIS(0.0)PINT(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S REV3L 356192.6 2 12 524.1 282.7 HUMAN 1 -3.3695 4.9398 IKDQDRKSRLMGLEA-p P48643;S26-p IKDQDRKSRLMGLEA 0.134264480831341 0.0699945357915653 -0.316333333333333 -0.257 17.906087947471 15.3554129099903 -0.316333333333333 -0.257 0.0161953823391525 0.029137930896959 -3.44328421010553 -2.94340199227765 P48643 CCT5 P48643.S26.p_CCT5 P48643_S26s _1_1_26_26 P48643 P48643|E7ENZ3|D6RIZ7 T-complex protein 1 subunit epsilon HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21039.21039.3 10.86 5.58 99 1 1 1 0 552.6487 1575.9657 S26s TMT10 26 (K) sRLMGLEALK (S) S(1.0)RLMGLEALK K:TMT10,s:Phosphorylated S CCT5 60126.4 5 2 1610.1 127.7 HUMAN 1 -17.9061 -15.3554 IKDTCIQSPSKECQK-p Q03188;S73-p IKDTCIQSPSKECQK 0.153364244244344 0.0013882827676627 -0.282666666666667 -0.920666666666667 16.3686027085798 46.3220077433707 -0.282666666666667 -0.920666666666667 0.0230748947690432 2.3323795539455e-05 -3.13928966453455 -13.376190416423 Q03188 CENPC Q03188.S73.p_CENPC Q03188_S73s _1_1_73_73 Q03188 Q03188|Q03188-2 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12441.12441.4 14.51 14.51 3.68 3 1 1 0 511.7839 1964.1454 S73s TMT10 66 (K) IKDTCIQsPSK (E) IKDT(0.0)CIQS(0.99)PS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CENPC 107459.5 6 3 209.1 442.77 HUMAN 1 -16.3686 -46.322 IKEASPESEDEEEAL-p Q8N9B5;S974-p IKEASPESEDEEEAL 0.910119524011783 0.913549933311602 -0.0166666666666667 0.016 0.802371745575075 0.550692629767361 -0.0166666666666667 0.016 0.831309656773579 0.880908371103851 -0.223543334862622 0.157022921277942 Q8N9B5 JMY Q8N9B5.S974.p_JMY Q8N9B5_S974s _1_1_974_974 Q8N9B5 Q8N9B5|Q8N9B5-2 Junction-mediating and -regulatory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21785.21785.3 19.7 19.7 3.356 3 1 1 0 1039.4606 3036.4032 S974s TMT10 967 (R) IKEASPEsEDEEEALPCTDWEN (-) IKEAS(0.0)PES(0.99)EDEEEALPCT(0.0)DWEN K:TMT10,C:Carbamidomethylation,s:Phosphorylated S JMY 112127.7 4 13 1120.1 175.11 HUMAN 1 -0.8024 0.5507 IKEEPVLTPIDEGHL-p P24723;T656-p IKEEPVLTPIDEGHL 0.896759135801194 0.490874765881212 0.02 0.066 0.928367805138806 4.12958644641679 0.02 0.066 0.807538467787684 0.386403770304346 0.2558124519279 0.941657203670899 P24723 PRKCH P24723.T656.p_PRKCH P24723_T656t _1_1_656_656 P24723 P24723|P24723-2 Protein kinase C eta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28886.28886.5 23.7 18.9 9.519 3 1 1 0 954.2678 4687.339 T656t TMT10 637 (K) SREDVSNFDPDFIKEEPVLtPIDEGHLPMINQDEFR (N) S(0.0)REDVS(0.0)NFDPDFIKEEPVLT(0.99)PIDEGHLPMINQDEFR K:TMT10,t:Phosphorylated T PRKCH 79196.4 10 5 1569.1 130.79 HUMAN 1 0.9284 4.1296 IKEIKVNSSRKEDDF-p P35251;S47-p IKEIKVNSSRKEDDF 0.131504655206906 0.00742299230658759 -0.275666666666667 -0.646 18.2093459506754 30.4492259199062 -0.275666666666667 -0.646 0.0151030758999891 0.000901731846640691 -3.50475741957502 -6.55937193500564 P35251 RFC1 P35251.S47.p_RFC1 P35251_S47s _1_1_47_47 P35251 P35251|P35251-2|E0CX09 Replication factor C subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8301.8301.4 10.4 6.78 1.675 2 1 1 0 523.7811 2012.138 S47s TMT10 45 (K) VNsSRKEDDFK (Q) VNS(0.99)S(0.0)RKEDDFK K:TMT10,s:Phosphorylated S RFC1 128765.8 1 2 316.1 367.51 HUMAN 1 -18.2093 -30.4492 IKEKGSFSDTGLGDG-p Q9Y2W1;S379-p IKEKGSFSDTGLGDG 0.367277640643147 0.341167016339534 0.122 0.0966666666666667 8.07323006121135 6.18573336137803 0.122 0.0966666666666667 0.15583930183248 0.240672607847661 1.64786173794173 1.31726123735025 Q9Y2W1 THRAP3 Q9Y2W1.S379.p_THRAP3 Q9Y2W1_S379s _1_1_379_379 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13633.13633.2 16.78 11.54 1.321 3 1 1 0 1083.0579 2085.1431 S379s TMT10 374 (K) EKGSFsDTGLGDGK (M) EKGS(0.0)FS(0.99)DT(0.0)GLGDGK K:TMT10,s:Phosphorylated S THRAP3 108720.9 15 67 10.2 1293.04 HUMAN 1 8.0732 6.1857 IKEKLAGSPIRTSED-p Q8WXG6;S1270-p IKEKLAGSPIRTSED 0.554473387606353 0.0142923642473555 0.118333333333333 -0.511333333333333 4.72901392684369 25.5796744148958 0.118333333333333 -0.511333333333333 0.336587983585837 0.00276714908731811 1.05415604543732 -5.1854360864307 Q8WXG6 MADD Q8WXG6.S1270.p_MADD Q8WXG6_S1270s _1_1_1270_1270 Q8WXG6 Q8WXG6|Q8WXG6-2|A0A0A0MRB5|Q8WXG6-3|Q8WXG6-7|Q8WXG6-4|Q8WXG6-5|Q8WXG6-8|Q8WXG6-6|F8W8U2 MAP kinase-activating death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10811.10811.3 13.91 8.74 2.085 4 1 1 0 642.3279 1845.0028 S1270s TMT10 1267 (K) LAGsPIRTSEDVSQR (V) LAGS(0.99)PIRT(0.0)S(0.0)EDVS(0.0)QR s:Phosphorylated S MADD 184612.2 3 12 546.1 275.73 HUMAN 1 4.729 -25.5797 IKEKLNLSCIHSPVV-p Q9Y2X3;S105-p IKEKLNLSCIHSPVV 0.597596307544804 0.332052623829058 0.071 0.106333333333333 4.13126667700639 6.34376264358689 0.071 0.106333333333333 0.386254304472929 0.232072529350725 0.942139631355533 1.34524165219001 Q9Y2X3 NOP58 Q9Y2X3.S105.p_NOP58 Q9Y2X3_S105s _1_1_105_105 Q9Y2X3 Q9Y2X3 Nucleolar protein 58 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27526.27526.3 12.36 12.36 3.245 2 1 1 0 731.0374 2111.1303 S105s TMT10 102 (K) LNLsCIHSPVVNELMR (G) LNLS(0.99)CIHS(0.0)PVVNELMR C:Carbamidomethylation,s:Phosphorylated S NOP58 60090.6 1 2 481.1 298.21 HUMAN 1 4.1313 6.3438 IKELLQMSLEKKEKK-p Q9NXE8;S170-p IKELLQMSLEKKEKK 0.103884021690019 0.00995818873389551 -0.402333333333333 -0.511 20.762519895696 28.1294737682754 -0.402333333333333 -0.511 0.00838973050092314 0.00153834102876608 -4.04454012345916 -5.87403692267578 Q9NXE8 CWC25 Q9NXE8.S170.p_CWC25 Q9NXE8_S170s _1_1_170_170 Q9NXE8 Q9NXE8 Pre-mRNA-splicing factor CWC25 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24917.24917.3 7.15 3.52 99 1 1 1 0 543.6299 1548.9071 S170s TMT10 165 (K) ELLQMsLEK (K) ELLQMS(1.0)LEK K:TMT10,s:Phosphorylated S CWC25 49703.7 1 12 1099.2 177.93 HUMAN 1 -20.7625 -28.1295 IKFNVWDTAGQEKFG-p B5MDF5;T66-p IKFNVWDTAGQEKFG 0.996421434325015 0.09935172789892 0.000999999999999992 0.212333333333333 0.0280453219333746 13.2517221277632 0.000999999999999973 0.212333333333333 0.99356313194554 0.0472963675323878 0.00844685998064816 2.55509193376966 B5MDF5 NotFound B5MDF5.T66.p_NotFound B5MDF5_T66t _1_1_66_66 B5MDF5 B5MDF5|P62826 GTP-binding nuclear protein Ran HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21712.21712.3 9.61 9.61 99 1 1 1 0 611.6351 1752.9321 T66t TMT10 61 (K) FNVWDtAGQEK (F) FNVWDT(1.0)AGQEK K:TMT10,t:Phosphorylated T RAN 26394.9 1 2 4221.1 35.16 HUMAN 1 0.028 13.2517 IKGDMDISVPKLEGD-p Q09666;S4540-p IKGDMDISVPKLEGD 0.145152146047681 0.0268584189891589 -0.368333333333333 0.341666666666667 17.113750190111 21.3232643145606 -0.368333333333333 0.341666666666667 0.0194368096261853 0.00737349802984057 -3.28507255590811 4.16463857408771 Q09666 AHNAK Q09666.S4540.p_AHNAK Q09666_S4540s _1_1_4540_4540 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24852.24852.4 13.38 13.38 99 1 1 1 0 714.4122 2774.6508 S4540s TMT10 4533 (K) IKGDMDIsVPKLEGDLK (G) IKGDMDIS(1.0)VPKLEGDLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 100 1.1 4313.36 HUMAN 1 -17.1138 21.3233 IKGGLKGSEVGFHGA-p Q09666;S5530-p IKGGLKGSEVGFHGA 0.518846820664332 0.985750472400065 0.125333333333333 0.00366666666666671 5.26453689000458 0.0928006281056538 0.125333333333333 0.00366666666666669 0.297540652449064 0.978858546836653 1.15232241385473 0.0277444287504607 Q09666 AHNAK Q09666.S5530.p_AHNAK Q09666_S5530s _1_1_5530_5530 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18291.18291.4 21.69 21.69 11.414 2 1 1 0 674.1227 2613.4967 S5530s TMT10 5525 (K) GGLKGsEVGFHGAAPDISVK (G) GGLKGS(0.99)EVGFHGAAPDIS(0.0)VK K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 144 1.1 4313.36 HUMAN 1 5.2645 0.0928 IKGIEGHSPGNLPKF-p Q96GY0;S292-p IKGIEGHSPGNLPKF 0.319535922328883 0.146693364727905 -0.149 -0.385 9.27661676686393 10.9775068747121 -0.149 -0.385 0.118124048517385 0.0798452918255553 -1.85625773051702 -2.15120164338424 Q96GY0 ZC2HC1A Q96GY0.S292.p_ZC2HC1A Q96GY0_S292s _1_1_292_292 Q96GY0 Q96GY0 Zinc finger C2HC domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10602.10602.3 17.01 17.01 99 1 1 1 0 581.978 1663.9532 S292s TMT10 287 (K) GIEGHsPGNLPK (F) GIEGHS(1.0)PGNLPK K:TMT10,s:Phosphorylated S ZC2HC1A 35776.2 2 2 4657.1 28.3 HUMAN 1 -9.2766 -10.9775 IKGRLDSSEMDHSEN-p Q9NTI5;S1177-p IKGRLDSSEMDHSEN 0.807190843839437 0.0400978302262368 -0.039 0.262 1.79105030433618 18.7289990730445 -0.039 0.262 0.662056371626129 0.0133998548090546 -0.462014773461552 3.6082269487308 Q9NTI5 PDS5B Q9NTI5.S1177.p_PDS5B Q9NTI5_S1176sS1177sS1182s_3_3_1176_1182 Q9NTI5 Q9NTI5-2 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17281.17281.4 12.63 12.63 2.7 7 3 3 0 960.1747 3597.7768 S1176s S1177s S1182s TMT10 1172 (K) GRLDssEMDHsENEDYTMSSPLPGKK (S) GRLDS(0.99)S(0.99)EMDHS(0.99)ENEDY(0.0)T(0.0)MS(0.0)S(0.0)PLPGKK K:TMT10,s:Phosphorylated S PDS5B 165919.5 5 26 100.1 597.99 HUMAN 1 -1.7911 18.729 IKGTQVYSPEKGRWT-p O75643;S835-p IKGTQVYSPEKGRWT 0.34060089205646 0.407365387617128 -0.151333333333333 0.0926666666666667 8.7004406493832 5.19089021646079 -0.151333333333333 0.0926666666666667 0.134882601934976 0.302629303522966 -1.75650865052277 1.13868977925515 O75643 SNRNP200 O75643.S835.p_SNRNP200 O75643_S835s _1_1_835_835 O75643 O75643 U5 small nuclear ribonucleoprotein 200 kDa helicase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9935.9935.3 7.16 7.16 4.029 3 1 1 0 516.2704 1466.8255 S835s TMT10 830 (K) GTQVYsPEK (G) GT(0.0)QVY(0.0)S(0.99)PEK K:TMT10,s:Phosphorylated S SNRNP200 246157.8 1 4 2427.1 83.94 HUMAN 1 -8.7004 5.1909 IKHQRTHTGERPYKC-p Q9H5H4;T312-p IKHQRTHTGERPYKC 0.26937080367531 0.00606823738401418 -0.225666666666667 -0.830666666666667 10.8028256007036 31.9922659708172 -0.225666666666667 -0.830666666666667 0.0831222786124013 0.000632081970828115 -2.12160074298733 -7.04977136958287 Q9H5H4 ZNF768 Q9H5H4.T312.p_ZNF768 Q9H5H4_T312t _1_1_312_312 Q9H5H4 Q5EBL2|A0A087WSX5|Q9UEG4|Q9HBT7|Q6ECI4|Q6ZMW2|O14978|Q6ECI4-2|Q9H5H4|Q9UJL9|H3BS42|O60304|A8MWA4|Q6ZN79|P0CI00|P0CH99|A0A1W2PRR0|A8MVS1|A0A0G2JMF9|Q96BR6|O60304-2|Q9UJL9-2|Q6U7Q0|Q96BR6-2|L0B3Z2|A0A087X1C2|L0B1V4|B4DI05|Q13127-3|A0A1W2PQA1|L0B1S6 Zinc finger protein 768 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3814.3814.4 11.23 11.23 2.706 3 1 1 0 407.4659 1546.8742 T312t TMT10 310 (R) THtGERPYK (C) T(0.0)HT(0.99)GERPY(0.0)K K:TMT10,t:Phosphorylated T ZNF768 61482.8 2 140 240.2 415.72 HUMAN 1 -10.8028 -31.9923 IKIEHAPSPSSGGTL-p Q14004-2;S525-p IKIEHAPSPSSGGTL 0.675953190261373 0.00973894720564179 -0.062 0.442333333333333 3.1870241109038 28.3183876289285 -0.062 0.442333333333333 0.480062286057923 0.00147285921783271 -0.75814962651045 5.92765374716476 Q14004 CDK13 Q14004.2.S525.p_CDK13 Q14004-2_S525s _1_1_525_525 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13331.13331.3 19.44 15.36 2.702 4 1 1 0 797.1203 2309.3796 S525s TMT10 518 (K) IKIEHAPsPSSGGTLK (N) IKIEHAPS(0.99)PS(0.0)S(0.0)GGT(0.0)LK K:TMT10,s:Phosphorylated S CDK13 159173.6 16 9 145.1 520.12 HUMAN 1 -3.187 28.3184 IKILVPKSPVKSRTA-p Q9Y232-2;S147-p IKILVPKSPVKSRTA 0.0853757907120037 0.00112006726578317 -0.384666666666667 -1.188 22.8748856001249 49.495592544987 -0.384666666666667 -1.188 0.00515835752803884 1.12315771723706e-05 -4.52491252934605 -15.3532569321361 Q9Y232 CDYL Q9Y232.2.S147.p_CDYL Q9Y232-2_S147s _1_1_147_147 Q9Y232-2 Q9Y232|Q9Y232-2|Q9Y232-4 Isoform 2 of Chromodomain Y-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19138.19138.2 12.8 12.8 99 1 1 1 0 874.5572 1668.1391 S147s TMT10 142 (K) ILVPKsPVK (S) ILVPKS(1.0)PVK K:TMT10,s:Phosphorylated S CDYL 61121.6 7 5 1110.1 176.05 HUMAN 1 -22.8749 -49.4956 IKITKERTPESEEEN-p Q5T200;T134-p IKITKERTPESEEEN 0.522539744732082 0.0176032432582518 -0.224 0.408666666666667 5.21220813147458 24.1694538593421 -0.224 0.408666666666667 0.301147447758794 0.00382872887908217 -1.14280799378192 4.83068419406106 Q5T200 ZC3H13 Q5T200.T134.p_ZC3H13 Q5T200_T134tS137s_2_2_134_137 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25319.25319.5 15.93 15.93 1.204 7 2 2 0 1041.8551 5045.2907 T134t S137s TMT10 132 (K) ERtPEsEEENVEWETNRDDSDNGDINYDYVHELSLEMK (R) ERT(0.99)PES(0.99)EEENVEWET(0.0)NRDDS(0.0)DNGDINY(0.0)DY(0.0)VHELS(0.0)LEMK K:TMT10,t:Phosphorylated T,s:Phosphorylated S ZC3H13 197316.7 3 31 24.1 987.82 HUMAN 1 -5.2122 24.1695 IKKAASPSPQSVRRV-p A9Z1X7;S749-p IKKAASPSPQSVRRV 0.428305896391522 0.973596765748086 0.109666666666667 -0.00333333333333332 6.78001186997158 0.163642042321719 0.109666666666667 -0.00333333333333332 0.209893414688871 0.963021084596088 1.42244780047782 -0.0485435011735391 A9Z1X7 NotFound A9Z1X7.S749.p_NotFound A9Z1X7_S747sS749s_2_2_747_749 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6524.7042.2 8.08 8.08 1.864 3 2 2 0 694.8124 1228.6847 S747s S749s TMT10 745 (K) AAsPsPQSVR (R) AAS(0.99)PS(0.99)PQS(0.0)VR s:Phosphorylated S SRRM1 103445.7 17 74 8.1 1346.57 HUMAN 1 6.78 -0.1636 IKKAKEETPKTDNTK-p Q7Z6E9;T1066-p IKKAKEETPKTDNTK 0.842669713504141 0.475098899209386 0.0283333333333333 -0.0876666666666667 1.43802577849956 4.31043060553014 0.0283333333333333 -0.0876666666666667 0.718120661308456 0.37064397039324 0.380409953947787 -0.975847936441795 Q7Z6E9 RBBP6 Q7Z6E9.T1066.p_RBBP6 Q7Z6E9_T1066t _1_1_1066_1066 Q7Z6E9 Q7Z6E9|Q7Z6E9-2 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5692.5692.3 9.88 4.15 8.543 3 1 1 0 786.7738 2278.3424 T1066t TMT10 1062 (K) AKEEtPKTDNTK (S) AKEET(0.99)PKT(0.0)DNT(0.0)K K:TMT10,t:Phosphorylated T RBBP6 202473.6 2 14 27.1 935.6 HUMAN 1 1.438 -4.3104 IKKESKSSPRPTAEK-p Q9UHB7;S620-p IKKESKSSPRPTAEK 0.133350942447308 0.0179249881425639 0.353 0.396666666666667 18.0200141119571 24.049720334886 0.353 0.396666666666667 0.0157760614342045 0.00393575419036028 3.46631688673249 4.80135888144915 Q9UHB7 AFF4 Q9UHB7.S620.p_AFF4 Q9UHB7_S620s _1_1_620_620 Q9UHB7 Q9UHB7|Q9UHB7-2 AF4/FMR2 family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4647.4647.4 8.76 6.15 1.354 4 1 1 0 521.7903 2004.1693 S620s TMT10 616 (K) ESKSsPRPTAEK (K) ES(0.0)KS(0.0)S(0.99)PRPT(0.0)AEK K:TMT10,s:Phosphorylated S AFF4 127856.3 12 12 137.1 525.98 HUMAN 1 18.02 24.0497 IKKGETQTL______-p O75223;T187-p IKKGETQTL______ 0.49414153350986 0.993064205785003 -0.139 0.00100000000000002 5.63735682318743 0.0427155532720816 -0.139 0.00100000000000004 0.273063918228737 0.990212591893489 -1.2196813901965 0.0128427137789409 O75223 GGCT O75223.T187.p_GGCT O75223_T187t _1_1_187_187 O75223 O75223|M0QZK8|O75223-3 Gamma-glutamylcyclotransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30459.30459.4 15.12 15.12 3.452 3 1 1 0 675.6248 2619.506 T187t TMT10 172 (K) VSEEIEDIIKKGETQtL (-) VS(0.0)EEIEDIIKKGET(0.0)QT(0.99)L K:TMT10,t:Phosphorylated T GGCT 21235.6 4 5 1818.1 112.92 HUMAN 1 -5.6374 0.0427 IKKIGHRSVDSSGET-p Q99755;S68-p IKKIGHRSVDSSGET 0.766023104823569 0.518246763658541 0.0476666666666667 0.0706666666666667 2.22136162858217 3.83441077692938 0.0476666666666667 0.0706666666666667 0.599603055294447 0.413579422361155 0.55728465322358 0.88519631876542 Q99755 PIP5K1A Q99755.S68.p_PIP5K1A Q99755_S68s _1_1_68_68 Q99755 Q99755|A6PW57 Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6637.6637.3 7.61 7.61 3.986 6 1 1 0 613.9766 1759.9478 S68s Hydrogen 68 (R) sVDSSGETTYKK (T) S(0.99)VDS(0.0)S(0.0)GET(0.0)T(0.0)Y(0.0)KK K:TMT10-Lys-Only,s:Phosphorylated S PIP5K1A 63088.6 1 1 3553.1 48.31 HUMAN 1 2.2214 3.8344 IKKKELNSPQMTPFK-p P51587;S3319-p IKKKELNSPQMTPFK 0.864479811481231 0.00112568182952083 -0.029 -1.42966666666667 1.23141350204549 49.0187938425467 -0.029 -1.42966666666667 0.753110408337677 1.25348925568882e-05 -0.330959469545517 -15.0393352077751 P51587 BRCA2 P51587.S3319.p_BRCA2 P51587_S3319s _1_1_3319_3319 P51587 P51587 Breast cancer type 2 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20953.20953.3 11.68 11.68 4.946 2 1 1 0 610.6471 1749.961 S3319s TMT10 3316 (K) ELNsPQMTPFK (K) ELNS(0.99)PQMT(0.0)PFK K:TMT10,s:Phosphorylated S BRCA2 388531.4 2 13 876.1 208.99 HUMAN 1 -1.2314 -49.0188 IKKPPQLSEDDIWLK-p Q9Y2D5-4;S200-p IKKPPQLSEDDIWLK 0.561383737409577 0.918839170050355 -0.088 0.0113333333333334 4.61526426706611 0.517836346618079 -0.088 0.0113333333333334 0.345520304117246 0.887598102925999 -1.03305655382073 0.148123543438513 Q9Y2D5 AKAP2 Q9Y2D5.4.S200.p_AKAP2 Q9Y2D5-4_S200s _1_1_200_200 Q9Y2D5-4 Q9Y2D5-4|Q9Y2D5-6 Isoform 3 of A-kinase anchor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24844.24844.3 13.62 13.62 99 1 1 1 0 779.4337 2256.3207 S200s TMT10 195 (K) KPPQLsEDDIWLK (S) KPPQLS(1.0)EDDIWLK K:TMT10,s:Phosphorylated S AKAP2 122582.3 1 7 779.1 226.39 HUMAN 1 -4.6153 0.5178 IKKSTYFSDEEELSD-p Q8TBF4;S210-p IKKSTYFSDEEELSD 0.805134921082359 0.00949153116870816 0.038 0.499666666666667 1.8140401397346 28.5413847957139 0.038 0.499666666666667 0.658560966366342 0.00139914111990598 0.467214382988896 5.99142898596591 Q8TBF4 ZCRB1 Q8TBF4.S210.p_ZCRB1 Q8TBF4_S210s _1_1_210_210 Q8TBF4 Q8TBF4|G3V1V1 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17210.17210.3 13.05 9.08 2.134 5 1 1 0 696.6547 2007.9799 S210s TMT10 205 (K) KSTYFsDEEELSD (-) KS(0.0)T(0.0)Y(0.0)FS(0.99)DEEELS(0.0)D K:TMT10,s:Phosphorylated S ZCRB1 24819.5 2 4 1826.1 112.48 HUMAN 1 1.814 28.5414 IKKWQELSPETSGKR-p Q9NWF9-1;S476-p IKKWQELSPETSGKR 0.137325721125408 0.0742781148277095 0.298666666666667 -0.255333333333333 17.6606156129614 14.9872746378961 0.298666666666667 -0.255333333333333 0.0171371437106815 0.0317155711070914 3.39390320947122 -2.87419128269179 Q9NWF9 RNF216 Q9NWF9.1.S476.p_RNF216 Q9NWF9-1_S476s _1_1_476_476 Q9NWF9-1 Q9NWF9-1 Isoform 2 of E3 ubiquitin-protein ligase RNF216 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15459.15459.3 12.23 12.23 2.626 3 1 1 0 719.7241 2077.1897 S476s TMT10 471 (K) KWQELsPETSGK (R) KWQELS(0.99)PET(0.0)S(0.0)GK K:TMT10,s:Phosphorylated S RNF216 107762.7 3 1 2855.1 68.03 HUMAN 1 17.6606 -14.9873 IKKYSPPSPGVQPFG-p P57682;S111-p IKKYSPPSPGVQPFG 0.58295315200104 0.763901106066931 0.085 0.0293333333333334 4.31175041556031 1.61559159955765 0.085 0.0293333333333334 0.370531349734349 0.689351682714858 0.976271352627337 0.42183698802501 P57682 KLF3 P57682.S111.p_KLF3 P57682_S111s _1_1_111_111 P57682 P57682|P57682-2 Krueppel-like factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.35728.35728.5 23.25 22.62 2.256 5 1 1 0 684.7645 3339.8362 S111s TMT10 106 (K) KYSPPsPGVQPFGVPLSMPPVMAAALSR (H) KY(0.0)S(0.0)PPS(0.99)PGVQPFGVPLS(0.0)MPPVMAAALS(0.0)R K:TMT10,s:Phosphorylated S KLF3 39170.3 10 26 394.2 330.8 HUMAN 1 4.3118 1.6156 IKLAEEGSDEDLDLV-p Q8NA03;S87-p IKLAEEGSDEDLDLV 0.53433256799454 0.173311531709846 -0.102 -0.148333333333333 5.04074466036189 10.0080352755888 -0.102 -0.148333333333333 0.313274852346299 0.0998151519968604 -1.11151957622842 -1.98230414221474 Q8NA03 FSIP1 Q8NA03.S87.p_FSIP1 Q8NA03_S87s _1_1_87_87 Q8NA03 Q8NA03 Fibrous sheath-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24058.24058.4 23.98 23.98 13.134 3 1 1 0 992.0024 3885.0042 S87s TMT10 80 (K) IKLAEEGsDEDLDLVQHQIISECSDEPK (L) IKLAEEGS(0.99)DEDLDLVQHQIIS(0.0)ECS(0.0)DEPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S FSIP1 66633.5 3 1 3695.1 45.07 HUMAN 1 -5.0407 -10.008 IKLEGPVSPDVEPGK-p O14686-3;S1671-p IKLEGPVSPDVEPGK 0.334308576365518 0.0989207754730153 -0.205666666666667 0.309666666666667 8.88238492499128 13.2804836786745 -0.205666666666667 0.309666666666667 0.129348532985049 0.0469841778881154 -1.78800325774622 2.56029244005497 O14686 KMT2D O14686.3.S1671.p_KMT2D O14686-3_S1671s _1_1_1671_1671 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18950.18950.5 22.97 19.85 7.093 3 1 1 0 922.4551 4528.2881 S1671s TMT10 1653 (K) GEGGVEHMECEIKLEGPVsPDVEPGKEETEESK (K) GEGGVEHMECEIKLEGPVS(0.99)PDVEPGKEET(0.0)EES(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2D 600227.3 3 13 17.1 1042.08 HUMAN 1 -8.8824 13.2805 IKLENEGSDEDIETD-p O60502;S364-p IKLENEGSDEDIETD 0.932405226886258 0.0863352608970145 0.0273333333333333 0.227333333333333 0.602397845590163 14.0831794758644 0.0273333333333333 0.227333333333333 0.870482842477533 0.039055486535043 0.170937725651738 2.70656787628362 O60502 MGEA5 O60502.S364.p_MGEA5 O60502_S364s _1_1_364_364 O60502 O60502|O60502-3 Protein O-GlcNAcase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30194.30194.3 18.89 18.89 4.554 4 1 1 0 1045.5017 3054.5229 S364s TMT10 359 (K) LENEGsDEDIETDVLYSPQMALK (L) LENEGS(0.99)DEDIET(0.0)DVLY(0.0)S(0.0)PQMALK K:TMT10,s:Phosphorylated S MGEA5 103997.3 5 1 1909.1 107.89 HUMAN 1 0.6024 14.0832 IKLGFSLTPSKGKTS-p P38432;T303-p IKLGFSLTPSKGKTS 0.14735900064828 0.000952253650599092 -0.299666666666667 -1.408 16.8840680218001 53.7144926360208 -0.299666666666667 -1.408 0.0204924176167839 4.25158372976587e-06 -3.23983573588857 -18.4206535341406 P38432 COIL P38432.T303.p_COIL P38432_T303t _1_1_303_303 P38432 P38432 Coilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24204.24389.3 14.26 11.8 3.881 3 1 1 0 496.613 1407.8612 T303t TMT10 298 (K) LGFSLtPSK (G) LGFS(0.0)LT(0.99)PS(0.0)K K:TMT10,t:Phosphorylated T COIL 63291.8 8 12 395.1 330.42 HUMAN 1 -16.8841 -53.7145 IKLGGFGSKRKRSSS-p F5GWX5;S296-p IKLGGFGSKRKRSSS 0.0635108641161859 0.00491273914208409 0.563 -0.545333333333333 25.9911301973668 33.6843531560854 0.563 -0.545333333333333 0.00251702181890171 0.000428119179471642 5.29925935302696 -7.62220839801706 F5GWX5 CHD4 F5GWX5.S296.p_CHD4 F5GWX5_S296s _1_1_296_296 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19376.19376.3 11.5 11.5 99 1 1 1 0 558.6713 1594.0295 S296s TMT10 289 (K) IKLGGFGsK (R) IKLGGFGS(1.0)K K:TMT10,s:Phosphorylated S CHD4 218583 4 4 49.1 753.68 HUMAN 1 25.9911 -33.6844 IKLGPNGSPRRAWGK-p Q96PY6-3;S826-p IKLGPNGSPRRAWGK 0.678406079018471 0.544041161038409 0.0583333333333333 -0.057 3.15390730971557 3.55537281052294 0.0583333333333333 -0.057 0.483736957808776 0.441024502720345 0.751502946602871 -0.83099403608891 Q96PY6 NEK1 Q96PY6.3.S826.p_NEK1 Q96PY6-3_S826s _1_1_826_826 Q96PY6-3 Q96PY6-3|Q96PY6-6|Q96PY6-2|Q96PY6-4 Isoform 3 of Serine/threonine-protein kinase Nek1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6733.6733.2 9.55 4.82 99 1 1 1 0 553.7812 1026.5894 S826s TMT10 821 (K) LGPNGsPR (R) LGPNGS(1.0)PR s:Phosphorylated S NEK1 146666.9 3 2 1537.1 133.31 HUMAN 1 3.1539 -3.5554 IKLQTPNTFPKRKKG-p Q14978-3;T611-p IKLQTPNTFPKRKKG 0.699407107617201 0.0128152506956125 -0.0533333333333333 -0.569666666666667 2.91847388077248 26.3662100520586 -0.0533333333333334 -0.569666666666667 0.51068442394505 0.00230876109123586 -0.703804217136113 -5.39111469772399 Q14978 NOLC1 Q14978.3.T611.p_NOLC1 Q14978-3_T611t _1_1_611_611 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18688.18688.3 10.03 9.53 2.966 2 1 1 0 528.6249 1503.8935 T611t TMT10 606 (K) LQTPNtFPK (R) LQT(0.0)PNT(0.99)FPK K:TMT10,t:Phosphorylated T NOLC1 73744 4 19 72.1 655.55 HUMAN 1 -2.9185 -26.3662 IKNSFLGSPRFHRRK-p Q8IWQ3-5;S535-p IKNSFLGSPRFHRRK 0.307290133537941 0.266488361814102 0.177333333333333 -0.114666666666667 9.57843328889888 7.56180523077023 0.177333333333333 -0.114666666666667 0.110193675994955 0.17531516182768 1.90855355721206 -1.55857343996998 Q8IWQ3 BRSK2 Q8IWQ3.5.S535.p_BRSK2 Q8IWQ3-5_S535s _1_1_535_535 Q8IWQ3-5 Q8TDC3-2|Q8IWQ3-5|Q8IWQ3-4 Isoform 5 of Serine/threonine-protein kinase BRSK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12462.12462.2 11.92 6.6 5.481 2 1 1 0 593.7949 1106.6156 S535s TMT10 530 (K) NSFLGsPR (F) NS(0.0)FLGS(0.99)PR s:Phosphorylated S BRSK2 85686.4 1 3 380.2 335.31 HUMAN 1 9.5784 -7.5618 IKNSKHNTPRKKTNP-p P51956;T288-p IKNSKHNTPRKKTNP 0.0360961121648541 0.0022667499771214 0.709 -0.757666666666667 33.1208298283601 40.9032892594346 0.709 -0.757666666666667 0.000487435344476252 8.12215127679689e-05 7.4407806764321 -10.5452072173991 P51956 NEK3 P51956.T288.p_NEK3 P51956_S284sT288t_2_2_284_288 P51956 P51956|A0A087WY58|P51956-2|A0A087X203 Serine/threonine-protein kinase Nek3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.34353.34353.5 11.66 7.3 1.131 3 2 2 0 815.4047 3913.0807 S284s T288t TMT10 264 (K) CLPPEIIMEYGEEVLEEIKNsKHNtPR (K) CLPPEIIMEY(0.0)GEEVLEEIKNS(0.99)KHNT(0.99)PR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T NEK3 58217.1 2 3 3370.1 52.68 HUMAN 1 33.1208 -40.9033 IKNSSLLSFDNEDEN-p Q96AT1;S146-p IKNSSLLSFDNEDEN 0.660412515639265 0.82086371986083 -0.0596666666666667 0.0293333333333334 3.37538976662431 1.19994300585072 -0.0596666666666667 0.0293333333333334 0.459685731226575 0.758587530202239 -0.795679244737837 0.323273701630238 Q96AT1 KIAA1143 Q96AT1.S146.p_KIAA1143 Q96AT1_S146s _1_1_146_146 Q96AT1 Q96AT1 Uncharacterized protein KIAA1143 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23594.23594.2 11.87 11.87 5.552 3 1 1 0 961.3989 1841.8238 S146s TMT10 141 (K) NSSLLsFDNEDENE (-) NS(0.0)S(0.0)LLS(0.99)FDNEDENE s:Phosphorylated S KIAA1143 17465.1 4 3 1951.1 105.34 HUMAN 1 -3.3754 1.1999 IKPLGAISPVLNRKL-p Q8NEN9;S538-p IKPLGAISPVLNRKL 0.437144947936803 0.490533245909081 -0.11 -0.0713333333333333 6.61921370760364 4.13398688532197 -0.11 -0.0713333333333333 0.217810408352313 0.386012449410913 -1.39417972436475 -0.942492626661264 Q8NEN9 PDZD8 Q8NEN9.S538.p_PDZD8 Q8NEN9_S538s _1_1_538_538 Q8NEN9 Q8NEN9 PDZ domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24818.24818.3 13.58 13.58 6.239 4 1 1 0 890.8658 2590.6172 S538s TMT10 524 (K) RVPTTLSIKPLGAIsPVLNR (K) RVPT(0.0)T(0.0)LS(0.0)IKPLGAIS(0.99)PVLNR K:TMT10,s:Phosphorylated S PDZD8 129759.1 9 2 1977.1 104.58 HUMAN 1 -6.6192 -4.134 IKQCLNQSQNFAEEM-p P49454;S519-p IKQCLNQSQNFAEEM 0.397533036246793 0.0805568106252645 0.121 -0.216666666666667 7.39488942182514 14.5111868627767 0.121 -0.216666666666667 0.182184345948828 0.0353900612048177 1.52997468840202 -2.78552119795118 P49454 CENPF P49454.S519.p_CENPF P49454_S519s _1_1_519_519 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17072.17072.3 9.32 9.32 99 1 1 1 0 755.6866 2185.0782 S519s TMT10 514 (K) QCLNQsQNFAEEMK (A) QCLNQS(1.0)QNFAEEMK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CENPF 371067.2 1 5 47.1 771.73 HUMAN 1 7.3949 -14.5112 IKQYDFHSSDEDEFP-p Q52LR7;S372-p IKQYDFHSSDEDEFP 0.459299895698651 0.0823409353972692 0.119333333333333 0.257333333333333 6.22931609051566 14.3662998459662 0.119333333333333 0.257333333333333 0.238269465698864 0.0365906408161821 1.32531332535774 2.7587157479737 Q52LR7 EPC2 Q52LR7.S372.p_EPC2 Q52LR7_S372sS373s_2_2_372_373 Q52LR7 Q52LR7 Enhancer of polycomb homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28990.28990.4 8.88 8.88 1.282 5 2 2 0 1115.4547 4297.8618 S372s S373s N392n TMT10 367 (K) QYDFHssDEDEFPQVLSPVSEPEEEnDPDGPCAFR (R) QY(0.0)DFHS(0.99)S(0.99)DEDEFPQVLS(0.0)PVS(0.0)EPEEEN(1.0)DPDGPCAFR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated EPC2 91949.1 1 5 1676.1 121.76 HUMAN 1 6.2293 14.3663 IKRDKSDSPAIQLRL-p Q96ST3;S940-p IKRDKSDSPAIQLRL 0.56180416027387 0.0147632630255603 0.0816666666666667 0.375666666666667 4.60854053009262 25.3550021545458 0.0816666666666667 0.375666666666667 0.346055652146299 0.0029140686890937 1.03180638219901 5.12773463274217 Q96ST3 SIN3A Q96ST3.S940.p_SIN3A Q96ST3_S940s _1_1_940_940 Q96ST3 Q96ST3 Paired amphipathic helix protein Sin3a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10902.10902.2 12.83 9.04 1.263 2 1 1 0 884.4745 1687.9743 S940s TMT10 936 (R) DKSDsPAIQLR (L) DKS(0.0)DS(0.99)PAIQLR K:TMT10,s:Phosphorylated S SIN3A 145971.2 4 13 501.1 291.36 HUMAN 1 4.6085 25.355 IKRKAEDSDSEPEPE-p Q9H0D6;S499-p IKRKAEDSDSEPEPE 0.843942307663143 0.0110133649869695 0.0306666666666667 0.494666666666667 1.42667540662838 27.4320923040896 0.0306666666666667 0.494666666666667 0.71999993850312 0.00180630369194085 0.377727748338871 5.67931192446545 Q9H0D6 XRN2 Q9H0D6.S499.p_XRN2 Q9H0D6_S499s _1_1_499_499 Q9H0D6 Q9H0D6|Q9H0D6-2 5'-3' exoribonuclease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21520.21520.4 8.66 8.66 1.332 2 1 1 0 864.4265 3374.7108 S499s TMT10 495 (R) KAEDsDSEPEPEDNVRLWEAGWK (Q) KAEDS(0.99)DS(0.0)EPEPEDNVRLWEAGWK K:TMT10,s:Phosphorylated S XRN2 109493.4 9 7 608.1 262.16 HUMAN 1 1.4267 27.4321 IKRKREVSPPGARTR-p Q8NFC6;S3029-p IKRKREVSPPGARTR 0.9103196866432 0.0691536351937514 -0.0223333333333333 0.237666666666667 0.800031996603344 15.4283579490956 -0.0223333333333333 0.237666666666667 0.831757643113822 0.0286526110944687 -0.22293793490073 2.95718516322286 Q8NFC6 BOD1L1 Q8NFC6.S3029.p_BOD1L1 Q8NFC6_S3029s _1_1_3029_3029 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6893.7101.2 12.01 7.74 99 1 1 1 0 561.2814 1041.589 S3029s TMT10 3027 (R) EVsPPGAR (T) EVS(1.0)PPGAR s:Phosphorylated S BOD1L1 332628.7 3 27 97.1 603.4 HUMAN 1 -0.8 15.4284 IKRVSADSEEDSDEQ-p Q8TF30;S795-p IKRVSADSEEDSDEQ 0.134264480831341 0.306100986977818 -0.593 -0.123 17.9101546552842 6.79286031993515 -0.593 -0.123 0.01618022417714 0.209273370023785 -3.44410512686082 -1.42432163426141 Q8TF30 WHAMM Q8TF30.S795.p_WHAMM Q8TF30_S795sS799s_2_2_795_799 Q8TF30 Q8TF30 WASP homolog-associated protein with actin, membranes and microtubules HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12915.12915.2 7.7 7.7 1.611 3 2 2 0 1305.9922 2451.0382 S795s S799s TMT10 790 (K) RVSADsEEDsDEQDPGQWDG (-) RVS(0.0)ADS(0.99)EEDS(0.99)DEQDPGQWDG s:Phosphorylated S WHAMM 91892.7 1 6 3009.1 63.37 HUMAN 1 -17.9102 -6.7929 IKSKENKSPAIKYRP-p J3QRU1;S16-p IKSKENKSPAIKYRP 0.604013305048409 0.380438239176755 -0.154666666666667 0.085 4.04203513522063 5.57885261690628 -0.154666666666667 0.0850000000000001 0.394272499845805 0.276767275336005 -0.925156171323015 1.20888910914613 J3QRU1 NotFound J3QRU1.S16.p_NotFound J3QRU1_S16s _1_1_16_16 J3QRU1 J3QRU1|P07947 Tyrosine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8191.8191.3 10.32 6.11 99 1 1 1 0 551.9901 1573.9881 S16s TMT10 13 (K) ENKsPAIK (Y) ENKS(1.0)PAIK K:TMT10,s:Phosphorylated S YES1 61899.4 4 1 1289.1 157.77 HUMAN 1 -4.042 5.5789 IKTEETKS_______-p Q9Y520-7;S2898-p IKTEETKS_______ 0.987119537498625 0.288792585310613 -0.00333333333333334 -0.202333333333333 0.113787259130665 7.1160081702457 -0.00333333333333334 -0.202333333333333 0.974139769944964 0.194267066834273 -0.0339426496381907 -1.48088898679487 Q9Y520 PRRC2C Q9Y520.7.S2898.p_PRRC2C Q9Y520-7_S2898s _1_1_2898_2898 Q9Y520-7 Q9Y520-7 Isoform 7 of Protein PRRC2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13167.13167.4 9.75 9.75 9.745 4 1 1 0 681.8973 2644.6055 S2898s TMT10 2883 (R) TGPIKPQAIKTEETKs (-) T(0.0)GPIKPQAIKT(0.0)EET(0.0)KS(0.99) K:TMT10,s:Phosphorylated S PRRC2C 317703.2 1 116 36.3 882.05 HUMAN 1 -0.1138 -7.116 IKTELNSSAESEQPL-p Q9Y5B6;S155-p IKTELNSSAESEQPL 0.366525683885644 0.138433161882489 -0.135 -0.266333333333333 8.09023056033432 11.3120120796308 -0.135 -0.266333333333333 0.155230459828066 0.0739262696440174 -1.65080967062759 -2.20983510555591 Q9Y5B6 PAXBP1 Q9Y5B6.S155.p_PAXBP1 Q9Y5B6_S154sS155s_2_2_154_155 Q9Y5B6 Q9Y5B6|Q9Y5B6-2|Q9Y5B6-4|Q9Y5B6-3 PAX3- and PAX7-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18871.18871.3 12.37 12.37 1.156 4 2 2 0 912.7958 2576.4386 S154s S155s TMT10 148 (K) IKTELNssAESEQPLDK (T) IKT(0.0)ELNS(0.99)S(0.99)AES(0.0)EQPLDK K:TMT10,s:Phosphorylated S PAXBP1 105258.2 2 9 978.1 192.69 HUMAN 1 -8.0902 -11.312 IKTGFSVSVEKSTSS-p E7ETA6;S1231-p IKTGFSVSVEKSTSS 0.285681922962152 0.00407646439511626 -0.178666666666667 -0.61 10.2667577032381 35.1970227160808 -0.178666666666667 -0.61 0.0940425138379487 0.000302202274288274 -2.02809588448268 -8.16702810647423 E7ETA6 PCM1 E7ETA6.S1231.p_PCM1 E7ETA6_S1231s _1_1_1231_1231 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17791.17791.3 10.48 8.92 3.366 3 1 1 0 497.9333 1411.8197 S1231s TMT10 1226 (K) TGFSVsVEK (S) T(0.0)GFS(0.0)VS(0.99)VEK K:TMT10,s:Phosphorylated S PCM1 229381.8 2 34 13.1 1159.95 HUMAN 1 -10.2668 -35.197 IKTGGRVYGTTGTKV-p Q6UN15;Y129-p IKTGGRVYGTTGTKV 0.233628206047255 0.350792780405507 0.867 0.305666666666667 12.1117339988275 6.03171758069594 0.867 0.305666666666667 0.0614931301307047 0.249360834079923 2.35216886808172 1.28990347939816 Q6UN15 FIP1L1 Q6UN15.Y129.p_FIP1L1 Q6UN15_Y129y _1_1_129_129 Q6UN15 A0A0B4J203|Q6UN15|Q6UN15-5|Q6UN15-3|Q6UN15-4 Pre-mRNA 3'-end-processing factor FIP1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.5103.5103.2 13.27 13.27 9.218 4 1 1 0 568.2842 1055.5934 Y129y Hydrogen 128 (R) VyGTTGTK (V) VY(0.99)GT(0.0)T(0.0)GT(0.0)K K:TMT10-Lys-Only,y:Phosphorylated Y FIP1L1 66639.3 1 1 263.1 13.27 HUMAN 1 12.1117 6.0317 IKTKGMDSEDDLRDE-p Q5T2D3;S224-p IKTKGMDSEDDLRDE 0.477403778940958 0.990144326100283 -0.118 0.0016666666666667 5.91011462132834 0.0653793093376037 -0.118 0.00166666666666671 0.256441635417311 0.985058604813747 -1.26853467237496 0.0196064548513136 Q5T2D3 OTUD3 Q5T2D3.S224.p_OTUD3 Q5T2D3_S224s _1_1_224_224 Q5T2D3 Q5T2D3 OTU domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21561.21561.3 16.22 12.99 99 1 1 1 0 863.7334 2509.2128 S224s TMT10 221 (K) GMDsEDDLRDEVEDAVQK (V) GMDS(1.0)EDDLRDEVEDAVQK K:TMT10,s:Phosphorylated S OTUD3 45408.6 5 2 3435.1 51.19 HUMAN 1 -5.9101 0.0654 IKTLPIRSPKVSNVK-p Q5UIP0;S2348-p IKTLPIRSPKVSNVK 0.399908485396236 0.00165562076525894 -0.147 -1.338 7.34603218969931 44.1862761438834 -0.147 -1.338 0.184245453990809 3.81392708239314e-05 -1.52145864367488 -12.1846081089165 Q5UIP0 RIF1 Q5UIP0.S2348.p_RIF1 Q5UIP0_S2348s _1_1_2348_2348 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12131.12131.3 8.68 8.68 1.62 2 1 1 0 483.9582 1369.8931 S2348s TMT10 2343 (K) TLPIRsPK (V) T(0.0)LPIRS(0.99)PK K:TMT10,s:Phosphorylated S RIF1 276628.8 3 37 29.1 922.06 HUMAN 1 -7.346 -44.1863 IKTPERLSLEGERQP-p P35658-3;S421-p IKTPERLSLEGERQP 0.623263761382823 0.00722757897622176 -0.093 0.800333333333333 3.81482637632215 30.6355841591298 -0.093 0.800333333333333 0.415448659853173 0.000863856457601602 -0.881563799253466 6.61707443333905 P35658 NUP214 P35658.3.S421.p_NUP214 P35658-3_S421s _1_1_421_421 P35658-3 P35658-5|P35658-3|P35658-4|P35658-2 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9585.9585.4 9.06 9.06 3.593 2 1 1 0 545.2977 2098.2021 S421s TMT10 416 (K) TPERLsLEGERQPK (S) T(0.0)PERLS(0.99)LEGERQPK K:TMT10,s:Phosphorylated S NUP214 214428.5 4 2 111.1 572.27 HUMAN 1 -3.8148 30.6356 IKYEELQSLAGKHGD-p P05787;S291-p IKYEELQSLAGKHGD 0.82619699417303 0.00908185446134586 -0.0603333333333333 0.718666666666667 1.59948836354437 28.8891618065789 -0.0603333333333333 0.718666666666667 0.691912479391079 0.00129146850449119 -0.418158340236529 6.09195175584435 P05787 KRT8 P05787.S291.p_KRT8 P05787_S291s _1_1_291_291 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28074.28074.4 23.27 23.27 9.893 4 1 1 0 764.6478 2975.6003 S291s TMT10 276 (R) AEAESMYQIKYEELQsLAGK (H) AEAES(0.0)MY(0.0)QIKY(0.0)EELQS(0.99)LAGK K:TMT10,s:Phosphorylated S KRT8 53703.3 5 23 69.1 672.47 HUMAN 1 -1.5995 28.8892 IKYFEGVSPKSLKHS-p P78527;S687-p IKYFEGVSPKSLKHS 0.552196582768395 0.198284370632054 -0.115 0.138333333333333 4.75952617379441 9.24662696529643 -0.115 0.138333333333333 0.334231503534831 0.118942565994857 -1.05979991792429 1.85037823530793 P78527 PRKDC P78527.S687.p_PRKDC P78527_S687s _1_1_687_687 P78527 P78527|P78527-2 DNA-dependent protein kinase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18069.18069.2 12 6.23 8.778 2 1 1 0 732.8802 1384.7877 S687s TMT10 682 (K) YFEGVsPK (S) Y(0.0)FEGVS(0.99)PK K:TMT10,s:Phosphorylated S PRKDC 474044.1 2 1 362.1 342.68 HUMAN 1 -4.7595 9.2466 IKYRPENTPEPVSTS-p J3QRU1;T26-p IKYRPENTPEPVSTS 0.176810885456226 0.449624904185327 0.215333333333333 -0.074 14.9230285889478 4.62690032851171 0.215333333333333 -0.074 0.0321882333501576 0.344595789898746 2.86402754770072 -1.03502314487823 J3QRU1 NotFound J3QRU1.T26.p_NotFound J3QRU1_T26t _1_1_26_26 J3QRU1 J3QRU1|P07947 Tyrosine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13725.13725.4 15.47 9.37 1.142 13 1 1 0 1015.234 3977.9591 T26t TMT10 21 (K) YRPENtPEPVSTSVSHYGAEPTTVSPCPSSSAK (G) Y(0.0)RPENT(0.99)PEPVS(0.0)T(0.0)S(0.0)VS(0.0)HY(0.0)GAEPT(0.0)T(0.0)VS(0.0)PCPS(0.0)S(0.0)S(0.0)AK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T YES1 61899.4 1 2 1289.1 157.77 HUMAN 1 14.923 -4.6269 ILAGHENSY______-p Q8IVH8;S893-p ILAGHENSY______ 0.486043064859747 0.0368272776577164 0.0936666666666667 0.432 5.77340507558088 19.2858326989192 0.0936666666666667 0.432 0.264642440220155 0.0117873649534103 1.24409041489972 3.72400399163574 Q8IVH8 MAP4K3 Q8IVH8.S893.p_MAP4K3 Q8IVH8_S893s _1_1_893_893 Q8IVH8 Q8IVH8|Q8IVH8-2|Q8IVH8-3|F5H5A3 Mitogen-activated protein kinase kinase kinase kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25491.25491.4 13.67 13.67 1.145 7 1 1 0 846.4205 3302.6855 S893s TMT10 867 (R) VVVLESRPTDNPTANSNLYILAGHENsY (-) VVVLES(0.0)RPT(0.0)DNPT(0.0)ANS(0.0)NLY(0.0)ILAGHENS(0.99)Y(0.0) s:Phosphorylated S MAP4K3 102512.2 2 2 3600.1 47.43 HUMAN 1 5.7734 19.2858 ILAGLGFTPKMQQQP-p Q9NUQ8;T317-p ILAGLGFTPKMQQQP 0.863722288203399 0.416338183420862 -0.0543333333333333 -0.084 1.23999451232004 5.06210012036649 -0.0543333333333333 -0.084 0.751623843758226 0.311738174543599 -0.333040466740546 -1.11519842566114 Q9NUQ8 ABCF3 Q9NUQ8.T317.p_ABCF3 Q9NUQ8_T317t _1_1_317_317 Q9NUQ8 Q9NUQ8|Q9NUQ8-2 ATP-binding cassette sub-family F member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32665.32665.3 17.64 17.64 13.423 2 1 1 0 604.6872 1732.0773 T317t TMT10 307 (R) ASVILAGLGFtPK (M) AS(0.0)VILAGLGFT(0.99)PK K:TMT10,t:Phosphorylated T ABCF3 80142.6 1 5 2013.1 102.38 HUMAN 1 -1.24 -5.0621 ILAKPSSSPDPRYLS-p Q9BTC0;S1019-p ILAKPSSSPDPRYLS 0.885540759186227 0.0335720126961239 0.027 0.290333333333333 1.04183480507766 19.8681966784413 0.027 0.290333333333333 0.786713349227111 0.0103081405664822 0.284339576416365 3.84715119151352 Q9BTC0 DIDO1 Q9BTC0.S1019.p_DIDO1 Q9BTC0_S1019s _1_1_1019_1019 Q9BTC0 Q9BTC0|Q9BTC0-1 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13021.13021.3 15.07 8.94 1.291 4 1 1 0 631.6808 1813.0584 S1019s TMT10 1011 (K) SILAKPSSsPDPR (Y) S(0.0)ILAKPS(0.0)S(0.0)S(0.99)PDPR K:TMT10,s:Phosphorylated S DIDO1 245579.9 4 11 153.1 505.54 HUMAN 1 1.0418 19.8682 ILARIKRTGDGNYKS-p O00767;T351-p ILARIKRTGDGNYKS 0.290027496028783 0.000952253650599092 -0.239 -2.10866666666667 10.1338722173663 60.6787110992612 -0.239 -2.10866666666667 0.0969645035533194 8.55320517554167e-07 -2.00497853777428 -24.8359836947683 O00767 SCD O00767.T351.p_SCD O00767_T351t _1_1_351_351 O00767 O00767 Acyl-CoA desaturase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6795.6795.4 9.85 9.85 9.848 2 1 1 0 480.5235 1839.1055 T351t TMT10 348 (R) IKRtGDGNYK (S) IKRT(0.99)GDGNY(0.0)K K:TMT10,t:Phosphorylated T SCD 41693 1 2 3899.1 41.06 HUMAN 1 -10.1339 -60.6787 ILASFGLSARDLDEL-p A8MXP9;S118-p ILASFGLSARDLDEL 0.200797395490016 0.142505253157202 0.232333333333333 0.21 13.5554980390299 11.1497025867746 0.232333333333333 0.21 0.0441011785993319 0.0767414041553902 2.61166306096478 2.18135803114918 A8MXP9 NotFound A8MXP9.S118.p_NotFound A8MXP9_S118s _1_1_118_118 A8MXP9 P43243|D6REM6|A8MXP9 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28335.28335.3 15.32 15.32 1.145 3 1 1 0 624.955 1792.8824 S118s Hydrogen 103 (R) GDADQASNILASFGLsAR (D) GDADQAS(0.0)NILAS(0.0)FGLS(0.99)AR s:Phosphorylated S MATR3 100478.9 3 8 92.1 615.57 HUMAN 1 13.5555 11.1497 ILATRKQSVEDILKD-p P36871;S408-p ILATRKQSVEDILKD 0.27510063265493 0.0166203788862788 -0.295666666666667 0.398 10.6099933475099 24.5706147273183 -0.295666666666667 0.398 0.086896176035435 0.00349090899492485 -2.08791567009125 4.92982655215015 P36871 PGM1 P36871.S408.p_PGM1 P36871_S408s _1_1_408_408 P36871 P36871-2|P36871-3 Phosphoglucomutase-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18111.18111.3 11.06 3.72 99 1 1 1 0 609.6913 1747.0932 S408s TMT10 406 (R) KQsVEDILK (D) KQS(1.0)VEDILK K:TMT10,s:Phosphorylated S PGM1 61733.3 1 5 2909.1 66.18 HUMAN 1 -10.61 24.5706 ILCKLFGSFSLEALK-p Q86UW6;S1101-p ILCKLFGSFSLEALK 0.0722495595033206 0.074615957147091 -0.788333333333333 -0.263 24.547565503968 14.9624007465889 -0.788333333333333 -0.263 0.00350948547744053 0.0318977408499535 -4.93009416056538 -2.86953563485304 Q86UW6 N4BP2 Q86UW6.S1101.p_N4BP2 Q86UW6_S1101s _1_1_1101_1101 Q86UW6 Q86UW6|Q86UW6-2 NEDD4-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.36327.36327.2 12.1 8.75 2.204 2 1 1 0 875.4831 1669.9929 S1101s TMT10 1098 (K) LFGsFSLEALK (D) LFGS(0.99)FS(0.0)LEALK K:TMT10,s:Phosphorylated S N4BP2 200566.4 2 7 1216.1 165.62 HUMAN 1 -24.5476 -14.9624 ILCKSPQSDPADTPT-p P46013;S1864-p ILCKSPQSDPADTPT 0.153650540414552 0.00162286863808758 -0.255 -0.962333333333333 16.3477731874691 44.6067125805339 -0.255 -0.962333333333333 0.0231858318145254 3.46201337953234e-05 -3.13525441216233 -12.4109601213282 P46013 MKI67 P46013.S1864.p_MKI67 P46013_S1864s _1_1_1864_1864 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15589.15589.3 13.93 13.93 1.145 5 1 1 0 914.1457 2660.4532 S1864s TMT10 1857 (K) ILCKSPQsDPADTPTNTK (Q) ILCKS(0.0)PQS(0.99)DPADT(0.0)PT(0.0)NT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MKI67 360912.4 1 61 5.1 1918.46 HUMAN 1 -16.3478 -44.6067 ILDCCPGSPVAKAAS-p Q86YV5;S263-p ILDCCPGSPVAKAAS 0.365639835317266 0.446676813823127 -0.167666666666667 -0.0986666666666666 8.10963003737656 4.66373152739821 -0.167666666666667 -0.0986666666666667 0.15453860808005 0.341685734524237 -1.65417330470398 -1.04185960886507 Q86YV5 SGK223 Q86YV5.S263.p_SGK223 Q86YV5_S263s _1_1_263_263 Q86YV5 Q86YV5 Tyrosine-protein kinase PRAG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20201.20201.3 22.05 22.05 3.126 6 1 1 0 1109.8082 3247.4416 S263s TMT10 242 (R) CSPSGDSEGGEYCSILDCCPGsPVAK (A) CS(0.0)PS(0.0)GDS(0.0)EGGEY(0.0)CS(0.0)ILDCCPGS(0.99)PVAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRAG1 152359.5 3 2 223.1 426.19 HUMAN 1 -8.1096 -4.6637 ILDCIGGSYWEKNVN-p Q53FA7;S220-p ILDCIGGSYWEKNVN 0.892378148996288 0.0415969549186086 0.02 0.281666666666667 0.967735609244734 18.5110310942425 0.02 0.281666666666667 0.800251393517768 0.0140895424729517 0.26576554799593 3.56341440783874 Q53FA7 TP53I3 Q53FA7.S220.p_TP53I3 Q53FA7_S220s _1_1_220_220 Q53FA7 Q53FA7 Quinone oxidoreductase PIG3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.34486.34486.3 18.47 18.36 4.853 2 1 1 0 830.7565 2410.2841 S220s TMT10 207 (K) GAGVNLILDCIGGsYWEK (N) GAGVNLILDCIGGS(0.99)Y(0.0)WEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TP53I3 35706.7 1 3 2518.1 80.27 HUMAN 1 0.9677 18.511 ILDEDSWSDGEQEPI-p F8VX10;S332-p ILDEDSWSDGEQEPI 0.973739315182628 0.0532987808018957 -0.00566666666666667 0.265333333333333 0.226676105600781 16.982344937511 -0.00566666666666668 0.265333333333333 0.949144617932468 0.0200339002123568 -0.0667934479645881 3.25667996085915 F8VX10 NotFound F8VX10.S332.p_NotFound F8VX10_S332s _1_1_332_332 F8VX10 F8VX10|Q9H9L4|F8VXI8 KAT8 regulatory NSL complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28691.28691.3 10.76 10.76 1.298 4 1 1 0 976.7766 2848.3475 S332s TMT10 325 (R) ILDEDSWsDGEQEPITVDQTWR (G) ILDEDS(0.0)WS(0.99)DGEQEPIT(0.0)VDQT(0.0)WR s:Phosphorylated S KANSL2 76505.4 1 2 5145.1 22.43 HUMAN 1 -0.2267 16.9823 ILDKMSES_______-p Q9Y587;S144-p ILDKMSES_______ 0.77431577737001 0.754590220335706 0.062 -0.0463333333333333 2.1259662655786 1.69033463501961 0.062 -0.0463333333333333 0.612919408004891 0.677589295608787 0.536520925768399 -0.43902913720463 Q9Y587 AP4S1 Q9Y587.S144.p_AP4S1 Q9Y587_S144s _1_1_144_144 Q9Y587 Q9Y587 AP-4 complex subunit sigma-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.37530.37530.3 16.3 16.3 2.16 2 1 1 0 694.3965 2001.207 S144s TMT10 131 (R) ILAPLLILDKMSEs (-) ILAPLLILDKMS(0.0)ES(0.99) K:TMT10,s:Phosphorylated S AP4S1 17175.6 2 1 5786.1 16.3 HUMAN 1 2.126 -1.6903 ILDLISESPIKGRAQ-p P61978-2;S216-p ILDLISESPIKGRAQ 0.283719734356722 0.458570905318363 0.171333333333333 0.0746666666666667 10.3341628342888 4.51406909046089 0.171333333333333 0.0746666666666667 0.0925941856664381 0.353665821189392 2.03983049376121 1.01401626357679 P61978 HNRNPK P61978.2.S216.p_HNRNPK P61978-2_S216s _1_1_216_216 P61978-2 P61978-2|P61978-3 Isoform 2 of Heterogeneous nuclear ribonucleoprotein K HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36446.36446.2 17.27 13.81 1.112 2 1 1 0 940.0509 1799.1294 S216s TMT10 208 (K) IILDLISEsPIK (G) IILDLIS(0.0)ES(0.99)PIK K:TMT10,s:Phosphorylated S HNRNPK 51312.6 11 6 595.1 264.01 HUMAN 1 10.3342 4.5141 ILDQTNVYGSAQRRK-p Q9BUJ2;Y510-p ILDQTNVYGSAQRRK 0.147946322560902 0.103267630455874 0.328666666666667 0.227 16.8398990054996 13.0252573858502 0.328666666666667 0.227 0.0207018949016306 0.0498280924335849 3.231167686905 2.51423649605152 Q9BUJ2 HNRNPUL1 Q9BUJ2.Y510.p_HNRNPUL1 Q9BUJ2_Y510y _1_1_510_510 Q9BUJ2 Q9BUJ2|Q9BUJ2-2|B7Z4B8|A0A0A0MRA5|Q9BUJ2-4|Q9BUJ2-3 Heterogeneous nuclear ribonucleoprotein U-like protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.18605.18605.2 23.1 20.71 2.47 4 1 1 0 1025.9947 1971.0133 Y510y TMT10 501 (R) NYILDQTNVyGSAQR (R) NY(0.0)ILDQT(0.0)NVY(0.99)GS(0.0)AQR y:Phosphorylated Y HNRNPUL1 96307.3 7 1 66.1 35.74 HUMAN 1 16.8399 13.0253 ILDRGPLSLDNTLYQ-p Q96L93-2;S937-p ILDRGPLSLDNTLYQ 0.218544112853148 0.463862641368469 -0.209333333333333 -0.0893333333333333 12.7294672730879 4.44898170469976 -0.209333333333333 -0.0893333333333333 0.0533400320974339 0.35900610135355 -2.46243073520739 -1.0018533836652 Q96L93 KIF16B Q96L93.2.S937.p_KIF16B Q96L93-2_S937s _1_1_937_937 Q96L93-2 Q96L93-2|Q96L93-4|Q96L93-6|A0A1B0GTU3 Isoform 2 of Kinesin-like protein KIF16B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33190.33190.3 12.33 12.33 1.239 3 1 1 0 987.1898 2879.5919 S937s TMT10 927 (R) AFEILDRGPLsLDNTLYQVEK (E) AFEILDRGPLS(0.99)LDNT(0.0)LY(0.0)QVEK K:TMT10,s:Phosphorylated S KIF16B 160684.4 1 9 774.1 227.33 HUMAN 1 -12.7295 -4.449 ILEDDENSVDISMLK-p O75717;S383-p ILEDDENSVDISMLK 0.186064438940775 0.993182823561635 0.276666666666667 -0.000999999999999982 14.3560760549667 0.0414718638497908 0.276666666666667 -0.000999999999999973 0.0366768808576654 0.990496199751593 2.75853233290058 -0.0124705497206535 O75717 WDHD1 O75717.S383.p_WDHD1 O75717_S383s _1_1_383_383 O75717 O75717|O75717-2 WD repeat and HMG-box DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22242.22448.3 22.07 22.07 5.274 3 1 1 0 828.41 2403.2478 S383s TMT10 374 (R) SHILEDDENsVDISMLK (T) S(0.0)HILEDDENS(0.99)VDIS(0.0)MLK K:TMT10,s:Phosphorylated S WDHD1 127448.5 24 5 554.1 273.24 HUMAN 1 14.3561 -0.0415 ILEDINASPEMRQRY-p Q9Y6Q9;S214-p ILEDINASPEMRQRY 0.216321397365098 0.982921900658258 0.195 0.00233333333333334 12.8121540821951 0.10928652011562 0.195 0.00233333333333334 0.05233407973871 0.975149826867211 2.47727255341684 0.0326133611162099 Q9Y6Q9 NCOA3 Q9Y6Q9.S214.p_NCOA3 Q9Y6Q9_S214s _1_1_214_214 Q9Y6Q9 Q9Y6Q9|Q9Y6Q9-5|Q9Y6Q9-3|Q9Y6Q9-2|Q9Y6Q9-4 Nuclear receptor coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20366.20366.3 16.95 10.92 8.603 2 1 1 0 716.3397 2067.0378 S214s TMT10 203 (K) TPHDILEDINAsPEMR (Q) T(0.0)PHDILEDINAS(0.99)PEMR s:Phosphorylated S NCOA3 156203.6 7 2 503.1 290.6 HUMAN 1 12.8122 0.1093 ILEKLAPSEDELTCF-p Q6VMQ6-4;S453-p ILEKLAPSEDELTCF 0.30691553421572 0.0606501493573035 -0.153666666666667 -0.229 9.59320243867534 16.2146213333759 -0.153666666666667 -0.229 0.109819574359877 0.0239077038042523 -1.9111140477219 -3.10727683932532 Q6VMQ6 ATF7IP Q6VMQ6.4.S453.p_ATF7IP Q6VMQ6-4_S453s _1_1_453_453 Q6VMQ6-4 Q6VMQ6-4|Q6VMQ6-5|Q6VMQ6-2 Isoform 3 of Activating transcription factor 7-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23491.23491.3 16.12 16.12 4.772 3 1 1 0 678.9993 1955.0196 S453s TMT10 450 (K) LAPsEDELTCFSK (T) LAPS(0.99)EDELT(0.0)CFS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATF7IP 138346.3 3 6 273.1 392.91 HUMAN 1 -9.5932 -16.2146 ILGETCKSEPVKEES-p Q15424;S227-p ILGETCKSEPVKEES 0.886118944763575 0.014351693945819 0.0213333333333333 0.377 1.0274961849917 25.5572629514437 0.0213333333333333 0.377 0.789315046096331 0.00278146567504595 0.280761405660801 5.17965961071053 Q15424 SAFB Q15424.S227.p_SAFB Q15424_S227s _1_1_227_227 Q15424 Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27465.27465.5 17.05 11.5 1.101 7 1 1 0 1023.9297 5035.6592 S227s TMT10 217 (K) ILDILGETCKsEPVKEESSELEQPFAQDTSSVGPDRK (L) ILDILGET(0.0)CKS(0.99)EPVKEES(0.0)S(0.0)ELEQPFAQDT(0.0)S(0.0)S(0.0)VGPDRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SAFB 103096.3 4 20 83.1 629.62 HUMAN 1 1.0275 25.5573 ILGLAIESQDAGIKT-p O00161;S34-p ILGLAIESQDAGIKT 0.230670023869533 0.816507421468261 -0.181 0.0266666666666667 12.2422533117615 1.23194549508152 -0.181 0.0266666666666667 0.0596725598630756 0.753018161032835 -2.37537871711916 0.331054840615199 O00161 SNAP23 O00161.S34.p_SNAP23 O00161_S34s _1_1_34_34 O00161 O00161|O00161-2|H3BPJ0|H3BNE1 Synaptosomal-associated protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29570.29570.2 14.97 11.88 99 1 1 1 0 983.5568 1886.1363 S34s TMT10 27 (R) ILGLAIEsQDAGIK (T) ILGLAIES(1.0)QDAGIK K:TMT10,s:Phosphorylated S SNAP23 23696 2 3 1061.1 182.1 HUMAN 1 -12.2423 1.2319 ILGTLNKSTSSRSLK-p A0MZ66-3;S459-p ILGTLNKSTSSRSLK 0.53866874325315 0.0173615564197841 0.329666666666667 -1.013 4.96660175962753 24.2716364060917 0.329666666666667 -1.013 0.318669004778214 0.00373969651292928 1.09793411928284 -4.85580687378325 A0MZ66 SHTN1 A0MZ66.3.S459.p_SHTN1 A0MZ66-3_S459s _1_1_459_459 A0MZ66-3 A0MZ66-3 Isoform 3 of Shootin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16515.16515.3 10.64 10.64 1.11 5 1 1 0 624.6839 1792.0693 S459s TMT10 451 (K) GILGTLNKsTSSR (S) GILGT(0.0)LNKS(0.99)T(0.0)S(0.0)S(0.0)R K:TMT10,s:Phosphorylated S SHTN1 74064.4 1 5 838.1 214.92 HUMAN 1 4.9666 -24.2716 ILHCLRTTYKYFALP-p Q5VYS8;T625-p ILHCLRTTYKYFALP 0.295125154480667 0.0579257352109434 -0.173333333333333 -0.255 9.99167642057989 16.4798249897534 -0.173333333333333 -0.255 0.100191841279306 0.0224914523916144 -1.98026439555127 -3.15855721306103 Q5VYS8 ZCCHC6 Q5VYS8.T625.p_ZCCHC6 Q5VYS8_T608tT624tT625t_3_3_608_625 Q5VYS8 Q5VYS8|Q5VYS8-6|Q5VYS8-4 Terminal uridylyltransferase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20467.20467.4 7.67 2.72 1.36 6 3 3 0 888.4268 3308.7888 N604n T608t N610n T624t T625t Hydrogen 603 (K) RnVARtLnSQPVFEYILHCLRttYK (Y) RN(1.0)VART(0.99)LN(1.0)S(0.0)QPVFEY(0.0)ILHCLRT(0.99)T(0.99)Y(0.0)K C:Carbamidomethylation,K:TMT10-Lys-Only,n:Deamidated,t:Phosphorylated T ZCCHC6 173394.2 1 6 2208.1 93.42 HUMAN 1 -9.9917 -16.4798 ILHGLGFTPAMQRKK-p Q9UG63-2;T218-p ILHGLGFTPAMQRKK 0.188305136412999 0.823933222349353 0.225333333333333 -0.0343333333333333 14.228807106246 1.17881846749902 0.225333333333333 -0.0343333333333333 0.0377675914410226 0.762286367855326 2.73502542218184 -0.31811851330508 Q9UG63 ABCF2 Q9UG63.2.T218.p_ABCF2 Q9UG63-2_T218t _1_1_218_218 Q9UG63-2 Q9UG63-2 Isoform 2 of ATP-binding cassette sub-family F member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23618.23618.3 22.62 22.62 99 1 1 1 0 583.9733 1669.9409 T218t TMT10 211 (R) ILHGLGFtPAMQR (K) ILHGLGFT(1.0)PAMQR t:Phosphorylated T ABCF2 73070 2 1 3726.1 44.44 HUMAN 1 14.2288 -1.1788 ILHKRAHTGEKPFEC-p Q5CZA5;T450-p ILHKRAHTGEKPFEC 0.0800410049367024 0.0304698237240543 -0.349 -0.434 23.4266301231924 20.4926219228234 -0.349 -0.434 0.00454293986075491 0.00892766340072478 -4.65601293103932 -3.98163554846044 Q5CZA5 ZNF805 Q5CZA5.T450.p_ZNF805 Q5CZA5_T450t _1_1_450_450 Q5CZA5 O43296|Q5CZA5|Q14592|Q14592-2|Q5CZA5-2 Zinc finger protein 805 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8832.8832.3 10.32 10.32 99 1 1 1 0 691.0285 1991.0987 T450t TMT10 448 (R) AHtGEKPFECK (E) AHT(1.0)GEKPFECK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ZNF805 73138.9 1 73 240.31 415.72 HUMAN 1 -23.4266 -20.4926 ILHQRIHSGEKPYGC-p P17028;S274-p ILHQRIHSGEKPYGC 0.444228577919561 0.00604775327324358 -0.105666666666667 -0.555666666666667 6.49537493673702 32.0248481903132 -0.105666666666667 -0.555666666666667 0.224110655738048 0.000627357625182779 -1.37235871034338 -7.06044301926768 P17028 ZNF24 P17028.S274.p_ZNF24 P17028_S274s _1_1_274_274 P17028 P17028 Zinc finger protein 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10671.10671.3 14.75 12.04 8.055 2 1 1 0 830.082 2408.2669 S274s TMT10 272 (R) IHsGEKPYGCVECGK (A) IHS(0.99)GEKPY(0.0)GCVECGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF24 42782.2 2 6 2565.1 78.32 HUMAN 1 -6.4954 -32.0248 ILHVINASDDEWWQA-p Q12959-2;S619-p ILHVINASDDEWWQA 0.885069082704287 0.0507364932136902 -0.0213333333333333 0.234666666666667 1.04782272416442 17.2950373407993 -0.0213333333333334 0.234666666666667 0.785629400424814 0.0186421614958455 -0.285831607033281 3.31838908905795 Q12959 DLG1 Q12959.2.S619.p_DLG1 Q12959-2_S619s _1_1_619_619 Q12959-2 Q12959-2|Q12959-7|Q12959-4|A0A0C4DFT3|Q12959-6|Q12959-3|Q12959-5|Q12959-9|Q12959-8|E7EQD7 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34610.34610.3 20.22 16.51 99 1 1 1 0 861.0745 2501.2411 S619s TMT10 609 (K) FGDILHVINAsDDEWWQAR (Q) FGDILHVINAS(1.0)DDEWWQAR s:Phosphorylated S DLG1 103604.4 3 19 196.1 460.79 HUMAN 1 -1.0478 17.295 ILIERIQSIKEEKED-p Q13459;S1972-p ILIERIQSIKEEKED 0.0706407208748292 0.191453894901761 -0.647666666666667 0.187 24.8484960200345 9.44338830195159 -0.647666666666667 0.187 0.00327454073962049 0.113674007181465 -5.005507534001 1.88443310314126 Q13459 MYO9B Q13459.S1972.p_MYO9B Q13459_S1972s _1_1_1972_1972 Q13459 Q13459|M0R0P8|Q13459-2 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13859.13859.2 9.57 9.57 99 1 1 1 0 871.5076 1662.0405 S1972s TMT10 1970 (R) IQsIKEEK (E) IQS(1.0)IKEEK K:TMT10,s:Phosphorylated S MYO9B 244993.9 2 19 211.1 438.12 HUMAN 1 -24.8485 9.4434 ILIKKNGSCCIADLG-p P36894;S375-p ILIKKNGSCCIADLG 0.390513422575628 0.0213404996074559 -0.124 -0.322 7.54736606296064 22.8453172876187 -0.124 -0.322 0.175899009412158 0.00519359728647456 -1.55652670728074 -4.51294492557702 P36894 BMPR1A P36894.S375.p_BMPR1A P36894_S375s _1_1_375_375 P36894 P36894 Bone morphogenetic protein receptor type-1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25012.25012.3 11.78 9.58 99 1 1 1 0 672.6743 1936.0396 S375s TMT10 373 (K) NGsCCIADLGLAVK (F) NGS(1.0)CCIADLGLAVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BMPR1A 61508.7 1 1 6426.1 11.78 HUMAN 1 -7.5474 -22.8453 ILKPFGNSISRYNGE-p Q14739;S128-p ILKPFGNSISRYNGE 0.732783197794934 0.0310908781831712 -0.106333333333333 -0.409 2.55473399783534 20.3645446481037 -0.106333333333333 -0.409 0.555298627709075 0.00919486876706739 -0.628426099139227 -3.95383987243808 Q14739 LBR Q14739.S128.p_LBR Q14739_S128s _1_1_128_128 Q14739 Q14739 Lamin-B receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29468.29468.3 16.22 16.22 2.331 3 1 1 0 732.0975 2114.3102 S128s TMT10 117 (K) LTPLILKPFGNsISR (Y) LT(0.0)PLILKPFGNS(0.99)IS(0.0)R K:TMT10,s:Phosphorylated S LBR 71101.3 1 7 1716.1 119.76 HUMAN 1 -2.5547 -20.3645 ILKQEPQSPSRSLEP-p Q8WUQ7-2;S489-p ILKQEPQSPSRSLEP 0.192059131883792 0.423623196625808 0.223666666666667 -0.0873333333333333 13.9930732812337 4.96605582311432 0.223666666666667 -0.0873333333333333 0.0398742632612704 0.318709066070221 2.69164681659894 -1.09761339206411 Q8WUQ7 CACTIN Q8WUQ7.2.S489.p_CACTIN Q8WUQ7-2_S489s _1_1_489_489 Q8WUQ7-2 Q8WUQ7-2 Isoform 2 of Cactin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23549.23549.4 20.95 14.65 1.404 3 1 1 0 908.7493 3552.004 S489s TMT10 468 (K) LKQEQGVESEPLFPILKQEPQsPSR (S) LKQEQGVES(0.0)EPLFPILKQEPQS(0.99)PS(0.0)R K:TMT10,s:Phosphorylated S CACTIN 108392.3 6 2 2920.1 65.94 HUMAN 1 13.9931 -4.9661 ILKVNGASLKGLSQQ-p Q12923-4;S1566-p ILKVNGASLKGLSQQ 0.111154875717767 0.0253786999414675 -0.298666666666667 -0.327 19.9283370981131 21.7130952655712 -0.298666666666667 -0.327 0.0101663788626686 0.00674047455268407 -3.86358759082033 -4.25220692093345 Q12923 PTPN13 Q12923.4.S1566.p_PTPN13 Q12923-4_S1566s _1_1_1566_1566 Q12923-4 Q12923-4 Isoform 4 of Tyrosine-protein phosphatase non-receptor type 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11919.11919.2 8.22 8.22 99 1 1 1 0 613.8486 1146.7247 S1566s TMT10 1562 (K) VNGAsLK (G) VNGAS(1.0)LK K:TMT10,s:Phosphorylated S PTPN13 279614.3 1 11 518.1 284.65 HUMAN 1 -19.9283 -21.7131 ILLGRLGSDPQKKTV-p Q96KP4;S87-p ILLGRLGSDPQKKTV 0.270113006414649 0.187442287541933 0.182333333333333 0.131666666666667 10.7726306474933 9.56375693247765 0.182333333333333 0.131666666666667 0.0837022119994129 0.110566689567579 2.11632209655496 1.90527638753335 Q96KP4 CNDP2 Q96KP4.S87.p_CNDP2 Q96KP4_S87s _1_1_87_87 Q96KP4 Q96KP4|A0A087WYZ1 Cytosolic non-specific dipeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9125.9125.3 8.15 1.02 99 1 1 1 0 547.3182 1559.9724 S87s TMT10 85 (R) LGsDPQKK (T) LGS(1.0)DPQKK K:TMT10,s:Phosphorylated S CNDP2 53219.8 1 2 3897.1 41.11 HUMAN 1 10.7726 9.5638 ILLGSGDSEVTEPDH-p Q8N680;S491-p ILLGSGDSEVTEPDH 0.825157658635187 0.0192035253059585 -0.0333333333333333 0.322666666666667 1.60802107718378 23.5944681198402 -0.0333333333333333 0.322666666666667 0.690554392812339 0.00437072203996367 -0.420132684758064 4.69095170640548 Q8N680 ZBTB2 Q8N680.S491.p_ZBTB2 Q8N680_S488sS491s_2_2_488_491 Q8N680 Q8N680 Zinc finger and BTB domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26589.26589.4 13.08 13.08 1.157 5 2 2 0 835.6935 3179.8131 S488s S491s TMT10 483 (R) SILLGsGDsEVTEPDHPVLASIKK (E) S(0.0)ILLGS(0.99)GDS(0.99)EVT(0.0)EPDHPVLAS(0.0)IKK K:TMT10,s:Phosphorylated S ZBTB2 58248.7 1 5 2616.1 76.7 HUMAN 1 -1.608 23.5945 ILLRLSDSPSMKKES-p F6VRR5;S385-p ILLRLSDSPSMKKES 0.130013664511896 0.00363879152855353 -0.279 -0.768666666666667 18.3223201198113 36.2249796432827 -0.279 -0.768666666666667 0.0147152616291759 0.000238507497501844 -3.52779287656333 -8.5562940738965 F6VRR5 POLDIP3 F6VRR5.S385.p_POLDIP3 F6VRR5_S385s _1_1_385_385 F6VRR5 F6VRR5|Q9BY77|Q9BY77-2 Polymerase delta-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12152.12152.3 11.57 5.88 1.119 3 1 1 0 587.3256 1679.9969 S385s TMT10 382 (R) LSDsPSMKK (E) LS(0.0)DS(0.99)PS(0.0)MKK K:TMT10,s:Phosphorylated S POLDIP3 48388.1 5 4 2378.1 85.97 HUMAN 1 -18.3223 -36.225 ILPKEHGSQFFYLPI-p A0A1B0GUA8;S1249-p ILPKEHGSQFFYLPI 0.442431320573341 0.0222155712242141 0.105 0.313333333333333 6.52481830219806 22.5817663388277 0.10664617731725 0.313333333333333 0.222596417154305 0.00551852947011254 1.37755094741087 4.45137901234894 A0A1B0GUA8 NotFound A0A1B0GUA8.S1249.p_NotFound A0A1B0GUA8_S1249s _1_1_1249_1249 A0A1B0GUA8 A0A1B0GUA8|Q9H1H9|Q9H1H9-2|Q9H1H9-4 Kinesin-like protein KIF13A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30116.30116.3 17.72 13.9 8.151 2 1 1 0 706.3824 2037.1574 S1249s TMT10 1246 (K) EHGsQFFYLPIIK (H) EHGS(0.99)QFFY(0.0)LPIIK K:TMT10,s:Phosphorylated S KIF13A 208874.1 1 5 1079.1 180.11 HUMAN 1 6.5248 22.5818 ILPNPCHTPKKNSIH-p F5H527;T806-p ILPNPCHTPKKNSIH 0.961539577628342 0.0188292921443059 0.00733333333333333 -0.343666666666667 0.327280550408123 23.7374928560042 0.00733333333333333 -0.343666666666667 0.927410364091517 0.00422912687597566 0.0954265387695649 -4.72545279434922 F5H527 SSH2 F5H527.T806.p_SSH2 F5H527_T806t _1_1_806_806 F5H527 F5H527|Q76I76 Protein phosphatase Slingshot homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14537.14537.3 8.06 8.06 99 1 1 1 0 629.6591 1806.9937 T806t TMT10 797 (K) GDILPNPCHtPK (K) GDILPNPCHT(1.0)PK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T SSH2 162969.8 1 4 998.1 190.13 HUMAN 1 0.3273 -23.7375 ILPQGHESPIFKQFF-p P40121;S337-p ILPQGHESPIFKQFF 0.717657533496988 0.0319456705045631 0.049 0.305 2.71849833562605 20.1941362918655 0.049 0.305 0.534749228209494 0.00956282857960476 0.662632272947495 3.91702770257682 P40121 CAPG P40121.S337.p_CAPG P40121_S337s _1_1_337_337 P40121 P40121|P40121-2 Macrophage-capping protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24666.24666.3 21.51 21.51 8.957 3 1 1 0 1022.5243 2985.5908 S337s TMT10 320 (R) MQYAPNTQVEILPQGHEsPIFK (Q) MQY(0.0)APNT(0.0)QVEILPQGHES(0.99)PIFK K:TMT10,s:Phosphorylated S CAPG 38783.1 8 3 3455.1 50.51 HUMAN 1 2.7185 20.1941 ILPRRPPTPEAQSEE-p Q9BTK6;T138-p ILPRRPPTPEAQSEE 0.476702687437192 0.76915098289621 -0.338 0.201 5.92390486513221 1.57524492679524 -0.338 0.201 0.255628642351993 0.695785713729864 -1.27099599385558 0.412493368484905 Q9BTK6 PAGR1 Q9BTK6.T138.p_PAGR1 Q9BTK6_T138tS143sS148s_3_3_138_148 Q9BTK6 Q9BTK6 PAXIP1-associated glutamate-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8712.8712.4 7.9 3.87 99 3 3 3 0 778.0873 2869.4216 T138t S143s S148s TMT10 135 (R) RPPtPEAQsEEERsDEEPEAK (E) RPPT(1.0)PEAQS(1.0)EEERS(1.0)DEEPEAK K:TMT10,t:Phosphorylated T,s:Phosphorylated S PAGR1 27829.6 2 3 2728.1 72.58 HUMAN 1 -5.9239 1.5752 ILQLTVQYRMHPDIC-p Q7Z333-4;Y2258-p ILQLTVQYRMHPDIC 0.672055923167882 0.279482640255134 0.0873333333333333 0.264333333333333 3.23229993125068 7.29464629867795 0.0873333333333333 0.264333333333333 0.475083565155151 0.186438401261033 0.767212708479124 1.51206175721251 Q7Z333 SETX Q7Z333.4.Y2258.p_SETX Q7Z333-4_T2255tY2258y_2_2_2255_2258 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23246.23246.3 7.88 5.29 99 2 2 2 0 501.9155 1343.8045 T2255t Y2258y Hydrogen 2249 (R) LPILQLtVQyR (M) LPILQLT(1.0)VQY(1.0)R t:Phosphorylated T,y:Phosphorylated Y SETX 310728.6 3 22 192.1 463.82 HUMAN 1 3.2323 7.2946 ILQNRVDSLEFSLES-p P49454;S834-p ILQNRVDSLEFSLES 0.864679832642579 0.0128170050245003 0.0246666666666667 -0.517 1.22949055082722 26.3646124649496 0.0246666666666667 -0.517 0.753443941296924 0.00230961054376321 0.330492795632231 -5.39069102785891 P49454 CENPF P49454.S834.p_CENPF P49454_S834s _1_1_834_834 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24969.24969.3 17.33 15.73 2.361 4 1 1 0 939.4968 2736.4932 S834s TMT10 824 (K) NSAILQNRVDsLEFSLESQK (Q) NS(0.0)AILQNRVDS(0.99)LEFS(0.0)LES(0.0)QK K:TMT10,s:Phosphorylated S CENPF 371067.2 3 8 47.1 771.73 HUMAN 1 1.2295 -26.3646 ILQTSGVSEFTKKRS-p Q99459;S286-p ILQTSGVSEFTKKRS 0.514530931412314 0.247806143409771 0.127333333333333 -0.120666666666667 5.32816390912806 7.98257702500991 0.127333333333333 -0.120666666666667 0.293213261721523 0.159126421940687 1.1638702768094 -1.63162205903787 Q99459 CDC5L Q99459.S286.p_CDC5L Q99459_S286s _1_1_286_286 Q99459 Q99459 Cell division cycle 5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30038.30038.3 9.86 10.44 1.186 6 1 1 0 849.7712 2467.3332 S286s TMT10 272 (K) ESDLPSAILQTSGVsEFTK (K) ES(0.0)DLPS(0.0)AILQT(0.0)S(0.0)GVS(0.99)EFT(0.0)K K:TMT10,s:Phosphorylated S CDC5L 92477.2 1 2 751.1 232.35 HUMAN 1 5.3282 -7.9826 ILRERICSEEERAKA-p F8WAR4;S143-p ILRERICSEEERAKA 0.952809813911717 0.603598489494447 0.0186666666666667 0.0883333333333333 0.413836190783117 2.97418542196906 0.0186666666666667 0.0883333333333334 0.909109886943958 0.504175175106873 0.119606754193613 0.715064305713493 F8WAR4 NotFound F8WAR4.S143.p_NotFound F8WAR4_S143s _1_1_143_143 F8WAR4 F8WAR4|C9JRZ6|Q9NX63 MICOS complex subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4786.4786.3 7.74 7.74 99 1 1 1 0 477.5565 1350.6885 S143s Hydrogen 141 (R) ICsEEERAK (A) ICS(1.0)EEERAK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S CHCHD3 27848.9 1 5 2722.1 72.89 HUMAN 1 0.4138 2.9742 ILRGGPPSPTKTAKM-p Q5TCQ9;S684-p ILRGGPPSPTKTAKM 0.545021211681862 0.0060335811129804 0.083 -0.815333333333333 4.86557225993219 32.0570886100506 0.083 -0.815333333333333 0.326169069008345 0.0006227175979105 1.07936496771406 -7.07101593932835 Q5TCQ9 MAGI3 Q5TCQ9.S684.p_MAGI3 Q5TCQ9_S684s _1_1_684_684 Q5TCQ9 Q5TCQ9|Q5TCQ9-4|Q5TCQ9-2|Q5TCQ9-3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6887.6887.2 11.98 11.98 1.262 2 1 1 0 639.8459 1198.7196 S684s TMT10 680 (R) GGPPsPTK (T) GGPPS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S MAGI3 166517.7 4 3 1019.1 188.04 HUMAN 1 4.8656 -32.0571 ILRHLLNSPTDPFNR-p O95155-4;S1316-p ILRHLLNSPTDPFNR 0.676823734876953 0.980820363902604 -0.0613333333333333 -0.00333333333333334 3.17359175511356 0.12003956617834 -0.0613333333333333 -0.00333333333333334 0.481549376064705 0.972738361653125 -0.755455496677742 -0.0357796965081886 O95155 UBE4B O95155.4.S1316.p_UBE4B O95155-4_S1316s _1_1_1316_1316 O95155-4 O95155-4|O95155-2|O95155-3 Isoform 4 of Ubiquitin conjugation factor E4 B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16794.16794.3 14.56 14.56 2.148 2 1 1 0 573.9522 1639.8754 S1316s TMT10 1312 (R) HLLNsPTDPFNR (Q) HLLNS(0.99)PT(0.0)DPFNR s:Phosphorylated S UBE4B 152984.7 2 9 989.1 191.62 HUMAN 1 -3.1736 -0.12 ILRTSSGSIREKTAC-p Q8NCA5;S286-p ILRTSSGSIREKTAC 0.127638476804876 0.0108865221743385 -0.407333333333333 -0.506333333333333 18.5287548921905 27.505604688879 -0.407333333333333 -0.506333333333333 0.0140321594423469 0.00177598597209235 -3.57007679375094 -5.69960386215251 Q8NCA5 FAM98A Q8NCA5.S286.p_FAM98A Q8NCA5_S286s _1_1_286_286 Q8NCA5 Q8NCA5|Q8NCA5-2|E9PH82 Protein FAM98A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4839.4839.3 7.2 7.2 2.425 4 1 1 0 501.6045 1422.8317 S286s TMT10 282 (R) TSSGsIREK (T) T(0.0)S(0.0)S(0.0)GS(0.99)IREK K:TMT10,s:Phosphorylated S FAM98A 55856.1 3 1 7229.1 7.2 HUMAN 1 -18.5288 -27.5056 ILSADLRSPVYLTVL-p P55786;S745-p ILSADLRSPVYLTVL 0.837853261844575 0.084262722126564 0.051 0.243333333333333 1.48722772840413 14.2232033322415 0.051 0.243333333333333 0.710030863813956 0.0378163550465216 0.391992611101998 2.73232097690292 P55786 NPEPPS P55786.S745.p_NPEPPS P55786_S745s _1_1_745_745 P55786 P55786|E9PLK3|P55786-2 Puromycin-sensitive aminopeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30571.30571.4 18.5 14.65 2.377 4 1 1 0 614.358 2374.4474 S745s TMT10 737 (K) QILSADLRsPVYLTVLK (H) QILS(0.0)ADLRS(0.99)PVY(0.0)LT(0.0)VLK K:TMT10,s:Phosphorylated S NPEPPS 103959 3 5 1607.1 127.86 HUMAN 1 1.4872 14.2232 ILSDESSSDEDEKKN-p P35659;S232-p ILSDESSSDEDEKKN 0.579287608093284 0.885150204505266 0.113333333333333 0.0176666666666667 4.35966561769311 0.744878639876376 0.113333333333333 0.0176666666666667 0.366465789364768 0.842387930967296 0.985285425662424 0.208579973805014 P35659 DEK P35659.S232.p_DEK P35659_S231sS232s_2_2_231_232 P35659 P35659|B4DFG0|P35659-2 Protein DEK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16258.16258.3 7.29 7.29 1.144 5 2 2 0 972.7665 2756.3751 S231s S232s TMT10 220 (R) TKCPEILSDESssDEDEK (K) T(0.0)KCPEILS(0.0)DES(0.0)S(0.99)S(0.99)DEDEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DEK 42958.8 2 8 488.1 294.94 HUMAN 1 4.3597 0.7449 ILSKVEITPESILSA-p Q5VT52;T517-p ILSKVEITPESILSA 0.460235210798605 0.225805630098638 -0.112 -0.127 6.21525895300774 8.51170327098115 -0.112 -0.127 0.239041939962891 0.140873619410241 -1.32282098117832 -1.72324960084854 Q5VT52 RPRD2 Q5VT52.T517.p_RPRD2 Q5VT52_T517t _1_1_517_517 Q5VT52 Q5VT52|Q5VT52-3 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36830.36830.3 15.39 15.39 2.086 4 1 1 0 675.714 1945.1622 T517t TMT10 514 (K) VEItPESILSALSK (T) VEIT(0.99)PES(0.0)ILS(0.0)ALS(0.0)K K:TMT10,t:Phosphorylated T RPRD2 156473.2 1 8 172.1 488.65 HUMAN 1 -6.2153 -8.5117 ILSLRSCSLGSLGAL-p Q15633;S283-p ILSLRSCSLGSLGAL 0.759357936811367 0.150259865061758 0.09 -0.165 2.29036259985872 10.8318718726406 0.09 -0.165 0.590151805335632 0.082568199187459 0.572186200450096 -2.12573852477858 Q15633 TARBP2 Q15633.S283.p_TARBP2 Q15633_S283s _1_1_283_283 Q15633 Q15633|Q15633-2 RISC-loading complex subunit TARBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19865.19865.3 20.63 20.63 1.105 3 1 1 0 658.9649 1894.9135 S283s TMT10 281 (R) SCsLGSLGALGPACCR (V) S(0.0)CS(0.99)LGS(0.0)LGALGPACCR C:Carbamidomethylation,s:Phosphorylated S TARBP2 39666.2 1 5 2078.1 98.8 HUMAN 1 2.2904 -10.8319 ILSPRSESGGLGVSM-p Q8TB72;S87-p ILSPRSESGGLGVSM 0.491590028163208 0.513634248493385 0.128666666666667 0.0773333333333334 5.6772549707876 3.8823056086474 0.128666666666667 0.0773333333333334 0.270566798540061 0.409043446634043 1.22684859630932 0.89441607011573 Q8TB72 PUM2 Q8TB72.S87.p_PUM2 Q8TB72_S87s _1_1_87_87 Q8TB72 Q8TB72|Q8TB72-3|Q8TB72-4|Q8TB72-2|A0A0A0MR59 Pumilio homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.36277.36277.4 20.49 20.49 1.125 8 1 1 0 802.9033 3128.6186 S87s TMT10 85 (R) SEsGGLGVSMVEYVLSSSPADKLDSR (F) S(0.0)ES(0.99)GGLGVS(0.0)MVEY(0.0)VLS(0.0)S(0.0)S(0.0)PADKLDS(0.0)R K:TMT10,s:Phosphorylated S PUM2 114784.2 3 2 944.1 197.75 HUMAN 1 5.6773 3.8823 ILSSRAGTHMLRK__-p Q5HYI7-2;T153-p ILSSRAGTHMLRK__ 0.784610264714199 0.00263377140296369 -0.045 0.762333333333333 2.02895544865184 39.2538161762861 -0.045 0.762333333333334 0.626764593982398 0.000118745834083799 -0.51520492552742 9.80074919956054 Q5HYI7 MTX3 Q5HYI7.2.T153.p_MTX3 Q5HYI7-2_T153t_1_1_153_153 Q5HYI7-2 Q5HYI7-2 Isoform 2 of Metaxin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5944.5944.2 8 3.54 99 1 1 1 0 734.4081 1371.8295 T153t M155m TMT10 151 (R) AGtHmLRK (-) AGT(1.0)HM(1.0)LRK K:TMT10,t:Phosphorylated T,m:Oxidized methionine MTX3 17626.1 1 1 7049.1 8 HUMAN 1 -2.029 39.2538 ILTKALRSYQLGIGR-p Q9NTU4;S167-p ILTKALRSYQLGIGR 0.560135693219576 0.0149209176257738 -0.101 0.456 4.64237360193395 25.2761270271997 -0.101 0.456 0.343370230339589 0.00296747656080438 -1.03809368488474 5.10758605464368 Q9NTU4 TEX40 Q9NTU4.S167.p_TEX40 Q9NTU4_S167sT179t_2_2_167_179 Q9NTU4 Q9NTU4|F5H186 Cation channel sperm-associated protein subunit zeta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14938.14938.3 8.32 2.73 1.547 3 2 2 0 1040.5519 2959.6994 S167s T179t TMT10 164 (K) ALRsYQLGIGRDHFLtKELQR (Y) ALRS(0.99)Y(0.0)QLGIGRDHFLT(0.99)KELQR K:TMT10,s:Phosphorylated S,t:Phosphorylated T CATSPERZ 22895.2 1 1 6988.1 8.32 HUMAN 1 -4.6424 25.2761 ILTRLPESVERLTGV-p O75955;S407-p ILTRLPESVERLTGV 0.69054294283612 0.142439788148949 0.0543333333333333 0.210333333333333 3.01424529052909 11.1537152172916 0.0543333333333333 0.210333333333333 0.499545982906373 0.0766705322701111 0.723304195056612 2.18206142199502 O75955 FLOT1 O75955.S407.p_FLOT1 O75955_S407s _1_1_407_407 O75955 O75955|O75955-2 Flotillin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.33541.33541.3 14.02 14.02 3.614 3 1 1 0 779.0854 2255.2808 S407s TMT10 393 (K) VTGEVLDILTRLPEsVER (L) VT(0.0)GEVLDILT(0.0)RLPES(0.99)VER s:Phosphorylated S FLOT1 47582.7 2 4 2431.1 83.61 HUMAN 1 3.0142 11.1537 ILTSIMGSPNSHPSE-p Q96QC0;S591-p ILTSIMGSPNSHPSE 0.23883739288999 0.0878970961391635 -0.286666666666667 0.334333333333333 11.8957383946826 13.9798210035827 -0.286666666666667 0.334333333333333 0.0646288101682593 0.0399961234002919 -2.31385504900028 2.6876049168236 Q96QC0 PPP1R10 Q96QC0.S591.p_PPP1R10 Q96QC0_S591s_1_1_591_591 Q96QC0 Q96QC0 Serine/threonine-protein phosphatase 1 regulatory subunit 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.35094.35094.5 15.98 15.98 1.173 7 1 1 0 981.3004 4821.4972 N580n S591s TMT10 570 (K) GPQGPGGGGInVQEILTSIMGsPNSHPSEELLKQPDYSDK (I) GPQGPGGGGIN(0.99)VQEILT(0.0)S(0.0)IMGS(0.99)PN(0.0)S(0.0)HPS(0.0)EELLKQPDY(0.0)S(0.0)DK K:TMT10,n:Deamidated,s:Phosphorylated S PPP1R10 99398.3 4 8 592.1 264.27 HUMAN 1 -11.8957 13.9798 ILVPNGFSKLEEPPE-p Q7Z5L9;S163-p ILVPNGFSKLEEPPE 0.307142145800385 0.137773772825258 0.143 0.172333333333333 9.58743228410074 11.3446097608821 0.143 0.172333333333333 0.109965580604907 0.073373464182647 1.9101136721092 2.21556070667809 Q7Z5L9 IRF2BP2 Q7Z5L9.S163.p_IRF2BP2 Q7Z5L9_S163s _1_1_163_163 Q7Z5L9 Q7Z5L9|Q7Z5L9-2 Interferon regulatory factor 2-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28258.28258.5 14.69 12.12 1.589 4 1 1 0 998.7333 4909.6729 S163s TMT10 138 (R) PAASLAQPPTPQPPPVNGILVPNGFsKLEEPPELNRQSPNPR (R) PAAS(0.0)LAQPPT(0.0)PQPPPVNGILVPNGFS(0.99)KLEEPPELNRQS(0.0)PNPR K:TMT10,s:Phosphorylated S IRF2BP2 61765.3 23 3 154.1 504.92 HUMAN 1 9.5874 11.3446 ILVSIGESFGTSEKF-p P06400;S838-p ILVSIGESFGTSEKF 0.505584947622533 0.00250910143342354 -0.102666666666667 -0.845666666666667 5.46790710179487 39.7517952387551 -0.102666666666667 -0.845666666666667 0.28392869728336 0.000105881595301156 -1.18915552907626 -10.0202785958986 P06400 RB1 P06400.S838.p_RB1 P06400_S838s _1_1_838_838 P06400 P06400 Retinoblastoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28831.28831.3 11.94 11.94 3.533 4 1 1 0 669.0281 1925.0996 S838s TMT10 831 (R) ILVSIGEsFGTSEK (F) ILVS(0.0)IGES(0.99)FGT(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S RB1 107013.3 1 12 155.1 502.88 HUMAN 1 -5.4679 -39.7518 IMGDPAQSPESKDST-p Q9UEG4;S52-p IMGDPAQSPESKDST 0.807313814085276 0.0341637378727217 -0.076 0.463 1.78862644489606 19.7572451078413 -0.076 0.463 0.662425977860667 0.0105748810071243 -0.461465797654652 3.82352263448009 Q9UEG4 ZNF629 Q9UEG4.S52.p_ZNF629 Q9UEG4_S28sS52s_2_2_28_52 Q9UEG4 Q9UEG4 Zinc finger protein 629 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18179.18179.4 16.77 12.26 2.214 9 2 2 0 1218.7607 4711.0944 S28s N30n S52s Hydrogen 25 (R) GAEsEnEEESPRQESSGEEIIMGDPAQsPESKDSTEMSLER (S) GAES(0.99)EN(1.0)EEES(0.0)PRQES(0.0)S(0.0)GEEIIMGDPAQS(0.99)PES(0.0)KDS(0.0)T(0.0)EMS(0.0)LER K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated ZNF629 98957.8 1 156 240.4 415.72 HUMAN 1 -1.7886 19.7572 IMHKRTHTGEKPYAC-p P49711;T518-p IMHKRTHTGEKPYAC 0.218645786852014 0.00157273645056424 0.367 -1.04 12.7255869693548 45.0647279235494 0.367 -1.04 0.0533877112702904 3.11549606920212e-05 2.46173474286265 -12.6620458166454 P49711 CTCF P49711.T518.p_CTCF P49711_T518t _1_1_518_518 P49711 P49711|P49711-2 Transcriptional repressor CTCF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.4478.4478.4 14.09 9.03 1.161 4 1 1 0 640.3082 2478.2473 T518t TMT10 516 (R) THtGEKPYACSHCDK (T) T(0.0)HT(0.99)GEKPY(0.0)ACS(0.0)HCDK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T CTCF 84324.5 2 6 1956.1 105.21 HUMAN 1 12.7256 -45.0647 IMKASLLTDEEDVDM-p P52948;T1000-p IMKASLLTDEEDVDM 0.635198086071807 0.0689224838281933 0.0756666666666667 0.242666666666667 3.67401691839297 15.4503208665327 0.0756666666666667 0.242666666666667 0.429139319468286 0.0285080763564199 0.854281135100012 2.96133969263313 P52948 NUP98 P52948.T1000.p_NUP98 P52948_T1000t _1_1_1000_1000 P52948 P52948|P52948-5|P52948-2|P52948-6 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28452.28452.3 16.62 16.62 4.184 2 1 1 0 744.01 2150.0484 T1000t TMT10 996 (K) ASLLtDEEDVDMALDQR (F) AS(0.0)LLT(0.99)DEEDVDMALDQR t:Phosphorylated T NUP98 198716.8 2 16 187.1 472.84 HUMAN 1 3.674 15.4503 IMLVRLNSKWDLRRL-p P50990;S317-p IMLVRLNSKWDLRRL 0.390019845693281 0.0815005720095199 0.124333333333333 -0.274 7.56400107807573 14.4361413072478 0.124333333333333 -0.274 0.17522654269101 0.0360069113343486 1.55942131306897 -2.77162687104992 P50990 CCT8 P50990.S317.p_CCT8 P50990_S317s _1_1_317_317 P50990 P50990|P50990-2|P50990-3 T-complex protein 1 subunit theta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14059.14059.4 9.5 5.1 99 1 1 1 0 432.2446 1645.9902 S317s TMT10 315 (R) LNsKWDLRR (L) LNS(1.0)KWDLRR K:TMT10,s:Phosphorylated S CCT8 60190.1 3 6 1367.1 149.5 HUMAN 1 7.564 -14.4361 IMPDSNDSPPAEREP-p Q9Y657;S199-p IMPDSNDSPPAEREP 0.686404096983296 0.018344717340816 0.0543333333333333 0.377 3.0668149004682 23.8976475211311 0.0549473836024663 0.377 0.493535628447448 0.00407601006627894 0.733950789628249 4.7642867055847 Q9Y657 SPIN1 Q9Y657.S199.p_SPIN1 Q9Y657_S199s _1_1_199_199 Q9Y657 Q9Y657 Spindlin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26110.26136.5 17.52 13.11 2.098 3 1 1 0 636.1179 3096.5924 S199s TMT10 192 (R) IMPDSNDsPPAEREPGEVVDSLVGK (Q) IMPDS(0.0)NDS(0.99)PPAEREPGEVVDS(0.0)LVGK K:TMT10,s:Phosphorylated S SPIN1 29714.2 7 2 3565.1 48.07 HUMAN 1 3.0668 23.8976 IMRVVELSPLKGSVS-p Q8TEK3;S297-p IMRVVELSPLKGSVS 0.139661670983594 0.00360607418522774 -0.501 -0.641666666666667 17.4939751175349 36.3349707044279 -0.501 -0.641666666666667 0.0178074809429097 0.000232542817212355 -3.36056977159179 -8.59889484799712 Q8TEK3 DOT1L Q8TEK3.S297.p_DOT1L Q8TEK3_S297s _1_1_297_297 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23004.23004.2 11.25 5.95 99 1 1 1 0 711.9227 1342.871 S297s TMT10 293 (R) VVELsPLK (G) VVELS(1.0)PLK K:TMT10,s:Phosphorylated S DOT1L 185648.6 2 1 132.1 534.85 HUMAN 1 -17.494 -36.335 IMSKHLDSPPAIPPR-p Q07889;S1178-p IMSKHLDSPPAIPPR 0.132087959934017 0.00239575414632687 -0.31 -0.834666666666667 18.1481916711443 40.1986522509363 -0.31 -0.834666666666667 0.0153172511338033 9.5528899552e-05 -3.49231871626815 -10.2210771967084 Q07889 SOS1 Q07889.S1178.p_SOS1 Q07889_S1178s _1_1_1178_1178 Q07889 Q07889|G5E9C8 Son of sevenless homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11378.11590.4 15.52 15.52 15.522 3 1 1 0 570.5634 2199.265 S1178s TMT10 1175 (K) HLDsPPAIPPRQPTSK (A) HLDS(0.99)PPAIPPRQPT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SOS1 153431.2 4 5 2313.1 88.35 HUMAN 1 -18.1482 -40.1987 IMTQQKDSFEMEEVQ-p P28290;S466-p IMTQQKDSFEMEEVQ 0.886941341140776 0.945818175866251 -0.023 -0.00833333333333332 1.01690492818839 0.347088456152413 -0.023 -0.00833333333333332 0.791242319104407 0.923190133555472 -0.278113491696177 -0.100986915101646 P28290 SSFA2 P28290.S466.p_SSFA2 P28290_S466s _1_1_466_466 P28290 P28290|P28290-3|E9PHV5|P28290-2 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24903.24903.5 24.19 23.99 1.752 7 1 1 0 941.6716 4624.3518 S466s TMT10 458 (R) NIMTQQKDsFEMEEVQSTEGEAPHVPATYQLGLTK (S) NIMT(0.0)QQKDS(0.99)FEMEEVQS(0.0)T(0.0)EGEAPHVPAT(0.0)Y(0.0)QLGLT(0.0)K K:TMT10,s:Phosphorylated S SSFA2 139638.7 10 12 73.1 652.35 HUMAN 1 -1.0169 -0.3471 IMVGMGYSQEEIQES-p J3KNR0;S364-p IMVGMGYSQEEIQES 0.199418709267342 0.112517556800134 0.377 -0.187666666666667 13.6218610608025 12.5153011303647 0.377 -0.187666666666667 0.0434324065530025 0.0560363561624373 2.62374994568713 -2.42281202406423 J3KNR0 NotFound J3KNR0.S364.p_NotFound J3KNR0_S364s_1_1_364_364 J3KNR0 J3KNR0|P27448-3|P27448-6|A0A0A0MQR8|P27448-8|A0A0A0MST9 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25355.25355.3 7.57 7.57 1.336 4 1 1 0 937.7967 2715.3985 M361m S364s TMT10 355 (R) IDIMVGmGYsQEEIQESLSK (M) IDIM(0.0)VGM(0.99)GY(0.0)S(0.99)QEEIQES(0.0)LS(0.0)K K:TMT10,m:Oxidized methionine,s:Phosphorylated S MARK3 87513.5 1 28 200.3 451.67 HUMAN 1 13.6219 -12.5153 INAAKGSSNSYAIKK-p M0R0R2;S206-p INAAKGSSNSYAIKK 0.971306772393636 0.537061533438633 -0.007 -0.0653333333333333 0.247271058005418 3.63266017660412 -0.00699999999999999 -0.0653333333333333 0.944654274790482 0.433245422014516 -0.0727028818684841 -0.846093097405903 M0R0R2 NotFound M0R0R2.S206.p_NotFound M0R0R2_S206s _1_1_206_206 M0R0R2 M0R0R2|P46782|M0QZN2 40S ribosomal protein S5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11132.11132.2 10.55 10.55 1.337 4 1 1 0 732.879 1384.7837 S206s TMT10 204 (K) GSsNSYAIK (K) GS(0.0)S(0.99)NS(0.0)Y(0.0)AIK K:TMT10,s:Phosphorylated S RPS5 25504 3 4 2365.1 86.45 HUMAN 1 -0.2473 -3.6327 INADKAPSQSESEPE-p F5H1U9;S1297-p INADKAPSQSESEPE 0.0722495595033206 0.4331238941977 -0.807666666666667 0.153333333333333 24.5362556116595 4.8417149432705 -0.807666666666667 0.153333333333333 0.00351863678655525 0.327965760328235 -4.92727533352363 1.07475868620892 F5H1U9 NotFound F5H1U9.S1297.p_NotFound F5H1U9_S1297s _1_1_1297_1297 F5H1U9 F5H1U9|O75970|O75970-2|O75970-3|O75970-5|B7ZB24 Multiple PDZ domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7546.7546.2 11.47 9.09 2.19 3 1 1 0 863.9193 1646.8638 S1297s TMT10 1295 (K) APsQSESEPEK (A) APS(0.99)QS(0.0)ES(0.0)EPEK K:TMT10,s:Phosphorylated S MPDZ 224434.7 2 7 1525.1 134.07 HUMAN 1 -24.5363 4.8417 INAEVDESDCGDFPD-p Q15003;S359-p INAEVDESDCGDFPD 0.0949352610946194 0.0927574980124341 0.329333333333333 0.19 21.6909011211911 13.6580031462774 0.329333333333333 0.19 0.00677500917803187 0.0430724608940338 4.25160193423103 2.62880855502886 Q15003 NCAPH Q15003.S359.p_NCAPH Q15003_S359s _1_1_359_359 Q15003 Q15003|E9PHA2|Q15003-2 Condensin complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24001.24001.5 30.04 30.04 3.594 3 1 1 0 1159.5009 5713.4734 S359s TMT10 345 (K) KNDQVFDINAEVDEsDCGDFPDGSLGDDFDANDEPDHTAVGDHEEFR (S) KNDQVFDINAEVDES(0.99)DCGDFPDGS(0.0)LGDDFDANDEPDHT(0.0)AVGDHEEFR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NCAPH 83360.5 1 10 558.1 272.98 HUMAN 1 21.6909 13.658 INAIQGGSFESPKKE-p Q9H4L5;S262-p INAIQGGSFESPKKE 0.807839135378139 0.00232985334139993 -0.0416666666666667 -0.848333333333333 1.78073879221319 40.486761922568 -0.0416666666666667 -0.848333333333333 0.663630168551732 8.93971776091695e-05 -0.459678312276709 -10.3524856013068 Q9H4L5 OSBPL3 Q9H4L5.S262.p_OSBPL3 Q9H4L5_S262s_1_1_262_262 Q9H4L5 Q9H4L5|Q9H4L5-3|Q9H4L5-5|Q9H4L5-7 Oxysterol-binding protein-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20055.20055.4 11.14 11.14 3.93 5 1 1 0 709.3826 2753.5441 N256n S262s TMT10 249 (R) TYSAPAInAIQGGsFESPKK (E) T(0.0)Y(0.0)S(0.0)APAIN(1.0)AIQGGS(0.99)FES(0.0)PKK K:TMT10,n:Deamidated,s:Phosphorylated S OSBPL3 102191.7 3 2 683.2 244.57 HUMAN 1 -1.7807 -40.4868 INEKFAGSAGWEGTE-p Q13123;S417-p INEKFAGSAGWEGTE 0.25625740360105 0.00907262965903867 -0.405666666666667 1.26133333333333 11.2324728226642 28.8961180587879 -0.405666666666667 1.26133333333333 0.0752926733866101 0.00128940156833897 -2.19688772165561 6.09397574167311 Q13123 IK Q13123.S417.p_IK Q13123_S417s _1_1_417_417 Q13123 Q13123|A0A0C4DGW5 Protein Red HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22793.22793.2 11.6 11.6 3.708 3 1 1 0 989.4907 1898.006 S417s TMT10 414 (K) FAGsAGWEGTESLK (K) FAGS(0.99)AGWEGT(0.0)ES(0.0)LK K:TMT10,s:Phosphorylated S IK 65715.2 1 1 2972.1 64.33 HUMAN 1 -11.2325 28.8961 INEPLSDSESEDERP-p O14617-5;S634-p INEPLSDSESEDERP 0.748585233589614 0.146935899326992 0.044 0.1495 2.38978032679243 10.9676767957436 0.044 0.1495 0.576795637915233 0.0800262230842873 0.593490356372939 2.14948175813108 O14617 AP3D1 O14617.5.S634.p_AP3D1 O14617-5_S632sS634s_2_2_632_634 O14617-5 O14617|O14617-2|O14617-4|O14617-3|O14617-5 Isoform 5 of AP-3 complex subunit delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30557.31214.4 24.26 24.26 1.134 3 2 2 0 978.468 3750.9227 S632s S634s TMT10 614 (K) KVPVPEGLDLDAWINEPLsDsESEDERPR (A) KVPVPEGLDLDAWINEPLS(0.99)DS(0.99)ES(0.0)EDERPR K:TMT10,s:Phosphorylated S AP3D1 137789.5 9 10 513.1 286.98 HUMAN 2 2.3898 10.9677 INGENLPTIILSSPT-p Q14207;T770-p INGENLPTIILSSPT 0.10503732738293 0.00295034438929059 0.555 1.09666666666667 20.610172436728 38.1499653045429 0.555 1.09666666666667 0.00868925927876602 0.000153109969347262 4.01114090715803 9.32958644909711 Q14207 NPAT Q14207.T770.p_NPAT Q14207_T770t _1_1_770_770 Q14207 Q14207 Protein NPAT HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36420.36420.4 27.43 26.57 1.154 14 1 1 0 1257.6667 4947.6909 T770t TMT10 742 (K) VIISDDPFVSSDTELTSAVSSINGENLPtIILSSPTKSPTK (N) VIIS(0.0)DDPFVS(0.0)S(0.0)DT(0.0)ELT(0.0)S(0.0)AVS(0.0)S(0.0)INGENLPT(0.99)IILS(0.0)S(0.0)PT(0.0)KS(0.0)PT(0.0)K K:TMT10,t:Phosphorylated T NPAT 155599.6 1 4 1274.1 159.34 HUMAN 1 20.6102 38.15 INGPTSASGDDISKL-p P51114;S587-p INGPTSASGDDISKL 0.537931629335923 0.116542468917028 0.0823333333333333 -0.169 4.97896843943153 12.313908498855 0.0823333333333333 -0.169 0.317762874918973 0.058696087044755 1.1002025361295 -2.38691235317049 P51114 FXR1 P51114.S587.p_FXR1 P51114_S587s _1_1_587_587 P51114 P51114|B4DXZ6|P51114-3 Fragile X mental retardation syndrome-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13191.13191.2 18.54 14.21 2.231 4 1 1 0 985.9964 1891.0173 S587s TMT10 579 (K) AINGPTSAsGDDISK (L) AINGPT(0.0)S(0.0)AS(0.99)GDDIS(0.0)K K:TMT10,s:Phosphorylated S FXR1 70061.9 4 4 553.1 273.48 HUMAN 1 4.979 -12.3139 INHLGAPSPRYLELD-p Q9Y5I4;S86-p INHLGAPSPRYLELD 0.787869611361046 0.327079353946646 -0.0486666666666667 0.117 1.99814598060823 6.4262005349084 -0.0486666666666667 0.117 0.631226760034354 0.227708869152712 -0.508391415337759 1.35980410646306 Q9Y5I4 PCDHAC2 Q9Y5I4.S86.p_PCDHAC2 Q9Y5I4_S86s_1_1_86_86 Q9Y5I4 Q9Y5I4|Q9Y5I4-2 Protocadherin alpha-C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3531.3531.2 7.43 1.28 99 1 1 1 0 686.3564 1290.748 N80n S86s TMT10 79 (R) InHLGAPsPR (Y) IN(1.0)HLGAPS(1.0)PR n:Deamidated,s:Phosphorylated S PCDHAC2 110075.6 2 1 3056.1 61.99 HUMAN 1 -1.9981 6.4262 INHQRIHTGEKPYEC-p P17028;T330-p INHQRIHTGEKPYEC 0.688287844973563 0.00363879152855353 0.0763333333333333 -0.661333333333333 3.04510989923498 36.2462924862766 0.0763333333333334 -0.661333333333333 0.496008375629142 0.000237339897992959 0.72955982772776 -8.56453421047608 P17028 ZNF24 P17028.T330.p_ZNF24 P17028_T330t _1_1_330_330 P17028 P17028 Zinc finger protein 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11037.11037.3 16.92 13.05 12.031 2 1 1 0 858.4331 2493.3197 T330t TMT10 328 (R) IHtGEKPYECVQCGK (S) IHT(0.99)GEKPY(0.0)ECVQCGK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ZNF24 42782.2 2 8 2565.1 78.32 HUMAN 1 3.0451 -36.2463 INHSRNGSYGESSLE-p Q8IY63;S724-p INHSRNGSYGESSLE 0.167516061063847 0.0229522378899302 0.294666666666667 0.416 15.4992231585609 22.3765308721833 0.294666666666667 0.416 0.0281888711277545 0.00578558012814963 2.97261584401158 4.40380753175115 Q8IY63 AMOTL1 Q8IY63.S724.p_AMOTL1 Q8IY63_S724s _1_1_724_724 Q8IY63 Q8IY63|Q8IY63-2 Angiomotin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24812.24812.4 26.44 17.29 2.101 4 1 1 0 832.3848 3246.5613 S724s TMT10 722 (R) NGsYGESSLEAHIWQEEEEVVQANRR (C) NGS(0.99)Y(0.0)GES(0.0)S(0.0)LEAHIWQEEEEVVQANRR s:Phosphorylated S AMOTL1 106914.7 1 3 1931.1 106.33 HUMAN 1 15.4992 22.3765 INKERRSSLSLEEAD-p Q5JTZ5;S88-p INKERRSSLSLEEAD 0.51500209639154 0.546057113945939 -0.0983333333333333 0.065 5.32101878544406 3.5339620725889 -0.0983333333333333 0.065 0.293696060712635 0.443204123903935 -1.16257460633099 0.826799002275866 Q5JTZ5 C9orf152 Q5JTZ5.S88.p_C9orf152 Q5JTZ5_S88s _1_1_88_88 Q5JTZ5 Q5JTZ5 Uncharacterized protein C9orf152 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11048.11048.2 13.41 13.41 1.18 4 1 1 0 922.4081 1763.8406 S88s Hydrogen 86 (R) RSsLSLEEADSEVEGR (L) RS(0.0)S(0.99)LS(0.0)LEEADS(0.0)EVEGR s:Phosphorylated S C9orf152 26655.7 8 1 2848.1 68.13 HUMAN 1 -5.321 3.534 INKRLSKSSATLWNS-p Q3KQU3;S273-p INKRLSKSSATLWNS 0.362002918323239 0.0328037346624027 0.424333333333333 -0.464333333333333 8.19974637970728 20.0226363750417 0.424333333333333 -0.464333333333333 0.151364964031585 0.0099480134206554 1.66979460531639 -3.88017397695119 Q3KQU3 MAP7D1 Q3KQU3.S273.p_MAP7D1 Q3KQU3_S273s _1_1_273_273 Q3KQU3 Q3KQU3 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13771.13771.2 17.77 17.77 2.108 5 1 1 0 757.863 1434.7539 S273s TMT10 273 (K) sSATLWNSPSR (N) S(0.99)S(0.0)AT(0.0)LWNS(0.0)PS(0.0)R s:Phosphorylated S MAP7D1 93160.6 3 8 160.1 495.56 HUMAN 1 8.1997 -20.0226 INKTATGYGFAEPYN-p P27986-4;Y687-p INKTATGYGFAEPYN 0.00874686268802314 0.00174309182338932 -1.441 -1.26233333333333 49.9443376037017 43.6502411614643 -1.441 -1.26233333333333 1.01289922683859e-05 4.31495115463418e-05 -15.7029383269133 -11.9016404085639 P27986 PIK3R1 P27986.4.Y687.p_PIK3R1 P27986-4_Y687y _1_1_687_687 P27986-4 P27986-4|P27986-2|P27986-3|P27986-5 Isoform 4 of Phosphatidylinositol 3-kinase regulatory subunit alpha GG20160819_MSz_CCLE_T4D7_pY_Injection_01.33836.33836.3 20.98 20.98 2.115 7 1 1 0 840.7536 2440.28 Y687y TMT10 683 (K) TATGyGFAEPYNLYSSLK (E) T(0.0)AT(0.0)GY(0.99)GFAEPY(0.0)NLY(0.0)S(0.0)S(0.0)LK K:TMT10,y:Phosphorylated Y PIK3R1 84872.2 3 6 9.1 106.64 HUMAN 1 -49.9443 -43.6502 INLKASKSMDLVPDE-p Q8TEW8;S710-p INLKASKSMDLVPDE 0.182722695333724 0.112532895650988 0.285333333333333 0.279333333333333 14.5190000061124 12.5137282811638 0.285333333333333 0.279333333333333 0.0353264502088368 0.0560566540716889 2.78871655478475 2.42253121715338 Q8TEW8 PARD3B Q8TEW8.S710.p_PARD3B Q8TEW8_S710s _1_1_710_710 Q8TEW8 Q8TEW8|Q8TEW8-2|Q8TEW8-3|Q8TEW8-6|Q8TEW8-5|A0A087X1S9|A0A087WYL6|A0A087WZG6|R4GN62 Partitioning defective 3 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18787.18787.3 13.49 13.49 13.485 2 1 1 0 553.6089 1578.8449 S710s TMT10 710 (K) sMDLVPDESK (V) S(0.99)MDLVPDES(0.0)K K:TMT10,s:Phosphorylated S PARD3B 133176.7 5 40 65.4 692.2 HUMAN 1 14.519 12.5137 INLNPVPSPNQKRSS-p Q6PJP8;S590-p INLNPVPSPNQKRSS 0.39120743112417 0.00687207119024638 0.201333333333333 -0.591333333333333 7.51492012786183 31.0258164091788 0.201333333333333 -0.591333333333333 0.177218063743389 0.000789620398529703 1.55087969853189 -6.73923872043672 Q6PJP8 DCLRE1A Q6PJP8.S590.p_DCLRE1A Q6PJP8_S590s _1_1_590_590 Q6PJP8 Q6PJP8 DNA cross-link repair 1A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.31479.31479.4 21.24 21.24 14.887 2 1 1 0 682.8728 2648.5023 S590s TMT10 574 (K) LLGESALEGINLNPVPsPNQK (R) LLGES(0.0)ALEGINLNPVPS(0.99)PNQK K:TMT10,s:Phosphorylated S DCLRE1A 117995 7 4 2309.1 88.53 HUMAN 1 7.5149 -31.0258 INLTRGPSGLGFNIV-p A0A087WYV9;S21-p INLTRGPSGLGFNIV 0.453487628176915 0.741322492483223 0.115333333333333 0.05 6.33613764143188 1.79179759647406 0.115333333333333 0.05 0.232480342008139 0.661942461139458 1.34423024533257 0.462132327391429 A0A087WYV9 SYNJ2BP-COX16 A0A087WYV9.S21.p_SYNJ2BP-COX16 A0A087WYV9_S21s _1_1_21_21 A0A087WYV9 A0A087WYV9|P57105 SYNJ2BP-COX16 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28450.28450.3 20.34 20.34 8.777 7 1 1 0 1066.1783 3116.5486 S21s TMT10 19 (R) GPsGLGFNIVGGTDQQYVSNDSGIYVSR (I) GPS(0.99)GLGFNIVGGT(0.0)DQQY(0.0)VS(0.0)NDS(0.0)GIY(0.0)VS(0.0)R s:Phosphorylated S SYNJ2BP-COX16 20526.7 3 1 5338.1 20.34 HUMAN 1 6.3361 1.7918 INMGDAFSPAPAGNQ-p Q8WXF1;S409-p INMGDAFSPAPAGNQ 0.771982430720165 0.229337239718646 0.0406666666666666 0.135333333333333 2.15140175408265 8.42580356490876 0.0406666666666666 0.135333333333333 0.609340191319244 0.143687716674194 0.542075979568826 1.70838572531007 Q8WXF1 PSPC1 Q8WXF1.S409.p_PSPC1 Q8WXF1_S409s _1_1_409_409 Q8WXF1 Q8WXF1 Paraspeckle component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26701.26701.5 23.34 23.34 99 1 1 1 0 671.699 3274.4886 S409s TMT10 400 (R) GAINMGDAFsPAPAGNQGPPPMMGMNMNNR (A) GAINM(0.0)GDAFS(1.0)PAPAGNQGPPPM(0.0)M(0.0)GM(0.0)NM(0.0)NNR s:Phosphorylated S PSPC1 58856.7 21 2 1850.1 111.09 HUMAN 1 2.1514 8.4258 INPSTANSPKCQELA-p P46937-9;S344-p INPSTANSPKCQELA 0.967118235264334 0.0218820643105278 -0.00833333333333335 -0.521666666666667 0.281968000449231 22.6847244651735 -0.00833333333333337 -0.521666666666667 0.937137248027653 0.00538924035913702 -0.0826023814175654 -4.47536589370934 P46937 YAP1 P46937.9.S344.p_YAP1 P46937-9_S344s _1_1_344_344 P46937-9 P46937-9|P46937-7|P46937-6|P46937-4 Isoform 9 of Transcriptional coactivator YAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14538.14538.3 15.39 9.38 2.106 3 1 1 0 851.1081 2471.3441 S344s TMT10 336 (R) NINPSTANsPKCQELALR (S) NINPS(0.0)T(0.0)ANS(0.99)PKCQELALR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S YAP1 54998.2 2 14 436.1 313.01 HUMAN 1 -0.282 -22.6847 INRDDEMSWNEIEVC-p Q9NQ86-4;S450-p INRDDEMSWNEIEVC 0.152026163448554 0.104471003157736 0.263333333333333 -0.356666666666667 16.4744365428462 12.9608553896656 0.263333333333333 -0.356666666666667 0.022519375659834 0.0505725044209406 3.1598254334476 -2.50264749709246 Q9NQ86 TRIM36 Q9NQ86.4.S450.p_TRIM36 Q9NQ86-4_S450s _1_1_450_450 Q9NQ86-4 Q9NQ86|Q9NQ86-4|E9PBG3 Isoform 4 of E3 ubiquitin-protein ligase TRIM36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17873.17873.4 13.63 12.87 8.135 3 1 1 0 795.3907 3098.5854 S450s TMT10 442 (R) KINRDDEMsWNEIEVCGTSK (I) KINRDDEMS(0.99)WNEIEVCGT(0.0)S(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TRIM36 83165.6 1 7 1499.1 136.16 HUMAN 1 16.4744 -12.9609 INRFCKDTFDKNYKA-p Q9BZG1;T76-p INRFCKDTFDKNYKA 0.330780000914883 0.109469799632147 -0.241333333333333 0.179333333333333 8.98076954884723 12.6893413871198 -0.241333333333333 0.179333333333333 0.126451226215256 0.0538351417975397 -1.8050338763809 2.45392760952987 Q9BZG1 RAB34 Q9BZG1.T76.p_RAB34 Q9BZG1_T76t _1_1_76_76 Q9BZG1 E7ES60|Q9BZG1|Q9BZG1-2|Q96PJ7|H7C0Y7 Ras-related protein Rab-34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15207.15207.3 9.17 2.19 99 1 1 1 0 609.9831 1747.9656 T76t TMT10 72 (R) FCKDtFDK (N) FCKDT(1.0)FDK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T RAB34 29500.4 2 1 4420.1 31.72 HUMAN 1 -8.9808 12.6893 INRGFGDSFGRLGGG-p A0A0A0MQW0;S431-p INRGFGDSFGRLGGG 0.290216881946097 0.420826921348439 -0.384666666666667 0.0886666666666667 10.1253732209638 5.00353393641781 -0.384666666666667 0.0886666666666667 0.0971544456079401 0.315970550161855 -2.00350073904597 1.1044823165218 A0A0A0MQW0 NotFound A0A0A0MQW0.S431.p_NotFound A0A0A0MQW0_S431s _1_1_431_431 A0A0A0MQW0 A0A0A0MR39|A0A0A0MQW0|A0A087WUT0|A0A0C4DGV1 Myelin expression factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13066.13066.2 11.55 11.55 99 1 1 1 0 576.2582 1071.5421 S431s TMT10 427 (R) GFGDsFGR (L) GFGDS(1.0)FGR s:Phosphorylated S MYEF2 62184.4 3 3 670.1 249.19 HUMAN 1 -10.1254 5.0035 INSDPELSNCENFQK-p Q8IX90;S124-p INSDPELSNCENFQK 0.971689010406699 0.0102221069934532 -0.012 -0.742333333333333 0.242192847828227 27.9536981436595 -0.0120000000000001 -0.742333333333333 0.945759506126312 0.00160188076176472 -0.0712480929665821 -5.82448409142676 Q8IX90 SKA3 Q8IX90.S124.p_SKA3 Q8IX90_S110sS124s_2_2_110_124 Q8IX90 Q8IX90|Q8IX90-3 Spindle and kinetochore-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14475.14475.4 11.97 11.97 2.553 3 2 2 0 1031.26 3961.0895 S110s S124s N125n TMT10 106 (R) VKKNsVHEQEAINSDPELsnCENFQK (T) VKKN(0.0)S(0.99)VHEQEAIN(0.0)S(0.0)DPELS(0.99)N(0.99)CEN(0.0)FQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated SKA3 46872 3 10 966.1 193.88 HUMAN 1 -0.2422 -27.9537 INSSTENSDEGLKVR-p R4GMW8;S882-p INSSTENSDEGLKVR 0.904619854374241 0.419192834061291 0.0223333333333333 -0.135333333333333 0.856032027176768 5.02511023861065 0.0223333333333333 -0.135333333333333 0.821101408825805 0.314404661272179 0.237365199068424 -1.1084327305553 R4GMW8 NotFound R4GMW8.S882.p_NotFound R4GMW8_S882s _1_1_882_882 R4GMW8 R4GMW8|A0A1W2PS85|P28715 BIVM-ERCC5 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12288.12288.3 14.38 11.21 4.319 4 1 1 0 644.6513 1851.97 S882s TMT10 875 (R) INSSTENsDEGLK (V) INS(0.0)S(0.0)T(0.0)ENS(0.99)DEGLK K:TMT10,s:Phosphorylated S BIVM-ERCC5 185876.1 1 8 561.1 271.77 HUMAN 1 0.856 -5.0251 INSVDGESPNGSSDR-p Q9NUY8;S474-p INSVDGESPNGSSDR 0.918274613085567 0.372368355903318 -0.027 -0.134 0.722793331186233 5.69275790664789 -0.0270000000000001 -0.134 0.846682662609308 0.269602682683472 -0.202821633750208 -1.22935291127581 Q9NUY8 TBC1D23 Q9NUY8.S474.p_TBC1D23 Q9NUY8_S474s _1_1_474_474 Q9NUY8 Q9NUY8|Q9NUY8-2|E9PGE5 TBC1 domain family member 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7969.7969.2 19.14 19.14 4.227 6 1 1 0 1008.9391 1936.9046 S474s TMT10 465 (R) SSINSVDGEsPNGSSDR (G) S(0.0)S(0.0)INS(0.0)VDGES(0.99)PNGS(0.0)S(0.0)DR s:Phosphorylated S TBC1D23 79176.3 2 4 2254.1 91.17 HUMAN 1 -0.7228 -5.6928 INTKALQSPKRPRSP-p P78347;S668-p INTKALQSPKRPRSP 0.608234333641847 0.00320981770772267 0.220666666666667 -0.962666666666667 3.9978929589022 37.396895431632 0.220666666666667 -0.962666666666667 0.398300364739063 0.000182100214280369 0.916726828473323 -9.01995201333178 P78347 GTF2I P78347.S668.p_GTF2I P78347_S668s _1_1_668_668 P78347 P78347|P78347-3|P78347-4|P78347-2 General transcription factor II-I HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4676.4676.4 7.47 7.47 99 1 1 1 0 398.4864 1510.9582 S668s TMT10 665 (K) ALQsPKRPR (S) ALQS(1.0)PKRPR K:TMT10,s:Phosphorylated S GTF2I 112927.8 4 8 140.1 523.54 HUMAN 1 3.9979 -37.3969 INTMLQLSPEEKGKL-p Q7Z3J3;S1743-p INTMLQLSPEEKGKL 0.80247376174233 0.0208641424440672 -0.0363333333333333 -0.423 1.84011269113494 22.9865659460282 -0.0363333333333333 -0.423 0.654619187727501 0.00502739959012646 -0.473095315915775 -4.54616452087161 Q7Z3J3 RGPD4 Q7Z3J3.S1743.p_RGPD4 Q7Z3J3_S1743s _1_1_1743_1743 Q7Z3J3 Q99666|O14715|Q7Z3J3|Q8IWJ2|J3KQ37 RanBP2-like and GRIP domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37350.37350.3 20.34 20.34 5.762 2 1 1 0 788.4397 2283.3398 S1743s TMT10 1732 (R) LLPVINTMLQLsPEEK (G) LLPVINT(0.0)MLQLS(0.99)PEEK K:TMT10,s:Phosphorylated S RGPD4 198768.5 1 87 9.99 1298.62 HUMAN 1 -1.8401 -22.9866 INVHTPNSQKVDSQK-p Q86Y07;S339-p INVHTPNSQKVDSQK 0.164495596876669 0.451537102009489 0.237 0.0720000000000001 15.7002212866679 4.60163596523446 0.237 0.0720000000000001 0.0269139766527572 0.346606261041451 3.01083894953739 1.03032783704855 Q86Y07 VRK2 Q86Y07.S339.p_VRK2 Q86Y07_S339s _1_1_339_339 Q86Y07 Q86Y07|Q86Y07-3|Q86Y07-2|Q86Y07-5|Q86Y07-4 Serine/threonine-protein kinase VRK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9752.9752.4 15.68 15.68 1.772 4 1 1 0 684.3669 2654.4829 S339s TMT10 329 (K) GQSINVHTPNsQKVDSQK (A) GQS(0.0)INVHT(0.0)PNS(0.99)QKVDS(0.0)QK K:TMT10,s:Phosphorylated S VRK2 58595.9 3 2 4705.1 27.69 HUMAN 1 15.7002 4.6016 INVPELPTPDEDNKL-p O43264;T438-p INVPELPTPDEDNKL 0.581059694963249 0.302607382543745 0.0746666666666667 -0.105666666666667 4.33696620049323 6.85383227835349 0.0746666666666667 -0.105666666666667 0.368386222979385 0.206355843787166 0.981017489035172 -1.43501408729394 O43264 ZW10 O43264.T438.p_ZW10 O43264_T438t _1_1_438_438 O43264 O43264|O43264-2 Centromere/kinetochore protein zw10 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25061.25061.4 17.79 17.79 99 1 1 1 0 737.149 2865.6177 T438t TMT10 431 (K) INVPELPtPDEDNKLEVQK (V) INVPELPT(1.0)PDEDNKLEVQK K:TMT10,t:Phosphorylated T ZW10 89683.7 5 4 3533.1 48.84 HUMAN 1 4.337 -6.8538 IPADLQGSRKGSLSS-p Q92870-4;S331-p IPADLQGSRKGSLSS 0.121424171475698 0.0403716565072845 0.299 0.344 19.0416969602661 18.6913307947587 0.299 0.344 0.012468962073921 0.0135165831537352 3.6762394872021 3.60046254141033 Q92870 APBB2 Q92870.4.S331.p_APBB2 Q92870-4_S331s _1_1_331_331 Q92870-4 Q92870-4|G5E9Y1|Q92870-2 Isoform 4 of Amyloid-beta A4 precursor protein-binding family B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28494.28494.5 17.8 16.11 4.978 9 1 1 0 802.9999 3930.9976 S331s TMT10 300 (R) VSDIAGTYYWHIPTGTTQWERPVSIPADLQGsR (K) VS(0.0)DIAGT(0.0)Y(0.0)Y(0.0)WHIPT(0.0)GT(0.0)T(0.0)QWERPVS(0.0)IPADLQGS(0.99)R s:Phosphorylated S APBB2 84356.2 2 11 667.1 249.66 HUMAN 1 19.0417 18.6913 IPAKLHNSLIGTKGR-p Q00341;S667-p IPAKLHNSLIGTKGR 0.247086653836424 0.082142595197567 -0.247 -0.309333333333333 11.5928073077935 14.3849156175895 -0.247 -0.309333333333333 0.0692977715902754 0.0364341329067239 -2.26031111345277 -2.76215527589732 Q00341 HDLBP Q00341.S667.p_HDLBP Q00341_S667s _1_1_667_667 Q00341 Q00341|A0A024R4E5|Q00341-2 Vigilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13888.13888.3 10.47 5.35 3.848 2 1 1 0 507.6253 1440.8939 S667s TMT10 664 (K) LHNsLIGTK (G) LHNS(0.99)LIGT(0.0)K K:TMT10,s:Phosphorylated S HDLBP 142080.7 1 4 775.1 227.26 HUMAN 1 -11.5928 -14.3849 IPANPNMSPLESIKA-p P34913;S370-p IPANPNMSPLESIKA 0.689385882760621 0.248258785678048 0.054 0.129666666666667 3.03052083519942 7.97127522526701 0.054 0.129666666666667 0.497677396573835 0.159541061568955 0.726604635033625 1.62966263172878 P34913 EPHX2 P34913.S370.p_EPHX2 P34913_S370s _1_1_370_370 P34913 P34913|E5RFU2|P34913-2|P34913-3|E5RFH6 Bifunctional epoxide hydrolase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32961.32961.3 17.14 17.14 4.624 4 1 1 0 983.8557 2869.5898 S370s TMT10 354 (R) AVASLNTPFIPANPNMsPLESIK (A) AVAS(0.0)LNT(0.0)PFIPANPNMS(0.99)PLES(0.0)IK K:TMT10,s:Phosphorylated S EPHX2 63356.4 1 1 5687.1 17.14 HUMAN 1 3.0305 7.9713 IPAPAEKTPVKKKAK-p P16402;T18-p IPAPAEKTPVKKKAK 0.278970775596523 0.00110103410174541 -0.199333333333333 -1.73933333333333 10.4815263361559 49.8465274210213 -0.199333333333333 -1.73933333333333 0.0895050143202882 1.03597018788861e-05 -2.06550652930793 -15.5883236693787 P16402 HIST1H1D P16402.T18.p_HIST1H1D P16402_T18t _1_1_18_18 P16402 P16402 Histone H1.3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20858.20858.4 16.84 16.84 3.221 4 1 1 0 739.6765 2875.7112 T18t Acetyl 2 (M) SETAPLAPTIPAPAEKtPVKK (K) S(0.0)ET(0.0)APLAPT(0.0)IPAPAEKT(0.99)PVKK K:TMT10,t:Phosphorylated T HIST1H1D 22349.5 22 15 738.1 234.77 HUMAN 1 -10.4815 -49.8465 IPAPPPITPKSAHRT-p A0A1C7CYX1;T687-p IPAPPPITPKSAHRT 0.194748055065004 0.0993166857898972 0.217 0.178666666666667 13.8643143454745 13.2540135764361 0.217 0.178666666666667 0.0410741481713103 0.0472714193424218 2.66804002917343 2.5555061624039 A0A1C7CYX1 NotFound A0A1C7CYX1.T687.p_NotFound A0A1C7CYX1_T687t _1_1_687_687 A0A1C7CYX1 A0A1C7CYX1|Q6PJG2 ELM2 and SANT domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34113.34113.5 26.85 26.85 3.151 7 1 1 0 622.7387 3029.6963 T687t TMT10 665 (R) EGSGLYFNAIISTSTIPAPPPItPK (S) EGS(0.0)GLY(0.0)FNAIIS(0.0)T(0.0)S(0.0)T(0.0)IPAPPPIT(0.99)PK K:TMT10,t:Phosphorylated T ELMSAN1 121244.8 9 5 548.1 275.48 HUMAN 1 13.8643 13.254 IPCDSPQSDPVDTPT-p P46013;S1256-p IPCDSPQSDPVDTPT 0.307433256565227 0.021516816782045 0.163 -0.422 9.57315309891976 22.7954787964125 0.163 -0.422 0.110327731898637 0.00525354093231779 1.90763818111629 -4.50126106528155 P46013 MKI67 P46013.S1256.p_MKI67 P46013_S1253sS1256s_2_2_1253_1256 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18071.18071.3 16.51 16.51 6.049 6 2 2 0 855.0547 2403.2114 S1253s S1256s TMT10 1249 (K) IPCDsPQsDPVDTPTSTK (Q) IPCDS(0.99)PQS(0.99)DPVDT(0.0)PT(0.0)S(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MKI67 360912.4 5 101 5.1 1918.46 HUMAN 1 9.5732 -22.7955 IPCRNSGSDGSPSPL-p Q9HCH0;S489-p IPCRNSGSDGSPSPL 0.567747259590119 0.41332216976651 0.078 -0.0786666666666666 4.52516887431248 5.10455134018069 0.078 -0.0786666666666666 0.35276306924932 0.308705854625642 1.01627630275169 -1.12295260703562 Q9HCH0 NCKAP5L Q9HCH0.S489.p_NCKAP5L Q9HCH0_S489s _1_1_489_489 Q9HCH0 Q9HCH0|Q9HCH0-3|Q9HCH0-2 Nck-associated protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12756.12756.2 15.7 9.95 1.857 4 1 1 0 833.9034 1586.8336 S489s TMT10 486 (R) NSGsDGSPSPLLAR (R) NS(0.0)GS(0.99)DGS(0.0)PS(0.0)PLLAR s:Phosphorylated S NCKAP5L 140323.1 3 6 609.1 261.98 HUMAN 1 4.5252 -5.1046 IPDDQKVSDDDKEKG-p Q86UE4;S426-p IPDDQKVSDDDKEKG 0.649743378726889 0.626026907213467 0.0646666666666667 -0.066 3.51285971528416 2.76753641773685 0.0646666666666667 -0.066 0.44536289203811 0.5287451030795 0.822786418402595 -0.672697146653475 Q86UE4 MTDH Q86UE4.S426.p_MTDH Q86UE4_S426s _1_1_426_426 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13970.14447.4 18.63 18.63 7.549 3 1 1 0 1028.0483 4029.2001 S426s TMT10 415 (K) SQEPIPDDQKVsDDDKEKGEGALPTGK (S) S(0.0)QEPIPDDQKVS(0.99)DDDKEKGEGALPT(0.0)GK K:TMT10,s:Phosphorylated S MTDH 63892.9 17 19 77.1 644.48 HUMAN 1 3.5129 -2.7675 IPDDRAASVPALSDL-p Q9UPX8-3;S1430-p IPDDRAASVPALSDL 0.745371790338934 0.978108959441114 0.057 0.00300000000000002 2.42161740793159 0.137532560297168 0.057 0.00300000000000002 0.572582748895101 0.968828138651544 0.600272439101214 0.0409148711137671 Q9UPX8 SHANK2 Q9UPX8.3.S1430.p_SHANK2 Q9UPX8-3_S1430s _1_1_1430_1430 Q9UPX8-3 Q9UPX8-3|A6NHU9 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27265.27265.3 17.36 17.36 8.17 2 1 1 0 570.3274 1628.9987 S1430s TMT10 1428 (R) AAsVPALSDLVK (Q) AAS(0.99)VPALS(0.0)DLVK K:TMT10,s:Phosphorylated S SHANK2 202341.2 1 24 86.1 628.23 HUMAN 1 2.4216 0.1375 IPDEMPDSPIQEKSE-p O95613;S2177-p IPDEMPDSPIQEKSE 0.0787901256291823 0.0220306453424827 -0.531333333333333 -0.314666666666667 23.5430617269901 22.6415203794334 -0.531333333333333 -0.314666666666667 0.00442276462523997 0.00544312066551526 -4.68399308007936 -4.46529033447672 O95613 PCNT O95613.S2177.p_PCNT O95613_S2177s _1_1_2177_2177 O95613 O95613|O95613-2 Pericentrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30640.30640.4 20.8 18.66 4.52 9 1 1 0 1158.5416 4551.173 S2177s TMT10 2165 (K) NWDSLIPDEMPDsPIQEKSECQDMSLSSPTSVLGGSR (H) NWDS(0.0)LIPDEMPDS(0.99)PIQEKS(0.0)ECQDMS(0.0)LS(0.0)S(0.0)PT(0.0)S(0.0)VLGGS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PCNT 380826.2 8 11 222.1 428 HUMAN 1 -23.5431 -22.6415 IPDILNASNLKTFRE-p Q96EY4;S138-p IPDILNASNLKTFRE 0.929264170031949 0.16686940797298 -0.0153333333333333 -0.218333333333333 0.632913811259805 10.2278111893316 -0.0153333333333333 -0.218333333333333 0.864387780628643 0.0948896579359442 -0.179081988712963 -2.02048018749679 Q96EY4 TMA16 Q96EY4.S138.p_TMA16 Q96EY4_S138s _1_1_138_138 Q96EY4 Q96EY4|D6RA57 Translation machinery-associated protein 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.36143.36143.3 19.76 19.76 11.033 2 1 1 0 929.8196 2707.4707 S138s TMT10 122 (R) QQFEGYGLEIPDILNAsNLK (T) QQFEGY(0.0)GLEIPDILNAS(0.99)NLK K:TMT10,s:Phosphorylated S TMA16 24092.1 3 1 5391.1 19.76 HUMAN 1 -0.6329 -10.2278 IPECKPESPARYSNK-p Q8IZ40;S63-p IPECKPESPARYSNK 0.259889123537714 0.00537601195102094 -0.190666666666667 -0.580666666666667 11.0999835684082 32.9528703901296 -0.190666666666667 -0.580666666666667 0.0776250053575946 0.000506655732727639 -2.17363492720076 -7.3701178621524 Q8IZ40 RCOR2 Q8IZ40.S63.p_RCOR2 Q8IZ40_S63s _1_1_63_63 Q8IZ40 Q8IZ40 REST corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16999.16999.4 19.5 18.46 11.466 3 1 1 0 664.3394 2574.375 S63s TMT10 48 (R) VGTNYQAVIPECKPEsPAR (Y) VGT(0.0)NY(0.0)QAVIPECKPES(0.99)PAR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RCOR2 58182.1 2 1 1817.3 112.96 HUMAN 1 -11.1 -32.9529 IPECQKKSPISKSMG-p Q6P0N0;S690-p IPECQKKSPISKSMG 0.778996094549543 0.0016237919479163 0.0486666666666667 -1.11066666666667 2.08411352497731 44.4616465407949 0.0486666666666667 -1.11066666666667 0.618854634290492 3.57960697723138e-05 0.52735004360006 -12.3324172846128 Q6P0N0 MIS18BP1 Q6P0N0.S690.p_MIS18BP1 Q6P0N0_S690s _1_1_690_690 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20528.20528.5 15.62 11.79 2.286 3 1 1 0 609.5488 2963.741 S690s TMT10 677 (K) AVTDFVIPECQKKsPISK (S) AVT(0.0)DFVIPECQKKS(0.99)PIS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MIS18BP1 129996 5 24 54.1 728.39 HUMAN 1 2.0841 -44.4616 IPEDASESEEKLDQK-p Q9H2P0;S923-p IPEDASESEEKLDQK 0.916243999962641 0.0108261277773817 0.0223333333333333 0.442333333333333 0.740721903827048 27.5453823736712 0.0223333333333333 0.442333333333333 0.843194586516885 0.00175979371630955 0.207513966480014 5.71060667128461 Q9H2P0 ADNP Q9H2P0.S923.p_ADNP Q9H2P0_S921sS923s_2_2_921_923 Q9H2P0 Q9H2P0 Activity-dependent neuroprotector homeobox protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19725.19725.5 8.05 8.05 1.18 7 2 2 0 1016.9197 4920.6226 S921s S923s TMT10 915 (K) VIPEDAsEsEEKLDQKEDGSKYETIHLTEEPTK (L) VIPEDAS(0.99)ES(0.99)EEKLDQKEDGS(0.0)KY(0.0)ET(0.0)IHLT(0.0)EEPT(0.0)K K:TMT10,s:Phosphorylated S ADNP 124930 1 17 276.1 391.38 HUMAN 1 0.7407 27.5454 IPEGKVGSLPLEKGS-p Q7Z2K8;S608-p IPEGKVGSLPLEKGS 0.0517349795377485 0.215477560410001 -0.559333333333333 -0.185 28.1330742189722 8.77248033135567 -0.559333333333333 -0.185 0.00153706621962186 0.132663657609786 -5.88361321756782 -1.7683603519601 Q7Z2K8 GPRIN1 Q7Z2K8.S608.p_GPRIN1 Q7Z2K8_S608s _1_1_608_608 Q7Z2K8 Q7Z2K8|Q7Z2K8-2 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20606.20606.2 8.12 8.12 99 1 1 1 0 690.897 1300.8241 S608s TMT10 606 (K) VGsLPLEK (G) VGS(1.0)LPLEK K:TMT10,s:Phosphorylated S GPRIN1 103196.3 1 15 292.1 381.4 HUMAN 1 -28.1331 -8.7725 IPEPAHAYAQPQTTT-p P46109;Y207-p IPEPAHAYAQPQTTT 0.419357064060902 0.477677845922323 0.121666666666667 0.170666666666667 6.96942009927339 4.27974391405951 0.121666666666667 0.170666666666667 0.200936109881045 0.37327216750108 1.4556592942999 0.970066424087954 P46109 CRKL P46109.Y207.p_CRKL P46109_Y207y _1_1_207_207 P46109 P46109 Crk-like protein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.32573.32664.4 30.81 29.95 3.638 12 1 1 0 1335.937 5260.7319 Y207y TMT10 194 (R) NSNSYGIPEPAHAyAQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAK (A) NS(0.0)NS(0.0)Y(0.0)GIPEPAHAY(0.99)AQPQT(0.0)T(0.0)T(0.0)PLPAVS(0.0)GS(0.0)PGAAIT(0.0)PLPS(0.0)T(0.0)QNGPVFAK K:TMT10,y:Phosphorylated Y CRKL 33890.5 16 1 34.1 57.79 HUMAN 1 6.9694 4.2797 IPEPKEPSPEKNSKK-p A9Z1X7;S260-p IPEPKEPSPEKNSKK 0.623346333070587 0.0827943988848134 -0.135666666666667 0.29 3.81370885885885 14.3262098733986 -0.135666666666667 0.29 0.415555575987179 0.0369299749156199 -0.881348103026194 2.75131308771476 A9Z1X7 NotFound A9Z1X7.S260.p_NotFound A9Z1X7_S260s _1_1_260_260 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.38852.38852.5 24.37 24.37 14.956 6 1 1 0 1033.99 5085.9515 S260s TMT10 230 (K) VKEPSVQEATSTSDILKVPKPEPIPEPKEPsPEK (N) VKEPS(0.0)VQEAT(0.0)S(0.0)T(0.0)S(0.0)DILKVPKPEPIPEPKEPS(0.99)PEK K:TMT10,s:Phosphorylated S SRRM1 103445.7 19 5 8.1 1346.57 HUMAN 1 -3.8137 14.3262 IPETPPQTPPQVLDS-p Q969H4;T293-p IPETPPQTPPQVLDS 0.859564008462243 0.216257875386514 0.037 -0.134333333333333 1.28281353650829 8.75003484561197 0.037 -0.134333333333333 0.744249662453493 0.133351073269881 0.343388387162332 -1.76447809192834 Q969H4 CNKSR1 Q969H4.T293.p_CNKSR1 Q969H4_T289tT293t_2_2_289_293 Q969H4 Q969H4|Q969H4-2|G3V160 Connector enhancer of kinase suppressor of ras 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21724.21724.4 15.91 15.91 8.62 3 2 2 0 774.1525 2933.6613 T289t T293t TMT10 283 (K) KIPIPEtPPQtPPQVLDSPHQR (S) KIPIPET(0.99)PPQT(0.99)PPQVLDS(0.0)PHQR K:TMT10,t:Phosphorylated T CNKSR1 80560.2 5 9 1912.1 107.86 HUMAN 1 1.2828 -8.75 IPGFQQAS_______-p Q9HD15;S236-p IPGFQQAS_______ 0.783485670526388 0.136563692199139 0.0786666666666666 -0.17 2.03790574136408 11.3931158898138 0.0786666666666666 -0.17 0.62547423679606 0.0725585192187108 0.517180269446071 -2.22408458863913 Q9HD15 SRA1 Q9HD15.S236.p_SRA1 Q9HD15_S236s _1_1_236_236 Q9HD15 Q9HD15 Steroid receptor RNA activator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13236.13236.2 12.51 12.51 12.506 2 1 1 0 754.8587 1428.7433 S236s TMT10 226 (K) NHTIPGFQQAs (-) NHT(0.0)IPGFQQAS(0.99) s:Phosphorylated S SRA1 25843.7 1 3 1496.1 136.55 HUMAN 1 2.0379 -11.3931 IPGPRRGSGPEIFTF-p P46695;S31-p IPGPRRGSGPEIFTF 0.282291537251573 0.592020135778882 0.22 -0.057 10.3866611374125 3.08067481150744 0.22 -0.057 0.0914816283336905 0.491963087980624 2.04897414323539 -0.736646165935821 P46695 IER3 P46695.S31.p_IER3 P46695_S31s _1_1_31_31 P46695 P46695|Q5ST79 Radiation-inducible immediate-early gene IEX-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23473.23473.4 21.07 16.47 4.014 4 1 1 0 790.9018 3080.6115 S31s TMT10 29 (R) RGsGPEIFTFDPLPEPAAAPAGRPSASR (G) RGS(0.99)GPEIFT(0.0)FDPLPEPAAAPAGRPS(0.0)AS(0.0)R s:Phosphorylated S IER3 17073.4 3 1 5275.1 21.07 HUMAN 1 10.3867 -3.0807 IPGQPLPSPTRLHLG-p Q9C0C4;S772-p IPGQPLPSPTRLHLG 0.877965189707424 0.0758304493142058 0.0226666666666667 0.319 1.11202157373884 14.8683784884292 0.0226666666666667 0.319 0.774101381687359 0.0325958380334571 0.30174653536104 2.85196068447959 Q9C0C4 SEMA4C Q9C0C4.S772.p_SEMA4C Q9C0C4_S772s _1_1_772_772 Q9C0C4 Q9C0C4 Semaphorin-4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18707.18707.3 17.7 17.7 1.254 3 1 1 0 886.4438 2577.3445 S772s TMT10 752 (R) CQPGGGPPSPPPGIPGQPLPsPTR (L) CQPGGGPPS(0.0)PPPGIPGQPLPS(0.99)PT(0.0)R C:Carbamidomethylation,s:Phosphorylated S SEMA4C 93819.3 1 3 3588.1 47.65 HUMAN 1 1.112 14.8684 IPGSNLDSEPRIQTD-p Q6P4E1;S332-p IPGSNLDSEPRIQTD 0.715158508515525 0.350820689184595 0.051 0.0923333333333333 2.74506150796695 6.03035516890914 0.051 0.0923333333333334 0.531488472124138 0.249439072567265 0.668138051057206 1.28966106621332 Q6P4E1 CASC4 Q6P4E1.S332.p_CASC4 Q6P4E1_S332s _1_1_332_332 Q6P4E1 Q6P4E1-4|Q6P4E1-5|Q6P4E1-2 Protein CASC4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18692.18692.2 13.89 6.75 3.73 2 1 1 0 803.9064 1526.8376 S332s TMT10 324 (R) LIPGSNLDsEPR (I) LIPGS(0.0)NLDS(0.99)EPR s:Phosphorylated S CASC4 48977.6 5 3 2657.1 74.96 HUMAN 1 2.7451 6.0304 IPHEGKHTPLYERSS-p Q9NZB2-6;T428-p IPHEGKHTPLYERSS 0.253566244688488 0.184287268283628 0.202333333333333 -0.164333333333333 11.3485609152119 9.65771659046927 0.202333333333333 -0.164333333333333 0.073306740322536 0.108200269116692 2.21729078440797 -1.92155328489141 Q9NZB2 FAM120A Q9NZB2.6.T428.p_FAM120A Q9NZB2-6_T428t _1_1_428_428 Q9NZB2-6 Q9NZB2-6|Q9NZB2-4|Q9NZB2-5 Isoform F of Constitutive coactivator of PPAR-gamma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11302.11302.4 20.79 13.46 2.052 6 1 1 0 817.1557 3185.638 T428t TMT10 411 (K) NLTEQNSYSNIPHEGKHtPLYER (S) NLT(0.0)EQNS(0.0)Y(0.0)S(0.0)NIPHEGKHT(0.99)PLY(0.0)ER K:TMT10,t:Phosphorylated T FAM120A 126524.7 2 4 839.1 214.86 HUMAN 1 11.3486 -9.6577 IPIPAPASPGTRPTL-p Q96PE2;S527-p IPIPAPASPGTRPTL 0.298374898617246 0.0297329085588789 -0.163 -0.334333333333333 9.87315965492851 20.6613626726287 -0.163 -0.334333333333333 0.102963674859888 0.00858744033717554 -1.95968215333238 -4.01842560093792 Q96PE2 ARHGEF17 Q96PE2.S527.p_ARHGEF17 Q96PE2_S527s _1_1_527_527 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25373.25373.5 28.39 26.35 1.326 6 1 1 0 849.2515 4162.2661 S527s TMT10 498 (R) GSNPLDGRDSPSAGGPVGQLEPIPIPAPAsPGTRPTLK (D) GS(0.0)NPLDGRDS(0.0)PS(0.0)AGGPVGQLEPIPIPAPAS(0.99)PGT(0.0)RPT(0.0)LK K:TMT10,s:Phosphorylated S ARHGEF17 223779.6 10 18 30.1 908.19 HUMAN 1 -9.8732 -20.6614 IPKADIPSPRKEFSA-p O14682;S328-p IPKADIPSPRKEFSA 0.509052306676372 0.340779930865907 0.092 -0.106333333333333 5.41351656519539 6.19322644483137 0.092 -0.106333333333333 0.287506947341811 0.240257722285544 1.17932638537067 -1.31858995825701 O14682 ENC1 O14682.S328.p_ENC1 O14682_S328s _1_1_328_328 O14682 O14682|O14682-2|Q9H0H3 Ectoderm-neural cortex protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9768.9768.3 8.88 8.88 99 1 1 1 0 474.6024 1341.8255 S328s TMT10 324 (K) ADIPsPRK (E) ADIPS(1.0)PRK K:TMT10,s:Phosphorylated S ENC1 67326.8 1 2 3521.2 49.1 HUMAN 1 5.4135 -6.1932 IPKDLAGSIIGKGGQ-p P61978-2;S401-p IPKDLAGSIIGKGGQ 0.727791177326058 0.353541651009375 -0.0816666666666667 0.111666666666667 2.61814083932381 5.98762816066166 -0.0816666666666667 0.111666666666667 0.547250183755949 0.251905229778018 -0.641724758699886 1.28205491556329 P61978 HNRNPK P61978.2.S401.p_HNRNPK P61978-2_S401s _1_1_401_401 P61978-2 P61978-2|P61978-3 Isoform 2 of Heterogeneous nuclear ribonucleoprotein K HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20541.20541.2 12.86 12.86 99 1 1 1 0 706.4021 1331.8299 S401s TMT10 397 (K) DLAGsIIGK (G) DLAGS(1.0)IIGK K:TMT10,s:Phosphorylated S HNRNPK 51312.6 2 10 595.1 264.01 HUMAN 1 -2.6181 5.9876 IPKSFNYSPNSSTSE-p Q5VT52;S593-p IPKSFNYSPNSSTSE 0.390532605380697 0.229132285156722 0.119 0.164333333333333 7.54552672219365 8.43026349399154 0.119 0.164333333333333 0.175973522618086 0.143540234236303 1.5562066241993 1.70915753690708 Q5VT52 RPRD2 Q5VT52.S593.p_RPRD2 Q5VT52_S593s _1_1_593_593 Q5VT52 Q5VT52|Q5VT52-3|Q5VT52-2|Q5VT52-5 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14930.14948.2 20.53 20.53 1.263 12 1 1 0 1303.1068 2525.2408 S593s TMT10 589 (K) SFNYsPNSSTSEVSSTSASK (A) S(0.0)FNY(0.0)S(0.99)PNS(0.0)S(0.0)T(0.0)S(0.0)EVS(0.0)S(0.0)T(0.0)S(0.0)AS(0.0)K K:TMT10,s:Phosphorylated S RPRD2 156473.2 10 11 172.1 488.65 HUMAN 1 7.5455 8.4303 IPLATGDTSPEPELL-p O75821;T41-p IPLATGDTSPEPELL 0.702689989895341 0.657054009790675 0.0523333333333333 0.0456666666666667 2.88060751776824 2.49288489813504 0.0523333333333333 0.0456666666666667 0.515156576278466 0.563263371246332 0.696056230633148 0.61530709833139 O75821 EIF3G O75821.T41.p_EIF3G O75821_T41tS42s_2_2_41_42 O75821 O75821|K7EL60 Eukaryotic translation initiation factor 3 subunit G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33708.34306.3 20.18 16.9 2.177 3 2 2 0 1028.203 2922.6592 T41t S42s TMT10 33 (K) GIPLATGDtsPEPELLPGAPLPPPK (E) GIPLAT(0.0)GDT(0.99)S(0.99)PEPELLPGAPLPPPK K:TMT10,t:Phosphorylated T,s:Phosphorylated S EIF3G 35895.6 10 6 2001.1 103.32 HUMAN 1 2.8806 2.4929 IPLFVKASKRFEESK-p Q8N412;S423-p IPLFVKASKRFEESK 0.186631283974087 0.0977373280802448 -0.272333333333333 -0.240666666666667 14.3302044100059 13.3537337085274 -0.272333333333333 -0.240666666666667 0.036896023225736 0.0461983674865962 -2.75374872529369 -2.57354932462152 Q8N412 STPG2 Q8N412.S423.p_STPG2 Q8N412_S413sS423s_2_2_413_423 Q8N412 Q8N412 Sperm-tail PG-rich repeat-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16844.16844.4 7.08 0.28 7.08 4 2 2 0 1205.6689 4658.6903 N407n S413s S423s TMT10 393 (R) CLEKVTDGPGPAAYnPVLRKsCPIPLFVKAsK (R) CLEKVT(0.0)DGPGPAAY(0.0)N(1.0)PVLRKS(0.99)CPIPLFVKAS(0.99)K C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S STPG2 51115.5 2 1 6229.1 12.99 HUMAN 1 -14.3302 -13.3537 IPLRPRESLETENVL-p I6L8A6;S593-p IPLRPRESLETENVL 0.128918631797654 0.0618171480576541 -0.326333333333333 -0.335333333333333 18.4217741360641 16.0939604106887 -0.326333333333333 -0.335333333333333 0.0143821093479323 0.0245812497270334 -3.54813285967531 -3.08405744573685 I6L8A6 NotFound I6L8A6.S593.p_NotFound I6L8A6_S593s _1_1_593_593 I6L8A6 Q99708-2|I6L8A6|Q99708-3 DNA endonuclease RBBP8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23669.23669.4 10.46 6.02 2.42 2 1 1 0 694.6326 2695.5395 S593s TMT10 586 (K) IPLRPREsLETENVLDDIK (S) IPLRPRES(0.99)LET(0.0)ENVLDDIK K:TMT10,s:Phosphorylated S RBBP8 103921.2 1 11 258.1 398.22 HUMAN 1 -18.4218 -16.094 IPMPDSPSPLSAAFS-p Q8TD19;S829-p IPMPDSPSPLSAAFS 0.101232831243026 0.0178381412256937 -0.439333333333333 0.341333333333333 21.0200425949415 24.0807021887069 -0.439333333333333 0.341333333333333 0.00790670873182256 0.00390777707819932 -4.10136314562031 4.80893540648099 Q8TD19 NEK9 Q8TD19.S829.p_NEK9 Q8TD19_S829s _1_1_829_829 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33605.33605.4 23.49 21.01 1.214 5 1 1 0 840.9083 3280.6335 S829s TMT10 815 (K) ELENAEFIPMPDSPsPLSAAFSESEK (D) ELENAEFIPMPDS(0.0)PS(0.99)PLS(0.0)AAFS(0.0)ES(0.0)EK K:TMT10,s:Phosphorylated S NEK9 108935.2 2 12 224.1 425.83 HUMAN 1 -21.02 24.0807 IPPAAPLSGRRRRPT-p Q9H4A3-7;S2534-p IPPAAPLSGRRRRPT 0.943819230463566 0.425631506041373 0.0116666666666667 -0.087 0.495309982012388 4.9366359127721 0.0116666666666667 -0.087 0.892213934656762 0.32087538940195 0.142004420038979 -1.0922150197661 Q9H4A3 WNK1 Q9H4A3.7.S2534.p_WNK1 Q9H4A3-7_S2534s _1_1_2534_2534 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2|F5GWT4|Q9H4A3-4 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22532.22532.4 17.17 17.17 99 1 1 1 0 637.6378 2467.5641 S2534s TMT10 2518 (K) LGKVPPAVIIPPAAPLsGRR (R) LGKVPPAVIIPPAAPLS(1.0)GRR K:TMT10,s:Phosphorylated S WNK1 301202.7 4 21 162.1 495.27 HUMAN 1 0.4953 -4.9366 IPPEPPRTPPFPAKT-p Q8IZ21;T358-p IPPEPPRTPPFPAKT 0.659007682953711 0.29495226677677 0.0646666666666667 0.128 3.39749751302006 6.99979517340748 0.0646666666666667 0.128 0.457351648376217 0.199535641987597 0.800054179829455 1.46057384822346 Q8IZ21 PHACTR4 Q8IZ21.T358.p_PHACTR4 Q8IZ21_S344sT358t_2_2_344_358 Q8IZ21 Q8IZ21-2|Q8IZ21-3 Phosphatase and actin regulator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22878.23500.4 17.21 17.21 1.159 4 2 2 0 769.6524 2915.6548 S344s T358t TMT10 342 (R) SPsPPLPTHIPPEPPRtPPFPAK (T) S(0.0)PS(0.99)PPLPT(0.0)HIPPEPPRT(0.99)PPFPAK K:TMT10,s:Phosphorylated S,t:Phosphorylated T PHACTR4 78438 20 21 350.1 351.04 HUMAN 1 3.3975 6.9998 IPPKMWKTSPDPSPV-p Q13469;T325-p IPPKMWKTSPDPSPV 0.0412311366109555 0.229414473837177 -0.498333333333333 -0.194333333333333 30.8954797260142 8.42347590394865 -0.498333333333333 -0.194333333333333 0.000813676976244564 0.14376474872197 -6.70927008551531 -1.70798290911458 Q13469 NFATC2 Q13469.T325.p_NFATC2 Q13469_T325t_1_1_325_325 Q13469 Q13469|Q13469-2|Q13469-4|Q13469-3|Q13469-5 Nuclear factor of activated T-cells, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15276.15276.4 10.41 7.49 1.177 5 1 1 0 643.0879 2473.3728 M322m T325t TMT10 322 (K) mWKtSPDPSPVSAAPSK (A) M(1.0)WKT(0.99)S(0.0)PDPS(0.0)PVS(0.0)AAPS(0.0)K K:TMT10,m:Oxidized methionine,t:Phosphorylated T NFATC2 101056.9 7 6 843.1 214.04 HUMAN 1 -30.8955 -8.4235 IPPRHQQSPKRTPLS-p Q8NEV8;S362-p IPPRHQQSPKRTPLS 0.549764101123738 0.0175936501308428 -0.0963333333333333 -0.435333333333333 4.79485212389523 24.1820430730371 -0.0963333333333334 -0.435333333333333 0.331523857917993 0.00381764633162599 -1.06632601363413 -4.83377460195209 Q8NEV8 EXPH5 Q8NEV8.S362.p_EXPH5 Q8NEV8_S362s _1_1_362_362 Q8NEV8 Q8NEV8 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.2555.2555.3 7.27 7.27 99 1 1 1 0 473.5938 1338.8006 S362s TMT10 359 (R) HQQsPKR (T) HQQS(1.0)PKR K:TMT10,s:Phosphorylated S EXPH5 223884.5 2 3 129.1 537.25 HUMAN 1 -4.7949 -24.182 IPRPPAGSPKGCFAC-p A0A1B0GU03;S398-p IPRPPAGSPKGCFAC 0.193217931232135 0.0801080265295218 -0.273333333333333 -0.201666666666667 13.9343360225146 14.5479629876083 -0.273333333333333 -0.201666666666667 0.0404172162243652 0.035091642900235 -2.68087037215082 -2.79233818952547 A0A1B0GU03 NotFound A0A1B0GU03.S398.p_NotFound A0A1B0GU03_S398s _1_1_398_398 A0A1B0GU03 A0A1B0GU03|A0A1B0GU92|A6NMD0 Uncharacterized protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.30048.30048.4 18.18 18.18 99 1 1 1 0 611.589 2363.364 S398s TMT10 383 (R) VPLDGAFWIPRPPAGsPK (G) VPLDGAFWIPRPPAGS(1.0)PK K:TMT10,s:Phosphorylated S 63727.8 2 3 3468.1 50.24 HUMAN 1 -13.9343 -14.548 IPRRRVNSGDTEVGS-p O75592;S3467-p IPRRRVNSGDTEVGS 0.324116103971983 0.0511772686384942 -0.143 -0.469666666666667 9.16571224036572 17.2330225265052 -0.143 -0.469666666666667 0.121179393899312 0.0189102707673382 -1.83705235116852 -3.30610990306613 O75592 MYCBP2 O75592.S3467.p_MYCBP2 O75592_S3467s _1_1_3467_3467 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12669.12669.3 9.7 9.7 1.246 4 1 1 0 633.6563 1818.9871 S3467s TMT10 3464 (R) RVNsGDTEVGSSLLR (H) RVNS(0.99)GDT(0.0)EVGS(0.0)S(0.0)LLR s:Phosphorylated S MYCBP2 518176.7 1 22 252.1 405.77 HUMAN 1 -9.1657 -17.233 IPSKYDWSGAEESDD-p P29375;S1598-p IPSKYDWSGAEESDD 0.25414491835742 0.226163824404371 0.189333333333333 0.152 11.3272898954254 8.5023745574813 0.189333333333333 0.152 0.073666665223509 0.141176543377641 2.21355023098597 1.72163552385221 P29375 KDM5A P29375.S1598.p_KDM5A P29375_S1598sS1603s_2_2_1598_1603 P29375 P29375|P29375-2 Lysine-specific demethylase 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24129.24129.5 23.45 21.05 4.452 4 2 2 0 932.8211 4500.1473 S1598s S1603s TMT10 1588 (K) VLDIPSKYDWsGAEEsDDENAVCAAQNCQRPCK (D) VLDIPS(0.0)KY(0.0)DWS(0.99)GAEES(0.99)DDENAVCAAQNCQRPCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S KDM5A 194944.7 7 11 446.1 309.57 HUMAN 1 11.3273 8.5024 IPSRTSHSDSSIYLR-p Q96JQ2;S907-p IPSRTSHSDSSIYLR 0.352523805432325 0.119203918876495 0.149666666666667 0.163333333333333 8.4100376961429 12.1822774847869 0.149666666666667 0.163333333333333 0.14421028342232 0.0605023511014915 1.70622741663137 2.36350741744644 Q96JQ2 CLMN Q96JQ2.S907.p_CLMN Q96JQ2_S907s _1_1_907_907 Q96JQ2 Q96JQ2 Calmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8179.8179.3 13.55 13.55 2.656 6 1 1 0 525.5851 1494.775 S907s TMT10 904 (R) TSHsDSSIYLR (R) T(0.0)S(0.0)HS(0.99)DS(0.0)S(0.0)IY(0.0)LR s:Phosphorylated S CLMN 112105.2 2 14 726.1 236.61 HUMAN 1 8.41 12.1823 IPSSCPRSFAELLHQ-p Q9NYL2;S234-p IPSSCPRSFAELLHQ 0.215386959262723 0.0287769059904504 -0.211333333333333 0.333333333333333 12.8464269144757 20.86490224685 -0.211333333333333 0.333333333333333 0.0519227048654592 0.00819426067019905 -2.4834303539817 4.06306202350021 Q9NYL2 ZAK Q9NYL2.S234.p_ZAK Q9NYL2_S234s _1_1_234_234 Q9NYL2 Q9NYL2|Q9NYL2-2 Mitogen-activated protein kinase kinase kinase 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35602.35602.3 9.8 1.85 99 1 1 1 0 781.7203 2263.1582 S234s TMT10 234 (R) sFAELLHQCWEADAK (K) S(1.0)FAELLHQCWEADAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP3K20 91781 1 1 1239.1 162.96 HUMAN 1 -12.8464 20.8649 IPSSGAASPRGFPLG-p Q9P270;S63-p IPSSGAASPRGFPLG 0.420944975696746 0.594645872067399 0.154666666666667 -0.0606666666666667 6.93127324147059 3.05642769824252 0.154666666666667 -0.0606666666666667 0.202708834141533 0.494717450934262 1.44897751423651 -0.731746461739558 Q9P270 SLAIN2 Q9P270.S63.p_SLAIN2 Q9P270_S63s _1_1_63_63 Q9P270 Q9P270 SLAIN motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7853.7853.2 16.73 16.73 3.2 4 1 1 0 769.3826 1457.791 S63s TMT10 52 (R) AGASIPSSGAAsPR (G) AGAS(0.0)IPS(0.0)S(0.0)GAAS(0.99)PR s:Phosphorylated S SLAIN2 62770.5 2 3 277.1 389.63 HUMAN 1 6.9313 -3.0564 IPSSKTASLPGYGRN-p O14639;S655-p IPSSKTASLPGYGRN 0.648592155019236 0.876754986878946 0.062 0.0233333333333333 3.52412787492297 0.802656051159002 0.062 0.0233333333333333 0.444208855864505 0.831255237882398 0.824998274748991 0.223595401547877 O14639 ABLIM1 O14639.S655.p_ABLIM1 O14639_S655s _1_1_655_655 O14639 O14639|O14639-6|A0A0A0MRL6|O14639-2|F8W8M4|O14639-5|O14639-3|O14639-4|J3QSX6 Actin-binding LIM protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11061.11061.2 13.31 6.81 2.764 3 1 1 0 615.808 1150.6418 S655s TMT10 653 (K) TAsLPGYGR (N) T(0.0)AS(0.99)LPGY(0.0)GR s:Phosphorylated S ABLIM1 89568.8 4 10 435.1 313.2 HUMAN 1 3.5241 0.8027 IPTPQRKSPASKLDK-p F6QMI7;S5526-p IPTPQRKSPASKLDK 0.43606840550564 0.0260778447551308 -0.172666666666667 -0.410666666666667 6.63430405382654 21.5355972116072 -0.172666666666667 -0.410666666666667 0.217054900081355 0.00702166779997903 -1.39683564009072 -4.2121989560551 F6QMI7 DST F6QMI7.S5526.p_DST F6QMI7_S5526s _1_1_5526_5526 F6QMI7 Q03001|F8W9J4|F6QMI7|E9PHM6|Q03001-14|Q03001-8 Dystonin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10738.10738.3 8.16 1.03 2.591 2 1 1 0 538.3148 1532.9615 S5526s TMT10 5526 (K) sPASKLDK (S) S(0.99)PAS(0.0)KLDK K:TMT10,s:Phosphorylated S DST 636850.7 1 11 796.2 223.72 HUMAN 1 -6.6343 -21.5356 IPTSEPGSQ______-p Q9H7D0;S1869-p IPTSEPGSQ______ 0.820107195022017 0.246248786404223 -0.044 0.114 1.65976165147731 8.01953696165612 -0.044 0.114 0.68237614312834 0.157777948124326 -0.432062161519064 1.63802906661274 Q9H7D0 DOCK5 Q9H7D0.S1869.p_DOCK5 Q9H7D0_S1869s _1_1_1869_1869 Q9H7D0 Q9H7D0 Dedicator of cytokinesis protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10777.10777.2 9.29 9.29 5.227 4 1 1 0 684.8166 1288.6582 S1869s TMT10 1860 (K) SGIPTSEPGsQ (-) S(0.0)GIPT(0.0)S(0.0)EPGS(0.99)Q s:Phosphorylated S DOCK5 216331.8 1 14 828.1 217.17 HUMAN 1 -1.6598 8.0195 IPTVNRITPKTQGTN-p M0R2Z9;T276-p IPTVNRITPKTQGTN 0.399843082349158 0.00938586319899589 -0.146 -0.509333333333333 7.34713477829981 28.61778308685 -0.146 -0.509333333333333 0.184198683617158 0.00137474355181151 -1.52165087597062 -6.0133999995106 M0R2Z9 SUGP2 M0R2Z9.T276.p_SUGP2 M0R2Z9_T276t _1_1_276_276 M0R2Z9 M0R2Z9|Q8IX01|Q8IX01-3|Q8IX01-4|M0R3F6 SURP and G-patch domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13249.13249.4 8.43 8.43 3.921 2 1 1 0 509.3163 1954.278 T276t TMT10 268 (K) KIPTVNRItPK (T) KIPT(0.0)VNRIT(0.99)PK K:TMT10,t:Phosphorylated T SUGP2 122455.2 2 4 963.1 194.03 HUMAN 1 -7.3471 -28.6178 IPVEGPLSPSRGDFP-p O00512;S687-p IPVEGPLSPSRGDFP 0.89898957204769 0.226696972236466 0.0186666666666667 0.118666666666667 0.903669207552387 8.48851421944144 0.0186666666666667 0.118666666666667 0.812144073101942 0.141627822515037 0.249537193812676 1.71923731428622 O00512 BCL9 O00512.S687.p_BCL9 O00512_S687s _1_1_687_687 O00512 O00512 B-cell CLL/lymphoma 9 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21821.22032.3 14.01 8.44 1.334 2 1 1 0 745.4029 2154.2323 S687s TMT10 680 (R) IPVEGPLsPSRGDFPK (G) IPVEGPLS(0.99)PS(0.0)RGDFPK K:TMT10,s:Phosphorylated S BCL9 149515.8 8 10 313.1 369.9 HUMAN 1 0.9037 8.4885 IPVFHNGSTPTLGET-p Q9Y6M7-13;S441-p IPVFHNGSTPTLGET 0.243289281106883 0.0697146669156021 -0.186 -0.208 11.7433409531497 15.3810696835071 -0.186 -0.208 0.0669369476813711 0.0289663004904645 -2.28689145357723 -2.94824725657643 Q9Y6M7 SLC4A7 Q9Y6M7.13.S441.p_SLC4A7 Q9Y6M7-13_S441sT442t_2_2_441_442 Q9Y6M7-13 Q9Y6M7-7|Q9Y6M7-8|E9PFN4|Q9Y6M7-12|A0A0A0MST8|Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-9|Q9Y6M7-2|Q9Y6M7-3|Q9Y6M7-4|Q9Y6M7-5|Q9Y6M7-10|Q9Y6M7-14|Q9Y6M7-11 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17531.17531.3 18.03 18.03 1.569 4 2 2 0 847.7695 2381.3593 S441s T442t Hydrogen 433 (R) KIPVFHNGstPTLGETPK (E) KIPVFHNGS(0.99)T(0.99)PT(0.0)LGET(0.0)PK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T SLC4A7 128884.6 9 24 207.1 445.25 HUMAN 1 -11.7433 -15.3811 IPVKASPSPTDPVVP-p P11498;S523-p IPVKASPSPTDPVVP 0.968934064180308 0.0912971014250874 -0.006 0.193333333333333 0.269340170671001 13.7495572921164 -0.006 0.193333333333333 0.939866094811898 0.0421739492204615 -0.0790075969611656 2.64549816640767 P11498 PC P11498.S523.p_PC P11498_S523s _1_1_523_523 P11498 P11498 Pyruvate carboxylase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32938.32938.3 16.41 11.96 1.126 3 1 1 0 1049.2378 3065.7349 S523s TMT10 520 (K) ASPsPTDPVVPAVPIGPPPAGFRDILLR (E) AS(0.0)PS(0.99)PT(0.0)DPVVPAVPIGPPPAGFRDILLR s:Phosphorylated S PC 130372.9 2 4 3715.1 44.68 HUMAN 1 -0.2693 13.7496 IPVKIRLSPEPWTPE-p O95573;S683-p IPVKIRLSPEPWTPE 0.50958360590914 0.42443411899609 -0.0873333333333333 -0.079 5.4077064969361 4.95452988468201 -0.0873333333333334 -0.079 0.287891836610702 0.319556025926082 -1.17827550579069 -1.09549912258027 O95573 ACSL3 O95573.S683.p_ACSL3 O95573_S683s _1_1_683_683 O95573 O95573 Long-chain-fatty-acid--CoA ligase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31484.31484.4 18.71 17.59 3.397 4 1 1 0 699.6252 2715.5122 S683s TMT10 680 (K) IRLsPEPWTPETGLVTDAFK (L) IRLS(0.99)PEPWT(0.0)PET(0.0)GLVT(0.0)DAFK K:TMT10,s:Phosphorylated S ACSL3 81388.6 3 2 4459.1 31.07 HUMAN 1 -5.4077 -4.9545 IPVPLSHSTNGKSKP-p Q14687;S1007-p IPVPLSHSTNGKSKP 0.265419473261086 0.290432662704783 -0.226 -0.190666666666667 10.9211140471691 7.08604371152538 -0.226 -0.190666666666667 0.080888837745426 0.195612060976912 -2.14229482399229 -1.47565373847032 Q14687 GSE1 Q14687.S1007.p_GSE1 Q14687_S1007s_1_1_1007_1007 Q14687 Q14687|Q14687-3|Q14687-2 Genetic suppressor element 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17323.17323.3 13.12 13.12 1.193 3 1 1 0 635.3356 1823.0427 S1007s N1009n TMT10 999 (K) DIPVPLSHsTnGK (S) DIPVPLS(0.0)HS(0.99)T(0.0)N(1.0)GK K:TMT10,s:Phosphorylated S,n:Deamidated GSE1 136446.7 3 15 221.1 428.09 HUMAN 1 -10.9211 -7.086 IPVSDEDSDAMVDDP-p A6NHB5;S269-p IPVSDEDSDAMVDDP 0.807840650085328 0.0450606415184352 0.0466666666666667 0.246666666666667 1.78037422401412 18.0170766306178 0.0466666666666667 0.246666666666667 0.663685879278098 0.0157867356573181 0.459595656546547 3.46288372751337 A6NHB5 NotFound A6NHB5.S269.p_NotFound A6NHB5_S265sS269s_2_2_265_269 A6NHB5 A6NHB5|Q14202|Q14202-2|A6NHN7|A6NL54|Q14202-3 Zinc finger MYM-type protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23617.24243.5 27.44 26.51 3.14 5 2 2 0 1044.2803 5057.4363 S265s S269s TMT10 247 (R) RAEPPKPEVVDSTESIPVsDEDsDAMVDDPNDEDFVPFRPR (R) RAEPPKPEVVDS(0.0)T(0.0)ES(0.0)IPVS(0.99)DEDS(0.99)DAMVDDPNDEDFVPFRPR K:TMT10,s:Phosphorylated S ZMYM3 156426.3 15 14 331.1 357.99 HUMAN 2 1.7804 18.0171 IPVSPAPSPTRGIGK-p Q96E09;S147-p IPVSPAPSPTRGIGK 0.296967606021501 0.0200510267309114 0.208333333333333 0.435333333333333 9.93367550391474 23.2741556779288 0.208333333333333 0.435333333333333 0.101538898913061 0.00470526873065625 1.97018988716595 4.61429050459002 Q96E09 FAM122A Q96E09.S147.p_FAM122A Q96E09_S147s _1_1_147_147 Q96E09 Q96E09 Protein FAM122A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21220.21220.5 20.59 20.59 3.061 3 1 1 0 510.0917 2466.4597 S147s TMT10 136 (K) RIDFIPVSPAPsPTRGIGK (Q) RIDFIPVS(0.0)PAPS(0.99)PT(0.0)RGIGK K:TMT10,s:Phosphorylated S FAM122A 30813.8 5 6 509.1 287.77 HUMAN 1 9.9337 23.2742 IPWHMGHSIEEIPIF-p Q16630-2;S258-p IPWHMGHSIEEIPIF 0.502476748524749 0.027984794976675 -0.0916666666666667 0.328666666666667 5.51306991255714 21.0470285775161 -0.0916666666666667 0.328666666666667 0.280991387459392 0.00785773072985252 -1.19730548253449 4.10324580981668 Q16630 CPSF6 Q16630.2.S258.p_CPSF6 Q16630-2_S258s _1_1_258_258 Q16630-2 Q16630-2 Isoform 2 of Cleavage and polyadenylation specificity factor subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31923.31923.4 20.27 15.81 99 1 1 1 0 661.3543 2562.4307 S258s TMT10 251 (R) IPWHMGHsIEEIPIFGLK (A) IPWHMGHS(1.0)IEEIPIFGLK K:TMT10,s:Phosphorylated S CPSF6 63640.9 8 2 1308.1 155.75 HUMAN 1 -5.5131 21.047 IPYVLNPSKLMEKEI-p Q6DD88;S304-p IPYVLNPSKLMEKEI 0.397840397989355 0.0690232434101233 -0.191333333333333 0.393666666666667 7.38837046723051 15.4369907006979 -0.191333333333333 0.393666666666667 0.182458018153702 0.028595713019592 -1.52883864217564 2.9588178906231 Q6DD88 ATL3 Q6DD88.S304.p_ATL3 Q6DD88_S304s _1_1_304_304 Q6DD88 Q6DD88|F5H6I7 Atlastin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.34025.34025.3 11.06 11.06 3.945 2 1 1 0 751.0854 2171.284 S304s TMT10 291 (K) EQLQALIPYVLNPsK (L) EQLQALIPY(0.0)VLNPS(0.99)K K:TMT10,s:Phosphorylated S ATL3 60997.3 1 5 1880.1 109.36 HUMAN 1 -7.3884 15.437 IQCVRAMSDLQSLQN-p Q8TDM6;S200-p IQCVRAMSDLQSLQN 0.912604724527024 0.587347925786436 -0.02 0.054 0.775106497268798 3.12420132049258 -0.02 0.054 0.836545081827476 0.487057088069438 -0.216474215712692 0.745420902282461 Q8TDM6 DLG5 Q8TDM6.S200.p_DLG5 Q8TDM6_S200s _1_1_200_200 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18549.18549.3 16.87 16.87 1.136 3 1 1 0 813.0829 2357.2648 S200s TMT10 198 (R) AMsDLQSLQNQHTNALK (R) AMS(0.99)DLQS(0.0)LQNQHT(0.0)NALK K:TMT10,s:Phosphorylated S DLG5 215575.4 2 2 34.1 890.58 HUMAN 1 -0.7751 3.1242 IQDRFLNSFEELQAE-p Q14766-4;S1617-p IQDRFLNSFEELQAE 0.834117503246035 0.494619986621851 -0.041 0.0986666666666667 1.52045249530223 4.08795604449911 -0.041 0.0986666666666667 0.704619650191318 0.39012555144338 -0.399774026853669 0.933744851097895 Q14766 LTBP1 Q14766.4.S1617.p_LTBP1 Q14766-4_S1617s _1_1_1617_1617 Q14766-4 Q14766-4|Q14766-5|Q14766-2|E7EV71|Q14766-3|C9JD84 Isoform 4 of Latent-transforming growth factor beta-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.31626.31626.3 24.29 24.29 99 1 1 1 0 999.111 2915.3501 S1617s TMT10 1614 (R) FLNsFEELQAEECGILNGCENGR (C) FLNS(1.0)FEELQAEECGILNGCENGR C:Carbamidomethylation,s:Phosphorylated S LTBP1 195308 3 3 2995.1 63.79 HUMAN 1 -1.5205 4.088 IQDSKDSSLLESDMK-p O15381;S211-p IQDSKDSSLLESDMK 0.207892104417555 0.00107456139719538 -0.307666666666667 -1.11033333333333 13.1612397867356 50.1706600268763 -0.307666666666667 -1.11033333333333 0.0482920922226556 9.614661467269e-06 -2.54016247516475 -15.8085110996311 O15381 NVL O15381.S211.p_NVL O15381_S211s _1_1_211_211 O15381 O15381|O15381-2|E9PH71 Nuclear valosin-containing protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19917.19917.5 12.74 12.74 1.132 5 1 1 0 652.9573 3180.7843 S211s TMT10 199 (K) KPITEIQDSKDSsLLESDMK (R) KPIT(0.0)EIQDS(0.0)KDS(0.0)S(0.99)LLES(0.0)DMK K:TMT10,s:Phosphorylated S NVL 96076.2 3 4 2878.1 67.49 HUMAN 1 -13.1612 -50.1707 IQEHEQDSALREQLS-p Q9UL54;S486-p IQEHEQDSALREQLS 0.114688242267433 0.394303388799681 -0.521 0.108333333333333 19.580546142906 5.37251012008412 -0.521 0.108333333333333 0.0110140079522002 0.290234468255023 -3.78950371082111 1.17165358360218 Q9UL54 TAOK2 Q9UL54.S486.p_TAOK2 Q9UL54_S486s _1_1_486_486 Q9UL54 Q9UL54|Q9UL54-4|Q9UL54-3|Q9UL54-2 Serine/threonine-protein kinase TAO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14377.14377.3 18.81 18.81 4.54 3 1 1 0 933.1386 2717.4259 S486s TMT10 478 (R) QIQEHEQDsALREQLSGYK (R) QIQEHEQDS(0.99)ALREQLS(0.0)GY(0.0)K K:TMT10,s:Phosphorylated S TAOK2 139047.7 4 4 2238.99 92.22 HUMAN 1 -19.5805 5.3725 IQESSSPSPLSIKKC-p Q13137-4;S414-p IQESSSPSPLSIKKC 0.834327857608735 0.0105402839067407 -0.0373333333333333 -0.433666666666667 1.51741776650456 27.7336840094945 -0.0373333333333333 -0.433666666666667 0.705112190831268 0.00168512297203098 -0.399064599348863 -5.76291079251324 Q13137 CALCOCO2 Q13137.4.S414.p_CALCOCO2 Q13137-4_S414s _1_1_414_414 Q13137-4 Q13137-4|Q13137-3|Q13137-5 Isoform 4 of Calcium-binding and coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21997.21997.5 24.51 24.51 2.374 8 1 1 0 718.1812 3506.9098 S414s TMT10 394 (R) QNPGLAYGNPYSGIQESSSPsPLSIKK (C) QNPGLAY(0.0)GNPY(0.0)S(0.0)GIQES(0.0)S(0.0)S(0.0)PS(0.99)PLS(0.0)IKK K:TMT10,s:Phosphorylated S CALCOCO2 55986 4 6 1533.1 133.47 HUMAN 1 -1.5174 -27.7337 IQEYGAQSGGLEKLL-p A0A087X1U6;S1821-p IQEYGAQSGGLEKLL 0.319370286133767 0.264228100745281 0.147333333333333 -0.127 9.2808244215264 7.61448562817123 0.147333333333333 -0.127 0.118009659656618 0.173201415574469 1.85698646663064 -1.56773158132988 A0A087X1U6 EPPK1 A0A087X1U6.S1821.p_EPPK1 A0A087X1U6_S1821s _1_1_1821_1821 A0A087X1U6 A0A087X1U6|A0A075B730 Epiplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19910.19910.3 18.11 18.11 7.18 2 1 1 0 720.7042 2080.1327 S1821s TMT10 1812 (R) ELIQEYGAQsGGLEK (L) ELIQEY(0.0)GAQS(0.99)GGLEK K:TMT10,s:Phosphorylated S EPPK1 558101.4 1 6 680.1 245.5 HUMAN 1 9.2808 -7.6145 IQGKKADSVANQGTK-p Q9P2E9;S552-p IQGKKADSVANQGTK 0.251728832793614 0.526786848081086 -0.402 0.129666666666667 11.4247628783161 3.74038797782111 -0.402 0.129666666666667 0.0720317078962513 0.422630856769203 -2.23069883005242 0.867027450191173 Q9P2E9 RRBP1 Q9P2E9.S552.p_RRBP1 Q9P2E9_S552s _1_1_552_552 Q9P2E9 Q9P2E9|A0A0A0MRV0|Q9P2E9-2|A0A087WVV2 Ribosome-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6435.6435.3 10.97 10.97 3.863 2 1 1 0 629.3489 1806.0688 S552s TMT10 549 (K) KADsVANQGTK (V) KADS(0.99)VANQGT(0.0)K K:TMT10,s:Phosphorylated S RRBP1 152868.9 1 9 479.1 299.08 HUMAN 1 -11.4248 3.7404 IQHMRVHSGEKPFEC-p Q96NJ6;S164-p IQHMRVHSGEKPFEC 0.761476943047114 0.00665295747346147 0.0496666666666667 -0.625 2.26825324054598 31.2782442187506 0.0496666666666667 -0.625 0.593163850803429 0.000745033117679065 0.567421913340653 -6.81923867598157 Q96NJ6 ZFP3 Q96NJ6.S164.p_ZFP3 Q96NJ6_S164s _1_1_164_164 Q96NJ6 Q96NJ6 Zinc finger protein 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10311.10311.3 9.52 9.52 99 1 1 1 0 695.7009 2005.1144 S164s TMT10 162 (R) VHsGEKPFECK (E) VHS(1.0)GEKPFECK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZFP3 59315.2 1 122 240.8 415.72 HUMAN 1 2.2683 -31.2782 IQIQLTQSFEKEEKP-p Q15032-2;S67-p IQIQLTQSFEKEEKP 0.089386884103539 0.38412685509375 -0.563666666666667 0.0973333333333334 22.3387772846323 5.52269343063199 -0.563666666666667 0.0973333333333334 0.00583609390894487 0.28036942886022 -4.39983194772559 1.19877648733928 Q15032 R3HDM1 Q15032.2.S67.p_R3HDM1 Q15032-2_S67s _1_1_67_67 Q15032-2 Q15032-3|Q15032-4|Q15032-2 Isoform 2 of R3H domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25307.25307.3 9.08 9.08 1.116 2 1 1 0 625.0128 1793.0573 S67s TMT10 60 (K) IQIQLTQsFEK (E) IQIQLT(0.0)QS(0.99)FEK K:TMT10,s:Phosphorylated S R3HDM1 108331.2 1 12 761.2 230.16 HUMAN 1 -22.3388 5.5227 IQKAFQDTLPLLVEN-p O94986;T1101-p IQKAFQDTLPLLVEN 0.0763063636557029 0.0142168794767824 0.376333333333333 -0.402 23.9579545169687 25.6178798840938 0.376333333333333 -0.402 0.00401980094824067 0.00274291286588552 4.78460837569552 -5.19529401238948 O94986 CEP152 O94986.T1101.p_CEP152 O94986_T1101t _1_1_1101_1101 O94986 O94986|O94986-3|O94986-2|O94986-1 Centrosomal protein of 152 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33881.33881.3 14.91 12.27 99 1 1 1 0 875.4496 2544.375 T1101t TMT10 1097 (K) AFQDtLPLLVENADPEWK (K) AFQDT(1.0)LPLLVENADPEWK K:TMT10,t:Phosphorylated T CEP152 198019.2 1 5 1197.1 167.32 HUMAN 1 23.958 -25.6179 IQKGIVRSPCGSPTG-p Q13191;S521-p IQKGIVRSPCGSPTG 0.885538071886065 0.052051676915512 -0.025 0.305333333333333 1.04205140576838 17.1296345316088 -0.025 0.305333333333334 0.786674113544258 0.0193658492498513 -0.284393570522207 3.28568363187013 Q13191 CBLB Q13191.S521.p_CBLB Q13191_S521sS525s_2_2_521_525 Q13191 Q13191|Q13191-2|Q13191-3 E3 ubiquitin-protein ligase CBL-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10709.10709.3 10.21 10.21 1.705 4 2 2 0 706.6785 1958.0894 S521s S525s TMT10 517 (K) GIVRsPCGsPTGSPK (S) GIVRS(0.99)PCGS(0.99)PT(0.0)GS(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CBLB 110931.2 3 5 2170.1 94.64 HUMAN 1 -1.0421 17.1296 IQLRPGRSPEPDGPA-p J3KQR7;S854-p IQLRPGRSPEPDGPA 0.794698102682769 0.101989046461499 -0.0416666666666667 0.215333333333333 1.92718855492075 13.0963778466781 -0.0416666666666667 0.215333333333333 0.641624803859594 0.0490187480787318 -0.492616358614826 2.52704948305492 J3KQR7 NotFound J3KQR7.S854.p_NotFound J3KQR7_S854s _1_1_854_854 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22401.22401.4 20.35 20.35 99 1 1 1 0 679.1117 2633.4547 S854s TMT10 845 (R) MVIQLRPGRsPEPDGPAPAFLR (Q) MVIQLRPGRS(1.0)PEPDGPAPAFLR s:Phosphorylated S CEP170B 172326.6 11 19 51.1 746.11 HUMAN 1 -1.9272 13.0964 IQLSMQGSSRNISQD-p F5H211;S260-p IQLSMQGSSRNISQD 0.0771470259197701 0.850080353988164 0.369666666666667 0.022 23.8254448473922 0.990931998908945 0.369666666666667 0.022 0.00414434131418206 0.795988512411407 4.75231779519286 0.271575549521712 F5H211 NotFound F5H211.S260.p_NotFound F5H211_S260s _1_1_260_260 F5H211 F5H211|P54252-1|A0A087WXY4|P54252-5 Ataxin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15403.15403.3 10.42 10.42 1.122 3 1 1 0 496.2482 1406.7623 S260s TMT10 252 (R) AIQLSMQGsSR (N) AIQLS(0.0)MQGS(0.99)S(0.0)R s:Phosphorylated S ATXN3 42705 2 2 3674.1 45.57 HUMAN 1 23.8254 0.9909 IQMSNMGSNTKSLDN-p O60716-3;S895-p IQMSNMGSNTKSLDN 0.540250599713126 0.0979331140236025 -0.096 0.191 4.93466450233394 13.3407925354 -0.0960000000000001 0.191 0.321021078724344 0.0463362353941998 -1.09207131080527 2.57120593208636 O60716 CTNND1 O60716.3.S895.p_CTNND1 O60716-3_S895s _1_1_895_895 O60716-3 O60716|O60716-2|O60716-3|C9JZR2|O60716-5|O60716-9|O60716-10|O60716-11|O60716-13|O60716-27|O60716-29 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10168.10168.4 17.78 16.16 1.125 4 1 1 0 823.676 3211.7221 S895s TMT10 879 (K) SDKKPDREEIQMSNMGsNTK (S) S(0.0)DKKPDREEIQMS(0.0)NMGS(0.99)NT(0.0)K K:TMT10,s:Phosphorylated S CTNND1 105545.3 9 37 21.1 1014.17 HUMAN 1 -4.9347 13.3408 IQNHHEVSTEGEEEE-p Q9ULI0;S255-p IQNHHEVSTEGEEEE 0.476784104106263 0.00925477031703611 0.147666666666667 0.455666666666667 5.92104534315655 28.7229190608748 0.147666666666667 0.455666666666667 0.2557970111551 0.00134186274021199 1.27048568352105 6.04373784081957 Q9ULI0 ATAD2B Q9ULI0.S255.p_ATAD2B Q9ULI0_S255sT256tS263s_3_3_255_263 Q9ULI0 Q9ULI0|Q9ULI0-2 ATPase family AAA domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17034.17034.5 21.78 21.78 4.332 6 3 3 0 1112.8472 5320.302 S255s T256t S263s TMT10 244 (R) NSYGIQNHHEVstEGEEEEsQEEDGDIEVEEAEGEENDRPYNLR (Q) NS(0.0)Y(0.0)GIQNHHEVS(0.99)T(0.99)EGEEEES(0.99)QEEDGDIEVEEAEGEENDRPY(0.0)NLR s:Phosphorylated S,t:Phosphorylated T ATAD2B 166451.5 3 17 531.1 280.81 HUMAN 1 5.921 28.7229 IQNSPKLTPKMKKDK-p O15440;T513-p IQNSPKLTPKMKKDK 0.260386657049657 0.834743698929883 0.181 -0.0216666666666667 11.0779473093347 1.09949997657986 0.181 -0.0216666666666667 0.0780198783949144 0.776336494711868 2.16977069792614 -0.298624216997337 O15440 ABCC5 O15440.T513.p_ABCC5 O15440_S509sT513t_2_2_509_513 O15440 O15440|O15440-5 Multidrug resistance-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18043.18043.4 17.48 17.48 2.212 7 2 2 0 808.1617 3069.6936 S509s T513t TMT10 494 (K) NATLAWDSSHSSIQNsPKLtPK (M) NAT(0.0)LAWDS(0.0)S(0.0)HS(0.0)S(0.0)IQNS(0.99)PKLT(0.99)PK K:TMT10,s:Phosphorylated S,t:Phosphorylated T ABCC5 161741.5 9 10 1666.1 122.51 HUMAN 1 11.0779 -1.0995 IQPAAQKTPTSPLKM-p O60264;T113-p IQPAAQKTPTSPLKM 0.274714997766963 0.026452885612085 0.811333333333333 -1.40566666666667 10.6178022320406 21.4188875470989 0.811333333333333 -1.40566666666667 0.0867400716983903 0.00721292215782517 2.08927861888831 -4.18601708544067 O60264 SMARCA5 O60264.T113.p_SMARCA5 O60264_T113t_1_1_113_113 O60264 O60264 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29268.29268.4 14.08 14.08 1.431 4 1 1 0 744.3997 2911.6446 Q98q T113t Hydrogen 98 (K) qTELFAHFIQPAAQKtPTSPLK (M) Q(1.0)T(0.0)ELFAHFIQPAAQKT(0.99)PT(0.0)S(0.0)PLK K:TMT10-Lys-Only,q:Pyroglutamic acid,t:Phosphorylated T SMARCA5 122587.8 9 6 1232.1 163.75 HUMAN 1 10.6178 -21.4189 IQPHDDGSPRRGCSE-p Q9P2F8;S1029-p IQPHDDGSPRRGCSE 0.390796986935009 0.104801957629519 -0.119666666666667 -0.224 7.53969712336228 12.9441409073677 -0.119666666666667 -0.224 0.176209893077054 0.0507675154039523 -1.55519212074287 -2.49964185453391 Q9P2F8 SIPA1L2 Q9P2F8.S1029.p_SIPA1L2 Q9P2F8_S1029s _1_1_1029_1029 Q9P2F8 Q9P2F8|Q9P2F8-2 Signal-induced proliferation-associated 1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13316.13316.3 14.82 14.82 99 1 1 1 0 581.2993 1661.9172 S1029s TMT10 1019 (K) VVIIQPHDDGsPR (R) VVIIQPHDDGS(1.0)PR s:Phosphorylated S SIPA1L2 192488.1 2 6 322.1 363.46 HUMAN 1 -7.5397 -12.9441 IQPHGGGSNPLEGTQ-p Q14126;S999-p IQPHGGGSNPLEGTQ 0.518207869341824 0.319235970611467 0.105666666666667 0.211333333333333 5.27415054245191 6.55836100733012 0.105666666666667 0.211333333333333 0.296882737395899 0.220883817361781 1.15406867621078 1.38310462555071 Q14126 DSG2 Q14126.S999.p_DSG2 Q14126_S999s _1_1_999_999 Q14126 Q14126 Desmoglein-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22539.22539.4 21.68 21.68 1.139 3 1 1 0 810.158 3157.6414 S999s TMT10 991 (R) VIQPHGGGsNPLEGTQHLQDVPYVMVR (E) VIQPHGGGS(0.99)NPLEGT(0.0)QHLQDVPY(0.0)VMVR s:Phosphorylated S DSG2 123090.5 2 10 494.1 293.66 HUMAN 1 5.2742 6.5584 IQPLEPDSPTGLSEN-p Q9ULJ3;S1003-p IQPLEPDSPTGLSEN 0.659595024833796 0.0102155447521125 -0.0803333333333333 -0.400666666666667 3.38791171529669 27.9593994840848 -0.0803333333333333 -0.400666666666667 0.458362235070421 0.00159977922103288 -0.798157978597738 -5.82608631498266 Q9ULJ3 ZBTB21 Q9ULJ3.S1003.p_ZBTB21 Q9ULJ3_S1003s _1_1_1003_1003 Q9ULJ3 Q9ULJ3|Q9ULJ3-2 Zinc finger and BTB domain-containing protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21365.21365.2 22.86 22.86 1.181 5 1 1 0 1430.2266 2779.4766 S1003s TMT10 996 (K) IQPLEPDsPTGLSENPTPATEK (L) IQPLEPDS(0.99)PT(0.0)GLS(0.0)ENPT(0.0)PAT(0.0)EK K:TMT10,s:Phosphorylated S ZBTB21 120636.9 5 11 692.1 242.92 HUMAN 1 -3.3879 -27.9594 IQPSAQKSPTSPLNM-p B7ZLQ5;S116-p IQPSAQKSPTSPLNM 0.956686150793064 0.334343595116034 -0.00966666666666668 -0.102 0.377453484788119 6.30535994673269 -0.00966666666666669 -0.102 0.916757879769202 0.234133741521391 -0.109492450749365 -1.33845014837514 B7ZLQ5 SMARCA1 B7ZLQ5.S116.p_SMARCA1 B7ZLQ5_S116s _1_1_116_116 B7ZLQ5 B7ZLQ5|A0A0A0MRP6|P28370|P28370-2 Probable global transcription activator SNF2L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25500.25500.3 19.86 19.86 1.211 5 1 1 0 1156.6163 3387.8702 S116s TMT10 101 (K) QTELFAHFIQPSAQKsPTSPLNMK (L) Q(0.0)T(0.0)ELFAHFIQPS(0.0)AQKS(0.99)PT(0.0)S(0.0)PLN(0.0)M(0.0)K K:TMT10,s:Phosphorylated S SMARCA1 125009.1 21 1 1232.2 163.75 HUMAN 1 -0.3775 -6.3054 IQQETGGSVDILPLY-p O15085-2;S233-p IQQETGGSVDILPLY 0.235442260231975 0.649185296967532 0.176 0.0633333333333334 12.0360858085281 2.55987638328636 0.176 0.0633333333333334 0.0625736399842553 0.554641499938072 2.33873682236418 0.629426069208568 O15085 ARHGEF11 O15085.2.S233.p_ARHGEF11 O15085-2_S233s _1_1_233_233 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22489.22489.3 16.63 12.94 1.157 6 1 1 0 1038.1742 3032.5486 S233s TMT10 226 (K) IQQETGGsVDILPLYGDTSQRPSEGR (L) IQQET(0.0)GGS(0.99)VDILPLY(0.0)GDT(0.0)S(0.0)QRPS(0.0)EGR s:Phosphorylated S ARHGEF11 173153.4 1 3 228.1 424.05 HUMAN 1 12.0361 2.5599 IQQSSMKSPLYLVSR-p Q8WYP5-2;S1177-p IQQSSMKSPLYLVSR 0.989020433252707 0.764650992242412 0.00233333333333333 -0.0343333333333333 0.0991337686922634 1.60952824739056 0.00233333333333332 -0.0343333333333333 0.977432157326946 0.690314785247602 0.0296196446805252 -0.420435683410928 Q8WYP5 AHCTF1 Q8WYP5.2.S1177.p_AHCTF1 Q8WYP5-2_S1177s _1_1_1177_1177 Q8WYP5-2 Q8WYP5|Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23784.23784.3 13.91 8.54 1.117 7 1 1 0 1037.5272 3030.5793 S1177s TMT10 1163 (R) PSQCSEFIQQSSMKsPLYLVSR (S) PS(0.0)QCS(0.0)EFIQQS(0.0)S(0.0)MKS(0.99)PLY(0.0)LVS(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AHCTF1 258049.6 6 8 40.1 829.79 HUMAN 1 0.0991 -1.6095 IQRQAKKSFSTLFLE-p Q03188;S261-p IQRQAKKSFSTLFLE 0.886118944763575 0.00518016221808102 0.0313333333333333 -0.527666666666667 1.02487523682978 33.2467947211178 0.0313333333333333 -0.527666666666667 0.789791538032794 0.000473500593707936 0.28010653195156 -7.47054900414279 Q03188 CENPC Q03188.S261.p_CENPC Q03188_S261s _1_1_261_261 Q03188 Q03188|Q03188-2 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.34460.34460.2 8.29 8.29 1.142 4 1 1 0 905.4914 1730.014 S261s TMT10 261 (K) sFSTLFLETVK (R) S(0.99)FS(0.0)T(0.0)LFLET(0.0)VK K:TMT10,s:Phosphorylated S CENPC 107459.5 2 14 209.1 442.77 HUMAN 1 1.0249 -33.2468 IQRRYSPSPPPKRRT-p A9Z1X7;S616-p IQRRYSPSPPPKRRT 0.23390337267411 0.0164056285122958 0.204333333333333 0.431666666666667 12.0959567815098 24.6512562853591 0.204333333333333 0.431666666666667 0.0617169310139203 0.00342668648313341 2.34936626390019 4.9499234447944 A9Z1X7 NotFound A9Z1X7.S616.p_NotFound A9Z1X7_S616s _1_1_616_616 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7550.7758.3 10.7 8 1.438 3 1 1 0 522.9533 1486.8782 S616s TMT10 612 (R) RYSPsPPPK (R) RY(0.0)S(0.0)PS(0.99)PPPK K:TMT10,s:Phosphorylated S SRRM1 103445.7 4 28 8.1 1346.57 HUMAN 1 12.096 24.6513 IQSENSDSDSNMVEK-p Q6UB98-2;S17-p IQSENSDSDSNMVEK 0.175114346915946 0.268353223732572 0.284666666666667 -0.157333333333333 15.0718799962961 7.52315573601374 0.284666666666667 -0.157333333333333 0.0311036961283888 0.176882320226441 2.89194322953185 -1.55185185612944 Q6UB98 ANKRD12 Q6UB98.2.S17.p_ANKRD12 Q6UB98-2_S15sS17s_2_2_15_17 Q6UB98-2 Q6UB98|Q6UB98-2|J3KSU9 Isoform 2 of Ankyrin repeat domain-containing protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17569.17569.5 8.99 8.99 1.244 7 2 2 0 724.9479 3460.7622 S15s S17s TMT10 4 (K) SGFTKPIQSENsDsDSNMVEKPYGR (K) S(0.0)GFT(0.0)KPIQS(0.0)ENS(0.99)DS(0.99)DS(0.0)NMVEKPY(0.0)GR K:TMT10,s:Phosphorylated S ANKRD12 234548.2 1 16 480.1 298.87 HUMAN 1 15.0719 -7.5232 IQSKEDDSKA_____-p O15394;S835-p IQSKEDDSKA_____ 0.110882718430232 0.410508191881055 -0.364333333333333 -0.103333333333333 19.968723149376 5.14471769654291 -0.364333333333334 -0.103333333333333 0.0100722775604693 0.305863906006988 -3.87224123256399 -1.13027934716094 O15394 NCAM2 O15394.S835.p_NCAM2 O15394_S835s _1_1_835_835 O15394 O15394 Neural cell adhesion molecule 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14643.14643.3 13.87 13.87 3.771 3 1 1 0 806.092 2336.2912 S835s TMT10 823 (K) VSNDIIQSKEDDsKA (-) VS(0.0)NDIIQS(0.0)KEDDS(0.99)KA K:TMT10,s:Phosphorylated S NCAM2 93843.3 1 7 1267.1 160.16 HUMAN 1 -19.9687 -5.1447 IQSNLDFSPVNSASS-p E7EPP6;S317-p IQSNLDFSPVNSASS 0.289498276160622 0.00257185058433366 -0.168 -0.721 10.1514752976247 39.5471120705608 -0.168 -0.721 0.0965722767401559 0.00011099126288876 -2.00803961716171 -9.92951003830117 E7EPP6 CHEK1 E7EPP6.S317.p_CHEK1 E7EPP6_S317s _1_1_317_317 E7EPP6 E7EPP6|O14757|O14757-3|J3KN87|O14757-2 Serine/threonine-protein kinase Chk1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17749.17749.3 20.5 20.5 2.628 5 1 1 0 947.468 2760.4205 S317s TMT10 309 (K) HIQSNLDFsPVNSASSEENVK (Y) HIQS(0.0)NLDFS(0.99)PVNS(0.0)AS(0.0)S(0.0)EENVK K:TMT10,s:Phosphorylated S CHEK1 56201.4 4 3 3241.1 56.14 HUMAN 1 -10.1515 -39.5471 IQSRPLPSPPKFTSQ-p P56945-6;S685-p IQSRPLPSPPKFTSQ 0.43773303002828 0.0799587703347656 0.145666666666667 0.201666666666667 6.60806311784224 14.5592875873859 0.145666666666667 0.201666666666667 0.218370359068954 0.0350002576415454 1.39221678915734 2.79443844383715 P56945 BCAR1 P56945.6.S685.p_BCAR1 P56945-6_S685s _1_1_685_685 P56945-6 P56945-6|P56945-2|P56945-3 Isoform 6 of Breast cancer anti-estrogen resistance protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13260.13260.3 11.82 8.26 4.217 5 1 1 0 678.3785 1953.1533 S685s TMT10 675 (K) TSSIQSRPLPsPPK (F) T(0.0)S(0.0)S(0.0)IQS(0.0)RPLPS(0.99)PPK K:TMT10,s:Phosphorylated S BCAR1 98217.4 2 6 1150.1 172.39 HUMAN 1 6.6081 14.5593 IQVGGRNSFGAKDGN-p P09960-2;S525-p IQVGGRNSFGAKDGN 0.0219445476003805 0.00576750238972879 -0.703333333333333 -0.529 38.4691266249195 32.3809143168952 -0.703333333333333 -0.529 0.000142261484911213 0.000577974354091594 -9.48449130809044 -7.17794518778645 P09960 LTA4H P09960.2.S525.p_LTA4H P09960-2_S525s _1_1_525_525 P09960-2 P09960-2|P09960-3 Isoform 2 of Leukotriene A-4 hydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18395.18395.4 10.72 10.72 1.493 2 1 1 0 614.0778 2373.3225 S525s TMT10 511 (R) MAAALHSIQVGGRNsFGAK (D) MAAALHS(0.0)IQVGGRNS(0.99)FGAK K:TMT10,s:Phosphorylated S LTA4H 60302.4 1 1 6595.1 10.72 HUMAN 1 -38.4691 -32.3809 IQVKQIQTPPDAGKL-p Q5VWG9;T364-p IQVKQIQTPPDAGKL 0.575281775131801 0.630256552090623 -0.092 0.07 4.41558617137231 2.7260490592324 -0.092 0.07 0.361777358004615 0.533820311132545 -0.995781392278381 0.664110055655286 Q5VWG9 TAF3 Q5VWG9.T364.p_TAF3 Q5VWG9_T364t _1_1_364_364 Q5VWG9 Q5VWG9 Transcription initiation factor TFIID subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13281.13281.3 13.5 9.42 3.323 2 1 1 0 911.4886 2652.4924 T364t TMT10 361 (K) QIQtPPDAGKLNSENQPK (K) QIQT(0.99)PPDAGKLNS(0.0)ENQPK K:TMT10,t:Phosphorylated T TAF3 104321.6 3 9 699.1 240.69 HUMAN 1 -4.4156 2.726 IQWSEEETEDEEEEK-p P46087-4;T218-p IQWSEEETEDEEEEK 0.107580441960944 0.0386745972221711 -0.573 0.538666666666667 20.3900085345925 18.9706069045279 -0.573 0.538666666666667 0.00914111445090908 0.0126747473031138 -3.9631548331831 3.65823062758026 P46087 NOP2 P46087.4.T218.p_NOP2 P46087-4_S214sT218t_2_2_214_218 P46087-4 P46087-4|P46087-2|P46087-3 Isoform 4 of Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19654.19654.3 17.19 17.19 99 2 2 2 0 976.4103 2767.2834 S214s T218t TMT10 206 (R) EAAAGIQWsEEEtEDEEEEK (E) EAAAGIQWS(1.0)EEET(1.0)EDEEEEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T NOP2 93257.6 2 6 1090.1 179.08 HUMAN 1 -20.39 18.9706 IRALLRLSQECEKLK-p P34932;S267-p IRALLRLSQECEKLK 0.556318909489347 0.438378499214883 0.084 0.0813333333333333 4.70199087344948 4.77219223122579 0.084 0.0813333333333334 0.338688860305826 0.333258148285749 1.04915203726114 1.06193443414152 P34932 HSPA4 P34932.S267.p_HSPA4 P34932_S267s _1_1_267_267 P34932 P34932|A0A087WYC1|A0A087WTS8 Heat shock 70 kDa protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16588.16588.3 12.33 12.33 99 1 1 1 0 629.0062 1805.0355 S267s TMT10 262 (R) ALLRLsQECEK (L) ALLRLS(1.0)QECEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HSPA4 95185.1 1 7 549.1 274.67 HUMAN 1 4.702 4.7722 IRANRADSEEEGTVE-p O14576;S635-p IRANRADSEEEGTVE 0.361082685893224 0.0128335630021394 0.185333333333333 0.420333333333333 8.22575663986419 26.3499880031562 0.185333333333333 0.420333333333334 0.150461135841159 0.00231740105149124 1.67430230000894 5.38681384606917 O14576 DYNC1I1 O14576.S635.p_DYNC1I1 O14576_S635s _1_1_635_635 O14576 O14576|O14576-2|O14576-5|O14576-3 Cytoplasmic dynein 1 intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11695.11695.2 12 12 1.434 3 1 1 0 993.9457 1906.9191 S635s TMT10 630 (R) ANRADsEEEGTVELSA (-) ANRADS(0.99)EEEGT(0.0)VELS(0.0)A s:Phosphorylated S DYNC1I1 73467.5 1 1 6372.1 12 HUMAN 1 8.2258 26.35 IRCTVSMSLPKQLKL-p Q6ZV73;S454-p IRCTVSMSLPKQLKL 0.487771326842487 0.0176244219751991 -0.133666666666667 -0.376 5.7454051934126 24.162021731622 -0.133666666666667 -0.376 0.266354157879243 0.00383528663316476 -1.23907377596613 -4.82886038088159 Q6ZV73 FGD6 Q6ZV73.S454.p_FGD6 Q6ZV73_S454s _1_1_454_454 Q6ZV73 Q6ZV73|Q6ZV73-2|F8VY01 FYVE, RhoGEF and PH domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18845.18845.2 11.83 7.91 2.276 3 1 1 0 780.9036 1480.8268 S454s TMT10 449 (R) CTVSMsLPK (Q) CT(0.0)VS(0.0)MS(0.99)LPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FGD6 162696.3 2 5 630.1 257.05 HUMAN 1 -5.7454 -24.162 IRDELDVSNFAEEFT-p O75582;S346-p IRDELDVSNFAEEFT 0.290027496028783 0.00629581492447273 0.175333333333333 0.623 10.1354497432141 31.6922319722647 0.175333333333333 0.623 0.096929288684336 0.000677293336375297 2.00525284601246 6.95212890792244 O75582 RPS6KA5 O75582.S346.p_RPS6KA5 O75582_S346s _1_1_346_346 O75582 O75582|O75582-3|O75582-2 Ribosomal protein S6 kinase alpha-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.33077.33077.5 30.15 25.81 5.499 7 1 1 0 1116.1838 5496.9059 S346s TMT10 330 (K) KVPAPFKPVIRDELDVsNFAEEFTEMDPTYSPAALPQSSEK (L) KVPAPFKPVIRDELDVS(0.99)NFAEEFT(0.0)EMDPT(0.0)Y(0.0)S(0.0)PAALPQS(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S RPS6KA5 90434.3 2 1 2444.1 83.26 HUMAN 1 10.1354 31.6922 IRDRFAESPHHVGQS-p P48552;S218-p IRDRFAESPHHVGQS 0.550208751774628 0.00825803939985841 0.0853333333333333 0.519666666666667 4.7871474807998 29.6358963272899 0.0853333333333333 0.519666666666667 0.332112523021087 0.00108745267838877 1.06490340381303 6.31225880386968 P48552 NRIP1 P48552.S218.p_NRIP1 P48552_S218s _1_1_218_218 P48552 P48552 Nuclear receptor-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6711.6711.4 12.86 12.86 5.112 3 1 1 0 505.7581 1940.039 S218s TMT10 215 (R) FAEsPHHVGQSGTK (V) FAES(0.99)PHHVGQS(0.0)GT(0.0)K K:TMT10,s:Phosphorylated S NRIP1 127738.5 1 1 807.1 221.77 HUMAN 1 4.7871 29.6359 IRDSGNNSGDQATEE-p Q96RS0;S55-p IRDSGNNSGDQATEE 0.912869099045042 0.0907147942259609 -0.04 0.355333333333333 0.772092302965377 13.790188015842 -0.04 0.355333333333333 0.83712588235497 0.0417812278222518 -0.215690781179786 2.65291426752628 Q96RS0 TGS1 Q96RS0.S55.p_TGS1 Q96RS0_S55s _1_1_55_55 Q96RS0 Q96RS0 Trimethylguanosine synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7180.7180.4 27.97 27.97 1.32 8 1 1 0 889.864 3476.4668 S55s TMT10 50 (R) DSGNNsGDQATEEEEGGYSCGTAESHDSK (G) DS(0.0)GNNS(0.99)GDQAT(0.0)EEEEGGY(0.0)S(0.0)CGT(0.0)AES(0.0)HDS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TGS1 97473.9 2 1 1387.1 147.41 HUMAN 1 -0.7721 13.7902 IRDVLRRSSELLVRK-p Q9NSK0-3;S583-p IRDVLRRSSELLVRK 0.745340437858944 0.00526403465745255 0.046 0.704 2.4225058949835 33.1122421015171 0.046 0.704 0.57246562092212 0.000488400151341226 0.600461434047817 7.42443090711443 Q9NSK0 KLC4 Q9NSK0.3.S583.p_KLC4 Q9NSK0-3_S583s _1_1_583_583 Q9NSK0-3 Q9NSK0-3|Q9NSK0-5 Isoform 3 of Kinesin light chain 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9507.9507.2 11.59 7.58 2 2 1 1 0 620.8472 1160.72 S583s Hydrogen 583 (R) sSELLVRK (L) S(0.99)S(0.0)ELLVRK K:TMT10-Lys-Only,s:Phosphorylated S KLC4 71007 9 4 1761.1 117.07 HUMAN 1 2.4225 33.1122 IREELVSSDELRQDK-p Q8N573-2;S347-p IREELVSSDELRQDK 0.711199649366842 0.0161232511092333 0.0806666666666667 0.566333333333333 2.78280795865722 24.7614095324696 0.0806666666666667 0.566333333333333 0.526889087771607 0.00334086592337894 0.67594201709018 4.97746648814008 Q8N573 OXR1 Q8N573.2.S347.p_OXR1 Q8N573-2_S346sS347s_2_2_346_347 Q8N573-2 Q8N573|Q8N573-8|Q8N573-5|Q8N573-2|Q8N573-3 Isoform 2 of Oxidation resistance protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17085.17085.3 7.02 7.02 99 2 2 2 0 722.6765 2006.0806 S346s S347s TMT10 342 (R) EELVssDELRQDK (S) EELVS(1.0)S(1.0)DELRQDK K:TMT10,s:Phosphorylated S OXR1 94303 1 12 1415.1 144.6 HUMAN 1 2.7828 24.7614 IREERTLTPISGGQR-p Q13415;T337-p IREERTLTPISGGQR 0.152460459216563 0.00867914906862355 0.256666666666667 -0.618666666666667 16.4240867975192 29.2417257090481 0.256666666666667 -0.618666666666667 0.0227819723404731 0.00119076875109723 3.15004881703483 -6.19519914836879 Q13415 ORC1 Q13415.T337.p_ORC1 Q13415_T337t _1_1_337_337 Q13415 Q13415 Origin recognition complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10434.10434.2 10.49 6.92 1.794 3 1 1 0 669.853 1258.7317 T337t TMT10 335 (R) TLtPISGGQR (S) T(0.0)LT(0.99)PIS(0.0)GGQR t:Phosphorylated T ORC1 98432 1 7 939.1 198.15 HUMAN 1 16.4241 -29.2417 IRESKRNSRLGFLYD-p Q6ZS17-4;S130-p IRESKRNSRLGFLYD 0.812937085947395 0.17601998354481 -0.062 -0.245 1.72977750571134 9.92096437186034 -0.062 -0.245 0.671463251915118 0.101836523003036 -0.448091416655492 -1.96719403802434 Q6ZS17 FAM65A Q6ZS17.4.S130.p_FAM65A Q6ZS17-4_S130s _1_1_130_130 Q6ZS17-4 Q6ZS17-4|A0A0A0MTL6|Q6ZS17-3|Q6ZS17-2 Isoform 4 of Rho family-interacting cell polarization regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20412.20412.3 9.05 5.28 8.028 2 1 1 0 712.3833 2055.1751 S130s TMT10 128 (K) RNsRLGFLYDLDK (Q) RNS(0.99)RLGFLY(0.0)DLDK K:TMT10,s:Phosphorylated S RIPOR1 135393.6 1 2 1530.1 133.82 HUMAN 1 -1.7298 -9.921 IREVRADSVGKLVTV-p P33993;S156-p IREVRADSVGKLVTV 0.184234271280265 0.00129606731851265 0.426666666666667 -1.09833333333333 14.442612107771 47.2714124630333 0.426666666666667 -1.09833333333333 0.035953302536307 1.87438479969624e-05 2.77455154584825 -13.9406075521195 P33993 MCM7 P33993.S156.p_MCM7 P33993_S156s _1_1_156_156 P33993 P33993|P33993-2 DNA replication licensing factor MCM7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15784.15784.3 11.04 11.04 2.419 2 1 1 0 561.6588 1602.9943 S156s TMT10 154 (R) ADsVGKLVTVR (G) ADS(0.99)VGKLVT(0.0)VR K:TMT10,s:Phosphorylated S MCM7 81934.1 4 2 1064.1 181.73 HUMAN 1 14.4426 -47.2714 IRFFPLESWQIGKIG-p J3KQ18;S119-p IRFFPLESWQIGKIG 0.409041787828506 0.0920703006730312 -0.126666666666667 0.229666666666667 7.15713256275065 13.7019901900689 -0.126666666666667 0.229666666666667 0.192436187299812 0.0426384080023926 -1.48849137935812 2.63682339350182 J3KQ18 NotFound J3KQ18.S119.p_NotFound J3KQ18_S119s _1_1_119_119 J3KQ18 J3KQ18|P30046 D-dopachrome decarboxylase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.35065.35065.3 9.85 9.85 99 1 1 1 0 630.6704 1810.0304 S119s TMT10 114 (R) FFPLEsWQIGK (I) FFPLES(1.0)WQIGK K:TMT10,s:Phosphorylated S DDT 14306.5 1 1 6741.1 9.85 HUMAN 1 -7.1571 13.702 IRFGRKPSLIGLDPE-p Q8TCU6;S1001-p IRFGRKPSLIGLDPE 0.228515015675621 0.118376515000381 0.190666666666667 0.258666666666667 12.3210196224129 12.2196550777643 0.190666666666667 0.258666666666667 0.0586000569061157 0.0599838714322128 2.38940737417174 2.37014876830952 Q8TCU6 PREX1 Q8TCU6.S1001.p_PREX1 Q8TCU6_S1001s _1_1_1001_1001 Q8TCU6 Q8TCU6|Q8TCU6-3|Q8TCU6-2 Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26688.26688.5 13.39 13.39 5.509 7 1 1 0 896.0573 4396.2859 S1001s TMT10 999 (R) KPsLIGLDPEQGHLNPMSYTQHCITTMAAPSWK (C) KPS(0.99)LIGLDPEQGHLNPMS(0.0)Y(0.0)T(0.0)QHCIT(0.0)T(0.0)MAAPS(0.0)WK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PREX1 188881.6 4 7 379.1 336 HUMAN 1 12.321 12.2197 IRFNRSKSLAFHTML-p Q14D04;S449-p IRFNRSKSLAFHTML 0.120014369208718 0.0155209282366236 -0.57 0.477333333333333 19.152114170507 25.0113128224106 -0.57 0.477333333333333 0.0121559409839137 0.00315405104579605 -3.69930134745515 5.04034783748236 Q14D04 VEPH1 Q14D04.S449.p_VEPH1 Q14D04_S449s _1_1_449_449 Q14D04 Q14D04|Q14D04-2 Ventricular zone-expressed PH domain-containing protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21656.21656.3 14.64 14.64 7.534 3 1 1 0 562.9734 1606.9391 S449s TMT10 449 (K) sLAFHTMLTK (G) S(0.99)LAFHT(0.0)MLT(0.0)K K:TMT10,s:Phosphorylated S VEPH1 95542.4 10 7 341.1 353.64 HUMAN 1 -19.1521 25.0113 IRGHDEGSSLEEPLI-p B4DWF2;S84-p IRGHDEGSSLEEPLI 0.848604997500027 0.370544372074828 -0.031 0.174 1.37781882838986 5.71895683054514 -0.031 0.174 0.728145411609159 0.267981193471071 -0.366137950147571 1.23405103697604 B4DWF2 IKZF2 B4DWF2.S84.p_IKZF2 B4DWF2_S84sS85s_2_2_84_85 B4DWF2 B4DWF2|Q9UKS7 Zinc finger protein Helios HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16865.16865.4 8.73 8.73 8.733 4 2 2 0 883.1449 3369.6244 S84s S85s Hydrogen 74 (R) EDEIRGHDEGssLEEPLIESSEVADNRK (V) EDEIRGHDEGS(0.99)S(0.99)LEEPLIES(0.0)S(0.0)EVADNRK K:TMT10-Lys-Only,s:Phosphorylated S IKZF2 61457.9 1 5 2223.2 92.84 HUMAN 1 -1.3778 5.719 IRHFPCPSPESKLQN-p Q96NA8;S47-p IRHFPCPSPESKLQN 0.2592179584854 0.0864840304098248 0.228666666666667 0.247 11.1383093982545 14.075302808576 0.228666666666667 0.247 0.0769429902158221 0.0391263845597072 2.18035786805232 2.70512137560583 Q96NA8 TSNARE1 Q96NA8.S47.p_TSNARE1 Q96NA8_S47s _1_1_47_47 Q96NA8 A0AVG3|Q96NA8|Q96NA8-2 t-SNARE domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10658.10658.3 13.28 13.28 5.951 2 1 1 0 575.2811 1643.8616 S47s TMT10 42 (R) HFPCPsPESK (L) HFPCPS(0.99)PES(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TSNARE1 56689.5 1 2 4697.1 27.83 HUMAN 1 11.1383 14.0753 IRHLRTHSGERPYIC-p Q92766;S694-p IRHLRTHSGERPYIC 0.513153005000153 0.0245048666441288 -0.106666666666667 -0.519 5.35601328132219 21.9290175926949 -0.106666666666667 -0.519 0.291339031300852 0.00641354639497798 -1.16891771171425 -4.30118683415058 Q92766 RREB1 Q92766.S694.p_RREB1 Q92766_S694s _1_1_694_694 Q92766 Q92766-2|Q92766-3|Q92766-5 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6764.6764.3 8.56 8.56 1.472 3 1 1 0 629.3183 1805.9733 S694s TMT10 692 (R) THsGERPYICK (I) T(0.0)HS(0.99)GERPY(0.0)ICK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RREB1 184269.8 1 16 179.1 480.48 HUMAN 1 -5.356 -21.929 IRIGEEDSTDDEDGL-p Q8IX21-2;S710-p IRIGEEDSTDDEDGL 0.235118035263392 0.0546575861182109 0.2025 -0.246833333333333 12.0465023943857 16.8261447215684 0.2025 -0.246833333333333 0.0624237364816808 0.0207675625810173 2.34058551712947 -3.22604364459466 Q8IX21 SLF2 Q8IX21.2.S710.p_SLF2 Q8IX21-2_S710sT711t_2_2_710_711 Q8IX21-2 Q8IX21-2 Isoform 2 of SMC5-SMC6 complex localization factor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15535.15535.3 15.47 15.47 99 2 2 2 0 807.3272 2260.0302 S710s T711t Hydrogen 705 (R) IGEEDstDDEDGLLEEHK (E) IGEEDS(1.0)T(1.0)DDEDGLLEEHK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T SLF2 134456.8 3 11 1220.1 164.91 HUMAN 2 12.0465 -16.8261 IRISKPPSPKPMPVI-p Q9NNX1;S378-p IRISKPPSPKPMPVI 0.346622451535827 0.961050637830868 -0.161 -0.00566666666666665 8.55192484729543 0.247279199734571 -0.161 -0.00566666666666666 0.139574961031633 0.944652503846489 -1.73079730722347 -0.0726985458264127 Q9NNX1 TUFT1 Q9NNX1.S378.p_TUFT1 Q9NNX1_S378s _1_1_378_378 Q9NNX1 Q9NNX1|Q9NNX1-2|A6PVU8|Q9NNX1-3 Tuftelin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16607.16607.4 12.26 9.77 1.772 2 1 1 0 579.347 2234.4026 S378s TMT10 373 (R) ISKPPsPKPMPVIR (V) IS(0.0)KPPS(0.99)PKPMPVIR K:TMT10,s:Phosphorylated S TUFT1 44548.3 4 2 3909.1 40.92 HUMAN 1 -8.5519 -0.2473 IRKERPISLGIFPLP-p O60271;S203-p IRKERPISLGIFPLP 0.0775649771385732 0.0584042510352364 -0.352666666666667 -0.256 23.7729905098133 16.4322900441784 -0.352666666666667 -0.256 0.00419470041505928 0.0227389808322252 -4.73957604264424 -3.14934060689694 O60271 SPAG9 O60271.S203.p_SPAG9 O60271_S203s _1_1_203_203 O60271 O60271-4|O60271-9|O60271-3|O60271-5|A0A087X2D8|O60271-2 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32127.32127.5 24.55 18.88 10.873 4 1 1 0 886.676 4349.3748 S203s TMT10 199 (K) ERPIsLGIFPLPAGDGLLTPDAQKGGETPGSEQWK (F) ERPIS(0.99)LGIFPLPAGDGLLT(0.0)PDAQKGGET(0.0)PGS(0.0)EQWK K:TMT10,s:Phosphorylated S SPAG9 147001.6 8 14 84.1 629.25 HUMAN 1 -23.773 -16.4323 IRKLASASLLDTDKR-p Q9NY61;S63-p IRKLASASLLDTDKR 0.361753568197081 0.0721717454494214 -0.162333333333333 0.49 8.20340689539787 15.1710215575197 -0.162333333333333 0.49 0.151237437569743 0.0304016982578985 -1.67042901681738 2.90866374937862 Q9NY61 AATF Q9NY61.S63.p_AATF Q9NY61_S63s _1_1_63_63 Q9NY61 Q9NY61 Protein AATF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22022.22022.3 9.14 9.14 2.568 3 1 1 0 557.9709 1591.9307 S63s TMT10 59 (K) LASAsLLDTDK (R) LAS(0.0)AS(0.99)LLDT(0.0)DK K:TMT10,s:Phosphorylated S AATF 63245.9 2 1 2183.1 94.22 HUMAN 1 -8.2034 15.171 IRKLFNLSKEDDVRQ-p P62753;S148-p IRKLFNLSKEDDVRQ 0.887539377298516 0.820758653489134 -0.0213333333333333 -0.044 1.00908692500593 1.20069449591712 -0.0213333333333333 -0.044 0.792667966081549 0.758456277861177 -0.276156236260078 -0.323456814850177 P62753 RPS6 P62753.S148.p_RPS6 P62753_S148s _1_1_148_148 P62753 P62753|A2A3R5 40S ribosomal protein S6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22824.22824.4 14.88 10.46 14.883 2 1 1 0 630.5902 2439.376 S148s TMT10 144 (K) LFNLsKEDDVRQYVVR (K) LFNLS(0.99)KEDDVRQY(0.0)VVR K:TMT10,s:Phosphorylated S RPS6 28851.3 2 3 2203.1 93.5 HUMAN 1 -1.0091 -1.2007 IRKNRNCSQLIAAYK-p A0A087X2H1;S1949-p IRKNRNCSQLIAAYK 0.953803111483038 0.0868047191387479 -0.0143333333333333 -0.620333333333333 0.402080038103261 14.0520436337001 -0.0143333333333333 -0.620333333333333 0.911574139567374 0.0393364928503819 -0.11634631343411 -2.70085131220827 A0A087X2H1 NotFound A0A087X2H1.S1949.p_NotFound A0A087X2H1_S1949s _1_1_1949_1949 A0A087X2H1 A0A087X2H1|Q9ULT8 E3 ubiquitin-protein ligase HECTD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19265.19265.3 12.61 12.61 12.615 2 1 1 0 569.2983 1625.9085 S1949s TMT10 1947 (R) NCsQLIAAYK (D) NCS(0.99)QLIAAY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HECTD1 292594.4 1 18 365.1 342.23 HUMAN 1 -0.4021 -14.052 IRKPHTESLELQVRG-p Q9BSJ8-2;S870-p IRKPHTESLELQVRG 0.63246952218024 0.0316359987498557 0.082 0.289 3.70637609275742 20.2612288149857 0.082 0.289 0.425953695759287 0.00941623131169653 0.860569838459001 3.93149816054075 Q9BSJ8 ESYT1 Q9BSJ8.2.S870.p_ESYT1 Q9BSJ8-2_S870s _1_1_870_870 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11863.11863.3 12.26 12.26 1.119 2 1 1 0 659.0269 1895.1115 S870s TMT10 865 (R) KPHTEsLELQVR (G) KPHT(0.0)ES(0.99)LELQVR K:TMT10,s:Phosphorylated S ESYT1 124514 1 7 400.1 328.2 HUMAN 1 3.7064 20.2612 IRKPRYGSPPQRDPN-p O15234;S265-p IRKPRYGSPPQRDPN 0.744118013547764 0.565270152439654 0.0516666666666667 0.0616666666666667 2.43646327254887 3.3403546289788 0.0516666666666667 0.0616666666666667 0.570628781277952 0.463409077902066 0.603428440228461 0.788615448856062 O15234 CASC3 O15234.S265.p_CASC3 O15234_S265s _1_1_265_265 O15234 O15234 Protein CASC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8684.8894.3 16.04 12.2 5.416 2 1 1 0 694.6521 2001.9729 S265s TMT10 263 (R) YGsPPQRDPNWNGER (L) Y(0.0)GS(0.99)PPQRDPNWNGER s:Phosphorylated S CASC3 76390.7 15 7 323.1 362.08 HUMAN 1 2.4365 3.3404 IRKRHKGSEEEHDAL-p O15417;S1579-p IRKRHKGSEEEHDAL 0.701043821371557 0.237731998563112 0.055 -0.188666666666667 2.90146487730057 8.21777092026341 0.055 -0.188666666666667 0.512688424780066 0.15073805527103 0.700326646718984 -1.67237302296709 O15417 TNRC18 O15417.S1579.p_TNRC18 O15417_S1579s _1_1_1579_1579 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11254.11254.4 16.66 10.13 99 1 1 1 0 627.0737 2425.3113 S1579s TMT10 1576 (R) HKGsEEEHDALIGMGK (A) HKGS(1.0)EEEHDALIGMGK K:TMT10,s:Phosphorylated S TNRC18 316168 4 13 75.1 647.68 HUMAN 1 2.9015 -8.2178 IRKRRLITFNEADES-p Q6PI47;T259-p IRKRRLITFNEADES 0.0118555182322253 0.00111131906301753 -1.10433333333333 -1.09966666666667 45.9086602894009 49.6452923903961 -1.10433333333333 -1.09966666666667 2.56527524998218e-05 1.0851024922394e-05 -13.1737622340809 -15.4531104308408 Q6PI47 KCTD18 Q6PI47.T259.p_KCTD18 Q6PI47_T259t _1_1_259_259 Q6PI47 Q6PI47|Q6PI47-3 BTB/POZ domain-containing protein KCTD18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25875.25875.3 12.65 12.65 3.46 3 1 1 0 727.7005 2101.1218 T259t TMT10 257 (R) LItFNEADESVNYK (T) LIT(0.99)FNEADES(0.0)VNY(0.0)K K:TMT10,t:Phosphorylated T KCTD18 47251.8 2 1 2706.1 73.29 HUMAN 1 -45.9087 -49.6453 IRLGRSESLKGREEM-p O15085-2;S654-p IRLGRSESLKGREEM 0.354202863346648 0.82412019289063 -0.204333333333333 0.059 8.37704981041174 1.17708008119885 -0.204333333333333 0.059 0.145309838121447 0.762591555575478 -1.70051387780862 0.31769360418189 O15085 ARHGEF11 O15085.2.S654.p_ARHGEF11 O15085-2_S654s _1_1_654_654 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9638.9638.3 11.98 2.08 3.328 2 1 1 0 476.6056 1347.836 S654s TMT10 649 (R) LGRSEsLK (G) LGRS(0.0)ES(0.99)LK K:TMT10,s:Phosphorylated S ARHGEF11 173153.4 4 10 228.1 424.05 HUMAN 1 -8.377 1.1771 IRLPSAQTPNGTDYV-p Q9Y520-7;T1967-p IRLPSAQTPNGTDYV 0.271805915294563 0.0316359987498557 -0.181333333333333 -0.278666666666667 10.7187527870392 20.258774760206 -0.181333333333333 -0.278666666666667 0.0847470757033189 0.00942155361681887 -2.1069069960014 -3.93096834502875 Q9Y520 PRRC2C Q9Y520.7.T1967.p_PRRC2C Q9Y520-7_T1967t_1_1_1967_1967 Q9Y520-7 Q9Y520-7|Q9Y520-5|E7EPN9|Q9Y520-4|Q9Y520-6|Q9Y520-3|Q9Y520-2 Isoform 7 of Protein PRRC2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19242.19242.4 15.54 15.54 1.739 6 1 1 0 755.8947 2939.5991 T1967t N1969n TMT10 1955 (K) QPPPSIRLPSAQtPnGTDYVASGK (S) QPPPS(0.0)IRLPS(0.0)AQT(0.99)PN(1.0)GT(0.0)DY(0.0)VAS(0.0)GK K:TMT10,t:Phosphorylated T,n:Deamidated PRRC2C 317703.2 6 107 36.3 882.05 HUMAN 1 -10.7188 -20.2588 IRLVEPGSPAEKAGL-p O14745;S46-p IRLVEPGSPAEKAGL 0.711507076446246 0.416128934158394 0.057 -0.088 2.77946772050123 5.06500761541027 0.057 -0.088 0.527294483667928 0.311529543325787 0.675252361213037 -1.11572986504689 O14745 SLC9A3R1 O14745.S46.p_SLC9A3R1 O14745_S46s _1_1_46_46 O14745 O14745 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14284.14284.2 13.22 8.32 99 1 1 1 0 782.9239 1484.8725 S46s TMT10 41 (R) LVEPGsPAEK (A) LVEPGS(1.0)PAEK K:TMT10,s:Phosphorylated S SLC9A3R1 39153 4 2 534.1 279.04 HUMAN 1 2.7795 -5.065 IRMPSLPSYKVGDKI-p P29401-2;S316-p IRMPSLPSYKVGDKI 0.472422836600032 0.0549350907862547 -0.139 0.346666666666667 6.00521240789831 16.7955091858404 -0.139 0.346666666666667 0.250887347065944 0.0209145768108389 -1.28549208699902 3.2200495262619 P29401 TKT P29401.2.S316.p_TKT P29401-2_S316s _1_1_316_316 P29401-2 P29401-2|A0A0B4J1R6|E9PFF2 Isoform 2 of Transketolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19795.19795.4 9.67 9.02 2.913 3 1 1 0 523.0396 2009.1708 S316s TMT10 311 (R) MPSLPsYKVGDK (I) MPS(0.0)LPS(0.99)Y(0.0)KVGDK K:TMT10,s:Phosphorylated S TKT 69497 1 8 1447.1 140.91 HUMAN 1 -6.0052 16.7955 IRNLSFDSEEEELGE-p Q9NW13;S346-p IRNLSFDSEEEELGE 0.357172198749098 0.0495693570405251 0.137 0.241 8.31038408058318 17.4510554698528 0.137 0.241 0.147557603077416 0.0179843378700445 1.68896563271797 3.34937162937258 Q9NW13 RBM28 Q9NW13.S346.p_RBM28 Q9NW13_S346s _1_1_346_346 Q9NW13 Q9NW13|Q9NW13-2 RNA-binding protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.38087.38087.3 13.39 13.39 2.281 2 1 1 0 1031.5088 3012.5454 S346s TMT10 341 (R) NLSFDsEEEELGELLQQFGELK (Y) NLS(0.0)FDS(0.99)EEEELGELLQQFGELK K:TMT10,s:Phosphorylated S RBM28 86249.5 1 3 3296.1 54.56 HUMAN 1 8.3104 17.4511 IRNMRAASPPASASD-p Q5VSL9;S335-p IRNMRAASPPASASD 0.383617908533383 0.439354112610501 0.163 -0.087 7.70389797219791 4.75754788358769 0.163 -0.087 0.169672009253249 0.334383786733565 1.58374879487187 -1.05922883273861 Q5VSL9 STRIP1 Q5VSL9.S335.p_STRIP1 Q5VSL9_S335s _1_1_335_335 Q5VSL9 Q5VSL9|Q5VSL9-2|Q5VSL9-3 Striatin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17215.17420.2 22.43 14.92 4.405 3 1 1 0 1140.087 2199.2021 S335s TMT10 333 (R) AAsPPASASDLIEQQQK (R) AAS(0.99)PPAS(0.0)AS(0.0)DLIEQQQK K:TMT10,s:Phosphorylated S STRIP1 96315.8 9 2 2589.1 77.45 HUMAN 1 7.7039 -4.7575 IRNPFRGSPKCFRSV-p Q14966;S552-p IRNPFRGSPKCFRSV 0.273881442558175 0.0449094045798997 0.196666666666667 0.417333333333333 10.6506992664166 18.0365404781955 0.196666666666667 0.417333333333333 0.0860855132981806 0.0157161422910806 2.09502145185561 3.46681868670515 Q14966 ZNF638 Q14966.S552.p_ZNF638 Q14966_S552s _1_1_552_552 Q14966 Q14966|Q14966-3|Q14966-4|A0A096LPH6|Q14966-2|Q68DL7 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5236.5236.2 11.04 5.16 99 1 1 1 0 606.3103 1131.6472 S552s Hydrogen 547 (R) NPFRGsPK (C) NPFRGS(1.0)PK K:TMT10-Lys-Only,s:Phosphorylated S ZNF638 222047.2 9 6 165.1 494.68 HUMAN 1 10.6507 18.0365 IRNRKAGSMEVLSET-p Q6PFW1;S987-p IRNRKAGSMEVLSET 0.0683636000573323 0.027919310319216 0.495666666666667 0.400333333333333 25.1532461523559 21.0604226336909 0.495666666666667 0.400333333333333 0.00305263855275233 0.00783353407017163 5.0826943179167 4.1062101836219 Q6PFW1 PPIP5K1 Q6PFW1.S987.p_PPIP5K1 Q6PFW1_S987s _1_1_987_987 Q6PFW1 Q6PFW1|Q6PFW1-2|B7WPL9|F8W9A8|Q6PFW1-3|Q6PFW1-4 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11999.11999.4 15.03 15.03 3.289 7 1 1 0 660.0828 2557.3445 S987s TMT10 984 (R) KAGsMEVLSETSSSRPGGYR (L) KAGS(0.99)MEVLS(0.0)ET(0.0)S(0.0)S(0.0)S(0.0)RPGGY(0.0)R K:TMT10,s:Phosphorylated S PPIP5K1 161343.9 5 5 1248.1 162.13 HUMAN 1 25.1532 21.0604 IRPKNTASLNSREYR-p O00522;S22-p IRPKNTASLNSREYR 0.698400439338318 0.607552088011134 -0.0533333333333333 -0.0596666666666667 2.92913996664983 2.93869704061133 -0.0533333333333333 -0.0596666666666667 0.509431743835731 0.508311922151393 -0.705982709686182 -0.707835046455615 O00522 KRIT1 O00522.S22.p_KRIT1 O00522_S22s _1_1_22_22 O00522 O00522|O00522-3 Krev interaction trapped protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4814.4814.2 11.63 5.93 1.45 3 1 1 0 586.2881 1091.6007 S22s TMT10 19 (K) NTAsLNSR (E) NT(0.0)AS(0.99)LNS(0.0)R s:Phosphorylated S KRIT1 85031.2 1 1 6444.1 11.63 HUMAN 1 -2.9291 -2.9387 IRRGRRQSEPVKDPY-p Q9H7P9;S482-p IRRGRRQSEPVKDPY 0.930920423214409 0.449445310509768 0.026 -0.237 0.617341044041797 4.62998070563879 0.026 -0.237 0.867492833291754 0.344351460607023 0.174931287624428 -1.03559529765495 Q9H7P9 PLEKHG2 Q9H7P9.S482.p_PLEKHG2 Q9H7P9_S482s _1_1_482_482 Q9H7P9 Q9H7P9|E7ESZ3|Q9H7P9-2 Pleckstrin homology domain-containing family G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20007.20007.5 21.24 16.19 6.489 2 1 1 0 712.7906 3479.9643 S482s TMT10 480 (R) RQsEPVKDPYVMFPQNAKPGFK (H) RQS(0.99)EPVKDPY(0.0)VMFPQNAKPGFK K:TMT10,s:Phosphorylated S PLEKHG2 149335.7 3 7 886.1 206.23 HUMAN 1 0.6173 -4.63 IRRKIMSSPLSKELR-p P61254;S32-p IRRKIMSSPLSKELR 0.459669818817872 0.00279632784090102 -0.116666666666667 -0.695 6.22369250214302 38.615301342161 -0.116666666666667 -0.695 0.238578195685213 0.000137552936366266 -1.32431634247936 -9.52565456790915 P61254 RPL26 P61254.S32.p_RPL26 P61254_S32s _1_1_32_32 P61254 P61254|Q9UNX3|J3QQV1|J3QQQ9 60S ribosomal protein L26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15006.15006.3 7.36 7.36 1.422 3 1 1 0 586.6802 1678.054 S32s TMT10 28 (R) KIMSsPLSK (E) KIMS(0.0)S(0.99)PLS(0.0)K K:TMT10,s:Phosphorylated S RPL26 17257.9 2 3 2947.1 65.03 HUMAN 1 -6.2237 -38.6153 IRRLVTISPNNKPKL-p Q6IQ26;S1096-p IRRLVTISPNNKPKL 0.993618410078581 0.00119266166986335 -0.00133333333333334 -1.06666666666667 0.0581602811374304 48.2134485182179 -0.00133333333333334 -1.06666666666667 0.986697372898839 1.50888154995405e-05 -0.0174573420486242 -14.5230329591952 Q6IQ26 DENND5A Q6IQ26.S1096.p_DENND5A Q6IQ26_S1096s _1_1_1096_1096 Q6IQ26 Q6IQ26|Q6IQ26-2 DENN domain-containing protein 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16661.16661.3 10.26 10.26 1.142 2 1 1 0 660.0631 1898.2042 S1096s TMT10 1092 (R) LVTIsPNNKPK (L) LVT(0.0)IS(0.99)PNNKPK K:TMT10,s:Phosphorylated S DENND5A 148633.4 3 5 2138.1 96.07 HUMAN 1 -0.0582 -48.2134 IRRPRNYSVGSRPLK-p O60825;S483-p IRRPRNYSVGSRPLK 0.00874686268802314 0.0063803902699255 -1.317 -0.803333333333333 50.2683202707448 31.5825071369883 -1.317 -0.803333333333333 9.40086839482867e-06 0.000694623203051525 -15.925020372342 -6.91670106004333 O60825 PFKFB2 O60825.S483.p_PFKFB2 O60825_S483s _1_1_483_483 O60825 O60825 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16479.16479.4 10.88 11.37 2.807 4 1 1 0 581.3332 2242.3436 S483s TMT10 481 (R) NYsVGSRPLKPLSPLR (A) NY(0.0)S(0.99)VGS(0.0)RPLKPLS(0.0)PLR K:TMT10,s:Phosphorylated S PFKFB2 58989.2 12 3 2266.1 90.54 HUMAN 1 -50.2683 -31.5825 IRRPVGASFSFGGKL-p D6REX3;S397-p IRRPVGASFSFGGKL 0.210938152318629 0.040720136274863 0.218 0.284 13.0481196110006 18.6357035582857 0.218 0.284 0.0495664755079718 0.0136908257866115 2.51974144560111 3.58901173577203 D6REX3 NotFound D6REX3.S397.p_NotFound D6REX3_S397s _1_1_397_397 D6REX3 D6REX3|O94979-8|O94979-7|H7BXG7|D6RHZ5|O94979-5 Protein transport protein Sec31A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16515.16515.3 8.61 8.61 1.216 2 1 1 0 583.3165 1667.9633 S397s TMT10 392 (R) RPVGAsFSFGGK (L) RPVGAS(0.99)FS(0.0)FGGK K:TMT10,s:Phosphorylated S SEC31A 137193.7 1 4 665.1 250.42 HUMAN 1 13.0481 18.6357 IRRVEPGSPAEAAAL-p Q15599;S43-p IRRVEPGSPAEAAAL 0.691117778411888 0.0303128907164523 0.0886666666666667 -0.296666666666667 3.00863353400243 20.5314258207131 0.0886666666666667 -0.296666666666667 0.500191890808837 0.0088482506756501 0.722165321579412 -3.99007872363367 Q15599 SLC9A3R2 Q15599.S43.p_SLC9A3R2 Q15599_S43s _1_1_43_43 Q15599 Q15599 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9940.9940.3 15.09 15.09 99 1 1 1 0 578.3035 1652.9281 S43s TMT10 38 (R) RVEPGsPAEAAALR (A) RVEPGS(1.0)PAEAAALR s:Phosphorylated S SLC9A3R2 37641.3 1 1 2026.1 101.71 HUMAN 1 3.0086 -20.5314 IRSILQRSVANPAFL-p Q99567;S540-p IRSILQRSVANPAFL 0.692464643836822 0.44001827838499 -0.063 0.091 2.99295450889616 4.74887308232968 -0.063 0.091 0.502000961667787 0.335052368065932 -0.718980916598881 1.05762541613794 Q99567 NUP88 Q99567.S540.p_NUP88 Q99567_S540s _1_1_540_540 Q99567 Q99567 Nuclear pore complex protein Nup88 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20458.20458.3 13.7 9.36 99 1 1 1 0 495.6158 1404.8615 S540s TMT10 540 (R) sVANPAFLK (A) S(1.0)VANPAFLK K:TMT10,s:Phosphorylated S NUP88 84681.5 4 10 1211.1 166.39 HUMAN 1 -2.993 4.7489 IRSKIYRSQSPHYFR-p Q9UKJ3;S1033-p IRSKIYRSQSPHYFR 0.481585053398966 0.920802265510344 -0.0943333333333333 0.0173333333333334 5.83882612160331 0.503892602802642 -0.0943333333333333 0.0173333333333334 0.260685807675989 0.890452463426021 -1.25579808098786 0.144330631794315 Q9UKJ3 GPATCH8 Q9UKJ3.S1033.p_GPATCH8 Q9UKJ3_S1033sS1035s_2_2_1033_1035 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11217.11217.4 11.44 11.44 2.731 4 2 2 0 461.4627 1682.8964 S1033s S1035s TMT10 1030 (K) IYRsQsPHYFR (S) IY(0.0)RS(0.99)QS(0.99)PHY(0.0)FR s:Phosphorylated S GPATCH8 165107.3 4 20 231.1 422.52 HUMAN 1 -5.8388 0.5039 IRSKPPYTDYVSTRW-p Q9UPZ9;T157-p IRSKPPYTDYVSTRW 0.38996170793626 0.299040184050562 0.116333333333333 0.100666666666667 7.56610853467513 6.92259381301121 0.116333333333333 0.100666666666667 0.175141532918904 0.203114355316044 1.55978799565173 1.44706138547955 Q9UPZ9 ICK Q9UPZ9.T157.p_ICK Q9UPZ9_T157tY159y_2_2_157_159 Q9UPZ9 Q9UPZ9|Q9UPZ9-2 Serine/threonine-protein kinase ICK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11031.11031.2 9.63 7.23 1.14 6 2 2 0 1016.4829 1872.0267 T157t Y159y TMT10 152 (R) SKPPYtDyVSTR (W) S(0.0)KPPY(0.0)T(0.99)DY(0.99)VS(0.0)T(0.0)R K:TMT10,t:Phosphorylated T,y:Phosphorylated Y ICK 71767.8 3 2 6576.1 10.85 HUMAN 1 7.5661 6.9226 IRSLLKNSPRNQQKN-p Q6NZY4;S695-p IRSLLKNSPRNQQKN 0.45060350179761 0.0257729799287224 0.287333333333333 -0.903 6.39246118804243 21.6096229946158 0.287333333333333 -0.903 0.229484776752909 0.00690299725259563 1.35418890668609 -4.22885645993011 Q6NZY4 ZCCHC8 Q6NZY4.S695.p_ZCCHC8 Q6NZY4_S695s _1_1_695_695 Q6NZY4 Q6NZY4|Q6NZY4-2 Zinc finger CCHC domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9997.9997.3 8.72 3.64 5.038 2 1 1 0 484.9489 1372.8677 S695s TMT10 690 (R) SLLKNsPR (N) S(0.0)LLKNS(0.99)PR K:TMT10,s:Phosphorylated S ZCCHC8 79203.5 4 15 443.1 311.3 HUMAN 1 6.3925 -21.6096 IRSLRDLTPEHLPLL-p Q96C86;T234-p IRSLRDLTPEHLPLL 0.93560338988576 0.55993094730898 -0.0136666666666667 -0.0633333333333333 0.566322365390044 3.39526085736238 -0.0136666666666667 -0.0633333333333333 0.877743785811786 0.457587249253254 -0.16125295914191 -0.799490856672199 Q96C86 DCPS Q96C86.T234.p_DCPS Q96C86_T234t _1_1_234_234 Q96C86 Q96C86 m7GpppX diphosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21048.21048.3 8.98 5.08 1.593 2 1 1 0 657.0347 1889.117 T234t TMT10 229 (R) SLRDLtPEHLPLLR (N) S(0.0)LRDLT(0.99)PEHLPLLR t:Phosphorylated T DCPS 38779.2 1 2 5225.1 21.57 HUMAN 1 -0.5663 -3.3953 IRSSGQLSGRSVSLR-p Q9P206-3;S437-p IRSSGQLSGRSVSLR 0.0285082967552234 0.140172445569666 0.633666666666667 0.229666666666667 36.1618847699014 11.2449601227326 0.633666666666667 0.229666666666667 0.000241997858607922 0.0750764947672212 8.54924326911489 2.19806456862151 Q9P206 KIAA1522 Q9P206.3.S437.p_KIAA1522 Q9P206-3_S437s _1_1_437_437 Q9P206-3 Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4189.4189.2 9.53 6.51 5.891 3 1 1 0 550.7684 1020.5635 S437s TMT10 432 (R) SSGQLsGR (S) S(0.0)S(0.0)GQLS(0.99)GR s:Phosphorylated S KIAA1522 108782.6 1 18 62.1 704.36 HUMAN 1 36.1619 11.245 IRSSGRNSPSAASTS-p Q9P2R6;S613-p IRSSGRNSPSAASTS 0.585348442250855 0.194426669935272 0.076 -0.216 4.27804964749164 9.35279307024904 0.076 -0.216 0.373417816584048 0.116070189363747 0.969919733637924 -1.8687508784601 Q9P2R6 RERE Q9P2R6.S613.p_RERE Q9P2R6_S613s _1_1_613_613 Q9P2R6 Q9P2R6|B1AKN3|Q9P2R6-2 Arginine-glutamic acid dipeptide repeats protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6942.6942.3 20.72 20.72 4.368 8 1 1 0 926.1496 2696.467 S613s Hydrogen 612 (R) NsPSAASTSSNDSKAETVKK (S) NS(0.99)PS(0.0)AAS(0.0)T(0.0)S(0.0)S(0.0)NDS(0.0)KAET(0.0)VKK K:TMT10-Lys-Only,s:Phosphorylated S RERE 173561.6 14 6 278.1 389.04 HUMAN 1 4.278 -9.3528 IRSVDPDSPAEASGL-p O14745;S186-p IRSVDPDSPAEASGL 0.922345826324192 0.140171743295094 0.0243333333333333 0.300666666666667 0.688407962549113 11.2456417055541 0.0243333333333333 0.300666666666667 0.853412900929812 0.0750647131683081 0.193782493523144 2.1981841707848 O14745 SLC9A3R1 O14745.S186.p_SLC9A3R1 O14745_S186s _1_1_186_186 O14745 O14745|O14745-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12090.12090.2 12.98 7.5 1.8 3 1 1 0 855.4023 1629.8281 S186s TMT10 181 (R) SVDPDsPAEASGLR (A) S(0.0)VDPDS(0.99)PAEAS(0.0)GLR s:Phosphorylated S SLC9A3R1 39153 1 6 534.1 279.04 HUMAN 1 0.6884 11.2456 IRSVDPGSPAARSGL-p Q15599;S183-p IRSVDPGSPAARSGL 0.849119588694523 0.419215258420825 -0.0273333333333333 -0.0813333333333333 1.37469213631179 5.02447437168502 -0.0273333333333333 -0.0813333333333333 0.728669826799565 0.314450697814181 -0.365393748082847 -1.10831635142573 Q15599 SLC9A3R2 Q15599.S183.p_SLC9A3R2 Q15599_S183s _1_1_183_183 Q15599 Q15599|Q15599-2|H3BQS0|Q15599-3 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6222.6222.2 8.81 8.81 2.538 2 1 1 0 633.3098 1185.6425 S183s TMT10 178 (R) SVDPGsPAAR (S) S(0.0)VDPGS(0.99)PAAR s:Phosphorylated S SLC9A3R2 37641.3 1 2 2026.1 101.71 HUMAN 1 -1.3747 -5.0245 IRTLTEPSVDFNHSD-p Q6R327-3;S1138-p IRTLTEPSVDFNHSD 0.278066029924807 0.127774241521248 -0.266333333333333 0.199666666666667 10.5189858756246 11.780778004433 -0.266333333333333 0.199666666666667 0.0887363196707694 0.066362417669698 -2.07203824372012 2.29239072961914 Q6R327 RICTOR Q6R327.3.S1138.p_RICTOR Q6R327-3_T1135tS1138s_2_2_1135_1138 Q6R327-3 Q6R327-3 Isoform 3 of Rapamycin-insensitive companion of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25831.25831.3 9.47 9.47 1.12 7 2 2 0 1066.1654 3036.5566 T1135t S1138s TMT10 1133 (R) TLtEPsVDFNHSDDFTPISTVQK (T) T(0.0)LT(0.99)EPS(0.99)VDFNHS(0.0)DDFT(0.0)PIS(0.0)T(0.0)VQK K:TMT10,t:Phosphorylated T,s:Phosphorylated S RICTOR 197118.3 2 24 452.1 308.36 HUMAN 1 -10.519 11.7808 IRTQQHYYDKCPKRV-p P06737;Y76-p IRTQQHYYDKCPKRV 0.984880457815387 0.0195411609544478 0.0116666666666667 0.995 0.133683548586329 23.4643238410891 0.0116666666666666 0.995 0.969687160341893 0.0045036809424334 0.0397902751104044 4.65970340822864 P06737 PYGL P06737.Y76.p_PYGL P06737_Y76y _1_1_76_76 P06737 P06737 Glycogen phosphorylase, liver form GG20160819_MSz_CCLE_T4D7_pY_Injection_01.6695.6695.3 11.64 11.64 1.67 3 1 1 0 540.9318 1540.816 Y76y TMT10 71 (R) TQQHYyDK (C) T(0.0)QQHY(0.0)Y(0.99)DK K:TMT10,y:Phosphorylated Y PYGL 97546.2 1 1 87.2 30.87 HUMAN 1 0.1337 23.4643 IRVICILSHPIKNTN-p P50395;S305-p IRVICILSHPIKNTN 0.549826938823893 0.0444493124438295 -0.0903333333333333 0.293 4.79223448119415 18.1019708200479 -0.0903333333333334 0.293 0.331723739018366 0.0154811392834662 -1.06584272993799 3.48006226430085 P50395 GDI2 P50395.S305.p_GDI2 P50395_S305s _1_1_305_305 P50395 P50395|P50395-2 Rab GDP dissociation inhibitor beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22322.22322.3 10.71 10.71 99 1 1 1 0 573.3329 1638.0177 S305s TMT10 300 (R) VICILsHPIK (N) VICILS(1.0)HPIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GDI2 51118.8 1 3 1810.1 113.37 HUMAN 1 -4.7922 18.102 IRVLRQKSDHGAYSQ-p Q9Y4B6;S979-p IRVLRQKSDHGAYSQ 0.963046342073043 0.823310497635034 -0.00733333333333334 0.0293333333333333 0.31505013523979 1.18343812329787 -0.00733333333333333 0.0293333333333334 0.930025778413415 0.761475943474269 -0.0919765921917357 0.319247181709504 Q9Y4B6 VPRBP Q9Y4B6.S979.p_VPRBP Q9Y4B6_S979s _1_1_979_979 Q9Y4B6 Q9Y4B6|Q9Y4B6-2|Q9Y4B6-3 DDB1- and CUL4-associated factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7713.7713.5 16.25 16.25 5.454 4 1 1 0 549.1086 2661.5494 S979s TMT10 977 (R) QKsDHGAYSQSPAIKK (Q) QKS(0.99)DHGAY(0.0)S(0.0)QS(0.0)PAIKK K:TMT10,s:Phosphorylated S DCAF1 170772.9 2 7 1102.1 177.43 HUMAN 1 -0.3151 1.1834 IRVNPRVSNVKSVYK-p P33991;S406-p IRVNPRVSNVKSVYK 0.826817782780066 0.512654585701601 0.0313333333333333 0.091 1.59091511706248 3.89286699478669 0.0313333333333333 0.091 0.693279707237515 0.408049923264756 0.416172594308091 0.896445987953414 P33991 MCM4 P33991.S406.p_MCM4 P33991_S406s _1_1_406_406 P33991 P33991 DNA replication licensing factor MCM4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10360.10360.3 10.16 10.16 99 1 1 1 0 517.633 1470.9157 S406s TMT10 401 (R) VNPRVsNVK (S) VNPRVS(1.0)NVK K:TMT10,s:Phosphorylated S MCM4 97126.8 4 8 1487.1 137.87 HUMAN 1 1.5909 3.8929 IRYLSADSGDADDSD-p Q15361;S481-p IRYLSADSGDADDSD 0.434272682849394 0.0113589180573693 0.122333333333333 0.451333333333333 6.67261525408772 27.2236267458698 0.122333333333333 0.451333333333333 0.215148575316448 0.00189512266394746 1.40357554556644 5.62206412244555 Q15361 TTF1 Q15361.S481.p_TTF1 Q15361_S478sS481sS487s_3_3_478_487 Q15361 Q15361 Transcription termination factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19215.19215.5 19.79 19.79 1.99 7 3 3 0 1150.9072 5510.6108 S478s S481s S487s TMT10 450 (K) HVQEAPRLEPANEEHNVETAEDSEIRYLsADsGDADDsDADLGSAVK (Q) HVQEAPRLEPANEEHNVET(0.0)AEDS(0.0)EIRY(0.0)LS(0.99)ADS(0.99)GDADDS(0.99)DADLGS(0.0)AVK K:TMT10,s:Phosphorylated S TTF1 103505.6 1 9 1295.1 156.82 HUMAN 1 6.6726 27.2236 ISAAASDSGVESFDE-p Q12929;S811-p ISAAASDSGVESFDE 0.306383440584975 0.624364726670389 0.166666666666667 0.0756666666666667 9.62303024061455 2.7818655931071 0.166666666666667 0.0756666666666667 0.1090679061918 0.527003428620785 1.91628569649282 0.675656516841262 Q12929 EPS8 Q12929.S811.p_EPS8 Q12929_S811sS815s_2_2_811_815 Q12929 Q12929 Epidermal growth factor receptor kinase substrate 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17011.17011.3 14.48 14.48 2.62 6 2 2 0 747.9684 2081.9461 S811s S815s TMT10 804 (K) ISAAASDsGVEsFDEGSSH (-) IS(0.0)AAAS(0.0)DS(0.99)GVES(0.99)FDEGS(0.0)S(0.0)H s:Phosphorylated S EPS8 92222.2 1 12 994.1 191.04 HUMAN 1 9.623 2.7819 ISAELPQTPQRLASW-p Q8IWV7;T21-p ISAELPQTPQRLASW 0.313179859530122 0.202732452062101 0.187333333333333 0.162 9.43219041286281 9.11785991765641 0.187333333333333 0.162 0.113967483481352 0.122521980475502 1.88320758026847 1.82809998594662 Q8IWV7 UBR1 Q8IWV7.T21.p_UBR1 Q8IWV7_T21t _1_1_21_21 Q8IWV7 Q8IWV7|A0A087WTJ9|Q8IWV7-2|H3BNQ6 E3 ubiquitin-protein ligase UBR1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18048.18048.3 13.89 13.89 9.92 2 1 1 0 603.6319 1728.9152 T21t TMT10 12 (R) MEISAELPQtPQR (L) MEIS(0.0)AELPQT(0.99)PQR t:Phosphorylated T UBR1 203573.2 2 1 1745.1 118.06 HUMAN 1 9.4322 9.1179 ISAGTHTSPEAEKSQ-p Q5T1R4;S682-p ISAGTHTSPEAEKSQ 0.851878330458589 0.908286687383269 -0.0273333333333333 0.0123333333333334 1.34839437205703 0.585249188188547 -0.0273333333333333 0.0123333333333334 0.733095515417449 0.873926847238802 -0.359122473664661 0.166326147178491 Q5T1R4 HIVEP3 Q5T1R4.S682.p_HIVEP3 Q5T1R4_S682s _1_1_682_682 Q5T1R4 Q5T1R4 Transcription factor HIVEP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16833.16833.5 16.35 16.35 1.207 7 1 1 0 761.8072 3725.039 S682s TMT10 663 (K) KYYCSELQIAKPISAGTHTsPEAEK (S) KY(0.0)Y(0.0)CS(0.0)ELQIAKPIS(0.0)AGT(0.0)HT(0.0)S(0.99)PEAEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S HIVEP3 261285.6 1 22 465.1 303.46 HUMAN 1 -1.3484 0.5852 ISATSPQSPDLKSKG-p O15265-2;S905-p ISATSPQSPDLKSKG 0.957246455101486 0.304156305372348 0.00799999999999999 0.117333333333333 0.371479994689717 6.8263616608096 0.00799999999999999 0.117333333333333 0.918019699160112 0.207665252234331 0.107825026525566 1.43019783227207 O15265 ATXN7 O15265.2.S905.p_ATXN7 O15265-2_S905s _1_1_905_905 O15265-2 O15265-2 Isoform b of Ataxin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14266.14266.3 15.58 15.58 3.27 5 1 1 0 647.3421 1860.0479 S905s TMT10 896 (R) TGISATSPQsPDLK (S) T(0.0)GIS(0.0)AT(0.0)S(0.0)PQS(0.99)PDLK K:TMT10,s:Phosphorylated S ATXN7 102365.1 2 5 2096.1 97.83 HUMAN 1 0.3715 6.8264 ISCRWRGSALHFEVF-p Q9BRG2;S56-p ISCRWRGSALHFEVF 0.862029975440239 0.724856958779287 0.0283333333333333 -0.049 1.26183186920004 1.92430134580879 0.0283333333333333 -0.049 0.747853986565885 0.642051500714068 0.338325319658236 -0.491915668483242 Q9BRG2 SH2D3A Q9BRG2.S56.p_SH2D3A Q9BRG2_S56s _1_1_56_56 Q9BRG2 Q9BRG2 SH2 domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21035.21035.3 8.99 8.99 99 1 1 1 0 605.3073 1733.9437 S56s TMT10 53 (R) WRGsALHFEVFR (V) WRGS(1.0)ALHFEVFR s:Phosphorylated S SH2D3A 63662.5 1 1 1551.1 132.49 HUMAN 1 1.2618 -1.9243 ISDFLQKTPSKQPGS-p Q66K14;T397-p ISDFLQKTPSKQPGS 0.34842690082331 0.00184260569775099 -0.187 -0.852666666666667 8.50877951582978 43.0256798011377 -0.187 -0.852666666666667 0.140968490209098 4.98232461540952e-05 -1.7233268230595 -11.5797035813814 Q66K14 TBC1D9B Q66K14.T397.p_TBC1D9B Q66K14_T397t _1_1_397_397 Q66K14 Q66K14|Q66K14-2 TBC1 domain family member 9B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22072.22072.3 12.48 9.47 1.44 3 1 1 0 677.7211 1951.1831 T397t TMT10 390 (R) ISDFLQKtPSK (Q) IS(0.0)DFLQKT(0.99)PS(0.0)K K:TMT10,t:Phosphorylated T TBC1D9B 141663.3 2 3 988.1 191.79 HUMAN 1 -8.5088 -43.0257 ISDGKRESPLKIDPF-p J3KQV8;S1357-p ISDGKRESPLKIDPF 0.698770973809784 0.572389427280256 -0.0783333333333334 0.0546666666666667 2.92524521957125 3.26664140422832 -0.0783333333333334 0.0546666666666667 0.509888806455076 0.471341695351218 -0.705187427190303 0.773954539911193 J3KQV8 SYNJ1 J3KQV8.S1357.p_SYNJ1 J3KQV8_S1357s _1_1_1357_1357 J3KQV8 J3KQV8|O43426 Synaptojanin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.32835.32835.5 23.8 19.17 1.151 5 1 1 0 858.2763 4207.3784 S1357s TMT10 1347 (K) TNGISDGKREsPLKIDPFEDLSFNLLAVSK (A) T(0.0)NGIS(0.0)DGKRES(0.99)PLKIDPFEDLS(0.0)FNLLAVS(0.0)K K:TMT10,s:Phosphorylated S SYNJ1 178858.1 6 8 677.1 246.73 HUMAN 1 -2.9252 3.2666 ISDGVECSPPASPAR-p Q8N4S9;S116-p ISDGVECSPPASPAR 0.594811993936193 0.020379930359248 0.081 0.365666666666667 4.16197531360326 23.1532300223219 0.081 0.365666666666667 0.383532762547886 0.00483812403043616 0.947967439695827 4.5855644927771 Q8N4S9 MARVELD2 Q8N4S9.S116.p_MARVELD2 Q8N4S9_S116s _1_1_116_116 Q8N4S9 Q8N4S9|Q8N4S9-3|Q8N4S9-2 MARVEL domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9546.9546.4 14.88 14.88 14.882 4 1 1 0 630.5483 2439.2037 S116s TMT10 108 (R) YISDGVECsPPASPARPNHR (S) Y(0.0)IS(0.0)DGVECS(0.99)PPAS(0.0)PARPNHR C:Carbamidomethylation,s:Phosphorylated S MARVELD2 64623.4 3 3 1043.1 184.85 HUMAN 1 4.162 23.1532 ISDNSFSSDEEQSTG-p O60293;S1304-p ISDNSFSSDEEQSTG 0.699674004566978 0.0484918662407887 0.0533333333333333 0.233333333333333 2.91479836148101 17.5759905923155 0.0533333333333333 0.233333333333333 0.511116809121066 0.0174743464055512 0.703053112430785 3.37427574386161 O60293 ZFC3H1 O60293.S1304.p_ZFC3H1 O60293_S1303sS1304s_2_2_1303_1304 O60293 O60293|O60293-2 Zinc finger C3H1 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15488.15488.3 18.03 18.03 3.447 6 2 2 0 928.7628 2624.3456 S1303s S1304s Hydrogen 1295 (R) KPISDNSFssDEEQSTGPIK (Y) KPIS(0.0)DNS(0.0)FS(0.99)S(0.99)DEEQS(0.0)T(0.0)GPIK K:TMT10-Lys-Only,s:Phosphorylated S ZFC3H1 228291.3 13 26 311.1 371.67 HUMAN 1 2.9148 17.576 ISEDLKSSVG_____-p Q9H330-2;S877-p ISEDLKSSVG_____ 0.712174965944561 0.0824846851295459 -0.0826666666666667 -0.243666666666667 2.77368631845967 14.3542529944538 -0.0826666666666667 -0.243666666666667 0.527996894483782 0.0366922801344091 -0.674058256227621 -2.7564906332913 Q9H330 TMEM245 Q9H330.2.S877.p_TMEM245 Q9H330-2_S877s _1_1_877_877 Q9H330-2 Q9H330-2|Q9H330-3 Isoform 2 of Transmembrane protein 245 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16495.16495.2 7.21 7.21 1.466 3 1 1 0 844.4341 1607.8892 S877s TMT10 869 (R) DISEDLKSsVG (-) DIS(0.0)EDLKS(0.0)S(0.99)VG K:TMT10,s:Phosphorylated S TMEM245 97868.8 1 6 2319.1 87.95 HUMAN 1 -2.7737 -14.3543 ISEEIIGSPIPEPRQ-p Q86YS7-3;S643-p ISEEIIGSPIPEPRQ 0.896209621083732 0.306612943093344 0.021 0.101333333333333 0.932234139035069 6.78401930941485 0.021 0.100301206285216 0.806819871510758 0.209699825494029 0.256792615430959 1.42277041860226 Q86YS7 C2CD5 Q86YS7.3.S643.p_C2CD5 Q86YS7-3_S643s _1_1_643_643 Q86YS7-3 Q86YS7-5|Q86YS7-4|Q86YS7-3|Q86YS7-2 Isoform 3 of C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32954.32954.3 24.25 23.8 5.558 3 1 1 0 977.4936 2850.4974 S643s TMT10 627 (K) ELYEINPPEISEEIIGsPIPEPR (Q) ELY(0.0)EINPPEIS(0.0)EEIIGS(0.99)PIPEPR s:Phosphorylated S C2CD5 117622.7 4 10 349.1 351.16 HUMAN 1 0.9322 6.784 ISEEKGDSDDEKPRK-p Q9UKV3;S216-p ISEEKGDSDDEKPRK 0.39120743112417 0.0146709643539686 0.115666666666667 0.377333333333333 7.51474596631928 25.3932408747735 0.115666666666667 0.377333333333333 0.17722517071608 0.0028885235489877 1.55084938249614 5.13752290931531 Q9UKV3 ACIN1 Q9UKV3.S216.p_ACIN1 Q9UKV3_S216s _1_1_216_216 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7328.7328.2 17.59 13.16 4.073 5 1 1 0 1317.1506 2553.3247 S216s TMT10 206 (K) SSSISEEKGDsDDEKPR (K) S(0.0)S(0.0)S(0.0)IS(0.0)EEKGDS(0.99)DDEKPR K:TMT10,s:Phosphorylated S ACIN1 152258.2 24 3 32.2 899.18 HUMAN 1 7.5147 25.3932 ISEKSPRSPQLSDFG-p Q8IX90;S155-p ISEKSPRSPQLSDFG 0.118673427068097 0.00855566836817945 -0.295 -0.556333333333333 19.2564988446066 29.338099259891 -0.295 -0.556333333333333 0.0118672506575909 0.00116463563416164 -3.72117258023054 -6.22365998615173 Q8IX90 SKA3 Q8IX90.S155.p_SKA3 Q8IX90_S155s _1_1_155_155 Q8IX90 Q8IX90|Q8IX90-3 Spindle and kinetochore-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16083.16295.3 12.67 8.13 2.219 3 1 1 0 633.3175 1817.9707 S155s TMT10 152 (K) SPRsPQLSDFGLER (Y) S(0.0)PRS(0.99)PQLS(0.0)DFGLER s:Phosphorylated S SKA3 46872 2 4 966.1 193.88 HUMAN 1 -19.2565 -29.3381 ISELEDLSELEDLKD-p Q9H4L7-2;S152-p ISELEDLSELEDLKD 0.173715389634909 0.0272167778668687 -0.393 0.37 15.1399566911766 21.2320797787625 -0.393 0.37 0.0306199396843157 0.00752994878101223 -2.90474161816111 4.14431324609246 Q9H4L7 SMARCAD1 Q9H4L7.2.S152.p_SMARCAD1 Q9H4L7-2_S152s _1_1_152_152 Q9H4L7-2 Q9H4L7-2|D6RAY8 Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28465.28465.3 23.8 23.8 11.617 2 1 1 0 891.1078 2591.3452 S152s TMT10 141 (R) RNDDISELEDLsELEDLK (D) RNDDIS(0.0)ELEDLS(0.99)ELEDLK K:TMT10,s:Phosphorylated S SMARCAD1 118399.2 8 6 250.1 406.83 HUMAN 1 -15.14 21.2321 ISESSRQSLPSLKDS-p P46939;S833-p ISESSRQSLPSLKDS 0.176075571430546 0.44408385273888 -0.218666666666667 -0.0876666666666667 14.9880405863205 4.69398038401097 -0.218666666666667 -0.0876666666666667 0.0317099780473889 0.339314142756079 -2.8762084748305 -1.04746683420771 P46939 UTRN P46939.S833.p_UTRN P46939_S833s _1_1_833_833 P46939 P46939-2 Utrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11480.11480.4 12.44 12.68 1.136 7 1 1 0 574.5583 2215.2447 S833s TMT10 823 (K) HTSISESSRQsLPSLK (D) HT(0.0)S(0.0)IS(0.0)ES(0.0)S(0.0)RQS(0.99)LPS(0.0)LK K:TMT10,s:Phosphorylated S UTRN 396684.3 2 3 527.1 282.18 HUMAN 1 -14.988 -4.694 ISFAQKVTNAQDFGA-p Q9UP52;T285-p ISFAQKVTNAQDFGA 0.771982430720165 0.314189355223137 0.09 0.128333333333333 2.15047897252633 6.64562581631983 0.09 0.128333333333333 0.609469676646534 0.216489789605455 0.541874687349715 1.3984609026083 Q9UP52 TFR2 Q9UP52.T285.p_TFR2 Q9UP52_S279sT285tS305s_3_3_279_305 Q9UP52 Q9UP52 Transferrin receptor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.37914.37914.5 8.69 1.87 1.264 4 3 3 0 907.4232 4292.2643 S279s T285t N286n S305s Hydrogen 275 (R) VGVIsFAQKVtnAQDFGAQGVLIYPEPADFsQDPPK (P) VGVIS(0.99)FAQKVT(0.99)N(1.0)AQDFGAQGVLIY(0.0)PEPADFS(0.99)QDPPK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated TFR2 89038.7 1 1 6074.1 14.18 HUMAN 1 2.1505 6.6456 ISFPKQGS_______-p P49721;S201-p ISFPKQGS_______ 0.165681512882798 0.116971307587921 0.288666666666667 -0.173 15.6152368617585 12.2892901408463 0.288666666666667 -0.173 0.0274458265140821 0.0590297557078263 2.99465551539076 -2.38253153484896 P49721 PSMB2 P49721.S201.p_PSMB2 P49721_S201s _1_1_201_201 P49721 P49721|A0A087WVV1 Proteasome subunit beta type-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19468.19468.3 20.13 18.53 2.215 2 1 1 0 760.7183 2200.1763 S201s TMT10 186 (K) NGIHDLDNISFPKQGs (-) NGIHDLDNIS(0.0)FPKQGS(0.99) K:TMT10,s:Phosphorylated S PSMB2 23007 3 1 4153.1 36.56 HUMAN 1 15.6152 -12.2893 ISGHSRHSEGLREVP-p Q6P9B6;S446-p ISGHSRHSEGLREVP 0.599304429327995 0.31520680144833 0.073 0.104666666666667 4.10840788409357 6.62503206597555 0.073 0.104666666666667 0.38829268731561 0.217518797353873 0.93779595549162 1.39483894895298 Q6P9B6 TLDC1 Q6P9B6.S446.p_TLDC1 Q6P9B6_S440sS443sS446s_3_3_440_446 Q6P9B6 Q6P9B6 TLD domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26690.26690.4 11.12 11.12 11.116 4 3 3 0 989.4409 3714.8408 S440s S443s S446s TMT10 425 (K) SILDADPEAQALLEIsGHsRHsEGLREVPDDE (-) S(0.0)ILDADPEAQALLEIS(0.99)GHS(0.99)RHS(0.99)EGLREVPDDE s:Phosphorylated S TLDC1 51620.3 1 4 2898.1 66.6 HUMAN 1 4.1084 6.625 ISGMKRESEDDPESE-p P16383;S174-p ISGMKRESEDDPESE 0.523924502427807 0.392473557872435 -0.0966666666666667 -0.253 5.19358230252523 5.40032974924585 -0.0966666666666667 -0.253 0.302441769094334 0.288381253393637 -1.13941764174885 -1.1766867191852 P16383 GCFC2 P16383.S174.p_GCFC2 P16383_S174sS180s_2_2_174_180 P16383 P16383|P16383-4|P16383-3 GC-rich sequence DNA-binding factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4666.4666.4 14.57 14.57 99 2 2 2 0 633.7621 2372.089 S174s S180s TMT10 172 (K) REsEDDPEsEPDDHEK (R) RES(1.0)EDDPES(1.0)EPDDHEK K:TMT10,s:Phosphorylated S GCFC2 89953.6 2 5 2330.1 87.66 HUMAN 1 -5.1936 -5.4003 ISGQLVDSIAKTRDA-p P45985-2;S268-p ISGQLVDSIAKTRDA 0.0866557243462627 0.116672149591831 -0.361333333333333 -0.198 22.6927061872462 12.3055263578744 -0.361333333333333 -0.198 0.00537934478906221 0.0588094833682741 -4.48215677646519 -2.38542057502491 P45985 MAP2K4 P45985.2.S268.p_MAP2K4 P45985-2_S268s _1_1_268_268 P45985-2 P45985-2 Isoform 2 of Dual specificity mitogen-activated protein kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30400.30400.3 20.01 16.73 9.117 2 1 1 0 754.3938 2181.199 S268s TMT10 256 (K) LCDFGISGQLVDsIAK (T) LCDFGIS(0.0)GQLVDS(0.99)IAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP2K4 46096.9 4 3 2899.1 66.57 HUMAN 1 -22.6927 -12.3055 ISGQYSGSPQLLKNL-p Q96N67-6;S30-p ISGQYSGSPQLLKNL 0.97810171792329 0.0427356382720553 -0.00633333333333335 -0.314333333333333 0.190055075978267 18.3454566751628 -0.00633333333333336 -0.314333333333333 0.957181932511649 0.0146370761571025 -0.056222816857719 -3.52955983728692 Q96N67 DOCK7 Q96N67.6.S30.p_DOCK7 Q96N67-6_S30s _1_1_30_30 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3|Q96N67-4|Q96N67-7|A0A1B0GUE9 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18803.19031.3 14.69 9.73 1.243 4 1 1 0 682.0339 1964.1217 S30s TMT10 22 (K) QISGQYSGsPQLLK (N) QIS(0.0)GQY(0.0)S(0.0)GS(0.99)PQLLK K:TMT10,s:Phosphorylated S DOCK7 243551.1 3 1 345.1 352.4 HUMAN 1 -0.1901 -18.3455 ISGRRSRSASPSTQQ-p P55198;S220-p ISGRRSRSASPSTQQ 0.379392937735762 0.462399006354736 0.15 0.082 7.77481083928161 4.46743224156101 0.15 0.082 0.166924051084211 0.357484137544298 1.59607037781943 1.00530464888392 P55198 MLLT6 P55198.S220.p_MLLT6 P55198_S220sS222s_2_2_220_222 P55198 P55198|A0A087WW39|Q6P2C6 Protein AF-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4296.4296.2 11.71 11.71 4.572 4 2 2 0 726.3046 1291.6691 S220s S222s Hydrogen 220 (R) sAsPSTQQEK (H) S(0.99)AS(0.99)PS(0.0)T(0.0)QQEK K:TMT10-Lys-Only,s:Phosphorylated S MLLT6 113557.5 2 11 1008.1 189 HUMAN 1 7.7748 4.4674 ISGSNYKSLEVLVAD-p P98170;S406-p ISGSNYKSLEVLVAD 0.190635430939797 0.00752314179680432 -0.999 0.587 14.0741380973326 30.3407051794698 -0.999 0.587 0.039136879063591 0.000924548039580569 -2.70654054512913 6.52595831800269 P98170 XIAP P98170.S406.p_XIAP P98170_S406s _1_1_406_406 P98170 P98170 E3 ubiquitin-protein ligase XIAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37479.37479.3 19.63 17.99 99 1 1 1 0 679.7184 1957.1734 S406s TMT10 406 (K) sLEVLVADLVNAQK (D) S(1.0)LEVLVADLVNAQK K:TMT10,s:Phosphorylated S XIAP 57824.9 1 3 4303.1 33.99 HUMAN 1 -14.0741 30.3407 ISGSSKRSNEETDDY-p Q9NYV4-2;S154-p ISGSSKRSNEETDDY 0.307142145800385 0.127606567082616 0.149 0.211 9.58675350747197 11.7871769084002 0.149 0.211 0.109982768918955 0.066264711143072 1.90999599369815 2.29352107267436 Q9NYV4 CDK12 Q9NYV4.2.S154.p_CDK12 Q9NYV4-2_S154s _1_1_154_154 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5874.5874.2 9.68 9.68 5.514 3 1 1 0 733.7983 1386.6222 S154s Hydrogen 154 (R) sNEETDDYGK (A) S(0.99)NEET(0.0)DDY(0.0)GK K:TMT10-Lys-Only,s:Phosphorylated S CDK12 163853.1 2 4 59.1 708.76 HUMAN 1 9.5868 11.7872 ISGYLVDSVAKTIDA-p P52564;S207-p ISGYLVDSVAKTIDA 0.651457614591518 0.021045775789504 0.065 0.323666666666667 3.4881484774514 22.9317043511459 0.065 0.323666666666667 0.447904217955046 0.00509131027776382 0.817930527127455 4.53324321519777 P52564 MAP2K6 P52564.S207.p_MAP2K6 P52564_S207s _1_1_207_207 P52564 P46734-3|P52564|P46734-2|P52564-2 Dual specificity mitogen-activated protein kinase kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30317.30348.3 20.66 16.46 5.07 3 1 1 0 767.3739 2220.1445 S207s TMT10 195 (K) MCDFGISGYLVDsVAK (T) MCDFGIS(0.0)GY(0.0)LVDS(0.99)VAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP2K6 37834 5 3 4251.1 34.67 HUMAN 1 3.4881 22.9317 ISIEARKSPKLPRAA-p Q9NRJ4;S552-p ISIEARKSPKLPRAA 0.899476447657811 0.186724343238111 -0.0473333333333333 -0.361333333333333 0.900002879299281 9.58624883136626 -0.0473333333333333 -0.361333333333333 0.812829977271333 0.109995550315679 -0.248603622174791 -1.90917215829662 Q9NRJ4 TULP4 Q9NRJ4.S552.p_TULP4 Q9NRJ4_S552s _1_1_552_552 Q9NRJ4 Q9NRJ4|Q9NRJ4-2 Tubby-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5356.5356.3 8.03 2.22 99 1 1 1 0 455.2797 1283.8564 S552s Hydrogen 551 (R) KsPKLPR (A) KS(1.0)PKLPR K:TMT10-Lys-Only,s:Phosphorylated S TULP4 170594 2 3 2224.1 92.84 HUMAN 1 -0.9 -9.5862 ISINQMGSPGMGHLK-p Q86UU0;S926-p ISINQMGSPGMGHLK 0.911605742223265 0.0142751703668362 -0.0273333333333333 0.397333333333333 0.785378572634405 25.5888827800272 -0.0273333333333333 0.397333333333333 0.834568796103007 0.00276128810458424 -0.219141175656713 5.18781084219954 Q86UU0 BCL9L Q86UU0.S926.p_BCL9L Q86UU0_S926s _1_1_926_926 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20104.20104.5 17.61 17.61 4.492 4 1 1 0 556.2917 2697.458 S926s TMT10 913 (R) RPSDLTISINQMGsPGMGHLK (S) RPS(0.0)DLT(0.0)IS(0.0)INQMGS(0.99)PGMGHLK K:TMT10,s:Phosphorylated S BCL9L 157526.3 1 13 139.1 524.37 HUMAN 1 -0.7854 25.5889 ISIVRPFSIETKDST-p O75410;S153-p ISIVRPFSIETKDST 0.036930853563215 0.0446267912162327 -0.758666666666667 -0.379666666666667 32.7905223327672 18.0748560967317 -0.758666666666667 -0.379666666666667 0.000525954005275543 0.0155780965192453 -7.32817298853013 -3.47457110899404 O75410 TACC1 O75410.S153.p_TACC1 O75410_S153s _1_1_153_153 O75410 O75410|O75410-7|R4GMT7 Transforming acidic coiled-coil-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24851.24851.3 12.91 12.91 2.317 3 1 1 0 643.3728 1848.1359 S153s TMT10 146 (K) ISIVRPFsIETK (D) IS(0.0)IVRPFS(0.99)IET(0.0)K K:TMT10,s:Phosphorylated S TACC1 88648.6 1 7 442.1 311.73 HUMAN 1 -32.7905 -18.0749 ISKFLNRSPEESFDI-p Q96S38;S423-p ISKFLNRSPEESFDI 0.147090784109906 0.0908089639720797 -0.301333333333333 0.197666666666667 16.9007190162952 13.7815157510673 -0.301333333333333 0.197666666666667 0.0204139994329115 0.0418647425561074 -3.24310604458591 2.65133087702248 Q96S38 RPS6KC1 Q96S38.S423.p_RPS6KC1 Q96S38_S423s _1_1_423_423 Q96S38 Q96S38|Q96S38-2|F6RJM5|F5H7T0 Ribosomal protein S6 kinase delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21733.21733.3 17.06 9.51 3.511 2 1 1 0 707.3654 2040.1166 S423s TMT10 419 (K) FLNRsPEESFDIK (E) FLNRS(0.99)PEES(0.0)FDIK K:TMT10,s:Phosphorylated S RPS6KC1 119593.1 5 6 253.1 405.38 HUMAN 1 -16.9007 13.7815 ISKHDGGSPSIKAKV-p Q15648;S1401-p ISKHDGGSPSIKAKV 0.19929315148722 0.451183648603404 0.202666666666667 -0.0723333333333333 13.6395995774525 4.6078632238205 0.202666666666667 -0.0723333333333333 0.0432553710950957 0.346109625648447 2.62698329869293 -1.0314855991762 Q15648 MED1 Q15648.S1401.p_MED1 Q15648_S1401s _1_1_1401_1401 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15540.15540.4 16.07 13.08 2.728 3 1 1 0 555.575 2139.3105 S1401s TMT10 1392 (K) IIISKHDGGsPSIK (A) IIIS(0.0)KHDGGS(0.99)PS(0.0)IK K:TMT10,s:Phosphorylated S MED1 169445 6 23 115.1 566.87 HUMAN 1 13.6396 -4.6079 ISKKTVRSIQEAPVS-p Q5JTV8;S179-p ISKKTVRSIQEAPVS 0.301887758255495 0.00529828536418586 0.156 0.635 9.75087934607284 33.0614576924342 0.156 0.635 0.105903927246146 0.000494144801380012 1.93846036702577 7.40708724320544 Q5JTV8 TOR1AIP1 Q5JTV8.S179.p_TOR1AIP1 Q5JTV8_S179s _1_1_179_179 Q5JTV8 Q5JTV8|A0A0A0MSK5 Torsin-1A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19423.19423.3 12.92 12.92 1.103 3 1 1 0 741.0656 2141.2127 S179s TMT10 176 (K) TVRsIQEAPVSEDLVIR (L) T(0.0)VRS(0.99)IQEAPVS(0.0)EDLVIR s:Phosphorylated S TOR1AIP1 66418.4 2 8 585.1 265.22 HUMAN 1 9.7509 33.0615 ISLDNPDYQQDFFPK-p P00533;Y1172-p ISLDNPDYQQDFFPK 0.213516296888393 0.361822928209438 0.198666666666667 0.093 12.9268335647132 5.85626785190378 0.198666666666667 0.093 0.0509702358926527 0.259640965130273 2.49789104508169 1.25862354268273 P00533 EGFR P00533.Y1172.p_EGFR P00533_Y1172y _1_1_1172_1172 P00533 P00533 Epidermal growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20931.20931.3 19.46 13.36 8.244 3 1 1 0 925.4495 2694.3564 Y1172y TMT10 1161 (K) GSHQISLDNPDyQQDFFPK (E) GS(0.0)HQIS(0.0)LDNPDY(0.99)QQDFFPK K:TMT10,y:Phosphorylated Y EGFR 137698.3 1 9 521.2 283.33 HUMAN 1 12.9268 5.8563 ISLESSASLEGSLSK-p A0A0U1RR27;S1454-p ISLESSASLEGSLSK 0.84792985077906 0.465760636918768 -0.0356666666666667 -0.133 1.38689282349955 4.42523272163987 -0.0356666666666667 -0.133 0.726625638604526 0.360974669829714 -0.368295999765441 -0.997406992705286 A0A0U1RR27 NotFound A0A0U1RR27.S1454.p_NotFound A0A0U1RR27_S1454s _1_1_1454_1454 A0A0U1RR27 A0A0U1RR27|Q7Z401-2 C-myc promoter-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23986.23986.3 9.47 9.47 2.306 6 1 1 0 682.6968 1966.1109 S1454s TMT10 1447 (R) ISLESSAsLEGSLSK (F) IS(0.0)LES(0.0)S(0.0)AS(0.99)LEGS(0.0)LS(0.0)K K:TMT10,s:Phosphorylated S DENND4A 217514.7 1 13 399.1 328.24 HUMAN 1 -1.3869 -4.4252 ISLFYELSENDLNFI-p P13639;S82-p ISLFYELSENDLNFI 0.276378993270983 0.191914586260089 -0.327666666666667 0.142666666666667 10.5596420639088 9.42540679444846 -0.327666666666667 0.142666666666667 0.0879094966945487 0.114145638180815 -2.07912969430661 1.88132012241544 P13639 EEF2 P13639.S82.p_EEF2 P13639_S82s _1_1_82_82 P13639 P13639 Elongation factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36446.36446.4 18.86 18.86 1.208 6 1 1 0 829.4454 3234.7865 S82s TMT10 72 (K) STAISLFYELsENDLNFIKQSK (D) S(0.0)T(0.0)AIS(0.0)LFY(0.0)ELS(0.99)ENDLNFIKQS(0.0)K K:TMT10,s:Phosphorylated S EEF2 96306.4 2 4 693.1 242.75 HUMAN 1 -10.5596 9.4254 ISLKSIGSPESTPKN-p Q8NEY1;S760-p ISLKSIGSPESTPKN 0.409512605417896 0.162064535316848 0.111666666666667 -0.151666666666667 7.14599490231743 10.3917252112944 0.111666666666667 -0.151666666666667 0.19293033116434 0.0913750187054251 1.48654543155807 -2.04899090245254 Q8NEY1 NAV1 Q8NEY1.S760.p_NAV1 Q8NEY1_S760s _1_1_760_760 Q8NEY1 Q8NEY1|Q8NEY1-6 Neuron navigator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10398.10398.2 10.87 6.79 2.725 4 1 1 0 770.9058 1460.8361 S760s TMT10 757 (K) SIGsPESTPK (N) S(0.0)IGS(0.99)PES(0.0)T(0.0)PK K:TMT10,s:Phosphorylated S NAV1 203209.9 1 4 3927.1 40.57 HUMAN 1 7.146 -10.3917 ISLWSKSSFDGASLA-p Q96HH9;S72-p ISLWSKSSFDGASLA 0.145152146047681 0.46363675616598 -0.444 -0.0723333333333333 17.0966382011748 4.45138301277261 -0.444 -0.0723333333333333 0.0195135452522647 0.358807653987372 -3.2816928205179 -1.00230271456638 Q96HH9 GRAMD3 Q96HH9.S72.p_GRAMD3 Q96HH9_S72s _1_1_72_72 Q96HH9 Q96HH9-3|Q96HH9-2|Q96HH9-4 GRAM domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14498.14498.3 14.25 14.25 1.124 4 1 1 0 823.735 2389.2273 S72s TMT10 71 (K) SsFDGASLASDKNDCK (T) S(0.0)S(0.99)FDGAS(0.0)LAS(0.0)DKNDCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GRAMD2B 48324.7 6 6 735.1 235.43 HUMAN 1 -17.0966 -4.4514 ISLYDPRTPNAGGKA-p Q9UPT8;T1153-p ISLYDPRTPNAGGKA 0.896771225701303 0.251293960701026 0.0206666666666667 0.143666666666667 0.927874765692463 7.89941848199068 0.0206666666666667 0.143666666666667 0.807630150030196 0.162202727141076 0.255687418296011 1.61720162250674 Q9UPT8 ZC3H4 Q9UPT8.T1153.p_ZC3H4 Q9UPT8_T1153t_1_1_1153_1153 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27087.27087.4 23.1 20.17 1.77 6 1 1 0 935.234 3656.976 T1153t N1155n TMT10 1125 (R) VLAAGGLGQGGGGGQSSVLSGISLYDPRtPnAGGK (A) VLAAGGLGQGGGGGQS(0.0)S(0.0)VLS(0.0)GIS(0.0)LY(0.0)DPRT(0.99)PN(1.0)AGGK K:TMT10,t:Phosphorylated T,n:Deamidated ZC3H4 140881.7 1 7 427.1 318.7 HUMAN 1 0.9279 7.8994 ISNFKTPSKLSEKKK-p Q96KB5-2;S11-p ISNFKTPSKLSEKKK 0.292626971162687 0.0119565209762082 -0.201333333333333 -0.433666666666667 10.0668812005062 26.8560633242821 -0.201333333333333 -0.433666666666667 0.0984718007570176 0.0020624986244281 -1.99333244900713 -5.52217937331168 Q96KB5 PBK Q96KB5.2.S11.p_PBK Q96KB5-2_S11s _1_1_11_11 Q96KB5-2 Q96KB5-2 Isoform 2 of Lymphokine-activated killer T-cell-originated protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21425.21425.3 10.17 10.17 1.851 3 1 1 0 640.3308 1839.0086 S11s Acetyl 1 (-) MEGISNFKTPsK (L) MEGIS(0.0)NFKT(0.0)PS(0.99)K K:TMT10,s:Phosphorylated S PBK 37553.1 1 2 2474.1 81.89 HUMAN 1 -10.0669 -26.8561 ISNSDTPSPPPGLSK-p O95628-9;S298-p ISNSDTPSPPPGLSK 0.612076431940578 0.050124945718593 0.071 0.259333333333333 3.95299684974852 17.3740055256407 0.071 0.259333333333333 0.402439235231902 0.0183062524620916 0.908134204344047 3.33405460308618 O95628 CNOT4 O95628.9.S298.p_CNOT4 O95628-9_S298s _1_1_298_298 O95628-9 O95628-9|O95628-8|O95628-2 Isoform 9 of CCR4-NOT transcription complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25052.25052.5 30.06 30.06 1.222 11 1 1 0 969.2987 4762.499 S298s TMT10 266 (K) VTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPsPPPGLSK (S) VT(0.0)PLQS(0.0)PIDKPS(0.0)DS(0.0)LS(0.0)IGNGDNS(0.0)QQIS(0.0)NS(0.0)DT(0.0)PS(0.99)PPPGLS(0.0)K K:TMT10,s:Phosphorylated S CNOT4 78491.8 12 6 1032.1 185.91 HUMAN 1 3.953 17.374 ISNTSTQSLTAETKD-p P82094-2;S217-p ISNTSTQSLTAETKD 0.108727233162321 0.254844652993088 0.729 -0.132333333333333 20.1947297667 7.82143666814743 0.729 -0.132333333333333 0.0095615218832062 0.165141541127611 3.92086665779307 -1.60367221181414 P82094 TMF1 P82094.2.S217.p_TMF1 P82094-2_S217s _1_1_217_217 P82094-2 P82094-2|F8WF45 Isoform 2 of TATA element modulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17008.17008.3 14.75 14.75 1.108 10 1 1 0 856.756 2488.2853 S217s TMT10 205 (K) TTMESISNTSTQsLTAETK (D) T(0.0)T(0.0)MES(0.0)IS(0.0)NT(0.0)S(0.0)T(0.0)QS(0.99)LT(0.0)AET(0.0)K K:TMT10,s:Phosphorylated S TMF1 123666.4 1 8 393.1 331.84 HUMAN 1 20.1947 -7.8214 ISPEERRSPPAPGLQ-p P15408;S200-p ISPEERRSPPAPGLQ 0.791634956034985 0.281132378689907 -0.038 -0.120666666666667 1.95830938926883 7.26255011919261 -0.038 -0.120666666666667 0.637043459335909 0.187821363098861 -0.499549432995433 -1.50646550015582 P15408 FOSL2 P15408.S200.p_FOSL2 P15408_S200s _1_1_200_200 P15408 P15408|P15408-2|P15408-3 Fos-related antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11047.11047.4 15.05 15.05 2.439 2 1 1 0 582.553 2247.2229 S200s TMT10 193 (K) ISPEERRsPPAPGLQPMR (S) IS(0.0)PEERRS(0.99)PPAPGLQPMR s:Phosphorylated S FOSL2 35363.9 7 2 2212.1 93.37 HUMAN 1 -1.9583 -7.2626 ISPPLAQSPPEVPKQ-p Q9NZC9;S129-p ISPPLAQSPPEVPKQ 0.0386603595331013 0.0761735007025081 -0.604666666666667 -0.204666666666667 32.1904138607304 14.8390751918501 -0.604666666666667 -0.204666666666667 0.000603891078861198 0.0328165166786951 -7.12725380045662 -2.8464906706582 Q9NZC9 SMARCAL1 Q9NZC9.S129.p_SMARCAL1 Q9NZC9_S129s _1_1_129_129 Q9NZC9 Q9NZC9 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27317.27317.3 21.95 21.95 3.045 4 1 1 0 896.1518 2606.4628 S129s TMT10 115 (R) SQMALTGISPPLAQsPPEVPK (Q) S(0.0)QMALT(0.0)GIS(0.0)PPLAQS(0.99)PPEVPK K:TMT10,s:Phosphorylated S SMARCAL1 106506.6 1 3 1258.1 161.3 HUMAN 1 -32.1904 -14.8391 ISPPLAVSPPQVPQP-p Q8TDI0;S229-p ISPPLAVSPPQVPQP 0.202893185580468 0.600027831871944 -0.391333333333333 0.19 13.4265946231865 3.00644914082737 -0.391333333333333 0.19 0.0454297699570781 0.500443538164119 -2.58822866463573 0.721620480449106 Q8TDI0 CHD5 Q8TDI0.S229.p_CHD5 Q8TDI0_S229s _1_1_229_229 Q8TDI0 Q8TDI0|F2Z2R5 Chromodomain-helicase-DNA-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37252.37252.5 30.97 30.78 1.503 6 1 1 0 846.4762 4148.3847 S229s TMT10 203 (K) GSSAAAAAAAVAAAVETVTISPPLAVsPPQVPQPVPIRK (A) GS(0.0)S(0.0)AAAAAAAVAAAVET(0.0)VT(0.0)IS(0.0)PPLAVS(0.99)PPQVPQPVPIRK K:TMT10,s:Phosphorylated S CHD5 224643 1 2 1884.1 109.13 HUMAN 1 -13.4266 3.0064 ISPYFINTSKGQKCE-p P10809;T231-p ISPYFINTSKGQKCE 0.94894200602254 0.1011105901973 0.0103333333333333 0.194666666666667 0.450823798354628 13.1490124721986 0.0103333333333333 0.194666666666667 0.901400137877936 0.048428247444898 0.129817387824267 2.53654234711873 P10809 HSPD1 P10809.T231.p_HSPD1 P10809_T231t _1_1_231_231 P10809 P10809 60 kDa heat shock protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24351.24351.3 12.94 11.53 1.578 5 1 1 0 643.3376 1848.0308 T231t TMT10 222 (R) GYISPYFINtSK (G) GY(0.0)IS(0.0)PY(0.0)FINT(0.99)S(0.0)K K:TMT10,t:Phosphorylated T HSPD1 61224.7 4 4 1165.1 170.59 HUMAN 1 0.4508 13.149 ISQHIRKSWENPPPE-p Q5VWT5;S224-p ISQHIRKSWENPPPE 0.292782658195601 0.0686571383871892 0.194333333333333 0.376666666666667 10.0634973044835 15.472757283757 0.194333333333333 0.376666666666667 0.0985485570133245 0.0283611783940755 1.99274430890749 2.96558598548979 Q5VWT5 C1orf168 Q5VWT5.S224.p_C1orf168 Q5VWT5_S224s _1_1_224_224 Q5VWT5 Q5VWT5|Q5VWT5-2 FYN-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10258.10258.2 9.97 9.97 99 1 1 1 0 710.8282 1340.6796 S224s TMT10 224 (K) sWENPPPER (S) S(1.0)WENPPPER s:Phosphorylated S FYB2 82753.2 1 2 3578.1 47.86 HUMAN 1 10.0635 15.4728 ISQPGSKSPISQLDC-p H0YL70;S531-p ISQPGSKSPISQLDC 0.701611654046682 0.452015756264129 -0.0603333333333333 -0.0733333333333333 2.89411183798048 4.59538677864315 -0.0603333333333333 -0.0733333333333333 0.513557192734701 0.347105361629103 -0.698821918061051 -1.02916570454883 H0YL70 TLE3 H0YL70.S531.p_TLE3 H0YL70_S531s _1_1_531_531 H0YL70 H0YL70|H0YKN8|H0YKT5|Q04726|Q04726-4|A0A0D9SES8|Q04726-5|Q04726-6|Q04726-3|Q04726-7|Q04726-2|H0YNT2|F5H7D6|H0YNI7 Transducin-like enhancer protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27229.27229.3 14 10.19 1.169 4 1 1 0 984.8413 2872.5391 S531s TMT10 521 (K) IWDISQPGSKsPISQLDCLNR (D) IWDIS(0.0)QPGS(0.0)KS(0.99)PIS(0.0)QLDCLNR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TLE3 85275.2 3 11 447.1 309.48 HUMAN 1 -2.8941 -4.5954 ISRAEIISLCKRYPG-p Q9BXP5;S439-p ISRAEIISLCKRYPG 0.34301661373488 0.0520424423029536 0.150333333333333 0.276333333333333 8.6333926526282 17.1313767769129 0.150333333333333 0.276333333333333 0.136981126914682 0.0193580818720629 1.74490176516689 3.2860273822047 Q9BXP5 SRRT Q9BXP5.S439.p_SRRT Q9BXP5_S439s _1_1_439_439 Q9BXP5 Q9BXP5|Q9BXP5-3|Q9BXP5-2|Q9BXP5-4|Q9BXP5-5 Serrate RNA effector molecule homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21503.21503.2 10.56 10.56 99 1 1 1 0 736.4029 1391.8332 S439s TMT10 435 (R) AEIIsLCK (R) AEIIS(1.0)LCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SRRT 101121.1 1 9 321.1 364.45 HUMAN 1 8.6334 17.1314 ISRGSDDSVPVISFK-p Q96S38;S667-p ISRGSDDSVPVISFK 0.35983661529842 0.0811451621279137 -0.240666666666667 0.238 8.24945217175228 14.4608526521494 -0.240666666666667 0.238 0.149642440633007 0.0358026138782363 -1.6784084531673 2.77619962816204 Q96S38 RPS6KC1 Q96S38.S667.p_RPS6KC1 Q96S38_S667s _1_1_667_667 Q96S38 Q96S38|Q96S38-2|F6RJM5|F5H7T0|A0A087X1U5 Ribosomal protein S6 kinase delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23412.23412.3 9.48 9.48 2.317 3 1 1 0 596.9785 1708.9522 S667s TMT10 663 (R) GSDDsVPVISFK (D) GS(0.0)DDS(0.99)VPVIS(0.0)FK K:TMT10,s:Phosphorylated S RPS6KC1 119593.1 1 20 253.1 405.38 HUMAN 1 -8.2495 14.4609 ISRIRKDSGEENAHP-p Q8IYT4;S174-p ISRIRKDSGEENAHP 0.0416981743708974 0.00714533590153204 -0.791 -0.625666666666667 30.8070119723083 30.7095484456415 -0.791 -0.625666666666667 0.000830421916903584 0.000849268772515523 -6.68146624469288 -6.64008988296613 Q8IYT4 KATNAL2 Q8IYT4.S174.p_KATNAL2 Q8IYT4_S174s _1_1_174_174 Q8IYT4 Q8IYT4|Q8IYT4-2 Katanin p60 ATPase-containing subunit A-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4437.4437.4 13.21 13.21 99 1 1 1 0 512.5162 1967.0823 S174s TMT10 170 (R) IRKDsGEENAHPR (R) IRKDS(1.0)GEENAHPR K:TMT10,s:Phosphorylated S KATNAL2 61594.1 1 1 6202.1 13.21 HUMAN 1 -30.807 -30.7095 ISRKRVCSSDSDSSL-p Q9NSI6-2;S1904-p ISRKRVCSSDSDSSL 0.501862932993742 0.0739469982719304 0.102333333333333 -0.217666666666667 5.52172564967753 15.0114000910374 0.102333333333333 -0.217666666666667 0.280431913289396 0.0315398766784636 1.19886628929098 -2.87870931317571 Q9NSI6 BRWD1 Q9NSI6.2.S1904.p_BRWD1 Q9NSI6-2_S1904sS1905s_2_2_1904_1905 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14047.14047.4 8.12 8.12 8.116 5 2 2 0 661.336 2482.3902 S1904s S1905s TMT10 1901 (K) RVCssDSDSSLQVVKK (S) RVCS(0.99)S(0.99)DS(0.0)DS(0.0)S(0.0)LQVVKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRWD1 259915.1 2 32 208.1 444.81 HUMAN 2 5.5217 -15.0114 ISRPNSPSEGEGESS-p Q9P2R6;S681-p ISRPNSPSEGEGESS 0.378045476353578 0.526739898826826 -0.134 -0.101333333333333 7.80693785424947 3.74122563794627 -0.134 -0.0947747538630175 0.165693783390157 0.422549348278576 -1.60165064702184 -0.867189733206229 Q9P2R6 RERE Q9P2R6.S681.p_RERE Q9P2R6_S679sS681s_2_2_679_681 Q9P2R6 Q9P2R6|B1AKN3|Q9P2R6-2 Arginine-glutamic acid dipeptide repeats protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6913.6913.3 10.82 10.82 3.271 7 2 2 0 880.0342 2478.1542 S679s S681s TMT10 671 (K) TQEISRPNsPsEGEGESSDSR (S) T(0.0)QEIS(0.0)RPNS(0.99)PS(0.99)EGEGES(0.0)S(0.0)DS(0.0)R s:Phosphorylated S RERE 173561.6 1 14 278.1 389.04 HUMAN 1 -7.8069 -3.7412 ISRPRSDSAPPTPVN-p Q86X10;S359-p ISRPRSDSAPPTPVN 0.560135693219576 0.155926455475588 -0.122333333333333 0.266666666666667 4.64233155517571 10.612948652638 -0.122333333333333 0.266666666666667 0.343373554737102 0.0868370646791093 -1.03808587648126 2.08752829105579 Q86X10 RALGAPB Q86X10.S359.p_RALGAPB Q86X10_S359s _1_1_359_359 Q86X10 Q86X10|Q86X10-3|Q86X10-2|Q86X10-4 Ral GTPase-activating protein subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7306.7306.3 12.42 12.42 2.219 3 1 1 0 483.9032 1369.7273 S359s TMT10 357 (R) SDsAPPTPVNR (L) S(0.0)DS(0.99)APPT(0.0)PVNR s:Phosphorylated S RALGAPB 168564.2 1 2 1153.1 171.93 HUMAN 1 -4.6423 10.6129 ISRVRRKSQVNGEAG-p Q05D32;S104-p ISRVRRKSQVNGEAG 0.326502819643871 0.478790905788775 -0.190333333333333 -0.0743333333333333 9.09929100669935 4.26663024543327 -0.190333333333333 -0.0743333333333333 0.123046963072543 0.374400978807736 -1.82555213221952 -0.967593282303864 Q05D32 CTDSPL2 Q05D32.S104.p_CTDSPL2 Q05D32_S104s _1_1_104_104 Q05D32 Q05D32|Q05D32-2 CTD small phosphatase-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10453.10453.4 21.98 21.98 10.48 4 1 1 0 630.0533 2437.2182 S104s TMT10 104 (K) sQVNGEAGSYEMTNQHVK (Q) S(0.99)QVNGEAGS(0.0)Y(0.0)EMT(0.0)NQHVK K:TMT10,s:Phosphorylated S CTDSPL2 53168.9 20 5 899.1 203.79 HUMAN 1 -9.0993 -4.2666 ISSFKDKSISTSLPV-p Q14651;S546-p ISSFKDKSISTSLPV 0.255903152682223 0.189143187905412 0.183666666666667 0.339666666666667 11.2478808984482 9.51137029437725 0.183666666666667 0.339666666666667 0.0750260202870513 0.111908473197022 2.1995941937171 1.89620390959874 Q14651 PLS1 Q14651.S546.p_PLS1 Q14651_S546s_1_1_546_546 Q14651 Q14651 Plastin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.37715.37715.3 11.66 8.35 2.511 4 1 1 0 825.7878 2394.3805 S546s N563n TMT10 546 (K) sISTSLPVLDLIDAIAPnAVR (Q) S(0.99)IS(0.0)T(0.0)S(0.0)LPVLDLIDAIAPN(1.0)AVR s:Phosphorylated S,n:Deamidated PLS1 70651.6 1 8 3150.2 59.17 HUMAN 1 11.2479 9.5114 ISSLSQLSPPNDHKD-p Q68DA7-5;S619-p ISSLSQLSPPNDHKD 0.207422631751664 0.401977953907494 -0.321666666666667 0.0843333333333334 13.1854760261079 5.26455174159711 -0.321666666666667 0.0843333333333334 0.0480233439417961 0.297539634949381 -2.54454305020893 1.15208167403572 Q68DA7 FMN1 Q68DA7.5.S619.p_FMN1 Q68DA7-5_S619s _1_1_619_619 Q68DA7-5 Q68DA7|H0YM30|Q68DA7-5 Isoform 5 of Formin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20052.20263.5 17.46 17.46 1.63 4 1 1 0 529.8986 2565.4967 S619s TMT10 609 (K) KLNISSLSQLsPPNDHK (D) KLNIS(0.0)S(0.0)LS(0.0)QLS(0.99)PPNDHK K:TMT10,s:Phosphorylated S FMN1 132895.4 6 10 727.1 236.56 HUMAN 1 -13.1855 5.2646 ISSSDDSSDEDKLKI-p Q6PD62;S1021-p ISSSDDSSDEDKLKI 0.148266672319898 0.0201320943264057 -0.277666666666667 0.643 16.7631274435687 23.2340659257474 -0.277666666666667 0.643 0.0210711023019637 0.00474890418698733 -3.2161251809108 4.6047541501247 Q6PD62 CTR9 Q6PD62.S1021.p_CTR9 Q6PD62_S1020sS1021s_2_2_1020_1021 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15930.15930.3 12.77 12.77 3.598 5 2 2 0 696.3005 1926.9544 S1020s S1021s TMT10 1012 (K) AIISSSDDssDEDK (L) AIIS(0.0)S(0.0)S(0.0)DDS(0.99)S(0.99)DEDK K:TMT10,s:Phosphorylated S CTR9 134412.8 10 13 152.1 508.81 HUMAN 1 -16.7631 23.2341 ISSSSGATPTSKEQS-p P08047;T117-p ISSSSGATPTSKEQS 0.474773316010134 0.440554511985174 0.116 0.0913333333333333 5.95697434761472 4.74190036829083 0.116 0.0913333333333333 0.253689542488514 0.335590735668426 1.27689511516067 1.05633622074013 P08047 SP1 P08047.T117.p_SP1 P08047_T117t _1_1_117_117 P08047 P08047|P08047-2 Transcription factor Sp1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28913.28913.5 29.62 23.07 1.711 16 1 1 0 1126.5425 5548.6952 T117t TMT10 71 (R) IESPNENSNNSQGPSQSGGTGELDLTATQLSQGANGWQIISSSSGAtPTSK (E) IES(0.0)PNENS(0.0)NNS(0.0)QGPS(0.0)QS(0.0)GGT(0.0)GELDLT(0.0)AT(0.0)QLS(0.0)QGANGWQIIS(0.0)S(0.0)S(0.0)S(0.0)GAT(0.99)PT(0.0)S(0.0)K K:TMT10,t:Phosphorylated T SP1 81319.2 1 8 1269.1 160.02 HUMAN 1 5.957 4.7419 ISSVDGISLQGFPSE-p Q7Z3T8;S1405-p ISSVDGISLQGFPSE 0.632910858691293 0.930980441078259 -0.123666666666667 -0.0166666666666666 3.70227345440192 0.437410129536537 -0.123666666666667 -0.0166666666666666 0.426356270445795 0.90418851649972 -0.859773163796218 -0.12611103977482 Q7Z3T8 ZFYVE16 Q7Z3T8.S1405.p_ZFYVE16 Q7Z3T8_S1405s _1_1_1405_1405 Q7Z3T8 Q7Z3T8 Zinc finger FYVE domain-containing protein 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28116.28116.3 16.81 16.44 4.682 4 1 1 0 786.7516 2278.2695 S1405s TMT10 1396 (K) GVISSVDGIsLQGFPSEK (I) GVIS(0.0)S(0.0)VDGIS(0.99)LQGFPS(0.0)EK K:TMT10,s:Phosphorylated S ZFYVE16 171296.7 1 10 872.1 209.65 HUMAN 1 -3.7023 -0.4374 ISSVPTPSPLGPLAG-p P68400;S362-p ISSVPTPSPLGPLAG 0.845323173757714 0.90556974429772 0.028 -0.0126666666666666 1.41096265486702 0.601454152929377 0.028 -0.0126666666666666 0.722609612581796 0.870672013088777 0.37400827146194 -0.17066912216491 P68400 CSNK2A1 P68400.S362.p_CSNK2A1 P68400_S362s_1_1_362_362 P68400 P68400|P68400-2 Casein kinase II subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36177.36177.5 10.1 7.51 0 13 1 1 0 1134.9509 5574.7612 M352m S362s TMT10 334 (R) MGSSSMPGGSTPVSSANMmSGISSVPTPsPLGPLAGSPVIAAANPLGMPVPAAAGAQQ (-) M(0.0)GS(0.0)S(0.0)S(0.0)M(0.0)PGGS(0.0)T(0.0)PVS(0.0)S(0.0)ANM(0.50)M(0.50)S(0.0)GIS(0.0)S(0.0)VPT(0.0)PS(0.99)PLGPLAGS(0.0)PVIAAANPLGM(0.0)PVPAAAGAQQ m:Oxidized methionine,s:Phosphorylated S CSNK2A1 45256.9 35 8 2696.1 73.72 HUMAN 1 1.411 -0.6015 ISTSESRSPPEGDTT-p Q9BTC0;S1040-p ISTSESRSPPEGDTT 0.640615783875993 0.148486518183851 0.075 0.154333333333333 3.61179501648457 10.905194161577 0.075 0.154333333333333 0.43533190606187 0.0811858952057695 0.842156258785398 2.1385537181762 Q9BTC0 DIDO1 Q9BTC0.S1040.p_DIDO1 Q9BTC0_S1040s _1_1_1040_1040 Q9BTC0 Q9BTC0|Q9BTC0-1 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18393.18393.2 17.15 12.32 17.151 4 1 1 0 750.3426 1419.7114 S1040s Hydrogen 1040 (R) sPPEGDTTLFLSR (L) S(0.99)PPEGDT(0.0)T(0.0)LFLS(0.0)R s:Phosphorylated S DIDO1 245579.9 7 13 153.1 505.54 HUMAN 1 3.6118 10.9052 ISTSTGISPQMEVTC-p Q14008-3;S1911-p ISTSTGISPQMEVTC 0.64299937113816 0.0288624845095425 0.0813333333333333 -0.368333333333333 3.5850415864255 20.8477481836578 0.0813333333333334 -0.368333333333333 0.438021916815197 0.00822669093203447 0.836929527933141 -4.05928909433423 Q14008 CKAP5 Q14008.3.S1911.p_CKAP5 Q14008-3_S1911s_1_1_1911_1911 Q14008-3 Q14008-3|Q14008-2 Isoform 3 of Cytoskeleton-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29609.29609.4 20.69 18.88 1.102 15 1 1 0 1173.8126 4611.2643 S1911s N1931n TMT10 1904 (R) ISTSTGIsPQMEVTCVPTPTSTVSSIGnTNGEEVGPSVYLER (L) IS(0.0)T(0.0)S(0.0)T(0.0)GIS(0.99)PQMEVT(0.0)CVPT(0.0)PT(0.0)S(0.0)T(0.0)VS(0.0)S(0.0)IGN(0.99)T(0.0)N(0.0)GEEVGPS(0.0)VY(0.0)LER C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated CKAP5 228079.2 2 9 1323.1 154.15 HUMAN 1 3.585 -20.8477 ISTVKTLSPDQRVER-p A0A1B0GW41;S59-p ISTVKTLSPDQRVER 0.554346998867521 0.896137623211892 0.093 0.0186666666666667 4.73104153120573 0.668786905759727 0.093 0.0186666666666667 0.33643087636847 0.85727727099637 1.05453129763164 0.188583007280264 A0A1B0GW41 NotFound A0A1B0GW41.S59.p_NotFound A0A1B0GW41_S59s _1_1_59_59 A0A1B0GW41 A0A1B0GW41 Inhibitor of growth protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6636.6636.3 10.55 6.81 2.416 2 1 1 0 503.926 1429.7961 S59s TMT10 57 (K) TLsPDQRVER (L) T(0.0)LS(0.99)PDQRVER s:Phosphorylated S ING5 28803.1 1 1 2243.1 92 HUMAN 1 4.731 0.6688 ISVIRTLSTSDDVED-p Q96A65;S32-p ISVIRTLSTSDDVED 0.114688242267433 0.129263325795476 -0.441 -0.267666666666667 19.5822997536753 11.7096283529719 -0.441 -0.267666666666667 0.0110095615719467 0.0674585752830028 -3.78987529975117 -2.27982884320606 Q96A65 EXOC4 Q96A65.S32.p_EXOC4 Q96A65_S32s _1_1_32_32 Q96A65 Q96A65|Q96A65-2 Exocyst complex component 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9961.9961.3 12.58 12.58 1.146 4 1 1 0 759.3602 2196.1032 S32s TMT10 30 (R) TLsTSDDVEDRENEK (G) T(0.0)LS(0.99)T(0.0)S(0.0)DDVEDRENEK K:TMT10,s:Phosphorylated S EXOC4 111237.8 1 3 1685.1 121.05 HUMAN 1 -19.5823 -11.7096 ISVLEIHSQKAQIEE-p Q96T23;S524-p ISVLEIHSQKAQIEE 0.54267765903637 0.317295418639699 -0.147666666666667 0.104 4.89941172925557 6.58928410857572 -0.147666666666667 0.104 0.323637492065132 0.219316642731148 -1.08559213333886 1.3885488170705 Q96T23 RSF1 Q96T23.S524.p_RSF1 Q96T23_S524s _1_1_524_524 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17675.17675.3 13.83 13.83 6.839 4 1 1 0 723.0403 2087.1385 S524s TMT10 512 (K) DADSSISVLEIHsQK (A) DADS(0.0)S(0.0)IS(0.0)VLEIHS(0.99)QK K:TMT10,s:Phosphorylated S RSF1 165358.1 1 6 39.1 857.38 HUMAN 1 -4.8994 6.5893 ISVVRSATLETKPES-p P15260;T295-p ISVVRSATLETKPES 0.0767901617046939 0.00236864714219928 -0.534666666666667 -0.889666666666667 23.8921638867562 40.3218442601047 -0.534666666666667 -0.889666666666667 0.00408115990510699 9.28571978838789e-05 -4.76855780966208 -10.2770776338801 P15260 IFNGR1 P15260.T295.p_IFNGR1 P15260_T295t _1_1_295_295 P15260 P15260 Interferon gamma receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10067.10067.3 12.61 12.61 2.078 4 1 1 0 653.366 1878.1151 T295t TMT10 293 (R) SAtLETKPESK (Y) S(0.0)AT(0.99)LET(0.0)KPES(0.0)K K:TMT10,t:Phosphorylated T IFNGR1 55088.2 1 1 6282.1 12.61 HUMAN 1 -23.8922 -40.3218 ISWDGLDSGKLYTLV-p P30086;S60-p ISWDGLDSGKLYTLV 0.344082843193138 0.186934797461117 -0.151333333333333 -0.316 8.60500610017173 9.57951622857486 -0.151333333333333 -0.316 0.137879401629074 0.110166201957921 -1.73998741241548 -1.90800598340734 P30086 PEBP1 P30086.S60.p_PEBP1 P30086_S60s _1_1_60_60 P30086 P30086 Phosphatidylethanolamine-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16945.16945.3 10.85 10.85 10.854 4 1 1 0 724.3692 2091.1235 S60s TMT10 48 (K) NRPTSISWDGLDsGK (L) NRPT(0.0)S(0.0)IS(0.0)WDGLDS(0.99)GK K:TMT10,s:Phosphorylated S PEBP1 21170.5 1 4 3531.1 48.91 HUMAN 1 -8.605 -9.5795 ISYTPPESPVPSYAS-p P41212;S22-p ISYTPPESPVPSYAS 0.326712709573282 0.43910939708751 0.154 0.099 9.09244008722211 4.76163017513307 0.154 0.099 0.123241220682934 0.334069619549577 1.82436602854049 1.05998320393601 P41212 ETV6 P41212.S22.p_ETV6 P41212_T18tS22s_2_2_18_22 P41212 P41212 Transcription factor ETV6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.26470.26470.3 21.79 21.79 2.147 9 2 2 0 1023.1661 2907.5454 T18t S22s TMT10 15 (R) ISYtPPEsPVPSYASSTPLHVPVPR (A) IS(0.0)Y(0.0)T(0.99)PPES(0.99)PVPS(0.0)Y(0.0)AS(0.0)S(0.0)T(0.0)PLHVPVPR t:Phosphorylated T,s:Phosphorylated S ETV6 53284.3 2 7 2218.1 92.96 HUMAN 1 9.0924 4.7616 ITAQLKTTPTQPSEQ-p O95104;T237-p ITAQLKTTPTQPSEQ 0.152133482010063 0.0223894946661171 -0.687666666666667 0.484666666666667 16.4674928751982 22.5369982095406 -0.687666666666667 0.484666666666667 0.0225554093043382 0.00557571002047713 -3.1584764104931 4.44097462515727 O95104 SCAF4 O95104.T237.p_SCAF4 O95104_T237t _1_1_237_237 O95104 O95104|O95104-3|O95104-2 Splicing factor, arginine/serine-rich 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6545.6545.2 12.42 6.34 1.361 4 1 1 0 827.9269 1574.879 T237t TMT10 236 (K) TtPTQPSEQK (A) T(0.0)T(0.99)PT(0.0)QPS(0.0)EQK K:TMT10,t:Phosphorylated T SCAF4 126208.6 2 2 1368.1 149.4 HUMAN 1 -16.4675 22.537 ITASRSESPPPLSDP-p Q15059;S263-p ITASRSESPPPLSDP 0.583395195139055 0.269107575614107 0.0866666666666667 0.172 4.30651074377596 7.50725710047405 0.0866666666666667 0.172 0.370978657811583 0.177531037023381 0.975284462169182 1.54908623884714 Q15059 BRD3 Q15059.S263.p_BRD3 Q15059_S263s _1_1_263_263 Q15059 Q15059|Q15059-2 Bromodomain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12012.12012.5 18.48 16.39 1.102 11 1 1 0 736.7957 3599.9848 S263s TMT10 244 (K) RKADTTTPTTSAITASRSEsPPPLSDPK (Q) RKADT(0.0)T(0.0)T(0.0)PT(0.0)T(0.0)S(0.0)AIT(0.0)AS(0.0)RS(0.0)ES(0.99)PPPLS(0.0)DPK K:TMT10,s:Phosphorylated S BRD3 79825.3 13 2 1315.1 154.93 HUMAN 1 4.3065 7.5073 ITDHRNVSESPNRKN-p Q13427;S413-p ITDHRNVSESPNRKN 0.207422631751664 0.0254073082819033 0.19 0.397 13.1968674493074 21.7061613864615 0.19 0.397 0.0478975451048463 0.00675124488659339 2.5466026461796 4.2506397167939 Q13427 PPIG Q13427.S413.p_PPIG Q13427_S413s _1_1_413_413 Q13427 Q13427|E9PG73 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4095.4095.5 13.35 13.35 1.115 3 1 1 0 439.0334 2111.1722 S413s TMT10 406 (K) ITDHRNVsESPNRK (N) IT(0.0)DHRNVS(0.99)ES(0.0)PNRK K:TMT10,s:Phosphorylated S PPIG 89129.1 13 7 112.1 571.91 HUMAN 1 13.1969 21.7062 ITDPVVLSPKDRVRD-p P12268;S122-p ITDPVVLSPKDRVRD 0.528036159456772 0.0608722786586339 -0.110666666666667 -0.352666666666667 5.13209724570822 16.1941618724015 -0.110666666666667 -0.352666666666667 0.306754028885486 0.0240205978709545 -1.12821142355734 -3.1033348425149 P12268 IMPDH2 P12268.S122.p_IMPDH2 P12268_S122s _1_1_122_122 P12268 P12268 Inosine-5'-monophosphate dehydrogenase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24036.24036.3 21.93 19.2 6.431 3 1 1 0 863.4854 2508.4681 S122s TMT10 109 (K) KYEQGFITDPVVLsPK (D) KY(0.0)EQGFIT(0.0)DPVVLS(0.99)PK K:TMT10,s:Phosphorylated S IMPDH2 56260.4 5 2 1929.1 106.46 HUMAN 1 -5.1321 -16.1942 ITDRIAESLDMPKAS-p Q8TD90;S171-p ITDRIAESLDMPKAS 0.633029215389621 0.918800757559664 -0.1 -0.0216666666666667 3.70026021651997 0.518205012355033 -0.1 -0.0216666666666667 0.426553960173271 0.887522759320711 -0.859382154138586 -0.14822369478819 Q8TD90 MAGEE2 Q8TD90.S171.p_MAGEE2 Q8TD90_S171s _1_1_171_171 Q8TD90 Q8TD90 Melanoma-associated antigen E2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8889.8889.3 7.01 1.58 1.136 2 1 1 0 710.6931 2050.084 S171s Hydrogen 161 (R) GFQITDRIAEsLDMPK (A) GFQIT(0.0)DRIAES(0.99)LDMPK K:TMT10-Lys-Only,s:Phosphorylated S MAGEE2 60661.8 1 1 7290.1 7.01 HUMAN 1 -3.7003 -0.5182 ITEEQMDSDIVIPQD-p Q5UIP0;S1127-p ITEEQMDSDIVIPQD 0.982795908449026 0.0119548606841483 0.00333333333333333 0.394333333333333 0.149976779112942 26.8590792792336 0.00333333333333333 0.394333333333333 0.966056044291068 0.00206106682093519 0.0445602131808348 5.52299353612664 Q5UIP0 RIF1 Q5UIP0.S1127.p_RIF1 Q5UIP0_S1127s _1_1_1127_1127 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28841.28841.4 22.7 22.7 5.331 3 1 1 0 1008.9648 3952.8399 S1127s TMT10 1118 (K) MMITEEQMDsDIVIPQDVTEDCGMAEHLEK (S) MMIT(0.0)EEQMDS(0.99)DIVIPQDVT(0.0)EDCGMAEHLEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RIF1 276628.8 2 8 29.1 922.06 HUMAN 1 0.15 26.8591 ITELDPASFTEITKD-p Q86T82;S770-p ITELDPASFTEITKD 0.130049559279186 0.00662321225187447 -0.412333333333333 -0.536333333333333 18.3195248877669 31.3104635178341 -0.412333333333333 -0.536333333333333 0.0147247358022081 0.000739526341994224 -3.52722203715481 -6.82950546630169 Q86T82 USP37 Q86T82.S770.p_USP37 Q86T82_S770s _1_1_770_770 Q86T82 Q86T82|Q86T82-2 Ubiquitin carboxyl-terminal hydrolase 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28961.28961.3 14.62 10.82 1.152 5 1 1 0 735.3882 2124.184 S770s TMT10 762 (K) TITELDPAsFTEITK (D) T(0.0)IT(0.0)ELDPAS(0.99)FT(0.0)EIT(0.0)K K:TMT10,s:Phosphorylated S USP37 111080.6 1 5 1897.1 108.46 HUMAN 1 -18.3195 -31.3105 ITEVSCKSPQPDPVK-p P46013;S1983-p ITEVSCKSPQPDPVK 0.188528029303607 0.10232243509782 -0.423333333333333 -0.223333333333333 14.2227685599985 13.0758164239345 -0.423333333333333 -0.223333333333333 0.0378201410316531 0.049251374769711 -2.73391162765676 -2.52334352787205 P46013 MKI67 P46013.S1983.p_MKI67 P46013_S1983s _1_1_1983_1983 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15408.15408.3 12.64 8.09 1.406 3 1 1 0 818.1084 2372.3462 S1983s TMT10 1976 (K) ITEVSCKsPQPDPVK (T) IT(0.0)EVS(0.0)CKS(0.99)PQPDPVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MKI67 360912.4 5 66 5.1 1918.46 HUMAN 1 -14.2228 -13.0758 ITEVSCKSPQPESFK-p P46013;S2466-p ITEVSCKSPQPESFK 0.108085133456159 0.525423093619392 -0.667333333333333 -0.0696666666666667 20.3013114592299 3.75447171408911 -0.667333333333333 -0.0696666666666667 0.00932972524205517 0.421262526991289 -3.94391551873584 -0.869754943460129 P46013 MKI67 P46013.S2466.p_MKI67 P46013_S2466s _1_1_2466_2466 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16858.16858.4 16.52 15 2.437 4 1 1 0 626.833 2424.3412 S2466s TMT10 2459 (K) ITEVSCKsPQPESFK (T) IT(0.0)EVS(0.0)CKS(0.99)PQPES(0.0)FK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MKI67 360912.4 4 86 5.1 1918.46 HUMAN 1 -20.3013 -3.7545 ITGGNARSPEDQLGK-p Q9UK61;S927-p ITGGNARSPEDQLGK 0.234279051945656 0.0377832821591254 -0.232666666666667 0.269 12.0835113034473 19.1084059305807 -0.232666666666667 0.269 0.0618940454728266 0.0122788984302555 -2.34715594923086 3.68690802700369 Q9UK61 FAM208A Q9UK61.S927.p_FAM208A Q9UK61_S927s_1_1_927_927 Q9UK61 Q9UK61|Q9UK61-3|Q9UK61-2 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22451.22962.3 15.39 10.28 3.455 2 1 1 0 802.4337 2324.3338 N924n S927s TMT10 917 (K) LIPITGGnARsPEDQLGK (H) LIPIT(0.0)GGN(1.0)ARS(0.99)PEDQLGK K:TMT10,n:Deamidated,s:Phosphorylated S FAM208A 190568.5 13 10 246.1 411.17 HUMAN 1 -12.0835 19.1084 ITHQRVHTGEKPYKC-p P17040;T954-p ITHQRVHTGEKPYKC 0.338303322331957 0.00159168462790637 -0.191 -1.17033333333333 8.75755630609809 44.797297096195 -0.191 -1.17033333333333 0.133120325047687 3.31337270576629e-05 -1.76639560155981 -12.5148638209781 P17040 ZSCAN20 P17040.T954.p_ZSCAN20 P17040_T954t _1_1_954_954 P17040 P17040|P17040-3|P59923|Q9UJW7|Q9UJW7-2|Q9UJU3|Q9UJU3-2|Q8NHY6|B7Z6K7|Q9Y2L8|A0A087WVZ7|Q9HCG1|Q6ZN19|Q9NYT6|Q86WZ6|M0QZI7|Q08AN1|Q86WZ6-2|Q14586|Q14590|Q14590-2|P17035|A0A1W2PQ69|Q9NZL3|P52740|Q9UK10|Q14588|Q8N8Z8|P17020|Q02386|Q9H7R5-2|Q76KX8|A6NK53|Q08AG5|P17035-2|Q86YE8|Q76KX8-2|Q0VGE8|Q8N8Z8-2|P35789|Q86YE8-3|Q9UL59|Q09FC8|K7ENM7|K7EIK6|P35789-2|Q96NJ3|P52740-2|P0C7X5|Q9P2F9|Q86YE8-4|Q86YE8-2|A0A087WWD1|Q3KP31|Q14593|Q09FC8-6|P17022|P17022-2|Q3KP31-2|Q09FC8-2|Q09FC8-5|Q09FC8-4|Q8N8E2|P35789-3|Q9NV72|Q7L2R6|Q5VIY5|Q14593-2|P0CJ79|Q9UK12-2|Q9UK11|Q8N8E2-2|Q5VIY5-2|Q9NV72-2|Q96NJ3-2|B4DX44|Q6U7Q0|A0A1W2PPT3|P17028|A0A1W2PNY2|Q6AZW8|Q09FC8-3|Q8N3J9|Q8N8E2-3 Zinc finger and SCAN domain-containing protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7246.7246.4 12.44 12.44 9.538 2 1 1 0 457.2604 1746.0517 T954t TMT10 952 (R) VHtGEKPYK (C) VHT(0.99)GEKPY(0.0)K K:TMT10,t:Phosphorylated T ZSCAN20 119878.2 2 40 240.7 415.72 HUMAN 1 -8.7576 -44.7973 ITIRNSPYRREDSME-p P21127;Y67-p ITIRNSPYRREDSME 0.539743800473841 0.104097153399283 0.09 0.211 4.94756912537839 12.9801597268988 0.09 0.211 0.320068612706088 0.0503482091142563 1.09444104337139 2.50611992412109 P21127 CDK11B P21127.Y67.p_CDK11B P21127_Y67y_1_1_67_67 P21127 P21127|J3QR44|P21127-2|Q9UQ88-9|A0A087X1I0|A0A087WYI9|B7ZVY7|P21127-3|P21127-8|P21127-9|J3QR29|P21127-6 Cyclin-dependent kinase 11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16014.16014.5 11.15 11.15 4.931 6 1 1 0 964.6703 4738.3387 N64n Y67y TMT10 58 (R) MEITIRnSPyRREDSMEDRGEEDDSLAIKPPQQMSR (K) MEIT(0.0)IRN(1.0)S(0.0)PY(0.99)RREDS(0.0)MEDRGEEDDS(0.0)LAIKPPQQMS(0.0)R K:TMT10,n:Deamidated,y:Phosphorylated Y CDK11B 92876.5 1 3 421.1 320.22 HUMAN 1 4.9476 12.9802 ITKKSSPSVKPAVDP-p Q6FI81;S185-p ITKKSSPSVKPAVDP 0.275421456675328 0.0759283216859464 0.180666666666667 -0.234666666666667 10.599214118936 14.8602141608175 0.180666666666667 -0.234666666666667 0.0871121210131978 0.0326571727755735 2.08603443752038 -2.85043630399247 Q6FI81 CIAPIN1 Q6FI81.S185.p_CIAPIN1 Q6FI81_S185s _1_1_185_185 Q6FI81 Q6FI81|Q6FI81-3|H3BT65 Anamorsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13165.13165.3 13.47 11.03 1.162 3 1 1 0 731.4158 2112.2632 S185s TMT10 182 (K) SSPsVKPAVDPAAAK (L) S(0.0)S(0.0)PS(0.99)VKPAVDPAAAK K:TMT10,s:Phosphorylated S CIAPIN1 34152.3 1 4 2232.1 92.49 HUMAN 1 10.5992 -14.8602 ITLNPKYSLAYFNAG-p G3V3A5;S1748-p ITLNPKYSLAYFNAG 0.94478758147709 0.0804080974031953 -0.0123333333333333 0.598 0.486307252472971 14.5226579022683 -0.0123333333333333 0.598 0.894065372378691 0.0352967086191229 -0.139546243250946 2.78764695093995 G3V3A5 NotFound G3V3A5.S1748.p_NotFound G3V3A5_Y1747yS1748sY1751y_3_3_1747_1751 G3V3A5 G3V3A5|Q3SY87|G5E9W5|Q86TZ1-2 Tetratricopeptide repeat protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4624.4624.5 7.64 3.51 3.302 6 3 3 0 786.9665 3689.8905 Y1747y S1748s Y1751y N1753n TMT10 1736 (K) DYQDAITLNPKysLAyFnAGNIYFHHR (Q) DY(0.0)QDAIT(0.0)LN(0.0)PKY(0.99)S(0.99)LAY(0.99)FN(0.99)AGN(0.0)IY(0.0)FHHR K:TMT10,y:Phosphorylated Y,s:Phosphorylated S,n:Deamidated TTC6 218038 1 2 6180.1 13.39 HUMAN 1 -0.4863 14.5227 ITMTPPASPKSNINM-p Q12955;S1646-p ITMTPPASPKSNINM 0.194950907975575 0.258303919287561 -0.395666666666667 -0.152333333333333 13.8465911120528 7.74479039811056 -0.395666666666667 -0.152333333333333 0.0412421111912376 0.168081904447971 -2.66479534721923 -1.59036764419142 Q12955 ANK3 Q12955.S1646.p_ANK3 Q12955_S1646s _1_1_1646_1646 Q12955 Q12955 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15077.15077.3 10.94 10.94 3.219 5 1 1 0 585.6436 1674.9501 S1646s TMT10 1637 (R) SSITMTPPAsPK (S) S(0.0)S(0.0)IT(0.0)MT(0.0)PPAS(0.99)PK K:TMT10,s:Phosphorylated S ANK3 482683.6 1 15 135.1 530.51 HUMAN 1 -13.8466 -7.7448 ITNEKAHSILNFLKS-p Q86X53;S339-p ITNEKAHSILNFLKS 0.216176876680908 0.00799058412544102 -0.256 0.522666666666667 12.8195406975829 29.9045330610403 -0.256 0.522666666666667 0.0522451439648266 0.00102222546096823 -2.47859940677602 6.39303910427835 Q86X53 ERICH1 Q86X53.S339.p_ERICH1 Q86X53_S339s _1_1_339_339 Q86X53 Q86X53 Glutamate-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24650.24650.3 11.16 11.16 99 1 1 1 0 527.6372 1500.9303 S339s TMT10 337 (K) AHsILNFLK (S) AHS(1.0)ILNFLK K:TMT10,s:Phosphorylated S ERICH1 49211.7 1 2 2881.1 67.3 HUMAN 1 -12.8195 29.9045 ITPESILSALSKTQT-p Q5VT52;S523-p ITPESILSALSKTQT 0.209461411369469 0.0070640475405204 -0.188 0.623 13.1030938218056 30.8066363191096 -0.188 0.623 0.0489430035570151 0.000830493749301683 -2.52966058122818 6.67039935406196 Q5VT52 RPRD2 Q5VT52.S523.p_RPRD2 Q5VT52_S523s _1_1_523_523 Q5VT52 Q5VT52|Q5VT52-3|Q5VT52-2|Q5VT52-5 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.37108.37108.3 17.75 15.98 4.233 4 1 1 0 675.714 1945.1622 S523s TMT10 514 (K) VEITPESILsALSK (T) VEIT(0.0)PES(0.0)ILS(0.99)ALS(0.0)K K:TMT10,s:Phosphorylated S RPRD2 156473.2 1 9 172.1 488.65 HUMAN 1 -13.1031 30.8066 ITPLNSISPLKKNFA-p Q17RY0;S332-p ITPLNSISPLKKNFA 0.400967119654592 0.00150398419880163 -0.127 -0.946 7.32609519940061 45.5513241295128 -0.127 -0.946 0.185093206918222 2.78527183181458e-05 -1.5179823296401 -12.9340466679651 Q17RY0 CPEB4 Q17RY0.S332.p_CPEB4 Q17RY0_S332s _1_1_332_332 Q17RY0 Q17RY0|Q17RY0-2|B7ZLQ8 Cytoplasmic polyadenylation element-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20029.20029.4 17.42 11.65 1.138 3 1 1 0 658.894 2552.5855 S332s TMT10 319 (R) RGLNGGITPLNSIsPLKK (N) RGLNGGIT(0.0)PLNS(0.0)IS(0.99)PLKK K:TMT10,s:Phosphorylated S CPEB4 80778.1 4 4 1827.1 112.47 HUMAN 1 -7.3261 -45.5513 ITQEEDDSDEEVAPE-p Q92733;S267-p ITQEEDDSDEEVAPE 0.731017908627471 0.0162143805621306 -0.0596666666666667 0.372333333333333 2.58200675474509 24.7177848089123 -0.0596666666666667 0.372333333333333 0.551822398485809 0.00337459391531961 -0.634154785570864 4.96654576805962 Q92733 PRCC Q92733.S267.p_PRCC Q92733_S267s _1_1_267_267 Q92733 Q92733 Proline-rich protein PRCC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.29882.29882.2 23.96 18.42 6.587 3 1 1 0 1667.7659 3254.5629 S267s TMT10 259 (K) QITQEEDDsDEEVAPENFFSLPEK (A) QIT(0.0)QEEDDS(0.99)DEEVAPENFFS(0.0)LPEK K:TMT10,s:Phosphorylated S PRCC 52416.8 39 11 1101.1 177.58 HUMAN 1 -2.582 24.7178 ITQKERKSKSPPKVP-p Q7Z422-5;S36-p ITQKERKSKSPPKVP 0.102728705875057 0.019380298893346 -0.319666666666667 -0.346666666666667 20.8658258354989 23.5285757182311 -0.319666666666667 -0.346666666666667 0.00819251823003943 0.00443754150574043 -4.06727925385613 -4.67511332609811 Q7Z422 SZRD1 Q7Z422.5.S36.p_SZRD1 Q7Z422-5_S36sS38s_2_2_36_38 Q7Z422-5 Q7Z422|Q7Z422-5|Q7Z422-3|Q7Z422-4|Q7Z422-2 Isoform 5 of SUZ domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25403.25403.4 18.71 18.71 3.849 3 2 2 0 871.7287 3323.9658 S36s S38s TMT10 36 (K) sKsPPKVPIVIQDDSLPAGPPPQIR (I) S(0.99)KS(0.99)PPKVPIVIQDDS(0.0)LPAGPPPQIR K:TMT10,s:Phosphorylated S SZRD1 16909.7 10 6 1816.1 112.97 HUMAN 1 -20.8658 -23.5286 ITRQRILSIDRNLRN-p Q7L775;S156-p ITRQRILSIDRNLRN 0.0855767475245433 0.00479967872381982 -0.537 -1.27166666666667 22.8557114556802 33.8859664581494 -0.537 -1.27166666666667 0.00518118207590756 0.000408698792117923 -4.52040024559543 -7.69296659607732 Q7L775 EPM2AIP1 Q7L775.S156.p_EPM2AIP1 Q7L775_S156s _1_1_156_156 Q7L775 Q7L775 EPM2A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18395.18395.3 7.41 7.41 99 1 1 1 0 470.2679 1328.8212 S156s TMT10 154 (R) ILsIDRNLR (N) ILS(1.0)IDRNLR s:Phosphorylated S EPM2AIP1 70995.9 1 2 4884.1 25.48 HUMAN 1 -22.8557 -33.886 ITSDSENSNFRNEIQ-p P25445;S325-p ITSDSENSNFRNEIQ 0.49435709839469 0.427859015231282 -0.143666666666667 0.0776666666666667 5.63420273895631 4.90852897610363 -0.143666666666667 0.0776666666666667 0.273262304222498 0.322958784880432 -1.21911447619462 1.08705228895724 P25445 FAS P25445.S325.p_FAS P25445_S325s _1_1_325_325 P25445 P25445|P25445-6 Tumor necrosis factor receptor superfamily member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28696.28696.3 8.95 8.95 1.197 5 1 1 0 826.3837 2397.1731 S325s TMT10 317 (K) DITSDSENsNFRNEIQSLV (-) DIT(0.0)S(0.0)DS(0.0)ENS(0.99)NFRNEIQS(0.0)LV s:Phosphorylated S FAS 38929.7 2 4 2875.1 67.59 HUMAN 1 -5.6342 4.9085 ITSEEERSPAKRGRK-p Q12888-2;S1683-p ITSEEERSPAKRGRK 0.449985065789702 0.000952253650599092 -0.155333333333333 -1.42733333333333 6.40662790728698 54.0545672219931 -0.155333333333333 -1.42733333333333 0.228737415266603 3.93136419321611e-06 -1.35669210417694 -18.6922842602667 Q12888 TP53BP1 Q12888.2.S1683.p_TP53BP1 Q12888-2_S1683s _1_1_1683_1683 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8031.8031.4 14.91 9.86 2.156 3 1 1 0 514.2818 1974.1384 S1683s TMT10 1675 (K) LITSEEERsPAKR (G) LIT(0.0)S(0.0)EEERS(0.99)PAKR K:TMT10,s:Phosphorylated S TP53BP1 216167.2 11 74 3.1 2297.07 HUMAN 1 -6.4066 -54.0546 ITSNTDASDGDSVAL-p Q14789-2;S1138-p ITSNTDASDGDSVAL 0.755503298606435 0.165843518491649 0.0476666666666667 -0.144666666666667 2.32760506608521 10.2606365435088 0.0476666666666667 -0.144666666666667 0.585112657858812 0.0941751554296286 0.580189487587827 -2.0261869777506 Q14789 GOLGB1 Q14789.2.S1138.p_GOLGB1 Q14789-2_S1138s _1_1_1138_1138 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24058.24058.3 13.78 13.78 1.134 5 1 1 0 782.0735 2264.2386 S1138s TMT10 1130 (K) LITSNTDAsDGDSVALVK (E) LIT(0.0)S(0.0)NT(0.0)DAS(0.99)DGDS(0.0)VALVK K:TMT10,s:Phosphorylated S GOLGB1 378557.2 2 13 93.1 610.98 HUMAN 1 2.3276 -10.2606 ITSRENVSILAEDLE-p Q8WUM0;S480-p ITSRENVSILAEDLE 0.519206041782153 0.537397363294416 -0.141 0.111333333333333 5.2572847298508 3.62839959791293 -0.141 0.111333333333333 0.298037922203096 0.433670659271798 -1.15100475701833 0.845262509189961 Q8WUM0 NUP133 Q8WUM0.S480.p_NUP133 Q8WUM0_S480s _1_1_480_480 Q8WUM0 Q8WUM0 Nuclear pore complex protein Nup133 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.37059.37059.4 29.91 29.91 14.995 9 1 1 0 991.9902 3884.9727 S480s TMT10 477 (R) ENVsILAEDLEGSLASSVAGPNSESMIFETTTK (N) ENVS(0.99)ILAEDLEGS(0.0)LAS(0.0)S(0.0)VAGPNS(0.0)ES(0.0)MIFET(0.0)T(0.0)T(0.0)K K:TMT10,s:Phosphorylated S NUP133 130003.6 4 10 652.1 254.15 HUMAN 1 -5.2573 3.6284 ITVHDSESDDEEDSL-p Q6PIJ6;S600-p ITVHDSESDDEEDSL 0.512739424025493 0.731423780469014 0.089 0.0333333333333333 5.36197327707703 1.87250116062841 0.089 0.0333333333333333 0.290939489387313 0.649755379661724 1.16999735622615 0.480323157761373 Q6PIJ6 FBXO38 Q6PIJ6.S600.p_FBXO38 Q6PIJ6_S598sS600s_2_2_598_600 Q6PIJ6 Q6PIJ6|Q6PIJ6-2|Q6PIJ6-3 F-box only protein 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29709.29922.5 22.34 19.05 4.243 6 2 2 0 855.2231 4112.153 S598s S600s TMT10 587 (R) VVKPTSITVHDsEsDDEEDSLELQEVWIPK (N) VVKPT(0.0)S(0.0)IT(0.0)VHDS(0.99)ES(0.99)DDEEDS(0.0)LELQEVWIPK K:TMT10,s:Phosphorylated S FBXO38 135824.2 6 5 2435.1 83.55 HUMAN 1 5.362 1.8725 ITVKDGLSLQFKRFR-p Q6GYQ0-2;S1658-p ITVKDGLSLQFKRFR 0.198300279868763 0.00682046755728636 -0.534666666666667 0.557666666666667 13.6814627182594 31.0853744291082 -0.534666666666667 0.557666666666667 0.0428404208134238 0.000778865661375578 -2.63461841139032 6.75804435860216 Q6GYQ0 RALGAPA1 Q6GYQ0.2.S1658.p_RALGAPA1 Q6GYQ0-2_S1658s _1_1_1658_1658 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7|Q6GYQ0-4 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22461.22461.2 12.41 12.41 99 1 1 1 0 723.3953 1365.8142 S1658s TMT10 1655 (K) DGLsLQFK (R) DGLS(1.0)LQFK K:TMT10,s:Phosphorylated S RALGAPA1 236609.9 1 18 317.1 366.49 HUMAN 1 -13.6815 31.0854 ITVSKNTSLPPLWSP-p P49790-3;S203-p ITVSKNTSLPPLWSP 0.30062605052911 0.0668436902563529 0.144666666666667 -0.220333333333333 9.80417298343211 15.6268877471948 0.144666666666667 -0.220333333333333 0.104612288216871 0.0273722958445713 1.94770783753421 -2.9948169878493 P49790 NUP153 P49790.3.S203.p_NUP153 P49790-3_S203s _1_1_203_203 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23821.23821.2 12.17 8.81 1.51 3 1 1 0 953.4684 1825.9646 S203s TMT10 201 (K) NTsLPPLWSPEAER (S) NT(0.0)S(0.99)LPPLWS(0.0)PEAER s:Phosphorylated S NUP153 158989.2 4 4 64.1 696.53 HUMAN 1 9.8042 -15.6269 ITVVSPKSPHLHKDS-p Q86YA3;S880-p ITVVSPKSPHLHKDS 0.33341548273698 0.00227464949884667 -0.2 -0.817333333333333 8.90599558943035 40.8230840070307 -0.2 -0.817333333333334 0.128647230453265 8.27354435068899e-05 -1.79209024699217 -10.5078430421174 Q86YA3 ZGRF1 Q86YA3.S880.p_ZGRF1 Q86YA3_S877sS880s_2_2_877_880 Q86YA3 Q86YA3|Q86YA3-4|G3XAL8|Q86YA3-5|Q86YA3-6 Protein ZGRF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18258.18258.5 10.82 10.82 2.837 3 2 2 0 579.1365 2731.7157 S877s S880s TMT10 870 (R) KPFITVVsPKsPHLHK (D) KPFIT(0.0)VVS(0.99)PKS(0.99)PHLHK K:TMT10,s:Phosphorylated S ZGRF1 239050.7 2 2 4729.1 27.38 HUMAN 1 -8.906 -40.8231 IVADQTPTPTRFLKN-p P15336;T71-p IVADQTPTPTRFLKN 0.304996357941047 0.609050956217856 0.216666666666667 0.083 9.66412628603114 2.92605214432701 0.216666666666667 0.083 0.108040695537289 0.509794077257054 1.9234121556588 0.705254621688879 P15336 ATF2 P15336.T71.p_ATF2 P15336_T71t _1_1_71_71 P15336 P15336|P15336-5|E9PBF9|B8ZZU6|E9PEK8|P15336-7|P15336-3 Cyclic AMP-dependent transcription factor ATF-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15167.15167.3 17.73 17.73 1.157 4 1 1 0 817.7472 2371.2567 T71t TMT10 55 (K) FGPARNDSVIVADQTPtPTR (F) FGPARNDS(0.0)VIVADQT(0.0)PT(0.99)PT(0.0)R t:Phosphorylated T ATF2 54821.7 5 1 1174.1 169.92 HUMAN 1 9.6641 2.9261 IVCNMGHSNTEIDVT-p O43865;S400-p IVCNMGHSNTEIDVT 0.79813572883131 0.0601771269218472 0.0363333333333333 0.247666666666667 1.88723462527529 16.2605630709753 0.0363333333333333 0.247666666666667 0.647554815716732 0.0236561297142523 0.48368194638755 3.1161358975778 O43865 AHCYL1 O43865.S400.p_AHCYL1 O43865_S400s _1_1_400_400 O43865 O43865 S-adenosylhomocysteine hydrolase-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17775.17775.3 22.68 22.68 2.742 5 1 1 0 906.076 2636.2428 S400s TMT10 390 (K) NSCIVCNMGHsNTEIDVTSLR (T) NS(0.0)CIVCNMGHS(0.99)NT(0.0)EIDVT(0.0)S(0.0)LR C:Carbamidomethylation,s:Phosphorylated S AHCYL1 60034.4 1 4 2179.1 94.4 HUMAN 1 1.8872 16.2606 IVDGKVVSETNDTKV-p P05783;S420-p IVDGKVVSETNDTKV 0.506609842161293 0.225671825599469 0.148333333333333 -0.139333333333333 5.44628231210838 8.51543647912093 0.148333333333333 -0.139333333333333 0.285345986748723 0.140752576064724 1.18524946997938 -1.72389552089444 P05783 KRT18 P05783.S420.p_KRT18 P05783_S420s _1_1_420_420 P05783 P05783 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14701.14701.2 17.25 11.82 2.229 3 1 1 0 1136.6202 2192.2741 S420s TMT10 413 (R) IVDGKVVsETNDTK (V) IVDGKVVS(0.99)ET(0.0)NDT(0.0)K K:TMT10,s:Phosphorylated S KRT18 48057 12 26 89.1 623.62 HUMAN 1 5.4463 -8.5154 IVDNELWSEMRRHEM-p E7ETA6;S824-p IVDNELWSEMRRHEM 0.232365737282587 0.632652910279392 0.301333333333333 0.0603333333333334 12.1850723753652 2.70195562311872 0.301333333333333 0.0603333333333334 0.0604634275004188 0.536790026000926 2.36520489866566 0.659110193798766 E7ETA6 PCM1 E7ETA6.S824.p_PCM1 E7ETA6_S824s_1_1_824_824 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28176.28176.3 10.72 10.72 2.309 4 1 1 0 945.7679 2754.3242 N820n S824s TMT10 808 (K) SVFEPEDSSIVDnELWsEMRR (H) S(0.0)VFEPEDS(0.0)S(0.0)IVDN(1.0)ELWS(0.99)EMRR n:Deamidated,s:Phosphorylated S PCM1 229381.8 1 24 13.1 1159.95 HUMAN 1 12.1851 2.702 IVEHQNLSKKKKKQL-p Q9H501;S735-p IVEHQNLSKKKKKQL 0.932151691896397 0.0090322518183777 0.0183333333333333 -0.436666666666667 0.604694135226591 28.928338992698 0.0183333333333333 -0.436666666666667 0.870022704837767 0.00127987071127764 0.171552090772052 -6.10335758031929 Q9H501 ESF1 Q9H501.S735.p_ESF1 Q9H501_S735s _1_1_735_735 Q9H501 Q9H501 ESF1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9878.9878.3 9.43 9.43 99 1 1 1 0 535.9642 1525.9102 S735s TMT10 728 (K) IVEHQNLsK (K) IVEHQNLS(1.0)K K:TMT10,s:Phosphorylated S ESF1 99193.8 1 11 500.1 291.39 HUMAN 1 0.6047 -28.9283 IVEMKKGSNGYGFYL-p Q5T2W1;S250-p IVEMKKGSNGYGFYL 0.471941186312508 0.61002058974032 -0.11 -0.0753333333333333 6.01571822583946 2.91612157023007 -0.11 -0.0753333333333333 0.250281170513473 0.510961105734879 -1.28736318971038 -0.703226410615464 Q5T2W1 PDZK1 Q5T2W1.S250.p_PDZK1 Q5T2W1_S250s _1_1_250_250 Q5T2W1 Q5T2W1|A8MUH7|A8MUH7-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15482.15482.3 9.51 4.74 3.033 3 1 1 0 600.6477 1719.9583 S250s TMT10 248 (K) KGsNGYGFYLR (A) KGS(0.99)NGY(0.0)GFY(0.0)LR K:TMT10,s:Phosphorylated S PDZK1 57413.6 2 8 1301.1 156.33 HUMAN 1 -6.0157 -2.9161 IVEPLKFSPEKKKKR-p Q9UBS9-2;S1254-p IVEPLKFSPEKKKKR 0.1253599715366 0.0013036590626876 -0.317666666666667 -1.04433333333333 18.7592057186175 46.9682737353913 -0.317666666666667 -1.04433333333333 0.0133069776710165 2.00989155985086e-05 -3.61757705684495 -13.7579755721934 Q9UBS9 SUCO Q9UBS9.2.S1254.p_SUCO Q9UBS9-2_S1254s _1_1_1254_1254 Q9UBS9-2 Q9UBS9-2|B4DYM4|A0A087WV04 Isoform 2 of SUN domain-containing ossification factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30443.30443.3 22.02 22.02 7.777 2 1 1 0 1000.5391 2919.6322 S1254s TMT10 1239 (K) EVDPNDLYIVEPLKFsPEK (K) EVDPNDLY(0.0)IVEPLKFS(0.99)PEK K:TMT10,s:Phosphorylated S SUCO 157841.3 9 5 1071.1 180.72 HUMAN 1 -18.7592 -46.9683 IVFVPGCSIPLTIVK-p P54136;S370-p IVFVPGCSIPLTIVK 0.788958106914157 0.128799975574369 0.044 0.452666666666667 1.98448774845441 11.7342376611 0.044 0.452666666666667 0.633215045196416 0.0670774020699012 0.50536399430121 2.28417243006449 P54136 RARS P54136.S370.p_RARS P54136_S370s _1_1_370_370 P54136 P54136|P54136-2 Arginine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.36966.36966.3 11.96 11.96 4.014 2 1 1 0 727.7557 2101.2859 S370s TMT10 363 (K) IVFVPGCsIPLTIVK (S) IVFVPGCS(0.99)IPLT(0.0)IVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RARS 76176.4 2 4 2998.1 63.61 HUMAN 1 1.9845 11.7342 IVGKRNGSGVFISDI-p Q8NI35;S1555-p IVGKRNGSGVFISDI 0.441027182521617 0.0244949802808097 -0.133333333333333 0.305333333333333 6.54784459150081 21.9314607021187 -0.133333333333333 0.305333333333333 0.221419334365467 0.0064099394900217 -1.38160971860062 4.3017430003287 Q8NI35 INADL Q8NI35.S1555.p_INADL Q8NI35_S1555s _1_1_1555_1555 Q8NI35 Q8NI35|Q8NI35-5|A0A0U1RQT2|B4DE90 InaD-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20773.20773.3 16.46 16.46 6.563 2 1 1 0 644.0237 1850.09 S1555s TMT10 1552 (K) RNGsGVFISDIVK (G) RNGS(0.99)GVFIS(0.0)DIVK K:TMT10,s:Phosphorylated S PATJ 197163.3 2 21 127.1 542.92 HUMAN 1 -6.5478 21.9315 IVGTPVNSEDSDTRQ-p Q5QJE6;S236-p IVGTPVNSEDSDTRQ 0.560649548315649 0.148462728345989 0.0926666666666667 0.153666666666667 4.63100361443544 10.9062206004839 0.0926666666666667 0.153666666666667 0.34427036386876 0.0811667094877547 1.03598171499659 2.13873318399515 Q5QJE6 DNTTIP2 Q5QJE6.S236.p_DNTTIP2 Q5QJE6_S236s _1_1_236_236 Q5QJE6 Q5QJE6|J3KP30 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8969.8969.4 10.28 10.28 1.51 6 1 1 0 712.8511 2768.4125 S236s TMT10 228 (K) QIVGTPVNsEDSDTRQTSHLQAR (S) QIVGT(0.0)PVNS(0.99)EDS(0.0)DT(0.0)RQT(0.0)S(0.0)HLQAR s:Phosphorylated S DNTTIP2 84866.9 2 10 448.1 309.47 HUMAN 1 4.631 10.9062 IVHKKPISYAKSFPK-p A4D0T2;S104-p IVHKKPISYAKSFPK 0.862029975440239 0.76172764838597 -0.0483333333333333 0.0403333333333333 1.26101700218292 1.63317628596022 -0.0483333333333334 0.0403333333333333 0.747994319622664 0.686566124630377 -0.338128395264645 0.425895313083356 A4D0T2 C7orf66 A4D0T2.S104.p_C7orf66 A4D0T2_S104s _1_1_104_104 A4D0T2 A4D0T2 Uncharacterized protein C7orf66 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7856.7856.3 7.29 1.9 2.82 2 1 1 0 525.3195 1493.9659 S104s TMT10 101 (K) KPIsYAK (S) KPIS(0.99)Y(0.0)AK K:TMT10,s:Phosphorylated S C7orf66 13404.6 2 1 7209.1 7.29 HUMAN 1 -1.261 1.6332 IVHLRTHTGEKPYEC-p Q6ZMS4;T210-p IVHLRTHTGEKPYEC 0.785321801685938 0.0670575292395089 0.042 -0.288 2.0216226819021 15.6098299101337 0.042 -0.288 0.627823737236295 0.0274800177549255 0.513585230861918 -2.99157672843316 Q6ZMS4 ZNF852 Q6ZMS4.T210.p_ZNF852 Q6ZMS4_T210t _1_1_210_210 Q6ZMS4 Q9P0L1|P51523|Q9UJW8-4|P52742-4|Q86T29-2|P52742-3|A0A0A0MP75|Q8N9M3|Q2M3X9|Q2M3X9-2|Q6ZMS4|Q86TJ5|P51786|Q9UJW8-3|G5E9B8|Q9UJW8-2|P52742-2|C9J6L6|Q96I27-2 Zinc finger protein 852 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6575.6575.4 9.51 9.51 1.196 4 1 1 0 638.3061 2470.231 T210t TMT10 208 (R) THtGEKPYECSECGK (A) T(0.0)HT(0.99)GEKPY(0.0)ECS(0.0)ECGK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ZNF852 63680.3 1 85 240.6 415.72 HUMAN 1 2.0216 -15.6098 IVHVRIHSGDKPYEC-p Q15072;S207-p IVHVRIHSGDKPYEC 0.274349481664046 0.0101019318458942 -0.183666666666667 -0.526666666666667 10.6310419549756 28.0369196621555 -0.183666666666667 -0.526666666666667 0.0864760421430349 0.00157147701693589 -2.09158967295023 -5.84790495488844 Q15072 ZNF146 Q15072.S207.p_ZNF146 Q15072_S207s _1_1_207_207 Q15072 Q15072 Zinc finger protein OZF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10336.10336.4 14.98 14.98 6.202 2 1 1 0 633.5659 2451.2728 S207s TMT10 205 (R) IHsGDKPYECNVCGK (A) IHS(0.99)GDKPY(0.0)ECNVCGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF146 34448.3 1 1 5967.1 14.98 HUMAN 1 -10.631 -28.0369 IVKEVSTYIKKIGYN-p Q5VTE0;Y177-p IVKEVSTYIKKIGYN 0.115313884527732 0.00640256079200078 -0.531666666666667 0.479333333333333 19.5269777548716 31.5525267890886 -0.531666666666667 0.479333333333333 0.0111507023842227 0.000699434936077325 -3.77816205001323 6.90704700860854 Q5VTE0 NotFound Q5VTE0.Y177.p_NotFound Q5VTE0_Y177y _1_1_177_177 Q5VTE0 P68104|Q5VTE0|P68104-2|A0A087WVQ9|A0A087WV01 Putative elongation factor 1-alpha-like 3 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.15721.15764.2 16.49 7.39 2.69 3 1 1 0 689.3763 1297.7768 Y177y TMT10 173 (K) EVSTyIK (K) EVS(0.0)T(0.0)Y(0.99)IK K:TMT10,y:Phosphorylated Y EEF1A1P5 50526.4 2 4 26.1 67.85 HUMAN 1 -19.527 31.5525 IVKPFNLSQGKKRTF-p Q9ULW0;S310-p IVKPFNLSQGKKRTF 0.708335088412972 0.000952253650599092 -0.0866666666666667 -1.56333333333333 2.81475835470255 53.9553243420755 -0.0866666666666667 -1.56333333333333 0.523027067061947 4.02223615802601e-06 -0.682529767818379 -18.6126148676982 Q9ULW0 TPX2 Q9ULW0.S310.p_TPX2 Q9ULW0_S310s _1_1_310_310 Q9ULW0 Q9ULW0-2 Targeting protein for Xklp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21349.21349.3 15.82 15.82 15.824 2 1 1 0 772.7622 2236.3091 S310s TMT10 300 (K) GCTIVKPFNLsQGK (K) GCT(0.0)IVKPFNLS(0.99)QGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TPX2 86279.1 2 7 599.1 263.33 HUMAN 1 -2.8148 -53.9553 IVKPVKVSAPRVGGK-p P83731;S149-p IVKPVKVSAPRVGGK 0.147946322560902 0.0201520996919336 -0.328333333333333 -0.449333333333333 16.8425366674917 23.2266093948343 -0.328333333333333 -0.449333333333333 0.0206893255448725 0.00475706472512374 -3.23168504052319 -4.60298185046043 P83731 RPL24 P83731.S149.p_RPL24 P83731_S149s _1_1_149_149 P83731 P83731 60S ribosomal protein L24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13804.13804.3 10.73 10.73 99 1 1 1 0 654.4148 1881.2617 S149s TMT10 142 (K) IVKPVKVsAPR (V) IVKPVKVS(1.0)APR K:TMT10,s:Phosphorylated S RPL24 17892.7 2 5 2884.1 66.97 HUMAN 1 -16.8425 -23.2266 IVKSGYISESENSEI-p Q96QE3;S306-p IVKSGYISESENSEI 0.190631118670779 0.0150452882196435 0.277333333333333 -0.632 14.0785055371206 25.2160990139605 0.277333333333333 -0.632 0.039097541228848 0.00300877767932233 2.70734365033554 -5.09228950159246 Q96QE3 ATAD5 Q96QE3.S306.p_ATAD5 Q96QE3_S306s _1_1_306_306 Q96QE3 Q96QE3|A0A075B754|Q96QE3-2 ATPase family AAA domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14138.14138.2 18.33 14.7 2.413 6 1 1 0 1111.5126 2142.0512 S306s TMT10 302 (K) SGYIsESENSEISQQVR (F) S(0.0)GY(0.0)IS(0.99)ES(0.0)ENS(0.0)EIS(0.0)QQVR s:Phosphorylated S ATAD5 209620.3 2 25 316.2 367.51 HUMAN 1 14.0785 -25.2161 IVLQKYHTINGHNAE-p P22626;T176-p IVLQKYHTINGHNAE 0.295154464069677 0.00901683866038459 0.186 0.587333333333333 9.98513076313633 28.9462972962451 0.186 0.587333333333334 0.100342963610412 0.00127458930604037 1.97912726849609 6.10859144022368 P22626 HNRNPA2B1 P22626.T176.p_HNRNPA2B1 P22626_T176t _1_1_176_176 P22626 P22626|P22626-2|A0A087WUI2 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5208.5208.4 12.02 12.02 12.022 2 1 1 0 520.0237 1997.1081 T176t TMT10 174 (K) YHtINGHNAEVRK (A) Y(0.0)HT(0.99)INGHNAEVRK K:TMT10,t:Phosphorylated T HNRNPA2B1 37486.1 1 5 299.1 378.08 HUMAN 1 9.9851 28.9463 IVLRRHLSQDHTVPG-p Q8TEK3;S786-p IVLRRHLSQDHTVPG 0.221440669353428 0.343851432162861 0.306 0.152666666666667 12.6020994992873 6.14324878712084 0.306 0.152666666666667 0.0549275274849087 0.243038525275876 2.43960846112365 1.30972369285551 Q8TEK3 DOT1L Q8TEK3.S786.p_DOT1L Q8TEK3_S786s _1_1_786_786 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5074.5074.5 20.11 17.75 2.13 4 1 1 0 501.6529 2424.2694 S786s TMT10 784 (R) HLsQDHTVPGRPAASELHSR (A) HLS(0.99)QDHT(0.0)VPGRPAAS(0.0)ELHS(0.0)R s:Phosphorylated S DOT1L 185648.6 1 10 132.1 534.85 HUMAN 1 12.6021 6.1432 IVMQRNASVPNLRGS-p Q9H019;S103-p IVMQRNASVPNLRGS 0.335167066678141 0.0785988956465189 0.150666666666667 0.300666666666667 8.85400206621042 14.6628608945536 0.150666666666667 0.300666666666667 0.130196645063714 0.0341754239341974 1.78309023609937 2.81367072417019 Q9H019 MTFR1L Q9H019.S103.p_MTFR1L Q9H019_S103s _1_1_103_103 Q9H019 Q9H019|Q9H019-3|Q9H019-2|E9PLD2|E9PRK5 Mitochondrial fission regulator 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10322.10322.2 12.64 4.63 99 1 1 1 0 590.3082 1099.6421 S103s TMT10 101 (R) NAsVPNLR (G) NAS(1.0)VPNLR s:Phosphorylated S MTFR1L 32413.3 8 2 1618.1 127.17 HUMAN 1 8.854 14.6629 IVNKPHVSDEEEEEP-p P18583-5;S2129-p IVNKPHVSDEEEEEP 0.910489134781786 0.842193272973508 0.0186666666666667 0.0283333333333333 0.799025890538628 1.04813432393062 0.0186666666666667 0.0283333333333333 0.831950354139199 0.785573034717716 0.222677538517516 0.285880869274256 P18583 SON P18583.5.S2129.p_SON P18583-5_S2129s_1_1_2129_2129 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-2|J3QSZ5 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19097.19097.5 23.17 21.25 6.433 3 1 1 0 957.4753 4720.3774 Q2111q S2129s Hydrogen 2111 (K) qIAQSKEDDDVIVNKPHVsDEEEEEPPFYHHPFK (L) Q(1.0)IAQS(0.0)KEDDDVIVNKPHVS(0.99)DEEEEEPPFY(0.0)HHPFK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S SON 267429.6 4 38 45.1 778.56 HUMAN 1 0.799 1.0481 IVPTRDGTAPPPQSP-p Q9UKS6;T335-p IVPTRDGTAPPPQSP 0.53616137253053 0.310068290393145 0.154 0.192 5.01034097555104 6.71952352468274 0.154 0.192 0.315475692572825 0.212837254223835 1.10595281232087 1.41144791934623 Q9UKS6 PACSIN3 Q9UKS6.T335.p_PACSIN3 Q9UKS6_T335t _1_1_335_335 Q9UKS6 Q9UKS6 Protein kinase C and casein kinase substrate in neurons protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10891.10891.3 16.42 16.42 3.666 6 1 1 0 1116.49 3267.4875 T335t Hydrogen 333 (R) DGtAPPPQSPGSPGTGQDEEWSDEESPRK (A) DGT(0.99)APPPQS(0.0)PGS(0.0)PGT(0.0)GQDEEWS(0.0)DEES(0.0)PRK K:TMT10-Lys-Only,t:Phosphorylated T PACSIN3 48828.3 1 7 547.1 275.62 HUMAN 1 5.0103 6.7195 IVQIEQHSGASQHRI-p Q7Z7G8;S1812-p IVQIEQHSGASQHRI 0.980593512823283 0.29474471968201 -0.00466666666666668 -0.218333333333333 0.16959743103932 7.00457237782542 -0.00466666666666668 -0.218333333333333 0.961701419096702 0.199316275057152 -0.0502821687959587 -1.46140954164751 Q7Z7G8 VPS13B Q7Z7G8.S1812.p_VPS13B Q7Z7G8_S1812sS1815s_2_2_1812_1815 Q7Z7G8 Q7Z7G8|Q7Z7G8-6|Q7Z7G8-2 Vacuolar protein sorting-associated protein 13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9042.9042.3 8.03 8.03 99 2 2 2 0 660.3085 1818.9772 S1812s S1815s TMT10 1805 (R) IVQIEQHsGAsQHR (I) IVQIEQHS(1.0)GAS(1.0)QHR s:Phosphorylated S VPS13B 454589.9 1 18 766.1 229.13 HUMAN 1 -0.1696 -7.0046 IVQISGNSMPRGSGS-p Q9NWH9;S1014-p IVQISGNSMPRGSGS 0.225645828512172 0.574539349118887 0.204666666666667 0.063 12.4089533293139 3.24531443822402 0.204666666666667 0.063 0.0574254843723436 0.473662012819724 2.40508870243654 0.769699620091479 Q9NWH9 SLTM Q9NWH9.S1014.p_SLTM Q9NWH9_S1014s _1_1_1014_1014 Q9NWH9 Q9NWH9|Q9NWH9-3 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17364.17364.2 16.38 12.04 3.434 2 1 1 0 755.8875 1430.7987 S1014s TMT10 1007 (R) IVQISGNsMPR (G) IVQIS(0.0)GNS(0.99)MPR s:Phosphorylated S SLTM 117431.6 7 20 167.1 494.15 HUMAN 1 12.409 3.2453 IVQSVGVSSGKLLIK-p O95831;S375-p IVQSVGVSSGKLLIK 0.744000442558004 0.857382052214102 0.0546666666666667 -0.0223333333333333 2.44122980912568 0.942029638107781 0.0546666666666667 -0.0223333333333333 0.570002839431858 0.805002142411351 0.604440857523573 -0.259247946808117 O95831 AIFM1 O95831.S375.p_AIFM1 O95831_S375s _1_1_375_375 O95831 O95831 Apoptosis-inducing factor 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23820.23820.3 16.69 13.94 1.19 3 1 1 0 704.3832 2031.1673 S375s TMT10 363 (K) VMPNAIVQSVGVsSGK (L) VMPNAIVQS(0.0)VGVS(0.99)S(0.0)GK K:TMT10,s:Phosphorylated S AIFM1 67184.7 1 9 1056.1 182.66 HUMAN 1 2.4412 -0.942 IVRANSKSPLQRSLS-p A1XBS5;S243-p IVRANSKSPLQRSLS 0.374964180843313 0.00352917669002825 -0.142333333333333 -0.616666666666667 7.88765729705382 36.6321682050171 -0.142333333333333 -0.616666666666667 0.162642585765259 0.000217161673362085 -1.61566593782482 -8.71494100543469 A1XBS5 FAM92A1 A1XBS5.S243.p_FAM92A1 A1XBS5_S243s _1_1_243_243 A1XBS5 A1XBS5|A0A087WTS3|A1XBS5-3|A1XBS5-2|E5RFH7|E5RGP4 Protein FAM92A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5424.5424.3 7.82 2.94 1.365 2 1 1 0 513.6204 1458.8793 S243s TMT10 239 (R) ANSKsPLQR (S) ANS(0.0)KS(0.99)PLQR K:TMT10,s:Phosphorylated S FAM92A 33601.2 1 1 5955.1 15.03 HUMAN 1 -7.8877 -36.6322 IVRKIDQSEFEGFEY-p P41743;S577-p IVRKIDQSEFEGFEY 0.778630796398885 0.343881984312331 0.0603333333333333 -0.0966666666666667 2.08788930503544 6.14136121824657 0.0603333333333333 -0.0966666666666667 0.618316832493189 0.243144179775882 0.528178966279354 -1.3093886477763 P41743 PRKCI P41743.S577.p_PRKCI P41743_S577s_1_1_577_577 P41743 P41743 Protein kinase C iota type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34266.34266.3 10.61 10.61 6.373 3 1 1 0 1134.8746 3306.6314 S577s M590m TMT10 573 (R) KIDQsEFEGFEYINPLLmSAEECV (-) KIDQS(0.99)EFEGFEY(0.0)INPLLM(1.0)S(0.0)AEECV K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine PRKCI 69231.1 3 7 1048.1 184.27 HUMAN 1 2.0879 -6.1414 IVRLQILTPRAGLRL-p O15231-3;T290-p IVRLQILTPRAGLRL 0.697222520756474 0.0191457300895062 0.0646666666666667 -0.528666666666667 2.94224189681771 23.622260111107 0.0646666666666667 -0.528666666666667 0.507897190312814 0.00434284159614692 0.708656362726763 -4.6976426536233 O15231 ZNF185 O15231.3.T290.p_ZNF185 O15231-3_T290t _1_1_290_290 O15231-3 O15231-6|O15231-3|O15231-2 Isoform 3 of Zinc finger protein 185 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18895.18895.2 10.28 6.19 99 1 1 1 0 575.3341 1069.6931 T290t TMT10 286 (R) LQILtPR (A) LQILT(1.0)PR t:Phosphorylated T ZNF185 74524.1 1 9 166.1 494.62 HUMAN 1 2.9422 -23.6223 IVRQEPGSPPRDGLH-p O43593;S30-p IVRQEPGSPPRDGLH 0.725857849965914 0.683562286610145 -0.0483333333333333 0.0533333333333334 2.63918523971155 2.26206310155859 -0.0483333333333334 0.0533333333333334 0.544604814111826 0.594009909139225 -0.646123091122107 0.566017251611391 O43593 HR O43593.S30.p_HR O43593_S30s _1_1_30_30 O43593 O43593|O43593-2 Lysine-specific demethylase hairless HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19854.19854.4 17.01 15.24 99 1 1 1 0 804.8906 3136.5737 S30s TMT10 26 (R) QEPGsPPRDGLHHGPLCLGEPAPFWR (G) QEPGS(1.0)PPRDGLHHGPLCLGEPAPFWR C:Carbamidomethylation,s:Phosphorylated S HR 130059.7 2 1 3078.1 61.36 HUMAN 1 -2.6392 2.2621 IVRSPCGSPTGSPKS-p Q13191;S525-p IVRSPCGSPTGSPKS 0.885538071886065 0.052051676915512 -0.025 0.305333333333333 1.04205140576838 17.1296345316088 -0.025 0.305333333333334 0.786674113544258 0.0193658492498513 -0.284393570522207 3.28568363187013 Q13191 CBLB Q13191.S525.p_CBLB Q13191_S521sS525s_2_2_521_525 Q13191 Q13191|Q13191-2|Q13191-3 E3 ubiquitin-protein ligase CBL-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10709.10709.3 10.21 10.21 1.705 4 2 2 0 706.6785 1958.0894 S521s S525s TMT10 517 (K) GIVRsPCGsPTGSPK (S) GIVRS(0.99)PCGS(0.99)PT(0.0)GS(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CBLB 110931.2 3 5 2170.1 94.64 HUMAN 1 -1.0421 17.1296 IVRSQTFSPGARSQY-p Q9ULE0;S911-p IVRSQTFSPGARSQY 0.561745846486471 0.106373117431212 0.114666666666667 -0.240333333333333 4.61105722723819 12.8562772840159 0.114666666666667 -0.240333333333333 0.34585517412674 0.0518050708030361 1.0322743615041 -2.48385601212614 Q9ULE0 WWC3 Q9ULE0.S911.p_WWC3 Q9ULE0_S911s _1_1_911_911 Q9ULE0 Q9ULE0 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7171.7171.2 10.95 6.07 2.616 3 1 1 0 630.3029 1179.632 S911s TMT10 907 (R) SQTFsPGAR (S) S(0.0)QT(0.0)FS(0.99)PGAR s:Phosphorylated S WWC3 123814.7 1 24 161.1 495.35 HUMAN 1 4.6111 -12.8563 IVRSQTFSPGERNQY-p Q6AWC2-6;S1030-p IVRSQTFSPGERNQY 0.396926015285751 0.00448198400218091 0.185333333333333 -0.693333333333333 7.40589299107238 34.4715923997629 0.185333333333333 -0.693333333333334 0.181723336034697 0.000357141863221816 1.53189209646842 -7.90170041629559 Q6AWC2 WWC2 Q6AWC2.6.S1030.p_WWC2 Q6AWC2-6_S1030s _1_1_1030_1030 Q6AWC2-6 Q6AWC2-6 Isoform 6 of Protein WWC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10456.10456.3 16.77 10.13 1.115 4 1 1 0 718.0001 2072.0181 S1030s TMT10 1026 (R) SQTFsPGERNQYICR (L) S(0.0)QT(0.0)FS(0.99)PGERNQY(0.0)ICR C:Carbamidomethylation,s:Phosphorylated S WWC2 137930.4 1 7 1158.1 171.22 HUMAN 1 7.4059 -34.4716 IVSNSVVSEEEEEEA-p Q92794;S787-p IVSNSVVSEEEEEEA 0.538024352897839 0.86740165726671 0.128 0.0386666666666667 4.97791399164024 0.869466770124698 0.128 0.0386666666666667 0.317840035706168 0.818565285997136 1.10000915729739 0.240783908893533 Q92794 KAT6A Q92794.S787.p_KAT6A Q92794_S787s _1_1_787_787 Q92794 Q92794|A5PLL3 Histone acetyltransferase KAT6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25656.25656.4 29.89 27.86 3.334 4 1 1 0 1014.9414 3976.7716 S787s TMT10 776 (R) WTPVIVSNSVVsEEEEEEAEEGENEEPQCQER (E) WT(0.0)PVIVS(0.0)NS(0.0)VVS(0.99)EEEEEEAEEGENEEPQCQER C:Carbamidomethylation,s:Phosphorylated S KAT6A 227705.4 2 11 903.1 203.52 HUMAN 1 4.9779 0.8695 IVSRKRPSEGNYQKE-p Q9UKB1-3;S52-p IVSRKRPSEGNYQKE 0.0784735709064937 0.00205530259496525 -0.372 -1.04833333333333 23.5782105810028 41.8306456289974 -0.372 -1.04833333333333 0.00438711422347613 6.56047729967268e-05 -4.69246169439241 -10.9862081079685 Q9UKB1 FBXW11 Q9UKB1.3.S52.p_FBXW11 Q9UKB1-3_S52s _1_1_52_52 Q9UKB1-3 Q9UKB1|Q9UKB1-3|Q9UKB1-2 Isoform B of F-box/WD repeat-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5320.5320.4 8.07 5.23 4.237 2 1 1 0 494.2752 1894.1114 S52s TMT10 49 (R) KRPsEGNYQK (E) KRPS(0.99)EGNY(0.0)QK K:TMT10,s:Phosphorylated S FBXW11 61809.9 1 2 4031.1 38.87 HUMAN 1 -23.5782 -41.8306 IVSSPLNSPLDRSGI-p P49790-3;S338-p IVSSPLNSPLDRSGI 0.178495664330501 0.0225627720052641 -0.276333333333333 -0.324 14.7778729987154 22.4890255893054 -0.276333333333333 -0.324 0.0332822516588288 0.00563764131339655 -2.83689395949118 -4.42984262200921 P49790 NUP153 P49790.3.S338.p_NUP153 P49790-3_S338s _1_1_338_338 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27812.27812.4 22.03 22.03 3.113 6 1 1 0 866.9695 3384.8891 S338s TMT10 327 (K) RIPSIVSSPLNsPLDRSGIDITDFQAK (R) RIPS(0.0)IVS(0.0)S(0.0)PLNS(0.99)PLDRS(0.0)GIDIT(0.0)DFQAK K:TMT10,s:Phosphorylated S NUP153 158989.2 6 15 64.1 696.53 HUMAN 1 -14.7779 -22.489 IVSTKGKSATEYKNE-p J3QR07;S91-p IVSTKGKSATEYKNE 0.438590834495074 0.0175902595697002 0.111333333333333 0.974666666666667 6.59187356206214 24.1862572596873 0.111333333333333 0.974666666666667 0.219185915541188 0.0038139436663256 1.38936615966231 4.83480940306024 J3QR07 YTHDC1 J3QR07.S91.p_YTHDC1 J3QR07_S91s _1_1_91_91 J3QR07 J3QR07 YTH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7554.7554.4 11.75 11.75 2.089 4 1 1 0 618.3223 2390.2919 S91s TMT10 89 (K) GKsATEYKNEEYQR (S) GKS(0.99)AT(0.0)EY(0.0)KNEEY(0.0)QR K:TMT10,s:Phosphorylated S YTHDC1 85871.1 1 4 702.1 239.92 HUMAN 1 6.5919 24.1863 IVTKYVESDDEKPLD-p P46100;S92-p IVTKYVESDDEKPLD 0.716278239111013 0.131895871226618 -0.0496666666666667 0.185 2.73438581423113 11.5984848856711 -0.0496666666666667 0.185 0.532796567884834 0.0692072370689006 -0.665926680092001 2.26022904312577 P46100 ATRX P46100.S92.p_ATRX P46100_S92s_1_1_92_92 P46100 P46100|P46100-4|P46100-6|A0A087WWG0 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22399.22399.4 22.94 18.18 0 7 1 1 0 1185.55 4658.203 S92s N114n TMT10 89 (K) YVEsDDEKPLDDETVNEDASNENSEnDITMQSLPK (G) Y(0.0)VES(0.99)DDEKPLDDET(0.0)VN(0.0)EDAS(0.0)N(0.33)EN(0.33)S(0.0)EN(0.33)DIT(0.0)MQS(0.0)LPK K:TMT10,s:Phosphorylated S,n:Deamidated ATRX 285034.2 9 5 18.1 1035.36 HUMAN 1 -2.7344 11.5985 IVVAAVPSPIPVQRT-p Q2KHR2;S269-p IVVAAVPSPIPVQRT 0.27306154975907 0.821847802742782 -0.219666666666667 0.0253333333333333 10.6762078781909 1.19284661315572 -0.219666666666667 0.0253333333333333 0.0855813656101575 0.759828079125785 -2.09947566145238 0.32154360363007 Q2KHR2 RFX7 Q2KHR2.S269.p_RFX7 Q2KHR2_S269s_1_1_269_269 Q2KHR2 H0YLX2|Q2KHR2|Q2KHR2-2 DNA-binding protein RFX7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30865.30865.5 15.05 9.16 0 8 1 1 0 929.9084 4564.5503 N251n S269s TMT10 235 (K) KSESATSNGVTNLPNGnPSILSPQPIGIVVAAVPsPIPVQR (T) KS(0.0)ES(0.0)AT(0.0)S(0.0)N(0.0)GVT(0.0)N(0.0)LPN(0.50)GN(0.50)PS(0.0)ILS(0.0)PQPIGIVVAAVPS(0.99)PIPVQR K:TMT10,n:Deamidated,s:Phosphorylated S RFX7 147863 1 4 511.1 287.25 HUMAN 1 -10.6762 1.1928 IWEEKQGTQEGAAVP-p O95396;T400-p IWEEKQGTQEGAAVP 0.745612613783748 0.00402703761508703 0.0643333333333333 0.588 2.41974399117244 35.3048417174577 0.0643333333333333 0.588 0.572829797282346 0.000294792091428611 0.599873885698082 8.20711614359476 O95396 MOCS3 O95396.T400.p_MOCS3 O95396_T400t _1_1_400_400 O95396 O95396 Adenylyltransferase and sulfurtransferase MOCS3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25177.25177.3 17.14 17.14 14.652 2 1 1 0 758.0648 2192.2149 T400t TMT10 398 (K) QGtQEGAAVPIYVICK (L) QGT(0.99)QEGAAVPIY(0.0)VICK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MOCS3 50581.2 1 2 3611.1 47.04 HUMAN 1 2.4197 35.3048 IWHNNEKSFLIWVNE-p P12532-2;S288-p IWHNNEKSFLIWVNE 0.826258184730569 0.953118976700446 0.034 0.00633333333333336 1.59895094188593 0.296298800878057 0.034 0.00633333333333335 0.691998106028302 0.934049989536944 0.418033921621643 0.0866628709685274 P12532 CKMT1B P12532.2.S288.p_CKMT1B P12532-2_S288s _1_1_288_288 P12532-2 P12532-2|F8WCN3 Isoform 2 of Creatine kinase U-type, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25356.25356.3 13.99 13.99 13.986 2 1 1 0 652.3147 1874.9598 S288s TMT10 288 (K) sFLIWVNEEDHTR (V) S(0.99)FLIWVNEEDHT(0.0)R s:Phosphorylated S CKMT1A 50933.3 1 5 1688.1 120.83 HUMAN 1 1.599 0.2963 IWLKDCRTPLGASLD-p P28290;T87-p IWLKDCRTPLGASLD 0.864814930528531 0.823818505791644 -0.029 0.028 1.22703439710904 1.17964691241817 -0.029 0.028 0.753870172255418 0.762140970649975 -0.32989654180576 0.318320971536652 P28290 SSFA2 P28290.T87.p_SSFA2 P28290_T87tS92s_2_2_87_92 P28290 P28290|P28290-3|E9PHV5 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16557.16557.3 14.15 14.15 3.037 6 2 2 0 895.0865 2523.3125 T87t S92s TMT10 84 (K) DCRtPLGAsLDEQSSSTLK (G) DCRT(0.99)PLGAS(0.99)LDEQS(0.0)S(0.0)S(0.0)T(0.0)LK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S SSFA2 139638.7 3 33 73.1 652.35 HUMAN 1 -1.227 1.1796 IWSVSTPSPIKSTLG-p Q12955;S1547-p IWSVSTPSPIKSTLG 0.538659416854896 0.00917359434218356 0.103666666666667 -0.492666666666667 4.96704974372702 28.8059445229588 0.103666666666667 -0.492666666666667 0.318636135080253 0.0013164535734062 1.09801631003815 -6.0677796174228 Q12955 ANK3 Q12955.S1547.p_ANK3 Q12955_S1547s _1_1_1547_1547 Q12955 Q12955 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24525.24525.3 12.62 9.38 1.803 5 1 1 0 614.0062 1760.0358 S1547s TMT10 1539 (K) SIWSVSTPsPIK (S) S(0.0)IWS(0.0)VS(0.0)T(0.0)PS(0.99)PIK K:TMT10,s:Phosphorylated S ANK3 482683.6 1 13 135.1 530.51 HUMAN 1 4.967 -28.8059 IWTHPGWSPLKTLAG-p O43172;S483-p IWTHPGWSPLKTLAG 0.805849002798241 0.424037546319303 -0.0373333333333333 -0.094 1.8082020766923 4.95988858097606 -0.0373333333333334 -0.0939999999999999 0.659446841254586 0.3191619735624 -0.465895239168201 -1.0964822060808 O43172 PRPF4 O43172.S483.p_PRPF4 O43172_S483s _1_1_483_483 O43172 O43172|O43172-2 U4/U6 small nuclear ribonucleoprotein Prp4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23571.23571.3 14.77 14.77 6.376 2 1 1 0 620.6722 1780.031 S483s TMT10 476 (K) IWTHPGWsPLK (T) IWT(0.0)HPGWS(0.99)PLK K:TMT10,s:Phosphorylated S PRPF4 59132.8 3 1 5996.1 14.77 HUMAN 1 -1.8082 -4.9599 IYHPNINSNGSICLD-p P61077-3;S82-p IYHPNINSNGSICLD 0.508446486193717 0.604897225668948 -0.0926666666666667 0.0493333333333334 5.42188903241092 2.9625705320039 -0.0926666666666667 0.0493333333333334 0.286953216221928 0.50552535961382 -1.18084041790072 0.712700329521184 P61077 UBE2D3 P61077.3.S82.p_UBE2D3 P61077-3_S82s _1_1_82_82 P61077-3 P61077-3|P61077-2|A0A087WY85|P51668|P62837|D6RAH7|A0A087WW00|A0A0A0MQU3|Q9Y2X8|H9KV45|C9J9H9|P62837-2 Isoform 3 of Ubiquitin-conjugating enzyme E2 D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25345.25345.3 17.79 17.79 3.452 3 1 1 0 803.4066 2328.2332 S82s TMT10 75 (R) IYHPNINsNGSICLDILR (S) IY(0.0)HPNINS(0.99)NGS(0.0)ICLDILR C:Carbamidomethylation,s:Phosphorylated S UBE2D3 17178.3 2 1 5565.1 18.14 HUMAN 1 -5.4219 2.9626 IYISNTFSPSKAEGD-p Q92925;S203-p IYISNTFSPSKAEGD 0.871756450424755 0.990322139872085 -0.0256666666666667 0.0016666666666667 1.16712488906248 0.0637963295296621 -0.0256666666666667 0.0016666666666667 0.764341624614518 0.985417718770716 -0.315290084081602 0.0191351479934823 Q92925 SMARCD2 Q92925.S203.p_SMARCD2 Q92925_S203s _1_1_203_203 Q92925 Q92925|Q92925-2|B9EGA3|Q92925-3|J3KMX2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22557.22557.2 16.89 12.25 1.161 5 1 1 0 897.9754 1714.978 S203s TMT10 196 (R) IYISNTFsPSK (A) IY(0.0)IS(0.0)NT(0.0)FS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S SMARCD2 59148.1 8 2 1828.1 112.46 HUMAN 1 -1.1671 0.0638 IYKEKRESVSKEDLA-p Q9H999;S283-p IYKEKRESVSKEDLA 0.0520154613962689 0.00519854373998719 -0.515 -0.814333333333333 27.9103450054993 33.2210102081973 -0.515 -0.814333333333333 0.00161795150173908 0.000476320177542121 -5.82069040299902 -7.46169257858269 Q9H999 PANK3 Q9H999.S283.p_PANK3 Q9H999_S283s _1_1_283_283 Q9H999 Q9H999 Pantothenate kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7049.7049.4 10.33 4.09 2.086 2 1 1 0 579.3237 2234.3072 S283s TMT10 279 (K) EKREsVSKEDLAR (A) EKRES(0.99)VS(0.0)KEDLAR K:TMT10,s:Phosphorylated S PANK3 41492.7 3 1 5481.1 18.92 HUMAN 1 -27.9103 -33.221 IYKRMTGSEFDFEEM-p P50395;S427-p IYKRMTGSEFDFEEM 0.271805915294563 0.855661494688762 0.17 -0.035 10.7188606071929 0.954797968043715 0.17 -0.035 0.0847449717554941 0.802638898426263 2.10692583270487 -0.262475524396128 P50395 GDI2 P50395.S427.p_GDI2 P50395_S427s _1_1_427_427 P50395 P50395|P50395-2 Rab GDP dissociation inhibitor beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25837.25837.3 11.12 11.12 1.103 2 1 1 0 663.6313 1908.9124 S427s TMT10 424 (R) MTGsEFDFEEMK (R) MT(0.0)GS(0.99)EFDFEEMK K:TMT10,s:Phosphorylated S GDI2 51118.8 2 6 1810.1 113.37 HUMAN 1 10.7189 -0.9548 IYMGKQESKDSFKQL-p Q8NHV4-3;S500-p IYMGKQESKDSFKQL 0.444636977587231 0.491285807080377 -0.147333333333333 -0.106 6.48529878879335 4.12480347512081 -0.147333333333333 -0.106 0.224631222739954 0.386829558864736 -1.37058120362249 -0.940748955702561 Q8NHV4 NEDD1 Q8NHV4.3.S500.p_NEDD1 Q8NHV4-3_S500s _1_1_500_500 Q8NHV4-3 Q8NHV4-3|Q8NHV4-2 Isoform 3 of Protein NEDD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13263.13263.3 8.59 8.59 8.589 2 1 1 0 617.6759 1771.0391 S500s TMT10 493 (K) IYMGKQEsK (D) IY(0.0)MGKQES(0.99)K K:TMT10,s:Phosphorylated S NEDD1 73336.3 1 5 1715.1 119.76 HUMAN 1 -6.4853 -4.1248 IYSLNEGYAKYFDAA-p O00757;Y216-p IYSLNEGYAKYFDAA 0.744474740122106 0.0935617698637777 -0.067 0.215666666666667 2.43188820234781 13.607683731175 -0.067 0.215666666666667 0.571230226248324 0.043574421180471 -0.602456291332758 2.61964813733399 O00757 FBP2 O00757.Y216.p_FBP2 O00757_Y216y _1_1_216_216 O00757 O00757 Fructose-1,6-bisphosphatase isozyme 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.20283.20283.2 15.35 8.2 6.808 3 1 1 0 848.444 1615.9096 Y216y TMT10 209 (K) IYSLNEGyAK (Y) IY(0.0)S(0.0)LNEGY(0.99)AK K:TMT10,y:Phosphorylated Y FBP2 37084.8 2 1 234.1 15.35 HUMAN 1 -2.4319 13.6077 IYTGYPLSPTKISQY-p Q86Z02;S1200-p IYTGYPLSPTKISQY 0.826766553707022 0.980096615485091 -0.0363333333333333 0.00333333333333334 1.59390679588124 0.124703572030962 -0.0363333333333334 0.00333333333333334 0.692802299373835 0.971694272366779 -0.416865761489762 0.0371507506356045 Q86Z02 HIPK1 Q86Z02.S1200.p_HIPK1 Q86Z02_S1200s _1_1_1200_1200 Q86Z02 Q86Z02|J3KP92|Q5SQL3|Q86Z02-3 Homeodomain-interacting protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20805.21009.3 12.48 12.48 1.874 7 1 1 0 675.0236 1943.089 S1200s TMT10 1190 (R) GSTIYTGYPLsPTK (I) GS(0.0)T(0.0)IY(0.0)T(0.0)GY(0.0)PLS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S HIPK1 131924.3 1 4 3723.1 44.49 HUMAN 1 -1.5939 0.1247 IYTRRVLSGEFQIVN-p P23921;S631-p IYTRRVLSGEFQIVN 0.263065676768825 0.0114504617192839 -0.167333333333333 -0.426333333333333 10.9978910698034 27.1628447623485 -0.167333333333333 -0.426333333333333 0.0794714053487713 0.00192183245719223 -2.15573988111224 -5.60545434754425 P23921 RRM1 P23921.S631.p_RRM1 P23921_S631s _1_1_631_631 P23921 P23921|E9PL69 Ribonucleoside-diphosphate reductase large subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24217.24217.4 19.15 19.15 99 1 1 1 0 597.8446 2308.3905 S631s TMT10 628 (R) RVLsGEFQIVNPHLLK (D) RVLS(1.0)GEFQIVNPHLLK K:TMT10,s:Phosphorylated S RRM1 90981.4 3 4 1744.1 118.13 HUMAN 1 -10.9979 -27.1628 IYVVPDDSQNRIKIR-p Q13017;S1115-p IYVVPDDSQNRIKIR 0.320972856526197 0.0362883413765434 -0.167333333333333 -0.432333333333333 9.24151548217927 19.3853878482564 -0.167333333333333 -0.432333333333333 0.11908263934702 0.0115202317338592 -1.85017872241972 -3.74490422911891 Q13017 ARHGAP5 Q13017.S1115.p_ARHGAP5 Q13017_S1115s _1_1_1115_1115 Q13017 Q13017|Q13017-2|A0A0A0MSK6 Rho GTPase-activating protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18585.18585.3 14.84 14.84 5.927 4 1 1 0 879.4398 2556.3346 S1115s TMT10 1103 (K) GYSDEIYVVPDDsQNRIK (I) GY(0.0)S(0.0)DEIY(0.0)VVPDDS(0.99)QNRIK K:TMT10,s:Phosphorylated S ARHGAP5 173940.2 1 6 639.1 255.25 HUMAN 1 -9.2415 -19.3854 KAAATPESQEPQAKG-p P49006;S151-p KAAATPESQEPQAKG 0.585616421770961 0.81722475416539 0.077 -0.027 4.2728192672844 1.22706855350107 0.077 -0.0269999999999999 0.373867809346732 0.753864243240668 0.968933085981755 -0.32987126575349 P49006 MARCKSL1 P49006.S151.p_MARCKSL1 P49006_S151s _1_1_151_151 P49006 P49006 MARCKS-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7793.7793.3 12.92 12.92 3.918 2 1 1 0 622.6526 1785.9747 S151s TMT10 145 (K) AAATPEsQEPQAK (G) AAAT(0.0)PES(0.99)QEPQAK K:TMT10,s:Phosphorylated S MARCKSL1 19585.5 1 11 402.1 327.42 HUMAN 1 4.2728 -1.2271 KAAAYDISEDEED__-p P49585;S362-p KAAAYDISEDEED__ 0.0946777628850844 0.671807807679384 0.331666666666667 0.05 21.784534679985 2.36200546595699 0.331666666666667 0.0500000000000001 0.00663050385664538 0.580496296593577 4.27283103925632 0.587484855910445 P49585 PCYT1A P49585.S362.p_PCYT1A P49585_S362s _1_1_362_362 P49585 P49585 Choline-phosphate cytidylyltransferase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9243.9243.2 17.3 17.3 17.301 2 1 1 0 1065.9846 2050.997 S362s TMT10 354 (R) HKAAAYDIsEDEED (-) HKAAAY(0.0)DIS(0.99)EDEED K:TMT10,s:Phosphorylated S PCYT1A 42072.6 5 11 694.1 242.25 HUMAN 1 21.7845 2.362 KAAGYKVSPGRPPGS-p Q7Z6I8;S137-p KAAGYKVSPGRPPGS 0.586985109883825 0.179844070644604 -0.079 -0.209 4.25743341577389 9.79959776993371 -0.079 -0.209 0.375194668480586 0.104722553433738 -0.966029362811702 -1.94614455618661 Q7Z6I8 C5orf24 Q7Z6I8.S137.p_C5orf24 Q7Z6I8_S137s _1_1_137_137 Q7Z6I8 Q7Z6I8 UPF0461 protein C5orf24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11911.11911.3 10.4 10.4 10.399 3 1 1 0 784.785 2272.3744 S137s TMT10 131 (K) AAGYKVsPGRPPGSIK (A) AAGY(0.0)KVS(0.99)PGRPPGS(0.0)IK K:TMT10,s:Phosphorylated S C5orf24 20359.6 1 3 4085.1 37.86 HUMAN 1 -4.2574 -9.7996 KAALLKASPKKAPGT-p P50914;S139-p KAALLKASPKKAPGT 0.263859982002435 0.000952253650599092 -0.249333333333333 -1.96166666666667 10.9802029922137 58.3089638489242 -0.249333333333333 -1.96166666666667 0.0797957389321717 1.47605865318373e-06 -2.1526414303045 -22.4392200471497 P50914 RPL14 P50914.S139.p_RPL14 P50914_S139s _1_1_139_139 P50914 P50914 60S ribosomal protein L14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14786.14786.2 11.23 7.71 99 1 1 1 0 833.5167 1586.0608 S139s TMT10 133 (K) AALLKAsPK (K) AALLKAS(1.0)PK K:TMT10,s:Phosphorylated S RPL14 23545.5 7 1 4488.1 30.78 HUMAN 1 -10.9802 -58.309 KAAPRAYSDHDDRWE-p Q9Y3X0;S362-p KAAPRAYSDHDDRWE 0.593917678549206 0.898062550103885 -0.0793333333333333 -0.0186666666666666 4.17320762406763 0.654558735957441 -0.0793333333333333 -0.0186666666666666 0.382542099961017 0.860090451768309 -0.950096947558383 -0.184815022382413 Q9Y3X0 CCDC9 Q9Y3X0.S362.p_CCDC9 Q9Y3X0_S362s _1_1_362_362 Q9Y3X0 Q9Y3X0 Coiled-coil domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9137.9137.4 12.35 12.35 4.116 3 1 1 0 515.9928 1980.9816 S362s TMT10 360 (R) AYsDHDDRWETK (E) AY(0.0)S(0.99)DHDDRWET(0.0)K K:TMT10,s:Phosphorylated S CCDC9 59816.1 1 5 2003.1 103.17 HUMAN 1 -4.1732 -0.6546 KAARVLGSEGEEEDE-p P18858;S66-p KAARVLGSEGEEEDE 0.802234613181594 0.109404234016875 -0.0376666666666667 0.231 1.84232447865886 12.6934136364325 -0.0376666666666667 0.231 0.654285886249969 0.0537846858563129 -0.473593436399716 2.45465670727192 P18858 LIG1 P18858.S66.p_LIG1 P18858_S66s _1_1_66_66 P18858 P18858|P18858-3|F5GZ28|P18858-2|M0R0Q7|B4E135 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19827.19827.2 19.6 15.14 8.215 2 1 1 0 1149.5629 2218.1491 S66s TMT10 63 (R) VLGsEGEEEDEALSPAK (G) VLGS(0.99)EGEEEDEALS(0.0)PAK K:TMT10,s:Phosphorylated S LIG1 102361.8 2 4 302.1 376.44 HUMAN 1 -1.8423 12.6934 KAATCEGSESSGFGK-p Q9UPN4-2;S221-p KAATCEGSESSGFGK 0.89100765848779 0.0590444249863997 0.0233333333333333 -0.216 0.978846206169971 16.3712252294478 0.0233333333333333 -0.216 0.798206719356842 0.0230609650213226 0.268563771316909 -3.13751687624598 Q9UPN4 CEP131 Q9UPN4.2.S221.p_CEP131 Q9UPN4-2_S221s _1_1_221_221 Q9UPN4-2 Q9UPN4|Q9UPN4-2|I3L2J8|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16289.16289.3 18.52 13.47 2.184 4 1 1 0 831.7596 2413.3 S221s TMT10 215 (K) AATCEGsESSGFGKLPK (N) AAT(0.0)CEGS(0.99)ES(0.0)S(0.0)GFGKLPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CEP131 122301.7 4 11 359.1 345.98 HUMAN 1 0.9788 -16.3712 KAAVLAPSPGALQSK-p Q9ULM0;S219-p KAAVLAPSPGALQSK 0.153364244244344 0.415931609516024 -0.291 -0.200666666666667 16.3671728774101 5.06779181681576 -0.291 -0.200666666666667 0.0230824929856771 0.311329890080953 -3.13901259911589 -1.11623871952418 Q9ULM0 PLEKHH1 Q9ULM0.S219.p_PLEKHH1 Q9ULM0_S219s _1_1_219_219 Q9ULM0 Q9ULM0 Pleckstrin homology domain-containing family H member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20680.20680.3 14.28 14.28 8.472 2 1 1 0 616.6848 1768.0733 S219s TMT10 213 (K) AAVLAPsPGALQSK (D) AAVLAPS(0.99)PGALQS(0.0)K K:TMT10,s:Phosphorylated S PLEKHH1 152827.1 1 3 981.1 192.43 HUMAN 1 -16.3672 -5.0678 KAAVLSDSEDEEKAS-p Q96ST2;S400-p KAAVLSDSEDEEKAS 0.0739261060777586 0.182429377403824 0.578666666666667 0.179333333333333 24.2875639768517 9.71933687663475 0.578666666666667 0.179333333333333 0.00372600644963318 0.106675899201013 4.86557230072283 1.93223149500209 Q96ST2 IWS1 Q96ST2.S400.p_IWS1 Q96ST2_S400s _1_1_400_400 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13319.13319.2 15.88 15.88 2.518 2 1 1 0 915.9419 1750.9111 S400s TMT10 394 (K) AAVLSDsEDEEK (A) AAVLS(0.0)DS(0.99)EDEEK K:TMT10,s:Phosphorylated S IWS1 92010 5 6 230.1 422.87 HUMAN 1 24.2876 9.7193 KAAYGDLSSEEEEEN-p O15541;S84-p KAAYGDLSSEEEEEN 0.89017987493411 0.0227731036088646 -0.022 0.346 0.986515434666998 22.4263620095952 -0.022 0.346 0.796798405863334 0.00571957552455357 -0.270492537519887 4.41532820105813 O15541 RNF113A O15541.S84.p_RNF113A O15541_S84sS85s_2_2_84_85 O15541 O15541 RING finger protein 113A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26599.26599.2 18.59 18.59 5.97 5 2 2 0 1631.722 3102.5043 S84s S85s TMT10 78 (K) AAYGDLssEEEEENEPESLGVVYK (S) AAY(0.0)GDLS(0.99)S(0.99)EEEEENEPES(0.0)LGVVY(0.0)K K:TMT10,s:Phosphorylated S RNF113A 39528.2 4 5 1876.1 109.61 HUMAN 1 -0.9865 22.4264 KADGGAEYATYQTKS-p P15529-2;Y384-p KADGGAEYATYQTKS 0.288149464288374 0.555201351683552 0.221 -0.175666666666667 10.1931582753699 3.44330537160729 0.221 -0.175666666666667 0.0956498233878252 0.452553015251147 2.01528953277479 -0.80897642514286 P15529 CD46 P15529.2.Y384.p_CD46 P15529-2_Y384y _1_1_384_384 P15529-2 P15529-2|P15529-5 Isoform B of Membrane cofactor protein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11433.11433.3 17.73 17.73 8.168 4 1 1 0 638.3063 1832.9431 Y384y TMT10 378 (K) ADGGAEyATYQTK (S) ADGGAEY(0.99)AT(0.0)Y(0.0)QT(0.0)K K:TMT10,y:Phosphorylated Y CD46 45263.9 2 1 197.1 17.73 HUMAN 1 10.1932 -3.4433 KADIKSPSLDVTVPE-p Q09666;S4995-p KADIKSPSLDVTVPE 0.268882767582247 0.0406016875652692 -0.218333333333333 -0.251666666666667 10.815846010403 18.6526426517356 -0.218333333333333 -0.251666666666667 0.0828734462167819 0.0136375304981184 -2.123877430124 -3.59249668776227 Q09666 AHNAK Q09666.S4995.p_AHNAK Q09666_S4995s _1_1_4995_4995 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.31308.31308.3 22.65 22.65 1.149 5 1 1 0 1040.5452 3039.6502 S4995s TMT10 4993 (K) SPsLDVTVPEAELNLETPEISVGGK (G) S(0.0)PS(0.99)LDVT(0.0)VPEAELNLET(0.0)PEIS(0.0)VGGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 8 113 1.1 4313.36 HUMAN 1 -10.8158 -18.6526 KADLREKSAIYQLEE-p P15924;S246-p KADLREKSAIYQLEE 0.0866557243462627 0.282807974752255 -0.386 -0.104666666666667 22.7244383699437 7.2328222261851 -0.386 -0.104666666666667 0.00534018328412376 0.189111429452713 -4.48958528021955 -1.50128042837477 P15924 DSP P15924.S246.p_DSP P15924_S246s _1_1_246_246 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.36785.36785.3 23.92 23.04 6.567 3 1 1 0 794.0742 2300.2426 S246s TMT10 246 (K) sAIYQLEEEYENLLK (A) S(0.99)AIY(0.0)QLEEEY(0.0)ENLLK K:TMT10,s:Phosphorylated S DSP 334221.3 3 5 104.1 590.4 HUMAN 1 -22.7244 -7.2328 KADSEPESPLNASYV-p Q5T1V6;S160-p KADSEPESPLNASYV 0.251905903014708 0.0357464770924647 -0.206 0.400666666666667 11.4190001285898 19.4737512779461 -0.206 0.400666666666667 0.072127351807765 0.0112882045935171 -2.22968442184072 3.76350685678471 Q5T1V6 DDX59 Q5T1V6.S160.p_DDX59 Q5T1V6_S160s _1_1_160_160 Q5T1V6 Q5T1V6|Q5T1V6-2 Probable ATP-dependent RNA helicase DDX59 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19434.19434.3 21.96 21.96 4.711 6 1 1 0 1068.8849 3124.677 S160s TMT10 148 (K) LSNPQKADSEPEsPLNASYVYK (E) LS(0.0)NPQKADS(0.0)EPES(0.99)PLNAS(0.0)Y(0.0)VY(0.0)K K:TMT10,s:Phosphorylated S DDX59 69493.1 6 3 2478.1 81.77 HUMAN 1 -11.419 19.4738 KADVGRLSPEVKARS-p P49815-4;S1388-p KADVGRLSPEVKARS 0.551250069551633 0.0204028582267751 -0.0783333333333333 0.329 4.77334683742205 23.1395246550003 -0.0783333333333333 0.329 0.333169560750132 0.00485341618978095 -1.0623541770135 4.58231615331358 P49815 TSC2 P49815.4.S1388.p_TSC2 P49815-4_S1388s _1_1_1388_1388 P49815-4 P49815-4|P49815-2|P49815-3|H3BMQ0|P49815-5|P49815-6|P49815-7 Isoform 4 of Tuberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29155.29155.5 19.47 19.47 9.018 6 1 1 0 802.0267 3926.1326 S1388s TMT10 1362 (K) SSSSPELQTLQDILGDPGDKADVGRLsPEVK (A) S(0.0)S(0.0)S(0.0)S(0.0)PELQT(0.0)LQDILGDPGDKADVGRLS(0.99)PEVK K:TMT10,s:Phosphorylated S TSC2 200147.7 6 20 214.1 435.34 HUMAN 1 -4.7733 23.1395 KAEAGAGSATEFQFR-p P46783;S146-p KAEAGAGSATEFQFR 0.941601783060378 0.15295985410381 0.0113333333333333 -0.213333333333333 0.513297480407954 10.723748374756 0.0113333333333333 -0.213333333333333 0.888526227771205 0.0846496491713217 0.146903671308486 -2.1068573140481 P46783 RPS10 P46783.S146.p_RPS10 P46783_S146s _1_1_146_146 P46783 Q9NQ39|P46783 40S ribosomal protein S10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16251.16251.3 15.22 15.22 2.037 2 1 1 0 584.2717 1670.8336 S146s TMT10 140 (K) AEAGAGsATEFQFR (G) AEAGAGS(0.99)AT(0.0)EFQFR s:Phosphorylated S RPS10 18897.4 7 4 2425.1 84.06 HUMAN 1 0.5133 -10.7237 KAEAPLPSPKLEGEL-p Q09666;S5110-p KAEAPLPSPKLEGEL 0.0217780195589434 0.00550510630988842 -1.01466666666667 -0.872 38.6506528898873 32.7579435453401 -1.01466666666667 -0.872 0.000136437800951433 0.000529914307493942 -9.56182413096178 -7.30414404360618 Q09666 AHNAK Q09666.S5110.p_AHNAK Q09666_S5110s _1_1_5110_5110 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33735.33735.5 34.45 34.17 13.751 2 1 1 0 973.1489 4781.7515 S5110s TMT10 5102 (K) FKAEAPLPsPKLEGELQAPDLELSLPAIHVEGLDIK (A) FKAEAPLPS(0.99)PKLEGELQAPDLELS(0.0)LPAIHVEGLDIK K:TMT10,s:Phosphorylated S AHNAK 629603.7 9 118 1.1 4313.36 HUMAN 1 -38.6507 -32.7579 KAEISRLSASQIRNL-p P40818;S758-p KAEISRLSASQIRNL 0.13975931589192 0.310129317050479 -0.278333333333333 -0.162333333333333 17.4869537319021 6.71840554762239 -0.278333333333333 -0.162333333333333 0.0178362941844423 0.212892050636633 -3.35916858868467 -1.41125155513102 P40818 USP8 P40818.S758.p_USP8 P40818_S758s _1_1_758_758 P40818 P40818|P40818-2 Ubiquitin carboxyl-terminal hydrolase 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12244.12244.3 9.17 9.17 1.281 3 1 1 0 547.2972 1559.9067 S758s TMT10 752 (K) AEISRLsASQIR (N) AEIS(0.0)RLS(0.99)AS(0.0)QIR s:Phosphorylated S USP8 128490.8 1 10 788.1 224.97 HUMAN 1 -17.487 -6.7184 KAEKLKQSLPPGLAV-p P63173;S59-p KAEKLKQSLPPGLAV 0.171396449036957 0.254431397695122 0.274 0.120333333333333 15.2501860297869 7.82980020023957 0.274 0.120333333333333 0.0298525474296717 0.164823821796118 2.92550681287979 1.60512356514729 P63173 RPL38 P63173.S59.p_RPL38 P63173_S59s _1_1_59_59 P63173 P63173 60S ribosomal protein L38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20496.20496.3 12.31 12.31 99 1 1 1 0 673.4179 1938.2719 S59s TMT10 56 (K) LKQsLPPGLAVK (E) LKQS(1.0)LPPGLAVK K:TMT10,s:Phosphorylated S RPL38 8274.8 1 1 6333.1 12.31 HUMAN 1 15.2502 7.8298 KAEKSPKSPNSVKAE-p A0A0C4DFM7;S134-p KAEKSPKSPNSVKAE 0.322413243844237 0.786601039492639 -0.152 0.0286666666666667 9.20117505617765 1.44656067673485 -0.152 0.0286666666666667 0.120193918591899 0.716710772760075 -1.84319296959843 0.382384007209604 A0A0C4DFM7 ZCCHC11 A0A0C4DFM7.S134.p_ZCCHC11 A0A0C4DFM7_S134s _1_1_134_134 A0A0C4DFM7 A0A0C4DFM7|Q5TAX3|Q5TAX3-2|E9PRG2|X6R5G7 Terminal uridylyltransferase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8221.8221.3 7.18 2.44 1.504 3 1 1 0 570.9962 1631.0095 S134s TMT10 131 (K) SPKsPNSVK (A) S(0.0)PKS(0.99)PNS(0.0)VK K:TMT10,s:Phosphorylated S ZCCHC11 188216.3 2 4 850.1 212.61 HUMAN 1 -9.2012 1.4466 KAELFTQSCADLDKW-p A0A087WUZ3;S1388-p KAELFTQSCADLDKW 0.730999736003967 0.0201264196371064 0.0583333333333333 0.343666666666667 2.58242406003891 23.2369260371599 0.0583333333333334 0.343666666666667 0.551769377470213 0.00474577775454013 0.634242339574238 4.60543407183637 A0A087WUZ3 NotFound A0A087WUZ3.S1388.p_NotFound A0A087WUZ3_S1388s _1_1_1388_1388 A0A087WUZ3 A0A087WUZ3|Q01082|Q01082-2|Q01082-3 Spectrin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26634.26634.4 15.9 15.9 2.419 2 1 1 0 739.1321 2873.5322 S1388s TMT10 1376 (R) LFDANKAELFTQsCADLDK (W) LFDANKAELFT(0.0)QS(0.99)CADLDK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SPTBN1 275623.3 2 6 233.1 420.49 HUMAN 1 2.5824 23.2369 KAENKGISPVVSEHR-p Q99700;S784-p KAENKGISPVVSEHR 0.801500649004146 0.00526062627901912 -0.0356666666666667 -0.644 1.85047188465514 33.1289471058433 -0.0356666666666667 -0.644 0.653059590303921 0.000486525143498981 -0.475427293556266 -7.43014342930491 Q99700 ATXN2 Q99700.S784.p_ATXN2 Q99700_S784s _1_1_784_784 Q99700 Q99700|Q99700-4|V9GY86 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9049.9049.3 10.55 10.55 2.361 2 1 1 0 582.9942 1667.0005 S784s TMT10 782 (K) GIsPVVSEHRK (Q) GIS(0.99)PVVS(0.0)EHRK K:TMT10,s:Phosphorylated S ATXN2 140907.9 5 19 176.1 481.52 HUMAN 1 -1.8505 -33.1289 KAEPSPQSWSSLWKH-p Q8WXH0;S4139-p KAEPSPQSWSSLWKH 0.251544579923944 0.842431700421894 -0.484666666666667 0.0206666666666667 11.436609524917 1.046622533735 -0.484666666666667 0.0206666666666667 0.0718354881831735 0.78584654230125 -2.23278440006381 0.285504355989673 Q8WXH0 SYNE2 Q8WXH0.S4139.p_SYNE2 Q8WXH0_S4136sS4139s_2_2_4136_4139 Q8WXH0 Q8WXH0|A0A0C4DGK3|Q8WXH0-7 Nesprin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30956.30956.3 8.51 8.51 1.215 4 2 2 0 707.6676 1961.0533 S4136s S4139s TMT10 4133 (K) AEPsPQsWSSLWK (H) AEPS(0.99)PQS(0.99)WS(0.0)S(0.0)LWK K:TMT10,s:Phosphorylated S SYNE2 802304.8 1 19 188.1 472.65 HUMAN 1 -11.4366 1.0466 KAEPYVASEYKTVHE-p Q9BZ29-4;S927-p KAEPYVASEYKTVHE 0.267086807703558 0.526826969335906 -0.208666666666667 0.089 10.8637545335651 3.73960668578946 -0.208666666666667 0.089 0.0819642645977756 0.422706894535614 -2.13225698084357 0.866876080773185 Q9BZ29 DOCK9 Q9BZ29.4.S927.p_DOCK9 Q9BZ29-4_S927s _1_1_927_927 Q9BZ29-4 A0A0A0MSY4|Q9BZ29-4|A0A088AWN3|Q9BZ29-5|Q9BZ29-3|Q6ZSL5|A0A0A0MT38|Q9BZ29-6 Isoform 4 of Dedicator of cytokinesis protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17472.17472.4 17.22 16.83 4.837 5 1 1 0 613.0723 2369.2996 S927s TMT10 917 (K) YAYKAEPYVAsEYK (T) Y(0.0)AY(0.0)KAEPY(0.0)VAS(0.99)EY(0.0)K K:TMT10,s:Phosphorylated S DOCK9 241123.4 4 3 1592.1 129.29 HUMAN 1 -10.8638 3.7396 KAEQMHQSFVAETSQ-p P49454;S876-p KAEQMHQSFVAETSQ 0.31303946070859 0.00695886872350472 -0.217 -0.469666666666667 9.4387820325468 30.9259285037524 -0.217 -0.469666666666667 0.113794637514574 0.000807992165241091 -1.88434971896364 -6.70779476752192 P49454 CENPF P49454.S876.p_CENPF P49454_S876s _1_1_876_876 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10022.10022.3 16.65 16.65 4.637 3 1 1 0 686.6487 1977.965 S876s TMT10 870 (K) AEQMHQsFVAETSQR (I) AEQMHQS(0.99)FVAET(0.0)S(0.0)QR s:Phosphorylated S CENPF 371067.2 1 10 47.1 771.73 HUMAN 1 -9.4388 -30.9259 KAERLRWSPAQEESF-p I3L4J6;S270-p KAERLRWSPAQEESF 0.389389394272965 0.400414419406525 -0.140333333333333 -0.102333333333333 7.57874226364804 5.28734123133074 -0.140333333333333 -0.102333333333333 0.17463278240866 0.295982392837766 -1.56198603898142 -1.15621860157719 I3L4J6 ZNF232 I3L4J6.S270.p_ZNF232 I3L4J6_S270s _1_1_270_270 I3L4J6 I3L4J6 Zinc finger protein 232 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17609.17609.3 11.2 7.4 5.429 2 1 1 0 605.6316 1734.9125 S270s TMT10 267 (R) LRWsPAQEESFR (Q) LRWS(0.99)PAQEES(0.0)FR s:Phosphorylated S ZNF232 50377.6 1 1 6519.1 11.2 HUMAN 1 -7.5787 -5.2873 KAETEKQSPPHGEAK-p Q9Y6D6;S52-p KAETEKQSPPHGEAK 0.10892597518252 0.0166076750945612 -0.362666666666667 0.369666666666667 20.1745827061847 24.575229792177 -0.362666666666667 0.369666666666667 0.00960598113456326 0.00348720132305473 -3.91651827036535 4.9309751627378 Q9Y6D6 ARFGEF1 Q9Y6D6.S52.p_ARFGEF1 Q9Y6D6_S52s _1_1_52_52 Q9Y6D6 Q9Y6D6 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19954.20168.5 22.11 17.24 2.38 2 1 1 0 730.3897 3567.9499 S52s TMT10 36 (K) ACEVALEEIKAETEKQsPPHGEAK (A) ACEVALEEIKAET(0.0)EKQS(0.99)PPHGEAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARFGEF1 210988.4 5 1 381.1 335.01 HUMAN 1 -20.1746 24.5752 KAEVDNRSPQKFGRF-p Q5W0B1;S210-p KAEVDNRSPQKFGRF 0.0613809554565416 0.000952253650599092 -0.443 -2.09866666666667 26.4367208993204 54.8863681076394 -0.443 -2.09866666666667 0.00227157933970811 3.24610967623512e-06 -5.41710136361499 -19.3732205972247 Q5W0B1 RNF219 Q5W0B1.S210.p_RNF219 Q5W0B1_S210s _1_1_210_210 Q5W0B1 Q5W0B1 RING finger protein 219 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6838.6838.4 10.9 10.9 99 1 1 1 0 511.2703 1962.0921 S210s TMT10 204 (K) AEVDNRsPQKFGR (F) AEVDNRS(1.0)PQKFGR K:TMT10,s:Phosphorylated S RNF219 82427.3 4 1 1133.1 173.85 HUMAN 1 -26.4367 -54.8864 KAFLASLSPAMVVPE-p Q9H211;S318-p KAFLASLSPAMVVPE 0.980593512823283 0.264550314752512 0.00433333333333332 -0.128333333333333 0.16964668729009 7.60505892612386 0.00433333333333331 -0.128333333333333 0.961690511857579 0.17357777112606 0.0502965032088014 -1.56609310668098 Q9H211 CDT1 Q9H211.S318.p_CDT1 Q9H211_S318s _1_1_318_318 Q9H211 Q9H211 DNA replication factor Cdt1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.33351.33351.3 18.56 18.56 2.775 3 1 1 0 785.405 2274.2365 S318s TMT10 312 (K) AFLASLsPAMVVPEDQLTR (W) AFLAS(0.0)LS(0.99)PAMVVPEDQLT(0.0)R s:Phosphorylated S CDT1 60959.8 4 4 1732.1 118.73 HUMAN 1 0.1696 -7.6051 KAFSESGSNLHALMN-p Q6P4F7;S608-p KAFSESGSNLHALMN 0.588938726682811 0.629016847859228 0.133333333333333 0.14 4.23396532906891 2.73701119677141 0.133333333333333 0.14 0.377227605685274 0.532474580810877 0.961596344653296 0.66638174393978 Q6P4F7 ARHGAP11A Q6P4F7.S608.p_ARHGAP11A Q6P4F7_S604sS606sS608s_3_3_604_608 Q6P4F7 Q6P4F7|Q6P4F7-3 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.40262.40857.4 7 7 3.08 6 3 3 0 901.92 3347.7894 S604s S606s S608s N609n M614m Hydrogen 602 (K) AFsEsGsnLHALmNQRQSSVTNVGKVK (L) AFS(0.99)ES(0.99)GS(0.99)N(0.99)LHALM(1.0)N(0.0)QRQS(0.0)S(0.0)VT(0.0)N(0.0)VGKVK K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated,m:Oxidized methionine ARHGAP11A 114948.2 1 24 414.1 321.53 HUMAN 1 4.234 2.737 KAGADGGTPTDRYNS-p Q9UPT8;T1210-p KAGADGGTPTDRYNS 0.0607741369847978 0.334138244385985 -0.462 -0.282 26.6459735022988 6.30931882347153 -0.462 -0.282 0.00216472458634266 0.233920410631364 -5.47309808562146 -1.33915050718568 Q9UPT8 ZC3H4 Q9UPT8.T1210.p_ZC3H4 Q9UPT8_T1210t _1_1_1210_1210 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5437.5437.5 14.33 10.34 10.703 5 1 1 0 567.0859 2751.4327 T1210t TMT10 1204 (K) AGADGGtPTDRYNSYNRPRPK (A) AGADGGT(0.99)PT(0.0)DRY(0.0)NS(0.0)Y(0.0)NRPRPK K:TMT10,t:Phosphorylated T ZC3H4 140881.7 2 8 427.1 318.7 HUMAN 1 -26.646 -6.3093 KAGATRRSLDDLSAP-p A6NKD9;S246-p KAGATRRSLDDLSAP 0.622878498057638 0.779506401206205 0.0753333333333333 -0.0286666666666666 3.8199524424053 1.49802183253217 0.0753333333333333 -0.0286666666666666 0.414958586630442 0.708268319983488 0.882553033810298 -0.394482231715453 A6NKD9 CCDC85C A6NKD9.S246.p_CCDC85C A6NKD9_S246s _1_1_246_246 A6NKD9 A6NKD9 Coiled-coil domain-containing protein 85C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8644.8857.3 16.75 16.75 4.777 2 1 1 0 551.9366 1573.8284 S246s TMT10 246 (R) sLDDLSAPPHHR (S) S(0.99)LDDLS(0.0)APPHHR s:Phosphorylated S CCDC85C 45494 5 1 3824.1 42.43 HUMAN 1 3.82 -1.498 KAGEQQLSEPEDMEM-p Q93009;S18-p KAGEQQLSEPEDMEM 0.687777093309933 0.0260088645003298 0.113 0.388333333333333 3.05321781252753 21.5515894911717 0.113 0.388333333333333 0.49508323349257 0.00699585904990075 0.731200861829697 4.21579422167942 Q93009 USP7 Q93009.S18.p_USP7 Q93009_S18s_1_1_18_18 Q93009 Q93009|H3BMF6 Ubiquitin carboxyl-terminal hydrolase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14496.14707.3 19.29 19.29 2.084 2 1 1 0 991.4065 2876.24 S18s M25m TMT10 12 (K) AGEQQLsEPEDMEmEAGDTDDPPR (I) AGEQQLS(0.99)EPEDM(0.0)EM(0.99)EAGDT(0.0)DDPPR s:Phosphorylated S,m:Oxidized methionine USP7 129383.8 7 1 1927.1 106.49 HUMAN 1 3.0532 21.5516 KAGFNYESPSKGGNF-p Q9UHF7-2;S103-p KAGFNYESPSKGGNF 0.657565461800159 0.00106567586669276 -0.0633333333333333 -1.32933333333333 3.41410600417573 50.3619207881578 -0.0633333333333334 -1.32933333333333 0.455605963067346 9.20042567336234e-06 -0.803336873709727 -15.9398390900814 Q9UHF7 TRPS1 Q9UHF7.2.S103.p_TRPS1 Q9UHF7-2_S103s _1_1_103_103 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RJ97 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13684.14159.3 14.55 14.55 4.176 3 1 1 0 546.6041 1557.8313 S103s TMT10 97 (K) AGFNYEsPSK (G) AGFNY(0.0)ES(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S TRPS1 145246 12 3 14.1 1150.14 HUMAN 1 -3.4141 -50.3619 KAGGSPASYHGSTSP-p O95208-2;S195-p KAGGSPASYHGSTSP 0.176215831653265 0.0215287957368388 0.262333333333333 0.322666666666667 14.9805654348328 22.7922585501144 0.262333333333333 0.322666666666667 0.031764604807005 0.00525743782029091 2.87480699724723 4.50050679724444 O95208 EPN2 O95208.2.S195.p_EPN2 O95208-2_S195s _1_1_195_195 O95208-2 O95208-2|I3L2B2|O95208-3 Isoform 2 of Epsin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4553.4553.3 16.64 16.64 3.168 6 1 1 0 580.9355 1660.8241 S195s TMT10 189 (K) AGGSPAsYHGSTSPR (V) AGGS(0.0)PAS(0.99)Y(0.0)HGS(0.0)T(0.0)S(0.0)PR s:Phosphorylated S EPN2 62355.6 4 3 1459.1 140.33 HUMAN 1 14.9806 22.7923 KAGLQMKSPEKKRRK-p Q9BRQ0;S40-p KAGLQMKSPEKKRRK 0.158297715435374 0.0086403959384387 -0.294666666666667 -0.679666666666667 16.0521266789057 29.2740234924184 -0.294666666666667 -0.679666666666667 0.0248191744765938 0.00118194604226759 -3.07820555588068 -6.20472580134069 Q9BRQ0 PYGO2 Q9BRQ0.S40.p_PYGO2 Q9BRQ0_S40s _1_1_40_40 Q9BRQ0 Q9BRQ0 Pygopus homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12711.12711.2 11.95 5.87 99 1 1 1 0 928.5197 1776.0657 S40s TMT10 34 (K) AGLQMKsPEK (K) AGLQMKS(1.0)PEK K:TMT10,s:Phosphorylated S PYGO2 41643 6 2 2457.1 82.71 HUMAN 1 -16.0521 -29.274 KAGPLGGSSYEEEEE-p Q15223;S434-p KAGPLGGSSYEEEEE 0.15636344485557 0.0214425607553257 -0.402666666666667 0.413 16.1744543655245 22.8163555012728 -0.402666666666667 0.413 0.0241298467365786 0.0052283475577616 -3.10175939706378 4.50615291708862 Q15223 PVRL1 Q15223.S434.p_PVRL1 Q15223_S434s _1_1_434_434 Q15223 Q15223 Nectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11133.11133.4 18.92 18.92 1.139 3 1 1 0 859.411 3354.6541 S434s TMT10 427 (K) KAGPLGGsSYEEEEEEEEGGGGGERK (V) KAGPLGGS(0.99)S(0.0)Y(0.0)EEEEEEEEGGGGGERK K:TMT10,s:Phosphorylated S NECTIN1 57499.4 9 3 885.1 206.68 HUMAN 1 -16.1745 22.8164 KAGTRTDSREDEISP-p P10644;S77-p KAGTRTDSREDEISP 0.2040437776167 0.00509455060478819 -0.269666666666667 -0.71 13.3666681744788 33.3790432235698 -0.269666666666667 -0.71 0.0460609809242093 0.000459299188019379 -2.57735327786794 -7.51611381620989 P10644 PRKAR1A P10644.S77.p_PRKAR1A P10644_S77sS83s_2_2_77_83 P10644 P10644|P10644-2|K7EMZ6 cAMP-dependent protein kinase type I-alpha regulatory subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13804.13804.3 7.92 7.92 1.27 4 2 2 0 994.1594 2820.5256 S77s S83s TMT10 71 (K) AGTRTDsREDEIsPPPPNPVVK (G) AGT(0.0)RT(0.0)DS(0.99)REDEIS(0.99)PPPPNPVVK K:TMT10,s:Phosphorylated S PRKAR1A 43209.1 1 3 3134.1 59.83 HUMAN 1 -13.3667 -33.379 KAGVNSDSPNNCSGK-p F5H070;S463-p KAGVNSDSPNNCSGK 0.10854647135141 0.0906361267053972 0.507333333333333 -0.285 20.2351175414333 13.7952219244426 0.507333333333334 -0.285 0.00947301545521277 0.0417328272449338 3.92959179431795 -2.65383348570902 F5H070 NotFound F5H070.S463.p_NotFound F5H070_S463s _1_1_463_463 F5H070 F5H070|Q9Y4C1|F8WE62 Lysine-specific demethylase 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6648.6648.3 14.64 14.64 1.251 3 1 1 0 768.0549 2222.1802 S463s TMT10 457 (K) AGVNSDsPNNCSGKK (V) AGVNS(0.0)DS(0.99)PNNCS(0.0)GKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KDM3A 150340.6 2 4 2638.1 75.64 HUMAN 1 20.2351 -13.7952 KAHASLMSPGRRKSE-p Q14207;S207-p KAHASLMSPGRRKSE 0.812891412800423 0.0116785808991519 0.0436666666666667 -0.739333333333333 1.73065214508964 27.0300491246034 0.0436666666666667 -0.739333333333334 0.671328037425473 0.00198150461217038 0.44829084281465 -5.56929326629818 Q14207 NPAT Q14207.S207.p_NPAT Q14207_S207s _1_1_207_207 Q14207 Q14207 Protein NPAT HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6935.6935.2 15.68 12.39 3.933 2 1 1 0 668.3249 1255.6779 S207s TMT10 201 (K) AHASLMsPGR (R) AHAS(0.0)LMS(0.99)PGR s:Phosphorylated S NPAT 155599.6 4 1 1274.1 159.34 HUMAN 1 1.7307 -27.03 KAHEKTHSPLKPYGC-p Q13105-2;S357-p KAHEKTHSPLKPYGC 0.8286411774081 0.00172752646433129 -0.036 -0.894333333333333 1.56796251425106 43.7035279681519 -0.036 -0.894333333333334 0.69695341202287 4.26233129908333e-05 -0.410846238056504 -11.9294917598066 Q13105 ZBTB17 Q13105.2.S357.p_ZBTB17 Q13105-2_S357s _1_1_357_357 Q13105-2 Q13105-2|Q13105-3 Isoform 2 of Zinc finger and BTB domain-containing protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8857.8857.3 16.92 13.75 2.223 3 1 1 0 844.0863 2450.2775 S357s TMT10 355 (K) THsPLKPYGCEECGK (S) T(0.0)HS(0.99)PLKPY(0.0)GCEECGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZBTB17 90416.5 2 2 2774.1 71.14 HUMAN 1 -1.568 -43.7035 KAHQRQLTPPEGSSK-p B5ME19;T525-p KAHQRQLTPPEGSSK 0.549577794384144 0.102318082635605 0.101 0.193666666666667 4.80022170414836 13.0767522122422 0.101 0.193666666666667 0.331114217913117 0.0492407635606198 1.06731722681549 2.52351216382874 B5ME19 EIF3CL B5ME19.T525.p_EIF3CL B5ME19_T525t _1_1_525_525 B5ME19 B5ME19|Q99613|Q99613-2 Eukaryotic translation initiation factor 3 subunit C-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10828.10828.2 12.09 8.14 4.996 3 1 1 0 791.4165 1501.8626 T525t TMT10 523 (R) QLtPPEGSSK (S) QLT(0.99)PPEGS(0.0)S(0.0)K K:TMT10,t:Phosphorylated T EIF3CL 106155.7 3 9 451.1 308.49 HUMAN 1 4.8002 13.0768 KAIKDRVSLIKRKRE-p Q9H4A3-7;S563-p KAIKDRVSLIKRKRE 0.155202399069975 0.358596127041171 -0.395 0.123 16.2569902453602 5.90879491106328 -0.395 0.123 0.0236755989926152 0.25651957333683 -3.11769189801079 1.268001719796 Q9H4A3 WNK1 Q9H4A3.7.S563.p_WNK1 Q9H4A3-7_S563s _1_1_563_563 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12823.12823.3 7.68 0.77 99 1 1 1 0 456.938 1288.8353 S563s TMT10 560 (K) DRVsLIK (R) DRVS(1.0)LIK K:TMT10,s:Phosphorylated S WNK1 301202.7 1 8 162.1 495.27 HUMAN 1 -16.257 5.9088 KAILEQISAHGQKHR-p Q6ZRV2;S1048-p KAILEQISAHGQKHR 0.694555291282257 0.934636412554315 0.0773333333333333 -0.0213333333333333 2.97019051655817 0.41434288301613 0.0773333333333333 -0.0213333333333333 0.504639159537692 0.909003827100351 0.714351126632523 -0.119736027944892 Q6ZRV2 FAM83H Q6ZRV2.S1048.p_FAM83H Q6ZRV2_S1048s _1_1_1048_1048 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15936.15936.3 16.88 16.88 99 1 1 1 0 611.674 1753.0372 S1048s TMT10 1042 (K) AILEQIsAHGQK (H) AILEQIS(1.0)AHGQK K:TMT10,s:Phosphorylated S FAM83H 127633.5 1 31 7.1 1347.23 HUMAN 1 2.9702 -0.4143 KAINGPTSASGDDIS-p P51114;S585-p KAINGPTSASGDDIS 0.288174796119179 0.839840675273549 0.152666666666667 -0.0233333333333333 10.189421852511 1.06601095649434 0.152666666666667 -0.0233333333333333 0.0957321504685947 0.782346068305927 2.01463957155212 -0.290326734117251 P51114 FXR1 P51114.S585.p_FXR1 P51114_S585s _1_1_585_585 P51114 P51114|B4DXZ6|P51114-3 Fragile X mental retardation syndrome-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13077.13292.2 17.56 12.92 1.101 4 1 1 0 985.9967 1891.0173 S585s TMT10 579 (K) AINGPTsASGDDISK (L) AINGPT(0.0)S(0.99)AS(0.0)GDDIS(0.0)K K:TMT10,s:Phosphorylated S FXR1 70061.9 5 3 553.1 273.48 HUMAN 1 10.1894 -1.066 KAIQLEYSEARRTMT-p O43242;S303-p KAIQLEYSEARRTMT 0.395304354889455 0.0629700745931486 0.136333333333333 -0.219333333333333 7.43831471705445 15.9869737186374 0.136333333333333 -0.219333333333333 0.180371753899577 0.0251943192450177 1.53754050932882 -3.06352700927207 O43242 PSMD3 O43242.S303.p_PSMD3 O43242_S303s _1_1_303_303 O43242 O43242|O43242-2 26S proteasome non-ATPase regulatory subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12451.12451.3 9.96 9.96 3.897 2 1 1 0 548.9489 1564.8645 S303s TMT10 297 (K) AIQLEYsEARR (T) AIQLEY(0.0)S(0.99)EARR s:Phosphorylated S PSMD3 61090.6 2 2 3336.1 53.52 HUMAN 1 7.4383 -15.987 KAIQRTVSSSGCEGK-p Q8TF72;S1725-p KAIQRTVSSSGCEGK 0.93306667659969 0.264550314752512 0.0116666666666667 -0.123666666666667 0.591107347291297 7.60587304056295 0.0126987937147841 -0.123666666666667 0.872748809896021 0.173545235846076 0.167913361928301 -1.56623461461779 Q8TF72 SHROOM3 Q8TF72.S1725.p_SHROOM3 Q8TF72_S1725s _1_1_1725_1725 Q8TF72 Q8TF72 Protein Shroom3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4209.4209.2 7.99 7.99 7.993 4 1 1 0 853.421 1625.8681 S1725s TMT10 1723 (R) TVsSSGCEGKR (N) T(0.0)VS(0.99)S(0.0)S(0.0)GCEGKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SHROOM3 218451.1 2 51 90.2 622.62 HUMAN 1 0.5911 -7.6059 KAKAGAGSATLSMAY-p P40926;S246-p KAKAGAGSATLSMAY 0.906426058670281 0.0852607301426298 -0.0176666666666667 0.202 0.838103635429268 14.1523790679837 -0.0176666666666667 0.202 0.824498056862021 0.0384381160112826 -0.232760416550146 2.71928585487667 P40926 MDH2 P40926.S246.p_MDH2 P40926_S246s _1_1_246_246 P40926 P40926|P40926-2|G3XAL0 Malate dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16221.16221.2 13.55 6.2 2.149 4 1 1 0 882.4232 1683.8686 S246s TMT10 242 (K) AGAGsATLSMAYAGAR (F) AGAGS(0.99)AT(0.0)LS(0.0)MAY(0.0)AGAR s:Phosphorylated S MDH2 35959.1 2 5 2175.1 94.5 HUMAN 1 -0.8381 14.1524 KAKAGLESGAEPGDG-p O60832;S485-p KAKAGLESGAEPGDG 0.809934241634077 0.847073348780082 -0.0373333333333333 0.0216666666666667 1.75941067956957 1.01288924991422 -0.0373333333333334 0.0216666666666667 0.666897258393564 0.791974274988278 -0.45483708715739 0.27708110365213 O60832 DKC1 O60832.S485.p_DKC1 O60832_S485s _1_1_485_485 O60832 O60832 H/ACA ribonucleoprotein complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11363.11363.3 17.6 17.6 7.903 4 1 1 0 749.0142 2165.061 S485s TMT10 481 (K) AGLEsGAEPGDGDSDTTK (K) AGLES(0.99)GAEPGDGDS(0.0)DT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S DKC1 58129.5 4 5 363.1 342.61 HUMAN 1 -1.7594 1.0129 KAKAPGLSSKAKSAQ-p Q14008-3;S1133-p KAKAPGLSSKAKSAQ 0.478971851236535 0.0701344313344633 -0.102333333333333 -0.280333333333333 5.88377869501586 15.3454391888432 -0.102333333333333 -0.280333333333333 0.258001440340252 0.0292049240473028 -1.26383194489377 -2.94151923713171 Q14008 CKAP5 Q14008.3.S1133.p_CKAP5 Q14008-3_S1133s _1_1_1133_1133 Q14008-3 Q14008-3|Q14008-2 Isoform 3 of Cytoskeleton-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11507.11507.2 9.18 3.92 1.196 2 1 1 0 599.3357 1117.6981 S1133s TMT10 1129 (K) APGLsSK (A) APGLS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S CKAP5 228079.2 1 6 1323.1 154.15 HUMAN 1 -5.8838 -15.3454 KAKDDDDSDIPTAQR-p O60271;S493-p KAKDDDDSDIPTAQR 0.149889459280209 0.0387125750855136 -0.302333333333333 0.277 16.616959217715 18.9613702110072 -0.302333333333333 0.277 0.0217923506460158 0.0127017329882304 -3.18756769743536 3.65631251030779 O60271 SPAG9 O60271.S493.p_SPAG9 O60271_S493s _1_1_493_493 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-9|O60271-3|O60271-5 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7663.7663.3 16.22 11.07 15.586 2 1 1 0 814.7568 2362.2817 S493s TMT10 487 (K) AKDDDDsDIPTAQRK (R) AKDDDDS(0.99)DIPT(0.0)AQRK K:TMT10,s:Phosphorylated S SPAG9 147001.6 3 29 84.1 629.25 HUMAN 1 -16.617 18.9614 KAKDEAASPVKG___-p Q9H6D3;S391-p KAKDEAASPVKG___ 0.738993942982216 0.00201157797625339 0.0466666666666667 -0.835666666666667 2.4918726851853 42.1388359895323 0.0466666666666667 -0.835666666666667 0.563394666703481 6.1110579355835e-05 0.615171473376937 -11.1365007803348 Q9H6D3 XKR8 Q9H6D3.S391.p_XKR8 Q9H6D3_S391s _1_1_391_391 Q9H6D3 Q9H6D3 XK-related protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7130.7130.3 10.68 10.68 99 1 1 1 0 614.0115 1760.0521 S391s TMT10 385 (K) AKDEAAsPVKG (-) AKDEAAS(1.0)PVKG K:TMT10,s:Phosphorylated S XKR8 45110.1 1 1 6601.1 10.68 HUMAN 1 2.4919 -42.1388 KAKGETASEGTEAKK-p O75717;S1075-p KAKGETASEGTEAKK 0.115833042781969 0.0218261778734971 0.363333333333333 -0.350333333333333 19.4848461204426 22.7053810528067 0.363333333333333 -0.350333333333333 0.0112594036259437 0.00536366808202591 3.76925463253571 -4.48018830674443 O75717 WDHD1 O75717.S1075.p_WDHD1 O75717_S1075s _1_1_1075_1075 O75717 O75717|O75717-2 WD repeat and HMG-box DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5829.5829.3 10.58 10.58 1.194 3 1 1 0 682.696 1966.106 S1075s TMT10 1069 (K) AKGETAsEGTEAK (K) AKGET(0.0)AS(0.99)EGT(0.0)EAK K:TMT10,s:Phosphorylated S WDHD1 127448.5 1 14 554.1 273.24 HUMAN 1 19.4848 -22.7054 KAKGRKESEFDDEPK-p Q9Y2W1;S444-p KAKGRKESEFDDEPK 0.103158959778694 0.0118785065302085 -0.332 0.976333333333333 20.8317431623566 26.9012897376634 -0.332 0.976333333333333 0.00825706462675601 0.00204113169350497 -4.05976896776564 5.53439768508242 Q9Y2W1 THRAP3 Q9Y2W1.S444.p_THRAP3 Q9Y2W1_S444s _1_1_444_444 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8091.8091.3 7.67 4.8 99 1 1 1 0 735.3787 2124.154 S444s TMT10 440 (K) GRKEsEFDDEPK (F) GRKES(1.0)EFDDEPK K:TMT10,s:Phosphorylated S THRAP3 108720.9 1 70 10.2 1293.04 HUMAN 1 -20.8317 26.9013 KAKKFPNSPVKAEKA-p A0A0C4DFM7;S104-p KAKKFPNSPVKAEKA 0.0668913505644243 0.00320981770772267 -0.425666666666667 -0.767333333333333 25.3093428299601 37.3600931045517 -0.425666666666667 -0.767333333333334 0.00294486721442913 0.000183649897184965 -5.12255288345282 -9.00505868419879 A0A0C4DFM7 ZCCHC11 A0A0C4DFM7.S104.p_ZCCHC11 A0A0C4DFM7_S104s _1_1_104_104 A0A0C4DFM7 A0A0C4DFM7|Q5TAX3|Q5TAX3-2 Terminal uridylyltransferase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12118.12118.3 11.33 8.07 99 1 1 1 0 561.998 1604.0139 S104s TMT10 100 (K) KFPNsPVK (A) KFPNS(1.0)PVK K:TMT10,s:Phosphorylated S ZCCHC11 188216.3 4 2 850.1 212.61 HUMAN 1 -25.3093 -37.3601 KAKNNTVTPGGKPNK-p P18077;T59-p KAKNNTVTPGGKPNK 0.157589549248673 0.0044527191009727 -0.327666666666667 -0.642666666666667 16.1020173545917 34.5340752049334 -0.327666666666667 -0.642666666666667 0.0245356893612093 0.000352040378702716 -3.08780325911151 -7.92425610776042 P18077 RPL35A P18077.T59.p_RPL35A P18077_T59t _1_1_59_59 P18077 P18077 60S ribosomal protein L35a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7516.7516.3 13.46 8.52 2.089 2 1 1 0 665.3724 1914.1376 T59t TMT10 55 (K) NNTVtPGGKPNK (T) NNT(0.0)VT(0.99)PGGKPNK K:TMT10,t:Phosphorylated T RPL35A 12594.5 3 1 6169.1 13.46 HUMAN 1 -16.102 -34.5341 KALAEEASEEELPSD-p Q9H501;S657-p KALAEEASEEELPSD 0.591065958633332 0.565953424512232 -0.0866666666666667 0.0656666666666667 4.20506671654408 3.33422647948488 -0.0866666666666667 0.0656666666666667 0.379746105247114 0.464063436812373 -0.956130889535555 0.787399273005526 Q9H501 ESF1 Q9H501.S657.p_ESF1 Q9H501_S657s_1_1_657_657 Q9H501 Q9H501 ESF1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30088.30088.3 18.53 18.53 5.612 3 1 1 0 1183.5592 3467.6994 S657s N668n TMT10 651 (K) ALAEEAsEEELPSDVDLnDPYFAEEVK (Q) ALAEEAS(0.99)EEELPS(0.0)DVDLN(1.0)DPY(0.0)FAEEVK K:TMT10,s:Phosphorylated S,n:Deamidated ESF1 99193.8 2 8 500.1 291.39 HUMAN 1 -4.2051 3.3342 KALDISLSSGEEDEG-p Q8IY81;S335-p KALDISLSSGEEDEG 0.936755359874379 0.0161347105288124 -0.0153333333333333 0.582666666666667 0.552090492575649 24.7504807443215 -0.0153333333333334 0.582666666666667 0.880624878923185 0.00334928362053004 -0.157415105110488 4.97472908657257 Q8IY81 FTSJ3 Q8IY81.S335.p_FTSJ3 Q8IY81_S335sS336s_2_2_335_336 Q8IY81 Q8IY81 pre-rRNA processing protein FTSJ3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23960.23960.3 17.4 17.4 2.311 7 2 2 0 1058.7876 3014.4214 S335s S336s TMT10 329 (K) ALDISLssGEEDEGDEEDSTAGTTK (Q) ALDIS(0.0)LS(0.99)S(0.99)GEEDEGDEEDS(0.0)T(0.0)AGT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S FTSJ3 96956.1 4 8 631.1 257.01 HUMAN 1 -0.5521 24.7505 KALDKALSTMDLQKV-p Q9HD42;S101-p KALDKALSTMDLQKV 0.530763566971729 0.509795903698368 0.100333333333333 0.064 5.08964322038846 3.92305988654845 0.100333333333333 0.064 0.309767376743902 0.405222928987425 1.12046060822928 0.902242918731197 Q9HD42 CHMP1A Q9HD42.S101.p_CHMP1A Q9HD42_S101s _1_1_101_101 Q9HD42 Q9HD42|F8VVT7|F8VUA2|F5H875 Charged multivesicular body protein 1a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19670.19670.2 13.04 7.97 1.102 2 1 1 0 772.9115 1464.8496 S101s TMT10 99 (K) ALsTMDLQK (V) ALS(0.99)T(0.0)MDLQK K:TMT10,s:Phosphorylated S CHMP1A 21759.5 4 1 5151.1 22.39 HUMAN 1 5.0896 3.9231 KALDVSASDDEIARL-p C9JIF9;S187-p KALDVSASDDEIARL 0.301769380581339 0.047414281361207 -0.173666666666667 0.375 9.75630619320206 17.7164304571906 -0.173666666666667 0.375 0.105771674704246 0.016918309059511 -1.93940191656961 3.40237168064183 C9JIF9 NotFound C9JIF9.S187.p_NotFound C9JIF9_S187s _1_1_187_187 C9JIF9 C9JIF9|P13798 Acylamino-acid-releasing enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16037.16037.2 16.27 16.27 1.158 2 1 1 0 835.8957 1590.8172 S187s TMT10 181 (K) ALDVSAsDDEIAR (L) ALDVS(0.0)AS(0.99)DDEIAR s:Phosphorylated S APEH 82756.6 3 4 3299.1 54.52 HUMAN 1 -9.7563 17.7164 KALEEMESKEWLEKN-p Q9UBS8;S393-p KALEEMESKEWLEKN 0.055786125949693 0.465258195024242 -0.436666666666667 0.075 27.333506445752 4.43131967164118 -0.436666666666667 0.075 0.00184777614247485 0.360469092212174 -5.66011204159166 0.998547052668753 Q9UBS8 RNF14 Q9UBS8.S393.p_RNF14 Q9UBS8_S393s _1_1_393_393 Q9UBS8 Q9UBS8|Q9UBS8-2 E3 ubiquitin-protein ligase RNF14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14792.14792.2 11.9 4.76 99 1 1 1 0 737.867 1394.7601 S393s TMT10 387 (K) ALEEMEsK (E) ALEEMES(1.0)K K:TMT10,s:Phosphorylated S RNF14 55662.2 1 3 2286.1 89.63 HUMAN 1 -27.3335 4.4313 KALEVEESNSEDEAS-p Q03111;S359-p KALEVEESNSEDEAS 0.385312583745528 0.658693362980574 -0.154 -0.0513333333333333 7.66690213230492 2.48016564240162 -0.154 -0.0513333333333333 0.171123552193576 0.564915428203574 -1.57731797459548 -0.612617246455106 Q03111 MLLT1 Q03111.S359.p_MLLT1 Q03111_S359sS361s_2_2_359_361 Q03111 Q03111 Protein ENL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18616.18616.3 14.01 14.01 5.797 3 2 2 0 920.4405 2599.3706 S359s S361s TMT10 352 (K) KALEVEEsNsEDEASFK (S) KALEVEES(0.99)NS(0.99)EDEAS(0.0)FK K:TMT10,s:Phosphorylated S MLLT1 62454.4 2 9 685.1 243.68 HUMAN 1 -7.6669 -2.4802 KALFHQFSLKENWLQ-p A8MQ07;S375-p KALFHQFSLKENWLQ 0.116256621255214 0.963700909975935 -0.529 0.00466666666666667 19.4559992974393 0.229255580213679 -0.529 0.00466666666666667 0.0113344400632892 0.948581044685623 -3.76316236366655 0.0675287833556126 A8MQ07 RAPGEF5 A8MQ07.S375.p_RAPGEF5 A8MQ07_S375s _1_1_375_375 A8MQ07 A8MQ07|Q92565|Q92565-2 Rap guanine nucleotide exchange factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23276.23276.3 12.57 12.57 99 1 1 1 0 543.6387 1548.9303 S375s TMT10 369 (K) ALFHQFsLK (E) ALFHQFS(1.0)LK K:TMT10,s:Phosphorylated S RAPGEF5 85412.8 2 2 4997.1 24.03 HUMAN 1 -19.456 0.2293 KALGGAGSGSKGSAG-p A7E2V4-4;S593-p KALGGAGSGSKGSAG 0.177930575516201 0.112873804649909 0.216333333333333 -0.168666666666667 14.8492059360121 12.4954073295643 0.216333333333333 -0.168666666666667 0.0327400551320174 0.0562936316502774 2.85021717624613 -2.41926081769947 A7E2V4 ZSWIM8 A7E2V4.4.S593.p_ZSWIM8 A7E2V4-4_S593s _1_1_593_593 A7E2V4-4 A7E2V4-2|A7E2V4-4|A7E2V4-3|S4R410|A7E2V4-5|S4R393|S4R3H3|H7BZ52 Isoform 4 of Zinc finger SWIM domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9011.9011.2 12.76 7.29 2.145 2 1 1 0 671.8607 1262.7469 S593s TMT10 587 (K) ALGGAGsGSK (G) ALGGAGS(0.99)GS(0.0)K K:TMT10,s:Phosphorylated S ZSWIM8 199945.4 2 6 805.1 222.5 HUMAN 1 14.8492 -12.4954 KALGGEDSENEEELG-p Q9BQG0-2;S775-p KALGGEDSENEEELG 0.765506494779977 0.0899562988236574 0.042 0.183666666666667 2.22868031823786 13.842467443918 0.042 0.183666666666667 0.598593460798325 0.04128128957212 0.55886979902351 2.66246515700523 Q9BQG0 MYBBP1A Q9BQG0.2.S775.p_MYBBP1A Q9BQG0-2_S775s_1_1_775_775 Q9BQG0-2 Q9BQG0-2 Isoform 2 of Myb-binding protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.37222.37823.3 26.83 26.83 0 3 1 1 0 1361.2873 3985.8935 S775s M787m TMT10 769 (K) ALGGEDsENEEELGDEAMmALDQSLASLFAEQK (L) ALGGEDS(0.99)ENEEELGDEAM(0.50)M(0.50)ALDQS(0.0)LAS(0.0)LFAEQK K:TMT10,s:Phosphorylated S,m:Oxidized methionine MYBBP1A 150334.3 88 2 297.1 378.74 HUMAN 1 2.2287 13.8425 KALGKNRSADFNPDF-p B7Z6D5;S48-p KALGKNRSADFNPDF 0.752168042045597 0.733478835192759 0.0446666666666667 -0.0403333333333333 2.3587366731682 1.8566554148886 0.0446666666666667 -0.0403333333333333 0.58093338167478 0.652130418871285 0.586858676476398 -0.476764100718914 B7Z6D5 NotFound B7Z6D5.S48.p_NotFound B7Z6D5_S48s _1_1_48_48 B7Z6D5 Q96GQ7|B7Z6D5|A0A087WYH5 Probable ATP-dependent RNA helicase DDX27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22868.22868.3 15.31 15.31 11.022 2 1 1 0 775.7156 2245.1654 S48s TMT10 46 (K) NRsADFNPDFVFTEK (E) NRS(0.99)ADFNPDFVFT(0.0)EK K:TMT10,s:Phosphorylated S DDX27 87002.4 3 2 2685.1 73.99 HUMAN 1 2.3587 -1.8567 KALKGLGSSPDLELL-p Q9NQQ7-3;S364-p KALKGLGSSPDLELL 0.471067248334803 0.110934425440995 0.097 0.193 6.03458958028584 12.605970963238 0.097 0.193 0.249195985689096 0.0548785848440261 1.29072310726858 2.43901149649296 Q9NQQ7 SLC35C2 Q9NQQ7.3.S364.p_SLC35C2 Q9NQQ7-3_S364s _1_1_364_364 Q9NQQ7-3 Q9NQQ7-3|Q9NQQ7-2 Isoform 3 of Solute carrier family 35 member C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31757.31757.2 12.6 12.6 1.11 2 1 1 0 839.9537 1598.9315 S364s TMT10 361 (K) GLGsSPDLELLLR (S) GLGS(0.99)S(0.0)PDLELLLR s:Phosphorylated S SLC35C2 43620.6 10 1 5977.1 14.91 HUMAN 1 6.0346 12.606 KALLRQQTQSALEQR-p Q86YS7-3;T339-p KALLRQQTQSALEQR 0.30302394738 0.0290451226111647 0.264333333333333 0.475 9.7189126898579 20.8083219677871 0.264333333333333 0.475 0.106686319023892 0.00830171468198756 1.93291470603691 4.05062526249177 Q86YS7 C2CD5 Q86YS7.3.T339.p_C2CD5 Q86YS7-3_T339t _1_1_339_339 Q86YS7-3 Q86YS7-5|Q86YS7-4|Q86YS7-3|Q86YS7-2 Isoform 3 of C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5634.5634.2 13.91 9.23 2.153 2 1 1 0 749.3663 1417.7597 T339t TMT10 337 (R) QQtQSALEQR (E) QQT(0.99)QS(0.0)ALEQR t:Phosphorylated T C2CD5 117622.7 1 9 349.1 351.16 HUMAN 1 9.7189 20.8083 KALPASETPKAAESE-p O76021;T415-p KALPASETPKAAESE 0.0869754461573755 0.00735907798960688 -0.530666666666667 -0.585 22.6063321902287 30.5061668196256 -0.530666666666667 -0.585 0.00548740204752665 0.000889986293137358 -4.46197644167669 -6.57695928307331 O76021 RSL1D1 O76021.T415.p_RSL1D1 O76021_T415t _1_1_415_415 O76021 O76021|O76021-2 Ribosomal L1 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11336.11336.3 7.05 6.2 1.114 2 1 1 0 484.6021 1371.8248 T415t TMT10 409 (K) ALPASEtPK (A) ALPAS(0.0)ET(0.99)PK K:TMT10,t:Phosphorylated T RSL1D1 55199.7 2 7 643.1 254.92 HUMAN 1 -22.6063 -30.5062 KALQHTESPSETNKP-p Q14669-3;S142-p KALQHTESPSETNKP 0.790000475046438 0.00847965722527311 -0.047 -0.485666666666667 1.97627329518695 29.4062653218599 -0.047 -0.485666666666667 0.634413871779353 0.00114649843914688 -0.503541156957039 -6.24385290063825 Q14669 TRIP12 Q14669.3.S142.p_TRIP12 Q14669-3_S142s _1_1_142_142 Q14669-3 Q14669-3|Q14669-2|G5E9G6 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5936.5936.5 17.97 13.81 1.172 5 1 1 0 532.4831 2578.4192 S142s TMT10 136 (K) ALQHTEsPSETNKPHSK (S) ALQHT(0.0)ES(0.99)PS(0.0)ET(0.0)NKPHS(0.0)K K:TMT10,s:Phosphorylated S TRIP12 227456.1 4 4 234.1 420.47 HUMAN 1 -1.9763 -29.4063 KALQLSNSPGASSAF-p Q12802-2;S983-p KALQLSNSPGASSAF 0.307172848614777 0.0269795278806559 -0.293666666666667 -0.328333333333333 9.58488356325326 21.2949989232063 -0.293666666666667 -0.328333333333333 0.110030134458641 0.0074216438175178 -1.90967180616586 -4.15833179352702 Q12802 AKAP13 Q12802.2.S983.p_AKAP13 Q12802-2_S983s _1_1_983_983 Q12802-2 Q12802-2|Q12802-4 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24663.24663.2 19.11 16.3 2.558 4 1 1 0 1065.0739 2049.1745 S983s TMT10 977 (K) ALQLSNsPGASSAFLK (A) ALQLS(0.0)NS(0.99)PGAS(0.0)S(0.0)AFLK K:TMT10,s:Phosphorylated S AKAP13 310921 3 6 66.1 683.25 HUMAN 1 -9.5849 -21.295 KALQRQNSEGSASKV-p Q9UJM3;S369-p KALQRQNSEGSASKV 0.0721955710812666 0.00386284115262954 -0.405333333333333 -0.681 24.5801886074014 35.6826113447879 -0.405333333333333 -0.681 0.00348322187611662 0.000270233300493997 -4.93823123199451 -8.34893251085307 Q9UJM3 ERRFI1 Q9UJM3.S369.p_ERRFI1 Q9UJM3_S369s _1_1_369_369 Q9UJM3 Q9UJM3 ERBB receptor feedback inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24248.24248.4 17.2 17.2 2.141 3 1 1 0 842.2227 3285.9011 S369s TMT10 367 (R) QNsEGSASKVPCILPIIENGKK (V) QNS(0.99)EGS(0.0)AS(0.0)KVPCILPIIENGKK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ERRFI1 51186.7 13 5 1507.1 135.54 HUMAN 1 -24.5802 -35.6826 KALTHNGTPRNAI__-p Q9HB90;T394-p KALTHNGTPRNAI__ 0.0683636000573323 0.00210285200041402 -0.828333333333333 -0.941 25.1511261215348 41.6451140137018 -0.828333333333333 -0.941 0.00305412907771594 6.84681508168295e-05 -5.0821544902032 -10.896639494634 Q9HB90 RRAGC Q9HB90.T394.p_RRAGC Q9HB90_T394t _1_1_394_394 Q9HB90 Q9HB90 Ras-related GTP-binding protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3868.3868.2 13.96 5.99 4.325 2 1 1 0 638.3229 1195.6745 T394t TMT10 388 (K) ALTHNGtPR (N) ALT(0.0)HNGT(0.99)PR t:Phosphorylated T RRAGC 44622.6 8 4 2701.1 73.48 HUMAN 1 -25.1511 -41.6451 KAMFESQSEDELTPF-p P12956;S53-p KAMFESQSEDELTPF 0.367764715604621 0.015883034212558 0.125666666666667 0.457333333333333 8.05877204132202 24.860752771078 0.125666666666667 0.457333333333333 0.15635896818984 0.00326531228973476 1.64535448808283 5.00239762678972 P12956 XRCC6 P12956.S53.p_XRCC6 P12956_S53s _1_1_53_53 P12956 P12956 X-ray repair cross-complementing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36996.36996.4 21.94 18.55 1.867 7 1 1 0 956.1994 3741.8102 S53s TMT10 47 (K) AMFESQsEDELTPFDMSIQCIQSVYISK (I) AMFES(0.0)QS(0.99)EDELT(0.0)PFDMS(0.0)IQCIQS(0.0)VY(0.0)IS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S XRCC6 70127.1 3 5 815.1 220.5 HUMAN 1 8.0588 24.8608 KAMGIMNSFVNDIFE-p U3KQK0;S65-p KAMGIMNSFVNDIFE 0.893026284358234 0.539003991872121 0.0263333333333333 0.0676666666666667 0.962366319950613 3.61140555793352 0.0263333333333333 0.0676666666666667 0.801241375804438 0.435370946699654 0.264411590736514 0.84194752894003 U3KQK0 NotFound U3KQK0.S65.p_NotFound U3KQK0_S65s _1_1_65_65 U3KQK0 U3KQK0|Q5QNW6-2|P57053|P33778|P62807|P58876|Q93079|P06899|O60814|Q99880|Q99879|Q99877|P23527|Q16778|Q8N257 Histone H2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36967.36967.2 19.42 19.42 99 1 1 1 0 1026.9768 1972.9822 S65s TMT10 59 (K) AMGIMNsFVNDIFER (I) AMGIMNS(1.0)FVNDIFER s:Phosphorylated S HIST1H2BN 18803.6 11 7 2194.1 93.83 HUMAN 1 0.9624 3.6114 KAMKGLGTDEDTIID-p P08133;T381-p KAMKGLGTDEDTIID 0.957883419334791 0.24607323963245 -0.00800000000000001 0.14 0.3626027234542 8.02517356712825 -0.00800000000000002 0.14 0.919898112301416 0.157573304682863 -0.105343462614888 1.63900606089703 P08133 ANXA6 P08133.T381.p_ANXA6 P08133_T381t _1_1_381_381 P08133 P08133|P08133-2|E5RK69 Annexin A6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34615.34615.3 17.57 17.57 1.184 3 1 1 0 693.3513 1998.0705 T381t TMT10 378 (K) GLGtDEDTIIDIITHR (S) GLGT(0.99)DEDT(0.0)IIDIIT(0.0)HR t:Phosphorylated T ANXA6 76214.3 1 6 1878.1 109.53 HUMAN 1 -0.3626 8.0252 KANFDKESERHFIMQ-p Q14974;S213-p KANFDKESERHFIMQ 0.66473066128024 0.00580120755760381 0.0633333333333333 0.491666666666667 3.31776328020505 32.3358142497055 0.0633333333333334 0.491666666666667 0.465825943184942 0.000584007702436373 0.784246590539848 7.16297246383947 Q14974 KPNB1 Q14974.S213.p_KPNB1 Q14974_S213s _1_1_213_213 Q14974 Q14974|Q14974-2 Importin subunit beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26582.26582.4 15.52 11.53 8.337 3 1 1 0 927.4356 3626.7554 S213s TMT10 207 (K) ANFDKEsERHFIMQVVCEATQCPDTR (V) ANFDKES(0.99)ERHFIMQVVCEAT(0.0)QCPDT(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S KPNB1 98480.7 1 2 4368.1 32.65 HUMAN 1 3.3178 32.3358 KANRDLIYKQLQQAV-p P35221-2;Y245-p KANRDLIYKQLQQAV 0.704636067514992 0.703280137856366 0.0746666666666667 0.0680000000000001 2.85760577168941 2.10150799203103 0.0746666666666667 0.0680000000000001 0.517892262837771 0.616380939980254 0.691338993500605 0.531103351446021 P35221 CTNNA1 P35221.2.Y245.p_CTNNA1 P35221-2_Y245y _1_1_245_245 P35221-2 P35221-2|G3XAM7 Isoform 2 of Catenin alpha-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12912.12964.3 10.09 10.09 99 1 1 1 0 510.954 1450.8782 Y245y TMT10 239 (K) ANRDLIyK (Q) ANRDLIY(1.0)K K:TMT10,y:Phosphorylated Y CTNNA1 103489.3 2 1 32.1 58.12 HUMAN 1 2.8576 2.1015 KAPAPKASGKKA___-p P50914;S211-p KAPAPKASGKKA___ 0.0926681628012438 0.0442735058048337 0.547666666666667 -0.301333333333333 21.9822179891636 18.1270183288959 0.547666666666667 -0.301333333333333 0.00633546069750514 0.0153921103087677 4.31786419146738 -3.48513848010612 P50914 RPL14 P50914.S211.p_RPL14 P50914_S211s _1_1_211_211 P50914 P50914 60S ribosomal protein L14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7180.7180.3 8.63 8.63 99 1 1 1 0 531.9818 1513.9669 S211s TMT10 205 (K) APAPKAsGK (K) APAPKAS(1.0)GK K:TMT10,s:Phosphorylated S RPL14 23545.5 1 2 4488.1 30.78 HUMAN 1 21.9822 -18.127 KAPCRAGTEDEEEEE-p O95456;T18-p KAPCRAGTEDEEEEE 0.232400494053917 0.20297037548925 0.212 -0.138 12.1832555432048 9.11065993133134 0.212 -0.138 0.0604887271266333 0.122725273004011 2.36488178355919 -1.8268544459864 O95456 PSMG1 O95456.T18.p_PSMG1 O95456_T18t _1_1_18_18 O95456 O95456|O95456-2|F8WBH7 Proteasome assembly chaperone 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3352.3352.4 13.1 13.1 13.102 2 1 1 0 707.5453 2747.1987 T18t Hydrogen 16 (R) AGtEDEEEEEEGRRETPEDREVR (L) AGT(0.99)EDEEEEEEGRRET(0.0)PEDREVR t:Phosphorylated T PSMG1 33652.1 2 1 3489.1 49.83 HUMAN 1 12.1833 -9.1107 KAPDFVFYAPRLRIN-p P35241-5;Y270-p KAPDFVFYAPRLRIN 0.397712293061704 0.024488748385605 -0.127333333333333 0.297333333333333 7.39157550902033 21.9349973987454 -0.127333333333333 0.297333333333333 0.182323415972903 0.00640472165187084 -1.52939718796592 4.3025481966576 P35241 RDX P35241.5.Y270.p_RDX P35241-5_Y270y _1_1_270_270 P35241-5 P35241-5|P15311|E7EQR4|P26038|P35241-4 Isoform 5 of Radixin GG20160819_MSz_CCLE_T4D7_pY_Injection_02.23321.23370.3 10.64 10.64 99 1 1 1 0 616.9996 1769.015 Y270y TMT10 263 (K) KAPDFVFyAPR (L) KAPDFVFY(1.0)APR K:TMT10,y:Phosphorylated Y RDX 71218.8 1 1 328.1 10.64 HUMAN 1 -7.3916 21.935 KAPEKRASPSKPASA-p E7EVA0;S1932-p KAPEKRASPSKPASA 0.253349609310592 0.0020346511457182 0.206333333333333 -1.27466666666667 11.367753448092 42.0536792577108 0.206333333333333 -1.27466666666667 0.0729834947260832 6.23206643326228e-05 2.22066663893659 -11.0947836732749 E7EVA0 NotFound E7EVA0.S1932.p_NotFound E7EVA0_S1932s _1_1_1932_1932 E7EVA0 E7EVA0|P27816|P27816-6 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5293.5293.3 13.29 5.8 1.414 4 1 1 0 588.9851 1684.9746 S1932s TMT10 1931 (R) AsPSKPASAPASR (S) AS(0.99)PS(0.0)KPAS(0.0)APAS(0.0)R K:TMT10,s:Phosphorylated S MAP4 246695.2 10 33 38.1 865.62 HUMAN 1 11.3678 -42.0537 KAPETDDSFSDVDCH-p Q68D20;S159-p KAPETDDSFSDVDCH 0.55888995164706 0.628568358499939 -0.117666666666667 0.047 4.66412866094396 2.74160362911044 -0.117666666666667 0.047 0.341654491054902 0.53191181496266 -1.04213201878553 0.667332849526271 Q68D20 NotFound Q68D20.S159.p_NotFound Q68D20_S159s _1_1_159_159 Q68D20 Q68D20 Protein PMS2CL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11879.11879.4 16.64 16.64 1.17 5 1 1 0 788.8303 3072.3199 S159s TMT10 153 (K) APETDDsFSDVDCHSNQEDTGCK (F) APET(0.0)DDS(0.99)FS(0.0)DVDCHS(0.0)NQEDT(0.0)GCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PMS2CL 21136.4 1 8 1932.2 106.31 HUMAN 1 -4.6641 2.7416 KAPHLHST_______-p P31276;T330-p KAPHLHST_______ 0.650445543785058 0.553256120321649 0.0823333333333333 -0.0716666666666667 3.50331980963419 3.46240837223197 0.0823333333333333 -0.0716666666666667 0.446342271244981 0.450566774255039 0.820912634007762 -0.812740152505328 P31276 HOXC13 P31276.T330.p_HOXC13 P31276_T330t _1_1_330_330 P31276 P31276 Homeobox protein Hox-C13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.4629.4629.3 7.31 7.31 1.841 3 1 1 0 505.941 1435.8422 T330t TMT10 322 (K) SKAPHLHSt (-) S(0.0)KAPHLHS(0.0)T(0.99) K:TMT10,t:Phosphorylated T HOXC13 35777.5 2 2 4530.1 30.27 HUMAN 1 3.5033 -3.4624 KAPKIGFSGPKLEGG-p Q09666;S4933-p KAPKIGFSGPKLEGG 0.145152146047681 0.0036981515606232 -0.58 0.658666666666667 17.0818954655788 36.0880268701881 -0.58 0.658666666666667 0.0195798992800998 0.000246148567675457 -3.2787822577189 8.50351076296789 Q09666 AHNAK Q09666.S4933.p_AHNAK Q09666_S4933s _1_1_4933_4933 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24706.24706.3 15.47 8.95 99 1 1 1 0 805.1157 2333.3684 S4933s TMT10 4930 (K) IGFsGPKLEGGEVDLK (G) IGFS(1.0)GPKLEGGEVDLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 110 1.1 4313.36 HUMAN 1 -17.0819 36.088 KAPLHNLTYELPTLN-p Q6P0N0;T218-p KAPLHNLTYELPTLN 0.526200689779778 0.777744994101096 0.0893333333333333 -0.0336666666666666 5.15905679132477 1.51083535513079 0.0893333333333333 -0.0336666666666667 0.304855700890639 0.706181708822577 1.13312780081162 -0.397482591590687 Q6P0N0 MIS18BP1 Q6P0N0.T218.p_MIS18BP1 Q6P0N0_T218t_1_1_218_218 Q6P0N0 Q6P0N0|G5E9K5|Q6P0N0-2 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27659.27659.5 20.45 20.45 4.089 3 1 1 0 736.3901 3596.9477 T218t N225n TMT10 211 (K) KAPLHNLtYELPTLnQEQENFLAVEAR (N) KAPLHN(0.0)LT(0.99)Y(0.0)ELPT(0.0)LN(0.99)QEQEN(0.0)FLAVEAR K:TMT10,t:Phosphorylated T,n:Deamidated MIS18BP1 129996 2 12 54.1 728.39 HUMAN 1 5.1591 -1.5108 KAPPPPISPTQLSDV-p Q9P0K7;S281-p KAPPPPISPTQLSDV 0.635834535480406 0.30836558532538 -0.0866666666666667 -0.0973333333333333 3.66760471177526 6.75266348877141 -0.0866666666666667 -0.0973333333333333 0.429773396693717 0.211219325351468 -0.853033614757392 -1.41726716526624 Q9P0K7 RAI14 Q9P0K7.S281.p_RAI14 Q9P0K7_S281s _1_1_281_281 Q9P0K7 Q9P0K7-2|Q9P0K7-3 Ankycorbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16044.16044.3 13.7 11.46 1.122 5 1 1 0 761.736 2203.2284 S281s Hydrogen 274 (R) KAPPPPIsPTQLSDVSSPR (S) KAPPPPIS(0.99)PT(0.0)QLS(0.0)DVS(0.0)S(0.0)PR K:TMT10-Lys-Only,s:Phosphorylated S RAI14 110666.9 2 5 498.1 292.24 HUMAN 1 -3.6676 -6.7527 KAPRAIDSPGGAVRE-p O60346;S425-p KAPRAIDSPGGAVRE 0.146674740935683 0.00208613045115636 -0.246666666666667 -0.799333333333333 16.9440376506379 41.749035097414 -0.246666666666667 -0.799333333333333 0.0202113924486113 6.68492424732779e-05 -3.25162064499238 -10.9467256125615 O60346 PHLPP1 O60346.S425.p_PHLPP1 O60346_S425s _1_1_425_425 O60346 O60346 PH domain leucine-rich repeat-containing protein phosphatase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9135.9135.2 7.2 3.98 99 1 1 1 0 626.3184 1171.6633 S425s TMT10 422 (R) AIDsPGGAVR (E) AIDS(1.0)PGGAVR s:Phosphorylated S PHLPP1 187065.4 1 3 2752.1 71.8 HUMAN 1 -16.944 -41.749 KAPRGDVTAEEAAGA-p P49006;T14-p KAPRGDVTAEEAAGA 0.334991410736759 0.36575802440562 -0.214666666666667 -0.099 8.86200559342359 5.79119338593826 -0.214666666666667 -0.099 0.129956929190197 0.263560705505153 -1.78447562998989 -1.2469886098957 P49006 MARCKSL1 P49006.T14.p_MARCKSL1 P49006_T14t _1_1_14_14 P49006 P49006 MARCKS-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11323.11323.2 19.97 19.97 9.824 2 1 1 0 956.4774 1831.9802 T14t TMT10 11 (R) GDVtAEEAAGASPAK (A) GDVT(0.99)AEEAAGAS(0.0)PAK K:TMT10,t:Phosphorylated T MARCKSL1 19585.5 5 1 402.1 327.42 HUMAN 1 -8.862 -5.7912 KAPRPFGSVSSPKVT-p Q96HC4;S134-p KAPRPFGSVSSPKVT 0.425791532168232 0.561638266089434 0.106333333333333 -0.0703333333333333 6.83221477035483 3.37584354225555 0.106333333333333 -0.0703333333333333 0.207385564415328 0.459637703150149 1.43161013864842 -0.795649143125121 Q96HC4 PDLIM5 Q96HC4.S134.p_PDLIM5 Q96HC4_S134s _1_1_134_134 Q96HC4 Q96HC4 PDZ and LIM domain protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13351.13351.3 9.57 9.57 1.191 3 1 1 0 589.991 1687.9896 S134s TMT10 128 (K) APRPFGsVSSPK (V) APRPFGS(0.99)VS(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S PDLIM5 65142.1 1 2 2505.1 80.72 HUMAN 1 6.8322 -3.3758 KAPSAARSLPSASTS-p Q9UQN3;S187-p KAPSAARSLPSASTS 0.918023912043584 0.721994204209091 0.0253333333333333 -0.146333333333333 0.725621912180686 1.94761309877691 0.0253333333333333 -0.146333333333333 0.846131393632049 0.638614374974407 0.203562875732752 -0.497111910032669 Q9UQN3 CHMP2B Q9UQN3.S187.p_CHMP2B Q9UQN3_S187s _1_1_187_187 Q9UQN3 Q9UQN3|C9J0A7|Q9UQN3-2 Charged multivesicular body protein 2b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9249.9249.3 12.9 12.9 1.205 6 1 1 0 657.0224 1889.0856 S187s TMT10 181 (K) APSAARsLPSASTSK (A) APS(0.0)AARS(0.99)LPS(0.0)AS(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CHMP2B 23963.2 1 1 3305.1 54.38 HUMAN 1 0.7256 -1.9476 KAPSERRSPERLKHY-p Q9NRR4;S221-p KAPSERRSPERLKHY 0.867209281163478 0.865182979819933 0.0303333333333333 -0.0376666666666666 1.20529434044136 0.886058820479984 0.0303333333333333 -0.0376666666666666 0.757653381629011 0.815443955681856 0.324610150838838 -0.245024322771161 Q9NRR4 DROSHA Q9NRR4.S221.p_DROSHA Q9NRR4_S221s _1_1_221_221 Q9NRR4 Q9NRR4|Q9NRR4-4|Q9NRR4-2|Q9NRR4-3 Ribonuclease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4263.4263.5 9.92 9.92 1.883 2 1 1 0 393.6222 1884.118 S221s TMT10 215 (K) APSERRsPERLK (H) APS(0.0)ERRS(0.99)PERLK K:TMT10,s:Phosphorylated S DROSHA 160910.7 2 1 1630.1 125.18 HUMAN 1 1.2053 -0.8861 KAPSRQISLPDLSQE-p Q15390;S119-p KAPSRQISLPDLSQE 0.916228723727521 0.94529445000064 -0.0153333333333333 0.00766666666666667 0.74112585922458 0.352665693141236 -0.0153333333333333 0.00766666666666669 0.843116161121638 0.922005327923134 -0.207619529516811 0.102551082920681 Q15390 MTFR1 Q15390.S119.p_MTFR1 Q15390_S119s _1_1_119_119 Q15390 Q15390|Q15390-2 Mitochondrial fission regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28059.28059.4 24.08 24.08 3.157 3 1 1 0 940.2634 3678.0569 S119s TMT10 117 (R) QIsLPDLSQEEPQLKTPALANEEALQK (I) QIS(0.99)LPDLS(0.0)QEEPQLKT(0.0)PALANEEALQK K:TMT10,s:Phosphorylated S MTFR1 37171 13 1 2235.1 92.35 HUMAN 1 -0.7411 0.3527 KAPTNEFYA______-p P31431;Y197-p KAPTNEFYA______ 0.139309018176778 0.0194985571847109 0.329333333333333 -0.397333333333333 17.5176053868984 23.4777255070574 0.329333333333333 -0.397333333333333 0.0177108523019488 0.00448980469029113 3.36528737551669 -4.66291483560597 P31431 SDC4 P31431.Y197.p_SDC4 P31431_Y197y _1_1_197_197 P31431 P31431 Syndecan-4 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.15387.15610.2 20.7 20.7 20.697 2 1 1 0 789.9022 1498.8306 Y197y TMT10 190 (K) KAPTNEFyA (-) KAPT(0.0)NEFY(0.99)A K:TMT10,y:Phosphorylated Y SDC4 21641.2 2 1 162.1 20.7 HUMAN 1 17.5176 -23.4777 KAPVDFGYVGIDSIL-p Q9UHD8;Y278-p KAPVDFGYVGIDSIL 0.702380338642873 0.0509012795530668 -0.0653333333333333 0.39 2.88408892441526 17.272110011431 -0.0653333333333334 0.39 0.514743780133916 0.0187408376683195 -0.696769491451418 3.31384701757425 Q9UHD8 SEPT9 Q9UHD8.Y278.p_SEPT9 Q9UHD8_Y278y _1_1_278_278 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37336.37336.3 25.69 25.69 15.782 2 1 1 0 773.7144 2239.163 Y278y TMT10 272 (K) APVDFGyVGIDSILEQMR (R) APVDFGY(0.99)VGIDS(0.0)ILEQMR y:Phosphorylated Y SEPT9 65685.6 1 20 110.1 572.91 HUMAN 1 -2.8841 17.2721 KAQAKTASELSKSME-p Q5BJF6-4;S331-p KAQAKTASELSKSME 0.957092524100683 0.0147104912964376 0.00866666666666665 -0.382666666666667 0.374289215200467 25.3746483163454 0.00866666666666665 -0.382666666666667 0.917426072952036 0.00290091610001293 0.108609426098715 -5.13276196765904 Q5BJF6 ODF2 Q5BJF6.4.S331.p_ODF2 Q5BJF6-4_S331s _1_1_331_331 Q5BJF6-4 Q5BJF6|Q5BJF6-4|Q5BJF6-3|Q5BJF6-2|Q5BJF6-7|Q5BJF6-6|Q5BJF6-10|Q5BJF6-5|Q5BJF6-8|Q5BJF6-9 Isoform 4 of Outer dense fiber protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10124.10124.2 9.87 1.66 2.864 3 1 1 0 637.3441 1193.7142 S331s TMT10 329 (K) TAsELSK (S) T(0.0)AS(0.99)ELS(0.0)K K:TMT10,s:Phosphorylated S ODF2 96031.2 1 7 853.1 211.96 HUMAN 1 0.3743 -25.3746 KAQAKVGSLDNVGHL-p E7EVA0;S2218-p KAQAKVGSLDNVGHL 0.244862108764088 0.0100428376659752 -0.195333333333333 0.416666666666667 11.6853426698436 28.0763640411126 -0.195333333333333 0.416666666666667 0.0678368593308671 0.00155726884778492 -2.27664428833783 5.85903086060069 E7EVA0 NotFound E7EVA0.S2218.p_NotFound E7EVA0_S2218s_1_1_2218_2218 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2|P27816-4|F8W9U4|P27816-5 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19436.19436.3 17.77 17.77 99 1 1 1 0 710.7176 2049.1857 S2218s N2221n TMT10 2216 (K) VGsLDnVGHLPAGGAVK (T) VGS(1.0)LDN(1.0)VGHLPAGGAVK K:TMT10,s:Phosphorylated S,n:Deamidated MAP4 246695.2 13 42 38.1 865.62 HUMAN 1 -11.6853 28.0764 KAQDLALSLAQTKAS-p Q9BV73;S2179-p KAQDLALSLAQTKAS 0.0658837618616825 0.0512048930782848 0.416333333333333 -0.633 25.472318832375 17.2276680165474 0.416333333333333 -0.633 0.00283640418026846 0.0189336000249932 5.16440388727401 -3.30505063971908 Q9BV73 CEP250 Q9BV73.S2179.p_CEP250 Q9BV73_S2179s _1_1_2179_2179 Q9BV73 Q9BV73|Q9BV73-2 Centrosome-associated protein CEP250 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21961.21961.3 13.76 13.76 4.394 2 1 1 0 599.6682 1717.026 S2179s TMT10 2173 (K) AQDLALsLAQTK (A) AQDLALS(0.99)LAQT(0.0)K K:TMT10,s:Phosphorylated S CEP250 282045.1 1 4 1169.1 170.36 HUMAN 1 25.4723 -17.2277 KAQEIERTPPTNFKR-p O15297;T529-p KAQEIERTPPTNFKR 0.426535703473181 0.0037766865518865 0.123333333333333 -0.601 6.81466672898507 35.9223720265765 0.123333333333333 -0.601 0.208225218797194 0.000255718882180671 1.42853099272149 -8.44004833342345 O15297 PPM1D O15297.T529.p_PPM1D O15297_T529t _1_1_529_529 O15297 O15297 Protein phosphatase 1D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13059.13059.3 14.14 7.01 3.657 2 1 1 0 690.3673 1989.1169 T529t TMT10 523 (K) AQEIERtPPTNFK (R) AQEIERT(0.99)PPT(0.0)NFK K:TMT10,t:Phosphorylated T PPM1D 67415.7 2 3 2190.1 93.98 HUMAN 1 6.8147 -35.9224 KAQHPDYSFGELSRL-p Q86U86;S1405-p KAQHPDYSFGELSRL 0.373378814785124 0.0197123423703082 -0.145333333333333 -0.322 7.92987143997541 23.4040060893035 -0.145333333333333 -0.321804026509852 0.161069331427987 0.00456666749350265 -1.62299277471085 -4.64526759442711 Q86U86 PBRM1 Q86U86.S1405.p_PBRM1 Q86U86_S1405s _1_1_1405_1405 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-9|Q86U86-3|Q86U86-7|Q86U86-4|Q86U86-5 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13867.13867.3 19.11 13.19 4.919 3 1 1 0 605.9476 1735.8601 S1405s TMT10 1399 (K) AQHPDYsFGELSR (L) AQHPDY(0.0)S(0.99)FGELS(0.0)R s:Phosphorylated S PBRM1 194199.5 3 19 194.1 462.54 HUMAN 1 -7.9299 -23.404 KAQKVSRSLTEGEMK-p O94885;S387-p KAQKVSRSLTEGEMK 0.0658357655531435 0.972900041531255 -0.652 -0.00533333333333331 25.5355858174779 0.167695836145855 -0.652 -0.00533333333333331 0.0027953836343618 0.962122600348744 -5.18071573567982 -0.0497241105541194 O94885 SASH1 O94885.S387.p_SASH1 O94885_S387s _1_1_387_387 O94885 O94885 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9041.9041.2 12.51 12.51 2.869 2 1 1 0 780.9094 1480.8445 S387s Hydrogen 387 (R) sLTEGEMKK (G) S(0.99)LT(0.0)EGEMKK K:TMT10-Lys-Only,s:Phosphorylated S SASH1 137734.8 5 6 295.1 379.69 HUMAN 1 -25.5356 -0.1677 KAQSLVISPPAPSPR-p P46013;S579-p KAQSLVISPPAPSPR 0.313651065742365 0.0191882980304254 -0.183 -0.345 9.41888621433951 23.6042706562225 -0.183 -0.345 0.11431714733844 0.0043608679322549 -1.8809024191476 -4.69331095289466 P46013 MKI67 P46013.S579.p_MKI67 P46013_S579s _1_1_579_579 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17988.17988.2 16.41 16.41 2.351 3 1 1 0 864.9671 1648.9584 S579s TMT10 573 (K) AQSLVIsPPAPSPR (K) AQS(0.0)LVIS(0.99)PPAPS(0.0)PR s:Phosphorylated S MKI67 360912.4 6 12 5.1 1918.46 HUMAN 1 -9.4189 -23.6043 KAQVEIVTDGEEPAE-p P40121;T212-p KAQVEIVTDGEEPAE 0.839951610552414 0.0253160001297539 0.0453333333333333 0.339 1.46368041237844 21.7293062359853 0.0453333333333334 0.339 0.713891085321307 0.00671536118940982 0.386458242146147 4.25587231839895 P40121 CAPG P40121.T212.p_CAPG P40121_T212t _1_1_212_212 P40121 P40121 Macrophage-capping protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31064.31064.5 13.22 13.22 99 1 1 1 0 706.7896 3449.9533 T212t TMT10 206 (K) AQVEIVtDGEEPAEMIQVLGPKPALK (E) AQVEIVT(1.0)DGEEPAEMIQVLGPKPALK K:TMT10,t:Phosphorylated T CAPG 38783.1 1 2 3455.1 50.51 HUMAN 1 1.4637 21.7293 KAQVSPQS_______-p A9Z1X7;S913-p KAQVSPQS_______ 0.10854647135141 0.987229927153308 2.181 -0.0133333333333334 20.2199732387493 0.0839219567730863 2.181 -0.0133333333333333 0.00950610651306486 0.980861762073248 3.92631883311075 -0.0251148730440518 A9Z1X7 NotFound A9Z1X7.S913.p_NotFound A9Z1X7_S913s _1_1_913_913 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6387.6387.2 14.24 14.24 2.624 2 1 1 0 691.8757 1302.7782 S913s TMT10 906 (R) KAQVSPQs (-) KAQVS(0.0)PQS(0.99) K:TMT10,s:Phosphorylated S SRRM1 103445.7 2 52 8.1 1346.57 HUMAN 1 20.22 -0.0839 KARLLKVSPQQPGPS-p O14645;S34-p KARLLKVSPQQPGPS 0.898522472312718 0.0340853782254752 -0.0193333333333333 -0.309333333333333 0.909787857619983 19.7745984816303 -0.0193333333333333 -0.309333333333333 0.811000672313154 0.0105327106072019 -0.251094022712669 -3.8272130224642 O14645 DNALI1 O14645.S34.p_DNALI1 O14645_S34s _1_1_34_34 O14645 O14645 Axonemal dynein light intermediate polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18327.18327.3 17.55 17.55 1.967 3 1 1 0 927.5283 2700.6015 S34s TMT10 30 (R) LLKVsPQQPGPSGSAPQPPK (T) LLKVS(0.99)PQQPGPS(0.0)GS(0.0)APQPPK K:TMT10,s:Phosphorylated S DNALI1 29946.7 2 2 4815.1 26.31 HUMAN 1 -0.9098 -19.7746 KARPSAHSPGKKTPA-p O15417;S2716-p KARPSAHSPGKKTPA 0.26421550293066 0.00983553432674543 0.245 -0.501 10.9639686488845 28.2489686321391 0.245 -0.501 0.0800945812429002 0.00149659102616789 2.14979813379959 -5.90790792179477 O15417 TNRC18 O15417.S2716.p_TNRC18 O15417_S2716s _1_1_2716_2716 O15417 O15417|H9KVB4 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3149.3149.4 9.49 9.49 9.485 2 1 1 0 387.2129 1465.864 S2716s TMT10 2710 (K) ARPSAHsPGK (K) ARPS(0.0)AHS(0.99)PGK K:TMT10,s:Phosphorylated S TNRC18 316168 2 30 75.1 647.68 HUMAN 1 10.964 -28.249 KARSQSVSPSKQAAP-p Q12872-2;S922-p KARSQSVSPSKQAAP 0.113413178970906 0.0417217648713714 0.326666666666667 0.451 19.7201795229191 18.4894906081591 0.326666666666667 0.451 0.0106655203259923 0.0141595985070554 3.81915356754622 3.55900103780302 Q12872 SFSWAP Q12872.2.S922.p_SFSWAP Q12872-2_S918sS920sS922s_3_3_918_922 Q12872-2 Q12872-2 Isoform 2 of Splicing factor, suppressor of white-apricot homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5809.5809.2 7.01 7.01 7.01 4 3 3 0 644.7455 1048.5836 S918s S920s S922s Hydrogen 918 (R) sQsVsPSK (Q) S(0.99)QS(0.99)VS(0.99)PS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S SFSWAP 110466.6 1 16 485.1 296.41 HUMAN 1 19.7202 18.4895 KASALLFSSDEEDQW-p Q641Q2;S619-p KASALLFSSDEEDQW 0.286866398353762 0.216209789161595 0.263333333333333 0.146666666666667 10.2305367107806 8.7524664076411 0.263333333333333 0.146666666666667 0.0948301262879768 0.133276432521601 2.0217925606425 1.76489866696806 Q641Q2 FAM21A Q641Q2.S619.p_FAM21A Q641Q2_S619sS620s_2_2_619_620 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27456.27456.4 14.74 14.74 6.363 7 2 2 0 866.8925 3304.5919 S619s S620s TMT10 613 (K) ASALLFssDEEDQWNIPASQTHLASDSR (S) AS(0.0)ALLFS(0.99)S(0.99)DEEDQWNIPAS(0.0)QT(0.0)HLAS(0.0)DS(0.0)R s:Phosphorylated S WASHC2A 147352.2 2 70 12.1 1178.3 HUMAN 1 10.2305 8.7525 KASAPERTPSPAPKR-p Q96P11-2;T442-p KASAPERTPSPAPKR 0.893330277811656 0.0127616927756643 -0.02 -0.389666666666667 0.95645929133171 26.3978171945716 -0.02 -0.389666666666667 0.802331920617792 0.00229201935407216 -0.262920754208123 -5.39950172040599 Q96P11 NSUN5 Q96P11.2.T442.p_NSUN5 Q96P11-2_T442tS444s_2_2_442_444 Q96P11-2 Q96P11-2|Q63ZY6|Q63ZY6-6|Q3KNT7-3 Isoform 2 of Probable 28S rRNA (cytosine-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7309.7309.3 8.25 6.62 3.454 3 2 2 0 642.9881 1767.0165 T442t S444s TMT10 436 (K) ASAPERtPsPAPK (R) AS(0.0)APERT(0.99)PS(0.99)PAPK K:TMT10,t:Phosphorylated T,s:Phosphorylated S NSUN5 51151.8 6 7 2119.1 96.89 HUMAN 1 -0.9565 -26.3978 KASCLVQTPPGQYSG-p O00311;T503-p KASCLVQTPPGQYSG 0.873798109188382 0.0436607104897555 0.028 -0.407333333333333 1.14668867383261 18.2146216967827 0.028 -0.407333333333333 0.767946795699441 0.0150847400426963 0.310279521082154 -3.50292056650105 O00311 CDC7 O00311.T503.p_CDC7 O00311_T503t _1_1_503_503 O00311 O00311 Cell division cycle 7-related protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19245.19245.3 14.16 14.16 7.2 5 1 1 0 827.0765 2399.243 T503t TMT10 497 (K) ASCLVQtPPGQYSGNSFK (K) AS(0.0)CLVQT(0.99)PPGQY(0.0)S(0.0)GNS(0.0)FK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CDC7 64685.8 1 1 6079.1 14.16 HUMAN 1 1.1467 -18.2146 KASDPASSLRVAKTD-p Q96D71;S667-p KASDPASSLRVAKTD 0.609696621440558 0.395744609507139 -0.0863333333333333 0.213333333333333 3.98037251329803 5.35200229543489 -0.0863333333333333 0.213333333333333 0.399910446228675 0.291608225724474 -0.913375943590315 1.16794062936861 Q96D71 REPS1 Q96D71.S667.p_REPS1 Q96D71_S667s _1_1_667_667 Q96D71 Q96D71|Q96D71-3|Q96D71-4|Q96D71-2 RalBP1-associated Eps domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11319.11319.3 7.71 7.71 7.71 3 1 1 0 580.6533 1659.9794 S667s TMT10 661 (K) ASDPASsLRVAK (T) AS(0.0)DPAS(0.0)S(0.99)LRVAK K:TMT10,s:Phosphorylated S REPS1 86831.7 1 32 226.1 425.21 HUMAN 1 -3.9804 5.352 KASEKPVSPKSGTLK-p Q14155-5;S156-p KASEKPVSPKSGTLK 0.89934219379599 0.0751073958522965 -0.0226666666666667 -0.314666666666667 0.901369088272797 14.9221576846675 -0.0226666666666667 -0.314666666666667 0.812574316423009 0.0321946888043054 -0.248951567765643 -2.86200878919142 Q14155 ARHGEF7 Q14155.5.S156.p_ARHGEF7 Q14155-5_S156s _1_1_156_156 Q14155-5 Q14155|Q14155-3|Q14155-2|Q14155-5|B1ALK7|Q14155-1|Q14155-6|E7EU80 Isoform 5 of Rho guanine nucleotide exchange factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8355.8355.2 12.96 7.51 3.279 2 1 1 0 855.4938 1630.0143 S156s TMT10 150 (K) ASEKPVsPK (S) AS(0.0)EKPVS(0.99)PK K:TMT10,s:Phosphorylated S ARHGEF7 83311.3 7 1 434.1 313.68 HUMAN 1 -0.9014 -14.9222 KASELAETPKEEKAE-p Q9H6E5;T329-p KASELAETPKEEKAE 0.156870667579318 0.521931939926343 -0.579333333333333 0.0803333333333334 16.1377226690388 3.79504036479848 -0.579333333333333 0.0803333333333334 0.0243347973009195 0.417345719494975 -3.09467932302876 0.877599760803881 Q9H6E5 TUT1 Q9H6E5.T329.p_TUT1 Q9H6E5_T329t _1_1_329_329 Q9H6E5 F5H0R1|Q9H6E5|H3BRB1 Speckle targeted PIP5K1A-regulated poly(A) polymerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10603.10603.3 9.93 5.38 2.149 2 1 1 0 700.3798 2019.1577 T329t TMT10 323 (K) ASELAEtPKEEK (A) AS(0.0)ELAET(0.99)PKEEK K:TMT10,t:Phosphorylated T TUT1 95043.4 1 4 2113.1 97.04 HUMAN 1 -16.1377 3.795 KASELGHSLNENVLK-p Q8N6T3;S246-p KASELGHSLNENVLK 0.105022846104619 0.143662943094981 -0.583333333333333 -0.384333333333333 20.6227580267887 11.1003723338078 -0.583333333333333 -0.384333333333333 0.0086641147848352 0.0776180569465942 -4.01389400396461 -2.17271323583039 Q8N6T3 ARFGAP1 Q8N6T3.S246.p_ARFGAP1 Q8N6T3_S246s _1_1_246_246 Q8N6T3 Q8N6T3|Q8N6T3-3|Q8N6T3-4 ADP-ribosylation factor GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16527.16527.4 21.09 21.09 4.918 2 1 1 0 708.6374 2751.5608 S246s TMT10 240 (K) ASELGHsLNENVLKPAQEK (V) AS(0.0)ELGHS(0.99)LNENVLKPAQEK K:TMT10,s:Phosphorylated S ARFGAP1 45009.4 2 7 243.1 413.25 HUMAN 1 -20.6228 -11.1004 KASEPLLSPPPFGES-p O14686-3;S2277-p KASEPLLSPPPFGES 0.176075571430546 0.0326417771916463 -0.214666666666667 -0.269 14.9878916315264 20.0566650786619 -0.214666666666667 -0.269 0.0317110656583185 0.0098703713460611 -2.87618054577239 -3.88747103922768 O14686 KMT2D O14686.3.S2277.p_KMT2D O14686-3_S2277s _1_1_2277_2277 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22687.22687.2 18.28 18.28 5.586 3 1 1 0 946.9695 1812.9693 S2277s TMT10 2271 (K) ASEPLLsPPPFGESR (K) AS(0.0)EPLLS(0.99)PPPFGES(0.0)R s:Phosphorylated S KMT2D 600227.3 11 28 17.1 1042.08 HUMAN 1 -14.9879 -20.0567 KASGANYSFHKESGR-p Q9UJU6;S141-p KASGANYSFHKESGR 0.975009344981545 0.0288306253181768 0.00466666666666666 -0.338666666666667 0.212909726205477 20.8550818288045 0.00466666666666666 -0.338666666666667 0.952158014666753 0.00821281078292564 0.0628292850817486 -4.06090183438383 Q9UJU6 DBNL Q9UJU6.S141.p_DBNL Q9UJU6_S141s _1_1_141_141 Q9UJU6 Q9UJU6-2|B4DDD6|Q9UJU6-4|Q9UJU6-5 Drebrin-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10852.10852.2 13.3 13.3 4.499 3 1 1 0 810.4017 1539.832 S141s TMT10 135 (K) ASGANYsFHK (E) AS(0.0)GANY(0.0)S(0.99)FHK K:TMT10,s:Phosphorylated S DBNL 48491.7 3 2 1388.1 147.4 HUMAN 1 0.2129 -20.8551 KASGDGESLDEDSEF-p Q99733-2;S304-p KASGDGESLDEDSEF 0.421825718456346 0.0575574640579441 0.121333333333333 0.264333333333333 6.90600257088126 16.5173048035459 0.121333333333333 0.264333333333333 0.203891792010191 0.0222981852732548 1.4445492212628 3.16583203770013 Q99733 NAP1L4 Q99733.2.S304.p_NAP1L4 Q99733-2_S304s _1_1_304_304 Q99733-2 Q99733-2 Isoform 2 of Nucleosome assembly protein 1-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34307.34802.3 21.04 21.04 1.21 5 1 1 0 1096.4819 3207.4592 S304s TMT10 298 (K) ASGDGEsLDEDSEFTLASDFEIGHFFR (E) AS(0.0)GDGES(0.99)LDEDS(0.0)EFT(0.0)LAS(0.0)DFEIGHFFR s:Phosphorylated S NAP1L4 44306.2 4 8 1403.1 146.36 HUMAN 1 6.906 16.5173 KASGPPVSELITKAV-p P16402;S42-p KASGPPVSELITKAV 0.187534582157854 0.143904792670879 -0.356333333333333 0.182333333333333 14.2657116631333 11.0895100084712 -0.356333333333333 0.182333333333333 0.0374480177254968 0.0778124337747196 -2.74183539495045 2.17081030546502 P16402 HIST1H1D P16402.S42.p_HIST1H1D P16402_S42s _1_1_42_42 P16402 P16402|P10412|P16403 Histone H1.3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22535.22535.3 12.83 12.83 4.567 3 1 1 0 579.6573 1656.9936 S42s TMT10 36 (K) ASGPPVsELITK (A) AS(0.0)GPPVS(0.99)ELIT(0.0)K K:TMT10,s:Phosphorylated S HIST1H1D 22349.5 1 17 738.1 234.77 HUMAN 1 -14.2657 11.0895 KASHWSRSPPRPPRE-p P21127;S234-p KASHWSRSPPRPPRE 0.318436709095685 0.0578835778338855 0.233666666666667 0.248666666666667 9.30309007369968 16.4853148954168 0.233666666666667 0.248666666666667 0.117406189413661 0.0224630389654577 1.86084284876334 3.15962237095002 P21127 CDK11B P21127.S234.p_CDK11B P21127_S234s _1_1_234_234 P21127 P21127|J3QR44|A0A0D9SEN2|Q9UQ88|A0A0D9SER5|P21127-2|B7ZVY7|P21127-3|Q9UQ88-2|Q9UQ88-3|Q5QPR3|P21127-8|A0A0D9SEI3|Q9UQ88-4|P21127-9|J3QR29|Q5QPR4|P21127-6|P21127-10|Q9UQ88-9|E7ESP2|J3KS35 Cyclin-dependent kinase 11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4065.4065.4 9.95 9.95 99 1 1 1 0 350.9398 1320.7698 S234s TMT10 234 (R) sPPRPPRER (F) S(1.0)PPRPPRER s:Phosphorylated S CDK11B 92876.5 14 5 421.1 320.22 HUMAN 1 9.3031 16.4853 KASISVHSPQKSTKN-p O43572;S52-p KASISVHSPQKSTKN 0.800971890059254 0.0140107463579745 0.0696666666666667 -0.474333333333333 1.85493056463454 25.717054595424 0.0696666666666667 -0.474333333333333 0.65238947137233 0.00268098596504086 0.476430187482707 -5.22094600818815 O43572 AKAP10 O43572.S52.p_AKAP10 O43572_S52s _1_1_52_52 O43572 O43572|E7EMD6|J3QR74 A-kinase anchor protein 10, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8787.8892.2 9.96 9.96 9.964 3 1 1 0 796.4338 1511.8946 S52s TMT10 46 (K) ASISVHsPQK (S) AS(0.0)IS(0.0)VHS(0.99)PQK K:TMT10,s:Phosphorylated S AKAP10 74273.3 2 2 1844.1 111.39 HUMAN 1 1.8549 -25.7171 KASNRRPSVYLPTRE-p Q9BW61;S33-p KASNRRPSVYLPTRE 0.234288146531526 0.0524413303576264 -0.239 -0.517333333333333 12.0819748593073 17.0793077167706 -0.239 -0.517333333333333 0.061915946180997 0.0195915694627497 -2.34688310461491 -3.27576082371568 Q9BW61 DDA1 Q9BW61.S33.p_DDA1 Q9BW61_S33s _1_1_33_33 Q9BW61 Q9BW61 DET1- and DDB1-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18812.18812.4 14.74 13.51 2.229 6 1 1 0 704.3726 2734.4977 S33s Hydrogen 31 (R) RPsVYLPTREYPSEQIIVTEK (T) RPS(0.99)VY(0.0)LPT(0.0)REY(0.0)PS(0.0)EQIIVT(0.0)EK K:TMT10-Lys-Only,s:Phosphorylated S DDA1 11892.1 5 1 3061.1 61.74 HUMAN 1 -12.082 -17.0793 KASPKRLSLPNTAWG-p Q765P7;S639-p KASPKRLSLPNTAWG 0.352869551975262 0.053912882138571 0.181333333333333 0.256 8.40180630846779 16.9079370837738 0.181333333333333 0.259096381144352 0.144483871148326 0.0203800991071554 1.70480177870769 3.24207042632808 Q765P7 MTSS1L Q765P7.S639.p_MTSS1L Q765P7_S639s _1_1_639_639 Q765P7 Q765P7|A0A087WXN9 MTSS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22471.22471.4 29.09 29.09 1.356 5 1 1 0 980.4745 3838.8946 S639s TMT10 637 (K) RLsLPNTAWGSPSPEAAGYPGAGAEDEQQQLAANR (H) RLS(0.99)LPNT(0.0)AWGS(0.0)PS(0.0)PEAAGY(0.0)PGAGAEDEQQQLAANR s:Phosphorylated S MTSS1L 80498.5 5 10 425.1 319.48 HUMAN 1 8.4018 16.9079 KASPLRLSFDRGQLD-p Q9BXL6;S787-p KASPLRLSFDRGQLD 0.301887758255495 0.817598851402086 -0.235 0.0433333333333334 9.74827166975121 1.22345747432867 -0.235 0.0433333333333334 0.105967535258961 0.754491328237357 -1.93800794816195 0.328994389804476 Q9BXL6 CARD14 Q9BXL6.S787.p_CARD14 Q9BXL6_S787s _1_1_787_787 Q9BXL6 Q9BXL6 Caspase recruitment domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18822.18822.4 13.06 6.78 2.27 3 1 1 0 556.7929 2144.1774 S787s TMT10 781 (K) ASPLRLsFDRGQLDPSR (M) AS(0.0)PLRLS(0.99)FDRGQLDPS(0.0)R s:Phosphorylated S CARD14 114922.3 4 9 816.1 219.94 HUMAN 1 -9.7483 1.2235 KASPVAESPKVMDEK-p P78364;S669-p KASPVAESPKVMDEK 0.187254795627764 0.860120385992481 0.217333333333333 0.018 14.2875540713452 0.92221776901353 0.217333333333333 0.018 0.0372601494801953 0.808682831592748 2.74586841303574 0.254227351225259 P78364 PHC1 P78364.S669.p_PHC1 P78364_S669s _1_1_669_669 P78364 P78364|J3KQH6 Polyhomeotic-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13558.13558.3 12.08 12.08 3.824 2 1 1 0 752.4048 2175.2298 S669s TMT10 663 (K) ASPVAEsPKVMDEK (S) AS(0.0)PVAES(0.99)PKVMDEK K:TMT10,s:Phosphorylated S PHC1 106159.3 1 4 1503.1 135.84 HUMAN 1 14.2876 0.9222 KASQCNVSLKKQRSR-p O15194;S33-p KASQCNVSLKKQRSR 0.381381938406044 0.226488836174227 -0.213 -0.153 7.73799536526078 8.49366076245621 -0.213 -0.153 0.168345093612499 0.141460087948013 -1.58967422583643 -1.7201278124961 O15194 CTDSPL O15194.S33.p_CTDSPL O15194_S33s _1_1_33_33 O15194 O15194|O15194-2 CTD small phosphatase-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10760.10760.4 11.98 11.98 7.181 2 1 1 0 476.2682 1822.0824 S33s TMT10 27 (K) ASQCNVsLKK (Q) AS(0.0)QCNVS(0.99)LKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CTDSPL 31527.4 5 2 4179.1 35.98 HUMAN 1 -7.738 -8.4937 KASTTSLSGSDSETE-p Q8N1G2;S51-p KASTTSLSGSDSETE 0.800204109337566 0.00967265628027221 -0.0473333333333333 0.420666666666667 1.86467235344839 28.3792341323738 -0.0473333333333334 0.420666666666667 0.650927717192414 0.00145236771647685 -0.47861972948801 5.94500299938302 Q8N1G2 CMTR1 Q8N1G2.S51.p_CMTR1 Q8N1G2_S51sS53sS55s_3_3_51_55 Q8N1G2 Q8N1G2 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12729.12967.3 9.48 9.48 1.46 8 3 3 0 752.3123 2015.0181 S51s S53s S55s TMT10 45 (K) ASTTSLsGsDsETEGK (Q) AS(0.0)T(0.0)T(0.0)S(0.0)LS(0.99)GS(0.99)DS(0.99)ET(0.0)EGK K:TMT10,s:Phosphorylated S CMTR1 96231.9 2 5 2841.1 68.37 HUMAN 1 -1.8647 28.3792 KASWSSLSMDEKVEL-p P13073;S74-p KASWSSLSMDEKVEL 0.249157518555538 0.0255212986348768 0.389 0.415333333333333 11.5173389500557 21.6765295402486 0.389 0.415333333333333 0.0705124987434842 0.00679746603117946 2.24700465239082 4.2439462511196 P13073 COX4I1 P13073.S74.p_COX4I1 P13073_S74s _1_1_74_74 P13073 P13073|H3BNV9|H3BN72 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.22770.22770.3 9.93 9.93 1.144 5 1 1 0 813.7403 2359.2368 S74s TMT10 68 (K) ASWSSLsMDEKVELYR (I) AS(0.0)WS(0.0)S(0.0)LS(0.99)MDEKVELY(0.0)R K:TMT10,s:Phosphorylated S COX4I1 19633.4 1 2 4480.1 30.88 HUMAN 1 11.5173 21.6765 KATCFLPSPGEKALG-p Q8IZW8;S82-p KATCFLPSPGEKALG 0.529434722423025 0.050124945718593 -0.0863333333333333 -0.377 5.10981058889971 17.37198061883 -0.0863333333333334 -0.377 0.308332242185364 0.0183147897794648 -1.12414391579987 -3.33365249265324 Q8IZW8 TNS4 Q8IZW8.S82.p_TNS4 Q8IZW8_S82s _1_1_82_82 Q8IZW8 Q8IZW8 Tensin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20454.20454.3 9.6 9.6 9.598 2 1 1 0 582.2994 1664.9082 S82s TMT10 76 (K) ATCFLPsPGEK (A) AT(0.0)CFLPS(0.99)PGEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNS4 77846.5 1 1 3466.1 50.3 HUMAN 1 -5.1098 -17.372 KATENDIYNFFSPLN-p P52597;Y306-p KATENDIYNFFSPLN 0.470196127429149 0.342209990883974 0.114666666666667 0.0903333333333333 6.04843953655817 6.16889148736662 0.114666666666667 0.0903333333333333 0.248402548012669 0.2416077446147 1.29318810564576 1.31427397815793 P52597 HNRNPF P52597.Y306.p_HNRNPF P52597_Y306y _1_1_306_306 P52597 G8JLB6|P31943|E9PCY7|P52597 Heterogeneous nuclear ribonucleoprotein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31694.31694.3 24.04 24.04 9.827 3 1 1 0 769.3748 2226.1392 Y306y TMT10 300 (K) ATENDIyNFFSPLNPVR (V) AT(0.0)ENDIY(0.99)NFFS(0.0)PLNPVR y:Phosphorylated Y HNRNPF 46013.4 9 16 990.1 191.56 HUMAN 1 6.0484 6.1689 KATEVSKTPEAREAP-p Q9UNF1;T72-p KATEVSKTPEAREAP 0.189504701110918 0.00358460126670815 -0.270666666666667 -0.615 14.1350596217199 36.43206280481 -0.270666666666667 -0.615 0.0385917113530639 0.000227401706531978 -2.71774951491202 -8.63665511656476 Q9UNF1 MAGED2 Q9UNF1.T72.p_MAGED2 Q9UNF1_T72t _1_1_72_72 Q9UNF1 Q9UNF1|Q9UNF1-2|Q5H909 Melanoma-associated antigen D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6222.6222.3 11.94 8.1 1.108 3 1 1 0 576.3099 1646.9478 T72t TMT10 66 (K) ATEVSKtPEAR (E) AT(0.0)EVS(0.0)KT(0.99)PEAR K:TMT10,t:Phosphorylated T MAGED2 65124.3 6 5 893.1 204.33 HUMAN 1 -14.1351 -36.4321 KATFMVGSYGPRPEE-p P52566;S145-p KATFMVGSYGPRPEE 0.334493735589086 0.0947522360335324 -0.224666666666667 -0.225333333333333 8.87757586167094 13.5334128203794 -0.224666666666667 -0.225333333333333 0.12949184353644 0.0443260179471862 -1.78717081571581 -2.60614337671652 P52566 ARHGDIB P52566.S145.p_ARHGDIB P52566_S145s _1_1_145_145 P52566 P52566 Rho GDP-dissociation inhibitor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.29831.29831.5 18.53 14.86 3.28 5 1 1 0 697.3484 3402.7332 S145s TMT10 139 (K) ATFMVGsYGPRPEEYEFLTPVEEAPK (G) AT(0.0)FMVGS(0.99)Y(0.0)GPRPEEY(0.0)EFLT(0.0)PVEEAPK K:TMT10,s:Phosphorylated S ARHGDIB 23044.6 1 1 5525.1 18.53 HUMAN 1 -8.8776 -13.5334 KATILDLSCNKLTTL-p Q96AG4;S47-p KATILDLSCNKLTTL 0.188778224113783 0.201209241901359 -0.620666666666667 -0.279333333333333 14.1891420382133 9.16109312529175 -0.620666666666667 -0.279333333333333 0.0381141111527614 0.121308347722543 -2.72771183450198 -1.83557927643156 Q96AG4 LRRC59 Q96AG4.S47.p_LRRC59 Q96AG4_S47s _1_1_47_47 Q96AG4 Q96AG4 Leucine-rich repeat-containing protein 59 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21967.21967.3 10.12 10.12 10.123 2 1 1 0 558.2973 1592.9082 S47s TMT10 41 (K) ATILDLsCNK (L) AT(0.0)ILDLS(0.99)CNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LRRC59 35329.2 1 2 3281.1 55.16 HUMAN 1 -14.1891 -9.1611 KATLGPATPLKATSG-p Q5T0Z8;T671-p KATLGPATPLKATSG 0.440328450814009 0.0328384452835984 -0.185333333333333 -0.411333333333333 6.56530988946987 20.0132781366261 -0.185333333333333 -0.411333333333333 0.220530677180319 0.00996947265153981 -1.38468721063889 -3.87816854084181 Q5T0Z8 C6orf132 Q5T0Z8.T671.p_C6orf132 Q5T0Z8_T671t _1_1_671_671 Q5T0Z8 Q5T0Z8 Uncharacterized protein C6orf132 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16501.16501.3 10.79 10.79 10.789 2 1 1 0 502.9617 1426.9034 T671t TMT10 665 (K) ATLGPAtPLK (A) AT(0.0)LGPAT(0.99)PLK K:TMT10,t:Phosphorylated T C6orf132 124488.2 1 12 336.1 355.09 HUMAN 1 -6.5653 -20.0133 KATLWPATPPKATLG-p Q5T0Z8;T661-p KATLWPATPPKATLG 0.229081970494532 0.00568317461142871 -0.193666666666667 -0.561 12.298713472471 32.5296542136398 -0.193666666666667 -0.561 0.0589018116653979 0.000558514662044605 -2.38543284548787 -7.22751098424718 Q5T0Z8 C6orf132 Q5T0Z8.T661.p_C6orf132 Q5T0Z8_T661t _1_1_661_661 Q5T0Z8 Q5T0Z8 Uncharacterized protein C6orf132 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27456.27456.4 14.05 9.22 1.107 4 1 1 0 700.4117 2718.6525 T661t TMT10 655 (K) ATLWPAtPPKATLGPATPLK (A) AT(0.0)LWPAT(0.99)PPKAT(0.0)LGPAT(0.0)PLK K:TMT10,t:Phosphorylated T C6orf132 124488.2 5 11 336.1 355.09 HUMAN 1 -12.2987 -32.5297 KATQYGIYERCRELV-p Q8IUH5;Y70-p KATQYGIYERCRELV 0.244663424257806 0.15802410150729 0.290333333333333 -0.196 11.6979124180992 10.5403337880153 0.290333333333333 -0.196 0.0676408035439772 0.0883012031686041 2.27886445435596 -2.07487085630583 Q8IUH5 ZDHHC17 Q8IUH5.Y70.p_ZDHHC17 Q8IUH5_Y70y _1_1_70_70 Q8IUH5 Q8IUH5|Q8IUH5-3 Palmitoyltransferase ZDHHC17 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11590.11590.2 11.97 4.62 3.973 3 1 1 0 705.3386 1329.7 Y70y TMT10 64 (K) ATQYGIyER (C) AT(0.0)QY(0.0)GIY(0.99)ER y:Phosphorylated Y ZDHHC17 73779.6 1 1 296.1 11.97 HUMAN 1 11.6979 -10.5403 KATSSHFSASEESMD-p Q9ULU4-19;S487-p KATSSHFSASEESMD 0.588965373424401 0.0247309816796438 0.0878333333333333 0.328833333333333 4.23320459679358 21.8663292611326 0.0878333333333333 0.328833333333333 0.377293688576425 0.00650679424508699 0.961452565186955 4.28693115909599 Q9ULU4 ZMYND8 Q9ULU4.19.S487.p_ZMYND8 Q9ULU4-19_S487sS489s_2_2_487_489 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24390.24390.3 12.09 12.09 1.251 6 2 2 0 869.7112 2447.1801 S487s S489s TMT10 481 (K) ATSSHFsAsEESMDFLDK (S) AT(0.0)S(0.0)S(0.0)HFS(0.99)AS(0.99)EES(0.0)MDFLDK K:TMT10,s:Phosphorylated S ZMYND8 139738.7 3 24 57.1 712.18 HUMAN 2 4.2332 21.8663 KAVAGNISDPGLQKS-p P18206-2;S809-p KAVAGNISDPGLQKS 0.916145150674614 0.57996969532645 0.0156666666666667 0.0723333333333334 0.741779622619274 3.1917624476464 0.0156666666666667 0.0723333333333334 0.842989252532778 0.479538803393646 0.207790358211617 0.758988911364545 P18206 VCL P18206.2.S809.p_VCL P18206-2_S809s _1_1_809_809 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15657.15657.2 11.73 11.73 99 1 1 1 0 904.4888 1728.0056 S809s TMT10 803 (K) AVAGNIsDPGLQK (S) AVAGNIS(1.0)DPGLQK K:TMT10,s:Phosphorylated S VCL 117290.9 2 18 319.1 365.38 HUMAN 1 0.7418 3.1918 KAVAITQSPSSVRLP-p P15822;S2327-p KAVAITQSPSSVRLP 0.285681922962152 0.854916496209556 -0.263 -0.0246666666666667 10.2669580269196 0.959929835390514 -0.263 -0.0246666666666667 0.0940381761111533 0.801691015401803 -2.02813075025174 -0.263770983409962 P15822 HIVEP1 P15822.S2327.p_HIVEP1 P15822_S2327s _1_1_2327_2327 P15822 P15822|F5H212|P15822-3 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11480.11480.2 14.35 14.35 1.767 4 1 1 0 762.9016 1444.8321 S2327s TMT10 2321 (K) AVAITQsPSSVR (L) AVAIT(0.0)QS(0.99)PS(0.0)S(0.0)VR s:Phosphorylated S HIVEP1 299483.8 2 32 82.1 631.69 HUMAN 1 -10.267 -0.9599 KAVARRESAASGLGG-p Q9C0C2;S1473-p KAVARRESAASGLGG 0.225596004363036 0.509865520176487 -0.255333333333333 0.0913333333333334 12.4149678174382 3.92178478078247 -0.255333333333333 0.0913333333333334 0.0573460116046706 0.405341921508653 -2.40616205135241 0.901998287576843 Q9C0C2 TNKS1BP1 Q9C0C2.S1473.p_TNKS1BP1 Q9C0C2_S1473sS1476s_2_2_1473_1476 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27460.27460.4 18.35 18.35 99 2 2 2 0 850.6434 3239.6341 S1473s S1476s TMT10 1471 (R) REsAAsGLGGLLEEEGAGAGAAQEEVLEPGR (D) RES(1.0)AAS(1.0)GLGGLLEEEGAGAGAAQEEVLEPGR s:Phosphorylated S TNKS1BP1 182819.3 1 86 4.1 2105.7 HUMAN 1 -12.415 3.9218 KAVKEERSPKKKEAP-p Q8WYP5-2;S2031-p KAVKEERSPKKKEAP 0.973184341125227 0.0234454335466919 -0.00866666666666669 -0.362333333333333 0.230963757384056 22.2314611328183 -0.0086666666666667 -0.362333333333333 0.948208019944293 0.00598210300365259 -0.0680258046076409 -4.37037584566428 Q8WYP5 AHCTF1 Q8WYP5.2.S2031.p_AHCTF1 Q8WYP5-2_S2031s _1_1_2031_2031 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.4559.4559.3 9.91 9.91 99 1 1 1 0 604.3519 1731.0732 S2031s TMT10 2025 (K) AVKEERsPK (K) AVKEERS(1.0)PK K:TMT10,s:Phosphorylated S AHCTF1 258049.6 3 32 40.1 829.79 HUMAN 1 -0.231 -22.2315 KAVLFCLSEDKKNII-p P23528;S41-p KAVLFCLSEDKKNII 0.343568239873255 0.942481215052846 -0.202 0.00833333333333334 8.61646980614418 0.367833949782499 -0.202 0.00833333333333335 0.137515932895341 0.918790730476213 -1.74197206071965 0.106796468002958 P23528 CFL1 P23528.S41.p_CFL1 P23528_S41s _1_1_41_41 P23528 E9PK25|P23528|G3V1A4 Cofilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22776.22776.4 12.62 12.62 99 1 1 1 0 520.0394 1997.1708 S41s TMT10 35 (K) AVLFCLsEDKK (N) AVLFCLS(1.0)EDKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CFL1 18730.4 2 5 681.1 245.42 HUMAN 1 -8.6165 0.3678 KAVMDHVSDSFLETN-p P35221;S391-p KAVMDHVSDSFLETN 0.0429314820571298 0.0168445767604143 -0.622333333333333 0.574666666666667 30.4215032182549 24.4764314324222 -0.622333333333333 0.574666666666667 0.000907506361726946 0.00356744147212736 -6.56139899791821 4.90642617005213 P35221 CTNNA1 P35221.S391.p_CTNNA1 P35221_S391s _1_1_391_391 P35221 P35221-2|G3XAM7|P35221-3|A0A087WZL6 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.37260.37260.4 21.23 21.23 1.12 3 1 1 0 813.188 3169.7583 S391s TMT10 385 (K) AVMDHVsDSFLETNVPLLVLIEAAK (N) AVMDHVS(0.99)DS(0.0)FLET(0.0)NVPLLVLIEAAK K:TMT10,s:Phosphorylated S CTNNA1 100754.2 3 9 169.1 491.55 HUMAN 1 -30.4215 24.4764 KAVPLNASKQDGPMP-p Q9P0L0-2;S198-p KAVPLNASKQDGPMP 0.0419102396608924 0.876754986878946 -0.568666666666667 0.0286666666666667 30.7452264024777 0.802831655728764 -0.568666666666667 0.0286666666666667 0.000842320479203188 0.831221627216506 -6.66210387469189 0.223640822290978 Q9P0L0 VAPA Q9P0L0.2.S198.p_VAPA Q9P0L0-2_S198s _1_1_198_198 Q9P0L0-2 Q9P0L0-2 Isoform 2 of Vesicle-associated membrane protein-associated protein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13627.13627.2 10.82 6.99 99 1 1 1 0 669.3832 1257.7931 S198s TMT10 192 (K) AVPLNAsK (Q) AVPLNAS(1.0)K K:TMT10,s:Phosphorylated S VAPA 32841.2 3 5 1813.1 113.12 HUMAN 1 -30.7452 0.8028 KAVQPHISPLTINIP-p Q01167;S180-p KAVQPHISPLTINIP 0.808652261368213 0.682408708998956 0.0516666666666667 0.04 1.77154734140237 2.27099011387609 0.0516666666666667 0.04 0.665036169230781 0.592790163600321 0.45759337935342 0.567942850660657 Q01167 FOXK2 Q01167.S180.p_FOXK2 Q01167_S180s_1_1_180_180 Q01167 Q01167|Q01167-2|Q01167-3 Forkhead box protein K2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34819.34819.5 13.81 13.81 1.146 11 1 1 0 932.0756 4575.3901 S180s N185n TMT10 174 (K) AVQPHIsPLTInIPDTMAHLISPLPSPTGTISAANSCPSSPR (G) AVQPHIS(0.99)PLT(0.0)IN(0.99)IPDT(0.0)MAHLIS(0.0)PLPS(0.0)PT(0.0)GT(0.0)IS(0.0)AAN(0.0)S(0.0)CPS(0.0)S(0.0)PR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated FOXK2 69288.9 3 3 689.1 243.19 HUMAN 1 1.7715 2.271 KAVRRPSSMYSTGGK-p O75382;S455-p KAVRRPSSMYSTGGK 0.844396662154091 0.758094344825314 0.0426666666666667 0.0453333333333333 1.42177008922893 1.66076407790393 0.0426666666666667 0.0453333333333334 0.72081363144848 0.682218657143559 0.376567375645255 0.432245344959684 O75382 TRIM3 O75382.S455.p_TRIM3 O75382_S455s _1_1_455_455 O75382 O75382|O75382-2|A0A1W2PPI7|O75382-3|O75382-4 Tripartite motif-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7583.7583.3 7.07 7.07 1.108 5 1 1 0 570.2881 1628.883 S455s TMT10 452 (R) RPSsMYSTGGK (R) RPS(0.0)S(0.99)MY(0.0)S(0.0)T(0.0)GGK K:TMT10,s:Phosphorylated S TRIM3 81912.1 1 4 1265.1 160.44 HUMAN 1 1.4218 1.6608 KAVSPPPSPRASPVA-p O15417;S995-p KAVSPPPSPRASPVA 0.958736090069421 0.149414951986032 -0.008 0.174666666666667 0.355728727491831 10.8649213460893 -0.008 0.174666666666667 0.921355276304647 0.081942246338671 -0.10341893830463 2.13151373480736 O15417 TNRC18 O15417.S995.p_TNRC18 O15417_S991sS995sS999s_3_3_991_999 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20276.20490.3 9.2 9.2 99 3 3 3 0 781.7255 2103.269 S991s S995s S999s TMT10 989 (K) AVsPPPsPRAsPVAALK (A) AVS(1.0)PPPS(1.0)PRAS(1.0)PVAALK K:TMT10,s:Phosphorylated S TNRC18 316168 4 36 75.1 647.68 HUMAN 1 -0.3557 10.8649 KAVSRVGSHPEGGAS-p Q9NVT9;S260-p KAVSRVGSHPEGGAS 0.0565104968730532 0.0192104793400816 -0.52 -0.339 27.2178725471843 23.5919587936828 -0.52 -0.339 0.0018976352769871 0.00437324814533794 -5.62832960852998 -4.6903478955515 Q9NVT9 ARMC1 Q9NVT9.S260.p_ARMC1 Q9NVT9_S260s _1_1_260_260 Q9NVT9 Q9NVT9|Q9NVT9-2 Armadillo repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30104.30104.3 22.75 22.75 5.797 5 1 1 0 818.3982 2373.2149 S260s TMT10 258 (R) VGsHPEGGASWLSTAANFLSR (S) VGS(0.99)HPEGGAS(0.0)WLS(0.0)T(0.0)AANFLS(0.0)R s:Phosphorylated S ARMC1 31508.3 1 4 1358.1 150.21 HUMAN 1 -27.2179 -23.592 KAVTIANSPSKPSEK-p Q8NEF9;S203-p KAVTIANSPSKPSEK 0.131504655206906 0.00195162346428314 -0.506333333333333 -0.8 18.2138390585228 42.3823373464822 -0.506333333333334 -0.8 0.0150874586953664 5.77785003338257e-05 -3.50567215903681 -11.2565934023378 Q8NEF9 SRFBP1 Q8NEF9.S203.p_SRFBP1 Q8NEF9_S203s _1_1_203_203 Q8NEF9 Q8NEF9 Serum response factor-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12284.12284.4 16.58 16.58 3.069 4 1 1 0 549.8117 2116.2581 S203s TMT10 197 (K) AVTIANsPSKPSEK (D) AVT(0.0)IANS(0.99)PS(0.0)KPS(0.0)EK K:TMT10,s:Phosphorylated S SRFBP1 48747.1 12 1 1171.1 170.26 HUMAN 1 -18.2138 -42.3823 KAYEPKLTPEEMMDS-p Q6KC79;T1189-p KAYEPKLTPEEMMDS 0.209850580534842 0.111882851301244 -0.282 0.181 13.0875070530821 12.5555020434866 -0.282 0.181 0.0491189749084766 0.0555200432359245 -2.52684724825896 2.42999161750971 Q6KC79 NIPBL Q6KC79.T1189.p_NIPBL Q6KC79_T1189t _1_1_1189_1189 Q6KC79 Q6KC79|Q6KC79-2 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23921.23921.3 15.77 15.77 4.463 5 1 1 0 957.8107 2791.4501 T1189t TMT10 1183 (K) AYEPKLtPEEMMDSSTFK (R) AY(0.0)EPKLT(0.99)PEEMMDS(0.0)S(0.0)T(0.0)FK K:TMT10,t:Phosphorylated T NIPBL 318099.5 3 22 50.1 752.87 HUMAN 1 -13.0875 12.5555 KAYHEQLSVAEITNA-p P68363;S287-p KAYHEQLSVAEITNA 0.602377813619717 0.261042922645266 0.0993333333333333 0.120666666666667 4.06482277272162 7.68650019415739 0.0993333333333333 0.120666666666667 0.392209151312006 0.170353076282842 0.929500419092211 1.58024448907439 P68363 TUBA1B P68363.S287.p_TUBA1B P68363_S287s _1_1_287_287 P68363 Q71U36|P68363|Q13748|Q6PEY2|P68366|P68366-2|Q13748-2|Q71U36-2|P68363-2 Tubulin alpha-1B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24358.24358.4 21.91 21.91 4.413 3 1 1 0 822.8983 3208.6171 S287s TMT10 281 (K) AYHEQLsVAEITNACFEPANQMVK (C) AY(0.0)HEQLS(0.99)VAEIT(0.0)NACFEPANQMVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TUBA1B 50835.4 2 11 868.1 210.03 HUMAN 1 4.0648 7.6865 KAYNLNRTPSTVTLN-p Q9ULH0-4;T1660-p KAYNLNRTPSTVTLN 0.458016049996369 0.0266169244131195 0.232 -0.439666666666667 6.25158665841116 21.3761602159397 0.232 -0.439666666666667 0.237050750243627 0.00728423550462664 1.32926047883129 -4.17645642980002 Q9ULH0 KIDINS220 Q9ULH0.4.T1660.p_KIDINS220 Q9ULH0-4_T1660t _1_1_1660_1660 Q9ULH0-4 Q9ULH0|Q9ULH0-4|Q9ULH0-2|Q9ULH0-5 Isoform 4 of Kinase D-interacting substrate of 220 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12549.12549.3 11.25 6.36 1.33 6 1 1 0 899.7805 2617.3644 T1660t TMT10 1654 (K) AYNLNRtPSTVTLNNNSAPANR (A) AY(0.0)NLNRT(0.99)PS(0.0)T(0.0)VT(0.0)LNNNS(0.0)APANR t:Phosphorylated T KIDINS220 196163.1 1 19 306.1 373.6 HUMAN 1 6.2516 -21.3762 KAYRRRRSLSPLGGR-p Q14004-2;S315-p KAYRRRRSLSPLGGR 0.233628206047255 0.206239833834715 0.238333333333333 0.2105 12.1227300995625 9.02082334666665 0.238333333333333 0.2105 0.0613376298026675 0.125290362372775 2.35412255332329 1.81131440717983 Q14004 CDK13 Q14004.2.S315.p_CDK13 Q14004-2_S315sS317s_2_2_315_317 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8978.8978.3 13.56 13.56 13.562 4 2 2 0 613.9303 1679.846 S315s S317s Hydrogen 315 (R) sLsPLGGRDDSPVSHR (A) S(0.99)LS(0.99)PLGGRDDS(0.0)PVS(0.0)HR s:Phosphorylated S CDK13 159173.6 3 18 145.1 520.12 HUMAN 2 12.1227 9.0208 KCALTGQSKSCKHRI-p Q96QF0;S401-p KCALTGQSKSCKHRI 0.618666303773003 0.0684465700412352 0.155333333333333 -0.206333333333333 3.87526809949715 15.4943520167875 0.155333333333333 -0.206333333333333 0.409706816933561 0.0282205061192823 0.893210656388443 -2.96967508309095 Q96QF0 RAB3IP Q96QF0.S401.p_RAB3IP Q96QF0_S401s _1_1_401_401 Q96QF0 Q96QF0|Q96QF0-2|Q96QF0-8|F8VTR6 Rab-3A-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9242.9242.2 10.06 10.06 2.198 2 1 1 0 701.8627 1322.7502 S401s TMT10 395 (K) CALTGQsK (S) CALT(0.0)GQS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RAB3IP 53704.9 1 5 1620.1 126.94 HUMAN 1 3.8753 -15.4944 KCGTQTSSPQVLNSS-p H7BY22;S204-p KCGTQTSSPQVLNSS 0.434135403741661 0.0572217874961637 -0.143 0.231333333333333 6.67617749934163 16.5553271314559 -0.143 0.231333333333333 0.214972174788855 0.0221038175346203 -1.40420202493696 3.1732192376439 H7BY22 ZBTB44 H7BY22.S204.p_ZBTB44 H7BY22_S204s _1_1_204_204 H7BY22 Q8NCP5|H7BY22|Q8NCP5-2 Zinc finger and BTB domain-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10602.10602.3 11.48 11.48 1.153 9 1 1 0 861.3843 2502.1728 S204s TMT10 198 (K) CGTQTSsPQVLNSSASYSENR (N) CGT(0.0)QT(0.0)S(0.0)S(0.99)PQVLNS(0.0)S(0.0)AS(0.0)Y(0.0)S(0.0)ENR C:Carbamidomethylation,s:Phosphorylated S ZBTB44 64850.4 1 4 3799.1 42.87 HUMAN 1 -6.6762 16.5553 KCHIAVGSPGRIKQL-p Q9UHI6;S187-p KCHIAVGSPGRIKQL 0.424703032265256 0.716034790224238 0.152333333333333 -0.0606666666666666 6.85456104225974 1.9946571245374 0.152333333333333 -0.0606666666666667 0.206321219337585 0.631734052717709 1.43553010113322 -0.507559624991023 Q9UHI6 DDX20 Q9UHI6.S187.p_DDX20 Q9UHI6_S187s _1_1_187_187 Q9UHI6 Q9UHI6 Probable ATP-dependent RNA helicase DDX20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6064.6064.2 11.67 11.67 99 1 1 1 0 681.8317 1282.6888 S187s TMT10 181 (K) CHIAVGsPGR (I) CHIAVGS(1.0)PGR C:Carbamidomethylation,s:Phosphorylated S DDX20 93037.6 2 2 610.1 261.86 HUMAN 1 6.8546 -1.9947 KCKKVHDSLEDFPKN-p P23771-2;S382-p KCKKVHDSLEDFPKN 0.921583751108816 0.0504260799938781 -0.0146666666666667 -0.334333333333333 0.696178281814972 17.3379526829808 -0.0146666666666667 -0.334333333333333 0.85188735496391 0.0184588538693309 -0.19582973637919 -3.32689841773489 P23771 GATA3 P23771.2.S382.p_GATA3 P23771-2_S382s _1_1_382_382 P23771-2 P23771-2 Isoform 2 of Trans-acting T-cell-specific transcription factor GATA-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15960.15960.3 18.18 18.18 99 1 1 1 0 575.6281 1644.8997 S382s TMT10 379 (K) VHDsLEDFPK (N) VHDS(1.0)LEDFPK K:TMT10,s:Phosphorylated S GATA3 48728.8 2 5 2536.1 79.45 HUMAN 1 -0.6962 -17.338 KCPELDCSFTAHEKI-p Q9UHK0;S205-p KCPELDCSFTAHEKI 0.0973600331101722 0.00337059573491952 -0.475666666666667 -0.785666666666667 21.4321084501618 36.986050573992 -0.475666666666667 -0.785666666666667 0.00719099778505974 0.000200168134909074 -4.1932610572605 -8.85492792362653 Q9UHK0 NUFIP1 Q9UHK0.S205.p_NUFIP1 Q9UHK0_S205s _1_1_205_205 Q9UHK0 Q9UHK0 Nuclear fragile X mental retardation-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14265.14265.3 14.59 14.59 2.317 2 1 1 0 711.3262 2051.9931 S205s TMT10 199 (K) CPELDCsFTAHEK (I) CPELDCS(0.99)FT(0.0)AHEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NUFIP1 56698 1 1 3749.1 43.95 HUMAN 1 -21.4321 -36.9861 KCPFGALSIVNLPSN-p P61221;S71-p KCPFGALSIVNLPSN 0.546236180544102 0.713682271944549 0.0906666666666667 0.0953333333333334 4.84856741702503 2.01674078462865 0.0906666666666667 0.0953333333333333 0.3274486907384 0.628529869694559 1.07623282485125 0.512446542481275 P61221 ABCE1 P61221.S71.p_ABCE1 P61221_S71s _1_1_71_71 P61221 P61221|D6R9I9 ATP-binding cassette sub-family E member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33668.33668.3 13.4 8.18 4.784 2 1 1 0 799.7611 2317.299 S71s TMT10 65 (K) CPFGALsIVNLPSNLEK (E) CPFGALS(0.99)IVNLPS(0.0)NLEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ABCE1 68283 1 2 4358.1 32.8 HUMAN 1 4.8486 2.0167 KCPKCDKTVYFAEKV-p P52943;T11-p KCPKCDKTVYFAEKV 0.637168892797154 0.023461555047809 -0.0876666666666667 0.372333333333333 3.65094414776255 22.2277675716651 -0.0876666666666667 0.372333333333333 0.43142527561565 0.00598719279009384 -0.849790104417591 4.36952673772808 P52943 CRIP2 P52943.T11.p_CRIP2 P52943_T11t _1_1_11_11 P52943 P52943 Cysteine-rich protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15790.15790.3 12.57 12.57 3.416 2 1 1 0 676.689 1948.0817 T11t TMT10 8 (K) CDKtVYFAEK (V) CDKT(0.99)VY(0.0)FAEK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CRIP2 23291.1 1 1 1870.1 109.93 HUMAN 1 -3.6509 22.2278 KCQEQAVSPKVDDQC-p Q5T7V8;S360-p KCQEQAVSPKVDDQC 0.8930597643092 0.0365527397235171 -0.0283333333333333 -0.284333333333333 0.961500524198459 19.3370040138201 -0.0283333333333334 -0.284333333333333 0.80140112467558 0.0116492938034331 -0.26419316209501 -3.73473898862252 Q5T7V8 GORAB Q5T7V8.S360.p_GORAB Q5T7V8_S360s _1_1_360_360 Q5T7V8 Q5T7V8|Q5T7V8-4|Q5T7V8-3 RAB6-interacting golgin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28357.28357.4 13 13 5.756 7 1 1 0 1236.8162 4864.2864 S360s TMT10 354 (K) CQEQAVsPKVDDQCGNSSSIPFLSPNCPNQEGNDISAALAT (-) CQEQAVS(0.99)PKVDDQCGNS(0.0)S(0.0)S(0.0)IPFLS(0.0)PNCPNQEGNDIS(0.0)AALAT(0.0) C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GORAB 45334.6 2 3 4324.1 33.54 HUMAN 1 -0.9615 -19.337 KCQRLFRSPSMPCSV-p P30305;S321-p KCQRLFRSPSMPCSV 0.686670412534458 0.00504553803227928 0.058 -0.645666666666667 3.06397322901496 33.4763620366364 0.058 -0.645666666666667 0.493858663875065 0.000449121448875868 0.733376296919975 -7.54979454936037 P30305 CDC25B P30305.S321.p_CDC25B P30305_S321s _1_1_321_321 P30305 P30305-4|P30305-2|P30305-3|B4DIG0|G8JLH2 M-phase inducer phosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25159.25159.4 17.78 13.75 3.03 3 1 1 0 635.6092 2459.4395 S321s TMT10 318 (R) LFRsPSMPCSVIRPILK (R) LFRS(0.99)PS(0.0)MPCS(0.0)VIRPILK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CDC25B 65671 6 10 563.1 271.52 HUMAN 1 3.064 -33.4764 KCRLQFLTLKEEIEH-p P59817;T462-p KCRLQFLTLKEEIEH 0.699466572297815 0.0494506066251788 -0.0573333333333333 -0.346333333333333 2.91770577082001 17.4654591882363 -0.0573333333333333 -0.346333333333333 0.510774753547534 0.0179247901995633 -0.703647268220768 -3.3522385239026 P59817 ZNF280A P59817.T462.p_ZNF280A P59817_T462t _1_1_462_462 P59817 P59817|A0A0G2JN84 Zinc finger protein 280A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18267.18267.5 7.46 1.16 4.54 2 1 1 0 748.61 3659.0969 T462t Hydrogen 448 (R) RRVLQCSKCRLQFLtLKEEIEHK (T) RRVLQCS(0.0)KCRLQFLT(0.99)LKEEIEHK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T ZNF280A 61899.1 1 1 5423.1 19.48 HUMAN 1 -2.9177 -17.4655 KCRTVLASPQKIEGF-p P17707;S298-p KCRTVLASPQKIEGF 0.107848656931516 0.000952253650599092 -0.452333333333333 -1.38733333333333 20.3749428277576 55.540396664469 -0.452333333333333 -1.38733333333333 0.00917288010852274 2.79228879486177e-06 -3.95988318917726 -19.9255595702384 P17707 AMD1 P17707.S298.p_AMD1 P17707_S298s _1_1_298_298 P17707 P17707|Q5VXN5 S-adenosylmethionine decarboxylase proenzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21294.21294.3 10.4 10.4 10.403 2 1 1 0 729.0919 2105.2937 S298s TMT10 294 (R) TVLAsPQKIEGFK (R) T(0.0)VLAS(0.99)PQKIEGFK K:TMT10,s:Phosphorylated S AMD1 38738.3 1 1 6639.1 10.4 HUMAN 1 -20.3749 -55.5404 KCSAIFRSDSLGTQG-p Q6ZRV2;S1096-p KCSAIFRSDSLGTQG 0.312808396386622 0.188390843014669 0.199333333333333 -0.136333333333333 9.44298325884709 9.53449700654654 0.199333333333333 -0.136333333333333 0.113684609439113 0.111314130771819 1.88507768404038 -1.90020884641098 Q6ZRV2 FAM83H Q6ZRV2.S1096.p_FAM83H Q6ZRV2_S1096s _1_1_1096_1096 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13193.13193.3 9.11 9.11 9.109 4 1 1 0 655.3112 1883.9595 S1096s TMT10 1090 (K) CSAIFRsDSLGTQGR (L) CS(0.0)AIFRS(0.99)DS(0.0)LGT(0.0)QGR C:Carbamidomethylation,s:Phosphorylated S FAM83H 127633.5 1 34 7.1 1347.23 HUMAN 1 9.443 -9.5345 KCSGHNNSDSEEKDK-p Q86X95;S305-p KCSGHNNSDSEEKDK 0.0247428091988012 0.168705425732885 0.798 0.219333333333333 37.2029634526497 10.1660107094112 0.798 0.219333333333333 0.000190416095093171 0.0962495990563906 8.96054259347664 2.00973954838617 Q86X95 CIR1 Q86X95.S305.p_CIR1 Q86X95_S305s _1_1_305_305 Q86X95 Q86X95 Corepressor interacting with RBPJ 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4239.4239.4 9.6 9.6 2.862 3 1 1 0 594.2795 2294.1286 S305s TMT10 299 (K) CSGHNNsDSEEKDK (S) CS(0.0)GHNNS(0.99)DS(0.0)EEKDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CIR1 52597.6 1 2 2295.1 89.34 HUMAN 1 37.203 10.166 KCSGPGLSPGMVRAN-p P21333-2;S1459-p KCSGPGLSPGMVRAN 0.350553974320356 0.468039514350753 0.151333333333333 0.079 8.45562966614658 4.39522065850039 0.151333333333333 0.079 0.14270429139381 0.363477836314226 1.71412319449006 0.99178145473014 P21333 FLNA P21333.2.S1459.p_FLNA P21333-2_S1459s _1_1_1459_1459 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54|A0A087WWY3 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13859.14061.2 15.76 15.76 5.163 2 1 1 0 763.8563 1446.7395 S1459s TMT10 1453 (K) CSGPGLsPGMVR (A) CS(0.0)GPGLS(0.99)PGMVR C:Carbamidomethylation,s:Phosphorylated S FLNA 282751.6 9 9 198.1 454.47 HUMAN 1 8.4556 4.3952 KCSVIRDSLLQDGEF-p P07737;S77-p KCSVIRDSLLQDGEF 0.943309913754527 0.913652543237028 -0.012 0.014 0.498992593357929 0.549911101307096 -0.012 0.014 0.891457700203023 0.88106690798154 -0.143008772325088 0.15681185255485 P07737 PFN1 P07737.S77.p_PFN1 P07737_S77s _1_1_77_77 P07737 P07737|K7EJ44 Profilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26126.26126.3 13.47 8.04 1.693 3 1 1 0 850.7345 2470.2268 S77s TMT10 71 (K) CSVIRDsLLQDGEFSMDLR (T) CS(0.0)VIRDS(0.99)LLQDGEFS(0.0)MDLR C:Carbamidomethylation,s:Phosphorylated S PFN1 15225.1 3 4 1550.1 132.52 HUMAN 1 -0.499 0.5499 KCSVLPLSQNQEFMP-p P41250;S622-p KCSVLPLSQNQEFMP 0.553101092841527 0.820926557626536 0.0793333333333333 -0.028 4.74704728493968 1.19902387648985 0.0793333333333333 -0.028 0.335193255498668 0.758748092651702 1.05749248473263 -0.323049714317604 P41250 GARS P41250.S622.p_GARS P41250_S622s _1_1_622_622 P41250 P41250 Glycine--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33234.33234.3 7.57 4.38 2.815 2 1 1 0 854.7673 2482.3238 S622s TMT10 616 (K) CSVLPLsQNQEFMPFVK (E) CS(0.0)VLPLS(0.99)QNQEFMPFVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GARS 83905.8 1 4 2422.1 84.16 HUMAN 1 4.747 -1.199 KCSYSQGSVKRQALY-p Q8N806;S52-p KCSYSQGSVKRQALY 0.806595725807555 0.99428806303828 -0.0456666666666667 -0.000999999999999992 1.79711865882302 0.0346485606525988 -0.0456666666666667 -0.000999999999999973 0.661131932712934 0.992053614854666 -0.463388537433887 -0.010426868525839 Q8N806 UBR7 Q8N806.S52.p_UBR7 Q8N806_S52s _1_1_52_52 Q8N806 Q8N806 Putative E3 ubiquitin-protein ligase UBR7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5004.5004.3 11.6 11.6 2.124 4 1 1 0 570.6194 1629.8783 S52s TMT10 46 (K) CSYSQGsVKR (Q) CS(0.0)Y(0.0)S(0.0)QGS(0.99)VKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UBR7 49367.3 2 2 1053.1 182.86 HUMAN 1 -1.7971 -0.0346 KCVTIPRSLDGRLQV-p Q99717;S71-p KCVTIPRSLDGRLQV 0.539507901385774 0.183498524131644 -0.0863333333333333 -0.165333333333333 4.95102240921364 9.68467443699063 -0.0863333333333333 -0.165333333333333 0.319814211949172 0.107530720632795 -1.09507500153063 -1.92622446070618 Q99717 SMAD5 Q99717.S71.p_SMAD5 Q99717_S71s _1_1_71_71 Q99717 Q99717|Q15796-2|B7Z5N5|O15198-2 Mothers against decapentaplegic homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13738.13738.3 8.53 4.7 3.546 2 1 1 0 528.2685 1502.8311 S71s TMT10 65 (K) CVTIPRsLDGR (L) CVT(0.0)IPRS(0.99)LDGR C:Carbamidomethylation,s:Phosphorylated S SMAD5 52942 1 7 2883.1 67.13 HUMAN 1 -4.951 -9.6847 KCYWGKESPDMTKNF-p Q01085;S278-p KCYWGKESPDMTKNF 0.563172875202441 0.0178084805641451 -0.0866666666666667 0.483 4.59212077543989 24.0945347422259 -0.0866666666666667 0.483 0.347366491724608 0.00389535036186054 -1.02875196493134 4.81232072913686 Q01085 TIAL1 Q01085.S278.p_TIAL1 Q01085_S278s _1_1_278_278 Q01085 Q01085-2 Nucleolysin TIAR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16020.16020.3 14.25 14.25 2.173 3 1 1 0 757.0373 2189.1338 S278s TMT10 272 (K) CYWGKEsPDMTK (N) CY(0.0)WGKES(0.99)PDMT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TIAL1 41932.3 1 7 2599.1 77.13 HUMAN 1 -4.5921 24.0945 KDANAKLSELEAALQ-p P05787;S354-p KDANAKLSELEAALQ 0.0358550101273995 0.0145535069518938 -0.705 0.718333333333333 33.6684757805877 25.4411671830015 -0.705 0.718333333333333 0.00042968720525512 0.0028568226581968 -7.63071610387238 5.14980970805092 P05787 KRT8 P05787.S354.p_KRT8 P05787_S354s _1_1_354_354 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31625.31625.2 11.69 3.34 99 1 1 1 0 719.8804 1358.7841 S354s TMT10 353 (K) LsELEAALQR (A) LS(1.0)ELEAALQR s:Phosphorylated S KRT8 53703.3 2 27 69.1 672.47 HUMAN 1 -33.6685 25.4412 KDAPSLRSSPGPAPR-p Q9H330-2;S15-p KDAPSLRSSPGPAPR 0.17928329733391 0.00528796617855052 0.227333333333333 -0.767 14.7394107134881 33.0836385986575 0.227333333333333 -0.767 0.0335783172977667 0.000491627468595525 2.82971881994942 -7.41465814709048 Q9H330 TMEM245 Q9H330.2.S15.p_TMEM245 Q9H330-2_S15s _1_1_15_15 Q9H330-2 Q9H330|Q9H330-2|Q9H330-4 Isoform 2 of Transmembrane protein 245 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9587.9587.3 11.38 8.31 1.101 3 1 1 0 781.052 2261.1836 S15s Acetyl 2 (M) ADGGGPKDAPSLRsSPGPAPR (V) ADGGGPKDAPS(0.0)LRS(0.99)S(0.0)PGPAPR K:TMT10-Lys-Only,s:Phosphorylated S TMEM245 97868.8 4 1 2319.1 87.95 HUMAN 1 14.7394 -33.0836 KDDGLEKSPMKKKQK-p O14647;S1386-p KDDGLEKSPMKKKQK 0.161991144248337 0.750894768835539 -0.494666666666667 -0.125 15.826656225213 1.71991576078312 -0.494666666666667 -0.125 0.0261417331701532 0.672989710002171 -3.0349767659805 -0.445792260016688 O14647 CHD2 O14647.S1386.p_CHD2 O14647_S1386s _1_1_1386_1386 O14647 O14647 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11759.11759.3 8.39 8.39 99 1 1 1 0 629.6682 1807.0238 S1386s TMT10 1380 (K) DDGLEKsPMK (K) DDGLEKS(1.0)PMK K:TMT10,s:Phosphorylated S CHD2 212309.6 1 6 482.1 298.11 HUMAN 1 -15.8267 -1.7199 KDDQEWESPSPPKPT-p P51397;S49-p KDDQEWESPSPPKPT 0.264646088491939 0.394102625178339 -0.350333333333333 0.094 10.9502504750168 5.37570422709806 -0.350333333333333 0.094 0.0803479780953192 0.290021087894984 -2.1473958929099 1.17223167374146 P51397 DAP P51397.S49.p_DAP P51397_S49s _1_1_49_49 P51397 P51397 Death-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26178.26178.5 22.96 22.96 1.126 4 1 1 0 713.9778 3485.8883 S49s TMT10 41 (K) DKDDQEWEsPSPPKPTVFISGVIAR (G) DKDDQEWES(0.99)PS(0.0)PPKPT(0.0)VFIS(0.0)GVIAR K:TMT10,s:Phosphorylated S DAP 11164.4 2 2 2099.1 97.65 HUMAN 1 -10.9503 5.3757 KDDSRALTLGALTLP-p Q9BSJ8-2;T563-p KDDSRALTLGALTLP 0.3626106053244 0.0214937545520178 0.669666666666667 1.17733333333333 8.18591385130807 22.8028255658916 0.669666666666667 1.17733333333333 0.151847838709251 0.0052446612600823 1.66739717754202 4.50298217927999 Q9BSJ8 ESYT1 Q9BSJ8.2.T563.p_ESYT1 Q9BSJ8-2_T563t _1_1_563_563 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.35231.35231.3 11.67 11.67 5.262 2 1 1 0 540.32 1538.9831 T563t TMT10 561 (R) ALtLGALTLPLAR (L) ALT(0.99)LGALT(0.0)LPLAR t:Phosphorylated T ESYT1 124514 1 5 400.1 328.2 HUMAN 1 8.1859 22.8028 KDEEEDMSLD_____-p Q16186;S405-p KDEEEDMSLD_____ 0.113798805771488 0.0372913750599624 -0.362666666666667 -0.32 19.6794318248281 19.1976956295403 -0.362666666666667 -0.32 0.0107660605373796 0.0120290252648786 -3.81048824066149 -3.70555221921668 Q16186 ADRM1 Q16186.S405.p_ADRM1 Q16186_S405s _1_1_405_405 Q16186 Q16186|A0A087WX59 Proteasomal ubiquitin receptor ADRM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11432.11432.3 13.96 13.96 99 1 1 1 0 741.0236 2141.0887 S405s TMT10 396 (K) DKKDEEEDMsLD (-) DKKDEEEDMS(1.0)LD K:TMT10,s:Phosphorylated S ADRM1 42437.8 4 3 3503.1 49.61 HUMAN 1 -19.6794 -19.1977 KDEKITGTPRKAHSK-p Q7Z6E9;T1087-p KDEKITGTPRKAHSK 0.336940767668124 0.0109013032380509 -0.154 -0.53 8.80375552482267 27.4930698171006 -0.154 -0.53 0.131711727992418 0.00178111933549411 -1.77439266573047 -5.69613994340887 Q7Z6E9 RBBP6 Q7Z6E9.T1087.p_RBBP6 Q7Z6E9_T1087t _1_1_1087_1087 Q7Z6E9 Q7Z6E9|Q7Z6E9-2 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7865.7865.3 7.73 2.74 2.083 2 1 1 0 437.5914 1230.7934 T1087t TMT10 1084 (K) ITGtPRK (A) IT(0.0)GT(0.99)PRK K:TMT10,t:Phosphorylated T RBBP6 202473.6 1 15 27.1 935.6 HUMAN 1 -8.8038 -27.4931 KDEKKEESEESDDDM-p P05387;S102-p KDEKKEESEESDDDM 0.97076436181379 0.021975877984731 0.00733333333333334 0.736 0.254464359834436 22.6595353075727 0.00733333333333334 0.736 0.943090921071802 0.00542058887266649 0.0747609979465709 4.46948980831385 P05387 RPLP2 P05387.S102.p_RPLP2 P05387_S102s _1_1_102_102 P05387 P05387|P05386|P05386-2 60S acidic ribosomal protein P2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28776.29407.3 13.16 13.16 1.114 2 1 1 0 830.0252 2408.0852 S102s TMT10 99 (K) KEEsEESDDDMGFGLFD (-) KEES(0.99)EES(0.0)DDDMGFGLFD K:TMT10,s:Phosphorylated S RPLP2 11664.7 23 9 1134.1 173.84 HUMAN 1 0.2545 22.6595 KDELAELSEAESEGD-p Q3L8U1;S1468-p KDELAELSEAESEGD 0.297330507583042 0.575592774769726 -0.196333333333333 -0.0633333333333333 9.91392418298688 3.23430381937755 -0.196333333333333 -0.0633333333333333 0.102001740340478 0.474864406323213 -1.96675994931982 -0.767500554772509 Q3L8U1 CHD9 Q3L8U1.S1468.p_CHD9 Q3L8U1_S1468sS1472s_2_2_1468_1472 Q3L8U1 Q3L8U1|Q3L8U1-3|Q3L8U1-2 Chromodomain-helicase-DNA-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18450.18450.5 14.82 14.82 10.743 5 2 2 0 814.6122 3909.0899 S1468s S1472s TMT10 1453 (K) QTRPFSATKDELAELsEAEsEGDEKPK (L) QT(0.0)RPFS(0.0)AT(0.0)KDELAELS(0.99)EAES(0.99)EGDEKPK K:TMT10,s:Phosphorylated S CHD9 328184.1 3 8 1062.1 182 HUMAN 1 -9.9139 -3.2343 KDELKTSSAVSTPSK-p Q9P2N5;S884-p KDELKTSSAVSTPSK 0.361546095644314 0.00286199361397657 0.25 -0.719 8.21164247986419 38.4669913175664 0.25 -0.719 0.150950915743382 0.000142331448196013 1.67185630943394 -9.46276515807009 Q9P2N5 RBM27 Q9P2N5.S884.p_RBM27 Q9P2N5_S884s _1_1_884_884 Q9P2N5 Q9P2N5|U3KPZ7 RNA-binding protein 27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7855.7855.2 11.2 11.2 1.367 6 1 1 0 751.8971 1422.8204 S884s TMT10 882 (K) TSsAVSTPSK (V) T(0.0)S(0.0)S(0.99)AVS(0.0)T(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S RBM27 119172.2 2 6 1221.1 164.77 HUMAN 1 8.2116 -38.467 KDELSDWSLAGEDDR-p P51114-2;S423-p KDELSDWSLAGEDDR 0.565542338330758 0.0403455591727108 0.103333333333333 0.300333333333333 4.56159426557563 18.6951651356112 0.103333333333333 0.300333333333333 0.349816728107935 0.0135046547694197 1.02306797879505 3.60125251257858 P51114 FXR1 P51114.2.S423.p_FXR1 P51114-2_S423s _1_1_423_423 P51114-2 P51114|B4DXZ6|P51114-2|P51114-3 Isoform 2 of Fragile X mental retardation syndrome-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15695.15695.5 25.29 20.65 3.33 13 1 1 0 1069.8907 5265.4481 S423s TMT10 391 (R) RGPNYTSGYGTNSELSNPSETESERKDELSDWsLAGEDDRDSR (H) RGPNY(0.0)T(0.0)S(0.0)GY(0.0)GT(0.0)NS(0.0)ELS(0.0)NPS(0.0)ET(0.0)ES(0.0)ERKDELS(0.0)DWS(0.99)LAGEDDRDS(0.0)R K:TMT10,s:Phosphorylated S FXR1 61190.3 1 10 553.2 273.48 HUMAN 1 4.5616 18.6952 KDENKLSSANGHEER-p Q14498;S24-p KDENKLSSANGHEER 0.110073096853557 0.817214425097826 0.478666666666667 -0.0266666666666666 20.0505728966364 1.22731937783345 0.478666666666667 -0.0266666666666666 0.00988422698942975 0.753820705493084 3.88981226960041 -0.329932157108983 Q14498 RBM39 Q14498.S24.p_RBM39 Q14498_S24s _1_1_24_24 Q14498 Q14498|Q14498-2|Q14498-3|G3XAC6|A8MYG5|F2Z2Z5|F8WF24 RNA-binding protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25523.25523.5 12.26 13.7 1.284 3 1 1 0 840.4164 4118.0955 S24s Acetyl 2 (M) ADDIDIEAMLEAPYKKDENKLSsANGHEER (S) ADDIDIEAMLEAPY(0.0)KKDENKLS(0.0)S(0.99)ANGHEER K:TMT10,s:Phosphorylated S RBM39 59663.8 4 1 915.1 200.83 HUMAN 1 20.0506 -1.2273 KDEPPPLSPAPLTPA-p Q7Z6Z7;S3919-p KDEPPPLSPAPLTPA 0.403159221089301 0.860936606844637 0.120833333333333 -0.0216666666666666 7.28302560392029 0.916945187878788 0.120833333333333 -0.0216666666666666 0.186937934414072 0.809665214593828 1.51047004712703 -0.252888617754704 Q7Z6Z7 HUWE1 Q7Z6Z7.S3919.p_HUWE1 Q7Z6Z7_S3919sT3924t_2_2_3919_3924 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29275.29275.4 19.82 19.82 4.075 7 2 2 0 1041.0219 4001.1424 S3919s T3924t TMT10 3905 (R) ESQLAHIKDEPPPLsPAPLtPATPSSLDPFFSR (E) ES(0.0)QLAHIKDEPPPLS(0.99)PAPLT(0.99)PAT(0.0)PS(0.0)S(0.0)LDPFFS(0.0)R K:TMT10,s:Phosphorylated S,t:Phosphorylated T HUWE1 485818.9 3 76 11.1 1210.45 HUMAN 2 7.283 -0.9169 KDEVKAASPGRCLPK-p Q5T8P6-3;S768-p KDEVKAASPGRCLPK 0.449498610484079 0.27668745075939 0.214666666666667 0.212333333333333 6.41488196148223 7.35305368551427 0.214666666666667 0.212333333333333 0.22830309751867 0.183947814136304 1.35815025920142 1.522240735048 Q5T8P6 RBM26 Q5T8P6.3.S768.p_RBM26 Q5T8P6-3_S768s _1_1_768_768 Q5T8P6-3 A0A087X0H9|Q5T8P6|Q5T8P6-2|Q5T8P6-3|Q5T8P6-4 Isoform 3 of RNA-binding protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9021.9021.3 11.34 11.34 99 1 1 1 0 532.2895 1514.8877 S768s TMT10 766 (K) AAsPGRCLPK (S) AAS(1.0)PGRCLPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RBM26 111063.2 3 5 2123.1 96.71 HUMAN 1 6.4149 7.3531 KDFIGDRSIPKLVAI-p Q9UHB7;S70-p KDFIGDRSIPKLVAI 0.125743941781331 0.522399652994379 -0.541 0.0936666666666667 18.7078828988857 3.78956838918538 -0.541 0.0936666666666667 0.0134651659473629 0.417871893553829 -3.60697105004135 0.876542653538608 Q9UHB7 AFF4 Q9UHB7.S70.p_AFF4 Q9UHB7_S70s _1_1_70_70 Q9UHB7 Q9UHB7|Q9UHB7-2|Q9UHB7-3 AF4/FMR2 family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16244.16244.3 11.23 4.65 99 1 1 1 0 562.6406 1605.9365 S70s TMT10 64 (K) DFIGDRsIPK (L) DFIGDRS(1.0)IPK K:TMT10,s:Phosphorylated S AFF4 127856.3 1 3 137.1 525.98 HUMAN 1 -18.7079 3.7896 KDFLAGVTQELIKTL-p P43351;T318-p KDFLAGVTQELIKTL 0.930920423214409 0.53885111272621 -0.015 -0.0586666666666666 0.617629769774781 3.61286129882111 -0.015 -0.0586666666666666 0.867435162934649 0.43522503623914 -0.175008346272378 -0.842231624279918 P43351 RAD52 P43351.T318.p_RAD52 P43351_T318t _1_1_318_318 P43351 P43351 DNA repair protein RAD52 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30876.30876.3 13.79 15.98 99 1 1 1 0 624.6808 1792.0621 T318t TMT10 312 (K) DFLAGVtQELIK (T) DFLAGVT(1.0)QELIK K:TMT10,t:Phosphorylated T RAD52 46624.3 2 2 5065.1 23.38 HUMAN 1 -0.6176 -3.6129 KDGAPRRSLNLEDYK-p Q92541;S697-p KDGAPRRSLNLEDYK 0.474773316010134 0.00479967872381982 -0.116666666666667 -0.578666666666667 5.95796474506063 33.8769413770829 -0.116666666666667 -0.578666666666667 0.253631695834061 0.000409548992873655 -1.27707171846465 -7.6897871912398 Q92541 RTF1 Q92541.S697.p_RTF1 Q92541_S697s _1_1_697_697 Q92541 Q92541 RNA polymerase-associated protein RTF1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18643.18643.3 10.96 10.96 4.779 2 1 1 0 626.3504 1797.0725 S697s TMT10 697 (R) sLNLEDYKK (R) S(0.99)LNLEDY(0.0)KK K:TMT10,s:Phosphorylated S RTF1 80540.3 7 4 1718.1 119.59 HUMAN 1 -5.958 -33.8769 KDGEKRNSLPQIPML-p Q14289;S375-p KDGEKRNSLPQIPML 0.456329906764675 0.595641919853136 0.108 0.0533333333333333 6.28396536942453 3.04677019712619 0.108 0.0533333333333333 0.235289996385164 0.495818789000892 1.33499605068371 0.729792597629702 Q14289 PTK2B Q14289.S375.p_PTK2B Q14289_S375s _1_1_375_375 Q14289 Q14289|Q14289-2 Protein-tyrosine kinase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25405.25616.3 17.57 17.57 99 1 1 1 0 687.7009 1981.1214 S375s TMT10 373 (K) RNsLPQIPMLNLEAR (R) RNS(1.0)LPQIPMLNLEAR s:Phosphorylated S PTK2B 117184.8 9 12 979.2 192.68 HUMAN 1 6.284 3.0468 KDGGRRDSASYRDRS-p A0A1W2PQ51;S601-p KDGGRRDSASYRDRS 0.663377338382 0.818366314322344 -0.084 -0.058 3.33600450914636 1.2176767361286 -0.084 -0.058 0.463873485130173 0.755496273278645 -0.787870062430129 -0.327589750296536 A0A1W2PQ51 NotFound A0A1W2PQ51.S601.p_NotFound A0A1W2PQ51_S601s _1_1_601_601 A0A1W2PQ51 A0A1W2PQ51|Q92841|A0A1X7SBZ2|Q92841-2|Q92841-3|Q92841-1 Probable ATP-dependent RNA helicase DDX17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3559.3559.3 7.41 3.98 1.414 3 1 1 0 478.8947 1354.7025 S601s TMT10 599 (R) RDsASYRDR (S) RDS(0.99)AS(0.0)Y(0.0)RDR s:Phosphorylated S DDX17 81140.9 4 4 2075.2 99 HUMAN 1 -3.336 -1.2177 KDGNGYISAAELRHV-p E7EMB3;S149-p KDGNGYISAAELRHV 0.145152146047681 0.028695375651406 0.686666666666667 -0.503 17.0954810472484 20.8831236222007 0.686666666666667 -0.503 0.0195187452225377 0.00815995263332044 3.28146433000273 -4.06707193524834 E7EMB3 NotFound E7EMB3.S149.p_NotFound E7EMB3_S149s _1_1_149_149 E7EMB3 E7EMB3|E7ETZ0|P0DP24|Q96HY3 Calmodulin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20970.20970.3 15.83 15.83 10.513 2 1 1 0 765.059 2213.1967 S149s TMT10 139 (R) VFDKDGNGYIsAAELR (H) VFDKDGNGY(0.0)IS(0.99)AAELR K:TMT10,s:Phosphorylated S CALM2 21860.1 4 4 2687.1 73.97 HUMAN 1 17.0955 -20.8831 KDGRRRKSASDSGCD-p Q7LBC6;S289-p KDGRRRKSASDSGCD 0.0291289577020664 0.0638253686352282 -0.680666666666667 -0.283333333333333 35.8866236282683 15.910800593939 -0.680666666666667 -0.283333333333333 0.000257832486657865 0.0256401133395421 -8.44332485013092 -3.04894223481398 Q7LBC6 KDM3B Q7LBC6.S289.p_KDM3B Q7LBC6_S289s _1_1_289_289 Q7LBC6 Q7LBC6 Lysine-specific demethylase 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6757.6757.2 14.84 10.45 2.102 4 1 1 0 860.3865 1639.7998 S289s TMT10 289 (K) sASDSGCDPASK (K) S(0.99)AS(0.0)DS(0.0)GCDPAS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KDM3B 193289 4 2 305.1 374.1 HUMAN 1 -35.8866 -15.9108 KDGTKRKSLSDSESD-p Q13185;S93-p KDGTKRKSLSDSESD 0.766667060694937 0.00298268443677266 0.0646666666666667 -0.689 2.2112526469962 37.9587547192911 0.0646666666666667 -0.689 0.601000364365509 0.000160001674601522 0.555093348353313 -9.25007858819993 Q13185 CBX3 Q13185.S93.p_CBX3 Q13185_S93s _1_1_93_93 Q13185 Q13185 Chromobox protein homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8826.8826.2 14.19 14.19 2.257 5 1 1 0 854.3904 1627.8063 S93s TMT10 93 (K) sLSDSESDDSK (S) S(0.99)LS(0.0)DS(0.0)ES(0.0)DDS(0.0)K K:TMT10,s:Phosphorylated S CBX3 20982.2 14 9 1104.2 177.13 HUMAN 1 2.2113 -37.9588 KDHNIPESPKPVKHQ-p P35580-5;S213-p KDHNIPESPKPVKHQ 0.841817275292433 0.265546739575654 -0.0576666666666666 0.202333333333333 1.44708907205226 7.58377651719149 -0.0576666666666667 0.202333333333333 0.716623577643666 0.174430468910988 -0.382548933621025 1.56239349627661 P35580 MYH10 P35580.5.S213.p_MYH10 P35580-5_S213s _1_1_213_213 P35580-5 P35580-5 Isoform 5 of Myosin-10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9100.9100.4 8.35 8.35 99 1 1 1 0 532.8002 2048.2107 S213s TMT10 207 (K) DHNIPEsPKPVK (H) DHNIPES(1.0)PKPVK K:TMT10,s:Phosphorylated S MYH10 230996.1 2 46 296.3 379.15 HUMAN 1 -1.4471 7.5838 KDIIRQPSEEEIIKL-p Q15121-2;S137-p KDIIRQPSEEEIIKL 0.613352365905399 0.749729769862736 0.0763333333333333 -0.0483333333333333 3.93763596238523 1.7288778137196 0.0763333333333333 -0.0483333333333333 0.403865173022929 0.671602367817861 0.905189762466969 -0.447836742031423 Q15121 PEA15 Q15121.2.S137.p_PEA15 Q15121-2_S137s _1_1_137_137 Q15121-2 Q15121-2 Isoform 2 of Astrocytic phosphoprotein PEA-15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22666.22666.5 19.13 14.38 15.455 2 1 1 0 693.0055 3381.0327 S137s TMT10 129 (K) YKDIIRQPsEEEIIKLAPPPK (K) Y(0.0)KDIIRQPS(0.99)EEEIIKLAPPPK K:TMT10,s:Phosphorylated S PEA15 17420.4 40 4 1203.1 166.92 HUMAN 1 3.9376 -1.7289 KDIKFDDSDTEQIAE-p Q9Y2I7;S475-p KDIKFDDSDTEQIAE 0.174758848872742 0.0930146168428679 -0.324666666666667 0.210333333333333 15.0914508284951 13.6420909072898 -0.324666666666667 0.210333333333333 0.030963847307762 0.043230564771782 -2.89562051534343 2.62591085800642 Q9Y2I7 PIKFYVE Q9Y2I7.S475.p_PIKFYVE Q9Y2I7_S475s _1_1_475_475 Q9Y2I7 Q9Y2I7|Q9Y2I7-4|Q9Y2I7-3|Q9Y2I7-2 1-phosphatidylinositol 3-phosphate 5-kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21596.21596.4 14.86 15.23 1.126 5 1 1 0 945.4536 3698.8124 S475s TMT10 469 (K) DIKFDDsDTEQIAEEGDDNLANSASPSK (R) DIKFDDS(0.99)DT(0.0)EQIAEEGDDNLANS(0.0)AS(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S PIKFYVE 239756.4 1 6 1398.1 146.55 HUMAN 1 -15.0915 13.6421 KDIQRFFSGYGRLLE-p Q13247;S23-p KDIQRFFSGYGRLLE 0.149214344489706 0.0237793860503462 -0.363333333333333 0.491333333333333 16.6578596807368 22.1424989581588 -0.363333333333333 0.491333333333333 0.0215880806533642 0.00610590586086129 -3.19554774974823 4.34995306129412 Q13247 SRSF6 Q13247.S23.p_SRSF6 Q13247_S23s _1_1_23_23 Q13247 Q13247 Serine/arginine-rich splicing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19066.19066.2 10.62 10.62 8.619 2 1 1 0 571.7657 1062.557 S23s TMT10 21 (R) FFsGYGR (L) FFS(0.99)GY(0.0)GR s:Phosphorylated S SRSF6 39700.2 1 14 743.1 233.79 HUMAN 1 -16.6579 22.1425 KDIQRPDSEHGLSPD-p P25054;S2088-p KDIQRPDSEHGLSPD 0.204437813280498 0.0263681512688514 -0.262666666666667 -0.297666666666667 13.3439035402459 21.441446785675 -0.262666666666667 -0.297666666666667 0.0463030549969103 0.00717555208901824 -2.57322512135758 -4.19107022276324 P25054 APC P25054.S2088.p_APC P25054_S2088sS2093sS2096s_3_3_2088_2096 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22049.22049.4 10 10 99 3 3 3 0 793.3399 2930.4321 S2088s S2093s S2096s TMT10 2082 (K) DIQRPDsEHGLsPDsENFDWK (A) DIQRPDS(1.0)EHGLS(1.0)PDS(1.0)ENFDWK K:TMT10,s:Phosphorylated S APC 313808.5 1 72 33.1 890.71 HUMAN 1 -13.3439 -21.4414 KDKDDELSFMEGAII-p Q8IZP0-9;S439-p KDKDDELSFMEGAII 0.688287844973563 0.0360899860624053 -0.0726666666666667 0.293666666666667 3.04551632882673 19.4167907540431 -0.0726666666666667 0.293666666666667 0.495961959416778 0.0114372318392449 -0.729642111146329 3.75150968360068 Q8IZP0 ABI1 Q8IZP0.9.S439.p_ABI1 Q8IZP0-9_S439s _1_1_439_439 Q8IZP0-9 Q8IZP0|Q8IZP0-12|Q8IZP0-9|Q8IZP0-6|Q8IZP0-5|A0A0A0MRT6|Q8IZP0-3|Q8IZP0-4|Q8IZP0-2|Q8IZP0-7|Q8IZP0-8|B6VEX4|Q8IZP0-10|Q8IZP0-11 Isoform 9 of Abl interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36734.36734.4 8.43 8.43 8.425 2 1 1 0 714.1303 2773.5301 S439s TMT10 433 (K) DKDDELsFMEGAIIYVIK (K) DKDDELS(0.99)FMEGAIIY(0.0)VIK K:TMT10,s:Phosphorylated S ABI1 52580.9 1 10 1517.1 134.48 HUMAN 1 -3.0455 19.4168 KDKDEKYSPKNCKLR-p Q4LE39;S656-p KDKDEKYSPKNCKLR 0.564703045643943 0.0123552213509833 0.0856666666666667 -0.748 4.57166366634793 26.6346981481501 0.0856666666666667 -0.748 0.349006594748224 0.00217035204638148 1.02494366749335 -5.46266369575658 Q4LE39 ARID4B Q4LE39.S656.p_ARID4B Q4LE39_S656s _1_1_656_656 Q4LE39 Q4LE39|Q4LE39-2|Q4LE39-3|Q4LE39-4 AT-rich interactive domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7473.7473.4 11.03 5.94 8.352 2 1 1 0 648.8724 2512.4995 S656s TMT10 648 (K) EKDKDEKYsPK (N) EKDKDEKY(0.0)S(0.99)PK K:TMT10,s:Phosphorylated S ARID4B 148890.9 8 5 191.1 463.89 HUMAN 1 4.5717 -26.6347 KDKDQPPSPSPPPQS-p Q7L1V2;S59-p KDKDQPPSPSPPPQS 0.161132785458414 0.0281529198809136 0.395333333333333 0.360666666666667 15.8804576563626 21.0107286560204 0.395333333333333 0.360666666666667 0.0258198808827326 0.00792368376356149 3.04527040142189 4.09521823107596 Q7L1V2 MON1B Q7L1V2.S59.p_MON1B Q7L1V2_S59s _1_1_59_59 Q7L1V2 Q7L1V2 Vacuolar fusion protein MON1 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10428.10428.3 8.29 8.29 1.218 7 1 1 0 949.4742 2766.431 S59s TMT10 53 (K) DKDQPPsPSPPPQSEALSSTSR (L) DKDQPPS(0.99)PS(0.0)PPPQS(0.0)EALS(0.0)S(0.0)T(0.0)S(0.0)R K:TMT10,s:Phosphorylated S MON1B 59672.6 4 1 3036.1 62.53 HUMAN 1 15.8805 21.0107 KDKDVTLSPVKAGPA-p Q8NFC6;S1531-p KDKDVTLSPVKAGPA 0.207427487300816 0.393303246156492 -0.522 -0.087 13.1814639093541 5.38722463647183 -0.522 -0.087 0.0480677295596806 0.289252776481648 -2.543817749984 -1.17431625553574 Q8NFC6 BOD1L1 Q8NFC6.S1531.p_BOD1L1 Q8NFC6_S1531s _1_1_1531_1531 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15298.15298.5 16.77 16.77 3.125 7 1 1 0 612.7477 2979.7384 S1531s TMT10 1515 (K) TSVATSTEGKDKDVTLsPVK (A) T(0.0)S(0.0)VAT(0.0)S(0.0)T(0.0)EGKDKDVT(0.0)LS(0.99)PVK K:TMT10,s:Phosphorylated S BOD1L1 332628.7 13 15 97.1 603.4 HUMAN 1 -13.1815 -5.3872 KDKEMEKSFEVVRHK-p Q9UKY7;S216-p KDKEMEKSFEVVRHK 0.103158959778694 0.00996216492251271 0.978666666666667 -0.981 20.8208676683264 28.1254007086006 0.978666666666667 -0.981 0.00827776767313229 0.00153978444888311 4.05737419965933 -5.87288504368097 Q9UKY7 CDV3 Q9UKY7.S216.p_CDV3 Q9UKY7_S216s _1_1_216_216 Q9UKY7 Q9UKY7|D6R9V8 Protein CDV3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13618.13618.4 8.6 8.6 99 1 1 1 0 566.8047 2184.2302 S216s TMT10 210 (K) DKEMEKsFEVVR (H) DKEMEKS(1.0)FEVVR K:TMT10,s:Phosphorylated S CDV3 27334.4 2 10 802.1 222.73 HUMAN 1 20.8209 -28.1254 KDKGKAESGKEEDKK-p Q99442;S117-p KDKGKAESGKEEDKK 0.769640662643281 0.180624739981569 -0.0756666666666667 0.192 2.17871821721217 9.77662601988152 -0.0756666666666667 0.192 0.605519562271261 0.105277944753317 -0.548026533661437 1.94216189504228 Q99442 SEC62 Q99442.S117.p_SEC62 Q99442_S117s _1_1_117_117 Q99442 Q99442 Translocation protein SEC62 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5149.5149.3 7.74 7.74 99 1 1 1 0 725.4011 2094.2213 S117s TMT10 113 (K) GKAEsGKEEDK (K) GKAES(1.0)GKEEDK K:TMT10,s:Phosphorylated S SEC62 46203.3 1 1 1276.1 159.11 HUMAN 1 -2.1787 9.7766 KDKGKPESEGEAKEG-p Q96EI5-2;S210-p KDKGKPESEGEAKEG 0.934107641830152 0.0125117764686051 0.0406666666666667 0.569666666666667 0.583069928137682 26.5441944287244 0.0406666666666666 0.569666666666667 0.874365487806644 0.00221605511345952 0.165756706182061 5.43846801750847 Q96EI5 TCEAL4 Q96EI5.2.S210.p_TCEAL4 Q96EI5-2_S210s _1_1_210_210 Q96EI5-2 Q96EI5-2 Isoform 2 of Transcription elongation factor A protein-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5790.5790.2 9.88 9.88 99 1 1 1 0 899.9807 1718.9892 S210s TMT10 206 (K) GKPEsEGEAK (E) GKPES(1.0)EGEAK K:TMT10,s:Phosphorylated S TCEAL4 40919.8 3 2 3257.1 55.73 HUMAN 1 0.5831 26.5442 KDKKRKRSRSTTPAP-p Q9UQ35;S248-p KDKKRKRSRSTTPAP 0.120014369208718 0.882524257906594 0.297333333333333 0.0176666666666667 19.145226523304 0.762178833661623 0.297333333333333 0.0176666666666667 0.0121752348648099 0.839038939276547 3.69786058691527 0.213091002594487 Q9UQ35 SRRM2 Q9UQ35.S248.p_SRRM2 Q9UQ35_S248sS250s_2_2_248_250 Q9UQ35 Q9UQ35|Q9UQ35-2|Q9UQ35-3|A0A087X1W1 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4886.4886.2 7.09 7.09 1.13 4 2 2 0 667.3109 1173.6789 S248s S250s Hydrogen 248 (R) sRsTTPAPK (S) S(0.99)RS(0.99)T(0.0)T(0.0)PAPK K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 2 170 2.1 3310.34 HUMAN 1 19.1452 0.7622 KDKKTNKSMYECKKS-p Q5T2T1;S336-p KDKKTNKSMYECKKS 0.0846108990025632 0.021307082498701 0.379 -0.427666666666667 22.953028118733 22.8579017555135 0.379 -0.427666666666667 0.00506637332159988 0.00517856968235737 4.54333201388953 -4.51589823707393 Q5T2T1 MPP7 Q5T2T1.S336.p_MPP7 Q5T2T1_S336s _1_1_336_336 Q5T2T1 Q5T2T1|S4R337|Q5T2T1-2 MAGUK p55 subfamily member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9816.9816.3 9.07 9.07 9.066 3 1 1 0 643.3258 1847.9963 S336s TMT10 333 (K) TNKsMYECK (K) T(0.0)NKS(0.99)MY(0.0)ECK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MPP7 65693.7 1 2 1298.1 156.56 HUMAN 1 22.953 -22.8579 KDLDEEGSEKELHEN-p O43719;S579-p KDLDEEGSEKELHEN 0.0826738945932668 0.0107208128372524 -0.792 0.820333333333333 23.1389450476057 27.6212421482287 -0.792 0.820333333333334 0.00485406396767225 0.00172932167619086 -4.58735094775228 5.73163459584617 O43719 HTATSF1 O43719.S579.p_HTATSF1 O43719_S579s _1_1_579_579 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15965.16172.4 15.44 15.44 99 1 1 1 0 717.363 2786.4663 S579s TMT10 573 (K) DLDEEGsEKELHENVLDK (E) DLDEEGS(1.0)EKELHENVLDK K:TMT10,s:Phosphorylated S HTATSF1 86421.8 7 10 149.1 512 HUMAN 1 -23.1389 27.6212 KDLELALSPIHNSSA-p Q96GX5;S370-p KDLELALSPIHNSSA 0.670171441411796 0.0237926524415323 0.0886666666666667 -0.411333333333333 3.25493726174734 22.1379655989477 0.0886666666666667 -0.411333333333333 0.472613664233832 0.00611228280500974 0.77173389932053 -4.34891394721603 Q96GX5 MASTL Q96GX5.S370.p_MASTL Q96GX5_S370s _1_1_370_370 Q96GX5 Q96GX5|Q96GX5-3|Q96GX5-2 Serine/threonine-protein kinase greatwall HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23603.23603.3 16.2 16.2 6.978 5 1 1 0 801.0838 2321.2662 S370s TMT10 364 (K) DLELALsPIHNSSALPTTGR (S) DLELALS(0.99)PIHNS(0.0)S(0.0)ALPT(0.0)T(0.0)GR s:Phosphorylated S MASTL 98458.4 1 1 659.1 251.91 HUMAN 1 3.2549 -22.138 KDLFDLNSSEEDDTE-p Q9Y3T9;S672-p KDLFDLNSSEEDDTE 0.463367602126208 0.0200409310766479 0.125333333333333 0.316666666666667 6.16455967382161 23.2807805173677 0.125333333333333 0.316666666666667 0.241848853326994 0.00469809666464512 1.31382601724032 4.61586763295129 Q9Y3T9 NOC2L Q9Y3T9.S672.p_NOC2L Q9Y3T9_S672s _1_1_672_672 Q9Y3T9 Q9Y3T9 Nucleolar complex protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26134.26134.2 18.81 17.31 1.104 4 1 1 0 1257.5248 2434.0731 S672s TMT10 666 (K) DLFDLNsSEEDDTEGFSER (G) DLFDLNS(0.99)S(0.0)EEDDT(0.0)EGFS(0.0)ER s:Phosphorylated S NOC2L 85773.7 6 5 1605.1 128.26 HUMAN 1 6.1646 23.2808 KDLGRSESLRVVCRP-p E9PC47;S353-p KDLGRSESLRVVCRP 0.9021887421451 0.295281116775173 -0.071 -0.192 0.878535796391936 6.99272657060931 -0.071 -0.192 0.816857724714349 0.199860671822856 -0.243126613628562 -1.45933721650448 E9PC47 NotFound E9PC47.S353.p_NotFound E9PC47_S353s _1_1_353_353 E9PC47 E9PC47|P53667|P53667-2|P53667-4 LIM domain kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5082.5082.4 8.77 8.77 1.135 2 1 1 0 451.9858 1724.954 S353s TMT10 351 (R) SEsLRVVCRPHR (I) S(0.0)ES(0.99)LRVVCRPHR C:Carbamidomethylation,s:Phosphorylated S LIMK1 77009.3 1 5 2794.1 70.37 HUMAN 1 -0.8785 -6.9927 KDLIHDVSFDFHGRR-p Q96EE3-1;S19-p KDLIHDVSFDFHGRR 0.790303444703601 0.937962863103377 0.105666666666667 0.0103333333333333 1.97213766637588 0.394270042510293 0.105666666666667 0.0103333333333333 0.635018288832662 0.913214914574202 0.502622847888296 0.114165668172658 Q96EE3 SEH1L Q96EE3.1.S19.p_SEH1L Q96EE3-1_S19s _1_1_19_19 Q96EE3-1 Q96EE3-1 Isoform B of Nucleoporin SEH1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16874.16874.4 13.11 5.54 99 1 1 1 0 506.4988 1943.0085 S19s TMT10 13 (K) DLIHDVsFDFHGRR (M) DLIHDVS(1.0)FDFHGRR s:Phosphorylated S SEH1L 47148.1 1 1 4335.1 33.31 HUMAN 1 1.9721 0.3943 KDLLPRLTPILKNRH-p O75533;T1021-p KDLLPRLTPILKNRH 0.391518643244044 0.075844989681455 -0.215333333333333 0.264666666666667 7.50810233721433 14.8667555169453 -0.215333333333333 0.264666666666667 0.177496488770966 0.032608021472091 -1.54969290115763 2.85165763388785 O75533 SF3B1 O75533.T1021.p_SF3B1 O75533_T1021t _1_1_1021_1021 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29068.29068.3 10.07 7.64 99 1 1 1 0 606.3743 1737.1402 T1021t TMT10 1015 (K) DLLPRLtPILK (N) DLLPRLT(1.0)PILK K:TMT10,t:Phosphorylated T SF3B1 146569.5 1 32 53.1 735.77 HUMAN 1 -7.5081 14.8668 KDLVDVASGVEEDEL-p Q9P260-2;S326-p KDLVDVASGVEEDEL 0.118673427068097 0.387124581631683 -0.303666666666667 0.110666666666667 19.2514080815629 5.47890782256093 -0.303666666666667 0.110666666666667 0.0118811695042377 0.283210413271603 -3.72010436527478 1.1908809670097 Q9P260 KIAA1468 Q9P260.2.S326.p_KIAA1468 Q9P260-2_S326s_1_1_326_326 Q9P260-2 Q9P260-2|A0A075B785 Isoform 2 of LisH domain and HEAT repeat-containing protein KIAA1468 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.37175.37175.4 23.36 23.36 3.215 6 1 1 0 1261.1475 4960.6005 S326s N342n TMT10 320 (K) DLVDVAsGVEEDELEALTPIISnLPPTLETPQPAENSMLVQK (L) DLVDVAS(0.99)GVEEDELEALT(0.0)PIIS(0.0)N(0.99)LPPT(0.0)LET(0.0)PQPAEN(0.0)S(0.0)MLVQK K:TMT10,s:Phosphorylated S,n:Deamidated KIAA1468 139711.8 2 8 724.1 236.86 HUMAN 1 -19.2514 5.4789 KDLVPDNSKTADNAT-p Q9Y224;S107-p KDLVPDNSKTADNAT 0.513314534436529 0.255670999258198 0.095 -0.130666666666667 5.3511464941979 7.80088082109415 0.095 -0.130666666666667 0.291665694396255 0.165925034987396 1.16803595747224 -1.60010473686489 Q9Y224 C14orf166 Q9Y224.S107.p_C14orf166 Q9Y224_Y99yS107sT114t_3_3_99_114 Q9Y224 Q9Y224|G3V4C6 RNA transcription, translation and transport factor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13629.13629.5 8.08 3.45 1.124 4 3 3 0 608.497 2796.5913 Y99y N106n S107s N112n T114t TMT10 99 (K) yKDLVPDnsKTADnAtK (N) Y(0.99)KDLVPDN(1.0)S(0.99)KT(0.0)ADN(1.0)AT(0.99)K K:TMT10,y:Phosphorylated Y,n:Deamidated,s:Phosphorylated S,t:Phosphorylated T RTRAF 28181.7 1 2 5345.1 20.24 HUMAN 1 5.3511 -7.8009 KDLYCHKSD______-p P16220;S340-p KDLYCHKSD______ 0.645352058762717 0.433644321574605 -0.0966666666666667 0.120666666666667 3.55828979514772 4.83506783927431 -0.0966666666666667 0.120666666666667 0.440728383425463 0.328468113403778 -0.831694916977662 1.07353398982648 P16220 CREB1 P16220.S340.p_CREB1 P16220_S340s _1_1_340_340 P16220 P16220|P16220-2|P16220-3 Cyclic AMP-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7966.7966.3 12.63 12.63 7.396 2 1 1 0 525.9157 1495.7615 S340s TMT10 334 (K) DLYCHKsD (-) DLY(0.0)CHKS(0.99)D C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CREB1 36915.7 4 4 2816.1 69.58 HUMAN 1 -3.5583 4.8351 KDLYSNKSV______-p P18846;S270-p KDLYSNKSV______ 0.160078188700121 0.827345712328291 0.271 -0.029 15.920615849954 1.15250461554775 0.271 -0.029 0.0255822309314462 0.766919072637245 3.05296249067312 -0.311675581809164 P18846 ATF1 P18846.S270.p_ATF1 P18846_S270s _1_1_270_270 P18846 P18846|P18846-2 Cyclic AMP-dependent transcription factor ATF-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13944.13944.3 8.38 8.38 2.687 3 1 1 0 488.5893 1383.7884 S270s TMT10 264 (K) DLYSNKsV (-) DLY(0.0)S(0.0)NKS(0.99)V K:TMT10,s:Phosphorylated S ATF1 29346.1 2 4 4005.1 39.26 HUMAN 1 15.9206 -1.1525 KDMLQHISLLVKQVQ-p O75052;S350-p KDMLQHISLLVKQVQ 0.12069597861379 0.285899610038395 -0.301666666666667 0.110666666666667 19.0858720211789 7.17453552912575 -0.301666666666667 0.110666666666667 0.0123427745935069 0.191666603608494 -3.68545692853487 1.4911091725987 O75052 NOS1AP O75052.S350.p_NOS1AP O75052_S350s _1_1_350_350 O75052 O75052|O75052-3|O75052-2 Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27008.27008.3 15.57 15.57 99 1 1 1 0 612.347 1755.0603 S350s TMT10 344 (K) DMLQHIsLLVK (Q) DMLQHIS(1.0)LLVK K:TMT10,s:Phosphorylated S NOS1AP 56491.1 1 5 1378.1 148.59 HUMAN 1 -19.0859 7.1745 KDMSLKDSGSDLSHR-p O95251;S162-p KDMSLKDSGSDLSHR 0.373737854391693 0.411944189200086 -0.183666666666667 0.106 7.91841695420942 5.12333021015909 -0.183666666666667 0.106 0.161494711354369 0.307373893945617 -1.62100487484793 1.12637926827196 O95251 KAT7 O95251.S162.p_KAT7 O95251_S162s_1_1_162_162 O95251 O95251|O95251-4 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7427.7427.5 14.8 14.8 2.405 4 1 1 0 512.0673 2460.3484 M157m S162s TMT10 156 (K) DmSLKDsGSDLSHRPK (R) DM(1.0)S(0.0)LKDS(0.99)GS(0.0)DLS(0.0)HRPK K:TMT10,m:Oxidized methionine,s:Phosphorylated S KAT7 71325.8 4 9 691.1 243.06 HUMAN 1 -7.9184 5.1233 KDNADLLSPLKKWKS-p E7EWN3;S848-p KDNADLLSPLKKWKS 0.80484369889076 0.00129606731851265 -0.0406666666666667 -0.990666666666667 1.81782121857516 47.116019370312 -0.0406666666666667 -0.990666666666667 0.657987855863297 1.94266565837528e-05 -0.468068287152326 -13.8467013196251 E7EWN3 SETD5 E7EWN3.S848.p_SETD5 E7EWN3_S848s _1_1_848_848 E7EWN3 E7EWN3|Q9C0A6|Q9C0A6-3|Q9C0A6-2 SET domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20530.20530.3 10.88 7.34 99 1 1 1 0 661.0502 1901.1675 S848s TMT10 842 (K) DNADLLsPLKK (W) DNADLLS(1.0)PLKK K:TMT10,s:Phosphorylated S SETD5 161030.5 2 8 773.1 227.48 HUMAN 1 -1.8178 -47.116 KDNDDDQSDKGTYTI-p Q5SW79;S497-p KDNDDDQSDKGTYTI 0.934377786071211 0.0132636674348151 -0.0126666666666667 0.368666666666667 0.579611087381114 26.1195540503351 -0.0126666666666667 0.368666666666667 0.875062133917864 0.00244368146607835 -0.164827657874703 5.32599030034074 Q5SW79 CEP170 Q5SW79.S497.p_CEP170 Q5SW79_S497s_1_1_497_497 Q5SW79 Q5SW79 Centrosomal protein of 170 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15620.15620.4 9.95 8.21 1.1 9 1 1 0 1218.0641 4788.2811 N492n S497s TMT10 481 (K) NQATSATSEKDnDDDQsDKGTYTIELENPNSEEVEAR (K) N(0.0)QAT(0.0)S(0.0)AT(0.0)S(0.0)EKDN(0.99)DDDQS(0.99)DKGT(0.0)Y(0.0)T(0.0)IELEN(0.0)PN(0.0)S(0.0)EEVEAR K:TMT10,n:Deamidated,s:Phosphorylated S CEP170 175689.3 2 11 128.1 537.52 HUMAN 1 -0.5796 26.1196 KDNEHKRSLTKTPAR-p Q9BXS6;S296-p KDNEHKRSLTKTPAR 0.638521709488803 0.247071686174731 0.125333333333333 -0.357666666666667 3.63502620041178 8.00053717931757 0.125333333333333 -0.357666666666667 0.433009455441341 0.158469716897289 0.846688277441509 -1.63473561340707 Q9BXS6 NUSAP1 Q9BXS6.S296.p_NUSAP1 Q9BXS6_S296s _1_1_296_296 Q9BXS6 Q9BXS6|Q9BXS6-2|Q9BXS6-5|Q9BXS6-3|Q9BXS6-6 Nucleolar and spindle-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.4245.4245.4 9.84 9.84 9.837 2 1 1 0 499.5305 1915.1328 S296s TMT10 290 (K) DNEHKRsLTK (T) DNEHKRS(0.99)LT(0.0)K K:TMT10,s:Phosphorylated S NUSAP1 49622.1 1 7 1571.1 130.66 HUMAN 1 3.635 -8.0005 KDNFFSLTPKDKETI-p Q562F6;T845-p KDNFFSLTPKDKETI 0.127652091791245 0.0684921539518208 -0.424 -0.313333333333333 18.5243896792772 15.4906504482011 -0.424 -0.313333333333333 0.0140462706411272 0.0282445692083979 -3.56918008218336 -2.96897402138383 Q562F6 SGOL2 Q562F6.T845.p_SGOL2 Q562F6_T845t _1_1_845_845 Q562F6 Q562F6|Q562F6-2 Shugoshin 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26087.26087.2 13.5 9.21 2.235 2 1 1 0 803.9203 1526.8619 T845t TMT10 839 (K) DNFFSLtPK (D) DNFFS(0.0)LT(0.99)PK K:TMT10,t:Phosphorylated T SGO2 145877.6 2 2 3156.1 59.09 HUMAN 1 -18.5244 -15.4907 KDNMKYASWAASQIN-p Q15006;S258-p KDNMKYASWAASQIN 0.18878716220005 0.273827528012373 0.227666666666667 -0.105333333333333 14.1827766630347 7.41042815789864 0.227666666666667 -0.105333333333333 0.0381700152706079 0.181533668535399 2.72653871925368 -1.5322338040423 Q15006 EMC2 Q15006.S258.p_EMC2 Q15006_S258s _1_1_258_258 Q15006 Q15006 ER membrane protein complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18574.18574.3 10.02 10.02 6.21 3 1 1 0 525.9223 1495.7855 S258s TMT10 256 (K) YAsWAASQINR (A) Y(0.0)AS(0.99)WAAS(0.0)QINR s:Phosphorylated S EMC2 35004.1 1 1 6708.1 10.02 HUMAN 1 14.1828 -7.4104 KDNVVCLSPKLAQSL-p Q96D46;S258-p KDNVVCLSPKLAQSL 0.41209446543283 0.201640210259578 -0.139 0.134333333333333 7.10296664036805 9.14970298808131 -0.139 0.134333333333333 0.194851312705534 0.121626917786937 -1.47902521677934 1.83360874622457 Q96D46 NMD3 Q96D46.S258.p_NMD3 Q96D46_S258s _1_1_258_258 Q96D46 C9JA08|Q96D46 60S ribosomal export protein NMD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15996.15996.2 12.8 8.94 99 1 1 1 0 785.4087 1489.8449 S258s TMT10 252 (K) DNVVCLsPK (L) DNVVCLS(1.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NMD3 58800.3 2 3 1402.1 146.41 HUMAN 1 -7.103 9.1497 KDPELGFSISGGVGG-p Q96RT1-8;S1342-p KDPELGFSISGGVGG 0.0622808715508477 0.65934492871079 -0.437666666666667 -0.0653333333333333 26.2280758462063 2.47439688076303 -0.437666666666667 -0.0653333333333334 0.0023833751964866 0.565666307602186 -5.36168719166387 -0.611396299265364 Q96RT1 ERBB2IP Q96RT1.8.S1342.p_ERBB2IP Q96RT1-8_S1342s _1_1_1342_1342 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5|Q96RT1-4 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18109.18109.3 12.04 12.04 2.653 2 1 1 0 705.0236 2033.0865 S1342s Hydrogen 1333 (R) VEKDPELGFsISGGVGGR (G) VEKDPELGFS(0.99)IS(0.0)GGVGGR K:TMT10-Lys-Only,s:Phosphorylated S ERBIN 159762.8 1 30 81.1 633.5 HUMAN 1 -26.2281 -2.4744 KDPVSPASQKMVIQG-p Q12888-2;S1109-p KDPVSPASQKMVIQG 0.27708009465287 0.00196928419477048 -0.409666666666667 0.796666666666667 10.5440962664538 42.2728900479855 -0.409666666666667 0.796666666666667 0.0882247371955625 5.92530888850579e-05 -2.07641782909541 11.2024670054685 Q12888 TP53BP1 Q12888.2.S1109.p_TP53BP1 Q12888-2_S1099sS1106sS1109s_3_3_1099_1109 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18082.18082.3 8.7 8.7 3.835 4 3 3 0 1178.6042 3293.9061 S1099s S1106s S1109s TMT10 1090 (R) QSQQPMKPIsPVKDPVsPAsQK (M) QS(0.0)QQPMKPIS(0.99)PVKDPVS(0.99)PAS(0.99)QK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 3 117 3.1 2297.07 HUMAN 1 -10.5441 42.2729 KDQEPKPSPEPAAVS-p Q9H7S9;S252-p KDQEPKPSPEPAAVS 0.581059694963249 0.562303781359271 -0.0753333333333333 0.0813333333333334 4.33641194313992 3.36849952338207 -0.0753333333333333 0.0813333333333334 0.368433240339963 0.460415618554399 -0.980913223825368 0.7941949024375 Q9H7S9 ZNF703 Q9H7S9.S252.p_ZNF703 Q9H7S9_S252s _1_1_252_252 Q9H7S9 Q9H7S9 Zinc finger protein 703 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10854.10854.4 16.22 13.2 2.724 2 1 1 0 944.0067 3693.0378 S252s TMT10 233 (K) NGGGVGGGELDKKDQEPKPsPEPAAVSR (G) NGGGVGGGELDKKDQEPKPS(0.99)PEPAAVS(0.0)R K:TMT10,s:Phosphorylated S ZNF703 58791.3 6 8 1508.1 135.43 HUMAN 1 -4.3364 3.3685 KDQGSTYSGDLESEA-p Q5VZL5;S1091-p KDQGSTYSGDLESEA 0.623263627016129 0.265283068873777 0.0826666666666667 0.136333333333333 3.81515229439459 7.58919165594765 0.0826666666666667 0.136333333333333 0.415417483508198 0.174213110276258 0.881626703469141 1.56333489491962 Q5VZL5 ZMYM4 Q5VZL5.S1091.p_ZMYM4 Q5VZL5_S1091s _1_1_1091_1091 Q5VZL5 Q5VZL5|Q5VZL5-4|Q5VZL5-2|Q5VZL5-3 Zinc finger MYM-type protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25989.25989.4 24.97 24.97 1.188 9 1 1 0 1005.2117 3937.8768 S1091s TMT10 1085 (K) DQGSTYsGDLESEAVSTPHSWEEELNHYALK (S) DQGS(0.0)T(0.0)Y(0.0)S(0.99)GDLES(0.0)EAVS(0.0)T(0.0)PHS(0.0)WEEELNHY(0.0)ALK K:TMT10,s:Phosphorylated S ZMYM4 176265.3 2 12 535.1 278.69 HUMAN 1 3.8152 7.5892 KDQLRQMSIHMEELK-p Q14789-2;S2249-p KDQLRQMSIHMEELK 0.545021211681862 0.0535551330098307 0.086 0.281333333333333 4.866450002388 16.947584647466 0.086 0.281333333333333 0.326103154399118 0.020194892013903 1.07952658730761 3.24985145110333 Q14789 GOLGB1 Q14789.2.S2249.p_GOLGB1 Q14789-2_S2249s _1_1_2249_2249 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18482.18482.3 13.06 10.13 99 1 1 1 0 595.3008 1703.9225 S2249s TMT10 2247 (R) QMsIHMEELK (I) QMS(1.0)IHMEELK K:TMT10,s:Phosphorylated S GOLGB1 378557.2 1 22 93.1 610.98 HUMAN 1 4.8665 16.9476 KDQPPSPSPPPQSEA-p Q7L1V2;S61-p KDQPPSPSPPPQSEA 0.690516196915719 0.025840115819791 -0.0636666666666667 0.321333333333333 3.0150976435418 21.5920943384219 -0.0636666666666667 0.321333333333333 0.499447950865686 0.00693091489497559 -0.723477135054691 4.22490851527182 Q7L1V2 MON1B Q7L1V2.S61.p_MON1B Q7L1V2_S61s _1_1_61_61 Q7L1V2 Q7L1V2 Vacuolar fusion protein MON1 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10862.10862.4 23.06 23.06 3.462 7 1 1 0 712.3549 2766.431 S61s TMT10 53 (K) DKDQPPSPsPPPQSEALSSTSR (L) DKDQPPS(0.0)PS(0.99)PPPQS(0.0)EALS(0.0)S(0.0)T(0.0)S(0.0)R K:TMT10,s:Phosphorylated S MON1B 59672.6 2 2 3036.1 62.53 HUMAN 1 -3.0151 21.5921 KDQQPSGSEGEDDDA-p Q9NXG2;S88-p KDQQPSGSEGEDDDA 0.179710760288548 0.00234487199305355 -0.451333333333333 0.937666666666667 14.7155807914691 40.4458633697564 -0.451333333333333 0.937666666666667 0.0337630693534785 9.02430288090687e-05 -2.825276374083 10.3337377577938 Q9NXG2 THUMPD1 Q9NXG2.S88.p_THUMPD1 Q9NXG2_S88s _1_1_88_88 Q9NXG2 Q9NXG2|H3BNW0 THUMP domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15657.15657.4 21.57 17.91 1.116 3 1 1 0 895.1988 3497.8054 S88s TMT10 78 (K) FTDKDQQPSGsEGEDDDAEAALKK (E) FT(0.0)DKDQQPS(0.0)GS(0.99)EGEDDDAEAALKK K:TMT10,s:Phosphorylated S THUMPD1 39714.1 2 3 1805.1 113.76 HUMAN 1 -14.7156 40.4459 KDQSPPPSPPPSYHP-p Q9P206-3;S684-p KDQSPPPSPPPSYHP 0.178039517852372 0.0269447225862344 -0.21 0.337 14.8152329312396 21.3026735332063 -0.21 0.337 0.0329971709601558 0.00740854028358772 -2.84386925437215 4.16004364494622 Q9P206 KIAA1522 Q9P206.3.S684.p_KIAA1522 Q9P206-3_S680sS684s_2_2_680_684 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13502.13722.3 15.71 15.71 3.19 5 2 2 0 913.4412 2578.3706 S680s S684s TMT10 678 (K) DQsPPPsPPPSYHPPPPPTK (K) DQS(0.99)PPPS(0.99)PPPS(0.0)Y(0.0)HPPPPPT(0.0)K K:TMT10,s:Phosphorylated S KIAA1522 108782.6 2 46 62.1 704.36 HUMAN 1 -14.8152 21.3027 KDRRLQISWHKPKVP-p Q9P2N5;S1012-p KDRRLQISWHKPKVP 0.177928026787036 0.837361090198079 -0.371666666666667 -0.043 14.8502503794269 1.08273437241445 -0.371666666666667 -0.043 0.0327321823579181 0.779339274259846 -2.8504124079724 -0.294475292587558 Q9P2N5 RBM27 Q9P2N5.S1012.p_RBM27 Q9P2N5_S1012s _1_1_1012_1012 Q9P2N5 Q9P2N5 RNA-binding protein 27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18283.18283.4 9.58 9.58 99 1 1 1 0 476.7842 1824.1463 S1012s TMT10 1009 (R) LQIsWHKPK (V) LQIS(1.0)WHKPK K:TMT10,s:Phosphorylated S RBM27 119172.2 1 8 1221.1 164.77 HUMAN 1 -14.8503 -1.0827 KDRSMRKSFDMGGET-p Q9NR82-2;S798-p KDRSMRKSFDMGGET 0.465533819815265 0.0964274565937789 -0.0993333333333333 -0.225666666666667 6.12778320831797 13.4319280486924 -0.0993333333333334 -0.225666666666667 0.243905548032753 0.0453740134170343 -1.3072952951081 -2.58772059623615 Q9NR82 KCNQ5 Q9NR82.2.S798.p_KCNQ5 Q9NR82-2_S798s _1_1_798_798 Q9NR82-2 F8WEA4|Q9NR82-2|A0A0A0MSC0|Q9NR82-5|A0A0A0MT07 Isoform 2 of Potassium voltage-gated channel subfamily KQT member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33427.33427.3 21.72 17.94 6.416 3 1 1 0 836.0789 2426.2534 S798s TMT10 798 (K) sFDMGGETLLSVCPMVPK (D) S(0.99)FDMGGET(0.0)LLS(0.0)VCPMVPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KCNQ5 102286.2 1 5 2456.1 82.72 HUMAN 1 -6.1278 -13.4319 KDSDDDSSDDEQEKK-p Q13435;S436-p KDSDDDSSDDEQEKK 0.252923021341549 0.0294879159752632 -0.325666666666667 0.465166666666667 11.3851209819586 20.7111105936681 -0.325666666666667 0.465166666666667 0.0726922148970572 0.0084896334727567 -2.22372215113821 4.02930906070581 Q13435 SF3B2 Q13435.S436.p_SF3B2 Q13435_S435sS436s_2_2_435_436 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8099.8099.4 13.59 13.59 4.751 3 2 2 0 976.4582 3742.8904 S435s S436s TMT10 421 (K) KKGFEEEHKDSDDDssDDEQEK (K) KKGFEEEHKDS(0.0)DDDS(0.99)S(0.99)DDEQEK K:TMT10,s:Phosphorylated S SF3B2 100339.9 5 17 193.1 462.57 HUMAN 2 -11.3851 20.7111 KDSDDEKSDRNRPWW-p Q14C86-6;S998-p KDSDDEKSDRNRPWW 0.202089387369954 0.0371890447478885 0.682666666666667 -1.042 13.4802749420288 19.216358277089 0.682666666666667 -1.042 0.0448716981775136 0.0119774446420537 2.59798077609618 -3.70945529147603 Q14C86 GAPVD1 Q14C86.6.S998.p_GAPVD1 Q14C86-6_S998s _1_1_998_998 Q14C86-6 Q14C86-6 Isoform 6 of GTPase-activating protein and VPS9 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6601.6601.4 8.9 8.9 8.9 3 1 1 0 833.1484 3249.6037 S998s Hydrogen 985 (R) GETEERKDSDDEKsDRNRPWWR (K) GET(0.0)EERKDS(0.0)DDEKS(0.99)DRNRPWWR K:TMT10-Lys-Only,s:Phosphorylated S GAPVD1 167648.8 1 16 268.1 394.98 HUMAN 1 13.4803 -19.2164 KDSFISNSLPTFFYI-p B2RTY4-5;S1180-p KDSFISNSLPTFFYI 0.0406564911626295 0.00764321811708162 -0.98 -0.793333333333333 31.0474050425025 30.2236964065742 -0.98 -0.793333333333333 0.000785704961774853 0.000949796050505877 -6.7572378462687 -6.49008514033554 B2RTY4 MYO9A B2RTY4.5.S1180.p_MYO9A B2RTY4-5_S1180s _1_1_1180_1180 B2RTY4-5 B2RTY4-4|B2RTY4-2|H3BRD5|B2RTY4-5 Isoform 5 of Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36668.36668.4 20.22 14.93 2.21 5 1 1 0 749.6369 2915.5595 S1180s TMT10 1174 (K) DSFISNsLPTFFYIPQQDPLK (T) DS(0.0)FIS(0.0)NS(0.99)LPT(0.0)FFY(0.0)IPQQDPLK K:TMT10,s:Phosphorylated S MYO9A 267577.4 2 13 457.1 306.95 HUMAN 1 -31.0474 -30.2237 KDSISAVSSEKVSPS-p P46821;S1247-p KDSISAVSSEKVSPS 0.422807784151987 0.169211722443757 -0.211 0.256 6.88855553949332 10.146347139092 -0.211 0.256 0.204712539602919 0.096686376842681 -1.44149100153578 2.00632306292659 P46821 MAP1B P46821.S1247.p_MAP1B P46821_S1247s _1_1_1247_1247 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13232.13232.4 8.91 8.91 1.119 6 1 1 0 572.8151 2208.269 S1247s TMT10 1241 (K) DSISAVsSEKVSPSK (S) DS(0.0)IS(0.0)AVS(0.99)S(0.0)EKVS(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S MAP1B 271827.6 1 8 210.1 442.48 HUMAN 1 -6.8886 10.1463 KDSKPSSTPRSKGQE-p P06748;T219-p KDSKPSSTPRSKGQE 0.0930004911854097 0.00111242594804232 0.542 -1.40533333333333 21.9331915032203 49.5813481201606 0.542 -1.40533333333333 0.00640738543502791 1.10119742702818e-05 4.30666860235961 -15.4103818691716 P06748 NPM1 P06748.T219.p_NPM1 P06748_T219t _1_1_219_219 P06748 P06748|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3918.3919.3 7.54 1.4 1.35 4 1 1 0 504.9326 1432.816 T219t TMT10 213 (K) DSKPSStPR (S) DS(0.0)KPS(0.0)S(0.0)T(0.99)PR K:TMT10,t:Phosphorylated T NPM1 32745.6 12 16 78.1 640.75 HUMAN 1 21.9332 -49.5813 KDSLQELSTEQKCFV-p Q99567;S442-p KDSLQELSTEQKCFV 0.995786650245671 0.659300010506872 -0.001 0.0423333333333334 0.0343891701660769 2.47523598207382 -0.001 0.0423333333333334 0.992112868878243 0.565557025649696 -0.0103500588005095 0.611573931413448 Q99567 NUP88 Q99567.S442.p_NUP88 Q99567_S442s _1_1_442_442 Q99567 Q99567 Nuclear pore complex protein Nup88 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20616.20616.3 19.64 19.64 1.206 4 1 1 0 1022.5135 2985.5508 S442s TMT10 427 (K) FLGSDEEDKDSLQELsTEQK (C) FLGS(0.0)DEEDKDS(0.0)LQELS(0.99)T(0.0)EQK K:TMT10,s:Phosphorylated S NUP88 84681.5 2 7 1211.1 166.39 HUMAN 1 -0.0344 2.4752 KDSPSKSSAEAQTPE-p O43493;S71-p KDSPSKSSAEAQTPE 0.675573848411175 0.021307082498701 0.13 -0.958333333333333 3.19214436262927 22.8572450375451 0.13 -0.958333333333333 0.479496635001224 0.0051793528184657 0.759175953053158 -4.51574408836351 O43493 TGOLN2 O43493.S71.p_TGOLN2 O43493_S71s _1_1_71_71 O43493 O43493|F8W8W7|J3KQ45|O43493-3|O43493-5|O43493-2|O43493-4 Trans-Golgi network integral membrane protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8556.8556.5 18.79 18.79 1.138 6 1 1 0 552.0786 2676.3931 S71s TMT10 65 (K) DSPSKSsAEAQTPEDTPNK (S) DS(0.0)PS(0.0)KS(0.0)S(0.99)AEAQT(0.0)PEDT(0.0)PNK K:TMT10,s:Phosphorylated S TGOLN2 51111.9 7 1 1252.1 161.84 HUMAN 1 3.1921 -22.8572 KDSSGSFSPCQPFLE-p Q6ZRI6;S208-p KDSSGSFSPCQPFLE 0.10231192416723 0.924561092393574 -0.316 -0.0123333333333333 20.9463170493894 0.480596941729772 -0.316 -0.0123333333333333 0.00804207826031527 0.895241705302813 -4.0850480630329 -0.137972090765496 Q6ZRI6 C15orf39 Q6ZRI6.S208.p_C15orf39 Q6ZRI6_S208s _1_1_208_208 Q6ZRI6 Q6ZRI6|Q6ZRI6-2 Uncharacterized protein C15orf39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22132.22132.3 9.34 9.34 2.868 4 1 1 0 742.0184 2144.0734 S208s TMT10 202 (K) DSSGSFsPCQPFLEK (Y) DS(0.0)S(0.0)GS(0.0)FS(0.99)PCQPFLEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C15orf39 112154.2 1 1 2185.1 94.11 HUMAN 1 -20.9463 -0.4806 KDSSGSVSPNTLSQE-p Q9H0J9;S263-p KDSSGSVSPNTLSQE 0.340030512994892 0.710031665957052 0.130666666666667 0.044 8.71610344824799 2.04579036508927 0.130666666666667 0.044 0.134397024954542 0.624339717425051 1.75921998228897 0.518858180756427 Q9H0J9 PARP12 Q9H0J9.S263.p_PARP12 Q9H0J9_S263s _1_1_263_263 Q9H0J9 Q9H0J9|G5E9U9 Poly [ADP-ribose] polymerase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18168.18168.4 16.86 16.86 1.105 7 1 1 0 865.4216 3378.7 S263s TMT10 256 (R) KDSSGSVsPNTLSQEEGDQICLYHIR (K) KDS(0.0)S(0.0)GS(0.0)VS(0.99)PNT(0.0)LS(0.0)QEEGDQICLY(0.0)HIR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PARP12 80545.6 6 1 3822.1 42.46 HUMAN 1 8.7161 2.0458 KDSSLCVSGETLAAG-p P82094-2;S160-p KDSSLCVSGETLAAG 0.171158122502722 0.0363801771972803 0.270666666666667 0.334 15.2895400606036 19.3672068767747 0.270666666666667 0.334 0.0295832575133177 0.0115685602382296 2.93293311920034 3.74108276809427 P82094 TMF1 P82094.2.S160.p_TMF1 P82094-2_S160s _1_1_160_160 P82094-2 P82094-2 Isoform 2 of TATA element modulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13447.13447.5 19.66 17.58 1.273 9 1 1 0 824.0272 4036.1315 S160s TMT10 154 (K) DSSLCVsGETLAAGTSSPKTEGKHEETVNK (E) DS(0.0)S(0.0)LCVS(0.99)GET(0.0)LAAGT(0.0)S(0.0)S(0.0)PKT(0.0)EGKHEET(0.0)VNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TMF1 123666.4 2 5 393.1 331.84 HUMAN 1 15.2895 19.3672 KDSSPSSSPSPKGFR-p Q6WKZ4;S343-p KDSSPSSSPSPKGFR 0.422648449149654 0.0337519316033129 0.122333333333333 -0.327666666666667 6.89118907500072 19.837926267233 0.122333333333333 -0.327666666666667 0.204588440785533 0.0103802394834775 1.44195267076493 -3.84069683670804 Q6WKZ4 RAB11FIP1 Q6WKZ4.S343.p_RAB11FIP1 Q6WKZ4_S343sS345s_2_2_343_345 Q6WKZ4 Q6WKZ4|Q6WKZ4-3|E7EX40|Q6WKZ4-2 Rab11 family-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9743.9743.3 7.92 7.34 1.124 6 2 2 0 784.0569 2190.2221 S343s S345s TMT10 333 (K) GEIKDSSPSSsPsPK (G) GEIKDS(0.0)S(0.0)PS(0.0)S(0.0)S(0.99)PS(0.99)PK K:TMT10,s:Phosphorylated S RAB11FIP1 137564.1 24 23 56.1 721.17 HUMAN 1 6.8912 -19.8379 KDSVPMGSPAFLLSL-p Q9H0E9-2;S924-p KDSVPMGSPAFLLSL 0.223329192805893 0.110204808911674 0.189333333333333 0.206 12.5119045163231 12.6491437769147 0.189333333333333 0.206 0.0560801992991828 0.0543357445294117 2.42347535965822 2.44673319606135 Q9H0E9 BRD8 Q9H0E9.2.S924.p_BRD8 Q9H0E9-2_S924s _1_1_924_924 Q9H0E9-2 Q9H0E9-2|B5MCW3 Isoform 2 of Bromodomain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.37336.37336.3 20.95 20.95 5.349 4 1 1 0 792.7199 2296.1845 S924s TMT10 918 (K) DSVPMGsPAFLLSLFDGGTR (G) DS(0.0)VPMGS(0.99)PAFLLS(0.0)LFDGGT(0.0)R s:Phosphorylated S BRD8 103294.1 3 9 654.1 253.82 HUMAN 1 12.5119 12.6491 KDTDDIESPKRSIRD-p Q9UPQ0-4;S169-p KDTDDIESPKRSIRD 0.223384438939749 0.00781271525487499 -0.205333333333333 -0.529666666666667 12.5077196903097 30.0634776490822 -0.205333333333333 -0.529666666666667 0.0561342637631967 0.000985490030277002 -2.4227273861321 -6.44122185310286 Q9UPQ0 LIMCH1 Q9UPQ0.4.S169.p_LIMCH1 Q9UPQ0-4_S169s _1_1_169_169 Q9UPQ0-4 G5EA03|Q9UPQ0|Q9UPQ0-4|Q9UPQ0-2|Q9UPQ0-10|D6RD46|Q9UPQ0-5|Q9UPQ0-8|D6RJ93|Q9UPQ0-7 Isoform 4 of LIM and calponin homology domains-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6669.6669.3 12.66 12.66 2.956 2 1 1 0 691.0408 1991.1376 S169s TMT10 162 (R) KDTDDIEsPKR (S) KDT(0.0)DDIES(0.99)PKR K:TMT10,s:Phosphorylated S LIMCH1 121463.5 4 4 679.1 246.52 HUMAN 1 -12.5077 -30.0635 KDTEHEESSNDDLVD-p Q86V15;S720-p KDTEHEESSNDDLVD 0.559422364195579 0.703953959582358 -0.0793333333333333 0.0373333333333334 4.65555529385081 2.09547249309386 -0.0793333333333333 0.0373333333333334 0.342329614175274 0.617238135469799 -1.04054098281712 0.529780209175204 Q86V15 CASZ1 Q86V15.S720.p_CASZ1 Q86V15_S720sS721s_2_2_720_721 Q86V15 Q86V15|Q86V15-2 Zinc finger protein castor homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.32704.32926.4 16.28 16.28 3.661 9 2 2 0 1131.0541 4361.2603 S720s S721s TMT10 699 (R) SSGALGLPPSLLGAKDTEHEEssNDDLVDFSALSSK (N) S(0.0)S(0.0)GALGLPPS(0.0)LLGAKDT(0.0)EHEES(0.99)S(0.99)NDDLVDFS(0.0)ALS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CASZ1 193374.5 7 12 530.1 281.17 HUMAN 1 -4.6556 2.0955 KDTHDQLSEPSEVRS-p Q15149;S3975-p KDTHDQLSEPSEVRS 0.854734502857347 0.357057742636353 -0.0713333333333333 0.210333333333333 1.32359377858747 5.93353434660765 -0.0713333333333333 0.210333333333333 0.737293868351897 0.255062472527071 -0.353188410818229 1.27241465848618 Q15149 PLEC Q15149.S3975.p_PLEC Q15149_S3975s _1_1_3975_3975 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7220.7220.3 16.16 14.86 3.156 3 1 1 0 607.9477 1741.8554 S3975s TMT10 3969 (K) DTHDQLsEPSEVR (S) DT(0.0)HDQLS(0.99)EPS(0.0)EVR s:Phosphorylated S PLEC 533778 1 30 44.1 794.85 HUMAN 1 -1.3236 5.9335 KDTKSKVTLLEGDHV-p O75534;T309-p KDTKSKVTLLEGDHV 0.335207264177984 0.601950601922318 0.133 -0.0546666666666666 8.85129617565842 2.98887217375666 0.133 -0.0546666666666666 0.130277789922702 0.502473060608343 1.78262185232572 -0.718050637906321 O75534 CSDE1 O75534.T309.p_CSDE1 O75534_S306sT309t_2_2_306_309 O75534 O75534-4|O75534-3|O75534-2|E9PLT0 Cold shock domain-containing protein E1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26156.26156.4 8.86 1.19 7.99 4 2 2 0 702.1028 2645.4775 S306s T309t TMT10 306 (K) sKVtLLEGDHVRFNISTDR (R) S(0.99)KVT(0.99)LLEGDHVRFNIS(0.0)T(0.0)DR K:TMT10,s:Phosphorylated S,t:Phosphorylated T CSDE1 89738.9 2 12 1077.1 180.35 HUMAN 1 8.8513 -2.9889 KDTVIIVSEPSEDEE-p Q9H4L7-2;S124-p KDTVIIVSEPSEDEE 0.185461409283341 0.624893480826861 0.533 -0.0635 14.3823742899996 2.77754691441958 0.533 -0.0635 0.036455459026837 0.527527748078275 2.76339747391227 -0.674764939011978 Q9H4L7 SMARCAD1 Q9H4L7.2.S124.p_SMARCAD1 Q9H4L7-2_S124sS127s_2_2_124_127 Q9H4L7-2 Q9H4L7-2|D6RAY8 Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25296.25296.3 19.5 18.43 3.285 6 2 2 0 1204.5715 3451.7667 S124s S127s TMT10 114 (K) TFNKDTVIIVsEPsEDEESQGLPTMAR (R) T(0.0)FNKDT(0.0)VIIVS(0.99)EPS(0.99)EDEES(0.0)QGLPT(0.0)MAR K:TMT10,s:Phosphorylated S SMARCAD1 118399.2 17 14 250.1 406.83 HUMAN 2 14.3824 -2.7775 KDVARVESKTVIVTP-p Q16822;S107-p KDVARVESKTVIVTP 0.734217291080444 0.0526523056219609 -0.051 0.37 2.5401190914081 17.05896904227 -0.051 0.37 0.55717047009962 0.0196835349536841 -0.625350796119057 3.27175443576047 Q16822 PCK2 Q16822.S107.p_PCK2 Q16822_S107s _1_1_107_107 Q16822 Q16822|H0YM31|Q16822-2|A0A0A0MS74 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7200.7200.3 9.27 2.1 99 1 1 1 0 481.2656 1361.8153 S107s TMT10 101 (K) DVARVEsK (T) DVARVES(1.0)K K:TMT10,s:Phosphorylated S PCK2 71527.5 1 1 4117.1 37.25 HUMAN 1 -2.5401 17.059 KDVPKRKSLVGTPYW-p Q9NQU5;S560-p KDVPKRKSLVGTPYW 0.88602112979402 0.996999926157672 -0.028 -0.000666666666666649 1.03167711600378 0.0190171800443217 -0.028 -0.000666666666666659 0.788555542137522 0.995630705733884 -0.281805532013376 -0.00573309421685927 Q9NQU5 PAK6 Q9NQU5.S560.p_PAK6 Q9NQU5_S560s _1_1_560_560 Q9NQU5 Q9P286|Q9NQU5 Serine/threonine-protein kinase PAK 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31207.31207.3 24.49 24.49 4.4 4 1 1 0 705.6898 2035.0884 S560s TMT10 560 (K) sLVGTPYWMAPEVISR (S) S(0.99)LVGT(0.0)PY(0.0)WMAPEVIS(0.0)R s:Phosphorylated S PAK6 75380.9 3 2 2876.1 67.52 HUMAN 1 -1.0317 -0.019 KDVRLIFSNSKAYTP-p Q8WWQ0;S1390-p KDVRLIFSNSKAYTP 0.722671061539851 0.7735823353215 -0.051 0.0373333333333334 2.6689051638019 1.54211159829512 -0.051 0.0373333333333334 0.540890661780846 0.70111432430112 -0.652321752416147 0.404786285431558 Q8WWQ0 PHIP Q8WWQ0.S1390.p_PHIP Q8WWQ0_S1390s _1_1_1390_1390 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20796.20796.2 10.18 3.84 2.176 2 1 1 0 673.8789 1266.7822 S1390s TMT10 1387 (R) LIFsNSK (A) LIFS(0.99)NS(0.0)K K:TMT10,s:Phosphorylated S PHIP 208454.1 1 13 108.1 577.05 HUMAN 1 -2.6689 1.5421 KDVRQSLSPMSQRPV-p Q9NSV4;S1093-p KDVRQSLSPMSQRPV 0.654648386241187 0.00273649503124045 0.0623333333333333 -0.754333333333333 3.44830727923167 38.8743267601903 0.0623333333333333 -0.754333333333333 0.452032095592803 0.000129588756939491 0.810086146459376 -9.63639774573023 Q9NSV4 DIAPH3 Q9NSV4.S1093.p_DIAPH3 Q9NSV4_S1093s _1_1_1093_1093 Q9NSV4 Q9NSV4|Q9NSV4-4|Q9NSV4-5|Q9NSV4-6|Q9NSV4-7|Q9NSV4-1 Protein diaphanous homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15414.15414.3 15.02 15.02 2.108 3 1 1 0 670.373 1929.1356 S1093s TMT10 1090 (R) QSLsPMSQRPVLK (V) QS(0.0)LS(0.99)PMS(0.0)QRPVLK K:TMT10,s:Phosphorylated S DIAPH3 138235.7 9 2 3853.1 41.68 HUMAN 1 3.4483 -38.8743 KDVSRLRSVLMSLKQ-p P09497-2;S199-p KDVSRLRSVLMSLKQ 0.571680716249372 0.359042527414509 -0.1 -0.0903333333333333 4.47255680101681 5.90263402544553 -0.1 -0.0903333333333333 0.357062564534915 0.256883729298358 -1.0064483286192 -1.26690236223618 P09497 CLTB P09497.2.S199.p_CLTB P09497-2_S199s _1_1_199_199 P09497-2 P09497-2 Isoform Non-brain of Clathrin light chain B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27178.27178.3 10.32 10.32 10.322 2 1 1 0 528.9814 1504.9649 S199s TMT10 197 (R) LRsVLMSLK (Q) LRS(0.99)VLMS(0.0)LK K:TMT10,s:Phosphorylated S CLTB 23294.9 1 3 4535.1 30.24 HUMAN 1 -4.4726 -5.9026 KDVSRMRSVLISLKQ-p P09496-2;S206-p KDVSRMRSVLISLKQ 0.124817613650063 0.668990133242619 -0.282666666666667 -0.0903333333333333 18.8002242238507 2.38784420060968 -0.282666666666667 -0.0903333333333333 0.0131818867944349 0.577052836233174 -3.62606501764676 -0.593003257482939 P09496 CLTA P09496.2.S206.p_CLTA P09496-2_S206s _1_1_206_206 P09496-2 Q0IIM8|J3KN75|Q0IIM8-3|Q0IIM8-2|D6RFZ2|P09496|P09496-3|P09496-4|P09496-2|C9J8P9|P09496-5 Isoform Non-brain of Clathrin light chain A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19659.19659.2 9.44 5.2 7.267 2 1 1 0 534.8182 988.6604 S206s Hydrogen 206 (R) sVLISLK (Q) S(0.99)VLIS(0.0)LK K:TMT10-Lys-Only,s:Phosphorylated S CLTA 23718.5 4 4 3013.1 63.28 HUMAN 1 -18.8002 -2.3878 KDWSLSKSQVIAEKA-p Q9H7D0;S1742-p KDWSLSKSQVIAEKA 0.635834535480406 0.144515518592739 -0.081 -0.215 3.66752821494735 11.0654391516419 -0.081 -0.215 0.429780966808577 0.0782449081065186 -0.853018729249094 -2.16659420949396 Q9H7D0 DOCK5 Q9H7D0.S1742.p_DOCK5 Q9H7D0_S1742s _1_1_1742_1742 Q9H7D0 Q9H7D0 Dedicator of cytokinesis protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17631.17631.4 11.71 11.71 11.707 3 1 1 0 716.8968 2784.5897 S1742s TMT10 1742 (K) sQVIAEKAPEPDLMSPTRK (A) S(0.99)QVIAEKAPEPDLMS(0.0)PT(0.0)RK K:TMT10,s:Phosphorylated S DOCK5 216331.8 2 7 828.1 217.17 HUMAN 1 -3.6675 -11.0654 KDYKKKLSMQQKQLD-p O43719;S241-p KDYKKKLSMQQKQLD 0.843942307663143 0.0694011609271784 -0.0373333333333334 -0.236 1.42572458929107 15.4058669228687 -0.0373333333333334 -0.236 0.720157588069983 0.0288013806969005 -0.37750288522998 -2.95293293439266 O43719 HTATSF1 O43719.S241.p_HTATSF1 O43719_S241s _1_1_241_241 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10106.10106.3 7.01 7.01 99 1 1 1 0 543.9832 1549.9703 S241s TMT10 239 (K) KLsMQQK (Q) KLS(1.0)MQQK K:TMT10,s:Phosphorylated S HTATSF1 86421.8 1 1 149.1 512 HUMAN 1 -1.4257 -15.4059 KDYLAHSSMDF____-p Q9UJV9;S619-p KDYLAHSSMDF____ 0.857486466676903 0.0168058901594455 0.0286666666666667 0.462666666666667 1.30175553235598 24.4916400636263 0.0286666666666667 0.462666666666667 0.741010644788588 0.00355497043808939 0.347947021165146 4.91019965772882 Q9UJV9 DDX41 Q9UJV9.S619.p_DDX41 Q9UJV9_S619s _1_1_619_619 Q9UJV9 Q9UJV9 Probable ATP-dependent RNA helicase DDX41 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20746.20746.2 9.79 9.79 1.131 3 1 1 0 747.8153 1414.651 S619s TMT10 613 (K) DYLAHSsMDF (-) DY(0.0)LAHS(0.0)S(0.99)MDF s:Phosphorylated S DDX41 70521.1 1 5 1480.1 138.65 HUMAN 1 1.3018 24.4916 KDYLLSESEDEGDND-p Q9BVJ6;S31-p KDYLLSESEDEGDND 0.221440669353428 0.00580592124960547 -0.270666666666667 0.493333333333333 12.6014698070644 32.3239635072344 -0.270666666666667 0.493333333333333 0.0549354921139546 0.000585603480519862 -2.43949574769857 7.15904248335426 Q9BVJ6 UTP14A Q9BVJ6.S31.p_UTP14A Q9BVJ6_S31s _1_1_31_31 Q9BVJ6 Q9BVJ6|Q9BVJ6-3 U3 small nucleolar RNA-associated protein 14 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14433.14433.3 12.77 12.77 1.102 3 1 1 0 870.3923 2529.1993 S31s TMT10 25 (K) DYLLSEsEDEGDNDGERK (H) DY(0.0)LLS(0.0)ES(0.99)EDEGDNDGERK K:TMT10,s:Phosphorylated S UTP14A 88147.4 3 4 550.1 274.41 HUMAN 1 -12.6015 32.324 KEAASGTTPQKSRKP-p E7ETY2;T1270-p KEAASGTTPQKSRKP 0.133329486764844 0.0127185670821738 1.976 -1.01266666666667 18.0239247424959 26.4220256196269 1.976 -1.01266666666667 0.015761862179549 0.00227927873161637 3.46710880775428 -5.40593193565292 E7ETY2 TCOF1 E7ETY2.T1270.p_TCOF1 E7ETY2_T1270t _1_1_1270_1270 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6191.6191.3 10.06 10.06 1.379 4 1 1 0 700.717 2020.1642 T1270t TMT10 1260 (K) TGGKEAASGTtPQK (S) T(0.0)GGKEAAS(0.0)GT(0.0)T(0.99)PQK K:TMT10,t:Phosphorylated T TCOF1 152529.5 6 31 19.1 1034.65 HUMAN 1 18.0239 -26.422 KEACDLCSDFSDEEP-p Q5T890;S766-p KEACDLCSDFSDEEP 0.30062605052911 0.703953959582358 -0.177333333333333 0.0443333333333334 9.80401207189116 2.09514122108578 -0.177333333333333 0.0443333333333334 0.104616164304883 0.617285219078678 -1.94767991251944 0.529707562546107 Q5T890 ERCC6L2 Q5T890.S766.p_ERCC6L2 Q5T890_S766sS769s_2_2_766_769 Q5T890 Q5T890 DNA excision repair protein ERCC-6-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24012.24012.3 13.65 13.65 6.205 3 2 2 0 973.4165 2758.2952 S766s S769s TMT10 760 (K) EACDLCsDFsDEEPVGATGIK (T) EACDLCS(0.99)DFS(0.99)DEEPVGAT(0.0)GIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ERCC6L2 179064 1 4 3196.1 57.87 HUMAN 1 -9.804 2.0951 KEADIDSSDESDIEE-p Q9P2I0;S420-p KEADIDSSDESDIEE 0.573276533538498 0.130632858899369 -0.104666666666667 0.180333333333333 4.44629617273273 11.6479553851877 -0.104666666666667 0.180333333333333 0.359228167383332 0.0684233701821738 -1.00153463760123 2.26894955664817 Q9P2I0 CPSF2 Q9P2I0.S420.p_CPSF2 Q9P2I0_S419sS420sS423s_3_3_419_423 Q9P2I0 Q9P2I0 Cleavage and polyadenylation specificity factor subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20023.20442.3 15.82 15.82 10.709 4 3 3 0 1081.7695 3003.3955 S419s S420s S423s TMT10 414 (K) EADIDssDEsDIEEDIDQPSAHK (T) EADIDS(0.99)S(0.99)DES(0.99)DIEEDIDQPS(0.0)AHK K:TMT10,s:Phosphorylated S CPSF2 89341 7 3 3554.1 48.31 HUMAN 1 -4.4463 11.648 KEAEDSDSDDNIKRG-p Q96ST2;S513-p KEAEDSDSDDNIKRG 0.37550402812562 0.023509919426035 -0.307666666666667 0.492 7.86573824407807 22.2145767262065 -0.307666666666667 0.492 0.16346552573993 0.0060054053617297 -1.6118608499033 4.36649515288359 Q96ST2 IWS1 Q96ST2.S513.p_IWS1 Q96ST2_S511sS513s_2_2_511_513 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10484.10484.2 11.3 11.3 99 2 2 2 0 978.3974 1795.8598 S511s S513s TMT10 507 (K) EAEDsDsDDNIK (R) EAEDS(1.0)DS(1.0)DDNIK K:TMT10,s:Phosphorylated S IWS1 92010 6 19 230.1 422.87 HUMAN 1 -7.8657 22.2146 KEAEEESSGGEEEDE-p P55010;S390-p KEAEEESSGGEEEDE 0.454180425050792 0.399752078749365 -0.116333333333333 0.104666666666667 6.32245429623429 5.29624289980719 -0.116333333333333 0.104666666666667 0.233213974495239 0.295376343509717 -1.34180926879477 1.15783370988297 P55010 EIF5 P55010.S390.p_EIF5 P55010_S389sS390s_2_2_389_390 P55010 P55010 Eukaryotic translation initiation factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21768.21768.2 18.5 18.5 13.454 4 2 2 0 1660.6809 3160.4218 S389s S390s TMT10 384 (K) EAEEEssGGEEEDEDENIEVVYSK (A) EAEEES(0.99)S(0.99)GGEEEDEDENIEVVY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S EIF5 49678.3 35 10 980.1 192.67 HUMAN 1 -6.3225 5.2962 KEAFLVLSDEEDISG-p Q6VMQ6-4;S504-p KEAFLVLSDEEDISG 0.48046826185149 0.27324476987538 -0.243666666666667 0.145666666666667 5.86038429379833 7.42213497110961 -0.243666666666667 0.145666666666667 0.259394982134039 0.18104498652403 -1.25965201032805 1.53427211758826 Q6VMQ6 ATF7IP Q6VMQ6.4.S504.p_ATF7IP Q6VMQ6-4_S504s _1_1_504_504 Q6VMQ6-4 Q6VMQ6-4|Q6VMQ6-5|Q6VMQ6-2 Isoform 3 of Activating transcription factor 7-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27322.27322.3 16.28 16.28 4.186 2 1 1 0 773.7187 2239.1746 S504s TMT10 498 (K) EAFLVLsDEEDISGEK (D) EAFLVLS(0.99)DEEDIS(0.0)GEK K:TMT10,s:Phosphorylated S ATF7IP 138346.3 5 8 273.1 392.91 HUMAN 1 -5.8604 7.4221 KEAGDAESRVFYLKM-p P31947;S116-p KEAGDAESRVFYLKM 0.911605742223265 0.33131166265724 0.0163333333333333 0.165666666666667 0.784217019454594 6.35577627876852 0.0163333333333333 0.165666666666667 0.834792037642323 0.231431447738224 0.218839824134856 1.34736523384604 P31947 SFN P31947.S116.p_SFN P31947_S116s _1_1_116_116 P31947 P31947 14-3-3 protein sigma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18441.18441.3 12.74 12.74 12.742 2 1 1 0 675.0154 1943.0638 S116s TMT10 110 (K) EAGDAEsRVFYLK (M) EAGDAES(0.99)RVFY(0.0)LK K:TMT10,s:Phosphorylated S SFN 27887.7 1 8 2349.2 87.09 HUMAN 1 0.7842 6.3558 KEAGLSQSHDDLSNA-p O14523;S662-p KEAGLSQSHDDLSNA 0.950454138446055 0.507714535980409 0.00966666666666666 0.0813333333333334 0.437065378575506 3.94514968348291 0.00966666666666666 0.0813333333333334 0.904260295498943 0.403167050690507 0.126027654961531 0.906478315508746 O14523 C2CD2L O14523.S662.p_C2CD2L O14523_S662s _1_1_662_662 O14523 O14523-2 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10022.10022.3 19.83 19.83 3.753 6 1 1 0 984.1611 2870.5008 S662s TMT10 654 (R) QKEAGLSQsHDDLSNATATPSVR (K) QKEAGLS(0.0)QS(0.99)HDDLS(0.0)NAT(0.0)AT(0.0)PS(0.0)VR K:TMT10,s:Phosphorylated S C2CD2L 76636.4 10 15 411.1 322.51 HUMAN 1 0.4371 3.9451 KEAKSETSGPQIKEL-p Q9Y266;S100-p KEAKSETSGPQIKEL 0.962553763055712 0.514165156540718 0.00699999999999999 -0.078 0.320454432251486 3.87664815072227 0.00699999999999999 -0.078 0.928869187709097 0.409576645680655 0.093502067865485 -0.893328231119285 Q9Y266 NUDC Q9Y266.S100.p_NUDC Q9Y266_S100s _1_1_100_100 Q9Y266 Q9Y266 Nuclear migration protein nudC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9696.9696.2 7.97 7.97 7.966 3 1 1 0 742.8929 1404.8099 S100s TMT10 97 (K) SETsGPQIK (E) S(0.0)ET(0.0)S(0.99)GPQIK K:TMT10,s:Phosphorylated S NUDC 38299.3 2 1 739.1 234.62 HUMAN 1 0.3205 -3.8766 KEARACRTPESFLGP-p Q9H201;T495-p KEARACRTPESFLGP 0.120014369208718 0.022724566391274 0.282666666666667 0.324 19.1494958651601 22.4413890077209 0.282666666666667 0.324 0.0121632718533732 0.00569981945316944 3.69875361482943 4.41880608028682 Q9H201 EPN3 Q9H201.T495.p_EPN3 Q9H201_T495t _1_1_495_495 Q9H201 Q9H201 Epsin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31567.31774.4 21.06 21.65 1.122 6 1 1 0 772.405 3006.6334 T495t TMT10 492 (R) ACRtPESFLGPSASSLVNLDSLVK (A) ACRT(0.99)PES(0.0)FLGPS(0.0)AS(0.0)S(0.0)LVNLDS(0.0)LVK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T EPN3 68392.2 20 12 953.1 196.01 HUMAN 1 19.1495 22.4414 KEASEDASALGSSSY-p Q9Y4C8;S489-p KEASEDASALGSSSY 0.613352365905399 0.13655776352759 0.0763333333333333 0.168666666666667 3.93763596238523 11.3936446180735 0.0763333333333333 0.168666666666667 0.403865173022929 0.072549686178918 0.905189762466969 2.22417752790237 Q9Y4C8 RBM19 Q9Y4C8.S489.p_RBM19 Q9Y4C8_S489s _1_1_489_489 Q9Y4C8 Q9Y4C8 Probable RNA-binding protein 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11634.11634.3 13.88 13.88 1.227 6 1 1 0 799.7476 2317.249 S489s TMT10 483 (K) EASEDAsALGSSSYKK (K) EAS(0.0)EDAS(0.99)ALGS(0.0)S(0.0)S(0.0)Y(0.0)KK K:TMT10,s:Phosphorylated S RBM19 107786.2 1 2 3983.1 39.73 HUMAN 1 3.9376 11.3936 KEASGGDSPKDDSKP-p Q01167;S252-p KEASGGDSPKDDSKP 0.112507468607091 0.0110471274398859 -0.545333333333333 0.516666666666667 19.8130369900911 27.4080358050784 -0.545333333333334 0.516666666666667 0.0104398990926187 0.00181633695646284 -3.83894048845012 5.67268335624528 Q01167 FOXK2 Q01167.S252.p_FOXK2 Q01167_S252s _1_1_252_252 Q01167 Q01167|Q01167-2|Q01167-3 Forkhead box protein K2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36730.36730.4 25.98 22.28 1.165 7 1 1 0 1094.8215 4296.288 S252s TMT10 246 (K) EASGGDsPKDDSKPPYSYAQLIVQAITMAPDK (Q) EAS(0.0)GGDS(0.99)PKDDS(0.0)KPPY(0.0)S(0.0)Y(0.0)AQLIVQAIT(0.0)MAPDK K:TMT10,s:Phosphorylated S FOXK2 69288.9 14 7 689.1 243.19 HUMAN 1 -19.813 27.408 KEASTAVSTPEAPEP-p Q15477;S270-p KEASTAVSTPEAPEP 0.962849921197336 0.348058644969294 -0.011 0.106333333333333 0.317246120509302 6.07510747685944 -0.011 0.106333333333333 0.929555635057398 0.246881900714702 -0.0925966530755117 1.29762000267853 Q15477 SKIV2L Q15477.S270.p_SKIV2L Q15477_S270sT271t_2_2_270_271 Q15477 Q15477 Helicase SKI2W HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32185.32383.4 21.58 17.15 1.944 8 2 2 0 1030.4709 3958.9184 S270s T271t TMT10 264 (K) EASTAVstPEAPEPPSQEQWAIPVDATSPVGDFYR (L) EAS(0.0)T(0.0)AVS(0.99)T(0.99)PEAPEPPS(0.0)QEQWAIPVDAT(0.0)S(0.0)PVGDFY(0.0)R s:Phosphorylated S,t:Phosphorylated T SKIV2L 138722.7 1 5 2186.1 94.08 HUMAN 1 -0.3172 6.0751 KEAVREGSPANWKRK-p O96019;S233-p KEAVREGSPANWKRK 0.923168713800596 0.151435219300912 0.017 0.174666666666667 0.682178616524129 10.7800447831228 0.017 0.174666666666667 0.854637880519126 0.0835594401792122 0.192139294856278 2.1166857405305 O96019 ACTL6A O96019.S233.p_ACTL6A O96019_S233s _1_1_233_233 O96019 O96019|O96019-2 Actin-like protein 6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10815.11020.3 11.96 8.24 99 1 1 1 0 627.9931 1801.9961 S233s TMT10 227 (K) EAVREGsPANWK (R) EAVREGS(1.0)PANWK K:TMT10,s:Phosphorylated S ACTL6A 47973.6 10 3 2667.1 74.49 HUMAN 1 0.6822 10.78 KECPLSQSMISSIVN-p Q01826-2;S214-p KECPLSQSMISSIVN 0.298583715457429 0.0715041940729791 -0.165666666666667 -0.279666666666667 9.86717181575598 15.2298673615603 -0.165666666666667 -0.279666666666667 0.103105734031115 0.02999254118197 -1.95864264185255 -2.91973403386564 Q01826 SATB1 Q01826.2.S214.p_SATB1 Q01826-2_S214s _1_1_214_214 Q01826-2 Q01826-2 Isoform 2 of DNA-binding protein SATB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35533.35533.3 18.95 18.95 2.298 9 1 1 0 1086.8585 3178.6165 S214s TMT10 208 (K) ECPLSQsMISSIVNSTYYANVSAAK (C) ECPLS(0.0)QS(0.99)MIS(0.0)S(0.0)IVNS(0.0)T(0.0)Y(0.0)Y(0.0)ANVS(0.0)AAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SATB1 89467.4 5 4 821.1 218.79 HUMAN 1 -9.8672 -15.2299 KECSTDLSI______-p Q96QZ7;S1490-p KECSTDLSI______ 0.464144996085896 0.0465549049962377 0.105 0.251 6.1511202699645 17.8202492437633 0.105 0.251 0.242598422762772 0.0165186699404021 1.31144004657642 3.42321088318516 Q96QZ7 MAGI1 Q96QZ7.S1490.p_MAGI1 Q96QZ7_S1490s _1_1_1490_1490 Q96QZ7 Q96QZ7|Q96QZ7-2|Q96QZ7-6|Q96QZ7-7|A0A087WT53 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17593.17593.2 7.21 7.21 7.214 3 1 1 0 617.2678 1153.5608 S1490s TMT10 1484 (K) ECSTDLsI (-) ECS(0.0)T(0.0)DLS(0.99)I C:Carbamidomethylation,s:Phosphorylated S MAGI1 165548 1 12 1223.1 164.72 HUMAN 1 6.1511 17.8202 KEDAANNYARGHYTI-p F5H5D3;Y173-p KEDAANNYARGHYTI 0.857166691692738 0.296635608734828 -0.035 0.110333333333333 1.30431441685487 6.96763261014191 -0.035 0.110333333333333 0.740574166263637 0.201018829107812 -0.348561965362928 1.45494616943811 F5H5D3 TUBA1C F5H5D3.Y173.p_TUBA1C F5H5D3_Y173y _1_1_173_173 F5H5D3 F5H5D3|Q71U36|P68363|Q13748|Q9BQE3|Q9NY65|P68366|P68366-2|Q13748-2|Q71U36-2|Q9NY65-2|P68363-2 Tubulin alpha chain GG20160819_MSz_CCLE_T4D7_pY_Injection_02.23337.23390.4 21.7 21.16 2.151 2 1 1 0 739.1286 2873.531 Y173y TMT10 155 (R) QLFHPEQLITGKEDAANNyAR (G) QLFHPEQLIT(0.0)GKEDAANNY(0.99)AR K:TMT10,y:Phosphorylated Y TUBA1C 58642 2 1 76.1 33.01 HUMAN 1 -1.3043 6.9676 KEDCSDGSDEKDCDC-p Q9Y5Y6;S597-p KEDCSDGSDEKDCDC 0.327442379268563 0.701694375443354 0.135333333333333 -0.0543333333333333 9.069857562403 2.11425395918957 0.135333333333333 -0.0543333333333333 0.123883721658898 0.614574595642187 1.8204563844273 -0.53389500737382 Q9Y5Y6 ST14 Q9Y5Y6.S597.p_ST14 Q9Y5Y6_S597s _1_1_597_597 Q9Y5Y6 Q9Y5Y6 Suppressor of tumorigenicity 14 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8436.8436.4 8.04 8.04 1.674 2 1 1 0 911.3838 3562.5394 S597s TMT10 583 (K) GNPECDGKEDCSDGsDEKDCDCGLR (S) GNPECDGKEDCS(0.0)DGS(0.99)DEKDCDCGLR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ST14 97050.2 1 2 4432.1 31.5 HUMAN 1 9.0699 -2.1143 KEDDDFETDSDDLIE-p O14647;T240-p KEDDDFETDSDDLIE 0.936107507392066 0.00618650355766278 -0.0243333333333333 0.533666666666667 0.562172747719414 31.8269953557562 -0.0243333333333333 0.533666666666667 0.878582857435239 0.000656599374130017 -0.160134960285052 6.99584639856317 O14647 CHD2 O14647.T240.p_CHD2 O14647_T240tS242s_2_2_240_242 O14647 O14647|O14647-2|B7Z3I4|O14647-3|A0A0D9SGK0 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25721.25721.4 21.58 21.58 1.111 7 2 2 0 1272.5521 4927.2566 T240t S242s TMT10 229 (K) NVSYKEDDDFEtDsDDLIEMTGEGVDEQQDNSETIEK (V) NVS(0.0)Y(0.0)KEDDDFET(0.99)DS(0.99)DDLIEMT(0.0)GEGVDEQQDNS(0.0)ET(0.0)IEK K:TMT10,t:Phosphorylated T,s:Phosphorylated S CHD2 212309.6 5 14 482.1 298.11 HUMAN 1 -0.5622 31.827 KEDEEMKTDSDDLLE-p O14646;T250-p KEDEEMKTDSDDLLE 0.630558105709775 0.169775455599321 0.0676666666666667 0.158666666666667 3.72515960715118 10.1268445325545 0.0676666666666667 0.158666666666667 0.424115396999534 0.0971215370039649 0.864214995343606 2.00293498829456 O14646 CHD1 O14646.T250.p_CHD1 O14646_T250tS252s_2_2_250_252 O14646 O14646|O14646-2 Chromodomain-helicase-DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26049.26049.5 19.14 16.79 2.504 6 2 2 0 1159.924 5619.6609 M248m T250t S252s TMT10 235 (R) QATVNVSYKEDEEmKtDsDDLLEVCGEDVPQPEEEEFETIER (F) QAT(0.0)VNVS(0.0)Y(0.0)KEDEEM(1.0)KT(0.99)DS(0.99)DDLLEVCGEDVPQPEEEEFET(0.0)IER K:TMT10,C:Carbamidomethylation,m:Oxidized methionine,t:Phosphorylated T,s:Phosphorylated S CHD1 197825.1 2 14 848.1 212.75 HUMAN 1 3.7252 10.1268 KEDELWASFLNDVGP-p Q9UEE9;S116-p KEDELWASFLNDVGP 0.233628206047255 0.979400169254558 -0.194 -0.004 12.1135769804013 0.128884660170499 -0.194 -0.00400000000000002 0.0614670403075006 0.970759242212984 -2.35249629014537 -0.0383786630008068 Q9UEE9 CFDP1 Q9UEE9.S116.p_CFDP1 Q9UEE9_S116s _1_1_116_116 Q9UEE9 Q9UEE9|Q9UEE9-2 Craniofacial development protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29083.29083.4 16.87 12.71 99 1 1 1 0 743.9111 2892.6641 S116s TMT10 108 (K) KKEDELWAsFLNDVGPK (S) KKEDELWAS(1.0)FLNDVGPK K:TMT10,s:Phosphorylated S CFDP1 33592.3 1 2 2807.1 69.95 HUMAN 1 -12.1136 -0.1289 KEDKGEDSEPVTSKA-p A0A0U1RRM6;S709-p KEDKGEDSEPVTSKA 0.223122749971548 0.921442276123396 0.181333333333333 0.01 12.5257743417827 0.499380129261889 0.181333333333333 0.01 0.0559013847194861 0.891378155915283 2.42595473333448 0.143101088478965 A0A0U1RRM6 NotFound A0A0U1RRM6.S709.p_NotFound A0A0U1RRM6_S709s _1_1_709_709 A0A0U1RRM6 A0A0U1RRM6 Protein enabled homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10233.10233.5 15.05 10.3 3.584 6 1 1 0 678.9533 3310.7672 S709s TMT10 694 (K) GSTIETEQKEDKGEDsEPVTSK (A) GS(0.0)T(0.0)IET(0.0)EQKEDKGEDS(0.99)EPVT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ENAH 87740.8 1 6 794.2 224.28 HUMAN 1 12.5258 0.4994 KEDQFNGSPPRPQPR-p Q69YN4;S173-p KEDQFNGSPPRPQPR 0.242521649997326 0.433550584331173 0.170666666666667 0.0756666666666667 11.7689045821916 4.83624533537033 0.170666666666667 0.0756666666666667 0.0665440978729347 0.328379068410144 2.29141054613255 1.0737509596676 Q69YN4 KIAA1429 Q69YN4.S173.p_KIAA1429 Q69YN4_S173s _1_1_173_173 Q69YN4 Q69YN4|Q69YN4-3|Q69YN4-2|Q69YN4-4 Protein virilizer homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6249.6460.4 17.61 17.61 99 1 1 1 0 700.8446 2720.3905 S173s TMT10 161 (K) HADGEKEDQFNGsPPRPQPR (G) HADGEKEDQFNGS(1.0)PPRPQPR K:TMT10,s:Phosphorylated S VIRMA 203675.9 10 3 1178.1 169.26 HUMAN 1 11.7689 4.8362 KEDRGKRSEGGHRGF-p Q9Y2W1;S508-p KEDRGKRSEGGHRGF 0.421053324853859 0.503597067015662 0.316 -0.0926666666666667 6.92032265773967 3.99053995429196 0.316 -0.0926666666666667 0.203220602321068 0.398975295050861 1.44705878201134 -0.915166145789643 Q9Y2W1 THRAP3 Q9Y2W1.S508.p_THRAP3 Q9Y2W1_S508s _1_1_508_508 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6551.6551.3 8.3 8.3 99 1 1 1 0 536.9282 1528.807 S508s Hydrogen 508 (R) sEGGHRGFVPEK (N) S(1.0)EGGHRGFVPEK K:TMT10-Lys-Only,s:Phosphorylated S THRAP3 108720.9 1 73 10.2 1293.04 HUMAN 1 6.9203 -3.9905 KEDRSASSGAEGDVS-p Q8TEA8;S197-p KEDRSASSGAEGDVS 0.342628074928273 0.648631882286489 0.174333333333333 0.0476666666666667 8.64190830421736 2.56454239829977 0.174333333333333 0.0476666666666667 0.136712797307569 0.554045918845154 1.74637598216344 0.630406480526994 Q8TEA8 DTD1 Q8TEA8.S197.p_DTD1 Q8TEA8_S197s _1_1_197_197 Q8TEA8 Q8TEA8 D-aminoacyl-tRNA deacylase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5827.6539.2 10.43 10.43 1.17 5 1 1 0 937.4053 1793.8351 S197s TMT10 194 (R) SASsGAEGDVSSEREP (-) S(0.0)AS(0.0)S(0.99)GAEGDVS(0.0)S(0.0)EREP s:Phosphorylated S DTD1 23594.3 7 2 3211.1 57.31 HUMAN 1 8.6419 2.5645 KEDSQPPTPVSQRSE-p J3KMZ8;T262-p KEDSQPPTPVSQRSE 0.128918631797654 0.0719128234737837 0.660333333333333 0.658 18.4236116010805 15.1943601931408 0.660333333333334 0.658 0.0143760256802291 0.0302387601805781 3.54850919450455 2.91305252320753 J3KMZ8 DPF2 J3KMZ8.T262.p_DPF2 J3KMZ8_S258sT262t_2_2_258_262 J3KMZ8 J3KMZ8|Q92785 Zinc finger protein ubi-d4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9376.9376.5 23.23 23.23 3.052 7 2 2 0 896.6145 4319.1118 S258s T262t TMT10 234 (K) NRPGLSYHYAHSHLAEEEGEDKEDsQPPtPVSQR (S) NRPGLS(0.0)Y(0.0)HY(0.0)AHS(0.0)HLAEEEGEDKEDS(0.99)QPPT(0.99)PVS(0.0)QR K:TMT10,s:Phosphorylated S,t:Phosphorylated T DPF2 46920.6 1 6 1300.1 156.5 HUMAN 1 18.4236 15.1944 KEEEEDGTGSPQLNN-p P49407;T410-p KEEEEDGTGSPQLNN 0.176546701851388 0.013271733212951 0.231666666666667 0.483666666666667 14.9344886962997 26.1107530049772 0.231666666666667 0.483666666666667 0.0321034074188818 0.00244863864585713 2.86617347928593 5.32367720160295 P49407 ARRB1 P49407.T410.p_ARRB1 P49407_T410tS412s_2_2_410_412 P49407 P49407|P49407-2 Beta-arrestin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8997.8997.4 12.31 12.31 99 2 2 2 0 799.8632 3036.5147 T410t S412s TMT10 398 (K) GMKDDKEEEEDGtGsPQLNNR (-) GMKDDKEEEEDGT(1.0)GS(1.0)PQLNNR K:TMT10,t:Phosphorylated T,s:Phosphorylated S ARRB1 47464.2 2 4 1962.1 105.05 HUMAN 1 14.9345 26.1108 KEEEEGISQESSEEE-p P17096;S99-p KEEEEGISQESSEEE 0.296473227903219 0.0352412799548924 0.148 0.269666666666667 9.94382527656835 19.5613991620117 0.148 0.269666666666667 0.101301872326071 0.0110626732156874 1.97195260970241 3.78200742084528 P17096 HMGA1 P17096.S99.p_HMGA1 P17096_S99sS102sS103s_3_3_99_103 P17096 P17096|P17096-2 High mobility group protein HMG-I/HMG-Y HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14256.14256.2 8.33 8.33 99 3 3 3 0 1582.694 2924.4827 S99s S102s S103s TMT10 89 (K) KLEKEEEEGIsQEssEEEQ (-) KLEKEEEEGIS(1.0)QES(1.0)S(1.0)EEEQ K:TMT10,s:Phosphorylated S HMGA1 11675.8 36 11 1152.1 172.09 HUMAN 1 9.9438 19.5614 KEEENADSDDEGELQ-p Q96NB3;S351-p KEEENADSDDEGELQ 0.381381938406044 0.151016134855453 0.13 0.161666666666667 7.73796282507576 10.7949646850969 0.13 0.161666666666667 0.168346354968847 0.083272869733853 1.58966857171546 2.11929138245043 Q96NB3 ZNF830 Q96NB3.S351.p_ZNF830 Q96NB3_S351s _1_1_351_351 Q96NB3 Q96NB3 Zinc finger protein 830 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24901.24901.3 22.39 18.43 7.74 2 1 1 0 1329.6444 3906.9448 S351s TMT10 340 (K) ELQKKEEENADsDDEGELQDLLSQDWR (V) ELQKKEEENADS(0.99)DDEGELQDLLS(0.0)QDWR K:TMT10,s:Phosphorylated S ZNF830 42169.1 11 2 2198.1 93.8 HUMAN 1 7.738 10.795 KEEERPSSEDEIALH-p P41182;S308-p KEEERPSSEDEIALH 0.308184669593711 0.586854778928161 0.168666666666667 0.0563333333333334 9.55364622069805 3.12937520288428 0.168666666666667 0.0563333333333334 0.11082439724654 0.486477187626203 1.90425662713923 0.746462171487698 P41182 BCL6 P41182.S308.p_BCL6 P41182_S307sS308s_2_2_307_308 P41182 P41182|P41182-2 B-cell lymphoma 6 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19503.19503.4 12.04 6.41 1.135 3 2 2 0 920.9363 3520.8072 S307s S308s TMT10 299 (K) ASKEEERPssEDEIALHFEPPNAPLNR (K) AS(0.0)KEEERPS(0.99)S(0.99)EDEIALHFEPPNAPLNR K:TMT10,s:Phosphorylated S BCL6 80670.9 2 16 557.1 273.04 HUMAN 1 9.5536 3.1294 KEEGAAPSPTHVAEL-p Q9NRS6;S227-p KEEGAAPSPTHVAEL 0.299347208349705 0.0814348975501825 0.285666666666667 0.331 9.84961420653843 14.4411810375527 0.285666666666667 0.331 0.1035234124748 0.0359651516803012 1.95559477045156 2.77255926425876 Q9NRS6 SNX15 Q9NRS6.S227.p_SNX15 Q9NRS6_S227s _1_1_227_227 Q9NRS6 Q9NRS6 Sorting nexin-15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36878.36878.5 33.36 28.7 1.132 6 1 1 0 928.0632 4556.3271 S227s TMT10 205 (R) GPLTEAELALFDPFSKEEGAAPsPTHVAELATMEVESAR (L) GPLT(0.0)EAELALFDPFS(0.0)KEEGAAPS(0.99)PT(0.0)HVAELAT(0.0)MEVES(0.0)AR K:TMT10,s:Phosphorylated S SNX15 38347.3 4 4 1316.1 154.83 HUMAN 1 9.8496 14.4412 KEEKKEDSEKEAKKS-p Q9BXP5;S341-p KEEKKEDSEKEAKKS 0.649743378726889 0.00313032416599167 -0.142333333333333 0.797666666666667 3.51351332159079 37.6260285937505 -0.142333333333333 0.797666666666667 0.445295870672709 0.000172741680640266 -0.822914757369811 9.11317447309311 Q9BXP5 SRRT Q9BXP5.S341.p_SRRT Q9BXP5_S341s _1_1_341_341 Q9BXP5 Q9BXP5|Q9BXP5-3|Q9BXP5-2|Q9BXP5-4|Q9BXP5-5 Serrate RNA effector molecule homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6544.6544.5 10.17 10.17 10.171 2 1 1 0 719.3885 3512.9507 S341s TMT10 328 (K) SEGDGDKEEKKEDsEKEAK (K) S(0.0)EGDGDKEEKKEDS(0.99)EKEAK K:TMT10,s:Phosphorylated S SRRT 101121.1 3 8 321.1 364.45 HUMAN 1 -3.5135 37.626 KEEKVRASGDAKIKK-p P11387;S97-p KEEKVRASGDAKIKK 0.092814869856983 0.0463977521109509 0.630333333333333 0.525333333333333 21.9700645298843 17.8425816663534 0.630333333333334 0.525333333333334 0.00635321491822308 0.0164339451586126 4.3150871772741 3.42770138242062 P11387 TOP1 P11387.S97.p_TOP1 P11387_S97s _1_1_97_97 P11387 P11387 DNA topoisomerase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.4587.4587.3 8.13 8.13 99 1 1 1 0 447.915 1261.7629 S97s TMT10 94 (K) VRAsGDAK (I) VRAS(1.0)GDAK K:TMT10,s:Phosphorylated S TOP1 91180.5 1 3 1682.1 121.32 HUMAN 1 21.9701 17.8426 KEELEQQTDGDCEED-p Q99442;T375-p KEELEQQTDGDCEED 0.049158581421578 0.995915507123892 -0.644666666666667 0.00200000000000002 28.9718467118776 0.0246485197634421 -0.644666666666667 0.00200000000000001 0.00126711294809428 0.994340543984739 -6.12530332340283 0.00742599039091527 Q99442 SEC62 Q99442.T375.p_SEC62 Q99442_T375t _1_1_375_375 Q99442 Q99442 Translocation protein SEC62 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.11012.11012.3 19.41 19.41 6.84 2 1 1 0 1164.8053 3412.4382 T375t TMT10 369 (K) EELEQQtDGDCEEDEEEENDGETPK (S) EELEQQT(0.99)DGDCEEDEEEENDGET(0.0)PK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T SEC62 46203.3 7 5 1276.1 159.11 HUMAN 1 -28.9718 0.0246 KEELRAVSPEEGARV-p Q8TE68;S676-p KEELRAVSPEEGARV 0.447122526893569 0.0165705183711879 -0.135666666666667 0.371333333333333 6.4469743124841 24.5896906641775 -0.135666666666667 0.371333333333333 0.226622261303956 0.00347560916354351 -1.36381758926916 4.93457542110665 Q8TE68 EPS8L1 Q8TE68.S676.p_EPS8L1 Q8TE68_S676s _1_1_676_676 Q8TE68 Q8TE68|B4DKV7|Q8TE68-2 Epidermal growth factor receptor kinase substrate 8-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8680.8680.3 10.78 8.56 99 1 1 1 0 584.6228 1671.8863 S676s TMT10 670 (K) EELRAVsPEEGAR (V) EELRAVS(1.0)PEEGAR s:Phosphorylated S EPS8L1 80534.9 1 15 326.1 361.27 HUMAN 1 -6.447 24.5897 KEEPPPLTPPARCAA-p Q9C0C2;T131-p KEEPPPLTPPARCAA 0.0778192953261892 0.00259686134026793 -0.381666666666667 -0.786 23.7003525111465 39.4809577630472 -0.381666666666667 -0.786 0.00426544895305586 0.000112694889924428 -4.72196925724085 -9.90033381189918 Q9C0C2 TNKS1BP1 Q9C0C2.T131.p_TNKS1BP1 Q9C0C2_T131t _1_1_131_131 Q9C0C2 Q9C0C2|E9PKK0 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16110.16312.5 21.05 14.56 9.138 5 1 1 0 1007.5311 4953.6677 T131t TMT10 95 (K) RPLPFAPRPAVEASTGGEATQETGKEEAGKEEPPPLtPPAR (C) RPLPFAPRPAVEAS(0.0)T(0.0)GGEAT(0.0)QET(0.0)GKEEAGKEEPPPLT(0.99)PPAR K:TMT10,t:Phosphorylated T TNKS1BP1 182819.3 2 3 4.1 2105.7 HUMAN 1 -23.7004 -39.481 KEEPVIVTPPTKQSL-p Q8IX90;T190-p KEEPVIVTPPTKQSL 0.518895843201009 0.0150456428565557 -0.0876666666666667 -0.364 5.26176952087086 25.2117987242935 -0.0876666666666667 -0.364 0.297730308834001 0.00301175838112418 -1.15181964114398 -5.09119492886049 Q8IX90 SKA3 Q8IX90.T190.p_SKA3 Q8IX90_T190t_1_1_190_190 Q8IX90 Q8IX90|Q8IX90-3 Spindle and kinetochore-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27754.27754.5 19.29 17.99 2.779 5 1 1 0 801.4452 3922.2297 N174n T190t TMT10 166 (R) YIVSQVLPnPPQAVNNYKEEPVIVtPPTK (Q) Y(0.0)IVS(0.0)QVLPN(0.99)PPQAVN(0.0)N(0.0)Y(0.0)KEEPVIVT(0.99)PPT(0.0)K K:TMT10,n:Deamidated,t:Phosphorylated T SKA3 46872 5 5 966.1 193.88 HUMAN 1 -5.2618 -25.2118 KEEQLKNSAEEEVLS-p A0A0U1RRH6;S84-p KEEQLKNSAEEEVLS 0.203469268152067 0.0496915219721712 -0.403333333333333 0.243 13.4052860278761 17.436932196679 -0.403333333333333 0.243 0.045653218184173 0.0180429182057429 -2.58436022454057 3.3465616356549 A0A0U1RRH6 NotFound A0A0U1RRH6.S84.p_NotFound A0A0U1RRH6_S84s _1_1_84_84 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17728.17728.5 19.06 13.61 8.573 3 1 1 0 635.3494 3092.7497 S84s TMT10 76 (K) VKEEQLKNsAEEEVLSSEK (Q) VKEEQLKNS(0.99)AEEEVLS(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S PHF14 109152.4 2 2 126.1 543.2 HUMAN 1 -13.4053 17.4369 KEERDDETDEPKPKR-p Q8IX12;T822-p KEERDDETDEPKPKR 0.757201638201782 0.221622949075864 -0.0486666666666667 -0.136333333333333 2.31325003169833 8.61788987430312 -0.0486666666666667 -0.136333333333333 0.587049870831555 0.137470974904314 -0.577107883494225 -1.74162027309044 Q8IX12 CCAR1 Q8IX12.T822.p_CCAR1 Q8IX12_T822t _1_1_822_822 Q8IX12 Q8IX12|Q8IX12-2 Cell division cycle and apoptosis regulator protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5885.5885.5 7.78 7.78 99 1 1 1 0 637.7485 3104.7448 T822t TMT10 813 (K) DKKEERDDEtDEPKPK (R) DKKEERDDET(1.0)DEPKPK K:TMT10,t:Phosphorylated T CCAR1 133503.3 1 6 1111.1 176.02 HUMAN 1 -2.3133 -8.6179 KEERPEGSPTLFKRM-p Q7Z5J4;S1266-p KEERPEGSPTLFKRM 0.230792912299844 0.0302131588935149 -0.215 0.281333333333333 12.2377706322206 20.562145343833 -0.215 0.281333333333333 0.05973418419212 0.00878588401291268 -2.37458083078534 3.99677009193884 Q7Z5J4 RAI1 Q7Z5J4.S1266.p_RAI1 Q7Z5J4_S1266s_1_1_1266_1266 Q7Z5J4 Q7Z5J4|Q7Z5J4-2|A0A1W2PQJ7|Q7Z5J4-3 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11900.12538.4 14.84 13.22 1.282 8 1 1 0 863.4225 3369.7126 N1254n S1266s TMT10 1245 (R) SSSSSNASGnGGDGKEERPEGsPTLFK (R) S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)N(0.0)AS(0.0)GN(0.99)GGDGKEERPEGS(0.99)PT(0.0)LFK K:TMT10,n:Deamidated,s:Phosphorylated S RAI1 206315.3 7 17 142.1 522.21 HUMAN 1 -12.2378 20.5621 KEETGDDSD______-p Q9H6Y2;S382-p KEETGDDSD______ 0.668520665294903 0.0319085374481991 0.0643333333333333 0.445333333333333 3.27103263575122 20.2022073054311 0.0643333333333333 0.445333333333333 0.470865353938208 0.00954507333545529 0.774944410816304 3.91876687107742 Q9H6Y2 WDR55 Q9H6Y2.S382.p_WDR55 Q9H6Y2_S382s _1_1_382_382 Q9H6Y2 Q9H6Y2|G3V1J0|Q9H6Y2-2 WD repeat-containing protein 55 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28788.28991.4 23.59 23.59 2.952 6 1 1 0 1041.9406 4084.7766 S382s TMT10 352 (K) TWSTDDFFAGLREEGEDSMAQEEKEETGDDsD (-) T(0.0)WS(0.0)T(0.0)DDFFAGLREEGEDS(0.0)MAQEEKEET(0.0)GDDS(0.99)D K:TMT10,s:Phosphorylated S WDR55 42582.8 11 2 2434.1 83.56 HUMAN 1 3.271 20.2022 KEETNGPSNQKPVKS-p Q9UKL0;S453-p KEETNGPSNQKPVKS 0.188778224113783 0.0173834041086758 -0.698 0.851333333333333 14.1858141067549 24.256846231753 -0.698 0.851333333333333 0.0381433285997753 0.00375245399774029 -2.72709848984131 4.85216505792982 Q9UKL0 RCOR1 Q9UKL0.S453.p_RCOR1 Q9UKL0_S453s _1_1_453_453 Q9UKL0 Q9UKL0 REST corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10005.10005.5 14.91 14.91 1.236 4 1 1 0 633.9449 3085.7299 S453s TMT10 447 (K) EETNGPsNQKPVKSPDNSIK (M) EET(0.0)NGPS(0.99)NQKPVKS(0.0)PDNS(0.0)IK K:TMT10,s:Phosphorylated S RCOR1 53440.6 2 6 318.1 366.35 HUMAN 1 -14.1858 24.2568 KEEVKEVSIEDTGVD-p Q8WWK9;S534-p KEEVKEVSIEDTGVD 0.204713889706557 0.100598186302928 -0.312333333333333 0.214 13.325683829843 13.1778772192521 -0.312333333333333 0.214 0.046497715619645 0.0481074434561132 -2.56992238515245 2.54175196095694 Q8WWK9 CKAP2 Q8WWK9.S534.p_CKAP2 Q8WWK9_S534s _1_1_534_534 Q8WWK9 Q8WWK9|Q8WWK9-5|Q8WWK9-6 Cytoskeleton-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21041.21041.5 21.37 14.16 1.867 5 1 1 0 919.4771 4513.3914 S534s TMT10 523 (K) SCASKEEVKEVsIEDTGVDVDPEKLEMESK (L) S(0.0)CAS(0.0)KEEVKEVS(0.99)IEDT(0.0)GVDVDPEKLEMES(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CKAP2 77555.9 5 2 2323.1 87.85 HUMAN 1 -13.3257 13.1779 KEEVKKESPTSSSFG-p Q5VUA4;S1267-p KEEVKKESPTSSSFG 0.213972593582082 0.818462065788578 -0.405 -0.03 12.9068839689255 1.21658133298813 -0.405 -0.03 0.0512049095244072 0.755686853035307 -2.49430137481379 -0.327323456447115 Q5VUA4 ZNF318 Q5VUA4.S1267.p_ZNF318 Q5VUA4_S1267s _1_1_1267_1267 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16767.16767.4 13.42 9.82 1.146 5 1 1 0 837.7352 3267.9537 S1267s TMT10 1257 (K) LQLKEEVKKEsPTSSSFGK (F) LQLKEEVKKES(0.99)PT(0.0)S(0.0)S(0.0)S(0.0)FGK K:TMT10,s:Phosphorylated S ZNF318 252762.4 3 20 37.1 870.88 HUMAN 1 -12.9069 -1.2166 KEEVLSESEAENQQA-p Q9UJX5-3;S780-p KEEVLSESEAENQQA 0.574777890570195 0.138254009635805 -0.09 0.165333333333333 4.42383258050349 11.3216993668688 -0.09 0.165333333333333 0.361091064807271 0.0737615549349125 -0.997327032049781 2.21153639689816 Q9UJX5 ANAPC4 Q9UJX5.3.S780.p_ANAPC4 Q9UJX5-3_S780s _1_1_780_780 Q9UJX5-3 Q9UJX5-3 Isoform 3 of Anaphase-promoting complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36317.36317.5 20.43 20.43 1.152 3 1 1 0 1012.7444 4979.7486 S780s TMT10 772 (K) IKEEVLSEsEAENQQAGAAALAPEIVIKVEKLDPELDS (-) IKEEVLS(0.0)ES(0.99)EAENQQAGAAALAPEIVIKVEKLDPELDS(0.0) K:TMT10,s:Phosphorylated S ANAPC4 93012.6 9 3 2151.1 95.72 HUMAN 1 -4.4238 11.3217 KEFAAALTAERIKTP-p Q15910-2;T344-p KEFAAALTAERIKTP 0.328895081583708 0.254618354917776 0.149666666666667 -0.322666666666667 9.02786340656165 7.82603484897831 0.149666666666667 -0.322666666666667 0.125087427000461 0.164966786703298 1.81318636490954 -1.60447016040044 Q15910 EZH2 Q15910.2.T344.p_EZH2 Q15910-2_T344t _1_1_344_344 Q15910-2 Q15910-2|Q15910-4|Q15910-3|Q15910-5 Isoform 2 of Histone-lysine N-methyltransferase EZH2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16357.16357.2 12.04 12.04 99 1 1 1 0 694.3459 1307.7157 T344t TMT10 338 (K) EFAAALtAER (I) EFAAALT(1.0)AER t:Phosphorylated T EZH2 88013.3 1 1 1103.1 177.21 HUMAN 1 9.0279 -7.826 KEFGVERSVRPTDSN-p P46020-2;S972-p KEFGVERSVRPTDSN 0.440361201395823 0.0559183496108055 0.112 -0.418 6.56390871610013 16.6859176488304 0.112 -0.418 0.220601838932827 0.0214490585693451 1.38444034885718 -3.19864574121342 P46020 PHKA1 P46020.2.S972.p_PHKA1 P46020-2_S972s _1_1_972_972 P46020-2 A6NMN0|P46020|P46020-2|A6NIT2|P46020-3 Isoform 2 of Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18410.18410.5 16.21 10.45 13.51 7 1 1 0 830.4374 4068.1878 S972s TMT10 966 (K) EFGVERsVRPTDSNVSPAISIHEIGAVGATKTER (T) EFGVERS(0.99)VRPT(0.0)DS(0.0)NVS(0.0)PAIS(0.0)IHEIGAVGAT(0.0)KT(0.0)ER K:TMT10,s:Phosphorylated S PHKA1 136832.8 1 6 2510.2 80.53 HUMAN 1 6.5639 -16.6859 KEFHLNESGDPSSKS-p Q01105-2;S148-p KEFHLNESGDPSSKS 0.376746768297789 0.0302679073044268 0.136333333333333 0.373 7.83757936744685 20.5479355146934 0.136333333333333 0.373 0.164528850419661 0.00881467792639966 1.60697177750097 3.99367409159729 Q01105 SET Q01105.2.S148.p_SET Q01105-2_S148s _1_1_148_148 Q01105-2 P0DME0|A0A087X027|Q01105|Q01105-2|Q01105-4|A0A0C4DFV9|Q01105-3 Isoform 2 of Protein SET HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12697.12697.2 15.49 12.71 1.973 3 1 1 0 992.9747 1904.9754 S148s TMT10 142 (K) EFHLNEsGDPSSK (S) EFHLNES(0.99)GDPS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SET 32102.4 1 6 1479.1 138.77 HUMAN 1 7.8376 20.5479 KEFLEPDSWETLDQQ-p A0A087WSV8;S332-p KEFLEPDSWETLDQQ 0.295125154480667 0.0109128794856433 -0.267 0.399333333333333 9.98918231546586 27.487354369661 -0.267 0.399333333333333 0.100249396869375 0.00178346488576808 -1.97983110840796 5.69456104982989 A0A087WSV8 NotFound A0A087WSV8.S332.p_NotFound A0A087WSV8_S332s _1_1_332_332 A0A087WSV8 V9HW75|P80303|P80303-2|A0A087WSV8 Nucleobindin 2, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27910.27910.4 23.25 23.25 1.268 4 1 1 0 1111.3189 4362.2839 S332s TMT10 321 (K) ATEKKEFLEPDsWETLDQQQFFTEEELK (E) AT(0.0)EKKEFLEPDS(0.99)WET(0.0)LDQQQFFT(0.0)EEELK K:TMT10,s:Phosphorylated S NUCB2 50340.9 19 2 2755.1 71.7 HUMAN 1 -9.9892 27.4874 KEFRRTRSLHGPCPV-p O95544-2;S64-p KEFRRTRSLHGPCPV 0.505331441375725 0.0481004348080665 -0.091 -0.266 5.47280757593555 17.6222377558361 -0.091 -0.266 0.283608499678004 0.017289252796091 -1.19004035968182 -3.38351591700585 O95544 NADK O95544.2.S64.p_NADK O95544-2_S64s _1_1_64_64 O95544-2 O95544-2 Isoform 2 of NAD kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17709.17709.3 13.63 13.63 8.558 3 1 1 0 679.3532 1956.0777 S64s TMT10 64 (R) sLHGPCPVTTFGPK (A) S(0.99)LHGPCPVT(0.0)T(0.0)FGPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NADK 64253.8 2 3 3994.1 39.49 HUMAN 1 -5.4728 -17.6222 KEFSPFGSITSAKVM-p Q13310-2;S319-p KEFSPFGSITSAKVM 0.17801215785102 0.165553280090956 -0.222 -0.155 14.8253858199796 10.2701537822639 -0.222 -0.155 0.032920120634779 0.09396900358569 -2.84576584295967 -2.02784183081803 Q13310 PABPC4 Q13310.2.S319.p_PABPC4 Q13310-2_S319s _1_1_319_319 Q13310-2 Q13310-3|Q13310-2|B1ANR0 Isoform 2 of Polyadenylate-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25881.25881.2 7.68 7.68 1.229 4 1 1 0 904.9712 1728.9573 S319s TMT10 313 (K) EFSPFGsITSAK (V) EFS(0.0)PFGS(0.99)IT(0.0)S(0.0)AK K:TMT10,s:Phosphorylated S PABPC4 69805.6 2 9 1996.1 103.46 HUMAN 1 -14.8254 -10.2702 KEGAKHFSGLEEAVY-p P50990;S23-p KEGAKHFSGLEEAVY 0.366839973732724 0.64879751889335 -0.132666666666667 0.092 8.08522824201682 2.56279877990905 -0.132666666666667 0.0920000000000001 0.155409361375369 0.554268403505876 -1.64994227981197 0.63004016088501 P50990 CCT8 P50990.S23.p_CCT8 P50990_S23s _1_1_23_23 P50990 P50990 T-complex protein 1 subunit theta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17490.17490.2 16.32 16.32 10.889 2 1 1 0 808.8832 1536.8008 S23s TMT10 21 (K) HFsGLEEAVYR (N) HFS(0.99)GLEEAVY(0.0)R s:Phosphorylated S CCT8 60190.1 2 1 1367.1 149.5 HUMAN 1 -8.0852 2.5628 KEGDKNSSPALKS__-p O60347;S770-p KEGDKNSSPALKS__ 0.336200474871642 0.0611842459637312 -0.151 0.282333333333333 8.82486889738671 16.1558897962536 -0.151 0.282333333333333 0.131072960940885 0.0242332141594236 -1.77804734958714 3.09596618671451 O60347 TBC1D12 O60347.S770.p_TBC1D12 O60347_S770s _1_1_770_770 O60347 O60347 TBC1 domain family member 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7726.7726.3 11.43 9.48 1.424 3 1 1 0 667.3611 1920.1005 S770s TMT10 764 (K) EGDKNSsPALKS (-) EGDKNS(0.0)S(0.99)PALKS(0.0) K:TMT10,s:Phosphorylated S TBC1D12 86422.8 6 5 2018.1 102.13 HUMAN 1 -8.8249 16.1559 KEGDKSQSAEIWEKL-p Q7L4I2;S350-p KEGDKSQSAEIWEKL 0.1560557092084 0.012597660436776 0.236 0.843333333333333 16.2048970053465 26.4961128159235 0.236 0.843333333333333 0.0239612957423196 0.00224072581908447 3.10763214713918 5.42564578083864 Q7L4I2 RSRC2 Q7L4I2.S350.p_RSRC2 Q7L4I2_S350s _1_1_350_350 Q7L4I2 Q7L4I2|Q7L4I2-2 Arginine/serine-rich coiled-coil protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16687.16687.3 9.36 9.36 2.165 2 1 1 0 539.2756 1535.847 S350s TMT10 348 (K) SQsAEIWEK (L) S(0.0)QS(0.99)AEIWEK K:TMT10,s:Phosphorylated S RSRC2 50615.9 1 6 1070.1 180.75 HUMAN 1 16.2049 26.4961 KEGDVDVSDSDDEDD-p Q9NYV6;S170-p KEGDVDVSDSDDEDD 0.757838648247001 0.4327885548442 -0.048 -0.0773333333333333 2.30534329530435 4.8459942233628 -0.048 -0.0773333333333333 0.588119623410726 0.327642761489236 -0.575408803869914 -1.07554696350603 Q9NYV6 RRN3 Q9NYV6.S170.p_RRN3 Q9NYV6_S170sS172s_2_2_170_172 Q9NYV6 Q9NYV6|H3BMT1|F5H148|Q9NYV6-3|Q9NYV6-4|Q9NYV6-2 RNA polymerase I-specific transcription initiation factor RRN3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22224.22224.5 17.35 17.35 7.665 3 2 2 0 782.5474 3748.7649 S170s S172s TMT10 160 (R) VIIKEGDVDVsDsDDEDDNLPANFDTCHR (A) VIIKEGDVDVS(0.99)DS(0.99)DDEDDNLPANFDT(0.0)CHR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RRN3 74904.7 9 3 2705.1 73.33 HUMAN 1 -2.3053 -4.846 KEGEEVYSWSESQDQ-p Q8N201;S1142-p KEGEEVYSWSESQDQ 0.522425681868064 0.0252823022203439 0.112 0.372666666666667 5.21401470334545 21.7371147382825 0.112 0.372666666666667 0.301022202932751 0.00670329799183533 1.1431367266409 4.25763855449983 Q8N201 INTS1 Q8N201.S1142.p_INTS1 Q8N201_S1142s _1_1_1142_1142 Q8N201 Q8N201 Integrator complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21882.21882.3 21.54 21.54 2.428 5 1 1 0 1023.824 2989.4944 S1142s TMT10 1133 (R) QSKEGEEVYsWSESQDQVFLR (W) QS(0.0)KEGEEVY(0.0)S(0.99)WS(0.0)ES(0.0)QDQVFLR K:TMT10,s:Phosphorylated S INTS1 246518.1 5 4 604.1 262.74 HUMAN 1 5.214 21.7371 KEGHWDCSICLVRNE-p P49792;S1422-p KEGHWDCSICLVRNE 0.709639708471683 0.00843649951463868 -0.144666666666667 -0.583666666666667 2.80113460976272 29.4510205944854 -0.144666666666667 -0.583666666666667 0.524670370344743 0.00113474411882776 -0.679722721777468 -6.2571389568678 P49792 RANBP2 P49792.S1422.p_RANBP2 P49792_S1422s _1_1_1422_1422 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14376.14376.4 15.06 15.06 99 1 1 1 0 550.2719 2118.0989 S1422s TMT10 1415 (K) KEGHWDCsICLVR (N) KEGHWDCS(1.0)ICLVR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RANBP2 362585.9 1 25 9.1 1298.62 HUMAN 1 -2.8011 -29.451 KEGKEAGSEPAPEQE-p Q6UN15;S579-p KEGKEAGSEPAPEQE 0.42081761725115 0.36785291790829 0.392 0.165333333333333 6.93431360796364 5.75923419463573 0.392 0.165333333333333 0.202566973378083 0.265507369834602 1.44951018858368 1.24126762852383 Q6UN15 FIP1L1 Q6UN15.S579.p_FIP1L1 Q6UN15_S579s _1_1_579_579 Q6UN15 Q6UN15|Q6UN15-5|Q6UN15-3 Pre-mRNA 3'-end-processing factor FIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9875.9875.3 8.88 8.88 1.49 4 1 1 0 928.0977 2702.3045 S579s TMT10 573 (K) EGKEAGsEPAPEQESTEATPAE (-) EGKEAGS(0.99)EPAPEQES(0.0)T(0.0)EAT(0.0)PAE K:TMT10,s:Phosphorylated S FIP1L1 66639.3 2 12 404.1 326.66 HUMAN 1 6.9343 5.7592 KEGKETGSPKMDAKL-p Q9ULD9;S829-p KEGKETGSPKMDAKL 0.400124584561269 0.00422755426421801 -0.279 0.634666666666667 7.33814496310017 34.9184422276167 -0.279 0.634666666666667 0.184580366376589 0.000322222436479944 -1.52008347173999 8.06423725775984 Q9ULD9 ZNF608 Q9ULD9.S829.p_ZNF608 Q9ULD9_S829s _1_1_829_829 Q9ULD9 Q9ULD9|Q9ULD9-2 Zinc finger protein 608 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7979.7979.3 11.71 7.41 2.048 2 1 1 0 610.9938 1750.9976 S829s TMT10 826 (K) ETGsPKMDAK (L) ET(0.0)GS(0.99)PKMDAK K:TMT10,s:Phosphorylated S ZNF608 163232.5 1 5 1226.1 164.42 HUMAN 1 -7.3381 34.9184 KEGQWDCSACLVQNE-p P49792;S1486-p KEGQWDCSACLVQNE 0.389897464923581 0.00624335102474204 0.39 -0.485666666666667 7.5681805918562 31.7639992327741 0.39 -0.485666666666667 0.175057991283515 0.000666193017913296 1.56014851262271 -6.97538209847124 P49792 RANBP2 P49792.S1486.p_RANBP2 P49792_S1486s _1_1_1486_1486 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16243.16243.3 16.4 16.4 9.213 4 1 1 0 898.7359 2614.2278 S1486s TMT10 1480 (K) EGQWDCsACLVQNEGSSTK (C) EGQWDCS(0.99)ACLVQNEGS(0.0)S(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RANBP2 362585.9 1 27 9.1 1298.62 HUMAN 1 7.5682 -31.764 KEGQWDCSVCLVRNE-p P49792;S1613-p KEGQWDCSVCLVRNE 0.971320196635447 0.0175936501308428 0.006 -0.525 0.246741845120922 24.1845797818069 0.006 -0.525 0.944769393378202 0.00381541710017077 0.0725513456598723 -4.83439747731902 P49792 RANBP2 P49792.S1613.p_RANBP2 P49792_S1613s _1_1_1613_1613 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18219.18219.2 15.82 15.82 99 1 1 1 0 909.3969 1737.825 S1613s TMT10 1607 (K) EGQWDCsVCLVR (N) EGQWDCS(1.0)VCLVR C:Carbamidomethylation,s:Phosphorylated S RANBP2 362585.9 3 31 9.1 1298.62 HUMAN 1 0.2467 -24.1846 KEGSLPHSDDAGDYE-p Q8IY92;S977-p KEGSLPHSDDAGDYE 0.935032636613946 0.0496989323135193 -0.016 0.255 0.571826778920204 17.4347390098794 -0.016 0.255 0.876632004641678 0.0180520321791334 -0.162734689084519 3.34612537093785 Q8IY92 SLX4 Q8IY92.S977.p_SLX4 Q8IY92_S977s _1_1_977_977 Q8IY92 Q8IY92|Q8IY92-2 Structure-specific endonuclease subunit SLX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24183.24183.4 23.68 20.23 2.481 11 1 1 0 1201.5376 4723.1605 S977s TMT10 971 (K) EGSLPHsDDAGDYEQLFSSTQGEISEPSQITSEPEEQSGAVR (E) EGS(0.0)LPHS(0.99)DDAGDY(0.0)EQLFS(0.0)S(0.0)T(0.0)QGEIS(0.0)EPS(0.0)QIT(0.0)S(0.0)EPEEQS(0.0)GAVR s:Phosphorylated S SLX4 201834.1 1 9 218.1 430.83 HUMAN 1 -0.5718 17.4347 KEGTYDGSWALADVM-p B7Z6D5;S67-p KEGTYDGSWALADVM 0.192627910278709 0.149915818117418 -0.328666666666667 0.487 13.9622665945644 10.8447884373601 -0.328666666666667 0.487 0.0401581169856574 0.0823229938848612 -2.68599317953147 2.12799540066649 B7Z6D5 NotFound B7Z6D5.S67.p_NotFound B7Z6D5_S67s _1_1_67_67 B7Z6D5 Q96GQ7|B7Z6D5|A0A087WYH5 Probable ATP-dependent RNA helicase DDX27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.36159.36159.3 18.79 16.97 2.875 4 1 1 0 837.0759 2429.2423 S67s TMT10 61 (K) EGTYDGsWALADVMSQLK (K) EGT(0.0)Y(0.0)DGS(0.99)WALADVMS(0.0)QLK K:TMT10,s:Phosphorylated S DDX27 87002.4 1 4 2685.1 73.99 HUMAN 1 -13.9623 10.8448 KEHAPLASPVENKEV-p Q9ULJ3;S714-p KEHAPLASPVENKEV 0.777764453490353 0.00227464949884667 0.0736666666666667 -0.981 2.09691008288879 40.8136796294847 0.0736666666666668 -0.981 0.617033852791544 8.2914796094819e-05 0.530158097764454 -10.5034699299114 Q9ULJ3 ZBTB21 Q9ULJ3.S714.p_ZBTB21 Q9ULJ3_S714s _1_1_714_714 Q9ULJ3 Q9ULJ3 Zinc finger and BTB domain-containing protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11706.11706.3 16.9 15.39 16.905 2 1 1 0 889.1113 2585.3546 S714s TMT10 708 (K) EHAPLAsPVENKEVYQCR (L) EHAPLAS(0.99)PVENKEVY(0.0)QCR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZBTB21 120636.9 7 6 692.1 242.92 HUMAN 1 2.0969 -40.8137 KEHLRKHTGEKPFEC-p P52739;T351-p KEHLRKHTGEKPFEC 0.751238892477601 0.00757858906980585 0.05 -0.843333333333333 2.36761596126027 30.2956228406729 0.05 -0.843333333333333 0.579746858350931 0.000934195381612424 0.588757400525542 -6.51211786751208 P52739 ZNF131 P52739.T351.p_ZNF131 P52739_T351t _1_1_351_351 P52739 P52739|P52739-2 Zinc finger protein 131 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5830.5830.5 11.6 11.6 99 1 1 1 0 559.4764 2713.3906 T351t TMT10 349 (R) KHtGEKPFECPNCHER (F) KHT(1.0)GEKPFECPNCHER K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ZNF131 72447.7 1 2 4593.1 29.1 HUMAN 1 2.3676 -30.2956 KEHSLQVSPSLEKGA-p O95235;S532-p KEHSLQVSPSLEKGA 0.735962347249235 0.00496189114685024 0.0503333333333333 -0.686666666666667 2.52243316530122 33.609211207966 0.0503333333333333 -0.686666666666667 0.559444081206268 0.000435590981182836 0.621624181364688 -7.59597911579272 O95235 KIF20A O95235.S532.p_KIF20A O95235_S532s _1_1_532_532 O95235 O95235|O95235-2 Kinesin-like protein KIF20A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13224.13224.2 17.27 17.27 1.934 3 1 1 0 946.5005 1812.0267 S532s TMT10 526 (K) EHSLQVsPSLEK (G) EHS(0.0)LQVS(0.99)PS(0.0)LEK K:TMT10,s:Phosphorylated S KIF20A 101303.1 4 8 845.1 213.8 HUMAN 1 2.5224 -33.6092 KEHSSWKSPAKKLSH-p E7EVB6;S294-p KEHSSWKSPAKKLSH 0.438363146909406 0.0580220967772217 0.103666666666667 0.254 6.59521368718213 16.4710599804773 0.103666666666667 0.254 0.219017406164333 0.0225368908819657 1.38995434569538 3.15685692245513 E7EVB6 DTNB E7EVB6.S294.p_DTNB E7EVB6_S294s _1_1_294_294 E7EVB6 E7EVB6|O60941-7|O60941-4|E9PEY4|O60941-2|O60941-5 Dystrobrevin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7731.7731.4 13.27 13.27 1.151 3 1 1 0 481.7627 1844.0633 S294s TMT10 288 (K) EHSSWKsPAK (K) EHS(0.0)S(0.0)WKS(0.99)PAK K:TMT10,s:Phosphorylated S DTNB 71367.3 2 1 792.3 224.62 HUMAN 1 6.5952 16.4711 KEIAIVHSDAEKEQE-p Q9H307;S347-p KEIAIVHSDAEKEQE 0.177638949811652 0.00778808550426966 -0.66 0.806 14.8760168011441 30.0896257876213 -0.66 0.806 0.0325385592988887 0.000979574387371997 -2.8552302038347 6.44917623897642 Q9H307 PNN Q9H307.S347.p_PNN Q9H307_S347s _1_1_347_347 Q9H307 Q9H307|Q9H307-2 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16535.16535.5 23.12 21.71 99 1 1 1 0 797.2094 3902.0511 S347s TMT10 341 (K) EIAIVHsDAEKEQEEEEQKQEMEVK (M) EIAIVHS(1.0)DAEKEQEEEEQKQEMEVK K:TMT10,s:Phosphorylated S PNN 81726.4 5 4 180.1 480.36 HUMAN 1 -14.876 30.0896 KEIEAIESDSFVQQT-p Q96IZ7;S237-p KEIEAIESDSFVQQT 0.656070561836029 0.449564659933147 0.0616666666666667 0.0736666666666667 3.43469731655536 4.62787301772546 0.0616666666666667 0.0736666666666667 0.453450900137169 0.344518619432838 0.807402069748867 1.03520382092022 Q96IZ7 RSRC1 Q96IZ7.S237.p_RSRC1 Q96IZ7_S237s _1_1_237_237 Q96IZ7 Q96IZ7|C9J713|Q96IZ7-2 Serine/Arginine-related protein 53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26451.26451.3 18.78 18.78 1.126 3 1 1 0 736.6852 2128.076 S237s TMT10 231 (K) EIEAIEsDSFVQQTFR (S) EIEAIES(0.99)DS(0.0)FVQQT(0.0)FR s:Phosphorylated S RSRC1 38676.4 4 6 2282.1 89.79 HUMAN 1 3.4347 4.6279 KEIKKVATPKKASKP-p P07305;T119-p KEIKKVATPKKASKP 0.425266233604415 0.000952253650599092 0.138 -1.31133333333333 6.84176386387997 53.4490437635 0.138 -1.31133333333333 0.206930074263644 4.51955445689443e-06 1.43328538540726 -18.2113016080101 P07305 H1F0 P07305.T119.p_H1F0 P07305_T119t _1_1_119_119 P07305 P07305|P07305-2 Histone H1.0 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6817.6817.3 7.4 1.5 99 1 1 1 0 590.0472 1688.1604 T119t TMT10 116 (K) KVAtPKK (A) KVAT(1.0)PKK K:TMT10,t:Phosphorylated T H1F0 20862.5 2 4 2948.1 64.98 HUMAN 1 6.8418 -53.449 KEIKRKLSEMQDLEE-p Q66GS9;S356-p KEIKRKLSEMQDLEE 0.965204968504969 0.00924978466338009 -0.00700000000000001 0.744333333333333 0.295793278109853 28.7327449734449 -0.00700000000000001 0.744333333333334 0.934158720142188 0.00133883020763394 -0.0865275218035739 6.04657926180115 Q66GS9 CEP135 Q66GS9.S356.p_CEP135 Q66GS9_S356s _1_1_356_356 Q66GS9 Q66GS9 Centrosomal protein of 135 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21037.21037.4 18.23 14.43 9.422 2 1 1 0 644.8417 2496.3769 S356s TMT10 353 (K) RKLsEMQDLEETMAK (L) RKLS(0.99)EMQDLEET(0.0)MAK K:TMT10,s:Phosphorylated S CEP135 133944.3 4 3 2135.1 96.32 HUMAN 1 -0.2958 28.7327 KEKAQPSSSEDELDN-p Q5T5U3;S1431-p KEKAQPSSSEDELDN 0.352645276788012 0.675540445549461 0.177833333333333 -0.047 8.40676355692932 2.32791392243171 0.177833333333333 -0.047 0.144319044318537 0.585071047997413 1.70566035470948 -0.580184128523656 Q5T5U3 ARHGAP21 Q5T5U3.S1431.p_ARHGAP21 Q5T5U3_S1431sS1432s_2_2_1431_1432 Q5T5U3 Q5T5U3|A0A087WW76 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27399.27399.4 14.81 14.81 1.148 3 2 2 0 697.8411 2628.4124 S1431s S1432s TMT10 1427 (K) AQPSssEDELDNVFFKK (E) AQPS(0.0)S(0.99)S(0.99)EDELDNVFFKK K:TMT10,s:Phosphorylated S ARHGAP21 218696.3 5 29 148.1 512.52 HUMAN 2 8.4068 -2.3279 KEKDLLPSPAGPVPS-p Q9UHB7;S814-p KEKDLLPSPAGPVPS 0.613710831927396 0.0149355055130316 -0.0776666666666667 0.367666666666667 3.93290345525229 25.2699702722805 -0.0776666666666667 0.367666666666667 0.404305504788388 0.00297168637304107 -0.904282144662365 5.10601567708062 Q9UHB7 AFF4 Q9UHB7.S814.p_AFF4 Q9UHB7_S814s _1_1_814_814 Q9UHB7 Q9UHB7|Q9UHB7-2 AF4/FMR2 family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18402.18402.4 19.62 15.59 8.393 2 1 1 0 718.6666 2791.6739 S814s TMT10 808 (K) EKDLLPsPAGPVPSKDPK (T) EKDLLPS(0.99)PAGPVPS(0.0)KDPK K:TMT10,s:Phosphorylated S AFF4 127856.3 8 18 137.1 525.98 HUMAN 1 -3.9329 25.27 KEKEDNSSEEEEEIE-p Q4LE39;S296-p KEKEDNSSEEEEEIE 0.80284168800204 0.128296474883326 -0.0533333333333333 0.322333333333333 1.83682406272349 11.758889981385 -0.0533333333333334 0.322333333333333 0.655115075803928 0.0666977220959055 -0.472354456106757 2.28852501615793 Q4LE39 ARID4B Q4LE39.S296.p_ARID4B Q4LE39_S295sS296s_2_2_295_296 Q4LE39 Q4LE39|Q4LE39-2|Q4LE39-3 AT-rich interactive domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28685.28685.4 11.22 11.22 11.223 3 2 2 0 1116.2733 4302.1181 S295s S296s TMT10 290 (K) EKEDNssEEEEEIEPFPEERENFLQQLYK (F) EKEDNS(0.99)S(0.99)EEEEEIEPFPEERENFLQQLY(0.0)K K:TMT10,s:Phosphorylated S ARID4B 148890.9 2 19 191.1 463.89 HUMAN 1 -1.8368 11.7589 KEKEEKESEDKPEIE-p P07900;S252-p KEKEEKESEDKPEIE 0.375876087847812 0.708192654892653 -0.183333333333333 0.076 7.85825136587391 2.06054902096957 -0.183333333333333 0.076 0.163747569846963 0.622221620961908 -1.61056102925007 0.522108389338276 P07900 HSP90AA1 P07900.S252.p_HSP90AA1 P07900_S252s _1_1_252_252 P07900 P07900-2 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11386.11386.5 13.39 11.14 1.572 2 1 1 0 818.8215 4010.095 S252s Hydrogen 251 (K) EsEDKPEIEDVGSDEEEEKKDGDKK (K) ES(0.99)EDKPEIEDVGS(0.0)DEEEEKKDGDKK K:TMT10-Lys-Only,s:Phosphorylated S HSP90AA1 85057.6 2 5 43.1 810.87 HUMAN 1 -7.8583 2.0605 KEKEMKKSPTSLKRE-p Q9NYZ3;S138-p KEKEMKKSPTSLKRE 0.271400368753456 0.072907361558901 -0.439 -0.469666666666667 10.7327788405674 15.1057432911552 -0.439 -0.469666666666667 0.0844738165061523 0.0308621139813615 -2.10935757475936 -2.89640065522844 Q9NYZ3 GTSE1 Q9NYZ3.S138.p_GTSE1 Q9NYZ3_S138s _1_1_138_138 Q9NYZ3 Q9NYZ3 G2 and S phase-expressed protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7227.7227.3 7.59 1.05 7.586 3 1 1 0 562.0089 1604.0462 S138s TMT10 137 (K) KsPTSLKR (E) KS(0.99)PT(0.0)S(0.0)LKR K:TMT10,s:Phosphorylated S GTSE1 77156.9 2 2 271.1 394.28 HUMAN 1 -10.7328 -15.1057 KEKETAKS_______-p P45973;S191-p KEKETAKS_______ 0.118229246118795 0.00795310374113602 1.98533333333333 -1.74333333333333 19.3035984954578 29.9447762346072 1.98533333333333 -1.74333333333333 0.0117392445659173 0.00101279693070358 3.73106335538167 -6.40521112641933 P45973 CBX5 P45973.S191.p_CBX5 P45973_S191s _1_1_191_191 P45973 P45973 Chromobox protein homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14782.14782.4 13.58 12.29 1.191 4 1 1 0 836.6902 3263.7718 S191s TMT10 172 (R) LTWHAYPEDAENKEKETAKs (-) LT(0.0)WHAY(0.0)PEDAENKEKET(0.0)AKS(0.99) K:TMT10,s:Phosphorylated S CBX5 22395.7 2 6 1801.1 114.16 HUMAN 1 19.3036 -29.9448 KEKFLEQSMDIEDLK-p O95239;S1038-p KEKFLEQSMDIEDLK 0.277415540108001 0.567307286369336 -0.411333333333333 -0.176666666666667 10.5343036020828 3.31922341973779 -0.411333333333333 -0.176666666666667 0.0884238946915482 0.465669354377992 -2.0747097469829 -0.784419786219109 O95239 KIF4A O95239.S1038.p_KIF4A O95239_S1038s _1_1_1038_1038 O95239 Q2VIQ3|O95239 Chromosome-associated kinesin KIF4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29183.29183.3 12.55 10.16 99 1 1 1 0 669.3366 1926.0294 S1038s TMT10 1034 (K) FLEQsMDIEDLK (Y) FLEQS(1.0)MDIEDLK K:TMT10,s:Phosphorylated S KIF4A 141476.1 1 11 516.1 285.41 HUMAN 1 -10.5343 -3.3192 KEKGKISSLVKDASV-p Q96A65;S220-p KEKGKISSLVKDASV 0.105961047054891 0.074145857917284 -0.432666666666667 -0.31 20.5224657543912 14.9963836557068 -0.432666666666667 -0.31 0.00886652462476547 0.0316491196658146 -3.99198516576047 -2.87589686397929 Q96A65 EXOC4 Q96A65.S220.p_EXOC4 Q96A65_S220s _1_1_220_220 Q96A65 Q96A65|Q96A65-2 Exocyst complex component 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15645.15645.3 10.01 10.01 1.329 2 1 1 0 533.6668 1519.0186 S220s TMT10 216 (K) GKISsLVK (D) GKIS(0.0)S(0.99)LVK K:TMT10,s:Phosphorylated S EXOC4 111237.8 2 4 1685.1 121.05 HUMAN 1 -20.5225 -14.9964 KEKKERRTPSDDEED-p Q641Q2;T331-p KEKKERRTPSDDEED 0.62471869465399 0.546013654745977 -0.0746666666666667 -0.109666666666667 3.79802353274758 3.53512869338777 -0.0746666666666667 -0.109666666666667 0.417059143237513 0.443085084466277 -0.878319243131297 -0.827027717731933 Q641Q2 FAM21A Q641Q2.T331.p_FAM21A Q641Q2_T331tS333s_2_2_331_333 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2|Q9Y4E1-4|Q9Y4E1-2|E7ESD2|Q9Y4E1-6|Q9Y4E1-3|J3KP36|F8W7U3 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.29549.29549.5 14.59 12.04 4.547 6 2 2 0 984.6686 4759.3731 T331t S333s TMT10 328 (K) ERRtPsDDEEDNLFAPPKLTDEDFSPFGSGGGLFSGGK (G) ERRT(0.99)PS(0.99)DDEEDNLFAPPKLT(0.0)DEDFS(0.0)PFGS(0.0)GGGLFS(0.0)GGK K:TMT10,t:Phosphorylated T,s:Phosphorylated S WASHC2A 147352.2 12 69 12.1 1178.3 HUMAN 1 -3.798 -3.5351 KEKKKKESILDLSKY-p Q9UK45;S11-p KEKKKKESILDLSKY 0.0608497647854506 0.546515516205428 -0.415666666666667 -0.0583333333333333 26.5669830345178 3.52920453914488 -0.415666666666667 -0.0583333333333333 0.00220445732802919 0.443689903455637 -5.45191010744937 -0.825866124905236 Q9UK45 LSM7 Q9UK45.S11.p_LSM7 Q9UK45_S11s _1_1_11_11 Q9UK45 Q9UK45|K7ENY5 U6 snRNA-associated Sm-like protein LSm7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16654.16654.3 12.55 12.55 4.106 2 1 1 0 719.7753 2077.3402 S11s TMT10 8 (K) KKEsILDLSK (Y) KKES(0.99)ILDLS(0.0)K K:TMT10,s:Phosphorylated S LSM7 11716.3 1 1 5370.1 20.01 HUMAN 1 -26.567 -3.5292 KEKKKKKSIDPDSIQ-p A3KN83;S794-p KEKKKKKSIDPDSIQ 0.406645824898444 0.0374975895591591 -0.226666666666667 0.267666666666667 7.21813045877542 19.1603194865049 -0.226666666666667 0.267666666666667 0.189752258672235 0.0121329959142063 -1.49914437133926 3.69774190096303 A3KN83 SBNO1 A3KN83.S794.p_SBNO1 A3KN83_S794s _1_1_794_794 A3KN83 A3KN83|A3KN83-2|A3KN83-3 Protein strawberry notch homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.33640.33640.3 20.54 20.54 2.571 5 1 1 0 799.7611 2317.3015 S794s TMT10 794 (K) sIDPDSIQSALLASGLGSK (R) S(0.99)IDPDS(0.0)IQS(0.0)ALLAS(0.0)GLGS(0.0)K K:TMT10,s:Phosphorylated S SBNO1 154994.1 3 4 861.1 210.54 HUMAN 1 -7.2181 19.1603 KEKKPIKSPSKDASS-p Q13523;S328-p KEKKPIKSPSKDASS 0.514684329842857 0.212484650470717 0.113333333333333 0.187333333333333 5.32613809048704 8.84978291740424 0.113333333333333 0.187333333333333 0.293350066464888 0.130323191902146 1.16350295081665 1.78173065285232 Q13523 PRPF4B Q13523.S328.p_PRPF4B Q13523_S328s _1_1_328_328 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7733.7733.3 9.09 9.09 1.283 2 1 1 0 789.8298 2287.5086 S328s TMT10 322 (K) EKKPIKsPSK (D) EKKPIKS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S PRPF4B 117327.1 13 14 70.1 666.55 HUMAN 1 5.3261 8.8498 KEKKRSKTPPKSYST-p Q05519-2;T325-p KEKKRSKTPPKSYST 0.133326246106049 0.0420776749281329 1.197 -0.865666666666667 18.0273588851019 18.4387757060918 1.197 -0.865666666666667 0.0157494035622831 0.0143259169581362 3.46780430919127 -3.54862090985679 Q05519 SRSF11 Q05519.2.T325.p_SRSF11 Q05519-2_T325t _1_1_325_325 Q05519-2 Q05519|Q05519-2|Q5T757 Isoform 2 of Serine/arginine-rich splicing factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4778.4778.5 11.23 5.03 1.314 6 1 1 0 450.0585 2166.2962 T325t TMT10 323 (R) SKtPPKSYSTARR (S) S(0.0)KT(0.99)PPKS(0.0)Y(0.0)S(0.0)T(0.0)ARR K:TMT10,t:Phosphorylated T SRSF11 53527.2 10 4 185.1 475.04 HUMAN 1 18.0274 -18.4388 KEKKSLDSDESEDEE-p Q13442;S60-p KEKKSLDSDESEDEE 0.12069597861379 0.00590388514214645 0.369666666666667 0.66 19.0875056203626 32.2063606465348 0.369666666666667 0.66 0.0123381327305243 0.000601677727468571 3.68579802070692 7.12014017066345 Q13442 PDAP1 Q13442.S60.p_PDAP1 Q13442_S60s _1_1_60_60 Q13442 Q13442 28 kDa heat- and acid-stable phosphoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9373.9373.4 16.76 16.76 1.942 4 1 1 0 771.6125 3003.4634 S60s TMT10 56 (K) KSLDsDESEDEEDDYQQKR (K) KS(0.0)LDS(0.99)DES(0.0)EDEEDDY(0.0)QQKR K:TMT10,s:Phosphorylated S PDAP1 20629.7 5 2 1837.1 111.85 HUMAN 1 19.0875 32.2064 KEKLRKRTEEPDRDE-p O95232;T238-p KEKLRKRTEEPDRDE 0.853515833697351 0.563905207274604 0.0976666666666667 -0.295 1.33298737704192 3.35327991704884 0.0976666666666667 -0.295 0.735700857599605 0.462031949761638 0.355438306379292 -0.791179004249113 O95232 LUC7L3 O95232.T238.p_LUC7L3 O95232_T238t _1_1_238_238 O95232 J3KPP4|O95232 Luc7-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3940.3940.5 12.98 7.95 99 1 1 1 0 442.8408 2130.2031 T238t Hydrogen 236 (R) KRtEEPDRDERLK (K) KRT(1.0)EEPDRDERLK K:TMT10-Lys-Only,t:Phosphorylated T LUC7L3 51864.7 2 5 1151.1 172.09 HUMAN 1 1.333 -3.3533 KEKMMNDSILRLQTW-p O95786;S764-p KEKMMNDSILRLQTW 0.872258828483717 0.00206169887232344 -0.0316666666666667 -0.875333333333333 1.16140466141715 41.8114924400138 -0.0316666666666667 -0.875333333333334 0.765349026026258 6.5894741102185e-05 -0.313889049386747 -10.9769301349432 O95786 DDX58 O95786.S764.p_DDX58 O95786_S764s_1_1_764_764 O95786 O95786 Probable ATP-dependent RNA helicase DDX58 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9898.9898.3 9.72 2.64 1.106 2 1 1 0 976.1663 2830.5232 M761m S764s TMT10 751 (K) EQINMYKEKMmNDsILR (L) EQINM(0.0)Y(0.0)KEKM(0.0)M(0.99)NDS(0.99)ILR K:TMT10,m:Oxidized methionine,s:Phosphorylated S DDX58 108081.1 1 2 5236.1 21.47 HUMAN 1 -1.1614 -41.8115 KEKRDILSFDKIKEQ-p Q14151;S613-p KEKRDILSFDKIKEQ 0.159218097216071 0.0456456030216325 -0.353 0.338666666666667 15.9850729443195 17.9406906771177 -0.353 0.338666666666667 0.025205348442536 0.0160668571458225 -3.06532465803762 3.447461544084 Q14151 SAFB2 Q14151.S613.p_SAFB2 Q14151_S613s _1_1_613_613 Q14151 Q14151 Scaffold attachment factor B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24392.24392.2 10.01 1.62 99 1 1 1 0 688.3671 1295.7611 S613s TMT10 610 (R) DILsFDK (I) DILS(1.0)FDK K:TMT10,s:Phosphorylated S SAFB2 107985.1 2 10 83.3 629.62 HUMAN 1 -15.9851 17.9407 KEKSKSPSPPRLTED-p Q9UKV3;S388-p KEKSKSPSPPRLTED 0.639890870583579 0.0591148794902953 0.0713333333333333 0.230333333333333 3.62230040213251 16.3637329656625 0.0713333333333333 0.230333333333333 0.434280130626589 0.0231007831542666 0.84420643921519 3.13606742962622 Q9UKV3 ACIN1 Q9UKV3.S388.p_ACIN1 Q9UKV3_S388s _1_1_388_388 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8406.8406.3 8.84 3.63 2.115 4 1 1 0 670.0257 1928.0965 S388s TMT10 384 (K) SKSPsPPRLTEDR (K) S(0.0)KS(0.0)PS(0.99)PPRLT(0.0)EDR K:TMT10,s:Phosphorylated S ACIN1 152258.2 9 10 32.2 899.18 HUMAN 1 3.6223 16.3637 KEKSTADSGGEGLET-p Q8NFC6;S266-p KEKSTADSGGEGLET 0.548049797648108 0.230776669890078 -0.0856666666666667 0.123666666666667 4.81948296146602 8.38762287715396 -0.0856666666666667 0.123666666666667 0.329648955380951 0.144956505988372 -1.07087117823903 1.70177799960969 Q8NFC6 BOD1L1 Q8NFC6.S266.p_BOD1L1 Q8NFC6_S266s _1_1_266_266 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25350.25350.4 20.62 17.11 1.199 6 1 1 0 987.4818 3866.9461 S266s TMT10 262 (K) STADsGGEGLETAPKSEEFSDLPCPVEEIK (N) S(0.0)T(0.0)ADS(0.99)GGEGLET(0.0)APKS(0.0)EEFS(0.0)DLPCPVEEIK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BOD1L1 332628.7 4 1 97.1 603.4 HUMAN 1 -4.8195 8.3876 KEKTDDTSGEDNDEK-p Q9Y618;S554-p KEKTDDTSGEDNDEK 0.131504655206906 0.0291724794773081 0.267333333333333 -0.306666666666667 18.2072007360363 20.777953360566 0.267333333333333 -0.306666666666667 0.015110537966415 0.00835996894089407 3.50432072218759 -4.04395914164066 Q9Y618 NCOR2 Q9Y618.S554.p_NCOR2 Q9Y618_T553tS554s_2_2_553_554 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11242.11242.3 12.64 12.64 2.719 4 2 2 0 1082.1831 3084.5991 T553t S554s TMT10 548 (K) EKTDDtsGEDNDEKEAVASK (G) EKT(0.0)DDT(0.99)S(0.99)GEDNDEKEAVAS(0.0)K K:TMT10,t:Phosphorylated T,s:Phosphorylated S NCOR2 275540.8 4 43 16.1 1053.89 HUMAN 1 18.2072 -20.778 KEKTISVSSSKSGPV-p Q8N3X1-2;S289-p KEKTISVSSSKSGPV 0.177928026787036 0.080441220538146 0.317 -0.210333333333333 14.8503312651036 14.5196342283528 0.317 -0.210333333333333 0.0327315727392898 0.0353212916849631 2.85042752764902 -2.78708656928247 Q8N3X1 FNBP4 Q8N3X1.2.S289.p_FNBP4 Q8N3X1-2_S289s _1_1_289_289 Q8N3X1-2 Q8N3X1-2 Isoform 2 of Formin-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11898.11898.2 8.66 3.48 1.126 5 1 1 0 673.8716 1266.7669 S289s TMT10 285 (K) TISVsSSK (S) T(0.0)IS(0.0)VS(0.99)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S FNBP4 110905.5 1 5 405.1 325.34 HUMAN 1 14.8503 -14.5196 KEKTKPLTPSIGAKE-p Q14004-2;T588-p KEKTKPLTPSIGAKE 0.89801806103268 0.080556827652968 0.0186666666666667 0.232 0.915398470134846 14.5092829953134 0.0186666666666667 0.232 0.80995362410329 0.0354055789605474 0.252520285444608 2.78516843325916 Q14004 CDK13 Q14004.2.T588.p_CDK13 Q14004-2_T588t _1_1_588_588 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14373.14373.3 12.81 7.11 1.337 3 1 1 0 627.3802 1800.1562 T588t TMT10 584 (K) TKPLtPSIGAK (E) T(0.0)KPLT(0.99)PS(0.0)IGAK K:TMT10,t:Phosphorylated T CDK13 159173.6 4 10 145.1 520.12 HUMAN 1 0.9154 14.5093 KEKTPATTPEARVLG-p Q8NI27;T1289-p KEKTPATTPEARVLG 0.327502737509373 0.00714231278100688 -0.16 -0.525333333333333 9.06790790250473 30.7287779296074 -0.16 -0.525333333333333 0.12393934874078 0.00084551673342379 -1.82011885134212 -6.64608415000456 Q8NI27 THOC2 Q8NI27.T1289.p_THOC2 Q8NI27_T1289t _1_1_1289_1289 Q8NI27 Q8NI27|A0A0C4DG98|Q8NI27-2 THO complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4894.4894.3 8.29 8.29 1.106 3 1 1 0 580.3095 1658.9478 T1289t TMT10 1283 (K) EKTPATtPEAR (V) EKT(0.0)PAT(0.0)T(0.99)PEAR K:TMT10,t:Phosphorylated T THOC2 184654.1 4 6 512.1 287.1 HUMAN 1 -9.0679 -30.7288 KELAPAVSVLQLFCS-p Q9Y678;S290-p KELAPAVSVLQLFCS 0.43773303002828 0.0385353871835953 0.125333333333333 0.425 6.60654316529536 18.9967449572702 0.125333333333333 0.425 0.218446798141002 0.0125986933170055 1.39194919087852 3.66366133436387 Q9Y678 COPG1 Q9Y678.S290.p_COPG1 Q9Y678_S290s _1_1_290_290 Q9Y678 Q9Y678|Q9UBF2|Q9UBF2-2 Coatomer subunit gamma-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36533.36533.3 21.78 19.44 4.976 3 1 1 0 795.4297 2304.3038 S290s TMT10 284 (K) ELAPAVsVLQLFCSSPK (A) ELAPAVS(0.99)VLQLFCS(0.0)S(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S COPG1 99028.8 1 4 1422.1 144.09 HUMAN 1 6.6065 18.9967 KELARQISFKAEVNS-p Q9Y385;S184-p KELARQISFKAEVNS 0.687777093309933 0.251757745739687 0.059 -0.14 3.0533479841468 7.88815896294345 0.059 -0.14 0.4950683945243 0.162623799543332 0.731227200762278 -1.61524857158802 Q9Y385 UBE2J1 Q9Y385.S184.p_UBE2J1 Q9Y385_S184s_1_1_184_184 Q9Y385 Q9Y385 Ubiquitin-conjugating enzyme E2 J1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20101.20101.3 17.06 17.06 11.406 3 1 1 0 639.337 1853.0533 Q182q S184s Hydrogen 182 (R) qIsFKAEVNSSGK (T) Q(1.0)IS(0.99)FKAEVNS(0.0)S(0.0)GK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S UBE2J1 35426.2 4 1 3848.1 41.74 HUMAN 1 3.0533 -7.8882 KELASPVSPELRQKE-p Q5T4S7-2;S181-p KELASPVSPELRQKE 0.507928702582217 0.0816277284164429 -0.115 0.197333333333333 5.42823564170812 14.4240557949287 -0.115 0.197333333333333 0.2865341802974 0.0361072506279234 -1.18198785902718 2.76939135042231 Q5T4S7 UBR4 Q5T4S7.2.S181.p_UBR4 Q5T4S7-2_S181s _1_1_181_181 Q5T4S7-2 Q5T4S7-2|Q5T4S7-4|Q5T4S7-3|Q5T4S7-5 Isoform 2 of E3 ubiquitin-protein ligase UBR4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17528.17528.3 13.45 13.45 3.397 2 1 1 0 502.9297 1426.8103 S181s TMT10 175 (K) ELASPVsPELR (Q) ELAS(0.0)PVS(0.99)PELR s:Phosphorylated S UBR4 583136.9 3 3 528.1 281.83 HUMAN 1 -5.4282 14.4241 KELDHNISKHKREAE-p O95347;S918-p KELDHNISKHKREAE 0.916594372848654 0.0101822081311097 0.0173333333333333 0.403333333333333 0.737883406357581 27.9828378601525 0.0173333333333333 0.403333333333333 0.843745868681671 0.0015911686517257 0.206772000051979 5.83267664296079 O95347 SMC2 O95347.S918.p_SMC2 O95347_S918s _1_1_918_918 O95347 O95347 Structural maintenance of chromosomes protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8991.8991.3 8.88 4.06 99 1 1 1 0 498.5974 1413.8102 S918s TMT10 912 (K) ELDHNIsK (H) ELDHNIS(1.0)K K:TMT10,s:Phosphorylated S SMC2 136167.1 1 5 2559.1 78.57 HUMAN 1 0.7379 27.9828 KELEDLLSPLEELVK-p P37198;S408-p KELEDLLSPLEELVK 0.33578647117642 0.725650934385914 -0.139333333333333 0.0346666666666667 8.84100944188687 1.91669115897878 -0.139333333333333 0.0346666666666667 0.130586732673719 0.643177560470731 -1.78084124172436 0.49021656997447 P37198 NUP62 P37198.S408.p_NUP62 P37198_S408s _1_1_408_408 P37198 P37198|M0QXN5 Nuclear pore glycoprotein p62 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.37400.37400.2 18.13 10.71 99 1 1 1 0 1083.0933 2085.2095 S408s TMT10 402 (K) ELEDLLsPLEELVK (E) ELEDLLS(1.0)PLEELVK K:TMT10,s:Phosphorylated S NUP62 53425.1 4 2 3967.1 40.03 HUMAN 1 -8.841 1.9167 KELEEKMSQARQICP-p Q96SB8-2;S874-p KELEEKMSQARQICP 0.673156700289378 0.0686701132150076 0.079 0.308666666666667 3.22063490480026 15.4710616551782 0.079 0.308666666666667 0.476361341386587 0.0283722536933953 0.764880285684786 2.96526499495628 Q96SB8 SMC6 Q96SB8.2.S874.p_SMC6 Q96SB8-2_S874s _1_1_874_874 Q96SB8-2 Q96SB8-2 Isoform 2 of Structural maintenance of chromosomes protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10793.10793.3 10.61 2.61 99 1 1 1 0 586.9679 1678.9198 S874s TMT10 868 (K) ELEEKMsQAR (Q) ELEEKMS(1.0)QAR K:TMT10,s:Phosphorylated S SMC6 130178.6 1 4 3775.1 43.35 HUMAN 1 3.2206 15.4711 KELEENDSENSEFED-p O43719;S597-p KELEENDSENSEFED 0.218730142557004 0.00297589273654222 -0.492333333333333 0.755666666666667 12.7229314240744 38.0444747096549 -0.492333333333333 0.755666666666667 0.0534203658040185 0.000156874563002422 -2.46125845554524 9.28564650924974 O43719 HTATSF1 O43719.S597.p_HTATSF1 O43719_S597sS600s_2_2_597_600 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20720.20720.5 19.89 19.89 6.854 3 2 2 0 826.1714 3966.8819 S597s S600s TMT10 582 (K) ELHENVLDKELEENDsENsEFEDDGSEK (V) ELHENVLDKELEENDS(0.99)ENS(0.99)EFEDDGS(0.0)EK K:TMT10,s:Phosphorylated S HTATSF1 86421.8 8 19 149.1 512 HUMAN 1 -12.7229 38.0445 KELEGEESEPQEMDI-p O14647;S988-p KELEGEESEPQEMDI 0.89894761254326 0.150277269319722 0.0206666666666667 0.243 0.904157133432729 10.8297262056921 0.0206666666666667 0.243 0.812052834583124 0.0826090027516776 0.249661396073036 2.12536364564987 O14647 CHD2 O14647.S988.p_CHD2 O14647_S988s _1_1_988_988 O14647 O14647|O14647-2 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28428.28428.3 9.98 9.98 99 1 1 1 0 857.3865 2490.1755 S988s TMT10 982 (K) ELEGEEsEPQEMDIDEILR (L) ELEGEES(1.0)EPQEMDIDEILR s:Phosphorylated S CHD2 212309.6 1 4 482.1 298.11 HUMAN 1 0.9042 10.8297 KELEKRASGQAFELI-p P16949;S16-p KELEKRASGQAFELI 0.107015162488299 0.0311293173996177 -0.296666666666667 -0.282 20.4235357108281 20.3575758556403 -0.296666666666667 -0.282 0.00907081749287058 0.00920963491588839 -3.97044104162402 -3.95233064910783 P16949 STMN1 P16949.S16.p_STMN1 P16949_S16s _1_1_16_16 P16949 P16949-2 Stathmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21860.21860.3 17.56 17.56 17.564 2 1 1 0 618.6662 1774.0173 S16s TMT10 14 (K) RAsGQAFELILSPR (S) RAS(0.99)GQAFELILS(0.0)PR s:Phosphorylated S STMN1 17302.2 25 2 690.1 243.18 HUMAN 1 -20.4235 -20.3576 KELERKLSDLEKKME-p P30622;S1009-p KELERKLSDLEKKME 0.201694340984261 0.191764256097797 -0.194 0.147666666666667 13.507548204899 9.43143921631235 -0.194 0.147666666666667 0.0445907913186792 0.113987198073311 -2.60293925947479 1.88236444286355 P30622 CLIP1 P30622.S1009.p_CLIP1 P30622_S1009s _1_1_1009_1009 P30622 P30622|P30622-1|P30622-2|J3KP58|F5H0N7 CAP-Gly domain-containing linker protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14408.14408.3 7.73 1.98 99 1 1 1 0 533.9832 1519.9663 S1009s TMT10 1007 (R) KLsDLEK (K) KLS(1.0)DLEK K:TMT10,s:Phosphorylated S CLIP1 162985.2 1 12 372.1 339.16 HUMAN 1 -13.5075 9.4314 KELESHSSWYAPEAL-p G0XQ39;S340-p KELESHSSWYAPEAL 0.286432674786105 0.912301055796912 0.154 0.0113333333333333 10.2460371527429 0.558214626695091 0.154 0.0113333333333333 0.0944922705436186 0.879383954986395 2.02448980740255 0.159052881612092 G0XQ39 STIM1 G0XQ39.S340.p_STIM1 G0XQ39_S340s _1_1_340_340 G0XQ39 G0XQ39|Q13586 STIM1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19957.19957.3 15.47 15.47 1.37 4 1 1 0 805.0711 2333.2178 S340s TMT10 334 (K) ELESHSsWYAPEALQK (W) ELES(0.0)HS(0.0)S(0.99)WY(0.0)APEALQK K:TMT10,s:Phosphorylated S STIM1 88986.4 1 2 771.1 227.77 HUMAN 1 10.246 0.5582 KELESPLTPGKVCRA-p O15014;T746-p KELESPLTPGKVCRA 0.493244932125733 0.00565527835749015 0.134666666666667 -0.622333333333333 5.65183759492542 32.5721384902186 0.134666666666667 -0.622333333333333 0.272154951730494 0.000553077703612379 1.22228355114364 -7.24172091023278 O15014 ZNF609 O15014.T746.p_ZNF609 O15014_T746t _1_1_746_746 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16939.16939.2 14.52 14.52 2.064 2 1 1 0 804.9361 1528.8987 T746t TMT10 740 (K) ELESPLtPGK (V) ELES(0.0)PLT(0.99)PGK K:TMT10,t:Phosphorylated T ZNF609 152443.5 4 18 63.1 699.07 HUMAN 1 5.6518 -32.5721 KELFPQRSDNDLLKL-p Q9H4L7-2;S173-p KELFPQRSDNDLLKL 0.729035669255208 0.578287092757292 -0.0643333333333333 0.059 2.60602355463965 3.20926328060604 -0.0643333333333333 0.059 0.548779202893653 0.477610286641466 -0.639188754644661 0.762493399828307 Q9H4L7 SMARCAD1 Q9H4L7.2.S173.p_SMARCAD1 Q9H4L7-2_S173s_1_1_173_173 Q9H4L7-2 Q9H4L7-2 Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21270.21270.3 7.73 7.73 99 1 1 1 0 705.3761 2033.1432 S173s N175n TMT10 167 (K) ELFPQRsDnDLLK (L) ELFPQRS(1.0)DN(1.0)DLLK K:TMT10,s:Phosphorylated S,n:Deamidated SMARCAD1 118399.2 1 7 250.1 406.83 HUMAN 1 -2.606 3.2093 KELFSVRSLFDARVH-p Q9Y399;S83-p KELFSVRSLFDARVH 0.305159632119897 0.0919994443327988 0.156666666666667 0.316 9.66034892417705 13.7057240510804 0.156666666666667 0.316 0.108134706939881 0.0426017652457885 1.92275707013814 2.63750404772013 Q9Y399 MRPS2 Q9Y399.S83.p_MRPS2 Q9Y399_S83s _1_1_83_83 Q9Y399 Q9Y399 28S ribosomal protein S2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28568.28568.3 14.21 7.81 3.556 2 1 1 0 583.6361 1668.9271 S83s TMT10 77 (K) ELFSVRsLFDAR (V) ELFS(0.0)VRS(0.99)LFDAR s:Phosphorylated S MRPS2 33533.9 1 1 4347.1 33.06 HUMAN 1 9.6603 13.7057 KELGLENSHDGHNNV-p Q5T7V8;S140-p KELGLENSHDGHNNV 0.116602871314905 0.177623601106574 -0.279666666666667 -0.155 19.4339568315046 9.87252734574769 -0.279666666666667 -0.155 0.0113921138579277 0.102978666903146 -3.75851068031996 -1.95879161635445 Q5T7V8 GORAB Q5T7V8.S140.p_GORAB Q5T7V8_S140s _1_1_140_140 Q5T7V8 Q5T7V8|Q5T7V8-2 RAB6-interacting golgin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18026.18026.5 15.64 6.55 99 1 1 1 0 816.6359 3999.178 S140s TMT10 134 (K) ELGLENsHDGHNNVEILPPKPDCKLEK (K) ELGLENS(1.0)HDGHNNVEILPPKPDCKLEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GORAB 45334.6 1 2 4324.1 33.54 HUMAN 1 -19.434 -9.8725 KELGLGCSPPAETLA-p O60303;S660-p KELGLGCSPPAETLA 0.0348237164888253 0.0134174841058958 -0.598666666666667 -0.392 34.0916251689022 26.0402197382737 -0.598666666666667 -0.392 0.000389796094186669 0.00248873139373164 -7.78029261519272 -5.30516590034012 O60303 KIAA0556 O60303.S660.p_KIAA0556 O60303_S660s _1_1_660_660 O60303 O60303 Protein KIAA0556 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22913.22913.2 14.42 14.42 3.097 2 1 1 0 1134.0726 2187.1731 S660s TMT10 654 (K) ELGLGCsPPAETLADAK (L) ELGLGCS(0.99)PPAET(0.0)LADAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIAA0556 182055.4 2 5 1063.1 181.85 HUMAN 1 -34.0916 -26.0402 KELIKQVSPAASLRH-p Q5VWN6;S1087-p KELIKQVSPAASLRH 0.615310790207356 0.0605159721027278 -0.069 -0.285 3.91419585186563 16.2265330629703 -0.069 -0.285 0.40605084145716 0.023842220146345 -0.900692151071727 -3.1095728362476 Q5VWN6 FAM208B Q5VWN6.S1087.p_FAM208B Q5VWN6_S1087s _1_1_1087_1087 Q5VWN6 Q5VWN6 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7826.7826.3 13.78 8.86 1.453 5 1 1 0 772.7285 2236.1996 S1087s TMT10 1085 (K) QVsPAASLRHPVSTSENAR (T) QVS(0.99)PAAS(0.0)LRHPVS(0.0)T(0.0)S(0.0)ENAR s:Phosphorylated S FAM208B 271861.7 3 10 275.1 391.61 HUMAN 1 -3.9142 -16.2265 KELIPQESPRVGGFG-p Q96DF8;S292-p KELIPQESPRVGGFG 0.390119915720939 0.197108841855211 0.124666666666667 0.163666666666667 7.55806479927749 9.27952950539553 0.124666666666667 0.163666666666667 0.175466219888605 0.11804485130704 1.55838840724278 1.85607169711682 Q96DF8 DGCR14 Q96DF8.S292.p_DGCR14 Q96DF8_S292s _1_1_292_292 Q96DF8 Q96DF8 Protein DGCR14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13808.13808.2 12.4 8.12 99 1 1 1 0 689.3526 1297.7313 S292s TMT10 286 (K) ELIPQEsPR (V) ELIPQES(1.0)PR s:Phosphorylated S DGCR14 52624.2 2 3 924.1 199.86 HUMAN 1 7.5581 9.2795 KELKPQKSVVSDLEA-p P11388-2;S1400-p KELKPQKSVVSDLEA 0.425285027285192 0.0392327496995988 -0.209333333333333 -0.364333333333333 6.84035332337683 18.8786853203857 -0.209333333333333 -0.364333333333333 0.206997293781412 0.0129458767476016 -1.43303794147442 -3.6391649399375 P11388 TOP2A P11388.2.S1400.p_TOP2A P11388-2_S1400s _1_1_1400_1400 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21295.21295.3 14.39 11.12 3.45 2 1 1 0 605.6454 1734.9526 S1400s TMT10 1400 (K) sVVSDLEADDVK (G) S(0.99)VVS(0.0)DLEADDVK K:TMT10,s:Phosphorylated S TOP2A 178239.3 7 10 71.2 658.36 HUMAN 1 -6.8404 -18.8787 KELKQNRSQEIDDHQ-p Q15643;S226-p KELKQNRSQEIDDHQ 0.391198751974399 0.01256562110228 0.162 -0.547 7.521187521933 26.510221659193 0.162 -0.547 0.176962501114854 0.00223345822663607 1.55197062333966 -5.42940597235319 Q15643 TRIP11 Q15643.S226.p_TRIP11 Q15643_S226s _1_1_226_226 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7577.7577.5 18.25 18.25 8.959 2 1 1 0 688.5314 3358.6711 S226s TMT10 223 (K) QNRsQEIDDHQHEMSVLQNAHQQK (L) Q(0.0)N(0.0)RS(0.99)QEIDDHQHEM(0.0)S(0.0)VLQN(0.0)AHQQK K:TMT10,s:Phosphorylated S TRIP11 228267 1 1 463.1 303.86 HUMAN 1 7.5212 -26.5102 KELLSPLSEPDDRYP-p Q9UHB7;S706-p KELLSPLSEPDDRYP 0.675619048963686 0.0347846861506343 -0.0563333333333333 0.286666666666667 3.19159919319656 19.6396466810741 -0.0563333333333333 0.286666666666667 0.479556829944347 0.0108651401303139 -0.759066693658065 3.79856489632793 Q9UHB7 AFF4 Q9UHB7.S706.p_AFF4 Q9UHB7_S706s _1_1_706_706 Q9UHB7 Q9UHB7|Q9UHB7-2 AF4/FMR2 family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28163.28367.3 20.48 20.48 1.424 3 1 1 0 874.8091 2542.4533 S706s TMT10 700 (K) ELLSPLsEPDDRYPLIVK (I) ELLS(0.0)PLS(0.99)EPDDRY(0.0)PLIVK K:TMT10,s:Phosphorylated S AFF4 127856.3 5 17 137.1 525.98 HUMAN 1 -3.1916 19.6396 KELNTLCSELHVEPF-p O43663;S81-p KELNTLCSELHVEPF 0.255894371706111 0.968790153525082 0.211333333333333 -0.00399999999999997 11.2503316073031 0.194645396162894 0.211333333333333 -0.00399999999999997 0.0749836953043623 0.956170763702228 2.20002471157131 -0.0575469960286369 O43663 PRC1 O43663.S81.p_PRC1 O43663_S81s _1_1_81_81 O43663 O43663 Protein regulator of cytokinesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32232.32232.4 13.78 10.8 1.165 4 1 1 0 931.9651 3644.877 S81s TMT10 75 (K) ELNTLCsELHVEPFQEEGETTILQLEK (D) ELNT(0.0)LCS(0.99)ELHVEPFQEEGET(0.0)T(0.0)ILQLEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRC1 72290 1 1 715.1 238.03 HUMAN 1 11.2503 -0.1946 KELQNRLSQLQKAAD-p O94964-2;S1112-p KELQNRLSQLQKAAD 0.276322361958096 0.153949035488472 -0.186666666666667 -0.206333333333333 10.5645939268664 10.686589161495 -0.186666666666667 -0.206333333333333 0.0878093186546852 0.0853770380340162 -2.0799935915818 -2.1003727320748 O94964 SOGA1 O94964.2.S1112.p_SOGA1 O94964-2_S1112s _1_1_1112_1112 O94964-2 O94964-2 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14590.14590.3 8.82 8.82 99 1 1 1 0 632.3552 1815.0853 S1112s TMT10 1106 (K) ELQNRLsQLQK (A) ELQNRLS(1.0)QLQK K:TMT10,s:Phosphorylated S SOGA1 185623.3 1 10 215.1 433.51 HUMAN 1 -10.5646 -10.6866 KELQRAASQDHVRGF-p Q9Y314;S107-p KELQRAASQDHVRGF 0.207422631751664 0.00514141392999062 0.315 -0.708666666666667 13.1902895282066 33.3106993953108 0.315 -0.708666666666667 0.0479701467632775 0.000466584234735198 2.54541329145692 -7.49253731910962 Q9Y314 NOSIP Q9Y314.S107.p_NOSIP Q9Y314_S107s _1_1_107_107 Q9Y314 A0A075B6F9|Q9Y314 Nitric oxide synthase-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3719.3719.2 13.25 5.88 99 1 1 1 0 596.7875 1112.601 S107s TMT10 105 (R) AAsQDHVR (G) AAS(1.0)QDHVR s:Phosphorylated S NOSIP 33684.9 2 3 2908.1 66.21 HUMAN 1 13.1903 -33.3107 KELQRQASPNIVIAL-p P20339;S123-p KELQRQASPNIVIAL 0.355607691984306 0.150570208158758 -0.245333333333333 0.245666666666667 8.34578567039885 10.8153529306859 -0.245333333333333 0.245666666666667 0.146359673827262 0.0828828558540052 -1.69509840313978 2.12285262627836 P20339 RAB5A P20339.S123.p_RAB5A P20339_S123s _1_1_123_123 P20339 P20339 Ras-related protein Rab-5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24879.24879.3 13.92 13.92 13.917 2 1 1 0 650.7007 1870.1162 S123s TMT10 121 (R) QAsPNIVIALSGNK (A) QAS(0.99)PNIVIALS(0.0)GNK K:TMT10,s:Phosphorylated S RAB5A 23886.5 1 1 2563.3 78.41 HUMAN 1 -8.3458 10.8154 KELQTVLSTYLRPLQ-p Q14155-5;S202-p KELQTVLSTYLRPLQ 0.374495428006811 0.673796793702283 -0.136666666666667 0.0663333333333334 7.8976752690962 2.34435834428718 -0.136666666666667 0.0663333333333334 0.162267846697525 0.582859884052422 -1.61740486017864 0.583708538431442 Q14155 ARHGEF7 Q14155.5.S202.p_ARHGEF7 Q14155-5_S202s _1_1_202_202 Q14155-5 Q14155-3|Q14155-2|Q14155-5|B1ALK7|Q14155-1|Q14155-6 Isoform 5 of Rho guanine nucleotide exchange factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32886.32886.3 13.52 13.52 1.282 6 1 1 0 882.1515 2564.47 S202s TMT10 196 (K) ELQTVLsTYLRPLQTSEK (L) ELQT(0.0)VLS(0.99)T(0.0)Y(0.0)LRPLQT(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S ARHGEF7 83311.3 2 4 434.1 313.68 HUMAN 1 -7.8977 2.3444 KELSLKASPLRSETA-p Q86W50;S329-p KELSLKASPLRSETA 0.92648668397199 0.00902305396193763 -0.027 0.578333333333333 0.655281544771513 28.9403097818007 -0.027 0.578333333333333 0.85994731634888 0.00127634776381148 -0.185024152936324 6.1068460181787 Q86W50 METTL16 Q86W50.S329.p_METTL16 Q86W50_S329s _1_1_329_329 Q86W50 Q86W50 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.36007.36007.3 18.94 18.62 2.34 5 1 1 0 942.1824 2744.5599 S329s TMT10 328 (K) AsPLRSETAEGIVVVTTWIEK (I) AS(0.99)PLRS(0.0)ET(0.0)AEGIVVVT(0.0)T(0.0)WIEK K:TMT10,s:Phosphorylated S METTL16 64418.6 8 3 1049.1 183.96 HUMAN 1 -0.6553 28.9403 KELSPAGSISKNSPA-p O95453;S623-p KELSPAGSISKNSPA 0.771638354290043 0.944047661539362 0.0503333333333333 -0.00733333333333332 2.15821161736491 0.359694880153387 0.0503333333333334 -0.00733333333333332 0.608385476953451 0.920514241535946 0.543560899655486 -0.104520021511205 O95453 PARN O95453.S623.p_PARN O95453_S623s _1_1_623_623 O95453 O95453|O95453-3|O95453-2|O95453-4 Poly(A)-specific ribonuclease PARN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14397.14397.3 12.34 9.27 3.027 3 1 1 0 509.6127 1446.8568 S623s TMT10 617 (K) ELSPAGsISK (N) ELS(0.0)PAGS(0.99)IS(0.0)K K:TMT10,s:Phosphorylated S PARN 73963.1 2 9 320.1 365.2 HUMAN 1 2.1582 -0.3597 KELSRELSKELNHEI-p Q8NHM5;S951-p KELSRELSKELNHEI 0.147386831519369 0.851336641037526 -0.359 0.0306666666666667 16.8819485611723 0.982781706674703 -0.359 0.0306666666666667 0.0205024208459243 0.7974837260441 -3.23941956915727 0.269527320134719 Q8NHM5 KDM2B Q8NHM5.S951.p_KDM2B Q8NHM5_S951s _1_1_951_951 Q8NHM5 Q8NHM5|Q8NHM5-3|Q8NHM5-2|Q8NHM5-4|A0A0C4DGG3 Lysine-specific demethylase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10412.10412.3 9.3 2.22 9.301 2 1 1 0 500.6131 1419.8572 S951s TMT10 945 (K) ELSRELsK (E) ELS(0.0)RELS(0.99)K K:TMT10,s:Phosphorylated S KDM2B 155065.3 1 7 800.1 223.19 HUMAN 1 -16.8819 0.9828 KELSSPISPKSLQSD-p E9PGC8;S2260-p KELSSPISPKSLQSD 0.51600777106238 0.261283643437772 0.120333333333333 -0.203333333333333 5.30463135948293 7.67972851610465 0.120333333333333 -0.203333333333333 0.294806370534556 0.17061890420667 1.1596019069064 -1.57906817580346 E9PGC8 NotFound E9PGC8.S2260.p_NotFound E9PGC8_S2260s _1_1_2260_2260 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16135.16135.2 12.79 5.18 2.9 3 1 1 0 748.4125 1415.851 S2260s TMT10 2254 (K) ELSSPIsPK (S) ELS(0.0)S(0.0)PIS(0.99)PK K:TMT10,s:Phosphorylated S MAP1A 332906.7 2 33 20.1 1016.98 HUMAN 1 5.3046 -7.6797 KELTSTCSPIISKPK-p P34932;S780-p KELTSTCSPIISKPK 0.669683096605961 0.0497997777102317 -0.0696666666666667 0.440333333333333 3.2605844969607 17.4194717296278 -0.0696666666666667 0.440333333333333 0.471999512745995 0.0181156043516224 -0.772860728491611 3.34308914562856 P34932 HSPA4 P34932.S780.p_HSPA4 P34932_S780s _1_1_780_780 P34932 P34932 Heat shock 70 kDa protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15398.15398.3 11.38 11.38 11.376 5 1 1 0 928.1954 2702.6296 S780s TMT10 774 (K) ELTSTCsPIISKPKPK (V) ELT(0.0)S(0.0)T(0.0)CS(0.99)PIIS(0.0)KPKPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HSPA4 95185.1 5 18 549.1 274.67 HUMAN 1 -3.2606 17.4195 KELVGRAS_______-p A0A0G2JH68;S1272-p KELVGRAS_______ 0.441386699397351 0.208601228218609 -0.110333333333333 -0.133 6.54083533765798 8.95521926252163 -0.110333333333333 -0.133 0.221776980493634 0.127197353025888 -1.38037438877703 -1.79996700190111 A0A0G2JH68 NotFound A0A0G2JH68.S1272.p_NotFound A0A0G2JH68_S1272s _1_1_1272_1272 A0A0G2JH68 O60610|A0A0G2JH68|O60610-3|A0A140T8Z0|O60610-2|H9KV28 Protein diaphanous homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7801.7801.2 8.81 8.81 99 1 1 1 0 520.7714 960.5676 S1272s TMT10 1266 (K) ELVGRAs (-) ELVGRAS(1.0) s:Phosphorylated S DIAPH1 142040.6 2 4 2810.1 69.79 HUMAN 1 -6.5408 -8.9552 KEMISLLSPQKKKPR-p Q9Y2D8-3;S266-p KEMISLLSPQKKKPR 0.449347026753219 0.00657538228744706 0.175 -0.617666666666667 6.41670259181555 31.3739743480758 0.175 -0.617666666666667 0.228207409350992 0.000728790269005526 1.35847186075375 -6.84978059721911 Q9Y2D8 SSX2IP Q9Y2D8.3.S266.p_SSX2IP Q9Y2D8-3_S266s _1_1_266_266 Q9Y2D8-3 Q9Y2D8|Q9Y2D8-3|Q9Y2D8-2|S4R403 Isoform 3 of Afadin- and alpha-actinin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22066.22066.4 11.33 11.33 2.715 2 1 1 0 511.0502 1961.2072 S266s TMT10 260 (K) EMISLLsPQKK (K) EMIS(0.0)LLS(0.99)PQKK K:TMT10,s:Phosphorylated S SSX2IP 69071.5 2 2 1943.1 106.03 HUMAN 1 6.4167 -31.374 KEMKRKASEIKEAEA-p Q6ZNB6;S835-p KEMKRKASEIKEAEA 0.112193120608589 0.0219582309264411 0.663333333333333 -0.333 19.8441969102181 22.6644999465281 0.663333333333334 -0.333 0.0103652625933844 0.00541439586496164 3.84559284771059 -4.47064756149576 Q6ZNB6 NFXL1 Q6ZNB6.S835.p_NFXL1 Q6ZNB6_S835s _1_1_835_835 Q6ZNB6 Q6ZNB6 NF-X1-type zinc finger protein NFXL1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8518.8518.4 10.79 10.79 99 1 1 1 0 493.5338 1891.1467 S835s Hydrogen 833 (R) KAsEIKEAEAK (A) KAS(1.0)EIKEAEAK K:TMT10-Lys-Only,s:Phosphorylated S NFXL1 107784.8 2 6 2273.1 90.3 HUMAN 1 19.8442 -22.6645 KEMTKWNSNDFIDAF-p O00562;S373-p KEMTKWNSNDFIDAF 0.540948825382371 0.411006193956125 -0.0856666666666667 0.103333333333333 4.92328067062075 5.1369476069598 -0.0856666666666667 0.103333333333333 0.321863650721643 0.3064116258908 -1.08997994602818 1.12886276285976 O00562 PITPNM1 O00562.S373.p_PITPNM1 O00562_S373s _1_1_373_373 O00562 O00562|O00562-2 Membrane-associated phosphatidylinositol transfer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29628.29628.5 28.28 28.28 3.388 4 1 1 0 836.2073 4097.0417 S373s TMT10 367 (K) EMTKWNsNDFIDAFASPVEAEGTPEPGAEAAK (G) EMT(0.0)KWNS(0.99)NDFIDAFAS(0.0)PVEAEGT(0.0)PEPGAEAAK K:TMT10,s:Phosphorylated S PITPNM1 135986.3 7 2 1747.1 117.75 HUMAN 1 -4.9233 5.1369 KENAAAPSPVRAPAP-p O75781;S116-p KENAAAPSPVRAPAP 0.204437813280498 0.0804346514930602 -0.263 -0.251333333333333 13.3452217140306 14.5204005333461 -0.263 -0.251333333333333 0.0462890031924398 0.0353150598548331 -2.57346411301107 -2.78722858624026 O75781 PALM O75781.S116.p_PALM O75781_S116s _1_1_116_116 O75781 O75781|O75781-2 Paralemmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10362.10362.3 15.23 15.23 6.555 2 1 1 0 757.0762 2189.2443 S116s TMT10 110 (K) ENAAAPsPVRAPAPSPAK (E) ENAAAPS(0.99)PVRAPAPS(0.0)PAK K:TMT10,s:Phosphorylated S PALM 42246.4 3 1 1689.1 120.82 HUMAN 1 -13.3452 -14.5204 KENDPLRTPEALPEE-p O60293;T766-p KENDPLRTPEALPEE 0.538685971667493 0.441112031559253 -0.111666666666667 -0.0893333333333333 4.96592810312361 4.73308739186375 -0.111666666666667 -0.0893333333333333 0.318718439000159 0.336272428902675 -1.09781052242716 -1.05470628263668 O60293 ZFC3H1 O60293.T766.p_ZFC3H1 O60293_T766t _1_1_766_766 O60293 O60293|O60293-2 Zinc finger C3H1 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15257.15257.3 15.62 14.7 99 1 1 1 0 759.3913 2196.1912 T766t TMT10 760 (K) ENDPLRtPEALPEEK (K) ENDPLRT(1.0)PEALPEEK K:TMT10,t:Phosphorylated T ZFC3H1 228291.3 2 12 311.1 371.67 HUMAN 1 -4.9659 -4.7331 KENESSDSEEEVSRP-p Q6KC79;S2493-p KENESSDSEEEVSRP 0.255498822846135 0.0296855856884825 -0.259333333333333 0.610666666666667 11.2681650886569 20.6733152151592 -0.259333333333333 0.610666666666667 0.0746764202592899 0.00856383869460072 -2.20315789703801 4.02103893766363 Q6KC79 NIPBL Q6KC79.S2493.p_NIPBL Q6KC79_S2490sS2491sS2493s_3_3_2490_2493 Q6KC79 Q6KC79|Q6KC79-2 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5016.5430.3 9.35 9.35 9.353 4 3 3 0 740.2761 1978.9151 S2490s S2491s S2493s TMT10 2487 (K) ENEssDsEEEVSRPR (K) ENES(0.99)S(0.99)DS(0.99)EEEVS(0.0)RPR s:Phosphorylated S NIPBL 318099.5 1 39 50.1 752.87 HUMAN 1 -11.2682 20.6733 KENFALKTPLKEGNT-p O75330-3;T704-p KENFALKTPLKEGNT 0.887666244403471 0.20543308537984 -0.0413333333333333 -0.272333333333333 1.00789085174366 9.04426948959913 -0.0413333333333333 -0.272333333333333 0.792886301696276 0.124615783116091 -0.275856594960088 -1.8153699938967 O75330 HMMR O75330.3.T704.p_HMMR O75330-3_T704t _1_1_704_704 O75330-3 O75330-3|O75330-2|O75330-4 Isoform 3 of Hyaluronan mediated motility receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18355.18355.3 12.58 7.95 99 1 1 1 0 643.3793 1848.1562 T704t TMT10 698 (K) ENFALKtPLK (E) ENFALKT(1.0)PLK K:TMT10,t:Phosphorylated T HMMR 84626.5 2 6 2460.1 82.37 HUMAN 1 -1.0079 -9.0443 KENGRSNSLPIKKTV-p Q96JQ2;S419-p KENGRSNSLPIKKTV 0.53494190060823 0.0809551405376917 -0.111 0.234 5.02880623921653 14.4775937670599 -0.111 0.234 0.314137205539129 0.0356648681897709 -1.10933440169377 2.7792988731959 Q96JQ2 CLMN Q96JQ2.S419.p_CLMN Q96JQ2_S419s _1_1_419_419 Q96JQ2 Q96JQ2 Calmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14830.14830.2 10.64 3.81 2.749 2 1 1 0 648.8696 1216.7665 S419s TMT10 417 (R) SNsLPIK (K) S(0.0)NS(0.99)LPIK K:TMT10,s:Phosphorylated S CLMN 112105.2 8 6 726.1 236.61 HUMAN 1 -5.0288 14.4776 KENKGNDTPLALEST-p Q7Z6Z7;T1722-p KENKGNDTPLALEST 0.0615305467487212 0.0479445114290029 -0.404666666666667 -0.449333333333333 26.3842280449353 17.6474151825489 -0.404666666666667 -0.449333333333333 0.00229920235437549 0.017189311496977 -5.40312045373492 -3.38855125684695 Q7Z6Z7 HUWE1 Q7Z6Z7.T1722.p_HUWE1 Q7Z6Z7_T1722t _1_1_1722_1722 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9848.9848.4 17.33 15.29 4.489 4 1 1 0 811.1951 3161.7936 T1722t TMT10 1714 (K) RKENKGNDtPLALESTNTEK (E) RKENKGNDT(0.99)PLALES(0.0)T(0.0)NT(0.0)EK K:TMT10,t:Phosphorylated T HUWE1 485818.9 2 13 11.1 1210.45 HUMAN 1 -26.3842 -17.6474 KENKSKFSPQKEASP-p Q9NS91;S158-p KENKSKFSPQKEASP 0.918430174900821 0.003348748305798 0.0263333333333333 -0.937666666666667 0.719497378133519 37.0332042660823 0.0263333333333333 -0.937666666666667 0.847325471952634 0.000198006557548082 0.201957471058134 -8.87373062884587 Q9NS91 RAD18 Q9NS91.S158.p_RAD18 Q9NS91_S158s _1_1_158_158 Q9NS91 Q9NS91|F8WE49 E3 ubiquitin-protein ligase RAD18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10608.10608.4 9.19 9.19 1.358 3 1 1 0 618.8576 2392.437 S158s TMT10 155 (K) SKFsPQKEASPAAK (T) S(0.0)KFS(0.99)PQKEAS(0.0)PAAK K:TMT10,s:Phosphorylated S RAD18 57077.5 4 3 1349.1 151 HUMAN 1 0.7195 -37.0332 KENPRNFSDNQLQEG-p P37802;S163-p KENPRNFSDNQLQEG 0.328677632727316 0.0597011157656479 0.210666666666667 0.289333333333333 9.03611087004077 16.3079456349058 0.210666666666667 0.289333333333333 0.124850105305604 0.0233994385234871 1.81461413566916 3.12528341735252 P37802 TAGLN2 P37802.S163.p_TAGLN2 P37802_S163s _1_1_163_163 P37802 P37802-2 Transgelin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13636.13636.2 12.66 12.66 99 1 1 1 0 909.446 1737.9172 S163s TMT10 161 (R) NFsDNQLQEGK (N) NFS(1.0)DNQLQEGK K:TMT10,s:Phosphorylated S TAGLN2 22562.2 5 3 2811.1 69.69 HUMAN 1 9.0361 16.3079 KENQANTSVV_____-p Q9NP59;S569-p KENQANTSVV_____ 0.233121410286087 0.058479471210336 0.225333333333333 -0.305666666666667 12.1522369561611 16.4208537841033 0.225333333333333 -0.305666666666667 0.0609223018920653 0.0227989382120949 2.35936660863118 -3.14712486697333 Q9NP59 SLC40A1 Q9NP59.S569.p_SLC40A1 Q9NP59_S569s _1_1_569_569 Q9NP59 Q9NP59 Solute carrier family 40 member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8305.8305.2 7.99 7.99 1.538 2 1 1 0 814.4284 1547.8793 S569s TMT10 562 (R) KENQANTsVV (-) KENQANT(0.0)S(0.99)VV K:TMT10,s:Phosphorylated S SLC40A1 63225.7 1 1 7054.1 7.99 HUMAN 1 12.1522 -16.4209 KENQKHIYYITGETK-p P07900-2;Y614-p KENQKHIYYITGETK 0.336181898219159 0.979326453741939 -0.155666666666667 -0.00333333333333328 8.82707808552139 0.129476605039565 -0.155666666666667 -0.00333333333333328 0.131006303130094 0.970626936412034 -1.77842975523547 -0.0385524168153326 P07900 HSP90AA1 P07900.2.Y614.p_HSP90AA1 P07900-2_Y614y _1_1_614_614 P07900-2 P07900-2|Q58FG0 Isoform 2 of Heat shock protein HSP 90-alpha GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16274.16274.3 23.45 23.45 3.382 4 1 1 0 588.3105 1682.9518 Y614y TMT10 612 (K) HIyYITGETK (D) HIY(0.99)Y(0.0)IT(0.0)GET(0.0)K K:TMT10,y:Phosphorylated Y HSP90AA1 98729.9 5 4 3.1 124.79 HUMAN 1 -8.8271 -0.1295 KENSLCGSAPNSRAG-p Q2NKX8;S984-p KENSLCGSAPNSRAG 0.0386603595331013 0.0364477443114034 -0.529 -0.348666666666667 32.1625385456616 19.3517972342802 -0.529 -0.348666666666667 0.000607779637018903 0.011609680727563 -7.11803429505162 -3.73784543054467 Q2NKX8 ERCC6L Q2NKX8.S984.p_ERCC6L Q2NKX8_S984s _1_1_984_984 Q2NKX8 Q2NKX8|B5MDQ0 DNA excision repair protein ERCC-6-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6258.6258.2 14.55 14.55 3.398 3 1 1 0 800.8535 1520.7325 S984s TMT10 978 (K) ENSLCGsAPNSR (A) ENS(0.0)LCGS(0.99)APNS(0.0)R C:Carbamidomethylation,s:Phosphorylated S ERCC6L 142070.4 2 8 422.1 320.12 HUMAN 1 -32.1625 -19.3518 KENSPCVTPVSTATH-p Q08999;T417-p KENSPCVTPVSTATH 0.532941023714546 0.00333122814740401 0.175666666666667 -0.643333333333333 5.05785800467841 37.0676146972606 0.175666666666667 -0.643333333333333 0.312042823930067 0.00019644389216661 1.11465040579815 -8.88747430742048 Q08999 RBL2 Q08999.T417.p_RBL2 Q08999_S413sT417t_2_2_413_417 Q08999 Q08999|Q08999-2 Retinoblastoma-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18140.18140.4 15.66 15.66 5.534 8 2 2 0 742.1156 2805.4969 S413s T417t TMT10 408 (R) YIKENsPCVtPVSTATHSLSR (L) Y(0.0)IKENS(0.99)PCVT(0.99)PVS(0.0)T(0.0)AT(0.0)HS(0.0)LS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T RBL2 129790.7 2 17 408.1 323.79 HUMAN 1 5.0579 -37.0676 KENVDMWSVGCIMGE-p A0A286YF97;S248-p KENVDMWSVGCIMGE 0.331806819410894 0.601101222462308 0.161666666666667 0.0763333333333333 8.94844087159294 2.99695370376145 0.161666666666667 0.0763333333333334 0.127396035398815 0.501538907534513 1.79943759835151 0.719692541209704 A0A286YF97 NotFound A0A286YF97.S248.p_NotFound A0A286YF97_S248s_1_1_248_248 A0A286YF97 A0A286YF97|A0A286YES9|A0A286YFD7 Mitogen-activated protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28059.28059.5 9.38 5.77 1.128 2 1 1 0 746.357 3615.8158 S248s M253m M256m Hydrogen 231 (R) APEVILGMGYKENVDMWsVGCImGEmIK (G) APEVILGM(0.0)GY(0.0)KENVDM(0.0)WS(0.99)VGCIM(0.99)GEM(0.99)IK K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine MAPK10 52983.8 1 1 6804.1 9.38 HUMAN 1 8.9484 2.997 KENVPHESDYEDSSC-p Q9C0D0;S383-p KENVPHESDYEDSSC 0.251269011900731 0.0647517164887613 0.23 0.249 11.4477025158081 15.8199690576149 0.23 0.249 0.0716522361249878 0.0261820166217822 2.23473756331614 3.03158596956223 Q9C0D0 PHACTR1 Q9C0D0.S383.p_PHACTR1 Q9C0D0_S383s _1_1_383_383 Q9C0D0 Q9C0D0|Q9C0D0-2 Phosphatase and actin regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19401.19401.4 24.11 24.11 5.197 7 1 1 0 1059.9836 4156.948 S383s TMT10 364 (R) QVPTVVIECDDNKENVPHEsDYEDSSCLYTR (E) QVPT(0.0)VVIECDDNKENVPHES(0.99)DY(0.0)EDS(0.0)S(0.0)CLY(0.0)T(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PHACTR1 66763.3 2 9 638.1 255.38 HUMAN 1 11.4477 15.82 KEPCQVQSCQEEMIS-p Q15003;S401-p KEPCQVQSCQEEMIS 0.1787822380731 0.400470140865617 0.210333333333333 0.116 14.7631594026126 5.28478129067088 0.210333333333333 0.116 0.0333952008451293 0.296156910532358 2.83414842424993 1.15575404674922 Q15003 NCAPH Q15003.S401.p_NCAPH Q15003_S401s _1_1_401_401 Q15003 Q15003|E9PHA2|Q15003-2 Condensin complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22281.22281.3 10.22 10.22 2.392 3 1 1 0 1130.8604 3310.5907 S401s TMT10 392 (R) SWKEPCQVQsCQEEMISLGDGDIR (T) S(0.0)WKEPCQVQS(0.99)CQEEMIS(0.0)LGDGDIR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NCAPH 83360.5 1 11 558.1 272.98 HUMAN 1 14.7632 5.2848 KEPFTFSSPASGRSI-p Q6P1X5;S1185-p KEPFTFSSPASGRSI 0.930978723493408 0.196343700910103 -0.0133333333333333 0.136 0.6156111478977 9.29899440184753 -0.0133333333333334 0.136 0.867838444734218 0.117516963106625 -0.174469510133464 1.85944011294214 Q6P1X5 TAF2 Q6P1X5.S1185.p_TAF2 Q6P1X5_S1185sS1188s_2_2_1185_1188 Q6P1X5 Q6P1X5 Transcription initiation factor TFIID subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18019.18085.3 12.48 12.48 1.108 4 2 2 0 715.3333 1984.054 S1185s S1188s TMT10 1177 (K) DKEPFTFSsPAsGR (S) DKEPFT(0.0)FS(0.0)S(0.99)PAS(0.99)GR K:TMT10,s:Phosphorylated S TAF2 138452.4 5 5 3688.1 45.35 HUMAN 1 -0.6156 9.299 KEPIQPETPQPKPSV-p P49643;T470-p KEPIQPETPQPKPSV 0.993752696482329 0.00714231278100688 -0.00166666666666667 -0.548666666666667 0.0552147735281072 30.7131342512074 -0.00166666666666666 -0.548666666666667 0.987366805861867 0.000848567852756163 -0.0165787319552397 -6.64120732677756 P49643 PRIM2 P49643.T470.p_PRIM2 P49643_T470t _1_1_470_470 P49643 P49643 DNA primase large subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13387.13387.5 7.23 7.23 7.233 2 1 1 0 703.4177 3433.0803 T470t TMT10 460 (K) DIKKEPIQPEtPQPKPSVQK (T) DIKKEPIQPET(0.99)PQPKPS(0.0)VQK K:TMT10,t:Phosphorylated T PRIM2 59261.3 1 1 7220.1 7.23 HUMAN 1 -0.0552 -30.7131 KEPKEKGSPGQNDQE-p Q9H3H1;S455-p KEPKEKGSPGQNDQE 0.315053886408186 0.926905875789231 -0.248 0.01 9.38564447614996 0.465678697625258 -0.248 0.01 0.115195510147667 0.898322195487936 -1.87514319252828 0.133885706663512 Q9H3H1 TRIT1 Q9H3H1.S455.p_TRIT1 Q9H3H1_S455s _1_1_455_455 Q9H3H1 Q9H3H1|Q9H3H1-4|Q9H3H1-5|Q9H3H1-2 tRNA dimethylallyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8052.8052.3 13.66 8.58 99 1 1 1 0 733.0531 2117.1806 S455s TMT10 452 (K) EKGsPGQNDQELK (C) EKGS(1.0)PGQNDQELK K:TMT10,s:Phosphorylated S TRIT1 53066.6 1 2 4198.1 35.57 HUMAN 1 -9.3856 0.4657 KEPKTSASDSQNSVK-p R4GMW8;S1581-p KEPKTSASDSQNSVK 0.231502223963241 0.118680383133908 0.205333333333333 0.163 12.2167699657571 12.2056686741498 0.205333333333333 0.163 0.0600237332521203 0.0601773601940794 2.37084356736633 2.36766319827822 R4GMW8 NotFound R4GMW8.S1581.p_NotFound R4GMW8_S1581s _1_1_1581_1581 R4GMW8 R4GMW8|A0A1W2PS85|P28715|P28715-2 BIVM-ERCC5 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6073.6073.2 15.11 10.75 1.343 5 1 1 0 831.4108 1581.8484 S1581s TMT10 1578 (K) TSAsDSQNSVK (E) T(0.0)S(0.0)AS(0.99)DS(0.0)QNS(0.0)VK K:TMT10,s:Phosphorylated S BIVM-ERCC5 185876.1 1 13 561.1 271.77 HUMAN 1 12.2168 12.2057 KEPLIPASPKAEPIW-p Q9Y613;S523-p KEPLIPASPKAEPIW 0.036022948076598 0.00965343672233659 -0.556 -0.557333333333333 33.3991082387893 28.4047567048717 -0.556 -0.557333333333333 0.000457182055732456 0.00144385748803852 -7.53678474886331 -5.95229194936578 Q9Y613 FHOD1 Q9Y613.S523.p_FHOD1 Q9Y613_S523s _1_1_523_523 Q9Y613 Q9Y613 FH1/FH2 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27202.27202.4 18.81 15.41 5.267 3 1 1 0 909.2629 3554.0601 S523s TMT10 510 (R) SLAPEPKEPLIPAsPKAEPIWELPTR (A) S(0.0)LAPEPKEPLIPAS(0.99)PKAEPIWELPT(0.0)R K:TMT10,s:Phosphorylated S FHOD1 127404.8 13 6 730.1 236 HUMAN 1 -33.3991 -28.4048 KEPQKNESSNASEEE-p Q9H6Z4-3;S172-p KEPQKNESSNASEEE 0.883958612667082 0.0035390166930334 -0.0473333333333333 0.801333333333333 1.05631898495794 36.592501550588 -0.0473333333333334 0.801333333333333 0.784093947496013 0.000219154223614536 -0.287946395552462 8.69937279735394 Q9H6Z4 RANBP3 Q9H6Z4.3.S172.p_RANBP3 Q9H6Z4-3_S172sS173sS176s_3_3_172_176 Q9H6Z4-3 Q9H6Z4|Q9H6Z4-3 Isoform 3 of Ran-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21924.21924.5 18.65 18.65 18.649 5 3 3 0 968.4241 4598.2168 S172s S173s S176s TMT10 151 (R) SPSEAADEVCALEEKEPQKNEssNAsEEEACEK (K) S(0.0)PS(0.0)EAADEVCALEEKEPQKNES(0.99)S(0.99)NAS(0.99)EEEACEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RANBP3 53752.1 1 20 444.1 311.24 HUMAN 1 -1.0563 36.5925 KEPSEVPTPKRPRGR-p P17096;T53-p KEPSEVPTPKRPRGR 0.954455366259206 0.00203605351766751 -0.0116666666666667 -0.764666666666667 0.397598687179483 41.9783128938892 -0.0116666666666667 -0.764666666666667 0.912515250298415 6.34115998799376e-05 -0.115101522196102 -11.0579836520265 P17096 HMGA1 P17096.T53.p_HMGA1 P17096_T53t _1_1_53_53 P17096 P17096-3 High mobility group protein HMG-I/HMG-Y HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16467.16467.4 25.78 25.78 4.509 5 1 1 0 889.504 3475.0342 T53t TMT10 31 (R) KQPPVSPGTALVGSQKEPSEVPtPK (R) KQPPVS(0.0)PGT(0.0)ALVGS(0.0)QKEPS(0.0)EVPT(0.99)PK K:TMT10,t:Phosphorylated T HMGA1 11675.8 8 5 1152.1 172.09 HUMAN 1 -0.3976 -41.9783 KEPVRADSPVHMEQQ-p O95402;S447-p KEPVRADSPVHMEQQ 0.516065444995024 0.398058974481169 0.0986666666666667 0.0946666666666667 5.30382967871736 5.31883627055814 0.0986666666666667 0.0946666666666667 0.294860794991123 0.29384369259424 1.15945644286843 1.16193104131156 O95402 MED26 O95402.S447.p_MED26 O95402_S447s _1_1_447_447 O95402 O95402 Mediator of RNA polymerase II transcription subunit 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11734.11734.5 14.99 14.99 4.049 3 1 1 0 714.7916 3489.9567 S447s TMT10 433 (R) QIKPLTQKEPVRADsPVHMEQQSR (T) QIKPLT(0.0)QKEPVRADS(0.99)PVHMEQQS(0.0)R K:TMT10,s:Phosphorylated S MED26 65901.7 4 8 901.1 203.59 HUMAN 1 5.3038 5.3188 KEQDRVHSPCPTSGS-p Q96LT9;S108-p KEQDRVHSPCPTSGS 0.568265545283393 0.013651039737634 -0.087 0.372333333333333 4.51858924600069 25.9110463302278 -0.087 0.372333333333334 0.353297915782256 0.00256386625893471 -1.01504840837979 5.27138549439514 Q96LT9 RNPC3 Q96LT9.S108.p_RNPC3 Q96LT9_S108s _1_1_108_108 Q96LT9 Q96LT9|Q96LT9-2 RNA-binding protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4693.4693.3 14.42 9.46 2.623 4 1 1 0 784.7067 2272.1392 S108s TMT10 102 (K) EQDRVHsPCPTSGSEK (K) EQDRVHS(0.99)PCPT(0.0)S(0.0)GS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RNPC3 59030.5 5 2 1949.1 105.79 HUMAN 1 -4.5186 25.911 KEQELNQSISEKETL-p Q15643;S486-p KEQELNQSISEKETL 0.324713050985466 0.00253640733452666 -0.181 -0.824666666666667 9.15095919209081 39.6919574412727 -0.181 -0.824666666666667 0.12159174208631 0.000107350545558018 -1.83449788565137 -9.99366511845889 Q15643 TRIP11 Q15643.S486.p_TRIP11 Q15643_S486s _1_1_486_486 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29671.29671.5 21.11 21.11 1.19 4 1 1 0 857.4443 4203.2236 S486s TMT10 480 (K) EQELNQsISEKETLIAEIEELDRQNQEATK (H) EQELNQS(0.99)IS(0.0)EKET(0.0)LIAEIEELDRQNQEAT(0.0)K K:TMT10,s:Phosphorylated S TRIP11 228267 3 7 463.1 303.86 HUMAN 1 -9.151 -39.692 KEQIKGGTGDEKKAK-p Q12904-2;T141-p KEQIKGGTGDEKKAK 0.185265661787907 0.135937774152489 0.243666666666667 -0.155666666666667 14.3960540501583 11.4191942179491 0.243666666666667 -0.155666666666667 0.0363408093237431 0.0721241284560359 2.76592927529261 -2.22866930599331 Q12904 AIMP1 Q12904.2.T141.p_AIMP1 Q12904-2_T141t _1_1_141_141 Q12904-2 Q12904-2 Isoform 2 of Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7628.7628.3 11.91 11.91 99 1 1 1 0 643.6824 1849.0634 T141t TMT10 135 (K) EQIKGGtGDEK (K) EQIKGGT(1.0)GDEK K:TMT10,t:Phosphorylated T AIMP1 37380.8 2 1 2576.1 78.03 HUMAN 1 14.3961 -11.4192 KERDKEVSDDEAEEK-p P07900;S231-p KERDKEVSDDEAEEK 0.0619423937139172 0.224170632465528 -0.784666666666667 0.459666666666667 26.3071608249745 8.55312486641169 -0.784666666666667 0.459666666666667 0.00234036673985673 0.13953639975808 -5.38264236290682 1.730416101094 P07900 HSP90AA1 P07900.S231.p_HSP90AA1 P07900_S231s _1_1_231_231 P07900 P07900-2 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10335.10335.3 18.81 18.81 99 1 1 1 0 1012.1649 2954.5136 S231s TMT10 229 (K) EVsDDEAEEKEDKEEEK (E) EVS(1.0)DDEAEEKEDKEEEK K:TMT10,s:Phosphorylated S HSP90AA1 85057.6 65 4 43.1 810.87 HUMAN 1 -26.3072 8.5531 KEREKEISDDEAEEE-p P08238;S226-p KEREKEISDDEAEEE 0.0680523400848422 0.848420448181924 -0.852333333333333 0.113666666666667 25.1959803076685 1.00240803470971 -0.852333333333334 0.113666666666667 0.00302274818613596 0.793887925245218 -5.09358442656219 0.274455307388604 P08238 HSP90AB1 P08238.S226.p_HSP90AB1 P08238_S226s _1_1_226_226 P08238 P08238|Q58FF7 Heat shock protein HSP 90-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12252.12252.4 20.21 20.21 99 1 1 1 0 1020.7463 3999.9903 S226s TMT10 224 (K) EIsDDEAEEEKGEKEEEDKDDEEK (P) EIS(1.0)DDEAEEEKGEKEEEDKDDEEK K:TMT10,s:Phosphorylated S HSP90AB1 83605 30 26 43.2 810.87 HUMAN 1 -25.196 1.0024 KERIRPLSDGNSPWS-p A0A1W2PKR9;S614-p KERIRPLSDGNSPWS 0.757811548618003 0.056261419355834 -0.057 -0.299666666666667 2.30666308235866 16.6537036713618 -0.057 -0.299666666666667 0.58794092559848 0.0216087493959379 -0.575692499074445 -3.19236565433963 A0A1W2PKR9 NotFound A0A1W2PKR9.S614.p_NotFound A0A1W2PKR9_S614s _1_1_614_614 A0A1W2PKR9 X6R610|Q5TCX8|A0A1W2PKR9|Q5TCX8-3 Mitogen-activated protein kinase kinase kinase 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29719.29719.4 7.62 8.83 1.204 4 1 1 0 609.5931 2355.38 S614s TMT10 610 (R) IRPLsDGNSPWSTILIK (N) IRPLS(0.99)DGNS(0.0)PWS(0.0)T(0.0)ILIK K:TMT10,s:Phosphorylated S MAP3K21 115095.7 5 4 2799.1 70.16 HUMAN 1 -2.3067 -16.6537 KERKRDHSNNDREVP-p Q8NI27;S1486-p KERKRDHSNNDREVP 0.39120743112417 0.473349491362873 0.119333333333333 -0.0696666666666667 7.51480759012811 4.33052761637238 0.119333333333333 -0.0696666666666667 0.177222656013957 0.368932774883674 1.55086010926447 -0.979629959892435 Q8NI27 THOC2 Q8NI27.S1486.p_THOC2 Q8NI27_S1486s _1_1_1486_1486 Q8NI27 Q8NI27|A0A0C4DG98|Q8NI27-2 THO complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8974.9248.3 17.34 17.34 17.342 2 1 1 0 682.6548 1965.9827 S1486s Hydrogen 1484 (R) DHsNNDREVPPDLTK (R) DHS(0.99)NNDREVPPDLT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S THOC2 184654.1 5 14 512.1 287.1 HUMAN 1 7.5148 -4.3305 KERKRHKTDPSAAGR-p Q96L91;T2294-p KERKRHKTDPSAAGR 0.0948633510902073 0.124268209113983 0.371666666666667 -0.238666666666667 21.7468051774491 11.9467353613379 0.371666666666667 -0.238666666666667 0.00668835755683084 0.0638743456143327 4.26426902808334 -2.32173808266126 Q96L91 EP400 Q96L91.T2294.p_EP400 Q96L91_T2294t _1_1_2294_2294 Q96L91 Q96L91|Q96L91-2 E1A-binding protein p400 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3539.3539.4 8.46 5.95 7.634 2 1 1 0 484.5247 1855.1117 T2294t TMT10 2292 (R) HKtDPSAAGRK (K) HKT(0.99)DPS(0.0)AAGRK K:TMT10,t:Phosphorylated T EP400 344909.2 3 23 91.1 620.97 HUMAN 1 21.7468 -11.9467 KERRRSRSIDRGLER-p Q5VTL8;S320-p KERRRSRSIDRGLER 0.282479111109479 0.537827521290608 0.224333333333333 0.099 10.3815463351153 3.62313332541417 0.224333333333333 0.099 0.0915894321639921 0.434196849037267 2.04808313154161 0.844235581024601 Q5VTL8 PRPF38B Q5VTL8.S320.p_PRPF38B Q5VTL8_S320s _1_1_320_320 Q5VTL8 Q5VTL8|A0A0A0MRN0 Pre-mRNA-splicing factor 38B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7216.7216.3 11.39 4.55 99 1 1 1 0 418.8847 1174.6742 S320s TMT10 320 (R) sIDRGLER (R) S(1.0)IDRGLER s:Phosphorylated S PRPF38B 64695 2 2 2128.1 96.59 HUMAN 1 10.3815 3.6231 KERSRINSSGESGDE-p O60841;S182-p KERSRINSSGESGDE 0.887539377298516 0.0136048287828112 -0.0288333333333333 0.4995 1.00871392089557 25.9354066991201 -0.0288333333333333 0.4995 0.792736049172464 0.00254952532394186 -0.276062796698152 5.27774409869389 O60841 EIF5B O60841.S182.p_EIF5B O60841_S182sS183s_2_2_182_183 O60841 O60841|A0A087WUT6 Eukaryotic translation initiation factor 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.13300.13496.2 12.8 12.8 1.69 5 2 2 0 1058.8893 1956.8417 S182s S183s Hydrogen 180 (R) INssGESGDESDEFLQSR (K) INS(0.99)S(0.99)GES(0.0)GDES(0.0)DEFLQS(0.0)R s:Phosphorylated S EIF5B 139280.8 4 17 113.1 571.22 HUMAN 2 -1.0087 25.9354 KERSRPFTVAASFQS-p Q9UHB6-4;T593-p KERSRPFTVAASFQS 0.278656842374099 0.0568783622925847 -0.157 -0.417 10.4921885089915 16.5913073001988 -0.157 -0.417 0.0892855440119764 0.0219214496313466 -2.06736545381717 -3.1802162591599 Q9UHB6 LIMA1 Q9UHB6.4.T593.p_LIMA1 Q9UHB6-4_T593t _1_1_593_593 Q9UHB6-4 Q9UHB6-4 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17649.17649.3 11.12 11.12 1.214 6 1 1 0 774.0852 2240.2691 T593t Hydrogen 591 (R) PFtVAASFQSTSVKSPK (T) PFT(0.99)VAAS(0.0)FQS(0.0)T(0.0)S(0.0)VKS(0.0)PK K:TMT10-Lys-Only,t:Phosphorylated T LIMA1 85678.4 1 23 42.1 822.82 HUMAN 1 -10.4922 -16.5913 KERTLSASAAEVAPR-p Q16825;S660-p KERTLSASAAEVAPR 0.24308570935493 0.102989559276006 0.273333333333333 -0.179333333333333 11.7482902776731 13.0393711102563 0.273333333333333 -0.179333333333333 0.0668607081739384 0.0496664236808148 2.28776626628615 -2.51677795021486 Q16825 PTPN21 Q16825.S660.p_PTPN21 Q16825_S660s _1_1_660_660 Q16825 Q16825 Tyrosine-protein phosphatase non-receptor type 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13117.13117.2 14.82 14.82 1.108 3 1 1 0 741.3816 1401.7899 S660s TMT10 656 (R) TLSAsAAEVAPR (A) T(0.0)LS(0.0)AS(0.99)AAEVAPR s:Phosphorylated S PTPN21 134191.5 2 8 762.1 229.75 HUMAN 1 11.7483 -13.0394 KESANKMSPSGGAPQ-p Q9BY89;S1154-p KESANKMSPSGGAPQ 0.0478004497076443 0.00701753853914177 -0.469 -0.689 29.3346031682295 30.855663380995 -0.469 -0.689 0.00116557354896303 0.000821171110090545 -6.23220210050456 -6.68574762372387 Q9BY89 KIAA1671 Q9BY89.S1154.p_KIAA1671 Q9BY89_S1154s _1_1_1154_1154 Q9BY89 Q9BY89 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10944.10944.3 15.59 10.94 1.258 6 1 1 0 856.7683 2488.323 S1154s TMT10 1148 (K) ESANKMsPSGGAPQTTPTLR (S) ES(0.0)ANKMS(0.99)PS(0.0)GGAPQT(0.0)T(0.0)PT(0.0)LR K:TMT10,s:Phosphorylated S KIAA1671 197734.4 2 15 105.1 590.35 HUMAN 1 -29.3346 -30.8557 KESESEDSSDDEPLI-p P35659;S306-p KESESEDSSDDEPLI 0.992821359885708 0.110204808911674 0.00149999999999998 0.173333333333333 0.0643803680102083 12.6484748063591 0.00149999999999999 0.173333333333333 0.985285208873666 0.054344114843656 0.0193108170670671 2.44661350593322 P35659 DEK P35659.S306.p_DEK P35659_S306sS307s_2_2_306_307 P35659 P35659|B4DFG0 Protein DEK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11981.11981.4 8.78 8.78 3.267 6 2 2 0 975.7438 3740.0211 S306s S307s TMT10 292 (K) KNQNSSKKESESEDssDDEPLIK (K) KNQNS(0.0)S(0.0)KKES(0.0)ES(0.0)EDS(0.99)S(0.99)DDEPLIK K:TMT10,s:Phosphorylated S DEK 42958.8 3 10 488.1 294.94 HUMAN 2 0.0644 12.6485 KESGQEGSTDNDDSS-p O75362;S321-p KESGQEGSTDNDDSS 0.685362519428199 0.707123739017157 -0.098 -0.0426666666666667 3.0777845266532 2.06772620231198 -0.098 -0.0426666666666667 0.492290604625898 0.621194182317748 -0.73616741138964 -0.523687229886899 O75362 ZNF217 O75362.S321.p_ZNF217 O75362_S321sT322t_2_2_321_322 O75362 O75362 Zinc finger protein 217 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15848.15848.4 17.8 17.8 2.464 6 2 2 0 887.3981 3386.6473 S321s T322t TMT10 307 (K) VAICQEVKESGQEGstDNDDSSSEK (E) VAICQEVKES(0.0)GQEGS(0.99)T(0.99)DNDDS(0.0)S(0.0)S(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T ZNF217 117152.8 2 16 394.1 330.8 HUMAN 1 -3.0778 -2.0677 KESKKFATLPRKESA-p Q9NV70;T445-p KESKKFATLPRKESA 0.777448579667312 0.0121526262690136 -0.0503333333333333 0.391666666666667 2.09926992975219 26.7478538766028 -0.0503333333333333 0.391666666666667 0.616698663207305 0.00211453370638586 -0.530675548305115 5.49302684733399 Q9NV70 EXOC1 Q9NV70.T445.p_EXOC1 Q9NV70_T445t _1_1_445_445 Q9NV70 Q9NV70 Exocyst complex component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13411.13411.3 8.42 8.42 99 1 1 1 0 457.6028 1290.8298 T445t TMT10 442 (K) KFAtLPR (K) KFAT(1.0)LPR K:TMT10,t:Phosphorylated T EXOC1 102835.5 1 1 871.1 209.68 HUMAN 1 -2.0993 26.7479 KESKLERTPQKNVQG-p P35251;T506-p KESKLERTPQKNVQG 0.943309913754527 0.000952253650599092 0.018 -1.63633333333333 0.499055396268225 54.3425846876053 0.018 -1.63633333333333 0.89144480901156 3.67909948222971e-06 0.143025894543308 -18.925381414647 P35251 RFC1 P35251.T506.p_RFC1 P35251_T506t _1_1_506_506 P35251 P35251|P35251-2 Replication factor C subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7262.7468.4 11.6 4.67 4.666 2 1 1 0 496.5366 1903.158 T506t TMT10 500 (K) ESKLERtPQK (N) ES(0.0)KLERT(0.99)PQK K:TMT10,t:Phosphorylated T RFC1 128765.8 4 12 316.1 367.51 HUMAN 1 0.4991 -54.3426 KESRKSQSPSPKNES-p Q99590;S832-p KESRKSQSPSPKNES 0.166662576111015 0.0511846070859595 0.546666666666667 -0.370666666666667 15.5569916289136 17.2313445354141 0.546666666666667 -0.370666666666667 0.0278163945065447 0.0189175785729912 2.98358284128788 -3.30577793591403 Q99590 SCAF11 Q99590.S832.p_SCAF11 Q99590_S830sS832s_2_2_830_832 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4200.4200.3 8.72 2.67 6.654 4 2 2 0 678.6654 1874.0496 S830s S832s Hydrogen 829 (R) KsQsPSPKNESAR (G) KS(0.99)QS(0.99)PS(0.0)PKNES(0.0)AR K:TMT10-Lys-Only,s:Phosphorylated S SCAF11 166418 6 33 120.1 549.85 HUMAN 1 15.557 -17.2313 KESRNDISLILNEYA-p Q5VWN6;S2109-p KESRNDISLILNEYA 0.129739749890184 0.00262293931700471 -0.31 -0.675333333333333 18.3714943154435 39.2934174469752 -0.31 -0.675333333333333 0.0145495837404668 0.000117667968429539 -3.53784260548656 -9.81804561691891 Q5VWN6 FAM208B Q5VWN6.S2109.p_FAM208B Q5VWN6_S2109s _1_1_2109_2109 Q5VWN6 Q5VWN6 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33953.33953.3 14.07 14.07 2.814 2 1 1 0 698.0109 2012.0538 S2109s Hydrogen 2106 (R) NDIsLILNEYAEFNK (V) NDIS(0.99)LILNEY(0.0)AEFNK K:TMT10-Lys-Only,s:Phosphorylated S FAM208B 271861.7 1 19 275.1 391.61 HUMAN 1 -18.3715 -39.2934 KESSHNSSFELIGST-p Q9HAW4;S775-p KESSHNSSFELIGST 0.479057002146671 0.164479349050349 0.158666666666667 -0.161333333333333 5.88230127688825 10.3076619367393 0.158666666666667 -0.161333333333333 0.258089224289604 0.0931609280692184 1.26356803995913 -2.0343648504405 Q9HAW4 CLSPN Q9HAW4.S775.p_CLSPN Q9HAW4_S775s _1_1_775_775 Q9HAW4 Q9HAW4|Q9HAW4-3|E7ESG2|Q9HAW4-2 Claspin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20536.20536.3 13.77 13.77 1.155 8 1 1 0 973.7795 2839.3518 S775s TMT10 769 (K) ESSHNSsFELIGSTIPSYQPCNR (Q) ES(0.0)S(0.0)HNS(0.0)S(0.99)FELIGS(0.0)T(0.0)IPS(0.0)Y(0.0)QPCNR C:Carbamidomethylation,s:Phosphorylated S CLSPN 151718.8 1 5 506.1 289.61 HUMAN 1 5.8823 -10.3077 KESSPIPSPTSDRKA-p A0A087WUZ3;S2171-p KESSPIPSPTSDRKA 0.0353556494160708 0.710363521107458 -0.572333333333333 0.0436666666666667 33.8208198818738 2.0420084468689 -0.572333333333333 0.0436666666666667 0.00041487571302147 0.624883641015945 -7.68428106974529 0.518024531204948 A0A087WUZ3 NotFound A0A087WUZ3.S2171.p_NotFound A0A087WUZ3_S2171s _1_1_2171_2171 A0A087WUZ3 A0A087WUZ3|Q01082 Spectrin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9777.9777.2 11.21 10.26 1.768 5 1 1 0 970.0016 1859.0275 S2171s TMT10 2165 (K) ESSPIPsPTSDRK (A) ES(0.0)S(0.0)PIPS(0.99)PT(0.0)S(0.0)DRK K:TMT10,s:Phosphorylated S SPTBN1 275623.3 3 16 233.1 420.49 HUMAN 1 -33.8208 2.042 KESTSSKSPPRKINS-p P78347;S823-p KESTSSKSPPRKINS 0.168030571003973 0.143883461976472 0.310333333333333 0.202 15.4644791283137 11.0904880669746 0.310333333333333 0.202 0.0284152896371565 0.0777949118980536 2.9660270725526 2.17098163880866 P78347 GTF2I P78347.S823.p_GTF2I P78347_S823s _1_1_823_823 P78347 P78347|P78347-3|P78347-4|P78347-2 General transcription factor II-I HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.4664.4867.4 9.09 5.09 1.393 5 1 1 0 493.5274 1891.1216 S823s TMT10 817 (K) ESTSSKsPPRK (I) ES(0.0)T(0.0)S(0.0)S(0.0)KS(0.99)PPRK K:TMT10,s:Phosphorylated S GTF2I 112927.8 15 12 140.1 523.54 HUMAN 1 15.4645 11.0905 KESVPSASPTGIPKH-p Q5THJ4;S2079-p KESVPSASPTGIPKH 0.384110837361105 0.984653817148504 -0.131333333333333 0.00233333333333335 7.69389885237171 0.0994553616434468 -0.131333333333333 0.00233333333333336 0.170063109163463 0.977359781630903 -1.58201086974935 0.0297119566588641 Q5THJ4 VPS13D Q5THJ4.S2079.p_VPS13D Q5THJ4_S2079s _1_1_2079_2079 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15294.15294.2 15.51 10.97 1.193 4 1 1 0 904.484 1727.9944 S2079s TMT10 2073 (K) ESVPSAsPTGIPK (H) ES(0.0)VPS(0.0)AS(0.99)PT(0.0)GIPK K:TMT10,s:Phosphorylated S VPS13D 495672.3 4 15 124.1 545.31 HUMAN 1 -7.6939 0.0995 KESWEMNSEEKLEQS-p Q02790;S263-p KESWEMNSEEKLEQS 0.595703687719654 0.997696815866344 -0.0833333333333334 -0.000333333333333315 4.15128823891087 0.0138112882235383 -0.0833333333333333 -0.000333333333333298 0.384477718283378 0.99682488473591 -0.945940244628114 -0.00416616005035497 Q02790 FKBP4 Q02790.S263.p_FKBP4 Q02790_S263s _1_1_263_263 Q02790 Q02790 Peptidyl-prolyl cis-trans isomerase FKBP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18929.18929.4 20.33 20.33 4.535 4 1 1 0 841.4493 3282.8061 S263s TMT10 255 (K) AKESWEMNsEEKLEQSTIVK (E) AKES(0.0)WEMNS(0.99)EEKLEQS(0.0)T(0.0)IVK K:TMT10,s:Phosphorylated S FKBP4 52088.9 7 8 706.1 239.22 HUMAN 1 -4.1513 -0.0138 KETDPVKSPPLPEHQ-p Q96JM3;S108-p KETDPVKSPPLPEHQ 0.237800187730078 0.0720003671632937 -0.174666666666667 -0.239666666666667 11.948160570827 15.184350992028 -0.174666666666667 -0.239666666666667 0.0638533876257572 0.0303085319346088 -2.32314308822783 -2.91117003206049 Q96JM3 CHAMP1 Q96JM3.S108.p_CHAMP1 Q96JM3_S108s _1_1_108_108 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14078.14078.5 17.86 17.86 2.753 3 1 1 0 739.8002 3615.0022 S108s TMT10 102 (K) ETDPVKsPPLPEHQKIPCNSAEPK (S) ET(0.0)DPVKS(0.99)PPLPEHQKIPCNS(0.0)AEPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CHAMP1 90067.4 9 2 25.1 950.05 HUMAN 1 -11.9482 -15.1844 KETEGADSPRPEDSG-p Q5T481;S1210-p KETEGADSPRPEDSG 0.0732853965819104 0.0327568992683368 0.417333333333333 0.503333333333333 24.4031840600291 20.0324188116291 0.417333333333333 0.503333333333334 0.00362811959140107 0.00992563084492738 4.8941924807336 3.88227093015913 Q5T481 RBM20 Q5T481.S1210.p_RBM20 Q5T481_S1210s _1_1_1210_1210 Q5T481 Q5T481 RNA-binding protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25077.25077.4 18.02 12.81 2.168 5 1 1 0 921.2134 3601.875 S1210s TMT10 1193 (K) YLSQLAEEGLKETEGADsPRPEDSGIVPR (F) Y(0.0)LS(0.0)QLAEEGLKET(0.0)EGADS(0.99)PRPEDS(0.0)GIVPR K:TMT10,s:Phosphorylated S RBM20 135496 2 14 522.1 283.33 HUMAN 1 24.4032 20.0324 KETEGSLSDSDFKEP-p P78411;S248-p KETEGSLSDSDFKEP 0.46456903942077 0.0122646504762075 -0.183 0.409 6.1433527952196 26.6841781406966 -0.183 0.409 0.243032704876744 0.00214576514220219 -1.31006073898883 5.47592540253764 P78411 IRX5 P78411.S248.p_IRX5 P78411_S248s _1_1_248_248 P78411 P78411|P78411-2|P78411-3 Iroquois-class homeodomain protein IRX-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15422.15422.3 9.12 9.12 1.168 4 1 1 0 618.2919 1772.8954 S248s TMT10 242 (K) ETEGSLsDSDFK (E) ET(0.0)EGS(0.0)LS(0.99)DS(0.0)DFK K:TMT10,s:Phosphorylated S IRX5 50702.2 1 3 1529.1 133.88 HUMAN 1 -6.1434 26.6842 KETEKSQSSKKPYSD-p P46926;S282-p KETEKSQSSKKPYSD 0.386900375830555 0.0101099102642081 0.188 -0.413333333333333 7.63482401219088 28.0262204710966 0.188 -0.413333333333333 0.172392194756724 0.00157535324868833 1.57174049961738 -5.84488987277252 P46926 GNPDA1 P46926.S282.p_GNPDA1 P46926_S282s _1_1_282_282 P46926 P46926|P46926-2 Glucosamine-6-phosphate isomerase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7200.7200.3 7.56 7.56 7.56 5 1 1 0 632.0025 1814.0263 S282s TMT10 280 (K) SQsSKKPYSD (-) S(0.0)QS(0.99)S(0.0)KKPY(0.0)S(0.0)D K:TMT10,s:Phosphorylated S GNPDA1 32839.1 1 3 4121.1 37.16 HUMAN 1 7.6348 -28.0262 KETKGKGSLEVLNLK-p A0A087X020;S233-p KETKGKGSLEVLNLK 0.166211549723019 0.0144736864902432 -0.354 0.513666666666667 15.5917484836045 25.4935425187259 -0.354 0.513666666666667 0.0275946666236355 0.00282257667373922 -2.99018843314953 5.163260960394 A0A087X020 NotFound A0A087X020.S233.p_NotFound A0A087X020_S233s _1_1_233_233 A0A087X020 Q9Y3A5|A0A087X020 Ribosome maturation protein SBDS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20717.20717.3 7.14 7.14 99 1 1 1 0 642.3857 1845.1776 S233s TMT10 230 (K) GKGsLEVLNLK (D) GKGS(1.0)LEVLNLK K:TMT10,s:Phosphorylated S SBDS 29149.4 2 4 3987.1 39.67 HUMAN 1 -15.5917 25.4935 KETPAAQSPTRGPSD-p A0A087X1R1;S331-p KETPAAQSPTRGPSD 0.120014369208718 0.00299203848588779 -0.325 -0.938333333333333 19.1416684215057 37.9149382949515 -0.325 -0.938333333333333 0.0121852139176628 0.000161624118968011 -3.69711641678869 -9.23194504170955 A0A087X1R1 SMTN A0A087X1R1.S331.p_SMTN A0A087X1R1_S331s _1_1_331_331 A0A087X1R1 A0A087X1R1|A0A087WVP4|P53814-6|P53814-5 Smoothelin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13251.13251.4 15.84 15.84 1.819 6 1 1 0 752.1639 2925.6612 S331s TMT10 319 (K) LLSGPKETPAAQsPTRGPSDTK (R) LLS(0.0)GPKET(0.0)PAAQS(0.99)PT(0.0)RGPS(0.0)DT(0.0)K K:TMT10,s:Phosphorylated S SMTN 108527.2 3 4 826.1 217.61 HUMAN 1 -19.1417 -37.9149 KETQKSIYYITGESK-p P08238;Y484-p KETQKSIYYITGESK 0.750432115138086 0.19200246734325 -0.0523333333333333 -0.137333333333333 2.37439053759753 9.42214348242297 -0.0523333333333333 -0.137333333333333 0.578843213977809 0.114231440057393 -0.590205036588325 -1.88075519281706 P08238 HSP90AB1 P08238.Y484.p_HSP90AB1 P08238_Y484y _1_1_484_484 P08238 P08238|Q58FF8 Heat shock protein HSP 90-beta GG20160819_MSz_CCLE_T4D7_pY_Injection_01.21714.22326.2 15.95 15.95 2.577 5 1 1 0 849.9434 1618.9092 Y484y TMT10 482 (K) SIyYITGESK (E) S(0.0)IY(0.99)Y(0.0)IT(0.0)GES(0.0)K K:TMT10,y:Phosphorylated Y HSP90AB1 83605 1 6 3.2 124.79 HUMAN 1 -2.3744 -9.4221 KETRRRLSVEIYDKF-p O95069;S348-p KETRRRLSVEIYDKF 0.202846697385928 0.0946972902789807 -0.206666666666667 -0.200666666666667 13.4358923343737 13.5367047416382 -0.206666666666667 -0.200666666666667 0.0453326144382288 0.044292431871716 -2.58991708389244 -2.606741551062 O95069 KCNK2 O95069.S348.p_KCNK2 O95069_S348s _1_1_348_348 O95069 O95069|O95069-3|O95069-2 Potassium channel subfamily K member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14077.14077.2 12.38 6.58 6.718 2 1 1 0 716.3756 1351.7783 S348s Hydrogen 346 (R) RLsVEIYDK (F) RLS(0.99)VEIY(0.0)DK K:TMT10-Lys-Only,s:Phosphorylated S KCNK2 47377.1 6 2 1506.1 135.64 HUMAN 1 -13.4359 -13.5367 KETTSGTSTEPVKNS-p Q9NYV4-2;S1075-p KETTSGTSTEPVKNS 0.152381872383781 0.859056383778375 -0.362333333333333 -0.026 16.4427149560768 0.92970857172542 -0.362333333333333 -0.026 0.0226844630806456 0.807289200636709 -3.153664468276 -0.256127425129547 Q9NYV4 CDK12 Q9NYV4.2.S1075.p_CDK12 Q9NYV4-2_S1075s _1_1_1075_1075 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7724.7724.3 10.13 7.58 1.136 6 1 1 0 711.3879 2052.1792 S1075s TMT10 1068 (R) KETTSGTsTEPVK (N) KET(0.0)T(0.0)S(0.0)GT(0.0)S(0.99)T(0.0)EPVK K:TMT10,s:Phosphorylated S CDK12 163853.1 6 29 59.1 708.76 HUMAN 1 -16.4427 -0.9297 KETVFTKSPYQEFTD-p P15880;S264-p KETVFTKSPYQEFTD 0.321641349027733 0.858740289582643 -0.245 0.0183333333333334 9.21983374826835 0.931574270046922 -0.245 0.0183333333333334 0.119678634445988 0.80694246939829 -1.84642402042566 0.256600325719521 P15880 RPS2 P15880.S264.p_RPS2 P15880_S264s _1_1_264_264 P15880 P15880|E9PQD7 40S ribosomal protein S2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20871.20871.3 16.15 16.15 4.674 3 1 1 0 668.0098 1922.0424 S264s TMT10 264 (K) sPYQEFTDHLVK (T) S(0.99)PY(0.0)QEFT(0.0)DHLVK K:TMT10,s:Phosphorylated S RPS2 31609.1 3 5 1346.1 151.14 HUMAN 1 -9.2198 0.9316 KEVDYSDSLTEKQWL-p A0A0A0MT49;S1413-p KEVDYSDSLTEKQWL 0.314261017019207 0.229063253598673 -0.361 -0.160666666666667 9.405988625377 8.43186062652288 -0.361 -0.160666666666667 0.114657148686102 0.14348745653865 -1.87866780361135 -1.70943392599113 A0A0A0MT49 NotFound A0A0A0MT49.S1413.p_NotFound A0A0A0MT49_S1413s _1_1_1413_1413 A0A0A0MT49 A0A0A0MT49|Q9HBD4|P51532|P51532-4|P51532-3|P51532-2|P51532-5 Transcription activator BRG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13163.13163.3 16.68 16.68 1.253 4 1 1 0 727.7159 2101.1632 S1413s TMT10 1406 (R) KEVDYSDsLTEK (Q) KEVDY(0.0)S(0.0)DS(0.99)LT(0.0)EK K:TMT10,s:Phosphorylated S SMARCA4 189484.7 6 9 392.1 331.85 HUMAN 1 -9.406 -8.4319 KEVEDKESEGEEEDE-p O95218-2;S153-p KEVEDKESEGEEEDE 0.620099263422354 0.0697170840752109 -0.0866666666666667 0.219 3.85722391826101 15.3804841380613 -0.0866666666666667 0.219 0.411412618782059 0.0289702061879804 -0.889737550624496 2.94813664464352 O95218 ZRANB2 O95218.2.S153.p_ZRANB2 O95218-2_S153s _1_1_153_153 O95218-2 O95218|O95218-2 Isoform 2 of Zinc finger Ran-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12248.12880.3 22.43 22.43 11.215 2 1 1 0 1036.4707 3027.4257 S153s TMT10 147 (K) EVEDKEsEGEEEDEDEDLSK (Y) EVEDKES(0.99)EGEEEDEDEDLS(0.0)K K:TMT10,s:Phosphorylated S ZRANB2 36774.1 11 2 212.1 438.05 HUMAN 1 -3.8572 15.3805 KEVEKRDSDIQQLQK-p Q9NPJ6;S105-p KEVEKRDSDIQQLQK 0.468467993613407 0.025983540595186 -0.129666666666667 -0.297 6.08071609325251 21.5568429348776 -0.129666666666667 -0.297 0.246563275400023 0.00698740162448081 -1.29892974581564 -4.21697566615537 Q9NPJ6 MED4 Q9NPJ6.S105.p_MED4 Q9NPJ6_S105s _1_1_105_105 Q9NPJ6 Q9NPJ6|Q9NPJ6-2 Mediator of RNA polymerase II transcription subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11014.11014.3 9.76 9.76 99 1 1 1 0 828.4544 2403.3811 S105s TMT10 99 (K) EVEKRDsDIQQLQK (Q) EVEKRDS(1.0)DIQQLQK K:TMT10,s:Phosphorylated S MED4 29802 2 2 4883.1 25.49 HUMAN 1 -6.0807 -21.5568 KEVESRLSPGESAYQ-p A0A0G2JHC2;S224-p KEVESRLSPGESAYQ 0.123401035738524 0.00450425450022026 -0.326333333333333 -0.546 18.9074216436898 34.4178054864816 -0.326333333333333 -0.546 0.0128604994638245 0.000361592531146735 -3.64829532007791 -7.88232823913925 A0A0G2JHC2 NotFound A0A0G2JHC2.S224.p_NotFound A0A0G2JHC2_S224s _1_1_224_224 A0A0G2JHC2 Q6NYC8|A0A0G2JHC2|Q6NYC8-2 PPP1R18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11292.11292.3 14.55 9.6 1.872 4 1 1 0 740.0438 2138.1494 S224s TMT10 218 (K) EVESRLsPGESAYQK (L) EVES(0.0)RLS(0.99)PGES(0.0)AY(0.0)QK K:TMT10,s:Phosphorylated S PPP1R18 68325.8 5 6 1213.1 166.15 HUMAN 1 -18.9074 -34.4178 KEVKEEGSPDSYELS-p P13631;S176-p KEVKEEGSPDSYELS 0.708423821349967 0.0902250112137905 0.053 0.281666666666667 2.8137180973818 13.8232168054068 0.053 0.281666666666667 0.523152361746749 0.0414646801295888 0.682315536369708 2.65894714034516 P13631 RARG P13631.S176.p_RARG P13631_S176s _1_1_176_176 P13631 P13631|P13631-2|P13631-4|P13631-3 Retinoic acid receptor gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28374.28374.4 17.46 17.46 1.28 5 1 1 0 847.6914 3307.7764 S176s TMT10 170 (K) EVKEEGsPDSYELSPQLEELITK (V) EVKEEGS(0.99)PDS(0.0)Y(0.0)ELS(0.0)PQLEELIT(0.0)K K:TMT10,s:Phosphorylated S RARG 51196.9 2 2 3713.1 44.71 HUMAN 1 2.8137 13.8232 KEVKNEESEKEDA__-p Q9BYD6;S320-p KEVKNEESEKEDA__ 0.915699707666143 0.00982342676371812 0.0176666666666667 0.463666666666667 0.749120012364961 28.2582301348909 0.0176666666666667 0.463666666666667 0.841565646307388 0.00149340288683933 0.209707131312927 5.9105393679982 Q9BYD6 MRPL1 Q9BYD6.S320.p_MRPL1 Q9BYD6_S320s _1_1_320_320 Q9BYD6 Q9BYD6 39S ribosomal protein L1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7667.7667.2 14.55 14.55 99 1 1 1 0 1087.5438 2094.117 S320s TMT10 314 (K) EVKNEEsEKEDA (-) EVKNEES(1.0)EKEDA K:TMT10,s:Phosphorylated S MRPL1 37136.3 2 4 3170.1 58.78 HUMAN 1 0.7491 28.2582 KEVKRKRSHPELENV-p Q9NSI6-2;S2131-p KEVKRKRSHPELENV 0.443553897142878 0.191485348462373 -0.121333333333333 0.153333333333333 6.50648949588532 9.44182782350022 -0.121333333333333 0.153333333333333 0.223537840151281 0.113714859119138 -1.37431903699203 1.88416294409126 Q9NSI6 BRWD1 Q9NSI6.2.S2131.p_BRWD1 Q9NSI6-2_S2131s _1_1_2131_2131 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9786.9786.3 14.51 14.51 99 1 1 1 0 530.9495 1510.863 S2131s TMT10 2131 (R) sHPELENVK (I) S(1.0)HPELENVK K:TMT10,s:Phosphorylated S BRWD1 259915.1 2 25 208.1 444.81 HUMAN 1 -6.5065 9.4418 KEVKSKLSNPEKKGG-p Q9Y2I1;S467-p KEVKSKLSNPEKKGG 0.153398497348319 0.856030800980723 -0.297666666666667 -0.0303333333333333 16.3638357737119 0.952124359792913 -0.297666666666667 -0.0303333333333333 0.0231002363091084 0.803133171954893 -3.13836599096999 -0.261800211859817 Q9Y2I1 NISCH Q9Y2I1.S467.p_NISCH Q9Y2I1_S467s _1_1_467_467 Q9Y2I1 Q9Y2I1|Q9Y2I1-3|C9J715|Q9Y2I1-4 Nischarin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8093.8093.3 8.21 8.21 2.972 2 1 1 0 557.3196 1589.983 S467s TMT10 464 (K) SKLsNPEK (K) S(0.0)KLS(0.99)NPEK K:TMT10,s:Phosphorylated S NISCH 168394.3 2 3 2683.1 74.06 HUMAN 1 -16.3638 -0.9521 KEVLDEDTDEEKETL-p Q9Y3P9;T996-p KEVLDEDTDEEKETL 0.294539202778008 0.039999229033491 -0.318333333333333 -0.257333333333333 10.0193035509878 18.7445556049083 -0.318333333333333 -0.257333333333333 0.0995565056660185 0.0133519420732295 -1.98506434663799 -3.61143601778044 Q9Y3P9 RABGAP1 Q9Y3P9.T996.p_RABGAP1 Q9Y3P9_T996t _1_1_996_996 Q9Y3P9 Q9Y3P9 Rab GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16517.16517.3 20.06 20.06 7.359 2 1 1 0 854.101 2480.3223 T996t TMT10 990 (K) EVLDEDtDEEKETLK (N) EVLDEDT(0.99)DEEKET(0.0)LK K:TMT10,t:Phosphorylated T RABGAP1 122989.9 10 12 520.1 284.17 HUMAN 1 -10.0193 -18.7446 KEVPRRKSLVGTPYW-p O96013;S474-p KEVPRRKSLVGTPYW 0.712007067173633 0.41570727607594 -0.05 0.0766666666666667 2.77544163006295 5.07085927156715 -0.05 0.0766666666666667 0.527783534230655 0.311110073064781 -0.674420859514704 1.11679928737852 O96013 PAK4 O96013.S474.p_PAK4 O96013_S474s _1_1_474_474 O96013 O96013|O96013-4|O96013-3|O96013-2 Serine/threonine-protein kinase PAK 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33326.33937.3 25.21 25.21 5.932 4 1 1 0 710.361 2049.1041 S474s TMT10 474 (K) sLVGTPYWMAPELISR (L) S(0.99)LVGT(0.0)PY(0.0)WMAPELIS(0.0)R s:Phosphorylated S PAK4 64356.2 43 9 573.1 269.06 HUMAN 1 -2.7754 5.0709 KEVTRKLSEADNRKM-p Q9UNL2-2;S105-p KEVTRKLSEADNRKM 0.296077692655468 0.454105483651629 -0.155 0.139666666666667 9.95358576000643 4.57018011776741 -0.155 0.139666666666667 0.101074458661179 0.34912583565609 -1.97364782257168 1.02447513664476 Q9UNL2 SSR3 Q9UNL2.2.S105.p_SSR3 Q9UNL2-2_S105s _1_1_105_105 Q9UNL2-2 Q9UNL2-2|C9JA28|C9J365 Isoform 2 of Translocon-associated protein subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5744.5744.2 11.54 6.26 99 1 1 1 0 735.8897 1390.8054 S105s TMT10 103 (R) KLsEADNR (K) KLS(1.0)EADNR K:TMT10,s:Phosphorylated S SSR3 22666.9 7 2 3200.1 57.73 HUMAN 1 -9.9536 4.5702 KEVVKSHSPEEMAKT-p Q7L211;S323-p KEVVKSHSPEEMAKT 0.892659613141172 0.825533350414788 0.0236666666666667 -0.024 0.965358540934633 1.16578169823571 0.0236666666666667 -0.024 0.800689523172067 0.76457805760656 0.26516626632192 -0.314929446676503 Q7L211 ABHD13 Q7L211.S323.p_ABHD13 Q7L211_S323s _1_1_323_323 Q7L211 Q7L211 Protein ABHD13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6086.6086.2 10.4 5.1 3.086 2 1 1 0 777.3735 1473.7772 S323s TMT10 321 (K) SHsPEEMAK (T) S(0.0)HS(0.99)PEEMAK K:TMT10,s:Phosphorylated S ABHD13 38775.6 1 1 6641.1 10.4 HUMAN 1 0.9654 -1.1658 KEVYLSGSFNNWSKL-p Q9Y478;S96-p KEVYLSGSFNNWSKL 0.18567894610188 0.134262277374679 -0.482333333333333 -0.174 14.3698251693237 11.4932006584861 -0.482333333333333 -0.174 0.0365609509385027 0.0709055016806643 -2.76107556722449 -2.24168789885741 Q9Y478 PRKAB1 Q9Y478.S96.p_PRKAB1 Q9Y478_S96s _1_1_96_96 Q9Y478 Q9Y478 5'-AMP-activated protein kinase subunit beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25050.25050.3 16.53 16.53 1.244 4 1 1 0 690.3443 1989.0482 S96s TMT10 90 (K) EVYLSGsFNNWSK (L) EVY(0.0)LS(0.0)GS(0.99)FNNWS(0.0)K K:TMT10,s:Phosphorylated S PRKAB1 30552.9 2 2 1669.1 122.33 HUMAN 1 -14.3698 -11.4932 KEWNGVVSESDSPVK-p P18858;S47-p KEWNGVVSESDSPVK 0.331071537910901 0.00219928027114295 -0.135 -0.8 8.9704885700057 41.2557478999342 -0.135 -0.8 0.12675092663385 7.48902378683996e-05 -1.80325416597721 -10.710856533081 P18858 LIG1 P18858.S47.p_LIG1 P18858_S47s _1_1_47_47 P18858 P18858|P18858-3|F5GZ28|P18858-2|M0R0Q7|B4E135 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19324.19324.3 14.16 13.86 1.484 3 1 1 0 691.0092 1991.0486 S47s TMT10 41 (K) EWNGVVsESDSPVK (R) EWNGVVS(0.99)ES(0.0)DS(0.0)PVK K:TMT10,s:Phosphorylated S LIG1 102361.8 8 2 302.1 376.44 HUMAN 1 -8.9705 -41.2557 KEYEQELSDDLHVER-p Q7Z7F7-2;S147-p KEYEQELSDDLHVER 0.55876283968831 0.0201264196371064 -0.135333333333333 0.377 4.66599735654941 23.239223420637 -0.135333333333333 0.377 0.341507514536531 0.00474326793951936 -1.04247873775488 4.60598026626171 Q7Z7F7 MRPL55 Q7Z7F7.2.S147.p_MRPL55 Q7Z7F7-2_S147s _1_1_147_147 Q7Z7F7-2 Q7Z7F7-2|X6R631 Isoform 2 of 39S ribosomal protein L55, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16939.16939.3 17.24 17.24 8.151 2 1 1 0 690.9804 1990.9555 S147s TMT10 141 (K) EYEQELsDDLHVER (Y) EY(0.0)EQELS(0.99)DDLHVER s:Phosphorylated S MRPL55 19016.4 1 2 4374.1 32.53 HUMAN 1 -4.666 23.2392 KEYSENKSFCEDLTE-p O95749;S203-p KEYSENKSFCEDLTE 0.152381872383781 0.0133509951211447 -0.749 0.469666666666667 16.43760364753 26.0705728164182 -0.749 0.469666666666667 0.0227111766476163 0.00247139815634656 -3.15267221381147 5.31312626854643 O95749 GGPS1 O95749.S203.p_GGPS1 O95749_S203s _1_1_203_203 O95749 O95749|O95749-2 Geranylgeranyl pyrophosphate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18614.18614.3 11.29 11.29 5.892 2 1 1 0 575.2734 1643.8351 S203s TMT10 203 (K) sFCEDLTEGK (F) S(0.99)FCEDLT(0.0)EGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GGPS1 35041.4 1 1 6506.1 11.29 HUMAN 1 -16.4376 26.0706 KEYTSWKSPAKKLTN-p Q9Y4J8-15;S294-p KEYTSWKSPAKKLTN 0.280077224788279 0.00453802773854958 -0.248 -0.688333333333333 10.4454677655549 34.3669904604006 -0.248 -0.688333333333333 0.0902512495323084 0.000365848226405766 -2.05922101686634 -7.86406405638832 Q9Y4J8 DTNA Q9Y4J8.15.S294.p_DTNA Q9Y4J8-15_S294s _1_1_294_294 Q9Y4J8-15 Q9Y4J8|Q9Y4J8-15|Q9Y4J8-14|Q9Y4J8-2|Q9Y4J8-13|Q9Y4J8-3|Q9Y4J8-4 Isoform 15 of Dystrobrevin alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14043.14043.4 13.02 13.02 2.725 4 1 1 0 491.769 1884.0834 S294s TMT10 288 (K) EYTSWKsPAK (K) EY(0.0)T(0.0)S(0.0)WKS(0.99)PAK K:TMT10,s:Phosphorylated S DTNA 83008.6 3 11 792.1 224.62 HUMAN 1 -10.4455 -34.367 KFALKVDSPDVKRCL-p Q7Z4V5-4;S490-p KFALKVDSPDVKRCL 0.421053324853859 0.0151617863601756 0.165 -0.422666666666667 6.92468533477682 25.1682644884501 0.165 -0.422666666666667 0.203016560885087 0.00304210045574278 1.44782323296707 -5.08012329211294 Q7Z4V5 HDGFRP2 Q7Z4V5.4.S490.p_HDGFRP2 Q7Z4V5-4_S490s _1_1_490_490 Q7Z4V5-4 Q7Z4V5-3|Q7Z4V5-4|Q7Z4V5-2 Isoform 4 of Hepatoma-derived growth factor-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16499.16499.4 11.52 8.64 99 1 1 1 0 536.3127 2062.2628 S490s TMT10 484 (K) FALKVDsPDVKR (C) FALKVDS(1.0)PDVKR K:TMT10,s:Phosphorylated S HDGFL2 74899.1 7 10 712.1 238.42 HUMAN 1 6.9247 -25.1683 KFARSLQSVAEERAG-p P61313;S100-p KFARSLQSVAEERAG 0.660414873314641 0.0645385418148739 -0.0606666666666667 0.211666666666667 3.37319634080509 15.843239418731 -0.0606666666666667 0.211666666666667 0.4599179564232 0.0260421033516591 -0.795244852167259 3.036028891777 P61313 RPL15 P61313.S100.p_RPL15 P61313_S100s _1_1_100_100 P61313 P61313|P61313-2 60S ribosomal protein L15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11910.11910.2 11.54 7.11 3.592 2 1 1 0 664.3269 1247.6793 S100s TMT10 97 (R) SLQsVAEER (A) S(0.0)LQS(0.99)VAEER s:Phosphorylated S RPL15 24259.7 1 2 3377.1 52.5 HUMAN 1 -3.3732 15.8432 KFDFQAQSPKELTLQ-p O60504-2;S53-p KFDFQAQSPKELTLQ 0.0444873405743474 0.0132636674348151 -0.639333333333333 -0.396333333333333 30.0327494587634 26.1186446110379 -0.639333333333333 -0.396333333333333 0.000992487519257547 0.0024441932415565 -6.44209384944027 -5.3257512468791 O60504 SORBS3 O60504.2.S53.p_SORBS3 O60504-2_S53s _1_1_53_53 O60504-2 O60504|O60504-2 Isoform Beta of Vinexin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19039.19039.2 10.39 6.55 99 1 1 1 0 803.4078 1525.8415 S53s TMT10 47 (K) FDFQAQsPK (E) FDFQAQS(1.0)PK K:TMT10,s:Phosphorylated S SORBS3 36912.6 4 5 1539.1 133.11 HUMAN 1 -30.0327 -26.1186 KFDSSLLSSDDETKC-p R4GMW8;S1016-p KFDSSLLSSDDETKC 0.299833271733525 0.012760043531562 -0.308666666666667 0.429666666666667 9.83390625068315 26.4000340064294 -0.308666666666667 0.429666666666667 0.103898523280268 0.00229084971472632 -1.95286822984552 5.40009031439177 R4GMW8 NotFound R4GMW8.S1016.p_NotFound R4GMW8_S1016sS1017s_2_2_1016_1017 R4GMW8 R4GMW8|A0A1W2PS85|P28715 BIVM-ERCC5 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24076.24278.3 10.49 9.14 4.532 5 2 2 0 687.9746 1901.9744 S1016s S1017s TMT10 1010 (K) FDSSLLssDDETK (C) FDS(0.0)S(0.0)LLS(0.99)S(0.99)DDET(0.0)K K:TMT10,s:Phosphorylated S BIVM-ERCC5 185876.1 6 17 561.1 271.77 HUMAN 1 -9.8339 26.4 KFDTRRFSADAARFQ-p Q9Y2R4;S22-p KFDTRRFSADAARFQ 0.505689515077119 0.109782997051222 -0.154333333333333 0.178666666666667 5.46614088406499 12.6717916030647 -0.154333333333333 0.178666666666667 0.284044190780625 0.054053129057098 -1.18883659009978 2.45078603944831 Q9Y2R4 DDX52 Q9Y2R4.S22.p_DDX52 Q9Y2R4_S22s _1_1_22_22 Q9Y2R4 Q9Y2R4|A0A087X069|A0A087WTD6|A0A087X1P7 Probable ATP-dependent RNA helicase DDX52 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5240.5240.3 10.23 6.54 99 1 1 1 0 401.5343 1122.6217 S22s TMT10 20 (R) RFsADAAR (F) RFS(1.0)ADAAR s:Phosphorylated S DDX52 67839.2 2 1 4189.1 35.66 HUMAN 1 -5.4661 12.6718 KFDYMGRSPRELSFK-p O43295;S759-p KFDYMGRSPRELSFK 0.0198229955984014 0.00853775654306555 -0.747333333333333 -0.552 39.7863976352592 29.3564178073929 -0.747333333333334 -0.552 0.000105041335915785 0.00115973354515652 -10.0587814339162 -6.22908143359588 O43295 SRGAP3 O43295.S759.p_SRGAP3 O43295_S759s _1_1_759_759 O43295 O43295|O43295-2 SLIT-ROBO Rho GTPase-activating protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11410.11410.3 10.75 10.75 6.816 2 1 1 0 479.8903 1357.6884 S759s TMT10 753 (K) FDYMGRsPR (E) FDY(0.0)MGRS(0.99)PR s:Phosphorylated S SRGAP3 125471.5 3 4 754.1 231.27 HUMAN 1 -39.7864 -29.3564 KFFGAENSVNLKDIW-p O14832;S317-p KFFGAENSVNLKDIW 0.476013173763736 0.0312466807474374 -0.126666666666667 0.278333333333333 5.93705989774463 20.3350090259714 -0.126666666666667 0.278333333333333 0.254855499854901 0.00925761461102559 -1.27334320374025 3.94744560893774 O14832 PHYH O14832.S317.p_PHYH O14832_S317s _1_1_317_317 O14832 O14832|B1ALH6|O14832-2 Phytanoyl-CoA dioxygenase, peroxisomal HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24373.24373.2 12.2 12.2 99 1 1 1 0 882.4625 1683.947 S317s TMT10 311 (K) FFGAENsVNLK (D) FFGAENS(1.0)VNLK K:TMT10,s:Phosphorylated S PHYH 38937 3 3 5022.1 23.79 HUMAN 1 -5.9371 20.335 KFGDMRNSPTFKSFE-p E9PPQ1;S131-p KFGDMRNSPTFKSFE 0.637330335264868 0.855056163527425 0.0656666666666667 -0.0206666666666666 3.6493101340586 0.958642215648178 0.0656666666666667 -0.0206666666666666 0.431587628000186 0.80192874032436 0.849471825213844 -0.263446039407539 E9PPQ1 TPD52L1 E9PPQ1.S131.p_TPD52L1 E9PPQ1_S131s _1_1_131_131 E9PPQ1 E9PPQ1 Tumor protein D53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13765.13786.4 9.96 6.92 1.424 2 1 1 0 549.5471 2115.1988 S131s TMT10 124 (K) KFGDMRNsPTFK (S) KFGDMRNS(0.99)PT(0.0)FK K:TMT10,s:Phosphorylated S TPD52L1 21044 3 1 793.4 224.4 HUMAN 1 3.6493 -0.9586 KFGFAIGSQTTKKAS-p Q8WW12;S77-p KFGFAIGSQTTKKAS 0.115332144654924 0.150081517973712 0.303 0.148666666666667 19.5111100122584 10.8390035973551 0.303 0.148091811095563 0.0111915180315947 0.0824327218867642 3.77480598890374 2.12698459647573 Q8WW12 PCNP Q8WW12.S77.p_PCNP Q8WW12_S77s _1_1_77_77 Q8WW12 Q8WW12|Q8WW12-2 PEST proteolytic signal-containing nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23964.23964.3 7.5 7.5 1.647 3 1 1 0 565.6372 1614.9256 S77s TMT10 71 (K) FGFAIGsQTTK (K) FGFAIGS(0.99)QT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S PCNP 18924.5 1 3 1455.1 140.6 HUMAN 1 19.5111 10.839 KFGFGAKSPKADIKS-p Q09666;S4986-p KFGFGAKSPKADIKS 0.358160899463675 0.00320806805612606 -0.152 -0.639 8.28388453766031 37.4095321618943 -0.152 -0.639 0.14846071445696 0.000181571124738085 -1.68437454301741 -9.0250709684967 Q09666 AHNAK Q09666.S4986.p_AHNAK Q09666_S4986s _1_1_4986_4986 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18026.18026.3 11.4 7.67 99 1 1 1 0 788.1286 2282.4042 S4986s TMT10 4980 (K) FGFGAKsPKADIK (S) FGFGAKS(1.0)PKADIK K:TMT10,s:Phosphorylated S AHNAK 629603.7 9 112 1.1 4313.36 HUMAN 1 -8.2839 -37.4095 KFGFIVGSQGAEGAL-p Q9BXI6;S64-p KFGFIVGSQGAEGAL 0.724037972505255 0.597060826374165 -0.087 0.241 2.65442522736764 3.03231354065789 -0.087 0.241 0.542697070520021 0.49747200486234 -0.649303557031781 0.726865283889137 Q9BXI6 TBC1D10A Q9BXI6.S64.p_TBC1D10A Q9BXI6_S64s _1_1_64_64 Q9BXI6 Q9BXI6 TBC1 domain family member 10A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37504.37504.3 16.52 16.52 99 1 1 1 0 909.4728 2646.434 S64s TMT10 58 (K) FGFIVGsQGAEGALEEVPLEVLR (Q) FGFIVGS(1.0)QGAEGALEEVPLEVLR s:Phosphorylated S TBC1D10A 57630.1 1 3 1460.1 140.31 HUMAN 1 -2.6544 3.0323 KFIEFEDSQEQEKKD-p O60271;S109-p KFIEFEDSQEQEKKD 0.222409462668413 0.936575483423398 -0.215666666666667 0.00933333333333335 12.5609557909798 0.401812583892322 -0.215666666666667 0.00933333333333336 0.0554503664912782 0.911630279320399 -2.43224623358373 0.116261296475979 O60271 SPAG9 O60271.S109.p_SPAG9 O60271_S109s _1_1_109_109 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-3|O60271-5 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20095.20095.3 17.06 17.06 99 1 1 1 0 808.7478 2344.264 S109s TMT10 103 (K) FIEFEDsQEQEKK (D) FIEFEDS(1.0)QEQEKK K:TMT10,s:Phosphorylated S SPAG9 147001.6 5 11 84.1 629.25 HUMAN 1 -12.561 0.4018 KFISKTPSKEEIEKE-p B5MCU0;S37-p KFISKTPSKEEIEKE 0.049158581421578 0.0194802086299571 -0.934333333333333 0.337666666666667 28.9683379571496 23.485476161759 -0.934333333333333 0.337666666666667 0.00126813708844597 0.00448179908724521 -6.12427643676039 4.66477278415386 B5MCU0 NotFound B5MCU0.S37.p_NotFound B5MCU0_S37s _1_1_37_37 B5MCU0 B5MCG9|B5MCU0 R3H domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16207.16207.4 10.83 10.83 1.101 3 1 1 0 633.8683 2452.4833 S37s TMT10 31 (K) FISKTPsKEEIEK (E) FIS(0.0)KT(0.0)PS(0.99)KEEIEK K:TMT10,s:Phosphorylated S R3HDM2 109377.4 2 1 761.1 230.16 HUMAN 1 -28.9683 23.4855 KFKEECKSPKAECWS-p Q8IZH2;S1299-p KFKEECKSPKAECWS 0.250269511293904 0.162936937377694 -0.219333333333333 -0.277666666666667 11.484702546929 10.3599221800545 -0.219333333333333 -0.277666666666667 0.0710443827416366 0.0920466065164951 -2.24125414280363 -2.04345643453547 Q8IZH2 XRN1 Q8IZH2.S1299.p_XRN1 Q8IZH2_S1299s _1_1_1299_1299 Q8IZH2 Q8IZH2|Q8IZH2-2 5'-3' exoribonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11075.11075.3 11.04 5.22 4.973 2 1 1 0 663.3472 1908.0616 S1299s TMT10 1299 (K) sPKAECWSQK (M) S(0.99)PKAECWS(0.0)QK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S XRN1 195644.2 2 4 2073.1 99.19 HUMAN 1 -11.4847 -10.3599 KFKGRLKSISREPSP-p Q9BRZ2;S469-p KFKGRLKSISREPSP 0.212702492337707 0.89086011292226 0.249 -0.015 12.9721867957976 0.704480257146612 0.249 -0.015 0.0504407250263228 0.850260442199818 2.50605633826181 -0.197995262291035 Q9BRZ2 TRIM56 Q9BRZ2.S469.p_TRIM56 Q9BRZ2_S469sS471sS475s_3_3_469_475 Q9BRZ2 Q9BRZ2 E3 ubiquitin-protein ligase TRIM56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32696.32696.5 13.96 13.56 13.058 7 3 3 0 889.0454 4201.2996 S469s S471s S475s TMT10 467 (R) LKsIsREPsPALGPNLDGSGLLPRPIFYCSFPTR (M) LKS(0.99)IS(0.99)REPS(0.99)PALGPNLDGS(0.0)GLLPRPIFY(0.0)CS(0.0)FPT(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TRIM56 83197.9 2 7 1098.1 178.07 HUMAN 1 12.9722 -0.7045 KFKKLENSPLGEALR-p Q9NX40;S108-p KFKKLENSPLGEALR 0.53176667064902 0.355410892478195 0.0873333333333333 -0.114 5.07547058059115 5.95867474223404 0.0873333333333333 -0.114 0.310779913834283 0.253590234780417 1.11787067646207 -1.27689651366092 Q9NX40 OCIAD1 Q9NX40.S108.p_OCIAD1 Q9NX40_S108s _1_1_108_108 Q9NX40 Q9NX40|D6RBN5|Q9NX40-4|Q9NX40-2|Q9NX40-3|D6RIV2 OCIA domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19206.19206.2 14.68 8.58 99 1 1 1 0 754.3891 1427.8056 S108s TMT10 105 (K) LENsPLGEALR (S) LENS(1.0)PLGEALR s:Phosphorylated S OCIAD1 27796.8 5 1 2651.1 75.21 HUMAN 1 5.0755 -5.9587 KFKKPEGSWDCELCL-p P49790-3;S885-p KFKKPEGSWDCELCL 0.998180995519267 0.878831313451584 -0.000333333333333334 -0.017 0.0129168068533405 0.787620120756924 -0.00033333333333333 -0.017 0.997030213874155 0.834138156639488 -0.00389709547708793 -0.219701488086122 P49790 NUP153 P49790.3.S885.p_NUP153 P49790-3_S885s _1_1_885_885 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22650.22650.4 11.55 11.55 99 1 1 1 0 809.4264 3154.7199 S885s TMT10 879 (K) FKKPEGsWDCELCLVQNK (A) FKKPEGS(1.0)WDCELCLVQNK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NUP153 158989.2 1 34 64.1 696.53 HUMAN 1 -0.0129 -0.7876 KFKLLFQSYNVNDWL-p Q13772-4;S350-p KFKLLFQSYNVNDWL 0.0258916763087389 0.0156099910196863 -0.931333333333333 -0.529666666666667 36.8207243737746 24.9758034806049 -0.931333333333334 -0.529666666666667 0.000207934983671214 0.00317994531779784 -8.80753687158665 -5.03137927744673 Q13772 NCOA4 Q13772.4.S350.p_NCOA4 Q13772-4_S350s _1_1_350_350 Q13772-4 Q13772-4|Q13772-3|B4DF87|B4DZ85 Isoform 4 of Nuclear receptor coactivator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.36676.36676.3 20.58 19.5 5.039 2 1 1 0 759.7458 2197.2421 S350s TMT10 346 (K) LLFQsYNVNDWLVK (T) LLFQS(0.99)Y(0.0)NVNDWLVK K:TMT10,s:Phosphorylated S NCOA4 74959.5 1 3 2373.1 86.26 HUMAN 1 -36.8207 -24.9758 KFKMPFLSISSPKVS-p Q09666;S3409-p KFKMPFLSISSPKVS 0.303423649713577 0.206941389049464 0.159333333333333 0.143666666666667 9.70381837041449 8.99940964924941 0.159333333333333 0.143666666666667 0.107057762633511 0.125909655329109 1.93029639738699 1.80761046010233 Q09666 AHNAK Q09666.S3409.p_AHNAK Q09666_S3409s _1_1_3409_3409 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.28797.28797.3 7.66 7.66 1.333 3 1 1 0 548.9665 1564.9173 S3409s TMT10 3405 (K) MPFLsISSPK (V) MPFLS(0.99)IS(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S AHNAK 629603.7 5 84 1.1 4313.36 HUMAN 1 9.7038 8.9994 KFKNEDLTDELSLNK-p P33981;T33-p KFKNEDLTDELSLNK 0.23797684518109 0.560352487396383 -0.27 -0.0986666666666667 11.9322976390192 3.3913290986414 -0.27 -0.0986666666666667 0.0640870433778659 0.458001700131714 -2.32033181617418 -0.798713337702618 P33981 TTK P33981.T33.p_TTK P33981_T33t _1_1_33_33 P33981 P33981|P33981-2|D6RFY1 Dual specificity protein kinase TTK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23227.23238.3 10.63 8.12 2.537 2 1 1 0 811.7678 2353.3218 T33t TMT10 27 (K) FKNEDLtDELSLNK (I) FKNEDLT(0.99)DELS(0.0)LNK K:TMT10,t:Phosphorylated T TTK 98040.5 2 2 1204.1 166.9 HUMAN 1 -11.9323 -3.3913 KFLESTDSFNNELKR-p Q969G3;S265-p KFLESTDSFNNELKR 0.0850162651149804 0.050722540706478 -0.378 -0.256 22.9021950797483 17.2967237357354 -0.378 -0.256 0.00512602230990374 0.018634924023338 -4.53134433047557 -3.3187232860493 Q969G3 SMARCE1 Q969G3.S265.p_SMARCE1 Q969G3_S265s _1_1_265_265 Q969G3 Q969G3|B4DGM3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25039.25039.3 13.63 9.25 2.648 3 1 1 0 694.6791 2002.0533 S265s TMT10 259 (K) FLESTDsFNNELK (R) FLES(0.0)T(0.0)DS(0.99)FNNELK K:TMT10,s:Phosphorylated S SMARCE1 46705.7 1 1 6146.1 13.63 HUMAN 1 -22.9022 -17.2967 KFLESYATDNEKMTS-p Q9BZI7;T169-p KFLESYATDNEKMTS 0.557118350649387 0.0739818594233017 -0.123666666666667 0.227 4.69034472611315 15.0080185744518 -0.123666666666667 0.227 0.339598315523588 0.0315644439139244 -1.04699383702255 2.87807590188231 Q9BZI7 UPF3B Q9BZI7.T169.p_UPF3B Q9BZI7_T169t _1_1_169_169 Q9BZI7 Q9BZI7|Q9BZI7-2|A0A087WYC8 Regulator of nonsense transcripts 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20029.20029.2 11.7 6.75 2.765 3 1 1 0 927.9481 1774.9264 T169t TMT10 163 (K) FLESYAtDNEK (M) FLES(0.0)Y(0.0)AT(0.99)DNEK K:TMT10,t:Phosphorylated T UPF3B 57875.1 2 1 2501.1 81.05 HUMAN 1 -4.6903 15.008 KFLIPNASQAESKVF-p P63104;S110-p KFLIPNASQAESKVF 0.388105146686967 0.0289654232096903 -0.136666666666667 0.333 7.60389942417131 20.8250034364158 -0.136666666666667 0.333 0.173624120007416 0.00826988854201191 -1.56636224790196 4.05428967013744 P63104 YWHAZ P63104.S110.p_YWHAZ P63104_S110s _1_1_110_110 P63104 P63104|P63104-2|B0AZS6 14-3-3 protein zeta/delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23731.23731.3 9.26 9.26 5.475 2 1 1 0 614.9977 1763.0104 S110s TMT10 104 (K) FLIPNAsQAESK (V) FLIPNAS(0.99)QAES(0.0)K K:TMT10,s:Phosphorylated S YWHAZ 27915.8 1 16 2349.1 87.09 HUMAN 1 -7.6039 20.825 KFLKFGMTPSKGVLF-p P55072;T509-p KFLKFGMTPSKGVLF 0.607070898135762 0.227344374739156 -0.0756666666666667 -0.142 4.01125587282999 8.47439384648995 -0.0756666666666667 -0.142 0.397076708047439 0.14208905155573 -0.919280567248876 -1.71679403564423 P55072 VCP P55072.T509.p_VCP P55072_T509t _1_1_509_509 P55072 P55072 Transitional endoplasmic reticulum ATPase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16501.16501.2 8.74 8.74 4.834 2 1 1 0 653.3372 1225.7015 T509t TMT10 506 (K) FGMtPSK (G) FGMT(0.99)PS(0.0)K K:TMT10,t:Phosphorylated T VCP 90004.9 1 9 803.1 222.64 HUMAN 1 -4.0113 -8.4744 KFLQEHGSDSFLAEH-p Q00688;S34-p KFLQEHGSDSFLAEH 0.915505457539644 0.0386745972221711 -0.0183333333333333 0.374666666666667 0.750709052975507 18.9719249880177 -0.0183333333333333 0.374666666666667 0.841257782075897 0.0126709011017648 -0.210121764962458 3.65850438663832 Q00688 FKBP3 Q00688.S34.p_FKBP3 Q00688_S34s _1_1_34_34 Q00688 Q00688 Peptidyl-prolyl cis-trans isomerase FKBP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17976.17976.4 18.01 18.01 1.188 2 1 1 0 571.5361 2203.1548 S34s TMT10 28 (K) FLQEHGsDSFLAEHK (L) FLQEHGS(0.99)DS(0.0)FLAEHK K:TMT10,s:Phosphorylated S FKBP3 25233.4 5 2 1207.1 166.76 HUMAN 1 -0.7507 18.9719 KFMEQSRSPSVSPSK-p Q96JG6;S494-p KFMEQSRSPSVSPSK 1 0.530162113227371 -4.62592926927149e-18 0.0836666666666667 0 3.70589718583768 0 0.0836666666666667 1 0.426000669282703 0 0.860338835963302 Q96JG6 VPS50 Q96JG6.S494.p_VPS50 Q96JG6_S494s _1_1_494_494 Q96JG6 Q96JG6|Q96JG6-3 Syndetin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12745.12745.5 16.68 16.68 1.117 9 1 1 0 630.534 3068.6653 S494s TMT10 488 (K) FMEQSRsPSVSPSKQPVSTSSK (T) FMEQS(0.0)RS(0.99)PS(0.0)VS(0.0)PS(0.0)KQPVS(0.0)T(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S VPS50 112027.8 10 2 1224.1 164.69 HUMAN 1 0 3.7059 KFNNDSHSPKVSSQN-p Q1RLN5;S165-p KFNNDSHSPKVSSQN 0.592323910889678 0.345696175589364 -0.118666666666667 0.102666666666667 4.19133541688964 6.11387875234483 -0.118666666666667 0.102666666666667 0.380948667056877 0.24468769213966 -0.953531365274471 1.30450896816703 Q1RLN5 ARHGAP12 Q1RLN5.S165.p_ARHGAP12 Q1RLN5_S165s _1_1_165_165 Q1RLN5 Q8IWW6|Q8IWW6-4|Q8IWW6-2|Q1RLN5|Q8IWW6-3 ARHGAP12 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6161.6161.2 10.72 4.9 2.497 2 1 1 0 792.3832 1503.7956 S165s TMT10 159 (K) FNNDSHsPK (V) FNNDS(0.0)HS(0.99)PK K:TMT10,s:Phosphorylated S ARHGAP12 91157.4 7 2 974.1 193.01 HUMAN 1 -4.1913 6.1139 KFNQHSVSYQDLTKN-p Q9BQK8-2;S464-p KFNQHSVSYQDLTKN 0.384388363979008 0.0546575861182109 -0.156 0.344333333333333 7.68874017109404 16.8275535085554 -0.156 0.344333333333333 0.170265235292799 0.0207608269837744 -1.58111419978792 3.22631940089049 Q9BQK8 LPIN3 Q9BQK8.2.S464.p_LPIN3 Q9BQK8-2_S464s _1_1_464_464 Q9BQK8-2 Q9BQK8-2 Isoform 2 of Phosphatidate phosphatase LPIN3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16024.16024.3 17.91 17.91 3.661 4 1 1 0 702.3522 2025.0806 S464s TMT10 458 (K) FNQHSVsYQDLTK (N) FNQHS(0.0)VS(0.99)Y(0.0)QDLT(0.0)K K:TMT10,s:Phosphorylated S LPIN3 94213.1 2 7 1554.1 131.9 HUMAN 1 -7.6887 16.8276 KFPLTTESAMKKIED-p A8MUS3;S123-p KFPLTTESAMKKIED 0.201147832961288 0.668684537466373 -0.494333333333333 0.0463333333333334 13.5314036196085 2.39152516077671 -0.494333333333333 0.0463333333333333 0.0443465294842776 0.576563949388115 -2.60727843364922 0.593788362096444 A8MUS3 NotFound A8MUS3.S123.p_NotFound A8MUS3_S123s _1_1_123_123 A8MUS3 A8MUS3|P62750 60S ribosomal protein L23a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23727.23727.3 10.97 9.99 1.599 3 1 1 0 554.9574 1582.8915 S123s TMT10 117 (K) FPLTTEsAMK (K) FPLT(0.0)T(0.0)ES(0.99)AMK K:TMT10,s:Phosphorylated S RPL23A 22029.9 2 3 4491.1 30.76 HUMAN 1 -13.5314 2.3915 KFPSPHPSPAKLKAT-p O14681;S330-p KFPSPHPSPAKLKAT 0.185184200992541 0.00488800200243423 -0.622 -1.05533333333333 14.4044178496552 33.7354098730396 -0.622 -1.05533333333333 0.0362708902326852 0.000423115575557168 -2.76747757659361 -7.64007447273831 O14681 EI24 O14681.S330.p_EI24 O14681_S330s _1_1_330_330 O14681 O14681|O14681-3|B7ZB74 Etoposide-induced protein 2.4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21199.21199.4 17.96 17.96 1.441 10 1 1 0 871.9662 3404.8669 S330s TMT10 308 (K) TVYLQSALSSSTSAEKFPSPHPsPAK (L) T(0.0)VY(0.0)LQS(0.0)ALS(0.0)S(0.0)S(0.0)T(0.0)S(0.0)AEKFPS(0.0)PHPS(0.99)PAK K:TMT10,s:Phosphorylated S EI24 39249.3 3 4 3055.1 62.02 HUMAN 1 -14.4044 -33.7354 KFRDRSFSENGDRSQ-p P47974;S125-p KFRDRSFSENGDRSQ 0.0247428091988012 0.310530965653686 -0.689 -0.145666666666667 37.2016918078409 6.71094200809994 -0.689 -0.145666666666667 0.00019047185842952 0.21325822944014 -8.9600296717468 -1.40994055336423 P47974 ZFP36L2 P47974.S125.p_ZFP36L2 P47974_S125s _1_1_125_125 P47974 P47974 mRNA decay activator protein ZFP36L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6420.6420.2 10.86 6.37 1.68 2 1 1 0 610.7615 1140.5483 S125s TMT10 123 (R) SFsENGDR (S) S(0.0)FS(0.99)ENGDR s:Phosphorylated S ZFP36L2 52031.8 5 2 1672.1 122.01 HUMAN 1 -37.2017 -6.7109 KFRHSAISPKSSLHR-p A0A0C4DGZ1;S59-p KFRHSAISPKSSLHR 0.849932017970877 0.00263377140296369 -0.036 -0.764666666666667 1.3671412083042 39.2512833735132 -0.036 -0.764666666666667 0.729937841842542 0.000118815106779835 -0.363595262573333 -9.79964390395137 A0A0C4DGZ1 NotFound A0A0C4DGZ1.S59.p_NotFound A0A0C4DGZ1_S59s _1_1_59_59 A0A0C4DGZ1 A0A0C4DGZ1|Q8N5P1 Zinc finger CCCH domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5954.5954.2 10.63 5.45 1.886 2 1 1 0 639.3539 1197.7356 S59s TMT10 55 (R) HSAIsPK (S) HS(0.0)AIS(0.99)PK K:TMT10,s:Phosphorylated S ZC3H8 34999.7 6 3 1997.1 103.4 HUMAN 1 -1.3671 -39.2513 KFRKIDYSWIAAL__-p Q8IWA0;S825-p KFRKIDYSWIAAL__ 0.256105749737423 0.217508398367341 -0.208 -0.576666666666667 11.23902992698 8.71855032126276 -0.208 -0.576666666666667 0.0751790800947496 0.134321325205917 -2.1980394374022 -1.75903230867995 Q8IWA0 WDR75 Q8IWA0.S825.p_WDR75 Q8IWA0_S825s _1_1_825_825 Q8IWA0 Q8IWA0 WD repeat-containing protein 75 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.37732.37732.2 7.29 7.29 7.293 2 1 1 0 680.8427 1280.7088 S825s TMT10 822 (K) IDYsWIAAL (-) IDY(0.0)S(0.99)WIAAL s:Phosphorylated S WDR75 95980.4 1 7 1418.1 144.36 HUMAN 1 -11.239 -8.7186 KFSRDRESRSPFLKP-p Q9H7N4;S872-p KFSRDRESRSPFLKP 0.527344543785721 0.300162551304717 -0.0853333333333333 0.157666666666667 5.14264556334615 6.89887995478966 -0.0853333333333333 0.157666666666667 0.306009876541479 0.20422645766702 -1.13013554384051 1.44290793200543 Q9H7N4 SCAF1 Q9H7N4.S872.p_SCAF1 Q9H7N4_S872sS874s_2_2_872_874 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8344.8344.4 8.67 8.67 99 2 2 2 0 530.9995 1961.0402 S872s S874s Hydrogen 869 (R) DREsRsPFLKPDER (A) DRES(1.0)RS(1.0)PFLKPDER K:TMT10-Lys-Only,s:Phosphorylated S SCAF1 139895 5 30 76.1 647.25 HUMAN 1 -5.1426 6.8989 KFSYIGLSQNNLRVH-p Q96S59;S181-p KFSYIGLSQNNLRVH 0.376812775473023 0.320538359727879 0.139 0.098 7.83557728186768 6.53467533901108 0.139 0.098 0.164604715251156 0.222091770406985 1.60662413274566 1.37893269178638 Q96S59 RANBP9 Q96S59.S181.p_RANBP9 Q96S59_S181s _1_1_181_181 Q96S59 Q96S59 Ran-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20230.20230.3 17.06 14.31 17.057 3 1 1 0 731.7231 2113.1806 S181s TMT10 173 (K) DKFSYIGLsQNNLR (V) DKFS(0.0)Y(0.0)IGLS(0.99)QNNLR K:TMT10,s:Phosphorylated S RANBP9 78701.8 2 1 1268.2 160.1 HUMAN 1 7.8356 6.5347 KFTMDLDSDEDFSDF-p P11388-2;S1358-p KFTMDLDSDEDFSDF 0.585529557058559 0.66239093090053 -0.273666666666667 -0.205 4.27528992658084 2.44984740875004 -0.273666666666667 -0.205 0.373655180053681 0.568872918089433 -0.969399175190412 -0.606193590535834 P11388 TOP2A P11388.2.S1358.p_TOP2A P11388-2_S1358sS1363s_2_2_1358_1363 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28147.28147.4 12.55 12.55 6.886 4 2 2 0 783.8461 2972.4326 S1358s S1363s TMT10 1350 (K) TKFTMDLDsDEDFsDFDEK (T) T(0.0)KFT(0.0)MDLDS(0.99)DEDFS(0.99)DFDEK K:TMT10,s:Phosphorylated S TOP2A 178239.3 1 19 71.2 658.36 HUMAN 1 -4.2753 -2.4498 KFVSRPPTPKCVIDI-p Q15652;T505-p KFVSRPPTPKCVIDI 0.877669888673731 0.710410534504955 0.0223333333333333 0.0363333333333333 1.1145074884006 2.04121321578792 0.0223333333333333 0.0363333333333333 0.773658410521984 0.624998073138073 0.302359827286085 0.517849197487334 Q15652 JMJD1C Q15652.T505.p_JMJD1C Q15652_T505t _1_1_505_505 Q15652 Q15652|Q15652-3|A0A1W2PNZ9|Q15652-2 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11805.11805.3 10.1 6.17 3.67 2 1 1 0 522.9659 1486.9146 T505t TMT10 499 (K) FVSRPPtPK (C) FVS(0.0)RPPT(0.99)PK K:TMT10,t:Phosphorylated T JMJD1C 286573.8 3 5 377.1 336.35 HUMAN 1 1.1145 2.0412 KFVYFLPSPVNSSNP-p O60281;S1159-p KFVYFLPSPVNSSNP 0.164891315062604 0.0591148794902953 -0.304 -0.226333333333333 15.6762387199986 16.364612276657 -0.304 -0.226333333333333 0.0270630118685097 0.0230961064389864 -3.00626866936579 -3.13623752622384 O60281 ZNF292 O60281.S1159.p_ZNF292 O60281_S1159s _1_1_1159_1159 O60281 O60281|J3KNV1|O60281-2 Zinc finger protein 292 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36472.36472.4 16.03 16.58 1.132 7 1 1 0 737.1301 2865.5227 S1159s TMT10 1153 (K) FVYFLPsPVNSSNPFFTSQTK (A) FVY(0.0)FLPS(0.99)PVNS(0.0)S(0.0)NPFFT(0.0)S(0.0)QT(0.0)K K:TMT10,s:Phosphorylated S ZNF292 309716.9 2 3 1936.1 106.19 HUMAN 1 -15.6762 -16.3646 KFYNVHFSNKLPARP-p Q8NDB2;S764-p KFYNVHFSNKLPARP 0.40723792230155 0.806985687423568 0.182333333333333 -0.0246666666666666 7.20507591696568 1.30284044515338 0.182333333333333 -0.0246666666666666 0.190323496773466 0.740825555740001 1.49686507867591 -0.348171921998188 Q8NDB2 BANK1 Q8NDB2.S764.p_BANK1 Q8NDB2_T751tY759yS764s_3_3_751_764 Q8NDB2 Q8NDB2|Q8NDB2-2|Q8NDB2-3|Q8NDB2-4 B-cell scaffold protein with ankyrin repeats HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25453.25742.4 7.02 3.59 99 3 3 3 0 1064.2836 4014.212 T751t Y759y S764s TMT10 750 (K) EtAHNENKFyNVHFsNKLPARPQVEK (E) ET(1.0)AHNENKFY(1.0)NVHFS(1.0)NKLPARPQVEK K:TMT10,t:Phosphorylated T,y:Phosphorylated Y,s:Phosphorylated S BANK1 90250.2 4 1 7287.1 7.02 HUMAN 1 7.2051 -1.3028 KFYSLPQSPQQFKQL-p Q6PI48;S242-p KFYSLPQSPQQFKQL 0.987481982540924 0.0150151444431797 -0.003 0.432666666666667 0.111041573563786 25.2305543308785 -0.00300000000000001 0.432666666666667 0.974755832843835 0.00299877973210784 -0.0331336860109583 5.09597009734576 Q6PI48 DARS2 Q6PI48.S242.p_DARS2 Q6PI48_S242s _1_1_242_242 Q6PI48 Q6PI48 Aspartate--tRNA ligase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24238.24238.3 13.62 13.62 5.876 3 1 1 0 670.0175 1928.0682 S242s TMT10 236 (K) FYSLPQsPQQFK (Q) FY(0.0)S(0.0)LPQS(0.99)PQQFK K:TMT10,s:Phosphorylated S DARS2 74131.9 2 1 5482.1 18.92 HUMAN 1 -0.111 25.2306 KGAAPPDSPVVYSDR-p Q9NZU5;S254-p KGAAPPDSPVVYSDR 0.205314399353833 0.626434449053383 -0.246333333333333 -0.099 13.2951070435563 2.76240276955314 -0.246333333333333 -0.099 0.0468262409644791 0.529370484330853 -2.56438211648454 -0.671636099407876 Q9NZU5 LMCD1 Q9NZU5.S254.p_LMCD1 Q9NZU5_S254s _1_1_254_254 Q9NZU5 Q9NZU5|Q9NZU5-2|B4DEY6 LIM and cysteine-rich domains protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11201.11201.3 14.73 14.73 5.922 3 1 1 0 580.6118 1659.854 S254s TMT10 248 (K) GAAPPDsPVVYSDR (A) GAAPPDS(0.99)PVVY(0.0)S(0.0)DR s:Phosphorylated S LMCD1 42030.2 2 3 4084.1 37.88 HUMAN 1 -13.2951 -2.7624 KGADNDGSGSESGYT-p Q7Z417;S212-p KGADNDGSGSESGYT 0.389389394272965 0.0205344648135939 -0.155333333333333 -0.343666666666667 7.5760685281608 23.092776462721 -0.155333333333333 -0.343666666666667 0.174740328243763 0.00490594136999694 -1.56152087616567 -4.57124753077522 Q7Z417 NUFIP2 Q7Z417.S212.p_NUFIP2 Q7Z417_S212s _1_1_212_212 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8016.8218.3 18.54 18.54 1.198 6 1 1 0 846.7501 2458.2665 S212s TMT10 206 (K) GADNDGsGSESGYTTPKK (R) GADNDGS(0.99)GS(0.0)ES(0.0)GY(0.0)T(0.0)T(0.0)PKK K:TMT10,s:Phosphorylated S NUFIP2 76176.8 8 5 304.1 375.48 HUMAN 1 -7.5761 -23.0928 KGAKKEGSDGPLATS-p P08240;S177-p KGAKKEGSDGPLATS 0.519054516871901 0.0199517873994956 -0.0943333333333334 -0.377 5.25949692167974 23.3063136219018 -0.0943333333333334 -0.377 0.297886147499054 0.00467055658255287 -1.15140672532214 -4.6219494223078 P08240 SRPR P08240.S177.p_SRPR P08240_S177s _1_1_177_177 P08240 P08240|P08240-2 Signal recognition particle receptor subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13693.13693.4 14.37 10.5 3.666 3 1 1 0 702.6483 2727.6062 S177s TMT10 174 (K) KEGsDGPLATSKPVPAEK (S) KEGS(0.99)DGPLAT(0.0)S(0.0)KPVPAEK K:TMT10,s:Phosphorylated S SRPRA 70266.4 2 2 1857.1 110.87 HUMAN 1 -5.2595 -23.3063 KGAKVFGSLERGLDK-p Q14680;S529-p KGAKVFGSLERGLDK 0.452590411827065 0.0955792974893037 0.273333333333333 -1.55866666666667 6.35108843492018 13.4864066723677 0.273333333333333 -1.55866666666667 0.231681393404484 0.0448083892886515 1.34687474896513 -2.5976059127023 Q14680 MELK Q14680.S529.p_MELK Q14680_S529s _1_1_529_529 Q14680 Q14680|Q14680-6|Q14680-7|Q14680-8|Q14680-2|Q14680-5|Q14680-4|Q14680-3 Maternal embryonic leucine zipper kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22186.22186.3 11.91 11.91 99 1 1 1 0 586.9905 1678.9892 S529s TMT10 526 (K) VFGsLERGLDK (V) VFGS(1.0)LERGLDK K:TMT10,s:Phosphorylated S MELK 75553.6 3 7 1543.1 132.89 HUMAN 1 6.3511 -13.4864 KGALHTVSHEDIRDI-p Q13136;S763-p KGALHTVSHEDIRDI 0.278015984722801 0.115003759459767 0.193666666666667 0.172 10.5216964742015 12.3914474945118 0.193666666666667 0.172 0.0886809532072506 0.0576574260356989 2.07251096304797 2.40072104880663 Q13136 PPFIA1 Q13136.S763.p_PPFIA1 Q13136_S763s _1_1_763_763 Q13136 Q13136|Q13136-2 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6741.6741.3 14.12 14.12 1.485 2 1 1 0 548.6091 1563.8441 S763s TMT10 757 (K) GALHTVsHEDIR (D) GALHT(0.0)VS(0.99)HEDIR s:Phosphorylated S PPFIA1 136347 6 32 248.1 410.18 HUMAN 1 10.5217 12.3914 KGAVREASPAPLAQG-p Q9P1Y6;S1202-p KGAVREASPAPLAQG 0.553424299269024 0.0602063736363553 -0.236666666666667 0.308 4.74361571253194 16.2575334333684 -0.236666666666667 0.308 0.33545821269357 0.0236726379839479 -1.05685777045607 3.115551373297 Q9P1Y6 PHRF1 Q9P1Y6.S1202.p_PHRF1 Q9P1Y6_S1202s _1_1_1202_1202 Q9P1Y6 Q9P1Y6|Q9P1Y6-3|A0A0J9YWD5|A0A0J9YYB5|F8WEF5 PHD and RING finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20697.20697.5 23.74 23.74 1.119 4 1 1 0 883.8611 4335.2985 S1202s TMT10 1200 (R) EAsPAPLAQGEPGREDLPTRLPALGEAHVSPEVATADK (A) EAS(0.99)PAPLAQGEPGREDLPT(0.0)RLPALGEAHVS(0.0)PEVAT(0.0)ADK K:TMT10,s:Phosphorylated S PHRF1 180374.6 1 15 438.1 312.23 HUMAN 1 -4.7436 16.2575 KGCPLNGSCSKVHFH-p C9J6P4;S648-p KGCPLNGSCSKVHFH 0.780995115911564 0.536289359676561 -0.0416666666666667 0.059 2.06247828625548 3.64117221646256 -0.0416666666666667 0.059 0.621945272993084 0.432397105762774 -0.52259427381668 0.847751885352208 C9J6P4 ZC3HAV1 C9J6P4.S648.p_ZC3HAV1 C9J6P4_S648s_1_1_648_648 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9665.9665.2 10.76 10.76 2.176 2 1 1 0 809.8726 1537.7867 N646n S648s TMT10 642 (K) GCPLnGsCSK (V) GCPLN(1.0)GS(0.99)CS(0.0)K C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S ZC3HAV1 115909.2 1 16 361.1 343.37 HUMAN 1 -2.0625 3.6412 KGDDDEESDEEAVKK-p O43395;S619-p KGDDDEESDEEAVKK 0.347574855103594 0.677643930314929 -0.200666666666667 0.047 8.52701277958155 2.30940639935323 -0.200666666666667 0.0470000000000001 0.140377893793088 0.587569657002437 -1.72648393110535 0.576211201189567 O43395 PRPF3 O43395.S619.p_PRPF3 O43395_S619s _1_1_619_619 O43395 O43395 U4/U6 small nuclear ribonucleoprotein Prp3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14964.15379.4 21.5 21.5 9.202 4 1 1 0 941.9597 3684.8534 S619s TMT10 602 (R) IKWDEQTSNTKGDDDEEsDEEAVK (K) IKWDEQT(0.0)S(0.0)NT(0.0)KGDDDEES(0.99)DEEAVK K:TMT10,s:Phosphorylated S PRPF3 77698.7 15 5 908.1 202.16 HUMAN 1 -8.527 2.3094 KGDGRPETPKQKGES-p Q6KC79;T735-p KGDGRPETPKQKGES 0.790683930770991 0.0189905361404552 0.059 0.415333333333333 1.96847322879453 23.6739864192319 0.059 0.415333333333333 0.635554323015281 0.00429142333191858 0.501808836244597 4.71011269777506 Q6KC79 NIPBL Q6KC79.T735.p_NIPBL Q6KC79_T735t _1_1_735_735 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4145.4145.3 10.44 6.76 99 1 1 1 0 660.7004 1900.1219 T735t TMT10 727 (K) QKGDGRPEtPK (Q) QKGDGRPET(1.0)PK K:TMT10,t:Phosphorylated T NIPBL 318099.5 10 15 50.1 752.87 HUMAN 1 1.9685 23.674 KGDGTQNSANPSPSG-p Q96L73;S975-p KGDGTQNSANPSPSG 0.104117071824167 0.320273560676248 0.342666666666667 0.095 20.7374775657073 6.54031615164312 0.342666666666667 0.095 0.00843824718951799 0.221803494850664 4.03903908868214 1.37992640390448 Q96L73 NSD1 Q96L73.S975.p_NSD1 Q96L73_S975sS979s_2_2_975_979 Q96L73 Q96L73|Q96L73-3|Q96L73-2 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27904.27904.4 13.66 13.66 1.171 9 2 2 0 1080.5295 4158.1882 S975s N977n S979s TMT10 968 (K) KGDGTQNsAnPsPSGGDSALSGELSASLPGLLSDKR (D) KGDGT(0.0)QN(0.0)S(0.99)AN(0.99)PS(0.99)PS(0.0)GGDS(0.0)ALS(0.0)GELS(0.0)AS(0.0)LPGLLS(0.0)DKR K:TMT10,s:Phosphorylated S,n:Deamidated NSD1 302295.2 3 15 601.1 263.26 HUMAN 1 20.7375 6.5403 KGDIVRKSMSHQAAI-p Q4G0F5;S302-p KGDIVRKSMSHQAAI 0.991821498556597 0.0287477516328161 -0.00300000000000002 0.298 0.0759700216766469 20.8701222289226 -0.00300000000000003 0.298 0.982659365871862 0.00818441753381726 -0.0227574688108087 4.06421053063417 Q4G0F5 VPS26B Q4G0F5.S302.p_VPS26B Q4G0F5_S302s _1_1_302_302 Q4G0F5 Q4G0F5 Vacuolar protein sorting-associated protein 26B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5323.5323.3 17.09 17.09 1.16 3 1 1 0 532.5909 1515.7899 S302s TMT10 302 (K) sMSHQAAIASQR (F) S(0.99)MS(0.0)HQAAIAS(0.0)QR s:Phosphorylated S VPS26B 39268 1 1 3476.1 50.1 HUMAN 1 -0.076 20.8701 KGDKGFESPRPYKLT-p Q6P1X5;S22-p KGDKGFESPRPYKLT 0.697222520756474 0.128799975574369 0.0703333333333333 0.231 2.94244357703672 11.7344311444186 0.0703333333333333 0.231 0.507873604832807 0.0670744137590203 0.708697498556775 2.28420658576505 Q6P1X5 TAF2 Q6P1X5.S22.p_TAF2 Q6P1X5_S22s _1_1_22_22 Q6P1X5 Q6P1X5|E5RI28 Transcription initiation factor TFIID subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11160.11160.3 11.58 11.58 9.489 2 1 1 0 540.2852 1538.8731 S22s TMT10 19 (K) GFEsPRPYK (L) GFES(0.99)PRPY(0.0)K K:TMT10,s:Phosphorylated S TAF2 138452.4 1 1 3688.1 45.35 HUMAN 1 2.9424 11.7344 KGDKQVEYLDLDLDS-p Q13480-2;Y657-p KGDKQVEYLDLDLDS 0.0854356127909767 0.293195154318822 -0.411333333333333 -0.137666666666667 22.8658657002469 7.03408218754492 -0.411333333333333 -0.137666666666667 0.00516908209878829 0.197966534788215 -4.52278949950675 -1.46657065099251 Q13480 GAB1 Q13480.2.Y657.p_GAB1 Q13480-2_Y657y _1_1_657_657 Q13480-2 Q13480-2 Isoform 2 of GRB2-associated-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24122.24122.3 13.94 13.94 12.387 2 1 1 0 678.3464 1953.0581 Y657y TMT10 654 (K) QVEyLDLDLDSGK (S) QVEY(0.99)LDLDLDS(0.0)GK K:TMT10,y:Phosphorylated Y GAB1 80631.3 1 18 368.1 340.82 HUMAN 1 -22.8659 -7.0341 KGDRVNNSIDDVFLP-p A0A1B0GVL4;S1456-p KGDRVNNSIDDVFLP 0.140760843773736 0.0285065180740172 -0.346333333333333 -0.498333333333333 17.4175375598266 20.9270818954731 -0.346333333333333 -0.498333333333333 0.0181236740968935 0.00807777608581228 -3.34533028782197 -4.07675516168136 A0A1B0GVL4 NotFound A0A1B0GVL4.S1456.p_NotFound A0A1B0GVL4_S1456s _1_1_1456_1456 A0A1B0GVL4 A0A1B0GVL4|P78312-5|P78312-2|P78312-6 Protein FAM193A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26764.26764.3 13.18 7.95 99 1 1 1 0 633.6735 1819.0366 S1456s TMT10 1453 (R) VNNsIDDVFLPK (D) VNNS(1.0)IDDVFLPK K:TMT10,s:Phosphorylated S FAM193A 168423.2 1 9 1381.1 148.28 HUMAN 1 -17.4175 -20.9271 KGDTDRLTPEALKGL-p Q7Z6K5-2;T112-p KGDTDRLTPEALKGL 0.555485523366669 0.00362778359573203 0.089 0.608666666666667 4.7128863580153 36.2741329521472 0.089 0.608666666666667 0.337840230090181 0.000235823295873046 1.05117024397206 8.57530864476005 Q7Z6K5 ARPIN Q7Z6K5.2.T112.p_ARPIN Q7Z6K5-2_T112t _1_1_112_112 Q7Z6K5-2 Q7Z6K5-2|H0YL85|H0YMP5 Isoform C15orf38-AP3S2 of Arpin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14122.14122.3 12.49 7.5 2.473 2 1 1 0 618.6639 1774.0111 T112t TMT10 106 (K) GDTDRLtPEALK (G) GDT(0.0)DRLT(0.99)PEALK K:TMT10,t:Phosphorylated T ARPIN 44223.4 1 3 4141.1 36.8 HUMAN 1 4.7129 36.2741 KGEDAEESLEEEEAL-p Q53T59;S194-p KGEDAEESLEEEEAL 0.608691226568273 0.0229363076461719 -0.0873333333333333 0.346666666666667 3.99139890275411 22.3809804473926 -0.0873333333333333 0.346666666666667 0.398896393443065 0.00577965553279666 -0.915485150311077 4.40483547692765 Q53T59 HS1BP3 Q53T59.S194.p_HS1BP3 Q53T59_S194s _1_1_194_194 Q53T59 Q53T59|F6TR53 HCLS1-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30936.30936.3 17.29 17.29 99 1 1 1 0 881.0626 2561.2126 S194s TMT10 188 (K) GEDAEEsLEEEEALDPLGIMR (S) GEDAEES(1.0)LEEEEALDPLGIMR s:Phosphorylated S HS1BP3 42893.6 2 3 2967.1 64.48 HUMAN 1 -3.9914 22.381 KGEDVNRTLEGGRKP-p P58546;T31-p KGEDVNRTLEGGRKP 0.583452009265627 0.0197058464984066 -0.0936666666666667 0.348 4.30547746523163 23.408315420088 -0.0936666666666667 0.348 0.371066931991338 0.00456213841902019 -0.975089816958262 4.64629796481283 P58546 MTPN P58546.T31.p_MTPN P58546_T31t _1_1_31_31 P58546 P58546 Myotrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33862.33862.5 17.29 6.19 5.126 2 1 1 0 905.2856 4442.4473 T31t TMT10 25 (K) GEDVNRtLEGGRKPLHYAADCGQLEILEFLLLK (G) GEDVNRT(0.99)LEGGRKPLHY(0.0)AADCGQLEILEFLLLK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T MTPN 13065.7 2 1 4756.1 26.98 HUMAN 1 -4.3055 23.4083 KGEHSIVYLKPSYAF-p Q02790;Y220-p KGEHSIVYLKPSYAF 0.220619198792807 0.364297438884349 -0.205666666666667 0.119666666666667 12.6387226392791 5.81308793961679 -0.205666666666667 0.119666666666667 0.0544662827246057 0.262235332322718 -2.4461658914445 1.25090530274366 Q02790 FKBP4 Q02790.Y220.p_FKBP4 Q02790_Y220y _1_1_220_220 Q02790 Q02790 Peptidyl-prolyl cis-trans isomerase FKBP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22422.22422.4 24.03 24.03 6.037 5 1 1 0 702.3833 2726.5485 Y220y TMT10 214 (K) GEHSIVyLKPSYAFGSVGK (E) GEHS(0.0)IVY(0.99)LKPS(0.0)Y(0.0)AFGS(0.0)VGK K:TMT10,y:Phosphorylated Y FKBP4 52088.9 1 4 706.1 239.22 HUMAN 1 -12.6387 5.8131 KGEKEPPSPGMERKR-p P56182;S383-p KGEKEPPSPGMERKR 0.684008203361172 0.00112568182952083 0.0623333333333333 -1.144 3.09266923419941 49.2456817978496 0.0623333333333333 -1.144 0.490606250055614 1.1896845462117e-05 0.739172426119315 -15.187940463766 P56182 RRP1 P56182.S383.p_RRP1 P56182_S383s _1_1_383_383 P56182 P56182 Ribosomal RNA processing protein 1 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6980.6980.3 10.8 7.31 99 1 1 1 0 756.0656 2186.2207 S383s TMT10 375 (R) GKGEKEPPsPGMER (K) GKGEKEPPS(1.0)PGMER K:TMT10,s:Phosphorylated S RRP1 53066.5 12 2 3817.1 42.52 HUMAN 1 3.0927 -49.2457 KGESRPETPKQKSDG-p Q6KC79;T713-p KGESRPETPKQKSDG 0.199298505216404 0.00214335325679134 -0.454333333333333 0.941 13.638455587839 41.4788864491829 -0.454333333333334 0.941 0.0432667666378039 7.11395895415853e-05 -2.62677474073783 10.8169642744382 Q6KC79 NIPBL Q6KC79.T713.p_NIPBL Q6KC79_T713t_1_1_713_713 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5051.5051.3 9.46 5.02 3.372 2 1 1 0 593.313 1714.9852 Q705q T713t Hydrogen 705 (K) qKGESRPEtPK (Q) Q(1.0)KGES(0.0)RPET(0.99)PK K:TMT10-Lys-Only,q:Pyroglutamic acid,t:Phosphorylated T NIPBL 318099.5 8 13 50.1 752.87 HUMAN 1 -13.6385 41.4789 KGESSSPSPSAEKGK-p P28290;S318-p KGESSSPSPSAEKGK 0.368479250934454 0.00659651302981077 -0.149333333333333 -0.472 8.03934452247603 31.344223140409 -0.149333333333333 -0.472 0.157059983594416 0.00073379996373899 -1.64198516675772 -6.84027670317452 P28290 SSFA2 P28290.S318.p_SSFA2 P28290_S318s _1_1_318_318 P28290 P28290 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16132.16132.5 13.04 11.83 2.703 6 1 1 0 672.7577 3279.7912 S318s TMT10 302 (K) LNLCVDKTEKGESSSPsPSAEK (G) LNLCVDKT(0.0)EKGES(0.0)S(0.0)S(0.0)PS(0.99)PS(0.0)AEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SSFA2 139638.7 2 10 73.1 652.35 HUMAN 1 -8.0393 -31.3442 KGETMDTS_______-p Q9Y230;S463-p KGETMDTS_______ 0.34546654210909 0.660045961317329 0.145333333333333 0.044 8.5785660897052 2.46851797126684 0.145333333333333 0.0440000000000001 0.138721376970403 0.566432551014385 1.73540987495284 0.610151410044708 Q9Y230 RUVBL2 Q9Y230.S463.p_RUVBL2 Q9Y230_S463s _1_1_463_463 Q9Y230 Q9Y230|Q9Y230-2 RuvB-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31451.31451.3 17.98 17.98 1.862 4 1 1 0 926.0976 2696.3166 S463s TMT10 445 (K) EYQDAFLFNELKGETMDTs (-) EY(0.0)QDAFLFNELKGET(0.0)MDT(0.0)S(0.99) K:TMT10,s:Phosphorylated S RUVBL2 51326.8 3 8 1680.1 121.4 HUMAN 1 8.5786 2.4685 KGEWNRKSPNLSKCG-p R4GMR5;S43-p KGEWNRKSPNLSKCG 0.143638422086766 0.406502929574895 -0.345 -0.0923333333333333 17.2151062821077 5.20409428016186 -0.345 -0.0923333333333333 0.0189884437233029 0.301710602411083 -3.3051226237789 -1.14109262527738 R4GMR5 NotFound R4GMR5.S43.p_NotFound R4GMR5_S43s _1_1_43_43 R4GMR5 P48556|R4GMR5|K7ENY6 26S proteasome non-ATPase regulatory subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10363.10363.4 7.68 6.18 2.43 2 1 1 0 546.554 2103.2278 S43s TMT10 37 (K) GEWNRKsPNLSK (C) GEWNRKS(0.99)PNLS(0.0)K K:TMT10,s:Phosphorylated S PSMD8 32722.1 1 2 3400.1 51.99 HUMAN 1 -17.2151 -5.2041 KGFDPTASPFCQ___-p Q9UPT8;S1299-p KGFDPTASPFCQ___ 0.763886703898772 0.81316467469469 -0.0653333333333334 0.038 2.24366110500264 1.25752437801949 -0.0653333333333333 0.038 0.596532197572747 0.748596103413427 -0.562111047336627 0.33724962562922 Q9UPT8 ZC3H4 Q9UPT8.S1299.p_ZC3H4 Q9UPT8_S1299s _1_1_1299_1299 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22011.22011.2 10.13 10.13 1.711 2 1 1 0 768.3274 1455.6776 S1299s TMT10 1293 (K) GFDPTAsPFCQ (-) GFDPT(0.0)AS(0.99)PFCQ C:Carbamidomethylation,s:Phosphorylated S ZC3H4 140881.7 1 12 427.1 318.7 HUMAN 1 -2.2437 1.2575 KGFGYKGSCFHRIIP-p P62937;S51-p KGFGYKGSCFHRIIP 0.323878615336012 0.0727856903675008 0.210666666666667 0.405666666666667 9.17029635271119 15.1188148330905 0.210666666666667 0.405666666666667 0.121051552789611 0.0307693638001196 1.83784609659193 2.89885480918698 P62937 PPIA P62937.S51.p_PPIA P62937_S51s _1_1_51_51 P62937 P62937|C9J5S7 Peptidyl-prolyl cis-trans isomerase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10247.10247.4 13.68 13.68 6.373 2 1 1 0 464.2289 1773.9259 S51s TMT10 45 (K) GFGYKGsCFHR (I) GFGY(0.0)KGS(0.99)CFHR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PPIA 18240.4 1 2 2402.1 85.13 HUMAN 1 9.1703 15.1188 KGFNGCDSPEPDGED-p Q14814;S98-p KGFNGCDSPEPDGED 0.474979484134802 0.00947145523994574 -0.1 0.413 5.95313339723431 28.5679040973259 -0.1 0.413 0.253914007684746 0.00139062358344203 -1.27621017583937 5.99904847171106 Q14814 MEF2D Q14814.S98.p_MEF2D Q14814_S98s_1_1_98_98 Q14814 Q14814|Q14814-4|Q05BX2 Myocyte-specific enhancer factor 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25965.25965.4 18.55 18.55 1.889 3 1 1 0 819.3625 3193.4883 N94n S98s TMT10 92 (K) GFnGCDsPEPDGEDSLEQSPLLEDK (Y) GFN(1.0)GCDS(0.99)PEPDGEDS(0.0)LEQS(0.0)PLLEDK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S MEF2D 56165 7 1 1187.1 168.72 HUMAN 1 -5.9531 28.5679 KGFSLNWS_______-p Q7RTP6;S2002-p KGFSLNWS_______ 0.270018114980666 0.150416654230421 -0.183333333333333 -0.181666666666667 10.7755055264721 10.8232507295581 -0.183333333333333 -0.181666666666667 0.0836468223705427 0.0827322674136959 -2.11682461371994 -2.12423233319639 Q7RTP6 MICAL3 Q7RTP6.S2002.p_MICAL3 Q7RTP6_S2002s _1_1_2002_2002 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29147.29147.2 7.59 7.59 7.587 2 1 1 0 560.2578 1039.541 S2002s TMT10 1996 (K) GFSLNWs (-) GFS(0.0)LNWS(0.99) s:Phosphorylated S MICAL3 225431.9 2 23 190.1 466.81 HUMAN 1 -10.7755 -10.8233 KGGETPGSEQWKFQE-p O60271;S229-p KGGETPGSEQWKFQE 0.289299686753012 0.00880962755437148 -0.192333333333333 -0.477333333333333 10.1580943583559 29.1304437379118 -0.192333333333333 -0.477333333333333 0.0964252035157968 0.00122167482985826 -2.00919073047868 -6.16246326547066 O60271 SPAG9 O60271.S229.p_SPAG9 O60271_S229s _1_1_229_229 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-9|O60271-3|O60271-5 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18637.18637.3 9.14 9.14 9.141 3 1 1 0 900.4489 2619.3567 S229s TMT10 223 (K) GGETPGsEQWKFQELSQPR (S) GGET(0.0)PGS(0.99)EQWKFQELS(0.0)QPR K:TMT10,s:Phosphorylated S SPAG9 147001.6 1 17 84.1 629.25 HUMAN 1 -10.1581 -29.1304 KGGGGGGSPGPTAGP-p Q9NRL3-3;S53-p KGGGGGGSPGPTAGP 0.529175998361839 0.0335244668360361 -0.0936666666666667 0.267333333333333 5.11465202613884 19.8776538887561 -0.0936666666666667 0.267333333333333 0.307988710431385 0.0102857179497631 -1.12502777439378 3.84916890461719 Q9NRL3 STRN4 Q9NRL3.3.S53.p_STRN4 Q9NRL3-3_S53s _1_1_53_53 Q9NRL3-3 Q9NRL3-3 Isoform 3 of Striatin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37051.37051.4 20.8 20.8 1.853 3 1 1 0 865.4349 3378.7545 S53s TMT10 47 (K) GGGGGGsPGPTAGPEPLSLPGILHFIQHEWAR (F) GGGGGGS(0.99)PGPT(0.0)AGPEPLS(0.0)LPGILHFIQHEWAR s:Phosphorylated S STRN4 82006 3 7 1137.1 173.35 HUMAN 1 -5.1147 19.8777 KGGGPGKSPTRGST_-p B8ZZ87;S212-p KGGGPGKSPTRGST_ 0.270524761967708 0.506954929539413 0.196 -0.0896666666666666 10.7607699239971 3.95394198065782 0.196 -0.0896666666666666 0.0839311178941091 0.402351664150156 2.11424903583063 -0.908162765719714 B8ZZ87 MZT2B B8ZZ87.S212.p_MZT2B B8ZZ87_S212s _1_1_212_212 B8ZZ87 B8ZZ87|Q6NZ67 Mitotic-spindle organizing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.3826.3826.2 9.76 9.76 4.68 2 1 1 0 726.3917 1371.8109 S212s TMT10 206 (K) GGGPGKsPTR (G) GGGPGKS(0.99)PT(0.0)R K:TMT10,s:Phosphorylated S MZT2B 22452.3 4 2 2354.2 86.87 HUMAN 1 10.7608 -3.9539 KGGGSKGSPGQRPPV-p A6NEL2;S166-p KGGGSKGSPGQRPPV 0.384110837361105 0.110360420361523 0.141666666666667 0.177666666666667 7.69409929370441 12.6387428232027 0.141666666666667 0.177666666666667 0.170055260367071 0.054466029592047 1.58204570929383 2.44487243609694 A6NEL2 SOWAHB A6NEL2.S166.p_SOWAHB A6NEL2_S166s _1_1_166_166 A6NEL2 A6NEL2 Ankyrin repeat domain-containing protein SOWAHB HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8905.8905.3 11.36 5.98 99 1 1 1 0 713.7062 2059.1358 S166s TMT10 165 (K) GsPGQRPPVPAAAAAGAQAR (A) GS(1.0)PGQRPPVPAAAAAGAQAR s:Phosphorylated S SOWAHB 86311.4 5 3 711.1 238.55 HUMAN 1 7.6941 12.6387 KGGHGAASPSEKGAH-p Q07065;S17-p KGGHGAASPSEKGAH 0.037990252699828 0.00230985592572105 0.634333333333333 -0.771 32.3409136680335 40.6050222603076 0.634333333333333 -0.771 0.000583322372097059 8.69956973980418e-05 7.17720272720408 -10.4068716438857 Q07065 CKAP4 Q07065.S17.p_CKAP4 Q07065_S17s _1_1_17_17 Q07065 Q07065 Cytoskeleton-associated protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3968.3968.2 13.96 13.96 1.457 2 1 1 0 768.3857 1455.7956 S17s TMT10 11 (K) GGHGAAsPSEK (G) GGHGAAS(0.99)PS(0.0)EK K:TMT10,s:Phosphorylated S CKAP4 66135.4 2 1 4654.1 28.31 HUMAN 1 32.3409 -40.605 KGGKSSRSPEDPEKL-p Q07617;S791-p KGGKSSRSPEDPEKL 0.736842699443541 0.520867198926642 0.049 -0.091 2.51272665498217 3.80594376866696 0.049 -0.091 0.560695840742511 0.416299244886851 0.619576526708254 -0.87970520389209 Q07617 SPAG1 Q07617.S791.p_SPAG1 Q07617_S791s_1_1_791_791 Q07617 Q07617 Sperm-associated antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30596.30596.4 9.09 9.09 0 4 1 1 0 938.7454 3670.9845 S791s N805n Hydrogen 791 (R) sPEDPEKLPIAKPNnAYEFGQIINALSTR (K) S(0.99)PEDPEKLPIAKPN(0.50)N(0.50)AY(0.0)EFGQIIN(0.0)ALS(0.0)T(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated SPAG1 104777.7 2 5 1758.1 117.12 HUMAN 1 2.5127 -3.8059 KGGNCDLSHQERLQS-p Q9H410;S68-p KGGNCDLSHQERLQS 0.771197329362878 0.0192385000791759 0.0516666666666667 -0.584333333333333 2.16359088920813 23.5754624208041 0.0516666666666667 -0.584333333333333 0.607632383134408 0.00438989121204052 0.544733178723794 -4.6863797120275 Q9H410 DSN1 Q9H410.S68.p_DSN1 Q9H410_S68s _1_1_68_68 Q9H410 Q9H410|Q9H410-4 Kinetochore-associated protein DSN1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3777.3777.3 8.78 4.54 99 1 1 1 0 646.9802 1858.9594 S68s TMT10 61 (K) KGGNCDLsHQER (L) KGGNCDLS(1.0)HQER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DSN1 40408.8 1 3 1406.1 145.92 HUMAN 1 2.1636 -23.5755 KGGSTTGSQFLEQFK-p Q14157-5;S360-p KGGSTTGSQFLEQFK 0.399348827019039 0.0584025953292132 -0.138666666666667 -0.218333333333333 7.35486083914961 16.4340575998914 -0.138666666666667 -0.218333333333333 0.183871287074137 0.0227297280695927 -1.52299782633099 -3.149683122346 Q14157 UBAP2L Q14157.5.S360.p_UBAP2L Q14157-5_S360s _1_1_360_360 Q14157-5 Q14157-5|F8W726|Q14157-3|Q14157-1|Q14157-4 Isoform 5 of Ubiquitin-associated protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25361.25361.3 10.22 10.22 2.518 4 1 1 0 675.6755 1945.0431 S360s TMT10 354 (K) GGSTTGsQFLEQFK (T) GGS(0.0)T(0.0)T(0.0)GS(0.99)QFLEQFK K:TMT10,s:Phosphorylated S UBAP2L 116866.1 1 9 189.1 467.5 HUMAN 1 -7.3549 -16.4341 KGHHVTDSENDEPLN-p Q96ST2;S69-p KGHHVTDSENDEPLN 0.238535570822241 0.0665607083904215 0.184333333333333 0.441666666666667 11.9065760899203 15.6514100221262 0.184333333333333 0.441666666666667 0.0644677318779318 0.0272181747323768 2.31577469247806 2.99947746382664 Q96ST2 IWS1 Q96ST2.S69.p_IWS1 Q96ST2_S69sS80sS82s_3_3_69_82 Q96ST2 Q96ST2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12737.12737.4 13.17 13.17 1.149 5 3 3 0 875.8538 3260.4889 S69s S80s S82s TMT10 63 (K) GHHVTDsENDEPLNLNAsDsESEELHR (Q) GHHVT(0.0)DS(0.99)ENDEPLNLNAS(0.99)DS(0.99)ES(0.0)EELHR s:Phosphorylated S IWS1 92010 2 20 230.1 422.87 HUMAN 1 11.9066 15.6514 KGHLAFLSGQ_____-p O95639;S267-p KGHLAFLSGQ_____ 0.960395582779587 0.473305021871554 0.008 -0.117666666666667 0.33770666365935 4.33134092253058 0.00799999999999998 -0.117666666666667 0.925186599195097 0.368863691066989 0.0983609227345041 -0.979782942757561 O95639 CPSF4 O95639.S267.p_CPSF4 O95639_S267s _1_1_267_267 O95639 O95639|O95639-2|O95639-3|C9JEV9|B7Z7B0 Cleavage and polyadenylation specificity factor subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19394.19394.2 13.13 7.84 99 1 1 1 0 619.8109 1158.6469 S267s TMT10 261 (K) GHLAFLsGQ (-) GHLAFLS(1.0)GQ s:Phosphorylated S CPSF4 31281.2 1 3 4234.1 35.01 HUMAN 1 0.3377 -4.3313 KGHWGSDSSKAKRRR-p Q6PJ61;S128-p KGHWGSDSSKAKRRR 0.904044346512471 0.356959141707165 0.0236666666666667 0.103333333333333 0.861436870701254 5.93498682856358 0.0236666666666667 0.103333333333333 0.820080174516139 0.254977182082558 0.238750820050703 1.27267366806567 Q6PJ61 FBXO46 Q6PJ61.S128.p_FBXO46 Q6PJ61_S128s _1_1_128_128 Q6PJ61 Q6PJ61 F-box only protein 46 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6656.6656.3 9.44 9.44 1.109 3 1 1 0 500.2412 1418.7428 S128s TMT10 122 (K) GHWGSDsSK (A) GHWGS(0.0)DS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S FBXO46 65770.7 1 1 4010.1 39.15 HUMAN 1 0.8614 5.935 KGIFGFRS_______-p Q9UHB9;S627-p KGIFGFRS_______ 0.308585385551654 0.0240742085490205 -0.151333333333333 -0.302333333333333 9.5449888013246 22.0576316998244 -0.151333333333333 -0.302333333333333 0.111045539873947 0.00622639731294929 -1.9027559303139 -4.33052578824475 Q9UHB9 SRP68 Q9UHB9.S627.p_SRP68 Q9UHB9_S627s _1_1_627_627 Q9UHB9 Q9UHB9 Signal recognition particle subunit SRP68 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21388.21388.2 7.52 7.52 99 1 1 1 0 546.776 1012.5777 S627s TMT10 621 (K) GIFGFRs (-) GIFGFRS(1.0) s:Phosphorylated S SRP68 71241.8 1 5 2177.1 94.49 HUMAN 1 -9.545 -22.0576 KGIGLDESELDSEAE-p Q96RS0;S85-p KGIGLDESELDSEAE 0.496945567131767 0.661747172181153 -0.110333333333333 0.0473333333333333 5.59357821823366 2.45481225114478 -0.110333333333333 0.0473333333333334 0.275830431090656 0.568222955745713 -1.21180836662394 0.607246676902978 Q96RS0 TGS1 Q96RS0.S85.p_TGS1 Q96RS0_S85s _1_1_85_85 Q96RS0 Q96RS0 Trimethylguanosine synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27948.27948.3 13.28 13.28 4.943 2 1 1 0 725.0034 2093.027 S85s TMT10 79 (K) GIGLDEsELDSEAELMR (S) GIGLDES(0.99)ELDS(0.0)EAELMR s:Phosphorylated S TGS1 97473.9 1 2 1387.1 147.41 HUMAN 1 -5.5936 2.4548 KGIWKPETPQDSSGL-p Q641Q2;T935-p KGIWKPETPQDSSGL 0.827264797305235 0.0609926566690015 0.0346666666666667 -0.239666666666667 1.5848355157046 16.1798216345278 0.0346666666666667 -0.239666666666667 0.694250895211191 0.0241000440593926 0.41476319618408 -3.10057304919167 Q641Q2 FAM21A Q641Q2.T935.p_FAM21A Q641Q2_T935t _1_1_935_935 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|F8W7U3 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24485.24485.4 13.03 11.09 2.216 3 1 1 0 682.12 2645.4906 T935t TMT10 929 (K) GIWKPEtPQDSSGLAPFK (T) GIWKPET(0.99)PQDS(0.0)S(0.0)GLAPFK K:TMT10,t:Phosphorylated T WASHC2A 147352.2 1 52 12.1 1178.3 HUMAN 1 1.5848 -16.1798 KGKADDMSDDQGTSV-p Q13111;S54-p KGKADDMSDDQGTSV 0.16541735067902 0.00261168545628943 -0.233333333333333 -0.903666666666667 15.6415331142654 39.3321510484656 -0.233333333333333 -0.903666666666667 0.0272801458927077 0.000116623184260625 -2.99965956414338 -9.83498988198254 Q13111 CHAF1A Q13111.S54.p_CHAF1A Q13111_S54s _1_1_54_54 Q13111 Q13111|Q13111-3|Q13111-2 Chromatin assembly factor 1 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8295.8295.3 17.12 17.12 5.053 4 1 1 0 846.0789 2456.2542 S54s TMT10 48 (K) GKADDMsDDQGTSVQSK (S) GKADDMS(0.99)DDQGT(0.0)S(0.0)VQS(0.0)K K:TMT10,s:Phosphorylated S CHAF1A 108122.1 2 1 633.1 256.49 HUMAN 1 -15.6415 -39.3322 KGKCSDSSLLGKRLS-p Q9NYP9;S29-p KGKCSDSSLLGKRLS 0.877877639397482 0.0153442858800187 -0.024 -0.388 1.11306960215797 25.0922640499722 -0.024 -0.388 0.773914600044734 0.00309580498340882 -0.302005117708599 -5.06083547503469 Q9NYP9 MIS18A Q9NYP9.S29.p_MIS18A Q9NYP9_S29s _1_1_29_29 Q9NYP9 Q9NYP9 Protein Mis18-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12785.12785.3 9.3 4.94 1.386 3 1 1 0 640.3495 1839.0613 S29s TMT10 23 (K) GKCSDSsLLGK (R) GKCS(0.0)DS(0.0)S(0.99)LLGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MIS18A 26833 6 1 1982.1 104.28 HUMAN 1 -1.1131 -25.0923 KGKGSLGSQGAKDEP-p E7ETY2;S1410-p KGKGSLGSQGAKDEP 0.675313051875311 0.0121245195383645 0.067 -0.446333333333333 3.19483979791144 26.7631066971183 0.067 -0.446333333333333 0.479199129228931 0.00210712029598445 0.759716096143224 -5.49712916625786 E7ETY2 TCOF1 E7ETY2.S1410.p_TCOF1 E7ETY2_S1410s _1_1_1410_1410 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14454.14454.3 14.04 9.85 1.835 2 1 1 0 890.457 2589.3975 S1410s TMT10 1406 (K) GSLGsQGAKDEPEEELQK (G) GS(0.0)LGS(0.99)QGAKDEPEEELQK K:TMT10,s:Phosphorylated S TCOF1 152529.5 6 35 19.1 1034.65 HUMAN 1 3.1948 -26.7631 KGKGTNSSDSEELSA-p Q4LE39;S1153-p KGKGTNSSDSEELSA 0.451823780329444 0.259071087958793 0.1 0.113333333333333 6.36766735274633 7.72732788789519 0.1 0.113333333333333 0.230798650283316 0.168759104121613 1.34980636289872 1.58733542035761 Q4LE39 ARID4B Q4LE39.S1153.p_ARID4B Q4LE39_S1153s _1_1_1153_1153 Q4LE39 Q4LE39|Q4LE39-2 AT-rich interactive domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14809.14809.2 16.67 16.67 1.378 7 1 1 0 1175.5522 2270.14 S1153s TMT10 1149 (K) GTNSsDSEELSAGESITK (S) GT(0.0)NS(0.0)S(0.99)DS(0.0)EELS(0.0)AGES(0.0)IT(0.0)K K:TMT10,s:Phosphorylated S ARID4B 148890.9 3 15 191.1 463.89 HUMAN 1 6.3677 7.7273 KGKHSLDSDEEEDDD-p O95400;S49-p KGKHSLDSDEEEDDD 0.301388028326366 0.0792603482411338 -0.193 0.342333333333333 9.77384631897575 14.6099655938802 -0.193 0.342333333333333 0.105345349448297 0.0345942118473155 -1.94244527423506 2.80384338492682 O95400 CD2BP2 O95400.S49.p_CD2BP2 O95400_S49s _1_1_49_49 O95400 O95400 CD2 antigen cytoplasmic tail-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19658.19658.5 30.14 24.41 1.242 8 1 1 0 1076.1034 5296.498 S49s TMT10 43 (K) GKHSLDsDEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR (I) GKHS(0.0)LDS(0.99)DEEEDDDDGGS(0.0)S(0.0)KY(0.0)DILAS(0.0)EDVEGQEAAT(0.0)LPS(0.0)EGGVR K:TMT10,s:Phosphorylated S CD2BP2 37759.9 8 1 852.1 212.12 HUMAN 1 -9.7738 14.61 KGKPKPRSPQPPSRQ-p E7ERS3;S511-p KGKPKPRSPQPPSRQ 0.308523940457767 0.945749890800652 0.179666666666667 -0.0106666666666667 9.54635586827499 0.349647359875272 0.179666666666667 -0.0106666666666667 0.111010590593305 0.922646341510212 1.90299289746162 -0.101704787049337 E7ERS3 ZC3H18 E7ERS3.S511.p_ZC3H18 E7ERS3_S511s _1_1_511_511 E7ERS3 E7ERS3|Q86VM9|Q86VM9-2 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.3862.4065.5 11.54 11.54 3.091 2 1 1 0 440.6605 2119.3067 S511s TMT10 505 (K) GKPKPRsPQPPSR (Q) GKPKPRS(0.99)PQPPS(0.0)R K:TMT10,s:Phosphorylated S ZC3H18 109165.8 11 10 157.1 499.97 HUMAN 1 9.5464 -0.3496 KGKQQQKSPVKARAS-p P22492;S181-p KGKQQQKSPVKARAS 0.137325721125408 0.00814122313879809 1.24933333333333 -0.634333333333333 17.6695812837908 29.7686691846257 1.24933333333333 -0.634333333333333 0.0171018019069375 0.00105471004332592 3.39570093898651 -6.35208188542338 P22492 HIST1H1T P22492.S181.p_HIST1H1T P22492_S181s _1_1_181_181 P22492 P22492 Histone H1t HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4913.4913.4 7.01 2.35 99 1 1 1 0 531.8236 2044.3049 S181s TMT10 175 (K) GKQQQKsPVK (A) GKQQQKS(1.0)PVK K:TMT10,s:Phosphorylated S HIST1H1T 22018.6 1 29 738.5 234.77 HUMAN 1 17.6696 -29.7687 KGKRRRSSDEDAAGE-p Q9BUI4;S205-p KGKRRRSSDEDAAGE 0.605680925442383 0.780047555710737 0.08 -0.0306666666666666 4.02425125974327 1.49352192793462 0.08 -0.0306666666666666 0.395890311952769 0.709002566384573 0.921762423756088 -0.393427424472351 Q9BUI4 POLR3C Q9BUI4.S205.p_POLR3C Q9BUI4_S205s _1_1_205_205 Q9BUI4 Q9BUI4|E9PHH9 DNA-directed RNA polymerase III subunit RPC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3054.3054.2 12.71 12.71 1.179 2 1 1 0 785.8524 1490.7284 S205s Hydrogen 203 (R) RSsDEDAAGEPK (A) RS(0.0)S(0.99)DEDAAGEPK K:TMT10-Lys-Only,s:Phosphorylated S POLR3C 61009.9 11 2 3104.1 60.54 HUMAN 1 4.0243 -1.4935 KGKRVGGSIRPWKQM-p Q5T5U3;S953-p KGKRVGGSIRPWKQM 0.237990270998614 0.0608644269067254 -0.327 0.396 11.9240815581751 16.1951801374005 -0.327 0.396 0.0642083994461223 0.0240149665613493 -2.3188759843207 3.10353098796457 Q5T5U3 ARHGAP21 Q5T5U3.S953.p_ARHGAP21 Q5T5U3_S953s _1_1_953_953 Q5T5U3 Q5T5U3|A0A1B0GV73|F8W9U9|Q5T5U3-3 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15033.15033.3 10.58 10.58 99 1 1 1 0 513.2924 1457.8993 S953s TMT10 950 (R) VGGsIRPWK (Q) VGGS(1.0)IRPWK K:TMT10,s:Phosphorylated S ARHGAP21 218696.3 3 16 148.1 512.52 HUMAN 1 -11.9241 16.1952 KGKSAKSSIISKKKR-p P46100;S801-p KGKSAKSSIISKKKR 0.588938726682811 0.912672959689659 -0.0723333333333333 0.02 4.23412988412333 0.555694617908972 -0.0723333333333334 0.02 0.377213312726056 0.879894368644998 -0.961627445122161 0.158373113203793 P46100 ATRX P46100.S801.p_ATRX P46100_S801s _1_1_801_801 P46100 P46100|P46100-4|P46100-3 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11243.11243.3 7.76 7.76 7.764 4 1 1 0 563.338 1608.0299 S801s TMT10 797 (K) SAKSsIISK (K) S(0.0)AKS(0.0)S(0.99)IIS(0.0)K K:TMT10,s:Phosphorylated S ATRX 285034.2 1 21 18.1 1035.36 HUMAN 1 -4.2341 0.5557 KGKVGRPTASKASKE-p Q9H1E3;T193-p KGKVGRPTASKASKE 0.396157665973068 0.0575400635754663 -0.129666666666667 0.253333333333333 7.4212178977215 16.519619972372 -0.129666666666667 0.253333333333333 0.181083220735443 0.0222863015611765 -1.53456217221827 3.16628163827011 Q9H1E3 NUCKS1 Q9H1E3.T193.p_NUCKS1 Q9H1E3_T193t _1_1_193_193 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5292.5292.3 8.71 4.05 2.586 2 1 1 0 451.9267 1273.7992 T193t TMT10 189 (K) VGRPtASK (A) VGRPT(0.99)AS(0.0)K K:TMT10,t:Phosphorylated T NUCKS1 27295.9 3 14 48.1 767.83 HUMAN 1 -7.4212 16.5196 KGKYKEETIEKMQE_-p P61254;T139-p KGKYKEETIEKMQE_ 0.0721955710812666 0.0165213773436153 -0.374666666666667 -0.41 24.5723591565171 24.6094881450035 -0.374666666666667 -0.41 0.00348950708424304 0.0034598015228712 -4.93627751325215 -4.93950725131421 P61254 RPL26 P61254.T139.p_RPL26 P61254_T139t _1_1_139_139 P61254 P61254 60S ribosomal protein L26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10511.10511.3 10.47 10.47 10.473 2 1 1 0 602.9999 1727.0194 T139t TMT10 135 (K) YKEEtIEK (M) Y(0.0)KEET(0.99)IEK K:TMT10,t:Phosphorylated T RPL26 17257.9 2 4 2947.1 65.03 HUMAN 1 -24.5724 -24.6095 KGLAAEDSGGDSKDL-p P41227;S205-p KGLAAEDSGGDSKDL 0.335011871726365 0.0337360486631494 -0.161 0.304 8.85987741273936 19.8429098330484 -0.161 0.304 0.130020627812575 0.0103683349027158 -1.78410724622239 3.84175904110809 P41227 NAA10 P41227.S205.p_NAA10 P41227_S205s _1_1_205_205 P41227 P41227|P41227-2 N-alpha-acetyltransferase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17952.17952.5 19 21.18 1.181 13 1 1 0 887.0107 4351.0523 S205s TMT10 199 (K) GLAAEDsGGDSKDLSEVSETTESTDVKDSSEASDSAS (-) GLAAEDS(0.99)GGDS(0.0)KDLS(0.0)EVS(0.0)ET(0.0)T(0.0)ES(0.0)T(0.0)DVKDS(0.0)S(0.0)EAS(0.0)DS(0.0)AS(0.0) K:TMT10,s:Phosphorylated S NAA10 26629.2 4 4 1452.1 140.76 HUMAN 1 -8.8599 19.8429 KGLAGAVSELLRSAQ-p Q9Y490;S620-p KGLAGAVSELLRSAQ 0.280300045452637 0.178788388097215 -0.153666666666667 -0.134666666666667 10.4392108624688 9.83424509058935 -0.153666666666667 -0.134666666666667 0.0903813686839415 0.103890417353523 -2.05813054020929 -1.95215231112543 Q9Y490 TLN1 Q9Y490.S620.p_TLN1 Q9Y490_S620s _1_1_620_620 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29433.29433.2 13.16 8.22 99 1 1 1 0 697.8839 1314.7943 S620s TMT10 614 (K) GLAGAVsELLR (S) GLAGAVS(1.0)ELLR s:Phosphorylated S TLN1 271930.4 2 7 267.1 395.2 HUMAN 1 -10.4392 -9.8342 KGLDRSNSWVNTGGP-p Q96N67-6;S929-p KGLDRSNSWVNTGGP 0.579620983145557 0.672986498743151 0.073 0.0723333333333333 4.35630829980523 2.35292849257156 0.073 0.0723333333333334 0.366749195643781 0.581710831865464 0.984654454891467 0.585543223923879 Q96N67 DOCK7 Q96N67.6.S929.p_DOCK7 Q96N67-6_S929s _1_1_929_929 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13648.13648.2 14.98 14.98 2.581 3 1 1 0 842.9259 1604.8797 S929s TMT10 927 (R) SNsWVNTGGPK (A) S(0.0)NS(0.99)WVNT(0.0)GGPK K:TMT10,s:Phosphorylated S DOCK7 243551.1 6 16 345.1 352.4 HUMAN 1 4.3563 2.3529 KGLGLDESGLAKQAA-p Q9Y265;S29-p KGLGLDESGLAKQAA 0.730914942318027 0.0879553158234581 0.0486666666666667 0.187333333333333 2.58357621934159 13.976548176638 0.0486666666666667 0.187333333333333 0.551623015513568 0.040026275688939 0.634484056013225 2.68700509791917 Q9Y265 RUVBL1 Q9Y265.S29.p_RUVBL1 Q9Y265_S29s _1_1_29_29 Q9Y265 Q9Y265|Q9Y265-2 RuvB-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20443.20443.2 13.85 6.85 99 1 1 1 0 799.4354 1517.8939 S29s TMT10 23 (K) GLGLDEsGLAK (Q) GLGLDES(1.0)GLAK K:TMT10,s:Phosphorylated S RUVBL1 50569.4 2 2 3456.1 50.49 HUMAN 1 2.5836 13.9765 KGLGLPLSPVRPRLP-p O43593;S833-p KGLGLPLSPVRPRLP 0.134150744259901 0.441414982606085 -0.261666666666667 -0.163333333333333 17.9543842730099 4.72915748614054 -0.261666666666667 -0.163333333333333 0.0160162770522468 0.336576857601593 -3.45303944032405 -1.05397927805952 O43593 HR O43593.S833.p_HR O43593_S833s _1_1_833_833 O43593 O43593|O43593-2 Lysine-specific demethylase hairless HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20182.20182.3 11.96 11.96 99 1 1 1 0 524.3056 1490.9368 S833s TMT10 827 (K) GLGLPLsPVRPR (L) GLGLPLS(1.0)PVRPR s:Phosphorylated S HR 130059.7 1 4 3078.1 61.36 HUMAN 1 -17.9544 -4.7292 KGLKHVTSNASDSES-p Q12959;S684-p KGLKHVTSNASDSES 0.51428507339171 0.852622490806139 -0.110333333333333 0.019 5.33223121436261 0.974105267861988 -0.110333333333333 0.019 0.292938786771901 0.799078550624423 -1.16460770171135 0.267344093305523 Q12959 DLG1 Q12959.S684.p_DLG1 Q12959_S684sS687s_2_2_684_687 Q12959 Q12959 Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5703.5703.2 7.5 7.5 1.111 7 2 2 0 964.8857 1768.8299 S684s S687s TMT10 681 (K) HVTsNAsDSESSYR (G) HVT(0.0)S(0.99)NAS(0.99)DS(0.0)ES(0.0)S(0.0)Y(0.0)R s:Phosphorylated S DLG1 100738.4 3 4 196.99 460.79 HUMAN 1 -5.3322 0.9741 KGLKRAASAIYRLFD-p Q9UKM9-2;S106-p KGLKRAASAIYRLFD 0.504677687418261 0.451534163853148 0.203 0.114 5.48375974861335 4.60262009580035 0.203 0.114 0.282894188049742 0.346527727423157 1.19201743996306 1.0305108244641 Q9UKM9 RALY Q9UKM9.2.S106.p_RALY Q9UKM9-2_S106s _1_1_106_106 Q9UKM9-2 Q9UKM9-2 Isoform 1 of RNA-binding protein Raly HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5847.5847.3 9.22 9.22 9.221 2 1 1 0 406.218 1136.6738 S106s TMT10 103 (K) RAAsAIYR (L) RAAS(0.99)AIY(0.0)R s:Phosphorylated S RALY 30420.5 3 5 967.1 193.88 HUMAN 1 5.4838 4.6026 KGLLKLLSGASTKRK-p Q7Z6J0;S724-p KGLLKLLSGASTKRK 0.911196518625019 0.112700573633016 0.0223333333333333 -0.311 0.792990903857118 12.5035275280148 0.0223333333333333 -0.311 0.833107241829159 0.0561884752642027 0.221114692191188 -2.42071020552882 Q7Z6J0 SH3RF1 Q7Z6J0.S724.p_SH3RF1 Q7Z6J0_S724s _1_1_724_724 Q7Z6J0 Q7Z6J0 E3 ubiquitin-protein ligase SH3RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16055.16055.2 8.71 1.19 2.265 3 1 1 0 657.8757 1234.7771 S724s TMT10 722 (K) LLsGASTK (R) LLS(0.99)GAS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S SH3RF1 94268.4 1 4 2961.1 64.64 HUMAN 1 0.793 -12.5035 KGLNGCESPDADDYF-p Q02078-2;S98-p KGLNGCESPDADDYF 0.308133105029726 0.104828823135371 -0.144333333333333 0.181333333333333 9.55603182778911 12.9419891678197 -0.144333333333333 0.181333333333333 0.110763537420205 0.0507926747235186 -1.9046701626246 2.49925498533157 Q02078 MEF2A Q02078.2.S98.p_MEF2A Q02078-2_S98s _1_1_98_98 Q02078-2 Q02078-2|Q02078-6|Q02078-4|Q02078-7|Q02078-8 Isoform MEFA of Myocyte-specific enhancer factor 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21163.21163.4 20.57 20.57 4.792 5 1 1 0 878.3915 3430.5898 S98s TMT10 92 (K) GLNGCEsPDADDYFEHSPLSEDRFSK (L) GLNGCES(0.99)PDADDY(0.0)FEHS(0.0)PLS(0.0)EDRFS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MEF2A 54612.1 2 3 2279.1 89.95 HUMAN 1 -9.556 12.942 KGLPDFASFSAKL__-p Q9NUI1;S287-p KGLPDFASFSAKL__ 0.947677133293993 0.0640750290218265 -0.01 0.211666666666667 0.463280232552207 15.8846287195163 -0.01 0.211666666666667 0.898818446203811 0.0257950947853254 -0.133240041196109 3.04393735677138 Q9NUI1 DECR2 Q9NUI1.S287.p_DECR2 Q9NUI1_S287s _1_1_287_287 Q9NUI1 Q9NUI1|Q4VXZ8|Q9NUI1-3 Peroxisomal 2,4-dienoyl-CoA reductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33561.33561.2 12.58 11.28 2.301 2 1 1 0 895.9767 1710.9831 S287s TMT10 281 (K) GLPDFAsFSAKL (-) GLPDFAS(0.99)FS(0.0)AKL K:TMT10,s:Phosphorylated S DECR2 31119.3 7 2 4237.1 34.97 HUMAN 1 -0.4633 15.8846 KGLQHQVSQISKQQS-p Q6ZU80;S331-p KGLQHQVSQISKQQS 0.35478576387431 0.0466050236145305 0.146 -0.26 8.36330607422 17.8135393388263 0.146 -0.26 0.145770415799556 0.0165442112211055 1.69813329251828 -3.42186222684037 Q6ZU80 CEP128 Q6ZU80.S331.p_CEP128 Q6ZU80_S331s _1_1_331_331 Q6ZU80 Q6ZU80|Q6ZU80-1|Q6ZU80-3 Centrosomal protein of 128 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11482.11482.3 12.27 12.27 2.319 2 1 1 0 588.3256 1682.9954 S331s TMT10 325 (K) GLQHQVsQISK (Q) GLQHQVS(0.99)QIS(0.0)K K:TMT10,s:Phosphorylated S CEP128 128640.5 2 8 1261.1 161 HUMAN 1 8.3633 -17.8135 KGLQRTLSDESLCSG-p O60292;S1544-p KGLQRTLSDESLCSG 0.90552186362789 0.310856472520863 0.0196666666666667 0.106333333333333 0.846184557459251 6.70560254256606 0.0196666666666667 0.106333333333333 0.82296533886055 0.213520582585911 0.234837574821599 1.4090025603821 O60292 SIPA1L3 O60292.S1544.p_SIPA1L3 O60292_S1544s _1_1_1544_1544 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8402.8402.3 15.58 12.73 1.106 4 1 1 0 563.9328 1609.8165 S1544s TMT10 1542 (R) TLsDESLCSGRR (E) T(0.0)LS(0.99)DES(0.0)LCS(0.0)GRR C:Carbamidomethylation,s:Phosphorylated S SIPA1L3 195918.6 7 23 144.1 520.25 HUMAN 1 0.8462 6.7056 KGLQRVRSAGFEPSD-p H3BQB6;S224-p KGLQRVRSAGFEPSD 0.244862108764088 0.00971279204227282 -0.227 0.557666666666667 11.6852453916574 28.3384405155105 -0.227 0.557666666666667 0.0678383788345246 0.00146607419107427 -2.2766271077367 5.93336713316008 H3BQB6 STMND1 H3BQB6.S224.p_STMND1 H3BQB6_S224s _1_1_224_224 H3BQB6 H3BQB6 Stathmin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16907.16907.3 20.33 20.33 9.625 2 1 1 0 723.7173 2089.1694 S224s Hydrogen 224 (R) sAGFEPSDLQGGKPLK (R) S(0.99)AGFEPS(0.0)DLQGGKPLK K:TMT10-Lys-Only,s:Phosphorylated S STMND1 31154.5 1 5 1973.1 104.66 HUMAN 1 -11.6852 28.3384 KGLSEDVSISKFFDD-p Q15029;S948-p KGLSEDVSISKFFDD 0.0825441086817992 0.860545032008793 -0.474666666666667 -0.0223333333333333 23.1515021257585 0.919689712655626 -0.474666666666667 -0.0223333333333333 0.00484004932340604 0.809153708152926 -4.59033401089359 -0.25358560210914 Q15029 EFTUD2 Q15029.S948.p_EFTUD2 Q15029_S948s _1_1_948_948 Q15029 Q15029|Q15029-3|Q15029-2 116 kDa U5 small nuclear ribonucleoprotein component HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16201.16201.2 14.43 14.43 2.413 3 1 1 0 786.918 1492.8623 S948s TMT10 942 (K) GLSEDVsISK (F) GLS(0.0)EDVS(0.99)IS(0.0)K K:TMT10,s:Phosphorylated S EFTUD2 110403.7 2 4 1913.1 107.79 HUMAN 1 -23.1515 -0.9197 KGLSPAMSPALQRLV-p Q96DF8;S395-p KGLSPAMSPALQRLV 0.751873021779918 0.619635871327761 0.051 0.0516666666666667 2.36231268715244 2.82538864340041 0.051 0.0516666666666667 0.580455233567028 0.521748411693145 0.587623545144506 0.684625068524219 Q96DF8 DGCR14 Q96DF8.S395.p_DGCR14 Q96DF8_S395s _1_1_395_395 Q96DF8 Q96DF8 Protein DGCR14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15760.15760.2 16.26 9.27 1.847 2 1 1 0 768.8939 1456.8144 S395s TMT10 389 (K) GLSPAMsPALQR (L) GLS(0.0)PAMS(0.99)PALQR s:Phosphorylated S DGCR14 52624.2 4 7 924.1 199.86 HUMAN 1 2.3623 2.8254 KGLVSPQSPQKSDCQ-p P41182;S333-p KGLVSPQSPQKSDCQ 0.314368771925545 0.374036975811735 0.140666666666667 0.135666666666667 9.40320309409397 5.66773009791588 0.140666666666667 0.135666666666667 0.114730712485317 0.271160852246886 1.8781851989095 1.22486180744313 P41182 BCL6 P41182.S333.p_BCL6 P41182_S333s _1_1_333_333 P41182 P41182|P41182-2 B-cell lymphoma 6 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12129.12129.4 17.84 17.84 1.128 8 1 1 0 868.9229 3392.7029 S333s TMT10 327 (K) GLVSPQsPQKSDCQPNSPTESCSSK (N) GLVS(0.0)PQS(0.99)PQKS(0.0)DCQPNS(0.0)PT(0.0)ES(0.0)CS(0.0)S(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BCL6 80670.9 4 6 557.1 273.04 HUMAN 1 9.4032 5.6677 KGNEAVASRDLSENN-p Q8NBJ4;S187-p KGNEAVASRDLSENN 0.178115895866256 0.11951984583337 -0.268333333333333 0.209666666666667 14.8059323394039 12.1633109925607 -0.268333333333333 0.209666666666667 0.033067911455017 0.0607671545443539 -2.84213224945567 2.36013879479521 Q8NBJ4 GOLM1 Q8NBJ4.S187.p_GOLM1 Q8NBJ4_S187s _1_1_187_187 Q8NBJ4 Q8NBJ4|Q8NBJ4-2 Golgi membrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5348.5348.3 13.99 8.34 2.093 2 1 1 0 847.7538 2461.2795 S187s TMT10 180 (K) KGNEAVAsRDLSENNDQR (Q) KGNEAVAS(0.99)RDLS(0.0)ENNDQR K:TMT10,s:Phosphorylated S GOLM1 45503.6 5 1 1754.1 117.54 HUMAN 1 -14.8059 12.1633 KGNGSGGSRENSTVD-p Q9Y6M7-13;S288-p KGNGSGGSRENSTVD 0.187294971032731 0.0640163648681066 -0.257 -0.215333333333333 14.2774213647148 15.8901821398294 -0.257 -0.215333333333333 0.0373471841897211 0.0257621311030251 -2.74399726609528 -3.04499907887988 Q9Y6M7 SLC4A7 Q9Y6M7.13.S288.p_SLC4A7 Q9Y6M7-13_S288s _1_1_288_288 Q9Y6M7-13 Q9Y6M7-7|Q9Y6M7-8|Q9Y6M7-2|Q9Y6M7-3|Q9Y6M7-4|Q9Y6M7-10|Q9Y6M7-14|Q9Y6M7-11|E9PFN4|Q9Y6M7-12|A0A0A0MST8|Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-9 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4569.4569.3 10.85 10.85 2.866 3 1 1 0 581.9652 1663.9128 S288s TMT10 277 (K) SGEIKGNGSGGsR (E) S(0.0)GEIKGNGS(0.0)GGS(0.99)R K:TMT10,s:Phosphorylated S SLC4A7 128884.6 18 9 207.1 445.25 HUMAN 1 -14.2774 -15.8902 KGNKPWISLPRGKGI-p P62701;S237-p KGNKPWISLPRGKGI 0.456857645261996 0.0298939757454492 -0.116 -0.344333333333333 6.26887422495075 20.630458346184 -0.116 -0.344333333333333 0.23610901939722 0.008648766365141 -1.33232325770319 -4.01167312078525 P62701 RPS4X P62701.S237.p_RPS4X P62701_S237s _1_1_237_237 P62701 P62701 40S ribosomal protein S4, X isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19714.19714.3 10.23 3.08 99 1 1 1 0 569.3234 1625.9892 S237s TMT10 231 (K) GNKPWIsLPR (G) GNKPWIS(1.0)LPR K:TMT10,s:Phosphorylated S RPS4X 29825.4 2 5 2942.1 65.29 HUMAN 1 -6.2689 -20.6305 KGPGQPSSPQRLDRL-p O95400;S195-p KGPGQPSSPQRLDRL 0.349328106249248 0.220168600341029 0.193666666666667 -0.199333333333333 8.48514642353608 8.65289834134861 0.193666666666667 -0.199333333333333 0.141737692339844 0.136367276161119 1.71923455759656 -1.74767619427428 O95400 CD2BP2 O95400.S195.p_CD2BP2 O95400_S195s _1_1_195_195 O95400 O95400 CD2 antigen cytoplasmic tail-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5264.5264.4 8.71 8.71 1.369 2 1 1 0 516.0314 1981.1343 S195s TMT10 188 (R) KGPGQPSsPQRLDR (L) KGPGQPS(0.0)S(0.99)PQRLDR K:TMT10,s:Phosphorylated S CD2BP2 37759.9 18 3 852.1 212.12 HUMAN 1 8.4851 -8.6529 KGPHVDVSGPDIDIE-p Q09666;S2423-p KGPHVDVSGPDIDIE 0.546344237168964 0.011831190253862 0.178333333333333 0.636 4.8458257002377 26.9312639224154 0.178333333333333 0.636016556249667 0.32765547554748 0.00202709269112946 1.07572764179562 5.54250653324206 Q09666 AHNAK Q09666.S2423.p_AHNAK Q09666_S2423s _1_1_2423_2423 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19400.19400.3 20.65 20.65 99 1 1 1 0 819.4111 2376.2447 S2423s TMT10 2417 (K) GPHVDVsGPDIDIEGPEGK (L) GPHVDVS(1.0)GPDIDIEGPEGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 70 1.1 4313.36 HUMAN 1 4.8458 26.9313 KGPKGALSPGGFDDS-p O00192;S864-p KGPKGALSPGGFDDS 0.342398361264446 0.089900013668331 0.151333333333333 -0.192333333333333 8.64749133025322 13.8459734151277 0.151333333333333 -0.192333333333333 0.136537160558481 0.0412479774727766 1.74734249932519 -2.66310600885322 O00192 ARVCF O00192.S864.p_ARVCF O00192_S864s _1_1_864_864 O00192 O00192|E9PDC3|O00192-2|C9JJX6 Armadillo repeat protein deleted in velo-cardio-facial syndrome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29013.29013.3 11.6 11.6 1.139 3 1 1 0 776.4052 2247.2273 S864s TMT10 861 (K) GALsPGGFDDSTLPLVDK (S) GALS(0.99)PGGFDDS(0.0)T(0.0)LPLVDK K:TMT10,s:Phosphorylated S ARVCF 105324.7 1 8 772.1 227.53 HUMAN 1 8.6475 -13.846 KGPKVDVSAPDVEMQ-p Q09666;S983-p KGPKVDVSAPDVEMQ 0.211864021178947 0.0327568992683368 0.190666666666667 0.311666666666667 13.0130286281478 20.0325397787186 0.190666666666667 0.311666666666667 0.0499685948752609 0.00992535438321672 2.51341487694006 3.88229686446573 Q09666 AHNAK Q09666.S983.p_AHNAK Q09666_S983s _1_1_983_983 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24443.24443.4 17.8 17.8 99 1 1 1 0 763.1455 2969.601 S983s TMT10 977 (K) GPKVDVsAPDVEMQGPDWNLK (M) GPKVDVS(1.0)APDVEMQGPDWNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 42 1.1 4313.36 HUMAN 1 13.013 20.0325 KGPPDFSSDEEREPT-p P42166;S67-p KGPPDFSSDEEREPT 0.920347075412882 0.0976416870734961 0.0146666666666667 -0.194666666666667 0.704657419025317 13.3591328421905 0.0146666666666667 -0.194666666666667 0.850225758207448 0.0461409695251383 0.198060655338772 -2.57452716522912 P42166 TMPO P42166.S67.p_TMPO P42166_S66sS67s_2_2_66_67 P42166 P42166|P42167|G5E972|P42167-2|P42167-3 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17726.18149.5 14.32 14.32 0.691 6 2 2 0 885.2294 4261.2002 N49n S66s S67s TMT10 49 (R) nRPPLPAGTNSKGPPDFssDEEREPTPVLGSGAAAAGR (S) N(0.50)RPPLPAGT(0.0)N(0.50)S(0.0)KGPPDFS(0.99)S(0.99)DEEREPT(0.0)PVLGS(0.0)GAAAAGR K:TMT10,n:Deamidated,s:Phosphorylated S TMPO 76061.2 47 27 123.1 546.19 HUMAN 1 0.7047 -13.3591 KGPSKAASDDGSLKS-p Q92614;S1998-p KGPSKAASDDGSLKS 0.455840880261612 0.263319909715508 0.114666666666667 0.123666666666667 6.29223374674927 7.63525064809583 0.114666666666667 0.123666666666667 0.234842462332914 0.172375260374498 1.33646012830753 1.57134034801938 Q92614 MYO18A Q92614.S1998.p_MYO18A Q92614_S1998s _1_1_1998_1998 Q92614 Q92614|Q92614-4|A0A0D9SFK2 Unconventional myosin-XVIIIa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9000.9708.2 11.84 11.84 1.353 2 1 1 0 701.3553 1321.7364 S1998s TMT10 1996 (K) AAsDDGSLK (S) AAS(0.99)DDGS(0.0)LK K:TMT10,s:Phosphorylated S MYO18A 234309.1 2 11 783.1 225.59 HUMAN 1 6.2922 7.6353 KGPSRASSVTTFTGE-p P52943;S115-p KGPSRASSVTTFTGE 0.182003668118224 0.113740006812717 0.227333333333333 -0.209 14.5668634230891 12.4509867234656 0.227333333333333 -0.209 0.0349392563906441 0.0568723701300427 2.79760388029225 -2.41133536758498 P52943 CRIP2 P52943.S115.p_CRIP2 P52943_S115s _1_1_115_115 P52943 P52943-2 Cysteine-rich protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13118.13118.2 16.32 16.32 1.515 6 1 1 0 1017.4639 1953.9538 S115s TMT10 113 (R) ASsVTTFTGEPNTCPR (C) AS(0.0)S(0.99)VT(0.0)T(0.0)FT(0.0)GEPNT(0.0)CPR C:Carbamidomethylation,s:Phosphorylated S CRIP2 23291.1 2 5 1870.1 109.93 HUMAN 1 14.5669 -12.451 KGPSYGLSAEVKNKI-p Q15417;S13-p KGPSYGLSAEVKNKI 0.107878237248119 0.34914169115162 -0.441333333333333 0.111 20.3716276160021 6.05914562305127 -0.441333333333333 0.111 0.00917988495224714 0.247790948277961 -3.95916346882975 1.29478217952095 Q15417 CNN3 Q15417.S13.p_CNN3 Q15417_S13s _1_1_13_13 Q15417 B4DUT8|Q15417|Q99439|B4DDF4|Q15417-3|Q99439-2|K7ES69 Calponin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16933.16933.3 12.2 12.2 6.265 3 1 1 0 549.2929 1565.8939 S13s TMT10 7 (K) GPSYGLsAEVK (N) GPS(0.0)Y(0.0)GLS(0.99)AEVK K:TMT10,s:Phosphorylated S CNN3 36584.2 1 6 1713.1 119.85 HUMAN 1 -20.3716 6.0591 KGPVGTVSEAQLARR-p Q9NZM1;S174-p KGPVGTVSEAQLARR 0.539477686033971 0.587929466421331 0.101333333333333 -0.082 4.95367440693467 3.11707096922328 0.101333333333333 -0.082 0.319618978601518 0.487857406923922 1.09556180612917 -0.743985274167012 Q9NZM1 MYOF Q9NZM1.S174.p_MYOF Q9NZM1_S174s _1_1_174_174 Q9NZM1 Q9NZM1|Q9NZM1-3|Q9NZM1-6|Q9NZM1-2|Q9NZM1-5 Myoferlin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13832.13832.3 17.24 17.24 2.187 2 1 1 0 753.7476 2179.2599 S174s TMT10 163 (R) GPGPKGPVGTVsEAQLAR (R) GPGPKGPVGT(0.0)VS(0.99)EAQLAR K:TMT10,s:Phosphorylated S MYOF 236244.8 4 1 829.1 216.58 HUMAN 1 4.9537 -3.1171 KGQNGDDSSAGGDFP-p O94992;S97-p KGQNGDDSSAGGDFP 0.761087920993582 0.134052303126823 -0.0523333333333333 0.264333333333333 2.27559930445437 11.5027366865183 -0.0523333333333334 0.264333333333333 0.59216136595947 0.0707499816161458 -0.569005984646602 2.24336625043307 O94992 HEXIM1 O94992.S97.p_HEXIM1 O94992_S97sS98s_2_2_97_98 O94992 O94992 Protein HEXIM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25082.25082.4 10.68 10.68 6.232 5 2 2 0 1157.257 4465.0778 N93n S97s S98s TMT10 91 (K) GQnGDDssAGGDFPPPAEVEPTPEAELLAQPCHDSEASK (L) GQN(1.0)GDDS(0.99)S(0.99)AGGDFPPPAEVEPT(0.0)PEAELLAQPCHDS(0.0)EAS(0.0)K C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S HEXIM1 40908 2 5 1285.2 158.28 HUMAN 1 -2.2756 11.5027 KGQPISLSNEIIQTE-p P43115-2;S380-p KGQPISLSNEIIQTE 0.739412668523583 0.453068152740528 -0.0536666666666667 -0.105666666666667 2.48526996959511 4.58175812587643 -0.0536666666666667 -0.105666666666667 0.564251864781027 0.348196328463911 -0.613775110661609 -1.02663022293985 P43115 PTGER3 P43115.2.S380.p_PTGER3 P43115-2_S380s _1_1_380_380 P43115-2 P43115-2 Isoform EP3C of Prostaglandin E2 receptor EP3 subtype HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26388.26388.3 11.89 11.89 3.322 3 1 1 0 636.9894 1828.9854 S380s TMT10 374 (K) GQPISLsNEIIQTEA (-) GQPIS(0.0)LS(0.99)NEIIQT(0.0)EA s:Phosphorylated S PTGER3 43423 2 1 6396.1 11.89 HUMAN 1 -2.4853 -4.5818 KGQPRTVSPSTIRDG-p Q96JH7;S747-p KGQPRTVSPSTIRDG 0.307755514468933 0.888924914686095 0.153 -0.014 9.56422330902262 0.71842555080152 0.153 -0.014 0.110554816761414 0.847534615452272 1.90609015281278 -0.201657156681898 Q96JH7 VCPIP1 Q96JH7.S747.p_VCPIP1 Q96JH7_S747s _1_1_747_747 Q96JH7 Q96JH7 Deubiquitinating protein VCIP135 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13702.13702.3 13.51 8.75 1.623 8 1 1 0 836.7751 2428.3448 S747s TMT10 745 (R) TVsPSTIRDGPSSAPATPTK (A) T(0.0)VS(0.99)PS(0.0)T(0.0)IRDGPS(0.0)S(0.0)APAT(0.0)PT(0.0)K K:TMT10,s:Phosphorylated S VCPIP1 135687.4 12 2 725.1 236.71 HUMAN 1 9.5642 -0.7184 KGRAALRSPDSPKTP-p O00716;S163-p KGRAALRSPDSPKTP 0.492994289859056 0.106212348910441 -0.0963333333333334 -0.198 5.65509180142666 12.8667187726283 -0.0963333333333334 -0.198 0.27195110003056 0.0516806685030951 -1.22286818752455 -2.4857307346401 O00716 E2F3 O00716.S163.p_E2F3 O00716_S163s _1_1_163_163 O00716 O00716|O00716-2|A0A087X0B6 Transcription factor E2F3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7509.7509.3 11.05 11.05 2.125 2 1 1 0 527.2928 1499.8946 S163s TMT10 159 (R) AALRsPDSPK (T) AALRS(0.99)PDS(0.0)PK K:TMT10,s:Phosphorylated S E2F3 49560.1 8 1 3334.1 53.58 HUMAN 1 -5.6551 -12.8667 KGRERLNSSENGEDR-p Q7L4I2;S104-p KGRERLNSSENGEDR 0.613684171295367 0.554331704682542 -0.12 -0.069 3.93336644720237 3.45219838065934 -0.12 -0.069 0.404262404950772 0.45162727465022 -0.904370948779913 -0.810729101156413 Q7L4I2 RSRC2 Q7L4I2.S104.p_RSRC2 Q7L4I2_S104s _1_1_104_104 Q7L4I2 Q7L4I2|Q7L4I2-2 Arginine/serine-rich coiled-coil protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4514.4514.3 14.4 14.4 1.134 2 1 1 0 641.9825 1843.9663 S104s TMT10 102 (R) LNsSENGEDRHK (R) LNS(0.99)S(0.0)ENGEDRHK K:TMT10,s:Phosphorylated S RSRC2 50615.9 9 4 1070.1 180.75 HUMAN 1 -3.9334 -3.4522 KGRGLVVSPKDYSTK-p P83876;S132-p KGRGLVVSPKDYSTK 0.0871905809717546 0.0329413102447167 -0.348666666666667 -0.355 22.5680409797655 19.9906770244654 -0.348666666666667 -0.355 0.00553599771284688 0.0100214900024702 -4.45304869521878 -3.87332756795753 P83876 TXNL4A P83876.S132.p_TXNL4A P83876_S132s _1_1_132_132 P83876 P83876|K7ESL1 Thioredoxin-like protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17061.17061.3 12.06 9.07 3.118 4 1 1 0 687.7252 1981.1937 S132s TMT10 128 (R) GLVVsPKDYSTK (Y) GLVVS(0.99)PKDY(0.0)S(0.0)T(0.0)K K:TMT10,s:Phosphorylated S TXNL4A 16900.2 4 1 5295.1 20.92 HUMAN 1 -22.568 -19.9907 KGRKDDDSDDESQSS-p O94874;S458-p KGRKDDDSDDESQSS 0.136413741200533 0.24780114457419 0.39 0.162333333333333 17.7420014405886 7.98324514690945 0.39 0.162333333333333 0.0168189878152954 0.159101943695099 3.41023833060384 1.63173788949505 O94874 UFL1 O94874.S458.p_UFL1 O94874_S458s _1_1_458_458 O94874 O94874|O94874-2|O94874-3 E3 UFM1-protein ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4152.4152.3 21.44 19.49 2.211 5 1 1 0 720.9711 2080.9307 S458s TMT10 455 (K) DDDsDDESQSSHTGK (K) DDDS(0.99)DDES(0.0)QS(0.0)S(0.0)HT(0.0)GK K:TMT10,s:Phosphorylated S UFL1 90050.1 17 2 1777.1 115.48 HUMAN 1 17.742 7.9832 KGRLKSISREPSPAL-p Q9BRZ2;S471-p KGRLKSISREPSPAL 0.212702492337707 0.89086011292226 0.249 -0.015 12.9721867957976 0.704480257146612 0.249 -0.015 0.0504407250263228 0.850260442199818 2.50605633826181 -0.197995262291035 Q9BRZ2 TRIM56 Q9BRZ2.S471.p_TRIM56 Q9BRZ2_S469sS471sS475s_3_3_469_475 Q9BRZ2 Q9BRZ2 E3 ubiquitin-protein ligase TRIM56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32696.32696.5 13.96 13.56 13.058 7 3 3 0 889.0454 4201.2996 S469s S471s S475s TMT10 467 (R) LKsIsREPsPALGPNLDGSGLLPRPIFYCSFPTR (M) LKS(0.99)IS(0.99)REPS(0.99)PALGPNLDGS(0.0)GLLPRPIFY(0.0)CS(0.0)FPT(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TRIM56 83197.9 2 7 1098.1 178.07 HUMAN 1 12.9722 -0.7045 KGRRIAFSSTSLLKM-p Q9Y305-4;S253-p KGRRIAFSSTSLLKM 0.629008964028517 0.100380202672384 0.0756666666666667 0.188666666666667 3.74070994734845 13.192214087967 0.0756666666666667 0.188666666666667 0.422599525674987 0.0479488936815358 0.867229829935963 2.5443405217034 Q9Y305 ACOT9 Q9Y305.4.S253.p_ACOT9 Q9Y305-4_S253s _1_1_253_253 Q9Y305-4 Q9Y305-4|Q9Y305-2|Q9Y305-3 Isoform 4 of Acyl-coenzyme A thioesterase 9, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27693.27693.2 11.59 4.85 1.144 4 1 1 0 802.9583 1524.9402 S253s TMT10 250 (R) IAFsSTSLLK (M) IAFS(0.99)S(0.0)T(0.0)S(0.0)LLK K:TMT10,s:Phosphorylated S ACOT9 51306.3 2 2 5030.1 23.74 HUMAN 1 3.7407 13.1922 KGRSGTPSPKRTSVG-p Q9BXM9;S347-p KGRSGTPSPKRTSVG 0.0796409010099057 0.0519634226877337 0.540333333333333 -0.38 23.4641431375053 17.1394339144785 0.540333333333333 -0.38 0.00450386833791084 0.0193222015778809 4.66501571995132 -3.2876172861798 Q9BXM9 FSD1L Q9BXM9.S347.p_FSD1L Q9BXM9_S347s _1_1_347_347 Q9BXM9 Q9BXM9|F8W946|Q9BXM9-2|Q8N450 FSD1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3855.3855.2 7.34 7.34 7.344 3 1 1 0 684.3756 1287.7785 S347s TMT10 343 (R) SGTPsPKR (T) S(0.0)GT(0.0)PS(0.99)PKR K:TMT10,s:Phosphorylated S FSD1L 60261.8 2 2 4858.1 25.8 HUMAN 1 23.4641 -17.1394 KGRSSAVSPRNCPAG-p Q9Y6J0;S567-p KGRSSAVSPRNCPAG 0.139286671509888 0.0490622492889973 0.295333333333333 0.397 17.5254496868376 17.5106843034647 0.295333333333333 0.397 0.0176788915355185 0.017739099497391 3.36685410052426 3.36124731686966 Q9Y6J0 CABIN1 Q9Y6J0.S567.p_CABIN1 Q9Y6J0_S567s _1_1_567_567 Q9Y6J0 Q9Y6J0|A0A087WWW8|Q9Y6J0-2 Calcineurin-binding protein cabin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4346.4346.2 9.19 1.74 2.565 3 1 1 0 506.7557 932.5363 S567s TMT10 563 (R) SSAVsPR (N) S(0.0)S(0.0)AVS(0.99)PR s:Phosphorylated S CABIN1 248858 2 5 763.1 229.21 HUMAN 1 17.5254 17.5107 KGRVAAQSPPSPASA-p J3KQR7;S1546-p KGRVAAQSPPSPASA 0.726047754139629 0.784028867103632 0.0616666666666667 0.0336666666666667 2.63708582298425 1.46415877375588 0.0616666666666667 0.0336666666666667 0.544868144386993 0.713812456849064 0.645684648811787 0.386529989468336 J3KQR7 NotFound J3KQR7.S1546.p_NotFound J3KQR7_S1546sS1549s_2_2_1546_1549 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33916.33916.3 16.73 13.54 2.176 3 2 2 0 772.7184 2156.2074 S1546s S1549s Hydrogen 1542 (R) VAAQsPPsPASAEALLPALPLR (N) VAAQS(0.99)PPS(0.99)PAS(0.0)AEALLPALPLR s:Phosphorylated S CEP170B 172326.6 3 40 51.1 746.11 HUMAN 1 2.6371 1.4642 KGRVASFSIPGSSSR-p Q14573;S1834-p KGRVASFSIPGSSSR 0.321253239094503 0.0263681512688514 0.180333333333333 0.305333333333333 9.23577545733029 21.4440781025577 0.180333333333333 0.305333333333333 0.11924013368521 0.00717120586003969 1.84918468459511 4.19165986068496 Q14573 ITPR3 Q14573.S1834.p_ITPR3 Q14573_S1834s _1_1_1834_1834 Q14573 Q14573 Inositol 1,4,5-trisphosphate receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19641.19641.2 10.72 6.71 1.904 5 1 1 0 752.3742 1423.7743 S1834s TMT10 1830 (R) VASFsIPGSSSR (Y) VAS(0.0)FS(0.99)IPGS(0.0)S(0.0)S(0.0)R s:Phosphorylated S ITPR3 307010.8 1 5 1377.1 148.68 HUMAN 1 9.2358 21.4441 KGRWAGVSLDQSALL-p O60503;S706-p KGRWAGVSLDQSALL 0.164527977909135 0.82536548230391 -0.296333333333333 -0.0343333333333333 15.698262087658 1.16759379852476 -0.296333333333333 -0.0343333333333333 0.0269261208853457 0.764259102803363 -3.01046549303726 -0.315373073451733 O60503 ADCY9 O60503.S706.p_ADCY9 O60503_S706s _1_1_706_706 O60503 O60503 Adenylate cyclase type 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32989.32989.3 13.76 11.87 3.661 2 1 1 0 645.6822 1855.0639 S706s TMT10 702 (R) WAGVsLDQSALLPLR (F) WAGVS(0.99)LDQS(0.0)ALLPLR s:Phosphorylated S ADCY9 152923.1 2 10 658.1 252.1 HUMAN 1 -15.6983 -1.1676 KGRYRSQSGEDESMN-p O43933;S1211-p KGRYRSQSGEDESMN 0.211309876563391 0.347309602782912 -0.193333333333333 -0.103666666666667 13.0350680361204 6.08855264601054 -0.193333333333333 -0.103666666666667 0.0497156585261045 0.246118769661136 -2.51738791955183 -1.30000962374994 O43933 PEX1 O43933.S1211.p_PEX1 O43933_S1211s _1_1_1211_1211 O43933 O43933|A0A0C4DG33|O43933-2 Peroxisome biogenesis factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12597.12597.2 16.41 13.05 2.249 3 1 1 0 1121.5276 2162.08 S1211s TMT10 1209 (R) SQsGEDESMNQPGPIK (T) S(0.0)QS(0.99)GEDES(0.0)MNQPGPIK K:TMT10,s:Phosphorylated S PEX1 143891.4 9 5 1753.1 117.58 HUMAN 1 -13.0351 -6.0886 KGSATAESPVACSNS-p G1UD79;S247-p KGSATAESPVACSNS 0.811110755845228 0.0750189868035207 0.0453333333333333 0.202 1.74693761285768 14.9285379034322 0.0453333333333333 0.202 0.668815360262527 0.0321474263230202 0.45200047864395 2.86320166263673 G1UD79 FAM122B G1UD79.S247.p_FAM122B G1UD79_S247s_1_1_247_247 G1UD79 G1UD79|Q7Z309-3|Q7Z309-2 Protein FAM122B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28473.28473.4 17.86 13.23 2.128 8 1 1 0 847.3971 3289.5791 S247s N253n M261m TMT10 241 (K) GSATAEsPVACSnSCSSFILmDDLSPK (-) GS(0.0)AT(0.0)AES(0.99)PVACS(0.0)N(1.0)S(0.0)CS(0.0)S(0.0)FILM(1.0)DDLS(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated,m:Oxidized methionine SPACIA2 29414.5 5 10 835.1 215.14 HUMAN 1 1.7469 14.9285 KGSCAGLSQEKEKCK-p O75362;S345-p KGSCAGLSQEKEKCK 0.744043857023488 0.0576994177753731 -0.049 -0.258 2.43954287083169 16.5028817106251 -0.049 -0.258 0.570224289722384 0.0223723615386887 -0.60408259856336 -3.16303170014698 O75362 ZNF217 O75362.S345.p_ZNF217 O75362_S345s _1_1_345_345 O75362 O75362 Zinc finger protein 217 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12238.12238.3 14.01 14.01 3.261 3 1 1 0 859.1074 2495.3379 S345s TMT10 332 (K) ELGETNKGSCAGLsQEK (E) ELGET(0.0)NKGS(0.0)CAGLS(0.99)QEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF217 117152.8 1 4 394.1 330.8 HUMAN 1 -2.4395 -16.5029 KGSDSSLSGNSDGGE-p Q8NEF9;S244-p KGSDSSLSGNSDGGE 0.0219445476003805 0.979041007209073 -1.127 0.01 38.3982219928788 0.132119009075005 -1.127 0.00999999999999998 0.000144603165677387 0.970036551651488 -9.4544385442327 0.0393277708609613 Q8NEF9 SRFBP1 Q8NEF9.S244.p_SRFBP1 Q8NEF9_S244sS247s_2_2_244_247 Q8NEF9 Q8NEF9 Serum response factor-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14978.14978.3 17.67 17.67 2.725 5 2 2 0 946.71 2678.1776 S244s S247s TMT10 238 (K) GSDSSLsGNsDGGEEFCEEEK (E) GS(0.0)DS(0.0)S(0.0)LS(0.99)GNS(0.99)DGGEEFCEEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SRFBP1 48747.1 1 7 1171.1 170.26 HUMAN 1 -38.3982 0.1321 KGSELKKSFDAVVFD-p Q86X27;S37-p KGSELKKSFDAVVFD 0.125338530777651 0.0216499450576695 -1.13266666666667 0.490333333333333 18.7616513531042 22.7597543867031 -1.13266666666667 0.490333333333333 0.0132994862467964 0.00529693399617293 -3.61808284851597 4.49289798734963 Q86X27 RALGPS2 Q86X27.S37.p_RALGPS2 Q86X27_S37s _1_1_37_37 Q86X27 Q86X27|Q86X27-3|Q86X27-2 Ras-specific guanine nucleotide-releasing factor RalGPS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.36585.36585.2 16.12 16.12 99 1 1 1 0 889.4811 1697.9878 S37s TMT10 37 (K) sFDAVVFDVLK (V) S(1.0)FDAVVFDVLK K:TMT10,s:Phosphorylated S RALGPS2 65508.3 4 2 614.1 261.34 HUMAN 1 -18.7617 22.7598 KGSLEKGSPEDKEAK-p P35520-2;S32-p KGSLEKGSPEDKEAK 0.318098337086169 0.0119377618622675 -0.159333333333333 -0.454666666666667 9.31445680930229 26.8681244507761 -0.159333333333333 -0.458207254388689 0.117099305427489 0.00205677864704264 -1.86281163804805 -5.52543583180036 P35520 CBS P35520.2.S32.p_CBS P35520-2_S32s _1_1_32_32 P35520-2 P35520-2 Isoform 2 of Cystathionine beta-synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8504.8504.2 14.12 6.55 4.815 2 1 1 0 957.5129 1834.0525 S32s TMT10 26 (K) GSLEKGsPEDK (E) GS(0.0)LEKGS(0.99)PEDK K:TMT10,s:Phosphorylated S CBS 62489.3 5 1 5132.1 22.56 HUMAN 1 -9.3145 -26.8681 KGSLERKSWTSSSSL-p Q8TEU7;S1432-p KGSLERKSWTSSSSL 0.0431670381948327 0.0339566328439142 -0.583333333333333 -0.401 30.2687368737732 19.8019828084523 -0.583333333333333 -0.401 0.000939996664669046 0.0104665058171049 -6.51430586179813 -3.83304054668108 Q8TEU7 RAPGEF6 Q8TEU7.S1432.p_RAPGEF6 Q8TEU7_S1432s _1_1_1432_1432 Q8TEU7 E9PCH4|Q8TEU7-4 Rap guanine nucleotide exchange factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21422.21422.3 15.33 13.52 1.124 11 1 1 0 916.4355 2667.319 S1432s TMT10 1432 (K) sWTSSSSLSDTYEPNYGTVK (Q) S(0.99)WT(0.0)S(0.0)S(0.0)S(0.0)S(0.0)LS(0.0)DT(0.0)Y(0.0)EPNY(0.0)GT(0.0)VK K:TMT10,s:Phosphorylated S RAPGEF6 180960.1 1 14 795.1 224.05 HUMAN 1 -30.2687 -19.802 KGSLYNWTPPSTPSF-p Q96MK2;T345-p KGSLYNWTPPSTPSF 0.698972630688095 0.687193374128327 0.056 0.045 2.92275396134243 2.23091441862644 0.056 0.045 0.510181379614675 0.598285611164929 0.704678607986731 0.559285675238114 Q96MK2 FAM65C Q96MK2.T345.p_FAM65C Q96MK2_T345t _1_1_345_345 Q96MK2 Q96MK2|Q96MK2-2 RIPOR family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22272.22272.3 12.86 12.86 3.205 6 1 1 0 792.7457 2296.249 T345t TMT10 338 (R) KGSLYNWtPPSTPSFR (E) KGS(0.0)LY(0.0)NWT(0.99)PPS(0.0)T(0.0)PS(0.0)FR K:TMT10,t:Phosphorylated T RIPOR3 106657.4 1 1 3747.1 43.99 HUMAN 1 2.9228 2.2309 KGSNNLKTPEGKVKT-p Q14241;T397-p KGSNNLKTPEGKVKT 0.795509174493057 0.00636297912234379 0.0383333333333333 -0.628 1.9200732777464 31.6226891964557 0.0383333333333333 -0.628 0.642676873451344 0.000688226007697845 0.491028029173839 -6.92965765578582 Q14241 TCEB3 Q14241.T397.p_TCEB3 Q14241_T397t_1_1_397_397 Q14241 Q14241|A0A024RAC6 Elongin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8379.8379.3 8.8 4.25 1.755 2 1 1 0 638.3492 1832.0845 N393n T397t TMT10 391 (K) GSnNLKtPEGK (V) GS(0.0)N(0.99)N(0.0)LKT(0.99)PEGK K:TMT10,n:Deamidated,t:Phosphorylated T ELOA 90363.7 1 5 2069.1 99.52 HUMAN 1 1.9201 -31.6227 KGSNYHLSDNDASDV-p Q96QE2;S640-p KGSNYHLSDNDASDV 0.340822094730876 0.222151082181479 0.157666666666667 0.139 8.69123704434184 8.60405774493416 0.157666666666667 0.139 0.135168749370838 0.137909513209086 1.75491543096962 1.73922744864653 Q96QE2 SLC2A13 Q96QE2.S640.p_SLC2A13 Q96QE2_S640sS645s_2_2_640_645 Q96QE2 Q96QE2 Proton myo-inositol cotransporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12184.12184.3 11.44 11.44 11.44 4 2 2 0 671.2573 1851.8194 S640s S645s TMT10 634 (K) GSNYHLsDNDAsDVE (-) GS(0.0)NY(0.0)HLS(0.99)DNDAS(0.99)DVE s:Phosphorylated S SLC2A13 71225.4 3 3 4452.1 31.19 HUMAN 1 8.6912 8.6041 KGSPTSAYPERKGSP-p Q6ZRV2;Y875-p KGSPTSAYPERKGSP 0.3631429045758 0.275161000419461 -0.124666666666667 -0.118333333333333 8.16950331565484 7.38442590654234 -0.124666666666667 -0.118333333333333 0.152422706327234 0.182623814336409 -1.66455275922312 -1.52770562796235 Q6ZRV2 FAM83H Q6ZRV2.Y875.p_FAM83H Q6ZRV2_Y875y _1_1_875_875 Q6ZRV2 Q6ZRV2 Protein FAM83H GG20160819_MSz_CCLE_T4D7_pY_Injection_01.5809.5844.2 18.18 9.5 3.618 4 1 1 0 687.3182 1293.6636 Y875y TMT10 869 (K) GSPTSAyPER (K) GS(0.0)PT(0.0)S(0.0)AY(0.99)PER y:Phosphorylated Y FAM83H 127633.5 3 1 47.1 46.82 HUMAN 1 -8.1695 -7.3844 KGSPTSAYPERRGSP-p Q6ZRV2;Y908-p KGSPTSAYPERRGSP 0.659595024833796 0.362515173614571 0.074 0.162 3.38831047214125 5.84519714381539 0.074 0.162 0.45832015148533 0.260303666633892 0.798236880874832 1.2566454705603 Q6ZRV2 FAM83H Q6ZRV2.Y908.p_FAM83H Q6ZRV2_Y908y _1_1_908_908 Q6ZRV2 Q6ZRV2 Protein FAM83H GG20160819_MSz_CCLE_T4D7_pY_Injection_02.4576.4576.3 17.09 17.09 7.23 4 1 1 0 510.582 1449.7648 Y908y TMT10 902 (K) GSPTSAyPERR (G) GS(0.0)PT(0.0)S(0.0)AY(0.99)PERR y:Phosphorylated Y FAM83H 127633.5 4 2 47.1 46.82 HUMAN 1 3.3883 5.8452 KGSSAVGSDSD____-p Q68E01;S1040-p KGSSAVGSDSD____ 0.0901040343669965 0.0954163723371658 0.343333333333333 0.215 22.2457896473011 13.4961297731449 0.343333333333333 0.215 0.00596239899844272 0.0447081832845374 4.37836256364599 2.59937125115148 Q68E01 INTS3 Q68E01.S1040.p_INTS3 Q68E01_S1040sS1042s_2_2_1040_1042 Q68E01 Q68E01|Q68E01-2|Q68E01-3|Q68E01-4 Integrator complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6387.6387.2 10.74 10.74 10.744 4 2 2 0 814.3547 1467.7691 S1040s S1042s TMT10 1033 (R) KGSSAVGsDsD (-) KGS(0.0)S(0.0)AVGS(0.99)DS(0.99)D K:TMT10,s:Phosphorylated S INTS3 119608.2 5 6 1627.1 125.71 HUMAN 1 22.2458 13.4961 KGSSERGSPIEKYMR-p Q9UHF7-2;S1079-p KGSSERGSPIEKYMR 0.252651211577592 0.443871481311598 -0.192333333333333 0.104 11.3946917187013 4.69700405838708 -0.192333333333333 0.104 0.0725321962802662 0.339077985390807 -2.22540622509725 1.04802696645289 Q9UHF7 TRPS1 Q9UHF7.2.S1079.p_TRPS1 Q9UHF7-2_S1079s _1_1_1079_1079 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5893.5893.3 10.03 5.62 3.664 3 1 1 0 562.2947 1604.9008 S1079s TMT10 1073 (K) GSSERGsPIEK (Y) GS(0.0)S(0.0)ERGS(0.99)PIEK K:TMT10,s:Phosphorylated S TRPS1 145246 6 36 14.1 1150.14 HUMAN 1 -11.3947 4.697 KGSSKQQSEEDLLLQ-p Q9UNL2-2;S11-p KGSSKQQSEEDLLLQ 0.309869250687191 0.0366954184389406 0.14 -0.383333333333333 9.51312145765965 19.3098888701557 0.14 -0.383333333333333 0.111863358531009 0.011722253607612 1.89723240076936 -3.72904859645315 Q9UNL2 SSR3 Q9UNL2.2.S11.p_SSR3 Q9UNL2-2_S11s _1_1_11_11 Q9UNL2-2 Q9UNL2-2|C9JA28 Isoform 2 of Translocon-associated protein subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26019.26019.3 16.56 16.56 12.364 2 1 1 0 672.9883 1936.9814 S11s TMT10 9 (K) QQsEEDLLLQDFSR (N) QQS(0.99)EEDLLLQDFS(0.0)R s:Phosphorylated S SSR3 22666.9 6 1 3200.1 57.73 HUMAN 1 9.5131 -19.3099 KGSSTDISEDWEKDF-p Q9NW68-7;S409-p KGSSTDISEDWEKDF 0.150283451076775 0.701177435799001 -0.572333333333333 -0.0396666666666666 16.5856593397202 2.11903314784149 -0.572333333333333 -0.0396666666666667 0.021949976824088 0.613898659716983 -3.18146646341421 -0.534940851736226 Q9NW68 BSDC1 Q9NW68.7.S409.p_BSDC1 Q9NW68-7_S409s _1_1_409_409 Q9NW68-7 Q9NW68-3|Q9NW68-7 Isoform 7 of BSD domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14665.14665.3 17.51 9.45 5.524 4 1 1 0 750.3822 2169.1642 S409s TMT10 402 (K) KGSSTDIsEDWEK (D) KGS(0.0)S(0.0)T(0.0)DIS(0.99)EDWEK K:TMT10,s:Phosphorylated S BSDC1 49387.9 1 7 1426.1 143.74 HUMAN 1 -16.5857 -2.119 KGSVPLSSSPPATHF-p P11388-2;S1418-p KGSVPLSSSPPATHF 0.522932385009279 0.37236988138142 -0.113333333333333 -0.0926666666666666 5.20764188134934 5.69126413809415 -0.113333333333333 -0.0926666666666666 0.301464246104587 0.269695429262849 -1.14197701189244 -1.22908494495087 P11388 TOP2A P11388.2.S1418.p_TOP2A P11388-2_S1418sS1419s_2_2_1418_1419 P11388-2 P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25785.25785.5 16.89 14.62 1.111 9 2 2 0 1034.1327 5006.702 S1418s S1419s TMT10 1400 (K) SVVSDLEADDVKGSVPLSssPPATHFPDETEITNPVPKK (N) S(0.0)VVS(0.0)DLEADDVKGS(0.0)VPLS(0.0)S(0.99)S(0.99)PPAT(0.0)HFPDET(0.0)EIT(0.0)NPVPKK K:TMT10,s:Phosphorylated S TOP2A 178239.3 18 22 71.2 658.36 HUMAN 1 -5.2076 -5.6913 KGTEKRESPSPAPKP-p A9Z1X7;S445-p KGTEKRESPSPAPKP 0.685023183586931 0.110696378669361 0.0573333333333333 0.196666666666667 3.08220023217186 12.6200523926074 0.0573333333333333 0.196666666666667 0.491790320673491 0.0547009363818715 0.737059207189515 2.44152944953709 A9Z1X7 NotFound A9Z1X7.S445.p_NotFound A9Z1X7_S445s _1_1_445_445 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.4009.4009.5 14.85 10.27 1.481 3 1 1 0 481.6716 2324.3653 S445s TMT10 439 (K) GTEKREsPSPAPKPR (K) GT(0.0)EKRES(0.99)PS(0.0)PAPKPR K:TMT10,s:Phosphorylated S SRRM1 103445.7 24 13 8.1 1346.57 HUMAN 1 3.0822 12.6201 KGTEWGQSSGAASPG-p P49757-7;S225-p KGTEWGQSSGAASPG 0.431524603990949 0.104275785358256 0.246666666666667 0.178 6.72066002301289 12.9716664707482 0.246666666666667 0.178 0.212781564467907 0.0504467686548115 1.41202205925786 2.50459203202016 P49757 NUMB P49757.7.S225.p_NUMB P49757-7_S225s _1_1_225_225 P49757-7 P49757-7|P49757-8 Isoform 7 of Protein numb homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13514.13514.4 13.35 12.54 1.112 4 1 1 0 642.309 2486.2486 S225s TMT10 219 (K) GTEWGQsSGAASPGLFQAGHRR (T) GT(0.0)EWGQS(0.99)S(0.0)GAAS(0.0)PGLFQAGHRR s:Phosphorylated S NUMB 50767.3 1 13 538.3 277.23 HUMAN 1 6.7207 12.9717 KGTGASGSFKLNKKA-p P16402;S105-p KGTGASGSFKLNKKA 0.328973311069319 0.0263581786161247 -0.374333333333333 0.351333333333333 9.02540529598547 21.4493792026732 -0.374333333333333 0.351333333333333 0.125158246633938 0.00716245785838131 -1.81276082827828 4.19284790755637 P16402 HIST1H1D P16402.S105.p_HIST1H1D P16402_S105s _1_1_105_105 P16402 P16401|P16402|P10412|Q02539|P16403|P22492 Histone H1.3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8466.8466.3 11.11 11.11 2.513 3 1 1 0 450.5673 1269.7203 S105s TMT10 99 (K) GTGASGsFK (L) GT(0.0)GAS(0.0)GS(0.99)FK K:TMT10,s:Phosphorylated S HIST1H1D 22349.5 1 22 738.1 234.77 HUMAN 1 -9.0254 21.4494 KGTLGRHSPYRTLEP-p Q9NYB9-2;S190-p KGTLGRHSPYRTLEP 0.623263627016129 0.0693840363941115 -0.0776666666666667 -0.284666666666667 3.81509843316675 15.4073741997642 -0.0776666666666667 -0.284666666666667 0.415422635550281 0.028791386528182 -0.881616307993402 -2.95321783579041 Q9NYB9 ABI2 Q9NYB9.2.S190.p_ABI2 Q9NYB9-2_S190s _1_1_190_190 Q9NYB9-2 Q9NYB9|F8WAL6|Q9NYB9-4|A0A0C4DG21|E7EW77|Q9NYB9-2|Q9NYB9-3|B7Z836 Isoform 2 of Abl interactor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.3642.3642.4 13.97 13.97 3.605 3 1 1 0 363.9385 1372.7647 S190s TMT10 184 (K) GTLGRHsPYR (T) GT(0.0)LGRHS(0.99)PY(0.0)R s:Phosphorylated S ABI2 52501.9 5 4 1041.1 185.01 HUMAN 1 -3.8151 -15.4074 KGTMDDISQEEGSSQ-p Q14683;S951-p KGTMDDISQEEGSSQ 0.470077219308049 0.112380248467204 0.195666666666667 0.544 6.05364476874224 12.523652302321 0.195666666666667 0.544 0.248105003732661 0.0559287057965725 1.29411433231786 2.42430310797767 Q14683 SMC1A Q14683.S951.p_SMC1A Q14683_S951s _1_1_951_951 Q14683 Q14683|G8JLG1 Structural maintenance of chromosomes protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10180.10180.3 11.38 11.38 1.198 7 1 1 0 932.3902 2715.1849 S951s TMT10 945 (K) GTMDDIsQEEGSSQGEDSVSGSQR (I) GT(0.0)MDDIS(0.99)QEEGS(0.0)S(0.0)QGEDS(0.0)VS(0.0)GS(0.0)QR s:Phosphorylated S SMC1A 143857.9 1 2 2304.1 88.94 HUMAN 1 6.0536 12.5237 KGTNSSDSEELSAGE-p Q4LE39;S1155-p KGTNSSDSEELSAGE 0.209651843343969 0.808416707294592 0.203666666666667 -0.0246666666666667 13.0970949520906 1.29357374087937 0.203666666666667 -0.0246666666666666 0.0490106547897144 0.74240797064697 2.52857772414284 -0.345943818470396 Q4LE39 ARID4B Q4LE39.S1155.p_ARID4B Q4LE39_S1155s _1_1_1155_1155 Q4LE39 Q4LE39|Q4LE39-2 AT-rich interactive domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12970.12970.3 13.94 13.94 1.201 7 1 1 0 922.1329 2684.4193 S1155s TMT10 1147 (K) GKGTNSSDsEELSAGESITK (S) GKGT(0.0)NS(0.0)S(0.0)DS(0.99)EELS(0.0)AGES(0.0)IT(0.0)K K:TMT10,s:Phosphorylated S ARID4B 148890.9 1 16 191.1 463.89 HUMAN 1 13.0971 -1.2936 KGTPRNGSPPPGAPS-p Q9Y3Q8;S62-p KGTPRNGSPPPGAPS 0.703545989174049 0.0912971014250874 0.0556666666666667 0.231 2.87102981530037 13.7502574622618 0.0556666666666667 0.231 0.516293929210596 0.0421671504787806 0.694093013843867 2.64562591523788 Q9Y3Q8 TSC22D4 Q9Y3Q8.S62.p_TSC22D4 Q9Y3Q8_S62s _1_1_62_62 Q9Y3Q8 Q9Y3Q8 TSC22 domain family protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4854.4854.3 15.65 15.65 15.646 3 1 1 0 478.231 1352.712 S62s TMT10 60 (R) NGsPPPGAPSSR (F) NGS(0.99)PPPGAPS(0.0)S(0.0)R s:Phosphorylated S TSC22D4 41082.3 8 2 648.1 254.5 HUMAN 1 2.871 13.7503 KGVDFESSEDDDDDP-p P49959;S689-p KGVDFESSEDDDDDP 0.377818064461619 0.147228921248642 0.12 0.149333333333333 7.81408899035073 10.9513987571764 0.12 0.149333333333333 0.165421174861233 0.0803267367584874 1.60289259197974 2.14663410826105 P49959 MRE11A P49959.S689.p_MRE11A P49959_S688sS689s_2_2_688_689 P49959 P49959-3|F8W7U8|P49959-2 Double-strand break repair protein MRE11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28285.28285.2 17.98 17.98 8.014 5 2 2 0 1434.0529 2707.1515 S688s S689s TMT10 683 (K) GVDFEssEDDDDDPFMNTSSLR (R) GVDFES(0.99)S(0.99)EDDDDDPFMNT(0.0)S(0.0)S(0.0)LR s:Phosphorylated S MRE11 80934.2 27 11 588.1 264.48 HUMAN 1 7.8141 10.9514 KGVEELESLCEVYRQ-p P49454;S1650-p KGVEELESLCEVYRQ 0.614665945659428 0.441203532322082 -0.068 -0.118666666666667 3.92273326142758 4.73171247294293 -0.068 -0.118666666666667 0.40525340622601 0.336378905162119 -0.902330914537694 -1.05445194494949 P49454 CENPF P49454.S1650.p_CENPF P49454_S1650s _1_1_1650_1650 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24028.24028.3 16.26 16.26 8.132 2 1 1 0 631.2964 1811.9047 S1650s TMT10 1644 (K) GVEELEsLCEVYR (Q) GVEELES(0.99)LCEVY(0.0)R C:Carbamidomethylation,s:Phosphorylated S CENPF 371067.2 2 17 47.1 771.73 HUMAN 1 -3.9227 -4.7317 KGVEPSPSPIKPGDI-p Q92890-1;S283-p KGVEPSPSPIKPGDI 0.102101742086315 0.00123467326444358 -0.315333333333333 -1.15033333333333 20.9690644311257 47.7480486393888 -0.315333333333333 -1.15033333333333 0.00800006576017525 1.67955850344363e-05 -4.09007787006693 -14.2324484272888 Q92890 UFD1L Q92890.1.S283.p_UFD1L Q92890-1_S283s _1_1_283_283 Q92890-1 Q92890-1|Q92890-3 Isoform Long of Ubiquitin recognition factor in ER-associated degradation protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13422.13422.5 18.54 18.54 5.142 2 1 1 0 601.3663 2922.8365 S283s TMT10 275 (K) KKGVEPSPsPIKPGDIK (R) KKGVEPS(0.0)PS(0.99)PIKPGDIK K:TMT10,s:Phosphorylated S UFD1 39066.9 16 5 833.1 215.39 HUMAN 1 -20.9691 -47.748 KGVPAGNSDTEGGQP-p Q9UKV3;S838-p KGVPAGNSDTEGGQP 0.206343092406464 0.104346285946509 0.211666666666667 0.181666666666667 13.2544265711142 12.9675367871786 0.211666666666667 0.181666666666667 0.0472669242550592 0.0504947610381625 2.55701591139319 2.5038492040546 Q9UKV3 ACIN1 Q9UKV3.S838.p_ACIN1 Q9UKV3_S838s _1_1_838_838 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4|Q9UKV3-2|Q9UKV3-3|G3V3B0 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6297.6297.2 16.33 13.49 1.424 2 1 1 0 904.4116 1727.851 S838s TMT10 832 (K) GVPAGNsDTEGGQPGR (K) GVPAGNS(0.99)DT(0.0)EGGQPGR s:Phosphorylated S ACIN1 152258.2 9 30 32.2 899.18 HUMAN 1 13.2544 12.9675 KGVQVPASPDTVPQP-p Q92613;S85-p KGVQVPASPDTVPQP 0.297311465557868 0.808349563346216 0.168333333333333 -0.03 9.92125655919056 1.29432557577644 0.168333333333333 -0.03 0.101829671812867 0.742279458788724 1.96803321592943 -0.346124693911719 Q92613 JADE3 Q92613.S85.p_JADE3 Q92613_S85s _1_1_85_85 Q92613 Q92613 Protein Jade-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18218.18218.2 15.84 15.84 2.793 3 1 1 0 1029.0352 1977.0967 S85s TMT10 79 (K) GVQVPAsPDTVPQPSLR (I) GVQVPAS(0.99)PDT(0.0)VPQPS(0.0)LR s:Phosphorylated S JADE3 95461.1 2 1 1439.1 142.43 HUMAN 1 9.9213 -1.2943 KGVQVPVSPGTIPQP-p Q6IE81;S89-p KGVQVPVSPGTIPQP 0.561383737409577 0.721199680698049 0.104333333333333 -0.041 4.61479136700148 1.95689266123261 0.104333333333333 -0.041 0.345557929617303 0.637251305530025 1.03296863665436 -0.499176806233138 Q6IE81 JADE1 Q6IE81.S89.p_JADE1 Q6IE81_S89s _1_1_89_89 Q6IE81 Q6IE81|Q6IE81-2|Q6IE81-3 Protein Jade-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22087.22087.3 12.18 11.71 3.952 2 1 1 0 671.0362 1931.1276 S89s TMT10 83 (K) GVQVPVsPGTIPQPVAR (V) GVQVPVS(0.99)PGT(0.0)IPQPVAR s:Phosphorylated S JADE1 97129.2 2 1 1555.1 131.82 HUMAN 1 4.6148 -1.9569 KGVSQTGTPVCEEDG-p Q12888-2;T1377-p KGVSQTGTPVCEEDG 0.163338476514576 0.343881984312331 0.245666666666667 0.0966666666666667 15.765106583542 6.14136121824657 0.245666666666667 0.0966666666666667 0.0265148602005727 0.243144179775882 3.02321709644485 1.3093886477763 Q12888 TP53BP1 Q12888.2.T1377.p_TP53BP1 Q12888-2_T1377t _1_1_1377_1377 Q12888-2 Q12888-2|Q12888-3 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15464.15464.3 18.48 18.48 1.271 3 1 1 0 809.7078 2347.1397 T1377t TMT10 1371 (K) GVSQTGtPVCEEDGDAGLGIR (Q) GVS(0.0)QT(0.0)GT(0.99)PVCEEDGDAGLGIR C:Carbamidomethylation,t:Phosphorylated T TP53BP1 216167.2 2 59 3.1 2297.07 HUMAN 1 15.7651 6.1414 KGVTVPHSPPQPKTN-p O15018;S1850-p KGVTVPHSPPQPKTN 0.837853261844575 0.00952411333032317 -0.0326666666666667 -0.421666666666667 1.48716694049064 28.5143818574332 -0.0326666666666667 -0.421666666666667 0.710040802138892 0.00140786759953839 -0.39197834490869 -5.98367825541637 O15018 PDZD2 O15018.S1850.p_PDZD2 O15018_S1850s _1_1_1850_1850 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11949.12155.3 17.32 17.32 3.656 2 1 1 0 594.6614 1702.0052 S1850s TMT10 1844 (K) GVTVPHsPPQPK (T) GVT(0.0)VPHS(0.99)PPQPK K:TMT10,s:Phosphorylated S PDZD2 304146 7 26 85.1 628.64 HUMAN 1 -1.4872 -28.5144 KGWLRDPSASPGDAG-p P18206-2;S288-p KGWLRDPSASPGDAG 0.668520665294903 0.0368200010402739 0.0596666666666667 0.297333333333333 3.27095084412958 19.2882238890409 0.0596666666666667 0.297333333333333 0.470874221931043 0.0117808767124145 0.774928104578752 3.72450526574884 P18206 VCL P18206.2.S288.p_VCL P18206-2_S288s _1_1_288_288 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15373.15373.2 7.66 5.65 1.108 2 1 1 0 1146.5475 2212.1308 S288s TMT10 282 (K) GWLRDPsASPGDAGEQAIR (Q) GWLRDPS(0.99)AS(0.0)PGDAGEQAIR s:Phosphorylated S VCL 117290.9 4 3 319.1 365.38 HUMAN 1 3.271 19.2882 KGYCPAKSPKDLAVK-p P51825-2;S252-p KGYCPAKSPKDLAVK 0.301590454921122 0.0244219082797508 0.18 -0.349333333333333 9.7693049175455 21.9561930079126 0.18 -0.349333333333333 0.105455566309549 0.00637353975705678 1.94165727780365 -4.30737572662496 P51825 AFF1 P51825.2.S252.p_AFF1 P51825-2_S252s _1_1_252_252 P51825-2 P51825-2|P51825-3|F5GXF9 Isoform 2 of AF4/FMR2 family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8203.8203.2 13.87 7.32 10.603 2 1 1 0 887.9812 1694.9867 S252s TMT10 246 (K) GYCPAKsPK (D) GY(0.0)CPAKS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AFF1 133180 8 2 1199.1 167.15 HUMAN 1 9.7693 -21.9562 KGYPHLCSICDLPVH-p A8MXP9;S294-p KGYPHLCSICDLPVH 0.367884658206245 0.0488060681318596 -0.123333333333333 -0.242666666666667 8.05499877585325 17.5424277809361 -0.123333333333333 -0.242666666666667 0.156494876033724 0.0176099134671947 -1.64470011482123 -3.36757717181529 A8MXP9 NotFound A8MXP9.S294.p_NotFound A8MXP9_S294s _1_1_294_294 A8MXP9 A8MXP9|P43243|D6REM6 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18378.18378.4 18.87 18.87 9.039 3 1 1 0 634.5631 2455.2626 S294s TMT10 288 (K) GYPHLCsICDLPVHSNK (E) GY(0.0)PHLCS(0.99)ICDLPVHS(0.0)NK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MATR3 100478.9 1 20 92.1 615.57 HUMAN 1 -8.055 -17.5424 KGYVVRISGGNDKQG-p P62753;S53-p KGYVVRISGGNDKQG 0.259256728457964 0.329747487375062 -0.398 0.101333333333333 11.1348333530586 6.38021139835488 -0.398 0.101333333333333 0.0770045991899529 0.230132979453152 -2.17974799971271 1.3516830022293 P62753 RPS6 P62753.S53.p_RPS6 P62753_S53s _1_1_53_53 P62753 P62753|A2A3R5 40S ribosomal protein S6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13281.13281.3 9.75 9.75 6.997 2 1 1 0 601.6567 1722.9903 S53s TMT10 47 (K) GYVVRIsGGNDK (Q) GY(0.0)VVRIS(0.99)GGNDK K:TMT10,s:Phosphorylated S RPS6 28851.3 1 1 2203.1 93.5 HUMAN 1 -11.1348 6.3802 KHALLDVTPSAIERL-p O95049-3;T698-p KHALLDVTPSAIERL 0.202398598025248 0.0386105614447203 -0.211 -0.262666666666667 13.4598517203379 18.9841216542378 -0.211 -0.262666666666667 0.045083209688297 0.0126353662393574 -2.59426933712255 -3.66103807083583 O95049 TJP3 O95049.3.T698.p_TJP3 O95049-3_T698t _1_1_698_698 O95049-3 O95049-3|O95049-4 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19101.19101.3 8.84 8.84 3.003 2 1 1 0 577.6399 1650.9376 T698t TMT10 692 (K) HALLDVtPSAIER (L) HALLDVT(0.99)PS(0.0)AIER t:Phosphorylated T TJP3 103593.6 1 17 125.1 544.41 HUMAN 1 -13.4599 -18.9841 KHARERVTPPEGYEV-p O00151;T316-p KHARERVTPPEGYEV 0.43606840550564 0.979944150390792 0.122666666666667 -0.00266666666666663 6.63480487708133 0.125634374278534 0.122666666666667 -0.00266666666666662 0.217029871010445 0.971486036173703 1.39692377431158 -0.0374242074381387 O00151 PDLIM1 O00151.T316.p_PDLIM1 O00151_T316t _1_1_316_316 O00151 O00151 PDZ and LIM domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24463.24463.3 16.33 16.33 4.158 3 1 1 0 829.1095 2405.3481 T316t TMT10 313 (R) ERVtPPEGYEVVTVFPK (-) ERVT(0.99)PPEGY(0.0)EVVT(0.0)VFPK K:TMT10,t:Phosphorylated T PDLIM1 36527.5 2 8 1380.1 148.35 HUMAN 1 6.6348 -0.1256 KHARNNVSLLQSCID-p Q9Y5X3;S392-p KHARNNVSLLQSCID 0.552304299878032 0.509444253575256 0.084 0.0636666666666667 4.75838052120845 3.92673881465309 0.084 0.0636666666666667 0.334319684184659 0.404879808170405 1.05958812454022 0.902948636295939 Q9Y5X3 SNX5 Q9Y5X3.S392.p_SNX5 Q9Y5X3_S392s _1_1_392_392 Q9Y5X3 Q9Y5X3 Sorting nexin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32715.32715.3 18.06 15.76 4.106 2 1 1 0 730.3872 2109.1778 S392s TMT10 389 (R) NNVsLLQSCIDLFK (N) NNVS(0.99)LLQS(0.0)CIDLFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SNX5 47100.9 1 4 2397.1 85.28 HUMAN 1 4.7584 3.9267 KHATGKKSPAKSPNP-p O76021;S392-p KHATGKKSPAKSPNP 0.0866557243462627 0.00111305191089678 1.49066666666667 -1.43966666666667 22.6887589435491 49.558223768855 1.49066666666667 -1.43966666666667 0.00538423622519162 1.10707647719144e-05 4.48123327735063 -15.3949578019949 O76021 RSL1D1 O76021.S392.p_RSL1D1 O76021_S392s _1_1_392_392 O76021 O76021|O76021-2 Ribosomal L1 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5148.5148.3 11.5 4.99 7.621 4 1 1 0 592.9863 1696.9746 S392s TMT10 392 (K) sPAKSPNPSTPR (G) S(0.99)PAKS(0.0)PNPS(0.0)T(0.0)PR K:TMT10,s:Phosphorylated S RSL1D1 55199.7 5 4 643.1 254.92 HUMAN 1 22.6888 -49.5582 KHAWRNASRCVGRIQ-p P29475-5;S418-p KHAWRNASRCVGRIQ 0.168689953351787 0.0147793875061614 0.472666666666667 0.365 15.4264407492772 25.3475152732442 0.472666666666667 0.365 0.028665262626999 0.00291909663757302 2.95881971820509 5.12581970332705 P29475 NOS1 P29475.5.S418.p_NOS1 P29475-5_T404tS418s_2_2_404_418 P29475-5 P29475-5|C9J5P6|P29475-2|P29475-3 Isoform 5 of Nitric oxide synthase, brain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3816.3816.4 8.08 2.61 2.112 3 2 2 0 595.2794 2217.1726 T404t N416n S418s Hydrogen 403 (K) DtELIYGAKHAWRnAsR (C) DT(0.99)ELIY(0.0)GAKHAWRN(1.0)AS(0.99)R K:TMT10-Lys-Only,t:Phosphorylated T,n:Deamidated,s:Phosphorylated S NOS1 166145.8 1 2 6013.1 14.65 HUMAN 1 15.4264 25.3475 KHAYKDDSPRRRSTS-p Q02040;S633-p KHAYKDDSPRRRSTS 0.916963697628859 0.159622046268465 -0.0156666666666667 0.31 0.733866942445129 10.4798515017406 -0.0156666666666667 0.31 0.844526546888599 0.0895395381269563 -0.205721520003899 2.06433417899735 Q02040 AKAP17A Q02040.S633.p_AKAP17A Q02040_S633s _1_1_633_633 Q02040 Q02040 A-kinase anchor protein 17A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3557.3557.2 13.42 8.11 7.206 2 1 1 0 813.905 1546.8378 S633s TMT10 627 (K) HAYKDDsPR (R) HAY(0.0)KDDS(0.99)PR K:TMT10,s:Phosphorylated S AKAP17A 81361.6 7 7 1803.1 114.1 HUMAN 1 -0.7339 10.4799 KHDDGTQSDSENAGA-p Q5SW79;S379-p KHDDGTQSDSENAGA 0.081833793760253 0.220570293198833 0.342666666666667 0.154333333333333 23.23176584539 8.64264813301204 0.342666666666667 0.154333333333333 0.00475141993486139 0.136689510009731 4.60943143643169 1.74590309605181 Q5SW79 CEP170 Q5SW79.S379.p_CEP170 Q5SW79_S379s _1_1_379_379 Q5SW79 Q5SW79|Q5SW79-3|Q5SW79-2 Centrosomal protein of 170 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.2868.2868.5 16.64 16.64 1.492 3 1 1 0 538.8553 2610.2769 S379s TMT10 370 (K) GNKHDDGTQsDSENAGAHRR (C) GNKHDDGT(0.0)QS(0.99)DS(0.0)ENAGAHRR K:TMT10,s:Phosphorylated S CEP170 175689.3 2 8 128.1 537.52 HUMAN 1 23.2318 8.6426 KHDYDDSSEEQSAED-p A0A0A0MR66;S126-p KHDYDDSSEEQSAED 0.363292279428815 0.00827722160832736 0.127666666666667 0.5505 8.16581894069569 29.6110738494776 0.127666666666667 0.5505 0.152552070319834 0.00109368590480001 1.66391412434654 6.30483578501496 A0A0A0MR66 RBM10 A0A0A0MR66.S126.p_RBM10 A0A0A0MR66_S125sS126s_2_2_125_126 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8988.8988.3 18.58 18.58 1.173 11 2 2 0 1396.208 4026.6707 S125s S126s Hydrogen 112 (R) EYGSQEGKHDYDDssEEQSAEDSYEASPGSETQR (R) EY(0.0)GS(0.0)QEGKHDY(0.0)DDS(0.99)S(0.99)EEQS(0.0)AEDS(0.0)Y(0.0)EAS(0.0)PGS(0.0)ET(0.0)QR K:TMT10-Lys-Only,s:Phosphorylated S RBM10 110706.4 8 18 270.1 394.36 HUMAN 2 8.1658 29.6111 KHEDGTQSDSEDPLA-p J3KQR7;S361-p KHEDGTQSDSEDPLA 0.662515509657473 0.229544402508267 0.0593333333333333 0.158666666666667 3.34781385423264 8.42015182030565 0.0593333333333333 0.158666666666667 0.46261383273198 0.143874828173333 0.790213635951888 1.70740765149583 J3KQR7 NotFound J3KQR7.S361.p_NotFound J3KQR7_S361s _1_1_361_361 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6994.6994.5 19.12 19.12 1.146 3 1 1 0 544.4721 2638.3676 S361s TMT10 352 (K) GHKHEDGTQsDSEDPLAK (A) GHKHEDGT(0.0)QS(0.99)DS(0.0)EDPLAK K:TMT10,s:Phosphorylated S CEP170B 172326.6 5 2 51.1 746.11 HUMAN 1 3.3478 8.4202 KHEDNRRSWASPVYT-p Q8WWI1-3;S342-p KHEDNRRSWASPVYT 0.857486466676903 0.37033568385047 0.0326666666666667 0.129333333333333 1.30192025855785 5.7226531706967 0.0326666666666667 0.129333333333333 0.740982539077082 0.2677532080209 0.347986614037033 1.23471362831673 Q8WWI1 LMO7 Q8WWI1.3.S342.p_LMO7 Q8WWI1-3_S342s _1_1_342_342 Q8WWI1-3 Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22260.22260.3 20.4 20.4 2.784 6 1 1 0 694.984 2002.9708 S342s TMT10 342 (R) sWASPVYTEADGTFSR (L) S(0.99)WAS(0.0)PVY(0.0)T(0.0)EADGT(0.0)FS(0.0)R s:Phosphorylated S LMO7 154694.3 5 6 61.1 704.74 HUMAN 1 1.3019 5.7227 KHEEEEWTDDDLVES-p D6RHI7;T241-p KHEEEEWTDDDLVES 0.799050924192311 0.943562047444073 -0.0393333333333334 0.00766666666666667 1.87713578977936 0.362300179652184 -0.0393333333333334 0.00766666666666667 0.649062354742781 0.919962197657819 -0.481417625552377 0.105249101305408 D6RHI7 NotFound D6RHI7.T241.p_NotFound D6RHI7_T241t _1_1_241_241 D6RHI7 P51946|D6RHI7 Cyclin-H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19447.19447.4 18.09 11.85 4.008 3 1 1 0 739.8676 2876.4769 T241t TMT10 232 (K) KSKHEEEEWtDDDLVESL (-) KS(0.0)KHEEEEWT(0.99)DDDLVES(0.0)L K:TMT10,t:Phosphorylated T CCNH 29154.1 6 2 2849.1 68.11 HUMAN 1 -1.8771 0.3623 KHEPHQDSGEEAEGC-p Q96JQ2;S635-p KHEPHQDSGEEAEGC 0.134796267289591 0.00529900879737328 -0.487 0.71 17.8495319863343 33.0496998716892 -0.487 0.71 0.0164076657945399 0.000495484431112511 -3.43187727472247 7.40307665334589 Q96JQ2 CLMN Q96JQ2.S635.p_CLMN Q96JQ2_S635s _1_1_635_635 Q96JQ2 Q96JQ2 Calmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10023.10023.5 22.85 22.85 5.338 3 1 1 0 775.5616 3793.7888 S635s TMT10 626 (K) MDKHEPHQDsGEEAEGCPSAPEETPVDK (K) MDKHEPHQDS(0.99)GEEAEGCPS(0.0)APEET(0.0)PVDK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CLMN 112105.2 2 11 726.1 236.61 HUMAN 1 -17.8495 33.0497 KHFEEHNSMNELKQQ-p Q9BXS6;S215-p KHFEEHNSMNELKQQ 0.32559443680032 0.00518016221808102 0.206666666666667 -1.30233333333333 9.12713852883993 33.2456228049621 0.206666666666667 -1.30233333333333 0.122260494244594 0.000473628382085147 1.83037351741368 -7.47014628293038 Q9BXS6 NUSAP1 Q9BXS6.S215.p_NUSAP1 Q9BXS6_S215s_1_1_215_215 Q9BXS6 Q9BXS6|Q9BXS6-5|Q9BXS6-6 Nucleolar and spindle-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21235.21235.4 8.84 3.4 99 1 1 1 0 874.4625 3395.9028 N214n S215s M216m N217n N225n Hydrogen 207 (K) KKHFEEHnsmnELKQQPInK (G) KKHFEEHN(1.0)S(1.0)M(1.0)N(1.0)ELKQQPIN(1.0)K K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S,m:Oxidized methionine NUSAP1 49622.1 2 4 1571.1 130.66 HUMAN 1 9.1271 -33.2456 KHFNDPGSPCFNRLF-p Q9UBS8;S451-p KHFNDPGSPCFNRLF 0.625622397019659 0.253886649587886 0.0833333333333333 0.143666666666667 3.78380682726942 7.84169981233648 0.0833333333333333 0.143666666666667 0.418426630629868 0.164372824821622 0.875571746475526 1.60718840864673 Q9UBS8 RNF14 Q9UBS8.S451.p_RNF14 Q9UBS8_S451s _1_1_451_451 Q9UBS8 Q9UBS8|Q9UBS8-2 E3 ubiquitin-protein ligase RNF14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9428.9428.3 14.49 14.49 99 1 1 1 0 586.2546 1676.7801 S451s TMT10 445 (K) HFNDPGsPCFNR (L) HFNDPGS(1.0)PCFNR C:Carbamidomethylation,s:Phosphorylated S RNF14 55662.2 2 4 2286.1 89.63 HUMAN 1 3.7838 7.8417 KHINSIKSVFGGLVN-p O95721;S114-p KHINSIKSVFGGLVN 0.455652494519437 0.537136636706406 -0.160333333333333 0.061 6.29743865911646 3.63162713520701 -0.160333333333333 0.061 0.234561178017521 0.433348488875542 -1.33738163867333 0.845891727561981 O95721 SNAP29 O95721.S114.p_SNAP29 O95721_S114s _1_1_114_114 O95721 O95721 Synaptosomal-associated protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.34924.34924.3 14.88 14.88 11.801 2 1 1 0 590.3211 1688.9776 S114s TMT10 114 (K) sVFGGLVNYFK (S) S(0.99)VFGGLVNY(0.0)FK K:TMT10,s:Phosphorylated S SNAP29 28969.8 1 2 3308.1 54.3 HUMAN 1 -6.2974 3.6316 KHKKRPESPPSILTP-p P55198;S258-p KHKKRPESPPSILTP 0.275174374208549 0.542950045023771 0.207666666666667 0.0603333333333333 10.6082572841262 3.56811716244394 0.207666666666667 0.0603333333333333 0.0869309191491054 0.439732215345689 2.08761267350046 0.833488523131144 P55198 MLLT6 P55198.S258.p_MLLT6 P55198_S258s _1_1_258_258 P55198 P55198|A0A087WW39|Q6P2C6 Protein AF-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19903.19903.3 13.24 14.8 1.118 4 1 1 0 966.2224 2816.6853 S258s TMT10 254 (K) KRPEsPPSILTPPVVPTADK (V) KRPES(0.99)PPS(0.0)ILT(0.0)PPVVPT(0.0)ADK K:TMT10,s:Phosphorylated S MLLT6 113557.5 10 3 1008.1 189 HUMAN 1 10.6083 3.5681 KHKKYVISDEEEEDD-p Q8WVC0;S658-p KHKKYVISDEEEEDD 0.416481641896136 0.386057132565485 0.192666666666667 0.140333333333333 7.02123139342839 5.49534873882707 0.192666666666667 0.140333333333333 0.198553186218543 0.282140301509946 1.46472914600141 1.19384677661698 Q8WVC0 LEO1 Q8WVC0.S658.p_LEO1 Q8WVC0_S658s _1_1_658_658 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14238.14563.2 12.58 12.58 12.579 2 1 1 0 1062.4696 2043.9646 S658s TMT10 654 (K) KYVIsDEEEEDDD (-) KY(0.0)VIS(0.99)DEEEEDDD K:TMT10,s:Phosphorylated S LEO1 75516.9 5 15 514.1 286.88 HUMAN 1 7.0212 5.4953 KHLFKSPSQQEKIGD-p Q8NAP3;S1153-p KHLFKSPSQQEKIGD 0.364052441204074 0.645772194420276 -0.156 0.074 8.14273831218669 2.58932911067066 -0.156 0.074 0.153364968157043 0.550892790636417 -1.65991319293221 0.63560817110423 Q8NAP3 ZBTB38 Q8NAP3.S1153.p_ZBTB38 Q8NAP3_S1153s _1_1_1153_1153 Q8NAP3 Q8NAP3 Zinc finger and BTB domain-containing protein 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10224.10224.4 11.49 11.49 1.118 2 1 1 0 524.7938 2016.1845 S1153s TMT10 1147 (K) HLFKSPsQQEK (I) HLFKS(0.0)PS(0.99)QQEK K:TMT10,s:Phosphorylated S ZBTB38 136651.1 1 6 3033.1 62.6 HUMAN 1 -8.1427 2.5893 KHNDIVDSDSDAEDR-p P78316;S146-p KHNDIVDSDSDAEDR 0.936107507392066 0.959273532092304 0.013 -0.0053333333333333 0.559458175246916 0.260808145578739 0.013 -0.00533333333333331 0.879132190310348 0.941714343755944 0.159403144108779 -0.076566511298174 P78316 NOP14 P78316.S146.p_NOP14 P78316_S146sS148s_2_2_146_148 P78316 P78316|P78316-2|E9PFK5 Nucleolar protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21909.22528.5 19.99 19.99 1.175 5 2 2 0 836.9933 4021.0052 S146s S148s TMT10 140 (K) HNDIVDsDsDAEDRGTLSAELTAAHFGGGGGLLHK (K) HNDIVDS(0.99)DS(0.99)DAEDRGT(0.0)LS(0.0)AELT(0.0)AAHFGGGGGLLHK K:TMT10,s:Phosphorylated S NOP14 98351.3 15 4 2153.1 95.6 HUMAN 1 0.5595 -0.2608 KHNGVGGSPPKSKLL-p Q96ST3;S860-p KHNGVGGSPPKSKLL 0.68946595735862 0.0639347300309162 0.054 -0.268 3.02727366896012 15.8995293963552 0.054 -0.268 0.498049642965448 0.0257067432721628 0.72594646418329 -3.04678644185081 Q96ST3 SIN3A Q96ST3.S860.p_SIN3A Q96ST3_S860s_1_1_860_860 Q96ST3 Q96ST3 Paired amphipathic helix protein Sin3a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5186.5683.3 13.88 13.88 99 1 1 1 0 496.9253 1407.8109 N855n S860s TMT10 854 (K) HnGVGGsPPK (S) HN(1.0)GVGGS(1.0)PPK K:TMT10,n:Deamidated,s:Phosphorylated S SIN3A 145971.2 33 12 501.1 291.36 HUMAN 1 3.0273 -15.8995 KHNLDVVSPIPANKD-p Q13017;S765-p KHNLDVVSPIPANKD 0.06600969777365 0.00714231278100688 -0.527666666666667 -0.616 25.4206588054439 30.7267896657342 -0.527666666666667 -0.616 0.00287034513038716 0.000845903912014013 -5.15111177702064 -6.64546415928589 Q13017 ARHGAP5 Q13017.S765.p_ARHGAP5 Q13017_S765s _1_1_765_765 Q13017 Q13017|Q13017-2 Rho GTPase-activating protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15493.15493.3 14.54 14.54 99 1 1 1 0 648.022 1862.09 S765s TMT10 759 (K) HNLDVVsPIPANK (D) HNLDVVS(1.0)PIPANK K:TMT10,s:Phosphorylated S ARHGAP5 173940.2 1 4 639.1 255.25 HUMAN 1 -25.4207 -30.7268 KHPELNISEEGITKS-p P17480;S273-p KHPELNISEEGITKS 0.916145150674614 0.955505632112976 0.031 -0.00733333333333332 0.742350245069868 0.282165727752719 0.031 -0.00733333333333332 0.842878498882158 0.937094582644904 0.207939446944801 -0.0826510031055508 P17480 UBTF P17480.S273.p_UBTF P17480_S273s _1_1_273_273 P17480 P17480|E9PKP7|P17480-2 Nucleolar transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15751.15751.3 12.48 12.48 5.972 2 1 1 0 669.0192 1925.0744 S273s TMT10 267 (K) HPELNIsEEGITK (S) HPELNIS(0.99)EEGIT(0.0)K K:TMT10,s:Phosphorylated S UBTF 89746.7 1 3 1312.1 155.17 HUMAN 1 0.7424 -0.2822 KHREKLLSGSESSSK-p Q5BKY9;S82-p KHREKLLSGSESSSK 0.734788762117455 0.434610302812453 -0.0553333333333333 -0.0986666666666666 2.53388785251839 4.82206504405573 -0.0553333333333333 -0.0986666666666667 0.557970469718447 0.32945302200378 -0.624038446329057 -1.07113741598035 Q5BKY9 FAM133B Q5BKY9.S82.p_FAM133B Q5BKY9_S82s _1_1_82_82 Q5BKY9 Q5BKY9|Q5BKY9-2|G3XAI9 Protein FAM133B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13758.13758.2 11.91 6.07 2.209 5 1 1 0 766.902 1452.831 S82s TMT10 80 (K) LLsGSESSSK (K) LLS(0.99)GS(0.0)ES(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S FAM133B 28384.5 2 1 2537.1 79.38 HUMAN 1 -2.5339 -4.8221 KHSTENDSPTNVQQ_-p P49354;S373-p KHSTENDSPTNVQQ_ 0.929287129544062 0.322861970291187 0.0273333333333333 0.298666666666667 0.63187617081288 6.49113679075293 0.0273333333333333 0.298666666666667 0.864594329621991 0.224329465166429 0.178805770953037 1.37125946314271 P49354 FNTA P49354.S373.p_FNTA P49354_S373s _1_1_373_373 P49354 P49354|P49354-2|B3KVN2 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4169.4169.2 9.49 9.49 1.235 4 1 1 0 883.3839 1685.7928 S373s TMT10 367 (K) HSTENDsPTNVQQ (-) HS(0.0)T(0.0)ENDS(0.99)PT(0.0)NVQQ s:Phosphorylated S FNTA 44521.9 1 3 4714.1 27.54 HUMAN 1 0.6319 6.4911 KHSVTAATPPPSPTS-p Q96QU8;T204-p KHSVTAATPPPSPTS 0.534390357489892 0.0363667828484877 0.0923333333333333 0.258 5.03876197902065 19.371789758538 0.0923333333333333 0.258 0.313417904130877 0.0115563589824969 1.11115673352892 3.74204584985021 Q96QU8 XPO6 Q96QU8.T204.p_XPO6 Q96QU8_T204t _1_1_204_204 Q96QU8 Q96QU8|Q96QU8-2 Exportin-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26625.26625.4 22.8 19.11 1.761 11 1 1 0 918.7217 3591.8906 T204t TMT10 198 (K) HSVTAAtPPPSPTSGESGDLLSNLLQSPSSAK (L) HS(0.0)VT(0.0)AAT(0.99)PPPS(0.0)PT(0.0)S(0.0)GES(0.0)GDLLS(0.0)NLLQS(0.0)PS(0.0)S(0.0)AK K:TMT10,t:Phosphorylated T XPO6 130135.9 3 1 5114.1 22.8 HUMAN 1 5.0388 19.3718 KHTARELSPQHKRER-p Q86V48;S394-p KHTARELSPQHKRER 0.481005429235313 0.012047157109076 -0.096 -0.39 5.84930498476558 26.8044471244012 -0.096 -0.39 0.260057570824502 0.00208715781118996 -1.25767162551945 -5.50825927654728 Q86V48 LUZP1 Q86V48.S394.p_LUZP1 Q86V48_S394s _1_1_394_394 Q86V48 Q86V48|Q86V48-3|Q86V48-2 Leucine zipper protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4274.4274.3 7.96 2.72 99 1 1 1 0 511.6169 1452.8687 S394s TMT10 392 (R) ELsPQHKR (E) ELS(1.0)PQHKR K:TMT10,s:Phosphorylated S LUZP1 120843.3 2 4 507.1 289.34 HUMAN 1 -5.8493 -26.8044 KHVKVSNSGRFKEKK-p Q9BU68;S73-p KHVKVSNSGRFKEKK 0.482732774833985 0.0824661063726669 -0.119666666666667 -0.282333333333333 5.82305397385836 14.3564580611985 -0.119666666666667 -0.282333333333333 0.261634254003522 0.0366736548943024 -1.25297723742395 -2.75689787854329 Q9BU68 PRR15L Q9BU68.S73.p_PRR15L Q9BU68_S73s _1_1_73_73 Q9BU68 Q9BU68 Proline-rich protein 15-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8286.8286.3 7.38 7.38 1.241 2 1 1 0 478.2625 1352.8051 S73s TMT10 70 (K) VSNsGRFK (E) VS(0.0)NS(0.99)GRFK K:TMT10,s:Phosphorylated S PRR15L 11705 2 1 5523.1 18.54 HUMAN 1 -5.8231 -14.3565 KHVTSNASDSESSYR-p Q12959;S687-p KHVTSNASDSESSYR 0.51428507339171 0.852622490806139 -0.110333333333333 0.019 5.33223121436261 0.974105267861988 -0.110333333333333 0.019 0.292938786771901 0.799078550624423 -1.16460770171135 0.267344093305523 Q12959 DLG1 Q12959.S687.p_DLG1 Q12959_S684sS687s_2_2_684_687 Q12959 Q12959 Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5703.5703.2 7.5 7.5 1.111 7 2 2 0 964.8857 1768.8299 S684s S687s TMT10 681 (K) HVTsNAsDSESSYR (G) HVT(0.0)S(0.99)NAS(0.99)DS(0.0)ES(0.0)S(0.0)Y(0.0)R s:Phosphorylated S DLG1 100738.4 3 4 196.99 460.79 HUMAN 1 -5.3322 0.9741 KHVVWHPSQELLASA-p O76071;S161-p KHVVWHPSQELLASA 0.158166667112897 0.410617331567664 -0.232666666666667 0.0873333333333334 16.0686618368909 5.14227084590826 -0.232666666666667 0.0873333333333333 0.0247248585851399 0.306036280787602 -3.08138519375265 1.1298332946985 O76071 CIAO1 O76071.S161.p_CIAO1 O76071_S161s _1_1_161_161 O76071 O76071 Probable cytosolic iron-sulfur protein assembly protein CIAO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21539.21539.4 11.05 11.05 11.055 5 1 1 0 730.8754 2840.4983 S161s TMT10 155 (K) HVVWHPsQELLASASYDDTVK (L) HVVWHPS(0.99)QELLAS(0.0)AS(0.0)Y(0.0)DDT(0.0)VK K:TMT10,s:Phosphorylated S CIAO1 38866.3 1 1 4994.1 24.09 HUMAN 1 -16.0687 5.1423 KIACLDFSLQKTKMK-p P17987;S240-p KIACLDFSLQKTKMK 0.444245028437086 0.0631438118737972 -0.111 0.218666666666667 6.49379078044822 15.9713954895614 -0.111 0.218666666666667 0.224192418476929 0.0252848540450987 -1.37207927431381 3.06054206676374 P17987 TCP1 P17987.S240.p_TCP1 P17987_S240s _1_1_240_240 P17987 P17987|E7ERF2|E7EQR6|F5H282 T-complex protein 1 subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27461.27461.3 8.79 8.29 99 1 1 1 0 578.3085 1652.9446 S240s TMT10 234 (K) IACLDFsLQK (T) IACLDFS(1.0)LQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TCP1 60856 2 5 1979.1 104.48 HUMAN 1 -6.4938 15.9714 KIADFGLSKWRMMSL-p O43353;S168-p KIADFGLSKWRMMSL 0.112881512001172 0.67383763927493 0.656666666666667 -0.0893333333333333 19.7772524080878 2.34325941906836 0.656666666666667 -0.0893333333333333 0.0105262761482451 0.583007387761696 3.83130857627539 -0.583473178673875 O43353 RIPK2 O43353.S168.p_RIPK2 O43353_S168s _1_1_168_168 O43353 O43353|O43353-2 Receptor-interacting serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26340.26340.3 10.79 5.79 99 1 1 1 0 577.6522 1650.9732 S168s TMT10 162 (K) IADFGLsKWR (M) IADFGLS(1.0)KWR K:TMT10,s:Phosphorylated S RIPK2 61764.4 2 1 1914.1 107.79 HUMAN 1 19.7773 -2.3433 KIAEQVASFQEEKSK-p P35221;S690-p KIAEQVASFQEEKSK 0.421053324853859 0.124968232578908 -0.107666666666667 -0.188666666666667 6.92487625176368 11.9125050682285 -0.107666666666667 -0.188666666666667 0.203007636420288 0.0643797807272172 -1.44785668539648 -2.31567946965613 P35221 CTNNA1 P35221.S690.p_CTNNA1 P35221_S690s _1_1_690_690 P35221 P35221-2|G3XAM7|P35221-3 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19297.19297.2 16.85 16.85 99 1 1 1 0 958.9926 1837.0108 S690s TMT10 684 (K) IAEQVAsFQEEK (S) IAEQVAS(1.0)FQEEK K:TMT10,s:Phosphorylated S CTNNA1 100754.2 2 17 169.1 491.55 HUMAN 1 -6.9249 -11.9125 KIAKEEESEDESNEE-p P51531;S1512-p KIAKEEESEDESNEE 0.0391574900042898 0.522504761726917 0.5205 -0.065 31.9216550712338 3.78776009446225 0.5205 -0.065 0.000642442839396743 0.418045921294764 7.03877751161574 -0.876193247559096 P51531 SMARCA2 P51531.S1512.p_SMARCA2 P51531_S1512sS1516s_2_2_1512_1516 P51531 P51531|P51531-2|B1ALG1 Probable global transcription activator SNF2L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11888.11888.4 13.1 13.1 3.865 4 2 2 0 1155.7577 4460.0777 S1512s S1516s TMT10 1504 (R) QKIAKEEEsEDEsNEEEEEEDEEESESEAK (S) QKIAKEEES(0.99)EDES(0.99)NEEEEEEDEEES(0.0)ES(0.0)EAK K:TMT10,s:Phosphorylated S SMARCA2 181903.8 2 26 392.2 331.85 HUMAN 2 31.9217 -3.7878 KIAKLDVSNVATDTE-p P50851;S1247-p KIAKLDVSNVATDTE 0.17776892686696 0.115421064359272 -0.270333333333333 -0.506 14.8665767722359 12.3721136165154 -0.270333333333333 -0.506 0.0326093635640385 0.0579146769728139 -2.85346479180635 -2.39727640612764 P50851 LRBA P50851.S1247.p_LRBA P50851_S1247s _1_1_1247_1247 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25573.25573.3 15.77 15.77 3.308 3 1 1 0 781.086 2261.2753 S1247s TMT10 1244 (K) LDVsNVATDTERLELK (A) LDVS(0.99)NVAT(0.0)DT(0.0)ERLELK K:TMT10,s:Phosphorylated S LRBA 321783.7 1 11 74.1 649.16 HUMAN 1 -14.8666 -12.3721 KIAQEIASLSKEDVS-p Q15311;S461-p KIAQEIASLSKEDVS 0.205398405857737 0.00626582857597616 -0.401666666666667 0.651666666666667 13.2909540058738 31.7429157984187 -0.401666666666667 0.651666666666667 0.0468710410171368 0.000669435008277268 -2.56362985720179 6.96854422387129 Q15311 RALBP1 Q15311.S461.p_RALBP1 Q15311_S461s _1_1_461_461 Q15311 Q15311 RalA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23370.23370.2 14.31 6.86 2.343 2 1 1 0 799.4526 1517.9303 S461s TMT10 455 (K) IAQEIAsLSK (E) IAQEIAS(0.99)LS(0.0)K K:TMT10,s:Phosphorylated S RALBP1 76461.4 4 5 822.1 218.43 HUMAN 1 -13.291 31.7429 KICNGGLSPGNPGDS-p Q9H792;S370-p KICNGGLSPGNPGDS 0.215792279025167 0.0149985430633291 -0.247666666666667 -0.416333333333333 12.8328424387749 25.2396732022598 -0.247666666666667 -0.416333333333333 0.0520853703006279 0.00299248980689109 -2.48098920601805 -5.09829289883738 Q9H792 PEAK1 Q9H792.S370.p_PEAK1 Q9H792_S370s _1_1_370_370 Q9H792 Q9H792|H0YN99 Pseudopodium-enriched atypical kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13680.13680.2 11.08 11.08 1.491 2 1 1 0 1005.9935 1931.0057 S370s TMT10 364 (K) ICNGGLsPGNPGDSK (D) ICNGGLS(0.99)PGNPGDS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PEAK1 195156.9 1 3 583.1 265.81 HUMAN 1 -12.8328 -25.2397 KICRDPQTPVLQTKH-p Q9ULW0;T369-p KICRDPQTPVLQTKH 0.667332695561759 0.00462437619115908 0.0856666666666667 -0.608333333333333 3.2840664731696 34.1771207408386 0.0856666666666667 -0.608333333333333 0.469454333853491 0.000382197573888797 0.777541763970089 -7.7961421642159 Q9ULW0 TPX2 Q9ULW0.T369.p_TPX2 Q9ULW0_T369t _1_1_369_369 Q9ULW0 Q9ULW0-2 Targeting protein for Xklp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12485.12485.3 13.34 7.41 5.968 2 1 1 0 698.7122 2014.152 T369t TMT10 363 (K) ICRDPQtPVLQTK (H) ICRDPQT(0.99)PVLQT(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T TPX2 86279.1 3 10 599.1 263.33 HUMAN 1 3.2841 -34.1771 KIDSRPPSPEPPKQE-p Q15911;S2230-p KIDSRPPSPEPPKQE 0.0977878318182972 0.0255119883790317 -0.923666666666667 0.392 21.371670930728 21.6808293393207 -0.923666666666667 0.392 0.00729176908365465 0.00679073942620528 -4.17970637643614 4.2449171242791 Q15911 ZFHX3 Q15911.S2230.p_ZFHX3 Q15911_S2230s _1_1_2230_2230 Q15911 Q15911|Q15911-2 Zinc finger homeobox protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15806.15806.4 13.29 10.7 2.099 4 1 1 0 742.1415 2885.5765 S2230s TMT10 2224 (K) IDSRPPsPEPPKQEYWGSK (R) IDS(0.0)RPPS(0.99)PEPPKQEY(0.0)WGS(0.0)K K:TMT10,s:Phosphorylated S ZFHX3 409090.1 1 8 529.1 281.73 HUMAN 1 -21.3717 21.6808 KIEDEEGS_______-p P12004;S261-p KIEDEEGS_______ 0.827721689148675 0.0249918453911387 -0.034 -0.599666666666667 1.57919859763698 21.7975348338221 -0.034 -0.599666666666667 0.695152582060906 0.00661068580906729 -0.413455505273636 -4.27132034166843 P12004 PCNA P12004.S261.p_PCNA P12004_S261s _1_1_261_261 P12004 P12004 Proliferating cell nuclear antigen HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21954.21954.3 16.25 16.25 16.247 3 1 1 0 684.6721 1972.0315 S261s TMT10 249 (K) YYLAPKIEDEEGs (-) Y(0.0)Y(0.0)LAPKIEDEEGS(0.99) K:TMT10,s:Phosphorylated S PCNA 29110.6 5 2 4661.1 28.28 HUMAN 1 -1.5792 -21.7975 KIEDTGGSGGSYSIK-p Q14457;S409-p KIEDTGGSGGSYSIK 0.715840758445085 0.0391839494364153 -0.055 -0.313666666666667 2.73929992646302 18.8879265198685 -0.055 -0.313666666666667 0.532194040908645 0.0129183589593942 -0.666944824525749 -3.64107937233491 Q14457 BECN1 Q14457.S409.p_BECN1 Q14457_S409s _1_1_409_409 Q14457 Q14457 Beclin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12990.12990.3 10.37 10.37 1.171 5 1 1 0 775.0769 2243.2486 S409s TMT10 401 (K) GKIEDTGGsGGSYSIK (T) GKIEDT(0.0)GGS(0.99)GGS(0.0)Y(0.0)S(0.0)IK K:TMT10,s:Phosphorylated S BECN1 52408.9 1 6 1624.1 126.53 HUMAN 1 -2.7393 -18.8879 KIEKEDDSEGEESEE-p A0A0A0MT49;S1604-p KIEKEDDSEGEESEE 0.916145150674614 0.0320849526179946 -0.0168333333333333 0.298166666666667 0.742529170020906 20.1553339004749 -0.0168333333333333 0.298166666666667 0.842843773852525 0.0096486512681762 -0.207986192442856 3.90867245691116 A0A0A0MT49 NotFound A0A0A0MT49.S1604.p_NotFound A0A0A0MT49_S1604sS1609s_2_2_1604_1609 A0A0A0MT49 A0A0A0MT49|Q9HBD4|P51532|P51532-4|P51532-3 Transcription activator BRG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9396.9396.4 14.72 14.72 12.076 5 2 2 0 1073.7034 4131.8576 S1604s S1609s TMT10 1596 (R) QKIEKEDDsEGEEsEEEEEGEEEGSESESR (S) QKIEKEDDS(0.99)EGEES(0.99)EEEEEGEEEGS(0.0)ES(0.0)ES(0.0)R K:TMT10,s:Phosphorylated S SMARCA4 189484.7 2 17 392.1 331.85 HUMAN 2 -0.7425 20.1553 KIEVKEESPQSKAET-p P11171;S188-p KIEVKEESPQSKAET 0.969003701508516 0.0281259447324676 -0.00766666666666667 0.301666666666667 0.26796646339584 21.0179152277186 -0.00766666666666668 0.301666666666667 0.940163428800722 0.00791058273761321 -0.078615984742491 4.09680677918303 P11171 EPB41 P11171.S188.p_EPB41 P11171_S188sS191s_2_2_188_191 P11171 P11171|P11171-2|P11171-5|P11171-7 Protein 4.1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17406.17406.3 9 6.26 2.399 3 2 2 0 1007.8749 2861.6642 S188s S191s TMT10 182 (K) IEVKEEsPQsKAETELK (A) IEVKEES(0.99)PQS(0.99)KAET(0.0)ELK K:TMT10,s:Phosphorylated S EPB41 97585.6 2 33 469.3 302.69 HUMAN 1 -0.268 21.0179 KIFFAGDTIPKSPFV-p O75369-8;T436-p KIFFAGDTIPKSPFV 0.278653304461677 0.340132630660249 -0.186 0.11 10.4958070057558 6.20430441287877 -0.186 0.11 0.0892111832015804 0.23964565471214 -2.06799636769643 1.32055399852805 O75369 FLNB O75369.8.T436.p_FLNB O75369-8_T436t _1_1_436_436 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|O75369-4|O75369-5 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28666.28666.2 11.9 9.11 99 1 1 1 0 823.9504 1566.9296 T436t TMT10 430 (K) IFFAGDtIPK (S) IFFAGDT(1.0)IPK K:TMT10,t:Phosphorylated T FLNB 283797.6 2 4 67.1 680.07 HUMAN 1 -10.4958 6.2043 KIFFRKMSSSGAKDK-p P09543;S22-p KIFFRKMSSSGAKDK 0.277318502570709 0.0294176315576497 -0.231333333333333 0.950333333333333 10.5375242174535 20.7277566419569 -0.231333333333333 0.950333333333333 0.0883583461294905 0.00845715588664715 -2.07527148592738 4.03295454113244 P09543 CNP P09543.S22.p_CNP P09543_S22s _1_1_22_22 P09543 P09543 2',3'-cyclic-nucleotide 3'-phosphodiesterase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.3935.3935.2 8.36 3.22 1.109 3 1 1 0 667.3501 1253.7288 S22s Hydrogen 20 (R) KMsSSGAK (D) KMS(0.99)S(0.0)S(0.0)GAK K:TMT10-Lys-Only,s:Phosphorylated S CNP 47977.1 2 1 2334.1 87.42 HUMAN 1 -10.5375 20.7278 KIFLDLDTDDDLNSD-p Q92995;T122-p KIFLDLDTDDDLNSD 0.706465055316072 0.565469947767968 0.0606666666666667 0.0543333333333334 2.83725964247947 3.33856462547338 0.0606666666666666 0.0543333333333334 0.520324212678698 0.463600117594619 0.687159518496016 0.788260258992576 Q92995 USP13 Q92995.T122.p_USP13 Q92995_T122t _1_1_122_122 Q92995 Q92995|Q92995-2 Ubiquitin carboxyl-terminal hydrolase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32292.32292.3 20.36 20.36 2.295 4 1 1 0 1097.8168 3211.4731 T122t TMT10 116 (K) IFLDLDtDDDLNSDDYEYEDEAK (L) IFLDLDT(0.99)DDDLNS(0.0)DDY(0.0)EY(0.0)EDEAK K:TMT10,t:Phosphorylated T USP13 98067.1 3 3 1969.1 104.91 HUMAN 1 2.8373 3.3386 KIFMVGESPQVSSRL-p Q8NG08;S1058-p KIFMVGESPQVSSRL 0.989497403870838 0.0309528878523712 -0.00633333333333336 -0.749 0.0935028375497467 20.3969466864114 -0.00633333333333331 -0.749 0.97870028828679 0.00912652255333346 -0.0279547302273309 -3.96086142245729 Q8NG08 HELB Q8NG08.S1058.p_HELB Q8NG08_S1058s _1_1_1058_1058 Q8NG08 Q8NG08 DNA helicase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23237.23237.3 17.26 17.26 7.138 3 1 1 0 582.6218 1665.8832 S1058s TMT10 1052 (K) IFMVGEsPQVSSR (L) IFMVGES(0.99)PQVS(0.0)S(0.0)R s:Phosphorylated S HELB 124961.8 1 5 2553.1 78.8 HUMAN 1 -0.0935 -20.3969 KIFTTPLTPSQYYSG-p P49454;T154-p KIFTTPLTPSQYYSG 0.663036242222824 0.00360332108061802 -0.0653333333333333 -0.917 3.33917515482058 36.3449429462605 -0.0653333333333333 -0.917 0.46353494946678 0.000232009466470596 -0.78849945315233 -8.60276644368377 P49454 CENPF P49454.T154.p_CENPF P49454_T154t _1_1_154_154 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27342.27342.4 20.77 20.77 3.1 9 1 1 0 802.1735 3125.7014 T154t TMT10 148 (K) IFTTPLtPSQYYSGSKYEDLK (E) IFT(0.0)T(0.0)PLT(0.99)PS(0.0)QY(0.0)Y(0.0)S(0.0)GS(0.0)KY(0.0)EDLK K:TMT10,t:Phosphorylated T CENPF 371067.2 2 3 47.1 771.73 HUMAN 1 -3.3392 -36.3449 KIFVGGLSPDTPEEK-p Q14103;S190-p KIFVGGLSPDTPEEK 0.537012555359345 0.0309281815065414 0.108333333333333 0.324666666666667 4.99496927514122 20.4022538958117 0.108333333333333 0.324666666666667 0.316594286132291 0.00911537647964237 1.1031361132412 3.96201217118773 Q14103 HNRNPD Q14103.S190.p_HNRNPD Q14103_S190s _1_1_190_190 Q14103 Q14103|Q14103-2|Q14103-3|Q14103-4 Heterogeneous nuclear ribonucleoprotein D0 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20905.20905.3 20.17 20.17 2.507 2 1 1 0 795.4409 2304.3418 S190s TMT10 183 (K) KIFVGGLsPDTPEEK (I) KIFVGGLS(0.99)PDT(0.0)PEEK K:TMT10,s:Phosphorylated S HNRNPD 38604.6 7 4 1392.1 147 HUMAN 1 4.995 20.4023 KIGAFLHSQGTGQLA-p Q969R5;S158-p KIGAFLHSQGTGQLA 0.166418742440273 0.0117248455316104 0.247333333333333 -0.429 15.5796219987304 27.001176804551 0.247333333333333 -0.429 0.027671824849839 0.00199472173345638 2.98788315945472 -5.5614542566998 Q969R5 L3MBTL2 Q969R5.S158.p_L3MBTL2 Q969R5_S158s _1_1_158_158 Q969R5 Q969R5|Q969R5-3|Q969R5-2 Lethal(3)malignant brain tumor-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23856.23856.4 7.1 7.1 7.102 4 1 1 0 892.4455 3486.7855 S158s Hydrogen 152 (K) IGAFLHsQGTGQLADGTPTGQDALVLGFDWGK (F) IGAFLHS(0.99)QGT(0.0)GQLADGT(0.0)PT(0.0)GQDALVLGFDWGK K:TMT10-Lys-Only,s:Phosphorylated S L3MBTL2 80135.7 1 1 2538.1 79.35 HUMAN 1 15.5796 -27.0012 KIGNPVPYNEGLGQP-p P27694;Y118-p KIGNPVPYNEGLGQP 0.978588331593317 0.0262377057275732 0.00533333333333333 -0.375666666666667 0.186306783487324 21.492660101027 0.00533333333333331 -0.375666666666667 0.958008410101562 0.00709143276927034 0.055136283510984 -4.20255530520851 P27694 RPA1 P27694.Y118.p_RPA1 P27694_Y118y_1_1_118_118 P27694 P27694 Replication protein A 70 kDa DNA-binding subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21119.21407.4 12.82 10.5 1.464 9 1 1 0 1249.8743 4914.5209 Y118y N119n N146n TMT10 112 (K) IGNPVPynEGLGQPQVAPPAPAASPAASSRPQPQnGSSGMGSTVSK (A) IGN(0.0)PVPY(0.99)N(0.99)EGLGQPQVAPPAPAAS(0.0)PAAS(0.0)S(0.0)RPQPQN(0.99)GS(0.0)S(0.0)GMGS(0.0)T(0.0)VS(0.0)K K:TMT10,y:Phosphorylated Y,n:Deamidated RPA1 68764.6 4 2 1852.1 110.98 HUMAN 1 0.1863 -21.4927 KIGPLGLSPKKVGDD-p P30050;S38-p KIGPLGLSPKKVGDD 0.0628764257048439 0.000952253650599092 -0.515 -1.57466666666667 26.1091227064065 56.4782765111821 -0.515 -1.57466666666667 0.00244955801315871 2.24994731570486e-06 -5.33028028226235 -20.7445504637861 P30050 RPL12 P30050.S38.p_RPL12 P30050_S38s _1_1_38_38 P30050 P30050 60S ribosomal protein L12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23781.23989.2 12.84 5.45 99 1 1 1 0 710.4217 1339.8713 S38s TMT10 32 (K) IGPLGLsPK (K) IGPLGLS(1.0)PK K:TMT10,s:Phosphorylated S RPL12 17989.4 11 2 1867.1 110.2 HUMAN 1 -26.1091 -56.4783 KIGSPPKTPVSNVAA-p Q9HBD1;T553-p KIGSPPKTPVSNVAA 0.108085133456159 0.354784657364479 -0.328666666666667 -0.103333333333333 20.3006956269339 5.96760049294578 -0.328666666666667 -0.103333333333333 0.00933104829674184 0.253069583720803 -3.94378212326499 -1.27848710879731 Q9HBD1 RC3H2 Q9HBD1.T553.p_RC3H2 Q9HBD1_S549sT553t_2_2_549_553 Q9HBD1 Q9HBD1|Q9HBD1-4|Q9HBD1-6 Roquin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22839.22839.5 14.04 6.89 1.295 8 2 2 0 791.2158 3792.111 S549s T553t TMT10 547 (K) IGsPPKtPVSNVAATSAGPSNVGTELNSVPQK (S) IGS(0.99)PPKT(0.99)PVS(0.0)NVAAT(0.0)S(0.0)AGPS(0.0)NVGT(0.0)ELNS(0.0)VPQK K:TMT10,s:Phosphorylated S,t:Phosphorylated T RC3H2 132864.3 3 8 1922.1 106.92 HUMAN 1 -20.3007 -5.9676 KIGTLHTSPDLKVRP-p Q9UPZ3;S563-p KIGTLHTSPDLKVRP 0.653312525760824 0.0369344746865729 -0.0896666666666667 -0.373666666666667 3.46739745371357 19.2586029986602 -0.0896666666666667 -0.373666666666667 0.450049470038717 0.0118615023746882 -0.813847215984256 -3.71829823158605 Q9UPZ3 HPS5 Q9UPZ3.S563.p_HPS5 Q9UPZ3_S563s _1_1_563_563 Q9UPZ3 Q9UPZ3|Q9UPZ3-2 Hermansky-Pudlak syndrome 5 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15911.15911.3 13.71 13.71 1.422 3 1 1 0 573.9861 1639.9783 S563s TMT10 557 (K) IGTLHTsPDLK (V) IGT(0.0)LHT(0.0)S(0.99)PDLK K:TMT10,s:Phosphorylated S HPS5 129386.8 5 3 2159.1 95.05 HUMAN 1 -3.4674 -19.2586 KIHARSMSVERDIRF-p P35998;S363-p KIHARSMSVERDIRF 0.979581319517869 0.622497374464945 -0.00433333333333334 0.0633333333333334 0.177216280715508 2.79787277768707 -0.00433333333333334 0.0633333333333334 0.960015780512852 0.52506457970184 -0.052497600765755 0.67895853900907 P35998 PSMC2 P35998.S363.p_PSMC2 P35998_S363s _1_1_363_363 P35998 P35998|A0A1W2PQS1|P35998-2 26S proteasome regulatory subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9625.9625.3 10.05 5.1 2.81 2 1 1 0 467.8971 1321.7096 S363s TMT10 361 (R) SMsVERDIR (F) S(0.0)MS(0.99)VERDIR s:Phosphorylated S PSMC2 49032.4 2 1 5491.1 18.81 HUMAN 1 -0.1772 2.7979 KIHLRPPSPEIQAAD-p Q5JWF2;S532-p KIHLRPPSPEIQAAD 0.657302725891418 0.0312932403578221 0.0593333333333333 0.303666666666667 3.4192336202158 20.3225654682851 0.0593333333333333 0.303666666666667 0.455068356915006 0.00928417788967138 0.804349668339258 3.94475341032804 Q5JWF2 GNAS Q5JWF2.S532.p_GNAS Q5JWF2_S532s _1_1_532_532 Q5JWF2 Q5JWF2|Q5JWF2-2|Q5JWF2-3|X6R7U9 Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14282.14282.5 7.07 7.07 7.07 3 1 1 0 551.8996 2675.4943 S532s TMT10 526 (K) IHLRPPsPEIQAADPPTPRPTR (A) IHLRPPS(0.99)PEIQAADPPT(0.0)PRPT(0.0)R s:Phosphorylated S GNAS 111764.2 1 1 3854.1 41.67 HUMAN 1 3.4192 20.3226 KIHMRKHTGERPYSC-p O15156;T397-p KIHMRKHTGERPYSC 0.3851629764389 0.00292573679022132 -0.134 -0.813333333333333 7.67007651082379 38.22481973806 -0.134 -0.813333333333333 0.170998518955717 0.000150493598265161 -1.57786983340845 -9.3608787973081 O15156 ZBTB7B O15156.T397.p_ZBTB7B O15156_T397t _1_1_397_397 O15156 O15156-2 Zinc finger and BTB domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.3563.3563.4 12.24 12.24 2.23 3 1 1 0 623.5518 2411.2225 T397t TMT10 395 (R) KHtGERPYSCPHCPAR (F) KHT(0.99)GERPY(0.0)S(0.0)CPHCPAR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ZBTB7B 58938.8 2 5 701.1 240.09 HUMAN 1 -7.6701 -38.2248 KIIGATDSCGDLMFL-p P45973;S132-p KIIGATDSCGDLMFL 0.327770976645339 0.0528910826295034 0.136 0.235 9.06009268735738 17.0296599057159 0.136 0.235 0.124162580846615 0.0198168220447551 1.81876585795311 3.26598478382803 P45973 CBX5 P45973.S132.p_CBX5 P45973_S132s _1_1_132_132 P45973 P45973 Chromobox protein homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.35799.36009.3 14.56 13.05 2.411 2 1 1 0 770.7179 2230.1686 S132s TMT10 126 (K) IIGATDsCGDLMFLMK (W) IIGAT(0.0)DS(0.99)CGDLMFLMK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CBX5 22395.7 4 5 1801.1 114.16 HUMAN 1 9.0601 17.0297 KIKDALPSPGEWEDL-p Q8NI08-2;S295-p KIKDALPSPGEWEDL 0.839353804661943 0.603467539993015 -0.035 -0.053 1.46959292304352 2.97577690330085 -0.035 -0.053 0.712919851063564 0.50399045289358 -0.387849401352693 -0.715388063717173 Q8NI08 NCOA7 Q8NI08.2.S295.p_NCOA7 Q8NI08-2_S295s _1_1_295_295 Q8NI08-2 Q8NI08-2|Q8NI08-7 Isoform 2 of Nuclear receptor coactivator 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28867.28867.3 12.82 12.82 6.988 2 1 1 0 918.1493 2672.475 S295s TMT10 289 (K) IKDALPsPGEWEDLASEK (D) IKDALPS(0.99)PGEWEDLAS(0.0)EK K:TMT10,s:Phosphorylated S NCOA7 105415.6 1 4 906.1 202.52 HUMAN 1 -1.4696 -2.9758 KIKEEVLSESEAENQ-p Q9UJX5-3;S778-p KIKEEVLSESEAENQ 0.852742978991457 0.255669349113953 -0.029 0.144666666666667 1.34168185431962 7.80210916416268 -0.029 0.144666666666667 0.734229474455692 0.165878111976633 -0.357518272619132 1.60031793022041 Q9UJX5 ANAPC4 Q9UJX5.3.S778.p_ANAPC4 Q9UJX5-3_S778sS780s_2_2_778_780 Q9UJX5-3 Q9UJX5-3 Isoform 3 of Anaphase-promoting complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36584.36584.5 21.28 21.28 21.279 3 2 2 0 1028.7411 4979.7486 S778s S780s TMT10 772 (K) IKEEVLsEsEAENQQAGAAALAPEIVIKVEKLDPELDS (-) IKEEVLS(0.99)ES(0.99)EAENQQAGAAALAPEIVIKVEKLDPELDS(0.0) K:TMT10,s:Phosphorylated S ANAPC4 93012.6 7 4 2151.1 95.72 HUMAN 1 -1.3417 7.8021 KIKFPKFSMPKIGIP-p Q09666;S5237-p KIKFPKFSMPKIGIP 0.318436709095685 0.249327260461991 -0.179333333333333 0.231666666666667 9.30065504266235 7.94756442683102 -0.179333333333333 0.231666666666667 0.117472035950701 0.160414476122285 -1.86042109385708 1.62555141166286 Q09666 AHNAK Q09666.S5237.p_AHNAK Q09666_S5237s _1_1_5237_5237 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23602.23602.4 12.25 12.25 99 1 1 1 0 555.5858 2139.3534 S5237s TMT10 5231 (K) IKFPKFsMPK (I) IKFPKFS(1.0)MPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 124 1.1 4313.36 HUMAN 1 -9.3007 7.9476 KIKGDVPSVGLEGPD-p Q09666;S5214-p KIKGDVPSVGLEGPD 0.899823296260135 0.347291864861602 0.02 0.129666666666667 0.897137500069336 6.08902951087289 0.02 0.129666666666667 0.81336644152167 0.246091746764264 0.247873627377043 1.30009436453641 Q09666 AHNAK Q09666.S5214.p_AHNAK Q09666_S5214s _1_1_5214_5214 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23845.23845.4 18.31 18.31 99 1 1 1 0 772.671 3007.6919 S5214s TMT10 5208 (K) IKGDVPsVGLEGPDVDLQGPEAK (I) IKGDVPS(1.0)VGLEGPDVDLQGPEAK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 123 1.1 4313.36 HUMAN 1 0.8971 6.089 KIKIEPDSEKDEVKG-p Q12830;S1093-p KIKIEPDSEKDEVKG 0.159845829771225 0.901196265560022 -0.665333333333333 -0.0133333333333333 15.947890539813 0.631460798560922 -0.665333333333334 -0.0133333333333333 0.0254220720954262 0.864677025968203 -3.05819110392934 -0.178678334503836 Q12830 BPTF Q12830.S1093.p_BPTF Q12830_S1093s _1_1_1093_1093 Q12830 Q12830|Q12830-2|Q12830-4 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14822.14822.4 10.7 3.4 99 1 1 1 0 632.3615 2446.4575 S1093s TMT10 1087 (K) IKIEPDsEKDEVK (G) IKIEPDS(1.0)EKDEVK K:TMT10,s:Phosphorylated S BPTF 340995.1 1 9 94.1 610.41 HUMAN 1 -15.9479 -0.6315 KIKKQEDSDKDSDEE-p P29374;S538-p KIKKQEDSDKDSDEE 0.233628206047255 0.00413940785491187 -0.551666666666667 0.667666666666667 12.1261189781305 35.0683932540952 -0.551666666666667 0.667666666666667 0.0612897856075228 0.000311286778219058 -2.35472472096493 8.11942565875709 P29374 ARID4A P29374.S538.p_ARID4A P29374_S538sS542s_2_2_538_542 P29374 P29374|P29374-2|P29374-3 AT-rich interactive domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9120.9120.5 10.65 10.65 99 2 2 2 0 672.3412 3197.7398 S538s S542s TMT10 532 (K) IKKQEDsDKDsDEEEEK (S) IKKQEDS(1.0)DKDS(1.0)DEEEEK K:TMT10,s:Phosphorylated S ARID4A 143719.1 6 14 532.1 280.77 HUMAN 1 -12.1261 35.0684 KIKPHLMSQELPEDW-p P07237;S357-p KIKPHLMSQELPEDW 0.654952568972503 0.63102673367222 0.0823333333333333 0.0866666666666667 3.44498140443325 2.71803524319452 0.0823333333333334 0.0866666666666667 0.452378399316518 0.534806252080185 0.809430444894052 0.662448097381491 P07237 P4HB P07237.S357.p_P4HB P07237_S357s _1_1_357_357 P07237 P07237 Protein disulfide-isomerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21325.21325.5 16.95 12.14 99 1 1 1 0 683.7789 3334.9003 S357s TMT10 351 (K) IKPHLMsQELPEDWDKQPVK (V) IKPHLMS(1.0)QELPEDWDKQPVK K:TMT10,s:Phosphorylated S P4HB 57514.7 1 6 2940.1 65.3 HUMAN 1 3.445 2.718 KIKPRLKSEDGVEGD-p Q09666;S135-p KIKPRLKSEDGVEGD 0.0160741487649029 0.00104745705872082 -1.07533333333333 -1.89466666666667 42.2527192530959 51.0368671034753 -1.07533333333333 -1.89466666666667 5.95289297634968e-05 7.87613750536517e-06 -11.2203815376289 -16.4117468298473 Q09666 AHNAK Q09666.S135.p_AHNAK Q09666_S135s _1_1_135_135 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13575.14003.3 14.78 14.78 5.003 3 1 1 0 786.7249 2278.1927 S135s TMT10 133 (R) LKsEDGVEGDLGETQSR (T) LKS(0.99)EDGVEGDLGET(0.0)QS(0.0)R K:TMT10,s:Phosphorylated S AHNAK 629603.7 6 6 1.1 4313.36 HUMAN 1 -42.2527 -51.0369 KIKQEVESPTDKSGN-p P10242-4;S653-p KIKQEVESPTDKSGN 0.281655667968343 0.101276297312324 -0.271666666666667 0.191666666666667 10.4031888199407 13.1396394007073 -0.271666666666667 0.191666666666667 0.0911341438513429 0.0485328795851435 -2.05185355417529 2.53485123288826 P10242 MYB P10242.4.S653.p_MYB P10242-4_S653s _1_1_653_653 P10242-4 P10242-4|P10242-7|P10242-8|E9PLN0|P10242-9|P10242-11|F8W8G5|P10242-6|A0A087WTI6|P10242-2|Q708E1 Isoform 4 of Transcriptional activator Myb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11780.11780.3 13.93 13.93 1.394 2 1 1 0 681.0446 1961.1522 S653s TMT10 647 (K) IKQEVEsPTDK (S) IKQEVES(0.99)PT(0.0)DK K:TMT10,s:Phosphorylated S MYB 86101 4 1 3232.1 56.48 HUMAN 1 -10.4032 13.1396 KIKSEPSSPRLASSP-p Q8WW38;S476-p KIKSEPSSPRLASSP 0.43606840550564 0.00830574377819257 -0.111 -0.456 6.63395190743957 29.5770264863382 -0.111 -0.456 0.21707250062683 0.00110229376622648 -1.39677366940227 -6.2946653970519 Q8WW38 ZFPM2 Q8WW38.S476.p_ZFPM2 Q8WW38_S476s _1_1_476_476 Q8WW38 Q8WW38|Q8WW38-2|E7ET52 Zinc finger protein ZFPM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6510.6510.3 8.05 4.74 1.397 3 1 1 0 513.618 1458.868 S476s TMT10 470 (K) IKSEPSsPR (L) IKS(0.0)EPS(0.0)S(0.99)PR K:TMT10,s:Phosphorylated S ZFPM2 130381.7 3 4 1154.1 171.84 HUMAN 1 -6.634 -29.577 KIKTELNSSAESEQP-p Q9Y5B6;S154-p KIKTELNSSAESEQP 0.366525683885644 0.138433161882489 -0.135 -0.266333333333333 8.09023056033432 11.3120120796308 -0.135 -0.266333333333333 0.155230459828066 0.0739262696440174 -1.65080967062759 -2.20983510555591 Q9Y5B6 PAXBP1 Q9Y5B6.S154.p_PAXBP1 Q9Y5B6_S154sS155s_2_2_154_155 Q9Y5B6 Q9Y5B6|Q9Y5B6-2|Q9Y5B6-4|Q9Y5B6-3 PAX3- and PAX7-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18871.18871.3 12.37 12.37 1.156 4 2 2 0 912.7958 2576.4386 S154s S155s TMT10 148 (K) IKTELNssAESEQPLDK (T) IKT(0.0)ELNS(0.99)S(0.99)AES(0.0)EQPLDK K:TMT10,s:Phosphorylated S PAXBP1 105258.2 2 9 978.1 192.69 HUMAN 1 -8.0902 -11.312 KILANADTMKVLGVQ-p Q96A65;T566-p KILANADTMKVLGVQ 0.251728832793614 0.0394283939334698 -0.396333333333333 0.486333333333333 11.4239478174219 18.8390443717903 -0.396333333333333 0.486333333333333 0.0720452276945104 0.0130645833159219 -2.23055535180676 3.63095864570435 Q96A65 EXOC4 Q96A65.T566.p_EXOC4 Q96A65_S555sT566t_2_2_555_566 Q96A65 Q96A65 Exocyst complex component 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32263.32263.5 10.06 5.93 8.67 4 2 2 0 990.7324 4787.7402 N538n N545n S555s T566t Hydrogen 534 (K) NIFLnQVLAEInKEIEGVTKTsDPLKILANADtMK (V) N(0.0)IFLN(0.99)QVLAEIN(0.99)KEIEGVT(0.0)KT(0.0)S(0.99)DPLKILAN(0.0)ADT(0.99)MK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S,t:Phosphorylated T EXOC4 111237.8 1 8 1685.1 121.05 HUMAN 1 -11.4239 18.839 KILDTALSKIGEKSL-p P08397;S69-p KILDTALSKIGEKSL 0.255523666986709 0.043467848861138 -0.309333333333333 0.246 11.2662832568385 18.2485203251845 -0.309333333333333 0.246 0.0747087851453346 0.0149674552198201 -2.20282724546604 3.50981321368244 P08397 HMBS P08397.S69.p_HMBS P08397_S69s _1_1_69_69 P08397 P08397|P08397-2 Porphobilinogen deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22226.22226.2 10.91 7.11 3.532 2 1 1 0 699.9048 1318.8346 S69s TMT10 63 (K) ILDTALsK (I) ILDT(0.0)ALS(0.99)K K:TMT10,s:Phosphorylated S HMBS 39557.6 1 2 3408.1 51.78 HUMAN 1 -11.2663 18.2485 KILIIGESGVGKSSL-p Q9NP72-2;S17-p KILIIGESGVGKSSL 0.881535981321572 0.388718896947204 -0.0373333333333334 -0.121666666666667 1.0768030313631 5.45488683848982 -0.0373333333333334 -0.121666666666667 0.780404377605544 0.284781200293752 -0.293034235232914 -1.18654527023802 Q9NP72 RAB18 Q9NP72.2.S17.p_RAB18 Q9NP72-2_S17s _1_1_17_17 Q9NP72-2 Q9NP72-2|A0A087X163|Q5W0J0|Q9NP72-3 Isoform 2 of Ras-related protein Rab-18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26703.26703.3 10.85 10.85 99 1 1 1 0 541.9883 1543.9824 S17s TMT10 11 (K) ILIIGEsGVGK (S) ILIIGES(1.0)GVGK K:TMT10,s:Phosphorylated S RAB18 26694.9 2 1 3683.1 45.44 HUMAN 1 -1.0768 -5.4549 KILIVTQTPHYMRRH-p Q6PKG0;T649-p KILIVTQTPHYMRRH 0.231180990787114 0.0249522643694336 -0.181333333333333 -0.357666666666667 12.2276821065825 21.8071731842028 -0.181333333333333 -0.357666666666667 0.0598731061359438 0.00659603090138449 -2.37278533781511 -4.27350537302235 Q6PKG0 LARP1 Q6PKG0.T649.p_LARP1 Q6PKG0_T649t _1_1_649_649 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20082.20284.3 19.26 15.53 2.172 3 1 1 0 594.3176 1700.9719 T649t TMT10 643 (K) ILIVTQtPHYMR (R) ILIVT(0.0)QT(0.99)PHY(0.0)MR t:Phosphorylated T LARP1 123907.4 17 51 28.1 931.95 HUMAN 1 -12.2277 -21.8072 KILIVTQTPPYVKKH-p Q659C4;T454-p KILIVTQTPPYVKKH 0.827125066588072 0.747497134073955 0.0306666666666667 0.0353333333333334 1.58663582588909 1.74440273672204 0.0306666666666667 0.0353333333333334 0.693963162350836 0.669205846219674 0.415180658362982 0.451373469309503 Q659C4 LARP1B Q659C4.T454.p_LARP1B Q659C4_T454t _1_1_454_454 Q659C4 Q659C4|Q659C4-2|Q659C4-9|D6R9W6|Q659C4-4 La-related protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25556.25757.3 17.59 17.59 2.098 3 1 1 0 756.4646 2187.4084 T454t TMT10 448 (K) ILIVTQtPPYVKK (H) ILIVT(0.0)QT(0.99)PPY(0.0)VKK K:TMT10,t:Phosphorylated T LARP1B 105833.8 10 7 551.1 274.41 HUMAN 1 1.5866 1.7444 KILKEHDSFDMKDLN-p Q6YHU6;S1015-p KILKEHDSFDMKDLN 0.194045957508738 0.603480979352083 -0.933666666666667 0.062 13.8864897834938 2.97546377996081 -0.933666666666667 0.062 0.0408649546834105 0.504026791569227 -2.6721013962947 0.715324367417553 Q6YHU6 THADA Q6YHU6.S1015.p_THADA Q6YHU6_S1015s _1_1_1015_1015 Q6YHU6 Q6YHU6|Q6YHU6-3|Q6YHU6-2 Thyroid adenoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10523.10523.3 13.82 13.82 99 1 1 1 0 516.2392 1466.735 S1015s TMT10 1012 (K) EHDsFDMK (D) EHDS(1.0)FDMK K:TMT10,s:Phosphorylated S THADA 223026.5 1 1 3808.1 42.65 HUMAN 1 -13.8865 2.9755 KILLDPNSEEVSEKD-p P51531;S666-p KILLDPNSEEVSEKD 0.527089055170996 0.0136990633119768 -0.156 0.386333333333333 5.14767779332442 25.8846537215049 -0.156 0.386333333333333 0.305655504030584 0.00257949462854396 -1.13105323980385 5.2645026692722 P51531 SMARCA2 P51531.S666.p_SMARCA2 P51531_S666s _1_1_666_666 P51531 P51531|P51531-2|F6VDE0|A0A0U1RQZ9 Probable global transcription activator SNF2L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22860.22860.3 12.34 12.34 4.005 2 1 1 0 671.0185 1931.0737 S666s TMT10 660 (K) ILLDPNsEEVSEK (D) ILLDPNS(0.99)EEVS(0.0)EK K:TMT10,s:Phosphorylated S SMARCA2 181903.8 1 22 392.2 331.85 HUMAN 1 -5.1477 25.8847 KILMRGESGEVTDDE-p Q9P212;S1096-p KILMRGESGEVTDDE 0.245929798209507 0.500679238645979 -0.318666666666667 0.103666666666667 11.6572272425492 4.0219399739665 -0.318666666666667 0.103666666666667 0.0682774473058352 0.396101058165552 -2.27167964225029 0.921164479998012 Q9P212 PLCE1 Q9P212.S1096.p_PLCE1 Q9P212_S1096s _1_1_1096_1096 Q9P212 Q9P212|Q9P212-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14914.14914.4 14.9 14.9 3.71 3 1 1 0 669.833 2596.3475 S1096s TMT10 1090 (K) ILMRGEsGEVTDDEMATRK (A) ILMRGES(0.99)GEVT(0.0)DDEMAT(0.0)RK K:TMT10,s:Phosphorylated S PLCE1 261905 1 3 1584.1 129.49 HUMAN 1 -11.6572 4.0219 KILPKRGSEGGVAAF-p Q96T58;S43-p KILPKRGSEGGVAAF 0.707346369684743 0.309266952029794 0.0693333333333333 -0.0973333333333333 2.82596045023681 6.73659963356729 0.0693333333333333 -0.0973333333333333 0.521679721050782 0.212002038376657 0.684835651875865 -1.41444678645347 Q96T58 SPEN Q96T58.S43.p_SPEN Q96T58_S43s _1_1_43_43 Q96T58 Q96T58 Msx2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30625.30625.3 7.41 7.41 99 1 1 1 0 769.0711 2225.233 S43s TMT10 41 (K) RGsEGGVAAFVDFVDIK (S) RGS(1.0)EGGVAAFVDFVDIK K:TMT10,s:Phosphorylated S SPEN 403267.9 1 1 2199.1 93.72 HUMAN 1 2.826 -6.7366 KILPVLGSQTGKI__-p Q9UNI6;S335-p KILPVLGSQTGKI__ 0.472422836600032 0.464839428295449 0.101333333333333 -0.115666666666667 6.00435295688574 4.43639695177124 0.101333333333333 -0.115666666666667 0.25093700155859 0.360047918741308 1.28533899793556 -0.999497776551684 Q9UNI6 DUSP12 Q9UNI6.S335.p_DUSP12 Q9UNI6_S335s _1_1_335_335 Q9UNI6 Q9UNI6 Dual specificity protein phosphatase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31212.31212.3 12.34 12.12 2.315 2 1 1 0 588.6871 1684.0773 S335s TMT10 329 (K) ILPVLGsQTGKI (-) ILPVLGS(0.99)QT(0.0)GKI K:TMT10,s:Phosphorylated S DUSP12 38314.3 1 1 6331.1 12.34 HUMAN 1 6.0044 -4.4364 KILSDMRSQYEVMAE-p P08727;S254-p KILSDMRSQYEVMAE 0.127580448450417 0.00636734716542453 0.277333333333333 0.542333333333333 18.5503156217381 31.6180381999601 0.279162419241389 0.542333333333333 0.0139626688424395 0.000688963445424436 3.57450749539585 6.92815692987321 P08727 KRT19 P08727.S254.p_KRT19 P08727_S254s _1_1_254_254 P08727 P08727 Keratin, type I cytoskeletal 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20893.20893.4 16.24 11.65 1.892 3 1 1 0 684.8465 2656.3951 S254s TMT10 248 (K) ILSDMRsQYEVMAEQNRK (D) ILS(0.0)DMRS(0.99)QY(0.0)EVMAEQNRK K:TMT10,s:Phosphorylated S KRT19 44105.2 2 14 383.1 334.07 HUMAN 1 18.5503 31.618 KILTERGYSFTTTAE-p P63261;Y198-p KILTERGYSFTTTAE 0.545169332387193 0.41204519920352 -0.190666666666667 0.183666666666667 4.8625806885653 5.12186328382624 -0.190666666666667 0.183666666666667 0.326393823002119 0.307477733859849 -1.07881408778734 1.12611166866447 P63261 ACTG1 P63261.Y198.p_ACTG1 P63261_Y198y _1_1_198_198 P63261 P60709|P63261 Actin, cytoplasmic 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11238.11279.2 17.61 8.89 2.158 5 1 1 0 721.3318 1361.6899 Y198y TMT10 197 (R) GySFTTTAER (E) GY(0.99)S(0.0)FT(0.0)T(0.0)T(0.0)AER y:Phosphorylated Y ACTG1 42134.4 2 5 1.1 138.33 HUMAN 1 -4.8626 5.1219 KILTRGESQVKDNTF-p Q9NXL2;S335-p KILTRGESQVKDNTF 0.211864021178947 0.951402560006821 -0.208666666666667 -0.00666666666666664 13.0137797975798 0.309155998300375 -0.208666666666667 -0.00666666666666664 0.0499599528969014 0.931288843227784 -2.51355026513475 -0.0903026653638821 Q9NXL2 ARHGEF38 Q9NXL2.S335.p_ARHGEF38 Q9NXL2_S335s _1_1_335_335 Q9NXL2 Q9NXL2 Rho guanine nucleotide exchange factor 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12547.12547.3 8.93 8.93 8.926 2 1 1 0 556.9885 1588.9787 S335s TMT10 329 (K) ILTRGEsQVK (D) ILT(0.0)RGES(0.99)QVK K:TMT10,s:Phosphorylated S ARHGEF38 89988.8 1 3 2438.1 83.38 HUMAN 1 -13.0138 -0.3092 KINAGSNTPGSIRRY-p Q14D04;T422-p KINAGSNTPGSIRRY 0.742548538371495 0.157087038647883 -0.0543333333333333 -0.168333333333333 2.45530572683601 10.5716656696157 -0.0543333333333334 -0.168333333333333 0.568158393957018 0.087666452547676 -0.607428127857711 -2.08033132045155 Q14D04 VEPH1 Q14D04.T422.p_VEPH1 Q14D04_T422t _1_1_422_422 Q14D04 Q14D04|Q14D04-2 Ventricular zone-expressed PH domain-containing protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9605.9605.2 15.43 10.57 2.012 3 1 1 0 748.38 1415.7804 T422t TMT10 416 (K) INAGSNtPGSIR (R) INAGS(0.0)NT(0.99)PGS(0.0)IR t:Phosphorylated T VEPH1 95542.4 6 5 341.1 353.64 HUMAN 1 -2.4553 -10.5717 KINLKDDSPRSSTVS-p A0JNW5;S1327-p KINLKDDSPRSSTVS 0.797534996239426 0.44378231619079 0.054 -0.113 1.89562699770376 4.69853632773123 0.054 -0.113 0.646304679251116 0.338958373657328 0.485561787044312 -1.04831079235374 A0JNW5 UHRF1BP1L A0JNW5.S1327.p_UHRF1BP1L A0JNW5_S1327s _1_1_1327_1327 A0JNW5 A0JNW5|A0A0C4DGH6 UHRF1-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12319.12319.3 7.57 3.8 99 1 1 1 0 532.6228 1515.8895 S1327s TMT10 1321 (K) INLKDDsPR (S) INLKDDS(1.0)PR K:TMT10,s:Phosphorylated S UHRF1BP1L 165621.9 1 16 398.1 328.88 HUMAN 1 1.8956 -4.6985 KINLLKRSLLSIPNT-p O75569;S232-p KINLLKRSLLSIPNT 0.844721485137782 0.109966195871467 0.037 0.180333333333333 1.41518225380868 12.6619816028302 0.037 0.180333333333333 0.721907867083879 0.0541753642151743 0.375007855077904 2.44903035087074 O75569 PRKRA O75569.S232.p_PRKRA O75569_S232s _1_1_232_232 O75569 O75569|O75569-2|O75569-3 Interferon-inducible double-stranded RNA-dependent protein kinase activator A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.37404.37404.3 17.43 17.43 1.181 5 1 1 0 809.7705 2347.3322 S232s Hydrogen 232 (R) sLLSIPNTDYIQLLSEIAK (E) S(0.99)LLS(0.0)IPNT(0.0)DY(0.0)IQLLS(0.0)EIAK K:TMT10-Lys-Only,s:Phosphorylated S PRKRA 34860 3 3 2945.1 65.23 HUMAN 1 1.4152 12.662 KINSAPSSPIKTNKA-p A0AVK6;S417-p KINSAPSSPIKTNKA 0.113798805771488 0.00404124447761282 0.405333333333333 -0.607666666666667 19.6805852912366 35.2721263960099 0.405333333333333 -0.607666666666667 0.0107632015003148 0.00029702113984497 3.81073338769955 -8.19493422449698 A0AVK6 E2F8 A0AVK6.S417.p_E2F8 A0AVK6_S416sS417s_2_2_416_417 A0AVK6 A0AVK6 Transcription factor E2F8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13272.13272.3 8.87 6.57 2.749 3 2 2 0 663.6979 1829.1463 S416s S417s TMT10 410 (R) KINSAPssPIK (T) KINS(0.0)APS(0.99)S(0.99)PIK K:TMT10,s:Phosphorylated S E2F8 94792 6 8 1788.1 114.89 HUMAN 1 19.6806 -35.2721 KIPATQKS_______-p O75506;S76-p KIPATQKS_______ 0.96776831271533 0.997494453552868 -0.00666666666666668 0.000333333333333371 0.277111304526872 0.0157777648152557 -0.00666666666666667 0.00033333333333337 0.938185830657607 0.996373626625159 -0.0812209084209625 0.00475827375862604 O75506 HSBP1 O75506.S76.p_HSBP1 O75506_S76s_1_1_76_76 O75506 O75506 Heat shock factor-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31107.31107.5 9.29 7.68 0.202 4 1 1 0 720.981 3503.887 M56m N68n S76s TMT10 51 (K) NIADLmTQAGVEELESEnKIPATQKs (-) N(0.50)IADLM(1.0)T(0.0)QAGVEELES(0.0)EN(0.50)KIPAT(0.0)QKS(0.99) K:TMT10,m:Oxidized methionine,n:Deamidated,s:Phosphorylated S HSBP1 8543.4 5 2 4974.1 24.4 HUMAN 1 -0.2771 0.0158 KIPKGHGSPISRKNS-p Q9UJN7;S83-p KIPKGHGSPISRKNS 0.651789181792143 0.194735073510352 0.0693333333333333 -0.131333333333333 3.48462463253473 9.34167323065703 0.0693333333333333 -0.131333333333333 0.448267792803784 0.116367760644852 0.817237480978487 -1.86682629448295 Q9UJN7 ZNF391 Q9UJN7.S83.p_ZNF391 Q9UJN7_S83s _1_1_83_83 Q9UJN7 Q9UJN7 Zinc finger protein 391 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4234.4234.3 9.46 9.46 9.458 2 1 1 0 492.9417 1396.8425 S83s TMT10 80 (K) GHGsPISRK (N) GHGS(0.99)PIS(0.0)RK K:TMT10,s:Phosphorylated S ZNF391 41856.7 2 40 394.6 330.8 HUMAN 1 3.4846 -9.3417 KIPRGPPSPPAPVMH-p Q13573;S224-p KIPRGPPSPPAPVMH 0.343551676988823 0.865182979819933 0.133 -0.0183333333333333 8.61893724715021 0.885978737994393 0.133 -0.0183333333333333 0.137437825506431 0.815458992340998 1.7423992311884 -0.245003882745642 Q13573 SNW1 Q13573.S224.p_SNW1 Q13573_S224s _1_1_224_224 Q13573 G3V3A4|Q13573|G3V4X8 SNW domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10529.10734.3 21.41 17.95 17.269 3 1 1 0 608.3003 1742.9209 S224s TMT10 221 (R) GPPsPPAPVMHSPSR (K) GPPS(0.99)PPAPVMHS(0.0)PS(0.0)R s:Phosphorylated S SNW1 61550.4 18 4 936.1 198.57 HUMAN 1 8.6189 -0.886 KIPSAVSTVSMQNIH-p P19634;T603-p KIPSAVSTVSMQNIH 0.893124510936072 0.328137084282773 0.0246666666666667 0.0973333333333333 0.960610908854431 6.40821167306265 0.0246666666666666 0.0973333333333334 0.801565301700997 0.228654015532513 0.263968694088725 1.35662832066506 P19634 SLC9A1 P19634.T603.p_SLC9A1 P19634_S602sT603t_2_2_602_603 P19634 P19634 Sodium/hydrogen exchanger 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26178.26178.5 13.77 10.11 1.174 5 2 2 0 775.2031 3696.0432 S602s T603t M606m TMT10 584 (K) QAIELVESGGMGKIPSAVstVSmQNIHPK (S) Q(0.0)AIELVES(0.0)GGM(0.0)GKIPS(0.0)AVS(0.99)T(0.99)VS(0.0)M(0.99)QN(0.0)IHPK K:TMT10,s:Phosphorylated S,t:Phosphorylated T,m:Oxidized methionine SLC9A1 91274.8 17 10 732.1 235.73 HUMAN 1 0.9606 6.4082 KIPSLGWSPSKHTKT-p Q8IVF2;S593-p KIPSLGWSPSKHTKT 0.140760843773736 0.00114422820507021 -0.295 -1.072 17.4159727195573 48.7506501721175 -0.295 -1.072 0.0181302055556792 1.3333218087297e-05 -3.3450186322724 -14.8655070810892 Q8IVF2 AHNAK2 Q8IVF2.S593.p_AHNAK2 Q8IVF2_S593s _1_1_593_593 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27503.27711.3 14.47 14.47 2.091 3 1 1 0 705.4057 2034.2355 S593s TMT10 585 (K) FKIPSLGWsPSK (H) FKIPS(0.0)LGWS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S AHNAK2 617759.6 8 7 237.1 418.35 HUMAN 1 -17.416 -48.7507 KIPSVEDSLGEGSRD-p Q9C0C2;S1008-p KIPSVEDSLGEGSRD 0.851133444288753 0.276469866853052 0.034 -0.191 1.35430772402496 7.35728592522438 0.034 -0.191 0.732098012104395 0.183768642614214 0.360534516673766 -1.52297807223168 Q9C0C2 TNKS1BP1 Q9C0C2.S1008.p_TNKS1BP1 Q9C0C2_S1008s _1_1_1008_1008 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13890.13890.3 16.18 16.18 3.517 3 1 1 0 671.3534 1932.0802 S1008s TMT10 1001 (K) KIPSVEDsLGEGSR (D) KIPS(0.0)VEDS(0.99)LGEGS(0.0)R K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 3 41 4.1 2105.7 HUMAN 1 1.3543 -7.3573 KIQCAEPSPALLVPS-p O15417;S2292-p KIQCAEPSPALLVPS 0.288484631836158 0.016171548826071 -0.186 -0.373666666666667 10.1812045365361 24.7327473162862 -0.186 -0.373666666666667 0.0959134574055801 0.00336298761845589 -2.01321020612803 -4.97028950727354 O15417 TNRC18 O15417.S2292.p_TNRC18 O15417_S2292s _1_1_2292_2292 O15417 O15417|H9KVB4 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24058.24058.3 8.12 7.01 8.12 2 1 1 0 740.4027 2139.2248 S2292s TMT10 2286 (K) IQCAEPsPALLVPSAK (R) IQCAEPS(0.99)PALLVPS(0.0)AK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNRC18 316168 1 24 75.1 647.68 HUMAN 1 -10.1812 -24.7327 KIQDAALSCERLLEL-p E7ESJ3;S750-p KIQDAALSCERLLEL 0.496630998511602 0.085377672800039 0.0926666666666667 0.192666666666667 5.59777272033089 14.1444223798369 0.0926666666666667 0.192666666666667 0.275564157205815 0.0385086028468443 1.21256309542757 2.71782261175433 E7ESJ3 NotFound E7ESJ3.S750.p_NotFound E7ESJ3_S750s _1_1_750_750 E7ESJ3 E7ESJ3 Ankyrin repeat domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11557.11557.2 10.44 4.69 99 1 1 1 0 736.3444 1391.715 S750s TMT10 744 (K) IQDAALsCER (L) IQDAALS(1.0)CER C:Carbamidomethylation,s:Phosphorylated S ANKRD26 199524.4 1 10 812.1 221.02 HUMAN 1 5.5978 14.1444 KIQIAPDSGGLPERS-p Q96AE4;S140-p KIQIAPDSGGLPERS 0.872036099278236 0.948666999230927 0.0283333333333333 -0.00766666666666664 1.16459001253781 0.327573762406263 0.0283333333333333 -0.00766666666666665 0.764787883379535 0.927347752504692 0.314669364959241 -0.0955003506766968 Q96AE4 FUBP1 Q96AE4.S140.p_FUBP1 Q96AE4_S140s _1_1_140_140 Q96AE4 E9PEB5|Q96AE4-2 Far upstream element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18293.18293.3 13.11 10.29 99 1 1 1 0 554.6199 1581.8798 S140s TMT10 134 (K) IQIAPDsGGLPER (S) IQIAPDS(1.0)GGLPER s:Phosphorylated S FUBP1 67730.3 4 5 1157.1 171.64 HUMAN 1 1.1646 -0.3276 KIQNTGDYYDLYGGE-p Q06124;Y62-p KIQNTGDYYDLYGGE 0.303082902073058 0.00800958311249346 -0.295666666666667 0.491 9.7149891850769 29.8772986343146 -0.295666666666667 0.491 0.106782745166968 0.00102865593595883 -1.93223410449345 6.38481222684503 Q06124 PTPN11 Q06124.Y62.p_PTPN11 Q06124_Y62y _1_1_62_62 Q06124 Q06124|Q06124-2|Q06124-3|A0A1W2PPU4 Tyrosine-protein phosphatase non-receptor type 11 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.22470.22700.3 26.48 19.74 3.988 4 1 1 0 758.6966 2194.1068 Y62y TMT10 56 (K) IQNTGDyYDLYGGEK (F) IQNT(0.0)GDY(0.99)Y(0.0)DLY(0.0)GGEK K:TMT10,y:Phosphorylated Y PTPN11 69005.6 4 1 19.1 80.27 HUMAN 1 -9.715 29.8773 KIQPDSHSLSYGTLP-p Q9H841-2;S360-p KIQPDSHSLSYGTLP 0.18692158281326 0.044383200816418 -0.236333333333333 -0.25 14.3188861949382 18.111549812662 -0.236333333333333 -0.25 0.0369923039222647 0.0154470310220027 -2.75165682646187 -3.48200315601336 Q9H841 NIPAL2 Q9H841.2.S360.p_NIPAL2 Q9H841-2_S360s _1_1_360_360 Q9H841-2 Q9H841-2 Isoform 2 of NIPA-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16755.16755.3 21.44 21.44 1.178 8 1 1 0 915.1121 2663.3565 S360s TMT10 354 (K) IQPDSHsLSYGTLPDGSDSTK (S) IQPDS(0.0)HS(0.99)LS(0.0)Y(0.0)GT(0.0)LPDGS(0.0)DS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S NIPAL2 42382.9 2 2 4496.1 30.69 HUMAN 1 -14.3189 -18.1115 KIREKADSIERRHKK-p O15020;S1255-p KIREKADSIERRHKK 0.201694340984261 0.00333043685977549 0.425 -0.845333333333333 13.5056952740454 37.0800818221129 0.425 -0.845333333333333 0.0446098201769289 0.00019588077687543 2.60260230251529 -8.89245840217246 O15020 SPTBN2 O15020.S1255.p_SPTBN2 O15020_S1255s _1_1_1255_1255 O15020 O15020|O15020-2 Spectrin beta chain, non-erythrocytic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5727.5727.3 8.7 2.21 99 1 1 1 0 495.9291 1405.8051 S1255s TMT10 1251 (R) EKADsIER (R) EKADS(1.0)IER K:TMT10,s:Phosphorylated S SPTBN2 272689.3 9 6 781.1 225.92 HUMAN 1 13.5057 -37.0801 KIRRLSLSPKKNKAS-p Q5FBB7;S461-p KIRRLSLSPKKNKAS 0.188546819611632 0.00408480498789305 0.383 -1.45133333333333 14.2187338647551 35.1792614919661 0.383 -1.45133333333333 0.0378552931352415 0.000303440713445799 2.7331675156654 -8.16044071877102 Q5FBB7 SGOL1 Q5FBB7.S461.p_SGOL1 Q5FBB7_S461s _1_1_461_461 Q5FBB7 P54132|H0YNU5|H0YLV8|Q5FBB7|Q5FBB7-6|Q5FBB7-2|Q5FBB7-3|Q5FBB7-4|Q5FBB7-5 Shugoshin 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15497.15497.3 8.74 8.74 2.114 2 1 1 0 513.9878 1459.9815 S461s TMT10 458 (R) LSLsPKK (N) LS(0.0)LS(0.99)PKK K:TMT10,s:Phosphorylated S SGO1 65044.6 4 18 1140.1 173.27 HUMAN 1 14.2187 -35.1793 KIRSKKLSVLIHNSD-p Q9NTJ3;S143-p KIRSKKLSVLIHNSD 0.0593125796096809 0.0243628364842804 -0.599 0.458 26.820674847886 21.9798887769732 -0.599 0.458 0.00207937354924815 0.00633885944898753 -5.52017522466652 4.31277664781298 Q9NTJ3 SMC4 Q9NTJ3.S143.p_SMC4 Q9NTJ3_S143s _1_1_143_143 Q9NTJ3 Q9NTJ3|E9PD53|Q9NTJ3-2 Structural maintenance of chromosomes protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14920.14920.4 16.02 16.02 2.78 2 1 1 0 572.5753 2207.3115 S143s TMT10 141 (K) KLsVLIHNSDEHK (D) KLS(0.99)VLIHNS(0.0)DEHK K:TMT10,s:Phosphorylated S SMC4 147864 1 3 902.1 203.59 HUMAN 1 -26.8207 21.9799 KIRTKTQSFCRNEYS-p Q9BXY0;S27-p KIRTKTQSFCRNEYS 0.117217094144704 0.00246432253845191 -0.397666666666667 -0.778 19.381514922573 39.9677639947303 -0.397666666666667 -0.778 0.0115305097602397 0.000100745023040741 -3.74745604081386 -10.1168715121903 Q9BXY0 MAK16 Q9BXY0.S27.p_MAK16 Q9BXY0_S27s _1_1_27_27 Q9BXY0 Q9BXY0 Protein MAK16 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16639.16639.3 14.66 14.66 1.102 5 1 1 0 805.6985 2335.1121 S27s TMT10 25 (K) TQsFCRNEYSLTGLCNR (S) T(0.0)QS(0.99)FCRNEY(0.0)S(0.0)LT(0.0)GLCNR C:Carbamidomethylation,s:Phosphorylated S MAK16 35710.3 1 1 5255.1 21.29 HUMAN 1 -19.3815 -39.9678 KISAMDASPRNISPG-p Q9Y2I7;S1544-p KISAMDASPRNISPG 0.132277812902063 0.0373113671420933 -0.310333333333333 -0.397333333333333 18.1292109748 19.1924054713335 -0.310333333333333 -0.397333333333333 0.0153843411726558 0.0120436867958015 -3.48846242433028 -3.70444623628191 Q9Y2I7 PIKFYVE Q9Y2I7.S1544.p_PIKFYVE Q9Y2I7_S1544s _1_1_1544_1544 Q9Y2I7 Q9Y2I7 1-phosphatidylinositol 3-phosphate 5-kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11032.11032.2 10.61 5.92 5.297 2 1 1 0 628.8001 1176.6244 S1544s TMT10 1538 (K) ISAMDAsPR (N) IS(0.0)AMDAS(0.99)PR s:Phosphorylated S PIKFYVE 239756.4 2 9 1398.1 146.55 HUMAN 1 -18.1292 -19.1924 KISATEDTPEAEGEV-p A0A1B0GUA3;T317-p KISATEDTPEAEGEV 0.334991410736759 0.978061770787869 0.148 0.00533333333333337 8.86205742023604 0.138289531297172 0.148 0.00533333333333339 0.129955378350044 0.968659287577914 1.78448460110747 0.0411366456175806 A0A1B0GUA3 NotFound A0A1B0GUA3.T317.p_NotFound A0A1B0GUA3_T317t _1_1_317_317 A0A1B0GUA3 A0A1B0GUA3|Q96EK5 KIF1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17113.17113.3 18.99 18.99 3.125 4 1 1 0 894.0847 2600.2678 T317t TMT10 311 (K) ISATEDtPEAEGEVPELYHQR (K) IS(0.0)AT(0.0)EDT(0.99)PEAEGEVPELY(0.0)HQR t:Phosphorylated T KIF1BP 75466.9 1 2 2127.1 96.61 HUMAN 1 8.8621 0.1383 KISEGLPTPTKMTPR-p P06400;T821-p KISEGLPTPTKMTPR 0.10854647135141 0.00145656205878136 -0.319333333333333 -1.05566666666667 20.2359512547962 45.7494218411642 -0.319333333333333 -1.05566666666667 0.00947119709880204 2.66107929503939e-05 -3.92977201953075 -13.046355033406 P06400 RB1 P06400.T821.p_RB1 P06400_T821t _1_1_821_821 P06400 P06400 Retinoblastoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17013.17013.3 10.73 10.73 4.01 3 1 1 0 527.6295 1500.9038 T821t TMT10 815 (K) ISEGLPtPTK (M) IS(0.0)EGLPT(0.99)PT(0.0)K K:TMT10,t:Phosphorylated T RB1 107013.3 8 10 155.1 502.88 HUMAN 1 -20.236 -45.7494 KISENSYSLDDLEIG-p Q9UHB6-4;S230-p KISENSYSLDDLEIG 0.994167574639875 0.624349459225092 0.002 0.059 0.0510040905831606 2.78218592473867 0.00199999999999998 0.059 0.988324567204 0.526964558764163 0.0153217259305807 0.67572263635946 Q9UHB6 LIMA1 Q9UHB6.4.S230.p_LIMA1 Q9UHB6-4_S230s _1_1_230_230 Q9UHB6-4 Q9UHB6-4|Q9UHB6-5|Q9UHB6-2|F8VQE1|F8VRN8 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.29835.29835.4 20.04 20.04 1.829 9 1 1 0 864.9129 3376.6684 S230s TMT10 224 (K) ISENSYsLDDLEIGPGQLSSSTFDSEK (N) IS(0.0)ENS(0.0)Y(0.0)S(0.99)LDDLEIGPGQLS(0.0)S(0.0)S(0.0)T(0.0)FDS(0.0)EK K:TMT10,s:Phosphorylated S LIMA1 85678.4 3 11 42.1 822.82 HUMAN 1 0.051 2.7822 KISKLGRSFTRARDY-p Q9Y230;S208-p KISKLGRSFTRARDY 0.163265534069753 0.140613860518455 -0.237 0.238666666666667 15.7724442597621 11.2275798533491 -0.237 0.238666666666667 0.0264700995136849 0.0753775495167599 -3.02461811673932 2.19501504090217 Q9Y230 RUVBL2 Q9Y230.S208.p_RUVBL2 Q9Y230_S208s _1_1_208_208 Q9Y230 Q9Y230 RuvB-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8097.8097.3 10.6 10.6 1.854 2 1 1 0 382.5394 1065.6366 S208s TMT10 205 (K) LGRsFTR (A) LGRS(0.99)FT(0.0)R s:Phosphorylated S RUVBL2 51326.8 1 2 1680.1 121.4 HUMAN 1 -15.7724 11.2276 KISLDNLSEDGAQLL-p Q8NEZ4-3;S1387-p KISLDNLSEDGAQLL 0.79813572883131 0.0962287444953519 0.045 0.18 1.88759731903668 13.4423715026094 0.045 0.18 0.647500738519177 0.045265033877022 0.483763222515876 2.58961482128868 Q8NEZ4 KMT2C Q8NEZ4.3.S1387.p_KMT2C Q8NEZ4-3_S1387s _1_1_1387_1387 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.31128.31128.3 12.62 12.62 3.482 3 1 1 0 773.0736 2237.2429 S1387s TMT10 1381 (K) ISLDNLsEDGAQLLYK (T) IS(0.0)LDNLS(0.99)EDGAQLLY(0.0)K K:TMT10,s:Phosphorylated S KMT2C 554869.1 1 10 88.1 626.31 HUMAN 1 1.8876 13.4424 KISQRDPSPESNKKG-p Q8NDX5-7;S275-p KISQRDPSPESNKKG 0.169093239694889 0.0053237869004172 -0.275333333333333 0.514333333333333 15.3966801433085 33.0213953912589 -0.275333333333333 0.514333333333333 0.0288623697248849 0.000498724221267598 -2.95318526639988 7.39342952912233 Q8NDX5 PHC3 Q8NDX5.7.S275.p_PHC3 Q8NDX5-7_S275s _1_1_275_275 Q8NDX5-7 Q8NDX5-7|Q8NDX5-2|E7EX82|Q8NDX5-3 Isoform 7 of Polyhomeotic-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7034.7034.4 15.7 15.7 11.569 5 1 1 0 621.3116 2402.2564 S275s Hydrogen 273 (R) DPsPESNKKGESPSLESR (S) DPS(0.99)PES(0.0)NKKGES(0.0)PS(0.0)LES(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S PHC3 108276.8 16 4 439.1 312.22 HUMAN 1 -15.3967 33.0214 KISRPGDSDDSRSVN-p P14866;S185-p KISRPGDSDDSRSVN 0.274136646553826 0.141446356768383 -0.446666666666667 0.432 10.6441593188882 11.1925133079264 -0.446666666666667 0.432 0.0862152452835308 0.0759886395406823 -2.09387963865284 2.18886410561117 P14866 HNRNPL P14866.S185.p_HNRNPL P14866_S185s _1_1_185_185 P14866 P14866|P14866-2|B4DVF8 Heterogeneous nuclear ribonucleoprotein L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4814.4814.2 12.47 2.73 1.338 3 1 1 0 757.3462 1433.7182 S185s TMT10 179 (K) ISRPGDsDDSR (S) IS(0.0)RPGDS(0.99)DDS(0.0)R s:Phosphorylated S HNRNPL 64759.2 2 3 846.1 213.74 HUMAN 1 -10.6442 11.1925 KISVGRLSPQQESSA-p P15822;S1735-p KISVGRLSPQQESSA 0.17801215785102 0.218815395072178 -0.213 -0.136666666666667 14.8220055446787 8.68551345473282 -0.213 -0.136666666666667 0.0329457535619466 0.135347006407165 -2.84513435076405 -1.75331786993113 P15822 HIVEP1 P15822.S1735.p_HIVEP1 P15822_S1735s _1_1_1735_1735 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13641.13641.3 16.29 10.76 1.196 6 1 1 0 767.072 2219.2396 S1735s TMT10 1729 (K) ISVGRLsPQQESSASSK (R) IS(0.0)VGRLS(0.99)PQQES(0.0)S(0.0)AS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S HIVEP1 299483.8 3 24 82.1 631.69 HUMAN 1 -14.822 -8.6855 KITDFGHSKILGETS-p O96017-9;S415-p KITDFGHSKILGETS 0.935158220570074 0.0284577747423927 -0.0133333333333333 0.281333333333333 0.570738371028681 20.9389813242923 -0.0133333333333333 0.281333333333333 0.876851729460136 0.00805567371916248 -0.162441816841925 4.07937870568836 O96017 CHEK2 O96017.9.S415.p_CHEK2 O96017-9_S415s _1_1_415_415 O96017-9 O96017-9|O96017-4|O96017-13 Isoform 9 of Serine/threonine-protein kinase Chk2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12512.12512.3 11.7 11.7 4.589 2 1 1 0 481.5869 1362.7782 S415s TMT10 409 (K) ITDFGHsK (I) IT(0.0)DFGHS(0.99)K K:TMT10,s:Phosphorylated S CHEK2 66216.4 1 4 745.1 233.29 HUMAN 1 -0.5707 20.939 KITLDNAYMEKCDEN-p P14618;Y148-p KITLDNAYMEKCDEN 0.0894330602667362 0.325986444824017 -0.373666666666667 -0.106333333333333 22.3201126527858 6.44273908938988 -0.373666666666667 -0.106333333333333 0.00586122960719497 0.226843370256872 -4.39551728370618 -1.36272293171774 P14618 PKM P14618.Y148.p_PKM P14618_Y148y _1_1_148_148 P14618 P14618|P14618-2|P14618-3 Pyruvate kinase PKM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19842.19842.3 16.04 16.04 16.042 2 1 1 0 579.2969 1655.9079 Y148y TMT10 142 (K) ITLDNAyMEK (C) IT(0.0)LDNAY(0.99)MEK K:TMT10,y:Phosphorylated Y PKM 58506.4 1 8 502.1 291.2 HUMAN 1 -22.3201 -6.4427 KITSLSSSLDTSLDF-p Q9P2Y5;S550-p KITSLSSSLDTSLDF 0.10503732738293 0.18527149006028 -0.321 -0.202 20.6015691839881 9.62815677911951 -0.321 -0.202 0.0087064895200897 0.108939235218348 -4.0092595709622 -1.91643187489097 Q9P2Y5 UVRAG Q9P2Y5.S550.p_UVRAG Q9P2Y5_S550s _1_1_550_550 Q9P2Y5 Q9P2Y5|E9PR71|Q9P2Y5-2 UV radiation resistance-associated gene protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24013.24219.3 13.63 13.63 1.211 8 1 1 0 866.1421 2516.4426 S550s TMT10 543 (R) KITSLSSsLDTSLDFSK (E) KIT(0.0)S(0.0)LS(0.0)S(0.0)S(0.99)LDT(0.0)S(0.0)LDFS(0.0)K K:TMT10,s:Phosphorylated S UVRAG 78948.1 12 5 797.1 223.6 HUMAN 1 -20.6016 -9.6282 KITVHKISPQHRARK-p Q96LZ7;S121-p KITVHKISPQHRARK 0.200655579876407 0.363754976344629 -0.222333333333333 0.0863333333333334 13.5611621015596 5.82207122025531 -0.222333333333333 0.0863333333333334 0.044043699394476 0.261693465232411 -2.61269407903122 1.25251169987164 Q96LZ7 RMDN2 Q96LZ7.S121.p_RMDN2 Q96LZ7_S121s _1_1_121_121 Q96LZ7 Q96LZ7|F8WFC3 Regulator of microtubule dynamics protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7618.7618.4 14.56 8.87 6.881 2 1 1 0 464.2691 1774.0852 S121s TMT10 115 (K) ITVHKIsPQHR (A) IT(0.0)VHKIS(0.99)PQHR K:TMT10,s:Phosphorylated S RMDN2 47740.8 2 1 5429.1 19.42 HUMAN 1 -13.5612 5.8221 KIVAERDSIRTLCDN-p Q8TDM6;S539-p KIVAERDSIRTLCDN 0.153398497348319 0.184522173394006 -0.272666666666667 -0.164 16.3638022681758 9.64862779096102 -0.272666666666667 -0.164 0.0231004145266131 0.108426944872363 -3.1383594991033 -1.91997852847937 Q8TDM6 DLG5 Q8TDM6.S539.p_DLG5 Q8TDM6_S539s _1_1_539_539 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8329.8329.3 8.47 8.47 99 1 1 1 0 456.5817 1287.7582 S539s TMT10 533 (K) IVAERDsIR (T) IVAERDS(1.0)IR s:Phosphorylated S DLG5 215575.4 1 6 34.1 890.58 HUMAN 1 -16.3638 -9.6486 KIVAPTVSQINAEFV-p O60306;S16-p KIVAPTVSQINAEFV 0.699189099199276 0.106433706683414 0.0563333333333333 0.183 2.9203696946024 12.8521089181285 0.0563333333333334 0.183 0.510461544919404 0.0518548172684141 0.704191553005429 2.48310769256128 O60306 AQR O60306.S16.p_AQR O60306_S16s _1_1_16_16 O60306 O60306|H0YH15 Intron-binding protein aquarius HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36521.36521.3 16.1 16.1 2.756 3 1 1 0 909.8222 2647.4893 S16s TMT10 10 (K) IVAPTVsQINAEFVTQLACK (Y) IVAPT(0.0)VS(0.99)QINAEFVT(0.0)QLACK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AQR 172376.2 1 1 4471.1 30.94 HUMAN 1 2.9204 12.8521 KIVHRYYSLDELSEK-p Q9BRF8;S294-p KIVHRYYSLDELSEK 0.114899542396996 0.136843685500911 -0.450666666666667 0.342666666666667 19.5592062091502 11.3832003797779 -0.450666666666667 0.342666666666667 0.0110682606794709 0.0727243690476773 -3.78498336509127 2.22234175940919 Q9BRF8 CPPED1 Q9BRF8.S294.p_CPPED1 Q9BRF8_S294s _1_1_294_294 Q9BRF8 Q9BRF8|Q9BRF8-2 Serine/threonine-protein phosphatase CPPED1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22203.22203.2 12.83 7.14 4.769 4 1 1 0 892.9426 1704.9096 S294s TMT10 292 (R) YYsLDELSEK (G) Y(0.0)Y(0.0)S(0.99)LDELS(0.0)EK K:TMT10,s:Phosphorylated S CPPED1 35889.9 2 2 4918.1 25.07 HUMAN 1 -19.5592 11.3832 KIVPASFSCEAAQTK-p Q8TF40;S743-p KIVPASFSCEAAQTK 0.0519525792237636 0.00604775327324358 -1.06766666666667 -1.00433333333333 28.0770591028843 32.0302882039267 -1.06766666666667 -1.00433333333333 0.00155701963636768 0.000626572283074645 -5.86773962592408 -7.06222609399461 Q8TF40 FNIP1 Q8TF40.S743.p_FNIP1 Q8TF40_S743s _1_1_743_743 Q8TF40 Q8TF40 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21231.21231.3 13.71 13.71 2.792 3 1 1 0 683.0164 1967.0672 S743s TMT10 737 (K) IVPASFsCEAAQTK (V) IVPAS(0.0)FS(0.99)CEAAQT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FNIP1 132549.9 1 18 310.1 372.19 HUMAN 1 -28.0771 -32.0303 KIVTDSDSKTEELRF-p Q9H2G2;S818-p KIVTDSDSKTEELRF 0.16550315241392 0.640790927458055 0.244666666666667 -0.0943333333333333 15.6292297107957 2.63262324836464 0.244666666666667 -0.0943333333333333 0.0273575391203201 0.545428309097324 2.99731789693928 -0.644668101917744 Q9H2G2 SLK Q9H2G2.S818.p_SLK Q9H2G2_S818s _1_1_818_818 Q9H2G2 Q9H2G2|Q9H2G2-2 STE20-like serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13557.13557.2 14.2 8.17 1.163 4 1 1 0 1016.0248 1951.0748 S818s TMT10 812 (K) IVTDSDsKTEELR (F) IVT(0.0)DS(0.0)DS(0.99)KT(0.0)EELR K:TMT10,s:Phosphorylated S SLK 143320 1 16 329.1 359.67 HUMAN 1 15.6292 -2.6326 KIWHHTFYNELRVAP-p P63261;Y91-p KIWHHTFYNELRVAP 0.932529016666144 0.0170012495199144 0.0203333333333333 0.435 0.598145016838345 24.412394390852 0.0203333333333333 0.435 0.871335680311179 0.00362043338438561 0.169799237140037 4.89055946690067 P63261 ACTG1 P63261.Y91.p_ACTG1 P63261_Y91y _1_1_91_91 P63261 P63261|Q9BYX7|A6NL76|J3KT65|G5E9R0 Actin, cytoplasmic 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16802.16843.3 12.45 12.45 2.577 2 1 1 0 608.963 1744.9121 Y91y TMT10 85 (K) IWHHTFyNELR (V) IWHHT(0.0)FY(0.99)NELR y:Phosphorylated Y ACTG1 42134.4 1 3 1.1 138.33 HUMAN 1 0.5981 24.4124 KIWSLAETATSPDNP-p P78415;T355-p KIWSLAETATSPDNP 0.527370205367512 0.0546957890003969 -0.0933333333333333 0.289 5.13997237137659 16.8207325420703 -0.0933333333333334 0.289 0.306198291312393 0.0207934592583389 -1.12964798934483 3.22498435696563 P78415 IRX3 P78415.T355.p_IRX3 P78415_S351sT355t_2_2_351_355 P78415 P78415 Iroquois-class homeodomain protein IRX-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26603.26603.5 16.21 12.34 1.191 8 2 2 0 992.8941 4800.5131 S351s T355t TMT10 349 (K) IWsLAEtATSPDNPRRSPPGAGGSPPGAAVAPSALQLSPAAAAAAAHR (L) IWS(0.99)LAET(0.99)AT(0.0)S(0.0)PDNPRRS(0.0)PPGAGGS(0.0)PPGAAVAPS(0.0)ALQLS(0.0)PAAAAAAAHR s:Phosphorylated S,t:Phosphorylated T IRX3 52232 5 5 2172.1 94.55 HUMAN 1 -5.14 16.8207 KIWSTVPTDEEDEME-p Q9GZL7;T221-p KIWSTVPTDEEDEME 0.72251740159762 0.0685469627110632 0.0516666666666667 0.220666666666667 2.67108334893079 15.4849856671226 0.0516666666666667 0.220666666666667 0.54061944843511 0.0282814344466054 0.652775466289171 2.9679012528601 Q9GZL7 WDR12 Q9GZL7.T221.p_WDR12 Q9GZL7_T221t _1_1_221_221 Q9GZL7 Q9GZL7 Ribosome biogenesis protein WDR12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19441.19441.3 20.14 19.58 4.181 5 1 1 0 944.0874 2750.2777 T221t TMT10 215 (K) IWSTVPtDEEDEMEESTNRPR (K) IWS(0.0)T(0.0)VPT(0.99)DEEDEMEES(0.0)T(0.0)NRPR t:Phosphorylated T WDR12 48220.6 1 1 5356.1 20.14 HUMAN 1 2.6711 15.485 KIYEFPETDDEEENK-p E7EPK1;T228-p KIYEFPETDDEEENK 0.211892667812601 0.146407799253294 0.212333333333333 -0.156 13.0101433909331 10.9902883103045 0.212333333333333 -0.156 0.0500018025618033 0.0796106498415887 2.5128948681312 -2.15343816214933 E7EPK1 NotFound E7EPK1.T228.p_NotFound E7EPK1_T228t _1_1_228_228 E7EPK1 Q16181|E7EPK1|Q16181-2 Septin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22790.22790.4 18.44 15.92 6.943 2 1 1 0 717.1168 2785.4751 T228t TMT10 222 (K) IYEFPEtDDEEENKLVK (K) IY(0.0)EFPET(0.99)DDEEENKLVK K:TMT10,t:Phosphorylated T SEPT7 50979.3 8 2 1055.1 182.7 HUMAN 1 13.0101 -10.9903 KIYESVLTPPPLGAP-p Q9UMN6;T667-p KIYESVLTPPPLGAP 0.278970775596523 0.642221827133025 0.192333333333333 0.0443333333333333 10.4802795560505 2.62038886627247 0.192333333333333 0.0443333333333333 0.0895307132631796 0.546966985404193 2.06528916692135 0.642111164085821 Q9UMN6 KMT2B Q9UMN6.T667.p_KMT2B Q9UMN6_T667t _1_1_667_667 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28104.28104.4 19.69 14.77 2.279 4 1 1 0 968.4664 3790.8901 T667t TMT10 661 (K) IYESVLtPPPLGAPEAPEPEPPPADDSPAEPEPR (A) IY(0.0)ES(0.0)VLT(0.99)PPPLGAPEAPEPEPPPADDS(0.0)PAEPEPR t:Phosphorylated T KMT2B 297845.7 1 6 388.1 332.76 HUMAN 1 10.4803 2.6204 KKAAGGATPKKSAKK-p P16403;T146-p KKAAGGATPKKSAKK 0.565856073226583 0.0262377057275732 0.107333333333333 -0.840333333333333 4.55709768560571 21.4919874656398 0.107333333333333 -0.840333333333334 0.350179107449967 0.00709253117558892 1.02223012330639 -4.20240433764273 P16403 HIST1H1C P16403.T146.p_HIST1H1C P16403_T146t _1_1_146_146 P16403 P16403 Histone H1.2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5953.5953.3 9.33 4.23 99 1 1 1 0 523.3111 1487.9513 T146t TMT10 141 (K) AAGGAtPKK (S) AAGGAT(1.0)PKK K:TMT10,t:Phosphorylated T HIST1H1C 21364.4 3 28 738.4 234.77 HUMAN 1 4.5571 -21.492 KKAALSASEGEEVPQ-p O95831;S118-p KKAALSASEGEEVPQ 0.916056654296661 0.0192334595369213 0.0163333333333333 0.331666666666667 0.745487594250236 23.5789773078943 0.0163333333333333 0.331666666666667 0.842269822201434 0.00438633976704519 0.208758901541851 4.68722502724731 O95831 AIFM1 O95831.S118.p_AIFM1 O95831_S118s _1_1_118_118 O95831 O95831|O95831-3 Apoptosis-inducing factor 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28884.28884.5 24.41 24.41 1.214 4 1 1 0 815.6277 3994.1438 S118s TMT10 113 (K) AALSAsEGEEVPQDKAPSHVPFLLIGGGTAAFAAAR (S) AALS(0.0)AS(0.99)EGEEVPQDKAPS(0.0)HVPFLLIGGGT(0.0)AAFAAAR K:TMT10,s:Phosphorylated S AIFM1 67184.7 3 2 1056.1 182.66 HUMAN 1 0.7455 23.579 KKAAVVVSKSGSLKK-p Q14978-3;S579-p KKAAVVVSKSGSLKK 0.416668444361649 0.0450582319936359 -0.115333333333333 -0.278333333333333 7.01738900014411 18.0185582384121 -0.115333333333333 -0.278333333333333 0.198728932642861 0.0157813508867801 -1.46405672278025 -3.4631831855415 Q14978 NOLC1 Q14978.3.S579.p_NOLC1 Q14978-3_S579s _1_1_579_579 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12640.12640.2 9.64 9.64 99 1 1 1 0 606.3613 1131.7502 S579s TMT10 574 (K) AAVVVsK (S) AAVVVS(1.0)K K:TMT10,s:Phosphorylated S NOLC1 73744 1 16 72.1 655.55 HUMAN 1 -7.0174 -18.0186 KKADRDQSPFSKIKQ-p Q13427;S687-p KKADRDQSPFSKIKQ 0.42523237572394 0.381936826381438 0.118333333333333 0.0973333333333333 6.84349081370762 5.55309225792316 0.118333333333333 0.0973333333333334 0.20684780593429 0.278413810433113 1.43358832860331 1.20425237344779 Q13427 PPIG Q13427.S687.p_PPIG Q13427_S687s _1_1_687_687 Q13427 Q13427|E9PG73 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8085.8085.3 13.08 8.21 3.842 2 1 1 0 563.6185 1608.8746 S687s TMT10 682 (K) ADRDQsPFSK (I) ADRDQS(0.99)PFS(0.0)K K:TMT10,s:Phosphorylated S PPIG 89129.1 25 15 112.1 571.91 HUMAN 1 6.8435 5.5531 KKAEAAASALADADA-p O43633;S203-p KKAEAAASALADADA 0.609113659815122 0.972347668669124 0.0683333333333333 -0.00566666666666666 3.9864560420794 0.171773680207243 0.0683333333333333 -0.00566666666666662 0.399350650135114 0.961219631344058 0.914539790486432 -0.0509106955880315 O43633 CHMP2A O43633.S203.p_CHMP2A O43633_S203s _1_1_203_203 O43633 O43633 Charged multivesicular body protein 2a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25233.25233.4 20.43 20.43 99 1 1 1 0 732.1461 2845.5874 S203s TMT10 197 (K) KAEAAAsALADADADLEERLK (N) KAEAAAS(1.0)ALADADADLEERLK K:TMT10,s:Phosphorylated S CHMP2A 25103.6 2 2 3787.1 43.07 HUMAN 1 3.9865 -0.1718 KKAEENASQEEEEAA-p Q9H4I2;S680-p KKAEENASQEEEEAA 0.729757185802638 0.0406447733136134 -0.108666666666667 0.490666666666667 2.5952010597865 18.6464224661794 -0.108666666666667 0.490666666666667 0.550148450398826 0.013657076854389 -0.636921582578285 3.59121678511047 Q9H4I2 ZHX3 Q9H4I2.S680.p_ZHX3 Q9H4I2_S680s _1_1_680_680 Q9H4I2 Q9H4I2-2 Zinc fingers and homeoboxes protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17074.17074.3 23.16 23.16 14.846 2 1 1 0 1201.5361 3522.6244 S680s TMT10 674 (K) KAEENAsQEEEEAAEDEGGEEDLASELR (V) KAEENAS(0.99)QEEEEAAEDEGGEEDLAS(0.0)ELR K:TMT10,s:Phosphorylated S ZHX3 105511.4 1 2 1737.1 118.49 HUMAN 1 -2.5952 18.6464 KKAKNENSPDTQRSK-p Q9HCS5;S402-p KKAKNENSPDTQRSK 0.0312726597227304 0.00539882296906826 0.620666666666667 0.558333333333333 35.1455723372871 32.9096453033299 0.620666666666667 0.558333333333333 0.000305803721489749 0.000511723627288164 8.16387222581462 7.35544496757868 Q9HCS5 EPB41L4A Q9HCS5.S402.p_EPB41L4A Q9HCS5_S402s _1_1_402_402 Q9HCS5 Q9HCS5 Band 4.1-like protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3454.3454.2 12.58 9.38 2.175 2 1 1 0 899.4492 1717.9233 S402s TMT10 397 (K) AKNENsPDTQR (S) AKNENS(0.99)PDT(0.0)QR K:TMT10,s:Phosphorylated S EPB41L4A 79741.9 4 3 696.1 241.4 HUMAN 1 35.1456 32.9096 KKAKNPKSPKVQAVK-p P38432;S202-p KKAKNPKSPKVQAVK 0.445972173170048 0.0523931863384115 -0.133666666666667 -1.10533333333333 6.46762921945293 17.084264289075 -0.133666666666667 -1.10533333333333 0.225547012013514 0.0195692224972842 -1.36746339937722 -3.27673751327634 P38432 COIL P38432.S202.p_COIL P38432_S202s _1_1_202_202 P38432 P38432 Coilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10011.10011.3 12.34 8.94 99 1 1 1 0 731.4492 2112.3675 S202s TMT10 199 (K) NPKsPKVQAVK (D) NPKS(1.0)PKVQAVK K:TMT10,s:Phosphorylated S COIL 63291.8 4 5 395.1 330.42 HUMAN 1 -6.4676 -17.0843 KKALSKASPNTRSGT-p Q14980;S2077-p KKALSKASPNTRSGT 0.135618030114172 0.00848160105761162 0.441666666666667 -0.569333333333333 17.7953467780785 29.403744954002 0.441666666666667 -0.569333333333333 0.0166136601471422 0.00114716398673427 3.42096526115064 -6.24310536825074 Q14980 NUMA1 Q14980.S2077.p_NUMA1 Q14980_S2077s _1_1_2077_2077 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6698.6698.2 12.08 6.78 2.127 3 1 1 0 791.9393 1502.9055 S2077s TMT10 2072 (K) ALSKAsPNTR (S) ALS(0.0)KAS(0.99)PNT(0.0)R K:TMT10,s:Phosphorylated S NUMA1 239339.3 4 37 31.1 900.97 HUMAN 1 17.7953 -29.4037 KKAQTNDSDSDTESK-p O14647;S1085-p KKAQTNDSDSDTESK 0.0715981735064038 0.0126876261348301 0.712333333333333 0.537 24.7396405582776 26.4427716337623 0.712333333333333 0.537 0.00335765402553749 0.00226841670385527 4.97813653412319 5.41144693255003 O14647 CHD2 O14647.S1085.p_CHD2 O14647_S1085sS1087s_2_2_1085_1087 O14647 O14647|O14647-2 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6126.6126.3 10.09 10.09 2.498 5 2 2 0 791.6956 2213.15 S1085s S1087s TMT10 1079 (K) KAQTNDsDsDTESK (R) KAQT(0.0)NDS(0.99)DS(0.99)DT(0.0)ES(0.0)K K:TMT10,s:Phosphorylated S CHD2 212309.6 4 15 482.1 298.11 HUMAN 1 24.7396 26.4428 KKARAAVSPQKRKSD-p G5E9I4;S237-p KKARAAVSPQKRKSD 0.187254795627764 0.00457608170970566 0.223666666666667 -0.693 14.283082037955 34.2445498662442 0.223666666666667 -0.693 0.037298536901572 0.000376309353630129 2.74504254055892 -7.8202054954383 G5E9I4 BRMS1 G5E9I4.S237.p_BRMS1 G5E9I4_S237s _1_1_237_237 G5E9I4 G5E9I4|Q9HCU9 Breast cancer metastasis suppressor 1, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7357.7357.2 9.92 9.92 99 1 1 1 0 619.8495 1158.7247 S237s TMT10 234 (R) AAVsPQK (R) AAVS(1.0)PQK K:TMT10,s:Phosphorylated S BRMS1 34056.6 6 3 3486.1 49.85 HUMAN 1 14.2831 -34.2445 KKARHQNSLPELEAA-p Q96BZ8;S59-p KKARHQNSLPELEAA 0.768850206674868 0.76172764838597 -0.0596666666666667 -0.0316666666666666 2.1901520405896 1.63322819027133 -0.0596666666666667 -0.0316666666666666 0.603927486326626 0.686557919246642 -0.550512592196552 -0.425907279488986 Q96BZ8 LENG1 Q96BZ8.S59.p_LENG1 Q96BZ8_S59s _1_1_59_59 Q96BZ8 Q96BZ8 Leukocyte receptor cluster member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35115.35115.4 26.55 21.91 26.55 2 1 1 0 918.2058 3589.8336 S59s Hydrogen 56 (R) HQNsLPELEAAEAGAPGSGPVDLFRELLEEGK (G) HQNS(0.99)LPELEAAEAGAPGS(0.0)GPVDLFRELLEEGK K:TMT10-Lys-Only,s:Phosphorylated S LENG1 30528.5 7 1 3613.1 46.92 HUMAN 1 -2.1902 -1.6332 KKARMPNSPAPHFAM-p A0A0J9YWL0;S1133-p KKARMPNSPAPHFAM 0.879897888357523 0.0681786670618894 0.0293333333333333 -0.461333333333333 1.09263544458842 15.5170271420131 0.0293333333333333 -0.461333333333333 0.777564555589341 0.0280735468722184 0.296956316727566 -2.97397098333593 A0A0J9YWL0 NotFound A0A0J9YWL0.S1133.p_NotFound A0A0J9YWL0_S1133s _1_1_1133_1133 A0A0J9YWL0 A0A0J9YWL0|Q9Y4K1 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18581.18581.5 20.58 20.58 99 1 1 1 0 587.4906 2853.458 S1133s TMT10 1130 (R) MPNsPAPHFAMPPIHEDHLEK (V) MPNS(1.0)PAPHFAMPPIHEDHLEK K:TMT10,s:Phosphorylated S CRYBG1 233643.7 3 26 79.1 640.71 HUMAN 1 1.0926 -15.517 KKARRGRSPKGEFKD-p Q14677-3;S245-p KKARRGRSPKGEFKD 0.34577429659907 0.0900357383948337 0.137333333333333 -0.185 8.56888289867291 13.8374525434902 0.137333333333333 -0.185 0.139031020371483 0.0413289855797168 1.73373338575463 -2.66154856632448 Q14677 CLINT1 Q14677.3.S245.p_CLINT1 Q14677-3_S245s _1_1_245_245 Q14677-3 Q14677-3|Q14677-2 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11526.11949.4 19.26 19.26 9.459 4 1 1 0 702.1219 2725.4975 S245s Hydrogen 243 (R) GRsPKGEFKDEEETVTTK (H) GRS(0.99)PKGEFKDEEET(0.0)VT(0.0)T(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S CLINT1 70350.7 16 17 632.1 256.73 HUMAN 1 8.5689 -13.8375 KKARVGGSDEEASGI-p A0A0B4J1V8;S359-p KKARVGGSDEEASGI 0.181245294135483 0.511002487155087 0.277333333333333 -0.0756666666666667 14.6205697465459 3.91029270981552 0.277333333333333 -0.0756666666666667 0.03450984632471 0.406415936244574 2.80758699451517 -0.899792781375715 A0A0B4J1V8 PPAN-P2RY11 A0A0B4J1V8.S359.p_PPAN-P2RY11 A0A0B4J1V8_S359s _1_1_359_359 A0A0B4J1V8 A0A0B4J1V8|Q9NQ55-3|Q9NQ55-2|A8MV53 HCG2039996 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5756.5756.2 15.8 15.8 6.596 3 1 1 0 720.8046 1360.6339 S359s Hydrogen 356 (R) VGGsDEEASGIPSR (T) VGGS(0.99)DEEAS(0.0)GIPS(0.0)R s:Phosphorylated S PPAN-P2RY11 89000.3 4 3 3312.1 54.23 HUMAN 1 14.6206 -3.9103 KKASFDHSPDSLPLR-p Q8NB78;S17-p KKASFDHSPDSLPLR 0.121924360222514 0.0464899964125906 0.284666666666667 -0.242333333333333 19.0112422667184 17.8278369630242 0.284666666666667 -0.242333333333333 0.0125567073714515 0.0164898347590208 3.66989187239981 -3.42473627618974 Q8NB78 KDM1B Q8NB78.S17.p_KDM1B Q8NB78_S17s _1_1_17_17 Q8NB78 Q8NB78|Q8NB78-2 Lysine-specific histone demethylase 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13746.13746.4 15.01 15.01 4.099 3 1 1 0 527.7811 2028.1278 S17s TMT10 11 (K) KASFDHsPDSLPLR (S) KAS(0.0)FDHS(0.99)PDS(0.0)LPLR K:TMT10,s:Phosphorylated S KDM1B 93523 5 1 2230.1 92.53 HUMAN 1 19.0112 -17.8278 KKATGAATPKKSAKK-p P10412;T146-p KKATGAATPKKSAKK 0.213475099509294 0.000993050805672115 0.227 -1.61633333333333 12.9316153536023 52.470186641101 0.227 -1.61633333333333 0.0509141461221195 5.66214955030378e-06 2.49875164777131 -17.4591005653714 P10412 HIST1H1E P10412.T146.p_HIST1H1E P10412_T146t _1_1_146_146 P10412 P10412 Histone H1.4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5735.5735.3 11.68 6.95 4.391 2 1 1 0 657.0711 1889.2354 T146t TMT10 140 (K) KATGAAtPKK (S) KAT(0.0)GAAT(0.99)PKK K:TMT10,t:Phosphorylated T HIST1H1E 21864.9 4 3 738.3 234.77 HUMAN 1 12.9316 -52.4702 KKAVPVESPVQKV__-p Q8TB61;S427-p KKAVPVESPVQKV__ 0.0740632396357817 0.00928203861225243 -0.391333333333333 -0.634 24.2589663228132 28.7014247789781 -0.391333333333333 -0.634 0.00375062261304703 0.00134852040431867 -4.85851104442504 -6.03752582893048 Q8TB61 SLC35B2 Q8TB61.S427.p_SLC35B2 Q8TB61_S427s _1_1_427_427 Q8TB61 Q8TB61|Q8TB61-2|Q8TB61-3|Q8TB61-4|Q8TB61-5 Adenosine 3'-phospho 5'-phosphosulfate transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15079.15079.3 17.49 14.25 99 1 1 1 0 683.4094 1968.2461 S427s TMT10 421 (K) KAVPVEsPVQKV (-) KAVPVES(1.0)PVQKV K:TMT10,s:Phosphorylated S SLC35B2 48084.4 6 1 4376.1 32.46 HUMAN 1 -24.259 -28.7014 KKAYILVTPLKSRKV-p Q6P0N0;T653-p KKAYILVTPLKSRKV 0.728727550156135 0.00129606731851265 0.0503333333333333 -1.091 2.60954244322944 47.2412308194968 0.0503333333333333 -1.091 0.548334732418167 1.88745635558306e-05 0.639925478060251 -13.9223210039145 Q6P0N0 MIS18BP1 Q6P0N0.T653.p_MIS18BP1 Q6P0N0_T653t _1_1_653_653 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21888.21888.3 18.48 18.48 15.594 2 1 1 0 638.3996 1833.2181 T653t TMT10 647 (K) KAYILVtPLK (S) KAY(0.0)ILVT(0.99)PLK K:TMT10,t:Phosphorylated T MIS18BP1 129996 6 22 54.1 728.39 HUMAN 1 2.6095 -47.2412 KKCARSESLIDASED-p O94888;S280-p KKCARSESLIDASED 0.568417101345875 0.15044604672958 0.0806666666666667 0.167333333333333 4.51428170807752 10.8212346199513 0.0806666666666667 0.167333333333333 0.353648507190143 0.0827706828317885 1.01424435051975 2.12388011871441 O94888 UBXN7 O94888.S280.p_UBXN7 O94888_S280s _1_1_280_280 O94888 O94888|C9JAT7 UBX domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23752.23955.3 20.62 21.25 1.11 4 1 1 0 748.3622 2163.0978 S280s TMT10 278 (R) SEsLIDASEDSQLEAAIR (A) S(0.0)ES(0.99)LIDAS(0.0)EDS(0.0)QLEAAIR s:Phosphorylated S UBXN7 55260.7 4 2 3980.1 39.79 HUMAN 1 4.5143 10.8212 KKCLELFSELAEDKE-p P08238;S417-p KKCLELFSELAEDKE 0.10616250316171 0.0269447225862344 -0.62 0.330666666666667 20.5054371482005 21.3044495513049 -0.62 0.330666666666667 0.00890135835015173 0.00740551123022274 -3.98827208587376 4.16043985248611 P08238 HSP90AB1 P08238.S417.p_HSP90AB1 P08238_S417s _1_1_417_417 P08238 P08238 Heat shock protein HSP 90-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.31783.31783.3 11.16 11.16 99 1 1 1 0 664.6668 1912.0138 S417s TMT10 412 (K) CLELFsELAEDK (E) CLELFS(1.0)ELAEDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HSP90AB1 83605 1 31 43.2 810.87 HUMAN 1 -20.5054 21.3044 KKCRVIPSQEHLNGP-p O14745;S247-p KKCRVIPSQEHLNGP 0.426534981583696 0.900999536455881 0.126 0.0143333333333333 6.81574274108438 0.633213591452083 0.126 0.0143333333333333 0.208173635111317 0.864328116644242 1.4287198225977 0.179144882165283 O14745 SLC9A3R1 O14745.S247.p_SLC9A3R1 O14745_S247s_1_1_247_247 O14745 O14745|O14745-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28308.28308.4 17.78 17.78 7.518 2 1 1 0 764.1579 2972.661 S247s N261n TMT10 244 (R) VIPsQEHLNGPLPVPFTnGEIQK (E) VIPS(0.99)QEHLN(0.0)GPLPVPFT(0.0)N(0.99)GEIQK K:TMT10,s:Phosphorylated S,n:Deamidated SLC9A3R1 39153 6 8 534.1 279.04 HUMAN 1 6.8157 0.6332 KKCYEMASHLRRSQY-p P07737;S133-p KKCYEMASHLRRSQY 0.123743629200835 0.487460741473528 0.274666666666667 0.087 18.8732426341674 4.16955112754339 0.274666666666667 0.087 0.0129621110120629 0.382864312864867 3.64119982077053 0.949238023696635 P07737 PFN1 P07737.S133.p_PFN1 P07737_S133s _1_1_133_133 P07737 P07737|K7EJ44 Profilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7010.7010.3 10.3 7.81 5.748 2 1 1 0 544.5841 1551.7722 S133s TMT10 128 (K) CYEMAsHLRR (S) CY(0.0)EMAS(0.99)HLRR C:Carbamidomethylation,s:Phosphorylated S PFN1 15225.1 1 6 1550.1 132.52 HUMAN 1 18.8732 4.1696 KKDEGSYSLEEPKQA-p P18827;S287-p KKDEGSYSLEEPKQA 0.676446338277874 0.0383760722253743 -0.06 -0.468666666666667 3.18053624828252 19.0216079258297 -0.06 -0.468666666666667 0.480779980125444 0.0125267729957901 -0.756848660385873 -3.66883097153054 P18827 SDC1 P18827.S287.p_SDC1 P18827_S287s _1_1_287_287 P18827 P18827 Syndecan-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11484.11484.4 15.56 10.64 3.816 3 1 1 0 749.4235 2914.6932 S287s TMT10 278 (R) MKKKDEGSYsLEEPK (Q) MKKKDEGS(0.0)Y(0.0)S(0.99)LEEPK K:TMT10,s:Phosphorylated S SDC1 32575.1 6 2 3921.1 40.65 HUMAN 1 -3.1805 -19.0216 KKDGRRMSFQKPKGT-p Q8N573-2;S83-p KKDGRRMSFQKPKGT 0.190312127567691 0.117702884594885 -0.331666666666667 0.258666666666667 14.0957229349516 12.2526509309815 -0.331666666666667 0.258666666666667 0.0389428477294207 0.059529866264998 -2.71051035865498 2.37601461163636 Q8N573 OXR1 Q8N573.2.S83.p_OXR1 Q8N573-2_S83s _1_1_83_83 Q8N573-2 Q8N573|Q8N573-8|Q8N573-5|Q8N573-2|Q8N573-3 Isoform 2 of Oxidation resistance protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14119.14119.3 8.7 8.7 99 1 1 1 0 544.9764 1552.9488 S83s TMT10 82 (R) MsFQKPK (G) MS(1.0)FQKPK K:TMT10,s:Phosphorylated S OXR1 94303 4 3 1415.1 144.6 HUMAN 1 -14.0957 12.2527 KKDHSVDSFKNQKHP-p Q641Q2;S912-p KKDHSVDSFKNQKHP 0.569231991201141 0.915532956879461 -0.195 0.0136666666666667 4.50365856940083 0.538920797752023 -0.195 0.0136666666666667 0.354514614360331 0.883299369068066 -1.01226078497331 0.153840525574887 Q641Q2 FAM21A Q641Q2.S912.p_FAM21A Q641Q2_S912s _1_1_912_912 Q641Q2 Q641Q2|Q641Q2-2|F8W7U3|A0A087WYF6 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9814.9814.3 8.91 8.91 4.643 2 1 1 0 491.578 1392.7524 S912s TMT10 907 (K) DHSVDsFK (N) DHS(0.0)VDS(0.99)FK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 1 50 12.1 1178.3 HUMAN 1 -4.5037 0.5389 KKDIDDNSNGTYEKM-p Q8NEZ4-3;S177-p KKDIDDNSNGTYEKM 0.20352936945728 0.310784448911206 0.244666666666667 -0.188333333333333 13.3952786064668 6.70687203084335 0.244666666666667 -0.188333333333333 0.0457585379151833 0.213458177403577 2.58254396693694 -1.40922558063883 Q8NEZ4 KMT2C Q8NEZ4.3.S177.p_KMT2C Q8NEZ4-3_S177s_1_1_177_177 Q8NEZ4-3 Q8NEZ4-3|H0YMU7 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11721.11721.3 14.53 14.53 1.661 3 1 1 0 637.2876 1828.8965 S177s N178n TMT10 172 (K) DIDDNsnGTYEK (M) DIDDN(0.0)S(0.99)N(0.99)GT(0.0)Y(0.0)EK K:TMT10,s:Phosphorylated S,n:Deamidated KMT2C 554869.1 2 5 88.1 626.31 HUMAN 1 13.3953 -6.7069 KKDKKSRTPPRSYNA-p Q8WXA9-2;T479-p KKDKKSRTPPRSYNA 0.260386657049657 0.30927317070941 0.166666666666667 0.185666666666667 11.0801789958933 6.73620752175314 0.166666666666667 0.185666666666667 0.0779797970232152 0.212021180286159 2.17016199961365 1.41437793353538 Q8WXA9 SREK1 Q8WXA9.2.T479.p_SREK1 Q8WXA9-2_T479t _1_1_479_479 Q8WXA9-2 Q8WXA9-2 Isoform 2 of Splicing regulatory glutamine/lysine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3389.3389.2 11.09 6.58 8.713 4 1 1 0 614.7775 1148.5807 T479t Hydrogen 479 (R) tPPRSYNASR (R) T(0.99)PPRS(0.0)Y(0.0)NAS(0.0)R t:Phosphorylated T SREK1 71819.3 11 3 1303.1 156.21 HUMAN 1 11.0802 6.7362 KKDNQESSDAELSSS-p Q96JM3;S627-p KKDNQESSDAELSSS 0.274481083437932 0.0120284235378374 -0.274333333333333 0.455333333333333 10.6228227596269 26.8163827831969 -0.274333333333333 0.455333333333333 0.0866398564468157 0.00208142957752726 -2.0901549427809 5.51147582526011 Q96JM3 CHAMP1 Q96JM3.S627.p_CHAMP1 Q96JM3_S627s _1_1_627_627 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15950.15950.3 16.15 16.15 1.138 6 1 1 0 814.0462 2360.1506 S627s TMT10 622 (K) DNQESsDAELSSSEYIK (T) DNQES(0.0)S(0.99)DAELS(0.0)S(0.0)S(0.0)EY(0.0)IK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 6 34 25.1 950.05 HUMAN 1 -10.6228 26.8164 KKDPANPSPVMPGIA-p Q70EL1;S1036-p KKDPANPSPVMPGIA 0.604702941950129 0.184070754981056 -0.0736666666666667 0.143333333333333 4.03569534362339 9.6634702429313 -0.0736666666666667 0.143333333333333 0.394848475577623 0.108057017344158 -0.92394667610789 1.92255021436706 Q70EL1 USP54 Q70EL1.S1036.p_USP54 Q70EL1_S1036s_1_1_1036_1036 Q70EL1 Q70EL1|Q70EL1-7|Q70EL1-8|Q70EL1-10|Q70EL1-9 Inactive ubiquitin carboxyl-terminal hydrolase 54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19002.19002.5 17.38 16.66 1.622 10 1 1 0 970.0774 4765.3714 S1036s N1059n TMT10 1030 (K) KDPANPsPVMPGIATSERGDEHSLGCSPSnSSAQPSLPLYR (T) KDPAN(0.0)PS(0.99)PVMPGIAT(0.0)S(0.0)ERGDEHS(0.0)LGCS(0.0)PS(0.0)N(0.99)S(0.0)S(0.0)AQPS(0.0)LPLY(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated USP54 189724.2 4 9 525.1 282.54 HUMAN 1 -4.0357 9.6635 KKDQDSRSAPEPKKP-p P23588;S572-p KKDQDSRSAPEPKKP 0.597752423488761 0.048037171009988 0.0933333333333333 0.366666666666667 4.12817555292342 17.6285343832839 0.0933333333333333 0.366666666666667 0.386529321779933 0.017264204100325 0.941552529777423 3.38477488198018 P23588 EIF4B P23588.S572.p_EIF4B P23588_S572s _1_1_572_572 P23588 E7EX17|P23588|P23588-2 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8832.8832.4 11.36 11.36 11.358 2 1 1 0 652.116 2525.4745 S572s TMT10 572 (R) sAPEPKKPEENPASK (F) S(0.99)APEPKKPEENPAS(0.0)K K:TMT10,s:Phosphorylated S EIF4B 69207 1 21 146.1 516.36 HUMAN 1 4.1282 17.6285 KKDSNELSDSAGEED-p Q9Y6X9;S777-p KKDSNELSDSAGEED 0.298289139550046 0.00792195598687765 -0.212 0.622 9.87848473599963 29.9677604928166 -0.212 0.622 0.102837503808987 0.00100745104276061 -1.96060663628628 6.41217129848056 Q9Y6X9 MORC2 Q9Y6X9.S777.p_MORC2 Q9Y6X9_S777s _1_1_777_777 Q9Y6X9 Q9Y6X9|Q9Y6X9-2 MORC family CW-type zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10136.10136.4 15.95 15.95 1.364 4 1 1 0 734.113 2853.4681 S777s TMT10 771 (K) KDSNELsDSAGEEDSADLKR (A) KDS(0.0)NELS(0.99)DS(0.0)AGEEDS(0.0)ADLKR K:TMT10,s:Phosphorylated S MORC2 118619.8 4 10 309.1 372.4 HUMAN 1 -9.8785 29.9678 KKDVSHSSPVDLKIP-p Q96JN0;S249-p KKDVSHSSPVDLKIP 0.171396449036957 0.00613510020214432 -0.244 -0.555666666666667 15.2474711704649 31.8842241937752 -0.244 -0.555666666666667 0.029871214672034 0.000648003841734666 -2.9249947530054 -7.01448030564503 Q96JN0 LCOR Q96JN0.S249.p_LCOR Q96JN0_S249s _1_1_249_249 Q96JN0 Q96JN0|Q96JN0-2 Ligand-dependent corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16688.16688.4 16 16 1.168 3 1 1 0 579.5684 2235.2861 S249s TMT10 244 (K) DVSHSsPVDLKIPQVR (G) DVS(0.0)HS(0.0)S(0.99)PVDLKIPQVR K:TMT10,s:Phosphorylated S LCOR 47119.8 2 1 673.2 247.79 HUMAN 1 -15.2475 -31.8842 KKEELVPSEEDFQGI-p O75150;S585-p KKEELVPSEEDFQGI 0.405599270487362 0.548083330776943 0.13 0.089 7.23791520294262 3.51253577368167 0.13 0.0890000000000001 0.188889788230505 0.445396113033475 1.50259810976213 0.822595542756743 O75150 RNF40 O75150.S585.p_RNF40 O75150_S585s _1_1_585_585 O75150 O75150|H3BP71|O75150-4|O75150-3 E3 ubiquitin-protein ligase BRE1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22312.22312.5 26.08 23.06 4.871 11 1 1 0 986.2964 4847.5228 S585s TMT10 563 (K) EMAPVPGTTTTTTSVKKEELVPsEEDFQGITPGAQGPSSR (G) EMAPVPGT(0.0)T(0.0)T(0.0)T(0.0)T(0.0)T(0.0)S(0.0)VKKEELVPS(0.99)EEDFQGIT(0.0)PGAQGPS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S RNF40 114390.1 1 2 4525.1 30.33 HUMAN 1 7.2379 3.5125 KKEESEESDDDMGFG-p P05387;S105-p KKEESEESDDDMGFG 0.507633728896818 0.0309281815065414 -0.11 0.453 5.43124752760275 20.4026481340216 -0.11 0.453 0.286335534192594 0.00911454905337941 -1.18253232170548 3.96209766040901 P05387 RPLP2 P05387.S105.p_RPLP2 P05387_S105s _1_1_105_105 P05387 P05387|P05386|P05386-2 60S acidic ribosomal protein P2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28167.28789.2 16.01 16.01 2.191 2 1 1 0 1244.5287 2408.0852 S105s TMT10 99 (K) KEESEEsDDDMGFGLFD (-) KEES(0.0)EES(0.99)DDDMGFGLFD K:TMT10,s:Phosphorylated S RPLP2 11664.7 30 10 1134.1 173.84 HUMAN 1 -5.4312 20.4026 KKEETPGTPKKKETK-p Q99442;T158-p KKEETPGTPKKKETK 0.082915928127352 0.0997236377526893 -0.896666666666667 -0.272 23.1170253944623 13.2332178794299 -0.896666666666667 -0.272 0.00487862526514962 0.0474983159548682 -4.58214674008611 -2.55174751655615 Q99442 SEC62 Q99442.T158.p_SEC62 Q99442_T158t _1_1_158_158 Q99442 Q99442 Translocation protein SEC62 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6323.6323.2 15.99 8.92 3.446 3 1 1 0 1228.6748 2376.3792 T158t TMT10 148 (K) EESKKEETPGtPK (K) EES(0.0)KKEET(0.0)PGT(0.99)PK K:TMT10,t:Phosphorylated T SEC62 46203.3 25 2 1276.1 159.11 HUMAN 1 -23.117 -13.2332 KKEGLRGSPPGPQEL-p Q8NC06-2;S222-p KKEGLRGSPPGPQEL 0.845323173757714 0.110459719531907 -0.0276666666666667 -0.219 1.40997583348947 12.6330062322271 -0.0276666666666667 -0.219 0.722773825498232 0.054538021246267 -0.373774424871435 -2.44384627742378 Q8NC06 ACBD4 Q8NC06.2.S222.p_ACBD4 Q8NC06-2_S222s _1_1_222_222 Q8NC06-2 Q8NC06-2 Isoform 2 of Acyl-CoA-binding domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32563.32769.3 24.65 17.89 14.182 2 1 1 0 895.8052 2605.43 S222s TMT10 217 (K) EGLRGsPPGPQELDVWLLGTVR (A) EGLRGS(0.99)PPGPQELDVWLLGT(0.0)VR s:Phosphorylated S ACBD4 34983.4 5 3 1641.1 124.62 HUMAN 1 -1.41 -12.633 KKEGPVASPPFMDLE-p Q9H4A3-7;S2391-p KKEGPVASPPFMDLE 0.0933084416341688 0.959680830958037 -0.471666666666667 -0.00599999999999999 21.886729327861 0.257336805005059 -0.471666666666667 -0.006 0.00647630162474174 0.942467362310032 -4.29607514658107 -0.0755750672664059 Q9H4A3 WNK1 Q9H4A3.7.S2391.p_WNK1 Q9H4A3-7_S2391s _1_1_2391_2391 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2|F5GWT4|Q9H4A3-4 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36287.36287.5 19.62 19.62 99 1 1 1 0 660.9711 3220.8623 S2391s TMT10 2385 (K) KEGPVAsPPFMDLEQAVLPAVIPK (K) KEGPVAS(1.0)PPFMDLEQAVLPAVIPK K:TMT10,s:Phosphorylated S WNK1 301202.7 14 18 162.1 495.27 HUMAN 1 -21.8867 -0.2573 KKEIVNESRQVLQEP-p Q9NPG1;S523-p KKEIVNESRQVLQEP 0.259441883712572 0.902189378371273 0.211333333333333 0.0176666666666667 11.1201643110827 0.623150993524219 0.211333333333333 0.0176666666666667 0.0772651352032169 0.866333085710548 2.17717458884705 0.176464539631004 Q9NPG1 FZD3 Q9NPG1.S523.p_FZD3 Q9NPG1_S523s _1_1_523_523 Q9NPG1 Q9NPG1 Frizzled-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26785.26785.4 14.27 10.82 5.993 3 1 1 0 922.4848 3606.9441 S523s TMT10 518 (K) EIVNEsRQVLQEPDFAQSLLRDPNTPIIR (K) EIVNES(0.99)RQVLQEPDFAQS(0.0)LLRDPNT(0.0)PIIR s:Phosphorylated S FZD3 77630.7 1 1 5135.1 22.54 HUMAN 1 11.1202 0.6232 KKEKKQQSIAGSADS-p Q12904-2;S164-p KKEKKQQSIAGSADS 0.816162932725909 0.193374944683064 0.0353333333333333 0.138333333333333 1.69353239712711 9.38185041390444 0.0353333333333333 0.138333333333333 0.677090562156976 0.115296190658329 0.439809669962812 1.87378030630056 Q12904 AIMP1 Q12904.2.S164.p_AIMP1 Q12904-2_S164s _1_1_164_164 Q12904-2 Q12904-2 Isoform 2 of Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11367.11367.4 14.51 14.51 2.261 4 1 1 0 664.3665 2574.4818 S164s TMT10 161 (K) KQQsIAGSADSKPIDVSR (L) KQQS(0.99)IAGS(0.0)ADS(0.0)KPIDVS(0.0)R K:TMT10,s:Phosphorylated S AIMP1 37380.8 2 2 2576.1 78.03 HUMAN 1 1.6935 9.3819 KKEKSSNSDRSTNLK-p Q15424;S507-p KKEKSSNSDRSTNLK 0.848303400988284 0.0104414023033067 -0.0393333333333333 0.54 1.38044283298684 27.8011059117308 -0.0393333333333334 0.54 0.727705599478383 0.00165916435475895 -0.366762272084838 5.78172656692369 Q15424 SAFB Q15424.S507.p_SAFB Q15424_S507s _1_1_507_507 Q15424 Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5069.5069.3 11.35 11.35 2.207 5 1 1 0 582.9644 1666.9124 S507s TMT10 504 (K) SSNsDRSTNLK (R) S(0.0)S(0.0)NS(0.99)DRS(0.0)T(0.0)NLK K:TMT10,s:Phosphorylated S SAFB 103096.3 8 31 83.1 629.62 HUMAN 1 -1.3804 27.8011 KKELSEESEDEELQL-p Q99543;S63-p KKELSEESEDEELQL 0.170911150358501 0.0149080933883694 -0.380333333333333 0.382333333333333 15.3067336674611 25.2834118685225 -0.380333333333333 0.382333333333333 0.0294663696881875 0.00296250309780499 -2.93617975587629 5.10944460925912 Q99543 DNAJC2 Q99543.S63.p_DNAJC2 Q99543_S63s _1_1_63_63 Q99543 Q99543|Q99543-2|F2Z3N9|F2Z3H0 DnaJ homolog subfamily C member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.32623.32623.3 18.8 18.8 2.237 2 1 1 0 988.1367 2882.4269 S63s TMT10 58 (K) ELSEEsEDEELQLEEFPMLK (T) ELS(0.0)EES(0.99)EDEELQLEEFPMLK K:TMT10,s:Phosphorylated S DNAJC2 72508.6 2 4 2137.1 96.08 HUMAN 1 -15.3067 25.2834 KKEPKEPSPKQDVVG-p Q9ULU4-19;S764-p KKEPKEPSPKQDVVG 0.318436709095685 0.0113523621250542 -0.28 0.598666666666667 9.30514052586372 27.2283011890387 -0.28 0.598666666666667 0.11735077103642 0.00189308398331567 -1.86119799548883 5.62334302394787 Q9ULU4 ZMYND8 Q9ULU4.19.S764.p_ZMYND8 Q9ULU4-19_S764s _1_1_764_764 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-10|Q9ULU4-13|Q9ULU4-20|Q9ULU4-5|Q9ULU4-9|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-18|Q9ULU4-21|Q9ULU4-23|Q9ULU4-15|Q9ULU4-6|Q9ULU4-3|Q9ULU4-4 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11533.11533.2 14.24 8.42 99 1 1 1 0 976.0463 1871.1205 S764s TMT10 762 (K) EPsPKQDVVGK (T) EPS(1.0)PKQDVVGK K:TMT10,s:Phosphorylated S ZMYND8 139738.7 14 15 57.1 712.18 HUMAN 1 -9.3051 27.2283 KKEPPRASPPGGLAE-p O60341;S69-p KKEPPRASPPGGLAE 0.741432182429417 0.0510130251772862 0.0453333333333333 0.262 2.46566303182813 17.2576797388725 0.0453333333333333 0.262 0.566805031518525 0.0188032112861636 0.609623867535362 3.31098969990237 O60341 KDM1A O60341.S69.p_KDM1A O60341_S69s _1_1_69_69 O60341 O60341-2 Lysine-specific histone demethylase 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18414.18414.5 32.68 32.68 7.978 7 1 1 0 1060.5555 5218.7774 S69s TMT10 62 (R) KKEPPRAsPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR (R) KKEPPRAS(0.99)PPGGLAEPPGS(0.0)AGPQAGPT(0.0)VVPGS(0.0)AT(0.0)PMET(0.0)GIAET(0.0)PEGR K:TMT10,s:Phosphorylated S KDM1A 93414.4 10 3 232.1 420.78 HUMAN 1 2.4657 17.2577 KKEPSDKSVDS____-p Q9NVA4;S435-p KKEPSDKSVDS____ 0.152872172873321 0.283944374109889 -0.273333333333333 -0.112666666666667 16.4033853572252 7.20946385041806 -0.273333333333333 -0.112666666666667 0.0228908260051153 0.190131298823427 -3.14603274971236 -1.49720510981512 Q9NVA4 TMEM184C Q9NVA4.S435.p_TMEM184C Q9NVA4_S435sS438s_2_2_435_438 Q9NVA4 Q9NVA4 Transmembrane protein 184C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24509.24509.4 7.69 7.69 1.147 6 2 2 0 892.9591 3408.8767 S435s S438s TMT10 416 (K) ISDEILSDTIGEKKEPSDKsVDs (-) IS(0.0)DEILS(0.0)DT(0.0)IGEKKEPS(0.0)DKS(0.99)VDS(0.99) K:TMT10,s:Phosphorylated S TMEM184C 50939.5 4 3 4180.1 35.97 HUMAN 1 -16.4034 -7.2095 KKEQSEVSVSPRASK-p Q7L4I2;S30-p KKEQSEVSVSPRASK 0.266431557797534 0.057206359255931 -0.288666666666667 0.240666666666667 10.8845110315217 16.557434120498 -0.288666666666667 0.240666666666667 0.0815734624833138 0.0220930964207849 -2.13588867568468 3.17362880463539 Q7L4I2 RSRC2 Q7L4I2.S30.p_RSRC2 Q7L4I2_S30sS32s_2_2_30_32 Q7L4I2 Q7L4I2|E9PI52 Arginine/serine-rich coiled-coil protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7786.7786.2 9.59 9.59 3.736 3 2 2 0 753.8262 1346.7113 S30s S32s TMT10 25 (K) EQSEVsVsPR (A) EQS(0.0)EVS(0.99)VS(0.99)PR s:Phosphorylated S RSRC2 50615.9 11 9 1070.1 180.75 HUMAN 1 -10.8845 16.5574 KKERRRNSINRNFIG-p Q12965;S736-p KKERRRNSINRNFIG 0.276322361958096 0.516091928353727 -0.338333333333333 0.182666666666667 10.5632357347576 3.85703802261255 -0.338333333333333 0.182666666666667 0.0878367840219167 0.411430229287278 -2.07975663900148 0.889554991582626 Q12965 MYO1E Q12965.S736.p_MYO1E Q12965_S736s _1_1_736_736 Q12965 Q12965 Unconventional myosin-Ie HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22485.22485.5 19.67 12.08 5.034 2 1 1 0 777.9968 3805.9961 S736s TMT10 734 (R) RNsINRNFIGDYIGMEEHPELQQFVGKR (E) RNS(0.99)INRNFIGDY(0.0)IGMEEHPELQQFVGKR K:TMT10,s:Phosphorylated S MYO1E 127630.1 1 1 2895.1 66.64 HUMAN 1 -10.5632 3.857 KKERRTPSDDEEDNL-p Q641Q2;S333-p KKERRTPSDDEEDNL 0.97076436181379 0.0255839643834166 0.00566666666666667 0.315 0.254107622992053 21.6611313162206 0.00566666666666668 0.315 0.943168391338946 0.0068216097134525 0.0746590015349526 4.24047051626808 Q641Q2 FAM21A Q641Q2.S333.p_FAM21A Q641Q2_S333s _1_1_333_333 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2|Q9Y4E1-4|Q9Y4E1-2|E7ESD2|Q9Y4E1-6|Q9Y4E1-3|J3KP36|F8W7U3 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.34663.35073.4 24.25 24.25 1.307 6 1 1 0 1100.2817 4318.1283 S333s TMT10 331 (R) TPsDDEEDNLFAPPKLTDEDFSPFGSGGGLFSGGK (G) T(0.0)PS(0.99)DDEEDNLFAPPKLT(0.0)DEDFS(0.0)PFGS(0.0)GGGLFS(0.0)GGK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 39 24 12.1 1178.3 HUMAN 1 0.2541 21.6611 KKETERASPIKMDLA-p E7EVA0;S401-p KKETERASPIKMDLA 0.425998757587894 0.0144840230392695 -0.152 -0.544666666666667 6.82706105455544 25.4845948874655 -0.152 -0.544666666666667 0.207631812232094 0.00282839793342228 -1.43070589992913 -5.16096122440551 E7EVA0 NotFound E7EVA0.S401.p_NotFound E7EVA0_S401s _1_1_401_401 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13527.13527.5 17.86 9.87 1.812 3 1 1 0 580.3337 2817.6678 S401s TMT10 395 (K) KETERAsPIKMDLAPSK (D) KET(0.0)ERAS(0.99)PIKMDLAPS(0.0)K K:TMT10,s:Phosphorylated S MAP4 246695.2 14 9 38.1 865.62 HUMAN 1 -6.8271 -25.4846 KKETITESAGRQQKK-p J9JIE6;S111-p KKETITESAGRQQKK 0.870862434212305 0.00246432253845191 -0.0266666666666667 -0.823666666666667 1.17608890113212 39.9516123340473 -0.0266666666666667 -0.823666666666667 0.762765619912401 0.00010112039714152 -0.317483345332484 -10.1096183207073 J9JIE6 TMCO1 J9JIE6.S111.p_TMCO1 J9JIE6_S111s _1_1_111_111 J9JIE6 J9JIE6|Q9UM00|Q9UM00-2 Calcium load-activated calcium channel HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6365.6365.4 12.1 12.1 2.388 3 1 1 0 497.5352 1907.1529 S111s TMT10 104 (K) KKETITEsAGR (Q) KKET(0.0)IT(0.0)ES(0.99)AGR K:TMT10,s:Phosphorylated S TMCO1 27477.9 2 1 4473.1 30.94 HUMAN 1 -1.1761 -39.9516 KKETSFGSSENITMT-p Q9UMZ2;S935-p KKETSFGSSENITMT 0.569246194913171 0.630123181147589 -0.0783333333333333 -0.063 4.50201873864784 2.72745826998732 -0.0783333333333333 -0.063 0.354648499030395 0.533647123740207 -1.01195451511429 -0.664402197653705 Q9UMZ2 SYNRG Q9UMZ2.S935.p_SYNRG Q9UMZ2_S935s _1_1_935_935 Q9UMZ2 Q9UMZ2|Q9UMZ2-5|Q9UMZ2-7|Q9UMZ2-3|Q9UMZ2-8|Q9UMZ2-4|Q9UMZ2-9|Q9UMZ2-6 Synergin gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22248.22248.2 17.08 17.08 1.19 8 1 1 0 1179.0668 2277.1685 S935s TMT10 930 (K) ETSFGsSENITMTSLSK (V) ET(0.0)S(0.0)FGS(0.99)S(0.0)ENIT(0.0)MT(0.0)S(0.0)LS(0.0)K K:TMT10,s:Phosphorylated S SYNRG 141393.5 22 12 236.1 418.49 HUMAN 1 -4.502 -2.7275 KKEVKVKSPVEKKEK-p Q96B01;S241-p KKEVKVKSPVEKKEK 0.13475082710075 0.00103215678026976 0.326 -1.39833333333333 17.8557826415875 51.3679970633768 0.326 -1.39833333333333 0.0163840677758153 7.29794008688204e-06 3.43313710784203 -16.6481704413633 Q96B01 RAD51AP1 Q96B01.S241.p_RAD51AP1 Q96B01_S241s _1_1_241_241 Q96B01 Q96B01|Q96B01-2|Q96B01-3 RAD51-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8278.8278.3 7.42 1.81 99 1 1 1 0 637.7338 1831.2187 S241s TMT10 239 (K) VKsPVEKK (E) VKS(1.0)PVEKK K:TMT10,s:Phosphorylated S RAD51AP1 38684.9 3 3 1345.1 151.31 HUMAN 1 17.8558 -51.368 KKFCAGGSYVGEDCP-p P55786;S531-p KKFCAGGSYVGEDCP 0.430184643956734 0.0822763814744312 0.109666666666667 0.212666666666667 6.74749084570477 14.3721469772627 0.109666666666667 0.212666666666667 0.211471046966218 0.0365414100917695 1.41673632116 2.75979594440272 P55786 NPEPPS P55786.S531.p_NPEPPS P55786_S531s _1_1_531_531 P55786 P55786|E9PLK3|P55786-2 Puromycin-sensitive aminopeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29000.29000.5 15.08 15.08 6.342 6 1 1 0 868.8167 4260.1019 S531s TMT10 525 (K) KFCAGGsYVGEDCPQWMVPITISTSEDPNQAK (L) KFCAGGS(0.99)Y(0.0)VGEDCPQWMVPIT(0.0)IS(0.0)T(0.0)S(0.0)EDPNQAK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NPEPPS 103959 4 3 1607.1 127.86 HUMAN 1 6.7475 14.3721 KKFDHESSPGTDEDK-p Q13427;S745-p KKFDHESSPGTDEDK 0.207329300357563 0.279520955453154 0.347333333333333 0.132333333333333 13.2046271173383 7.29360711161651 0.347333333333333 0.132333333333333 0.0478120415521643 0.186483017889613 2.5480058528001 1.51188059582865 Q13427 PPIG Q13427.S745.p_PPIG Q13427_S745s _1_1_745_745 Q13427 Q13427|E9PG73 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7067.7067.4 17.62 17.62 1.178 3 1 1 0 708.3657 2750.4767 S745s TMT10 737 (K) NKKFDHESsPGTDEDK (S) NKKFDHES(0.0)S(0.99)PGT(0.0)DEDK K:TMT10,s:Phosphorylated S PPIG 89129.1 11 18 112.1 571.91 HUMAN 1 13.2046 7.2936 KKFELLPTPPLSPSR-p P01106-2;T73-p KKFELLPTPPLSPSR 0.698770973809784 0.100243248738758 -0.059 0.202333333333333 2.92532827691511 13.2000357076052 -0.059 0.202333333333333 0.509879055098167 0.0478626157051802 -0.705204389360362 2.54575301457567 P01106 MYC P01106.2.T73.p_MYC P01106-2_T73tS77s_2_2_73_77 P01106-2 P04198|P01106-2|A0A087WUS5|H0YBT0|A0A0B4J1R1 Isoform 2 of Myc proto-oncogene protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28406.28406.3 13.59 13.59 1.279 3 2 2 0 734.0568 2040.2258 T73t S77s TMT10 67 (K) KFELLPtPPLsPSR (R) KFELLPT(0.99)PPLS(0.99)PS(0.0)R K:TMT10,t:Phosphorylated T,s:Phosphorylated S MYC 51134.7 9 6 2515.1 80.3 HUMAN 1 -2.9253 13.2 KKFGLHGSSGKLTGS-p Q9NV70-2;S448-p KKFGLHGSSGKLTGS 0.125743941781331 0.0194616458380096 -0.579 0.426666666666667 18.7083393617325 23.4945973008756 -0.579 0.426666666666667 0.0134637507728112 0.00447239620115231 -3.60706530985391 4.66695988505163 Q9NV70 EXOC1 Q9NV70.2.S448.p_EXOC1 Q9NV70-2_S448s _1_1_448_448 Q9NV70-2 Q9NV70-2 Isoform 2 of Exocyst complex component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13907.13907.4 16.23 16.23 1.104 7 1 1 0 751.4279 2922.7183 S448s TMT10 442 (K) KFGLHGsSGKLTGSTSSLNK (L) KFGLHGS(0.99)S(0.0)GKLT(0.0)GS(0.0)T(0.0)S(0.0)S(0.0)LNK K:TMT10,s:Phosphorylated S EXOC1 101136.7 8 5 871.2 209.68 HUMAN 1 -18.7083 23.4946 KKFGYTVSEENYMCR-p Q96EK6;S173-p KKFGYTVSEENYMCR 0.300240588687515 0.320397691862231 0.239 -0.142333333333333 9.82310710891609 6.53736428342976 0.239 -0.142333333333333 0.104157198231018 0.221954304329714 1.9509938789176 -1.3794064009264 Q96EK6 GNPNAT1 Q96EK6.S173.p_GNPNAT1 Q96EK6_S173s _1_1_173_173 Q96EK6 Q96EK6|G3V5E4 Glucosamine 6-phosphate N-acetyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16982.16982.3 12.27 12.27 3.069 4 1 1 0 774.6958 2242.1037 S173s TMT10 167 (K) KFGYTVsEENYMCR (R) KFGY(0.0)T(0.0)VS(0.99)EENY(0.0)MCR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GNPNAT1 21091.1 3 3 2517.1 80.28 HUMAN 1 9.8231 -6.5374 KKFHSSDSEEEEHKK-p Q96ST2;S365-p KKFHSSDSEEEEHKK 0.214056293472303 0.0103967701171802 -0.197333333333333 0.616666666666667 12.9006568481231 27.8393454829582 -0.197333333333333 0.616666666666667 0.0512783822203748 0.00164461956205841 -2.49318113576251 5.79241903914452 Q96ST2 IWS1 Q96ST2.S365.p_IWS1 Q96ST2_S365s _1_1_365_365 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5409.5409.5 17.81 13.41 2.708 3 1 1 0 543.486 2633.4341 S365s TMT10 359 (K) KFHSSDsEEEEHKK (Q) KFHS(0.0)S(0.0)DS(0.99)EEEEHKK K:TMT10,s:Phosphorylated S IWS1 92010 4 3 230.1 422.87 HUMAN 1 -12.9007 27.8393 KKFSKTRSKDIFDQL-p P25205-2;S337-p KKFSKTRSKDIFDQL 0.138588234742825 0.016847251306219 0.425 -0.377666666666667 17.5762092381257 24.4748886090529 0.425 -0.377666666666667 0.0174734666807074 0.00356870902445605 3.37700028782811 -4.90604348397549 P25205 MCM3 P25205.2.S337.p_MCM3 P25205-2_S337s _1_1_337_337 P25205-2 P25205-2|J3KQ69 Isoform 2 of DNA replication licensing factor MCM3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20600.20600.3 13.07 8.45 99 1 1 1 0 568.3118 1622.9518 S337s Hydrogen 337 (R) sKDIFDQLAK (S) S(1.0)KDIFDQLAK K:TMT10-Lys-Only,s:Phosphorylated S MCM3 96534.2 1 3 136.1 528.96 HUMAN 1 17.5762 -24.4749 KKFYEAFSKNLKLGI-p P08238;S434-p KKFYEAFSKNLKLGI 0.459299895698651 0.159188365613532 -0.142666666666667 -0.152 6.23099870233343 10.4996205350161 -0.142666666666667 -0.152 0.238177169484858 0.0891328814623652 -1.32561160676786 -2.06777757924635 P08238 HSP90AB1 P08238.S434.p_HSP90AB1 P08238_S434s _1_1_434_434 P08238 P08238 Heat shock protein HSP 90-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22103.22103.2 10.77 10.77 10.765 2 1 1 0 715.3633 1349.7506 S434s TMT10 429 (K) FYEAFsK (N) FY(0.0)EAFS(0.99)K K:TMT10,s:Phosphorylated S HSP90AB1 83605 1 32 43.2 810.87 HUMAN 1 -6.231 -10.4996 KKFYEQFSKNIKLGI-p P07900;S442-p KKFYEQFSKNIKLGI 0.698217636520864 0.482884442961378 0.0563333333333333 0.072 2.93190639753424 4.21903801640107 0.0563333333333333 0.072 0.509107342075362 0.378526420892277 0.706547458200152 0.958605170562003 P07900 HSP90AA1 P07900.S442.p_HSP90AA1 P07900_S442s _1_1_442_442 P07900 P07900-2 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16444.16444.3 8.5 8.5 8.501 2 1 1 0 615.3391 1764.0299 S442s TMT10 436 (K) KFYEQFsK (N) KFY(0.0)EQFS(0.99)K K:TMT10,s:Phosphorylated S HSP90AA1 85057.6 1 12 43.1 810.87 HUMAN 1 2.9319 4.219 KKGDVEGSQSQDEGE-p Q9UQE7;S1065-p KKGDVEGSQSQDEGE 0.338303322331957 0.0148829268029308 0.140666666666667 0.406333333333333 8.76215440940263 25.2952897255747 0.140666666666667 0.406333333333333 0.132979458167122 0.00295441178783886 1.76719153747873 5.11247598808525 Q9UQE7 SMC3 Q9UQE7.S1065.p_SMC3 Q9UQE7_S1065sS1067s_2_2_1065_1067 Q9UQE7 Q9UQE7 Structural maintenance of chromosomes protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6607.6607.3 13.91 13.91 4.352 4 2 2 0 929.0586 2625.2276 S1065s S1067s TMT10 1059 (K) KGDVEGsQsQDEGEGSGESER (G) KGDVEGS(0.99)QS(0.99)QDEGEGS(0.0)GES(0.0)ER K:TMT10,s:Phosphorylated S SMC3 141938.5 7 7 1472.1 139.47 HUMAN 1 8.7622 25.2953 KKGGKNISPVVFQLW-p Q6ZN28;S413-p KKGGKNISPVVFQLW 0.633866086660159 0.880391589538477 -0.0746666666666667 0.0203333333333334 3.68634461062684 0.777822365743165 -0.0746666666666667 0.0203333333333333 0.427922910701332 0.836022110370343 -0.856678262144097 0.217158976621598 Q6ZN28 MACC1 Q6ZN28.S413.p_MACC1 Q6ZN28_S413s _1_1_413_413 Q6ZN28 Q6ZN28 Metastasis-associated in colon cancer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34815.34815.3 11.49 11.49 99 1 1 1 0 642.691 1846.0991 S413s TMT10 411 (K) NIsPVVFQLWGK (Q) NIS(1.0)PVVFQLWGK K:TMT10,s:Phosphorylated S MACC1 97436.1 1 8 744.1 233.51 HUMAN 1 -3.6863 0.7778 KKGKRPPTPCSDPER-p Q9BW71;T84-p KKGKRPPTPCSDPER 0.246226110077291 0.109254310366661 0.209 0.181666666666667 11.6467934876483 12.7034150708555 0.209 0.181666666666667 0.0684416784003121 0.0536609667879367 2.26983770202642 2.45644757507083 Q9BW71 HIRIP3 Q9BW71.T84.p_HIRIP3 Q9BW71_T84t _1_1_84_84 Q9BW71 Q9BW71|Q9BW71-2|Q9BW71-3 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5066.5066.3 8.39 8.39 1.274 2 1 1 0 660.0046 1898.0318 T84t TMT10 81 (K) RPPtPCSDPERK (R) RPPT(0.99)PCS(0.0)DPERK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T HIRIP3 62298.3 10 2 178.1 481.23 HUMAN 1 11.6468 12.7034 KKGNAEGSSDEEGKL-p P51858;S132-p KKGNAEGSSDEEGKL 0.239302036884039 0.00586651472949607 -0.402 0.560333333333333 11.8712990738393 32.2516908311796 -0.402 0.560333333333334 0.064993525080814 0.00059543028055735 -2.30952724955695 7.13511416336429 P51858 HDGF P51858.S132.p_HDGF P51858_S132s _1_1_132_132 P51858 P51858|P51858-2|P51858-3 Hepatoma-derived growth factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16772.16772.5 23.36 23.36 1.159 3 1 1 0 1085.7361 5344.6875 S132s TMT10 107 (K) SCVEEPEPEPEAAEGDGDKKGNAEGsSDEEGKLVIDEPAK (E) S(0.0)CVEEPEPEPEAAEGDGDKKGNAEGS(0.99)S(0.0)DEEGKLVIDEPAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HDGF 26901.9 17 4 213.1 437.7 HUMAN 1 -11.8713 32.2517 KKGNSPNSEPPTPKT-p P48634;S383-p KKGNSPNSEPPTPKT 0.58471981560589 0.852037814849465 -0.082 0.023 4.28598227023503 0.977855875246571 -0.082 0.023 0.372736371357093 0.798388756883373 -0.971415677534544 0.268288199360197 P48634 PRRC2A P48634.S383.p_PRRC2A P48634_S383s _1_1_383_383 P48634 P48634|P48634-3|P48634-2|P48634-4 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7676.8090.3 16.15 13.66 1.175 3 1 1 0 707.3836 2040.1693 S383s TMT10 377 (K) KGNSPNsEPPTPK (T) KGNS(0.0)PNS(0.99)EPPT(0.0)PK K:TMT10,s:Phosphorylated S PRRC2A 229315.4 4 7 36.1 882.05 HUMAN 1 -4.286 0.9779 KKGPRTPSPPPPIPE-p Q5T200;S265-p KKGPRTPSPPPPIPE 0.993911734338014 0.435986747030589 -0.00133333333333334 0.0846666666666667 0.0534283653719647 4.80299906013694 -0.00133333333333334 0.0846666666666667 0.987773028598636 0.330902534803309 -0.0160455845996957 1.06762122316505 Q5T200 ZC3H13 Q5T200.S265.p_ZC3H13 Q5T200_S265s _1_1_265_265 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26082.26082.2 16.17 16.17 1.906 2 1 1 0 1084.0931 2087.2153 S265s TMT10 263 (R) TPsPPPPIPEDIALGK (K) T(0.0)PS(0.99)PPPPIPEDIALGK K:TMT10,s:Phosphorylated S ZC3H13 197316.7 5 8 24.1 987.82 HUMAN 1 -0.0534 4.803 KKGPSTPYTKSKRGH-p Q8TAQ2;Y324-p KKGPSTPYTKSKRGH 0.373935912464191 0.00104745705872082 -0.201333333333333 -1.29633333333333 7.91036446862604 51.0204929239579 -0.201333333333333 -1.29633333333333 0.16179442508239 7.90588891119018e-06 -1.619607304183 -16.4001403929998 Q8TAQ2 SMARCC2 Q8TAQ2.Y324.p_SMARCC2 Q8TAQ2_Y324y _1_1_324_324 Q8TAQ2 F8VXC8|Q8TAQ2|Q8TAQ2-3|Q8TAQ2-2 SWI/SNF complex subunit SMARCC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7969.7969.3 11.35 6.68 1.853 4 1 1 0 582.6651 1666.0143 Y324y TMT10 318 (K) KGPSTPyTK (S) KGPS(0.0)T(0.0)PY(0.99)T(0.0)K K:TMT10,y:Phosphorylated Y SMARCC2 133276.4 2 6 499.1 292.05 HUMAN 1 -7.9104 -51.0205 KKGRRNQSVEPKKEE-p J3QKD2;S386-p KKGRRNQSVEPKKEE 0.0686392777398597 0.145122203658151 -0.484666666666667 -0.157 25.0758831498204 11.0402408816995 -0.484666666666667 -0.157 0.00310750391898166 0.0787002137362921 -5.06302135548699 -2.16218179752189 J3QKD2 ZMYND11 J3QKD2.S386.p_ZMYND11 J3QKD2_S386s _1_1_386_386 J3QKD2 J3QKD2|E7ENI9|Q15326-3|Q15326-6|Q15326-2|B7Z2J6 Zinc finger MYND domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19313.19313.5 23.63 23.63 4.58 6 1 1 0 938.6857 4609.4365 S386s TMT10 384 (R) NQsVEPKKEEPEPETEAVSSSQEIPTMPQPIEK (V) NQS(0.99)VEPKKEEPEPET(0.0)EAVS(0.0)S(0.0)S(0.0)QEIPT(0.0)MPQPIEK K:TMT10,s:Phosphorylated S ZMYND11 70498.9 3 2 1992.1 103.71 HUMAN 1 -25.0759 -11.0402 KKGSKKKSGPPAPEE-p Q9NTI5;S1319-p KKGSKKKSGPPAPEE 0.281655667968343 0.00244370527796365 -0.157666666666667 -0.891666666666667 10.4021386416529 40.0681151327992 -0.157666666666667 -0.891666666666667 0.091156183889993 9.84438265874076e-05 -2.05167058354565 -10.1620426026878 Q9NTI5 PDS5B Q9NTI5.S1319.p_PDS5B Q9NTI5_S1319s _1_1_1319_1319 Q9NTI5 Q9NTI5|Q9NTI5-2|Q9NTI5-5 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6949.6949.5 20.43 20.43 15.885 3 1 1 0 742.7792 3629.9065 S1319s TMT10 1317 (K) KKsGPPAPEEEEEEERQSGNTEQK (S) KKS(0.99)GPPAPEEEEEEERQS(0.0)GNT(0.0)EQK K:TMT10,s:Phosphorylated S PDS5B 165919.5 2 13 100.1 597.99 HUMAN 1 -10.4021 -40.0681 KKGSKRKSDRMESTD-p J3QR07;S49-p KKGSKRKSDRMESTD 0.445972173170048 0.000952253650599092 0.117333333333333 -1.33833333333333 6.4680666523668 54.4629396865509 0.117333333333333 -1.33833333333333 0.225524295464669 3.57854127995033e-06 1.36754059640771 -19.0236232800737 J3QR07 YTHDC1 J3QR07.S49.p_YTHDC1 J3QR07_S49s _1_1_49_49 J3QR07 J3QR07|Q96MU7|Q96MU7-2 YTH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4006.4006.4 8.24 4.01 2.355 4 1 1 0 556.0462 2141.1952 S49s TMT10 47 (K) RKsDRMESTDTK (R) RKS(0.99)DRMES(0.0)T(0.0)DT(0.0)K K:TMT10,s:Phosphorylated S YTHDC1 85871.1 2 2 702.1 239.92 HUMAN 1 6.4681 -54.4629 KKGVLGKSPLSALAR-p Q9BQG0-2;S1290-p KKGVLGKSPLSALAR 0.475626913615737 0.0014286003693118 -0.118666666666667 -1.09 5.94214988638456 45.9799432135182 -0.118666666666667 -1.09 0.254556980814148 2.52351376864742e-05 -1.2742512017747 -13.1782077383959 Q9BQG0 MYBBP1A Q9BQG0.2.S1290.p_MYBBP1A Q9BQG0-2_S1290s _1_1_1290_1290 Q9BQG0-2 Q9BQG0-2 Isoform 2 of Myb-binding protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21561.21561.3 12.24 8.27 1.109 2 1 1 0 603.0237 1727.0944 S1290s TMT10 1285 (K) GVLGKsPLSALAR (K) GVLGKS(0.99)PLS(0.0)ALAR K:TMT10,s:Phosphorylated S MYBBP1A 150334.3 6 10 297.1 378.74 HUMAN 1 -5.9421 -45.9799 KKGVPEKSPVLEKSS-p E9PDI4;S191-p KKGVPEKSPVLEKSS 0.568265545283393 0.0504318281101793 -0.0893333333333333 -0.252 4.51908368246033 17.3350391422869 -0.0893333333333334 -0.252 0.353257695739257 0.0184712414699164 -1.01514069211862 -3.3263204064894 E9PDI4 NotFound E9PDI4.S191.p_NotFound E9PDI4_S191s _1_1_191_191 E9PDI4 E9PDI4|O00515 Ladinin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14804.14804.2 12.73 12.73 99 1 1 1 0 975.5662 1870.1617 S191s TMT10 186 (K) GVPEKsPVLEK (S) GVPEKS(1.0)PVLEK K:TMT10,s:Phosphorylated S LAD1 58791 9 3 769.1 228.41 HUMAN 1 -4.5191 -17.335 KKHLRIHSDERPYKC-p Q9NTW7;S381-p KKHLRIHSDERPYKC 0.887361765697267 0.0141565205532139 0.033 -0.565 1.01180926967747 25.6466743652268 0.033 -0.565 0.792171243395022 0.0027247870306136 0.276838040780549 -5.20273252321 Q9NTW7 ZFP64 Q9NTW7.S381.p_ZFP64 Q9NTW7_S381s _1_1_381_381 Q9NTW7 Q9NTW7|Q9NTW7-2 Zinc finger protein 64 homolog, isoforms 3 and 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6107.6107.4 9.35 9.35 9.355 2 1 1 0 421.4726 1602.9004 S381s TMT10 379 (R) IHsDERPYK (C) IHS(0.99)DERPY(0.0)K K:TMT10,s:Phosphorylated S ZFP64 74612 1 5 3993.1 39.5 HUMAN 1 1.0118 -25.6467 KKHSAPSSPNAAKRL-p H3BM45;S92-p KKHSAPSSPNAAKRL 0.365498843349433 0.458020049166311 0.155 -0.177666666666667 8.11405204666913 4.52136657356096 0.155 -0.177666666666667 0.154381336136371 0.353072052825616 1.6549399853882 -1.01537786451575 H3BM45 ANKFN1 H3BM45.S92.p_ANKFN1 H3BM45_S91sS92s_2_2_91_92 H3BM45 H3BM45|Q8N957 Ankyrin repeat and fibronectin type-III domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4983.4983.3 8.8 8.8 2.456 3 2 2 0 681.3533 1882.1114 S91s S92s TMT10 86 (K) KHSAPssPNAAK (R) KHS(0.0)APS(0.99)S(0.99)PNAAK K:TMT10,s:Phosphorylated S ANKFN1 131209.3 3 5 3372.1 52.61 HUMAN 1 8.1141 -4.5214 KKICTLPSPPSPLAS-p Q9UER7;S668-p KKICTLPSPPSPLAS 0.326106298508116 0.543408214995881 0.181 0.102333333333333 9.11386964710696 3.56192070805459 0.181 0.102333333333333 0.122634604636471 0.440360067067099 1.82807618127148 0.832275909035683 Q9UER7 DAXX Q9UER7.S668.p_DAXX Q9UER7_S668sS671s_2_2_668_671 Q9UER7 Q9UER7|Q9UER7-2|Q9UER7-3 Death domain-associated protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.33609.34227.3 14.83 14.83 3.607 7 2 2 0 909.4409 2566.3748 S668s S671s TMT10 663 (K) ICTLPsPPsPLASLAPVADSSTR (V) ICT(0.0)LPS(0.99)PPS(0.99)PLAS(0.0)LAPVADS(0.0)S(0.0)T(0.0)R C:Carbamidomethylation,s:Phosphorylated S DAXX 82112.9 7 13 315.1 368.97 HUMAN 1 9.1139 3.5619 KKIESFGSKSGRTSK-p P30405;S189-p KKIESFGSKSGRTSK 0.835798871639983 0.408269333223645 0.036 0.118 1.50550756191973 5.1784979903128 0.036 0.118 0.707048562768011 0.303494063847894 0.396277794360208 1.13643374168698 P30405 PPIF P30405.S189.p_PPIF P30405_S189s _1_1_189_189 P30405 P30405 Peptidyl-prolyl cis-trans isomerase F, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13170.13170.3 11.18 11.18 11.184 2 1 1 0 554.9864 1582.9772 S189s TMT10 183 (K) KIESFGsK (S) KIES(0.0)FGS(0.99)K K:TMT10,s:Phosphorylated S PPIF 22382.2 1 2 4707.1 27.67 HUMAN 1 1.5055 5.1785 KKIESFGSPKGSVCR-p P49792;S3207-p KKIESFGSPKGSVCR 0.142827912098432 0.225020134237897 0.280333333333333 0.143666666666667 17.2615233189186 8.53199922940263 0.280333333333333 0.143666666666667 0.018786577485983 0.140216808250168 3.31432286076055 1.72676115055259 P49792 RANBP2 P49792.S3207.p_RANBP2 P49792_S3207s _1_1_3207_3207 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13707.13707.2 13.43 6.99 3.148 2 1 1 0 880.5012 1680.0299 S3207s TMT10 3201 (K) KIESFGsPK (G) KIES(0.0)FGS(0.99)PK K:TMT10,s:Phosphorylated S RANBP2 362585.9 13 69 9.1 1298.62 HUMAN 1 17.2615 8.532 KKIIETMSSSKLSNV-p Q96Q89-2;S1789-p KKIIETMSSSKLSNV 0.230359221558201 0.00183185532496094 -0.211 -1.491 12.2515286599759 43.076120081522 -0.211 -1.491 0.0595452515112993 4.9247931246609e-05 -2.37702983591154 -11.6053984451559 Q96Q89 KIF20B Q96Q89.2.S1789.p_KIF20B Q96Q89-2_S1789s _1_1_1789_1789 Q96Q89-2 Q96Q89-2|Q96Q89-3|Q96Q89-5 Isoform 2 of Kinesin-like protein KIF20B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17596.17596.2 11.98 5.76 1.177 4 1 1 0 767.404 1453.8336 S1789s TMT10 1784 (K) IIETMsSSK (L) IIET(0.0)MS(0.99)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S KIF20B 215641.1 3 16 486.1 295.59 HUMAN 1 -12.2515 -43.0761 KKIKKAASPSPQSVR-p A9Z1X7;S747-p KKIKKAASPSPQSVR 0.221440669353428 0.266743427532285 0.188 0.122333333333333 12.6047451914898 7.55710100124094 0.188 0.122333333333333 0.0548940762020041 0.175505164146882 2.44008204630953 1.55775544197186 A9Z1X7 NotFound A9Z1X7.S747.p_NotFound A9Z1X7_S747s _1_1_747_747 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4225.4225.3 11.04 7.49 1.709 3 1 1 0 488.9231 1384.7858 S747s TMT10 745 (K) AAsPSPQSVRR (V) AAS(0.99)PS(0.0)PQS(0.0)VRR s:Phosphorylated S SRRM1 103445.7 24 44 8.1 1346.57 HUMAN 1 12.6047 7.5571 KKIKNENTEGSPQED-p P11388-2;T1270-p KKIKNENTEGSPQED 0.218730142557004 0.410303589436559 0.248 0.084 12.7222346252614 5.14753088553621 0.248 0.084 0.0534289374611115 0.305665843543379 2.46113348412843 1.13079213767149 P11388 TOP2A P11388.2.T1270.p_TOP2A P11388-2_T1270tS1273s_2_2_1270_1273 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21672.21672.4 9.46 9.46 99 2 2 2 0 784.1385 2973.5984 T1270t S1273s TMT10 1265 (K) IKNENtEGsPQEDGVELEGLK (Q) IKNENT(1.0)EGS(1.0)PQEDGVELEGLK K:TMT10,t:Phosphorylated T,s:Phosphorylated S TOP2A 178239.3 1 18 71.2 658.36 HUMAN 1 12.7222 5.1475 KKIMEKKYHNVGLSK-p Q14103;Y244-p KKIMEKKYHNVGLSK 0.506520727045966 0.236885908062401 -0.100333333333333 0.208 5.4516551834904 8.23838891596063 -0.100333333333333 0.208 0.284993189421732 0.150024127050381 -1.1862201915445 1.67594338027094 Q14103 HNRNPD Q14103.Y244.p_HNRNPD Q14103_Y244y _1_1_244_244 Q14103 Q14103|Q14103-2|Q14103-3|Q14103-4 Heterogeneous nuclear ribonucleoprotein D0 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.9434.9434.3 9.96 5.76 9.959 2 1 1 0 605.0153 1733.0677 Y244y TMT10 243 (K) KyHNVGLSK (C) KY(0.99)HNVGLS(0.0)K K:TMT10,y:Phosphorylated Y HNRNPD 38604.6 1 1 342.1 9.96 HUMAN 1 -5.4517 8.2384 KKINPTASLKERLRQ-p Q68DA7-5;S1181-p KKINPTASLKERLRQ 0.171158122502722 0.409210459677038 -0.269 -0.132333333333333 15.2812090383168 5.16470038451599 -0.269 -0.132333333333333 0.0296400612095929 0.30445980265954 -2.93136045103378 -1.13392078780497 Q68DA7 FMN1 Q68DA7.5.S1181.p_FMN1 Q68DA7-5_S1181s _1_1_1181_1181 Q68DA7-5 Q68DA7|H0YM30|Q68DA7-5 Isoform 5 of Formin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13558.13558.3 14.26 4.85 1.716 2 1 1 0 580.3533 1659.0772 S1181s TMT10 1175 (K) KINPTAsLK (E) KINPT(0.0)AS(0.99)LK K:TMT10,s:Phosphorylated S FMN1 132895.4 2 12 727.1 236.56 HUMAN 1 -15.2812 -5.1647 KKIPDPDSDDVSEVD-p A0A0A0MT49;S759-p KKIPDPDSDDVSEVD 0.868689771390984 0.199276631242646 0.028 -0.130333333333333 1.19292495799774 9.21682056555271 0.028 -0.130333333333333 0.75981437228023 0.11976169760602 0.32159526910077 -1.84522088478827 A0A0A0MT49 NotFound A0A0A0MT49.S759.p_NotFound A0A0A0MT49_S759s _1_1_759_759 A0A0A0MT49 A0A0A0MT49|Q9HBD4|P51532|P51532-4|P51532-3|P51532-2|P51532-5 Transcription activator BRG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12535.12535.3 15.01 11.14 2.081 2 1 1 0 885.1285 2573.4026 S759s TMT10 752 (K) KKIPDPDsDDVSEVDAR (H) KKIPDPDS(0.99)DDVS(0.0)EVDAR K:TMT10,s:Phosphorylated S SMARCA4 189484.7 4 5 392.1 331.85 HUMAN 1 1.1929 -9.2168 KKIPIPETPPQTPPQ-p Q969H4;T289-p KKIPIPETPPQTPPQ 0.859564008462243 0.216257875386514 0.037 -0.134333333333333 1.28281353650829 8.75003484561197 0.037 -0.134333333333333 0.744249662453493 0.133351073269881 0.343388387162332 -1.76447809192834 Q969H4 CNKSR1 Q969H4.T289.p_CNKSR1 Q969H4_T289tT293t_2_2_289_293 Q969H4 Q969H4|Q969H4-2|G3V160 Connector enhancer of kinase suppressor of ras 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21724.21724.4 15.91 15.91 8.62 3 2 2 0 774.1525 2933.6613 T289t T293t TMT10 283 (K) KIPIPEtPPQtPPQVLDSPHQR (S) KIPIPET(0.99)PPQT(0.99)PPQVLDS(0.0)PHQR K:TMT10,t:Phosphorylated T CNKSR1 80560.2 5 9 1912.1 107.86 HUMAN 1 1.2828 -8.75 KKIPLKPSPSKKFRS-p Q99755;S458-p KKIPLKPSPSKKFRS 0.552777326044719 0.00443565772038716 -0.118666666666667 -0.551666666666667 4.75172857848449 34.5593933818141 -0.118666666666667 -0.551666666666667 0.334832142774607 0.000349994050432979 -1.05835821710705 -7.93341153615218 Q99755 PIP5K1A Q99755.S458.p_PIP5K1A Q99755_S458s _1_1_458_458 Q99755 A2A3N6|Q99755|A6PW57|Q99755-3|Q99755-4 Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13876.13876.4 11.27 11.27 1.229 2 1 1 0 523.5838 2011.3449 S458s TMT10 452 (K) KIPLKPsPSK (K) KIPLKPS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S PIP5K1A 63088.6 7 3 3553.1 48.31 HUMAN 1 -4.7517 -34.5594 KKISSIQSIVPALEI-p P10809;S256-p KKISSIQSIVPALEI 0.257843559813616 0.145447403079237 0.215666666666667 0.167333333333333 11.1842002004229 11.0295200930453 0.215666666666667 0.167333333333333 0.0761342335401723 0.0788947293576419 2.18841155999799 2.16030485982282 P10809 HSPD1 P10809.S256.p_HSPD1 P10809_S256s _1_1_256_256 P10809 P10809 60 kDa heat shock protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30819.30819.3 14.11 14.11 3.76 3 1 1 0 743.4069 2148.2338 S256s TMT10 251 (K) ISSIQsIVPALEIANAHR (K) IS(0.0)S(0.0)IQS(0.99)IVPALEIANAHR s:Phosphorylated S HSPD1 61224.7 1 7 1165.1 170.59 HUMAN 1 11.1842 11.0295 KKKAGLASPEEEDAV-p Q9UNS1;S1149-p KKKAGLASPEEEDAV 0.342075757494071 0.00679097043458799 -0.161 -0.486 8.65438130566748 31.1200534747303 -0.161 -0.486 0.136320719437447 0.000772671071129201 -1.74853526328351 -6.76901413528997 Q9UNS1 TIMELESS Q9UNS1.S1149.p_TIMELESS Q9UNS1_S1149s _1_1_1149_1149 Q9UNS1 Q9UNS1|Q9UNS1-2 Protein timeless homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16220.16220.5 19.39 19.39 99 1 1 1 0 593.735 2884.6801 S1149s TMT10 1144 (K) KAGLAsPEEEDAVGKEPLK (A) KAGLAS(1.0)PEEEDAVGKEPLK K:TMT10,s:Phosphorylated S TIMELESS 139682.8 11 5 579.1 266.89 HUMAN 1 -8.6544 -31.1201 KKKATETTDEDEDGG-p Q8NB78;T38-p KKKATETTDEDEDGG 0.674428060156492 0.0792603482411338 -0.0703333333333333 -0.33 3.20688755829433 14.6109404418647 -0.0703333333333333 -0.33 0.477871625402936 0.0345864474583102 -0.762129172600087 -2.8040243994859 Q8NB78 KDM1B Q8NB78.T38.p_KDM1B Q8NB78_T38t _1_1_38_38 Q8NB78 Q8NB78|Q8NB78-2 Lysine-specific histone demethylase 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6603.6603.5 15.75 15.75 2.252 4 1 1 0 639.5406 3113.7187 T38t TMT10 32 (K) KKATETtDEDEDGGSEKK (Y) KKAT(0.0)ET(0.0)T(0.99)DEDEDGGS(0.0)EKK K:TMT10,t:Phosphorylated T KDM1B 93523 6 2 2230.1 92.53 HUMAN 1 -3.2069 -14.6109 KKKFHKASQED____-p O00567;S591-p KKKFHKASQED____ 0.758659686129506 0.125548379068969 0.0433333333333333 -0.198333333333333 2.29831268897986 11.884318145652 0.0433333333333333 -0.198333333333333 0.589072475997694 0.0647989823477213 0.57389695585651 -2.31069264943584 O00567 NOP56 O00567.S591.p_NOP56 O00567_S591s _1_1_591_591 O00567 O00567 Nucleolar protein 56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7017.7017.3 7.03 7.03 99 1 1 1 0 500.5814 1419.7633 S591s TMT10 587 (K) FHKAsQED (-) FHKAS(1.0)QED K:TMT10,s:Phosphorylated S NOP56 66448.1 6 12 262.1 396.77 HUMAN 1 2.2983 -11.8843 KKKFRTPSFLKKSKK-p P35611-3;S757-p KKKFRTPSFLKKSKK 0.391150856817222 0.261428548221294 -0.125 0.182666666666667 7.52855812174058 7.67621366216217 -0.125 0.182666666666667 0.176662425095461 0.170757046249665 -1.55325349921937 1.57845758371851 P35611 ADD1 P35611.3.S757.p_ADD1 P35611-3_S757s _1_1_757_757 P35611-3 P35611-3 Isoform 3 of Alpha-adducin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13493.13699.3 7.9 7.9 1.849 2 1 1 0 453.5999 1278.8186 S757s Hydrogen 755 (R) TPsFLKK (S) T(0.0)PS(0.99)FLKK K:TMT10-Lys-Only,s:Phosphorylated S ADD1 84872.1 4 14 264.1 396.09 HUMAN 1 -7.5286 7.6762 KKKGDDQSRQGGAPD-p P49368;S534-p KKKGDDQSRQGGAPD 0.891204575159111 0.351664024480188 0.0253333333333333 0.263666666666667 0.976676318611793 6.01586248522437 0.0253333333333333 0.263666666666667 0.798605631077374 0.250272857074189 0.268017651401019 1.28708193474432 P49368 CCT3 P49368.S534.p_CCT3 P49368_S534s _1_1_534_534 P49368 P49368|P49368-2|B4DUR8 T-complex protein 1 subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.4247.4247.3 8.35 8.35 99 1 1 1 0 871.1074 2531.3417 S534s TMT10 528 (K) KKGDDQsRQGGAPDAGQE (-) KKGDDQS(1.0)RQGGAPDAGQE K:TMT10,s:Phosphorylated S CCT3 61103.4 1 8 2149.1 95.76 HUMAN 1 0.9767 6.0159 KKKGDGISPLREEAA-p Q08AD1;S810-p KKKGDGISPLREEAA 0.200655579876407 0.0392043050534768 -0.237666666666667 -0.299 13.5642088267542 18.8843489513324 -0.237666666666667 -0.299 0.0440128120597095 0.0129290050434249 -2.6132487140586 -3.64033817228556 Q08AD1 CAMSAP2 Q08AD1.S810.p_CAMSAP2 Q08AD1_S810s _1_1_810_810 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12944.12944.4 12.68 12.68 99 1 1 1 0 774.923 3016.7085 S810s TMT10 804 (K) KKGDGIsPLREEAAGAEDEK (V) KKGDGIS(1.0)PLREEAAGAEDEK K:TMT10,s:Phosphorylated S CAMSAP2 169284 3 10 28.2 931.95 HUMAN 1 -13.5642 -18.8843 KKKGVEPSPSPIKPG-p Q92890-1;S281-p KKKGVEPSPSPIKPG 0.137301954068809 0.00662062184564889 0.272 -0.649333333333333 17.6773260406077 31.3140288063316 0.272 -0.649333333333334 0.0170713315062251 0.000738919485836969 3.39725421589321 -6.83064233731545 Q92890 UFD1L Q92890.1.S281.p_UFD1L Q92890-1_S281sS283s_2_2_281_283 Q92890-1 Q92890-1|Q92890-3 Isoform Long of Ubiquitin recognition factor in ER-associated degradation protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12338.12338.5 7.29 7.29 99 2 2 2 0 648.5787 3078.9376 S281s S283s TMT10 275 (K) KKGVEPsPsPIKPGDIKR (G) KKGVEPS(1.0)PS(1.0)PIKPGDIKR K:TMT10,s:Phosphorylated S UFD1 39066.9 3 7 833.1 215.39 HUMAN 1 17.6773 -31.314 KKKHPDASVNFSEFS-p P09429;S35-p KKKHPDASVNFSEFS 0.61884262257463 0.14020172371019 -0.115 0.166666666666667 3.87266633980597 11.2434745128014 -0.115 0.166666666666667 0.409952336525803 0.0751021809017622 -0.892710079923893 2.19780388132645 P09429 HMGB1 P09429.S35.p_HMGB1 P09429_S35s _1_1_35_35 P09429 P09429|Q5T7C4 High mobility group protein B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15996.15996.3 16.85 16.85 2.604 3 1 1 0 787.415 2280.2591 S35s TMT10 30 (K) KHPDAsVNFSEFSK (K) KHPDAS(0.99)VNFS(0.0)EFS(0.0)K K:TMT10,s:Phosphorylated S HMGB1 25064.5 8 1 2675.1 74.3 HUMAN 1 -3.8727 11.2435 KKKIKEKYIDQEELN-p P07900-2;Y406-p KKKIKEKYIDQEELN 0.408838439850386 0.669890446623432 0.120666666666667 -0.0643333333333333 7.1672070186488 2.37818473933716 0.120666666666667 -0.0643333333333334 0.191990304820801 0.578337730042994 1.4902513487021 -0.590941778409559 P07900 HSP90AA1 P07900.2.Y406.p_HSP90AA1 P07900-2_Y406y _1_1_406_406 P07900-2 P07900-2|P08238|Q58FF8|Q14568 Isoform 2 of Heat shock protein HSP 90-alpha GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16593.16644.2 18.31 8.7 99 1 1 1 0 845.4288 1609.8838 Y406y TMT10 406 (K) yIDQEELNK (T) Y(1.0)IDQEELNK K:TMT10,y:Phosphorylated Y HSP90AA1 98729.9 5 2 3.1 124.79 HUMAN 1 7.1672 -2.3782 KKKKAFNSPKTGQNK-p Q9NPC7;S188-p KKKKAFNSPKTGQNK 0.28377835512685 0.00604775327324358 0.733333333333333 -1.78666666666667 10.325834534115 32.0345973868239 0.733333333333333 -1.78666666666667 0.0927719203792219 0.000625950890077697 2.03838029095325 -7.06363878184531 Q9NPC7 MYNN Q9NPC7.S188.p_MYNN Q9NPC7_S188s _1_1_188_188 Q9NPC7 Q9NPC7|Q9NPC7-2|Q9NPC7-3 Myoneurin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8719.8719.3 12.39 7.51 1.768 2 1 1 0 653.6936 1879.1005 S188s TMT10 185 (K) AFNsPKTGQNK (T) AFNS(0.99)PKT(0.0)GQNK K:TMT10,s:Phosphorylated S MYNN 70049.9 1 35 394.3 330.8 HUMAN 1 10.3258 -32.0346 KKKKEKGSETDSAQD-p P30419;S69-p KKKKEKGSETDSAQD 0.982673656696447 0.0339108459381281 -0.00433333333333333 0.310333333333333 0.152398396886545 19.8122404629414 -0.00433333333333334 0.310333333333333 0.965517523430646 0.0104418140204008 -0.0452677287629512 3.83522467196117 P30419 NMT1 P30419.S69.p_NMT1 P30419_S69s _1_1_69_69 P30419 P30419|B7Z8J4 Glycylpeptide N-tetradecanoyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7935.7935.4 9.94 9.94 1.11 3 1 1 0 597.3098 2306.2443 S69s TMT10 66 (K) EKGsETDSAQDQPVK (M) EKGS(0.99)ET(0.0)DS(0.0)AQDQPVK K:TMT10,s:Phosphorylated S NMT1 57147.5 4 3 1576.1 130.17 HUMAN 1 -0.1524 19.8122 KKKKERKSLPEEDVA-p O60832;S21-p KKKKERKSLPEEDVA 0.182735755275441 0.0162340459502675 -0.492666666666667 -0.361666666666667 14.5127950226867 24.7116523912319 -0.492666666666667 -0.361666666666667 0.0353769589564338 0.00337936234729859 -2.78756507298897 -4.96501195288557 O60832 DKC1 O60832.S21.p_DKC1 O60832_S21s _1_1_21_21 O60832 O60832|O60832-2 H/ACA ribonucleoprotein complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29987.29987.5 27.59 27.59 27.595 2 1 1 0 681.9609 3325.8135 S21s TMT10 21 (K) sLPEEDVAEIQHAEEFLIKPESK (V) S(0.99)LPEEDVAEIQHAEEFLIKPES(0.0)K K:TMT10,s:Phosphorylated S DKC1 58129.5 6 1 363.1 342.61 HUMAN 1 -14.5128 -24.7117 KKKKERNSYLGLVSL-p Q5VWQ8;S289-p KKKKERNSYLGLVSL 0.363649608980053 0.608141180610958 -0.151 0.0606666666666667 8.15572940126618 2.93362407964073 -0.151 0.0606666666666667 0.152906891643045 0.50890602437576 -1.66216519301087 0.706800104533316 Q5VWQ8 DAB2IP Q5VWQ8.S289.p_DAB2IP Q5VWQ8_S289s _1_1_289_289 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24137.24137.3 19.84 13.66 4.499 4 1 1 0 757.0696 2189.224 S289s TMT10 286 (K) ERNsYLGLVSLPAASVAGR (Q) ERNS(0.99)Y(0.0)LGLVS(0.0)LPAAS(0.0)VAGR s:Phosphorylated S DAB2IP 132592.9 2 4 281.1 388.28 HUMAN 1 -8.1557 2.9336 KKKKKVLSPTAAKPS-p Q96QC0;S313-p KKKKKVLSPTAAKPS 0.158414346785039 0.188411674756143 -0.246333333333333 -0.175666666666667 16.0306448272692 9.53260593195736 -0.246333333333333 -0.175666666666667 0.0249422436458289 0.111362611507796 -3.0740766227259 -1.8998813494103 Q96QC0 PPP1R10 Q96QC0.S313.p_PPP1R10 Q96QC0_S313s _1_1_313_313 Q96QC0 Q96QC0 Serine/threonine-protein phosphatase 1 regulatory subunit 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20180.20180.2 13.23 13.23 1.604 3 1 1 0 1148.6539 2216.3258 S313s TMT10 311 (K) VLsPTAAKPSPFEGK (T) VLS(0.99)PT(0.0)AAKPS(0.0)PFEGK K:TMT10,s:Phosphorylated S PPP1R10 99398.3 17 2 592.1 264.27 HUMAN 1 -16.0306 -9.5326 KKKKNRHSPDHPGMG-p J3KR33;S243-p KKKKNRHSPDHPGMG 0.322180248290878 0.00568315877546512 0.180666666666667 0.609333333333333 9.20933333751673 32.5329638153494 0.185931821102 0.609333333333333 0.119968344607462 0.000558089200286878 1.84460569089151 7.22861712246293 J3KR33 NotFound J3KR33.S243.p_NotFound J3KR33_S243s _1_1_243_243 J3KR33 J3KR33 Mediator of RNA polymerase II transcription subunit 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3611.3611.4 13.6 13.6 3.088 8 1 1 0 648.5441 2511.1956 S243s TMT10 240 (K) NRHsPDHPGMGSSQASSSSSLR (-) NRHS(0.99)PDHPGMGS(0.0)S(0.0)QAS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)LR s:Phosphorylated S MED19 28141.6 1 3 3453.1 50.6 HUMAN 1 9.2093 32.533 KKKKRKHSEEAEFTP-p Q3B726;S316-p KKKKRKHSEEAEFTP 0.0209430930959409 0.00239426978031754 -0.779333333333333 -0.705333333333333 39.1987000567281 40.2065067559765 -0.779333333333333 -0.705333333333333 0.00012026243538781 9.53562853120765e-05 -9.79877393188084 -10.2246393325283 Q3B726 TWISTNB Q3B726.S316.p_TWISTNB Q3B726_S316s _1_1_316_316 Q3B726 Q3B726 DNA-directed RNA polymerase I subunit RPA43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14829.14829.4 13.99 11.82 2.847 2 1 1 0 570.8113 2200.2581 S316s TMT10 314 (R) KHsEEAEFTPPLK (C) KHS(0.99)EEAEFT(0.0)PPLK K:TMT10,s:Phosphorylated S TWISTNB 37945.1 4 7 540.1 277.01 HUMAN 1 -39.1987 -40.2065 KKKKTIGSPKRIQSP-p Q9UBZ9;S1082-p KKKKTIGSPKRIQSP 0.137289036873108 0.00219928027114295 0.311 -0.987666666666667 17.6934621483354 41.2513306405355 0.311 -0.987666666666667 0.0170080210688667 7.49664483461016e-05 3.40049151055255 -10.7087657476224 Q9UBZ9 REV1 Q9UBZ9.S1082.p_REV1 Q9UBZ9_S1082s _1_1_1082_1082 Q9UBZ9 Q9UBZ9 DNA repair protein REV1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6304.6304.3 7.74 2.28 3.431 2 1 1 0 432.9202 1216.7778 S1082s TMT10 1079 (K) TIGsPKR (I) T(0.0)IGS(0.99)PKR K:TMT10,s:Phosphorylated S REV1 139443.7 3 4 1665.1 122.52 HUMAN 1 17.6935 -41.2513 KKKLDDQSEDEALEL-p Q96AC1-3;S159-p KKKLDDQSEDEALEL 0.464609209836673 0.916228702131754 -0.102333333333333 -0.0143333333333333 6.14228644845252 0.534685131882732 -0.102333333333333 -0.0143333333333333 0.243092385339811 0.884161269508972 -1.30987136516738 -0.15269379659244 Q96AC1 FERMT2 Q96AC1.3.S159.p_FERMT2 Q96AC1-3_S159s _1_1_159_159 Q96AC1-3 Q96AC1-3|Q96AC1-2 Isoform 3 of Fermitin family homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27643.27643.5 33.16 28.17 16.521 9 1 1 0 944.8971 4640.5005 S159s TMT10 153 (K) KKLDDQsEDEALELEGPLITPGSGSIYSSPGLYSK (T) KKLDDQS(0.99)EDEALELEGPLIT(0.0)PGS(0.0)GS(0.0)IY(0.0)S(0.0)S(0.0)PGLY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S FERMT2 79301.6 7 1 1095.1 178.25 HUMAN 1 -6.1423 -0.5347 KKKLEFGSPKGRSGS-p Q8WYL5;S576-p KKKLEFGSPKGRSGS 0.222545488651393 0.00714231278100688 -0.221333333333333 -0.478666666666667 12.5536465902799 30.7177260377584 -0.221333333333333 -0.478666666666667 0.0555437683476638 0.000847671137856081 -2.43093883818216 -6.64263848726204 Q8WYL5 SSH1 Q8WYL5.S576.p_SSH1 Q8WYL5_S576s _1_1_576_576 Q8WYL5 Q8WYL5|Q8WYL5-4|Q8WYL5-5|Q8WYL5-2 Protein phosphatase Slingshot homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12989.12989.4 11.04 6.69 99 1 1 1 0 508.311 1950.2558 S576s TMT10 570 (K) KKLEFGsPK (G) KKLEFGS(1.0)PK K:TMT10,s:Phosphorylated S SSH1 116536 5 3 1598.1 128.84 HUMAN 1 -12.5536 -30.7177 KKKLPSDSGDLEALE-p O60524;S833-p KKKLPSDSGDLEALE 0.130343131685262 0.0767925571274892 -0.634333333333333 0.267 18.298897749973 14.7892643632456 -0.634333333333333 0.267 0.0147948383714104 0.0331950680795385 -3.52301098541431 2.83720060970391 O60524 NEMF O60524.S833.p_NEMF O60524_S833s _1_1_833_833 O60524 O60524|O60524-3|O60524-5 Nuclear export mediator factor NEMF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20329.20329.3 13.43 13.43 1.243 2 1 1 0 776.0882 2246.2847 S833s TMT10 828 (K) KLPSDsGDLEALEGK (D) KLPS(0.0)DS(0.99)GDLEALEGK K:TMT10,s:Phosphorylated S NEMF 123408.6 1 4 1429.1 143.12 HUMAN 1 -18.2989 14.7893 KKKLRHASGANITNA-p P42345;S1821-p KKKLRHASGANITNA 0.635993227924701 0.0433461951559448 0.108 -0.327666666666667 3.66451437620177 18.2627920589633 0.108 -0.327666666666667 0.430079321986704 0.0149183500744793 0.852432215152316 -3.51271707287324 P42345 MTOR P42345.S1821.p_MTOR P42345_S1821s _1_1_1821_1821 P42345 P42345|B1AKP8 Serine/threonine-protein kinase mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18777.18777.4 28.22 28.22 2.259 20 1 1 0 1326.375 5222.5097 S1821s TMT10 1819 (R) HAsGANITNATTAATTAATATTTASTEGSNSESEAESTENSPTPSPLQK (K) HAS(0.99)GANIT(0.0)NAT(0.0)T(0.0)AAT(0.0)T(0.0)AAT(0.0)AT(0.0)T(0.0)T(0.0)AS(0.0)T(0.0)EGS(0.0)NS(0.0)ES(0.0)EAES(0.0)T(0.0)ENS(0.0)PT(0.0)PS(0.0)PLQK K:TMT10,s:Phosphorylated S MTOR 290940.5 3 3 571.1 269.24 HUMAN 1 3.6645 -18.2628 KKKNKEGSGDGGRAE-p P26639;S39-p KKKNKEGSGDGGRAE 0.361131241199818 0.653850029053871 0.127666666666667 -0.049 8.22118340804868 2.52107718575926 0.127666666666667 -0.049 0.150619658709722 0.559618781369258 1.67350977131901 -0.621258674855652 P26639 TARS P26639.S39.p_TARS P26639_S39s _1_1_39_39 P26639 P26639-2|D6RDJ6|D6RCA5 Threonine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19851.19851.3 10.65 5.78 8.879 4 1 1 0 1049.8492 3067.5638 S39s TMT10 35 (K) NKEGsGDGGRAELNPWPEYIYTR (L) NKEGS(0.99)GDGGRAELNPWPEY(0.0)IY(0.0)T(0.0)R K:TMT10,s:Phosphorylated S TARS 84346.4 2 2 3880.1 41.42 HUMAN 1 8.2212 -2.5211 KKKNLDCSRSTRSSK-p Q03188;S634-p KKKNLDCSRSTRSSK 0.305627585854732 0.00558876802431973 0.270333333333333 -0.644666666666667 9.65055834496434 32.643893920863 0.270333333333333 -0.644666666666667 0.108378756934672 0.000544014665982099 1.92105919909763 -7.26577454573343 Q03188 CENPC Q03188.S634.p_CENPC Q03188_S634s _1_1_634_634 Q03188 Q03188 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4059.4059.3 8.09 8.09 8.092 3 1 1 0 473.2208 1337.6793 S634s TMT10 630 (K) NLDCsRSTR (S) NLDCS(0.99)RS(0.0)T(0.0)R C:Carbamidomethylation,s:Phosphorylated S CENPC 107459.5 1 20 209.1 442.77 HUMAN 1 9.6506 -32.6439 KKKRGPRTPPITTKE-p Q5T200;T1033-p KKKRGPRTPPITTKE 0.893810515246054 0.521698959906601 -0.0196666666666667 0.0613333333333334 0.952515841578365 3.79765754527845 -0.0196666666666667 0.0613333333333334 0.803060779177463 0.417094291013597 -0.261924744500907 0.878105251183661 Q5T200 ZC3H13 Q5T200.T1033.p_ZC3H13 Q5T200_T1033t _1_1_1033_1033 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16857.17064.4 23.17 23.17 3.147 3 1 1 0 699.6115 2715.4574 T1033t Hydrogen 1030 (R) GPRtPPITTKEELVEMCNGK (N) GPRT(0.99)PPIT(0.0)T(0.0)KEELVEMCNGK K:TMT10-Lys-Only,C:Carbamidomethylation,t:Phosphorylated T ZC3H13 197316.7 38 21 24.1 987.82 HUMAN 1 -0.9525 3.7977 KKKRLSQSDEDVIRL-p Q9H7D7;S123-p KKKRLSQSDEDVIRL 0.582330070632346 0.00637911671662091 -0.0936666666666667 0.499333333333333 4.32347785036769 31.5900197644481 -0.0936666666666667 0.499333333333333 0.369532138208993 0.000693422650289809 -0.978479367876098 6.91912196507115 Q9H7D7 WDR26 Q9H7D7.S123.p_WDR26 Q9H7D7_S123s _1_1_123_123 Q9H7D7 Q9H7D7|Q9H7D7-2|Q9H7D7-4|Q9H7D7-3 WD repeat-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9953.9953.3 13.84 8.12 1.801 2 1 1 0 542.9389 1546.8387 S123s TMT10 119 (K) RLSQsDEDVIR (L) RLS(0.0)QS(0.99)DEDVIR s:Phosphorylated S WDR26 73092.6 2 2 2543.1 79.17 HUMAN 1 -4.3235 31.59 KKKRLVQSPNSYFMD-p P42677;S27-p KKKRLVQSPNSYFMD 0.314226185169244 0.143341182728233 -0.152 0.162 9.40723261107106 11.112908202484 -0.152 0.162 0.114624311191506 0.0773943362069206 -1.87888333059189 2.17490962451145 P42677 RPS27 P42677.S27.p_RPS27 P42677_S27s _1_1_27_27 P42677 H0YMV8|C9JLI6|P42677|Q71UM5|Q5T4L4 40S ribosomal protein S27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22391.22391.2 10.5 10.5 3.642 3 1 1 0 918.9403 1756.9141 S27s Hydrogen 24 (R) LVQsPNSYFMDVK (C) LVQS(0.99)PNS(0.0)Y(0.0)FMDVK K:TMT10-Lys-Only,s:Phosphorylated S RPS27 9803.3 6 2 3354.1 53.07 HUMAN 1 -9.4072 11.1129 KKKRRKGSGSEQEGE-p Q6PD62;S941-p KKKRRKGSGSEQEGE 0.239758692517376 0.0104546087091736 -0.214333333333333 0.848333333333333 11.8557063748563 27.7924559035303 -0.214333333333333 0.848333333333333 0.0652272940944826 0.00166247226859736 -2.30676679941232 5.77930995501357 Q6PD62 CTR9 Q6PD62.S941.p_CTR9 Q6PD62_S941s _1_1_941_941 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3791.3791.4 12.44 12.44 1.11 2 1 1 0 708.5981 2751.4112 S941s TMT10 938 (R) RKGsGSEQEGEDEEGGERK (K) RKGS(0.99)GS(0.0)EQEGEDEEGGERK K:TMT10,s:Phosphorylated S CTR9 134412.8 4 2 152.1 508.81 HUMAN 1 -11.8557 27.7925 KKKTEDMSDLPCESQ-p Q8TC44;S414-p KKKTEDMSDLPCESQ 0.301242795229768 0.0897898459702056 0.153 0.237 9.78111285731944 13.8536628779976 0.153 0.237 0.105169234852603 0.0411750098941153 1.94370615729629 2.66451170955278 Q8TC44 POC1B Q8TC44.S414.p_POC1B Q8TC44_S414s _1_1_414_414 Q8TC44 Q8TC44|Q8TC44-2|Q8IU52 POC1 centriolar protein homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10351.10351.4 11.04 6.38 1.323 3 1 1 0 648.5751 2511.315 S414s TMT10 408 (K) KKTEDMsDLPCESQR (S) KKT(0.0)EDMS(0.99)DLPCES(0.0)QR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S POC1B 54237.4 2 5 2658.1 74.93 HUMAN 1 9.7811 13.8537 KKKTRYDSGQDLDEE-p Q99615;S449-p KKKTRYDSGQDLDEE 0.0507410919483046 0.00999727646266983 -0.533666666666667 -0.460666666666667 28.4683351917753 28.1010039313213 -0.533666666666667 -0.460666666666667 0.00142287412183729 0.00154845863006517 -5.97931256875202 -5.8659891575071 Q99615 DNAJC7 Q99615.S449.p_DNAJC7 Q99615_S449s _1_1_449_449 Q99615 Q99615|Q99615-2 DnaJ homolog subfamily C member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27822.27822.3 14.87 14.87 2.411 3 1 1 0 1182.8577 3466.5932 S449s TMT10 445 (K) TRYDsGQDLDEEGMNMGDFDPNNIFK (A) T(0.0)RY(0.0)DS(0.99)GQDLDEEGMNMGDFDPNNIFK K:TMT10,s:Phosphorylated S DNAJC7 57238.6 2 2 3074.1 61.42 HUMAN 1 -28.4683 -28.101 KKKVEAKSIFDDDMD-p Q641Q2;S1289-p KKKVEAKSIFDDDMD 0.693940595790396 0.0147104912964376 0.081 0.843666666666667 2.97692357010602 25.3761061863366 0.081 0.843666666666667 0.50385740196601 0.00289994246370208 0.715721306311514 5.13313516703831 Q641Q2 FAM21A Q641Q2.S1289.p_FAM21A Q641Q2_S1289s _1_1_1289_1289 Q641Q2 Q641Q2|Q641Q2-2 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34122.34122.3 15.63 12.97 7.661 3 1 1 0 848.0656 2462.2161 S1289s TMT10 1289 (K) sIFDDDMDDIFSSGIQAK (T) S(0.99)IFDDDMDDIFS(0.0)S(0.0)GIQAK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 1 65 12.1 1178.3 HUMAN 1 2.9769 25.3761 KKKVLSDSEDEEKDA-p Q8WWQ0;S1283-p KKKVLSDSEDEEKDA 0.435900111186314 0.00819640833915464 0.148333333333333 -0.527666666666667 6.63998689131517 29.6856986000636 0.148333333333333 -0.527666666666667 0.216771064779779 0.00107505365484744 1.39783565646452 -6.32717283841496 Q8WWQ0 PHIP Q8WWQ0.S1283.p_PHIP Q8WWQ0_S1283s _1_1_1283_1283 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12058.12058.4 13.58 9.43 1.263 5 1 1 0 762.1348 2965.5569 S1283s TMT10 1278 (K) KVLSDsEDEEKDADVPGTSTR (K) KVLS(0.0)DS(0.99)EDEEKDADVPGT(0.0)S(0.0)T(0.0)R K:TMT10,s:Phosphorylated S PHIP 208454.1 1 11 108.1 577.05 HUMAN 1 6.64 -29.6857 KKLEGSPSPEAELSP-p Q92628;S158-p KKLEGSPSPEAELSP 0.259714685593013 0.0332666986005803 -0.209666666666667 0.284666666666667 11.1083482738926 19.9249774657307 -0.209666666666667 0.284666666666667 0.0774756400223164 0.0101742464528555 -2.17510198519721 3.85927419208334 Q92628 KIAA0232 Q92628.S158.p_KIAA0232 Q92628_S158s _1_1_158_158 Q92628 Q92628 Uncharacterized protein KIAA0232 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16421.16421.4 17.09 18.82 2.276 3 1 1 0 626.8463 2424.3953 S158s TMT10 152 (K) KLEGSPsPEAELSPPAK (D) KLEGS(0.0)PS(0.99)PEAELS(0.0)PPAK K:TMT10,s:Phosphorylated S KIAA0232 157125.3 3 1 568.1 270.65 HUMAN 1 -11.1083 19.925 KKLERLESEDDSLGW-p Q9Y6R4;S499-p KKLERLESEDDSLGW 0.708105602459154 0.554743243006358 0.0913333333333333 -0.101333333333333 2.81762751111459 3.44786630127729 0.0913333333333333 -0.101333333333333 0.522681644558211 0.452077996776832 0.683120555425921 -0.809875434552657 Q9Y6R4 MAP3K4 Q9Y6R4.S499.p_MAP3K4 Q9Y6R4_S499sS503s_2_2_499_503 Q9Y6R4 Q9Y6R4 Mitogen-activated protein kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25835.25835.4 10.86 6.5 10.861 5 2 2 0 914.9218 3496.7385 S499s S503s TMT10 493 (K) KLERLEsEDDsLGWGAPDWSTEAGFSR (H) KLERLES(0.99)EDDS(0.99)LGWGAPDWS(0.0)T(0.0)EAGFS(0.0)R K:TMT10,s:Phosphorylated S MAP3K4 183393.1 1 11 1091.1 179.07 HUMAN 1 2.8176 -3.4479 KKLERMYSVDRVSDD-p Q6X4W1;S204-p KKLERMYSVDRVSDD 0.348991763309836 0.0300127052437527 -0.171 -0.291333333333333 8.49549568190397 20.6038474385604 -0.171 -0.291333333333333 0.141400332862345 0.00870192340227328 -1.72102664193883 -4.00586395951622 Q6X4W1 NSMF Q6X4W1.S204.p_NSMF Q6X4W1_S204s _1_1_204_204 Q6X4W1 Q6X4W1|Q6X4W1-2 NMDA receptor synaptonuclear signaling and neuronal migration factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20413.20413.3 11.09 6.6 3.479 3 1 1 0 658.9932 1894.9894 S204s TMT10 202 (R) MYsVDRVSDDIPIR (T) MY(0.0)S(0.99)VDRVS(0.0)DDIPIR s:Phosphorylated S NSMF 60598.6 1 1 4980.1 24.27 HUMAN 1 -8.4955 -20.6038 KKLERNLSFEIKKVP-p Q05209;S435-p KKLERNLSFEIKKVP 0.505812812090585 0.123059088406617 -0.123333333333333 -0.243 5.46434152358959 12.0018758763013 -0.123333333333333 -0.243 0.284161899801722 0.0630684869835404 -1.18851164973786 -2.331503777299 Q05209 PTPN12 Q05209.S435.p_PTPN12 Q05209_S435s _1_1_435_435 Q05209 Q05209 Tyrosine-protein phosphatase non-receptor type 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19596.19596.3 12.17 12.17 99 1 1 1 0 582.6788 1666.0507 S435s TMT10 433 (R) NLsFEIKK (V) NLS(1.0)FEIKK K:TMT10,s:Phosphorylated S PTPN12 88960.6 5 4 644.1 254.82 HUMAN 1 -5.4643 -12.0019 KKLGAQASPGSRQEG-p Q5D1E8;S386-p KKLGAQASPGSRQEG 0.55663840787346 0.0245293871244246 -0.0806666666666667 -0.333333333333333 4.69764488900476 21.9190245389565 -0.0806666666666667 -0.333333333333333 0.339027955852499 0.00642832086464712 -1.04834677777096 -4.29891240780333 Q5D1E8 ZC3H12A Q5D1E8.S386.p_ZC3H12A Q5D1E8_S386s _1_1_386_386 Q5D1E8 Q5D1E8 Endoribonuclease ZC3H12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12063.12063.3 19.05 14.08 2 6 1 1 0 881.1046 2561.3269 S386s TMT10 381 (K) LGAQAsPGSRQEGLTQTYAPSGR (S) LGAQAS(0.99)PGS(0.0)RQEGLT(0.0)QT(0.0)Y(0.0)APS(0.0)GR s:Phosphorylated S ZC3H12A 66325.5 3 4 2144.1 95.88 HUMAN 1 -4.6976 -21.919 KKLGILGSHEDLSKL-p Q9Y210;S815-p KKLGILGSHEDLSKL 0.853856477511624 0.0287347459547049 0.033 0.344333333333333 1.33015286844036 20.8752628149907 0.033 0.344333333333333 0.73618118400636 0.00817473566716728 0.354759696511643 4.06534175359584 Q9Y210 TRPC6 Q9Y210.S815.p_TRPC6 Q9Y210_S815s _1_1_815_815 Q9Y210 Q9Y210|Q9Y210-3|E9PJN4|Q9Y210-2 Short transient receptor potential channel 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17245.17245.3 17.14 17.14 5.634 2 1 1 0 722.0834 2084.2683 S815s TMT10 809 (K) KLGILGsHEDLSK (L) KLGILGS(0.99)HEDLS(0.0)K K:TMT10,s:Phosphorylated S TRPC6 107180.3 3 1 4529.1 30.29 HUMAN 1 1.3302 20.8753 KKLGVSVSPSRARRR-p E7ERS3;S558-p KKLGVSVSPSRARRR 0.568417101345875 0.277172364749338 0.096 0.128 4.51554266971867 7.34191630716013 0.096 0.128 0.353545841259866 0.184420149303442 1.01447974033948 1.52030023832938 E7ERS3 ZC3H18 E7ERS3.S558.p_ZC3H18 E7ERS3_S558s _1_1_558_558 E7ERS3 E7ERS3|Q86VM9|Q86VM9-2 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11226.11226.4 13.17 13.17 2.118 3 1 1 0 392.7292 1487.931 S558s TMT10 552 (K) KLGVSVsPSR (A) KLGVS(0.0)VS(0.99)PS(0.0)R K:TMT10,s:Phosphorylated S ZC3H18 109165.8 28 12 157.1 499.97 HUMAN 1 4.5155 7.3419 KKLIDLESPTPESQK-p O43166;S1549-p KKLIDLESPTPESQK 0.366525683885644 0.0191420765590183 -0.147666666666667 -0.367 8.0905378235647 23.6250954964668 -0.147666666666667 -0.367 0.155219477665662 0.00434000720352623 -1.65086294871758 -4.69832563145562 O43166 SIPA1L1 O43166.S1549.p_SIPA1L1 O43166_S1549s _1_1_1549_1549 O43166 O43166|O43166-2|O43166-3|F5GYF8 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19408.19408.3 17.72 17.72 1.789 3 1 1 0 784.7728 2272.3367 S1549s TMT10 1543 (K) KLIDLEsPTPESQK (S) KLIDLES(0.99)PT(0.0)PES(0.0)QK K:TMT10,s:Phosphorylated S SIPA1L1 201223.1 5 24 46.1 777.88 HUMAN 1 -8.0905 -23.6251 KKLIESLSPDFCHQN-p Q9H6R7;S468-p KKLIESLSPDFCHQN 0.104738648324438 0.00515478121615231 -0.298666666666667 -0.559 20.6555586513718 33.2865193472399 -0.298666666666667 -0.559 0.00859892448169588 0.000469189263195766 -4.02107424523192 -7.48421100249031 Q9H6R7 C2orf44 Q9H6R7.S468.p_C2orf44 Q9H6R7_S468s _1_1_468_468 Q9H6R7 Q9H6R7|Q9H6R7-2 WD repeat and coiled-coil-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21565.21565.3 22.94 22.94 2.534 2 1 1 0 742.706 2146.1367 S468s TMT10 463 (K) LIESLsPDFCHQNK (G) LIES(0.0)LS(0.99)PDFCHQNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WDCP 80332.2 4 1 2288.1 89.58 HUMAN 1 -20.6556 -33.2865 KKLKRKQSVNISLSG-p O14893;S81-p KKLKRKQSVNISLSG 0.84768925371821 0.0449094045798997 0.0296666666666667 0.266333333333333 1.38967402960301 18.0366838494284 0.0296666666666667 0.266333333333333 0.726160459147685 0.0157156234713399 0.368956941968003 3.46684767964479 O14893 GEMIN2 O14893.S81.p_GEMIN2 O14893_S81s _1_1_81_81 O14893 O14893|O14893-2|O14893-3|G5EA29 Gem-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25628.25628.4 25.85 26.45 1.211 8 1 1 0 1147.3281 4506.324 S81s TMT10 79 (R) KQsVNISLSGCQPAPEGYSPTLQWQQQQVAQFSTVR (Q) KQS(0.99)VNIS(0.0)LS(0.0)GCQPAPEGY(0.0)S(0.0)PT(0.0)LQWQQQQVAQFS(0.0)T(0.0)VR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GEMIN2 32041 13 3 1657.1 123.25 HUMAN 1 1.3897 18.0367 KKLLELDSFLKEPIL-p P61289-2;S43-p KKLLELDSFLKEPIL 0.217881510859134 0.00985240951463799 -0.338 0.540333333333333 12.7511681907982 28.2311926347983 -0.338 0.540333333333333 0.0530741663019878 0.00150272923846803 -2.46632395325169 5.90285980192154 P61289 PSME3 P61289.2.S43.p_PSME3 P61289-2_S43s _1_1_43_43 P61289-2 P61289-2|P61289-3|K9J957 Isoform 2 of Proteasome activator complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30428.30428.3 11.79 5.72 99 1 1 1 0 658.3953 1893.2028 S43s TMT10 37 (K) KLLELDsFLK (E) KLLELDS(1.0)FLK K:TMT10,s:Phosphorylated S PSME3 31057.2 1 3 2122.1 96.8 HUMAN 1 -12.7512 28.2312 KKLMHSNSLNNSNIP-p P27815;S346-p KKLMHSNSLNNSNIP 0.116277968689573 0.701054130123939 -0.35 0.037 19.4533487169263 2.12038619174856 -0.35 0.037 0.0113413597956208 0.613707429457906 -3.76260284179015 0.535236852913811 P27815 PDE4A P27815.S346.p_PDE4A P27815_S346s _1_1_346_346 P27815 P27815|P27815-7 cAMP-specific 3',5'-cyclic phosphodiesterase 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11860.11860.3 11.55 11.55 3.695 3 1 1 0 635.9785 1825.954 S346s TMT10 341 (K) LMHSNsLNNSNIPR (F) LMHS(0.0)NS(0.99)LNNS(0.0)NIPR s:Phosphorylated S PDE4A 98769 1 1 6460.1 11.55 HUMAN 1 -19.4533 2.1204 KKLNFSISPPTFVSG-p Q68DQ2;S655-p KKLNFSISPPTFVSG 0.148266672319898 0.00388507065497343 -0.284 -0.642666666666667 16.7843940495034 35.5905944881723 -0.284 -0.642666666666667 0.0209681731886075 0.000276019999773176 -3.22028912395038 -8.31419309991871 Q68DQ2 CRYBG3 Q68DQ2.S655.p_CRYBG3 Q68DQ2_S655s _1_1_655_655 Q68DQ2 Q68DQ2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33603.33603.3 8.21 8.21 1.284 5 1 1 0 959.5375 2796.6301 S655s TMT10 649 (K) KLNFSIsPPTFVSGVGMLSK (L) KLNFS(0.0)IS(0.99)PPT(0.0)FVS(0.0)GVGMLS(0.0)K K:TMT10,s:Phosphorylated S CRYBG3 333308.2 1 7 582.1 265.87 HUMAN 1 -16.7844 -35.5906 KKLNLTLSPAKKQPV-p Q9UKL3;S567-p KKLNLTLSPAKKQPV 0.102728705875057 0.000952253650599092 -0.433 -2.15266666666667 20.9036764200651 61.909379817549 -0.433 -2.15266666666667 0.00812142724340935 6.44261260927706e-07 -4.07562930703495 -26.1783579152538 Q9UKL3 CASP8AP2 Q9UKL3.S567.p_CASP8AP2 Q9UKL3_S567s _1_1_567_567 Q9UKL3 Q9UKL3|A0A087WTW5 CASP8-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19863.19863.3 15.15 15.15 3.625 2 1 1 0 618.0483 1772.1613 S567s TMT10 561 (K) KLNLTLsPAK (K) KLNLT(0.0)LS(0.99)PAK K:TMT10,s:Phosphorylated S CASP8AP2 224993 4 3 740.1 234.21 HUMAN 1 -20.9037 -61.9094 KKLNSEYSMAETLVG-p Q8TD19;S206-p KKLNSEYSMAETLVG 0.410572564475443 0.933170278887016 -0.149333333333333 -0.013 7.12978465542049 0.42402431904173 -0.149333333333333 -0.013 0.193651798365893 0.9069797027079 -1.48371275689538 -0.122415057689015 Q8TD19 NEK9 Q8TD19.S206.p_NEK9 Q8TD19_S206s _1_1_206_206 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30117.30117.3 16.31 15.69 1.132 8 1 1 0 1321.6588 3882.9935 S206s TMT10 200 (K) KLNSEYsMAETLVGTPYYMSPELCQGVK (Y) KLNS(0.0)EY(0.0)S(0.99)MAET(0.0)LVGT(0.0)PY(0.0)Y(0.0)MS(0.0)PELCQGVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NEK9 108935.2 8 3 224.1 425.83 HUMAN 1 -7.1298 -0.424 KKLPAARSEDGRALS-p Q8N3E9;S489-p KKLPAARSEDGRALS 0.625077958399097 0.0341560215963654 0.081 0.272666666666667 3.78975000426579 19.7598744507489 0.081 0.272666666666667 0.417854419177825 0.0105684806096374 0.8767205736364 3.82408166903762 Q8N3E9 PLCD3 Q8N3E9.S489.p_PLCD3 Q8N3E9_S489s _1_1_489_489 Q8N3E9 Q8N3E9 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5821.5821.3 8.21 5.38 99 1 1 1 0 579.9856 1657.975 S489s TMT10 483 (K) KLPAARsEDGR (A) KLPAARS(1.0)EDGR K:TMT10,s:Phosphorylated S PLCD3 90169.7 1 5 1567.1 131.06 HUMAN 1 3.7898 19.7599 KKLSLSLSPSPQTGK-p Q96R06;S12-p KKLSLSLSPSPQTGK 0.981790525447386 0.0115600532326859 -0.00366666666666667 -0.427666666666667 0.158222725751872 27.1042808668314 -0.00366666666666666 -0.427666666666667 0.964223534521022 0.00194792357314683 -0.046967898442715 -5.58948547740034 Q96R06 SPAG5 Q96R06.S12.p_SPAG5 Q96R06_S12s _1_1_12_12 Q96R06 Q96R06|J3QRV8 Sperm-associated antigen 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21152.21152.3 14.64 14.64 1.266 6 1 1 0 775.421 2244.2786 S12s TMT10 7 (K) LSLSLsPSPQTGKPSMR (T) LS(0.0)LS(0.0)LS(0.99)PS(0.0)PQT(0.0)GKPS(0.0)MR K:TMT10,s:Phosphorylated S SPAG5 135788.8 1 1 612.1 261.64 HUMAN 1 -0.1582 -27.1043 KKLSVPTSDEEDEVP-p Q8NE71;S109-p KKLSVPTSDEEDEVP 0.299216657545411 0.851876159789992 0.148166666666667 0.0193333333333334 9.85359937595951 0.979065712116732 0.148166666666667 0.0193333333333334 0.103428460978268 0.798166376524695 1.9562865409843 0.268592626185539 Q8NE71 ABCF1 Q8NE71.S109.p_ABCF1 Q8NE71_T108tS109s_2_2_108_109 Q8NE71 Q8NE71|Q8NE71-2 ATP-binding cassette sub-family F member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19459.19459.3 16.9 16.9 3.69 3 2 2 0 862.084 2424.3022 T108t S109s TMT10 104 (K) LSVPtsDEEDEVPAPKPR (G) LS(0.0)VPT(0.99)S(0.99)DEEDEVPAPKPR K:TMT10,t:Phosphorylated T,s:Phosphorylated S ABCF1 96380.4 37 10 203.1 449.36 HUMAN 2 9.8536 0.9791 KKMADTSSMDEDFES-p Q8NFA0;S1588-p KKMADTSSMDEDFES 0.252651211577592 0.0685656559337336 -0.167 -0.251333333333333 11.3930008695615 15.4820495841511 -0.167 -0.251333333333333 0.0725604409124128 0.0283005608036444 -2.22510868797502 -2.96734528771662 Q8NFA0 USP32 Q8NFA0.S1588.p_USP32 Q8NFA0_S1588s _1_1_1588_1588 Q8NFA0 Q8NFA0|K7EQL6 Ubiquitin carboxyl-terminal hydrolase 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18646.18646.4 14.94 14.94 1.202 5 1 1 0 692.3192 2686.2831 S1588s TMT10 1583 (K) MADTSsMDEDFESDYKK (Y) MADT(0.0)S(0.0)S(0.99)MDEDFES(0.0)DY(0.0)KK K:TMT10,s:Phosphorylated S USP32 183934.5 10 7 1352.1 150.83 HUMAN 1 -11.393 -15.482 KKMLGEDSDEEEEMD-p A0A087X0M4;S258-p KKMLGEDSDEEEEMD 0.988589863314434 0.780131789142646 -0.00266666666666668 0.0296666666666667 0.101666755058933 1.49215673291521 -0.00266666666666669 0.0296666666666667 0.976862244382857 0.709225474793837 -0.0303679081372087 0.393107297410681 A0A087X0M4 NotFound A0A087X0M4.S258.p_NotFound A0A087X0M4_S258s _1_1_258_258 A0A087X0M4 Q9BWU0|A0A087X0M4 Kanadaptin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15136.15136.2 20.03 20.03 8.339 3 1 1 0 1155.9434 2230.9165 S258s TMT10 253 (K) MLGEDsDEEEEMDTSER (K) MLGEDS(0.99)DEEEEMDT(0.0)S(0.0)ER s:Phosphorylated S SLC4A1AP 83630.7 20 3 455.1 307.39 HUMAN 1 -0.1017 1.4922 KKMLSEGSVGEVQWE-p Q9NSC5;S179-p KKMLSEGSVGEVQWE 0.780946211493183 0.099936180582509 0.0406666666666667 0.253333333333333 2.06340326353806 13.2216953543541 0.0406666666666667 0.253333333333333 0.621812822774719 0.047624503884902 0.522797809750703 2.549665520366 Q9NSC5 HOMER3 Q9NSC5.S179.p_HOMER3 Q9NSC5_S176sS179s_2_2_176_179 Q9NSC5 Q9NSC5|Q9NSC5-2|Q9NSC5-5 Homer protein homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35152.35152.4 15.33 15.33 15.33 3 2 2 0 948.458 3630.8717 S176s S179s TMT10 173 (K) KMLsEGsVGEVQWEAEFFALQDSNNK (L) KMLS(0.99)EGS(0.99)VGEVQWEAEFFALQDS(0.0)NNK K:TMT10,s:Phosphorylated S HOMER3 39835.6 2 6 1577.1 130.16 HUMAN 1 2.0634 13.2217 KKMPLDLSPLATPII-p P15336;S112-p KKMPLDLSPLATPII 0.466667919827382 0.643856613423368 0.122666666666667 0.055 6.10775857076078 2.60658997810473 0.122666666666667 0.055 0.245032754958847 0.548707633679459 1.30373721279373 0.639224152610841 P15336 ATF2 P15336.S112.p_ATF2 P15336_S112s _1_1_112_112 P15336 P15336|P15336-5|P15336-4|E9PBF9|B8ZZU6|E9PEK8|P15336-7|P15336-3 Cyclic AMP-dependent transcription factor ATF-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30829.30829.3 17.01 13.79 3.495 2 1 1 0 735.0937 2123.3026 S112s TMT10 106 (K) KMPLDLsPLATPIIR (S) KMPLDLS(0.99)PLAT(0.0)PIIR K:TMT10,s:Phosphorylated S ATF2 54821.7 11 3 1174.1 169.92 HUMAN 1 6.1078 2.6066 KKMSQPGSPSPKTPT-p F5GWX5;S1528-p KKMSQPGSPSPKTPT 0.136456957986583 0.0925322129540486 -0.266333333333333 -0.187 17.7362308323822 13.6712893293938 -0.266333333333333 -0.187 0.016841350590388 0.0429408925319654 -3.40907889501218 -2.63122870779646 F5GWX5 CHD4 F5GWX5.S1528.p_CHD4 F5GWX5_S1528s _1_1_1528_1528 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7539.7539.3 14.18 10.91 1.348 3 1 1 0 637.6844 1831.0715 S1528s TMT10 1522 (K) KMSQPGsPSPK (T) KMS(0.0)QPGS(0.99)PS(0.0)PK K:TMT10,s:Phosphorylated S CHD4 218583 35 19 49.1 753.68 HUMAN 1 -17.7362 -13.6713 KKNAKISSLLEEQFQ-p P62241;S160-p KKNAKISSLLEEQFQ 0.916056654296661 0.0392966409600179 -0.0166666666666667 -0.26 0.74455656942428 18.8661446659399 -0.0166666666666667 -0.26 0.842450404319678 0.0129833131874644 -0.208515768697436 -3.63656780632892 P62241 RPS8 P62241.S160.p_RPS8 P62241_S160s _1_1_160_160 P62241 P62241|Q5JR95 40S ribosomal protein S8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29481.29481.2 16.99 16.99 1.268 2 1 1 0 1023.0385 1965.1057 S160s TMT10 158 (K) ISsLLEEQFQQGK (L) IS(0.0)S(0.99)LLEEQFQQGK K:TMT10,s:Phosphorylated S RPS8 24490 4 2 4465.1 30.97 HUMAN 1 -0.7446 -18.8661 KKNAKPLSFKVGVGK-p Q00688;S163-p KKNAKPLSFKVGVGK 0.216274767980276 0.708872575769057 -0.315333333333333 0.0533333333333334 12.8153318510701 2.05453045776163 -0.315333333333333 0.0533333333333334 0.0522958004632733 0.623084509252081 -2.47784335400038 0.520783542581967 Q00688 FKBP3 Q00688.S163.p_FKBP3 Q00688_S163s _1_1_163_163 Q00688 Q00688 Peptidyl-prolyl cis-trans isomerase FKBP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14631.14631.3 10.6 10.6 99 1 1 1 0 557.998 1592.0139 S163s TMT10 158 (K) NAKPLsFK (V) NAKPLS(1.0)FK K:TMT10,s:Phosphorylated S FKBP3 25233.4 1 7 1207.1 166.76 HUMAN 1 -12.8153 2.0545 KKNEKTKSDEETLKA-p P35251;S29-p KKNEKTKSDEETLKA 0.716372991003982 0.0373259209872499 -0.0523333333333333 -0.386 2.73161767306776 19.1880748158119 -0.0523333333333333 -0.386 0.533136274305352 0.0120557023921947 -0.665352980499731 -3.70354097957784 P35251 RFC1 P35251.S29.p_RFC1 P35251_S29s _1_1_29_29 P35251 P35251|P35251-2|E0CX09 Replication factor C subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9156.9156.3 13.63 13.63 1.378 3 1 1 0 606.6675 1738.0201 S29s TMT10 27 (K) TKsDEETLK (A) T(0.0)KS(0.99)DEET(0.0)LK K:TMT10,s:Phosphorylated S RFC1 128765.8 3 1 316.1 367.51 HUMAN 1 -2.7316 -19.1881 KKNKEESSDDEDKES-p P35659;S244-p KKNKEESSDDEDKES 0.136368951978396 0.108710361083014 -0.602333333333333 0.208 17.7463600505811 12.7323751460111 -0.602333333333333 0.208 0.0168021166281637 0.0533043295668894 -3.41111418847274 2.46163485010624 P35659 DEK P35659.S244.p_DEK P35659_S243sS244s_2_2_243_244 P35659 P35659|B4DFG0|P35659-2 Protein DEK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8967.8967.4 10.49 10.49 10.491 3 2 2 0 914.4478 3494.8359 S243s S244s TMT10 239 (K) NKEEssDDEDKESEEEPPKK (T) NKEES(0.99)S(0.99)DDEDKES(0.0)EEEPPKK K:TMT10,s:Phosphorylated S DEK 42958.8 3 9 488.1 294.94 HUMAN 1 -17.7464 12.7324 KKNKKKKSPVPVETL-p Q32MZ4-2;S557-p KKNKKKKSPVPVETL 0.146473317485752 0.154701515012244 -0.272 -0.163333333333333 16.9899208369688 10.6582493260987 -0.272 -0.163333333333333 0.0199989832337028 0.0859359866154824 -3.26064988859618 -2.09542867382013 Q32MZ4 LRRFIP1 Q32MZ4.2.S557.p_LRRFIP1 Q32MZ4-2_S557s _1_1_557_557 Q32MZ4-2 Q32MZ4|Q32MZ4-2|Q32MZ4-3 Isoform 2 of Leucine-rich repeat flightless-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13368.13368.3 9.65 6.35 4.947 2 1 1 0 741.4598 2142.4032 S557s TMT10 555 (K) KKsPVPVETLK (D) KKS(0.99)PVPVET(0.0)LK K:TMT10,s:Phosphorylated S LRRFIP1 87029.9 2 10 235.1 419.93 HUMAN 1 -16.9899 -10.6582 KKNMKELTPLQAMML-p Q9Y2W2;T328-p KKNMKELTPLQAMML 0.687180225755767 0.939857825382183 -0.0723333333333333 -0.0113333333333333 3.05848920068264 0.384205606374318 -0.0723333333333333 -0.0113333333333333 0.494482674933193 0.915333673044815 -0.732267281021384 -0.111364602765091 Q9Y2W2 WBP11 Q9Y2W2.T328.p_WBP11 Q9Y2W2_T328t _1_1_328_328 Q9Y2W2 Q9Y2W2 WW domain-binding protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28698.28698.2 9.99 5.96 99 1 1 1 0 806.4152 1531.8538 T328t TMT10 326 (K) ELtPLQAMMLR (M) ELT(1.0)PLQAMMLR t:Phosphorylated T WBP11 69996.4 3 2 1858.1 110.79 HUMAN 1 -3.0585 -0.3842 KKNRIAIYELLFKEG-p P46783;Y12-p KKNRIAIYELLFKEG 0.825130077485234 0.18002961409304 -0.0493333333333333 -0.146666666666667 1.60985816872975 9.79480912739306 -0.0493333333333333 -0.146666666666667 0.690262345961041 0.104838086895165 -0.420557498806101 -1.94531430136109 P46783 RPS10 P46783.Y12.p_RPS10 P46783_Y12y _1_1_12_12 P46783 A0A1W2PQS6|F6U211|P46783 40S ribosomal protein S10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36731.36731.2 15.81 11.52 99 1 1 1 0 824.4801 1567.9864 Y12y TMT10 9 (R) IAIyELLFK (E) IAIY(1.0)ELLFK K:TMT10,y:Phosphorylated Y RPS10 18897.4 2 2 2425.1 84.06 HUMAN 1 -1.6099 -9.7948 KKNSRRVSFADTIKV-p Q8NG31;S60-p KKNSRRVSFADTIKV 0.297330507583042 0.00680825242509749 -0.186333333333333 -0.689 9.91424017094507 31.0972509886332 -0.186333333333333 -0.689 0.101994319074384 0.000776738623600088 -1.96681481950647 -6.76179954753138 Q8NG31 CASC5 Q8NG31.S60.p_CASC5 Q8NG31_S60s _1_1_60_60 Q8NG31 Q8NG31|Q8NG31-2 Kinetochore scaffold 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16152.16152.3 8.41 6.17 3.723 2 1 1 0 525.6296 1494.9044 S60s TMT10 58 (R) RVsFADTIK (V) RVS(0.99)FADT(0.0)IK K:TMT10,s:Phosphorylated S KNL1 268353.4 2 2 650.1 254.2 HUMAN 1 -9.9142 -31.0973 KKPALPVSPAARSKA-p A0A087X0M4;S28-p KKPALPVSPAARSKA 0.301769380581339 0.0104377289471877 0.148666666666667 -0.404666666666667 9.75643304601453 27.813555278762 0.148666666666667 -0.404666666666667 0.105768585270919 0.00165441504989022 1.93942392563641 -5.7852059820557 A0A087X0M4 NotFound A0A087X0M4.S28.p_NotFound A0A087X0M4_S28s _1_1_28_28 A0A087X0M4 A0A087X0M4 Kanadaptin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.32360.32360.4 19.64 19.64 1.166 6 1 1 0 949.0034 3713.0162 S28s Acetyl 2 (M) ADILSQSETLASQDLSGDFKKPALPVsPAAR (S) ADILS(0.0)QS(0.0)ET(0.0)LAS(0.0)QDLS(0.0)GDFKKPALPVS(0.99)PAAR K:TMT10,s:Phosphorylated S SLC4A1AP 83630.7 14 1 455.1 307.39 HUMAN 1 9.7564 -27.8136 KKPEEEGSAHQDTAE-p Q9ULW0;S174-p KKPEEEGSAHQDTAE 0.838274783466982 0.00538864127968498 -0.0373333333333333 -0.583333333333333 1.48257762648673 32.9340658687304 -0.0373333333333333 -0.583333333333333 0.710791519144771 0.000508854258188637 -0.390900976577947 -7.36373157461236 Q9ULW0 TPX2 Q9ULW0.S174.p_TPX2 Q9ULW0_S174s _1_1_174_174 Q9ULW0 Q9ULW0-2 Targeting protein for Xklp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4939.4939.4 13.11 13.11 5.2 2 1 1 0 695.8698 2700.4974 S174s TMT10 167 (K) KKPEEEGsAHQDTAEK (N) KKPEEEGS(0.99)AHQDT(0.0)AEK K:TMT10,s:Phosphorylated S TPX2 86279.1 1 4 599.1 263.33 HUMAN 1 -1.4826 -32.9341 KKPGLTPSPSATTPL-p Q9P2B4;S592-p KKPGLTPSPSATTPL 0.194933326368064 0.756802956854625 -0.235333333333333 -0.0313333333333333 13.8508494289761 1.67339340378381 -0.235333333333333 -0.0313333333333333 0.0412016925546661 0.680237640440559 -2.66557483548455 -0.435145488345946 Q9P2B4 CTTNBP2NL Q9P2B4.S592.p_CTTNBP2NL Q9P2B4_S592s _1_1_592_592 Q9P2B4 Q9P2B4 CTTNBP2 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17608.17608.3 10.59 10.59 1.199 6 1 1 0 788.4588 2283.3891 S592s TMT10 586 (K) KPGLTPsPSATTPLTK (T) KPGLT(0.0)PS(0.99)PS(0.0)AT(0.0)T(0.0)PLT(0.0)K K:TMT10,s:Phosphorylated S CTTNBP2NL 70613.2 1 8 1031.1 186 HUMAN 1 -13.8508 -1.6734 KKPIETGSPKTKECS-p Q05519-2;S448-p KKPIETGSPKTKECS 0.126572282263763 0.0154494473436868 0.329333333333333 -0.66 18.6395174674275 25.0514284946731 0.329333333333333 -0.66 0.0136788079860069 0.0031250512966389 3.5928676006171 -5.05049327560013 Q05519 SRSF11 Q05519.2.S448.p_SRSF11 Q05519-2_S448s _1_1_448_448 Q05519-2 Q05519|Q05519-2|Q5T757 Isoform 2 of Serine/arginine-rich splicing factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9685.9888.2 13.88 6.36 2.076 2 1 1 0 862.5015 1644.0299 S448s TMT10 442 (K) KPIETGsPK (T) KPIET(0.0)GS(0.99)PK K:TMT10,s:Phosphorylated S SRSF11 53527.2 25 9 185.1 475.04 HUMAN 1 18.6395 -25.0514 KKPPAPPSPVQSQSP-p A9Z1X7;S778-p KKPPAPPSPVQSQSP 0.317743722018832 0.287012322676421 -0.249 0.123 9.32358939578327 7.15146940811326 -0.249 0.123 0.116853321205161 0.19268728575538 -1.86439350187163 1.4870821576355 A9Z1X7 NotFound A9Z1X7.S778.p_NotFound A9Z1X7_S778s _1_1_778_778 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18444.18444.4 26.44 26.44 3.465 6 1 1 0 927.7729 3628.1033 S778s TMT10 772 (K) KPPAPPsPVQSQSPSTNWSPAVPVKK (A) KPPAPPS(0.99)PVQS(0.0)QS(0.0)PS(0.0)T(0.0)NWS(0.0)PAVPVKK K:TMT10,s:Phosphorylated S SRRM1 103445.7 8 46 8.1 1346.57 HUMAN 1 -9.3236 7.1515 KKPQEEDSPGPSTSS-p Q9BQE4;S140-p KKPQEEDSPGPSTSS 0.237987812515998 0.00815813217337322 -0.240666666666667 -0.529333333333333 11.9259317669918 29.7522872254081 -0.240666666666667 -0.529333333333333 0.0641810508037692 0.00105869601277894 -2.31920381381279 -6.34715759153693 Q9BQE4 VIMP Q9BQE4.S140.p_VIMP Q9BQE4_S140s _1_1_140_140 Q9BQE4 Q9BQE4|A0A182DWI4 Selenoprotein S HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13574.13574.3 18.77 14.63 4.789 5 1 1 0 851.7858 2473.3753 S140s TMT10 134 (K) KPQEEDsPGPSTSSVLK (R) KPQEEDS(0.99)PGPS(0.0)T(0.0)S(0.0)S(0.0)VLK K:TMT10,s:Phosphorylated S SELENOS 21263.1 5 2 3226.1 56.68 HUMAN 1 -11.9259 -29.7523 KKPSQTASYERLDVF-p Q8WUF5;S268-p KKPSQTASYERLDVF 0.856296769318185 0.0125330187807678 0.0333333333333333 -0.385333333333333 1.31125435603569 26.533616500423 0.0333333333333333 -0.385333333333333 0.739391688559619 0.00222145924446566 0.350228698590211 -5.43564522350866 Q8WUF5 PPP1R13L Q8WUF5.S268.p_PPP1R13L Q8WUF5_S268s _1_1_268_268 Q8WUF5 Q8WUF5 RelA-associated inhibitor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5496.5496.3 7.52 7.52 1.257 4 1 1 0 568.9619 1624.9059 S268s TMT10 262 (K) KPSQTAsYER (L) KPS(0.0)QT(0.0)AS(0.99)Y(0.0)ER K:TMT10,s:Phosphorylated S PPP1R13L 89431.8 2 10 371.1 339.39 HUMAN 1 1.3113 -26.5336 KKPYRIESDEEEDFE-p Q96T23;S1345-p KKPYRIESDEEEDFE 0.486350322519858 0.199446593861233 -0.215333333333333 0.315666666666667 5.76573453392719 9.21153942639189 -0.215333333333333 0.315666666666667 0.265110266697067 0.119907419674533 -1.24271646209671 1.84430713146352 Q96T23 RSF1 Q96T23.S1345.p_RSF1 Q96T23_S1345s _1_1_1345_1345 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18372.18372.4 17.99 17.99 3.771 5 1 1 0 1070.5508 4199.2166 S1345s TMT10 1329 (R) VLPSEQESTKKPYRIEsDEEEDFENVGK (V) VLPS(0.0)EQES(0.0)T(0.0)KKPY(0.0)RIES(0.99)DEEEDFENVGK K:TMT10,s:Phosphorylated S RSF1 165358.1 8 22 39.1 857.38 HUMAN 1 -5.7657 9.2115 KKQDLSSSLTDDSKN-p Q9NR09;S3591-p KKQDLSSSLTDDSKN 0.0613809554565416 0.0553521969756225 -0.655 -0.254333333333333 26.4480816738087 16.7470972215726 -0.655 -0.254333333333333 0.00226564484669262 0.0211490214577866 -5.42013067578304 -3.21058696653099 Q9NR09 BIRC6 Q9NR09.S3591.p_BIRC6 Q9NR09_S3591s _1_1_3591_3591 Q9NR09 Q9NR09 Baculoviral IAP repeat-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11962.11962.3 7.03 7.03 1.111 5 1 1 0 731.0576 2111.1799 S3591s TMT10 3585 (K) KQDLSSsLTDDSK (N) KQDLS(0.0)S(0.0)S(0.99)LT(0.0)DDS(0.0)K K:TMT10,s:Phosphorylated S BIRC6 536521.4 1 10 1201.1 166.97 HUMAN 1 -26.4481 -16.7471 KKQGEDNSTAQDTEE-p Q86UE4;S457-p KKQGEDNSTAQDTEE 0.109500745299266 0.0154889296641332 -0.357333333333333 -0.386333333333333 20.1105601831222 25.0265059284709 -0.357333333333333 -0.386333333333333 0.00974863884906997 0.00314303637447724 -3.90271804699671 -5.0441885621722 Q86UE4 MTDH Q86UE4.S457.p_MTDH Q86UE4_S457s _1_1_457_457 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11625.11625.2 19.72 19.72 1.151 3 1 1 0 1166.5343 2252.093 S457s TMT10 452 (K) QGEDNsTAQDTEELEK (E) QGEDNS(0.99)T(0.0)AQDT(0.0)EELEK K:TMT10,s:Phosphorylated S MTDH 63892.9 9 20 77.1 644.48 HUMAN 1 -20.1106 -25.0265 KKQKSILYDERSVHK-p P25787;Y57-p KKQKSILYDERSVHK 0.594186544234629 0.112619511279169 0.095 0.172333333333333 4.16969090898325 12.5091907655646 0.095 0.172333333333333 0.382851990243716 0.0561152527589784 0.949430343791967 2.4217211557274 P25787 PSMA2 P25787.Y57.p_PSMA2 P25787_Y57y _1_1_57_57 P25787 P25787 Proteasome subunit alpha type-2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.14200.14292.2 12.98 3.21 3.328 2 1 1 0 602.7951 1124.6149 Y57y TMT10 54 (K) SILyDER (S) S(0.0)ILY(0.99)DER y:Phosphorylated Y PSMA2 26012.2 1 1 68.1 34.64 HUMAN 1 4.1697 12.5092 KKQLSFISPPTPQPK-p O43395;S164-p KKQLSFISPPTPQPK 0.522310366005861 0.538846897197818 0.0963333333333333 0.068 5.21599679576323 3.61311905120964 0.0963333333333333 0.068 0.30088484965817 0.435199206538684 1.14349737640445 0.842281923482942 O43395 PRPF3 O43395.S164.p_PRPF3 O43395_S164s _1_1_164_164 O43395 O43395|O43395-3 U4/U6 small nuclear ribonucleoprotein Prp3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23574.23574.3 9.44 7.65 2.011 3 1 1 0 660.0361 1898.1152 S164s TMT10 159 (K) QLSFIsPPTPQPK (T) QLS(0.0)FIS(0.99)PPT(0.0)PQPK K:TMT10,s:Phosphorylated S PRPF3 77698.7 1 2 908.1 202.16 HUMAN 1 5.216 3.6131 KKQNAQSSDESFEPY-p Q8N554;S379-p KKQNAQSSDESFEPY 0.425455372410857 0.0268848782601585 -0.106333333333333 0.403333333333333 6.83675809495794 21.3168368762424 -0.106333333333333 0.403333333333333 0.207168723699727 0.00738441868230246 -1.43240722621406 4.16320393633838 Q8N554 ZNF276 Q8N554.S379.p_ZNF276 Q8N554_S378sS379s_2_2_378_379 Q8N554 Q8N554 Zinc finger protein 276 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12449.12449.4 7.63 7.63 7.63 4 2 2 0 747.6085 2827.4829 S378s S379s TMT10 373 (K) KQNAQssDESFEPYPERK (V) KQNAQS(0.99)S(0.99)DES(0.0)FEPY(0.0)PERK K:TMT10,s:Phosphorylated S ZNF276 68758.2 1 5 3532.1 48.89 HUMAN 1 -6.8368 21.3168 KKQNSLGSSDTLKKG-p Q99698;S2152-p KKQNSLGSSDTLKKG 0.771638354290043 0.812643386194471 -0.0426666666666667 0.0266666666666667 2.15503978126296 1.26256131632552 -0.0426666666666667 0.0266666666666667 0.608829968868981 0.747728386505804 -0.542869389461506 0.338466951189548 Q99698 LYST Q99698.S2152.p_LYST Q99698_S2152s _1_1_2152_2152 Q99698 Q99698 Lysosomal-trafficking regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10498.10498.3 11.22 5.08 1.183 4 1 1 0 801.4663 2322.4163 S2152s TMT10 2146 (K) KQNSLGsSDTLKK (G) KQNS(0.0)LGS(0.99)S(0.0)DT(0.0)LKK K:TMT10,s:Phosphorylated S LYST 434437.2 4 7 1334.1 152.67 HUMAN 1 -2.155 1.2626 KKQQKSDSEEKSDSE-p Q99442;S309-p KKQQKSDSEEKSDSE 0.159845829771225 0.501940587781562 -0.790666666666667 0.168666666666667 15.9436942417188 4.00827205174428 -0.790666666666667 0.168666666666667 0.0254466476200856 0.397349613416325 -3.0573864386533 0.918554669787119 Q99442 SEC62 Q99442.S309.p_SEC62 Q99442_S307sS309s_2_2_307_309 Q99442 Q99442 Translocation protein SEC62 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6901.6901.5 11.37 7.61 2.193 4 2 2 0 867.2583 4172.3313 S307s S309s TMT10 303 (K) KQQKsDsEEKSDSEKKEDEEGK (V) KQQKS(0.99)DS(0.99)EEKS(0.0)DS(0.0)EKKEDEEGK K:TMT10,s:Phosphorylated S SEC62 46203.3 5 7 1276.1 159.11 HUMAN 1 -15.9437 4.0083 KKRARRSSLLNAKKL-p Q8TEU7;S1094-p KKRARRSSLLNAKKL 0.30062605052911 0.753324692728842 0.279 0.0476666666666667 9.80450551494566 1.69943619444725 0.279 0.0476666666666667 0.104604278547802 0.676170750875012 1.94776554600693 0.44111246841533 Q8TEU7 RAPGEF6 Q8TEU7.S1094.p_RAPGEF6 Q8TEU7_S1094s _1_1_1094_1094 Q8TEU7 Q14149|E9PCH4|Q8TEU7-4|Q8TEU7-3|Q8TEU7-5|Q8TEU7-2|B7Z7Y1|D6RE77 Rap guanine nucleotide exchange factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16377.16377.2 10.95 4.33 1.373 2 1 1 0 635.8631 1190.7509 S1094s TMT10 1093 (R) SsLLNAK (K) S(0.0)S(0.99)LLNAK K:TMT10,s:Phosphorylated S RAPGEF6 180960.1 8 11 795.1 224.05 HUMAN 1 9.8045 1.6994 KKRDQTASAPATPLV-p Q53SF7;S294-p KKRDQTASAPATPLV 0.123781235897274 0.810071737114821 0.513666666666667 0.045 18.8615831027743 1.2821314817916 0.513666666666667 0.0450000000000001 0.0129969572283866 0.744366555224738 3.63878094323533 0.343188804945314 Q53SF7 COBLL1 Q53SF7.S294.p_COBLL1 Q53SF7_S294sT298t_2_2_294_298 Q53SF7 A0A0D9SG04|Q53SF7 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15169.15169.3 11.5 11.5 2.192 3 2 2 0 677.6701 1871.0638 S294s T298t TMT10 290 (R) DQTAsAPAtPLVNK (H) DQT(0.0)AS(0.99)APAT(0.99)PLVNK K:TMT10,s:Phosphorylated S,t:Phosphorylated T COBLL1 132526.1 1 26 163.1 494.83 HUMAN 1 18.8616 1.2821 KKRDRPKSTLMNFSK-p Q8WXE9-3;S281-p KKRDRPKSTLMNFSK 0.698184520976541 0.413763376101025 0.069 0.0793333333333334 2.93275362607442 5.09846619690945 0.069 0.0793333333333334 0.509008034297199 0.309138702864942 0.70672039121486 1.12184176590311 Q8WXE9 STON2 Q8WXE9.3.S281.p_STON2 Q8WXE9-3_S281s _1_1_281_281 Q8WXE9-3 Q8WXE9-3 Isoform 2 of Stonin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20895.20895.2 11.2 11.2 1.113 3 1 1 0 733.3807 1385.7863 S281s TMT10 281 (K) sTLMNFSK (V) S(0.99)T(0.0)LMNFS(0.0)K K:TMT10,s:Phosphorylated S STON2 103688.7 2 2 4047.1 38.65 HUMAN 1 2.9328 5.0985 KKRDSRKSSGFLNLI-p Q5VZK9;S1067-p KKRDSRKSSGFLNLI 0.698400439338318 0.0436038008077987 -0.0563333333333333 -0.392 2.92903495333815 18.2229026030555 -0.0563333333333333 -0.392 0.509444062150496 0.0150560046319991 -0.70596126964165 -3.50460372512852 Q5VZK9 LRRC16A Q5VZK9.S1067.p_LRRC16A Q5VZK9_S1067s _1_1_1067_1067 Q5VZK9 Q5VZK9|Q5VZK9-2 F-actin-uncapping protein LRRC16A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29239.29239.2 14.46 7.53 2.125 2 1 1 0 758.9296 1436.8877 S1067s TMT10 1067 (K) sSGFLNLIK (S) S(0.99)S(0.0)GFLNLIK K:TMT10,s:Phosphorylated S CARMIL1 152809.3 4 6 280.1 388.82 HUMAN 1 -2.929 -18.2229 KKRHKGWSPESPSAP-p Q4ZG55;S317-p KKRHKGWSPESPSAP 0.820904102287946 0.0466309989479395 -0.05 0.301666666666667 1.64945271535105 17.8095923259854 -0.05 0.301666666666667 0.683997837170111 0.0165592539857159 -0.429691077069293 3.42106901403406 Q4ZG55 GREB1 Q4ZG55.S317.p_GREB1 Q4ZG55_S317s _1_1_317_317 Q4ZG55 Q4ZG55|Q4ZG55-2|Q4ZG55-3 Protein GREB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12267.12267.3 11.58 11.58 1.173 3 1 1 0 793.6731 2299.0359 S317s TMT10 315 (K) GWsPESPSAPDGGCPQGGGNR (A) GWS(0.99)PES(0.0)PS(0.0)APDGGCPQGGGNR C:Carbamidomethylation,s:Phosphorylated S GREB1 219316 3 1 1072.1 180.69 HUMAN 1 -1.6495 17.8096 KKRIEPLSPELVAAA-p Q92665;S152-p KKRIEPLSPELVAAA 0.196087831032382 0.00570552946066638 0.217 0.512333333333333 13.78497465545 32.4877613125159 0.217 0.512333333333333 0.0418314129841257 0.000563928272882045 2.65352369278657 7.21352176079182 Q92665 MRPS31 Q92665.S152.p_MRPS31 Q92665_S152s _1_1_152_152 Q92665 Q92665 28S ribosomal protein S31, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37821.37821.3 21.05 17.81 9.843 3 1 1 0 883.7921 2569.3963 S152s Hydrogen 148 (R) IEPLsPELVAAASAVADSLPFDK (Q) IEPLS(0.99)PELVAAAS(0.0)AVADS(0.0)LPFDK K:TMT10-Lys-Only,s:Phosphorylated S MRPS31 45431.8 4 3 2669.1 74.39 HUMAN 1 13.785 32.4878 KKRIIYDSDSESEET-p P35251;S69-p KKRIIYDSDSESEET 0.42487138016849 0.9704388309982 0.119 0.004 6.85052433251438 0.18524701152503 0.119 0.00400000000000001 0.206513081333788 0.958242213287873 1.43482207791749 0.0548239111822111 P35251 RFC1 P35251.S69.p_RFC1 P35251_S69s _1_1_69_69 P35251 P35251|P35251-2|E0CX09 Replication factor C subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22407.22407.2 16.59 10 1.217 5 1 1 0 1197.595 2314.2066 S69s TMT10 65 (R) IIYDsDSESEETLQVK (N) IIY(0.0)DS(0.99)DS(0.0)ES(0.0)EET(0.0)LQVK K:TMT10,s:Phosphorylated S RFC1 128765.8 4 3 316.1 367.51 HUMAN 1 6.8505 0.1852 KKRISSKSPGHMVIL-p Q9NWH9;S553-p KKRISSKSPGHMVIL 0.383617908533383 0.0173615564197841 -0.217 0.463333333333333 7.70194386093162 24.2707541957317 -0.217 0.463333333333333 0.169748370478695 0.00374045625873791 -1.5834091652533 4.85558959302903 Q9NWH9 SLTM Q9NWH9.S553.p_SLTM Q9NWH9_S553s _1_1_553_553 Q9NWH9 Q9NWH9|Q9NWH9-3 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16743.16743.3 18.28 18.28 17.595 2 1 1 0 621.9991 1784.0141 S553s TMT10 553 (K) sPGHMVILDQTK (G) S(0.99)PGHMVILDQT(0.0)K K:TMT10,s:Phosphorylated S SLTM 117431.6 39 12 167.1 494.15 HUMAN 1 -7.7019 24.2708 KKRKASGSENEGDYN-p Q02880;S1552-p KKRKASGSENEGDYN 0.133015503975615 0.00728722690180359 0.263 0.465666666666667 18.0593860808518 30.5697511646518 0.262059327247286 0.465666666666667 0.0156336862497903 0.000877051071622455 3.47429385384932 6.59664366244935 Q02880 TOP2B Q02880.S1552.p_TOP2B Q02880_S1552s _1_1_1552_1552 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5864.5864.2 16.48 16.48 2.165 3 1 1 0 881.3681 1681.7615 S1552s TMT10 1549 (K) ASGsENEGDYNPGR (K) AS(0.0)GS(0.99)ENEGDY(0.0)NPGR s:Phosphorylated S TOP2B 184233.7 9 46 71.1 658.36 HUMAN 1 18.0594 30.5698 KKRKDPFSPDKKKPV-p Q5PSV4;S197-p KKRKDPFSPDKKKPV 0.139286671509888 0.00235687401929515 -0.541333333333333 -0.846666666666667 17.5208988090204 40.3638271586343 -0.541333333333333 -0.846666666666667 0.0176974265726086 9.19638795894653e-05 -3.36594512286359 -10.2962262472506 Q5PSV4 BRMS1L Q5PSV4.S197.p_BRMS1L Q5PSV4_S197s _1_1_197_197 Q5PSV4 Q5PSV4|Q5PSV4-2 Breast cancer metastasis-suppressor 1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10977.10977.4 9.11 9.11 99 1 1 1 0 465.011 1777.0575 S197s TMT10 192 (K) RKDPFsPDK (K) RKDPFS(1.0)PDK K:TMT10,s:Phosphorylated S BRMS1L 38027.8 10 2 3512.1 49.33 HUMAN 1 -17.5209 -40.3638 KKRKKRKSEDGTPAE-p Q9BQG0-2;S1186-p KKRKKRKSEDGTPAE 0.0304032852631674 0.00250305172310792 -0.710666666666667 -0.81 35.5094430038563 39.7776828310666 -0.710666666666667 -0.806825229459589 0.000281226148852949 0.00010525232955938 -8.30006086817471 -10.0318123786455 Q9BQG0 MYBBP1A Q9BQG0.2.S1186.p_MYBBP1A Q9BQG0-2_S1186s _1_1_1186_1186 Q9BQG0-2 Q9BQG0-2 Isoform 2 of Myb-binding protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7446.7446.4 17.94 17.94 1.177 6 1 1 0 888.9463 3472.8058 S1186s TMT10 1183 (K) KRKsEDGTPAEDGTPAATGGSQPPSMGR (K) KRKS(0.99)EDGT(0.0)PAEDGT(0.0)PAAT(0.0)GGS(0.0)QPPS(0.0)MGR K:TMT10,s:Phosphorylated S MYBBP1A 150334.3 4 5 297.1 378.74 HUMAN 1 -35.5094 -39.7777 KKRKQGGSPDEPDSK-p Q9ULX6;S283-p KKRKQGGSPDEPDSK 0.228623979957718 0.00493055216620731 0.252 0.544666666666667 12.317350535775 33.6576838402469 0.252 0.544666666666667 0.0586495854044328 0.000430756278240067 2.38875352055778 7.61289029484101 Q9ULX6 AKAP8L Q9ULX6.S283.p_AKAP8L Q9ULX6_S283s _1_1_283_283 Q9ULX6 Q9ULX6|Q9ULX6-2|V9GZ50 A-kinase anchor protein 8-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5633.5633.2 14.97 12.61 3.97 2 1 1 0 1006.519 1932.0641 S283s TMT10 279 (R) KQGGsPDEPDSK (A) KQGGS(0.99)PDEPDS(0.0)K K:TMT10,s:Phosphorylated S AKAP8L 72103.9 16 1 3424.1 51.45 HUMAN 1 12.3174 33.6577 KKRKRSPSPSPTPEA-p Q8TAQ2;S304-p KKRKRSPSPSPTPEA 0.563810063757983 0.0339492163873117 0.079 0.312333333333333 4.58457374956228 19.8043953294788 0.079 0.312333333333333 0.347970658524401 0.0104606932511405 1.02734737890856 3.83355417503144 Q8TAQ2 SMARCC2 Q8TAQ2.S304.p_SMARCC2 Q8TAQ2_S304s _1_1_304_304 Q8TAQ2 F8VXC8|Q8TAQ2|Q8TAQ2-3|Q8TAQ2-2 SWI/SNF complex subunit SMARCC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8352.8352.2 14.39 14.39 1.509 4 1 1 0 818.4236 1555.8732 S304s TMT10 302 (R) SPsPSPTPEAK (K) S(0.0)PS(0.99)PS(0.0)PT(0.0)PEAK K:TMT10,s:Phosphorylated S SMARCC2 133276.4 2 4 499.1 292.05 HUMAN 1 4.5846 19.8044 KKRKRSRSTTPAPKS-p Q9UQ35;S250-p KKRKRSRSTTPAPKS 0.120014369208718 0.882524257906594 0.297333333333333 0.0176666666666667 19.145226523304 0.762178833661623 0.297333333333333 0.0176666666666667 0.0121752348648099 0.839038939276547 3.69786058691527 0.213091002594487 Q9UQ35 SRRM2 Q9UQ35.S250.p_SRRM2 Q9UQ35_S248sS250s_2_2_248_250 Q9UQ35 Q9UQ35|Q9UQ35-2|Q9UQ35-3|A0A087X1W1 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4886.4886.2 7.09 7.09 1.13 4 2 2 0 667.3109 1173.6789 S248s S250s Hydrogen 248 (R) sRsTTPAPK (S) S(0.99)RS(0.99)T(0.0)T(0.0)PAPK K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 2 170 2.1 3310.34 HUMAN 1 19.1452 0.7622 KKRLRKPSREDDLLA-p Q9NP71;S196-p KKRLRKPSREDDLLA 0.13430679397205 0.722756320351463 -0.289333333333333 0.0396666666666667 17.8961753776103 1.94160111761637 -0.289333333333333 0.0396666666666667 0.0162323897650183 0.639499027300031 -3.44128362037897 0.495773045992295 Q9NP71 MLXIPL Q9NP71.S196.p_MLXIPL Q9NP71_S196s _1_1_196_196 Q9NP71 Q9NP71|Q9NP71-3|Q9NP71-2 Carbohydrate-responsive element-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11521.11521.4 12.16 7.37 99 1 1 1 0 544.8131 2096.2592 S196s Hydrogen 192 (R) LRKPsREDDLLAPK (Q) LRKPS(1.0)REDDLLAPK K:TMT10-Lys-Only,s:Phosphorylated S MLXIPL 93755.5 3 6 1023.1 187.4 HUMAN 1 -17.8962 1.9416 KKRPASPSHNGSSGG-p Q6PI98-4;S28-p KKRPASPSHNGSSGG 0.769640662643281 0.666287522608034 -0.0563333333333333 0.079 2.17856316853823 2.41334517382106 -0.0563333333333333 0.0790000000000001 0.605541180478494 0.573674416548238 -0.547992802581611 0.598437016962413 Q6PI98 INO80C Q6PI98.4.S28.p_INO80C Q6PI98-4_S28s _1_1_28_28 Q6PI98-4 Q6PI98-4|Q6PI98-3|K7ENP7|K7EQ79|K7ELX9 Isoform 3 of INO80 complex subunit C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.4239.4239.5 18.04 18.04 1.278 6 1 1 0 606.1318 2946.668 S28s TMT10 22 (K) KRPASPsHNGSSGGGYGASKK (K) KRPAS(0.0)PS(0.99)HNGS(0.0)S(0.0)GGGY(0.0)GAS(0.0)KK K:TMT10,s:Phosphorylated S INO80C 24611.8 1 2 3474.1 50.14 HUMAN 1 -2.1786 2.4133 KKRPQRATSNVFAMF-p J3QRS3;T24-p KKRPQRATSNVFAMF 0.990165243393956 0.928193312474012 0.00266666666666667 0.0203333333333334 0.0888865070521652 0.455931694227627 0.00266666666666667 0.0203333333333334 0.979741150244045 0.900340591491974 0.0265882634496441 0.131209665227818 J3QRS3 MYL12A J3QRS3.T24.p_MYL12A J3QRS3_T24tS25s_2_2_24_25 J3QRS3 J3QRS3|O14950|P24844|P19105|P24844-2 Myosin regulatory light chain 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25048.25048.5 12.98 12.98 12.985 3 2 2 0 721.5698 3443.8825 T24t S25s TMT10 18 (K) KRPQRAtsNVFAMFDQSQIQEFK (E) KRPQRAT(0.99)S(0.99)NVFAMFDQS(0.0)QIQEFK K:TMT10,t:Phosphorylated T,s:Phosphorylated S MYL12A 20513.6 5 4 2636.1 75.75 HUMAN 1 0.0889 0.4559 KKRQIDSSEEDDDEE-p O14646;S216-p KKRQIDSSEEDDDEE 0.682205479656831 0.56139328956448 -0.0663333333333333 -0.0553333333333333 3.11270522529442 3.37959157009633 -0.0663333333333334 -0.0553333333333333 0.488348072009673 0.459241199897093 -0.743212492930451 -0.79639105620856 O14646 CHD1 O14646.S216.p_CHD1 O14646_S215sS216s_2_2_215_216 O14646 O14646|O14646-2 Chromodomain-helicase-DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.10572.10982.3 13.33 13.33 13.328 3 2 2 0 896.9893 2546.0488 Q212q S215s S216s Hydrogen 212 (R) qIDssEEDDDEEDYDNDKR (S) Q(1.0)IDS(0.99)S(0.99)EEDDDEEDY(0.0)DNDKR K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S CHD1 197825.1 10 13 848.1 212.75 HUMAN 1 -3.1127 -3.3796 KKRQLLDSDEEQEED-p Q9UNS1;S1173-p KKRQLLDSDEEQEED 0.883932229691516 0.0077754766424551 0.0246666666666667 -0.458333333333333 1.05688994116596 30.1028944088905 0.0246666666666667 -0.458333333333333 0.783990871380836 0.00097658614619541 0.288088416625201 -6.45321562855482 Q9UNS1 TIMELESS Q9UNS1.S1173.p_TIMELESS Q9UNS1_S1173s _1_1_1173_1173 Q9UNS1 Q9UNS1|Q9UNS1-2 Protein timeless homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17028.17028.4 23.78 23.78 99 1 1 1 0 916.1996 3581.8084 S1173s TMT10 1169 (R) QLLDsDEEQEEDEGRNRAPELGAPGIQK (K) QLLDS(1.0)DEEQEEDEGRNRAPELGAPGIQK K:TMT10,s:Phosphorylated S TIMELESS 139682.8 21 6 579.1 266.89 HUMAN 1 1.0569 -30.1029 KKRQSAPSPTRVAVV-p Q13905-4;S313-p KKRQSAPSPTRVAVV 0.105885561453204 0.628997594263498 0.362666666666667 0.0673333333333334 20.5435522204525 2.73832652732416 0.362666666666667 0.0673333333333334 0.0088235789908413 0.532313336755537 3.99658579801981 0.66665418787942 Q13905 RAPGEF1 Q13905.4.S313.p_RAPGEF1 Q13905-4_S313s _1_1_313_313 Q13905-4 Q13905-3|Q13905-4|Q13905-2 Isoform 4 of Rap guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13794.13794.3 17.45 17.45 1.919 4 1 1 0 688.3602 1983.1007 S313s TMT10 309 (R) QSAPsPTRVAVVAPMSR (A) QS(0.0)APS(0.99)PT(0.0)RVAVVAPMS(0.0)R s:Phosphorylated S RAPGEF1 123026.2 6 6 676.1 246.9 HUMAN 1 20.5436 2.7383 KKRRFPGSMEGFVTL-p A8MXP9;S722-p KKRRFPGSMEGFVTL 0.992617417092834 0.401272784248176 -0.00166666666666667 0.0946666666666667 0.068839816438719 5.27461950487388 -0.00166666666666669 0.0946666666666667 0.984274011706152 0.296850680960322 -0.0206380681721015 1.15390961467406 A8MXP9 NotFound A8MXP9.S722.p_NotFound A8MXP9_S722s _1_1_722_722 A8MXP9 A8MXP9|Q68E03 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.33099.33099.4 15.72 11.1 3.609 3 1 1 0 799.8738 3116.5022 S722s TMT10 719 (R) FPGsMEGFVTLDEVGDEEDSELQK (L) FPGS(0.99)MEGFVT(0.0)LDEVGDEEDS(0.0)ELQK K:TMT10,s:Phosphorylated S MATR3 100478.9 3 28 92.1 615.57 HUMAN 1 -0.0688 5.2746 KKRSEDESETEDEEE-p P25205-2;S717-p KKRSEDESETEDEEE 0.228723302340973 0.141385600820352 0.412666666666667 -0.314333333333333 12.3133513747781 11.1947155896476 0.412666666666667 -0.314333333333333 0.0587036172120141 0.0759501159178118 2.38804088727707 -2.18925033147871 P25205 MCM3 P25205.2.S717.p_MCM3 P25205-2_S717s _1_1_717_717 P25205-2 P25205|P25205-2|J3KQ69 Isoform 2 of DNA replication licensing factor MCM3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5676.6142.3 24.6 24.6 1.743 4 1 1 0 1022.7668 2986.3173 S717s Hydrogen 713 (R) SEDEsETEDEEEKSQEDQEQK (R) S(0.0)EDES(0.99)ET(0.0)EDEEEKS(0.0)QEDQEQK K:TMT10-Lys-Only,s:Phosphorylated S MCM3 96534.2 20 5 136.1 528.96 HUMAN 1 12.3134 -11.1947 KKRSKLLSPYSPQTQ-p Q9P265;S50-p KKRSKLLSPYSPQTQ 0.400028642815168 0.0078345649628161 -0.125666666666667 -0.451 7.3433461215868 30.0418795927281 -0.125666666666667 -0.451 0.184359443215885 0.000990403213318556 -1.52099032851072 -6.43465755841781 Q9P265 DIP2B Q9P265.S50.p_DIP2B Q9P265_S50s _1_1_50_50 Q9P265 Q9P265 Disco-interacting protein 2 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20920.20920.3 13.49 13.49 1.135 6 1 1 0 844.0999 2450.3179 S50s TMT10 48 (K) LLsPYSPQTQETDSAVQK (E) LLS(0.99)PY(0.0)S(0.0)PQT(0.0)QET(0.0)DS(0.0)AVQK K:TMT10,s:Phosphorylated S DIP2B 173713.6 1 2 1010.1 188.94 HUMAN 1 -7.3433 -30.0419 KKRSKPSSSEEDEGP-p Q01831;S398-p KKRSKPSSSEEDEGP 0.676823734876953 0.0277238968700976 0.0588333333333333 0.363666666666667 3.17397821970685 21.1070609188129 0.0588333333333333 0.363666666666667 0.481506526451949 0.00774986091013265 0.755533044169844 4.11654200842532 Q01831 XPC Q01831.S398.p_XPC Q01831_S398sS399s_2_2_398_399 Q01831 Q01831|Q01831-2 DNA repair protein complementing XP-C cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8483.8483.5 11.17 12.31 1.184 4 2 2 0 602.8948 2850.5139 S398s S399s TMT10 394 (R) SKPSssEEDEGPGDKQEK (A) S(0.0)KPS(0.0)S(0.99)S(0.99)EEDEGPGDKQEK K:TMT10,s:Phosphorylated S XPC 106806.6 5 11 780.1 226.3 HUMAN 2 3.174 21.1071 KKRSSLFSPRRNKKE-p Q7RTP6;S1704-p KKRSSLFSPRRNKKE 0.71570695508954 0.00270482153372727 0.067 -0.826333333333333 2.74075967643884 39.0159877131532 0.067 -0.826333333333333 0.532015189985001 0.000125429944089984 0.667247190837604 -9.69745459519061 Q7RTP6 MICAL3 Q7RTP6.S1704.p_MICAL3 Q7RTP6_S1704s _1_1_1704_1704 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15717.15717.2 8.55 4.01 4.122 3 1 1 0 551.7802 1022.5832 S1704s TMT10 1700 (R) SSLFsPR (R) S(0.0)S(0.0)LFS(0.99)PR s:Phosphorylated S MICAL3 225431.9 2 20 190.1 466.81 HUMAN 1 2.7408 -39.016 KKRVFPLSPASNLRV-p Q5VWN6;S340-p KKRVFPLSPASNLRV 0.928836294392322 0.0456329957364995 -0.0166666666666667 -0.316 0.636315091578658 17.9424038634621 -0.0166666666666667 -0.316 0.863711079842927 0.0160605204104864 -0.179987052866055 -3.44780707457628 Q5VWN6 FAM208B Q5VWN6.S340.p_FAM208B Q5VWN6_S340s _1_1_340_340 Q5VWN6 Q5VWN6 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18593.18593.3 13.79 13.79 4.085 2 1 1 0 555.9744 1585.9376 S340s TMT10 335 (K) RVFPLsPASNLR (V) RVFPLS(0.99)PAS(0.0)NLR s:Phosphorylated S FAM208B 271861.7 6 3 275.1 391.61 HUMAN 1 -0.6363 -17.9424 KKRVRRPSESDKEDE-p Q02952;S627-p KKRVRRPSESDKEDE 0.364379130382082 0.154358134077412 -0.134666666666667 0.161666666666667 8.13584104937665 10.6727829824243 -0.134666666666667 0.161666666666667 0.153608728774171 0.0856488826690304 -1.65871750357504 2.09796400162276 Q02952 AKAP12 Q02952.S627.p_AKAP12 Q02952_S627s _1_1_627_627 Q02952 Q02952|Q02952-2|Q02952-3 A-kinase anchor protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8971.8971.4 11.97 5.77 1.141 2 1 1 0 579.5491 2235.2072 S627s TMT10 625 (R) RPsESDKEDELDK (V) RPS(0.99)ES(0.0)DKEDELDK K:TMT10,s:Phosphorylated S AKAP12 192048.9 4 5 2207.1 93.46 HUMAN 1 -8.1358 10.6728 KKSAEIDSDDTGGSA-p P33176;S819-p KKSAEIDSDDTGGSA 0.827721689148675 0.685535240328192 0.0366666666666667 -0.047 1.57947415872917 2.24455740675506 0.0366666666666667 -0.047 0.695108475829838 0.59640909730163 0.413519452386724 -0.562236507779175 P33176 KIF5B P33176.S819.p_KIF5B P33176_S819s _1_1_819_819 P33176 P33176 Kinesin-1 heavy chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8377.8377.3 19.37 19.37 2.524 4 1 1 0 816.4147 2367.2607 S819s TMT10 813 (K) KSAEIDsDDTGGSAAQK (Q) KS(0.0)AEIDS(0.99)DDT(0.0)GGS(0.0)AAQK K:TMT10,s:Phosphorylated S KIF5B 110424.6 1 5 2011.1 102.48 HUMAN 1 1.5795 -2.2446 KKSARFKSDSGSLGD-p Q5T5U3;S1712-p KKSARFKSDSGSLGD 0.0728296455527661 0.187670558350599 -0.753666666666667 0.192333333333333 24.4696791389345 9.55785846776559 -0.753666666666667 0.192333333333333 0.00357299234798233 0.110716960138919 -4.91070462212825 1.90425478419023 Q5T5U3 ARHGAP21 Q5T5U3.S1712.p_ARHGAP21 Q5T5U3_S1712s _1_1_1712_1712 Q5T5U3 Q5T5U3 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13375.13375.3 7.29 7.29 1.11 3 1 1 0 660.3526 1899.0791 S1712s TMT10 1710 (R) FKsDSGSLGDAK (N) FKS(0.99)DS(0.0)GS(0.0)LGDAK K:TMT10,s:Phosphorylated S ARHGAP21 218696.3 1 24 148.1 512.52 HUMAN 1 -24.4697 9.5579 KKSASSESEAENLEA-p Q13427;S259-p KKSASSESEAENLEA 0.672208072197654 0.478170412362545 -0.077 0.069 3.23041692541028 4.2740383239074 -0.077 0.069 0.475289595655066 0.373762880067696 -0.766836323798441 0.968990574053608 Q13427 PPIG Q13427.S259.p_PPIG Q13427_S256sS257sS259s_3_3_256_259 Q13427 Q13427|E9PG73|Q13427-2 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22529.22529.3 18.09 18.09 2.468 6 3 3 0 1287.5695 3620.7877 S256s S257s S259s TMT10 254 (K) SAssEsEAENLEAQPQSTVRPEEIPPIPENR (F) S(0.0)AS(0.99)S(0.99)ES(0.99)EAENLEAQPQS(0.0)T(0.0)VRPEEIPPIPENR s:Phosphorylated S PPIG 89129.1 4 26 112.1 571.91 HUMAN 1 -3.2304 4.274 KKSDANASYLRAARA-p Q12955;S44-p KKSDANASYLRAARA 0.772883727112607 0.0252161451672878 0.0556666666666667 -0.36 2.14005948480419 21.7498575251552 0.0556666666666667 -0.36 0.610933656961849 0.00668365843649157 0.539600560599763 -4.26052185595311 Q12955 ANK3 Q12955.S44.p_ANK3 Q12955_S44s _1_1_44_44 Q12955 Q12955|Q12955-4|Q12955-5|A0A087X0B4 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8556.8556.2 7.89 4.22 2.695 3 1 1 0 831.9354 1582.8953 S44s TMT10 38 (K) KSDANAsYLR (A) KS(0.0)DANAS(0.99)Y(0.0)LR K:TMT10,s:Phosphorylated S ANK3 482683.6 1 5 135.1 530.51 HUMAN 1 2.1401 -21.7499 KKSHRAPSPARPKDV-p O94964-2;S35-p KKSHRAPSPARPKDV 0.440361201395823 0.542798699950074 0.112666666666667 -0.075 6.56141297230158 3.56976380531718 0.112666666666667 -0.075 0.220728647796508 0.439565520925902 1.38400062882573 -0.833810687990121 O94964 SOGA1 O94964.2.S35.p_SOGA1 O94964-2_S35s _1_1_35_35 O94964-2 O94964-2 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5829.5829.3 7.52 7.52 99 1 1 1 0 454.5956 1281.8043 S35s TMT10 33 (R) APsPARPK (D) APS(1.0)PARPK K:TMT10,s:Phosphorylated S SOGA1 185623.3 4 1 215.1 433.51 HUMAN 1 6.5614 -3.5698 KKSIMVQSPEKAYSS-p Q14191;S1133-p KKSIMVQSPEKAYSS 0.87809758301454 0.00133342802810582 -0.025 -0.972 1.11075188286175 46.7416414995923 -0.025 -0.972000000000001 0.774327728830065 2.11756061117708e-05 -0.301433209646531 -13.6229269182014 Q14191 WRN Q14191.S1133.p_WRN Q14191_S1133s _1_1_1133_1133 Q14191 Q14191 Werner syndrome ATP-dependent helicase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12859.12859.3 14.74 14.74 14.743 2 1 1 0 638.6964 1834.1075 S1133s TMT10 1127 (K) KSIMVQsPEK (A) KS(0.0)IMVQS(0.99)PEK K:TMT10,s:Phosphorylated S WRN 164512 4 3 3102.1 60.61 HUMAN 1 -1.1108 -46.7416 KKSKKSASSESEAEN-p Q13427;S256-p KKSKKSASSESEAEN 0.672208072197654 0.478170412362545 -0.077 0.069 3.23041692541028 4.2740383239074 -0.077 0.069 0.475289595655066 0.373762880067696 -0.766836323798441 0.968990574053608 Q13427 PPIG Q13427.S256.p_PPIG Q13427_S256sS257sS259s_3_3_256_259 Q13427 Q13427|E9PG73|Q13427-2 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22529.22529.3 18.09 18.09 2.468 6 3 3 0 1287.5695 3620.7877 S256s S257s S259s TMT10 254 (K) SAssEsEAENLEAQPQSTVRPEEIPPIPENR (F) S(0.0)AS(0.99)S(0.99)ES(0.99)EAENLEAQPQS(0.0)T(0.0)VRPEEIPPIPENR s:Phosphorylated S PPIG 89129.1 4 26 112.1 571.91 HUMAN 1 -3.2304 4.274 KKSKTDGSQKTESST-p A8MXP9;S615-p KKSKTDGSQKTESST 0.412754403330661 0.0128686511008283 -0.319333333333333 0.386666666666667 7.08948002037795 26.330415194202 -0.319333333333333 0.386666666666667 0.195457346232441 0.00232786869812793 -1.4766673074365 5.38162796840429 A8MXP9 NotFound A8MXP9.S615.p_NotFound A8MXP9_S615s _1_1_615_615 A8MXP9 A8MXP9|P43243|D6REM6|P43243-2|B3KM87 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5962.5962.5 12.52 12.52 1.233 7 1 1 0 708.5746 3458.8835 S615s TMT10 610 (K) SKTDGsQKTESSTEGKEQEEK (S) S(0.0)KT(0.0)DGS(0.99)QKT(0.0)ES(0.0)S(0.0)T(0.0)EGKEQEEK K:TMT10,s:Phosphorylated S MATR3 100478.9 5 25 92.1 615.57 HUMAN 1 -7.0895 26.3304 KKSPVGKSPPSTGST-p Q9Y2W1;S320-p KKSPVGKSPPSTGST 0.54543406139008 0.00650421106257676 -0.144 0.803 4.85926509613715 31.444591133859 -0.144 0.803 0.326643101345124 0.000717035877679714 -1.07820347096191 6.87238231223905 Q9Y2W1 THRAP3 Q9Y2W1.S320.p_THRAP3 Q9Y2W1_S320s _1_1_320_320 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11309.11309.3 20.24 12.4 20.243 12 1 1 0 1125.2201 3293.6741 S320s TMT10 320 (K) sPPSTGSTYGSSQKEESAASGGAAYTK (R) S(0.99)PPS(0.0)T(0.0)GS(0.0)T(0.0)Y(0.0)GS(0.0)S(0.0)QKEES(0.0)AAS(0.0)GGAAY(0.0)T(0.0)K K:TMT10,s:Phosphorylated S THRAP3 108720.9 20 64 10.2 1293.04 HUMAN 1 -4.8593 31.4446 KKSSIEVSDDTDQEE-p Q6UWV2;S204-p KKSSIEVSDDTDQEE 0.466667919827382 0.880568740881018 -0.14 -0.0186666666666666 6.10863310683739 0.775997026862646 -0.14 -0.0186666666666667 0.244983417834195 0.836373564156955 -1.30389263660434 -0.216684851063502 Q6UWV2 MPZL3 Q6UWV2.S204.p_MPZL3 Q6UWV2_S204sT207t_2_2_204_207 Q6UWV2 Q6UWV2|Q6UWV2-2 Myelin protein zero-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14495.14495.3 17.46 17.46 6.762 4 2 2 0 897.3428 2530.0759 S204s T207t TMT10 199 (K) SSIEVsDDtDQEEEEACMAR (L) S(0.0)S(0.0)IEVS(0.99)DDT(0.99)DQEEEEACMAR C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T MPZL3 26387.6 2 3 3431.1 51.22 HUMAN 1 -6.1086 -0.776 KKSSSLESLQTAVAE-p Q8TEW8;S749-p KKSSSLESLQTAVAE 0.844332914046491 0.206494358985813 0.0326666666666667 0.140333333333333 1.42268188080483 9.01231165539787 0.0326666666666667 0.140333333333333 0.720662314119575 0.125536158406626 0.376783118458129 1.8098421236852 Q8TEW8 PARD3B Q8TEW8.S749.p_PARD3B Q8TEW8_S746sS749s_2_2_746_749 Q8TEW8 Q8TEW8|Q8TEW8-2|Q8TEW8-5 Partitioning defective 3 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21725.21725.3 9.72 9.72 1.717 5 2 2 0 775.0626 2163.2385 S746s S749s TMT10 743 (K) KSSsLEsLQTAVAEVR (K) KS(0.0)S(0.0)S(0.99)LES(0.99)LQT(0.0)AVAEVR K:TMT10,s:Phosphorylated S PARD3B 133176.7 2 48 65.4 692.2 HUMAN 1 1.4227 9.0123 KKSVGGDSDTEDMRS-p Q9UK61;S699-p KKSVGGDSDTEDMRS 0.85938924260103 0.421002827196796 -0.0263333333333333 0.0796666666666667 1.2851578821711 5.00045666780666 -0.0263333333333334 0.0796666666666667 0.743848020778297 0.316194515894152 -0.343953211346272 1.10391865797864 Q9UK61 FAM208A Q9UK61.S699.p_FAM208A Q9UK61_S699s _1_1_699_699 Q9UK61 Q9UK61|Q9UK61-4|Q9UK61-3|Q9UK61-2|A0A087X0F1 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7875.7875.3 12.47 10.01 2.446 4 1 1 0 674.6467 1941.9588 S699s TMT10 694 (K) SVGGDsDTEDMRSK (T) S(0.0)VGGDS(0.99)DT(0.0)EDMRS(0.0)K K:TMT10,s:Phosphorylated S FAM208A 190568.5 6 7 246.1 411.17 HUMAN 1 -1.2852 5.0005 KKSVLCSTPTINIPA-p Q96KB5-2;T24-p KKSVLCSTPTINIPA 0.815038224007602 0.049885048454094 0.0356666666666667 -0.237 1.70497054779507 17.4095582601558 0.0356666666666667 -0.237 0.67530963367341 0.0181570033617506 0.442426914282081 -3.34111830842647 Q96KB5 PBK Q96KB5.2.T24.p_PBK Q96KB5-2_T24t _1_1_24_24 Q96KB5-2 Q96KB5-2|E5RIE1 Isoform 2 of Lymphokine-activated killer T-cell-originated protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30652.30652.4 15.02 15.02 1.134 5 1 1 0 658.0948 2549.3872 T24t TMT10 19 (K) SVLCStPTINIPASPFMQK (L) S(0.0)VLCS(0.0)T(0.99)PT(0.0)INIPAS(0.0)PFMQK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T PBK 37553.1 5 3 2474.1 81.89 HUMAN 1 1.705 -17.4096 KKSVSMLSLNTPNSN-p Q9H8V3;S370-p KKSVSMLSLNTPNSN 0.860894111325596 0.0810207942698769 -0.0253333333333333 -0.32 1.27067518324883 14.4736628795536 -0.0253333333333333 -0.32 0.746332719513876 0.0356971637993752 -0.340461038980116 -2.77857105839421 Q9H8V3 ECT2 Q9H8V3.S370.p_ECT2 Q9H8V3_S370s _1_1_370_370 Q9H8V3 Q9H8V3|Q9H8V3-4|Q9H8V3-2 Protein ECT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18382.18382.3 15.26 12.8 2.853 5 1 1 0 610.2996 1748.9162 S370s TMT10 365 (K) SVSMLsLNTPNSNR (K) S(0.0)VS(0.0)MLS(0.99)LNT(0.0)PNS(0.0)NR s:Phosphorylated S ECT2 104530 2 6 572.1 269.2 HUMAN 1 -1.2707 -14.4737 KKTEMDKSPFNSPSP-p P08651;S333-p KKTEMDKSPFNSPSP 0.75302080919048 0.615020805593117 -0.0576666666666667 0.067 2.35077496328721 2.8677410658311 -0.0576666666666667 0.067 0.581999355438747 0.516685047338976 -0.585154868438412 0.693323690043362 P08651 NFIC P08651.S333.p_NFIC P08651_S333s_1_1_333_333 P08651 A0A286YEX4|P08651|P08651-2|P08651-6|P08651-3|P08651-5|P08651-4 Nuclear factor 1 C-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9923.9923.3 11.23 11.23 2.82 5 1 1 0 858.737 2478.2335 M330m S333s TMT10 328 (K) TEmDKsPFNSPSPQDSPR (L) T(0.0)EM(1.0)DKS(0.99)PFNS(0.0)PS(0.0)PQDS(0.0)PR K:TMT10,m:Oxidized methionine,s:Phosphorylated S NFIC 56130.4 7 9 674.1 247.72 HUMAN 1 -2.3508 2.8677 KKTGKTVSYLGLE__-p E5RIM7;S68-p KKTGKTVSYLGLE__ 0.376812775473023 0.41855285329816 -0.151 -0.126 7.83607666671837 5.03423452240168 -0.151 -0.126 0.164585788836315 0.313744808090493 -1.60671084700489 -1.11010241693967 E5RIM7 NotFound E5RIM7.S68.p_NotFound E5RIM7_S68s _1_1_68_68 E5RIM7 E5RIM7|O00244 Copper transport protein ATOX1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25055.25055.2 9.42 9.42 1.74 3 1 1 0 595.7992 1110.6244 S68s TMT10 66 (K) TVsYLGLE (-) T(0.0)VS(0.99)Y(0.0)LGLE s:Phosphorylated S ATOX1 8045.2 1 1 6800.1 9.42 HUMAN 1 -7.8361 -5.0342 KKTGSPGSPGAGGVQ-p O43237;S446-p KKTGSPGSPGAGGVQ 0.712330814255611 0.0116562949693482 -0.052 -0.505 2.77137620616906 27.0415414377518 -0.052 -0.505 0.528277822891926 0.00197626808044965 -0.673580969330422 -5.57241579008254 O43237 DYNC1LI2 O43237.S446.p_DYNC1LI2 O43237_S446s _1_1_446_446 O43237 O43237|O43237-2 Cytoplasmic dynein 1 light intermediate chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7472.7472.5 16.69 13.17 2.494 5 1 1 0 543.1115 2631.56 S446s TMT10 440 (K) KTGSPGsPGAGGVQSTAKK (S) KT(0.0)GS(0.0)PGS(0.99)PGAGGVQS(0.0)T(0.0)AKK K:TMT10,s:Phosphorylated S DYNC1LI2 54383.6 4 8 576.1 267.98 HUMAN 1 -2.7714 -27.0415 KKTKQDRTPLTKDVS-p O00203;T810-p KKTKQDRTPLTKDVS 0.105022846104619 0.00293914781681566 -0.361 -0.765 20.621834176878 38.1900994801648 -0.361 -0.765 0.00866595804866258 0.000151701561806731 -4.0136918749377 -9.34635252968224 O00203 AP3B1 O00203.T810.p_AP3B1 O00203_T810t _1_1_810_810 O00203 O00203|O00203-3 AP-3 complex subunit beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6630.6630.5 10.72 10.77 3.61 3 1 1 0 463.2838 2232.421 T810t TMT10 804 (K) KTKQDRtPLTK (D) KT(0.0)KQDRT(0.99)PLT(0.0)K K:TMT10,t:Phosphorylated T AP3B1 121888.5 5 8 445.1 310.27 HUMAN 1 -20.6218 -38.1901 KKTPEEPSPKDSEKS-p Q96A29;S353-p KKTPEEPSPKDSEKS 0.163338476514576 0.162856002020622 -0.271 0.271333333333333 15.7641414973183 10.3625607930331 -0.271 0.271333333333333 0.026520752969369 0.0919906993809939 -3.02303284596481 2.04391556301475 Q96A29 SLC35C1 Q96A29.S353.p_SLC35C1 Q96A29_S353s _1_1_353_353 Q96A29 Q96A29|Q96A29-2 GDP-fucose transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7503.7503.4 8.95 4.83 8.946 3 1 1 0 617.8426 2388.3792 S353s TMT10 347 (K) KTPEEPsPKDSEK (S) KT(0.0)PEEPS(0.99)PKDS(0.0)EK K:TMT10,s:Phosphorylated S SLC35C1 40321.6 1 1 6873.1 8.95 HUMAN 1 -15.7641 10.3626 KKTQDQISNIKYHEE-p Q14847-2;S118-p KKTQDQISNIKYHEE 0.225804320873438 0.0609776372814634 -0.318 0.245666666666667 12.4051918672564 16.182988923697 -0.318 0.245666666666667 0.0574752426257833 0.0240824744184563 -2.40441748074191 3.10118295456532 Q14847 LASP1 Q14847.2.S118.p_LASP1 Q14847-2_S118s _1_1_118_118 Q14847-2 Q14847-2|Q14847-3 Isoform 2 of LIM and SH3 domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11243.11243.3 10.15 4.99 3.182 2 1 1 0 648.0381 1862.1314 S118s TMT10 112 (K) KTQDQIsNIK (Y) KT(0.0)QDQIS(0.99)NIK K:TMT10,s:Phosphorylated S LASP1 36812.2 2 5 1322.1 154.29 HUMAN 1 -12.4052 16.183 KKTQETLSQAGQKTS-p O43399-2;S114-p KKTQETLSQAGQKTS 0.348690275429054 0.123825551860941 0.129333333333333 -0.335666666666667 8.50393603402315 11.9679357750444 0.129333333333333 -0.335666666666667 0.14112579342683 0.0635632979826568 1.72248815027715 -2.32549190530854 O43399 TPD52L2 O43399.2.S114.p_TPD52L2 O43399-2_S114s _1_1_114_114 O43399-2 O43399-7|A0A087WYR3|O43399-5|O43399-3|O43399-4|O43399-2|O43399-6 Isoform 2 of Tumor protein D54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8634.8634.3 12.16 12.16 4.002 3 1 1 0 696.0557 2006.1849 S114s TMT10 108 (K) KTQETLsQAGQK (T) KT(0.0)QET(0.0)LS(0.99)QAGQK K:TMT10,s:Phosphorylated S TPD52L2 19957.8 3 13 793.1 224.4 HUMAN 1 8.5039 -11.9679 KKTRSIGSAVDQGNE-p Q9H0H5;S206-p KKTRSIGSAVDQGNE 0.293673344017078 0.099112006217588 0.177333333333333 0.19 10.0422739018852 13.2663919852331 0.177333333333333 0.19 0.0990313295683279 0.0471368765680884 1.98905585228133 2.5577441209236 Q9H0H5 RACGAP1 Q9H0H5.S206.p_RACGAP1 Q9H0H5_S206s _1_1_206_206 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18552.18819.2 16.34 16.34 3.305 3 1 1 0 1057.0486 2033.1279 S206s TMT10 203 (R) SIGsAVDQGNESIVAK (T) S(0.0)IGS(0.99)AVDQGNES(0.0)IVAK K:TMT10,s:Phosphorylated S RACGAP1 71709.9 1 6 574.1 268.64 HUMAN 1 10.0423 13.2664 KKTSETLSQAGQKAS-p P55327;S144-p KKTSETLSQAGQKAS 0.149024470822507 0.0816154540949912 0.247333333333333 -0.251333333333333 16.6782717579186 14.4266320844787 0.247333333333333 -0.251333333333333 0.0214868535712749 0.0360858377040495 3.19953347364808 -2.76986785260453 P55327 TPD52 P55327.S144.p_TPD52 P55327_S144s _1_1_144_144 P55327 H0YC42|P55327-3|P55327-6|P55327-5|P55327-7|P55327-4|P55327-2 Tumor protein D52 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8852.8852.3 10.8 10.8 5.646 4 1 1 0 682.3796 1965.1584 S144s TMT10 138 (K) KTSETLsQAGQK (A) KT(0.0)S(0.0)ET(0.0)LS(0.99)QAGQK K:TMT10,s:Phosphorylated S TPD52 24383.6 3 3 1260.1 161.11 HUMAN 1 16.6783 -14.4266 KKTSGPLSPPTGPPG-p P49815-4;S664-p KKTSGPLSPPTGPPG 0.972698560577025 0.134068049684981 -0.0103333333333334 -0.166333333333333 0.234473333464127 11.5015383795432 -0.0103333333333334 -0.166333333333333 0.947442073318367 0.07076950567122 -0.0690337124600068 -2.24315533627208 P49815 TSC2 P49815.4.S664.p_TSC2 P49815-4_S664s _1_1_664_664 P49815-4 P49815|P49815-4|P49815-2 Isoform 4 of Tuberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18060.18060.3 19.61 19.61 2.265 4 1 1 0 764.0652 2210.2131 S664s TMT10 659 (K) TSGPLsPPTGPPGPAPAGPAVR (L) T(0.0)S(0.0)GPLS(0.99)PPT(0.0)GPPGPAPAGPAVR s:Phosphorylated S TSC2 200147.7 1 2 214.1 435.34 HUMAN 1 -0.2345 -11.5015 KKVAGAATPKKSIKK-p P16402;T147-p KKVAGAATPKKSIKK 0.109740616480758 0.000952253650599092 -0.378 -2.395 20.0919773873634 61.4262248268454 -0.378 -2.395 0.00979044115074669 7.20074642248906e-07 -3.89871756577933 -25.6430280144116 P16402 HIST1H1D P16402.T147.p_HIST1H1D P16402_T147t _1_1_147_147 P16402 P16402 Histone H1.3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7151.7151.3 12.69 8.64 99 1 1 1 0 537.3282 1529.9982 T147t TMT10 141 (K) KVAGAAtPK (K) KVAGAAT(1.0)PK K:TMT10,t:Phosphorylated T HIST1H1D 22349.5 18 23 738.1 234.77 HUMAN 1 -20.092 -61.4262 KKVAIIRTPPKSPAT-p P11137;T1649-p KKVAIIRTPPKSPAT 0.975009344981545 0.0175254468150283 0.00499999999999999 0.437 0.213216449172309 24.2081277230877 0.00499999999999998 0.437 0.952090770335888 0.00379478545834584 0.0629177328559578 4.8401821531917 P11137 MAP2 P11137.T1649.p_MAP2 P11137_T1649t _1_1_1649_1649 P11137 P11137|P11137-3|P11137-4|P11137-2 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13228.13439.5 15.26 10.01 5.944 3 1 1 0 540.9398 2620.7048 T1649t TMT10 1643 (K) KVAIIRtPPKSPATPK (Q) KVAIIRT(0.99)PPKS(0.0)PAT(0.0)PK K:TMT10,t:Phosphorylated T MAP2 199979.2 9 18 117.1 560.28 HUMAN 1 0.2132 24.2081 KKVAVVRTPPKSPSS-p P10636;T548-p KKVAVVRTPPKSPSS 0.726261487694244 0.0340853782254752 0.059 0.338333333333333 2.63433150220659 19.7755327258805 0.059 0.338333333333333 0.545213812523217 0.0105304450785301 0.645109321937622 3.82741175484359 P10636 MAPT P10636.T548.p_MAPT P10636_T548t _1_1_548_548 P10636 P10636-9|A0A0G2JMX7|A0A0G2JS76|A0A0G2JPD5|A0A0G2JQJ7|P10636-8|P10636-7|P10636-5|P10636-6|P10636-4|P10636-2|I3L170|P10636-3 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10409.10613.4 16.68 10.76 5.827 4 1 1 0 573.5924 2211.3792 T548t TMT10 543 (K) VAVVRtPPKSPSSAK (S) VAVVRT(0.99)PPKS(0.0)PS(0.0)S(0.0)AK K:TMT10,t:Phosphorylated T MAPT 79154.4 19 17 119.1 551.6 HUMAN 1 2.6343 19.7755 KKVDAQSSAGEEDVL-p Q8NFA0;S1350-p KKVDAQSSAGEEDVL 0.885820345057877 0.350537128992444 0.0276666666666667 -0.0923333333333333 1.03530648154083 6.03539233550337 0.0276666666666667 -0.0923333333333333 0.787896827623863 0.249149928255939 0.282711388833892 -1.29055728988431 Q8NFA0 USP32 Q8NFA0.S1350.p_USP32 Q8NFA0_S1350s _1_1_1350_1350 Q8NFA0 Q8NFA0|K7EQL6 Ubiquitin carboxyl-terminal hydrolase 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17729.17729.3 13.87 13.87 1.198 3 1 1 0 848.458 2463.3909 S1350s TMT10 1344 (K) KVDAQSsAGEEDVLLSK (S) KVDAQS(0.0)S(0.99)AGEEDVLLS(0.0)K K:TMT10,s:Phosphorylated S USP32 183934.5 2 3 1352.1 150.83 HUMAN 1 1.0353 -6.0354 KKVKRRKTITGVPDN-p Q5SYE7-2;T209-p KKVKRRKTITGVPDN 0.351708899888029 0.0545110023836057 0.179333333333333 -0.282 8.43158959172915 16.8449485623545 0.179333333333333 -0.282 0.143496411592964 0.0206778387251474 1.70995996065911 -3.22972514327742 Q5SYE7 NHSL1 Q5SYE7.2.T209.p_NHSL1 Q5SYE7-2_T209t _1_1_209_209 Q5SYE7-2 Q5SYE7-2 Isoform 2 of NHS-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17820.17820.2 14.97 14.97 3.509 2 1 1 0 862.474 1643.9732 T209t TMT10 209 (K) tITGVPDNIQK (E) T(0.99)IT(0.0)GVPDNIQK K:TMT10,t:Phosphorylated T NHSL1 171957.1 5 3 747.1 232.6 HUMAN 1 8.4316 -16.8449 KKVQDGLSDIAEKFL-p P46100;S962-p KKVQDGLSDIAEKFL 0.615123191884599 0.242964992347711 -0.08 0.115666666666667 3.91706797892598 8.09508214385581 -0.08 0.115666666666667 0.405782395941294 0.155057145850936 -0.901243539682102 1.65112099424306 P46100 ATRX P46100.S962.p_ATRX P46100_S962s _1_1_962_962 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16974.16974.3 13.76 9.78 99 1 1 1 0 690.7197 1990.1788 S962s TMT10 956 (K) KVQDGLsDIAEK (F) KVQDGLS(1.0)DIAEK K:TMT10,s:Phosphorylated S ATRX 285034.2 3 28 18.1 1035.36 HUMAN 1 -3.9171 8.0951 KKVTLSYSKNLKPSS-p A0A0A0MR88;S522-p KKVTLSYSKNLKPSS 0.513829023087372 0.461924765082517 -0.139666666666667 -0.094 5.34171000735643 4.47355156242383 -0.139666666666667 -0.094 0.292300123777774 0.356980787906793 -1.16632590756845 -1.00644869868672 A0A0A0MR88 NotFound A0A0A0MR88.S522.p_NotFound A0A0A0MR88_S522s _1_1_522_522 A0A0A0MR88 A0A0A0MR88|A0A096LPC5|Q9Y4E1-4|Q9Y4E1-2|Q9Y4E1-6|Q9Y4E1-3|J3KP36|Q9Y4E1-5 WASH complex subunit 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14680.14680.3 8.92 8.92 1.141 4 1 1 0 565.0035 1613.0241 S522s TMT10 516 (K) KVTLSYsK (N) KVT(0.0)LS(0.0)Y(0.0)S(0.99)K K:TMT10,s:Phosphorylated S WASHC2C 147223 1 5 12.99 1178.3 HUMAN 1 -5.3417 -4.4736 KKVTNIISFDDEEDE-p Q8TEQ0;S268-p KKVTNIISFDDEEDE 0.186234239336068 0.187834387777523 -0.243666666666667 0.139333333333333 14.347688362562 9.55314991239786 -0.243666666666667 0.139333333333333 0.0367477847424947 0.110837062894731 -2.75698118422816 1.90343928753727 Q8TEQ0 SNX29 Q8TEQ0.S268.p_SNX29 Q8TEQ0_S268s _1_1_268_268 Q8TEQ0 Q8TEQ0|Q8TEQ0-2 Sorting nexin-29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23127.23127.5 20.89 20.89 4.67 3 1 1 0 731.5825 3573.9094 S268s TMT10 262 (K) KVTNIIsFDDEEDEQNSGDVFKK (T) KVT(0.0)NIIS(0.99)FDDEEDEQNS(0.0)GDVFKK K:TMT10,s:Phosphorylated S SNX29 91651.5 5 1 764.1 229.17 HUMAN 1 -14.3477 9.5531 KKWERKFSDAIQSKE-p Q14789-2;S2221-p KKWERKFSDAIQSKE 0.141525291296506 0.00234769441382231 0.255 0.890666666666667 17.3642681147867 40.4297779967089 0.255 0.890666666666667 0.018347343356302 9.05778901453701e-05 3.33472848042708 10.3263727756288 Q14789 GOLGB1 Q14789.2.S2221.p_GOLGB1 Q14789-2_S2221s _1_1_2221_2221 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17154.17154.3 10.81 5.82 3.673 2 1 1 0 816.446 2367.3487 S2221s TMT10 2219 (R) KFsDAIQSKEEEIR (L) KFS(0.99)DAIQS(0.0)KEEEIR K:TMT10,s:Phosphorylated S GOLGB1 378557.2 2 21 93.1 610.98 HUMAN 1 17.3643 40.4298 KKYDDDISPSEDKDT-p Q07866-6;S162-p KKYDDDISPSEDKDT 0.167219772467037 0.386624143362716 -0.224666666666667 0.113333333333333 15.5370858302652 5.48625532069842 -0.224666666666667 0.113333333333333 0.0279441830154636 0.282731676190005 -2.97980215818362 1.19220656811461 Q07866 KLC1 Q07866.6.S162.p_KLC1 Q07866-6_S162s _1_1_162_162 Q07866-6 F8W6L3|Q07866|Q07866-3|Q07866-2|Q07866-8|G3V2E7|G3V5R9|Q07866-6|Q07866-10|Q07866-5|G3V3H3|Q07866-7|G5E9S8 Isoform N of Kinesin light chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11233.11233.3 10 5.01 1.357 3 1 1 0 727.0331 2099.1111 S162s TMT10 156 (K) KYDDDIsPSEDK (D) KY(0.0)DDDIS(0.99)PS(0.0)EDK K:TMT10,s:Phosphorylated S KLC1 71518.1 1 5 1242.1 162.93 HUMAN 1 -15.5371 5.4863 KKYLLSQSSPAPLTA-p Q12792-3;S142-p KKYLLSQSSPAPLTA 0.792181181183661 0.387530305422007 -0.0393333333333333 -0.086 1.9519465738745 5.47337050696822 -0.0393333333333333 -0.086 0.637977470898326 0.28357174082297 -0.498133770176353 -1.18988176701306 Q12792 TWF1 Q12792.3.S142.p_TWF1 Q12792-3_S142s _1_1_142_142 Q12792-3 Q12792-3|Q12792-4 Isoform 3 of Twinfilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29382.29382.4 7.21 7.21 1.263 5 1 1 0 835.7198 3259.8869 S142s TMT10 136 (K) KYLLSQsSPAPLTAAEEELRQIK (I) KY(0.0)LLS(0.0)QS(0.99)S(0.0)PAPLT(0.0)AAEEELRQIK K:TMT10,s:Phosphorylated S TWF1 41188.9 8 1 2118.1 96.9 HUMAN 1 -1.9519 -5.4734 KKYRGMGSLDAMDKH-p P12268;S416-p KKYRGMGSLDAMDKH 0.567656016658623 0.261741524823828 0.081 -0.175333333333333 4.52777953977284 7.66880438580215 0.081 -0.175333333333333 0.352551077236732 0.17104861477001 1.01676341362693 -1.57717040739487 P12268 IMPDH2 P12268.S416.p_IMPDH2 P12268_S416s _1_1_416_416 P12268 P12268 Inosine-5'-monophosphate dehydrogenase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17420.17420.2 10.21 7.67 99 1 1 1 0 781.8718 1482.7697 S416s TMT10 413 (R) GMGsLDAMDK (H) GMGS(1.0)LDAMDK K:TMT10,s:Phosphorylated S IMPDH2 56260.4 11 4 1929.1 106.46 HUMAN 1 4.5278 -7.6688 KKYRGMGSLDAMEKS-p P20839-6;S501-p KKYRGMGSLDAMEKS 0.864901984525087 0.442987624891513 -0.036 -0.109333333333333 1.22514631946706 4.70944771949809 -0.036 -0.109333333333333 0.754197985507145 0.338107829727011 -0.329438057021456 -1.05033144529769 P20839 IMPDH1 P20839.6.S501.p_IMPDH1 P20839-6_S501s _1_1_501_501 P20839-6 P20839-6|P20839-5|P20839-7|P20839-3 Isoform 6 of Inosine-5'-monophosphate dehydrogenase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17676.17676.3 7.9 7.9 99 1 1 1 0 526.2555 1496.7853 S501s TMT10 498 (R) GMGsLDAMEK (S) GMGS(1.0)LDAMEK K:TMT10,s:Phosphorylated S IMPDH1 64718.1 1 2 4351.1 32.98 HUMAN 1 -1.2251 -4.7094 KLACRTPSPARPALR-p Q9H211;S31-p KLACRTPSPARPALR 0.120581410713125 0.00129870598737143 -0.272333333333333 -1.12866666666667 19.1003487344793 47.0473180634795 -0.272333333333333 -1.12866666666667 0.0123016998532653 1.97364115967067e-05 -3.68848020911933 -13.8053765351317 Q9H211 CDT1 Q9H211.S31.p_CDT1 Q9H211_S31s _1_1_31_31 Q9H211 Q9H211 DNA replication factor Cdt1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8007.8007.4 9.25 9.25 1.24 6 1 1 0 565.8005 2180.2097 S31s TMT10 29 (R) TPsPARPALRAPASATSGSR (K) T(0.0)PS(0.99)PARPALRAPAS(0.0)AT(0.0)S(0.0)GS(0.0)R s:Phosphorylated S CDT1 60959.8 2 1 1732.1 118.73 HUMAN 1 -19.1003 -47.0473 KLADCEQSPTSSRTS-p Q9NYQ6;S2960-p KLADCEQSPTSSRTS 0.594257747309933 0.212923204289966 0.0736666666666667 0.151666666666667 4.16763645251279 8.83912804916006 0.0736666666666667 0.151666666666667 0.383033143551551 0.130643315974491 0.949040863995625 1.77988779379255 Q9NYQ6 CELSR1 Q9NYQ6.S2960.p_CELSR1 Q9NYQ6_S2960s _1_1_2960_2960 Q9NYQ6 Q9NYQ6 Cadherin EGF LAG seven-pass G-type receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7507.7507.2 15.83 15.83 1.938 4 1 1 0 830.3643 1579.7584 S2960s TMT10 2954 (K) LADCEQsPTSSR (T) LADCEQS(0.99)PT(0.0)S(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S CELSR1 334558.1 4 6 1317.1 154.7 HUMAN 1 4.1676 8.8391 KLADFGVSGELTASV-p Q12851;S158-p KLADFGVSGELTASV 0.37802357809389 0.972194828300654 -0.148 0.00633333333333338 7.80842655632781 0.173004912898177 -0.148 0.00633333333333339 0.165636995561279 0.960947162469051 -1.60190919627392 0.0512687615417225 Q12851 MAP4K2 Q12851.S158.p_MAP4K2 Q12851_S158s _1_1_158_158 Q12851 Q12851|Q12851-2 Mitogen-activated protein kinase kinase kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28850.28850.3 7.49 7.49 1.775 3 1 1 0 701.7126 2023.1476 S158s TMT10 152 (K) LADFGVsGELTASVAK (R) LADFGVS(0.99)GELT(0.0)AS(0.0)VAK K:TMT10,s:Phosphorylated S MAP4K2 92524.2 1 1 1581.1 129.87 HUMAN 1 -7.8084 0.173 KLAEEHSS_______-p P06576;S529-p KLAEEHSS_______ 0.0741079994118013 0.924008297303965 0.660666666666667 -0.0106666666666666 24.252775376323 0.484314450572186 0.660666666666667 -0.0106666666666666 0.00375597300614073 0.89447571699145 4.85698331439645 -0.13898862175993 P06576 ATP5B P06576.S529.p_ATP5B P06576_S529s _1_1_529_529 P06576 P06576 ATP synthase subunit beta, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7210.7210.3 13.16 13.16 1.287 2 1 1 0 542.27 1544.8321 S529s TMT10 520 (K) ADKLAEEHSs (-) ADKLAEEHS(0.0)S(0.99) K:TMT10,s:Phosphorylated S ATP5B 56558.9 4 5 2156.1 95.32 HUMAN 1 24.2528 -0.4843 KLAGESESNLRKAFE-p P55072;S284-p KLAGESESNLRKAFE 0.388754166810574 0.0463778603973881 -0.136333333333333 0.324666666666667 7.59148446505429 17.8454646479635 -0.136333333333333 0.324666666666667 0.174121160688668 0.0164230394157632 -1.56420271971846 3.42828128052222 P55072 VCP P55072.S284.p_VCP P55072_S284s _1_1_284_284 P55072 P55072 Transitional endoplasmic reticulum ATPase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10160.10160.3 10.4 10.4 2.264 2 1 1 0 581.3143 1661.9587 S284s TMT10 278 (K) LAGESEsNLRK (A) LAGES(0.0)ES(0.99)NLRK K:TMT10,s:Phosphorylated S VCP 90004.9 1 6 803.1 222.64 HUMAN 1 -7.5915 17.8455 KLAPDRESLLLKHIG-p Q13017;S540-p KLAPDRESLLLKHIG 0.727199571738842 0.725607173427623 -0.0476666666666667 0.0436666666666667 2.62322376293177 1.91715698968405 -0.0476666666666667 0.0436666666666667 0.546610064243111 0.643108575991015 -0.642787799553049 0.490320613663401 Q13017 ARHGAP5 Q13017.S540.p_ARHGAP5 Q13017_S540s _1_1_540_540 Q13017 Q13017|Q13017-2|A0A0A0MSK6 Rho GTPase-activating protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19911.19911.3 13.58 13.58 99 1 1 1 0 598.3494 1713.0675 S540s TMT10 534 (K) LAPDREsLLLK (H) LAPDRES(1.0)LLLK K:TMT10,s:Phosphorylated S ARHGAP5 173940.2 2 2 639.1 255.25 HUMAN 1 -2.6232 1.9172 KLAPSFPSPPAVSIA-p Q7Z3K3;S292-p KLAPSFPSPPAVSIA 0.256105749737423 0.0150452882196435 -0.173666666666667 -0.515 11.2368349767635 25.21690708436 -0.173666666666667 -0.515 0.0752170856535692 0.00300821790292488 -2.19765389807872 -5.09249520203031 Q7Z3K3 POGZ Q7Z3K3.S292.p_POGZ Q7Z3K3_S292s _1_1_292_292 Q7Z3K3 Q7Z3K3|Q7Z3K3-3 Pogo transposable element with ZNF domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37119.37119.3 16.61 16.61 2.203 5 1 1 0 851.8122 2473.4471 S292s TMT10 286 (K) LAPSFPsPPAVSIASFVTVK (R) LAPS(0.0)FPS(0.99)PPAVS(0.0)IAS(0.0)FVT(0.0)VK K:TMT10,s:Phosphorylated S POGZ 157451.9 1 3 811.1 221.02 HUMAN 1 -11.2368 -25.2169 KLAVRPLSVQAEILK-p Q12923-4;S926-p KLAVRPLSVQAEILK 0.155631008659744 0.04276017229564 -0.346666666666667 -0.295333333333333 16.2355463118824 18.3413813554005 -0.346666666666667 -0.295333333333333 0.0237927898558547 0.0146508176998628 -3.11354926568433 -3.52872857455527 Q12923 PTPN13 Q12923.4.S926.p_PTPN13 Q12923-4_S926s _1_1_926_926 Q12923-4 Q12923-4|Q12923-3 Isoform 4 of Tyrosine-protein phosphatase non-receptor type 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25770.25770.3 14.75 6.84 99 1 1 1 0 692.4188 1995.2731 S926s TMT10 920 (K) LAVRPLsVQAEILK (R) LAVRPLS(1.0)VQAEILK K:TMT10,s:Phosphorylated S PTPN13 279614.3 1 5 518.1 284.65 HUMAN 1 -16.2355 -18.3414 KLCATRRSAGIPFYI-p Q6YHU6;S1161-p KLCATRRSAGIPFYI 0.135315375934205 0.0131822884002457 -0.395333333333333 -0.368 17.8153882036351 26.1788483598971 -0.395333333333333 -0.368 0.016537169570521 0.00241054455993506 -3.42499936982469 -5.34159311999393 Q6YHU6 THADA Q6YHU6.S1161.p_THADA Q6YHU6_S1161s _1_1_1161_1161 Q6YHU6 Q6YHU6|Q6YHU6-3|Q6YHU6-2 Thyroid adenoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.37123.37123.3 22.38 22.38 9.53 3 1 1 0 781.7626 2263.3102 S1161s TMT10 1161 (R) sAGIPFYIQALLASEPK (K) S(0.99)AGIPFY(0.0)IQALLAS(0.0)EPK K:TMT10,s:Phosphorylated S THADA 223026.5 1 2 3808.1 42.65 HUMAN 1 -17.8154 -26.1788 KLCDFGISGRLVDSK-p O14733-2;S308-p KLCDFGISGRLVDSK 0.228808163463225 0.100831826845669 -0.182333333333333 -0.180333333333333 12.3091458361361 13.1628918867831 -0.182333333333333 -0.180333333333333 0.0587604910416722 0.0482737249170824 -2.38729152514935 -2.53904702185321 O14733 MAP2K7 O14733.2.S308.p_MAP2K7 O14733-2_S308s _1_1_308_308 O14733-2 O14733-2|O14733-3|O14733-4 Isoform 2 of Dual specificity mitogen-activated protein kinase kinase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19620.19620.2 8.86 6.09 99 1 1 1 0 667.3129 1253.651 S308s TMT10 302 (K) LCDFGIsGR (L) LCDFGIS(1.0)GR C:Carbamidomethylation,s:Phosphorylated S MAP2K7 52336.2 1 2 2820.1 69.41 HUMAN 1 -12.3091 -13.1629 KLCDFGVSGQLIDSM-p P36507;S216-p KLCDFGVSGQLIDSM 0.352797825634367 0.535810141917316 0.137333333333333 0.0843333333333334 8.40313054931902 3.64639991222627 0.137333333333333 0.0843333333333334 0.144439822171127 0.431876933232951 1.70503113313724 0.84877023243763 P36507 MAP2K2 P36507.S216.p_MAP2K2 P36507_S216s _1_1_216_216 P36507 P36507|Q02750|Q02750-2|G5E9C7|H3BRW9 Dual specificity mitogen-activated protein kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36513.36513.3 17.7 17.7 4.907 4 1 1 0 895.0854 2603.2795 S216s TMT10 210 (K) LCDFGVsGQLIDSMANSFVGTR (S) LCDFGVS(0.99)GQLIDS(0.0)MANS(0.0)FVGT(0.0)R C:Carbamidomethylation,s:Phosphorylated S MAP2K2 44708.6 1 2 1640.1 124.72 HUMAN 1 8.4031 3.6464 KLDADAVSPTVSQLS-p D3DTX6;S205-p KLDADAVSPTVSQLS 0.253428545649867 0.856030800980723 -0.183 -0.028 11.3588889232855 0.951732943991349 -0.183 -0.028 0.0731326158283429 0.803205559054862 -2.21910732524022 -0.261701323056245 D3DTX6 PPP1R9B D3DTX6.S205.p_PPP1R9B D3DTX6_S205s _1_1_205_205 D3DTX6 D3DTX6|Q96SB3 Neurabin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37121.37121.4 14.26 14.26 1.206 6 1 1 0 895.2084 3497.8416 S205s Hydrogen 189 (R) FNGSTEALDKLDADAVsPTVSQLSAVFEK (A) FNGS(0.0)T(0.0)EALDKLDADAVS(0.99)PT(0.0)VS(0.0)QLS(0.0)AVFEK K:TMT10-Lys-Only,s:Phosphorylated S PPP1R9B 89503.8 4 5 1790.1 114.58 HUMAN 1 -11.3589 -0.9517 KLDFAPPTPPHYPPH-p Q86Y56;T334-p KLDFAPPTPPHYPPH 0.098585545380902 0.813260985454018 -0.344666666666667 -0.035 21.3001851943956 1.25681371022807 -0.344666666666667 -0.0349999999999999 0.00741278630589588 0.748718611686453 -4.1637077990245 -0.337077804737662 Q86Y56 DNAAF5 Q86Y56.T334.p_DNAAF5 Q86Y56_T334t _1_1_334_334 Q86Y56 Q86Y56|Q86Y56-2 Dynein assembly factor 5, axonemal HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16471.16471.5 12.73 12.73 6.422 2 1 1 0 531.2737 2572.3713 T334t TMT10 326 (K) DKLDFAPPtPPHYPPHER (R) DKLDFAPPT(0.99)PPHY(0.0)PPHER K:TMT10,t:Phosphorylated T DNAAF5 94831.7 5 1 5042.1 23.58 HUMAN 1 -21.3002 -1.2568 KLDFPAVTICNINPY-p P51170;T98-p KLDFPAVTICNINPY 0.390849504034051 0.0287297164472334 -0.217666666666667 0.355 7.53831203449388 20.8772938328225 -0.217666666666667 0.355 0.176266100396182 0.00817091357111795 -1.55495107135901 4.06578874419675 P51170 SCNN1G P51170.T98.p_SCNN1G P51170_T98t_1_1_98_98 P51170 P51170 Amiloride-sensitive sodium channel subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11263.11263.4 8.44 4.4 3.487 2 1 1 0 666.1149 2580.4827 T98t N103n TMT10 91 (R) KLDFPAVtICNInPYK (Y) KLDFPAVT(0.99)ICN(0.0)IN(0.99)PY(0.0)K K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,n:Deamidated SCNN1G 75524.1 1 1 6964.1 8.44 HUMAN 1 -7.5383 20.8773 KLDKDNLSYIEHIFE-p Q15121-2;S82-p KLDKDNLSYIEHIFE 0.168042147475341 0.0315775207627558 -0.370333333333333 0.327333333333333 15.4631114247607 20.2741622216823 -0.370333333333333 0.327333333333333 0.0284242397423127 0.00938823123430553 -2.96576781450534 3.93429106692028 Q15121 PEA15 Q15121.2.S82.p_PEA15 Q15121-2_S82s _1_1_82_82 Q15121-2 Q15121-2 Isoform 2 of Astrocytic phosphoprotein PEA-15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.33214.33214.2 17.61 17.61 6.226 3 1 1 0 1022.9973 1965.0279 S82s TMT10 79 (K) DNLsYIEHIFEISR (R) DNLS(0.99)Y(0.0)IEHIFEIS(0.0)R s:Phosphorylated S PEA15 17420.4 1 1 1203.1 166.92 HUMAN 1 -15.4631 20.2742 KLDKENLSDERASGQ-p Q9BZI7;S310-p KLDKENLSDERASGQ 0.388754166810574 0.173427485358535 -0.156333333333333 0.143333333333333 7.59162977681182 10.0041372556954 -0.156333333333333 0.143333333333333 0.174115334819437 0.0999047815286813 -1.56422799734238 1.98162752197055 Q9BZI7 UPF3B Q9BZI7.S310.p_UPF3B Q9BZI7_S310s _1_1_310_310 Q9BZI7 Q9BZI7|Q9BZI7-2 Regulator of nonsense transcripts 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10867.10867.3 17.19 11.13 3.136 4 1 1 0 810.7291 2350.2073 S310s TMT10 307 (K) ENLsDERASGQSCTLPK (R) ENLS(0.99)DERAS(0.0)GQS(0.0)CT(0.0)LPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UPF3B 57875.1 6 3 2501.1 81.05 HUMAN 1 -7.5916 10.0041 KLDKLENSAAPKKKG-p Q13435;S416-p KLDKLENSAAPKKKG 0.232413765653254 0.1028263271808 -0.434333333333333 -0.248333333333333 12.1802311642857 13.0481031740982 -0.434333333333333 -0.248333333333333 0.0605308654803477 0.0495666631043827 -2.36434393115218 -2.51835064171504 Q13435 SF3B2 Q13435.S416.p_SF3B2 Q13435_S416s _1_1_416_416 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13765.13765.5 11.04 11.04 99 1 1 1 0 631.1671 3071.8325 S416s TMT10 404 (K) EKEPEKLDKLENsAAPK (K) EKEPEKLDKLENS(1.0)AAPK K:TMT10,s:Phosphorylated S SF3B2 100339.9 1 12 193.1 462.57 HUMAN 1 -12.1802 -13.0481 KLDLLRAYQILNSYK-p Q14703;Y472-p KLDLLRAYQILNSYK 0.405599270487362 0.208448492321714 -0.121333333333333 -0.15 7.23707447551353 8.95977772176379 -0.121333333333333 -0.15 0.18892635793257 0.127063913670453 -1.50245136292897 -1.80075545253825 Q14703 MBTPS1 Q14703.Y472.p_MBTPS1 Q14703_Y472y_1_1_472_472 Q14703 Q14703 Membrane-bound transcription factor site-1 protease HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18820.18820.5 7.65 7.65 7.652 3 1 1 0 760.7953 3719.062 Y472y N476n Hydrogen 452 (R) RLPGVNMFEQGHGKLDLLRAyQILnSYK (P) RLPGVN(0.0)MFEQGHGKLDLLRAY(0.99)QILN(0.99)S(0.0)Y(0.0)K K:TMT10-Lys-Only,y:Phosphorylated Y,n:Deamidated MBTPS1 118488.1 1 1 6024.1 14.57 HUMAN 1 -7.2371 -8.9598 KLDNARQSAERNSNL-p P02545;S277-p KLDNARQSAERNSNL 0.486093065914574 0.194141900858478 0.0996666666666667 0.192 5.77163788260186 9.36067268563879 0.0996666666666667 0.192 0.26475014811092 0.115859788518481 1.24377389742225 1.8701146911062 P02545 LMNA P02545.S277.p_LMNA P02545_S277s _1_1_277_277 P02545 P02545 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4396.4396.3 10.54 10.54 99 1 1 1 0 490.2416 1388.7444 S277s TMT10 271 (K) LDNARQsAER (N) LDNARQS(1.0)AER s:Phosphorylated S LMNA 74423.5 6 13 60.1 706.83 HUMAN 1 5.7716 9.3607 KLDNGGYYITTRAQF-p J3QRU1;Y228-p KLDNGGYYITTRAQF 0.164630382511998 0.284542382022951 0.263333333333333 0.107666666666667 15.6878370624516 7.19816811510065 0.263333333333333 0.107666666666667 0.0269908333512513 0.190626462433121 3.00847860093366 1.49523396527383 J3QRU1 NotFound J3QRU1.Y228.p_NotFound J3QRU1_Y228y _1_1_228_228 J3QRU1 J3QRU1|P07947|P06241|P06241-2|P06241-3 Tyrosine-protein kinase GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11218.11218.3 14.22 14.22 1.653 4 1 1 0 570.6198 1629.8798 Y228y Hydrogen 221 (R) KLDNGGYyITTR (A) KLDNGGY(0.0)Y(0.99)IT(0.0)T(0.0)R K:TMT10-Lys-Only,y:Phosphorylated Y YES1 61899.4 2 3 4.1 124.38 HUMAN 1 15.6878 7.1982 KLDNTPASPPRSPAE-p O95359;S2317-p KLDNTPASPPRSPAE 0.898522472312718 0.00535648747248553 0.0286666666666667 0.561333333333333 0.909252878848078 32.9832404479688 0.0286666666666667 0.561333333333334 0.811100580298529 0.000503125066602848 0.250957961878588 7.38044184618024 O95359 TACC2 O95359.S2317.p_TACC2 O95359_S2317s _1_1_2317_2317 O95359 O95359|E9PBC6|O95359-3|E7EMZ9 Transforming acidic coiled-coil-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18080.18116.4 20.26 20.26 1.719 4 1 1 0 881.475 3442.9149 S2317s TMT10 2307 (K) TPEKLDNTPAsPPRSPAEPNDIPIAK (G) T(0.0)PEKLDNT(0.0)PAS(0.99)PPRS(0.0)PAEPNDIPIAK K:TMT10,s:Phosphorylated S TACC2 311818.1 6 17 101.1 597.93 HUMAN 1 0.9093 32.9832 KLDQLDGSFDDPNTV-p Q9UJC3;S235-p KLDQLDGSFDDPNTV 0.318306211960517 0.0184174230513839 -0.146333333333333 -0.474 9.30903395815274 23.8739664928167 -0.146333333333333 -0.474 0.11724561369318 0.00409829626933079 -1.86187235916876 -4.75853116042973 Q9UJC3 HOOK1 Q9UJC3.S235.p_HOOK1 Q9UJC3_S235s _1_1_235_235 Q9UJC3 Q9UJC3|Q9UJC3-2 Protein Hook homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27768.27790.4 18.75 18.75 2.581 4 1 1 0 1027.4982 4027.0243 S235s TMT10 216 (K) NSLVSENEMMNEKLDQLDGsFDDPNTVVAK (K) NS(0.0)LVS(0.0)ENEMMNEKLDQLDGS(0.99)FDDPNT(0.0)VVAK K:TMT10,s:Phosphorylated S HOOK1 85274 8 2 1245.1 162.36 HUMAN 1 -9.309 -23.874 KLDSPSRSPSKVEVT-p O14523;S468-p KLDSPSRSPSKVEVT 0.104209357384164 0.00196147859442423 -0.460666666666667 -0.855333333333333 20.7092159716996 42.3384608256999 -0.460666666666667 -0.855333333333333 0.00849333790736253 5.83651918520673e-05 -4.0328360850722 -11.234865468705 O14523 C2CD2L O14523.S468.p_C2CD2L O14523_S468s _1_1_468_468 O14523 O14523-2|E9PK05 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11642.11642.4 16.95 9.53 1.142 5 1 1 0 632.3502 2446.412 S468s TMT10 462 (K) LDSPSRsPSKVEVTEK (T) LDS(0.0)PS(0.0)RS(0.99)PS(0.0)KVEVT(0.0)EK K:TMT10,s:Phosphorylated S C2CD2L 76636.4 5 11 411.1 322.51 HUMAN 1 -20.7092 -42.3385 KLDVTILSPSRKVVP-p O75369-8;S983-p KLDVTILSPSRKVVP 0.821669140364616 0.126794793133495 -0.039 -0.229666666666667 1.64151881156477 11.8229054606544 -0.039 -0.229666666666667 0.685248539912934 0.0657218006774181 -0.427864309558791 -2.29983416660889 O75369 FLNB O75369.8.S983.p_FLNB O75369-8_S983s _1_1_983_983 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|O75369-4|O75369-5 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16814.16814.3 14.01 9.78 2.367 3 1 1 0 851.1585 2471.4913 S983s TMT10 970 (R) GAGGQGKLDVTILsPSRK (V) GAGGQGKLDVT(0.0)ILS(0.99)PS(0.0)RK K:TMT10,s:Phosphorylated S FLNB 283797.6 10 17 67.1 680.07 HUMAN 1 -1.6415 -11.8229 KLEDEDDSDSELDLS-p Q9HCK8;S2069-p KLEDEDDSDSELDLS 0.972940601914744 0.711996201293195 -0.00566666666666668 -0.0366666666666666 0.232913267637943 2.0294764914896 -0.00566666666666668 -0.0366666666666666 0.947782473109204 0.626689402694705 -0.0685857707816505 -0.515259820367532 Q9HCK8 CHD8 Q9HCK8.S2069.p_CHD8 Q9HCK8_S2069s _1_1_2069_2069 Q9HCK8 Q9HCK8|Q9HCK8-2 Chromodomain-helicase-DNA-binding protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21702.21702.3 9.8 9.8 1.263 4 1 1 0 1028.8452 3004.5817 S2069s TMT10 2057 (R) SVPPVKLEDEDDsDSELDLSK (L) S(0.0)VPPVKLEDEDDS(0.99)DS(0.0)ELDLS(0.0)K K:TMT10,s:Phosphorylated S CHD8 292339.6 1 8 419.1 320.67 HUMAN 1 -0.2329 -2.0295 KLEDVKNSPTFKSFE-p P55327;S171-p KLEDVKNSPTFKSFE 0.247048592039774 0.00298089814036961 -0.187333333333333 -0.706 11.6083873858489 37.9927618548348 -0.187333333333333 -0.706 0.0690496149983847 0.000158753684841393 -2.26305975150074 -9.26417455640046 P55327 TPD52 P55327.S171.p_TPD52 P55327_S171s _1_1_171_171 P55327 H0YC42|P55327-3|P55327-2 Tumor protein D52 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14489.14489.4 9.03 7.04 1.14 2 1 1 0 601.354 2322.4203 S171s TMT10 164 (K) KLEDVKNsPTFK (S) KLEDVKNS(0.99)PT(0.0)FK K:TMT10,s:Phosphorylated S TPD52 24383.6 6 5 1260.1 161.11 HUMAN 1 -11.6084 -37.9928 KLEEKQKSDAEEDGG-p P27824-2;S589-p KLEEKQKSDAEEDGG 0.33912754449531 0.0772645698528299 -0.271333333333333 0.461666666666667 8.736185126653 14.7538802272261 -0.271333333333333 0.461666666666667 0.13377701072801 0.033466629615392 -1.76269620605239 2.83060737041794 P27824 CANX P27824.2.S589.p_CANX P27824-2_S589s_1_1_589_589 P27824-2 P27824-2|P27824-3 Isoform 2 of Calnexin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13211.13211.5 27.02 27.02 16.346 3 1 1 0 857.2188 4219.1205 Q587q S589s Hydrogen 587 (K) qKsDAEEDGGTVSQEEEDRKPKAEEDEILNR (S) Q(1.0)KS(0.99)DAEEDGGT(0.0)VS(0.0)QEEEDRKPKAEEDEILNR K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S CANX 72015 20 2 806.1 222 HUMAN 1 -8.7362 14.7539 KLEKECQSSEESMGS-p A0A0D9SGJ8;S375-p KLEKECQSSEESMGS 0.60815172428745 0.261823729556559 -0.118666666666667 0.119333333333333 3.99994035154929 7.66605799927062 -0.118666666666667 0.119333333333333 0.398112638419198 0.171156816508154 -0.917118210038268 1.57669327263894 A0A0D9SGJ8 NotFound A0A0D9SGJ8.S375.p_NotFound A0A0D9SGJ8_S375s _1_1_375_375 A0A0D9SGJ8 A0A0D9SGJ8|Q2TAK8-3|J3KNX4|Q2TAK8-2 PWWP domain-containing protein MUM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6763.6763.2 12.78 11.12 1.13 5 1 1 0 1014.3913 1947.8044 S375s TMT10 372 (K) ECQsSEESMGSNSMR (S) ECQS(0.99)S(0.0)EES(0.0)MGS(0.0)NS(0.0)MR C:Carbamidomethylation,s:Phosphorylated S MUM1 82198.8 1 3 2892.1 66.68 HUMAN 1 -3.9999 7.6661 KLEKVPDSPENELKS-p Q8NI35;S522-p KLEKVPDSPENELKS 0.178441218280072 0.0209571195470645 -0.263333333333333 -0.357666666666667 14.7803216140924 22.9590803164051 -0.263333333333333 -0.357666666666667 0.0332634919308678 0.00505931789291811 -2.83735095348623 -4.5396879828298 Q8NI35 INADL Q8NI35.S522.p_INADL Q8NI35_S522s _1_1_522_522 Q8NI35 Q8NI35|Q8NI35-2|Q8NI35-3|Q8NI35-4|A0A087WUZ6|A0A0X1KG69 InaD-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17405.17405.3 17.49 17.49 99 1 1 1 0 755.7499 2185.2683 S522s TMT10 516 (K) LEKVPDsPENELK (S) LEKVPDS(1.0)PENELK K:TMT10,s:Phosphorylated S PATJ 197163.3 8 8 127.1 542.92 HUMAN 1 -14.7803 -22.9591 KLENARLSSEMNTST-p P20700;S278-p KLENARLSSEMNTST 0.795239329601894 0.865636973668697 -0.058 0.03 1.92266529413282 0.883125193040816 -0.058 0.03 0.642293416593407 0.815994968187176 -0.49160677833604 0.24427538424282 P20700 LMNB1 P20700.S278.p_LMNB1 P20700_S278s _1_1_278_278 P20700 P20700|E9PBF6|A0A0D9SFE5 Lamin-B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13636.13636.3 14.14 14.14 1.117 6 1 1 0 797.0505 2309.1717 S278s TMT10 272 (K) LENARLsSEMNTSTVNSAR (E) LENARLS(0.99)S(0.0)EMNT(0.0)S(0.0)T(0.0)VNS(0.0)AR s:Phosphorylated S LMNB1 66692.5 3 6 440.1 312.01 HUMAN 1 -1.9227 0.8831 KLEPKEESPTRINGS-p Q8N6T7;S303-p KLEPKEESPTRINGS 0.662515509657473 0.457884444815798 -0.121666666666667 0.133333333333333 3.34874413551017 4.52315375687924 -0.121666666666667 0.133333333333333 0.462514749065076 0.352926788565209 -0.790398175932582 1.01571126286203 Q8N6T7 SIRT6 Q8N6T7.S303.p_SIRT6 Q8N6T7_S303s _1_1_303_303 Q8N6T7 Q8N6T7|Q8N6T7-2 NAD-dependent protein deacetylase sirtuin-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15550.15550.4 12.28 5.16 1.498 3 1 1 0 722.6537 2807.6234 S303s TMT10 297 (K) LEPKEEsPTRINGSIPAGPK (Q) LEPKEES(0.99)PT(0.0)RINGS(0.0)IPAGPK K:TMT10,s:Phosphorylated S SIRT6 39460.5 4 3 1763.1 116.79 HUMAN 1 -3.3487 4.5232 KLEPQELSPLSATVF-p Q9H869-9;S803-p KLEPQELSPLSATVF 0.810235170894453 0.224222747944548 -0.072 -0.197333333333333 1.75469767926353 8.55153464509031 -0.072 -0.197333333333333 0.667621373753826 0.139587502039306 -0.453765730777623 -1.7301409816227 Q9H869 YY1AP1 Q9H869.9.S803.p_YY1AP1 Q9H869-9_S803sS816s_2_2_803_816 Q9H869-9 Q9H869-9|Q9H869-8 Isoform 9 of YY1-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28795.28795.5 17.44 17.44 1.689 4 2 2 0 769.4062 3683.0663 S803s S816s TMT10 797 (K) LEPQELsPLSATVFPKVEHsPGPPPVDK (Q) LEPQELS(0.99)PLS(0.0)AT(0.0)VFPKVEHS(0.99)PGPPPVDK K:TMT10,s:Phosphorylated S YY1AP1 98798 1 27 291.2 381.52 HUMAN 1 -1.7547 -8.5515 KLEPQIASASEYAHR-p O60664;S91-p KLEPQIASASEYAHR 0.236860010933749 0.372696321330621 0.190333333333333 -0.0856666666666667 11.9844216924553 5.6863171329173 0.190333333333333 -0.0856666666666667 0.0633224676442565 0.270002811674371 2.32957173042718 -1.22819743001852 O60664 PLIN3 O60664.S91.p_PLIN3 O60664_S91s _1_1_91_91 O60664 O60664|O60664-3|O60664-4 Perilipin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14393.14393.3 14.42 14.42 2.43 3 1 1 0 627.6419 1800.9442 S91s TMT10 85 (K) LEPQIAsASEYAHR (G) LEPQIAS(0.99)AS(0.0)EY(0.0)AHR s:Phosphorylated S PLIN3 47245.3 2 2 1075.1 180.54 HUMAN 1 11.9844 -5.6863 KLEQKTKSGLTGYIK-p Q9UHB9;S613-p KLEQKTKSGLTGYIK 0.27384188594431 0.0680782686064793 -0.157333333333333 -0.227666666666667 10.6528556793738 15.5253090375099 -0.157333333333333 -0.227666666666667 0.0860427796590166 0.0280200622796654 -2.09539795600725 -2.97554059319129 Q9UHB9 SRP68 Q9UHB9.S613.p_SRP68 Q9UHB9_S613s _1_1_613_613 Q9UHB9 Q9UHB9|Q9UHB9-2|Q9UHB9-4|Q9UHB9-3 Signal recognition particle subunit SRP68 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17125.17125.3 13.32 13.32 1.357 4 1 1 0 612.3611 1755.0983 S613s TMT10 611 (K) TKsGLTGYIK (G) T(0.0)KS(0.99)GLT(0.0)GY(0.0)IK K:TMT10,s:Phosphorylated S SRP68 71241.8 1 4 2177.1 94.49 HUMAN 1 -10.6529 -15.5253 KLERPPETPTVDPTV-p F5GWX5;T696-p KLERPPETPTVDPTV 0.369489108717469 0.00455061128120994 0.127666666666667 0.931 8.02153880603579 34.3396324101136 0.127666666666667 0.931 0.157705238447016 0.000368160133654969 1.6388968248561 7.85424600080244 F5GWX5 CHD4 F5GWX5.T696.p_CHD4 F5GWX5_T696t _1_1_696_696 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10601.10601.5 10.84 10.84 1.119 4 1 1 0 559.5052 2713.5289 T696t Hydrogen 689 (R) KLERPPEtPTVDPTVKYER (Q) KLERPPET(0.99)PT(0.0)VDPT(0.0)VKY(0.0)ER K:TMT10-Lys-Only,t:Phosphorylated T CHD4 218583 3 12 49.1 753.68 HUMAN 1 8.0215 34.3396 KLESESTSPSLEMKI-p Q5VT52;S665-p KLESESTSPSLEMKI 0.18709748510332 0.0495585182982508 -0.324666666666667 0.246666666666667 14.3029464298021 17.4535856725915 -0.324666666666667 0.246666666666667 0.0371283250024023 0.0179738632335791 -2.74871158291094 3.34987515645905 Q5VT52 RPRD2 Q5VT52.S665.p_RPRD2 Q5VT52_S665s_1_1_665_665 Q5VT52 Q5VT52|Q5VT52-3|Q5VT52-2|Q5VT52-5 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14427.14427.2 9.81 9.81 1.149 5 1 1 0 996.489 1896.0036 S665s M670m TMT10 659 (K) LESESTsPSLEmK (I) LES(0.0)ES(0.0)T(0.0)S(0.99)PS(0.0)LEM(1.0)K K:TMT10,s:Phosphorylated S,m:Oxidized methionine RPRD2 156473.2 5 13 172.1 488.65 HUMAN 1 -14.3029 17.4536 KLFAKQRSRDAVETN-p A0A0A0MTH9;S224-p KLFAKQRSRDAVETN 0.336575596768937 0.265955571229307 -0.183666666666667 0.116666666666667 8.81405559834685 7.57323029525341 -0.183666666666667 0.116666666666667 0.131399720114909 0.174854563138633 -1.7761755898893 1.56055995748862 A0A0A0MTH9 NotFound A0A0A0MTH9.S224.p_NotFound A0A0A0MTH9_S224s _1_1_224_224 A0A0A0MTH9 O14981|A0A0A0MTH9 TATA-binding protein-associated factor 172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3995.3995.3 10.39 8.53 7.743 2 1 1 0 486.5666 1377.7171 S224s Hydrogen 224 (R) sRDAVETNEK (S) S(0.99)RDAVET(0.0)NEK K:TMT10-Lys-Only,s:Phosphorylated S BTAF1 209212 3 3 2247.1 91.7 HUMAN 1 -8.8141 7.5732 KLFDAPLSISKREQL-p Q6VEQ5;S217-p KLFDAPLSISKREQL 0.0741090610494485 0.251693388477614 -0.544333333333333 0.116333333333333 24.2438134849712 7.89014661811969 -0.544333333333333 0.116333333333333 0.00376373165321646 0.162549387803757 -4.85477238352755 1.61559335566739 Q6VEQ5 NotFound Q6VEQ5.S217.p_NotFound Q6VEQ5_S217s _1_1_217_217 Q6VEQ5 A8MWX3|Q6VEQ5|A8K0Z3 WAS protein family homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23343.23343.3 13.42 7.39 2.536 2 1 1 0 595.6739 1705.0413 S217s TMT10 211 (K) LFDAPLsISKR (E) LFDAPLS(0.99)IS(0.0)KR K:TMT10,s:Phosphorylated S WASH2P 50368.1 2 1 3154.1 59.1 HUMAN 1 -24.2438 7.8901 KLFDVCGSQDFESDL-p Q92878-2;S641-p KLFDVCGSQDFESDL 0.41209446543283 0.00417056517443167 -0.155666666666667 0.789 7.10320882596448 35.0238259166589 -0.155666666666667 0.789 0.194840447067681 0.000314497652672612 -1.47906755534081 8.10298881299363 Q92878 RAD50 Q92878.2.S641.p_RAD50 Q92878-2_S641s _1_1_641_641 Q92878-2 Q92878-2|Q92878-3 Isoform 2 of DNA repair protein RAD50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36078.36078.5 20.32 20.32 7.635 2 1 1 0 708.7546 3459.7921 S641s TMT10 635 (K) LFDVCGsQDFESDLDRLKEEIEK (S) LFDVCGS(0.99)QDFES(0.0)DLDRLKEEIEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RAD50 155611.3 15 4 1263.1 160.86 HUMAN 1 -7.1032 35.0238 KLFEDDDSNEKLFDE-p O43719;S702-p KLFEDDDSNEKLFDE 0.193912007872684 0.00119729192543449 -0.960666666666667 1.23166666666667 13.904101341134 48.1041011242909 -0.960666666666667 1.23166666666667 0.0406995742222794 1.54735473266661e-05 -2.67532817084937 14.4542536221175 O43719 HTATSF1 O43719.S702.p_HTATSF1 O43719_S702s _1_1_702_702 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23569.23569.3 21.78 21.78 7.861 3 1 1 0 1096.4991 3207.5308 S702s TMT10 696 (K) LFEDDDsNEKLFDEEEDSSEK (L) LFEDDDS(0.99)NEKLFDEEEDS(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S HTATSF1 86421.8 6 15 149.1 512 HUMAN 1 -13.9041 48.1041 KLFIGGLSFETTDES-p P09651-2;S22-p KLFIGGLSFETTDES 0.791634956034985 0.424250767281389 -0.052 0.115666666666667 1.95999645926937 4.95722511641952 -0.052 0.115666666666667 0.636796040076917 0.319357770967821 -0.499924631384991 1.09599360151084 P09651 HNRNPA1 P09651.2.S22.p_HNRNPA1 P09651-2_S22s _1_1_22_22 P09651-2 P09651|P09651-2|Q32P51 Isoform A1-A of Heterogeneous nuclear ribonucleoprotein A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33852.33852.3 15.42 15.42 2.681 4 1 1 0 698.683 2014.0694 S22s TMT10 16 (K) LFIGGLsFETTDESLR (S) LFIGGLS(0.99)FET(0.0)T(0.0)DES(0.0)LR s:Phosphorylated S HNRNPA1 34309.7 2 4 504.1 289.99 HUMAN 1 -1.96 4.9572 KLFIGGLSFETTEES-p P22626;S29-p KLFIGGLSFETTEES 0.902795808622011 0.388580626972093 -0.022 0.127 0.871624462940886 5.45741884930284 -0.022 0.127 0.818158701563698 0.28461521639306 -0.241359354110087 1.18700242957654 P22626 HNRNPA2B1 P22626.S29.p_HNRNPA2B1 P22626_S29s _1_1_29_29 P22626 P22626|P22626-2|A0A087WUI2 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.33989.33989.2 11.17 4.81 1.153 4 1 1 0 1054.5293 2028.0851 S29s TMT10 23 (K) LFIGGLsFETTEESLR (N) LFIGGLS(0.99)FET(0.0)T(0.0)EES(0.0)LR s:Phosphorylated S HNRNPA2B1 37486.1 3 1 299.1 378.08 HUMAN 1 -0.8716 5.4574 KLFIIRGSPQQIDHA-p A0A087WTP3;S480-p KLFIIRGSPQQIDHA 0.373450411101899 0.00827523544649006 0.120666666666667 0.440333333333333 7.92610729811195 29.618960760545 0.121071678546307 0.440333333333333 0.161208994872299 0.00109170154252668 1.62233953116257 6.30719356810509 A0A087WTP3 NotFound A0A087WTP3.S480.p_NotFound A0A087WTP3_S480s _1_1_480_480 A0A087WTP3 Q92945|A0A087WTP3 Far upstream element-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19611.19818.4 18.66 16.3 99 1 1 1 0 566.0697 2181.2908 S480s TMT10 474 (K) LFIIRGsPQQIDHAK (Q) LFIIRGS(1.0)PQQIDHAK K:TMT10,s:Phosphorylated S KHSRP 73482.9 6 9 970.1 193.49 HUMAN 1 7.9261 29.619 KLFTIRGTPQQIDYA-p Q96AE4;T432-p KLFTIRGTPQQIDYA 0.150283451076775 0.0614114316176257 0.382333333333333 0.314666666666667 16.5877563122689 16.1353031046504 0.382333333333333 0.314666666666667 0.0219393809288561 0.0243483586092272 3.1818750698964 3.09200544147783 Q96AE4 FUBP1 Q96AE4.T432.p_FUBP1 Q96AE4_T432t _1_1_432_432 Q96AE4 E9PEB5|Q96AE4-2 Far upstream element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20712.20712.3 15.18 7.76 4.266 3 1 1 0 696.7009 2008.1177 T432t TMT10 426 (K) LFTIRGtPQQIDYAR (Q) LFT(0.0)IRGT(0.99)PQQIDY(0.0)AR t:Phosphorylated T FUBP1 67730.3 1 7 1157.1 171.64 HUMAN 1 16.5878 16.1353 KLFTRCLTPLVPEDL-p O60216;T394-p KLFTRCLTPLVPEDL 0.638642908012215 0.00360332108061802 0.0666666666666667 0.733 3.63290932727942 36.3700686185905 0.0666666666666667 0.733 0.433220567843505 0.00023067107423693 0.846275562300724 8.61252798764712 O60216 RAD21 O60216.T394.p_RAD21 O60216_T394t _1_1_394_394 O60216 O60216 Double-strand-break repair protein rad21 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22823.22823.3 13.05 13.05 99 1 1 1 0 660.3645 1899.1138 T394t TMT10 392 (R) CLtPLVPEDLRK (R) CLT(1.0)PLVPEDLRK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T RAD21 71973.5 2 4 1167.1 170.49 HUMAN 1 3.6329 36.3701 KLGAVGGSGFKVCLR-p O95163;S471-p KLGAVGGSGFKVCLR 0.122554525096102 0.0444539202864225 -0.284333333333333 -0.339666666666667 18.9783379965809 18.0994608813781 -0.284333333333333 -0.339666666666667 0.0126522044259083 0.015490088957534 -3.66304007687 -3.47955378755132 O95163 IKBKAP O95163.S471.p_IKBKAP O95163_S471s _1_1_471_471 O95163 O95163|F5H2T0 Elongator complex protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18907.18907.2 11.78 11.78 99 1 1 1 0 715.8942 1350.8146 S471s TMT10 465 (K) LGAVGGsGFK (V) LGAVGGS(1.0)GFK K:TMT10,s:Phosphorylated S ELP1 151906.1 2 2 1710.1 120.03 HUMAN 1 -18.9783 -18.0995 KLGDFGCSVKLKNNA-p Q9Y6R4;S1485-p KLGDFGCSVKLKNNA 0.965959546905574 0.193376281148046 0.007 0.163 0.290842463221711 9.3814692058903 0.007 0.163 0.935224237707199 0.115306311385792 0.0851231922622192 1.87371432171458 Q9Y6R4 MAP3K4 Q9Y6R4.S1485.p_MAP3K4 Q9Y6R4_S1485s _1_1_1485_1485 Q9Y6R4 Q9Y6R4|F5H538|Q9Y6R4-2 Mitogen-activated protein kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19461.19461.2 7.87 7.87 99 1 1 1 0 760.8852 1440.7921 S1485s TMT10 1479 (K) LGDFGCsVK (L) LGDFGCS(1.0)VK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP3K4 183393.1 1 8 1091.1 179.07 HUMAN 1 0.2908 9.3815 KLGDFGLSRYMEDST-p E7ESA6;S612-p KLGDFGLSRYMEDST 0.755470609501715 0.0332666986005803 -0.0563333333333333 0.383 2.32835775049156 19.9263188952298 -0.0563333333333333 0.383 0.585011259607089 0.0101711043620999 -0.580350955071216 3.85956084761017 E7ESA6 NotFound E7ESA6.S612.p_NotFound E7ESA6_S612s _1_1_612_612 E7ESA6 E7ESA6|Q05397-5|Q05397-7|Q05397-2|E9PEI4|Q05397-3|Q05397-4 Focal adhesion kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30467.30467.3 17.61 12.59 4.945 6 1 1 0 861.7467 2503.2579 S612s TMT10 606 (K) LGDFGLsRYMEDSTYYK (A) LGDFGLS(0.99)RY(0.0)MEDS(0.0)T(0.0)Y(0.0)Y(0.0)K K:TMT10,s:Phosphorylated S PTK2 124992.4 3 3 979.1 192.68 HUMAN 1 -2.3284 19.9263 KLGDLQRSWETLKNV-p Q8NF91;S5943-p KLGDLQRSWETLKNV 0.707209535354653 0.456691165162714 0.0536666666666667 0.0716666666666667 2.82876136044585 4.53917884147713 0.0536666666666667 0.0716666666666666 0.52134338083984 0.351626919417178 0.685411892858722 1.01869962770008 Q8NF91 SYNE1 Q8NF91.S5943.p_SYNE1 Q8NF91_S5943s _1_1_5943_5943 Q8NF91 Q8NF91 Nesprin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22406.22406.3 14.59 14.59 3.335 2 1 1 0 662.0283 1904.1006 S5943s TMT10 5937 (K) LGDLQRsWETLK (N) LGDLQRS(0.99)WET(0.0)LK K:TMT10,s:Phosphorylated S SYNE1 1017743.3 1 4 1772.1 116.1 HUMAN 1 2.8288 4.5392 KLGDMRNSATFKSFE-p O43399-2;S141-p KLGDMRNSATFKSFE 0.824283520934974 0.0182244938667557 -0.034 -0.509 1.618198394465 23.9422720532316 -0.034 -0.509 0.688938032685581 0.00403434277237677 -0.422484951787669 -4.77514516884956 O43399 TPD52L2 O43399.2.S141.p_TPD52L2 O43399-2_S141s _1_1_141_141 O43399-2 O43399|O43399-2|O43399-6 Isoform 2 of Tumor protein D54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12794.12794.3 12.61 7.24 2.174 2 1 1 0 712.393 2055.1988 S141s TMT10 134 (R) KLGDMRNsATFK (S) KLGDMRNS(0.99)AT(0.0)FK K:TMT10,s:Phosphorylated S TPD52L2 19957.8 9 15 793.1 224.4 HUMAN 1 -1.6182 -23.9423 KLGIHEDSQNRKKLS-p P07900;S453-p KLGIHEDSQNRKKLS 0.898896426785364 0.38412685509375 -0.0243333333333333 0.0976666666666667 0.904744614302482 5.52256198682559 -0.0243333333333334 0.0976666666666667 0.811942993620375 0.280377914665167 -0.249810927675339 1.19875279966298 P07900 HSP90AA1 P07900.S453.p_HSP90AA1 P07900_S453s _1_1_453_453 P07900 P07900-2 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6836.6836.3 16.33 16.33 99 1 1 1 0 612.3241 1754.9914 S453s TMT10 447 (K) LGIHEDsQNRK (K) LGIHEDS(1.0)QNRK K:TMT10,s:Phosphorylated S HSP90AA1 85057.6 7 13 43.1 810.87 HUMAN 1 -0.9047 5.5226 KLGIHEDSTNRRRLS-p P08238;S445-p KLGIHEDSTNRRRLS 0.982084938755332 0.756036718889476 0.00433333333333334 -0.0303333333333333 0.156183519484163 1.6796289278472 0.00433333333333335 -0.0303333333333333 0.964676386779217 0.679261667966963 0.0463728786912627 -0.436575819969752 P08238 HSP90AB1 P08238.S445.p_HSP90AB1 P08238_S445s _1_1_445_445 P08238 P08238 Heat shock protein HSP 90-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7092.7092.2 14.18 14.18 1.191 2 1 1 0 725.8472 1370.7226 S445s TMT10 439 (K) LGIHEDsTNR (R) LGIHEDS(0.99)T(0.0)NR s:Phosphorylated S HSP90AB1 83605 5 33 43.2 810.87 HUMAN 1 0.1562 -1.6796 KLGLPPLTPEQQEAL-p Q9UHX1;T60-p KLGLPPLTPEQQEAL 0.578214566607126 0.0208215406538632 -0.114333333333333 -0.337 4.37543569054854 22.9976935382017 -0.114333333333333 -0.337 0.365137494292183 0.00501453476066029 -0.988247984414678 -4.54878825420164 Q9UHX1 PUF60 Q9UHX1.T60.p_PUF60 Q9UHX1_T60t _1_1_60_60 Q9UHX1 Q9UHX1|Q9UHX1-2 Poly(U)-binding-splicing factor PUF60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26611.26611.3 15.05 15.05 99 1 1 1 0 767.4264 2220.3004 T60t TMT10 54 (K) LGLPPLtPEQQEALQK (A) LGLPPLT(1.0)PEQQEALQK K:TMT10,t:Phosphorylated T PUF60 60045.6 3 1 1450.1 140.84 HUMAN 1 -4.3754 -22.9977 KLGLRQVTGVTRVTI-p E9PAV3;T1952-p KLGLRQVTGVTRVTI 0.201694340984261 0.563392974355581 -0.203 -0.0636666666666667 13.5035341042092 3.35831580101464 -0.203 -0.0636666666666667 0.044632024785497 0.46149650873846 -2.6022093068505 -0.792177231662786 E9PAV3 NACA E9PAV3.T1952.p_NACA E9PAV3_T1952t _1_1_1952_1952 E9PAV3 E9PAV3|E9PAV3-2|Q13765|F8VZJ2 Nascent polypeptide-associated complex subunit alpha, muscle-specific form HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5695.5695.2 9.02 2.38 2.712 2 1 1 0 535.2839 989.5941 T1952t TMT10 1950 (R) QVtGVTR (V) QVT(0.99)GVT(0.0)R t:Phosphorylated T NACA 206102.3 1 12 533.1 279.72 HUMAN 1 -13.5035 -3.3583 KLGNSGASPSSAGK_-p Q8IWI9-4;S3059-p KLGNSGASPSSAGK_ 0.929515219349453 0.796046315278255 0.015 -0.0263333333333333 0.629715735368922 1.38283701108504 0.015 -0.0263333333333333 0.865024536541679 0.727304540580915 0.178230507228505 -0.367293426634618 Q8IWI9 MGA Q8IWI9.4.S3059.p_MGA Q8IWI9-4_S3059s _1_1_3059_3059 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9700.9700.2 16.84 9.53 1.487 4 1 1 0 835.9289 1590.8852 S3059s TMT10 3053 (K) LGNSGAsPSSAGK (-) LGNS(0.0)GAS(0.99)PS(0.0)S(0.0)AGK K:TMT10,s:Phosphorylated S MGA 338321.5 4 25 141.1 523.06 HUMAN 1 0.6297 -1.3828 KLGPRSLSCLSDLDG-p O95685;S25-p KLGPRSLSCLSDLDG 0.320834686150934 0.983787641546777 0.198 -0.0023333333333333 9.24387253120718 0.103641612330859 0.198 -0.0023333333333333 0.119018027090362 0.976418139050692 1.85058691182533 -0.0309481820671078 O95685 PPP1R3D O95685.S25.p_PPP1R3D O95685_S25s _1_1_25_25 O95685 O95685 Protein phosphatase 1 regulatory subunit 3D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27959.27959.2 16.12 11.41 2.187 3 1 1 0 1049.5072 2018.0426 S25s TMT10 23 (R) SLsCLSDLDGGVALEPR (A) S(0.0)LS(0.99)CLS(0.0)DLDGGVALEPR C:Carbamidomethylation,s:Phosphorylated S PPP1R3D 33300.2 6 1 2020.1 102.1 HUMAN 1 9.2439 -0.1036 KLGQRPLSQPAGIST-p O95081;S451-p KLGQRPLSQPAGIST 0.900729474872813 0.332973784281171 -0.0186666666666667 0.104333333333333 0.889536310972826 6.32964675098906 -0.0186666666666667 0.104333333333333 0.814791273292005 0.232828062902835 -0.245935534468079 1.34274584463126 O95081 AGFG2 O95081.S451.p_AGFG2 O95081_S451s _1_1_451_451 O95081 O95081 Arf-GAP domain and FG repeat-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.33111.33111.4 13.5 11.22 1.145 10 1 1 0 1092.3146 4286.2684 S451s TMT10 445 (K) LGQRPLsQPAGISTNPFMTGPSSSPFASKPPTTNPFL (-) LGQRPLS(0.99)QPAGIS(0.0)T(0.0)NPFMT(0.0)GPS(0.0)S(0.0)S(0.0)PFAS(0.0)KPPT(0.0)T(0.0)NPFL K:TMT10,s:Phosphorylated S AGFG2 49361.5 2 2 4579.1 29.47 HUMAN 1 -0.8895 6.3296 KLGQSVTTIPTVGFN-p P62330;T41-p KLGQSVTTIPTVGFN 0.687121855784496 0.151532310496799 -0.0546666666666667 0.226666666666667 3.05936041849026 10.7755593899926 -0.0546666666666667 0.226666666666667 0.494383489030032 0.0836457849444231 -0.732443493022783 2.11590247441821 P62330 ARF6 P62330.T41.p_ARF6 P62330_T41t _1_1_41_41 P62330 P62330 ADP-ribosylation factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30757.30757.3 16.97 16.97 1.108 7 1 1 0 931.5044 2712.5224 T41t TMT10 35 (K) LGQSVTtIPTVGFNVETVTYK (N) LGQS(0.0)VT(0.0)T(0.99)IPT(0.0)VGFNVET(0.0)VT(0.0)Y(0.0)K K:TMT10,t:Phosphorylated T ARF6 20195.9 3 1 4753.1 27.02 HUMAN 1 -3.0594 10.7756 KLGTLNGSQEEMWQK-p Q8N4C6-7;S1550-p KLGTLNGSQEEMWQK 0.416668444361649 0.092214868216397 -0.115333333333333 0.188666666666667 7.01738900014411 13.6930393688572 -0.115333333333333 0.188666666666667 0.19872893264286 0.0427263764990256 -1.46405672278025 2.6351919259088 Q8N4C6 NIN Q8N4C6.7.S1550.p_NIN Q8N4C6-7_S1550s_1_1_1550_1550 Q8N4C6-7 Q8N4C6-7|Q8N4C6-10|Q8N4C6-5|Q8N4C6-2|Q8N4C6-9|C9J066|Q8N4C6-4|E9PN67 Isoform 7 of Ninein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20106.20106.3 16.29 10.62 5.326 2 1 1 0 725.6902 2079.0945 S1550s M1554m TMT10 1544 (K) LGTLNGsQEEmWQK (T) LGT(0.0)LNGS(0.99)QEEM(1.0)WQK K:TMT10,s:Phosphorylated S,m:Oxidized methionine NIN 250243.4 4 5 2284.1 89.71 HUMAN 1 -7.0174 13.693 KLGYTRDSPGFLRFV-p A0A087X2H1;S2521-p KLGYTRDSPGFLRFV 0.698853520920314 0.0452664289258507 -0.055 -0.255666666666667 2.9244845580049 17.9882289204674 -0.055 -0.255666666666667 0.50997812068823 0.0158919469981471 -0.705032078210728 -3.45705557812721 A0A087X2H1 NotFound A0A087X2H1.S2521.p_NotFound A0A087X2H1_S2521s _1_1_2521_2521 A0A087X2H1 A0A087X2H1 E3 ubiquitin-protein ligase HECTD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17056.17056.3 10.84 6.54 2.519 3 1 1 0 564.2899 1610.8852 S2521s TMT10 2515 (K) LGYTRDsPGFLR (F) LGY(0.0)T(0.0)RDS(0.99)PGFLR s:Phosphorylated S HECTD1 292594.4 1 20 365.1 342.23 HUMAN 1 -2.9245 -17.9882 KLHDSSGSQVGTGFK-p P49792;S1835-p KLHDSSGSQVGTGFK 0.285207992770294 0.104732599517753 0.187 -0.25 10.2829106108141 12.9477546147509 0.187 -0.25 0.0936933870028735 0.0507252899907449 2.03090741760259 -2.50029160828838 P49792 RANBP2 P49792.S1835.p_RANBP2 P49792_S1835s _1_1_1835_1835 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12330.12330.3 15.44 15.44 3.26 4 1 1 0 653.3303 1878.0121 S1835s TMT10 1829 (K) LHDSSGsQVGTGFK (S) LHDS(0.0)S(0.0)GS(0.99)QVGT(0.0)GFK K:TMT10,s:Phosphorylated S RANBP2 362585.9 1 35 9.1 1298.62 HUMAN 1 10.2829 -12.9478 KLHFLAPSEEDEMND-p Q8N543;S371-p KLHFLAPSEEDEMND 0.153811795437004 0.00992428592126084 -0.245333333333333 -0.664666666666667 16.3377402472487 28.1665712184722 -0.245333333333333 -0.664666666666667 0.0232394569420673 0.00152525647788989 -3.1333115102113 -5.88453623081443 Q8N543 OGFOD1 Q8N543.S371.p_OGFOD1 Q8N543_S371s _1_1_371_371 Q8N543 Q8N543|A0A0A0MTR2|Q8N543-2 Prolyl 3-hydroxylase OGFOD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19125.19125.4 8.35 8.35 99 1 1 1 0 668.3427 2590.379 S371s TMT10 365 (K) LHFLAPsEEDEMNDKK (E) LHFLAPS(1.0)EEDEMNDKK K:TMT10,s:Phosphorylated S OGFOD1 63701.5 1 1 6979.1 8.35 HUMAN 1 -16.3377 -28.1666 KLHKFLGSDEEDKDS-p Q99567;S430-p KLHKFLGSDEEDKDS 0.966674008119051 0.0514610185239339 0.00633333333333333 0.230333333333333 0.285082430234231 17.1981851880049 0.00633333333333333 0.230333333333333 0.936465445365331 0.0190625713047374 0.0834875571011557 3.29922085962197 Q99567 NUP88 Q99567.S430.p_NUP88 Q99567_S430s _1_1_430_430 Q99567 Q99567 Nuclear pore complex protein Nup88 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22929.22929.3 13.08 13.08 4.11 4 1 1 0 1022.5098 2985.5508 S430s TMT10 427 (K) FLGsDEEDKDSLQELSTEQK (C) FLGS(0.99)DEEDKDS(0.0)LQELS(0.0)T(0.0)EQK K:TMT10,s:Phosphorylated S NUP88 84681.5 1 6 1211.1 166.39 HUMAN 1 0.2851 17.1982 KLHQMWLSWNQKQLQ-p O60664;S303-p KLHQMWLSWNQKQLQ 0.0893120313099172 0.00546361891682738 0.357333333333333 0.523333333333333 22.3453388991745 32.8190527303612 0.357333333333333 0.523333333333334 0.00582728300157915 0.000522510144861181 4.40134941542685 7.3247729341754 O60664 PLIN3 O60664.S303.p_PLIN3 O60664_S303s _1_1_303_303 O60664 O60664|O60664-3|O60664-4|O60664-2 Perilipin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23967.23967.3 15.62 15.62 99 1 1 1 0 670.3457 1929.0569 S303s TMT10 297 (K) LHQMWLsWNQK (Q) LHQMWLS(1.0)WNQK K:TMT10,s:Phosphorylated S PLIN3 47245.3 2 10 1075.1 180.54 HUMAN 1 22.3453 32.8191 KLHVGNISPTCTNKE-p Q9BWF3;S86-p KLHVGNISPTCTNKE 0.545054581641799 0.33706197113581 0.089 -0.094 4.86488266770557 6.25782159705882 0.089 -0.094 0.326220863705736 0.236710673058254 1.07923798877803 -1.33003596817081 Q9BWF3 RBM4 Q9BWF3.S86.p_RBM4 Q9BWF3_S86s _1_1_86_86 Q9BWF3 Q9BWF3|Q9BWF3-2|Q9BWF3-4|J3QRR5|D6R9K7|Q9BWF3-3 RNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14602.14602.3 12.93 12.93 1.142 3 1 1 0 660.3443 1899.0522 S86s TMT10 80 (K) LHVGNIsPTCTNK (E) LHVGNIS(0.99)PT(0.0)CT(0.0)NK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RBM4 40712.5 6 25 151.2 510.8 HUMAN 1 4.8649 -6.2578 KLHVGNISPTCTNQE-p Q9BQ04;S86-p KLHVGNISPTCTNQE 0.840000807577538 0.901761058886556 -0.03 -0.016 1.46265276624906 0.625966258338257 -0.03 -0.016 0.714060029262589 0.865771677078233 -0.386216341341345 -0.17721490721068 Q9BQ04 RBM4B Q9BQ04.S86.p_RBM4B Q9BQ04_S86s _1_1_86_86 Q9BQ04 Q9BQ04|U3KQD5 RNA-binding protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14788.14788.3 13.3 13.3 2.919 3 1 1 0 716.6885 2068.0807 S86s TMT10 80 (K) LHVGNIsPTCTNQELR (A) LHVGNIS(0.99)PT(0.0)CT(0.0)NQELR C:Carbamidomethylation,s:Phosphorylated S RBM4B 40491.2 1 24 151.3 510.8 HUMAN 1 -1.4627 -0.626 KLHYKHESWLLHRTL-p D6RFG8;S214-p KLHYKHESWLLHRTL 0.505331441375725 0.381818447077953 -0.138 -0.130666666666667 5.47291702651865 5.55567842429774 -0.138 -0.130666666666667 0.28360135228705 0.278248068033711 -1.19006012068966 -1.20471801887818 D6RFG8 NotFound D6RFG8.S214.p_NotFound D6RFG8_S214s _1_1_214_214 D6RFG8 D6RFG8|P27707 Deoxycytidine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12902.12902.5 11.87 11.87 11.872 2 1 1 0 432.2369 2077.186 S214s TMT10 208 (K) LHYKHEsWLLHR (T) LHY(0.0)KHES(0.99)WLLHR K:TMT10,s:Phosphorylated S DCK 37277.6 1 4 2927.1 65.76 HUMAN 1 -5.4729 -5.5557 KLIAGAESPQPASGS-p Q02156;S329-p KLIAGAESPQPASGS 0.167853660719156 0.543408214995881 0.254666666666667 0.0596666666666667 15.4758599076707 3.56164433945899 0.254666666666667 0.0596666666666667 0.0283409242463189 0.440388090809229 2.96818470356672 0.832221814779705 Q02156 PRKCE Q02156.S329.p_PRKCE Q02156_S329s _1_1_329_329 Q02156 Q02156|E9PBI2 Protein kinase C epsilon type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11597.11597.3 22.73 22.73 6.766 5 1 1 0 917.7924 2671.3939 S329s TMT10 322 (K) KLIAGAEsPQPASGSSPSEEDR (S) KLIAGAES(0.99)PQPAS(0.0)GS(0.0)S(0.0)PS(0.0)EEDR K:TMT10,s:Phosphorylated S PRKCE 85041.6 3 3 1089.1 179.15 HUMAN 1 15.4759 3.5616 KLIEGLKSPDTSLLL-p Q2M2I8;S797-p KLIEGLKSPDTSLLL 0.233628206047255 0.0385389764152398 -0.210666666666667 -0.303 12.1141327609926 18.9950062271934 -0.210666666666667 -0.303 0.0614591746763223 0.0126037383068814 -2.35259503123224 -3.6632999492972 Q2M2I8 AAK1 Q2M2I8.S797.p_AAK1 Q2M2I8_S797s _1_1_797_797 Q2M2I8 Q2M2I8 AP2-associated protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.37175.37175.4 22.5 22.5 1.242 7 1 1 0 1095.8468 4300.3857 S797s TMT10 791 (K) LIEGLKsPDTSLLLPDLLPMTDPFGSTSDAVIEK (A) LIEGLKS(0.99)PDT(0.0)S(0.0)LLLPDLLPMT(0.0)DPFGS(0.0)T(0.0)S(0.0)DAVIEK K:TMT10,s:Phosphorylated S AAK1 104624.8 1 10 818.1 219.02 HUMAN 1 -12.1141 -18.995 KLIPGPLSPVARGGS-p P48634;S1219-p KLIPGPLSPVARGGS 0.148303739525478 0.00739033881289099 -0.257 -0.502 16.7313403755948 30.475851233579 -0.257 -0.502 0.021225892600471 0.000896220506131155 -3.20990563781086 -6.56759096174615 P48634 PRRC2A P48634.S1219.p_PRRC2A P48634_S1219s _1_1_1219_1219 P48634 P48634|P48634-3|P48634-2 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20319.20319.3 15.67 11.25 99 1 1 1 0 639.0445 1835.1519 S1219s TMT10 1211 (K) EKLIPGPLsPVAR (G) EKLIPGPLS(1.0)PVAR K:TMT10,s:Phosphorylated S PRRC2A 229315.4 9 23 36.1 882.05 HUMAN 1 -16.7313 -30.4759 KLKAESISEEADSEP-p Q9NSI6-2;S1788-p KLKAESISEEADSEP 0.45060350179761 0.0552145170822894 -0.109 -0.24 6.39386538477387 16.7607634640295 -0.109 -0.24 0.229410589836534 0.0210825749814809 -1.35443705131929 -3.21325695992428 Q9NSI6 BRWD1 Q9NSI6.2.S1788.p_BRWD1 Q9NSI6-2_S1788s _1_1_1788_1788 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12346.12346.3 15.36 15.36 2.858 3 1 1 0 752.7107 2176.1498 S1788s TMT10 1782 (K) LKAESIsEEADSEPGR (S) LKAES(0.0)IS(0.99)EEADS(0.0)EPGR K:TMT10,s:Phosphorylated S BRWD1 259915.1 4 16 208.1 444.81 HUMAN 1 -6.3939 -16.7608 KLKAKYPSLGQKPGG-p Q5T5H1;S43-p KLKAKYPSLGQKPGG 0.235118035263392 0.84070341577723 -0.204666666666667 0.0473333333333334 12.0473300025833 1.05883645146902 -0.204666666666667 0.0473333333333334 0.0624118419087552 0.783639564966432 -2.3407324096039 0.28854385621564 Q5T5H1 NotFound Q5T5H1.S43.p_NotFound Q5T5H1_S43s _1_1_43_43 Q5T5H1 Q5T5H1|O43768-4|A6NMQ3|O43768-3|O43768-7|O43768-9|A0A1W2PRU0|O43768-2|O43768-5|O43768-6|O43768-8 Alpha-endosulfine HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21266.21266.4 14.81 14.81 4.503 3 1 1 0 730.91 2840.6514 S43s TMT10 39 (K) AKYPsLGQKPGGSDFLMK (R) AKY(0.0)PS(0.99)LGQKPGGS(0.0)DFLMK K:TMT10,s:Phosphorylated S ENSA 21164.7 3 6 1520.1 134.39 HUMAN 1 -12.0473 1.0588 KLKGSSHSPDHPGCL-p O95149;S350-p KLKGSSHSPDHPGCL 0.612333158440502 0.0961506923232575 0.0856666666666667 -0.261333333333333 3.94897738323116 13.4482015298129 0.0856666666666667 -0.261333333333333 0.402811871745418 0.0452043102574322 0.907363960385225 -2.59067242579849 O95149 SNUPN O95149.S350.p_SNUPN O95149_S350s _1_1_350_350 O95149 O95149 Snurportin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9792.9792.3 11.69 11.69 1.626 3 1 1 0 802.0441 2324.1528 S350s TMT10 344 (K) LKGSSHsPDHPGCLMEN (-) LKGS(0.0)S(0.0)HS(0.99)PDHPGCLMEN K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SNUPN 41598.2 7 3 2712.1 73.08 HUMAN 1 3.949 -13.4482 KLKIGERTNERIIKS-p Q6P0N0;T603-p KLKIGERTNERIIKS 0.434938046048568 0.052787460232866 0.206666666666667 -0.494333333333333 6.6626846956157 17.041554833923 0.206666666666667 -0.494333333333333 0.215641095983218 0.0197626198449733 1.40182890666957 -3.26832582446569 Q6P0N0 MIS18BP1 Q6P0N0.T603.p_MIS18BP1 Q6P0N0_T603t _1_1_603_603 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4047.4047.3 9.09 9.09 99 1 1 1 0 428.5485 1203.6643 T603t TMT10 599 (K) IGERtNER (I) IGERT(1.0)NER t:Phosphorylated T MIS18BP1 129996 1 20 54.1 728.39 HUMAN 1 6.6627 -17.0416 KLKKMWKSPNGTIRN-p P48735;S134-p KLKKMWKSPNGTIRN 0.421053324853859 0.00979173603864698 0.130333333333333 0.407666666666667 6.92272123497202 28.2770325695689 0.130333333333333 0.407666666666667 0.203108396030161 0.00148695129355429 1.44747907881251 5.91588443050152 P48735 IDH2 P48735.S134.p_IDH2 P48735_S134s _1_1_134_134 P48735 P48735|P48735-2 Isocitrate dehydrogenase [NADP], mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14252.14252.2 11.18 6.27 2.511 2 1 1 0 864.4579 1647.9405 S134s TMT10 131 (K) MWKsPNGTIR (N) MWKS(0.99)PNGT(0.0)IR K:TMT10,s:Phosphorylated S IDH2 51364.8 1 1 2889.1 66.75 HUMAN 1 6.9227 28.277 KLKQELASEEEGDAK-p Q8NCU4;S109-p KLKQELASEEEGDAK 0.306383440584975 0.630984865857374 -0.265666666666667 -0.078 9.62127135504998 2.71958415451005 -0.265666666666667 -0.078 0.109112087461889 0.534615547434166 -1.91598071672169 -0.66276940351485 Q8NCU4 KIAA1407 Q8NCU4.S109.p_KIAA1407 Q8NCU4_S109s _1_1_109_109 Q8NCU4 Q8NCU4 Coiled-coil domain-containing protein 191 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14321.14321.3 9.79 9.79 99 1 1 1 0 772.0757 2234.2483 S109s TMT10 103 (K) LKQELAsEEEGDAK (N) LKQELAS(1.0)EEEGDAK K:TMT10,s:Phosphorylated S CCDC191 111079.4 1 1 5981.1 14.89 HUMAN 1 -9.6213 -2.7196 KLKQRADSRESLKPA-p P46821;S541-p KLKQRADSRESLKPA 0.297184072075513 0.416062638933067 -0.253333333333333 0.112 9.92522888821276 5.0659409920291 -0.253333333333333 0.112 0.101736574607409 0.311462597242 -1.96872303293163 1.11590045893029 P46821 MAP1B P46821.S541.p_MAP1B P46821_S541s _1_1_541_541 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10687.10687.4 10.89 9.1 1.192 3 1 1 0 641.3715 2482.496 S541s Hydrogen 539 (R) ADsRESLKPAAKPLPSK (S) ADS(0.99)RES(0.0)LKPAAKPLPS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S MAP1B 271827.6 5 3 210.1 442.48 HUMAN 1 -9.9252 5.0659 KLKSFHLSPRGPPTS-p P78314-4;S397-p KLKSFHLSPRGPPTS 0.521613480576598 0.148487841740622 0.139666666666667 -0.542333333333333 5.22587527227687 10.9048248992232 0.139666666666667 -0.542333333333334 0.300201233765601 0.0811927983948574 1.14529446754504 -2.13848915563007 P78314 SH3BP2 P78314.4.S397.p_SH3BP2 P78314-4_S397s _1_1_397_397 P78314-4 P78314-4|P78314-3 Isoform 4 of SH3 domain-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11534.11534.3 10.09 10.09 10.088 2 1 1 0 384.8636 1072.6101 S397s TMT10 393 (K) SFHLsPR (G) S(0.0)FHLS(0.99)PR s:Phosphorylated S SH3BP2 68698.6 1 3 1751.1 117.58 HUMAN 1 5.2259 -10.9048 KLKWGEGTPKTLSTD-p Q9Y2H6;T975-p KLKWGEGTPKTLSTD 0.17565221846002 0.0116884830732904 -0.352666666666667 -0.646666666666667 15.0196140432748 27.0245546660865 -0.352666666666667 -0.646666666666667 0.0314802806635863 0.00198401309092381 -2.88213061251957 -5.56780085331289 Q9Y2H6 FNDC3A Q9Y2H6.T975.p_FNDC3A Q9Y2H6_T975t _1_1_975_975 Q9Y2H6 Q9Y2H6|Q9Y2H6-2 Fibronectin type-III domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15357.15357.3 12.67 5.66 99 1 1 1 0 595.0093 1703.0459 T975t TMT10 969 (K) LKWGEGtPK (T) LKWGEGT(1.0)PK K:TMT10,t:Phosphorylated T FNDC3A 133846.1 1 3 2471.1 82 HUMAN 1 -15.0196 -27.0246 KLKYKAISEELDHAL-p P09493-10;S271-p KLKYKAISEELDHAL 0.481533495886899 0.0209138742033657 0.156 0.462333333333333 5.84184886986795 22.9732271513191 0.156 0.462333333333333 0.26050442996013 0.00504286433618965 1.25633857514442 4.5430207069171 P09493 TPM1 P09493.10.S271.p_TPM1 P09493-10_S271s _1_1_271_271 P09493-10 P09493-10 Isoform 10 of Tropomyosin alpha-1 chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.33294.33294.3 12.55 12.55 5.629 3 1 1 0 695.9739 2005.9408 S271s TMT10 269 (K) AIsEELDHALNDMTSM (-) AIS(0.99)EELDHALNDMT(0.0)S(0.0)M s:Phosphorylated S TPM1 32865.3 1 1 2271.3 90.46 HUMAN 1 5.8418 22.9732 KLLAVAATAPPDAPN-p P18206-2;T614-p KLLAVAATAPPDAPN 0.547515630186733 0.529277958803199 0.0986666666666667 -0.075 4.82981006654891 3.71517082642495 0.0986666666666667 -0.075 0.328866013119732 0.42509198580644 1.07277561436557 -0.862138491586464 P18206 VCL P18206.2.T614.p_VCL P18206-2_T614t _1_1_614_614 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21902.21902.3 17.43 13.92 99 1 1 1 0 897.4519 2610.3725 T614t TMT10 608 (K) LLAVAAtAPPDAPNREEVFDER (A) LLAVAAT(1.0)APPDAPNREEVFDER t:Phosphorylated T VCL 117290.9 1 13 319.1 365.38 HUMAN 1 4.8298 -3.7152 KLLEKEDSEAADSKS-p A0A0J9YWL0;S818-p KLLEKEDSEAADSKS 0.761322933546513 0.0656874418996618 0.0446666666666667 -0.229333333333333 2.27240072948538 15.734491782875 0.0446666666666667 -0.229333333333333 0.592597652917821 0.0267024322422757 0.568316392092514 -3.01528740509026 A0A0J9YWL0 NotFound A0A0J9YWL0.S818.p_NotFound A0A0J9YWL0_S818s _1_1_818_818 A0A0J9YWL0 A0A0J9YWL0 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14644.14644.3 15.36 15.36 3.657 2 1 1 0 734.7219 2122.1846 S818s TMT10 812 (K) LLEKEDsEAADSK (S) LLEKEDS(0.99)EAADS(0.0)K K:TMT10,s:Phosphorylated S CRYBG1 233643.7 1 21 79.1 640.71 HUMAN 1 2.2724 -15.7345 KLLEPVVSMSDMLRS-p O75351;S410-p KLLEPVVSMSDMLRS 0.856577438544059 0.0783552900272358 0.047 0.276666666666667 1.30879622004184 14.6771735344984 0.047 0.276666666666667 0.7398103076906 0.0340629805495237 0.349638515353305 2.81633177321823 O75351 VPS4B O75351.S410.p_VPS4B O75351_S410s _1_1_410_410 O75351 O75351 Vacuolar protein sorting-associated protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.35330.35330.2 10.04 7.2 1.108 2 1 1 0 899.9605 1718.9382 S410s TMT10 404 (K) LLEPVVsMSDMLR (S) LLEPVVS(0.99)MS(0.0)DMLR s:Phosphorylated S VPS4B 49472.3 2 4 757.1 230.65 HUMAN 1 1.3088 14.6772 KLLFKRGSLITSLLR-p Q53FA7;S260-p KLLFKRGSLITSLLR 0.244677809939204 0.291683284001328 -0.197333333333333 0.161 11.6956965198743 7.0628233442957 -0.197333333333333 0.161 0.0676753246781745 0.196660738445441 -2.27847303876764 1.47159545552004 Q53FA7 TP53I3 Q53FA7.S260.p_TP53I3 Q53FA7_S260s _1_1_260_260 Q53FA7 Q53FA7 Quinone oxidoreductase PIG3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22331.22331.3 10.96 10.96 5.41 3 1 1 0 475.6112 1344.8525 S260s TMT10 258 (K) RGsLITSLLR (S) RGS(0.99)LIT(0.0)S(0.0)LLR s:Phosphorylated S TP53I3 35706.7 3 4 2518.1 80.27 HUMAN 1 -11.6957 7.0628 KLLGPNASPDGLIPW-p P42224;S532-p KLLGPNASPDGLIPW 0.398390547111241 0.72197682317235 -0.143 -0.0563333333333333 7.37676270887846 1.9494709562382 -0.143 -0.0563333333333333 0.182946341533313 0.638341242159727 -1.52681559942266 -0.497525482780329 P42224 STAT1 P42224.S532.p_STAT1 P42224_S532s _1_1_532_532 P42224 P42224|J3KPM9|P42224-2 Signal transducer and activator of transcription 1-alpha/beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32690.32690.3 17.35 17.35 17.351 2 1 1 0 672.6891 1936.0854 S532s TMT10 526 (K) LLGPNAsPDGLIPWTR (F) LLGPNAS(0.99)PDGLIPWT(0.0)R s:Phosphorylated S STAT1 87903.7 2 2 2688.1 73.96 HUMAN 1 -7.3768 -1.9495 KLLGTRKSFDHLISD-p P21359;S2543-p KLLGTRKSFDHLISD 0.1560557092084 0.318667388255672 -0.476 0.117 16.2050256214002 6.56724845384728 -0.476 0.117 0.0239605861404728 0.220432260660597 -3.10765696815732 1.38466960318476 P21359 NF1 P21359.S2543.p_NF1 P21359_S2543s _1_1_2543_2543 P21359 P21359|P21359-6|P21359-2 Neurofibromin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19020.19020.3 13.57 13.57 11.441 3 1 1 0 567.6273 1620.8997 S2543s TMT10 2543 (K) sFDHLISDTK (A) S(0.99)FDHLIS(0.0)DT(0.0)K K:TMT10,s:Phosphorylated S NF1 322961 3 12 437.1 312.53 HUMAN 1 -16.205 6.5672 KLLKEYYSTESEPLT-p A0JNW5;S774-p KLLKEYYSTESEPLT 0.481901097526115 0.0320849526179946 -0.106666666666667 -0.290666666666667 5.83291930731413 20.1586239109261 -0.106666666666667 -0.290666666666667 0.261040606169834 0.00964134467232289 -1.25474177590185 -3.9093805022568 A0JNW5 UHRF1BP1L A0JNW5.S774.p_UHRF1BP1L A0JNW5_S774s _1_1_774_774 A0JNW5 A0JNW5|A0A0C4DGH6 UHRF1-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19623.19623.3 20.61 20.61 1.16 10 1 1 0 1122.5266 3285.5952 S774s TMT10 771 (K) EYYsTESEPLTNGGQKPSSSDTFFR (F) EY(0.0)Y(0.0)S(0.99)T(0.0)ES(0.0)EPLT(0.0)NGGQKPS(0.0)S(0.0)S(0.0)DT(0.0)FFR K:TMT10,s:Phosphorylated S UHRF1BP1L 165621.9 5 6 398.1 328.88 HUMAN 1 -5.8329 -20.1586 KLLKGKKSVEEVASE-p P15924;S2000-p KLLKGKKSVEEVASE 0.354856925059928 0.04276017229564 -0.240666666666667 0.282333333333333 8.36106490132185 18.3414254226435 -0.240666666666667 0.282333333333333 0.145845659909057 0.0146506690408548 -1.69774508466473 3.52873756265104 P15924 DSP P15924.S2000.p_DSP P15924_S2000s _1_1_2000_2000 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31089.31089.3 16.44 16.44 8.405 2 1 1 0 638.3253 1832.9955 S2000s TMT10 2000 (K) sVEEVASEIQPFLR (G) S(0.99)VEEVAS(0.0)EIQPFLR s:Phosphorylated S DSP 334221.3 1 10 104.1 590.4 HUMAN 1 -8.3611 18.3414 KLLKREGTPPPPPPS-p Q9Y618;T1391-p KLLKREGTPPPPPPS 0.625010568942101 0.184150798704279 0.0703333333333333 -0.137333333333333 3.79102932418343 9.66127424242662 0.0703333333333333 -0.137333333333333 0.417731348133656 0.108111669953858 0.876967819886563 -1.92216971266259 Q9Y618 NCOR2 Q9Y618.T1391.p_NCOR2 Q9Y618_T1391t _1_1_1391_1391 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11155.11369.4 19.11 12.86 12.621 4 1 1 0 662.3476 2566.403 T1391t TMT10 1388 (K) REGtPPPPPPSRDLTEAYK (T) REGT(0.99)PPPPPPS(0.0)RDLT(0.0)EAY(0.0)K K:TMT10,t:Phosphorylated T NCOR2 275540.8 16 21 16.1 1053.89 HUMAN 1 3.791 -9.6613 KLLLIGDSGVGKSCL-p Q9H0U4;S17-p KLLLIGDSGVGKSCL 0.159987408261037 0.0793493508242918 -0.245666666666667 0.206 15.9327861187378 14.6020987645721 -0.245666666666667 0.206 0.0255106419963504 0.0346569327438072 -3.05529512618447 2.80238277187334 Q9H0U4 RAB1B Q9H0U4.S17.p_RAB1B Q9H0U4_S17s _1_1_17_17 Q9H0U4 Q15286|Q15286-2|P59190|P59190-2|P61006|P61006-2|Q92930|P62820|P51153|Q9H0U4|Q92928|P61026|E7END7|E9PLD0|P62820-2|P62820-3|H0YMN7 Ras-related protein Rab-1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28250.28250.3 8.9 8.9 99 1 1 1 0 537.3165 1529.9667 S17s TMT10 11 (K) LLLIGDsGVGK (S) LLLIGDS(1.0)GVGK K:TMT10,s:Phosphorylated S RAB1B 22341.9 1 19 2008.2 102.72 HUMAN 1 -15.9328 14.6021 KLLPETVSPSAPSWR-p B0QXZ6;S283-p KLLPETVSPSAPSWR 0.9421991389452 0.0095790145527617 -0.0126666666666667 0.494333333333333 0.50864384263614 28.4650341414476 -0.0126666666666667 0.494333333333333 0.889478829179303 0.00142395605237275 -0.145637712933454 5.96953391221787 B0QXZ6 CBX6 B0QXZ6.S283.p_CBX6 B0QXZ6_S283s _1_1_283_283 B0QXZ6 O95503|B0QXZ6 Chromobox protein homolog 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24711.24711.3 15.92 15.92 1.63 4 1 1 0 616.988 1768.9795 S283s TMT10 277 (K) LLPETVsPSAPSWR (E) LLPET(0.0)VS(0.99)PS(0.0)APS(0.0)WR s:Phosphorylated S CBX6 42145.5 2 5 1678.1 121.53 HUMAN 1 -0.5086 28.465 KLLPKIPSPRSTEER-p Q13796;S1373-p KLLPKIPSPRSTEER 0.619956161074258 0.513304242410888 0.116333333333333 -0.173333333333333 3.85981886731148 3.8862650832847 0.116333333333333 -0.173333333333333 0.411166869424504 0.408670690555228 0.890237225561083 -0.895177220768719 Q13796 SHROOM2 Q13796.S1373.p_SHROOM2 Q13796_S1373s _1_1_1373_1373 Q13796 Q13796|F5H3B6 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20535.20535.3 9.45 9.45 99 1 1 1 0 520.3214 1478.9823 S1373s TMT10 1367 (K) LLPKIPsPR (S) LLPKIPS(1.0)PR K:TMT10,s:Phosphorylated S SHROOM2 177605.1 2 25 90.1 622.62 HUMAN 1 3.8598 -3.8863 KLLPWEPSLESEEEV-p J3KPJ0;S19-p KLLPWEPSLESEEEV 0.929227657659637 0.87068783194213 0.0133333333333333 0.0183333333333333 0.633319694856411 0.847325887585023 0.0133333333333333 0.0168700646068883 0.864307000318986 0.822749091184735 0.17919002051585 0.235108024653852 J3KPJ0 GGT6 J3KPJ0.S19.p_GGT6 J3KPJ0_S19sS22s_2_2_19_22 J3KPJ0 J3KPJ0|Q6P531|Q6P531-2 Glutathione hydrolase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.37094.37308.4 13.57 13.57 1.67 4 2 2 0 911.4156 3482.7264 S19s S22s TMT10 13 (K) LLPWEPsLEsEEEVEEEETSEALVLNPR (R) LLPWEPS(0.99)LES(0.99)EEEVEEEET(0.0)S(0.0)EALVLNPR s:Phosphorylated S GGT6 51748.7 2 2 4811.1 26.34 HUMAN 1 0.6333 0.8473 KLLQNGNSPAEVAKI-p Q9Y6Q9;S694-p KLLQNGNSPAEVAKI 0.336200474871642 0.00870908219484074 0.137 0.519 8.82543242762676 29.2119780716684 0.137 0.519 0.131055954327114 0.00119895309420006 1.77814489544897 6.18643489512989 Q9Y6Q9 NCOA3 Q9Y6Q9.S694.p_NCOA3 Q9Y6Q9_S694s_1_1_694_694 Q9Y6Q9 Q9Y6Q9|Q9Y6Q9-5|Q9Y6Q9-3|Q9Y6Q9-2|Q9Y6Q9-4 Nuclear receptor coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17785.17785.2 14.96 14.96 3.251 1 1 1 0 940.4982 1799.0427 N691n S694s TMT10 688 (K) LLQnGNsPAEVAK (I) LLQN(0.99)GN(0.0)S(1.0)PAEVAK K:TMT10,n:Deamidated,s:Phosphorylated S NCOA3 156203.6 7 8 503.1 290.6 HUMAN 1 8.8254 29.212 KLLQSAKTILRGTEE-p O00418;T348-p KLLQSAKTILRGTEE 0.420944975696746 0.0237926524415323 0.150333333333333 0.553666666666667 6.92968551786542 22.1390143394462 0.150333333333333 0.553666666666667 0.202782955377881 0.00611080698045449 1.44869933522101 4.34915432056981 O00418 EEF2K O00418.T348.p_EEF2K O00418_T348t _1_1_348_348 O00418 O00418|H3BRH4 Eukaryotic elongation factor 2 kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22981.22981.5 14.24 14.24 2.721 3 1 1 0 491.6914 2374.4637 T348t TMT10 342 (K) LLQSAKtILRGTEEK (C) LLQS(0.0)AKT(0.99)ILRGT(0.0)EEK K:TMT10,t:Phosphorylated T EEF2K 82713.2 9 3 995.1 190.99 HUMAN 1 6.9297 22.139 KLLSPQMSGEEEDSD-p P42858;S1874-p KLLSPQMSGEEEDSD 0.486491833808247 0.0874931058664352 0.111 0.211 5.76343619651074 14.0069833684835 0.111 0.211 0.265250603295167 0.0397467536575807 1.24230473089578 2.69258453879557 P42858 HTT P42858.S1874.p_HTT P42858_S1874s_1_1_1874_1874 P42858 P42858 Huntingtin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20151.20151.3 18.77 16.73 4.993 3 1 1 0 825.3983 2378.2161 M1873m S1874s TMT10 1868 (K) LLSPQmsGEEEDSDLAAK (L) LLS(0.0)PQM(1.0)S(0.99)GEEEDS(0.0)DLAAK K:TMT10,m:Oxidized methionine,s:Phosphorylated S HTT 351590.8 2 12 343.1 353.16 HUMAN 1 5.7634 14.007 KLLTGIKSPRSYTPK-p Q8IWI9-4;S1208-p KLLTGIKSPRSYTPK 0.731860069286155 0.00367393692390682 -0.0506666666666667 -0.637 2.57054741669009 36.1530081859778 -0.0506666666666667 -0.637 0.553280365295891 0.000242492986030056 -0.631749329965676 -8.5285195144657 Q8IWI9 MGA Q8IWI9.4.S1208.p_MGA Q8IWI9-4_S1208s _1_1_1208_1208 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16904.17325.3 11.79 8.81 3.768 2 1 1 0 508.3097 1442.9459 S1208s TMT10 1202 (K) LLTGIKsPR (S) LLT(0.0)GIKS(0.99)PR K:TMT10,s:Phosphorylated S MGA 338321.5 2 11 141.1 523.06 HUMAN 1 -2.5705 -36.153 KLMDKFHSPKIKRTP-p Q13905;S23-p KLMDKFHSPKIKRTP 0.281952220537848 0.0133793494018082 -0.332 0.447 10.395789807491 26.0555048922864 -0.332 0.447 0.0912895401133903 0.00247998760812575 -2.05056447037307 5.30917348854089 Q13905 RAPGEF1 Q13905.S23.p_RAPGEF1 Q13905_S23s _1_1_23_23 Q13905 Q13905|Q13905-2 Rap guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31065.31065.5 7.78 3.2 5.194 7 1 1 0 790.9979 3871.0475 S23s TMT10 1 (-) MDTDSQRSHLSSFTMKLMDKFHsPK (I) MDT(0.0)DS(0.0)QRS(0.0)HLS(0.0)S(0.0)FT(0.0)MKLMDKFHS(0.99)PK K:TMT10,s:Phosphorylated S RAPGEF1 121287.1 1 1 676.2 246.9 HUMAN 1 -10.3958 26.0555 KLMTGSETPSKVVIK-p Q5VUA4;T1847-p KLMTGSETPSKVVIK 0.309869250687191 0.00705277551166316 -0.214 -0.758333333333333 9.51483396879483 30.8151094447185 -0.214 -0.758333333333333 0.111819257237849 0.000828875027880344 -1.8975292114928 -6.67304987402779 Q5VUA4 ZNF318 Q5VUA4.T1847.p_ZNF318 Q5VUA4_T1847t _1_1_1847_1847 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14044.14044.2 12.43 7.77 1.803 4 1 1 0 794.9084 1508.8395 T1847t TMT10 1841 (K) LMTGSEtPSK (V) LMT(0.0)GS(0.0)ET(0.99)PS(0.0)K K:TMT10,t:Phosphorylated T ZNF318 252762.4 2 25 37.1 870.88 HUMAN 1 -9.5148 -30.8151 KLMTGVISPERRCRS-p Q14680;S498-p KLMTGVISPERRCRS 0.951730353840408 0.00627523220229034 0.00999999999999999 -0.56 0.425922574626413 31.7165455463741 0.01 -0.56 0.906583358027406 0.000673512166536551 0.12295115341813 -6.95999951407431 Q14680 MELK Q14680.S498.p_MELK Q14680_S498s _1_1_498_498 Q14680 Q14680|Q14680-6|Q14680-7|Q14680-8|Q14680-2|Q14680-5|Q14680-4|Q14680-3 Maternal embryonic leucine zipper kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15473.15473.3 10.15 10.15 2.433 2 1 1 0 523.2803 1487.8565 S498s TMT10 492 (K) LMTGVIsPERR (C) LMT(0.0)GVIS(0.99)PERR s:Phosphorylated S MELK 75553.6 4 5 1543.1 132.89 HUMAN 1 0.4259 -31.7165 KLNDELQSPEKKARP-p Q12955;S2608-p KLNDELQSPEKKARP 0.544425421338856 0.00294705692336654 -0.0916666666666667 -0.901333333333333 4.87757570424967 38.172255771045 -0.0916666666666667 -0.901333333333333 0.325268816560556 0.000152326135037715 -1.08157472595183 -9.33889496538471 Q12955 ANK3 Q12955.S2608.p_ANK3 Q12955_S2608s _1_1_2608_2608 Q12955 Q12955 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13426.13426.3 14.86 9.15 99 1 1 1 0 690.0493 1988.1631 S2608s TMT10 2602 (K) LNDELQsPEKK (A) LNDELQS(1.0)PEKK K:TMT10,s:Phosphorylated S ANK3 482683.6 3 25 135.1 530.51 HUMAN 1 -4.8776 -38.1723 KLNIEGKSKKSRFKL-p Q09666;S3347-p KLNIEGKSKKSRFKL 0.465076272777371 0.622724827609693 0.123 -0.0646666666666667 6.13612864203278 2.79585767634428 0.123 -0.0646666666666667 0.243437307424757 0.525308263167359 1.30877770981193 -0.678543082049408 Q09666 AHNAK Q09666.S3347.p_AHNAK Q09666_S3347s _1_1_3347_3347 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13497.13497.3 9.94 9.94 99 1 1 1 0 552.6617 1576.0037 S3347s TMT10 3341 (K) LNIEGKsK (K) LNIEGKS(1.0)K K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 81 1.1 4313.36 HUMAN 1 6.1361 -2.7959 KLNQNSRSEAPNWAT-p P60228;S432-p KLNQNSRSEAPNWAT 0.477468266229797 0.241100800250381 -0.103333333333333 0.115333333333333 5.90824811381256 8.13817230395856 -0.103333333333333 0.115333333333333 0.256551872395104 0.153526295086399 -1.26820147179324 1.65858633928015 P60228 EIF3E P60228.S432.p_EIF3E P60228_S432s _1_1_432_432 P60228 P60228|E5RGA2 Eukaryotic translation initiation factor 3 subunit E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18611.18611.3 10.21 10.21 1.231 5 1 1 0 984.4751 2871.4426 S432s TMT10 425 (K) KLNQNSRsEAPNWATQDSGFY (-) KLNQNS(0.0)RS(0.99)EAPNWAT(0.0)QDS(0.0)GFY(0.0) K:TMT10,s:Phosphorylated S EIF3E 52619.2 2 4 2988.1 63.95 HUMAN 1 -5.9082 8.1382 KLNRGSLSLDDFRNT-p Q9Y5W7;S487-p KLNRGSLSLDDFRNT 0.754034243382836 0.0656181623147116 -0.059 -0.244666666666667 2.34283019250807 15.7424688832512 -0.059 -0.244666666666667 0.583065011017945 0.026653430358796 -0.583453458857177 -3.01680704517435 Q9Y5W7 SNX14 Q9Y5W7.S487.p_SNX14 Q9Y5W7_S487s _1_1_487_487 Q9Y5W7 Q9Y5W7|Q9Y5W7-3 Sorting nexin-14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16976.16976.3 12.65 8.02 1.784 3 1 1 0 673.6831 1939.0649 S487s TMT10 484 (R) GSLsLDDFRNTQK (R) GS(0.0)LS(0.99)LDDFRNT(0.0)QK K:TMT10,s:Phosphorylated S SNX14 111149.6 2 1 5033.1 23.71 HUMAN 1 -2.3428 -15.7425 KLPAPTRTPATAPVP-p P18887;T281-p KLPAPTRTPATAPVP 0.3728639655768 0.566852595532003 -0.131333333333333 -0.114 7.9488131273111 3.32534867385592 -0.131333333333333 -0.114 0.160368359754809 0.46501304103903 -1.62627977196158 -0.785636559611999 P18887 XRCC1 P18887.T281.p_XRCC1 P18887_T281t _1_1_281_281 P18887 P18887|F5H8D7 DNA repair protein XRCC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12945.12945.3 11.61 11.61 1.104 3 1 1 0 642.358 1845.0908 T281t TMT10 275 (K) LPAPTRtPATAPVPAR (A) LPAPT(0.0)RT(0.99)PAT(0.0)APVPAR t:Phosphorylated T XRCC1 69817.6 1 8 433.1 315.31 HUMAN 1 -7.9488 -3.3253 KLPDVKPSPINLRKK-p A2AJT9;S402-p KLPDVKPSPINLRKK 0.158297715435374 0.0689732550722136 -0.520333333333333 -0.219666666666667 16.0510093268932 15.4419810925294 -0.520333333333333 -0.219666666666667 0.0248255607705538 0.028562873123866 -3.07799074071734 -2.95976188175464 A2AJT9 CXorf23 A2AJT9.S402.p_CXorf23 A2AJT9_S402s _1_1_402_402 A2AJT9 A2AJT9|A2AJT9-2|A2AJT9-3 BCLAF1 and THRAP3 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17018.17018.3 13.51 13.51 7.714 2 1 1 0 820.4821 2379.4691 S402s TMT10 393 (K) SQKLPDVKPsPINLR (K) S(0.0)QKLPDVKPS(0.99)PINLR K:TMT10,s:Phosphorylated S BCLAF3 84269.3 4 9 1202.1 166.95 HUMAN 1 -16.051 -15.442 KLPEEVATPTTDEEK-p O95602;T357-p KLPEEVATPTTDEEK 0.141585108983502 0.0567501219787073 -0.331 0.286666666666667 17.3472462945021 16.6058021712087 -0.331 0.286666666666667 0.0184193953906144 0.0218484072755846 -3.33134396772955 3.18303687417978 O95602 POLR1A O95602.T357.p_POLR1A O95602_T357t _1_1_357_357 O95602 O95602|B9ZVN9 DNA-directed RNA polymerase I subunit RPA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29365.29365.4 18.79 18.79 2.509 3 1 1 0 863.7128 3371.8587 T357t TMT10 341 (K) LLALMAQEQKLPEEVAtPTTDEEK (D) LLALMAQEQKLPEEVAT(0.99)PT(0.0)T(0.0)DEEK K:TMT10,t:Phosphorylated T POLR1A 196804.6 1 1 2697.1 73.69 HUMAN 1 -17.3472 16.6058 KLPEVPPSEEEEQEA-p Q8IWB9;S815-p KLPEVPPSEEEEQEA 0.201694340984261 0.126350116164881 0.231 0.162 13.5042567884289 11.8464747180128 0.231 0.162 0.0446245984474181 0.0653660931044788 2.60234072083207 2.3040004197844 Q8IWB9 TEX2 Q8IWB9.S815.p_TEX2 Q8IWB9_S815s _1_1_815_815 Q8IWB9 Q8IWB9-2|A0A087WVA8 Testis-expressed protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.32338.32540.4 26.85 26.85 99 1 1 1 0 790.41 3078.6512 S815s TMT10 808 (K) KLPEVPPsEEEEQEAWVNALLGR (I) KLPEVPPS(1.0)EEEEQEAWVNALLGR K:TMT10,s:Phosphorylated S TEX2 125928 4 19 300.1 376.78 HUMAN 1 13.5043 11.8465 KLPKDRQYVVRLMAP-p Q9BW85;Y31-p KLPKDRQYVVRLMAP 0.499914243414761 0.115641339945814 -0.123333333333333 0.424 5.55013790685807 12.3581771801646 -0.123333333333333 0.424 0.278603269890882 0.0581008226995964 -1.2039869598848 2.39479403665054 Q9BW85 CCDC94 Q9BW85.Y31.p_CCDC94 Q9BW85_Y31y _1_1_31_31 Q9BW85 Q9BW85 Coiled-coil domain-containing protein 94 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.5087.5087.2 12.81 1.94 99 1 1 1 0 622.8209 1164.6687 Y31y TMT10 28 (K) DRQyVVR (L) DRQY(1.0)VVR y:Phosphorylated Y CCDC94 37370.4 3 1 276.1 12.81 HUMAN 1 -5.5501 12.3582 KLPKFNFSGSKVQTP-p Q09666;S3360-p KLPKFNFSGSKVQTP 0.112507468607091 0.152137558117411 -0.305333333333333 -0.149 19.8135061331883 10.7530118104866 -0.305333333333333 -0.149 0.0104387713918839 0.0840811840608939 -3.83904059948796 -2.111965582836 Q09666 AHNAK Q09666.S3360.p_AHNAK Q09666_S3360s _1_1_3360_3360 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18039.18039.2 9.12 9.12 1.144 2 1 1 0 662.8387 1244.7039 S3360s TMT10 3357 (K) FNFsGSK (V) FNFS(0.99)GS(0.0)K K:TMT10,s:Phosphorylated S AHNAK 629603.7 4 82 1.1 4313.36 HUMAN 1 -19.8135 -10.753 KLPKSLSSPGGPSKP-p Q9BZE9-2;S275-p KLPKSLSSPGGPSKP 0.535927633673308 0.0178038368389318 -0.123666666666667 -0.422333333333333 5.01505913531409 24.0981233095029 -0.123666666666667 -0.422333333333334 0.315133147009333 0.00389213297050159 -1.10681706469503 -4.81319924396467 Q9BZE9 ASPSCR1 Q9BZE9.2.S275.p_ASPSCR1 Q9BZE9-2_S275s _1_1_275_275 Q9BZE9-2 Q9BZE9-2|Q9BZE9-3|J3QR12|Q9BZE9-4 Isoform 2 of Tether containing UBX domain for GLUT4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9678.9678.2 10.17 5.11 1.112 4 1 1 0 727.8861 1374.7993 S275s TMT10 272 (K) SLSsPGGPSK (P) S(0.0)LS(0.0)S(0.99)PGGPS(0.0)K K:TMT10,s:Phosphorylated S ASPSCR1 70673.5 9 3 1375.1 148.73 HUMAN 1 -5.0151 -24.0981 KLPNSKQSQDEPLRS-p Q13148;S183-p KLPNSKQSQDEPLRS 0.624678156444405 0.302046968669897 0.084 0.115333333333333 3.79902156569766 6.86320805568933 0.084 0.115333333333333 0.416963311731221 0.20591083248498 0.878512041503285 1.43665744931031 Q13148 TARDBP Q13148.S183.p_TARDBP Q13148_S183s _1_1_183_183 Q13148 Q13148|A0A087WYY0|A0A087X260|Q13148-4|G3V162|B1AKP7 TAR DNA-binding protein 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14960.14960.4 13.52 8.41 2.201 2 1 1 0 757.8809 2948.5326 S183s TMT10 172 (R) WCDCKLPNSKQsQDEPLR (S) WCDCKLPNS(0.0)KQS(0.99)QDEPLR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TARDBP 45081.4 1 2 2002.1 103.31 HUMAN 1 3.799 6.8632 KLPPPPGSPLGHSPT-p M0QXA7;S463-p KLPPPPGSPLGHSPT 0.285640692994416 0.0277238968700976 -0.206333333333333 -0.461666666666667 10.2690317663426 21.1107427981683 -0.206333333333333 -0.461666666666667 0.0939932839630425 0.00774329348592159 -2.02849168173853 -4.11735831046846 M0QXA7 WIZ M0QXA7.S463.p_WIZ M0QXA7_S463s _1_1_463_463 M0QXA7 O95785-4|B9EGQ5|O95785-2|M0QXA7|O95785-3 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13911.14135.4 10.66 10.66 1.319 5 1 1 0 700.134 2717.5503 S463s TMT10 456 (K) KLPPPPGsPLGHSPTASPPPTAR (K) KLPPPPGS(0.99)PLGHS(0.0)PT(0.0)AS(0.0)PPPT(0.0)AR K:TMT10,s:Phosphorylated S WIZ 104190.1 3 12 195.1 461.51 HUMAN 1 -10.269 -21.1107 KLPSFRWSPKKETGP-p Q8IVF2;S4966-p KLPSFRWSPKKETGP 0.14685232684758 0.00481111613799276 -0.352666666666667 -1.01266666666667 16.9166870099498 33.8483351011197 -0.352666666666667 -1.01266666666667 0.0203390797408965 0.000412255529906658 -3.24624354829558 -7.67971704403207 Q8IVF2 AHNAK2 Q8IVF2.S4966.p_AHNAK2 Q8IVF2_S4966s _1_1_4966_4966 Q8IVF2 Q8IVF2 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24724.24724.4 9.84 9.84 4.133 2 1 1 0 532.3179 2046.2831 S4966s TMT10 4958 (K) IKLPSFRWsPK (K) IKLPS(0.0)FRWS(0.99)PK K:TMT10,s:Phosphorylated S AHNAK2 617759.6 5 22 237.1 418.35 HUMAN 1 -16.9167 -33.8483 KLPTGQISGPEIKGG-p Q09666;S5519-p KLPTGQISGPEIKGG 0.178245262156371 0.628997594263498 0.236666666666667 0.0846666666666667 14.7936725053208 2.73806849339597 0.236666666666667 0.0846666666666667 0.033161391773516 0.532344964829933 2.83984311107316 0.666600743641068 Q09666 AHNAK Q09666.S5519.p_AHNAK Q09666_S5519s _1_1_5519_5519 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21540.21540.3 13.54 8.49 2.195 2 1 1 0 788.1299 2282.4051 S5519s TMT10 5513 (K) LPTGQIsGPEIKGGLK (G) LPT(0.0)GQIS(0.99)GPEIKGGLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 9 143 1.1 4313.36 HUMAN 1 14.7937 2.7381 KLPVKSHSECGIIEK-p Q9UHI6;S522-p KLPVKSHSECGIIEK 0.47558115383855 0.0189613448383213 -0.0973333333333333 -0.351 5.94290540873981 23.6830673929254 -0.0973333333333334 -0.351 0.254512700545839 0.00428245946304755 -1.27438596954956 -4.71230418644147 Q9UHI6 DDX20 Q9UHI6.S522.p_DDX20 Q9UHI6_S522s _1_1_522_522 Q9UHI6 Q9UHI6|E9PJ60 Probable ATP-dependent RNA helicase DDX20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9491.9491.3 14.07 14.07 1.158 2 1 1 0 566.6158 1617.8671 S522s TMT10 520 (K) SHsECGIIEK (A) S(0.0)HS(0.99)ECGIIEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DDX20 93037.6 1 6 610.1 261.86 HUMAN 1 -5.9429 -23.6831 KLQDASRSAQALVEQ-p A0A087WTU7;S783-p KLQDASRSAQALVEQ 0.207422631751664 0.363702374721809 0.205666666666667 0.107 13.185250125581 5.82295052048831 0.205666666666667 0.107 0.0480258419659022 0.261640486472229 2.54450221110708 1.2526689179713 A0A087WTU7 NotFound A0A087WTU7.S783.p_NotFound A0A087WTU7_S781sS783sS800s_3_3_781_800 A0A087WTU7 A0A087WTU7|E9PDN5|A0A087WV90|P11532-4 Dystrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4140.4140.5 8.61 2.45 99 3 3 3 0 724.3325 3359.7993 S781s S783s M791m N793n N797n S800s Hydrogen 776 (R) KLQDAsRsAQALVEQmVnEGVnADsIK (Q) KLQDAS(1.0)RS(1.0)AQALVEQM(1.0)VN(1.0)EGVN(1.0)ADS(1.0)IK K:TMT10-Lys-Only,s:Phosphorylated S,m:Oxidized methionine,n:Deamidated DMD 428951.2 1 6 2745.1 71.99 HUMAN 1 13.1853 5.823 KLQGPKASPTQCHRS-p Q9NPG3;S833-p KLQGPKASPTQCHRS 0.246065561023083 0.060200960658266 0.207 -0.368 11.6532195296852 16.2583836048181 0.207 -0.368 0.0683404834970257 0.0236680043005801 2.27097210458127 -3.11571539699757 Q9NPG3 UBN1 Q9NPG3.S833.p_UBN1 Q9NPG3_S833s _1_1_833_833 Q9NPG3 Q9NPG3|Q9NPG3-2 Ubinuclein-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5985.5985.4 8.23 8.23 1.194 2 1 1 0 505.2664 1938.0744 S833s TMT10 827 (K) LQGPKAsPTQCHR (S) LQGPKAS(0.99)PT(0.0)QCHR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S UBN1 122088.8 2 6 1087.1 179.43 HUMAN 1 11.6532 -16.2584 KLQGSGVSLASKKSR-p Q09666;S5854-p KLQGSGVSLASKKSR 0.100510787868295 0.00926447542666619 -0.606333333333333 0.497333333333333 21.1093625569692 28.7133838743591 -0.606333333333333 0.497333333333333 0.00774575479078242 0.00134481211403769 -4.12118047577104 6.04098148516585 Q09666 AHNAK Q09666.S5854.p_AHNAK Q09666_S5854sS5857s_2_2_5854_5857 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17835.17835.4 8.2 8.2 1.61 3 2 2 0 506.2813 1862.1678 S5854s S5857s TMT10 5848 (K) LQGSGVsLAsKK (S) LQGS(0.0)GVS(0.99)LAS(0.99)KK K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 186 1.1 4313.36 HUMAN 1 -21.1094 28.7134 KLQIGPPSPGEAQGP-p Q9HCH0;S436-p KLQIGPPSPGEAQGP 0.590663365580808 0.0377964801348101 0.0973333333333333 -0.261 4.21506350598427 19.1054737061341 0.0973333333333334 -0.261 0.378872993526471 0.0122871915688882 0.958022367342916 -3.68629659276626 Q9HCH0 NCKAP5L Q9HCH0.S436.p_NCKAP5L Q9HCH0_S436s _1_1_436_436 Q9HCH0 Q9HCH0|Q9HCH0-3|Q9HCH0-2 Nck-associated protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27462.27462.3 20.33 20.33 9.85 2 1 1 0 797.7595 2311.2971 S436s TMT10 430 (K) LQIGPPsPGEAQGPLLPSPAR (G) LQIGPPS(0.99)PGEAQGPLLPS(0.0)PAR s:Phosphorylated S NCKAP5L 140323.1 4 3 609.1 261.98 HUMAN 1 4.2151 -19.1055 KLQKEAGTPPLWKIA-p P55265-4;T234-p KLQKEAGTPPLWKIA 0.921972459506391 0.00972320848707144 0.0166666666666667 -0.482666666666667 0.691715788935913 28.3301947429469 0.0166666666666667 -0.482666666666667 0.85276314205676 0.00146886041067333 0.194654335557568 -5.93101726748727 P55265 ADAR P55265.4.T234.p_ADAR P55265-4_T234t _1_1_234_234 P55265-4 P55265-4|P55265-2|P55265-3 Isoform 4 of Double-stranded RNA-specific adenosine deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19645.19645.2 11.52 5.47 99 1 1 1 0 768.9163 1456.8564 T234t TMT10 231 (K) EAGtPPLWK (I) EAGT(1.0)PPLWK K:TMT10,t:Phosphorylated T ADAR 142147.5 2 3 584.1 265.43 HUMAN 1 0.6917 -28.3302 KLQLRVPSVESLFRS-p Q13439-5;S93-p KLQLRVPSVESLFRS 0.228095422318106 0.552136179686503 0.221 -0.077 12.3357909426519 3.47453880590694 0.221 -0.077 0.0584010836608219 0.44931003610595 2.39204008362524 -0.815127836405862 Q13439 GOLGA4 Q13439.5.S93.p_GOLGA4 Q13439-5_S93s _1_1_93_93 Q13439-5 Q13439-5|Q13439-4|Q13439-3|Q86W71 Isoform 5 of Golgin subfamily A member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.31113.31514.3 14.51 14.51 2.261 2 1 1 0 618.3458 1773.0584 S93s TMT10 87 (K) LQLRVPsVESLFR (S) LQLRVPS(0.99)VES(0.0)LFR s:Phosphorylated S GOLGA4 263236.4 12 4 575.1 268.28 HUMAN 1 12.3358 -3.4745 KLQMYFQSPKRSGGG-p Q460N5;S33-p KLQMYFQSPKRSGGG 0.981575064370413 0.556305103479485 0.00366666666666667 0.0716666666666667 0.161190240675658 3.43188740379136 0.00366666666666667 0.0716666666666667 0.963564909901723 0.453744380668959 0.0478333255201806 0.806724707282943 Q460N5 PARP14 Q460N5.S33.p_PARP14 Q460N5_S33s _1_1_33_33 Q460N5 Q460N5|Q460N5-1|Q460N5-4 Poly [ADP-ribose] polymerase 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23127.23127.2 14.5 10.33 7.242 2 1 1 0 840.4338 1599.8969 S33s TMT10 27 (K) LQMYFQsPK (R) LQMY(0.0)FQS(0.99)PK K:TMT10,s:Phosphorylated S PARP14 204850.4 6 1 2974.1 64.3 HUMAN 1 0.1612 3.4319 KLQPIALSCVLNIGA-p Q08752;S274-p KLQPIALSCVLNIGA 0.974846454002394 0.104951883938816 -0.00500000000000001 0.322333333333333 0.215812311922604 12.9323318076751 -0.00500000000000001 0.322333333333333 0.951521857171028 0.0509057475261933 -0.063666058792635 2.49751882761409 Q08752 PPID Q08752.S274.p_PPID Q08752_S274s _1_1_274_274 Q08752 Q08752 Peptidyl-prolyl cis-trans isomerase D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.35811.35811.3 11.58 11.58 99 1 1 1 0 765.7474 2215.2707 S274s TMT10 268 (K) LQPIALsCVLNIGACK (L) LQPIALS(1.0)CVLNIGACK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PPID 41162.2 3 1 6454.1 11.58 HUMAN 1 -0.2158 12.9323 KLQPQEISPPPTANL-p E7ESA6;S954-p KLQPQEISPPPTANL 0.0535532043246163 0.39718243885781 -0.568 -0.110666666666667 27.6102485663309 5.33110414493601 -0.568 -0.110666666666667 0.00173370476716675 0.293014819327995 -5.73672525393482 -1.16415464886485 E7ESA6 NotFound E7ESA6.S954.p_NotFound E7ESA6_S954s _1_1_954_954 E7ESA6 E7ESA6|Q05397-5|Q05397-7|Q05397-2|E9PEI4|B4DWJ1|Q05397-6 Focal adhesion kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16675.16675.4 14.68 14.41 14.564 3 1 1 0 690.3616 2678.4514 S954s TMT10 948 (K) LQPQEIsPPPTANLDRSNDK (V) LQPQEIS(0.99)PPPT(0.0)ANLDRS(0.0)NDK K:TMT10,s:Phosphorylated S PTK2 124992.4 5 9 979.1 192.68 HUMAN 1 -27.6102 -5.3311 KLQVTQRSLEESQGK-p O75330-3;S202-p KLQVTQRSLEESQGK 0.675566314850368 0.0881506465505843 0.0686666666666667 -0.196666666666667 3.19244741370106 13.9625475158168 0.0686666666666667 -0.196666666666667 0.479463176851193 0.0401555194615962 0.759236686889366 -2.68443960365384 O75330 HMMR O75330.3.S202.p_HMMR O75330-3_S202s _1_1_202_202 O75330-3 O75330-3|O75330-2|O75330-4 Isoform 3 of Hyaluronan mediated motility receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12479.12479.3 12.81 12.81 2.132 3 1 1 0 714.3842 2061.1704 S202s TMT10 196 (K) LQVTQRsLEESQGK (I) LQVT(0.0)QRS(0.99)LEES(0.0)QGK K:TMT10,s:Phosphorylated S HMMR 84626.5 3 3 2460.1 82.37 HUMAN 1 3.1924 -13.9625 KLRAGKLSPLKSKFK-p Q03164-3;S279-p KLRAGKLSPLKSKFK 0.101218422745456 0.000952253650599092 -0.418333333333333 -1.50866666666667 21.0276076321984 54.5648745969274 -0.418333333333333 -1.50866666666667 0.00789294791215813 3.49552602827823e-06 -4.1030394110357 -19.1072179670084 Q03164 KMT2A Q03164.3.S279.p_KMT2A Q03164-3_S279s _1_1_279_279 Q03164-3 Q03164-3|Q03164-2|A0A0A6YY96|H0YNL8 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13923.13923.2 9.7 4.01 99 1 1 1 0 790.9899 1501.0081 S279s TMT10 275 (R) AGKLsPLK (S) AGKLS(1.0)PLK K:TMT10,s:Phosphorylated S KMT2A 436608.3 7 7 26.1 936.8 HUMAN 1 -21.0276 -54.5649 KLRAIERSPGGRPIH-p Q6P444;S291-p KLRAIERSPGGRPIH 0.159218097216071 0.00196312166393669 -0.300666666666667 -0.926333333333333 15.9844282477066 42.3199398897063 -0.300666666666667 -0.926333333333333 0.0252090903756304 5.86146277253777e-05 -3.06520091580941 -11.225705482699 Q6P444 MTFR2 Q6P444.S291.p_MTFR2 Q6P444_S291s _1_1_291_291 Q6P444 Q6P444 Mitochondrial fission regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5521.5521.4 13.52 8.82 99 1 1 1 0 489.7784 1876.1281 S291s TMT10 287 (R) AIERsPGGRPIHK (R) AIERS(1.0)PGGRPIHK K:TMT10,s:Phosphorylated S MTFR2 43611.5 5 2 4205.1 35.43 HUMAN 1 -15.9844 -42.3199 KLREKRKSGLLSSFS-p Q96L93-2;S566-p KLREKRKSGLLSSFS 0.102728705875057 0.613102716882454 -0.313 0.0943333333333333 20.8798700655744 2.8871673163845 -0.313 0.0943333333333334 0.0081660680264957 0.514379045668976 -4.07037632403011 0.69730425171151 Q96L93 KIF16B Q96L93.2.S566.p_KIF16B Q96L93-2_S566s _1_1_566_566 Q96L93-2 Q96L93-2|Q96L93-4|Q96L93-6|A0A1B0GTU3|Q96L93-5 Isoform 2 of Kinesin-like protein KIF16B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.35516.35516.3 15.91 15.91 2.631 7 1 1 0 737.7166 2131.1721 S566s TMT10 566 (K) sGLLSSFSLSMTDLSK (S) S(0.99)GLLS(0.0)S(0.0)FS(0.0)LS(0.0)MT(0.0)DLS(0.0)K K:TMT10,s:Phosphorylated S KIF16B 160684.4 5 4 774.1 227.33 HUMAN 1 -20.8799 2.8872 KLREQTLSPTITSGL-p D6REX3;S1194-p KLREQTLSPTITSGL 0.752428078179286 0.766392561958155 0.054 0.031 2.35689769442588 1.59604588921466 0.054 0.031 0.581179424487185 0.692461147474864 0.586465243585773 0.41731614604543 D6REX3 NotFound D6REX3.S1194.p_NotFound D6REX3_S1194s _1_1_1194_1194 D6REX3 D6REX3|O94979-8|O94979-2|O94979-9|O94979-4|O94979-10|O94979-3|O94979-6|O94979-7|H7BXG7 Protein transport protein Sec31A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18619.18619.3 14.01 10.19 2.35 5 1 1 0 806.1022 2336.3248 S1194s TMT10 1188 (K) LREQTLsPTITSGLHNIAR (S) LREQT(0.0)LS(0.99)PT(0.0)IT(0.0)S(0.0)GLHNIAR s:Phosphorylated S SEC31A 137193.7 4 7 665.1 250.42 HUMAN 1 2.3569 1.596 KLRGLPVSGTKPDLI-p Q9ULH7-5;S420-p KLRGLPVSGTKPDLI 0.237133599542224 0.0500206993057638 -0.180333333333333 -0.270666666666667 11.9758584872553 17.3908183223155 -0.180333333333333 -0.270666666666667 0.06344744694809 0.0182355206591407 -2.32805328584918 -3.3373941698659 Q9ULH7 MKL2 Q9ULH7.5.S420.p_MKL2 Q9ULH7-5_S420s _1_1_420_420 Q9ULH7-5 Q9ULH7-5|Q9ULH7-4 Isoform 5 of MKL/myocardin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16452.16452.3 8.53 8.53 2.364 2 1 1 0 597.6584 1710.9952 S420s Hydrogen 416 (R) GLPVsGTKPDLIER (L) GLPVS(0.99)GT(0.0)KPDLIER K:TMT10-Lys-Only,s:Phosphorylated S MKL2 119334.1 1 7 464.1 303.55 HUMAN 1 -11.9759 -17.3908 KLRHKKDSLQNQLIN-p Q5VTI5;S611-p KLRHKKDSLQNQLIN 0.900356606703368 0.0496915219721712 -0.024 0.268666666666667 0.892438274884161 17.4374491098957 -0.024 0.268666666666667 0.814247010087009 0.0180407707992585 -0.246675727101325 3.34666446284425 Q5VTI5 NotFound Q5VTI5.S611.p_NotFound Q5VTI5_S611s _1_1_611_611 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18670.18670.3 12.31 12.31 99 1 1 1 0 660.707 1900.138 S611s TMT10 609 (K) KDsLQNQLINIR (V) KDS(1.0)LQNQLINIR K:TMT10,s:Phosphorylated S PLEKHA6 119745.7 2 21 52.1 743.36 HUMAN 1 -0.8924 17.4374 KLRIAQVSPGPRDSP-p Q9NQS7;S263-p KLRIAQVSPGPRDSP 0.790000475046438 0.00205530259496525 0.0433333333333333 -0.968333333333333 1.97603747541823 41.8488176872082 0.0433333333333333 -0.968333333333334 0.634448321075999 6.53308383534209e-05 0.503488804191511 -10.9950175242843 Q9NQS7 INCENP Q9NQS7.S263.p_INCENP Q9NQS7_S263s _1_1_263_263 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17667.17667.3 21.62 21.62 6.44 3 1 1 0 754.0234 2180.0883 S263s Hydrogen 259 (R) IAQVsPGPRDSPAFPDSPWR (E) IAQVS(0.99)PGPRDS(0.0)PAFPDS(0.0)PWR s:Phosphorylated S INCENP 105826.3 16 9 138.1 524.38 HUMAN 1 1.976 -41.8488 KLRIRTPSGEFLERR-p Q9UNN5;S582-p KLRIRTPSGEFLERR 0.203650978120986 0.0978159790989977 -0.43 0.210333333333333 13.3906611579314 13.3490933117549 -0.43 0.210333333333333 0.0458072145767034 0.0462477564003376 -2.58170605441967 2.57270897627528 Q9UNN5 FAF1 Q9UNN5.S582.p_FAF1 Q9UNN5_S582s _1_1_582_582 Q9UNN5 Q9UNN5|Q9UNN5-2 FAS-associated factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14334.14334.3 12.17 12.17 1.627 2 1 1 0 538.614 1533.8587 S582s TMT10 578 (R) IRTPsGEFLER (R) IRT(0.0)PS(0.99)GEFLER s:Phosphorylated S FAF1 74409.3 6 4 2863.1 67.89 HUMAN 1 -13.3907 13.3491 KLRPKRASAEQSVLF-p A0A0J9YWL0;S1193-p KLRPKRASAEQSVLF 0.652883195845465 0.124165409708268 -0.0633333333333333 -0.256 3.47208912387859 11.9520879887251 -0.0633333333333333 -0.256 0.449563545474815 0.063795669743155 -0.814770877463182 -2.32268573398482 A0A0J9YWL0 NotFound A0A0J9YWL0.S1193.p_NotFound A0A0J9YWL0_S1193s _1_1_1193_1193 A0A0J9YWL0 A0A0J9YWL0|Q9Y4K1 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14923.14923.3 8.92 8.92 3.893 2 1 1 0 591.9937 1694.0001 S1193s TMT10 1191 (K) RAsAEQSVLFK (S) RAS(0.99)AEQS(0.0)VLFK K:TMT10,s:Phosphorylated S CRYBG1 233643.7 1 27 79.1 640.71 HUMAN 1 -3.4721 -11.9521 KLRPRNRSAEEGELA-p Q9C0C2;S1666-p KLRPRNRSAEEGELA 0.145152146047681 0.0299002890820564 -0.258333333333333 -0.299333333333333 17.1102733490692 20.6288808083825 -0.258333333333333 -0.299333333333333 0.0194523764266585 0.0086519085266777 -3.28438573176619 -4.01132860961112 Q9C0C2 TNKS1BP1 Q9C0C2.S1666.p_TNKS1BP1 Q9C0C2_S1666s _1_1_1666_1666 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7953.7953.3 16.58 14.38 16.58 2 1 1 0 653.3265 1877.9969 S1666s TMT10 1664 (R) NRsAEEGELAESK (S) NRS(0.99)AEEGELAES(0.0)K K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 7 69 4.1 2105.7 HUMAN 1 -17.1103 -20.6289 KLRRNAHSRLESYRP-p Q8ND76;S21-p KLRRNAHSRLESYRP 0.20228767245005 0.857798428668267 0.195666666666667 -0.0383333333333333 13.4648027598473 0.937804094629265 0.195666666666667 -0.0383333333333333 0.0450318432586269 0.805785764363898 2.59516894191956 -0.258178421756383 Q8ND76 CCNY Q8ND76.S21.p_CCNY Q8ND76_S21s _1_1_21_21 Q8ND76 Q8ND76|Q8ND76-2 Cyclin-Y HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7035.7035.4 14.4 8.1 2.278 5 1 1 0 582.2843 2246.1475 S21s TMT10 18 (R) NAHsRLESYRPDTDLSR (E) NAHS(0.99)RLES(0.0)Y(0.0)RPDT(0.0)DLS(0.0)R s:Phosphorylated S CCNY 39849.4 1 7 1234.1 163.69 HUMAN 1 13.4648 -0.9378 KLRRRTFSLTEVRGQ-p O95239;S801-p KLRRRTFSLTEVRGQ 0.014110712010784 0.00871387031069474 -0.994 -0.932666666666667 44.8877332678747 29.2082783825133 -0.994 -0.932666666666667 3.24508945525254e-05 0.00119997489941691 -12.5983149638051 -6.18534557534583 O95239 KIF4A O95239.S801.p_KIF4A O95239_S801s _1_1_801_801 O95239 O95239|O95239-2 Chromosome-associated kinesin KIF4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19085.19085.2 10.55 4.73 1.105 3 1 1 0 631.3232 1181.6728 S801s TMT10 799 (R) TFsLTEVR (G) T(0.0)FS(0.99)LT(0.0)EVR s:Phosphorylated S KIF4A 141476.1 4 4 516.1 285.41 HUMAN 1 -44.8877 -29.2083 KLRSPRGSPDGSLQT-p Q8IZL8;S481-p KLRSPRGSPDGSLQT 0.790364374480368 0.950466325443676 -0.0573333333333333 -0.00700000000000001 1.97157795193548 0.316571843362346 -0.0573333333333334 -0.00700000000000001 0.635100134636751 0.929699967257404 -0.502498533981312 -0.0923977890691501 Q8IZL8 PELP1 Q8IZL8.S481.p_PELP1 Q8IZL8_S481s _1_1_481_481 Q8IZL8 C9JFV4|Q8IZL8|E7EV54 Proline-, glutamic acid- and leucine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8452.8663.3 17.34 17.34 3.713 4 1 1 0 689.0298 1985.1068 S481s Hydrogen 480 (R) GsPDGSLQTGKPSAPK (K) GS(0.99)PDGS(0.0)LQT(0.0)GKPS(0.0)APK K:TMT10-Lys-Only,s:Phosphorylated S PELP1 120952.6 7 4 911.1 201.81 HUMAN 1 -1.9716 -0.3166 KLRSRSLSQIHEAAV-p Q9NZM1;S731-p KLRSRSLSQIHEAAV 0.652911308934577 0.896916293211812 0.063 -0.013 3.47032773471504 0.662909877108001 0.063 -0.013 0.449745914118799 0.858438154635935 0.814424139148963 -0.187027737093071 Q9NZM1 MYOF Q9NZM1.S731.p_MYOF Q9NZM1_S731s _1_1_731_731 Q9NZM1 Q9NZM1|Q9NZM1-3|Q9NZM1-6|Q9NZM1-2|Q9NZM1-5 Myoferlin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11661.12015.2 15.2 8.41 2.857 2 1 1 0 760.3959 1439.8168 S731s TMT10 729 (R) SLsQIHEAAVR (M) S(0.0)LS(0.99)QIHEAAVR s:Phosphorylated S MYOF 236244.8 5 6 829.1 216.58 HUMAN 1 3.4703 -0.6629 KLRSWSRSIEDLQPP-p Q8IVF7;S174-p KLRSWSRSIEDLQPP 0.476173375403983 0.697039615659779 0.115333333333333 0.0483333333333333 5.93171472491371 2.15465797272558 0.115333333333333 0.0483333333333333 0.255169361854462 0.608883496304414 1.27238956838193 0.542721289932771 Q8IVF7 FMNL3 Q8IVF7.S174.p_FMNL3 Q8IVF7_S174s _1_1_174_174 Q8IVF7 Q8IVF7|Q8IVF7-3|F8W1F5 Formin-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30504.30504.3 15.28 15.28 9.696 5 1 1 0 841.763 2443.303 S174s TMT10 174 (R) sIEDLQPPSALSAPFTNSLAR (S) S(0.99)IEDLQPPS(0.0)ALS(0.0)APFT(0.0)NS(0.0)LAR s:Phosphorylated S FMNL3 118123.6 1 1 5291.1 20.93 HUMAN 1 5.9317 2.1547 KLSDDFDSPVKGPLC-p Q96T23;S397-p KLSDDFDSPVKGPLC 0.134738301810513 0.00172005316210418 0.703 -1.985 17.8600386604896 43.810176950645 0.703 -1.985 0.0163680195070471 4.15893664814402e-05 3.43399504261086 -11.9854173324796 Q96T23 RSF1 Q96T23.S397.p_RSF1 Q96T23_S397s _1_1_397_397 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21812.21812.4 19.76 19.76 5.582 2 1 1 0 612.0739 2365.304 S397s TMT10 391 (K) LSDDFDsPVKGPLCK (S) LS(0.0)DDFDS(0.99)PVKGPLCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RSF1 165358.1 9 2 39.1 857.38 HUMAN 1 17.86 -43.8102 KLSHDAESEREDPAP-p Q92766;S180-p KLSHDAESEREDPAP 0.704371473235441 0.775126905193515 0.056 -0.0283333333333333 2.86189946869867 1.52946237355511 0.056 -0.0283333333333333 0.517380496355227 0.703159360747773 0.69222017442859 -0.401835780550549 Q92766 RREB1 Q92766.S180.p_RREB1 Q92766_S180s _1_1_180_180 Q92766 Q92766-2|Q92766-3|Q92766-5|Q92766-6 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5726.5726.5 8.21 8.21 1.954 2 1 1 0 561.501 2723.5044 S180s TMT10 172 (K) RKLSHDAEsEREDPAPAK (K) RKLS(0.0)HDAES(0.99)EREDPAPAK K:TMT10,s:Phosphorylated S RREB1 184269.8 1 11 179.1 480.48 HUMAN 1 2.8619 -1.5295 KLSKIPSTPKLIPKV-p B5MBZ0;T201-p KLSKIPSTPKLIPKV 0.106447952251166 0.202705281733915 0.309666666666667 0.154666666666667 20.4849191385703 9.11874107079172 0.309666666666667 0.154666666666667 0.0089435118373108 0.122497124144084 3.98380076401735 1.82825241928575 B5MBZ0 EML4 B5MBZ0.T201.p_EML4 B5MBZ0_S200sT201t_2_2_200_201 B5MBZ0 B5MBZ0|Q9HC35|Q9HC35-2 Echinoderm microtubule-associated protein-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23200.23200.4 8.67 8.67 3.867 3 2 2 0 625.379 2338.5607 S200s T201t TMT10 195 (K) LSKIPstPKLIPK (V) LS(0.0)KIPS(0.99)T(0.99)PKLIPK K:TMT10,s:Phosphorylated S,t:Phosphorylated T EML4 111259.7 3 14 586.1 265.11 HUMAN 1 20.4849 9.1187 KLSPGLGSPISGLSK-p E5RH04;S145-p KLSPGLGSPISGLSK 0.678718870744885 0.647802270425333 0.077 -0.059 3.15038500301479 2.57073548344273 0.077 -0.0589999999999999 0.484129447499535 0.553256406578246 0.750795123603233 -0.631707161941661 E5RH04 NotFound E5RH04.S145.p_NotFound E5RH04_S145s _1_1_145_145 E5RH04 Q8N2R0-3|E5RH04|Q8N2R0-2 Protein odd-skipped-related 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24412.24412.3 9.07 9.07 3.01 4 1 1 0 617.686 1771.073 S145s TMT10 139 (K) LSPGLGsPISGLSK (L) LS(0.0)PGLGS(0.99)PIS(0.0)GLS(0.0)K K:TMT10,s:Phosphorylated S OSR2 33115.6 1 1 6005.1 14.72 HUMAN 1 3.1504 -2.5707 KLSRRSISSPNVNRL-p Q9NQT8;S1381-p KLSRRSISSPNVNRL 0.761075965165946 0.961764534320745 0.0443333333333333 0.00233333333333337 2.2761320883312 0.241848390790498 0.0443333333333333 0.00592618065272959 0.592088725230631 0.94583452122575 0.56912082951922 0.0711428359339723 Q9NQT8 KIF13B Q9NQT8.S1381.p_KIF13B Q9NQT8_S1381s _1_1_1381_1381 Q9NQT8 Q9NQT8 Kinesin-like protein KIF13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7515.7515.2 13.26 13.26 1.105 3 1 1 0 641.8223 1202.6691 S1381s TMT10 1379 (R) SIsSPNVNR (L) S(0.0)IS(0.99)S(0.0)PNVNR s:Phosphorylated S KIF13B 204097.3 5 7 335.1 355.82 HUMAN 1 2.2761 0.2418 KLSSDENSNPDLSGD-p O75530-2;S29-p KLSSDENSNPDLSGD 0.148266672319898 0.142961569914426 0.257 0.201666666666667 16.772726716996 11.1324662032464 0.257 0.201666666666667 0.021024579974763 0.0770465824791635 3.21800440784183 2.17833694412244 O75530 EED O75530.2.S29.p_EED O75530-2_S29sS34sT55t_3_3_29_55 O75530-2 O75530-2|O75530-3|E9PJK2 Isoform 2 of Polycomb protein EED HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17148.17148.5 22.62 22.62 1.114 11 3 3 0 1063.464 5072.3841 S29s S34s N38n T55t TMT10 23 (K) LSSDENsNPDLsGDEnDDAVSIESGTNTERPDtPTNTPNAPGRK (S) LS(0.0)S(0.0)DEN(0.0)S(0.99)N(0.0)PDLS(0.99)GDEN(0.99)DDAVS(0.0)IES(0.0)GT(0.0)N(0.0)T(0.0)ERPDT(0.99)PT(0.0)N(0.0)T(0.0)PN(0.0)APGRK K:TMT10,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T EED 53858.8 6 3 1998.1 103.39 HUMAN 1 16.7727 11.1325 KLSSERPSSDGEGVV-p Q8N556-2;S282-p KLSSERPSSDGEGVV 0.108078410418423 0.0104208653247273 -0.411333333333333 -0.413 20.3288473358359 27.8247725303171 -0.411333333333333 -0.413 0.0092707584660851 0.00165014742854832 -3.94988266942493 -5.78834240454444 Q8N556 AFAP1 Q8N556.2.S282.p_AFAP1 Q8N556-2_S282sS283s_2_2_282_283 Q8N556-2 Q8N556-2 Isoform 2 of Actin filament-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14662.14662.4 12.05 12.05 1.351 6 2 2 0 867.9243 3308.7359 S282s S283s TMT10 275 (K) KLSSERPssDGEGVVENGITTCNGK (E) KLS(0.0)S(0.0)ERPS(0.99)S(0.99)DGEGVVENGIT(0.0)T(0.0)CNGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S AFAP1 90706.1 2 9 854.1 211.2 HUMAN 1 -20.3288 -27.8248 KLSTFRESFKKRVIG-p P23497-4;S394-p KLSTFRESFKKRVIG 0.909465039529785 0.0439711539603473 0.0323333333333333 0.252333333333333 0.8090064366615 18.1701315741843 0.0323333333333333 0.252333333333333 0.83004063951481 0.0152400658167936 0.225258783083406 3.49388431317485 P23497 SP100 P23497.4.S394.p_SP100 P23497-4_S394s _1_1_394_394 P23497-4 P23497-4 Isoform Sp100-C of Nuclear autoantigen Sp-100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15365.15365.4 8.97 8.97 8.967 3 1 1 0 503.2905 1930.1729 S394s TMT10 388 (K) LSTFREsFKK (R) LS(0.0)T(0.0)FRES(0.99)FKK K:TMT10,s:Phosphorylated S SP100 103285 2 9 542.1 276.37 HUMAN 1 0.809 18.1701 KLSTRNRTPAKVEDA-p P46013;T401-p KLSTRNRTPAKVEDA 0.137325721125408 0.013271733212951 -0.251666666666667 -0.775 17.6721769345262 26.1124821588202 -0.251666666666667 -0.775 0.0170915837154116 0.0024476639085971 -3.39622148206289 -5.32413160180479 P46013 MKI67 P46013.T401.p_MKI67 P46013_T401t _1_1_401_401 P46013 P46013 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12007.12007.5 10.79 10.79 10.793 5 1 1 0 685.9728 3345.8784 T401t TMT10 399 (R) NRtPAKVEDAADSATKPENLSSK (T) NRT(0.99)PAKVEDAADS(0.0)AT(0.0)KPENLS(0.0)S(0.0)K K:TMT10,t:Phosphorylated T MKI67 360912.4 2 7 5.1 1918.46 HUMAN 1 -17.6722 -26.1125 KLTIQMMSPLQIERS-p Q8WUJ0;S184-p KLTIQMMSPLQIERS 0.774853463670336 0.238570539150896 0.0416666666666667 -0.206666666666667 2.12200018427843 8.19877520960625 0.0416666666666667 -0.206666666666667 0.613479396357169 0.151398816076908 0.535653493597031 -1.66908333403113 Q8WUJ0 STYX Q8WUJ0.S184.p_STYX Q8WUJ0_S184s _1_1_184_184 Q8WUJ0 Q8WUJ0 Serine/threonine/tyrosine-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29242.29242.3 15.65 15.65 7.388 2 1 1 0 623.6587 1788.9913 S184s TMT10 178 (K) LTIQMMsPLQIER (S) LT(0.0)IQMMS(0.99)PLQIER s:Phosphorylated S STYX 25663.1 3 1 4806.1 26.39 HUMAN 1 2.122 -8.1988 KLTPIVHSPLRYQSD-p Q96KQ4;S681-p KLTPIVHSPLRYQSD 0.130013664511896 0.0132532373363893 -0.523333333333333 -0.398333333333333 18.324319590722 26.1279498387368 -0.523333333333334 -0.398333333333333 0.014708488352795 0.0024389619002669 -3.52820123427344 -5.32819756913971 Q96KQ4 PPP1R13B Q96KQ4.S681.p_PPP1R13B Q96KQ4_S681s _1_1_681_681 Q96KQ4 Q96KQ4 Apoptosis-stimulating of p53 protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21505.21505.3 13.15 13.15 1.678 4 1 1 0 901.8018 2623.4405 S681s TMT10 675 (K) LTPIVHsPLRYQSDADLEALR (R) LT(0.0)PIVHS(0.99)PLRY(0.0)QS(0.0)DADLEALR s:Phosphorylated S PPP1R13B 120133.8 2 9 1161.1 171.12 HUMAN 1 -18.3243 -26.1279 KLTPVPDSFFAKHLQ-p O94906;S185-p KLTPVPDSFFAKHLQ 0.271934050035616 0.609819678281077 0.173333333333333 0.057 10.7126506105426 2.91808510733369 0.173333333333333 0.057 0.0848662356552562 0.510730141639999 2.10584094700183 0.703627560124434 O94906 PRPF6 O94906.S185.p_PRPF6 O94906_S185s _1_1_185_185 O94906 O94906|O94906-2 Pre-mRNA-processing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28979.28979.3 8.96 7.89 4.214 2 1 1 0 587.32 1679.9773 S185s TMT10 179 (K) LTPVPDsFFAK (H) LT(0.0)PVPDS(0.99)FFAK K:TMT10,s:Phosphorylated S PRPF6 107721.8 1 2 1650.1 123.56 HUMAN 1 10.7127 2.9181 KLTRPAASPAVGEKL-p A0A0A0MQS2;S547-p KLTRPAASPAVGEKL 0.500572386553147 0.522662769450901 0.105 -0.0806666666666667 5.53991417320591 3.78534847837253 0.105 -0.0806666666666666 0.27925990290105 0.418278124621949 1.20214482623065 -0.875727211713666 A0A0A0MQS2 CLASRP A0A0A0MQS2.S547.p_CLASRP A0A0A0MQS2_S547s _1_1_547_547 A0A0A0MQS2 Q8N2M8|A0A0A0MQS2|F5H0Q6|Q8N2M8-4|Q8N2M8-3 CLK4-associating serine/arginine-rich protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10781.10781.3 13.74 6.78 4.283 2 1 1 0 612.3439 1755.0529 S547s TMT10 541 (K) LTRPAAsPAVGEK (L) LT(0.0)RPAAS(0.99)PAVGEK K:TMT10,s:Phosphorylated S CLASRP 77332.1 6 9 1177.1 169.72 HUMAN 1 5.5399 -3.7853 KLVEQANSPKHQWGE-p O95391;S215-p KLVEQANSPKHQWGE 0.191011115230049 0.0263581786161247 -0.568 0.345333333333333 14.0596950030421 21.4575351200071 -0.568 0.345333333333333 0.0392672511093292 0.00714901960419317 -2.70388518720379 4.19467615189801 O95391 SLU7 O95391.S215.p_SLU7 O95391_S215s _1_1_215_215 O95391 O95391 Pre-mRNA-splicing factor SLU7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14624.14624.4 22.51 22.51 10.102 2 1 1 0 866.4304 3382.7305 S215s TMT10 209 (K) LVEQANsPKHQWGEEEPNSQMEK (D) LVEQANS(0.99)PKHQWGEEEPNS(0.0)QMEK K:TMT10,s:Phosphorylated S SLU7 68841.9 16 2 1408.1 145.68 HUMAN 1 -14.0597 21.4575 KLVGDTVSYSKKRLR-p Q08357;S422-p KLVGDTVSYSKKRLR 0.0387399959516092 0.00515478121615231 -0.538 -0.626333333333333 32.0604303965369 33.2847814245952 -0.538 -0.626333333333334 0.000622238616732737 0.000469377056928763 -7.08434786085118 -7.48361285732433 Q08357 SLC20A2 Q08357.S422.p_SLC20A2 Q08357_S422s _1_1_422_422 Q08357 Q08357 Sodium-dependent phosphate transporter 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17566.17566.2 11.27 11.27 2.261 4 1 1 0 803.9288 1526.883 S422s TMT10 416 (K) LVGDTVsYSK (K) LVGDT(0.0)VS(0.99)Y(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SLC20A2 70904.6 2 5 2608.1 76.8 HUMAN 1 -32.0604 -33.2848 KLVGLNLSPPMSPVQ-p Q8N0Z3;S760-p KLVGLNLSPPMSPVQ 0.500373865046061 0.0567818538495454 -0.089 -0.287666666666667 5.54394807449266 16.6014970678708 -0.089 -0.287666666666667 0.27900063553337 0.0218700760488386 -1.20287172513562 -3.18219901792675 Q8N0Z3 SPICE1 Q8N0Z3.S760.p_SPICE1 Q8N0Z3_S760s _1_1_760_760 Q8N0Z3 Q8N0Z3 Spindle and centriole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36248.36248.2 18.51 18.51 1.963 2 1 1 0 1120.6244 2160.2776 S760s TMT10 754 (K) LVGLNLsPPMSPVQLPLR (A) LVGLNLS(0.99)PPMS(0.0)PVQLPLR s:Phosphorylated S SPICE1 96605.1 11 10 556.1 273.19 HUMAN 1 -5.5439 -16.6015 KLVGVRESVLPEDAI-p Q70J99-3;S784-p KLVGVRESVLPEDAI 0.0286450822452032 0.416998133345667 -0.727666666666667 -0.108 36.0987262142963 5.05208460810147 -0.727666666666667 -0.108 0.000245542898739675 0.312457921298794 -8.52483749030035 -1.11336736372331 Q70J99 UNC13D Q70J99.3.S784.p_UNC13D Q70J99-3_S784s _1_1_784_784 Q70J99-3 Q70J99-3 Isoform 3 of Protein unc-13 homolog D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.33953.33961.3 14.92 14.92 99 1 1 1 0 873.1666 2537.5141 S784s TMT10 778 (K) LVGVREsVLPEDAILPLMK (F) LVGVRES(1.0)VLPEDAILPLMK K:TMT10,s:Phosphorylated S UNC13D 129958.1 2 2 2704.1 73.39 HUMAN 1 -36.0987 -5.0521 KLVLLGESAVGKSSL-p P51148-2;S63-p KLVLLGESAVGKSSL 0.795842244766724 0.349998384616026 -0.0423333333333333 0.096 1.91696415874674 6.04537916208696 -0.0423333333333334 0.096 0.643137131265792 0.248577653329606 -0.490333611015213 1.29233387162456 P51148 RAB5C P51148.2.S63.p_RAB5C P51148-2_S63s _1_1_63_63 P51148-2 P51148-2|P20339|P61020|P20339-2|P61020-2|K7ERI8|F8VPW9|F8WD79 Isoform 2 of Ras-related protein Rab-5C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27196.27196.3 11.48 5.68 99 1 1 1 0 541.9873 1543.9824 S63s TMT10 57 (K) LVLLGEsAVGK (S) LVLLGES(1.0)AVGK K:TMT10,s:Phosphorylated S RAB5C 27263.3 2 2 2563.1 78.41 HUMAN 1 -1.917 6.0454 KLVLPSNTPNVRRTK-p Q03188;T734-p KLVLPSNTPNVRRTK 0.223892436900245 0.0842923711703691 0.193333333333333 -0.263 12.4856462549852 14.220870106174 0.193333333333333 -0.263 0.0564202978473653 0.0378366771585834 2.41878291689026 -2.73189124853445 Q03188 CENPC Q03188.T734.p_CENPC Q03188_T734t _1_1_734_734 Q03188 Q03188 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14008.14008.3 11.35 11.35 1.66 2 1 1 0 558.9807 1594.959 T734t TMT10 728 (K) LVLPSNtPNVRR (T) LVLPS(0.0)NT(0.99)PNVRR t:Phosphorylated T CENPC 107459.5 1 21 209.1 442.77 HUMAN 1 12.4856 -14.2209 KLVNTTITPEPEPKP-p Q86V48;T679-p KLVNTTITPEPEPKP 0.935958298123298 0.0194547156560041 0.0123333333333333 -0.425666666666667 0.563868700497662 23.4977173201169 0.0123333333333333 -0.425666666666667 0.878239831170122 0.00446918433647436 0.16059198797141 -4.66770817052471 Q86V48 LUZP1 Q86V48.T679.p_LUZP1 Q86V48_T679t _1_1_679_679 Q86V48 Q86V48|Q86V48-3|Q86V48-2 Leucine zipper protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15885.15885.3 14.53 8.25 1.179 4 1 1 0 886.141 2576.4448 T679t TMT10 673 (K) LVNTTItPEPEPKPQPNSR (E) LVNT(0.0)T(0.0)IT(0.99)PEPEPKPQPNS(0.0)R K:TMT10,t:Phosphorylated T LUZP1 120843.3 4 11 507.1 289.34 HUMAN 1 0.5639 -23.4977 KLVQRINSIYNAKRG-p P78524;S622-p KLVQRINSIYNAKRG 0.250689107676978 0.0212539928964931 -0.22 -0.419 11.4639682261172 22.8762661156375 -0.22 -0.419 0.0713843776211306 0.00515671807343438 -2.23760197491213 -4.52021019925453 P78524 ST5 P78524.S622.p_ST5 P78524_S622s _1_1_622_622 P78524 P78524|P78524-2|B4DDL8|P78524-3|E9PJC3 Suppression of tumorigenicity 5 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17722.17722.2 10.51 3.79 6.577 2 1 1 0 730.9004 1380.8251 S622s TMT10 620 (R) INsIYNAK (R) INS(0.99)IY(0.0)NAK K:TMT10,s:Phosphorylated S ST5 127680.5 1 5 2234.1 92.43 HUMAN 1 -11.464 -22.8763 KLYRLPETPKTAGLR-p P30419;T332-p KLYRLPETPKTAGLR 0.349971497199092 0.0829027332218913 -0.562 0.295666666666667 8.46951588931877 14.3176954750905 -0.562 0.295666666666667 0.142248734380856 0.0370024476176613 -1.71652788844916 2.74974168839338 P30419 NMT1 P30419.T332.p_NMT1 P30419_Y327yT332t_2_2_327_332 P30419 P30419|P30419-2 Glycylpeptide N-tetradecanoyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.4061.4061.3 10.6 10.6 99 2 2 2 0 578.9726 1574.967 Y327y T332t TMT10 326 (K) LyRLPEtPK (T) LY(1.0)RLPET(1.0)PK K:TMT10,y:Phosphorylated Y,t:Phosphorylated T NMT1 57147.5 2 6 1576.1 130.17 HUMAN 1 -8.4695 14.3177 KMAASRRSVFALSNE-p Q8NEV8;S1201-p KMAASRRSVFALSNE 0.51636083436218 0.690559201233539 -0.099 -0.0433333333333333 5.29925812046678 2.20454416397674 -0.099 -0.0433333333333333 0.295171340731571 0.601929438172062 -1.15862687073934 -0.553571235945616 Q8NEV8 EXPH5 Q8NEV8.S1201.p_EXPH5 Q8NEV8_S1201s _1_1_1201_1201 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.32760.32760.3 10 10 4.187 4 1 1 0 907.7878 2641.3584 S1201s TMT10 1201 (R) sVFALSNEDPLPFCSDLSGK (E) S(0.99)VFALS(0.0)NEDPLPFCS(0.0)DLS(0.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EXPH5 223884.5 1 17 129.1 537.25 HUMAN 1 -5.2993 -2.2045 KMASAPASYGSTTTK-p Q8WVM8;S508-p KMASAPASYGSTTTK 0.789946815781071 0.32007132621705 -0.0456666666666667 -0.101666666666667 1.97747279594985 6.54466122857385 -0.0456666666666667 -0.101666666666667 0.634238673872161 0.221581693437955 -0.503807430255273 -1.38069178745947 Q8WVM8 SCFD1 Q8WVM8.S508.p_SCFD1 Q8WVM8_S508s _1_1_508_508 Q8WVM8 Q8WVM8|Q8WVM8-3|Q8WVM8-2 Sec1 family domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20643.20643.3 12.79 9.23 2.414 8 1 1 0 889.1226 2585.3832 S508s TMT10 502 (K) MASAPAsYGSTTTKPMGLLSR (V) MAS(0.0)APAS(0.99)Y(0.0)GS(0.0)T(0.0)T(0.0)T(0.0)KPMGLLS(0.0)R K:TMT10,s:Phosphorylated S SCFD1 72720.9 1 5 3082.1 61.22 HUMAN 1 -1.9775 -6.5447 KMCDFGISGYLVDSV-p P52564;S201-p KMCDFGISGYLVDSV 0.998180995519267 0.0106397962711193 -0.000333333333333331 0.442666666666667 0.0138584805409381 27.6676526742521 -0.00033333333333333 0.442666666666667 0.996814052864284 0.00171093981404158 -0.00418075419053339 5.74452823537118 P52564 MAP2K6 P52564.S201.p_MAP2K6 P52564_S201s _1_1_201_201 P52564 P46734-3|P52564 Dual specificity mitogen-activated protein kinase kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.34364.34364.3 14.53 12.6 3.551 3 1 1 0 767.3746 2220.1445 S201s TMT10 195 (K) MCDFGIsGYLVDSVAK (T) MCDFGIS(0.99)GY(0.0)LVDS(0.0)VAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP2K6 37834 1 2 4251.1 34.67 HUMAN 1 -0.0139 27.6677 KMDLPGVSIADEGET-p Q8IY81;S411-p KMDLPGVSIADEGET 0.306986126472047 0.0499722467783669 0.143333333333333 0.324666666666667 9.59021243437316 17.3965147171928 0.143333333333333 0.324666666666667 0.109895208307216 0.0182116178383686 1.9105956656934 3.33852600090939 Q8IY81 FTSJ3 Q8IY81.S411.p_FTSJ3 Q8IY81_S411s _1_1_411_411 Q8IY81 Q8IY81 pre-rRNA processing protein FTSJ3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.36638.36638.3 20.11 20.11 4.688 5 1 1 0 912.4324 2655.3207 S411s TMT10 405 (K) MDLPGVsIADEGETGMFSLSTIR (G) MDLPGVS(0.99)IADEGET(0.0)GMFS(0.0)LS(0.0)T(0.0)IR s:Phosphorylated S FTSJ3 96956.1 3 1 631.1 257.01 HUMAN 1 9.5902 17.3965 KMESSFGSPSKQESS-p Q6VMQ6-4;S485-p KMESSFGSPSKQESS 0.146032110811787 0.204738508112884 -0.339333333333333 0.131333333333333 17.0179379992715 9.06225674103682 -0.339333333333333 0.131333333333333 0.0198703812564308 0.124100727065802 -3.26616868153156 1.81848139945956 Q6VMQ6 ATF7IP Q6VMQ6.4.S485.p_ATF7IP Q6VMQ6-4_S485s _1_1_485_485 Q6VMQ6-4 Q6VMQ6-4|Q6VMQ6-5|Q6VMQ6-2 Isoform 3 of Activating transcription factor 7-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13621.13621.3 10.59 10.59 3.206 4 1 1 0 532.2581 1514.7925 S485s TMT10 479 (K) MESSFGsPSK (Q) MES(0.0)S(0.0)FGS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S ATF7IP 138346.3 13 7 273.1 392.91 HUMAN 1 -17.0179 9.0623 KMEVEELSPLALGRF-p P30305;S249-p KMEVEELSPLALGRF 0.10854647135141 0.00164640726975777 -0.509 -0.933666666666667 20.214635414784 44.3341614668717 -0.509 -0.933666666666667 0.00951779745572761 3.68624208718498e-05 -3.92516559649481 -12.2637794925342 P30305 CDC25B P30305.S249.p_CDC25B P30305_S249s _1_1_249_249 P30305 P30305-4|P30305-2 M-phase inducer phosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22568.22568.3 9.48 9.48 99 1 1 1 0 704.0501 2030.172 S249s TMT10 242 (R) KMEVEELsPLALGR (F) KMEVEELS(1.0)PLALGR K:TMT10,s:Phosphorylated S CDC25B 65671 1 9 563.1 271.52 HUMAN 1 -20.2146 -44.3342 KMFKDKVSPLQNLAS-p Q03112-3;S624-p KMFKDKVSPLQNLAS 0.357290119673935 0.119456603347846 -0.151666666666667 -0.223333333333333 8.30557325890079 12.1695217002176 -0.151666666666667 -0.223333333333333 0.147721148014323 0.0606803154714639 -1.68813217989678 -2.36124177036851 Q03112 MECOM Q03112.3.S624.p_MECOM Q03112-3_S624s _1_1_624_624 Q03112-3 Q03112-3|E7EQ57|Q03112-4|A0A0C3SFZ7|Q03112-6 Isoform 2 of MDS1 and EVI1 complex locus protein EVI1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20047.20047.5 12.62 12.62 12.621 2 1 1 0 553.9283 2685.6433 S624s TMT10 621 (K) DKVsPLQNLASINNKK (E) DKVS(0.99)PLQNLAS(0.0)INNKK K:TMT10,s:Phosphorylated S MECOM 141074 3 4 937.1 198.37 HUMAN 1 -8.3056 -12.1695 KMGNLQNSPVNMNPP-p Q15596;S565-p KMGNLQNSPVNMNPP 0.525094535747024 0.0257729799287224 0.102333333333333 0.354333333333333 5.17762658197809 21.6087075202528 0.102333333333333 0.354333333333333 0.303554965793955 0.00690445252854019 1.1365117063822 4.22865021416739 Q15596 NCOA2 Q15596.S565.p_NCOA2 Q15596_S565s_1_1_565_565 Q15596 Q15596|E7EWM1 Nuclear receptor coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18239.18239.4 19.97 15.27 11.832 2 1 1 0 623.8173 2396.283 S565s M569m TMT10 559 (K) MGNLQNsPVNmNPPPLSK (M) M(0.0)GNLQNS(0.99)PVNM(0.99)NPPPLS(0.0)K K:TMT10,s:Phosphorylated S,m:Oxidized methionine NCOA2 160009.7 12 7 290.1 381.81 HUMAN 1 5.1776 21.6087 KMGNTVESEHLSELT-p Q9Y2E8-2;S519-p KMGNTVESEHLSELT 0.832987870919974 0.0235819629746551 0.039 0.362 1.53104702385794 22.1916253046128 0.039 0.362 0.702902839313671 0.00603722649798037 0.402248637739137 4.3612234755506 Q9Y2E8 SLC9A8 Q9Y2E8.2.S519.p_SLC9A8 Q9Y2E8-2_S519sS523sT526t_3_3_519_526 Q9Y2E8-2 Q9Y2E8-2 Isoform 2 of Sodium/hydrogen exchanger 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22324.22324.4 12.39 12.39 1.201 6 3 3 0 834.5928 3095.4465 S519s S523s T526t TMT10 513 (K) MGNTVEsEHLsELtEEEYEAHYIR (R) MGNT(0.0)VES(0.99)EHLS(0.99)ELT(0.99)EEEY(0.0)EAHY(0.0)IR s:Phosphorylated S,t:Phosphorylated T SLC9A8 67673.2 1 2 4249.1 34.7 HUMAN 1 1.531 22.1916 KMIKKTQSFEIPQPD-p A0A1B0GW72;S1085-p KMIKKTQSFEIPQPD 0.582439337697198 0.897312937655289 -0.0836666666666667 0.0136666666666667 4.32183945709331 0.659317753769161 -0.0836666666666667 0.0136666666666667 0.369671571982996 0.859148477116619 -0.978170964749082 0.186076359789689 A0A1B0GW72 NotFound A0A1B0GW72.S1085.p_NotFound A0A1B0GW72_S1085s _1_1_1085_1085 A0A1B0GW72 A0A1B0GW72|Q96PX9 Pleckstrin homology domain-containing family G member 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17359.17359.2 15.32 15.32 2.697 3 1 1 0 934.444 1787.9125 S1085s TMT10 1083 (K) TQsFEIPQPDSGPR (D) T(0.0)QS(0.99)FEIPQPDS(0.0)GPR s:Phosphorylated S PLEKHG4B 181102.6 5 8 1118.1 175.42 HUMAN 1 -4.3218 0.6593 KMINTDLSRILKSPE-p P36578;S290-p KMINTDLSRILKSPE 0.315523556306329 0.393159368574386 -0.195333333333333 -0.114666666666667 9.37621053888662 5.38905941628753 -0.195333333333333 -0.114666666666667 0.115446014921836 0.289130600610844 -1.87350884322353 -1.17464818735786 P36578 RPL4 P36578.S290.p_RPL4 P36578_S290s _1_1_290_290 P36578 P36578|H3BM89 60S ribosomal protein L4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14068.14068.2 11.05 5.87 2.779 2 1 1 0 629.8073 1178.6401 S290s TMT10 284 (K) MINTDLsR (I) MINT(0.0)DLS(0.99)R s:Phosphorylated S RPL4 47981.8 1 3 2767.1 71.26 HUMAN 1 -9.3762 -5.3891 KMKAHTMTDDVTFWK-p Q00610-2;T105-p KMKAHTMTDDVTFWK 0.533585059993264 0.0278576052672457 -0.123666666666667 0.322333333333333 5.0504529331844 21.0726091048169 -0.123666666666667 0.322333333333333 0.312575335993058 0.00781158368183036 -1.11329589569192 4.10890838882405 Q00610 CLTC Q00610.2.T105.p_CLTC Q00610-2_T105t _1_1_105_105 Q00610-2 A0A087WVQ6|Q00610|Q00610-2 Isoform 2 of Clathrin heavy chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21267.21267.3 15.71 12.91 2.712 3 1 1 0 663.9899 1909.9882 T105t TMT10 101 (K) AHTMtDDVTFWK (W) AHT(0.0)MT(0.99)DDVT(0.0)FWK K:TMT10,t:Phosphorylated T CLTC 189655.7 1 2 1116.1 175.54 HUMAN 1 -5.0505 21.0726 KMKMPKFSMPGFKAE-p Q09666;S886-p KMKMPKFSMPGFKAE 0.656775474410751 0.0245137008897857 -0.117333333333333 0.393666666666667 3.42611334544105 21.9264526348764 -0.117333333333333 0.393666666666667 0.454348046857471 0.00641733537583447 -0.805708028581345 4.30060297721736 Q09666 AHNAK Q09666.S886.p_AHNAK Q09666_S886s _1_1_886_886 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28799.28799.4 14.27 10.5 99 1 1 1 0 708.1283 2749.5202 S886s TMT10 885 (K) FsMPGFKAEGPEVDVNLPK (A) FS(1.0)MPGFKAEGPEVDVNLPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 40 1.1 4313.36 HUMAN 1 -3.4261 21.9265 KMKMPKFSMPGFKGE-p Q09666;S2252-p KMKMPKFSMPGFKGE 0.786207353619462 0.0481637352059266 -0.082 0.327666666666667 2.0158982368321 17.6155206334184 -0.082 0.327666666666667 0.628651818706374 0.0173160143345125 -0.512319947023663 3.38217311522366 Q09666 AHNAK Q09666.S2252.p_AHNAK Q09666_S2252s _1_1_2252_2252 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28428.28428.4 15.47 8.16 99 1 1 1 0 704.6244 2735.5045 S2252s TMT10 2251 (K) FsMPGFKGEGPEVDVNLPK (A) FS(1.0)MPGFKGEGPEVDVNLPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 66 1.1 4313.36 HUMAN 1 -2.0159 17.6155 KMKNKPRSPVVELSK-p P25098;S670-p KMKNKPRSPVVELSK 0.794385697846618 0.0640750290218265 -0.0543333333333334 0.292666666666667 1.9295760929152 15.8844080279974 -0.0543333333333334 0.292666666666667 0.641272166960982 0.0257964056247513 -0.493149056525776 3.04389516714892 P25098 ADRBK1 P25098.S670.p_ADRBK1 P25098_S670s _1_1_670_670 P25098 P25098 Beta-adrenergic receptor kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17120.17120.5 16.42 16.42 16.415 2 1 1 0 563.5409 2733.707 S670s TMT10 666 (K) NKPRsPVVELSKVPLVQR (G) NKPRS(0.99)PVVELS(0.0)KVPLVQR K:TMT10,s:Phosphorylated S GRK2 80371 11 1 3381.1 52.37 HUMAN 1 -1.9296 15.8844 KMLETKWSLLQQQKT-p P05787;S124-p KMLETKWSLLQQQKT 0.28816497283467 0.064075296053796 -0.219666666666667 0.407666666666667 10.1909141439821 15.8830433488845 -0.219666666666667 0.407666666666667 0.0956992613262943 0.0258045128766317 -2.01489915779368 3.04363428628953 P05787 KRT8 P05787.S124.p_KRT8 P05787_S124s _1_1_124_124 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25781.25781.3 12.88 12.88 2.627 2 1 1 0 800.7807 2320.3666 S124s TMT10 118 (K) MLETKWsLLQQQK (T) MLET(0.0)KWS(0.99)LLQQQK K:TMT10,s:Phosphorylated S KRT8 53703.3 5 18 69.1 672.47 HUMAN 1 -10.1909 15.883 KMLGQKATPPPSPLL-p Q9H0E9-2;T264-p KMLGQKATPPPSPLL 0.60720261825697 0.337241922749368 -0.0796666666666667 0.114666666666667 4.00920865333066 6.25447427513413 -0.0796666666666667 0.114666666666667 0.397263930045537 0.236893187984792 -0.918889441954008 1.3294432016528 Q9H0E9 BRD8 Q9H0E9.2.T264.p_BRD8 Q9H0E9-2_T264t _1_1_264_264 Q9H0E9-2 Q9H0E9-2|Q9H0E9-4|Q9H0E9-3 Isoform 2 of Bromodomain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30136.30136.3 20.18 15.61 6.715 3 1 1 0 786.8064 2278.4353 T264t TMT10 263 (K) AtPPPSPLLSELLKK (G) AT(0.99)PPPS(0.0)PLLS(0.0)ELLKK K:TMT10,t:Phosphorylated T BRD8 103294.1 17 2 654.1 253.82 HUMAN 1 -4.0092 6.2545 KMLISAASPDIRDRE-p Q96AV8;S95-p KMLISAASPDIRDRE 0.846016799825059 0.00165401543705715 -0.036 -1.36733333333333 1.40503062793728 44.2048313899487 -0.036 -1.36733333333333 0.723597299205778 3.79766682708482e-05 -0.372602116818339 -12.1945153715102 Q96AV8 E2F7 Q96AV8.S95.p_E2F7 Q96AV8_S95s _1_1_95_95 Q96AV8 Q96AV8|Q96AV8-3 Transcription factor E2F7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16534.16534.3 11.95 11.95 2.273 2 1 1 0 585.3004 1673.9206 S95s TMT10 89 (K) MLISAAsPDIRDR (E) MLIS(0.0)AAS(0.99)PDIRDR s:Phosphorylated S E2F7 100342.7 2 2 2042.1 101.08 HUMAN 1 -1.405 -44.2048 KMLISAVSPEIRNRD-p A0AVK6;S71-p KMLISAVSPEIRNRD 0.478118474358418 0.0013036590626876 0.096 -1.253 5.89689454837442 46.9957085989966 0.096 -1.253 0.257223441868341 1.99723487112033e-05 1.26617436896003 -13.7744100088709 A0AVK6 E2F8 A0AVK6.S71.p_E2F8 A0AVK6_S71s _1_1_71_71 A0AVK6 A0AVK6 Transcription factor E2F8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24287.24287.3 16.53 15.26 3.306 2 1 1 0 508.9412 1444.8395 S71s TMT10 65 (K) MLISAVsPEIR (N) MLIS(0.0)AVS(0.99)PEIR s:Phosphorylated S E2F8 94792 5 3 1788.1 114.89 HUMAN 1 5.8969 -46.9957 KMLKKGGSWIQEINV-p P78527;S4026-p KMLKKGGSWIQEINV 0.289073375000317 0.0328898409225265 0.163333333333333 0.277333333333333 10.1627973435779 20.0047006544062 0.163333333333333 0.277333333333333 0.0963208409521542 0.0099891821987015 2.0100086529959 3.87633092124095 P78527 PRKDC P78527.S4026.p_PRKDC P78527_S4026s _1_1_4026_4026 P78527 P78527|P78527-2 DNA-dependent protein kinase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23027.23027.3 15.89 15.89 99 1 1 1 0 776.0977 2246.3112 S4026s TMT10 4023 (K) KGGsWIQEINVAEK (N) KGGS(1.0)WIQEINVAEK K:TMT10,s:Phosphorylated S PRKDC 474044.1 6 20 362.1 342.68 HUMAN 1 10.1628 20.0047 KMLRRSDSPENKYSD-p Q9BTA9;S64-p KMLRRSDSPENKYSD 0.0732937591551094 0.371310150345355 0.507333333333333 -0.101666666666667 24.3820753877701 5.70774221784132 0.507333333333333 -0.101666666666667 0.00364579681521941 0.268674084816459 4.88895873216491 -1.23204036424008 Q9BTA9 WAC Q9BTA9.S64.p_WAC Q9BTA9_S64s _1_1_64_64 Q9BTA9 Q9BTA9|Q9BTA9-2|Q9BTA9-5|A0A0A0MRT2|Q9BTA9-3 WW domain-containing adapter protein with coiled-coil HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4378.4378.4 17.67 12.92 2.117 7 1 1 0 666.3332 2582.3414 S64s TMT10 61 (R) RSDsPENKYSDSTGHSK (A) RS(0.0)DS(0.99)PENKY(0.0)S(0.0)DS(0.0)T(0.0)GHS(0.0)K K:TMT10,s:Phosphorylated S WAC 71065.3 7 2 918.1 200.44 HUMAN 1 24.3821 -5.7077 KMLRSPISPLSDASK-p P51826-2;S906-p KMLRSPISPLSDASK 0.846398595977906 0.0375057703303839 -0.0376666666666667 0.324 1.40086267203121 19.1571383606945 -0.0376666666666667 0.324 0.724292074163018 0.0121418863623146 -0.371613485947416 3.69707755331564 P51826 AFF3 P51826.2.S906.p_AFF3 P51826-2_S906s _1_1_906_906 P51826-2 P51826-2 Isoform 2 of AF4/FMR2 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18426.18426.2 11.26 11.26 3.126 4 1 1 0 820.4386 1559.9045 S906s TMT10 903 (R) SPIsPLSDASK (H) S(0.0)PIS(0.99)PLS(0.0)DAS(0.0)K K:TMT10,s:Phosphorylated S AFF3 137490.8 4 4 632.2 256.73 HUMAN 1 -1.4009 19.1571 KMLSRDSSQEYTDST-p B5MCU0;S143-p KMLSRDSSQEYTDST 0.173411535081407 0.245834080491579 -0.250666666666667 0.114333333333333 15.1650240720809 8.03052567498919 -0.250666666666667 0.114333333333333 0.0304437111563107 0.157379235931664 -2.90945926253991 1.63993371634569 B5MCU0 NotFound B5MCU0.S143.p_NotFound B5MCU0_S143s _1_1_143_143 B5MCU0 B5MCG9|B5MCU0|Q9Y2K5|A0A0U1RRA6 R3H domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30111.30111.4 25.61 25.61 1.104 7 1 1 0 877.7003 3427.82 S143s TMT10 141 (R) DSsQEYTDSTGIDLHEFLVNTLKK (N) DS(0.0)S(0.99)QEY(0.0)T(0.0)DS(0.0)T(0.0)GIDLHEFLVNT(0.0)LKK K:TMT10,s:Phosphorylated S R3HDM2 109377.4 20 2 761.1 230.16 HUMAN 1 -15.165 8.0305 KMLTGEESLTSGDAF-p Q99758;S1434-p KMLTGEESLTSGDAF 0.488088514771249 0.267159953305528 0.168333333333333 0.190666666666667 5.73677053972439 7.54785312478266 0.168333333333333 0.190666666666667 0.266884250669528 0.175879283421705 1.23752602107478 1.55614727218693 Q99758 ABCA3 Q99758.S1434.p_ABCA3 Q99758_S1434s _1_1_1434_1434 Q99758 Q99758|H0Y3H2 ATP-binding cassette sub-family A member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20121.20121.3 13.62 13.62 1.339 4 1 1 0 758.3538 2193.0807 S1434s TMT10 1428 (K) MLTGEEsLTSGDAFVGGHR (I) MLT(0.0)GEES(0.99)LT(0.0)S(0.0)GDAFVGGHR s:Phosphorylated S ABCA3 192956.2 1 13 1112.1 175.87 HUMAN 1 5.7368 7.5479 KMNAKWDTGENPIYK-p P05556;T777-p KMNAKWDTGENPIYK 0.285328406473615 0.278610598132371 -0.214666666666667 -0.114333333333333 10.2781781311748 7.3115541602859 -0.214666666666667 -0.114333333333333 0.0937955397445723 0.185713974267703 -2.03008365973579 -1.51500902260521 P05556 ITGB1 P05556.T777.p_ITGB1 P05556_T777t _1_1_777_777 P05556 P05556 Integrin beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20269.20269.3 11.84 11.84 10.366 2 1 1 0 587.6266 1680.8997 T777t TMT10 775 (K) WDtGENPIYK (S) WDT(0.99)GENPIY(0.0)K K:TMT10,t:Phosphorylated T ITGB1 91722.9 2 2 4854.1 25.81 HUMAN 1 -10.2782 -7.3116 KMNDFHISDDEEKNP-p Q49MG5;S79-p KMNDFHISDDEEKNP 0.344787190848241 0.618949304320441 -0.136333333333333 0.077 8.58936560319279 2.83150387972333 -0.136333333333333 0.077 0.138376849855663 0.521014262470285 -1.73727960763091 0.685882792910135 Q49MG5 MAP9 Q49MG5.S79.p_MAP9 Q49MG5_S79s _1_1_79_79 Q49MG5 Q49MG5|E7ETZ8|Q49MG5-2|A0A0C4DG83|A8MSM7 Microtubule-associated protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14975.14975.3 20.83 20.83 9.653 2 1 1 0 891.7672 2593.3171 S79s TMT10 73 (K) MNDFHIsDDEEKNPSK (L) MNDFHIS(0.99)DDEEKNPS(0.0)K K:TMT10,s:Phosphorylated S MAP9 74403.8 18 3 1396.1 146.8 HUMAN 1 -8.5894 2.8315 KMNEEISSDSESESL-p O43818;S51-p KMNEEISSDSESESL 0.6162038915283 0.0205844296633268 -0.0943333333333334 0.345333333333333 3.90236312392321 23.075412406237 -0.0943333333333334 0.345333333333333 0.407158670518287 0.00492559567649811 -0.898419642533256 4.56714065612563 O43818 RRP9 O43818.S51.p_RRP9 O43818_S50sS51sS53s_3_3_50_53 O43818 O43818 U3 small nucleolar RNA-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22373.22373.5 13.68 13.68 2.868 6 3 3 0 1045.2782 4982.4606 S50s S51s S53s TMT10 45 (K) MNEEIssDsESESLAPRKPEEEEEEELEETAQEKK (L) MNEEIS(0.99)S(0.99)DS(0.99)ES(0.0)ES(0.0)LAPRKPEEEEEEELEET(0.0)AQEKK K:TMT10,s:Phosphorylated S RRP9 52467.3 6 3 3279.1 55.18 HUMAN 1 -3.9024 23.0754 KMNGRKQSLGELIGT-p P60174;S58-p KMNGRKQSLGELIGT 0.463214351509227 0.154806212461727 0.114666666666667 0.194666666666667 6.1667574104736 10.6546604653289 0.114666666666667 0.194666666666667 0.241726497265197 0.0860070305199571 1.31421612994701 2.09480266486043 P60174 TPI1 P60174.S58.p_TPI1 P60174_S58s _1_1_58_58 P60174 P60174|P60174-1 Triosephosphate isomerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.33855.34061.5 31.6 28.87 4.087 5 1 1 0 897.4839 4403.4252 S58s TMT10 56 (R) KQsLGELIGTLNAAKVPADTEVVCAPPTAYIDFAR (Q) KQS(0.99)LGELIGT(0.0)LNAAKVPADT(0.0)EVVCAPPT(0.0)AY(0.0)IDFAR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TPI1 31075.7 54 1 1065.1 181.63 HUMAN 1 6.1668 10.6547 KMPARRASLSHPRDI-p P28799;S435-p KMPARRASLSHPRDI 0.229401753870038 0.255158199872721 -0.672333333333333 0.601333333333333 12.2850253236744 7.8147022933853 -0.672333333333333 0.601333333333333 0.0590877520162924 0.165397816023035 -2.3829945454534 1.60250351302716 P28799 GRN P28799.S435.p_GRN P28799_S435s _1_1_435_435 P28799 P28799|K7EQ05|P28799-3 Granulins HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3113.3113.3 7.32 4.14 2.323 2 1 1 0 411.5534 1152.6799 S435s TMT10 433 (R) RAsLSHPR (D) RAS(0.99)LS(0.0)HPR s:Phosphorylated S GRN 68564.2 1 1 7198.1 7.32 HUMAN 1 -12.285 7.8147 KMPFLSISSPKVSMP-p Q09666;S3411-p KMPFLSISSPKVSMP 0.233628206047255 0.211001456233923 -0.213 -0.142 12.1135511820486 8.88955683173393 -0.213 -0.142 0.0614674054406448 0.129135104056601 -2.35249170677803 -1.78860992530494 Q09666 AHNAK Q09666.S3411.p_AHNAK Q09666_S3411s _1_1_3411_3411 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29717.29717.3 16.93 16.93 1.218 3 1 1 0 717.0739 2069.2436 S3411s TMT10 3403 (K) FKMPFLSIsSPK (V) FKMPFLS(0.0)IS(0.99)S(0.0)PK K:TMT10,s:Phosphorylated S AHNAK 629603.7 19 85 1.1 4313.36 HUMAN 1 -12.1136 -8.8896 KMPKFNFSKPKGKGG-p Q09666;S5720-p KMPKFNFSKPKGKGG 0.497103888080226 0.613892799001353 -0.139666666666667 -0.079 5.5913790352539 2.88088008184896 -0.139666666666667 -0.079 0.275970141638729 0.515124245963805 -1.2114126271063 -0.696016594747887 Q09666 AHNAK Q09666.S5720.p_AHNAK Q09666_S5720s _1_1_5720_5720 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17528.17528.3 8.75 8.75 99 1 1 1 0 545.6477 1554.9611 S5720s TMT10 5717 (K) FNFsKPK (G) FNFS(1.0)KPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 153 1.1 4313.36 HUMAN 1 -5.5914 -2.8809 KMPKIHMSGPKIKAK-p Q09666;S5031-p KMPKIHMSGPKIKAK 0.191404434921086 0.082142595197567 -0.230666666666667 -0.375333333333333 14.0210823701106 14.3852832984888 -0.230666666666667 -0.375333333333333 0.0396179284196816 0.0364310484632743 -2.69679007014488 -2.76222322363378 Q09666 AHNAK Q09666.S5031.p_AHNAK Q09666_S5031s _1_1_5031_5031 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10997.10997.2 12.45 8.52 99 1 1 1 0 654.3513 1227.7284 S5031s TMT10 5028 (K) IHMsGPK (I) IHMS(1.0)GPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 5 115 1.1 4313.36 HUMAN 1 -14.0211 -14.3853 KMPKSPKSPRSPLEA-p Q92610;S331-p KMPKSPKSPRSPLEA 0.599561298261351 0.867048566703714 0.0873333333333333 0.0246666666666667 4.10277384458524 0.872143679882398 0.0873333333333333 0.0246666666666667 0.388796740683459 0.818060893167781 0.936724624451293 0.241468794648291 Q92610 ZNF592 Q92610.S331.p_ZNF592 Q92610_S328sS331s_2_2_328_331 Q92610 Q92610|H0YM74 Zinc finger protein 592 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9194.9194.5 7.22 7.22 7.223 4 2 2 0 481.0649 2241.3646 S328s S331s TMT10 328 (K) sPKsPRSPLEATRK (S) S(0.99)PKS(0.99)PRS(0.0)PLEAT(0.0)RK K:TMT10,s:Phosphorylated S ZNF592 140207.3 3 22 164.1 494.76 HUMAN 1 4.1028 0.8721 KMPSFGVSAPGKSME-p Q8IVF2;S846-p KMPSFGVSAPGKSME 0.322168845598486 0.139613235831994 -0.153 0.228333333333333 9.21028937052268 11.266186060498 -0.153 0.228333333333333 0.119941938314316 0.0747104571679078 -1.84477124303677 2.20178966845415 Q8IVF2 AHNAK2 Q8IVF2.S846.p_AHNAK2 Q8IVF2_S846s _1_1_846_846 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24409.24409.3 9.21 9.21 9.206 2 1 1 0 707.3937 2040.1919 S846s TMT10 838 (K) FKMPSFGVsAPGK (S) FKMPS(0.0)FGVS(0.99)APGK K:TMT10,s:Phosphorylated S AHNAK2 617759.6 1 11 237.1 418.35 HUMAN 1 -9.2103 11.2662 KMREVRPSPSKTVKY-p Q92833;S331-p KMREVRPSPSKTVKY 0.572301168829667 0.00930867383025303 0.0836666666666667 -0.884333333333333 4.46437524796559 28.6783271686364 0.0836666666666667 -0.884333333333333 0.357735858778265 0.00135571150970882 1.00491804759018 -6.03085598370189 Q92833 JARID2 Q92833.S331.p_JARID2 Q92833_S331s _1_1_331_331 Q92833 Q92833|Q92833-3|Q92833-2 Protein Jumonji HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5761.5761.3 12.04 2.15 2.832 2 1 1 0 479.9341 1357.8204 S331s TMT10 327 (R) EVRPsPSK (T) EVRPS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S JARID2 140386.6 4 2 3717.1 44.66 HUMAN 1 4.4644 -28.6783 KMRLRDHSSERSEVL-p Q7Z3B3;S792-p KMRLRDHSSERSEVL 0.155294829816211 0.665486430286355 0.286333333333333 -0.044 16.2520359119165 2.42108965319 0.286333333333333 -0.044 0.0237026229929203 0.57265233339011 3.11673460113873 -0.600084776335246 Q7Z3B3 KANSL1 Q7Z3B3.S792.p_KANSL1 Q7Z3B3_S792s _1_1_792_792 Q7Z3B3 Q7Z3B3|A0A0G2JQF4|A0A0G2JNT7|A0A0G2JNB1|Q7Z3B3-2 KAT8 regulatory NSL complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6461.6461.4 10.06 10.06 1.133 3 1 1 0 524.283 2014.1446 S792s TMT10 788 (R) LRDHsSERSEVLK (H) LRDHS(0.99)S(0.0)ERS(0.0)EVLK K:TMT10,s:Phosphorylated S KANSL1 121821.3 1 6 391.1 332.08 HUMAN 1 16.252 -2.4211 KMRVHKISNVNKALD-p P12814-4;S91-p KMRVHKISNVNKALD 0.822315684676711 0.125318554288926 0.036 0.226 1.63549054776457 11.892986361616 0.036 0.226 0.686200365783298 0.0646697770686538 0.42647517550297 2.31222602203295 P12814 ACTN1 P12814.4.S91.p_ACTN1 P12814-4_S91s _1_1_91_91 P12814-4 P12814-4|P12814-3|P12814-2|H9KV75 Isoform 4 of Alpha-actinin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5811.5811.3 7.45 7.45 99 1 1 1 0 526.3049 1496.9313 S91s Hydrogen 87 (R) VHKIsNVNK (A) VHKIS(1.0)NVNK K:TMT10-Lys-Only,s:Phosphorylated S ACTN1 107710.1 1 12 1097.2 178.17 HUMAN 1 1.6355 11.893 KMSDAQGSYKLDEAQ-p Q8IX03-2;S208-p KMSDAQGSYKLDEAQ 0.493093798200756 0.784997486043184 0.105333333333333 -0.029 5.65355402782703 1.45769815080568 0.105333333333333 -0.029 0.272047411010164 0.714875124054873 1.22259192415241 -0.385008980287775 Q8IX03 WWC1 Q8IX03.2.S208.p_WWC1 Q8IX03-2_S208s _1_1_208_208 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18588.18588.4 11.59 11.59 2.523 3 1 1 0 720.1371 2797.5485 S208s TMT10 201 (K) KMSDAQGsYKLDEAQAVLR (E) KMS(0.0)DAQGS(0.99)Y(0.0)KLDEAQAVLR K:TMT10,s:Phosphorylated S WWC1 126701.1 2 4 312.1 370.85 HUMAN 1 5.6536 -1.4577 KMSGLHISGGQSVLE-p Q14966;S299-p KMSGLHISGGQSVLE 0.168658916684596 0.532320279866476 -0.448 0.0653333333333334 15.4329332815358 3.68151129665325 -0.448 0.0653333333333334 0.0286224411992184 0.428399416207829 -2.96004944251509 0.855601988559616 Q14966 ZNF638 Q14966.S299.p_ZNF638 Q14966_S299s _1_1_299_299 Q14966 Q14966|Q14966-3|Q14966-4|A0A096LPH6|Q14966-2 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24129.24129.3 16.19 16.19 2.89 3 1 1 0 764.4127 2211.2571 S299s TMT10 293 (K) MSGLHIsGGQSVLEPIK (S) MS(0.0)GLHIS(0.99)GGQS(0.0)VLEPIK K:TMT10,s:Phosphorylated S ZNF638 222047.2 4 2 165.1 494.68 HUMAN 1 -15.4329 3.6815 KMTAGKRSPPIKPLL-p Q96L91;S2476-p KMTAGKRSPPIKPLL 0.275495542064131 0.720024829678935 -0.167666666666667 -0.0363333333333333 10.5945962255411 1.96581450240128 -0.167666666666667 -0.0363333333333333 0.0872047974002872 0.635943524918891 -2.08522855966186 -0.501160214067635 Q96L91 EP400 Q96L91.S2476.p_EP400 Q96L91_S2476s _1_1_2476_2476 Q96L91 Q96L91|Q96L91-2|Q96L91-5|Q96L91-3|Q96L91-4 E1A-binding protein p400 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25177.25177.4 15.46 13.26 99 1 1 1 0 648.3806 2510.5248 S2476s TMT10 2475 (K) RsPPIKPLLGMNPFQK (N) RS(1.0)PPIKPLLGMNPFQK K:TMT10,s:Phosphorylated S EP400 344909.2 4 24 91.1 620.97 HUMAN 1 -10.5946 -1.9658 KMTELFQSLADLNNV-p P46939;S2851-p KMTELFQSLADLNNV 0.903709855461706 0.17296431131349 0.0263333333333333 0.155 0.86463806560516 10.0195701532525 0.0263333333333333 0.155 0.819475914206953 0.0995503943345778 0.239570939470771 1.98430646560115 P46939 UTRN P46939.S2851.p_UTRN P46939_S2851s _1_1_2851_2851 P46939 P46939-2|P46939-4 Utrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33631.33631.3 9.78 9.78 9.782 2 1 1 0 687.342 1980.0422 S2851s TMT10 2845 (K) MTELFQsLADLNNVR (F) MT(0.0)ELFQS(0.99)LADLNNVR s:Phosphorylated S UTRN 396684.3 1 17 527.1 282.18 HUMAN 1 0.8646 10.0196 KMVPKLLSPLVKDWA-p Q9HAB8;S215-p KMVPKLLSPLVKDWA 0.490461337009155 0.40416976689046 -0.123333333333333 0.103666666666667 5.70121869210844 5.23532339638306 -0.123333333333333 0.103666666666667 0.269077962692694 0.299548852576146 -1.2311497897503 1.14677160437453 Q9HAB8 PPCS Q9HAB8.S215.p_PPCS Q9HAB8_S215s _1_1_215_215 Q9HAB8 Q9HAB8|Q9HAB8-2 Phosphopantothenate--cysteine ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26970.26970.2 7.42 7.42 99 1 1 1 0 654.4091 1227.8441 S215s TMT10 213 (K) LLsPLVK (D) LLS(1.0)PLVK K:TMT10,s:Phosphorylated S PPCS 34004.5 1 2 5302.1 20.79 HUMAN 1 -5.7012 5.2353 KNAFYIGSYQQCINE-p M0QXB4;S30-p KNAFYIGSYQQCINE 0.463181350081305 0.63708642704889 0.154 -0.062 6.16741314551791 2.66481607008691 0.154 -0.062 0.241690002081373 0.541400176467532 1.31433252378317 -0.651384044592167 M0QXB4 COPE M0QXB4.S30.p_COPE M0QXB4_S30s _1_1_30_30 M0QXB4 M0QXB4|O14579|O14579-2|O14579-3|M0R061 Coatomer protein complex, subunit epsilon, isoform CRA_g HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21586.21586.3 16.26 16.26 1.302 3 1 1 0 791.0294 2291.1076 S30s TMT10 24 (K) NAFYIGsYQQCINEAQR (V) NAFY(0.0)IGS(0.99)Y(0.0)QQCINEAQR C:Carbamidomethylation,s:Phosphorylated S COPE 37094.2 1 1 2437.1 83.45 HUMAN 1 6.1674 -2.6648 KNAGNCLSPAVIVGL-p A0A2C9F2M7;S371-p KNAGNCLSPAVIVGL 0.761476943047114 0.0319085374481991 0.043 0.301666666666667 2.26694920099879 20.2022338770342 0.043 0.301666666666667 0.593341984602634 0.00954501493565162 0.567140602763346 3.91877259752676 A0A2C9F2M7 NotFound A0A2C9F2M7.S371.p_NotFound A0A2C9F2M7_S371s _1_1_371_371 A0A2C9F2M7 A0A2C9F2M7|A0A286YF22 D-3-phosphoglycerate dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35323.35521.3 15.06 15.06 99 1 1 1 0 722.0702 2084.2302 S371s TMT10 365 (K) NAGNCLsPAVIVGLLK (E) NAGNCLS(1.0)PAVIVGLLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PHGDH 56909.6 1 8 1205.1 166.89 HUMAN 1 2.2669 20.2022 KNAGVEGSLIVEKIM-p P10809;S488-p KNAGVEGSLIVEKIM 0.269333501255224 0.0145118438020208 0.186333333333333 0.412666666666667 10.8048664719728 25.4719254201239 0.186333333333333 0.412666666666667 0.0830832263048471 0.00283666113188612 2.12195758108743 5.15770614234 P10809 HSPD1 P10809.S488.p_HSPD1 P10809_S488s _1_1_488_488 P10809 P10809 60 kDa heat shock protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18037.18037.3 12.05 11.64 99 1 1 1 0 585.3217 1673.9838 S488s TMT10 482 (K) NAGVEGsLIVEK (I) NAGVEGS(1.0)LIVEK K:TMT10,s:Phosphorylated S HSPD1 61224.7 1 11 1165.1 170.59 HUMAN 1 10.8049 25.4719 KNAIASDSEADSDTE-p Q8WVC0;S296-p KNAIASDSEADSDTE 0.145835187369471 0.0206907854655544 -0.511666666666667 0.417333333333333 17.0317744128327 23.0415940807811 -0.511666666666667 0.417333333333334 0.0198071759143623 0.0049641008035674 -3.26889566830334 4.55914896484008 Q8WVC0 LEO1 Q8WVC0.S296.p_LEO1 Q8WVC0_S294sS296sS300s_3_3_294_300 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17433.17433.2 13.8 9.91 2.119 4 3 3 0 1224.012 2207.108 S294s S296s S300s TMT10 290 (K) NAIAsDsEADsDTEVPK (D) NAIAS(0.99)DS(0.99)EADS(0.99)DT(0.0)EVPK K:TMT10,s:Phosphorylated S LEO1 75516.9 7 23 514.1 286.88 HUMAN 1 -17.0318 23.0416 KNAKKEDSDEEEDDD-p P19338;S145-p KNAKKEDSDEEEDDD 0.297176191192085 0.00400140022563593 0.269333333333333 1.77033333333333 9.92956922682049 35.3424658432201 0.269333333333333 1.77033333333333 0.101634949875489 0.000292249256980776 1.96947677487746 8.22114542835348 P19338 NCL P19338.S145.p_NCL P19338_S145s _1_1_145_145 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16312.16312.5 25.99 25.99 6.063 2 1 1 0 978.1886 4806.9318 S145s TMT10 142 (K) KEDsDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMK (A) KEDS(0.99)DEEEDDDS(0.0)EEDEEDDEDEDEDEDEIEPAAMK K:TMT10,s:Phosphorylated S NCL 76670.1 7 7 114.1 570.88 HUMAN 1 9.9296 35.3425 KNCFIRGSVVRYVQL-p Q9Y333;S65-p KNCFIRGSVVRYVQL 0.164565325987021 0.00917359434218356 0.241 0.422333333333333 15.6961722533372 28.7989723111578 0.241 0.422333333333333 0.0269390809101591 0.00131856871996566 3.01006715452303 6.06575780285728 Q9Y333 LSM2 Q9Y333.S65.p_LSM2 Q9Y333_S65s _1_1_65_65 Q9Y333 Q9Y333 U6 snRNA-associated Sm-like protein LSm2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12116.12116.3 9.43 9.43 99 1 1 1 0 506.2605 1436.7994 S65s TMT10 59 (K) NCFIRGsVVR (Y) NCFIRGS(1.0)VVR C:Carbamidomethylation,s:Phosphorylated S LSM2 10948.4 1 1 6799.1 9.43 HUMAN 1 15.6962 28.799 KNDLQSPTEHISDYG-p O43295;T839-p KNDLQSPTEHISDYG 0.0395731079578075 0.00413791477536262 -0.531666666666667 -0.562 31.3517954469381 35.0747694949652 -0.531666666666667 -0.562 0.00073252163368235 0.000310830087374819 -6.85418915278419 -8.12177964329353 O43295 SRGAP3 O43295.T839.p_SRGAP3 O43295_T839t _1_1_839_839 O43295 O43295|O43295-2 SLIT-ROBO Rho GTPase-activating protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18857.18857.4 16.38 16.38 1.112 6 1 1 0 798.633 3111.557 T839t TMT10 829 (K) ASSKNDLQSPtEHISDYGFGGVMGR (V) AS(0.0)S(0.0)KNDLQS(0.0)PT(0.99)EHIS(0.0)DY(0.0)GFGGVMGR K:TMT10,t:Phosphorylated T SRGAP3 125471.5 1 5 754.1 231.27 HUMAN 1 -31.3518 -35.0748 KNDMAVPTPPPPPVP-p Q96RN5;T603-p KNDMAVPTPPPPPVP 0.79382020749629 0.138123156165408 0.0413333333333333 0.180666666666667 1.93574738551599 11.3265578042703 0.0413333333333333 0.180666666666667 0.640361571063144 0.073679084276041 0.494525349296403 2.21238971270605 Q96RN5 MED15 Q96RN5.T603.p_MED15 Q96RN5_T603t _1_1_603_603 Q96RN5 Q96RN5|Q96RN5-2|G3V1P5|Q96RN5-3 Mediator of RNA polymerase II transcription subunit 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21649.21857.3 18.32 18.32 18.322 2 1 1 0 921.855 2683.5824 T603t TMT10 595 (K) LKNDMAVPtPPPPPVPPTK (Q) LKNDMAVPT(0.99)PPPPPVPPT(0.0)K K:TMT10,t:Phosphorylated T MED15 87208.4 6 3 3276.1 55.22 HUMAN 1 1.9357 11.3266 KNDPSAESEGL____-p Q96EY8;S247-p KNDPSAESEGL____ 0.471197106492102 0.0178379982591039 0.0956666666666667 -0.407333333333333 6.03092418614725 24.0815621019472 0.0956666666666667 -0.407333333333333 0.249406392936225 0.00390700340578734 1.29007061868339 -4.80914581112693 Q96EY8 MMAB Q96EY8.S247.p_MMAB Q96EY8_S247s _1_1_247_247 Q96EY8 Q96EY8|S4R3P5 Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20385.20385.3 8.16 8.16 8.159 3 1 1 0 698.007 2012.0411 S247s TMT10 237 (K) IYMKNDPSAEsEGL (-) IY(0.0)MKNDPS(0.0)AES(0.99)EGL K:TMT10,s:Phosphorylated S MMAB 27730.1 1 2 5698.1 17.05 HUMAN 1 6.0309 -24.0816 KNEEPVRSPERRDRK-p Q92922;S310-p KNEEPVRSPERRDRK 0.908351461676759 0.0112955962615075 0.0216666666666667 -0.44 0.821315445186727 27.2630975276803 0.0216666666666667 -0.44 0.827691424259223 0.0018779769056025 0.228436494303526 -5.63286996686777 Q92922 SMARCC1 Q92922.S310.p_SMARCC1 Q92922_S310s _1_1_310_310 Q92922 Q92922 SWI/SNF complex subunit SMARCC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6935.6935.4 13.64 13.64 6.863 3 1 1 0 545.7922 2100.1813 S310s TMT10 300 (R) ISTKNEEPVRsPER (R) IS(0.0)T(0.0)KNEEPVRS(0.99)PER K:TMT10,s:Phosphorylated S SMARCC1 123378.3 4 1 2356.1 86.86 HUMAN 1 0.8213 -27.2631 KNEGRPETPKHRHDN-p Q6KC79;T757-p KNEGRPETPKHRHDN 0.4319622910657 0.00466139754088865 -0.224666666666667 0.605 6.71173098931316 34.1032183749988 -0.224666666666667 0.605 0.213219490413752 0.000388756946686956 -1.41045276838189 7.76984183625894 Q6KC79 NIPBL Q6KC79.T757.p_NIPBL Q6KC79_T757t _1_1_757_757 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4577.4577.2 10.04 4.03 99 1 1 1 0 783.4084 1485.8426 T757t TMT10 751 (K) NEGRPEtPK (H) NEGRPET(1.0)PK K:TMT10,t:Phosphorylated T NIPBL 318099.5 6 16 50.1 752.87 HUMAN 1 -6.7117 34.1032 KNEKMLRSPISPLSD-p P51826-2;S903-p KNEKMLRSPISPLSD 0.907675071086955 0.0263581786161247 0.0263333333333333 0.301 0.826335861724838 21.4470764257158 0.0263333333333333 0.301 0.826735171064512 0.00716625664401941 0.229730762073991 4.19233179984008 P51826 AFF3 P51826.2.S903.p_AFF3 P51826-2_S903s _1_1_903_903 P51826-2 P51826-2 Isoform 2 of AF4/FMR2 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19331.19331.3 11.34 11.34 5.45 4 1 1 0 680.7034 1960.1302 S903s TMT10 900 (K) MLRsPISPLSDASK (H) MLRS(0.99)PIS(0.0)PLS(0.0)DAS(0.0)K K:TMT10,s:Phosphorylated S AFF3 137490.8 3 3 632.2 256.73 HUMAN 1 0.8263 21.4471 KNENTEGSPQEDGVE-p P11388-2;S1273-p KNENTEGSPQEDGVE 0.953361990350314 0.0114504617192839 -0.00933333333333333 -0.409666666666667 0.409765338994799 27.1638157218223 -0.00933333333333333 -0.409666666666667 0.909962439025279 0.00192140283790626 -0.118478578722101 -5.60571939054315 P11388 TOP2A P11388.2.S1273.p_TOP2A P11388-2_S1273s _1_1_1273_1273 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18985.19187.3 22.6 17.12 4.689 2 1 1 0 1018.5266 2973.5984 S1273s TMT10 1265 (K) IKNENTEGsPQEDGVELEGLK (Q) IKNENT(0.0)EGS(0.99)PQEDGVELEGLK K:TMT10,s:Phosphorylated S TOP2A 178239.3 21 8 71.2 658.36 HUMAN 1 -0.4098 -27.1638 KNESSNASEEEACEK-p Q9H6Z4-3;S176-p KNESSNASEEEACEK 0.259411432378501 0.0425728805842063 -0.607333333333333 0.303666666666667 11.127466422604 18.3651955917671 -0.607333333333333 0.303666666666667 0.0771353328205216 0.0145707008167012 -2.17845555685931 3.53358743932623 Q9H6Z4 RANBP3 Q9H6Z4.3.S176.p_RANBP3 Q9H6Z4-3_S176s _1_1_176_176 Q9H6Z4-3 Q9H6Z4|Q9H6Z4-3 Isoform 3 of Ran-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18613.18613.5 27.99 25.52 3.11 5 1 1 0 936.4412 4598.2168 S176s TMT10 151 (R) SPSEAADEVCALEEKEPQKNESSNAsEEEACEK (K) S(0.0)PS(0.0)EAADEVCALEEKEPQKNES(0.0)S(0.0)NAS(0.99)EEEACEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RANBP3 53752.1 2 8 444.1 311.24 HUMAN 1 -11.1275 18.3652 KNETENDSKDAEKNR-p Q12830;S587-p KNETENDSKDAEKNR 0.42081761725115 0.0121052262026033 -0.412666666666667 0.593666666666667 6.9355788076086 26.7762673320573 -0.412666666666667 0.593666666666667 0.202507969557897 0.00210074465291339 -1.44973184599218 5.50067060384803 Q12830 BPTF Q12830.S587.p_BPTF Q12830_S587s _1_1_587_587 Q12830 Q12830|Q12830-2|Q12830-4|A0A0A0MR81 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5973.5973.4 8.33 8.33 8.327 2 1 1 0 655.5899 2539.3657 S587s TMT10 579 (K) DKNETENDsKDAEK (N) DKNET(0.0)ENDS(0.99)KDAEK K:TMT10,s:Phosphorylated S BPTF 340995.1 1 3 94.1 610.41 HUMAN 1 -6.9356 26.7763 KNFDDEDSVDGNRPS-p Q7Z460-4;S246-p KNFDDEDSVDGNRPS 0.101475037959758 0.249841598430568 0.367666666666667 -0.123 21.0070774633866 7.9360870820821 0.363917040555152 -0.123 0.00793034814954151 0.160838973162531 4.0984912610267 -1.62356115078649 Q7Z460 CLASP1 Q7Z460.4.S246.p_CLASP1 Q7Z460-4_S246s _1_1_246_246 Q7Z460-4 Q7Z460|Q7Z460-3|Q7Z460-5|F8WA11|Q7Z460-4|Q7Z460-2 Isoform 4 of CLIP-associating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9036.9036.3 18.16 15.08 5.331 8 1 1 0 947.4271 2760.296 S246s TMT10 240 (K) NFDDEDsVDGNRPSSASSTSSK (A) NFDDEDS(0.99)VDGNRPS(0.0)S(0.0)AS(0.0)S(0.0)T(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CLASP1 164028.5 3 36 158.3 498.15 HUMAN 1 21.0071 -7.9361 KNFKRRFSLSVPRTE-p Q07002-2;S14-p KNFKRRFSLSVPRTE 0.0386603595331013 0.0907175315119732 0.878333333333333 0.194666666666667 32.1246680726008 13.7889685228657 0.878333333333333 0.194666666666667 0.00061310264924785 0.0417929615813202 7.10552492594408 2.65269159521567 Q07002 CDK18 Q07002.2.S14.p_CDK18 Q07002-2_S14s _1_1_14_14 Q07002-2 Q07002-3|Q07002-2|D6R9X1 Isoform 2 of Cyclin-dependent kinase 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15802.15802.3 9.08 9.08 2.838 2 1 1 0 424.2336 1190.7207 S14s TMT10 12 (R) RFsLSVPR (T) RFS(0.99)LS(0.0)VPR s:Phosphorylated S CDK18 54765.8 2 2 1225.1 164.54 HUMAN 1 32.1247 13.789 KNFQKELSDLEEENR-p Q5M775;S241-p KNFQKELSDLEEENR 0.146674740935683 0.0557146917873102 -0.264 -0.22 16.9594332870692 16.7078935506731 -0.264 -0.22 0.0201398703884091 0.0213407975034501 -3.25464910246382 -3.20293290522322 Q5M775 SPECC1 Q5M775.S241.p_SPECC1 Q5M775_S241s _1_1_241_241 Q5M775 Q5M775|Q5M775-4|Q5M775-2|Q5M775-3|Q5M775-5 Cytospin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19850.19850.3 11.35 11.35 99 1 1 1 0 704.7043 2032.1327 S241s TMT10 239 (K) ELsDLEEENRVLK (E) ELS(1.0)DLEEENRVLK K:TMT10,s:Phosphorylated S SPECC1 119267.5 4 9 330.1 358.68 HUMAN 1 -16.9594 -16.7079 KNFQPRISYPAKLSF-p Q9UN81;S281-p KNFQPRISYPAKLSF 0.0395731079578075 0.252845490518138 -0.515666666666667 -0.217 31.365535458841 7.86457418302343 -0.515666666666667 -0.217 0.000730207777118589 0.163509346088532 -6.85859228528331 -1.61115716410385 Q9UN81 NotFound Q9UN81.S281.p_NotFound Q9UN81_S281s _1_1_281_281 Q9UN81 Q9UN81 LINE-1 retrotransposable element ORF1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16423.16423.3 10.64 5.53 4.223 2 1 1 0 620.3372 1779.0318 S281s TMT10 275 (K) NFQPRIsYPAK (L) NFQPRIS(0.99)Y(0.0)PAK K:TMT10,s:Phosphorylated S L1RE1 40283.2 1 160 240.3 415.72 HUMAN 1 -31.3655 -7.8646 KNGDGFVSLEEFLGD-p A8MXP8;S106-p KNGDGFVSLEEFLGD 0.459152430542572 0.0407668156705007 0.107666666666667 0.413666666666667 6.23405204369708 18.6285632893932 0.107666666666667 0.413666666666667 0.238009776011281 0.0137133534922243 1.32615285558104 3.58754324640494 A8MXP8 NotFound A8MXP8.S106.p_NotFound A8MXP8_S106s _1_1_106_106 A8MXP8 Q14257-2|A8MXP8 Reticulocalbin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34731.34731.3 18.31 18.31 18.315 2 1 1 0 709.6596 2046.997 S106s TMT10 100 (K) NGDGFVsLEEFLGDYR (W) NGDGFVS(0.99)LEEFLGDY(0.0)R s:Phosphorylated S RCN2 24852.9 1 1 4901.1 25.27 HUMAN 1 6.2341 18.6286 KNGRKAASFLKDDGD-p O14730;S505-p KNGRKAASFLKDDGD 0.0866557243462627 0.0133262814067011 -0.363333333333333 -0.414 22.6973413378163 26.0848877976186 -0.363333333333333 -0.414 0.00537360656926381 0.00246326547723907 -4.48324137405868 -5.31688350448132 O14730 RIOK3 O14730.S505.p_RIOK3 O14730_S505s _1_1_505_505 O14730 O14730|O14730-2|B4E1Q4 Serine/threonine-protein kinase RIO3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29236.29236.3 15.89 12.02 7.126 2 1 1 0 802.0625 2324.2062 S505s TMT10 503 (K) AAsFLKDDGDPPLLYDE (-) AAS(0.99)FLKDDGDPPLLY(0.0)DE K:TMT10,s:Phosphorylated S RIOK3 59548.4 1 2 3155.1 59.09 HUMAN 1 -22.6973 -26.0849 KNGRRTSSTLDSEGT-p Q92609-2;S44-p KNGRRTSSTLDSEGT 0.295243174589512 0.0247778395154067 -0.195666666666667 -0.328666666666667 9.98163264711844 21.8472002684269 -0.195666666666667 -0.328666666666667 0.100423819514782 0.00653551736853999 -1.97851958598213 -4.28258690797786 Q92609 TBC1D5 Q92609.2.S44.p_TBC1D5 Q92609-2_S44s _1_1_44_44 Q92609-2 Q92609-2 Isoform 2 of TBC1 domain family member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14562.14562.2 11.46 2.15 1.129 8 1 1 0 987.437 1893.9028 S44s TMT10 42 (R) TSsTLDSEGTFNSYR (K) T(0.0)S(0.0)S(0.99)T(0.0)LDS(0.0)EGT(0.0)FNS(0.0)Y(0.0)R s:Phosphorylated S TBC1D5 91784.7 2 2 328.1 359.68 HUMAN 1 -9.9816 -21.8472 KNGTLILSPVDIKKI-p Q8NDD1;S280-p KNGTLILSPVDIKKI 0.0611620058899374 0.00111236741277421 -0.476666666666667 -1.40566666666667 26.4785593006768 49.6157543688888 -0.476666666666667 -1.40566666666667 0.00224980081585822 1.09250784225192e-05 -5.42826357952599 -15.4333585247009 Q8NDD1 C1orf131 Q8NDD1.S280.p_C1orf131 Q8NDD1_S280s _1_1_280_280 Q8NDD1 Q8NDD1|Q8NDD1-2 Uncharacterized protein C1orf131 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23087.23087.3 17.37 17.37 5.31 2 1 1 0 722.4355 2085.325 S280s TMT10 274 (K) NGTLILsPVDIKK (I) NGT(0.0)LILS(0.99)PVDIKK K:TMT10,s:Phosphorylated S C1orf131 32822.9 7 4 1643.1 124.3 HUMAN 1 -26.4786 -49.6158 KNGVHRKSDPEELRE-p Q14789-2;S3134-p KNGVHRKSDPEELRE 0.0973600331101722 0.0105407926544461 0.393666666666667 0.536666666666667 21.4549541952859 27.7251451581381 0.393666666666667 0.536666666666667 0.00715326938535249 0.00168843942431908 4.19839168063329 5.76053113781835 Q14789 GOLGB1 Q14789.2.S3134.p_GOLGB1 Q14789-2_S3134s _1_1_3134_3134 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11924.11924.5 24.22 24.22 3.596 4 1 1 0 822.2045 4027.0204 S3134s TMT10 3128 (K) NGVHRKsDPEELREPQQSFSEAQQQLCNTR (Q) NGVHRKS(0.99)DPEELREPQQS(0.0)FS(0.0)EAQQQLCNT(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GOLGB1 378557.2 3 30 93.1 610.98 HUMAN 1 21.455 27.7251 KNHAAPFSKVLTFYR-p P34932;S429-p KNHAAPFSKVLTFYR 0.465203752033176 0.291876885535623 -0.128333333333333 0.127333333333333 6.13353747538569 7.05886958569579 -0.128333333333333 0.127333333333333 0.243582594751921 0.196839857260176 -1.30831746406499 1.47090432976478 P34932 HSPA4 P34932.S429.p_HSPA4 P34932_S429s _1_1_429_429 P34932 Q92598-4|P34932|Q92598-3|Q92598-2|A0A0A0MSM0|A0A087WYC1|A0A087WTS8 Heat shock 70 kDa protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9233.9233.3 11.98 11.98 99 1 1 1 0 470.5829 1329.7679 S429s TMT10 423 (K) NHAAPFsK (V) NHAAPFS(1.0)K K:TMT10,s:Phosphorylated S HSPA4 95185.1 1 12 549.1 274.67 HUMAN 1 -6.1335 7.0589 KNHTEDESLEGIQPP-p Q8IY42;S216-p KNHTEDESLEGIQPP 0.906091495485362 0.304953925483462 0.018 -0.099 0.841465441299972 6.8118121795153 0.018 -0.099 0.823860072730137 0.208362126954408 0.233624876774317 -1.42764618179489 Q8IY42 C4orf19 Q8IY42.S216.p_C4orf19 Q8IY42_S216s _1_1_216_216 Q8IY42 Q8IY42 Uncharacterized protein C4orf19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20047.20047.3 29.04 21.8 4.306 4 1 1 0 1090.188 3188.581 S216s TMT10 210 (K) NHTEDEsLEGIQPPVGEHGLNTPFSVR (R) NHT(0.0)EDES(0.99)LEGIQPPVGEHGLNT(0.0)PFS(0.0)VR s:Phosphorylated S C4orf19 34254.4 7 5 703.1 239.48 HUMAN 1 0.8415 -6.8118 KNIITNLSKCDFTQM-p P11387;S298-p KNIITNLSKCDFTQM 0.332506650037462 0.0159687474040441 -0.223 0.446333333333333 8.92811933971098 24.8237372318994 -0.223 0.446333333333334 0.127993544489639 0.00329326195319216 -1.79591988626414 4.99309809554055 P11387 TOP1 P11387.S298.p_TOP1 P11387_S298s _1_1_298_298 P11387 P11387 DNA topoisomerase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18447.18447.2 9.4 4.29 3.041 2 1 1 0 720.9167 1360.8564 S298s TMT10 292 (K) NIITNLsK (C) NIIT(0.0)NLS(0.99)K K:TMT10,s:Phosphorylated S TOP1 91180.5 1 5 1682.1 121.32 HUMAN 1 -8.9281 24.8237 KNIKDVQSPGFLNEP-p Q8NG31;S1076-p KNIKDVQSPGFLNEP 0.548579795198745 0.00491178217857373 -0.09 -0.561333333333333 4.81141607218049 33.6872737005241 -0.09 -0.561333333333333 0.330261837422414 0.000427831374578835 -1.06938304337103 -7.6232294101041 Q8NG31 CASC5 Q8NG31.S1076.p_CASC5 Q8NG31_S1076s _1_1_1076_1076 Q8NG31 Q8NG31|Q8NG31-2|Q8NG31-4 Kinetochore scaffold 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22837.22837.3 15.93 15.93 9.613 3 1 1 0 719.3743 2076.1377 S1076s TMT10 1073 (K) DVQsPGFLNEPLSSK (S) DVQS(0.99)PGFLNEPLS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S KNL1 268353.4 4 10 650.1 254.2 HUMAN 1 -4.8114 -33.6873 KNISSSPSVESLPGG-p Q92609-2;S563-p KNISSSPSVESLPGG 0.0371346725839495 0.0122787245480298 -0.624666666666667 -0.600333333333333 32.6943107227926 26.6759933891927 -0.624666666666667 -0.600333333333333 0.000537735771438682 0.00214981288282052 -7.29564449669764 -5.47373007389292 Q92609 TBC1D5 Q92609.2.S563.p_TBC1D5 Q92609-2_S563s _1_1_563_563 Q92609-2 Q92609-2|C9J3F6 Isoform 2 of TBC1 domain family member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13467.13467.2 17.73 14.63 1.892 5 1 1 0 898.4423 1715.9125 S563s TMT10 557 (K) NISSSPsVESLPGGR (E) NIS(0.0)S(0.0)S(0.0)PS(0.99)VES(0.0)LPGGR s:Phosphorylated S TBC1D5 91784.7 6 5 328.1 359.68 HUMAN 1 -32.6943 -26.676 KNIYKRMTGSEFDFE-p P50395;T425-p KNIYKRMTGSEFDFE 0.369981209786921 0.187253365009126 0.204333333333333 -0.155666666666667 8.00701633835151 9.56936216301324 0.204333333333333 -0.155666666666667 0.158233475124416 0.110424078495956 1.6363777410367 -1.90624722478547 P50395 GDI2 P50395.T425.p_GDI2 P50395_T425t _1_1_425_425 P50395 P50395|P50395-2 Rab GDP dissociation inhibitor beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17350.17350.4 15.47 15.47 1.294 2 1 1 0 576.0255 2221.1146 T425t TMT10 423 (K) RMtGSEFDFEEMKR (K) RMT(0.99)GS(0.0)EFDFEEMKR K:TMT10,t:Phosphorylated T GDI2 51118.8 7 5 1810.1 113.37 HUMAN 1 8.007 -9.5694 KNKANYESPGKIFLR-p Q6P0N0;S110-p KNKANYESPGKIFLR 0.419598745385739 0.00278494099914611 -0.220333333333333 -0.886 6.96189916511393 38.6918197707389 -0.220333333333333 -0.886 0.201284384292108 0.000135150613954091 -1.45434220159562 -9.55824877455732 Q6P0N0 MIS18BP1 Q6P0N0.S110.p_MIS18BP1 Q6P0N0_S110s _1_1_110_110 Q6P0N0 Q6P0N0|G5E9K5|Q6P0N0-2 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7346.7346.2 11.81 6.33 5.08 2 1 1 0 702.3527 1323.7309 S110s TMT10 106 (K) ANYEsPGK (I) ANY(0.0)ES(0.99)PGK K:TMT10,s:Phosphorylated S MIS18BP1 129996 3 6 54.1 728.39 HUMAN 1 -6.9619 -38.6918 KNKEELKSLGPAAPI-p Q9H0L4;S103-p KNKEELKSLGPAAPI 0.396926015285751 0.217693020810424 0.136 0.133333333333333 7.40716662102262 8.71398764282501 0.136 0.133333333333333 0.181670050911663 0.134462516745113 1.53211401745957 1.75824310506116 Q9H0L4 CSTF2T Q9H0L4.S103.p_CSTF2T Q9H0L4_S103s _1_1_103_103 Q9H0L4 Q9H0L4 Cleavage stimulation factor subunit 2 tau variant HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30570.30570.3 20.41 20.41 7.293 5 1 1 0 1068.1772 3122.5731 S103s TMT10 103 (K) sLGPAAPIIDSPYGDPIDPEDAPESITR (A) S(0.99)LGPAAPIIDS(0.0)PY(0.0)GDPIDPEDAPES(0.0)IT(0.0)R s:Phosphorylated S CSTF2T 64663.7 1 2 2570.1 78.15 HUMAN 1 7.4072 8.714 KNKEESDSTERLQIS-p Q5TB30;S361-p KNKEESDSTERLQIS 0.245068690492062 0.00428566317397979 0.220333333333333 -0.575 11.6770193141184 34.8131124341526 0.220333333333333 -0.575 0.0679669949288278 0.000330132861751908 2.27517435369118 -8.02566629688263 Q5TB30 DEPDC1 Q5TB30.S361.p_DEPDC1 Q5TB30_S361s _1_1_361_361 Q5TB30 Q5TB30 DEP domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11910.11910.3 11.88 8.2 1.217 4 1 1 0 1001.493 2922.4957 S361s TMT10 355 (K) NKEESDsTERLQISNPGFQER (C) NKEES(0.0)DS(0.99)T(0.0)ERLQIS(0.0)NPGFQER K:TMT10,s:Phosphorylated S DEPDC1 93984.9 1 2 3115.1 60.32 HUMAN 1 11.677 -34.8131 KNKEQHLSENEPVDT-p O60934;S509-p KNKEQHLSENEPVDT 0.978997226104911 0.476930152373407 -0.00433333333333334 0.0936666666666667 0.182019955436913 4.28854940348458 -0.00433333333333334 0.0936666666666667 0.958954506595773 0.372516110399466 -0.0538925870290342 0.971726243392396 O60934 NBN O60934.S509.p_NBN O60934_S509s _1_1_509_509 O60934 O60934|A0A0C4DG07 Nibrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18720.18720.5 18.82 15.69 7.319 5 1 1 0 777.7827 3804.9131 S509s TMT10 503 (K) NKEQHLsENEPVDTNSDNNLFTDTDLK (S) NKEQHLS(0.99)ENEPVDT(0.0)NS(0.0)DNNLFT(0.0)DT(0.0)DLK K:TMT10,s:Phosphorylated S NBN 85642.2 4 10 562.1 271.59 HUMAN 1 -0.182 4.2885 KNKEVYMTPLRGVKA-p Q9BPX3;T931-p KNKEVYMTPLRGVKA 0.355077167170123 0.00288859795277366 0.138 -0.68 8.35518118895402 38.3884507991726 0.138 -0.68 0.146043381843584 0.00014492887468072 1.6967259171702 -9.42961270069094 Q9BPX3 NCAPG Q9BPX3.T931.p_NCAPG Q9BPX3_T931t _1_1_931_931 Q9BPX3 Q9BPX3 Condensin complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18060.18060.3 12.19 12.19 4.984 2 1 1 0 611.0027 1751.029 T931t TMT10 927 (K) EVYMtPLRGVK (A) EVY(0.0)MT(0.99)PLRGVK K:TMT10,t:Phosphorylated T NCAPG 115416.1 3 4 1123.1 174.85 HUMAN 1 8.3552 -38.3885 KNKGKGFSVVADTPE-p Q14847-2;S99-p KNKGKGFSVVADTPE 0.730031357534783 0.111712876108522 -0.0716666666666667 -0.195 2.59178509547872 12.5653841763017 -0.0716666666666667 -0.195 0.550581342554733 0.0553938540444063 -0.63620555917945 -2.4317571955275 Q14847 LASP1 Q14847.2.S99.p_LASP1 Q14847-2_S99s _1_1_99_99 Q14847-2 Q14847-2 Isoform 2 of LIM and SH3 domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21865.21865.3 13.16 13.16 6.159 2 1 1 0 576.6247 1647.8904 S99s TMT10 97 (K) GFsVVADTPELQR (I) GFS(0.99)VVADT(0.0)PELQR s:Phosphorylated S LASP1 36812.2 1 3 1322.1 154.29 HUMAN 1 -2.5918 -12.5654 KNKLEGDSDVDSELE-p Q92614;S1970-p KNKLEGDSDVDSELE 0.466667919827382 0.00786644970365133 -0.120333333333333 0.484 6.10882737934472 30.0122702819146 -0.120333333333333 0.484 0.244972459261076 0.000997178650685503 -1.30392716260015 6.42566711928563 Q92614 MYO18A Q92614.S1970.p_MYO18A Q92614_S1970s _1_1_1970_1970 Q92614 Q92614 Unconventional myosin-XVIIIa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18257.18257.4 14.74 14.74 4.749 2 1 1 0 772.3937 3006.5835 S1970s TMT10 1964 (K) NKLEGDsDVDSELEDRVDGVK (S) NKLEGDS(0.99)DVDS(0.0)ELEDRVDGVK K:TMT10,s:Phosphorylated S MYO18A 234309.1 1 10 783.1 225.59 HUMAN 1 -6.1088 30.0123 KNKPLEQSVEDLSKG-p O95466-2;S184-p KNKPLEQSVEDLSKG 0.492572262872537 0.343881984312331 0.102333333333333 -0.116333333333333 5.66333583541887 6.14210443715725 0.102333333333333 -0.116333333333333 0.271435356076107 0.243102573469971 1.22434905027416 -1.30952057135696 O95466 FMNL1 O95466.2.S184.p_FMNL1 O95466-2_S184s _1_1_184_184 O95466-2 O95466-3|O95466-2 Isoform 2 of Formin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15059.15059.3 15.7 15.7 4.562 2 1 1 0 752.0815 2174.2636 S184s TMT10 178 (K) NKPLEQsVEDLSK (G) NKPLEQS(0.99)VEDLS(0.0)K K:TMT10,s:Phosphorylated S FMNL1 123091.5 2 1 2364.1 86.46 HUMAN 1 5.6633 -6.1421 KNKQKPITPETAEKL-p P60953;T138-p KNKQKPITPETAEKL 0.636618897849995 0.345789626717724 0.068 0.0983333333333334 3.65950133523383 6.11239149851291 0.068 0.0983333333333334 0.430576047172679 0.244771500486649 0.851456419195504 1.30424481568528 P60953 CDC42 P60953.T138.p_CDC42 P60953_T138t _1_1_138_138 P60953 P60953|P60953-1 Cell division control protein 42 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9982.9982.3 14.46 14.46 1.383 2 1 1 0 670.3806 1929.1624 T138t TMT10 134 (K) QKPItPETAEK (L) QKPIT(0.99)PET(0.0)AEK K:TMT10,t:Phosphorylated T CDC42 21600.5 1 1 4748.1 27.1 HUMAN 1 3.6595 6.1124 KNLESVNSPIEKSSV-p Q5U623;S416-p KNLESVNSPIEKSSV 0.629430573046814 0.214363699623586 -0.0736666666666667 -0.122666666666667 3.73723340706634 8.8011575582511 -0.0736666666666667 -0.122666666666667 0.422937953293939 0.131790542034177 -0.866556038982216 -1.77332041699898 Q5U623 ATF7IP2 Q5U623.S416.p_ATF7IP2 Q5U623_S416s _1_1_416_416 Q5U623 Q5U623|Q5U623-2 Activating transcription factor 7-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15188.15188.3 13.16 13.16 4.759 2 1 1 0 589.9823 1687.9631 S416s TMT10 410 (K) NLESVNsPIEK (S) NLES(0.0)VNS(0.99)PIEK K:TMT10,s:Phosphorylated S ATF7IP2 76847 2 2 2630.1 76.18 HUMAN 1 -3.7372 -8.8012 KNLFINPSPLPDLSW-p O96020;S100-p KNLFINPSPLPDLSW 0.965110779182277 0.0272025018745636 -0.00733333333333333 -0.473333333333333 0.297324086459863 21.2350116974156 -0.00733333333333332 -0.473333333333333 0.933829504361038 0.00752486703400992 -0.0869614618963899 -4.14496585996466 O96020 CCNE2 O96020.S100.p_CCNE2 O96020_S100s_1_1_100_100 O96020 O96020|Q8WUE3|O96020-2 G1/S-specific cyclin-E2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.34056.34056.3 12.34 12.34 3.893 3 1 1 0 862.1082 2503.3419 N98n S100s TMT10 94 (K) NLFInPsPLPDLSWGCSK (E) N(0.0)LFIN(0.99)PS(0.99)PLPDLS(0.0)WGCS(0.0)K C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S CCNE2 47327 2 3 1638.1 124.86 HUMAN 1 -0.2973 -21.235 KNLPPASSPGYGMTT-p Q15648;S545-p KNLPPASSPGYGMTT 0.89884077146274 0.113581659249016 -0.0193333333333333 0.188666666666667 0.905873811001561 12.4588448126115 -0.0193333333333333 0.188666666666667 0.811731910080553 0.0567695587656865 -0.250098303870066 2.41273699487854 Q15648 MED1 Q15648.S545.p_MED1 Q15648_S545s_1_1_545_545 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36994.36994.5 22.36 22.36 0 15 1 1 0 1029.4937 5046.4761 S545s N555n M557m TMT10 539 (K) NLPPASsPGYGMTTGNnPmSGTTTPTNTFPGGPITTLFNMSMSIK (D) N(0.0)LPPAS(0.0)S(0.99)PGY(0.0)GM(0.50)T(0.0)T(0.0)GN(0.50)N(0.50)PM(0.50)S(0.0)GT(0.0)T(0.0)T(0.0)PT(0.0)N(0.0)T(0.0)FPGGPIT(0.0)T(0.0)LFN(0.0)M(0.0)S(0.0)M(0.0)S(0.0)IK K:TMT10,s:Phosphorylated S,n:Deamidated,m:Oxidized methionine MED1 169445 24 1 115.1 566.87 HUMAN 1 -0.9059 12.4588 KNMAKGESLMGEVAT-p Q9UM47;S1712-p KNMAKGESLMGEVAT 0.817235134117692 0.546607100352311 -0.034 -0.088 1.68437515720492 3.52767103860667 -0.034 -0.088 0.678519735754277 0.443846598710392 -0.437711853520191 -0.825565373003459 Q9UM47 NOTCH3 Q9UM47.S1712.p_NOTCH3 Q9UM47_S1712s _1_1_1712_1712 Q9UM47 Q9UM47 Neurogenic locus notch homolog protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.32333.32333.3 15.38 15.38 3.552 3 1 1 0 965.4283 2814.3036 S1712s TMT10 1710 (K) GEsLMGEVATDWMDTECPEAK (R) GES(0.99)LMGEVAT(0.0)DWMDT(0.0)ECPEAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NOTCH3 256806.8 2 12 1083.2 179.88 HUMAN 1 -1.6844 -3.5277 KNMDSLPSGKIHRKV-p Q9UBU7;S571-p KNMDSLPSGKIHRKV 0.9425509765566 0.00593462567494232 -0.0146666666666667 -0.515 0.505820300983604 32.1729086982007 -0.0146666666666667 -0.515 0.890057306967415 0.000606330102458837 -0.14486908020451 -7.1091067532494 Q9UBU7 DBF4 Q9UBU7.S571.p_DBF4 Q9UBU7_S571s _1_1_571_571 Q9UBU7 Q9UBU7 Protein DBF4 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13067.13067.3 9.28 9.28 3.263 2 1 1 0 496.2509 1406.7714 S571s TMT10 565 (K) NMDSLPsGK (I) NMDS(0.0)LPS(0.99)GK K:TMT10,s:Phosphorylated S DBF4 77598.3 1 7 880.1 207.32 HUMAN 1 -0.5058 -32.1729 KNMQDGASDGEMPKF-p Q9BW62;S174-p KNMQDGASDGEMPKF 0.450399926319744 0.307082763771933 -0.139 0.140333333333333 6.39892693432641 6.77578443570655 -0.139 0.140333333333333 0.229143375601427 0.210097824978591 -1.35533145689415 1.42132536939777 Q9BW62 KATNAL1 Q9BW62.S174.p_KATNAL1 Q9BW62_S174s _1_1_174_174 Q9BW62 Q9BW62 Katanin p60 ATPase-containing subunit A-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17539.17539.4 16.12 16.12 9.455 2 1 1 0 750.8469 2920.406 S174s TMT10 168 (K) NMQDGAsDGEMPKFDGAGYDK (D) NMQDGAS(0.99)DGEMPKFDGAGY(0.0)DK K:TMT10,s:Phosphorylated S KATNAL1 55733.7 2 1 5806.1 16.12 HUMAN 1 -6.3989 6.7758 KNMQFSNTPDSGVSL-p Q9NZM3;T573-p KNMQFSNTPDSGVSL 0.179658679373764 0.0279591621584575 0.236666666666667 -0.347666666666667 14.7195249345404 21.0535838480742 0.236666666666667 -0.347666666666667 0.0337324205815316 0.0078458791641133 2.82601149361586 -4.10469646563452 Q9NZM3 ITSN2 Q9NZM3.T573.p_ITSN2 Q9NZM3_T573t _1_1_573_573 Q9NZM3 Q9NZM3|A0A087WVF7|Q9NZM3-2|Q9NZM3-3|Q9NZM3-4 Intersectin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18472.18472.4 20.71 20.71 2.616 4 1 1 0 693.3693 2690.4903 T573t TMT10 567 (K) NMQFSNtPDSGVSLLHKK (S) NMQFS(0.0)NT(0.99)PDS(0.0)GVS(0.0)LLHKK K:TMT10,t:Phosphorylated T ITSN2 194542 1 5 1476.1 139.1 HUMAN 1 14.7195 -21.0536 KNNNYRISKSRYDSI-p E1CEI4;S287-p KNNNYRISKSRYDSI 0.950466896477293 0.812816541987435 -0.014 -0.0343333333333333 0.436553211425044 1.25977675244869 -0.014 -0.0343333333333333 0.904366941967639 0.748207960889761 -0.125886389233711 -0.337794081455092 E1CEI4 GCLC E1CEI4.S287.p_GCLC E1CEI4_S287s _1_1_287_287 E1CEI4 P48506|E1CEI4 Glutamate--cysteine ligase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7657.7657.3 10.19 10.19 10.191 2 1 1 0 516.2765 1466.848 S287s TMT10 281 (K) NNNYRIsK (S) NNNY(0.0)RIS(0.99)K K:TMT10,s:Phosphorylated S GCLC 69370.5 1 1 3953.1 40.31 HUMAN 1 -0.4366 -1.2598 KNNTAAETEDDESDG-p Q6KC79-2;T2667-p KNNTAAETEDDESDG 0.150283451076775 0.952228632282318 0.437333333333333 -0.00866666666666664 16.6004191564377 0.302987122902787 0.437333333333333 -0.00866666666666663 0.0218755048377719 0.932612619423699 3.18434296036539 -0.0885574659142127 Q6KC79 NIPBL Q6KC79.2.T2667.p_NIPBL Q6KC79-2_T2667tS2672s_2_2_2667_2672 Q6KC79-2 Q6KC79-2 Isoform 2 of Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4064.4064.3 16.2 16.2 4.557 5 2 2 0 976.7186 2768.204 T2667t S2672s TMT10 2661 (K) NNTAAEtEDDEsDGEDRGGGTSGVR (R) NNT(0.0)AAET(0.99)EDDES(0.99)DGEDRGGGT(0.0)S(0.0)GVR t:Phosphorylated T,s:Phosphorylated S NIPBL 306278.3 8 44 50.2 752.87 HUMAN 1 16.6004 -0.303 KNPASNDSCPALEKE-p Q9HDC5;S625-p KNPASNDSCPALEKE 0.188976778117262 0.950652661757648 -0.317 0.00666666666666669 14.1703090537666 0.314242558217282 -0.317 0.0066666666666667 0.0382797501612363 0.930198734164793 -2.72424142861932 0.0917400538873151 Q9HDC5 JPH1 Q9HDC5.S625.p_JPH1 Q9HDC5_S625s _1_1_625_625 Q9HDC5 Q9HDC5 Junctophilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12489.12489.2 16.56 11.21 2.411 2 1 1 0 970.9631 1860.9526 S625s TMT10 619 (K) NPASNDsCPALEK (E) NPAS(0.0)NDS(0.99)CPALEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S JPH1 72141.1 4 12 675.1 247.46 HUMAN 1 -14.1703 0.3142 KNPKIPMSKMMTVLG-p Q8TDI0;S182-p KNPKIPMSKMMTVLG 0.126867028860092 0.530785724898093 -0.312 -0.127 18.593986093204 3.69854301373876 -0.312 -0.127 0.0138229708023286 0.426722653193281 -3.58349014140858 -0.858911008063528 Q8TDI0 CHD5 Q8TDI0.S182.p_CHD5 Q8TDI0_S182s_1_1_182_182 Q8TDI0 Q8TDI0|F2Z2R5 Chromodomain-helicase-DNA-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26201.26201.4 7.55 2.88 3.099 2 1 1 0 633.3507 2433.4363 N176n S182s M185m Hydrogen 176 (K) nPKIPMsKMmTVLGAK (W) N(1.0)PKIPM(0.0)S(0.99)KM(0.0)M(0.99)T(0.0)VLGAK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S,m:Oxidized methionine CHD5 224643 1 1 1884.1 109.13 HUMAN 1 -18.594 -3.6985 KNPKTGIYEEKHAKR-p P27824-2;Y249-p KNPKTGIYEEKHAKR 0.815216209821521 0.390742774671189 0.043 -0.085 1.70293185328542 5.42592429005937 0.043 -0.085 0.67562671650363 0.286686716777771 0.441960677723207 -1.18131364521439 P27824 CANX P27824.2.Y249.p_CANX P27824-2_Y249y _1_1_249_249 P27824-2 P27824-2|P27824-3 Isoform 2 of Calnexin GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11638.11638.2 10.28 2.81 5.768 2 1 1 0 689.3561 1297.7404 Y249y TMT10 246 (K) TGIyEEK (H) T(0.0)GIY(0.99)EEK K:TMT10,y:Phosphorylated Y CANX 72015 2 1 336.1 10.28 HUMAN 1 1.7029 -5.4259 KNPNPSPTPPRADLQ-p Q92831;T119-p KNPNPSPTPPRADLQ 0.991883667014353 0.0575538396354817 -0.00233333333333334 0.34 0.0747872844929543 16.5180502043246 -0.00233333333333334 0.34 0.982927015149379 0.0222943584554939 -0.0224061415607573 3.16597678996865 Q92831 KAT2B Q92831.T119.p_KAT2B Q92831_T119t _1_1_119_119 Q92831 Q92831 Histone acetyltransferase KAT2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32743.32743.4 23.89 23.89 3.734 5 1 1 0 775.643 3019.5832 T119t TMT10 113 (K) NPNPSPtPPRADLQQIIVSLTESCR (S) NPNPS(0.0)PT(0.99)PPRADLQQIIVS(0.0)LT(0.0)ES(0.0)CR C:Carbamidomethylation,t:Phosphorylated T KAT2B 94095.4 3 1 3007.1 63.41 HUMAN 1 -0.0748 16.5181 KNPYAHISIPRAHLR-p B8A4K4;S56-p KNPYAHISIPRAHLR 0.131133770128844 0.102252084063068 -0.308333333333333 -0.484333333333333 18.2414177656732 13.0825599584907 -0.308333333333333 -0.484333333333333 0.0149919533937598 0.0491749587345632 -3.51128937836472 -2.52455882413766 B8A4K4 CYSRT1 B8A4K4.S56.p_CYSRT1 B8A4K4_S56s _1_1_56_56 B8A4K4 B8A4K4|A8MQ03 Cysteine-rich tail protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15286.15286.3 16.08 16.08 6.342 2 1 1 0 492.9238 1396.7899 S56s TMT10 50 (K) NPYAHIsIPR (A) NPY(0.0)AHIS(0.99)IPR s:Phosphorylated S CYSRT1 20690.1 1 1 5811.1 16.08 HUMAN 1 -18.2414 -13.0826 KNQEEEKSGKWEGLV-p Q9Y2W1;S468-p KNQEEEKSGKWEGLV 0.252409750747624 0.988759977836028 -0.444 -0.00266666666666668 11.4026704990787 0.0746502792747689 -0.444 -0.0026666666666667 0.0723990637611313 0.98295802366087 -2.22681032503478 -0.0223633982478404 Q9Y2W1 THRAP3 Q9Y2W1.S468.p_THRAP3 Q9Y2W1_S468s _1_1_468_468 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19525.19525.4 18.39 13.53 5.043 2 1 1 0 811.439 3162.7605 S468s TMT10 462 (K) NQEEEKsGKWEGLVYAPPGK (E) NQEEEKS(0.99)GKWEGLVY(0.0)APPGK K:TMT10,s:Phosphorylated S THRAP3 108720.9 5 71 10.2 1293.04 HUMAN 1 -11.4027 -0.0747 KNQKHPESIQGSKEK-p Q641Q2;S921-p KNQKHPESIQGSKEK 0.637478023238816 0.335709039269514 -0.165333333333333 0.184333333333333 3.64723653916966 6.28291944611359 -0.165333333333333 0.184333333333333 0.431793744269368 0.235346668744263 -0.849067879878506 1.33447921144166 Q641Q2 FAM21A Q641Q2.S921.p_FAM21A Q641Q2_S921s _1_1_921_921 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5709.5709.3 10.63 10.63 4.594 2 1 1 0 507.6009 1440.8211 S921s TMT10 918 (K) HPEsIQGSK (E) HPES(0.99)IQGS(0.0)K K:TMT10,s:Phosphorylated S WASHC2A 147352.2 1 51 12.1 1178.3 HUMAN 1 -3.6472 6.2829 KNQLKHMSVSSIKQA-p P15927;S238-p KNQLKHMSVSSIKQA 0.0949352610946194 0.0735578766149451 -0.914666666666667 0.517333333333333 21.6786845934719 15.0474061504123 -0.914666666666667 0.517333333333333 0.00679409383379768 0.0312794699426322 -4.24883689714479 2.88545678833361 P15927 RPA2 P15927.S238.p_RPA2 P15927_S238s _1_1_238_238 P15927 P15927-3|P15927-2 Replication protein A 32 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12427.12427.3 7.87 6.26 2.43 3 1 1 0 476.2565 1346.7866 S238s TMT10 236 (K) HMsVSSIK (Q) HMS(0.99)VS(0.0)S(0.0)IK K:TMT10,s:Phosphorylated S RPA2 29360.4 1 4 2718.1 72.93 HUMAN 1 -21.6787 15.0474 KNQSEEQSEASSEQL-p Q9Y6X4;S615-p KNQSEEQSEASSEQL 0.602237420040442 0.0133746183471685 -0.103333333333333 0.538333333333333 4.06874281212319 26.0580160427035 -0.103333333333333 0.538333333333334 0.391855294258854 0.00247855405967545 -0.930247244378697 5.30983209247679 Q9Y6X4 FAM169A Q9Y6X4.S615.p_FAM169A Q9Y6X4_S615sS618sS619s_3_3_615_619 Q9Y6X4 Q9Y6X4|D6RB01 Soluble lamin-associated protein of 75 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20844.20844.3 16.28 16.28 5.398 6 3 3 0 1100.1233 3058.4489 S615s S618s S619s TMT10 609 (K) NQSEEQsEAssEQLDQFTQSAEK (A) NQS(0.0)EEQS(0.99)EAS(0.99)S(0.99)EQLDQFT(0.0)QS(0.0)AEK K:TMT10,s:Phosphorylated S FAM169A 75295.8 2 18 731.1 236 HUMAN 1 -4.0687 26.058 KNQTYSFSPSKSYSR-p Q86YS7-3;S295-p KNQTYSFSPSKSYSR 0.359061198491431 0.0177284863567398 -0.197 -0.442333333333333 8.26626370469919 24.1264988022709 -0.197 -0.442333333333333 0.14906429469046 0.0038667858419274 -1.68132147522912 -4.82014965652264 Q86YS7 C2CD5 Q86YS7.3.S295.p_C2CD5 Q86YS7-3_S295s _1_1_295_295 Q86YS7-3 Q86YS7-3 Isoform 3 of C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14105.14105.3 14.31 14.31 1.697 5 1 1 0 566.2829 1616.8684 S295s TMT10 289 (K) NQTYSFsPSK (S) NQT(0.0)Y(0.0)S(0.0)FS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S C2CD5 117622.7 5 5 349.1 351.16 HUMAN 1 -8.2663 -24.1265 KNQVNSESDSDSEES-p P46100;S1324-p KNQVNSESDSDSEES 0.335011871726365 0.961050637830868 -0.161 0.00566666666666669 8.85987741273936 0.247279199734572 -0.161 0.00566666666666668 0.130020627812575 0.944652503846488 -1.78410724622239 0.072698545826413 P46100 ATRX P46100.S1324.p_ATRX P46100_S1322sS1324sS1326s_3_3_1322_1326 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7994.7994.4 7.16 7.16 7.159 5 3 3 0 741.5819 2723.4051 S1322s S1324s S1326s TMT10 1318 (K) NQVNsEsDsDSEESKKPR (Y) NQVNS(0.99)ES(0.99)DS(0.99)DS(0.0)EES(0.0)KKPR K:TMT10,s:Phosphorylated S ATRX 285034.2 2 65 18.1 1035.36 HUMAN 1 -8.8599 0.2473 KNRMDGTYACSYTPV-p O75369-8;Y704-p KNRMDGTYACSYTPV 0.390105099545893 0.589764892097412 0.569 0.183666666666667 7.56035058735349 3.10113881368019 0.569 0.183666666666667 0.175373892428756 0.489650405649148 1.55878613795379 0.740774922152367 O75369 FLNB O75369.8.Y704.p_FLNB O75369-8_Y704y _1_1_704_704 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6 Isoform 8 of Filamin-B GG20160819_MSz_CCLE_T4D7_pY_Injection_02.14749.14749.2 13.9 12.42 1.568 5 1 1 0 901.394 1721.8076 Y704y Hydrogen 700 (R) MDGTyACSYTPVK (A) MDGT(0.0)Y(0.99)ACS(0.0)Y(0.0)T(0.0)PVK C:Carbamidomethylation,K:TMT10-Lys-Only,y:Phosphorylated Y FLNB 283797.6 2 2 37.1 53.72 HUMAN 1 7.5604 3.1011 KNRPDYVSEEEEDDE-p P49792;S2668-p KNRPDYVSEEEEDDE 0.434470199873184 0.0232818080557298 0.129333333333333 0.334 6.66954424161826 22.2853157296624 0.129333333333333 0.334 0.215300766432843 0.00590838010420076 1.40303542916439 4.38276813291467 P49792 RANBP2 P49792.S2668.p_RANBP2 P49792_S2668s _1_1_2668_2668 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.39797.39797.3 22.92 22.92 8.25 3 1 1 0 1018.7836 2974.3842 S2668s TMT10 2662 (K) NRPDYVsEEEEDDEDFETAVK (K) NRPDY(0.0)VS(0.99)EEEEDDEDFET(0.0)AVK K:TMT10,s:Phosphorylated S RANBP2 362585.9 18 61 9.1 1298.62 HUMAN 1 6.6695 22.2853 KNRPTSISWDGLDSG-p P30086;S54-p KNRPTSISWDGLDSG 0.829556220673555 0.0107326901308278 0.0326666666666667 0.446 1.5616293971124 27.6076057559354 0.0326666666666667 0.446 0.697970488599338 0.00173476009887178 0.409373990679773 5.72785034540742 P30086 PEBP1 P30086.S54.p_PEBP1 P30086_S54s _1_1_54_54 P30086 P30086 Phosphatidylethanolamine-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17370.17370.3 8.66 8.66 1.536 4 1 1 0 724.3685 2091.1235 S54s TMT10 48 (K) NRPTSIsWDGLDSGK (L) NRPT(0.0)S(0.0)IS(0.99)WDGLDS(0.0)GK K:TMT10,s:Phosphorylated S PEBP1 21170.5 2 3 3531.1 48.91 HUMAN 1 1.5616 27.6076 KNRQKSASTLCLPSV-p Q8IUC4;S654-p KNRQKSASTLCLPSV 0.560108690015517 0.251400932407335 0.1 -0.152333333333333 4.64516800799938 7.8964502622326 0.1 -0.152333333333333 0.34314936471336 0.162313623761596 1.0386125981212 -1.61668677491504 Q8IUC4 RHPN2 Q8IUC4.S654.p_RHPN2 Q8IUC4_S654s _1_1_654_654 Q8IUC4 Q8IUC4|A8MT19|Q8IUC4-2 Rhophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18982.18982.3 17.92 17.92 1.103 4 1 1 0 794.0982 2300.3161 S654s TMT10 652 (K) SAsTLCLPSVGAARPQVK (K) S(0.0)AS(0.99)T(0.0)LCLPS(0.0)VGAARPQVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RHPN2 77619.5 8 4 1611.1 127.64 HUMAN 1 4.6452 -7.8965 KNRRDRNSWGGFSEK-p Q8WXF7;S10-p KNRRDRNSWGGFSEK 0.20055874973276 0.183669890211405 -0.22 -0.152666666666667 13.5685960817651 9.67807447938063 -0.22 -0.152666666666667 0.0439683726439779 0.107694258914702 -2.61404743935141 -1.92508078822675 Q8WXF7 ATL1 Q8WXF7.S10.p_ATL1 Q8WXF7_S10s _1_1_10_10 Q8WXF7 Q8WXF7 Atlastin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13178.13178.3 13.75 13.75 4.501 2 1 1 0 607.6296 1740.907 S10s TMT10 7 (R) DRNsWGGFSEK (T) DRNS(0.99)WGGFS(0.0)EK K:TMT10,s:Phosphorylated S ATL1 63884.7 1 1 5411.1 19.59 HUMAN 1 -13.5686 -9.6781 KNRSSVKTPEPVVPT-p Q14676;T1239-p KNRSSVKTPEPVVPT 0.125743941781331 0.0163071510088123 0.282666666666667 0.697 18.7231276983659 24.6886675923496 0.282666666666667 0.697 0.0134179827792602 0.00339729484997771 3.61011978350432 4.95926600909462 Q14676 MDC1 Q14676.T1239.p_MDC1 Q14676_T1239t _1_1_1239_1239 Q14676 Q14676|Q14676-2 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20131.20131.3 24.13 26.1 1.139 13 1 1 0 1455.4042 4284.2287 T1239t TMT10 1235 (R) SSVKtPEPVVPTAPELQPSTSTDQPVTSEPTYQATR (G) S(0.0)S(0.0)VKT(0.99)PEPVVPT(0.0)APELQPS(0.0)T(0.0)S(0.0)T(0.0)DQPVT(0.0)S(0.0)EPT(0.0)Y(0.0)QAT(0.0)R K:TMT10,t:Phosphorylated T MDC1 227803.2 11 33 6.1 1662.62 HUMAN 1 18.7231 24.6887 KNSDDRDSKRDSLEE-p P21127;S43-p KNSDDRDSKRDSLEE 0.565909189704471 0.389864545921507 0.100333333333333 0.149 4.55411223748598 5.44062598978433 0.100333333333333 0.149 0.350419912022689 0.285717868145897 1.02167375410954 1.18396982301884 P21127 CDK11B P21127.S43.p_CDK11B P21127_S43sS47s_2_2_43_47 P21127 P21127|J3QR44|A0A0D9SEN2|A0A0D9SER5|P21127-2 Cyclin-dependent kinase 11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5423.5423.5 7.29 3.22 1.442 3 2 2 0 630.2919 2987.4931 S43s S47s TMT10 37 (K) NSDDRDsKRDsLEEGELRDHR (M) NS(0.0)DDRDS(0.99)KRDS(0.99)LEEGELRDHR K:TMT10,s:Phosphorylated S CDK11B 92876.5 1 10 421.1 320.22 HUMAN 1 4.5541 5.4406 KNSDLLTSPDVGLLK-p P05412;S63-p KNSDLLTSPDVGLLK 0.06600969777365 0.0323164429347562 -0.486666666666667 -0.317 25.4345152307339 20.1139366019976 -0.486666666666667 -0.317 0.00286120171657245 0.00974106272322772 -5.15467463876432 -3.8997694233841 P05412 JUN P05412.S63.p_JUN P05412_S63s _1_1_63_63 P05412 P05412 Transcription factor AP-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27123.27123.3 7.97 7.97 2.196 3 1 1 0 670.7023 1930.1261 S63s TMT10 57 (K) NSDLLTsPDVGLLK (L) NS(0.0)DLLT(0.0)S(0.99)PDVGLLK K:TMT10,s:Phosphorylated S JUN 35846.1 3 1 1749.2 117.66 HUMAN 1 -25.4345 -20.1139 KNSGFRRSDDMFTFH-p P49792;S1128-p KNSGFRRSDDMFTFH 0.790053523868569 0.621867543902399 -0.0396666666666667 0.0476666666666667 1.97447802256181 2.80502764737104 -0.0396666666666667 0.0476666666666667 0.634676177966472 0.524200263916713 -0.503142568270829 0.680433147483451 P49792 RANBP2 P49792.S1128.p_RANBP2 P49792_S1128s _1_1_1128_1128 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16971.16971.3 14.63 14.63 3.875 2 1 1 0 549.908 1567.7412 S1128s Hydrogen 1128 (R) sDDMFTFHGPGK (S) S(0.99)DDMFT(0.0)FHGPGK K:TMT10-Lys-Only,s:Phosphorylated S RANBP2 362585.9 2 17 9.1 1298.62 HUMAN 1 -1.9745 2.805 KNSGGFLSKDKGLLG-p A0FGR8-6;S903-p KNSGGFLSKDKGLLG 0.334770198107144 0.540274545141159 -0.155666666666667 -0.0586666666666667 8.87093445038525 3.59693096236245 -0.155666666666667 -0.0586666666666667 0.129690019323299 0.436824414790563 -1.78602119830934 -0.839121426460982 A0FGR8 ESYT2 A0FGR8.6.S903.p_ESYT2 A0FGR8-6_S903s _1_1_903_903 A0FGR8-6 A0FGR8-6|A0A087WXU3 Isoform 6 of Extended synaptotagmin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15714.15714.2 8.62 8.62 8.623 2 1 1 0 674.3577 1267.7411 S903s TMT10 897 (K) NSGGFLsK (D) NS(0.0)GGFLS(0.99)K K:TMT10,s:Phosphorylated S ESYT2 105219.8 1 7 1886.1 109.02 HUMAN 1 -8.8709 -3.5969 KNSITEISDNEDDLL-p Q86UU1;S583-p KNSITEISDNEDDLL 0.431645876266157 0.0827920785965693 0.176666666666667 -0.226 6.71851698076966 14.32754735813 0.176666666666667 -0.226 0.212886588230852 0.0369186034442649 1.41164543615521 -2.75155995630949 Q86UU1 PHLDB1 Q86UU1.S583.p_PHLDB1 Q86UU1_S583s _1_1_583_583 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17451.17451.4 22.9 22.9 4.575 4 1 1 0 708.0989 2749.4045 S583s TMT10 576 (R) KNSITEIsDNEDDLLEYHR (R) KNS(0.0)IT(0.0)EIS(0.99)DNEDDLLEY(0.0)HR K:TMT10,s:Phosphorylated S PHLDB1 152129.1 10 19 99.1 600.41 HUMAN 1 6.7185 -14.3275 KNSPTFKSFEEKVEN-p P55327;S176-p KNSPTFKSFEEKVEN 0.404766243702161 0.0788076630002883 -0.252333333333333 -0.323333333333333 7.25255944832574 14.6480167392049 -0.252333333333333 -0.323333333333333 0.188253931665901 0.0342924351546471 -1.50515400855851 -2.81091172171888 P55327 TPD52 P55327.S176.p_TPD52 P55327_S176s _1_1_176_176 P55327 H0YC42|P55327-3|P55327-6|P55327-5|P55327-7|P55327-4|P55327-2|E5RK35 Tumor protein D52 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26186.26398.5 12.49 12.49 2.406 3 1 1 0 579.5241 2813.6219 S176s TMT10 170 (K) NSPTFKsFEEKVENLK (S) NS(0.0)PT(0.0)FKS(0.99)FEEKVENLK K:TMT10,s:Phosphorylated S TPD52 24383.6 13 6 1260.1 161.11 HUMAN 1 -7.2526 -14.648 KNSQSFFSGLFGGSS-p P54920;S29-p KNSQSFFSGLFGGSS 0.21300200203599 0.504882460305642 -0.198 -0.102333333333333 12.9585189764246 3.97741633921164 -0.198 -0.102333333333333 0.0505997186875089 0.400182751632663 -2.50359494465784 -0.912656318638135 P54920 NAPA P54920.S29.p_NAPA P54920_S29s _1_1_29_29 P54920 P54920|M0R0Y2 Alpha-soluble NSF attachment protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.31279.31279.3 14.74 14.74 4.239 5 1 1 0 696.6796 2008.054 S29s TMT10 23 (K) NSQSFFsGLFGGSSK (I) NS(0.0)QS(0.0)FFS(0.99)GLFGGS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S NAPA 33688.6 1 1 4259.1 34.55 HUMAN 1 -12.9585 -3.9774 KNSRRMLSNKPQDFQ-p Q9NZM1;S193-p KNSRRMLSNKPQDFQ 0.289230031078378 0.206494358985813 0.39 -0.421666666666667 10.1596823741439 9.01207016240879 0.39 -0.421666666666667 0.096389951685533 0.125543139141193 2.00946690825281 -1.80980035234718 Q9NZM1 MYOF Q9NZM1.S193.p_MYOF Q9NZM1_S193s _1_1_193_193 Q9NZM1 Q9NZM1|Q9NZM1-3|Q9NZM1-6|Q9NZM1-2|Q9NZM1-5 Myoferlin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16535.16535.3 11.31 11.31 99 1 1 1 0 595.9698 1705.9257 S193s Hydrogen 191 (R) MLsNKPQDFQIR (V) MLS(1.0)NKPQDFQIR K:TMT10-Lys-Only,s:Phosphorylated S MYOF 236244.8 1 2 829.1 216.58 HUMAN 1 10.1597 -9.0121 KNTFTAWSDEESDYE-p Q6PKG0;S627-p KNTFTAWSDEESDYE 0.529487485072084 0.155747705674919 0.0936666666666667 -0.19 5.10868226534841 10.619653720643 0.0936666666666667 -0.19 0.308412359189374 0.0867031004651678 1.12393790734022 -2.08869744747443 Q6PKG0 LARP1 Q6PKG0.S627.p_LARP1 Q6PKG0_S627s _1_1_627_627 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20525.20525.4 22.72 22.72 3.698 5 1 1 0 797.6098 3107.4482 S627s TMT10 621 (K) NTFTAWsDEESDYEIDDRDVNK (I) NT(0.0)FT(0.0)AWS(0.99)DEES(0.0)DY(0.0)EIDDRDVNK K:TMT10,s:Phosphorylated S LARP1 123907.4 8 49 28.1 931.95 HUMAN 1 5.1087 -10.6197 KNTFTDWSDNDSDYE-p Q659C4;S432-p KNTFTDWSDNDSDYE 0.918430174900821 0.340011292838934 -0.0173333333333333 0.118666666666667 0.719747407026413 6.20636705500145 -0.0173333333333334 0.118666666666667 0.847276691744685 0.239531864213137 -0.202023042651138 1.32091964020258 Q659C4 LARP1B Q659C4.S432.p_LARP1B Q659C4_S432sS436s_2_2_432_436 Q659C4 Q659C4|Q659C4-2 La-related protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26367.26573.3 17.32 17.32 2.003 5 2 2 0 1090.1155 3108.3958 S432s S436s TMT10 426 (K) NTFTDWsDNDsDYEIDDQDLNK (I) NT(0.0)FT(0.0)DWS(0.99)DNDS(0.99)DY(0.0)EIDDQDLNK K:TMT10,s:Phosphorylated S LARP1B 105833.8 3 14 551.1 274.41 HUMAN 1 -0.7197 6.2064 KNTKKRHSFTSLTMA-p Q7Z6J0;S304-p KNTKKRHSFTSLTMA 0.264067193420481 0.254431397695122 -0.161 -0.115333333333333 10.9682479105825 7.8302966978999 -0.161 -0.115333333333333 0.0800157000036594 0.164804979750527 -2.15054756090616 -1.60520972161024 Q7Z6J0 SH3RF1 Q7Z6J0.S304.p_SH3RF1 Q7Z6J0_S304s _1_1_304_304 Q7Z6J0 Q7Z6J0|Q7Z6J0-3 E3 ubiquitin-protein ligase SH3RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12480.12480.3 8.32 8.32 1.125 4 1 1 0 515.9159 1465.7671 S304s Hydrogen 303 (R) HsFTSLTMANK (S) HS(0.99)FT(0.0)S(0.0)LT(0.0)MANK K:TMT10-Lys-Only,s:Phosphorylated S SH3RF1 94268.4 2 2 2961.1 64.64 HUMAN 1 -10.9682 -7.8303 KNTPASASLEGLAQT-p Q96Q45-3;S73-p KNTPASASLEGLAQT 0.934653033486175 0.195191707515082 -0.0163333333333333 -0.19 0.577254153855205 9.32908242409533 -0.0163333333333333 -0.19 0.875537162526663 0.116705616624461 -0.164194255219137 -1.86464719017556 Q96Q45 TMEM237 Q96Q45.3.S73.p_TMEM237 Q96Q45-3_S73s _1_1_73_73 Q96Q45-3 Q96Q45-3|Q96Q45-5|Q96Q45-2 Isoform 3 of Transmembrane protein 237 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16965.16965.3 20.26 20.26 3.73 4 1 1 0 651.6586 1872.9977 S73s TMT10 67 (K) NTPASAsLEGLAQTAGR (R) NT(0.0)PAS(0.0)AS(0.99)LEGLAQT(0.0)AGR s:Phosphorylated S TMEM237 48471.6 5 1 2351.1 87.06 HUMAN 1 -0.5773 -9.3291 KNTPREVSPLLPKLP-p Q15911;S3432-p KNTPREVSPLLPKLP 0.78149643092872 0.446982201163608 -0.054 -0.0796666666666667 2.05518092190784 4.66029080352178 -0.054 -0.0796666666666667 0.622991193817443 0.341956544341862 -0.520987866254011 -1.0412213788766 Q15911 ZFHX3 Q15911.S3432.p_ZFHX3 Q15911_S3432s _1_1_3432_3432 Q15911 Q15911|Q15911-2 Zinc finger homeobox protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24120.24120.3 14.87 14.87 6.886 2 1 1 0 920.5091 2679.5424 S3432s TMT10 3430 (R) EVsPLLPKLPEEPEAESK (S) EVS(0.99)PLLPKLPEEPEAES(0.0)K K:TMT10,s:Phosphorylated S ZFHX3 409090.1 1 17 529.1 281.73 HUMAN 1 -2.0552 -4.6603 KNTSDFVYLKVAKPT-p Q12959-2;Y399-p KNTSDFVYLKVAKPT 0.0732853965819104 0.450525122352267 -0.483333333333333 -0.0883333333333333 24.3984977817975 4.61538480551579 -0.483333333333333 -0.0883333333333333 0.00363203664656214 0.345510714332997 -4.89303021880648 -1.03288361155421 Q12959 DLG1 Q12959.2.Y399.p_DLG1 Q12959-2_Y399y _1_1_399_399 Q12959-2 Q12959-2|Q12959-7|Q12959-9|Q12959-8|E7EQD7|B4E2H8 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21050.21050.3 12.63 8.06 11.868 3 1 1 0 542.2855 1544.8725 Y399y TMT10 393 (K) NTSDFVyLK (V) NT(0.0)S(0.0)DFVY(0.99)LK K:TMT10,y:Phosphorylated Y DLG1 103604.4 2 13 196.1 460.79 HUMAN 1 -24.3985 -4.6154 KNTSRQESFEAEKDH-p Q92610;S78-p KNTSRQESFEAEKDH 0.179905397791605 0.00532559373117816 -0.405333333333333 0.522666666666667 14.707994948442 33.0141375297506 -0.405333333333333 0.522666666666667 0.0338220950075929 0.000499558378212808 -2.82386268277755 7.39095751653816 Q92610 ZNF592 Q92610.S78.p_ZNF592 Q92610_S78s _1_1_78_78 Q92610 Q92610|H0YM74 Zinc finger protein 592 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7926.7926.2 8.79 8.79 99 1 1 1 0 638.7867 1196.5996 S78s Hydrogen 76 (R) QEsFEAEK (D) QES(1.0)FEAEK K:TMT10-Lys-Only,s:Phosphorylated S ZNF592 140207.3 2 3 164.1 494.76 HUMAN 1 -14.708 33.0141 KNTSSETTMEEELGL-p Q15021;T976-p KNTSSETTMEEELGL 0.5493736861152 0.441829906813654 -0.0913333333333333 0.0866666666666667 4.80285990837182 4.72234066502917 -0.0913333333333334 0.0866666666666667 0.330913137380914 0.337105573930043 -1.06780416072211 1.05271795317904 Q15021 NCAPD2 Q15021.T976.p_NCAPD2 Q15021_T976t _1_1_976_976 Q15021 Q15021 Condensin complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.34010.34010.3 13.51 14.21 1.21 7 1 1 0 1097.8406 3211.5361 T976t TMT10 970 (K) NTSSETtMEEELGLVGATADDTEAELIR (G) NT(0.0)S(0.0)S(0.0)ET(0.0)T(0.99)MEEELGLVGAT(0.0)ADDT(0.0)EAELIR t:Phosphorylated T NCAPD2 158605.7 2 5 1192.1 168.06 HUMAN 1 -4.8029 4.7223 KNTSTVVSPSLLEKD-p Q6ZWJ1;S10-p KNTSTVVSPSLLEKD 0.10503732738293 0.963838353035951 -0.315333333333333 0.00466666666666667 20.6147589530883 0.228085412849718 -0.315333333333333 0.00466666666666667 0.00868008753134257 0.948836665739956 -4.01214408148895 0.0671924746441904 Q6ZWJ1 STXBP4 Q6ZWJ1.S10.p_STXBP4 Q6ZWJ1_S10s _1_1_10_10 Q6ZWJ1 Q6ZWJ1|E7EPP7|B5MCT9 Syntaxin-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22166.22166.3 10.09 10.09 1.277 5 1 1 0 638.3525 1833.0734 S10s TMT10 4 (K) NTSTVVsPSLLEK (D) NT(0.0)S(0.0)T(0.0)VVS(0.99)PS(0.0)LLEK K:TMT10,s:Phosphorylated S STXBP4 62174.2 4 1 3874.1 41.49 HUMAN 1 -20.6148 0.2281 KNVDSEGSLHRKYQE-p Q9ULM0;S84-p KNVDSEGSLHRKYQE 0.181080338359562 0.781817281298884 -0.356 -0.0373333333333333 14.6328383935619 1.48000141488671 -0.356 -0.0373333333333333 0.0344124949479963 0.711213281947326 -2.80986915365023 -0.390254579128941 Q9ULM0 PLEKHH1 Q9ULM0.S84.p_PLEKHH1 Q9ULM0_S84s _1_1_84_84 Q9ULM0 Q9ULM0 Pleckstrin homology domain-containing family H member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4535.4535.3 9.34 9.34 1.164 2 1 1 0 593.9767 1699.9492 S84s TMT10 78 (K) NVDSEGsLHRK (Y) NVDS(0.0)EGS(0.99)LHRK K:TMT10,s:Phosphorylated S PLEKHH1 152827.1 2 2 981.1 192.43 HUMAN 1 -14.6328 -1.48 KNVESFASMLRHSPL-p H0YC42;S196-p KNVESFASMLRHSPL 0.324195658268258 0.304834419061826 0.162666666666667 0.107666666666667 9.16261620876887 6.81404352062152 0.162666666666667 0.107666666666667 0.121265811988584 0.208255101057844 1.83651627281412 1.42803754395371 H0YC42 NotFound H0YC42.S196.p_NotFound H0YC42_S196s _1_1_196_196 H0YC42 H0YC42|Q9Y2Q9 Uncharacterized protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26054.26054.2 8.39 8.39 2.349 2 1 1 0 731.8521 1382.73 S196s TMT10 190 (K) NVESFAsMLR (H) NVES(0.0)FAS(0.99)MLR s:Phosphorylated S 31397.8 1 1 1260.99 161.11 HUMAN 1 9.1626 6.814 KNVRSDISDQEEDEE-p E7ETA6;S1760-p KNVRSDISDQEEDEE 0.809934241634077 0.0300950097120904 -0.0583333333333334 -0.408333333333333 1.75938253586314 20.5875926656186 -0.0583333333333334 -0.408333333333333 0.666901580120469 0.00873455398610506 -0.454830691230819 -4.00231791629826 E7ETA6 PCM1 E7ETA6.S1760.p_PCM1 E7ETA6_S1760s _1_1_1760_1760 E7ETA6 E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20868.20868.2 20.99 20.99 2.27 5 1 1 0 1553.1998 3025.4196 S1760s TMT10 1757 (R) SDIsDQEEDEESEGCPVSINLSK (A) S(0.0)DIS(0.99)DQEEDEES(0.0)EGCPVS(0.0)INLS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCM1 229381.8 4 51 13.1 1159.95 HUMAN 1 -1.7594 -20.5876 KNVVHQLSVTLEDLY-p P31689;S112-p KNVVHQLSVTLEDLY 0.0447859715508879 0.116212421700754 -0.515666666666667 -0.323666666666667 29.9012789079313 12.3305684519794 -0.515666666666667 -0.323666666666667 0.00102299169790447 0.058471354545013 -6.4021435994255 -2.38987790304328 P31689 DNAJA1 P31689.S112.p_DNAJA1 P31689_S112s _1_1_112_112 P31689 P31689|P31689-2 DnaJ homolog subfamily A member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32132.32132.4 17.13 17.13 2.861 4 1 1 0 699.6266 2715.5194 S112s TMT10 106 (K) NVVHQLsVTLEDLYNGATRK (L) NVVHQLS(0.99)VT(0.0)LEDLY(0.0)NGAT(0.0)RK K:TMT10,s:Phosphorylated S DNAJA1 45609.1 1 2 1959.1 105.16 HUMAN 1 -29.9013 -12.3306 KNYADQISRLEEREA-p O60271;S143-p KNYADQISRLEEREA 0.3231775162283 0.370438866992211 -0.167333333333333 -0.251666666666667 9.18217551273351 5.72093848417427 -0.167333333333333 -0.251666666666667 0.120720895605087 0.267858943525707 -1.83990302167941 -1.23440626819912 O60271 SPAG9 O60271.S143.p_SPAG9 O60271_S143s _1_1_143_143 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-3|O60271-5 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17892.17892.5 12.02 12.02 3.828 2 1 1 0 592.7232 2879.6194 S143s TMT10 137 (K) NYADQIsRLEEREAELKK (E) NY(0.0)ADQIS(0.99)RLEEREAELKK K:TMT10,s:Phosphorylated S SPAG9 147001.6 1 12 84.1 629.25 HUMAN 1 -9.1822 -5.7209 KNYDPKVTPDPERWL-p O76094;T571-p KNYDPKVTPDPERWL 0.879967450767715 0.700666011409071 0.03 0.0376666666666667 1.09148348115157 2.12385373905559 0.03 0.0376666666666667 0.777770831464591 0.613217621204909 0.296671250266361 0.535995257276146 O76094 SRP72 O76094.T571.p_SRP72 O76094_T571t _1_1_571_571 O76094 O76094|O76094-2 Signal recognition particle subunit SRP72 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9956.9956.3 12.55 12.55 5.568 2 1 1 0 656.9998 1889.0169 T571t TMT10 565 (K) NYDPKVtPDPER (W) NY(0.0)DPKVT(0.99)PDPER K:TMT10,t:Phosphorylated T SRP72 75175.4 2 5 1363.1 149.83 HUMAN 1 1.0915 2.1239 KNYLNFVSPLPDIVG-p Q9Y2X9;S484-p KNYLNFVSPLPDIVG 0.46227088763898 0.0115968606176892 0.148666666666667 -0.387333333333333 6.18068550940837 27.074415607183 0.148666666666667 -0.387333333333333 0.240952506869128 0.00196136508178821 1.31668804639758 -5.58135509318715 Q9Y2X9 ZNF281 Q9Y2X9.S484.p_ZNF281 Q9Y2X9_S484s _1_1_484_484 Q9Y2X9 Q9Y2X9|Q9Y2X9-2 Zinc finger protein 281 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.33574.33574.3 14.46 14.46 9.21 2 1 1 0 781.4242 2262.2898 S484s TMT10 478 (K) NYLNFVsPLPDIVGQK (S) NY(0.0)LNFVS(0.99)PLPDIVGQK K:TMT10,s:Phosphorylated S ZNF281 97654.7 1 9 1522.1 134.23 HUMAN 1 6.1807 -27.0744 KPAANRASGEWDSGT-p A0A0U1RQE4;S345-p KPAANRASGEWDSGT 0.368479250934454 0.0664052303665039 -0.199333333333333 -0.342 8.03945929129888 15.665546187722 -0.199333333333333 -0.342 0.157055833103905 0.0271297243542374 -1.64200507211723 -3.00216528352187 A0A0U1RQE4 NotFound A0A0U1RQE4.S345.p_NotFound A0A0U1RQE4_S345s _1_1_345_345 A0A0U1RQE4 A0A0U1RQE4|Q5HYK7 SH3 domain-containing protein 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14119.14119.5 15.28 12.76 2.306 8 1 1 0 915.2942 4492.4718 S345s TMT10 321 (R) SLPPKPTVSSGKPSVAPKPAANRAsGEWDSGTENR (L) S(0.0)LPPKPT(0.0)VS(0.0)S(0.0)GKPS(0.0)VAPKPAANRAS(0.99)GEWDS(0.0)GT(0.0)ENR K:TMT10,s:Phosphorylated S SH3D19 115424.2 1 4 1907.1 107.96 HUMAN 1 -8.0395 -15.6655 KPAGMQNSLPRNFFL-p Q96F81;S1350-p KPAGMQNSLPRNFFL 0.326802591871946 0.768412363237064 -0.155666666666667 -0.0486666666666667 9.08849256116226 1.58181568543591 -0.155666666666667 -0.0486666666666666 0.123353291897072 0.694733804624629 -1.82368259641331 -0.414018122057196 Q96F81 DISP1 Q96F81.S1350.p_DISP1 Q96F81_S1350s _1_1_1350_1350 Q96F81 Q96F81 Protein dispatched homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11503.11503.3 9.24 9.24 99 1 1 1 0 612.6713 1756.0304 S1350s TMT10 1342 (R) VKPAGMQNsLPR (N) VKPAGMQNS(1.0)LPR K:TMT10,s:Phosphorylated S DISP1 174639.5 1 1 5393.1 19.75 HUMAN 1 -9.0885 -1.5818 KPAPDETSFSEALLK-p Q12905;S52-p KPAPDETSFSEALLK 0.189392859052769 0.0263581786161247 -0.264333333333333 0.314 14.1473959088401 21.4471545693295 -0.264333333333333 0.314 0.0384822457870619 0.00716612770106116 -2.72002096578271 4.19234931307825 Q12905 ILF2 Q12905.S52.p_ILF2 Q12905_S52s _1_1_52_52 Q12905 Q12905|B4DY09|A0A0A0MRL0 Interleukin enhancer-binding factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23665.23665.3 12.77 12.77 1.139 3 1 1 0 833.7958 2419.4051 S52s TMT10 44 (R) VKPAPDETsFSEALLK (R) VKPAPDET(0.0)S(0.99)FS(0.0)EALLK K:TMT10,s:Phosphorylated S ILF2 43289.6 3 1 2814.1 69.64 HUMAN 1 -14.1474 21.4472 KPAPLLESPFKDRDH-p O00203;S609-p KPAPLLESPFKDRDH 0.222079109388678 0.0131824458012311 -0.648333333333333 0.532 12.5758102422318 26.1758323736234 -0.648333333333333 0.532 0.0552610300492799 0.00241221915968259 -2.43490371801692 5.34079868638948 O00203 AP3B1 O00203.S609.p_AP3B1 O00203_S609s _1_1_609_609 O00203 O00203|O00203-3 AP-3 complex subunit beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26432.26432.4 22.87 22.87 99 1 1 1 0 731.6956 2843.7933 S609s TMT10 596 (K) KIFLAQKPAPLLEsPFK (D) KIFLAQKPAPLLES(1.0)PFK K:TMT10,s:Phosphorylated S AP3B1 121888.5 6 4 445.1 310.27 HUMAN 1 -12.5758 26.1758 KPAPLPLSPGKNSFG-p Q02086-2;S71-p KPAPLPLSPGKNSFG 0.165786190720078 0.00272422972588299 -0.511666666666667 -0.748 15.6092223272267 38.9451176910277 -0.511666666666667 -0.748 0.0274838625095203 0.000127493554953738 -2.99351141806948 -9.66686547578938 Q02086 SP2 Q02086.2.S71.p_SP2 Q02086-2_S71s _1_1_71_71 Q02086-2 Q02086|Q02086-2|Q9BRW5 Isoform 2 of Transcription factor Sp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28122.28122.5 20.88 20.88 1.672 4 1 1 0 763.6712 3734.3685 S71s TMT10 59 (R) KLVPIKPAPLPLsPGKNSFGILSSK (G) KLVPIKPAPLPLS(0.99)PGKNS(0.0)FGILS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SP2 64779.7 9 5 950.1 196.36 HUMAN 1 -15.6092 -38.9451 KPAVTTKSPAVKPAA-p Q14978-3;S398-p KPAVTTKSPAVKPAA 0.134264480831341 0.0119359897334166 -0.558333333333333 -0.663666666666667 17.9155918228893 26.8709459969298 -0.558333333333333 -0.663666666666667 0.0161599799540833 0.00205544282276366 -3.44520283341083 -5.52619784427848 Q14978 NOLC1 Q14978.3.S398.p_NOLC1 Q14978-3_S398s _1_1_398_398 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10328.10328.4 14.78 14.78 99 1 1 1 0 696.9124 2704.6644 S398s TMT10 398 (K) sPAVKPAAAPKQPVGGGQK (L) S(1.0)PAVKPAAAPKQPVGGGQK K:TMT10,s:Phosphorylated S NOLC1 73744 9 8 72.1 655.55 HUMAN 1 -17.9156 -26.8709 KPAYSPASWSSRSAV-p Q9Y446-2;S133-p KPAYSPASWSSRSAV 0.694929373039766 0.00502181480803641 0.112333333333333 0.534333333333333 2.96590174777406 33.5199856294292 0.112333333333333 0.534333333333333 0.505137749724291 0.000444632738732492 0.713478009850257 7.56493370413197 Q9Y446 PKP3 Q9Y446.2.S133.p_PKP3 Q9Y446-2_S133s _1_1_133_133 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14294.14294.2 12.15 12.15 2.431 5 1 1 0 759.353 1437.7324 S133s TMT10 127 (K) PAYSPAsWSSR (S) PAY(0.0)S(0.0)PAS(0.99)WS(0.0)S(0.0)R s:Phosphorylated S PKP3 89109.7 1 4 454.1 307.47 HUMAN 1 2.9659 33.52 KPCGVRLSGEARKQV-p A0A087X1Z3;S10-p KPCGVRLSGEARKQV 0.20191208591335 0.0769088264843425 -0.426333333333333 0.256333333333333 13.4963434098032 14.7806037464069 -0.426333333333333 0.256333333333333 0.044705984068947 0.03326133109265 -2.60090183721697 2.83558637866243 A0A087X1Z3 NotFound A0A087X1Z3.S10.p_NotFound A0A087X1Z3_S10s _1_1_10_10 A0A087X1Z3 A0A087X1Z3|Q9UL46|H0YM70|H0YLD2|H0YLG1 Proteasome activator complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9136.9136.3 9.9 3.41 99 1 1 1 0 584.6324 1671.9162 S10s Acetyl 2 (M) AKPCGVRLsGEAR (K) AKPCGVRLS(1.0)GEAR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PSME2 29297.3 5 1 3392.1 52.19 HUMAN 1 -13.4963 14.7806 KPCLSPKSDCENSET-p Q8NF99;S185-p KPCLSPKSDCENSET 0.234279051945656 0.896278131388149 0.689 -0.031 12.0838259764156 0.667539261010631 0.689 -0.031 0.0618895610323728 0.857523585692852 2.34721183019075 -0.188252967469741 Q8NF99 ZNF397 Q8NF99.S185.p_ZNF397 Q8NF99_S182sS185s_2_2_182_185 Q8NF99 Q8NF99|Q8NF99-2 Zinc finger protein 397 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18154.18154.4 7.16 7.16 1.291 7 2 2 0 1101.5447 4243.2235 S182s S185s TMT10 176 (K) SWKPCLsPKsDCENSETATKEGISEEK (S) S(0.0)WKPCLS(0.99)PKS(0.99)DCENS(0.0)ET(0.0)AT(0.0)KEGIS(0.0)EEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF397 62678.3 5 106 240.15 415.72 HUMAN 1 12.0838 -0.6675 KPDEDLPSPGARGQQ-p P10071;S445-p KPDEDLPSPGARGQQ 0.621777378165252 0.39655595390914 -0.081 0.0926666666666667 3.83605401311191 5.34090065966755 -0.081 0.0926666666666667 0.413422966282563 0.292354601668834 -0.885658560626227 1.16592971672494 P10071 GLI3 P10071.S445.p_GLI3 P10071_S445s _1_1_445_445 P10071 P10071 Transcriptional activator GLI3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13318.13318.3 11.97 11.97 99 1 1 1 0 645.0113 1853.0533 S445s TMT10 437 (K) IKPDEDLPsPGAR (G) IKPDEDLPS(1.0)PGAR K:TMT10,s:Phosphorylated S GLI3 171514.7 3 1 1965.1 105.02 HUMAN 1 -3.8361 5.3409 KPDGEDTSGEEDADD-p Q96L91;S1011-p KPDGEDTSGEEDADD 0.836155682095094 0.488069413769716 -0.0456666666666667 -0.0706666666666667 1.5027693700071 4.16229112942118 -0.0456666666666667 -0.0706666666666666 0.707494491784511 0.383504873335803 -0.395636520797624 -0.947861966153062 Q96L91 EP400 Q96L91.S1011.p_EP400 Q96L91_T1010tS1011s_2_2_1010_1011 Q96L91 Q96L91|Q96L91-2|Q96L91-5|Q96L91-3|Q96L91-4 E1A-binding protein p400 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21743.21743.5 18.32 18.32 5.326 6 2 2 0 1049.0826 5081.4426 T1010t S1011s TMT10 989 (K) LYEGAFLPSSQWPRPKPDGEDtsGEEDADDCPGDRESRK (D) LY(0.0)EGAFLPS(0.0)S(0.0)QWPRPKPDGEDT(0.99)S(0.99)GEEDADDCPGDRES(0.0)RK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S EP400 344909.2 5 34 91.1 620.97 HUMAN 1 -1.5028 -4.1623 KPDPVLKSPSPVLRL-p A0A0U1RQK7;S419-p KPDPVLKSPSPVLRL 0.0651075040180817 0.110374083698285 -0.449 -0.238333333333333 25.6336052884702 12.6371066653642 -0.449 -0.238333333333333 0.00273299898972959 0.0544865529497299 -5.20606028261414 -2.44457975128198 A0A0U1RQK7 NotFound A0A0U1RQK7.S419.p_NotFound A0A0U1RQK7_S419sS421s_2_2_419_421 A0A0U1RQK7 A0A0U1RQK7|A0A0A0MSA7|O43432-3|O43432-2 Eukaryotic translation initiation factor 4 gamma 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16452.16452.5 9.82 4.04 99 2 2 2 0 644.9661 3060.8591 S419s S421s TMT10 407 (K) QEEKPKPDPVLKsPsPVLR (L) QEEKPKPDPVLKS(1.0)PS(1.0)PVLR K:TMT10,s:Phosphorylated S EIF4G3 196410.6 2 9 857.1 210.84 HUMAN 1 -25.6336 -12.6371 KPDRKGQSPKILRLK-p Q13480-2;S531-p KPDRKGQSPKILRLK 0.992231114793948 0.626284160520701 0.00466666666666668 -0.346333333333333 0.0721708451420184 2.76489625835606 0.00466666666666669 -0.346333333333333 0.983519365242454 0.529066635083012 0.0216286104834729 -0.672151519053397 Q13480 GAB1 Q13480.2.S531.p_GAB1 Q13480-2_S531s _1_1_531_531 Q13480-2 Q13480-2 Isoform 2 of GRB2-associated-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6576.6576.5 8.68 3.91 99 1 1 1 0 473.6848 2284.4271 S531s TMT10 522 (R) NLKPDRKGQsPK (I) NLKPDRKGQS(1.0)PK K:TMT10,s:Phosphorylated S GAB1 80631.3 2 15 368.1 340.82 HUMAN 1 0.0722 -2.7649 KPEAPKGSPQINRKS-p O94876;S134-p KPEAPKGSPQINRKS 0.728963070362327 0.806189485694931 0.048 0.0503333333333334 2.60775937758056 1.30968764542944 0.048 0.0503333333333334 0.548559906258117 0.739658471082045 0.639552197741323 0.3498165072647 O94876 TMCC1 O94876.S134.p_TMCC1 O94876_S134s _1_1_134_134 O94876 O94876|E9PC87 Transmembrane and coiled-coil domains protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5215.5215.3 10.43 5.6 99 1 1 1 0 479.9367 1357.8316 S134s TMT10 133 (K) GsPQINRK (S) GS(1.0)PQINRK K:TMT10,s:Phosphorylated S TMCC1 72481.1 4 1 1921.1 106.93 HUMAN 1 2.6078 1.3097 KPEENPASKFSSASK-p P23588;S585-p KPEENPASKFSSASK 0.171396449036957 0.0773785405410135 0.225 -0.222666666666667 15.2527443168389 14.7466443379625 0.225 -0.222666666666667 0.0298349674466855 0.033522435683214 2.92598937030919 -2.82925971018045 P23588 EIF4B P23588.S585.p_EIF4B P23588_S585s _1_1_585_585 P23588 E7EX17|P23588|P23588-2 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7185.7185.3 8.78 3.8 99 1 1 1 0 589.6609 1686.9993 S585s TMT10 578 (K) KPEENPAsK (F) KPEENPAS(1.0)K K:TMT10,s:Phosphorylated S EIF4B 69207 1 22 146.1 516.36 HUMAN 1 15.2527 -14.7466 KPEETTRSPDEEDYD-p P46821;S1881-p KPEETTRSPDEEDYD 0.619741134857635 0.158769993208171 0.092 -0.316333333333333 3.8624648778083 10.5140646465136 0.092 -0.316333333333333 0.410916435550994 0.0888369286563674 0.890746661810131 -2.07029383225177 P46821 MAP1B P46821.S1881.p_MAP1B P46821_S1881s _1_1_1881_1881 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17223.17223.5 20.33 20.33 1.197 12 1 1 0 1036.8873 5100.4204 S1881s TMT10 1859 (K) DSGGKTPGDFSYAYQKPEETTRsPDEEDYDYESYEK (T) DS(0.0)GGKT(0.0)PGDFS(0.0)Y(0.0)AY(0.0)QKPEET(0.0)T(0.0)RS(0.99)PDEEDY(0.0)DY(0.0)ES(0.0)Y(0.0)EK K:TMT10,s:Phosphorylated S MAP1B 271827.6 1 19 210.1 442.48 HUMAN 1 3.8625 -10.5141 KPEGRQMTPVKGEPL-p Q9P265;T322-p KPEGRQMTPVKGEPL 0.338781881422564 0.425986367074874 0.131666666666667 0.077 8.74439264512242 4.93229741580044 0.131666666666667 0.077 0.133524430859144 0.321196096327877 1.76411694965853 1.09141845555954 Q9P265 DIP2B Q9P265.T322.p_DIP2B Q9P265_T322t_1_1_322_322 Q9P265 Q9P265 Disco-interacting protein 2 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32167.32167.4 18.83 12.85 18.828 2 1 1 0 858.4526 3349.8165 T322t N334n TMT10 320 (R) QMtPVKGEPLGVICnWPPALESALQR (W) QMT(0.99)PVKGEPLGVICN(1.0)WPPALES(0.0)ALQR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,n:Deamidated DIP2B 173713.6 3 10 1010.1 188.94 HUMAN 1 8.7444 4.9323 KPEGSICSEDDCTKD-p Q8NEZ4-3;S3800-p KPEGSICSEDDCTKD 0.547015446022891 0.0674297840329181 -0.0976666666666667 -0.588333333333333 4.83584192039383 15.5798891623808 -0.0976666666666667 -0.588333333333333 0.328409572870268 0.0276701226227421 -1.07388762022324 -2.98589242276358 Q8NEZ4 KMT2C Q8NEZ4.3.S3800.p_KMT2C Q8NEZ4-3_S3800s _1_1_3800_3800 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15342.15342.4 13.75 13.75 3.11 6 1 1 0 781.3801 3042.5327 S3800s TMT10 3786 (K) SSSLLNQKPEGSICsEDDCTK (D) S(0.0)S(0.0)S(0.0)LLNQKPEGS(0.0)ICS(0.99)EDDCT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S KMT2C 554869.1 3 20 88.1 626.31 HUMAN 1 -4.8358 -15.5799 KPEPTYVSPPCPRLS-p Q7Z2Z1;S1623-p KPEPTYVSPPCPRLS 0.504140810986548 0.00963323639650954 0.139666666666667 -0.460666666666667 5.49128473425071 28.4305142739862 0.139666666666667 -0.460666666666667 0.282404443970577 0.00143531945855636 1.19337549020048 -5.95965501249359 Q7Z2Z1 TICRR Q7Z2Z1.S1623.p_TICRR Q7Z2Z1_S1623s _1_1_1623_1623 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15051.15051.3 10.33 10.33 2.528 5 1 1 0 785.0736 2273.2364 S1623s TMT10 1613 (R) SLSKPEPTYVsPPCPR (L) S(0.0)LS(0.0)KPEPT(0.0)Y(0.0)VS(0.99)PPCPR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TICRR 212850 1 21 238.1 417.32 HUMAN 1 5.4913 -28.4305 KPFITVVSPKSPHLH-p Q86YA3;S877-p KPFITVVSPKSPHLH 0.33341548273698 0.00227464949884667 -0.2 -0.817333333333333 8.90599558943035 40.8230840070307 -0.2 -0.817333333333334 0.128647230453265 8.27354435068899e-05 -1.79209024699217 -10.5078430421174 Q86YA3 ZGRF1 Q86YA3.S877.p_ZGRF1 Q86YA3_S877sS880s_2_2_877_880 Q86YA3 Q86YA3|Q86YA3-4|G3XAL8|Q86YA3-5|Q86YA3-6 Protein ZGRF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18258.18258.5 10.82 10.82 2.837 3 2 2 0 579.1365 2731.7157 S877s S880s TMT10 870 (R) KPFITVVsPKsPHLHK (D) KPFIT(0.0)VVS(0.99)PKS(0.99)PHLHK K:TMT10,s:Phosphorylated S ZGRF1 239050.7 2 2 4729.1 27.38 HUMAN 1 -8.906 -40.8231 KPFPRSNSTSSMSSG-p P42684-6;S762-p KPFPRSNSTSSMSSG 0.190209416769307 0.746431399721503 0.229333333333333 -0.033 14.1003437924163 1.75327537362016 0.229333333333333 -0.033 0.0389014348960196 0.667840054210021 2.711360437816 -0.453391955314184 P42684 ABL2 P42684.6.S762.p_ABL2 P42684-6_S762s _1_1_762_762 P42684-6 P42684|P42684-3|P42684-6 Isoform 6 of Abelson tyrosine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9396.9396.2 15.68 15.68 1.126 7 1 1 0 996.4323 1911.8916 S762s TMT10 760 (R) SNsTSSMSSGLPEQDR (M) S(0.0)NS(0.99)T(0.0)S(0.0)S(0.0)MS(0.0)S(0.0)GLPEQDR s:Phosphorylated S ABL2 127186.4 2 8 615.1 261.3 HUMAN 1 14.1003 -1.7533 KPFRGSQSPKRYKLR-p Q9Y2W1;S408-p KPFRGSQSPKRYKLR 0.632464430366418 0.117169286111329 0.07 0.255333333333333 3.70683053739577 12.2781056161284 0.07 0.255333333333333 0.42590912640509 0.0591819728466935 0.860658073926913 2.38054179277848 Q9Y2W1 THRAP3 Q9Y2W1.S408.p_THRAP3 Q9Y2W1_S408s _1_1_408_408 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7948.8338.4 12.19 8.41 2.129 4 1 1 0 583.5638 2251.265 S408s TMT10 397 (K) TDSEKPFRGSQsPK (R) T(0.0)DS(0.0)EKPFRGS(0.0)QS(0.99)PK K:TMT10,s:Phosphorylated S THRAP3 108720.9 32 69 10.2 1293.04 HUMAN 1 3.7068 12.2781 KPFSVSSTPTMSRSS-p P82094-2;T932-p KPFSVSSTPTMSRSS 0.153364244244344 0.0527171545383055 0.238333333333333 0.259333333333333 16.3726282669961 17.0506452361854 0.238333333333333 0.259333333333333 0.0230535161184824 0.0197212971282344 3.14006977044065 3.27011540008824 P82094 TMF1 P82094.2.T932.p_TMF1 P82094-2_S931sT932t_2_2_931_932 P82094-2 P82094|P82094-2 Isoform 2 of TATA element modulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12302.12760.2 11.29 11.29 1.107 6 2 2 0 907.4112 1653.8832 S931s T932t Hydrogen 925 (R) KPFSVSstPTMSR (S) KPFS(0.0)VS(0.0)S(0.99)T(0.99)PT(0.0)MS(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T TMF1 123666.4 7 25 393.1 331.84 HUMAN 1 16.3726 17.0506 KPFVALGSGEESPLE-p Q9NX74;S484-p KPFVALGSGEESPLE 0.772011321108513 0.113133624813295 -0.0486666666666667 0.250333333333333 2.14961574575017 12.4825237538617 -0.0486666666666667 0.250333333333333 0.609590830116309 0.0564608776378975 -0.541686369813032 2.41696158533374 Q9NX74 DUS2 Q9NX74.S484.p_DUS2 Q9NX74_S484s _1_1_484_484 Q9NX74 Q9NX74|E7EUN9 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.32357.32357.3 15.97 15.97 1.121 2 1 1 0 781.0689 2261.2218 S484s TMT10 477 (K) KPFVALGsGEESPLEGW (-) KPFVALGS(0.99)GEES(0.0)PLEGW K:TMT10,s:Phosphorylated S DUS2 55848.1 2 2 4148.1 36.68 HUMAN 1 -2.1496 12.4825 KPGDGEVSPSTEDAP-p O60318;S527-p KPGDGEVSPSTEDAP 0.887259194808546 0.0178856638444567 0.024 0.367666666666667 1.01406482002954 24.0658486706399 0.024 0.367666666666667 0.791759928425477 0.00392116513931491 0.277402727956086 4.80530201213763 O60318 MCM3AP O60318.S527.p_MCM3AP O60318_S527s _1_1_527_527 O60318 O60318 Germinal-center associated nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16767.16767.3 20.5 20.5 1.163 4 1 1 0 1049.8704 3067.6303 S527s TMT10 520 (K) KPGDGEVsPSTEDAPFQHSPLGK (A) KPGDGEVS(0.99)PS(0.0)T(0.0)EDAPFQHS(0.0)PLGK K:TMT10,s:Phosphorylated S MCM3AP 220797 9 5 653.1 254.06 HUMAN 1 1.0141 24.0658 KPGEGLDSPMGAKSA-p Q9UPX8-3;S1648-p KPGEGLDSPMGAKSA 0.186966364173873 0.0237387828429253 0.377 -0.478 14.3147896134208 22.1555555579819 0.377 -0.478 0.0370272142170175 0.00608757667310773 2.7508997940115 -4.35294669361888 Q9UPX8 SHANK2 Q9UPX8.3.S1648.p_SHANK2 Q9UPX8-3_S1648s _1_1_1648_1648 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6|Q9UPX8-4 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17404.17404.3 13.43 13.43 99 1 1 1 0 746.7435 2158.2509 S1648s TMT10 1639 (K) LAKPGEGLDsPMGAK (S) LAKPGEGLDS(1.0)PMGAK K:TMT10,s:Phosphorylated S SHANK2 202341.2 1 27 86.1 628.23 HUMAN 1 14.3148 -22.1556 KPGILGDSPLGALQP-p Q8IY67-2;S399-p KPGILGDSPLGALQP 0.651183474642633 0.803011694038898 0.0643333333333333 0.029 3.49127471887949 1.33354323440501 0.0643333333333333 0.029 0.447581912948136 0.735606700619427 0.818545251297427 0.355534570946754 Q8IY67 RAVER1 Q8IY67.2.S399.p_RAVER1 Q8IY67-2_S399s _1_1_399_399 Q8IY67-2 E9PAU2|Q8IY67-2|A0A087WZ13 Isoform 2 of Ribonucleoprotein PTB-binding 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31392.31392.5 20.82 20.82 99 1 1 1 0 912.1072 4476.5495 S399s TMT10 392 (K) KPGILGDsPLGALQPGAQPANPLLGELPAGGGLPPELPPRR (G) KPGILGDS(1.0)PLGALQPGAQPANPLLGELPAGGGLPPELPPRR K:TMT10,s:Phosphorylated S RAVER1 78371.6 2 3 785.1 225.39 HUMAN 1 3.4913 1.3335 KPGPNIESGNEDDDA-p O60841;S214-p KPGPNIESGNEDDDA 0.859015979439073 0.232649877451073 0.026 -0.131333333333333 1.28746217741259 8.34136536691385 0.026 -0.131333333333333 0.74345345191217 0.146508716367291 0.344508213030562 -1.69377148867451 O60841 EIF5B O60841.S214.p_EIF5B O60841_S214s _1_1_214_214 O60841 O60841|A0A087WUT6 Eukaryotic translation initiation factor 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13714.14411.3 23.15 23.15 8.94 2 1 1 0 934.4592 2721.3935 S214s TMT10 206 (K) NKPGPNIEsGNEDDDASFK (I) NKPGPNIES(0.99)GNEDDDAS(0.0)FK K:TMT10,s:Phosphorylated S EIF5B 139280.8 28 9 113.1 571.22 HUMAN 1 1.2875 -8.3414 KPGQFIRSVDPDSPA-p O14745;S181-p KPGQFIRSVDPDSPA 0.772011321108513 0.197679311494721 0.0503333333333333 0.165666666666667 2.14974014733083 9.2635167105599 0.0503333333333333 0.165666666666667 0.609573368928135 0.118480895757084 0.541713509659815 1.85330078676897 O14745 SLC9A3R1 O14745.S181.p_SLC9A3R1 O14745_S181s _1_1_181_181 O14745 O14745|O14745-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15519.15519.4 14.13 9.73 2.785 4 1 1 0 713.8741 2772.5045 S181s TMT10 173 (K) SKPGQFIRsVDPDSPAEASGLR (A) S(0.0)KPGQFIRS(0.99)VDPDS(0.0)PAEAS(0.0)GLR K:TMT10,s:Phosphorylated S SLC9A3R1 39153 1 5 534.1 279.04 HUMAN 1 2.1497 9.2635 KPGRKGISLNPEQWS-p P53999;S104-p KPGRKGISLNPEQWS 0.21687479868863 0.553139961854764 -0.197 -0.0713333333333333 12.7876331100754 3.46354222313296 -0.197 -0.0713333333333333 0.0526304022117215 0.450449156168547 -2.47286904301859 -0.812963408215026 P53999 SUB1 P53999.S104.p_SUB1 P53999_S104s _1_1_104_104 P53999 P53999 Activated RNA polymerase II transcriptional coactivator p15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29130.29130.3 14.42 12.91 6.103 2 1 1 0 680.031 1958.1111 S104s TMT10 102 (K) GIsLNPEQWSQLK (E) GIS(0.99)LNPEQWS(0.0)QLK K:TMT10,s:Phosphorylated S SUB1 14395.1 1 4 2095.1 97.85 HUMAN 1 -12.7876 -3.4635 KPGRKPPTPGPEKAE-p Q6ZRI6;T970-p KPGRKPPTPGPEKAE 0.142230539633047 0.416338183420862 -0.329 -0.0823333333333333 17.3045267651979 5.06231616824421 -0.329 -0.0823333333333333 0.0186014724561695 0.3117226669333 -3.32285670518407 -1.11523791724395 Q6ZRI6 C15orf39 Q6ZRI6.T970.p_C15orf39 Q6ZRI6_T970t _1_1_970_970 Q6ZRI6 Q6ZRI6|Q6ZRI6-3 Uncharacterized protein C15orf39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8481.8481.3 11.34 6.04 99 1 1 1 0 573.3337 1638.0194 T970t TMT10 967 (R) KPPtPGPEK (A) KPPT(1.0)PGPEK K:TMT10,t:Phosphorylated T C15orf39 112154.2 2 5 2185.1 94.11 HUMAN 1 -17.3045 -5.0623 KPGTPGNSPSSQRLP-p P78524;S368-p KPGTPGNSPSSQRLP 0.798363861160931 0.0386051786874116 0.0563333333333333 -0.275 1.88420825548767 18.985570909669 0.0563333333333334 -0.275 0.648006219865393 0.0126311504781901 0.48300364328519 -3.66133919311876 P78524 ST5 P78524.S368.p_ST5 P78524_S368s _1_1_368_368 P78524 P78524 Suppression of tumorigenicity 5 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8634.8634.4 10.59 10.59 2 8 1 1 0 756.6488 2943.6103 S368s TMT10 355 (R) EGSGSTKPGTPGNsPSSQRLPSK (S) EGS(0.0)GS(0.0)T(0.0)KPGT(0.0)PGNS(0.99)PS(0.0)S(0.0)QRLPS(0.0)K K:TMT10,s:Phosphorylated S ST5 127680.5 1 2 2234.1 92.43 HUMAN 1 1.8842 -18.9856 KPGTWRGSLDESSLG-p Q9BUZ4;S426-p KPGTWRGSLDESSLG 0.230644318620517 0.494093745492666 -0.184666666666667 -0.09 12.2440602109191 4.09385885909783 -0.184666666666667 -0.09 0.0596477380254041 0.389595663400455 -2.3757003479716 -0.934867727635361 Q9BUZ4 TRAF4 Q9BUZ4.S426.p_TRAF4 Q9BUZ4_S426s _1_1_426_426 Q9BUZ4 Q9BUZ4|Q2KJU6 TNF receptor-associated factor 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23356.23356.2 19.14 14.54 3.124 4 1 1 0 997.998 1915.0213 S426s TMT10 425 (R) GsLDESSLGFGYPK (F) GS(0.99)LDES(0.0)S(0.0)LGFGY(0.0)PK K:TMT10,s:Phosphorylated S TRAF4 55253.4 13 1 3448.1 50.76 HUMAN 1 -12.2441 -4.0939 KPHSTRRSQPKAPPV-p Q9UIG0;S1315-p KPHSTRRSQPKAPPV 0.844605466455093 0.00162286863808758 0.0523333333333333 -0.864333333333333 1.41698866708391 44.5715717523826 0.0523333333333334 -0.864333333333334 0.721607657700841 3.49013981192409e-05 0.375435612857244 -12.3918908017044 Q9UIG0 BAZ1B Q9UIG0.S1315.p_BAZ1B Q9UIG0_S1315s _1_1_1315_1315 Q9UIG0 Q9UIG0|Q9UIG0-2 Tyrosine-protein kinase BAZ1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25103.25103.4 22.37 22.37 22.37 2 1 1 0 762.4128 2966.6653 S1315s TMT10 1315 (R) sQPKAPPVDDAEVDELVLQTK (R) S(0.99)QPKAPPVDDAEVDELVLQT(0.0)K K:TMT10,s:Phosphorylated S BAZ1B 172497.3 3 10 370.1 339.44 HUMAN 1 1.417 -44.5716 KPIPKKGTVEGFEPA-p P37108;T45-p KPIPKKGTVEGFEPA 0.582031990513545 0.0291346589922779 0.122666666666667 0.278666666666667 4.32658659376509 20.7867420032963 0.122666666666667 0.278666666666667 0.369267716351532 0.00834306831436448 0.979064480230986 4.04588765586565 P37108 SRP14 P37108.T45.p_SRP14 P37108_T45t _1_1_45_45 P37108 P37108|H0YLA2 Signal recognition particle 14 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13266.13266.3 11.33 11.33 99 1 1 1 0 720.3847 2079.1689 T45t TMT10 43 (K) KGtVEGFEPADNK (C) KGT(1.0)VEGFEPADNK K:TMT10,t:Phosphorylated T SRP14 14683.8 1 1 5733.1 16.72 HUMAN 1 4.3266 20.7867 KPIQSENSDSDSNMV-p Q6UB98-2;S15-p KPIQSENSDSDSNMV 0.175114346915946 0.268353223732572 0.284666666666667 -0.157333333333333 15.0718799962961 7.52315573601374 0.284666666666667 -0.157333333333333 0.0311036961283888 0.176882320226441 2.89194322953185 -1.55185185612944 Q6UB98 ANKRD12 Q6UB98.2.S15.p_ANKRD12 Q6UB98-2_S15sS17s_2_2_15_17 Q6UB98-2 Q6UB98|Q6UB98-2|J3KSU9 Isoform 2 of Ankyrin repeat domain-containing protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17569.17569.5 8.99 8.99 1.244 7 2 2 0 724.9479 3460.7622 S15s S17s TMT10 4 (K) SGFTKPIQSENsDsDSNMVEKPYGR (K) S(0.0)GFT(0.0)KPIQS(0.0)ENS(0.99)DS(0.99)DS(0.0)NMVEKPY(0.0)GR K:TMT10,s:Phosphorylated S ANKRD12 234548.2 1 16 480.1 298.87 HUMAN 1 15.0719 -7.5232 KPIVRSVSVVTGSEQ-p Q9UPN4-2;S47-p KPIVRSVSVVTGSEQ 0.132826527475612 0.077598631942524 0.370666666666667 -0.202 18.0910799296558 14.7255568726296 0.370666666666667 -0.202 0.01552001036749 0.033685601972303 3.48072159170158 -2.82533344953247 Q9UPN4 CEP131 Q9UPN4.2.S47.p_CEP131 Q9UPN4-2_S47s _1_1_47_47 Q9UPN4-2 Q9UPN4|Q9UPN4-2|I3L2J8|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13287.13287.3 12.51 11.68 2.215 4 1 1 0 553.6317 1578.9103 S47s TMT10 45 (R) SVsVVTGSEQK (R) S(0.0)VS(0.99)VVT(0.0)GS(0.0)EQK K:TMT10,s:Phosphorylated S CEP131 122301.7 2 3 359.1 345.98 HUMAN 1 18.0911 -14.7256 KPKAHQFSIKSFSSP-p Q9Y5S2;S1029-p KPKAHQFSIKSFSSP 0.546344237168964 0.328632951514276 0.0946666666666667 0.150666666666667 4.84592590694997 6.40061637882779 0.0946666666666667 0.150666666666667 0.327647915493061 0.229054254107998 1.07574610657347 1.3552871181416 Q9Y5S2 CDC42BPB Q9Y5S2.S1029.p_CDC42BPB Q9Y5S2_S1029s _1_1_1029_1029 Q9Y5S2 Q9Y5S2 Serine/threonine-protein kinase MRCK beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11086.11086.3 9.2 9.2 99 1 1 1 0 456.9195 1288.7778 S1029s TMT10 1025 (K) AHQFsIK (S) AHQFS(1.0)IK K:TMT10,s:Phosphorylated S CDC42BPB 196308.8 1 5 1601.1 128.56 HUMAN 1 4.8459 6.4006 KPKAQPLSLEELLAK-p Q9BUQ8;S143-p KPKAQPLSLEELLAK 0.166624001871184 0.236791200830264 0.223333333333333 0.130666666666667 15.5610562992206 8.24069637870555 0.223333333333333 0.130666666666667 0.0277903726287452 0.149944438463244 2.98435505751726 1.67634293905611 Q9BUQ8 DDX23 Q9BUQ8.S143.p_DDX23 Q9BUQ8_S143s _1_1_143_143 Q9BUQ8 Q9BUQ8 Probable ATP-dependent RNA helicase DDX23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.32092.32092.3 12.66 12.66 99 1 1 1 0 617.3542 1770.0777 S143s TMT10 139 (K) AQPLsLEELLAK (K) AQPLS(1.0)LEELLAK K:TMT10,s:Phosphorylated S DDX23 95923.1 3 80 121.5 549.41 HUMAN 1 15.5611 8.2407 KPKEGVKTENDHINL-p A8MU27;T12-p KPKEGVKTENDHINL 0.152872172873321 0.0142064592789402 0.638 -0.645666666666667 16.4048054305807 25.6220010811729 0.638 -0.645666666666667 0.0228833422954548 0.00274031123883174 3.14630817594906 -5.19635817933027 A8MU27 NotFound A8MU27.T12.p_NotFound A8MU27_T12t _1_1_12_12 A8MU27 A8MU27|P55854-2|A8MUA9 Small ubiquitin-related modifier 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11885.11885.5 13.29 7.26 2.417 2 1 1 0 647.5583 3153.7925 T12t Acetyl 2 (M) SEEKPKEGVKtENDHINLK (V) S(0.0)EEKPKEGVKT(0.99)ENDHINLK K:TMT10,t:Phosphorylated T SUMO3 17127.4 1 2 3254.1 55.79 HUMAN 1 16.4048 -25.622 KPKKAPKSPAKAKAV-p P10412;S187-p KPKKAPKSPAKAKAV 0.258933903729589 0.000952253650599092 0.18 -1.45633333333333 11.1518200351392 53.2806975450511 0.18 -1.45633333333333 0.076703997197526 4.69818642302429e-06 2.18272851662972 -18.0797324830976 P10412 HIST1H1E P10412.S187.p_HIST1H1E P10412_S187s _1_1_187_187 P10412 P10412 Histone H1.4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6352.6352.3 9.82 2.63 99 1 1 1 0 608.3822 1743.1662 S187s TMT10 183 (K) KAPKsPAK (A) KAPKS(1.0)PAK K:TMT10,s:Phosphorylated S HIST1H1E 21864.9 6 4 738.3 234.77 HUMAN 1 11.1518 -53.2807 KPKKPLTSSSAAPQR-p Q15691;S155-p KPKKPLTSSSAAPQR 0.106191421457099 0.00344232616743565 -0.430666666666667 -0.627666666666667 20.5020995333174 36.8251567695027 -0.430666666666667 -0.627666666666667 0.00890820179999635 0.000207722874142981 -3.98754455179814 -8.79103704862761 Q15691 MAPRE1 Q15691.S155.p_MAPRE1 Q15691_S155s _1_1_155_155 Q15691 Q15691 Microtubule-associated protein RP/EB family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8214.8214.4 8.34 8.34 8.335 6 1 1 0 616.5933 2383.3822 S155s TMT10 151 (K) KPLTsSSAAPQRPISTQR (T) KPLT(0.0)S(0.99)S(0.0)S(0.0)AAPQRPIS(0.0)T(0.0)QR K:TMT10,s:Phosphorylated S MAPRE1 30169.7 4 1 6306.1 12.47 HUMAN 1 -20.5021 -36.8252 KPKKRRKSYRSFLPE-p Q9C0C9;S1240-p KPKKRRKSYRSFLPE 0.0969394664773803 0.87297658743874 -0.692666666666667 -0.0723333333333333 21.5056036407123 0.831909890494593 -0.692666666666667 -0.0723333333333333 0.00707032920934275 0.825674763940249 -4.20977985322702 -0.231144245409474 Q9C0C9 UBE2O Q9C0C9.S1240.p_UBE2O Q9C0C9_S1240s _1_1_1240_1240 Q9C0C9 Q9C0C9 (E3-independent) E2 ubiquitin-conjugating enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18074.18074.3 9.76 9.76 2.156 3 1 1 0 555.6335 1584.915 S1240s TMT10 1240 (K) sYRSFLPEK (S) S(0.99)Y(0.0)RS(0.0)FLPEK K:TMT10,s:Phosphorylated S UBE2O 142717.3 2 16 308.1 373.27 HUMAN 1 -21.5056 -0.8319 KPKLQNATPTNFKTK-p Q9NXF1;T29-p KPKLQNATPTNFKTK 0.335984361418148 0.0856512748711876 0.167666666666667 -0.234666666666667 8.83597451433459 14.1241204859281 0.167666666666667 -0.234666666666667 0.130738214223991 0.0386890398040647 1.77996970717503 -2.71409014379946 Q9NXF1 TEX10 Q9NXF1.T29.p_TEX10 Q9NXF1_T29t _1_1_29_29 Q9NXF1 Q9NXF1|Q9NXF1-2 Testis-expressed protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16390.16390.3 11.48 11.48 4.652 2 1 1 0 557.9681 1591.9208 T29t TMT10 25 (K) LQNAtPTNFK (T) LQNAT(0.99)PT(0.0)NFK K:TMT10,t:Phosphorylated T TEX10 106413.9 3 1 5765.1 16.48 HUMAN 1 8.836 -14.1241 KPKNLELSPEGEEQE-p Q96D09;S534-p KPKNLELSPEGEEQE 0.981575064370413 0.170752749769222 -0.00366666666666668 0.155 0.161492276193867 10.0921333280465 -0.00366666666666668 0.155 0.963497899907537 0.09790089614926 -0.0479213784405674 1.99690588691321 Q96D09 GPRASP2 Q96D09.S534.p_GPRASP2 Q96D09_S534s _1_1_534_534 Q96D09 Q96D09 G-protein coupled receptor-associated sorting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31025.31025.3 26.26 26.26 3.747 7 1 1 0 1393.6273 4098.9294 S534s TMT10 530 (K) NLELsPEGEEQESLLQPDQPSPEFTFQYDPSYR (S) NLELS(0.99)PEGEEQES(0.0)LLQPDQPS(0.0)PEFT(0.0)FQY(0.0)DPS(0.0)Y(0.0)R s:Phosphorylated S GPRASP2 94342.1 3 5 1724.1 119.44 HUMAN 1 -0.1615 10.0921 KPKPKQASAASYFQK-p O75717;S974-p KPKPKQASAASYFQK 0.824470084373033 0.0378426783729656 0.0363333333333333 -0.281333333333333 1.61677440200854 19.0960261761752 0.0363333333333333 -0.281333333333333 0.689163963121085 0.0123139499021274 0.422155997360575 -3.68432693032814 O75717 WDHD1 O75717.S974.p_WDHD1 O75717_S974s _1_1_974_974 O75717 O75717|O75717-2 WD repeat and HMG-box DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16097.16097.3 8.57 8.57 1.12 3 1 1 0 546.9479 1558.863 S974s TMT10 972 (K) QAsAASYFQK (R) QAS(0.99)AAS(0.0)Y(0.0)FQK K:TMT10,s:Phosphorylated S WDHD1 127448.5 1 11 554.1 273.24 HUMAN 1 1.6168 -19.096 KPKPLWLSPEKPLAW-p O60303;S777-p KPKPLWLSPEKPLAW 0.0684521497222417 0.00248584650157384 -0.599333333333333 -0.697333333333333 25.1195158489444 39.8876490313667 -0.599333333333333 -0.697333333333333 0.00307643975682224 0.000102620729326023 -5.07411029371034 -10.0809410662007 O60303 KIAA0556 O60303.S777.p_KIAA0556 O60303_S777s _1_1_777_777 O60303 O60303 Protein KIAA0556 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31357.31357.3 11.34 11.34 99 1 1 1 0 778.1198 2252.3774 S777s TMT10 773 (K) PLWLsPEKPLAWK (G) PLWLS(1.0)PEKPLAWK K:TMT10,s:Phosphorylated S KIAA0556 182055.4 1 9 1063.1 181.85 HUMAN 1 -25.1195 -39.8876 KPKPNPPSPENTASS-p Q5T0Z8;S449-p KPKPNPPSPENTASS 0.434135403741661 0.0232251310177084 0.107666666666667 0.324666666666667 6.67821522518008 22.3001763013521 0.107666666666667 0.324666666666667 0.214871332705645 0.00588819751799408 1.40456037663803 4.38619151426104 Q5T0Z8 C6orf132 Q5T0Z8.S449.p_C6orf132 Q5T0Z8_S449s _1_1_449_449 Q5T0Z8 Q5T0Z8 Uncharacterized protein C6orf132 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17216.17216.5 20.46 20.46 2.364 8 1 1 0 926.6864 4549.4167 S449s TMT10 436 (K) SSSPALKPKPNPPsPENTASSAPVDWRDPSQMEK (L) S(0.0)S(0.0)S(0.0)PALKPKPNPPS(0.99)PENT(0.0)AS(0.0)S(0.0)APVDWRDPS(0.0)QMEK K:TMT10,s:Phosphorylated S C6orf132 124488.2 3 8 336.1 355.09 HUMAN 1 6.6782 22.3002 KPKPRSESELIDELS-p P20810-6;S449-p KPKPRSESELIDELS 0.108274227113564 0.614606926661213 -0.346 0.062 20.2647808313747 2.87324703545755 -0.346 0.062 0.00940853309415668 0.516030410977984 -3.93600701602734 0.694452489885764 P20810 CAST P20810.6.S449.p_CAST P20810-6_S449s _1_1_449_449 P20810-6 P20810-6|P20810-7|P20810-10|P20810-5|P20810-8|E9PCH5|P20810-4|E9PDE4|P20810-3|E7EQA0|A0A0C4DGB5|P20810-9|P20810-2|B7Z574|E7EVY3|A0A0A0MR45|E7EQ12 Isoform 6 of Calpastatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31388.31388.3 19.26 19.26 2.197 4 1 1 0 942.7654 2746.3129 S449s TMT10 447 (R) SEsELIDELSEDFDRSECK (E) S(0.0)ES(0.99)ELIDELS(0.0)EDFDRS(0.0)ECK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CAST 85340.8 9 11 314.1 369.19 HUMAN 1 -20.2648 2.8732 KPKVEMYSGSDDDDD-p O60841;S135-p KPKVEMYSGSDDDDD 0.82619699417303 0.00871550962883907 -0.0593333333333334 0.608333333333333 1.60121341052934 29.2061491660916 -0.0593333333333334 0.608333333333334 0.691637701661169 0.00120056335558938 -0.41855765245197 6.18471872694691 O60841 EIF5B O60841.S135.p_EIF5B O60841_S135s _1_1_135_135 O60841 O60841|A0A087WUT6 Eukaryotic translation initiation factor 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21025.21025.3 19.85 19.85 1.152 3 1 1 0 948.1215 2762.3798 S135s TMT10 131 (K) VEMYsGSDDDDDFNKLPK (K) VEMY(0.0)S(0.99)GS(0.0)DDDDDFNKLPK K:TMT10,s:Phosphorylated S EIF5B 139280.8 24 5 113.1 571.22 HUMAN 1 -1.6012 29.2061 KPKVPQST_______-p O76021;T490-p KPKVPQST_______ 0.310725057904401 0.00987532593183393 0.342333333333333 -0.644333333333333 9.48844469046296 28.209500608611 0.342333333333333 -0.644333333333333 0.112500779328653 0.00151025380693124 1.89295565487267 -5.89670408576425 O76021 RSL1D1 O76021.T490.p_RSL1D1 O76021_T490t _1_1_490_490 O76021 O76021 Ribosomal L1 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7785.7785.3 7.27 7.27 1.441 2 1 1 0 551.3303 1572.0088 T490t TMT10 483 (K) KPKVPQSt (-) KPKVPQS(0.0)T(0.99) K:TMT10,t:Phosphorylated T RSL1D1 55199.7 2 14 643.1 254.92 HUMAN 1 9.4884 -28.2095 KPKYAEISSDEDNDS-p Q6KC79;S1089-p KPKYAEISSDEDNDS 0.557101429711056 0.00474018699637445 -0.182666666666667 0.682833333333333 4.69077311022749 33.9890579723045 -0.182666666666667 0.682833333333333 0.339564819507638 0.000399111464198696 -1.04707324018687 7.72936416522388 Q6KC79 NIPBL Q6KC79.S1089.p_NIPBL Q6KC79_S1089sS1090s_2_2_1089_1090 Q6KC79 Q6KC79|Q6KC79-2 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16247.16247.3 12 12 3.816 6 2 2 0 885.6656 2495.0531 S1089s S1090s TMT10 1085 (K) YAEIssDEDNDSDEAFESSR (K) Y(0.0)AEIS(0.99)S(0.99)DEDNDS(0.0)DEAFES(0.0)S(0.0)R s:Phosphorylated S NIPBL 318099.5 3 32 50.1 752.87 HUMAN 2 -4.6908 33.9891 KPLDSAMSAEEDTDV-p Q99549-2;S319-p KPLDSAMSAEEDTDV 0.292435953133513 0.888376697742474 0.195666666666667 0.0146666666666667 10.0750906714045 0.722082428888627 0.195666666666667 0.0146666666666667 0.0982858352804336 0.846821268541819 1.99475935430169 0.202615994573317 Q99549 MPHOSPH8 Q99549.2.S319.p_MPHOSPH8 Q99549-2_S319s _1_1_319_319 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21179.21179.4 24.8 24.8 2.269 3 1 1 0 894.162 3493.6616 S319s TMT10 300 (R) AGQDMGLEHGFEKPLDSAMsAEEDTDVR (G) AGQDMGLEHGFEKPLDS(0.0)AMS(0.99)AEEDT(0.0)DVR K:TMT10,s:Phosphorylated S MPHOSPH8 98148.4 5 12 242.1 413.34 HUMAN 1 10.0751 0.7221 KPLFFDGSPEKPPED-p O94885;S320-p KPLFFDGSPEKPPED 0.409937115525965 0.0981329342831327 -0.238666666666667 0.179333333333333 7.1395777388564 13.3270233121986 -0.238666666666667 0.179333333333333 0.193215616992452 0.0464833766702991 -1.48542412321651 2.56871320184749 O94885 SASH1 O94885.S320.p_SASH1 O94885_S320s _1_1_320_320 O94885 O94885 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23124.23124.5 19.89 14.93 4.575 11 1 1 0 987.8955 4855.5084 S320s TMT10 313 (K) KPLFFDGsPEKPPEDDSDSLTTSPSSSSLDTWGAGRK (L) KPLFFDGS(0.99)PEKPPEDDS(0.0)DS(0.0)LT(0.0)T(0.0)S(0.0)PS(0.0)S(0.0)S(0.0)S(0.0)LDT(0.0)WGAGRK K:TMT10,s:Phosphorylated S SASH1 137734.8 1 5 295.1 379.69 HUMAN 1 -7.1396 13.327 KPLFSSASPQDSSPR-p Q5VW30;S328-p KPLFSSASPQDSSPR 0.264969933530389 0.11379554437592 -0.204666666666667 0.256 10.9391365065345 12.4470597200305 -0.204666666666667 0.256 0.0805538587871596 0.0569238188604837 -2.1454499324084 2.41063498218367 Q5VW30 NFIB Q5VW30.S328.p_NFIB Q5VW30_S328s _1_1_328_328 Q5VW30 Q5VW26|Q5VW30|O00712-5|Q5VW27|A0A1B0GU97|O00712-4|A0A0A0MRX8|A0A1B0GWJ4|A0A1B0GVN4|U3KQE8|A0A1B0GW37|O00712-6|A0A1B0GWB8|Q5VW31 Nuclear factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13078.13078.4 19.84 19.84 4.02 5 1 1 0 682.1191 2645.4866 S328s TMT10 318 (K) KPEKPLFSSAsPQDSSPR (L) KPEKPLFS(0.0)S(0.0)AS(0.99)PQDS(0.0)S(0.0)PR K:TMT10,s:Phosphorylated S NFIB 63015.1 8 11 655.1 253.73 HUMAN 1 -10.9391 12.4471 KPLIRSQSLRVVKRK-p Q9H6H4;S224-p KPLIRSQSLRVVKRK 0.205048524137417 0.267443264487513 -0.37 -0.515333333333333 13.3098267815878 7.54160313989153 -0.37 -0.515333333333333 0.0466677993401108 0.176132575659199 -2.5670488297145 -1.55506035099902 Q9H6H4 REEP4 Q9H6H4.S224.p_REEP4 Q9H6H4_S224s _1_1_224_224 Q9H6H4 Q9H6H4 Receptor expression-enhancing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11029.11029.3 8.5 8.5 2.165 2 1 1 0 485.6213 1374.8833 S224s TMT10 222 (R) SQsLRVVK (R) S(0.0)QS(0.99)LRVVK K:TMT10,s:Phosphorylated S REEP4 29565.8 2 5 1742.1 118.21 HUMAN 1 -13.3098 -7.5416 KPLKIKLSVPKAGEG-p Q9ULL5-3;S1230-p KPLKIKLSVPKAGEG 0.976894053422127 0.00160137763209639 0.00566666666666667 -1.42766666666667 0.200327945569772 44.7183860664367 0.00566666666666666 -1.42766666666667 0.95492047509753 3.37412675314689e-05 0.0591962606900129 -12.4717437729235 Q9ULL5 PRR12 Q9ULL5.3.S1230.p_PRR12 Q9ULL5-3_S1230s _1_1_1230_1230 Q9ULL5-3 Q9ULL5-3|Q9ULL5-2 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18454.18454.3 9.3 9.3 99 1 1 1 0 517.9999 1472.0179 S1230s TMT10 1227 (K) IKLsVPK (A) IKLS(1.0)VPK K:TMT10,s:Phosphorylated S PRR12 212010 2 15 182.1 477.91 HUMAN 1 0.2003 -44.7184 KPLKRLNSEPWGLVA-p Q69YU3;S247-p KPLKRLNSEPWGLVA 0.95183843847147 0.623835168718441 0.00966666666666666 -0.048 0.425049977366291 2.78683560394112 0.00966666666666666 -0.048 0.906765529725609 0.526400677553585 0.122709956533605 -0.676682189048397 Q69YU3 ANKRD34A Q69YU3.S247.p_ANKRD34A Q69YU3_S247s _1_1_247_247 Q69YU3 Q69YU3 Ankyrin repeat domain-containing protein 34A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25800.25800.4 16.85 14.43 16.854 2 1 1 0 776.4066 3022.6312 S247s TMT10 245 (R) LNsEPWGLVAPPQPVPPTEGRPGIER (L) LNS(0.99)EPWGLVAPPQPVPPT(0.0)EGRPGIER s:Phosphorylated S ANKRD34A 52919.9 2 3 922.1 199.97 HUMAN 1 0.425 -2.7868 KPLLPGQTPEAAKEA-p Q9UN36;T20-p KPLLPGQTPEAAKEA 0.0887101773057385 0.537425590250378 -0.331333333333333 0.0583333333333333 22.4192475112741 3.62772357846241 -0.331333333333333 0.0583333333333334 0.00572895286195515 0.433738169367247 -4.41846463279 0.845130702247438 Q9UN36 NDRG2 Q9UN36.T20.p_NDRG2 Q9UN36_T20t _1_1_20_20 Q9UN36 Q9UN36 Protein NDRG2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27526.27526.4 18.93 19.86 4.498 2 1 1 0 800.6783 3119.724 T20t Acetyl 2 (M) AELQEVQITEEKPLLPGQtPEAAK (E) AELQEVQIT(0.0)EEKPLLPGQT(0.99)PEAAK K:TMT10,t:Phosphorylated T NDRG2 41139.8 1 1 2649.1 75.22 HUMAN 1 -22.4192 3.6277 KPLLRRASAYEALEK-p Q15785;S93-p KPLLRRASAYEALEK 0.133015503975615 0.0477102565539202 -0.354666666666667 0.261 18.0604375944547 17.674457015982 -0.354666666666667 0.261 0.0156299014805864 0.0170826128496382 -3.47450701665541 3.39396332221294 Q15785 TOMM34 Q15785.S93.p_TOMM34 Q15785_S93s _1_1_93_93 Q15785 Q15785 Mitochondrial import receptor subunit TOM34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11904.11904.3 12.39 12.39 6.717 2 1 1 0 559.3002 1595.9157 S93s TMT10 91 (R) RAsAYEALEK (Y) RAS(0.99)AY(0.0)EALEK K:TMT10,s:Phosphorylated S TOMM34 34958.1 2 1 4280.1 34.32 HUMAN 1 -18.0604 17.6745 KPLRHQASLIRSFSV-p Q8NFH8-4;S253-p KPLRHQASLIRSFSV 0.992821359885708 0.168831122322827 -0.00166666666666668 0.138333333333333 0.0645621765879979 10.1611904478818 -0.00166666666666666 0.138333333333333 0.985243962769805 0.0963564863929105 -0.0193649540073658 2.00890200071727 Q8NFH8 REPS2 Q8NFH8.4.S253.p_REPS2 Q8NFH8-4_S253s _1_1_253_253 Q8NFH8-4 Q8NFH8|Q8NFH8-4|Q8NFH8-2|Q8NFH8-3 Isoform 4 of RalBP1-associated Eps domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5497.5497.2 10.08 4.73 99 1 1 1 0 567.3047 1053.6366 S253s TMT10 250 (R) HQAsLIR (S) HQAS(1.0)LIR s:Phosphorylated S REPS2 71917.6 1 4 226.3 425.21 HUMAN 1 -0.0646 10.1612 KPLRRALSGRASPVP-p Q9P206-3;S869-p KPLRRALSGRASPVP 0.420388213666819 0.685668864847942 0.215 -0.0396666666666667 6.94256693887026 2.2430877671088 0.215 -0.0396666666666667 0.20218238072408 0.596610954523317 1.45095606761112 -0.56191882307192 Q9P206 KIAA1522 Q9P206.3.S869.p_KIAA1522 Q9P206-3_S869sS873s_2_2_869_873 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12951.12951.4 9.9 9.9 9.905 4 2 2 0 598.3045 2230.2618 S869s S873s TMT10 867 (R) ALsGRAsPVPAPSSGLHAAVR (L) ALS(0.99)GRAS(0.99)PVPAPS(0.0)S(0.0)GLHAAVR s:Phosphorylated S KIAA1522 108782.6 3 47 62.1 704.36 HUMAN 1 6.9426 -2.2431 KPLSKQKSEEELKDK-p Q9Y448;S171-p KPLSKQKSEEELKDK 0.218741136565907 0.00449046033072572 -0.184 -0.926666666666667 12.7197240343607 34.4469144995144 -0.184 -0.926666666666667 0.0534598328532762 0.00035917702591264 -2.46068321958363 -7.89280720312931 Q9Y448 KNSTRN Q9Y448.S171.p_KNSTRN Q9Y448_S171s_1_1_171_171 Q9Y448 Q9Y448|Q9Y448-2|Q9Y448-3|V9GY01 Small kinetochore-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21294.21294.4 16.75 7.68 99 1 1 1 0 806.4503 3159.8395 Q169q S171s Hydrogen 169 (K) qKsEEELKDKNQLLEAVNK (Q) Q(1.0)KS(1.0)EEELKDKNQLLEAVNK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S KNSTRN 35723 10 2 3464.1 50.32 HUMAN 1 -12.7197 -34.4469 KPLVALDTDSDDDFD-p Q8IW50-6;T96-p KPLVALDTDSDDDFD 0.995103621521408 0.227453984781974 -0.000999999999999996 0.128666666666667 0.0423457046515815 8.47143301629657 -0.000999999999999993 0.128666666666667 0.990296922772877 0.142185954696826 -0.0127332117585269 1.71628170677799 Q8IW50 FAM219A Q8IW50.6.T96.p_FAM219A Q8IW50-6_T96tS98s_2_2_96_98 Q8IW50-6 Q8IW50|A0A0A0MRW3|Q8IW50-4|A0A0A0MRW0|Q8IW50-6|Q8IW50-5|A0A0A0MRW2|Q5T586|Q8IW50-2|Q8IW50-3|A0A0A0MRW1 Isoform 6 of Protein FAM219A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.26722.27334.4 17.53 17.53 7.044 7 2 2 0 959.92 3676.7213 T96t S98s TMT10 78 (K) GYSSLDQSPDEKPLVALDtDsDDDFDMSR (Y) GY(0.0)S(0.0)S(0.0)LDQS(0.0)PDEKPLVALDT(0.99)DS(0.99)DDDFDMS(0.0)R K:TMT10,t:Phosphorylated T,s:Phosphorylated S FAM219A 18841.5 4 6 1822.1 112.63 HUMAN 1 -0.0423 8.4714 KPNFIIKTPKGTRDL-p P49590;T59-p KPNFIIKTPKGTRDL 0.640733043867829 0.145103408579798 -0.148666666666667 0.26 3.61060603349514 11.0414699889737 -0.148666666666667 0.26 0.43545110469597 0.0786779437507259 -0.841924143917454 2.16239699648693 P49590 HARS2 P49590.T59.p_HARS2 P49590_T59t _1_1_59_59 P49590 P49590 Probable histidine--tRNA ligase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13438.13438.5 15.84 15.84 99 1 1 1 0 530.3166 2567.5843 T59t TMT10 48 (K) AHQEKPNFIIKtPK (G) AHQEKPNFIIKT(1.0)PK K:TMT10,t:Phosphorylated T HARS2 57629 3 1 2851.1 68.07 HUMAN 1 -3.6106 11.0415 KPNKDLESCSDDDNQ-p Q5T3I0;S128-p KPNKDLESCSDDDNQ 0.137378774237888 0.0660840635677049 -0.468 -0.212666666666667 17.6569070207875 15.6924862739063 -0.468 -0.212666666666667 0.0171517839659008 0.0269619545712851 -3.39315971941155 -3.00729011195877 Q5T3I0 NotFound Q5T3I0.S128.p_NotFound Q5T3I0_S128sS130s_2_2_128_130 Q5T3I0 Q5T3I0-3|E9PAV9|A0A0A0MRK1 G patch domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16233.16233.3 13.02 13.02 5.187 6 2 2 0 1320.9521 3800.9089 S128s S130s TMT10 112 (K) MATLTSGGEKPNKDLEsCsDDDNQGSK (S) MAT(0.0)LT(0.0)S(0.0)GGEKPNKDLES(0.99)CS(0.99)DDDNQGS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GPATCH4 50608.5 11 6 2093.1 97.96 HUMAN 1 -17.6569 -15.6925 KPPLSASSPQQRPPE-p Q9Y3Q8;S190-p KPPLSASSPQQRPPE 0.0814186305458657 0.00815813217337322 -0.355333333333333 -0.548666666666667 23.2673899202183 29.7475287765521 -0.355333333333333 -0.548666666666667 0.00471260465584634 0.00105985663348996 -4.61792423596628 -6.34572780780385 Q9Y3Q8 TSC22D4 Q9Y3Q8.S190.p_TSC22D4 Q9Y3Q8_S190s _1_1_190_190 Q9Y3Q8 Q9Y3Q8 TSC22 domain family protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9688.9688.5 17.72 13.33 1.106 7 1 1 0 772.4073 3778.0338 S190s TMT10 179 (K) AKAEKPPLSASsPQQRPPEPETGESAGTSR (A) AKAEKPPLS(0.0)AS(0.0)S(0.99)PQQRPPEPET(0.0)GES(0.0)AGT(0.0)S(0.0)R K:TMT10,s:Phosphorylated S TSC22D4 41082.3 3 6 648.1 254.5 HUMAN 1 -23.2674 -29.7475 KPPPSPLSPVPSVVK-p C9K0J5;S908-p KPPPSPLSPVPSVVK 0.0333915231240893 0.00171039759294762 -0.584333333333333 -0.846666666666667 34.3952492769 43.9290355336062 -0.584333333333333 -0.846666666666667 0.000363475441137648 4.04665748510709e-05 -7.88916357500668 -12.0480349865612 C9K0J5 RAPH1 C9K0J5.S908.p_RAPH1 C9K0J5_S908s _1_1_908_908 C9K0J5 C9K0J5|Q70E73 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22071.22071.3 14.01 9.74 1.277 4 1 1 0 1006.556 2937.6839 S908s TMT10 895 (K) QQSFCAKPPPSPLsPVPSVVK (Q) QQS(0.0)FCAKPPPS(0.0)PLS(0.99)PVPS(0.0)VVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RAPH1 141861.7 2 6 619.1 260.34 HUMAN 1 -34.3952 -43.929 KPPPTYESEEEDKCK-p O60885;S601-p KPPPTYESEEEDKCK 0.473025507918826 0.0262131533787029 0.100666666666667 -0.408333333333333 5.99000855672404 21.4998732375606 0.100666666666667 -0.408333333333333 0.251767196728932 0.00707966448299525 1.28278347556121 -4.20417444061323 O60885 BRD4 O60885.S601.p_BRD4 O60885_S601s _1_1_601_601 O60885 O60885|O60885-3|O60885-2 Bromodomain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9028.9439.3 19.98 17.54 5.312 4 1 1 0 801.7359 2323.2272 S601s TMT10 593 (K) SKPPPTYEsEEEDK (C) S(0.0)KPPPT(0.0)Y(0.0)ES(0.99)EEEDK K:TMT10,s:Phosphorylated S BRD4 152672.5 14 2 941.1 198.07 HUMAN 1 5.99 -21.4999 KPPSGRQTPQPLRHQ-p Q5T5U3;T746-p KPPSGRQTPQPLRHQ 0.643274882960236 0.295951732955899 0.0666666666666667 0.103 3.58105937961427 6.98153950918469 0.0666666666666666 0.103 0.438423739514219 0.200376159784408 0.836150838106688 1.45737983746376 Q5T5U3 ARHGAP21 Q5T5U3.T746.p_ARHGAP21 Q5T5U3_T746t _1_1_746_746 Q5T5U3 Q5T5U3|A0A1B0GV73|F8W9U9|Q5T5U3-3 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5946.5946.4 11.11 6.12 2.776 2 1 1 0 533.0461 2049.1969 T746t TMT10 738 (R) EKPPSGRQtPQPLR (H) EKPPS(0.0)GRQT(0.99)PQPLR K:TMT10,t:Phosphorylated T ARHGAP21 218696.3 4 11 148.1 512.52 HUMAN 1 3.5811 6.9815 KPPTPKESPHFYRKG-p Q9HDC5;S452-p KPPTPKESPHFYRKG 0.0552688318450056 0.365018451577499 -0.862 -0.172333333333333 27.3997977157275 5.80224179564453 -0.862 -0.172333333333333 0.00181978561801917 0.262891061758716 -5.67839327293388 -1.24896531316057 Q9HDC5 JPH1 Q9HDC5.S452.p_JPH1 Q9HDC5_S452s _1_1_452_452 Q9HDC5 Q9HDC5 Junctophilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12414.12414.4 12.69 6.55 2.169 3 1 1 0 669.8683 2596.4855 S452s TMT10 442 (K) VPEKPPTPKEsPHFYR (K) VPEKPPT(0.0)PKES(0.99)PHFY(0.0)R K:TMT10,s:Phosphorylated S JPH1 72141.1 3 7 675.1 247.46 HUMAN 1 -27.3998 -5.8022 KPPTRSPSPPTQHTG-p Q68EM7;S676-p KPPTRSPSPPTQHTG 0.206108312152609 0.76915098289621 0.248666666666667 0.0383333333333334 13.2643325316351 1.57529050628399 0.248666666666667 0.0383333333333333 0.0471592344922217 0.695778411451797 2.55880913048411 0.41250394941601 Q68EM7 ARHGAP17 Q68EM7.S676.p_ARHGAP17 Q68EM7_S676s _1_1_676_676 Q68EM7 Q68EM7|Q68EM7-5|Q68EM7-6|Q68EM7-2|Q68EM7-3|Q68EM7-7 Rho GTPase-activating protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10514.10514.3 23.64 19 1.209 7 1 1 0 972.8107 2836.4539 S676s TMT10 674 (R) SPsPPTQHTGQPPGQPSAPSQLSAPR (R) S(0.0)PS(0.99)PPT(0.0)QHT(0.0)GQPPGQPS(0.0)APS(0.0)QLS(0.0)APR s:Phosphorylated S ARHGAP17 95834.3 5 3 2036.1 101.4 HUMAN 1 13.2643 1.5753 KPPTSPSSPPAPVPR-p O75161;S481-p KPPTSPSSPPAPVPR 0.978588331593317 0.0516989380276643 -0.00499999999999999 -0.343666666666667 0.185969882804224 17.1679185637287 -0.005 -0.343666666666667 0.95808272976719 0.0191958851838537 -0.0550385825500288 -3.29324084279802 O75161 NPHP4 O75161.S481.p_NPHP4 O75161_S481s _1_1_481_481 O75161 O75161|O75161-2 Nephrocystin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11270.11270.3 9.94 9.94 1.109 4 1 1 0 685.0465 1973.1584 S481s TMT10 474 (R) KPPTSPSsPPAPVPR (V) KPPT(0.0)S(0.0)PS(0.0)S(0.99)PPAPVPR K:TMT10,s:Phosphorylated S NPHP4 158850.4 1 4 3191.1 58.08 HUMAN 1 -0.186 -17.1679 KPPVGPKTSPLKDNP-p Q96JC9;T157-p KPPVGPKTSPLKDNP 0.41751649911322 0.820951185808648 0.131 -0.038 7.00174384970054 1.19835895383973 0.131 -0.038 0.199446130568399 0.758864268987511 1.46131846059554 -0.32288765812262 Q96JC9 EAF1 Q96JC9.T157.p_EAF1 Q96JC9_T157tS165s_2_2_157_165 Q96JC9 Q96JC9|Q96JC9-2 ELL-associated factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17353.17353.5 13.14 7.23 1.214 3 2 2 0 600.5126 2837.5976 T157t N163n S165s TMT10 157 (K) tSPLKDnPsPEPQLDDIKR (E) T(0.99)S(0.0)PLKDN(1.0)PS(0.99)PEPQLDDIKR K:TMT10,t:Phosphorylated T,n:Deamidated,s:Phosphorylated S EAF1 29212.6 14 7 2357.1 86.81 HUMAN 1 7.0017 -1.1984 KPPYRSHSLSPSPVN-p Q96GE4;S449-p KPPYRSHSLSPSPVN 0.996421434325015 0.248467787467162 -0.000666666666666667 -0.118 0.0285966760725919 7.96677692039123 -0.000666666666666667 -0.118 0.993437003155826 0.159706395498369 -0.00861237885203649 -1.62888271239501 Q96GE4 CEP95 Q96GE4.S449.p_CEP95 Q96GE4_S449sS451s_2_2_449_451 Q96GE4 Q96GE4|A0A0A0MTQ1|Q96GE4-2 Centrosomal protein of 95 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10222.10430.3 8.82 8.82 2.338 4 2 2 0 590.9581 1610.9266 S449s S451s TMT10 447 (R) SHsLsPSPVNK (H) S(0.0)HS(0.99)LS(0.99)PS(0.0)PVNK K:TMT10,s:Phosphorylated S CEP95 95922.6 2 9 2407.1 84.85 HUMAN 1 -0.0286 -7.9668 KPQKLARSPARISPH-p P29374;S1140-p KPQKLARSPARISPH 0.192627910278709 0.490623322344547 0.199666666666667 -0.0943333333333333 13.9614629935772 4.13273013736075 0.199666666666667 -0.0943333333333333 0.0401655483691167 0.386124168665268 2.68584574943831 -0.942254051237248 P29374 ARID4A P29374.S1140.p_ARID4A P29374_S1140s _1_1_1140_1140 P29374 P29374 AT-rich interactive domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.3922.3922.3 8.97 1.48 99 1 1 1 0 360.5351 999.6261 S1140s TMT10 1137 (K) LARsPAR (I) LARS(1.0)PAR s:Phosphorylated S ARID4A 143719.1 3 9 532.1 280.77 HUMAN 1 13.9615 -4.1327 KPQKLRVSCEAPGDG-p Q9BXV9;S20-p KPQKLRVSCEAPGDG 0.157126434170749 0.111883132570667 -0.253333333333333 -0.171333333333333 16.1244209947913 12.5551269219793 -0.253333333333333 -0.171333333333333 0.0244094447520596 0.0555248389822799 -3.09211700086512 -2.42992460238802 Q9BXV9 C14orf142 Q9BXV9.S20.p_C14orf142 Q9BXV9_S20s _1_1_20_20 Q9BXV9 Q9BXV9 EKC/KEOPS complex subunit GON7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32930.32930.4 22.45 22.45 12.275 2 1 1 0 793.4022 3090.6116 S20s TMT10 17 (K) LRVsCEAPGDGDPFQGLLSGVAQMK (D) LRVS(0.99)CEAPGDGDPFQGLLS(0.0)GVAQMK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GON7 10915.7 3 1 5144.1 22.45 HUMAN 1 -16.1244 -12.5551 KPQKRPLTPFHHRVS-p Q9UHV7;T474-p KPQKRPLTPFHHRVS 0.849516481351664 0.0320687122379841 -0.126 1.01166666666667 1.3709185884406 20.1701807006969 -0.126 1.01166666666667 0.729303236966415 0.00961572268574393 -0.364495182162056 3.91186821382874 Q9UHV7 MED13 Q9UHV7.T474.p_MED13 Q9UHV7_T474t _1_1_474_474 Q9UHV7 Q9UHV7 Mediator of RNA polymerase II transcription subunit 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.4726.4726.4 7.31 7.31 99 1 1 1 0 368.1989 1389.8065 T474t TMT10 471 (K) RPLtPFHHR (V) RPLT(1.0)PFHHR t:Phosphorylated T MED13 242830 2 2 1738.1 118.41 HUMAN 1 -1.3709 20.1702 KPQKSVVSDLEADDV-p P11388-2;S1403-p KPQKSVVSDLEADDV 0.0969394664773803 0.00385345951604038 -0.658 -0.626666666666667 21.4972107180133 35.7035183410666 -0.658 -0.624484828476343 0.00708400612792203 0.000268935519930073 -4.20789147694069 -8.35684328980239 P11388 TOP2A P11388.2.S1403.p_TOP2A P11388-2_S1403s _1_1_1403_1403 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23099.23099.2 17.72 11.86 5.005 2 1 1 0 907.9637 1734.9526 S1403s TMT10 1400 (K) SVVsDLEADDVK (G) S(0.0)VVS(0.99)DLEADDVK K:TMT10,s:Phosphorylated S TOP2A 178239.3 4 11 71.2 658.36 HUMAN 1 -21.4972 -35.7035 KPRAGAASPLNSPLS-p O75962;S2455-p KPRAGAASPLNSPLS 0.590863718677233 0.609819678281077 0.0993333333333333 0.075 4.21089473119841 2.91798373864634 0.0993333333333333 0.075 0.379236846750042 0.510742062732809 0.957233707086166 0.703606851991585 O75962 TRIO O75962.S2455.p_TRIO O75962_S2455s _1_1_2455_2455 O75962 O75962|O75962-4|O75962-5 Triple functional domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29138.29338.5 19.22 19.64 2.29 7 1 1 0 760.616 3719.0987 S2455s TMT10 2451 (R) AGAAsPLNSPLSSAVPSLGKEPFPPSSPLQK (G) AGAAS(0.99)PLNS(0.0)PLS(0.0)S(0.0)AVPS(0.0)LGKEPFPPS(0.0)S(0.0)PLQK K:TMT10,s:Phosphorylated S TRIO 349974.9 4 21 450.1 308.79 HUMAN 1 4.2109 2.918 KPREMSKSYHDLSQA-p Q12923-4;S969-p KPREMSKSYHDLSQA 0.402397335471032 0.776089509390509 -0.295333333333333 -0.0293333333333333 7.29717702022976 1.52327549107007 -0.295333333333333 -0.0293333333333333 0.186329791491413 0.704161783001035 -1.51293873893642 -0.400390991731421 Q12923 PTPN13 Q12923.4.S969.p_PTPN13 Q12923-4_S969s _1_1_969_969 Q12923-4 Q12923-4|Q12923-3 Isoform 4 of Tyrosine-protein phosphatase non-receptor type 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11007.11007.5 8.66 8.66 1.344 5 1 1 0 468.8444 2260.2239 S969s TMT10 969 (K) sYHDLSQASLYPHRK (N) S(0.99)Y(0.0)HDLS(0.0)QAS(0.0)LY(0.0)PHRK K:TMT10,s:Phosphorylated S PTPN13 279614.3 1 7 518.1 284.65 HUMAN 1 -7.2972 -1.5233 KPRGREFSFEAWNAK-p P78347;S722-p KPRGREFSFEAWNAK 0.771638354290043 0.101622256507743 -0.046 0.187666666666667 2.15702156461718 13.1174818415432 -0.046 0.187666666666667 0.608552209445897 0.0487811254455631 -0.543301474412525 2.53085461787812 P78347 GTF2I P78347.S722.p_GTF2I P78347_S722s _1_1_722_722 P78347 P78347|P78347-3 General transcription factor II-I HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20386.20386.3 10.32 10.32 99 1 1 1 0 660.6641 1900.0118 S722s TMT10 718 (R) GREFsFEAWNAK (I) GREFS(1.0)FEAWNAK K:TMT10,s:Phosphorylated S GTF2I 112927.8 1 11 140.1 523.54 HUMAN 1 -2.157 13.1175 KPRGRKKTPVTEQEE-p Q9NTI5;T1220-p KPRGRKKTPVTEQEE 0.0577830872576393 0.0132265271701598 -0.513 0.418 27.0095883675378 26.1504828316855 -0.513 0.418 0.00199086202768498 0.00242634032902179 -5.57141981406485 5.3341248209315 Q9NTI5 PDS5B Q9NTI5.T1220.p_PDS5B Q9NTI5_T1220t _1_1_1220_1220 Q9NTI5 Q9NTI5|Q9NTI5-2 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7143.7143.3 7.53 2.63 1.256 2 1 1 0 771.7769 2233.3574 T1220t TMT10 1218 (R) KKtPVTEQEEK (L) KKT(0.99)PVT(0.0)EQEEK K:TMT10,t:Phosphorylated T PDS5B 165919.5 4 9 100.1 597.99 HUMAN 1 -27.0096 26.1505 KPRHKIISIFSGTEK-p Q13177;S55-p KPRHKIISIFSGTEK 0.74843463214063 0.886483235534219 -0.0736666666666667 0.0163333333333334 2.39188088311952 0.735711891666385 -0.0736666666666667 0.0163333333333334 0.576516726066592 0.844167855320405 -0.593938419410838 0.206184484089147 Q13177 PAK2 Q13177.S55.p_PAK2 Q13177_S55s _1_1_55_55 Q13177 Q13177 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29913.29913.2 14.22 7.96 3.729 3 1 1 0 816.9543 1552.9351 S55s TMT10 53 (K) IIsIFSGTEK (G) IIS(0.99)IFS(0.0)GT(0.0)EK K:TMT10,s:Phosphorylated S PAK2 58326.8 2 17 272.1 393.22 HUMAN 1 -2.3919 0.7357 KPRHRSNSFSDEREF-p Q09666;S5782-p KPRHRSNSFSDEREF 0.198300279868763 0.0949906541206792 -0.229666666666667 -0.195 13.6838311037334 13.5190229666348 -0.229666666666667 -0.195 0.0428170645485506 0.0444731307527421 -2.63505054739858 -2.60352903200719 Q09666 AHNAK Q09666.S5782.p_AHNAK Q09666_S5782sS5784s_2_2_5782_5784 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5665.5665.2 8.25 1.05 2.117 3 2 2 0 665.7498 1170.5588 S5782s S5784s TMT10 5780 (R) SNsFsDER (E) S(0.0)NS(0.99)FS(0.99)DER s:Phosphorylated S AHNAK 629603.7 27 183 1.1 4313.36 HUMAN 1 -13.6838 -13.519 KPRISPRSPPRASPR-p E7ESC5;S263-p KPRISPRSPPRASPR 0.600212780596022 0.427028106063986 -0.145666666666667 -0.108333333333333 4.0947144999648 4.9188143303335 -0.145666666666667 -0.108333333333333 0.389518913372818 0.322194829703278 -0.935191603094671 -1.08894212337966 E7ESC5 NotFound E7ESC5.S263.p_NotFound E7ESC5_S263s _1_1_263_263 E7ESC5 E7ESC5|F5GZA4 Coiled-coil domain-containing protein 74B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5811.5811.3 7.32 7.32 7.322 2 1 1 0 406.8897 1138.6894 S263s TMT10 259 (R) ISPRsPPR (A) IS(0.0)PRS(0.99)PPR s:Phosphorylated S CCDC74B 29927.1 1 3 4565.1 29.74 HUMAN 1 -4.0947 -4.9188 KPRKRQLSEEQPSGN-p Q9H4Z3;S116-p KPRKRQLSEEQPSGN 0.411970467877201 0.0396874694327268 0.240666666666667 -0.341666666666667 7.10507270755458 18.7931814534886 0.240666666666667 -0.341666666666667 0.194756844438785 0.0132032806461034 1.47939339247199 -3.62147608514913 Q9H4Z3 PCIF1 Q9H4Z3.S116.p_PCIF1 Q9H4Z3_S116s _1_1_116_116 Q9H4Z3 Q9H4Z3 Phosphorylated CTD-interacting factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10507.10507.2 18.65 18.65 6.224 2 1 1 0 955.9847 1830.9962 S116s TMT10 114 (R) QLsEEQPSGNGVK (K) QLS(0.99)EEQPS(0.0)GNGVK K:TMT10,s:Phosphorylated S PCIF1 81581.1 21 3 1892.1 108.77 HUMAN 1 7.1051 -18.7932 KPRKVELSESEEDKG-p A9Z1X7;S458-p KPRKVELSESEEDKG 0.350372223299442 0.352637774652151 0.132333333333333 0.0896666666666667 8.46251991874051 6.00055337566889 0.132333333333333 0.0896666666666667 0.142478064934559 0.251156638869571 1.71531639733732 1.28435660092375 A9Z1X7 NotFound A9Z1X7.S458.p_NotFound A9Z1X7_S458s _1_1_458_458 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11875.11875.3 16.62 12.02 1.178 2 1 1 0 687.3641 1980.1104 S458s TMT10 454 (R) KVELsESEEDK (G) KVELS(0.99)ES(0.0)EEDK K:TMT10,s:Phosphorylated S SRRM1 103445.7 20 15 8.1 1346.57 HUMAN 1 8.4625 6.0006 KPRNQGGYGGSSSSS-p P09651;Y357-p KPRNQGGYGGSSSSS 0.661198352552531 0.17684933441719 0.417 0.5915 3.36391488180394 9.89617847678969 0.417 0.5915 0.460901914196072 0.102419382319265 0.793406057472582 2.05471246266657 P09651 HNRNPA1 P09651.Y357.p_HNRNPA1 P09651_Y357y _1_1_357_357 P09651 P09651|P09651-2|F8W6I7|P09651-3 Heterogeneous nuclear ribonucleoprotein A1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.4747.4747.3 21.94 21.94 1.394 9 1 1 0 668.6149 1923.863 Y357y TMT10 353 (R) NQGGyGGSSSSSSYGSGR (R) NQGGY(0.99)GGS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)Y(0.0)GS(0.0)GR y:Phosphorylated Y HNRNPA1 38860.1 1 3 7.1 110.22 HUMAN 1 3.3639 9.8962 KPRPPPLSPLGGPVP-p Q15642;S335-p KPRPPPLSPLGGPVP 0.419598745385739 0.570503345439926 0.142 -0.118333333333333 6.96228675240302 3.28494841642487 0.142 -0.118333333333333 0.201266421414164 0.469359009122525 1.45441008047116 -0.777602199442963 Q15642 TRIP10 Q15642.S335.p_TRIP10 Q15642_S335sS351s_2_2_335_351 Q15642 Q15642 Cdc42-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21359.21359.4 11.83 11.83 2.03 3 2 2 0 829.4444 3154.8253 S335s S351s TMT10 327 (K) NKPRPPPLsPLGGPVPSALPNGPPsPR (S) NKPRPPPLS(0.99)PLGGPVPS(0.0)ALPNGPPS(0.99)PR K:TMT10,s:Phosphorylated S TRIP10 68579.3 1 5 2083.1 98.23 HUMAN 1 6.9623 -3.2849 KPRSSVDTPPRLSTP-p Q68DK7;T396-p KPRSSVDTPPRLSTP 0.647361671161003 0.0648328206705399 -0.087 -0.214666666666667 3.53741119898794 15.8118516388681 -0.087 -0.214666666666667 0.442852275045227 0.0262309993157846 -0.827603777340339 -3.03003672657883 Q68DK7 MSL1 Q68DK7.T396.p_MSL1 Q68DK7_T396t _1_1_396_396 Q68DK7 Q68DK7|J3KSZ8|J3QQY0|Q68DK7-2|Q68DK7-3 Male-specific lethal 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11818.11818.3 16.3 12.12 2.115 5 1 1 0 684.3697 1971.1275 T396t TMT10 392 (R) SSVDtPPRLSTPQK (G) S(0.0)S(0.0)VDT(0.99)PPRLS(0.0)T(0.0)PQK K:TMT10,t:Phosphorylated T MSL1 67811.9 4 10 324.1 362.01 HUMAN 1 -3.5374 -15.8119 KPSDDENSDNSNECV-p O60291-2;S272-p KPSDDENSDNSNECV 0.994167574639875 0.824279789441214 -0.00133333333333334 -0.0386666666666667 0.0501058162375303 1.17604380563785 -0.00133333333333333 -0.0386666666666667 0.988529008766123 0.762773540222849 -0.0150534120722469 -0.317440260932563 O60291 MGRN1 O60291.2.S272.p_MGRN1 O60291-2_S272s _1_1_272_272 O60291-2 O60291-2|O60291-3 Isoform 2 of E3 ubiquitin-protein ligase MGRN1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25306.25306.4 7.94 7.94 7.943 6 1 1 0 1162.29 4566.1547 S272s TMT10 260 (K) NNQETKPSDDENsDNSNECVVCLSDLRDTLILPCR (H) NNQET(0.0)KPS(0.0)DDENS(0.99)DNS(0.0)NECVVCLS(0.0)DLRDT(0.0)LILPCR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MGRN1 63873.2 1 4 1708.1 120.05 HUMAN 1 -0.0501 -1.176 KPSIESYSEDDESKF-p P25054;S987-p KPSIESYSEDDESKF 0.157740486556682 0.014415910682686 -0.331666666666667 -0.531666666666667 16.0893129881219 25.5276276717712 -0.331666666666667 -0.531666666666667 0.0246075684129911 0.0028005106773806 -3.08535813937643 -5.17202827073285 P25054 APC P25054.S987.p_APC P25054_S987s _1_1_987_987 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13488.13488.3 18.6 18.6 2.904 5 1 1 0 899.7673 2617.327 S987s TMT10 977 (R) GQMKPSIESYsEDDESK (F) GQMKPS(0.0)IES(0.0)Y(0.0)S(0.99)EDDES(0.0)K K:TMT10,s:Phosphorylated S APC 313808.5 7 10 33.1 890.71 HUMAN 1 -16.0893 -25.5276 KPSNCAASTEKIYIR-p P49116;S207-p KPSNCAASTEKIYIR 0.220624742520454 0.0242345985459333 0.201333333333333 -0.360333333333333 12.6378815745333 22.0146340971318 0.201333333333333 -0.360333333333333 0.0544768318124323 0.00628834832635125 2.4460152538252 -4.32070362496941 P49116 NR2C2 P49116.S207.p_NR2C2 P49116_S207s _1_1_207_207 P49116 P49116-2 Nuclear receptor subfamily 2 group C member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6021.6021.3 11.35 11.35 1.119 3 1 1 0 697.0258 2009.0941 S207s TMT10 199 (R) EKPSNCAAsTEK (I) EKPS(0.0)NCAAS(0.99)T(0.0)EK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NR2C2 66269.1 2 5 993.1 191.1 HUMAN 1 12.6379 -22.0146 KPSSPSLSPLMGFGS-p Q8TEW8;S368-p KPSSPSLSPLMGFGS 0.668143294057803 0.777531520057242 -0.0646666666666667 0.035 3.27611327341035 1.51262476336794 -0.0646666666666667 0.035 0.470314829451062 0.705890803198167 -0.77595713175802 0.397901214420815 Q8TEW8 PARD3B Q8TEW8.S368.p_PARD3B Q8TEW8_S368s _1_1_368_368 Q8TEW8 Q8TEW8|Q8TEW8-2|Q8TEW8-3|Q8TEW8-6|Q8TEW8-5|A0A087X1S9|A0A087WYL6|A0A087WZG6|R4GN62 Partitioning defective 3 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26681.26681.4 15.61 15.61 2.607 5 1 1 0 682.8729 2648.5049 S368s TMT10 358 (R) LGGKPSSPSLsPLMGFGSNK (N) LGGKPS(0.0)S(0.0)PS(0.0)LS(0.99)PLMGFGS(0.0)NK K:TMT10,s:Phosphorylated S PARD3B 133176.7 4 36 65.4 692.2 HUMAN 1 -3.2761 1.5126 KPSSTPRSKGQESFK-p P06748;S222-p KPSSTPRSKGQESFK 0.560899556742354 0.0478140232315698 0.178333333333333 0.469 4.62467682313396 17.6627815087222 0.178333333333333 0.469 0.344772261578689 0.0171285992749325 1.03480610116566 3.39162613348942 P06748 NPM1 P06748.S222.p_NPM1 P06748_S222s _1_1_222_222 P06748 P06748|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.4146.4146.4 11.09 11.09 2.162 5 1 1 0 490.0234 1877.1059 S222s TMT10 213 (K) DSKPSSTPRsK (G) DS(0.0)KPS(0.0)S(0.0)T(0.0)PRS(0.99)K K:TMT10,s:Phosphorylated S NPM1 32745.6 1 17 78.1 640.75 HUMAN 1 4.6247 17.6628 KPSTSDDSDSNFEKI-p P11388-2;S1500-p KPSTSDDSDSNFEKI 0.0118555182322253 0.00126152492245864 1.52266666666667 1.06833333333333 46.0458065335619 47.4454574259119 1.52266666666667 1.06833333333333 2.48553193020794e-05 1.80075345791882e-05 13.2529340304367 14.0465060077243 P11388 TOP2A P11388.2.S1500.p_TOP2A P11388-2_S1500s _1_1_1500_1500 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7529.7529.3 12.26 9.19 2.67 5 1 1 0 827.4144 2400.261 S1500s TMT10 1492 (K) RKPSTSDDsDSNFEK (I) RKPS(0.0)T(0.0)S(0.0)DDS(0.99)DS(0.0)NFEK K:TMT10,s:Phosphorylated S TOP2A 178239.3 4 14 71.2 658.36 HUMAN 1 46.0458 47.4455 KPSYAFGSVGKEKFQ-p Q02790;S229-p KPSYAFGSVGKEKFQ 0.969272902686383 0.412999829060888 0.00666666666666667 -0.118 0.264477205823243 5.10866564937232 0.00666666666666667 -0.118 0.94091908899678 0.308413539168029 0.0776207849495593 -1.12370354544763 Q02790 FKBP4 Q02790.S229.p_FKBP4 Q02790_S229s _1_1_229_229 Q02790 Q02790 Peptidyl-prolyl cis-trans isomerase FKBP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21144.21144.4 22.7 22.7 2.328 5 1 1 0 702.3852 2726.5485 S229s TMT10 214 (K) GEHSIVYLKPSYAFGsVGK (E) GEHS(0.0)IVY(0.0)LKPS(0.0)Y(0.0)AFGS(0.99)VGK K:TMT10,s:Phosphorylated S FKBP4 52088.9 4 5 706.1 239.22 HUMAN 1 0.2645 -5.1087 KPSYDTETDPSEGLM-p Q9HB71;T185-p KPSYDTETDPSEGLM 0.68850718716697 0.293447383280672 0.0596666666666667 -0.103333333333333 3.04208193924174 7.02806667573018 0.0596666666666667 -0.103333333333333 0.496354319976188 0.198240932739405 0.728946729511316 -1.46551872906671 Q9HB71 CACYBP Q9HB71.T185.p_CACYBP Q9HB71_T185t _1_1_185_185 Q9HB71 Q9HB71|Q9HB71-3 Calcyclin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25226.25226.3 7.52 7.52 1.16 5 1 1 0 1007.508 2940.5479 T185t TMT10 177 (K) EKPSYDTEtDPSEGLMNVLK (K) EKPS(0.0)Y(0.0)DT(0.0)ET(0.99)DPS(0.0)EGLMNVLK K:TMT10,t:Phosphorylated T CACYBP 26323.6 4 3 4193.1 35.6 HUMAN 1 3.0421 -7.0281 KPTAPAPSAPPSPSA-p P55198;S378-p KPTAPAPSAPPSPSA 0.886027178849554 0.00509636762629699 -0.055 0.615 1.02962049026972 33.3721539712727 -0.055 0.615 0.788929055443933 0.000460028356628997 -0.281292000689048 7.5137343866073 P55198 MLLT6 P55198.S378.p_MLLT6 P55198_S378sS382s_2_2_378_382 P55198 P55198|A0A087WW39 Protein AF-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22256.22256.4 18.88 17.92 1.469 6 2 2 0 1021.2787 3922.1772 S378s S382s TMT10 369 (K) YSKPTAPAPsAPPsPSAPEPPKADLFEQK (V) Y(0.0)S(0.0)KPT(0.0)APAPS(0.99)APPS(0.99)PS(0.0)APEPPKADLFEQK K:TMT10,s:Phosphorylated S MLLT6 113557.5 2 13 1008.1 189 HUMAN 1 -1.0296 33.3722 KPTGNGIYINGRGHL-p Q96NY8;Y502-p KPTGNGIYINGRGHL 0.189469922667285 0.109333006519697 0.239 -0.209 14.1407789731996 12.6991660090804 0.239 -0.209 0.0385409222460486 0.0537134934371562 2.71880253419229 -2.45568669770566 Q96NY8 PVRL4 Q96NY8.Y502.p_PVRL4 Q96NY8_Y502y _1_1_502_502 Q96NY8 Q96NY8|Q96NY8-2 Nectin-4 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.12403.12403.3 11.58 11.58 11.579 2 1 1 0 633.6788 1819.059 Y502y TMT10 494 (R) AKPTGNGIyINGR (G) AKPT(0.0)GNGIY(0.99)INGR K:TMT10,y:Phosphorylated Y NECTIN4 55966.8 1 2 116.1 26.05 HUMAN 1 14.1408 -12.6992 KPTQSVSSPEATSGS-p Q9BZ95;S561-p KPTQSVSSPEATSGS 0.924244864824156 0.620677296535082 -0.0146666666666667 -0.0486666666666667 0.674972195700042 2.8174516685823 -0.0146666666666667 -0.0486666666666666 0.856057192331928 0.522702807968867 -0.190236180003113 -0.682991785746041 Q9BZ95 WHSC1L1 Q9BZ95.S561.p_WHSC1L1 Q9BZ95_S561s _1_1_561_561 Q9BZ95 Q9BZ95|Q9BZ95-5|Q9BZ95-2|Q9BZ95-4|Q9BZ95-3 Histone-lysine N-methyltransferase NSD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9539.9539.3 21.71 21.71 1.197 9 1 1 0 1025.5228 2994.5835 S561s TMT10 552 (R) NEKPTQSVSsPEATSGSTGSVEK (K) NEKPT(0.0)QS(0.0)VS(0.0)S(0.99)PEAT(0.0)S(0.0)GS(0.0)T(0.0)GS(0.0)VEK K:TMT10,s:Phosphorylated S NSD3 165432.8 8 4 1351.1 150.85 HUMAN 1 -0.675 -2.8175 KPTRRDASPESPSKK-p O95467;S230-p KPTRRDASPESPSKK 0.0504559037882092 0.250866356481305 0.447666666666667 0.131333333333333 28.6097408609637 7.91195481825874 0.447666666666667 0.131333333333333 0.0013772916480137 0.161735188180091 6.0200356919117 1.61937598882656 O95467 GNAS O95467.S230.p_GNAS O95467_S230s _1_1_230_230 O95467 O95467 Neuroendocrine secretory protein 55 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6083.6083.3 8.74 5.3 1.603 3 1 1 0 604.9946 1733.0048 S230s TMT10 228 (R) DAsPESPSKK (G) DAS(0.99)PES(0.0)PS(0.0)KK K:TMT10,s:Phosphorylated S GNAS 28256.4 3 2 4837.1 26.06 HUMAN 1 28.6097 7.912 KPVEPAASDLEPFTP-p Q14676;S1658-p KPVEPAASDLEPFTP 0.217558435482901 0.530612065551308 0.190666666666667 0.0606666666666667 12.7613236692658 3.70108835771269 0.190666666666667 0.0606666666666667 0.0529502034428883 0.426472629821982 2.46814636157445 0.859405258815878 Q14676 MDC1 Q14676.S1658.p_MDC1 Q14676_S1658s _1_1_1658_1658 Q14676 Q14676|Q14676-2|Q14676-3 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24470.24470.4 22.69 21.46 4.502 7 1 1 0 1066.0559 4181.2221 S1658s TMT10 1649 (K) TPKPVEPAAsDLEPFTPTDQSVTPEAIAQGGQSK (T) T(0.0)PKPVEPAAS(0.99)DLEPFT(0.0)PT(0.0)DQS(0.0)VT(0.0)PEAIAQGGQS(0.0)K K:TMT10,s:Phosphorylated S MDC1 227803.2 2 50 6.1 1662.62 HUMAN 1 12.7613 3.7011 KPVEVTESA______-p O15294;S1045-p KPVEVTESA______ 0.558156187420407 0.632675910253021 -0.0923333333333333 -0.0623333333333333 4.67803212018456 2.7015847295427 -0.0923333333333333 -0.0623333333333333 0.340562470776466 0.536835870579252 -1.04471106433817 -0.659033150834196 O15294 OGT O15294.S1045.p_OGT O15294_S1045s _1_1_1045_1045 O15294 O15294|O15294-3|O15294-2|O15294-4 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28078.28078.5 25.08 25.08 1.742 4 1 1 0 805.8118 3945.0646 S1045s TMT10 1019 (R) LYLQMWEHYAAGNKPDHMIKPVEVTEsA (-) LY(0.0)LQMWEHY(0.0)AAGNKPDHMIKPVEVT(0.0)ES(0.99)A K:TMT10,s:Phosphorylated S OGT 118177.7 3 2 3740.1 44.09 HUMAN 1 -4.678 -2.7016 KPVLEPLTPPLGSPR-p Q9H7P9;T445-p KPVLEPLTPPLGSPR 0.497489803830562 0.949921470850588 0.109333333333333 0.00666666666666669 5.58477822367468 0.319801311034492 0.109333333333333 0.0066666666666667 0.2763899056521 0.929008887801773 1.21022467983389 0.0933092093525533 Q9H7P9 PLEKHG2 Q9H7P9.T445.p_PLEKHG2 Q9H7P9_T445t _1_1_445_445 Q9H7P9 Q9H7P9|Q9H7P9-3|E7ESZ3|Q9H7P9-2 Pleckstrin homology domain-containing family G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18137.18137.5 14.94 14.94 7.395 3 1 1 0 496.6898 2399.4539 T445t TMT10 437 (K) SKPVLEPLtPPLGSPRPR (D) S(0.0)KPVLEPLT(0.99)PPLGS(0.0)PRPR K:TMT10,t:Phosphorylated T PLEKHG2 149335.7 4 3 886.1 206.23 HUMAN 1 5.5848 0.3198 KPVLNMRTPDTAKKT-p Q13112;T394-p KPVLNMRTPDTAKKT 0.487704096786122 0.00104745705872082 -0.128 -1.38866666666667 5.74666576087915 50.9578164662735 -0.128 -1.38866666666667 0.266276858102975 8.02081230199469e-06 -1.23929970338801 -16.3557869226058 Q13112 CHAF1B Q13112.T394.p_CHAF1B Q13112_T394t _1_1_394_394 Q13112 Q13112 Chromatin assembly factor 1 subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13251.13251.4 13.81 9.54 3.204 2 1 1 0 592.5833 2287.3411 T394t TMT10 386 (K) EKPVLNMRtPDTAK (K) EKPVLNMRT(0.99)PDT(0.0)AK K:TMT10,t:Phosphorylated T CHAF1B 61947.8 2 1 1182.1 168.89 HUMAN 1 -5.7467 -50.9578 KPVSVKISFEDEPRK-p Q9Y6M7-13;S1119-p KPVSVKISFEDEPRK 0.93643415136057 0.0320687122379841 0.0133333333333333 -0.286333333333333 0.555255810654206 20.1689965475324 0.0133333333333333 -0.286333333333333 0.879983276875459 0.00961834487906909 0.15826953306636 -3.91161327271415 Q9Y6M7 SLC4A7 Q9Y6M7.13.S1119.p_SLC4A7 Q9Y6M7-13_S1119s _1_1_1119_1119 Q9Y6M7-13 Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-5 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18611.18611.3 11.82 7.13 1.637 4 1 1 0 1010.5268 2949.5959 S1119s TMT10 1106 (R) SNMSPDKPVSVKIsFEDEPR (K) S(0.0)NMS(0.0)PDKPVS(0.0)VKIS(0.99)FEDEPR K:TMT10,s:Phosphorylated S SLC4A7 128884.6 1 19 207.1 445.25 HUMAN 1 0.5553 -20.169 KPWERSNSVEKPVSS-p Q9UI08-2;S333-p KPWERSNSVEKPVSS 0.730767130605638 0.515919181101942 -0.0786666666666667 0.0646666666666667 2.58586840290648 3.85871866505172 -0.0786666666666667 0.0646666666666667 0.551331948589144 0.411271043905601 -0.634964873911705 0.889878522706952 Q9UI08 EVL Q9UI08.2.S333.p_EVL Q9UI08-2_S333s_1_1_333_333 Q9UI08-2 Q9UI08-2|Q9UI08-5|Q9UI08-3|Q9UI08-4 Isoform 1 of Ena/VASP-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18100.18100.3 9.01 9.01 1.124 5 1 1 0 681.3715 1961.1432 N332n S333s TMT10 331 (R) SnsVEKPVSSILSR (T) S(0.0)N(1.0)S(0.99)VEKPVS(0.0)S(0.0)ILS(0.0)R K:TMT10,n:Deamidated,s:Phosphorylated S EVL 44905.3 2 4 2000.1 103.33 HUMAN 1 -2.5859 3.8587 KPYCNAHYPKQSFTM-p Q14847-2;Y57-p KPYCNAHYPKQSFTM 0.321360955335002 0.408269333223645 -0.197 -0.147 9.2274497196544 5.178345396717 -0.197 -0.147 0.119468944854003 0.303504727594738 -1.84774288450876 -1.13640595599786 Q14847 LASP1 Q14847.2.Y57.p_LASP1 Q14847-2_Y57y _1_1_57_57 Q14847-2 Q14847-2|O76041-2|F6S2S5 Isoform 2 of LIM and SH3 domain protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8412.8454.3 16.88 12.6 16.88 2 1 1 0 682.3594 1965.0984 Y57y TMT10 50 (K) KPYCNAHyPK (Q) KPY(0.0)CNAHY(0.99)PK K:TMT10,C:Carbamidomethylation,y:Phosphorylated Y LASP1 36812.2 4 1 212.1 16.88 HUMAN 1 -9.2274 -5.1783 KQADGAASAPTEEEE-p A0A1B0GV68;S445-p KQADGAASAPTEEEE 0.306735184126758 0.0344306282020699 0.161 0.334666666666667 9.60412315140469 19.7128485139752 0.161 0.334666666666667 0.10954377039403 0.010683539218221 1.91300744425262 3.81409000863498 A0A1B0GV68 NotFound A0A1B0GV68.S445.p_NotFound A0A1B0GV68_S445s _1_1_445_445 A0A1B0GV68 Q9Y4F1-2|C9JME2|A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14171.14171.3 14.97 13.68 2.495 2 1 1 0 800.0533 2318.1764 S445s TMT10 439 (K) QADGAAsAPTEEEEEVVK (D) QADGAAS(0.99)APT(0.0)EEEEEVVK K:TMT10,s:Phosphorylated S FARP1 88555.5 2 10 147.1 514.5 HUMAN 1 9.6041 19.7128 KQADRRQSMAFSILN-p Q14980;S2047-p KQADRRQSMAFSILN 0.417282602990268 0.0464472537409031 -0.190666666666667 0.502333333333333 7.00720498166482 17.8328509129172 -0.190666666666667 0.502333333333333 0.199195490242358 0.0164708081537407 -1.46227434740826 3.42574442798294 Q14980 NUMA1 Q14980.S2047.p_NUMA1 Q14980_S2047s _1_1_2047_2047 Q14980 Q14980 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21341.21341.3 12.04 9.71 2.778 3 1 1 0 677.7018 1951.1199 S2047s TMT10 2045 (R) RQsMAFSILNTPK (K) RQS(0.99)MAFS(0.0)ILNT(0.0)PK K:TMT10,s:Phosphorylated S NUMA1 239339.3 1 34 31.1 900.97 HUMAN 1 -7.0072 17.8329 KQAQTQTSPEHLVLQ-p F5H2X7;S380-p KQAQTQTSPEHLVLQ 0.838274783466982 0.177928610284955 0.0293333333333333 0.158 1.48302328548996 9.86258292624822 0.0293333333333333 0.158 0.710718583751693 0.10321473630871 0.391005624607022 1.95706682221036 F5H2X7 CIZ1 F5H2X7.S380.p_CIZ1 F5H2X7_S380s _1_1_380_380 F5H2X7 F5H2X7|Q9ULV3|Q5SYW2|Q9ULV3-2|Q9ULV3-4|Q9BTG3|Q9ULV3-3|Q9ULV3-5 Cip1-interacting zinc finger protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14087.14087.2 13 13 1.16 3 1 1 0 1187.6317 2294.2869 S380s TMT10 374 (K) QAQTQTsPEHLVLQQK (Q) QAQT(0.0)QT(0.0)S(0.99)PEHLVLQQK K:TMT10,s:Phosphorylated S CIZ1 107380.6 4 7 497.1 292.98 HUMAN 1 1.483 9.8626 KQASPLISPLLNDQA-p Q9Y4F1-2;S514-p KQASPLISPLLNDQA 0.459669547884547 0.424954079038645 0.127666666666667 -0.0753333333333333 6.2243119594018 4.94638457964612 0.127666666666667 -0.0753333333333333 0.238544168438311 0.320155923881962 1.32442616904695 -1.09400446304121 Q9Y4F1 FARP1 Q9Y4F1.2.S514.p_FARP1 Q9Y4F1-2_S514s _1_1_514_514 Q9Y4F1-2 Q9Y4F1-2|C9JME2 Isoform 2 of FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24333.24333.3 10.82 10.82 1.905 2 1 1 0 730.3707 2109.1324 S514s TMT10 508 (K) QASPLIsPLLNDQACPR (T) QAS(0.0)PLIS(0.99)PLLNDQACPR C:Carbamidomethylation,s:Phosphorylated S FARP1 122909.6 1 34 147.2 514.5 HUMAN 1 6.2243 -4.9464 KQDFKNKSHENCNQN-p Q13188-2;S434-p KQDFKNKSHENCNQN 0.913215313054764 0.230248275437608 0.017 0.173 0.769263277176788 8.40180487555554 0.017 0.173 0.83767136988096 0.144483918819377 0.214955121511027 1.70423248259275 Q13188 STK3 Q13188.2.S434.p_STK3 Q13188-2_S434s _1_1_434_434 Q13188-2 Q13188-2|A0A087WZ06 Isoform 2 of Serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10489.10489.5 15.28 15.28 15.278 2 1 1 0 620.095 3016.4795 S434s TMT10 432 (K) NKsHENCNQNMHEPFPMSK (N) NKS(0.99)HENCNQNMHEPFPMS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S STK3 59803 5 9 1088.1 179.29 HUMAN 1 0.7693 8.4018 KQDSRYYSDREKHRK-p O14646;S1599-p KQDSRYYSDREKHRK 0.555118236769036 0.0592442365528557 0.124333333333333 -0.253 4.72081311727896 16.3519280563943 0.124333333333333 -0.253 0.337224165221004 0.0231636606772683 1.0526380086507 -3.13378421531153 O14646 CHD1 O14646.S1599.p_CHD1 O14646_S1599s _1_1_1599_1599 O14646 O14646|O14646-2 Chromodomain-helicase-DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6262.6262.3 8.82 8.82 6.599 3 1 1 0 500.2497 1418.768 S1599s TMT10 1597 (R) YYsDREK (H) Y(0.0)Y(0.0)S(0.99)DREK K:TMT10,s:Phosphorylated S CHD1 197825.1 1 8 848.1 212.75 HUMAN 1 4.7208 -16.3519 KQEAESWSPDACLGV-p Q9UJ41;S617-p KQEAESWSPDACLGV 0.963950764010534 0.20105044349916 0.00699999999999999 -0.130333333333333 0.307793407728024 9.16482181096519 0.00699999999999999 -0.130333333333333 0.931581079150493 0.121204241729944 0.0899256395676895 -1.83622435931061 Q9UJ41 RABGEF1 Q9UJ41.S617.p_RABGEF1 Q9UJ41_S617s _1_1_617_617 Q9UJ41 Q9UJ41|Q9UJ41-3|Q9UJ41-4|E9PFK9|Q9UJ41-2|Q3HKR1|A0A0A0MSJ3 Rab5 GDP/GTP exchange factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18902.18902.3 18.05 18.05 4.464 2 1 1 0 858.1068 2492.3422 S617s TMT10 610 (R) KQEAESWsPDACLGVK (Q) KQEAES(0.0)WS(0.99)PDACLGVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RABGEF1 80625 4 5 1593.1 129.22 HUMAN 1 0.3078 -9.1648 KQEKTPKTPKGPSSV-p P06748;T237-p KQEKTPKTPKGPSSV 0.113798805771488 0.276555179958022 -0.601666666666667 -0.176 19.6786175046668 7.35560887038427 -0.601666666666667 -0.176 0.0107680794076383 0.183839619708516 -3.81031517776635 -1.52268590096749 P06748 NPM1 P06748.T237.p_NPM1 P06748_T237t _1_1_237_237 P06748 P06748|P06748-2|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13275.13275.3 11.17 6.69 7.056 3 1 1 0 675.713 1945.1573 T237t TMT10 237 (K) tPKGPSSVEDIK (A) T(0.99)PKGPS(0.0)S(0.0)VEDIK K:TMT10,t:Phosphorylated T NPM1 32745.6 2 20 78.1 640.75 HUMAN 1 -19.6786 -7.3556 KQENGDLSPFSGTSL-p P19174-2;S1222-p KQENGDLSPFSGTSL 0.155823496231451 0.0614205971088859 -0.317666666666667 -0.333666666666667 16.2277047373471 16.1332876259552 -0.317666666666667 -0.333666666666667 0.0238357886691726 0.0243596608451323 -3.11203495006824 -3.09161778464452 P19174 PLCG1 P19174.2.S1222.p_PLCG1 P19174-2_S1222s _1_1_1222_1222 P19174-2 P19174-2 Isoform 2 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28026.28026.4 16.66 16.66 5.651 4 1 1 0 733.3833 2850.5402 S1222s TMT10 1209 (K) IDIFPAKQENGDLsPFSGTSLR (E) IDIFPAKQENGDLS(0.99)PFS(0.0)GT(0.0)S(0.0)LR K:TMT10,s:Phosphorylated S PLCG1 149969.8 4 5 1779.1 115.42 HUMAN 1 -16.2277 -16.1333 KQERETFSSAEGTVD-p P46100;S889-p KQERETFSSAEGTVD 0.84071905311603 0.34088647418924 0.0416666666666667 0.125 1.45509428443322 6.1913561709003 0.0416666666666667 0.125 0.7153038648079 0.240361210711569 0.384436167735022 1.31825832867799 P46100 ATRX P46100.S889.p_ATRX P46100_S889s _1_1_889_889 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23580.23580.3 14.79 11.6 1.136 6 1 1 0 923.4545 2688.3802 S889s TMT10 886 (R) ETFsSAEGTVDKDTTIMELR (D) ET(0.0)FS(0.99)S(0.0)AEGT(0.0)VDKDT(0.0)T(0.0)IMELR K:TMT10,s:Phosphorylated S ATRX 285034.2 6 25 18.1 1035.36 HUMAN 1 1.4551 6.1914 KQERISYTPPESPVP-p P41212;T18-p KQERISYTPPESPVP 0.326712709573282 0.43910939708751 0.154 0.099 9.09244008722211 4.76163017513307 0.154 0.099 0.123241220682934 0.334069619549577 1.82436602854049 1.05998320393601 P41212 ETV6 P41212.T18.p_ETV6 P41212_T18tS22s_2_2_18_22 P41212 P41212 Transcription factor ETV6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.26470.26470.3 21.79 21.79 2.147 9 2 2 0 1023.1661 2907.5454 T18t S22s TMT10 15 (R) ISYtPPEsPVPSYASSTPLHVPVPR (A) IS(0.0)Y(0.0)T(0.99)PPES(0.99)PVPS(0.0)Y(0.0)AS(0.0)S(0.0)T(0.0)PLHVPVPR t:Phosphorylated T,s:Phosphorylated S ETV6 53284.3 2 7 2218.1 92.96 HUMAN 1 9.0924 4.7616 KQFLRQNTGDDQTS_-p C9JYS5;T199-p KQFLRQNTGDDQTS_ 0.798947574257861 0.586282588667998 -0.0413333333333333 -0.068 1.87860525336582 3.13470197859237 -0.0413333333333333 -0.068 0.648842777429267 0.485880871893733 -0.481747255552714 -0.747533823306639 C9JYS5 NotFound C9JYS5.T199.p_NotFound C9JYS5_T199t _1_1_199_199 C9JYS5 Q9NYZ1|C9JYS5|J3QL63|J3QL47 Golgi apparatus membrane protein TVP23 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10428.10428.3 10.94 10.94 2.914 3 1 1 0 606.9451 1738.8558 T199t TMT10 193 (K) QFLRQNtGDDQTS (-) QFLRQNT(0.99)GDDQT(0.0)S(0.0) t:Phosphorylated T TVP23C 23865.1 2 2 4158.1 36.48 HUMAN 1 -1.8786 -3.1347 KQFQGTDSGEEPLLP-p P46013;S793-p KQFQGTDSGEEPLLP 0.919774718344234 0.00653029995169545 -0.015 -0.514666666666667 0.709465070152608 31.4219429536634 -0.015 -0.514666666666667 0.849285076862401 0.000720784941109055 -0.199324160996948 -6.86512682711195 P46013 MKI67 P46013.S793.p_MKI67 P46013_S793s _1_1_793_793 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32667.32667.4 25.13 24.47 1.762 6 1 1 0 975.4706 3818.8914 S793s TMT10 787 (K) QFQGTDsGEEPLLPTSESFGGNVFFSAQNAAK (Q) QFQGT(0.0)DS(0.99)GEEPLLPT(0.0)S(0.0)ES(0.0)FGGNVFFS(0.0)AQNAAK K:TMT10,s:Phosphorylated S MKI67 360912.4 2 17 5.1 1918.46 HUMAN 1 -0.7095 -31.4219 KQGEVIVSIEEKPKE-p P49321-3;S271-p KQGEVIVSIEEKPKE 0.372999967794591 0.0287408753328605 -0.196666666666667 0.307333333333333 7.94471676985287 20.871796048117 -0.196666666666667 0.307333333333333 0.160519693945013 0.00818126377613575 -1.62556895128843 4.06457884647474 P49321 NASP P49321.3.S271.p_NASP P49321-3_S271s _1_1_271_271 P49321-3 P49321-3|P49321-4 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17818.17818.3 9.93 9.93 99 1 1 1 0 741.7581 2143.2941 S271s TMT10 265 (K) QGEVIVsIEEKPK (E) QGEVIVS(1.0)IEEKPK K:TMT10,s:Phosphorylated S NASP 86552 1 9 87.1 626.46 HUMAN 1 -7.9447 20.8718 KQGPSPVSPNALDRT-p Q5VWQ8;S995-p KQGPSPVSPNALDRT 0.991004899675327 0.413100567516982 -0.00233333333333333 -0.122 0.0811345626359551 5.10712242390582 -0.00233333333333331 -0.122 0.981491502033518 0.308523150553904 -0.0242904936608817 -1.12342188996747 Q5VWQ8 DAB2IP Q5VWQ8.S995.p_DAB2IP Q5VWQ8_S995s _1_1_995_995 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13116.13116.2 13.31 13.31 2.698 2 1 1 0 823.911 1566.8437 S995s TMT10 989 (K) QGPSPVsPNALDR (T) QGPS(0.0)PVS(0.99)PNALDR s:Phosphorylated S DAB2IP 132592.9 2 21 281.1 388.28 HUMAN 1 -0.0811 -5.1071 KQGTYGGYFRDQKDG-p B5ME19;Y885-p KQGTYGGYFRDQKDG 0.0626849711829956 0.0888583162459975 -0.459666666666667 -0.237666666666667 26.1492285333311 13.9127709354165 -0.459666666666667 -0.237666666666667 0.00242704118853787 0.0406184088245885 -5.34085431523149 -2.67532426182669 B5ME19 EIF3CL B5ME19.Y885.p_EIF3CL B5ME19_Y885y _1_1_885_885 B5ME19 B5ME19|Q99613|Q99613-2 Eukaryotic translation initiation factor 3 subunit C-like protein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11573.11573.3 9.61 4.79 9.608 3 1 1 0 653.3242 1877.991 Y885y TMT10 879 (K) QGTYGGyFRDQK (D) QGT(0.0)Y(0.0)GGY(0.99)FRDQK K:TMT10,y:Phosphorylated Y EIF3CL 106155.7 1 2 58.1 38.96 HUMAN 1 -26.1492 -13.9128 KQHGDVVSAIRAGGD-p O14745;S217-p KQHGDVVSAIRAGGD 0.104350694460848 0.0793493508242918 0.307 0.198666666666667 20.6915308820324 14.6025184427179 0.307 0.198666666666667 0.00852799450404064 0.0346535838514912 4.0289572715778 2.80246068616882 O14745 SLC9A3R1 O14745.S217.p_SLC9A3R1 O14745_S217s _1_1_217_217 O14745 O14745|O14745-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8652.8652.3 8.25 8.25 99 1 1 1 0 464.2391 1310.7378 S217s TMT10 211 (K) QHGDVVsAIR (A) QHGDVVS(1.0)AIR s:Phosphorylated S SLC9A3R1 39153 1 7 534.1 279.04 HUMAN 1 20.6915 14.6025 KQIEKRDSVLTSKNQ-p O75937;S35-p KQIEKRDSVLTSKNQ 0.0476372614756949 0.443523015881526 -0.731 0.0803333333333334 29.3568726201006 4.70159800463437 -0.731 0.0803333333333334 0.00115961209900472 0.338719499955965 -6.23881217458113 1.04887786322994 O75937 DNAJC8 O75937.S35.p_DNAJC8 O75937_S35s _1_1_35_35 O75937 O75937 DnaJ homolog subfamily C member 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8084.8084.2 8.75 8.75 8.753 3 1 1 0 722.4021 1363.8309 S35s TMT10 33 (K) RDsVLTSK (N) RDS(0.99)VLT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S DNAJC8 29841.1 2 2 2647.1 75.23 HUMAN 1 -29.3569 4.7016 KQISFNGSEGRRSRS-p O14646;S1085-p KQISFNGSEGRRSRS 0.430459384492558 0.46114855175873 0.218333333333333 -0.0786666666666666 6.74093313914297 4.48270080009701 0.218333333333333 -0.0786666666666666 0.21179060262317 0.3562295317219 1.4155842893779 -1.00815865794792 O14646 CHD1 O14646.S1085.p_CHD1 O14646_S1085s _1_1_1085_1085 O14646 O14646|O14646-2 Chromodomain-helicase-DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8279.8279.2 9.3 4.41 3.297 2 1 1 0 780.381 1479.7866 S1085s TMT10 1079 (K) QISFNGsEGRR (S) QIS(0.0)FNGS(0.99)EGRR s:Phosphorylated S CHD1 197825.1 1 4 848.1 212.75 HUMAN 1 6.7409 -4.4827 KQIVDRVSYLLQEIY-p O60291-2;S247-p KQIVDRVSYLLQEIY 0.0576036189507777 0.0676572547036042 -0.606333333333333 -0.365 27.0935734621354 15.5619218495012 -0.606333333333333 -0.365 0.00195273204745326 0.02778483455055 -5.59431511288004 -2.98248322136153 O60291 MGRN1 O60291.2.S247.p_MGRN1 O60291-2_S247s _1_1_247_247 O60291-2 O60291-2|O60291-3|O60291-4|B4DR12 Isoform 2 of E3 ubiquitin-protein ligase MGRN1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36228.36228.4 16.37 16.37 5.862 3 1 1 0 705.3839 2738.5493 S247s TMT10 241 (K) QIVDRVsYLLQEIYGIENK (N) QIVDRVS(0.99)Y(0.0)LLQEIY(0.0)GIENK K:TMT10,s:Phosphorylated S MGRN1 63873.2 1 3 1708.1 120.05 HUMAN 1 -27.0936 -15.5619 KQKFFAGSQEPMATF-p Q9NUW8;S563-p KQKFFAGSQEPMATF 0.369489108717469 0.649185296967532 -0.154 -0.045 8.02001351193074 2.55978072870846 -0.154 -0.045 0.157760636138438 0.554653716207226 -1.63863225456128 -0.629405966480006 Q9NUW8 TDP1 Q9NUW8.S563.p_TDP1 Q9NUW8_S563s _1_1_563_563 Q9NUW8 Q9NUW8|Q9NUW8-2 Tyrosyl-DNA phosphodiesterase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36817.36817.4 20.2 20.2 1.344 5 1 1 0 857.4251 3346.711 S563s TMT10 559 (K) FFAGsQEPMATFPVPYDLPPELYGSK (D) FFAGS(0.99)QEPMAT(0.0)FPVPY(0.0)DLPPELY(0.0)GS(0.0)K K:TMT10,s:Phosphorylated S TDP1 68818.5 5 8 1900.1 108.34 HUMAN 1 -8.02 -2.5598 KQKNIKHSGNITFDE-p P30050;S101-p KQKNIKHSGNITFDE 0.961261717654481 0.478983365687233 0.014 -0.087 0.329097862937419 4.26465373529795 0.014 -0.087 0.927022368856536 0.374571410571759 0.0959384496706863 -0.96722039806854 P30050 RPL12 P30050.S101.p_RPL12 P30050_S101s _1_1_101_101 P30050 P30050|P30050-2 60S ribosomal protein L12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23000.23000.4 13.63 13.63 2.597 2 1 1 0 645.5998 2499.4084 S101s TMT10 97 (K) NIKHsGNITFDEIVNIAR (Q) NIKHS(0.99)GNIT(0.0)FDEIVNIAR K:TMT10,s:Phosphorylated S RPL12 17989.4 1 3 1867.1 110.2 HUMAN 1 0.3291 -4.2647 KQKQISYSPGVCSIE-p Q5VT25-2;S674-p KQKQISYSPGVCSIE 0.271389173621348 0.00979173603864698 -0.214333333333333 -0.432333333333333 10.734267847432 28.2770213661314 -0.214333333333333 -0.432333333333333 0.0844448590734058 0.00148695512942789 -2.10961774726539 -5.91588124453577 Q5VT25 CDC42BPA Q5VT25.2.S674.p_CDC42BPA Q5VT25-2_S674s _1_1_674_674 Q5VT25-2 Q5VT25-6|Q5VT25-2|Q5VT25-5|A0A0A0MRJ0|Q5VT25-4 Isoform 2 of Serine/threonine-protein kinase MRCK alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17340.17340.4 18.85 18.85 1.417 5 1 1 0 686.3454 2662.3911 S674s TMT10 670 (K) QISYsPGVCSIEHQQEITK (L) QIS(0.0)Y(0.0)S(0.99)PGVCS(0.0)IEHQQEIT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CDC42BPA 201918 2 2 917.1 200.65 HUMAN 1 -10.7343 -28.277 KQKRKNESSDEISDA-p Q3L8U1;S611-p KQKRKNESSDEISDA 0.17776892686696 0.148698364006549 0.332 -0.247 14.8648866313202 10.8960284408309 0.332 -0.247 0.0326220565978446 0.0813574177699487 2.85314875174011 -2.13695123601687 Q3L8U1 CHD9 Q3L8U1.S611.p_CHD9 Q3L8U1_S611sS612sS616s_3_3_611_616 Q3L8U1 Q3L8U1|Q3L8U1-3|Q3L8U1-2 Chromodomain-helicase-DNA-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17110.17110.3 11.02 11.02 11.019 4 3 3 0 1072.1471 2974.5395 S611s S612s S616s TMT10 608 (R) KNEssDEIsDAEQMPQHTLK (D) KNES(0.99)S(0.99)DEIS(0.99)DAEQMPQHT(0.0)LK K:TMT10,s:Phosphorylated S CHD9 328184.1 2 11 1062.1 182 HUMAN 1 14.8649 -10.896 KQKSGPISPGIHSCD-p Q9BUB4;S227-p KQKSGPISPGIHSCD 0.120014369208718 0.105519606084473 -0.369 -0.171333333333333 19.1591466143379 12.9033168009489 -0.369 -0.171333333333333 0.0121362730396455 0.0512469850183445 -3.70077269936053 -2.49230435214476 Q9BUB4 ADAT1 Q9BUB4.S227.p_ADAT1 Q9BUB4_S227s _1_1_227_227 Q9BUB4 Q9BUB4 tRNA-specific adenosine deaminase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23502.23502.3 19.66 19.66 2.547 6 1 1 0 892.7812 2596.3602 S227s TMT10 223 (K) SGPIsPGIHSCDLTVEGLATVTR (I) S(0.0)GPIS(0.99)PGIHS(0.0)CDLT(0.0)VEGLAT(0.0)VT(0.0)R C:Carbamidomethylation,s:Phosphorylated S ADAT1 56190.2 1 2 2969.1 64.46 HUMAN 1 -19.1591 -12.9033 KQKTDVHYRSLGGEG-p O75923-13;Y1897-p KQKTDVHYRSLGGEG 0.29821012666005 0.861220645327817 -0.229 -0.0193333333333333 9.88185450690907 0.915128260108513 -0.229 -0.0193333333333333 0.102757741243492 0.810004019493473 -1.96119167350706 -0.252427037623803 O75923 DYSF O75923.13.Y1897.p_DYSF O75923-13_Y1897y _1_1_1897_1897 O75923-13 O75923-13|O75923-7|O75923-8|O75923-2|O75923-10|O75923-4|O75923-11|O75923-5|O75923-12|O75923-6|O75923-14 Isoform 13 of Dysferlin GG20160819_MSz_CCLE_T4D7_pY_Injection_02.4824.4824.3 14.7 5.75 10.69 2 1 1 0 528.9484 1504.8636 Y1897y TMT10 1891 (K) QKTDVHyR (S) QKT(0.0)DVHY(0.99)R K:TMT10,y:Phosphorylated Y DYSF 243519.2 2 1 244.1 14.7 HUMAN 1 -9.8819 -0.9151 KQKVEALSPGDRQQI-p Q5JRX3-2;S530-p KQKVEALSPGDRQQI 0.332256356782789 0.0913005956786205 0.155 0.193 8.93547001002428 13.7482174656066 0.155 0.193 0.127777091684935 0.0421869621632079 1.79719230246145 2.64525371454168 Q5JRX3 PITRM1 Q5JRX3.2.S530.p_PITRM1 Q5JRX3-2_S530s _1_1_530_530 Q5JRX3-2 Q5JRX3-2|Q5JRX3-3|A0A0A0MRX9 Isoform 2 of Presequence protease, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13396.13396.4 11.48 11.48 9.25 2 1 1 0 689.882 2676.5288 S530s TMT10 524 (K) QKVEALsPGDRQQIYEK (G) QKVEALS(0.99)PGDRQQIY(0.0)EK K:TMT10,s:Phosphorylated S PITRM1 118536.6 2 1 6474.1 11.48 HUMAN 1 8.9355 13.7482 KQKYLSFTPPEKDGF-p Q13177;T143-p KQKYLSFTPPEKDGF 0.131009621387088 0.0156734106482018 0.781666666666667 -1.40233333333333 18.2533872652206 24.9516373267691 0.781666666666667 -1.40233333333333 0.014950691270957 0.00319768932660636 3.51372868525203 -5.02528204288924 Q13177 PAK2 Q13177.T143.p_PAK2 Q13177_T143t _1_1_143_143 Q13177 Q13177 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26934.26934.4 14.07 14.07 1.156 5 1 1 0 776.9155 3024.6649 T143t TMT10 139 (K) YLSFtPPEKDGFPSGTPALNAK (G) Y(0.0)LS(0.0)FT(0.99)PPEKDGFPS(0.0)GT(0.0)PALNAK K:TMT10,t:Phosphorylated T PAK2 58326.8 4 24 272.1 393.22 HUMAN 1 18.2534 -24.9516 KQLARVPSPYVRTPV-p Q8WXX7;S941-p KQLARVPSPYVRTPV 0.557130772056018 0.0584025953292132 0.0906666666666667 0.332 4.68965500421494 16.4345529886921 0.0906666666666667 0.332 0.339652252887513 0.022727135494504 1.04686599078513 3.14977912110793 Q8WXX7 AUTS2 Q8WXX7.S941.p_AUTS2 Q8WXX7_S941s _1_1_941_941 Q8WXX7 Q8WXX7|Q8WXX7-2|A0A087WVB5|Q8WXX7-5 Autism susceptibility gene 2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12176.12509.2 7.83 3.76 4.221 2 1 1 0 563.7965 1046.6196 S941s TMT10 939 (R) VPsPYVR (T) VPS(0.99)PY(0.0)VR s:Phosphorylated S AUTS2 139379 3 6 684.1 243.98 HUMAN 1 4.6897 16.4346 KQLEESVSEKEQQLL-p O95239;S953-p KQLEESVSEKEQQLL 0.772583270547412 0.849717799306791 0.0556666666666667 0.03 2.14296781813465 0.993377908783905 0.0556666666666667 0.0300000000000001 0.610524670895718 0.795540344612022 0.540235557623526 0.272189734451346 O95239 KIF4A O95239.S953.p_KIF4A O95239_S953s _1_1_953_953 O95239 O95239|O95239-2 Chromosome-associated kinesin KIF4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30454.30454.4 13.68 14.23 1.229 4 1 1 0 714.8953 2776.5911 S953s TMT10 947 (K) QLEESVsEKEQQLLSTLK (C) QLEES(0.0)VS(0.99)EKEQQLLS(0.0)T(0.0)LK K:TMT10,s:Phosphorylated S KIF4A 141476.1 1 9 516.1 285.41 HUMAN 1 2.143 0.9934 KQLEMENSPLLSPRS-p Q9HCM4;S517-p KQLEMENSPLLSPRS 0.481005429235313 0.226627525607591 0.101666666666667 0.124 5.85011895930055 8.49013415416611 0.101666666666667 0.124 0.260008834215289 0.141575004656688 1.25781713839167 1.71951761012599 Q9HCM4 EPB41L5 Q9HCM4.S517.p_EPB41L5 Q9HCM4_S517s _1_1_517_517 Q9HCM4 Q9HCM4|Q9HCM4-3|Q9HCM4-4 Band 4.1-like protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19536.19536.3 10.86 10.86 3.887 2 1 1 0 608.3058 1742.9308 S517s TMT10 511 (K) QLEMENsPLLSPR (S) QLEMENS(0.99)PLLS(0.0)PR s:Phosphorylated S EPB41L5 82425.3 2 4 3030.1 62.71 HUMAN 1 5.8501 8.4901 KQLLMLQSLE_____-p M0QYZ2;S156-p KQLLMLQSLE_____ 0.471185273103468 0.030099587285394 0.157333333333333 0.390666666666667 6.03145239885406 20.5861306361575 0.157333333333333 0.390666666666667 0.249376060610977 0.00873749492262087 1.29016465079059 4.00199905692851 M0QYZ2 AP2S1 M0QYZ2.S156.p_AP2S1 M0QYZ2_S156s _1_1_156_156 M0QYZ2 M0QYZ2|X6R390|M0R0N4|P53680 AP complex subunit sigma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.32156.32156.2 8.96 8.96 99 1 1 1 0 692.3621 1303.7493 S156s TMT10 150 (K) QLLMLQsLE (-) QLLMLQS(1.0)LE s:Phosphorylated S AP2S1 19156.9 1 1 6870.1 8.96 HUMAN 1 6.0315 20.5861 KQLQRELSQVLTQRQ-p P47756;S263-p KQLQRELSQVLTQRQ 0.318436709095685 0.566554319231691 0.162666666666667 -0.0773333333333334 9.30045629823633 3.32829553095343 0.162666666666667 -0.0773333333333334 0.117477411898945 0.464697618616563 1.86038667082525 -0.786221777891333 P47756 CAPZB P47756.S263.p_CAPZB P47756_S263s _1_1_263_263 P47756 P47756 F-actin-capping protein subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18517.18517.2 9.99 9.99 3.721 2 1 1 0 691.8665 1302.7579 S263s TMT10 261 (R) ELsQVLTQR (Q) ELS(0.99)QVLT(0.0)QR s:Phosphorylated S CAPZB 31635.2 1 3 4212.1 35.35 HUMAN 1 9.3005 -3.3283 KQLQRQLSSSSSYSG-p P33527-9;S925-p KQLQRQLSSSSSYSG 0.398787390475283 0.693465860499104 -0.129666666666667 -0.0596666666666667 7.36804143706017 2.182364608775 -0.129666666666667 -0.0596666666666667 0.183314093815764 0.605011373736036 -1.52529547133069 -0.548753760225543 P33527 ABCC1 P33527.9.S925.p_ABCC1 P33527-9_S925s _1_1_925_925 P33527-9 P33527-9|P33527-3|P33527-2|P33527-4|P33527-5|P33527-7|P33527-6|P33527-8|A0A0A0MS99 Isoform 9 of Multidrug resistance-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10321.10321.2 15.23 10.41 1.136 8 1 1 0 891.9092 1702.8445 S925s TMT10 923 (R) QLsSSSSYSGDISR (H) QLS(0.99)S(0.0)S(0.0)S(0.0)S(0.0)Y(0.0)S(0.0)GDIS(0.0)R s:Phosphorylated S ABCC1 174063.4 2 2 3098.1 60.69 HUMAN 1 -7.368 -2.1824 KQLVAGNSPKKQASR-p Q96EU6;S73-p KQLVAGNSPKKQASR 0.148266672319898 0.00117578608133265 -0.305666666666667 -1.39066666666667 16.8156887958549 48.5556252259528 -0.305666666666667 -1.39066666666667 0.0208176220924567 1.39456087718925e-05 -3.22642073253566 -14.740290953407 Q96EU6 RRP36 Q96EU6.S73.p_RRP36 Q96EU6_S73s _1_1_73_73 Q96EU6 Q96EU6|Q96EU6-2 Ribosomal RNA processing protein 36 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9593.9593.2 14.64 14.64 99 1 1 1 0 905.0371 1729.0939 S73s TMT10 67 (K) QLVAGNsPKK (Q) QLVAGNS(1.0)PKK K:TMT10,s:Phosphorylated S RRP36 29879.6 11 1 4677.1 28.1 HUMAN 1 -16.8157 -48.5556 KQLVEKKSPDKTESS-p O60281;S2049-p KQLVEKKSPDKTESS 0.722162465540101 0.00666530425695377 0.0813333333333333 -0.794333333333333 2.67477364750848 31.2635694907176 0.0813333333333334 -0.794333333333333 0.540160266961164 0.000747554828436074 0.653543969457784 -6.8145667250539 O60281 ZNF292 O60281.S2049.p_ZNF292 O60281_S2049s _1_1_2049_2049 O60281 O60281|J3KNV1|O60281-2 Zinc finger protein 292 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19707.19707.5 17.91 17.91 1.206 11 1 1 0 1050.172 5166.8541 S2049s TMT10 2043 (K) QLVEKKsPDKTESSLQVITVTSEQCNTNALTNTQTK (G) QLVEKKS(0.99)PDKT(0.0)ES(0.0)S(0.0)LQVIT(0.0)VT(0.0)S(0.0)EQCNT(0.0)NALT(0.0)NT(0.0)QT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF292 309716.9 1 6 1936.1 106.19 HUMAN 1 2.6748 -31.2636 KQMTRRFSADEQFFS-p P46019;S1015-p KQMTRRFSADEQFFS 0.619282776629408 0.0535421916330441 0.116 0.366666666666667 3.86685137857992 16.9493338238526 0.116 0.366666666666667 0.410501607511088 0.0201867599014807 0.891591037016308 3.25019492096077 P46019 PHKA2 P46019.S1015.p_PHKA2 P46019_S1015s _1_1_1015_1015 P46019 P46019 Phosphorylase b kinase regulatory subunit alpha, liver isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18806.18806.4 16.34 16.34 5.656 7 1 1 0 743.1104 2889.4532 S1015s TMT10 1013 (R) RFsADEQFFSVGQAASSSAHSSK (S) RFS(0.99)ADEQFFS(0.0)VGQAAS(0.0)S(0.0)S(0.0)AHS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S PHKA2 139489.6 1 4 2510.1 80.53 HUMAN 1 3.8669 16.9493 KQNKNRISWVGEAVK-p P26358;S732-p KQNKNRISWVGEAVK 0.163265534069753 0.0148233079205259 -0.318666666666667 -0.415333333333333 15.7705356722739 25.3209238575777 -0.318666666666667 -0.412145497893579 0.0264817348453686 0.00293702480376311 -3.02425367650437 -5.11902247589888 P26358 DNMT1 P26358.S732.p_DNMT1 P26358_S732s _1_1_732_732 P26358 P26358-2|P26358-3 DNA (cytosine-5)-methyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18197.18197.3 10.18 10.18 99 1 1 1 0 599.6665 1717.0161 S732s TMT10 729 (K) NRIsWVGEAVK (T) NRIS(1.0)WVGEAVK K:TMT10,s:Phosphorylated S DNMT1 185501.2 2 10 431.1 316.29 HUMAN 1 -15.7705 -25.3209 KQNYDEMSPAGQISK-p Q14789-2;S972-p KQNYDEMSPAGQISK 0.476702687437192 0.0330505505523266 -0.104333333333333 -0.276 5.92452812770945 19.9669008477697 -0.104333333333333 -0.276 0.255591959331315 0.0100765047794892 -1.27110721678806 -3.86823850763745 Q14789 GOLGB1 Q14789.2.S972.p_GOLGB1 Q14789-2_S972s_1_1_972_972 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24774.24774.5 23.12 23.12 6.668 3 1 1 0 818.826 3994.1402 M971m S972s TMT10 966 (K) QNYDEmsPAGQISKEELQHEFDLLKK (E) QNY(0.0)DEM(1.0)S(0.99)PAGQIS(0.0)KEELQHEFDLLKK K:TMT10,m:Oxidized methionine,s:Phosphorylated S GOLGB1 378557.2 2 12 93.1 610.98 HUMAN 1 -5.9245 -19.9669 KQPGSIGSRKASVVD-p Q66K14;S407-p KQPGSIGSRKASVVD 0.167474891729899 0.0147249530242917 0.222333333333333 0.575333333333333 15.5089966484961 25.3681182412645 0.222333333333333 0.575333333333333 0.0281255053951918 0.00290528121387354 2.97447023370239 5.1310905731903 Q66K14 TBC1D9B Q66K14.S407.p_TBC1D9B Q66K14_S407s _1_1_407_407 Q66K14 Q66K14|Q66K14-2 TBC1 domain family member 9B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6728.6728.4 7.37 7.37 1.311 4 1 1 0 528.3048 2030.2325 S407s TMT10 397 (K) TPSKQPGSIGsRK (A) T(0.0)PS(0.0)KQPGS(0.0)IGS(0.99)RK K:TMT10,s:Phosphorylated S TBC1D9B 141663.3 2 4 988.1 191.79 HUMAN 1 15.509 25.3681 KQPKKVATPPNQNQK-p Q6NUQ4;T97-p KQPKKVATPPNQNQK 0.807254803092492 0.00667565213390983 0.0373333333333333 -0.495333333333333 1.79048587130278 31.2520005442904 0.0373333333333333 -0.495333333333333 0.662142421711019 0.000749548855852875 0.461886949179891 -6.81088540485252 Q6NUQ4 TMEM214 Q6NUQ4.T97.p_TMEM214 Q6NUQ4_T97t _1_1_97_97 Q6NUQ4 Q6NUQ4|Q6NUQ4-2 Transmembrane protein 214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7447.7447.3 15.17 10.35 99 1 1 1 0 664.7136 1912.1583 T97t TMT10 94 (K) KVAtPPNQNQK (Q) KVAT(1.0)PPNQNQK K:TMT10,t:Phosphorylated T TMEM214 78004.9 4 1 3964.1 40.11 HUMAN 1 1.7905 -31.252 KQQKPTLSGQRFKTR-p Q7L1Q6-3;S44-p KQQKPTLSGQRFKTR 0.219829853552073 0.0202313349346987 -0.242333333333333 -0.365333333333333 12.6623484168773 23.1998068839692 -0.242333333333333 -0.365333333333333 0.0541707886457796 0.00478651375853186 -2.4503981925196 -4.59661499831126 Q7L1Q6 BZW1 Q7L1Q6.3.S44.p_BZW1 Q7L1Q6-3_S44s _1_1_44_44 Q7L1Q6-3 Q7L1Q6-3|Q7L1Q6-4|Q7L1Q6-2 Isoform 3 of Basic leucine zipper and W2 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.6452.6452.3 8.59 8.59 2.535 2 1 1 0 560.9771 1600.9535 S44s TMT10 38 (K) QQKPTLsGQR (F) QQKPT(0.0)LS(0.99)GQR K:TMT10,s:Phosphorylated S BZW1 51452.2 2 1 4254.1 34.62 HUMAN 1 -12.6623 -23.1998 KQQNEGDSIISKLKQ-p Q15643;S527-p KQQNEGDSIISKLKQ 0.771987739194377 0.00773564910804752 -0.0413333333333333 -0.492333333333333 2.15020616208066 30.1475794026233 -0.0413333333333333 -0.492333333333333 0.60950796286094 0.000966589470226086 -0.541815174004066 -6.46683409870511 Q15643 TRIP11 Q15643.S527.p_TRIP11 Q15643_S527s _1_1_527_527 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12303.12303.2 14.81 8.35 3.495 2 1 1 0 878.9483 1676.9219 S527s TMT10 521 (K) QQNEGDsIISK (L) QQNEGDS(0.99)IIS(0.0)K K:TMT10,s:Phosphorylated S TRIP11 228267 2 8 463.1 303.86 HUMAN 1 -2.1502 -30.1476 KQQQHRLSVDANLQI-p O94913;S645-p KQQQHRLSVDANLQI 0.779056963761954 0.0107864844863671 -0.0423333333333333 -0.411666666666667 2.0822543629333 27.5687255466295 -0.0423333333333333 -0.411666666666667 0.619119615172915 0.00175036026301953 -0.526941774389407 -5.71707104369407 O94913 PCF11 O94913.S645.p_PCF11 O94913_S645s _1_1_645_645 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15752.15752.3 10.21 6.93 99 1 1 1 0 805.1097 2333.3454 S645s TMT10 639 (K) QQQHRLsVDANLQIPK (E) QQQHRLS(1.0)VDANLQIPK K:TMT10,s:Phosphorylated S PCF11 173731.7 2 10 508.1 288.88 HUMAN 1 -2.0823 -27.5687 KQQQLAASPPDSKKL-p P49796-5;S562-p KQQQLAASPPDSKKL 0.625010568942101 0.0032617758552342 0.0683333333333333 -0.635333333333333 3.79231520194046 37.2677354076938 0.0683333333333333 -0.635333333333333 0.417607682750338 0.000187597246324594 0.877216316176241 -8.96777950443983 P49796 RGS3 P49796.5.S562.p_RGS3 P49796-5_S562s _1_1_562_562 P49796-5 P49796-5|Q5VXC0 Isoform 5 of Regulator of G-protein signaling 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9757.9757.3 13.85 13.85 13.854 2 1 1 0 722.4025 2085.2271 S562s TMT10 556 (K) QQQLAAsPPDSKK (L) QQQLAAS(0.99)PPDS(0.0)KK K:TMT10,s:Phosphorylated S RGS3 68307.8 1 13 1029.2 186.27 HUMAN 1 3.7923 -37.2677 KQQQLAASPPDSKMF-p P49796;S674-p KQQQLAASPPDSKMF 0.494953966394269 0.0138811738705875 -0.0916666666666667 -0.365 5.62536764764567 25.7816528973677 -0.0916666666666667 -0.365 0.273818782590371 0.00264140326459283 -1.2175262067524 -5.23770339868357 P49796 RGS3 P49796.S674.p_RGS3 P49796_S674s _1_1_674_674 P49796 P49796|P49796-6|P49796-4|P49796-5|P49796-9|Q5VXC0 Regulator of G-protein signaling 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9859.9859.2 13.23 13.23 3.598 2 1 1 0 904.4712 1727.9692 S674s TMT10 668 (K) QQQLAAsPPDSK (M) QQQLAAS(0.99)PPDS(0.0)K K:TMT10,s:Phosphorylated S RGS3 134216.1 3 3 1029.1 186.27 HUMAN 1 -5.6254 -25.7817 KQQSIAGSADSKPID-p Q12904-2;S168-p KQQSIAGSADSKPID 0.804284889349789 0.901928595146833 0.041 -0.015 1.82376075209336 0.624722588328324 0.041 -0.015 0.65708858823192 0.866019639808512 0.469408932147205 -0.176883470712418 Q12904 AIMP1 Q12904.2.S168.p_AIMP1 Q12904-2_S168s _1_1_168_168 Q12904-2 Q12904-2 Isoform 2 of Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12051.12051.3 16.17 14.4 2 4 1 1 0 766.4033 2217.2239 S168s TMT10 162 (K) QQSIAGsADSKPIDVSR (L) QQS(0.0)IAGS(0.99)ADS(0.0)KPIDVS(0.0)R K:TMT10,s:Phosphorylated S AIMP1 37380.8 1 3 2576.1 78.03 HUMAN 1 1.8238 -0.6247 KQRNRGPSPEPLKLM-p Q92674;S284-p KQRNRGPSPEPLKLM 0.429127503754833 0.00344325143052596 -0.160333333333333 0.602333333333333 6.76616094466207 36.8090396750494 -0.160333333333333 0.602333333333334 0.210563894984895 0.0002084951862922 -1.42001558367094 8.78465955922393 Q92674 CENPI Q92674.S284.p_CENPI Q92674_S284s _1_1_284_284 Q92674 Q92674|Q92674-2 Centromere protein I HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7852.7852.3 11.05 11.05 99 1 1 1 0 544.9678 1552.9211 S284s TMT10 280 (R) NRGPsPEPLK (L) NRGPS(1.0)PEPLK K:TMT10,s:Phosphorylated S CENPI 87802.8 7 1 4098.1 37.68 HUMAN 1 -6.7662 36.809 KQSAGPNSPTGGGGG-p A7E2V4-4;S53-p KQSAGPNSPTGGGGG 0.146674740935683 0.00575422933881225 0.621333333333333 -0.954333333333333 16.9481481231662 32.4137352029891 0.621333333333333 -0.954333333333334 0.0201922719961 0.000573622898576486 3.25242909143005 -7.18885780947324 A7E2V4 ZSWIM8 A7E2V4.4.S53.p_ZSWIM8 A7E2V4-4_S53s _1_1_53_53 A7E2V4-4 A7E2V4-2|A7E2V4-4|A7E2V4-3|S4R410|A7E2V4-5|S4R393|S4R3H3|H7BZ52 Isoform 4 of Zinc finger SWIM domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.3643.3643.3 18.22 13.61 2.516 5 1 1 0 794.7226 2302.19 S53s TMT10 46 (R) KQSAGPNsPTGGGGGGGSGGTR (M) KQS(0.0)AGPNS(0.99)PT(0.0)GGGGGGGS(0.0)GGT(0.0)R K:TMT10,s:Phosphorylated S ZSWIM8 199945.4 1 2 805.1 222.5 HUMAN 1 16.9481 -32.4137 KQSLIPRTPKARKRK-p Q5QJE6;T61-p KQSLIPRTPKARKRK 0.228121437400058 0.0052485064183447 -0.194666666666667 -0.682 12.3315885578599 33.1611122220379 -0.194666666666667 -0.682 0.0584576219348911 0.000482935107202136 -2.3912910273202 -7.44115324323109 Q5QJE6 DNTTIP2 Q5QJE6.T61.p_DNTTIP2 Q5QJE6_T61t _1_1_61_61 Q5QJE6 Q5QJE6|J3KP30 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12178.12514.3 10.13 4.78 3.684 2 1 1 0 526.6448 1497.9517 T61t TMT10 55 (K) QSLIPRtPK (A) QS(0.0)LIPRT(0.99)PK K:TMT10,t:Phosphorylated T DNTTIP2 84866.9 1 3 448.1 309.47 HUMAN 1 -12.3316 -33.1611 KQSNPKSSPGQPEAG-p P40222;S19-p KQSNPKSSPGQPEAG 0.345788111527743 0.0435385217303294 0.242666666666667 -0.488666666666667 8.56779034840965 18.2351708916083 0.242666666666667 -0.488666666666667 0.139066000665339 0.0150135332746893 1.7335442265687 -3.50709807202397 P40222 TXLNA P40222.S19.p_TXLNA P40222_S19s _1_1_19_19 P40222 P40222 Alpha-taxilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10451.10451.3 19.62 15 1.108 5 1 1 0 1265.2617 3713.7953 S19s TMT10 18 (K) SsPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR (K) S(0.0)S(0.99)PGQPEAGPEGAQERPS(0.0)QAAPAVEAEGPGS(0.0)S(0.0)QAPR s:Phosphorylated S TXLNA 62232.4 5 1 1073.1 180.65 HUMAN 1 8.5678 -18.2352 KQSNVEDSPEKTCSI-p Q9UPX8-3;S1022-p KQSNVEDSPEKTCSI 0.176763930216654 0.00360190067498438 0.423666666666667 -1.029 14.9281545961677 36.3872918828533 0.423666666666667 -1.029 0.0321502637723449 0.000229758089718118 2.86498733666735 -8.61922502393434 Q9UPX8 SHANK2 Q9UPX8.3.S1022.p_SHANK2 Q9UPX8-3_S1022s _1_1_1022_1022 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6|Q9UPX8-4|E7EUA2 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6801.6801.2 14.62 10.86 3.014 2 1 1 0 835.9053 1590.8375 S1022s TMT10 1016 (K) QSNVEDsPEK (T) QS(0.0)NVEDS(0.99)PEK K:TMT10,s:Phosphorylated S SHANK2 202341.2 7 13 86.1 628.23 HUMAN 1 14.9282 -36.3873 KQSPGHQSPLASPKV-p Q8N1G0;S271-p KQSPGHQSPLASPKV 0.578846851201194 0.00610513292104681 0.095 0.496333333333333 4.36709822217597 31.935063565031 0.095 0.496333333333333 0.365839148702293 0.00064046240744362 0.986681968215142 7.03106829877385 Q8N1G0 ZNF687 Q8N1G0.S271.p_ZNF687 Q8N1G0_S271s _1_1_271_271 Q8N1G0 Q8N1G0|Q8N1G0-2|F8WCX2 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7170.7170.3 17.64 17.64 4.748 3 1 1 0 624.6646 1792.0118 S271s TMT10 265 (K) QSPGHQsPLASPK (V) QS(0.0)PGHQS(0.99)PLAS(0.0)PK K:TMT10,s:Phosphorylated S ZNF687 131979.7 5 7 156.1 501.88 HUMAN 1 4.3671 31.9351 KQSSFILTPPRRKIP-p Q8N0S6-2;T43-p KQSSFILTPPRRKIP 0.610770564629011 0.286646167838699 0.085 0.102666666666667 3.96618095719498 7.15829850733814 0.085 0.102666666666667 0.401219381669419 0.192384531148303 0.910659539177624 1.48827453422434 Q8N0S6 CENPL Q8N0S6.2.T43.p_CENPL Q8N0S6-2_T43t _1_1_43_43 Q8N0S6-2 Q8N0S6-2|Q8N0S6-3 Isoform 2 of Centromere protein L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20136.20344.3 13.25 9.04 5.956 3 1 1 0 485.5912 1374.7943 T43t TMT10 37 (K) QSSFILtPPR (R) QS(0.0)S(0.0)FILT(0.99)PPR t:Phosphorylated T CENPL 44423 9 2 2413.1 84.52 HUMAN 1 3.9662 7.1583 KQTAGQGSPCEEQEE-p O14686-3;S1180-p KQTAGQGSPCEEQEE 0.787952750145453 0.175844262468618 0.0393333333333333 0.140333333333333 1.99696743457422 9.92641572789388 0.0393333333333333 0.140333333333333 0.631398079444326 0.101708775841432 0.508130352270153 1.96813983210861 O14686 KMT2D O14686.3.S1180.p_KMT2D O14686-3_S1180s_1_1_1180_1180 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21863.21863.3 20.32 20.32 3.465 4 1 1 0 1094.1977 3217.6361 Q1174q S1180s Hydrogen 1174 (K) qTAGQGsPCEEQEEPRAPVAPTPPTLIK (S) Q(1.0)T(0.0)AGQGS(0.99)PCEEQEEPRAPVAPT(0.0)PPT(0.0)LIK C:Carbamidomethylation,K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S KMT2D 600227.3 5 7 17.1 1042.08 HUMAN 1 1.997 9.9264 KQTDKVPSKTVAAKK-p Q02880;S1489-p KQTDKVPSKTVAAKK 0.824471469058163 0.509198654809084 0.035 0.0656666666666667 1.61612730244388 3.93034115070485 0.035 0.0656666666666667 0.689266656326879 0.404544112355193 0.422006493505144 0.90363953079005 Q02880 TOP2B Q02880.S1489.p_TOP2B Q02880_S1489s _1_1_1489_1489 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8407.8407.3 8.7 8.7 8.699 2 1 1 0 557.3229 1589.983 S1489s TMT10 1483 (K) QTDKVPsK (T) QT(0.0)DKVPS(0.99)K K:TMT10,s:Phosphorylated S TOP2B 184233.7 1 41 71.1 658.36 HUMAN 1 1.6161 3.9303 KQTDLELSPLTKEEK-p Q8WVK7;S101-p KQTDLELSPLTKEEK 0.455840880261612 0.00372619220137502 -0.116 -0.653666666666667 6.29277248616488 36.0338137900685 -0.116 -0.653666666666667 0.234813332088524 0.00024924050411701 -1.33655551444633 -8.48269568491181 Q8WVK7 SKA2 Q8WVK7.S101.p_SKA2 Q8WVK7_S101s _1_1_101_101 Q8WVK7 Q8WVK7|J3KTC5 Spindle and kinetochore-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19662.19662.3 17.96 17.96 4.239 3 1 1 0 800.1106 2318.3422 S101s TMT10 95 (K) QTDLELsPLTKEEK (T) QT(0.0)DLELS(0.99)PLT(0.0)KEEK K:TMT10,s:Phosphorylated S SKA2 14245.2 4 1 4590.1 29.14 HUMAN 1 -6.2928 -36.0338 KQTPGMKSPEEQLVC-p Q9UK61;S945-p KQTPGMKSPEEQLVC 0.940215525927245 0.515901623576143 -0.0123333333333333 0.0696666666666667 0.52513465063106 3.85920540961589 -0.0123333333333334 0.0696666666666667 0.886107749946994 0.411224952431782 -0.15011895832692 0.889972217789492 Q9UK61 FAM208A Q9UK61.S945.p_FAM208A Q9UK61_S945s _1_1_945_945 Q9UK61 Q9UK61|Q9UK61-3 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21199.21199.4 20.2 20.2 2.159 2 1 1 0 873.179 3409.7285 S945s TMT10 939 (K) QTPGMKsPEEQLVCVPPQEAFPNDPR (V) Q(0.0)T(0.0)PGM(0.0)KS(0.99)PEEQLVCVPPQEAFPN(0.0)DPR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S FAM208A 190568.5 8 11 246.1 411.17 HUMAN 1 -0.5251 3.8592 KQTQRAQSENLELLS-p Q9BYI3;S415-p KQTQRAQSENLELLS 0.233020295351196 0.301368477994011 -0.254666666666667 -0.105 12.1599011726039 6.87730360779662 -0.254666666666667 -0.105 0.0608148840064372 0.205243607366414 -2.36072908937189 -1.43912766853304 Q9BYI3 FAM126A Q9BYI3.S415.p_FAM126A Q9BYI3_S415s _1_1_415_415 Q9BYI3 Q9BYI3|Q9BYI3-2 Hyccin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26092.26092.3 12.62 8.45 12.621 2 1 1 0 628.3502 1803.0628 S415s TMT10 413 (R) AQsENLELLSLK (R) AQS(0.99)ENLELLS(0.0)LK K:TMT10,s:Phosphorylated S FAM126A 58366.1 2 2 2241.1 92.02 HUMAN 1 -12.1599 -6.8773 KQTSDNLSEECQLAR-p Q6ULP2;S508-p KQTSDNLSEECQLAR 0.200535848249369 0.0326390716051162 -0.248666666666667 0.292 13.577773141773 20.0576228171788 -0.248666666666667 0.292 0.0438755613388474 0.00986819489829661 -2.61571839112371 3.88767652505701 Q6ULP2 AFTPH Q6ULP2.S508.p_AFTPH Q6ULP2_S508s _1_1_508_508 Q6ULP2 Q6ULP2|Q6ULP2-4|Q6ULP2-2|Q6ULP2-5|Q6ULP2-3 Aftiphilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11640.11640.3 8.17 8.17 1.351 3 1 1 0 773.0475 2237.1596 S508s TMT10 502 (K) QTSDNLsEECQLARK (S) QT(0.0)S(0.0)DNLS(0.99)EECQLARK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AFTPH 102996.9 2 6 973.1 193.16 HUMAN 1 -13.5778 20.0576 KQVFANPSPTQKSPV-p Q6EKJ0;S516-p KQVFANPSPTQKSPV 0.414307072468647 0.103928849619752 -0.132666666666667 0.236 7.06143862927579 12.9894297391821 -0.132666666666667 0.236 0.196723452227852 0.0502408555155453 -1.47176349253427 2.50778780483192 Q6EKJ0 GTF2IRD2B Q6EKJ0.S516.p_GTF2IRD2B Q6EKJ0_S516s _1_1_516_516 Q6EKJ0 A0A0A0MSY2|Q6EKJ0 General transcription factor II-I repeat domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14021.14021.2 10.63 10.63 1.826 2 1 1 0 877.9694 1674.9579 S516s TMT10 510 (K) QVFANPsPTQK (S) QVFANPS(0.99)PT(0.0)QK K:TMT10,s:Phosphorylated S GTF2IRD2B 108600.4 3 2 3816.1 42.53 HUMAN 1 -7.0614 12.9894 KQVNERATLFRITSN-p P22059;T263-p KQVNERATLFRITSN 0.827264797305235 0.0142580161297992 -0.034 0.478666666666667 1.58417941803279 25.5971302290865 -0.034 0.478666666666667 0.694355785055088 0.00275604926928301 -0.414611035592007 5.18993844535461 P22059 OSBP P22059.T263.p_OSBP P22059_T263t _1_1_263_263 P22059 P22059 Oxysterol-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10339.10339.3 12.88 12.88 99 1 1 1 0 514.938 1462.8328 T263t TMT10 257 (K) QVNERAtLFR (I) QVNERAT(1.0)LFR t:Phosphorylated T OSBP 90274.8 1 6 468.1 302.79 HUMAN 1 -1.5842 25.5971 KQVSDLISVLREANQ-p P17844;S458-p KQVSDLISVLREANQ 0.646461015272089 0.812728311323618 -0.091 0.0473333333333333 3.548744225937 1.26161962710992 -0.091 0.0473333333333334 0.441698147085873 0.747890535492571 -0.829825101730797 0.338239427201767 P17844 DDX5 P17844.S458.p_DDX5 P17844_S458s _1_1_458_458 P17844 P17844|J3KTA4|P17844-2 Probable ATP-dependent RNA helicase DDX5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34491.34491.4 7.5 7.5 7.504 2 1 1 0 659.1151 2553.4765 S458s TMT10 452 (K) QVSDLIsVLREANQAINPK (L) QVS(0.0)DLIS(0.99)VLREANQAINPK K:TMT10,s:Phosphorylated S DDX5 69660.3 1 11 2075.1 99 HUMAN 1 -3.5487 1.2616 KQVTCENSPKSPKVT-p Q02224;S2605-p KQVTCENSPKSPKVT 0.250022301597546 0.00504553803227928 -0.18 -1 11.4915416964407 33.476174286952 -0.18 -1 0.0709325920560946 0.000449140865248049 -2.24245900330915 -7.54972944836967 Q02224 CENPE Q02224.S2605.p_CENPE Q02224_S2605sS2608s_2_2_2605_2608 Q02224 Q02224|Q02224-2|A0A087X0P0|Q02224-3 Centromere-associated protein E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8180.8180.3 7.38 7.38 2.247 3 2 2 0 741.3668 2062.157 S2605s S2608s TMT10 2599 (K) QVTCENsPKsPK (V) QVT(0.0)CENS(0.99)PKS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CENPE 317778.9 5 7 2732.1 72.4 HUMAN 1 -11.4915 -33.4762 KQWLGKVSPEDVEYF-p O14647;S356-p KQWLGKVSPEDVEYF 0.223663787104468 0.0908933218086992 0.250666666666667 0.265333333333333 12.4995049155228 13.7758557605053 0.250666666666667 0.265333333333333 0.0562405434301108 0.0419193388107705 2.4212592651031 2.65029761408074 O14647 CHD2 O14647.S356.p_CHD2 O14647_S356s _1_1_356_356 O14647 O14647|O14647-2 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30022.30022.4 11.39 11.39 7.091 3 1 1 0 970.4861 3798.9616 S356s TMT10 350 (K) QWLGKVsPEDVEYFNCQQELASELNK (Q) QWLGKVS(0.99)PEDVEY(0.0)FNCQQELAS(0.0)ELNK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CHD2 212309.6 1 3 482.1 298.11 HUMAN 1 12.4995 13.7759 KQYDFHSSDEDEFPQ-p Q52LR7;S373-p KQYDFHSSDEDEFPQ 0.459299895698651 0.0823409353972692 0.119333333333333 0.257333333333333 6.22931609051566 14.3662998459662 0.119333333333333 0.257333333333333 0.238269465698864 0.0365906408161821 1.32531332535774 2.7587157479737 Q52LR7 EPC2 Q52LR7.S373.p_EPC2 Q52LR7_S372sS373s_2_2_372_373 Q52LR7 Q52LR7 Enhancer of polycomb homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28990.28990.4 8.88 8.88 1.282 5 2 2 0 1115.4547 4297.8618 S372s S373s N392n TMT10 367 (K) QYDFHssDEDEFPQVLSPVSEPEEEnDPDGPCAFR (R) QY(0.0)DFHS(0.99)S(0.99)DEDEFPQVLS(0.0)PVS(0.0)EPEEEN(1.0)DPDGPCAFR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated EPC2 91949.1 1 5 1676.1 121.76 HUMAN 1 6.2293 14.3663 KQYVVVSSKKILFYN-p Q13464;S1147-p KQYVVVSSKKILFYN 0.239911948391928 0.056330355064178 0.217666666666667 0.263 11.8484433434836 16.6460333849092 0.217666666666667 0.263 0.0653364698418278 0.0216469473828549 2.30548119117335 3.19087110297977 Q13464 ROCK1 Q13464.S1147.p_ROCK1 Q13464_S1147s _1_1_1147_1147 Q13464 Q13464 Rho-associated protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13603.13603.3 11.44 10.68 1.58 3 1 1 0 483.27 1367.8299 S1147s TMT10 1141 (K) QYVVVSsK (K) QY(0.0)VVVS(0.0)S(0.99)K K:TMT10,s:Phosphorylated S ROCK1 159198.9 3 5 2757.1 71.63 HUMAN 1 11.8484 16.646 KRAAGGGSYKGHVDI-p Q92499;S700-p KRAAGGGSYKGHVDI 0.484082197009787 0.734957382542809 -0.231333333333333 0.0536666666666667 5.80393430160801 1.8442521551981 -0.231333333333333 0.0536666666666667 0.262788629418678 0.653995536790143 -1.24955623229512 0.473973980636883 Q92499 DDX1 Q92499.S700.p_DDX1 Q92499_S700s _1_1_700_700 Q92499 Q92499|F1T0B3|A0A087X2G1|Q92499-3 ATP-dependent RNA helicase DDX1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27663.27663.5 15.75 13.78 4.24 3 1 1 0 627.5396 3053.7036 S700s Hydrogen 695 (R) AAGGGsYKGHVDILAPTVQELAALEK (E) AAGGGS(0.99)Y(0.0)KGHVDILAPT(0.0)VQELAALEK K:TMT10-Lys-Only,s:Phosphorylated S DDX1 83400.6 1 5 2710.1 73.19 HUMAN 1 -5.8039 1.8443 KRAFINGTGVETVVS-p Q07954;T1647-p KRAFINGTGVETVVS 0.132946954128706 0.467680427918096 0.592 0.217666666666667 18.0689269033987 4.39967968952594 0.592 0.217666666666667 0.0155993789967991 0.363104834293562 3.47622819930113 0.992617732300397 Q07954 LRP1 Q07954.T1647.p_LRP1 Q07954_T1647t_1_1_1647_1647 Q07954 Q07954 Prolow-density lipoprotein receptor-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24093.24093.5 7.22 7.22 1.102 8 1 1 0 1013.2964 4979.5845 N1645n T1647t N1659n N1671n TMT10 1641 (K) RAFInGtGVETVVSADLPnAHGLAVDWVSRnLFWTSYDTNK (K) RAFIN(0.99)GT(0.99)GVET(0.0)VVS(0.0)ADLPN(0.99)AHGLAVDWVS(0.0)RN(0.99)LFWT(0.0)S(0.0)Y(0.0)DT(0.0)N(0.0)K K:TMT10,n:Deamidated,t:Phosphorylated T LRP1 523482.6 1 1 6483.1 11.43 HUMAN 1 18.0689 4.3997 KRASPPVSPIPVSEY-p Q2M2Z5;S321-p KRASPPVSPIPVSEY 0.326723539523319 0.715360291178607 -0.248666666666667 -0.0456666666666667 9.0914587428062 2.00100407146642 -0.248666666666667 -0.0456666666666667 0.123269071773383 0.630811486528091 -1.82419612878011 -0.508965283707779 Q2M2Z5 KIZ Q2M2Z5.S321.p_KIZ Q2M2Z5_S317sS321s_2_2_317_321 Q2M2Z5 Q2M2Z5|Q2M2Z5-4|Q2M2Z5-3|A0A087X251|Q2M2Z5-2|Q2M2Z5-5 Centrosomal protein kizuna HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18133.18133.4 15.24 15.24 3.951 5 2 2 0 716.8403 2704.4016 S317s S321s TMT10 315 (K) RAsPPVsPIPVSEYCESENK (W) RAS(0.99)PPVS(0.99)PIPVS(0.0)EY(0.0)CES(0.0)ENK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIZ 75794.3 3 6 2276.1 90.11 HUMAN 1 -9.0915 -2.001 KRAVRKMSVMGRQTC-p Q7Z3K3;S746-p KRAVRKMSVMGRQTC 0.0734347857517839 0.0137719194356848 -0.416666666666667 0.659 24.3514709793072 25.8469182380267 -0.416666666666667 0.659 0.00367157921027135 0.00260200529616878 -4.88137739939324 5.25467303455853 Q7Z3K3 POGZ Q7Z3K3.S746.p_POGZ Q7Z3K3_S746s _1_1_746_746 Q7Z3K3 Q7Z3K3|Q7Z3K3-6|Q7Z3K3-3|Q7Z3K3-2|Q7Z3K3-7|Q7Z3K3-5 Pogo transposable element with ZNF domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9471.9471.3 8.49 8.49 99 1 1 1 0 449.574 1266.7427 S746s TMT10 744 (R) KMsVMGR (Q) KMS(1.0)VMGR K:TMT10,s:Phosphorylated S POGZ 157451.9 2 10 811.1 221.02 HUMAN 1 -24.3515 25.8469 KRDADEESIEDVDDE-p Q03701;S835-p KRDADEESIEDVDDE 0.477813549913587 0.130335982429018 -0.238 0.243333333333333 5.90168109617606 11.6623245200481 -0.238 0.243333333333333 0.256940100929314 0.0681973576545026 -1.26702904098463 2.27148353871367 Q03701 CEBPZ Q03701.S835.p_CEBPZ Q03701_S835s _1_1_835_835 Q03701 Q03701 CCAAT/enhancer-binding protein zeta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37219.37219.5 31.14 31.14 8.33 4 1 1 0 1121.4807 5523.4143 S835s TMT10 830 (R) DADEEsIEDVDDEEFEELIDTFEDDNCFSSGKDDMDFAGNVK (K) DADEES(0.99)IEDVDDEEFEELIDT(0.0)FEDDNCFS(0.0)S(0.0)GKDDMDFAGNVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CEBPZ 121599.4 4 4 1132.1 173.97 HUMAN 1 -5.9017 11.6623 KRDLIDNSFNRYTFN-p Q8IY81;S688-p KRDLIDNSFNRYTFN 0.458964628123898 0.00133038413689346 0.111 -0.938666666666667 6.23736710975231 46.781194296041 0.111 -0.938666666666667 0.237828167194861 2.09836276117451e-05 1.32674046133899 -13.6464049640887 Q8IY81 FTSJ3 Q8IY81.S688.p_FTSJ3 Q8IY81_S688s _1_1_688_688 Q8IY81 Q8IY81 pre-rRNA processing protein FTSJ3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15724.15724.2 14.1 12.02 99 1 1 1 0 701.8325 1322.6902 S688s TMT10 683 (R) DLIDNsFNR (Y) DLIDNS(1.0)FNR s:Phosphorylated S FTSJ3 96956.1 4 7 631.1 257.01 HUMAN 1 6.2374 -46.7812 KRDPLQNSPGSEGKT-p Q6IE81;S603-p KRDPLQNSPGSEGKT 0.400124584561269 0.0279776566989861 -0.133333333333333 -0.496333333333333 7.33780631559442 21.0487802372039 -0.133333333333333 -0.496333333333333 0.184594759863132 0.00785456207463316 -1.52002442461592 -4.10363341576087 Q6IE81 JADE1 Q6IE81.S603.p_JADE1 Q6IE81_S603s _1_1_603_603 Q6IE81 Q6IE81|Q6IE81-2 Protein Jade-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11897.11897.3 14.65 14.65 5.485 2 1 1 0 589.6305 1686.9063 S603s TMT10 598 (R) DPLQNsPGSEGK (T) DPLQNS(0.99)PGS(0.0)EGK K:TMT10,s:Phosphorylated S JADE1 97129.2 4 3 1555.1 131.82 HUMAN 1 -7.3378 -21.0488 KREDQEGSPPETSLP-p P10244;S282-p KREDQEGSPPETSLP 0.896873028140097 0.023571183995088 0.0253333333333333 -0.435666666666667 0.926211113115154 22.1979477084966 0.0253333333333333 -0.435666666666667 0.807939588307464 0.00602844397465085 0.255265449717132 -4.36267526234807 P10244 MYBL2 P10244.S282.p_MYBL2 P10244_S282s _1_1_282_282 P10244 P10244|P10244-2 Myb-related protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20371.20371.4 17.79 14.18 2.642 5 1 1 0 942.7286 3687.9361 S282s TMT10 266 (R) TPEPLEEFPKREDQEGsPPETSLPYK (W) T(0.0)PEPLEEFPKREDQEGS(0.99)PPET(0.0)S(0.0)LPY(0.0)K K:TMT10,s:Phosphorylated S MYBL2 79390.3 1 3 752.1 231.53 HUMAN 1 0.9262 -22.1979 KREDSFESLDSLGSR-p Q8WWI1-3;S249-p KREDSFESLDSLGSR 0.182722695333724 0.0315230768754471 0.290666666666667 -0.361666666666667 14.5145108294246 20.2828725045679 0.290666666666667 -0.361666666666667 0.0353629850198547 0.00936942090991897 2.78788346636676 -3.93617263812286 Q8WWI1 LMO7 Q8WWI1.3.S249.p_LMO7 Q8WWI1-3_S246sS249s_2_2_246_249 Q8WWI1-3 Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17073.17073.3 8.09 8.09 3.82 4 2 2 0 662.9512 1826.9082 S246s S249s TMT10 243 (K) REDsFEsLDSLGSR (S) REDS(0.99)FES(0.99)LDS(0.0)LGS(0.0)R s:Phosphorylated S LMO7 154694.3 1 32 61.1 704.74 HUMAN 1 14.5145 -20.2829 KREFDRHSGSDRSSF-p Q8NC51;S197-p KREFDRHSGSDRSSF 0.036022948076598 0.013553129213367 -0.788 -0.919666666666667 33.4345631356072 25.9625637098488 -0.788 -0.919666666666667 0.00045346491031096 0.00253363254510985 -7.54909167402253 -5.28483921536397 Q8NC51 SERBP1 Q8NC51.S197.p_SERBP1 Q8NC51_S197s _1_1_197_197 Q8NC51 Q8NC51|Q8NC51-2|Q8NC51-3|Q8NC51-4 Plasminogen activator inhibitor 1 RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3979.3979.4 12.88 12.88 1.244 2 1 1 0 379.4199 1434.6923 S197s TMT10 192 (R) EFDRHsGSDR (S) EFDRHS(0.99)GS(0.0)DR s:Phosphorylated S SERBP1 45021.6 4 5 616.1 261.14 HUMAN 1 -33.4346 -25.9626 KREFSGGSYSAKRQP-p Q5VT25-2;S1676-p KREFSGGSYSAKRQP 0.855617058874679 0.789077787702177 0.029 -0.057 1.31722668985081 1.42970873312169 0.029 -0.057 0.738375590213131 0.71949723067413 0.351661816568122 -0.378405171271279 Q5VT25 CDC42BPA Q5VT25.2.S1676.p_CDC42BPA Q5VT25-2_S1676s _1_1_1676_1676 Q5VT25-2 Q5VT25-6|Q5VT25-2 Isoform 2 of Serine/threonine-protein kinase MRCK alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12033.12033.3 7.79 7.79 1.522 4 1 1 0 524.2577 1490.7891 S1676s TMT10 1671 (R) EFSGGsYSAK (R) EFS(0.0)GGS(0.99)Y(0.0)S(0.0)AK K:TMT10,s:Phosphorylated S CDC42BPA 201918 1 13 917.1 200.65 HUMAN 1 1.3172 -1.4297 KREGQAGSPEKPLSD-p Q92794;S678-p KREGQAGSPEKPLSD 0.521650836138955 0.00714231278100688 0.103 -0.575333333333333 5.22525027221568 30.728582564626 0.103 -0.575333333333333 0.300244439309006 0.000845554769383986 1.145180784262 -6.64602322820421 Q92794 KAT6A Q92794.S678.p_KAT6A Q92794_S678s _1_1_678_678 Q92794 Q8WYB5|Q92794|Q8WYB5-2|Q8WYB5-3|A5PLL3 Histone acetyltransferase KAT6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13830.13830.3 12.85 10.12 4.876 2 1 1 0 727.0439 2099.1497 S678s TMT10 673 (R) EGQAGsPEKPLSDLGR (L) EGQAGS(0.99)PEKPLS(0.0)DLGR K:TMT10,s:Phosphorylated S KAT6A 227705.4 1 10 903.1 203.52 HUMAN 1 5.2253 -30.7286 KREKKIDSEEEENEL-p A0A1B0GUA8;S1569-p KREKKIDSEEEENEL 0.658549271083176 0.787520307114838 -0.0623333333333333 0.028 3.40398894312119 1.44029821187955 -0.0623333333333334 0.028 0.456668552298983 0.717745005027881 -0.801337626421159 0.380906396176958 A0A1B0GUA8 NotFound A0A1B0GUA8.S1569.p_NotFound A0A1B0GUA8_S1569s _1_1_1569_1569 A0A1B0GUA8 A0A1B0GUA8|Q9H1H9 Kinesin-like protein KIF13A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16220.16220.4 15.08 15.08 99 1 1 1 0 614.8053 2376.2295 S1569s TMT10 1566 (K) KIDsEEEENELEAINR (K) KIDS(1.0)EEEENELEAINR K:TMT10,s:Phosphorylated S KIF13A 208874.1 6 9 1079.1 180.11 HUMAN 1 -3.404 1.4403 KREKTIASDSEEEAG-p Q96ST2;S438-p KREKTIASDSEEEAG 0.138843305977825 0.00503022227288404 -0.707 0.529333333333333 17.5582017736039 33.5056507183955 -0.707 0.529333333333333 0.0175460685858294 0.000446102778455861 -3.37339921891795 7.55995606162158 Q96ST2 IWS1 Q96ST2.S438.p_IWS1 Q96ST2_S438s _1_1_438_438 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10995.10995.2 16.54 16.54 1.438 3 1 1 0 887.93 1694.8849 S438s TMT10 435 (K) TIAsDSEEEAGK (E) T(0.0)IAS(0.99)DS(0.0)EEEAGK K:TMT10,s:Phosphorylated S IWS1 92010 2 7 230.1 422.87 HUMAN 1 -17.5582 33.5057 KRELPSLSPAPDTGL-p Q9UBF8-2;S258-p KRELPSLSPAPDTGL 0.452192101778898 0.933464623594446 0.120333333333333 -0.0093333333333333 6.3588071622813 0.422021795920941 0.120333333333333 -0.00933333333333331 0.231269991150127 0.90739800565646 1.34823974848187 -0.121861328508043 Q9UBF8 PI4KB Q9UBF8.2.S258.p_PI4KB Q9UBF8-2_S258s _1_1_258_258 Q9UBF8-2 A0A0B4J1S8|Q9UBF8|Q9UBF8-2 Isoform 2 of Phosphatidylinositol 4-kinase beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22791.22791.3 16.64 13.27 2.281 5 1 1 0 745.3972 2154.2058 S258s TMT10 253 (R) ELPSLsPAPDTGLSPSK (R) ELPS(0.0)LS(0.99)PAPDT(0.0)GLS(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S PI4KB 90547.4 9 2 325.1 361.79 HUMAN 1 6.3588 -0.422 KRELRTFSFSDDENK-p Q9UHJ3;S765-p KRELRTFSFSDDENK 0.118247229564978 0.0316359987498557 0.321333333333333 0.283666666666667 19.297010962035 20.2574828586915 0.321333333333333 0.283666666666667 0.0117570645818967 0.00942435667567466 3.72967916102191 3.93068944744696 Q9UHJ3 SFMBT1 Q9UHJ3.S765.p_SFMBT1 Q9UHJ3_S765sS767s_2_2_765_767 Q9UHJ3 Q9UHJ3|Q9UHJ3-2 Scm-like with four MBT domains protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19671.19671.3 11.09 9.01 1.251 4 2 2 0 848.4108 2383.2749 S765s S767s TMT10 763 (R) TFsFsDDENKPPSPK (E) T(0.0)FS(0.99)FS(0.99)DDENKPPS(0.0)PK K:TMT10,s:Phosphorylated S SFMBT1 99737.2 9 5 3632.1 46.53 HUMAN 1 19.297 20.2575 KRESESESDETPPAA-p O60832;S455-p KRESESESDETPPAA 0.663377338382 0.0259210237700486 0.062 0.316666666666667 3.33487406623789 21.5705276069006 0.062 0.316666666666667 0.463994244376791 0.00696541888897599 0.787645632368431 4.22005414492145 O60832 DKC1 O60832.S455.p_DKC1 O60832_S451sS453sS455s_3_3_451_455 O60832 O60832 H/ACA ribonucleoprotein complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13439.13439.4 11.93 11.93 2.203 4 3 3 0 856.6787 3183.7941 S451s S453s S455s Hydrogen 447 (K) RKREsEsEsDETPPAAPQLIKK (E) RKRES(0.99)ES(0.99)ES(0.99)DET(0.0)PPAAPQLIKK K:TMT10-Lys-Only,s:Phosphorylated S DKC1 58129.5 74 10 363.1 342.61 HUMAN 1 3.3349 21.5705 KREVHNRSPVSFREG-p Q9H0K1;S576-p KREVHNRSPVSFREG 0.289489257415299 0.347972239545951 -0.221 0.217666666666667 10.1525393639712 6.07823467736666 -0.221 0.217666666666667 0.0965486184330735 0.246704193803522 -2.00822466421679 1.29817586494913 Q9H0K1 SIK2 Q9H0K1.S576.p_SIK2 Q9H0K1_S576s _1_1_576_576 Q9H0K1 Q9H0K1 Serine/threonine-protein kinase SIK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5258.5258.4 11.15 11.15 2.045 2 1 1 0 409.9596 1556.8495 S576s TMT10 571 (R) EVHNRsPVSFR (E) EVHNRS(0.99)PVS(0.0)FR s:Phosphorylated S SIK2 104769.2 1 6 1626.1 126.2 HUMAN 1 -10.1525 6.0782 KREVLYDSEGLSGEE-p Q9H7N4;S734-p KREVLYDSEGLSGEE 0.681659995508636 0.150977171384263 0.0583333333333333 -0.163 3.12164313296577 10.796740935384 0.0583333333333333 -0.163 0.487344070856771 0.0832388183652554 0.74501292702035 -2.11960161502188 Q9H7N4 SCAF1 Q9H7N4.S734.p_SCAF1 Q9H7N4_S734sS738s_2_2_734_738 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18093.18093.3 10.94 10.94 5.131 3 2 2 0 657.9459 1811.8861 S734s S738s TMT10 729 (R) EVLYDsEGLsGEER (G) EVLY(0.0)DS(0.99)EGLS(0.99)GEER s:Phosphorylated S SCAF1 139895 2 29 76.1 647.25 HUMAN 1 3.1216 -10.7967 KREYEIPSNLTPADV-p Q8WUM0;S681-p KREYEIPSNLTPADV 0.535600087803484 0.0827423909058082 0.0906666666666667 0.259 5.01973397005115 14.3309652648524 0.0906666666666667 0.259 0.314794113740578 0.0368895598557544 1.10767324260937 2.75219085360791 Q8WUM0 NUP133 Q8WUM0.S681.p_NUP133 Q8WUM0_S681s _1_1_681_681 Q8WUM0 Q8WUM0 Nuclear pore complex protein Nup133 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.34819.34819.3 14.83 12.05 1.172 3 1 1 0 736.359 2127.096 S681s TMT10 676 (R) EYEIPsNLTPADVFFR (E) EY(0.0)EIPS(0.99)NLT(0.0)PADVFFR s:Phosphorylated S NUP133 130003.6 2 13 652.1 254.15 HUMAN 1 5.0197 14.331 KRFKGTESISKVSEQ-p Q00688;S77-p KRFKGTESISKVSEQ 0.0163284757072266 0.481867993631965 1.003 0.161333333333333 41.8871727787173 4.23326476934279 1.003 0.161333333333333 6.47564037413825e-05 0.377288461117474 11.0407396595358 0.961294066188302 Q00688 FKBP3 Q00688.S77.p_FKBP3 Q00688_S77s _1_1_77_77 Q00688 Q00688 Peptidyl-prolyl cis-trans isomerase FKBP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8101.8101.2 10.87 4.76 2.104 3 1 1 0 630.3364 1179.6985 S77s TMT10 74 (K) GTEsISK (V) GT(0.0)ES(0.99)IS(0.0)K K:TMT10,s:Phosphorylated S FKBP3 25233.4 2 4 1207.1 166.76 HUMAN 1 41.8872 4.2333 KRFKIPGSPPESMGR-p P50395;S61-p KRFKIPGSPPESMGR 0.380643803112374 0.0668436902563529 0.139333333333333 -0.222666666666667 7.75039068759623 15.6268018089688 0.139333333333333 -0.222666666666667 0.167865300114375 0.0273728374931338 1.59182791796237 -2.99480065998572 P50395 GDI2 P50395.S61.p_GDI2 P50395_S61s _1_1_61_61 P50395 P50395|P50395-2 Rab GDP dissociation inhibitor beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18263.18469.3 14.99 14.99 3.039 2 1 1 0 647.6736 1861.0406 S61s TMT10 56 (R) FKIPGsPPESMGR (G) FKIPGS(0.99)PPES(0.0)MGR K:TMT10,s:Phosphorylated S GDI2 51118.8 12 1 1810.1 113.37 HUMAN 1 7.7504 -15.6268 KRFPGYDSESKEFNA-p P46777;S185-p KRFPGYDSESKEFNA 0.518852766909706 0.269193749259233 -0.095 -0.108666666666667 5.26273804217072 7.5055926654062 -0.095 -0.108666666666667 0.29766391932027 0.177599088892863 -1.15199560599902 -1.54879668239331 P46777 RPL5 P46777.S185.p_RPL5 P46777_S185s _1_1_185_185 P46777 P46777 60S ribosomal protein L5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11573.11573.3 11.41 6.17 2.588 3 1 1 0 575.2867 1643.8793 S185s TMT10 179 (K) RFPGYDsESK (E) RFPGY(0.0)DS(0.99)ES(0.0)K K:TMT10,s:Phosphorylated S RPL5 34590.2 5 2 3573.1 47.97 HUMAN 1 -5.2627 -7.5056 KRGDGEKSDEENEEK-p O15318;S157-p KRGDGEKSDEENEEK 0.251274204758535 0.591244655148634 -0.659666666666667 -0.053 11.4463454900681 3.0882969150825 -0.659666666666667 -0.053 0.0716746285627396 0.491100423326463 -2.23449861513572 -0.738184669074832 O15318 POLR3G O15318.S157.p_POLR3G O15318_S157s _1_1_157_157 O15318 O15318 DNA-directed RNA polymerase III subunit RPC7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4803.4803.4 11.29 5.19 99 1 1 1 0 598.0428 2309.1824 S157s TMT10 151 (K) RGDGEKsDEENEEK (E) RGDGEKS(1.0)DEENEEK K:TMT10,s:Phosphorylated S POLR3G 25971.1 1 1 6505.1 11.29 HUMAN 1 -11.4463 -3.0883 KRGEDPPTPPPRPQK-p Q8NFH8-4;T478-p KRGEDPPTPPPRPQK 0.765494946141546 0.00602703466647687 0.0566666666666667 0.495 2.22957977969106 32.0635548118488 0.0566666666666666 0.495 0.598469499749878 0.000621791124815687 0.559064536381067 7.07313804990821 Q8NFH8 REPS2 Q8NFH8.4.T478.p_REPS2 Q8NFH8-4_T478t _1_1_478_478 Q8NFH8-4 Q8NFH8|Q8NFH8-4|Q8NFH8-2|Q8NFH8-3 Isoform 4 of RalBP1-associated Eps domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5759.5759.3 14.47 13.13 99 1 1 1 0 704.045 2030.1547 T478t TMT10 472 (K) RGEDPPtPPPRPQK (T) RGEDPPT(1.0)PPPRPQK K:TMT10,t:Phosphorylated T REPS2 71917.6 7 11 226.3 425.21 HUMAN 1 2.2296 32.0636 KRGEKDETEYEYSGS-p Q9UKE5;T319-p KRGEKDETEYEYSGS 0.364003673479539 0.00670130303311298 0.243 0.619666666666667 8.14384908895208 31.22896512826 0.243 0.619666666666667 0.153325747658783 0.000753535100732413 1.66010575058386 6.80356023178064 Q9UKE5 TNIK Q9UKE5.T319.p_TNIK Q9UKE5_T319t_1_1_319_319 Q9UKE5 Q9UKE5|Q9UKE5-4|Q9UKE5-2|Q9UKE5-6|Q9UKE5-3|Q9UKE5-7|Q9UKE5-5|Q9UKE5-8 TRAF2 and NCK-interacting protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17670.17670.5 12.38 10.9 1.167 10 1 1 0 1129.7499 5563.7494 T319t N343n TMT10 311 (K) KKRGEKDEtEYEYSGSEEEEEENDSGEPSSILnLPGESTLR (R) KKRGEKDET(0.99)EY(0.0)EY(0.0)S(0.0)GS(0.0)EEEEEEN(0.0)DS(0.0)GEPS(0.0)S(0.0)ILN(0.99)LPGES(0.0)T(0.0)LR K:TMT10,t:Phosphorylated T,n:Deamidated TNIK 155453.9 1 30 131.1 535.29 HUMAN 1 8.1438 31.229 KRGERRNSFSENEKH-p Q9HCG8;S829-p KRGERRNSFSENEKH 0.037433821034406 0.00700007098176202 -0.670666666666667 -0.474333333333333 32.5368762857279 30.8859771982378 -0.670666666666667 -0.474333333333333 0.000557586655513163 0.000815459281455558 -7.24267900733004 -6.6952519595057 Q9HCG8 CWC22 Q9HCG8.S829.p_CWC22 Q9HCG8_S829s _1_1_829_829 Q9HCG8 Q9HCG8 Pre-mRNA-splicing factor CWC22 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8769.8769.2 10.87 4.84 1.152 2 1 1 0 746.858 1412.7422 S829s TMT10 828 (R) NsFSENEK (H) NS(0.99)FS(0.0)ENEK K:TMT10,s:Phosphorylated S CWC22 106034.9 7 4 1128.1 174.64 HUMAN 1 -32.5369 -30.886 KRGFGFVTFDDHDPV-p P22626;T159-p KRGFGFVTFDDHDPV 0.948460261580024 0.124629313448907 -0.012 0.162333333333333 0.455883752320636 11.9281601823074 -0.012 0.162333333333333 0.900350530435465 0.0641481272102909 -0.13120867564833 2.31845000126556 P22626 HNRNPA2B1 P22626.T159.p_HNRNPA2B1 P22626_T159t _1_1_159_159 P22626 P22626 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25042.25042.3 17.55 11.9 99 1 1 1 0 745.3568 2154.0908 T159t TMT10 154 (R) GFGFVtFDDHDPVDK (I) GFGFVT(1.0)FDDHDPVDK K:TMT10,t:Phosphorylated T HNRNPA2B1 37486.1 1 4 299.1 378.08 HUMAN 1 -0.4559 11.9282 KRGKKMCSDGEKAEK-p Q01831;S515-p KRGKKMCSDGEKAEK 0.0360407965324359 0.634130584368556 0.758666666666667 0.0793333333333334 33.2490546335489 2.69033287876077 0.758666666666667 0.0793333333333334 0.000473254265108841 0.538228526705093 7.48488755766653 0.656694797330825 Q01831 XPC Q01831.S515.p_XPC Q01831_S515s _1_1_515_515 Q01831 Q01831 DNA repair protein complementing XP-C cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6342.6342.2 8.41 8.41 99 1 1 1 0 861.4313 1641.8907 S515s TMT10 512 (K) KMCsDGEK (A) KMCS(1.0)DGEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S XPC 106806.6 4 8 780.1 226.3 HUMAN 1 33.2491 2.6903 KRGKRPLSECQEGKV-p Q9H0K6;S293-p KRGKRPLSECQEGKV 0.0147380963983692 0.0232775963249443 -1.13133333333333 -0.632 43.7459587765265 22.2868136991714 -1.13133333333333 -0.632 4.22089085653923e-05 0.00590634253581861 -11.9828532355932 -4.38311313933485 Q9H0K6 PUS7L Q9H0K6.S293.p_PUS7L Q9H0K6_S293s _1_1_293_293 Q9H0K6 Q9H0K6|F8VZA0 Pseudouridylate synthase 7 homolog-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6590.6590.3 8.57 8.57 99 1 1 1 0 581.2961 1661.9045 S293s TMT10 290 (K) RPLsECQEGK (V) RPLS(1.0)ECQEGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PUS7L 81440.7 1 2 5239.1 21.44 HUMAN 1 -43.746 -22.2868 KRGLEELSLAQT___-p P51798;S801-p KRGLEELSLAQT___ 0.498264027312711 0.36386282693997 0.147 0.0983333333333334 5.57333792029281 5.82003014808557 0.147 0.0983333333333333 0.27711893925861 0.261816483323987 1.20816526504615 1.25214674490926 P51798 CLCN7 P51798.S801.p_CLCN7 P51798_S801s _1_1_801_801 P51798 P51798|P51798-2 H(+)/Cl(-) exchange transporter 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23450.23450.2 8.64 8.64 2.516 2 1 1 0 685.3459 1289.715 S801s TMT10 796 (R) GLEELsLAQT (-) GLEELS(0.99)LAQT(0.0) s:Phosphorylated S CLCN7 89191 1 5 2487.1 81.4 HUMAN 1 5.5733 5.82 KRGPDRGSPEYRQRR-p P49716;S191-p KRGPDRGSPEYRQRR 0.139286671509888 0.199349083320979 -0.437666666666667 -0.223666666666667 17.5294902679902 9.21494113796757 -0.437666666666667 -0.223666666666667 0.0176624511294427 0.119813536198826 -3.36766124749293 -1.84489570133265 P49716 CEBPD P49716.S191.p_CEBPD P49716_S191s _1_1_191_191 P49716 P49716 CCAAT/enhancer-binding protein delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3592.3592.3 7.32 3.46 7.325 2 1 1 0 533.5924 1518.7975 S191s TMT10 185 (K) RGPDRGsPEYR (Q) RGPDRGS(0.99)PEY(0.0)R s:Phosphorylated S CEBPD 28637.7 1 1 5211.1 21.75 HUMAN 1 -17.5295 -9.2149 KRGRATDSFSGRFED-p Q9HBH9;S74-p KRGRATDSFSGRFED 0.152207539398086 0.152026540057444 -0.291333333333333 0.181333333333333 16.4592551667037 10.7568362151301 -0.291333333333333 0.181333333333333 0.0225982330618642 0.0840071746174513 -3.15687628840036 2.1126332794842 Q9HBH9 MKNK2 Q9HBH9.S74.p_MKNK2 Q9HBH9_S74s _1_1_74_74 Q9HBH9 Q9HBH9|Q9HBH9-2 MAP kinase-interacting serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26976.26976.3 18.61 18.61 1.194 4 1 1 0 1102.8466 3226.5603 S74s TMT10 71 (R) ATDsFSGRFEDVYQLQEDVLGEGAHAR (V) AT(0.0)DS(0.99)FS(0.0)GRFEDVY(0.0)QLQEDVLGEGAHAR s:Phosphorylated S MKNK2 52786.8 3 1 2773.1 71.17 HUMAN 1 -16.4593 10.7568 KRGSSFQSGRDDTWR-p Q96KP1;S435-p KRGSSFQSGRDDTWR 0.0969394664773803 0.0948075906320177 0.417666666666667 0.218333333333333 21.500009628096 13.5304900657188 0.417666666666667 0.218333333333333 0.00707944214904737 0.0443558589156912 4.20852116441536 2.60561231446814 Q96KP1 EXOC2 Q96KP1.S435.p_EXOC2 Q96KP1_S435s _1_1_435_435 Q96KP1 Q96KP1 Exocyst complex component 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8378.8378.3 11.81 11.81 2.594 4 1 1 0 603.2705 1727.8299 S435s TMT10 430 (R) GSSFQsGRDDTWR (Y) GS(0.0)S(0.0)FQS(0.99)GRDDT(0.0)WR s:Phosphorylated S EXOC2 105148.4 2 3 2640.1 75.63 HUMAN 1 21.5 13.5305 KRHFNAPSHIRRKIM-p P61254;S23-p KRHFNAPSHIRRKIM 0.234787342649998 0.522541217851229 0.175333333333333 0.0736666666666667 12.0649894859725 3.78681030842351 0.175333333333333 0.0736666666666667 0.0621585752575184 0.418137356396164 2.34386721331192 0.876009712264463 P61254 RPL26 P61254.S23.p_RPL26 P61254_S23s _1_1_23_23 P61254 P61254|J3QQV1|J3QQQ9|J3KSS0 60S ribosomal protein L26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6776.6776.3 8.25 8.25 99 1 1 1 0 463.232 1307.717 S23s TMT10 18 (R) HFNAPsHIR (R) HFNAPS(1.0)HIR s:Phosphorylated S RPL26 17257.9 1 2 2947.1 65.03 HUMAN 1 12.065 3.7868 KRHFRRDSFDDRGPS-p A8MXP9;S188-p KRHFRRDSFDDRGPS 0.7281095523922 0.452734613054459 -0.0526666666666667 0.0766666666666667 2.61490853873981 4.5858972871513 -0.0526666666666667 0.0766666666666667 0.547657634364239 0.347864628608119 -0.641048524747389 1.02740042339706 A8MXP9 NotFound A8MXP9.S188.p_NotFound A8MXP9_S188s _1_1_188_188 A8MXP9 A8MXP9|P43243|D6REM6 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14900.14900.5 23.65 17.32 1.676 4 1 1 0 566.2672 2747.3335 S188s TMT10 186 (R) RDsFDDRGPSLNPVLDYDHGSR (S) RDS(0.99)FDDRGPS(0.0)LNPVLDY(0.0)DHGS(0.0)R s:Phosphorylated S MATR3 100478.9 6 13 92.1 615.57 HUMAN 1 -2.6149 4.5859 KRHGSSRSVVDMDLD-p O95071;S2486-p KRHGSSRSVVDMDLD 0.103816750749035 0.266273462673011 0.331 0.125333333333333 20.7761713012102 7.56695753985591 0.331 0.125333333333333 0.00836340002705273 0.175107297730198 4.04754074798321 1.55946931468695 O95071 UBR5 O95071.S2486.p_UBR5 O95071_S2486s _1_1_2486_2486 O95071 O95071|O95071-2|E7EMW7|E7ET84 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23766.23766.4 20.59 20.59 2.924 3 1 1 0 802.6078 3127.4364 S2486s Hydrogen 2486 (R) sVVDMDLDDTDDGDDNAPLFYQPGKR (G) S(0.99)VVDMDLDDT(0.0)DDGDDNAPLFY(0.0)QPGKR K:TMT10-Lys-Only,s:Phosphorylated S UBR5 312542 1 26 80.1 636.57 HUMAN 1 20.7762 7.567 KRHIRSHTGERPFQC-p P49711;T374-p KRHIRSHTGERPFQC 0.820901614327748 0.0238126241601899 -0.0346666666666667 -0.514666666666667 1.65251716967896 22.1300198472819 -0.0346666666666667 -0.514666666666667 0.683515367122929 0.00612347593286476 -0.430396208364739 -4.34709303405073 P49711 CTCF P49711.T374.p_CTCF P49711_T374t _1_1_374_374 P49711 P49711|P49711-2 Transcriptional repressor CTCF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10314.10314.3 15.04 9.73 1.137 6 1 1 0 818.03 2372.1073 T374t TMT10 372 (R) SHtGERPFQCSLCSYASR (D) S(0.0)HT(0.99)GERPFQCS(0.0)LCS(0.0)Y(0.0)AS(0.0)R C:Carbamidomethylation,t:Phosphorylated T CTCF 84324.5 2 3 1956.1 105.21 HUMAN 1 -1.6525 -22.13 KRHQLVHTGEKPFQC-p P25490;T348-p KRHQLVHTGEKPFQC 0.558156187420407 0.0170367523980032 -0.0913333333333333 -0.485 4.67722491204672 24.3997611804782 -0.0913333333333333 -0.485 0.340625775828382 0.00363098021063749 -1.04456136845516 -4.88743344932358 P25490 YY1 P25490.T348.p_YY1 P25490_T348t _1_1_348_348 P25490 P25490|O15391 Transcriptional repressor protein YY1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11684.11684.5 8.03 8.03 3.909 2 1 1 0 657.536 3203.681 T348t TMT10 342 (K) RHQLVHtGEKPFQCTFEGCGK (R) RHQLVHT(0.99)GEKPFQCT(0.0)FEGCGK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T YY1 45168.2 1 6 1217.1 165.22 HUMAN 1 -4.6772 -24.3998 KRHRIIHTGEKPYKC-p Q8N4W9;T870-p KRHRIIHTGEKPYKC 0.361131241199818 0.0038649686925988 -0.173666666666667 -0.775666666666667 8.22143222267697 35.6773102863328 -0.173666666666667 -0.775666666666667 0.150611029702807 0.000270563352386522 -1.67355289057682 -8.34692774166134 Q8N4W9 ZNF808 Q8N4W9.T870.p_ZNF808 Q8N4W9_T870t _1_1_870_870 Q8N4W9 A6NN14|Q05481|A0A0B4J2G0|Q8N4W9-2|Q05481-2|A0A0A0MS76|A0A087WYK5|A0A087WSW2|P17038|P17038-2|Q9UII5|Q6ZR52-2|A6NNF4|A0A0A0MR41|Q6ZNG1|Q9BRH9|O75437|Q96N22|P0DKX0|A8MTY0|A0A087WZJ7|O43309|A0A0G2JMG9|Q03923|A6NNF4-3|Q96N58|Q8N7Q3|Q03936|B4DXR9|A0A087WTY0|Q8TF32|A0A087X0A2|Q6ZN08|A6NK75|Q9H8G1|Q14593|Q8TD23|A0A0G2JP77|A0A075B7G6|Q9Y2Q1|Q96N22-2|F5H2M4|Q03923-2|Q03936-3|Q8IYN0|A0A087X1I5|O75373|A0A087WU35|Q96N38|Q49A12|Q9Y2Q1-2|Q9Y2Q1-3|Q68DY1|Q96JC4|Q96N38-2|Q03936-2|C9IZS8|Q9P255|Q9Y2Q1-4|A2RRD8|Q14593-2|P17019|A0A0A0MTN5|Q15928|Q96H40|Q68DY1-2|Q5JVG8|A0A087WTN2|Q5JVG8-2|P0CB33|Q8IYX0|Q96N38-3 Zinc finger protein 808 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11269.11269.4 12.66 12.66 12.661 2 1 1 0 489.0349 1873.1514 T870t TMT10 867 (R) IIHtGEKPYK (C) IIHT(0.99)GEKPY(0.0)K K:TMT10,t:Phosphorylated T ZNF808 108246.1 1 98 240.98 415.72 HUMAN 1 -8.2214 -35.6773 KRHSSHPSPAPVLPV-p Q8WXX7;S856-p KRHSSHPSPAPVLPV 0.386364653277442 0.870601104568923 0.366 -0.0276666666666666 7.643681633071 0.848332344386519 0.366 -0.0276666666666666 0.172040951844287 0.822558445088362 1.57328072861178 -0.235366466648954 Q8WXX7 AUTS2 Q8WXX7.S856.p_AUTS2 Q8WXX7_S856s _1_1_856_856 Q8WXX7 Q8WXX7|Q8WXX7-2|A0A087WVB5|Q8WXX7-5 Autism susceptibility gene 2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11690.11690.4 17.19 17.19 3.108 4 1 1 0 596.5622 2303.257 S856s TMT10 851 (R) HSSHPsPAPVLPVNALGHTR (S) HS(0.0)S(0.0)HPS(0.99)PAPVLPVNALGHT(0.0)R s:Phosphorylated S AUTS2 139379 3 5 684.1 243.98 HUMAN 1 7.6437 -0.8483 KRIAKRRSPPADAIP-p P18754-2;S11-p KRIAKRRSPPADAIP 0.427582140722397 0.0236422582721707 0.106 0.322 6.79458344621069 22.1767758649229 0.106 0.322 0.209190354252315 0.00605790437312227 1.42500602228572 4.35781484670796 P18754 RCC1 P18754.2.S11.p_RCC1 P18754-2_S11s _1_1_11_11 P18754-2 P18754-2 Isoform 2 of Regulator of chromosome condensation HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10782.11199.2 14.06 8.53 99 1 1 1 0 602.8124 1124.6513 S11s Hydrogen 11 (R) sPPADAIPK (S) S(1.0)PPADAIPK K:TMT10-Lys-Only,s:Phosphorylated S RCC1 48715.3 27 1 2680.1 74.17 HUMAN 1 6.7946 22.1768 KRILGSASPEEEQEK-p Q7Z422-5;S106-p KRILGSASPEEEQEK 0.149081489852703 0.0218702252717976 -0.376 -0.331333333333333 16.67025668676 22.6885427562866 -0.376 -0.331333333333333 0.0215265449980392 0.00538450425352509 -3.19796817674523 -4.47625704843478 Q7Z422 SZRD1 Q7Z422.5.S106.p_SZRD1 Q7Z422-5_S106s _1_1_106_106 Q7Z422-5 Q7Z422|Q7Z422-5|Q7Z422-3|Q7Z422-4|Q7Z422-2 Isoform 5 of SUZ domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16970.16970.4 16.38 16.38 1.236 3 1 1 0 726.6383 2823.5616 S106s TMT10 101 (R) ILGSAsPEEEQEKPILDRPTR (I) ILGS(0.0)AS(0.99)PEEEQEKPILDRPT(0.0)R K:TMT10,s:Phosphorylated S SZRD1 16909.7 11 5 1816.1 112.97 HUMAN 1 -16.6703 -22.6885 KRIPYAPSGEIPKFS-p O60701;S476-p KRIPYAPSGEIPKFS 0.625693782145375 0.464068440309145 -0.068 0.077 3.78304112150402 4.44594022820444 -0.068 0.0770000000000001 0.418500410045138 0.359257610663395 -0.875423707040381 1.00128419850727 O60701 UGDH O60701.S476.p_UGDH O60701_S476s _1_1_476_476 O60701 O60701|O60701-2|O60701-3 UDP-glucose 6-dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17596.17596.3 13.81 8.36 10.342 2 1 1 0 622.6818 1786.0627 S476s TMT10 470 (K) RIPYAPsGEIPK (F) RIPY(0.0)APS(0.99)GEIPK K:TMT10,s:Phosphorylated S UGDH 55707.7 1 2 4410.1 31.87 HUMAN 1 -3.783 4.4459 KRKAAVLSDSEDEEK-p Q96ST2;S398-p KRKAAVLSDSEDEEK 0.148266672319898 0.0460561715069429 -0.324333333333333 0.341 16.7567895597118 17.8854017346784 -0.324333333333333 0.341 0.0211018748992565 0.0162727078153042 -3.21488468477163 3.43631918808111 Q96ST2 IWS1 Q96ST2.S398.p_IWS1 Q96ST2_S398s _1_1_398_398 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13346.13346.2 16.65 16.65 1.508 2 1 1 0 915.9427 1750.9111 S398s TMT10 394 (K) AAVLsDSEDEEK (A) AAVLS(0.99)DS(0.0)EDEEK K:TMT10,s:Phosphorylated S IWS1 92010 2 5 230.1 422.87 HUMAN 1 -16.7568 17.8854 KRKADSDSEDKGEES-p P83916;S91-p KRKADSDSEDKGEES 0.591957101888505 0.505514040287491 0.087 0.0853333333333334 4.19627419262497 3.97061902265929 0.087 0.0853333333333334 0.380515700315147 0.400809584067471 0.954466536708071 0.911355705166052 P83916 CBX1 P83916.S91.p_CBX1 P83916_S89sS91s_2_2_89_91 P83916 P83916|K7ELA4 Chromobox protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7437.7437.4 12.12 12.12 6.606 3 2 2 0 764.6464 2895.6284 S89s S91s TMT10 86 (R) KADsDsEDKGEESKPK (K) KADS(0.99)DS(0.99)EDKGEES(0.0)KPK K:TMT10,s:Phosphorylated S CBX1 21531.5 11 6 1104.1 177.13 HUMAN 1 4.1963 3.9706 KRKADTTTPTTSAIT-p Q15059;T250-p KRKADTTTPTTSAIT 0.251097634730737 0.154246507870554 0.248333333333333 -0.151 11.4525672203162 10.6762505200533 0.248333333333333 -0.151 0.0715720205519953 0.0855805253206636 2.23559418407139 -2.0985689462044 Q15059 BRD3 Q15059.T250.p_BRD3 Q15059_T250t _1_1_250_250 Q15059 Q15059|Q15059-2 Bromodomain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8832.8832.3 13.81 10.55 1.414 8 1 1 0 720.7156 2080.165 T250t TMT10 245 (R) KADTTtPTTSAITASR (S) KADT(0.0)T(0.0)T(0.99)PT(0.0)T(0.0)S(0.0)AIT(0.0)AS(0.0)R K:TMT10,t:Phosphorylated T BRD3 79825.3 2 1 1315.1 154.93 HUMAN 1 11.4526 -10.6763 KRKAKAWSDCPQIIK-p Q6ZU35;S1226-p KRKAKAWSDCPQIIK 0.0552688318450056 0.0924312572626126 -0.487333333333333 0.272666666666667 27.4054553492599 13.6787573359002 -0.487333333333333 0.272666666666667 0.00181741649354515 0.0428671160237444 -5.679955545307 2.63258931664847 Q6ZU35 KIAA1211 Q6ZU35.S1226.p_KIAA1211 Q6ZU35_S1226s _1_1_1226_1226 Q6ZU35 Q6ZU35|F5H1N7 Uncharacterized protein KIAA1211 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21169.21169.3 13.91 13.91 99 1 1 1 0 585.9686 1675.9242 S1226s TMT10 1224 (K) AWsDCPQIIK (-) AWS(1.0)DCPQIIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIAA1211 137328.5 1 4 3080.1 61.27 HUMAN 1 -27.4055 13.6788 KRKARRNSAKGCENL-p Q7Z417;S230-p KRKARRNSAKGCENL 0.203650978120986 0.00995309608398391 1.626 -1.618 13.3902737364921 28.1360836760563 1.626 -1.618 0.0458113010869694 0.00153600147376907 2.5816357536287 -5.87590660246692 Q7Z417 NUFIP2 Q7Z417.S230.p_NUFIP2 Q7Z417_S230s _1_1_230_230 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10499.10499.4 19.64 13.86 99 1 1 1 0 596.8096 2304.2494 S230s Hydrogen 228 (R) RNsAKGCENLNIVQDK (I) RNS(1.0)AKGCENLNIVQDK K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S NUFIP2 76176.8 6 7 304.1 375.48 HUMAN 1 13.3903 -28.1361 KRKFAIGSAREADPA-p O96017-9;S303-p KRKFAIGSAREADPA 0.761210457736488 0.00234850053989814 0.0483333333333333 0.899333333333333 2.27350675383113 40.3997986858439 0.0483333333333333 0.899333333333333 0.592446754390116 9.12053115957506e-05 0.568554867205527 10.3126590378805 O96017 CHEK2 O96017.9.S303.p_CHEK2 O96017-9_S303s _1_1_303_303 O96017-9 O96017-9|O96017-12|O96017-4|O96017-7|O96017-13|O96017-8 Isoform 9 of Serine/threonine-protein kinase Chk2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31786.31786.5 21.22 21.22 10.18 2 1 1 0 677.1793 3301.8975 S303s TMT10 299 (K) FAIGsAREADPALNVETEIEILKK (L) FAIGS(0.99)AREADPALNVET(0.0)EIEILKK K:TMT10,s:Phosphorylated S CHEK2 66216.4 8 3 745.1 233.29 HUMAN 1 2.2735 40.3998 KRKGAILSEEELAAM-p P12270;S371-p KRKGAILSEEELAAM 0.641084758198557 0.814301701828603 0.066 0.0233333333333334 3.60542682969983 1.24874046622356 0.0645497961728984 0.0233333333333334 0.435970714182715 0.750111723968646 0.840912865679664 0.335124740489353 P12270 TPR P12270.S371.p_TPR P12270_S371s _1_1_371_371 P12270 P12270|P12270-2 Nucleoprotein TPR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28659.28659.3 20.52 20.52 8.798 3 1 1 0 856.7843 2488.3733 S371s TMT10 367 (K) GAILsEEELAAMSPTAAAVAK (I) GAILS(0.99)EEELAAMS(0.0)PT(0.0)AAAVAK K:TMT10,s:Phosphorylated S TPR 267687.4 1 2 385.1 333.55 HUMAN 1 3.6054 1.2487 KRKGKTDSPWIKPAR-p Q9H9B1;S435-p KRKGKTDSPWIKPAR 0.019376665224519 0.0260549775694185 0.818666666666667 0.742666666666667 40.0591007381621 21.5420929351885 0.818666666666667 0.742666666666667 9.86483728459668e-05 0.00701117337233593 10.1815533648698 4.21365905308023 Q9H9B1 EHMT1 Q9H9B1.S435.p_EHMT1 Q9H9B1_S435s _1_1_435_435 Q9H9B1 Q9H9B1|A0A1B0GV09|Q9H9B1-3|Q9H9B1-4 Histone-lysine N-methyltransferase EHMT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13857.13857.3 11.27 6.25 1.154 2 1 1 0 570.3118 1628.9524 S435s TMT10 433 (K) TDsPWIKPAR (K) T(0.0)DS(0.99)PWIKPAR K:TMT10,s:Phosphorylated S EHMT1 144088.3 4 3 1454.1 140.61 HUMAN 1 40.0591 21.5421 KRKGSDSSIPDEEKM-p Q15652;S320-p KRKGSDSSIPDEEKM 0.0332552830156115 0.00259997565261951 -1.25133333333333 -0.789666666666667 34.472078056456 39.3860438983288 -1.25133333333333 -0.789666666666667 0.000357101927499444 0.000115184916062828 -7.91691936807784 -9.85860986151696 Q15652 JMJD1C Q15652.S320.p_JMJD1C Q15652_S317sS320s_2_2_317_320 Q15652 Q15652|Q15652-3|A0A1W2PNZ9|Q15652-2 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7998.7998.4 9.51 9.51 2.429 3 2 2 0 574.5373 2135.1911 S317s S320s TMT10 314 (K) RKGsDSsIPDEEK (M) RKGS(0.99)DS(0.0)S(0.99)IPDEEK K:TMT10,s:Phosphorylated S JMJD1C 286573.8 4 19 377.1 336.35 HUMAN 1 -34.4721 -39.386 KRKIQHVTWP_____-p Q9BVC5;T230-p KRKIQHVTWP_____ 0.167853660719156 0.779416146863779 0.264666666666667 -0.0403333333333333 15.4782002566899 1.49952353643393 0.264666666666667 -0.0403333333333333 0.028325655853848 0.708023457228456 2.96862847126198 -0.39483411016815 Q9BVC5 C2orf49 Q9BVC5.T230.p_C2orf49 Q9BVC5_T230t _1_1_230_230 Q9BVC5 Q9BVC5|Q9BVC5-2|C9J4K0 Ashwin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20218.20218.2 13.56 13.56 99 1 1 1 0 595.302 1109.6305 T230t TMT10 226 (K) IQHVtWP (-) IQHVT(1.0)WP t:Phosphorylated T C2orf49 25915 5 7 1142.1 173.17 HUMAN 1 15.4782 -1.4995 KRKKQDSSDEDDDDD-p O14647;S208-p KRKKQDSSDEDDDDD 0.600746876542819 0.0113523621250542 0.0933333333333333 0.454 4.08775581764498 27.2287670364144 0.0933333333333333 0.454 0.390143538181834 0.00189288093194242 0.933867461099929 5.62347048913611 O14647 CHD2 O14647.S208.p_CHD2 O14647_S207sS208s_2_2_207_208 O14647 O14647|O14647-2|B7Z3I4|O14647-3|A0A0D9SGK0 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4577.4577.5 12.82 12.82 12.825 3 2 2 0 711.7426 3394.7492 S207s S208s TMT10 203 (R) KKQDssDEDDDDDEAPKRQTR (R) KKQDS(0.99)S(0.99)DEDDDDDEAPKRQT(0.0)R K:TMT10,s:Phosphorylated S CHD2 212309.6 14 13 482.1 298.11 HUMAN 1 4.0878 27.2288 KRKKSNISPNFNFMG-p Q16829;S369-p KRKKSNISPNFNFMG 0.77293343908683 0.333288220646353 -0.0403333333333333 -0.0956666666666667 2.13812723737961 6.32373855498894 -0.0403333333333333 -0.0956666666666667 0.611205531848533 0.233145020635255 -0.539178579488103 -1.34170102568924 Q16829 DUSP7 Q16829.S369.p_DUSP7 Q16829_S369s _1_1_369_369 Q16829 Q16829|Q99956|Q16828|Q16829-2|F8VW29|Q16828-2 Dual specificity protein phosphatase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36842.36842.3 18.64 18.64 1.644 2 1 1 0 813.3838 2358.175 S369s TMT10 366 (K) SNIsPNFNFMGQLLDFER (T) S(0.0)NIS(0.99)PNFNFMGQLLDFER s:Phosphorylated S DUSP7 45526.2 5 2 3410.1 51.75 HUMAN 1 -2.1381 -6.3237 KRKLIVDSVKELDSK-p O60216;S328-p KRKLIVDSVKELDSK 0.376518154999368 0.0118634826297909 -0.167666666666667 0.586666666666667 7.84435558615605 26.9152088417677 -0.167666666666667 0.586666666666667 0.164272339179776 0.00203460035446203 -1.60814837566798 5.53816209113311 O60216 RAD21 O60216.S328.p_RAD21 O60216_S328s _1_1_328_328 O60216 O60216 Double-strand-break repair protein rad21 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19700.19700.2 8.53 5.59 99 1 1 1 0 656.3886 1231.8026 S328s TMT10 324 (K) LIVDsVK (E) LIVDS(1.0)VK K:TMT10,s:Phosphorylated S RAD21 71973.5 1 3 1167.1 170.49 HUMAN 1 -7.8444 26.9152 KRKLLSASEEDENMG-p Q6RI45;S1579-p KRKLLSASEEDENMG 0.336567365649784 0.0126876261348301 -0.279666666666667 0.386333333333333 8.81468775877695 26.4408891341572 -0.279666666666667 0.386333333333333 0.131380594921797 0.00226940018841815 -1.77628501562126 5.41094632998375 Q6RI45 BRWD3 Q6RI45.S1579.p_BRWD3 Q6RI45_S1579s _1_1_1579_1579 Q6RI45 Q6RI45|Q6RI45-2|Q6RI45-4|Q6RI45-3 Bromodomain and WD repeat-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18340.18340.3 16.43 14.39 1.808 2 1 1 0 754.6806 2182.0586 S1579s TMT10 1575 (K) LLSAsEEDENMGGEDK (E) LLS(0.0)AS(0.99)EEDENMGGEDK K:TMT10,s:Phosphorylated S BRWD3 205362.6 1 5 1905.1 108.09 HUMAN 1 -8.8147 26.4409 KRKNAIASDSEADSD-p Q8WVC0;S294-p KRKNAIASDSEADSD 0.145835187369471 0.0206907854655544 -0.511666666666667 0.417333333333333 17.0317744128327 23.0415940807811 -0.511666666666667 0.417333333333334 0.0198071759143623 0.0049641008035674 -3.26889566830334 4.55914896484008 Q8WVC0 LEO1 Q8WVC0.S294.p_LEO1 Q8WVC0_S294sS296sS300s_3_3_294_300 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17433.17433.2 13.8 9.91 2.119 4 3 3 0 1224.012 2207.108 S294s S296s S300s TMT10 290 (K) NAIAsDsEADsDTEVPK (D) NAIAS(0.99)DS(0.99)EADS(0.99)DT(0.0)EVPK K:TMT10,s:Phosphorylated S LEO1 75516.9 7 23 514.1 286.88 HUMAN 1 -17.0318 23.0416 KRKNKPLSDMELNSS-p O15014;S446-p KRKNKPLSDMELNSS 0.949207015586855 0.831870513320841 -0.01 0.0266666666666667 0.448847676902301 1.11940521544159 -0.01 0.0266666666666667 0.90181038519683 0.772786414198256 -0.129273672880788 0.303537090161169 O15014 ZNF609 O15014.S446.p_ZNF609 O15014_S446s _1_1_446_446 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15517.15517.3 15.16 15.16 1.353 5 1 1 0 883.4412 2568.343 S446s TMT10 442 (K) NKPLsDMELNSSSEDSK (G) NKPLS(0.99)DMELNS(0.0)S(0.0)S(0.0)EDS(0.0)K K:TMT10,s:Phosphorylated S ZNF609 152443.5 2 8 63.1 699.07 HUMAN 1 -0.4488 1.1194 KRKPEEESPRKDDAK-p P49321-3;S728-p KRKPEEESPRKDDAK 0.874041515701776 0.0226469914874281 0.0243333333333333 -0.585333333333333 1.14394286280371 22.4640734023248 0.0243333333333333 -0.585333333333333 0.768432480781476 0.00567012534711597 0.309605198677265 -4.42405947804763 P49321 NASP P49321.3.S728.p_NASP P49321-3_S728s _1_1_728_728 P49321-3 P49321-3|P49321-4|P49321-2|Q5T624 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4113.4113.3 12.17 12.17 99 1 1 1 0 885.1606 2573.5069 S728s Hydrogen 723 (R) KPEEEsPRKDDAKK (A) KPEEES(1.0)PRKDDAKK K:TMT10-Lys-Only,s:Phosphorylated S NASP 86552 37 26 87.1 626.46 HUMAN 1 1.1439 -22.4641 KRKQHYLSSEDEPDD-p Q8NFC6;S2779-p KRKQHYLSSEDEPDD 0.451712086772319 0.857382052214102 0.171333333333333 0.0226666666666667 6.37334902307071 0.942159114017026 0.171333333333333 0.0226666666666667 0.230496904693529 0.804978143296691 1.3508108304408 0.25928070742671 Q8NFC6 BOD1L1 Q8NFC6.S2779.p_BOD1L1 Q8NFC6_S2779sS2780s_2_2_2779_2780 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.16921.17134.2 21.09 21.09 5.566 4 2 2 0 1237.4525 2331.0008 Q2775q S2779s S2780s Hydrogen 2775 (K) qHYLssEDEPDDNPDVLDSR (I) Q(1.0)HY(0.0)LS(0.99)S(0.99)EDEPDDNPDVLDS(0.0)R q:Pyroglutamic acid,s:Phosphorylated S BOD1L1 332628.7 11 29 97.1 603.4 HUMAN 1 6.3733 0.9422 KRKREEGSDIEDEDM-p Q8NHQ9;S544-p KRKREEGSDIEDEDM 0.869521280017076 0.12074667954588 0.0263333333333333 0.212666666666667 1.186084784236 12.1039576434856 0.0263333333333333 0.212666666666667 0.761012029069539 0.0616033366439252 0.319925836179124 2.3496031062631 Q8NHQ9 DDX55 Q8NHQ9.S544.p_DDX55 Q8NHQ9_S544s _1_1_544_544 Q8NHQ9 Q8NHQ9|F5H5U2|Q8NHQ9-2 ATP-dependent RNA helicase DDX55 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19267.19267.4 25.12 24.37 18.192 2 1 1 0 708.8185 2752.2781 S544s Hydrogen 539 (R) KREEGsDIEDEDMEELLNDTR (L) KREEGS(0.99)DIEDEDMEELLNDT(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S DDX55 69116.1 25 2 1773.1 116.04 HUMAN 1 1.1861 12.104 KRKRESESESDETPP-p O60832;S453-p KRKRESESESDETPP 0.663377338382 0.0259210237700486 0.062 0.316666666666667 3.33487406623789 21.5705276069006 0.062 0.316666666666667 0.463994244376791 0.00696541888897599 0.787645632368431 4.22005414492145 O60832 DKC1 O60832.S453.p_DKC1 O60832_S451sS453sS455s_3_3_451_455 O60832 O60832 H/ACA ribonucleoprotein complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13439.13439.4 11.93 11.93 2.203 4 3 3 0 856.6787 3183.7941 S451s S453s S455s Hydrogen 447 (K) RKREsEsEsDETPPAAPQLIKK (E) RKRES(0.99)ES(0.99)ES(0.99)DET(0.0)PPAAPQLIKK K:TMT10-Lys-Only,s:Phosphorylated S DKC1 58129.5 74 10 363.1 342.61 HUMAN 1 3.3349 21.5705 KRKRKVFSPIRSEPR-p Q03164-3;S742-p KRKRKVFSPIRSEPR 0.376746768297789 0.0106636622659309 -0.199333333333333 -0.450333333333333 7.83847611130568 27.653428501343 -0.199333333333333 -0.450333333333333 0.164494881531926 0.00171655273397232 -1.60712748781756 -5.74057418128365 Q03164 KMT2A Q03164.3.S742.p_KMT2A Q03164-3_S742s _1_1_742_742 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13338.13338.3 7.32 3.1 2.219 2 1 1 0 499.5986 1416.8161 S742s TMT10 740 (K) VFsPIRSEPR (S) VFS(0.99)PIRS(0.0)EPR s:Phosphorylated S KMT2A 436608.3 3 14 26.1 936.8 HUMAN 1 -7.8385 -27.6534 KRKSHSLSIRRTNSS-p Q9Y2I8-2;S24-p KRKSHSLSIRRTNSS 0.144621219145243 0.380800619074585 0.249666666666667 0.0873333333333334 17.144589371148 5.57063456739323 0.249666666666667 0.0873333333333334 0.0192992780375663 0.277291491185789 3.29116738256661 1.20741025757276 Q9Y2I8 WDR37 Q9Y2I8.2.S24.p_WDR37 Q9Y2I8-2_S24s _1_1_24_24 Q9Y2I8-2 Q9Y2I8-2|Q9Y2I8-3|A0A087WTQ2 Isoform 2 of WD repeat-containing protein 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5920.5920.2 7.6 7.6 7.595 3 1 1 0 554.7899 1028.605 S24s TMT10 20 (K) SHSLsIR (R) S(0.0)HS(0.0)LS(0.99)IR s:Phosphorylated S WDR37 55477.2 1 2 2625.1 76.51 HUMAN 1 17.1446 5.5706 KRKSLSDSESDDSKS-p Q13185;S97-p KRKSLSDSESDDSKS 0.0897340370396671 0.138041953509144 0.4425 -0.173833333333333 22.3020181767776 11.333111033197 0.4425 -0.173833333333333 0.00588570081879719 0.073567991037417 4.39133696260818 -2.21354077108535 Q13185 CBX3 Q13185.S97.p_CBX3 Q13185_S97sS99s_2_2_97_99 Q13185 Q13185 Chromobox protein homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10597.10597.3 11.12 11.12 3.023 5 2 2 0 596.5859 1627.8063 S97s S99s TMT10 93 (K) SLSDsEsDDSK (S) S(0.0)LS(0.0)DS(0.99)ES(0.99)DDS(0.0)K K:TMT10,s:Phosphorylated S CBX3 20982.2 3 15 1104.2 177.13 HUMAN 2 22.302 -11.3331 KRKTRSLSVEIVYEG-p Q9NS56;S866-p KRKTRSLSVEIVYEG 0.839145106122672 0.313627809581638 -0.0293333333333333 -0.103666666666667 1.47471729967966 6.65733116032586 -0.0293333333333333 -0.103666666666667 0.712079150680744 0.215907080032438 -0.389054287715369 -1.40051905640163 Q9NS56 TOPORS Q9NS56.S866.p_TOPORS Q9NS56_S864sS866s_2_2_864_866 Q9NS56 Q9NS56|Q9NS56-2 E3 ubiquitin-protein ligase Topors HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26625.26625.3 12.05 12.05 7.122 3 2 2 0 614.6417 1681.9777 S864s S866s TMT10 864 (R) sLsVEIVYEGK (A) S(0.99)LS(0.99)VEIVY(0.0)EGK K:TMT10,s:Phosphorylated S TOPORS 120222.5 9 13 580.1 266.48 HUMAN 1 -1.4747 -6.6573 KRKTWVVSPAEKAKY-p P42566;S221-p KRKTWVVSPAEKAKY 0.115295327043972 0.0646698085777866 -0.348 -0.25 19.5330306930931 15.8281489206751 -0.348 -0.25 0.0111351720235127 0.0261327496479382 -3.77944268088609 -3.03314743629256 P42566 EPS15 P42566.S221.p_EPS15 P42566_S221s _1_1_221_221 P42566 P42566|B1AUU8 Epidermal growth factor receptor substrate 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18737.18737.2 11.29 11.29 5.384 2 1 1 0 777.9207 1474.867 S221s TMT10 217 (K) TWVVsPAEK (A) T(0.0)WVVS(0.99)PAEK K:TMT10,s:Phosphorylated S EPS15 99281.5 2 4 342.1 353.17 HUMAN 1 -19.533 -15.8281 KRKVRTRSLSDFTGP-p O95425-3;S520-p KRKVRTRSLSDFTGP 0.902776256738348 0.0284826261184994 -0.0226666666666667 0.354333333333333 0.873098188994708 20.933275388036 -0.0226666666666667 0.354333333333333 0.817881116355724 0.00806626454435842 -0.241736354177022 4.07812055800759 O95425 SVIL O95425.3.S520.p_SVIL O95425-3_S520s _1_1_520_520 O95425-3 O95425|O95425-3|O95425-4 Isoform SV3 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28795.28795.3 9.82 9.82 1.142 3 1 1 0 714.0533 2060.1792 S520s TMT10 520 (R) sLSDFTGPPQLQALK (Y) S(0.99)LS(0.0)DFT(0.0)GPPQLQALK K:TMT10,s:Phosphorylated S SVIL 246500.4 2 23 406.1 324.74 HUMAN 1 -0.8731 20.9333 KRKYQEDSDPERSDY-p Q6P6C2;S64-p KRKYQEDSDPERSDY 0.780774653521955 0.0247306909052002 -0.0466666666666667 0.309666666666667 2.06630296873612 21.8698857103732 -0.0466666666666667 0.309666666666667 0.621397788243157 0.00650146799484579 -0.523435750600349 4.2877391373044 Q6P6C2 ALKBH5 Q6P6C2.S64.p_ALKBH5 Q6P6C2_S64s _1_1_64_64 Q6P6C2 Q6P6C2-1|Q6P6C2-3 RNA demethylase ALKBH5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9234.9234.4 18.96 14.69 2.362 4 1 1 0 764.1094 2973.4478 S64s Hydrogen 59 (R) KYQEDsDPERSDYEEQQLQK (E) KY(0.0)QEDS(0.99)DPERS(0.0)DY(0.0)EEQQLQK K:TMT10-Lys-Only,s:Phosphorylated S ALKBH5 44597.5 10 1 578.1 267.46 HUMAN 1 -2.0663 21.8699 KRLEKSPSFASEWDE-p Q92625;S663-p KRLEKSPSFASEWDE 0.233874285511717 0.840412671405299 -0.187333333333333 -0.0276666666666667 12.0971818370624 1.06150220056236 -0.187333333333333 -0.0276666666666667 0.0616995243901584 0.783158705651814 -2.34958385507979 -0.289206518461626 Q92625 ANKS1A Q92625.S663.p_ANKS1A Q92625_S663s _1_1_663_663 Q92625 Q92625 Ankyrin repeat and SAM domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25696.25902.3 16.4 16.4 1.173 3 1 1 0 688.3305 1983.0111 S663s TMT10 661 (K) SPsFASEWDEIEK (I) S(0.0)PS(0.99)FAS(0.0)EWDEIEK K:TMT10,s:Phosphorylated S ANKS1A 124075.6 5 9 709.1 238.85 HUMAN 1 -12.0972 -1.0615 KRLHKRDSFDNCSLG-p Q5UIP0;S1688-p KRLHKRDSFDNCSLG 0.25601592202215 0.258912122637804 -0.194333333333333 -0.170333333333333 11.2433382274218 7.7315222964906 -0.194333333333333 -0.170333333333333 0.0751045377103926 0.16859619555178 -2.19879621122437 -1.5880637808222 Q5UIP0 RIF1 Q5UIP0.S1688.p_RIF1 Q5UIP0_S1688s _1_1_1688_1688 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10250.10250.3 15.85 15.85 4.653 4 1 1 0 713.9982 2060.0119 S1688s TMT10 1686 (K) RDsFDNCSLGESSK (I) RDS(0.99)FDNCS(0.0)LGES(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RIF1 276628.8 7 21 29.1 922.06 HUMAN 1 -11.2433 -7.7315 KRLHRIETDEEESCD-p Q96T23;T1305-p KRLHRIETDEEESCD 0.90552186362789 0.065139446747308 0.0196666666666667 0.258666666666667 0.84618455745925 15.7833267491141 0.0196666666666667 0.258666666666667 0.82296533886055 0.0264038541478538 0.234837574821599 3.02459502855119 Q96T23 RSF1 Q96T23.T1305.p_RSF1 Q96T23_T1305t _1_1_1305_1305 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5691.5691.4 32.84 30.63 8.131 3 1 1 0 813.3448 3170.3878 T1305t TMT10 1303 (R) IEtDEEESCDNAHGDANQPARDSQPR (V) IET(0.99)DEEES(0.0)CDNAHGDANQPARDS(0.0)QPR C:Carbamidomethylation,t:Phosphorylated T RSF1 165358.1 12 19 39.1 857.38 HUMAN 1 0.8462 15.7833 KRLIDLHSPSEIVKQ-p P60866-2;S93-p KRLIDLHSPSEIVKQ 0.139932386670141 0.018662450602294 0.33 -0.500666666666667 17.4730911359713 23.7898475055029 0.33 -0.500666666666667 0.0178933182522197 0.00417845038246875 3.35640296236819 -4.73812421063864 P60866 RPS20 P60866.2.S93.p_RPS20 P60866-2_S93s _1_1_93_93 P60866-2 P60866-2|G3XAN0 Isoform 2 of 40S ribosomal protein S20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23033.23033.3 18.18 18.18 3.074 2 1 1 0 630.3564 1809.0886 S93s TMT10 88 (R) LIDLHsPSEIVK (Q) LIDLHS(0.99)PS(0.0)EIVK K:TMT10,s:Phosphorylated S RPS20 16176.5 1 4 2861.1 67.94 HUMAN 1 17.4731 -23.7898 KRLIGRRYDDPEVQK-p P38646;Y128-p KRLIGRRYDDPEVQK 0.599357582763018 0.0997115990450692 -0.246666666666667 0.348666666666667 4.10703740795096 13.2341216732019 -0.246666666666667 0.348666666666667 0.388415237764283 0.0474884322889746 -0.937535381959785 2.55191084050649 P38646 HSPA9 P38646.Y128.p_HSPA9 P38646_Y128y _1_1_128_128 P38646 P38646 Stress-70 protein, mitochondrial GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8079.8079.3 15.35 9.23 99 1 1 1 0 633.3293 1818.0071 Y128y Hydrogen 123 (R) LIGRRyDDPEVQK (D) LIGRRY(1.0)DDPEVQK K:TMT10-Lys-Only,y:Phosphorylated Y HSPA9 73964.5 3 1 134.1 23.98 HUMAN 1 -4.107 13.2341 KRLTRWGSQGNRTPS-p Q9H4E7;S590-p KRLTRWGSQGNRTPS 0.366658171951878 0.132411490459811 -0.169666666666667 -0.315 8.08823432112987 11.5735078322948 -0.169666666666667 -0.315 0.15530182807499 0.0696064070314366 -1.65046352966888 -2.25582823839701 Q9H4E7 DEF6 Q9H4E7.S590.p_DEF6 Q9H4E7_S590s _1_1_590_590 Q9H4E7 Q9H4E7 Differentially expressed in FDCP 6 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8132.8132.3 15.63 15.63 2.16 4 1 1 0 851.7465 2473.2584 S590s TMT10 588 (R) WGsQGNRTPSPNSNEQQK (S) WGS(0.99)QGNRT(0.0)PS(0.0)PNS(0.0)NEQQK K:TMT10,s:Phosphorylated S DEF6 74479.6 3 1 4302.1 34.02 HUMAN 1 -8.0882 -11.5735 KRLVLSESCSRDSMS-p A6NHB5;S1049-p KRLVLSESCSRDSMS 0.357785021065989 0.815377744014796 -0.136333333333333 0.0243333333333334 8.29737686973722 1.23983507247787 -0.136333333333333 0.0243333333333334 0.148000203662492 0.751651438165206 -1.68671216263014 0.332967872668552 A6NHB5 NotFound A6NHB5.S1049.p_NotFound A6NHB5_S1049s _1_1_1049_1049 A6NHB5 A6NHB5|Q14202|Q14202-2 Zinc finger MYM-type protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9793.9793.3 10.32 10.32 1.102 3 1 1 0 505.9233 1435.7889 S1049s TMT10 1043 (K) RLVLSEsCSR (D) RLVLS(0.0)ES(0.99)CS(0.0)R C:Carbamidomethylation,s:Phosphorylated S ZMYM3 156426.3 6 13 331.1 357.99 HUMAN 1 -8.2974 1.2398 KRLWTQASPEFGQAT-p A0A0A0MT35;S143-p KRLWTQASPEFGQAT 0.525094535747024 0.0878516378867776 0.0873333333333333 -0.233 5.17725121842164 13.9832594031479 0.0873333333333333 -0.233 0.303581203381705 0.0399644701710585 1.13644332534664 -2.68823512271435 A0A0A0MT35 FAM213B A0A0A0MT35.S143.p_FAM213B A0A0A0MT35_S143s _1_1_143_143 A0A0A0MT35 A0A0A0MT35 Prostamide/prostaglandin F synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30099.30099.3 12.26 12.26 3.675 3 1 1 0 787.3773 2280.1433 S143s TMT10 138 (R) LWTQAsPEFGQATWCLR (R) LWT(0.0)QAS(0.99)PEFGQAT(0.0)WCLR C:Carbamidomethylation,s:Phosphorylated S FAM213B 26809.1 1 1 6340.1 12.26 HUMAN 1 5.1773 -13.9833 KRMKKELSPAGSISK-p O95453;S619-p KRMKKELSPAGSISK 0.852863951293609 0.396924427184974 -0.0283333333333333 0.104 1.33877777986343 5.33515138484142 -0.0283333333333334 0.104 0.734720608977718 0.292741882665617 -0.356823799925301 1.16488804755031 O95453 PARN O95453.S619.p_PARN O95453_S619s _1_1_619_619 O95453 O95453|O95453-3|O95453-2|O95453-4 Poly(A)-specific ribonuclease PARN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14652.14652.2 15.23 10.44 3.826 3 1 1 0 763.9154 1446.8568 S619s TMT10 617 (K) ELsPAGSISK (N) ELS(0.99)PAGS(0.0)IS(0.0)K K:TMT10,s:Phosphorylated S PARN 73963.1 9 8 320.1 365.2 HUMAN 1 -1.3388 5.3352 KRNEDEDSPNKLYTL-p P62899-2;S98-p KRNEDEDSPNKLYTL 0.0869330223051714 0.0392872253413521 0.951666666666667 -0.594333333333333 22.6176620877266 18.8682795924483 0.951666666666667 -0.594333333333333 0.00547310514096722 0.0129769323540019 4.46462023610778 -3.6370098765938 P62899 RPL31 P62899.2.S98.p_RPL31 P62899-2_S98s _1_1_98_98 P62899-2 B7Z4C8|P62899-2|P62899-3|B7Z4E3 Isoform 2 of 60S ribosomal protein L31 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28858.28858.5 20.43 20.43 5.451 7 1 1 0 791.6362 3874.1772 S98s TMT10 91 (R) KRNEDEDsPNKLYTLVTYVPVTTFK (I) KRNEDEDS(0.99)PNKLY(0.0)T(0.0)LVT(0.0)Y(0.0)VPVT(0.0)T(0.0)FK K:TMT10,s:Phosphorylated S RPL31 14632 9 2 2041.1 101.13 HUMAN 1 22.6177 -18.8683 KRNFKGLSPVKEPKL-p Q8TC05;S242-p KRNFKGLSPVKEPKL 0.689535041062173 0.00375553060202295 0.062 -0.715666666666667 3.02558786457297 35.973543723206 0.062 -0.715666666666667 0.498243008823428 0.00025272350008203 0.72560470692767 -8.45960763837611 Q8TC05 MDM1 Q8TC05.S242.p_MDM1 Q8TC05_S242s _1_1_242_242 Q8TC05 Q8TC05|Q8TC05-4 Nuclear protein MDM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13119.13119.3 10.83 5.37 99 1 1 1 0 574.6777 1642.0507 S242s TMT10 240 (K) GLsPVKEPK (L) GLS(1.0)PVKEPK K:TMT10,s:Phosphorylated S MDM1 81019 2 2 1888.1 108.98 HUMAN 1 3.0256 -35.9735 KRNISKLSPPRIFQT-p Q6P0N0;S365-p KRNISKLSPPRIFQT 0.853274388979854 0.00854565817657389 0.033 -0.529333333333333 1.33521105945818 29.3494203257435 0.033 -0.529333333333334 0.735324259145006 0.00116160364845937 0.355970500930668 -6.22701006077704 Q6P0N0 MIS18BP1 Q6P0N0.S365.p_MIS18BP1 Q6P0N0_S365s _1_1_365_365 Q6P0N0 Q6P0N0|G5E9K5|Q6P0N0-2 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26502.26709.5 12.5 8.24 2.081 4 1 1 0 648.3915 3157.9595 S365s TMT10 360 (R) NISKLsPPRIFQTVTNGLKK (N) NIS(0.0)KLS(0.99)PPRIFQT(0.0)VT(0.0)NGLKK K:TMT10,s:Phosphorylated S MIS18BP1 129996 7 16 54.1 728.39 HUMAN 1 1.3352 -29.3494 KRNKGKYSPTVQTRS-p O60437;S14-p KRNKGKYSPTVQTRS 0.572719143373661 0.903861965963361 0.0766666666666667 -0.0136666666666667 4.45519151349782 0.61190844242662 0.0766666666666667 -0.0136666666666667 0.358493139236442 0.868578661453242 1.00319968326742 -0.173464312484643 O60437 PPL O60437.S14.p_PPL O60437_S14s _1_1_14_14 O60437 O60437|K7EKI8 Periplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7320.7320.2 11.14 11.14 1.41 4 1 1 0 837.955 1594.9317 S14s TMT10 11 (K) GKYsPTVQTR (S) GKY(0.0)S(0.99)PT(0.0)VQT(0.0)R K:TMT10,s:Phosphorylated S PPL 205313.7 5 1 2268.1 90.52 HUMAN 1 4.4552 -0.6119 KRNSERKTPEGRASP-p O94826;T85-p KRNSERKTPEGRASP 0.171158122502722 0.0304698237240543 0.254666666666667 0.275333333333333 15.2802621977462 20.4926671244249 0.254666666666667 0.275333333333333 0.0296465239838475 0.00892757048161111 2.93118173265883 3.9816453777567 O94826 TOMM70A O94826.T85.p_TOMM70A O94826_T85t _1_1_85_85 O94826 O94826 Mitochondrial import receptor subunit TOM70 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3137.3137.4 11.41 7.55 4.018 2 1 1 0 428.7279 1631.9229 T85t TMT10 80 (R) NSERKtPEGR (A) NS(0.0)ERKT(0.99)PEGR K:TMT10,t:Phosphorylated T TOMM70 68138.3 18 2 776.1 227.2 HUMAN 1 15.2803 20.4927 KRPATADSPKPSAKK-p Q03111;S292-p KRPATADSPKPSAKK 0.571358919570234 0.168929400640722 -0.112 0.138666666666667 4.47599426028997 10.1583464428281 -0.112 0.138666666666667 0.35678005981487 0.0964196067163637 -1.00709111386968 2.0084078515767 Q03111 MLLT1 Q03111.S292.p_MLLT1 Q03111_S292s _1_1_292_292 Q03111 Q03111 Protein ENL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5257.5257.4 12.66 12.66 1.466 3 1 1 0 613.3631 2370.4639 S292s TMT10 286 (K) RPATADsPKPSAKK (Q) RPAT(0.0)ADS(0.99)PKPS(0.0)AKK K:TMT10,s:Phosphorylated S MLLT1 62454.4 11 3 685.1 243.68 HUMAN 1 -4.476 10.1583 KRPGYGAYDAFKHAV-p P05198;Y150-p KRPGYGAYDAFKHAV 0.879949471081058 0.366751519192635 -0.0886666666666667 -0.155 1.0919811582432 5.7775748513773 -0.0886666666666667 -0.155 0.777681708400907 0.264388471977902 -0.296794411953124 -1.24455133017867 P05198 EIF2S1 P05198.Y150.p_EIF2S1 P05198_Y150y _1_1_150_150 P05198 P05198 Eukaryotic translation initiation factor 2 subunit 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.14726.14726.4 14.79 7.84 4.578 3 1 1 0 576.5613 2223.2529 Y150y TMT10 142 (K) YKRPGYGAyDAFK (H) Y(0.0)KRPGY(0.0)GAY(0.99)DAFK K:TMT10,y:Phosphorylated Y EIF2S1 36396.8 1 1 242.1 14.79 HUMAN 1 -1.092 -5.7776 KRPIAIKSPKDKWQP-p O95714;S1601-p KRPIAIKSPKDKWQP 0.0608497647854506 0.0135184331227 -0.527333333333333 -0.467 26.5658253693277 25.9803835355059 -0.527333333333333 -0.467 0.00220504503148499 0.0025232579278947 -5.45160003214857 -5.28949861604592 O95714 HERC2 O95714.S1601.p_HERC2 O95714_S1588sS1601s_2_2_1588_1601 O95714 O95714|Q9BVR0 E3 ubiquitin-protein ligase HERC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23451.23451.5 18.34 18.34 13.218 3 2 2 0 930.0957 4486.5149 S1588s S1601s TMT10 1572 (K) IGNEESDLEEACILPHsPINVDKRPIAIKsPK (D) IGNEES(0.0)DLEEACILPHS(0.99)PINVDKRPIAIKS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HERC2 533836.7 4 8 552.1 274.16 HUMAN 1 -26.5658 -25.9804 KRPKISFSNIISDMK-p Q92665;S202-p KRPKISFSNIISDMK 0.261948147009626 0.0805685607186902 0.170666666666667 0.208 11.0301601205126 14.5074169942856 0.170666666666667 0.208 0.0788831033583831 0.0354207946827685 2.16139398584994 2.78482269860105 Q92665 MRPS31 Q92665.S202.p_MRPS31 Q92665_S202s _1_1_202_202 Q92665 Q92665 28S ribosomal protein S31, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36012.36012.3 12.85 12.85 2.304 3 1 1 0 598.3146 1712.9657 S202s TMT10 199 (K) ISFsNIISDMK (V) IS(0.0)FS(0.99)NIIS(0.0)DMK K:TMT10,s:Phosphorylated S MRPS31 45431.8 4 4 2669.1 74.39 HUMAN 1 11.0302 14.5074 KRPLEEGSNGHSKYR-p P78563;S59-p KRPLEEGSNGHSKYR 0.319991630816832 0.0949906541206792 0.179333333333333 0.201666666666667 9.26333535688679 13.519164056383 0.179333333333333 0.201666666666667 0.118485843412458 0.0444716859724933 1.85395753305685 2.60355466173865 P78563 ADARB1 P78563.S59.p_ADARB1 P78563_S59s_1_1_59_59 P78563 P78563-5|P78563-4|P78563-3 Double-stranded RNA-specific editase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5382.5382.4 7.02 7.02 7.016 2 1 1 0 552.549 2126.2285 S59s N60n TMT10 52 (R) KRPLEEGsnGHSK (Y) KRPLEEGS(0.99)N(1.0)GHS(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated ADARB1 81161.3 1 3 2835.1 68.55 HUMAN 1 9.2633 13.5192 KRPLPVESPDTQRKR-p P57682;S250-p KRPLPVESPDTQRKR 0.188778224113783 0.115633496300883 -0.313666666666667 0.222 14.1848581372807 12.3590879029916 -0.313666666666667 0.222 0.0381517256374574 0.0580886401368326 -2.7269223104363 2.39495623922316 P57682 KLF3 P57682.S250.p_KLF3 P57682_S250s _1_1_250_250 P57682 P57682 Krueppel-like factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8635.8635.4 9.18 9.18 9.18 2 1 1 0 516.0372 1981.1595 S250s TMT10 244 (K) RPLPVEsPDTQRK (R) RPLPVES(0.99)PDT(0.0)QRK K:TMT10,s:Phosphorylated S KLF3 39170.3 3 27 394.2 330.8 HUMAN 1 -14.1849 12.3591 KRPLRAPSPEPAAPR-p P20749;S41-p KRPLRAPSPEPAAPR 0.819226860557372 0.169716802290957 -0.036 -0.14 1.66847406680652 10.1296091277281 -0.036 -0.14 0.681008595231074 0.0970597318690885 -0.434063821891005 -2.00341523870551 P20749 BCL3 P20749.S41.p_BCL3 P20749_S41s _1_1_41_41 P20749 P20749 B-cell lymphoma 3 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6199.6199.4 11.42 11.42 99 1 1 1 0 546.0664 2101.2758 S41s TMT10 34 (R) KRPLRAPsPEPAAPR (G) KRPLRAPS(1.0)PEPAAPR K:TMT10,s:Phosphorylated S BCL3 47982.1 6 1 2461.1 82.37 HUMAN 1 -1.6685 -10.1296 KRPPTPCSDPERKRF-p Q9BW71;S87-p KRPPTPCSDPERKRF 0.29484690778114 0.149659119101038 0.263666666666667 -0.250333333333333 10.0062228938603 10.8542064453703 0.263666666666667 -0.250333333333333 0.0998568151810379 0.0821446636074573 1.98279160541067 -2.12964116208873 Q9BW71 HIRIP3 Q9BW71.S87.p_HIRIP3 Q9BW71_S87s _1_1_87_87 Q9BW71 Q9BW71|Q9BW71-2|Q9BW71-3 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4975.4975.3 9.06 4.41 1.789 2 1 1 0 540.9187 1540.7739 S87s TMT10 81 (K) RPPTPCsDPER (K) RPPT(0.0)PCS(0.99)DPER C:Carbamidomethylation,s:Phosphorylated S HIRIP3 62298.3 4 3 178.1 481.23 HUMAN 1 10.0062 -10.8542 KRPQRATSNVFAMFD-p J3QRS3;S25-p KRPQRATSNVFAMFD 0.568273062505332 0.0255511911338801 -0.17 -0.388333333333333 4.51824113309621 21.66941044905 -0.17 -0.388333333333333 0.353326235850311 0.00680861778809913 -1.01498343395484 -4.24233909268266 J3QRS3 MYL12A J3QRS3.S25.p_MYL12A J3QRS3_S25s _1_1_25_25 J3QRS3 J3QRS3|O14950|P24844|P19105|P24844-2 Myosin regulatory light chain 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.34278.34278.2 16.59 16.59 1.391 3 1 1 0 1315.1435 2549.311 S25s TMT10 23 (R) ATsNVFAMFDQSQIQEFK (E) AT(0.0)S(0.99)NVFAMFDQS(0.0)QIQEFK K:TMT10,s:Phosphorylated S MYL12A 20513.6 15 1 2636.1 75.75 HUMAN 1 -4.5182 -21.6694 KRPRCDDSPRTPSNT-p Q9Y3Z3;S18-p KRPRCDDSPRTPSNT 0.315238283986219 0.0122250448062232 0.146333333333333 0.402 9.38162085511724 26.7044280363051 0.146333333333333 0.403959734901489 0.11530228512978 0.00213578334914167 1.87444612875926 5.48135966029351 Q9Y3Z3 SAMHD1 Q9Y3Z3.S18.p_SAMHD1 Q9Y3Z3_S18sS33s_2_2_18_33 Q9Y3Z3 Q9Y3Z3|Q9Y3Z3-4|Q9Y3Z3-3 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21016.21016.4 18.78 18.78 1.292 7 2 2 0 965.9282 3700.759 S18s S33s TMT10 15 (R) CDDsPRTPSNTPSAEADWsPGLELHPDYK (T) CDDS(0.99)PRT(0.0)PS(0.0)NT(0.0)PS(0.0)AEADWS(0.99)PGLELHPDY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SAMHD1 72940.9 10 6 1871.1 109.9 HUMAN 1 9.3816 26.7044 KRPRECDSPSYQKRQ-p Q8NHU0;S24-p KRPRECDSPSYQKRQ 0.897911962932873 0.68538845943683 -0.0383333333333333 -0.101666666666667 0.917384056832535 2.24590289347636 -0.0383333333333333 -0.101666666666667 0.809583399376956 0.596224352557662 -0.253024740065804 -0.562527316383417 Q8NHU0 CT45A3 Q8NHU0.S24.p_CT45A3 Q8NHU0_S24s _1_1_24_24 Q8NHU0 Q5HYN5|P0DMU9|Q8NHU0|P0DMU8|P0DMV2 Cancer/testis antigen family 45 member A3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7665.7665.3 8.6 8.6 1.148 3 1 1 0 551.2526 1571.7776 S24s TMT10 21 (R) ECDsPSYQK (R) ECDS(0.99)PS(0.0)Y(0.0)QK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CT45A3 21558.6 2 1 2045.1 100.95 HUMAN 1 -0.9174 -2.2459 KRPSGRDTPISEGPK-p Q15058;T915-p KRPSGRDTPISEGPK 0.333569043903612 0.0181749418560776 -0.162333333333333 0.351666666666667 8.89915824720545 23.961903158162 -0.162333333333333 0.351666666666667 0.128849926537834 0.00401614777311588 -1.79090670463006 4.77992726502422 Q15058 KIF14 Q15058.T915.p_KIF14 Q15058_T915t _1_1_915_915 Q15058 Q15058 Kinesin-like protein KIF14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5145.5145.4 8.03 8.03 1.445 3 1 1 0 509.524 1955.1074 T915t TMT10 909 (K) RPSGRDtPISEGPK (D) RPS(0.0)GRDT(0.99)PIS(0.0)EGPK K:TMT10,t:Phosphorylated T KIF14 187857.6 1 7 1771.1 116.14 HUMAN 1 -8.8992 23.9619 KRPTELLSNPQFIVD-p P07384;S93-p KRPTELLSNPQFIVD 0.696334309389433 0.151435219300912 -0.0666666666666667 0.156 2.95368440111852 10.780398678114 -0.0666666666666666 0.156 0.506560777644679 0.0835526314206934 -0.710989276991242 2.11674754119979 P07384 CAPN1 P07384.S93.p_CAPN1 P07384_S93s _1_1_93_93 P07384 P07384|E9PRM1 Calpain-1 catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24125.24125.3 12.91 9.26 3.857 3 1 1 0 956.1817 2786.5718 S93s TMT10 85 (K) WKRPTELLsNPQFIVDGATR (T) WKRPT(0.0)ELLS(0.99)NPQFIVDGAT(0.0)R K:TMT10,s:Phosphorylated S CAPN1 82516.1 3 2 1866.1 110.2 HUMAN 1 -2.9537 10.7804 KRPVDAKSDEKASVV-p Q14241;S285-p KRPVDAKSDEKASVV 0.982842045127411 0.17038905551801 0.00333333333333333 0.223333333333333 0.147857810487686 10.1048623660758 0.00333333333333333 0.223333333333333 0.966527508240405 0.097614371728367 0.0439408195269241 1.99911667647505 Q14241 TCEB3 Q14241.S285.p_TCEB3 Q14241_S285s _1_1_285_285 Q14241 Q14241|A0A024RAC6 Elongin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5944.5944.5 9.75 9.75 99 1 1 1 0 477.6733 2304.3693 S285s TMT10 277 (K) DKRPVDAKsDEK (A) DKRPVDAKS(1.0)DEK K:TMT10,s:Phosphorylated S ELOA 90363.7 2 2 2069.1 99.52 HUMAN 1 0.1479 10.1049 KRQCRSLSFSDEMSS-p Q14153;S118-p KRQCRSLSFSDEMSS 0.0651075040180817 0.0120753546477919 -0.414333333333333 -0.537333333333333 25.6469892652082 26.7903277781884 -0.414333333333333 -0.537333333333333 0.00272458946782743 0.0020939544113641 -5.20952780039687 -5.50445604075833 Q14153 FAM53B Q14153.S118.p_FAM53B Q14153_S118s _1_1_118_118 Q14153 Q14153|Q14153-2 Protein FAM53B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17267.17267.2 14.1 10.18 2.214 5 1 1 0 857.8539 1634.7352 S118s TMT10 116 (R) SLsFSDEMSSCR (T) S(0.0)LS(0.99)FS(0.0)DEMS(0.0)S(0.0)CR C:Carbamidomethylation,s:Phosphorylated S FAM53B 47022.4 2 1 3529.1 48.94 HUMAN 1 -25.647 -26.7903 KRQLRVRTIYESKMI-p O60832;T198-p KRQLRVRTIYESKMI 0.615815677187103 0.787329527902804 -0.0696666666666667 0.0333333333333333 3.90734882877875 1.44194539575107 -0.0696666666666667 0.0333333333333333 0.4066915201663 0.717472831682038 -0.89937733224118 0.381295157980455 O60832 DKC1 O60832.T198.p_DKC1 O60832_T198t _1_1_198_198 O60832 O60832|O60832-2 H/ACA ribonucleoprotein complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11819.11819.3 9.6 2.14 9.596 3 1 1 0 511.9529 1453.8779 T198t TMT10 196 (R) VRtIYESK (M) VRT(0.99)IY(0.0)ES(0.0)K K:TMT10,t:Phosphorylated T DKC1 58129.5 1 3 363.1 342.61 HUMAN 1 -3.9073 1.4419 KRQSLPASPRARLSA-p Q3KQU3;S446-p KRQSLPASPRARLSA 0.878163316796656 0.00934833010837682 0.032 -0.614333333333333 1.10981202901218 28.6457082814594 0.032 -0.614333333333333 0.774495318721086 0.00136593229058683 0.301201242090343 -6.02144646509199 Q3KQU3 MAP7D1 Q3KQU3.S446.p_MAP7D1 Q3KQU3_S446s _1_1_446_446 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4635.4635.2 12.09 3.18 5.611 2 1 1 0 468.2209 855.4683 S446s Hydrogen 441 (R) QSLPAsPR (A) QS(0.0)LPAS(0.99)PR s:Phosphorylated S MAP7D1 93160.6 3 15 160.1 495.56 HUMAN 1 1.1098 -28.6457 KRQSSTPSAPELGQQ-p Q93100-2;S697-p KRQSSTPSAPELGQQ 0.361753568197081 0.975472279244207 -0.160666666666667 0.00433333333333334 8.20461545468242 0.152906522814044 -0.160666666666667 0.00433333333333333 0.151195356910813 0.965404564181052 -1.67063847269427 0.045411988999552 Q93100 PHKB Q93100.2.S697.p_PHKB Q93100-2_S697s _1_1_697_697 Q93100-2 Q93100|Q93100-3|Q93100-2|Q93100-4 Isoform 2 of Phosphorylase b kinase regulatory subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24610.24610.2 15.14 15.14 1.187 5 1 1 0 1468.7202 2856.478 S697s TMT10 692 (R) QSSTPsAPELGQQPDVNISEWK (D) QS(0.0)S(0.0)T(0.0)PS(0.99)APELGQQPDVNIS(0.0)EWK K:TMT10,s:Phosphorylated S PHKB 125160.1 1 8 1018.1 188.04 HUMAN 1 -8.2046 0.1529 KRRASWASENGETDA-p Q12789;S1868-p KRRASWASENGETDA 0.359061198491431 0.00387979257248964 -0.241333333333333 0.672 8.26621466945247 35.6158817383162 -0.241333333333333 0.672 0.149065977752538 0.000274417514321117 -1.68131297889058 8.32372724383142 Q12789 GTF3C1 Q12789.S1868.p_GTF3C1 Q12789_S1865sS1868s_2_2_1865_1868 Q12789 Q12789|Q12789-3 General transcription factor 3C polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15670.15670.2 15.7 14.82 2.11 5 2 2 0 1285.5334 2410.103 S1865s S1868s Hydrogen 1864 (R) AsWAsENGETDAEGTQMTPAK (R) AS(0.99)WAS(0.99)ENGET(0.0)DAEGT(0.0)QMT(0.0)PAK K:TMT10-Lys-Only,s:Phosphorylated S GTF3C1 241209.8 9 18 225.1 425.73 HUMAN 1 -8.2662 35.6159 KRREGTRSADNTLER-p Q96QZ7;S1361-p KRREGTRSADNTLER 0.513238302111037 0.291026461229561 -0.129666666666667 0.148666666666667 5.35467185090599 7.07529546148274 -0.129666666666667 0.148666666666667 0.291429032766804 0.196096776135829 -1.16867468701323 1.47377538508434 Q96QZ7 MAGI1 Q96QZ7.S1361.p_MAGI1 Q96QZ7_S1361s _1_1_1361_1361 Q96QZ7 Q96QZ7|Q96QZ7-2|Q96QZ7-6|Q96QZ7-7|A0A087WT53 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4955.4955.3 11.83 11.83 2.267 3 1 1 0 553.2634 1577.8081 S1361s TMT10 1357 (R) EGTRsADNTLER (R) EGT(0.0)RS(0.99)ADNT(0.0)LER s:Phosphorylated S MAGI1 165548 4 8 1223.1 164.72 HUMAN 1 -5.3547 7.0753 KRRGRASSESQIFEL-p Q9BV36;S337-p KRRGRASSESQIFEL 0.118403246417576 0.0646999365428139 -0.363333333333333 0.309 19.2781334580784 15.8247845396358 -0.363333333333333 0.309 0.0118082803133437 0.0261530019410026 -3.72571405953544 3.03250516718026 Q9BV36 MLPH Q9BV36.S337.p_MLPH Q9BV36_S337s _1_1_337_337 Q9BV36 Q9BV36|Q9BV36-4 Melanophilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21483.21483.2 11.94 11.94 1.125 3 1 1 0 945.9847 1810.9951 S337s TMT10 335 (R) ASsESQIFELNK (H) AS(0.0)S(0.99)ES(0.0)QIFELNK K:TMT10,s:Phosphorylated S MLPH 66632.6 1 4 496.1 293.1 HUMAN 1 -19.2781 15.8248 KRRHKSDSPESDAER-p O75400;S885-p KRRHKSDSPESDAER 0.855013699915087 0.019429497948105 0.0396666666666667 0.327666666666667 1.32175641656645 23.5078738511522 0.0396666666666667 0.327666666666667 0.737605859963365 0.00445874479007141 0.352748010885998 4.67014459752339 O75400 PRPF40A O75400.S885.p_PRPF40A O75400_S885sS888s_2_2_885_888 O75400 O75400|O75400-3|O75400-2 Pre-mRNA-processing factor 40 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5396.5396.5 9.79 9.79 2.423 3 2 2 0 493.2379 2302.2242 S885s S888s TMT10 881 (R) HKSDsPEsDAEREK (D) HKS(0.0)DS(0.99)PES(0.99)DAEREK K:TMT10,s:Phosphorylated S PRPF40A 109088.4 10 12 718.2 237.38 HUMAN 2 1.3218 23.5079 KRRHKSNSPESETDP-p F8VU11;S816-p KRRHKSNSPESETDP 0.103884021690019 0.0423677491977485 -0.571333333333333 0.538 20.7557397930133 18.3914560633824 -0.571333333333333 0.538 0.00840283857900012 0.0144828620379669 -4.04305031378983 3.53894922200105 F8VU11 PRPF40B F8VU11.S816.p_PRPF40B F8VU11_S816sS819sT821t_3_3_816_821 F8VU11 F8VU11|Q6NWY9|Q6NWY9-3|Q6NWY9-2 PRP40 pre-mRNA processing factor 40 homolog B (Yeast), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7745.7958.3 8.04 8.04 1.153 4 3 3 0 716.2803 1906.9282 S816s S819s T821t TMT10 814 (K) SNsPEsEtDPEEK (A) S(0.0)NS(0.99)PES(0.99)ET(0.99)DPEEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T PRPF40B 101691.8 2 7 1236.1 163.46 HUMAN 1 -20.7557 18.3915 KRRHRPRTPPFSESE-p Q8IVM0-2;T310-p KRRHRPRTPPFSESE 0.100287824494648 0.00967750202689351 0.357666666666667 0.460333333333333 21.1283059346381 28.3721814877987 0.357666666666667 0.460333333333333 0.00771204236323022 0.00145472817814963 4.12539067454666 5.9429900625803 Q8IVM0 CCDC50 Q8IVM0.2.T310.p_CCDC50 Q8IVM0-2_T310t _1_1_310_310 Q8IVM0-2 Q8IVM0-2 Isoform 2 of Coiled-coil domain-containing protein 50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13131.13131.4 24.73 24.73 6.014 3 1 1 0 679.5765 2635.3136 T310t Hydrogen 310 (R) tPPFSESEEQLHLHDAGMKPR (V) T(0.99)PPFS(0.0)ES(0.0)EEQLHLHDAGMKPR K:TMT10-Lys-Only,t:Phosphorylated T CCDC50 56680.9 1 2 4278.1 34.35 HUMAN 1 21.1283 28.3722 KRRILIPSDIESSKS-p P30414;S463-p KRRILIPSDIESSKS 0.275757791818365 0.0352307392632232 0.182333333333333 0.281 10.582316826993 19.5650019782059 0.182333333333333 0.281 0.0874517122877727 0.0110534996589721 2.08308581608951 3.78276893673438 P30414 NKTR P30414.S463.p_NKTR P30414_S463s _1_1_463_463 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20238.20238.3 14.3 14.3 2.667 3 1 1 0 632.6933 1816.0944 S463s TMT10 458 (R) RILIPsDIESSK (S) RILIPS(0.99)DIES(0.0)S(0.0)K K:TMT10,s:Phosphorylated S NKTR 166700.6 9 11 202.1 449.45 HUMAN 1 10.5823 19.565 KRRKGSGSEQEGEDE-p Q6PD62;S943-p KRRKGSGSEQEGEDE 0.817788700559403 0.222428152242474 0.034 0.130666666666667 1.6803179145003 8.59724850361763 0.034 0.130666666666667 0.679153915020164 0.138125909168067 0.436781677900206 1.73804949763714 Q6PD62 CTR9 Q6PD62.S943.p_CTR9 Q6PD62_S941sS943s_2_2_941_943 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4006.4006.3 12.9 12.9 99 2 2 2 0 842.6984 2366.1472 S941s S943s Hydrogen 939 (R) KGsGsEQEGEDEEGGERK (K) KGS(1.0)GS(1.0)EQEGEDEEGGERK K:TMT10-Lys-Only,s:Phosphorylated S CTR9 134412.8 12 12 152.1 508.81 HUMAN 1 1.6803 8.5972 KRRKIQKSVDLGNSD-p Q5SVZ6;S944-p KRRKIQKSVDLGNSD 0.438077651310896 0.564617342457811 0.127333333333333 0.0553333333333333 6.59949011171473 3.34669602961264 0.127333333333333 0.0553333333333334 0.218801849562445 0.462732919598056 1.39070736376189 0.789873443931838 Q5SVZ6 ZMYM1 Q5SVZ6.S944.p_ZMYM1 Q5SVZ6_S944s _1_1_944_944 Q5SVZ6 Q5SVZ6 Zinc finger MYM-type protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27701.27701.3 16.02 16.02 4.769 6 1 1 0 983.1194 2867.381 S944s TMT10 944 (K) sVDLGNSDNMFFPTSTEEQYK (I) S(0.99)VDLGNS(0.0)DNMFFPT(0.0)S(0.0)T(0.0)EEQY(0.0)K K:TMT10,s:Phosphorylated S ZMYM1 131624.2 1 1 5820.1 16.02 HUMAN 1 6.5995 3.3467 KRRKRKMSGGSTMSS-p Q86U70;S302-p KRRKRKMSGGSTMSS 0.895249079123384 0.132299385475931 0.0206666666666667 0.305333333333333 0.940917022902555 11.5801528828494 0.0206666666666667 0.305333333333333 0.805208401620224 0.0694999851372374 0.258991708389244 2.25699892073407 Q86U70 LDB1 Q86U70.S302.p_LDB1 Q86U70_S302s _1_1_302_302 Q86U70 Q86U70|Q86U70-2|Q86U70-3 LIM domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7578.7578.3 16.77 16.77 1.183 8 1 1 0 805.0229 2333.0862 S302s TMT10 301 (K) MsGGSTMSSGGGNTNNSNSK (K) MS(0.99)GGS(0.0)T(0.0)MS(0.0)S(0.0)GGGNT(0.0)NNS(0.0)NS(0.0)K K:TMT10,s:Phosphorylated S LDB1 47159.4 47 4 765.1 229.16 HUMAN 1 0.9409 11.5802 KRRLLEDSDSEDEAA-p Q9BW85;S211-p KRRLLEDSDSEDEAA 0.752880589938391 0.167055830818824 0.044 0.154666666666667 2.35230618907635 10.2216908869017 0.044 0.154666666666667 0.58179419157549 0.0950234756182815 0.585482646596058 2.01941630099043 Q9BW85 CCDC94 Q9BW85.S211.p_CCDC94 Q9BW85_S211sS213s_2_2_211_213 Q9BW85 Q9BW85 Coiled-coil domain-containing protein 94 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27143.27813.5 27.94 27.94 10.575 4 2 2 0 946.4891 4568.4815 S211s S213s TMT10 206 (R) RLLEDsDsEDEAAPSPLQPALRPNPTAILDEAPKPK (R) RLLEDS(0.99)DS(0.99)EDEAAPS(0.0)PLQPALRPNPT(0.0)AILDEAPKPK K:TMT10,s:Phosphorylated S CCDC94 37370.4 25 3 2597.1 77.21 HUMAN 1 2.3523 10.2217 KRRLRKNSSRDSGRG-p Q53EL6;S67-p KRRLRKNSSRDSGRG 0.0495429320354942 0.0057116426609052 -0.823 -0.560333333333333 28.8942515181989 32.4812823237545 -0.823 -0.560333333333333 0.00128995585528612 0.000564770192780006 -6.10262547647847 -7.21136027100685 Q53EL6 PDCD4 Q53EL6.S67.p_PDCD4 Q53EL6_S67s _1_1_67_67 Q53EL6 Q53EL6|Q53EL6-2 Programmed cell death protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4134.4134.4 14.31 8.87 1.173 7 1 1 0 698.5899 2711.3709 S67s TMT10 65 (R) KNsSRDSGRGDSVSDSGSDALR (S) KNS(0.99)S(0.0)RDS(0.0)GRGDS(0.0)VS(0.0)DS(0.0)GS(0.0)DALR K:TMT10,s:Phosphorylated S PDCD4 52133.7 10 3 476.1 301.17 HUMAN 1 -28.8943 -32.4813 KRRMKLGSDISKHHK-p Q5JR04;S41-p KRRMKLGSDISKHHK 0.135175709599961 0.893074797247181 -0.281 0.0173333333333333 17.8235270510867 0.688948957060647 -0.281 0.0173333333333334 0.0165062072930714 0.853306599109328 -3.42663826474571 0.193906722156915 Q5JR04 MOV10 Q5JR04.S41.p_MOV10 Q5JR04_S41s _1_1_41_41 Q5JR04 Q9HCE1|Q5JR04|Q9HCE1-2 Mov10, Moloney leukemia virus 10, homolog (Mouse), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14358.14358.2 10.8 10.8 2.342 2 1 1 0 629.347 1177.7193 S41s TMT10 39 (K) LGsDISK (H) LGS(0.99)DIS(0.0)K K:TMT10,s:Phosphorylated S MOV10 108006.7 2 1 2539.1 79.32 HUMAN 1 -17.8235 0.6889 KRRNRNASASFQELE-p Q99543;S47-p KRRNRNASASFQELE 0.376812775473023 0.315782591117526 -0.139 -0.143 7.83557728186768 6.61370256702389 -0.139 -0.143 0.164604715251156 0.218086982379431 -1.60662413274566 -1.3928458376468 Q99543 DNAJC2 Q99543.S47.p_DNAJC2 Q99543_S47s _1_1_47_47 Q99543 Q99543|Q99543-2|F2Z3N9|F2Z3H0 DnaJ homolog subfamily C member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16251.16251.3 10.29 10.29 2.522 2 1 1 0 669.007 1925.038 S47s Hydrogen 45 (R) NAsASFQELEDKK (E) NAS(0.99)AS(0.0)FQELEDKK K:TMT10-Lys-Only,s:Phosphorylated S DNAJC2 72508.6 9 1 2137.1 96.08 HUMAN 1 -7.8356 -6.6137 KRRPRDQSLSPSKGE-p Q5TCQ9;S1280-p KRRPRDQSLSPSKGE 0.348575535849591 0.921561680751789 -0.127666666666667 -0.0156666666666667 8.506034016641 0.498443736492968 -0.127666666666667 -0.0156666666666667 0.141057635075619 0.891570368822541 -1.72285142732462 -0.142845815365334 Q5TCQ9 MAGI3 Q5TCQ9.S1280.p_MAGI3 Q5TCQ9_S1280sS1282s_2_2_1280_1282 Q5TCQ9 Q5TCQ9|Q5TCQ9-4 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8142.8142.3 8.77 8.77 8.766 3 2 2 0 636.6351 1747.959 S1280s S1282s Hydrogen 1278 (R) DQsLsPSKGENK (S) DQS(0.99)LS(0.99)PS(0.0)KGENK K:TMT10-Lys-Only,s:Phosphorylated S MAGI3 166517.7 4 10 1019.1 188.04 HUMAN 1 -8.506 -0.4984 KRRQEIESDSESDGE-p Q9BYW2;S1413-p KRRQEIESDSESDGE 0.867635849079879 0.0775282848153013 -0.028 0.202666666666667 1.20129741506794 14.7332445255417 -0.028 0.202666666666667 0.758350990759107 0.0336260262326801 -0.323636515948767 2.82676459992213 Q9BYW2 SETD2 Q9BYW2.S1413.p_SETD2 Q9BYW2_S1413sS1415sS1417s_3_3_1413_1417 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7629.7629.3 9.65 9.65 99 3 3 3 0 864.0187 2350.132 S1413s S1415s S1417s Hydrogen 1408 (R) RQEIEsDsEsDGELQDRK (K) RQEIES(1.0)DS(1.0)ES(1.0)DGELQDRK K:TMT10-Lys-Only,s:Phosphorylated S SETD2 290615.4 3 38 58.1 711.11 HUMAN 1 -1.2013 14.7332 KRRQRSMSPTSTPKA-p O94913;S511-p KRRQRSMSPTSTPKA 0.707346369684743 0.0705719620564238 0.0663333333333333 0.271 2.82657316895815 15.3088918018167 0.0663333333333333 0.271 0.521606125737508 0.0294517306380547 0.684961719189932 2.93462382826438 O94913 PCF11 O94913.S511.p_PCF11 O94913_S511s _1_1_511_511 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9218.9218.2 13 8.17 1.382 5 1 1 0 737.3746 1393.7761 S511s TMT10 509 (R) SMsPTSTPK (A) S(0.0)MS(0.99)PT(0.0)S(0.0)T(0.0)PK K:TMT10,s:Phosphorylated S PCF11 173731.7 5 7 508.1 288.88 HUMAN 1 2.8266 15.3089 KRRRETPSPRPMRHR-p Q9UQ35;S2740-p KRRRETPSPRPMRHR 0.140818172070489 0.825533350414788 0.625666666666667 0.036 17.4017290196644 1.16553355173005 0.625666666666667 0.036 0.0181897654078474 0.764621745196805 3.34218244495108 0.314868688244425 Q9UQ35 SRRM2 Q9UQ35.S2740.p_SRRM2 Q9UQ35_T2738tS2740s_2_2_2738_2740 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.2899.2899.4 9.77 9.77 99 2 2 2 0 386.4244 1382.7434 T2738t S2740s Hydrogen 2735 (R) RREtPsPRPMR (H) RRET(1.0)PS(1.0)PRPMR t:Phosphorylated T,s:Phosphorylated S SRRM2 300351.7 15 245 2.1 3310.34 HUMAN 1 17.4017 1.1655 KRRRFHESYNFNMKC-p O95251;S178-p KRRRFHESYNFNMKC 0.0933084416341688 0.262665700877785 -0.366 -0.114 21.88892815959 7.64863641312734 -0.366 -0.114 0.00647302350499325 0.171844785639105 -4.29657612157256 -1.57366634926297 O95251 KAT7 O95251.S178.p_KAT7 O95251_S178s _1_1_178_178 O95251 O95251|O95251-4|E7EUP3 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18163.18163.3 10.51 10.51 4.476 2 1 1 0 618.9604 1774.8987 S178s TMT10 175 (R) FHEsYNFNMK (C) FHES(0.99)Y(0.0)NFNMK K:TMT10,s:Phosphorylated S KAT7 71325.8 1 10 691.1 243.06 HUMAN 1 -21.8889 -7.6486 KRRRQRGSENGNEGS-p Q5JSZ5;S1153-p KRRRQRGSENGNEGS 0.0211572678163944 0.0011418699812441 -1.12833333333333 -1.19066666666667 39.0157647853134 48.8524933107596 -1.12833333333333 -1.19066666666667 0.000125436382703717 1.3024188372807e-05 -9.71909628044322 -14.9313002444848 Q5JSZ5 PRRC2B Q5JSZ5.S1153.p_PRRC2B Q5JSZ5_S1153s _1_1_1153_1153 Q5JSZ5 Q5JSZ5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14668.14668.4 11.55 11.55 11.546 4 1 1 0 718.6121 2791.4586 S1153s TMT10 1150 (R) QRGsENGNEGSLLEREESTLK (K) QRGS(0.99)ENGNEGS(0.0)LLEREES(0.0)T(0.0)LK K:TMT10,s:Phosphorylated S PRRC2B 244103.4 1 70 36.2 882.05 HUMAN 1 -39.0158 -48.8525 KRRRQRQSGVVVEEP-p Q9NYV4-2;S1053-p KRRRQRQSGVVVEEP 0.235442260231975 0.454322307899868 0.200666666666667 0.0833333333333333 12.0364712524877 4.56763681999131 0.200666666666667 0.0833333333333333 0.0625680867105412 0.349330349192973 2.33880522453818 1.0240016000496 Q9NYV4 CDK12 Q9NYV4.2.S1053.p_CDK12 Q9NYV4-2_S1053s _1_1_1053_1053 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9424.9424.3 15.28 12.9 12.099 2 1 1 0 725.7228 2095.1912 S1053s TMT10 1050 (R) QRQsGVVVEEPPPSK (T) QRQS(0.99)GVVVEEPPPS(0.0)K K:TMT10,s:Phosphorylated S CDK12 163853.1 1 28 59.1 708.76 HUMAN 1 12.0365 4.5676 KRRRRRRSASPPPAT-p Q9H7N4;S612-p KRRRRRRSASPPPAT 0.864103736661318 0.0827361607772573 0.0253333333333333 0.265666666666667 1.23683112231729 14.3333197052811 0.0253333333333333 0.265666666666667 0.752171524101952 0.0368695663407912 0.332273591151685 2.75262547611376 Q9H7N4 SCAF1 Q9H7N4.S612.p_SCAF1 Q9H7N4_S612sS614s_2_2_612_614 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2807.2807.2 19.99 12.32 19.992 9 2 2 0 783.2977 1405.6554 S612s S614s Hydrogen 612 (R) sAsPPPATSSSSSSR (R) S(0.99)AS(0.99)PPPAT(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)R s:Phosphorylated S SCAF1 139895 7 27 76.1 647.25 HUMAN 1 1.2368 14.3333 KRRRRVNSDCDSVLP-p Q7L2J0;S175-p KRRRRVNSDCDSVLP 0.0990820185181755 0.92942625535593 -0.315333333333333 0.0106666666666667 21.2285076333165 0.448853409271943 -0.315333333333333 0.0106666666666667 0.00753614483886259 0.90180919487384 -4.14770307498423 0.129263251330107 Q7L2J0 MEPCE Q7L2J0.S175.p_MEPCE Q7L2J0_S175s _1_1_175_175 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.37293.37293.4 22.66 22.66 1.206 5 1 1 0 1082.781 4248.1444 S175s TMT10 172 (R) RVNsDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSR (T) RVNS(0.99)DCDS(0.0)VLPS(0.0)NFLLGGNIFDPLNLNS(0.0)LLDEEVS(0.0)R C:Carbamidomethylation,s:Phosphorylated S MEPCE 74981.5 1 5 428.1 317.7 HUMAN 1 -21.2285 0.4489 KRRSGKNSQEDSEDS-p Q9H1E3;S54-p KRRSGKNSQEDSEDS 0.286866398353762 0.0199274763775543 0.177333333333333 0.59 10.2296167378353 23.314698091422 0.177333333333333 0.59 0.0948502164330473 0.00466154832569947 2.02163248473917 4.62394768408863 Q9H1E3 NUCKS1 Q9H1E3.S54.p_NUCKS1 Q9H1E3_S54s _1_1_54_54 Q9H1E3 Q9H1E3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6165.6165.4 16.3 16.3 1.913 4 1 1 0 691.8334 2684.3466 S54s Hydrogen 50 (R) SGKNsQEDSEDSEDKDVK (T) S(0.0)GKNS(0.99)QEDS(0.0)EDS(0.0)EDKDVK K:TMT10-Lys-Only,s:Phosphorylated S NUCKS1 27295.9 5 5 48.1 767.83 HUMAN 1 10.2296 23.3147 KRRSNVSSPATPTAS-p Q12888-2;S1640-p KRRSNVSSPATPTAS 0.205040440663841 0.0445942976251031 0.230666666666667 0.244 13.3120131488885 18.0810871288472 0.230666666666667 0.244 0.0466443112978204 0.0155557618999382 2.56744498568917 3.47583262197331 Q12888 TP53BP1 Q12888.2.S1640.p_TP53BP1 Q12888-2_S1640s _1_1_1640_1640 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6692.6692.2 14.24 12.53 1.175 13 1 1 0 1166.5481 2252.1204 S1640s TMT10 1636 (R) SNVSsPATPTASSSSSTTPTR (K) S(0.0)NVS(0.0)S(0.99)PAT(0.0)PT(0.0)AS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)T(0.0)T(0.0)PT(0.0)R s:Phosphorylated S TP53BP1 216167.2 6 67 3.1 2297.07 HUMAN 1 13.312 18.0811 KRRTRSRSPESQVIG-p O95218-2;S307-p KRRTRSRSPESQVIG 0.336940767668124 0.00490419310356517 0.134666666666667 0.561666666666667 8.80292678926045 33.7002184902721 0.134666666666667 0.561666666666667 0.13173686407237 0.000426558058448175 1.77424921294828 7.62775626842365 O95218 ZRANB2 O95218.2.S307.p_ZRANB2 O95218-2_S307s _1_1_307_307 O95218-2 O95218-2 Isoform 2 of Zinc finger Ran-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9982.9982.2 10.81 10.81 1.112 4 1 1 0 1148.0951 2215.2083 S307s TMT10 305 (R) SRsPESQVIGENTKQP (-) S(0.0)RS(0.99)PES(0.0)QVIGENT(0.0)KQP K:TMT10,s:Phosphorylated S ZRANB2 36774.1 7 6 212.1 438.05 HUMAN 1 8.8029 33.7002 KRSAGGSSPEGGEDS-p Q9H6Z4-3;S33-p KRSAGGSSPEGGEDS 0.547515630186733 0.0079657699052288 0.086 0.450666666666667 4.82976605408957 29.9325408679188 0.086 0.449739058813296 0.328869345944802 0.00101565430390117 1.07276749951188 6.40150843658041 Q9H6Z4 RANBP3 Q9H6Z4.3.S33.p_RANBP3 Q9H6Z4-3_S32sS33s_2_2_32_33 Q9H6Z4-3 Q9H6Z4|Q9H6Z4-2|Q9H6Z4-3|B7Z7F3|K7ENB9|K7EID7 Isoform 3 of Ran-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8905.9116.3 9.89 9.89 2.354 5 2 2 0 1114.4774 3181.4857 S32s S33s TMT10 28 (R) SAGGssPEGGEDSDREDGNYCPPVKR (E) S(0.0)AGGS(0.99)S(0.99)PEGGEDS(0.0)DREDGNY(0.0)CPPVKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RANBP3 53752.1 10 15 444.1 311.24 HUMAN 2 4.8298 29.9325 KRSALENSEEHSAKY-p Q7Z7A4;S475-p KRSALENSEEHSAKY 0.127996181321649 0.00682425892404742 0.272333333333333 0.574333333333333 18.4969198383275 31.0801225627531 0.272333333333333 0.574333333333333 0.0141353971882347 0.000779808103157152 3.563539744476 6.75638434176248 Q7Z7A4 PXK Q7Z7A4.S475.p_PXK Q7Z7A4_S475s _1_1_475_475 Q7Z7A4 Q7Z7A4|A0A0C4DG95|Q7Z7A4-4|W5RWE6|Q7Z7A4-6|Q7Z7A4-2|H7BYG4|Q7Z7A4-7|E9PD56|Q7Z7A4-5|Q7Z7A4-3 PX domain-containing protein kinase-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6239.6239.3 15.47 15.47 3.735 3 1 1 0 613.965 1759.9227 S475s TMT10 470 (R) SALENsEEHSAK (Y) S(0.0)ALENS(0.99)EEHS(0.0)AK K:TMT10,s:Phosphorylated S PXK 65519.4 1 2 2759.1 71.55 HUMAN 1 18.4969 31.0801 KRSCGTDSQSENEAS-p Q9H8U3;S122-p KRSCGTDSQSENEAS 0.0360961121648541 0.00266411370065118 -0.708666666666667 -1.126 33.0856198768243 39.1182066341895 -0.708666666666667 -1.126 0.000491403236269274 0.000122512199393215 -7.42870774641737 -9.74172911641699 Q9H8U3 ZFAND3 Q9H8U3.S122.p_ZFAND3 Q9H8U3_S122sS124sS129s_3_3_122_129 Q9H8U3 Q9H8U3 AN1-type zinc finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6955.6955.2 9.69 9.69 2.115 5 3 3 0 1082.8906 1924.8756 S122s S124s S129s Hydrogen 117 (R) SCGTDsQsENEAsPVK (R) S(0.0)CGT(0.0)DS(0.99)QS(0.99)ENEAS(0.99)PVK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S ZFAND3 26039.5 3 3 4596.1 29.06 HUMAN 1 -33.0856 -39.1182 KRSGNSDSIERDAAQ-p Q7Z2E3;S137-p KRSGNSDSIERDAAQ 0.452003692627812 0.239807419198256 -0.149666666666667 0.13 6.36272771729044 8.17090930899491 -0.149666666666667 0.13 0.231061308419302 0.152373368692787 -1.34893299349342 1.66425703566548 Q7Z2E3 APTX Q7Z2E3.S137.p_APTX Q7Z2E3_S137s_1_1_137_137 Q7Z2E3 Q7Z2E3|Q7Z2E3-7|Q7Z2E3-8 Aprataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19396.19396.4 13.27 13.27 1.185 7 1 1 0 1104.5452 4334.1773 S137s N157n TMT10 132 (R) SGNSDsIERDAAQEAEAGTGLEPGSnSGQCSVPLKK (G) S(0.0)GN(0.0)S(0.0)DS(0.99)IERDAAQEAEAGT(0.0)GLEPGS(0.0)N(0.99)S(0.0)GQCS(0.0)VPLKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated APTX 41138.7 3 2 1017.1 188.05 HUMAN 1 -6.3627 8.1709 KRSKIPRSQGCSREA-p E3W994;S499-p KRSKIPRSQGCSREA 0.384759435172544 0.502432214828608 0.588333333333333 -0.422666666666667 7.67884174596937 4.00242253686935 0.588333333333334 -0.422666666666667 0.170653745818248 0.397885164425219 1.57939358084493 -0.91743718968447 E3W994 NotFound E3W994.S499.p_NotFound E3W994_S499s _1_1_499_499 E3W994 F8WA11|Q7Z460-4|Q7Z460-2|A0A0U1RQI6|O75122|J3KR49|E3W994 CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3969.3969.4 10.44 10.44 2.4 3 1 1 0 454.2434 1733.9845 S499s TMT10 494 (R) SKIPRsQGCSR (E) S(0.0)KIPRS(0.99)QGCS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CLASP2 139660.6 1 10 158.1 498.15 HUMAN 1 7.6788 -4.0024 KRSKLGESQTLQQFS-p A0A0D9SGF6;S1550-p KRSKLGESQTLQQFS 0.221371400193213 0.0413134905901949 0.190333333333333 0.252 12.6132661679194 18.5524826124041 0.190333333333333 0.252 0.0547864781139276 0.013955703654776 2.44160745881639 3.5719149454676 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.S1550.p_SPTAN1 A0A0D9SGF6_S1550s _1_1_1550_1550 A0A0D9SGF6 A0A0D9SGF6|Q13813-2|A0A0D9SF54|Q13813-3 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15522.15522.3 14.44 14.44 2.143 4 1 1 0 716.3793 2067.1599 S1550s TMT10 1545 (R) SKLGEsQTLQQFSR (D) S(0.0)KLGES(0.99)QT(0.0)LQQFS(0.0)R K:TMT10,s:Phosphorylated S SPTAN1 288398.5 2 17 263.1 396.39 HUMAN 1 12.6133 18.5525 KRSKPSSSEEDEGPG-p Q01831;S399-p KRSKPSSSEEDEGPG 0.676823734876953 0.0277238968700976 0.0588333333333333 0.363666666666667 3.17397821970685 21.1070609188129 0.0588333333333333 0.363666666666667 0.481506526451949 0.00774986091013265 0.755533044169844 4.11654200842532 Q01831 XPC Q01831.S399.p_XPC Q01831_S398sS399s_2_2_398_399 Q01831 Q01831|Q01831-2 DNA repair protein complementing XP-C cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8483.8483.5 11.17 12.31 1.184 4 2 2 0 602.8948 2850.5139 S398s S399s TMT10 394 (R) SKPSssEEDEGPGDKQEK (A) S(0.0)KPS(0.0)S(0.99)S(0.99)EEDEGPGDKQEK K:TMT10,s:Phosphorylated S XPC 106806.6 5 11 780.1 226.3 HUMAN 2 3.174 21.1071 KRSPRRASAAAAAGG-p Q07617;S423-p KRSPRRASAAAAAGG 0.811438752299707 0.120732779557619 0.057 0.258666666666667 1.74430520485288 12.1049088115355 0.057 0.258666666666667 0.669220875107364 0.0615898460950223 0.451401310200541 2.34977187474554 Q07617 SPAG1 Q07617.S423.p_SPAG1 Q07617_S423s _1_1_423_423 Q07617 Q07617 Sperm-associated antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7761.7761.4 22.54 22.54 6.135 2 1 1 0 750.1323 2917.5393 S423s TMT10 421 (R) RAsAAAAAGGGATGHPGGGQGAENPAGLK (S) RAS(0.99)AAAAAGGGAT(0.0)GHPGGGQGAENPAGLK K:TMT10,s:Phosphorylated S SPAG1 104777.7 5 2 1758.1 117.12 HUMAN 1 1.7443 12.1049 KRSQIYGSRQIILEK-p P12956;S324-p KRSQIYGSRQIILEK 0.917992376474866 0.0206638190916108 0.0246666666666667 0.338 0.725967175914299 23.0548742127337 0.0246666666666666 0.338 0.846064128933997 0.00494894444631713 0.203653329536502 4.56228614219631 P12956 XRCC6 P12956.S324.p_XRCC6 P12956_S324s _1_1_324_324 P12956 P12956|P12956-2|B1AHC9 X-ray repair cross-complementing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4067.4067.3 9.25 9.25 9.254 3 1 1 0 425.8851 1195.6745 S324s TMT10 318 (K) RSQIYGsR (Q) RS(0.0)QIY(0.0)GS(0.99)R s:Phosphorylated S XRCC6 70127.1 2 10 815.1 220.5 HUMAN 1 0.726 23.0549 KRSRGPKSDDDGFEI-p Q8IY81;S644-p KRSRGPKSDDDGFEI 0.852956540302423 0.379412968702768 -0.029 -0.102 1.33766802016796 5.59330621020362 -0.029 -0.102 0.734908377309503 0.275847707488342 -0.356558344912578 -1.21148925241873 Q8IY81 FTSJ3 Q8IY81.S644.p_FTSJ3 Q8IY81_S644s _1_1_644_644 Q8IY81 Q8IY81 pre-rRNA processing protein FTSJ3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24554.24554.4 16.57 14.73 99 1 1 1 0 699.8627 2716.4648 S644s TMT10 641 (R) GPKsDDDGFEIVPIEDPAK (H) GPKS(1.0)DDDGFEIVPIEDPAK K:TMT10,s:Phosphorylated S FTSJ3 96956.1 6 5 631.1 257.01 HUMAN 1 -1.3377 -5.5933 KRSRKSPSPGRRNPE-p Q9HCG8;S93-p KRSRKSPSPGRRNPE 0.930700890442808 0.191592734526852 -0.016 0.2 0.619599978967419 9.43689283812195 -0.016 0.2 0.86704173377424 0.11384414930186 -0.175534075716427 1.883308579831 Q9HCG8 CWC22 Q9HCG8.S93.p_CWC22 Q9HCG8_S91sS93s_2_2_91_93 Q9HCG8 Q9HCG8 Pre-mRNA-splicing factor CWC22 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3234.3234.3 7.73 4.43 1.895 3 2 2 0 454.2164 1200.701 S91s S93s Hydrogen 88 (R) SRKsPsPGR (R) S(0.0)RKS(0.99)PS(0.99)PGR K:TMT10-Lys-Only,s:Phosphorylated S CWC22 106034.9 19 8 1128.1 174.64 HUMAN 1 -0.6196 9.4369 KRSRSRASPATHRRS-p Q9UQ35;S1869-p KRSRSRASPATHRRS 0.0504559037882092 0.00611937275099126 0.73 0.523 28.6102922395192 31.905650877719 0.73 0.523 0.00137711679871076 0.000644814674164962 6.02019490280095 7.02146749147833 Q9UQ35 SRRM2 Q9UQ35.S1869.p_SRRM2 Q9UQ35_S1869s _1_1_1869_1869 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.1595.1738.3 12.01 7.19 1.695 3 1 1 0 431.221 1211.6806 S1869s TMT10 1866 (R) SRAsPATHR (R) S(0.0)RAS(0.99)PAT(0.0)HR s:Phosphorylated S SRRM2 300351.7 8 121 2.1 3310.34 HUMAN 1 28.6103 31.9057 KRSSRPASASSSTKD-p Q14686;S2043-p KRSSRPASASSSTKD 0.0428370985731628 0.235038811251668 0.826333333333333 0.123333333333333 30.5549833684725 8.28181319227081 0.826333333333334 0.123333333333333 0.000880038481832881 0.148531538926155 6.60277176646937 1.68346212432529 Q14686 NCOA6 Q14686.S2043.p_NCOA6 Q14686_S2043s _1_1_2043_2043 Q14686 Q14686|F6M2K2 Nuclear receptor coactivator 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3461.3461.3 10.84 10.84 2.21 7 1 1 0 568.629 1623.9066 S2043s TMT10 2038 (R) SSRPAsASSSTK (D) S(0.0)S(0.0)RPAS(0.99)AS(0.0)S(0.0)S(0.0)T(0.0)K K:TMT10,s:Phosphorylated S NCOA6 219484.1 1 15 327.1 360.02 HUMAN 1 30.555 8.2818 KRSSRRQSLELQKCE-p Q9UIG0;S1342-p KRSSRRQSLELQKCE 0.95203035388902 0.0152876919042352 -0.013 -0.456333333333333 0.423795035529407 25.1163815359127 -0.013 -0.456333333333333 0.907027587493467 0.00307866083168647 -0.122363004599202 -5.0669505590141 Q9UIG0 BAZ1B Q9UIG0.S1342.p_BAZ1B Q9UIG0_S1342s _1_1_1342_1342 Q9UIG0 Q9UIG0|Q9UIG0-2 Tyrosine-protein kinase BAZ1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15354.15354.4 12.58 6.4 99 1 1 1 0 670.3721 2598.5005 S1342s TMT10 1340 (R) RQsLELQKCEEILHK (I) RQS(1.0)LELQKCEEILHK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BAZ1B 172497.3 2 11 370.1 339.44 HUMAN 1 -0.4238 -25.1164 KRSTPRMSPQAREDQ-p O95707;S43-p KRSTPRMSPQAREDQ 0.76632795784538 0.542638341127832 -0.0626666666666667 0.126333333333333 2.21686402930475 3.57283287163465 -0.0626666666666667 0.126333333333333 0.600224332162267 0.439254999095987 -0.556309977329007 0.834411065769525 O95707 POP4 O95707.S43.p_POP4 O95707_S43s _1_1_43_43 O95707 O95707 Ribonuclease P protein subunit p29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7206.7206.3 13.49 7.92 99 1 1 1 0 589.9524 1687.8747 S43s TMT10 42 (R) MsPQAREDQLQR (K) MS(1.0)PQAREDQLQR s:Phosphorylated S POP4 25595.4 3 2 4118.1 37.23 HUMAN 1 -2.2169 3.5728 KRSVSTRSPHQLLSP-p Q14181;S141-p KRSVSTRSPHQLLSP 0.424703032265256 0.364930916564215 0.123666666666667 -0.086 6.85373273368535 5.80353435889612 0.123666666666667 -0.086 0.206360573725091 0.26281283079378 1.43538482234349 -1.2491965340609 Q14181 POLA2 Q14181.S141.p_POLA2 Q14181_S141s _1_1_141_141 Q14181 Q14181 DNA polymerase alpha subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17128.17128.4 11.37 11.37 1.129 8 1 1 0 598.801 2312.2084 S141s Hydrogen 141 (R) sPHQLLSPSSFSPSATPSQK (Y) S(0.99)PHQLLS(0.0)PS(0.0)S(0.0)FS(0.0)PS(0.0)AT(0.0)PS(0.0)QK K:TMT10-Lys-Only,s:Phosphorylated S POLA2 66802.4 9 3 2066.1 99.64 HUMAN 1 6.8537 -5.8035 KRSWGHESPEERHSG-p Q9UKJ3;S1014-p KRSWGHESPEERHSG 0.171158122502722 0.0754597079475366 0.240666666666667 0.273 15.2849933834597 14.8971979054486 0.240666666666667 0.273 0.0296142447716465 0.0323802508904678 2.93207479399674 2.85734381920064 Q9UKJ3 GPATCH8 Q9UKJ3.S1014.p_GPATCH8 Q9UKJ3_S1014s _1_1_1014_1014 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5608.5608.3 14.69 14.69 7.383 2 1 1 0 508.2223 1442.6862 S1014s TMT10 1009 (R) SWGHEsPEER (H) S(0.0)WGHES(0.99)PEER s:Phosphorylated S GPATCH8 165107.3 6 11 231.1 422.52 HUMAN 1 15.285 14.8972 KRSYPTNSLTRSHQA-p Q9H2E6-2;S941-p KRSYPTNSLTRSHQA 0.574498176987848 0.451376038979078 0.118333333333333 -0.0816666666666666 4.42955945900815 4.60483385678951 0.118333333333333 -0.0816666666666666 0.36061522136575 0.346351134325034 0.998400107447081 -1.03092242044573 Q9H2E6 SEMA6A Q9H2E6.2.S941.p_SEMA6A Q9H2E6-2_S941s _1_1_941_941 Q9H2E6-2 Q9H2E6-2|A0A0A0MQU6|B3KU01|E9PDV9 Isoform 2 of Semaphorin-6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8675.8675.2 10.79 6.52 2.386 5 1 1 0 674.3308 1267.6844 S941s TMT10 936 (R) SYPTNsLTR (S) S(0.0)Y(0.0)PT(0.0)NS(0.99)LT(0.0)R s:Phosphorylated S SEMA6A 117646 1 5 3856.1 41.63 HUMAN 1 4.4296 -4.6048 KRTCPSLSPTSPLNN-p O75925-2;S487-p KRTCPSLSPTSPLNN 0.260386657049657 0.419192834061291 0.177 -0.0833333333333333 11.0811663023369 5.02520423909862 0.177 -0.0833333333333333 0.0779620714456033 0.314397856241729 2.17033511594261 -1.10844993471756 O75925 PIAS1 O75925.2.S487.p_PIAS1 O75925-2_S487s _1_1_487_487 O75925-2 O75925-2 Isoform 2 of E3 SUMO-protein ligase PIAS1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13500.13706.3 13.58 8.98 1.608 5 1 1 0 737.3863 2130.1741 S487s TMT10 481 (K) RTCPSLsPTSPLNNK (G) RT(0.0)CPS(0.0)LS(0.99)PT(0.0)S(0.0)PLNNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PIAS1 73172.1 4 1 3137.1 59.72 HUMAN 1 11.0812 -5.0252 KRTEARSSDEENGPP-p Q96B36-3;S223-p KRTEARSSDEENGPP 0.428800530001446 0.0235106314047309 0.106333333333333 0.307333333333333 6.77125039893037 22.2130303352099 0.106333333333333 0.307333333333333 0.21031728175982 0.00600754408527395 1.4209093482806 4.36613983977205 Q96B36 AKT1S1 Q96B36.3.S223.p_AKT1S1 Q96B36-3_S222sS223s_2_2_222_223 Q96B36-3 Q96B36-3|Q96B36-2 Isoform 3 of Proline-rich AKT1 substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8840.8840.3 12.44 12.44 2.621 5 2 2 0 850.0219 2388.1113 S222s S223s TMT10 218 (R) TEARssDEENGPPSSPDLDR (I) T(0.0)EARS(0.99)S(0.99)DEENGPPS(0.0)S(0.0)PDLDR s:Phosphorylated S AKT1S1 29490.1 16 8 1393.1 146.92 HUMAN 1 6.7713 22.213 KRTGSDHTNPTSPLL-p Q96D71;T478-p KRTGSDHTNPTSPLL 0.171158122502722 0.181752681670889 -0.27 0.178333333333333 15.2863252630558 9.74112854769876 -0.27 0.178333333333333 0.0296051641679171 0.106141970326461 -2.93232621792887 1.93600850523476 Q96D71 REPS1 Q96D71.T478.p_REPS1 Q96D71_T478t _1_1_478_478 Q96D71 Q96D71|Q96D71-3|Q96D71-4|E9PMG1 RalBP1-associated Eps domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21616.21616.4 21.56 21.56 1.121 6 1 1 0 879.725 3435.9051 T478t TMT10 472 (K) RTGSDHtNPTSPLLVKPSDLLEENK (I) RT(0.0)GS(0.0)DHT(0.99)NPT(0.0)S(0.0)PLLVKPS(0.0)DLLEENK K:TMT10,t:Phosphorylated T REPS1 86831.7 4 27 226.1 425.21 HUMAN 1 -15.2863 9.7411 KRTKASMSEFLESED-p Q15022;S541-p KRTKASMSEFLESED 0.414816539791492 0.357320438642768 0.154666666666667 0.105666666666667 7.04887620439924 5.92856959155911 0.154666666666667 0.105666666666667 0.197293319316609 0.255354220832062 1.46956605070264 1.2715292668838 Q15022 SUZ12 Q15022.S541.p_SUZ12 Q15022_S541s _1_1_541_541 Q15022 Q15022 Polycomb protein SUZ12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24132.24132.3 14.9 14.9 1.147 3 1 1 0 794.011 2300.055 S541s TMT10 538 (K) ASMsEFLESEDGEVEQQR (T) AS(0.0)MS(0.99)EFLES(0.0)EDGEVEQQR s:Phosphorylated S SUZ12 83795 1 2 1074.1 180.59 HUMAN 1 7.0489 5.9286 KRTPRSESVEGFLSP-p Q08AD1;S1313-p KRTPRSESVEGFLSP 0.749785080429571 0.328084144735486 0.0486666666666667 0.1 2.3793082941398 6.40969058195421 0.0486666666666667 0.1 0.578188128766678 0.228576164926413 0.591255342812052 1.35688944948704 Q08AD1 CAMSAP2 Q08AD1.S1313.p_CAMSAP2 Q08AD1_S1313s _1_1_1313_1313 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19013.19013.2 10.39 10.39 1.472 4 1 1 0 802.3838 1523.7903 S1313s TMT10 1311 (R) SEsVEGFLSPSR (C) S(0.0)ES(0.99)VEGFLS(0.0)PS(0.0)R s:Phosphorylated S CAMSAP2 169284 2 24 28.2 931.95 HUMAN 1 2.3793 6.4097 KRTQIVYSDDVYKEN-p P18615-3;S375-p KRTQIVYSDDVYKEN 0.537243068570589 0.035676105191951 0.093 -0.302333333333333 4.98728525591562 19.4857448154192 0.093 -0.302333333333333 0.317154935661241 0.01125707393422 1.10172753671601 -3.76603556798975 P18615 NELFE P18615.3.S375.p_NELFE P18615-3_S375s _1_1_375_375 P18615-3 P18615-3|P18615-4 Isoform 2 of Negative elongation factor E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28970.28970.3 15.68 15.68 6.275 4 1 1 0 881.7703 2563.3332 S375s TMT10 370 (R) TQIVYsDDVYKENLVDGF (-) T(0.0)QIVY(0.0)S(0.99)DDVY(0.0)KENLVDGF K:TMT10,s:Phosphorylated S NELFE 44038 2 10 611.1 261.65 HUMAN 1 4.9873 -19.4857 KRTSKYFSLDLTHDE-p Q96NE9;S609-p KRTSKYFSLDLTHDE 0.193492390933739 0.111785379524978 0.298 0.231666666666667 13.9273075520052 12.5603800380292 0.298 0.231666666666667 0.0404826789952912 0.05545771814546 2.67958171368898 2.43086310321824 Q96NE9 FRMD6 Q96NE9.S609.p_FRMD6 Q96NE9_S609s _1_1_609_609 Q96NE9 Q96NE9|Q96NE9-2|G3V4T7 FERM domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.36902.36902.3 18.79 15.5 2.652 3 1 1 0 740.3558 2139.0848 S609s TMT10 607 (K) YFsLDLTHDEVPEFVV (-) Y(0.0)FS(0.99)LDLT(0.0)HDEVPEFVV s:Phosphorylated S FRMD6 72898.5 2 7 1456.1 140.48 HUMAN 1 13.9273 12.5604 KRTSSPRSPPSSSEI-p I3L317;S21-p KRTSSPRSPPSSSEI 0.456411337786712 0.484872286844972 0.12 -0.0733333333333333 6.27942057297983 4.19773941516493 0.12 -0.0733333333333333 0.235536351082717 0.380387343597926 1.33419120496544 -0.954576332317713 I3L317 NotFound I3L317.S21.p_NotFound I3L317_S21s _1_1_21_21 I3L317 I3L4Q0|I3L317|C9JLW8|I3L2L5|I3L3A7 Mapk-regulated corepressor-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11118.11118.3 20.72 15.8 2.294 8 1 1 0 941.1162 2741.3692 S21s TMT10 16 (R) TSSPRsPPSSSEIFTPAHEENVR (F) T(0.0)S(0.0)S(0.0)PRS(0.99)PPS(0.0)S(0.0)S(0.0)EIFT(0.0)PAHEENVR s:Phosphorylated S MCRIP1 12911.2 9 2 3225.1 56.73 HUMAN 1 6.2794 -4.1977 KRTSSTCSNESLSVG-p O60343-2;S691-p KRTSSTCSNESLSVG 0.0370606253912864 0.0139668836897806 0.57 0.415 32.7270391551126 25.7414716523753 0.57 0.415 0.000533698625716207 0.00266595512460422 7.30669608327482 5.22727548592641 O60343 TBC1D4 O60343.2.S691.p_TBC1D4 O60343-2_S691s _1_1_691_691 O60343-2 O60343|O60343-3|O60343-2 Isoform 2 of TBC1 domain family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12589.12589.3 15.56 15.56 2 10 1 1 0 779.3597 2256.0975 S691s TMT10 686 (R) TSSTCsNESLSVGGTSVTPR (R) T(0.0)S(0.0)S(0.0)T(0.0)CS(0.99)NES(0.0)LS(0.0)VGGT(0.0)S(0.0)VT(0.0)PR C:Carbamidomethylation,s:Phosphorylated S TBC1D4 141150.8 2 14 603.1 262.97 HUMAN 1 32.727 25.7415 KRTVSDNSLSNSRGE-p Q96RU3;S299-p KRTVSDNSLSNSRGE 0.980699778242646 0.699613513215301 0.00433333333333333 -0.0433333333333333 0.168021368180074 2.13286120316865 0.00433333333333333 -0.0433333333333333 0.962050485688681 0.611947098121403 0.0498234281088132 -0.537964115999699 Q96RU3 FNBP1 Q96RU3.S299.p_FNBP1 Q96RU3_S296sS299s_2_2_296_299 Q96RU3 Q96RU3|Q96RU3-2|Q96RU3-5|Q96RU3-3|Q96RU3-4|B7ZL14 Formin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8087.8087.2 7.51 7.51 2.792 5 2 2 0 784.831 1408.723 S296s S299s TMT10 294 (R) TVsDNsLSNSR (G) T(0.0)VS(0.99)DNS(0.99)LS(0.0)NS(0.0)R s:Phosphorylated S FNBP1 71762 8 7 1764.1 116.78 HUMAN 1 0.168 -2.1329 KRTVSQQSFDGVSLD-p Q6BDS2;S1106-p KRTVSQQSFDGVSLD 0.197485486626468 0.128610683333892 0.221666666666667 -0.157666666666667 13.7344750181226 11.745677698772 0.221666666666667 -0.157666666666667 0.0423206664499962 0.0669009415717734 2.6442957698955 -2.28619209453862 Q6BDS2 UHRF1BP1 Q6BDS2.S1106.p_UHRF1BP1 Q6BDS2_S1106s _1_1_1106_1106 Q6BDS2 Q6BDS2|H7C1J4 UHRF1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14536.14536.3 11.06 11.06 1.592 6 1 1 0 859.4009 2496.2164 S1106s TMT10 1100 (K) RTVSQQsFDGVSLDSSGPEDR (I) RT(0.0)VS(0.0)QQS(0.99)FDGVS(0.0)LDS(0.0)S(0.0)GPEDR s:Phosphorylated S UHRF1BP1 160680.5 3 30 398.2 328.88 HUMAN 1 13.7345 -11.7457 KRVCSSDSDSSLQVV-p Q9NSI6-2;S1907-p KRVCSSDSDSSLQVV 0.142649920513493 0.053692037920112 0.429666666666667 -0.345666666666667 17.2751901774564 16.932477745063 0.429666666666667 -0.345666666666667 0.0187275507331921 0.0202652621209246 3.31703392228269 -3.24688569923939 Q9NSI6 BRWD1 Q9NSI6.2.S1907.p_BRWD1 Q9NSI6-2_S1904sS1905sS1907s_3_3_1904_1907 Q9NSI6-2 Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17433.17433.3 11.01 11.01 3.242 5 3 3 0 779.679 2097.1262 S1904s S1905s S1907s Hydrogen 1902 (R) VCssDsDSSLQVVKK (S) VCS(0.99)S(0.99)DS(0.99)DS(0.0)S(0.0)LQVVKK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S BRWD1 259915.1 1 37 208.1 444.81 HUMAN 1 17.2752 -16.9325 KRVGRNQSPPVGYMS-p Q9H7U1-3;S908-p KRVGRNQSPPVGYMS 0.931074993503674 0.11219674479053 0.0173333333333333 -0.177333333333333 0.614777642713046 12.5362926402389 0.0173333333333333 -0.177333333333333 0.868005017714252 0.0557661594251303 0.17424696472235 -2.42656038711876 Q9H7U1 CCSER2 Q9H7U1.3.S908.p_CCSER2 Q9H7U1-3_S908s _1_1_908_908 Q9H7U1-3 Q9H7U1-3 Isoform 3 of Serine-rich coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14117.14117.2 14.47 11.01 5.28 3 1 1 0 985.9922 1891.0148 S908s TMT10 906 (R) NQsPPVGYMSQPK (S) NQS(0.99)PPVGY(0.0)MS(0.0)QPK K:TMT10,s:Phosphorylated S CCSER2 117824 4 5 2789.1 70.56 HUMAN 1 0.6148 -12.5363 KRVLLQASQDENFGN-p P57740;S37-p KRVLLQASQDENFGN 0.378389324662461 0.0689517361438301 0.142666666666667 -0.244 7.79868830658393 15.4450999072668 0.142666666666667 -0.244 0.166008822580149 0.0285423685274443 1.60021786612107 -2.96035189782154 P57740 NUP107 P57740.S37.p_NUP107 P57740_S37s _1_1_37_37 P57740 P57740|G3V1T4 Nuclear pore complex protein Nup107 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19896.19896.3 18.54 18.54 8.789 3 1 1 0 733.6939 2119.0981 S37s TMT10 32 (R) VLLQAsQDENFGNTTPR (N) VLLQAS(0.99)QDENFGNT(0.0)T(0.0)PR s:Phosphorylated S NUP107 107113.9 2 2 1162.1 171.06 HUMAN 1 7.7987 -15.4451 KRVPPEKSPIIEAFM-p Q8IX21-2;S109-p KRVPPEKSPIIEAFM 0.993752696482329 0.00383473386221413 0.00166666666666665 -0.739333333333333 0.0549545968810916 35.7763542435376 0.00166666666666666 -0.739333333333333 0.98742595869264 0.000264462790213492 0.0165010964321781 -8.38445422445032 Q8IX21 SLF2 Q8IX21.2.S109.p_SLF2 Q8IX21-2_S109s _1_1_109_109 Q8IX21-2 Q8IX21-2 Isoform 2 of SMC5-SMC6 complex localization factor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23389.23389.4 9.99 9.99 99 1 1 1 0 628.1112 2429.4557 S109s TMT10 103 (K) RVPPEKsPIIEAFMK (G) RVPPEKS(1.0)PIIEAFMK K:TMT10,s:Phosphorylated S SLF2 134456.8 1 3 1220.1 164.91 HUMAN 1 0.055 -35.7764 KRVREAQSFISAAIE-p Q8WXA9-2;S287-p KRVREAQSFISAAIE 0.0866557243462627 0.260070263599723 0.374 0.192666666666667 22.6979918215887 7.70576003087394 0.374 0.192666666666667 0.00537280177384075 0.169599277148764 4.48339359681975 1.58358979773481 Q8WXA9 SREK1 Q8WXA9.2.S287.p_SREK1 Q8WXA9-2_S287s _1_1_287_287 Q8WXA9-2 Q8WXA9-2 Isoform 2 of Splicing regulatory glutamine/lysine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25303.25303.3 18.28 16.57 3.889 3 1 1 0 734.7085 2122.1432 S287s TMT10 284 (R) EAQsFISAAIEPESGK (S) EAQS(0.99)FIS(0.0)AAIEPES(0.0)GK K:TMT10,s:Phosphorylated S SREK1 71819.3 1 1 1303.1 156.21 HUMAN 1 22.698 7.7058 KRVTNDISPESSPGV-p E7ETA6;S65-p KRVTNDISPESSPGV 0.294929222562145 0.168759039716975 0.176333333333333 -0.211 10.002622538677 10.1636784736876 0.176333333333333 -0.211 0.099939632044153 0.0963013006200489 1.98216608213826 -2.0093343058428 E7ETA6 PCM1 E7ETA6.S65.p_PCM1 E7ETA6_S65s _1_1_65_65 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6|Q15154-3|E9PGW9 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11876.11876.3 15.78 15.78 2.209 4 1 1 0 608.6287 1743.9075 S65s TMT10 60 (R) VTNDIsPESSPGVGR (R) VT(0.0)NDIS(0.99)PES(0.0)S(0.0)PGVGR s:Phosphorylated S PCM1 229381.8 18 2 13.1 1159.95 HUMAN 1 10.0026 -10.1637 KRVYKQASLDEKQLA-p Q9UPX8-3;S149-p KRVYKQASLDEKQLA 0.975009344981545 0.185931672130157 0.00466666666666665 0.203666666666667 0.212847367642391 9.60871489476249 0.00466666666666665 0.203666666666667 0.952171686411243 0.109428012287847 0.0628113024419388 1.91306380157692 Q9UPX8 SHANK2 Q9UPX8.3.S149.p_SHANK2 Q9UPX8-3_S149s _1_1_149_149 Q9UPX8-3 Q9UPX8-3 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8888.8888.2 11.5 3.71 99 1 1 1 0 664.8465 1248.72 S149s TMT10 147 (K) QAsLDEK (Q) QAS(1.0)LDEK K:TMT10,s:Phosphorylated S SHANK2 202341.2 1 3 86.1 628.23 HUMAN 1 0.2128 9.6087 KRVYLSDSDNNSLET-p Q9NSI6-2;S1607-p KRVYLSDSDNNSLET 0.534390357489892 0.966795771256058 0.0853333333333333 -0.00499999999999997 5.03857734863668 0.207625711504738 0.0853333333333333 -0.00499999999999998 0.313431228660762 0.953317200222275 1.11112294380219 -0.0612990639563365 Q9NSI6 BRWD1 Q9NSI6.2.S1607.p_BRWD1 Q9NSI6-2_S1605sS1607s_2_2_1605_1607 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25774.25774.2 13.83 11.14 3.315 5 2 2 0 1193.5421 2226.1339 S1605s S1607s Hydrogen 1602 (R) VYLsDsDNNSLETGEILK (A) VY(0.0)LS(0.99)DS(0.99)DNNS(0.0)LET(0.0)GEILK K:TMT10-Lys-Only,s:Phosphorylated S BRWD1 259915.1 8 30 208.1 444.81 HUMAN 1 5.0386 -0.2076 KRWSGNESTDEFSEL-p O75427;S317-p KRWSGNESTDEFSEL 0.392704789566549 0.410075307098328 0.119666666666667 -0.111 7.48644242922132 5.15061518447183 0.119666666666667 -0.111 0.178383942069557 0.305448840982865 1.54592200394055 -1.13135429209903 O75427 LRCH4 O75427.S317.p_LRCH4 O75427_S317s _1_1_317_317 O75427 O75427 Leucine-rich repeat and calponin homology domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20351.20351.3 15.98 15.98 1.136 5 1 1 0 786.0198 2276.0781 S317s TMT10 311 (K) RWSGNEsTDEFSELSFR (I) RWS(0.0)GNES(0.99)T(0.0)DEFS(0.0)ELS(0.0)FR s:Phosphorylated S LRCH4 74133.6 1 4 1458.1 140.35 HUMAN 1 7.4864 -5.1506 KRYRNEGSPSPRQSP-p Q5T200;S831-p KRYRNEGSPSPRQSP 0.189541436229745 0.0134863168096769 0.261333333333333 -0.794333333333333 14.1330908319663 26.0014636009894 0.261333333333333 -0.794333333333333 0.0386092101225512 0.00251104005187459 2.71738705932013 -5.29501431512342 Q5T200 ZC3H13 Q5T200.S831.p_ZC3H13 Q5T200_S831s _1_1_831_831 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3814.3814.3 10.24 10.24 1.36 3 1 1 0 491.2346 1391.7229 S831s TMT10 826 (R) YRNEGsPSPR (Q) Y(0.0)RNEGS(0.99)PS(0.0)PR s:Phosphorylated S ZC3H13 197316.7 1 14 24.1 987.82 HUMAN 1 14.1331 -26.0015 KSAAALLSPIKTLTT-p Q12955;S1854-p KSAAALLSPIKTLTT 0.712330814255611 0.00203690866710184 0.0593333333333333 -1.30933333333333 2.77103010216854 41.9266826179859 0.0593333333333334 -1.30933333333333 0.52831992482074 6.41699555119271e-05 0.673509454175217 -11.032838860644 Q12955 ANK3 Q12955.S1854.p_ANK3 Q12955_S1854s _1_1_1854_1854 Q12955 Q12955 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23011.23011.3 11.91 7.48 11.913 2 1 1 0 503.6343 1428.919 S1854s TMT10 1848 (K) SAAALLsPIK (T) S(0.0)AAALLS(0.99)PIK K:TMT10,s:Phosphorylated S ANK3 482683.6 1 19 135.1 530.51 HUMAN 1 2.771 -41.9267 KSAEDYNSSNALNVK-p Q13153-2;S155-p KSAEDYNSSNALNVK 0.0821409724815468 0.0199274763775543 -0.384333333333333 -0.339666666666667 23.2038380300276 23.3177631089312 -0.384333333333333 -0.339666666666667 0.00478207295057385 0.00465825961555845 -4.60278059048242 -4.62467830794373 Q13153 PAK1 Q13153.2.S155.p_PAK1 Q13153-2_S155s _1_1_155_155 Q13153-2 Q13153-2|B3KNX7|E9PM17 Isoform 2 of Serine/threonine-protein kinase PAK 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13535.13535.2 18.04 18.04 1.179 4 1 1 0 1025.499 1970.0231 S155s TMT10 149 (K) SAEDYNsSNALNVK (A) S(0.0)AEDY(0.0)NS(0.99)S(0.0)NALNVK K:TMT10,s:Phosphorylated S PAK1 62087.3 3 4 272.2 393.22 HUMAN 1 -23.2038 -23.3178 KSAEPPRSPLLKRVQ-p Q6P0Q8;S1399-p KSAEPPRSPLLKRVQ 0.763136578864987 0.0122597983417663 0.0483333333333333 -0.395 2.24931661100619 26.690030803736 0.0483333333333333 -0.395 0.595755881994259 0.00214287540203165 0.563333484315674 -5.47749561290135 Q6P0Q8 MAST2 Q6P0Q8.S1399.p_MAST2 Q6P0Q8_S1399s _1_1_1399_1399 Q6P0Q8 O15021|J3QT34|O15021-1|E7EWQ5|O15021-3|O15021-2|Q6P0Q8|Q6P0Q8-2|Q9Y2H9 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12181.12181.3 12.24 12.24 3.939 2 1 1 0 578.3314 1653.01 S1399s TMT10 1393 (K) SAEPPRsPLLK (R) S(0.0)AEPPRS(0.99)PLLK K:TMT10,s:Phosphorylated S MAST2 197687.5 3 61 121.1 549.41 HUMAN 1 2.2493 -26.69 KSAILVPSEKKVAII-p P11137;S1640-p KSAILVPSEKKVAII 0.92503534198716 0.0305734869274183 0.0143333333333333 -0.336 0.666504202268024 20.4689370618717 0.0143333333333333 -0.336 0.857727984574158 0.0089764846757225 0.187996900256875 -3.97648706555624 P11137 MAP2 P11137.S1640.p_MAP2 P11137_S1640s _1_1_1640_1640 P11137 P11137|P11137-3|P11137-4|P11137-2 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18224.18224.3 10.92 12.04 9.268 2 1 1 0 494.6181 1401.8717 S1640s TMT10 1634 (K) SAILVPsEK (K) S(0.0)AILVPS(0.99)EK K:TMT10,s:Phosphorylated S MAP2 199979.2 3 17 117.1 560.28 HUMAN 1 0.6665 -20.4689 KSAKDGTSPEEEIEI-p Q9H501;S694-p KSAKDGTSPEEEIEI 0.346992405472225 0.387291051397828 -0.155666666666667 -0.0893333333333333 8.54056540248134 5.47679364221784 -0.155666666666667 -0.0893333333333334 0.139940512393342 0.283348315933823 -1.72883051101136 -1.19049948509363 Q9H501 ESF1 Q9H501.S694.p_ESF1 Q9H501_S694s _1_1_694_694 Q9H501 Q9H501 ESF1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14219.14219.2 13.14 8.47 1.391 2 1 1 0 906.9101 1732.8439 S694s TMT10 691 (K) DGTsPEEEIEIER (Q) DGT(0.0)S(0.99)PEEEIEIER s:Phosphorylated S ESF1 99193.8 3 10 500.1 291.39 HUMAN 1 -8.5406 -5.4768 KSAKKPQSSSTEPAR-p Q7Z4V5-4;S418-p KSAKKPQSSSTEPAR 0.406758889691054 0.263939163059504 0.125 -0.134666666666667 7.21421299763292 7.62144366733489 0.125 -0.134666666666667 0.189923497887122 0.172924143495184 1.49846042674457 -1.56894089138165 Q7Z4V5 HDGFRP2 Q7Z4V5.4.S418.p_HDGFRP2 Q7Z4V5-4_S418s _1_1_418_418 Q7Z4V5-4 Q7Z4V5-3|Q7Z4V5-4|Q7Z4V5-2 Isoform 4 of Hepatoma-derived growth factor-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5403.5403.5 8.58 8.58 1.102 4 1 1 0 545.3143 2642.576 S418s TMT10 415 (K) KPQsSSTEPARKPGQK (E) KPQS(0.99)S(0.0)S(0.0)T(0.0)EPARKPGQK K:TMT10,s:Phosphorylated S HDGFL2 74899.1 3 7 712.1 238.42 HUMAN 1 7.2142 -7.6214 KSAKKVKTPQPKKAA-p P16402;T180-p KSAKKVKTPQPKKAA 0.47212800410265 0.00264930192085164 -0.138333333333333 -0.799666666666667 6.01288099306225 39.2089501191521 -0.138333333333333 -0.799666666666667 0.250444731870031 0.000119978930995998 -1.28685791742836 -9.78118674181362 P16402 HIST1H1D P16402.T180.p_HIST1H1D P16402_T180t _1_1_180_180 P16402 P16402 Histone H1.3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7648.7648.2 9.8 6.02 99 1 1 1 0 782.9747 1484.9768 T180t TMT10 178 (K) VKtPQPK (K) VKT(1.0)PQPK K:TMT10,t:Phosphorylated T HIST1H1D 22349.5 6 24 738.1 234.77 HUMAN 1 -6.0129 -39.209 KSARRSASASHQADI-p Q14739;S99-p KSARRSASASHQADI 0.806595725807555 0.0181330565646401 0.0356666666666667 -0.493666666666667 1.79772268887271 23.979888115147 0.0356666666666667 -0.493666666666667 0.661039986855656 0.00399955053446222 0.463525228187985 -4.78431119384544 Q14739 LBR Q14739.S99.p_LBR Q14739_S99s _1_1_99_99 Q14739 Q14739 Lamin-B receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5681.5681.2 15.31 9.74 2.164 3 1 1 0 826.9243 1572.8746 S99s TMT10 97 (R) SAsASHQADIK (E) S(0.0)AS(0.99)AS(0.0)HQADIK K:TMT10,s:Phosphorylated S LBR 71101.3 15 4 1716.1 119.76 HUMAN 1 1.7977 -23.9799 KSASRPGSRAGSRAG-p H3BQK9;S7518-p KSASRPGSRAGSRAG 0.123551849312534 0.0933833703851353 0.386666666666667 0.302666666666667 18.8857539170817 13.6190782811785 0.386666666666667 0.302666666666667 0.0129248231179973 0.043460245162802 3.64379631797492 2.62172169625287 H3BQK9 NotFound H3BQK9.S7518.p_NotFound H3BQK9_S7518s _1_1_7518_7518 H3BQK9 H3BQK9|H3BPE1|Q9UPN3|Q9UPN3-5|Q9UPN3-2|Q9UPN3-3|Q9UPN3-4 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.2855.2855.3 7.14 3.75 3.542 3 1 1 0 376.1906 1046.5904 S7518s TMT10 7512 (K) SASRPGsR (A) S(0.0)AS(0.0)RPGS(0.99)R s:Phosphorylated S MACF1 866539.7 1 14 472.1 301.95 HUMAN 1 18.8858 13.6191 KSAVLCYSPSDRQSW-p Q86XL3;S866-p KSAVLCYSPSDRQSW 0.322888488875434 0.00157953236888053 -0.140666666666667 -0.917333333333333 9.19283956407852 45.0308118034448 -0.140666666666667 -0.917333333333333 0.120424830467315 3.13992171024708e-05 -1.84174958612985 -12.643289925795 Q86XL3 ANKLE2 Q86XL3.S866.p_ANKLE2 Q86XL3_S866s _1_1_866_866 Q86XL3 Q86XL3|Q86XL3-3 Ankyrin repeat and LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20526.20526.3 19.1 14.36 2 6 1 1 0 925.1311 2693.4121 S866s TMT10 860 (K) SAVLCYsPSDRQSWPSPAVK (G) S(0.0)AVLCY(0.0)S(0.99)PS(0.0)DRQS(0.0)WPS(0.0)PAVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANKLE2 104968.3 4 10 897.1 204.02 HUMAN 1 -9.1928 -45.0308 KSAYNSYSWGAN___-p Q14157-5;S1100-p KSAYNSYSWGAN___ 0.427414948238645 0.264550314752512 0.127666666666667 0.111666666666667 6.79855036341683 7.60508141717381 0.127666666666667 0.111666666666667 0.208999363583438 0.173576872211528 1.42570236861068 1.56609701604842 Q14157 UBAP2L Q14157.5.S1100.p_UBAP2L Q14157-5_S1100s _1_1_1100_1100 Q14157-5 Q14157-5 Isoform 5 of Ubiquitin-associated protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16526.16526.2 9.92 9.92 4.155 5 1 1 0 764.8191 1448.6644 S1100s TMT10 1094 (K) SAYNSYsWGAN (-) S(0.0)AY(0.0)NS(0.0)Y(0.0)S(0.99)WGAN s:Phosphorylated S UBAP2L 116866.1 2 22 189.1 467.5 HUMAN 1 6.7986 7.6051 KSCAEWVSLSKARIV-p O75947;S106-p KSCAEWVSLSKARIV 0.795947364926604 0.11901818318255 -0.0363333333333333 0.179333333333333 1.91527898574638 12.189761902735 -0.0363333333333333 0.179333333333333 0.643386733246007 0.0603981741116159 -0.489957133925051 2.36483697630726 O75947 ATP5H O75947.S106.p_ATP5H O75947_S106s _1_1_106_106 O75947 O75947|O75947-2 ATP synthase subunit d, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20489.20489.3 13.47 13.47 2.788 3 1 1 0 568.9531 1624.8769 S106s TMT10 100 (K) SCAEWVsLSK (A) S(0.0)CAEWVS(0.99)LS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATP5H 18547.9 1 2 5056.1 23.48 HUMAN 1 -1.9153 12.1898 KSDCQPNSPTESCSS-p P41182;S343-p KSDCQPNSPTESCSS 0.521338129482038 0.00190027809892951 -0.212 0.928666666666667 5.23036700792502 42.6928347842959 -0.212 0.928666666666667 0.299890908037604 5.37918550598208e-05 -1.14611141786486 11.4114738309527 P41182 BCL6 P41182.S343.p_BCL6 P41182_S343s _1_1_343_343 P41182 P41182|P41182-2 B-cell lymphoma 6 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5655.5655.3 16.21 16.21 2.778 6 1 1 0 741.3213 2141.9844 S343s TMT10 337 (K) SDCQPNsPTESCSSK (N) S(0.0)DCQPNS(0.99)PT(0.0)ES(0.0)CS(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BCL6 80670.9 2 7 557.1 273.04 HUMAN 1 -5.2304 42.6928 KSDDSKSSSPELVTH-p Q07960;S50-p KSDDSKSSSPELVTH 0.652350798817303 0.0267415898009288 -0.135333333333333 0.514 3.48009590914812 21.349926953996 -0.135333333333333 0.514 0.448735479995374 0.00732836858958409 -0.81634658424116 4.17059296560031 Q07960 ARHGAP1 Q07960.S50.p_ARHGAP1 Q07960_S50sS51s_2_2_50_51 Q07960 Q07960 Rho GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15775.15775.4 12.22 8.7 1.116 6 2 2 0 645.076 2417.3491 S50s S51s TMT10 44 (K) SDDSKSssPELVTHLK (W) S(0.0)DDS(0.0)KS(0.0)S(0.99)S(0.99)PELVT(0.0)HLK K:TMT10,s:Phosphorylated S ARHGAP1 50491.8 7 10 951.1 196.28 HUMAN 1 -3.4801 21.3499 KSDGACDSPSSDKEN-p Q9UIG0;S158-p KSDGACDSPSSDKEN 0.774525327958289 0.510190886994681 -0.115333333333333 0.095 2.12429625574919 3.91810496814663 -0.115333333333333 0.095 0.613155141661387 0.405685516576111 -0.536155714721965 0.901292218389317 Q9UIG0 BAZ1B Q9UIG0.S158.p_BAZ1B Q9UIG0_S158s _1_1_158_158 Q9UIG0 Q9UIG0 Tyrosine-protein kinase BAZ1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5324.5324.3 15.12 11.78 1.507 4 1 1 0 707.6768 2041.0475 S158s TMT10 151 (K) KSDGACDsPSSDK (E) KS(0.0)DGACDS(0.99)PS(0.0)S(0.0)DK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BAZ1B 172497.3 2 1 370.1 339.44 HUMAN 1 -2.1243 3.9181 KSDGHPETPKQKGDG-p Q6KC79;T724-p KSDGHPETPKQKGDG 0.176053518103929 0.200706981468811 0.264 -0.189666666666667 14.9915909545838 9.17584649709192 0.264 -0.189666666666667 0.0316840656541067 0.120896951590976 2.87687419729709 -1.83813171458343 Q6KC79 NIPBL Q6KC79.T724.p_NIPBL Q6KC79_T724t _1_1_724_724 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.4747.4747.5 11 7.64 1.357 3 1 1 0 632.3404 3077.715 T724t TMT10 718 (K) SDGHPEtPKQKGDGRPETPK (Q) S(0.0)DGHPET(0.99)PKQKGDGRPET(0.0)PK K:TMT10,t:Phosphorylated T NIPBL 318099.5 4 14 50.1 752.87 HUMAN 1 14.9916 -9.1758 KSDKRDDSDLVRSEL-p Q9NTI5;S1204-p KSDKRDDSDLVRSEL 0.213980230153264 0.692188763997407 -0.479666666666667 -0.084 12.9059738764662 2.19209142001724 -0.479666666666667 -0.084 0.0512156409721028 0.603657857511199 -2.49413764467895 -0.550867720028205 Q9NTI5 PDS5B Q9NTI5.S1204.p_PDS5B Q9NTI5_S1204s _1_1_1204_1204 Q9NTI5 Q9NTI5|Q9NTI5-2 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12084.12084.5 7.95 7.95 1.152 3 1 1 0 604.136 2936.6823 S1204s TMT10 1197 (K) KSDKRDDsDLVRSELEK (P) KS(0.0)DKRDDS(0.99)DLVRS(0.0)ELEK K:TMT10,s:Phosphorylated S PDS5B 165919.5 1 8 100.1 597.99 HUMAN 1 -12.906 -2.1921 KSDQMEPSPLASSLS-p Q15596;S655-p KSDQMEPSPLASSLS 0.876177453261279 0.00179932178180885 0.0343333333333333 0.888333333333333 1.12579569259881 43.2216974439878 0.0343333333333333 0.888333333333333 0.771650124761774 4.76244809700956e-05 0.305141958594256 11.679856009543 Q15596 NCOA2 Q15596.S655.p_NCOA2 Q15596_S655s _1_1_655_655 Q15596 Q15596|E7EWM1 Nuclear receptor coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19431.19431.3 12.75 12.75 2.235 6 1 1 0 815.7274 2365.1957 S655s TMT10 649 (K) SDQMEPsPLASSLSDTNK (D) S(0.0)DQMEPS(0.99)PLAS(0.0)S(0.0)LS(0.0)DT(0.0)NK K:TMT10,s:Phosphorylated S NCOA2 160009.7 2 9 290.1 381.81 HUMAN 1 1.1258 43.2217 KSDSQTPSPNEIKTE-p Q9NYD6;S210-p KSDSQTPSPNEIKTE 0.052136933831776 0.359761064708486 -0.499333333333333 -0.091 27.8858316516711 5.89029726598908 -0.499333333333333 -0.091 0.00162710970263948 0.257614481894651 -5.81379679272199 -1.26470049075894 Q9NYD6 HOXC10 Q9NYD6.S210.p_HOXC10 Q9NYD6_S210s _1_1_210_210 Q9NYD6 Q9NYD6 Homeobox protein Hox-C10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19064.19064.4 16.84 16.84 4.038 6 1 1 0 739.6378 2875.5656 S210s TMT10 196 (K) VSFPETPKSDSQTPsPNEIK (T) VS(0.0)FPET(0.0)PKS(0.0)DS(0.0)QT(0.0)PS(0.99)PNEIK K:TMT10,s:Phosphorylated S HOXC10 38585.3 4 6 634.1 256.49 HUMAN 1 -27.8858 -5.8903 KSDSRSESPEPGYVV-p Q96Q42;S1464-p KSDSRSESPEPGYVV 0.995786650245671 0.0827361607772573 0.000999999999999989 0.316666666666667 0.0342691176931189 14.3351035307481 0.000999999999999985 0.316666666666667 0.992140294335983 0.0368544256081783 0.0103140676343367 2.75295477900303 Q96Q42 ALS2 Q96Q42.S1464.p_ALS2 Q96Q42_S1464s _1_1_1464_1464 Q96Q42 Q96Q42 Alsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33756.33756.3 16.88 16.88 1.226 8 1 1 0 1055.5545 3084.6778 S1464s TMT10 1458 (K) SDSRSEsPEPGYVVTSSGLLLPVLLPR (L) S(0.0)DS(0.0)RS(0.0)ES(0.99)PEPGY(0.0)VVT(0.0)S(0.0)S(0.0)GLLLPVLLPR s:Phosphorylated S ALS2 185455.9 9 7 1001.1 189.97 HUMAN 1 0.0343 14.3351 KSDTLTDSQIDRDLH-p Q7Z333-4;S956-p KSDTLTDSQIDRDLH 0.584114561377622 0.326783240064025 0.159 -0.237 4.29799193904485 6.43109796476415 0.159 -0.237 0.371707056722203 0.227452232305582 0.973679449646895 -1.36066852637763 Q7Z333 SETX Q7Z333.4.S956.p_SETX Q7Z333-4_S956s _1_1_956_956 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17696.17696.4 16.63 16.63 1.46 5 1 1 0 869.953 3396.8214 S956s TMT10 941 (R) EQAPDISPKSDTLTDsQIDRDLHK (L) EQAPDIS(0.0)PKS(0.0)DT(0.0)LT(0.0)DS(0.99)QIDRDLHK K:TMT10,s:Phosphorylated S SETX 310728.6 3 7 192.1 463.82 HUMAN 1 4.298 -6.4311 KSDVYYFSPSGKKFR-p Q9UBB5;S181-p KSDVYYFSPSGKKFR 0.189541436229745 0.00184260569775099 -0.325 -0.983333333333333 14.131556441851 43.0297012816277 -0.325 -0.983333333333334 0.0386228534128272 4.97771321731086e-05 -2.71710458710451 -11.5817502212403 Q9UBB5 MBD2 Q9UBB5.S181.p_MBD2 Q9UBB5_S181s _1_1_181_181 Q9UBB5 Q9UBB5|Q9UBB5-3|X6RBL6 Methyl-CpG-binding domain protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17003.17003.3 16.73 9.87 3.051 5 1 1 0 715.7132 2065.1573 S181s TMT10 175 (K) SDVYYFsPSGKK (F) S(0.0)DVY(0.0)Y(0.0)FS(0.99)PS(0.0)GKK K:TMT10,s:Phosphorylated S MBD2 43596.1 2 2 2176.1 94.49 HUMAN 1 -14.1316 -43.0297 KSEAGHASSPDSEVT-p Q6NZY4;S597-p KSEAGHASSPDSEVT 0.225518171425009 0.0395666397756338 0.19 0.401 12.4259859558237 18.8095889161816 0.19 0.401 0.0572007080164345 0.0131534933141062 2.40812861481184 3.62486702289565 Q6NZY4 ZCCHC8 Q6NZY4.S597.p_ZCCHC8 Q6NZY4_S597sS598sS601s_3_3_597_601 Q6NZY4 Q6NZY4|Q6NZY4-2 Zinc finger CCHC domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14240.14240.3 8.3 8.3 2.537 6 3 3 0 1015.7917 2805.4656 S597s S598s S601s TMT10 590 (K) KSEAGHAssPDsEVTSLCQK (E) KS(0.0)EAGHAS(0.99)S(0.99)PDS(0.99)EVT(0.0)S(0.0)LCQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZCCHC8 79203.5 2 21 443.1 311.3 HUMAN 1 12.426 18.8096 KSEAKSPSNGVGSLA-p Q9NVV0;S264-p KSEAKSPSNGVGSLA 0.937455704509891 0.0294212633715952 0.014 -0.316333333333333 0.545578053320918 20.7253348671694 0.014 -0.316333333333333 0.881946405761656 0.00846187320159366 0.155655640579301 -4.03242405480251 Q9NVV0 TMEM38B Q9NVV0.S264.p_TMEM38B Q9NVV0_S264s _1_1_264_264 Q9NVV0 Q9NVV0|A0A0A0MRS4 Trimeric intracellular cation channel type B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19591.19591.4 11.73 11.73 1.234 5 1 1 0 724.6391 2815.5768 S264s TMT10 262 (K) SPsNGVGSLASKPVDVASDNVK (K) S(0.0)PS(0.99)NGVGS(0.0)LAS(0.0)KPVDVAS(0.0)DNVK K:TMT10,s:Phosphorylated S TMEM38B 32737.5 1 2 4144.1 36.76 HUMAN 1 0.5456 -20.7253 KSEEEVESDDEYLAL-p Q76N32;S478-p KSEEEVESDDEYLAL 0.923393259680252 0.0302676151002249 -0.0143333333333333 0.274666666666667 0.680731999180104 20.5490769400783 -0.0143333333333333 0.274666666666667 0.854922604356093 0.00881236153153164 -0.19175745134813 3.9939227317352 Q76N32 CEP68 Q76N32.S478.p_CEP68 Q76N32_S478s _1_1_478_478 Q76N32 Q76N32|Q76N32-2|Q5HYA6 Centrosomal protein of 68 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21921.21921.3 20.39 20.39 6.408 3 1 1 0 935.4546 2724.3769 S478s TMT10 470 (R) WKSEEEVEsDDEYLALPAR (L) WKS(0.0)EEEVES(0.99)DDEY(0.0)LALPAR K:TMT10,s:Phosphorylated S CEP68 82013.7 4 6 2056.1 100.31 HUMAN 1 -0.6807 20.5491 KSEETLLTPERLVGT-p Q6P4F7;T508-p KSEETLLTPERLVGT 0.267039324895012 0.0612925001055413 -0.193333333333333 -0.255333333333333 10.8674720607301 16.1469141255599 -0.193333333333333 -0.255333333333333 0.081894133841388 0.0242833493280933 -2.13290736896393 -3.09423907871443 Q6P4F7 ARHGAP11A Q6P4F7.T508.p_ARHGAP11A Q6P4F7_T508t _1_1_508_508 Q6P4F7 Q6P4F7|Q6P4F7-3 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20158.20158.3 15.43 10.32 3.45 5 1 1 0 763.0568 2207.1869 T508t TMT10 502 (K) SEETLLtPERLVGTNYR (M) S(0.0)EET(0.0)LLT(0.99)PERLVGT(0.0)NY(0.0)R t:Phosphorylated T ARHGAP11A 114948.2 2 5 414.1 321.53 HUMAN 1 -10.8675 -16.1469 KSEGDTQSN______-p O95232;S431-p KSEGDTQSN______ 0.336940767668124 0.0098335249867992 -0.290333333333333 0.514666666666667 8.80477907109838 28.2525792874424 -0.290333333333333 0.514666666666667 0.131680689798489 0.00149534730125117 -1.77456983989743 5.90893370038724 O95232 LUC7L3 O95232.S431.p_LUC7L3 O95232_S431s_1_1_431_431 O95232 O95232 Luc7-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11201.11580.4 19.49 19.49 1.547 7 1 1 0 838.895 3271.6017 N417n S431s TMT10 409 (K) ESDTKNEVnGTSEDIKSEGDTQsN (-) ES(0.0)DT(0.0)KN(0.0)EVN(0.99)GT(0.0)S(0.0)EDIKS(0.0)EGDT(0.0)QS(0.99)N(0.0) K:TMT10,n:Deamidated,s:Phosphorylated S LUC7L3 51864.7 13 8 1151.1 172.09 HUMAN 1 -8.8048 28.2526 KSEGKCFSVLGFCKS-p P13010;S341-p KSEGKCFSVLGFCKS 0.605650171576433 0.0134940708843181 0.0756666666666667 0.411333333333333 4.02474826996349 25.9966894346539 0.0756666666666667 0.411333333333333 0.395845008528255 0.00251380193696045 0.921857310577923 5.29376476765167 P13010 XRCC5 P13010.S341.p_XRCC5 P13010_S341s _1_1_341_341 P13010 P13010 X-ray repair cross-complementing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27181.27181.2 10 10 99 1 1 1 0 828.4086 1575.8428 S341s TMT10 339 (K) CFsVLGFCK (S) CFS(1.0)VLGFCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S XRCC5 83273.6 2 6 1948.1 105.79 HUMAN 1 4.0247 25.9967 KSEGLITSENEKCDH-p Q05209;S719-p KSEGLITSENEKCDH 0.204437813280498 0.0863267588012615 -0.448 0.249333333333333 13.3470826052775 14.0844063234367 -0.448 0.249333333333333 0.0462691732492901 0.0390444552271052 -2.57380151194406 2.70679319984224 Q05209 PTPN12 Q05209.S719.p_PTPN12 Q05209_S719s _1_1_719_719 Q05209 Q05209|Q05209-3|Q05209-2 Tyrosine-protein phosphatase non-receptor type 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11534.11534.3 11.04 6.84 1.157 3 1 1 0 701.3831 2022.1686 S719s TMT10 712 (K) KSEGLITsENEK (C) KS(0.0)EGLIT(0.0)S(0.99)ENEK K:TMT10,s:Phosphorylated S PTPN12 88960.6 1 14 644.1 254.82 HUMAN 1 -13.3471 14.0844 KSEKRNNSDWLLAKE-p Q9BQG2;S136-p KSEKRNNSDWLLAKE 0.368749698795163 0.153166796080988 -0.123 0.208666666666667 8.03334375689545 10.7155619057977 -0.123 0.208666666666667 0.15727714766355 0.0848093645951787 -1.64094438543793 2.10542851959629 Q9BQG2 NUDT12 Q9BQG2.S136.p_NUDT12 Q9BQG2_S136s _1_1_136_136 Q9BQG2 Q9BQG2|E7EM93 Peroxisomal NADH pyrophosphatase NUDT12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18395.18395.3 13.8 13.8 99 1 1 1 0 585.6509 1674.9692 S136s TMT10 133 (K) RNNsDWLLAK (E) RNNS(1.0)DWLLAK K:TMT10,s:Phosphorylated S NUDT12 52816.6 1 1 6123.1 13.8 HUMAN 1 -8.0333 10.7156 KSELGNQSPSTSSRQ-p Q5JTV8;S315-p KSELGNQSPSTSSRQ 0.703985775191639 0.0143523413869905 -0.0593333333333333 -0.444 2.8655514580119 25.5552023094953 -0.0593333333333333 -0.444 0.516945613132775 0.0027827857389816 -0.692969434584942 -5.17912871808381 Q5JTV8 TOR1AIP1 Q5JTV8.S315.p_TOR1AIP1 Q5JTV8_S315s _1_1_315_315 Q5JTV8 J3KN66|Q5JTV8-3|A0A0A0MSK5 Torsin-1A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5603.5603.3 10.01 10.01 2.856 6 1 1 0 553.5908 1578.7921 S315s TMT10 309 (K) SELGNQsPSTSSR (Q) S(0.0)ELGNQS(0.99)PS(0.0)T(0.0)S(0.0)S(0.0)R s:Phosphorylated S TOR1AIP1 66418.4 2 17 585.1 265.22 HUMAN 1 -2.8656 -25.5552 KSEPAVVSLEYGVAR-p Q9Y217;S611-p KSEPAVVSLEYGVAR 0.772846079388008 0.713052750806684 0.043 0.0363333333333333 2.14080473544689 2.02139424983315 0.043 0.0363333333333334 0.610828829556251 0.627856760646212 0.539763293653804 0.513474902482369 Q9Y217 MTMR6 Q9Y217.S611.p_MTMR6 Q9Y217_S611s _1_1_611_611 Q9Y217 Q9Y217 Myotubularin-related protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20480.20480.2 12.8 10.68 7.165 3 1 1 0 893.4551 1705.9322 S611s TMT10 605 (K) SEPAVVsLEYGVAR (M) S(0.0)EPAVVS(0.99)LEY(0.0)GVAR s:Phosphorylated S MTMR6 72822.4 1 3 3686.1 45.39 HUMAN 1 2.1408 2.0214 KSEPLDESDNDF___-p J3KNW5;S428-p KSEPLDESDNDF___ 0.522932385009279 0.930431025891797 0.0856666666666667 -0.00899999999999997 5.20729650211805 0.441882652056292 0.0856666666666667 -0.00899999999999998 0.301488221456372 0.90325782959158 1.14191415368187 -0.127343869292949 J3KNW5 NotFound J3KNW5.S428.p_NotFound J3KNW5_S428s _1_1_428_428 J3KNW5 J3KNW5|Q96AJ1|Q96AJ1-2 Clusterin-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16088.16088.2 15.49 15.49 15.487 2 1 1 0 967.4449 1853.9169 S428s TMT10 421 (R) KSEPLDEsDNDF (-) KS(0.0)EPLDES(0.99)DNDF K:TMT10,s:Phosphorylated S CLUAP1 50255.7 6 2 3142.1 59.48 HUMAN 1 5.2073 -0.4419 KSERRPPSPDVIVLS-p Q86YP4-3;S100-p KSERRPPSPDVIVLS 0.156190134899628 0.265241185907236 0.231666666666667 -0.150333333333333 16.1858260327211 7.59042784693657 0.231666666666667 -0.150333333333333 0.0240667472342428 0.174163528704664 3.10395260762704 -1.56354979542615 Q86YP4 GATAD2A Q86YP4.3.S100.p_GATAD2A Q86YP4-3_S100s _1_1_100_100 Q86YP4-3 Q86YP4-3 Isoform 3 of Transcriptional repressor p66-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16566.16566.3 19.78 19.78 9.554 4 1 1 0 833.7551 2419.2779 S100s TMT10 97 (R) RPPsPDVIVLSDNEQPSSPR (V) RPPS(0.99)PDVIVLS(0.0)DNEQPS(0.0)S(0.0)PR s:Phosphorylated S GATAD2A 68475 2 4 1046.1 184.48 HUMAN 1 16.1858 -7.5904 KSETSWESPKQIKKK-p Q86UE4;S568-p KSETSWESPKQIKKK 0.259805946096148 0.00566257669290382 0.526666666666667 -0.940666666666667 11.1050797026666 32.5641422328991 0.526666666666667 -0.940666666666667 0.07753397140262 0.0005540969718129 2.17452870541537 -7.23904457360226 Q86UE4 MTDH Q86UE4.S568.p_MTDH Q86UE4_S568s _1_1_568_568 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11700.11700.2 14.41 9.84 2.72 4 1 1 0 794.8871 1508.7997 S568s TMT10 562 (K) SETSWEsPK (Q) S(0.0)ET(0.0)S(0.0)WES(0.99)PK K:TMT10,s:Phosphorylated S MTDH 63892.9 10 26 77.1 644.48 HUMAN 1 11.1051 -32.5641 KSEVIEDSDVETVSE-p Q56NI9;S244-p KSEVIEDSDVETVSE 0.126412404228741 0.719367714785042 0.279666666666667 0.0356666666666667 18.6637170355658 1.97039375061978 0.279666666666667 0.0356666666666667 0.0136027994896607 0.635273332545615 3.59785666416637 0.502177507094812 Q56NI9 ESCO2 Q56NI9.S244.p_ESCO2 Q56NI9_S244s _1_1_244_244 Q56NI9 Q56NI9|E5RFE4 N-acetyltransferase ESCO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15299.15299.4 8.03 8.03 1.234 5 1 1 0 662.8445 2568.3859 S244s TMT10 236 (K) SKSEVIEDsDVETVSEK (K) S(0.0)KS(0.0)EVIEDS(0.99)DVET(0.0)VS(0.0)EK K:TMT10,s:Phosphorylated S ESCO2 69275.7 1 4 3025.1 62.91 HUMAN 1 18.6637 1.9704 KSEWELKTPEKQLLE-p Q9UKL3;T1340-p KSEWELKTPEKQLLE 0.114016248333261 0.00109454193985794 -0.685333333333333 -1.575 19.6595253366456 49.9128205950099 -0.685333333333333 -1.575 0.0108155215337991 1.02027663349522e-05 -3.80625884708976 -15.6331159167391 Q9UKL3 CASP8AP2 Q9UKL3.T1340.p_CASP8AP2 Q9UKL3_T1340t _1_1_1340_1340 Q9UKL3 Q9UKL3|A0A087WTW5 CASP8-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16218.16218.3 10.26 4.79 10.259 2 1 1 0 672.0337 1934.1202 T1340t TMT10 1334 (K) SEWELKtPEK (Q) S(0.0)EWELKT(0.99)PEK K:TMT10,t:Phosphorylated T CASP8AP2 224993 2 8 740.1 234.21 HUMAN 1 -19.6595 -49.9128 KSFDDEESVDGNRPS-p O75122-3;S247-p KSFDDEESVDGNRPS 0.385442025056633 0.008364141432882 -0.121333333333333 -0.451 7.66422285827969 29.5330008945079 -0.121333333333333 -0.451 0.171229155272329 0.00111352484263971 -1.57685217813483 -6.2815336934481 O75122 CLASP2 O75122.3.S247.p_CLASP2 O75122-3_S241sS247s_2_2_241_247 O75122-3 O75122-3|E7EW49|E7ERI8 Isoform 3 of CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18445.18445.5 10.6 10.6 3.201 5 2 2 0 806.4068 3868.0535 S241s S247s TMT10 239 (K) DKsFDDEEsVDGNRPSSAASAFKVPAPK (T) DKS(0.99)FDDEES(0.99)VDGNRPS(0.0)S(0.0)AAS(0.0)AFKVPAPK K:TMT10,s:Phosphorylated S CLASP2 167005.1 1 33 158.2 498.15 HUMAN 1 -7.6642 -29.533 KSFFDNISSELKTSS-p Q9BX40;S323-p KSFFDNISSELKTSS 0.906426058670281 0.0444388044064333 0.018 -0.271 0.837840023082539 18.1035165984224 0.018 -0.271 0.824548104576931 0.015475630083359 0.232692611185418 -3.48037543409285 Q9BX40 LSM14B Q9BX40.S323.p_LSM14B Q9BX40_S323s _1_1_323_323 Q9BX40 Q9BX40|Q9BX40-2 Protein LSM14 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27286.27286.3 8.66 7.91 1.119 3 1 1 0 608.9789 1744.9522 S323s TMT10 317 (K) SFFDNIsSELK (T) S(0.0)FFDNIS(0.99)S(0.0)ELK K:TMT10,s:Phosphorylated S LSM14B 42184.1 3 8 1596.1 128.9 HUMAN 1 0.8378 -18.1035 KSFKRKISVVSATKG-p Q9UKV3;S825-p KSFKRKISVVSATKG 0.365498843349433 0.294917925165553 0.524666666666667 0.383666666666667 8.11690386778226 7.00154437256583 0.524666666666667 0.383666666666667 0.154279993970737 0.199455291600374 1.65543442124997 1.46087984792491 Q9UKV3 ACIN1 Q9UKV3.S825.p_ACIN1 Q9UKV3_S825s _1_1_825_825 Q9UKV3 Q9UKV3|E7EQT4|S4R3H4|Q9UKV3-2|Q9UKV3-3 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11238.11238.3 9.29 9.29 3.673 3 1 1 0 490.9619 1390.9034 S825s Hydrogen 823 (R) KIsVVSATK (G) KIS(0.99)VVS(0.0)AT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S ACIN1 152258.2 2 29 32.2 899.18 HUMAN 1 8.1169 7.0015 KSFKRKISVVSTKGV-p Q9UKV3-5;S825-p KSFKRKISVVSTKGV 0.175358480804402 0.00552846196235592 -0.290333333333333 0.548 15.0509646220503 32.7339281651088 -0.290333333333333 0.548 0.0312538510312782 0.000532852715669246 -2.88801510660277 7.29605046483303 Q9UKV3 ACIN1 Q9UKV3.5.S825.p_ACIN1 Q9UKV3-5_S825s _1_1_825_825 Q9UKV3-5 Q9UKV3-5|G3V3B0 Isoform 4 of Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10036.10036.2 8.71 8.71 8.712 3 1 1 0 700.4198 1319.8663 S825s Hydrogen 823 (R) KIsVVSTK (G) KIS(0.99)VVS(0.0)T(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S ACIN1 150953.7 3 49 32.1 899.18 HUMAN 1 -15.051 32.7339 KSFLDSGYRILGAVA-p P18206;Y822-p KSFLDSGYRILGAVA 0.619088825137392 0.599902338336779 -0.103333333333333 0.0823333333333334 3.86969073307244 3.00766008620214 -0.103333333333333 0.0823333333333334 0.410233315211267 0.500304018705785 -0.892137491168976 0.721866254156768 P18206 VCL P18206.Y822.p_VCL P18206_Y822y _1_1_822_822 P18206 P18206|P18206-2 Vinculin GG20160819_MSz_CCLE_T4D7_pY_Injection_02.15961.16752.2 16.47 16.47 5.328 3 1 1 0 627.2924 1173.6102 Y822y TMT10 816 (K) SFLDSGyR (I) S(0.0)FLDS(0.0)GY(0.99)R y:Phosphorylated Y VCL 124367.7 2 3 16.1 85.81 HUMAN 1 -3.8697 3.0077 KSFNLEASLSKFSYI-p C9JJN9;S32-p KSFNLEASLSKFSYI 0.408673456673804 0.842758914018359 -0.230666666666667 -0.0553333333333333 7.17222351864869 1.04385294594091 -0.230666666666667 -0.0553333333333334 0.191768666422735 0.786347853098567 -1.49112763565045 -0.284814369061417 C9JJN9 NotFound C9JJN9.S32.p_NotFound C9JJN9_S32s _1_1_32_32 C9JJN9 Q8N3P4|C9JJN9|Q8N3P4-3|Q8N3P4-2|C9JP71|F8WB24 Vacuolar protein sorting-associated protein 8 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21706.21706.3 11.21 11.21 3.108 3 1 1 0 545.2929 1553.8939 S32s TMT10 26 (K) SFNLEAsLSK (F) S(0.0)FNLEAS(0.99)LS(0.0)K K:TMT10,s:Phosphorylated S VPS8 163852.7 2 3 2244.1 91.97 HUMAN 1 -7.1722 -1.0439 KSFSRGWSRDQPGQA-p Q6GYQ0-2;S721-p KSFSRGWSRDQPGQA 0.772827856958568 0.159518928836478 0.0673333333333333 0.198333333333333 2.14113579036083 10.4858811979271 0.0673333333333333 0.198333333333333 0.610782268941998 0.0894153086894386 0.539835579056781 2.06538438130595 Q6GYQ0 RALGAPA1 Q6GYQ0.2.S721.p_RALGAPA1 Q6GYQ0-2_S721s _1_1_721_721 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8446.8446.2 11.18 6.6 99 1 1 1 0 897.9139 1714.8645 S721s TMT10 719 (R) GWsRDQPGQAPMR (Q) GWS(1.0)RDQPGQAPMR s:Phosphorylated S RALGAPA1 236609.9 1 8 317.1 366.49 HUMAN 1 2.1411 10.4859 KSFSRRISHLFFHKE-p Q93009;S155-p KSFSRRISHLFFHKE 0.297846960806673 0.0057051108332702 0.162666666666667 0.654666666666667 9.89343750423793 32.4918354998151 0.162666666666667 0.654666666666667 0.102484042897402 0.000563399490648937 1.96320272009356 7.2148812500203 Q93009 USP7 Q93009.S155.p_USP7 Q93009_S155s _1_1_155_155 Q93009 Q93009|Q93009-3 Ubiquitin carboxyl-terminal hydrolase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15687.15687.4 9.4 9.4 99 1 1 1 0 431.4961 1642.9946 S155s TMT10 153 (R) RIsHLFFHK (E) RIS(1.0)HLFFHK K:TMT10,s:Phosphorylated S USP7 129383.8 1 3 1927.1 106.49 HUMAN 1 9.8934 32.4918 KSFSSPPSPSNKREE-p Q5T0Z8;S969-p KSFSSPPSPSNKREE 0.732782574670505 0.774969315446929 0.0466666666666667 0.037 2.55576389711824 1.53094316905221 0.0466666666666667 0.037 0.555166958098614 0.702919648348488 0.628642669811814 0.402181420326783 Q5T0Z8 C6orf132 Q5T0Z8.S969.p_C6orf132 Q5T0Z8_S969s _1_1_969_969 Q5T0Z8 Q5T0Z8 Uncharacterized protein C6orf132 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8938.8938.3 10.27 10.27 1.442 5 1 1 0 610.3176 1748.9696 S969s TMT10 963 (K) SFSSPPsPSNKR (E) S(0.0)FS(0.0)S(0.0)PPS(0.99)PS(0.0)NKR K:TMT10,s:Phosphorylated S C6orf132 124488.2 9 16 336.1 355.09 HUMAN 1 2.5558 1.5309 KSGCTSLTPGPNCDR-p Q9NXR7-1;T48-p KSGCTSLTPGPNCDR 0.805134921082359 0.559030464172909 0.036 0.109 1.81419672898696 3.40436626122551 0.036 0.109 0.658537221715058 0.456628878337034 0.467249753548634 0.801290745878848 Q9NXR7 BRE Q9NXR7.1.T48.p_BRE Q9NXR7-1_T48t _1_1_48_48 Q9NXR7-1 Q9NXR7-1|Q9NXR7-3|Q9NXR7-4 Isoform 1 of BRISC and BRCA1-A complex member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12026.12026.3 16.09 8.06 1.553 4 1 1 0 779.0384 2255.1313 T48t TMT10 42 (K) SGCTSLtPGPNCDRFK (L) S(0.0)GCT(0.0)S(0.0)LT(0.99)PGPNCDRFK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T BABAM2 47601.2 1 2 2860.1 67.94 HUMAN 1 1.8142 3.4044 KSGDGEGTPVEHVRC-p Q7L576-2;T803-p KSGDGEGTPVEHVRC 0.726935837841591 0.0521585060284523 0.0626666666666667 0.295666666666667 2.62590651702099 17.1158751865681 0.0626666666666667 0.295666666666667 0.546272512739306 0.0194273015504036 0.643348690451559 3.28296942720636 Q7L576 CYFIP1 Q7L576.2.T803.p_CYFIP1 Q7L576-2_T803t _1_1_803_803 Q7L576-2 Q7L576|Q7L576-2|Q7L576-3 Isoform 2 of Cytoplasmic FMR1-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4872.4872.3 14.67 14.67 7.322 2 1 1 0 550.2562 1568.7866 T803t TMT10 797 (K) SGDGEGtPVEHVR (C) S(0.0)GDGEGT(0.99)PVEHVR t:Phosphorylated T CYFIP1 95720.1 2 6 2806.1 69.96 HUMAN 1 2.6259 17.1159 KSGFNDNSVKYQQRK-p Q8IZH2;S1279-p KSGFNDNSVKYQQRK 0.118727214055873 0.0134498128763692 0.306333333333333 -0.451 19.2422259558352 26.0171193212567 0.306333333333333 -0.451 0.0119063159901238 0.00250200439291567 3.71817805175313 -5.29911340031221 Q8IZH2 XRN1 Q8IZH2.S1279.p_XRN1 Q8IZH2_S1279s _1_1_1279_1279 Q8IZH2 Q8IZH2|Q8IZH2-2 5'-3' exoribonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9107.9107.3 10.43 7.23 2.49 3 1 1 0 694.345 2001.0554 S1279s TMT10 1273 (K) SGFNDNsVKYQQR (K) S(0.0)GFNDNS(0.99)VKY(0.0)QQR K:TMT10,s:Phosphorylated S XRN1 195644.2 1 3 2073.1 99.19 HUMAN 1 19.2422 -26.0171 KSGFNSKSGQRGSSK-p P07910-2;S164-p KSGFNSKSGQRGSSK 0.331647864397022 0.173739900835041 0.228333333333333 0.201 8.95287460344541 9.99511800844087 0.228333333333333 0.201 0.127266042581068 0.100112475215863 1.8002050950427 1.98006201734765 P07910 HNRNPC P07910.2.S164.p_HNRNPC P07910-2_S164s_1_1_164_164 P07910-2 P07910|G3V2Q1|P07910-2|G3V4C1 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5933.5933.3 11.99 6.63 1.398 3 1 1 0 536.2695 1525.8487 N161n S164s TMT10 158 (K) SGFnSKsGQR (G) S(0.0)GFN(1.0)S(0.0)KS(0.99)GQR K:TMT10,n:Deamidated,s:Phosphorylated S HNRNPC 32394 2 16 261.1 397.39 HUMAN 1 8.9529 9.9951 KSGFSSPSPSQTSSL-p Q12857-2;S335-p KSGFSSPSPSQTSSL 0.599304429327995 0.282698224357306 0.078 0.114666666666667 4.10822935460837 7.23504854117129 0.078 0.114666666666667 0.388308649553519 0.189014510488347 0.937762012024084 1.50166879624749 Q12857 NFIA Q12857.2.S335.p_NFIA Q12857-2_S335s _1_1_335_335 Q12857-2 Q12857-4|B1AKN8|Q12857-3|Q12857-2|B1AKN5|B1AKN6 Isoform 2 of Nuclear factor 1 A-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15813.15813.4 16.02 16.02 1.163 11 1 1 0 859.1771 3353.7188 S335s TMT10 329 (K) SGFSSPsPSQTSSLGTAFTQHHRPVITGPR (A) S(0.0)GFS(0.0)S(0.0)PS(0.99)PS(0.0)QT(0.0)S(0.0)S(0.0)LGT(0.0)AFT(0.0)QHHRPVIT(0.0)GPR s:Phosphorylated S NFIA 55018.3 3 11 555.1 273.2 HUMAN 1 4.1082 7.235 KSGGGLHSVAEGVRL-p Q9NWK9;S17-p KSGGGLHSVAEGVRL 0.590718638628433 0.626434449053383 -0.113 -0.0493333333333333 4.21381199854128 2.7626648333442 -0.113 -0.0493333333333333 0.378982189179976 0.529338541799633 -0.957785619861595 -0.671690274362779 Q9NWK9 ZNHIT6 Q9NWK9.S17.p_ZNHIT6 Q9NWK9_S17s _1_1_17_17 Q9NWK9 Q9NWK9|Q9NWK9-2 Box C/D snoRNA protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11843.11843.4 14.28 14.28 1.107 3 1 1 0 568.5421 2191.1781 S17s TMT10 11 (K) SGGGLHsVAEGVRLSPEPGR (E) S(0.0)GGGLHS(0.99)VAEGVRLS(0.0)PEPGR s:Phosphorylated S ZNHIT6 54545 2 1 2877.1 67.51 HUMAN 1 -4.2138 -2.7627 KSGGIVISPFRLEEL-p Q16204;S52-p KSGGIVISPFRLEEL 0.844490429219358 0.104828823135371 0.0286666666666667 -0.206 1.41934650970296 12.9423145579002 0.0286666666666667 -0.206 0.721215993616327 0.050788869284106 0.375993800513749 -2.49931348750507 Q16204 CCDC6 Q16204.S52.p_CCDC6 Q16204_S52s _1_1_52_52 Q16204 Q16204 Coiled-coil domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27408.27408.4 16.48 16.48 6.836 3 1 1 0 550.045 2117.1916 S52s TMT10 46 (K) SGGIVIsPFRLEELTNR (L) S(0.0)GGIVIS(0.99)PFRLEELT(0.0)NR s:Phosphorylated S CCDC6 53461.2 4 2 423.1 319.68 HUMAN 1 1.4193 -12.9423 KSGGRLGSPKPERQR-p E7ERS3;S892-p KSGGRLGSPKPERQR 0.362002918323239 0.554393194337063 0.179666666666667 0.0746666666666667 8.19748918683939 3.45149482953555 0.179666666666667 0.0746666666666667 0.151443654582279 0.451700443577803 1.66940340198101 0.810590476958104 E7ERS3 ZC3H18 E7ERS3.S892.p_ZC3H18 E7ERS3_S892s _1_1_892_892 E7ERS3 E7ERS3|Q86VM9 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4139.4139.3 10.73 10.73 99 1 1 1 0 398.2146 1112.6625 S892s Hydrogen 890 (R) LGsPKPER (Q) LGS(1.0)PKPER K:TMT10-Lys-Only,s:Phosphorylated S ZC3H18 109165.8 16 19 157.1 499.97 HUMAN 1 8.1975 3.4515 KSGKTTLSASGTGFG-p P49790-3;S740-p KSGKTTLSASGTGFG 0.572577112843414 0.363094882949464 -0.075 -0.109666666666667 4.46021321745909 5.83297512870968 -0.075 -0.109666666666667 0.358078856741527 0.261037250944775 -1.00413937532715 -1.2544610697557 P49790 NUP153 P49790.3.S740.p_NUP153 P49790-3_S740s _1_1_740_740 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16245.16245.2 12.48 9.74 2.207 5 1 1 0 890.4515 1699.9267 S740s TMT10 737 (K) TTLsASGTGFGDK (F) T(0.0)T(0.0)LS(0.99)AS(0.0)GT(0.0)GFGDK K:TMT10,s:Phosphorylated S NUP153 158989.2 2 32 64.1 696.53 HUMAN 1 -4.4602 -5.833 KSGNFGGSRNMGGPY-p P22626;S324-p KSGNFGGSRNMGGPY 0.736602239813219 0.995186789721184 -0.0983333333333334 -0.00133333333333332 2.51628207237505 0.0290080478224171 -0.0983333333333334 -0.00133333333333329 0.560237006462467 0.99334290742565 -0.620326763448824 -0.00873506425526187 P22626 HNRNPA2B1 P22626.S324.p_HNRNPA2B1 P22626_S324s _1_1_324_324 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12191.12191.3 16.23 8.62 2.189 7 1 1 0 1087.7961 3181.4092 S324s TMT10 318 (K) SGNFGGsRNMGGPYGGGNYGPGGSGGSGGYGGR (S) S(0.0)GNFGGS(0.99)RNMGGPY(0.0)GGGNY(0.0)GPGGS(0.0)GGS(0.0)GGY(0.0)GGR s:Phosphorylated S HNRNPA2B1 37486.1 5 16 299.1 378.08 HUMAN 1 -2.5163 -0.029 KSGPSPLSSPNGKLT-p O75179;S1699-p KSGPSPLSSPNGKLT 0.936107507392066 0.00227084207720462 -0.0133333333333333 -0.756666666666667 0.558749055342801 40.8734437171074 -0.0133333333333333 -0.756666666666667 0.879275747518355 8.17816047677985e-05 -0.159211915133288 -10.5312892140325 O75179 ANKRD17 O75179.S1699.p_ANKRD17 O75179_S1699sS1700s_2_2_1699_1700 O75179 O75179|O75179-2|O75179-7|O75179-6|O75179-4 Ankyrin repeat domain-containing protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19828.19828.3 8.01 8.01 1.281 6 2 2 0 891.4703 2511.475 S1699s S1700s N1702n TMT10 1693 (K) SGPSPLssPnGKLTVASPK (R) S(0.0)GPS(0.0)PLS(0.99)S(0.99)PN(1.0)GKLT(0.0)VAS(0.0)PK K:TMT10,s:Phosphorylated S,n:Deamidated ANKRD17 276135.9 14 16 287.2 383.69 HUMAN 1 -0.5587 -40.8734 KSGRRRRSPSPPPTR-p A9Z1X7;S558-p KSGRRRRSPSPPPTR 0.87463617951721 0.328263923151577 -0.0423333333333333 0.233 1.13838920055788 6.40627390002466 -0.0423333333333333 0.233 0.76941576389101 0.228756061141669 -0.308240515218296 1.35628616008078 A9Z1X7 NotFound A9Z1X7.S558.p_NotFound A9Z1X7_S558s _1_1_558_558 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.0931.1321.3 7.82 7.82 7.817 3 1 1 0 410.8751 1150.644 S558s Hydrogen 556 (R) RRsPSPPPTR (R) RRS(0.99)PS(0.0)PPPT(0.0)R s:Phosphorylated S SRRM1 103445.7 2 21 8.1 1346.57 HUMAN 1 -1.1384 6.4063 KSGSEAGSPRRPRRQ-p Q6PD62;S1072-p KSGSEAGSPRRPRRQ 0.110066071061823 0.0234393081433852 -0.518 0.914 20.056891767286 22.2340128757182 -0.518 0.914 0.00986985615588497 0.00597858918851421 -3.89117060305953 4.37096252272264 Q6PD62 CTR9 Q6PD62.S1072.p_CTR9 Q6PD62_S1072s _1_1_1072_1072 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3721.3721.2 11.08 6.37 4.958 3 1 1 0 578.7639 1076.5534 S1072s TMT10 1066 (K) SGSEAGsPR (R) S(0.0)GS(0.0)EAGS(0.99)PR s:Phosphorylated S CTR9 134412.8 1 8 152.1 508.81 HUMAN 1 -20.0569 22.234 KSGSNDDSDIDIQED-p J3KNW5;S314-p KSGSNDDSDIDIQED 0.25414491835742 0.680564203014971 0.310666666666667 -0.188333333333333 11.3335445498377 2.28489837445025 0.310666666666667 -0.188333333333333 0.0735606477811871 0.59089479243836 2.21465002780049 -0.570939734422039 J3KNW5 NotFound J3KNW5.S314.p_NotFound J3KNW5_S314sS324s_2_2_314_324 J3KNW5 J3KNW5|Q96AJ1|I3L3S9|Q96AJ1-2 Clusterin-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.13661.13862.3 18.63 18.63 2.608 5 2 2 0 1030.0565 2928.2188 S314s S324s TMT10 308 (K) SGSNDDsDIDIQEDDEsDSELEER (R) S(0.0)GS(0.0)NDDS(0.99)DIDIQEDDES(0.99)DS(0.0)ELEER s:Phosphorylated S CLUAP1 50255.7 1 3 3142.1 59.48 HUMAN 1 11.3335 -2.2849 KSGTPYRTPKSVRRG-p Q96GX5;T722-p KSGTPYRTPKSVRRG 0.651239208716635 0.00295034438929059 -0.0646666666666667 -0.889333333333333 3.49013044181994 38.1550670380305 -0.0646666666666667 -0.889333333333333 0.447699857157437 0.000152930213981105 -0.81832026147269 -9.33171620055578 Q96GX5 MASTL Q96GX5.T722.p_MASTL Q96GX5_T722t _1_1_722_722 Q96GX5 Q96GX5|Q96GX5-3|Q96GX5-2 Serine/threonine-protein kinase greatwall HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5708.5708.3 7.7 7.7 7.696 4 1 1 0 515.6129 1464.8575 T722t TMT10 716 (K) SGTPYRtPK (S) S(0.0)GT(0.0)PY(0.0)RT(0.99)PK K:TMT10,t:Phosphorylated T MASTL 98458.4 1 7 659.1 251.91 HUMAN 1 -3.4901 -38.1551 KSGVFNVSELVRVSR-p Q5VW30;S221-p KSGVFNVSELVRVSR 0.57686855543634 0.874227449773814 -0.0773333333333333 0.025 4.39561921142167 0.821680391020401 -0.0773333333333334 0.025 0.363444481410452 0.827621874712003 -0.992036655771284 0.228508611105597 Q5VW30 NFIB Q5VW30.S221.p_NFIB Q5VW30_S221s _1_1_221_221 Q5VW30 Q5VW26|Q5VW30|O00712-5 Nuclear factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27089.27089.2 9.9 9.9 9.895 2 1 1 0 758.3938 1435.8106 S221s TMT10 215 (K) SGVFNVsELVR (V) S(0.0)GVFNVS(0.99)ELVR s:Phosphorylated S NFIB 63015.1 1 4 655.1 253.73 HUMAN 1 -4.3956 0.8217 KSGWSSQSDYYASYY-p J3KNL6;S1253-p KSGWSSQSDYYASYY 0.435992545043959 0.435386000199679 0.122333333333333 0.0783333333333334 6.63870267441851 4.81169871251269 0.122333333333333 0.0783333333333334 0.216835173866736 0.330240344568619 1.39760967916792 1.06922594382823 J3KNL6 SEC16A J3KNL6.S1253.p_SEC16A J3KNL6_S1253s _1_1_1253_1253 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21980.21980.3 24.04 18.93 2.118 13 1 1 0 1212.8235 3556.4828 S1253s TMT10 1247 (K) SGWSSQsDYYASYYSSQYDYGDPGHWDR (Y) S(0.0)GWS(0.0)S(0.0)QS(0.99)DY(0.0)Y(0.0)AS(0.0)Y(0.0)Y(0.0)S(0.0)S(0.0)QY(0.0)DY(0.0)GDPGHWDR s:Phosphorylated S SEC16A 253486.5 1 25 15.1 1143.82 HUMAN 1 6.6387 4.8117 KSGYHDDSDEDLLE_-p Q99523;S825-p KSGYHDDSDEDLLE_ 0.396926015285751 0.188115797671727 0.128666666666667 0.150333333333333 7.40569238038634 9.54422378738731 0.128666666666667 0.150333333333333 0.181731730450612 0.111065102376302 1.53185714122923 1.9018933703376 Q99523 SORT1 Q99523.S825.p_SORT1 Q99523_S825s _1_1_825_825 Q99523 Q99523|Q99523-2 Sortilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14093.14299.3 16.95 16.95 7.794 3 1 1 0 601.9104 1723.7496 S825s TMT10 819 (K) SGYHDDsDEDLLE (-) S(0.0)GY(0.0)HDDS(0.99)DEDLLE s:Phosphorylated S SORT1 93035.9 9 4 2296.1 89.31 HUMAN 1 7.4057 9.5442 KSHIAQWSPHTPPRH-p P40189;S667-p KSHIAQWSPHTPPRH 0.248443979884971 0.178708313181345 0.339666666666667 -0.143666666666667 11.5529363669151 9.83767747871413 0.339666666666667 -0.143666666666667 0.0699368976332319 0.103808341395198 2.2532795569932 -1.95274753670658 P40189 IL6ST P40189.S667.p_IL6ST P40189_S667s _1_1_667_667 P40189 P40189|P40189-3 Interleukin-6 receptor subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8856.8856.4 14.75 14.75 3.957 3 1 1 0 456.4791 1742.9288 S667s TMT10 661 (K) SHIAQWsPHTPPR (H) S(0.0)HIAQWS(0.99)PHT(0.0)PPR s:Phosphorylated S IL6ST 104561.7 4 1 2726.1 72.62 HUMAN 1 11.5529 -9.8377 KSHPLDLSPNVQSRD-p Q9ULH1-2;S1030-p KSHPLDLSPNVQSRD 0.796313559448739 0.143662943094981 -0.0383333333333334 -0.156 1.91030849233843 11.1006961611803 -0.0383333333333334 -0.156 0.644123509873872 0.0776122696489348 -0.488846305649795 -2.17276996935234 Q9ULH1 ASAP1 Q9ULH1.2.S1030.p_ASAP1 Q9ULH1-2_S1030s _1_1_1030_1030 Q9ULH1-2 Q9ULH1-2|A0A0A0MRE5 Isoform 1 of Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11201.11201.3 11.98 11.98 2.7 3 1 1 0 586.9626 1678.9074 S1030s TMT10 1024 (K) SHPLDLsPNVQSR (D) S(0.0)HPLDLS(0.99)PNVQS(0.0)R s:Phosphorylated S ASAP1 126865.1 2 9 801.1 222.95 HUMAN 1 -1.9103 -11.1007 KSHQRIHTGERPYKC-p M0QY62;T349-p KSHQRIHTGERPYKC 0.295243174589512 0.00580592124960547 -0.169 -1.30066666666667 9.97782410356022 32.322448302869 -0.169 -1.30066666666667 0.100511924765636 0.000585807826600938 -1.97785799146413 -7.15854013648072 M0QY62 NotFound M0QY62.T349.p_NotFound M0QY62_T349t _1_1_349_349 M0QY62 Q8NB50|Q8NB50-3|Q9P2J8|Q86UE3|M0QY24|Q99676|Q9P2J8-2|E7EQD3|Q8NB50-2|Q8N8Z8-2|Q16587|Q86T29|M0QY62|M0QZ59|Q16587-3|O14978|Q86T29-2|Q9HCX3|O43309|A0A0A0MTT2|Q15776|Q16587-2|Q16587-4|Q68DY1|Q49AA0|Q96JC4|Q96HQ0-5|Q8TBZ5|A0A087X1I5|Q9BR84|Q9Y2P0|Q8WV37|Q68DY9|Q6NX45|Q96HQ0-2|Q96HQ0-6|Q8N9Z0|Q8WV37-2|Q68DY1-2|Q6ZS27-3|Q68DY9-3|A6NNZ3|Q96NJ6|Q96HQ0-4|Q96HQ0-3|A6NP11|F8WEZ9|Q8N9Z0-2|A0A087WTB1|A0A087WWK0|A0A087WTN2|P0CB33|E7ETH6|A0A1W2PQL4|Q68DY9-2|Q8WV37-3|B4DI05|Q6ZS27-2|Q5EBM4|Q5EBM4-2|Q9H4Q4 Zinc finger protein 587B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6559.6559.4 11.58 11.58 7.962 2 1 1 0 410.4739 1558.9106 T349t TMT10 347 (R) IHtGERPYK (C) IHT(0.99)GERPY(0.0)K K:TMT10,t:Phosphorylated T ZNF587B 74597.7 2 2 3243.3 56.13 HUMAN 1 -9.9778 -32.3224 KSHRRKRSRSIEDDE-p Q9HAZ1;S136-p KSHRRKRSRSIEDDE 0.474370870262442 0.0154494473436868 0.135666666666667 0.531666666666667 5.96580667330787 25.0509712784761 0.135666666666667 0.531666666666667 0.25317413373777 0.00312538031285786 1.27846991501361 5.05037756294999 Q9HAZ1 CLK4 Q9HAZ1.S136.p_CLK4 Q9HAZ1_S136sS138s_2_2_136_138 Q9HAZ1 Q9HAZ1|B7ZL31|A0A087WX74 Dual specificity protein kinase CLK4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17050.17050.4 14.8 14.8 8.28 3 2 2 0 701.8094 2644.2834 S136s S138s TMT10 136 (R) sRsIEDDEEGHLICQSGDVLR (A) S(0.99)RS(0.99)IEDDEEGHLICQS(0.0)GDVLR C:Carbamidomethylation,s:Phosphorylated S CLK4 58346.7 4 2 3549.1 48.46 HUMAN 1 5.9658 25.051 KSHRRKRTRSVEDDE-p P49759-3;T180-p KSHRRKRTRSVEDDE 0.248650960362662 0.0790882987832723 0.179666666666667 0.306666666666667 11.5431656234554 14.624279738458 0.179666666666667 0.306666666666667 0.070094418572003 0.0344803786280561 2.25155694873875 2.80650168593022 P49759 CLK1 P49759.3.T180.p_CLK1 P49759-3_T180tS182s_2_2_180_182 P49759-3 P49759-3|F8WBF5 Isoform 3 of Dual specificity protein kinase CLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12714.12714.5 14.01 14.01 14.014 4 2 2 0 695.9342 3315.7116 T180t S182s TMT10 178 (R) KRtRsVEDDEEGHLICQSGDVLSAR (Y) KRT(0.99)RS(0.99)VEDDEEGHLICQS(0.0)GDVLS(0.0)AR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S CLK1 62554.3 7 3 3131.1 59.93 HUMAN 1 11.5432 14.6243 KSHSRQASTDAGTAG-p P46937-9;S109-p KSHSRQASTDAGTAG 0.300580095759383 0.926095799119095 0.167 -0.00999999999999999 9.80831265542926 0.470968072431378 0.167 -0.00999999999999999 0.104512619847096 0.897228773710622 1.94842625516581 -0.135335864804595 P46937 YAP1 P46937.9.S109.p_YAP1 P46937-9_S109s _1_1_109_109 P46937-9 P46937-9|P46937-8|P46937-2|P46937-7|P46937-6|P46937-3|P46937-5 Isoform 9 of Transcriptional coactivator YAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8411.8411.2 18.22 13.21 1.14 4 1 1 0 1045.5171 2010.0566 S109s TMT10 107 (R) QAsTDAGTAGALTPQHVR (A) QAS(0.99)T(0.0)DAGT(0.0)AGALT(0.0)PQHVR s:Phosphorylated S YAP1 54998.2 11 5 436.1 313.01 HUMAN 1 9.8083 -0.471 KSHSRTNSGISSASG-p Q86X10;S720-p KSHSRTNSGISSASG 0.601113862580168 0.498211407969772 0.0696666666666667 -0.186 4.08361183974639 4.04934304482439 0.0696666666666667 -0.186 0.390515985415389 0.393609612089482 0.933078704780349 -0.926391556891883 Q86X10 RALGAPB Q86X10.S720.p_RALGAPB Q86X10_S720s _1_1_720_720 Q86X10 Q86X10|Q86X10-3|Q86X10-2|Q86X10-4 Ral GTPase-activating protein subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14773.14773.3 14.43 10.63 13.982 10 1 1 0 1066.1833 3116.5657 S720s TMT10 718 (R) TNsGISSASGGSTEPTTPDSERPAQALLR (D) T(0.0)NS(0.99)GIS(0.0)S(0.0)AS(0.0)GGS(0.0)T(0.0)EPT(0.0)T(0.0)PDS(0.0)ERPAQALLR s:Phosphorylated S RALGAPB 168564.2 1 8 1153.1 171.93 HUMAN 1 4.0836 -4.0493 KSIKENASAGVERLL-p P51153;S111-p KSIKENASAGVERLL 0.167787448802573 0.021045775789504 1.11933333333333 -0.797666666666667 15.4834474660796 22.9345962412366 1.11933333333333 -0.797666666666667 0.028291453048875 0.00508792119285031 2.9696235148744 -4.53392373602046 P51153 RAB13 P51153.S111.p_RAB13 P51153_S111s _1_1_111_111 P51153 P51153|A0A087WWB9 Ras-related protein Rab-13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7448.7448.3 10.82 6.5 4.842 2 1 1 0 600.3216 1718.9801 S111s TMT10 105 (K) SIKENAsAGVER (L) S(0.0)IKENAS(0.99)AGVER K:TMT10,s:Phosphorylated S RAB13 23001.9 1 2 2008.3 102.72 HUMAN 1 15.4834 -22.9346 KSIKPSDSPRSICSD-p Q92610;S348-p KSIKPSDSPRSICSD 0.668315561863661 0.482713130425757 -0.0593333333333333 -0.108333333333333 3.27359412342735 4.22173201690489 -0.0593333333333333 -0.108333333333333 0.470587717395442 0.378291687504575 -0.775455032947361 -0.959114480950196 Q92610 ZNF592 Q92610.S348.p_ZNF592 Q92610_S348s _1_1_348_348 Q92610 Q92610|H0YM74 Zinc finger protein 592 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7326.7582.3 13.03 6.05 1.973 3 1 1 0 508.9451 1444.8524 S348s TMT10 342 (K) SIKPSDsPR (S) S(0.0)IKPS(0.0)DS(0.99)PR K:TMT10,s:Phosphorylated S ZNF592 140207.3 5 7 164.1 494.76 HUMAN 1 -3.2736 -4.2217 KSIQKQNSLGSNEEK-p O75554;S277-p KSIQKQNSLGSNEEK 0.420320976430283 0.12199016840853 0.110666666666667 0.221333333333333 6.94573455319496 12.0503570574433 0.110666666666667 0.221333333333333 0.202034968695732 0.0623683556909898 1.45151095082052 2.34009632167864 O75554 WBP4 O75554.S277.p_WBP4 O75554_S277s _1_1_277_277 O75554 O75554|O75554-2 WW domain-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7392.7392.2 12.01 12.01 3.337 2 1 1 0 822.4085 1563.8379 S277s TMT10 275 (K) QNsLGSNEEK (S) QNS(0.99)LGS(0.0)NEEK K:TMT10,s:Phosphorylated S WBP4 42677.2 2 2 2955.1 64.79 HUMAN 1 6.9457 12.0504 KSIRPPQSPPQNCSR-p Q96S21;S268-p KSIRPPQSPPQNCSR 0.140818172070489 0.695517324710274 0.312333333333333 -0.0403333333333333 17.4028941854145 2.16684366864181 0.312333333333333 -0.0403333333333333 0.0181848859424803 0.607177448934513 3.34241441028562 -0.545376434098295 Q96S21 RAB40C Q96S21.S268.p_RAB40C Q96S21_S268s _1_1_268_268 Q96S21 Q96S21|Q96S21-2 Ras-related protein Rab-40C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6912.7115.3 11.37 4.32 2.52 3 1 1 0 644.982 1852.9649 S268s TMT10 262 (K) SIRPPQsPPQNCSR (S) S(0.0)IRPPQS(0.99)PPQNCS(0.0)R C:Carbamidomethylation,s:Phosphorylated S RAB40C 31759.9 2 3 4470.1 30.95 HUMAN 1 17.4029 -2.1668 KSISREPSPALGPNL-p Q9BRZ2;S475-p KSISREPSPALGPNL 0.840000807577538 0.769835038061806 -0.0336666666666667 0.03 1.46288117241394 1.56958640150951 -0.0336666666666667 0.03 0.714022476074408 0.696692860197763 -0.386270109270329 0.411179333866582 Q9BRZ2 TRIM56 Q9BRZ2.S475.p_TRIM56 Q9BRZ2_S475s _1_1_475_475 Q9BRZ2 Q9BRZ2 E3 ubiquitin-protein ligase TRIM56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29011.29011.4 21.63 16.39 3.577 7 1 1 0 953.488 3730.9577 S475s TMT10 469 (K) SISREPsPALGPNLDGSGLLPRPIFYCSFPTR (M) S(0.0)IS(0.0)REPS(0.99)PALGPNLDGS(0.0)GLLPRPIFY(0.0)CS(0.0)FPT(0.0)R C:Carbamidomethylation,s:Phosphorylated S TRIM56 83197.9 7 5 1098.1 178.07 HUMAN 1 -1.4629 1.5696 KSKARSQSVSPSKQA-p Q12872-2;S920-p KSKARSQSVSPSKQA 0.113413178970906 0.0417217648713714 0.326666666666667 0.451 19.7201795229191 18.4894906081591 0.326666666666667 0.451 0.0106655203259923 0.0141595985070554 3.81915356754622 3.55900103780302 Q12872 SFSWAP Q12872.2.S920.p_SFSWAP Q12872-2_S918sS920sS922s_3_3_918_922 Q12872-2 Q12872-2 Isoform 2 of Splicing factor, suppressor of white-apricot homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5809.5809.2 7.01 7.01 7.01 4 3 3 0 644.7455 1048.5836 S918s S920s S922s Hydrogen 918 (R) sQsVsPSK (Q) S(0.99)QS(0.99)VS(0.99)PS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S SFSWAP 110466.6 1 16 485.1 296.41 HUMAN 1 19.7202 18.4895 KSKASQGSDLEQNEA-p Q96T21;S370-p KSKASQGSDLEQNEA 0.151152930876387 0.00448198400218091 0.807666666666667 -0.694333333333333 16.5372168433812 34.4761588575968 0.807666666666667 -0.694333333333333 0.0221961839656613 0.000356766538131631 3.17203327926398 -7.90334698507142 Q96T21 SECISBP2 Q96T21.S370.p_SECISBP2 Q96T21_S370s _1_1_370_370 Q96T21 Q96T21-3|Q96T21-2 Selenocysteine insertion sequence-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5968.5968.4 12.12 12.12 1.389 4 1 1 0 651.3399 2522.3778 S370s TMT10 364 (K) SKASQGsDLEQNEASRK (N) S(0.0)KAS(0.0)QGS(0.99)DLEQNEAS(0.0)RK K:TMT10,s:Phosphorylated S SECISBP2 96144.8 2 2 5250.1 21.34 HUMAN 1 16.5372 -34.4762 KSKDKAATPRKDGPK-p S5FZ81;T352-p KSKDKAATPRKDGPK 0.229401753870038 0.000952253650599092 0.178333333333333 -1.736 12.2852231704327 54.6239994078629 0.178333333333333 -1.736 0.0590850602819045 3.44826043567789e-06 2.38302978473393 -19.1558689338283 S5FZ81 NotFound S5FZ81.T352.p_NotFound S5FZ81_T352t _1_1_352_352 S5FZ81 Q8WUB8|Q8WUB8-2|Q8WUB8-3|S5FZ81 PHD finger protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.4739.4739.3 11.01 6.92 99 1 1 1 0 603.3513 1728.0735 T352t TMT10 350 (K) AAtPRKDGPK (R) AAT(1.0)PRKDGPK K:TMT10,t:Phosphorylated T PHF10 42782.4 5 7 1372.1 149.1 HUMAN 1 12.2852 -54.624 KSKDRKKSPIINESR-p Q13523;S277-p KSKDRKKSPIINESR 0.973184341125227 0.261188021425316 -0.00733333333333334 0.143333333333333 0.229969709854998 7.68297918885233 -0.00733333333333334 0.143333333333333 0.948425078128889 0.1704912445818 -0.0677401930427393 1.57963286023866 Q13523 PRPF4B Q13523.S277.p_PRPF4B Q13523_S277s_1_1_277_277 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6044.6044.3 11.32 11.32 1.79 2 1 1 0 570.9899 1630.0052 S277s N281n Hydrogen 275 (R) KKsPIInESR (S) KKS(0.99)PIIN(1.0)ES(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated PRPF4B 117327.1 38 11 70.1 666.55 HUMAN 1 -0.23 7.683 KSKISRKSVQPTSEE-p Q9UHD8;S327-p KSKISRKSVQPTSEE 0.0428370985731628 0.0057193778340584 -0.705666666666667 -0.634 30.4814825532981 32.4702959355746 -0.705666666666667 -0.634 0.000895059166585012 0.000566200705853989 -6.57996381358984 -7.2076962840799 Q9UHD8 SEPT9 Q9UHD8.S327.p_SEPT9 Q9UHD8_S327s _1_1_327_327 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2|Q9UHD8-7|Q9UHD8-8|Q9UHD8-3|Q9UHD8-9|Q9UHD8-4 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10305.10305.3 15.4 15.4 5.67 3 1 1 0 637.012 1829.0533 S327s TMT10 327 (K) sVQPTSEERIPK (T) S(0.99)VQPT(0.0)S(0.0)EERIPK K:TMT10,s:Phosphorylated S SEPT9 65685.6 8 21 110.1 572.91 HUMAN 1 -30.4815 -32.4703 KSKKSASSESEAENL-p Q13427;S257-p KSKKSASSESEAENL 0.672208072197654 0.478170412362545 -0.077 0.069 3.23041692541028 4.2740383239074 -0.077 0.069 0.475289595655066 0.373762880067696 -0.766836323798441 0.968990574053608 Q13427 PPIG Q13427.S257.p_PPIG Q13427_S256sS257sS259s_3_3_256_259 Q13427 Q13427|E9PG73|Q13427-2 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22529.22529.3 18.09 18.09 2.468 6 3 3 0 1287.5695 3620.7877 S256s S257s S259s TMT10 254 (K) SAssEsEAENLEAQPQSTVRPEEIPPIPENR (F) S(0.0)AS(0.99)S(0.99)ES(0.99)EAENLEAQPQS(0.0)T(0.0)VRPEEIPPIPENR s:Phosphorylated S PPIG 89129.1 4 26 112.1 571.91 HUMAN 1 -3.2304 4.274 KSKLDWESFKEEEGI-p Q9UEE9;S250-p KSKLDWESFKEEEGI 0.568526164873194 0.960726206199294 0.0756666666666667 -0.00633333333333332 4.51194964960499 0.250768635972496 0.0756666666666667 -0.00633333333333333 0.353838459054942 0.943893806481873 1.01380898119617 -0.0736972133339169 Q9UEE9 CFDP1 Q9UEE9.S250.p_CFDP1 Q9UEE9_S250s _1_1_250_250 Q9UEE9 Q9UEE9 Craniofacial development protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26533.26533.4 24.49 23.5 99 1 1 1 0 760.6277 2959.5202 S250s TMT10 246 (K) LDWEsFKEEEGIGEELAIHNR (G) LDWES(1.0)FKEEEGIGEELAIHNR K:TMT10,s:Phosphorylated S CFDP1 33592.3 2 4 2807.1 69.95 HUMAN 1 4.5119 -0.2508 KSKPLAASPKPAGLK-p P46821;S2271-p KSKPLAASPKPAGLK 0.657302725891418 0.0413904939374065 0.0656666666666667 -0.434333333333333 3.41977841386455 18.5427905904822 0.0656666666666667 -0.434333333333333 0.455011275185507 0.0139868829652395 0.804457255718037 -3.56992648174473 P46821 MAP1B P46821.S2271.p_MAP1B P46821_S2271s _1_1_2271_2271 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13631.13631.4 13 13 6.498 2 1 1 0 591.116 2281.4777 S2271s TMT10 2265 (K) SKPLAAsPKPAGLK (E) S(0.0)KPLAAS(0.99)PKPAGLK K:TMT10,s:Phosphorylated S MAP1B 271827.6 2 25 210.1 442.48 HUMAN 1 3.4198 -18.5428 KSKPNLPSESRSRSK-p Q08170;S456-p KSKPNLPSESRSRSK 0.576606946001402 0.131811655279202 0.127333333333333 0.161 4.39985013508491 11.6027348901656 0.127333333333333 0.161 0.363090583964681 0.0691395440151092 0.992830423143844 2.26097800612509 Q08170 SRSF4 Q08170.S456.p_SRSF4 Q08170_S456s _1_1_456_456 Q08170 Q08170 Serine/arginine-rich splicing factor 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7968.7968.3 11.16 11.16 2.928 3 1 1 0 551.6308 1572.911 S456s TMT10 450 (K) SKPNLPsESR (S) S(0.0)KPNLPS(0.99)ES(0.0)R K:TMT10,s:Phosphorylated S SRSF4 56791.5 2 2 743.2 233.79 HUMAN 1 4.3999 11.6027 KSKPWSRSIEDLHRG-p Q96PY5-3;S171-p KSKPWSRSIEDLHRG 0.9421991389452 0.814301701828603 -0.022 -0.0676666666666667 0.509229766749253 1.24870828664614 -0.0219999999999999 -0.0676666666666667 0.889358834115804 0.750117282033215 -0.145797165001463 -0.335116951374308 Q96PY5 FMNL2 Q96PY5.3.S171.p_FMNL2 Q96PY5-3_S171s _1_1_171_171 Q96PY5-3 Q96PY5-3 Isoform 2 of Formin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8282.8282.2 12.93 12.93 99 1 1 1 0 589.7928 1098.6105 S171s TMT10 171 (R) sIEDLHR (G) S(1.0)IEDLHR s:Phosphorylated S FMNL2 124503.7 4 1 4587.1 29.2 HUMAN 1 -0.5092 -1.2487 KSKQGLDSFDTGKGA-p Q14241;S373-p KSKQGLDSFDTGKGA 0.422648449149654 0.0713780522378276 -0.271333333333333 0.451 6.89165375242199 15.2418422370145 -0.271333333333333 0.451 0.204566551826012 0.0299099561480428 -1.44203412880635 2.92198860973115 Q14241 TCEB3 Q14241.S373.p_TCEB3 Q14241_S373s _1_1_373_373 Q14241 Q14241|A0A024RAC6 Elongin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13305.13305.3 12.01 12.01 2.422 3 1 1 0 684.0332 1970.1162 S373s TMT10 367 (K) SKQGLDsFDTGK (G) S(0.0)KQGLDS(0.99)FDT(0.0)GK K:TMT10,s:Phosphorylated S ELOA 90363.7 1 4 2069.1 99.52 HUMAN 1 -6.8917 15.2418 KSKQHDYSDYEDSSL-p A8MW92;S584-p KSKQHDYSDYEDSSL 0.253208428728634 0.234018221668803 -0.227 0.126 11.3708016211145 8.30557702652106 -0.227 0.124079459796541 0.0729322879352366 0.14772101986235 -2.22120286560271 1.68757624391178 A8MW92 PHF20L1 A8MW92.S584.p_PHF20L1 A8MW92_S584s _1_1_584_584 A8MW92 A8MW92|F8W9L8|A0A0A0MQS0 PHD finger protein 20-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21962.21962.3 21.29 21.29 3.022 5 1 1 0 814.6835 2362.0673 S584s TMT10 580 (K) QHDYsDYEDSSLEFLER (C) QHDY(0.0)S(0.99)DY(0.0)EDS(0.0)S(0.0)LEFLER s:Phosphorylated S PHF20L1 116320.5 1 7 1882.1 109.28 HUMAN 1 -11.3708 8.3056 KSKSKSPSPLKNKLS-p O94913;S372-p KSKSKSPSPLKNKLS 0.801789763948685 0.223033871305293 0.038 -0.133333333333333 1.84686837072205 8.58305066983572 0.038 -0.133333333333333 0.653601684670331 0.138578205442924 0.47461639780861 -1.73559333148675 O94913 PCF11 O94913.S372.p_PCF11 O94913_S372s _1_1_372_372 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9054.9054.3 7.16 2.68 1.577 3 1 1 0 537.6547 1530.9822 S372s TMT10 368 (K) SKSPsPLK (N) S(0.0)KS(0.0)PS(0.99)PLK K:TMT10,s:Phosphorylated S PCF11 173731.7 2 4 508.1 288.88 HUMAN 1 1.8469 -8.5831 KSKTTKDSPQAARDG-p Q7Z591;S1193-p KSKTTKDSPQAARDG 0.535600087803484 0.0137719194356848 0.200333333333333 0.366333333333333 5.02019085506165 25.8461824388392 0.200333333333333 0.366333333333333 0.314760998618715 0.0026024461757234 1.10775691195567 5.25448149931169 Q7Z591 AKNA Q7Z591.S1193.p_AKNA Q7Z591_S1193s _1_1_1193_1193 Q7Z591 Q7Z591|Q7Z591-2 AT-hook-containing transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3894.3894.3 9.54 9.54 1.258 3 1 1 0 538.2868 1532.8797 S1193s TMT10 1189 (K) TTKDsPQAAR (D) T(0.0)T(0.0)KDS(0.99)PQAAR K:TMT10,s:Phosphorylated S AKNA 155935.2 1 14 737.1 234.85 HUMAN 1 5.0202 25.8462 KSLADPGSSDDDDVS-p A8MW92;S881-p KSLADPGSSDDDDVS 0.958362880460048 0.112146275073429 0.00966666666666667 0.211666666666667 0.358359982334956 12.5397761272582 0.00966666666666666 0.211666666666667 0.920797224942681 0.055721447181965 0.104155921077343 2.42718253856714 A8MW92 PHF20L1 A8MW92.S881.p_PHF20L1 A8MW92_S881sS882s_2_2_881_882 A8MW92 A8MW92|F8W9L8 PHD finger protein 20-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22147.22147.3 18.36 14.68 1.152 5 2 2 0 1062.0914 3024.3214 S881s S882s TMT10 875 (K) SLADPGssDDDDVSSLEEEQEFHMR (S) S(0.0)LADPGS(0.99)S(0.99)DDDDVS(0.0)S(0.0)LEEEQEFHMR s:Phosphorylated S PHF20L1 116320.5 1 10 1882.1 109.28 HUMAN 1 0.3584 12.5398 KSLAKPETDKEQDSE-p P49321-3;T172-p KSLAKPETDKEQDSE 0.915943119887464 0.146775028717941 0.02 -0.209666666666667 0.747060348709127 10.9737618199902 0.02 -0.209666666666667 0.841964857749416 0.07991417456893 0.209169533691258 -2.15054638259631 P49321 NASP P49321.3.T172.p_NASP P49321-3_T172t _1_1_172_172 P49321-3 P49321-3 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11664.11664.4 12.97 12.97 2.265 3 1 1 0 741.1379 2881.5635 T172t TMT10 166 (K) SLAKPEtDKEQDSEMEK (G) S(0.0)LAKPET(0.99)DKEQDS(0.0)EMEK K:TMT10,t:Phosphorylated T NASP 86552 1 4 87.1 626.46 HUMAN 1 0.7471 -10.9738 KSLAPDRSDDEHDPL-p Q92614;S2020-p KSLAPDRSDDEHDPL 0.105885561453204 0.375667941554702 0.378 0.0896666666666667 20.5340579905308 5.64534520590711 0.378 0.0896666666666667 0.00884288955711466 0.272562107997198 3.9945139775867 1.22084245813235 Q92614 MYO18A Q92614.S2020.p_MYO18A Q92614_S2020s _1_1_2020_2020 Q92614 Q92614|Q92614-4|A0A0D9SFK2|Q92614-3|Q92614-2|Q92614-5 Unconventional myosin-XVIIIa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8403.8403.4 17.25 10.3 4.271 4 1 1 0 676.3153 2622.2706 S2020s TMT10 2014 (K) SLAPDRsDDEHDPLDNTSRPR (Y) S(0.0)LAPDRS(0.99)DDEHDPLDNT(0.0)S(0.0)RPR s:Phosphorylated S MYO18A 234309.1 3 13 783.1 225.59 HUMAN 1 20.5341 5.6453 KSLDFFRSMDDIDYK-p Q6P3S1;S596-p KSLDFFRSMDDIDYK 0.225563990023236 0.535973650192262 -0.196666666666667 -0.073 12.420156615518 3.64462637484021 -0.196666666666667 -0.0729999999999999 0.0572775375155892 0.432053335728666 -2.40708812776189 -0.848424784374388 Q6P3S1 DENND1B Q6P3S1.S596.p_DENND1B Q6P3S1_S596s _1_1_596_596 Q6P3S1 Q6P3S1 DENN domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25180.25180.4 17.21 17.21 3.839 4 1 1 0 740.6296 2879.5216 S596s TMT10 590 (K) SLDFFRsMDDIDYKPTNK (S) S(0.0)LDFFRS(0.99)MDDIDY(0.0)KPT(0.0)NK K:TMT10,s:Phosphorylated S DENND1B 87405.8 2 2 1975.1 104.63 HUMAN 1 -12.4202 -3.6446 KSLDSDESEDEEDDY-p Q13442;S63-p KSLDSDESEDEEDDY 0.901024890095893 0.00383473386221413 0.0243333333333333 0.710333333333333 0.887736111017483 35.7817138876847 0.0243333333333333 0.710333333333333 0.815129083537568 0.00026413661702023 0.245476195263399 8.38648913544311 Q13442 PDAP1 Q13442.S63.p_PDAP1 Q13442_S63s _1_1_63_63 Q13442 Q13442 28 kDa heat- and acid-stable phosphoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11964.12178.2 20.33 18.26 2.558 4 1 1 0 1285.5408 2490.1044 S63s TMT10 57 (K) SLDSDEsEDEEDDYQQK (R) S(0.0)LDS(0.0)DES(0.99)EDEEDDY(0.0)QQK K:TMT10,s:Phosphorylated S PDAP1 20629.7 5 3 1837.1 111.85 HUMAN 1 0.8877 35.7817 KSLEPEESPGKRHVQ-p Q9BVI0;S488-p KSLEPEESPGKRHVQ 0.550419028826415 0.00886318332464507 -0.085 -0.520666666666667 4.78399133505479 29.0784195518367 -0.085 -0.520666666666667 0.332353966681928 0.00123639729094886 -1.06432052399438 -6.14720602044212 Q9BVI0 PHF20 Q9BVI0.S488.p_PHF20 Q9BVI0_S488s _1_1_488_488 Q9BVI0 Q9BVI0 PHD finger protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8021.8034.3 12.76 12.76 5.265 2 1 1 0 589.6409 1686.9427 S488s TMT10 482 (K) SLEPEEsPGKR (H) S(0.0)LEPEES(0.99)PGKR K:TMT10,s:Phosphorylated S PHF20 116810 3 4 1726.1 119.34 HUMAN 1 -4.784 -29.0784 KSLESINSRLQLVMK-p P62888;S16-p KSLESINSRLQLVMK 0.712409426895854 0.142341815400068 -0.05 0.163333333333333 2.77030719206939 11.1577108527278 -0.05 0.163333333333333 0.528407874268417 0.0766000255915051 -0.673360073680151 2.18276186446117 P62888 RPL30 P62888.S16.p_RPL30 P62888_S16s _1_1_16_16 P62888 P62888|A0A0C4DH44|E5RJH3 60S ribosomal protein L30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25377.25377.3 11.73 11.73 2.272 3 1 1 0 719.4026 2076.2251 S16s TMT10 10 (K) SLESINsRLQLVMK (S) S(0.0)LES(0.0)INS(0.99)RLQLVMK K:TMT10,s:Phosphorylated S RPL30 12955 2 3 4915.1 25.12 HUMAN 1 -2.7703 11.1577 KSLGKDGSLEDDEDE-p Q12789;S1611-p KSLGKDGSLEDDEDE 0.291133775147169 0.331432132533936 -0.193666666666667 0.105333333333333 10.1041616761654 6.35393867416831 -0.193666666666667 0.105333333333333 0.0976301220835149 0.231529392680288 -1.99981285853945 1.34704044237035 Q12789 GTF3C1 Q12789.S1611.p_GTF3C1 Q12789_S1611s _1_1_1611_1611 Q12789 Q12789|Q12789-3 General transcription factor 3C polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18068.18091.4 20.72 20.72 2.171 2 1 1 0 848.3947 3310.5901 S1611s TMT10 1605 (K) SLGKDGsLEDDEDEEDDLDEGVGGK (R) S(0.0)LGKDGS(0.99)LEDDEDEEDDLDEGVGGK K:TMT10,s:Phosphorylated S GTF3C1 241209.8 2 8 225.1 425.73 HUMAN 1 -10.1042 6.3539 KSLGLSRSPVVSEQT-p Q8NEZ4-3;S1987-p KSLGLSRSPVVSEQT 0.17368064594083 0.296000571084545 -0.216666666666667 -0.121666666666667 15.146981223022 6.98028903378009 -0.216666666666667 -0.121666666666667 0.0305704532427476 0.200433862920498 -2.90606335321408 -1.45716102617976 Q8NEZ4 KMT2C Q8NEZ4.3.S1987.p_KMT2C Q8NEZ4-3_S1987s _1_1_1987_1987 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14345.14345.3 16.82 11.93 1.15 5 1 1 0 733.0718 2117.233 S1987s TMT10 1981 (K) SLGLSRsPVVSEQTAK (G) S(0.0)LGLS(0.0)RS(0.99)PVVS(0.0)EQT(0.0)AK K:TMT10,s:Phosphorylated S KMT2C 554869.1 2 13 88.1 626.31 HUMAN 1 -15.147 -6.9803 KSLIDNSSEIEDEDQ-p Q9Y2M0;S197-p KSLIDNSSEIEDEDQ 0.229977783899196 0.946416998636773 -0.190666666666667 -0.00699999999999997 12.2648048060068 0.341400757451411 -0.190666666666667 -0.00699999999999997 0.0593635028564393 0.924399973282494 -2.37939354289474 -0.0993899988656144 Q9Y2M0 FAN1 Q9Y2M0.S197.p_FAN1 Q9Y2M0_S197s _1_1_197_197 Q9Y2M0 Q9Y2M0|Q9Y2M0-2|H3BQ24 Fanconi-associated nuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25492.25492.3 16.83 16.83 1.189 5 1 1 0 1011.1516 2951.4733 S197s TMT10 191 (K) SLIDNSsEIEDEDQILENSSQK (E) S(0.0)LIDNS(0.0)S(0.99)EIEDEDQILENS(0.0)S(0.0)QK K:TMT10,s:Phosphorylated S FAN1 116048.4 2 4 1860.1 110.7 HUMAN 1 -12.2648 -0.3414 KSLLNKKSDGGVKPQ-p Q13555-8;S325-p KSLLNKKSDGGVKPQ 0.118673427068097 0.687771022557122 -0.275 -0.046 19.254675011021 2.22543345425295 -0.275 -0.046 0.0118722353941158 0.599041147409298 -3.72078985944482 -0.558099128277831 Q13555 CAMK2G Q13555.8.S325.p_CAMK2G Q13555-8_S325s _1_1_325_325 Q13555-8 Q13555-8|Q13555-2|Q13555-9|A0A0A0MS52 Isoform 8 of Calcium/calmodulin-dependent protein kinase type II subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11827.11827.4 10.09 10.09 10.089 3 1 1 0 785.7122 3059.855 S325s TMT10 319 (K) SLLNKKsDGGVKPQSNNK (N) S(0.0)LLNKKS(0.99)DGGVKPQS(0.0)NNK K:TMT10,s:Phosphorylated S CAMK2G 62905.2 3 7 1309.1 155.32 HUMAN 1 -19.2547 -2.2254 KSLLPVRSKEVDVSK-p Q9Y448;S117-p KSLLPVRSKEVDVSK 0.824173557805173 0.0016237919479163 -0.06 -1.049 1.61964275764041 44.5312624007354 -0.06 -1.049 0.688708945898947 3.52268459287378e-05 -0.422818555407286 -12.3700507184885 Q9Y448 KNSTRN Q9Y448.S117.p_KNSTRN Q9Y448_S117s _1_1_117_117 Q9Y448 Q9Y448|Q9Y448-2|Q9Y448-3|V9GY01 Small kinetochore-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14879.14879.3 10.76 2.83 2.828 2 1 1 0 479.9574 1357.8931 S117s TMT10 111 (K) SLLPVRsK (E) S(0.0)LLPVRS(0.99)K K:TMT10,s:Phosphorylated S KNSTRN 35723 1 1 3464.1 50.32 HUMAN 1 -1.6196 -44.5313 KSLLSNVSIEDEEEE-p Q5T5Y3-3;S545-p KSLLSNVSIEDEEEE 0.76910751951962 0.806933509655843 -0.043 0.0273333333333334 2.18777865637799 1.30390884444404 -0.043 0.0273333333333334 0.604257618011399 0.740643329121462 -0.549996771644987 0.348428632764812 Q5T5Y3 CAMSAP1 Q5T5Y3.3.S545.p_CAMSAP1 Q5T5Y3-3_S545s _1_1_545_545 Q5T5Y3-3 Q5T5Y3-3|Q5T5Y3-2 Isoform 3 of Calmodulin-regulated spectrin-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.36552.36552.3 25.29 25.29 3.827 3 1 1 0 851.7671 2473.3235 S545s TMT10 539 (K) SLLSNVsIEDEEEELVAIVR (A) S(0.0)LLS(0.0)NVS(0.99)IEDEEEELVAIVR s:Phosphorylated S CAMSAP1 180710.7 7 5 220.1 428.42 HUMAN 1 -2.1878 1.3039 KSLNLVDSPQPLLEK-p P46019;S735-p KSLNLVDSPQPLLEK 0.134150744259901 0.188902709053779 -0.470666666666667 0.197 17.9530413394886 9.51750647205505 -0.470666666666667 0.197 0.016021230401201 0.111750468567126 -3.45276800782509 1.89726650095199 P46019 PHKA2 P46019.S735.p_PHKA2 P46019_S735s _1_1_735_735 P46019 P46019 Phosphorylase b kinase regulatory subunit alpha, liver isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26728.26728.3 13.43 13.43 7.893 2 1 1 0 697.7216 2011.184 S735s TMT10 729 (K) SLNLVDsPQPLLEK (V) S(0.0)LNLVDS(0.99)PQPLLEK K:TMT10,s:Phosphorylated S PHKA2 139489.6 1 3 2510.1 80.53 HUMAN 1 -17.953 9.5175 KSLQVKSSPVVNDGV-p Q12849;S244-p KSLQVKSSPVVNDGV 0.287161977647915 0.167788200693427 0.418666666666667 -0.329333333333333 10.2175084643992 10.1982853189576 0.418666666666667 -0.329333333333333 0.0951150309499899 0.0955369710542694 2.01952573541714 -2.01534815371547 Q12849 GRSF1 Q12849.S244.p_GRSF1 Q12849_S244s _1_1_244_244 Q12849 Q12849 G-rich sequence factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10356.10356.2 12.05 5.44 1.385 2 1 1 0 719.3676 1357.7637 S244s TMT10 243 (K) SsPVVNDGVVR (L) S(0.0)S(0.99)PVVNDGVVR s:Phosphorylated S GRSF1 53638.9 3 1 5023.1 23.79 HUMAN 1 10.2175 -10.1983 KSLSDSESDDSKSKK-p Q13185;S99-p KSLSDSESDDSKSKK 0.184467072708793 0.405351375147859 0.372333333333333 -0.139666666666667 14.4332797402216 5.21966264485537 0.372333333333333 -0.139666666666667 0.0360306441118123 0.300630982037639 2.77282256862408 -1.14392441897209 Q13185 CBX3 Q13185.S99.p_CBX3 Q13185_S99s _1_1_99_99 Q13185 Q13185 Chromobox protein homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8482.8482.3 11.32 11.32 1.264 5 1 1 0 569.9294 1627.8063 S99s TMT10 93 (K) SLSDSEsDDSK (S) S(0.0)LS(0.0)DS(0.0)ES(0.99)DDS(0.0)K K:TMT10,s:Phosphorylated S CBX3 20982.2 4 11 1104.2 177.13 HUMAN 1 14.4333 -5.2197 KSLSPGVSRDSSTSY-p Q9UKV3;S661-p KSLSPGVSRDSSTSY 0.0721955710812666 0.110780589782491 1.82166666666667 -1.01 24.5595343386004 12.6155411254291 1.82166666666667 -1.01 0.00349982691035601 0.0547577869201564 4.93307843103436 -2.44072271100192 Q9UKV3 ACIN1 Q9UKV3.S661.p_ACIN1 Q9UKV3_S661s _1_1_661_661 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8378.8378.3 10.45 4.9 1.675 3 1 1 0 490.2814 1388.8626 S661s TMT10 654 (R) KSLSPGVsR (D) KS(0.0)LS(0.0)PGVS(0.99)R K:TMT10,s:Phosphorylated S ACIN1 152258.2 1 21 32.2 899.18 HUMAN 1 24.5595 -12.6155 KSLVKWESENKMVCE-p P29373;S90-p KSLVKWESENKMVCE 0.800379409372004 0.0543386013644106 0.0416666666666667 0.316 1.86216794999572 16.8617901816169 0.0416666666666667 0.316 0.651303189553283 0.0205978068728231 0.478057065928625 3.23302399540891 P29373 CRABP2 P29373.S90.p_CRABP2 P29373_S90s _1_1_90_90 P29373 P29373 Cellular retinoic acid-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16567.16567.3 13.54 13.54 13.535 2 1 1 0 663.0348 1907.1205 S90s TMT10 84 (K) SLVKWEsENK (M) S(0.0)LVKWES(0.99)ENK K:TMT10,s:Phosphorylated S CRABP2 15863.9 3 2 4870.1 25.61 HUMAN 1 1.8622 16.8618 KSMPVLGSVSSVTKT-p A0MZ66-3;S512-p KSMPVLGSVSSVTKT 0.997012593716721 0.754975517398065 0.000666666666666667 0.0316666666666667 0.0227631534692523 1.68787749332276 0.000666666666666691 0.0316666666666667 0.994772302435899 0.677972769049237 0.00686007809781288 0.43846632728086 A0MZ66 SHTN1 A0MZ66.3.S512.p_SHTN1 A0MZ66-3_S512s _1_1_512_512 A0MZ66-3 A0MZ66-3|A0MZ66-6|A0MZ66-5|A0MZ66-4 Isoform 3 of Shootin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23312.23312.3 8.95 8.95 1.376 5 1 1 0 610.6662 1750.0185 S512s TMT10 506 (K) SMPVLGsVSSVTK (T) S(0.0)MPVLGS(0.99)VS(0.0)S(0.0)VT(0.0)K K:TMT10,s:Phosphorylated S SHTN1 74064.4 1 8 838.1 214.92 HUMAN 1 0.0228 1.6879 KSMSVYCTPNKPSRT-p P16615;T499-p KSMSVYCTPNKPSRT 0.928692176788334 0.124245590642598 -0.0156666666666667 -0.161333333333333 0.637572055217355 11.9482580458128 -0.0156666666666667 -0.161333333333333 0.863461135076504 0.063851954487999 -0.180321389312782 -2.3220076578611 P16615 ATP2A2 P16615.T499.p_ATP2A2 P16615_T499t _1_1_499_499 P16615 P16615|P16615-4|P16615-3|P16615-2|P16615-5 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10957.10957.3 10.2 10.2 10.198 5 1 1 0 689.0056 1985.0349 T499t TMT10 493 (K) SMSVYCtPNKPSR (T) S(0.0)MS(0.0)VY(0.0)CT(0.99)PNKPS(0.0)R C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ATP2A2 116409.4 2 6 1240.1 162.94 HUMAN 1 -0.6376 -11.9483 KSNGLEGSWSGNVTQ-p Q92613;S672-p KSNGLEGSWSGNVTQ 0.205202263113483 0.239367034807095 -0.23 0.126333333333333 13.3022364564369 8.1805990825534 -0.23 0.126333333333333 0.0467494336945041 0.152033779400969 -2.56567363310667 1.66593534204545 Q92613 JADE3 Q92613.S672.p_JADE3 Q92613_S672s _1_1_672_672 Q92613 Q92613 Protein Jade-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16453.16453.3 14.19 11.22 1.638 4 1 1 0 701.3474 2022.0656 S672s TMT10 666 (K) SNGLEGsWSGNVTQK (D) S(0.0)NGLEGS(0.99)WS(0.0)GNVT(0.0)QK K:TMT10,s:Phosphorylated S JADE3 95461.1 2 4 1439.1 142.43 HUMAN 1 -13.3022 8.1806 KSNKHSESPGATELN-p Q6P0N0;S541-p KSNKHSESPGATELN 0.863722288203399 0.0755701317794049 0.0286666666666667 -0.287333333333333 1.24014610950899 14.8878999433605 0.0286666666666667 -0.287333333333333 0.751597607626306 0.0324496491614258 0.333077208926692 -2.85560669293571 Q6P0N0 MIS18BP1 Q6P0N0.S541.p_MIS18BP1 Q6P0N0_S541s _1_1_541_541 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8652.8652.4 19.81 19.81 1.167 5 1 1 0 827.3861 3226.5556 S541s TMT10 538 (K) HSEsPGATELNMCHSNCQNKPTLR (F) HS(0.0)ES(0.99)PGAT(0.0)ELNMCHS(0.0)NCQNKPT(0.0)LR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MIS18BP1 129996 2 18 54.1 728.39 HUMAN 1 1.2401 -14.8879 KSNKRSRSGSQGRTD-p Q5VTL8;S473-p KSNKRSRSGSQGRTD 0.342628074928273 0.0583015154404338 0.134 0.253333333333333 8.63921990095722 16.4466248174578 0.134 0.253333333333333 0.136797452519007 0.0226640499283821 1.74591057139392 3.15211882755873 Q5VTL8 PRPF38B Q5VTL8.S473.p_PRPF38B Q5VTL8_S473sS475s_2_2_473_475 Q5VTL8 Q5VTL8|A0A0A0MRN0 Pre-mRNA-splicing factor 38B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4834.4834.2 11.01 7.1 5.095 4 2 2 0 820.3497 1479.7601 S473s S475s Hydrogen 473 (R) sGsQGRTDSVEK (S) S(0.99)GS(0.99)QGRT(0.0)DS(0.0)VEK K:TMT10-Lys-Only,s:Phosphorylated S PRPF38B 64695 4 6 2128.1 96.59 HUMAN 1 8.6392 16.4466 KSNSSFMSRERELLG-p Q9BSJ8-2;S1077-p KSNSSFMSRERELLG 0.269890028838605 0.0246040586000292 -0.199 -0.301 10.7791024907848 21.8997497828211 -0.199 -0.301 0.0835775721072036 0.00645691429238771 -2.11745336790711 -4.29452755007486 Q9BSJ8 ESYT1 Q9BSJ8.2.S1077.p_ESYT1 Q9BSJ8-2_S1077s _1_1_1077_1077 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5732.5732.3 8.17 8.17 8.167 4 1 1 0 503.8954 1429.7055 S1077s TMT10 1071 (K) SNSSFMsRER (E) S(0.0)NS(0.0)S(0.0)FMS(0.99)RER s:Phosphorylated S ESYT1 124514 2 12 400.1 328.2 HUMAN 1 -10.7791 -21.8997 KSNSSKEYV______-p O95471;Y210-p KSNSSKEYV______ 0.253422222265936 0.240505705960235 0.433 -0.157333333333333 11.3640003275024 8.15409000071846 0.433 -0.157333333333333 0.073046593443581 0.152964622738322 2.22000642643984 -1.66134370062268 O95471 CLDN7 O95471.Y210.p_CLDN7 O95471_Y210y _1_1_210_210 O95471 O95471 Claudin-7 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8728.8864.2 10.66 10.66 8.224 4 1 1 0 726.3625 1371.752 Y210y TMT10 204 (K) SNSSKEyV (-) S(0.0)NS(0.0)S(0.0)KEY(0.99)V K:TMT10,y:Phosphorylated Y CLDN7 22874.6 2 1 326.1 10.66 HUMAN 1 11.364 -8.1541 KSNTEPQSPPIASPK-p P82094-2;S72-p KSNTEPQSPPIASPK 0.196108777103915 0.0240184507985401 -0.275 -0.445 13.7830889411386 22.0744891981061 -0.275 -0.445 0.0418495802013647 0.00620227588351332 -2.6531789485158 -4.33438040386593 P82094 TMF1 P82094.2.S72.p_TMF1 P82094-2_S72s _1_1_72_72 P82094-2 P82094-2|F8WF45 Isoform 2 of TATA element modulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11659.11659.2 15.66 15.66 4.653 4 1 1 0 996.0165 1911.0588 S72s TMT10 66 (K) SNTEPQsPPIASPK (A) S(0.0)NT(0.0)EPQS(0.99)PPIAS(0.0)PK K:TMT10,s:Phosphorylated S TMF1 123666.4 3 2 393.1 331.84 HUMAN 1 -13.7831 -22.0745 KSPDMQGSHQLLVVS-p Q6P1M3;S808-p KSPDMQGSHQLLVVS 0.952209593971326 0.566074165257503 -0.0113333333333333 0.0863333333333333 0.422392781087818 3.33307963770944 -0.0113333333333333 0.0863333333333333 0.907320496768586 0.464185998261844 -0.121975227340621 0.787171620843014 Q6P1M3 LLGL2 Q6P1M3.S808.p_LLGL2 Q6P1M3_S808s _1_1_808_808 Q6P1M3 Q6P1M3|J3QRV5|Q6P1M3-2 Lethal(2) giant larvae protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21691.21691.3 18.61 15.4 2.243 3 1 1 0 899.7834 2617.3696 S808s TMT10 802 (K) SPDMQGsHQLLVVSEEQFK (V) S(0.0)PDMQGS(0.99)HQLLVVS(0.0)EEQFK K:TMT10,s:Phosphorylated S LLGL2 114415.8 1 8 881.1 207.2 HUMAN 1 -0.4224 3.3331 KSPEEKLTPTSKQLL-p Q8IWA0;T678-p KSPEEKLTPTSKQLL 0.367145516370833 0.122471102821661 -0.167666666666667 -0.163333333333333 8.07607057156302 12.0283226733259 -0.167666666666667 -0.163333333333333 0.15573740820091 0.0626855921429774 -1.64835430680853 -2.33619033503342 Q8IWA0 WDR75 Q8IWA0.T678.p_WDR75 Q8IWA0_T678t _1_1_678_678 Q8IWA0 Q8IWA0 WD repeat-containing protein 75 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10408.10408.4 7.35 7.35 2.443 4 1 1 0 496.7805 1904.1308 T678t TMT10 672 (K) SPEEKLtPTSK (Q) S(0.0)PEEKLT(0.99)PT(0.0)S(0.0)K K:TMT10,t:Phosphorylated T WDR75 95980.4 2 2 1418.1 144.36 HUMAN 1 -8.0761 -12.0283 KSPFNSPSPQDSPRL-p P08651;S339-p KSPFNSPSPQDSPRL 0.106843101544198 0.0562616448654276 0.878666666666667 -0.305 20.4494397895736 16.6532157134168 0.878666666666667 -0.305 0.00901687441669008 0.0216111774151191 3.97607578790533 -3.19227056723881 P08651 NFIC P08651.S339.p_NFIC P08651_S339s _1_1_339_339 P08651 A0A286YEX4|P08651|P08651-2|P08651-6|P08651-3|P08651-5|P08651-4 Nuclear factor 1 C-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13854.13854.3 16.26 16.26 1.955 5 1 1 0 853.4048 2478.2335 S339s TMT10 328 (K) TEMDKSPFNSPsPQDSPR (L) T(0.0)EMDKS(0.0)PFNS(0.0)PS(0.99)PQDS(0.0)PR K:TMT10,s:Phosphorylated S NFIC 56130.4 10 11 674.1 247.72 HUMAN 1 20.4494 -16.6532 KSPFVRNTLERRTLR-p Q9ULE0;T942-p KSPFVRNTLERRTLR 0.537798351044736 0.162191003677492 0.262 -0.224333333333333 4.98065648141673 10.3857737591762 0.262 -0.224333333333333 0.31763938892847 0.0915003223543251 1.10051209717946 -2.04795510755384 Q9ULE0 WWC3 Q9ULE0.T942.p_WWC3 Q9ULE0_T942t _1_1_942_942 Q9ULE0 Q9ULE0 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9271.9271.4 9.34 9.34 9.336 2 1 1 0 472.0173 1805.0798 T942t TMT10 935 (R) KSPFVRNtLER (R) KS(0.0)PFVRNT(0.99)LER K:TMT10,t:Phosphorylated T WWC3 123814.7 1 27 161.1 495.35 HUMAN 1 4.9807 -10.3858 KSPHDSKSPLDHRSP-p O14647;S1801-p KSPHDSKSPLDHRSP 0.388392277021968 0.031937845110908 0.164 0.493 7.59949297580605 20.1960050671994 0.164 0.493 0.173800372299195 0.00955871456605936 1.56559579053853 3.91743035401537 O14647 CHD2 O14647.S1801.p_CHD2 O14647_S1801s _1_1_1801_1801 O14647 O14647 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4027.4027.4 11.31 11.31 1.103 3 1 1 0 479.2468 1833.9972 S1801s TMT10 1795 (K) SPHDSKsPLDHR (S) S(0.0)PHDS(0.0)KS(0.99)PLDHR K:TMT10,s:Phosphorylated S CHD2 212309.6 1 8 482.1 298.11 HUMAN 1 7.5995 20.196 KSPIINESRSRDRGK-p Q13523;S283-p KSPIINESRSRDRGK 0.176527526104725 0.0282928627273433 -0.248333333333333 0.411333333333333 14.9406912934213 20.977856663053 -0.248333333333333 0.411333333333333 0.0320575900337824 0.00798388612056363 -2.86733515858428 4.08795668107038 Q13523 PRPF4B Q13523.S283.p_PRPF4B Q13523_S283s _1_1_283_283 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5716.5921.3 11.34 11.34 1.853 2 1 1 0 570.6626 1630.0052 S283s Hydrogen 275 (R) KKSPIINEsR (S) KKS(0.0)PIINES(0.99)R K:TMT10-Lys-Only,s:Phosphorylated S PRPF4B 117327.1 2 12 70.1 666.55 HUMAN 1 -14.9407 20.9779 KSPILLGSLAHQIYR-p P31937;S304-p KSPILLGSLAHQIYR 0.957485115024456 0.985535932604879 0.00933333333333333 0.00233333333333334 0.367609163304675 0.093927948159508 0.00933333333333333 0.00233333333333334 0.918838287395722 0.978604492569496 0.106743497506367 0.0280779333381282 P31937 HIBADH P31937.S304.p_HIBADH P31937_S304s _1_1_304_304 P31937 P31937 3-hydroxyisobutyrate dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25759.25759.3 12.91 12.91 12.906 3 1 1 0 626.3486 1797.0584 S304s TMT10 298 (K) SPILLGsLAHQIYR (M) S(0.0)PILLGS(0.99)LAHQIY(0.0)R s:Phosphorylated S HIBADH 35727.7 1 1 6240.1 12.91 HUMAN 1 0.3676 0.0939 KSPKPAESPQSATKQ-p Q5VUA4;S1043-p KSPKPAESPQSATKQ 0.719529968451986 0.0529355983987602 0.0506666666666667 -0.232 2.6982314136422 17.0216668753461 0.0496998641152658 -0.232 0.53725053747024 0.0198533277610232 0.658423696170719 -3.26441208667796 Q5VUA4 ZNF318 Q5VUA4.S1043.p_ZNF318 Q5VUA4_S1043s _1_1_1043_1043 Q5VUA4 Q5VUA4|Q5VUA4-2 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7334.7334.3 15 13.53 2.551 4 1 1 0 699.0514 2015.174 S1043s TMT10 1037 (K) SPKPAEsPQSATK (Q) S(0.0)PKPAES(0.99)PQS(0.0)AT(0.0)K K:TMT10,s:Phosphorylated S ZNF318 252762.4 3 18 37.1 870.88 HUMAN 1 2.6982 -17.0217 KSPKRPASPSSPEHL-p Q9H7L9;S234-p KSPKRPASPSSPEHL 0.41751649911322 0.0649865517810917 0.114 0.263666666666667 7.00186242823999 15.7968815343015 0.114 0.263666666666667 0.19944068502189 0.0263215734265569 1.46133921665496 3.02718041256885 Q9H7L9 SUDS3 Q9H7L9.S234.p_SUDS3 Q9H7L9_S228sS234s_2_2_228_234 Q9H7L9 Q9H7L9 Sin3 histone deacetylase corepressor complex component SDS3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12786.12786.5 17.48 11.08 2.095 6 2 2 0 838.2368 4027.2444 S228s S234s TMT10 226 (K) LKsPKRPAsPSSPEHLPATPAESPAQRFEAR (I) LKS(0.99)PKRPAS(0.99)PS(0.0)S(0.0)PEHLPAT(0.0)PAES(0.0)PAQRFEAR K:TMT10,s:Phosphorylated S SUDS3 38249.6 12 5 1096.1 178.23 HUMAN 1 7.0019 15.7969 KSPKSPRSPLEATRK-p Q92610;S334-p KSPKSPRSPLEATRK 0.809924688163494 0.0573068633826008 -0.04 0.322333333333333 1.76025832330708 16.5456009597817 -0.04 0.322333333333333 0.666767107966652 0.0221533752532764 -0.45502971283553 3.1713289006512 Q92610 ZNF592 Q92610.S334.p_ZNF592 Q92610_S334s _1_1_334_334 Q92610 Q92610|H0YM74 Zinc finger protein 592 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5140.5140.2 9.67 1.85 7.28 2 1 1 0 605.8228 1130.6731 S334s Hydrogen 334 (R) sPLEATRK (S) S(0.99)PLEAT(0.0)RK K:TMT10-Lys-Only,s:Phosphorylated S ZNF592 140207.3 2 6 164.1 494.76 HUMAN 1 -1.7603 16.5456 KSPKTAQSPAMVGSP-p Q5VWG9;S291-p KSPKTAQSPAMVGSP 0.416022975797615 0.0746300329356068 0.109666666666667 0.270666666666667 7.0286711247676 14.9590875004824 0.109666666666667 0.270666666666667 0.198213343578674 0.0319220850205723 1.46603101364947 2.86891568891814 Q5VWG9 TAF3 Q5VWG9.S291.p_TAF3 Q5VWG9_S291s _1_1_291_291 Q5VWG9 Q5VWG9 Transcription initiation factor TFIID subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13320.13320.2 13.56 13.56 2.542 3 1 1 0 812.4119 1543.8464 S291s TMT10 288 (K) TAQsPAMVGSPIR (S) T(0.0)AQS(0.99)PAMVGS(0.0)PIR s:Phosphorylated S TAF3 104321.6 1 5 699.1 240.69 HUMAN 1 7.0287 14.9591 KSPLDHRSPLERSLE-p O14647;S1807-p KSPLDHRSPLERSLE 0.0668943695218107 0.0137719194356848 -0.394333333333333 0.502 25.3050439034136 25.8449602359495 -0.394333333333333 0.502 0.00294778367691401 0.00260317866599754 -5.12145222188081 5.2541633598488 O14647 CHD2 O14647.S1807.p_CHD2 O14647_S1807s _1_1_1807_1807 O14647 O14647 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6361.6361.3 10.54 7.46 1.836 2 1 1 0 539.2764 1535.8492 S1807s TMT10 1801 (K) SPLDHRsPLER (S) S(0.0)PLDHRS(0.99)PLER s:Phosphorylated S CHD2 212309.6 1 9 482.1 298.11 HUMAN 1 -25.305 25.845 KSPPLLESPDATRES-p Q15036;S421-p KSPPLLESPDATRES 0.225581676801601 0.0308357763925434 -0.189 -0.278 12.4172929481579 20.4223638619622 -0.189 -0.278 0.0573153178491417 0.00907326538522252 -2.4065770223616 -3.96637428212894 Q15036 SNX17 Q15036.S421.p_SNX17 Q15036_S421s _1_1_421_421 Q15036 Q15036|Q15036-2 Sorting nexin-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18571.18571.3 11.24 8.83 2.221 4 1 1 0 799.0848 2315.2681 S421s TMT10 415 (K) SPPLLEsPDATRESMVK (L) S(0.0)PPLLES(0.99)PDAT(0.0)RES(0.0)MVK K:TMT10,s:Phosphorylated S SNX17 53185.6 6 5 1175.1 169.84 HUMAN 1 -12.4173 -20.4224 KSPPREGSQGELTPA-p A8K070;S509-p KSPPREGSQGELTPA 0.213941118182198 0.562571114172468 0.187 -0.0776666666666666 12.9094837723737 3.36555242612358 0.187 -0.0776666666666666 0.0511742660627863 0.460728159965042 2.4947691063162 -0.793611136846601 A8K070 NotFound A8K070.S509.p_NotFound A8K070_S509s _1_1_509_509 A8K070 Q13098-7|A8K070|A0A096LPJ3 COP9 signalosome complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6083.6282.3 11.57 11.57 1.522 5 1 1 0 769.7019 2227.1265 S509s TMT10 503 (K) SPPREGsQGELTPANSQSR (M) S(0.0)PPREGS(0.99)QGELT(0.0)PANS(0.0)QS(0.0)R s:Phosphorylated S GPS1 59605.7 1 5 2547.1 79 HUMAN 1 12.9095 -3.3656 KSPPVLGSAAASPVH-p O00512;S913-p KSPPVLGSAAASPVH 0.0924294679564733 0.0616110019365502 0.326 0.242 22.0172740997458 16.1153968913129 0.326 0.242 0.00628452690749323 0.0244602172977626 4.32588056087189 3.08817752790771 O00512 BCL9 O00512.S913.p_BCL9 O00512_S913sS917s_2_2_913_917 O00512 O00512 B-cell CLL/lymphoma 9 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21182.21182.3 11.2 5.68 4.504 3 2 2 0 717.0448 1989.1897 S913s S917s TMT10 907 (K) SPPVLGsAAAsPVHLK (S) S(0.0)PPVLGS(0.99)AAAS(0.99)PVHLK K:TMT10,s:Phosphorylated S BCL9 149515.8 2 19 313.1 369.9 HUMAN 1 22.0173 16.1154 KSPQISMSDIDLNLK-p Q09666;S4522-p KSPQISMSDIDLNLK 0.761770448655304 0.355999663068042 0.0473333333333333 0.110666666666667 2.26310576100334 5.94946022860664 0.0473333333333333 0.110666666666667 0.593867315639506 0.25412885349395 0.566311287097494 1.27525411703643 Q09666 AHNAK Q09666.S4522.p_AHNAK Q09666_S4522s _1_1_4522_4522 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29149.29149.2 16.5 14.32 1.262 3 1 1 0 1050.047 2019.1196 S4522s TMT10 4516 (K) SPQISMsDIDLNLK (G) S(0.0)PQIS(0.0)MS(0.99)DIDLNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 12 99 1.1 4313.36 HUMAN 1 2.2631 5.9495 KSPRKEESDEEETAS-p Q9BY89;S1701-p KSPRKEESDEEETAS 0.253185624491412 0.643868102151991 -0.211 0.044 11.3756802067841 2.60630041158163 -0.211 0.0449798674507441 0.0728504064793704 0.548744220066196 -2.22206113421678 0.639163534016138 Q9BY89 KIAA1671 Q9BY89.S1701.p_KIAA1671 Q9BY89_S1701s _1_1_1701_1701 Q9BY89 Q9BY89|A0A1B0GVJ7|Q9BY89-2 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6530.6530.2 15.4 15.4 4.496 3 1 1 0 1075.0291 2069.0853 S1701s TMT10 1698 (R) KEEsDEEETASK (A) KEES(0.99)DEEET(0.0)AS(0.0)K K:TMT10,s:Phosphorylated S KIAA1671 197734.4 6 25 105.1 590.35 HUMAN 1 -11.3757 2.6063 KSPRRSSSDEQGLSY-p Q9NPH3;S557-p KSPRRSSSDEQGLSY 0.350268977614123 0.50016824959472 0.133 0.0893333333333334 8.46537271367523 4.02683154619872 0.133 0.0893333333333334 0.142384504631563 0.39565517034818 1.71581041769636 0.922098061932799 Q9NPH3 IL1RAP Q9NPH3.S557.p_IL1RAP Q9NPH3_S557s _1_1_557_557 Q9NPH3 Q9NPH3 Interleukin-1 receptor accessory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16448.16448.2 13.38 13.38 1.134 7 1 1 0 1013.4906 1946.0119 S557s TMT10 555 (R) SSsDEQGLSYSSLK (N) S(0.0)S(0.0)S(0.99)DEQGLS(0.0)Y(0.0)S(0.0)S(0.0)LK K:TMT10,s:Phosphorylated S IL1RAP 66158.9 10 1 4489.1 30.77 HUMAN 1 8.4654 4.0268 KSPRRTRSRSPLGFY-p Q8IXT5;S278-p KSPRRTRSRSPLGFY 0.607998450414681 0.185576010457177 -0.1645 0.534166666666667 4.00269171591508 9.61856605462387 -0.1645 0.534166666666667 0.39786050396227 0.109180076567194 -0.917644099806538 1.91477036304226 Q8IXT5 RBM12B Q8IXT5.S278.p_RBM12B Q8IXT5_S278sS280s_2_2_278_280 Q8IXT5 Q8IXT5|B9ZVT1 RNA-binding protein 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21772.21979.3 15.46 9.15 3.762 3 2 2 0 598.2976 1632.9423 S278s S280s Hydrogen 278 (R) sRsPLGFYVHLK (N) S(0.99)RS(0.99)PLGFY(0.0)VHLK K:TMT10-Lys-Only,s:Phosphorylated S RBM12B 118442.9 9 14 384.1 333.8 HUMAN 2 -4.0027 9.6186 KSPSRTLSPGRRAKS-p Q13523;S387-p KSPSRTLSPGRRAKS 0.914747875093277 0.261693286632678 0.0386666666666666 0.253333333333333 0.758436257528643 7.67098791089974 0.0386666666666667 0.253333333333333 0.839762301111347 0.170962637378159 0.212136494656445 1.57754974792315 Q13523 PRPF4B Q13523.S387.p_PRPF4B Q13523_S387s _1_1_387_387 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.1840.2265.2 7.06 7.06 1.855 2 1 1 0 433.7157 786.4581 S387s Hydrogen 385 (R) TLsPGRR (A) T(0.0)LS(0.99)PGRR s:Phosphorylated S PRPF4B 117327.1 6 20 70.1 666.55 HUMAN 1 0.7584 7.671 KSPSSQETHDSPFCL-p Q8TB45;T241-p KSPSSQETHDSPFCL 0.0969394664773803 0.021858718351658 0.470333333333333 0.479 21.5042926305909 22.691562542013 0.470333333333333 0.479 0.00707246386054051 0.0053807615402246 4.20948484712853 4.47696191942648 Q8TB45 DEPTOR Q8TB45.T241.p_DEPTOR Q8TB45_T241t _1_1_241_241 Q8TB45 Q8TB45|Q8TB45-2 DEP domain-containing mTOR-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11721.11721.4 16.42 16.42 1.878 5 1 1 0 604.2956 2334.1913 T241t TMT10 235 (K) SPSSQEtHDSPFCLRK (Q) S(0.0)PS(0.0)S(0.0)QET(0.99)HDS(0.0)PFCLRK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T DEPTOR 46806.5 3 4 1526.1 133.99 HUMAN 1 21.5043 22.6916 KSPTPRVYGTIKPAF-p Q9UPX8-3;Y917-p KSPTPRVYGTIKPAF 0.378389324662461 0.0787037746188951 -0.178 -0.350666666666667 7.8006323825668 14.6558228813251 -0.178 -0.350666666666667 0.165934527014613 0.034230852242793 -1.60055552025718 -2.81236249689272 Q9UPX8 SHANK2 Q9UPX8.3.Y917.p_SHANK2 Q9UPX8-3_Y917y _1_1_917_917 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6|Q9UPX8-4|E7EUA2 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.19270.19270.4 13.99 13.99 1.557 3 1 1 0 619.8491 2396.3905 Y917y TMT10 916 (R) VyGTIKPAFNQNSAAK (V) VY(0.99)GT(0.0)IKPAFNQNS(0.0)AAK K:TMT10,y:Phosphorylated Y SHANK2 202341.2 4 1 40.1 49 HUMAN 1 -7.8006 -14.6558 KSPTQGST_______-p Q6P582;T158-p KSPTQGST_______ 0.881304394235846 0.00372619220137502 0.0323333333333333 -0.657666666666667 1.07855655455067 36.031358867634 0.0323333333333333 -0.657666666666667 0.780089342301303 0.000249381431321251 0.293469070447855 -8.48175418059598 Q6P582 MZT2A Q6P582.T158.p_MZT2A Q6P582_T158t _1_1_158_158 Q6P582 Q6P582 Mitotic-spindle organizing protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5337.5337.2 11.8 11.8 1.261 4 1 1 0 834.9222 1588.8695 T158t TMT10 146 (K) GGGPGKSPTQGSt (-) GGGPGKS(0.0)PT(0.0)QGS(0.0)T(0.99) K:TMT10,t:Phosphorylated T MZT2A 16277.4 3 7 2354.1 86.87 HUMAN 1 1.0786 -36.0314 KSPTRGST_______-p B8ZZ87;T218-p KSPTRGST_______ 0.261879568174724 0.00657538228744706 0.471 -1.564 11.0318974101391 31.3712091086641 0.471 -1.564 0.0788515543988141 0.000729254452037841 2.1616984441237 -6.84889679615796 B8ZZ87 MZT2B B8ZZ87.T218.p_MZT2B B8ZZ87_T218t _1_1_218_218 B8ZZ87 B8ZZ87|Q6NZ67 Mitotic-spindle organizing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.3977.3977.3 7.74 7.74 7.737 4 1 1 0 566.2976 1616.912 T218t TMT10 206 (K) GGGPGKSPTRGSt (-) GGGPGKS(0.0)PT(0.0)RGS(0.0)T(0.99) K:TMT10,t:Phosphorylated T MZT2B 22452.3 2 3 2354.2 86.87 HUMAN 1 11.0319 -31.3712 KSPTTTQSPKSSFLA-p Q14669-3;S1084-p KSPTTTQSPKSSFLA 0.253428545649867 0.00298089814036961 0.371333333333333 -1.03366666666667 11.3588791860967 37.9922669479614 0.371333333333333 -1.03366666666667 0.0731327797970134 0.000158771776889516 2.21910561251086 -9.26396927917656 Q14669 TRIP12 Q14669.3.S1084.p_TRIP12 Q14669-3_S1084s _1_1_1084_1084 Q14669-3 Q14669-3|Q14669-2|Q14669-4 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5774.5774.2 11.16 3.75 2.136 5 1 1 0 742.8922 1404.8099 S1084s TMT10 1078 (K) SPTTTQsPK (S) S(0.0)PT(0.0)T(0.0)T(0.0)QS(0.99)PK K:TMT10,s:Phosphorylated S TRIP12 227456.1 4 14 234.1 420.47 HUMAN 1 11.3589 -37.9923 KSQAEPLSGNKEPLA-p P49750-4;S860-p KSQAEPLSGNKEPLA 0.265858706914952 0.315668058861315 0.365666666666667 -0.153 10.9042145083975 6.61632494430124 0.365666666666667 -0.153 0.0812042106564021 0.217955335826213 2.13933682450959 -1.39330720527968 P49750 YLPM1 P49750.4.S860.p_YLPM1 P49750-4_S860s _1_1_860_860 P49750-4 P49750-4|P49750-3 Isoform 4 of YLP motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12983.12983.4 10.73 11.56 1.213 5 1 1 0 774.9022 3016.6154 S860s TMT10 854 (K) SQAEPLsGNKEPLADTSSNQQK (N) S(0.0)QAEPLS(0.99)GNKEPLADT(0.0)S(0.0)S(0.0)NQQK K:TMT10,s:Phosphorylated S YLPM1 241869.3 1 6 669.1 249.34 HUMAN 1 10.9042 -6.6163 KSQAKPGTPGGTGGP-p P54760;T976-p KSQAKPGTPGGTGGP 0.48046826185149 0.153145505248454 0.106 -0.17 5.85950905798586 10.717144989352 0.106 -0.17 0.259447263400748 0.084778455650045 1.25949558441477 -2.10570480870735 P54760 EPHB4 P54760.T976.p_EPHB4 P54760_T976t _1_1_976_976 P54760 P54760|Q96L35 Ephrin type-B receptor 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10865.10865.2 13.62 13.62 1.793 4 1 1 0 1105.0583 2129.1391 T976t TMT10 970 (K) SQAKPGtPGGTGGPAPQY (-) S(0.0)QAKPGT(0.99)PGGT(0.0)GGPAPQY(0.0) K:TMT10,t:Phosphorylated T EPHB4 109808.7 2 5 2355.1 86.87 HUMAN 1 5.8595 -10.7171 KSQDVAVSPQQQQCS-p Q96F86;S131-p KSQDVAVSPQQQQCS 0.0635370415880919 0.00428018915239182 -0.472666666666667 -0.555 25.9116941797068 34.8210100700305 -0.472666666666667 -0.555 0.00256348382820912 0.000329533061381034 -5.27844897830271 -8.02855279370717 Q96F86 EDC3 Q96F86.S131.p_EDC3 Q96F86_S131s _1_1_131_131 Q96F86 Q96F86 Enhancer of mRNA-decapping protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8332.8332.2 17.33 17.33 6.314 3 1 1 0 1114.5461 2148.1119 S131s TMT10 125 (K) SQDVAVsPQQQQCSK (S) S(0.0)QDVAVS(0.99)PQQQQCS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EDC3 56818.2 2 1 2217.1 93.04 HUMAN 1 -25.9117 -34.821 KSQFCENSNDTVKLK-p Q14207;S554-p KSQFCENSNDTVKLK 0.306684187031916 0.125857016432335 0.163 -0.180666666666667 9.60697833381627 11.8689030542596 0.163 -0.180666666666667 0.109471776696038 0.0650293921549523 1.91350248037248 -2.30796622986557 Q14207 NPAT Q14207.S554.p_NPAT Q14207_S554s _1_1_554_554 Q14207 Q14207 Protein NPAT HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9822.9822.3 13.47 13.47 2.73 3 1 1 0 775.3909 2244.1897 S554s TMT10 547 (K) KSQFCENsNDTVK (L) KS(0.0)QFCENS(0.99)NDT(0.0)VK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NPAT 155599.6 2 3 1274.1 159.34 HUMAN 1 9.607 -11.8689 KSQGAGSSPRRPQGG-p Q96IQ9-2;S296-p KSQGAGSSPRRPQGG 0.953576544254707 0.546511458965829 -0.00900000000000002 -0.0773333333333333 0.405381393467352 3.52945941005128 -0.00900000000000001 -0.0773333333333333 0.910881455971665 0.44366386574749 -0.117262650317502 -0.825916107806735 Q96IQ9 ZNF414 Q96IQ9.2.S296.p_ZNF414 Q96IQ9-2_S296s _1_1_296_296 Q96IQ9-2 Q96IQ9-2 Isoform 2 of Zinc finger protein 414 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.3067.3067.3 7.58 4.07 1.448 3 1 1 0 504.9355 1432.8272 S296s TMT10 289 (K) KSQGAGSsPR (R) KS(0.0)QGAGS(0.0)S(0.99)PR K:TMT10,s:Phosphorylated S ZNF414 41678.4 4 3 2703.1 73.44 HUMAN 1 -0.4054 -3.5295 KSQNSQESTADESED-p Q9BXW9;S1407-p KSQNSQESTADESED 0.248650960362662 0.992893895799708 -0.416666666666667 -0.00166666666666663 11.5379733827452 0.0440042383215225 -0.416666666666667 -0.00166666666666666 0.0701782706022327 0.989918809008848 -2.25064162877364 -0.0132282322254316 Q9BXW9 FANCD2 Q9BXW9.S1407.p_FANCD2 Q9BXW9_S1407sT1408tS1412s_3_3_1407_1412 Q9BXW9 Q9BXW9-1 Fanconi anemia group D2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9667.9667.3 12.8 12.8 3.505 8 3 3 0 1020.3893 2819.2525 S1407s T1408t S1412s TMT10 1401 (K) SQNSQEstADEsEDDMSSQASK (S) S(0.0)QNS(0.0)QES(0.99)T(0.99)ADES(0.99)EDDMS(0.0)S(0.0)QAS(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T FANCD2 165894.1 1 12 960.1 194.41 HUMAN 1 -11.538 -0.044 KSQPRKKSPPVKAVP-p Q99941;S546-p KSQPRKKSPPVKAVP 0.196344324530871 0.199558293056125 0.336666666666667 0.243666666666667 13.7731691767216 9.20828125847315 0.336666666666667 0.243666666666667 0.0419452785041245 0.119997410477671 2.65136563652524 1.84374340150788 Q99941 ATF6B Q99941.S546.p_ATF6B Q99941_S546s _1_1_546_546 Q99941 Q99941 Cyclic AMP-dependent transcription factor ATF-6 beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7653.7653.4 8.93 3.84 99 1 1 1 0 445.7875 1700.1604 S546s TMT10 544 (R) KKsPPVK (A) KKS(1.0)PPVK K:TMT10,s:Phosphorylated S ATF6B 77278.4 1 2 4458.1 31.1 HUMAN 1 13.7732 9.2083 KSQRMRISTEFSKLH-p Q9C037;S200-p KSQRMRISTEFSKLH 0.113413178970906 0.069932730379747 -0.561333333333333 -0.239666666666667 19.7204753158756 15.3640278734278 -0.561333333333333 -0.239666666666667 0.0106647939344563 0.0290801881873749 -3.81921650939337 -2.94502860174264 Q9C037 TRIM4 Q9C037.S200.p_TRIM4 Q9C037_S200s _1_1_200_200 Q9C037 Q9C037|Q9C037-2|Q9C037-3 E3 ubiquitin-protein ligase TRIM4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16681.16681.3 7.08 7.08 1.131 3 1 1 0 546.2898 1556.8871 S200s TMT10 197 (R) MRIsTEFSK (L) MRIS(0.99)T(0.0)EFS(0.0)K K:TMT10,s:Phosphorylated S TRIM4 58315.7 1 1 7268.1 7.08 HUMAN 1 -19.7205 -15.364 KSQTGDVSPKAQQPS-p Q9ULH1-2;S1011-p KSQTGDVSPKAQQPS 0.39023516020253 0.2759084266897 0.136666666666667 -0.167666666666667 7.55597651205701 7.36883426205447 0.136666666666667 -0.167666666666667 0.175550612389712 0.183280632020517 1.55802503523132 -1.52498985271534 Q9ULH1 ASAP1 Q9ULH1.2.S1011.p_ASAP1 Q9ULH1-2_S1011s _1_1_1011_1011 Q9ULH1-2 Q9ULH1-2|A0A0A0MRE5 Isoform 1 of Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13655.13655.3 16.82 14.2 2.345 5 1 1 0 923.1657 2687.5183 S1011s TMT10 1005 (K) SQTGDVsPKAQQPSEVTLK (S) S(0.0)QT(0.0)GDVS(0.99)PKAQQPS(0.0)EVT(0.0)LK K:TMT10,s:Phosphorylated S ASAP1 126865.1 4 8 801.1 222.95 HUMAN 1 7.556 -7.3688 KSREIFLSQPILLEL-p P62136;S48-p KSREIFLSQPILLEL 0.219002866960347 0.0599649405405911 -0.419333333333333 0.297 12.703723137805 16.2823449794489 -0.419333333333333 0.297 0.053657160480298 0.0235377801481067 -2.45781395976528 3.12033969748183 P62136 PPP1CA P62136.S48.p_PPP1CA P62136_S48s _1_1_48_48 P62136 P62136-2|P36873-2|F8W0W8|P62140 Serine/threonine-protein phosphatase PP1-alpha catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37743.37743.3 16.85 10.42 99 1 1 1 0 754.7576 2182.2936 S48s Hydrogen 44 (R) EIFLsQPILLELEAPLK (I) EIFLS(1.0)QPILLELEAPLK K:TMT10-Lys-Only,s:Phosphorylated S PPP1CA 38253.1 1 6 1839.1 111.78 HUMAN 1 -12.7037 16.2823 KSRHHYDSDEKSETR-p Q9BQ39;S41-p KSRHHYDSDEKSETR 0.338303322331957 0.0509179768383229 0.15 -0.254 8.75684342815743 17.2679397723437 0.15 -0.254 0.133142178038268 0.0187588418825017 1.76627220157663 -3.31302116149178 Q9BQ39 DDX50 Q9BQ39.S41.p_DDX50 Q9BQ39_S41s _1_1_41_41 Q9BQ39 Q9BQ39 ATP-dependent RNA helicase DDX50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3428.3428.4 14.53 14.53 5.579 4 1 1 0 453.9494 1732.8088 S41s Hydrogen 37 (R) HHYDsDEKSETR (E) HHY(0.0)DS(0.99)DEKS(0.0)ET(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S DDX50 83134.1 7 1 103.2 590.75 HUMAN 1 8.7568 -17.2679 KSRHRSRSLGVLPFT-p P42695;S1372-p KSRHRSRSLGVLPFT 0.0350618685416583 0.00235687401929515 -0.585333333333333 -0.752333333333333 33.8988344159548 40.3603451213051 -0.585333333333333 -0.752333333333334 0.000407489627495901 9.20376429185402e-05 -7.71183568796332 -10.294636830314 P42695 NCAPD3 P42695.S1372.p_NCAPD3 P42695_S1372s _1_1_1372_1372 P42695 P42695 Condensin-2 complex subunit D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28996.28996.3 16.56 16.56 6.31 4 1 1 0 652.3406 1875.0425 S1372s Hydrogen 1372 (R) sLGVLPFTLNSGSPEK (T) S(0.99)LGVLPFT(0.0)LNS(0.0)GS(0.0)PEK K:TMT10-Lys-Only,s:Phosphorylated S NCAPD3 171055.8 4 7 1254.1 161.61 HUMAN 1 -33.8988 -40.3603 KSRKHAASDVDLEIE-p Q86U44;S219-p KSRKHAASDVDLEIE 0.293521081094966 0.946416998636773 -0.208666666666667 0.00700000000000002 10.0457274293538 0.341400757451413 -0.208666666666667 0.00700000000000002 0.0989526107532488 0.924399973282494 -1.98965601370372 0.0993899988656151 Q86U44 METTL3 Q86U44.S219.p_METTL3 Q86U44_S219s _1_1_219_219 Q86U44 Q86U44|B4DTN4|F5H6D8 N6-adenosine-methyltransferase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29144.29144.3 25.2 20.27 13.876 4 1 1 0 912.801 2656.4194 S219s TMT10 216 (K) HAAsDVDLEIESLLNQQSTK (E) HAAS(0.99)DVDLEIES(0.0)LLNQQS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S METTL3 65214.5 2 4 1904.1 108.18 HUMAN 1 -10.0457 0.3414 KSRKMLPTPIGTNSG-p Q96RY5;T1181-p KSRKMLPTPIGTNSG 0.156281344285149 0.235718493770492 -0.551333333333333 -0.268 16.1803270887666 8.26384179172891 -0.551333333333333 -0.268 0.0240972393356193 0.149147445973056 -3.10289196962858 -1.68035059201096 Q96RY5 CRAMP1 Q96RY5.T1181.p_CRAMP1 Q96RY5_S1175sT1181t_2_2_1175_1181 Q96RY5 Q96RY5 Protein cramped-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20335.20335.4 7.22 3.86 1.594 8 2 2 0 877.1808 3327.8459 S1175s M1178m T1181t N1186n N1200n TMT10 1175 (K) sRKmLPtPIGTnSGTSLLGPSLLDGnSR (D) S(0.99)RKM(1.0)LPT(0.99)PIGT(0.0)N(1.0)S(0.0)GT(0.0)S(0.0)LLGPS(0.0)LLDGN(1.0)S(0.0)R K:TMT10,s:Phosphorylated S,m:Oxidized methionine,t:Phosphorylated T,n:Deamidated CRAMP1 135914.1 2 14 647.1 254.68 HUMAN 1 -16.1803 -8.2638 KSRKRSYSPDGKESP-p A8MXP9;S598-p KSRKRSYSPDGKESP 0.372999967794591 0.468293932731722 0.138333333333333 -0.0863333333333333 7.94483385981941 4.39212440579077 0.138333333333333 -0.0863333333333332 0.160515366238121 0.363737066066206 1.62558926956216 -0.991200666062366 A8MXP9 NotFound A8MXP9.S598.p_NotFound A8MXP9_S598s _1_1_598_598 A8MXP9 A8MXP9|P43243|D6REM6|P43243-2|B3KM87 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7857.8067.3 16.5 12.15 2.163 5 1 1 0 841.1159 2441.3694 S598s TMT10 596 (R) SYsPDGKESPSDKK (S) S(0.0)Y(0.0)S(0.99)PDGKES(0.0)PS(0.0)DKK K:TMT10,s:Phosphorylated S MATR3 100478.9 36 23 92.1 615.57 HUMAN 1 7.9448 -4.3921 KSRNEVVTPEKVCKN-p Q99728;T299-p KSRNEVVTPEKVCKN 0.547688375974905 0.00267960937510165 -0.0826666666666667 -0.817666666666667 4.82690677156781 39.0757359906308 -0.0826666666666667 -0.817666666666667 0.329085936305614 0.000123716151275128 -1.07224028729027 -9.72331142165035 Q99728 BARD1 Q99728.T299.p_BARD1 Q99728_T299t _1_1_299_299 Q99728 Q99728|Q99728-2|Q99728-3 BRCA1-associated RING domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7127.7127.3 10.93 7.54 6.38 2 1 1 0 566.3066 1616.9372 T299t TMT10 293 (K) SRNEVVtPEK (V) S(0.0)RNEVVT(0.99)PEK K:TMT10,t:Phosphorylated T BARD1 88129.6 5 1 1495.1 136.58 HUMAN 1 -4.8269 -39.0757 KSRPKFQSPQIQATI-p A0A087WYN9;S192-p KSRPKFQSPQIQATI 0.314368771925545 0.0206172771408466 -0.140333333333333 -1.00933333333333 9.40301405796895 23.0668551121693 -0.140333333333333 -1.00933333333333 0.114735706497959 0.00493531058779598 -1.87815244777945 -4.5651176023773 A0A087WYN9 NotFound A0A087WYN9.S192.p_NotFound A0A087WYN9_S192s _1_1_192_192 A0A087WYN9 A0A087WYN9 ATP-dependent RNA helicase DHX29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25100.25100.3 17.85 16.83 1.481 3 1 1 0 806.7795 2338.3535 S192s TMT10 190 (K) FQsPQIQATISPPLQPK (T) FQS(0.99)PQIQAT(0.0)IS(0.0)PPLQPK K:TMT10,s:Phosphorylated S DHX29 156372.9 1 4 2368.1 86.39 HUMAN 1 -9.403 -23.0669 KSRRLQDSFASETNL-p Q92621;S1939-p KSRRLQDSFASETNL 0.788809289186359 0.602270529756216 0.0496666666666667 0.05 1.98620776205428 2.98613155896731 0.0496666666666667 0.0500000000000001 0.632964311445978 0.502790246240364 0.50574547960904 0.717493616258024 Q92621 NUP205 Q92621.S1939.p_NUP205 Q92621_S1939s _1_1_1939_1939 Q92621 Q92621 Nuclear pore complex protein Nup205 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18391.18391.3 19.15 19.15 3.279 3 1 1 0 703.3389 2028.0348 S1939s TMT10 1935 (R) RLQDsFASETNLDFR (S) RLQDS(0.99)FAS(0.0)ET(0.0)NLDFR s:Phosphorylated S NUP205 230313.6 4 5 2077.1 98.86 HUMAN 1 1.9862 2.9861 KSRVNRLSVLGAITS-p B7Z7P8;S56-p KSRVNRLSVLGAITS 0.271634421514974 0.818147012376999 -0.165333333333333 -0.0303333333333333 10.7273862880212 1.21962387683578 -0.165333333333333 -0.0303333333333333 0.0845787711950912 0.755157625681862 -2.10841537045477 -0.32806300340861 B7Z7P8 ETF1 B7Z7P8.S56.p_ETF1 B7Z7P8_S56s _1_1_56_56 B7Z7P8 P62495|B7Z7P8|P62495-2|D6RCB3 Eukaryotic peptide chain release factor subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20688.20688.3 12.78 12.78 6.656 3 1 1 0 607.6646 1741.0079 S56s Hydrogen 52 (R) VNRLsVLGAITSVQQR (L) VNRLS(0.99)VLGAIT(0.0)S(0.0)VQQR s:Phosphorylated S ETF1 47760.5 2 1 4209.1 35.37 HUMAN 1 -10.7274 -1.2196 KSSDRRNSLEGYSRS-p Q8NDT2;S562-p KSSDRRNSLEGYSRS 0.239911948391928 0.0126156727061657 -0.178 -0.460333333333333 11.8497895627496 26.481786210792 -0.178 -0.460333333333333 0.0653162200833974 0.00224812978183868 -2.30571947193875 -5.42182951035014 Q8NDT2 RBM15B Q8NDT2.S562.p_RBM15B Q8NDT2_S562s _1_1_562_562 Q8NDT2 Q8NDT2|Q8NDT2-2 Putative RNA-binding protein 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4014.4014.2 14.07 6.78 2.841 3 1 1 0 581.2566 1081.5385 S562s Hydrogen 560 (R) RNsLEGYSR (S) RNS(0.99)LEGY(0.0)S(0.0)R s:Phosphorylated S RBM15B 97489 5 13 199.1 454.11 HUMAN 1 -11.8498 -26.4818 KSSERPLSPKAVKGF-p Q15052;S225-p KSSERPLSPKAVKGF 0.875177773892579 0.0442547685989657 0.036 0.300666666666667 1.13434701062805 18.1308914769743 0.036 0.300666666666667 0.770132229930433 0.0153783893545867 0.30724656400126 3.48592374386869 Q15052 ARHGEF6 Q15052.S225.p_ARHGEF6 Q15052_S225s _1_1_225_225 Q15052 Q15052|Q15052-2 Rho guanine nucleotide exchange factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6934.6934.3 8.64 8.64 5.554 3 1 1 0 513.6167 1458.868 S225s TMT10 219 (K) SSERPLsPK (A) S(0.0)S(0.0)ERPLS(0.99)PK K:TMT10,s:Phosphorylated S ARHGEF6 88752.5 2 19 434.2 313.68 HUMAN 1 1.1343 18.1309 KSSESSMSETESDSK-p Q5BKY9;S148-p KSSESSMSETESDSK 0.246863210495205 0.196057108702102 0.390666666666667 -0.132333333333333 11.6184858583363 9.30701540896927 0.390666666666667 -0.132333333333333 0.0688892432695727 0.117300120728372 2.26484161684262 -1.86082820132678 Q5BKY9 FAM133B Q5BKY9.S148.p_FAM133B Q5BKY9_S148s _1_1_148_148 Q5BKY9 Q5BKY9 Protein FAM133B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11270.11270.4 11.51 11.51 1.158 9 1 1 0 765.3877 2978.5646 S148s TMT10 142 (K) SSESSMsETESDSKDSLKK (K) S(0.0)S(0.0)ES(0.0)S(0.0)MS(0.99)ET(0.0)ES(0.0)DS(0.0)KDS(0.0)LKK K:TMT10,s:Phosphorylated S FAM133B 28384.5 2 2 2537.1 79.38 HUMAN 1 11.6185 -9.307 KSSFLCSSPELIALS-p Q4KWH8;S1255-p KSSFLCSSPELIALS 0.958872083562512 0.00356137322963082 0.00799999999999999 -0.729 0.353420645978356 36.4882785084934 0.00799999999999999 -0.729 0.921845065688593 0.000224477154811014 0.102772159505931 -8.65858495111031 Q4KWH8 PLCH1 Q4KWH8.S1255.p_PLCH1 Q4KWH8_S1255s _1_1_1255_1255 Q4KWH8 Q4KWH8|Q4KWH8-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28570.28570.3 14.89 14.89 1.105 9 1 1 0 894.7844 2602.3686 S1255s TMT10 1249 (K) SSFLCSsPELIALSSSETTK (H) S(0.0)S(0.0)FLCS(0.0)S(0.99)PELIALS(0.0)S(0.0)S(0.0)ET(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PLCH1 191330.6 3 11 201.1 451.38 HUMAN 1 0.3534 -36.4883 KSSLSNNSLKSSKNS-p Q9ULJ7;S1183-p KSSLSNNSLKSSKNS 0.411382195733206 0.700501086762947 -0.152333333333333 -0.0403333333333333 7.11912861103329 2.12611536145781 -0.152333333333333 -0.0403333333333333 0.194127534517596 0.612898366478181 -1.48185035964377 -0.536489768403299 Q9ULJ7 ANKRD50 Q9ULJ7.S1183.p_ANKRD50 Q9ULJ7_S1183s _1_1_1183_1183 Q9ULJ7 Q9ULJ7|Q9ULJ7-2 Ankyrin repeat domain-containing protein 50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10381.10609.2 12.09 12.09 3.18 4 1 1 0 744.3964 1407.8208 S1183s TMT10 1177 (K) SSLSNNsLK (S) S(0.0)S(0.0)LS(0.0)NNS(0.99)LK K:TMT10,s:Phosphorylated S ANKRD50 157796.3 2 5 1875.1 109.69 HUMAN 1 -7.1191 -2.1261 KSSPAGNSPAPL___-p B4DSP0;S397-p KSSPAGNSPAPL___ 0.710149878084812 0.881647243312261 -0.0503333333333333 -0.0243333333333333 2.79556996634384 0.769159094470926 -0.0503333333333333 -0.0243333333333334 0.525343064771629 0.837691464982406 -0.678575328942775 -0.214907457058959 B4DSP0 PEG10 B4DSP0.S397.p_PEG10 B4DSP0_S397s _1_1_397_397 B4DSP0 B4DSP0|A0A087WZG9|Q86TG7-2 HCG1642748, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13630.13630.2 9.88 9.88 4.648 3 1 1 0 653.8154 1226.6578 S397s TMT10 391 (K) SSPAGNsPAPL (-) S(0.0)S(0.0)PAGNS(0.99)PAPL s:Phosphorylated S PEG10 45586.7 1 5 3251.1 55.84 HUMAN 1 -2.7956 -0.7692 KSSPSTGSLDSGNES-p Q15057;S384-p KSSPSTGSLDSGNES 0.543226365191182 0.704672190900183 -0.0943333333333333 0.044 4.89411378015123 2.08836755530192 -0.0943333333333333 0.044 0.324032537658771 0.618248746454603 -1.08461770421493 0.52822159941122 Q15057 ACAP2 Q15057.S384.p_ACAP2 Q15057_S384s _1_1_384_384 Q15057 Q15057|A0A087X1H5 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8301.8301.3 13.04 13.04 1.5 7 1 1 0 664.3184 1910.9707 S384s TMT10 378 (K) SSPSTGsLDSGNESK (E) S(0.0)S(0.0)PS(0.0)T(0.0)GS(0.99)LDS(0.0)GNES(0.0)K K:TMT10,s:Phosphorylated S ACAP2 88997 16 4 629.1 257.13 HUMAN 1 -4.8941 2.0884 KSSQPLASKQEKDGT-p P17096;S14-p KSSQPLASKQEKDGT 0.721173548608574 0.55962713215966 -0.0663333333333333 0.102666666666667 2.68274558343947 3.3979986432836 -0.0663333333333333 0.102666666666667 0.539169654953822 0.457298877839422 -0.655203340015852 0.800032150039496 P17096 HMGA1 P17096.S14.p_HMGA1 P17096_S14s _1_1_14_14 P17096 P17096-3|P17096-2 High mobility group protein HMG-I/HMG-Y HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8607.8607.3 13.03 13.03 3.756 3 1 1 0 657.3685 1890.1263 S14s TMT10 8 (K) SSQPLAsKQEK (D) S(0.0)S(0.0)QPLAS(0.99)KQEK K:TMT10,s:Phosphorylated S HMGA1 11675.8 1 2 1152.1 172.09 HUMAN 1 -2.6827 3.398 KSSREFGSVDYWEKF-p Q8N6R0;S13-p KSSREFGSVDYWEKF 0.833410479125805 0.030879695719171 -0.0453333333333333 0.362 1.52584703072941 20.4141434584939 -0.0453333333333333 0.362 0.703744958925597 0.00909045568781078 -0.401034453613094 3.96459084198102 Q8N6R0 METTL13 Q8N6R0.S13.p_METTL13 Q8N6R0_S13s _1_1_13_13 Q8N6R0 Q8N6R0|Q8N6R0-4|Q8N6R0-1 Methyltransferase-like protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23397.23397.3 10.99 10.99 2.532 2 1 1 0 599.9548 1717.8838 S13s TMT10 10 (R) EFGsVDYWEK (F) EFGS(0.99)VDY(0.0)WEK K:TMT10,s:Phosphorylated S METTL13 79622.3 1 1 3629.1 46.6 HUMAN 1 -1.5258 20.4141 KSSSRQLSESFKSKE-p Q08945;S657-p KSSSRQLSESFKSKE 0.59660677105629 0.753882358548044 -0.159 -0.0326666666666667 4.1412607985587 1.69521573350835 -0.159 -0.0326666666666667 0.385366465841661 0.676828170999915 -0.944037231807208 -0.440146683477928 Q08945 SSRP1 Q08945.S657.p_SSRP1 Q08945_S657s _1_1_657_657 Q08945 Q08945 FACT complex subunit SSRP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15260.15260.2 9.48 2.22 2.254 2 1 1 0 688.8652 1296.7564 S657s TMT10 655 (R) QLsESFK (S) QLS(0.99)ES(0.0)FK K:TMT10,s:Phosphorylated S SSRP1 81415.7 6 4 1270.1 159.97 HUMAN 1 -4.1413 -1.6952 KSSTRAPSPTKRKDR-p Q15287;S27-p KSSTRAPSPTKRKDR 0.328843621955026 0.297632568656203 0.186 0.193333333333333 9.03030474917828 6.94784325004906 0.186 0.193333333333333 0.125017130125497 0.201936895358672 1.81360899987274 1.45148230754803 Q15287 RNPS1 Q15287.S27.p_RNPS1 Q15287_S27s _1_1_27_27 Q15287 Q15287|H3BNU7 RNA-binding protein with serine-rich domain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4388.4388.3 11.59 8.68 2.46 5 1 1 0 523.9508 1489.8739 S27s TMT10 21 (K) SSTRAPsPTK (R) S(0.0)S(0.0)T(0.0)RAPS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S RNPS1 34207.7 15 2 2314.1 88.32 HUMAN 1 9.0303 6.9478 KSTAKNFSPSTNSVK-p D4PHA4;S280-p KSTAKNFSPSTNSVK 0.654531796805768 0.00194036235975101 -0.0646666666666667 -0.832666666666667 3.44986602806868 42.4860181849405 -0.0646666666666667 -0.832666666666667 0.451869883522158 5.64154662178594e-05 -0.810393410121184 -11.3080920822091 D4PHA4 GPBP1 D4PHA4.S280.p_GPBP1 D4PHA4_S280s _1_1_280_280 D4PHA4 Q86WP2-2|Q86WP2-3|Q86WP2-4|D4PHA4 GC-rich promoter binding protein 1, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12999.12999.2 11.8 7.58 1.424 4 1 1 0 809.9164 1538.8579 S280s TMT10 278 (K) NFsPSTNSVK (E) NFS(0.99)PS(0.0)T(0.0)NS(0.0)VK K:TMT10,s:Phosphorylated S GPBP1 55695.9 2 3 1428.1 143.61 HUMAN 1 -3.4499 -42.486 KSTFREESPLRIKMI-p Q9NYF8;S531-p KSTFREESPLRIKMI 0.477468266229797 0.0510027741436716 0.094 0.287 5.90662223844682 17.2590429065253 0.094 0.287 0.256647936120455 0.0187973102424718 1.26791121588764 3.31125957175545 Q9NYF8 BCLAF1 Q9NYF8.S531.p_BCLAF1 Q9NYF8_S531s _1_1_531_531 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|Q9NYF8-4|A0A1W2PQ43|E9PJA7 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13655.14304.4 12.84 7.32 3.486 3 1 1 0 501.0288 1921.1271 S531s TMT10 525 (K) STFREEsPLRIK (M) S(0.0)T(0.0)FREES(0.99)PLRIK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 28 28 10.1 1293.04 HUMAN 1 5.9066 17.259 KSTGKGDSCDSSEDK-p P46100;S1073-p KSTGKGDSCDSSEDK 0.049158581421578 0.0100650858802549 0.590333333333333 0.429666666666667 28.9679888394806 28.0620769341081 0.590333333333333 0.429666666666667 0.00126823903467786 0.00156240027452757 6.12417426992729 5.85499908601541 P46100 ATRX P46100.S1073.p_ATRX P46100_S1073sS1076s_2_2_1073_1076 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6552.6552.3 7.73 7.73 1.408 5 2 2 0 893.0914 2517.3272 S1073s S1076s TMT10 1067 (K) STGKGDsCDsSEDKK (S) S(0.0)T(0.0)GKGDS(0.99)CDS(0.99)S(0.0)EDKK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ATRX 285034.2 2 53 18.1 1035.36 HUMAN 1 28.968 28.0621 KSTHDLQSPPNKREK-p P49796;S401-p KSTHDLQSPPNKREK 0.373737854391693 0.408606687070549 0.122 -0.129666666666667 7.919367487307 5.17329978763035 0.122 -0.129666666666667 0.161459369143717 0.303857542605337 1.62116984277517 -1.13548712642694 P49796 RGS3 P49796.S401.p_RGS3 P49796_S401s _1_1_401_401 P49796 P49796|P49796-6|P49796-4|P49796-5 Regulator of G-protein signaling 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5098.5098.3 8.06 8.06 8.056 3 1 1 0 640.0047 1838.0285 S401s TMT10 395 (K) STHDLQsPPNKR (E) S(0.0)T(0.0)HDLQS(0.99)PPNKR K:TMT10,s:Phosphorylated S RGS3 134216.1 1 1 1029.1 186.27 HUMAN 1 7.9194 -5.1733 KSTKRTKSINGSLYI-p Q8TCU6;S319-p KSTKRTKSINGSLYI 0.0866557243462627 0.0038569589278956 0.452666666666667 0.789 22.6907444447082 35.6918140152777 0.452666666666667 0.789 0.00538177523055051 0.000269661284234242 4.48169779097961 8.35241380421071 Q8TCU6 PREX1 Q8TCU6.S319.p_PREX1 Q8TCU6_S319s _1_1_319_319 Q8TCU6 Q8TCU6|Q8TCU6-3 Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25931.25931.2 14.66 6.15 3.211 3 1 1 0 739.8828 1398.7943 S319s TMT10 319 (K) sINGSLYIFR (G) S(0.99)INGS(0.0)LY(0.0)IFR s:Phosphorylated S PREX1 188881.6 4 2 379.1 336 HUMAN 1 22.6907 35.6918 KSVNDQPSGNLPFLK-p O75533;S461-p KSVNDQPSGNLPFLK 0.911753399332893 0.91275003344289 0.0213333333333333 0.0223333333333334 0.781938501218566 0.555140412145427 0.0213333333333333 0.0223333333333334 0.835230124703378 0.880006659651731 0.218248522593871 0.158223575742351 O75533 SF3B1 O75533.S461.p_SF3B1 O75533_S461s_1_1_461_461 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29694.29694.4 8.2 8.2 8.203 3 1 1 0 852.1876 3324.7719 S461s N463n TMT10 455 (K) SVNDQPsGnLPFLKPDDIQYFDK (L) S(0.0)VN(0.0)DQPS(0.99)GN(0.99)LPFLKPDDIQY(0.0)FDK K:TMT10,s:Phosphorylated S,n:Deamidated SF3B1 146569.5 1 29 53.1 735.77 HUMAN 1 0.7819 0.5551 KSVPADLSRPKSTST-p E7EVA0;S2004-p KSVPADLSRPKSTST 0.301887758255495 0.337511825351373 -0.169666666666667 -0.125333333333333 9.7503826206075 6.24894200291368 -0.169666666666667 -0.125333333333333 0.105916040728637 0.23719514730986 -1.93837418718384 -1.32846342245471 E7EVA0 NotFound E7EVA0.S2004.p_NotFound E7EVA0_S2004s _1_1_2004_2004 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2|P27816-4 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10693.10693.3 9.76 4.17 5.166 2 1 1 0 536.6364 1527.9259 S2004s TMT10 1998 (K) SVPADLsRPK (S) S(0.0)VPADLS(0.99)RPK K:TMT10,s:Phosphorylated S MAP4 246695.2 1 36 38.1 865.62 HUMAN 1 -9.7504 -6.2489 KSVREDASPLPHVCC-p Q8NCE0;S215-p KSVREDASPLPHVCC 0.730375351303024 0.075844989681455 -0.0473333333333333 0.232333333333333 2.58846003019017 14.866664392854 -0.0473333333333333 0.232333333333333 0.551003042573395 0.0326087056639524 -0.63550839365395 2.85164061899351 Q8NCE0 TSEN2 Q8NCE0.S215.p_TSEN2 Q8NCE0_S215s _1_1_215_215 Q8NCE0 Q8NCE0|Q8NCE0-2|Q8NCE0-3|Q8NCE0-5 tRNA-splicing endonuclease subunit Sen2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16058.16058.5 18.41 18.41 1.403 2 1 1 0 678.9429 3310.7223 S215s TMT10 209 (K) SVREDAsPLPHVCCCKQDALILQR (G) S(0.0)VREDAS(0.99)PLPHVCCCKQDALILQR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TSEN2 53816.5 5 2 3024.1 62.94 HUMAN 1 -2.5885 14.8667 KSVRPGASYKRQNEG-p F8W0Q9;S196-p KSVRPGASYKRQNEG 0.097468931351843 0.047610388917904 -1.15566666666667 0.400666666666667 21.4199195419846 17.6863652749773 -1.15566666666667 0.400666666666667 0.00721120838646708 0.0170358368602996 -4.19052525585786 3.39634787130098 F8W0Q9 NotFound F8W0Q9.S196.p_NotFound F8W0Q9_S196s _1_1_196_196 F8W0Q9 Q8NEY8|Q8NEY8-3|F8W0Q9|Q8NEY8-2|Q8NEY8-8|B7Z8L1|Q8NEY8-6|Q8NEY8-5 Periphilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.6943.6943.3 9.57 9.57 3.179 3 1 1 0 501.6092 1422.8469 S196s TMT10 190 (K) SVRPGAsYK (R) S(0.0)VRPGAS(0.99)Y(0.0)K K:TMT10,s:Phosphorylated S PPHLN1 44796.3 1 12 663.1 251.09 HUMAN 1 -21.4199 17.6864 KSVSPKLSPVISPRN-p Q08499-6;S55-p KSVSPKLSPVISPRN 0.583840571093275 0.751016269065957 -0.0783333333333333 0.0373333333333334 4.30081894979399 1.71880979678269 -0.0783333333333334 0.0373333333333334 0.371465175245279 0.673161113785117 -0.974212150140233 0.445539815603714 Q08499 PDE4D Q08499.6.S55.p_PDE4D Q08499-6_S55sS59s_2_2_55_59 Q08499-6 Q08499-6|Q08499-12|Q08499-7 Isoform 5 of cAMP-specific 3',5'-cyclic phosphodiesterase 4D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18505.18505.3 8.7 8.7 3.793 4 2 2 0 662.359 1825.1311 S55s S59s TMT10 49 (K) SVSPKLsPVIsPR (N) S(0.0)VS(0.0)PKLS(0.99)PVIS(0.99)PR K:TMT10,s:Phosphorylated S PDE4D 84996.7 4 5 2699.1 73.54 HUMAN 1 -4.3008 1.7188 KSVTCTYSPALNKMF-p P04637;S127-p KSVTCTYSPALNKMF 0.535600087803484 0.0280368765939775 -0.113333333333333 -0.375333333333333 5.01970419823716 21.0338071399111 -0.113333333333333 -0.375333333333333 0.314796271728836 0.00788168885065206 -1.10766779045189 -4.10032087412934 P04637 TP53 P04637.S127.p_TP53 P04637_S127s _1_1_127_127 P04637 A0A0U1RQC9|P04637|P04637-4|P04637-3|J3KP33|P04637-2 Cellular tumor antigen p53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15309.15309.3 9.85 9.85 1.831 5 1 1 0 626.9861 1798.9773 S127s TMT10 121 (K) SVTCTYsPALNK (M) S(0.0)VT(0.0)CT(0.0)Y(0.0)S(0.99)PALNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TP53 44223 1 5 1419.1 144.35 HUMAN 1 -5.0197 -21.0338 KSWKPCLSPKSDCEN-p Q8NF99;S182-p KSWKPCLSPKSDCEN 0.853078520589323 0.00319836444136788 -0.0363333333333333 0.622333333333333 1.33683724703115 37.4352406983055 -0.0363333333333334 0.622333333333333 0.735048973279091 0.000180499469643966 -0.356359598249316 9.03549312619756 Q8NF99 ZNF397 Q8NF99.S182.p_ZNF397 Q8NF99_S182s _1_1_182_182 Q8NF99 Q8NF99|Q8NF99-2 Zinc finger protein 397 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17244.17244.3 7.8 7.8 7.796 2 1 1 0 624.0146 1790.0602 S182s TMT10 176 (K) SWKPCLsPK (S) S(0.0)WKPCLS(0.99)PK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF397 62678.3 2 104 240.15 415.72 HUMAN 1 -1.3368 37.4352 KSWSTATSPLGGERP-p Q9UPQ0-4;S303-p KSWSTATSPLGGERP 0.211499993225506 0.0447171083705694 -0.203666666666667 -0.264333333333333 13.0235631284206 18.0623386574575 -0.203666666666667 -0.264333333333333 0.0498475350211911 0.0156230612083028 -2.5153137404889 -3.47203753572996 Q9UPQ0 LIMCH1 Q9UPQ0.4.S303.p_LIMCH1 Q9UPQ0-4_S303s _1_1_303_303 Q9UPQ0-4 Q9UPQ0|Q9UPQ0-4|Q9UPQ0-2|E7EPK0|Q9UPQ0-9|Q6NVB9|D6RJ93 Isoform 4 of LIM and calponin homology domains-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17544.17544.2 7.01 7.01 7.012 5 1 1 0 1029.5073 1978.0344 S303s TMT10 297 (K) SWSTATsPLGGERPFR (S) S(0.0)WS(0.0)T(0.0)AT(0.0)S(0.99)PLGGERPFR s:Phosphorylated S LIMCH1 121463.5 2 8 679.1 246.52 HUMAN 1 -13.0236 -18.0623 KSYKNSGTIRVKICR-p B0QZ18;T265-p KSYKNSGTIRVKICR 0.689385882760621 0.0563256695497726 -0.0743333333333333 0.697666666666667 3.03000335465673 16.6473353866856 -0.0743333333333334 0.697666666666667 0.497736700507918 0.0216404586659245 -0.726499756678738 3.19112477666461 B0QZ18 CPNE1 B0QZ18.T265.p_CPNE1 B0QZ18_T265t _1_1_265_265 B0QZ18 B0QZ18|Q99829|A6PVH9|E7ENH5 Copine-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7326.7326.3 7.57 7.57 2.433 2 1 1 0 471.6044 1332.8364 T265t TMT10 262 (K) NSGtIRVK (I) NS(0.0)GT(0.99)IRVK K:TMT10,t:Phosphorylated T CPNE1 60344.2 1 2 5539.1 18.35 HUMAN 1 -3.03 16.6473 KSYKTVDSPKRRSRS-p Q9NYV4-2;S215-p KSYKTVDSPKRRSRS 0.129322173526981 0.827639220135631 0.522 -0.0453333333333333 18.4033440860797 1.15018434994289 0.522 -0.0453333333333333 0.0144432720433762 0.767328916982879 3.54435925691862 -0.311106319572169 Q9NYV4 CDK12 Q9NYV4.2.S215.p_CDK12 Q9NYV4-2_S215s _1_1_215_215 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.3553.3553.2 7.72 3 3.004 2 1 1 0 748.9199 1416.8687 S215s TMT10 212 (K) TVDsPKRR (S) T(0.0)VDS(0.99)PKRR K:TMT10,s:Phosphorylated S CDK12 163853.1 2 5 59.1 708.76 HUMAN 1 18.4033 -1.1502 KSYLEGSSDNQLKDS-p Q9UHI6;S678-p KSYLEGSSDNQLKDS 0.486350322519858 0.182157822251302 -0.177666666666667 0.167 5.76683359341088 9.72858903193261 -0.177666666666667 0.167 0.265043184314109 0.106448880105405 -1.24291334259349 1.9338350644037 Q9UHI6 DDX20 Q9UHI6.S678.p_DDX20 Q9UHI6_S677sS678s_2_2_677_678 Q9UHI6 Q9UHI6|E9PJ60 Probable ATP-dependent RNA helicase DDX20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16879.16879.4 11.63 11.63 4.431 7 2 2 0 765.8444 2900.4162 S677s S678s TMT10 672 (K) SYLEGssDNQLKDSESTPVDDR (I) S(0.0)Y(0.0)LEGS(0.99)S(0.99)DNQLKDS(0.0)ES(0.0)T(0.0)PVDDR K:TMT10,s:Phosphorylated S DDX20 93037.6 6 14 610.1 261.86 HUMAN 1 -5.7668 9.7286 KSYQNSPSSDDGIRP-p Q15648;S1481-p KSYQNSPSSDDGIRP 0.57602742215752 0.0456921667392721 -0.08 0.262333333333333 4.40652412836324 17.9322896585732 -0.08 0.262333333333333 0.362533035295945 0.0160979670506861 -0.994082239500397 3.4457673904407 Q15648 MED1 Q15648.S1481.p_MED1 Q15648_S1479sS1481sS1482s_3_3_1479_1482 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20770.20770.3 9.9 9.9 9.901 8 3 3 0 1057.1274 2928.4627 N1478n S1479s S1481s S1482s TMT10 1475 (K) SYQnsPssDDGIRPLPEYSTEK (H) S(0.0)Y(0.0)QN(1.0)S(0.99)PS(0.99)S(0.99)DDGIRPLPEY(0.0)S(0.0)T(0.0)EK K:TMT10,n:Deamidated,s:Phosphorylated S MED1 169445 5 42 115.1 566.87 HUMAN 1 -4.4065 17.9323 KSYSGLRSPTRCVSE-p Q08050-3;S560-p KSYSGLRSPTRCVSE 0.638214795270655 0.000952253650599092 0.086 -1.466 3.63901963107425 53.6940533079122 0.086 -1.466 0.432611476987307 4.27164024176447e-06 0.847466717815979 -18.4044507928403 Q08050 FOXM1 Q08050.3.S560.p_FOXM1 Q08050-3_S560s _1_1_560_560 Q08050-3 Q08050-3|Q08050-2|A0A0D9SFF0 Isoform 4 of Forkhead box protein M1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5690.5690.3 12.59 6.51 1.469 5 1 1 0 478.2433 1352.7484 S560s TMT10 554 (K) SYSGLRsPTR (C) S(0.0)Y(0.0)S(0.0)GLRS(0.99)PT(0.0)R s:Phosphorylated S FOXM1 89107.7 2 1 1076.1 180.52 HUMAN 1 3.639 -53.6941 KSYSVEKSPQDEGLH-p Q7RTP6;S1371-p KSYSVEKSPQDEGLH 0.425033318045053 0.00260993383014684 -0.171333333333333 -0.847666666666667 6.84605914973644 39.3431672980739 -0.171333333333333 -0.847666666666667 0.206725516188844 0.000116327734491126 -1.43403885472083 -9.83981386168722 Q7RTP6 MICAL3 Q7RTP6.S1371.p_MICAL3 Q7RTP6_S1371s _1_1_1371_1371 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23527.23527.5 22.43 22.43 1.132 5 1 1 0 713.2066 3482.044 S1371s TMT10 1365 (K) SYSVEKsPQDEGLHLLKPLSIPK (R) S(0.0)Y(0.0)S(0.0)VEKS(0.99)PQDEGLHLLKPLS(0.0)IPK K:TMT10,s:Phosphorylated S MICAL3 225431.9 2 13 190.1 466.81 HUMAN 1 -6.8461 -39.3432 KSYYKPDSPEYKAAC-p Q86U86;S131-p KSYYKPDSPEYKAAC 0.718243489759715 0.0126474673176986 -0.0503333333333333 0.591666666666667 2.71213155212624 26.4617361706069 -0.0503333333333334 0.598342830231072 0.535533748743524 0.0022585327004971 -0.661310896626389 5.41649196038271 Q86U86 PBRM1 Q86U86.S131.p_PBRM1 Q86U86_S131s _1_1_131_131 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-9|Q86U86-3|Q86U86-7|Q86U86-4|Q86U86-5 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12812.12812.3 10.22 10.22 2.972 5 1 1 0 715.3695 2064.1257 S131s TMT10 125 (K) SYYKPDsPEYK (A) S(0.0)Y(0.0)Y(0.0)KPDS(0.99)PEY(0.0)K K:TMT10,s:Phosphorylated S PBRM1 194199.5 3 3 194.1 462.54 HUMAN 1 -2.7121 26.4617 KTAALEKSKLNLAQF-p Q9BPX3;S1002-p KTAALEKSKLNLAQF 0.515467060998099 0.00309831083212838 0.137666666666667 -0.672 5.31519865949158 37.6958538898854 0.137666666666667 -0.672 0.294089916500705 0.00016998657009885 1.16151899824125 -9.141753508247 Q9BPX3 NCAPG Q9BPX3.S1002.p_NCAPG Q9BPX3_S1002s _1_1_1002_1002 Q9BPX3 Q9BPX3 Condensin complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33422.33422.3 12.24 12.24 5.067 2 1 1 0 710.7131 2050.1585 S1002s TMT10 1002 (K) sKLNLAQFLNEDLS (-) S(0.99)KLNLAQFLNEDLS(0.0) K:TMT10,s:Phosphorylated S NCAPG 115416.1 1 6 1123.1 174.85 HUMAN 1 5.3152 -37.6959 KTAENATSGETLEEN-p Q9UQ80;S383-p KTAENATSGETLEEN 0.362826680057782 0.58302252715417 0.165 -0.0966666666666667 8.18061229844796 3.16328248210939 0.165 -0.0966666666666667 0.152033316751908 0.482693834749888 1.66647828679444 -0.753277024387836 Q9UQ80 PA2G4 Q9UQ80.S383.p_PA2G4 Q9UQ80_S383s _1_1_383_383 Q9UQ80 Q9UQ80|Q9UQ80-2 Proliferation-associated protein 2G4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.9754.9754.2 8.91 8.91 1.307 4 1 1 0 1073.9479 2066.9199 S383s TMT10 377 (K) TAENATsGETLEENEAGD (-) T(0.0)AENAT(0.0)S(0.99)GET(0.0)LEENEAGD s:Phosphorylated S PA2G4 44128.4 4 6 1457.1 140.36 HUMAN 1 8.1806 -3.1633 KTAKRKGSAVDASVQ-p O95613;S44-p KTAKRKGSAVDASVQ 0.116602871314905 0.172330268584419 -0.309 0.258 19.4295493035645 10.0392894418702 -0.309 0.258 0.0114036812504942 0.0990994070206627 -3.75758091557511 1.98772983636787 O95613 PCNT O95613.S44.p_PCNT O95613_S44s _1_1_44_44 O95613 O95613 Pericentrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10042.10042.4 14.36 14.36 2.338 4 1 1 0 664.614 2575.4658 S44s TMT10 41 (K) RKGsAVDASVQEESPVTK (E) RKGS(0.99)AVDAS(0.0)VQEES(0.0)PVT(0.0)K K:TMT10,s:Phosphorylated S PCNT 380826.2 1 1 222.1 428 HUMAN 1 -19.4295 10.0393 KTANVPQTVPMRLRK-p P46937-9;T83-p KTANVPQTVPMRLRK 0.148266672319898 0.117044561364498 0.301666666666667 0.413333333333333 16.7499685435957 12.2848785627267 0.301666666666667 0.413333333333333 0.0211350434811462 0.0590897487998972 3.2135498541175 2.38174666925362 P46937 YAP1 P46937.9.T83.p_YAP1 P46937-9_T83t _1_1_83_83 P46937-9 P46937-9|P46937-8|P46937-2|P46937-7 Isoform 9 of Transcriptional coactivator YAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12141.12141.2 10.94 10.94 8.018 2 1 1 0 761.8867 1442.7987 T83t TMT10 77 (K) TANVPQtVPMR (L) T(0.0)ANVPQT(0.99)VPMR t:Phosphorylated T YAP1 54998.2 2 3 436.1 313.01 HUMAN 1 16.75 12.2849 KTASKLCSALTLSGL-p Q6FI81;S117-p KTASKLCSALTLSGL 0.127031752844893 0.899414628938155 -0.344333333333333 -0.0193333333333333 18.5791379388738 0.645006705631497 -0.344333333333333 -0.0193333333333333 0.0138703112294024 0.861984247776303 -3.58043473504808 -0.182280206943942 Q6FI81 CIAPIN1 Q6FI81.S117.p_CIAPIN1 Q6FI81_S117s _1_1_117_117 Q6FI81 Q6FI81|Q6FI81-3|H3BT65|H3BV90|H3BUG4 Anamorsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.33763.33763.3 12.41 9.97 1.232 3 1 1 0 676.7117 1948.1553 S117s TMT10 115 (K) LCsALTLSGLVEVK (E) LCS(0.99)ALT(0.0)LS(0.0)GLVEVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CIAPIN1 34152.3 1 1 2232.1 92.49 HUMAN 1 -18.5791 -0.645 KTASPEDSDMPDHDL-p O95071;S1312-p KTASPEDSDMPDHDL 0.197771061122644 0.388708951697392 0.249666666666667 -0.136333333333333 13.7185327919732 5.45549138512781 0.249666666666667 -0.136333333333333 0.0424763040436925 0.284741560937929 2.64138448551794 -1.18665442530581 O95071 UBR5 O95071.S1312.p_UBR5 O95071_S1312s _1_1_1312_1312 O95071 O95071|O95071-2 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20989.20989.5 18.78 18.78 1.124 3 1 1 0 721.5532 3523.7892 S1312s TMT10 1305 (R) KTASPEDsDMPDHDLEPPRFAQLALER (V) KT(0.0)AS(0.0)PEDS(0.99)DMPDHDLEPPRFAQLALER K:TMT10,s:Phosphorylated S UBR5 312542 3 15 80.1 636.57 HUMAN 1 13.7185 -5.4555 KTAVSCLSQNDWKLD-p Q96GG9;S31-p KTAVSCLSQNDWKLD 0.97076436181379 0.0275163694325009 0.006 0.311 0.253892060580009 21.1627071189304 0.00556885832167244 0.311 0.943215206739015 0.0076511953079448 0.0745973653942295 4.12888940929304 Q96GG9 DCUN1D1 Q96GG9.S31.p_DCUN1D1 Q96GG9_S31s _1_1_31_31 Q96GG9 Q96GG9|C9JVE2 DCN1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.34689.34689.4 14.51 14.51 2.377 5 1 1 0 996.4964 3902.9787 S31s TMT10 25 (K) TAVSCLsQNDWKLDVATDNFFQNPELYIR (E) T(0.0)AVS(0.0)CLS(0.99)QNDWKLDVAT(0.0)DNFFQNPELY(0.0)IR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DCUN1D1 30352 1 2 4847.1 25.93 HUMAN 1 0.2539 21.1627 KTCFKLGSALLIRDT-p Q14993;S81-p KTCFKLGSALLIRDT 0.686733639129555 0.758722342730293 0.088 -0.0456666666666666 3.06307085156997 1.65576226816704 0.088 -0.0456666666666666 0.493961288531686 0.683004827316949 0.733193841756388 -0.431095571866611 Q14993 COL19A1 Q14993.S81.p_COL19A1 Q14993_S81s _1_1_81_81 Q14993 Q14993 Collagen alpha-1(XIX) chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23592.23592.2 11.26 1.26 99 1 1 1 0 576.3407 1071.7087 S81s TMT10 79 (K) LGsALLIR (D) LGS(1.0)ALLIR s:Phosphorylated S COL19A1 116017.4 3 1 5415.1 19.57 HUMAN 1 3.0631 -1.6558 KTDEEISS_______-p P61764;S594-p KTDEEISS_______ 0.957810192524261 0.295232287727978 0.009 -0.101 0.363711016562379 6.99427480445333 0.009 -0.101 0.919663389848243 0.199789435387559 0.105653511186211 -1.45960808536058 P61764 STXBP1 P61764.S594.p_STXBP1 P61764_S594s _1_1_594_594 P61764 P61764|A0A0D9SG72 Syntaxin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11872.11872.2 12.51 11.22 1.159 3 1 1 0 837.4232 1593.8736 S594s TMT10 585 (K) LNKTDEEISs (-) LNKT(0.0)DEEIS(0.0)S(0.99) K:TMT10,s:Phosphorylated S STXBP1 67966.9 2 1 5152.1 22.36 HUMAN 1 0.3637 -6.9943 KTDYMVGSYGPRAEE-p J3QQX2;S148-p KTDYMVGSYGPRAEE 0.296574645461041 0.0468082378390999 -0.259333333333333 -0.236333333333333 9.94154072598174 17.7870133854062 -0.259333333333333 -0.236333333333333 0.101355174898948 0.0166455696173419 -1.97155584011954 -3.41653308601163 J3QQX2 ARHGDIA J3QQX2.S148.p_ARHGDIA J3QQX2_S148s _1_1_148_148 J3QQX2 J3QQX2|P52565 Rho GDP-dissociation inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18020.18020.3 11.01 11.01 4.517 4 1 1 0 714.0216 2060.0887 S148s TMT10 139 (K) IDKTDYMVGsYGPR (A) IDKT(0.0)DY(0.0)MVGS(0.99)Y(0.0)GPR K:TMT10,s:Phosphorylated S ARHGDIA 25945 1 4 3480.1 49.97 HUMAN 1 -9.9415 -17.787 KTEAPQASPLAKPLQ-p Q8IY33;S494-p KTEAPQASPLAKPLQ 0.168851864469139 0.0101402609943232 0.295333333333333 -0.422666666666667 15.4063915996598 28.0053950006887 0.295333333333333 -0.422666666666667 0.0287979013749535 0.0015829255894838 2.95502346619477 -5.83902457088558 Q8IY33 MICALL2 Q8IY33.S494.p_MICALL2 Q8IY33_S494s _1_1_494_494 Q8IY33 Q8IY33 MICAL-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13861.13861.3 13.76 13.76 4.143 5 1 1 0 835.1165 2423.3658 S494s TMT10 488 (K) TEAPQAsPLAKPLQSSSPR (V) T(0.0)EAPQAS(0.99)PLAKPLQS(0.0)S(0.0)S(0.0)PR K:TMT10,s:Phosphorylated S MICALL2 98299.3 1 21 387.1 332.82 HUMAN 1 15.4064 -28.0054 KTEELIESPKLESSE-p Q99590;S608-p KTEELIESPKLESSE 0.644079681211101 0.941332027754432 0.0636666666666667 -0.00766666666666664 3.57297861410687 0.374986999810854 0.0636666666666667 -0.00766666666666664 0.439240258628859 0.917278681171502 0.834570147054651 -0.108794150098479 Q99590 SCAF11 Q99590.S608.p_SCAF11 Q99590_S608s _1_1_608_608 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29327.29327.5 22.15 20.69 3.478 6 1 1 0 795.6278 3894.1203 S608s TMT10 597 (K) DFTLKTEELIEsPKLESSEGEIIQTVDR (Q) DFT(0.0)LKT(0.0)EELIES(0.99)PKLES(0.0)S(0.0)EGEIIQT(0.0)VDR K:TMT10,s:Phosphorylated S SCAF11 166418 5 9 120.1 549.85 HUMAN 1 3.573 -0.375 KTEEPLGSPHPSGTV-p Q9NWS9;S137-p KTEEPLGSPHPSGTV 0.247954412325461 0.017356728506643 0.178 0.587666666666667 11.5685701809931 24.2836570206967 0.178 0.587666666666667 0.0696855900818145 0.0037293599101002 2.25603628124478 4.85876810744554 Q9NWS9 ZNF446 Q9NWS9.S137.p_ZNF446 Q9NWS9_S137s _1_1_137_137 Q9NWS9 Q9NWS9|Q9NWS9-2|A0A0B4J2G2|M0R202|A0A0A0MR84 Zinc finger protein 446 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15308.15308.4 20.94 20.94 4.174 6 1 1 0 1016.755 3984.0351 S137s TMT10 122 (K) QEVLPAAQKTEEPLGsPHPSGTVESPGEGPQDTR (I) QEVLPAAQKT(0.0)EEPLGS(0.99)PHPS(0.0)GT(0.0)VES(0.0)PGEGPQDT(0.0)R K:TMT10,s:Phosphorylated S ZNF446 49754.9 2 1 2353.1 86.88 HUMAN 1 11.5686 24.2837 KTEESPASDEAGEKE-p P05114;S89-p KTEESPASDEAGEKE 0.351941062906821 0.00529828536418586 -0.257 0.593333333333333 8.42208486210764 33.0626155678876 -0.257 0.593333333333333 0.143810803834262 0.000494013074661196 -1.70831387443082 7.40748229358387 P05114 HMGN1 P05114.S89.p_HMGN1 P05114_S89s_1_1_89_89 P05114 A6NEL0|P05114|A6NL93 Non-histone chromosomal protein HMG-14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13032.13238.5 21.69 18.64 3.277 5 1 1 0 926.6543 4548.2883 N78n S89s TMT10 62 (K) QAEVANQETKEDLPAEnGETKTEESPAsDEAGEK (E) QAEVAN(0.0)QET(0.0)KEDLPAEN(0.99)GET(0.0)KT(0.0)EES(0.0)PAS(0.99)DEAGEK K:TMT10,n:Deamidated,s:Phosphorylated S HMGN1 10658.7 7 4 878.1 208.13 HUMAN 1 -8.4221 33.0626 KTENLLGSYFPKKIS-p Q06323;S31-p KTENLLGSYFPKKIS 0.824144348915705 0.122222476547585 0.0383333333333333 0.240666666666667 1.62001294123048 12.0399739932591 0.0383333333333333 0.240666666666667 0.688650244281636 0.0625176436491894 0.422904047294572 2.33825558663273 Q06323 PSME1 Q06323.S31.p_PSME1 Q06323_S31s _1_1_31_31 Q06323 Q06323-2|Q06323-3 Proteasome activator complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31941.31941.5 7.87 6.33 2.002 4 1 1 0 680.5599 3318.8011 S31s TMT10 14 (K) VDVFREDLCTKTENLLGsYFPK (K) VDVFREDLCT(0.0)KT(0.0)ENLLGS(0.99)Y(0.0)FPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PSME1 28893.7 2 1 4755.1 26.99 HUMAN 1 1.62 12.04 KTENRSRSKEKTDGG-p A0A0C4DG89;S120-p KTENRSRSKEKTDGG 0.0866557243462627 0.957832844407715 1.288 0.00833333333333334 22.6835146582858 0.269205898995687 1.288 0.00833333333333335 0.00539074183994935 0.939895153285177 4.48000651004086 0.0789620750368042 A0A0C4DG89 DDX46 A0A0C4DG89.S120.p_DDX46 A0A0C4DG89_S120s _1_1_120_120 A0A0C4DG89 A0A0C4DG89|Q7L014|D6RJA6 Probable ATP-dependent RNA helicase DDX46 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3952.3952.3 12.38 12.38 5.016 4 1 1 0 674.0241 1940.0903 S120s Hydrogen 120 (R) sKEKTDGGESSK (E) S(0.99)KEKT(0.0)DGGES(0.0)S(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S DDX46 117972.6 1 1 985.1 191.96 HUMAN 1 22.6835 0.2692 KTESPNASRGSSLPR-p Q2LD37;S3898-p KTESPNASRGSSLPR 0.148374825932688 0.155558711850649 0.372 0.263 16.7215351398067 10.6261251462127 0.372 0.263 0.0212738692645057 0.0865740003153993 3.2079881514243 2.08982592922118 Q2LD37 KIAA1109 Q2LD37.S3898.p_KIAA1109 Q2LD37_S3898s _1_1_3898_3898 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6461.6461.3 12.98 7.92 1.933 4 1 1 0 581.3127 1661.9587 S3898s TMT10 3889 (K) TLKTESPNAsR (G) T(0.0)LKT(0.0)ES(0.0)PNAS(0.99)R K:TMT10,s:Phosphorylated S KIAA1109 559693.9 1 24 143.1 520.8 HUMAN 1 16.7215 10.6261 KTEVQAHSPSRKFIL-p P11137;S1480-p KTEVQAHSPSRKFIL 0.230234313621884 0.69927204051983 0.265666666666667 -0.04 12.2553914328184 2.13518809295249 0.265666666666667 -0.04 0.0594923133481829 0.611619313146834 2.37771752173029 -0.538472446510232 P11137 MAP2 P11137.S1480.p_MAP2 P11137_S1480s _1_1_1480_1480 P11137 P11137 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4275.4275.3 10.21 10.21 1.583 3 1 1 0 593.317 1697.9699 S1480s TMT10 1473 (K) KTEVQAHsPSR (K) KT(0.0)EVQAHS(0.99)PS(0.0)R K:TMT10,s:Phosphorylated S MAP2 199979.2 1 10 117.1 560.28 HUMAN 1 12.2554 -2.1352 KTGKFLKSPPLHKNL-p Q9NYF8-4;S339-p KTGKFLKSPPLHKNL 0.936107507392066 0.969138530254666 0.0123333333333333 0.00433333333333336 0.561174031978707 0.192475078475858 0.0123333333333333 0.00433333333333337 0.878784922039899 0.956648714267079 0.159865759953352 0.0569186481267211 Q9NYF8 BCLAF1 Q9NYF8.4.S339.p_BCLAF1 Q9NYF8-4_S339s _1_1_339_339 Q9NYF8-4 Q9NYF8-4|E9PJA7 Isoform 4 of Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17607.17607.3 10.66 8.36 99 1 1 1 0 612.0371 1754.1296 S339s TMT10 336 (K) FLKsPPLHK (N) FLKS(1.0)PPLHK K:TMT10,s:Phosphorylated S BCLAF1 86049.9 3 52 10.3 1293.04 HUMAN 1 0.5612 0.1925 KTGMGSGSAGKEGGP-p Q86YS7-3;S323-p KTGMGSGSAGKEGGP 0.985606509431769 0.009181596584057 -0.00666666666666667 0.493333333333333 0.127092021330472 28.7911811081628 -0.00666666666666672 0.49673020716258 0.971160025552311 0.00132093634321383 -0.037855790078283 6.06349911757379 Q86YS7 C2CD5 Q86YS7.3.S323.p_C2CD5 Q86YS7-3_S323s _1_1_323_323 Q86YS7-3 Q86YS7-3 Isoform 3 of C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6734.6734.2 13.81 13.81 2.058 3 1 1 0 695.843 1310.7139 S323s TMT10 317 (K) TGMGSGsAGK (E) T(0.0)GMGS(0.0)GS(0.99)AGK K:TMT10,s:Phosphorylated S C2CD5 117622.7 5 8 349.1 351.16 HUMAN 1 -0.1271 28.7912 KTGRRKRSAKPETVI-p E9PES4;S714-p KTGRRKRSAKPETVI 0.899823296260135 0.33706197113581 -0.0213333333333333 0.130333333333333 0.897128803442478 6.2581064682626 -0.0213333333333333 0.130333333333333 0.813368070267099 0.236695146763155 -0.247871411294283 1.33008641327383 E9PES4 KIF3A E9PES4.S714.p_KIF3A E9PES4_S714s _1_1_714_714 E9PES4 E9PES4|A0A087X011|J3KPF9|Q9Y496 Kinesin-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30491.30491.3 12.86 12.86 3.409 3 1 1 0 647.0233 1859.089 S714s TMT10 714 (R) sAKPETVIDSLLQ (-) S(0.99)AKPET(0.0)VIDS(0.0)LLQ K:TMT10,s:Phosphorylated S KIF3A 83192.7 5 1 5647.1 17.49 HUMAN 1 -0.8971 6.2581 KTGVTSTSDSEEEGD-p O75475;S273-p KTGVTSTSDSEEEGD 0.414715625274144 0.0329413102447167 -0.129333333333333 0.276833333333333 7.05405568472117 19.9907386091701 -0.129333333333333 0.276833333333333 0.19705816372641 0.0100213478947179 -1.47047209649346 3.87334075435972 O75475 PSIP1 O75475.S273.p_PSIP1 O75475_S273sS275s_2_2_273_275 O75475 O75475|O75475-2|O75475-3 PC4 and SFRS1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9817.9817.2 16.28 16.28 1.12 6 2 2 0 1359.5546 2558.163 S273s S275s TMT10 267 (K) TGVTSTsDsEEEGDDQEGEK (K) T(0.0)GVT(0.0)S(0.0)T(0.0)S(0.99)DS(0.99)EEEGDDQEGEK K:TMT10,s:Phosphorylated S PSIP1 60216.3 24 16 382.1 334.17 HUMAN 2 -7.0541 19.9907 KTHMIVHSPVKPFKC-p Q8N1W2;S542-p KTHMIVHSPVKPFKC 0.442901411005622 0.00423666321237395 -0.192666666666667 -0.722666666666667 6.51805170803532 34.8913002643789 -0.192666666666667 -0.722666666666667 0.222943507362476 0.000324242525596391 -1.37635791614932 -8.05428273779903 Q8N1W2 ZNF710 Q8N1W2.S542.p_ZNF710 Q8N1W2_S542s _1_1_542_542 Q8N1W2 Q8N1W2 Zinc finger protein 710 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13289.13289.4 14.66 14.66 6.96 2 1 1 0 572.8302 2208.3294 S542s TMT10 536 (K) THMIVHsPVKPFK (C) T(0.0)HMIVHS(0.99)PVKPFK K:TMT10,s:Phosphorylated S ZNF710 75999.9 1 1 6012.1 14.66 HUMAN 1 -6.5181 -34.8913 KTHMRIHTGEKPFVC-p Q9H116;T458-p KTHMRIHTGEKPFVC 0.457686581032807 0.077598631942524 -0.109 -0.347 6.2568073438474 14.7261934355207 -0.106687512816243 -0.347 0.236765961026958 0.0336806648999577 -1.33018552030652 -2.82545194440862 Q9H116 GZF1 Q9H116.T458.p_GZF1 Q9H116_T458t _1_1_458_458 Q9H116 Q9H116 GDNF-inducible zinc finger protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11376.11376.4 9.4 9.4 99 1 1 1 0 604.2914 2334.1735 T458t TMT10 456 (R) IHtGEKPFVCDECGAR (F) IHT(1.0)GEKPFVCDECGAR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T GZF1 82145 1 2 1980.1 104.43 HUMAN 1 -6.2568 -14.7262 KTHTDTESEASILGD-p J3KQ48;S55-p KTHTDTESEASILGD 0.526761662881593 0.0879967699826289 0.0846666666666667 -0.212333333333333 5.15193463121723 13.9725164422795 0.0846666666666667 -0.212333333333333 0.305356055492821 0.0400634509804803 1.13182941479321 -2.68626624590921 J3KQ48 PTRH2 J3KQ48.S55.p_PTRH2 J3KQ48_S55sS58s_2_2_55_58 J3KQ48 J3KQ48|Q9Y3E5 Peptidyl-tRNA hydrolase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16867.16891.3 11.61 11.61 3.307 7 2 2 0 886.7265 2498.2299 S55s S58s TMT10 49 (K) THTDTEsEAsILGDSGEYK (M) T(0.0)HT(0.0)DT(0.0)ES(0.99)EAS(0.99)ILGDS(0.0)GEY(0.0)K K:TMT10,s:Phosphorylated S PTRH2 19609.7 1 2 5008.1 23.96 HUMAN 1 5.1519 -13.9725 KTHTRIHSGEKPYKC-p P41182;S597-p KTHTRIHSGEKPYKC 0.109756699463187 0.00232621067136905 -0.343333333333333 -0.791 20.0852683216871 40.5456827674419 -0.343333333333333 -0.791 0.0098055773030735 8.81925141128304e-05 -3.89727380786783 -10.3795496800464 P41182 BCL6 P41182.S597.p_BCL6 P41182_S597s _1_1_597_597 P41182 O14709|Q8N4W9|Q9P2J8|Q8N4W9-2|Q9HCG1|M0QZI7|Q08AN1|Q9P2J8-2|Q6ZNG1|P41182|Q8N823|Q86V71|P41182-2|Q7Z3I0|Q8IYB9|Q8N823-2|O43296|Q5CZA5|A0A075B7G4|Q08ER8|Q8IYI8|Q96N58|A0A087WV98|Q6PDB4|A6NK75|Q494X3|A0A087WSV7|Q8TBZ5|Q9P255|Q5VIY5|Q9Y2G7|Q9BS31|Q9BUG6|A0A0C4DGQ1|Q5CZA5-2|Q03924|Q8N143|M0QX90|Q5VIY5-2|A0A075B7G3|Q9NSJ1|Q9BUG6-2|K7EMC4|Q86XN6|Q86XN6-2|Q86XN6-3|P17035-2|Q6ZN06|A6NNF4-3|Q7L2R6 B-cell lymphoma 6 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8326.8326.4 12.6 12.6 10.72 2 1 1 0 457.2606 1746.0517 S597s TMT10 595 (R) IHsGEKPYK (C) IHS(0.99)GEKPY(0.0)K K:TMT10,s:Phosphorylated S BCL6 80670.9 2 14 557.1 273.04 HUMAN 1 -20.0853 -40.5457 KTIEDLATQLNLKTS-p P39880-3;T1290-p KTIEDLATQLNLKTS 0.131204843499942 0.055356922266883 1.165 -1.74733333333333 18.2319161820212 16.7453188613827 1.165 -1.74733333333333 0.0150247890026565 0.0211576833867016 3.5093536050997 -3.21023959495162 P39880 CUX1 P39880.3.T1290.p_CUX1 P39880-3_T1290t _1_1_1290_1290 P39880-3 P39880-3 Isoform 3 of Homeobox protein cut-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29809.29809.4 9.06 9.06 2.38 5 1 1 0 911.5145 3563.0655 T1290t TMT10 1273 (R) AYQQKPYPSPKTIEDLAtQLNLK (T) AY(0.0)QQKPY(0.0)PS(0.0)PKT(0.0)IEDLAT(0.99)QLNLK K:TMT10,t:Phosphorylated T CUX1 166084.5 1 6 1194.1 167.77 HUMAN 1 18.2319 -16.7453 KTITKYLSPLGKTRD-p Q96QE3;S44-p KTITKYLSPLGKTRD 0.879897888357523 0.00177043297676807 0.0253333333333333 -1.864 1.09318201965892 43.4378109130906 0.0253333333333333 -1.864 0.777466702478858 4.53125923139692e-05 0.297091556338462 -11.791213616345 Q96QE3 ATAD5 Q96QE3.S44.p_ATAD5 Q96QE3_S44s _1_1_44_44 Q96QE3 Q96QE3|A0A075B754|Q96QE3-2 ATPase family AAA domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19965.19965.2 10.05 10.05 3.989 2 1 1 0 658.3747 1235.7764 S44s TMT10 42 (K) YLsPLGK (T) Y(0.0)LS(0.99)PLGK K:TMT10,s:Phosphorylated S ATAD5 209620.3 1 22 316.2 367.51 HUMAN 1 1.0932 -43.4378 KTITLVKSPISVPGG-p P51610;S666-p KTITLVKSPISVPGG 0.0635370415880919 0.0075799697481076 -0.393 -0.489 25.8696048131055 30.2904352736253 -0.393 -0.489 0.00258844844067884 0.000935311927385203 -5.26744652604517 -6.51052678340027 P51610 HCFC1 P51610.S666.p_HCFC1 P51610_S666s _1_1_666_666 P51610 P51610|P51610-2|A6NEM2|P51610-4 Host cell factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31055.31055.3 19.72 19.72 2.15 6 1 1 0 1007.2616 2939.8112 S666s TMT10 660 (K) TITLVKsPISVPGGSALISNLGK (V) T(0.0)IT(0.0)LVKS(0.99)PIS(0.0)VPGGS(0.0)ALIS(0.0)NLGK K:TMT10,s:Phosphorylated S HCFC1 210725.7 13 7 625.1 258.74 HUMAN 1 -25.8696 -30.2904 KTIVLVPSPLGQQQD-p Q96R06;S135-p KTIVLVPSPLGQQQD 0.203067766199695 0.673244380026371 -0.209666666666667 0.043 13.420478622894 2.35021928176734 -0.209666666666667 0.043 0.045493792004654 0.582073827252397 -2.58711818741552 0.5849633941289 Q96R06 SPAG5 Q96R06.S135.p_SPAG5 Q96R06_S135s _1_1_135_135 Q96R06 Q96R06 Sperm-associated antigen 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33378.33378.3 21.16 21.16 21.16 2 1 1 0 851.112 2471.3529 S135s TMT10 129 (K) TIVLVPsPLGQQQDMIFEAR (L) T(0.0)IVLVPS(0.99)PLGQQQDMIFEAR s:Phosphorylated S SPAG5 135788.8 3 5 612.1 261.64 HUMAN 1 -13.4205 2.3502 KTIVMGASFRNTGEI-p P37837;S237-p KTIVMGASFRNTGEI 0.294750125885592 0.00795046595831136 -0.195 0.491666666666667 10.0093160724878 29.9490563394791 -0.195 0.491666666666667 0.0997857194129853 0.0010117992800581 -1.98332902321757 6.4065067842468 P37837 TALDO1 P37837.S237.p_TALDO1 P37837_S237s _1_1_237_237 P37837 P37837|F2Z393 Transaldolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19286.19491.3 13.9 13.13 4.488 3 1 1 0 721.3842 2082.1782 S237s TMT10 231 (K) TIVMGAsFRNTGEIK (A) T(0.0)IVMGAS(0.99)FRNT(0.0)GEIK K:TMT10,s:Phosphorylated S TALDO1 37710.6 6 3 2744.1 72.02 HUMAN 1 -10.0093 29.9491 KTKENRQSIINPDWN-p P46459;S207-p KTKENRQSIINPDWN 0.0360407965324359 0.0566781042660022 -0.581 -0.274666666666667 33.2794700227198 16.6132173502334 -0.581 -0.274666666666667 0.000469951454117915 0.0218111349573034 -7.49538235098936 -3.18448022721485 P46459 NSF P46459.S207.p_NSF P46459_S207s _1_1_207_207 P46459 P46459|I3L0N3|P46459-2 Vesicle-fusing ATPase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20035.20035.3 16.75 16.75 99 1 1 1 0 810.0741 2348.2399 S207s TMT10 203 (K) ENRQsIINPDWNFEK (M) ENRQS(1.0)IINPDWNFEK K:TMT10,s:Phosphorylated S NSF 83106.4 4 3 2984.1 64.07 HUMAN 1 -33.2795 -16.6132 KTKKAESSSDEEEES-p Q8WWQ0;S880-p KTKKAESSSDEEEES 0.455145758341492 0.253553591125318 -0.139833333333333 0.113 6.30559090904999 7.84879683914835 -0.139833333333333 0.113 0.234121290376864 0.164104434191225 -1.33882477705057 1.60841982176911 Q8WWQ0 PHIP Q8WWQ0.S880.p_PHIP Q8WWQ0_S880sS881s_2_2_880_881 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7900.7900.3 8.72 8.72 8.715 4 2 2 0 811.0299 2271.1443 S880s S881s TMT10 876 (K) KAESssDEEEESEK (Q) KAES(0.0)S(0.99)S(0.99)DEEEES(0.0)EK K:TMT10,s:Phosphorylated S PHIP 208454.1 1 28 108.1 577.05 HUMAN 2 -6.3056 7.8488 KTKKSLESINSRLQL-p P62888;S13-p KTKKSLESINSRLQL 0.281398316858658 0.878808270645587 -0.164 -0.0166666666666667 10.4127103367411 0.78792441926445 -0.164 -0.0166666666666667 0.0909345592844681 0.834079712861262 -2.05351254041269 -0.219780388132645 P62888 RPL30 P62888.S13.p_RPL30 P62888_S13s _1_1_13_13 P62888 P62888|A0A0C4DH44|E5RJH3 60S ribosomal protein L30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9817.9817.2 7.84 7.84 7.838 3 1 1 0 607.8036 1134.6316 S13s TMT10 10 (K) SLEsINSR (L) S(0.0)LES(0.99)INS(0.0)R s:Phosphorylated S RPL30 12955 1 2 4915.1 25.12 HUMAN 1 -10.4127 -0.7879 KTKNKPLSPIKLTPT-p P35251;S156-p KTKNKPLSPIKLTPT 0.321412916785627 0.00118815654647091 0.309666666666667 -1.19466666666667 9.22399189314252 48.3019084387587 0.309666666666667 -1.19466666666667 0.119564103185677 1.47845856005161e-05 1.84714408712134 -14.5789031021939 P35251 RFC1 P35251.S156.p_RFC1 P35251_S156s _1_1_156_156 P35251 P35251|P35251-2|A0A1W2PP02 Replication factor C subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30576.30576.5 24.27 24.27 2.84 7 1 1 0 697.9913 3405.9713 S156s TMT10 152 (K) NKPLsPIKLTPTSVLDYFGTGSVQR (S) NKPLS(0.99)PIKLT(0.0)PT(0.0)S(0.0)VLDY(0.0)FGT(0.0)GS(0.0)VQR K:TMT10,s:Phosphorylated S RFC1 128765.8 11 7 316.1 367.51 HUMAN 1 9.224 -48.3019 KTKPATPSL______-p Q8TD16;S823-p KTKPATPSL______ 0.913418530295954 0.0398890720786787 -0.0173333333333333 -0.27 0.767312000765601 18.7614082316159 -0.0173333333333333 -0.27 0.838047818512629 0.0133002307834023 -0.214447512119235 -3.61491407991482 Q8TD16 BICD2 Q8TD16.S823.p_BICD2 Q8TD16_S823s _1_1_823_823 Q8TD16 Q8TD16 Protein bicaudal D homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13287.13287.2 10.85 10.85 10.849 3 1 1 0 676.8838 1272.7928 S823s TMT10 817 (K) TKPATPsL (-) T(0.0)KPAT(0.0)PS(0.99)L K:TMT10,s:Phosphorylated S BICD2 93759.7 2 8 1471.1 139.55 HUMAN 1 -0.7673 -18.7614 KTKQNVLSPEKEKQM-p O43933;S354-p KTKQNVLSPEKEKQM 0.326502819643871 0.00373575800751117 0.174333333333333 -0.609333333333333 9.09822719517603 36.0126142097118 0.174333333333333 -0.609333333333333 0.123077107321647 0.000250460116946211 1.82536795312738 -8.47456831590095 O43933 PEX1 O43933.S354.p_PEX1 O43933_S354s _1_1_354_354 O43933 O43933|A0A0C4DG33 Peroxisome biogenesis factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11968.11968.3 12.48 8.97 99 1 1 1 0 647.0341 1859.1205 S354s TMT10 350 (K) QNVLsPEKEK (Q) QNVLS(1.0)PEKEK K:TMT10,s:Phosphorylated S PEX1 143891.4 1 1 1753.1 117.58 HUMAN 1 9.0982 -36.0126 KTKTPKHSPIKEEPC-p Q68DK7;S362-p KTKTPKHSPIKEEPC 0.145152146047681 0.0284084393444339 -0.355333333333333 -0.432333333333333 17.0803217605453 20.9474563885901 -0.355333333333333 -0.432333333333333 0.0195869955179504 0.008039968757748 -3.27847163844427 -4.08124785920435 Q68DK7 MSL1 Q68DK7.S362.p_MSL1 Q68DK7_S362s _1_1_362_362 Q68DK7 Q68DK7|J3KSZ8|J3QQY0|Q68DK7-2|Q68DK7-3 Male-specific lethal 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12537.12537.3 17.41 13.56 5.398 4 1 1 0 942.4766 2745.4518 S362s TMT10 361 (K) HsPIKEEPCGSLSETVCK (R) HS(0.99)PIKEEPCGS(0.0)LS(0.0)ET(0.0)VCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MSL1 67811.9 14 8 324.1 362.01 HUMAN 1 -17.0803 -20.9475 KTKVIHDSQETAEKE-p Q9NSI6-2;S2118-p KTKVIHDSQETAEKE 0.677958358851087 0.66660546674722 0.0986666666666667 0.0733333333333334 3.1592055188157 2.41043368731238 0.0986666666666666 0.0733333333333334 0.483147178993883 0.57405913368847 0.752567324579823 0.597817259783042 Q9NSI6 BRWD1 Q9NSI6.2.S2118.p_BRWD1 Q9NSI6-2_S2118s _1_1_2118_2118 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8050.8050.3 15.05 15.05 3.049 2 1 1 0 598.9731 1714.9376 S2118s TMT10 2114 (K) VIHDsQETAEK (E) VIHDS(0.99)QET(0.0)AEK K:TMT10,s:Phosphorylated S BRWD1 259915.1 1 24 208.1 444.81 HUMAN 1 3.1592 2.4104 KTLEEPVSTEKNIG_-p Q99590;S1457-p KTLEEPVSTEKNIG_ 0.868689771390984 0.00252025381803363 -0.0323333333333333 -0.793666666666667 1.19305667166132 39.7239770812258 -0.0323333333333333 -0.793666666666667 0.759791328833626 0.000106561982567821 -0.321627399931651 -10.0078981588819 Q99590 SCAF11 Q99590.S1457.p_SCAF11 Q99590_S1457s _1_1_1457_1457 Q99590 Q99590|F8VXG7|Q99590-2 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11958.11958.3 13.39 10.34 1.187 3 1 1 0 676.7109 1948.157 S1457s TMT10 1450 (K) KTLEEPVsTEK (N) KT(0.0)LEEPVS(0.99)T(0.0)EK K:TMT10,s:Phosphorylated S SCAF11 166418 1 26 120.1 549.85 HUMAN 1 -1.1931 -39.724 KTLKNIISPPWDFRE-p Q13042;S560-p KTLKNIISPPWDFRE 0.111154875717767 0.763807024415839 -0.412 -0.0366666666666667 19.9317341127359 1.61632679525441 -0.412 -0.0366666666666667 0.0101584299165059 0.689234995647285 -3.86431506810968 -0.422006831026185 Q13042 CDC16 Q13042.S560.p_CDC16 Q13042_S560s _1_1_560_560 Q13042 Q13042|Q13042-2|Q13042-3|Q13042-4|Q5T8C6 Cell division cycle protein 16 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31972.32173.3 16.08 16.08 99 1 1 1 0 848.7707 2464.3277 S560s TMT10 557 (K) NIIsPPWDFREFEVEK (Q) NIIS(1.0)PPWDFREFEVEK K:TMT10,s:Phosphorylated S CDC16 72453.1 2 1 3652.1 46.07 HUMAN 1 -19.9317 -1.6163 KTLLPVPSFEDVSIP-p Q9NX20;S38-p KTLLPVPSFEDVSIP 0.560899556742354 0.0640148496242057 0.0806666666666667 0.386333333333333 4.6246270772771 15.8911832604325 0.0806666666666667 0.386333333333333 0.34477621076306 0.0257561931901794 1.03479685645108 3.0451904917523 Q9NX20 MRPL16 Q9NX20.S38.p_MRPL16 Q9NX20_S38s _1_1_38_38 Q9NX20 Q9NX20 39S ribosomal protein L16, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30514.30514.4 18.33 14.66 7.261 3 1 1 0 691.6443 2683.5889 S38s TMT10 32 (K) TLLPVPsFEDVSIPEKPK (L) T(0.0)LLPVPS(0.99)FEDVS(0.0)IPEKPK K:TMT10,s:Phosphorylated S MRPL16 28505.8 1 1 5541.1 18.33 HUMAN 1 4.6246 15.8912 KTLLPWDSDESPEAS-p Q9UMN6;S1032-p KTLLPWDSDESPEAS 0.549625979110013 0.0183351288076971 -0.161 -0.358 4.79834146893485 23.9063292818568 -0.161 -0.358 0.331257601590772 0.00406787006012677 -1.06697016205617 -4.76639793140551 Q9UMN6 KMT2B Q9UMN6.S1032.p_KMT2B Q9UMN6_S1032s _1_1_1032_1032 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25770.25770.3 22.06 22.06 1.673 4 1 1 0 838.7311 2434.2088 S1032s TMT10 1026 (K) TLLPWDsDESPEASPGPPGPR (R) T(0.0)LLPWDS(0.99)DES(0.0)PEAS(0.0)PGPPGPR s:Phosphorylated S KMT2B 297845.7 1 12 388.1 332.76 HUMAN 1 -4.7983 -23.9063 KTLLQDESLNIFQNL-p P51160;S646-p KTLLQDESLNIFQNL 0.601379056634462 0.593576710254775 -0.078 -0.068 4.0795430717125 3.0655469231656 -0.078 -0.068 0.390882018961967 0.493679743411781 -0.932304107967937 -0.73359019940169 P51160 PDE6C P51160.S646.p_PDE6C P51160_S646s_1_1_646_646 P51160 P51160 Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15506.15506.5 9.67 9.67 8.687 4 1 1 0 665.9457 3242.7574 S646s N648n N652n N654n Hydrogen 633 (R) HHLEYSKTLLQDEsLnIFQnLnK (R) HHLEY(0.0)S(0.0)KT(0.0)LLQDES(0.99)LN(1.0)IFQN(1.0)LN(1.0)K K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated PDE6C 99829.6 2 1 6767.1 9.67 HUMAN 1 -4.0795 -3.0655 KTLMNAVSPLKSIVA-p Q12768;S917-p KTLMNAVSPLKSIVA 0.257569887431111 0.0106375039713026 -0.303 0.398 11.1924859197705 27.6719616056368 -0.303 0.398 0.0759891187536025 0.00170924311595153 -2.18986611688087 5.74572644537989 Q12768 KIAA0196 Q12768.S917.p_KIAA0196 Q12768_S917s _1_1_917_917 Q12768 Q12768|E7EQI7 WASH complex subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22376.22376.2 11.54 11.54 8.594 2 1 1 0 806.4512 1531.9282 S917s TMT10 911 (K) TLMNAVsPLK (S) T(0.0)LMNAVS(0.99)PLK K:TMT10,s:Phosphorylated S WASHC5 135196.9 4 1 6464.1 11.54 HUMAN 1 -11.1925 27.672 KTLPKQPSPQKSEPL-p Q6PCD5;S266-p KTLPKQPSPQKSEPL 0.144678447430122 0.00227084207720462 -0.311666666666667 -0.962666666666667 17.137434354306 40.8703087258036 -0.311666666666667 -0.962666666666667 0.0193310998720073 8.18406608206419e-05 -3.28975287341423 -10.5298282406477 Q6PCD5 RFWD3 Q6PCD5.S266.p_RFWD3 Q6PCD5_S266s _1_1_266_266 Q6PCD5 Q6PCD5 E3 ubiquitin-protein ligase RFWD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10474.10474.3 11.65 11.65 4.478 2 1 1 0 631.0396 1811.1358 S266s TMT10 260 (K) TLPKQPsPQK (S) T(0.0)LPKQPS(0.99)PQK K:TMT10,s:Phosphorylated S RFWD3 86461.7 5 1 3484.1 49.92 HUMAN 1 -17.1374 -40.8703 KTLPQQESLEIELAE-p Q5VZK9;S880-p KTLPQQESLEIELAE 0.147946322560902 0.0875843998240182 -0.248666666666667 -0.202333333333333 16.8318472978619 14.0000676692119 -0.248666666666667 -0.202333333333333 0.0207403112811118 0.0398100967530037 -3.22958863695949 -2.69131644149424 Q5VZK9 LRRC16A Q5VZK9.S880.p_LRRC16A Q5VZK9_S880s _1_1_880_880 Q5VZK9 Q5VZK9|Q5VZK9-2 F-actin-uncapping protein LRRC16A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24556.24556.4 18.42 18.42 8.818 2 1 1 0 737.9081 2868.6537 S880s TMT10 874 (K) TLPQQEsLEIELAEEKPVK (R) T(0.0)LPQQES(0.99)LEIELAEEKPVK K:TMT10,s:Phosphorylated S CARMIL1 152809.3 2 2 280.1 388.82 HUMAN 1 -16.8318 -14.0001 KTLPRSSSMAAGLER-p I3L4C2;S399-p KTLPRSSSMAAGLER 0.393895312924686 0.469651871890627 0.159666666666667 0.0733333333333333 7.46544007141566 4.3755183601304 0.159666666666667 0.0733333333333333 0.179248691012689 0.365130543829321 1.54226487763881 0.988084391481064 I3L4C2 BAIAP2 I3L4C2.S399.p_BAIAP2 I3L4C2_S399s_1_1_399_399 I3L4C2 I3L4C2|Q9UQB8|Q9UQB8-2|Q9UQB8-6|Q9UQB8-4|Q9UQB8-5|Q9UQB8-3|B4DWA1 Brain-specific angiogenesis inhibitor 1-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8297.8831.2 8.61 3.02 1.113 3 1 1 0 823.3826 1564.8063 S399s N407n TMT10 397 (R) SSsMAAGLERnGR (M) S(0.0)S(0.0)S(0.99)MAAGLERN(1.0)GR s:Phosphorylated S,n:Deamidated BAIAP2 61608.4 8 13 386.1 333.05 HUMAN 1 7.4654 4.3755 KTLQRLRSFKDKRLA-p Q8TF30;S544-p KTLQRLRSFKDKRLA 0.223830115070576 0.0147240180517907 -0.265666666666667 -0.657 12.4911602269244 25.3693101451735 -0.265666666666667 -0.657 0.0563487098941821 0.00290448398041899 -2.41976812143117 -5.13139561617699 Q8TF30 WHAMM Q8TF30.S544.p_WHAMM Q8TF30_S544s _1_1_544_544 Q8TF30 Q8TF30 WASP homolog-associated protein with actin, membranes and microtubules HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.6197.6197.3 7.27 7.27 99 1 1 1 0 477.9427 1351.8462 S544s Hydrogen 542 (R) LRsFKDK (R) LRS(1.0)FKDK K:TMT10-Lys-Only,s:Phosphorylated S WHAMM 91892.7 1 4 3009.1 63.37 HUMAN 1 -12.4912 -25.3693 KTLRNNKSNMVETLE-p O14522-1;S1440-p KTLRNNKSNMVETLE 0.173549529236142 0.178494770311248 -0.330666666666667 0.193666666666667 15.1585554624229 9.84535993493655 -0.330666666666667 0.193666666666667 0.030489089401457 0.103624871856586 -2.90824162178922 1.95407982409815 O14522 PTPRT O14522.1.S1440.p_PTPRT O14522-1_S1440s_1_1_1440_1440 O14522-1 O14522-1|A0A075B6H0|B1AJR9|B1AJR8|B1AJR6|B1AJS0|A0A087X1X2 Isoform 1 of Receptor-type tyrosine-protein phosphatase T HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24650.24650.2 8.77 2.28 6.512 3 1 1 0 940.9551 1799.9614 S1440s N1441n TMT10 1440 (K) snMVETLEQYK (F) S(0.99)N(1.0)MVET(0.0)LEQY(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated PTPRT 166054.3 1 3 4867.1 25.62 HUMAN 1 -15.1586 9.8454 KTLSHSESQVFALTP-p Q8NEV8;S1505-p KTLSHSESQVFALTP 0.272310499750431 0.0572289522546229 0.188 -0.274 10.7025911226477 16.5535771677639 0.188 -0.274 0.0850630376841915 0.0221127259306314 2.10408368836402 -3.17287908770428 Q8NEV8 EXPH5 Q8NEV8.S1505.p_EXPH5 Q8NEV8_S1505s _1_1_1505_1505 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21632.21632.4 20.06 20.06 2.307 5 1 1 0 626.8394 2424.3651 S1505s TMT10 1499 (K) TLSHSEsQVFALTPALHK (L) T(0.0)LS(0.0)HS(0.0)ES(0.99)QVFALT(0.0)PALHK K:TMT10,s:Phosphorylated S EXPH5 223884.5 3 23 129.1 537.25 HUMAN 1 10.7026 -16.5536 KTLSKYESSEIRLLE-p Q6UXH1-5;S70-p KTLSKYESSEIRLLE 0.70004138781017 0.321018665116152 -0.0746666666666667 -0.168333333333333 2.90953516278576 6.524261559799 -0.0746666666666667 -0.168333333333333 0.511736605172015 0.222624954658769 -0.701977202997285 -1.37709789742414 Q6UXH1 CRELD2 Q6UXH1.5.S70.p_CRELD2 Q6UXH1-5_S70s _1_1_70_70 Q6UXH1-5 Q6UXH1-5|Q6UXH1-6|Q6UXH1-4|Q6UXH1-2|Q6UXH1-3 Isoform 5 of Cysteine-rich with EGF-like domain protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12013.12013.2 10.83 5.25 1.172 5 1 1 0 925.9866 1771.0002 S70s TMT10 64 (K) TLSKYEsSEIR (L) T(0.0)LS(0.0)KY(0.0)ES(0.99)S(0.0)EIR K:TMT10,s:Phosphorylated S CRELD2 45917.2 3 1 6582.1 10.83 HUMAN 1 -2.9095 -6.5243 KTLSPGDSFSTFDTP-p Q9NQR4;S137-p KTLSPGDSFSTFDTP 0.670942826613126 0.851147548845178 0.0653333333333333 0.0233333333333334 3.24669825377482 0.984132336859847 0.0653333333333333 0.0233333333333333 0.473511111421922 0.797235751877249 0.77008916476819 0.269866917707332 Q9NQR4 NIT2 Q9NQR4.S137.p_NIT2 Q9NQR4_S137s _1_1_137_137 Q9NQR4 Q9NQR4 Omega-amidase NIT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22497.22497.3 14.57 14.57 1.126 7 1 1 0 754.0001 2180.0168 S137s TMT10 131 (K) TLSPGDsFSTFDTPYCR (V) T(0.0)LS(0.0)PGDS(0.99)FS(0.0)T(0.0)FDT(0.0)PY(0.0)CR C:Carbamidomethylation,s:Phosphorylated S NIT2 31006.8 2 1 6026.1 14.57 HUMAN 1 3.2467 0.9841 KTLVTQNSGVEALIH-p P14923;S433-p KTLVTQNSGVEALIH 0.310258222482976 0.108188289321211 0.159 0.218333333333333 9.49946897652558 12.7614812191449 0.159 0.218333333333333 0.1122155654886 0.0529482825925938 1.89486623330741 2.46685076232267 P14923 JUP P14923.S433.p_JUP P14923_S433s _1_1_433_433 P14923 P14923 Junction plakoglobin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36628.36628.3 19.44 19.44 4.135 3 1 1 0 748.7492 2164.2651 S433s TMT10 427 (K) TLVTQNsGVEALIHAILR (A) T(0.0)LVT(0.0)QNS(0.99)GVEALIHAILR s:Phosphorylated S JUP 82485 1 7 957.1 195.02 HUMAN 1 9.4995 12.7615 KTLYSFFSPSPARKR-p P13051;S12-p KTLYSFFSPSPARKR 0.220304594594813 0.00508122719502233 0.305 -1.10833333333333 12.6491860835644 33.4105116585481 0.305 -1.10833333333333 0.0543352152221771 0.000455983191703927 2.44804010286281 -7.5269906167725 P13051 UNG P13051.S12.p_UNG P13051_S12s _1_1_12_12 P13051 P13051 Uracil-DNA glycosylase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26934.26934.2 13.71 11.02 1.661 5 1 1 0 841.4124 1601.8525 S12s TMT10 6 (K) TLYSFFsPSPAR (K) T(0.0)LY(0.0)S(0.0)FFS(0.99)PS(0.0)PAR s:Phosphorylated S UNG 34816 1 1 1324.1 154.1 HUMAN 1 12.6492 -33.4105 KTMGRKESEEELEAQ-p Q92609-2;S606-p KTMGRKESEEELEAQ 0.0360961121648541 0.00394546944963473 -0.551 -0.617 33.1110715621361 35.4483719404516 -0.551 -0.617 0.000488531805940723 0.000285208724208895 -7.43743305957194 -8.26074810113869 Q92609 TBC1D5 Q92609.2.S606.p_TBC1D5 Q92609-2_S606s_1_1_606_606 Q92609-2 Q92609-2|C9J3F6 Isoform 2 of TBC1 domain family member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.36815.36815.4 17.36 14.71 9.774 2 1 1 0 949.2174 3712.9017 S606s N622n TMT10 604 (R) KEsEEELEAQISFLQGQLnDLDAMCK (Y) KES(0.99)EEELEAQIS(0.0)FLQGQLN(1.0)DLDAMCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated TBC1D5 91784.7 5 8 328.1 359.68 HUMAN 1 -33.1111 -35.4484 KTMIRKRSFGNPFEG-p Q96RR4-3;S495-p KTMIRKRSFGNPFEG 0.405599270487362 0.0163261641639302 -0.12 0.432333333333333 7.23775502675831 24.6818721808124 -0.12 0.432333333333333 0.188896754978816 0.00340261476270185 -1.50257015152148 4.95756811420721 Q96RR4 CAMKK2 Q96RR4.3.S495.p_CAMKK2 Q96RR4-3_S495s _1_1_495_495 Q96RR4-3 Q96RR4|Q96RR4-7|Q96RR4-4|Q96RR4-3|Q96RR4-2 Isoform 3 of Calcium/calmodulin-dependent protein kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18233.18233.2 12.06 12.06 12.062 2 1 1 0 703.8202 1326.664 S495s TMT10 495 (R) sFGNPFEGSR (R) S(0.99)FGNPFEGS(0.0)R s:Phosphorylated S CAMKK2 60285.4 3 11 1793.1 114.32 HUMAN 1 -7.2378 24.6819 KTMPLRWSFGSKEKP-p Q70EL4;S818-p KTMPLRWSFGSKEKP 0.323165519835905 0.409063824816687 -0.286333333333333 0.0996666666666667 9.18324183475585 5.16771466880944 -0.286333333333333 0.0996666666666667 0.120691258675998 0.304248561202041 -1.84008766199229 1.13446987447737 Q70EL4 USP43 Q70EL4.S818.p_USP43 Q70EL4_S818s _1_1_818_818 Q70EL4 Q70EL4|Q70EL4-4|Q70EL4-3|Q70EL4-2 Ubiquitin carboxyl-terminal hydrolase 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24681.24681.3 12.84 12.84 2.387 3 1 1 0 616.6601 1767.998 S818s TMT10 812 (K) TMPLRWsFGSK (E) T(0.0)MPLRWS(0.99)FGS(0.0)K K:TMT10,s:Phosphorylated S USP43 124119.2 2 7 817.1 219.69 HUMAN 1 -9.1832 5.1677 KTNLDRKSLGSLPKV-p Q14241;S410-p KTNLDRKSLGSLPKV 0.389389394272965 0.0145233053233209 -0.200333333333333 -0.512333333333333 7.57892911084948 25.4666960956215 -0.200333333333333 -0.512333333333333 0.174625269316478 0.00284007880271598 -1.5620185453127 -5.15636303263492 Q14241 TCEB3 Q14241.S410.p_TCEB3 Q14241_S410s _1_1_410_410 Q14241 Q14241 Elongin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17017.17017.2 9.66 2.23 2.174 2 1 1 0 620.361 1159.7451 S410s TMT10 410 (K) sLGSLPK (V) S(0.99)LGS(0.0)LPK K:TMT10,s:Phosphorylated S ELOA 90363.7 1 6 2069.1 99.52 HUMAN 1 -7.5789 -25.4667 KTNRATGSPSVRRMK-p Q8IV32;S264-p KTNRATGSPSVRRMK 0.615696262530374 0.00879549268714015 0.0723333333333333 -0.846333333333333 3.90846471273605 29.1468387592018 0.0723333333333333 -0.846333333333333 0.406587037548145 0.00121707158786221 0.899591645023109 -6.16727763022827 Q8IV32 CCDC71 Q8IV32.S264.p_CCDC71 Q8IV32_S264s _1_1_264_264 Q8IV32 Q8IV32 Coiled-coil domain-containing protein 71 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3643.3643.3 7.64 6.78 1.149 3 1 1 0 413.8854 1159.6745 S264s TMT10 261 (R) ATGsPSVRR (M) AT(0.0)GS(0.99)PS(0.0)VRR s:Phosphorylated S CCDC71 49818.4 1 3 3496.1 49.75 HUMAN 1 3.9085 -29.1468 KTNSPAYSDISDAGE-p O15014;S846-p KTNSPAYSDISDAGE 0.426535703473181 0.0497997777102317 -0.1645 0.277333333333333 6.81425454699955 17.4198331394787 -0.1645 0.277333333333333 0.208244982059372 0.0181140968755368 -1.42845865792405 3.34316100528303 O15014 ZNF609 O15014.S846.p_ZNF609 O15014_S842sS846s_2_2_842_846 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19264.19264.4 19.5 19.5 1.108 6 2 2 0 822.8868 3128.5838 S842s S846s TMT10 840 (K) TNsPAYsDISDAGEDGEGKVDSVK (S) T(0.0)NS(0.99)PAY(0.0)S(0.99)DIS(0.0)DAGEDGEGKVDS(0.0)VK K:TMT10,s:Phosphorylated S ZNF609 152443.5 8 37 63.1 699.07 HUMAN 2 -6.8143 17.4198 KTPARHQSFGAAVLS-p Q5VV41;S107-p KTPARHQSFGAAVLS 0.763984617297711 0.819095608038349 -0.0433333333333333 -0.0226666666666666 2.24171620955696 1.21263369988017 -0.0433333333333334 -0.0226666666666666 0.596799401653209 0.756374066617959 -0.561690507944211 -0.326363448271781 Q5VV41 ARHGEF16 Q5VV41.S107.p_ARHGEF16 Q5VV41_S107s _1_1_107_107 Q5VV41 Q5VV41 Rho guanine nucleotide exchange factor 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11654.11654.2 16.02 16.02 8.028 2 1 1 0 741.376 1401.78 S107s TMT10 105 (R) HQsFGAAVLSR (E) HQS(0.99)FGAAVLS(0.0)R s:Phosphorylated S ARHGEF16 80388.8 7 4 597.1 263.65 HUMAN 1 -2.2417 -1.2126 KTPAVSISCLELSNN-p Q9Y6M5;S468-p KTPAVSISCLELSNN 0.715960741537752 0.0199468082404388 -0.0566666666666667 -0.544 2.73754643830781 23.3081697282284 -0.0566666666666667 -0.544 0.532408960600879 0.00466856088660486 -0.666581568447859 -4.62239173733434 Q9Y6M5 SLC30A1 Q9Y6M5.S468.p_SLC30A1 Q9Y6M5_S468s _1_1_468_468 Q9Y6M5 Q9Y6M5 Zinc transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27439.27439.3 16.62 16.62 2.719 4 1 1 0 805.0867 2333.2787 S468s TMT10 462 (K) TPAVSIsCLELSNNLEK (K) T(0.0)PAVS(0.0)IS(0.99)CLELS(0.0)NNLEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLC30A1 56325.8 3 2 2465.1 82.17 HUMAN 1 -2.7375 -23.3082 KTPCRHQSPEIVREF-p O75575;S62-p KTPCRHQSPEIVREF 0.338038342621858 0.236232278866466 -0.192333333333333 -0.232333333333333 8.76869984341376 8.25210141184443 -0.192333333333333 -0.232333333333333 0.132779190210809 0.149551185072898 -1.76832455530367 -1.67831777602042 O75575 CRCP O75575.S62.p_CRCP O75575_S62s _1_1_62_62 O75575 O75575|O75575-3 DNA-directed RNA polymerase III subunit RPC9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29011.29011.4 11.82 11.82 6.43 2 1 1 0 577.3235 2226.3011 S62s TMT10 60 (R) HQsPEIVREFLTALK (S) HQS(0.99)PEIVREFLT(0.0)ALK K:TMT10,s:Phosphorylated S CRCP 16927.8 1 1 6417.1 11.82 HUMAN 1 -8.7687 -8.2521 KTPEGRASPAPGSGH-p O94826;S91-p KTPEGRASPAPGSGH 0.240543868700249 0.0297329085588789 0.174333333333333 0.283666666666667 11.8274869047881 20.6613731257114 0.174333333333333 0.283666666666667 0.0656525062220515 0.00858741966799361 2.30177246554509 4.01842788600171 O94826 TOMM70A O94826.S91.p_TOMM70A O94826_S91s _1_1_91_91 O94826 O94826 Mitochondrial import receptor subunit TOM70 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12072.12072.3 24.1 18.51 4.454 3 1 1 0 893.7452 2599.2521 S91s TMT10 90 (R) AsPAPGSGHPEGPGAHLDMNSLDR (A) AS(0.99)PAPGS(0.0)GHPEGPGAHLDMNS(0.0)LDR s:Phosphorylated S TOMM70 68138.3 25 3 776.1 227.2 HUMAN 1 11.8275 20.6614 KTPEPRRSPLGQKRG-p P54278;S445-p KTPEPRRSPLGQKRG 0.387274082114903 0.43241591118353 -0.136333333333333 -0.167333333333333 7.62009891087257 4.8514460881604 -0.136333333333333 -0.167333333333333 0.172977696297494 0.327231717048621 -1.56917974955165 -1.07655106007154 P54278 PMS2 P54278.S445.p_PMS2 P54278_S445s _1_1_445_445 P54278 P54278|C9J167|P54278-3 Mismatch repair endonuclease PMS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5886.5886.4 10.86 10.86 4.264 2 1 1 0 476.7685 1824.0856 S445s TMT10 439 (K) TPEPRRsPLGQK (R) T(0.0)PEPRRS(0.99)PLGQK K:TMT10,s:Phosphorylated S PMS2 96993.1 5 2 1932.1 106.31 HUMAN 1 -7.6201 -4.8514 KTPHPVLTPVAANQA-p P35658-3;T1157-p KTPHPVLTPVAANQA 0.814399806622497 0.0210732899982648 -0.039 -0.509333333333333 1.7103383229022 22.9237895586214 -0.039 -0.509333333333333 0.674475482846266 0.00510059738773598 -0.443653970014642 -4.53138103993056 P35658 NUP214 P35658.3.T1157.p_NUP214 P35658-3_T1157t _1_1_1157_1157 P35658-3 P35658-5|P35658-3|P35658-4|P35658-2|A0A0A0MSW3 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13161.13161.3 14.59 14.59 7.841 2 1 1 0 694.722 2002.185 T1157t TMT10 1151 (K) TPHPVLtPVAANQAK (Q) T(0.0)PHPVLT(0.99)PVAANQAK K:TMT10,t:Phosphorylated T NUP214 214428.5 3 21 111.1 572.27 HUMAN 1 -1.7103 -22.9238 KTPPAPKTPPSSGEP-p P10636;T498-p KTPPAPKTPPSSGEP 0.175458928500627 0.0829283633876042 0.302666666666667 -0.324333333333333 15.0399901513593 14.3152473325909 0.302666666666667 -0.324333333333333 0.0313329282978012 0.0370233119862984 2.88595472914214 -2.74928991578689 P10636 MAPT P10636.T498.p_MAPT P10636_T498t _1_1_498_498 P10636 P10636|A0A0G2JPD5|A0A0G2JQJ7|P10636-8|P10636-7|P10636-5|P10636-6|P10636-4|P10636-2|I3L170|P10636-3 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8227.8436.5 15.23 15.23 5.647 5 1 1 0 554.9017 2690.508 T498t TMT10 492 (K) TPPAPKtPPSSGEPPKSGDR (S) T(0.0)PPAPKT(0.99)PPS(0.0)S(0.0)GEPPKS(0.0)GDR K:TMT10,t:Phosphorylated T MAPT 79154.4 21 9 119.1 551.6 HUMAN 1 15.04 -14.3152 KTPPPRPSPLEAGSD-p Q9BUA3;S55-p KTPPPRPSPLEAGSD 0.136948588581255 0.146339254233682 -0.310666666666667 0.186 17.7132970283062 10.9926544587775 -0.310666666666667 0.186 0.0169305200014525 0.0795672877174689 -3.40447283536775 2.15385222741969 Q9BUA3 C11orf84 Q9BUA3.S55.p_C11orf84 Q9BUA3_S55s _1_1_55_55 Q9BUA3 Q9BUA3 SPIN1-docking protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12021.12021.3 10.96 6.61 2.196 3 1 1 0 887.1027 2579.3176 S55s TMT10 49 (K) TPPPRPsPLEAGSDGCEEPK (Q) T(0.0)PPPRPS(0.99)PLEAGS(0.0)DGCEEPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C11orf84 41321.3 1 2 884.1 206.69 HUMAN 1 -17.7133 10.9927 KTPQGREYGMIYLGK-p Q7KZF4;Y109-p KTPQGREYGMIYLGK 0.267509385465911 0.0438814725197946 -0.307 0.258666666666667 10.8506055341085 18.1885348097113 -0.307 0.258666666666667 0.082212801315529 0.0151756226492777 -2.12995673168203 3.4976207674403 Q7KZF4 SND1 Q7KZF4.Y109.p_SND1 Q7KZF4_Y109y _1_1_109_109 Q7KZF4 Q7KZF4 Staphylococcal nuclease domain-containing protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.20155.20206.3 15.46 8.47 2.198 3 1 1 0 717.7096 2071.1411 Y109y TMT10 103 (K) TPQGREyGMIYLGK (D) T(0.0)PQGREY(0.99)GMIY(0.0)LGK K:TMT10,y:Phosphorylated Y SND1 102679.8 3 1 231.1 15.46 HUMAN 1 -10.8506 18.1885 KTPRGTKTPINRNQL-p O94776;T540-p KTPRGTKTPINRNQL 0.752880589938391 0.0137763487721158 -0.056 -0.375333333333333 2.35320344475919 25.8416757877411 -0.056 -0.375333333333333 0.581674004871439 0.00260514812214834 -0.585674694335524 -5.25330848654873 O94776 MTA2 O94776.T540.p_MTA2 O94776_T540t _1_1_540_540 O94776 O94776 Metastasis-associated protein MTA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.4790.4790.3 7.74 1.87 1.338 2 1 1 0 475.6059 1344.8364 T540t TMT10 537 (R) GTKtPINR (N) GT(0.0)KT(0.99)PINR K:TMT10,t:Phosphorylated T MTA2 75763.5 1 7 2100.1 97.64 HUMAN 1 -2.3532 -25.8417 KTPSESNSPSSSSLS-p Q17R98;S965-p KTPSESNSPSSSSLS 0.572719143373661 0.154810537055716 0.0916666666666667 -0.173666666666667 4.45633401621078 10.6542138425119 0.0916666666666667 -0.173666666666667 0.358398842501917 0.0860158758263294 1.00341349307937 -2.09472476135335 Q17R98 ZNF827 Q17R98.S965.p_ZNF827 Q17R98_S965s _1_1_965_965 Q17R98 Q17R98-3|G5E9Z1|Q17R98-2 Zinc finger protein 827 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13585.13585.4 20.01 13.98 1.152 14 1 1 0 1050.0153 4117.0827 S965s TMT10 958 (R) KTPSESNsPSSSSLSALSDSANSKDDSDGSQK (N) KT(0.0)PS(0.0)ES(0.0)NS(0.99)PS(0.0)S(0.0)S(0.0)S(0.0)LS(0.0)ALS(0.0)DS(0.0)ANS(0.0)KDDS(0.0)DGS(0.0)QK K:TMT10,s:Phosphorylated S ZNF827 120760.6 3 6 1614.1 127.54 HUMAN 1 4.4563 -10.6542 KTPSFGISAPQVSIP-p Q09666;S5190-p KTPSFGISAPQVSIP 0.373737854391693 0.0514037430841671 -0.179 0.242 7.91765510838925 17.2044855168521 -0.179 0.242 0.161523043481069 0.0190349371993391 -1.6208726535083 3.30046626984386 Q09666 AHNAK Q09666.S5190.p_AHNAK Q09666_S5190s _1_1_5190_5190 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32094.32296.3 16.77 13.59 1.718 4 1 1 0 907.8268 2641.4965 S5190s TMT10 5184 (K) TPSFGIsAPQVSIPDVNVNLK (G) T(0.0)PS(0.0)FGIS(0.99)APQVS(0.0)IPDVNVNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 121 1.1 4313.36 HUMAN 1 -7.9177 17.2045 KTPTVPDSPGYMGPT-p Q765P7;S601-p KTPTVPDSPGYMGPT 0.285079525574219 0.0407386282755306 -0.161333333333333 -0.318 10.2880193188564 18.6331793501076 -0.161333333333333 -0.318 0.0935832380682014 0.0136987854869652 -2.03179669604524 -3.58849256500632 Q765P7 MTSS1L Q765P7.S601.p_MTSS1L Q765P7_S601s _1_1_601_601 Q765P7 Q765P7|A0A087WXN9 MTSS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14843.14843.3 15.27 15.27 3.345 5 1 1 0 628.9631 1804.9101 S601s TMT10 595 (K) TPTVPDsPGYMGPTR (A) T(0.0)PT(0.0)VPDS(0.99)PGY(0.0)MGPT(0.0)R s:Phosphorylated S MTSS1L 80498.5 3 7 425.1 319.48 HUMAN 1 -10.288 -18.6332 KTPYIVLSGSGKSMN-p O43290;S787-p KTPYIVLSGSGKSMN 0.229123145066835 0.0902486627118673 -0.207 -0.207 12.2966220970523 13.8204507201272 -0.207 -0.207 0.0589301830749877 0.0414910980048507 -2.38506027146888 -2.65844175224066 O43290 SART1 O43290.S787.p_SART1 O43290_S787s _1_1_787_787 O43290 O43290 U4/U6.U5 tri-snRNP-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20679.20679.3 10.47 10.47 2.373 4 1 1 0 553.9758 1579.946 S787s TMT10 781 (K) TPYIVLsGSGK (S) T(0.0)PY(0.0)IVLS(0.99)GS(0.0)GK K:TMT10,s:Phosphorylated S SART1 90424.4 4 7 2155.1 95.34 HUMAN 1 -12.2966 -13.8205 KTQCIPYSPKGEKRN-p Q9H5J8;S40-p KTQCIPYSPKGEKRN 0.131539706649705 0.773858246231187 -0.450666666666667 -0.0426666666666667 18.1970497257862 1.53996467600461 -0.450666666666667 -0.0426666666666667 0.0151458979887597 0.701461003835427 -3.50225465858363 -0.404285824188436 Q9H5J8 TAF1D Q9H5J8.S40.p_TAF1D Q9H5J8_S40s _1_1_40_40 Q9H5J8 Q9H5J8|E9PM59 TATA box-binding protein-associated factor RNA polymerase I subunit D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12928.12928.3 12.97 12.97 3.163 3 1 1 0 725.7207 2095.1825 S40s TMT10 34 (K) TQCIPYsPKGEK (R) T(0.0)QCIPY(0.0)S(0.99)PKGEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TAF1D 32171.4 3 1 3161.1 58.98 HUMAN 1 -18.197 -1.54 KTQEPAGSLEENNSD-p Q9NYV4-2;S1226-p KTQEPAGSLEENNSD 0.258161577951988 0.750848351930775 0.163666666666667 -0.036 11.1763995967806 1.72044897842736 0.163666666666667 -0.036 0.0762711053370137 0.672907086811181 2.18704228841936 -0.445913959490968 Q9NYV4 CDK12 Q9NYV4.2.S1226.p_CDK12 Q9NYV4-2_S1226s _1_1_1226_1226 Q9NYV4-2 Q9NYV4|Q9NYV4-2 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9638.9638.3 11.84 11.84 5.664 3 1 1 0 719.6754 2077.045 S1226s TMT10 1220 (K) TQEPAGsLEENNSDK (N) T(0.0)QEPAGS(0.99)LEENNS(0.0)DK K:TMT10,s:Phosphorylated S CDK12 163853.1 2 32 59.1 708.76 HUMAN 1 11.1764 -1.7204 KTQGYLESPKESSEP-p P17544-6;S413-p KTQGYLESPKESSEP 0.67705106710214 0.149684865013237 0.0593333333333333 0.223333333333333 3.17096192681395 10.8530780933176 0.0593333333333333 0.223333333333333 0.481841061944403 0.082166008603878 0.754927744719907 2.1294439788455 P17544 ATF7 P17544.6.S413.p_ATF7 P17544-6_S413s _1_1_413_413 P17544-6 P17544|P17544-6|P17544-3|P17544-2|P17544-4 Isoform 6 of Cyclic AMP-dependent transcription factor ATF-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11354.11354.3 12.2 9.13 9.129 3 1 1 0 640.027 1838.0991 S413s TMT10 406 (K) KTQGYLEsPK (E) KT(0.0)QGY(0.0)LES(0.99)PK K:TMT10,s:Phosphorylated S ATF7 52155.3 4 7 758.1 230.62 HUMAN 1 3.171 10.8531 KTQKGLFSDEEDSED-p A0A0A0MR88;S539-p KTQKGLFSDEEDSED 0.463664493555366 0.0389426425925667 0.0973333333333333 0.327 6.15734768478304 18.926282168269 0.0973333333333333 0.327 0.242250806469756 0.012804770033038 1.31254571656986 3.64903074300263 A0A0A0MR88 NotFound A0A0A0MR88.S539.p_NotFound A0A0A0MR88_S539s _1_1_539_539 A0A0A0MR88 Q9Y4E1|Q9Y4E1-2|Q9Y4E1-6|Q9Y4E1-3|J3KP36|Q9Y4E1-5|A0A0A0MR88|A0A096LPC5|Q9Y4E1-4 WASH complex subunit 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28542.28542.3 23.59 23.59 5.548 6 1 1 0 981.7897 2863.3886 S539s TMT10 536 (K) GLFsDEEDSEDLFSSQSASNLK (G) GLFS(0.99)DEEDS(0.0)EDLFS(0.0)S(0.0)QS(0.0)AS(0.0)NLK K:TMT10,s:Phosphorylated S WASHC2C 147223 4 6 12.99 1178.3 HUMAN 1 6.1573 18.9263 KTQPDVMSQNARKLI-p Q96Q15;S3556-p KTQPDVMSQNARKLI 0.741409981555911 0.138727652241899 -0.0823333333333334 0.186333333333333 2.46674318579515 11.3007528951393 -0.0823333333333334 0.186333333333333 0.566664076337414 0.0741181738516581 -0.609852745152187 2.20785799570647 Q96Q15 SMG1 Q96Q15.S3556.p_SMG1 Q96Q15_S3556s _1_1_3556_3556 Q96Q15 Q96Q15|Q96Q15-2|Q96Q15-3|Q96Q15-4 Serine/threonine-protein kinase SMG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7816.7816.2 11.19 8.77 7.386 2 1 1 0 778.3601 1475.7474 S3556s TMT10 3550 (K) TQPDVMsQNAR (K) T(0.0)QPDVMS(0.99)QNAR s:Phosphorylated S SMG1 414601.1 2 6 1337.1 152.31 HUMAN 1 -2.4667 11.3008 KTQPHHSTPTKGGWK-p Q12789;T514-p KTQPHHSTPTKGGWK 0.0623674166824533 0.00106093798192059 0.465333333333333 -1.40933333333333 26.206304587638 50.5095629814046 0.465333333333333 -1.40933333333333 0.00239535309578497 8.89290600223514e-06 5.35592892512006 -16.0419352150177 Q12789 GTF3C1 Q12789.T514.p_GTF3C1 Q12789_T514t _1_1_514_514 Q12789 Q12789|Q12789-3 General transcription factor 3C polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3084.3084.3 12.28 12.28 1.633 4 1 1 0 557.959 1591.8957 T514t TMT10 508 (K) TQPHHStPTK (G) T(0.0)QPHHS(0.0)T(0.99)PT(0.0)K K:TMT10,t:Phosphorylated T GTF3C1 241209.8 2 1 225.1 425.73 HUMAN 1 26.2063 -50.5096 KTQRRKNTHENIQLS-p Q6ZWT7;T474-p KTQRRKNTHENIQLS 0.173746120047528 0.00923219829203216 0.215 0.490666666666667 15.1361138368514 28.744757646655 0.215 0.490666666666667 0.0306470457257604 0.00133513209308801 2.90401863653665 6.0500544557175 Q6ZWT7 MBOAT2 Q6ZWT7.T474.p_MBOAT2 Q6ZWT7_T474t _1_1_474_474 Q6ZWT7 Q6ZWT7 Lysophospholipid acyltransferase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5869.5869.4 12.55 12.55 12.216 3 1 1 0 613.3427 2370.3821 T474t TMT10 471 (R) RKNtHENIQLSQSK (K) RKNT(0.99)HENIQLS(0.0)QS(0.0)K K:TMT10,t:Phosphorylated T MBOAT2 60267.4 4 1 3748.1 43.98 HUMAN 1 15.1361 28.7448 KTQRSRRSGGGAGSN-p Q15149-2;S42-p KTQRSRRSGGGAGSN 0.222871214848489 0.393921676965807 0.243333333333333 -0.0993333333333333 12.5429468947086 5.37868121508659 0.243333333333333 -0.0993333333333333 0.0556807800131519 0.289822353284718 2.4290252608587 -1.17277041875272 Q15149 PLEC Q15149.2.S42.p_PLEC Q15149-2_S42s _1_1_42_42 Q15149-2 Q15149-2|Q15149-3 Isoform 2 of Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10696.10696.3 15.72 12.36 3.827 3 1 1 0 613.9539 1759.8772 S42s TMT10 42 (R) sGGGAGSNGSVLDPAER (A) S(0.99)GGGAGS(0.0)NGS(0.0)VLDPAER s:Phosphorylated S PLEC 520403 6 54 44.2 794.85 HUMAN 1 12.5429 -5.3787 KTQTPPVSPAPQPTE-p Q14247;S405-p KTQTPPVSPAPQPTE 0.910037351231491 0.00834332988709938 0.0343333333333333 -0.511 0.803006224827881 29.5492541941913 0.0343333333333333 -0.511 0.831188216086414 0.00110936530813944 0.223707463989036 -6.28637910204818 Q14247 CTTN Q14247.S405.p_CTTN Q14247_S405s _1_1_405_405 Q14247 Q14247-2|Q14247-3 Src substrate cortactin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21469.21671.5 19.59 19.59 2.612 8 1 1 0 753.7824 3684.9161 S405s TMT10 399 (K) TQTPPVsPAPQPTEERLPSSPVYEDAASFK (A) T(0.0)QT(0.0)PPVS(0.99)PAPQPT(0.0)EERLPS(0.0)S(0.0)PVY(0.0)EDAAS(0.0)FK K:TMT10,s:Phosphorylated S CTTN 61756.2 2 10 493.1 293.68 HUMAN 1 0.803 -29.5493 KTRARQDSQGEEAEP-p A7MBM2;S1252-p KTRARQDSQGEEAEP 0.539805799310612 0.407094608151913 -0.091 0.124333333333333 4.94547019163914 5.19402126652385 -0.091 0.124333333333333 0.32022333840593 0.302411201278107 -1.09405568069477 1.13925965280857 A7MBM2 DISP2 A7MBM2.S1252.p_DISP2 A7MBM2_S1252s _1_1_1252_1252 A7MBM2 A7MBM2 Protein dispatched homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11225.11225.3 20.51 20.51 6.701 3 1 1 0 894.4169 2601.263 S1252s Hydrogen 1250 (R) QDsQGEEAEPLPASPEAPAHSPK (A) QDS(0.99)QGEEAEPLPAS(0.0)PEAPAHS(0.0)PK K:TMT10-Lys-Only,s:Phosphorylated S DISP2 154339.7 2 2 2793.1 70.42 HUMAN 1 -4.9455 5.194 KTRARVLSLDSGTVA-p Q96RV3;S692-p KTRARVLSLDSGTVA 0.659626370602384 0.158003983449351 -0.0643333333333333 -0.203333333333333 3.3872264399458 10.5414816324517 -0.0643333333333333 -0.203333333333333 0.458434565974267 0.0882778681606921 -0.798022378097585 -2.07507087492849 Q96RV3 PCNX Q96RV3.S692.p_PCNX Q96RV3_S692s _1_1_692_692 Q96RV3 Q96RV3|Q96RV3-3|Q96RV3-4|Q96RV3-2 Pecanex-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23075.23075.3 13.05 13.05 1.185 4 1 1 0 710.6758 2050.0436 S692s TMT10 690 (R) VLsLDSGTVACLNDSNR (L) VLS(0.99)LDS(0.0)GT(0.0)VACLNDS(0.0)NR C:Carbamidomethylation,s:Phosphorylated S PCNX1 261466.6 2 5 2604.1 76.97 HUMAN 1 -3.3872 -10.5415 KTRDKGQSFNDKRKK-p Q12959-2;S670-p KTRDKGQSFNDKRKK 0.714529762209892 0.0086777312522388 -0.0993333333333333 -0.711 2.75253039920342 29.2447408250545 -0.0993333333333333 -0.711 0.530575216654274 0.00118994233951171 -0.669684055932155 -6.19608800797791 Q12959 DLG1 Q12959.2.S670.p_DLG1 Q12959-2_S670s _1_1_670_670 Q12959-2 Q12959-2|Q12959-4 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7902.7902.3 10.18 6.82 99 1 1 1 0 602.6522 1725.9739 S670s TMT10 666 (R) DKGQsFNDK (R) DKGQS(1.0)FNDK K:TMT10,s:Phosphorylated S DLG1 103604.4 4 22 196.1 460.79 HUMAN 1 -2.7525 -29.2447 KTRQQNISMQRQENL-p E7ETA6;S977-p KTRQQNISMQRQENL 0.221798193479614 0.00917359434218356 0.184666666666667 -0.845666666666667 12.587089969235 28.8109841430682 0.184666666666667 -0.845666666666667 0.0551176893928527 0.00131492682638974 2.43692210183379 -6.06924134292278 E7ETA6 PCM1 E7ETA6.S977.p_PCM1 E7ETA6_S977s _1_1_977_977 E7ETA6 Q15154|E7ETA6|Q15154-2 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6246.6246.2 10.3 7.05 99 1 1 1 0 657.3154 1233.6571 S977s TMT10 973 (R) QQNIsMQR (Q) QQNIS(1.0)MQR s:Phosphorylated S PCM1 229381.8 2 30 13.1 1159.95 HUMAN 1 12.5871 -28.811 KTRRLSPSASPPRRR-p A9Z1X7;S386-p KTRRLSPSASPPRRR 0.255679520917314 0.302000807609395 0.180333333333333 0.1865 11.2564470895494 6.86440210157957 0.180333333333333 0.1865 0.0748781819330914 0.205854227301772 2.20109907561583 1.4368667228008 A9Z1X7 NotFound A9Z1X7.S386.p_NotFound A9Z1X7_S386sS388s_2_2_386_388 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11538.11745.2 7.03 7.03 1.774 3 2 2 0 650.7993 1140.6574 S386s S388s TMT10 383 (R) LSPsAsPPR (R) LS(0.0)PS(0.99)AS(0.99)PPR s:Phosphorylated S SRRM1 103445.7 6 54 8.1 1346.57 HUMAN 2 11.2564 6.8644 KTRVEANSPLPKNSG-p Q9H7C4;S26-p KTRVEANSPLPKNSG 0.09770772966914 0.309804184181098 -0.372333333333333 -0.0976666666666667 21.397096499871 6.72480439648426 -0.372333333333333 -0.0976666666666667 0.0072492044773667 0.212578608713552 -4.18540550803107 -1.41237541850207 Q9H7C4 SYNC Q9H7C4.S26.p_SYNC Q9H7C4_S26s _1_1_26_26 Q9H7C4 Q9H7C4|Q9H7C4-2 Syncoilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8970.8970.3 7.61 6.87 3.301 2 1 1 0 583.9955 1670.0001 S26s TMT10 20 (K) TRVEANsPLPK (N) T(0.0)RVEANS(0.99)PLPK K:TMT10,s:Phosphorylated S SYNC 55526.6 1 1 5514.1 18.63 HUMAN 1 -21.3971 -6.7248 KTSAKALYEQRKNYA-p Q12929;Y45-p KTSAKALYEQRKNYA 0.55663840787346 0.00703812571340336 -0.14 -0.489333333333333 4.69714083950904 30.8349183059204 -0.14 -0.489333333333333 0.33906730629198 0.000825103006144961 -1.0482533745463 -6.67924972570143 Q12929 EPS8 Q12929.Y45.p_EPS8 Q12929_Y45y _1_1_45_45 Q12929 Q12929|F5H0R8 Epidermal growth factor receptor kinase substrate 8 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8055.8055.3 9.92 3.3 99 1 1 1 0 482.6013 1365.8255 Y45y TMT10 43 (K) ALyEQRK (N) ALY(1.0)EQRK K:TMT10,y:Phosphorylated Y EPS8 92222.2 2 1 182.1 19.26 HUMAN 1 -4.6971 -30.8349 KTSARDASPTPSTDA-p O43639;S90-p KTSARDASPTPSTDA 0.853786146754816 0.301368477994011 -0.0266666666666667 0.137666666666667 1.33113945468902 6.87693890085255 -0.0266666666666667 0.137666666666667 0.736013964810233 0.205260843807362 -0.354995923954165 1.43906376053797 O43639 NCK2 O43639.S90.p_NCK2 O43639_S90s _1_1_90_90 O43639 O43639 Cytoplasmic protein NCK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28470.28470.5 14.72 14.72 1.18 7 1 1 0 733.1533 3581.7597 S90s Hydrogen 88 (R) DAsPTPSTDAEYPANGSGADRIYDLNIPAFVK (F) DAS(0.99)PT(0.0)PS(0.0)T(0.0)DAEY(0.0)PANGS(0.0)GADRIY(0.0)DLNIPAFVK K:TMT10-Lys-Only,s:Phosphorylated S NCK2 43142.5 11 1 2561.1 78.45 HUMAN 1 -1.3311 6.8769 KTSASTDSPWMGLAK-p G3V5N8;S494-p KTSASTDSPWMGLAK 0.400487551853052 0.0519341618050879 0.140666666666667 -0.324666666666667 7.33245151717651 17.142852367386 0.140666666666667 -0.324666666666667 0.184822503342312 0.0193069985186587 1.5190907261895 -3.28829194725279 G3V5N8 NotFound G3V5N8.S494.p_NotFound G3V5N8_S494s _1_1_494_494 G3V5N8 G3V5N8|Q9HBF4|Q9HBF4-3|Q9HBF4-2 Zinc finger FYVE domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22584.22584.3 11.65 11.65 2.306 5 1 1 0 663.9997 1910.0094 S494s TMT10 488 (K) TSASTDsPWMGLAK (Y) T(0.0)S(0.0)AS(0.0)T(0.0)DS(0.99)PWMGLAK K:TMT10,s:Phosphorylated S ZFYVE1 90818 1 3 3343.1 53.29 HUMAN 1 7.3325 -17.1429 KTSDIFGSPVTATSR-p Q9H910-3;S125-p KTSDIFGSPVTATSR 0.929515219349453 0.00785957634304923 -0.0203333333333333 -0.551 0.629645077603335 30.0174926367389 -0.0203333333333333 -0.551 0.865038610217648 0.000995980272361934 -0.178211689377093 -6.42725208032472 Q9H910 HN1L Q9H910.3.S125.p_HN1L Q9H910-3_S125s _1_1_125_125 Q9H910-3 Q9H910-3|A6NGP5|Q9H910-2 Isoform 3 of Jupiter microtubule associated homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17882.17882.3 17.64 17.64 4.816 6 1 1 0 583.2862 1667.8802 S125s TMT10 119 (K) TSDIFGsPVTATSR (L) T(0.0)S(0.0)DIFGS(0.99)PVT(0.0)AT(0.0)S(0.0)R s:Phosphorylated S JPT2 23082.3 4 7 1318.1 154.67 HUMAN 1 -0.6296 -30.0175 KTSFDQDSDVDIFPS-p Q02880;S1581-p KTSFDQDSDVDIFPS 0.286245644619298 0.0498576802914513 0.158 0.230666666666667 10.2510656108236 17.4134315063689 0.158 0.230666666666667 0.0943829264298985 0.0181408172952748 2.02536487922355 3.3418882626013 Q02880 TOP2B Q02880.S1581.p_TOP2B Q02880_S1581s _1_1_1581_1581 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.31563.32179.3 28 28 5.804 6 1 1 0 1040.1438 3038.4468 S1581s TMT10 1575 (K) TSFDQDsDVDIFPSDFPTEPPSLPR (T) T(0.0)S(0.0)FDQDS(0.99)DVDIFPS(0.0)DFPT(0.0)EPPS(0.0)LPR s:Phosphorylated S TOP2B 184233.7 23 47 71.1 658.36 HUMAN 1 10.2511 17.4134 KTSGAPGSPQTPPER-p Q96MH2;S29-p KTSGAPGSPQTPPER 0.64284448175569 0.351059470019555 0.0746666666666667 0.0906666666666667 3.58794524270988 6.02536711930489 0.0746666666666667 0.0906666666666667 0.437729156934508 0.24972572812203 0.837497200960559 1.28877348248569 Q96MH2 HEXIM2 Q96MH2.S29.p_HEXIM2 Q96MH2_S29s _1_1_29_29 Q96MH2 Q96MH2 Protein HEXIM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10168.10168.4 8.61 8.26 2.476 7 1 1 0 727.8607 2828.4489 S29s TMT10 23 (K) TSGAPGsPQTPPERHDSGGSLPLTPR (M) T(0.0)S(0.0)GAPGS(0.99)PQT(0.0)PPERHDS(0.0)GGS(0.0)LPLT(0.0)PR s:Phosphorylated S HEXIM2 32760.3 2 9 1285.1 158.28 HUMAN 1 3.5879 6.0254 KTSGSQDSQPSPLAL-p Q02446;S43-p KTSGSQDSQPSPLAL 0.389389394272965 0.0179881536355781 0.127 0.381666666666667 7.57583155571344 24.0311518669095 0.127 0.381666666666667 0.174749863196361 0.00395261772008208 1.56147964841026 4.79682188516569 Q02446 SP4 Q02446.S43.p_SP4 Q02446_S43sS46s_2_2_43_46 Q02446 Q02446 Transcription factor Sp4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31559.31559.3 7.09 7.09 1.116 7 2 2 0 913.1008 2577.3594 S43s S46s TMT10 37 (K) TSGSQDsQPsPLALLAATCSK (I) T(0.0)S(0.0)GS(0.0)QDS(0.99)QPS(0.99)PLALLAAT(0.0)CS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SP4 82611.1 1 7 1474.1 139.4 HUMAN 1 7.5758 24.0312 KTSILAVSDVSSSKP-p Q14966;S1385-p KTSILAVSDVSSSKP 0.357914508488374 0.579863297192307 0.150333333333333 -0.129 8.29448351548515 3.1934337019012 0.150333333333333 -0.129 0.148098837126963 0.479354302527279 1.68621088229112 -0.759323753185145 Q14966 ZNF638 Q14966.S1385.p_ZNF638 Q14966_S1385s _1_1_1385_1385 Q14966 Q14966 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21647.21647.4 16.23 16.23 4.236 7 1 1 0 622.3577 2406.4423 S1385s TMT10 1379 (K) TSILAVsDVSSSKPSIK (A) T(0.0)S(0.0)ILAVS(0.99)DVS(0.0)S(0.0)S(0.0)KPS(0.0)IK K:TMT10,s:Phosphorylated S ZNF638 222047.2 1 17 165.1 494.68 HUMAN 1 8.2945 -3.1934 KTSLKQASPVAFKKI-p P25929;S368-p KTSLKQASPVAFKKI 0.341280214844005 0.00123561176676881 0.169666666666667 1.234 8.67432343839832 47.5865396376381 0.169666666666667 1.234 0.135696190687794 1.74319525962224e-05 1.75198751290289 14.1329107333487 P25929 NPY1R P25929.S368.p_NPY1R P25929_S368s _1_1_368_368 P25929 P25929|B4DKL9 Neuropeptide Y receptor type 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12816.12816.3 11.85 11.85 99 1 1 1 0 581.6777 1663.051 S368s TMT10 366 (K) QAsPVAFKK (I) QAS(1.0)PVAFKK K:TMT10,s:Phosphorylated S NPY1R 45075.8 6 1 5199.1 21.85 HUMAN 1 8.6743 47.5865 KTSQLGDSPFYPGKT-p P49790-3;S257-p KTSQLGDSPFYPGKT 0.292579056536687 0.00595004777315755 0.155666666666667 -0.656333333333333 10.0707263860483 32.1404609521666 0.155666666666667 -0.656333333333333 0.0983846537203037 0.00061087718408505 1.99400077934072 -7.09841817265444 P49790 NUP153 P49790.3.S257.p_NUP153 P49790-3_S257s _1_1_257_257 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18104.18104.2 16.49 13.62 3.141 4 1 1 0 967.9883 1855.0002 S257s TMT10 251 (K) TSQLGDsPFYPGK (T) T(0.0)S(0.0)QLGDS(0.99)PFY(0.0)PGK K:TMT10,s:Phosphorylated S NUP153 158989.2 2 10 64.1 696.53 HUMAN 1 10.0707 -32.1405 KTSSRVNSTTKPEDG-p Q9Y4B6;S255-p KTSSRVNSTTKPEDG 0.698366744053494 0.00264930192085164 0.0743333333333333 -1.03633333333333 2.93058888642421 39.213198201688 0.0743333333333333 -1.03633333333333 0.509261812454427 0.00011986163012524 0.706278511436831 -9.78303746666639 Q9Y4B6 VPRBP Q9Y4B6.S255.p_VPRBP Q9Y4B6_S255s _1_1_255_255 Q9Y4B6 Q9Y4B6|Q9Y4B6-2 DDB1- and CUL4-associated factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11437.11437.3 11.85 11.85 1.129 3 1 1 0 705.0563 2033.1846 S255s TMT10 253 (R) VNsTTKPEDGGLK (K) VNS(0.99)T(0.0)T(0.0)KPEDGGLK K:TMT10,s:Phosphorylated S DCAF1 170772.9 3 2 1102.1 177.43 HUMAN 1 2.9306 -39.2132 KTSVMVNSFSQDLLM-p Q96SN8;S1389-p KTSVMVNSFSQDLLM 0.31642116084748 0.185833680754116 0.191333333333333 -0.322666666666667 9.35597785847266 9.61161859028959 0.191333333333333 -0.322666666666667 0.115985103441472 0.109354873105964 1.87000385799819 -1.91356681485236 Q96SN8 CDK5RAP2 Q96SN8.S1389.p_CDK5RAP2 Q96SN8_S1389s _1_1_1389_1389 Q96SN8 Q96SN8|Q96SN8-2|Q96SN8-3|Q96SN8-4|A0A0A0MRG9 CDK5 regulatory subunit-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30329.30329.4 29.23 29.23 2.307 4 1 1 0 697.3428 2706.3792 S1389s TMT10 1383 (K) TSVMVNsFSQDLLMEHIQEIR (T) T(0.0)S(0.0)VMVNS(0.99)FS(0.0)QDLLMEHIQEIR s:Phosphorylated S CDK5RAP2 216574.2 1 6 932.1 199.16 HUMAN 1 9.356 -9.6116 KTTATPLSPLKPPRM-p Q9H898;S121-p KTTATPLSPLKPPRM 0.613021669173245 0.00214566698827125 0.099 -0.902666666666667 3.94162517828892 41.466265985979 0.099 -0.902666666666667 0.40349437262743 7.13466196524504e-05 0.905954656809004 -10.8109371476569 Q9H898 ZMAT4 Q9H898.S121.p_ZMAT4 Q9H898_S121s _1_1_121_121 Q9H898 Q9H898 Zinc finger matrin-type protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15934.15934.3 10.31 10.31 2.219 4 1 1 0 639.7039 1837.1311 S121s TMT10 115 (K) TTATPLsPLKPPR (M) T(0.0)T(0.0)AT(0.0)PLS(0.99)PLKPPR K:TMT10,s:Phosphorylated S ZMAT4 26402.8 1 1 6656.1 10.31 HUMAN 1 3.9416 -41.4663 KTTPRQRSPLLNQPV-p Q9NPI6;S353-p KTTPRQRSPLLNQPV 0.159845829771225 0.159343046726412 0.262 0.232 15.9407006413408 10.4926073476588 0.262 0.232 0.0254641940908908 0.0892769336251063 3.05681244822421 2.0665559474695 Q9NPI6 DCP1A Q9NPI6.S353.p_DCP1A Q9NPI6_S353s_1_1_353_353 Q9NPI6 Q9NPI6|Q9NPI6-2 mRNA-decapping enzyme 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30899.30920.5 24.72 24.72 0.385 9 1 1 0 1112.6031 5478.0273 S353s N380n TMT10 351 (R) QRsPLLNQPVPELSHASLIANQSPFRAPLnVTNTAGTSLPSVDLLQK (L) QRS(0.99)PLLN(0.0)QPVPELS(0.0)HAS(0.0)LIAN(0.33)QS(0.0)PFRAPLN(0.33)VT(0.0)N(0.33)T(0.0)AGT(0.0)S(0.0)LPS(0.0)VDLLQK K:TMT10,s:Phosphorylated S,n:Deamidated DCP1A 63479.5 13 7 344.1 352.95 HUMAN 1 15.9407 10.4926 KTVDLGISDLEDDC_-p Q8NHQ9;S594-p KTVDLGISDLEDDC_ 0.421053324853859 0.506954929539413 0.244666666666667 0.077 6.92173545373385 3.95310170371799 0.244666666666667 0.077 0.203154503724285 0.40242951904999 1.44730634445005 0.908001816323748 Q8NHQ9 DDX55 Q8NHQ9.S594.p_DDX55 Q8NHQ9_S594s _1_1_594_594 Q8NHQ9 Q8NHQ9|F5H5U2|Q8NHQ9-2 ATP-dependent RNA helicase DDX55 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29629.29840.2 10.66 10.66 10.663 2 1 1 0 880.8783 1680.7836 S594s TMT10 588 (K) TVDLGIsDLEDDC (-) T(0.0)VDLGIS(0.99)DLEDDC C:Carbamidomethylation,s:Phosphorylated S DDX55 69116.1 1 3 1773.1 116.04 HUMAN 1 6.9217 3.9531 KTVKGGFSETRIEKR-p Q9H4G0;S820-p KTVKGGFSETRIEKR 0.36369110268551 0.0908089639720797 -0.135666666666667 -0.220333333333333 8.15477944787968 13.7816705267729 -0.135666666666667 -0.220333333333333 0.152940341367334 0.0418632505892783 -1.66200052323473 -2.6513591337861 Q9H4G0 EPB41L1 Q9H4G0.S820.p_EPB41L1 Q9H4G0_S820s _1_1_820_820 Q9H4G0 Q9H4G0|A0A0C4DH22|Q9H4G0-2|Q9H4G0-3|Q9H4G0-4 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12287.12287.3 9.02 3.75 2 2 1 1 0 554.6271 1581.9001 S820s TMT10 817 (K) GGFsETRIEK (R) GGFS(0.99)ET(0.0)RIEK K:TMT10,s:Phosphorylated S EPB41L1 99071.6 1 23 174.1 483.37 HUMAN 1 -8.1548 -13.7817 KTVKGGISETRIEKR-p O43491;S950-p KTVKGGISETRIEKR 0.0893916699807837 0.235370757113702 -0.333666666666667 -0.131666666666667 22.3329130360597 8.27339655245046 -0.333666666666667 -0.131666666666667 0.00584397966932815 0.148819672596799 -4.3984760346451 -1.68200490921937 O43491 EPB41L2 O43491.S950.p_EPB41L2 O43491_S950s _1_1_950_950 O43491 O43491|E9PHY5|A0A0A0MRA8|Q9Y2J2-4|Q9Y2J2-2|P11171 Band 4.1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10816.10816.3 7.49 3.87 5.555 2 1 1 0 543.2988 1547.9157 S950s TMT10 947 (K) GGIsETRIEK (R) GGIS(0.99)ET(0.0)RIEK K:TMT10,s:Phosphorylated S EPB41L2 113099.5 1 15 469.1 302.69 HUMAN 1 -22.3329 -8.2734 KTVPVNLSLNQDHLE-p Q6ISB3;S125-p KTVPVNLSLNQDHLE 0.714878784839761 0.800421840475123 -0.0856666666666667 0.0433333333333333 2.74773329185865 1.35211287764856 -0.0856666666666667 0.0433333333333334 0.53116160045351 0.732468094810749 -0.668691194893835 0.359973186319224 Q6ISB3 GRHL2 Q6ISB3.S125.p_GRHL2 Q6ISB3_S125s _1_1_125_125 Q6ISB3 Q6ISB3|Q6ISB3-2 Grainyhead-like protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17266.17266.4 13.95 13.95 6.554 3 1 1 0 651.3511 2522.4091 S125s TMT10 119 (K) TVPVNLsLNQDHLENSKR (E) T(0.0)VPVNLS(0.99)LNQDHLENS(0.0)KR K:TMT10,s:Phosphorylated S GRHL2 71446.2 1 4 651.1 254.16 HUMAN 1 -2.7477 1.3521 KTVRRAFSEGQITRR-p Q96GN5;S261-p KTVRRAFSEGQITRR 0.475290008488182 0.00313960863177787 -0.104666666666667 -0.668333333333333 5.94729128420151 37.5927645294979 -0.104666666666667 -0.668333333333333 0.254255801691146 0.000174069846782598 -1.27516826220911 -9.09958783849576 Q96GN5 CDCA7L Q96GN5.S261.p_CDCA7L Q96GN5_S261s _1_1_261_261 Q96GN5 Q96GN5|Q96GN5-2|Q96GN5-4|Q96GN5-5 Cell division cycle-associated 7-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10091.10091.3 8.31 4.88 8.314 2 1 1 0 491.9188 1393.7749 S261s TMT10 259 (R) AFsEGQITRR (M) AFS(0.99)EGQIT(0.0)RR s:Phosphorylated S CDCA7L 53118.2 1 4 3714.1 44.69 HUMAN 1 -5.9473 -37.5928 KTVSLTPSPTTQVET-p Q05209;S571-p KTVSLTPSPTTQVET 0.584245183878784 0.628060877826304 0.0743333333333333 -0.0516666666666666 4.29569626052564 2.7468203431062 0.0743333333333333 -0.0516666666666666 0.371903592831481 0.531273269911251 0.973246819210796 -0.668412827016285 Q05209 PTPN12 Q05209.S571.p_PTPN12 Q05209_S571s _1_1_571_571 Q05209 Q05209|Q05209-3|Q05209-2 Tyrosine-protein phosphatase non-receptor type 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23321.23321.4 26.5 26.5 1.104 9 1 1 0 934.2355 3653.9427 S571s TMT10 564 (R) KTVSLTPsPTTQVETPDLVDHDNTSPLFR (T) KT(0.0)VS(0.0)LT(0.0)PS(0.99)PT(0.0)T(0.0)QVET(0.0)PDLVDHDNT(0.0)S(0.0)PLFR K:TMT10,s:Phosphorylated S PTPN12 88960.6 4 9 644.1 254.82 HUMAN 1 4.2957 -2.7468 KTWNPKFTLRSHYDG-p Q9NRL3-3;T440-p KTWNPKFTLRSHYDG 0.586399571304479 0.0746527956064591 0.106333333333333 0.34 4.26459599496098 14.956120220095 0.106333333333333 0.34 0.37457639060815 0.0319439029683138 0.967381388495899 2.8683605158677 Q9NRL3 STRN4 Q9NRL3.3.T440.p_STRN4 Q9NRL3-3_T440t _1_1_440_440 Q9NRL3-3 O43815|Q9NRL3-3|O43815-2 Isoform 3 of Striatin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20516.20516.3 13.36 13.36 7.495 2 1 1 0 567.6484 1620.9626 T440t TMT10 434 (K) TWNPKFtLR (S) T(0.0)WNPKFT(0.99)LR K:TMT10,t:Phosphorylated T STRN4 82006 2 12 1137.1 173.35 HUMAN 1 4.2646 14.9561 KTYSTSFTPMYHAVT-p P00390;T448-p KTYSTSFTPMYHAVT 0.449736983689898 0.122123510582131 0.108333333333333 0.202 6.41186791886241 12.0449055903657 0.108333333333333 0.202 0.228461596907718 0.062446692518317 1.35761782623394 2.33912983838053 P00390 GSR P00390.T448.p_GSR P00390_T448t _1_1_448_448 P00390 P00390|P00390-3|P00390-2|P00390-4|P00390-5 Glutathione reductase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20392.20392.3 16.48 16.48 1.242 8 1 1 0 758.0445 2192.1462 T448t TMT10 442 (K) TYSTSFtPMYHAVTK (R) T(0.0)Y(0.0)S(0.0)T(0.0)S(0.0)FT(0.99)PMY(0.0)HAVT(0.0)K K:TMT10,t:Phosphorylated T GSR 56826.6 1 1 5763.1 16.48 HUMAN 1 6.4119 12.0449 KVAALAASPASVAVD-p O15119;S680-p KVAALAASPASVAVD 0.851062245218274 0.0657900421639967 0.037 -0.233666666666667 1.35530137658186 15.7253045754261 0.037 -0.233666666666667 0.731930529467847 0.0267589792299775 0.360771682770384 -3.01353759787014 O15119 TBX3 O15119.S680.p_TBX3 O15119_S680s _1_1_680_680 O15119 O15119|O15119-2 T-box transcription factor TBX3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21957.21957.3 13.44 13.44 1.121 5 1 1 0 794.4033 2301.2248 S680s TMT10 674 (K) VAALAAsPASVAVDSGSELNSR (S) VAALAAS(0.99)PAS(0.0)VAVDS(0.0)GS(0.0)ELNS(0.0)R s:Phosphorylated S TBX3 79786.8 1 6 1589.1 129.37 HUMAN 1 1.3553 -15.7253 KVADFGLSKVCAGLA-p Q8TDR2;S385-p KVADFGLSKVCAGLA 0.480335986339492 0.0057193778340584 0.134666666666667 0.659666666666667 5.86304814430706 32.4667505380923 0.134666666666667 0.659666666666667 0.25923592471801 0.000566663117016193 1.2601280849438 7.2065142183854 Q8TDR2 STK35 Q8TDR2.S385.p_STK35 Q8TDR2_S385s _1_1_385_385 Q8TDR2 Q8TDR2|Q8N165 Serine/threonine-protein kinase 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21640.21640.2 12.18 8.49 99 1 1 1 0 687.8767 1294.7771 S385s TMT10 379 (K) VADFGLsK (V) VADFGLS(1.0)K K:TMT10,s:Phosphorylated S STK35 58563.8 1 2 5027.1 23.75 HUMAN 1 5.863 32.4668 KVAEDLESEGLMAEE-p A0A0D9SGF6;S1159-p KVAEDLESEGLMAEE 0.630485430463348 0.551069830566264 0.12 0.103666666666667 3.72673503729746 3.48472007768236 0.12 0.103666666666667 0.423961574412771 0.448257941305019 0.864520551862783 0.817130494335604 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.S1159.p_SPTAN1 A0A0D9SGF6_S1159s _1_1_1159_1159 A0A0D9SGF6 A0A0D9SGF6|Q13813-2|A0A0D9SF54|Q13813-3 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.34405.34405.4 16.25 16.25 9.102 2 1 1 0 894.6635 3495.6643 S1159s TMT10 1153 (K) VAEDLEsEGLMAEEVQAVQQQEVYGMMPR (D) VAEDLES(0.99)EGLMAEEVQAVQQQEVY(0.0)GMMPR s:Phosphorylated S SPTAN1 288398.5 1 9 263.1 396.39 HUMAN 1 3.7267 3.4847 KVAGQDGSVVQFKIK-p A8MU27;S27-p KVAGQDGSVVQFKIK 0.567747259590119 0.199450188592621 0.0766666666666667 0.173333333333333 4.52558698198076 9.21093513147627 0.0766666666666667 0.173333333333333 0.352729109378557 0.119924105238928 1.0163543189044 1.84420257575806 A8MU27 NotFound A8MU27.S27.p_NotFound A8MU27_S27s _1_1_27_27 A8MU27 A8MU27|P55854-2|A8MUA9|P61956|Q6EEV6|P61956-2 Small ubiquitin-related modifier 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17505.17505.2 13.65 13.65 99 1 1 1 0 886.9709 1692.9685 S27s TMT10 21 (K) VAGQDGsVVQFK (I) VAGQDGS(1.0)VVQFK K:TMT10,s:Phosphorylated S SUMO3 17127.4 3 3 3254.1 55.79 HUMAN 1 4.5256 9.2109 KVALAAGSPARPPPA-p C9J069;S856-p KVALAAGSPARPPPA 0.275645808413021 0.119955486556661 0.187666666666667 0.185666666666667 10.5888269273121 12.1432463578127 0.187666666666667 0.185666666666667 0.0873207198505462 0.0610485515461069 2.08422179378885 2.35657614765722 C9J069 C9orf172 C9J069.S856.p_C9orf172 C9J069_S856s _1_1_856_856 C9J069 C9J069 Uncharacterized protein C9orf172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10649.10649.4 15.67 15.67 99 1 1 1 0 435.7435 1659.9856 S856s TMT10 850 (K) VALAAGsPARPPPAR (S) VALAAGS(1.0)PARPPPAR s:Phosphorylated S C9orf172 107960.6 5 14 430.1 316.49 HUMAN 1 10.5888 12.1432 KVASGVLSPPPAAPP-p Q8IXM2-2;S76-p KVASGVLSPPPAAPP 0.682621800394003 0.0074610163900706 -0.0573333333333333 -0.449333333333333 3.10753192661246 30.41960335098 -0.0573333333333333 -0.449333333333333 0.488930136908371 0.000907903446858647 -0.742169884948959 -6.55023744923683 Q8IXM2 C17orf49 Q8IXM2.2.S76.p_C17orf49 Q8IXM2-2_S76s _1_1_76_76 Q8IXM2-2 H0YIS7|Q8IXM2-3|F8W1H0|F8W038|Q8IXM2-2 Isoform 2 of Chromatin complexes subunit BAP18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24063.24063.3 16.42 16.42 2.323 6 1 1 0 1063.5714 3108.7345 S76s TMT10 70 (K) VASGVLsPPPAAPPPSSSSVPEAGGPPIK (K) VAS(0.0)GVLS(0.99)PPPAAPPPS(0.0)S(0.0)S(0.0)S(0.0)VPEAGGPPIK K:TMT10,s:Phosphorylated S BAP18 13957.6 3 4 617.1 261.02 HUMAN 1 -3.1075 -30.4196 KVAVLGASGGIGQPL-p P40926;S33-p KVAVLGASGGIGQPL 0.948131958402904 0.00577906652466547 -0.01 0.581 0.459134479693967 32.3632068171039 -0.01 0.581 0.899676863339483 0.000580335741146855 -0.132101800537769 7.1720633760052 P40926 MDH2 P40926.S33.p_MDH2 P40926_S33s _1_1_33_33 P40926 P40926|P40926-2 Malate dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.37206.37206.3 19.86 19.86 7.554 2 1 1 0 777.7975 2251.4154 S33s TMT10 27 (K) VAVLGAsGGIGQPLSLLLK (N) VAVLGAS(0.99)GGIGQPLS(0.0)LLLK K:TMT10,s:Phosphorylated S MDH2 35959.1 1 1 2175.1 94.5 HUMAN 1 -0.4591 32.3632 KVDLTLLSPKSENDK-p E7EVA0;S1679-p KVDLTLLSPKSENDK 0.0635370415880919 0.00379965736081285 -0.729333333333333 -0.673 25.9264103633252 35.8720796278396 -0.729333333333334 -0.673 0.00255481209581342 0.000258697384089634 -5.28229980463095 -8.42086383409433 E7EVA0 NotFound E7EVA0.S1679.p_NotFound E7EVA0_S1679s _1_1_1679_1679 E7EVA0 E7EVA0|P27816-4 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19775.19775.4 14.27 13.16 3.074 3 1 1 0 671.6426 2603.579 S1679s TMT10 1672 (K) KVDLTLLsPKSENDK (L) KVDLT(0.0)LLS(0.99)PKS(0.0)ENDK K:TMT10,s:Phosphorylated S MAP4 246695.2 3 26 38.1 865.62 HUMAN 1 -25.9264 -35.8721 KVDNQAKSPTTTQSP-p Q14669-3;S1078-p KVDNQAKSPTTTQSP 0.188550847178668 0.0143892568569838 -0.232333333333333 -0.442 14.2177410967477 25.5375259787786 -0.232333333333333 -0.442 0.0378639475900572 0.00279413510735721 -2.73298443063622 -5.1745762779749 Q14669 TRIP12 Q14669.3.S1078.p_TRIP12 Q14669-3_S1078s _1_1_1078_1078 Q14669-3 Q14669-3|Q14669-2|Q14669-4 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8750.8750.4 13.04 9.11 1.247 7 1 1 0 918.7349 3591.9425 S1078s TMT10 1063 (K) YSPPRDDDKVDNQAKsPTTTQSPK (S) Y(0.0)S(0.0)PPRDDDKVDNQAKS(0.99)PT(0.0)T(0.0)T(0.0)QS(0.0)PK K:TMT10,s:Phosphorylated S TRIP12 227456.1 4 13 234.1 420.47 HUMAN 1 -14.2177 -25.5375 KVEAIVISDEETDVS-p Q9H5J0;S362-p KVEAIVISDEETDVS 0.545021211681862 0.0333170160279246 -0.101333333333333 0.520666666666667 4.86613551093626 19.9154597412523 -0.101333333333333 0.520666666666667 0.326126769796525 0.0101965681413857 -1.07946868027814 3.85724064681443 Q9H5J0 ZBTB3 Q9H5J0.S362.p_ZBTB3 Q9H5J0_S362s _1_1_362_362 Q9H5J0 Q9H5J0 Zinc finger and BTB domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20602.20602.3 20.85 20.85 1.658 3 1 1 0 951.1066 2771.342 S362s TMT10 356 (K) VEAIVIsDEETDVSDEQPQGPER (A) VEAIVIS(0.99)DEET(0.0)DVS(0.0)DEQPQGPER s:Phosphorylated S ZBTB3 62396.7 2 3 1838.1 111.83 HUMAN 1 -4.8661 19.9155 KVEEKVGSPERPLSD-p O95251;S506-p KVEEKVGSPERPLSD 0.0991455987385871 0.697274652295287 -0.433333333333333 -0.0443333333333333 21.2230277003524 2.15257313857575 -0.433333333333333 -0.0443333333333333 0.00754565995726015 0.609175861485495 -4.14648098369936 -0.542266709737896 O95251 KAT7 O95251.S506.p_KAT7 O95251_S506s _1_1_506_506 O95251 O95251|O95251-4|O95251-2|O95251-5|O95251-3|E7EUP3 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24518.24518.3 14.76 8.85 6.097 4 1 1 0 723.3821 2088.1651 S506s TMT10 504 (K) VGsPERPLSDLGLISYR (S) VGS(0.99)PERPLS(0.0)DLGLIS(0.0)Y(0.0)R s:Phosphorylated S KAT7 71325.8 1 12 691.1 243.06 HUMAN 1 -21.223 -2.1526 KVEIRKLSDPPKAEA-p Q9NRG4;S283-p KVEIRKLSDPPKAEA 0.475290008488182 0.319313457105341 0.107 0.109666666666667 5.94725366884922 6.55699297834277 0.107 0.109666666666667 0.254258003875003 0.220953406793668 1.27516155323203 1.38286371032009 Q9NRG4 SMYD2 Q9NRG4.S283.p_SMYD2 Q9NRG4_S283s _1_1_283_283 Q9NRG4 Q9NRG4 N-lysine methyltransferase SMYD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16316.16316.4 11.21 4.79 99 1 1 1 0 649.1199 2513.4841 S283s TMT10 281 (R) KLsDPPKAEAIRDMVR (Y) KLS(1.0)DPPKAEAIRDMVR K:TMT10,s:Phosphorylated S SMYD2 50657.1 3 1 5394.1 19.75 HUMAN 1 5.9473 6.557 KVEKCGKSPIEKSGV-p Q8NG31;S837-p KVEKCGKSPIEKSGV 0.255652240485643 0.00104745705872082 0.346666666666667 -1.152 11.2606145010823 51.0713265137905 0.346666666666667 -1.152 0.0748063646427697 7.81389099798285e-06 2.20183124701563 -16.4361984640739 Q8NG31 CASC5 Q8NG31.S837.p_CASC5 Q8NG31_S837s _1_1_837_837 Q8NG31 Q8NG31|Q8NG31-2|Q8NG31-4|Q8NG31-3|E9PPJ1 Kinetochore scaffold 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8726.8726.2 7.2 7.2 99 1 1 1 0 843.4692 1605.9601 S837s TMT10 834 (K) CGKsPIEK (S) CGKS(1.0)PIEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KNL1 268353.4 1 7 650.1 254.2 HUMAN 1 11.2606 -51.0713 KVELQHISQKDCQED-p Q9UBU7;S381-p KVELQHISQKDCQED 0.186966364173873 0.00292586606990642 -0.419666666666667 -0.879666666666667 14.31419479958 38.2211155516058 -0.419666666666667 -0.879666666666667 0.0370322858466893 0.000150622012088486 -2.7507898800861 -9.35932807197217 Q9UBU7 DBF4 Q9UBU7.S381.p_DBF4 Q9UBU7_S381s _1_1_381_381 Q9UBU7 Q9UBU7 Protein DBF4 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12347.12347.5 22.53 22.53 9.299 3 1 1 0 706.1729 3446.8607 S381s TMT10 373 (K) EKVELQHIsQKDCQEDDTTVK (E) EKVELQHIS(0.99)QKDCQEDDT(0.0)T(0.0)VK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DBF4 77598.3 3 3 880.1 207.32 HUMAN 1 -14.3142 -38.2211 KVEMYSGSDDDDDFN-p O60841;S137-p KVEMYSGSDDDDDFN 0.438965780358395 0.0258237434974621 -0.161333333333333 0.395666666666667 6.58451450887498 21.5956096637305 -0.161333333333333 0.395666666666667 0.219557637552949 0.00692530704971683 -1.38807013730065 4.2257000860629 O60841 EIF5B O60841.S137.p_EIF5B O60841_S137s _1_1_137_137 O60841 O60841|A0A087WUT6 Eukaryotic translation initiation factor 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21290.21290.3 19.21 19.21 1.103 3 1 1 0 948.1229 2762.3798 S137s TMT10 131 (K) VEMYSGsDDDDDFNKLPK (K) VEMY(0.0)S(0.0)GS(0.99)DDDDDFNKLPK K:TMT10,s:Phosphorylated S EIF5B 139280.8 16 6 113.1 571.22 HUMAN 1 -6.5845 21.5956 KVEPPHSSHEDLTDG-p Q12767-2;S445-p KVEPPHSSHEDLTDG 0.118247488683981 0.0728003742761279 0.327333333333333 0.351 19.2874026823507 15.1175112500861 0.327333333333333 0.351 0.011783104566995 0.0307786009518158 3.72766072384233 2.89861003175488 Q12767 KIAA0195 Q12767.2.S445.p_KIAA0195 Q12767-2_S445s _1_1_445_445 Q12767-2 Q12767-2|C9JL75|J3QQW3 Isoform 2 of Transmembrane protein 94 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11554.11554.3 13.36 13.36 1.161 5 1 1 0 762.6918 2206.0938 S445s TMT10 439 (K) VEPPHSsHEDLTDGLSTR (S) VEPPHS(0.0)S(0.99)HEDLT(0.0)DGLS(0.0)T(0.0)R s:Phosphorylated S TMEM94 156822 4 4 1431.1 142.91 HUMAN 1 19.2874 15.1175 KVEPSSQSPGRSPRL-p X6RLX0;S17-p KVEPSSQSPGRSPRL 0.765963295929894 0.13032935875322 0.058 -0.235 2.22285524306723 11.6639271273516 0.058 -0.235 0.5993968768 0.0681721965195899 0.557608242698644 -2.27176618587518 X6RLX0 ERC1 X6RLX0.S17.p_ERC1 X6RLX0_S17s _1_1_17_17 X6RLX0 X6RLX0|Q8IUD2|Q8IUD2-3|G8JLD3|Q8IUD2-2|X6RM00 ELKS/Rab6-interacting/CAST family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6225.6225.4 14.81 14.81 2.188 5 1 1 0 574.0577 2213.2403 S17s TMT10 7 (R) SVGKVEPSSQsPGRSPR (L) S(0.0)VGKVEPS(0.0)S(0.0)QS(0.99)PGRS(0.0)PR K:TMT10,s:Phosphorylated S ERC1 128700.8 5 2 904.1 203.11 HUMAN 1 2.2229 -11.6639 KVERVPKSPEHSAEP-p Q9ULH0-4;S1536-p KVERVPKSPEHSAEP 0.233628206047255 0.0111969211786443 -0.316 -0.794666666666667 12.1038093400851 27.3186313729039 -0.316 -0.794666666666667 0.06160544031797 0.00185411583377692 -2.35076108194988 -5.64809975764738 Q9ULH0 KIDINS220 Q9ULH0.4.S1536.p_KIDINS220 Q9ULH0-4_S1536s _1_1_1536_1536 Q9ULH0-4 Q9ULH0|Q9ULH0-4|Q9ULH0-2|Q9ULH0-5 Isoform 4 of Kinase D-interacting substrate of 220 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7798.7798.3 13.24 7.82 2.345 2 1 1 0 662.3582 1905.0958 S1536s TMT10 1533 (R) VPKsPEHSAEPIR (T) VPKS(0.99)PEHS(0.0)AEPIR K:TMT10,s:Phosphorylated S KIDINS220 196163.1 4 14 306.1 373.6 HUMAN 1 -12.1038 -27.3186 KVESKGNSPPSSGEA-p P41227;S186-p KVESKGNSPPSSGEA 0.441093698809202 0.119323159160127 -0.123 0.165666666666667 6.54515811640039 12.1762386264482 -0.123 0.165666666666667 0.221556343139392 0.0605865380484388 -1.38113626440805 2.36243475940355 P41227 NAA10 P41227.S186.p_NAA10 P41227_S186s _1_1_186_186 P41227 P41227|P41227-2 N-alpha-acetyltransferase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6261.6261.3 13.92 6.61 2.054 4 1 1 0 939.1353 2735.4237 S186s TMT10 180 (K) VESKGNsPPSSGEACREEK (G) VES(0.0)KGNS(0.99)PPS(0.0)S(0.0)GEACREEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NAA10 26629.2 7 2 1452.1 140.76 HUMAN 1 -6.5452 12.1762 KVEVAHISGGE____-p O95625;S1050-p KVEVAHISGGE____ 0.265757623829638 0.0402427972482645 0.231666666666667 -0.292 10.9078566420297 18.7111570942187 0.231666666666667 -0.292 0.0811361387332746 0.0134550182318264 2.13997428021381 -3.60454820274272 O95625 ZBTB11 O95625.S1050.p_ZBTB11 O95625_S1050s _1_1_1050_1050 O95625 O95625 Zinc finger and BTB domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36574.36574.4 19.07 19.07 1.471 3 1 1 0 701.8765 2724.5184 S1050s TMT10 1032 (K) LSEVAEAIQTVKVEVAHIsGGE (-) LS(0.0)EVAEAIQT(0.0)VKVEVAHIS(0.99)GGE K:TMT10,s:Phosphorylated S ZBTB11 121492.5 2 2 3195.1 57.98 HUMAN 1 10.9079 -18.7112 KVEVNTNSGEIIHKK-p Q8WWQ0;S1651-p KVEVNTNSGEIIHKK 0.188778224113783 0.0411666586422121 0.456333333333333 -0.45 14.1856575877687 18.5711567779407 0.456333333333333 -0.45 0.0381447033035666 0.0138958245556196 2.72706964409998 -3.5757477876408 Q8WWQ0 PHIP Q8WWQ0.S1651.p_PHIP Q8WWQ0_S1651s _1_1_1651_1651 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13357.13357.4 11.52 11.52 1.112 2 1 1 0 584.5809 2255.3326 S1651s TMT10 1645 (K) VEVNTNsGEIIHKK (R) VEVNT(0.0)NS(0.99)GEIIHKK K:TMT10,s:Phosphorylated S PHIP 208454.1 1 23 108.1 577.05 HUMAN 1 14.1857 -18.5712 KVFERMNSLTFKKSK-p Q96N67-6;S1383-p KVFERMNSLTFKKSK 0.193104490434051 0.0465614282837305 -0.243 0.249333333333333 13.9444506259868 17.8186221179263 -0.239198114291112 0.249333333333333 0.040323195126943 0.0165248599776792 -2.68272518436471 3.42288381636719 Q96N67 DOCK7 Q96N67.6.S1383.p_DOCK7 Q96N67-6_S1383s _1_1_1383_1383 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17393.17393.2 11.63 11.63 2.162 2 1 1 0 868.4927 1656.0122 S1383s TMT10 1381 (R) MNsLTFKK (S) MNS(0.99)LT(0.0)FKK K:TMT10,s:Phosphorylated S DOCK7 243551.1 4 18 345.1 352.4 HUMAN 1 -13.9445 17.8186 KVFVGGLSPDTSEEQ-p O14979;S241-p KVFVGGLSPDTSEEQ 0.379701721131272 0.050124945718593 0.138 0.238666666666667 7.76902732456352 17.3715367162929 0.138 0.238666666666667 0.16714649250365 0.0183166618725938 1.59506568574749 3.33356434443587 O14979 HNRNPDL O14979.S241.p_HNRNPDL O14979_S241s _1_1_241_241 O14979 O14979|A0A087WUK2|O14979-2|O14979-3 Heterogeneous nuclear ribonucleoprotein D-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21294.21294.3 17.88 17.88 2.351 3 1 1 0 867.8104 2521.4481 S241s TMT10 234 (K) KVFVGGLsPDTSEEQIK (E) KVFVGGLS(0.99)PDT(0.0)S(0.0)EEQIK K:TMT10,s:Phosphorylated S HNRNPDL 46607.8 9 3 3171.1 58.75 HUMAN 1 7.769 17.3715 KVGDGDLSAEEIPEN-p Q14684;S245-p KVGDGDLSAEEIPEN 0.852872919348793 0.0635928265391406 -0.0266666666666667 -0.232 1.33850288691895 15.9338570973581 -0.0266666666666667 -0.232 0.734767115648215 0.025504351798148 -0.356758049019777 -3.05335398702679 Q14684 RRP1B Q14684.S245.p_RRP1B Q14684_S245s _1_1_245_245 Q14684 Q14684|Q14684-2 Ribosomal RNA processing protein 1 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21653.21653.3 19.77 15.06 9.228 2 1 1 0 780.0401 2258.135 S245s TMT10 239 (K) VGDGDLsAEEIPENEVSLR (R) VGDGDLS(0.99)AEEIPENEVS(0.0)LR s:Phosphorylated S RRP1B 84825.4 8 1 473.1 301.95 HUMAN 1 -1.3385 -15.9339 KVGGLDFSPVQTSQG-p Q08050-3;S676-p KVGGLDFSPVQTSQG 0.74023978904261 0.665488739242255 0.0586666666666667 0.0483333333333333 2.47757754714688 2.42086455264436 0.0586666666666667 0.0483333333333334 0.56525217912454 0.572682015483431 0.612147287855761 0.600036898615049 Q08050 FOXM1 Q08050.3.S676.p_FOXM1 Q08050-3_S676s _1_1_676_676 Q08050-3 Q08050-3|Q08050-2|A0A0D9SFF0 Isoform 4 of Forkhead box protein M1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37582.37582.4 28.96 24.11 1.175 9 1 1 0 1207.1058 4745.4181 S676s TMT10 670 (K) VGGLDFsPVQTSQGASDPLPDPLGLMDLSTTPLQSAPPLESPQR (L) VGGLDFS(0.99)PVQT(0.0)S(0.0)QGAS(0.0)DPLPDPLGLMDLS(0.0)T(0.0)T(0.0)PLQS(0.0)APPLES(0.0)PQR s:Phosphorylated S FOXM1 89107.7 2 6 1076.1 180.52 HUMAN 1 2.4776 2.4209 KVGLGLGYLELPQIN-p Q13045;Y737-p KVGLGLGYLELPQIN 0.213828262788221 0.296428002793341 0.214333333333333 0.229666666666667 12.9135918605194 6.97188746315706 0.214333333333333 0.229666666666667 0.0511258820731158 0.200821984163835 2.49550823612833 1.45569080446461 Q13045 FLII Q13045.Y737.p_FLII Q13045_Y737y _1_1_737_737 Q13045 Q13045|Q13045-3|Q13045-2 Protein flightless-1 homolog GG20160819_MSz_CCLE_T4D7_pY_Injection_01.42611.42611.3 10.81 10.81 8.732 2 1 1 0 772.4379 2235.3153 Y737y TMT10 731 (K) VGLGLGyLELPQINYK (L) VGLGLGY(0.99)LELPQINY(0.0)K K:TMT10,y:Phosphorylated Y FLII 146231.9 2 1 324.1 10.81 HUMAN 1 12.9136 6.9719 KVGVLAASMEAKASS-p Q9UHB6-4;S508-p KVGVLAASMEAKASS 0.76632795784538 0.761351598926122 -0.0416666666666667 0.0396666666666667 2.21697706463444 1.63732654020343 -0.0416666666666667 0.0396666666666667 0.60020871011889 0.685910333911219 -0.556334478349972 0.426851912873958 Q9UHB6 LIMA1 Q9UHB6.4.S508.p_LIMA1 Q9UHB6-4_S508s _1_1_508_508 Q9UHB6-4 Q9UHB6-4|Q9UHB6-5|Q9UHB6-2|F8VQE1|Q9UHB6-3|F8VS07 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20193.20193.2 15.94 10.22 99 1 1 1 0 807.4414 1533.9075 S508s TMT10 502 (K) VGVLAAsMEAK (A) VGVLAAS(1.0)MEAK K:TMT10,s:Phosphorylated S LIMA1 85678.4 3 21 42.1 822.82 HUMAN 1 -2.217 1.6373 KVHNDAQSFDYDHDA-p O43852-3;S52-p KVHNDAQSFDYDHDA 0.210578226562875 0.0200527645560937 -0.443333333333333 0.478333333333333 13.060203517523 23.2666675467556 -0.443333333333333 0.478333333333333 0.0494287523319399 0.00471338858099868 -2.52192095535304 4.61250828354993 O43852 CALU O43852.3.S52.p_CALU O43852-3_S52sY55y_2_2_52_55 O43852-3 O43852-3|O43852-4|O43852-2|O43852-6 Isoform 3 of Calumenin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19530.19530.3 11.18 11.18 99 2 2 2 0 1033.4459 2937.4055 N48n S52s Y55y TMT10 46 (K) VHnDAQsFDyDHDAFLGAEEAK (T) VHN(1.0)DAQS(1.0)FDY(1.0)DHDAFLGAEEAK K:TMT10,n:Deamidated,s:Phosphorylated S,y:Phosphorylated Y CALU 38164.4 1 2 3755.1 43.83 HUMAN 1 -13.0602 23.2667 KVHPYEDSDSSEDEV-p O14730;S125-p KVHPYEDSDSSEDEV 0.391198751974399 0.540672700464305 -0.130333333333333 0.058 7.51963189091796 3.59216710627584 -0.130333333333333 0.058 0.177025899955126 0.437303838425393 -1.55169985031251 0.838190781692214 O14730 RIOK3 O14730.S125.p_RIOK3 O14730_S125sS127sS128s_3_3_125_128 O14730 O14730|O14730-2|B4E1Q4 Serine/threonine-protein kinase RIO3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18166.18390.5 17.07 17.07 3.039 7 3 3 0 980.4446 4658.289 S125s S127s S128s TMT10 119 (K) VHPYEDsDssEDEVDWQDTRDDPYRPAKPVPTPK (K) VHPY(0.0)EDS(0.99)DS(0.99)S(0.99)EDEVDWQDT(0.0)RDDPY(0.0)RPAKPVPT(0.0)PK K:TMT10,s:Phosphorylated S RIOK3 59548.4 6 5 3155.1 59.09 HUMAN 1 -7.5196 3.5922 KVIGTFRSPHGQTRP-p Q9H8V3;S716-p KVIGTFRSPHGQTRP 0.117289050573617 0.00839507320642349 -0.317333333333333 -0.625 19.3661244589282 29.5091697576355 -0.317333333333333 -0.625 0.011571443898322 0.0011196519072775 -3.74421505129507 -6.27443454698013 Q9H8V3 ECT2 Q9H8V3.S716.p_ECT2 Q9H8V3_S716s _1_1_716_716 Q9H8V3 Q9H8V3-3|Q9H8V3-4|Q9H8V3-2 Protein ECT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12569.12569.5 17.45 14.91 1.164 4 1 1 0 518.2911 2507.4611 S716s TMT10 710 (K) VIGTFRsPHGQTRPPASLK (H) VIGT(0.0)FRS(0.99)PHGQT(0.0)RPPAS(0.0)LK K:TMT10,s:Phosphorylated S ECT2 104530 3 12 572.1 269.2 HUMAN 1 -19.3661 -29.5092 KVIPEDASESEEKLD-p Q9H2P0;S921-p KVIPEDASESEEKLD 0.138584162025709 0.0124265846059279 -0.401666666666667 0.436666666666667 17.5777704185877 26.5932541418218 -0.401666666666667 0.436666666666667 0.0174671865336165 0.00219116249552112 -3.37731257049021 5.45157404752521 Q9H2P0 ADNP Q9H2P0.S921.p_ADNP Q9H2P0_S921s _1_1_921_921 Q9H2P0 Q9H2P0 Activity-dependent neuroprotector homeobox protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18272.18272.4 18.42 18.42 2.665 2 1 1 0 646.8399 2504.3699 S921s TMT10 915 (K) VIPEDAsESEEKLDQK (E) VIPEDAS(0.99)ES(0.0)EEKLDQK K:TMT10,s:Phosphorylated S ADNP 124930 8 11 276.1 391.38 HUMAN 1 -17.5778 26.5933 KVIPKVPSKNQNDPL-p O75534;S276-p KVIPKVPSKNQNDPL 0.256804968269553 0.0165481147638236 0.335 -0.657666666666667 11.2139866954324 24.6016024288291 0.335 -0.657666666666667 0.0756138463496738 0.00346608937560133 2.19364120722831 -4.93754240136598 O75534 CSDE1 O75534.S276.p_CSDE1 O75534_S276s _1_1_276_276 O75534 O75534-4|O75534-3|O75534-2|E9PLT0 Cold shock domain-containing protein E1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16637.16637.4 10.93 7.78 99 1 1 1 0 657.3815 2546.5386 S276s TMT10 270 (K) VIPKVPsKNQNDPLPGR (I) VIPKVPS(1.0)KNQNDPLPGR K:TMT10,s:Phosphorylated S CSDE1 89738.9 4 3 1077.1 180.35 HUMAN 1 11.214 -24.6016 KVIQAEGSNSSMLAE-p Q86V48;S57-p KVIQAEGSNSSMLAE 0.41751649911322 0.932946832445535 -0.123 0.0136666666666667 7.00272476287659 0.425361235769663 -0.123 0.0136666666666667 0.199401088033138 0.906700544263206 -1.46149015927374 0.122784618771136 Q86V48 LUZP1 Q86V48.S57.p_LUZP1 Q86V48_S57s _1_1_57_57 Q86V48 Q86V48|Q86V48-3|Q86V48-2 Leucine zipper protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31016.31016.2 11.53 11.53 1.138 3 1 1 0 1178.0964 2275.2165 S57s TMT10 51 (K) VIQAEGsNSSMLAEIEVLR (Q) VIQAEGS(0.99)NS(0.0)S(0.0)MLAEIEVLR s:Phosphorylated S LUZP1 120843.3 6 2 507.1 289.34 HUMAN 1 -7.0027 0.4254 KVIVGSLSVQDLQAS-p Q15043;S311-p KVIVGSLSVQDLQAS 0.662100665140048 0.0327937630934412 -0.059 -0.344333333333333 3.35488238992614 20.0257450535125 -0.059 -0.344333333333333 0.461861499267966 0.00994089518384558 -0.791615547984602 -3.88084028218337 Q15043 SLC39A14 Q15043.S311.p_SLC39A14 Q15043_S311s _1_1_311_311 Q15043 Q15043|Q15043-3|Q15043-2 Zinc transporter ZIP14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33632.34350.3 18.43 18.43 2.426 5 1 1 0 997.5211 2910.5799 S311s TMT10 305 (K) VIVGSLsVQDLQASQSACYWLK (G) VIVGS(0.0)LS(0.99)VQDLQAS(0.0)QS(0.0)ACY(0.0)WLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLC39A14 54953 5 1 5533.1 18.43 HUMAN 1 -3.3549 -20.0257 KVIYSQPSARSEGEF-p Q9Y624;S284-p KVIYSQPSARSEGEF 0.117289050573617 0.0442350267295786 -0.436666666666667 -0.461333333333333 19.3650685016783 18.1354306236489 -0.436666666666667 -0.461333333333333 0.0115742577576232 0.0153623246101932 -3.74399273789112 -3.48684414442934 Q9Y624 F11R Q9Y624.S284.p_F11R Q9Y624_S284s _1_1_284_284 Q9Y624 Q9Y624|A0A087WY82|Q9Y624-2 Junctional adhesion molecule A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15250.15250.3 15.46 11.87 1.401 4 1 1 0 746.0526 2156.1752 S284s TMT10 278 (K) VIYSQPsARSEGEFK (Q) VIY(0.0)S(0.0)QPS(0.99)ARS(0.0)EGEFK K:TMT10,s:Phosphorylated S F11R 32981.9 16 1 2495.1 81.23 HUMAN 1 -19.3651 -18.1354 KVKANKHSPHLSRLQ-p O75146;S929-p KVKANKHSPHLSRLQ 0.771638354290043 0.160822297671947 -0.0533333333333333 0.144333333333333 2.15601669251 10.4385617623502 -0.0533333333333334 0.144333333333333 0.608693032762448 0.0903948781674768 -0.54308239421105 2.05714405974326 O75146 HIP1R O75146.S929.p_HIP1R O75146_S929s _1_1_929_929 O75146 O75146 Huntingtin-interacting protein 1-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3294.3294.4 14.36 5.7 6.926 2 1 1 0 421.9817 1604.9385 S929s TMT10 925 (K) ANKHsPHLSR (L) ANKHS(0.99)PHLS(0.0)R K:TMT10,s:Phosphorylated S HIP1R 120070.8 1 4 2470.1 82.04 HUMAN 1 -2.156 10.4386 KVKASPITNDGEDEF-p Q02880;T1403-p KVKASPITNDGEDEF 0.223892436900245 0.392694926992948 -0.299666666666667 -0.132 12.4856617478377 5.39542180416681 -0.299666666666667 -0.132 0.056420096576147 0.288707336146216 -2.41878568494332 -1.17579907356023 Q02880 TOP2B Q02880.T1403.p_TOP2B Q02880_S1400sT1403tS1413s_3_3_1400_1413 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26604.26604.5 10.07 10.07 1.588 6 3 3 0 903.631 4274.2162 S1400s T1403t S1413s TMT10 1397 (K) VKAsPItNDGEDEFVPsDGLDKDEYTFSPGK (S) VKAS(0.99)PIT(0.99)NDGEDEFVPS(0.99)DGLDKDEY(0.0)T(0.0)FS(0.0)PGK K:TMT10,s:Phosphorylated S,t:Phosphorylated T TOP2B 184233.7 8 59 71.1 658.36 HUMAN 1 -12.4857 -5.3954 KVKDEPDSPPVALGM-p Q12772;S469-p KVKDEPDSPPVALGM 0.199418709267342 0.0196425829372408 -0.206 -0.374666666666667 13.617974321287 23.4293122645104 -0.206 -0.374666666666667 0.0434712939944144 0.00454013507151505 -2.62304162225656 -4.65132051064355 Q12772 SREBF2 Q12772.S469.p_SREBF2 Q12772_S469s _1_1_469_469 Q12772 Q12772|G3V0I8 Sterol regulatory element-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19602.19602.3 13.68 13.68 99 1 1 1 0 788.4107 2283.2419 S469s TMT10 463 (K) VKDEPDsPPVALGMVDR (S) VKDEPDS(1.0)PPVALGMVDR K:TMT10,s:Phosphorylated S SREBF2 124997.6 1 3 2620.1 76.57 HUMAN 1 -13.618 -23.4293 KVKEKVRSPKEPETP-p Q12934;S454-p KVKEKVRSPKEPETP 0.113128338411947 0.0368850339996155 -0.292333333333333 -0.336 19.7487890610711 19.2739478412785 -0.292333333333333 -0.336 0.010595491170064 0.011819666311417 -3.82524400967619 -3.72151305142428 Q12934 BFSP1 Q12934.S454.p_BFSP1 Q12934_S454s _1_1_454_454 Q12934 Q12934|Q12934-2|Q12934-3 Filensin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13746.13746.4 12.23 12.23 3.735 5 1 1 0 661.366 2562.4746 S454s TMT10 452 (K) VRsPKEPETPTELYTK (E) VRS(0.99)PKEPET(0.0)PT(0.0)ELY(0.0)T(0.0)K K:TMT10,s:Phosphorylated S BFSP1 74828.2 1 1 6344.1 12.23 HUMAN 1 -19.7488 -19.2739 KVKKGKNSIDASEEK-p A0A0B4J1V9;S115-p KVKKGKNSIDASEEK 0.22202506952008 0.00423666321237395 -0.214333333333333 -1.38533333333333 12.5795903901074 34.8974372755315 -0.214333333333333 -1.38533333333333 0.0552129511562242 0.000323784662374119 -2.43558009340401 -8.05653259986795 A0A0B4J1V9 HELLS A0A0B4J1V9.S115.p_HELLS A0A0B4J1V9_S115s _1_1_115_115 A0A0B4J1V9 A0A0B4J1V9|Q9NRZ9|Q9NRZ9-2|Q9NRZ9-3|Q9NRZ9-4|Q9NRZ9-5|Q9NRZ9-6|Q9NRZ9-7|Q9NRZ9-8 Helicase, lymphoid-specific, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10327.10327.3 8.83 8.83 8.826 2 1 1 0 810.0986 2348.3211 S115s TMT10 112 (K) GKNsIDASEEKPVMR (K) GKNS(0.99)IDAS(0.0)EEKPVMR K:TMT10,s:Phosphorylated S HELLS 103341.1 1 1 2348.1 87.11 HUMAN 1 -12.5796 -34.8974 KVKMPKFSMPGFKGE-p Q09666;S3611-p KVKMPKFSMPGFKGE 0.251704693334651 0.0637634267889822 0.211666666666667 0.236 11.4301593606864 15.9161918199162 0.211666666666667 0.236 0.0719422578916388 0.0256083040747131 2.23164882896522 3.04997359931323 Q09666 AHNAK Q09666.S3611.p_AHNAK Q09666_S3611s _1_1_3611_3611 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29070.29070.4 15.88 10.44 4.634 2 1 1 0 701.3735 2722.5093 S3611s TMT10 3610 (K) FsMPGFKGEGPEVDVTLPK (A) FS(0.99)MPGFKGEGPEVDVT(0.0)LPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 89 1.1 4313.36 HUMAN 1 11.4302 15.9162 KVKQEPGTEDEICSF-p Q9UPN9;T781-p KVKQEPGTEDEICSF 0.861185379223848 0.0264465540508986 0.0283333333333333 -0.391 1.26776847603984 21.4205900589138 0.0265173123246205 -0.391 0.74683240277535 0.00721009511787576 0.339759331384448 -4.18639831049475 Q9UPN9 TRIM33 Q9UPN9.T781.p_TRIM33 Q9UPN9_T781t _1_1_781_781 Q9UPN9 Q9UPN9|Q9UPN9-2 E3 ubiquitin-protein ligase TRIM33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15782.15782.4 16.64 15.42 5.984 3 1 1 0 862.9528 3368.8178 T781t TMT10 775 (K) VKQEPGtEDEICSFSGGVKQEK (T) VKQEPGT(0.99)EDEICS(0.0)FS(0.0)GGVKQEK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T TRIM33 124699.1 1 4 1379.1 148.46 HUMAN 1 1.2678 -21.4206 KVKVAQRSPVDSGTI-p P49454;S3150-p KVKVAQRSPVDSGTI 0.176527526104725 0.00209694905349103 -0.212 -0.825 14.9383616009972 41.6965692287392 -0.212 -0.825 0.0320747913482924 6.76617267798504e-05 -2.86689881356876 -10.9214124488317 P49454 CENPF P49454.S3150.p_CENPF P49454_S3150s _1_1_3150_3150 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13233.13233.5 18.32 18.32 3.51 5 1 1 0 519.4882 2513.4452 S3150s TMT10 3146 (K) VAQRsPVDSGTILREPTTK (S) VAQRS(0.99)PVDS(0.0)GT(0.0)ILREPT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S CENPF 371067.2 10 33 47.1 771.73 HUMAN 1 -14.9384 -41.6966 KVLASSLSPFREGRF-p Q9C0I3;S448-p KVLASSLSPFREGRF 0.915262614364166 0.0131822884002457 -0.0223333333333333 -0.64 0.752957381952884 26.1795591113247 -0.0223333333333334 -0.64 0.840822378261218 0.00241015009077413 -0.210708242300508 -5.34178034981293 Q9C0I3 CCSER1 Q9C0I3.S448.p_CCSER1 Q9C0I3_S448s _1_1_448_448 Q9C0I3 Q9C0I3|Q9C0I3-2|E7EUW0 Serine-rich coiled-coil domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19347.19347.3 10.47 10.47 1.352 3 1 1 0 576.6398 1647.938 S448s TMT10 442 (K) VLASSLsPFREGR (F) VLAS(0.0)S(0.0)LS(0.99)PFREGR s:Phosphorylated S CCSER1 100307.3 2 5 1823.1 112.62 HUMAN 1 -0.753 -26.1796 KVLDEEGSEREFDED-p O43719;S616-p KVLDEEGSEREFDED 0.25414491835742 0.00227464949884667 -0.727666666666667 1.00166666666667 11.3328288233536 40.8286294060331 -0.727666666666667 1.00166666666667 0.0735727717303945 8.26298680796723e-05 -2.21452417283049 10.5104224822602 O43719 HTATSF1 O43719.S616.p_HTATSF1 O43719_S616sS624s_2_2_616_624 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17953.17953.5 12.72 12.72 1.65 4 2 2 0 826.3575 3967.8183 S616s S624s TMT10 610 (K) VLDEEGsEREFDEDsDEKEEEEDTYEK (V) VLDEEGS(0.99)EREFDEDS(0.99)DEKEEEEDT(0.0)Y(0.0)EK K:TMT10,s:Phosphorylated S HTATSF1 86421.8 5 20 149.1 512 HUMAN 1 -11.3328 40.8286 KVLELRKSDVVLDKT-p Q8WUR7-3;S116-p KVLELRKSDVVLDKT 0.0520154613962689 0.145976233635103 -0.451 -0.185333333333333 27.9017564243194 11.0084303160978 -0.451 -0.185333333333333 0.00162115431865036 0.0792787818443585 -5.81827442391773 -2.15661319019252 Q8WUR7 C15orf40 Q8WUR7.3.S116.p_C15orf40 Q8WUR7-3_S116s _1_1_116_116 Q8WUR7-3 Q8WUR7-3|Q8WUR7-2 Isoform 3 of UPF0235 protein C15orf40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21423.21423.4 11.62 11.62 99 1 1 1 0 571.0927 2201.3836 S116s TMT10 110 (K) VLELRKsDVVLDK (T) VLELRKS(1.0)DVVLDK K:TMT10,s:Phosphorylated S C15orf40 17592 2 1 6446.1 11.62 HUMAN 1 -27.9018 -11.0084 KVLGNPKSDEMNVKV-p G8JLA2;S58-p KVLGNPKSDEMNVKV 0.706540552407433 0.991961304482554 -0.052 -0.00166666666666664 2.8361401352562 0.0514136897991443 -0.052 -0.00166666666666663 0.520458357095311 0.988231359047913 -0.686929362796396 -0.0154426462769453 G8JLA2 NotFound G8JLA2.S58.p_NotFound G8JLA2_S58s _1_1_58_58 G8JLA2 G8JLA2|J3KND3|P60660|P60660-2|F8W1R7 Myosin light polypeptide 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17280.17280.3 12.76 12.76 99 1 1 1 0 733.3996 2118.2196 S58s TMT10 52 (K) VLGNPKsDEMNVK (V) VLGNPKS(1.0)DEMNVK K:TMT10,s:Phosphorylated S MYL6 17260.1 2 2 3315.1 54.12 HUMAN 1 -2.8361 -0.0514 KVLGRRDSDDDHSRN-p Q5SYE7-2;S1373-p KVLGRRDSDDDHSRN 0.282619182017525 0.658522508765395 -0.227333333333333 -0.0656666666666667 10.3727101951776 2.48192454510831 -0.227333333333333 -0.0656666666666667 0.0917759693935072 0.564686682471637 -2.04654393763313 -0.612989393324099 Q5SYE7 NHSL1 Q5SYE7.2.S1373.p_NHSL1 Q5SYE7-2_S1373s _1_1_1373_1373 Q5SYE7-2 Q5SYE7|Q5SYE7-2 Isoform 2 of NHS-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3483.3483.4 7.13 7.13 7.127 2 1 1 0 459.9688 1756.8888 S1373s TMT10 1367 (K) VLGRRDsDDDHSR (N) VLGRRDS(0.99)DDDHS(0.0)R s:Phosphorylated S NHSL1 171957.1 1 14 747.1 232.6 HUMAN 1 -10.3727 -2.4819 KVLGRTGSQGQCTQV-p P62857;S23-p KVLGRTGSQGQCTQV 0.0198229955984014 0.00356137322963082 -0.749666666666667 -0.688333333333333 39.7932372187727 36.4934198223616 -0.749666666666667 -0.688333333333333 0.000104876039419673 0.000224211568971817 -10.0618440368852 -8.66059303970142 P62857 RPS28 P62857.S23.p_RPS28 P62857_S23s _1_1_23_23 P62857 P62857 40S ribosomal protein S28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4387.4387.2 12.97 12.97 2.402 3 1 1 0 765.8504 1450.727 S23s TMT10 21 (R) TGsQGQCTQVR (V) T(0.0)GS(0.99)QGQCT(0.0)QVR C:Carbamidomethylation,s:Phosphorylated S RPS28 7898 2 2 4399.1 32.02 HUMAN 1 -39.7932 -36.4934 KVLISVGSYKSSVES-p Q8TEV9;S417-p KVLISVGSYKSSVES 0.078227674708839 0.490445693994919 -0.459 0.0856666666666667 23.6145462663923 4.13626784356866 -0.459 0.0856666666666667 0.00435056211199627 0.38580976502533 -4.70122695025537 0.942925596700179 Q8TEV9 SMCR8 Q8TEV9.S417.p_SMCR8 Q8TEV9_S417s _1_1_417_417 Q8TEV9 Q8TEV9|Q8TEV9-2 Guanine nucleotide exchange protein SMCR8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23547.23547.2 13.76 8.2 2.42 3 1 1 0 752.4333 1423.8925 S417s TMT10 411 (K) VLISVGsYK (S) VLIS(0.0)VGS(0.99)Y(0.0)K K:TMT10,s:Phosphorylated S SMCR8 105933.1 3 3 2079.1 98.78 HUMAN 1 -23.6145 4.1363 KVLKVEVTPTVPRIS-p Q8IXS8;T306-p KVLKVEVTPTVPRIS 0.186317782283684 0.388503868976511 0.280333333333333 0.117666666666667 14.3423601338197 5.45877035903539 0.280333333333333 0.117666666666667 0.0367928971653147 0.284526658880879 2.7559959682425 1.18724643357427 Q8IXS8 FAM126B Q8IXS8.T306.p_FAM126B Q8IXS8_T306t _1_1_306_306 Q8IXS8 Q8IXS8 Protein FAM126B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13712.13712.3 12.79 7.31 3.836 2 1 1 0 436.2371 1226.7306 T306t TMT10 303 (K) VEVtPTVPR (I) VEVT(0.99)PT(0.0)VPR t:Phosphorylated T FAM126B 59101.9 4 1 955.1 195.77 HUMAN 1 14.3424 5.4588 KVLLGFSSDESDVEA-p Q9Y2U8;S141-p KVLLGFSSDESDVEA 0.5393051796237 0.937472703076645 -0.0913333333333333 0.00966666666666666 4.9557319158459 0.397097111523307 -0.0913333333333333 0.00966666666666666 0.319467592117865 0.912620644653081 -1.09593945413246 0.114951500704386 Q9Y2U8 LEMD3 Q9Y2U8.S141.p_LEMD3 Q9Y2U8_S140sS141s_2_2_140_141 Q9Y2U8 Q9Y2U8 Inner nuclear membrane protein Man1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27923.28350.3 14.55 14.55 2.557 4 2 2 0 732.9932 2037.0338 S140s S141s TMT10 135 (K) VLLGFssDESDVEASPR (D) VLLGFS(0.99)S(0.99)DES(0.0)DVEAS(0.0)PR s:Phosphorylated S LEMD3 100851.5 8 20 412.1 321.94 HUMAN 1 -4.9557 0.3971 KVLLRRKSELPQDVY-p Q14738;S573-p KVLLRRKSELPQDVY 0.803042159535173 0.0680276802827312 0.0473333333333333 0.458 1.83499227163085 15.5294157772973 0.0473333333333333 0.458 0.655391452116445 0.0279935787022201 0.471941676231183 2.97631902799194 Q14738 PPP2R5D Q14738.S573.p_PPP2R5D Q14738_S573s _1_1_573_573 Q14738 Q14738|E9PFR3|Q14738-2|Q14738-3 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16032.16032.4 17.07 13.36 12.009 3 1 1 0 586.8361 2264.3581 S573s TMT10 571 (R) RKsELPQDVYTIK (A) RKS(0.99)ELPQDVY(0.0)T(0.0)IK K:TMT10,s:Phosphorylated S PPP2R5D 70332.8 7 9 2426.1 83.98 HUMAN 1 1.835 15.5294 KVLSPLRSPPLIGSE-p P46821;S1400-p KVLSPLRSPPLIGSE 0.0219445476003805 0.00426324383819359 -0.882 -0.972333333333333 38.4626889480947 34.8499915389031 -0.882 -0.972333333333334 0.000142472519732479 0.000327341332617553 -9.48175916131118 -8.03915290381092 P46821 MAP1B P46821.S1400.p_MAP1B P46821_S1396sS1400s_2_2_1396_1400 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35877.35877.4 19.66 19.66 5.059 7 2 2 0 849.9264 3236.7455 S1396s S1400s TMT10 1394 (K) VLsPLRsPPLIGSESAYESFLSADDK (A) VLS(0.99)PLRS(0.99)PPLIGS(0.0)ES(0.0)AY(0.0)ES(0.0)FLS(0.0)ADDK K:TMT10,s:Phosphorylated S MAP1B 271827.6 1 28 210.1 442.48 HUMAN 1 -38.4627 -34.85 KVLTQMGSPSVRCSS-p Q15796-2;S428-p KVLTQMGSPSVRCSS 0.946134394492223 0.304512716891113 -0.012 -0.135 0.473596306599224 6.82021682249816 -0.012 -0.135 0.896685959094327 0.207959286037004 -0.136068554533115 -1.42912023265963 Q15796 SMAD2 Q15796.2.S428.p_SMAD2 Q15796-2_S428s _1_1_428_428 Q15796-2 Q15796|Q15796-2 Isoform Short of Mothers against decapentaplegic homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15814.15814.3 9.81 9.81 2.695 3 1 1 0 495.2575 1403.7878 S428s TMT10 422 (K) VLTQMGsPSVR (C) VLT(0.0)QMGS(0.99)PS(0.0)VR s:Phosphorylated S SMAD2 49810.5 1 2 2883.3 67.13 HUMAN 1 -0.4736 -6.8202 KVMPQNHSFLENDLK-p Q9H8K7;S302-p KVMPQNHSFLENDLK 0.501579707468534 0.00907305160121128 -0.094 -0.463 5.52600367315193 28.8946445454926 -0.094 -0.463 0.280155809476953 0.00128983912229963 -1.19963756528901 -6.09354696548881 Q9H8K7 C10orf88 Q9H8K7.S302.p_C10orf88 Q9H8K7_S302s _1_1_302_302 Q9H8K7 Q9H8K7 Uncharacterized protein C10orf88 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20378.20378.3 14.18 14.18 99 1 1 1 0 737.3761 2130.1418 S302s TMT10 296 (K) VMPQNHsFLENDLK (N) VMPQNHS(1.0)FLENDLK K:TMT10,s:Phosphorylated S C10orf88 49932.8 1 3 2780.1 70.89 HUMAN 1 -5.526 -28.8946 KVMQEQGTHPKFQKP-p P35579;T552-p KVMQEQGTHPKFQKP 0.146782194171833 0.601141912743447 0.358333333333333 0.0523333333333333 16.9284766426781 2.99644311608108 0.358333333333333 0.0523333333333333 0.020283940864042 0.501597875504853 3.24856090042042 0.719588834833005 P35579 MYH9 P35579.T552.p_MYH9 P35579_T552t _1_1_552_552 P35579 P35579 Myosin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6516.6516.3 7.19 7.19 99 1 1 1 0 564.9568 1612.8881 T552t TMT10 546 (K) VMQEQGtHPK (F) VMQEQGT(1.0)HPK K:TMT10,t:Phosphorylated T MYH9 227783.5 1 23 296.1 379.15 HUMAN 1 16.9285 2.9964 KVNKEEETDENETEW-p P11717;T2362-p KVNKEEETDENETEW 0.56875083538337 0.789604531805851 0.0793333333333333 -0.0266666666666667 4.50878217357731 1.42604407871922 0.0793333333333333 -0.0266666666666667 0.354096621130409 0.720104611510817 1.01321758074768 -0.37753879995668 P11717 IGF2R P11717.T2362.p_IGF2R P11717_T2362t _1_1_2362_2362 P11717 P11717 Cation-independent mannose-6-phosphate receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29698.29739.4 27.44 27.44 4.471 2 1 1 0 899.1842 3513.746 T2362t TMT10 2356 (K) VNKEEEtDENETEWLMEEIQLPPPR (Q) VNKEEET(0.99)DENET(0.0)EWLMEEIQLPPPR K:TMT10,t:Phosphorylated T IGF2R 281330.5 4 3 1952.1 105.32 HUMAN 1 4.5088 -1.426 KVNKYGDTWDE____-p Q9NX40;T242-p KVNKYGDTWDE____ 0.528366692415548 0.00728722690180359 0.114 0.508333333333333 5.12738009016446 30.5699036724377 0.114 0.508333333333333 0.307087395450544 0.000877020273448851 1.12735075101217 6.59669093293753 Q9NX40 OCIAD1 Q9NX40.T242.p_OCIAD1 Q9NX40_T242t _1_1_242_242 Q9NX40 Q9NX40|D6RBN5|Q9NX40-4|D6RIV2 OCIA domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14932.14932.2 8.51 8.51 8.508 2 1 1 0 882.916 1684.8583 T242t TMT10 236 (K) VNKYGDtWDE (-) VNKY(0.0)GDT(0.99)WDE K:TMT10,t:Phosphorylated T OCIAD1 27796.8 3 4 2651.1 75.21 HUMAN 1 5.1274 30.5699 KVPDFLGSPGAEGKD-p Q96RY7;S360-p KVPDFLGSPGAEGKD 0.862800750352503 0.152890489264017 -0.0413333333333333 0.192666666666667 1.25019195045091 10.7269955253336 -0.0413333333333333 0.192666666666667 0.749861066072142 0.084586381633686 -0.33551029920534 2.10742407309363 Q96RY7 IFT140 Q96RY7.S360.p_IFT140 Q96RY7_S360s _1_1_360_360 Q96RY7 Q96RY7 Intraflagellar transport protein 140 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20759.20759.3 18.86 18.86 99 1 1 1 0 723.7386 2089.2261 S360s TMT10 353 (R) KVPDFLGsPGAEGK (D) KVPDFLGS(1.0)PGAEGK K:TMT10,s:Phosphorylated S IFT140 166958.6 2 1 3843.1 41.79 HUMAN 1 -1.2502 10.727 KVPEKPPTPKESPHF-p Q9HDC5;T448-p KVPEKPPTPKESPHF 0.269424134699647 0.0214728513781524 -0.529 0.36 10.7960657287704 22.8091919755636 -0.529 0.36 0.083251760682569 0.00523697863867443 -2.12041885691903 4.50447396771762 Q9HDC5 JPH1 Q9HDC5.T448.p_JPH1 Q9HDC5_T448t _1_1_448_448 Q9HDC5 Q9HDC5 Junctophilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11867.11867.3 7.22 7.22 99 1 1 1 0 587.3498 1680.0663 T448t TMT10 442 (K) VPEKPPtPK (E) VPEKPPT(1.0)PK K:TMT10,t:Phosphorylated T JPH1 72141.1 1 6 675.1 247.46 HUMAN 1 -10.7961 22.8092 KVPGEQGSDEEHCKE-p Q9UNS1;S1121-p KVPGEQGSDEEHCKE 0.574777890570195 0.0132384812844575 -0.0883333333333333 -0.536333333333333 4.42362723144126 26.1357353005569 -0.0883333333333334 -0.536333333333333 0.361108138812969 0.0024345935659419 -0.997288549786358 -5.33024497556097 Q9UNS1 TIMELESS Q9UNS1.S1121.p_TIMELESS Q9UNS1_S1121s _1_1_1121_1121 Q9UNS1 Q9UNS1|Q9UNS1-2 Protein timeless homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17146.17146.5 21.39 14.26 20.511 3 1 1 0 954.89 4690.444 S1121s TMT10 1094 (R) AAASLSQPEEEQKLQPELQPKVPGEQGsDEEHCK (E) AAAS(0.0)LS(0.0)QPEEEQKLQPELQPKVPGEQGS(0.99)DEEHCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TIMELESS 139682.8 6 4 579.1 266.89 HUMAN 1 -4.4236 -26.1357 KVPKFGVSTGREGQT-p Q09666;S317-p KVPKFGVSTGREGQT 0.53706412572523 0.188832033878987 0.0826666666666667 0.144333333333333 4.99091843432558 9.52002527022773 0.0826666666666667 0.144333333333333 0.316889724228572 0.111685674912408 1.10239359047477 1.89770268372687 Q09666 AHNAK Q09666.S317.p_AHNAK Q09666_S317s _1_1_317_317 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10605.11376.3 10.78 10.78 1.141 3 1 1 0 634.6681 1822.0223 S317s TMT10 314 (K) FGVsTGREGQTPK (A) FGVS(0.99)T(0.0)GREGQT(0.0)PK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 15 1.1 4313.36 HUMAN 1 4.9909 9.52 KVPLKRLSDEHEPEQ-p Q9UK59;S514-p KVPLKRLSDEHEPEQ 0.848303618808871 0.022053582526035 0.029 -0.380333333333333 1.38013124719536 22.6334545978921 0.029 -0.380333333333333 0.727757810793213 0.00545323910310641 0.366688148459987 -4.46341092904901 Q9UK59 DBR1 Q9UK59.S514.p_DBR1 Q9UK59_S514s _1_1_514_514 Q9UK59 Q9UK59|Q9UK59-2 Lariat debranching enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4368.4368.3 11.72 11.72 99 1 1 1 0 568.935 1624.8241 S514s TMT10 512 (K) RLsDEHEPEQR (K) RLS(1.0)DEHEPEQR s:Phosphorylated S DBR1 62181.4 5 1 4495.1 30.73 HUMAN 1 1.3801 -22.6335 KVPLPSLSPTMQAGT-p P10515;S100-p KVPLPSLSPTMQAGT 0.781454936409064 0.31237795216008 -0.0433333333333333 0.108 2.05742275946638 6.67940137612414 -0.0433333333333333 0.108 0.622669687396908 0.214812654771033 -0.521481499490107 1.40439861608811 P10515 DLAT P10515.S100.p_DLAT P10515_S100s _1_1_100_100 P10515 P10515|E9PEJ4 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27204.27204.3 15.25 15.25 1.297 4 1 1 0 683.3671 1968.1149 S100s TMT10 94 (K) VPLPSLsPTMQAGTIAR (W) VPLPS(0.0)LS(0.99)PT(0.0)MQAGT(0.0)IAR s:Phosphorylated S DLAT 69508.9 2 2 2952.1 64.89 HUMAN 1 -2.0574 6.6794 KVPNGSGSPTKDALG-p E7EV90;S389-p KVPNGSGSPTKDALG 0.826817782780066 0.00787091228994564 -0.0366666666666667 -0.487666666666667 1.591092530533 30.0083817036036 -0.0366666666666667 -0.487666666666667 0.693251386673523 0.000998071902595379 -0.41621370763637 -6.42448715675678 E7EV90 SLC45A4 E7EV90.S389.p_SLC45A4 E7EV90_S389s _1_1_389_389 E7EV90 E7EV90|Q5BKX6-3|Q5BKX6-2 Solute carrier family 45 member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8048.8048.3 8.76 8.76 1.434 3 1 1 0 494.5978 1401.8102 S389s TMT10 383 (K) VPNGSGsPTK (D) VPNGS(0.0)GS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S SLC45A4 89416.6 4 2 2550.1 78.93 HUMAN 1 -1.5911 -30.0084 KVPSEAPSPMPTHRS-p Q9H1V8;S686-p KVPSEAPSPMPTHRS 0.374012612576552 0.0398043411475457 0.172 -0.256333333333333 7.90661582907393 18.7771527067139 0.172 -0.256333333333333 0.161934139225159 0.0132521007607626 1.61895667623559 -3.61816497319739 Q9H1V8 SLC6A17 Q9H1V8.S686.p_SLC6A17 Q9H1V8_S686s _1_1_686_686 Q9H1V8 Q9H1V8 Sodium-dependent neutral amino acid transporter SLC6A17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9544.9544.3 13.77 13.77 5.517 3 1 1 0 572.2783 1634.8522 S686s TMT10 680 (K) VPSEAPsPMPTHR (S) VPS(0.0)EAPS(0.99)PMPT(0.0)HR s:Phosphorylated S SLC6A17 81798.7 1 1 5134.1 22.55 HUMAN 1 7.9066 -18.7772 KVPSEGAYDIILPRA-p A0A0C4DFY5;Y432-p KVPSEGAYDIILPRA 0.909465039529785 0.00773874786320918 -0.0253333333333333 0.467666666666667 0.808598223575408 30.1436507197817 -0.0253333333333334 0.467666666666667 0.830118662466955 0.000967464254903673 -0.225153289836539 6.46563584494113 A0A0C4DFY5 GPRC5C A0A0C4DFY5.Y432.p_GPRC5C A0A0C4DFY5_Y432y _1_1_432_432 A0A0C4DFY5 A0A0C4DFY5 G-protein-coupled receptor family C group 5 member C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23375.23375.3 10.27 10.27 8.202 2 1 1 0 580.3044 1658.9315 Y432y TMT10 426 (K) VPSEGAyDIILPR (A) VPS(0.0)EGAY(0.99)DIILPR y:Phosphorylated Y GPRC5C 53504 1 6 1470.1 139.57 HUMAN 1 -0.8086 30.1437 KVPTTPASPVKNWGG-p Q6IE81;S743-p KVPTTPASPVKNWGG 0.550460424644386 0.00246432253845191 -0.0946666666666667 -0.949 4.78306619236666 39.9802996543451 -0.0946666666666666 -0.949 0.332424772922103 0.000100454647622675 -1.06414965468292 -10.1225041491758 Q6IE81 JADE1 Q6IE81.S743.p_JADE1 Q6IE81_S743s _1_1_743_743 Q6IE81 Q6IE81|Q6IE81-2 Protein Jade-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13894.13894.2 12 9.36 1.42 3 1 1 0 767.9357 1454.8983 S743s TMT10 737 (K) VPTTPAsPVK (N) VPT(0.0)T(0.0)PAS(0.99)PVK K:TMT10,s:Phosphorylated S JADE1 97129.2 5 5 1555.1 131.82 HUMAN 1 -4.7831 -39.9803 KVQFELHYQEVKWRK-p P19823;Y183-p KVQFELHYQEVKWRK 0.459914950679283 0.138284732890357 0.160666666666667 0.156 6.21902648726016 11.3197010935413 0.160666666666667 0.156 0.238834659371203 0.0737955018693063 1.32348903806105 2.21118544243232 P19823 ITIH2 P19823.Y183.p_ITIH2 P19823_Y183y_1_1_183_183 P19823 P19823|Q5T985 Inter-alpha-trypsin inhibitor heavy chain H2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20704.20704.5 9.22 4.18 8.759 4 1 1 0 827.417 4037.1207 M162m Y183y Hydrogen 157 (R) SSALDmENFRTEVNVLPGAKVQFELHyQEVK (W) S(0.0)S(0.0)ALDM(1.0)ENFRT(0.0)EVNVLPGAKVQFELHY(0.99)QEVK K:TMT10-Lys-Only,m:Oxidized methionine,y:Phosphorylated Y ITIH2 106917.9 1 1 6829.1 9.22 HUMAN 1 6.219 11.3197 KVQISPDSGGLPERS-p A0A087WTP3;S184-p KVQISPDSGGLPERS 0.836375527025859 0.124596696067036 0.0366666666666667 0.159333333333333 1.4984552698955 11.9310530189066 0.0366666666666666 0.159333333333333 0.708197636461767 0.0641054123549361 0.394625735513772 2.31896202057534 A0A087WTP3 NotFound A0A087WTP3.S184.p_NotFound A0A087WTP3_S184s _1_1_184_184 A0A087WTP3 Q92945|A0A087WTP3 Far upstream element-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15402.15402.2 13.73 13.73 2.681 2 1 1 0 832.4163 1583.8591 S184s TMT10 178 (K) VQISPDsGGLPER (S) VQIS(0.0)PDS(0.99)GGLPER s:Phosphorylated S KHSRP 73482.9 2 5 970.1 193.49 HUMAN 1 1.4985 11.9311 KVQSGSESVIQEYVD-p Q15149;S1448-p KVQSGSESVIQEYVD 0.679055529340642 0.168262334196269 0.0756666666666667 -0.145333333333333 3.14657663347951 10.1809164031969 0.0756666666666667 -0.145333333333333 0.484554171402424 0.0959198210096978 0.750029623271491 -2.01232967046794 Q15149 PLEC Q15149.S1448.p_PLEC Q15149_S1448s _1_1_1448_1448 Q15149 Q15149|Q15149-2|Q15149-3 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24904.24904.3 15.49 15.49 2.379 4 1 1 0 706.6863 2038.0654 S1448s TMT10 1442 (K) VQSGSEsVIQEYVDLR (T) VQS(0.0)GS(0.0)ES(0.99)VIQEY(0.0)VDLR s:Phosphorylated S PLEC 533778 1 14 44.1 794.85 HUMAN 1 3.1466 -10.1809 KVRDGRKSFDLGSPK-p O60229-6;S102-p KVRDGRKSFDLGSPK 0.0812570195389155 0.0441225122047734 -0.392333333333333 -0.376666666666667 23.2947925331472 18.1511775955044 -0.392333333333333 -0.376666666666667 0.00468296321826723 0.0153067236147568 -4.62446401496 -3.49003805858971 O60229 KALRN O60229.6.S102.p_KALRN O60229-6_S102s _1_1_102_102 O60229-6 J3QSW6|O60229|O60229-4|O60229-6|O60229-5 Isoform 6 of Kalirin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17274.17274.4 15 15 1.276 5 1 1 0 787.1343 3065.5518 S102s TMT10 102 (K) sFDLGSPKPGDETTPQGDSADEK (S) S(0.99)FDLGS(0.0)PKPGDET(0.0)T(0.0)PQGDS(0.0)ADEK K:TMT10,s:Phosphorylated S KALRN 143044.5 1 1 450.2 308.79 HUMAN 1 -23.2948 -18.1512 KVRERHFSESTSIDN-p Q8NEV8;S1821-p KVRERHFSESTSIDN 0.150684388684632 0.00425039176962222 -0.255 -0.637333333333333 16.561789912985 34.8670634862205 -0.255 -0.637333333333333 0.0220709490749794 0.000326057092362461 -3.17681692135463 -8.04540272609076 Q8NEV8 EXPH5 Q8NEV8.S1821.p_EXPH5 Q8NEV8_S1821s _1_1_1821_1821 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14275.14275.2 16.48 12.62 2.313 5 1 1 0 936.9368 1792.9027 S1821s TMT10 1819 (R) HFsESTSIDNALSR (L) HFS(0.99)ES(0.0)T(0.0)S(0.0)IDNALS(0.0)R s:Phosphorylated S EXPH5 223884.5 3 29 129.1 537.25 HUMAN 1 -16.5618 -34.8671 KVRGLPWSCSADEVQ-p G8JLB6;S21-p KVRGLPWSCSADEVQ 0.864453015861562 0.45248952630223 0.037 0.0903333333333334 1.23379268977866 4.59036650023134 0.037 0.0903333333333334 0.752697946192141 0.347506834174596 0.331536695693552 1.02823189292096 G8JLB6 HNRNPH1 G8JLB6.S21.p_HNRNPH1 G8JLB6_S21s _1_1_21_21 G8JLB6 G8JLB6|P31943|E9PCY7|D6RIH9|D6R9D3 Heterogeneous nuclear ribonucleoprotein H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19232.19232.3 11.33 11.33 1.205 2 1 1 0 605.2785 1733.8478 S21s TMT10 17 (R) GLPWsCSADEVQR (F) GLPWS(0.99)CS(0.0)ADEVQR C:Carbamidomethylation,s:Phosphorylated S HNRNPH1 51514.2 2 1 990.2 191.56 HUMAN 1 1.2338 4.5904 KVRIPRNSPLPNCTY-p Q5JTD0;S345-p KVRIPRNSPLPNCTY 0.317619523036944 0.914757303980725 0.169666666666667 0.0106666666666667 9.33031826111587 0.543913293752397 0.169666666666667 0.0106666666666667 0.116672411366642 0.882284542721598 1.86555903991 0.15519102325112 Q5JTD0 TJAP1 Q5JTD0.S345.p_TJAP1 Q5JTD0_S345s _1_1_345_345 Q5JTD0 Q5JTD0|Q5JTD0-2|Q5JTD0-4 Tight junction-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11471.11471.3 11.37 9.68 2.825 4 1 1 0 690.3457 1989.0537 S345s TMT10 341 (R) IPRNsPLPNCTYATR (Q) IPRNS(0.99)PLPNCT(0.0)Y(0.0)AT(0.0)R C:Carbamidomethylation,s:Phosphorylated S TJAP1 62162.4 1 5 1364.1 149.81 HUMAN 1 9.3303 0.5439 KVRIVEYSPPSAPRR-p O95696-2;S128-p KVRIVEYSPPSAPRR 0.295243174589512 0.673614682268759 0.166666666666667 0.044 9.98076672979846 2.34642715009525 0.166666666666667 0.044 0.100443844497365 0.582582298956128 1.9783691633295 0.584151556298694 O95696 BRD1 O95696.2.S128.p_BRD1 O95696-2_S128s _1_1_128_128 O95696-2 O95696-2 Isoform 2 of Bromodomain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16163.16163.3 12.64 12.64 1.828 3 1 1 0 508.9271 1444.7997 S128s TMT10 124 (R) IVEYsPPSAPR (R) IVEY(0.0)S(0.99)PPS(0.0)APR s:Phosphorylated S BRD1 135466.1 5 3 1002.1 189.89 HUMAN 1 9.9808 2.3464 KVSEEDQSLENSEAD-p A0A087WXK5;S1358-p KVSEEDQSLENSEAD 0.93306667659969 0.0411149475239487 0.0406666666666667 0.506 0.592366538324911 18.577969910354 0.0406666666666667 0.506 0.872495802266029 0.0138740421305699 0.168250958287627 3.57714668285859 A0A087WXK5 NotFound A0A087WXK5.S1358.p_NotFound A0A087WXK5_S1358s _1_1_1358_1358 A0A087WXK5 A0A087WXK5|Q9BZC7-3|J3QSS3|Q9BZC7-2 ATP-binding cassette sub-family A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14112.14112.2 12.97 12.97 3.336 3 1 1 0 1159.0348 2237.1185 S1358s TMT10 1352 (K) VSEEDQsLENSEADVK (E) VS(0.0)EEDQS(0.99)LENS(0.0)EADVK K:TMT10,s:Phosphorylated S ABCA2 275398.6 2 6 1069.1 180.75 HUMAN 1 0.5924 18.578 KVSGTLDTPEKTVDS-p Q9BYG3;T223-p KVSGTLDTPEKTVDS 0.126634139300811 0.000952253650599092 -0.295 -1.59866666666667 18.6126593979453 58.8142325963723 -0.295 -1.59866666666667 0.0137636639419822 1.31394364988827e-06 -3.58733453105067 -22.9303851416732 Q9BYG3 NIFK Q9BYG3.T223.p_NIFK Q9BYG3_T223t _1_1_223_223 Q9BYG3 Q9BYG3 MKI67 FHA domain-interacting nucleolar phosphoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21067.21067.5 23.64 23.64 1.16 8 1 1 0 786.4127 3848.0719 T223t TMT10 216 (K) KVSGTLDtPEKTVDSQGPTPVCTPTFLER (R) KVS(0.0)GT(0.0)LDT(0.99)PEKT(0.0)VDS(0.0)QGPT(0.0)PVCT(0.0)PT(0.0)FLER K:TMT10,C:Carbamidomethylation,t:Phosphorylated T NIFK 34392.7 13 2 1531.1 133.75 HUMAN 1 -18.6127 -58.8142 KVSKPSLSWKELRGR-p Q68DK2;S1335-p KVSKPSLSWKELRGR 0.108274227113564 0.0590932007372115 -0.674 0.266 20.2649116725371 16.3671763369997 -0.674 0.266 0.00940824964481202 0.0230824745981717 -3.93603532582945 3.13673354730022 Q68DK2 ZFYVE26 Q68DK2.S1335.p_ZFYVE26 Q68DK2_S1335s _1_1_1335_1335 Q68DK2 Q68DK2|Q68DK2-2|Q68DK2-5|G3V2D8 Zinc finger FYVE domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18749.18749.3 9.83 9.83 2.5 3 1 1 0 600.3525 1719.0772 S1335s TMT10 1329 (K) VSKPSLsWK (E) VS(0.0)KPS(0.0)LS(0.99)WK K:TMT10,s:Phosphorylated S ZFYVE26 289306.4 1 8 898.1 203.99 HUMAN 1 -20.2649 16.3672 KVSNLQVSPKSEDIS-p O00443;S259-p KVSNLQVSPKSEDIS 0.0147628603234759 0.0377617688688658 -0.978333333333333 -0.739333333333333 43.30099856355 19.115112440611 -0.978333333333333 -0.739333333333334 4.67627608359356e-05 0.0122599516075274 -11.7507349389528 -3.68830668220119 O00443 PIK3C2A O00443.S259.p_PIK3C2A O00443_S259s _1_1_259_259 O00443 O00443|O00443-2|A0A0C4DGF9 Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14773.14773.2 13.4 8.31 6.528 2 1 1 0 755.4265 1429.8779 S259s TMT10 253 (K) VSNLQVsPK (S) VS(0.0)NLQVS(0.99)PK K:TMT10,s:Phosphorylated S PIK3C2A 192273.6 4 2 2829.1 68.79 HUMAN 1 -43.301 -19.1151 KVSPRAASPAKPSSL-p Q8N3V7-2;S589-p KVSPRAASPAKPSSL 0.648120240178882 0.00532492125204501 -0.0616666666666667 0.567333333333333 3.52888141155014 33.0185412167118 -0.0616666666666667 0.567333333333333 0.443722916489634 0.000499052089542027 -0.825930910929974 7.39245731985631 Q8N3V7 SYNPO Q8N3V7.2.S589.p_SYNPO Q8N3V7-2_S589s _1_1_589_589 Q8N3V7-2 Q8N3V7|Q8N3V7-2|Q8N3V7-3 Isoform 2 of Synaptopodin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23991.23991.4 14.96 14.96 1.479 3 1 1 0 643.8743 2492.5055 S589s TMT10 587 (R) AAsPAKPSSLDLVPNLPK (G) AAS(0.99)PAKPS(0.0)S(0.0)LDLVPNLPK K:TMT10,s:Phosphorylated S SYNPO 96794.1 3 10 947.1 196.99 HUMAN 1 -3.5289 33.0185 KVSRDTLYEAVREVL-p P62906;Y11-p KVSRDTLYEAVREVL 0.379231264309477 0.669069046411955 0.165333333333333 -0.0446666666666667 7.78016697839256 2.3851883145618 0.165333333333333 -0.0446666666666666 0.166718311113616 0.577405835259258 1.59700079187651 -0.592436628141786 P62906 RPL10A P62906.Y11.p_RPL10A P62906_Y11y _1_1_11_11 P62906 P62906 60S ribosomal protein L10a GG20160819_MSz_CCLE_T4D7_pY_Injection_01.14720.14720.3 8.79 8.79 8.785 3 1 1 0 539.9453 1537.8536 Y11y TMT10 5 (K) VSRDTLyEAVR (E) VS(0.0)RDT(0.0)LY(0.99)EAVR y:Phosphorylated Y RPL10A 25002 2 1 379.1 8.79 HUMAN 1 7.7802 -2.3852 KVSRHASSSPESPKP-p Q9UQ35;S436-p KVSRHASSSPESPKP 0.267086807703558 0.264425494415324 -0.167333333333333 0.202 10.8640516216758 7.60986400220948 -0.167333333333333 0.202 0.0819586578547323 0.173385829206702 -2.13230895606533 1.56692830279741 Q9UQ35 SRRM2 Q9UQ35.S436.p_SRRM2 Q9UQ35_S435sS436sS437s_3_3_435_437 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5795.5795.3 9.54 9.54 9.541 5 3 3 0 865.72 2355.257 S435s S436s S437s TMT10 433 (R) HAsssPESPKPAPAPGSHR (E) HAS(0.99)S(0.99)S(0.99)PES(0.0)PKPAPAPGS(0.0)HR K:TMT10,s:Phosphorylated S SRRM2 300351.7 5 250 2.1 3310.34 HUMAN 1 -10.8641 7.6099 KVSSGYSSPTTSEMS-p Q96AY4;S2251-p KVSSGYSSPTTSEMS 0.482231396303745 0.0135075261562752 -0.261 0.391666666666667 5.82923448821539 25.9874614896658 -0.261 0.391666666666667 0.261262182917558 0.00251914897435086 -1.2540827494583 5.29135013270711 Q96AY4 TTC28 Q96AY4.S2251.p_TTC28 Q96AY4_S2251s _1_1_2251_2251 Q96AY4 Q96AY4|A0A087WW06 Tetratricopeptide repeat protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16962.16962.2 15.19 15.19 1.149 9 1 1 0 1100.0314 2119.0993 S2251s TMT10 2245 (K) VSSGYSsPTTSEMSIK (D) VS(0.0)S(0.0)GY(0.0)S(0.0)S(0.99)PT(0.0)T(0.0)S(0.0)EMS(0.0)IK K:TMT10,s:Phosphorylated S TTC28 272819.5 2 8 1011.1 188.93 HUMAN 1 -5.8292 25.9875 KVSTAVLSITAKAKK-p A0A087WW66;S834-p KVSTAVLSITAKAKK 0.253428545649867 0.0316664354179808 -0.235 -0.314 11.3626131699934 20.249203235993 -0.235 -0.314 0.0730699286041088 0.00944234091180792 -2.21976241862757 -3.92890229406481 A0A087WW66 NotFound A0A087WW66.S834.p_NotFound A0A087WW66_S834s _1_1_834_834 A0A087WW66 Q99460|A0A087WW66|Q99460-2 26S proteasome non-ATPase regulatory subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23114.23114.3 8.98 8.66 1.926 4 1 1 0 543.3217 1547.9773 S834s TMT10 828 (K) VSTAVLsITAK (A) VS(0.0)T(0.0)AVLS(0.99)IT(0.0)AK K:TMT10,s:Phosphorylated S PSMD1 106876.4 1 7 1299.1 156.53 HUMAN 1 -11.3626 -20.2492 KVSTDLGSGDKILAL-p Q8WZA0-2;S194-p KVSTDLGSGDKILAL 0.765494946141546 0.231570502048241 -0.052 0.168333333333333 2.22935226192331 8.36850262911451 -0.052 0.168333333333333 0.598500853132668 0.145596098375807 -0.559015279351679 1.69846869392352 Q8WZA0 LZIC Q8WZA0.2.S194.p_LZIC Q8WZA0-2_S194s _1_1_194_194 Q8WZA0-2 Q8WZA0-2 Isoform 2 of Protein LZIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33514.33514.4 14.92 14.92 2.447 4 1 1 0 737.4082 2866.6381 S194s TMT10 188 (K) VSTDLGsGDKILALASFEVEK (T) VS(0.0)T(0.0)DLGS(0.99)GDKILALAS(0.0)FEVEK K:TMT10,s:Phosphorylated S LZIC 23982.1 3 1 5116.1 22.77 HUMAN 1 -2.2294 8.3685 KVSTTTDSPVSPAQA-p Q96E09;S267-p KVSTTTDSPVSPAQA 0.59351749575714 0.00402540446823046 0.073 0.780333333333333 4.17866075977248 35.3090730234788 0.073 0.780333333333334 0.382062069713838 0.000294505017068923 0.95113038590863 8.20869287045969 Q96E09 FAM122A Q96E09.S267.p_FAM122A Q96E09_S267s _1_1_267_267 Q96E09 Q96E09 Protein FAM122A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.32517.32517.3 20.02 20.02 1.19 9 1 1 0 1095.2321 3203.7088 S267s TMT10 261 (K) VSTTTDsPVSPAQAASPFIPLDELSSK (-) VS(0.0)T(0.0)T(0.0)T(0.0)DS(0.99)PVS(0.0)PAQAAS(0.0)PFIPLDELS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S FAM122A 30813.8 3 10 509.1 287.77 HUMAN 1 4.1787 35.3091 KVSVQNGSIHQKDAV-p Q7Z739;S23-p KVSVQNGSIHQKDAV 0.718243489759715 0.235665416510418 0.056 0.184333333333333 2.71261131285196 8.26596254229893 0.056 0.184333333333333 0.535474592138988 0.149074631943 0.66141049058916 1.68071778504319 Q7Z739 YTHDF3 Q7Z739.S23.p_YTHDF3 Q7Z739_S23s _1_1_23_23 Q7Z739 Q7Z739|S4R373 YTH domain-containing family protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8595.8595.2 14.08 14.08 4.764 2 1 1 0 867.9713 1654.9641 S23s TMT10 17 (K) VSVQNGsIHQK (D) VS(0.0)VQNGS(0.99)IHQK K:TMT10,s:Phosphorylated S YTHDF3 63974.2 3 3 1868.1 109.97 HUMAN 1 2.7126 8.266 KVTENGGSPQGIKSP-p Q92766;S36-p KVTENGGSPQGIKSP 0.337362550356468 0.225870754095915 -0.287 0.142666666666667 8.79355237445176 8.50929225514504 -0.287 0.142666666666667 0.132021530323189 0.140951848086406 -1.77262651505142 1.72283244398466 Q92766 RREB1 Q92766.S36.p_RREB1 Q92766_S36s_1_1_36_36 Q92766 Q92766-2|Q92766-3|Q92766-5|Q92766-6 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11619.11619.2 15.96 15.96 4.681 2 1 1 0 863.4438 1644.9321 N33n S36s TMT10 30 (K) VTEnGGsPQGIK (S) VT(0.0)EN(1.0)GGS(0.99)PQGIK K:TMT10,n:Deamidated,s:Phosphorylated S RREB1 184269.8 6 7 179.1 480.48 HUMAN 1 -8.7936 8.5093 KVTKAGGSAALSPSK-p Q92522;S27-p KVTKAGGSAALSPSK 0.78149643092872 0.73575025977309 0.0533333333333333 0.0446666666666667 2.05639600463496 1.83658939075858 0.0533333333333333 0.0446666666666667 0.622816915767817 0.655150476045508 0.521255430800888 0.472248354073702 Q92522 H1FX Q92522.S27.p_H1FX Q92522_S27sS31s_2_2_27_31 Q92522 Q92522 Histone H1x HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11312.11312.3 7.59 7.59 4.72 3 2 2 0 521.9254 1403.8259 S27s S31s TMT10 24 (K) AGGsAALsPSK (K) AGGS(0.99)AALS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S H1FX 22486.7 2 3 2494.1 81.23 HUMAN 1 2.0564 1.8366 KVTLTGDTEDEDSAS-p Q9UIF8;T2014-p KVTLTGDTEDEDSAS 0.485768497509106 0.0469473150246252 0.104666666666667 0.24 5.77786028523035 17.7710803151106 0.104666666666667 0.24 0.264371095993741 0.0167067497929822 1.24488831428456 3.41333395523614 Q9UIF8 BAZ2B Q9UIF8.T2014.p_BAZ2B Q9UIF8_T2014t _1_1_2014_2014 Q9UIF8 Q9UIF8|Q9UIF8-3|Q9UIF8-5|Q9UIF8-2|Q9UIF8-4 Bromodomain adjacent to zinc finger domain protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15216.15216.3 16.55 16.55 3.218 9 1 1 0 980.1622 2858.5086 T2014t TMT10 2007 (K) KVTLTGDtEDEDSASTSSSLK (R) KVT(0.0)LT(0.0)GDT(0.99)EDEDS(0.0)AS(0.0)T(0.0)S(0.0)S(0.0)S(0.0)LK K:TMT10,t:Phosphorylated T BAZ2B 242223.6 5 7 1765.1 116.68 HUMAN 1 5.7779 17.7711 KVTRSNMSPDKPVSV-p Q9Y6M7-13;S1109-p KVTRSNMSPDKPVSV 0.562587826775042 0.00120889514629424 -0.09 -1.15 4.60103178873442 48.0003650973026 -0.09 -1.15 0.346654483142677 1.58475996122471e-05 -1.03040985105484 -14.3892918413202 Q9Y6M7 SLC4A7 Q9Y6M7.13.S1109.p_SLC4A7 Q9Y6M7-13_S1109s _1_1_1109_1109 Q9Y6M7-13 Q9Y6M7-7|Q9Y6M7-8|Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-3|Q9Y6M7-5 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12640.12640.2 16.15 12.03 3.32 3 1 1 0 1028.5568 1976.1454 S1109s TMT10 1106 (R) SNMsPDKPVSVK (I) S(0.0)NMS(0.99)PDKPVS(0.0)VK K:TMT10,s:Phosphorylated S SLC4A7 128884.6 6 17 207.1 445.25 HUMAN 1 -4.601 -48.0004 KVTSPLQSPTKAKPK-p E9PKC0;S907-p KVTSPLQSPTKAKPK 0.406507079477698 0.00177043297676807 -0.161 -0.983666666666667 7.22003305314594 43.4451281132593 -0.161 -0.983666666666667 0.189669148587714 4.52363117800013e-05 -1.49947653209499 -11.7950012925853 E9PKC0 PLEKHA7 E9PKC0.S907.p_PLEKHA7 E9PKC0_S907s _1_1_907_907 E9PKC0 E9PKC0|Q6IQ23-2|Q6IQ23-3 Pleckstrin homology domain-containing family A member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14619.14619.2 12.23 12.23 1.893 4 1 1 0 798.4444 1515.9147 S907s TMT10 901 (K) VTSPLQsPTK (A) VT(0.0)S(0.0)PLQS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S PLEKHA7 144991.9 5 10 809.1 221.2 HUMAN 1 -7.22 -43.4451 KVVEAVNSDSDSEFG-p Q02880;S1522-p KVVEAVNSDSDSEFG 0.936006892360374 0.0902852881611393 -0.012 0.232333333333333 0.563450636468599 13.8159924866117 -0.012 0.232333333333333 0.878324377064697 0.0415337124030644 -0.160479340407628 2.65762725112377 Q02880 TOP2B Q02880.S1522.p_TOP2B Q02880_S1522s _1_1_1522_1522 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21548.21548.3 20.58 14.58 1.272 3 1 1 0 896.8059 2608.4437 S1522s TMT10 1516 (K) VVEAVNsDSDSEFGIPKK (T) VVEAVNS(0.99)DS(0.0)DS(0.0)EFGIPKK K:TMT10,s:Phosphorylated S TOP2B 184233.7 13 43 71.1 658.36 HUMAN 1 -0.5635 13.816 KVVFPPGSPIPLRRT-p A0A1B0GTU4;S671-p KVVFPPGSPIPLRRT 0.770856722813785 0.240505705960235 0.0426666666666667 -0.206666666666667 2.1663277518768 8.15401699903494 0.0426666666666667 -0.206666666666667 0.607249582393573 0.152967193981866 0.545329375456265 -1.66133105526484 A0A1B0GTU4 NotFound A0A1B0GTU4.S671.p_NotFound A0A1B0GTU4_S671s _1_1_671_671 A0A1B0GTU4 A0A1B0GTU4 Paxillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22163.22163.3 14.44 14.44 99 1 1 1 0 582.0011 1664.0209 S671s TMT10 665 (K) VVFPPGsPIPLRR (T) VVFPPGS(1.0)PIPLRR s:Phosphorylated S PXN 117843.4 2 14 288.1 382.57 HUMAN 1 2.1663 -8.154 KVVHVNGYGKITGKN-p P09622;Y153-p KVVHVNGYGKITGKN 0.106843101544198 0.00505854978446637 0.303666666666667 0.529333333333333 20.448676325854 33.4609300159679 0.303666666666667 0.529333333333334 0.00901845966860825 0.000450720175144304 3.97590965157415 7.54444518908154 P09622 DLD P09622.Y153.p_DLD P09622_Y153y _1_1_153_153 P09622 P09622|E9PEX6|P09622-2 Dihydrolipoyl dehydrogenase, mitochondrial GG20160819_MSz_CCLE_T4D7_pY_Injection_02.10527.10564.3 13.33 13.33 99 1 1 1 0 504.278 1430.852 Y153y TMT10 147 (K) VVHVNGyGK (I) VVHVNGY(1.0)GK K:TMT10,y:Phosphorylated Y DLD 54746.8 2 1 261.1 13.33 HUMAN 1 20.4487 33.4609 KVVPCLVTPVTGREN-p O75369-8;T994-p KVVPCLVTPVTGREN 0.885820345057877 0.545474470168617 0.0326666666666667 -0.119 1.03650357536437 3.53971202237841 0.0326666666666667 -0.119 0.787679680852092 0.442617721059873 0.283010065972023 -0.827926122977711 O75369 FLNB O75369.8.T994.p_FLNB O75369-8_T994t _1_1_994_994 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22374.22374.3 10 10 5.147 2 1 1 0 536.2927 1526.8926 T994t TMT10 988 (K) VVPCLVtPVTGR (E) VVPCLVT(0.99)PVT(0.0)GR C:Carbamidomethylation,t:Phosphorylated T FLNB 283797.6 1 18 67.1 680.07 HUMAN 1 1.0365 -3.5397 KVVRRHRSIHEVDIS-p Q5VTI5;S887-p KVVRRHRSIHEVDIS 0.577114205340763 0.66590591410081 0.088 0.051 4.39205519486272 2.41709293459139 0.088 0.051 0.363742862773637 0.573179575568982 0.991367893650312 0.599234553028653 Q5VTI5 NotFound Q5VTI5.S887.p_NotFound Q5VTI5_S887s _1_1_887_887 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21904.21904.5 27.72 28.26 5.167 4 1 1 0 748.7612 3659.8048 S887s Hydrogen 887 (R) sIHEVDISNLEAALRAEEPGGHAYETPREEIAR (L) S(0.99)IHEVDIS(0.0)NLEAALRAEEPGGHAY(0.0)ET(0.0)PREEIAR s:Phosphorylated S PLEKHA6 119745.7 11 29 52.1 743.36 HUMAN 1 4.3921 2.4171 KVVTNARSPGAKCYG-p Q9NWH9;S421-p KVVTNARSPGAKCYG 0.863601860466773 0.131211332879024 -0.026 0.177333333333333 1.24101544031933 11.6277311667994 -0.026 0.177333333333333 0.751447174776161 0.0687427470811951 -0.333287891517799 2.26538382710052 Q9NWH9 SLTM Q9NWH9.S421.p_SLTM Q9NWH9_S421s _1_1_421_421 Q9NWH9 Q9NWH9 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6963.6963.4 13.75 13.75 2.075 2 1 1 0 410.2336 1557.9477 S421s TMT10 415 (K) VVTNARsPGAK (C) VVT(0.0)NARS(0.99)PGAK K:TMT10,s:Phosphorylated S SLTM 117431.6 6 8 167.1 494.15 HUMAN 1 -1.241 11.6277 KVVTNARSPGARCYG-p Q15424;S443-p KVVTNARSPGARCYG 0.443826735502419 0.841584514844592 0.110333333333333 0.0223333333333334 6.50109669873426 1.05312397554448 0.110333333333333 0.0223333333333334 0.223815587864256 0.784671000481844 1.37336793167633 0.287122954250353 Q15424 SAFB Q15424.S443.p_SAFB Q15424_S443s _1_1_443_443 Q15424 Q14151|Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.4332.4540.3 13.71 13.71 3.543 2 1 1 0 479.5906 1356.7909 S443s TMT10 437 (K) VVTNARsPGAR (C) VVT(0.0)NARS(0.99)PGAR s:Phosphorylated S SAFB 103096.3 12 30 83.1 629.62 HUMAN 1 6.5011 1.0531 KVVYENAYGQFIGPH-p Q16881;Y281-p KVVYENAYGQFIGPH 0.574247698827796 0.526103983824314 -0.0946666666666667 0.0846666666666667 4.43404523016218 3.74759855584513 -0.0946666666666666 0.0846666666666667 0.360242938895133 0.421929746234897 -0.999240444972877 0.868424135420451 Q16881 TXNRD1 Q16881.Y281.p_TXNRD1 Q16881_Y281y _1_1_281_281 Q16881 Q16881|A0A087WSY9|Q16881-6|Q16881-3|A0A182DWI3|Q16881-4|A0A087WSW9|Q16881-2|Q16881-5|F8W809|E9PIR7|Q16881-7|E2QRB9 Thioredoxin reductase 1, cytoplasmic GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16924.16971.3 23.83 23.83 9.295 2 1 1 0 806.091 2336.2916 Y281y TMT10 274 (K) KVVYENAyGQFIGPHR (I) KVVY(0.0)ENAY(0.99)GQFIGPHR K:TMT10,y:Phosphorylated Y TXNRD1 71861 3 1 136.1 23.83 HUMAN 1 -4.434 3.7476 KVWYHVCSSRGKGCY-p Q92499;S632-p KVWYHVCSSRGKGCY 0.566691167495734 0.156013196579108 0.140333333333333 0.188666666666667 4.54315501648124 10.6102088418271 0.140333333333333 0.188666666666667 0.351305135375809 0.0868918644062674 1.019631176088 2.08705057259159 Q92499 DDX1 Q92499.S632.p_DDX1 Q92499_S632s _1_1_632_632 Q92499 Q92499 ATP-dependent RNA helicase DDX1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12985.12985.3 14.7 14.7 1.203 3 1 1 0 501.5657 1422.715 S632s TMT10 626 (K) VWYHVCsSR (G) VWY(0.0)HVCS(0.99)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S DDX1 83400.6 1 4 2710.1 73.19 HUMAN 1 4.5432 10.6102 KWAHDKFSGEEGEIE-p Q9Y2W1;S928-p KWAHDKFSGEEGEIE 0.581313504479002 0.037181956533719 -0.123666666666667 0.418 4.33394536163025 19.217747331938 -0.123666666666667 0.418 0.368642551941578 0.0119736143683848 -0.980449186712843 3.70974588192142 Q9Y2W1 THRAP3 Q9Y2W1.S928.p_THRAP3 Q9Y2W1_S928s _1_1_928_928 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13853.14482.4 21.61 19.19 8.962 3 1 1 0 948.4401 3710.7661 S928s TMT10 922 (K) WAHDKFsGEEGEIEDDESGTENREEK (D) WAHDKFS(0.99)GEEGEIEDDES(0.0)GT(0.0)ENREEK K:TMT10,s:Phosphorylated S THRAP3 108720.9 8 86 10.2 1293.04 HUMAN 1 -4.3339 19.2177 KWCEYGLTFTEKWNT-p P45880-1;T96-p KWCEYGLTFTEKWNT 0.25414491835742 0.00390851163108543 -0.334 0.632 11.3268111335132 35.5346713044466 -0.334 0.632 0.0736747866109655 0.000279597233259407 -2.21346605047677 8.29314209581459 P45880 VDAC2 P45880.1.T96.p_VDAC2 P45880-1_T96t _1_1_96_96 P45880-1 P45880-1|P45880-2 Isoform 1 of Voltage-dependent anion-selective channel protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26185.26185.3 13.34 13.34 3.151 3 1 1 0 657.9824 1891.9664 T96t TMT10 90 (K) WCEYGLtFTEK (W) WCEY(0.0)GLT(0.99)FT(0.0)EK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T VDAC2 33884.5 1 4 1760.1 117.1 HUMAN 1 -11.3268 35.5347 KWDSESNSERDVTKN-p P30414;S891-p KWDSESNSERDVTKN 0.229977783899196 0.461640703896171 -0.191333333333333 0.188666666666667 12.2657677001328 4.47736649299112 -0.191333333333333 0.188666666666667 0.0593503425621314 0.356667346449391 -2.37956499651274 1.00716177603014 P30414 NKTR P30414.S891.p_NKTR P30414_S891s _1_1_891_891 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11224.11224.4 11.07 11.07 1.261 6 1 1 0 735.864 2860.468 S891s TMT10 879 (K) NYAGSKWDSESNsERDVTK (N) NY(0.0)AGS(0.0)KWDS(0.0)ES(0.0)NS(0.99)ERDVT(0.0)K K:TMT10,s:Phosphorylated S NKTR 166700.6 1 19 202.1 449.45 HUMAN 1 -12.2658 4.4774 KWGREDKSDQSDDEK-p Q8WVC0;S151-p KWGREDKSDQSDDEK 0.0350618685416583 0.00356137322963082 -1.24233333333333 1.77366666666667 33.8724853831873 36.4870557473482 -1.24233333333333 1.77366666666667 0.000409969418284203 0.000224540365512118 -7.70251980211743 8.65810742702218 Q8WVC0 LEO1 Q8WVC0.S151.p_LEO1 Q8WVC0_S151s _1_1_151_151 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7896.7896.4 8.57 3.05 2.069 2 1 1 0 616.3007 2382.214 S151s TMT10 145 (K) WGREDKsDQSDDEK (I) WGREDKS(0.99)DQS(0.0)DDEK K:TMT10,s:Phosphorylated S LEO1 75516.9 2 2 514.1 286.88 HUMAN 1 -33.8725 36.4871 KWKDRRKSYTSDLQK-p Q8WWI1-3;S417-p KWKDRRKSYTSDLQK 0.039271926938295 0.311283950191702 -0.539333333333333 0.221666666666667 31.8587092604824 6.6985820085951 -0.539333333333333 0.221666666666667 0.000651822089249915 0.213866025790287 -7.01818816950709 1.40776913191204 Q8WWI1 LMO7 Q8WWI1.3.S417.p_LMO7 Q8WWI1-3_S417s _1_1_417_417 Q8WWI1-3 Q8WWI1|Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12663.12663.2 10.13 2.73 2.188 4 1 1 0 740.3792 1399.7833 S417s TMT10 417 (K) sYTSDLQK (K) S(0.99)Y(0.0)T(0.0)S(0.0)DLQK K:TMT10,s:Phosphorylated S LMO7 154694.3 2 9 61.1 704.74 HUMAN 1 -31.8587 6.6986 KWKGPPGSADKAGKR-p P42285;S40-p KWKGPPGSADKAGKR 0.0812570195389155 0.00467870161771937 -0.493666666666667 -0.98 23.2964568942994 34.0763041154494 -0.493666666666667 -0.98 0.00468116889458002 0.000391173646427159 -4.62486141936265 -7.76028254698586 P42285 SKIV2L2 P42285.S40.p_SKIV2L2 P42285_S40s _1_1_40_40 P42285 P42285|D6REC7 Superkiller viralicidic activity 2-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12228.12438.3 11.68 11.68 99 1 1 1 0 604.0007 1730.0204 S40s TMT10 34 (K) WKGPPGsADK (A) WKGPPGS(1.0)ADK K:TMT10,s:Phosphorylated S SKIV2L2 118829.6 1 1 4557.1 29.88 HUMAN 1 -23.2965 -34.0763 KWKKQKRSPRPPRHM-p Q92538-3;S233-p KWKKQKRSPRPPRHM 0.959278687747033 0.949643417161141 -0.00766666666666666 0.00700000000000002 0.349888001535048 0.321257540543407 -0.00766666666666667 0.00700000000000003 0.922595219286667 0.9286974347609 -0.101781661864888 0.0937199946644588 Q92538 GBF1 Q92538.3.S233.p_GBF1 Q92538-3_S233s_1_1_233_233 Q92538-3 Q92538|Q92538-2|Q92538-3 Isoform 3 of Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3078.3078.4 8.51 8.51 99 1 1 1 0 354.1972 1350.828 Q230q S233s Hydrogen 230 (K) qKRsPRPPR (H) Q(1.0)KRS(1.0)PRPPR K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S GBF1 208066.7 11 2 543.1 276.05 HUMAN 1 -0.3499 0.3213 KWNRLLMSLEELIKW-p P46939;S2567-p KWNRLLMSLEELIKW 0.336373364158747 0.012261563682622 0.150333333333333 0.383666666666667 8.82089699569274 26.6873379128158 0.150333333333333 0.383666666666667 0.131192890406955 0.00214420452762819 1.77735982188229 5.47677309617798 P46939 UTRN P46939.S2567.p_UTRN P46939_S2567s _1_1_2567_2567 P46939 P46939-2|P46939-4|Q5T097 Utrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.37360.37360.2 12.38 7.04 99 1 1 1 0 863.994 1647.0167 S2567s TMT10 2564 (R) LLMsLEELIK (W) LLMS(1.0)LEELIK K:TMT10,s:Phosphorylated S UTRN 396684.3 1 12 527.1 282.18 HUMAN 1 8.8209 26.6873 KWQEHRRSLELSSLA-p Q13615;S647-p KWQEHRRSLELSSLA 0.610247631511631 0.4327885548442 -0.0933333333333334 -0.167666666666667 3.97421201145811 4.84555610630309 -0.0933333333333334 -0.167666666666667 0.400478124917199 0.327675815817576 -0.912197003901555 -1.07546626459096 Q13615 MTMR3 Q13615.S647.p_MTMR3 Q13615_S647s _1_1_647_647 Q13615 Q13615|Q13615-2|Q13615-3|G5E953 Myotubularin-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26477.26477.4 21.62 19.16 2.213 6 1 1 0 759.6478 2955.6039 S647s TMT10 647 (R) sLELSSLAGPGEDPLSADSLGKPTR (V) S(0.99)LELS(0.0)S(0.0)LAGPGEDPLS(0.0)ADS(0.0)LGKPT(0.0)R K:TMT10,s:Phosphorylated S MTMR3 136241 3 7 913.1 201.43 HUMAN 1 -3.9742 -4.8456 KWRMMSLSQSRSSKS-p O43353;S176-p KWRMMSLSQSRSSKS 0.968694920162631 0.36708239185726 0.00666666666666665 -0.0913333333333333 0.271165168542967 5.77189568650956 0.00666666666666664 -0.0913333333333333 0.939471226041547 0.264734432599944 0.0795276923276839 -1.24353469713109 O43353 RIPK2 O43353.S176.p_RIPK2 O43353_S176s _1_1_176_176 O43353 O43353|O43353-2 Receptor-interacting serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13202.13202.2 8.58 8.58 1.5 3 1 1 0 624.7895 1168.6016 S176s TMT10 172 (R) MMSLsQSR (S) MMS(0.0)LS(0.99)QS(0.0)R s:Phosphorylated S RIPK2 61764.4 1 2 1914.1 107.79 HUMAN 1 0.2712 -5.7719 KWSKKFFSFIEGCLV-p A0A0D9SEY1;S264-p KWSKKFFSFIEGCLV 0.806595725807555 0.143343715679587 0.0476666666666667 -0.182666666666667 1.79843414523231 11.1121620271852 0.0476666666666667 -0.182666666666667 0.660931704894408 0.0774076347188113 0.463686217569056 -2.17477888006367 A0A0D9SEY1 NotFound A0A0D9SEY1.S264.p_NotFound A0A0D9SEY1_S264s _1_1_264_264 A0A0D9SEY1 O95819-3|A0A0D9SEY1|O95819-6|E7EN19|O95819-5|G5E948|O95819-2|O95819-4|G3XAA2 Mitogen-activated protein kinase kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.35200.35200.3 7.1 7.1 99 1 1 1 0 748.0828 2162.2651 S264s TMT10 261 (K) KFFsFIEGCLVK (N) KFFS(1.0)FIEGCLVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MAP4K4 151879.6 1 2 131.2 535.29 HUMAN 1 1.7984 -11.1122 KYAANRKSTGQLNLS-p O94915;S1914-p KYAANRKSTGQLNLS 0.404577762556746 0.531234750031079 0.146 -0.065 7.25656980014313 3.69374667441585 0.146 -0.065 0.188080174903627 0.427194185145055 1.50585387461318 -0.857979469927821 O94915 FRYL O94915.S1914.p_FRYL O94915_S1914s _1_1_1914_1914 O94915 O94915 Protein furry homolog-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23146.23146.2 17.63 17.63 1.389 11 1 1 0 1470.7021 2860.4274 S1914s TMT10 1914 (K) sTGQLNLSTSPINSSSYLGYNSNAR (S) S(0.99)T(0.0)GQLNLS(0.0)T(0.0)S(0.0)PINS(0.0)S(0.0)S(0.0)Y(0.0)LGY(0.0)NS(0.0)NAR s:Phosphorylated S FRYL 342387.4 10 6 526.1 282.44 HUMAN 1 7.2566 -3.6937 KYAGKDGYNYTLSKT-p P31949;Y30-p KYAGKDGYNYTLSKT 0.253976039397857 0.308747165050699 0.322666666666667 -0.298666666666667 11.3394988046276 6.74597361449418 0.322666666666667 -0.298666666666667 0.0734598639253704 0.211544938424184 2.2156970785987 -1.41609268835677 P31949 S100A11 P31949.Y30.p_S100A11 P31949_Y30y _1_1_30_30 P31949 P31949 Protein S100-A11 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.15285.15285.2 16.49 10.23 3.446 4 1 1 0 799.8982 1518.8204 Y30y TMT10 28 (K) DGyNYTLSK (T) DGY(0.99)NY(0.0)T(0.0)LS(0.0)K K:TMT10,y:Phosphorylated Y S100A11 11854.4 3 1 88.1 30.67 HUMAN 1 11.3395 -6.746 KYCILTDSQLVLLNK-p Q9UJF2-2;S100-p KYCILTDSQLVLLNK 0.631856035213855 0.408304734094052 -0.0863333333333333 0.135333333333333 3.71273791792686 5.17772571967631 -0.0863333333333334 0.135333333333333 0.425330188151403 0.303548036533195 -0.861804852825209 1.13629311791731 Q9UJF2 RASAL2 Q9UJF2.2.S100.p_RASAL2 Q9UJF2-2_S100s _1_1_100_100 Q9UJF2-2 Q9UJF2-2 Isoform 2 of Ras GTPase-activating protein nGAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31075.31075.3 8.58 8.58 2.656 3 1 1 0 740.0705 2138.2295 S100s TMT10 94 (K) YCILTDsQLVLLNK (E) Y(0.0)CILT(0.0)DS(0.99)QLVLLNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RASAL2 145265.6 1 29 281.2 388.28 HUMAN 1 -3.7127 5.1777 KYDLDFKSPDDPSRY-p P06733;S263-p KYDLDFKSPDDPSRY 0.746396283671232 0.955031799985123 -0.058 0.00733333333333335 2.41195400115827 0.28505713101303 -0.058 0.00733333333333337 0.573858210733244 0.936470900630466 -0.598215922791537 0.0834726997943217 P06733 ENO1 P06733.S263.p_ENO1 P06733_S263s _1_1_263_263 P06733 P06733|P06733-2 Alpha-enolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27147.27147.5 24.78 16.93 2.622 7 1 1 0 846.8441 4150.2154 S263s TMT10 254 (R) SGKYDLDFKsPDDPSRYISPDQLADLYK (S) S(0.0)GKY(0.0)DLDFKS(0.99)PDDPS(0.0)RY(0.0)IS(0.0)PDQLADLY(0.0)K K:TMT10,s:Phosphorylated S ENO1 47510.4 7 9 623.1 259.34 HUMAN 1 -2.412 0.2851 KYEKSLYSMIKNDTS-p P08133;S303-p KYEKSLYSMIKNDTS 0.329581403179176 0.00624307420965409 -0.382 0.772666666666667 9.00979157906039 31.7658859393403 -0.382 0.772666666666667 0.125609024289201 0.000665903666375772 -1.81005788001658 6.97599427433214 P08133 ANXA6 P08133.S303.p_ANXA6 P08133_S303s _1_1_303_303 P08133 P08133|P08133-2|E5RK69 Annexin A6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25500.25500.2 10.73 3.1 4.412 3 1 1 0 690.3744 1299.7747 S303s TMT10 300 (K) SLYsMIK (N) S(0.0)LY(0.0)S(0.99)MIK K:TMT10,s:Phosphorylated S ANXA6 76214.3 1 4 1878.1 109.53 HUMAN 1 -9.0098 31.7659 KYELHLKSFEKAKES-p Q02790;S251-p KYELHLKSFEKAKES 0.634089116322804 0.654478937803196 -0.135333333333333 0.048 3.68401380259433 2.51669074541891 -0.135333333333333 0.048 0.428152633595628 0.560184290390708 -0.85622516340959 0.62033361341964 Q02790 FKBP4 Q02790.S251.p_FKBP4 Q02790_S251s _1_1_251_251 Q02790 Q02790 Peptidyl-prolyl cis-trans isomerase FKBP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18951.18951.4 12.33 12.33 6.501 2 1 1 0 516.0419 1981.1726 S251s TMT10 245 (K) YELHLKsFEK (A) Y(0.0)ELHLKS(0.99)FEK K:TMT10,s:Phosphorylated S FKBP4 52088.9 1 6 706.1 239.22 HUMAN 1 -3.684 2.5167 KYEPAAVSEQGDKKG-p P05023-4;S16-p KYEPAAVSEQGDKKG 0.599790417216858 0.993013139591743 -0.112 0.00100000000000003 4.10083585905723 0.0431201475347864 -0.112 0.00100000000000004 0.388970275146668 0.99012034672598 -0.936356042325247 0.0129637628361305 P05023 ATP1A1 P05023.4.S16.p_ATP1A1 P05023-4_S16s _1_1_16_16 P05023-4 P05023|P05023-4|P05023-2 Isoform 4 of Sodium/potassium-transporting ATPase subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8937.8937.3 17.81 13.24 7.472 2 1 1 0 811.4277 2352.3014 S16s Hydrogen 8 (R) DKYEPAAVsEQGDKK (G) DKY(0.0)EPAAVS(0.99)EQGDKK K:TMT10-Lys-Only,s:Phosphorylated S ATP1A1 114310.4 6 2 1313.1 155.17 HUMAN 1 -4.1008 0.0431 KYEQGFITDPVVLSP-p P12268;T116-p KYEQGFITDPVVLSP 0.981575064370413 0.0137763487721158 -0.00600000000000001 -0.457 0.160648230670596 25.841632455474 -0.00600000000000001 -0.457 0.963685172634634 0.00260517411546441 -0.0476752981811027 -5.25329720873352 P12268 IMPDH2 P12268.T116.p_IMPDH2 P12268_T116t _1_1_116_116 P12268 P12268 Inosine-5'-monophosphate dehydrogenase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20501.20501.4 12.56 9.97 1.326 3 1 1 0 715.6456 2779.5961 T116t TMT10 109 (K) KYEQGFItDPVVLSPKDR (V) KY(0.0)EQGFIT(0.99)DPVVLS(0.0)PKDR K:TMT10,t:Phosphorylated T IMPDH2 56260.4 1 1 1929.1 106.46 HUMAN 1 -0.1606 -25.8416 KYESDEDSLGSSGRV-p O00418;S474-p KYESDEDSLGSSGRV 0.510211479336188 0.194694282046569 0.108 0.239333333333333 5.4001201677395 9.34349050790637 0.108 0.239333333333333 0.288395170410402 0.116319077492219 1.17690308071244 1.86714081866189 O00418 EEF2K O00418.S474.p_EEF2K O00418_S474s _1_1_474_474 O00418 O00418 Eukaryotic elongation factor 2 kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7138.7138.2 16.95 10.92 3.579 5 1 1 0 1034.4853 1987.9973 S474s TMT10 467 (R) KYESDEDsLGSSGR (V) KY(0.0)ES(0.0)DEDS(0.99)LGS(0.0)S(0.0)GR K:TMT10,s:Phosphorylated S EEF2K 82713.2 6 7 995.1 190.99 HUMAN 1 5.4001 9.3435 KYFPSRVSIKESSVA-p S4R3N1;S183-p KYFPSRVSIKESSVA 0.102728705875057 0.141296556669555 -0.609 -0.170333333333333 20.8901401004121 11.1981245821876 -0.609 -0.170333333333333 0.00814678002645029 0.0758905223012725 -4.07264196978107 -2.18984820331239 S4R3N1 HSPE1-MOB4 S4R3N1.S183.p_HSPE1-MOB4 S4R3N1_S183s _1_1_183_183 S4R3N1 S4R3N1|Q9Y3A3|Q9Y3A3-3|Q9Y3A3-2|B4DM50 HSPE1-MOB4 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16955.16955.4 9.74 9.74 9.742 5 1 1 0 617.1001 2385.4109 S183s TMT10 177 (K) YFPSRVsIKESSVAK (L) Y(0.0)FPS(0.0)RVS(0.99)IKES(0.0)S(0.0)VAK K:TMT10,s:Phosphorylated S HSPE1-MOB4 30249.8 2 5 2805.1 70.03 HUMAN 1 -20.8901 -11.1981 KYFPSSLSPVTPSES-p Q9P0U4-2;S224-p KYFPSSLSPVTPSES 0.38526971329313 0.049278153336113 0.12 0.241 7.66809023501809 17.487617417542 0.12 0.241 0.171076744196354 0.0178335686633168 1.57752452524874 3.35665104239688 Q9P0U4 CXXC1 Q9P0U4.2.S224.p_CXXC1 Q9P0U4-2_S224s _1_1_224_224 Q9P0U4-2 Q9P0U4-2|K7EQ21 Isoform 2 of CXXC-type zinc finger protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22771.22771.4 17.47 17.47 1.657 7 1 1 0 607.314 2346.2655 S224s TMT10 218 (K) YFPSSLsPVTPSESLPRPR (R) Y(0.0)FPS(0.0)S(0.0)LS(0.99)PVT(0.0)PS(0.0)ES(0.0)LPRPR s:Phosphorylated S CXXC1 78108.7 2 5 1791.1 114.51 HUMAN 1 7.6681 17.4876 KYFRVQDSPGRLSPF-p Q68DQ2;S2272-p KYFRVQDSPGRLSPF 0.305627585854732 0.0303239708351728 0.272333333333333 -0.342 9.65098158745064 20.5279815061257 0.272333333333333 -0.342 0.108368195377624 0.00885527085398508 1.92113259580483 -3.98932887744293 Q68DQ2 CRYBG3 Q68DQ2.S2272.p_CRYBG3 Q68DQ2_S2272s_1_1_2272_2272 Q68DQ2 Q68DQ2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21927.21927.4 14.1 13.11 1.795 2 1 1 0 610.8226 2359.3022 S2272s N2282n TMT10 2269 (R) VQDsPGRLSPFIEnVDK (Q) VQDS(0.99)PGRLS(0.0)PFIEN(1.0)VDK K:TMT10,s:Phosphorylated S,n:Deamidated CRYBG3 333308.2 2 14 582.1 265.87 HUMAN 1 9.651 -20.528 KYGEHEASPDNGQNE-p P46939;S10-p KYGEHEASPDNGQNE 0.755470609501715 0.251816219768834 -0.044 0.140666666666667 2.32825968792264 7.88676339856632 -0.044 0.140666666666667 0.58502446915891 0.162676065565425 -0.58032991910668 1.61500649064988 P46939 UTRN P46939.S10.p_UTRN P46939_S10s_1_1_10_10 P46939 P46939 Utrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19757.19757.3 14.98 14.98 0.926 3 1 1 0 930.4321 2708.3204 S10s N16n TMT10 4 (K) YGEHEAsPDNGQnEFSDIIK (S) Y(0.0)GEHEAS(0.99)PDN(0.50)GQN(0.50)EFS(0.0)DIIK K:TMT10,s:Phosphorylated S,n:Deamidated UTRN 396684.3 1 1 527.1 282.18 HUMAN 1 -2.3283 7.8868 KYGKSLYYYIQQDTK-p P07355-2;Y335-p KYGKSLYYYIQQDTK 0.539914690322165 0.124594446351603 -0.109666666666667 0.327333333333333 4.94212983325312 11.9314827356231 -0.109666666666667 0.327333333333333 0.320469731631384 0.0640990696990517 -1.09344233436661 2.31903808028342 P07355 ANXA2 P07355.2.Y335.p_ANXA2 P07355-2_Y335y _1_1_335_335 P07355-2 P07355-2|A6NMY6 Isoform 2 of Annexin A2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.28570.28570.3 20.43 20.43 1.109 6 1 1 0 927.4757 2700.4488 Y335y TMT10 332 (K) SLYyYIQQDTKGDYQK (A) S(0.0)LY(0.0)Y(0.99)Y(0.0)IQQDT(0.0)KGDY(0.0)QK K:TMT10,y:Phosphorylated Y ANXA2 40695.7 1 5 8.1 109.57 HUMAN 1 -4.9421 11.9315 KYGYTHLSTGDLLRS-p Q5T9B7;S54-p KYGYTHLSTGDLLRS 0.421261047991938 0.321782690284476 0.141333333333333 0.130666666666667 6.91368986428749 6.50976972805675 0.141333333333333 0.130666666666667 0.203531209563681 0.22336906546028 1.4458964621844 1.37454404323802 Q5T9B7 AK1 Q5T9B7.S54.p_AK1 Q5T9B7_S54s _1_1_54_54 Q5T9B7 Q5T9B7|P00568 Adenylate kinase isoenzyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19899.19899.3 18.21 18.21 1.213 5 1 1 0 602.2987 1724.9169 S54s TMT10 48 (K) YGYTHLsTGDLLR (S) Y(0.0)GY(0.0)T(0.0)HLS(0.99)T(0.0)GDLLR s:Phosphorylated S AK1 23638.6 2 1 3153.1 59.14 HUMAN 1 6.9137 6.5098 KYIKEFGSLPTTPSE-p O15400;S75-p KYIKEFGSLPTTPSE 0.639390011721994 0.759559061505798 -0.064 0.06 3.6270326455657 1.6496149941221 -0.063333690133494 0.06 0.433807179640775 0.683972279337976 -0.8451295539341 0.429681569218479 O15400 STX7 O15400.S75.p_STX7 O15400_S75s _1_1_75_75 O15400 O15400|O15400-2 Syntaxin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16123.16123.3 10.55 10.55 2.343 4 1 1 0 586.6139 1677.8645 S75s TMT10 72 (K) EFGsLPTTPSEQR (Q) EFGS(0.99)LPT(0.0)T(0.0)PS(0.0)EQR s:Phosphorylated S STX7 29929.1 1 3 1215.1 165.8 HUMAN 1 -3.627 1.6496 KYIPASKTPVGGDRK-p Q96C24;T511-p KYIPASKTPVGGDRK 0.610139807926776 0.965986453315642 -0.0773333333333333 0.00700000000000002 3.97556401149521 0.214482568174193 -0.0773333333333334 0.00700000000000003 0.400353471670994 0.951813243319909 -0.912455768803001 0.0632769804495502 Q96C24 SYTL4 Q96C24.T511.p_SYTL4 Q96C24_T511t _1_1_511_511 Q96C24 Q96C24 Synaptotagmin-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12603.12603.3 9.05 3.97 1.65 3 1 1 0 633.676 1819.0478 T511t TMT10 505 (K) YIPASKtPVGGDR (K) Y(0.0)IPAS(0.0)KT(0.99)PVGGDR K:TMT10,t:Phosphorylated T SYTL4 76649.8 1 8 1078.1 180.34 HUMAN 1 -3.9756 0.2145 KYIQKQISYNYSDLD-p Q8NC51;S243-p KYIQKQISYNYSDLD 0.215102413706098 0.0610978865507037 -0.331666666666667 0.375666666666667 12.8610227096311 16.1698590439234 -0.331666666666667 0.375666666666667 0.0517484956313165 0.0241553923272581 -2.48605386120842 3.0986549260833 Q8NC51 SERBP1 Q8NC51.S243.p_SERBP1 Q8NC51_S243s_1_1_243_243 Q8NC51 Q8NC51|Q8NC51-2 Plasminogen activator inhibitor 1 RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16294.16294.4 20.43 20.43 1.186 8 1 1 0 1079.4935 4233.9737 S243s N253n TMT10 241 (K) QIsYNYSDLDQSnVTEETPEGEEHHPVADTENK (E) QIS(0.99)Y(0.0)N(0.0)Y(0.0)S(0.0)DLDQS(0.0)N(0.99)VT(0.0)EET(0.0)PEGEEHHPVADT(0.0)EN(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated SERBP1 45021.6 1 9 616.1 261.14 HUMAN 1 -12.861 16.1699 KYISENESPRPSQKK-p O94782;S327-p KYISENESPRPSQKK 0.584653564343206 0.00106814256462013 -0.0796666666666667 -1.10933333333333 4.29114735369261 50.2782402042194 -0.0796666666666667 -1.10933333333333 0.372293337847207 9.37941991488818e-06 -0.972389425272057 -15.8822514996697 O94782 USP1 O94782.S327.p_USP1 O94782_S327s _1_1_327_327 O94782 O94782 Ubiquitin carboxyl-terminal hydrolase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8449.8449.3 8.57 8.57 2.169 4 1 1 0 691.6884 1993.0755 S327s TMT10 321 (K) YISENEsPRPSQK (K) Y(0.0)IS(0.0)ENES(0.99)PRPS(0.0)QK K:TMT10,s:Phosphorylated S USP1 89232.6 3 4 1052.1 182.92 HUMAN 1 -4.2911 -50.2782 KYKEESDSD______-p Q9P2C4;S611-p KYKEESDSD______ 0.0782221681558717 0.00236141213192833 0.546666666666667 0.899333333333333 23.6459400179526 40.3443605368673 0.546666666666667 0.899333333333334 0.00431922669076587 9.23770196018406e-05 4.70880883306555 10.2873433623127 Q9P2C4 TMEM181 Q9P2C4.S611.p_TMEM181 Q9P2C4_S611s _1_1_611_611 Q9P2C4 Q9P2C4 Transmembrane protein 181 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6816.6816.2 9.97 9.97 3.362 3 1 1 0 755.8399 1430.7051 S611s TMT10 605 (K) YKEESDsD (-) Y(0.0)KEES(0.0)DS(0.99)D K:TMT10,s:Phosphorylated S TMEM181 70007.9 3 1 4444.1 31.33 HUMAN 1 23.6459 40.3444 KYKHDYVSH______-p Q12888-2;S1976-p KYKHDYVSH______ 0.716999917374189 0.0276242665589748 -0.049 0.364 2.72611920202985 21.1355647026203 -0.049 0.364 0.533811689483147 0.00769916327488431 -0.664213044414212 4.12286401764607 Q12888 TP53BP1 Q12888.2.S1976.p_TP53BP1 Q12888-2_S1976s _1_1_1976_1976 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5028.5028.2 16.5 16.5 7.847 3 1 1 0 793.8921 1506.8105 S1976s TMT10 1970 (K) YKHDYVsH (-) Y(0.0)KHDY(0.0)VS(0.99)H K:TMT10,s:Phosphorylated S TP53BP1 216167.2 4 79 3.1 2297.07 HUMAN 1 -2.7261 21.1356 KYKILDATDQESLEL-p Q8IZA0;T974-p KYKILDATDQESLEL 0.955750339780897 0.344593222693804 0.00999999999999999 0.110333333333333 0.386160143895489 6.12980044352068 0.00999999999999998 0.110333333333333 0.914921820819566 0.243792283731935 0.111919345125746 1.3073363087278 Q8IZA0 KIAA0319L Q8IZA0.T974.p_KIAA0319L Q8IZA0_T974tS978s_2_2_974_978 Q8IZA0 Q8IZA0 Dyslexia-associated protein KIAA0319-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22465.22465.4 10.71 10.71 7.915 4 2 2 0 634.3215 2374.323 T974t S978s TMT10 970 (K) ILDAtDQEsLELKPTSR (A) ILDAT(0.99)DQES(0.99)LELKPT(0.0)S(0.0)R K:TMT10,t:Phosphorylated T,s:Phosphorylated S KIAA0319L 116739.6 2 3 5399.1 19.7 HUMAN 1 0.3862 6.1298 KYLLSQSSPAPLTAA-p Q12792-3;S143-p KYLLSQSSPAPLTAA 0.276113177838095 0.0196201486914483 -0.243333333333333 -0.354333333333333 10.5734903456775 23.4413185257003 -0.243333333333333 -0.354333333333333 0.0876296274705039 0.00452760100270843 -2.0815457454511 -4.65419407374646 Q12792 TWF1 Q12792.3.S143.p_TWF1 Q12792-3_S143s _1_1_143_143 Q12792-3 Q12792-3 Isoform 3 of Twinfilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24730.24730.3 18.69 18.69 1.163 5 1 1 0 914.492 2661.4864 S143s TMT10 136 (K) KYLLSQSsPAPLTAAEEELR (Q) KY(0.0)LLS(0.0)QS(0.0)S(0.99)PAPLT(0.0)AAEEELR K:TMT10,s:Phosphorylated S TWF1 41188.9 2 2 2118.1 96.9 HUMAN 1 -10.5735 -23.4413 KYLQDQLSPLTRQRE-p Q15025;S403-p KYLQDQLSPLTRQRE 0.657493781284077 0.678336961561224 0.0993333333333333 0.0476666666666667 3.41536198588795 2.30350824091865 0.0993333333333334 0.0476666666666667 0.455474220656513 0.588368178153857 0.80358498213713 0.574943648509653 Q15025 TNIP1 Q15025.S403.p_TNIP1 Q15025_S403s _1_1_403_403 Q15025 Q15025|Q15025-2|A0A0A0MRZ4|Q15025-3|Q15025-4|Q15025-6|Q15025-5|Q15025-8|Q15025-7|E7EMV7 TNFAIP3-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20790.20790.3 10.32 10.32 5.506 3 1 1 0 548.2847 1562.874 S403s TMT10 397 (K) YLQDQLsPLTR (Q) Y(0.0)LQDQLS(0.99)PLT(0.0)R s:Phosphorylated S TNIP1 72148.2 1 3 1578.1 130.12 HUMAN 1 3.4154 2.3035 KYMERCMSPPISMAE-p Q9UJ83;S192-p KYMERCMSPPISMAE 0.253035072535508 0.307326161045828 0.173666666666667 -0.100333333333333 11.3806830057467 6.77102288581597 0.173666666666667 -0.100333333333333 0.0727665357145844 0.210328299904226 2.22294130701044 -1.42048973483701 Q9UJ83 HACL1 Q9UJ83.S192.p_HACL1 Q9UJ83_S192s _1_1_192_192 Q9UJ83 Q9UJ83|Q9UJ83-2|Q9UJ83-4|Q9UJ83-3 2-hydroxyacyl-CoA lyase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30345.30554.3 23.56 23.56 2.063 6 1 1 0 883.4096 2568.2492 S192s TMT10 190 (R) CMsPPISMAETSAVCTAASVIR (N) CMS(0.99)PPIS(0.0)MAET(0.0)S(0.0)AVCT(0.0)AAS(0.0)VIR C:Carbamidomethylation,s:Phosphorylated S HACL1 64469.2 6 1 5046.1 23.56 HUMAN 1 11.3807 -6.771 KYNKEALSPPRRKAF-p O95243;S428-p KYNKEALSPPRRKAF 0.471273926485432 0.0095498813748576 0.108333333333333 -0.694333333333333 6.02926975324887 28.4953177669815 0.108333333333333 -0.694333333333333 0.249501421715802 0.00141406125647107 1.28977609041322 -5.97821091621173 O95243 MBD4 O95243.S428.p_MBD4 O95243_S428s _1_1_428_428 O95243 O95243|O95243-2 Methyl-CpG-binding domain protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9404.9818.2 9.17 2.53 99 1 1 1 0 539.7786 998.5832 S428s TMT10 425 (K) EALsPPR (R) EALS(1.0)PPR s:Phosphorylated S MBD4 66848.5 2 3 4271.1 34.42 HUMAN 1 6.0293 -28.4953 KYNYIGLSQGNLRVH-p R4GMX8;S69-p KYNYIGLSQGNLRVH 0.403668834276103 0.40002296131671 -0.114333333333333 -0.148333333333333 7.27334054676712 5.29281182178855 -0.114333333333333 -0.148333333333333 0.187355283684906 0.295609793337251 -1.50878029048554 -1.15721123162192 R4GMX8 RANBP10 R4GMX8.S69.p_RANBP10 R4GMX8_S69s _1_1_69_69 R4GMX8 R4GMX8|Q6VN20|A0A0D9SEU5|Q6VN20-3|R4GN91|R4GNA3|R4GMX7 Ran-binding protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19823.19823.3 7.69 7.69 2.254 3 1 1 0 569.6213 1626.8801 S69s TMT10 63 (K) YNYIGLsQGNLR (V) Y(0.0)NY(0.0)IGLS(0.99)QGNLR s:Phosphorylated S RANBP10 71282.8 1 8 1268.1 160.1 HUMAN 1 -7.2733 -5.2928 KYPESNRTPVKPSSV-p Q9UHB7;T674-p KYPESNRTPVKPSSV 0.666837662699998 0.0803122175656535 -0.083 0.217666666666667 3.28883090099028 14.532783177333 -0.083 0.217666666666667 0.468939601349449 0.0352145126418796 -0.778490656925009 2.78952374423725 Q9UHB7 AFF4 Q9UHB7.T674.p_AFF4 Q9UHB7_T674t _1_1_674_674 Q9UHB7 Q9UHB7|Q9UHB7-2 AF4/FMR2 family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16979.16979.4 13.94 6.3 1.124 6 1 1 0 785.387 3058.5522 T674t TMT10 668 (K) YPESNRtPVKPSSVEEEDSFFR (Q) Y(0.0)PES(0.0)NRT(0.99)PVKPS(0.0)S(0.0)VEEEDS(0.0)FFR K:TMT10,t:Phosphorylated T AFF4 127856.3 4 13 137.1 525.98 HUMAN 1 -3.2888 14.5328 KYPYSCRSQENILQG-p Q86V48;S611-p KYPYSCRSQENILQG 0.490692853704506 0.707967616895706 -0.101333333333333 -0.0363333333333333 5.69454527007189 2.062340710018 -0.101333333333333 -0.0363333333333333 0.269491749008761 0.621964975349301 -1.22995226086284 -0.522502632894615 Q86V48 LUZP1 Q86V48.S611.p_LUZP1 Q86V48_S611s _1_1_611_611 Q86V48 Q86V48|Q86V48-3|Q86V48-2 Leucine zipper protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16619.16619.3 11.34 11.34 7.704 4 1 1 0 628.9754 1804.9391 S611s Hydrogen 611 (R) sQENILQGFSTSHK (E) S(0.99)QENILQGFS(0.0)T(0.0)S(0.0)HK K:TMT10-Lys-Only,s:Phosphorylated S LUZP1 120843.3 2 8 507.1 289.34 HUMAN 1 -5.6945 -2.0623 KYQPKVKSPQRPSDW-p Q5UIP0;S782-p KYQPKVKSPQRPSDW 0.131504655206906 0.00106567586669276 -0.296333333333333 -1.56566666666667 18.2031074969053 50.3296428045328 -0.296333333333333 -1.56566666666667 0.0151247864094494 9.26906055760898e-06 -3.50348754246864 -15.9176021153258 Q5UIP0 RIF1 Q5UIP0.S782.p_RIF1 Q5UIP0_S782s _1_1_782_782 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8821.8821.3 14.01 14.01 2.957 3 1 1 0 575.9633 1645.9062 S782s TMT10 782 (K) sPQRPSDWSK (K) S(0.99)PQRPS(0.0)DWS(0.0)K K:TMT10,s:Phosphorylated S RIF1 276628.8 8 4 29.1 922.06 HUMAN 1 -18.2031 -50.3296 KYRVRRNSLQHHQDD-p Q6ZU80;S1008-p KYRVRRNSLQHHQDD 0.366013062586188 0.481872898791056 0.435666666666667 0.206333333333333 8.10143224814705 4.23229731563103 0.435666666666667 0.206333333333333 0.154830592304061 0.377372516935789 1.65275194439122 0.961111271181635 Q6ZU80 CEP128 Q6ZU80.S1008.p_CEP128 Q6ZU80_S1008s _1_1_1008_1008 Q6ZU80 Q6ZU80 Centrosomal protein of 128 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3481.3481.4 11.46 11.46 3.605 2 1 1 0 447.7152 1707.8724 S1008s Hydrogen 1006 (R) RNsLQHHQDDTK (Y) RNS(0.99)LQHHQDDT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S CEP128 128640.5 1 12 1261.1 161 HUMAN 1 8.1014 4.2323 KYSGLTASSKKKKPN-p Q96AT1;S115-p KYSGLTASSKKKKPN 0.163282134509363 0.00518848844139624 -0.232666666666667 -0.578333333333333 15.767866392281 33.2346961447901 -0.232666666666667 -0.578333333333333 0.0264980161695454 0.000474821510784066 -3.02374401191788 -7.46639229440754 Q96AT1 KIAA1143 Q96AT1.S115.p_KIAA1143 Q96AT1_S115s _1_1_115_115 Q96AT1 Q96AT1 Uncharacterized protein KIAA1143 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11978.12236.2 12.19 12.19 1.152 5 1 1 0 726.3812 1371.7884 S115s TMT10 109 (K) YSGLTAsSK (K) Y(0.0)S(0.0)GLT(0.0)AS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S KIAA1143 17465.1 2 2 1951.1 105.34 HUMAN 1 -15.7679 -33.2347 KYSPFVVSFRKHYPW-p Q96DU7;S404-p KYSPFVVSFRKHYPW 0.879692047273061 0.208852488679825 0.0306666666666667 -0.140333333333333 1.09529712467611 8.94646319846348 0.0306666666666667 -0.140333333333333 0.777088152112176 0.127454061715219 0.297614798211763 -1.7984525211698 Q96DU7 ITPKC Q96DU7.S404.p_ITPKC Q96DU7_S404s _1_1_404_404 Q96DU7 Q96DU7 Inositol-trisphosphate 3-kinase C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23064.23064.3 7.98 7.98 4.248 3 1 1 0 589.9919 1687.9936 S404s TMT10 398 (K) YSPFVVsFRK (H) Y(0.0)S(0.0)PFVVS(0.99)FRK K:TMT10,s:Phosphorylated S ITPKC 75947.8 1 5 2777.1 71.06 HUMAN 1 1.0953 -8.9465 KYSPPAISPLVSEKQ-p Q14694;S370-p KYSPPAISPLVSEKQ 0.105183872043084 0.00153965981191405 -0.306666666666667 -0.903 20.5845120847669 45.2712726848369 -0.306666666666667 -0.903 0.00874075186479889 2.9707953229539e-05 -4.00553106884266 -12.776834885726 Q14694 USP10 Q14694.S370.p_USP10 Q14694_S370s _1_1_370_370 Q14694 Q14694-2|Q14694-3 Ubiquitin carboxyl-terminal hydrolase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23441.23441.2 17.42 17.42 3.734 4 1 1 0 963.5222 1846.0726 S370s TMT10 364 (K) YSPPAIsPLVSEK (Q) Y(0.0)S(0.0)PPAIS(0.99)PLVS(0.0)EK K:TMT10,s:Phosphorylated S USP10 87759.8 4 10 358.1 346.34 HUMAN 1 -20.5845 -45.2713 KYSSLQKTPVWKGRN-p Q5TKA1-2;T55-p KYSSLQKTPVWKGRN 0.914786940697348 0.000952253650599092 -0.0253333333333333 -1.35633333333333 0.758053942519855 54.4141751479051 -0.0253333333333333 -1.35633333333333 0.839836229718941 3.61894918622865e-06 -0.212036873460668 -18.9837586427769 Q5TKA1 LIN9 Q5TKA1.2.T55.p_LIN9 Q5TKA1-2_T55t _1_1_55_55 Q5TKA1-2 Q5TKA1-2|Q5TKA1-3 Isoform 2 of Protein lin-9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18460.18460.3 9.38 2.97 1.438 4 1 1 0 702.0674 2024.2148 T55t TMT10 49 (K) YSSLQKtPVWK (G) Y(0.0)S(0.0)S(0.0)LQKT(0.99)PVWK K:TMT10,t:Phosphorylated T LIN9 64323.3 1 1 1238.1 163 HUMAN 1 -0.7581 -54.4142 KYSSRHKSHDNVYSL-p Q86SQ0;S157-p KYSSRHKSHDNVYSL 0.251728832793614 0.911656028053653 0.198 -0.0116666666666666 11.4240751168554 0.561848867263539 0.198 -0.0116666666666666 0.072043115951756 0.878648381276564 2.2305777607132 -0.160032670486363 Q86SQ0 PHLDB2 Q86SQ0.S157.p_PHLDB2 Q86SQ0_S157s _1_1_157_157 Q86SQ0 Q86SQ0|Q86SQ0-3|Q86SQ0-2|G5E9V3|E9PDY7 Pleckstrin homology-like domain family B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10632.10632.4 12.53 11.54 6.491 3 1 1 0 577.5469 2227.1984 S157s TMT10 155 (R) HKsHDNVYSLGGLEGR (K) HKS(0.99)HDNVY(0.0)S(0.0)LGGLEGR K:TMT10,s:Phosphorylated S PHLDB2 142897.4 1 3 1231.1 163.76 HUMAN 1 11.4241 -0.5618 KYSVGSLSPVSASVL-p Q9UBU7;S359-p KYSVGSLSPVSASVL 0.0948633510902073 0.00226437279650065 0.735666666666667 -1.125 21.7155935047211 40.9223457865625 0.735666666666667 -1.125 0.00673659827156255 8.08658994295126e-05 4.25719405348989 -10.5541027798738 Q9UBU7 DBF4 Q9UBU7.S359.p_DBF4 Q9UBU7_S359s _1_1_359_359 Q9UBU7 Q9UBU7 Protein DBF4 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22885.22885.4 14.52 14.52 1.859 6 1 1 0 715.6849 2779.7467 S359s TMT10 351 (R) IKYSVGSLsPVSASVLKK (T) IKY(0.0)S(0.0)VGS(0.0)LS(0.99)PVS(0.0)AS(0.0)VLKK K:TMT10,s:Phosphorylated S DBF4 77598.3 8 2 880.1 207.32 HUMAN 1 21.7156 -40.9223 KYVDEENSDGETSNH-p Q8N9T8;S136-p KYVDEENSDGETSNH 0.10987120770175 0.51806368618935 0.305333333333333 0.0766666666666667 20.0689670552558 3.83662473779676 0.305333333333333 0.0766666666666667 0.0098424517504542 0.413368640197611 3.89376709543662 0.885623025774604 Q8N9T8 KRI1 Q8N9T8.S136.p_KRI1 Q8N9T8_S136s _1_1_136_136 Q8N9T8 Q8N9T8 Protein KRI1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5125.5125.3 24.23 24.23 7.648 4 1 1 0 687.6183 1980.8733 S136s TMT10 130 (K) YVDEENsDGETSNHR (L) Y(0.0)VDEENS(0.99)DGET(0.0)S(0.0)NHR s:Phosphorylated S KRI1 83053 16 1 863.1 210.23 HUMAN 1 20.069 3.8366 KYVPPHLSPDKKWLG-p Q86W56;S448-p KYVPPHLSPDKKWLG 0.682078728827876 0.041482506309154 -0.058 -0.255 3.11407442212436 18.5267357802376 -0.058 -0.255 0.488194135160484 0.0140386847585086 -0.743488373385859 -3.56663381005337 Q86W56 BPHL Q86W56.S448.p_BPHL Q86W56_S448s _1_1_448_448 Q86W56 Q86W56|Q86W56-2|Q86W56-3|Q86W56-4 Poly(ADP-ribose) glycohydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13555.13555.3 13.2 13.2 5.085 2 1 1 0 683.3897 1968.1885 S448s TMT10 442 (K) YVPPHLsPDKK (W) Y(0.0)VPPHLS(0.99)PDKK K:TMT10,s:Phosphorylated S PARG 112534.8 3 10 855.1 211.13 HUMAN 1 -3.1141 -18.5267 KYVVLCESPQDKRTL-p Q8TC07-2;S186-p KYVVLCESPQDKRTL 0.519956341576425 0.151019146951034 0.101 -0.146 5.24597910669835 10.7945503066088 0.101 -0.146 0.298814790009654 0.0832808155249135 1.14895002490971 -2.11921900956281 Q8TC07 TBC1D15 Q8TC07.2.S186.p_TBC1D15 Q8TC07-2_S186s _1_1_186_186 Q8TC07-2 Q8TC07-2 Isoform 2 of TBC1 domain family member 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14880.14880.3 9.18 9.18 9.183 2 1 1 0 678.0161 1952.0676 S186s TMT10 180 (K) YVVLCEsPQDKR (T) Y(0.0)VVLCES(0.99)PQDKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TBC1D15 78306.6 1 4 1180.1 169.17 HUMAN 1 5.246 -10.7946 LAAAGDGSPDIGPTG-p Q5JSP0;S56-p LAAAGDGSPDIGPTG 0.461998274641388 0.00234487199305355 0.106666666666667 0.719 6.18441181080526 40.4400557124251 0.106666666666667 0.719 0.24074585524859 9.03637881546295e-05 1.31734925852119 10.3310780604786 Q5JSP0 FGD3 Q5JSP0.S56.p_FGD3 Q5JSP0_S56s _1_1_56_56 Q5JSP0 Q5JSP0|Q5JSP0-3|Q5JSP0-2 FYVE, RhoGEF and PH domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22230.22230.3 23.8 23.8 6.554 5 1 1 0 1125.5416 3294.6676 S56s TMT10 41 (R) AHCGDPVSLAAAGDGsPDIGPTGELSGSLK (I) AHCGDPVS(0.0)LAAAGDGS(0.99)PDIGPT(0.0)GELS(0.0)GS(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FGD3 80255.2 1 2 1834.1 112.05 HUMAN 1 6.1844 40.4401 LAADPGGSPAQRRRT-p Q5SQI0;S315-p LAADPGGSPAQRRRT 0.166690836791941 0.881726598410713 0.239666666666667 -0.018 15.5551726421352 0.767817253707257 0.239666666666667 -0.018 0.0278280474870701 0.83795032671531 2.98323728965342 -0.214558435669244 Q5SQI0 ATAT1 Q5SQI0.S315.p_ATAT1 Q5SQI0_S315s _1_1_315_315 Q5SQI0 Q5SQI0|Q5SQI0-2|Q5SQI0-3|Q5SQI0-4|Q5SQI0-5|Q5SQI0-6|Q5SQI0-7 Alpha-tubulin N-acetyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21331.21331.3 13.58 13.58 99 1 1 1 0 558.9648 1594.9114 S315s TMT10 306 (R) LLLAADPGGsPAQR (R) LLLAADPGGS(1.0)PAQR s:Phosphorylated S ATAT1 47037.5 1 4 3389.1 52.22 HUMAN 1 15.5552 -0.7678 LAAGSAETLPANFRV-p Q13136;T1159-p LAAGSAETLPANFRV 0.0608497647854506 0.587748922481853 -0.423666666666667 0.069 26.6322741167649 3.11902261896697 -0.423666666666667 0.069 0.00217156377487308 0.487638220883198 -5.46941908745713 0.744378290569361 Q13136 PPFIA1 Q13136.T1159.p_PPFIA1 Q13136_T1159t _1_1_1159_1159 Q13136 Q13136|Q13136-2 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18942.18942.3 18.77 18.77 4.188 2 1 1 0 595.3033 1703.9278 T1159t TMT10 1151 (R) GLAAGSAEtLPANFR (V) GLAAGS(0.0)AET(0.99)LPANFR t:Phosphorylated T PPFIA1 136347 3 34 248.1 410.18 HUMAN 1 -26.6323 3.119 LAAKSPPSLHLLEAF-p O75665;S672-p LAAKSPPSLHLLEAF 0.208993010347482 0.183797808085581 0.216666666666667 -0.136 13.1222102728158 9.67361102431842 0.216666666666667 -0.136 0.0487280433346117 0.10780499842516 2.53311206010718 -1.92430735820457 O75665 OFD1 O75665.S672.p_OFD1 O75665_S672s _1_1_672_672 O75665 O75665|O75665-3|A6NF31 Oral-facial-digital syndrome 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27850.27850.3 9.32 9.32 1.115 2 1 1 0 626.3505 1797.0675 S672s TMT10 669 (K) SPPsLHLLEAFK (N) S(0.0)PPS(0.99)LHLLEAFK K:TMT10,s:Phosphorylated S OFD1 117125.5 1 4 1369.1 149.33 HUMAN 1 13.1222 -9.6736 LAALGGNSSPSAKDI-p P05387;S16-p LAALGGNSSPSAKDI 0.779968305658193 0.198231587058096 -0.052 0.145333333333333 2.07429547521932 9.24808452803552 -0.052 0.145333333333333 0.620255255053001 0.118902653638035 -0.52519315705037 1.85063044332352 P05387 RPLP2 P05387.S16.p_RPLP2 P05387_S16s _1_1_16_16 P05387 P05387 60S acidic ribosomal protein P2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35957.35957.3 25.32 21.25 1.215 6 1 1 0 803.0934 2327.3011 S16s TMT10 3 (R) YVASYLLAALGGNsSPSAK (D) Y(0.0)VAS(0.0)Y(0.0)LLAALGGNS(0.99)S(0.0)PS(0.0)AK K:TMT10,s:Phosphorylated S RPLP2 11664.7 25 6 1134.1 173.84 HUMAN 1 -2.0743 9.2481 LAAMRSDSLVPGTHT-p Q9C0D0;S97-p LAAMRSDSLVPGTHT 0.455145758341492 0.21222245746777 0.102 -0.128666666666667 6.30438439758615 8.85653169346556 0.102 -0.128666666666667 0.234186340538127 0.130120831739675 1.33861121075223 -1.78289791623329 Q9C0D0 PHACTR1 Q9C0D0.S97.p_PHACTR1 Q9C0D0_S97s _1_1_97_97 Q9C0D0 Q9C0D0|Q9C0D0-2 Phosphatase and actin regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13987.13987.3 9.35 9.35 1.233 4 1 1 0 595.9739 1705.9435 S97s TMT10 95 (R) SDsLVPGTHTPPIR (R) S(0.0)DS(0.99)LVPGT(0.0)HT(0.0)PPIR s:Phosphorylated S PHACTR1 66763.3 1 5 638.1 255.38 HUMAN 1 6.3044 -8.8565 LAANENVSPGIPSAE-p Q8WW38;S1091-p LAANENVSPGIPSAE 0.219002866960347 0.0388623416823978 -0.334333333333333 0.259333333333333 12.7041930671833 18.9374459357881 -0.334333333333333 0.259333333333333 0.0536513548085793 0.0127718969689082 -2.45789821611485 3.65134673382956 Q8WW38 ZFPM2 Q8WW38.S1091.p_ZFPM2 Q8WW38_S1091s _1_1_1091_1091 Q8WW38 Q8WW38|Q8WW38-2|E7ET52 Zinc finger protein ZFPM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.32431.32431.4 20.65 20.65 4.959 7 1 1 0 965.9888 3780.9696 S1091s TMT10 1075 (K) SPSWISENPLAANENVsPGIPSAEEQLSSIAK (G) S(0.0)PS(0.0)WIS(0.0)ENPLAANENVS(0.99)PGIPS(0.0)AEEQLS(0.0)S(0.0)IAK K:TMT10,s:Phosphorylated S ZFPM2 130381.7 3 10 1154.1 171.84 HUMAN 1 -12.7042 18.9374 LAANFLLSQNFDDE_-p P54725-3;S356-p LAANFLLSQNFDDE_ 0.306383440584975 0.140259521562885 0.159 0.159666666666667 9.62781418033646 11.2398864857128 0.159 0.159666666666667 0.108947829368889 0.0751642539916465 1.91711521335194 2.19717429060119 P54725 RAD23A P54725.3.S356.p_RAD23A P54725-3_S356s _1_1_356_356 P54725-3 P54725|P54725-3|P54725-2 Isoform 3 of UV excision repair protein RAD23 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31897.32107.3 16.92 16.92 99 1 1 1 0 755.0083 2183.0454 S356s TMT10 346 (K) NENLAANFLLsQNFDDE (-) NENLAANFLLS(1.0)QNFDDE s:Phosphorylated S RAD23A 39594.5 3 7 1987.1 103.93 HUMAN 1 9.6278 11.2399 LAAPLLGSSSKFSEQ-p Q9Y2K6;S103-p LAAPLLGSSSKFSEQ 0.171396449036957 0.879484579263617 -0.247 -0.0173333333333333 15.2532966885103 0.78325067923289 -0.247 -0.0173333333333333 0.02983117302987 0.834977806264967 -2.92609356525649 -0.218568124427491 Q9Y2K6 USP20 Q9Y2K6.S103.p_USP20 Q9Y2K6_S103s _1_1_103_103 Q9Y2K6 Q9Y2K6 Ubiquitin carboxyl-terminal hydrolase 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23163.23163.2 9.12 9.12 1.18 3 1 1 0 791.452 1501.9354 S103s TMT10 96 (R) LAAPLLGsSSK (F) LAAPLLGS(0.99)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S USP20 103827 1 1 1704.1 120.18 HUMAN 1 -15.2533 -0.7833 LAAPPPDSPPAEDVY-p P56945-6;S401-p LAAPPPDSPPAEDVY 0.965110779182277 0.52906403601265 -0.00700000000000001 0.0656666666666667 0.297397241701953 3.71722209375229 -0.00700000000000001 0.0656666666666667 0.933813774493184 0.424891253021793 -0.0869821959562849 0.862536436997228 P56945 BCAR1 P56945.6.S401.p_BCAR1 P56945-6_S401s _1_1_401_401 P56945-6 P56945-6|P56945-2|P56945-3|P56945-7|P56945-8|P56945-5|P56945-4 Isoform 6 of Breast cancer anti-estrogen resistance protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.36362.36362.4 28.39 22.73 1.296 4 1 1 0 1015.0186 3977.0786 S401s TMT10 390 (R) TPLVLAAPPPDsPPAEDVYDVPPPAPDLYDVPPGLR (R) T(0.0)PLVLAAPPPDS(0.99)PPAEDVY(0.0)DVPPPAPDLY(0.0)DVPPGLR s:Phosphorylated S BCAR1 98217.4 12 4 1150.1 172.39 HUMAN 1 -0.2974 3.7172 LAAPSGASAQAAEQL-p P51617;S571-p LAAPSGASAQAAEQL 0.29506303049425 0.258449517528879 0.282333333333333 0.198 9.99770798925327 7.74160156159508 0.282333333333333 0.198 0.1000527894265 0.168205365039936 1.98131225390686 1.58981395726049 P51617 IRAK1 P51617.S571.p_IRAK1 P51617_S571s _1_1_571_571 P51617 P51617|D3YTB5|P51617-3|P51617-2|P51617-4 Interleukin-1 receptor-associated kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26831.26831.5 8.29 2.41 1.488 6 1 1 0 992.4883 4878.4721 S571s TMT10 554 (R) AHSGAAPWQPLAAPSGAsAQAAEQLQRGPNQPVESDESLGGLSAALR (S) AHS(0.0)GAAPWQPLAAPS(0.0)GAS(0.99)AQAAEQLQRGPNQPVES(0.0)DES(0.0)LGGLS(0.0)AALR s:Phosphorylated S IRAK1 77505.2 1 3 4852.1 25.87 HUMAN 1 9.9977 7.7416 LAASFGKSINF____-p P09622;S506-p LAASFGKSINF____ 0.495458193368512 0.00780935263815071 0.136333333333333 0.625 5.61645036979947 30.0696479236868 0.136333333333333 0.625 0.274381586574012 0.000984090881365032 1.21592278313703 6.44309816969511 P09622 DLD P09622.S506.p_DLD P09622_S506s _1_1_506_506 P09622 P09622|E9PEX6|P09622-3 Dihydrolipoyl dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28329.28329.3 8.21 8.21 1.525 2 1 1 0 669.6828 1927.0689 S506s TMT10 496 (R) EANLAASFGKsINF (-) EANLAAS(0.0)FGKS(0.99)INF K:TMT10,s:Phosphorylated S DLD 54746.8 1 1 7007.1 8.21 HUMAN 1 5.6165 30.0696 LAASGSNSPTRSESP-p E9PIM0;S16-p LAASGSNSPTRSESP 0.93931869762336 0.0404768025470952 -0.0126666666666667 -0.375333333333333 0.530404257050557 18.6730223613927 -0.0126666666666667 -0.375333333333333 0.88503322389504 0.0135736849192431 -0.151548090913414 -3.59669174489871 E9PIM0 CREBZF E9PIM0.S16.p_CREBZF E9PIM0_S16s _1_1_16_16 E9PIM0 E9PIM0|Q9NS37 CREB/ATF bZIP transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12505.12505.2 13.65 9.11 1.926 4 1 1 0 741.8797 1402.7852 S16s TMT10 8 (K) LLAASGSNsPTR (S) LLAAS(0.0)GS(0.0)NS(0.99)PT(0.0)R s:Phosphorylated S CREBZF 37998.2 2 1 1443.1 141.64 HUMAN 1 -0.5304 -18.673 LAASRAASVDDDEEE-p O43147-2;S444-p LAASRAASVDDDEEE 0.648181670470262 0.219225065426382 -0.0656666666666667 0.128333333333333 3.52742500460877 8.67622147626245 -0.0656666666666667 0.128333333333333 0.443871743963428 0.135636899067545 -0.825645194431363 1.75171058882497 O43147 SGSM2 O43147.2.S444.p_SGSM2 O43147-2_S444s _1_1_444_444 O43147-2 O43147-2 Isoform 2 of Small G protein signaling modulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30156.30156.4 18.46 18.46 18.459 3 1 1 0 823.1283 3209.5165 S444s TMT10 442 (R) AAsVDDDEEEEDKLHAMLSMICSR (N) AAS(0.99)VDDDEEEEDKLHAMLS(0.0)MICS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SGSM2 119788.6 1 1 5084.1 23.16 HUMAN 1 -3.5274 8.6762 LAAVGRRSPGNLEGP-p H0Y2S1;S43-p LAAVGRRSPGNLEGP 0.276537853558772 0.00821934864720606 0.164 0.482333333333333 10.5565783797666 29.6714958641618 0.164 0.482333333333333 0.0879715333911788 0.00107857515872135 2.07859522541654 6.32291676372325 H0Y2S1 GTPBP6 H0Y2S1.S43.p_GTPBP6 H0Y2S1_S43s _1_1_43_43 H0Y2S1 O43824|H0Y2S1 Putative GTP-binding protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16681.16681.2 12.61 6.01 99 1 1 1 0 796.8738 1512.7757 S43s TMT10 43 (R) sPGNLEGPWGGGR (G) S(1.0)PGNLEGPWGGGR s:Phosphorylated S GTPBP6 57238.8 3 1 6281.1 12.61 HUMAN 1 10.5566 29.6715 LADAMAESPSRDVVG-p Q9H6U6;S869-p LADAMAESPSRDVVG 0.0226893244468939 0.174335452965156 -0.737 -0.146333333333333 38.0225187880517 9.97712108257477 -0.737 -0.146333333333333 0.000157669656401102 0.100528196607649 -9.29662437840646 -1.97693847511355 Q9H6U6 BCAS3 Q9H6U6.S869.p_BCAS3 Q9H6U6_S869s _1_1_869_869 Q9H6U6 Q9H6U6|Q9H6U6-2|K7ESE9|Q9H6U6-6 Breast carcinoma-amplified sequence 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17346.17346.3 18.98 16.62 2 4 1 1 0 866.7523 2518.2769 S869s TMT10 862 (R) LADAMAEsPSRDVVGSGTELQR (E) LADAMAES(0.99)PS(0.0)RDVVGS(0.0)GT(0.0)ELQR s:Phosphorylated S BCAS3 102547.1 2 9 847.1 212.9 HUMAN 1 -38.0225 -9.9771 LADGGSASPIKDQPV-p Q9HB96;S249-p LADGGSASPIKDQPV 0.515757067329565 0.0870683547880949 -0.151333333333333 -0.188 5.31022271475869 14.0352855558084 -0.151333333333333 -0.188 0.294427064193338 0.0394885734104897 -1.1606163526632 -2.69777599713017 Q9HB96 FANCE Q9HB96.S249.p_FANCE Q9HB96_S247sS249s_2_2_247_249 Q9HB96 Q9HB96 Fanconi anemia group E protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26820.26820.4 8.95 8.95 5.748 4 2 2 0 787.6584 2987.669 S247s S249s TMT10 238 (K) SLESLADGGsAsPIKDQPVMAVK (T) S(0.0)LES(0.0)LADGGS(0.99)AS(0.99)PIKDQPVMAVK K:TMT10,s:Phosphorylated S FANCE 59451.6 2 4 2163.1 94.82 HUMAN 1 -5.3102 -14.0353 LADIVVATPGRLVDH-p Q8N8A6;T346-p LADIVVATPGRLVDH 0.823567086658555 0.899801252921161 0.032 -0.0146666666666666 1.62480369440792 0.64192938098431 0.032 -0.0146666666666666 0.687891004990107 0.862595249181008 0.424010108345307 -0.18146268640994 Q8N8A6 DDX51 Q8N8A6.T346.p_DDX51 Q8N8A6_T346t _1_1_346_346 Q8N8A6 Q8N8A6 ATP-dependent RNA helicase DDX51 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31583.31583.4 13.87 12.35 2.392 3 1 1 0 882.9648 3448.8572 T346t TMT10 338 (R) CLADIVVAtPGRLVDHIDQTPGFSLQQLR (F) CLADIVVAT(0.99)PGRLVDHIDQT(0.0)PGFS(0.0)LQQLR C:Carbamidomethylation,t:Phosphorylated T DDX51 73026.6 1 4 1164.1 170.94 HUMAN 1 1.6248 -0.6419 LADLPKDYLLSESED-p Q9BVJ6;Y26-p LADLPKDYLLSESED 0.740662521890971 0.245977604493325 -0.051 -0.118666666666667 2.47391496737936 8.02714401591589 -0.051 -0.118666666666667 0.565729080052874 0.15750182790521 -0.611371854111784 -1.63934759245683 Q9BVJ6 UTP14A Q9BVJ6.Y26.p_UTP14A Q9BVJ6_Y26yS29s_2_2_26_29 Q9BVJ6 Q9BVJ6|Q9BVJ6-3 U3 small nucleolar RNA-associated protein 14 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.35992.36190.5 18.27 20.76 1.426 5 2 2 0 994.287 4807.4616 Y26y S29s TMT10 6 (R) LAESLLALSQQEELADLPKDyLLsESEDEGDNDGERK (H) LAES(0.0)LLALS(0.0)QQEELADLPKDY(0.99)LLS(0.99)ES(0.0)EDEGDNDGERK K:TMT10,y:Phosphorylated Y,s:Phosphorylated S UTP14A 88147.4 5 13 550.1 274.41 HUMAN 1 -2.4739 -8.0271 LADQAKLSFERKKQG-p Q03468;S282-p LADQAKLSFERKKQG 0.149214344489706 0.0229500669550057 -0.269 -0.338333333333333 16.6615444619015 22.3776587402873 -0.269 -0.338333333333333 0.0215697719665707 0.00578407780097027 -3.19626709629786 -4.40406807864763 Q03468 ERCC6 Q03468.S282.p_ERCC6 Q03468_S282s _1_1_282_282 Q03468 Q03468|P0DP91 DNA excision repair protein ERCC-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18287.18287.3 12.25 12.25 9.827 2 1 1 0 660.3513 1899.074 S282s TMT10 274 (K) YLADQAKLsFER (K) Y(0.0)LADQAKLS(0.99)FER K:TMT10,s:Phosphorylated S ERCC6 169554.2 1 3 403.1 327.23 HUMAN 1 -16.6615 -22.3777 LAEAALESPRPALVR-p O14745;S280-p LAEAALESPRPALVR 0.953559929465783 0.82757139452157 -0.011 -0.028 0.406047091837262 1.15093017581918 -0.011 -0.028 0.910741844289992 0.767197152788818 -0.117447353801743 -0.311289323516312 O14745 SLC9A3R1 O14745.S280.p_SLC9A3R1 O14745_S280s _1_1_280_280 O14745 O14745|O14745-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16331.16331.2 20.5 20.5 99 1 1 1 0 936.9828 1792.9916 S280s Hydrogen 271 (R) EALAEAALEsPRPALVR (S) EALAEAALES(1.0)PRPALVR s:Phosphorylated S SLC9A3R1 39153 15 11 534.1 279.04 HUMAN 1 -0.406 -1.1509 LAEAGMPSPEWTKRK-p Q8WWH5;S101-p LAEAGMPSPEWTKRK 0.17896138064623 0.569996845966263 -0.221666666666667 -0.054 14.7578425273639 3.29054326710511 -0.221666666666667 -0.054 0.0334361101490335 0.46875474106868 -2.83315652092513 -0.778716099160847 Q8WWH5 TRUB1 Q8WWH5.S101.p_TRUB1 Q8WWH5_S101s _1_1_101_101 Q8WWH5 Q8WWH5 Probable tRNA pseudouridine synthase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28431.28431.3 15.97 15.97 6.218 2 1 1 0 690.0257 1988.0927 S101s TMT10 93 (K) LLAEAGMPsPEWTK (R) LLAEAGMPS(0.99)PEWT(0.0)K K:TMT10,s:Phosphorylated S TRUB1 37537.4 1 3 2593.1 77.29 HUMAN 1 -14.7578 -3.2905 LAEDALNTV______-p Q08345-5;T918-p LAEDALNTV______ 0.976111830837964 0.429923336204529 0.00566666666666666 0.0923333333333334 0.205808081388943 4.88252749556693 0.00566666666666665 0.0923333333333334 0.953716270618316 0.324898158980317 0.0607798420445494 1.08227164167663 Q08345 DDR1 Q08345.5.T918.p_DDR1 Q08345-5_T918t _1_1_918_918 Q08345-5 Q08345-5|Q08345-6 Isoform 4 of Epithelial discoidin domain-containing receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28079.28079.2 9.97 9.15 99 1 1 1 0 701.349 1321.7201 T918t TMT10 910 (R) FLAEDALNtV (-) FLAEDALNT(1.0)V t:Phosphorylated T DDR1 102764.5 1 1 6720.1 9.97 HUMAN 1 0.2058 4.8825 LAEDEGDSEPEAVGQ-p Q9UIG0;S1468-p LAEDEGDSEPEAVGQ 0.863601860466773 0.335743382074166 -0.0256666666666667 -0.0986666666666666 1.24126744884273 6.28102557887168 -0.0256666666666667 -0.0986666666666666 0.75140357173569 0.235449320876099 -0.333348961187508 -1.33414400407517 Q9UIG0 BAZ1B Q9UIG0.S1468.p_BAZ1B Q9UIG0_S1468s _1_1_1468_1468 Q9UIG0 Q9UIG0|Q9UIG0-2 Tyrosine-protein kinase BAZ1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5394.5394.2 22.16 22.16 10.805 2 1 1 0 934.8817 1788.7882 S1468s Hydrogen 1461 (R) LAEDEGDsEPEAVGQSR (G) LAEDEGDS(0.99)EPEAVGQS(0.0)R s:Phosphorylated S BAZ1B 172497.3 18 12 370.1 339.44 HUMAN 1 -1.2413 -6.281 LAEGREWSLESSPAQ-p Q8N6T3;S125-p LAEGREWSLESSPAQ 0.796313559448739 0.815275302401439 0.0366666666666667 -0.031 1.90990913830685 1.24067102263309 0.0366666666666667 -0.031 0.644182742758122 0.751506770734863 0.488757030758777 -0.333170449520141 Q8N6T3 ARFGAP1 Q8N6T3.S125.p_ARFGAP1 Q8N6T3_S125s _1_1_125_125 Q8N6T3 Q8N6T3-2|Q8N6T3-3|Q8N6T3-5|F8VWH9 ADP-ribosylation factor GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25667.25667.4 16.49 16.49 1.111 4 1 1 0 804.4038 3134.6221 S125s TMT10 115 (K) VVALAEGREWsLESSPAQNWTPPQPR (T) VVALAEGREWS(0.99)LES(0.0)S(0.0)PAQNWT(0.0)PPQPR s:Phosphorylated S ARFGAP1 45009.4 3 1 243.1 413.25 HUMAN 1 1.9099 -1.2407 LAEIEHSSTESSFDS-p P15822;S1293-p LAEIEHSSTESSFDS 0.4319622910657 0.849717799306791 0.183333333333333 0.041 6.71298416123541 0.993363734441254 0.183333333333333 0.041 0.213157974059606 0.795542941071409 1.41067302827198 0.27218617582671 P15822 HIVEP1 P15822.S1293.p_HIVEP1 P15822_S1293s _1_1_1293_1293 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18311.18311.3 20.16 20.16 1.177 8 1 1 0 802.3757 2325.1408 S1293s TMT10 1286 (R) LAEIEHSsTESSFDSTLSR (S) LAEIEHS(0.0)S(0.99)T(0.0)ES(0.0)S(0.0)FDS(0.0)T(0.0)LS(0.0)R s:Phosphorylated S HIVEP1 299483.8 1 20 82.1 631.69 HUMAN 1 6.713 0.9934 LAEKLGGSAVISLEG-p P23528;S156-p LAEKLGGSAVISLEG 0.355059658555044 0.146155867006518 0.126 0.17 8.35599788863414 11.0014256771165 0.126 0.17 0.146015920668255 0.0794067519984222 1.69686738567398 2.15538723929512 P23528 CFL1 P23528.S156.p_CFL1 P23528_S156s _1_1_156_156 P23528 E9PK25|P23528|G3V1A4 Cofilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29605.29605.2 13.7 13.7 3.039 2 1 1 0 940.0394 1799.1043 S156s TMT10 153 (K) LGGsAVISLEGKPL (-) LGGS(0.99)AVIS(0.0)LEGKPL K:TMT10,s:Phosphorylated S CFL1 18730.4 6 10 681.1 245.42 HUMAN 1 8.356 11.0014 LAELEQNSPKIQKVK-p H3BQK9;S4553-p LAELEQNSPKIQKVK 0.553842218497382 0.687758422327998 0.0846666666666667 -0.0393333333333333 4.73728379437856 2.22572053282785 0.0846666666666667 -0.0393333333333333 0.335947660114431 0.599001550729549 1.05568638033738 -0.55816129180959 H3BQK9 NotFound H3BQK9.S4553.p_NotFound H3BQK9_S4553s _1_1_4553_4553 H3BQK9 H3BQK9|H3BPE1|Q9UPN3|Q9UPN3-5|Q9UPN3-2|Q9UPN3-3|Q9UPN3-4 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24226.24226.3 16.49 12.27 99 1 1 1 0 828.4681 2403.4215 S4553s TMT10 4544 (K) AFLAELEQNsPKIQK (V) AFLAELEQNS(1.0)PKIQK K:TMT10,s:Phosphorylated S MACF1 866539.7 6 7 472.1 301.95 HUMAN 1 4.7373 -2.2257 LAEMHRQSPKEKASK-p A0A1B0GUD6;S693-p LAEMHRQSPKEKASK 0.739466638213317 0.00968468024882672 0.0653333333333333 -0.502 2.48400964123619 28.3654210923931 0.0653333333333334 -0.502 0.564415635184208 0.00145699442754624 0.613508481990567 -5.94106103246795 A0A1B0GUD6 NotFound A0A1B0GUD6.S693.p_NotFound A0A1B0GUD6_S693s _1_1_693_693 A0A1B0GUD6 A0A1B0GUD6|A0A1B0GWG7|Q3KR37-4|J3KNL5|Q3KR37-2|A0A024R3M2|Q3KR37-3 GRAM domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10385.10385.5 8.33 8.33 1.519 5 1 1 0 561.2933 2722.4801 S693s TMT10 681 (K) TESTYLAEMHRQsPKEK (A) T(0.0)ES(0.0)T(0.0)Y(0.0)LAEMHRQS(0.99)PKEK K:TMT10,s:Phosphorylated S GRAMD1B 101868.5 1 4 3911.1 40.9 HUMAN 1 2.484 -28.3654 LAEQLGLSTGEKEKL-p O75821;S189-p LAEQLGLSTGEKEKL 0.0519525792237636 0.0190570547915817 -0.540333333333333 -0.399 28.0555410983852 23.6532058178421 -0.540333333333334 -0.399 0.00156475335053565 0.00431200661291897 -5.86165059452441 -4.70510032095033 O75821 EIF3G O75821.S189.p_EIF3G O75821_S189s _1_1_189_189 O75821 O75821 Eukaryotic translation initiation factor 3 subunit G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21950.21950.2 11.3 11.3 1.18 2 1 1 0 957.011 1833.037 S189s TMT10 181 (K) ELAEQLGLsTGEK (E) ELAEQLGLS(0.99)T(0.0)GEK K:TMT10,s:Phosphorylated S EIF3G 35895.6 1 4 2001.1 103.32 HUMAN 1 -28.0555 -23.6532 LAERHGGSPQPLATT-p Q9UQ35;S377-p LAERHGGSPQPLATT 0.949207015586855 0.669395493538383 0.0153333333333333 0.0646666666666667 0.448659992363449 2.38223221619375 0.0153333333333333 0.0646666666666667 0.901849358642421 0.577798990032028 0.129222022377742 0.591805790293981 Q9UQ35 SRRM2 Q9UQ35.S377.p_SRRM2 Q9UQ35_S377s _1_1_377_377 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16090.16090.4 18.63 16.21 5.285 7 1 1 0 791.1422 3081.5803 S377s TMT10 374 (R) HGGsPQPLATTPLSQEPVNPPSEASPTR (D) HGGS(0.99)PQPLAT(0.0)T(0.0)PLS(0.0)QEPVNPPS(0.0)EAS(0.0)PT(0.0)R s:Phosphorylated S SRRM2 300351.7 2 11 2.1 3310.34 HUMAN 1 0.4487 2.3822 LAERQHTSMDLPKLA-p A0A0A0MR66;S775-p LAERQHTSMDLPKLA 0.977130047691108 0.573318920895897 0.00600000000000001 0.087 0.197220505364352 3.25746321692052 0.00600000000000001 0.087 0.955603979090383 0.472338861334816 0.0582975016517255 0.772124142887952 A0A0A0MR66 RBM10 A0A0A0MR66.S775.p_RBM10 A0A0A0MR66_S775s _1_1_775_775 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2|P98175-3|P98175-4 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10750.10750.3 10.84 10.7 2.091 2 1 1 0 532.2738 1514.8401 S775s TMT10 772 (R) QHTsMDLPK (L) QHT(0.0)S(0.99)MDLPK K:TMT10,s:Phosphorylated S RBM10 110706.4 2 11 270.1 394.36 HUMAN 1 0.1972 3.2575 LAESPNASDTECSDE-p Q6IC98;S28-p LAESPNASDTECSDE 0.726488633986434 0.932203362469907 0.0486666666666667 -0.00899999999999997 2.63156072899001 0.429567471419026 0.0486666666666667 -0.00899999999999997 0.545561766709104 0.90582281036705 0.644530427346542 -0.123946727246477 Q6IC98 GRAMD4 Q6IC98.S28.p_GRAMD4 Q6IC98_S28s _1_1_28_28 Q6IC98 Q6IC98 GRAM domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25476.25476.4 25.09 17.08 2.307 4 1 1 0 932.7048 3647.8263 S28s TMT10 15 (K) RDDFLDLAESPNAsDTECSDEIPLKVPR (T) RDDFLDLAES(0.0)PNAS(0.99)DT(0.0)ECS(0.0)DEIPLKVPR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GRAMD4 66806.3 8 2 1562.1 131.36 HUMAN 1 2.6316 -0.4296 LAETESESEAELAGF-p Q8NC44;S283-p LAETESESEAELAGF 0.778883039367512 0.11732522892212 -0.0403333333333333 -0.164666666666667 2.08602748906241 12.2687525565747 -0.0403333333333333 -0.164666666666667 0.618581961108869 0.0593095657629113 -0.527770268153728 -2.3788781269153 Q8NC44 FAM134A Q8NC44.S283.p_FAM134A Q8NC44_T279tS281sS283s_3_3_279_283 Q8NC44 Q8NC44 Reticulophagy regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28193.28842.4 23.33 23.33 10.203 4 3 3 0 1049.9995 3957.0584 T279t S281s S283s TMT10 267 (K) NAPPGGDEPLAEtEsEsEAELAGFSPVVDVKK (T) NAPPGGDEPLAET(0.99)ES(0.99)ES(0.99)EAELAGFS(0.0)PVVDVKK K:TMT10,t:Phosphorylated T,s:Phosphorylated S RETREG2 58171.3 5 10 1304.1 156.18 HUMAN 1 -2.086 -12.2688 LAEVHSVSPEQGAKD-p Q5T1V6;S76-p LAEVHSVSPEQGAKD 0.795455450028357 0.00814255394474194 0.046 0.493 1.92059028301814 29.7665644471903 0.046 0.493 0.642600370624606 0.00105522131524102 0.491143479534563 6.35144904676267 Q5T1V6 DDX59 Q5T1V6.S76.p_DDX59 Q5T1V6_S76s _1_1_76_76 Q5T1V6 Q5T1V6|Q5T1V6-2 Probable ATP-dependent RNA helicase DDX59 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25974.25974.5 9.36 9.36 1.184 7 1 1 0 1019.7034 5014.5257 S76s TMT10 39 (R) DVPVDAVATEAATIDRHISESCPFPSPGGQLAEVHSVsPEQGAK (D) DVPVDAVAT(0.0)EAAT(0.0)IDRHIS(0.0)ES(0.0)CPFPS(0.0)PGGQLAEVHS(0.0)VS(0.99)PEQGAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DDX59 69493.1 2 1 2478.1 81.77 HUMAN 1 1.9206 29.7666 LAFDSEHSADEKEKP-p Q96L73;S486-p LAFDSEHSADEKEKP 0.178192032877632 0.0217418525104108 0.413666666666667 -0.366333333333333 14.7976118334341 22.7302902059617 0.413666666666667 -0.366333333333333 0.0331313259127391 0.00533299257964798 2.84057858940185 -4.48600792299621 Q96L73 NSD1 Q96L73.S486.p_NSD1 Q96L73_S486s _1_1_486_486 Q96L73 Q96L73|Q96L73-3|Q96L73-2|A0A1W2PS55 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11965.11965.5 13.34 13.34 2.537 3 1 1 0 629.9296 3065.6384 S486s TMT10 478 (K) SLAFDSEHsADEKEKPCAK (S) S(0.0)LAFDS(0.0)EHS(0.99)ADEKEKPCAK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NSD1 302295.2 4 3 601.1 263.26 HUMAN 1 14.7976 -22.7303 LAFRADDTFEALCIE-p Q15370;T84-p LAFRADDTFEALCIE 0.437997127886488 0.411863321160939 -0.109333333333333 0.122666666666667 6.60173599311745 5.1254712396005 -0.109333333333333 0.122666666666667 0.218688729090794 0.307222398959395 -1.39110281049511 1.12676981582755 Q15370 TCEB2 Q15370.T84.p_TCEB2 Q15370_T84t _1_1_84_84 Q15370 Q15370|B8ZZU8 Elongin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34914.34914.5 15.63 15.63 7.473 6 1 1 0 929.8299 4565.174 T84t TMT10 81 (R) ADDtFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ (-) ADDT(0.99)FEALCIEPFS(0.0)S(0.0)PPELPDVMKPQDS(0.0)GS(0.0)S(0.0)ANEQAVQ C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ELOB 13246.7 2 1 5074.1 23.28 HUMAN 1 -6.6017 5.1255 LAGARDLSADRPRLQ-p Q07352;S192-p LAGARDLSADRPRLQ 0.341244205876587 0.123074582738133 -0.14 -0.173333333333333 8.68016360184672 12.0006238394038 -0.14 -0.173333333333333 0.135513836235529 0.0630866717543629 -1.75299851010839 -2.33128195088708 Q07352 ZFP36L1 Q07352.S192.p_ZFP36L1 Q07352_S192s _1_1_192_192 Q07352 Q07352 mRNA decay activator protein ZFP36L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5590.5590.3 8.8 2.75 99 1 1 1 0 413.5412 1158.6429 S192s TMT10 190 (R) DLsADRPR (L) DLS(1.0)ADRPR s:Phosphorylated S ZFP36L1 36769.3 2 10 1672.2 122.01 HUMAN 1 -8.6802 -12.0006 LAGKAPPSPGSLAAP-p Q9Y4B5;S87-p LAGKAPPSPGSLAAP 0.979176920158685 0.188867209974282 0.00399999999999999 -0.138666666666667 0.180853916406292 9.51862821523172 0.00399999999999999 -0.138666666666667 0.959212011250656 0.11172160816407 0.0535541000174477 -1.89746075383722 Q9Y4B5 MTCL1 Q9Y4B5.S87.p_MTCL1 Q9Y4B5_S87s _1_1_87_87 Q9Y4B5 Q9Y4B5 Microtubule cross-linking factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13360.13360.3 9.72 9.72 2.3 2 1 1 0 496.2595 1406.7953 S87s TMT10 84 (K) APPsPGSLAAPGR (L) APPS(0.99)PGS(0.0)LAAPGR s:Phosphorylated S MTCL1 210777.5 2 2 1389.1 147.22 HUMAN 1 0.1809 -9.5186 LAGLGPGSTPRTASR-p Q8WUM0;S27-p LAGLGPGSTPRTASR 0.628647939920457 0.0132031691560471 0.071 -0.414666666666667 3.74573548887703 26.1601301719903 0.071 -0.414666666666667 0.422110787449956 0.00242095648181545 0.868203604552289 -5.33666399591465 Q8WUM0 NUP133 Q8WUM0.S27.p_NUP133 Q8WUM0_S27sT28t_2_2_27_28 Q8WUM0 Q8WUM0 Nuclear pore complex protein Nup133 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12136.12136.4 10.29 6.18 9.543 4 2 2 0 535.772 1980.13 S27s T28t TMT10 17 (R) RGPLAGLGPGstPRTASR (K) RGPLAGLGPGS(0.99)T(0.99)PRT(0.0)AS(0.0)R s:Phosphorylated S,t:Phosphorylated T NUP133 130003.6 2 17 652.1 254.15 HUMAN 1 3.7457 -26.1601 LAGTLPGSKRQLQTP-p P46013;S1207-p LAGTLPGSKRQLQTP 0.654101198681097 0.0154079660923365 0.0616666666666667 -0.572333333333333 3.45586638772528 25.0682080572335 0.0616666666666667 -0.572333333333333 0.451245995877742 0.0031130005275189 0.811575938238252 -5.05474114753743 P46013 MKI67 P46013.S1207.p_MKI67 P46013_S1207s _1_1_1207_1207 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23770.23770.3 13.49 8.98 4.258 2 1 1 0 537.3027 1529.9303 S1207s TMT10 1198 (K) LDLAGTLPGsK (R) LDLAGT(0.0)LPGS(0.99)K K:TMT10,s:Phosphorylated S MKI67 360912.4 2 32 5.1 1918.46 HUMAN 1 3.4559 -25.0682 LAGVRPGSPRATASA-p Q14938;S361-p LAGVRPGSPRATASA 0.957143776116471 0.14954674113188 0.00933333333333333 0.150666666666667 0.373695713801256 10.8594449185436 0.00933333333333333 0.150666666666667 0.917551455817181 0.0820456401989918 0.108443742441249 2.13055663104289 Q14938 NFIX Q14938.S361.p_NFIX Q14938_S361s _1_1_361_361 Q14938 Q14938|Q14938-4|K7EN08|Q14938-3|Q14938-5|Q14938-6 Nuclear factor 1 X-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17619.17619.5 18.37 18.37 10.452 2 1 1 0 490.6632 2369.3226 S361s TMT10 344 (R) MAFTHHPLPVLAGVRPGsPR (A) MAFT(0.0)HHPLPVLAGVRPGS(0.99)PR s:Phosphorylated S NFIX 55610.7 7 7 1219.1 165.13 HUMAN 1 0.3737 10.8594 LAHDEMKSPREPGYK-p Q9Y2W1;S698-p LAHDEMKSPREPGYK 0.191443664412651 0.392917232204852 -0.321666666666667 0.114 14.0134519363186 5.39222650553639 -0.321666666666667 0.114 0.0396875972080487 0.288919829199198 -2.69538862186787 1.17522110615239 Q9Y2W1 THRAP3 Q9Y2W1.S698.p_THRAP3 Q9Y2W1_S698s _1_1_698_698 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6550.6550.4 14.87 9.29 11.842 2 1 1 0 522.2891 2006.1638 S698s TMT10 698 (K) sPREPGYKAEGK (Y) S(0.99)PREPGY(0.0)KAEGK K:TMT10,s:Phosphorylated S THRAP3 108720.9 22 82 10.2 1293.04 HUMAN 1 -14.0135 5.3922 LAHGHYASPEIKQKL-p A0A0D9SGF6;S1413-p LAHGHYASPEIKQKL 0.152026163448554 0.00849347307275846 -0.471 0.499333333333333 16.4719280260127 29.3963341365857 -0.471 0.499333333333334 0.0225323867739523 0.00114912318280152 -3.15933804874197 6.24090775543241 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.S1413.p_SPTAN1 A0A0D9SGF6_S1413s _1_1_1413_1413 A0A0D9SGF6 A0A0D9SGF6|Q13813-2|A0A0D9SF54|Q13813-3 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33518.33518.5 18.61 18.61 5.688 3 1 1 0 683.5476 3333.7421 S1413s TMT10 1392 (R) AGTFQAFEQFGQQLLAHGHYAsPEIK (Q) AGT(0.0)FQAFEQFGQQLLAHGHY(0.0)AS(0.99)PEIK K:TMT10,s:Phosphorylated S SPTAN1 288398.5 2 15 263.1 396.39 HUMAN 1 -16.4719 29.3963 LAHRRAHTPNPLHSC-p A0A0C4DFM2;T477-p LAHRRAHTPNPLHSC 0.552777326044719 0.0359648549186556 0.0983333333333333 0.344666666666667 4.751492017326 19.4374870074152 0.0983333333333333 0.344666666666667 0.334850381651724 0.0113828575060515 1.05831447251421 3.75586642414801 A0A0C4DFM2 NotFound A0A0C4DFM2.T477.p_NotFound A0A0C4DFM2_T477t _1_1_477_477 A0A0C4DFM2 A0A0C4DFM2|Q6ZN55-2 HCG1643764, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5666.5666.4 16.02 16.02 3.722 2 1 1 0 568.2823 2190.1425 T477t TMT10 474 (R) RAHtPNPLHSCPCGK (T) RAHT(0.99)PNPLHS(0.0)CPCGK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ZNF574 111041.3 1 4 1417.1 144.46 HUMAN 1 4.7515 19.4375 LAIKIQRSNGLIHSA-p Q99661;S22-p LAIKIQRSNGLIHSA 0.894048637466895 0.0161377331038498 0.0373333333333333 -0.387666666666667 0.949549127610082 24.7453160281053 0.0373333333333334 -0.387666666666667 0.803609546351631 0.00335326902440892 0.261175036342347 -4.97343581153636 Q99661 KIF2C Q99661.S22.p_KIF2C Q99661_S22s _1_1_22_22 Q99661 Q99661 Kinesin-like protein KIF2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8130.8130.3 15.85 15.85 15.853 2 1 1 0 492.9225 1396.7858 S22s TMT10 22 (R) sNGLIHSANVR (T) S(0.99)NGLIHS(0.0)ANVR s:Phosphorylated S KIF2C 82224.4 1 1 3246.1 56.11 HUMAN 1 0.9495 -24.7453 LAIKLGFSLTPSKGK-p P38432;S301-p LAIKLGFSLTPSKGK 0.263054148508799 0.143341182728233 -0.455333333333333 0.290666666666667 10.9986796367042 11.1131179860124 -0.455333333333333 0.290666666666667 0.0794569766987923 0.0773905978069478 -2.15587802904584 2.17494638286206 P38432 COIL P38432.S301.p_COIL P38432_S301s _1_1_301_301 P38432 P38432 Coilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24733.24733.2 12.29 12.29 1.221 3 1 1 0 744.4169 1407.8612 S301s TMT10 298 (K) LGFsLTPSK (G) LGFS(0.99)LT(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S COIL 63291.8 2 11 395.1 330.42 HUMAN 1 -10.9987 11.1131 LAKAIELSLKEQRQQ-p Q92783;S183-p LAKAIELSLKEQRQQ 0.0849516654794338 0.0820660922403875 -0.344666666666667 0.263 22.911494865628 14.3901848934812 -0.344666666666667 0.263 0.00511505742130246 0.0363899543393953 -4.53353591916881 2.7631290923829 Q92783 STAM Q92783.S183.p_STAM Q92783_S183s _1_1_183_183 Q92783 Q92783|Q92783-2 Signal transducing adapter molecule 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22136.22136.2 7.61 1.66 99 1 1 1 0 656.3886 1231.8026 S183s TMT10 179 (K) AIELsLK (E) AIELS(1.0)LK K:TMT10,s:Phosphorylated S STAM 59577.9 1 3 3612.1 47.01 HUMAN 1 -22.9115 14.3902 LAKATSRSGCKVDLG-p P22102;S464-p LAKATSRSGCKVDLG 0.683208662620214 0.0299657384503019 0.098 -0.355666666666667 3.10164997836547 20.6162628845402 0.098 -0.355666666666667 0.489592777178877 0.00867708219806071 0.740984003499078 -4.00857365061922 P22102 GART P22102.S464.p_GART P22102_S464s _1_1_464_464 P22102 P22102 Trifunctional purine biosynthetic protein adenosine-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33105.33105.3 16.83 12.4 99 1 1 1 0 774.7369 2242.2306 S464s Hydrogen 464 (R) sGCKVDLGGFAGLFDLK (A) S(1.0)GCKVDLGGFAGLFDLK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S GART 109020.4 2 3 3543.1 48.65 HUMAN 1 3.1016 -20.6163 LAKAVDGYVKPQIKQ-p P42229;Y694-p LAKAVDGYVKPQIKQ 0.185666352359866 0.0559897521028893 0.495 0.363333333333333 14.3710376201978 16.6784913075216 0.495 0.363333333333333 0.0365507453817629 0.0214857673702918 2.76129987479779 3.19719752206166 P42229 STAT5A P42229.Y694.p_STAT5A P42229_Y694y _1_1_694_694 P42229 P42229|P51692|P42229-2|K7EK35|K7EM17 Signal transducer and activator of transcription 5A GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16693.16776.3 15.77 15.77 99 1 1 1 0 662.3866 1905.1776 Y694y TMT10 690 (K) AVDGyVKPQIK (Q) AVDGY(1.0)VKPQIK K:TMT10,y:Phosphorylated Y STAT5A 91215.9 5 1 225.1 15.77 HUMAN 1 14.371 16.6785 LAKDSPPTPTMYKYR-p Q9C0B5;T348-p LAKDSPPTPTMYKYR 0.188546819611632 0.868466690377742 0.235 -0.0196666666666666 14.2194345529485 0.862054604226749 0.235 -0.0196666666666666 0.0378491860769127 0.819963535919091 2.7332967379575 -0.23888599706755 Q9C0B5 ZDHHC5 Q9C0B5.T348.p_ZDHHC5 Q9C0B5_S345sT348t_2_2_345_348 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.22177.22177.4 22.23 22.23 2.217 8 2 2 0 909.4574 3474.8757 S345s T348t TMT10 328 (R) THLGLATNEDSSLLAKDsPPtPTMYK (Y) T(0.0)HLGLAT(0.0)NEDS(0.0)S(0.0)LLAKDS(0.99)PPT(0.99)PT(0.0)MY(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T ZDHHC5 78285 26 27 134.1 530.74 HUMAN 1 14.2194 -0.8621 LAKDYVCSQFPTPEA-p Q7KZ85;S576-p LAKDYVCSQFPTPEA 0.717657533496988 0.0181801212622207 -0.0603333333333333 0.371333333333333 2.7185861649411 23.9579910584676 -0.0603333333333333 0.371333333333333 0.534738413846088 0.00401976712581375 -0.662650496552668 4.77897402849592 Q7KZ85 SUPT6H Q7KZ85.S576.p_SUPT6H Q7KZ85_S576s _1_1_576_576 Q7KZ85 Q7KZ85|Q7KZ85-3 Transcription elongation factor SPT6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28551.28551.3 18.49 18.49 2.862 3 1 1 0 783.367 2268.1168 S576s TMT10 572 (K) DYVCsQFPTPEAVLEGAR (Y) DY(0.0)VCS(0.99)QFPT(0.0)PEAVLEGAR C:Carbamidomethylation,s:Phosphorylated S SUPT6H 200324.3 1 5 279.1 388.92 HUMAN 1 -2.7186 23.958 LAKGESLSLPGPSPP-p Q9BZQ8;S641-p LAKGESLSLPGPSPP 0.956762731040354 0.438495322125892 0.00933333333333332 0.0796666666666667 0.376917275411335 4.77079729813443 0.0093333333333333 0.0796666666666667 0.916871075892949 0.333365206400424 0.109342853746408 1.06167677961708 Q9BZQ8 FAM129A Q9BZQ8.S641.p_FAM129A Q9BZQ8_S641s _1_1_641_641 Q9BZQ8 Q9BZQ8 Protein Niban HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23355.23725.3 17.53 16.13 2.145 5 1 1 0 881.4455 2562.3613 S641s TMT10 637 (K) GESLsLPGPSPPPDGTEQVIISR (V) GES(0.0)LS(0.99)LPGPS(0.0)PPPDGT(0.0)EQVIIS(0.0)R s:Phosphorylated S FAM129A 104102.7 2 4 641.1 254.96 HUMAN 1 0.3769 4.7708 LAKGVSMSLPSSPLL-p Q9C0D5;S63-p LAKGVSMSLPSSPLL 0.255903152682223 0.196057108702102 0.214 -0.177333333333333 11.2474883372493 9.3065462442858 0.214 -0.177333333333333 0.0750328022372824 0.117312793246445 2.19952523332015 -1.86074700850662 Q9C0D5 TANC1 Q9C0D5.S63.p_TANC1 Q9C0D5_S63s _1_1_63_63 Q9C0D5 Q9C0D5|Q9C0D5-2 Protein TANC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27692.27692.3 15.09 14.44 2.81 4 1 1 0 583.9785 1669.9508 S63s TMT10 59 (K) GVSMsLPSSPLLPR (Q) GVS(0.0)MS(0.99)LPS(0.0)S(0.0)PLLPR s:Phosphorylated S TANC1 204383.7 2 1 678.1 246.63 HUMAN 1 11.2475 -9.3065 LAKLIQESPTVELKD-p Q86XR8;S388-p LAKLIQESPTVELKD 0.145152146047681 0.0458956443964965 -0.406333333333333 0.238666666666667 17.0868233192427 17.9058261910432 -0.406333333333333 0.238666666666667 0.0195576949550976 0.0161963584909019 -3.27975500550156 3.44043333241583 Q86XR8 CEP57 Q86XR8.S388.p_CEP57 Q86XR8_S388s _1_1_388_388 Q86XR8 Q86XR8|Q86XR8-5|Q86XR8-4|Q86XR8-2|F5GYW0 Centrosomal protein of 57 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22456.22456.3 8.42 7.01 1.673 2 1 1 0 599.0046 1715.0355 S388s TMT10 384 (K) LIQEsPTVELK (D) LIQES(0.99)PT(0.0)VELK K:TMT10,s:Phosphorylated S CEP57 57430.3 1 2 5018.1 23.87 HUMAN 1 -17.0868 17.9058 LAKQIFHSKESIVAT-p Q6P0N0;S253-p LAKQIFHSKESIVAT 0.628959461918082 0.0421452937324321 -0.0673333333333334 -0.409333333333333 3.74184153352763 18.4243765450215 -0.0673333333333334 -0.409333333333333 0.422489428607757 0.0143734937840643 -0.867449115507314 -3.54567647907326 Q6P0N0 MIS18BP1 Q6P0N0.S253.p_MIS18BP1 Q6P0N0_S253sS256s_2_2_253_256 Q6P0N0 Q6P0N0|G5E9K5|Q6P0N0-2 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19051.19051.4 7.78 7.78 7.78 4 2 2 0 609.8274 2276.3581 S253s S256s TMT10 249 (K) QIFHsKEsIVATTK (S) QIFHS(0.99)KES(0.99)IVAT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S MIS18BP1 129996 1 40 54.1 728.39 HUMAN 1 -3.7418 -18.4244 LALDMEISAYRKLLE-p P20700;S375-p LALDMEISAYRKLLE 0.932495418439431 0.00991769079995784 0.0176666666666667 0.468333333333333 0.599814504475052 28.1719387789897 0.0176666666666667 0.468333333333333 0.871000791280384 0.00152337253746075 0.170246263340828 5.88605654904612 P20700 LMNB1 P20700.S375.p_LMNB1 P20700_S375s _1_1_375_375 P20700 P20700|E9PBF6 Lamin-B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23934.24140.3 13.15 8.34 13.147 2 1 1 0 650.0175 1868.0716 S375s TMT10 368 (K) LALDMEIsAYRK (L) LALDMEIS(0.99)AY(0.0)RK K:TMT10,s:Phosphorylated S LMNB1 66692.5 8 9 440.1 312.01 HUMAN 1 0.5998 28.1719 LALDSRVSPPAPGSA-p Q13459;S1261-p LALDSRVSPPAPGSA 0.258179771699293 0.92514139499612 -0.183666666666667 0.015 11.1742588821937 0.477428579710334 -0.183666666666667 0.015 0.0763087099858555 0.89589506030553 -2.18666654097748 0.137105166663358 Q13459 MYO9B Q13459.S1261.p_MYO9B Q13459_S1261sS1267sT1271t_3_3_1261_1271 Q13459 Q13459|M0R0P8|Q13459-2 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19682.19682.5 7.67 7.67 1.171 9 3 3 0 939.4658 4453.3727 S1261s S1267s T1271t TMT10 1237 (K) TLPSGSPRPGQLERPTSLALDSRVsPPAPGsAPEtPEDK (S) T(0.0)LPS(0.0)GS(0.0)PRPGQLERPT(0.0)S(0.0)LALDS(0.0)RVS(0.99)PPAPGS(0.99)APET(0.99)PEDK K:TMT10,s:Phosphorylated S,t:Phosphorylated T MYO9B 244993.9 1 33 211.1 438.12 HUMAN 1 -11.1743 0.4774 LALQPGGSPSAAGAD-p Q96EB6;S14-p LALQPGGSPSAAGAD 0.832987870919974 0.0193707350000233 -0.0456666666666667 0.398 1.53245202692824 23.5338486207719 -0.0456666666666667 0.398 0.702675477245377 0.00443215701985635 -0.402576569617862 4.67637945304714 Q96EB6 SIRT1 Q96EB6.S14.p_SIRT1 Q96EB6_S14s _1_1_14_14 Q96EB6 Q96EB6|Q96EB6-2 NAD-dependent protein deacetylase sirtuin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20776.20776.4 23.56 23.56 2.854 4 1 1 0 803.8768 3132.5192 S14s Acetyl 2 (M) ADEAALALQPGGsPSAAGADREAASSPAGEPLR (K) ADEAALALQPGGS(0.99)PS(0.0)AAGADREAAS(0.0)S(0.0)PAGEPLR s:Phosphorylated S SIRT1 82763.6 8 1 475.1 301.26 HUMAN 1 -1.5325 23.5338 LALSTNRTGSEMLQE-p Q86U38;T105-p LALSTNRTGSEMLQE 0.525001437707283 0.0830945086271001 0.0846666666666667 0.244666666666667 5.17895911295103 14.304422440515 0.0846666666666667 0.244666666666667 0.303461841344535 0.037115708564429 1.13675445062045 2.74729259869417 Q86U38 NOP9 Q86U38.T105.p_NOP9 Q86U38_T105tS107s_2_2_105_107 Q86U38 Q86U38|Q86U38-2 Nucleolar protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33219.33219.3 7.98 6.5 5.233 3 2 2 0 795.3926 2208.235 T105t S107s M109m TMT10 105 (R) tGsEmLQELLGFSPLK (P) T(0.99)GS(0.99)EM(1.0)LQELLGFS(0.0)PLK K:TMT10,t:Phosphorylated T,s:Phosphorylated S,m:Oxidized methionine NOP9 70178.2 1 2 5090.1 23.11 HUMAN 1 5.179 14.3044 LALSTRYSPDEMNNS-p Q14687;S850-p LALSTRYSPDEMNNS 0.30610406995389 0.158409733807383 -0.154666666666667 -0.157 9.6361552989551 10.5258687929893 -0.154666666666667 -0.157 0.108738783505175 0.0885957972715226 -1.91856157221388 -2.07235041197951 Q14687 GSE1 Q14687.S850.p_GSE1 Q14687_S850s _1_1_850_850 Q14687 Q14687|Q14687-3|Q14687-2 Genetic suppressor element 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20662.20662.3 18.69 15.14 1.521 5 1 1 0 994.1433 2900.45 S850s TMT10 843 (R) LALSTRYsPDEMNNSPNFEEK (K) LALS(0.0)T(0.0)RY(0.0)S(0.99)PDEMNNS(0.0)PNFEEK K:TMT10,s:Phosphorylated S GSE1 136446.7 3 11 221.1 428.09 HUMAN 1 -9.6362 -10.5259 LALVRNRSFSLKNVK-p O00148;S183-p LALVRNRSFSLKNVK 0.771946133060809 0.222383711834155 -0.0406666666666667 0.161333333333333 2.15245873968273 8.59863899460737 -0.0406666666666667 0.161333333333333 0.609191908192274 0.138081692145557 -0.542306524346459 1.73829004383088 O00148 DDX39A O00148.S183.p_DDX39A O00148_S183s _1_1_183_183 O00148 O00148|O00148-2|O00148-3 ATP-dependent RNA helicase DDX39A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11508.11508.3 9.2 9.2 1.646 2 1 1 0 463.9267 1309.7992 S183s TMT10 181 (R) NRsFSLK (N) NRS(0.99)FS(0.0)LK K:TMT10,s:Phosphorylated S DDX39A 49642.1 1 3 2765.1 71.37 HUMAN 1 -2.1525 8.5986 LANRLRLSWPTRSGR-p Q9NPH2;S86-p LANRLRLSWPTRSGR 0.241925315986191 0.907630799134866 -0.188333333333333 0.0176666666666667 11.7863232049985 0.589250238655119 -0.188333333333333 0.0176666666666667 0.066277738241534 0.873122090240579 -2.29449066289219 0.167399599078025 Q9NPH2 ISYNA1 Q9NPH2.S86.p_ISYNA1 Q9NPH2_S86s _1_1_86_86 Q9NPH2 Q9NPH2|J3QRH1 Inositol-3-phosphate synthase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20036.20036.3 9.26 9.26 9.258 2 1 1 0 446.5815 1257.7629 S86s TMT10 83 (R) LRLsWPTR (S) LRLS(0.99)WPT(0.0)R s:Phosphorylated S ISYNA1 61580.2 1 1 3499.1 49.68 HUMAN 1 -11.7863 0.5893 LANVAGLTPPATPPH-p Q5VV67;T1229-p LANVAGLTPPATPPH 0.16127524660131 0.753957558638358 -0.256333333333333 -0.0343333333333333 15.8671956012499 1.69458123525837 -0.256333333333333 -0.0343333333333333 0.0258988475888416 0.676927061886218 -3.04273177320077 -0.440001448172184 Q5VV67 PPRC1 Q5VV67.T1229.p_PPRC1 Q5VV67_T1229tT1233t_2_2_1229_1233 Q5VV67 Q5VV67|Q5VV67-2|X6R7H2 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36827.36827.5 22.08 22.08 9.466 3 2 2 0 872.8895 4200.488 T1229t T1233t TMT10 1217 (R) LQAPELANVAGLtPPAtPPHQLWKPLAAVSLLAK (A) LQAPELANVAGLT(0.99)PPAT(0.99)PPHQLWKPLAAVS(0.0)LLAK K:TMT10,t:Phosphorylated T PPRC1 179024.3 4 12 1130.1 174.25 HUMAN 1 -15.8672 -1.6946 LANVNIGSLICNVGA-p P05386;S58-p LANVNIGSLICNVGA 0.375644567259488 0.134477971788151 -0.134666666666667 -0.322666666666667 7.86190578897035 11.4845184180321 -0.134666666666667 -0.322666666666667 0.163609840442121 0.0710473948916132 -1.61119549286893 -2.24015998546351 P05386 RPLP1 P05386.S58.p_RPLP1 P05386_S58s _1_1_58_58 P05386 P05386 60S acidic ribosomal protein P1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32037.32037.5 24.03 19.4 4.026 3 1 1 0 870.2457 4267.2545 S58s TMT10 50 (K) ALANVNIGsLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEK (K) ALANVNIGS(0.99)LICNVGAGGPAPAAGAAPAGGPAPS(0.0)T(0.0)AAAPAEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RPLP1 11627.8 1 3 1134.2 173.84 HUMAN 1 -7.8619 -11.4845 LANYFKVSPKPKNNE-p Q96QE3;S1244-p LANYFKVSPKPKNNE 0.21069800027452 0.000952253650599092 -0.251666666666667 -1.591 13.0554249648398 56.6267632477721 -0.251666666666667 -1.591 0.0494831688394387 2.17432107433764e-06 -2.5210590182283 -20.8771979025965 Q96QE3 ATAD5 Q96QE3.S1244.p_ATAD5 Q96QE3_S1244s _1_1_1244_1244 Q96QE3 Q96QE3 ATPase family AAA domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19884.19884.3 13.59 6.1 5.518 3 1 1 0 830.4954 2409.504 S1244s TMT10 1236 (K) TLANYFKVsPKPK (N) T(0.0)LANY(0.0)FKVS(0.99)PKPK K:TMT10,s:Phosphorylated S ATAD5 209620.3 2 34 316.2 367.51 HUMAN 1 -13.0554 -56.6268 LAPAPPATPAPAGTP-p Q86Y97;T416-p LAPAPPATPAPAGTP 0.769192567611738 0.429291214097477 0.0596666666666667 -0.089 2.18421793435323 4.88963523074222 0.0596666666666667 -0.089 0.604753243853108 0.324366860175363 0.549222679721086 -1.08357892084754 Q86Y97 SUV420H2 Q86Y97.T416.p_SUV420H2 Q86Y97_T416tT422t_2_2_416_422 Q86Y97 Q86Y97|A0A0D9SF94 Histone-lysine N-methyltransferase KMT5C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31470.31470.3 10.18 10.18 99 2 2 2 0 889.1537 2505.5209 T416t T422t TMT10 409 (R) LAPAPPAtPAPAGtPGPILIPK (Q) LAPAPPAT(1.0)PAPAGT(1.0)PGPILIPK K:TMT10,t:Phosphorylated T KMT5C 53024.9 1 4 4390.1 32.15 HUMAN 1 2.1842 -4.8896 LAPAVPQSPLKNELR-p Q8NCD3;S140-p LAPAVPQSPLKNELR 0.559650540314703 0.0140943537235631 0.0846666666666667 -0.444333333333333 4.65289839971845 25.6677741188397 0.0846666666666667 -0.444333333333333 0.342539106087257 0.00271158103722274 1.04004780982762 -5.20818808070378 Q8NCD3 HJURP Q8NCD3.S140.p_HJURP Q8NCD3_S140s _1_1_140_140 Q8NCD3 Q8NCD3 Holliday junction recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27944.27944.3 33.3 33.3 9.673 5 1 1 0 1311.6659 3853.002 S140s TMT10 116 (K) SGEVDATSDQEESVAWALAPAVPQsPLKNELR (R) S(0.0)GEVDAT(0.0)S(0.0)DQEES(0.0)VAWALAPAVPQS(0.99)PLKNELR K:TMT10,s:Phosphorylated S HJURP 84336.4 4 2 596.1 263.83 HUMAN 1 4.6529 -25.6678 LAPEGRGSPVPGKSG-p E7EP72;S47-p LAPEGRGSPVPGKSG 0.396714483859368 0.233481774788753 0.131 -0.171333333333333 7.41301215837979 8.31923347349153 0.131 -0.171333333333333 0.181425690289157 0.147257238742098 1.53313252592782 -1.68994036875113 E7EP72 NotFound E7EP72.S47.p_NotFound E7EP72_S47s _1_1_47_47 E7EP72 E7EP72 UPF0449 protein C19orf25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27043.27043.4 17.4 17.4 1.34 2 1 1 0 725.8862 2820.566 S47s TMT10 29 (R) GAPAEDPVFTILAPEGRGsPVPGK (S) GAPAEDPVFT(0.0)ILAPEGRGS(0.99)PVPGK K:TMT10,s:Phosphorylated S C19orf25 17112 2 1 5660.1 17.4 HUMAN 1 7.413 -8.3192 LAPGAADSDEDTEGF-p Q66K74;S809-p LAPGAADSDEDTEGF 0.864452920207644 0.951743722276382 0.0266666666666667 -0.00633333333333332 1.23424614541217 0.305752926984077 0.0266666666666667 -0.00633333333333332 0.752619359583245 0.932018874230536 0.331646689409441 -0.0893401896597441 Q66K74 MAP1S Q66K74.S809.p_MAP1S Q66K74_S809s _1_1_809_809 Q66K74 Q66K74|Q66K74-2 Microtubule-associated protein 1S HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31749.32162.4 24.31 17.99 2.195 10 1 1 0 1226.8239 4824.3061 S809s TMT10 774 (R) AGGLGAEETPPTSVSESLPTLSDSDPVPLAPGAADsDEDTEGFGVPR (H) AGGLGAEET(0.0)PPT(0.0)S(0.0)VS(0.0)ES(0.0)LPT(0.0)LS(0.0)DS(0.0)DPVPLAPGAADS(0.99)DEDT(0.0)EGFGVPR s:Phosphorylated S MAP1S 113179.3 2 13 456.1 307.14 HUMAN 1 1.2342 -0.3058 LAPGSPASPPGSLEP-p P25440;S301-p LAPGSPASPPGSLEP 0.949207015586855 0.568089684240398 -0.00966666666666668 -0.054 0.448669424839109 3.30993647239273 -0.00966666666666669 -0.054 0.901847399910905 0.466666206551301 -0.129224618224422 -0.782574029600474 P25440 BRD2 P25440.S301.p_BRD2 P25440_S301s _1_1_301_301 P25440 P25440-2|A0A0G2JK44|P25440-3|P25440-4|E9PIQ3 Bromodomain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19390.19390.4 15.44 16.61 1.199 8 1 1 0 907.2558 3546.0146 S301s TMT10 281 (K) RKADTTTPTPTAILAPGSPAsPPGSLEPK (A) RKADT(0.0)T(0.0)T(0.0)PT(0.0)PT(0.0)AILAPGS(0.0)PAS(0.99)PPGS(0.0)LEPK K:TMT10,s:Phosphorylated S BRD2 88344.5 12 2 1414.1 145 HUMAN 1 -0.4487 -3.3099 LAPGVDPSPPHRSFC-p P0CI01;S133-p LAPGVDPSPPHRSFC 0.272868302810421 0.385479553266478 0.347 -0.0833333333333333 10.6850349657014 5.50333516607482 0.347 -0.0833333333333333 0.0854075971096864 0.28162193839082 2.10101725261466 -1.19528696526654 P0CI01 NotFound P0CI01.S133.p_NotFound P0CI01_S133s _1_1_133_133 P0CI01 P0CI01|A0A096LNU6|A0A0J9YWM7|A0A0J9YYB4|Q8NFV5|A6NNV3 Putative speedy protein E6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15125.15125.3 13.19 13.19 6.857 2 1 1 0 715.0134 2063.0508 S133s TMT10 121 (K) DFNSQLAPGVDPsPPHR (S) DFNS(0.0)QLAPGVDPS(0.99)PPHR s:Phosphorylated S SPDYE6 48690.9 1 1 5524.1 18.53 HUMAN 1 10.685 -5.5033 LAPLPLPSPTSPGFQ-p Q96L91;S98-p LAPLPLPSPTSPGFQ 0.869109032102365 0.297819382428381 -0.0253333333333333 -0.110666666666667 1.18979647558437 6.94355405968142 -0.0253333333333334 -0.110666666666667 0.760361909119184 0.202136431313183 -0.3208319197746 -1.45073142056401 Q96L91 EP400 Q96L91.S98.p_EP400 Q96L91_S98s_1_1_98_98 Q96L91 Q96L91|Q96L91-2|Q96L91-5|Q96L91-3|Q96L91-4|A0A0A0MR80 E1A-binding protein p400 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36218.36218.4 26.71 24.48 1.413 9 1 1 0 1270.4204 4997.6686 N86n S98s TMT10 65 (R) SPATGQNVNITLQSVGPVVGGnQQITLAPLPLPsPTSPGFQFSAQPR (R) S(0.0)PAT(0.0)GQN(0.0)VN(0.0)IT(0.0)LQS(0.0)VGPVVGGN(0.99)QQIT(0.0)LAPLPLPS(0.99)PT(0.0)S(0.0)PGFQFS(0.0)AQPR n:Deamidated,s:Phosphorylated S EP400 344909.2 4 6 91.1 620.97 HUMAN 1 -1.1898 -6.9436 LAPPPLLSPLLPSIK-p Q14676;S1068-p LAPPPLLSPLLPSIK 0.73099182223231 0.0215379261896303 0.0533333333333333 -0.314 2.58287999326297 22.7889371186529 0.0533333333333333 -0.314 0.551711454379562 0.00526146018282617 0.634337994539903 -4.49972891386872 Q14676 MDC1 Q14676.S1068.p_MDC1 Q14676_S1068s _1_1_1068_1068 Q14676 Q14676|Q14676-2|Q14676-3 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29757.29757.4 18.2 13.59 6.735 3 1 1 0 671.9075 2604.6369 S1068s TMT10 1060 (K) HLAPPPLLsPLLPSIKPTVR (K) HLAPPPLLS(0.99)PLLPS(0.0)IKPT(0.0)VR K:TMT10,s:Phosphorylated S MDC1 227803.2 2 28 6.1 1662.62 HUMAN 1 2.5829 -22.7889 LAPRLGISLQLVAVD-p Q7Z7A3;S81-p LAPRLGISLQLVAVD 0.819842974577855 0.187834387777523 0.0483333333333333 0.245666666666667 1.66202992754521 9.55342209711186 0.0483333333333333 0.245666666666667 0.682019838039301 0.110830116638175 0.432583488896978 1.90348642807816 Q7Z7A3 CTU1 Q7Z7A3.S81.p_CTU1 Q7Z7A3_S81s _1_1_81_81 Q7Z7A3 Q7Z7A3 Cytoplasmic tRNA 2-thiolation protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20976.21177.4 7.31 7.31 7.306 2 1 1 0 670.1177 2597.4976 S81s TMT10 73 (R) ALAPRLGIsLQLVAVDEGIGGYR (D) ALAPRLGIS(0.99)LQLVAVDEGIGGY(0.0)R s:Phosphorylated S CTU1 37248.1 1 2 5289.1 20.95 HUMAN 1 1.662 9.5534 LAQALLDSEEENDRA-p Q8TEB1-2;S49-p LAQALLDSEEENDRA 0.213229385106179 0.104838730830942 0.212666666666667 0.223666666666667 12.9476689783331 12.9407444977191 0.212666666666667 0.223666666666667 0.050726290227943 0.050807233781111 2.50164141570432 2.49903120797677 Q8TEB1 DCAF11 Q8TEB1.2.S49.p_DCAF11 Q8TEB1-2_S49s _1_1_49_49 Q8TEB1-2 Q8TEB1-2 Isoform 2 of DDB1- and CUL4-associated factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24098.24098.4 15.07 15.07 15.065 2 1 1 0 1022.689 4007.77 S49s TMT10 29 (R) RSEEEEEEDEDVDLAQALLDsEEENDRAWDGR (L) RS(0.0)EEEEEEDEDVDLAQALLDS(0.99)EEENDRAWDGR s:Phosphorylated S DCAF11 59472.8 2 1 4640.1 28.46 HUMAN 1 12.9477 12.9407 LAQHERGSLASLDSL-p O60716-3;S346-p LAQHERGSLASLDSL 0.885820345057877 0.0575574640579441 -0.0276666666666667 0.341666666666667 1.03530648154083 16.5168436546275 -0.0276666666666667 0.341666666666667 0.787896827623863 0.0223005530974847 -0.282711388833892 3.16574248677385 O60716 CTNND1 O60716.3.S346.p_CTNND1 O60716-3_S346s _1_1_346_346 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-24 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26714.26714.5 29.71 26.88 1.627 8 1 1 0 936.6562 4599.2866 S346s TMT10 320 (R) SYEDMIGEEVPSDQYYWAPLAQHERGsLASLDSLRK (G) S(0.0)Y(0.0)EDMIGEEVPS(0.0)DQY(0.0)Y(0.0)WAPLAQHERGS(0.99)LAS(0.0)LDS(0.0)LRK K:TMT10,s:Phosphorylated S CTNND1 105545.3 9 23 21.1 1014.17 HUMAN 1 -1.0353 16.5168 LAQKKPFTPVKYFSI-p K7ER00;T386-p LAQKKPFTPVKYFSI 0.432856195021383 0.0421918828246993 -0.299666666666667 0.431666666666667 6.6977608889619 18.4153798740245 -0.299666666666667 0.431666666666667 0.213906465216126 0.0144033002018342 -1.40799706653904 3.54383739575577 K7ER00 NotFound K7ER00.T386.p_NotFound K7ER00_T386t _1_1_386_386 K7ER00 K7ER00|Q9Y285|Q9Y285-2 Phenylalanine--tRNA ligase alpha subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13601.13601.3 7.24 3.06 99 1 1 1 0 528.6556 1503.9866 T386t TMT10 383 (K) KPFtPVK (Y) KPFT(1.0)PVK K:TMT10,t:Phosphorylated T FARSA 62451.2 1 4 2453.1 82.83 HUMAN 1 -6.6978 18.4154 LAQPERGSMGSLDRL-p O00192;S332-p LAQPERGSMGSLDRL 0.471566782528917 0.0609902697058409 0.097 0.290333333333333 6.02470223504953 16.180716626812 0.097 0.290333333333333 0.249763962873385 0.0240950780439281 1.28896290778026 3.10074538749856 O00192 ARVCF O00192.S332.p_ARVCF O00192_S332sS335s_2_2_332_335 O00192 O00192|E9PDC3|O00192-2|C9JJX6 Armadillo repeat protein deleted in velo-cardio-facial syndrome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28236.28236.5 16.94 16.94 2.651 5 2 2 0 979.4601 4733.3137 S332s S335s TMT10 300 (R) AYEDTADDGGELADERPAFPMVTAPLAQPERGsMGsLDRLVR (R) AY(0.0)EDT(0.0)ADDGGELADERPAFPMVT(0.0)APLAQPERGS(0.99)MGS(0.99)LDRLVR s:Phosphorylated S ARVCF 105324.7 4 11 772.1 227.53 HUMAN 1 6.0247 16.1807 LAQPLVFSNSKQTAI-p Q14157-5;S317-p LAQPLVFSNSKQTAI 0.984856677723395 0.183771933753545 0.00366666666666665 -0.148 0.13440405517665 9.67498968498553 0.00366666666666665 -0.148 0.969526299896601 0.107770781337651 0.0400015623550484 -1.9245462516763 Q14157 UBAP2L Q14157.5.S317.p_UBAP2L Q14157-5_S317s_1_1_317_317 Q14157-5 Q14157-5|F8W726|Q14157-3|Q14157-1|Q14157-4 Isoform 5 of Ubiquitin-associated protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25663.25663.4 17.75 17.75 2.393 9 1 1 0 926.4523 3620.8154 N297n N301n S317s TMT10 291 (K) TPSTMEnDSSnLDPSQAPSLAQPLVFsNSK (Q) T(0.0)PS(0.0)T(0.0)MEN(0.99)DS(0.0)S(0.0)N(0.99)LDPS(0.0)QAPS(0.0)LAQPLVFS(0.99)N(0.0)S(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S UBAP2L 116866.1 2 7 189.1 467.5 HUMAN 1 0.1344 -9.675 LAQPQYQSPQQPPQT-p Q9BYJ9;S319-p LAQPQYQSPQQPPQT 0.606672106590353 0.207208160030084 0.115 -0.165333333333333 4.01466234630207 8.99114203216642 0.115 -0.165333333333333 0.396765375302954 0.126149576473432 0.91993129145356 -1.80618042057562 Q9BYJ9 YTHDF1 Q9BYJ9.S319.p_YTHDF1 Q9BYJ9_S319s _1_1_319_319 Q9BYJ9 Q9BYJ9|Q9BYJ9-2 YTH domain-containing family protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22303.22303.5 19.52 13.76 1.293 4 1 1 0 1014.1255 4986.6176 S319s TMT10 283 (K) APVPQQAPSPQAAPQPQQVAQPLPAQPPALAQPQYQsPQQPPQTR (W) APVPQQAPS(0.0)PQAAPQPQQVAQPLPAQPPALAQPQY(0.0)QS(0.99)PQQPPQT(0.0)R s:Phosphorylated S YTHDF1 61043.7 1 12 1868.2 109.97 HUMAN 1 4.0147 -8.9911 LAQQGEYSEAIPILR-p Q14318-2;S324-p LAQQGEYSEAIPILR 0.428800530001446 0.0171345631596115 0.166666666666667 -0.335333333333333 6.7706411490314 24.3649139645141 0.166666666666667 -0.335333333333333 0.21034678818373 0.00366023191553064 1.42080236083142 -4.8788177934571 Q14318 FKBP8 Q14318.2.S324.p_FKBP8 Q14318-2_S324s _1_1_324_324 Q14318-2 Q14318-2|Q14318-3|A0A0A0MTJ1 Isoform 2 of Peptidyl-prolyl cis-trans isomerase FKBP8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28263.28263.3 16.67 16.67 2.901 2 1 1 0 699.3729 2016.1327 S324s TMT10 316 (K) VLAQQGEYsEAIPILR (A) VLAQQGEY(0.0)S(0.99)EAIPILR s:Phosphorylated S FKBP8 45104.4 1 2 4463.1 30.99 HUMAN 1 6.7706 -24.3649 LAQQRGDSEDGSPSG-p Q9HAS0;S55-p LAQQRGDSEDGSPSG 0.924259199426179 0.0752585608971373 0.0326666666666667 0.393333333333333 0.674350464867777 14.9113179186628 0.0326666666666667 0.393333333333333 0.856179753237459 0.0322751454511216 0.190071879713194 2.85998252592632 Q9HAS0 C17orf75 Q9HAS0.S55.p_C17orf75 Q9HAS0_S55s _1_1_55_55 Q9HAS0 Q9HAS0|J9JIC5 Protein Njmu-R1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28205.28205.4 25.87 25.87 1.113 10 1 1 0 1225.3163 4818.2663 S55s TMT10 48 (R) LAQQRGDsEDGSPSGTNAETPSGDDFSLSLADTNLPSEVEPELR (S) LAQQRGDS(0.99)EDGS(0.0)PS(0.0)GT(0.0)NAET(0.0)PS(0.0)GDDFS(0.0)LS(0.0)LADT(0.0)NLPS(0.0)EVEPELR s:Phosphorylated S C17orf75 45305.4 3 3 2125.1 96.67 HUMAN 1 0.6744 14.9113 LAQRRAQSIERKQES-p O14681;S56-p LAQRRAQSIERKQES 0.498143427920421 0.0660071503440806 0.265333333333333 -0.459333333333333 5.57637787922361 15.7026774202568 0.265333333333333 -0.459333333333333 0.276925030411611 0.0268987598733969 1.20871256281301 -3.00922963593782 O14681 EI24 O14681.S56.p_EI24 O14681_S56s _1_1_56_56 O14681 O14681|O14681-3|E9PK61 Etoposide-induced protein 2.4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5698.5698.3 8.17 4.82 3.18 2 1 1 0 699.3665 2016.1238 S56s TMT10 54 (R) AQsIERKQESEPR (I) AQS(0.99)IERKQES(0.0)EPR K:TMT10,s:Phosphorylated S EI24 39249.3 6 2 3055.1 62.02 HUMAN 1 5.5764 -15.7027 LAQVLDQSARARLSN-p O14737;S51-p LAQVLDQSARARLSN 0.128346533857537 0.152884399832324 -0.277666666666667 -0.165333333333333 18.4638275507918 10.7278219210034 -0.277666666666667 -0.165333333333333 0.0142435172186273 0.0845702876761934 -3.55675085479833 -2.10756831526032 O14737 PDCD5 O14737.S51.p_PDCD5 O14737_S51s _1_1_51_51 O14737 O14737-2|K7EQA1|K7ESJ4 Programmed cell death protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26739.26739.3 18.18 18.18 18.183 2 1 1 0 575.3029 1643.9278 S51s TMT10 41 (R) NSILAQVLDQsAR (A) NS(0.0)ILAQVLDQS(0.99)AR s:Phosphorylated S PDCD5 14284.8 2 2 2922.1 65.91 HUMAN 1 -18.4638 -10.7278 LAQYADVTDEEDEAD-p Q96MW1;T139-p LAQYADVTDEEDEAD 0.817445194934181 0.544120842159125 0.0336666666666667 0.072 1.68236012674794 3.55386746027632 0.0336666666666667 0.072 0.67883462696827 0.441177396999383 0.437249936103095 0.830699265388127 Q96MW1 CCDC43 Q96MW1.T139.p_CCDC43 Q96MW1_T139t _1_1_139_139 Q96MW1 Q96MW1 Coiled-coil domain-containing protein 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22937.22937.4 29.24 29.24 7.521 6 1 1 0 1179.0712 4633.3121 T139t TMT10 128 (R) KAALLAQYADVtDEEDEADEKDDSGATTMNIGSDK (L) KAALLAQY(0.0)ADVT(0.99)DEEDEADEKDDS(0.0)GAT(0.0)T(0.0)MNIGS(0.0)DK K:TMT10,t:Phosphorylated T CCDC43 25304.8 19 1 2052.1 100.39 HUMAN 1 1.6824 3.5539 LARDLVDSVDDAEGL-p Q6ZNE5;S29-p LARDLVDSVDDAEGL 0.10892597518252 0.0213991049855669 0.326333333333333 0.388 20.1711779007035 22.830357705365 0.326333333333333 0.388 0.00961351503670624 0.00521151784824742 3.91578367005722 4.50943584023647 Q6ZNE5 ATG14 Q6ZNE5.S29.p_ATG14 Q6ZNE5_S29s _1_1_29_29 Q6ZNE5 Q6ZNE5 Beclin 1-associated autophagy-related key regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27314.27523.2 20 15.23 11.943 2 1 1 0 1137.5392 2194.1077 S29s TMT10 25 (R) DLVDsVDDAEGLYVAVER (C) DLVDS(0.99)VDDAEGLY(0.0)VAVER s:Phosphorylated S ATG14 56050 5 1 5372.1 20 HUMAN 1 20.1712 22.8304 LARKRRNSRDGDPLP-p P53602;S96-p LARKRRNSRDGDPLP 0.857801951607827 0.0285536998641696 0.026 0.281333333333333 1.29903664237943 20.9179866790806 0.026 0.281333333333333 0.741474697933979 0.00809471070268107 0.347293394928944 4.07475054502581 P53602 MVD P53602.S96.p_MVD P53602_S96s _1_1_96_96 P53602 P53602 Diphosphomevalonate decarboxylase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10640.10640.3 14.23 9.31 5.913 4 1 1 0 776.3904 2247.1916 S96s TMT10 94 (R) RNsRDGDPLPSSLSCK (V) RNS(0.99)RDGDPLPS(0.0)S(0.0)LS(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MVD 43917.3 20 2 2644.1 75.36 HUMAN 1 1.299 20.918 LARKRSLSESSVIMD-p Q9H2Y7;S861-p LARKRSLSESSVIMD 0.0482466396076474 0.00143226560720321 -0.573333333333333 -0.953333333333333 29.221017582762 45.9124367844086 -0.573333333333333 -0.953333333333333 0.00119646015936387 2.56304553288684e-05 -6.19857337678347 -13.1394655478829 Q9H2Y7 ZNF106 Q9H2Y7.S861.p_ZNF106 Q9H2Y7_S861s _1_1_861_861 Q9H2Y7 Q9H2Y7|Q9H2Y7-2|A0A0C4DGM5 Zinc finger protein 106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17509.17509.2 10.75 4.8 2.175 4 1 1 0 766.8649 1452.7566 S861s TMT10 859 (R) SLsESSVIMDR (A) S(0.0)LS(0.99)ES(0.0)S(0.0)VIMDR s:Phosphorylated S ZNF106 210818.9 8 4 170.1 490.3 HUMAN 1 -29.221 -45.9124 LARPTRLSLGDPKAS-p P35568;S862-p LARPTRLSLGDPKAS 0.149214344489706 0.0421423977999033 -0.237 -0.388 16.6515514583941 18.4281776927527 -0.237 -0.388 0.0216194605972184 0.014360918936202 -3.1943164108199 -3.54645364435887 P35568 IRS1 P35568.S862.p_IRS1 P35568_S862s _1_1_862_862 P35568 P35568 Insulin receptor substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14043.14043.4 8.87 5.58 2.146 2 1 1 0 491.2878 1882.1638 S862s TMT10 855 (R) LARPTRLsLGDPK (A) LARPT(0.0)RLS(0.99)LGDPK K:TMT10,s:Phosphorylated S IRS1 132786.8 1 15 229.1 423.14 HUMAN 1 -16.6516 -18.4282 LARRRSPSFDTSTAT-p A7MBM2;S1175-p LARRRSPSFDTSTAT 0.651183474642633 0.642778342088419 0.067 0.0476666666666667 3.49506669688715 2.61556619626953 0.067 0.0476666666666666 0.447191283984329 0.547574708167212 0.819290725422583 0.641102536493948 A7MBM2 DISP2 A7MBM2.S1175.p_DISP2 A7MBM2_S1175s _1_1_1175_1175 A7MBM2 A7MBM2 Protein dispatched homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12365.12365.2 13.32 10.39 2.546 7 1 1 0 883.934 1686.8951 S1175s TMT10 1173 (R) SPsFDTSTATSK (L) S(0.0)PS(0.99)FDT(0.0)S(0.0)T(0.0)AT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S DISP2 154339.7 6 1 2793.1 70.42 HUMAN 1 3.4951 2.6156 LARVVQGSPEVPGIT-p Q8N201;S1395-p LARVVQGSPEVPGIT 0.632464430366418 0.192373415323402 -0.07 0.181333333333333 3.70683053739577 9.41102779922264 -0.07 0.181333333333333 0.42590912640509 0.114524187698251 -0.860658073926913 1.87883093978154 Q8N201 INTS1 Q8N201.S1395.p_INTS1 Q8N201_S1395s _1_1_1395_1395 Q8N201 Q8N201 Integrator complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20080.20080.2 9.72 9.72 3.108 2 1 1 0 873.9702 1666.9689 S1395s TMT10 1391 (R) VVQGsPEVPGITVR (V) VVQGS(0.99)PEVPGIT(0.0)VR s:Phosphorylated S INTS1 246518.1 1 9 604.1 262.74 HUMAN 1 -3.7068 9.411 LARYLGGSMDLSTFD-p O95983;S56-p LARYLGGSMDLSTFD 0.567225206981288 0.568662466865634 -0.0876666666666667 -0.079 4.53760691608981 3.30292043731607 -0.0876666666666667 -0.079 0.351754213533711 0.467420715929216 -1.01859658078744 -0.781178875651251 O95983 MBD3 O95983.S56.p_MBD3 O95983_S56s _1_1_56_56 O95983 O95983|O95983-2 Methyl-CpG-binding domain protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.30828.30828.2 17.3 10.02 3.251 4 1 1 0 959.4362 1837.8992 S56s TMT10 52 (R) YLGGsMDLSTFDFR (T) Y(0.0)LGGS(0.99)MDLS(0.0)T(0.0)FDFR s:Phosphorylated S MBD3 33071.7 6 2 2405.1 84.93 HUMAN 1 -4.5376 -3.3029 LASDDRPSPPRGLVA-p A0A0A0MR66;S788-p LASDDRPSPPRGLVA 0.260386657049657 0.0551761669185599 0.176 0.357333333333333 11.0779209052072 16.7661483493812 0.176 0.357333333333333 0.078020352739665 0.0210564505656995 2.16976606830921 3.21430927134469 A0A0A0MR66 RBM10 A0A0A0MR66.S788.p_RBM10 A0A0A0MR66_S788s _1_1_788_788 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2|P98175-3|P98175-4 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7045.7253.3 10.76 10.76 1.226 2 1 1 0 507.2545 1439.7804 S788s TMT10 781 (K) LASDDRPsPPR (G) LAS(0.0)DDRPS(0.99)PPR s:Phosphorylated S RBM10 110706.4 2 12 270.1 394.36 HUMAN 1 11.0779 16.7661 LASELAKTPQKSVSF-p Q13416;T116-p LASELAKTPQKSVSF 0.17942090217629 0.000952253650599092 -0.231666666666667 -1.96966666666667 14.7283664392351 54.4257925599133 -0.231666666666667 -1.96966666666667 0.0336638169071609 3.60928140477034e-06 -2.82765962579113 -18.993248395468 Q13416 ORC2 Q13416.T116.p_ORC2 Q13416_T116t _1_1_116_116 Q13416 Q13416 Origin recognition complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15591.15591.4 14.72 14.72 7.249 2 1 1 0 489.0405 1873.1726 T116t TMT10 109 (K) LASELAKtPQK (S) LAS(0.0)ELAKT(0.99)PQK K:TMT10,t:Phosphorylated T ORC2 66027.4 2 1 1988.1 103.92 HUMAN 1 -14.7284 -54.4258 LASELKGSPVLLDPE-p O14686-3;S1151-p LASELKGSPVLLDPE 0.305159632119897 0.00765644293187018 -0.243333333333333 0.577666666666667 9.66027179890607 30.2118273256807 -0.243333333333333 0.577666666666667 0.108136627294151 0.000952395352422488 -1.92274369487364 6.48645514105857 O14686 KMT2D O14686.3.S1151.p_KMT2D O14686-3_S1151s _1_1_1151_1151 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34662.34662.4 22.79 21.17 7.443 3 1 1 0 802.9044 3128.63 S1151s TMT10 1150 (K) GsPVLLDPEELAPVTPMEVYPECK (Q) GS(0.99)PVLLDPEELAPVT(0.0)PMEVY(0.0)PECK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2D 600227.3 4 5 17.1 1042.08 HUMAN 1 -9.6603 30.2118 LASEPPGSPSTPRVS-p Q96HA7-2;S905-p LASEPPGSPSTPRVS 0.414602433785073 0.212575868838528 0.117666666666667 -0.122333333333333 7.05641799075223 8.8472425109523 0.117666666666667 -0.122333333333333 0.196951004845622 0.130399446780137 1.47088531485749 -1.78129126593394 Q96HA7 TONSL Q96HA7.2.S905.p_TONSL Q96HA7-2_S905s _1_1_905_905 Q96HA7-2 Q96HA7|Q96HA7-2 Isoform 2 of Tonsoku-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19150.19150.3 23.16 23.16 1.643 9 1 1 0 1118.1787 3272.5547 S905s TMT10 881 (R) LTCMQSCSAPVNAGPSSLASEPPGsPSTPR (V) LT(0.0)CMQS(0.0)CS(0.0)APVNAGPS(0.0)S(0.0)LAS(0.0)EPPGS(0.99)PS(0.0)T(0.0)PR C:Carbamidomethylation,s:Phosphorylated S TONSL 153116 8 4 2325.1 87.84 HUMAN 1 7.0564 -8.8472 LASKDVESPSWRSTT-p O00159-3;S389-p LASKDVESPSWRSTT 0.850370229459707 0.0263100552871134 -0.0373333333333333 0.291666666666667 1.36176496026982 21.471663924516 -0.0373333333333334 0.291666666666667 0.73084201103384 0.00712579965077757 -0.362313667388233 4.19784442278608 O00159 MYO1C O00159.3.S389.p_MYO1C O00159-3_S389s _1_1_389_389 O00159-3 O00159|O00159-3|F5H6E2|O00159-2 Isoform 3 of Unconventional myosin-Ic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14101.14101.2 14.42 10.84 2 4 1 1 0 1000.5167 1920.0591 S389s TMT10 381 (R) SLASKDVEsPSWR (S) S(0.0)LAS(0.0)KDVES(0.99)PS(0.0)WR K:TMT10,s:Phosphorylated S MYO1C 120424.7 8 4 296.4 379.15 HUMAN 1 -1.3618 21.4717 LASNGYESDEQEKSA-p Q96JG6;S546-p LASNGYESDEQEKSA 0.443773456134063 0.0372616918952394 -0.185666666666667 0.336333333333333 6.50341024214505 19.2028351489201 -0.185666666666667 0.336333333333333 0.223696390130161 0.0120147983188778 -1.37377597269788 3.70662687437397 Q96JG6 VPS50 Q96JG6.S546.p_VPS50 Q96JG6_S546s _1_1_546_546 Q96JG6 Q96JG6|Q96JG6-3 Syndetin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27174.27174.5 27.88 27.88 1.117 8 1 1 0 1115.9183 5495.5952 S546s TMT10 510 (K) TVTLFEQYCSGGNPFEIQANHKDEETEDVLASNGYEsDEQEK (S) T(0.0)VT(0.0)LFEQY(0.0)CS(0.0)GGNPFEIQANHKDEET(0.0)EDVLAS(0.0)NGY(0.0)ES(0.99)DEQEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VPS50 112027.8 9 3 1224.1 164.69 HUMAN 1 -6.5034 19.2028 LASPSEETLNEGEIL-p Q08AD1;T882-p LASPSEETLNEGEIL 0.98701560524362 0.0908089639720797 -0.00300000000000001 -0.243 0.115160256476077 13.7814561571103 -0.003 -0.243 0.973831849863993 0.0418653170287028 -0.0343469950351613 -2.65131999722163 Q08AD1 CAMSAP2 Q08AD1.T882.p_CAMSAP2 Q08AD1_T882t _1_1_882_882 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30304.30304.3 12.72 12.72 1.322 5 1 1 0 1030.5032 3009.5457 T882t TMT10 872 (K) QWNLASPSEEtLNEGEILEYTK (S) QWNLAS(0.0)PS(0.0)EET(0.99)LNEGEILEY(0.0)T(0.0)K K:TMT10,t:Phosphorylated T CAMSAP2 169284 1 15 28.2 931.95 HUMAN 1 -0.1152 -13.7815 LASQLQDSLKDLKAR-p P18206-2;S579-p LASQLQDSLKDLKAR 0.185461409283341 0.47722632832337 -0.254666666666667 0.067 14.3784861843863 4.28454488430423 -0.254666666666667 0.067 0.0364881110978778 0.372859756458569 -2.7626780100041 0.97097148117096 P18206 VCL P18206.2.S579.p_VCL P18206-2_S579s _1_1_579_579 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21570.21570.3 17.17 13.66 3.476 2 1 1 0 766.4426 2217.3421 S579s TMT10 571 (R) ALASQLQDsLKDLK (A) ALAS(0.0)QLQDS(0.99)LKDLK K:TMT10,s:Phosphorylated S VCL 117290.9 5 11 319.1 365.38 HUMAN 1 -14.3785 4.2845 LASRHLLSPVGRRQV-p Q9NXE4-4;S799-p LASRHLLSPVGRRQV 0.864448097634814 0.0273588124414629 0.028 -0.351666666666667 1.23447794665298 21.1990346689406 0.028 -0.351666666666667 0.752579190192892 0.00758746207124345 0.331702914280088 -4.13696197362705 Q9NXE4 SMPD4 Q9NXE4.4.S799.p_SMPD4 Q9NXE4-4_S799s _1_1_799_799 Q9NXE4-4 Q9NXE4-4|B1PBA3|H7BXF4|Q9NXE4-2|Q9NXE4-6|Q9NXE4-3|Q9NXE4-8|Q9NXE4-7|Q9NXE4-10|Q9NXE4-9|Q9NXE4-5 Isoform 4 of Sphingomyelin phosphodiesterase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8470.8470.3 11.9 8.38 99 1 1 1 0 448.5885 1263.7847 S799s TMT10 796 (R) HLLsPVGRR (Q) HLLS(1.0)PVGRR s:Phosphorylated S SMPD4 98945.3 5 6 1752.1 117.58 HUMAN 1 1.2345 -21.199 LASRMENSPQFPIDG-p Q6P4Q7;S728-p LASRMENSPQFPIDG 0.212087105290786 0.711505966371827 -0.264 -0.0546666666666666 13.0015675650145 2.03308385892676 -0.264 -0.0546666666666667 0.0501006365153042 0.626169073655376 -2.51134939330862 -0.516056013037404 Q6P4Q7 CNNM4 Q6P4Q7.S728.p_CNNM4 Q6P4Q7_S728s _1_1_728_728 Q6P4Q7 Q6P4Q7 Metal transporter CNNM4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21599.21599.3 23.27 23.27 6.273 3 1 1 0 1029.8081 3007.4364 S728s TMT10 725 (R) MENsPQFPIDGCTTHMENLAEK (S) MENS(0.99)PQFPIDGCT(0.0)T(0.0)HMENLAEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CNNM4 87175.9 5 6 1521.1 134.29 HUMAN 1 -13.0016 -2.0331 LASSQGGSPAPSPAG-p Q68DK7;S66-p LASSQGGSPAPSPAG 0.0887698163036001 0.0489535260449866 0.389666666666667 0.286666666666667 22.3985975474903 17.5254124234855 0.389666666666667 0.286666666666667 0.00575625792220708 0.0176790432246635 4.41367844572442 3.36418352233317 Q68DK7 MSL1 Q68DK7.S66.p_MSL1 Q68DK7_S66s _1_1_66_66 Q68DK7 Q68DK7|J3KSZ8|J3QQY0 Male-specific lethal 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16172.16172.3 21.49 21.49 2.329 4 1 1 0 1057.8875 3091.6813 S66s TMT10 52 (K) LKEPGPPLASSQGGsPAPSPAGCGGK (G) LKEPGPPLAS(0.0)S(0.0)QGGS(0.99)PAPS(0.0)PAGCGGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MSL1 67811.9 1 3 324.1 362.01 HUMAN 1 22.3986 17.5254 LASTSRDSPGAVAAP-p Q5THJ4;S2692-p LASTSRDSPGAVAAP 0.597678517169112 0.130209056562649 -0.189333333333333 0.285333333333333 4.13027880853349 11.6682833317622 -0.189333333333333 0.285333333333333 0.386342173848631 0.068103850467326 -0.941952013599273 2.27253450639229 Q5THJ4 VPS13D Q5THJ4.S2692.p_VPS13D Q5THJ4_S2692s _1_1_2692_2692 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28339.28339.4 23.63 21.68 1.39 7 1 1 0 766.9218 2984.7032 S2692s TMT10 2682 (K) SLSLASTSRDsPGAVAAPLISGVEIK (A) S(0.0)LS(0.0)LAS(0.0)T(0.0)S(0.0)RDS(0.99)PGAVAAPLIS(0.0)GVEIK K:TMT10,s:Phosphorylated S VPS13D 495672.3 4 20 124.1 545.31 HUMAN 1 -4.1303 11.6683 LATGAGLSESEAEPD-p A0A0B4J1V8;S238-p LATGAGLSESEAEPD 0.195880649499579 0.437391084328058 0.2 0.0733333333333334 13.8075696876622 4.78436355615966 0.2 0.0733333333333334 0.0416143419245418 0.332325482815654 2.6576554799593 1.06418199076888 A0A0B4J1V8 PPAN-P2RY11 A0A0B4J1V8.S238.p_PPAN-P2RY11 A0A0B4J1V8_S238sS240s_2_2_238_240 A0A0B4J1V8 A0A0B4J1V8|Q9NQ55|Q9NQ55-2|A8MV53|Q9NQ55-3 HCG2039996 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35356.35758.3 28.54 28.54 1.583 5 2 2 0 1398.3226 4033.0199 S238s S240s TMT10 224 (R) LQDISELLATGAGLsEsEAEPDGDHNITELPQAVAGR (G) LQDIS(0.0)ELLAT(0.0)GAGLS(0.99)ES(0.99)EAEPDGDHNIT(0.0)ELPQAVAGR s:Phosphorylated S PPAN-P2RY11 89000.3 15 4 3312.1 54.23 HUMAN 1 13.8076 4.7844 LATGELGTLTNVYKA-p Q9Y315;T198-p LATGELGTLTNVYKA 0.951276296080425 0.0111897847870031 -0.0123333333333333 0.570666666666667 0.429133465963184 27.325768305951 -0.0123333333333333 0.570666666666667 0.905913336888174 0.00185107139407954 -0.123838339965203 5.65005925569093 Q9Y315 DERA Q9Y315.T198.p_DERA Q9Y315_T198t _1_1_198_198 Q9Y315 Q9Y315|G3V158 Deoxyribose-phosphate aldolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28625.28625.3 14.61 12.2 1.938 5 1 1 0 744.7493 2152.2629 T198t TMT10 189 (K) TILATGELGtLTNVYK (A) T(0.0)ILAT(0.0)GELGT(0.99)LT(0.0)NVY(0.0)K K:TMT10,t:Phosphorylated T DERA 35515.4 1 2 3029.1 62.74 HUMAN 1 -0.4291 27.3258 LATIADASPTSTSKA-p Q9UHA2;S68-p LATIADASPTSTSKA 0.801789763948685 0.600745807628188 -0.038 0.06 1.84686837072205 2.99995558325546 -0.038 0.0600000000000001 0.653601684670331 0.501192359462411 -0.47461639780861 0.7203021810153 Q9UHA2 SS18L2 Q9UHA2.S68.p_SS18L2 Q9UHA2_S68s _1_1_68_68 Q9UHA2 Q9UHA2 SS18-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30096.30096.3 20.67 19.69 2.445 7 1 1 0 802.0952 2324.3113 S68s TMT10 57 (R) NLIYLATIADAsPTSTSK (A) NLIY(0.0)LAT(0.0)IADAS(0.99)PT(0.0)S(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SS18L2 8949 2 1 5315.1 20.67 HUMAN 1 -1.8469 3 LATLVDQSPESLKRK-p Q76L83;S562-p LATLVDQSPESLKRK 0.220304594594813 0.391339571569681 -0.261 -0.0853333333333333 12.6491008627973 5.4173259393279 -0.261 -0.0853333333333333 0.0543362814420685 0.287254873833536 -2.44802483683647 -1.17975964098712 Q76L83 ASXL2 Q76L83.S562.p_ASXL2 Q76L83_S562s _1_1_562_562 Q76L83 Q76L83|E7EWD6|Q76L83-2 Putative Polycomb group protein ASXL2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25930.25930.3 13.11 13.11 5.381 3 1 1 0 722.3876 2085.1844 S562s TMT10 553 (K) EPLATLVDQsPESLK (R) EPLAT(0.0)LVDQS(0.99)PES(0.0)LK K:TMT10,s:Phosphorylated S ASXL2 155129.4 2 8 293.1 380.51 HUMAN 1 -12.6491 -5.4173 LATMEPDSRPELQEK-p J3KN16;S1998-p LATMEPDSRPELQEK 0.450633345488445 0.597907736377167 -0.123 -0.0646666666666666 6.39110438247954 3.02420575293742 -0.123 -0.0646666666666666 0.22955648267542 0.49840159638914 -1.35394913073071 -0.725222225488985 J3KN16 KIAA0368 J3KN16.S1998.p_KIAA0368 J3KN16_S1998s _1_1_1998_1998 J3KN16 J3KN16|Q5VYK3 KIAA0368 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32294.32294.4 16.7 16.7 1.6 3 1 1 0 734.8915 2856.5793 S1998s TMT10 1985 (R) VLLIESLATMEPDsRPELQEK (A) VLLIES(0.0)LAT(0.0)MEPDS(0.99)RPELQEK K:TMT10,s:Phosphorylated S KIAA0368 225629.8 1 2 4414.1 31.76 HUMAN 1 -6.3911 -3.0242 LATMESLSDTESLYS-p Q9Y4D2;S784-p LATMESLSDTESLYS 0.609232852865696 0.0467334185813735 0.069 -0.398 3.98505504566739 17.7970113273588 0.069 -0.398 0.399479497980095 0.0166072937394959 0.914271796119569 -3.41854124458761 Q9Y4D2 DAGLA Q9Y4D2.S784.p_DAGLA Q9Y4D2_S784s _1_1_784_784 Q9Y4D2 Q9Y4D2 Sn1-specific diacylglycerol lipase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21795.21795.4 11.43 11.43 1.287 8 1 1 0 736.1053 2861.4301 S784s TMT10 774 (R) RAPLATMESLsDTESLYSFDSRR (S) RAPLAT(0.0)MES(0.0)LS(0.99)DT(0.0)ES(0.0)LY(0.0)S(0.0)FDS(0.0)RR s:Phosphorylated S DAGLA 116490.4 1 5 1490.1 137.27 HUMAN 1 3.9851 -17.797 LATSESKSMPVLGSV-p A0MZ66-3;S506-p LATSESKSMPVLGSV 0.299716212611529 0.424536659897373 -0.209 -0.0823333333333333 9.83695437182774 4.95261911260295 -0.209 -0.0823333333333333 0.103825627080184 0.319696652413457 -1.95339729581562 -1.09514853550095 A0MZ66 SHTN1 A0MZ66.3.S506.p_SHTN1 A0MZ66-3_S506s _1_1_506_506 A0MZ66-3 A0MZ66-3|A0MZ66-6|A0MZ66-5|A0MZ66-4|A0MZ66-8|A0MZ66-7 Isoform 3 of Shootin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23862.24066.3 18.41 18.41 9.657 5 1 1 0 610.6666 1750.0185 S506s TMT10 506 (K) sMPVLGSVSSVTK (T) S(0.99)MPVLGS(0.0)VS(0.0)S(0.0)VT(0.0)K K:TMT10,s:Phosphorylated S SHTN1 74064.4 14 7 838.1 214.92 HUMAN 1 -9.837 -4.9526 LATSRKHSLDLPHSE-p Q6P0Q8;S1429-p LATSRKHSLDLPHSE 0.140760843773736 0.0595568291375996 -0.447333333333333 -0.59 17.4198699656556 16.3222674940612 -0.447333333333333 -0.59 0.0181139432769683 0.0233224005894664 -3.34579483715907 -3.12805047843842 Q6P0Q8 MAST2 Q6P0Q8.S1429.p_MAST2 Q6P0Q8_S1429s _1_1_1429_1429 Q6P0Q8 Q6P0Q8|Q6P0Q8-2 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11426.11426.5 16.51 16.51 6.785 2 1 1 0 506.5013 2448.5108 S1429s TMT10 1427 (R) KHsLDLPHSELKK (E) KHS(0.99)LDLPHS(0.0)ELKK K:TMT10,s:Phosphorylated S MAST2 197687.5 1 63 121.1 549.41 HUMAN 1 -17.4199 -16.3223 LAVDGLVSPSNNSKE-p P18848;S69-p LAVDGLVSPSNNSKE 0.498541224247654 0.25573096351907 -0.122666666666667 -0.148666666666667 5.56892471570232 7.79911310332121 -0.122666666666667 -0.148666666666667 0.27740068453061 0.165992585542758 -1.20737065473354 -1.59979792556122 P18848 ATF4 P18848.S69.p_ATF4 P18848_S69s _1_1_69_69 P18848 P18848 Cyclic AMP-dependent transcription factor ATF-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.33868.33868.4 17.75 20.43 1.952 7 1 1 0 1074.5337 4215.1159 S69s TMT10 56 (K) AGSSEWLAVDGLVsPSNNSKEDAFSGTDWMLEK (M) AGS(0.0)S(0.0)EWLAVDGLVS(0.99)PS(0.0)NNS(0.0)KEDAFS(0.0)GT(0.0)DWMLEK K:TMT10,s:Phosphorylated S ATF4 38874.1 1 1 4152.1 36.57 HUMAN 1 -5.5689 -7.7991 LAVKDMGSCEIYPQT-p P35606;S350-p LAVKDMGSCEIYPQT 0.86718333213857 0.362634117704378 0.0286666666666667 0.116 1.20567048540263 5.84241869730872 0.0286666666666667 0.116 0.757587763673302 0.260470252036889 0.324701750498118 1.25614894493973 P35606 COPB2 P35606.S350.p_COPB2 P35606_S350s _1_1_350_350 P35606 P35606|P35606-2 Coatomer subunit beta' HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13145.13145.3 13.67 13.67 4.478 3 1 1 0 842.7093 2446.1441 S350s TMT10 347 (K) DMGsCEIYPQTIQHNPNGR (F) DMGS(0.99)CEIY(0.0)PQT(0.0)IQHNPNGR C:Carbamidomethylation,s:Phosphorylated S COPB2 103341.1 1 1 2300.1 89.13 HUMAN 1 1.2057 5.8424 LAVPAALTPRASPGH-p Q8TEM1;T1844-p LAVPAALTPRASPGH 0.14666043453421 0.57996969532645 0.340333333333333 0.145 16.9692581133164 3.19183983926933 0.340333333333333 0.145 0.0200943604665445 0.479530258050076 3.25658237258235 0.759004417888604 Q8TEM1 NUP210 Q8TEM1.T1844.p_NUP210 Q8TEM1_T1844t _1_1_1844_1844 Q8TEM1 Q8TEM1 Nuclear pore membrane glycoprotein 210 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19865.19865.3 15.2 13.7 99 1 1 1 0 478.2638 1352.8099 T1844t TMT10 1836 (R) DLAVPAALtPR (A) DLAVPAALT(1.0)PR t:Phosphorylated T NUP210 206020.3 2 1 4157.1 36.52 HUMAN 1 16.9693 3.1918 LAVPGALSPLAIPNA-p Q9UKA9-2;S308-p LAVPGALSPLAIPNA 0.822487518557004 0.311816609365381 0.0413333333333333 0.126 1.63264726021166 6.68878990842295 0.0413333333333333 0.126 0.686649762184137 0.214348776623969 0.425819635673555 1.40604854317532 Q9UKA9 PTBP2 Q9UKA9.2.S308.p_PTBP2 Q9UKA9-2_S308s _1_1_308_308 Q9UKA9-2 Q9UKA9-2|Q9UKA9-5 Isoform 2 of Polypyrimidine tract-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36777.36777.4 26.47 26.47 11.896 3 1 1 0 749.6591 2915.6516 S308s TMT10 297 (K) ETSLLAVPGALsPLAIPNAAAAAAAAAAGR (V) ET(0.0)S(0.0)LLAVPGALS(0.99)PLAIPNAAAAAAAAAAGR s:Phosphorylated S PTBP2 57760 5 1 3032.2 62.69 HUMAN 1 1.6326 6.6888 LAVRRACYGVLRFIM-p P23396-2;Y136-p LAVRRACYGVLRFIM 0.6705604621194 0.961653000540495 0.0586666666666667 -0.00766666666666665 3.25025578154522 0.243951447497741 0.0586666666666667 -0.00766666666666666 0.473123393123584 0.94537661485662 0.770799455670493 -0.071745484097466 P23396 RPS3 P23396.2.Y136.p_RPS3 P23396-2_Y136y _1_1_136_136 P23396-2 P23396-2|E9PL09|P39023|G5E9G0 Isoform 2 of 40S ribosomal protein S3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11723.11808.2 11.96 3.87 99 1 1 1 0 574.2807 1067.5869 Y136y TMT10 134 (R) ACyGVLR (F) ACY(1.0)GVLR C:Carbamidomethylation,y:Phosphorylated Y RPS3 28657.3 4 1 143.1 23.05 HUMAN 1 3.2503 -0.244 LAVYAEDSEPESDGE-p Q9UHR5;S18-p LAVYAEDSEPESDGE 0.261391966603166 0.0716885574138465 0.162666666666667 0.203333333333333 11.042392616418 15.2126855471855 0.162666666666667 0.203333333333333 0.0786612309618049 0.0301114344731528 2.16353783789157 2.91650019525035 Q9UHR5 SAP30BP Q9UHR5.S18.p_SAP30BP Q9UHR5_S18sS22s_2_2_18_22 Q9UHR5 Q9UHR5|Q9UHR5-2|X6R3T8|J3KRU5|F5H478 SAP30-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.33144.33770.4 28.05 28.05 6.645 6 2 2 0 986.2031 3781.8544 S18s S22s TMT10 6 (K) NVLSSLAVYAEDsEPEsDGEAGIEAVGSAAEEK (G) NVLS(0.0)S(0.0)LAVY(0.0)AEDS(0.99)EPES(0.99)DGEAGIEAVGS(0.0)AAEEK K:TMT10,s:Phosphorylated S SAP30BP 33983.9 22 5 1421.1 144.21 HUMAN 1 11.0424 15.2127 LCAGIMITASHNPKQ-p Q96G03;T163-p LCAGIMITASHNPKQ 0.472880610997274 0.293628633431774 0.106333333333333 -0.101333333333333 5.99303707743939 7.02462507667531 0.106333333333333 -0.101333333333333 0.251591689922235 0.198398092510006 1.28332308956935 -1.46491686621655 Q96G03 PGM2 Q96G03.T163.p_PGM2 Q96G03_T163tS165s_2_2_163_165 Q96G03 Q96G03|Q96G03-2 Phosphoglucomutase-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20608.20608.4 11.21 11.21 11.211 3 2 2 0 767.1326 2905.5631 T163t S165s TMT10 156 (K) LCAGIMItAsHNPKQDNGYK (V) LCAGIMIT(0.99)AS(0.99)HNPKQDNGY(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S PGM2 68795.6 1 4 3190.1 58.14 HUMAN 1 5.993 -7.0246 LCAKHFETSMICRTS-p O43422;T64-p LCAKHFETSMICRTS 0.735321298360423 0.994666066452858 0.0493333333333333 -0.00133333333333333 2.52799834813577 0.032635521250569 0.0493333333333333 -0.00133333333333332 0.558727651509279 0.992513557590419 0.622797429834189 -0.00982332985093782 O43422 PRKRIR O43422.T64.p_PRKRIR O43422_T64t _1_1_64_64 O43422 O43422 52 kDa repressor of the inhibitor of the protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11515.11515.4 8.89 8.89 1.165 5 1 1 0 524.2435 2013.9836 T64t TMT10 61 (K) HFEtSMICRTSPYR (T) HFET(0.99)S(0.0)MICRT(0.0)S(0.0)PY(0.0)R C:Carbamidomethylation,t:Phosphorylated T THAP12 88843.5 1 1 3205.1 57.57 HUMAN 1 2.528 -0.0326 LCDFGSASHVADNDI-p Q13523;S839-p LCDFGSASHVADNDI 0.503218271386668 0.180907792771053 0.127 0.160666666666667 5.50246359246376 9.76530408884476 0.127 0.160666666666667 0.281678461992073 0.105552759359531 1.19539242954605 1.94019915420702 Q13523 PRPF4B Q13523.S839.p_PRPF4B Q13523_S839sY849y_2_2_839_849 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25594.25594.3 17.7 17.7 1.659 5 2 2 0 942.7537 2666.3082 S839s Y849y TMT10 832 (K) LCDFGSAsHVADNDITPyLVSR (F) LCDFGS(0.0)AS(0.99)HVADNDIT(0.0)PY(0.99)LVS(0.0)R C:Carbamidomethylation,s:Phosphorylated S,y:Phosphorylated Y PRPF4B 117327.1 1 43 70.1 666.55 HUMAN 1 5.5025 9.7653 LCDPDGLSDEEDQKP-p Q96RY5;S307-p LCDPDGLSDEEDQKP 0.664425582516381 0.0670223426942559 -0.091 0.222666666666667 3.3202951998688 15.6125626191559 -0.091 0.222666666666667 0.465554447649371 0.0274627319558718 -0.784749789730138 2.99209573836437 Q96RY5 CRAMP1 Q96RY5.S307.p_CRAMP1 Q96RY5_S307s _1_1_307_307 Q96RY5 Q96RY5 Protein cramped-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26781.26781.5 20.06 20.06 99 1 1 1 0 825.6488 4044.2407 S307s TMT10 300 (K) LCDPDGLsDEEDQKPVRLPLKVPIELQPR (N) LCDPDGLS(1.0)DEEDQKPVRLPLKVPIELQPR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CRAMP1 135914.1 8 2 647.1 254.68 HUMAN 1 -3.3203 15.6126 LCFPENETPPEGKNM-p Q13535;T1989-p LCFPENETPPEGKNM 0.541053998664189 0.20090220225381 -0.082 0.149666666666667 4.92142387424082 9.16928552204123 -0.082 0.149666666666667 0.322001290747488 0.121079731103751 -1.08963874678331 1.83699661108764 Q13535 ATR Q13535.T1989.p_ATR Q13535_T1989t _1_1_1989_1989 Q13535 Q13535|Q13535-3|Q13535-2 Serine/threonine-protein kinase ATR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22460.22460.3 18.72 18.72 99 1 1 1 0 781.0457 2261.1524 T1989t TMT10 1979 (K) GVELCFPENEtPPEGK (N) GVELCFPENET(1.0)PPEGK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ATR 304955.6 5 4 3206.1 57.57 HUMAN 1 -4.9214 9.1693 LCGEEENSVHILDEK-p Q8NB91;S456-p LCGEEENSVHILDEK 0.306452172412958 0.134495049576889 -0.256333333333333 0.157 9.61649140888445 11.4836248431937 -0.256333333333333 0.157 0.109232244877222 0.0710620146251689 -1.91515191543401 2.24000274206562 Q8NB91 FANCB Q8NB91.S456.p_FANCB Q8NB91_S456s _1_1_456_456 Q8NB91 Q8NB91 Fanconi anemia group B protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24247.24247.3 19.17 14.17 99 1 1 1 0 970.1337 2828.4211 S456s TMT10 444 (K) ECLVPLCGEEENsVHILDEK (L) ECLVPLCGEEENS(1.0)VHILDEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FANCB 99493.2 2 1 5453.1 19.17 HUMAN 1 -9.6165 11.4836 LCHRRLHSGEKPYKC-p Q8N4W9;S506-p LCHRRLHSGEKPYKC 0.109756699463187 0.00232621067136905 -0.343333333333333 -0.791 20.0852683216871 40.5456827674419 -0.343333333333333 -0.791 0.0098055773030735 8.81925141128304e-05 -3.89727380786783 -10.3795496800464 Q8N4W9 ZNF808 Q8N4W9.S506.p_ZNF808 Q8N4W9_S506s _1_1_506_506 Q8N4W9 O14709|Q8N4W9|Q9P2J8|Q8N4W9-2|Q9HCG1|M0QZI7|Q08AN1|Q9P2J8-2|Q6ZNG1|P41182|Q8N823|Q86V71|P41182-2|Q7Z3I0|Q8IYB9|Q8N823-2|O43296|Q5CZA5|A0A075B7G4|Q08ER8|Q8IYI8|Q96N58|A0A087WV98|Q6PDB4|A6NK75|Q494X3|A0A087WSV7|Q8TBZ5|Q9P255|Q5VIY5|Q9Y2G7|Q9BS31|Q9BUG6|A0A0C4DGQ1|Q5CZA5-2|Q03924|Q8N143|M0QX90|Q5VIY5-2|A0A075B7G3|Q9NSJ1|Q9BUG6-2|K7EMC4|Q86XN6|Q86XN6-2|Q86XN6-3|P17035-2|Q6ZN06|A6NNF4-3|Q7L2R6 Zinc finger protein 808 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8326.8326.4 12.6 12.6 10.72 2 1 1 0 457.2606 1746.0517 S506s TMT10 504 (R) LHsGEKPYK (C) LHS(0.99)GEKPY(0.0)K K:TMT10,s:Phosphorylated S ZNF808 108246.1 2 96 240.98 415.72 HUMAN 1 -20.0853 -40.5457 LCIERRLSALLTGIC-p O75385;S1042-p LCIERRLSALLTGIC 0.44321391319195 0.016086511519046 -0.113333333333333 0.354 6.51377892836579 24.7756804219563 -0.113333333333333 0.354 0.223162956901513 0.00332990587605538 -1.37560450228081 4.98104258053448 O75385 ULK1 O75385.S1042.p_ULK1 O75385_S1042s _1_1_1042_1042 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30015.30015.2 8.97 8.97 3.405 2 1 1 0 742.3988 1403.8242 S1042s TMT10 1040 (R) RLsALLTGICA (-) RLS(0.99)ALLT(0.0)GICA C:Carbamidomethylation,s:Phosphorylated S ULK1 113656.3 1 21 351.1 351.01 HUMAN 1 -6.5138 24.7757 LCIPAADSPSQNLTR-p Q9NRW4-2;S58-p LCIPAADSPSQNLTR 0.43809415926049 0.747277227509704 0.128333333333333 -0.0333333333333333 6.59896465436107 1.74674114521328 0.128333333333333 -0.0333333333333333 0.218828324224489 0.668845617048201 1.39061484100016 -0.451905643101093 Q9NRW4 DUSP22 Q9NRW4.2.S58.p_DUSP22 Q9NRW4-2_S58s _1_1_58_58 Q9NRW4-2 Q9NRW4-2 Isoform 2 of Dual specificity protein phosphatase 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21865.21865.3 20.12 20.12 3.548 4 1 1 0 705.6759 2035.048 S58s TMT10 50 (K) YLCIPAADsPSQNLTR (H) Y(0.0)LCIPAADS(0.99)PS(0.0)QNLT(0.0)R C:Carbamidomethylation,s:Phosphorylated S DUSP22 23553.2 2 1 4682.1 28.06 HUMAN 1 6.599 -1.7467 LCLDMEASPNHLQTK-p A0A087WVW6;S628-p LCLDMEASPNHLQTK 0.929912327736474 0.86376655847518 0.0136666666666667 0.0246666666666667 0.625654568207482 0.897507236158534 0.0136666666666667 0.0246666666666667 0.865833815139454 0.813297198614214 0.177148544813174 0.247943745015676 A0A087WVW6 RAPGEFL1 A0A087WVW6.S628.p_RAPGEFL1 A0A087WVW6_S628s _1_1_628_628 A0A087WVW6 Q9UHV5|A0A087WVW6|Q9UHV5-3|F5H2D5|Q9UHV5-2 Rap guanine nucleotide exchange factor-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15474.15474.4 10.2 10.2 6.299 3 1 1 0 659.5838 2555.3474 S628s TMT10 618 (R) SRPLCLDMEAsPNHLQTK (A) S(0.0)RPLCLDMEAS(0.99)PNHLQT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RAPGEFL1 74035.2 1 3 3882.1 41.41 HUMAN 1 0.6257 0.8975 LCLEKSHSPIQDVPK-p Q9BWF2;S347-p LCLEKSHSPIQDVPK 0.288950777315235 0.00104745705872082 -0.155333333333333 -1.45533333333333 10.1671323131741 50.9950759145099 -0.155333333333333 -1.45533333333333 0.0962247449589641 7.95229364832913e-06 -2.01076259526869 -16.382139869755 Q9BWF2 TRAIP Q9BWF2.S347.p_TRAIP Q9BWF2_S347s _1_1_347_347 Q9BWF2 Q9BWF2|E7ETV1 E3 ubiquitin-protein ligase TRAIP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8841.8841.4 12.73 12.73 2.208 2 1 1 0 501.5385 1923.1631 S347s TMT10 345 (K) SHsPIQDVPKK (I) S(0.0)HS(0.99)PIQDVPKK K:TMT10,s:Phosphorylated S TRAIP 53978 1 1 6265.1 12.73 HUMAN 1 -10.1671 -50.9951 LCLFRPQSGRVLSAM-p O43598;S123-p LCLFRPQSGRVLSAM 0.0608497647854506 0.888139576657369 0.828 -0.026 26.5763501495948 0.723810638621745 0.828 -0.026 0.00219970775062995 0.846484355762082 5.45441952434948 -0.203068928494066 O43598 DNPH1 O43598.S123.p_DNPH1 O43598_S123s _1_1_123_123 O43598 O43598|O43598-2 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15195.15195.3 11.96 9.12 99 1 1 1 0 476.2387 1346.7362 S123s Hydrogen 115 (R) ILCLFRPQsGR (V) ILCLFRPQS(1.0)GR C:Carbamidomethylation,s:Phosphorylated S DNPH1 19222.2 4 3 2326.1 87.8 HUMAN 1 26.5764 -0.7238 LCLKKTVSLCDITIT-p P30307;S263-p LCLKKTVSLCDITIT 0.117095640514477 0.621867543902399 0.283666666666667 0.0493333333333333 19.3899233731584 2.8052279561616 0.283666666666667 0.0493333333333334 0.0115082069382529 0.524176086888499 3.74922735751909 0.68047441910101 P30307 CDC25C P30307.S263.p_CDC25C P30307_S263s _1_1_263_263 P30307 P30307|P30307-2|P30307-3|P30307-4 M-phase inducer phosphatase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.34304.34304.3 22.56 18.95 2.225 6 1 1 0 1230.5995 3609.8181 S263s TMT10 261 (K) TVsLCDITITQMLEEDSNQGHLIGDFSK (V) T(0.0)VS(0.99)LCDIT(0.0)IT(0.0)QMLEEDS(0.0)NQGHLIGDFS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CDC25C 54219.5 17 5 1847.1 111.23 HUMAN 1 19.3899 2.8052 LCLQDGGSPPGPGDL-p Q96FS4;S817-p LCLQDGGSPPGPGDL 0.334837228172211 0.838503714071162 0.163666666666667 -0.046 8.86806373883548 1.07564722707262 0.163666666666667 -0.046 0.12977577351224 0.780612097206371 1.78552428330263 -0.292718426356951 Q96FS4 SIPA1 Q96FS4.S817.p_SIPA1 Q96FS4_S817s _1_1_817_817 Q96FS4 Q96FS4|F6RY50 Signal-induced proliferation-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23552.23552.3 15.47 15.47 99 1 1 1 0 923.4461 2688.3613 S817s TMT10 806 (K) QLLHLCLQDGGsPPGPGDLAEER (T) QLLHLCLQDGGS(1.0)PPGPGDLAEER C:Carbamidomethylation,s:Phosphorylated S SIPA1 112888.8 1 1 2188.1 94.04 HUMAN 1 8.8681 -1.0756 LCNLEEGSPGSGTYT-p Q9Y3B2;S21-p LCNLEEGSPGSGTYT 0.2592179584854 0.0278539336434791 -0.168 -0.402666666666667 11.1391129285776 21.0744708228615 -0.168 -0.402666666666667 0.0769287555641745 0.0078082357577292 -2.18049884989363 -4.10932068346494 Q9Y3B2 EXOSC1 Q9Y3B2.S21.p_EXOSC1 Q9Y3B2_S21s _1_1_21_21 Q9Y3B2 Q9Y3B2|B1AMU4|B1AMU3|R4GNH9 Exosome complex component CSL4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14919.14919.3 14.39 14.39 4.034 5 1 1 0 683.976 1969.9487 S21s TMT10 14 (R) LCNLEEGsPGSGTYTR (H) LCNLEEGS(0.99)PGS(0.0)GT(0.0)Y(0.0)T(0.0)R C:Carbamidomethylation,s:Phosphorylated S EXOSC1 21793.7 3 1 3675.1 45.53 HUMAN 1 -11.1391 -21.0745 LCNRPVGSDQKAVIH-p A0JNW5;S1241-p LCNRPVGSDQKAVIH 0.103158959778694 0.210090226439382 0.350666666666667 -0.195666666666667 20.8172565211224 8.91426324384847 0.347387376931509 -0.195666666666667 0.00828465347756655 0.12840255797115 4.0565792120467 -1.79288315334754 A0JNW5 UHRF1BP1L A0JNW5.S1241.p_UHRF1BP1L A0JNW5_S1241s _1_1_1241_1241 A0JNW5 A0JNW5|A0A0C4DGH6 UHRF1-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7025.7025.4 8.08 8.08 8.082 2 1 1 0 528.7672 2032.0799 S1241s TMT10 1232 (R) HYLCNRPVGsDQK (A) HY(0.0)LCNRPVGS(0.99)DQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UHRF1BP1L 165621.9 1 15 398.1 328.88 HUMAN 1 20.8173 -8.9143 LCPSEGESDAEAESK-p O15119;S375-p LCPSEGESDAEAESK 0.296077692655468 0.888836384256751 0.155 -0.0146666666666667 9.95358576000643 0.719077411726429 0.155 -0.0146666666666667 0.101074458661179 0.847407412998373 1.97364782257168 -0.201828118552092 O15119 TBX3 O15119.S375.p_TBX3 O15119_S371sS375s_2_2_371_375 O15119 O15119|O15119-2 T-box transcription factor TBX3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13227.13227.4 14.46 14.46 4.019 3 2 2 0 967.1645 3705.7099 S371s S375s TMT10 367 (K) DLCPsEGEsDAEAESKEEHGPEACDAAK (I) DLCPS(0.99)EGES(0.99)DAEAES(0.0)KEEHGPEACDAAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TBX3 79786.8 1 9 1589.1 129.37 HUMAN 1 9.9536 -0.7191 LCQFFKISPDLNIKC-p Q69YH5;S756-p LCQFFKISPDLNIKC 0.49340271649839 0.0117635305289895 -0.131333333333333 -0.431 5.64881124775777 26.9688485204782 -0.131333333333333 -0.431 0.272344666875463 0.00200962556999883 -1.22173980594403 -5.55268669199738 Q69YH5 CDCA2 Q69YH5.S756.p_CDCA2 Q69YH5_S756s_1_1_756_756 Q69YH5 E9PEI0|Q69YH5 Cell division cycle-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31252.31252.5 25.39 25.39 2.174 5 1 1 0 1089.9755 5364.8708 N745n S756s TMT10 722 (R) VASDSPKPALTLQQGQEFSAGGQnAENLCQFFKIsPDLNIK (C) VAS(0.0)DS(0.0)PKPALT(0.0)LQQGQEFS(0.0)AGGQN(0.99)AEN(0.0)LCQFFKIS(0.99)PDLN(0.0)IK K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S CDCA2 114214.8 3 12 407.1 324.13 HUMAN 1 -5.6488 -26.9688 LCQLAAYSPRNIRVG-p Q32MQ0;S645-p LCQLAAYSPRNIRVG 0.693437376140839 0.450525122352267 0.0696666666666667 -0.075 2.98261091307952 4.61541591944683 0.0696666666666667 -0.075 0.50319800276798 0.345508239017634 0.716878161221419 -1.03288939372065 Q32MQ0 ZNF750 Q32MQ0.S645.p_ZNF750 Q32MQ0_S645s _1_1_645_645 Q32MQ0 Q32MQ0|I3L0W7 Zinc finger protein 750 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22931.22931.3 18.23 18.23 5.872 3 1 1 0 677.0113 1949.0476 S645s TMT10 632 (K) QTAAVALCQLAAYsPR (N) QT(0.0)AAVALCQLAAY(0.0)S(0.99)PR C:Carbamidomethylation,s:Phosphorylated S ZNF750 78215 1 4 2205.1 93.47 HUMAN 1 2.9826 -4.6154 LCRDLVHSNKKEQEF-p Q9Y2W1;S600-p LCRDLVHSNKKEQEF 0.403730147875063 0.00755417105514887 0.111333333333333 -0.515333333333333 7.27229159867305 30.3199139751759 0.111333333333333 -0.515333333333333 0.187400540926528 0.00092898478787985 1.50859726949706 -6.51957239588011 Q9Y2W1 THRAP3 Q9Y2W1.S600.p_THRAP3 Q9Y2W1_S600s _1_1_600_600 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6828.6828.4 9.93 9.93 99 1 1 1 0 427.7499 1628.0099 S600s TMT10 596 (R) DLVHsNKK (E) DLVHS(1.0)NKK K:TMT10,s:Phosphorylated S THRAP3 108720.9 2 77 10.2 1293.04 HUMAN 1 7.2723 -30.3199 LCRQLSESESSLEMD-p Q16204;S325-p LCRQLSESESSLEMD 0.714354134547226 0.685086262726147 -0.0526666666666667 -0.0536666666666666 2.75456189176933 2.24864932260208 -0.0526666666666667 -0.0536666666666667 0.530327088345458 0.595847426223053 -0.670104402616547 -0.563120805205952 Q16204 CCDC6 Q16204.S325.p_CCDC6 Q16204_S325s _1_1_325_325 Q16204 Q16204 Coiled-coil domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22469.22846.5 23.24 23.24 1.483 6 1 1 0 723.5286 3533.6474 S325s TMT10 321 (R) QLSEsESSLEMDDERYFNEMSAQGLRPR (T) Q(0.0)LS(0.0)ES(0.99)ES(0.0)S(0.0)LEM(0.0)DDERY(0.0)FN(0.0)EM(0.0)S(0.0)AQGLRPR s:Phosphorylated S CCDC6 53461.2 8 8 423.1 319.68 HUMAN 1 -2.7546 -2.2486 LCRRQEDSRVMVYSA-p Q96BI3;S251-p LCRRQEDSRVMVYSA 0.590678714690377 0.483028848260803 -0.105666666666667 0.0756666666666667 4.21466892487206 4.21750890446533 -0.105666666666667 0.0756666666666667 0.378907417845658 0.37865972011689 -0.957947725984442 0.958316058000644 Q96BI3 APH1A Q96BI3.S251.p_APH1A Q96BI3_S251s _1_1_251_251 Q96BI3 Q96BI3 Gamma-secretase subunit APH-1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10960.10960.3 10.49 6.86 9.498 3 1 1 0 673.6724 1939.0381 S251s TMT10 247 (R) RQEDsRVMVYSALR (I) RQEDS(0.99)RVMVY(0.0)S(0.0)ALR s:Phosphorylated S APH1A 29166.7 1 1 5143.1 22.46 HUMAN 1 -4.2147 4.2175 LCSSLNLSPARYVTV-p Q86TJ2;S365-p LCSSLNLSPARYVTV 0.77793262365502 0.67526106721046 -0.088 0.094 2.09542787472629 2.33086026145796 -0.0880000000000001 0.094 0.617244476858103 0.58467425892226 -0.529833027630833 0.580815984373824 Q86TJ2 TADA2B Q86TJ2.S365.p_TADA2B Q86TJ2_S365s _1_1_365_365 Q86TJ2 Q86TJ2|Q86TJ2-2|Q86TJ2-3 Transcriptional adapter 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20911.20911.3 9.63 9.63 3.42 3 1 1 0 542.6151 1545.862 S365s TMT10 357 (K) VLCSSLNLsPAR (Y) VLCS(0.0)S(0.0)LNLS(0.99)PAR C:Carbamidomethylation,s:Phosphorylated S TADA2B 49040 1 2 5471.1 19.04 HUMAN 1 -2.0954 2.3309 LCTFEEGSQMDNMLV-p Q8N680;S435-p LCTFEEGSQMDNMLV 0.0925729175758348 0.00215840414867258 0.641333333333333 1.24366666666667 22.0078820693382 41.4134688158039 0.641333333333333 1.24366666666667 0.00629813249985394 7.22192740244185e-05 4.32373195843445 10.7857565288774 Q8N680 ZBTB2 Q8N680.S435.p_ZBTB2 Q8N680_S435s _1_1_435_435 Q8N680 Q8N680 Zinc finger and BTB domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27950.27950.5 26 26 3.725 5 1 1 0 775.184 3791.9261 S435s TMT10 424 (K) QTLELCTFEEGsQMDNMLVQTNKPYK (C) Q(0.0)T(0.0)LELCT(0.0)FEEGS(0.99)QM(0.0)DN(0.0)M(0.0)LVQT(0.0)N(0.0)KPY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZBTB2 58248.7 3 3 2616.1 76.7 HUMAN 1 22.0079 41.4135 LDAITDISPKQSTHG-p Q9Y2L8;S335-p LDAITDISPKQSTHG 0.259910887946739 0.0203650084961474 -0.245666666666667 -0.45 11.0978051565171 23.1574773022373 -0.245666666666667 -0.45 0.0776639516621809 0.00483339479185687 -2.17325288465331 -4.58657145445551 Q9Y2L8 ZKSCAN5 Q9Y2L8.S335.p_ZKSCAN5 Q9Y2L8_S335s _1_1_335_335 Q9Y2L8 Q9Y2L8 Zinc finger protein with KRAB and SCAN domains 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22281.22281.3 14.45 13.23 3.334 2 1 1 0 575.9728 1645.9413 S335s TMT10 327 (R) DLDAITDIsPK (Q) DLDAIT(0.0)DIS(0.99)PK K:TMT10,s:Phosphorylated S ZKSCAN5 98955.3 1 15 2565.3 78.32 HUMAN 1 -11.0978 -23.1575 LDAKPVESPGDPNQL-p Q96QC0;S382-p LDAKPVESPGDPNQL 0.637478023238816 0.0415389477499685 0.132 0.511333333333333 3.6474835052989 18.5191776654617 0.132 0.511333333333333 0.431769190561665 0.0140631378376793 0.849115992476348 3.56508424418044 Q96QC0 PPP1R10 Q96QC0.S382.p_PPP1R10 Q96QC0_S382s _1_1_382_382 Q96QC0 Q96QC0 Serine/threonine-protein phosphatase 1 regulatory subunit 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11795.11795.3 9.03 1.93 8.397 2 1 1 0 692.7028 1996.1228 S382s TMT10 379 (K) PVEsPGDPNQLTRK (G) PVES(0.99)PGDPNQLT(0.0)RK K:TMT10,s:Phosphorylated S PPP1R10 99398.3 1 3 592.1 264.27 HUMAN 1 3.6475 18.5192 LDAKTSVSQNVIPSS-p Q03188;S170-p LDAKTSVSQNVIPSS 0.668315561863661 0.00588660631048189 0.0586666666666667 -0.640333333333333 3.27330987002325 32.2294723877864 0.0586666666666667 -0.640333333333333 0.47061851920018 0.00059848429882672 0.775398372412878 -7.1277714292954 Q03188 CENPC Q03188.S170.p_CENPC Q03188_S170s _1_1_170_170 Q03188 Q03188|Q03188-2 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14765.14765.3 10.8 10.8 1.106 5 1 1 0 662.0189 1904.0853 S170s TMT10 167 (K) TSVsQNVIPSSAQK (R) T(0.0)S(0.0)VS(0.99)QNVIPS(0.0)S(0.0)AQK K:TMT10,s:Phosphorylated S CENPC 107459.5 1 9 209.1 442.77 HUMAN 1 3.2733 -32.2295 LDASKIRSGYFDERY-p P12532-2;S182-p LDASKIRSGYFDERY 0.189469922667285 0.034397131814499 0.215 0.346666666666667 14.1394077834158 19.7205719398738 0.215 0.346666666666667 0.038553092619966 0.0106645566614515 2.71855006616887 3.81573004112134 P12532 CKMT1B P12532.2.S182.p_CKMT1B P12532-2_S182s _1_1_182_182 P12532-2 P12532-2|F8WCN3 Isoform 2 of Creatine kinase U-type, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10922.10922.2 11.4 3.65 3.502 2 1 1 0 726.3474 1371.7218 S182s TMT10 180 (K) IRsGYFDER (Y) IRS(0.99)GY(0.0)FDER s:Phosphorylated S CKMT1A 50933.3 2 1 1688.1 120.83 HUMAN 1 14.1394 19.7206 LDATDQESLELKPTS-p Q8IZA0;S978-p LDATDQESLELKPTS 0.306735184126758 0.0756496828135343 0.149333333333333 0.238333333333333 9.60335584998205 14.8816473124285 0.149333333333333 0.238333333333333 0.109563126043239 0.0324964012651921 1.9128744093033 2.85443872251651 Q8IZA0 KIAA0319L Q8IZA0.S978.p_KIAA0319L Q8IZA0_S978s _1_1_978_978 Q8IZA0 Q8IZA0|Q8IZA0-2|Q8IZA0-3|C9J519 Dyslexia-associated protein KIAA0319-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20673.20673.3 15.15 15.15 2.247 4 1 1 0 818.769 2374.323 S978s TMT10 970 (K) ILDATDQEsLELKPTSR (A) ILDAT(0.0)DQES(0.99)LELKPT(0.0)S(0.0)R K:TMT10,s:Phosphorylated S KIAA0319L 116739.6 2 1 5399.1 19.7 HUMAN 1 9.6034 14.8816 LDATQVPSPLPLAQP-p O95402;S314-p LDATQVPSPLPLAQP 0.35777632726539 0.380805785253641 0.126333333333333 0.0853333333333333 8.29791929402313 5.57018928642212 0.126333333333333 0.0868488616571512 0.147981719915861 0.277319923265781 1.68680613835711 1.20733011902034 O95402 MED26 O95402.S314.p_MED26 O95402_S314s _1_1_314_314 O95402 O95402|B8ZZF3 Mediator of RNA polymerase II transcription subunit 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22377.22377.3 17.93 17.93 4.378 7 1 1 0 1218.6493 3573.959 S314s TMT10 295 (K) GSVPSPSPRPQALDATQVPsPLPLAQPSTPPVR (R) GS(0.0)VPS(0.0)PS(0.0)PRPQALDAT(0.0)QVPS(0.99)PLPLAQPS(0.0)T(0.0)PPVR s:Phosphorylated S MED26 65901.7 3 2 901.1 203.59 HUMAN 1 8.2979 5.5702 LDAYMAQTDPETND_-p Q9Y3Y2-3;T243-p LDAYMAQTDPETND_ 0.145152146047681 0.197713261865413 0.352666666666667 -0.180666666666667 17.072167428002 9.26232181102847 0.352666666666667 -0.180666666666667 0.0196238066956106 0.118513498576225 3.27686233635605 -1.85309402125151 Q9Y3Y2 CHTOP Q9Y3Y2.3.T243.p_CHTOP Q9Y3Y2-3_T243t _1_1_243_243 Q9Y3Y2-3 Q9Y3Y2-3|X6R700|Q9Y3Y2-4 Isoform 2 of Chromatin target of PRMT1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18596.18596.4 16.66 13.53 1.683 4 1 1 0 744.0969 2893.3926 T243t TMT10 228 (K) TKGHLDAELDAYMAQtDPETND (-) T(0.0)KGHLDAELDAY(0.0)MAQT(0.99)DPET(0.0)ND K:TMT10,t:Phosphorylated T CHTOP 26524.3 2 2 4778.1 26.78 HUMAN 1 17.0722 -9.2623 LDCILPPTRPTDKPL-p Q5VTE0;T239-p LDCILPPTRPTDKPL 0.356889553098768 0.00967265628027221 0.244666666666667 0.436666666666667 8.31919561791435 28.38050793025 0.244666666666667 0.436666666666667 0.14725852232554 0.00145194179542377 1.69049215747907 5.94536661767054 Q5VTE0 NotFound Q5VTE0.T239.p_NotFound Q5VTE0_T239t _1_1_239_239 Q5VTE0 P68104|Q5VTE0|P68104-2|A0A087WVQ9|A0A087WV01 Putative elongation factor 1-alpha-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.34733.34733.5 12.91 12.91 1.202 6 1 1 0 949.9175 4665.5893 T239t TMT10 220 (K) DGNASGTTLLEALDCILPPtRPTDKPLRLPLQDVYK (I) DGNAS(0.0)GT(0.0)T(0.0)LLEALDCILPPT(0.99)RPT(0.0)DKPLRLPLQDVY(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T EEF1A1P5 50526.4 2 6 1898.1 108.38 HUMAN 1 8.3192 28.3805 LDDSDFETEDFDVRS-p P35221;T645-p LDDSDFETEDFDVRS 0.619088825137392 0.0410191468580623 0.0706666666666667 0.257 3.86957509465415 18.589424746127 0.0706666666666666 0.257 0.410244238528336 0.0138374965429878 0.892115237330054 3.57949924438173 P35221 CTNNA1 P35221.T645.p_CTNNA1 P35221_S641sT645t_2_2_641_645 P35221 P35221-2|G3XAM7|P35221-3 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24039.24651.3 19.01 19.01 9.019 3 2 2 0 850.0016 2388.0564 S641s T645t TMT10 634 (R) TPEELDDsDFEtEDFDVR (S) T(0.0)PEELDDS(0.99)DFET(0.99)EDFDVR s:Phosphorylated S,t:Phosphorylated T CTNNA1 100754.2 12 26 169.1 491.55 HUMAN 1 3.8696 18.5894 LDDSRTNTPQGVLPS-p Q14004-2;T1058-p LDDSRTNTPQGVLPS 0.1560557092084 0.00714231278100688 0.320333333333333 0.474 16.1919116852304 30.719781386555 0.320333333333333 0.474 0.0240330467618296 0.000847270062613738 3.10512657925971 6.64327917615997 Q14004 CDK13 Q14004.2.T1058.p_CDK13 Q14004-2_S1054sT1058t_2_2_1054_1058 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.26543.26543.4 14.03 12.23 1.216 6 2 2 0 790.6505 2999.6414 S1054s T1058t TMT10 1046 (K) DLSLGLDDsRTNtPQGVLPSSQLK (S) DLS(0.0)LGLDDS(0.99)RT(0.0)NT(0.99)PQGVLPS(0.0)S(0.0)QLK K:TMT10,s:Phosphorylated S,t:Phosphorylated T CDK13 159173.6 4 24 145.1 520.12 HUMAN 1 16.1919 30.7198 LDDSYDESDEEEVRA-p Q14687;S766-p LDDSYDESDEEEVRA 0.820904102287946 0.380728624405919 0.0336666666666667 0.102666666666667 1.65070339586409 5.57256470456474 0.0336666666666667 0.102666666666667 0.683800887948933 0.277168281768577 0.429978889308888 1.20775761884089 Q14687 GSE1 Q14687.S766.p_GSE1 Q14687_S762sS766s_2_2_762_766 Q14687 Q14687|Q14687-3|Q14687-2 Genetic suppressor element 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19979.19979.3 13.81 13.81 1.435 6 2 2 0 1076.7674 3068.3595 S762s S766s TMT10 754 (K) GYYYDLDDsYDEsDEEEVRAHLR (C) GY(0.0)Y(0.0)Y(0.0)DLDDS(0.99)Y(0.0)DES(0.99)DEEEVRAHLR s:Phosphorylated S GSE1 136446.7 9 18 221.1 428.09 HUMAN 1 1.6507 5.5726 LDDTEEPSPPEDKMF-p O94806;S364-p LDDTEEPSPPEDKMF 0.957246455101486 0.428983830333575 0.00933333333333333 -0.099 0.371267289007715 4.89322443653628 0.00933333333333333 -0.099 0.918064662381213 0.32409889949127 0.107765616698469 -1.08423893192299 O94806 PRKD3 O94806.S364.p_PRKD3 O94806_S364s _1_1_364_364 O94806 O94806|O94806-2 Serine/threonine-protein kinase D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10063.10063.2 13.62 13.62 2.929 2 1 1 0 919.4056 1757.8279 S364s Hydrogen 356 (R) GLDDTEEPsPPEDK (M) GLDDT(0.0)EEPS(0.99)PPEDK K:TMT10-Lys-Only,s:Phosphorylated S PRKD3 101838.2 2 11 1565.1 131.21 HUMAN 1 0.3713 -4.8932 LDDVSIRSPETKCPK-p Q12830;S1300-p LDDVSIRSPETKCPK 0.885956158997355 0.0205007663178049 0.0213333333333333 -0.348333333333333 1.03288737955598 23.1102538696915 0.0213333333333333 -0.348333333333333 0.788335823235662 0.00488623795683119 0.282107656933703 -4.57538363787869 Q12830 BPTF Q12830.S1300.p_BPTF Q12830_S1300s _1_1_1300_1300 Q12830 Q12830|Q12830-2|Q12830-4 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13355.13355.3 12.56 12.56 1.456 3 1 1 0 756.7377 2188.2338 S1300s TMT10 1290 (K) DRVLDDVSIRsPETK (C) DRVLDDVS(0.0)IRS(0.99)PET(0.0)K K:TMT10,s:Phosphorylated S BPTF 340995.1 8 12 94.1 610.41 HUMAN 1 1.0329 -23.1103 LDDYGARSMSSADVE-p I3L4C2;S542-p LDDYGARSMSSADVE 0.963529162369171 0.128233461004709 0.00699999999999999 -0.210333333333333 0.31044133222874 11.7624144338312 0.00699999999999999 -0.210333333333333 0.931013260626437 0.0666436165061718 0.0906743612560182 -2.28914740521246 I3L4C2 BAIAP2 I3L4C2.S542.p_BAIAP2 I3L4C2_S542s _1_1_542_542 I3L4C2 I3L4C2|Q9UQB8-5 Brain-specific angiogenesis inhibitor 1-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20018.20018.2 10.74 10.74 2.149 3 1 1 0 804.3715 1527.7675 S542s TMT10 542 (R) sMSSADVEVARF (-) S(0.99)MS(0.0)S(0.0)ADVEVARF s:Phosphorylated S BAIAP2 61608.4 4 18 386.1 333.05 HUMAN 1 0.3104 -11.7624 LDDYREESEEYMAAA-p Q16625;S471-p LDDYREESEEYMAAA 0.447122526893569 0.0902161804667645 -0.126 0.248666666666667 6.44680421118246 13.824035184307 -0.126 0.248666666666667 0.226631137653569 0.0414568673150782 -1.36378755898996 2.65909667059232 Q16625 OCLN Q16625.S471.p_OCLN Q16625_S471s _1_1_471_471 Q16625 Q16625|A0A0G2JMZ8|Q16625-2|Q16625-4|Q16625-5 Occludin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16668.16668.3 21.72 21.72 8.258 4 1 1 0 969.7351 2827.2202 S471s TMT10 463 (K) ELDDYREEsEEYMAAADEYNR (L) ELDDY(0.0)REES(0.99)EEY(0.0)MAAADEY(0.0)NR s:Phosphorylated S OCLN 59542.1 1 12 840.1 214.78 HUMAN 1 -6.4468 13.824 LDEDDVDTVVDEQPK-p Q96JN0-3;T1090-p LDEDDVDTVVDEQPK 0.911605742223265 0.223872840714642 -0.0166666666666667 0.137333333333333 0.785694798650785 8.56073133548143 -0.0166666666666667 0.137333333333333 0.834508030247396 0.139292222036092 -0.219223206923056 1.73173206277166 Q96JN0 LCOR Q96JN0.3.T1090.p_LCOR Q96JN0-3_T1090t _1_1_1090_1090 Q96JN0-3 Q96JN0-3|A0A1P0AZG4 Isoform 3 of Ligand-dependent corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18819.18819.3 14.77 13.51 4.961 3 1 1 0 1066.8175 3118.4588 T1090t TMT10 1073 (K) ENGASESGDPLDEDDVDtVVDEQPK (F) ENGAS(0.0)ES(0.0)GDPLDEDDVDT(0.99)VVDEQPK K:TMT10,t:Phosphorylated T LCOR 172300.7 2 15 673.1 247.79 HUMAN 1 -0.7857 8.5607 LDEDLDKTLEENKAF-p Q96Q89-2;T560-p LDEDLDKTLEENKAF 0.425998757587894 0.00512820455408824 -0.118 -0.856333333333333 6.82816618770986 33.329119283576 -0.118 -0.856333333333333 0.207578983652265 0.000464609484966086 -1.43089980534615 -7.49888541848536 Q96Q89 KIF20B Q96Q89.2.T560.p_KIF20B Q96Q89-2_T560t _1_1_560_560 Q96Q89-2 Q96Q89-2|Q96Q89-3|Q96Q89-4 Isoform 2 of Kinesin-like protein KIF20B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21740.21740.3 13.2 3.38 99 1 1 1 0 814.773 2362.332 T560t TMT10 552 (K) LLDEDLDKtLEENK (A) LLDEDLDKT(1.0)LEENK K:TMT10,t:Phosphorylated T KIF20B 215641.1 2 7 486.1 295.59 HUMAN 1 -6.8282 -33.3291 LDEDSNLSPSPLRDL-p Q9C086;S130-p LDEDSNLSPSPLRDL 0.461449271051433 0.201289487511008 -0.192666666666667 0.197333333333333 6.1933921533713 9.15906165972038 -0.192666666666667 0.197333333333333 0.240248555234501 0.12136510445959 -1.3189425639685 1.83522782359513 Q9C086 INO80B Q9C086.S130.p_INO80B Q9C086_S130s _1_1_130_130 Q9C086 J3KQ70|Q9C086|F8WCL7|B8ZZ93 INO80 complex subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23949.23949.3 10.99 10.99 2.276 3 1 1 0 670.3244 1928.9915 S130s TMT10 121 (R) AWLDEDSNLsPSPLR (D) AWLDEDS(0.0)NLS(0.99)PS(0.0)PLR s:Phosphorylated S INO80B 39035.8 1 4 1391.1 147.13 HUMAN 1 -6.1934 9.1591 LDEEDNSSSSEEDRE-p Q8N3X1-2;S966-p LDEEDNSSSSEEDRE 0.731724827574726 0.00417215414210897 0.049 0.751666666666667 2.57241101941528 35.01259507975 0.049 0.751666666666667 0.553042997877144 0.000315311994759244 0.632140680203922 8.0988513405757 Q8N3X1 FNBP4 Q8N3X1.2.S966.p_FNBP4 Q8N3X1-2_S965sS966s_2_2_965_966 Q8N3X1-2 Q8N3X1-2 Isoform 2 of Formin-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9263.9263.4 13.48 13.48 1.216 6 2 2 0 751.5661 2843.3067 S965s S966s TMT10 958 (R) ELDEEDNssSSEEDRESTAQK (R) ELDEEDNS(0.99)S(0.99)S(0.0)S(0.0)EEDRES(0.0)T(0.0)AQK K:TMT10,s:Phosphorylated S FNBP4 110905.5 3 17 405.1 325.34 HUMAN 1 2.5724 35.0126 LDEEGGRSPRLRPRS-p O60307;S146-p LDEEGGRSPRLRPRS 0.639555125948181 0.966504145237237 -0.0876666666666667 0.00700000000000004 3.62537860026034 0.209701207128299 -0.0876666666666667 0.00700000000000007 0.433972430044815 0.952861718274815 -0.84480692940826 0.0618980568927663 O60307 MAST3 O60307.S146.p_MAST3 O60307_S146s _1_1_146_146 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8090.8090.3 15.42 10.61 8.58 3 1 1 0 647.6349 1860.9249 S146s TMT10 134 (R) SSENVLDEEGGRsPR (L) S(0.0)S(0.0)ENVLDEEGGRS(0.99)PR s:Phosphorylated S MAST3 143933.5 1 24 121.3 549.41 HUMAN 1 -3.6254 0.2097 LDELHRKYGTDLSRG-p P05023-4;Y55-p LDELHRKYGTDLSRG 0.719737881716904 0.380728624405919 0.126333333333333 -0.152 2.69617111010079 5.57284544632949 0.126333333333333 -0.152 0.537505470892252 0.277150365308474 0.657995476688409 -1.20780814160312 P05023 ATP1A1 P05023.4.Y55.p_ATP1A1 P05023-4_Y55y _1_1_55_55 P05023-4 P05023|P05023-4 Isoform 4 of Sodium/potassium-transporting ATPase subunit alpha-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.7492.7565.2 13.42 2.36 1.824 3 1 1 0 560.7658 1040.5574 Y55y TMT10 55 (K) yGTDLSR (G) Y(0.99)GT(0.0)DLS(0.0)R y:Phosphorylated Y ATP1A1 114310.4 2 1 14.1 89.11 HUMAN 1 2.6962 -5.5728 LDELVVPSPDFPVPS-p Q5T5X7;S710-p LDELVVPSPDFPVPS 0.17368064594083 0.00908726168906131 -0.465666666666667 0.584 15.1498215315355 28.8800150387242 -0.465666666666667 0.584 0.0305504665436455 0.00129419135992388 -2.90659784531357 6.08929121909014 Q5T5X7 BEND3 Q5T5X7.S710.p_BEND3 Q5T5X7_S710s _1_1_710_710 Q5T5X7 Q5T5X7 BEN domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.37335.37335.4 18.59 18.59 4.844 4 1 1 0 794.6801 3095.7321 S710s TMT10 701 (K) IPLDELVVPsPDFPVPSPYLLSDK (E) IPLDELVVPS(0.99)PDFPVPS(0.0)PY(0.0)LLS(0.0)DK K:TMT10,s:Phosphorylated S BEND3 95614 2 6 2481.1 81.71 HUMAN 1 -15.1498 28.88 LDESELDSEAELMRS-p Q96RS0;S89-p LDESELDSEAELMRS 0.166566349359417 0.584464991269668 -0.226 -0.0516666666666666 15.5670857911978 3.15022801508609 -0.226 -0.0516666666666667 0.027751816862313 0.484146948033395 -2.98550069215357 -0.750655146468344 Q96RS0 TGS1 Q96RS0.S89.p_TGS1 Q96RS0_S89s _1_1_89_89 Q96RS0 Q96RS0 Trimethylguanosine synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25317.25317.2 19.93 19.93 2.527 2 1 1 0 1087.0021 2093.027 S89s TMT10 79 (K) GIGLDESELDsEAELMR (S) GIGLDES(0.0)ELDS(0.99)EAELMR s:Phosphorylated S TGS1 97473.9 6 3 1387.1 147.41 HUMAN 1 -15.5671 -3.1502 LDESRHMTQEVVTQY-p Q9UBE8;T298-p LDESRHMTQEVVTQY 0.0923868882552928 0.857103291074652 0.321666666666667 0.037 22.0219339099536 0.944597032878908 0.321666666666667 0.0370000000000001 0.00627778747174156 0.804526394364675 4.32694682505504 0.259897439904987 Q9UBE8 NLK Q9UBE8.T298.p_NLK Q9UBE8_T298t _1_1_298_298 Q9UBE8 Q9UBE8 Serine/threonine-protein kinase NLK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12691.12691.3 12.78 12.78 7.657 4 1 1 0 621.9594 1783.8999 T298t TMT10 296 (R) HMtQEVVTQYYR (A) HMT(0.99)QEVVT(0.0)QY(0.0)Y(0.0)R t:Phosphorylated T NLK 59023.5 1 1 6260.1 12.78 HUMAN 1 22.0219 0.9446 LDEVVLLSPVPELRD-p Q9H1A4;S555-p LDEVVLLSPVPELRD 0.213657866069213 0.826399357466574 -0.242333333333333 0.0626666666666666 12.9193221252593 1.15845011299773 -0.242333333333333 0.0626666666666666 0.0510584689095993 0.765869877707068 -2.49653931560221 0.313133420219071 Q9H1A4 ANAPC1 Q9H1A4.S555.p_ANAPC1 Q9H1A4_S555s _1_1_555_555 Q9H1A4 Q9H1A4 Anaphase-promoting complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37314.37314.3 25.35 25.35 14.417 2 1 1 0 753.4239 2178.2947 S555s TMT10 544 (K) LLGSLDEVVLLsPVPELR (D) LLGS(0.0)LDEVVLLS(0.99)PVPELR s:Phosphorylated S ANAPC1 218664.2 3 9 460.1 305.66 HUMAN 1 -12.9193 1.1585 LDFIESDSPCSSEAL-p A0A0U1RQK7;S1598-p LDFIESDSPCSSEAL 0.726261487694244 0.0152850768162054 0.063 0.578666666666667 2.63508364763402 25.1180220774543 0.063 0.578666666666667 0.545119396272321 0.0030774980913397 0.645266444152698 5.06736671330891 A0A0U1RQK7 NotFound A0A0U1RQK7.S1598.p_NotFound A0A0U1RQK7_S1598s _1_1_1598_1598 A0A0U1RQK7 A0A0U1RQK7|A0A0A0MSA7|O43432-3|O43432-4 Eukaryotic translation initiation factor 4 gamma 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23244.23244.4 21.2 21.2 2.204 5 1 1 0 695.8552 2700.4369 S1598s TMT10 1591 (K) LDFIESDsPCSSEALSKK (E) LDFIES(0.0)DS(0.99)PCS(0.0)S(0.0)EALS(0.0)KK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EIF4G3 196410.6 3 8 857.1 210.84 HUMAN 1 2.6351 25.118 LDFNDEFSDLDGVVQ-p Q96HH9;S252-p LDFNDEFSDLDGVVQ 0.306383440584975 0.432284490071129 0.184333333333333 -0.093 9.62558322549855 4.85348276833516 0.184333333333333 -0.093 0.109003809846826 0.327078293478014 1.91672837219902 -1.07692611370985 Q96HH9 GRAMD3 Q96HH9.S252.p_GRAMD3 Q96HH9_S252s _1_1_252_252 Q96HH9 Q96HH9-3|Q96HH9-2|Q96HH9-4|E9PD09|Q96HH9-5|B7Z4W8 GRAM domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28798.28798.3 27.68 23.58 15.061 3 1 1 0 1043.8288 3049.5064 S252s TMT10 237 (R) ADRPSSLPLDFNDEFsDLDGVVQQR (R) ADRPS(0.0)S(0.0)LPLDFNDEFS(0.99)DLDGVVQQR s:Phosphorylated S GRAMD2B 48324.7 9 9 735.1 235.43 HUMAN 1 9.6256 -4.8535 LDFRPVVSPANGVEG-p Q8ND24;S176-p LDFRPVVSPANGVEG 0.996421434325015 0.188375089794432 -0.000666666666666677 0.130333333333333 0.028270405222143 9.53546234398379 -0.000666666666666683 0.130333333333333 0.993511639543134 0.111289390932696 -0.00851443345166135 1.90037602479207 Q8ND24 RNF214 Q8ND24.S176.p_RNF214 Q8ND24_S176s _1_1_176_176 Q8ND24 Q8ND24 RING finger protein 214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19173.19173.5 19.96 12.84 3.037 6 1 1 0 909.2428 4462.2123 S176s TMT10 162 (K) EGNRDTSLDFRPVVsPANGVEGVRVDQDDDQDSSSLK (L) EGNRDT(0.0)S(0.0)LDFRPVVS(0.99)PANGVEGVRVDQDDDQDS(0.0)S(0.0)S(0.0)LK K:TMT10,s:Phosphorylated S RNF214 78407.7 2 8 887.1 205.7 HUMAN 1 -0.0283 9.5355 LDFSAMFSPPVNSGK-p Q99081-3;S28-p LDFSAMFSPPVNSGK 0.28377835512685 0.0289654232096903 -0.199 -0.41 10.3249287775538 20.8246839979277 -0.199 -0.41 0.0927912707375942 0.00827049684305154 -2.0382225775617 -4.05421948122801 Q99081 TCF12 Q99081.3.S28.p_TCF12 Q99081-3_S28s _1_1_28_28 Q99081-3 Q99081-3|H0YML2 Isoform 3 of Transcription factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.37125.37125.3 21.85 21.85 3.412 4 1 1 0 898.1176 2612.3682 S28s TMT10 16 (K) ELSDLLDFSAMFsPPVNSGK (T) ELS(0.0)DLLDFS(0.0)AMFS(0.99)PPVNS(0.0)GK K:TMT10,s:Phosphorylated S TCF12 76072.1 1 1 1464.1 140.15 HUMAN 1 -10.3249 -20.8247 LDGAHGASLTDLANL-p Q9UBC2-2;S575-p LDGAHGASLTDLANL 0.331399411402475 0.404932796731183 0.140333333333333 0.0793333333333334 8.96037111426499 5.22493789800633 0.140333333333333 0.0793333333333334 0.127046553647262 0.300266035713356 1.8015027761473 1.1448836382582 Q9UBC2 EPS15L1 Q9UBC2.2.S575.p_EPS15L1 Q9UBC2-2_S575s _1_1_575_575 Q9UBC2-2 Q9UBC2-2|M0R165|Q9UBC2-3|Q9UBC2-4|M0R2S2 Isoform 2 of Epidermal growth factor receptor substrate 15-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31464.31672.3 34.66 34.66 2.692 6 1 1 0 1223.2603 3587.8027 S575s TMT10 560 (R) SLEQYDQVLDGAHGAsLTDLANLSEGVSLAER (G) S(0.0)LEQY(0.0)DQVLDGAHGAS(0.99)LT(0.0)DLANLS(0.0)EGVS(0.0)LAER s:Phosphorylated S EPS15L1 99718.3 36 11 109.1 576.24 HUMAN 1 8.9604 5.2249 LDGDQDFSDGRTQKY-p A2AJT9;S296-p LDGDQDFSDGRTQKY 0.807399255272832 0.35927051923832 0.042 0.113333333333333 1.785585935459 5.8991193561496 0.042 0.113333333333333 0.662889906768082 0.257091704952471 0.460776948755621 1.26627512773786 A2AJT9 CXorf23 A2AJT9.S296.p_CXorf23 A2AJT9_S296s _1_1_296_296 A2AJT9 A2AJT9|A2AJT9-2|A2AJT9-3 BCLAF1 and THRAP3 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15619.15619.3 10.51 10.51 4.216 2 1 1 0 745.0363 2153.1239 S296s TMT10 288 (K) LLDGDQDFsDGRTQK (Y) LLDGDQDFS(0.99)DGRT(0.0)QK K:TMT10,s:Phosphorylated S BCLAF3 84269.3 1 7 1202.1 166.95 HUMAN 1 1.7856 5.8991 LDGEEDGSSDQSQAS-p Q9UNF1;S190-p LDGEEDGSSDQSQAS 0.735321298360423 0.274778902154237 -0.056 0.192666666666667 2.52716871478824 7.3929124275739 -0.056 0.192666666666667 0.558834395524916 0.182267298740538 -0.622622562317205 1.52918364525989 Q9UNF1 MAGED2 Q9UNF1.S190.p_MAGED2 Q9UNF1_S190s _1_1_190_190 Q9UNF1 Q9UNF1|Q9UNF1-2|Q5H909|Q5H907 Melanoma-associated antigen D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4406.4406.3 16.74 16.74 1.175 6 1 1 0 886.0527 2576.177 S190s TMT10 182 (K) HLDGEEDGsSDQSQASGTTGGRR (V) HLDGEEDGS(0.99)S(0.0)DQS(0.0)QAS(0.0)GT(0.0)T(0.0)GGRR s:Phosphorylated S MAGED2 65124.3 6 9 893.1 204.33 HUMAN 1 -2.5272 7.3929 LDGPPPHSPETPQFP-p Q3T8J9-3;S1976-p LDGPPPHSPETPQFP 0.583025369650104 0.704178166254588 -0.074 -0.042 4.31035956658426 2.09203138358941 -0.074 -0.042 0.370650033185515 0.617727394668128 -0.976009409406689 -0.529025470864841 Q3T8J9 GON4L Q3T8J9.3.S1976.p_GON4L Q3T8J9-3_S1976s _1_1_1976_1976 Q3T8J9-3 Q3T8J9|Q3T8J9-3 Isoform 3 of GON-4-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31480.31480.5 19.9 20.68 2.397 6 1 1 0 702.9792 3430.9027 S1976s TMT10 1967 (R) LLLDGPPPHsPETPQFPPTTGAVLYTVK (R) LLLDGPPPHS(0.99)PET(0.0)PQFPPT(0.0)T(0.0)GAVLY(0.0)T(0.0)VK K:TMT10,s:Phosphorylated S GON4L 250541.8 8 20 291.1 381.52 HUMAN 1 -4.3104 -2.092 LDHEPAVSPLLPRKE-p P00519-2;S588-p LDHEPAVSPLLPRKE 0.928542311014899 0.46623818074182 -0.0133333333333333 0.072 0.639244891151835 4.41868386409951 -0.0133333333333333 0.072 0.86312860709728 0.361519405034816 -0.180766229287408 0.996180084010938 P00519 ABL1 P00519.2.S588.p_ABL1 P00519-2_S588s _1_1_588_588 P00519-2 P00519-2 Isoform IB of Tyrosine-protein kinase ABL1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20815.20815.4 25.5 25.5 9.787 2 1 1 0 606.549 2343.2142 S588s TMT10 574 (K) GQGESDPLDHEPAVsPLLPR (K) GQGES(0.0)DPLDHEPAVS(0.99)PLLPR s:Phosphorylated S ABL1 125637.1 4 3 347.1 352.28 HUMAN 1 -0.6392 4.4187 LDHPYCKSPLEAPLV-p Q96HI0;S465-p LDHPYCKSPLEAPLV 0.306383440584975 0.0654044961461682 -0.312333333333333 0.222 9.62305066725606 15.7594534180602 -0.312333333333333 0.222 0.109067393202141 0.0265493967876202 -1.91628923835831 3.02004356968874 Q96HI0 SENP5 Q96HI0.S465.p_SENP5 Q96HI0_S465s _1_1_465_465 Q96HI0 Q96HI0|Q96HI0-2 Sentrin-specific protease 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29043.29043.5 23.23 23.23 4.401 6 1 1 0 1004.9407 4940.7035 S465s TMT10 450 (K) QSILSSELLDHPYCKsPLEAPLVCSGLKLENQVGGGK (N) QS(0.0)ILS(0.0)S(0.0)ELLDHPY(0.0)CKS(0.99)PLEAPLVCS(0.0)GLKLENQVGGGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SENP5 88003.7 3 6 1582.1 129.81 HUMAN 1 -9.6231 15.7595 LDIEQFSTVKGVELE-p P43250;T485-p LDIEQFSTVKGVELE 0.787952750145453 0.135136659705656 0.0486666666666667 -0.155333333333333 1.99549434804299 11.4588968107038 0.0486666666666667 -0.155333333333333 0.631612280131784 0.0714677844573291 0.507804000153075 -2.23565200116379 P43250 GRK6 P43250.T485.p_GRK6 P43250_S484sT485t_2_2_484_485 P43250 P43250-2|P43250-3|F8W9W2 G protein-coupled receptor kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32062.32062.4 19.68 17.23 5.733 4 2 2 0 973.4818 3730.9671 S484s T485t TMT10 476 (K) DVLDIEQFstVKGVELEPTDQDFYQK (F) DVLDIEQFS(0.99)T(0.99)VKGVELEPT(0.0)DQDFY(0.0)QK K:TMT10,s:Phosphorylated S,t:Phosphorylated T GRK6 67245 5 4 3249.1 55.9 HUMAN 1 1.9955 -11.4589 LDIESYDSLERPLRK-p Q9H792;S1217-p LDIESYDSLERPLRK 0.178033734047368 0.0567520194336003 -0.220333333333333 -0.280666666666667 14.8183002029143 16.6051875347371 -0.220333333333333 -0.280666666666667 0.0329738744276313 0.0218514995963074 -2.84444218474364 -3.18291724841622 Q9H792 PEAK1 Q9H792.S1217.p_PEAK1 Q9H792_S1217s _1_1_1217_1217 Q9H792 Q9H792 Pseudopodium-enriched atypical kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20844.20844.4 18.21 18.21 1.393 3 1 1 0 608.0781 2349.3178 S1217s TMT10 1209 (K) GLDIESYDsLERPLRK (E) GLDIES(0.0)Y(0.0)DS(0.99)LERPLRK K:TMT10,s:Phosphorylated S PEAK1 195156.9 2 14 583.1 265.81 HUMAN 1 -14.8183 -16.6052 LDIKAGNSDSEEDDA-p Q641Q2;S158-p LDIKAGNSDSEEDDA 0.885069082704287 0.00248584650157384 -0.029 0.944666666666667 1.04759007122658 39.8488597552192 -0.029 0.944666666666667 0.785671487969448 0.000103541398003694 -0.285773660658877 10.0635865009995 Q641Q2 FAM21A Q641Q2.S158.p_FAM21A Q641Q2_S158s _1_1_158_158 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2|Q9Y4E1-4 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2993.2993.2 10.1 7.7 1.299 2 1 1 0 873.3437 1665.715 S158s TMT10 155 (K) AGNsDSEEDDANGR (V) AGNS(0.99)DS(0.0)EEDDANGR s:Phosphorylated S WASHC2A 147352.2 5 20 12.1 1178.3 HUMAN 1 -1.0476 39.8489 LDLFGDPSPSSKQNG-p Q9H201;S460-p LDLFGDPSPSSKQNG 0.238898769658179 0.255403135701365 -0.623666666666667 -0.134666666666667 11.8925366010419 7.80830532888602 -0.623666666666667 -0.134666666666667 0.0646764746951278 0.165641619158936 -2.31328798136792 -1.60139332015766 Q9H201 EPN3 Q9H201.S460.p_EPN3 Q9H201_S460s _1_1_460_460 Q9H201 Q9H201 Epsin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29181.29181.3 9.37 9.37 1.623 6 1 1 0 1245.9879 3655.9674 S460s TMT10 436 (K) EGLEQALPSGKPSSPVELDLFGDPsPSSK (Q) EGLEQALPS(0.0)GKPS(0.0)S(0.0)PVELDLFGDPS(0.99)PS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S EPN3 68392.2 1 11 953.1 196.01 HUMAN 1 -11.8925 -7.8083 LDLLSQMSPGDLAKV-p Q6UWE0;S604-p LDLLSQMSPGDLAKV 0.306023660774545 0.773308923712156 -0.221 0.0376666666666667 9.63916964575892 1.54444457019424 -0.221 0.0376666666666667 0.108663336385048 0.700737796200778 -1.91908427599522 0.405329967687036 Q6UWE0 LRSAM1 Q6UWE0.S604.p_LRSAM1 Q6UWE0_S604s _1_1_604_604 Q6UWE0 Q6UWE0|Q6UWE0-2|Q6UWE0-3 E3 ubiquitin-protein ligase LRSAM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35188.35188.3 17.66 17.03 2.929 3 1 1 0 742.7333 2146.2194 S604s TMT10 595 (R) LSLDLLSQMsPGDLAK (V) LS(0.0)LDLLS(0.0)QMS(0.99)PGDLAK K:TMT10,s:Phosphorylated S LRSAM1 84619.4 3 4 2054.1 100.32 HUMAN 1 -9.6392 1.5444 LDLNTSLSPSLLQPG-p I6L8A6;S347-p LDLNTSLSPSLLQPG 0.378157518317742 0.150277269319722 0.125666666666667 0.165666666666667 7.8052386208298 10.8297246231542 0.125666666666667 0.165666666666667 0.165758625913744 0.0826090328538102 1.60135553075026 2.12536336916042 I6L8A6 NotFound I6L8A6.S347.p_NotFound I6L8A6_S347s _1_1_347_347 I6L8A6 Q99708-2|I6L8A6|Q99708-3 DNA endonuclease RBBP8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25236.25236.3 15.6 15.6 1.172 5 1 1 0 908.183 2642.5696 S347s TMT10 338 (K) SGLDLNTSLsPSLLQPGKK (K) S(0.0)GLDLNT(0.0)S(0.0)LS(0.99)PS(0.0)LLQPGKK K:TMT10,s:Phosphorylated S RBBP8 103921.2 7 7 258.1 398.22 HUMAN 1 7.8052 10.8297 LDLRGKRSPTPGKGP-p E9PGC8;S2867-p LDLRGKRSPTPGKGP 0.238728055949939 0.64022604144687 0.204333333333333 -0.0516666666666667 11.8990628784703 2.63782662288127 0.204333333333333 -0.0516666666666667 0.0645793563469771 0.54477521116803 2.31444387273658 -0.645754807805089 E9PGC8 NotFound E9PGC8.S2867.p_NotFound E9PGC8_S2867s _1_1_2867_2867 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4803.4803.3 10.5 3.54 2.371 2 1 1 0 540.9556 1540.8848 S2867s TMT10 2867 (R) sPTPGKGPADR (A) S(0.99)PT(0.0)PGKGPADR K:TMT10,s:Phosphorylated S MAP1A 332906.7 5 42 20.1 1016.98 HUMAN 1 11.8991 -2.6378 LDLSDVHSPPKSPEG-p O95684;S156-p LDLSDVHSPPKSPEG 0.290884494360713 0.012379974589777 0.156666666666667 0.458 10.1103680738353 26.6222094256963 0.156666666666667 0.458 0.0974907008767841 0.00217660216807951 2.00089186114037 5.459320196473 O95684 FGFR1OP O95684.S156.p_FGFR1OP O95684_S156s _1_1_156_156 O95684 O95684 FGFR1 oncogene partner HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15813.15813.4 19.49 19.49 2.749 5 1 1 0 786.6633 3063.6566 S156s TMT10 141 (K) GPTTGEGALDLSDVHsPPKSPEGK (T) GPT(0.0)T(0.0)GEGALDLS(0.0)DVHS(0.99)PPKS(0.0)PEGK K:TMT10,s:Phosphorylated S FGFR1OP 43178.2 5 2 1485.1 137.99 HUMAN 1 10.1104 26.6222 LDLSPLATPIIRSKI-p P15336;T116-p LDLSPLATPIIRSKI 0.291613067200657 0.0933476904902908 0.208333333333333 0.289 10.0948627467855 13.6211263192921 0.208333333333333 0.289 0.0978393875182631 0.0434397550902007 1.99819629183397 2.6220944418813 P15336 ATF2 P15336.T116.p_ATF2 P15336_S112sT116t_2_2_112_116 P15336 P15336|P15336-5|P15336-4 Cyclic AMP-dependent transcription factor ATF-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.32817.32817.3 9.07 9.07 99 2 2 2 0 761.7508 2123.3026 S112s T116t TMT10 106 (K) KMPLDLsPLAtPIIR (S) KMPLDLS(1.0)PLAT(1.0)PIIR K:TMT10,s:Phosphorylated S,t:Phosphorylated T ATF2 54821.7 1 7 1174.1 169.92 HUMAN 1 10.0949 13.6211 LDLTENLTGSKRRPQ-p P46013;T1327-p LDLTENLTGSKRRPQ 0.125813604638611 0.0181705265422931 -0.408 -0.547333333333333 18.6988922388318 23.9678189201858 -0.408 -0.547333333333333 0.0134930700837668 0.00401068088339309 -3.60511472808763 -4.78136896454363 P46013 MKI67 P46013.T1327.p_MKI67 P46013_T1327t _1_1_1327_1327 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21827.21827.2 11.55 11.55 1.524 3 1 1 0 864.963 1648.9522 T1327t TMT10 1320 (K) LDLTENLtGSK (R) LDLT(0.0)ENLT(0.99)GS(0.0)K K:TMT10,t:Phosphorylated T MKI67 360912.4 2 39 5.1 1918.46 HUMAN 1 -18.6989 -23.9678 LDMEKLYSENEGMAS-p Q96EI5-2;S149-p LDMEKLYSENEGMAS 0.197771061122644 0.19076660608284 0.244 0.205 13.7163471854661 9.46235657457768 0.244 0.205 0.0424976858144709 0.113178606530316 2.64098543169484 1.88771711019124 Q96EI5 TCEAL4 Q96EI5.2.S149.p_TCEAL4 Q96EI5-2_S149s _1_1_149_149 Q96EI5-2 Q96EI5-2|A2RQR6 Isoform 2 of Transcription elongation factor A protein-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13535.13535.3 15.48 15.48 5.51 3 1 1 0 689.3273 1986.0003 S149s TMT10 147 (K) LYsENEGMASNQGK (M) LY(0.0)S(0.99)ENEGMAS(0.0)NQGK K:TMT10,s:Phosphorylated S TCEAL4 40919.8 2 1 3257.1 55.73 HUMAN 1 13.7163 9.4624 LDMNKGLSLQHIGRP-p O43414;S299-p LDMNKGLSLQHIGRP 0.767250503958229 0.877206448607223 0.043 0.0213333333333334 2.20426196217961 0.799276709850725 0.043 0.0213333333333334 0.601968552435603 0.831902307664131 0.553576755922594 0.222721070521337 O43414 ERI3 O43414.S299.p_ERI3 O43414_S299s _1_1_299_299 O43414 O43414|O43414-2|O43414-3 ERI1 exoribonuclease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12420.12420.4 13.97 13.97 7.387 2 1 1 0 632.8278 2448.3182 S299s TMT10 297 (K) GLsLQHIGRPHSGIDDCK (N) GLS(0.99)LQHIGRPHS(0.0)GIDDCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ERI3 37751 1 1 6099.1 13.97 HUMAN 1 2.2043 0.7993 LDNIFDNSDDDELGA-p Q71F56;S817-p LDNIFDNSDDDELGA 0.558156187420407 0.578397917371404 0.0923333333333333 0.0596666666666667 4.67803212018456 3.20792225619793 0.0923333333333334 0.0596666666666667 0.340562470776466 0.477757787006851 1.04471106433817 0.762225009494349 Q71F56 MED13L Q71F56.S817.p_MED13L Q71F56_S817s _1_1_817_817 Q71F56 Q71F56 Mediator of RNA polymerase II transcription subunit 13-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.35925.35925.4 28.13 28.13 7.166 8 1 1 0 1092.0206 4285.0946 S817s TMT10 792 (R) AGSSSLTQVTDLAPSLHDLDNIFDNsDDDELGAVSPALR (S) AGS(0.0)S(0.0)S(0.0)LT(0.0)QVT(0.0)DLAPS(0.0)LHDLDNIFDNS(0.99)DDDELGAVS(0.0)PALR s:Phosphorylated S MED13L 245507 5 9 415.1 321.44 HUMAN 1 4.678 3.2079 LDNNPLQSPPAQICI-p Q96II8-2;S255-p LDNNPLQSPPAQICI 0.682578198225975 0.882956186363427 -0.073 -0.0176666666666666 3.10905569675793 0.759293459930617 -0.073 -0.0176666666666667 0.488758620461946 0.839596566740935 -0.742477018948115 -0.212339538235005 Q96II8 LRCH3 Q96II8.2.S255.p_LRCH3 Q96II8-2_S255s _1_1_255_255 Q96II8-2 Q96II8-2|Q96II8-4|Q96II8-3|E9PD99 Isoform 2 of Leucine-rich repeat and calponin homology domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25359.25359.4 16.3 16.3 3.538 3 1 1 0 760.6588 2959.6439 S255s TMT10 242 (R) HLQTITLDNNPLQsPPAQICIK (G) HLQT(0.0)IT(0.0)LDNNPLQS(0.99)PPAQICIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LRCH3 90369.5 2 3 1119.1 175.39 HUMAN 1 -3.1091 -0.7593 LDPALGPSDEELLAS-p Q9H9A7;S243-p LDPALGPSDEELLAS 0.577239623752612 0.208732140692284 0.0843333333333333 0.135666666666667 4.39021147544411 8.95203204755185 0.0843333333333334 0.135666666666667 0.363897316072406 0.127290735309357 0.991021892046327 1.79941572875901 Q9H9A7 RMI1 Q9H9A7.S243.p_RMI1 Q9H9A7_S243s _1_1_243_243 Q9H9A7 Q9H9A7 RecQ-mediated genome instability protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.35795.35795.5 22.14 19.37 1.678 7 1 1 0 831.5849 4073.936 S243s TMT10 232 (R) VTDVLDPALGPsDEELLASLDENDELTANNDTSSER (C) VT(0.0)DVLDPALGPS(0.99)DEELLAS(0.0)LDENDELT(0.0)ANNDT(0.0)S(0.0)S(0.0)ER s:Phosphorylated S RMI1 70713.7 7 3 2180.1 94.33 HUMAN 1 4.3902 8.952 LDPDAIPSPIQVIED-p P53992;S328-p LDPDAIPSPIQVIED 0.474773316010134 0.850016317756203 0.109666666666667 -0.0216666666666667 5.9567881480102 0.991452187683624 0.109666666666667 -0.0216666666666667 0.253700419418128 0.795893176295177 1.27686191242025 -0.27170619145899 P53992 SEC24C P53992.S328.p_SEC24C P53992_S328s _1_1_328_328 P53992 P53992|G5EA31 Protein transport protein Sec24C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24225.24225.5 20.55 12.21 5.919 3 1 1 0 757.9893 3705.951 S328s TMT10 320 (K) RLDPDAIPsPIQVIEDDRNNRGTEPFVTGVR (G) RLDPDAIPS(0.99)PIQVIEDDRNNRGT(0.0)EPFVT(0.0)GVR s:Phosphorylated S SEC24C 119863.1 2 1 2432.1 83.59 HUMAN 1 5.9568 -0.9915 LDPDDEDSDYHQEAY-p Q9UH92-2;S31-p LDPDDEDSDYHQEAY 0.111603163818785 0.712660796951656 -0.420666666666667 -0.0376666666666667 19.9049336625551 2.02439798576578 -0.420666666666667 -0.0376666666666667 0.0102213117329039 0.627422662595709 -3.85857774982645 -0.51413843256421 Q9UH92 MLX Q9UH92.2.S31.p_MLX Q9UH92-2_S31s _1_1_31_31 Q9UH92-2 Q9UH92-2 Isoform Alpha of Max-like protein X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18061.18061.4 11.78 11.78 1.238 7 1 1 0 877.3751 3426.5174 S31s TMT10 15 (K) VEYAYSDNSLDPDDEDsDYHQEAYK (E) VEY(0.0)AY(0.0)S(0.0)DNS(0.0)LDPDDEDS(0.99)DY(0.0)HQEAY(0.0)K K:TMT10,s:Phosphorylated S MLX 25075.5 1 2 2068.3 99.55 HUMAN 1 -19.9049 -2.0244 LDPDPSHSPSDKVGR-p Q8NFQ8;S120-p LDPDPSHSPSDKVGR 0.378756494521567 0.0831776836997244 -0.217 -0.314333333333333 7.79012737079679 14.2970819532241 -0.217 -0.314333333333333 0.166336386617036 0.0371784949397461 -1.5987309191398 -2.74593844918675 Q8NFQ8 TOR1AIP2 Q8NFQ8.S120.p_TOR1AIP2 Q8NFQ8_S120s_1_1_120_120 Q8NFQ8 Q8NFQ8 Torsin-1A-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10611.10611.5 10.33 10.33 1.221 4 1 1 0 646.7211 3148.6064 N107n S120s Hydrogen 100 (K) GHHLPSEnLGKEPLDPDPSHsPSDK (V) GHHLPS(0.0)EN(1.0)LGKEPLDPDPS(0.0)HS(0.99)PS(0.0)DK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S TOR1AIP2 51490.6 5 3 2317.1 88.08 HUMAN 1 -7.7901 -14.2971 LDPDSIPSPIQVIEN-p O94855-2;S267-p LDPDSIPSPIQVIEN 0.952442048084725 0.441810834660231 -0.00900000000000001 -0.0753333333333333 0.419607971226353 4.72357116611425 -0.00900000000000001 -0.0753333333333333 0.90790248098513 0.337010074209747 -0.121204813262427 -1.05294565889478 O94855 SEC24D O94855.2.S267.p_SEC24D O94855-2_S267s _1_1_267_267 O94855-2 O94855-2 Isoform 2 of Protein transport protein Sec24D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25653.25653.3 17.93 12.65 5.689 2 1 1 0 858.7889 2494.3917 S267s TMT10 259 (K) KLDPDSIPsPIQVIENDR (A) KLDPDS(0.0)IPS(0.99)PIQVIENDR K:TMT10,s:Phosphorylated S SEC24D 114619.3 1 1 4263.1 34.52 HUMAN 1 -0.4196 -4.7236 LDPGSAGSLSPQDPV-p Q9P260-2;S54-p LDPGSAGSLSPQDPV 0.101218422745456 0.568089684240398 0.319666666666667 0.0956666666666667 21.0304111481091 3.31020751337248 0.319666666666667 0.0956666666666667 0.00788785439489519 0.466637083059238 4.10366071811227 0.782627913981639 Q9P260 KIAA1468 Q9P260.2.S54.p_KIAA1468 Q9P260-2_S54sS56s_2_2_54_56 Q9P260-2 Q9P260-2|A0A075B785 Isoform 2 of LisH domain and HEAT repeat-containing protein KIAA1468 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29419.29419.4 15.13 15.13 2.133 9 2 2 0 1236.8604 4784.4652 S54s S56s TMT10 41 (R) LGAGSGLDPGSAGsLsPQDPVALGSSARPGLPGEASAAAVALGGTGETPAR (L) LGAGS(0.0)GLDPGS(0.0)AGS(0.99)LS(0.99)PQDPVALGS(0.0)S(0.0)ARPGLPGEAS(0.0)AAAVALGGT(0.0)GET(0.0)PAR s:Phosphorylated S KIAA1468 139711.8 2 12 724.1 236.86 HUMAN 1 21.0304 3.3102 LDPLPVPTEEGNPLL-p Q15758;T514-p LDPLPVPTEEGNPLL 0.514864443527408 0.237071382283059 0.0886666666666667 -0.124666666666667 5.32313051599241 8.23418416202668 0.0886666666666667 -0.124666666666667 0.293553287500522 0.150169447802637 1.1629575690309 -1.67521527866508 Q15758 SLC1A5 Q15758.T514.p_SLC1A5 Q15758_T514t _1_1_514_514 Q15758 Q15758|M0QXM4|Q15758-2|Q15758-3 Neutral amino acid transporter B(0) HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.34818.34818.4 9.77 8.22 7.576 2 1 1 0 674.8702 2616.49 T514t TMT10 503 (K) SELPLDPLPVPtEEGNPLLK (H) S(0.0)ELPLDPLPVPT(0.99)EEGNPLLK K:TMT10,t:Phosphorylated T SLC1A5 57053.7 2 4 1953.1 105.31 HUMAN 1 5.3231 -8.2342 LDPPLKKSPKQTGYG-p A0A0U1RRH6;S905-p LDPPLKKSPKQTGYG 0.92569936661395 0.945882769785327 0.06 -0.0309999999999999 0.661709143653864 0.346239060399399 0.06 -0.0309999999999998 0.858675527653053 0.923370709293589 0.186727449156044 -0.100748546690335 A0A0U1RRH6 NotFound A0A0U1RRH6.S905.p_NotFound A0A0U1RRH6_S905s _1_1_905_905 A0A0U1RRH6 A0A0U1RRH6|O94880-2 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17331.17331.4 11.31 10.54 3.832 2 1 1 0 707.6294 2747.5344 S905s Hydrogen 891 (R) LCYHFGCLDPPLKKsPK (Q) LCY(0.0)HFGCLDPPLKKS(0.99)PK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S PHF14 109152.4 1 18 126.1 543.2 HUMAN 1 0.6617 -0.3462 LDQLLDMSYEQLMQL-p K7EQJ5;S29-p LDQLLDMSYEQLMQL 0.55876283968831 0.509198654809084 0.141666666666667 -0.075 4.66664755330896 3.92997024048908 0.141666666666667 -0.075 0.341456390134151 0.404578664014942 1.04259936968348 -0.903568399630649 K7EQJ5 NotFound K7EQJ5.S29.p_NotFound K7EQJ5_S29s _1_1_29_29 K7EQJ5 K7ELC2|P62841|K7EQJ5|K7EJ78 40S ribosomal protein S15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37414.37414.3 24.68 24.68 3.022 4 1 1 0 966.4595 2817.4 S29s TMT10 19 (R) GVDLDQLLDMsYEQLMQLYSAR (Q) GVDLDQLLDMS(0.99)Y(0.0)EQLMQLY(0.0)S(0.0)AR s:Phosphorylated S RPS15 16570.2 1 1 4309.1 33.9 HUMAN 1 4.6666 -3.93 LDQNIGRSEPDLRCS-p Q6AWC2-6;S262-p LDQNIGRSEPDLRCS 0.188062996572396 0.414043326121488 0.281333333333333 -0.172333333333333 14.2380008525241 5.09407758232929 0.281333333333333 -0.172333333333333 0.037687724346399 0.309451250314861 2.73672145194603 -1.12104048559903 Q6AWC2 WWC2 Q6AWC2.6.S262.p_WWC2 Q6AWC2-6_S262s _1_1_262_262 Q6AWC2-6 Q6AWC2-6|Q6AWC2-4|Q6AWC2-2|Q6AWC2-5 Isoform 6 of Protein WWC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14947.14947.4 10.19 10.19 99 1 1 1 0 527.263 2026.0668 S262s TMT10 253 (R) FHLDQNIGRsEPDLR (C) FHLDQNIGRS(1.0)EPDLR s:Phosphorylated S WWC2 137930.4 1 2 1158.1 171.22 HUMAN 1 14.238 -5.0941 LDQQSLPSEPEETLS-p Q8NC44;S347-p LDQQSLPSEPEETLS 0.175358480804402 0.0142868295738274 0.220666666666667 0.386666666666667 15.0480635018171 25.583468804203 0.220666666666667 0.386666666666667 0.0312747358167491 0.00276473251147769 2.88747039270883 5.1864145317809 Q8NC44 FAM134A Q8NC44.S347.p_FAM134A Q8NC44_S344sS347s_2_2_344_347 Q8NC44 Q8NC44 Reticulophagy regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26447.26447.3 17.5 17.5 2.752 8 2 2 0 1159.1929 3315.6277 S344s S347s TMT10 328 (R) ATTPQLTDVSEDLDQQsLPsEPEETLSR (D) AT(0.0)T(0.0)PQLT(0.0)DVS(0.0)EDLDQQS(0.99)LPS(0.99)EPEET(0.0)LS(0.0)R s:Phosphorylated S RETREG2 58171.3 1 9 1304.1 156.18 HUMAN 1 15.0481 25.5835 LDQRSIGSDSQGRAT-p E7ETA6;S119-p LDQRSIGSDSQGRAT 0.148303739525478 0.0790756509678885 0.273666666666667 -0.286 16.7286048075485 14.6258035204149 0.273666666666667 -0.286 0.0212392667433604 0.0344682828348106 3.20937062834049 -2.80678471784321 E7ETA6 PCM1 E7ETA6.S119.p_PCM1 E7ETA6_S119s _1_1_119_119 E7ETA6 E7ETA6|Q15154-2|A6NNN6|Q15154-3|E9PGW9 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5012.5012.2 13.71 13.71 2.801 3 1 1 0 608.282 1135.5905 S119s TMT10 116 (R) SIGsDSQGR (A) S(0.0)IGS(0.99)DS(0.0)QGR s:Phosphorylated S PCM1 229381.8 2 7 13.1 1159.95 HUMAN 1 16.7286 -14.6258 LDQTPGSSMDNLDSS-p Q9HCK4-3;S1260-p LDQTPGSSMDNLDSS 0.310133831979954 0.524712536761929 0.163 0.0653333333333334 9.50520955262904 3.76338403651172 0.163 0.0653333333333333 0.112067335091292 0.42039892453871 1.89586114164712 0.871479830384678 Q9HCK4 ROBO2 Q9HCK4.3.S1260.p_ROBO2 Q9HCK4-3_S1259sS1260s_2_2_1259_1260 Q9HCK4-3 Q9HCK4-3|A0A087WWM5 Isoform 3 of Roundabout homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22578.22578.3 12.93 12.93 2.586 6 2 2 0 881.0683 2481.2543 S1259s S1260s TMT10 1252 (R) ALDQTPGssMDNLDSSVTGK (A) ALDQT(0.0)PGS(0.99)S(0.99)MDNLDS(0.0)S(0.0)VT(0.0)GK K:TMT10,s:Phosphorylated S ROBO2 153915.7 3 6 2233.1 92.45 HUMAN 1 9.5052 3.7634 LDRARSRTPPSAPSQ-p Q9UQ35;T2409-p LDRARSRTPPSAPSQ 0.28244229315221 0.118216589718118 0.245 0.214666666666667 10.3826698209619 12.2283806959308 0.245 0.214666666666667 0.0915657417588576 0.059863475953642 2.04827884258648 2.37169968719974 Q9UQ35 SRRM2 Q9UQ35.T2409.p_SRRM2 Q9UQ35_T2409t _1_1_2409_2409 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3657.3657.2 9.47 6.33 2.088 5 1 1 0 790.3937 1499.8128 T2409t TMT10 2407 (R) SRtPPSAPSQSR (M) S(0.0)RT(0.99)PPS(0.0)APS(0.0)QS(0.0)R t:Phosphorylated T SRRM2 300351.7 13 156 2.1 3310.34 HUMAN 1 10.3827 12.2284 LDRDKSDSDTEGLLF-p Q9H4G0;S650-p LDRDKSDSDTEGLLF 0.688543015078292 0.583870912250936 0.0603333333333333 0.0693333333333334 3.04160528311433 3.1556578124635 0.0603333333333333 0.0693333333333334 0.496408799902068 0.483542018136153 0.728850204664831 0.751745958658608 Q9H4G0 EPB41L1 Q9H4G0.S650.p_EPB41L1 Q9H4G0_S650s _1_1_650_650 Q9H4G0 Q9H4G0|A0A0C4DH22|Q9H4G0-2|Q9H4G0-3 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20251.20251.2 12.65 12.65 1.266 4 1 1 0 818.3791 1555.7801 S650s TMT10 648 (K) SDsDTEGLLFSR (D) S(0.0)DS(0.99)DT(0.0)EGLLFS(0.0)R s:Phosphorylated S EPB41L1 99071.6 7 17 174.1 483.37 HUMAN 1 3.0416 3.1557 LDRKDKFSFDLGKGE-p Q02790;S78-p LDRKDKFSFDLGKGE 0.0716767422297244 0.00209694905349103 -1.19366666666667 0.986 24.7310255763605 41.6954408928504 -1.19366666666667 0.986 0.00336432112329931 6.76793081851503e-05 -4.97597480889235 10.9208686568582 Q02790 FKBP4 Q02790.S78.p_FKBP4 Q02790_S78s _1_1_78_78 Q02790 Q02790 Peptidyl-prolyl cis-trans isomerase FKBP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22415.22415.3 13.01 13.01 99 1 1 1 0 608.6715 1744.0248 S78s TMT10 75 (K) DKFsFDLGK (G) DKFS(1.0)FDLGK K:TMT10,s:Phosphorylated S FKBP4 52088.9 1 3 706.1 239.22 HUMAN 1 -24.731 41.6954 LDRPESQSPKRPPED-p Q8WUA4;S167-p LDRPESQSPKRPPED 0.295019037798013 0.0380883780325849 0.172 0.259 10.0004533249504 19.062924015072 0.172 0.259 0.0999895623520304 0.0124081661009228 1.98178921107559 3.67742995802775 Q8WUA4 GTF3C2 Q8WUA4.S167.p_GTF3C2 Q8WUA4_S167s _1_1_167_167 Q8WUA4 Q8WUA4|Q8WUA4-2|A0A087WZD8 General transcription factor 3C polypeptide 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7292.7292.3 12.22 7.94 2.403 2 1 1 0 603.9768 1729.9485 S167s TMT10 159 (K) DLDRPESQsPK (R) DLDRPES(0.0)QS(0.99)PK K:TMT10,s:Phosphorylated S GTF3C2 101761.7 6 4 753.1 231.45 HUMAN 1 10.0005 19.0629 LDRQLQDSCEEDLSE-p A6NKD9;S372-p LDRQLQDSCEEDLSE 0.103884021690019 0.388075623956266 -0.399 -0.13 20.7600784719164 5.46430061818706 -0.399 -0.13 0.00839444818599584 0.284164576283262 -4.04400362638064 -1.1882447777491 A6NKD9 CCDC85C A6NKD9.S372.p_CCDC85C A6NKD9_S372s _1_1_372_372 A6NKD9 A6NKD9|G3V2D7 Coiled-coil domain-containing protein 85C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10374.10374.3 9.58 4.96 8.268 2 1 1 0 630.6065 1809.8374 S372s Hydrogen 368 (R) QLQDsCEEDLSEK (E) QLQDS(0.99)CEEDLS(0.0)EK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S CCDC85C 45494 1 3 3824.1 42.43 HUMAN 1 -20.7601 -5.4643 LDRSQATSPGQTNGD-p Q96JY6-5;S337-p LDRSQATSPGQTNGD 0.87289946291738 0.179123454849365 0.0256666666666667 -0.14 1.15536977948204 9.82138204157419 0.0256666666666667 -0.14 0.766413281223437 0.104198578879039 0.312409724085753 -1.94992176736748 Q96JY6 PDLIM2 Q96JY6.5.S337.p_PDLIM2 Q96JY6-5_S337s _1_1_337_337 Q96JY6-5 Q96JY6-5|Q96JY6-3|A0A087WVI1 Isoform 5 of PDZ and LIM domain protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17259.17259.2 15.47 15.47 1.238 7 1 1 0 1214.5852 2348.1891 S337s TMT10 333 (R) SQATsPGQTNGDSSLEVLATR (F) S(0.0)QAT(0.0)S(0.99)PGQT(0.0)NGDS(0.0)S(0.0)LEVLAT(0.0)R s:Phosphorylated S PDLIM2 63315 2 2 1306.1 155.86 HUMAN 1 1.1554 -9.8214 LDSDEDFSDFDEKTD-p P11388-2;S1363-p LDSDEDFSDFDEKTD 0.585529557058559 0.66239093090053 -0.273666666666667 -0.205 4.27528992658084 2.44984740875004 -0.273666666666667 -0.205 0.373655180053681 0.568872918089433 -0.969399175190412 -0.606193590535834 P11388 TOP2A P11388.2.S1363.p_TOP2A P11388-2_S1358sS1363s_2_2_1358_1363 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28147.28147.4 12.55 12.55 6.886 4 2 2 0 783.8461 2972.4326 S1358s S1363s TMT10 1350 (K) TKFTMDLDsDEDFsDFDEK (T) T(0.0)KFT(0.0)MDLDS(0.99)DEDFS(0.99)DFDEK K:TMT10,s:Phosphorylated S TOP2A 178239.3 1 19 71.2 658.36 HUMAN 1 -4.2753 -2.4498 LDSDERPSPEEEEGK-p O15440;S558-p LDSDERPSPEEEEGK 0.131009621387088 0.109632379564687 -0.396666666666667 -0.314333333333333 18.2504806867619 12.6799570745746 -0.396666666666667 -0.314333333333333 0.0149607005857904 0.0539515955034507 -3.513136267294 -2.45224762116735 O15440 ABCC5 O15440.S558.p_ABCC5 O15440_S558s _1_1_558_558 O15440 O15440|O15440-5 Multidrug resistance-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13213.13213.3 14.18 14.18 2.916 2 1 1 0 892.4354 2595.3302 S558s TMT10 547 (K) GHLLLDSDERPsPEEEEGK (H) GHLLLDS(0.0)DERPS(0.99)PEEEEGK K:TMT10,s:Phosphorylated S ABCC5 161741.5 2 6 1666.1 122.51 HUMAN 1 -18.2505 -12.68 LDSDSPLSDYGEEEL-p K7EPW6;S44-p LDSDSPLSDYGEEEL 0.408985042853845 0.66973423584515 0.193333333333333 0.0423333333333333 7.16150549651207 2.37980947701428 0.193333333333333 0.0423333333333333 0.192242519819147 0.578121408768921 1.48925533964983 0.59128864768625 K7EPW6 NotFound K7EPW6.S44.p_NotFound K7EPW6_S44s _1_1_44_44 K7EPW6 K7EPW6|Q8IYS4 Uncharacterized protein C16orf71 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33517.33517.4 22.15 22.15 1.872 5 1 1 0 934.9665 3656.8736 S44s TMT10 29 (K) AVKDQLPSLDSDSPLsDYGEEELFIFQR (N) AVKDQLPS(0.0)LDS(0.0)DS(0.0)PLS(0.99)DY(0.0)GEEELFIFQR K:TMT10,s:Phosphorylated S C16orf71 58142.5 1 1 5173.1 22.15 HUMAN 1 7.1615 2.3798 LDSELSVSPKRNSIS-p Q12802-2;S2732-p LDSELSVSPKRNSIS 0.995647383748077 0.00844515777214221 -0.001 -0.49 0.0356021236308977 29.436821666576 -0.001 -0.49 0.991835817531997 0.00113846014978453 -0.0107136416373839 -6.25292144080487 Q12802 AKAP13 Q12802.2.S2732.p_AKAP13 Q12802-2_S2732s _1_1_2732_2732 Q12802-2 Q12802-2|Q12802-4|A8MYJ1 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17230.17230.3 15.99 15.99 1.367 5 1 1 0 615.321 1763.9791 S2732s TMT10 2722 (K) SGSLDSELSVsPK (R) S(0.0)GS(0.0)LDS(0.0)ELS(0.0)VS(0.99)PK K:TMT10,s:Phosphorylated S AKAP13 310921 7 28 66.1 683.25 HUMAN 1 -0.0356 -29.4368 LDSERRKSDASSLMP-p Q6IQ26;S851-p LDSERRKSDASSLMP 0.922762080209415 0.265302951640361 0.0276666666666667 0.257666666666667 0.684482430286888 7.58859095811297 0.0276666666666667 0.257666666666667 0.85418463866256 0.174237208366413 0.192747206143533 1.56323046828731 Q6IQ26 DENND5A Q6IQ26.S851.p_DENND5A Q6IQ26_S851s _1_1_851_851 Q6IQ26 Q6IQ26 DENN domain-containing protein 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12320.12320.3 8.1 8.1 2.658 3 1 1 0 589.6446 1686.9522 S851s Hydrogen 849 (R) RKsDASSLMPPLR (I) RKS(0.99)DAS(0.0)S(0.0)LMPPLR K:TMT10-Lys-Only,s:Phosphorylated S DENND5A 148633.4 1 3 2138.1 96.07 HUMAN 1 0.6845 7.5886 LDSLNPQSPPPLLAS-p Q9UPV0;S1289-p LDSLNPQSPPPLLAS 0.650350152036488 0.381883214214406 -0.0783333333333333 -0.0843333333333333 3.50448351209309 5.55419782788997 -0.0783333333333333 -0.0843333333333334 0.44622268878702 0.278342944515007 -0.821141260775203 -1.20445143802913 Q9UPV0 CEP164 Q9UPV0.S1289.p_CEP164 Q9UPV0_S1289s_1_1_1289_1289 Q9UPV0 Q9UPV0|Q9UPV0-2 Centrosomal protein of 164 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.37023.37023.5 26.59 28.66 1.316 8 1 1 0 913.0964 4480.4889 N1286n S1289s TMT10 1270 (R) QISSQLSSVLSILDSLnPQsPPPLLASMPAQLPPRDPK (S) QIS(0.0)S(0.0)QLS(0.0)S(0.0)VLS(0.0)ILDS(0.0)LN(1.0)PQS(0.99)PPPLLAS(0.0)MPAQLPPRDPK K:TMT10,n:Deamidated,s:Phosphorylated S CEP164 164824.4 2 6 1433.1 142.71 HUMAN 1 -3.5045 -5.5542 LDSSAPKSPSQDVKA-p Q9UHK0;S403-p LDSSAPKSPSQDVKA 0.141942273574901 0.200790669449127 -0.522 0.163666666666667 17.3324495554861 9.17373597324645 -0.522 0.163666666666667 0.0184822586825898 0.120955717685967 -3.32840313596236 1.8377665748758 Q9UHK0 NUFIP1 Q9UHK0.S403.p_NUFIP1 Q9UHK0_S403s _1_1_403_403 Q9UHK0 Q9UHK0 Nuclear fragile X mental retardation-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20299.20299.5 18.56 18.22 1.121 5 1 1 0 679.9581 3315.7887 S403s TMT10 385 (K) TEADVLAENQVLDSSAPKsPSQDVK (A) T(0.0)EADVLAENQVLDS(0.0)S(0.0)APKS(0.99)PS(0.0)QDVK K:TMT10,s:Phosphorylated S NUFIP1 56698 3 2 3749.1 43.95 HUMAN 1 -17.3324 9.1737 LDTDDEVSPTSWGDS-p Q86US8;S484-p LDTDDEVSPTSWGDS 0.421053324853859 0.337338574819929 -0.139666666666667 -0.150666666666667 6.92133503593101 6.25220071144872 -0.139666666666667 -0.150666666666667 0.203173235353073 0.237017235785295 -1.44723618023415 -1.32904056096637 Q86US8 SMG6 Q86US8.S484.p_SMG6 Q86US8_S484s _1_1_484_484 Q86US8 Q86US8 Telomerase-binding protein EST1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23693.23693.4 21.46 21.46 1.179 7 1 1 0 761.1013 2961.4064 S484s TMT10 469 (K) TQTPQLHFLDTDDEVsPTSWGDSR (Q) T(0.0)QT(0.0)PQLHFLDT(0.0)DDEVS(0.99)PT(0.0)S(0.0)WGDS(0.0)R s:Phosphorylated S SMG6 161600 1 3 1491.1 137.14 HUMAN 1 -6.9213 -6.2522 LDTISQKSVDIHDSI-p Q9Y6D6;S1569-p LDTISQKSVDIHDSI 0.101218422745456 0.023914889486267 -0.603333333333333 0.375333333333333 21.0363514094649 22.1034264958055 -0.603333333333333 0.375333333333333 0.0078770727965702 0.00616108712711576 -4.10497736460927 4.34100213340652 Q9Y6D6 ARFGEF1 Q9Y6D6.S1569.p_ARFGEF1 Q9Y6D6_S1569s _1_1_1569_1569 Q9Y6D6 Q9Y6D6 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11136.11136.3 14.05 14.05 14.049 2 1 1 0 525.9296 1495.8066 S1569s TMT10 1569 (K) sVDIHDSIQPR (S) S(0.99)VDIHDS(0.0)IQPR s:Phosphorylated S ARFGEF1 210988.4 1 14 381.1 335.01 HUMAN 1 -21.0364 22.1034 LDTKEEKSVEYEGDL-p Q12888-2;S814-p LDTKEEKSVEYEGDL 0.167474891729899 0.786601039492639 -0.675333333333333 0.0316666666666667 15.5086058223199 1.44664713075551 -0.675333333333333 0.0316666666666666 0.0281280365529203 0.716696505502763 -2.97439607145151 0.382404397613417 Q12888 TP53BP1 Q12888.2.S814.p_TP53BP1 Q12888-2_S814s _1_1_814_814 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14822.14822.3 11.75 6.04 5.847 2 1 1 0 526.6003 1497.8201 S814s TMT10 814 (K) sVEYEGDLK (S) S(0.99)VEY(0.0)EGDLK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 2 36 3.1 2297.07 HUMAN 1 -15.5086 1.4466 LDTKQLPSPGWSWDS-p O95900;S309-p LDTKQLPSPGWSWDS 0.422807784151987 0.0670672061498654 -0.162 -0.327666666666667 6.88845877657348 15.6083334485861 -0.162 -0.327666666666667 0.204717100748538 0.0274894882587717 -1.44147403828948 -2.99129252708087 O95900 TRUB2 O95900.S309.p_TRUB2 O95900_S309s _1_1_309_309 O95900 O95900|O95900-2 Mitochondrial mRNA pseudouridine synthase TRUB2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28091.28091.3 14.77 14.77 1.774 6 1 1 0 898.7665 2614.3099 S309s TMT10 306 (K) QLPsPGWSWDSQGPSSTLGLER (G) QLPS(0.99)PGWS(0.0)WDS(0.0)QGPS(0.0)S(0.0)T(0.0)LGLER s:Phosphorylated S TRUB2 36979.1 1 2 4914.1 25.13 HUMAN 1 -6.8885 -15.6083 LDTPGIISPGKQKRH-p O75616;S173-p LDTPGIISPGKQKRH 0.830935953705249 0.0178902822060658 0.03 0.331 1.54754445778614 24.0626948052772 0.03 0.331 0.700237805194686 0.0039240137406531 0.406095645885481 4.80453076825541 O75616 ERAL1 O75616.S173.p_ERAL1 O75616_S173s _1_1_173_173 O75616 O75616|O75616-2 GTPase Era, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29883.29883.3 19.63 19.16 1.684 3 1 1 0 773.7722 2239.3314 S173s TMT10 160 (K) ETQVILLDTPGIIsPGK (Q) ET(0.0)QVILLDT(0.0)PGIIS(0.99)PGK K:TMT10,s:Phosphorylated S ERAL1 48862.7 2 1 5402.1 19.63 HUMAN 1 1.5475 24.0627 LDVEEPDSANSSFYS-p Q14980;S1830-p LDVEEPDSANSSFYS 0.228515015675621 0.0732070129983996 0.178333333333333 -0.266 12.3208300484702 15.0788742354984 0.178333333333333 -0.266 0.0586026149138172 0.031053644466159 2.38937359004383 -2.89135831910606 Q14980 NUMA1 Q14980.S1830.p_NUMA1 Q14980_S1830s _1_1_1830_1830 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16279.16279.3 21.45 19.49 2.184 6 1 1 0 861.7513 2503.2717 S1830s TMT10 1822 (K) KLDVEEPDsANSSFYSTR (S) KLDVEEPDS(0.99)ANS(0.0)S(0.0)FY(0.0)S(0.0)T(0.0)R K:TMT10,s:Phosphorylated S NUMA1 239339.3 2 23 31.1 900.97 HUMAN 1 12.3208 -15.0789 LDVTNSESPEIPLNP-p Q14244-7;S736-p LDVTNSESPEIPLNP 0.731998168448742 0.591938614870261 0.0566666666666666 -0.171333333333333 2.56901092540641 3.08211464305062 0.0566666666666667 -0.171333333333333 0.553476145093296 0.491800012787461 0.631426626015903 -0.736936855378314 Q14244 MAP7 Q14244.7.S736.p_MAP7 Q14244-7_S736s _1_1_736_736 Q14244-7 A0A087WZ40|Q14244-7|Q14244-4|Q14244-6|Q14244-2|Q14244-3|Q14244-5 Isoform 7 of Ensconsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37761.37761.4 19.32 15.54 2.395 6 1 1 0 1218.1122 4789.4509 S736s TMT10 729 (R) LDVTNSEsPEIPLNPILAFDDEGTLGPLPQVDGVQTQQTAEVI (-) LDVT(0.0)NS(0.0)ES(0.99)PEIPLNPILAFDDEGT(0.0)LGPLPQVDGVQT(0.0)QQT(0.0)AEVI s:Phosphorylated S MAP7 87064.8 7 15 581.1 266.4 HUMAN 1 2.569 -3.0821 LEAASHLSPENFVED-p J3QSE8;S930-p LEAASHLSPENFVED 0.670171441411796 0.0102881940436151 -0.058 -0.485333333333333 3.25513107768848 27.9116405257602 -0.058 -0.485333333333333 0.472592573010705 0.00161746893140178 -0.771772579603895 -5.8126752167609 J3QSE8 NotFound J3QSE8.S930.p_NotFound J3QSE8_S930s _1_1_930_930 J3QSE8 J3QSE8 Fanconi anemia group J protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29899.29899.3 24.05 24.05 1.147 7 1 1 0 1112.5382 3255.6462 S930s TMT10 916 (K) YSTSPYLLEAASHLsPENFVEDEAK (I) Y(0.0)S(0.0)T(0.0)S(0.0)PY(0.0)LLEAAS(0.0)HLS(0.99)PENFVEDEAK K:TMT10,s:Phosphorylated S BRIP1 114176 2 1 837.2 214.97 HUMAN 1 -3.2551 -27.9116 LEADQNDSQSLELVH-p Q13572;S72-p LEADQNDSQSLELVH 0.259555107566137 0.109017583404082 0.167 0.267333333333333 11.112747602724 12.7157802319384 0.167 0.267333333333333 0.0773971982607019 0.0535084014593926 2.1758736225581 2.45866209888763 Q13572 ITPK1 Q13572.S72.p_ITPK1 Q13572_S72s _1_1_72_72 Q13572 Q13572|Q13572-2 Inositol-tetrakisphosphate 1-kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27062.27062.4 18.51 14.78 2.222 3 1 1 0 676.8412 2624.3729 S72s TMT10 60 (K) LTDVILEADQNDsQSLELVHR (F) LT(0.0)DVILEADQNDS(0.99)QS(0.0)LELVHR s:Phosphorylated S ITPK1 46190.8 3 1 2511.1 80.49 HUMAN 1 11.1127 12.7158 LEAKCLASPSLNPGN-p Q8TD26;S1812-p LEAKCLASPSLNPGN 0.693940595790396 0.621323322524952 0.0786666666666667 0.048 2.97672189402045 2.81035909296373 0.0786666666666667 0.048 0.503880800455327 0.523557144886813 0.715680274874709 0.681531420792788 Q8TD26 CHD6 Q8TD26.S1812.p_CHD6 Q8TD26_S1812s _1_1_1812_1812 Q8TD26 Q8TD26 Chromodomain-helicase-DNA-binding protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24781.24781.3 14.41 14.41 1.191 6 1 1 0 1209.2245 3545.6897 S1812s TMT10 1809 (K) CLAsPSLNPGNESGFVDMCSLSVCDSKR (N) CLAS(0.99)PS(0.0)LNPGNES(0.0)GFVDMCS(0.0)LS(0.0)VCDS(0.0)KR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CHD6 308259.4 6 7 1006.1 189.22 HUMAN 1 2.9767 2.8104 LEALPQLSSGADKKL-p Q96KP1;S888-p LEALPQLSSGADKKL 0.446807749322286 0.396017106370746 -0.140666666666667 0.0946666666666667 6.45450017474947 5.34827713342346 -0.140666666666667 0.0946666666666667 0.226229889054327 0.291858460057412 -1.36514613962352 1.16726594118463 Q96KP1 EXOC2 Q96KP1.S888.p_EXOC2 Q96KP1_S888s _1_1_888_888 Q96KP1 Q96KP1 Exocyst complex component 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20524.20524.4 15.31 14.52 1.275 2 1 1 0 606.5942 2343.3851 S888s TMT10 879 (K) QALEALPQLsSGADKK (L) QALEALPQLS(0.99)S(0.0)GADKK K:TMT10,s:Phosphorylated S EXOC2 105148.4 2 5 2640.1 75.63 HUMAN 1 -6.4545 5.3483 LEAPAPGSPFRVRRV-p Q9NQT8;S1644-p LEAPAPGSPFRVRRV 0.7281095523922 0.518034411714254 0.0493333333333333 0.0693333333333333 2.61533472849081 3.83709667309725 0.0493333333333333 0.0693333333333334 0.547603893267262 0.41332372305904 0.641137698802072 0.885713977512987 Q9NQT8 KIF13B Q9NQT8.S1644.p_KIF13B Q9NQT8_S1644s _1_1_1644_1644 Q9NQT8 Q9NQT8|Q9NQT8-2 Kinesin-like protein KIF13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14524.14524.3 16.12 16.12 99 1 1 1 0 649.9895 1867.9864 S1644s TMT10 1633 (R) ERPDLEAPAPGsPFR (V) ERPDLEAPAPGS(1.0)PFR s:Phosphorylated S KIF13B 204097.3 5 13 335.1 355.82 HUMAN 1 2.6153 3.8371 LEASQQNSEEM____-p Q4VC05-2;S228-p LEASQQNSEEM____ 0.867004984935891 0.0140269711631178 0.0253333333333333 0.403333333333333 1.20776573271849 25.7054215872203 0.0253333333333333 0.403333333333333 0.757222354727839 0.00268817687819541 0.325211902582411 5.21793239154649 Q4VC05 BCL7A Q4VC05.2.S228.p_BCL7A Q4VC05-2_S228s _1_1_228_228 Q4VC05-2 Q4VC05-2 Isoform 2 of B-cell CLL/lymphoma 7 protein family member A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15178.15178.2 12.56 12.56 12.555 2 1 1 0 1031.984 1982.9927 S228s TMT10 219 (K) MKLEASQQNsEEM (-) MKLEAS(0.0)QQNS(0.99)EEM K:TMT10,s:Phosphorylated S BCL7A 25086 3 2 3948.1 40.36 HUMAN 1 1.2078 25.7054 LEASYSDSPPGEEDL-p Q7Z3C6;S18-p LEASYSDSPPGEEDL 0.994598725148645 0.737804219931673 -0.00166666666666669 0.0696666666666667 0.047441161469974 1.82096764195634 -0.00166666666666668 0.0696666666666666 0.989135716172296 0.657511322386152 -0.0142571626400761 0.46872591237831 Q7Z3C6 ATG9A Q7Z3C6.S18.p_ATG9A Q7Z3C6_S18s _1_1_18_18 Q7Z3C6 Q7Z3C6|Q7Z3C6-3|F2Z3I6 Autophagy-related protein 9A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26604.26604.3 19.71 19.71 2.309 5 1 1 0 1023.1757 2987.525 S18s TMT10 11 (R) LEASYSDsPPGEEDLLVHVAEGSK (S) LEAS(0.0)Y(0.0)S(0.0)DS(0.99)PPGEEDLLVHVAEGS(0.0)K K:TMT10,s:Phosphorylated S ATG9A 95415.3 1 1 1664.1 122.57 HUMAN 1 -0.0474 1.821 LEAVTARSFEEEGEH-p Q9BXW6;S499-p LEAVTARSFEEEGEH 0.0511487796737011 0.0439711539603473 -0.543333333333333 -0.242 28.3806737139101 18.1688917731415 -0.543333333333334 -0.242 0.00145188637136454 0.0152444170916792 -5.95417459404446 -3.49363266276868 Q9BXW6 OSBPL1A Q9BXW6.S499.p_OSBPL1A Q9BXW6_S499s _1_1_499_499 Q9BXW6 Q9BXW6|Q9BXW6-4 Oxysterol-binding protein-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5980.5980.2 23.38 23.38 23.379 2 1 1 0 728.7911 1376.6077 S499s Hydrogen 499 (R) sFEEEGEHLGSR (K) S(0.99)FEEEGEHLGS(0.0)R s:Phosphorylated S OSBPL1A 109837.2 9 3 1553.1 132.3 HUMAN 1 -28.3807 -18.1689 LECLTRHSYRECLGR-p Q8TDY2;S212-p LECLTRHSYRECLGR 0.164616537021326 0.00825855451434813 0.423 0.779666666666667 15.6911352528325 29.6332074699969 0.423 0.779666666666667 0.0269703433113506 0.00108812616390304 3.00910714523809 6.31145438137305 Q8TDY2 RB1CC1 Q8TDY2.S212.p_RB1CC1 Q8TDY2_S212s _1_1_212_212 Q8TDY2 Q8TDY2|Q8TDY2-2 RB1-inducible coiled-coil protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4390.4390.3 8.43 8.43 8.427 2 1 1 0 496.2326 1406.716 S212s TMT10 211 (R) HsYRECLGR (L) HS(0.99)Y(0.0)RECLGR C:Carbamidomethylation,s:Phosphorylated S RB1CC1 185198.6 2 1 707.1 238.96 HUMAN 1 15.6911 29.6332 LEDDLEMSSDASDAS-p P35269;S217-p LEDDLEMSSDASDAS 0.683208662620214 0.00855566836817945 0.056 0.511666666666667 3.10127749462889 29.3335889187304 0.056 0.511666666666667 0.489634770152627 0.00116584578830554 0.740908889348689 6.22232570453926 P35269 GTF2F1 P35269.S217.p_GTF2F1 P35269_S217sS218sS221s_3_3_217_221 P35269 P35269 General transcription factor IIF subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19834.20605.4 21.25 21.25 2.321 4 3 3 0 894.1264 3317.5844 M216m S217s S218s S221s TMT10 207 (R) IHDLEDDLEmssDAsDASGEEGGRVPK (A) IHDLEDDLEM(1.0)S(0.99)S(0.99)DAS(0.99)DAS(0.0)GEEGGRVPK K:TMT10,m:Oxidized methionine,s:Phosphorylated S GTF2F1 58296.5 10 17 1159.1 171.17 HUMAN 1 3.1013 29.3336 LEDDSEESDAEFDEG-p Q03468;S489-p LEDDSEESDAEFDEG 0.31256981829013 0.0227741938685918 -0.201333333333333 0.438666666666667 9.44928137467122 22.4247150823852 -0.201333333333333 0.438666666666667 0.113519864099378 0.00572174490759868 -1.88616900560097 4.41494713789691 Q03468 ERCC6 Q03468.S489.p_ERCC6 Q03468_S486sS489s_2_2_486_489 Q03468 Q03468 DNA excision repair protein ERCC-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35860.35860.5 13.87 13.87 99 2 2 2 0 814.4043 3908.0663 S486s S489s TMT10 480 (R) LKLEDDsEEsDAEFDEGFKVPGFLFK (K) LKLEDDS(1.0)EES(1.0)DAEFDEGFKVPGFLFK K:TMT10,s:Phosphorylated S ERCC6 169554.2 8 14 403.1 327.23 HUMAN 1 -9.4493 22.4247 LEDKKELSEESEDEE-p Q99543;S60-p LEDKKELSEESEDEE 0.421705715226984 0.0110966201982267 -0.159 0.433333333333333 6.90761214295028 27.3748441704151 -0.159 0.433333333333333 0.203816240111577 0.00183027177727544 -1.44483131950439 5.66354724911959 Q99543 DNAJC2 Q99543.S60.p_DNAJC2 Q99543_S60s _1_1_60_60 Q99543 Q99543|Q99543-2 DnaJ homolog subfamily C member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33001.33001.3 13.53 13.53 1.128 2 1 1 0 988.1359 2882.4269 S60s TMT10 58 (K) ELsEESEDEELQLEEFPMLK (T) ELS(0.99)EES(0.0)EDEELQLEEFPMLK K:TMT10,s:Phosphorylated S DNAJC2 72508.6 1 3 2137.1 96.08 HUMAN 1 -6.9076 27.3748 LEDPAPMTPPPSDMG-p Q96A73;T44-p LEDPAPMTPPPSDMG 0.648120240178882 0.128593993834322 -0.089 -0.160333333333333 3.52917387249241 11.7467449236488 -0.0890000000000001 -0.160333333333333 0.443693036475438 0.0668845035141438 -0.825988282633719 -2.28638052167628 Q96A73 KIAA1191 Q96A73.T44.p_KIAA1191 Q96A73_T44t _1_1_44_44 Q96A73 Q96A73|Q96A73-2 Putative monooxygenase p33MONOX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27051.27051.5 26.1 23.11 7.539 6 1 1 0 898.8598 4410.2969 T44t TMT10 30 (R) AVSYDDTLEDPAPMtPPPSDMGSVPWKPVIPERK (Y) AVS(0.0)Y(0.0)DDT(0.0)LEDPAPMT(0.99)PPPS(0.0)DMGS(0.0)VPWKPVIPERK K:TMT10,t:Phosphorylated T KIAA1191 33246.1 4 1 2546.1 79.06 HUMAN 1 -3.5292 -11.7467 LEDQQDPSPSS____-p B5MBZ0;S989-p LEDQQDPSPSS____ 0.509657942081354 0.243175141943122 0.104333333333333 0.115333333333333 5.40579369827926 8.08906234326495 0.104333333333333 0.116378525280794 0.288018663091165 0.155272221184124 1.17792949465332 1.65007794701556 B5MBZ0 EML4 B5MBZ0.S989.p_EML4 B5MBZ0_S989s _1_1_989_989 B5MBZ0 B5MBZ0 Echinoderm microtubule-associated protein-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17672.17672.2 10.72 10.72 1.491 4 1 1 0 898.9121 1716.8489 S989s TMT10 979 (K) ATLLEDQQDPsPSS (-) AT(0.0)LLEDQQDPS(0.99)PS(0.0)S(0.0) s:Phosphorylated S EML4 111259.7 1 11 586.1 265.11 HUMAN 1 5.4058 8.0891 LEDSEESSEETVSRA-p O60231;S107-p LEDSEESSEETVSRA 0.309869250687191 0.342568514744343 -0.22 0.119 9.51291890029329 6.16229641461944 -0.22 0.119 0.111868576022057 0.241974922000738 -1.89719729385308 1.31310391885113 O60231 DHX16 O60231.S107.p_DHX16 O60231_S103sS106sS107s_3_3_103_107 O60231 O60231 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20611.20813.2 10.88 10.88 4.093 5 3 3 0 1089.921 1938.9341 S103s S106s S107s TMT10 99 (R) LLEDsEEssEETVSR (A) LLEDS(0.99)EES(0.99)S(0.99)EET(0.0)VS(0.0)R s:Phosphorylated S DHX16 119946.1 2 7 2216.1 93.19 HUMAN 1 -9.5129 6.1623 LEDSEVRSVASNQSE-p Q8N163;S675-p LEDSEVRSVASNQSE 0.744118013547764 0.00627461445367574 0.0516666666666667 0.584 2.43646327254887 31.7203423329901 0.0516666666666667 0.584 0.570628781277952 0.000672923610933554 0.603428440228461 6.96122924615771 Q8N163 CCAR2 Q8N163.S675.p_CCAR2 Q8N163_S675s _1_1_675_675 Q8N163 Q8N163|Q8N163-2|G3V119|A0A087X2B6 Cell cycle and apoptosis regulator protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22618.22618.3 9.4 6.48 1.545 5 1 1 0 808.6938 2344.0998 S675s Hydrogen 675 (R) sVASNQSEMEFSSLQDMPK (E) S(0.99)VAS(0.0)NQS(0.0)EMEFS(0.0)S(0.0)LQDMPK K:TMT10-Lys-Only,s:Phosphorylated S CCAR2 103527.3 6 5 891.1 204.52 HUMAN 1 2.4365 31.7203 LEDSPPVSDSEEQQE-p Q9BTC0;S809-p LEDSPPVSDSEEQQE 0.731450287132575 0.80069574466481 -0.0806666666666667 0.0493333333333333 2.57728189142743 1.35010895405776 -0.0806666666666667 0.0493333333333334 0.552423074827938 0.73280614856155 -0.633163258271118 0.359494718107044 Q9BTC0 DIDO1 Q9BTC0.S809.p_DIDO1 Q9BTC0_S809s _1_1_809_809 Q9BTC0 Q9BTC0|Q9BTC0-1 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18460.18460.3 25.46 24.05 1.962 4 1 1 0 989.1132 2885.3486 S809s TMT10 796 (R) QEAIPDLEDSPPVsDSEEQQESAR (A) QEAIPDLEDS(0.0)PPVS(0.99)DS(0.0)EEQQES(0.0)AR s:Phosphorylated S DIDO1 245579.9 3 7 153.1 505.54 HUMAN 1 -2.5773 1.3501 LEDTLFPSSKKLKKD-p Q96JM3;S615-p LEDTLFPSSKKLKKD 0.996392226220518 0.0296958329560709 -0.00100000000000001 -0.349333333333333 0.0301780178128548 20.6711898564895 -0.00100000000000002 -0.349333333333333 0.993075341312993 0.00856803070807937 -0.00908698943084539 -4.02057417195856 Q96JM3 CHAMP1 Q96JM3.S615.p_CHAMP1 Q96JM3_S615s _1_1_615_615 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29899.29899.2 13.93 13.93 1.265 3 1 1 0 894.4834 1707.9933 S615s TMT10 607 (K) LLEDTLFPsSK (K) LLEDT(0.0)LFPS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S CHAMP1 90067.4 2 33 25.1 950.05 HUMAN 1 -0.0302 -20.6712 LEEALQDSPQTRSLL-p Q8NEU8;S16-p LEEALQDSPQTRSLL 0.34577429659907 0.514605630493757 0.382 -0.0883333333333333 8.56885229264628 3.8718310915894 0.382 -0.0883333333333333 0.139032000167977 0.410031187374984 1.73372808677088 -0.892401730879822 Q8NEU8 APPL2 Q8NEU8.S16.p_APPL2 Q8NEU8_S16s _1_1_16_16 Q8NEU8 Q8NEU8-3|F8VXB0 DCC-interacting protein 13-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26617.26617.3 13.78 13.78 2.718 2 1 1 0 641.3332 1842.017 S16s TMT10 7 (K) LLLEEALQDsPQTR (S) LLLEEALQDS(0.99)PQT(0.0)R s:Phosphorylated S APPL2 75005.5 1 1 4411.1 31.85 HUMAN 1 8.5689 -3.8718 LEEASAESEDEMIHP-p Q9UKV3;S169-p LEEASAESEDEMIHP 0.2734486714236 0.0535109807374126 0.156333333333333 0.239 10.6609283665427 16.9550026634485 0.156163489641871 0.239 0.0858829914709523 0.0201604273426192 2.09680749163024 3.25130816736761 Q9UKV3 ACIN1 Q9UKV3.S169.p_ACIN1 Q9UKV3_S166sS169s_2_2_166_169 Q9UKV3 Q9UKV3|Q9UKV3-5|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34036.34036.5 26.37 19.72 5.984 6 2 2 0 1026.072 4966.3989 S166s S169s TMT10 158 (R) EAAELEEAsAEsEDEMIHPEGVASLLPPDFQSSLERPELELSR (H) EAAELEEAS(0.99)AES(0.99)EDEMIHPEGVAS(0.0)LLPPDFQS(0.0)S(0.0)LERPELELS(0.0)R s:Phosphorylated S ACIN1 152258.2 6 41 32.2 899.18 HUMAN 1 10.6609 16.955 LEEDFRRSPTEDFRQ-p Q8IXT5;S638-p LEEDFRRSPTEDFRQ 0.408985042853845 0.204279871594527 0.119333333333333 0.128 7.16119361017999 9.0736069648731 0.119333333333333 0.128 0.192256326111846 0.123776815054151 1.48920085376978 1.82044477612594 Q8IXT5 RBM12B Q8IXT5.S638.p_RBM12B Q8IXT5_S638s _1_1_638_638 Q8IXT5 Q8IXT5 RNA-binding protein 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17935.17935.3 20.43 14.52 2.107 2 1 1 0 970.7709 2830.3278 S638s Hydrogen 638 (R) sPTEDFRQLPEEDFRQPPEEDLR (W) S(0.99)PT(0.0)EDFRQLPEEDFRQPPEEDLR s:Phosphorylated S RBM12B 118442.9 16 9 384.1 333.8 HUMAN 1 7.1612 9.0736 LEEDRAQTPHEDGGP-p Q9BRZ2;T442-p LEEDRAQTPHEDGGP 0.197106685312413 0.584464991269668 -0.341333333333333 0.0956666666666667 13.7478760081364 3.15004459315741 -0.341333333333333 0.0956666666666667 0.0421902791797209 0.484167396150049 -2.64674368304962 0.750618291081941 Q9BRZ2 TRIM56 Q9BRZ2.T442.p_TRIM56 Q9BRZ2_T442t _1_1_442_442 Q9BRZ2 Q9BRZ2 E3 ubiquitin-protein ligase TRIM56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5592.5592.4 22.49 17.13 2.886 2 1 1 0 774.1021 3013.4197 T442t TMT10 429 (R) EEGAQTLEEDRAQtPHEDGGPQPHR (G) EEGAQT(0.0)LEEDRAQT(0.99)PHEDGGPQPHR t:Phosphorylated T TRIM56 83197.9 3 3 1098.1 178.07 HUMAN 1 -13.7479 3.15 LEEEDKASEVAIEEE-p Q5QJE6;S512-p LEEEDKASEVAIEEE 0.889344413598258 0.742197460218764 0.1 0.298 0.994228952393452 1.78424646930294 0.1 0.298 0.795384465773442 0.663094389112174 0.272430193789355 0.460422000542805 Q5QJE6 DNTTIP2 Q5QJE6.S512.p_DNTTIP2 Q5QJE6_S512s _1_1_512_512 Q5QJE6 Q5QJE6|J3KP30 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22099.22099.4 20.01 17.69 20.009 2 1 1 0 760.6325 2959.5391 S512s TMT10 502 (K) NFYLEEEDKAsEVAIEEEK (E) NFY(0.0)LEEEDKAS(0.99)EVAIEEEK K:TMT10,s:Phosphorylated S DNTTIP2 84866.9 1 17 448.1 309.47 HUMAN 1 0.9942 1.7842 LEEEEENSDEDELDS-p Q13188-2;S344-p LEEEEENSDEDELDS 0.993942067730715 0.237071382283059 -0.00133333333333333 0.186 0.0528541523073024 8.2339495563245 -0.00133333333333333 0.186 0.98790363805825 0.150177560169201 -0.0158741672666242 1.67517465363702 Q13188 STK3 Q13188.2.S344.p_STK3 Q13188-2_S344s _1_1_344_344 Q13188-2 Q13188-2|A0A087WZ06 Isoform 2 of Serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10950.10950.5 29.43 29.43 8.623 3 1 1 0 725.5079 3543.5503 S344s Hydrogen 330 (R) HEEQQRELEEEEENsDEDELDSHTMVK (T) HEEQQRELEEEEENS(0.99)DEDELDS(0.0)HT(0.0)MVK K:TMT10-Lys-Only,s:Phosphorylated S STK3 59803 15 6 1088.1 179.29 HUMAN 1 -0.0529 8.2339 LEEENPNSPQEELHP-p Q9BVV6-3;S1219-p LEEENPNSPQEELHP 0.736579803240874 0.226627525607591 0.061 -0.119333333333333 2.51675245149228 8.49036125319906 0.061 -0.119333333333333 0.560176331153648 0.141567601683043 0.620426002134726 -1.71955690478572 Q9BVV6 KIAA0586 Q9BVV6.3.S1219.p_KIAA0586 Q9BVV6-3_S1219s_1_1_1219_1219 Q9BVV6-3 Q9BVV6-3|Q9BVV6-4|Q9BVV6-2|A0A087WYM5 Isoform 3 of Protein TALPID3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24624.24624.4 24.61 24.61 1.246 3 1 1 0 1033.7621 4051.0449 N1216n S1219s TMT10 1196 (K) VSSPELPKPWGDGDLPLEEEnPNsPQEELHPR (A) VS(0.0)S(0.0)PELPKPWGDGDLPLEEEN(0.99)PN(0.0)S(0.99)PQEELHPR K:TMT10,n:Deamidated,s:Phosphorylated S KIAA0586 183368.4 1 9 1314.1 155.12 HUMAN 1 2.5168 -8.4904 LEEGEIRSDSETSKP-p Q9UKL3;S940-p LEEGEIRSDSETSKP 0.227820998051172 0.00501629487839549 -0.227666666666667 -0.595 12.351384133876 33.5299370484469 -0.227666666666667 -0.595 0.0581917726028029 0.000443615074143344 -2.39481992109584 -7.56839086698677 Q9UKL3 CASP8AP2 Q9UKL3.S940.p_CASP8AP2 Q9UKL3_S940s _1_1_940_940 Q9UKL3 Q9UKL3|A0A087WTW5 CASP8-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20816.20816.5 23.87 18.59 1.144 6 1 1 0 770.3841 3767.9066 S940s TMT10 927 (K) NSPLDELEEGEIRsDSETSKPQESFEK (N) NS(0.0)PLDELEEGEIRS(0.99)DS(0.0)ET(0.0)S(0.0)KPQES(0.0)FEK K:TMT10,s:Phosphorylated S CASP8AP2 224993 3 5 740.1 234.21 HUMAN 1 -12.3514 -33.5299 LEEIPPASPEMAQMR-p Q96L91;S358-p LEEIPPASPEMAQMR 0.421053324853859 0.414357681862879 0.126666666666667 0.095 6.92065083806666 5.089814327911 0.126666666666667 0.095 0.203205246269658 0.309755172470885 1.4471162890567 1.12026198117865 Q96L91 EP400 Q96L91.S358.p_EP400 Q96L91_S358s _1_1_358_358 Q96L91 Q96L91|Q96L91-2|Q96L91-5|Q96L91-3|Q96L91-4|A0A0A0MR80|Q6ZTU2|Q6ZTU2-6|Q6ZTU2-2|Q6ZTU2-5|Q6ZTU2-4 E1A-binding protein p400 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17821.18024.3 16.18 14.01 99 1 1 1 0 789.0736 2285.2398 S358s TMT10 350 (K) KLEEIPPAsPEMAQMR (K) KLEEIPPAS(1.0)PEMAQMR K:TMT10,s:Phosphorylated S EP400 344909.2 4 12 91.1 620.97 HUMAN 1 6.9207 5.0898 LEEKASASPGENDSG-p Q15911;S2625-p LEEKASASPGENDSG 0.336172963233061 0.390354782508678 0.321666666666667 -0.140333333333333 8.82851165848082 5.43244078681508 0.321666666666667 -0.140333333333333 0.130963066085169 0.286256871995886 1.77867790355611 -1.18249113043053 Q15911 ZFHX3 Q15911.S2625.p_ZFHX3 Q15911_S2625s _1_1_2625_2625 Q15911 Q15911|Q15911-2 Zinc finger homeobox protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4633.4633.4 13.11 13.11 1.205 4 1 1 0 696.5821 2703.3334 S2625s TMT10 2622 (K) ASAsPGENDSGTGGEEPQRDKR (L) AS(0.0)AS(0.99)PGENDS(0.0)GT(0.0)GGEEPQRDKR K:TMT10,s:Phosphorylated S ZFHX3 409090.1 1 10 529.1 281.73 HUMAN 1 8.8285 -5.4324 LEEKMESSFGSPSKQ-p Q6VMQ6-4;S482-p LEEKMESSFGSPSKQ 0.952809813911717 0.00256376979859587 0.0103333333333333 -0.713333333333333 0.414128508316849 39.5922619044663 0.0103333333333333 -0.713333333333333 0.909048698089913 0.00010984336012186 0.119687731822611 -9.94946750630485 Q6VMQ6 ATF7IP Q6VMQ6.4.S482.p_ATF7IP Q6VMQ6-4_S482sS485s_2_2_482_485 Q6VMQ6-4 Q6VMQ6-4 Isoform 3 of Activating transcription factor 7-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18081.18081.3 12.45 6.22 1.102 7 2 2 0 963.7912 2729.4271 S482s S485s TMT10 479 (K) MESsFGsPSKQESSESLPK (E) MES(0.0)S(0.99)FGS(0.99)PS(0.0)KQES(0.0)S(0.0)ES(0.0)LPK K:TMT10,s:Phosphorylated S ATF7IP 138346.3 9 18 273.1 392.91 HUMAN 1 0.4141 -39.5923 LEEPGAGTPSPVRLH-p Q96P11-2;T325-p LEEPGAGTPSPVRLH 0.356747125335107 0.0350140124115362 0.305333333333333 -0.266666666666667 8.32399604652957 19.601604869747 0.305333333333333 -0.266666666666667 0.147095841583954 0.010960730840217 1.69132377324586 -3.79051024260497 Q96P11 NSUN5 Q96P11.2.T325.p_NSUN5 Q96P11-2_T325t _1_1_325_325 Q96P11-2 Q96P11-4|Q96P11-2|Q96P11-5|Q63ZY6|Q63ZY6-5|Q63ZY6-4 Isoform 2 of Probable 28S rRNA (cytosine-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18361.18361.4 18.93 18.93 1.108 2 1 1 0 717.8731 2788.5056 T325t TMT10 317 (R) QLEEPGAGtPSPVRLHALAGFQQR (A) QLEEPGAGT(0.99)PS(0.0)PVRLHALAGFQQR t:Phosphorylated T NSUN5 51151.8 5 2 2119.1 96.89 HUMAN 1 8.324 -19.6016 LEERGRLTPSDMPLL-p Q9H1I8;T233-p LEERGRLTPSDMPLL 0.414011089361917 0.01645974811332 -0.323 0.721333333333333 7.06568428883336 24.6317644648775 -0.323 0.721333333333334 0.196531229504026 0.0034421005563874 -1.47250607304862 4.94506066258541 Q9H1I8 ASCC2 Q9H1I8.T233.p_ASCC2 Q9H1I8_T233t _1_1_233_233 Q9H1I8 Q9H1I8|Q9H1I8-3|Q9H1I8-2 Activating signal cointegrator 1 complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27808.27808.3 16.35 16.35 1.648 2 1 1 0 703.3916 2028.1928 T233t TMT10 230 (R) GRLtPSDMPLLELK (D) GRLT(0.99)PS(0.0)DMPLLELK K:TMT10,t:Phosphorylated T ASCC2 87100.5 2 1 4824.1 26.23 HUMAN 1 -7.0657 24.6318 LEERKVISPPPFAPS-p Q5TC82;S772-p LEERKVISPPPFAPS 0.686404096983296 0.114920292792068 0.0573333333333333 0.171 3.06641178076708 12.3953216927154 0.0573333333333334 0.171 0.493581441410134 0.0576060146772839 0.733869299051433 2.40141142265459 Q5TC82 RC3H1 Q5TC82.S772.p_RC3H1 Q5TC82_S772s _1_1_772_772 Q5TC82 Q5TC82|Q5TC82-2 Roquin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32592.32798.4 20.59 20.59 4.545 4 1 1 0 1004.0387 3933.1657 S772s TMT10 769 (R) KVIsPPPFAPSPTLPPTFHPEEFLDEDLK (V) KVIS(0.99)PPPFAPS(0.0)PT(0.0)LPPT(0.0)FHPEEFLDEDLK K:TMT10,s:Phosphorylated S RC3H1 126704 6 2 2236.1 92.29 HUMAN 1 3.0664 12.3953 LEESVSMSPEERARY-p P15374;S130-p LEESVSMSPEERARY 0.640849622277516 0.811145454882994 0.0636666666666667 0.032 3.60834890925461 1.27441242513302 0.0636666666666667 0.032 0.435677477062669 0.74569075277229 0.841483460970793 0.341327853291493 P15374 UCHL3 P15374.S130.p_UCHL3 P15374_S130s _1_1_130_130 P15374 P15374|A0A087WTB8 Ubiquitin carboxyl-terminal hydrolase isozyme L3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21442.21442.2 17.88 16.99 1.272 3 1 1 0 924.9172 1768.8625 S130s TMT10 122 (K) FLEESVSMsPEER (A) FLEES(0.0)VS(0.0)MS(0.99)PEER s:Phosphorylated S UCHL3 26353.3 10 2 3001.1 63.55 HUMAN 1 3.6083 1.2744 LEEVRRESPIEGQRS-p A0A0U1RQD2;S480-p LEEVRRESPIEGQRS 0.79813572883131 0.377990385064782 0.0476666666666667 0.112333333333333 1.88976139503974 5.61235579604018 0.0476666666666667 0.112333333333333 0.647178171272857 0.2746403983872 0.484248105179221 1.21491463899672 A0A0U1RQD2 NotFound A0A0U1RQD2.S480.p_NotFound A0A0U1RQD2_S480s _1_1_480_480 A0A0U1RQD2 A0A0U1RQD2|Q6ZUS6-4|Q6ZUS6-5 Coiled-coil domain-containing protein 149 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12517.12517.4 15.77 10.05 99 1 1 1 0 652.3254 2526.311 S480s TMT10 467 (K) EQAAAELEEVRREsPIEGQR (S) EQAAAELEEVRRES(1.0)PIEGQR s:Phosphorylated S CCDC149 60809.1 1 3 4721.1 27.48 HUMAN 1 1.8898 5.6124 LEEWTSRSPRQRSSA-p Q96G74;S452-p LEEWTSRSPRQRSSA 0.947878026570709 0.0497180785480239 -0.01 0.239333333333333 0.461978630887345 17.4300817369253 -0.01 0.239333333333333 0.899087866830863 0.0180714011418886 -0.132882773997965 3.34519904020553 Q96G74 OTUD5 Q96G74.S452.p_OTUD5 Q96G74_S452s _1_1_452_452 Q96G74 Q96G74|Q96G74-5|Q96G74-3|Q96G74-2|A0A087WXV6|Q96G74-4 OTU domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15091.15091.3 15.51 10.92 1.116 10 1 1 0 1069.8552 3127.5842 S452s TMT10 429 (R) KASATCSSATAAASSGLEEWTSRsPR (Q) KAS(0.0)AT(0.0)CS(0.0)S(0.0)AT(0.0)AAAS(0.0)S(0.0)GLEEWT(0.0)S(0.0)RS(0.99)PR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S OTUD5 61138.2 4 4 946.1 197.26 HUMAN 1 -0.462 17.4301 LEFETLKTPDIDVPK-p Q5JSH3;T271-p LEFETLKTPDIDVPK 0.175358480804402 0.00437637139346334 -0.291 -0.602666666666667 15.050150660531 34.6615725422775 -0.291 -0.602666666666667 0.0312597092259431 0.000341855637168866 -2.88786227371521 -7.97045396358605 Q5JSH3 WDR44 Q5JSH3.T271.p_WDR44 Q5JSH3_T271t _1_1_271_271 Q5JSH3 Q5JSH3|Q5JSH3-2|Q5JSH3-4 WD repeat-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22897.22897.4 16.11 11.27 2.27 3 1 1 0 772.187 3005.7581 T271t TMT10 261 (R) KSELEFETLKtPDIDVPK (E) KS(0.0)ELEFET(0.0)LKT(0.99)PDIDVPK K:TMT10,t:Phosphorylated T WDR44 101935 4 10 95.1 607.92 HUMAN 1 -15.0502 -34.6616 LEFQQKLSAEERWLG-p Q9BQS8-4;S1165-p LEFQQKLSAEERWLG 0.0217780195589434 0.00987532593183393 -0.719333333333333 -0.451666666666667 38.7458731933345 28.2113117614123 -0.718732347963543 -0.451666666666667 0.000133478918960553 0.00150962411204664 -9.60261674755055 -5.8972178617285 Q9BQS8 FYCO1 Q9BQS8.4.S1165.p_FYCO1 Q9BQS8-4_S1165s _1_1_1165_1165 Q9BQS8-4 Q9BQS8-4 Isoform 4 of FYVE and coiled-coil domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17975.17975.3 10.89 10.89 7.482 2 1 1 0 763.7239 2209.1865 S1165s TMT10 1155 (K) SDALEFQQKLsAEER (W) S(0.0)DALEFQQKLS(0.99)AEER K:TMT10,s:Phosphorylated S FYCO1 170710.6 1 2 4678.1 28.1 HUMAN 1 -38.7459 -28.2113 LEFRHLNTIQKMRCE-p Q7L7X3;T669-p LEFRHLNTIQKMRCE 0.176928139947138 0.045174563982733 0.26 0.462333333333333 14.9122316270384 18.0001415327479 0.26 0.462333333333333 0.0322683558256547 0.01584841543029 2.8620062926015 3.45946173512577 Q7L7X3 TAOK1 Q7L7X3.T669.p_TAOK1 Q7L7X3_T669t _1_1_669_669 Q7L7X3 Q7L7X3 Serine/threonine-protein kinase TAO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9043.9043.3 7.67 7.67 99 1 1 1 0 464.5986 1311.8149 T669t TMT10 666 (R) HLNtIQK (M) HLNT(1.0)IQK K:TMT10,t:Phosphorylated T TAOK1 116524.7 2 7 1125.1 174.76 HUMAN 1 14.9122 18.0001 LEFRKARSDMLLSRK-p O75323;S158-p LEFRKARSDMLLSRK 0.395304354889455 0.00165401543705715 0.142333333333333 1.126 7.43572517596191 44.2025706114623 0.142333333333333 1.126 0.180479335130122 3.79964426840712e-05 1.53708943147611 12.1933078620874 O75323 GBAS O75323.S158.p_GBAS O75323_S158s _1_1_158_158 O75323 O75323|O75323-2 Protein NipSnap homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9368.9368.3 12.48 12.48 12.483 2 1 1 0 453.2342 1277.7197 S158s TMT10 156 (K) ARsDMLLSR (K) ARS(0.99)DMLLS(0.0)R s:Phosphorylated S NIPSNAP2 33970.2 1 1 4690.1 27.89 HUMAN 1 7.4357 44.2026 LEGDEDASRMEEVD_-p P08238;S718-p LEGDEDASRMEEVD_ 0.998180995519267 0.193822501080888 0.000333333333333315 0.214 0.0124999937803191 9.3699440314893 0.000333333333333306 0.214 0.997125908198551 0.115612714136767 0.0037715200878631 1.87171942456408 P08238 HSP90AB1 P08238.S718.p_HSP90AB1 P08238_S718s_1_1_718_718 P08238 P08238 Heat shock protein HSP 90-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.32901.33132.4 15.36 15.36 99 1 1 1 0 1112.2592 4365.0289 N701n S718s TMT10 686 (K) LGLGIDEDEVAAEEPnAAVPDEIPPLEGDEDAsRMEEVD (-) LGLGIDEDEVAAEEPN(1.0)AAVPDEIPPLEGDEDAS(1.0)RMEEVD n:Deamidated,s:Phosphorylated S HSP90AB1 83605 2 40 43.2 810.87 HUMAN 1 0.0125 9.3699 LEGGRQDSEDEEERL-p Q9BYE7;S115-p LEGGRQDSEDEEERL 0.945731226553801 0.258912122637804 0.015 0.142666666666667 0.476210111925701 7.73156920851989 0.015 0.142666666666667 0.896146450194871 0.168594374403395 0.136784357428153 1.58807192698513 Q9BYE7 PCGF6 Q9BYE7.S115.p_PCGF6 Q9BYE7_S115s _1_1_115_115 Q9BYE7 Q9BYE7|Q9BYE7-3 Polycomb group RING finger protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36349.36370.5 24.49 18.56 4.43 5 1 1 0 841.8162 4125.0884 S115s TMT10 108 (R) LEGGRQDsEDEEERLINLSELTPYILCSICK (G) LEGGRQDS(0.99)EDEEERLINLS(0.0)ELT(0.0)PY(0.0)ILCS(0.0)ICK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCGF6 39617.3 8 1 4969.1 24.49 HUMAN 1 0.4762 7.7316 LEGIGIGSGQLGFSR-p Q9H201;S163-p LEGIGIGSGQLGFSR 0.348690275429054 0.00476652884648915 0.167 -0.627 8.50371163877583 33.9439609311084 0.167 -0.627 0.141133085431858 0.000403277420821192 1.72244929493425 -7.71342406454836 Q9H201 EPN3 Q9H201.S163.p_EPN3 Q9H201_S163s _1_1_163_163 Q9H201 Q9H201|I6L9I8|Q9H201-2 Epsin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29287.29287.3 17.31 17.31 4.783 2 1 1 0 668.0063 1922.0367 S163s TMT10 154 (R) MALEGIGIGsGQLGFSR (R) MALEGIGIGS(0.99)GQLGFS(0.0)R s:Phosphorylated S EPN3 68392.2 2 1 953.1 196.01 HUMAN 1 8.5037 -33.944 LEGLGNDSRDMYMES-p P08621;S410-p LEGLGNDSRDMYMES 0.23294810372468 0.0118796517356686 0.221666666666667 0.410333333333333 12.1633246598853 26.898767934012 0.221666666666667 0.410333333333333 0.0607669633093384 0.00204231725498551 2.36133773810844 5.53371586964114 P08621 SNRNP70 P08621.S410.p_SNRNP70 P08621_S410s _1_1_410_410 P08621 P08621|P08621-2|P08621-4 U1 small nuclear ribonucleoprotein 70 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28670.28670.5 26.25 26.25 5.084 5 1 1 0 958.6019 4709.0188 S410s TMT10 394 (R) GGGGGQDNGLEGLGNDsRDMYMESEGGDGYLAPENGYLMEAAPE (-) GGGGGQDNGLEGLGNDS(0.99)RDMY(0.0)MES(0.0)EGGDGY(0.0)LAPENGY(0.0)LMEAAPE s:Phosphorylated S SNRNP70 51612.9 16 7 607.1 262.24 HUMAN 1 12.1633 26.8988 LEGMLSQSVSSQYNM-p P54105;S195-p LEGMLSQSVSSQYNM 0.649552236752641 0.0839604466467954 -0.0813333333333333 -0.220666666666667 3.51587721632144 14.2452591029047 -0.0813333333333333 -0.220666666666667 0.445053559020014 0.0376247904404134 -0.82337887819916 -2.73638417669637 P54105 CLNS1A P54105.S195.p_CLNS1A P54105_S195s _1_1_195_195 P54105 P54105|J3KN38|E9PMI6 Methylosome subunit pICln HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24843.24843.3 14.5 14.5 1.802 5 1 1 0 789.3746 2286.142 S195s TMT10 188 (R) LEGMLSQsVSSQYNMAGVR (T) LEGMLS(0.0)QS(0.99)VS(0.0)S(0.0)QY(0.0)NMAGVR s:Phosphorylated S CLNS1A 26386 1 2 2412.1 84.59 HUMAN 1 -3.5159 -14.2453 LEGPHSISPETTVTS-p Q5TC79;S465-p LEGPHSISPETTVTS 0.168849350375006 0.0393543922252008 0.426 0.282333333333333 15.4093057327082 18.8516376880881 0.426 0.282333333333333 0.0287785843515323 0.0130267545782573 2.95557513907669 3.63356463387436 Q5TC79 ZBTB37 Q5TC79.S465.p_ZBTB37 Q5TC79_S465s _1_1_465_465 Q5TC79 Q5TC79 Zinc finger and BTB domain-containing protein 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13860.13860.3 22.02 18.54 1.702 6 1 1 0 932.4514 2715.3722 S465s TMT10 451 (K) NHPGCIPLEGPHSIsPETTVTSR (G) NHPGCIPLEGPHS(0.0)IS(0.99)PET(0.0)T(0.0)VT(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S ZBTB37 56681.5 2 2 3301.1 54.42 HUMAN 1 15.4093 18.8516 LEGPLEDSDCSKTSF-p Q68DQ2;S304-p LEGPLEDSDCSKTSF 0.763094407024719 0.201756503890952 -0.0423333333333333 0.157333333333333 2.25034652112728 9.14630014824291 -0.0423333333333333 0.157333333333333 0.595614617877264 0.121722253814438 -0.563556029277237 1.83302005131717 Q68DQ2 CRYBG3 Q68DQ2.S304.p_CRYBG3 Q68DQ2_S304s _1_1_304_304 Q68DQ2 Q68DQ2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21748.21748.3 16.84 16.84 4.182 2 1 1 0 724.6836 2092.0633 S304s TMT10 294 (K) GNLLEGPLEDsDCSK (T) GNLLEGPLEDS(0.99)DCS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CRYBG3 333308.2 1 2 582.1 265.87 HUMAN 1 -2.2503 9.1463 LEGPLRLSPLLPGGG-p Q96PC5;S1156-p LEGPLRLSPLLPGGG 0.134264480831341 0.0119931109443912 0.273 -0.465666666666667 17.9079565745803 26.8393535862816 0.273 -0.465666666666667 0.0161884154947504 0.00207044949623836 3.44366140475572 -5.51767016100525 Q96PC5 MIA2 Q96PC5.S1156.p_MIA2 Q96PC5_S1156s _1_1_1156_1156 Q96PC5 Q96PC5|G3V599|O15320-5|O15320-10 Melanoma inhibitory activity protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36694.36694.4 20.21 20.21 3.441 3 1 1 0 706.8983 2744.6024 S1156s TMT10 1141 (R) AFLSPPTLLEGPLRLsPLLPGGGGR (G) AFLS(0.0)PPT(0.0)LLEGPLRLS(0.99)PLLPGGGGR s:Phosphorylated S MIA2 160460.4 3 6 569.1 269.96 HUMAN 1 17.908 -26.8394 LEGRSKISVNDFIIK-p P10515;S475-p LEGRSKISVNDFIIK 0.33738946325448 0.00449955991182228 0.136 0.62 8.78975352290103 34.429093757882 0.136 0.62 0.132137062439943 0.000360653892803267 1.77196893813115 7.88639048324672 P10515 DLAT P10515.S475.p_DLAT P10515_S475s _1_1_475_475 P10515 P10515|E9PEJ4 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24777.24777.4 11.49 7.44 2.421 2 1 1 0 508.5527 1951.2195 S475s TMT10 472 (R) SKIsVNDFIIK (A) S(0.0)KIS(0.99)VNDFIIK K:TMT10,s:Phosphorylated S DLAT 69508.9 2 6 2952.1 64.89 HUMAN 1 8.7898 34.4291 LEHAPSPSDVSNAPE-p F5H070;S447-p LEHAPSPSDVSNAPE 0.421053324853859 0.0359968448912861 0.131666666666667 0.272 6.92416726975213 19.4320075678441 0.131666666666667 0.272 0.203040779947823 0.0113972281798204 1.44773245729754 3.75471269297832 F5H070 NotFound F5H070.S447.p_NotFound F5H070_S447s _1_1_447_447 F5H070 F5H070|Q9Y4C1|F8WE62 Lysine-specific demethylase 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11162.11162.3 15.77 15.77 1.106 3 1 1 0 818.0813 2372.261 S447s TMT10 439 (K) HLEHAPSPsDVSNAPEVK (A) HLEHAPS(0.0)PS(0.99)DVS(0.0)NAPEVK K:TMT10,s:Phosphorylated S KDM3A 150340.6 5 3 2638.1 75.64 HUMAN 1 6.9242 19.432 LEHGLPPSPPPPGGP-p Q10586;S131-p LEHGLPPSPPPPGGP 0.147027831986622 0.0488792985170197 0.357 0.334 16.905550483161 17.5334124937732 0.357 0.334 0.0203913017647891 0.0176465069139434 3.24405522681174 3.36577891149294 Q10586 DBP Q10586.S131.p_DBP Q10586_S131s _1_1_131_131 Q10586 Q10586|M0QXP1 D site-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36517.36517.4 22.94 22.94 14 5 1 1 0 1094.302 4294.191 S131s TMT10 108 (R) TLPFGDVEYVDLDAFLLEHGLPPsPPPPGGPSPEPSPAR (T) T(0.0)LPFGDVEY(0.0)VDLDAFLLEHGLPPS(0.99)PPPPGGPS(0.0)PEPS(0.0)PAR s:Phosphorylated S DBP 34462.4 1 2 3711.1 44.75 HUMAN 1 16.9056 17.5334 LEHLSSFSSDEDDPG-p Q2KHR3;S1230-p LEHLSSFSSDEDDPG 0.456457635068981 0.567866779963253 0.101333333333333 -0.0576666666666667 6.2761765800007 3.31281621445742 0.101333333333333 -0.0576666666666667 0.235712352330478 0.466356869705735 1.3336166768888 -0.783146489280291 Q2KHR3 QSER1 Q2KHR3.S1230.p_QSER1 Q2KHR3_S1230sS1231s_2_2_1230_1231 Q2KHR3 Q2KHR3|Q2KHR3-2 Glutamine and serine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20997.20997.3 21.58 21.58 2.22 7 2 2 0 1074.794 3062.4267 S1230s S1231s TMT10 1222 (K) NLEHLSSFssDEDDPGYSQDAYK (S) NLEHLS(0.0)S(0.0)FS(0.99)S(0.99)DEDDPGY(0.0)S(0.0)QDAY(0.0)K K:TMT10,s:Phosphorylated S QSER1 190710.4 2 8 748.1 232.52 HUMAN 1 6.2762 -3.3128 LEHVQPWSV______-p Q01813;S783-p LEHVQPWSV______ 0.141525291296506 0.00827722160832736 0.298 -0.529 17.3666212473542 29.6137442709498 0.298 -0.529 0.0183374049300259 0.00109301361797409 3.33519648474723 -6.30563402605724 Q01813 PFKP Q01813.S783.p_PFKP Q01813_S783s _1_1_783_783 Q01813 Q01813|Q01813-2|B1APP8 ATP-dependent 6-phosphofructokinase, platelet type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22230.22230.3 23.06 23.06 23.062 6 1 1 0 978.4766 2853.4459 S783s TMT10 764 (K) YKASYDVSDSGQLEHVQPWsV (-) Y(0.0)KAS(0.0)Y(0.0)DVS(0.0)DS(0.0)GQLEHVQPWS(0.99)V K:TMT10,s:Phosphorylated S PFKP 86507.4 2 4 1494.1 136.65 HUMAN 1 17.3666 -29.6137 LEINPDHSIIETLRQ-p P07900;S641-p LEINPDHSIIETLRQ 0.418812636084541 0.208852488679825 0.112333333333333 0.124666666666667 6.97728336286722 8.94641982686067 0.112333333333333 0.124666666666667 0.200572627462316 0.127455334564582 1.45703619684202 1.79844501947695 P07900 HSP90AA1 P07900.S641.p_HSP90AA1 P07900_S641s _1_1_641_641 P07900 P07900-2 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18366.18366.3 19.95 19.95 5.19 2 1 1 0 699.3633 2016.1076 S641s TMT10 633 (K) HLEINPDHsIIETLR (Q) HLEINPDHS(0.99)IIET(0.0)LR s:Phosphorylated S HSP90AA1 85057.6 5 20 43.1 810.87 HUMAN 1 6.9773 8.9464 LEINSLKYAYNISLK-p Q13144;Y583-p LEINSLKYAYNISLK 0.145152146047681 0.380476738543455 -0.361333333333333 0.181333333333333 17.0860001185511 5.57816471344733 -0.361333333333333 0.181333333333333 0.0195614024472808 0.276811117533675 -3.27959249861314 1.20876533253342 Q13144 EIF2B5 Q13144.Y583.p_EIF2B5 Q13144_Y583y _1_1_583_583 Q13144 Q13144 Translation initiation factor eIF-2B subunit epsilon GG20160819_MSz_CCLE_T4D7_pY_Injection_02.21623.21623.2 10.65 4.05 5.383 3 1 1 0 755.4105 1429.8455 Y583y TMT10 583 (K) yAYNISLK (E) Y(0.99)AY(0.0)NIS(0.0)LK K:TMT10,y:Phosphorylated Y EIF2B5 81120.1 2 1 327.1 10.65 HUMAN 1 -17.086 5.5782 LEIPPPGTPHSELLE-p A0A087X2H1;T1804-p LEIPPPGTPHSELLE 0.663933616772751 0.0913005956786205 0.089 0.248 3.32865086033871 13.7484210764365 0.0890000000000001 0.248 0.464659599721242 0.0421849843529015 0.786409830391664 2.64529086300907 A0A087X2H1 NotFound A0A087X2H1.T1804.p_NotFound A0A087X2H1_T1804t _1_1_1804_1804 A0A087X2H1 A0A087X2H1|Q9ULT8 E3 ubiquitin-protein ligase HECTD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25136.25136.4 17.49 17.49 2.435 7 1 1 0 970.9714 3800.885 T1804t TMT10 1789 (R) TNVQQTTDLEIPPPGtPHSELLEEVECTPSPR (L) T(0.0)NVQQT(0.0)T(0.0)DLEIPPPGT(0.99)PHS(0.0)ELLEEVECT(0.0)PS(0.0)PR C:Carbamidomethylation,t:Phosphorylated T HECTD1 292594.4 1 17 365.1 342.23 HUMAN 1 3.3287 13.7484 LEIQPLNSQEGIDNE-p P23634;S328-p LEIQPLNSQEGIDNE 0.84792985077906 0.0844065577691071 -0.0306666666666667 0.206666666666667 1.3870631986121 14.2137831489291 -0.0306666666666667 0.206666666666667 0.726597133407749 0.0378984706717257 -0.368336495531061 2.73058611462609 P23634 ATP2B4 P23634.S328.p_ATP2B4 P23634_S328s _1_1_328_328 P23634 P23634|P23634-8|P23634-6 Plasma membrane calcium-transporting ATPase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20826.20826.3 22.54 18.48 21.754 2 1 1 0 1165.2794 3413.8367 S328s TMT10 313 (K) AKTQDGVALEIQPLNsQEGIDNEEK (D) AKT(0.0)QDGVALEIQPLNS(0.99)QEGIDNEEK K:TMT10,s:Phosphorylated S ATP2B4 139115.8 4 15 921.2 200.23 HUMAN 1 -1.3871 14.2138 LEIQRQQSDHDAERL-p Q15149;S2578-p LEIQRQQSDHDAERL 0.274349481664046 0.0093305335540636 0.258 0.542 10.6326658404506 28.6603610245085 0.258 0.542 0.0864437136322915 0.00136133151168233 2.09187314838316 6.02567190520861 Q15149 PLEC Q15149.S2578.p_PLEC Q15149_S2578s _1_1_2578_2578 Q15149 Q15149|Q15149-2|Q15149-3 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21782.21782.5 15.9 11.35 99 1 1 1 0 613.1155 2981.5805 S2578s TMT10 2576 (R) QQsDHDAERLREAIAELEREK (E) QQS(1.0)DHDAERLREAIAELEREK K:TMT10,s:Phosphorylated S PLEC 533778 4 18 44.1 794.85 HUMAN 1 10.6327 28.6604 LEISPDSSPERAHYT-p Q99959;S155-p LEISPDSSPERAHYT 0.422925979108925 0.153486072232388 0.116333333333333 0.261333333333333 6.88311476443656 10.7029293846021 0.116333333333333 0.261333333333333 0.20496916106365 0.0850564125784043 1.44053715841267 2.10322396107121 Q99959 PKP2 Q99959.S155.p_PKP2 Q99959_S154sS155s_2_2_154_155 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12660.12660.3 7.41 7.41 3.392 3 2 2 0 592.2707 1614.8649 S154s S155s TMT10 147 (R) RLEISPDssPER (A) RLEIS(0.0)PDS(0.99)S(0.99)PER s:Phosphorylated S PKP2 97926.6 5 23 257.1 399.17 HUMAN 1 6.8831 10.7029 LEITPRRSPGPPAGG-p O15018;S2521-p LEITPRRSPGPPAGG 0.974387172364495 0.0132386999177217 0.00499999999999999 -0.387 0.220081203331341 26.1336984440631 0.005 -0.387 0.95058701964404 0.00243573566674633 0.0648957991039769 -5.32970927159854 O15018 PDZD2 O15018.S2521.p_PDZD2 O15018_S2521s _1_1_2521_2521 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7569.7569.3 11.59 11.59 6.298 2 1 1 0 678.6809 1954.0581 S2521s TMT10 2520 (R) RsPGPPAGGVSCPEK (G) RS(0.99)PGPPAGGVS(0.0)CPEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PDZD2 304146 2 36 85.1 628.64 HUMAN 1 0.2201 -26.1337 LEIVNHRSPSREKKR-p Q9NRR4;S355-p LEIVNHRSPSREKKR 0.93306667659969 0.75292225678543 -0.014 -0.039 0.592610132398035 1.7021596123416 -0.014 -0.039 0.872446865690795 0.675746863782703 -0.168316258568426 -0.441735430462079 Q9NRR4 DROSHA Q9NRR4.S355.p_DROSHA Q9NRR4_S355s_1_1_355_355 Q9NRR4 Q9NRR4 Ribonuclease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17093.17093.4 14.93 12.66 1.28 4 1 1 0 743.8839 2891.5528 N352n S355s TMT10 340 (K) NTDSWAPPLEIVnHRsPSREK (K) N(0.0)T(0.0)DS(0.0)WAPPLEIVN(0.99)HRS(0.99)PS(0.0)REK K:TMT10,n:Deamidated,s:Phosphorylated S DROSHA 160910.7 9 3 1630.1 125.18 HUMAN 1 -0.5926 -1.7022 LEIYQTLSPRKISRD-p Q9P246-2;S716-p LEIYQTLSPRKISRD 0.370734568672993 0.0103372263610749 -0.159666666666667 -0.445333333333333 7.99016119428439 27.8763301911359 -0.159666666666667 -0.445333333333333 0.158848778862592 0.00163067337732449 -1.63345378628851 -5.8027749584771 Q9P246 STIM2 Q9P246.2.S716.p_STIM2 Q9P246-2_S716s _1_1_716_716 Q9P246-2 Q9P246-2|H0Y860|A0A1W2PRA1|A0A1X7SBY3 Isoform 2 of Stromal interaction molecule 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26830.26830.3 17.65 17.65 1.729 5 1 1 0 713.3753 2058.1433 S716s TMT10 703 (K) QSPPLSLEIYQTLsPR (K) QS(0.0)PPLS(0.0)LEIY(0.0)QT(0.0)LS(0.99)PR s:Phosphorylated S STIM2 94867.7 3 3 1100.1 177.78 HUMAN 1 -7.9902 -27.8763 LEKAFKGSGHWLPAA-p Q86YV5;S889-p LEKAFKGSGHWLPAA 0.572920879096438 0.315077387388172 0.076 -0.126 4.45085497851556 6.62917331402163 0.076 -0.126 0.358851282046031 0.217311479511598 1.00238804209336 -1.39556739428411 Q86YV5 SGK223 Q86YV5.S889.p_SGK223 Q86YV5_S889s _1_1_889_889 Q86YV5 Q86YV5 Tyrosine-protein kinase PRAG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19030.19030.4 14.39 14.39 99 1 1 1 0 587.8167 2268.2766 S889s TMT10 885 (K) AFKGsGHWLPAAGLAGNR (G) AFKGS(1.0)GHWLPAAGLAGNR K:TMT10,s:Phosphorylated S PRAG1 152359.5 2 21 223.1 426.19 HUMAN 1 4.4509 -6.6292 LEKAGPVSPGCVKLA-p E9PNI7;S443-p LEKAGPVSPGCVKLA 0.0902596632769008 0.0079657699052288 -0.573333333333333 -0.803666666666667 22.2226331930313 29.9301833749376 -0.573333333333333 -0.803666666666667 0.005994275240926 0.00101620578405785 -4.37302634553141 -6.40079520433623 E9PNI7 PARP10 E9PNI7.S443.p_PARP10 E9PNI7_S443s _1_1_443_443 E9PNI7 E9PNI7|Q53GL7|E9PK67|E9PPE7 Poly [ADP-ribose] polymerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12365.12365.2 12.92 12.92 99 1 1 1 0 755.399 1429.8237 S443s TMT10 439 (K) AGPVsPGCVK (L) AGPVS(1.0)PGCVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PARP10 112416.9 4 1 3694.1 45.07 HUMAN 1 -22.2226 -29.9302 LEKALELTGLKVFGN-p P19338;T367-p LEKALELTGLKVFGN 0.783443618658916 0.0362196039233353 0.0386666666666667 -0.285333333333333 2.03933565017786 19.3995103228032 0.0386666666666666 -0.285333333333333 0.62526833413274 0.0114828308580452 0.517495686324029 -3.74787406126714 P19338 NCL P19338.T367.p_NCL P19338_T367t _1_1_367_367 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23628.23628.2 12.52 5.78 99 1 1 1 0 691.9069 1302.8397 T367t TMT10 363 (K) ALELtGLK (V) ALELT(1.0)GLK K:TMT10,t:Phosphorylated T NCL 76670.1 2 11 114.1 570.88 HUMAN 1 2.0393 -19.3995 LEKALLSTPNGAPEG-p F8VU39;T1619-p LEKALLSTPNGAPEG 0.896107851974871 0.411006193956125 0.0296666666666667 -0.103333333333333 0.933128822801053 5.13694760695979 0.0296666666666667 -0.103333333333333 0.806653676838065 0.3064116258908 0.257019345627653 -1.12886276285976 F8VU39 BAZ2A F8VU39.T1619.p_BAZ2A F8VU39_T1619t _1_1_1619_1619 F8VU39 Q9UIF9|F8VU39|Q9UIF9-3 Bromodomain adjacent to zinc finger domain protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25275.25275.3 19.93 19.93 1.289 8 1 1 0 943.1357 2747.4301 T1619t TMT10 1615 (K) ALLStPNGAPEGTTTEISYEITPR (I) ALLS(0.0)T(0.99)PNGAPEGT(0.0)T(0.0)T(0.0)EIS(0.0)Y(0.0)EIT(0.0)PR t:Phosphorylated T BAZ2A 212873.4 1 14 471.1 302.34 HUMAN 1 0.9331 -5.1369 LEKCIAYSPPFGDYA-p Q9HCJ3;S635-p LEKCIAYSPPFGDYA 0.975720753289529 0.677769709737346 -0.00500000000000001 -0.052 0.208217729648258 2.30818349843904 -0.00500000000000001 -0.052 0.953187255533384 0.587735130125976 -0.0614755767090653 -0.57594844843471 Q9HCJ3 RAVER2 Q9HCJ3.S635.p_RAVER2 Q9HCJ3_S635s _1_1_635_635 Q9HCJ3 Q9HCJ3|Q9HCJ3-2 Ribonucleoprotein PTB-binding 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.26514.26701.3 22.33 22.33 4.505 5 1 1 0 780.702 2260.127 S635s TMT10 631 (K) CIAYsPPFGDYAQVSSLR (N) CIAY(0.0)S(0.99)PPFGDY(0.0)AQVS(0.0)S(0.0)LR C:Carbamidomethylation,s:Phosphorylated S RAVER2 75021.9 3 2 3540.1 48.71 HUMAN 1 -0.2082 -2.3082 LEKERLHSPGATSTA-p Q9BV73;S2229-p LEKERLHSPGATSTA 0.198987298940634 0.897116264488935 0.277666666666667 -0.0156666666666667 13.6504348522516 0.66100388359679 0.277666666666667 -0.0156666666666666 0.0431475871662634 0.858814981123228 2.62895887761297 -0.186523006136847 Q9BV73 CEP250 Q9BV73.S2229.p_CEP250 Q9BV73_S2229s _1_1_2229_2229 Q9BV73 Q9BV73|Q9BV73-2 Centrosome-associated protein CEP250 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5384.5384.3 18.56 13.38 3.357 5 1 1 0 521.9106 1483.7499 S2229s Hydrogen 2227 (R) LHsPGATSTAELGSR (G) LHS(0.99)PGAT(0.0)S(0.0)T(0.0)AELGS(0.0)R s:Phosphorylated S CEP250 282045.1 3 6 1169.1 170.36 HUMAN 1 13.6504 -0.661 LEKGESASPANEEIT-p Q15022;S695-p LEKGESASPANEEIT 0.426969963497371 0.0697146669156021 0.107 0.203333333333333 6.80872490157433 15.3816989335012 0.107 0.203333333333333 0.208510298418989 0.028962103862422 1.42748820521836 2.94836612614917 Q15022 SUZ12 Q15022.S695.p_SUZ12 Q15022_S695s_1_1_695_695 Q15022 Q15022|J3QQW9 Polycomb protein SUZ12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18989.18989.3 24.05 24.05 2.35 6 1 1 0 1150.8571 3368.613 S695s N706n N710n TMT10 691 (K) GESAsPANEEITEEQnGTAnGFSEINSK (E) GES(0.0)AS(0.99)PAN(0.0)EEIT(0.0)EEQN(0.99)GT(0.0)AN(0.99)GFS(0.0)EIN(0.0)S(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated SUZ12 83795 8 5 1074.1 180.59 HUMAN 1 6.8087 15.3817 LEKIGEGTYGTVFKA-p Q00535;T14-p LEKIGEGTYGTVFKA 0.567246377055338 0.945747460858941 0.112333333333333 -0.0073333333333333 4.53647818197889 0.350138612195148 0.112333333333333 -0.00733333333333331 0.351845646557978 0.922541982246917 1.01838606831784 -0.101842561102242 Q00535 CDK5 Q00535.T14.p_CDK5 Q00535_T14t _1_1_14_14 Q00535 Q00535|Q00535-2 Cyclin-dependent-like kinase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19741.19741.2 8.58 8.58 3.354 3 1 1 0 855.4496 1629.9252 T14t TMT10 10 (K) IGEGtYGTVFK (A) IGEGT(0.99)Y(0.0)GT(0.0)VFK K:TMT10,t:Phosphorylated T CDK5 33760.3 1 1 6942.1 8.58 HUMAN 1 4.5365 -0.3501 LEKIGKGSFGEVFKG-p Q9Y6E0-2;S34-p LEKIGKGSFGEVFKG 0.230695889499121 0.0753713523062308 -0.266 0.222333333333333 12.2409934121351 14.9027072471676 -0.266 0.222333333333333 0.0596898735396776 0.0323392002279429 -2.37515445818263 2.85837329082067 Q9Y6E0 STK24 Q9Y6E0.2.S34.p_STK24 Q9Y6E0-2_S34s _1_1_34_34 Q9Y6E0-2 Q9Y6E0-2|Q9P289|B4DR80|Q8NBY1|Q9P289-3 Isoform A of Serine/threonine-protein kinase 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22340.22340.3 9.23 9.23 99 1 1 1 0 646.0354 1856.1249 S34s TMT10 30 (K) IGKGsFGEVFK (G) IGKGS(1.0)FGEVFK K:TMT10,s:Phosphorylated S STK24 48197.8 1 9 982.1 192.43 HUMAN 1 -12.241 14.9027 LEKINSFSPQKPPGH-p Q9BX63;S206-p LEKINSFSPQKPPGH 0.583840571093275 0.0188323201196026 0.076 -0.628666666666667 4.30089322159119 23.7359898931503 0.076 -0.628666666666667 0.37145882260867 0.00423059070313433 0.974226144436642 -4.72508936639726 Q9BX63 BRIP1 Q9BX63.S206.p_BRIP1 Q9BX63_S206s _1_1_206_206 Q9BX63 Q9BX63|Q9BX63-2|J3QSE8 Fanconi anemia group J protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9868.9868.4 18.19 18.19 2.76 3 1 1 0 563.2873 2170.1592 S206s TMT10 202 (K) INSFsPQKPPGHCSR (C) INS(0.0)FS(0.99)PQKPPGHCS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BRIP1 142871.9 3 4 837.1 214.97 HUMAN 1 4.3009 -23.736 LEKLFPDTPLALDAN-p Q12906-7;T596-p LEKLFPDTPLALDAN 0.140760843773736 0.145815773800021 -0.855333333333333 0.398333333333333 17.4216311820796 11.0162029564419 -0.855333333333334 0.398333333333333 0.01810659892704 0.0791370221867771 -3.34614564111667 2.15797366106085 Q12906 ILF3 Q12906.7.T596.p_ILF3 Q12906-7_T596t _1_1_596_596 Q12906-7 Q12906-7|Q12906-3|Q12906-6|Q12906-2|Q12906-4|Q12906-5 Isoform 7 of Interleukin enhancer-binding factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29372.30028.3 13.61 13.61 99 1 1 1 0 651.6886 1873.0835 T596t TMT10 592 (K) LFPDtPLALDANK (K) LFPDT(1.0)PLALDANK K:TMT10,t:Phosphorylated T ILF3 96205.6 5 13 130.1 537.24 HUMAN 1 -17.4216 11.0162 LEKLGGKSPPPPPPP-p Q5T5P2;S1044-p LEKLGGKSPPPPPPP 0.92935232247217 0.169955002420309 0.014 -0.137666666666667 0.63136404089432 10.1203588169574 0.014 -0.137666666666667 0.86469629056098 0.0972666858081525 0.178669424617512 -2.00180835947408 Q5T5P2 KIAA1217 Q5T5P2.S1044.p_KIAA1217 Q5T5P2_S1044s _1_1_1044_1044 Q5T5P2 Q5T5P2|Q5T5P2-3|Q5T5P2-10|Q5T5P2-7|Q5T5P2-2|Q5T5P2-9|Q5T5P2-6|Q5T5P2-8|Q5T5P2-4 Sickle tail protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9135.9135.4 15.26 15.26 99 1 1 1 0 522.8025 2008.222 S1044s TMT10 1040 (K) LGGKsPPPPPPPPRR (S) LGGKS(1.0)PPPPPPPPRR K:TMT10,s:Phosphorylated S KIAA1217 214739.6 4 12 303.1 376.04 HUMAN 1 0.6314 -10.1204 LEKLQINSPPFDQPM-p Q00537-2;S165-p LEKLQINSPPFDQPM 0.996421434325015 0.511187160701432 -0.000666666666666672 -0.0703333333333333 0.0290688374383062 3.90849623400179 -0.000666666666666667 -0.0703333333333333 0.993329003378121 0.406584086534011 -0.00875410723420848 -0.899447890316912 Q00537 CDK17 Q00537.2.S165.p_CDK17 Q00537-2_S165s _1_1_165_165 Q00537-2 Q00537|Q00537-2|F5H6Z0 Isoform 2 of Cyclin-dependent kinase 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22757.22757.3 15.23 15.23 15.233 2 1 1 0 646.9838 1858.9683 S165s TMT10 161 (K) LQINsPPFDQPMSR (R) LQINS(0.99)PPFDQPMS(0.0)R s:Phosphorylated S CDK17 59872.4 3 16 672.2 248.68 HUMAN 1 -0.0291 -3.9085 LEKLTLNSPIFDKPL-p Q00536-2;S212-p LEKLTLNSPIFDKPL 0.0540939125762963 0.168455218351546 -0.793333333333333 0.186666666666667 27.5554691782783 10.174672652721 -0.793333333333334 0.186666666666667 0.00175571121044903 0.0960578218757701 -5.72149825068712 2.01124467881259 Q00536 CDK16 Q00536.2.S212.p_CDK16 Q00536-2_S212s _1_1_212_212 Q00536-2 Q00536-2|Q00536-3|A0A087WZU2 Isoform 2 of Cyclin-dependent kinase 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25304.25304.3 17.02 17.02 2.941 3 1 1 0 713.7378 2059.2316 S212s TMT10 208 (K) LTLNsPIFDKPLSR (R) LT(0.0)LNS(0.99)PIFDKPLS(0.0)R K:TMT10,s:Phosphorylated S CDK16 63855.9 7 6 672.1 248.68 HUMAN 1 -27.5555 10.1747 LEKLTTASQTNIKKS-p Q9UMY1;S126-p LEKLTTASQTNIKKS 0.571362109790302 0.00123561176676881 -0.0773333333333334 -1.13533333333333 4.47526721209816 47.6019124514426 -0.0773333333333334 -1.13533333333333 0.356839793019418 1.73703574234111e-05 -1.00695516782073 -14.1423562784709 Q9UMY1 NOL7 Q9UMY1.S126.p_NOL7 Q9UMY1_S126s _1_1_126_126 Q9UMY1 Q9UMY1|Q9UMY1-2 Nucleolar protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14045.14045.2 14.81 9.29 2.16 4 1 1 0 807.9496 1534.9205 S126s TMT10 122 (K) LTTAsQTNIK (K) LT(0.0)T(0.0)AS(0.99)QT(0.0)NIK K:TMT10,s:Phosphorylated S NOL7 29482.9 6 1 4036.1 38.77 HUMAN 1 -4.4753 -47.6019 LEKMENQSENNDIDE-p Q99816;S309-p LEKMENQSENNDIDE 0.478500369318771 0.0163838421414318 0.0943333333333333 0.373 5.89174781400443 24.6596241471107 0.0943333333333333 0.373 0.257528452761692 0.00342009039832793 1.26525527532244 4.95201205680484 Q99816 TSG101 Q99816.S309.p_TSG101 Q99816_S309s _1_1_309_309 Q99816 Q99816|F5H442|Q99816-2 Tumor susceptibility gene 101 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30873.30873.3 16.42 16.42 6.995 3 1 1 0 1024.5042 2991.5385 S309s TMT10 305 (K) MENQsENNDIDEVIIPTAPLYK (Q) MENQS(0.99)ENNDIDEVIIPT(0.0)APLY(0.0)K K:TMT10,s:Phosphorylated S TSG101 44114.7 2 2 3863.1 41.56 HUMAN 1 5.8917 24.6596 LEKQQQFTEEEDNLY-p Q5VT06;T2701-p LEKQQQFTEEEDNLY 0.548049797648108 0.119955486556661 -0.0803333333333333 0.171666666666667 4.81921754036444 12.1437449236501 -0.0803333333333334 0.171666666666667 0.329669102646515 0.0610415436340778 -1.07082222193514 2.35666465966458 Q5VT06 CEP350 Q5VT06.T2701.p_CEP350 Q5VT06_T2701t _1_1_2701_2701 Q5VT06 Q5VT06 Centrosome-associated protein 350 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22091.22091.3 14.68 14.68 3.908 3 1 1 0 899.7516 2617.267 T2701t TMT10 2697 (K) QQQFtEEEDNLYAEASEK (L) QQQFT(0.99)EEEDNLY(0.0)AEAS(0.0)EK K:TMT10,t:Phosphorylated T CEP350 352521.4 1 23 265.1 395.34 HUMAN 1 -4.8192 12.1437 LEKSLAVSQGGELYE-p Q9BRT8;S91-p LEKSLAVSQGGELYE 0.289754903438724 0.865460598056603 0.165333333333333 0.0343333333333334 10.144141210429 0.884201905898228 0.165333333333333 0.0343333333333334 0.0967354996003847 0.815792689915604 2.006764215092 0.244550303052723 Q9BRT8 CBWD1 Q9BRT8.S91.p_CBWD1 Q9BRT8_S91s _1_1_91_91 Q9BRT8 Q9BRT8|Q8IUF1|Q5JTY5|Q5RIA9|Q4V339|Q9BRT8-3 COBW domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34352.34352.3 18.09 18.09 4.428 3 1 1 0 796.7289 2308.2022 S91s TMT10 87 (K) SLAVsQGGELYEEWLELR (N) S(0.0)LAVS(0.99)QGGELY(0.0)EEWLELR s:Phosphorylated S CBWD1 44409.6 1 3 3979.1 39.82 HUMAN 1 10.1441 0.8842 LEKSPENSPPVKPKH-p Q8TF72;S443-p LEKSPENSPPVKPKH 0.0883168263052675 0.110642627300877 -0.374333333333333 0.173333333333333 22.4694382245779 12.6228932957466 -0.374333333333333 0.173333333333333 0.00566312538849938 0.0546651658960427 -4.43011136092831 2.44203751110363 Q8TF72 SHROOM3 Q8TF72.S443.p_SHROOM3 Q8TF72_S443s _1_1_443_443 Q8TF72 Q8TF72 Protein Shroom3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9578.9578.3 12.73 12.73 2.574 2 1 1 0 649.702 1867.1256 S443s TMT10 439 (K) SPENsPPVKPK (H) S(0.0)PENS(0.99)PPVKPK K:TMT10,s:Phosphorylated S SHROOM3 218451.1 2 37 90.2 622.62 HUMAN 1 -22.4694 12.6229 LEKSTGHTPTKPSGS-p Q8NI08-2;T347-p LEKSTGHTPTKPSGS 0.911605742223265 0.0033207682051555 -0.0193333333333333 -1.27066666666667 0.786600530668795 37.1151181451356 -0.0193333333333333 -1.27066666666667 0.834334009654683 0.000194306883201491 -0.219458136753723 -8.90647850397481 Q8NI08 NCOA7 Q8NI08.2.T347.p_NCOA7 Q8NI08-2_T347t _1_1_347_347 Q8NI08-2 Q8NI08|Q8NI08-2|Q8NI08-7 Isoform 2 of Nuclear receptor coactivator 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6380.6380.4 10.78 10.78 2.843 8 1 1 0 614.3261 2374.3181 T347t TMT10 343 (K) STGHtPTKPSGSSVSEK (L) S(0.0)T(0.0)GHT(0.99)PT(0.0)KPS(0.0)GS(0.0)S(0.0)VS(0.0)EK K:TMT10,t:Phosphorylated T NCOA7 105415.6 2 5 906.1 202.52 HUMAN 1 -0.7866 -37.1151 LEKTRRESQSEREEF-p Q5VT25-2;S750-p LEKTRRESQSEREEF 0.011478949024396 0.0425800710620672 -1.15566666666667 -0.319 46.4878993011034 18.3634061034366 -1.15566666666667 -0.319 2.24496756053018e-05 0.0145767058369705 -13.511230019064 -3.53322221251293 Q5VT25 CDC42BPA Q5VT25.2.S750.p_CDC42BPA Q5VT25-2_S750s _1_1_750_750 Q5VT25-2 Q5VT25-6|Q5VT25-2|Q5VT25-5|A0A0A0MRJ0|Q5VT25-4|Q5VT25-3|A0A0A0MRJ1 Isoform 2 of Serine/threonine-protein kinase MRCK alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11492.11492.3 12.16 12.16 1.675 3 1 1 0 742.6705 2146.025 S750s Hydrogen 748 (R) REsQSEREEFESEFK (Q) RES(0.99)QS(0.0)EREEFES(0.0)EFK K:TMT10-Lys-Only,s:Phosphorylated S CDC42BPA 201918 3 3 917.1 200.65 HUMAN 1 -46.4879 -18.3634 LEKTTTIYEEDKRNL-p Q02241;Y582-p LEKTTTIYEEDKRNL 0.0478194935682717 0.161909583651302 -0.465 -0.187666666666667 29.2886323618714 10.398444770637 -0.465 -0.187666666666667 0.00117797687218778 0.0912337493295028 -6.21857444079558 -2.05016043706467 Q02241 KIF23 Q02241.Y582.p_KIF23 Q02241_Y582y _1_1_582_582 Q02241 Q02241|H7BYN4|Q02241-2|Q02241-3 Kinesin-like protein KIF23 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8974.9009.3 12.9 12.9 12.899 4 1 1 0 598.6411 1713.9423 Y582y TMT10 578 (K) TTTIyEEDKR (N) T(0.0)T(0.0)T(0.0)IY(0.99)EEDKR K:TMT10,y:Phosphorylated Y KIF23 111083.9 1 1 272.1 12.9 HUMAN 1 -29.2886 -10.3984 LELAPARTPPDSVKD-p Q9UHR6;T161-p LELAPARTPPDSVKD 0.816423797251308 0.893320961514293 -0.035 -0.016 1.6914910623495 0.687184601065705 -0.035 -0.016 0.677408893025595 0.853653332152449 -0.439342215764724 -0.19344158148104 Q9UHR6 ZNHIT2 Q9UHR6.T161.p_ZNHIT2 Q9UHR6_T161t _1_1_161_161 Q9UHR6 Q9UHR6 Zinc finger HIT domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29131.29131.5 25.91 26.7 3.017 3 1 1 0 794.2081 3887.0438 T161t TMT10 134 (R) GAGPQLLEELDNAPGSDAAELELAPARtPPDSVK (D) GAGPQLLEELDNAPGS(0.0)DAAELELAPART(0.99)PPDS(0.0)VK K:TMT10,t:Phosphorylated T ZNHIT2 43567.5 6 2 3414.1 51.69 HUMAN 1 -1.6915 -0.6872 LELESRGSAEKLGTE-p A6NDB9;S439-p LELESRGSAEKLGTE 0.437828237084222 0.00289051128323247 -0.283333333333333 0.780333333333333 6.60522103507245 38.3733472755368 -0.283333333333333 0.780333333333333 0.218513310402304 0.000145433773416624 -1.3917164151601 9.42324941908431 A6NDB9 PALM3 A6NDB9.S439.p_PALM3 A6NDB9_S439s _1_1_439_439 A6NDB9 A6NDB9 Paralemmin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10719.10719.4 11.59 11.59 2.192 2 1 1 0 529.3013 2034.2162 S439s TMT10 431 (K) KLELESRGsAEK (L) KLELES(0.0)RGS(0.99)AEK K:TMT10,s:Phosphorylated S PALM3 72036.5 2 7 888.1 205.52 HUMAN 1 -6.6052 38.3733 LELGEKLSPLPGGPG-p Q15742;S171-p LELGEKLSPLPGGPG 0.649901003934758 0.406319264428027 0.0893333333333333 0.0866666666666667 3.5103820895829 5.2076565839665 0.0893333333333333 0.0866666666666667 0.445617041562789 0.301463225528439 0.822299878018161 1.14174071138535 Q15742 NAB2 Q15742.S171.p_NAB2 Q15742_S171s _1_1_171_171 Q15742 Q15742|Q15742-3|Q15742-2 NGFI-A-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23477.23477.4 13.89 12.01 4.802 2 1 1 0 671.363 2602.4605 S171s TMT10 162 (K) SPLELGEKLsPLPGGPGAGDPR (I) S(0.0)PLELGEKLS(0.99)PLPGGPGAGDPR K:TMT10,s:Phosphorylated S NAB2 56878.4 3 5 983.1 192.11 HUMAN 1 3.5104 5.2077 LELILTQSVENVGVR-p Q9BYD2;S101-p LELILTQSVENVGVR 0.990134703147355 0.0291022022898436 0.00199999999999998 0.299333333333333 0.089203102773478 20.794108178975 0.00199999999999998 0.299333333333333 0.979669730835462 0.00832892942474737 0.0266820225274457 4.04750444479561 Q9BYD2 MRPL9 Q9BYD2.S101.p_MRPL9 Q9BYD2_S101s _1_1_101_101 Q9BYD2 Q9BYD2|Q5SZR1 39S ribosomal protein L9, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28008.28008.3 16.04 12.07 1.13 2 1 1 0 741.393 2142.1968 S101s TMT10 92 (K) ENLELILTQsVENVGVR (G) ENLELILT(0.0)QS(0.99)VENVGVR s:Phosphorylated S MRPL9 30413.9 1 1 4269.1 34.45 HUMAN 1 0.0892 20.7941 LELQDDGSDSRKSMR-p Q15906-2;S127-p LELQDDGSDSRKSMR 0.987422290515613 0.0368977475396165 -0.00333333333333333 0.547333333333333 0.111783775013172 19.271323281074 -0.00333333333333333 0.547333333333333 0.974589263060854 0.0118268114174592 -0.0333524093249974 3.72096308962216 Q15906 VPS72 Q15906.2.S127.p_VPS72 Q15906-2_S127s _1_1_127_127 Q15906-2 Q15906-2|A0A1W2PPT2 Isoform 2 of Vacuolar protein sorting-associated protein 72 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24091.24091.3 14.61 14.61 4.249 2 1 1 0 765.7375 2215.2334 S127s TMT10 116 (K) ALLPLELQDDGsDSRK (S) ALLPLELQDDGS(0.99)DS(0.0)RK K:TMT10,s:Phosphorylated S VPS72 42132.4 3 1 6019.1 14.61 HUMAN 1 -0.1118 19.2713 LELQEVDSLLRGRQV-p P16144;S1069-p LELQEVDSLLRGRQV 0.0622506947834567 0.0181531288520756 -0.451333333333333 -0.394666666666667 26.25224618278 23.9734448370543 -0.451333333333333 -0.394666666666667 0.00237014754189676 0.00400548874999812 -5.36808527879393 -4.78274029921396 P16144 ITGB4 P16144.S1069.p_ITGB4 P16144_S1069s _1_1_1069_1069 P16144 P16144|P16144-3|P16144-2|P16144-4 Integrin beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.35011.35011.3 15.63 11.39 99 1 1 1 0 579.6511 1656.9734 S1069s TMT10 1061 (K) LLELQEVDsLLR (G) LLELQEVDS(1.0)LLR s:Phosphorylated S ITGB4 205872.1 4 3 708.1 238.91 HUMAN 1 -26.2522 -23.9734 LELSSSASPQEERTV-p Q9C0C7-3;S639-p LELSSSASPQEERTV 0.102728705875057 0.0316862798602512 -0.335666666666667 -0.579 20.8624949536586 20.2452703927189 -0.335666666666667 -0.579 0.00819880400584055 0.00945089549121563 -4.06654492085501 -3.92805355108243 Q9C0C7 AMBRA1 Q9C0C7.3.S639.p_AMBRA1 Q9C0C7-3_S639s _1_1_639_639 Q9C0C7-3 Q9C0C7|Q9C0C7-3|Q9C0C7-2|Q9C0C7-4|A0A075B6T1|Q9C0C7-6|Q9C0C7-5 Isoform 3 of Activating molecule in BECN1-regulated autophagy protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13185.13185.2 15.32 11.39 2.209 4 1 1 0 871.418 1661.8544 S639s TMT10 632 (R) LELSSSAsPQEER (T) LELS(0.0)S(0.0)S(0.0)AS(0.99)PQEER s:Phosphorylated S AMBRA1 140121.9 3 2 3439.1 51.06 HUMAN 1 -20.8625 -20.2453 LELTSSYSPDVSDYK-p P38432;S489-p LELTSSYSPDVSDYK 0.367999212728304 0.78096640840279 -0.125333333333333 -0.0366666666666666 8.05026916826681 1.48572404642872 -0.125333333333333 -0.0366666666666666 0.15666539685747 0.710276744318722 -1.6438798720136 -0.391598154563538 P38432 COIL P38432.S489.p_COIL P38432_S489s _1_1_489_489 P38432 P38432 Coilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24147.24147.3 19.44 19.44 1.101 7 1 1 0 899.7867 2617.3761 S489s TMT10 481 (K) LLELTSSYsPDVSDYKEGR (I) LLELT(0.0)S(0.0)S(0.0)Y(0.0)S(0.99)PDVS(0.0)DY(0.0)KEGR K:TMT10,s:Phosphorylated S COIL 63291.8 4 15 395.1 330.42 HUMAN 1 -8.0503 -1.4857 LELVRKWSLNTYKCT-p P53367;S132-p LELVRKWSLNTYKCT 0.442166753729494 0.372248428057455 -0.249333333333333 -0.183333333333333 6.53136895927494 5.69453425946908 -0.249333333333333 -0.183333333333333 0.222260918152975 0.269492432248013 -1.37870577394815 -1.22967155669599 P53367 ARFIP1 P53367.S132.p_ARFIP1 P53367_S132s _1_1_132_132 P53367 P53367|P53367-2 Arfaptin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18349.18349.3 10.6 10.6 1.134 3 1 1 0 603.0087 1727.0459 S132s TMT10 130 (R) KWsLNTYK (C) KWS(0.99)LNT(0.0)Y(0.0)K K:TMT10,s:Phosphorylated S ARFIP1 41794.6 4 4 1635.1 125.02 HUMAN 1 -6.5314 -5.6945 LEMEMLKSLENLNSG-p Q14191;S478-p LEMEMLKSLENLNSG 0.137499094333126 0.507979402094153 -0.257333333333333 -0.076 17.6431230899941 3.94220186965771 -0.257333333333333 -0.076 0.0172063079332904 0.403440796935571 -3.39039701088137 -0.905913395047921 Q14191 WRN Q14191.S478.p_WRN Q14191_S478s _1_1_478_478 Q14191 Q14191 Werner syndrome ATP-dependent helicase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12621.12621.3 16.85 12.03 2.343 5 1 1 0 751.0535 2171.1708 S478s TMT10 478 (K) sLENLNSGTVEPTHSK (C) S(0.99)LENLNS(0.0)GT(0.0)VEPT(0.0)HS(0.0)K K:TMT10,s:Phosphorylated S WRN 164512 1 2 3102.1 60.61 HUMAN 1 -17.6431 -3.9422 LEMKANFSLPEKCDY-p Q1KMD3;S597-p LEMKANFSLPEKCDY 0.303423649713577 0.00963323639650954 -0.268 0.594333333333333 9.70650586892405 28.4283789803944 -0.268 0.594333333333333 0.106991533706999 0.00143602533489938 -1.93076256582688 5.9590443495332 Q1KMD3 HNRNPUL2 Q1KMD3.S597.p_HNRNPUL2 Q1KMD3_S597s _1_1_597_597 Q1KMD3 Q1KMD3|H3BQZ7 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19598.19598.2 9.74 9.74 99 1 1 1 0 722.3873 1363.7986 S597s TMT10 594 (K) ANFsLPEK (C) ANFS(1.0)LPEK K:TMT10,s:Phosphorylated S HNRNPUL2 85673.7 1 9 294.1 379.87 HUMAN 1 -9.7065 28.4284 LEMSSDASDASGEEG-p P35269;S221-p LEMSSDASDASGEEG 0.683208662620214 0.00855566836817945 0.056 0.511666666666667 3.10127749462889 29.3335889187304 0.056 0.511666666666667 0.489634770152627 0.00116584578830554 0.740908889348689 6.22232570453926 P35269 GTF2F1 P35269.S221.p_GTF2F1 P35269_S217sS218sS221s_3_3_217_221 P35269 P35269 General transcription factor IIF subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19834.20605.4 21.25 21.25 2.321 4 3 3 0 894.1264 3317.5844 M216m S217s S218s S221s TMT10 207 (R) IHDLEDDLEmssDAsDASGEEGGRVPK (A) IHDLEDDLEM(1.0)S(0.99)S(0.99)DAS(0.99)DAS(0.0)GEEGGRVPK K:TMT10,m:Oxidized methionine,s:Phosphorylated S GTF2F1 58296.5 10 17 1159.1 171.17 HUMAN 1 3.1013 29.3336 LENDFFNSPPRKTVR-p Q9NYV6;S44-p LENDFFNSPPRKTVR 0.00874686268802314 0.00105578872948118 -1.42966666666667 -1.148 51.7371347129159 50.624363123316 -1.42966666666667 -1.148 6.70326716123117e-06 8.66091323114905e-06 -16.9704506830404 -16.1217562175876 Q9NYV6 RRN3 Q9NYV6.S44.p_RRN3 Q9NYV6_S44s _1_1_44_44 Q9NYV6 Q9NYV6|H3BMT1|F5H148|Q9NYV6-3|A6NIE6|Q9NYV6-2 RNA polymerase I-specific transcription initiation factor RRN3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19129.19333.3 16.15 10.27 99 1 1 1 0 691.6904 1993.0907 S44s TMT10 36 (R) ALENDFFNsPPRK (T) ALENDFFNS(1.0)PPRK K:TMT10,s:Phosphorylated S RRN3 74904.7 3 1 2705.1 73.33 HUMAN 1 -51.7371 -50.6244 LENVSQLSLDKSPTE-p Q86W56;S133-p LENVSQLSLDKSPTE 0.26463240481466 0.522618891044191 -0.198666666666667 -0.109333333333333 10.9530023192764 3.78593893913775 -0.198666666666667 -0.109333333333333 0.0802970828856734 0.418221259972897 -2.14787775149009 -0.875841321737201 Q86W56 BPHL Q86W56.S133.p_BPHL Q86W56_S133s _1_1_133_133 Q86W56 Q86W56|Q86W56-2|Q86W56-3 Poly(ADP-ribose) glycohydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19859.19859.3 17.7 17.7 1.634 4 1 1 0 852.4697 2475.4273 S133s TMT10 126 (K) LENVSQLsLDKSPTEK (S) LENVS(0.0)QLS(0.99)LDKS(0.0)PT(0.0)EK K:TMT10,s:Phosphorylated S PARG 112534.8 5 2 855.1 211.13 HUMAN 1 -10.953 -3.7859 LEPDTPLSPEELKEK-p Q5VTI5;S960-p LEPDTPLSPEELKEK 0.20055874973276 0.0089932258791759 -0.208666666666667 -0.439 13.5737223897738 28.966204976653 -0.208666666666667 -0.439 0.0439165040486237 0.00126876007034859 -2.61498079760753 -6.11439754195946 Q5VTI5 NotFound Q5VTI5.S960.p_NotFound Q5VTI5_S960s _1_1_960_960 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29306.29306.3 19.41 19.41 2.887 3 1 1 0 799.7493 2317.2579 S960s TMT10 950 (R) YIDLEPDTPLsPEELK (E) Y(0.0)IDLEPDT(0.0)PLS(0.99)PEELK K:TMT10,s:Phosphorylated S PLEKHA6 119745.7 3 32 52.1 743.36 HUMAN 1 -13.5737 -28.9662 LEPETEESENEFYIK-p Q6P0N0;S824-p LEPETEESENEFYIK 0.309487852347872 0.00684539655489716 0.154333333333333 -0.467333333333333 9.52477993649136 31.0568865590593 0.154333333333333 -0.467333333333333 0.111563468079628 0.000783991481920887 1.89925307415735 -6.74904387598487 Q6P0N0 MIS18BP1 Q6P0N0.S824.p_MIS18BP1 Q6P0N0_S824s _1_1_824_824 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30604.30604.4 21.21 18.5 1.143 5 1 1 0 809.1537 3153.6244 S824s TMT10 809 (R) NTSNIPVILEPETEEsENEFYIK (Q) NT(0.0)S(0.0)NIPVILEPET(0.0)EES(0.99)ENEFY(0.0)IK K:TMT10,s:Phosphorylated S MIS18BP1 129996 5 29 54.1 728.39 HUMAN 1 9.5248 -31.0569 LEPGEVPSDSDEDGE-p Q96T58;S1380-p LEPGEVPSDSDEDGE 0.62773843923883 0.23444264087742 0.170333333333333 0.251333333333333 3.75726986148804 8.29513158443299 0.170333333333333 0.251333333333333 0.420991196122346 0.148076738965276 0.870437540588849 1.68576791590687 Q96T58 SPEN Q96T58.S1380.p_SPEN Q96T58_S1380sS1382s_2_2_1380_1382 Q96T58 Q96T58 Msx2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.10191.10460.3 7.72 7.72 99 2 2 2 0 781.9769 2183.9778 S1380s S1382s Hydrogen 1372 (R) DLEPGEVPsDsDEDGEHK (S) DLEPGEVPS(1.0)DS(1.0)DEDGEHK K:TMT10-Lys-Only,s:Phosphorylated S SPEN 403267.9 1 9 2199.1 93.72 HUMAN 1 3.7573 8.2951 LEPKESRSPQQSAAL-p Q6IBW4-4;S284-p LEPKESRSPQQSAAL 0.59351749575714 0.0940551871574619 0.109666666666667 0.233666666666667 4.17905275788563 13.5766985637574 0.109666666666667 0.233666666666667 0.382027586003407 0.0438864188442908 0.951204664243373 2.61401177369225 Q6IBW4 NCAPH2 Q6IBW4.4.S284.p_NCAPH2 Q6IBW4-4_S284s _1_1_284_284 Q6IBW4-4 Q6IBW4-4|A0A0A6YYG7|Q6IBW4-2 Isoform 4 of Condensin-2 complex subunit H2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4325.4325.4 14.38 10.71 1.208 3 1 1 0 473.7485 1812.0038 S284s TMT10 281 (K) ESRsPQQSAALPRR (Y) ES(0.0)RS(0.99)PQQS(0.0)AALPRR s:Phosphorylated S NCAPH2 68752.9 3 6 1022.1 187.64 HUMAN 1 4.1791 13.5767 LEPLPPLTPKFLNIL-p Q5VYS8;T994-p LEPLPPLTPKFLNIL 0.569737548726187 0.677769709737346 0.115333333333333 0.0743333333333334 4.49605274902319 2.30820539127102 0.115333333333333 0.0743333333333334 0.355136021506018 0.587732167354273 1.01084007417171 0.575953152593528 Q5VYS8 ZCCHC6 Q5VYS8.T994.p_ZCCHC6 Q5VYS8_T994t _1_1_994_994 Q5VYS8 Q5VYS8|Q5VYS8-6 Terminal uridylyltransferase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29062.29062.3 11.02 11.02 99 1 1 1 0 628.7079 1804.1348 T994t TMT10 985 (R) IQLEPLPPLtPK (F) IQLEPLPPLT(1.0)PK K:TMT10,t:Phosphorylated T ZCCHC6 173394.2 1 4 2208.1 93.42 HUMAN 1 4.4961 2.3082 LEPPDMPSPILQNEA-p O75529;S230-p LEPPDMPSPILQNEA 0.340422607907547 0.14208331055329 0.153666666666667 0.165666666666667 8.70591003955725 11.1682928543956 0.153666666666667 0.165666666666667 0.134712841261683 0.0764136094835479 1.75745544108697 2.18461705803849 O75529 TAF5L O75529.S230.p_TAF5L O75529_S230s _1_1_230_230 O75529 O75529|O75529-2 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36629.36629.4 23.37 19.57 9.537 3 1 1 0 950.982 3720.9406 S230s TMT10 218 (R) SENNGLEPPDMPsPILQNEAALEVLQESIK (R) S(0.0)ENNGLEPPDMPS(0.99)PILQNEAALEVLQES(0.0)IK K:TMT10,s:Phosphorylated S TAF5L 66838.7 13 1 3733.1 44.29 HUMAN 1 8.7059 11.1683 LEPVSPPSPPHTDPE-p Q9Y618;S152-p LEPVSPPSPPHTDPE 0.911605742223265 0.305515002866125 -0.018 0.11 0.784403501787245 6.80250662615123 -0.018 0.11 0.834756193156441 0.208809059555969 -0.218888208674278 1.42601391197431 Q9Y618 NCOR2 Q9Y618.S152.p_NCOR2 Q9Y618_S152s _1_1_152_152 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22817.22817.4 15.02 15.02 1.362 5 1 1 0 800.4238 3118.6986 S152s Hydrogen 140 (R) SLTGKLEPVSPPsPPHTDPELELVPPR (L) S(0.0)LT(0.0)GKLEPVS(0.0)PPS(0.99)PPHT(0.0)DPELELVPPR K:TMT10-Lys-Only,s:Phosphorylated S NCOR2 275540.8 2 5 16.1 1053.89 HUMAN 1 -0.7844 6.8025 LEQDRVQSLKDKNEA-p Q9Y450-2;S127-p LEQDRVQSLKDKNEA 0.00781837736148573 0.00656985067540211 -2.255 -1.35466666666667 58.8561329575409 31.382669495829 -2.25993853195175 -1.35466666666667 1.30132778986114e-06 0.000727332594576801 -23.0594521435696 -6.85256027359295 Q9Y450 HBS1L Q9Y450.2.S127.p_HBS1L Q9Y450-2_S127s _1_1_127_127 Q9Y450-2 Q9Y450|Q9Y450-4|Q9Y450-2|E9PLR4|G5E991 Isoform 2 of HBS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20257.20257.3 16.59 16.59 6.591 2 1 1 0 727.7399 2101.2381 S127s TMT10 115 (K) ALSGVLEQDRVQsLK (D) ALS(0.0)GVLEQDRVQS(0.99)LK K:TMT10,s:Phosphorylated S HBS1L 70811.6 1 6 2070.1 99.42 HUMAN 1 -58.8561 -31.3827 LEQHPAFSPVMNYKD-p Q71F56;S878-p LEQHPAFSPVMNYKD 0.299884987326807 0.0154546550147685 -0.215333333333333 0.402666666666667 9.82981694304648 25.0477211284189 -0.215333333333333 0.402666666666667 0.10399639998259 0.00312772014386031 -1.95215845736893 5.04955506588399 Q71F56 MED13L Q71F56.S878.p_MED13L Q71F56_S878s _1_1_878_878 Q71F56 Q71F56 Mediator of RNA polymerase II transcription subunit 13-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28394.28394.3 18.12 18.12 6.208 4 1 1 0 986.158 2876.488 S878s TMT10 864 (R) MFPTPPSLEQHPAFsPVMNYK (D) MFPT(0.0)PPS(0.0)LEQHPAFS(0.99)PVMNY(0.0)K K:TMT10,s:Phosphorylated S MED13L 245507 17 10 415.1 321.44 HUMAN 1 -9.8298 25.0477 LEQLTGQTPVFSKAR-p P62913;T47-p LEQLTGQTPVFSKAR 0.829567152899261 0.439858080874133 -0.046 -0.104333333333333 1.56134324544905 4.75114447624371 -0.046 -0.104333333333333 0.698016478591057 0.334877178888484 -0.409307442971087 -1.0580453031635 P62913 RPL11 P62913.T47.p_RPL11 P62913_T47t _1_1_47_47 P62913 P62913|P62913-2 60S ribosomal protein L11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26933.26933.3 17.58 17.58 4.535 3 1 1 0 695.7191 2005.1734 T47t TMT10 39 (K) VLEQLTGQtPVFSK (A) VLEQLT(0.0)GQT(0.99)PVFS(0.0)K K:TMT10,t:Phosphorylated T RPL11 20480.2 1 2 3548.1 48.49 HUMAN 1 -1.5613 -4.7511 LEQNQTISPLSTYEE-p Q9UQR1;S412-p LEQNQTISPLSTYEE 0.10832064716918 0.83535968799154 -0.332666666666667 0.0223333333333334 20.2511066996221 1.09545794988743 -0.332666666666667 0.0223333333333334 0.00943820334729609 0.77705937600345 -3.93304900718077 0.297624871273408 Q9UQR1 ZNF148 Q9UQR1.S412.p_ZNF148 Q9UQR1_S412s _1_1_412_412 Q9UQR1 Q9UQR1 Zinc finger protein 148 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20040.20040.4 19.5 21.15 1.138 7 1 1 0 765.3993 2978.6087 S412s Hydrogen 400 (R) SLKQPLEQNQTIsPLSTYEESK (V) S(0.0)LKQPLEQNQT(0.0)IS(0.99)PLS(0.0)T(0.0)Y(0.0)EES(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S ZNF148 89602.2 9 3 975.1 192.87 HUMAN 1 -20.2511 1.0955 LEQRRMASEGSMAQE-p Q8IV31;S146-p LEQRRMASEGSMAQE 0.237800187730078 0.0106932352965192 0.183 0.465666666666667 11.957649339 27.6342360270421 0.183 0.465666666666667 0.0637140285954378 0.00172415536271889 2.32482501166811 5.73524230415402 Q8IV31 TMEM139 Q8IV31.S146.p_TMEM139 Q8IV31_S146s _1_1_146_146 Q8IV31 Q8IV31 Transmembrane protein 139 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5269.5269.2 15.05 15.05 4.718 3 1 1 0 787.8011 1494.6312 S146s Hydrogen 144 (R) MAsEGSMAQEGSPGR (A) MAS(0.99)EGS(0.0)MAQEGS(0.0)PGR s:Phosphorylated S TMEM139 23956.9 4 1 3101.1 60.61 HUMAN 1 11.9576 27.6342 LERAYSQSPRHALYP-p X6RAB3;S599-p LERAYSQSPRHALYP 0.318186434439024 0.00339716521919051 0.208333333333333 -0.609 9.31214060228162 36.9125653627265 0.208333333333333 -0.609 0.117161774232312 0.000203583915919695 1.86241045180559 -8.82569600049424 X6RAB3 NotFound X6RAB3.S599.p_NotFound X6RAB3_S599s _1_1_599_599 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4423.4423.2 9.31 5.38 1.465 3 1 1 0 559.2658 1037.5577 S599s TMT10 595 (R) AYSQsPR (H) AY(0.0)S(0.0)QS(0.99)PR s:Phosphorylated S USP6NL 96835.5 2 8 364.1 342.41 HUMAN 1 9.3121 -36.9126 LERDQKLSELDDRAD-p Q15836;S44-p LERDQKLSELDDRAD 0.211225916898506 0.719381471246989 -0.293 -0.0846666666666666 13.0384055815573 1.9701060433342 -0.293 -0.0846666666666666 0.0496774668071887 0.635315418924314 -2.51798971162606 -0.502113606376549 Q15836 VAMP3 Q15836.S44.p_VAMP3 Q15836_S44s _1_1_44_44 Q15836 F8WCA0|P63027|J3QRU4|Q15836|K7EKX0|K7ENK9 Vesicle-associated membrane protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22150.22150.5 8.99 8.99 8.987 4 1 1 0 727.3766 3552.8749 S44s TMT10 40 (R) DQKLsELDDRADALQAGASQFETSAAK (L) DQKLS(0.99)ELDDRADALQAGAS(0.0)QFET(0.0)S(0.0)AAK K:TMT10,s:Phosphorylated S VAMP3 11365.9 1 2 6069.1 14.26 HUMAN 1 -13.0384 -1.9701 LEREAKKSAKKPQSS-p Q7Z4V5-4;S412-p LEREAKKSAKKPQSS 0.146473317485752 0.0133061434248685 -0.283 -0.738 16.9903509143119 26.0950547226149 -0.283 -0.738 0.0199970028530928 0.00245750566559402 -3.26073457403716 -5.319553175243 Q7Z4V5 HDGFRP2 Q7Z4V5.4.S412.p_HDGFRP2 Q7Z4V5-4_S412s _1_1_412_412 Q7Z4V5-4 Q7Z4V5-3|Q7Z4V5-4|Q7Z4V5-2 Isoform 4 of Hepatoma-derived growth factor-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5419.5419.5 8.8 8.8 6.441 5 1 1 0 648.3799 3157.903 S412s TMT10 412 (K) sAKKPQSSSTEPARKPGQK (E) S(0.99)AKKPQS(0.0)S(0.0)S(0.0)T(0.0)EPARKPGQK K:TMT10,s:Phosphorylated S HDGFL2 74899.1 2 6 712.1 238.42 HUMAN 1 -16.9904 -26.0951 LERGRKVSIVSKPVL-p Q9NRY4;S1150-p LERGRKVSIVSKPVL 0.188778224113783 0.0792122079289701 -0.271 0.416 14.1878568710197 14.6145799281228 -0.271 0.416 0.0381253915755083 0.0345574753722333 -2.72747497055803 2.80470023060066 Q9NRY4 ARHGAP35 Q9NRY4.S1150.p_ARHGAP35 Q9NRY4_S1150s _1_1_1150_1150 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15126.15126.3 13.1 13.1 4.411 3 1 1 0 643.0569 1847.1883 S1150s Hydrogen 1148 (R) KVsIVSKPVLYR (T) KVS(0.99)IVS(0.0)KPVLY(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S ARHGAP35 172051.4 7 11 247.1 410.47 HUMAN 1 -14.1879 14.6146 LERLYNRTPEQVAEE-p Q9NPF5;T237-p LERLYNRTPEQVAEE 0.481836619360747 0.169078250364899 0.12 0.174 5.83445939781967 10.1532549624875 0.12 0.174 0.260948052637322 0.0965327111721689 1.25501720214755 2.00752322468797 Q9NPF5 DMAP1 Q9NPF5.T237.p_DMAP1 Q9NPF5_T237t _1_1_237_237 Q9NPF5 Q9NPF5 DNA methyltransferase 1-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27330.27330.3 17.03 10.26 4.583 3 1 1 0 934.805 2722.4249 T237t TMT10 233 (R) LYNRtPEQVAEEEYLLQELR (K) LY(0.0)NRT(0.99)PEQVAEEEY(0.0)LLQELR t:Phosphorylated T DMAP1 53162.8 3 1 1615.1 127.51 HUMAN 1 5.8345 10.1533 LERMGANSLERMGLE-p P52272;S575-p LERMGANSLERMGLE 0.936325615209413 0.176940003118073 -0.0226666666666667 0.159333333333333 0.556371417924514 9.89321867150234 -0.0226666666666667 0.159333333333333 0.879757257503233 0.102489207003655 -0.158570557779282 1.96238068817869 P52272 HNRNPM P52272.S575.p_HNRNPM P52272_S575s _1_1_575_575 P52272 P52272|A0A087X0X3|P52272-2 Heterogeneous nuclear ribonucleoprotein M HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8429.8429.2 7.47 7.47 99 1 1 1 0 593.7783 1106.5826 S575s TMT10 571 (R) MGANsLER (M) MGANS(1.0)LER s:Phosphorylated S HNRNPM 77799.7 1 11 830.1 216.57 HUMAN 1 -0.5564 9.8932 LERNRLLSNELKLTL-p P06753-3;S235-p LERNRLLSNELKLTL 0.00956415249523423 0.00184906248033885 -1.22966666666667 -1.094 47.9594045005196 42.9424017553459 -1.22966666666667 -1.094 1.59977737316609e-05 5.07878495577695e-05 -14.4059209810893 -11.5373968925897 P06753 TPM3 P06753.3.S235.p_TPM3 P06753-3_S235s _1_1_235_235 P06753-3 P06753-3|P06753-4 Isoform 3 of Tropomyosin alpha-3 chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21012.21012.2 9.16 2.83 99 1 1 1 0 677.8916 1274.8084 S235s TMT10 233 (R) LLsNELK (L) LLS(1.0)NELK K:TMT10,s:Phosphorylated S TPM3 29126.1 3 5 2934.3 65.55 HUMAN 1 -47.9594 -42.9424 LERPKTLSPGKNGVV-p P04626;S1174-p LERPKTLSPGKNGVV 0.224767265517543 0.00159168462790637 0.408333333333333 -1.41733333333333 12.4545869675087 44.8580706041673 0.408333333333333 -1.41733333333333 0.0568252432209069 3.26732954253611e-05 2.4132350202055 -12.5481685323084 P04626 ERBB2 P04626.S1174.p_ERBB2 P04626_S1174s _1_1_1174_1174 P04626 P04626|P04626-4|P04626-5|B4DTR1|P04626-2|P04626-3 Receptor tyrosine-protein kinase erbB-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12751.12751.3 12.11 7.9 2.124 2 1 1 0 623.0384 1787.1358 S1174s TMT10 1172 (K) TLsPGKNGVVK (D) T(0.0)LS(0.99)PGKNGVVK K:TMT10,s:Phosphorylated S ERBB2 141274.2 2 23 521.1 283.33 HUMAN 1 12.4546 -44.8581 LESCNLPSTTKRKCA-p O15534;S645-p LESCNLPSTTKRKCA 0.171306633335012 0.0730290675877998 -0.289666666666667 0.215 15.2687968030941 15.0944950422842 -0.289666666666667 0.215 0.0297248943494924 0.0309421506143156 -2.92901792200761 2.8942893999925 O15534 PER1 O15534.S645.p_PER1 O15534_S645s _1_1_645_645 O15534 O15534|J3KRL7|O15534-4|J3KTM2 Period circadian protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17537.17537.3 15.03 15.03 1.123 5 1 1 0 650.9937 1870.9985 S645s TMT10 637 (R) YLESCNLPsTTK (R) Y(0.0)LES(0.0)CNLPS(0.99)T(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PER1 137749.7 1 3 1981.1 104.28 HUMAN 1 -15.2688 15.0945 LESEKPGSPEAAETS-p Q96T23;S622-p LESEKPGSPEAAETS 0.977139959770309 0.406977334903806 -0.005 0.082 0.196728858429825 5.1960025029596 -0.005 0.082 0.955712165213096 0.30227327379534 -0.0581552497437765 1.13962022244212 Q96T23 RSF1 Q96T23.S622.p_RSF1 Q96T23_S622s _1_1_622_622 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15504.15504.5 25.47 21.18 2.892 7 1 1 0 756.3781 3697.8834 S622s TMT10 613 (K) STLESEKPGsPEAAETSPPSNIIDHCEK (L) S(0.0)T(0.0)LES(0.0)EKPGS(0.99)PEAAET(0.0)S(0.0)PPS(0.0)NIIDHCEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RSF1 165358.1 3 9 39.1 857.38 HUMAN 1 -0.1967 5.196 LESFKKQSFVLKEGV-p J3QQX2;S101-p LESFKKQSFVLKEGV 0.19060140727462 0.034743893649904 -0.392333333333333 0.425666666666667 14.0819776589465 19.6508557323856 -0.392333333333333 0.425666666666667 0.0390662957996056 0.0108371335846698 -2.70798217101253 3.80093996478542 J3QQX2 ARHGDIA J3QQX2.S101.p_ARHGDIA J3QQX2_S101s _1_1_101_101 J3QQX2 J3QQX2|P52565|P52565-2 Rho GDP-dissociation inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15505.15505.3 7.64 7.64 99 1 1 1 0 539.6625 1537.0081 S101s TMT10 99 (K) KQsFVLK (E) KQS(1.0)FVLK K:TMT10,s:Phosphorylated S ARHGDIA 25945 1 3 3480.1 49.97 HUMAN 1 -14.082 19.6509 LESKLENSPVENVTA-p Q5FWF5;S523-p LESKLENSPVENVTA 0.579285083552818 0.974407849058974 0.0806666666666667 0.004 4.36082554656727 0.158926654098378 0.0806666666666667 0.00400000000000001 0.366367925471009 0.964067260540516 0.985503399674517 0.0471689255233117 Q5FWF5 ESCO1 Q5FWF5.S523.p_ESCO1 Q5FWF5_S523s _1_1_523_523 Q5FWF5 Q5FWF5|Q5FWF5-2 N-acetyltransferase ESCO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.31143.31143.5 20.35 16.73 5.026 7 1 1 0 787.4105 3853.062 S523s TMT10 511 (K) NFSQCLESKLENsPVENVTAASTLLSQAK (I) NFS(0.0)QCLES(0.0)KLENS(0.99)PVENVT(0.0)AAS(0.0)T(0.0)LLS(0.0)QAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ESCO1 96179.3 4 6 1971.1 104.85 HUMAN 1 4.3608 0.1589 LESLRPPSAEPGGSS-p Q8TE77;S259-p LESLRPPSAEPGGSS 0.316812819886542 0.299214222567895 -0.185 -0.103333333333333 9.34715586740653 6.91820472678514 -0.185 -0.103333333333333 0.116220947907779 0.203319731411569 -1.86847565489074 -1.44629274496457 Q8TE77 SSH3 Q8TE77.S259.p_SSH3 Q8TE77_S259s _1_1_259_259 Q8TE77 Q8TE77|Q8TE77-3|Q8TE77-2|Q8TE77-4|C9JUG3 Protein phosphatase Slingshot homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31395.31395.5 19.81 19.81 2.05 7 1 1 0 977.8423 4805.229 S259s TMT10 236 (R) LNSEQSCLNEWTAMADLESLRPPsAEPGGSSEQEQMEQAIR (A) LNS(0.0)EQS(0.0)CLNEWT(0.0)AMADLES(0.0)LRPPS(0.99)AEPGGS(0.0)S(0.0)EQEQMEQAIR C:Carbamidomethylation,s:Phosphorylated S SSH3 73336.6 2 6 930.1 199.29 HUMAN 1 -9.3472 -6.9182 LESNLPGSPNTSRGW-p Q4KWH8;S1307-p LESNLPGSPNTSRGW 0.80919587701 0.840890312283469 0.039 0.0206666666666667 1.76641724203464 1.05767718565427 0.039 0.0206666666666667 0.66582220672419 0.783848770437281 0.456428767260954 0.288255600649954 Q4KWH8 PLCH1 Q4KWH8.S1307.p_PLCH1 Q4KWH8_S1307s _1_1_1307_1307 Q4KWH8 Q4KWH8|Q4KWH8-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13338.13338.3 18.91 18.91 2.621 5 1 1 0 641.9843 1843.9711 S1307s TMT10 1297 (K) TAALESNLPGsPNTSR (G) T(0.0)AALES(0.0)NLPGS(0.99)PNT(0.0)S(0.0)R s:Phosphorylated S PLCH1 191330.6 3 12 201.1 451.38 HUMAN 1 1.7664 1.0577 LESPTPESQKSFKFH-p O43166;S1554-p LESPTPESQKSFKFH 0.560423836734948 0.0182244938667557 0.109 -0.351333333333333 4.63585456246972 23.9433042447779 0.109 -0.351333333333333 0.34388603817067 0.00403338404048839 1.03688289344939 -4.77539652828012 O43166 SIPA1L1 O43166.S1554.p_SIPA1L1 O43166_S1549sS1554s_2_2_1549_1554 O43166 O43166|O43166-2|O43166-3|F5GYF8 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22124.22124.3 8.67 8.67 1.267 3 2 2 0 811.4315 2272.3367 S1549s S1554s TMT10 1543 (K) KLIDLEsPTPEsQK (S) KLIDLES(0.99)PT(0.0)PES(0.99)QK K:TMT10,s:Phosphorylated S SIPA1L1 201223.1 1 39 46.1 777.88 HUMAN 1 4.6359 -23.9433 LESQRSESPMQEIVT-p Q9C0D7-2;S233-p LESQRSESPMQEIVT 0.731722721343798 0.177169515262384 -0.0526666666666667 -0.146333333333333 2.57449337022126 9.88522872203214 -0.0526666666666667 -0.146333333333333 0.552777888939916 0.102677935471003 -0.632577894498995 -1.9609947211796 Q9C0D7 ZC3H12C Q9C0D7.2.S233.p_ZC3H12C Q9C0D7-2_S233s _1_1_233_233 Q9C0D7-2 Q9C0D7-2|E9PP00 Isoform 2 of Probable ribonuclease ZC3H12C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24877.24877.4 25.77 25.77 1.196 5 1 1 0 1020.2466 3998 S233s TMT10 231 (R) SEsPMQEIVTDDGENLRPIVIDGSNVAMSHGNK (E) S(0.0)ES(0.99)PMQEIVT(0.0)DDGENLRPIVIDGS(0.0)NVAMS(0.0)HGNK K:TMT10,s:Phosphorylated S ZC3H12C 100617.7 4 3 1811.1 113.32 HUMAN 1 -2.5745 -9.8852 LESRRPSSPLIDIKP-p Q9BSW7;S119-p LESRRPSSPLIDIKP 0.218544112853148 0.035438870739653 0.193666666666667 0.517333333333333 12.7283471516026 19.5233208881525 0.193666666666667 0.517333333333333 0.0533537911996264 0.011160095504888 2.46222981955633 3.7739639614106 Q9BSW7 SYT17 Q9BSW7.S119.p_SYT17 Q9BSW7_S118sS119s_2_2_118_119 Q9BSW7 Q9BSW7|H3BN78|H3BRH9|H3BQZ6 Synaptotagmin-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32855.32855.4 11.37 9.74 10.237 3 2 2 0 754.4225 2854.7373 S118s S119s TMT10 116 (R) RPssPLIDIKPIEFGVLSAK (K) RPS(0.99)S(0.99)PLIDIKPIEFGVLS(0.0)AK K:TMT10,s:Phosphorylated S SYT17 54475.7 1 2 5570.1 18.12 HUMAN 1 12.7283 19.5233 LESSPTASGSSVSPG-p Q9BQL6;S174-p LESSPTASGSSVSPG 0.146674740935683 0.0334131853243202 -0.313666666666667 -0.284 16.9370009077836 19.8982542501084 -0.313666666666667 -0.284 0.0202441669043986 0.0102370441190468 -3.25023686300796 -3.8535660365432 Q9BQL6 FERMT1 Q9BQL6.S174.p_FERMT1 Q9BQL6_S174s _1_1_174_174 Q9BQL6 Q9BQL6|Q9BQL6-2|Q9BQL6-4 Fermitin family homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32541.32541.4 14.79 14.79 1.14 9 1 1 0 1004.2817 3934.1264 S174s TMT10 155 (K) NNKEPIIEDILNLESSPTAsGSSVSPGLYSK (T) NNKEPIIEDILNLES(0.0)S(0.0)PT(0.0)AS(0.99)GS(0.0)S(0.0)VS(0.0)PGLY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S FERMT1 78063 1 2 3577.1 47.87 HUMAN 1 -16.937 -19.8983 LESTDRGSWDP____-p Q5VT25-2;S1751-p LESTDRGSWDP____ 0.373737854391693 0.43878894537739 -0.129333333333333 0.0776666666666667 7.91716054773102 4.76717702156988 -0.129333333333333 0.0776666666666667 0.161541438255724 0.333643215322747 -1.62078682024237 1.06100802391432 Q5VT25 CDC42BPA Q5VT25.2.S1751.p_CDC42BPA Q5VT25-2_S1751s _1_1_1751_1751 Q5VT25-2 Q5VT25-2|Q5VT25-5|A0A0A0MRJ0|Q5VT25-4|Q5VT25-3 Isoform 2 of Serine/threonine-protein kinase MRCK alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20059.20558.2 14.11 12.76 3.156 5 1 1 0 929.9246 1778.8758 S1751s TMT10 1741 (K) SLSLESTDRGsWDP (-) S(0.0)LS(0.0)LES(0.0)T(0.0)DRGS(0.99)WDP s:Phosphorylated S CDC42BPA 201918 2 17 917.1 200.65 HUMAN 1 -7.9172 4.7672 LETCQHESDEQPLDP-p Q96R06;S97-p LETCQHESDEQPLDP 0.377043100249076 0.0348194324017945 0.320333333333333 -0.411333333333333 7.82785088125168 19.6327407308965 0.320333333333333 -0.411333333333333 0.164897819126428 0.0108824311181271 1.60528246811156 -3.79710200396685 Q96R06 SPAG5 Q96R06.S97.p_SPAG5 Q96R06_S97s _1_1_97_97 Q96R06 Q96R06 Sperm-associated antigen 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26291.26291.4 13.41 13.41 2.248 5 1 1 0 869.1733 3393.7037 S97s TMT10 89 (K) WLETCQHEsDEQPLDPIPQISSTPK (T) WLET(0.0)CQHES(0.99)DEQPLDPIPQIS(0.0)S(0.0)T(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SPAG5 135788.8 1 4 612.1 261.64 HUMAN 1 7.8279 -19.6327 LETEPLESQDRELLD-p P78345;S226-p LETEPLESQDRELLD 0.298291057314039 0.01259917503762 0.175333333333333 0.618 9.87595151248757 26.4935589134382 0.175333333333333 0.618 0.102897506039172 0.00224204388284419 1.9601668420439 5.42496533689039 P78345 RPP38 P78345.S226.p_RPP38 P78345_S226s _1_1_226_226 P78345 P78345 Ribonuclease P protein subunit p38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28516.28516.5 21.2 17.92 1.855 6 1 1 0 887.0472 4351.2284 S226s TMT10 212 (R) IEDSGENLETEPLEsQDRELLDTSFEDLSKPK (R) IEDS(0.0)GENLET(0.0)EPLES(0.99)QDRELLDT(0.0)S(0.0)FEDLS(0.0)KPK K:TMT10,s:Phosphorylated S RPP38 32062 1 3 2778.1 70.95 HUMAN 1 9.876 26.4936 LETGPKASHGYGGKF-p Q14247;S81-p LETGPKASHGYGGKF 0.376746768297789 0.980270543149773 -0.255 0.003 7.83824272724499 0.12343998716185 -0.255 0.00300000000000001 0.164503721504931 0.971977029082792 -1.60708696317075 0.0367794383738023 Q14247 CTTN Q14247.S81.p_CTTN Q14247_S81s _1_1_81_81 Q14247 Q14247-2|Q14247-3 Src substrate cortactin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8863.8863.3 16.41 16.41 3.278 3 1 1 0 766.7412 2218.2435 S81s TMT10 73 (K) ELETGPKAsHGYGGK (F) ELET(0.0)GPKAS(0.99)HGY(0.0)GGK K:TMT10,s:Phosphorylated S CTTN 61756.2 1 2 493.1 293.68 HUMAN 1 -7.8382 0.1234 LETHTALSPLQFRGT-p Q12770;S1041-p LETHTALSPLQFRGT 0.82694655009949 0.046265908128842 -0.035 -0.257 1.5896145751276 17.8605568057943 -0.035 -0.257 0.693487348454652 0.0163660667982503 -0.415871183533179 -3.43131774987615 Q12770 SCAP Q12770.S1041.p_SCAP Q12770_S1041s _1_1_1041_1041 Q12770 Q12770|Q12770-2|A0A0A0MTG6|Q12770-4|Q12770-3 Sterol regulatory element-binding protein cleavage-activating protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35195.35195.3 15.97 15.97 1.216 5 1 1 0 934.8085 2722.4402 S1041s TMT10 1025 (R) LNGSLDFFSLETHTALsPLQFR (G) LNGS(0.0)LDFFS(0.0)LET(0.0)HT(0.0)ALS(0.99)PLQFR s:Phosphorylated S SCAP 141666.3 2 7 1353.1 150.81 HUMAN 1 -1.5896 -17.8606 LETKLPLSPPLVEDS-p O96007;S20-p LETKLPLSPPLVEDS 0.311874595590947 0.283462270465917 -0.246333333333333 0.170333333333333 9.46675609329306 7.21900378237032 -0.246333333333333 0.170333333333333 0.113064011642605 0.189714105190931 -1.88919710268305 1.49886966401239 O96007 MOCS2 O96007.S20.p_MOCS2 O96007_S20s _1_1_20_20 O96007 O96007 Molybdopterin synthase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27371.27371.3 17.54 15.63 10.193 3 1 1 0 840.7892 2440.3852 S20s TMT10 17 (K) LPLsPPLVEDSAFEPSRK (D) LPLS(0.99)PPLVEDS(0.0)AFEPS(0.0)RK K:TMT10,s:Phosphorylated S MOCS2 21171.8 5 1 3231.1 56.51 HUMAN 1 -9.4668 7.219 LETKYRWTEYGLTFT-p P21796;T65-p LETKYRWTEYGLTFT 0.995213264133306 0.176862651260684 -0.001 0.217666666666667 0.0404321617530444 9.89553939155202 -0.000999999999999997 0.217666666666667 0.990733353180466 0.102434454933411 -0.0121604560374598 1.96278326048104 P21796 VDAC1 P21796.T65.p_VDAC1 P21796_T65t _1_1_65_65 P21796 P21796 Voltage-dependent anion-selective channel protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24927.24927.3 12.89 12.89 3.744 5 1 1 0 744.7093 2152.1479 T65t TMT10 62 (K) YRWtEYGLTFTEK (W) Y(0.0)RWT(0.99)EY(0.0)GLT(0.0)FT(0.0)EK K:TMT10,t:Phosphorylated T VDAC1 30886.1 1 5 1468.1 139.85 HUMAN 1 -0.0404 9.8955 LETLPSFSSDEEDSV-p Q9ULL5-3;S1381-p LETLPSFSSDEEDSV 0.814137925555095 0.0820618228869866 0.0346666666666667 0.19 1.71634775887504 14.3912261042052 0.0346666666666667 0.19 0.673542840497657 0.0363812309798605 0.445026814060142 2.76332153155538 Q9ULL5 PRR12 Q9ULL5.3.S1381.p_PRR12 Q9ULL5-3_S1381sS1382s_2_2_1381_1382 Q9ULL5-3 Q9ULL5-3|Q9ULL5-2 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26558.26972.3 14.09 14.09 1.115 5 2 2 0 862.7283 2426.2339 S1381s S1382s TMT10 1373 (R) NLETLPSFssDEEDSVAK (N) NLET(0.0)LPS(0.0)FS(0.99)S(0.99)DEEDS(0.0)VAK K:TMT10,s:Phosphorylated S PRR12 212010 9 24 182.1 477.91 HUMAN 1 1.7163 14.3912 LETLRNSSPEDLFDE-p Q13426;S328-p LETLRNSSPEDLFDE 0.362971528924294 0.114060155754848 0.130666666666667 0.196666666666667 8.17248705660533 12.4340831768688 0.130666666666667 0.196666666666667 0.152318023054057 0.0570941592833375 1.66506994178806 2.40832090497522 Q13426 XRCC4 Q13426.S328.p_XRCC4 Q13426_S327sS328s_2_2_327_328 Q13426 Q13426|Q13426-2 DNA repair protein XRCC4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32381.33009.3 8.62 8.62 2.592 5 2 2 0 1089.1443 3105.4884 S327s S328s TMT10 312 (K) EHISAENMSLETLRNssPEDLFDEI (-) EHIS(0.0)AENMS(0.0)LET(0.0)LRNS(0.99)S(0.99)PEDLFDEI s:Phosphorylated S XRCC4 38571.3 3 4 3571.1 48.01 HUMAN 1 8.1725 12.4341 LETPGRPSQQKRKPS-p Q92547;S853-p LETPGRPSQQKRKPS 0.807840650085328 0.0224755319034756 0.038 -0.338 1.77991641303783 22.5123653148831 0.038 -0.338 0.6637558453284 0.00560742493492596 0.459491855845858 -4.43525637402742 Q92547 TOPBP1 Q92547.S853.p_TOPBP1 Q92547_S853s _1_1_853_853 Q92547 Q92547 DNA topoisomerase 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17473.17473.4 12.58 9.55 1.137 2 1 1 0 555.7999 2140.2126 S853s TMT10 841 (K) DALAALETPGRPsQQK (R) DALAALET(0.0)PGRPS(0.99)QQK K:TMT10,s:Phosphorylated S TOPBP1 172786.5 2 8 1135.1 173.67 HUMAN 1 1.7799 -22.5124 LETSSALSPSLKNKS-p Q7Z333-4;S1621-p LETSSALSPSLKNKS 0.441027182521617 0.0113061561638133 -0.121333333333333 -0.428666666666667 6.54858283610702 27.2546931351894 -0.121333333333333 -0.428666666666667 0.221381699133218 0.00188161465308958 -1.38173982024298 -5.63056780699713 Q7Z333 SETX Q7Z333.4.S1621.p_SETX Q7Z333-4_S1621s _1_1_1621_1621 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18780.18780.3 13.44 13.44 3.666 6 1 1 0 620.0038 1778.0312 S1621s TMT10 1613 (K) SLETSSALsPSLK (N) S(0.0)LET(0.0)S(0.0)S(0.0)ALS(0.99)PS(0.0)LK K:TMT10,s:Phosphorylated S SETX 310728.6 2 14 192.1 463.82 HUMAN 1 -6.5486 -27.2547 LEVEESNSEDEASFK-p Q03111;S361-p LEVEESNSEDEASFK 0.185461409283341 0.46739242321659 -0.218 0.127333333333333 14.3802842803539 4.40375193398552 -0.218 0.127333333333333 0.0364730071653931 0.362764521744118 -2.76301072646832 0.993381326920392 Q03111 MLLT1 Q03111.S361.p_MLLT1 Q03111_S361s _1_1_361_361 Q03111 Q03111 Protein ENL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19052.19052.3 15.37 15.37 2.428 3 1 1 0 774.704 2242.1127 S361s TMT10 353 (K) ALEVEESNsEDEASFK (S) ALEVEES(0.0)NS(0.99)EDEAS(0.0)FK K:TMT10,s:Phosphorylated S MLLT1 62454.4 1 6 685.1 243.68 HUMAN 1 -14.3803 4.4038 LEVNGRESEEENLNK-p O95793;S176-p LEVNGRESEEENLNK 0.211326647923701 0.0804080974031953 -0.259 0.368 13.0301921984962 14.522706606997 -0.259 0.368 0.0497715057942804 0.0352963127801128 -2.51650882129948 2.78765597774896 O95793 STAU1 O95793.S176.p_STAU1 O95793_S176s _1_1_176_176 O95793 O95793|O95793-3|O95793-2|Q5JW30|A0A087X1A5 Double-stranded RNA-binding protein Staufen homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19564.19766.4 16.39 12.97 99 1 1 1 0 872.703 3407.8171 S176s TMT10 159 (R) ILQNEPLPERLEVNGREsEEENLNK (S) ILQNEPLPERLEVNGRES(1.0)EEENLNK K:TMT10,s:Phosphorylated S STAU1 63466.4 7 2 1249.1 162.06 HUMAN 1 -13.0302 14.5227 LEVPAERSPRRRSIS-p Q9UJF2-2;S159-p LEVPAERSPRRRSIS 0.701827372599506 0.043289637080351 0.0566666666666667 -0.298 2.88997596149376 18.2695128454961 0.0566666666666667 -0.298 0.51404649685821 0.0148952815090242 0.697975187147914 -3.51408495148671 Q9UJF2 RASAL2 Q9UJF2.2.S159.p_RASAL2 Q9UJF2-2_S159s _1_1_159_159 Q9UJF2-2 Q9UJF2-2 Isoform 2 of Ras GTPase-activating protein nGAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9584.9584.3 10.79 4.85 99 1 1 1 0 488.259 1382.7953 S159s TMT10 152 (K) LEVPAERsPR (R) LEVPAERS(1.0)PR s:Phosphorylated S RASAL2 145265.6 7 31 281.2 388.28 HUMAN 1 2.89 -18.2695 LEVVRSPSPPLPLSC-p Q96HJ3;S52-p LEVVRSPSPPLPLSC 0.892128262966074 0.313720410774928 0.0203333333333333 -0.136666666666667 0.969556502468153 6.6544741020324 0.0203333333333333 -0.136666666666667 0.799915937516351 0.216049163823027 0.266224466241518 -1.40001673493233 Q96HJ3 CCDC34 Q96HJ3.S52.p_CCDC34 Q96HJ3_S52s _1_1_52_52 Q96HJ3 Q96HJ3|Q96HJ3-2 Coiled-coil domain-containing protein 34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19519.19519.4 15.59 14.99 1.506 6 1 1 0 687.5996 2667.4086 S52s TMT10 42 (R) GQGLEVVRSPsPPLPLSCSNSTR (S) GQGLEVVRS(0.0)PS(0.99)PPLPLS(0.0)CS(0.0)NS(0.0)T(0.0)R C:Carbamidomethylation,s:Phosphorylated S CCDC34 43624.1 3 1 5893.1 15.59 HUMAN 1 0.9696 -6.6545 LEVVVPGSPGDCLPE-p O60343-2;S262-p LEVVVPGSPGDCLPE 0.74843463214063 0.990144326100283 -0.062 -0.00266666666666665 2.39200112706856 0.0652968037259482 -0.062 -0.0026666666666667 0.576500764158013 0.98507731875972 -0.593964065722585 -0.019581894245227 O60343 TBC1D4 O60343.2.S262.p_TBC1D4 O60343-2_S262s _1_1_262_262 O60343-2 O60343-2 Isoform 2 of TBC1 domain family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30873.30873.5 32.37 27.46 4.979 7 1 1 0 1036.0876 5096.448 S262s TMT10 245 (R) GPDPGEDLADLEVVVPGsPGDCLPEEADGTDTHLGLPAGASQPALTSSR (V) GPDPGEDLADLEVVVPGS(0.99)PGDCLPEEADGT(0.0)DT(0.0)HLGLPAGAS(0.0)QPALT(0.0)S(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S TBC1D4 141150.8 1 2 603.1 262.97 HUMAN 1 -2.392 -0.0653 LEYQDAPSPEDLEET-p Q8WYP5-2;S1361-p LEYQDAPSPEDLEET 0.304557287260952 0.0727841803049565 -0.153 -0.211 9.67491145842452 15.1193786663923 -0.153 -0.211 0.107772722558154 0.0307653693524388 -1.92528262539232 -2.89896068397857 Q8WYP5 AHCTF1 Q8WYP5.2.S1361.p_AHCTF1 Q8WYP5-2_S1361s _1_1_1361_1361 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28674.28674.5 24.65 24.65 2.612 12 1 1 0 928.8548 4560.2972 S1361s TMT10 1341 (K) GNSSVSITSDETTLEYQDAPsPEDLEETVFTASKPK (S) GNS(0.0)S(0.0)VS(0.0)IT(0.0)S(0.0)DET(0.0)T(0.0)LEY(0.0)QDAPS(0.99)PEDLEET(0.0)VFT(0.0)AS(0.0)KPK K:TMT10,s:Phosphorylated S AHCTF1 258049.6 2 20 40.1 829.79 HUMAN 1 -9.6749 -15.1194 LEYRQLHTLQKLRMD-p Q9H2K8;T666-p LEYRQLHTLQKLRMD 0.948754976233882 0.0374138873572216 0.0106666666666667 0.439666666666667 0.452631182755625 19.1728184424493 0.0106666666666667 0.439666666666667 0.901025084162196 0.0120981274612182 0.130314499130515 3.70035279142079 Q9H2K8 TAOK3 Q9H2K8.T666.p_TAOK3 Q9H2K8_T666t _1_1_666_666 Q9H2K8 Q9H2K8 Serine/threonine-protein kinase TAO3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8751.8751.2 11.24 11.24 99 1 1 1 0 703.4002 1325.8305 T666t TMT10 663 (R) QLHtLQK (L) QLHT(1.0)LQK K:TMT10,t:Phosphorylated T TAOK3 105860.4 1 14 1125.2 174.76 HUMAN 1 0.4526 19.1728 LEYSSPATPRLQYRS-p Q5GH72;T558-p LEYSSPATPRLQYRS 0.222927229268876 0.850806845736898 -0.218666666666667 -0.0393333333333333 12.5400492978071 0.986643015812854 -0.218666666666667 -0.0393333333333332 0.0557179424218899 0.796774998943669 -2.42850709897955 -0.270498009817413 Q5GH72 XKR7 Q5GH72.T558.p_XKR7 Q5GH72_T558t _1_1_558_558 Q5GH72 Q5GH72 XK-related protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23960.23960.3 13.69 13.69 2.237 5 1 1 0 609.9871 1747.9792 T558t TMT10 547 (K) TILALEYSSPAtPR (L) T(0.0)ILALEY(0.0)S(0.0)S(0.0)PAT(0.99)PR t:Phosphorylated T XKR7 64680.4 1 2 4701.1 27.76 HUMAN 1 -12.54 -0.9866 LFAGQHISKSPFEVS-p O75369-8;S339-p LFAGQHISKSPFEVS 0.0393397491225838 0.189277432033007 -0.786333333333333 0.289 31.6931600155133 9.5058458718994 -0.786333333333333 0.289 0.000677148621123091 0.112050916420555 -6.96427601222399 1.89524727485894 O75369 FLNB O75369.8.S339.p_FLNB O75369-8_S339s _1_1_339_339 O75369-8 O75369-8 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22607.22607.3 17.92 17.92 17.917 2 1 1 0 613.3516 1758.0678 S339s TMT10 329 (K) VTVLFAGQHIsK (S) VT(0.0)VLFAGQHIS(0.99)K K:TMT10,s:Phosphorylated S FLNB 283797.6 1 3 67.1 680.07 HUMAN 1 -31.6932 9.5058 LFDEEEDSSEKLFDD-p O43719;S713-p LFDEEEDSSEKLFDD 0.0874983319438344 0.00278494099914611 -0.750333333333333 0.915333333333333 22.5409871073552 38.6763643240229 -0.750333333333333 0.920533163271949 0.00557059120647747 0.000135632437783915 -4.44674783609098 9.55165718125334 O43719 HTATSF1 O43719.S713.p_HTATSF1 O43719_S713s _1_1_713_713 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18392.18392.3 11.45 8.25 1.139 2 1 1 0 622.62 1785.8795 S713s TMT10 706 (K) LFDEEEDsSEK (L) LFDEEEDS(0.99)S(0.0)EK K:TMT10,s:Phosphorylated S HTATSF1 86421.8 2 16 149.1 512 HUMAN 1 -22.541 38.6764 LFDGDDMSNAGDFLN-p O75717;S333-p LFDGDDMSNAGDFLN 0.208780305282843 0.163279147003995 0.222333333333333 -0.179333333333333 13.1306749290967 10.3474533177068 0.222333333333333 -0.179333333333333 0.0486331619912348 0.0923112577322931 2.53464072804705 -2.04128693133386 O75717 WDHD1 O75717.S333.p_WDHD1 O75717_S333s _1_1_333_333 O75717 O75717|O75717-2 WD repeat and HMG-box DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35874.35874.4 23.89 19.13 8.179 4 1 1 0 966.6817 3783.7372 S333s TMT10 322 (K) DYNDLFDGDDMsNAGDFLNDNAVEIPSFSK (G) DY(0.0)NDLFDGDDMS(0.99)NAGDFLNDNAVEIPS(0.0)FS(0.0)K K:TMT10,s:Phosphorylated S WDHD1 127448.5 14 2 554.1 273.24 HUMAN 1 13.1307 -10.3475 LFDQHEESEEEENQN-p O15042;S788-p LFDQHEESEEEENQN 0.733645174784926 0.320162626174638 -0.0723333333333333 0.181 2.54636312820721 6.54290047141531 -0.0723333333333334 0.181 0.556369977965016 0.22167154736641 -0.626665146080908 1.38038163766893 O15042 U2SURP O15042.S788.p_U2SURP O15042_S788sS800s_2_2_788_800 O15042 O15042|O15042-2|E7ET15|O15042-3 U2 snRNP-associated SURP motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23599.23599.4 13.34 13.34 3.749 5 2 2 0 1140.9583 4400.8599 S788s S800s TMT10 779 (K) WELFDQHEEsEEEENQNQEEEsEDEEDTQSSK (S) WELFDQHEES(0.99)EEEENQNQEEES(0.99)EDEEDT(0.0)QS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S U2SURP 118746.2 1 19 360.1 345.29 HUMAN 1 -2.5464 6.5429 LFEEEMDSNPMVSSL-p A0A0G2JNW7;S78-p LFEEEMDSNPMVSSL 0.301007467611603 0.130564668304362 -0.147333333333333 -0.173666666666667 9.79020454883375 11.6526391052346 -0.147333333333333 -0.173666666666667 0.104949299730261 0.0683496176536921 -1.94528380453332 -2.26977547445485 A0A0G2JNW7 NotFound A0A0G2JNW7.S78.p_NotFound A0A0G2JNW7_S78s _1_1_78_78 A0A0G2JNW7 Q9Y666|A0A0G2JNW7|Q9Y666-2 Solute carrier family 12 member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37154.37154.3 24.24 24.24 4.503 3 1 1 0 979.8016 2857.4186 S78s TMT10 68 (K) NMALFEEEMDsNPMVSSLLNK (L) NMALFEEEMDS(0.99)NPMVS(0.0)S(0.0)LLNK K:TMT10,s:Phosphorylated S SLC12A7 120389 7 4 1247.2 162.14 HUMAN 1 -9.7902 -11.6526 LFELTGLSGSKNKSV-p Q9Y6Q5-2;S226-p LFELTGLSGSKNKSV 0.744043857023488 0.04878386741905 -0.0576666666666667 0.300333333333333 2.4382236768926 17.5454056803632 -0.0576666666666667 0.300333333333333 0.570397524869932 0.01759784272289 -0.603802401321293 3.36817126374008 Q9Y6Q5 AP1M2 Q9Y6Q5.2.S226.p_AP1M2 Q9Y6Q5-2_S226s _1_1_226_226 Q9Y6Q5-2 Q9Y6Q5-2 Isoform 2 of AP-1 complex subunit mu-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.32487.32487.3 17.13 17.13 2.218 3 1 1 0 597.0019 1709.0249 S226s TMT10 218 (R) VLFELTGLsGSK (N) VLFELT(0.0)GLS(0.99)GS(0.0)K K:TMT10,s:Phosphorylated S AP1M2 48322.8 6 5 4110.1 37.43 HUMAN 1 -2.4382 17.5454 LFFDELDSIAKARGG-p P55072;S581-p LFFDELDSIAKARGG 0.307433256565227 0.249012852501049 0.146333333333333 0.127333333333333 9.57407470204432 7.95388727224814 0.146333333333333 0.127333333333333 0.11030432206982 0.160181100383233 1.90779794924525 1.62664778562481 P55072 VCP P55072.S581.p_VCP P55072_S581s _1_1_581_581 P55072 P55072 Transitional endoplasmic reticulum ATPase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36417.36417.3 17.76 17.79 99 1 1 1 0 821.4197 2382.2779 S581s TMT10 568 (R) QAAPCVLFFDELDsIAK (A) QAAPCVLFFDELDS(1.0)IAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VCP 90004.9 2 10 803.1 222.64 HUMAN 1 9.5741 7.9539 LFFEKAPSRQISLPD-p Q15390;S115-p LFFEKAPSRQISLPD 0.572719143373661 0.104872667825532 0.0903333333333333 0.247 4.45540681181092 12.9378473611312 0.0903333333333333 0.247 0.358475367641767 0.0508411381039418 1.00323997534064 2.4985103545596 Q15390 MTFR1 Q15390.S115.p_MTFR1 Q15390_S115sS119s_2_2_115_119 Q15390 Q15390|Q15390-2 Mitochondrial fission regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24423.24423.3 9.15 9.15 1.563 3 2 2 0 918.7994 2594.4554 S115s S119s TMT10 113 (K) APsRQIsLPDLSQEEPQLK (T) APS(0.99)RQIS(0.99)LPDLS(0.0)QEEPQLK K:TMT10,s:Phosphorylated S MTFR1 37171 2 5 2235.1 92.35 HUMAN 1 4.4554 12.9378 LFGETELSPTATPRT-p Q8NCF5;S314-p LFGETELSPTATPRT 0.32916187100864 0.272100437355286 0.147 0.169333333333333 9.0224417567849 7.44500090527441 0.147 0.169333333333333 0.125243681279253 0.180094275904052 1.81224779569008 1.53825272212724 Q8NCF5 NFATC2IP Q8NCF5.S314.p_NFATC2IP Q8NCF5_S314s _1_1_314_314 Q8NCF5 Q8NCF5|H3BSZ7|Q8NCF5-2|Q8NCF5-3 NFATC2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37040.37040.3 23.04 23.04 2.711 4 1 1 0 723.058 2087.195 S314s TMT10 304 (R) ILLLFGETELsPTATPR (T) ILLLFGET(0.0)ELS(0.99)PT(0.0)AT(0.0)PR s:Phosphorylated S NFATC2IP 45987.1 5 10 477.1 300.69 HUMAN 1 9.0224 7.445 LFGGEPLSYTRFSLA-p P02786;S19-p LFGGEPLSYTRFSLA 0.306735184126758 0.0377617688688658 -0.145 -0.336333333333333 9.6009129983125 19.1141734678958 -0.145 -0.336333333333333 0.109624771255078 0.0122626025748036 -1.91245086978338 -3.68811084108021 P02786 TFRC P02786.S19.p_TFRC P02786_S19s _1_1_19_19 P02786 P02786|F8WBE5 Transferrin receptor protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28684.28684.3 17.88 17.88 2.111 5 1 1 0 685.6644 1975.0123 S19s TMT10 7 (R) SAFSNLFGGEPLsYTR (F) S(0.0)AFS(0.0)NLFGGEPLS(0.99)Y(0.0)T(0.0)R s:Phosphorylated S TFRC 85326.2 5 2 3387.1 52.22 HUMAN 1 -9.6009 -19.1142 LFGLPNDS_______-p Q96J01;S351-p LFGLPNDS_______ 0.98042904864912 0.0436038470119124 -0.00400000000000001 0.242666666666667 0.171431618061135 18.2223745971054 -0.00400000000000001 0.242666666666667 0.96129534259817 0.0150578352201444 -0.0508158472495763 3.50449639209485 Q96J01 THOC3 Q96J01.S351.p_THOC3 Q96J01_S351s _1_1_351_351 Q96J01 Q96J01|D6REC9 THO complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29532.29532.2 10.09 10.09 99 1 1 1 0 586.2819 1091.5934 S351s TMT10 344 (K) LFGLPNDs (-) LFGLPNDS(1.0) s:Phosphorylated S THOC3 39455.6 1 1 6693.1 10.09 HUMAN 1 -0.1714 18.2224 LFGMPGGSGGRKMAA-p Q92995;S14-p LFGMPGGSGGRKMAA 0.306028128698442 0.0136973443304448 -0.188 -0.434 9.63774162239566 25.8886481697919 -0.188 -0.434 0.108699072343954 0.00257712321436352 -1.91883664829008 -5.26554394940388 Q92995 USP13 Q92995.S14.p_USP13 Q92995_S14s _1_1_14_14 Q92995 Q92995 Ubiquitin carboxyl-terminal hydrolase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17706.17706.3 9.89 9.89 99 1 1 1 0 610.6556 1749.9834 S14s TMT10 5 (R) GALFGMPGGsGGRK (M) GALFGMPGGS(1.0)GGRK K:TMT10,s:Phosphorylated S USP13 98067.1 1 1 1969.1 104.91 HUMAN 1 -9.6377 -25.8886 LFHVRPVTQTDVYRA-p O75116;T1212-p LFHVRPVTQTDVYRA 0.503727443653237 0.76007061003343 -0.091 0.038 5.49613778989949 1.64584364902055 -0.091 0.0380000000000001 0.282089045301484 0.684566488091202 -1.19425117822013 0.428813576950442 O75116 ROCK2 O75116.T1212.p_ROCK2 O75116_T1212t _1_1_1212_1212 O75116 O75116|E9PF63|Q14DU5 Rho-associated protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15683.15683.4 15.38 15.38 1.14 3 1 1 0 664.361 2574.4557 T1212t TMT10 1205 (K) LFHVRPVtQTDVYRADAK (E) LFHVRPVT(0.99)QT(0.0)DVY(0.0)RADAK K:TMT10,t:Phosphorylated T ROCK2 162038.1 1 2 2795.1 70.25 HUMAN 1 -5.4961 1.6458 LFIPGCKTPDQLKKE-p Q9BVC3;T100-p LFIPGCKTPDQLKKE 0.194002306690035 0.0811046262107646 -0.452333333333333 0.223666666666667 13.8928872582405 14.4636773193138 -0.452333333333334 0.223666666666667 0.0408048019376535 0.0357793352985288 -2.67327340605621 2.77672247565998 Q9BVC3 DSCC1 Q9BVC3.T100.p_DSCC1 Q9BVC3_T100t _1_1_100_100 Q9BVC3 Q9BVC3 Sister chromatid cohesion protein DCC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.32037.32037.4 19.83 14.34 10.856 3 1 1 0 783.1741 3049.7033 T100t TMT10 85 (K) IADTSNMLLFIPGCKtPDQLK (K) IADT(0.0)S(0.0)NMLLFIPGCKT(0.99)PDQLK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T DSCC1 45509 5 1 4289.1 34.13 HUMAN 1 -13.8929 14.4637 LFKEENPYARFENN_-p P53801;Y174-p LFKEENPYARFENN_ 0.4319622910657 0.208804533816764 0.133333333333333 -0.266 6.71267800407862 8.94950685204426 0.133333333333333 -0.266 0.213173001222582 0.127364769742907 1.4106192179001 -1.79897896177085 P53801 PTTG1IP P53801.Y174.p_PTTG1IP P53801_Y174y _1_1_174_174 P53801 P53801|A8MXQ1 Pituitary tumor-transforming gene 1 protein-interacting protein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.18881.19000.3 18.3 13.06 13.06 2 1 1 0 675.68 1945.0584 Y174y TMT10 165 (K) YGLFKEENPyAR (F) Y(0.0)GLFKEENPY(0.99)AR K:TMT10,y:Phosphorylated Y PTTG1IP 21122.2 14 1 18.1 80.51 HUMAN 1 6.7127 -8.9495 LFKPGEGSPDMGGAI-p Q86V15;S356-p LFKPGEGSPDMGGAI 0.57811812524001 0.198677250087978 0.0736666666666667 -0.239666666666667 4.37803514546483 9.23622296781583 0.0736666666666667 -0.239666666666667 0.364919007875 0.11922784744553 0.98873611923149 -1.84857801244001 Q86V15 CASZ1 Q86V15.S356.p_CASZ1 Q86V15_S356s _1_1_356_356 Q86V15 Q86V15|Q86V15-2 Zinc finger protein castor homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27033.27033.4 22.17 22.17 22.166 2 1 1 0 751.4023 2922.6155 S356s TMT10 346 (K) YLHLFKPGEGsPDMGGAIAFK (T) Y(0.0)LHLFKPGEGS(0.99)PDMGGAIAFK K:TMT10,s:Phosphorylated S CASZ1 193374.5 1 3 530.1 281.17 HUMAN 1 4.378 -9.2362 LFKPPEDSQDDESDS-p Q13769;S307-p LFKPPEDSQDDESDS 0.119225204869155 0.403377805005573 0.325666666666667 0.0996666666666667 19.2159076587973 5.24481720989227 0.325666666666667 0.0996666666666667 0.0119786874705686 0.298894744605444 3.71265965712438 1.1484969307045 Q13769 THOC5 Q13769.S307.p_THOC5 Q13769_S307sS312sS314s_3_3_307_314 Q13769 Q13769 THO complex subunit 5 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21321.21733.4 13.7 13.7 5.644 5 3 3 0 935.3965 3498.6851 S307s S312s S314s TMT10 299 (K) ALFKPPEDsQDDEsDsDAEEEQTTK (R) ALFKPPEDS(0.99)QDDES(0.99)DS(0.99)DAEEEQT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S THOC5 79248.1 3 7 2086.1 98.12 HUMAN 1 19.2159 5.2448 LFLTDLYSPEYPGPS-p E7EPK1;S77-p LFLTDLYSPEYPGPS 0.474773316010134 0.809588887741656 0.103666666666667 0.0256666666666667 5.95691211982228 1.28531521480345 0.103666666666667 0.0256666666666667 0.253693177499768 0.743821073752207 1.27688401884118 0.343955793919885 E7EPK1 NotFound E7EPK1.S77.p_NotFound E7EPK1_S77s _1_1_77_77 E7EPK1 Q16181|E7EPK1|Q16181-2|E7ES33|G3V1Q4 Septin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.33462.33462.3 21.88 21.88 1.143 8 1 1 0 972.8171 2836.4719 S77s TMT10 64 (K) STLINSLFLTDLYsPEYPGPSHR (I) S(0.0)T(0.0)LINS(0.0)LFLT(0.0)DLY(0.0)S(0.99)PEY(0.0)PGPS(0.0)HR s:Phosphorylated S SEPT7 50979.3 4 1 1055.1 182.7 HUMAN 1 5.9569 1.2853 LFMSRAPSEIDPREN-p O95801;S51-p LFMSRAPSEIDPREN 0.42925899542491 0.856030800980723 0.153666666666667 0.0206666666666667 6.76302563301969 0.951896763917417 0.153666666666667 0.0206666666666667 0.210715962722368 0.803175261964032 1.41946495421376 0.261742711876828 O95801 TTC4 O95801.S51.p_TTC4 O95801_S51s _1_1_51_51 O95801 O95801 Tetratricopeptide repeat protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29908.29908.5 20.61 17.08 8.906 3 1 1 0 845.2104 4142.0752 S51s TMT10 49 (R) APsEIDPRENPDLACLQSIIFDEERSPEEQAK (T) APS(0.99)EIDPRENPDLACLQS(0.0)IIFDEERS(0.0)PEEQAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TTC4 45191.2 6 2 2900.1 66.52 HUMAN 1 6.763 0.9519 LFNPPEESEK_____-p Q9NRP2;S77-p LFNPPEESEK_____ 0.652911308934577 0.00547470521432943 0.0656666666666667 0.516666666666667 3.47102651486909 32.8083598660444 0.0656666666666667 0.515660669417236 0.449673555788154 0.000523798214147212 0.81456170199598 7.32115976107589 Q9NRP2 CMC2 Q9NRP2.S77.p_CMC2 Q9NRP2_S77s _1_1_77_77 Q9NRP2 Q9NRP2|H3BPP2 COX assembly mitochondrial protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20143.20143.2 10.24 7.72 99 1 1 1 0 864.4375 1647.8994 S77s TMT10 70 (K) LFNPPEEsEK (-) LFNPPEES(1.0)EK K:TMT10,s:Phosphorylated S CMC2 9687.9 2 1 6668.1 10.24 HUMAN 1 3.471 32.8084 LFNQELLSPSKRSLK-p Q7Z2Z1;S923-p LFNQELLSPSKRSLK 0.36371578203964 0.000952253650599092 0.199666666666667 -1.35166666666667 8.15291133471256 54.9752603786921 0.199666666666667 -1.35120939518965 0.153006142646215 3.18034300702651e-06 1.66167669299733 -19.4474048403167 Q7Z2Z1 TICRR Q7Z2Z1.S923.p_TICRR Q7Z2Z1_S923s _1_1_923_923 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20782.20782.3 17.14 17.14 2 2 1 1 0 695.3826 2004.1642 S923s TMT10 915 (R) NLFNQELLsPSKR (S) NLFNQELLS(0.99)PS(0.0)KR K:TMT10,s:Phosphorylated S TICRR 212850 5 7 238.1 417.32 HUMAN 1 8.1529 -54.9753 LFNQINIS_______-p Q92905;S334-p LFNQINIS_______ 0.435048063020442 0.840425461586741 -0.167 -0.024 6.65779208497954 1.06124215969043 -0.167 -0.024 0.215884166636236 0.783205599954717 -1.40096826698036 -0.289141887881807 Q92905 COPS5 Q92905.S334.p_COPS5 Q92905_S334s _1_1_334_334 Q92905 Q92905 COP9 signalosome complex subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28479.28479.2 10.27 10.27 99 1 1 1 0 629.3271 1177.6778 S334s TMT10 327 (K) LFNQINIs (-) LFNQINIS(1.0) s:Phosphorylated S COPS5 37806.4 1 3 2859.1 67.95 HUMAN 1 -6.6578 -1.0612 LFNRLVPSVNGVRRF-p F5H2F4;S538-p LFNRLVPSVNGVRRF 0.506609842161293 0.781357363039521 0.09 0.0276666666666667 5.44553230972619 1.4831530637789 0.09 0.0276666666666667 0.285395268666632 0.710697345981597 1.18511395441748 0.390994650514097 F5H2F4 NotFound F5H2F4.S538.p_NotFound F5H2F4_S538s _1_1_538_538 F5H2F4 F5H2F4|P11586 C-1-tetrahydrofolate synthase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12850.12850.3 9.01 4.87 99 1 1 1 0 469.2677 1325.8215 S538s TMT10 535 (R) LVPsVNGVRR (F) LVPS(1.0)VNGVRR s:Phosphorylated S MTHFD1 111409.8 1 5 1887.1 109.02 HUMAN 1 5.4455 1.4832 LFPEFDDSDYDEVPE-p Q96P48;S229-p LFPEFDDSDYDEVPE 0.787952750145453 0.505820337782791 0.04 0.088 1.9970943739639 3.96684876177693 0.04 0.0880000000000001 0.631379624658722 0.401157691835975 0.508158472495762 0.910634100355461 Q96P48 ARAP1 Q96P48.S229.p_ARAP1 Q96P48_S229s _1_1_229_229 Q96P48 Q96P48|Q96P48-3 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29509.29922.3 23.54 23.54 3.867 2 1 1 0 954.4189 2781.2729 S229s TMT10 222 (R) LFPEFDDsDYDEVPEEGPGAPAR (V) LFPEFDDS(0.99)DY(0.0)DEVPEEGPGAPAR s:Phosphorylated S ARAP1 163843.1 4 1 3575.1 47.93 HUMAN 1 1.9971 3.9668 LFPGLSPSALKAKLR-p Q9C0C2;S1654-p LFPGLSPSALKAKLR 0.801789763948685 0.747393389834427 -0.0396666666666667 -0.039 1.84672803174457 1.74546034524949 -0.0396666666666667 -0.039 0.653622805655738 0.669042898803052 -0.474584811018322 -0.451614176717033 Q9C0C2 TNKS1BP1 Q9C0C2.S1654.p_TNKS1BP1 Q9C0C2_S1654s _1_1_1654_1654 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.32926.33130.3 17.19 17.78 1.869 2 1 1 0 627.6933 1801.0988 S1654s TMT10 1645 (K) VNLFPGLSPsALK (A) VNLFPGLS(0.0)PS(0.99)ALK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 2 68 4.1 2105.7 HUMAN 1 -1.8467 -1.7455 LFPKVNLSPVTPAKD-p Q6ZU35;S556-p LFPKVNLSPVTPAKD 0.153650540414552 0.13364299756999 -0.255 -0.173666666666667 16.3477731874691 11.5218429512649 -0.255 -0.173666666666667 0.0231858318145254 0.0704394092231856 -3.13525441216233 -2.24672956693861 Q6ZU35 KIAA1211 Q6ZU35.S556.p_KIAA1211 Q6ZU35_S556s _1_1_556_556 Q6ZU35 Q6ZU35|F5H1N7 Uncharacterized protein KIAA1211 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18791.18791.3 12.11 12.11 1.112 2 1 1 0 521.97 1483.9248 S556s TMT10 553 (K) VNLsPVTPAK (D) VNLS(0.99)PVT(0.0)PAK K:TMT10,s:Phosphorylated S KIAA1211 137328.5 2 1 3080.1 61.27 HUMAN 1 -16.3478 -11.5218 LFPRGTQSTEGSPVS-p Q9H4H8;S458-p LFPRGTQSTEGSPVS 0.874014922757569 0.00363879152855353 0.026 -0.630333333333333 1.14494908752001 36.2353148596878 0.026 -0.630333333333334 0.768254461897923 0.000237940578987155 0.30985234003769 -8.56028908224873 Q9H4H8 FAM83D Q9H4H8.S458.p_FAM83D Q9H4H8_S458s _1_1_458_458 Q9H4H8 A0A087WXK8|Q9H4H8|Q9H4H8-2 Protein FAM83D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7976.7976.2 15.14 7.92 1.1 5 1 1 0 858.4348 1635.8954 S458s TMT10 455 (R) GTQsTEGSPVSK (M) GT(0.0)QS(0.99)T(0.0)EGS(0.0)PVS(0.0)K K:TMT10,s:Phosphorylated S FAM83D 64879.8 4 6 1311.1 155.21 HUMAN 1 1.1449 -36.2353 LFPSPDPSGL_____-p Q07960;S437-p LFPSPDPSGL_____ 0.739518686238053 0.744688586115398 0.0486666666666667 0.0636666666666667 2.4834672133075 1.76666071531624 0.0486666666666667 0.0636666666666667 0.564486134335505 0.665784880582508 0.613393719746774 0.456433250226323 Q07960 ARHGAP1 Q07960.S437.p_ARHGAP1 Q07960_S437s _1_1_437_437 Q07960 Q07960 Rho GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.34599.34599.3 18.04 12.02 1.125 2 1 1 0 760.0364 2198.1331 S437s TMT10 422 (K) FLLDHQGELFPSPDPsGL (-) FLLDHQGELFPS(0.0)PDPS(0.99)GL s:Phosphorylated S ARHGAP1 50491.8 1 8 951.1 196.28 HUMAN 1 2.4835 1.7667 LFPVCHDSDESDTAK-p Q9Y6K1;S390-p LFPVCHDSDESDTAK 0.810690999381857 0.316489663890897 0.036 -0.126666666666667 1.75136443410854 6.60163441573681 0.036 -0.126666666666667 0.668133975227274 0.218693844073596 0.453007676562898 -1.39072237120852 Q9Y6K1 DNMT3A Q9Y6K1.S390.p_DNMT3A Q9Y6K1_S390s _1_1_390_390 Q9Y6K1 Q9Y6K1|F8WE91|Q9Y6K1-2|A0A0C4DG02 DNA (cytosine-5)-methyltransferase 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17381.17381.3 10.88 10.88 1.237 3 1 1 0 753.6844 2179.0742 S390s TMT10 383 (K) LFPVCHDsDESDTAK (A) LFPVCHDS(0.99)DES(0.0)DT(0.0)AK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DNMT3A 103454.1 1 3 2836.1 68.54 HUMAN 1 1.7514 -6.6016 LFQLGPPSPVKMPSP-p Q9NZH5;S165-p LFQLGPPSPVKMPSP 0.233628206047255 0.00143774220577793 -0.273333333333333 -0.911 12.1090332708278 45.8257323854644 -0.273333333333333 -0.911 0.0615313824858486 2.61472946824651e-05 -2.35168907559201 -13.089863856879 Q9NZH5 PTTG2 Q9NZH5.S165.p_PTTG2 Q9NZH5_S165s _1_1_165_165 Q9NZH5 O95997|Q9NZH5|Q9NZH5-2 Securin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27618.27826.2 15.79 15.79 99 1 1 1 0 860.993 1641.014 S165s TMT10 158 (K) LFQLGPPsPVK (M) LFQLGPPS(1.0)PVK K:TMT10,s:Phosphorylated S PTTG2 22415.4 7 1 5861.1 15.79 HUMAN 1 -12.109 -45.8257 LFQSTPCSQ______-p F5GX19;S141-p LFQSTPCSQ______ 0.689514561211174 0.478545197932322 -0.169666666666667 0.447666666666667 3.0262170801148 4.26932183341051 -0.169666666666667 0.447666666666667 0.49817082749291 0.374169011559053 -0.725732270415912 0.968101017233556 F5GX19 NotFound F5GX19.S141.p_NotFound F5GX19_S141s _1_1_141_141 F5GX19 F5GX19 Ragulator complex protein LAMTOR1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.35559.35559.5 12.34 12.34 2 8 1 1 0 977.1265 4801.5639 S141s TMT10 104 (K) KLPPLPSLTSQPHQVLASEPIPFSDLQQVQLFQSTPCsQ (-) KLPPLPS(0.0)LT(0.0)S(0.0)QPHQVLAS(0.0)EPIPFS(0.0)DLQQVQLFQS(0.0)T(0.0)PCS(0.99)Q K:TMT10,C:Carbamidomethylation,s:Phosphorylated S LAMTOR1 15858.3 1 1 1333.2 152.96 HUMAN 1 -3.0262 4.2693 LFRAAVPSGASTGIY-p P06733;S37-p LFRAAVPSGASTGIY 0.375438987117976 0.0689732550722136 0.124 0.224666666666667 7.86968050022264 15.44188248935 0.124 0.224666666666667 0.163317209193214 0.0285635216290148 1.6125452529704 2.95974322874509 P06733 ENO1 P06733.S37.p_ENO1 P06733_S37s _1_1_37_37 P06733 P06733 Alpha-enolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24471.24471.3 12.65 5.09 2.218 4 1 1 0 939.1516 2735.4616 S37s TMT10 33 (R) AAVPsGASTGIYEALELRDNDK (T) AAVPS(0.99)GAS(0.0)T(0.0)GIY(0.0)EALELRDNDK K:TMT10,s:Phosphorylated S ENO1 47510.4 4 2 623.1 259.34 HUMAN 1 7.8697 15.4419 LFREMEKSFDEQNVP-p O95425-2;S313-p LFREMEKSFDEQNVP 0.274203367926357 0.0511022465675881 -0.194 -0.341 10.6372594880194 17.2471801309881 -0.194 -0.341 0.0863523281696181 0.0188487253779816 -2.09267506607726 -3.30891137835971 O95425 SVIL O95425.2.S313.p_SVIL O95425-2_S313s _1_1_313_313 O95425-2 O95425|O95425-3|O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13767.13767.2 15.32 9.74 99 1 1 1 0 801.4017 1521.8313 S313s TMT10 313 (K) sFDEQNVPK (R) S(1.0)FDEQNVPK K:TMT10,s:Phosphorylated S SVIL 202384.1 8 10 406.2 324.74 HUMAN 1 -10.6373 -17.2472 LFRLVELSGGCIKID-p O15440;S1247-p LFRLVELSGGCIKID 0.301887758255495 0.149400739629251 -0.207666666666667 0.226666666666667 9.75200969826549 10.8663232601085 -0.207666666666667 0.226666666666667 0.105876366877727 0.0819157994346573 -1.93865647930307 2.13175875264678 O15440 ABCC5 O15440.S1247.p_ABCC5 O15440_S1247s _1_1_1247_1247 O15440 O15440|O15440-5 Multidrug resistance-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22649.22649.2 8.49 5.55 99 1 1 1 0 807.4431 1533.9075 S1247s TMT10 1243 (R) LVELsGGCIK (I) LVELS(1.0)GGCIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ABCC5 161741.5 1 8 1666.1 122.51 HUMAN 1 -9.752 10.8663 LFRSRLDSYVRSLPF-p Q9Y5R8;S132-p LFRSRLDSYVRSLPF 0.235621777934373 0.0044825839263387 -0.247666666666667 -0.576666666666667 12.0243823130483 34.459511803649 -0.247666666666667 -0.576666666666667 0.0627424926827997 0.000358136693474181 -2.33666006013847 -7.89734583391632 Q9Y5R8 TRAPPC1 Q9Y5R8.S132.p_TRAPPC1 Q9Y5R8_S132s _1_1_132_132 Q9Y5R8 Q9Y5R8 Trafficking protein particle complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9306.9306.2 8.73 3.36 7.279 3 1 1 0 652.8316 1224.6898 S132s TMT10 128 (R) SRLDsYVR (S) S(0.0)RLDS(0.99)Y(0.0)VR s:Phosphorylated S TRAPPC1 16945.4 3 1 6910.1 8.73 HUMAN 1 -12.0244 -34.4595 LFRVGHMSSVELDDE-p P51798;S60-p LFRVGHMSSVELDDE 0.675922624629322 0.20268461476253 0.0746666666666667 0.141333333333333 3.18898384530871 9.11978208337904 0.0746666666666667 0.141333333333333 0.479845708969119 0.122467764856514 0.758542486434585 1.828432507451 P51798 CLCN7 P51798.S60.p_CLCN7 P51798_S60sS61s_2_2_60_61 P51798 P51798 H(+)/Cl(-) exchange transporter 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29368.29368.4 17.33 17.33 99 2 2 2 0 884.6558 3375.6641 S60s S61s TMT10 56 (R) VGHMssVELDDELLDPDMDPPHPFPK (E) VGHMS(1.0)S(1.0)VELDDELLDPDMDPPHPFPK K:TMT10,s:Phosphorylated S CLCN7 89191 1 6 2487.1 81.4 HUMAN 1 3.189 9.1198 LFRYKHPSEEELRAL-p Q9NX61;S44-p LFRYKHPSEEELRAL 0.593702896352795 0.182057662973669 0.0993333333333333 -0.162666666666667 4.1753396511384 9.73159626114977 0.0993333333333333 -0.162666666666667 0.382354349486194 0.106375196144256 0.950501025494161 -1.93435628771519 Q9NX61 TMEM161A Q9NX61.S44.p_TMEM161A Q9NX61_S44s _1_1_44_44 Q9NX61 Q9NX61|K7EPA3|Q9NX61-2|U3KQT6 Transmembrane protein 161A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6703.6703.3 9.44 6.77 8.079 2 1 1 0 609.3151 1745.9587 S44s TMT10 40 (R) YKHPsEEELR (A) Y(0.0)KHPS(0.99)EEELR K:TMT10,s:Phosphorylated S TMEM161A 54171.6 1 1 6797.1 9.44 HUMAN 1 4.1753 -9.7316 LFSDEEDSEDLFSSQ-p Q641Q2;S544-p LFSDEEDSEDLFSSQ 0.935159435110499 0.172081174191461 -0.013 0.140666666666667 0.570466929687659 10.0474576695154 -0.013 0.140666666666667 0.876906535877792 0.0989131956357927 -0.162368767671367 1.98914800508872 Q641Q2 FAM21A Q641Q2.S544.p_FAM21A Q641Q2_S544s _1_1_544_544 Q641Q2 Q641Q2|Q641Q2-2|E7ESD2|F8W7U3|A0A087WYF6 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25358.25358.3 18.75 18.75 4.011 6 1 1 0 906.0807 2636.2616 S544s TMT10 536 (K) GLFSDEEDsEDLFSSQSASK (L) GLFS(0.0)DEEDS(0.99)EDLFS(0.0)S(0.0)QS(0.0)AS(0.0)K K:TMT10,s:Phosphorylated S WASHC2A 147352.2 1 34 12.1 1178.3 HUMAN 1 -0.5705 10.0475 LFSDGDSSESEDTLS-p Q8IV63;S83-p LFSDGDSSESEDTLS 0.805930071607606 0.171345970800116 0.0373333333333333 0.146666666666667 1.80645143568372 10.0726604249294 0.0373333333333333 0.146666666666667 0.659712717852838 0.0983408499440009 0.465499506290497 1.99352416740347 Q8IV63 VRK3 Q8IV63.S83.p_VRK3 Q8IV63_S82sS83s_2_2_82_83 Q8IV63 Q8IV63|Q8IV63-2|M0QYA8|M0QYG0 Inactive serine/threonine-protein kinase VRK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28143.28625.3 15.96 15.96 1.363 9 2 2 0 879.6999 2477.1365 S82s S83s TMT10 74 (R) LSLFSDGDssESEDTLSSSER (S) LS(0.0)LFS(0.0)DGDS(0.99)S(0.99)ES(0.0)EDT(0.0)LS(0.0)S(0.0)S(0.0)ER s:Phosphorylated S VRK3 53622 1 9 387.2 332.82 HUMAN 1 1.8065 10.0727 LFSSKLSTPDVVSPF-p Q9BTX1;T440-p LFSSKLSTPDVVSPF 0.96293871466808 0.0258674815524451 0.0136666666666667 -0.312333333333333 0.316284107896793 21.5848917243895 0.0136666666666666 -0.312333333333333 0.929761565211307 0.00694241909907689 0.0923250515295261 -4.22328693181903 Q9BTX1 NDC1 Q9BTX1.T440.p_NDC1 Q9BTX1_T440tS445s_2_2_440_445 Q9BTX1 Q9BTX1|Q9BTX1-2|Q9BTX1-5|Q9BTX1-6|Q9BTX1-4 Nucleoporin NDC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33799.33799.4 12.67 11.47 1.139 10 2 2 0 891.6891 3403.7972 T440t S445s TMT10 431 (K) TSLFSSKLStPDVVsPFGTPFGSSVMNR (M) T(0.0)S(0.0)LFS(0.0)S(0.0)KLS(0.0)T(0.99)PDVVS(0.99)PFGT(0.0)PFGS(0.0)S(0.0)VMNR K:TMT10,t:Phosphorylated T,s:Phosphorylated S NDC1 76988 2 15 1059.1 182.55 HUMAN 1 0.3163 -21.5849 LFTNAVESLDEEEKD-p Q6P0N0;S1116-p LFTNAVESLDEEEKD 0.146473317485752 0.159402616009271 -0.349666666666667 -0.316333333333333 16.9889282056612 10.4900164281421 -0.349666666666667 -0.316333333333333 0.0200035547598301 0.0893302104615609 -3.26045443573725 -2.06610465134891 Q6P0N0 MIS18BP1 Q6P0N0.S1116.p_MIS18BP1 Q6P0N0_S1116s _1_1_1116_1116 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25081.25081.3 13.87 13.87 7.48 2 1 1 0 721.3615 2082.1007 S1116s TMT10 1109 (K) LFTNAVEsLDEEEK (D) LFT(0.0)NAVES(0.99)LDEEEK K:TMT10,s:Phosphorylated S MIS18BP1 129996 3 36 54.1 728.39 HUMAN 1 -16.9889 -10.49 LFTRQRLSIQPLTQE-p Q9P016;S204-p LFTRQRLSIQPLTQE 0.932495418439431 0.0181330565646401 -0.013 0.365333333333333 0.598916268005264 23.9801974924412 -0.013 0.365333333333333 0.871180956035184 0.00399926562961041 -0.170005765668832 4.78438662990479 Q9P016 THYN1 Q9P016.S204.p_THYN1 Q9P016_S204s _1_1_204_204 Q9P016 Q9P016 Thymocyte nuclear protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36247.36247.4 27.6 27.6 4.37 4 1 1 0 875.953 3420.8303 S204s TMT10 201 (R) QRLsIQPLTQEEFDFVLSLEEKEPS (-) QRLS(0.99)IQPLT(0.0)QEEFDFVLS(0.0)LEEKEPS(0.0) K:TMT10,s:Phosphorylated S THYN1 25868 2 2 4150.1 36.59 HUMAN 1 -0.5989 23.9802 LFVGSGVSGGEEGAR-p P52209;S129-p LFVGSGVSGGEEGAR 0.668143294057803 0.0808264799465619 0.139333333333333 0.196333333333333 3.27575560980844 14.4881952770036 0.139333333333333 0.196333333333333 0.470353563865104 0.0355779132878932 0.775885849866472 2.78126207386017 P52209 PGD P52209.S129.p_PGD P52209_S129s _1_1_129_129 P52209 P52209|P52209-2|B99948 6-phosphogluconate dehydrogenase, decarboxylating HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23872.23872.3 19.65 19.65 2.292 2 1 1 0 634.3168 1820.9704 S129s TMT10 120 (K) GILFVGSGVsGGEEGAR (Y) GILFVGS(0.0)GVS(0.99)GGEEGAR s:Phosphorylated S PGD 53652.5 1 2 3230.1 56.54 HUMAN 1 3.2758 14.4882 LFVKNAMSLPQLNEK-p Q9H3Q1;S118-p LFVKNAMSLPQLNEK 0.249157518555538 0.120969767436361 0.256666666666667 -0.163 11.5170242625474 12.0941636658913 0.256666666666667 -0.163 0.0705176082273468 0.0617424179695449 2.2469491935641 -2.3478654670821 Q9H3Q1 CDC42EP4 Q9H3Q1.S118.p_CDC42EP4 Q9H3Q1_S118s _1_1_118_118 Q9H3Q1 Q9H3Q1 Cdc42 effector protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20914.20914.2 15.2 15.2 99 1 1 1 0 891.9658 1702.9562 S118s TMT10 115 (K) NAMsLPQLNEK (E) NAMS(1.0)LPQLNEK K:TMT10,s:Phosphorylated S CDC42EP4 38036.3 11 8 635.1 256.47 HUMAN 1 11.517 -12.0942 LFVPDANSPSSTLRL-p Q8NI08-2;S162-p LFVPDANSPSSTLRL 0.226611931653947 0.235773089826665 0.185 0.15 12.3868476306429 8.26255037938602 0.185 0.15 0.0577185266999753 0.149191802855485 2.40114456684715 1.68012699165911 Q8NI08 NCOA7 Q8NI08.2.S162.p_NCOA7 Q8NI08-2_S162s _1_1_162_162 Q8NI08-2 Q8NI08|Q8NI08-2|Q8NI08-7|Q8NI08-3|Q8NI08-4 Isoform 2 of Nuclear receptor coactivator 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.31520.31520.3 16.99 16.99 1.523 6 1 1 0 1002.533 2925.6036 S162s TMT10 144 (K) LFTHTIVPGQVLFVPDANsPSSTLR (L) LFT(0.0)HT(0.0)IVPGQVLFVPDANS(0.99)PS(0.0)S(0.0)T(0.0)LR s:Phosphorylated S NCOA7 105415.6 2 1 906.1 202.52 HUMAN 1 12.3868 8.2626 LFWEKKLSGLNAFDI-p O95983;S144-p LFWEKKLSGLNAFDI 0.913103740581483 0.00354006757293965 -0.0206666666666667 -0.606333333333333 0.769990927768394 36.5862155636536 -0.0206666666666667 -0.606333333333333 0.837531031692644 0.000219471657543768 -0.215144372424955 -8.69690795927932 O95983 MBD3 O95983.S144.p_MBD3 O95983_S144s _1_1_144_144 O95983 O95983|O95983-2|K7EIE8|A0A0A0MTS6 Methyl-CpG-binding domain protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35372.35372.4 20.82 19.23 99 1 1 1 0 629.3605 2434.4524 S144s TMT10 142 (K) KLsGLNAFDIAEELVK (T) KLS(1.0)GLNAFDIAEELVK K:TMT10,s:Phosphorylated S MBD3 33071.7 2 4 2405.1 84.93 HUMAN 1 -0.77 -36.5862 LGAAAHYTGDKASPD-p Q14677-3;T294-p LGAAAHYTGDKASPD 0.136348230417904 0.0558449180233011 -0.344666666666667 0.221 17.7528908493194 16.6925670010204 -0.344666666666667 0.221 0.0167768690639873 0.02141624368824 -3.41242674217446 3.19994267320687 Q14677 CLINT1 Q14677.3.T294.p_CLINT1 Q14677-3_T294t _1_1_294_294 Q14677-3 Q14677-3|Q14677-2 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16235.16235.4 18.46 18.46 5.551 3 1 1 0 493.5056 1891.0325 T294t TMT10 284 (K) TIDLGAAAHYtGDK (A) T(0.0)IDLGAAAHY(0.0)T(0.99)GDK K:TMT10,t:Phosphorylated T CLINT1 70350.7 3 18 632.1 256.73 HUMAN 1 -17.7529 16.6926 LGADSLTSLRRLAEA-p P20290;S161-p LGADSLTSLRRLAEA 0.702689989895341 0.13191790542463 0.081 0.211333333333333 2.88081890732531 11.5964798832 0.081 0.211333333333333 0.515131502031664 0.0692391952730212 0.696099544852255 2.2598757227286 P20290 BTF3 P20290.S161.p_BTF3 P20290_S161s _1_1_161_161 P20290 P20290 Transcription factor BTF3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37014.37014.4 16.27 13.3 1.115 5 1 1 0 717.1315 2785.5443 S161s TMT10 142 (K) QLTEMLPSILNQLGADSLTsLRR (L) Q(0.0)LT(0.0)EM(0.0)LPS(0.0)ILN(0.0)QLGADS(0.0)LT(0.0)S(0.99)LRR s:Phosphorylated S BTF3 22224.6 1 2 3063.1 61.68 HUMAN 1 2.8808 11.5965 LGAEERRSPVREGTA-p O15119;S456-p LGAEERRSPVREGTA 0.0773172356273999 0.116473287207976 0.407333333333333 0.211333333333333 23.8057932096581 12.3186758658685 0.407333333333333 0.211333333333333 0.00416313677188147 0.0586316901272493 4.74754150230175 2.38776089055355 O15119 TBX3 O15119.S456.p_TBX3 O15119_S456s _1_1_456_456 O15119 O15119|O15119-2|O15119-3 T-box transcription factor TBX3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4936.4936.4 9.44 6.71 7.464 2 1 1 0 598.5783 2311.3246 S456s TMT10 455 (R) RsPVREGTAPAKVEEAR (A) RS(0.99)PVREGT(0.0)APAKVEEAR K:TMT10,s:Phosphorylated S TBX3 79786.8 2 5 1589.1 129.37 HUMAN 1 23.8058 12.3187 LGCRQFVTPADVVSG-p P13797;T354-p LGCRQFVTPADVVSG 0.325038366971884 0.137834895278433 0.143 -0.197 9.14278983058883 11.3403085132153 0.143 -0.197 0.1218206793122 0.0734461691766224 1.83308340334789 -2.21480509190674 P13797 PLS3 P13797.T354.p_PLS3 P13797_T354t _1_1_354_354 P13797 P13797|Q14651 Plastin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20062.20062.3 14.92 12.84 5.185 2 1 1 0 666.3558 1917.0846 T354t TMT10 351 (R) QFVtPADVVSGNPK (L) QFVT(0.99)PADVVS(0.0)GNPK K:TMT10,t:Phosphorylated T PLS3 71323.2 1 4 3150.1 59.17 HUMAN 1 9.1428 -11.3403 LGDHRKVSPPLMAPP-p Q6PL24;S153-p LGDHRKVSPPLMAPP 0.693918884798584 0.314268193760884 -0.091 0.103666666666667 2.97760447407634 6.64322487644971 -0.091 0.103666666666667 0.503778411413153 0.216609506224469 -0.71585983325913 1.39803869655434 Q6PL24 TMED8 Q6PL24.S153.p_TMED8 Q6PL24_S153s _1_1_153_153 Q6PL24 Q6PL24 Protein TMED8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32094.32094.4 19.13 19.13 9.673 2 1 1 0 678.376 2630.517 S153s TMT10 151 (R) KVsPPLMAPPCIWTFAK (V) KVS(0.99)PPLMAPPCIWT(0.0)FAK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TMED8 35968.1 2 3 3525.1 49.05 HUMAN 1 -2.9776 6.6432 LGDLGGGSRDLSPEP-p Q8TBE0;S180-p LGDLGGGSRDLSPEP 0.0901040343669965 0.0604373441048485 0.336333333333333 0.229666666666667 22.2502327855306 16.2335559460851 0.336333333333333 0.229666666666667 0.00595630216387917 0.0238036965586702 4.37938691522034 3.11092682178575 Q8TBE0 BAHD1 Q8TBE0.S180.p_BAHD1 Q8TBE0_S180sS184s_2_2_180_184 Q8TBE0 Q8TBE0|Q8TBE0-2|Q8TBE0-3 Bromo adjacent homology domain-containing 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15330.15330.4 10.38 10.38 99 2 2 2 0 685.0698 2577.3219 S180s S184s TMT10 173 (R) LGDLGGGsRDLsPEPAPDEGPRR (D) LGDLGGGS(1.0)RDLS(1.0)PEPAPDEGPRR s:Phosphorylated S BAHD1 85848.7 2 10 636.1 256.1 HUMAN 1 22.2502 16.2336 LGDQRRPSLPALHFI-p P00519-2;S16-p LGDQRRPSLPALHFI 0.910143139572536 0.0924402057109601 -0.0196666666666667 0.323666666666667 0.801206640592091 13.6775950740941 -0.0196666666666667 0.323666666666667 0.831532706569576 0.0428785896853195 -0.223241897732235 2.63237754942556 P00519 ABL1 P00519.2.S16.p_ABL1 P00519-2_S16s _1_1_16_16 P00519-2 P00519-2 Isoform IB of Tyrosine-protein kinase ABL1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19912.19912.3 11.65 11.65 99 1 1 1 0 529.9717 1507.931 S16s Hydrogen 14 (R) RPsLPALHFIK (G) RPS(1.0)LPALHFIK K:TMT10-Lys-Only,s:Phosphorylated S ABL1 125637.1 2 1 347.1 352.28 HUMAN 1 -0.8012 13.6776 LGDSANLSILSGGTP-p P30307;S61-p LGDSANLSILSGGTP 0.519517124214582 0.698301605134956 0.117666666666667 -0.0486666666666666 5.25186473229478 2.14390647477466 0.117666666666667 -0.0486666666666666 0.298410105890626 0.610392730211603 1.15001979420446 -0.540376027477032 P30307 CDC25C P30307.S61.p_CDC25C P30307_S61sS64s_2_2_61_64 P30307 P30307|P30307-2 M-phase inducer phosphatase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.31786.31786.3 8.81 8.81 2.187 4 2 2 0 765.7205 2135.2112 S61s S64s TMT10 53 (K) FLGDSANLsILsGGTPK (R) FLGDS(0.0)ANLS(0.99)ILS(0.99)GGT(0.0)PK K:TMT10,s:Phosphorylated S CDC25C 54219.5 1 6 1847.1 111.23 HUMAN 1 5.2519 -2.1439 LGDSKNVSQESLETK-p Q5UIP0;S1873-p LGDSKNVSQESLETK 0.286866398353762 0.0984358220427899 -0.244666666666667 0.349 10.2335563279169 13.3098254866292 -0.244666666666667 0.349 0.0947642145251918 0.0466678132552941 -2.0223179834673 2.56560064506163 Q5UIP0 RIF1 Q5UIP0.S1873.p_RIF1 Q5UIP0_S1873s _1_1_1873_1873 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12508.12508.4 12.28 12.28 2.218 4 1 1 0 800.4276 3118.7289 S1873s TMT10 1871 (K) NVsQESLETKEEKPEETPK (M) NVS(0.99)QES(0.0)LET(0.0)KEEKPEET(0.0)PK K:TMT10,s:Phosphorylated S RIF1 276628.8 5 23 29.1 922.06 HUMAN 1 -10.2336 13.3098 LGDVFLDSGRKTRSA-p Q14980;S1800-p LGDVFLDSGRKTRSA 0.896057473902453 0.444953033894948 -0.028 -0.083 0.93357374482802 4.68312368773245 -0.0280000000000001 -0.083 0.806571041755071 0.340163437207133 -0.257132085855319 -1.04545509718528 Q14980 NUMA1 Q14980.S1800.p_NUMA1 Q14980_S1800s _1_1_1800_1800 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30725.30725.3 16.18 16.18 1.202 5 1 1 0 953.8219 2779.4878 S1800s TMT10 1782 (R) SQAPLESSLDSLGDVFLDsGRK (T) S(0.0)QAPLES(0.0)S(0.0)LDS(0.0)LGDVFLDS(0.99)GRK K:TMT10,s:Phosphorylated S NUMA1 239339.3 2 21 31.1 900.97 HUMAN 1 -0.9336 -4.6831 LGEAPPGTPPCRLCC-p Q96B54;T108-p LGEAPPGTPPCRLCC 0.988436249417552 0.268860681033287 -0.00266666666666668 -0.107333333333333 0.104080190288005 7.51288751444289 -0.00266666666666667 -0.107333333333333 0.976319539167811 0.177301025912583 -0.0310804681001751 -1.55006571188811 Q96B54 ZNF428 Q96B54.T108.p_ZNF428 Q96B54_T108t _1_1_108_108 Q96B54 Q96B54 Zinc finger protein 428 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12174.12596.3 14.2 14.2 7.749 2 1 1 0 582.2809 1664.8628 T108t TMT10 99 (R) SPLGEAPPGtPPCR (L) S(0.0)PLGEAPPGT(0.99)PPCR C:Carbamidomethylation,t:Phosphorylated T ZNF428 20879.6 4 2 4492.1 30.76 HUMAN 1 -0.1041 -7.5129 LGEEKKST_______-p Q00765;T189-p LGEEKKST_______ 0.76632795784538 0.0314332150549503 -0.0483333333333333 -0.295333333333333 2.21686722103031 20.2980134145165 -0.0483333333333333 -0.295333333333333 0.60022389104438 0.00933681295295401 -0.556310669156453 -3.93944453939196 Q00765 REEP5 Q00765.T189.p_REEP5 Q00765_T189t _1_1_189_189 Q00765 Q00765 Receptor expression-enhancing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17691.17691.3 13.26 13.26 1.196 3 1 1 0 719.7469 2077.2472 T189t TMT10 177 (K) ATVNLLGEEKKSt (-) AT(0.0)VNLLGEEKKS(0.0)T(0.99) K:TMT10,t:Phosphorylated T REEP5 21720.9 4 1 4953.1 24.74 HUMAN 1 -2.2169 -20.298 LGEGSDDSDSEKRRP-p Q9Y5B0;S872-p LGEGSDDSDSEKRRP 0.401215616195323 0.00550441818666763 -0.227333333333333 0.580666666666667 7.32167366470952 32.7632507934666 -0.227333333333333 0.580666666666667 0.185281745528283 0.000529267127041655 -1.51721127228049 7.30593369257138 Q9Y5B0 CTDP1 Q9Y5B0.S872.p_CTDP1 Q9Y5B0_S869sS872s_2_2_869_872 Q9Y5B0 Q9Y5B0|A0A0A0MR03 RNA polymerase II subunit A C-terminal domain phosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31119.31735.4 16.68 11.64 2.209 4 2 2 0 901.8971 3444.6303 S869s S872s TMT10 852 (K) EDLESMDKEVDDILGEGsDDsDSEK (R) EDLES(0.0)MDKEVDDILGEGS(0.99)DDS(0.99)DS(0.0)EK K:TMT10,s:Phosphorylated S CTDP1 105367.3 6 7 1257.1 161.48 HUMAN 1 -7.3217 32.7633 LGEISALTSKLADLR-p P18206-2;T442-p LGEISALTSKLADLR 0.0472934975937335 0.413763376101025 -0.758666666666667 0.210333333333333 29.4406064342336 5.0985626871647 -0.758666666666667 0.210333333333333 0.00113746844245914 0.309131834589561 -6.26371591925781 1.12185938192984 P18206 VCL P18206.2.T442.p_VCL P18206-2_T442t _1_1_442_442 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20904.20904.3 12.85 10.61 1.412 4 1 1 0 548.6392 1563.9358 T442t TMT10 434 (R) SLGEISALtSK (L) S(0.0)LGEIS(0.0)ALT(0.99)S(0.0)K K:TMT10,t:Phosphorylated T VCL 117290.9 1 8 319.1 365.38 HUMAN 1 -29.4406 5.0986 LGESEGLSDDEETIS-p P16157-23;S55-p LGESEGLSDDEETIS 0.60035042962897 0.0317142564727657 -0.131 0.352333333333333 4.09288331487632 20.239620077442 -0.131 0.352333333333333 0.389683187074829 0.00946319942193724 -0.934843197264146 3.92683434218338 P16157 ANK1 P16157.23.S55.p_ANK1 P16157-23_S55s _1_1_55_55 P16157-23 P16157-23|P16157-17|P16157-18 Isoform 23 of Ankyrin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16100.16100.3 19.06 19.06 4.635 5 1 1 0 759.3412 2196.0353 S55s TMT10 47 (K) ELGESEGLsDDEETISTR (V) ELGES(0.0)EGLS(0.99)DDEET(0.0)IS(0.0)T(0.0)R s:Phosphorylated S ANK1 17967.9 1 1 5466.1 19.06 HUMAN 1 -4.0929 20.2396 LGFRPEYSASQLKGF-p P09874;S177-p LGFRPEYSASQLKGF 0.930978723493408 0.356660836525041 -0.0136666666666667 0.0983333333333334 0.615897227625251 5.93937682257395 -0.0136666666666667 0.0983333333333334 0.867781280109922 0.254719572833086 -0.174545885759054 1.27345644762623 P09874 PARP1 P09874.S177.p_PARP1 P09874_S177s _1_1_177_177 P09874 P09874 Poly [ADP-ribose] polymerase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15306.15306.4 9.04 4.88 1.197 3 1 1 0 641.3344 2482.3454 S177s TMT10 166 (K) NREELGFRPEYsASQLK (G) NREELGFRPEY(0.0)S(0.99)AS(0.0)QLK K:TMT10,s:Phosphorylated S PARP1 113880.5 2 1 1179.1 169.18 HUMAN 1 -0.6159 5.9394 LGFSSDESDVEASPR-p Q9Y2U8;S144-p LGFSSDESDVEASPR 0.940726562469484 0.649255491905347 -0.0133333333333333 -0.047 0.521241036762136 2.55909962505218 -0.0133333333333333 -0.047 0.886902535197699 0.55474070932243 -0.149062117265696 -0.629262821318505 Q9Y2U8 LEMD3 Q9Y2U8.S144.p_LEMD3 Q9Y2U8_S144s _1_1_144_144 Q9Y2U8 Q9Y2U8 Inner nuclear membrane protein Man1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25091.25728.3 18.56 18.56 1.158 4 1 1 0 706.338 2037.0338 S144s TMT10 135 (K) VLLGFSSDEsDVEASPR (D) VLLGFS(0.0)S(0.0)DES(0.99)DVEAS(0.0)PR s:Phosphorylated S LEMD3 100851.5 3 5 412.1 321.94 HUMAN 1 -0.5212 -2.5591 LGGGGLRSPGGGRDC-p A1L020;S462-p LGGGGLRSPGGGRDC 0.18878716220005 0.206883100725143 -0.223333333333333 -0.269 14.1795561599386 9.00163044299888 -0.223333333333333 -0.269 0.038198330675655 0.125845287047501 -2.72594525076267 -1.80799458967933 A1L020 MEX3A A1L020.S462.p_MEX3A A1L020_S462s _1_1_462_462 A1L020 A1L020 RNA-binding protein MEX3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7141.7141.3 12.84 7.89 99 1 1 1 0 483.9229 1369.7862 S462s TMT10 455 (K) LGGGGLRsPGGGR (D) LGGGGLRS(1.0)PGGGR s:Phosphorylated S MEX3A 55085.2 1 5 2523.1 80 HUMAN 1 -14.1796 -9.0016 LGGGQMYSPREMRAN-p P40425;S395-p LGGGQMYSPREMRAN 0.414417417022212 0.892528691930729 0.111333333333333 -0.0136666666666667 7.0599015280822 0.693436769012323 0.111333333333333 -0.0136666666666667 0.196793091006053 0.852425284290642 1.47149463855626 -0.195089224103647 P40425 PBX2 P40425.S395.p_PBX2 P40425_S395s _1_1_395_395 P40425 P40425 Pre-B-cell leukemia transcription factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12421.12421.3 23.83 23.83 4.957 4 1 1 0 816.3547 2367.0808 S395s TMT10 377 (R) HSMGPGGYGDNLGGGQMYsPR (E) HS(0.0)MGPGGY(0.0)GDNLGGGQMY(0.0)S(0.99)PR s:Phosphorylated S PBX2 46165.8 1 6 2165.1 94.72 HUMAN 1 7.0599 -0.6934 LGGLRPESPESLTSV-p Q9H6F5;S18-p LGGLRPESPESLTSV 0.339649086360995 0.202344907199744 0.131333333333333 0.128333333333333 8.72584788605941 9.12916149552181 0.131333333333333 0.128333333333333 0.134095811059967 0.122203557920958 1.76090679165267 1.83005509531261 Q9H6F5 CCDC86 Q9H6F5.S18.p_CCDC86 Q9H6F5_S18s _1_1_18_18 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13583.13789.3 16.61 16.61 3.243 5 1 1 0 622.3103 1784.9501 S18s Hydrogen 11 (R) LGGLRPEsPESLTSVSR (T) LGGLRPES(0.99)PES(0.0)LT(0.0)S(0.0)VS(0.0)R s:Phosphorylated S CCDC86 40349 15 2 346.1 352.36 HUMAN 1 8.7258 9.1292 LGGRRLKSPQAPDPE-p Q9HB96;S180-p LGGRRLKSPQAPDPE 0.96003211231951 0.0159390366747267 0.00833333333333333 -0.398 0.342481250728856 24.8375617368954 0.00833333333333333 -0.398 0.924170017858094 0.00328279547643359 0.0997026913904038 -4.99656986053919 Q9HB96 FANCE Q9HB96.S180.p_FANCE Q9HB96_S180s _1_1_180_180 Q9HB96 Q9HB96 Fanconi anemia group E protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10425.10425.4 18.99 16.91 10.873 2 1 1 0 812.4094 3166.6583 S180s TMT10 178 (R) LKsPQAPDPEEEENRDSQQPGK (R) LKS(0.99)PQAPDPEEEENRDS(0.0)QQPGK K:TMT10,s:Phosphorylated S FANCE 59451.6 2 1 2163.1 94.82 HUMAN 1 0.3425 -24.8376 LGGTKYISFEERQWH-p A0A0A0MSG2;S354-p LGGTKYISFEERQWH 0.906964673578303 0.532962534188848 -0.029 -0.0733333333333333 0.832058242767421 3.67519367323652 -0.0289999999999999 -0.0733333333333333 0.825646559889571 0.429023056567369 -0.231204723439823 -0.854373752732579 A0A0A0MSG2 NotFound A0A0A0MSG2.S354.p_NotFound A0A0A0MSG2_S354s _1_1_354_354 A0A0A0MSG2 A0A0A0MSG2 Four and a half LIM domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19333.19333.4 9.29 9.29 9.29 2 1 1 0 718.5762 2791.3121 S354s TMT10 352 (K) YIsFEERQWHNDCFNCK (K) Y(0.0)IS(0.99)FEERQWHNDCFNCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FHL2 47062.8 2 2 4133.1 36.96 HUMAN 1 -0.8321 -3.6752 LGGVTQESFDLMIKE-p O75496;S85-p LGGVTQESFDLMIKE 0.118673427068097 0.000952253650599092 0.389333333333333 -1.426 19.2560276770233 54.079135208764 0.389333333333333 -1.426 0.0118685382095555 3.90918729946291e-06 3.72107370648919 -18.7120579566956 O75496 GMNN O75496.S85.p_GMNN O75496_S85s _1_1_85_85 O75496 O75496 Geminin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29034.29034.3 15.66 15.66 5.541 2 1 1 0 730.713 2110.1618 S85s TMT10 77 (K) NLGGVTQEsFDLMIK (E) NLGGVT(0.0)QES(0.99)FDLMIK K:TMT10,s:Phosphorylated S GMNN 23678.8 1 1 5878.1 15.66 HUMAN 1 19.256 -54.0791 LGHKRTGSNISGASS-p P22059;S379-p LGHKRTGSNISGASS 0.849932017970877 0.00847620007923522 -0.0276666666666667 -0.491 1.36674991530688 29.4118598231968 -0.0276666666666667 -0.491 0.730003611140849 0.00114502249187222 -0.363502016026426 -6.24551246334539 P22059 OSBP P22059.S379.p_OSBP P22059_S379s _1_1_379_379 P22059 P22059 Oxysterol-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18530.18530.2 14.77 14.77 1.319 7 1 1 0 1255.6017 2430.24 S379s TMT10 377 (R) TGsNISGASSDISLDEQYK (H) T(0.0)GS(0.99)NIS(0.0)GAS(0.0)S(0.0)DIS(0.0)LDEQY(0.0)K K:TMT10,s:Phosphorylated S OSBP 90274.8 9 9 468.1 302.79 HUMAN 1 -1.3667 -29.4119 LGHRRTNSTGGSSGS-p X6RLX0;S37-p LGHRRTNSTGGSSGS 0.164162708749184 0.0104679227872567 0.225666666666667 -0.463666666666667 15.7310956127263 27.7795118461484 0.225666666666667 -0.463666666666667 0.026723321632862 0.00166743462430148 3.01672643234253 -5.77569512136024 X6RLX0 ERC1 X6RLX0.S37.p_ERC1 X6RLX0_S37s _1_1_37_37 X6RLX0 X6RLX0|Q8IUD2|Q8IUD2-3|G8JLD3|Q8IUD2-2|X6RM00|Q8IUD2-4|Q8IUD2-5 ELKS/Rab6-interacting/CAST family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5107.5107.2 17.97 17.97 1.13 8 1 1 0 1011.4807 1941.9878 S37s TMT10 35 (R) TNsTGGSSGSSVGGGSGK (T) T(0.0)NS(0.99)T(0.0)GGS(0.0)S(0.0)GS(0.0)S(0.0)VGGGS(0.0)GK K:TMT10,s:Phosphorylated S ERC1 128700.8 6 4 904.1 203.11 HUMAN 1 15.7311 -27.7795 LGIDNEDSEHENDDD-p O95071;S1990-p LGIDNEDSEHENDDD 0.651183474642633 0.0956651557983632 0.062 0.186 3.49374629240657 13.4782684708976 0.062 0.186 0.447327266174031 0.0448924340081711 0.819031163334164 2.59612857603508 O95071 UBR5 O95071.S1990.p_UBR5 O95071_S1990s_1_1_1990_1990 O95071 O95071|O95071-2|E7EMW7 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24692.24692.5 22.44 22.44 1.179 6 1 1 0 1148.717 5658.5905 S1990s N1999n TMT10 1979 (R) ELLELGIDNEDsEHENDDDTnQSATLNDKDDDSLPAETGQNHPFFR (R) ELLELGIDN(0.0)EDS(0.99)EHEN(0.0)DDDT(0.0)N(0.99)QS(0.0)AT(0.0)LN(0.0)DKDDDS(0.0)LPAET(0.0)GQN(0.0)HPFFR K:TMT10,s:Phosphorylated S,n:Deamidated UBR5 312542 5 21 80.1 636.57 HUMAN 1 3.4937 13.4783 LGIKANDTQEFNLSA-p P51452;T93-p LGIKANDTQEFNLSA 0.602377813619717 0.966905507075249 -0.0803333333333334 -0.0043333333333333 4.0648333099014 0.206766224461299 -0.0803333333333334 -0.00433333333333329 0.392208199705781 0.953505884375342 -0.929502426773722 -0.0610509377775901 P51452 DUSP3 P51452.T93.p_DUSP3 P51452_T93t _1_1_93_93 P51452 P51452|P51452-2 Dual specificity protein phosphatase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27372.27372.3 13.82 13.82 6.283 3 1 1 0 705.3202 2033.9766 T93t TMT10 90 (K) ANDtQEFNLSAYFER (A) ANDT(0.99)QEFNLS(0.0)AY(0.0)FER t:Phosphorylated T DUSP3 20706.1 1 2 4696.1 27.83 HUMAN 1 -4.0648 -0.2068 LGINEDHSEGDEKSE-p Q69YQ0;S220-p LGINEDHSEGDEKSE 0.105961047054891 0.111578589634927 -0.440333333333333 0.242666666666667 20.5223160359671 12.5727953457461 -0.440333333333333 0.242666666666667 0.00886683029408232 0.0552994058829891 -3.99195251112128 2.43308148427379 Q69YQ0 SPECC1L Q69YQ0.S220.p_SPECC1L Q69YQ0_S220s _1_1_220_220 Q69YQ0 Q69YQ0|Q69YQ0-2|F8WAN1 Cytospin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10694.10694.3 20.72 20.72 99 1 1 1 0 727.348 2100.0609 S220s TMT10 211 (R) AQLGINEDHsEGDEK (S) AQLGINEDHS(1.0)EGDEK K:TMT10,s:Phosphorylated S SPECC1L 124999.2 3 2 1013.1 188.73 HUMAN 1 -20.5223 12.5728 LGIRISESPEPGQRT-p O14867;S445-p LGIRISESPEPGQRT 0.0901040343669965 0.0224644789927254 0.335 0.307 22.2568718370362 22.5182866383593 0.335 0.307 0.0059472037322107 0.00559978478446368 4.38091780761989 4.4366305168881 O14867 BACH1 O14867.S445.p_BACH1 O14867_S445s _1_1_445_445 O14867 O14867 Transcription regulator protein BACH1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7527.7527.3 8.79 8.79 8.785 2 1 1 0 470.2272 1328.7008 S445s TMT10 442 (R) ISEsPEPGQR (T) IS(0.0)ES(0.99)PEPGQR s:Phosphorylated S BACH1 83896.1 1 4 2229.1 92.57 HUMAN 1 22.2569 22.5183 LGIRSSKSAEDLTDG-p Q8N2F6-2;S45-p LGIRSSKSAEDLTDG 0.697222520756474 0.00266294368639259 -0.125 0.932666666666667 2.94161380749006 39.135863959883 -0.125 0.932666666666667 0.507970649195411 0.000122015106692673 -0.708528250191079 9.74939564645337 Q8N2F6 ARMC10 Q8N2F6.2.S45.p_ARMC10 Q8N2F6-2_S45s _1_1_45_45 Q8N2F6-2 Q8N2F6-2|Q8N2F6-5|Q8N2F6-4|Q8N2F6-6 Isoform 2 of Armadillo repeat-containing protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25226.25226.4 20.29 20.2 4.33 4 1 1 0 713.0948 2769.3831 S45s TMT10 45 (K) sAEDLTDGSYDDVLNAEQLQK (L) S(0.99)AEDLT(0.0)DGS(0.0)Y(0.0)DDVLNAEQLQK K:TMT10,s:Phosphorylated S ARMC10 34134.7 2 2 3044.1 62.25 HUMAN 1 -2.9416 39.1359 LGKAARFSCDIEQLK-p Q9NUQ6-3;S368-p LGKAARFSCDIEQLK 0.504515311273431 0.0123824029349833 -0.125666666666667 -0.389666666666667 5.487092066257 26.6159039778481 -0.125666666666667 -0.389666666666667 0.282677208151496 0.00217976463502349 -1.19261886615287 -5.45763266587662 Q9NUQ6 SPATS2L Q9NUQ6.3.S368.p_SPATS2L Q9NUQ6-3_S368s _1_1_368_368 Q9NUQ6-3 Q9NUQ6-3|Q9NUQ6-4|B8ZZZ7|Q9NUQ6-2 Isoform 3 of SPATS2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18669.18669.3 11.1 3.2 99 1 1 1 0 659.3412 1896.0413 S368s TMT10 364 (K) AARFsCDIEQLK (A) AARFS(1.0)CDIEQLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SPATS2L 65721.3 2 3 3039.1 62.45 HUMAN 1 -5.4871 -26.6159 LGKCDCCSDDQAPQH-p A0A0C4DFQ0;S275-p LGKCDCCSDDQAPQH 0.428639834168814 0.00234850053989814 -0.244333333333333 0.889333333333333 6.77552566544835 40.3959815682611 -0.244333333333333 0.889333333333333 0.210110343831678 9.12855093538999e-05 -1.42166007989563 10.3109141337491 A0A0C4DFQ0 PDE4DIP A0A0C4DFQ0.S275.p_PDE4DIP A0A0C4DFQ0_S275s _1_1_275_275 A0A0C4DFQ0 Q5VU43-2|A0A0C4DFQ0|E9PL24 Myomegalin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5748.5748.5 17.81 17.81 99 1 1 1 0 657.493 3203.4694 S275s TMT10 267 (K) ELGKCDCCsDDQAPQHGCNHK (L) ELGKCDCCS(1.0)DDQAPQHGCNHK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PDE4DIP 129884.6 2 2 2845.1 68.16 HUMAN 1 -6.7755 40.396 LGKDFPASPPKGYFL-p Q16763;S73-p LGKDFPASPPKGYFL 0.593661477758493 0.0299932771246821 -0.0806666666666667 -0.335 4.17704589783233 20.6110253758044 -0.0806666666666667 -0.335 0.382204160447711 0.00868755290639591 -0.950824376907663 -4.00743042778774 Q16763 UBE2S Q16763.S73.p_UBE2S Q16763_S73s _1_1_73_73 Q16763 Q16763 Ubiquitin-conjugating enzyme E2 S HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24260.24260.3 7.12 7.12 7.119 3 1 1 0 779.0954 2255.3043 S73s TMT10 69 (K) DFPAsPPKGYFLTK (I) DFPAS(0.99)PPKGY(0.0)FLT(0.0)K K:TMT10,s:Phosphorylated S UBE2S 23959 1 1 4586.1 29.2 HUMAN 1 -4.177 -20.611 LGKLDIISPQLSSAS-p Q15643;S1313-p LGKLDIISPQLSSAS 0.375335157640682 0.985535932604879 0.174666666666667 -0.00233333333333334 7.87488194540756 0.093927948159508 0.174666666666667 -0.00233333333333334 0.163121725012517 0.978604492569496 1.6134482342907 -0.0280779333381282 Q15643 TRIP11 Q15643.S1313.p_TRIP11 Q15643_S1313s _1_1_1313_1313 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36289.36289.4 10.13 10.13 1.266 6 1 1 0 920.0055 3597.0337 S1313s TMT10 1303 (K) DLLLGKLDIIsPQLSSASLLTPQSAECLR (A) DLLLGKLDIIS(0.99)PQLS(0.0)S(0.0)AS(0.0)LLT(0.0)PQS(0.0)AECLR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TRIP11 228267 1 12 463.1 303.86 HUMAN 1 7.8749 -0.0939 LGKRPLDSPEAEELP-p Q5VWG9;S183-p LGKRPLDSPEAEELP 0.775461946756303 0.0247429756117273 -0.0616666666666667 0.393666666666667 2.11560328072196 21.8553715113093 -0.0616666666666667 0.393666666666667 0.614383681421374 0.00652323236507106 -0.534253695967594 4.28444229089686 Q5VWG9 TAF3 Q5VWG9.S183.p_TAF3 Q5VWG9_S183s _1_1_183_183 Q5VWG9 Q5VWG9 Transcription initiation factor TFIID subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17436.17436.3 19.19 19.19 99 1 1 1 0 741.0502 2141.1677 S183s TMT10 179 (K) RPLDsPEAEELPAMK (R) RPLDS(1.0)PEAEELPAMK K:TMT10,s:Phosphorylated S TAF3 104321.6 6 1 699.1 240.69 HUMAN 1 -2.1156 21.8554 LGKRYKNSLETVGTP-p O43581-3;S52-p LGKRYKNSLETVGTP 0.810035198209422 0.77307148583332 0.035 -0.0316666666666666 1.7569183091512 1.5465761343752 0.035 -0.0316666666666666 0.667280093567874 0.700393950917282 0.454270593727838 -0.405826578411237 O43581 SYT7 O43581.3.S52.p_SYT7 O43581-3_S52s _1_1_52_52 O43581-3 O43581-3|O43581-4|O43581-5|O43581-2|O43581-6|F5GX00 Isoform 3 of Synaptotagmin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11363.11363.2 12.35 12.35 2.205 5 1 1 0 1081.5441 2082.1232 S52s TMT10 49 (R) YKNsLETVGTPDSGR (G) Y(0.0)KNS(0.99)LET(0.0)VGT(0.0)PDS(0.0)GR K:TMT10,s:Phosphorylated S SYT7 76194.9 2 1 1782.1 115.27 HUMAN 1 1.7569 -1.5466 LGKSKIGSPKVSGEA-p Q96G01;S818-p LGKSKIGSPKVSGEA 0.155202399069975 0.010818213994457 0.268333333333333 -0.654666666666667 16.2573302278469 27.5507032047633 0.268333333333333 -0.654666666666667 0.0236737456478691 0.00175763899597819 3.1177575951859 -5.712079670294 Q96G01 BICD1 Q96G01.S818.p_BICD1 Q96G01_S818s _1_1_818_818 Q96G01 Q96G01|Q96G01-3|Q96G01-4|A8MVZ6 Protein bicaudal D homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7683.7683.3 9.1 1.34 3.742 2 1 1 0 495.2997 1403.9189 S818s TMT10 814 (K) SKIGsPK (V) S(0.0)KIGS(0.99)PK K:TMT10,s:Phosphorylated S BICD1 111318.5 1 4 3561.1 48.23 HUMAN 1 16.2573 -27.5507 LGKTATDSDERIDDE-p A0A0C4DGZ1;S22-p LGKTATDSDERIDDE 0.979213683234262 0.467630623233655 0.00466666666666665 0.0803333333333333 0.180225861903755 4.40060781382886 0.00466666666666665 0.0803333333333334 0.959350737624227 0.363027243988539 0.0533717487531831 0.992791778670936 A0A0C4DGZ1 NotFound A0A0C4DGZ1.S22.p_NotFound A0A0C4DGZ1_S22s _1_1_22_22 A0A0C4DGZ1 A0A0C4DGZ1|Q8N5P1 Zinc finger CCCH domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20125.20125.4 21.55 21.88 1.175 5 1 1 0 834.63 3255.5276 S22s TMT10 18 (K) TATDsDERIDDEIDTEVEETQEEK (I) T(0.0)AT(0.0)DS(0.99)DERIDDEIDT(0.0)EVEET(0.0)QEEK K:TMT10,s:Phosphorylated S ZC3H8 34999.7 2 1 1997.1 103.4 HUMAN 1 0.1802 4.4006 LGKVVPLSLEKTKPS-p Q7Z2K8;S714-p LGKVVPLSLEKTKPS 0.335809348450105 0.013957787440184 -0.134 -0.425 8.8397842949875 25.7457977713648 -0.134 -0.425 0.130623576452712 0.00266330082039384 -1.78062917157273 -5.22839749191874 Q7Z2K8 GPRIN1 Q7Z2K8.S714.p_GPRIN1 Q7Z2K8_S714s _1_1_714_714 Q7Z2K8 Q7Z2K8|Q7Z2K8-2 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23897.23897.2 7.66 7.66 99 1 1 1 0 711.9233 1342.871 S714s TMT10 710 (K) VVPLsLEK (T) VVPLS(1.0)LEK K:TMT10,s:Phosphorylated S GPRIN1 103196.3 1 18 292.1 381.4 HUMAN 1 -8.8398 -25.7458 LGLAVPPSPPSAATA-p Q9H4Z2;S1007-p LGLAVPPSPPSAATA 0.820904102287946 0.363603660799039 0.0333333333333333 -0.091 1.64831947878331 5.82613980653527 0.0333333333333333 -0.091 0.684176341050036 0.261448418631063 0.429430255201641 -1.25323913104772 Q9H4Z2 ZNF335 Q9H4Z2.S1007.p_ZNF335 Q9H4Z2_S1007s _1_1_1007_1007 Q9H4Z2 Q9H4Z2|Q9H4Z2-2 Zinc finger protein 335 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23546.23959.3 18.67 18.67 4.676 4 1 1 0 748.7526 2164.2742 S1007s TMT10 999 (K) ALGLAVPPsPPSAATAASK (K) ALGLAVPPS(0.99)PPS(0.0)AAT(0.0)AAS(0.0)K K:TMT10,s:Phosphorylated S ZNF335 146887.1 7 3 2340.1 87.22 HUMAN 1 1.6483 -5.8261 LGLDHMASSIERMGQ-p P52272;S467-p LGLDHMASSIERMGQ 0.757581258769828 0.785311579197358 0.0426666666666667 0.0293333333333333 2.30891486425715 1.45566990261294 0.0426666666666667 0.0293333333333333 0.58763616198104 0.715209064012443 0.576176451894609 0.384531219908532 P52272 HNRNPM P52272.S467.p_HNRNPM P52272_S467s _1_1_467_467 P52272 P52272|A0A087X0X3|P52272-2 Heterogeneous nuclear ribonucleoprotein M HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23425.23425.3 16.06 16.06 1.112 2 1 1 0 641.6407 1842.9404 S467s TMT10 457 (R) MGPLGLDHMAsSIER (M) MGPLGLDHMAS(0.99)S(0.0)IER s:Phosphorylated S HNRNPM 77799.7 7 8 830.1 216.57 HUMAN 1 2.3089 1.4557 LGLELALSSDAESAA-p O94964-2;S141-p LGLELALSSDAESAA 0.116602871314905 0.0511160720134955 0.301666666666667 0.249666666666667 19.4172108785819 17.2440151563955 0.301666666666667 0.249666666666667 0.0114361254864027 0.0188624666254802 3.75497878600326 3.30828500854607 O94964 SOGA1 O94964.2.S141.p_SOGA1 O94964-2_S141sS142s_2_2_141_142 O94964-2 O94964-2 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35833.36245.4 21.61 21.61 2.771 3 2 2 0 636.5641 2383.303 S141s S142s TMT10 133 (R) LLGLELALssDAESAAGGPAGVR (T) LLGLELALS(0.99)S(0.99)DAES(0.0)AAGGPAGVR s:Phosphorylated S SOGA1 185623.3 3 25 215.1 433.51 HUMAN 1 19.4172 17.244 LGLGRAPSPAPRPVP-p Q5TZA2;S1451-p LGLGRAPSPAPRPVP 0.365544064173222 0.0323191453380679 0.126666666666667 0.298666666666667 8.11127487043782 20.1129738819676 0.126666666666667 0.298666666666667 0.154480089703031 0.00974322230758517 1.65445848495675 3.89956251225737 Q5TZA2 CROCC Q5TZA2.S1451.p_CROCC Q5TZA2_S1451s _1_1_1451_1451 Q5TZA2 Q5TZA2|Q5TZA2-2 Rootletin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7373.7373.3 10.01 7.59 3.591 2 1 1 0 589.3165 1685.9649 S1451s TMT10 1449 (R) APsPAPRPVPGSPAR (D) APS(0.99)PAPRPVPGS(0.0)PAR s:Phosphorylated S CROCC 228918.7 4 6 912.1 201.7 HUMAN 1 8.1113 20.113 LGLGRFFSSKTTAAH-p Q8TDX7;S187-p LGLGRFFSSKTTAAH 0.0961982570551692 0.981252753799922 -0.361333333333333 0.0106666666666667 21.5707346359181 0.117760958609973 -0.361333333333333 0.0106666666666668 0.00696508685402773 0.973248861014338 -4.22445149716337 0.0351093594017713 Q8TDX7 NEK7 Q8TDX7.S187.p_NEK7 Q8TDX7_S187s _1_1_187_187 Q8TDX7 Q8TDX7 Serine/threonine-protein kinase Nek7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30063.30063.3 12.76 8.01 1.175 2 1 1 0 645.6879 1855.0842 S187s TMT10 177 (K) LGDLGLGRFFsSK (T) LGDLGLGRFFS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S NEK7 35006.8 2 1 3294.1 54.61 HUMAN 1 -21.5707 0.1178 LGLKKSSSLESLQTA-p Q8TEW8;S746-p LGLKKSSSLESLQTA 0.844332914046491 0.206494358985813 0.0326666666666667 0.140333333333333 1.42268188080483 9.01231165539787 0.0326666666666667 0.140333333333333 0.720662314119575 0.125536158406626 0.376783118458129 1.8098421236852 Q8TEW8 PARD3B Q8TEW8.S746.p_PARD3B Q8TEW8_S746sS749s_2_2_746_749 Q8TEW8 Q8TEW8|Q8TEW8-2|Q8TEW8-5 Partitioning defective 3 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21725.21725.3 9.72 9.72 1.717 5 2 2 0 775.0626 2163.2385 S746s S749s TMT10 743 (K) KSSsLEsLQTAVAEVR (K) KS(0.0)S(0.0)S(0.99)LES(0.99)LQT(0.0)AVAEVR K:TMT10,s:Phosphorylated S PARD3B 133176.7 2 48 65.4 692.2 HUMAN 1 1.4227 9.0123 LGLLKLASPELERLI-p P17535;S100-p LGLLKLASPELERLI 0.126572282263763 0.038701562180901 -0.305 -0.262 18.6324933754688 18.9642587432639 -0.305 -0.262 0.0137009494015425 0.0126932877584452 -3.59142014320581 -3.65691229527521 P17535 JUND P17535.S100.p_JUND P17535_S100s _1_1_100_100 P17535 P17535|P05412 Transcription factor jun-D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12972.12972.2 13.79 4.99 99 1 1 1 0 612.3158 1143.6571 S100s TMT10 98 (K) LAsPELER (L) LAS(1.0)PELER s:Phosphorylated S JUND 35287.4 3 5 1749.1 117.66 HUMAN 1 -18.6325 -18.9643 LGLLRESS_______-p Q86WR7;S435-p LGLLRESS_______ 0.885311858337516 0.0494264695615137 -0.0316666666666667 -0.334 1.04478868088678 17.4695744385254 -0.0316666666666667 -0.334 0.786178444107063 0.0179078132257913 -0.285075768438633 -3.35305782190618 Q86WR7 PROSER2 Q86WR7.S435.p_PROSER2 Q86WR7_S435s _1_1_435_435 Q86WR7 Q86WR7|Q86WR7-2|D3DRR9 Proline and serine-rich protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18790.18790.2 8.55 8.55 1.597 2 1 1 0 592.3177 1103.6622 S435s TMT10 428 (K) LGLLRESs (-) LGLLRES(0.0)S(0.99) s:Phosphorylated S PROSER2 46143.5 3 9 734.1 235.52 HUMAN 1 -1.0448 -17.4696 LGLNLVASGGTAKAL-p P31939;S34-p LGLNLVASGGTAKAL 0.211663401130527 0.821293071319083 0.211 -0.0246666666666666 13.0194423078195 1.19630321808595 0.211 -0.0246666666666666 0.0498948555011832 0.759223562911931 2.51457091338279 -0.322386535719115 P31939 ATIC P31939.S34.p_ATIC P31939_S34s _1_1_34_34 P31939 P31939|P31939-2|F8WEF0 Bifunctional purine biosynthesis protein PURH HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.29078.29078.3 19.61 19.61 3.545 3 1 1 0 713.4052 2058.2323 S34s TMT10 23 (R) NLTALGLNLVAsGGTAK (A) NLT(0.0)ALGLNLVAS(0.99)GGT(0.0)AK K:TMT10,s:Phosphorylated S ATIC 65128.2 2 1 1978.1 104.52 HUMAN 1 13.0194 -1.1963 LGLPAPFSEEDEDDV-p Q66K89;S50-p LGLPAPFSEEDEDDV 0.981612148640369 0.526739898826826 0.00366666666666666 0.123333333333333 0.159594710877196 3.74153570867181 0.00366666666666667 0.123333333333333 0.963918973568853 0.422519180843488 0.0473680836862007 0.867249802448723 Q66K89 E4F1 Q66K89.S50.p_E4F1 Q66K89_S50s _1_1_50_50 Q66K89 Q66K89|H3BUJ7|H3BSL4 Transcription factor E4F1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37211.37211.4 27.48 20.55 4.5 2 1 1 0 969.4615 3794.8711 S50s TMT10 24 (R) EAGEGAVAAVAAALAPSGFLGLPAPFsEEDEDDVHR (C) EAGEGAVAAVAAALAPS(0.0)GFLGLPAPFS(0.99)EEDEDDVHR s:Phosphorylated S E4F1 84864.2 4 1 2210.1 93.39 HUMAN 1 0.1596 3.7415 LGLPHLPSPKQRAKF-p Q9BUN5-3;S46-p LGLPHLPSPKQRAKF 0.753442644064781 0.0243847388506343 -0.0456666666666667 -0.415 2.34788181823943 21.9711263700456 -0.0456666666666667 -0.415 0.582387195855833 0.00635166176145992 -0.584535430058408 -4.31077896631861 Q9BUN5 CCDC28B Q9BUN5.3.S46.p_CCDC28B Q9BUN5-3_S46s _1_1_46_46 Q9BUN5-3 Q9BUN5-3|E9PM81|E9PM03 Isoform 2 of Coiled-coil domain-containing protein 28B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20863.20863.5 14.67 14.67 14.668 5 1 1 0 577.9291 2805.6503 S46s TMT10 26 (R) RVPVPTSHSGSLALGLPHLPsPK (Q) RVPVPT(0.0)S(0.0)HS(0.0)GS(0.0)LALGLPHLPS(0.99)PK K:TMT10,s:Phosphorylated S CCDC28B 27303.2 2 2 3790.1 43.02 HUMAN 1 -2.3479 -21.9711 LGLRKAHSGAQGLLA-p Q9Y2Z4;S33-p LGLRKAHSGAQGLLA 0.0416981743708974 0.0394715177540044 0.518333333333333 0.324 30.7948154394027 18.8299354986435 0.518333333333333 0.324 0.000832757314627763 0.0130920136709566 6.67764046838551 3.62907430198367 Q9Y2Z4 YARS2 Q9Y2Z4.S33.p_YARS2 Q9Y2Z4_S33s _1_1_33_33 Q9Y2Z4 Q9Y2Z4 Tyrosine--tRNA ligase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11907.11907.3 16.3 16.3 99 1 1 1 0 597.3293 1710.0063 S33s TMT10 31 (K) AHsGAQGLLAAQK (A) AHS(1.0)GAQGLLAAQK K:TMT10,s:Phosphorylated S YARS2 53426.2 1 1 5785.1 16.3 HUMAN 1 30.7948 18.8299 LGLRKTGSYGALAEI-p O14974;S445-p LGLRKTGSYGALAEI 0.577319111087351 0.103307055171265 0.09 0.179 4.38846698154017 13.0226005835325 0.09 0.179 0.364043517369246 0.0498585841616864 0.990694485900519 2.5137581558782 O14974 PPP1R12A O14974.S445.p_PPP1R12A O14974_S445s _1_1_445_445 O14974 O14974|O14974-2|O14974-3|O14974-4|O14974-5 Protein phosphatase 1 regulatory subunit 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20004.20004.2 16.67 16.67 2.108 5 1 1 0 1132.6284 2184.2843 S445s TMT10 442 (R) KTGsYGALAEITASK (E) KT(0.0)GS(0.99)Y(0.0)GALAEIT(0.0)AS(0.0)K K:TMT10,s:Phosphorylated S PPP1R12A 115678 14 4 286.1 385.3 HUMAN 1 4.3885 13.0226 LGMVLIISLNLPLAD-p Q9Y2K9;S866-p LGMVLIISLNLPLAD 0.663480609588847 0.211983976313256 -0.0583333333333333 0.221666666666667 3.33264808668323 8.86281463882498 -0.0583333333333333 0.221666666666667 0.464232125925286 0.12993272182225 -0.787203654782788 1.78398460983719 Q9Y2K9 STXBP5L Q9Y2K9.S866.p_STXBP5L Q9Y2K9_T857tS858sS866s_3_3_857_866 Q9Y2K9 Q9Y2K9|E9PFI2|C9JCY1|C9K0E4|C9JPK3 Syntaxin-binding protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5065.5065.5 9.12 3.59 6.871 6 3 3 0 814.9919 3831.0597 T857t S858s S866s Hydrogen 844 (R) KNDSTISPCLFVGtsLGMVLIIsLNLPLADEQR (F) KNDS(0.0)T(0.0)IS(0.0)PCLFVGT(0.99)S(0.99)LGMVLIIS(0.99)LNLPLADEQR K:TMT10-Lys-Only,C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S STXBP5L 133652.9 1 3 4722.1 27.46 HUMAN 1 -3.3326 8.8628 LGNARLDTPDINIVL-p P30414;T1155-p LGNARLDTPDINIVL 0.513829023087372 0.0585627645991636 -0.257 0.781 5.34216674153077 16.4137453605577 -0.257 0.781 0.292269385087455 0.0228362855006102 -1.16640868664952 3.14574795376014 P30414 NKTR P30414.T1155.p_NKTR P30414_T1155t _1_1_1155_1155 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28872.28872.3 13.58 9.69 99 1 1 1 0 593.6737 1699.0406 T1155t TMT10 1153 (R) LDtPDINIVLK (Q) LDT(1.0)PDINIVLK K:TMT10,t:Phosphorylated T NKTR 166700.6 1 25 202.1 449.45 HUMAN 1 -5.3422 16.4137 LGNKIDRTDAISEEK-p Q9NR31;T139-p LGNKIDRTDAISEEK 0.419598745385739 0.0385389764152398 -0.222333333333333 0.490666666666667 6.96241366955801 18.9950606415147 -0.222333333333333 0.490666666666667 0.201260539739535 0.0126035803910896 -1.45443230763019 3.66331125872296 Q9NR31 SAR1A Q9NR31.T139.p_SAR1A Q9NR31_T139t _1_1_139_139 Q9NR31 Q9NR31|Q9NR31-2 GTP-binding protein SAR1a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36344.36344.5 28.25 27.24 2.235 5 1 1 0 905.2928 4442.4671 T139t TMT10 113 (K) VELNALMTDETISNVPILILGNKIDRtDAISEEK (L) VELNALMT(0.0)DET(0.0)IS(0.0)NVPILILGNKIDRT(0.99)DAIS(0.0)EEK K:TMT10,t:Phosphorylated T SAR1A 22480.5 3 1 3914.1 40.83 HUMAN 1 -6.9624 18.9951 LGNSKTKSPPQPPRP-p Q15464;S18-p LGNSKTKSPPQPPRP 0.705319541148296 0.106538559924418 0.0623333333333333 -0.179 2.85096544020414 12.8470906925981 0.0623333333333333 -0.179 0.518684722071729 0.0519147695765536 0.689975655880907 -2.48220687268188 Q15464 SHB Q15464.S18.p_SHB Q15464_S18s _1_1_18_18 Q15464 Q15464|Q15464-2 SH2 domain-containing adapter protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7857.8108.4 10.17 9.12 1.391 3 1 1 0 520.0314 1997.1333 S18s TMT10 16 (K) TKsPPQPPRPDYR (E) T(0.0)KS(0.99)PPQPPRPDY(0.0)R K:TMT10,s:Phosphorylated S SHB 55783 3 1 1825.1 112.53 HUMAN 1 2.851 -12.8471 LGPALLLTPRDRASG-p Q7Z5J4;T1476-p LGPALLLTPRDRASG 0.0733303965853216 0.642039392619766 0.509333333333333 0.124 24.3668669847261 2.62247166821645 0.509333333333333 0.124 0.00365858628103365 0.546704732298183 4.8851902942757 0.642546643439982 Q7Z5J4 RAI1 Q7Z5J4.T1476.p_RAI1 Q7Z5J4_T1476t _1_1_1476_1476 Q7Z5J4 Q7Z5J4|Q7Z5J4-3 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22680.22680.3 15.81 13.09 11.535 2 1 1 0 592.6757 1696.0471 T1476t TMT10 1466 (K) RPYLGPALLLtPR (D) RPY(0.0)LGPALLLT(0.99)PR t:Phosphorylated T RAI1 206315.3 1 22 142.1 522.21 HUMAN 1 24.3669 2.6225 LGPGALVSPRFERCG-p Q9P227;S372-p LGPGALVSPRFERCG 0.527344543785721 0.338905411422826 0.137 -0.127333333333333 5.14090119703627 6.22564954832044 0.137 -0.127333333333333 0.306132811682531 0.238470710239175 1.12981739956675 -1.32433707727891 Q9P227 ARHGAP23 Q9P227.S372.p_ARHGAP23 Q9P227_S372s _1_1_372_372 Q9P227 Q9P227|Q9P227-2 Rho GTPase-activating protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17373.17373.3 14.23 14.23 10.186 2 1 1 0 545.2897 1553.8849 S372s TMT10 361 (R) SAEALGPGALVsPR (F) S(0.0)AEALGPGALVS(0.99)PR s:Phosphorylated S ARHGAP23 163444.2 1 34 148.2 512.52 HUMAN 1 5.1409 -6.2256 LGPGLGASWRSREAA-p Q96SL1;S26-p LGPGLGASWRSREAA 0.125813604638611 0.89460689912724 -0.395666666666667 0.0213333333333333 18.6927430544188 0.678668375951652 -0.395666666666667 0.0213333333333333 0.0135121884808695 0.855328931730377 -3.60384537031217 0.191194464323541 Q96SL1 DIRC2 Q96SL1.S26.p_DIRC2 Q96SL1_S26s _1_1_26_26 Q96SL1 Q96SL1|Q96SL1-2|Q05BS2 Disrupted in renal carcinoma protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26820.26820.4 19.43 19.43 18.661 3 1 1 0 722.8636 2808.463 S26s TMT10 5 (R) WSSEEERQPLLGPGLGPGLGAsWR (S) WS(0.0)S(0.0)EEERQPLLGPGLGPGLGAS(0.99)WR s:Phosphorylated S DIRC2 52771.3 1 1 5428.1 19.43 HUMAN 1 -18.6927 0.6787 LGPNTGLSGGMPGAL-p Q9NS69;S128-p LGPNTGLSGGMPGAL 0.395179917614244 0.504678950196487 -0.116333333333333 0.064 7.44306714574294 3.9798513901067 -0.116333333333333 0.064 0.18017448336289 0.39995843558166 -1.5383683167166 0.913122136892993 Q9NS69 TOMM22 Q9NS69.S128.p_TOMM22 Q9NS69_S128s _1_1_128_128 Q9NS69 Q9NS69 Mitochondrial import receptor subunit TOM22 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.36671.36671.3 18.66 18.66 2.149 3 1 1 0 976.2122 2846.6578 S128s TMT10 118 (R) QILLGPNTGLsGGMPGALPSLPGKI (-) Q(0.0)ILLGPN(0.0)T(0.0)GLS(0.99)GGM(0.0)PGALPS(0.0)LPGKI K:TMT10,s:Phosphorylated S TOMM22 15521.3 4 2 3000.1 63.57 HUMAN 1 -7.4431 3.9799 LGPPQGGSPRGSHHT-p Q8IY92;S1044-p LGPPQGGSPRGSHHT 0.430974594387657 0.00455061128120994 -0.140333333333333 -0.566 6.73212222155362 34.3243491826623 -0.140333333333333 -0.566 0.212220717173312 0.000369458005793944 -1.41403624119622 -7.8487658655751 Q8IY92 SLX4 Q8IY92.S1044.p_SLX4 Q8IY92_S1044s _1_1_1044_1044 Q8IY92 Q8IY92|Q8IY92-2 Structure-specific endonuclease subunit SLX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22708.22708.3 13.15 13.15 99 1 1 1 0 512.2716 1454.8317 S1044s TMT10 1035 (R) FLLGPPQGGsPR (G) FLLGPPQGGS(1.0)PR s:Phosphorylated S SLX4 201834.1 4 12 218.1 430.83 HUMAN 1 -6.7321 -34.3243 LGPRGQDSPLLQRPQ-p Q5TH69;S2061-p LGPRGQDSPLLQRPQ 0.439479050351082 0.441810834660231 0.165666666666667 -0.0823333333333333 6.5762221304028 4.72336870453018 0.165666666666667 -0.0823333333333334 0.219977259348917 0.337025785480962 1.38660955407831 -1.05290819387809 Q5TH69 ARFGEF3 Q5TH69.S2061.p_ARFGEF3 Q5TH69_S2061s _1_1_2061_2061 Q5TH69 Q5TH69 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14398.14398.3 14.12 10.97 99 1 1 1 0 882.0949 2564.3023 S2061s TMT10 2058 (R) GQDsPLLQRPQHLMDQGQMR (H) GQDS(1.0)PLLQRPQHLMDQGQMR s:Phosphorylated S ARFGEF3 244013.5 1 12 618.1 260.46 HUMAN 1 6.5762 -4.7234 LGPSGANSGGPVMPS-p Q9BWU1;S449-p LGPSGANSGGPVMPS 0.677421637236938 0.379987426327322 0.0983333333333333 -0.086 3.16706224873475 5.58549286820652 0.0983333333333333 -0.086 0.482273917754943 0.276344428610011 0.754144986862652 -1.21008379075131 Q9BWU1 CDK19 Q9BWU1.S449.p_CDK19 Q9BWU1_S449s _1_1_449_449 Q9BWU1 Q9BWU1|Q9BWU1-2|F6QTA4 Cyclin-dependent kinase 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13020.13020.3 16.57 16.57 3.348 7 1 1 0 866.3925 2517.199 S449s TMT10 442 (R) LGPSGANsGGPVMPSDYQHSSSR (L) LGPS(0.0)GANS(0.99)GGPVMPS(0.0)DY(0.0)QHS(0.0)S(0.0)S(0.0)R s:Phosphorylated S CDK19 57086.5 1 1 5749.1 16.57 HUMAN 1 3.1671 -5.5855 LGPYEAVTPLTKAAD-p Q12888-2;T1614-p LGPYEAVTPLTKAAD 0.490630337084989 0.00184252820571897 -0.0956666666666667 -0.826333333333333 5.69889510758322 43.0441727191503 -0.0956666666666667 -0.826333333333333 0.269221964677919 4.96115422656031e-05 -1.23073285174702 -11.5891179187583 Q12888 TP53BP1 Q12888.2.T1614.p_TP53BP1 Q12888-2_T1614t _1_1_1614_1614 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23182.23182.2 19.63 19.63 3.288 4 1 1 0 1152.6001 2224.2266 T1614t TMT10 1603 (R) EQYGLGPYEAVtPLTK (A) EQY(0.0)GLGPY(0.0)EAVT(0.99)PLT(0.0)K K:TMT10,t:Phosphorylated T TP53BP1 216167.2 9 65 3.1 2297.07 HUMAN 1 -5.6989 -43.0442 LGQAQAHSQEQ____-p Q96I24;S569-p LGQAQAHSQEQ____ 0.969003701508516 0.967245869098751 -0.00666666666666668 0.00433333333333334 0.267842102862634 0.204504677876457 -0.00666666666666667 0.00433333333333333 0.940190350832705 0.954002542662633 -0.0785805270171623 0.0603978361939922 Q96I24 FUBP3 Q96I24.S569.p_FUBP3 Q96I24_S569s _1_1_569_569 Q96I24 Q96I24|Q96I24-2 Far upstream element-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16873.16873.2 22.48 22.48 8.509 3 1 1 0 1264.5858 2448.2105 S569s TMT10 553 (R) QQVAFYGQTLGQAQAHsQEQ (-) QQVAFY(0.0)GQT(0.0)LGQAQAHS(0.99)QEQ s:Phosphorylated S FUBP3 61981.6 5 9 858.1 210.79 HUMAN 1 -0.2678 0.2045 LGQDLLNSYIENEGK-p O95757;S599-p LGQDLLNSYIENEGK 0.00906323709748594 0.00112205987963851 -1.25766666666667 -1.07633333333333 49.1835659556546 49.3358069942679 -1.25766666666667 -1.07633333333333 1.20682251630971e-05 1.16525050701933e-05 -15.1931039900575 -15.247360333607 O95757 HSPA4L O95757.S599.p_HSPA4L O95757_S599s _1_1_599_599 O95757 O95757|E9PDE8 Heat shock 70 kDa protein 4L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26734.26734.4 17.34 17.34 1.293 2 1 1 0 590.5528 2279.2283 S599s TMT10 591 (R) QLGQDLLNsYIENEGK (M) QLGQDLLNS(0.99)Y(0.0)IENEGK K:TMT10,s:Phosphorylated S HSPA4L 95537.8 3 4 549.3 274.67 HUMAN 1 -49.1836 -49.3358 LGQEPYLSSREIGQS-p A0A087WUZ3;S2043-p LGQEPYLSSREIGQS 0.701641473208462 0.258282071524361 0.0616666666666667 0.110333333333333 2.89247246670078 7.74543550875467 0.0616666666666667 0.110333333333333 0.513751086479443 0.168056939043796 0.698486323745951 1.59047965506933 A0A087WUZ3 NotFound A0A087WUZ3.S2043.p_NotFound A0A087WUZ3_S2043s _1_1_2043_2043 A0A087WUZ3 A0A087WUZ3|Q01082|Q01082-2|Q01082-3 Spectrin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31326.31326.3 12.1 12.1 1.101 4 1 1 0 801.0563 2321.1975 S2043s TMT10 2027 (R) DASVAEAWLLGQEPYLsSR (E) DAS(0.0)VAEAWLLGQEPY(0.0)LS(0.99)S(0.0)R s:Phosphorylated S SPTBN1 275623.3 2 8 233.1 420.49 HUMAN 1 2.8925 7.7454 LGQLSTISPVLYANI-p O14686-3;S2022-p LGQLSTISPVLYANI 0.673166897178502 0.535252274177022 0.057 -0.0666666666666667 3.22013916643478 3.65182102248353 0.057 -0.0666666666666667 0.4764157201736 0.431338176252189 0.764781122629191 -0.84982593357271 O14686 KMT2D O14686.3.S2022.p_KMT2D O14686-3_S2022s_1_1_2022_2022 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.35124.35124.4 7.55 7.55 1.236 7 1 1 0 1088.0514 4268.1916 S2022s N2028n TMT10 2012 (K) DEELGQLSTIsPVLYAnINFPNLKQDYPDWSSR (C) DEELGQLS(0.0)T(0.0)IS(0.99)PVLY(0.0)AN(0.99)IN(0.0)FPN(0.0)LKQDY(0.0)PDWS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S,n:Deamidated KMT2D 600227.3 1 22 17.1 1042.08 HUMAN 1 3.2201 -3.6518 LGQRIYQYIQSRFYR-p Q13627;Y321-p LGQRIYQYIQSRFYR 0.801861786186995 0.954039762437484 -0.046 -0.00699999999999997 1.84611626131726 0.29122989744213 -0.046 -0.00699999999999996 0.653714884944058 0.935140810049942 -0.474447111179495 -0.0852253083812669 Q13627 DYRK1A Q13627.Y321.p_DYRK1A Q13627_Y321y _1_1_321_321 Q13627 Q13627|Q13627-2|Q9Y463|Q9Y463-3|Q9Y463-2|Q13627-5|Q13627-4|Q13627-3 Dual specificity tyrosine-phosphorylation-regulated kinase 1A GG20160819_MSz_CCLE_T4D7_pY_Injection_02.17516.18277.2 17.79 8.85 5.26 3 1 1 0 690.3508 1299.7259 Y321y TMT10 318 (R) IYQyIQSR (F) IY(0.0)QY(0.99)IQS(0.0)R y:Phosphorylated Y DYRK1A 86095.8 9 1 196.1 17.79 HUMAN 1 -1.8461 -0.2912 LGQSASETEEDTVSV-p Q13435;T311-p LGQSASETEEDTVSV 0.145835187369471 0.309181223082069 0.381333333333333 0.102333333333333 17.0351602349357 6.73855357004966 0.381333333333333 0.102333333333333 0.019791739973605 0.211906677886662 3.26956312377667 1.41478988196502 Q13435 SF3B2 Q13435.T311.p_SF3B2 Q13435_T311t _1_1_311_311 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12681.12681.4 20.39 20.39 1.144 8 1 1 0 709.8682 2756.4769 T311t TMT10 302 (R) SSLGQSASEtEEDTVSVSKK (E) S(0.0)S(0.0)LGQS(0.0)AS(0.0)ET(0.99)EEDT(0.0)VS(0.0)VS(0.0)KK K:TMT10,t:Phosphorylated T SF3B2 100339.9 2 6 193.1 462.57 HUMAN 1 17.0352 6.7386 LGQTAQPSPPARDGV-p J3KQR7;S830-p LGQTAQPSPPARDGV 0.875245855173676 0.0701995192535134 -0.0246666666666667 -0.236333333333333 1.13349480822002 15.3405426276379 -0.0246666666666667 -0.236333333333333 0.770283365384622 0.0292378704352725 -0.307036939408001 -2.94059506413045 J3KQR7 NotFound J3KQR7.S830.p_NotFound J3KQR7_S830s _1_1_830_830 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15719.15719.5 23.82 22.84 2.097 4 1 1 0 755.1888 3691.9556 S830s TMT10 812 (R) KPLAAPGDGEGLGQTAQPsPPARDGVYVSANGR (M) KPLAAPGDGEGLGQT(0.0)AQPS(0.99)PPARDGVY(0.0)VS(0.0)ANGR K:TMT10,s:Phosphorylated S CEP170B 172326.6 10 18 51.1 746.11 HUMAN 1 -1.1335 -15.3405 LGRACGVSRPVIACS-p B1AHD1;S100-p LGRACGVSRPVIACS 0.535927633673308 0.0347044489923695 0.0933333333333333 0.284 5.01486901683453 19.6575277527661 0.0933333333333334 0.284 0.315146942705264 0.0108204973927684 1.10678224231769 3.80235406924374 B1AHD1 NotFound B1AHD1.S100.p_NotFound B1AHD1_S100s _1_1_100_100 B1AHD1 B1AHD1|P55769 NHP2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17734.17734.3 11.62 11.62 4.492 3 1 1 0 752.7383 2176.2346 S100s TMT10 96 (R) ACGVsRPVIACSVTIK (E) ACGVS(0.99)RPVIACS(0.0)VT(0.0)IK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SNU13 14855.1 1 1 4151.1 36.58 HUMAN 1 5.0149 19.6575 LGRARSPSPCPFRSS-p P27987;S176-p LGRARSPSPCPFRSS 0.453195332145344 0.193745427131958 -0.162 -0.162666666666667 6.3412596285965 9.37258046135709 -0.162 -0.162666666666667 0.232206320699413 0.115542551533603 -1.34513630940463 -1.87217575946162 P27987 ITPKB P27987.S176.p_ITPKB P27987_S174sS176s_2_2_174_176 P27987 P27987|P27987-2 Inositol-trisphosphate 3-kinase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8897.8897.3 7.59 7.59 99 2 2 2 0 521.8965 1403.7415 S174s S176s TMT10 172 (R) ARsPsPCPFR (S) ARS(1.0)PS(1.0)PCPFR C:Carbamidomethylation,s:Phosphorylated S ITPKB 103230.2 2 15 424.1 319.61 HUMAN 1 -6.3413 -9.3726 LGRDCDMS_______-p Q9NS56;S1045-p LGRDCDMS_______ 0.763420941618536 0.128972970347564 0.0556666666666666 -0.206333333333333 2.24723567723598 11.7246561123206 0.0556666666666667 -0.206333333333333 0.596041408438273 0.0672255538257713 0.562883766369702 -2.28248110324062 Q9NS56 TOPORS Q9NS56.S1045.p_TOPORS Q9NS56_S1045s _1_1_1045_1045 Q9NS56 Q9NS56|Q9NS56-2 E3 ubiquitin-protein ligase Topors HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21426.21426.3 7.53 7.53 7.533 4 1 1 0 680.9539 1960.8798 S1045s TMT10 1031 (R) TSLMSVCLGRDCDMs (-) T(0.0)S(0.0)LMS(0.0)VCLGRDCDMS(0.99) C:Carbamidomethylation,s:Phosphorylated S TOPORS 120222.5 1 12 580.1 266.48 HUMAN 1 2.2472 -11.7247 LGRERLGSFGSITRQ-p Q14315;S2233-p LGRERLGSFGSITRQ 0.0506176118125653 0.0222692068071635 -0.786 -0.554 28.546090186985 22.5683843422043 -0.786 -0.554 0.00139762603244724 0.00553556004241491 -6.00167850564999 -4.44826733496116 Q14315 FLNC Q14315.S2233.p_FLNC Q14315_S2233s _1_1_2233_2233 Q14315 Q14315|Q14315-2 Filamin-C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20491.20491.2 12.3 6 2.108 3 1 1 0 623.8233 1166.6731 S2233s TMT10 2231 (R) LGsFGSITR (Q) LGS(0.99)FGS(0.0)IT(0.0)R s:Phosphorylated S FLNC 293584.3 2 1 6335.1 12.3 HUMAN 1 -28.5461 -22.5684 LGRFSSVSSPQPRSR-p Q9P206-3;S352-p LGRFSSVSSPQPRSR 0.407263395915805 0.213682722288968 0.119333333333333 -0.126 7.20418778188628 8.81833102102325 0.119333333333333 -0.126 0.190362422034048 0.131270426990147 1.49671000021097 -1.77629074625205 Q9P206 KIAA1522 Q9P206.3.S352.p_KIAA1522 Q9P206-3_S352s _1_1_352_352 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10354.10354.2 12.23 8.1 1.218 4 1 1 0 700.8423 1320.7109 S352s TMT10 348 (R) FSSVsSPQPR (S) FS(0.0)S(0.0)VS(0.99)S(0.0)PQPR s:Phosphorylated S KIAA1522 108782.6 6 15 62.1 704.36 HUMAN 1 7.2042 -8.8183 LGRGRKNSFGYRKKR-p Q92615;S498-p LGRGRKNSFGYRKKR 0.272716241187097 0.275780943415972 -0.277666666666667 0.162 10.6891882806139 7.37164779694873 -0.277666666666667 0.162 0.0853259577848612 0.18316193388448 -2.10174264415084 1.52547994966311 Q92615 LARP4B Q92615.S498.p_LARP4B Q92615_S498s _1_1_498_498 Q92615 Q92615 La-related protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8534.8534.3 7.52 7.52 4.789 2 1 1 0 470.5837 1329.7679 S498s TMT10 496 (R) KNsFGYR (K) KNS(0.99)FGY(0.0)R K:TMT10,s:Phosphorylated S LARP4B 80949.9 2 4 332.1 357.69 HUMAN 1 -10.6892 7.3716 LGRGRLGSTGAKMQG-p Q01826-2;S47-p LGRGRLGSTGAKMQG 0.0182939562428931 0.00116489549050732 -1.442 -1.78833333333333 40.87213487128 48.6266229784432 -1.442 -1.78833333333333 8.18062552406108e-05 1.37194816186096e-05 -10.5557750264605 -14.7857577404681 Q01826 SATB1 Q01826.2.S47.p_SATB1 Q01826-2_S47s _1_1_47_47 Q01826-2 Q01826-2|H0YN86 Isoform 2 of DNA-binding protein SATB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4878.4878.2 8.36 4.06 2.191 2 1 1 0 471.7471 862.5195 S47s Hydrogen 45 (R) LGsTGAK (M) LGS(0.99)T(0.0)GAK K:TMT10-Lys-Only,s:Phosphorylated S SATB1 89467.4 4 2 821.1 218.79 HUMAN 1 -40.8721 -48.6266 LGRRSITSPPSTSTT-p Q14938;S268-p LGRRSITSPPSTSTT 0.550983208393473 0.431733553671688 0.0883333333333333 0.0906666666666667 4.77695057240808 4.86021580713712 0.0883333333333334 0.0906666666666667 0.332893214435808 0.326571603959241 1.06301997972983 1.07816579971011 Q14938 NFIX Q14938.S268.p_NFIX Q14938_S268s _1_1_268_268 Q14938 Q14938|Q14938-4|Q14938-2|K7EN08|Q14938-3|Q14938-5|Q14938-6|C9JWJ8 Nuclear factor 1 X-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11489.11489.2 13.53 11.38 1.142 8 1 1 0 872.9599 1664.9471 S268s TMT10 265 (R) SITsPPSTSTTK (R) S(0.0)IT(0.0)S(0.99)PPS(0.0)T(0.0)S(0.0)T(0.0)T(0.0)K K:TMT10,s:Phosphorylated S NFIX 55610.7 4 2 1219.1 165.13 HUMAN 1 4.777 4.8602 LGRSMSYSSQKAQPG-p Q9C0B5;S638-p LGRSMSYSSQKAQPG 0.532341299743931 0.0184681420245719 0.0843333333333333 -0.47 5.06707109869632 23.8563412484104 0.0843333333333333 -0.47 0.311381560024153 0.00411496243703683 1.11633515969128 -4.75425047223892 Q9C0B5 ZDHHC5 Q9C0B5.S638.p_ZDHHC5 Q9C0B5_S638s _1_1_638_638 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8663.8663.2 12.01 12.01 1.125 5 1 1 0 728.3523 1375.7292 S638s TMT10 634 (R) SMSYsSQK (A) S(0.0)MS(0.0)Y(0.0)S(0.99)S(0.0)QK K:TMT10,s:Phosphorylated S ZDHHC5 78285 6 19 134.1 530.74 HUMAN 1 5.0671 -23.8563 LGRVSTHSQEMDSGT-p Q9UKE5;S954-p LGRVSTHSQEMDSGT 0.118863969043184 0.779005251594008 -0.368 0.029 19.2354247704922 1.50241059598368 -0.368 0.029 0.011924976255123 0.707552940864756 -3.71675157297185 0.395510420766413 Q9UKE5 TNIK Q9UKE5.S954.p_TNIK Q9UKE5_S954s _1_1_954_954 Q9UKE5 Q9UKE5|Q9UKE5-8 TRAF2 and NCK-interacting protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11138.11138.3 7.09 7.09 1.223 9 1 1 0 919.7427 2677.2486 S954s TMT10 950 (R) VSTHsQEMDSGTEYGMGSSTK (A) VS(0.0)T(0.0)HS(0.99)QEMDS(0.0)GT(0.0)EY(0.0)GMGS(0.0)S(0.0)T(0.0)K K:TMT10,s:Phosphorylated S TNIK 155453.9 1 44 131.1 535.29 HUMAN 1 -19.2354 1.5024 LGSDEMGSGDELPCD-p Q8TCU6;S1200-p LGSDEMGSGDELPCD 0.0287345795169949 0.00457123761421351 0.686666666666667 0.951 36.0223878287763 34.2601527651118 0.686666666666667 0.951 0.000249897100493173 0.000374959812627027 8.49542067241586 7.82578276773289 Q8TCU6 PREX1 Q8TCU6.S1200.p_PREX1 Q8TCU6_S1200s _1_1_1200_1200 Q8TCU6 Q8TCU6|Q8TCU6-3|Q8TCU6-2 Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19515.19515.5 23.73 22.34 2.18 7 1 1 0 817.9827 4005.9083 S1200s TMT10 1188 (R) SNSSYLGSDEMGsGDELPCDMRIPSDKQDK (L) S(0.0)NS(0.0)S(0.0)Y(0.0)LGS(0.0)DEMGS(0.99)GDELPCDMRIPS(0.0)DKQDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PREX1 188881.6 13 14 379.1 336 HUMAN 1 36.0224 34.2602 LGSGLSLSGLVHPEL-p P49748-3;S545-p LGSGLSLSGLVHPEL 0.414602433785073 0.108079085262527 0.114333333333333 0.328333333333333 7.05636386488149 12.7666058122517 0.114333333333333 0.328333333333333 0.196953459449929 0.0528858414630986 1.47087584720985 2.46776936686177 P49748 ACADVL P49748.3.S545.p_ACADVL P49748-3_S545s _1_1_545_545 P49748-3 P49748-3|P49748-2 Isoform 3 of Very long-chain specific acyl-CoA dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28291.28291.3 17.2 12.97 1.189 4 1 1 0 720.3873 2079.176 S545s TMT10 536 (R) AGLGSGLSLsGLVHPELSR (S) AGLGS(0.0)GLS(0.0)LS(0.99)GLVHPELS(0.0)R s:Phosphorylated S ACADVL 73325.2 1 3 2868.1 67.8 HUMAN 1 7.0564 12.7666 LGSGTRASPDSSSCG-p Q9BRK4;S301-p LGSGTRASPDSSSCG 0.995068398633892 0.113994171801522 -0.00100000000000001 -0.19 0.0435740506728251 12.4376796471004 -0.001 -0.19 0.990016869646154 0.0570468981611096 -0.013100746099161 -2.40896220862396 Q9BRK4 LZTS2 Q9BRK4.S301.p_LZTS2 Q9BRK4_S301s _1_1_301_301 Q9BRK4 Q9BRK4 Leucine zipper putative tumor suppressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12585.12585.3 16.27 16.27 2.612 6 1 1 0 810.718 2350.1619 S301s TMT10 289 (R) VAGGLLGSGTRAsPDSSSCGER (S) VAGGLLGS(0.0)GT(0.0)RAS(0.99)PDS(0.0)S(0.0)S(0.0)CGER C:Carbamidomethylation,s:Phosphorylated S LZTS2 73442.7 2 6 710.1 238.65 HUMAN 1 -0.0436 -12.4377 LGSKRMDSLKWDQPI-p O95873;S90-p LGSKRMDSLKWDQPI 0.596424365481188 0.715223919606163 0.074 -0.0423333333333333 4.14314839212907 2.003030725134 0.074 -0.0423333333333333 0.385199008681488 0.630517184339488 0.944395530121137 -0.509413933420325 O95873 C6orf47 O95873.S90.p_C6orf47 O95873_S90s _1_1_90_90 O95873 O95873 Uncharacterized protein C6orf47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17242.17242.5 12.24 9.74 6.183 6 1 1 0 760.5963 3718.979 S90s TMT10 87 (K) RMDsLKWDQPISSTQESGRLEAGGASPK (L) RMDS(0.99)LKWDQPIS(0.0)S(0.0)T(0.0)QES(0.0)GRLEAGGAS(0.0)PK K:TMT10,s:Phosphorylated S C6orf47 31880.5 3 1 1923.1 106.86 HUMAN 1 4.1431 -2.003 LGSLSARSDSEATIS-p Q5SW79;S1165-p LGSLSARSDSEATIS 0.233628206047255 0.213817394042526 0.331 -0.178666666666667 12.1256654125806 8.81459213953648 0.331 -0.178666666666667 0.0612961868831888 0.131383487579088 2.35464412547 -1.77564406892522 Q5SW79 CEP170 Q5SW79.S1165.p_CEP170 Q5SW79_S1165s _1_1_1165_1165 Q5SW79 Q5SW79|Q5SW79-3|Q5SW79-2 Centrosomal protein of 170 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12286.12286.3 14.9 14.9 1.15 6 1 1 0 653.6633 1879.0082 S1165s TMT10 1158 (R) LGSLSARsDSEATISR (S) LGS(0.0)LS(0.0)ARS(0.99)DS(0.0)EAT(0.0)IS(0.0)R s:Phosphorylated S CEP170 175689.3 1 20 128.1 537.52 HUMAN 1 12.1257 -8.8146 LGSLTGASPCQSPCV-p Q86UU1;S551-p LGSLTGASPCQSPCV 0.670744773335509 0.944232842957325 0.062 -0.0116666666666666 3.24832377952968 0.358466422424538 0.062 -0.0116666666666667 0.47333391357344 0.920774657642806 0.770413735612808 -0.104176114931472 Q86UU1 PHLDB1 Q86UU1.S551.p_PHLDB1 Q86UU1_S539sS551s_2_2_539_551 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24937.24937.3 9.41 7.55 1.113 9 2 2 0 1139.5194 3256.604 S539s S551s TMT10 532 (K) GSFSGRLsPAYSLGSLTGAsPCQSPCVQR (K) GS(0.0)FS(0.0)GRLS(0.99)PAY(0.0)S(0.0)LGS(0.0)LT(0.0)GAS(0.99)PCQS(0.0)PCVQR C:Carbamidomethylation,s:Phosphorylated S PHLDB1 152129.1 2 28 99.1 600.41 HUMAN 1 3.2483 -0.3585 LGSPGRYSPVHGSQL-p Q86XL3;S919-p LGSPGRYSPVHGSQL 0.388028089322718 0.0859041814942989 0.122666666666667 -0.31 7.60558687162903 14.1093156011093 0.122666666666667 -0.31 0.173556671609932 0.0388211538909897 1.56665575510565 -2.71136925988255 Q86XL3 ANKLE2 Q86XL3.S919.p_ANKLE2 Q86XL3_S919s _1_1_919_919 Q86XL3 Q86XL3|Q86XL3-3 Ankyrin repeat and LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10616.10616.4 15.76 10.11 1.879 6 1 1 0 832.9395 3248.7653 S919s TMT10 900 (R) NSVAGSNPAKPGLGSPGRYsPVHGSQLR (R) NS(0.0)VAGS(0.0)NPAKPGLGS(0.0)PGRY(0.0)S(0.99)PVHGS(0.0)QLR K:TMT10,s:Phosphorylated S ANKLE2 104968.3 1 13 897.1 204.02 HUMAN 1 7.6056 -14.1093 LGSPLAASKECLSVW-p Q9H8H0;S283-p LGSPLAASKECLSVW 0.188778224113783 0.609376440615843 -0.223 -0.0763333333333333 14.1846991560006 2.92308410715231 -0.223 -0.0763333333333333 0.0381531222753265 0.51014259767066 -2.72689301148113 -0.704648589066783 Q9H8H0 NOL11 Q9H8H0.S283.p_NOL11 Q9H8H0_S283s _1_1_283_283 Q9H8H0 Q9H8H0 Nucleolar protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26992.26992.4 17.65 13.67 3.279 3 1 1 0 722.1436 2805.5875 S283s TMT10 261 (R) NGVALTALDQDHVAVLGSPLAAsK (E) NGVALT(0.0)ALDQDHVAVLGS(0.0)PLAAS(0.99)K K:TMT10,s:Phosphorylated S NOL11 82092 1 2 5622.1 17.65 HUMAN 1 -14.1847 -2.9231 LGSPRTLSGSSDRDF-p A0A1B0GW72;S281-p LGSPRTLSGSSDRDF 0.0530637440823008 0.0115551311988342 -0.545 -0.384 27.6912088266298 27.10827612131 -0.545 -0.384 0.00170168479107076 0.00194613242172717 -5.75928602588558 -5.59057379820781 A0A1B0GW72 NotFound A0A1B0GW72.S281.p_NotFound A0A1B0GW72_S281s _1_1_281_281 A0A1B0GW72 A0A1B0GW72 Pleckstrin homology domain-containing family G member 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11361.11361.2 10.36 10.36 2.34 4 1 1 0 940.4647 1799.954 S281s TMT10 279 (R) TLsGSSDRDFEK (V) T(0.0)LS(0.99)GS(0.0)S(0.0)DRDFEK K:TMT10,s:Phosphorylated S PLEKHG4B 181102.6 1 2 1118.1 175.42 HUMAN 1 -27.6912 -27.1083 LGSSGLGSASSIQAA-p Q7Z6Z7;S3757-p LGSSGLGSASSIQAA 0.495020307487053 0.313293307175524 -0.114666666666667 -0.0983333333333333 5.62419440587472 6.66301592590469 -0.114666666666667 -0.0983333333333333 0.273892764426229 0.21562464996749 -1.21731526693481 -1.40151847026389 Q7Z6Z7 HUWE1 Q7Z6Z7.S3757.p_HUWE1 Q7Z6Z7_S3757s _1_1_3757_3757 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20210.20210.2 18.34 11.68 2.165 5 1 1 0 935.4855 1789.9969 S3757s TMT10 3750 (R) LGSSGLGsASSIQAAVR (Q) LGS(0.0)S(0.0)GLGS(0.99)AS(0.0)S(0.0)IQAAVR s:Phosphorylated S HUWE1 485818.9 3 61 11.1 1210.45 HUMAN 1 -5.6242 -6.663 LGSVPGGSITKGIPS-p Q9Y618;S1215-p LGSVPGGSITKGIPS 0.297363320224585 0.0277238968700976 0.164 -0.392333333333333 9.90943298772102 21.1078992921106 0.164 -0.392333333333333 0.102107278565799 0.00774836500133511 1.96598007988887 -4.11672787408326 Q9Y618 NCOR2 Q9Y618.S1215.p_NCOR2 Q9Y618_S1215s _1_1_1215_1215 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17786.17786.3 12.57 12.57 1.913 4 1 1 0 594.9976 1703.0104 S1215s TMT10 1205 (R) GTALGSVPGGsITK (G) GT(0.0)ALGS(0.0)VPGGS(0.99)IT(0.0)K K:TMT10,s:Phosphorylated S NCOR2 275540.8 1 16 16.1 1053.89 HUMAN 1 9.9094 -21.1079 LGSWGSLSKSKSSFK-p A0A0A0MSJ9;S555-p LGSWGSLSKSKSSFK 0.0990612726298986 0.261236325907508 -0.509333333333333 -0.117 21.2525556628721 7.68079186722412 -0.509333333333334 -0.117 0.0074945305405849 0.170577134025086 -4.15306861095083 -1.57925289537565 A0A0A0MSJ9 NotFound A0A0A0MSJ9.S555.p_NotFound A0A0A0MSJ9_S555s _1_1_555_555 A0A0A0MSJ9 A0A0A0MSJ9|Q15283|Q15283-2 Ras GTPase-activating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25030.25030.3 12.57 12.57 1.247 5 1 1 0 639.348 1836.0631 S555s TMT10 544 (K) TIQTLGSWGSLsK (S) T(0.0)IQT(0.0)LGS(0.0)WGS(0.0)LS(0.99)K K:TMT10,s:Phosphorylated S RASA2 98367.2 1 2 4441.1 31.35 HUMAN 1 -21.2526 -7.6808 LGTEFEYTDSESEVK-p O15417;T1913-p LGTEFEYTDSESEVK 0.862029975440239 0.190899182079269 0.0253333333333333 0.130666666666667 1.25994884356653 9.45842560768322 0.0251634896418711 0.130666666666667 0.748178313404315 0.113281095229443 0.337870226373883 1.8870365188203 O15417 TNRC18 O15417.T1913.p_TNRC18 O15417_T1913tS1915s_2_2_1913_1915 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26779.26779.3 11.81 11.81 1.326 6 2 2 0 894.0811 2520.2758 T1913t S1915s TMT10 1903 (R) QSLLGTEFEYtDsESEVK (V) QS(0.0)LLGT(0.0)EFEY(0.0)T(0.99)DS(0.99)ES(0.0)EVK K:TMT10,t:Phosphorylated T,s:Phosphorylated S TNRC18 316168 2 35 75.1 647.68 HUMAN 1 1.2599 9.4584 LGTGMERSPGAMERV-p E7ESA6;S73-p LGTGMERSPGAMERV 0.726935837841591 0.0493757833526054 0.054 -0.244333333333333 2.62681918106786 17.475527150712 0.054 -0.244333333333333 0.546157726362687 0.0178832844695046 0.643539475462895 -3.35424309812454 E7ESA6 NotFound E7ESA6.S73.p_NotFound E7ESA6_S73s _1_1_73_73 E7ESA6 E7ESA6|Q05397-5|Q05397-7|E5RFW9|E5RG54 Focal adhesion kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7013.7013.3 14.12 14.12 3.205 3 1 1 0 680.3187 1958.9738 S73s TMT10 64 (K) THLGTGMERsPGAMER (V) T(0.0)HLGT(0.0)GMERS(0.99)PGAMER s:Phosphorylated S PTK2 124992.4 6 1 979.1 192.68 HUMAN 1 2.6268 -17.4755 LGTRADESQEPQSQV-p Q9NR34;S164-p LGTRADESQEPQSQV 0.190090053214613 0.0281259447324676 0.207333333333333 0.449333333333333 14.1092596900664 21.0185158324363 0.207333333333333 0.449333333333333 0.0388216536774851 0.00790948882438204 2.71300088257536 4.09693955558448 Q9NR34 MAN1C1 Q9NR34.S164.p_MAN1C1 Q9NR34_S164s _1_1_164_164 Q9NR34 Q9NR34 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5228.5228.2 11.6 11.6 1.754 2 1 1 0 841.8861 1602.7921 S164s TMT10 161 (R) ADEsQEPQSQVR (A) ADES(0.99)QEPQS(0.0)QVR s:Phosphorylated S MAN1C1 71137.5 1 1 6450.1 11.6 HUMAN 1 14.1093 21.0185 LGTRNDLSPTTVMSE-p P30043;S82-p LGTRNDLSPTTVMSE 0.796313559448739 0.433950231031175 0.0473333333333333 0.082 1.90995218473542 4.83105090227552 0.0473333333333333 0.082 0.644176357775086 0.328772065251261 0.488766653894324 1.07279374275535 P30043 BLVRB P30043.S82.p_BLVRB P30043_S82s _1_1_82_82 P30043 P30043|M0R192|M0QZL1 Flavin reductase (NADPH) HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31363.31363.4 19.54 20.42 1.161 6 1 1 0 820.9243 3200.7146 S82s TMT10 64 (K) TVAGQDAVIVLLGTRNDLsPTTVMSEGAR (N) T(0.0)VAGQDAVIVLLGT(0.0)RNDLS(0.99)PT(0.0)T(0.0)VMS(0.0)EGAR s:Phosphorylated S BLVRB 22233.1 1 1 5417.1 19.54 HUMAN 1 1.91 4.8311 LGTSEEDSMVGTLYD-p Q9HB07;S155-p LGTSEEDSMVGTLYD 0.518057423197374 0.0264534344281198 0.0883333333333333 0.328 5.27635798545314 21.4171545078203 0.0883333333333333 0.328 0.296731875429088 0.00721580102743212 1.15446957152276 4.18562904608979 Q9HB07 NotFound Q9HB07.S155.p_NotFound Q9HB07_S155s _1_1_155_155 Q9HB07 Q9HB07|F8VQQ3 UPF0160 protein MYG1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36727.36727.3 14.73 14.73 1.672 5 1 1 0 941.1509 2741.4683 S155s TMT10 143 (K) LLAQLLGTSEEDsMVGTLYDK (M) LLAQLLGT(0.0)S(0.0)EEDS(0.99)MVGT(0.0)LY(0.0)DK K:TMT10,s:Phosphorylated S C12orf10 42790.8 2 3 3637.1 46.39 HUMAN 1 5.2764 21.4172 LGTSHLGTPPALPRK-p O43283;T797-p LGTSHLGTPPALPRK 0.652911308934577 0.892932419775341 0.075 -0.014 3.47089118149861 0.689830546487151 0.075 -0.014 0.449687568581006 0.853133401023858 0.814535060535796 -0.194139085014225 O43283 MAP3K13 O43283.T797.p_MAP3K13 O43283_T797t _1_1_797_797 O43283 O43283 Mitogen-activated protein kinase kinase kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15441.15441.3 15.19 15.19 2.341 6 1 1 0 706.03 2036.0974 T797t TMT10 786 (R) SESSLGTSHLGtPPALPR (K) S(0.0)ES(0.0)S(0.0)LGT(0.0)S(0.0)HLGT(0.99)PPALPR t:Phosphorylated T MAP3K13 109492.3 1 2 4520.1 30.38 HUMAN 1 3.4709 -0.6898 LGVAFKISKEVLAGR-p Q00839;S435-p LGVAFKISKEVLAGR 0.665854012351503 0.013271733212951 -0.076 0.412333333333333 3.30214017999547 26.1093214162337 -0.076 0.412333333333333 0.467504700694043 0.00244944593710565 -0.781139802487529 5.32330101912515 Q00839 HNRNPU Q00839.S435.p_HNRNPU Q00839_S435s _1_1_435_435 Q00839 Q00839|Q00839-2|A0A1W2PPS1|A0A1X7SBS1|Q5RI18|A0A1W2PPH7|A0A1W2PPL4|A0A1W2PP34|A0A1W2PQ74 Heterogeneous nuclear ribonucleoprotein U HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20612.20612.3 13.85 13.85 99 1 1 1 0 715.4089 2064.242 S435s TMT10 424 (K) NGQDLGVAFKIsK (E) NGQDLGVAFKIS(1.0)K K:TMT10,s:Phosphorylated S HNRNPU 91324.5 1 11 657.1 253.07 HUMAN 1 -3.3021 26.1093 LGVDKNASEDEIKKA-p Q99615;S393-p LGVDKNASEDEIKKA 0.695905505409357 0.115959839612514 0.0546666666666667 -0.193333333333333 2.95772756813511 12.342533159332 0.0546666666666667 -0.193333333333333 0.506089402381797 0.058310489077282 0.711813135873276 -2.39200813904013 Q99615 DNAJC7 Q99615.S393.p_DNAJC7 Q99615_S393s _1_1_393_393 Q99615 Q99615|Q99615-2 DnaJ homolog subfamily C member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19710.19710.4 14.9 10.12 99 1 1 1 0 575.32 2218.2898 S393s TMT10 385 (K) ILGVDKNAsEDEIK (K) ILGVDKNAS(1.0)EDEIK K:TMT10,s:Phosphorylated S DNAJC7 57238.6 4 1 3074.1 61.42 HUMAN 1 2.9577 -12.3425 LGVIFGPSLIRPRPT-p Q52LW3;S849-p LGVIFGPSLIRPRPT 0.992500838833107 0.772249621887867 0.00166666666666667 -0.0406666666666666 0.0700789538805962 1.55259231025807 0.00166666666666667 -0.0406666666666666 0.983993216795839 0.699424383917169 0.0210066342379032 -0.407227530226827 Q52LW3 ARHGAP29 Q52LW3.S849.p_ARHGAP29 Q52LW3_S849sT856tT857t_3_3_849_857 Q52LW3 Q52LW3|F8VWZ8 Rho GTPase-activating protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28611.28611.3 7.15 3.98 6.872 8 3 3 0 1337.3389 3769.0962 S849s T856t T857t N870n TMT10 841 (K) NLGVIFGPsLIRPRPttAPITISSLAEYSnQAR (L) N(0.0)LGVIFGPS(0.99)LIRPRPT(0.99)T(0.99)APIT(0.0)IS(0.0)S(0.0)LAEY(0.0)S(0.0)N(0.99)QAR s:Phosphorylated S,t:Phosphorylated T,n:Deamidated ARHGAP29 143601.5 1 20 517.1 284.75 HUMAN 1 0.0701 -1.5526 LGVSGEPSPCTSTNR-p A0A1W2PQ72;S225-p LGVSGEPSPCTSTNR 0.539990279840077 0.528619281766652 0.109 0.062 4.94071311758452 3.72237956098647 0.109 0.062 0.320574289384087 0.424386972598131 1.0931821794859 0.863536782691313 A0A1W2PQ72 NotFound A0A1W2PQ72.S225.p_NotFound A0A1W2PQ72_S225s _1_1_225_225 A0A1W2PQ72 A0A1W2PQ72 Uncharacterized protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11060.11060.2 12.66 12.66 1.779 5 1 1 0 935.9342 1790.8904 S225s TMT10 218 (R) LGVSGEPsPCTSTNR (S) LGVS(0.0)GEPS(0.99)PCT(0.0)S(0.0)T(0.0)NR C:Carbamidomethylation,s:Phosphorylated S 40159.2 2 2 4781.1 26.72 HUMAN 1 4.9407 3.7224 LGVTGGGSPENGDGA-p Q6ZRS2;S2840-p LGVTGGGSPENGDGA 0.959193479769355 0.294457323104494 -0.00833333333333334 0.105 0.350649598269593 7.01047093485276 -0.00833333333333333 0.105 0.922433443365078 0.199045748852899 -0.101995259650927 1.46244132552561 Q6ZRS2 SRCAP Q6ZRS2.S2840.p_SRCAP Q6ZRS2_S2840s _1_1_2840_2840 Q6ZRS2 Q6ZRS2|Q6ZRS2-2|Q6ZRS2-3|A0A0A0MS59 Helicase SRCAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28719.28719.3 25.42 21.75 2.121 3 1 1 0 1070.2408 3128.7356 S2840s TMT10 2830 (R) HIELGVTGGGsPENGDGALLAITPPAVK (R) HIELGVT(0.0)GGGS(0.99)PENGDGALLAIT(0.0)PPAVK K:TMT10,s:Phosphorylated S SRCAP 345203 14 14 219.1 428.72 HUMAN 1 -0.3506 7.0105 LGVWRLDSPPPSPIT-p Q9C0C2;S494-p LGVWRLDSPPPSPIT 0.400028642815168 0.0523129471927482 0.12 0.257 7.34296188349203 17.0987542843477 0.12 0.257 0.184375754971599 0.0195040396682998 1.52092333567064 3.27959349038133 Q9C0C2 TNKS1BP1 Q9C0C2.S494.p_TNKS1BP1 Q9C0C2_S494s _1_1_494_494 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.31024.31024.2 23.55 16.3 4.491 6 1 1 0 1573.7634 3066.5429 S494s TMT10 492 (R) LDsPPPSPITEASEAAEAAEAGNLAVSSR (E) LDS(0.99)PPPS(0.0)PIT(0.0)EAS(0.0)EAAEAAEAGNLAVS(0.0)S(0.0)R s:Phosphorylated S TNKS1BP1 182819.3 36 17 4.1 2105.7 HUMAN 1 7.343 17.0988 LGYEPEGSASPTPPY-p O15169;S75-p LGYEPEGSASPTPPY 0.705318681884225 0.579373333192034 0.0511666666666667 0.0528333333333333 2.85143401222033 3.19885431199077 0.0511666666666667 0.0528333333333334 0.518628762798608 0.47875637370931 0.690071881720226 0.760409532584679 O15169 AXIN1 O15169.S75.p_AXIN1 O15169_S75sS77s_2_2_75_77 O15169 O15169|O15169-2 Axin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24110.24110.3 15.47 13.15 1.757 6 2 2 0 1004.1447 2850.4926 S75s S77s TMT10 63 (R) RSDLDLGYEPEGsAsPTPPYLK (W) RS(0.0)DLDLGY(0.0)EPEGS(0.99)AS(0.99)PT(0.0)PPY(0.0)LK K:TMT10,s:Phosphorylated S AXIN1 96546.1 1 4 3085.1 61.16 HUMAN 2 2.8514 3.1989 LGYERTPSQCRERIK-p Q6P1R3;S163-p LGYERTPSQCRERIK 0.327849036755755 0.506440437477525 0.168 0.0723333333333333 9.05788357336177 3.9587940339606 0.168 0.0723333333333333 0.124225754356604 0.401902397197508 1.81838341198661 0.909092007930966 Q6P1R3 MSANTD2 Q6P1R3.S163.p_MSANTD2 Q6P1R3_S163s _1_1_163_163 Q6P1R3 Q6P1R3|Q6P1R3-3|E9PPE2|B4E1M0 Myb/SANT-like DNA-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14085.14085.3 13.08 13.08 1.809 3 1 1 0 687.3297 1980.017 S163s TMT10 152 (R) ALAELGYERTPsQCR (E) ALAELGY(0.0)ERT(0.0)PS(0.99)QCR C:Carbamidomethylation,s:Phosphorylated S MSANTD2 61945.8 1 5 1991.1 103.76 HUMAN 1 9.0579 3.9588 LHALKLRSPDASPSR-p O95467;S170-p LHALKLRSPDASPSR 0.980051969422018 0.819787524961588 0.00699999999999999 0.0303333333333334 0.174031527854077 1.20779242858363 0.00699999999999999 0.0303333333333334 0.960720034062263 0.757217700134107 0.0515719651335417 0.325185405525397 O95467 GNAS O95467.S170.p_GNAS O95467_S170s _1_1_170_170 O95467 O95467 Neuroendocrine secretory protein 55 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4634.4634.3 10.14 10.14 10.144 3 1 1 0 465.5714 1314.7327 S170s TMT10 168 (K) LRsPDASPSR (A) LRS(0.99)PDAS(0.0)PS(0.0)R s:Phosphorylated S GNAS 28256.4 1 1 4837.1 26.06 HUMAN 1 0.174 1.2078 LHCRVRYSQLLGLHE-p Q15036;S38-p LHCRVRYSQLLGLHE 0.0360407965324359 0.0341414073985291 -0.557 -0.356333333333333 33.2156841464696 19.7634857652261 -0.557 -0.356333333333333 0.000476904681146581 0.0105596961915131 -7.47338746148175 -3.82484955672535 Q15036 SNX17 Q15036.S38.p_SNX17 Q15036_S38s _1_1_38_38 Q15036 Q15036|F8WAZ0 Sorting nexin-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20396.20396.3 15.3 15.3 15.303 2 1 1 0 674.3695 1941.1231 S38s TMT10 35 (R) VRYsQLLGLHEQLR (K) VRY(0.0)S(0.99)QLLGLHEQLR s:Phosphorylated S SNX17 53185.6 2 1 1175.1 169.84 HUMAN 1 -33.2157 -19.7635 LHDFLAHSSEESEET-p P46100;S25-p LHDFLAHSSEESEET 0.337963113037878 0.573763212763696 0.474 -0.0666666666666667 8.77314526228599 3.25207137146686 0.474 -0.0666666666666667 0.132643347562022 0.472925642847948 1.76909405771425 -0.771048336306663 P46100 ATRX P46100.S25.p_ATRX P46100_S25s _1_1_25_25 P46100 P46100|P46100-4|P46100-6|A0A087WWG0 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13214.13214.3 22.09 22.09 1.34 6 1 1 0 855.3897 2484.184 S25s TMT10 18 (K) LHDFLAHsSEESEETSSPPR (L) LHDFLAHS(0.99)S(0.0)EES(0.0)EET(0.0)S(0.0)S(0.0)PPR s:Phosphorylated S ATRX 285034.2 1 1 18.1 1035.36 HUMAN 1 8.7731 -3.2521 LHEDLDESDDDMDEK-p O43150;S701-p LHEDLDESDDDMDEK 0.34762033464647 0.0805568106252645 -0.159666666666667 0.281333333333333 8.52554974345404 14.5106752940457 -0.159666666666667 0.281333333333333 0.140425191775463 0.035394230153719 -1.72623060899958 2.78542640876352 O43150 ASAP2 O43150.S701.p_ASAP2 O43150_S701s _1_1_701_701 O43150 O43150|O43150-2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17690.17690.3 24.83 22.9 99 1 1 1 0 819.6978 2377.1117 S701s TMT10 693 (R) LLHEDLDEsDDDMDEK (L) LLHEDLDES(1.0)DDDMDEK K:TMT10,s:Phosphorylated S ASAP2 112903.8 10 2 1037.1 185.54 HUMAN 1 -8.5255 14.5107 LHEHRDGSPTDRSWG-p Q8NC24;S187-p LHEHRDGSPTDRSWG 0.449930469768503 0.0221420189415373 0.203333333333333 -0.567333333333333 6.40857714653146 22.6038131975323 0.203333333333333 -0.567333333333333 0.22863477433476 0.00549058577095772 1.35703647520689 -4.45650852113775 Q8NC24 RELL2 Q8NC24.S187.p_RELL2 Q8NC24_S187s _1_1_187_187 Q8NC24 Q8NC24|E5RFS6 RELT-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3198.3198.4 10.57 10.57 1.4 3 1 1 0 527.0024 2025.0212 S187s TMT10 177 (K) RYGLHEHRDGsPTDR (S) RY(0.0)GLHEHRDGS(0.99)PT(0.0)DR s:Phosphorylated S RELL2 32689.9 3 1 5071.1 23.31 HUMAN 1 6.4086 -22.6038 LHENGDDSLSPRLGW-p Q9BVI0;S878-p LHENGDDSLSPRLGW 0.134264480831341 0.49836421593337 0.454333333333333 0.074 17.9033713332677 4.04686751816047 0.454333333333333 0.074 0.0162055161011158 0.393834037885836 3.44273587864068 0.925919648919733 Q9BVI0 PHF20 Q9BVI0.S878.p_PHF20 Q9BVI0_S878sS880s_2_2_878_880 Q9BVI0 Q9BVI0 PHD finger protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19709.19709.3 9.79 9.79 9.786 3 2 2 0 890.0518 2508.2164 S878s S880s TMT10 861 (R) GSALDDAVNPLHENGDDsLsPR (L) GS(0.0)ALDDAVNPLHENGDDS(0.99)LS(0.99)PR s:Phosphorylated S PHF20 116810 1 7 1726.1 119.34 HUMAN 1 17.9034 4.0469 LHGDDQDSEDEVLTI-p P11717;S2409-p LHGDDQDSEDEVLTI 0.234638852807748 0.30678371065448 0.184333333333333 -0.107333333333333 12.0734277820039 6.78107268742801 0.184333333333333 -0.107333333333333 0.062037919055444 0.209842151912982 2.34536540915791 -1.42225336815999 P11717 IGF2R P11717.S2409.p_IGF2R P11717_S2409s _1_1_2409_2409 P11717 P11717 Cation-independent mannose-6-phosphate receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24595.24595.3 21.91 17.31 5.359 4 1 1 0 1012.5076 2955.5199 S2409s TMT10 2398 (K) ALSSLHGDDQDsEDEVLTIPEVK (V) ALS(0.0)S(0.0)LHGDDQDS(0.99)EDEVLT(0.0)IPEVK K:TMT10,s:Phosphorylated S IGF2R 281330.5 12 5 1952.1 105.32 HUMAN 1 12.0734 -6.7811 LHGEFSASDSSLTDI-p O43166;S1647-p LHGEFSASDSSLTDI 0.161399952713632 0.0408045486118973 0.233666666666667 0.312 15.8562466248348 18.6234709520743 0.233666666666667 0.312 0.0259642234183964 0.0137294425705269 3.04063653079386 3.58649612499969 O43166 SIPA1L1 O43166.S1647.p_SIPA1L1 O43166_S1647s _1_1_1647_1647 O43166 O43166|O43166-2|O43166-3|F5GYF8 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17171.17171.3 20.87 20.87 1.2 7 1 1 0 830.386 2409.1731 S1647s TMT10 1639 (K) SLHGEFSAsDSSLTDIQETR (R) S(0.0)LHGEFS(0.0)AS(0.99)DS(0.0)S(0.0)LT(0.0)DIQET(0.0)R s:Phosphorylated S SIPA1L1 201223.1 1 30 46.1 777.88 HUMAN 1 15.8562 18.6235 LHGRSDESDQQESLH-p P49770;S103-p LHGRSDESDQQESLH 0.132941631546161 0.371310150345355 -0.399 -0.23 18.0718792213558 5.70781557983982 -0.399 -0.23 0.0155887781997786 0.268669546351856 -3.47682686919685 -1.2320535192332 P49770 EIF2B2 P49770.S103.p_EIF2B2 P49770_S103s _1_1_103_103 P49770 P49770|G3V5E5 Translation initiation factor eIF-2B subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5041.5041.3 10.92 10.92 1.161 3 1 1 0 571.2509 1631.771 S103s Hydrogen 100 (R) SDEsDQQESLHK (L) S(0.0)DES(0.99)DQQES(0.0)LHK K:TMT10-Lys-Only,s:Phosphorylated S EIF2B2 39217.2 1 1 6560.1 10.92 HUMAN 1 -18.0719 -5.7078 LHIMEDDSMEEKPLK-p P29375;S1488-p LHIMEDDSMEEKPLK 0.64186632771165 0.788583851448936 0.063 -0.0683333333333333 3.59774443663127 1.43265262670691 0.063 -0.0683333333333333 0.43674260114601 0.719009680028081 0.839412259535486 -0.379100853339426 P29375 KDM5A P29375.S1488.p_KDM5A P29375_S1488s _1_1_1488_1488 P29375 P29375|P29375-2 Lysine-specific demethylase 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23754.23754.5 16.92 12.44 1.756 3 1 1 0 815.6229 3994.1021 S1488s TMT10 1468 (R) ILQATHPPSEDRFLHIMEDDsMEEKPLK (V) ILQAT(0.0)HPPS(0.0)EDRFLHIMEDDS(0.99)MEEKPLK K:TMT10,s:Phosphorylated S KDM5A 194944.7 3 8 446.1 309.57 HUMAN 1 3.5977 -1.4327 LHIRSSMSGLHLVKQ-p Q13085;S80-p LHIRSSMSGLHLVKQ 0.916963697628859 0.0384554223233359 -0.0273333333333333 -0.451333333333333 0.734059484418185 19.0099124088856 -0.0273333333333334 -0.451333333333333 0.844489106117434 0.0125605529631556 -0.205771894176323 -3.66639871046966 Q13085 ACACA Q13085.S80.p_ACACA Q13085_S80s _1_1_80_80 Q13085 Q13085-4|Q13085-2 Acetyl-CoA carboxylase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17278.17278.2 14.78 9.43 2.492 3 1 1 0 798.9339 1516.8922 S80s TMT10 77 (R) SSMsGLHLVK (Q) S(0.0)S(0.0)MS(0.99)GLHLVK K:TMT10,s:Phosphorylated S ACACA 267260.7 13 5 860.1 210.55 HUMAN 1 -0.7341 -19.0099 LHKEQTVSETLGPGG-p Q6ZRV2;S716-p LHKEQTVSETLGPGG 0.90552186362789 0.323580210084006 -0.018 -0.0953333333333333 0.848345573481463 6.47959263664992 -0.018 -0.0953333333333333 0.82255593948729 0.224926557452793 -0.235392598618382 -1.36922393971364 Q6ZRV2 FAM83H Q6ZRV2.S716.p_FAM83H Q6ZRV2_S716s _1_1_716_716 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14421.14421.2 16.4 16.4 1.142 3 1 1 0 969.9739 1858.9708 S716s TMT10 712 (K) EQTVsETLGPGGEAVR (S) EQT(0.0)VS(0.99)ET(0.0)LGPGGEAVR s:Phosphorylated S FAM83H 127633.5 2 14 7.1 1347.23 HUMAN 1 -0.8483 -6.4796 LHKGDSDSEEDEPTK-p Q92733;S159-p LHKGDSDSEEDEPTK 0.586985109883825 0.0136424890302829 -0.0806666666666667 0.508333333333333 4.25762198601504 25.9195452609895 -0.0806666666666667 0.508333333333333 0.375178377918285 0.00255885380413189 -0.966064963483734 5.27360327819717 Q92733 PRCC Q92733.S159.p_PRCC Q92733_S159s _1_1_159_159 Q92733 Q92733 Proline-rich protein PRCC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13885.14091.4 23.44 17.13 1.105 3 1 1 0 734.6197 2855.4878 S159s TMT10 147 (K) IAAPELHKGDSDsEEDEPTK (K) IAAPELHKGDS(0.0)DS(0.99)EEDEPT(0.0)K K:TMT10,s:Phosphorylated S PRCC 52416.8 2 5 1101.1 177.58 HUMAN 1 -4.2576 25.9195 LHKLKSPSQDNTDSY-p Q9UJF2-2;S806-p LHKLKSPSQDNTDSY 0.178102411142301 0.00328025986353581 -0.26 -0.684333333333333 14.8098005221797 37.2087633092967 -0.26 -0.684333333333333 0.0330384715742501 0.000190161970531665 -2.84285463904715 -8.94404807880194 Q9UJF2 RASAL2 Q9UJF2.2.S806.p_RASAL2 Q9UJF2-2_S806s _1_1_806_806 Q9UJF2-2 Q9UJF2-2 Isoform 2 of Ras GTPase-activating protein nGAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15001.15001.3 11.63 11.63 1.25 5 1 1 0 732.6971 2116.1075 S806s TMT10 802 (K) LKSPsQDNTDSYFR (G) LKS(0.0)PS(0.99)QDNT(0.0)DS(0.0)Y(0.0)FR K:TMT10,s:Phosphorylated S RASAL2 145265.6 2 36 281.2 388.28 HUMAN 1 -14.8098 -37.2088 LHKPPADSGVDLREV-p O15427;S436-p LHKPPADSGVDLREV 0.288657613845318 0.856534631633434 -0.230666666666667 -0.0216666666666667 10.1761162154636 0.947864503430658 -0.230666666666667 -0.0216666666666667 0.0960258982719858 0.803921326198712 -2.01232515639496 -0.26072366671119 O15427 SLC16A3 O15427.S436.p_SLC16A3 O15427_S436s _1_1_436_436 O15427 O15427 Monocarboxylate transporter 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22170.22170.5 17.27 12.08 99 1 1 1 0 611.7408 2974.7081 S436s TMT10 429 (K) LHKPPADsGVDLREVEHFLK (A) LHKPPADS(1.0)GVDLREVEHFLK K:TMT10,s:Phosphorylated S SLC16A3 50096.1 3 1 3776.1 43.33 HUMAN 1 -10.1761 -0.9479 LHLECRGSSGKKCQG-p Q9HCE0;S1589-p LHLECRGSSGKKCQG 0.890046614604404 0.140013919486823 0.0243333333333333 0.205666666666667 0.987910645216676 11.2518845279152 0.0243333333333333 0.205666666666667 0.796542468236874 0.0749568879386779 0.270843184906516 2.19927968599928 Q9HCE0 EPG5 Q9HCE0.S1589.p_EPG5 Q9HCE0_S1589s _1_1_1589_1589 Q9HCE0 Q9HCE0|Q9HCE0-2|K7EPN4 Ectopic P granules protein 5 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7762.7762.5 13.17 13.17 1.175 4 1 1 0 546.2895 2647.4441 S1589s TMT10 1577 (R) EEQTTLHLECRGsSGKK (C) EEQT(0.0)T(0.0)LHLECRGS(0.99)S(0.0)GKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EPG5 295385 2 3 3256.1 55.74 HUMAN 1 0.9879 11.2519 LHLKSDMSECENDDP-p Q15058;S45-p LHLKSDMSECENDDP 0.886118944763575 0.830562297692722 -0.021 -0.0313333333333333 1.02509413754864 1.1276830406728 -0.021 -0.0313333333333333 0.789751730578255 0.77131485548491 -0.280161236538183 -0.305576042198286 Q15058 KIF14 Q15058.S45.p_KIF14 Q15058_S45s _1_1_45_45 Q15058 Q15058 Kinesin-like protein KIF14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17068.17068.3 11.83 11.83 2.371 2 1 1 0 663.9442 1909.8469 S45s TMT10 42 (K) SDMsECENDDPLLR (S) S(0.0)DMS(0.99)ECENDDPLLR C:Carbamidomethylation,s:Phosphorylated S KIF14 187857.6 1 1 1771.1 116.14 HUMAN 1 -1.0251 -1.1277 LHLPELFSPGMLVRC-p Q14690;S144-p LHLPELFSPGMLVRC 0.664425582516381 0.0674153797421507 0.117 0.215666666666667 3.32056657787171 15.5814384561358 0.117 0.215666666666667 0.465525357413541 0.0276602533970562 0.784803719114249 2.98618646053385 Q14690 PDCD11 Q14690.S144.p_PDCD11 Q14690_S144s _1_1_144_144 Q14690 Q14690 Protein RRP5 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36575.36575.3 14.56 14.56 99 1 1 1 0 716.0483 2066.167 S144s TMT10 135 (K) DLLHLPELFsPGMLVR (C) DLLHLPELFS(1.0)PGMLVR s:Phosphorylated S PDCD11 210066.3 1 2 1510.1 135.04 HUMAN 1 3.3206 15.5814 LHLRFLATPPNGNFA-p O75165;T364-p LHLRFLATPPNGNFA 0.738786253352318 0.281276960137963 0.055 0.125 2.49369346774466 7.25957884076451 0.055 0.125 0.563158512614893 0.187949907332406 0.615556398191603 1.50594733271775 O75165 DNAJC13 O75165.T364.p_DNAJC13 O75165_T364t_1_1_364_364 O75165 O75165 DnaJ homolog subfamily C member 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.31436.31436.3 7.47 5.15 0.534 1 1 1 0 683.0084 1966.0384 T364t N367n TMT10 361 (R) FLAtPPnGNFADAVFR (F) FLAT(1.0)PPN(0.50)GN(0.50)FADAVFR t:Phosphorylated T,n:Deamidated DNAJC13 256692.5 1 2 4562.1 29.81 HUMAN 1 2.4937 7.2596 LHLRRVESGGAKSAE-p O15234;S66-p LHLRRVESGGAKSAE 0.492235246826051 0.0108575195071387 0.161 1.40133333333333 5.66876622826546 27.5271726315436 0.161 1.40133333333333 0.271096166995789 0.00176718793093427 1.22532432809819 5.70556772784232 O15234 CASC3 O15234.S66.p_CASC3 O15234_S66s _1_1_66_66 O15234 O15234 Protein CASC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3999.3999.3 7.19 2.85 99 1 1 1 0 447.9146 1261.7629 S66s TMT10 63 (R) RVEsGGAK (S) RVES(1.0)GGAK K:TMT10,s:Phosphorylated S CASC3 76390.7 1 3 323.1 362.08 HUMAN 1 5.6688 27.5272 LHNESKGSPTSAYPE-p Q6ZRV2;S870-p LHNESKGSPTSAYPE 0.199328979709786 0.0170784335194068 -0.507 0.480333333333333 13.6305006615899 24.3833964740188 -0.507 0.480333333333333 0.0433460905444134 0.00364468796402338 -2.62532462366553 4.8833861290578 Q6ZRV2 FAM83H Q6ZRV2.S870.p_FAM83H Q6ZRV2_S870s _1_1_870_870 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6838.6861.2 14.44 7.34 1.576 4 1 1 0 687.3185 1293.6636 S870s TMT10 869 (K) GsPTSAYPER (K) GS(0.99)PT(0.0)S(0.0)AY(0.0)PER s:Phosphorylated S FAM83H 127633.5 6 18 7.1 1347.23 HUMAN 1 -13.6305 24.3834 LHNGDLCSPKRSPTS-p Q9ULD2;S1241-p LHNGDLCSPKRSPTS 0.684508678954235 0.273207931204308 0.0583333333333333 -0.111333333333333 3.08772942173986 7.42326611948556 0.0583333333333333 -0.111333333333333 0.49116459969569 0.180997838313762 0.738175493596498 -1.53446905349401 Q9ULD2 MTUS1 Q9ULD2.S1241.p_MTUS1 Q9ULD2_S1241s _1_1_1241_1241 Q9ULD2 Q9ULD2 Microtubule-associated tumor suppressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9192.9192.3 13.56 11.32 99 1 1 1 0 560.2839 1598.8725 S1241s TMT10 1234 (K) LHNGDLCsPK (R) LHNGDLCS(1.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTUS1 142763.7 3 11 645.1 254.81 HUMAN 1 3.0877 -7.4233 LHNPIVQSLEDLEDQ-p Q674X7-3;S361-p LHNPIVQSLEDLEDQ 0.755115471714797 0.0456469716685431 -0.0503333333333333 0.245 2.33215124993364 17.9400470178542 -0.0503333333333333 0.245 0.584500483849037 0.016069238559416 -0.581164575766747 3.44733172946596 Q674X7 KAZN Q674X7.3.S361.p_KAZN Q674X7-3_S361s _1_1_361_361 Q674X7-3 Q674X7|Q674X7-2|Q674X7-3|Q674X7-4 Isoform 3 of Kazrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23084.23084.3 22.05 20.74 99 1 1 1 0 844.1005 2450.3291 S361s TMT10 353 (K) NLHNPIVQsLEDLEDQK (R) NLHNPIVQS(1.0)LEDLEDQK K:TMT10,s:Phosphorylated S KAZN 46553.4 2 4 3086.1 61.12 HUMAN 1 -2.3322 17.94 LHPLGTCSPQDKQKG-p Q8TEW8;S635-p LHPLGTCSPQDKQKG 0.930920423214409 0.371787912277586 0.018 -0.0953333333333333 0.617195737459732 5.70066559845852 0.018 -0.0953333333333333 0.867521858419307 0.2691122331695 0.174892504955176 -1.23077129464009 Q8TEW8 PARD3B Q8TEW8.S635.p_PARD3B Q8TEW8_S635s _1_1_635_635 Q8TEW8 Q8TEW8|Q8TEW8-2|Q8TEW8-3|Q8TEW8-6 Partitioning defective 3 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12905.12905.4 16.15 16.15 1.561 3 1 1 0 648.3269 2510.3186 S635s TMT10 622 (R) RNDNSILHPLGTCsPQDK (Q) RNDNS(0.0)ILHPLGT(0.0)CS(0.99)PQDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PARD3B 133176.7 1 38 65.4 692.2 HUMAN 1 0.6172 -5.7007 LHPPEPKSPGEYVNI-p P35568;S892-p LHPPEPKSPGEYVNI 0.178378609257439 0.211173978943777 0.414666666666667 0.183333333333333 14.7875116197205 8.88571202011312 0.414666666666667 0.183333333333333 0.0332084677853604 0.129249478060932 2.83869299234743 1.78794492775593 P35568 IRS1 P35568.S892.p_IRS1 P35568_S892s _1_1_892_892 P35568 P35568 Insulin receptor substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25402.25402.5 25.36 25.36 2.638 9 1 1 0 1143.7655 5634.8294 S892s TMT10 876 (R) EQQQQQQPLLHPPEPKsPGEYVNIEFGSDQSGYLSGPVAFHSSPSVR (C) EQQQQQQPLLHPPEPKS(0.99)PGEY(0.0)VNIEFGS(0.0)DQS(0.0)GY(0.0)LS(0.0)GPVAFHS(0.0)S(0.0)PS(0.0)VR K:TMT10,s:Phosphorylated S IRS1 132786.8 2 16 229.1 423.14 HUMAN 1 14.7875 8.8857 LHPSCLGSPPLRSAS-p Q14451;S361-p LHPSCLGSPPLRSAS 0.255264993053251 0.128304344651731 -0.205333333333333 -0.184333333333333 11.2779887471698 11.7582759470275 -0.205333333333333 -0.184333333333333 0.0745076945172755 0.0667071529291306 -2.20488410194723 -2.28841658575256 Q14451 GRB7 Q14451.S361.p_GRB7 Q14451_S361s _1_1_361_361 Q14451 Q14451|Q14451-4|Q14451-2 Growth factor receptor-bound protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10093.10093.3 13.57 13.57 1.718 2 1 1 0 593.9688 1699.9264 S361s TMT10 353 (R) HLHPSCLGsPPLR (S) HLHPS(0.0)CLGS(0.99)PPLR C:Carbamidomethylation,s:Phosphorylated S GRB7 60535.8 1 6 1698.1 120.33 HUMAN 1 -11.278 -11.7583 LHPYSPLSPKGRPSS-p Q8WUF5;S113-p LHPYSPLSPKGRPSS 0.168689953351787 0.00332740927341359 -0.296 -0.63 15.423300859032 37.0938294384522 -0.296 -0.63 0.028685994716991 0.000195261695540224 -2.95822507118339 -8.89795729288407 Q8WUF5 PPP1R13L Q8WUF5.S113.p_PPP1R13L Q8WUF5_S113s _1_1_113_113 Q8WUF5 Q8WUF5 RelA-associated inhibitor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17290.17290.3 20.62 20.62 2.947 6 1 1 0 750.3934 2169.1956 S113s TMT10 100 (R) SESAPTLHPYSPLsPK (G) S(0.0)ES(0.0)APT(0.0)LHPY(0.0)S(0.0)PLS(0.99)PK K:TMT10,s:Phosphorylated S PPP1R13L 89431.8 5 5 371.1 339.39 HUMAN 1 -15.4233 -37.0938 LHQCYWKSGEPQSDD-p Q05086;S11-p LHQCYWKSGEPQSDD 0.412161436237322 0.126427538931054 0.120666666666667 0.410333333333333 7.09848232097571 11.8410854565679 0.120666666666667 0.410333333333333 0.195052610861868 0.0654472577620119 1.47824125162401 2.30304766250253 Q05086 UBE3A Q05086.S11.p_UBE3A Q05086_S11sS16sS22s_3_3_11_22 Q05086 Q05086 Ubiquitin-protein ligase E3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.41160.41292.5 7.52 1 1.844 4 3 3 0 924.4444 4378.3206 S11s S16s S22s Acetyl 2 (M) EKLHQCYWKsGEPQsDDIEAsRMKRAAAK (H) EKLHQCY(0.0)WKS(0.99)GEPQS(0.99)DDIEAS(0.99)RMKRAAAK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S UBE3A 101655.7 1 3 4183.1 35.77 HUMAN 1 7.0985 11.8411 LHQPLQGSPTRPASA-p Q7Z591;S1102-p LHQPLQGSPTRPASA 0.349030139499991 0.298035542068359 0.132666666666667 -0.122666666666667 8.49402926801089 6.93933802509414 0.132666666666667 -0.122666666666667 0.141448085350972 0.202332756159688 1.72077271911907 -1.44999329805422 Q7Z591 AKNA Q7Z591.S1102.p_AKNA Q7Z591_S1102s _1_1_1102_1102 Q7Z591 Q7Z591|Q7Z591-2|Q7Z591-7|Q7Z591-8|Q7Z591-5|Q7Z591-4 AT-hook-containing transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10165.10165.5 10.21 10.21 1.381 4 1 1 0 611.9122 2975.5649 S1102s TMT10 1091 (R) LEDSLHQPLQGsPTRPASAFDRPAR (T) LEDS(0.0)LHQPLQGS(0.99)PT(0.0)RPAS(0.0)AFDRPAR s:Phosphorylated S AKNA 155935.2 1 12 737.1 234.85 HUMAN 1 8.494 -6.9393 LHREYCLSPRNQPRR-p Q8NCD3;S448-p LHREYCLSPRNQPRR 0.303412321511454 0.13701485269334 0.184 -0.252666666666667 9.70807507149599 11.3736923607503 0.184 -0.252666666666667 0.106952882269076 0.0728837590880299 1.93103475946898 -2.22067074632736 Q8NCD3 HJURP Q8NCD3.S448.p_HJURP Q8NCD3_S448s _1_1_448_448 Q8NCD3 Q8NCD3|Q8NCD3-2|Q8NCD3-3 Holliday junction recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14180.14180.4 16.62 16.62 8.73 2 1 1 0 508.244 1949.9853 S448s TMT10 438 (R) FDQLHREYCLsPR (N) FDQLHREY(0.0)CLS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S HJURP 84336.4 4 7 596.1 263.83 HUMAN 1 9.7081 -11.3737 LHRKGDRSPEPGQTW-p Q09666;S93-p LHRKGDRSPEPGQTW 0.578848963693325 0.588547744164155 -0.0903333333333333 0.0526666666666667 4.36666881345955 3.11185286054791 -0.0903333333333333 0.0526666666666667 0.365875322840446 0.488443926676998 -0.986601297328459 0.742934208749453 Q09666 AHNAK Q09666.S93.p_AHNAK Q09666_S93s _1_1_93_93 Q09666 Q09666|Q09666-2|E9PJC6 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6950.7406.4 15.04 15.04 8.135 3 1 1 0 539.0282 2073.1242 S93s TMT10 89 (R) KGDRsPEPGQTWTR (E) KGDRS(0.99)PEPGQT(0.0)WT(0.0)R K:TMT10,s:Phosphorylated S AHNAK 629603.7 31 3 1.1 4313.36 HUMAN 1 -4.3667 3.1119 LHRKIHVTPLIPGKS-p Q9H0L4;T198-p LHRKIHVTPLIPGKS 0.308410963773237 0.782663705932497 -0.180333333333333 -0.0266666666666667 9.54918140003662 1.47391158678114 -0.180333333333333 -0.0266666666666667 0.110938390289254 0.712211269462732 -1.90348267862791 -0.38882373908789 Q9H0L4 CSTF2T Q9H0L4.T198.p_CSTF2T Q9H0L4_T198t _1_1_198_198 Q9H0L4 Q9H0L4 Cleavage stimulation factor subunit 2 tau variant HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21750.21750.3 9.49 9.49 99 1 1 1 0 538.3243 1532.9929 T198t TMT10 195 (K) IHVtPLIPGK (S) IHVT(1.0)PLIPGK K:TMT10,t:Phosphorylated T CSTF2T 64663.7 1 4 2570.1 78.15 HUMAN 1 -9.5492 -1.4739 LHRVKIQTVAAKQGE-p Q13618;T676-p LHRVKIQTVAAKQGE 0.339665463153294 0.268862721742058 0.281 0.174 8.72472312413185 7.51203241254863 0.281 0.174 0.134130544495871 0.177335938944187 1.76071209049677 1.54991696060212 Q13618 CUL3 Q13618.T676.p_CUL3 Q13618_T676t _1_1_676_676 Q13618 Q13618 Cullin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12593.12593.2 7.94 7.94 99 1 1 1 0 634.8726 1188.7716 T676t TMT10 674 (K) IQtVAAK (Q) IQT(1.0)VAAK K:TMT10,t:Phosphorylated T CUL3 89499.2 1 3 2686.1 73.98 HUMAN 1 8.7247 7.512 LHSDDSDSDERNSDG-p Q05209;S608-p LHSDDSDSDERNSDG 0.362969263101371 0.0597895426255471 0.123333333333333 0.22 8.17502620376822 16.2996736632047 0.123333333333333 0.22 0.152228994790226 0.0234440497156729 1.66551005625785 3.12368567863361 Q05209 PTPN12 Q05209.S608.p_PTPN12 Q05209_S603sS606sS608s_3_3_603_608 Q05209 Q05209|Q05209-3|Q05209-2 Tyrosine-protein phosphatase non-receptor type 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22314.22517.4 16.06 16.06 3.182 8 3 3 0 962.1661 3605.7356 S603s S606s S608s TMT10 593 (R) TPLSFTNPLHsDDsDsDERNSDGAVTQNK (T) T(0.0)PLS(0.0)FT(0.0)NPLHS(0.99)DDS(0.99)DS(0.99)DERNS(0.0)DGAVT(0.0)QNK K:TMT10,s:Phosphorylated S PTPN12 88960.6 3 19 644.1 254.82 HUMAN 1 8.175 16.2997 LHSGTAKSVTCTYSP-p P04637;S121-p LHSGTAKSVTCTYSP 0.904222813932841 0.0979331140236025 -0.0216666666666667 -0.270333333333333 0.859422161619813 13.3404566854388 -0.0216666666666667 -0.270333333333333 0.820460701172495 0.0463398188209397 -0.238234454998329 -2.57114512360006 P04637 TP53 P04637.S121.p_TP53 P04637_S121s _1_1_121_121 P04637 A0A0U1RQC9|P04637|P04637-4 Cellular tumor antigen p53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16195.16195.3 12.43 12.43 1.272 5 1 1 0 626.9865 1798.9773 S121s TMT10 121 (K) sVTCTYSPALNK (M) S(0.99)VT(0.0)CT(0.0)Y(0.0)S(0.0)PALNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TP53 44223 1 4 1419.1 144.35 HUMAN 1 -0.8594 -13.3405 LHSKRPVSFPETPYT-p O60292;S1135-p LHSKRPVSFPETPYT 0.335067644037044 0.4327885548442 0.192666666666667 -0.112666666666667 8.85868885897846 4.84628785027832 0.192666666666667 -0.112666666666667 0.130056216027694 0.327620610279555 1.78390151001496 -1.07560104734808 O60292 SIPA1L3 O60292.S1135.p_SIPA1L3 O60292_S1135s _1_1_1135_1135 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19963.19963.5 13.56 8.79 2.848 13 1 1 0 919.0582 4511.2945 S1135s TMT10 1132 (K) RPVsFPETPYTVSPAGADRVPPYRQPSGSFSTPGSATYVR (Y) RPVS(0.99)FPET(0.0)PY(0.0)T(0.0)VS(0.0)PAGADRVPPY(0.0)RQPS(0.0)GS(0.0)FS(0.0)T(0.0)PGS(0.0)AT(0.0)Y(0.0)VR s:Phosphorylated S SIPA1L3 195918.6 1 13 144.1 520.25 HUMAN 1 8.8587 -4.8463 LHSVHPESPNLKTSL-p Q9Y217;S561-p LHSVHPESPNLKTSL 0.208898160528089 0.0246170893499141 -0.3 -0.342 13.1274483205184 21.8953846804311 -0.3 -0.342 0.0486693076230346 0.00646340741223555 -2.53405799419452 -4.29353490528744 Q9Y217 MTMR6 Q9Y217.S561.p_MTMR6 Q9Y217_S561s _1_1_561_561 Q9Y217 Q9Y217 Myotubularin-related protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14778.14778.3 16.97 16.97 9.188 2 1 1 0 713.3865 2058.1748 S561s TMT10 552 (K) ELLHSVHPEsPNLK (T) ELLHS(0.0)VHPES(0.99)PNLK K:TMT10,s:Phosphorylated S MTMR6 72822.4 4 1 3686.1 45.39 HUMAN 1 -13.1274 -21.8954 LHTHLPQTPETNFRD-p Q5VZL5;T217-p LHTHLPQTPETNFRD 0.498197615942833 0.646953518289096 0.097 -0.0673333333333333 5.57484301968071 2.57812267229375 0.097 -0.0673333333333333 0.277022917020809 0.552316137757815 1.20843624067215 -0.633257747109778 Q5VZL5 ZMYM4 Q5VZL5.T217.p_ZMYM4 Q5VZL5_T217t _1_1_217_217 Q5VZL5 Q5VZL5|Q5VZL5-4|Q5VZL5-2 Zinc finger MYM-type protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17546.17546.4 20.75 20.75 4.897 4 1 1 0 711.3498 2762.4059 T217t TMT10 202 (K) AANQVEETLHTHLPQtPETNFR (D) AANQVEET(0.0)LHT(0.0)HLPQT(0.99)PET(0.0)NFR t:Phosphorylated T ZMYM4 176265.3 3 4 535.1 278.69 HUMAN 1 5.5748 -2.5781 LHTKQAVSMFLGAVE-p P49419-2;S351-p LHTKQAVSMFLGAVE 0.47019587389486 0.0550088980333294 -0.150666666666667 0.328666666666667 6.04912607600509 16.7820035394243 -0.150666666666667 0.328666666666667 0.248363283256548 0.0209797179880812 -1.29331027554483 3.21740853409749 P49419 ALDH7A1 P49419.2.S351.p_ALDH7A1 P49419-2_S351s _1_1_351_351 P49419-2 A0A1B0GW77|P49419|A0A1B0GTG2|A0A1B0GUA1|P49419-2|A0A1B0GTJ4|A0A1B0GTY9|A0A1B0GV49 Isoform 2 of Alpha-aminoadipic semialdehyde dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32854.32854.3 23.35 23.35 99 1 1 1 0 792.4395 2295.335 S351s TMT10 348 (K) QAVsMFLGAVEEAKK (E) QAVS(1.0)MFLGAVEEAKK K:TMT10,s:Phosphorylated S ALDH7A1 55878.9 3 3 2528.1 79.82 HUMAN 1 -6.0491 16.782 LHTVLEKSPENSPPV-p Q8TF72;S439-p LHTVLEKSPENSPPV 0.268770688456976 0.929245739473786 -0.181 -0.017 10.8211760735607 0.450255844270346 -0.181 -0.017 0.0827717986547137 0.901518027325852 -2.1248095027449 -0.129649104090452 Q8TF72 SHROOM3 Q8TF72.S439.p_SHROOM3 Q8TF72_S439s _1_1_439_439 Q8TF72 Q8TF72 Protein Shroom3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9433.9433.3 12.83 12.83 3.656 2 1 1 0 649.7024 1867.1256 S439s TMT10 439 (K) sPENSPPVKPK (H) S(0.99)PENS(0.0)PPVKPK K:TMT10,s:Phosphorylated S SHROOM3 218451.1 1 36 90.2 622.62 HUMAN 1 -10.8212 -0.4503 LHVGRASTPDWVSEG-p Q8IVT2;T377-p LHVGRASTPDWVSEG 0.53616137253053 0.0516129553619535 -0.089 -0.232333333333333 5.0101427080174 17.1770950188338 -0.089 -0.232333333333333 0.315490095246098 0.0191553679270008 -1.10591649144419 -3.2950534005145 Q8IVT2 MISP Q8IVT2.T377.p_MISP Q8IVT2_T377t _1_1_377_377 Q8IVT2 Q8IVT2 Mitotic interactor and substrate of PLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18396.18396.2 13.92 9.33 1.404 3 1 1 0 1003.4833 1925.9919 T377t TMT10 375 (R) AStPDWVSEGPQPGLR (R) AS(0.0)T(0.99)PDWVS(0.0)EGPQPGLR t:Phosphorylated T MISP 75526.3 9 9 490.1 294.31 HUMAN 1 -5.0101 -17.1771 LHVLVPQSPPTDLPG-p O95402;S535-p LHVLVPQSPPTDLPG 0.890988784685547 0.150416654230421 0.027 -0.184333333333333 0.980145363379591 10.8227402559411 0.027 -0.184333333333333 0.797967977911036 0.0827419924099091 0.268890658994258 -2.12414315277454 O95402 MED26 O95402.S535.p_MED26 O95402_S535s _1_1_535_535 O95402 O95402 Mediator of RNA polymerase II transcription subunit 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25120.25120.4 21.14 21.14 4.67 3 1 1 0 595.0779 2297.3179 S535s TMT10 527 (R) QLHVLVPQsPPTDLPGLTR (E) QLHVLVPQS(0.99)PPT(0.0)DLPGLT(0.0)R s:Phosphorylated S MED26 65901.7 6 10 901.1 203.59 HUMAN 1 0.9801 -10.8227 LHVRNAPSPAATSSI-p Q9H9P8;S440-p LHVRNAPSPAATSSI 0.265301227353781 0.0567979235298513 0.206666666666667 0.311 10.9307387227135 16.5997989280344 0.206666666666667 0.311 0.0807097733515103 0.0218786291644389 2.1439796992405 3.18186855244358 Q9H9P8 L2HGDH Q9H9P8.S440.p_L2HGDH Q9H9P8_S440s _1_1_440_440 Q9H9P8 Q9H9P8 L-2-hydroxyglutarate dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28027.28027.3 12.93 12.93 5.032 5 1 1 0 908.4451 2643.3609 S440s TMT10 437 (R) NAPsPAATSSIAISGMIADEVQQR (F) NAPS(0.99)PAAT(0.0)S(0.0)S(0.0)IAIS(0.0)GMIADEVQQR s:Phosphorylated S L2HGDH 51056.9 1 1 6238.1 12.93 HUMAN 1 10.9307 16.5998 LHYLPFPSP______-p Q8N565;S213-p LHYLPFPSP______ 0.314598608724081 0.439072562467643 -0.139666666666667 -0.074 9.39785992511756 4.76413311848953 -0.140032483848278 -0.074 0.114871953709796 0.333877142677963 -1.8772594847668 -1.06044566759963 Q8N565 MREG Q8N565.S213.p_MREG Q8N565_S213s _1_1_213_213 Q8N565 Q8N565 Melanoregulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28194.28395.2 18.16 18.16 18.161 2 1 1 0 754.873 1428.7725 S213s TMT10 205 (K) ELHYLPFPsP (-) ELHY(0.0)LPFPS(0.99)P s:Phosphorylated S MREG 25383.3 7 2 4108.1 37.53 HUMAN 1 -9.3979 -4.7641 LHYLSHLSPGKSVLI-p O95825;S143-p LHYLSHLSPGKSVLI 0.707346369684743 0.0462398276560136 -0.0746666666666667 0.238 2.82618698883523 17.8645387243921 -0.0746666666666667 0.238 0.52165250967336 0.0163510681090827 -0.68488226304368 3.43211910370892 O95825 CRYZL1 O95825.S143.p_CRYZL1 O95825_S143s _1_1_143_143 O95825 O95825|A6NMA8|A6NHJ8|A6NND8|O95825-2|C9JZK8|F8WF64 Quinone oxidoreductase-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20386.20386.4 19.3 19.3 1.849 5 1 1 0 549.7965 2116.1955 S143s TMT10 132 (R) AYTALHYLSHLsPGK (S) AY(0.0)T(0.0)ALHY(0.0)LS(0.0)HLS(0.99)PGK K:TMT10,s:Phosphorylated S CRYZL1 39095.2 1 1 5437.1 19.3 HUMAN 1 -2.8262 17.8645 LIAEEKLSPEQEGQL-p Q8N201;S307-p LIAEEKLSPEQEGQL 0.474992641256242 0.0614106167463853 0.106333333333333 0.222666666666667 5.95155960135257 16.1368890300466 0.106333333333333 0.222666666666667 0.254006037689756 0.0243394688737542 1.27592951046808 3.09231049164991 Q8N201 INTS1 Q8N201.S307.p_INTS1 Q8N201_S307s _1_1_307_307 Q8N201 Q8N201 Integrator complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27394.27394.4 16.46 16.46 2.232 7 1 1 0 1279.1327 5033.5302 S307s TMT10 275 (R) VAGDLGAGSSPHPSLTEEEDSQTELLIAEEKLsPEQEGQLMPR (Y) VAGDLGAGS(0.0)S(0.0)PHPS(0.0)LT(0.0)EEEDS(0.0)QT(0.0)ELLIAEEKLS(0.99)PEQEGQLMPR K:TMT10,s:Phosphorylated S INTS1 246518.1 1 3 604.1 262.74 HUMAN 1 5.9516 16.1369 LIANSLATAGDGLIE-p P35232;T230-p LIANSLATAGDGLIE 0.256105749737423 0.0256601056912358 -0.209666666666667 -0.46 11.2380266049467 21.640663024802 -0.209666666666667 -0.46 0.0751964502305054 0.00685383582939327 -2.19786320437278 -4.23585302774619 P35232 PHB P35232.T230.p_PHB P35232_T230t _1_1_230_230 P35232 P35232 Prohibitin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.33843.33843.3 13.62 13.62 2.748 2 1 1 0 769.7399 2227.2495 T230t TMT10 220 (K) AAELIANSLAtAGDGLIELR (K) AAELIANS(0.0)LAT(0.99)AGDGLIELR t:Phosphorylated T PHB 29860.6 1 1 4601.1 28.96 HUMAN 1 -11.238 -21.6407 LIAWGRESPAQAPA_-p Q96HY6;S308-p LIAWGRESPAQAPA_ 0.966394874771328 0.737760204081813 0.00666666666666665 -0.131 0.28745607647397 1.82163237692887 0.00666666666666666 -0.131 0.935953757918719 0.657410690823579 0.0841618148424579 -0.4688759218574 Q96HY6 DDRGK1 Q96HY6.S308.p_DDRGK1 Q96HY6_S308s _1_1_308_308 Q96HY6 Q96HY6 DDRGK domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.33886.33886.4 22.3 17.63 2.681 4 1 1 0 737.379 2866.526 S308s TMT10 289 (R) VSIAELAQASNSLIAWGREsPAQAPA (-) VS(0.0)IAELAQAS(0.0)NS(0.0)LIAWGRES(0.99)PAQAPA s:Phosphorylated S DDRGK1 35610.2 2 2 4720.1 27.51 HUMAN 1 0.2875 -1.8216 LIDKKDNTLGRVKDL-p Q9Y4D7;T1661-p LIDKKDNTLGRVKDL 0.308795130567839 0.97190802569562 -0.178333333333333 -0.00399999999999999 9.54002961287724 0.174469150540573 -0.178333333333333 -0.00399999999999998 0.111172414683461 0.960623230690872 -1.90189631595157 -0.0516944677849697 Q9Y4D7 PLXND1 Q9Y4D7.T1661.p_PLXND1 Q9Y4D7_T1661t _1_1_1661_1661 Q9Y4D7 Q9Y4D7|Q9Y4D7-2 Plexin-D1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29130.29130.4 18.2 18.2 1.316 3 1 1 0 749.9186 2916.6795 T1661t TMT10 1644 (K) IPEGASLAMSLIDKKDNtLGR (V) IPEGAS(0.0)LAMS(0.0)LIDKKDNT(0.99)LGR K:TMT10,t:Phosphorylated T PLXND1 215426.4 1 2 4426.1 31.59 HUMAN 1 -9.54 -0.1745 LIDLHSPSEIVKQIT-p P60866-2;S95-p LIDLHSPSEIVKQIT 0.228095422318106 0.491176816369119 0.255 -0.0726666666666667 12.3341545812682 4.12645573729381 0.255 -0.0726666666666667 0.0584230925253485 0.386682418546532 2.39174840380575 -0.941062730788198 P60866 RPS20 P60866.2.S95.p_RPS20 P60866-2_S95s _1_1_95_95 P60866-2 P60866-2|G3XAN0 Isoform 2 of 40S ribosomal protein S20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23758.23758.3 13.9 13.9 2.19 2 1 1 0 630.3566 1809.0886 S95s TMT10 88 (R) LIDLHSPsEIVK (Q) LIDLHS(0.0)PS(0.99)EIVK K:TMT10,s:Phosphorylated S RPS20 16176.5 1 5 2861.1 67.94 HUMAN 1 12.3342 -4.1265 LIDQMNASGPIKEKM-p A0A0B4J1V9;S859-p LIDQMNASGPIKEKM 0.344473681173889 0.0145497038675128 -0.172333333333333 -0.521 8.59646947253373 25.4490212922993 -0.172333333333333 -0.521 0.138150688213796 0.00285166083333878 -1.73850949248188 -5.15182524321901 A0A0B4J1V9 HELLS A0A0B4J1V9.S859.p_HELLS A0A0B4J1V9_S859s _1_1_859_859 A0A0B4J1V9 A0A0B4J1V9|Q9NRZ9|Q9NRZ9-2|Q9NRZ9-3|Q9NRZ9-5|F6XU50|Q9NRZ9-6|A0A087WSW7|Q9NW36 Helicase, lymphoid-specific, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34054.34054.4 10.02 10.02 10.019 3 1 1 0 942.2632 3686.0653 S859s TMT10 837 (K) VISDKDLELLLDRSDLIDQMNAsGPIK (E) VIS(0.0)DKDLELLLDRS(0.0)DLIDQMNAS(0.99)GPIK K:TMT10,s:Phosphorylated S HELLS 103341.1 1 5 2348.1 87.11 HUMAN 1 -8.5965 -25.449 LIDRNQKSDKKPDRE-p O60716-3;S879-p LIDRNQKSDKKPDRE 0.0433393147438643 0.0778670157019491 -0.533 0.329333333333333 30.2209725988618 14.707371458306 -0.533 0.329333333333333 0.000950391930343562 0.0338269509883358 -6.49963770501588 2.82194896310154 O60716 CTNND1 O60716.3.S879.p_CTNND1 O60716-3_S879s _1_1_879_879 O60716-3 O60716|O60716-2|O60716-13|O60716-17|O60716-18|O60716-19|O60716-21|O60716-25|O60716-3|C9JZR2|O60716-5|O60716-9|O60716-10|O60716-11|O60716-26|O60716-27|O60716-29 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11294.11294.5 15.76 10.95 3.34 4 1 1 0 659.1437 3211.7221 S879s TMT10 879 (K) sDKKPDREEIQMSNMGSNTK (S) S(0.99)DKKPDREEIQMS(0.0)NMGS(0.0)NT(0.0)K K:TMT10,s:Phosphorylated S CTNND1 105545.3 5 35 21.1 1014.17 HUMAN 1 -30.221 14.7074 LIDSMANSFVGTRSY-p P36507;S226-p LIDSMANSFVGTRSY 0.730767130605638 0.0597760807966197 0.0833333333333333 0.223666666666667 2.58565200079625 16.3015735739227 0.0833333333333333 0.223666666666667 0.551359421277523 0.0234337958759897 0.634919484441343 3.12405261887775 P36507 MAP2K2 P36507.S226.p_MAP2K2 P36507_S222sS226s_2_2_222_226 P36507 A0A1B0GUL7|P36507|Q02750|Q02750-2|G5E9C7|H3BRW9 Dual specificity mitogen-activated protein kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.35415.35415.3 18.77 18.77 4.266 4 2 2 0 921.7427 2603.2795 S222s S226s TMT10 210 (K) LCDFGVSGQLIDsMANsFVGTR (S) LCDFGVS(0.0)GQLIDS(0.99)MANS(0.99)FVGT(0.0)R C:Carbamidomethylation,s:Phosphorylated S MAP2K2 44708.6 1 7 1640.1 124.72 HUMAN 1 2.5857 16.3016 LIDSMDQSAFAGFSF-p Q05655-2;S689-p LIDSMDQSAFAGFSF 0.500902815636366 0.108074514267251 0.095 0.301666666666667 5.5347814040034 12.7671588691163 0.095 0.301666666666667 0.279590145179187 0.0528791070889373 1.20121979667927 2.46786850924524 Q05655 PRKCD Q05655.2.S689.p_PRKCD Q05655-2_S689s _1_1_689_689 Q05655-2 Q05655-2 Isoform 2 of Protein kinase C delta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35099.35099.3 18.14 18.14 3.479 3 1 1 0 909.4465 2646.3638 S689s TMT10 681 (K) NLIDSMDQsAFAGFSFVNPK (F) NLIDS(0.0)MDQS(0.99)AFAGFS(0.0)FVNPK K:TMT10,s:Phosphorylated S PRKCD 82263.9 14 11 687.1 243.52 HUMAN 1 5.5348 12.7672 LIDSSPLSDNQRMDK-p Q86TI0-2;S1066-p LIDSSPLSDNQRMDK 0.719986950475941 0.584377645792905 -0.062 -0.0853333333333333 2.69352450688474 3.15145381006076 -0.062 -0.0853333333333333 0.537833128118512 0.48401031697409 -0.657445295110985 -0.750901436374115 Q86TI0 TBC1D1 Q86TI0.2.S1066.p_TBC1D1 Q86TI0-2_S1066s _1_1_1066_1066 Q86TI0-2 Q86TI0|Q86TI0-2|A0JNU9 Isoform 2 of TBC1 domain family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.31176.31176.4 15.35 15.35 1.307 5 1 1 0 878.9249 3432.7121 S1066s TMT10 1044 (K) QLQAYEVEYHVLQEELIDSSPLsDNQR (M) QLQAY(0.0)EVEY(0.0)HVLQEELIDS(0.0)S(0.0)PLS(0.99)DNQR s:Phosphorylated S TBC1D1 132688.3 1 14 587.1 264.9 HUMAN 1 -2.6935 -3.1515 LIEDKPRTSHRRSYS-p Q13247;T185-p LIEDKPRTSHRRSYS 0.540250599713126 0.165330866081665 0.096 0.209666666666667 4.93466450233394 10.2791776508938 0.096 0.209666666666667 0.321021078724344 0.0937739553800414 1.09207131080527 2.02941100243959 Q13247 SRSF6 Q13247.T185.p_SRSF6 Q13247_T185t _1_1_185_185 Q13247 Q13247|Q13247-3 Serine/arginine-rich splicing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6309.6309.4 9.72 9.72 1.123 2 1 1 0 473.265 1810.0699 T185t TMT10 178 (R) LIEDKPRtSHR (R) LIEDKPRT(0.99)S(0.0)HR K:TMT10,t:Phosphorylated T SRSF6 39700.2 3 22 743.1 233.79 HUMAN 1 4.9347 10.2792 LIEGKKNSLRVEGDN-p O43491;S614-p LIEGKKNSLRVEGDN 0.170824824892082 0.299278168458254 -0.232666666666667 -0.123666666666667 15.3123858999178 6.91674475303989 -0.232666666666667 -0.123666666666667 0.0294280449006832 0.203388093175883 -2.93724733800178 -1.44603705617589 O43491 EPB41L2 O43491.S614.p_EPB41L2 O43491_S614s _1_1_614_614 O43491 O43491 Band 4.1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12855.12855.4 15.38 15.38 10.092 2 1 1 0 551.0527 2121.2181 S614s TMT10 612 (K) KNsLRVEGDNIYVR (H) KNS(0.99)LRVEGDNIY(0.0)VR K:TMT10,s:Phosphorylated S EPB41L2 113099.5 2 10 469.1 302.69 HUMAN 1 -15.3124 -6.9167 LIEKNLETPLCKNGF-p P54819;T89-p LIEKNLETPLCKNGF 0.174446348459395 0.194186844325725 0.242666666666667 0.163666666666667 15.1022846775008 9.35918594214963 0.242666666666667 0.163666666666667 0.0308867015934889 0.115899458208301 2.89765685542584 1.86985736159161 P54819 AK2 P54819.T89.p_AK2 P54819_T89t _1_1_89_89 P54819 P54819|P54819-2|F8W1A4|P54819-5|P54819-3|P54819-6|F8VY04|F8VZG5 Adenylate kinase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14693.14693.2 8.54 4.69 99 1 1 1 0 756.8984 1432.8234 T89t TMT10 86 (K) NLEtPLCK (N) NLET(1.0)PLCK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T AK2 26705.5 1 1 3699.1 45.01 HUMAN 1 15.1023 9.3592 LIENVSDS_______-p Q15390;S333-p LIENVSDS_______ 0.971689010406699 0.316856278688839 0.006 -0.102333333333333 0.241603625330295 6.59608346487763 0.00600000000000001 -0.102333333333333 0.945887829327842 0.218973547126675 0.0710791959171619 -1.38974550409855 Q15390 MTFR1 Q15390.S333.p_MTFR1 Q15390_S333s _1_1_333_333 Q15390 Q15390|Q15390-2 Mitochondrial fission regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17930.17930.2 11.38 11.38 2.543 2 1 1 0 628.8033 1176.6309 S333s TMT10 325 (K) ALIENVSDs (-) ALIENVS(0.0)DS(0.99) s:Phosphorylated S MTFR1 37171 2 4 2235.1 92.35 HUMAN 1 0.2416 -6.5961 LIEVYLVSGKNVGYA-p Q8IUH3;S425-p LIEVYLVSGKNVGYA 0.494694984011992 0.0117764450042312 -0.138666666666667 0.448666666666667 5.6289475048729 26.9630254410793 -0.138666666666667 0.448666666666667 0.273593168795913 0.00201232191049869 -1.21816979666914 5.55110854335864 Q8IUH3 RBM45 Q8IUH3.S425.p_RBM45 Q8IUH3_S425s _1_1_425_425 Q8IUH3 Q8IUH3|Q8IUH3-3 RNA-binding protein 45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.34793.34793.3 16.26 16.26 4.011 2 1 1 0 659.7016 1897.1199 S425s TMT10 415 (R) FGNLIEVYLVsGK (N) FGNLIEVY(0.0)LVS(0.99)GK K:TMT10,s:Phosphorylated S RBM45 53900.9 1 1 3818.1 42.51 HUMAN 1 -5.6289 26.963 LIFTKGKSPTVVCSL-p Q5VYS8;S960-p LIFTKGKSPTVVCSL 0.560051792492857 0.0985624836406168 -0.0813333333333333 0.191 4.6459665855372 13.3023351055244 -0.0813333333333333 0.191 0.34308627245836 0.0467483718029094 -1.03876088110266 2.5642452980351 Q5VYS8 ZCCHC6 Q5VYS8.S960.p_ZCCHC6 Q5VYS8_S960s _1_1_960_960 Q5VYS8 Q5VYS8|Q5VYS8-6|X6R3Q3 Terminal uridylyltransferase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14526.14526.3 9.44 9.44 1.217 3 1 1 0 701.7145 2023.1647 S960s TMT10 958 (K) GKsPTVVCSLCK (R) GKS(0.99)PT(0.0)VVCS(0.0)LCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZCCHC6 173394.2 1 3 2208.1 93.42 HUMAN 1 -4.646 13.3023 LIGDLPQTPPGAVPD-p Q9H6A9;T199-p LIGDLPQTPPGAVPD 0.133453192058963 0.626249390203376 -0.368 -0.0773333333333333 18.0076530540134 2.76561725855307 -0.368 -0.0773333333333334 0.0158210278341821 0.528978808619243 -3.46381428403894 -0.672300535503897 Q9H6A9 PCNXL3 Q9H6A9.T199.p_PCNXL3 Q9H6A9_T199t _1_1_199_199 Q9H6A9 Q9H6A9|Q9H6A9-2 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37122.37122.5 24.1 24.1 1.17 12 1 1 0 1111.5492 5473.7435 T199t TMT10 192 (K) LIGDLPQtPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLK (G) LIGDLPQT(0.99)PPGAVPDPS(0.0)LAS(0.0)T(0.0)DS(0.0)S(0.0)EPS(0.0)PLAGDGAPWS(0.0)GS(0.0)S(0.0)MADT(0.0)PMS(0.0)PLLK K:TMT10,t:Phosphorylated T PCNX3 224430.8 2 7 168.1 492.45 HUMAN 1 -18.0077 -2.7656 LIGRLQLTTERMREE-p Q93034;T695-p LIGRLQLTTERMREE 0.478558986029447 0.903033210714451 -0.106666666666667 -0.0193333333333333 5.88972486922823 0.617585381361976 -0.106666666666667 -0.0193333333333333 0.257648437521297 0.867444028869739 -1.26489399122022 -0.17498001947588 Q93034 CUL5 Q93034.T695.p_CUL5 Q93034_T695t _1_1_695_695 Q93034 Q93034 Cullin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12367.12367.2 7.79 3.81 1.147 2 1 1 0 585.311 1089.6465 T695t TMT10 692 (R) LQLtTER (M) LQLT(0.99)T(0.0)ER t:Phosphorylated T CUL5 91524.2 1 2 5850.1 15.86 HUMAN 1 -5.8897 -0.6176 LIGRRKLTFDEEAYK-p Q9BUP3;T56-p LIGRRKLTFDEEAYK 0.185360459701097 0.816006237594932 -0.234333333333333 0.0236666666666667 14.3904839844981 1.23550862404457 -0.234333333333333 0.0236666666666667 0.0363874483131546 0.752400607605531 -2.76489829943323 0.331919069072948 Q9BUP3 HTATIP2 Q9BUP3.T56.p_HTATIP2 Q9BUP3_T56t _1_1_56_56 Q9BUP3 Q9BUP3-3|E9PI87|Q9BUP3-2 Oxidoreductase HTATIP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15769.15769.3 10.71 11.69 7.272 2 1 1 0 594.6441 1701.9464 T56t Hydrogen 54 (R) KLtFDEEAYK (N) KLT(0.99)FDEEAY(0.0)K K:TMT10-Lys-Only,t:Phosphorylated T HTATIP2 27276.7 2 2 4232.1 35.02 HUMAN 1 -14.3905 1.2355 LIIAQRRSAGDVARL-p Q9ULE0;S293-p LIIAQRRSAGDVARL 0.238667138359196 0.0592047446951066 0.185666666666667 0.397666666666667 11.9023651816052 16.3557486240463 0.185666666666667 0.397666666666667 0.0645302699412235 0.023143292143707 2.31502879467685 3.13452308598835 Q9ULE0 WWC3 Q9ULE0.S293.p_WWC3 Q9ULE0_S293s _1_1_293_293 Q9ULE0 Q9ULE0 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19476.19476.5 7.72 7.72 99 1 1 1 0 571.0921 2771.4597 S293s TMT10 293 (R) sAGDVARLEEERERLEEELRR (A) S(1.0)AGDVARLEEERERLEEELRR s:Phosphorylated S WWC3 123814.7 1 5 161.1 495.35 HUMAN 1 11.9024 16.3557 LIKDFQGTPTFTYKA-p Q15833-3;T105-p LIKDFQGTPTFTYKA 0.134264480831341 0.053912882138571 -0.326333333333333 -0.350333333333333 17.9124314794244 16.9076922815993 -0.326333333333333 -0.350333333333333 0.0161717437861811 0.0203812479205531 -3.4445647733396 -3.24202240772385 Q15833 STXBP2 Q15833.3.T105.p_STXBP2 Q15833-3_T105t _1_1_105_105 Q15833-3 Q15833-3|Q15833-2|M0R0M7|A0A087WUN8 Isoform 3 of Syntaxin-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20027.20027.3 11.8 11.8 1.149 4 1 1 0 614.9732 1762.9416 T105t TMT10 101 (K) DFQGtPTFTYK (A) DFQGT(0.99)PT(0.0)FT(0.0)Y(0.0)K K:TMT10,t:Phosphorylated T STXBP2 68150.2 1 1 3836.1 42.05 HUMAN 1 -17.9124 -16.9077 LIKHFRKYHLGLHNR-p Q9UHF7-2;Y259-p LIKHFRKYHLGLHNR 0.820904102287946 0.114432941771045 -0.0323333333333333 -0.168666666666667 1.64842567479257 12.4166637423229 -0.0323333333333333 -0.168666666666667 0.684159611408798 0.0573236222938143 -0.429454698381754 -2.40521526812515 Q9UHF7 TRPS1 Q9UHF7.2.Y259.p_TRPS1 Q9UHF7-2_Y259y _1_1_259_259 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3|E5RJ97 Isoform 2 of Zinc finger transcription factor Trps1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.5972.6010.3 19.76 19.76 99 1 1 1 0 440.2256 1238.6956 Y259y TMT10 259 (K) yHLGLHNR (T) Y(1.0)HLGLHNR y:Phosphorylated Y TRPS1 145246 2 1 25.1 68.03 HUMAN 1 -1.6484 -12.4167 LIKKRAPSPLPKMAD-p Q9BSL1;S98-p LIKKRAPSPLPKMAD 0.963118175966314 0.39680100996034 -0.008 -0.113333333333333 0.313688513803674 5.3379725692858 -0.00799999999999999 -0.113333333333333 0.93031741038771 0.292551778786358 -0.0915919867604302 -1.16539922002997 Q9BSL1 UBAC1 Q9BSL1.S98.p_UBAC1 Q9BSL1_S98s _1_1_98_98 Q9BSL1 Q9BSL1 Ubiquitin-associated domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7940.7940.3 8.26 5.83 99 1 1 1 0 587.6968 1681.1092 S98s TMT10 94 (K) KRAPsPLPK (M) KRAPS(1.0)PLPK K:TMT10,s:Phosphorylated S UBAC1 45565.9 12 1 5088.1 23.13 HUMAN 1 -0.3137 -5.338 LIKSEPVSPKNGVLP-p Q3L8U1;S2079-p LIKSEPVSPKNGVLP 0.459152430542572 0.0150452882196435 0.154666666666667 -0.506666666666667 6.23384701170869 25.2184915087675 0.154666666666667 -0.506666666666667 0.238021012803735 0.00300712062337472 1.32611651174159 -5.09289854626793 Q3L8U1 CHD9 Q3L8U1.S2079.p_CHD9 Q3L8U1_S2079s_1_1_2079_2079 Q3L8U1 Q3L8U1|Q3L8U1-3|Q3L8U1-2 Chromodomain-helicase-DNA-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15098.15098.3 15.68 15.68 3.38 3 1 1 0 907.4911 2639.4971 S2079s N2082n TMT10 2075 (K) SEPVsPKnGVLPQATGDQK (S) S(0.0)EPVS(0.99)PKN(1.0)GVLPQAT(0.0)GDQK K:TMT10,s:Phosphorylated S,n:Deamidated CHD9 328184.1 8 6 1062.1 182 HUMAN 1 6.2338 -25.2185 LIKTPTKSFAVYAAT-p Q9H8W4;S108-p LIKTPTKSFAVYAAT 0.107434975252728 0.45802172111315 -0.295 0.0956666666666667 20.402270014177 4.52091406393872 -0.295 0.0956666666666667 0.00911534264898104 0.353108842799164 -3.96581864692724 1.01529344507793 Q9H8W4 PLEKHF2 Q9H8W4.S108.p_PLEKHF2 Q9H8W4_S108s _1_1_108_108 Q9H8W4 Q9H8W4 Pleckstrin homology domain-containing family F member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21296.21296.3 17.79 17.79 7.074 4 1 1 0 599.6481 1716.9573 S108s TMT10 108 (K) sFAVYAATATEK (S) S(0.99)FAVY(0.0)AAT(0.0)AT(0.0)EK K:TMT10,s:Phosphorylated S PLEKHF2 28481.9 1 2 2014.1 102.32 HUMAN 1 -20.4023 4.5209 LILPFQFSSEKQQAL-p Q8TE02-4;S283-p LILPFQFSSEKQQAL 0.357104747728652 0.610631310169385 -0.152666666666667 -0.0506666666666667 8.31570187167105 2.91048134861787 -0.152666666666667 -0.0506666666666667 0.147377034286483 0.511625126623672 -1.68988690049976 -0.702073790848341 Q8TE02 ELP5 Q8TE02.4.S283.p_ELP5 Q8TE02-4_S283s _1_1_283_283 Q8TE02-4 Q8TE02-4 Isoform 4 of Elongator complex protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.33331.33331.3 12.9 11.99 1.19 3 1 1 0 683.6951 1969.1047 S283s TMT10 274 (R) DSLILPFQFsSEK (Q) DS(0.0)LILPFQFS(0.99)S(0.0)EK K:TMT10,s:Phosphorylated S ELP5 36091 2 1 6217.1 13.07 HUMAN 1 -8.3157 -2.9105 LILQGYESGSEEEGE-p Q13523;S142-p LILQGYESGSEEEGE 0.839200328421563 0.00985022343060253 0.0286666666666667 0.673333333333333 1.47364508526611 28.2335236719035 0.0286666666666667 0.673333333333333 0.712254975108093 0.00150192287830272 0.388802243502665 5.90352159269907 Q13523 PRPF4B Q13523.S142.p_PRPF4B Q13523_S142s _1_1_142_142 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23750.23750.3 27.34 23.55 1.103 4 1 1 0 1082.1876 3164.5822 S142s TMT10 129 (K) VQSGMGLILQGYEsGSEEEGEIHEK (A) VQS(0.0)GMGLILQGY(0.0)ES(0.99)GS(0.0)EEEGEIHEK K:TMT10,s:Phosphorylated S PRPF4B 117327.1 13 4 70.1 666.55 HUMAN 1 1.4736 28.2335 LIMKTCFSPNRVIGL-p O00303;S258-p LIMKTCFSPNRVIGL 0.834583820338347 0.174691882956545 -0.0336666666666667 0.137333333333333 1.51472067944783 9.96574421714189 -0.0336666666666667 0.137333333333333 0.705550220712816 0.100791887523806 -0.398433880190347 1.97496408029891 O00303 EIF3F O00303.S258.p_EIF3F O00303_S258s _1_1_258_258 O00303 O00303 Eukaryotic translation initiation factor 3 subunit F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24624.24624.3 11.81 7.6 1.103 5 1 1 0 943.8003 2749.4253 S258s TMT10 255 (K) TCFsPNRVIGLSSDLQQVGGASAR (I) T(0.0)CFS(0.99)PNRVIGLS(0.0)S(0.0)DLQQVGGAS(0.0)AR C:Carbamidomethylation,s:Phosphorylated S EIF3F 37677.3 7 1 4475.1 30.93 HUMAN 1 -1.5147 9.9657 LIMPRPNSVAATSST-p Q9C0D5;S313-p LIMPRPNSVAATSST 0.355077167170123 0.341645468578691 -0.174 0.112666666666667 8.35446562808259 6.177597924123 -0.174 0.112666666666667 0.146067446514807 0.241123871223356 -1.69660196762289 1.31581837736975 Q9C0D5 TANC1 Q9C0D5.S313.p_TANC1 Q9C0D5_S313s _1_1_313_313 Q9C0D5 Q9C0D5|Q9C0D5-2 Protein TANC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27235.27235.5 26.25 22.24 1.965 14 1 1 0 1033.7106 5084.5523 S313s TMT10 288 (K) AESSAGDGPVPYSQGSSSLIMPRPNsVAATSSTKLEDLSYLDGQR (N) AES(0.0)S(0.0)AGDGPVPY(0.0)S(0.0)QGS(0.0)S(0.0)S(0.0)LIMPRPNS(0.99)VAAT(0.0)S(0.0)S(0.0)T(0.0)KLEDLS(0.0)Y(0.0)LDGQR K:TMT10,s:Phosphorylated S TANC1 204383.7 10 9 678.1 246.63 HUMAN 1 -8.3545 6.1776 LINDCHGSVSEASSE-p P50851;S1231-p LINDCHGSVSEASSE 0.791669754962891 0.39268796332652 0.0436666666666667 -0.109 1.95766936970114 5.39599051888854 0.0436666666666667 -0.109 0.637137347317629 0.288669531990497 0.499407077619073 -1.17590193727624 P50851 LRBA P50851.S1231.p_LRBA P50851_S1231s _1_1_1231_1231 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10963.10963.3 19.19 19.19 1.301 4 1 1 0 800.3823 2319.1651 S1231s TMT10 1224 (K) LINDCHGsVSEASSEQK (I) LINDCHGS(0.99)VS(0.0)EAS(0.0)S(0.0)EQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LRBA 321783.7 3 10 74.1 649.16 HUMAN 1 1.9577 -5.396 LINSELGSPSRTDPL-p Q68CP4;S243-p LINSELGSPSRTDPL 0.254568014796455 0.00665295747346147 0.168333333333333 -0.512666666666667 11.3094403747694 31.2780725226181 0.168333333333333 -0.512666666666667 0.0739700585604046 0.00074506257276977 2.21041207663764 -6.81918399838243 Q68CP4 HGSNAT Q68CP4.S243.p_HGSNAT Q68CP4_S243s _1_1_243_243 Q68CP4 Q68CP4|Q68CP4-2 Heparan-alpha-glucosaminide N-acetyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21453.21453.4 20.94 14.18 1.26 6 1 1 0 884.4332 3454.74 S243s TMT10 232 (R) ETDRLINSELGsPSRTDPLDGDVQPATWR (L) ET(0.0)DRLINS(0.0)ELGS(0.99)PS(0.0)RT(0.0)DPLDGDVQPAT(0.0)WR s:Phosphorylated S HGSNAT 74090.8 4 1 4293.1 34.1 HUMAN 1 11.3094 -31.2781 LIPPIPVSPPILAPR-p P48382;S347-p LIPPIPVSPPILAPR 0.215132513141066 0.463862641368469 0.2 0.0886666666666667 12.8563038235597 4.44872337474812 0.2 0.0886666666666667 0.0518047542255054 0.359027456629979 2.48520559875099 1.0018050424089 P48382 RFX5 P48382.S347.p_RFX5 P48382_S347s _1_1_347_347 P48382 P48382|P48382-2 DNA-binding protein RFX5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.35567.35567.3 22.49 18.73 19.804 2 1 1 0 659.3884 1896.1884 S347s TMT10 339 (R) SLIPPIPVsPPILAPR (L) S(0.0)LIPPIPVS(0.99)PPILAPR s:Phosphorylated S RFX5 65721.2 4 3 1365.1 149.8 HUMAN 1 12.8563 4.4487 LIPQPLDSEEDEKME-p Q96MG8;S302-p LIPQPLDSEEDEKME 0.494434979398677 0.0425345947088787 -0.0976666666666667 0.339 5.63253792465335 18.3706875022728 -0.0976666666666667 0.339 0.273367076034879 0.0145522869491736 -1.21881522389538 3.53470843025952 Q96MG8 PCMTD1 Q96MG8.S302.p_PCMTD1 Q96MG8_S302s _1_1_302_302 Q96MG8 Q96MG8|F5H1M8|Q96MG8-2 Protein-L-isoaspartate O-methyltransferase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.33093.33093.3 13.63 13.63 13.629 3 1 1 0 1062.8766 3106.6349 S302s TMT10 285 (R) INTYVFVGNQLIPQPLDsEEDEK (M) INT(0.0)Y(0.0)VFVGNQLIPQPLDS(0.99)EEDEK K:TMT10,s:Phosphorylated S PCMTD1 40959.8 3 1 4830.1 26.19 HUMAN 1 -5.6325 18.3707 LIPSDIESSKSSTRR-p P30414;S467-p LIPSDIESSKSSTRR 0.358160899463675 0.0647364253489138 0.186 0.316 8.28321612968308 15.8216895791427 0.186 0.316 0.148483565302788 0.0261716462847567 1.68425873493042 3.03191437706372 P30414 NKTR P30414.S467.p_NKTR P30414_S467s _1_1_467_467 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25387.25387.3 8.96 8.96 1.354 3 1 1 0 580.6575 1659.9933 S467s TMT10 459 (R) ILIPSDIEsSK (S) ILIPS(0.0)DIES(0.99)S(0.0)K K:TMT10,s:Phosphorylated S NKTR 166700.6 4 12 202.1 449.45 HUMAN 1 8.2832 15.8217 LIQCRKKSVGGDSDT-p Q9UK61;S694-p LIQCRKKSVGGDSDT 0.718648709176867 0.0150452882196435 -0.0766666666666667 0.404666666666667 2.70765646998343 25.2130210221902 -0.0766666666666667 0.404666666666667 0.536085860911023 0.00301091085758878 -0.660381726588461 5.09150602915135 Q9UK61 FAM208A Q9UK61.S694.p_FAM208A Q9UK61_S694s _1_1_694_694 Q9UK61 Q9UK61 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6815.6815.2 13.5 8.93 4.698 3 1 1 0 789.3236 1497.6689 S694s TMT10 694 (K) sVGGDSDTEDMR (S) S(0.99)VGGDS(0.0)DT(0.0)EDMR s:Phosphorylated S FAM208A 190568.5 2 6 246.1 411.17 HUMAN 1 -2.7077 25.213 LIQEQAASPNAEIHI-p Q14807;S543-p LIQEQAASPNAEIHI 0.528611930939456 0.00511592208490401 0.0966666666666667 -0.671666666666667 5.12363295198991 33.3455223607966 0.0966666666666667 -0.671666666666667 0.307352468001707 0.00046285798878777 1.12666696863135 -7.5045423011523 Q14807 KIF22 Q14807.S543.p_KIF22 Q14807_S543s _1_1_543_543 Q14807 Q14807|H3BRB3|Q14807-2 Kinesin-like protein KIF22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31450.31450.4 23.98 23.98 99 1 1 1 0 878.0045 3429.027 S543s TMT10 528 (K) KAVVMPLQLIQEQAAsPNAEIHILK (N) KAVVMPLQLIQEQAAS(1.0)PNAEIHILK K:TMT10,s:Phosphorylated S KIF22 73660.3 6 4 1856.1 110.92 HUMAN 1 5.1236 -33.3455 LIQNCGASTIRLLTS-p P49368;S458-p LIQNCGASTIRLLTS 0.980645193671303 0.567645828539058 -0.006 0.0576666666666667 0.169184286848317 3.31619217927626 -0.00599999999999997 0.0576666666666667 0.961792910071264 0.465994490563962 -0.0501619308388522 0.783817456729091 P49368 CCT3 P49368.S458.p_CCT3 P49368_S458s _1_1_458_458 P49368 P49368|P49368-2|B4DUR8 T-complex protein 1 subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14159.14159.2 14.75 8.01 1.134 3 1 1 0 821.9131 1562.8522 S458s TMT10 450 (R) TLIQNCGAsTIR (L) T(0.0)LIQNCGAS(0.99)T(0.0)IR C:Carbamidomethylation,s:Phosphorylated S CCT3 61103.4 4 6 2149.1 95.76 HUMAN 1 -0.1692 3.3162 LIQSHPESAEDLQEK-p A0A0D9SGF6;S1306-p LIQSHPESAEDLQEK 0.47279619637429 0.0287347459547049 0.102 0.346 5.99415208955488 20.8755056826241 0.102 0.346 0.251527104304481 0.00817427852960837 1.28352175026155 4.06539520290027 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.S1306.p_SPTAN1 A0A0D9SGF6_S1306s _1_1_1306_1306 A0A0D9SGF6 A0A0D9SGF6|Q13813-2|A0A0D9SF54|Q13813-3 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13982.13982.3 20.56 20.56 8.909 2 1 1 0 754.7195 2182.1756 S1306s TMT10 1299 (R) LIQSHPEsAEDLQEK (C) LIQS(0.0)HPES(0.99)AEDLQEK K:TMT10,s:Phosphorylated S SPTAN1 288398.5 2 13 263.1 396.39 HUMAN 1 5.9942 20.8755 LIQTCLNSPDSPPRS-p P11831;S221-p LIQTCLNSPDSPPRS 0.46037124209973 0.796821947011772 0.176 0.0286666666666667 6.21117396254709 1.37827635385487 0.176 0.0286666666666667 0.23926688950093 0.728068706162908 1.32209657555691 0.366208663779408 P11831 SRF P11831.S221.p_SRF P11831_S221sS224s_2_2_221_224 P11831 P11831 Serum response factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17159.17159.4 14.24 14.24 2.38 6 2 2 0 740.3383 2798.394 S221s S224s TMT10 213 (K) ALIQTCLNsPDsPPRSDPTTDQR (M) ALIQT(0.0)CLNS(0.99)PDS(0.99)PPRS(0.0)DPT(0.0)T(0.0)DQR C:Carbamidomethylation,s:Phosphorylated S SRF 51648.8 4 4 1336.1 152.35 HUMAN 1 6.2112 1.3783 LIRGQRKSASSFFKE-p Q8NDD1;S86-p LIRGQRKSASSFFKE 0.127628882978128 0.00273649503124045 -0.315666666666667 -0.835666666666667 18.5363123216593 38.8587492959186 -0.315666666666667 -0.835666666666667 0.0140077624390135 0.000130054406162412 -3.57162952320666 -9.62970503436847 Q8NDD1 C1orf131 Q8NDD1.S86.p_C1orf131 Q8NDD1_S86s _1_1_86_86 Q8NDD1 Q8NDD1|Q8NDD1-2|Q8NDD1-3|Q5TBH9|Q8NDD1-4 Uncharacterized protein C1orf131 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19743.19743.2 9.27 0.44 9.266 3 1 1 0 656.3422 1231.7087 S86s TMT10 86 (K) sASSFFK (E) S(0.99)AS(0.0)S(0.0)FFK K:TMT10,s:Phosphorylated S C1orf131 32822.9 1 2 1643.1 124.3 HUMAN 1 -18.5363 -38.8587 LIRNKFGSADNIAHL-p O75069;S438-p LIRNKFGSADNIAHL 0.659595024833796 0.621803338934451 -0.073 -0.053 3.38805388579587 2.80614728930489 -0.073 -0.053 0.458347230384922 0.52406513879481 -0.798186110194007 -0.680663830283841 O75069 TMCC2 O75069.S438.p_TMCC2 O75069_S438s _1_1_438_438 O75069 O75069|O75069-2|A0A0C4DFR1|O75069-5|O75069-3|O75069-4 Transmembrane and coiled-coil domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20393.20393.5 13.58 13.58 99 1 1 1 0 712.5705 3478.8534 S438s TMT10 434 (R) NKFGsADNIAHLKDPLEDGPPEEAAR (A) NKFGS(1.0)ADNIAHLKDPLEDGPPEEAAR K:TMT10,s:Phosphorylated S TMCC2 77732.5 1 1 4869.1 25.62 HUMAN 1 -3.3881 -2.8061 LIRNKFGSADNIPNL-p O94876;S382-p LIRNKFGSADNIPNL 0.326502819643871 0.236149269239768 -0.19 0.140666666666667 9.10561888159777 8.25448431524448 -0.19 0.140666666666667 0.122867808409158 0.149469151270033 -1.826647691599 1.6787303766497 O94876 TMCC1 O94876.S382.p_TMCC1 O94876_S382s _1_1_382_382 O94876 O94876|E9PC87|O94876-2|Q6N039 Transmembrane and coiled-coil domains protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25598.25598.4 19.53 19.53 4.01 2 1 1 0 822.4175 3206.6784 S382s TMT10 380 (K) FGsADNIPNLKDSLEEGQVDDAGK (A) FGS(0.99)ADNIPNLKDS(0.0)LEEGQVDDAGK K:TMT10,s:Phosphorylated S TMCC1 72481.1 11 2 1921.1 106.93 HUMAN 1 -9.1056 8.2545 LIRPRPTTAPITISS-p Q52LW3;T857-p LIRPRPTTAPITISS 0.992500838833107 0.772249621887867 0.00166666666666667 -0.0406666666666666 0.0700789538805962 1.55259231025807 0.00166666666666667 -0.0406666666666666 0.983993216795839 0.699424383917169 0.0210066342379032 -0.407227530226827 Q52LW3 ARHGAP29 Q52LW3.T857.p_ARHGAP29 Q52LW3_S849sT856tT857t_3_3_849_857 Q52LW3 Q52LW3|F8VWZ8 Rho GTPase-activating protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28611.28611.3 7.15 3.98 6.872 8 3 3 0 1337.3389 3769.0962 S849s T856t T857t N870n TMT10 841 (K) NLGVIFGPsLIRPRPttAPITISSLAEYSnQAR (L) N(0.0)LGVIFGPS(0.99)LIRPRPT(0.99)T(0.99)APIT(0.0)IS(0.0)S(0.0)LAEY(0.0)S(0.0)N(0.99)QAR s:Phosphorylated S,t:Phosphorylated T,n:Deamidated ARHGAP29 143601.5 1 20 517.1 284.75 HUMAN 1 0.0701 -1.5526 LIRRNLASPEGTLAT-p Q8TDJ6-3;S1857-p LIRRNLASPEGTLAT 0.467693467866994 0.0305766553800884 -0.105 -0.275333333333333 6.09425260477366 20.4678714681249 -0.105 -0.275333333333333 0.24579595951898 0.0089786874344294 -1.30133654372948 -3.97625552179993 Q8TDJ6 DMXL2 Q8TDJ6.3.S1857.p_DMXL2 Q8TDJ6-3_S1857s _1_1_1857_1857 Q8TDJ6-3 Q8TDJ6-3|Q8TDJ6-2 Isoform 3 of DmX-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27204.27204.3 19.35 15.8 1.662 4 1 1 0 870.8308 2530.5059 S1857s TMT10 1854 (R) NLAsPEGTLATLGLKTEK (N) NLAS(0.99)PEGT(0.0)LAT(0.0)LGLKT(0.0)EK K:TMT10,s:Phosphorylated S DMXL2 343259.8 6 5 1366.1 149.7 HUMAN 1 -6.0943 -20.4679 LISKNNRSFDTPVKG-p Q8TD84;S1641-p LISKNNRSFDTPVKG 0.812705167874657 0.181259774694445 0.0396666666666667 0.161666666666667 1.73293336837289 9.75562358499907 0.0396666666666667 0.161666666666667 0.670975500823946 0.105788300816301 0.448810890455746 1.93852105283086 Q8TD84 DSCAML1 Q8TD84.S1641.p_DSCAML1 Q8TD84_S1641s _1_1_1641_1641 Q8TD84 Q8TD84|G3V1B5|Q8TD84-2 Down syndrome cell adhesion molecule-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9464.9464.3 7.15 2.64 1.129 2 1 1 0 572.6364 1635.9219 S1641s TMT10 1638 (K) NNRsFDTPVK (G) NNRS(0.99)FDT(0.0)PVK K:TMT10,s:Phosphorylated S DSCAML1 226284.6 1 2 4056.1 38.47 HUMAN 1 1.7329 9.7556 LISNAAVSEEEREAE-p Q8WYB5;S998-p LISNAAVSEEEREAE 0.797289518920796 0.0991966709557079 0.061 0.187 1.89904616689287 13.2607839646551 0.061 0.187 0.64579604847714 0.0471977834714973 0.486327176890662 2.55673015529544 Q8WYB5 KAT6B Q8WYB5.S998.p_KAT6B Q8WYB5_S998s _1_1_998_998 Q8WYB5 Q8WYB5 Histone acetyltransferase KAT6B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26000.26000.4 16.72 9.18 1.109 3 1 1 0 824.6715 3215.6948 S998s TMT10 987 (R) WTPILISNAAVsEEEREAEKEAER (L) WT(0.0)PILIS(0.0)NAAVS(0.99)EEEREAEKEAER K:TMT10,s:Phosphorylated S KAT6B 234283.8 2 3 903.2 203.52 HUMAN 1 1.899 13.2608 LITRSPASPLNNQGI-p Q719H9;S12-p LITRSPASPLNNQGI 0.886998410068536 0.231079432588201 0.021 0.121666666666667 1.01581528371043 8.38054983912599 0.021 0.121666666666667 0.791440866640297 0.145192778443408 0.277840833505758 1.70055382963095 Q719H9 KCTD1 Q719H9.S12.p_KCTD1 Q719H9_S12s _1_1_12_12 Q719H9 Q719H9 BTB/POZ domain-containing protein KCTD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23593.23593.3 21.5 21.5 1.676 4 1 1 0 824.7792 2392.36 S12s TMT10 9 (R) SPAsPLNNQGIPTPAQLTK (S) S(0.0)PAS(0.99)PLNNQGIPT(0.0)PAQLT(0.0)K K:TMT10,s:Phosphorylated S KCTD1 29689.3 8 2 3700.1 44.96 HUMAN 1 1.0158 8.3805 LIVCRSSTPIEMAVK-p Q9NRF8;T220-p LIVCRSSTPIEMAVK 0.862492352854935 0.161322713750725 -0.0266666666666667 0.141666666666667 1.25489099021418 10.4183516343217 -0.0266666666666667 0.141666666666667 0.749050159756483 0.0908165159061499 -0.336647259369832 2.05362557482255 Q9NRF8 CTPS2 Q9NRF8.T220.p_CTPS2 Q9NRF8_T220t _1_1_220_220 Q9NRF8 Q9NRF8 CTP synthase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17480.17480.2 10.77 7.79 1.353 3 1 1 0 800.9235 1520.8758 T220t TMT10 218 (R) SStPIEMAVK (E) S(0.0)S(0.0)T(0.99)PIEMAVK K:TMT10,t:Phosphorylated T CTPS2 66361 2 8 2509.2 80.59 HUMAN 1 -1.2549 10.4184 LIVMLRDTDVNKQDK-p A5A3E0;T164-p LIVMLRDTDVNKQDK 0.191404434921086 0.433315729902323 0.826333333333333 0.425666666666667 14.0175911636986 4.83931447581026 0.826333333333333 0.425666666666667 0.0396497892837885 0.328147086313728 2.69614882890221 1.07431644655019 A5A3E0 POTEF A5A3E0.T164.p_POTEF A5A3E0_T164t_1_1_164_164 A5A3E0 A5A3E0|P0CG38|P0CG39|A0A087X092 POTE ankyrin domain family member F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12753.13171.3 7.02 1.93 99 1 1 1 0 820.0887 2361.3212 M160m T164t N167n Hydrogen 156 (K) DLIVmLRDtDVnKQDK (Q) DLIVM(1.0)LRDT(1.0)DVN(1.0)KQDK K:TMT10-Lys-Only,m:Oxidized methionine,t:Phosphorylated T,n:Deamidated POTEF 123097.1 1 1 1233.99 163.71 HUMAN 1 14.0176 4.8393 LIVRQTQSASSTLQK-p A0A0D9SEY1;S923-p LIVRQTQSASSTLQK 0.961237221279543 0.9657804519961 0.008 -0.00633333333333334 0.329958161748697 0.216654086748867 0.008 -0.00633333333333334 0.926838752142542 0.951337445542436 0.0961807191819573 -0.0639027825436574 A0A0D9SEY1 NotFound A0A0D9SEY1.S923.p_NotFound A0A0D9SEY1_S923s _1_1_923_923 A0A0D9SEY1 O95819-3|A0A0D9SEY1|O95819-5|G5E948|O95819-2|O95819-4|G3XAA2|E7ENQ1|A0A0D9SG62|E7EX83|C9J840 Mitogen-activated protein kinase kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8276.8276.2 12.78 12.78 2.219 5 1 1 0 858.948 1636.927 S923s TMT10 920 (R) QTQsASSTLQK (H) QT(0.0)QS(0.99)AS(0.0)S(0.0)T(0.0)LQK K:TMT10,s:Phosphorylated S MAP4K4 151879.6 3 12 131.2 535.29 HUMAN 1 0.33 -0.2167 LIYARRDSQCIDCFQ-p Q8TBF5-2;S136-p LIYARRDSQCIDCFQ 0.649214474510535 0.824645577177011 0.114 0.0403333333333334 3.51858290037081 1.1735310850784 0.114 0.0403333333333334 0.444776373990173 0.763214989838926 0.823910024173001 0.316825811432238 Q8TBF5 PIGX Q8TBF5.2.S136.p_PIGX Q8TBF5-2_S136s _1_1_136_136 Q8TBF5-2 Q8TBF5-2|H0Y2P9|A0A1X7SBT4|C9JFU3 Isoform 2 of Phosphatidylinositol-glycan biosynthesis class X protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22318.22318.4 20.86 20.86 99 1 1 1 0 655.2965 2538.2002 S136s TMT10 134 (R) RDsQCIDCFQAFLPVHCR (Y) RDS(1.0)QCIDCFQAFLPVHCR C:Carbamidomethylation,s:Phosphorylated S PIGX 31601.1 1 1 5297.1 20.86 HUMAN 1 3.5186 1.1735 LKAAGPASPPEEDPE-p Q96KM6;S409-p LKAAGPASPPEEDPE 0.675922624629322 0.887018872291311 -0.0563333333333334 0.02 3.18846872325607 0.732708983045557 -0.0563333333333334 0.02 0.479902627437242 0.844751753028189 -0.758439227058253 0.20539895596942 Q96KM6 ZNF512B Q96KM6.S409.p_ZNF512B Q96KM6_S409s _1_1_409_409 Q96KM6 Q96KM6 Zinc finger protein 512B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8213.8213.3 13.67 13.67 13.666 2 1 1 0 730.6994 2110.1181 S409s TMT10 404 (K) AAGPAsPPEEDPERTK (H) AAGPAS(0.99)PPEEDPERT(0.0)K K:TMT10,s:Phosphorylated S ZNF512B 98802.8 2 4 2035.1 101.41 HUMAN 1 -3.1885 0.7327 LKADEPSSEESDLEI-p P50502;S76-p LKADEPSSEESDLEI 0.161132785458414 0.104940821363575 -0.523333333333333 0.359 15.8791972218154 12.9333012327274 -0.523333333333333 0.359 0.0258273755653217 0.0508943856964703 -3.04502909336444 2.49769309368906 P50502 ST13 P50502.S76.p_ST13 P50502_S75sS76sS79s_3_3_75_79 P50502 P50502|Q3KNR6 Hsc70-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20520.20520.4 11.67 11.67 99 3 3 3 0 916.1878 3421.8244 S75s S76s S79s TMT10 64 (K) KVEEDLKADEPssEEsDLEIDK (E) KVEEDLKADEPS(1.0)S(1.0)EES(1.0)DLEIDK K:TMT10,s:Phosphorylated S ST13 41502.2 10 8 2700.1 73.52 HUMAN 1 -15.8792 12.9333 LKAKKLTSDEEGEPS-p Q8WVC0;S630-p LKAKKLTSDEEGEPS 0.212264138240011 0.0645436584836467 0.58 -0.269666666666667 12.9893148512283 15.8406596530765 0.58 -0.269666666666667 0.0502421846011493 0.0260575772948463 2.50914169427897 -3.03553622414838 Q8WVC0 LEO1 Q8WVC0.S630.p_LEO1 Q8WVC0_S630s _1_1_630_630 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9296.9767.3 10.14 10.14 1.106 3 1 1 0 715.3751 2064.1428 S630s TMT10 627 (K) KLTsDEEGEPSGK (R) KLT(0.0)S(0.99)DEEGEPS(0.0)GK K:TMT10,s:Phosphorylated S LEO1 75516.9 19 14 514.1 286.88 HUMAN 1 12.9893 -15.8407 LKAKLAKYRAQLLEP-p P55039;Y37-p LKAKLAKYRAQLLEP 0.287925468712825 0.43910939708751 -0.218 0.132666666666667 10.1977914109876 4.76333087711752 -0.218 0.132666666666667 0.0955478367586877 0.33393882312953 -2.01609550335098 1.06029744392091 P55039 DRG2 P55039.Y37.p_DRG2 P55039_Y37y _1_1_37_37 P55039 P55039|A8MZF9|J3QKW7|J3QRI9|J3QKV7|J3QL90 Developmentally-regulated GTP-binding protein 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.14376.14376.3 13.25 4.82 13.255 2 1 1 0 581.6613 1662.9943 Y37y TMT10 37 (K) yRAQLLEPSK (S) Y(0.99)RAQLLEPS(0.0)K K:TMT10,y:Phosphorylated Y DRG2 41145.1 1 1 265.1 13.25 HUMAN 1 -10.1978 4.7633 LKALRSDSYVELSQY-p P52298;S13-p LKALRSDSYVELSQY 0.593161151609383 0.116924948515627 -0.0833333333333333 -0.182333333333333 4.18351546707082 12.2921840490127 -0.0833333333333334 -0.182333333333333 0.381635224957735 0.0589904345105893 -0.95205019016888 -2.38304641943725 P52298 NCBP2 P52298.S13.p_NCBP2 P52298_S13s _1_1_13_13 P52298 P52298|P52298-3|F8WE41 Nuclear cap-binding protein subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15147.15147.3 10.15 10.15 3.663 5 1 1 0 665.9965 1916.0075 S13s TMT10 8 (K) ALRSDsYVELSQYR (D) ALRS(0.0)DS(0.99)Y(0.0)VELS(0.0)QY(0.0)R s:Phosphorylated S NCBP2 18171.9 1 1 4186.1 35.73 HUMAN 1 -4.1835 -12.2922 LKALVLPSPRPYVRI-p P18858;S819-p LKALVLPSPRPYVRI 0.921765246603551 0.0210040685896279 -0.015 -0.331 0.69327815827832 22.9463004551772 -0.015 -0.331 0.852456416684584 0.00507422773160723 -0.195065958020613 -4.53667865032796 P18858 LIG1 P18858.S819.p_LIG1 P18858_S819s _1_1_819_819 P18858 P18858 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19562.19767.3 7.64 7.64 7.643 2 1 1 0 559.6533 1596.9787 S819s TMT10 814 (K) ALVLPsPRPYVR (I) ALVLPS(0.99)PRPY(0.0)VR s:Phosphorylated S LIG1 102361.8 1 16 302.1 376.44 HUMAN 1 -0.6933 -22.9463 LKAMKKCSVPTVRAE-p P58397;S1559-p LKAMKKCSVPTVRAE 0.500594019658091 0.104919995687298 0.129666666666667 0.226666666666667 5.53907867539356 12.9351423109041 0.129666666666667 0.226666666666667 0.279313632223508 0.0508728149216658 1.20199426147338 2.49802405805183 P58397 ADAMTS12 P58397.S1559.p_ADAMTS12 P58397_S1559s _1_1_1559_1559 P58397 P58397|P58397-3 A disintegrin and metalloproteinase with thrombospondin motifs 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7464.7464.2 8.4 8.4 8.4 2 1 1 0 564.2777 1047.5818 S1559s TMT10 1558 (K) CsVPTVR (A) CS(0.99)VPT(0.0)VR C:Carbamidomethylation,s:Phosphorylated S ADAMTS12 182636.2 1 1 6971.1 8.4 HUMAN 1 5.5391 12.9351 LKAQATGSPHTSPTH-p E7EVB6;S524-p LKAQATGSPHTSPTH 0.232221202833204 0.0453960353890061 0.19 0.241 12.1953903053217 17.9711811760886 0.19 0.241 0.0603199495275414 0.0159544516567546 2.36704005904855 3.45361359312854 E7EVB6 DTNB E7EVB6.S524.p_DTNB E7EVB6_S524s _1_1_524_524 E7EVB6 E7EVB6|E9PEY4|O60941-5|O60941-6 Dystrobrevin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6166.6166.4 15.25 12.31 1.164 5 1 1 0 684.8322 2656.3398 S524s TMT10 519 (K) AQATGsPHTSPTHGGGRPMPMPVR (S) AQAT(0.0)GS(0.99)PHT(0.0)S(0.0)PT(0.0)HGGGRPMPMPVR s:Phosphorylated S DTNB 71367.3 1 5 792.3 224.62 HUMAN 1 12.1954 17.9712 LKARFLPSPVVIKKR-p Q13618;S737-p LKARFLPSPVVIKKR 0.796289087702069 0.02473699091478 -0.038 0.352 1.91192379779829 21.8605373217912 -0.038 0.352 0.643883980522903 0.0065154777768381 -0.489207365699036 4.2856155071723 Q13618 CUL3 Q13618.S737.p_CUL3 Q13618_S737s _1_1_737_737 Q13618 Q13618|Q13618-2|Q13618-3|A0A087WTG3 Cullin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25410.25410.3 12.15 12.15 99 1 1 1 0 632.3957 1815.2075 S737s TMT10 734 (R) FLPsPVVIKK (R) FLPS(1.0)PVVIKK K:TMT10,s:Phosphorylated S CUL3 89499.2 5 5 2686.1 73.98 HUMAN 1 -1.9119 21.8605 LKASLENSLREVEAR-p P05783;S323-p LKASLENSLREVEAR 0.879897888357523 0.498611464055483 -0.031 0.082 1.09273937381256 4.04379869610092 -0.031 0.082 0.777545948234787 0.394112428182853 -0.296982032861293 0.925334560787794 P05783 KRT18 P05783.S323.p_KRT18 P05783_S323s _1_1_323_323 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11900.11900.3 15.04 11.02 5.186 2 1 1 0 594.97 1702.9285 S323s TMT10 318 (K) ASLENsLREVEAR (Y) AS(0.0)LENS(0.99)LREVEAR s:Phosphorylated S KRT18 48057 3 24 89.1 623.62 HUMAN 1 -1.0927 4.0438 LKATAPASPRLGQSQ-p Q5T0Z8;S373-p LKATAPASPRLGQSQ 0.771201348350663 0.00808186089366943 0.061 -0.501333333333333 2.16333890197147 29.8055485213128 0.061 -0.501333333333333 0.607667640328236 0.0010457915968652 0.544678278004288 -6.36317868236349 Q5T0Z8 C6orf132 Q5T0Z8.S373.p_C6orf132 Q5T0Z8_S373s _1_1_373_373 Q5T0Z8 Q5T0Z8 Uncharacterized protein C6orf132 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4501.4501.2 10.34 6.34 4.343 2 1 1 0 540.2765 999.5785 S373s TMT10 368 (K) ATAPAsPR (L) AT(0.0)APAS(0.99)PR s:Phosphorylated S C6orf132 124488.2 1 5 336.1 355.09 HUMAN 1 2.1633 -29.8055 LKATVTPSPVKGKGK-p Q9H1E3;S181-p LKATVTPSPVKGKGK 0.80199546725685 0.00862705880919448 -0.0363333333333333 -0.764333333333333 1.84406248260302 29.2886670846996 -0.0363333333333333 -0.764333333333334 0.654024099837706 0.00117796745403334 -0.473984771063608 -6.20904892400807 Q9H1E3 NUCKS1 Q9H1E3.S181.p_NUCKS1 Q9H1E3_S181s _1_1_181_181 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15443.15443.3 14.89 14.89 1.644 3 1 1 0 636.7228 1828.1875 S181s TMT10 174 (R) LKATVTPsPVK (G) LKAT(0.0)VT(0.0)PS(0.99)PVK K:TMT10,s:Phosphorylated S NUCKS1 27295.9 28 13 48.1 767.83 HUMAN 1 -1.8441 -29.2887 LKCGENTSPVLDAVL-p Q9BYW2;S905-p LKCGENTSPVLDAVL 0.922387118101847 0.0271318418717441 -0.016 -0.3 0.68722376175725 21.2554642284732 -0.016 -0.301724566713309 0.853645634724667 0.00748951296913225 -0.193470255092993 -4.14952007416043 Q9BYW2 SETD2 Q9BYW2.S905.p_SETD2 Q9BYW2_S905s _1_1_905_905 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25415.25415.2 9.21 9.21 1.121 2 1 1 0 1021.0284 1961.0778 S905s TMT10 900 (K) CGENTsPVLDAVLK (S) CGENT(0.0)S(0.99)PVLDAVLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SETD2 290615.4 3 16 58.1 711.11 HUMAN 1 -0.6872 -21.2555 LKDDGEDSEMQVEAP-p Q9P2I0;S660-p LKDDGEDSEMQVEAP 0.16550315241392 0.857205637435718 0.444666666666667 -0.0513333333333333 15.6320121946077 0.943693393419842 0.444666666666667 -0.0513333333333333 0.0273400170165813 0.804693810130987 2.99784741816609 -0.259668868635165 Q9P2I0 CPSF2 Q9P2I0.S660.p_CPSF2 Q9P2I0_S660s _1_1_660_660 Q9P2I0 Q9P2I0 Cleavage and polyadenylation specificity factor subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24357.24357.5 28.73 28.73 8.174 6 1 1 0 1032.5289 5078.6385 S660s TMT10 639 (R) VSKVDTGVILEEGELKDDGEDsEMQVEAPSDSSVIAQQK (A) VS(0.0)KVDT(0.0)GVILEEGELKDDGEDS(0.99)EMQVEAPS(0.0)DS(0.0)S(0.0)VIAQQK K:TMT10,s:Phosphorylated S CPSF2 89341 1 1 3554.1 48.31 HUMAN 1 15.632 -0.9437 LKDGHRISLPSDFQH-p A0A1W2PKR9;S514-p LKDGHRISLPSDFQH 0.44074595414421 0.745334080697118 -0.166333333333333 -0.0346666666666666 6.55398341661928 1.76188722118951 -0.166333333333333 -0.0346666666666667 0.221106575531067 0.666517072122006 -1.38269152075304 -0.455349185013765 A0A1W2PKR9 NotFound A0A1W2PKR9.S514.p_NotFound A0A1W2PKR9_S514s _1_1_514_514 A0A1W2PKR9 Q5TCX8|A0A1W2PKR9|Q5TCX8-2 Mitogen-activated protein kinase kinase kinase 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12302.12302.5 11.67 11 2.832 2 1 1 0 435.8286 2095.1449 S514s TMT10 509 (K) DGHRIsLPSDFQHK (I) DGHRIS(0.99)LPS(0.0)DFQHK K:TMT10,s:Phosphorylated S MAP3K21 115095.7 3 1 2799.1 70.16 HUMAN 1 -6.554 -1.7619 LKDHQNGSMAAVNGH-p Q9NYP7-2;S300-p LKDHQNGSMAAVNGH 0.850252688548194 0.031937845110908 0.0326666666666667 -0.291 1.36378481636151 20.1958040832866 0.0326666666666667 -0.291 0.730502183446447 0.00955915693693663 0.36279526783536 -3.91738704836194 Q9NYP7 ELOVL5 Q9NYP7.2.S300.p_ELOVL5 Q9NYP7-2_S300s_1_1_300_300 Q9NYP7-2 Q9NYP7-2 Isoform 2 of Elongation of very long chain fatty acids protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13171.13171.4 15.65 15.65 3.801 4 1 1 0 865.9224 3379.6966 S300s N305n TMT10 295 (K) DHQNGsMAAVnGHTNSFSPLENNVKPR (K) DHQN(0.0)GS(0.99)MAAVN(0.99)GHT(0.0)N(0.0)S(0.0)FS(0.0)PLEN(0.0)N(0.0)VKPR K:TMT10,s:Phosphorylated S,n:Deamidated ELOVL5 38858.5 1 1 5181.1 22.1 HUMAN 1 1.3638 -20.1958 LKDKLDETGNSLKVI-p P11388-2;T282-p LKDKLDETGNSLKVI 0.96030951217984 0.0104679227872567 -0.01 -0.46 0.339590292598358 27.7767712587959 -0.01 -0.46 0.924785412798686 0.00166848718024955 -0.0988904167554539 -5.7749299895679 P11388 TOP2A P11388.2.T282.p_TOP2A P11388-2_T282t _1_1_282_282 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12190.12190.3 12.33 12.33 2.296 2 1 1 0 663.0282 1907.1053 T282t TMT10 277 (K) DKLDEtGNSLK (V) DKLDET(0.99)GNS(0.0)LK K:TMT10,t:Phosphorylated T TOP2A 178239.3 1 3 71.2 658.36 HUMAN 1 -0.3396 -27.7768 LKDKMEGSDFESSGG-p A0A1B0GW41;S120-p LKDKMEGSDFESSGG 0.412971567200353 0.199446593861233 -0.234666666666667 0.126666666666667 7.08613027655463 9.21201130650554 -0.234666666666667 0.126666666666667 0.19560816201072 0.119894391912185 -1.47608160080965 1.84438877671634 A0A1B0GW41 NotFound A0A1B0GW41.S120.p_NotFound A0A1B0GW41_S120s _1_1_120_120 A0A1B0GW41 A0A1B0GW41|Q8WYH8|Q8WYH8-2|E9PEN0 Inhibitor of growth protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9263.9263.2 14.87 9.23 2.918 3 1 1 0 1020.4591 1959.9482 S120s TMT10 115 (K) DKMEGsDFESSGGR (G) DKMEGS(0.99)DFES(0.0)S(0.0)GGR K:TMT10,s:Phosphorylated S ING5 28803.1 7 2 2243.1 92 HUMAN 1 -7.0861 9.212 LKDLFDYSPPLHKNL-p Q9NYF8;S512-p LKDLFDYSPPLHKNL 0.260386657049657 0.6152291492281 0.169 0.0613333333333334 11.0853109642508 2.86605497432882 0.169 0.0613333333333334 0.0778877043274577 0.516885682492691 2.17106186956279 0.692977924072323 Q9NYF8 BCLAF1 Q9NYF8.S512.p_BCLAF1 Q9NYF8_S512s _1_1_512_512 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|A0A1W2PQ43 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25819.26081.3 18.83 18.83 4.977 2 1 1 0 780.7696 2260.3309 S512s TMT10 505 (K) LKDLFDYsPPLHK (N) LKDLFDY(0.0)S(0.99)PPLHK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 58 27 10.1 1293.04 HUMAN 1 11.0853 2.8661 LKDMSPLSETEMALG-p E7EVA0;S527-p LKDMSPLSETEMALG 0.477957924431391 0.017343029390308 -0.182 0.357666666666667 5.89949049063673 24.2946632312968 -0.182 0.357666666666667 0.257069735637824 0.00371992065744091 -1.26663790481448 4.861480526418 E7EVA0 NotFound E7EVA0.S527.p_NotFound E7EVA0_S527s _1_1_527_527 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28168.28168.2 13.34 13.34 1.23 3 1 1 0 1023.9989 1967.023 S527s TMT10 522 (K) DMSPLsETEMALGK (D) DMS(0.0)PLS(0.99)ET(0.0)EMALGK K:TMT10,s:Phosphorylated S MAP4 246695.2 5 13 38.1 865.62 HUMAN 1 -5.8995 24.2947 LKDSLAKSPSVKNDP-p Q8IWJ2;S935-p LKDSLAKSPSVKNDP 0.091146044347512 0.00595004777315755 -0.469 -0.632333333333333 22.1341772250666 32.1461512359552 -0.469 -0.632333333333333 0.0061176169079784 0.000610077314769758 -4.35267982646308 -7.10029163449977 Q8IWJ2 GCC2 Q8IWJ2.S935.p_GCC2 Q8IWJ2_S935s _1_1_935_935 Q8IWJ2 Q8IWJ2 GRIP and coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16709.16709.3 11.92 10.02 2.449 4 1 1 0 709.0686 2045.221 S935s TMT10 935 (K) sPSVKNDPLSSVK (E) S(0.99)PS(0.0)VKNDPLS(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S GCC2 196990.2 2 91 9.3 1298.62 HUMAN 1 -22.1342 -32.1462 LKEAEEESSGGEEED-p P55010;S389-p LKEAEEESSGGEEED 0.454180425050792 0.399752078749365 -0.116333333333333 0.104666666666667 6.32245429623429 5.29624289980719 -0.116333333333333 0.104666666666667 0.233213974495239 0.295376343509717 -1.34180926879477 1.15783370988297 P55010 EIF5 P55010.S389.p_EIF5 P55010_S389sS390s_2_2_389_390 P55010 P55010 Eukaryotic translation initiation factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21768.21768.2 18.5 18.5 13.454 4 2 2 0 1660.6809 3160.4218 S389s S390s TMT10 384 (K) EAEEEssGGEEEDEDENIEVVYSK (A) EAEEES(0.99)S(0.99)GGEEEDEDENIEVVY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S EIF5 49678.3 35 10 980.1 192.67 HUMAN 1 -6.3225 5.2962 LKEASRSSPVEFECI-p O75131;S243-p LKEASRSSPVEFECI 0.247426450159145 0.0196754678220892 0.170666666666667 0.368666666666667 11.586194638536 23.4186762467404 0.170666666666667 0.368666666666667 0.0694033663666277 0.00455126764129275 2.25914467099578 4.64877587724626 O75131 CPNE3 O75131.S243.p_CPNE3 O75131_S243s _1_1_243_243 O75131 O75131 Copine-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13481.13481.4 14.36 8.08 1.406 3 1 1 0 695.1105 2697.4485 S243s TMT10 238 (K) EASRSsPVEFECINEKK (R) EAS(0.0)RS(0.0)S(0.99)PVEFECINEKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CPNE3 60985.3 13 5 1209.1 166.69 HUMAN 1 11.5862 23.4187 LKEDVSISPGEFEHN-p Q99550;S267-p LKEDVSISPGEFEHN 0.281648949875624 0.0061233383809166 -0.269333333333333 0.559666666666667 10.4043724271566 31.8961848421649 -0.269333333333333 0.559666666666667 0.0911093099339674 0.000646221667758611 -2.05205977371442 7.01837993014837 Q99550 MPHOSPH9 Q99550.S267.p_MPHOSPH9 Q99550_S267s _1_1_267_267 Q99550 Q99550|Q99550-2|A0A0A0MTP3 M-phase phosphoprotein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27266.27266.3 21.53 21.53 2.456 2 1 1 0 896.0996 2606.3139 S267s TMT10 262 (K) EDVSIsPGEFEHNFLGENK (V) EDVS(0.0)IS(0.99)PGEFEHNFLGENK K:TMT10,s:Phosphorylated S MPHOSPH9 133763.4 2 1 1356.1 150.46 HUMAN 1 -10.4044 31.8962 LKEEPQSSEEESMSS-p Q3L8U1;S2059-p LKEEPQSSEEESMSS 0.428733505282635 0.0115841932008813 -0.118333333333333 -0.451333333333333 6.77346612936051 27.0845085403254 -0.118333333333333 -0.451333333333333 0.210210007188136 0.00195681219369834 -1.42129843384268 -5.58410175906954 Q3L8U1 CHD9 Q3L8U1.S2059.p_CHD9 Q3L8U1_S2058sS2059s_2_2_2058_2059 Q3L8U1 Q3L8U1 Chromodomain-helicase-DNA-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13484.13484.4 11.1 11.1 2.375 7 2 2 0 897.4275 3426.7513 S2058s S2059s TMT10 2047 (K) VKSENLKEEPQssEEESMSSVETR (T) VKS(0.0)ENLKEEPQS(0.99)S(0.99)EEES(0.0)MS(0.0)S(0.0)VET(0.0)R K:TMT10,s:Phosphorylated S CHD9 328184.1 1 9 1062.1 182 HUMAN 1 -6.7735 -27.0845 LKEFDGKSLVSVTKE-p P08238;S532-p LKEFDGKSLVSVTKE 0.146521364079214 0.094465627281426 -0.685333333333333 -0.199666666666667 16.9861807940459 13.5523684676395 -0.685333333333333 -0.199666666666667 0.0200162133102555 0.0441329698223517 -3.25991348661936 -2.60958830940203 P08238 HSP90AB1 P08238.S532.p_HSP90AB1 P08238_S532s _1_1_532_532 P08238 P08238 Heat shock protein HSP 90-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20660.20660.3 13.74 13.74 2.33 3 1 1 0 693.0585 1997.1886 S532s TMT10 527 (K) EFDGKsLVSVTK (E) EFDGKS(0.99)LVS(0.0)VT(0.0)K K:TMT10,s:Phosphorylated S HSP90AB1 83605 2 36 43.2 810.87 HUMAN 1 -16.9862 -13.5524 LKEKTDDTSGEDNDE-p Q9Y618;T553-p LKEKTDDTSGEDNDE 0.131504655206906 0.0291724794773081 0.267333333333333 -0.306666666666667 18.2072007360363 20.777953360566 0.267333333333333 -0.306666666666667 0.015110537966415 0.00835996894089407 3.50432072218759 -4.04395914164066 Q9Y618 NCOR2 Q9Y618.T553.p_NCOR2 Q9Y618_T553tS554s_2_2_553_554 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11242.11242.3 12.64 12.64 2.719 4 2 2 0 1082.1831 3084.5991 T553t S554s TMT10 548 (K) EKTDDtsGEDNDEKEAVASK (G) EKT(0.0)DDT(0.99)S(0.99)GEDNDEKEAVAS(0.0)K K:TMT10,t:Phosphorylated T,s:Phosphorylated S NCOR2 275540.8 4 43 16.1 1053.89 HUMAN 1 18.2072 -20.778 LKELEELSLEAQGIK-p O60841;S66-p LKELEELSLEAQGIK 0.221335460159546 0.293408270410766 -0.323666666666667 0.171666666666667 12.6151401262404 7.0289131208649 -0.323666666666667 0.171666666666667 0.0547628431303537 0.198202299109724 -2.44194296021744 1.4656667503346 O60841 EIF5B O60841.S66.p_EIF5B O60841_S66s _1_1_66_66 O60841 O60841|A0A087WUT6 Eukaryotic translation initiation factor 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24142.24142.3 13.98 11.5 99 1 1 1 0 666.3589 1917.0945 S66s TMT10 61 (K) ELEELsLEAQGIK (A) ELEELS(1.0)LEAQGIK K:TMT10,s:Phosphorylated S EIF5B 139280.8 2 2 113.1 571.22 HUMAN 1 -12.6151 7.0289 LKELGDDSLPAEGYM-p Q12955;S896-p LKELGDDSLPAEGYM 0.198278297009499 0.0218892014957538 -0.234666666666667 -0.339 13.6994019741045 22.681840716243 -0.234666666666667 -0.339 0.0426638263080943 0.00539282004473188 -2.63789210174921 -4.4746929277774 Q12955 ANK3 Q12955.S896.p_ANK3 Q12955_S896s _1_1_896_896 Q12955 Q12955|Q12955-4|Q12955-5|Q12955-7|Q12955-6|D6RF31|A0A087X0L3 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28993.28993.3 18.84 13.94 7.45 3 1 1 0 798.7015 2314.1223 S896s TMT10 891 (K) ELGDDsLPAEGYMGFSLGAR (S) ELGDDS(0.99)LPAEGY(0.0)MGFS(0.0)LGAR s:Phosphorylated S ANK3 482683.6 2 9 135.1 530.51 HUMAN 1 -13.6994 -22.6818 LKESEQESEEEILAQ-p Q9BW71;S227-p LKESEQESEEEILAQ 0.101218422745456 0.296759492203043 0.359333333333333 -0.293666666666667 21.0375380915389 6.96436654843688 0.359333333333333 -0.293666666666667 0.00787492073051707 0.20117005986497 4.10524042000821 -1.45437455251609 Q9BW71 HIRIP3 Q9BW71.S227.p_HIRIP3 Q9BW71_S227s _1_1_227_227 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15208.15208.2 21.21 21.21 4.889 2 1 1 0 1272.6579 2464.3386 S227s TMT10 222 (K) ESEQEsEEEILAQKK (E) ES(0.0)EQES(0.99)EEEILAQKK K:TMT10,s:Phosphorylated S HIRIP3 62298.3 12 10 178.1 481.23 HUMAN 1 21.0375 -6.9644 LKETERASPIKMDLA-p E7EVA0;S375-p LKETERASPIKMDLA 0.325306077824017 0.00316236615140963 0.208 -0.669333333333333 9.13366805306888 37.5290972428149 0.208 -0.671358392731537 0.122076816330714 0.000176640496075163 1.83150403872905 -9.0736335684478 E7EVA0 NotFound E7EVA0.S375.p_NotFound E7EVA0_S375s _1_1_375_375 E7EVA0 E7EVA0|P27816 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24726.24726.5 15.97 9.03 1.584 5 1 1 0 829.8804 4065.3981 S375s TMT10 350 (K) NVVLPTETEVAPAKDVTLLKETERAsPIK (M) NVVLPT(0.0)ET(0.0)EVAPAKDVT(0.0)LLKET(0.0)ERAS(0.99)PIK K:TMT10,s:Phosphorylated S MAP4 246695.2 27 8 38.1 865.62 HUMAN 1 9.1337 -37.5291 LKFARKHSMLFIEAS-p Q9NP72-2;S173-p LKFARKHSMLFIEAS 0.205048524137417 0.0282466576673109 -0.218 -0.342333333333333 13.3094594124513 20.9884603269327 -0.218 -0.342333333333333 0.0466717471301462 0.00796441657118731 -2.56698226629136 -4.0902982461267 Q9NP72 RAB18 Q9NP72.2.S173.p_RAB18 Q9NP72-2_S173s _1_1_173_173 Q9NP72-2 Q9NP72-2|A0A087X163|Q5W0J0|Q9NP72-3 Isoform 2 of Ras-related protein Rab-18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16461.16461.2 15.98 15.98 7.806 2 1 1 0 1065.0924 2049.2134 S173s TMT10 171 (R) KHsMLFIEASAK (T) KHS(0.99)MLFIEAS(0.0)AK K:TMT10,s:Phosphorylated S RAB18 26694.9 6 4 3683.1 45.44 HUMAN 1 -13.3095 -20.9885 LKFYDSNTVKQKYLS-p Q13177;T134-p LKFYDSNTVKQKYLS 0.0482466396076474 0.110204808911674 -0.702666666666667 0.323 29.206853144718 12.649372577485 -0.702666666666667 0.323 0.00120036876356002 0.0543328820196682 -6.19438984492302 2.44677413264379 Q13177 PAK2 Q13177.T134.p_PAK2 Q13177_T134t _1_1_134_134 Q13177 Q13177 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14705.15450.2 12.08 12.08 2.149 3 1 1 0 756.3804 1431.7884 T134t TMT10 129 (K) FYDSNtVK (Q) FY(0.0)DS(0.0)NT(0.99)VK K:TMT10,t:Phosphorylated T PAK2 58326.8 1 22 272.1 393.22 HUMAN 1 -29.2069 12.6494 LKGAWKNSVEEWTTE-p Q5T6F2;S254-p LKGAWKNSVEEWTTE 0.248491641321601 0.309804184181098 -0.180666666666667 -0.128 11.5495647659343 6.72502578007636 -0.180666666666667 -0.128 0.0699912135125186 0.212567772698246 -2.25268511079866 -1.41241429926845 Q5T6F2 UBAP2 Q5T6F2.S254.p_UBAP2 Q5T6F2_S254s _1_1_254_254 Q5T6F2 Q5T6F2 Ubiquitin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28258.28258.5 16.05 12.81 3.894 6 1 1 0 702.5424 3428.7101 S254s TMT10 249 (K) GAWKNsVEEWTTEDWTEDLSETK (V) GAWKNS(0.99)VEEWT(0.0)T(0.0)EDWT(0.0)EDLS(0.0)ET(0.0)K K:TMT10,s:Phosphorylated S UBAP2 117683.9 3 3 2109.1 97.32 HUMAN 1 -11.5496 -6.725 LKGDIKVSAPGVQGD-p Q09666;S521-p LKGDIKVSAPGVQGD 0.345614283878969 0.0480112747286568 -0.268333333333333 0.341666666666667 8.57400975117671 17.6398597075745 -0.268333333333333 0.341666666666667 0.138866990892781 0.0172192419830856 -1.73462102124077 3.38703984240236 Q09666 AHNAK Q09666.S521.p_AHNAK Q09666_S521s _1_1_521_521 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17230.17230.4 11.37 11.37 99 1 1 1 0 677.655 2627.6266 S521s TMT10 514 (K) LKGDIKVsAPGVQGDVK (G) LKGDIKVS(1.0)APGVQGDVK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 27 1.1 4313.36 HUMAN 1 -8.574 17.6399 LKGDLDASVPSMKVH-p Q09666;S5318-p LKGDLDASVPSMKVH 0.0926681628012438 0.669069046411955 -0.513 0.071 21.9844362952958 2.38597161224086 -0.513 0.071 0.00633222547273579 0.577301703181821 -4.31837118433977 0.592603757557372 Q09666 AHNAK Q09666.S5318.p_AHNAK Q09666_S5318s _1_1_5318_5318 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19931.19931.3 16.35 16.35 1.927 3 1 1 0 790.4299 2289.3091 S5318s TMT10 5308 (K) GPSLKGDLDAsVPSMK (V) GPS(0.0)LKGDLDAS(0.99)VPS(0.0)MK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 130 1.1 4313.36 HUMAN 1 -21.9844 2.386 LKGGKRLSGSSEDEE-p Q9BW71;S330-p LKGGKRLSGSSEDEE 0.796289087702069 0.00954031346652563 0.054 0.5735 1.91089916437601 28.5008918765728 0.054 0.5735 0.644035910355573 0.00141224749263106 0.488978342399153 5.97980909956883 Q9BW71 HIRIP3 Q9BW71.S330.p_HIRIP3 Q9BW71_S330sS332s_2_2_330_332 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9150.9150.4 11.76 11.76 1.272 5 2 2 0 732.3477 2766.4361 S330s S332s TMT10 328 (K) RLsGsSEDEEDSGKGEPTAK (G) RLS(0.99)GS(0.99)S(0.0)EDEEDS(0.0)GKGEPT(0.0)AK K:TMT10,s:Phosphorylated S HIRIP3 62298.3 3 26 178.1 481.23 HUMAN 2 1.9109 28.5009 LKGLDIESYDSLERP-p Q9H792;S1214-p LKGLDIESYDSLERP 0.0869556107735123 0.148943828729514 -0.346 -0.189666666666667 22.6136643025189 10.8849029692723 -0.346 -0.189666666666667 0.00547814558551505 0.0815661010550449 -4.46368725205219 -2.13500631834416 Q9H792 PEAK1 Q9H792.S1214.p_PEAK1 Q9H792_S1214sS1217s_2_2_1214_1217 Q9H792 Q9H792 Pseudopodium-enriched atypical kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22335.22335.4 9.55 9.55 1.733 3 2 2 0 628.0703 2349.3178 S1214s S1217s TMT10 1209 (K) GLDIEsYDsLERPLRK (E) GLDIES(0.99)Y(0.0)DS(0.99)LERPLRK K:TMT10,s:Phosphorylated S PEAK1 195156.9 1 17 583.1 265.81 HUMAN 1 -22.6137 -10.8849 LKHTGPNSPDTANDG-p G8JLB6;S104-p LKHTGPNSPDTANDG 0.703545989174049 0.162483763712056 0.0553333333333333 0.150666666666667 2.87060154889314 10.3753436553316 0.0553333333333333 0.150666666666667 0.516344844489935 0.0917203354616298 0.694005195628551 2.04613996043174 G8JLB6 HNRNPH1 G8JLB6.S104.p_HNRNPH1 G8JLB6_S104s _1_1_104_104 G8JLB6 G8JLB6|P31943|P55795|E9PCY7|D6RIH9 Heterogeneous nuclear ribonucleoprotein H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5977.5977.2 18.47 18.47 2.806 3 1 1 0 882.8706 1684.7674 S104s Hydrogen 99 (K) HTGPNsPDTANDGFVR (L) HT(0.0)GPNS(0.99)PDT(0.0)ANDGFVR s:Phosphorylated S HNRNPH1 51514.2 14 4 990.2 191.56 HUMAN 1 2.8706 10.3753 LKHVEEFSPRAVYTS-p Q14566;S413-p LKHVEEFSPRAVYTS 0.812891412800423 0.954296372240864 -0.0413333333333333 -0.013 1.73109919144328 0.289508789090413 -0.0413333333333334 -0.013 0.671258937006765 0.935511479649831 -0.448392766021608 -0.0847368606261012 Q14566 MCM6 Q14566.S413.p_MCM6 Q14566_S413s _1_1_413_413 Q14566 Q14566 DNA replication licensing factor MCM6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7341.7341.3 10.57 10.57 99 1 1 1 0 437.2097 1229.6476 S413s TMT10 408 (K) HVEEFsPR (A) HVEEFS(1.0)PR s:Phosphorylated S MCM6 93857.5 1 4 1039.1 185.36 HUMAN 1 -1.7311 -0.2895 LKIKNMGSWASLVQK-p O60885;S1201-p LKIKNMGSWASLVQK 0.602239550710979 0.147144465082663 -0.0706666666666667 -0.165333333333333 4.06756125884184 10.9577618037969 -0.0706666666666667 -0.165333333333333 0.39196191797064 0.0802091325658715 -0.930022156251403 -2.14774719157268 O60885 BRD4 O60885.S1201.p_BRD4 O60885_S1201s _1_1_1201_1201 O60885 O60885 Bromodomain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26255.26255.3 9.57 8.76 1.714 2 1 1 0 586.9729 1678.9351 S1201s TMT10 1198 (K) NMGsWASLVQK (H) NMGS(0.99)WAS(0.0)LVQK K:TMT10,s:Phosphorylated S BRD4 152672.5 1 8 941.1 198.07 HUMAN 1 -4.0676 -10.9578 LKISELGSQLSDEAV-p Q96T37;S179-p LKISELGSQLSDEAV 0.401454832845887 0.0625528930788596 -0.143666666666667 0.253666666666667 7.31732523329686 16.023075511531 -0.143666666666667 0.253666666666667 0.1854673542528 0.0249857533717963 -1.51645292881447 3.07044883090992 Q96T37 RBM15 Q96T37.S179.p_RBM15 Q96T37_S179s _1_1_179_179 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33057.33057.4 18.84 18.84 1.939 3 1 1 0 747.8725 2908.498 S179s TMT10 174 (K) ISELGsQLSDEAVEDGLFHEFK (R) IS(0.0)ELGS(0.99)QLS(0.0)DEAVEDGLFHEFK K:TMT10,s:Phosphorylated S RBM15 107414.9 4 7 55.1 724.11 HUMAN 1 -7.3173 16.0231 LKITGCASPGKTVTI-p P50991;S381-p LKITGCASPGKTVTI 0.334991410736759 0.54050937745623 -0.16 -0.124 8.8639744803399 3.5943731258469 -0.16 -0.124 0.129898026183789 0.437081764257856 -1.78481644042203 -0.838621771652578 P50991 CCT4 P50991.S381.p_CCT4 P50991_S381s _1_1_381_381 P50991 P50991|P50991-2 T-complex protein 1 subunit delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9984.9984.2 12.42 12.42 4.59 2 1 1 0 714.8692 1348.7659 S381s TMT10 376 (K) ITGCAsPGK (T) IT(0.0)GCAS(0.99)PGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCT4 58436.7 3 6 2761.1 71.47 HUMAN 1 -8.864 -3.5944 LKIVGNGSEQQLQKE-p Q9Y3P9;S56-p LKIVGNGSEQQLQKE 0.597271895016862 0.00711113748864067 -0.0776666666666667 -0.462666666666667 4.13418416379021 30.7701018640389 -0.0776666666666666 -0.462666666666667 0.385994915175886 0.000837509638056227 -0.942693673621848 -6.65898063865952 Q9Y3P9 RABGAP1 Q9Y3P9.S56.p_RABGAP1 Q9Y3P9_S56s _1_1_56_56 Q9Y3P9 Q9Y3P9|Q9Y3P9-3|Q9Y3P9-4 Rab GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14444.14444.2 16.98 9.61 99 1 1 1 0 919.9932 1759.0114 S56s TMT10 51 (K) IVGNGsEQQLQK (E) IVGNGS(1.0)EQQLQK K:TMT10,s:Phosphorylated S RABGAP1 122989.9 6 5 520.1 284.17 HUMAN 1 -4.1342 -30.7701 LKIYDILSDNGPQQP-p Q96RT1-8;S888-p LKIYDILSDNGPQQP 0.274169202050164 0.418345342767902 0.18 0.0833333333333334 10.6424945175771 5.03662932628433 0.18 0.0833333333333334 0.0862483009112533 0.313571849373369 2.09358899077596 1.11054056445301 Q96RT1 ERBB2IP Q96RT1.8.S888.p_ERBB2IP Q96RT1-8_S888s _1_1_888_888 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5|Q96RT1-4|Q96RT1-6|Q96RT1-7 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25507.25507.3 14.91 14.91 4.085 5 1 1 0 838.7697 2434.323 S888s TMT10 883 (K) IYDILsDNGPQQPSTTVK (I) IY(0.0)DILS(0.99)DNGPQQPS(0.0)T(0.0)T(0.0)VK K:TMT10,s:Phosphorylated S ERBIN 159762.8 1 14 81.1 633.5 HUMAN 1 10.6425 5.0366 LKKAVVQSPQVTEVL-p Q3KQU3;S834-p LKKAVVQSPQVTEVL 0.761779263168734 0.0266367623553881 -0.0463333333333333 -0.37 2.26191182466247 21.3709437492864 -0.0463333333333334 -0.37 0.594030600523555 0.00729299011761195 -0.566053605598173 -4.17529009135956 Q3KQU3 MAP7D1 Q3KQU3.S834.p_MAP7D1 Q3KQU3_S834s _1_1_834_834 Q3KQU3 Q3KQU3|Q3KQU3-4 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21667.21667.2 10.83 10.83 3.231 2 1 1 0 968.5496 1856.1257 S834s TMT10 829 (K) KAVVQsPQVTEVL (-) KAVVQS(0.99)PQVT(0.0)EVL K:TMT10,s:Phosphorylated S MAP7D1 93160.6 2 22 160.1 495.56 HUMAN 1 -2.2619 -21.3709 LKKDAPTSPASVASS-p H0YL70;S296-p LKKDAPTSPASVASS 0.916145150674614 0.744352220936142 0.0166666666666667 0.0353333333333334 0.742539710032337 1.76963370854703 0.0166666666666667 0.0353333333333334 0.842841728334425 0.665329268852905 0.207988946057233 0.457108126862751 H0YL70 TLE3 H0YL70.S296.p_TLE3 H0YL70_S296s _1_1_296_296 H0YL70 H0YL70|H0YKN8|H0YKT5|Q04726|Q04726-4|A0A0D9SES8|Q04726-5|Q04726-6|Q04726-3|Q04726-7|Q04726-2|H0YNT2 Transducin-like enhancer protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11037.11037.2 18.16 18.16 1.11 10 1 1 0 1151.5665 2222.1552 S296s TMT10 292 (K) DAPTsPASVASSSSTPSSK (T) DAPT(0.0)S(0.99)PAS(0.0)VAS(0.0)S(0.0)S(0.0)S(0.0)T(0.0)PS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S TLE3 85275.2 5 5 447.1 309.48 HUMAN 1 0.7425 1.7696 LKKDASSSPASTASS-p Q04724;S286-p LKKDASSSPASTASS 0.878395260815069 0.444597279975579 0.0236666666666667 0.0983333333333334 1.10667932039364 4.68730670043877 0.0236666666666667 0.0983333333333334 0.77505418915232 0.339835958271732 0.300427824616757 1.04623030740121 Q04724 TLE1 Q04724.S286.p_TLE1 Q04724_S286s _1_1_286_286 Q04724 Q04724 Transducin-like enhancer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10780.10780.2 19.25 15.54 1.149 11 1 1 0 1140.5536 2200.1345 S286s TMT10 282 (K) DASSsPASTASSASSTSLK (S) DAS(0.0)S(0.0)S(0.99)PAS(0.0)T(0.0)AS(0.0)S(0.0)AS(0.0)S(0.0)T(0.0)S(0.0)LK K:TMT10,s:Phosphorylated S TLE1 84112.2 4 2 3332.1 53.66 HUMAN 1 1.1067 4.6873 LKKDNQESSDAELSS-p Q96JM3;S626-p LKKDNQESSDAELSS 0.348527324426129 0.544120842159125 -0.195 0.075 8.50708132841278 3.55384505325366 -0.195 0.075 0.141023622782943 0.441179673219286 -1.72303277445365 0.830694877550063 Q96JM3 CHAMP1 Q96JM3.S626.p_CHAMP1 Q96JM3_S626sS627s_2_2_626_627 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18808.18808.3 16.09 16.09 3.934 6 2 2 0 840.6999 2360.1506 S626s S627s TMT10 622 (K) DNQEssDAELSSSEYIK (T) DNQES(0.99)S(0.99)DAELS(0.0)S(0.0)S(0.0)EY(0.0)IK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 3 50 25.1 950.05 HUMAN 1 -8.5071 3.5538 LKKDTCYSPKPSVYL-p Q9Y5K6;S542-p LKKDTCYSPKPSVYL 0.228623979957718 0.0221420189415373 -0.188333333333333 -0.434 12.318005166594 22.6066007199064 -0.188333333333333 -0.434 0.0586407455655119 0.00548706276512487 -2.38887017708419 -4.45715734453642 Q9Y5K6 CD2AP Q9Y5K6.S542.p_CD2AP Q9Y5K6_S542s _1_1_542_542 Q9Y5K6 Q9Y5K6 CD2-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17666.17666.3 19.55 19.55 1.128 10 1 1 0 981.4998 2862.5162 S542s TMT10 538 (K) DTCYsPKPSVYLSTPSSASK (A) DT(0.0)CY(0.0)S(0.99)PKPS(0.0)VY(0.0)LS(0.0)T(0.0)PS(0.0)S(0.0)AS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CD2AP 71678 7 9 413.1 321.76 HUMAN 1 -12.318 -22.6066 LKKEGLISQDGSSLE-p J3KMZ8;S113-p LKKEGLISQDGSSLE 0.726488633986434 0.600056528052974 -0.0483333333333333 0.063 2.63162874576597 3.00602474795025 -0.0483333333333333 0.063 0.545553222492351 0.50049244393182 -0.644544639592103 0.721534340519423 J3KMZ8 DPF2 J3KMZ8.S113.p_DPF2 J3KMZ8_S113s _1_1_113_113 J3KMZ8 J3KMZ8|Q92785|Q92785-2 Zinc finger protein ubi-d4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.31040.31040.3 14.94 14.94 3.769 3 1 1 0 666.3447 1917.049 S113s TMT10 109 (K) EGLIsQDGSSLEALLR (T) EGLIS(0.99)QDGS(0.0)S(0.0)LEALLR s:Phosphorylated S DPF2 46920.6 2 1 1300.1 156.5 HUMAN 1 -2.6316 3.006 LKKGKVKSIDLPIQS-p O95757;S579-p LKKGKVKSIDLPIQS 0.472747504381845 0.132821982157163 0.107333333333333 -0.170333333333333 5.99779441410371 11.5558125314148 0.107333333333333 -0.170333333333333 0.251316242937731 0.0698905964624068 1.2841706651084 -2.25271126957548 O95757 HSPA4L O95757.S579.p_HSPA4L O95757_S579s _1_1_579_579 O95757 O95757|E9PDE8 Heat shock 70 kDa protein 4L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20501.20501.4 10.53 10.53 4.062 3 1 1 0 642.869 2488.4888 S579s TMT10 575 (K) GKVKsIDLPIQSSLCR (Q) GKVKS(0.99)IDLPIQS(0.0)S(0.0)LCR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S HSPA4L 95537.8 4 2 549.3 274.67 HUMAN 1 5.9978 -11.5558 LKKKELKSLDIYSFI-p Q9NR50;S260-p LKKKELKSLDIYSFI 0.0832139716415161 0.385354682137221 -0.528 0.11 23.0619239173416 5.50548447065298 -0.528 0.11 0.00494091756669966 0.281482599395418 -4.56908143235024 1.19567449286341 Q9NR50 EIF2B3 Q9NR50.S260.p_EIF2B3 Q9NR50_S260s _1_1_260_260 Q9NR50 Q9NR50|Q9NR50-2|Q9NR50-3 Translation initiation factor eIF-2B subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33035.33035.3 10.08 10.08 3.367 3 1 1 0 541.9659 1543.9136 S260s TMT10 260 (K) sLDIYSFIK (E) S(0.99)LDIY(0.0)S(0.0)FIK K:TMT10,s:Phosphorylated S EIF2B3 50981.1 1 1 6209.1 13.14 HUMAN 1 -23.0619 5.5055 LKKKKRLSQSDEDVI-p Q9H7D7;S121-p LKKKKRLSQSDEDVI 0.755854355752364 0.917335215622243 0.0513333333333333 -0.011 2.32465424923406 0.527570873403864 0.0513333333333334 -0.011 0.58551034814772 0.88561081742914 0.579556364781506 -0.15076575575108 Q9H7D7 WDR26 Q9H7D7.S121.p_WDR26 Q9H7D7_S121s _1_1_121_121 Q9H7D7 Q9H7D7|Q9H7D7-2|Q9H7D7-4|Q9H7D7-3 WD repeat-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9898.9898.3 14.35 9.05 1.147 2 1 1 0 542.9397 1546.8387 S121s TMT10 119 (K) RLsQSDEDVIR (L) RLS(0.99)QS(0.0)DEDVIR s:Phosphorylated S WDR26 73092.6 9 1 2543.1 79.17 HUMAN 1 2.3247 -0.5276 LKKKPRRSCTLPNYT-p A6NHR9;S1709-p LKKKPRRSCTLPNYT 0.523162183518031 0.0752824639124348 0.113 0.300666666666667 5.20384049136693 14.9095173465699 0.113 0.300666666666667 0.301728233997649 0.0322885294053666 1.14128512974407 2.85964599443558 A6NHR9 SMCHD1 A6NHR9.S1709.p_SMCHD1 A6NHR9_S1709s _1_1_1709_1709 A6NHR9 A6NHR9|A6NHR9-2|A6NHR9-3 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14533.14541.2 11.6 7.73 2.128 4 1 1 0 811.4065 1541.8398 S1709s TMT10 1709 (R) sCTLPNYTK (G) S(0.99)CT(0.0)LPNY(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SMCHD1 228081 3 7 2211.1 93.37 HUMAN 1 5.2038 14.9095 LKKLLSPSNEKLTIS-p Q14694;S549-p LKKLLSPSNEKLTIS 0.0825441086817992 0.242304556177019 -0.348 -0.124333333333333 23.1496001156895 8.11058658935551 -0.348 -0.124333333333333 0.00484216950662021 0.154504574045707 -4.5898820874801 -1.6538073025986 Q14694 USP10 Q14694.S549.p_USP10 Q14694_S549s _1_1_549_549 Q14694 Q14694-2|Q14694-3 Ubiquitin carboxyl-terminal hydrolase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12942.12942.3 11.27 11.27 3.046 2 1 1 0 595.0179 1703.067 S549s TMT10 544 (K) KLLSPsNEK (L) KLLS(0.0)PS(0.99)NEK K:TMT10,s:Phosphorylated S USP10 87759.8 1 12 358.1 346.34 HUMAN 1 -23.1496 -8.1106 LKKLQEESDLELAKE-p O75822;S127-p LKKLQEESDLELAKE 0.145835187369471 0.206812371215438 -0.333 -0.131 17.036995784513 9.00360363658644 -0.333 -0.131 0.019783376744194 0.125788122906223 -3.26992499513291 -1.80833589257412 O75822 EIF3J O75822.S127.p_EIF3J O75822_S127s _1_1_127_127 O75822 O75822|O75822-3|O75822-2 Eukaryotic translation initiation factor 3 subunit J HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16873.16873.3 15.51 7.64 99 1 1 1 0 724.0706 2090.2312 S127s TMT10 122 (K) KLQEEsDLELAK (E) KLQEES(1.0)DLELAK K:TMT10,s:Phosphorylated S EIF3J 29176 4 3 1085.1 179.66 HUMAN 1 -17.037 -9.0036 LKKLSVPTSDEEDEV-p Q8NE71;T108-p LKKLSVPTSDEEDEV 0.731310539054784 0.582775523843535 -0.0483333333333333 0.053 2.57923987814054 3.16577776602144 -0.0483333333333333 0.053 0.552174074829567 0.482416577667475 -0.633574195407981 0.753777915114648 Q8NE71 ABCF1 Q8NE71.T108.p_ABCF1 Q8NE71_T108t _1_1_108_108 Q8NE71 Q8NE71|Q8NE71-2 ATP-binding cassette sub-family F member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15653.15653.4 14.69 14.69 1.221 3 1 1 0 716.1379 2781.5601 T108t TMT10 103 (K) KLSVPtSDEEDEVPAPKPR (G) KLS(0.0)VPT(0.99)S(0.0)DEEDEVPAPKPR K:TMT10,t:Phosphorylated T ABCF1 96380.4 34 2 203.1 449.36 HUMAN 1 -2.5792 3.1658 LKKSLRQSFRRMRRS-p Q6P1M3;S653-p LKKSLRQSFRRMRRS 0.38707572980181 0.0518127635752068 -0.156 0.343 7.62515693410071 17.1564205772435 -0.156 0.343 0.17277635459321 0.0192467738013357 -1.57005939264595 3.29097035231917 Q6P1M3 LLGL2 Q6P1M3.S653.p_LLGL2 Q6P1M3_S653s _1_1_653_653 Q6P1M3 Q15334|A0A087WW77|Q6P1M3|J3QRV5|Q6P1M3-2 Lethal(2) giant larvae protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6169.6169.3 9.95 3.78 9.952 2 1 1 0 401.5457 1122.6581 S653s TMT10 649 (K) SLRQsFR (R) S(0.0)LRQS(0.99)FR s:Phosphorylated S LLGL2 114415.8 3 6 881.1 207.2 HUMAN 1 -7.6252 17.1564 LKKSLSGSPLKVKNS-p Q9UIG0;S349-p LKKSLSGSPLKVKNS 0.507315110869701 0.000952253650599092 -0.091 -1.65866666666667 5.43604874159761 57.8475713105156 -0.091 -1.65866666666667 0.286019159336451 1.64150749092754e-06 -1.18340014532505 -21.9997362808472 Q9UIG0 BAZ1B Q9UIG0.S349.p_BAZ1B Q9UIG0_S349s _1_1_349_349 Q9UIG0 Q9UIG0|Q9UIG0-2 Tyrosine-protein kinase BAZ1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12232.12232.2 10.28 7.75 2.087 3 1 1 0 842.5049 1604.035 S349s TMT10 344 (K) KSLSGsPLK (V) KS(0.0)LS(0.0)GS(0.99)PLK K:TMT10,s:Phosphorylated S BAZ1B 172497.3 6 7 370.1 339.44 HUMAN 1 -5.436 -57.8476 LKKVEQNSRPVSCSG-p O00401;S426-p LKKVEQNSRPVSCSG 0.714879280954392 0.525499873561274 -0.077 -0.074 2.74748706425868 3.75303904811763 -0.077 -0.074 0.53119171604538 0.421401517485213 -0.668640222858064 -0.869477586747457 O00401 WASL O00401.S426.p_WASL O00401_S426s _1_1_426_426 O00401 O00401 Neural Wiskott-Aldrich syndrome protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.3794.3794.4 9.36 9.36 9.357 3 1 1 0 536.2772 2062.1228 S426s TMT10 421 (K) KVEQNsRPVSCSGR (D) KVEQNS(0.99)RPVS(0.0)CS(0.0)GR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S WASL 55225.3 3 2 2628.1 76.35 HUMAN 1 -2.7475 -3.753 LKLFQKNSPMEDLGA-p Q66K14;S463-p LKLFQKNSPMEDLGA 0.422648449149654 0.0362814165994234 -0.122333333333333 -0.506666666666667 6.89118907500072 19.3869771538143 -0.122333333333333 -0.506666666666667 0.204588440785533 0.0115160166633569 -1.44195267076493 -3.74523838375086 Q66K14 TBC1D9B Q66K14.S463.p_TBC1D9B Q66K14_S463s _1_1_463_463 Q66K14 Q66K14|Q66K14-2 TBC1 domain family member 9B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15724.15724.2 13.9 8.68 99 1 1 1 0 800.3926 1519.8191 S463s TMT10 462 (K) NsPMEDLGAK (G) NS(1.0)PMEDLGAK K:TMT10,s:Phosphorylated S TBC1D9B 141663.3 4 8 988.1 191.79 HUMAN 1 -6.8912 -19.387 LKLGASNSPGQPNSV-p P49756;S677-p LKLGASNSPGQPNSV 0.671622580526137 0.286564918820824 0.0706666666666667 0.106 3.23793749238716 7.16012950974704 0.0706666666666667 0.106 0.474467260976089 0.192303438178276 0.768339291369934 1.48859421521279 P49756 RBM25 P49756.S677.p_RBM25 P49756_S677s _1_1_677_677 P49756 P49756 RNA-binding protein 25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11592.12165.2 17.63 17.63 2.392 3 1 1 0 947.4941 1814.0172 S677s TMT10 672 (K) LGASNsPGQPNSVK (R) LGAS(0.0)NS(0.99)PGQPNS(0.0)VK K:TMT10,s:Phosphorylated S RBM25 100526.1 39 2 353.1 350.09 HUMAN 1 3.2379 7.1601 LKLISSDSED_____-p P54274;S437-p LKLISSDSED_____ 0.844605466455093 0.0387538405396493 -0.046 -0.336666666666667 1.41728214104217 18.9545404754271 -0.046 -0.336666666666667 0.72155889680027 0.0127217235081258 -0.375505098034349 -3.65489456128431 P54274 TERF1 P54274.S437.p_TERF1 P54274_S437s _1_1_437_437 P54274 P54274|P54274-2 Telomeric repeat-binding factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20319.20319.2 10.16 10.16 1.23 3 1 1 0 822.9262 1564.8834 S437s TMT10 430 (K) LKLISSDsED (-) LKLIS(0.0)S(0.0)DS(0.99)ED K:TMT10,s:Phosphorylated S TERF1 50701.1 1 3 3678.1 45.5 HUMAN 1 -1.4173 -18.9545 LKLKRERSKDFQVKK-p Q5VUA4;S1945-p LKLKRERSKDFQVKK 0.178441218280072 0.00182475814109071 0.693333333333333 -0.915666666666667 14.7810903573736 43.1335041351625 0.693333333333334 -0.915666666666667 0.0332576044918228 4.86014902949793e-05 2.83749443190615 -11.6346952453079 Q5VUA4 ZNF318 Q5VUA4.S1945.p_ZNF318 Q5VUA4_S1945s _1_1_1945_1945 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12519.12519.3 10.69 10.69 99 1 1 1 0 540.3107 1538.9509 S1945s TMT10 1945 (R) sKDFQVK (K) S(1.0)KDFQVK K:TMT10,s:Phosphorylated S ZNF318 252762.4 2 29 37.1 870.88 HUMAN 1 14.7811 -43.1335 LKLLSGASTKRKPRV-p Q7Z6J0;S727-p LKLLSGASTKRKPRV 0.374297731091176 0.0191641361648226 0.191333333333333 -0.387 7.90121991286797 23.6125832906672 0.191333333333333 -0.387 0.162135460247135 0.00435252897514545 1.61802011518074 -4.69531223138088 Q7Z6J0 SH3RF1 Q7Z6J0.S727.p_SH3RF1 Q7Z6J0_S727s _1_1_727_727 Q7Z6J0 Q7Z6J0 E3 ubiquitin-protein ligase SH3RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15823.15823.2 9.27 1.69 1.113 3 1 1 0 657.8758 1234.7771 S727s TMT10 722 (K) LLSGAsTK (R) LLS(0.0)GAS(0.99)T(0.0)K K:TMT10,s:Phosphorylated S SH3RF1 94268.4 1 5 2961.1 64.64 HUMAN 1 7.9012 -23.6126 LKLMLPDSPLVEEGR-p Q9P2F8;S1461-p LKLMLPDSPLVEEGR 0.204713889706557 0.0127042682869203 -0.194666666666667 -0.492 13.3274320109379 26.4321659831299 -0.194666666666667 -0.492 0.046479002494628 0.00227396304057782 -2.57023923494901 -5.40862707451274 Q9P2F8 SIPA1L2 Q9P2F8.S1461.p_SIPA1L2 Q9P2F8_S1461s _1_1_1461_1461 Q9P2F8 Q9P2F8|Q9P2F8-2 Signal-induced proliferation-associated 1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22015.22015.3 16.03 10.97 99 1 1 1 0 640.9982 1841.0152 S1461s TMT10 1456 (K) LMLPDsPLVEEGRR (K) LMLPDS(1.0)PLVEEGRR s:Phosphorylated S SIPA1L2 192488.1 5 10 322.1 363.46 HUMAN 1 -13.3274 -26.4322 LKLQGQVSAKKRLGT-p O95235;S825-p LKLQGQVSAKKRLGT 0.17565221846002 0.00163952820149382 -0.242333333333333 -0.874333333333333 15.0203742964488 44.376630240336 -0.242333333333333 -0.874333333333333 0.0314747703728453 3.65037075117231e-05 -2.88227326269069 -12.2866046256731 O95235 KIF20A O95235.S825.p_KIF20A O95235_S825s _1_1_825_825 O95235 O95235|O95235-2 Kinesin-like protein KIF20A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10630.10630.2 11.64 5.19 99 1 1 1 0 684.8855 1288.7989 S825s TMT10 820 (K) LQGQVsAK (K) LQGQVS(1.0)AK K:TMT10,s:Phosphorylated S KIF20A 101303.1 5 10 845.1 213.8 HUMAN 1 -15.0204 -44.3766 LKLQIEGSDPSFNYK-p Q9ULJ7;S1417-p LKLQIEGSDPSFNYK 0.270081684712429 0.952589514066416 0.161 0.00700000000000002 10.7737174945056 0.299560027815092 0.161 0.00700000000000003 0.0836812676584864 0.933348851096455 2.11651207137539 0.0875869938167319 Q9ULJ7 ANKRD50 Q9ULJ7.S1417.p_ANKRD50 Q9ULJ7_S1417s _1_1_1417_1417 Q9ULJ7 Q9ULJ7 Ankyrin repeat domain-containing protein 50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19932.19932.3 8.7 8.7 8.696 3 1 1 0 798.4334 2313.3058 S1417s TMT10 1412 (K) LQIEGsDPSFNYKK (E) LQIEGS(0.99)DPS(0.0)FNY(0.0)KK K:TMT10,s:Phosphorylated S ANKRD50 157796.3 1 7 1875.1 109.69 HUMAN 1 10.7737 0.2996 LKLREQGTESRSSTP-p P42166;T154-p LKLREQGTESRSSTP 0.958214940795929 0.111964500906984 -0.0146666666666667 0.209 0.359782857669806 12.5502410374407 -0.0146666666666667 0.209 0.920495594341496 0.0555873404927881 -0.104554293157963 2.42905177992119 P42166 TMPO P42166.T154.p_TMPO P42166_T154t _1_1_154_154 P42166 P42166|P42167|G5E972|P42167-2|P42167-3 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4019.4019.3 7.54 3.33 1.526 2 1 1 0 462.2315 1304.712 T154t TMT10 149 (K) LREQGtESR (S) LREQGT(0.99)ES(0.0)R t:Phosphorylated T TMPO 76061.2 4 6 123.1 546.19 HUMAN 1 -0.3598 12.5502 LKLSGEHSESSTPRP-p Q7Z3K3;S1364-p LKLSGEHSESSTPRP 0.0708573711125562 0.00714231278100688 0.402666666666667 0.647 24.8235170672174 30.7241984566749 0.402666666666667 0.647 0.00329342890865202 0.000846408769432649 4.99921749715966 6.64465622561075 Q7Z3K3 POGZ Q7Z3K3.S1364.p_POGZ Q7Z3K3_S1364s _1_1_1364_1364 Q7Z3K3 Q7Z3K3|Q7Z3K3-6|Q7Z3K3-3|Q7Z3K3-2|Q7Z3K3-7|Q7Z3K3-5 Pogo transposable element with ZNF domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4253.4253.4 15.47 15.47 1.318 5 1 1 0 462.9755 1768.9139 S1364s TMT10 1359 (K) LSGEHsESSTPRPR (S) LS(0.0)GEHS(0.99)ES(0.0)S(0.0)T(0.0)PRPR s:Phosphorylated S POGZ 157451.9 3 13 811.1 221.02 HUMAN 1 24.8235 30.7242 LKLYYGLSEGEAAGR-p Q9UID3;S44-p LKLYYGLSEGEAAGR 0.90552186362789 0.204062304723177 -0.019 -0.140666666666667 0.846273477428274 9.08080687557854 -0.019 -0.140666666666667 0.822948489163778 0.123571782814036 -0.234860416323986 -1.82169024033312 Q9UID3 VPS51 Q9UID3.S44.p_VPS51 Q9UID3_S44s _1_1_44_44 Q9UID3 Q9UID3|E9PQD5|E9PKE5|A0A1W2PQZ2 Vacuolar protein sorting-associated protein 51 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31322.31322.4 17.17 17.17 3.688 5 1 1 0 1150.3105 4518.2505 S44s TMT10 39 (K) LYYGLsEGEAAGRPAGPDPLDPTDLNGAHFDPEVYLDK (L) LY(0.0)Y(0.0)GLS(0.99)EGEAAGRPAGPDPLDPT(0.0)DLNGAHFDPEVY(0.0)LDK K:TMT10,s:Phosphorylated S VPS51 86953.6 2 3 2362.1 86.5 HUMAN 1 -0.8463 -9.0808 LKMISTPSPKKSMKM-p Q53F19;S415-p LKMISTPSPKKSMKM 0.148266672319898 0.00332740927341359 -0.243 -0.711 16.7820331874211 37.089777092843 -0.243 -0.711 0.020979574766255 0.000195443976730365 -3.21982676024718 -8.8963360862423 Q53F19 NCBP3 Q53F19.S415.p_NCBP3 Q53F19_S415s _1_1_415_415 Q53F19 Q53F19|Q53F19-2 Nuclear cap-binding protein subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12918.12918.2 8.43 8.43 1.777 3 1 1 0 878.5072 1676.0384 S415s TMT10 410 (K) MISTPsPKK (S) MIS(0.0)T(0.0)PS(0.99)PKK K:TMT10,s:Phosphorylated S NCBP3 70705.4 12 3 1350.1 150.87 HUMAN 1 -16.782 -37.0898 LKMKLILSPKEKGSS-p Q9UGU5;S197-p LKMKLILSPKEKGSS 0.787811274400252 0.00235687401929515 0.0556666666666666 -0.778666666666667 2.00004677286789 40.3679504457263 0.0556666666666667 -0.778666666666667 0.630950549200302 9.18766084996649e-05 0.508812398500446 -10.2981086609165 Q9UGU5 HMGXB4 Q9UGU5.S197.p_HMGXB4 Q9UGU5_S197s _1_1_197_197 Q9UGU5 Q9UGU5 HMG domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17922.17922.2 11.53 11.53 99 1 1 1 0 848.0241 1615.0761 S197s TMT10 194 (K) LILsPKEK (G) LILS(1.0)PKEK K:TMT10,s:Phosphorylated S HMGXB4 66052.7 3 3 1005.1 189.25 HUMAN 1 2 -40.368 LKMTQRISMRFQEYH-p Q9Y5J7;S64-p LKMTQRISMRFQEYH 0.471987673858967 0.614311173288766 -0.154666666666667 -0.0603333333333333 6.01466297666484 2.87710897649191 -0.154666666666667 -0.0603333333333333 0.2503419912466 0.515571737592507 -1.28717526803132 -0.695243961396367 Q9Y5J7 TIMM9 Q9Y5J7.S64.p_TIMM9 Q9Y5J7_S64s _1_1_64_64 Q9Y5J7 Q9Y5J7 Mitochondrial import inner membrane translocase subunit Tim9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8829.8829.3 9.05 9.05 9.048 2 1 1 0 444.5558 1251.6863 S64s TMT10 59 (K) MTQRIsMR (F) MT(0.0)QRIS(0.99)MR s:Phosphorylated S TIMM9 10605.9 2 1 6857.1 9.05 HUMAN 1 -6.0147 -2.8771 LKNEERKSQENLGNP-p Q9H0X4;S21-p LKNEERKSQENLGNP 0.150283451076775 0.0025028014201708 -0.624 0.956666666666667 16.5962819057865 39.7920988499845 -0.624 0.956666666666667 0.0218963541860943 0.000104903533035902 -3.18353655410677 10.0382404406278 Q9H0X4 FAM234A Q9H0X4.S21.p_FAM234A Q9H0X4_S21s _1_1_21_21 Q9H0X4 Q9H0X4|Q9H0X4-2|B4DGG1 Protein FAM234A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9535.9535.3 17.66 17.66 8.787 2 1 1 0 847.4391 2460.3297 S21s TMT10 21 (K) sQENLGNPSKNEDNVK (S) S(0.99)QENLGNPS(0.0)KNEDNVK K:TMT10,s:Phosphorylated S FAM234A 60286 6 1 2817.1 69.52 HUMAN 1 -16.5963 39.7921 LKNEGLSSDEEFDSV-p Q9P2M7;S1170-p LKNEGLSSDEEFDSV 0.612109580584136 0.0138524396572908 -0.0703333333333333 0.359666666666667 3.9522119820003 25.8024458774842 -0.0703333333333333 0.359666666666667 0.402511971619969 0.00262878708382563 -0.907983813889421 5.2431054953461 Q9P2M7 CGN Q9P2M7.S1170.p_CGN Q9P2M7_S1170s _1_1_1170_1170 Q9P2M7 Q9P2M7 Cingulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.37065.37065.3 20.35 20.35 1.172 12 1 1 0 1297.5679 3810.7225 S1170s TMT10 1165 (K) NEGLSsDEEFDSVYDPSSIASLLTESNLQTSSC (-) NEGLS(0.0)S(0.99)DEEFDS(0.0)VY(0.0)DPS(0.0)S(0.0)IAS(0.0)LLT(0.0)ES(0.0)NLQT(0.0)S(0.0)S(0.0)C C:Carbamidomethylation,s:Phosphorylated S CGN 136611.7 4 18 239.1 416.31 HUMAN 1 -3.9522 25.8024 LKNGSLDSPGKQDTE-p Q9Y266;S139-p LKNGSLDSPGKQDTE 0.105885561453204 0.657795418791363 -0.512666666666667 0.044 20.5468794953291 2.48735470062181 -0.512666666666667 0.044 0.00881682154156679 0.563981073616866 -3.99731201778857 0.614137942717975 Q9Y266 NUDC Q9Y266.S139.p_NUDC Q9Y266_S139s _1_1_139_139 Q9Y266 Q9Y266 Nuclear migration protein nudC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10257.10257.4 19.47 15.83 1.783 3 1 1 0 780.3622 3038.4529 S139s TMT10 134 (K) NGSLDsPGKQDTEEDEEEDEK (D) NGS(0.0)LDS(0.99)PGKQDT(0.0)EEDEEEDEK K:TMT10,s:Phosphorylated S NUDC 38299.3 15 3 739.1 234.62 HUMAN 1 -20.5469 2.4874 LKNGSMGSPVNQQPK-p Q8IW50-6;S55-p LKNGSMGSPVNQQPK 0.481005429235313 0.00634017583166706 -0.115333333333333 -0.477 5.85243390266039 31.6466442335942 -0.115333333333333 -0.477 0.25987027723165 0.000684440305769876 -1.25823096134971 -6.93739142395744 Q8IW50 FAM219A Q8IW50.6.S55.p_FAM219A Q8IW50-6_S55s _1_1_55_55 Q8IW50-6 Q8IW50-4|A0A0A0MRW0|Q8IW50-6|Q8IW50-5|A0A0A0MRW2|Q5T586|Q8IW50-2|Q8IW50-7|Q8IW50-3|A0A0A0MRW1|A0A0A0MRV9 Isoform 6 of Protein FAM219A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8362.8362.3 14.13 14.13 2.413 2 1 1 0 747.0678 2159.221 S55s TMT10 50 (K) NGSMGsPVNQQPKK (N) NGS(0.0)MGS(0.99)PVNQQPKK K:TMT10,s:Phosphorylated S FAM219A 18841.5 6 3 1822.1 112.63 HUMAN 1 -5.8524 -31.6466 LKNKAKRSLTESLES-p Q86TI0-2;S503-p LKNKAKRSLTESLES 0.219245224336186 0.91142024325533 -0.207666666666667 -0.02 12.6891419145345 0.563907037216123 -0.207666666666667 -0.02 0.053837614516393 0.878232078669008 -2.45519993133629 -0.16058726841015 Q86TI0 TBC1D1 Q86TI0.2.S503.p_TBC1D1 Q86TI0-2_S503s _1_1_503_503 Q86TI0-2 Q86TI0|Q86TI0-2 Isoform 2 of TBC1 domain family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.33048.33048.3 14.85 14.85 1.105 5 1 1 0 548.6205 1563.8791 S503s TMT10 503 (R) sLTESLESILSR (G) S(0.99)LT(0.0)ES(0.0)LES(0.0)ILS(0.0)R s:Phosphorylated S TBC1D1 132688.3 2 4 587.1 264.9 HUMAN 1 -12.6891 -0.5639 LKNKRRRSLPRPHDF-p Q6ZN18;S390-p LKNKRRRSLPRPHDF 0.362002918323239 0.0314332150549503 -0.163 -0.428333333333333 8.19804016847791 20.2977034995905 -0.163 -0.428333333333333 0.151424442415527 0.00933747925682449 -1.66949889518873 -3.93937755245711 Q6ZN18 AEBP2 Q6ZN18.S390.p_AEBP2 Q6ZN18_S390s _1_1_390_390 Q6ZN18 Q6ZN18|Q6ZN18-2|Q6ZN18-3|G5EA50 Zinc finger protein AEBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24138.24138.3 16.35 16.35 6.513 2 1 1 0 803.4033 2328.2298 S390s TMT10 390 (R) sLPRPHDFFDAQTLDAIR (H) S(0.99)LPRPHDFFDAQT(0.0)LDAIR s:Phosphorylated S AEBP2 54979.1 3 7 1557.1 131.71 HUMAN 1 -8.198 -20.2977 LKNLNHVSYGRLTFK-p P00367;S450-p LKNLNHVSYGRLTFK 0.705319541148296 0.00606430641877897 0.0583333333333333 0.558666666666667 2.84944259971559 32.0001455142593 0.0583333333333333 0.558666666666667 0.518866629194235 0.000630936204042924 0.689662902060756 7.05235092517161 P00367 GLUD1 P00367.S450.p_GLUD1 P00367_S450s _1_1_450_450 P00367 P00367|P49448|P00367-3 Glutamate dehydrogenase 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6545.6545.3 11.11 11.11 3.938 2 1 1 0 456.8929 1288.6959 S450s TMT10 445 (K) NLNHVsYGR (L) NLNHVS(0.99)Y(0.0)GR s:Phosphorylated S GLUD1 61739.1 1 4 4534.1 30.24 HUMAN 1 2.8494 32.0001 LKNLTDVSPDLDIRL-p Q8WXH0;S841-p LKNLTDVSPDLDIRL 0.59112559664338 0.36962998145014 0.0893333333333333 0.0943333333333334 4.20434726982192 5.73327577896638 0.0893333333333333 0.0943333333333334 0.379809018715481 0.267099098431926 0.955994729942951 1.23661744584221 Q8WXH0 SYNE2 Q8WXH0.S841.p_SYNE2 Q8WXH0_S841s _1_1_841_841 Q8WXH0 Q8WXH0-2|A0A0A0MRE3|G3V5X4 Nesprin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21483.21483.2 15.41 9.03 3.429 2 1 1 0 833.9174 1586.8587 S841s TMT10 836 (K) NLTDVsPDLDIR (L) NLT(0.0)DVS(0.99)PDLDIR s:Phosphorylated S SYNE2 802304.8 1 4 188.1 472.65 HUMAN 1 4.2043 5.7333 LKNNDEGSLDIYAGL-p Q9UKL3;S29-p LKNNDEGSLDIYAGL 0.638464920743809 0.296703534615823 0.119666666666667 -0.109666666666667 3.63571858571855 6.96545216680797 0.119666666666667 -0.109666666666667 0.432940427282003 0.201119779092868 0.846823257089002 -1.45456455715409 Q9UKL3 CASP8AP2 Q9UKL3.S29.p_CASP8AP2 Q9UKL3_S29s _1_1_29_29 Q9UKL3 Q9UKL3|A0A087WTW5 CASP8-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25851.25851.3 14.9 14.9 4.072 6 1 1 0 956.1173 2786.3732 S29s TMT10 24 (K) NNDEGsLDIYAGLDSAVSDSASK (S) NNDEGS(0.99)LDIY(0.0)AGLDS(0.0)AVS(0.0)DS(0.0)AS(0.0)K K:TMT10,s:Phosphorylated S CASP8AP2 224993 1 2 740.1 234.21 HUMAN 1 3.6357 -6.9655 LKNPERPSPIQLYSP-p Q71F56;S1791-p LKNPERPSPIQLYSP 0.113753456802484 0.0307832977877963 -0.415666666666667 0.323333333333333 19.6899081633036 20.432469207407 -0.415666666666667 0.323333333333333 0.0107401212335568 0.00905217787542423 -3.81271509828334 3.96856728898666 Q71F56 MED13L Q71F56.S1791.p_MED13L Q71F56_S1791s _1_1_1791_1791 Q71F56 Q71F56 Mediator of RNA polymerase II transcription subunit 13-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32845.32845.4 16.52 13.7 2.915 3 1 1 0 729.6655 2835.6537 S1791s TMT10 1786 (K) NPERPsPIQLYSPPFILAPIK (D) NPERPS(0.99)PIQLY(0.0)S(0.0)PPFILAPIK K:TMT10,s:Phosphorylated S MED13L 245507 1 17 415.1 321.44 HUMAN 1 -19.6899 20.4325 LKNPPENSDSGTGKK-p P55010;S149-p LKNPPENSDSGTGKK 0.10503732738293 0.0515803938656975 0.315333333333333 -0.237333333333333 20.6147589530883 17.1818642901504 0.315333333333333 -0.237333333333333 0.00868008753134259 0.019134343712706 4.01214408148894 -3.2959956138544 P55010 EIF5 P55010.S149.p_EIF5 P55010_S149s _1_1_149_149 P55010 P55010 Eukaryotic translation initiation factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5619.5619.3 7.02 4.49 2.716 3 1 1 0 700.0317 2018.1121 S149s TMT10 144 (K) NPPENsDSGTGKK (E) NPPENS(0.99)DS(0.0)GT(0.0)GKK K:TMT10,s:Phosphorylated S EIF5 49678.3 4 2 980.1 192.67 HUMAN 1 20.6148 -17.1819 LKNSRASSRPFRASS-p Q8IU68;S522-p LKNSRASSRPFRASS 0.148266672319898 0.0157426869475072 1.03766666666667 -1.131 16.7960592431527 24.9231007394366 1.03766666666667 -1.131 0.0209119280349773 0.0032187698602981 3.22257411319494 -5.018088777949 Q8IU68 TMC8 Q8IU68.S522.p_TMC8 Q8IU68_S522s _1_1_522_522 Q8IU68 Q14978-2|Q14978-3|Q8IU68|Q8IU68-2 Transmembrane channel-like protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4637.4637.2 7.43 2.29 1.105 2 1 1 0 565.2902 1049.6053 S522s TMT10 520 (R) ASsRPFR (A) AS(0.0)S(0.99)RPFR s:Phosphorylated S TMC8 82666.8 2 1 7161.1 7.43 HUMAN 1 16.7961 -24.9231 LKNYKGNSIKESIRR-p A8K070;S192-p LKNYKGNSIKESIRR 0.178115895866256 0.188293580677447 -0.359666666666667 -0.144 14.805080711336 9.53764786293306 -0.359666666666667 -0.144 0.0330743965300207 0.11123340037939 -2.84197321475158 -1.90075451799394 A8K070 NotFound A8K070.S192.p_NotFound A8K070_S192s _1_1_192_192 A8K070 A8K070|Q13098|A0A096LPJ3|Q13098-5|A0A096LP07|C9JFE4 COP9 signalosome complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8463.8463.3 8.33 8.33 8.327 2 1 1 0 564.3214 1610.9833 S192s TMT10 187 (K) NYKGNsIK (E) NY(0.0)KGNS(0.99)IK K:TMT10,s:Phosphorylated S GPS1 59605.7 1 2 2547.1 79 HUMAN 1 -14.8051 -9.5376 LKPCARASFETLPNI-p Q9H019;S41-p LKPCARASFETLPNI 0.792593719033847 0.00473926529764594 0.044 0.854333333333333 1.94820875967259 33.9973742137727 0.044 0.854333333333333 0.638526791194109 0.000398347942758841 0.497301704333897 7.73230672270138 Q9H019 MTFR1L Q9H019.S41.p_MTFR1L Q9H019_S41s _1_1_41_41 Q9H019 Q9H019|Q9H019-3|Q9H019-2|E9PRK5 Mitochondrial fission regulator 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.31118.31118.3 12.5 12.5 1.204 3 1 1 0 682.3368 1965.0313 S41s TMT10 40 (R) AsFETLPNISDLCLR (D) AS(0.99)FET(0.0)LPNIS(0.0)DLCLR C:Carbamidomethylation,s:Phosphorylated S MTFR1L 32413.3 1 1 1618.1 127.17 HUMAN 1 1.9482 33.9974 LKPDVRLSRGSIDRE-p E7ESA6;S884-p LKPDVRLSRGSIDRE 0.0977397848374227 0.0751426564490667 -0.375666666666667 -0.213333333333333 21.3791108678201 14.9192760765989 -0.375666666666667 -0.213333333333333 0.00727928818331669 0.0322160575445622 -4.18137355328279 -2.86147008649981 E7ESA6 NotFound E7ESA6.S884.p_NotFound E7ESA6_S884s _1_1_884_884 E7ESA6 E7ESA6|Q05397-5|Q05397-7|E9PEI4|B4DWJ1|Q05397-6 Focal adhesion kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17053.17053.3 9.36 4.51 99 1 1 1 0 590.3473 1689.0576 S884s TMT10 876 (R) FLKPDVRLsR (G) FLKPDVRLS(1.0)R K:TMT10,s:Phosphorylated S PTK2 124992.4 4 8 979.1 192.68 HUMAN 1 -21.3791 -14.9193 LKPEHRNSVPCQDPI-p Q8IZ83;S56-p LKPEHRNSVPCQDPI 0.778556038790824 0.86740165726671 0.048 0.025 2.08876146198312 0.869411873238536 0.048 0.025 0.618192673610457 0.818575633116707 0.528370392480277 0.240769860526902 Q8IZ83 ALDH16A1 Q8IZ83.S56.p_ALDH16A1 Q8IZ83_S56s_1_1_56_56 Q8IZ83 Q8IZ83 Aldehyde dehydrogenase family 16 member A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32522.32559.5 15.99 15.99 3.95 3 1 1 0 989.0905 4860.4562 S56s N67n TMT10 48 (K) WLKPEHRNsVPCQDPITGEnLASCLQAQAEDVAAAVEAAR (M) WLKPEHRN(0.0)S(0.99)VPCQDPIT(0.0)GEN(0.99)LAS(0.0)CLQAQAEDVAAAVEAAR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated ALDH16A1 86152.9 1 1 3293.1 54.73 HUMAN 1 2.0888 0.8694 LKPGEEPSEYTDEED-p O15173-2;S232-p LKPGEEPSEYTDEED 0.0784677143790593 0.345434288793013 -0.566666666666667 0.134 23.586701348826 6.11768077994707 -0.566666666666667 0.134 0.00437854548028955 0.244473574231719 -4.69450894797924 1.3051842115012 O15173 PGRMC2 O15173.2.S232.p_PGRMC2 O15173-2_S232sT235t_2_2_232_235 O15173-2 O15173-2|U3KQM0|D3DNX8 Isoform 2 of Membrane-associated progesterone receptor component 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14916.14916.5 20.17 20.17 2.075 4 2 2 0 730.9595 3490.8359 S232s T235t TMT10 224 (R) LLKPGEEPsEYtDEEDTKDHNK (Q) LLKPGEEPS(0.99)EY(0.0)T(0.99)DEEDT(0.0)KDHNK K:TMT10,s:Phosphorylated S,t:Phosphorylated T PGRMC2 26226.7 9 4 2278.1 89.96 HUMAN 1 -23.5867 6.1177 LKPGRKDSADDGELG-p Q9P275-2;S18-p LKPGRKDSADDGELG 0.472567058699638 0.0263581786161247 -0.15 0.347666666666667 6.0003355822529 21.452155117799 -0.15 0.347666666666667 0.251169234386255 0.00715788123512218 -1.28462336692602 4.19347010766132 Q9P275 USP36 Q9P275.2.S18.p_USP36 Q9P275-2_S18s _1_1_18_18 Q9P275-2 Q9P275-2|A0A075B784|E9PEW0|Q8IXW9 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10838.10838.4 8.65 8.65 99 1 1 1 0 721.4024 2802.6131 S18s TMT10 9 (K) EALKPGRKDsADDGELGK (L) EALKPGRKDS(1.0)ADDGELGK K:TMT10,s:Phosphorylated S USP36 124218 2 1 241.1 413.35 HUMAN 1 -6.0003 21.4522 LKPKIHGSGHVEEPA-p Q12955;S4290-p LKPKIHGSGHVEEPA 0.173902354947895 0.188411674756143 0.735333333333333 -0.193333333333333 15.1311859556732 9.53184231154586 0.735333333333334 -0.193333333333333 0.0306818402537897 0.111382194128206 2.90309161406829 -1.89974910599273 Q12955 ANK3 Q12955.S4290.p_ANK3 Q12955_S4290s _1_1_4290_4290 Q12955 Q12955|Q12955-4|Q12955-5|Q12955-7|Q12955-6 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14807.14807.3 10.58 10.58 5.542 3 1 1 0 843.7706 2449.324 S4290s TMT10 4287 (K) IHGsGHVEEPASPLAAYQK (S) IHGS(0.99)GHVEEPAS(0.0)PLAAY(0.0)QK K:TMT10,s:Phosphorylated S ANK3 482683.6 1 30 135.1 530.51 HUMAN 1 15.1312 -9.5318 LKPPKNPSPVVLGLD-p Q8TCB7;S274-p LKPPKNPSPVVLGLD 0.645237890381629 0.0178266089424659 -0.163666666666667 -0.337333333333333 3.56121439534267 24.086812156749 -0.163666666666667 -0.337333333333333 0.44043169063585 0.00390228320102254 -0.832267585135547 -4.81043053625029 Q8TCB7 METTL6 Q8TCB7.S274.p_METTL6 Q8TCB7_S274s _1_1_274_274 Q8TCB7 Q8TCB7|B4DDX3 Methyltransferase-like protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24637.24637.4 14.49 14.49 99 1 1 1 0 736.4478 2862.7991 S274s TMT10 266 (K) FLKPPKNPsPVVLGLDPK (S) FLKPPKNPS(1.0)PVVLGLDPK K:TMT10,s:Phosphorylated S METTL6 33649.8 2 1 6038.1 14.49 HUMAN 1 -3.5612 -24.0868 LKPPSRPSPDSSESD-p Q8NBF6;S323-p LKPPSRPSPDSSESD 0.228642040116318 0.014808098748328 -0.239 0.359333333333333 12.3163030836726 25.3305449389634 -0.239 0.359333333333333 0.0586637324965553 0.00293052550911859 -2.38856686490821 5.12148105404905 Q8NBF6 AVL9 Q8NBF6.S323.p_AVL9 Q8NBF6_S323s _1_1_323_323 Q8NBF6 Q8NBF6|B8ZZW5|Q8NBF6-2|A0A1W2PRP5 Late secretory pathway protein AVL9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25550.25550.5 27.05 27.05 1.119 9 1 1 0 1050.7146 5169.5744 S323s TMT10 306 (K) GQEPNDTNQYLKPPSRPsPDSSESDWETLDPSVLEDPNLK (E) GQEPNDT(0.0)NQY(0.0)LKPPS(0.0)RPS(0.99)PDS(0.0)S(0.0)ES(0.0)DWET(0.0)LDPS(0.0)VLEDPNLK K:TMT10,s:Phosphorylated S AVL9 72288.4 3 2 3222.1 56.92 HUMAN 1 -12.3163 25.3305 LKQHKTLSQELVNLR-p Q9ULD2;S958-p LKQHKTLSQELVNLR 0.463367602126208 0.739888155609767 -0.155 0.0333333333333333 6.16428204598992 1.8041559035395 -0.155 0.0333333333333333 0.241864314292242 0.660061511611746 -1.31377673520838 0.464928388145087 Q9ULD2 MTUS1 Q9ULD2.S958.p_MTUS1 Q9ULD2_S958s _1_1_958_958 Q9ULD2 Q9ULD2|Q9ULD2-2|Q9ULD2-6|Q9ULD2-3|Q9ULD2-7|Q9ULD2-4 Microtubule-associated tumor suppressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.31062.31062.3 11.07 11.07 2.261 6 1 1 0 996.5216 2907.5861 S958s TMT10 956 (K) TLsQELVNLRGELVTASTTCEK (L) T(0.0)LS(0.99)QELVNLRGELVT(0.0)AS(0.0)T(0.0)T(0.0)CEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTUS1 142763.7 5 8 645.1 254.81 HUMAN 1 -6.1643 1.8042 LKQHYGGSPDHKHGG-p Q96PX6;S369-p LKQHYGGSPDHKHGG 0.295019037798013 0.0428273624475492 -0.330666666666667 -0.247333333333333 9.99942156784934 18.332980305727 -0.330666666666667 -0.247333333333333 0.100013319779478 0.0146791858636654 -1.98160995921871 -3.52701527460249 Q96PX6 CCDC85A Q96PX6.S369.p_CCDC85A Q96PX6_S369s _1_1_369_369 Q96PX6 Q96PX6 Coiled-coil domain-containing protein 85A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3509.3509.3 16.78 16.78 11.301 2 1 1 0 555.2703 1583.8331 S369s TMT10 364 (K) QHYGGsPDHK (H) QHY(0.0)GGS(0.99)PDHK K:TMT10,s:Phosphorylated S CCDC85A 60659.2 2 7 1994.1 103.61 HUMAN 1 -9.9994 -18.333 LKQNFSKSWHDMQTT-p J3KNE7;S86-p LKQNFSKSWHDMQTT 0.167043422870752 0.0250777767069085 -0.413333333333333 -0.445333333333333 15.5431233471703 21.7805784133885 -0.413333333333333 -0.445333333333333 0.0279053622920052 0.00663654675930048 -2.98094866842522 -4.26747794954234 J3KNE7 NotFound J3KNE7.S86.p_NotFound J3KNE7_S86s _1_1_86_86 J3KNE7 J3KNE7|Q16890|E9PPQ1|Q16890-5|E9PNK6|Q16890-2|Q16890-3|Q16890-4 Tumor protein D53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14104.14104.3 15.55 15.55 6.757 5 1 1 0 669.6537 1926.9784 S86s TMT10 86 (K) sWHDMQTTTAYK (K) S(0.99)WHDMQT(0.0)T(0.0)T(0.0)AY(0.0)K K:TMT10,s:Phosphorylated S TPD52L1 23056.4 6 2 793.3 224.4 HUMAN 1 -15.5431 -21.7806 LKQNLRLTGPAAAEP-p Q8N2K0-2;T43-p LKQNLRLTGPAAAEP 0.137689822550301 0.0286107106633554 0.252333333333333 -0.315666666666667 17.6305919096467 20.9012809772514 0.252333333333333 -0.315666666666667 0.0172560268971878 0.00812590802351848 3.38788629574676 -4.07107005018976 Q8N2K0 ABHD12 Q8N2K0.2.T43.p_ABHD12 Q8N2K0-2_T43t _1_1_43_43 Q8N2K0-2 Q8N2K0-2|I3L380 Isoform 2 of Monoacylglycerol lipase ABHD12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11251.11251.3 11.23 6.78 99 1 1 1 0 601.6537 1722.9812 T43t TMT10 38 (K) QNLRLtGPAAAEPR (C) QNLRLT(1.0)GPAAAEPR t:Phosphorylated T ABHD12 46013.9 1 1 6517.1 11.23 HUMAN 1 17.6306 -20.9013 LKQNLSRSWHDVQVS-p O43399;S96-p LKQNLSRSWHDVQVS 0.46456903942077 0.0289699176056523 -0.140333333333333 -0.298 6.14341188337415 20.8233772368202 -0.140333333333333 -0.298 0.243029398305527 0.008272985750967 -1.31007123240224 -4.05393235931191 O43399 TPD52L2 O43399.S96.p_TPD52L2 O43399_S96s _1_1_96_96 O43399 O43399-7|A0A087WYR3|O43399-5 Tumor protein D54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17959.17959.3 18.23 18.23 11.581 4 1 1 0 682.0146 1964.0642 S96s TMT10 96 (R) sWHDVQVSSAYVK (T) S(0.99)WHDVQVS(0.0)S(0.0)AY(0.0)VK K:TMT10,s:Phosphorylated S TPD52L2 22294.4 8 8 793.2 224.4 HUMAN 1 -6.1434 -20.8234 LKQNTAGSPKTCDRK-p Q8TEW0;S187-p LKQNTAGSPKTCDRK 0.178168547547072 0.0203209027729737 2.42133333333333 -1.5675 14.7997204372842 23.1691784380987 2.42133333333333 -1.5675 0.0331152437639953 0.00482038977094136 2.84097229500107 -5.2302814717632 Q8TEW0 PARD3 Q8TEW0.S187.p_PARD3 Q8TEW0_S187s _1_1_187_187 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11|Q8TEW0-4|Q8TEW0-6 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3532.3532.3 12.45 7.26 2.825 3 1 1 0 624.973 1792.9376 S187s TMT10 182 (K) QNTAGsPKTCDR (K) QNT(0.0)AGS(0.99)PKT(0.0)CDR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PARD3 151933.9 1 5 65.1 692.2 HUMAN 1 14.7997 -23.1692 LKQQLLESPAHQKSP-p Q5T5Y3-3;S217-p LKQQLLESPAHQKSP 0.144022894602826 0.0191882980304254 -0.281 -0.654666666666667 17.1828577169892 23.604542778828 -0.281 -0.654666666666667 0.0191299673281358 0.00436059469517358 -3.29873740481391 -4.6933764578246 Q5T5Y3 CAMSAP1 Q5T5Y3.3.S217.p_CAMSAP1 Q5T5Y3-3_S217s _1_1_217_217 Q5T5Y3-3 Q5T5Y3-3 Isoform 3 of Calmodulin-regulated spectrin-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10275.10275.3 12.56 12.56 99 1 1 1 0 606.3295 1737.0059 S217s TMT10 212 (K) QQLLEsPAHQK (S) QQLLES(1.0)PAHQK K:TMT10,s:Phosphorylated S CAMSAP1 180710.7 1 1 220.1 428.42 HUMAN 1 -17.1829 -23.6045 LKQQSQTSIGQVIQE-p Q8WYA0;S661-p LKQQSQTSIGQVIQE 0.538254677344084 0.946207902390305 0.118 0.00900000000000001 4.97238588608425 0.343776630830995 0.118 0.009 0.31824486977289 0.923894404655256 1.0989952222808 0.100057282558814 Q8WYA0 IFT81 Q8WYA0.S661.p_IFT81 Q8WYA0_S661s _1_1_661_661 Q8WYA0 Q8WYA0|Q8WYA0-4 Intraflagellar transport protein 81 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28606.28606.3 7.32 7.32 1.137 3 1 1 0 870.1097 2528.3518 S661s TMT10 656 (K) QQSQTsIGQVIQEGGEDRLIL (-) QQS(0.0)QT(0.0)S(0.99)IGQVIQEGGEDRLIL s:Phosphorylated S IFT81 80086.6 1 3 4327.1 33.47 HUMAN 1 4.9724 0.3438 LKQRINFSDLDQRSI-p E7ETA6;S110-p LKQRINFSDLDQRSI 0.32859709424709 0.0090396054976354 0.319666666666667 -0.480666666666667 9.03940920028316 28.9197884338455 0.319666666666667 -0.480666666666667 0.124755321567512 0.00128239305279314 1.81518513425366 -6.10086679519159 E7ETA6 PCM1 E7ETA6.S110.p_PCM1 E7ETA6_S110s _1_1_110_110 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6|Q15154-3|E9PGW9 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21203.21203.2 12.11 5.31 99 1 1 1 0 708.838 1336.7058 S110s TMT10 107 (R) INFsDLDQR (S) INFS(1.0)DLDQR s:Phosphorylated S PCM1 229381.8 2 5 13.1 1159.95 HUMAN 1 9.0394 -28.9198 LKQVAYIYKCVNTTL-p Q01518;Y354-p LKQVAYIYKCVNTTL 0.108274227113564 0.920295532710217 0.360666666666667 0.018 20.2587355321844 0.508339618295426 0.360666666666667 0.0180000000000001 0.00942163871819454 0.889541139569998 3.93469913346933 0.145541341619225 Q01518 CAP1 Q01518.Y354.p_CAP1 Q01518_Y354y _1_1_354_354 Q01518 Q01518 Adenylyl cyclase-associated protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.18151.18151.2 10.8 10.8 5.204 2 1 1 0 711.8914 1342.8135 Y354y TMT10 349 (K) QVAYIyK (C) QVAY(0.0)IY(0.99)K K:TMT10,y:Phosphorylated Y CAP1 52357 1 1 325.1 10.8 HUMAN 1 20.2587 0.5083 LKQVQQNSLHRDSLV-p Q15811;S559-p LKQVQQNSLHRDSLV 0.264726642977841 0.250578435622036 0.485333333333333 0.497 10.9472889931833 7.91880794142667 0.485333333333333 0.497 0.0804027865801957 0.16148017294133 2.14687734119079 1.62056455983242 Q15811 ITSN1 Q15811.S559.p_ITSN1 Q15811_S559s _1_1_559_559 Q15811 Q15811|Q15811-8|Q15811-9|Q15811-4|Q15811-2 Intersectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3974.3974.2 14.21 5.81 99 1 1 1 0 709.8594 1338.744 S559s TMT10 554 (K) QVQQNsLHR (D) QVQQNS(1.0)LHR s:Phosphorylated S ITSN1 196273.9 2 3 790.1 224.94 HUMAN 1 10.9473 7.9188 LKRAAKNSVDLDDYE-p O75151;S853-p LKRAAKNSVDLDDYE 0.407362201994798 0.00575422933881225 -0.241333333333333 0.507333333333333 7.20170796984144 32.4078334963242 -0.241333333333333 0.507333333333333 0.190471149601599 0.000574402935044068 -1.49627698865925 7.18689452702069 O75151 PHF2 O75151.S853.p_PHF2 O75151_S853s _1_1_853_853 O75151 O75151|A0A087WW48 Lysine-specific demethylase PHF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18852.18852.4 18.97 18.97 7.019 2 1 1 0 813.3749 3170.4988 S853s Hydrogen 849 (R) AAKNsVDLDDYEEEQDHLDACFK (D) AAKNS(0.99)VDLDDY(0.0)EEEQDHLDACFK K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S PHF2 121742.7 2 8 376.2 336.84 HUMAN 1 -7.2017 32.4078 LKRAQEQSPRKRGRP-p Q49A26;S167-p LKRAQEQSPRKRGRP 0.203067766199695 0.899835315667745 -0.608666666666667 0.0173333333333333 13.4204387262162 0.640901888264664 -0.608666666666667 0.0173333333333333 0.0454942099375483 0.862799353821834 -2.58711094382132 0.181189626024152 Q49A26 GLYR1 Q49A26.S167.p_GLYR1 Q49A26_S167s _1_1_167_167 Q49A26 Q49A26|Q49A26-3|Q49A26-2|Q49A26-4 Putative oxidoreductase GLYR1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3036.3036.4 9.37 5.36 99 1 1 1 0 410.2282 1557.9225 S167s TMT10 162 (K) RAQEQsPRK (R) RAQEQS(1.0)PRK K:TMT10,s:Phosphorylated S GLYR1 61125.9 1 5 2303.1 88.97 HUMAN 1 -13.4204 0.6409 LKRDRSFSEHDLAQL-p Q8WWL2;S442-p LKRDRSFSEHDLAQL 0.486462517603337 0.116538100282722 -0.109333333333333 -0.222666666666667 5.76402937134895 12.3148239283246 -0.109333333333333 -0.222666666666667 0.26521437689909 0.0586837160689557 -1.24241099632428 -2.3870752845161 Q8WWL2 SPIRE2 Q8WWL2.S442.p_SPIRE2 Q8WWL2_S442s _1_1_442_442 Q8WWL2 Q8WWL2|Q8WWL2-2|Q8WWL2-3|Q8WWL2-4 Protein spire homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15447.15447.2 14.19 8.24 2.839 2 1 1 0 806.3898 1531.8066 S442s TMT10 440 (R) SFsEHDLAQLR (S) S(0.0)FS(0.99)EHDLAQLR s:Phosphorylated S SPIRE2 80924.6 3 4 1538.1 133.27 HUMAN 1 -5.764 -12.3148 LKRERSMSENAVRQN-p Q9GZY8-4;S131-p LKRERSMSENAVRQN 0.0217780195589434 0.00607408770386904 -0.725333333333333 -0.485666666666667 38.5758403224843 31.9862031446341 -0.725333333333333 -0.485666666666667 0.00013880847014874 0.000632964984414169 -9.52988417919882 -7.04778709341024 Q9GZY8 MFF Q9GZY8.4.S131.p_MFF Q9GZY8-4_S131s _1_1_131_131 Q9GZY8-4 Q9GZY8|Q9GZY8-2|Q9GZY8-3|Q9GZY8-5|A0A0A0MS29|Q9GZY8-4 Isoform 4 of Mitochondrial fission factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6572.6572.2 11.9 6.08 2.126 2 1 1 0 601.7759 1122.5775 S131s TMT10 129 (R) SMsENAVR (Q) S(0.0)MS(0.99)ENAVR s:Phosphorylated S MFF 25066.2 1 8 1266.1 160.29 HUMAN 1 -38.5758 -31.9862 LKRLHFDSPPHLLDI-p Q8TC44;S321-p LKRLHFDSPPHLLDI 0.739247480976757 0.0371133208793119 -0.076 0.381666666666667 2.48695461716551 19.2325117709069 -0.076 0.381666666666667 0.564033031424343 0.0119329775318808 -0.614131460795956 3.71283534168596 Q8TC44 POC1B Q8TC44.S321.p_POC1B Q8TC44_S321s _1_1_321_321 Q8TC44 Q8TC44|Q8TC44-2|Q8IU52 POC1 centriolar protein homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21476.21476.4 19.16 19.16 11.908 2 1 1 0 572.0515 2205.213 S321s TMT10 316 (K) RLHFDsPPHLLDIYPR (T) RLHFDS(0.99)PPHLLDIY(0.0)PR s:Phosphorylated S POC1B 54237.4 1 3 2658.1 74.93 HUMAN 1 -2.487 19.2325 LKRLRGASVIIRFVT-p Q9H0R4;S39-p LKRLRGASVIIRFVT 0.152381872383781 0.151599623930871 -0.247 0.273333333333333 16.4353725577054 10.7729548368388 -0.247 0.273333333333333 0.0227228469991687 0.0836959640838427 -3.15223913432325 2.11544766703787 Q9H0R4 HDHD2 Q9H0R4.S39.p_HDHD2 Q9H0R4_S39s _1_1_39_39 Q9H0R4 Q9H0R4 Haloacid dehalogenase-like hydrolase domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13429.13429.2 10.54 2.89 99 1 1 1 0 512.79 944.609 S39s TMT10 37 (R) GAsVIIR (F) GAS(1.0)VIIR s:Phosphorylated S HDHD2 28763.6 1 1 5877.1 15.67 HUMAN 1 -16.4354 10.773 LKRNRYLSFHFKSGS-p P53004;S230-p LKRNRYLSFHFKSGS 0.403134583733992 0.27333033151974 0.338333333333333 -0.5 7.28526110969131 7.41995700394106 0.338333333333333 -0.5 0.186841733953083 0.181135802535284 1.51086005213086 -1.5338929217239 P53004 BLVRA P53004.S230.p_BLVRA P53004_S230s _1_1_230_230 P53004 P53004 Biliverdin reductase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20511.20511.2 12.5 6.6 2.881 2 1 1 0 625.813 1170.6509 S230s Hydrogen 228 (R) YLsFHFK (S) Y(0.0)LS(0.99)FHFK K:TMT10-Lys-Only,s:Phosphorylated S BLVRA 33713.1 3 1 4885.1 25.47 HUMAN 1 7.2853 -7.42 LKRPLGNSPGERLNR-p P17036;S143-p LKRPLGNSPGERLNR 0.460738850194915 0.696942621866761 -0.149 0.038 6.2059882069901 2.15588310072856 -0.149 0.038 0.239552760202458 0.608711756840389 -1.32117688089919 0.542988375548509 P17036 ZNF3 P17036.S143.p_ZNF3 P17036_S143s _1_1_143_143 P17036 P17036 Zinc finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4116.4116.3 9.11 3.72 99 1 1 1 0 464.5719 1311.7331 S143s TMT10 138 (K) RPLGNsPGER (L) RPLGNS(1.0)PGER s:Phosphorylated S ZNF3 51884.9 1 1 6847.1 9.11 HUMAN 1 -6.206 2.1559 LKRRLSYSDSDLKRA-p A0A087WTF0;S448-p LKRRLSYSDSDLKRA 0.659458835320448 0.0264579096715966 -0.084 -0.290333333333333 3.39249984838533 21.4153269994782 -0.084 -0.290333333333333 0.457878250921979 0.00721883807073774 -0.799065716052741 -4.18521987784105 A0A087WTF0 PTPDC1 A0A087WTF0.S448.p_PTPDC1 A0A087WTF0_S448s _1_1_448_448 A0A087WTF0 A0A087WTF0|A2A3K4-2 Protein tyrosine phosphatase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12430.12430.2 9.83 9.83 1.534 4 1 1 0 668.8158 1256.6572 S448s Hydrogen 445 (R) LSYsDSDLK (R) LS(0.0)Y(0.0)S(0.99)DS(0.0)DLK K:TMT10-Lys-Only,s:Phosphorylated S PTPDC1 91341.7 4 1 4346.1 33.09 HUMAN 1 -3.3925 -21.4153 LKRRNVSSFPDDATS-p P52292;S55-p LKRRNVSSFPDDATS 0.255903152682223 0.00876117195249559 -0.177 -0.532666666666667 11.2468150261076 29.1755897137182 -0.177 -0.532666666666667 0.0750444358960729 0.00120904100022787 -2.19940695489463 -6.17572743093366 P52292 KPNA2 P52292.S55.p_KPNA2 P52292_S55s _1_1_55_55 P52292 P52292 Importin subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26534.26534.3 14.62 14.62 1.11 6 1 1 0 1362.3259 4004.999 S55s TMT10 52 (R) NVSsFPDDATSPLQENRNNQGTVNWSVDDIVK (G) NVS(0.0)S(0.99)FPDDAT(0.0)S(0.0)PLQENRNNQGT(0.0)VNWS(0.0)VDDIVK K:TMT10,s:Phosphorylated S KPNA2 58203.2 24 2 1475.1 139.39 HUMAN 1 -11.2468 -29.1756 LKRSRQISPQEFIHE-p Q9NSV4;S175-p LKRSRQISPQEFIHE 0.0708573711125562 0.0183356444772992 -0.39 -0.346333333333333 24.8239178365665 23.9042646543667 -0.39 -0.346333333333333 0.0032931250032339 0.00406980437736225 -4.99931837276698 -4.765895799446 Q9NSV4 DIAPH3 Q9NSV4.S175.p_DIAPH3 Q9NSV4_S175s _1_1_175_175 Q9NSV4 Q9NSV4|Q9NSV4-4|Q9NSV4-5|Q9NSV4-6|Q9NSV4-7 Protein diaphanous homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27775.27775.3 16.3 16.3 99 1 1 1 0 669.6972 1927.1053 S175s TMT10 173 (R) QIsPQEFIHELK (M) QIS(1.0)PQEFIHELK K:TMT10,s:Phosphorylated S DIAPH3 138235.7 1 1 3853.1 41.68 HUMAN 1 -24.8239 -23.9043 LKRSVSLTPPMNVPN-p Q9UPU9;T256-p LKRSVSLTPPMNVPN 0.681920528763249 0.645138704594576 0.0626666666666667 0.0441666666666667 3.11779174344467 2.59498252376226 0.0626666666666667 0.0441666666666667 0.487776446681635 0.550176134443882 0.744237247315061 0.636793076999979 Q9UPU9 SAMD4A Q9UPU9.T256.p_SAMD4A Q9UPU9_T256tS272s_2_2_256_272 Q9UPU9 Q9UPU9|Q9UPU9-2 Protein Smaug homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25124.25124.4 11.33 11.33 2.397 4 2 2 0 822.8782 3128.5607 T256t S272s TMT10 252 (R) SVSLtPPMNVPNQPLGHGWMsHEDLR (A) S(0.0)VS(0.0)LT(0.99)PPMNVPNQPLGHGWMS(0.99)HEDLR t:Phosphorylated T,s:Phosphorylated S SAMD4A 80097.9 9 10 2441.1 83.32 HUMAN 2 3.1178 2.595 LKRTFDATNPLNLCV-p Q8TD19;T254-p LKRTFDATNPLNLCV 0.0626504963358761 0.988759977836028 -0.558666666666667 0.00333333333333339 26.1678566522565 0.0747087262537205 -0.558666666666667 0.00333333333333339 0.0024166532166843 0.982944795185093 -5.34577086821548 0.0223807607972967 Q8TD19 NEK9 Q8TD19.T254.p_NEK9 Q8TD19_T254t _1_1_254_254 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25541.25541.2 14.94 14.94 3.36 2 1 1 0 901.4417 1721.9094 T254t Hydrogen 250 (R) TFDAtNPLNLCVK (I) T(0.0)FDAT(0.99)NPLNLCVK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T NEK9 108935.2 7 4 224.1 425.83 HUMAN 1 -26.1679 0.0747 LKRVPSPTPAPKEAV-p Q9UQ35;T2583-p LKRVPSPTPAPKEAV 0.815216209821521 0.334404602648173 0.038 0.14 1.70301588785915 6.30405140676901 0.038 0.14 0.675613643472267 0.234204297222776 0.441979898052702 1.33821864472656 Q9UQ35 SRRM2 Q9UQ35.T2583.p_SRRM2 Q9UQ35_T2583t _1_1_2583_2583 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9113.9113.3 12.76 9.11 1.138 2 1 1 0 529.9728 1507.9361 T2583t TMT10 2578 (K) RVPSPtPAPK (E) RVPS(0.0)PT(0.99)PAPK K:TMT10,t:Phosphorylated T SRRM2 300351.7 4 161 2.1 3310.34 HUMAN 1 1.703 6.3041 LKSELPDSPEPVTEI-p Q86YC2;S209-p LKSELPDSPEPVTEI 0.452047636804205 0.816507421468261 -0.11 -0.03 6.36195201141778 1.23186207158307 -0.11 -0.03 0.231102582630512 0.753032625875322 -1.34879583476659 -0.331034601391042 Q86YC2 PALB2 Q86YC2.S209.p_PALB2 Q86YC2_S209s _1_1_209_209 Q86YC2 Q86YC2 Partner and localizer of BRCA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28347.28347.4 22.5 17.45 1.543 5 1 1 0 893.2034 3489.8252 S209s TMT10 204 (K) SELPDsPEPVTEINEDSVLIPPTAQPEK (G) S(0.0)ELPDS(0.99)PEPVT(0.0)EINEDS(0.0)VLIPPT(0.0)AQPEK K:TMT10,s:Phosphorylated S PALB2 133061.7 6 3 934.1 198.86 HUMAN 1 -6.362 -1.2319 LKSGGRRSGNGNKPP-p P51153;S178-p LKSGGRRSGNGNKPP 0.146674740935683 0.0233032786004956 -0.25 -0.301333333333333 16.9413866859346 22.2806003668286 -0.25 -0.301333333333333 0.0202237333938136 0.00591479862601119 -3.25109930034354 -4.38168222025318 P51153 RAB13 P51153.S178.p_RAB13 P51153_S178s_1_1_178_178 P51153 P51153|A0A087WWB9 Ras-related protein Rab-13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8104.8326.3 15.69 10.68 3.747 3 1 1 0 618.6522 1772.9907 S178s N180n Hydrogen 178 (R) sGnGNKPPSTDLK (T) S(0.99)GN(0.99)GN(0.0)KPPS(0.0)T(0.0)DLK K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated RAB13 23001.9 28 4 2008.3 102.72 HUMAN 1 -16.9414 -22.2806 LKSGKTNSVESLPEL-p Q9P2D0;S1018-p LKSGKTNSVESLPEL 0.234983357810473 0.53649069523891 0.191333333333333 0.0613333333333333 12.0534075079553 3.63886964080993 0.191333333333333 0.0613333333333333 0.0623245640264629 0.432626418146588 2.34181116158529 0.847303250033869 Q9P2D0 IBTK Q9P2D0.S1018.p_IBTK Q9P2D0_S1018sS1021s_2_2_1018_1021 Q9P2D0 Q9P2D0|Q9P2D0-2|E9PDR5 Inhibitor of Bruton tyrosine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26049.26049.3 7.95 7.95 1.178 10 2 2 0 1181.5623 3382.7378 S1018s S1021s TMT10 1013 (K) SGKTNsVEsLPELLTSDSEGSYAGVGSPR (D) S(0.0)GKT(0.0)NS(0.99)VES(0.99)LPELLT(0.0)S(0.0)DS(0.0)EGS(0.0)Y(0.0)AGVGS(0.0)PR K:TMT10,s:Phosphorylated S IBTK 152465 4 12 907.1 202.21 HUMAN 1 12.0534 3.6389 LKSIVKNSASKSHAA-p O60934;S535-p LKSIVKNSASKSHAA 0.387041482456231 0.00222682980082593 -0.121 -0.753 7.62756597967913 41.136269297141 -0.121 -0.753 0.172680541565234 7.69791427254803e-05 -1.57047833831624 -10.6544370641768 O60934 NBN O60934.S535.p_NBN O60934_S535s _1_1_535_535 O60934 O60934|A0A0C4DG07 Nibrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8683.8683.2 10.03 10.03 10.03 3 1 1 0 850.999 1621.0252 S535s TMT10 530 (K) SIVKNsASK (S) S(0.0)IVKNS(0.99)AS(0.0)K K:TMT10,s:Phosphorylated S NBN 85642.2 1 11 562.1 271.59 HUMAN 1 -7.6276 -41.1363 LKSLAFDSEHSADEK-p Q96L73;S483-p LKSLAFDSEHSADEK 0.172012241579796 0.574806221157771 -0.442 -0.0626666666666666 15.2231343733093 3.24263997999554 -0.442 -0.0626666666666666 0.0300390755159074 0.473953791660032 -2.92040592319569 -0.769165618896383 Q96L73 NSD1 Q96L73.S483.p_NSD1 Q96L73_S483sS486s_2_2_483_486 Q96L73 Q96L73|Q96L73-3|Q96L73-2|A0A1W2PS55 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15118.15118.3 12.93 12.93 6.971 3 2 2 0 685.3026 1893.9594 S483s S486s TMT10 478 (K) SLAFDsEHsADEK (E) S(0.0)LAFDS(0.99)EHS(0.99)ADEK K:TMT10,s:Phosphorylated S NSD1 302295.2 2 14 601.1 263.26 HUMAN 1 -15.2231 -3.2426 LKSLDIYSFIKEANT-p Q9NR50;S265-p LKSLDIYSFIKEANT 0.84768925371821 0.0470561265791301 -0.03 0.246333333333333 1.38923851872315 17.7584874611656 -0.03 0.246333333333333 0.726233282232256 0.0167552631824478 -0.368853460254392 3.41080648274269 Q9NR50 EIF2B3 Q9NR50.S265.p_EIF2B3 Q9NR50_S265s _1_1_265_265 Q9NR50 Q9NR50|Q9NR50-2 Translation initiation factor eIF-2B subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33272.33272.2 13.14 13.14 6.365 3 1 1 0 812.4449 1543.9136 S265s TMT10 260 (K) SLDIYsFIK (E) S(0.0)LDIY(0.0)S(0.99)FIK K:TMT10,s:Phosphorylated S EIF2B3 50981.1 1 2 6209.1 13.14 HUMAN 1 -1.3892 17.7585 LKSLLGDSAPTLHLN-p P52594-4;S167-p LKSLLGDSAPTLHLN 0.717919749748155 0.0955923433701338 -0.076 0.184333333333333 2.71666928809636 13.4831404699932 -0.076 0.184333333333333 0.534974487287365 0.044842101049083 -0.662252736989877 2.59701296853905 P52594 AGFG1 P52594.4.S167.p_AGFG1 P52594-4_S167s _1_1_167_167 P52594-4 P52594-4|P52594-3|B8ZZY2|P52594-2 Isoform 4 of Arf-GAP domain and FG repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21530.21530.4 17.95 17.95 5.589 3 1 1 0 501.7794 1924.1268 S167s TMT10 162 (K) SLLGDsAPTLHLNK (G) S(0.0)LLGDS(0.99)APT(0.0)LHLNK K:TMT10,s:Phosphorylated S AGFG1 61108.2 3 2 2791.1 70.5 HUMAN 1 -2.7167 13.4831 LKSLSLNSPVQPLEN-p Q86W11;S162-p LKSLSLNSPVQPLEN 0.750734889829739 0.0131588910628106 -0.0476666666666667 0.489333333333333 2.37217011037446 26.1944777848582 -0.0476666666666667 0.489333333333333 0.579139236124898 0.00240188506394304 -0.589730658327897 5.3457114060585 Q86W11 ZSCAN30 Q86W11.S162.p_ZSCAN30 Q86W11_S162s _1_1_162_162 Q86W11 Q86W11|Q86W11-3|C9JCM2 Zinc finger and SCAN domain-containing protein 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21281.21281.3 13.78 13.78 4.317 3 1 1 0 784.7407 2272.2371 S162s TMT10 157 (K) SLSLNsPVQPLENQCK (T) S(0.0)LS(0.0)LNS(0.99)PVQPLENQCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZSCAN30 57504.3 1 1 6127.1 13.78 HUMAN 1 -2.3722 26.1945 LKSPELPSPQAEKRL-p Q9H078;S668-p LKSPELPSPQAEKRL 0.988519185963924 0.223872840714642 -0.00233333333333334 0.134 0.10342392013857 8.5609198163992 -0.00233333333333334 0.134 0.976467083704959 0.13928617697744 -0.0308867435487706 1.73176467079649 Q9H078 CLPB Q9H078.S668.p_CLPB Q9H078_S668s _1_1_668_668 Q9H078 Q9H078|Q9H078-2 Caseinolytic peptidase B protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13936.13936.3 7.77 7.77 7.769 2 1 1 0 574.3033 1640.926 S668s TMT10 663 (K) SPELPsPQAEK (R) S(0.0)PELPS(0.99)PQAEK K:TMT10,s:Phosphorylated S CLPB 79240.9 1 1 7092.1 7.77 HUMAN 1 -0.1034 8.5609 LKSPGFASPKIDSVA-p P49790-3;S650-p LKSPGFASPKIDSVA 0.290216881946097 0.857443441311734 -0.584 -0.0256666666666667 10.1239650871447 0.940948768345918 -0.584 -0.0256666666666667 0.0971859515669943 0.805202515843326 -2.00325590199835 -0.258974434519032 P49790 NUP153 P49790.3.S650.p_NUP153 P49790-3_S650s _1_1_650_650 P49790-3 P49790-3 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28840.28840.4 20.79 16.26 1.316 14 1 1 0 1292.4338 5086.7344 S650s TMT10 645 (K) SPGFAsPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLK (A) S(0.0)PGFAS(0.99)PKIDS(0.0)VAAQPT(0.0)AT(0.0)S(0.0)PVVY(0.0)T(0.0)RPAIS(0.0)S(0.0)FS(0.0)S(0.0)S(0.0)GIGFGES(0.0)LK K:TMT10,s:Phosphorylated S NUP153 158989.2 3 27 64.1 696.53 HUMAN 1 -10.124 -0.9409 LKSSVLPSPSAGRSA-p P35658-3;S646-p LKSSVLPSPSAGRSA 0.844605466455093 0.0263513727995733 -0.033 -0.340666666666667 1.41683620233112 21.4621806041674 -0.033 -0.340666666666667 0.721632991125267 0.00714137665615802 -0.375399513089313 -4.19571770568748 P35658 NUP214 P35658.3.S646.p_NUP214 P35658-3_S646s _1_1_646_646 P35658-3 P35658-3|P35658-4 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11769.12268.2 7.1 7.1 1.544 4 1 1 0 683.8506 1286.7266 S646s TMT10 641 (K) SSVLPsPSAGR (S) S(0.0)S(0.0)VLPS(0.99)PS(0.0)AGR s:Phosphorylated S NUP214 214428.5 2 9 111.1 572.27 HUMAN 1 -1.4168 -21.4622 LKSSVLPSPSGRSAQ-p P35658-5;S635-p LKSSVLPSPSGRSAQ 0.228823878883514 0.00752314179680432 -0.250333333333333 -0.529 12.3072377172984 30.3543679870664 -0.250333333333333 -0.529 0.058786313758549 0.000921644002469339 -2.38695154359664 -6.53015753168115 P35658 NUP214 P35658.5.S635.p_NUP214 P35658-5_S635s _1_1_635_635 P35658-5 P35658-5|P35658-2|A0A0A0MSW3 Isoform 5 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11453.11453.3 8.3 8.3 2.608 4 1 1 0 432.557 1215.6895 S635s TMT10 630 (K) SSVLPsPSGR (S) S(0.0)S(0.0)VLPS(0.99)PS(0.0)GR s:Phosphorylated S NUP214 216253.3 3 41 111.2 572.27 HUMAN 1 -12.3072 -30.3544 LKSTLAMSPRQRKKM-p Q13522;S67-p LKSTLAMSPRQRKKM 0.902824138970015 0.132566738603968 0.0186666666666667 -0.169666666666667 0.87079297063797 11.5669150824643 0.0186666666666667 -0.169666666666667 0.818315359734413 0.069712152357557 0.241146607857022 -2.25466686655591 Q13522 PPP1R1A Q13522.S67.p_PPP1R1A Q13522_S67s _1_1_67_67 Q13522 Q13522 Protein phosphatase 1 regulatory subunit 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9826.9826.2 10.26 5.21 10.261 3 1 1 0 586.2914 1091.608 S67s TMT10 62 (K) STLAMsPR (Q) S(0.0)T(0.0)LAMS(0.99)PR s:Phosphorylated S PPP1R1A 19068 2 2 5667.1 17.36 HUMAN 1 0.8708 -11.5669 LKTELEDTLDSTAAQ-p P35579;T1151-p LKTELEDTLDSTAAQ 0.497896621454702 0.00165031614303791 -0.092 -1.03733333333333 5.58039364105475 44.3032414296722 -0.092 -1.03733333333333 0.276669086339301 3.71258031008989e-05 -1.20943546935736 -12.2471863864378 P35579 MYH9 P35579.T1151.p_MYH9 P35579_T1151t _1_1_1151_1151 P35579 P35579 Myosin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36594.36594.4 22.97 22.97 2.981 4 1 1 0 889.6988 3475.8056 T1151t TMT10 1136 (R) DLGEELEALKTELEDtLDSTAAQQELR (S) DLGEELEALKT(0.0)ELEDT(0.99)LDS(0.0)T(0.0)AAQQELR K:TMT10,t:Phosphorylated T MYH9 227783.5 1 27 296.1 379.15 HUMAN 1 -5.5804 -44.3032 LKTFMEITLEEDSIE-p Q86XI2-2;T1119-p LKTFMEITLEEDSIE 0.367571861538115 0.684579985552986 0.133333333333333 -0.071 8.06645336374135 2.25352270433744 0.133333333333333 -0.071 0.156082662091815 0.595179178417222 1.64668657315149 -0.564173539827772 Q86XI2 NCAPG2 Q86XI2.2.T1119.p_NCAPG2 Q86XI2-2_T1119t _1_1_1119_1119 Q86XI2-2 Q86XI2-2 Isoform 2 of Condensin-2 complex subunit G2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27301.27301.3 13.72 13.72 6.759 3 1 1 0 674.6501 1941.9677 T1119t TMT10 1114 (K) TFMEItLEEDSIER (Y) T(0.0)FMEIT(0.99)LEEDS(0.0)IER t:Phosphorylated T NCAPG2 134019.1 1 1 6133.1 13.72 HUMAN 1 8.0665 -2.2535 LKTKIVDSPEKLKNY-p E9PQC4;S247-p LKTKIVDSPEKLKNY 0.172561349117344 0.00735534388709246 0.539666666666667 -0.821333333333333 15.1946114639945 30.5143530704644 0.539666666666667 -0.821333333333333 0.0302370106996145 0.000888310290080416 2.91503103758761 -6.57949090475751 E9PQC4 NotFound E9PQC4.S247.p_NotFound E9PQC4_S247s _1_1_247_247 E9PQC4 Q9BZD4|E9PQC4 Kinetochore protein Nuf2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13574.13574.3 13.84 13.84 5.423 2 1 1 0 752.1237 2174.393 S247s TMT10 242 (K) TKIVDsPEKLK (N) T(0.0)KIVDS(0.99)PEKLK K:TMT10,s:Phosphorylated S NUF2 49059.8 15 1 3367.1 52.79 HUMAN 1 15.1946 -30.5144 LKTQGAGSPRSSPSH-p Q9Y4J8-15;S500-p LKTQGAGSPRSSPSH 0.233156511585054 0.032240605024603 0.252666666666667 0.385333333333333 12.1487713930752 20.1277394164477 0.252666666666667 0.385333333333333 0.0609709357914262 0.00971015267231479 2.35875057995462 3.90273664376204 Q9Y4J8 DTNA Q9Y4J8.15.S500.p_DTNA Q9Y4J8-15_S500s _1_1_500_500 Q9Y4J8-15 Q9Y4J8|Q9Y4J8-15 Isoform 15 of Dystrobrevin alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3547.3547.2 10.82 4.73 6.341 2 1 1 0 541.7639 1002.553 S500s TMT10 495 (K) TQGAGsPR (S) T(0.0)QGAGS(0.99)PR s:Phosphorylated S DTNA 83008.6 1 17 792.1 224.62 HUMAN 1 12.1488 20.1277 LKTQRRKSLPARDGG-p Q8NCE2;S415-p LKTQRRKSLPARDGG 0.321295358159683 0.0600984255283445 -0.149666666666667 0.410666666666667 9.23127707080416 16.2694695344117 -0.149666666666667 0.410666666666667 0.119363705621371 0.0236076656955177 -1.84840567836255 3.11785452491626 Q8NCE2 MTMR14 Q8NCE2.S415.p_MTMR14 Q8NCE2_S415s _1_1_415_415 Q8NCE2 Q8NCE2|Q8NCE2-2|Q8NCE2-3|C9JSR1 Myotubularin-related protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27259.27259.3 18.95 12.95 4.572 2 1 1 0 787.3826 2280.1678 S415s TMT10 415 (K) sLPARDGGFTLEDICMLR (R) S(0.99)LPARDGGFT(0.0)LEDICMLR C:Carbamidomethylation,s:Phosphorylated S MTMR14 73057.9 9 1 1808.1 113.5 HUMAN 1 -9.2313 16.2695 LKTSEVYSDDEEEEE-p Q92541;S313-p LKTSEVYSDDEEEEE 0.0530637440823008 0.605182791325328 -0.630333333333333 -0.049 27.6990066156137 2.96020539009026 -0.630333333333334 -0.049 0.00169863214500602 0.505800740696099 -5.76146254828948 -0.712218706917621 Q92541 RTF1 Q92541.S313.p_RTF1 Q92541_S313s _1_1_313_313 Q92541 Q92541 RNA polymerase-associated protein RTF1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10576.10576.4 19.74 19.74 4.151 6 1 1 0 780.1001 3037.41 S313s TMT10 308 (K) TSEVYsDDEEEEEDDKSSEK (S) T(0.0)S(0.0)EVY(0.0)S(0.99)DDEEEEEDDKS(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S RTF1 80540.3 3 2 1718.1 119.59 HUMAN 1 -27.699 -2.9602 LKTSKAETPTESVSE-p P18858;T195-p LKTSKAETPTESVSE 0.717972543127974 0.0184728667941788 -0.054 -0.418666666666667 2.71610742696964 23.8544192365221 -0.054 -0.418666666666667 0.535043703182377 0.00411678395617078 -0.662136137067237 -4.75378382461313 P18858 LIG1 P18858.T195.p_LIG1 P18858_T195t _1_1_195_195 P18858 P18858|P18858-3|P18858-2|M0R0Q7|B4E135 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18183.18183.4 19.06 15.1 1.957 6 1 1 0 1041.7762 4084.1177 T195t TMT10 193 (K) AEtPTESVSEPEVATKQELQEEEEQTKPPR (R) AET(0.99)PT(0.0)ES(0.0)VS(0.0)EPEVAT(0.0)KQELQEEEEQT(0.0)KPPR K:TMT10,t:Phosphorylated T LIG1 102361.8 4 10 302.1 376.44 HUMAN 1 -2.7161 -23.8544 LKVLNWDSRTLVRLQ-p Q13637;S71-p LKVLNWDSRTLVRLQ 0.922345826324192 0.294739594147816 -0.0206666666666667 0.153666666666667 0.687766530171344 7.00524035778757 -0.0206666666666667 0.153666666666667 0.853538955281352 0.199285620962985 -0.19361337474712 1.4615263896173 Q13637 RAB32 Q13637.S71.p_RAB32 Q13637_S71s _1_1_71_71 Q13637 Q13637 Ras-related protein Rab-32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20158.20158.3 11.36 11.36 2.386 2 1 1 0 556.6333 1587.9168 S71s TMT10 66 (K) VLNWDsRTLVR (L) VLNWDS(0.99)RT(0.0)LVR s:Phosphorylated S RAB32 25225 2 1 5426.1 19.44 HUMAN 1 -0.6878 7.0052 LKVMLADSPREESNK-p Q8IUH3;S464-p LKVMLADSPREESNK 0.282502869387563 0.0727001408909633 -0.203666666666667 -0.259 10.3776352547988 15.1303401941911 -0.203666666666667 -0.259 0.0916719510503793 0.0306878159331242 -2.04740183548761 -2.90101927226472 Q8IUH3 RBM45 Q8IUH3.S464.p_RBM45 Q8IUH3_S464s _1_1_464_464 Q8IUH3 Q8IUH3|Q8IUH3-3 RNA-binding protein 45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12336.12336.3 13.41 13.41 13.41 2 1 1 0 672.0081 1934.0417 S464s TMT10 459 (K) VMLADsPREESNK (R) VMLADS(0.99)PREES(0.0)NK K:TMT10,s:Phosphorylated S RBM45 53900.9 3 2 3818.1 42.51 HUMAN 1 -10.3776 -15.1303 LKVYHQQYQDKSREY-p O00459;Y453-p LKVYHQQYQDKSREY 0.405651195639968 0.0335244668360361 -0.195666666666667 -0.284666666666667 7.2360277026422 19.8777327933158 -0.195666666666667 -0.284666666666667 0.188971900031207 0.0102855310759466 -1.50226864949006 -3.84918574148714 O00459 PIK3R2 O00459.Y453.p_PIK3R2 O00459_Y453y _1_1_453_453 O00459 O00459|E9PFP1 Phosphatidylinositol 3-kinase regulatory subunit beta GG20160819_MSz_CCLE_T4D7_pY_Injection_01.7426.7426.3 16.05 16.05 16.047 2 1 1 0 582.9594 1666.8953 Y453y TMT10 448 (K) VYHQQyQDK (S) VY(0.0)HQQY(0.99)QDK K:TMT10,y:Phosphorylated Y PIK3R2 81886.1 2 2 75.1 33.18 HUMAN 1 -7.236 -19.8777 LKYRLVGSQEELASW-p Q13200;S147-p LKYRLVGSQEELASW 0.133350942447308 0.145946791844402 0.285 -0.312333333333333 18.0171155521412 11.0106377032236 0.285 -0.312333333333333 0.0157865941770386 0.0792384970827781 3.46572997067607 -2.156999545251 Q13200 PSMD2 Q13200.S147.p_PSMD2 Q13200_S147s _1_1_147_147 Q13200 Q13200|Q13200-3 26S proteasome non-ATPase regulatory subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21946.21946.3 26.09 26.09 11.072 3 1 1 0 757.0336 2189.1188 S147s TMT10 144 (R) LVGsQEELASWGHEYVR (H) LVGS(0.99)QEELAS(0.0)WGHEY(0.0)VR s:Phosphorylated S PSMD2 100939.6 1 5 539.1 277.07 HUMAN 1 18.0171 -11.0106 LKYSVDPSIVNISDE-p Q9Y6M7-13;S1077-p LKYSVDPSIVNISDE 0.278130997062813 0.918481864685639 0.322 0.0146666666666667 10.51491550974 0.520086832533247 0.322 0.0146666666666667 0.0888195255635764 0.887138274480378 2.07132840588927 0.14873480300062 Q9Y6M7 SLC4A7 Q9Y6M7.13.S1077.p_SLC4A7 Q9Y6M7-13_S1077s _1_1_1077_1077 Q9Y6M7-13 Q9Y6M7-7|Q9Y6M7-8|Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-5 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26700.26700.3 13.16 10.89 2 4 1 1 0 769.3891 2226.1728 S1077s TMT10 1072 (K) YSVDPsIVNISDEMAK (T) Y(0.0)S(0.0)VDPS(0.99)IVNIS(0.0)DEMAK K:TMT10,s:Phosphorylated S SLC4A7 128884.6 1 14 207.1 445.25 HUMAN 1 10.5149 0.5201 LLADHANSPNKKFYQ-p P40939;S756-p LLADHANSPNKKFYQ 0.561762811487617 0.00895144374382652 0.0766666666666667 0.440333333333333 4.6106325585177 29.0147052794139 0.0766666666666667 0.440333333333333 0.345888994739609 0.00125466987927953 1.03219539777159 6.12856081574316 P40939 HADHA P40939.S756.p_HADHA P40939_S756s _1_1_756_756 P40939 P40939 Trifunctional enzyme subunit alpha, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20159.20159.3 22.39 22.39 13.718 2 1 1 0 827.079 2399.2542 S756s TMT10 743 (K) QFTPCQLLADHANsPNK (K) QFT(0.0)PCQLLADHANS(0.99)PNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HADHA 83739.9 8 2 3667.1 45.71 HUMAN 1 4.6106 29.0147 LLAKQPATPTRASES-p O43237;T376-p LLAKQPATPTRASES 0.303423649713577 0.116473287207976 0.469666666666667 -0.492666666666667 9.70191020389098 12.3189040121391 0.469666666666667 -0.492666666666667 0.107104811106869 0.0586286101318415 1.92996541396312 -2.38780149954109 O43237 DYNC1LI2 O43237.T376.p_DYNC1LI2 O43237_T376t _1_1_376_376 O43237 O43237|O43237-2 Cytoplasmic dynein 1 light intermediate chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4366.4366.3 13.21 13.21 2.306 4 1 1 0 593.2997 1697.9132 T376t TMT10 373 (K) QPAtPTRASESPAR (G) QPAT(0.99)PT(0.0)RAS(0.0)ES(0.0)PAR t:Phosphorylated T DYNC1LI2 54383.6 2 5 576.1 267.98 HUMAN 1 9.7019 -12.3189 LLALKSPSKENIASV-p Q6NVY1;S236-p LLALKSPSKENIASV 0.223663787104468 0.00153816434231582 -0.566333333333333 1.07 12.496542725625 45.3124780900467 -0.566333333333333 1.07 0.0562789164705692 2.94274202216759e-05 -2.42072991778896 12.7998524111429 Q6NVY1 HIBCH Q6NVY1.S236.p_HIBCH Q6NVY1_S236s _1_1_236_236 Q6NVY1 Q6NVY1|Q6NVY1-2 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.36185.36185.4 19.3 19.3 1.738 2 1 1 0 632.1124 2445.4605 S236s TMT10 222 (K) LAMLEEDLLALKSPsK (E) LAMLEEDLLALKS(0.0)PS(0.99)K K:TMT10,s:Phosphorylated S HIBCH 43823.8 2 2 4572.1 29.59 HUMAN 1 -12.4965 45.3125 LLALPPASPSAARTK-p Q8WZA9;S466-p LLALPPASPSAARTK 0.177952626351024 0.334226153247755 0.278 0.1 14.8339512176791 6.30766007240552 0.278 0.1 0.0328552577231688 0.234009771619303 2.84736621388016 1.33885706663512 Q8WZA9 IRGQ Q8WZA9.S466.p_IRGQ Q8WZA9_S466s _1_1_466_466 Q8WZA9 Q8WZA9 Immunity-related GTPase family Q protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32750.32750.3 22.59 17.52 1.149 2 1 1 0 821.4645 2382.407 S466s TMT10 449 (R) ALPPAQAGALLLALPPAsPSAAR (T) ALPPAQAGALLLALPPAS(0.99)PS(0.0)AAR s:Phosphorylated S IRGQ 63229.6 2 3 3384.1 52.28 HUMAN 1 14.834 6.3077 LLAPLIATPPRTSQP-p Q9Y2F5;T1642-p LLAPLIATPPRTSQP 0.57602742215752 0.861839640259032 0.0843333333333333 -0.0306666666666666 4.40631845090816 0.910190416756149 0.0843333333333333 -0.0306666666666666 0.362550204898801 0.810925501982147 0.994043666767102 -0.251171948795781 Q9Y2F5 ICE1 Q9Y2F5.T1642.p_ICE1 Q9Y2F5_T1642t _1_1_1642_1642 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34982.34982.4 24.76 20.89 99 1 1 1 0 664.3898 2574.5697 T1642t TMT10 1624 (K) IRQEVGPPLPPLLAPLIAtPPR (T) IRQEVGPPLPPLLAPLIAT(1.0)PPR t:Phosphorylated T ICE1 250910.2 4 16 216.1 433.09 HUMAN 1 4.4063 -0.9102 LLAQEQVSFFEEERN-p O14578-4;S140-p LLAQEQVSFFEEERN 0.759936635556235 0.142683032318194 0.0663333333333333 0.235 2.28658911434905 11.142613121981 0.0663333333333333 0.235 0.590664797584675 0.0768667798642899 0.571373754743929 2.18011536462946 O14578 CIT O14578.4.S140.p_CIT O14578-4_S140s _1_1_140_140 O14578-4 O14578-4|O14578-2 Isoform 4 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26858.26858.3 17.63 17.63 99 1 1 1 0 702.3445 2025.049 S140s TMT10 132 (K) ALLAQEQVsFFEEER (N) ALLAQEQVS(1.0)FFEEER s:Phosphorylated S CIT 238656.7 3 4 366.1 342.11 HUMAN 1 2.2866 11.1426 LLASDLNTDGDMRVT-p Q86YP4-3;T42-p LLASDLNTDGDMRVT 0.745843600698235 0.0511375493744454 0.0486666666666667 0.227666666666667 2.41769316244509 17.2411882072262 0.0486666666666667 0.227666666666667 0.573100363286185 0.0188747487508973 0.599437513668209 3.30772558088954 Q86YP4 GATAD2A Q86YP4.3.T42.p_GATAD2A Q86YP4-3_T42t _1_1_42_42 Q86YP4-3 Q86YP4-3|Q86YP4-2|H7C3H1|V9GY85 Isoform 3 of Transcriptional repressor p66-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25939.25939.4 17.92 17.92 1.161 4 1 1 0 815.9098 3180.652 T42t TMT10 34 (R) GLLASDLNtDGDMRVTPEPGAGPTQGLLR (A) GLLAS(0.0)DLNT(0.99)DGDMRVT(0.0)PEPGAGPT(0.0)QGLLR t:Phosphorylated T GATAD2A 68475 5 2 1046.1 184.48 HUMAN 1 2.4177 17.2412 LLASGLGSKRPSFSS-p A3KN83;S811-p LLASGLGSKRPSFSS 0.811737876665422 0.15091491006146 -0.0396666666666667 0.151 1.74145676690433 10.8021397932069 -0.0396666666666667 0.151 0.66965994571047 0.0831354057382139 -0.450752770007896 2.12054458959558 A3KN83 SBNO1 A3KN83.S811.p_SBNO1 A3KN83_S811s _1_1_811_811 A3KN83 A3KN83|A3KN83-2 Protein strawberry notch homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31682.31682.3 14.16 14.16 1.142 5 1 1 0 799.7622 2317.3015 S811s TMT10 794 (K) SIDPDSIQSALLASGLGsK (R) S(0.0)IDPDS(0.0)IQS(0.0)ALLAS(0.0)GLGS(0.99)K K:TMT10,s:Phosphorylated S SBNO1 154994.1 1 5 861.1 210.54 HUMAN 1 -1.7415 10.8021 LLASPPPSGGGARRG-p Q9C0C2;S695-p LLASPPPSGGGARRG 0.559196395870671 0.10309582422187 0.0826666666666667 -0.399666666666667 4.65849133276092 13.0337371654626 0.0826666666666667 -0.399666666666667 0.342098261155568 0.0497308959405593 1.04108591037029 -2.51576337295039 Q9C0C2 TNKS1BP1 Q9C0C2.S695.p_TNKS1BP1 Q9C0C2_S695s _1_1_695_695 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31238.31238.3 16.61 14.1 2.239 2 1 1 0 673.3347 1938.0282 S695s TMT10 684 (R) WLDDLLASPPPsGGGAR (R) WLDDLLAS(0.0)PPPS(0.99)GGGAR s:Phosphorylated S TNKS1BP1 182819.3 1 22 4.1 2105.7 HUMAN 1 4.6585 -13.0337 LLDDFDGTYETQGGK-p P21709;T780-p LLDDFDGTYETQGGK 0.994167574639875 0.0489535260449866 -0.00133333333333334 -0.435666666666667 0.050215175009447 17.5253207281267 -0.00133333333333334 -0.435666666666667 0.988504117140315 0.0176794164974986 -0.0150860803514538 -3.364165238276 P21709 EPHA1 P21709.T780.p_EPHA1 P21709_T780t _1_1_780_780 P21709 P21709 Ephrin type-A receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25425.25425.3 17.16 12.13 1.231 3 1 1 0 892.7955 2596.4023 T780t TMT10 773 (R) LLDDFDGtYETQGGKIPIR (W) LLDDFDGT(0.99)Y(0.0)ET(0.0)QGGKIPIR K:TMT10,t:Phosphorylated T EPHA1 109779.8 1 1 4516.1 30.43 HUMAN 1 -0.0502 -17.5253 LLDIPLQTPHKLVDT-p P49792;T2153-p LLDIPLQTPHKLVDT 0.470077219308049 0.00722530774671401 -0.2 -0.796666666666667 6.05390602244012 30.63846155241 -0.2 -0.796666666666667 0.24809007920499 0.000863284303999996 -1.2941608173977 -6.61796857925343 P49792 RANBP2 P49792.T2153.p_RANBP2 P49792_T2153t _1_1_2153_2153 P49792 P49792|Q99666|O14715|J3KNE0|A6NKT7 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28616.28616.4 15.93 15.93 8.958 2 1 1 0 642.6244 2487.5063 T2153t TMT10 2145 (R) LLLDIPLQtPHKLVDTGR (A) LLLDIPLQT(0.99)PHKLVDT(0.0)GR K:TMT10,t:Phosphorylated T RANBP2 362585.9 3 42 9.1 1298.62 HUMAN 1 -6.0539 -30.6385 LLDLPDASVNGWSSD-p Q13488;S685-p LLDLPDASVNGWSSD 0.297567897584636 0.00590388514214645 -0.196333333333333 0.517 9.90066086009198 32.2060901242877 -0.196333333333333 0.517 0.102313729100443 0.000601715207171195 -1.96445690924235 7.120050887381 Q13488 TCIRG1 Q13488.S685.p_TCIRG1 Q13488_S685s _1_1_685_685 Q13488 Q13488 V-type proton ATPase 116 kDa subunit a isoform 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29220.29220.3 12.07 12.07 2.67 3 1 1 0 881.097 2561.3135 S685s TMT10 676 (K) AGLLDLPDAsVNGWSSDEEK (A) AGLLDLPDAS(0.99)VNGWS(0.0)S(0.0)DEEK K:TMT10,s:Phosphorylated S TCIRG1 93708 1 1 5509.1 18.68 HUMAN 1 -9.9007 32.2061 LLDLSFLSEEEKDLI-p Q96C24;S11-p LLDLSFLSEEEKDLI 0.190631118670779 0.0615014068075844 -0.400333333333333 0.516666666666667 14.0777183404544 16.1257549971131 -0.400333333333333 0.516666666666667 0.0391046286418599 0.0244019481669445 -2.7071988916896 3.09016913061833 Q96C24 SYTL4 Q96C24.S11.p_SYTL4 Q96C24_S11s _1_1_11_11 Q96C24 Q96C24|Q96C24-2 Synaptotagmin-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.37549.37549.3 15.94 15.94 1.211 3 1 1 0 663.9888 1909.9844 S11s Acetyl 2 (M) SELLDLSFLsEEEK (D) S(0.0)ELLDLS(0.0)FLS(0.99)EEEK K:TMT10,s:Phosphorylated S SYTL4 76649.8 1 1 1078.1 180.34 HUMAN 1 -14.0777 16.1258 LLDMGNMSASDLDVA-p Q9NV70-2;S484-p LLDMGNMSASDLDVA 0.673855573424917 0.631989286822723 -0.0563333333333333 0.0523333333333333 3.2136561368319 2.70928363609282 -0.0563333333333333 0.0523333333333333 0.4771274316494 0.535885043864205 -0.763484013532069 0.660631918408081 Q9NV70 EXOC1 Q9NV70.2.S484.p_EXOC1 Q9NV70-2_S484s _1_1_484_484 Q9NV70-2 Q9NV70|Q9NV70-2 Isoform 2 of Exocyst complex component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25279.25279.3 26.94 26.94 2.089 6 1 1 0 870.0553 2528.1806 S484s TMT10 472 (R) SQSSSLLDMGNMsASDLDVADR (T) S(0.0)QS(0.0)S(0.0)S(0.0)LLDMGNMS(0.99)AS(0.0)DLDVADR s:Phosphorylated S EXOC1 101136.7 54 10 871.2 209.68 HUMAN 1 -3.2137 2.7093 LLDQNSQTPPPSPFS-p O75592;T2645-p LLDQNSQTPPPSPFS 0.14415361707016 0.0248010178031132 -0.249333333333333 -0.375666666666667 17.1747515212481 21.8417693543333 -0.249333333333333 -0.375666666666667 0.0191657071494045 0.00654369523790993 -3.29713324041266 -4.28135402363708 O75592 MYCBP2 O75592.T2645.p_MYCBP2 O75592_T2645t _1_1_2645_2645 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20902.20902.5 21.18 21.18 2.38 5 1 1 0 925.253 4542.2802 T2645t TMT10 2623 (R) DRGGNQYLRHEDEQALLDQNSQtPPPSPFSVQAFNK (G) DRGGNQY(0.0)LRHEDEQALLDQNS(0.0)QT(0.99)PPPS(0.0)PFS(0.0)VQAFNK K:TMT10,t:Phosphorylated T MYCBP2 518176.7 14 4 252.1 405.77 HUMAN 1 -17.1748 -21.8418 LLDRLDDSPDQCRDS-p Q12955;S4229-p LLDRLDDSPDQCRDS 0.429151096856941 0.54723619067071 -0.122333333333333 -0.063 6.76555389919166 3.52081072988364 -0.122333333333333 -0.063 0.210593329112596 0.444548272582807 -1.41990897520232 -0.824219582848619 Q12955 ANK3 Q12955.S4229.p_ANK3 Q12955_S4229s _1_1_4229_4229 Q12955 Q12955|Q12955-4|Q12955-5|Q12955-7 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22604.22604.5 17.56 12.65 1.678 6 1 1 0 704.5607 3438.8051 S4229s TMT10 4217 (R) RVTGGLLDRLDDsPDQCRDSITSYLK (G) RVT(0.0)GGLLDRLDDS(0.99)PDQCRDS(0.0)IT(0.0)S(0.0)Y(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANK3 482683.6 14 27 135.1 530.51 HUMAN 1 -6.7656 -3.5208 LLDSMFGSPGGLREA-p Q9HBE1-2;S282-p LLDSMFGSPGGLREA 0.914159456796634 0.021727551236405 0.0233333333333333 -0.432 0.762805887755883 22.7360961990878 0.0233333333333334 -0.432 0.83891780376968 0.00532586777570542 0.213274658054079 -4.48736509264974 Q9HBE1 PATZ1 Q9HBE1.2.S282.p_PATZ1 Q9HBE1-2_S282s _1_1_282_282 Q9HBE1-2 Q9HBE1|Q9HBE1-3|Q9HBE1-2|Q9HBE1-4 Isoform 2 of POZ-, AT hook-, and zinc finger-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.31822.31822.3 19.4 19.4 3.778 2 1 1 0 615.3048 1763.9312 S282s TMT10 273 (K) ANLLDSMFGsPGGLR (E) ANLLDS(0.0)MFGS(0.99)PGGLR s:Phosphorylated S PATZ1 59135.1 3 4 1807.2 113.57 HUMAN 1 0.7628 -22.7361 LLDVPDKSQEKADLY-p Q9NX62;S283-p LLDVPDKSQEKADLY 0.119595941972859 0.0247118059081441 -0.517333333333333 0.346666666666667 19.190786820886 21.8759542382412 -0.517333333333333 0.346666666666667 0.0120481764112971 0.00649238964160446 -3.7073963599414 4.28911804241678 Q9NX62 IMPAD1 Q9NX62.S283.p_IMPAD1 Q9NX62_S283s _1_1_283_283 Q9NX62 Q9NX62 Inositol monophosphatase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27652.27652.4 13.47 12.01 99 1 1 1 0 581.3382 2242.3625 S283s TMT10 273 (K) VLALLDVPDKsQEK (A) VLALLDVPDKS(1.0)QEK K:TMT10,s:Phosphorylated S IMPAD1 38851.9 2 1 6167.1 13.47 HUMAN 1 -19.1908 21.876 LLEANRHSPGPERDL-p Q9UDT6;S923-p LLEANRHSPGPERDL 0.299833271733525 0.0257079144253812 0.208666666666667 0.412666666666667 9.83221514232782 21.6267358587852 0.208666666666667 0.412666666666667 0.103938988421179 0.00687585032214975 1.95257470587827 4.23271291200991 Q9UDT6 CLIP2 Q9UDT6.S923.p_CLIP2 Q9UDT6_S923s _1_1_923_923 Q9UDT6 Q9UDT6|Q9UDT6-2 CAP-Gly domain-containing linker protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13974.13974.4 19.01 19.01 99 1 1 1 0 500.0187 1917.0868 S923s TMT10 914 (R) VLLLEANRHsPGPER (D) VLLLEANRHS(1.0)PGPER s:Phosphorylated S CLIP2 116291.8 2 26 372.2 339.16 HUMAN 1 9.8322 21.6267 LLEDEGGSGRPLLQA-p Q9Y490;S604-p LLEDEGGSGRPLLQA 0.222409462668413 0.138371129389698 -0.263333333333333 -0.193 12.5623115243513 11.3153126047996 -0.263333333333333 -0.193 0.0554330592993005 0.07387010894382 -2.43248875017109 -2.21041472571823 Q9Y490 TLN1 Q9Y490.S604.p_TLN1 Q9Y490_S604s _1_1_604_604 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33364.33364.4 16.98 16.98 99 1 1 1 0 665.8762 2580.5125 S604s TMT10 593 (K) LLAALLEDEGGsGRPLLQAAK (G) LLAALLEDEGGS(1.0)GRPLLQAAK K:TMT10,s:Phosphorylated S TLN1 271930.4 1 6 267.1 395.2 HUMAN 1 -12.5623 -11.3153 LLEDGSESPAKRICP-p Q08999;S1112-p LLEDGSESPAKRICP 0.375072477437412 0.888045750838673 -0.135666666666667 -0.017 7.88495307122117 0.724929684658123 -0.135666666666667 -0.017 0.16274389012462 0.846266270344563 -1.61519651937901 -0.203362141111617 Q08999 RBL2 Q08999.S1112.p_RBL2 Q08999_S1112s _1_1_1112_1112 Q08999 Q08999|Q08999-2 Retinoblastoma-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19590.19590.2 16.92 11.82 2.195 2 1 1 0 927.487 1773.9999 S1112s TMT10 1103 (R) GILLEDGSEsPAK (R) GILLEDGS(0.0)ES(0.99)PAK K:TMT10,s:Phosphorylated S RBL2 129790.7 8 16 408.1 323.79 HUMAN 1 -7.885 -0.7249 LLEDSEESSEETVSR-p O60231;S106-p LLEDSEESSEETVSR 0.527370205367512 0.385944627922461 -0.0948333333333334 0.1 5.13975606699446 5.49686185610979 -0.0948333333333334 0.1 0.306213542181186 0.28204201865739 -1.12960853645125 1.19411966131944 O60231 DHX16 O60231.S106.p_DHX16 O60231_S103sS106s_2_2_103_106 O60231 O60231 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17763.18174.3 9.82 9.82 1.16 5 2 2 0 700.2938 1938.9341 S103s S106s TMT10 99 (R) LLEDsEEsSEETVSR (A) LLEDS(0.99)EES(0.99)S(0.0)EET(0.0)VS(0.0)R s:Phosphorylated S DHX16 119946.1 3 6 2216.1 93.19 HUMAN 2 -5.1398 5.4969 LLEEEEESGEEAAEA-p Q969H6;S154-p LLEEEEESGEEAAEA 0.599833489163788 0.201746154326303 0.0743333333333333 0.146666666666667 4.09968809108984 9.14682252106609 0.0743333333333333 0.146666666666667 0.389073087095753 0.121707613846356 0.936137733921672 1.83311042215638 Q969H6 POP5 Q969H6.S154.p_POP5 Q969H6_S154s_1_1_154_154 Q969H6 Q969H6|Q969H6-2 Ribonuclease P/MRP protein subunit POP5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19415.19415.2 15.3 15.3 15.304 2 1 1 0 1233.9828 2371.0002 S154s M162m TMT10 145 (R) SCLLEEEEEsGEEAAEAmE (-) S(0.0)CLLEEEEES(0.99)GEEAAEAM(1.0)E C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine POP5 19275.7 3 1 5925.1 15.3 HUMAN 1 4.0997 9.1468 LLEGDDDTLSSVDEK-p P50851;T2062-p LLEGDDDTLSSVDEK 0.280079390332856 0.00442634374054194 -0.306666666666667 0.564666666666667 10.4448734082807 34.5780354488552 -0.306666666666667 0.564666666666667 0.0902636017862838 0.000348494922673687 -2.0591174276543 7.94015862228605 P50851 LRBA P50851.T2062.p_LRBA P50851_T2062t_1_1_2062_2062 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23201.23479.4 15.54 15.54 1.293 5 1 1 0 890.6776 3478.7073 N2052n T2062t TMT10 2042 (R) SQALGNQNSEnEILLEGDDDtLSSVDEK (D) S(0.0)QALGN(0.0)QN(0.0)S(0.0)EN(0.99)EILLEGDDDT(0.99)LS(0.0)S(0.0)VDEK K:TMT10,n:Deamidated,t:Phosphorylated T LRBA 321783.7 6 25 74.1 649.16 HUMAN 1 -10.4449 34.578 LLEGNPDTHSWEMVG-p Q14157-5;T93-p LLEGNPDTHSWEMVG 0.731722721343798 0.489079154764193 0.0543333333333333 0.0726666666666667 2.57464342500817 4.15193564117441 0.0543333333333333 0.0726666666666667 0.552758790024586 0.384420408507691 0.632609397338907 0.94589836566028 Q14157 UBAP2L Q14157.5.T93.p_UBAP2L Q14157-5_T93t _1_1_93_93 Q14157-5 Q14157-5|F8W726|Q14157-3|Q14157-1|Q14157-4 Isoform 5 of Ubiquitin-associated protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24976.24976.4 17.01 17.01 1.163 2 1 1 0 777.1656 3025.6748 T93t TMT10 82 (R) AINVLLEGNPDtHSWEMVGKK (K) AINVLLEGNPDT(0.99)HS(0.0)WEMVGKK K:TMT10,t:Phosphorylated T UBAP2L 116866.1 4 2 189.1 467.5 HUMAN 1 2.5746 4.1519 LLEISGHSRHSEGLR-p Q6P9B6;S443-p LLEISGHSRHSEGLR 0.599304429327995 0.31520680144833 0.073 0.104666666666667 4.10840788409357 6.62503206597555 0.073 0.104666666666667 0.38829268731561 0.217518797353873 0.93779595549162 1.39483894895298 Q6P9B6 TLDC1 Q6P9B6.S443.p_TLDC1 Q6P9B6_S440sS443sS446s_3_3_440_446 Q6P9B6 Q6P9B6 TLD domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26690.26690.4 11.12 11.12 11.116 4 3 3 0 989.4409 3714.8408 S440s S443s S446s TMT10 425 (K) SILDADPEAQALLEIsGHsRHsEGLREVPDDE (-) S(0.0)ILDADPEAQALLEIS(0.99)GHS(0.99)RHS(0.99)EGLREVPDDE s:Phosphorylated S TLDC1 51620.3 1 4 2898.1 66.6 HUMAN 1 4.1084 6.625 LLENLDDSVFSKRHA-p Q68DK7;S501-p LLENLDDSVFSKRHA 0.998180995519267 0.618252567553959 -0.000333333333333338 -0.0516666666666666 0.0138469645542625 2.83810096525194 -0.000333333333333346 -0.0516666666666667 0.996816696073684 0.520223424336156 -0.00417728561918151 -0.687238959524887 Q68DK7 MSL1 Q68DK7.S501.p_MSL1 Q68DK7_S501s _1_1_501_501 Q68DK7 Q68DK7|J3KSZ8|Q68DK7-2|Q68DK7-3 Male-specific lethal 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28283.28283.4 9.8 9.8 3.239 4 1 1 0 869.9273 3396.7324 S501s TMT10 480 (R) DHSVEPLRDPNPSDLLENLDDsVFSK (R) DHS(0.0)VEPLRDPNPS(0.0)DLLENLDDS(0.99)VFS(0.0)K K:TMT10,s:Phosphorylated S MSL1 67811.9 1 15 324.1 362.01 HUMAN 1 -0.0138 -2.8381 LLEPPRGTPDRSQAD-p Q53GT1;T605-p LLEPPRGTPDRSQAD 0.970128728299404 0.382559884498192 0.00799999999999998 -0.136666666666667 0.2591552363184 5.54400308358582 0.00799999999999999 -0.136666666666667 0.942072825080026 0.278997101646711 0.0761014967669277 -1.20261558169292 Q53GT1 KLHL22 Q53GT1.T605.p_KLHL22 Q53GT1_T605t _1_1_605_605 Q53GT1 Q53GT1|Q53GT1-3 Kelch-like protein 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33889.33889.4 22.8 17.48 1.683 8 1 1 0 1166.7598 4584.0834 T605t TMT10 596 (R) SLLLEPPRGtPDRSQADPDFASEVMSVSDWEEFDNSSED (-) S(0.0)LLLEPPRGT(0.99)PDRS(0.0)QADPDFAS(0.0)EVMS(0.0)VS(0.0)DWEEFDNS(0.0)S(0.0)ED t:Phosphorylated T KLHL22 72692.4 3 1 4406.1 31.91 HUMAN 1 0.2592 -5.544 LLERDGGSGNSTIIV-p Q7Z6Z7;S2362-p LLERDGGSGNSTIIV 0.708046873229158 0.35009355225705 0.086 0.316666666666667 2.81872225958749 6.04318063950577 0.086 0.316666666666667 0.522549906108203 0.24870352228673 0.683345940595805 1.29194280463827 Q7Z6Z7 HUWE1 Q7Z6Z7.S2362.p_HUWE1 Q7Z6Z7_S2362s _1_1_2362_2362 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8581.8581.2 7.9 7.9 3.975 4 1 1 0 671.8037 1262.6335 S2362s Hydrogen 2359 (R) DGGsGNSTIIVSR (S) DGGS(0.99)GNS(0.0)T(0.0)IIVS(0.0)R s:Phosphorylated S HUWE1 485818.9 3 27 11.1 1210.45 HUMAN 1 2.8187 6.0432 LLERRPASPLGPAGG-p Q4ZIN3;S568-p LLERRPASPLGPAGG 0.171306633335012 0.631242031978969 0.222333333333333 0.0556666666666667 15.2701214313844 2.7156927257434 0.222333333333333 0.0556666666666667 0.0297158294330599 0.535094796134978 2.92926788375372 0.661962090263192 Q4ZIN3 TMEM259 Q4ZIN3.S568.p_TMEM259 Q4ZIN3_S568s _1_1_568_568 Q4ZIN3 Q4ZIN3 Membralin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24242.24242.5 15.15 14.31 5.168 12 1 1 0 1096.9296 5400.6491 S568s TMT10 565 (R) RPAsPLGPAGGLPHAPQDSVPPSDSAASDTTPLGAAVGGPSPASMAPTEAPSEVGS (-) RPAS(0.99)PLGPAGGLPHAPQDS(0.0)VPPS(0.0)DS(0.0)AAS(0.0)DT(0.0)T(0.0)PLGAAVGGPS(0.0)PAS(0.0)MAPT(0.0)EAPS(0.0)EVGS(0.0) s:Phosphorylated S TMEM259 68172.7 2 1 5939.1 15.15 HUMAN 1 15.2701 2.7157 LLESSLSSSEGEEPV-p P08648;S127-p LLESSLSSSEGEEPV 0.657302725891418 0.832654407184444 -0.0703333333333333 0.0213333333333333 3.4194302464798 1.114016386187 -0.0703333333333334 0.0213333333333333 0.455047754220502 0.773745901120373 -0.804388499065835 0.302208442660528 P08648 ITGA5 P08648.S127.p_ITGA5 P08648_S127s _1_1_127_127 P08648 P08648 Integrin alpha-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23646.23646.2 17.04 17.04 1.158 6 1 1 0 1261.1252 2441.2699 S127s TMT10 120 (R) LLESSLSsSEGEEPVEYK (S) LLES(0.0)S(0.0)LS(0.0)S(0.99)S(0.0)EGEEPVEY(0.0)K K:TMT10,s:Phosphorylated S ITGA5 115675.4 2 1 5699.1 17.04 HUMAN 1 -3.4194 1.114 LLETHLPSKKKKVLL-p O00567;S86-p LLETHLPSKKKKVLL 0.256885189355668 0.222842594978246 -0.164 0.266666666666667 11.21157462588 8.58792855702513 -0.164 0.266666666666667 0.0756558539095215 0.138422645239507 -2.19321765223758 1.73643719196221 O00567 NOP56 O00567.S86.p_NOP56 O00567_S86s _1_1_86_86 O00567 O00567 Nucleolar protein 56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22683.22683.3 12.75 12.75 6.75 2 1 1 0 563.664 1609.0089 S86s TMT10 78 (R) LLLETHLPsK (K) LLLET(0.0)HLPS(0.99)K K:TMT10,s:Phosphorylated S NOP56 66448.1 1 1 262.1 396.77 HUMAN 1 -11.2116 8.5879 LLFEGAGSNPGDKTL-p F5GYQ1;S324-p LLFEGAGSNPGDKTL 0.151231149367929 0.471000865324884 -0.422 0.0723333333333333 16.5269062903661 4.35825939737825 -0.422 0.0723333333333333 0.0222489423629156 0.366584468072162 -3.17002701639213 0.984843172545426 F5GYQ1 NotFound F5GYQ1.S324.p_NotFound F5GYQ1_S324s _1_1_324_324 F5GYQ1 F5GYQ1|P61421|R4GN72 V-type proton ATPase subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23143.23143.3 11.96 11.96 99 1 1 1 0 614.9848 1762.974 S324s TMT10 317 (K) LLFEGAGsNPGDK (T) LLFEGAGS(1.0)NPGDK K:TMT10,s:Phosphorylated S ATP6V0D1 45115.6 1 1 6378.1 11.96 HUMAN 1 -16.5269 4.3583 LLFGDVTSLKSFDSL-p Q5JTC6;S318-p LLFGDVTSLKSFDSL 0.0658837618616825 0.0981751076335683 -0.637 -0.186333333333333 25.4739290477251 13.324012763862 -0.637 -0.186333333333333 0.00283535273357498 0.0465156103212025 -5.16481858728712 -2.5681682661771 Q5JTC6 AMER1 Q5JTC6.S318.p_AMER1 Q5JTC6_S318s _1_1_318_318 Q5JTC6 Q5JTC6|Q5JTC6-2 APC membrane recruitment protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.37415.37415.4 16.51 16.51 1.127 3 1 1 0 833.2003 3249.8135 S318s TMT10 293 (K) VVAGEVNPPNGPVGDPLSLLFGDVTsLK (S) VVAGEVNPPNGPVGDPLS(0.0)LLFGDVT(0.0)S(0.99)LK K:TMT10,s:Phosphorylated S AMER1 125168.2 2 1 2991.1 63.87 HUMAN 1 -25.4739 -13.324 LLFQKGKSKDDPDDC-p Q14D04;S755-p LLFQKGKSKDDPDDC 0.80445217467316 0.896459836193613 -0.0766666666666667 0.0186666666666667 1.82214545153899 0.666092213216477 -0.0766666666666667 0.0186666666666667 0.657333029046973 0.857809355928243 -0.469044420249839 0.187870090974337 Q14D04 VEPH1 Q14D04.S755.p_VEPH1 Q14D04_S755s _1_1_755_755 Q14D04 Q14D04|Q14D04-2 Ventricular zone-expressed PH domain-containing protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14241.14241.4 10.72 10.72 8.309 2 1 1 0 700.8701 2720.4946 S755s TMT10 753 (K) GKsKDDPDDCPIELSK (V) GKS(0.99)KDDPDDCPIELS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S VEPH1 95542.4 1 11 341.1 353.64 HUMAN 1 -1.8221 0.6661 LLGAGRQSLLRTAKD-p Q9NSI6-2;S110-p LLGAGRQSLLRTAKD 0.727198246912875 0.0350209326355778 -0.0503333333333333 -0.274333333333333 2.62347210153901 19.5984377591938 -0.0503333333333333 -0.274333333333333 0.546578808837686 0.0109687269139523 -0.642839725600416 -3.78984008031454 Q9NSI6 BRWD1 Q9NSI6.2.S110.p_BRWD1 Q9NSI6-2_S110s _1_1_110_110 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3|Q9NSI6-4 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21568.21568.3 8.56 8.56 8.564 3 1 1 0 594.0073 1700.038 S110s TMT10 100 (R) VTSLLGAGRQsLLR (T) VT(0.0)S(0.0)LLGAGRQS(0.99)LLR s:Phosphorylated S BRWD1 259915.1 1 1 208.1 444.81 HUMAN 1 -2.6235 -19.5984 LLGAYADSDDDDNDV-p Q8N3X1-2;S118-p LLGAYADSDDDDNDV 0.42706404984127 0.11512281704371 0.109666666666667 0.164666666666667 6.80628804261911 12.3862328483551 0.109666666666667 0.164666666666667 0.20862732794343 0.0577266978467546 1.4270605115994 2.399791874824 Q8N3X1 FNBP4 Q8N3X1.2.S118.p_FNBP4 Q8N3X1-2_S118s _1_1_118_118 Q8N3X1-2 Q8N3X1-2 Isoform 2 of Formin-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25628.25938.3 23.7 21.24 2.503 4 1 1 0 1013.7869 2959.3879 S118s TMT10 105 (K) ATGGLCLLGAYADsDDDDNDVSEK (L) AT(0.0)GGLCLLGAY(0.0)ADS(0.99)DDDDNDVS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FNBP4 110905.5 7 2 405.1 325.34 HUMAN 1 6.8063 12.3862 LLGDAPVSPSSQKLK-p Q9NYB0;S203-p LLGDAPVSPSSQKLK 0.186994852223034 0.013916377534992 0.262666666666667 -0.561333333333333 14.3113682305227 25.7653191588876 0.262666666666667 -0.561333333333333 0.037056395843073 0.00265135624019904 2.75026758520913 -5.23346263582109 Q9NYB0 TERF2IP Q9NYB0.S203.p_TERF2IP Q9NYB0_S203s _1_1_203_203 Q9NYB0 Q9NYB0 Telomeric repeat-binding factor 2-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13175.13175.3 23.43 23.43 3.297 4 1 1 0 860.4474 2499.3608 S203s Hydrogen 190 (R) GQEHKYLLGDAPVsPSSQK (L) GQEHKY(0.0)LLGDAPVS(0.99)PS(0.0)S(0.0)QK K:TMT10-Lys-Only,s:Phosphorylated S TERF2IP 44430.3 6 5 1047.1 184.33 HUMAN 1 14.3114 -25.7653 LLGGGSDSI______-p Q9UPQ9;S1832-p LLGGGSDSI______ 0.31987346963021 0.391786192786336 -0.242333333333333 0.163333333333333 9.26616919979815 5.41089521659193 -0.242333333333333 0.163333333333333 0.118408554670038 0.28768053541646 -1.8544483180026 1.17859714268053 Q9UPQ9 TNRC6B Q9UPQ9.S1832.p_TNRC6B Q9UPQ9_S1832s _1_1_1832_1832 Q9UPQ9 Q9UPQ9|Q9UPQ9-1|Q9UPQ9-2 Trinucleotide repeat-containing gene 6B protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37677.37677.2 18.14 18.14 1.147 3 1 1 0 1082.0338 2083.0943 S1832s TMT10 1814 (R) MGSPAPLLPGDLLGGGSDsI (-) MGS(0.0)PAPLLPGDLLGGGS(0.0)DS(0.99)I s:Phosphorylated S TNRC6B 194854.6 2 14 865.1 210.19 HUMAN 1 -9.2662 5.4109 LLGHLLATKLKRFLL-p P51858-3;T19-p LLGHLLATKLKRFLL 0.661266118642171 0.0902641979047347 -0.059 -0.305 3.36269211868282 13.817792938432 -0.059 -0.305 0.461031700143541 0.041516497367478 -0.793163729385447 -2.65795617782456 P51858 HDGF P51858.3.T19.p_HDGF P51858-3_T19t _1_1_19_19 P51858-3 P51858-3 Isoform 3 of Hepatoma-derived growth factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25451.25704.3 7.08 3.97 99 1 1 1 0 798.4182 2313.2917 T19t Acetyl 2 (M) HPEGGQFVPQLLGHLLAtK (L) HPEGGQFVPQLLGHLLAT(1.0)K K:TMT10,t:Phosphorylated T HDGF 28320.6 1 11 213.2 437.7 HUMAN 1 -3.3627 -13.8178 LLGIRRTSTAPAASP-p P11498;S20-p LLGIRRTSTAPAASP 0.153349579172897 0.00476719426519808 0.353 0.691 16.3773749594576 33.9369507377809 0.353 0.691 0.0230283331661363 0.000403928899410849 3.14098972540856 7.71094875662023 P11498 PC P11498.S20.p_PC P11498_S20s _1_1_20_20 P11498 P11498|P11498-2 Pyruvate carboxylase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7026.7026.2 10.28 10.28 1.166 4 1 1 0 740.8727 1400.7695 S20s TMT10 19 (R) TsTAPAASPNVR (R) T(0.0)S(0.99)T(0.0)APAAS(0.0)PNVR s:Phosphorylated S PC 130372.9 1 1 3715.1 44.68 HUMAN 1 16.3774 33.937 LLGKDNPSPGPSRDS-p Q9NQS1;S261-p LLGKDNPSPGPSRDS 0.481836619360747 0.0012092853784901 0.172 -1.014 5.83465636138281 47.9738067878797 0.172 -1.014 0.260936218249619 1.59448089977016e-05 1.25505242591506 -14.3727053758101 Q9NQS1 AVEN Q9NQS1.S261.p_AVEN Q9NQS1_S261s _1_1_261_261 Q9NQS1 Q9NQS1 Cell death regulator Aven HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17395.17395.3 13.78 13.78 2 3 1 1 0 873.1262 2537.391 S261s TMT10 246 (K) SVAAGCPVLLGKDNPsPGPSR (D) S(0.0)VAAGCPVLLGKDNPS(0.99)PGPS(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AVEN 38733.7 1 2 2257.1 91.07 HUMAN 1 5.8347 -47.9738 LLGNLPGSKRQPQTP-p P46013;S2420-p LLGNLPGSKRQPQTP 0.688548333856034 0.119736570141193 0.0643333333333333 -0.227333333333333 3.0408198187871 12.1536571804406 0.0643333333333333 -0.227333333333333 0.496498588440047 0.0609023824157465 0.728691137745776 -2.35842454801998 P46013 MKI67 P46013.S2420.p_MKI67 P46013_S2420s _1_1_2420_2420 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.33718.33718.4 22.54 18.77 10.237 3 1 1 0 816.9598 3184.8549 S2420s TMT10 2399 (K) NINTFVETPVQKLDLLGNLPGsK (R) NINT(0.0)FVET(0.0)PVQKLDLLGNLPGS(0.99)K K:TMT10,s:Phosphorylated S MKI67 360912.4 2 84 5.1 1918.46 HUMAN 1 3.0408 -12.1537 LLGNLPGSKRRPQTP-p P46013;S1937-p LLGNLPGSKRRPQTP 0.295154464069677 0.10958921050137 -0.199666666666667 -0.389666666666667 9.98527922282898 12.6831368186842 -0.199666666666667 -0.389666666666667 0.100339533534383 0.0539121085911481 -1.97915305876486 -2.45281683317682 P46013 MKI67 P46013.S1937.p_MKI67 P46013_S1937s _1_1_1937_1937 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28830.28830.3 14.28 11.54 99 1 1 1 0 555.651 1584.9725 S1937s TMT10 1928 (K) LDLLGNLPGsK (R) LDLLGNLPGS(1.0)K K:TMT10,s:Phosphorylated S MKI67 360912.4 2 64 5.1 1918.46 HUMAN 1 -9.9853 -12.6831 LLGQRAPSPPLSQVF-p Q9NRA8;S564-p LLGQRAPSPPLSQVF 0.988589863314434 0.435854504646058 -0.00266666666666666 -0.113 0.101997581638616 4.8053602657677 -0.00266666666666667 -0.113 0.976787834115172 0.330722676066902 -0.0304656060854042 -1.06805681816232 Q9NRA8 EIF4ENIF1 Q9NRA8.S564.p_EIF4ENIF1 Q9NRA8_S564s _1_1_564_564 Q9NRA8 Q9NRA8-3|Q9NRA8-2 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36915.36915.5 36.52 36.52 1.122 10 1 1 0 1128.0027 5556.0209 S564s TMT10 525 (K) NILQELLGQPVQRPASSNLLSGLMGSLEPTTSLLGQRAPsPPLSQVFQTR (A) NILQELLGQPVQRPAS(0.0)S(0.0)NLLS(0.0)GLMGS(0.0)LEPT(0.0)T(0.0)S(0.0)LLGQRAPS(0.99)PPLS(0.0)QVFQT(0.0)R s:Phosphorylated S EIF4ENIF1 108541.3 11 14 150.1 511.59 HUMAN 1 -0.102 -4.8054 LLGSLGPSPGPAREG-p Q7Z6J9;S267-p LLGSLGPSPGPAREG 0.198300279868763 0.255670999258198 -0.242333333333333 0.153666666666667 13.6825888914811 7.80165434502963 -0.242333333333333 0.153666666666667 0.0428293132626829 0.165895484633405 -2.63482389068841 1.60023899123032 Q7Z6J9 TSEN54 Q7Z6J9.S267.p_TSEN54 Q7Z6J9_S267s _1_1_267_267 Q7Z6J9 Q7Z6J9 tRNA-splicing endonuclease subunit Sen54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30575.30781.3 13.64 13.64 1.158 2 1 1 0 724.379 2091.1548 S267s TMT10 253 (K) GPGGPFQLLGSLGPsPGPAR (E) GPGGPFQLLGS(0.0)LGPS(0.99)PGPAR s:Phosphorylated S TSEN54 59331.7 2 5 2262.1 90.86 HUMAN 1 -13.6826 7.8017 LLHSQRDSAARTRLF-p Q96RG2-4;S939-p LLHSQRDSAARTRLF 0.127580448450417 0.0113307612189567 0.442666666666667 -0.474333333333333 18.5430916860458 27.2419952566276 0.442666666666667 -0.474333333333333 0.0139859132908361 0.00188712415823649 3.57302268031671 -5.62709090003542 Q96RG2 PASK Q96RG2.4.S939.p_PASK Q96RG2-4_S939s _1_1_939_939 Q96RG2-4 Q96RG2-2|Q96RG2-4 Isoform 3 of PAS domain-containing serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5762.5762.3 10.23 10.23 2.39 2 1 1 0 559.9473 1597.8608 S939s TMT10 931 (K) DLLHSQRDsAAR (T) DLLHS(0.0)QRDS(0.99)AAR s:Phosphorylated S PASK 125270.5 2 4 3643.1 46.2 HUMAN 1 18.5431 -27.242 LLHSWRSSSFGNFDR-p Q9NSI8-3;S90-p LLHSWRSSSFGNFDR 0.158297715435374 0.164206056203252 -0.352333333333333 0.185666666666667 16.0474358412208 10.3167990354485 -0.352333333333333 0.185666666666667 0.0248459962808852 0.0929651333217795 -3.07730376419534 2.03595415112158 Q9NSI8 SAMSN1 Q9NSI8.3.S90.p_SAMSN1 Q9NSI8-3_S90s_1_1_90_90 Q9NSI8-3 Q9NSI8-3 Isoform 3 of SAM domain-containing protein SAMSN-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10693.10693.2 8.17 0.88 1.132 3 1 1 0 815.3585 1548.7757 S90s N94n TMT10 89 (R) SsSFGnFDRFR (N) S(0.0)S(0.99)S(0.0)FGN(1.0)FDRFR s:Phosphorylated S,n:Deamidated SAMSN1 50196.6 3 1 7013.1 8.17 HUMAN 1 -16.0474 10.3168 LLIGTDVSLARLQKA-p Q9Y4B6;S828-p LLIGTDVSLARLQKA 0.181705792202261 0.00854565817657389 0.568 0.449 14.5856891060492 29.3470813235856 0.568 0.449 0.0347881304062335 0.0011622294278182 2.80110194974775 6.22631779795622 Q9Y4B6 VPRBP Q9Y4B6.S828.p_VPRBP Q9Y4B6_S828s _1_1_828_828 Q9Y4B6 Q9Y4B6|Q9Y4B6-2|Q9Y4B6-3 DDB1- and CUL4-associated factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23123.23123.3 14.72 14.72 3.115 3 1 1 0 722.0885 2084.2843 S828s TMT10 816 (R) VSGKPLLIGTDVsLAR (L) VS(0.0)GKPLLIGT(0.0)DVS(0.99)LAR K:TMT10,s:Phosphorylated S DCAF1 170772.9 1 4 1102.1 177.43 HUMAN 1 14.5857 29.3471 LLINNAGSLGDVSKG-p P35270;S103-p LLINNAGSLGDVSKG 0.957246455101486 0.842753171622701 -0.00866666666666666 0.021 0.36966480213323 1.0443843696433 -0.00866666666666666 0.021 0.918403478113371 0.786251637664394 -0.107317954494926 0.284946784392279 P35270 SPR P35270.S103.p_SPR P35270_S103s _1_1_103_103 P35270 P35270 Sepiapterin reductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29133.29133.4 14.79 9.93 5.819 2 1 1 0 513.7937 1972.1843 S103s TMT10 95 (R) LLLINNAGsLGDVSK (G) LLLINNAGS(0.99)LGDVS(0.0)K K:TMT10,s:Phosphorylated S SPR 28333.2 4 1 4043.1 38.7 HUMAN 1 -0.3697 1.0444 LLITPFPSPNSSLTR-p Q8TF40;S272-p LLITPFPSPNSSLTR 0.435048063020442 0.779421969350163 0.114666666666667 -0.0353333333333333 6.65729524261384 1.49929213582951 0.114666666666667 -0.0353333333333333 0.215908865668847 0.708061183109772 1.40088086565303 -0.394779892765332 Q8TF40 FNIP1 Q8TF40.S272.p_FNIP1 Q8TF40_S272s _1_1_272_272 Q8TF40 Q8TF40|Q8TF40-3|J3KNG8|A0A087WX11|Q8TF40-2 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.33640.33640.3 19.34 19.34 2.122 9 1 1 0 828.7713 2404.3285 S272s TMT10 259 (R) SASLSSLLITPFPsPNSSLTR (S) S(0.0)AS(0.0)LS(0.0)S(0.0)LLIT(0.0)PFPS(0.99)PNS(0.0)S(0.0)LT(0.0)R s:Phosphorylated S FNIP1 132549.9 2 9 310.1 372.19 HUMAN 1 6.6573 -1.4993 LLIVQDASERAALIP-p O95772;S193-p LLIVQDASERAALIP 0.494618947762197 0.60052751240576 0.183666666666667 0.118 5.63026864692665 3.00196727983983 0.183666666666667 0.118 0.273509953262809 0.500960255781492 1.2184072972554 0.720710654610662 O95772 STARD3NL O95772.S193.p_STARD3NL O95772_S193s _1_1_193_193 O95772 O95772|O95772-2|C9JKL2 STARD3 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20901.20901.2 11.48 6.18 99 1 1 1 0 726.887 1372.7997 S193s TMT10 186 (R) LLIVQDAsER (A) LLIVQDAS(1.0)ER s:Phosphorylated S STARD3NL 26768.2 1 2 2931.1 65.68 HUMAN 1 5.6303 3.002 LLKAKKLTSDEEGEP-p Q8WVC0;T629-p LLKAKKLTSDEEGEP 0.188778224113783 0.847699542316973 -0.282333333333333 -0.0193333333333333 14.186019987659 1.00736081860021 -0.282333333333333 -0.0193333333333333 0.0381415204264812 0.792983075125928 -2.72713643290203 -0.27569661176138 Q8WVC0 LEO1 Q8WVC0.T629.p_LEO1 Q8WVC0_T629tS630s_2_2_629_630 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11059.11059.2 10.11 10.11 10.107 3 2 2 0 1112.5414 2064.1428 T629t S630s TMT10 627 (K) KLtsDEEGEPSGK (R) KLT(0.99)S(0.99)DEEGEPS(0.0)GK K:TMT10,t:Phosphorylated T,s:Phosphorylated S LEO1 75516.9 8 22 514.1 286.88 HUMAN 1 -14.186 -1.0074 LLKCKRDSFPNFLAC-p P17568;S73-p LLKCKRDSFPNFLAC 0.0425646712541339 0.00678316384314176 -0.824333333333333 -0.531333333333333 30.6226592918162 31.1329985443855 -0.824333333333333 -0.531333333333333 0.000866431176197738 0.000770371389901114 -6.62382883798811 -6.77311269057449 P17568 NDUFB7 P17568.S73.p_NDUFB7 P17568_S73s _1_1_73_73 P17568 P17568 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19372.19372.4 12.49 7.88 99 1 1 1 0 603.3153 2330.2716 S73s TMT10 69 (K) CKRDsFPNFLACK (Q) CKRDS(1.0)FPNFLACK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NDUFB7 16629.9 1 1 6301.1 12.49 HUMAN 1 -30.6227 -31.133 LLKGQQASPFVLRAR-p Q9BUE0;S66-p LLKGQQASPFVLRAR 0.591957101888505 0.0464643211238763 0.087 0.314333333333333 4.19627419262498 17.8307457136406 0.087 0.314333333333333 0.380515700315147 0.0164787941494725 0.954466536708071 3.42532111989514 Q9BUE0 MED18 Q9BUE0.S66.p_MED18 Q9BUE0_S66s _1_1_66_66 Q9BUE0 Q9BUE0 Mediator of RNA polymerase II transcription subunit 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15097.15097.2 15.93 10.19 99 1 1 1 0 706.3677 1331.7633 S66s TMT10 62 (K) GQQAsPFVLR (A) GQQAS(1.0)PFVLR s:Phosphorylated S MED18 23776.4 2 1 5836.1 15.93 HUMAN 1 4.1963 17.8307 LLKHAEATLGSGNLR-p Q9H8S9;T35-p LLKHAEATLGSGNLR 0.317067114607464 0.406840733051517 -0.193333333333333 0.176666666666667 9.34129606921277 5.19819054687088 -0.193333333333333 0.176666666666667 0.116377866999027 0.302121022122072 -1.86746060340399 1.14001840279907 Q9H8S9 MOB1A Q9H8S9.T35.p_MOB1A Q9H8S9_T35t _1_1_35_35 Q9H8S9 Q7L9L4-2|Q9H8S9|Q9H8S9-2 MOB kinase activator 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7168.7168.3 12.59 12.59 4.358 2 1 1 0 512.2582 1454.7913 T35t TMT10 31 (K) HAEAtLGSGNLR (Q) HAEAT(0.99)LGS(0.0)GNLR t:Phosphorylated T MOB1A 25250.5 1 4 5360.1 20.1 HUMAN 1 -9.3413 5.1982 LLKIEGVYARDETEF-p P18077;Y34-p LLKIEGVYARDETEF 0.302658799396577 0.56853924120101 -0.146333333333333 0.068 9.72568929554481 3.30540109523554 -0.146333333333333 0.068 0.106519978582567 0.46715380491376 -1.93409025846167 0.781672232371728 P18077 RPL35A P18077.Y34.p_RPL35A P18077_Y34y _1_1_34_34 P18077 P18077|F8WB72|F8WBS5 60S ribosomal protein L35a GG20160819_MSz_CCLE_T4D7_pY_Injection_02.22041.22041.4 14.11 14.11 14.114 3 1 1 0 646.8361 2504.3549 Y34y TMT10 30 (K) IEGVyARDETEFYLGKR (C) IEGVY(0.99)ARDET(0.0)EFY(0.0)LGKR K:TMT10,y:Phosphorylated Y RPL35A 12594.5 2 1 122.1 25.21 HUMAN 1 -9.7257 3.3054 LLKLSPATPTSEGPK-p Q8N1G0;T377-p LLKLSPATPTSEGPK 0.394657390059613 0.0620484821976619 -0.132666666666667 0.23 7.45155556656213 16.0695647605604 -0.132666666666667 0.23 0.179822670653827 0.0247197186765249 -1.53984679054639 3.07937125326077 Q8N1G0 ZNF687 Q8N1G0.T377.p_ZNF687 Q8N1G0_T377t _1_1_377_377 Q8N1G0 Q8N1G0|Q8N1G0-2|F8WCX2 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12680.12680.3 10.08 10.08 1.657 4 1 1 0 574.9737 1642.9416 T377t TMT10 373 (K) LSPAtPTSEGPK (V) LS(0.0)PAT(0.99)PT(0.0)S(0.0)EGPK K:TMT10,t:Phosphorylated T ZNF687 131979.7 3 11 156.1 501.88 HUMAN 1 -7.4516 16.0696 LLKQGQYSPMAIEEQ-p P25705;S477-p LLKQGQYSPMAIEEQ 0.2831089969522 0.12074667954588 0.174333333333333 0.165666666666667 10.3607400963136 12.1037003045761 0.174333333333333 0.165666666666667 0.09202927281086 0.0616069870253646 2.04445899953968 2.34955744627791 P25705 ATP5A1 P25705.S477.p_ATP5A1 P25705_S477s _1_1_477_477 P25705 P25705|P25705-3|P25705-2 ATP synthase subunit alpha, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.34885.35002.3 15.55 15.55 10.471 3 1 1 0 873.4335 2538.3224 S477s TMT10 473 (K) QGQYsPMAIEEQVAVIYAGVR (G) QGQY(0.0)S(0.99)PMAIEEQVAVIY(0.0)AGVR s:Phosphorylated S ATP5A1 59863.7 2 7 1547.1 132.65 HUMAN 1 10.3607 12.1037 LLKRLSLSTSKLNSL-p P54886;S429-p LLKRLSLSTSKLNSL 0.321750322527814 0.0146627609288476 -0.146 0.354 9.21787693651209 25.3965880306663 -0.146 0.354 0.119732570504587 0.00288629818941485 -1.84608516121235 5.13838033825503 P54886 ALDH18A1 P54886.S429.p_ALDH18A1 P54886_S429s _1_1_429_429 P54886 P54886|P54886-2 Delta-1-pyrroline-5-carboxylate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16332.16332.2 10.05 5.74 1.118 4 1 1 0 637.3619 1193.7506 S429s TMT10 426 (R) LSLsTSK (L) LS(0.0)LS(0.99)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ALDH18A1 88042.4 4 5 2259.1 91 HUMAN 1 -9.2179 25.3966 LLKSKDASLVTNEDH-p P49454;S773-p LLKSKDASLVTNEDH 0.977340382035449 0.00265649453361622 -0.00600000000000001 -0.826333333333333 0.19509915900213 39.1511410114568 -0.006 -0.826333333333334 0.956070865565553 0.000121586651699118 -0.0576836113136527 -9.75603311438925 P49454 CENPF P49454.S773.p_CENPF P49454_S773s _1_1_773_773 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6812.6812.4 15.86 15.86 1.421 3 1 1 0 535.2719 2058.098 S773s TMT10 769 (K) SKDAsLVTNEDHQR (S) S(0.0)KDAS(0.99)LVT(0.0)NEDHQR K:TMT10,s:Phosphorylated S CENPF 371067.2 2 6 47.1 771.73 HUMAN 1 -0.1951 -39.1511 LLLDALRSPGLRALE-p Q8N2G8;S192-p LLLDALRSPGLRALE 0.525170023338528 0.708658585868283 -0.0903333333333333 -0.105333333333333 5.17364335712455 2.05659961636295 -0.0903333333333333 -0.105333333333333 0.303833505446842 0.62278771671946 -1.13578602888781 -0.521239110412263 Q8N2G8 GHDC Q8N2G8.S192.p_GHDC Q8N2G8_S192s _1_1_192_192 Q8N2G8 Q8N2G8|Q8N2G8-3|K7ESN3 GH3 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26648.26648.3 13.09 13.09 99 1 1 1 0 568.6642 1624.0107 S192s TMT10 184 (R) ALLLDALRsPGLR (A) ALLLDALRS(1.0)PGLR s:Phosphorylated S GHDC 58092.4 1 3 3429.1 51.3 HUMAN 1 -5.1736 -2.0566 LLLERAQTPENKPGH-p F5H527;T822-p LLLERAQTPENKPGH 0.271908041557881 0.0511642402924895 -0.174333333333333 -0.270333333333333 10.7136450988287 17.2355187392639 -0.174333333333333 -0.270333333333333 0.0848468044125561 0.0188994047540945 -2.10601467977738 -3.30660377140928 F5H527 SSH2 F5H527.T822.p_SSH2 F5H527_T822t _1_1_822_822 F5H527 F5H527|Q76I76 Protein phosphatase Slingshot homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11439.11439.4 14.4 12.82 3.868 3 1 1 0 920.4435 3598.7721 T822t TMT10 820 (R) AQtPENKPGHMEQDEDSCTAQPELAK (D) AQT(0.99)PENKPGHMEQDEDS(0.0)CT(0.0)AQPELAK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T SSH2 162969.8 3 6 998.1 190.13 HUMAN 1 -10.7136 -17.2355 LLLPEDDTRDNVFYY-p P22223;T694-p LLLPEDDTRDNVFYY 0.23797684518109 0.809588887741656 0.175333333333333 0.0296666666666667 11.9356064318275 1.28531101274257 0.175333333333333 0.0296666666666667 0.0640382354838656 0.743821793444278 2.32091815809332 0.343954781822964 P22223 CDH3 P22223.T694.p_CDH3 P22223_T694t _1_1_694_694 P22223 P22223|P22223-2 Cadherin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26120.26120.5 33.44 33.44 9.607 5 1 1 0 1002.2802 4927.395 T694t TMT10 683 (K) IKEPLLLPEDDtRDNVFYYGEEGGGEEDQDYDITQLHR (G) IKEPLLLPEDDT(0.99)RDNVFY(0.0)Y(0.0)GEEGGGEEDQDY(0.0)DIT(0.0)QLHR K:TMT10,t:Phosphorylated T CDH3 91930.2 2 2 4082.1 37.96 HUMAN 1 11.9356 1.2853 LLLPRSHSDPGITTS-p P81408-4;S494-p LLLPRSHSDPGITTS 0.219634467679689 0.0168705810190433 -0.194 -0.384666666666667 12.676964207788 24.4646146922157 -0.194 -0.384666666666667 0.0539887881445999 0.00357716135885911 -2.45301726900819 -4.90349563671453 P81408 FAM189B P81408.4.S494.p_FAM189B P81408-4_S494s _1_1_494_494 P81408-4 P81408-4|P81408-3|P81408-2 Isoform 3 of Protein FAM189B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17264.17264.3 19.31 14.03 2.199 9 1 1 0 984.8061 2872.4365 S494s TMT10 492 (R) SHsDPGITTSSDTADFRDLYTK (V) S(0.0)HS(0.99)DPGIT(0.0)T(0.0)S(0.0)S(0.0)DT(0.0)ADFRDLY(0.0)T(0.0)K K:TMT10,s:Phosphorylated S FAM189B 73136.4 5 1 2672.1 74.31 HUMAN 1 -12.677 -24.4646 LLLQLLGSPGRRYYS-p P10515;S80-p LLLQLLGSPGRRYYS 0.926672745884924 0.0616110019365502 0.0153333333333333 -0.242333333333333 0.653396348144349 16.1152905123393 0.0153333333333333 -0.239615834269936 0.860320685516478 0.0244608164499017 0.184524222896499 -3.08815707654811 P10515 DLAT P10515.S80.p_DLAT P10515_S80s _1_1_80_80 P10515 P10515|E9PEJ4 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29960.29960.3 7.5 7.5 99 1 1 1 0 544.6569 1551.9896 S80s TMT10 73 (R) LLLQLLGsPGRR (Y) LLLQLLGS(1.0)PGRR s:Phosphorylated S DLAT 69508.9 1 1 2952.1 64.89 HUMAN 1 0.6534 -16.1153 LLLRRGFSDSGGGPP-p Q9H307;S66-p LLLRRGFSDSGGGPP 0.0522770283900715 0.0346460028391355 0.442 0.271333333333333 27.839015598398 19.6718096291342 0.442 0.271333333333333 0.00164474449001149 0.0107849723765755 5.80064857992634 3.80538200317436 Q9H307 PNN Q9H307.S66.p_PNN Q9H307_S66s _1_1_66_66 Q9H307 Q9H307|G3V579|G3V5F0 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11474.11474.2 15.91 15.91 1.295 2 1 1 0 807.9009 1534.8266 S66s TMT10 64 (R) GFsDSGGGPPAK (Q) GFS(0.99)DS(0.0)GGGPPAK K:TMT10,s:Phosphorylated S PNN 81726.4 9 1 180.1 480.36 HUMAN 1 27.839 19.6718 LLLSTEESV______-p Q05513;S591-p LLLSTEESV______ 0.863785322918 0.460249517291186 0.0256666666666667 -0.0706666666666667 1.23946991218774 4.49398441775558 0.0256666666666667 -0.0706666666666667 0.751714640625294 0.355305195628262 0.332913315005448 -1.01026661301137 Q05513 PRKCZ Q05513.S591.p_PRKCZ Q05513_S591s _1_1_591_591 Q05513 Q05513|Q05513-3|Q05513-2 Protein kinase C zeta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.37589.37589.3 23.04 19.89 1.105 5 1 1 0 990.1373 2888.4291 S591s TMT10 570 (R) IDQSEFEGFEYINPLLLSTEEsV (-) IDQS(0.0)EFEGFEY(0.0)INPLLLS(0.0)T(0.0)EES(0.99)V s:Phosphorylated S PRKCZ 68571.6 5 5 859.1 210.7 HUMAN 1 1.2395 -4.494 LLLVGDRSPVPSPGS-p Q8N3F8;S612-p LLLVGDRSPVPSPGS 0.227208255675081 0.0472950756827234 0.193 0.237 12.3704705116322 17.7314170258247 0.193 0.237 0.0579365924923808 0.0168600282283161 2.39822340279471 3.40537621743175 Q8N3F8 MICALL1 Q8N3F8.S612.p_MICALL1 Q8N3F8_S612s _1_1_612_612 Q8N3F8 Q8N3F8 MICAL-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23057.23057.4 18.55 18.55 2.666 10 1 1 0 1145.0974 4497.4176 S612s Hydrogen 587 (R) GSSGPQPAKPCSGATPTPLLLVGDRsPVPSPGSSSPQLQVK (S) GS(0.0)S(0.0)GPQPAKPCS(0.0)GAT(0.0)PT(0.0)PLLLVGDRS(0.99)PVPS(0.0)PGS(0.0)S(0.0)S(0.0)PQLQVK K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S MICALL1 94409.4 3 8 755.1 231.25 HUMAN 1 12.3705 17.7314 LLMRGYYSPGIVSTR-p Q12789;S1653-p LLMRGYYSPGIVSTR 0.955092767066371 0.00633361180202018 -0.011 -0.585666666666667 0.39167608375948 31.6533155921048 -0.011 -0.585666666666667 0.913760523484937 0.000683389718776367 -0.113454743977705 -6.9395465088663 Q12789 GTF3C1 Q12789.S1653.p_GTF3C1 Q12789_S1653s _1_1_1653_1653 Q12789 Q12789|Q12789-3 General transcription factor 3C polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14782.14782.2 13.95 13.95 1.735 5 1 1 0 754.8707 1428.7684 S1653s TMT10 1650 (R) GYYsPGIVSTR (N) GY(0.0)Y(0.0)S(0.99)PGIVS(0.0)T(0.0)R s:Phosphorylated S GTF3C1 241209.8 4 10 225.1 425.73 HUMAN 1 -0.3917 -31.6533 LLNGRKYSDSSLPPS-p Q68CP9;S1300-p LLNGRKYSDSSLPPS 0.0412311366109555 0.0244696642922072 -0.517 -0.320333333333333 30.8985148019909 21.9435555760862 -0.517 -0.320333333333333 0.000813108535056681 0.00639211297857525 -6.71022562735121 -4.30449701282659 Q68CP9 ARID2 Q68CP9.S1300.p_ARID2 Q68CP9_S1300s _1_1_1300_1300 Q68CP9 Q68CP9|Q68CP9-3|F8WCU9|F8W108 AT-rich interactive domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10338.10750.3 15.21 9.27 2.139 6 1 1 0 745.3941 2154.201 S1300s TMT10 1298 (R) KYsDSSLPPSNSGK (I) KY(0.0)S(0.99)DS(0.0)S(0.0)LPPS(0.0)NS(0.0)GK K:TMT10,s:Phosphorylated S ARID2 199041.9 4 3 1654.1 123.29 HUMAN 1 -30.8985 -21.9436 LLNLHKKSWMEGLTL-p O00487;S224-p LLNLHKKSWMEGLTL 0.419837642013724 0.128788764911753 -0.210333333333333 0.198 6.95578006517575 11.7356569500227 -0.210333333333333 0.198 0.201568188813014 0.0670554845316466 -1.45327050595272 2.28442297981735 O00487 PSMD14 O00487.S224.p_PSMD14 O00487_S224s _1_1_224_224 O00487 O00487 26S proteasome non-ATPase regulatory subunit 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24662.24662.3 23.93 23.93 4.775 4 1 1 0 841.3879 2442.1834 S224s TMT10 224 (K) sWMEGLTLQDYSEHCK (H) S(0.99)WMEGLT(0.0)LQDY(0.0)S(0.0)EHCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PSMD14 34747.6 2 1 4038.1 38.76 HUMAN 1 -6.9558 11.7357 LLNQSEGSRETLLHQ-p Q6ZU80;S301-p LLNQSEGSRETLLHQ 0.485768497509106 0.244411945828562 0.098 0.131666666666667 5.77841837104327 8.06341220112177 0.098 0.131666666666667 0.264337125431204 0.156191997810262 1.24498825761462 1.64563321989039 Q6ZU80 CEP128 Q6ZU80.S301.p_CEP128 Q6ZU80_S301s _1_1_301_301 Q6ZU80 Q6ZU80|Q6ZU80-1|Q6ZU80-3 Centrosomal protein of 128 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22300.22300.3 15.85 8.65 1.18 3 1 1 0 887.458 2580.3943 S301s TMT10 294 (R) LLNQSEGsRETLLHQVEELR (T) LLNQS(0.0)EGS(0.99)RET(0.0)LLHQVEELR s:Phosphorylated S CEP128 128640.5 1 7 1261.1 161 HUMAN 1 5.7784 8.0634 LLPGELASPSQALGA-p Q8TBC5-3;S224-p LLPGELASPSQALGA 0.449967305790725 0.473452883490253 0.223666666666667 0.119 6.40728236848577 4.32851557745948 0.223666666666667 0.119 0.228702948219407 0.369103737009188 1.35680772885167 0.979251471461844 Q8TBC5 ZSCAN18 Q8TBC5.3.S224.p_ZSCAN18 Q8TBC5-3_S224s_1_1_224_224 Q8TBC5-3 Q8TBC5-3 Isoform 3 of Zinc finger and SCAN domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36044.36044.4 18.92 18.92 1.257 5 1 1 0 1240.3782 4862.5389 M213m S224s TMT10 212 (R) HmDPLLLPGELAsPSQALGAGEIPAPSETPWLSPDPLFLEQRR (V) HM(1.0)DPLLLPGELAS(0.99)PS(0.0)QALGAGEIPAPS(0.0)ET(0.0)PWLS(0.0)PDPLFLEQRR m:Oxidized methionine,s:Phosphorylated S ZSCAN18 61394 7 3 1147.1 172.79 HUMAN 1 6.4073 4.3285 LLPINNGSKENGIHE-p Q13596-3;S72-p LLPINNGSKENGIHE 0.164162708749184 0.013701487429064 -0.412 0.365 15.7269504051324 25.8809756864259 -0.412 0.365 0.0267488404000264 0.00258168012495807 -3.01593572184586 5.26354400358721 Q13596 SNX1 Q13596.3.S72.p_SNX1 Q13596-3_S72s_1_1_72_72 Q13596-3 Q13596-3|Q13596-2|H0YKD5|J3KPH4 Isoform 3 of Sorting nexin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26369.26802.3 12.84 12.84 0.637 4 1 1 0 633.0199 1816.0944 N70n S72s TMT10 61 (K) ITTSLLPINnGsK (E) IT(0.0)T(0.0)S(0.0)LLPIN(0.50)N(0.50)GS(0.99)K K:TMT10,n:Deamidated,s:Phosphorylated S SNX1 63252.3 8 7 1560.1 131.56 HUMAN 1 -15.727 25.881 LLPKTPISPLKTGVS-p Q9NQW6;S323-p LLPKTPISPLKTGVS 0.328161595452665 0.00278908336687029 0.783 -1.18866666666667 9.04850206046606 38.6329428567097 0.783 -1.18866666666667 0.124494393547851 0.00013699531469397 1.81675927851547 -9.53316032691961 Q9NQW6 ANLN Q9NQW6.S323.p_ANLN Q9NQW6_S323s _1_1_323_323 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22976.22976.4 19.03 19.03 1.367 3 1 1 0 719.6464 2795.5944 S323s TMT10 308 (K) SCEGQNPELLPKTPIsPLK (T) S(0.0)CEGQNPELLPKT(0.0)PIS(0.99)PLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANLN 125566 11 22 68.1 675.08 HUMAN 1 9.0485 -38.6329 LLPLPQPYQAQGVLA-p A0A0A0MR66;Y341-p LLPLPQPYQAQGVLA 0.540716629644627 0.206334084894557 0.0806666666666667 0.198333333333333 4.92699812460052 9.01668877334303 0.0806666666666667 0.198333333333333 0.321588261230813 0.125409698186091 1.0906629861306 1.81059924070511 A0A0A0MR66 RBM10 A0A0A0MR66.Y341.p_RBM10 A0A0A0MR66_Y341y_1_1_341_341 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2|P98175-3|P98175-4 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.35321.35321.4 13.02 7.03 1.603 8 1 1 0 1183.604 4649.426 Y341y N362n N364n TMT10 329 (R) ELSQGLLPLPQPyQAQGVLASQALSQGSEPSSEnAnDTIILR (N) ELS(0.0)QGLLPLPQPY(0.99)QAQGVLAS(0.0)QALS(0.0)QGS(0.0)EPS(0.0)S(0.0)EN(1.0)AN(1.0)DT(0.0)IILR y:Phosphorylated Y,n:Deamidated RBM10 110706.4 3 7 270.1 394.36 HUMAN 1 4.927 9.0167 LLPPEPPSPARAPVP-p O15357;S1003-p LLPPEPPSPARAPVP 0.878269660579519 0.313293307175524 0.0226666666666667 -0.0963333333333333 1.10867146996972 6.66330295248299 0.0226666666666667 -0.0963333333333333 0.774698746045467 0.215610399737995 0.300919695948366 -1.40156892873668 O15357 INPPL1 O15357.S1003.p_INPPL1 O15357_S1003s _1_1_1003_1003 O15357 O15357|A0A0A0MTP6|O15357-2 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30607.30810.4 31.25 25.94 4.565 6 1 1 0 1099.0758 4313.3123 S1003s TMT10 979 (K) NSFNNPAYYVLEGVPHQLLPPEPPsPARAPVPSATK (N) NS(0.0)FNNPAY(0.0)Y(0.0)VLEGVPHQLLPPEPPS(0.99)PARAPVPS(0.0)AT(0.0)K K:TMT10,s:Phosphorylated S INPPL1 139395 14 3 1829.1 112.43 HUMAN 1 1.1087 -6.6633 LLPQTPPSPRNLIPH-p Q86X27;S329-p LLPQTPPSPRNLIPH 0.424154222594321 0.0896814526582794 0.114333333333333 -0.194333333333333 6.86604818120267 13.8600913583007 0.114333333333333 -0.194333333333333 0.205776218426564 0.0411141072239213 1.43754467862923 -2.66568705410143 Q86X27 RALGPS2 Q86X27.S329.p_RALGPS2 Q86X27_T326tS329s_2_2_326_329 Q86X27 Q86X27|Q86X27-3 Ras-specific guanine nucleotide-releasing factor RalGPS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20428.20844.3 20.97 20.97 20.973 3 2 2 0 694.0086 1920.0752 T326t S329s TMT10 315 (K) SVAAEGALLPQtPPsPR (N) S(0.0)VAAEGALLPQT(0.99)PPS(0.99)PR t:Phosphorylated T,s:Phosphorylated S RALGPS2 65508.3 4 15 614.1 261.34 HUMAN 1 6.866 -13.8601 LLPRMEDSGPLRDIK-p Q9H6A9;S156-p LLPRMEDSGPLRDIK 0.168210601929357 0.0527461267231168 -0.271333333333333 -0.31 15.4508528650536 17.0464053016592 -0.271333333333333 -0.31 0.0285045844111588 0.0197405600574718 -2.96344448717847 -3.26928065512141 Q9H6A9 PCNXL3 Q9H6A9.S156.p_PCNXL3 Q9H6A9_S156s _1_1_156_156 Q9H6A9 Q9H6A9|Q9H6A9-2 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17084.17084.2 10.29 5.69 99 1 1 1 0 899.9636 1718.9511 S156s TMT10 153 (R) MEDsGPLRDIK (E) MEDS(1.0)GPLRDIK K:TMT10,s:Phosphorylated S PCNX3 224430.8 2 3 168.1 492.45 HUMAN 1 -15.4509 -17.0464 LLPRRPPSSSSSSSA-p B4DTS2;S236-p LLPRRPPSSSSSSSA 0.112241107364691 0.0169943493205494 -0.296333333333333 -0.501666666666667 19.8350318964676 24.4201025630569 -0.296333333333333 -0.501666666666667 0.0103871597361465 0.00361401327679085 -3.84363554597199 -4.89246748413213 B4DTS2 NotFound B4DTS2.S236.p_NotFound B4DTS2_S236s _1_1_236_236 B4DTS2 B4DTS2|Q9BZL6|Q9BZL6-2 Serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12366.12366.4 16.18 11.39 1.22 11 1 1 0 734.3715 2854.4947 S236s TMT10 233 (R) RPPsSSSSSSASSYTGRPIELDK (M) RPPS(0.99)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)AS(0.0)S(0.0)Y(0.0)T(0.0)GRPIELDK K:TMT10,s:Phosphorylated S PRKD2 99053.8 1 4 1565.2 131.21 HUMAN 1 -19.835 -24.4201 LLPSFQDSEDDDDIL-p Q6P0N0;S1008-p LLPSFQDSEDDDDIL 0.292579056536687 0.0107737437350287 0.236333333333333 -0.556333333333333 10.0706518277112 27.5819622464346 0.236333333333333 -0.556333333333333 0.0983863427721908 0.0017450335268522 1.9939878202253 -5.72073911244124 Q6P0N0 MIS18BP1 Q6P0N0.S1008.p_MIS18BP1 Q6P0N0_S1008s _1_1_1008_1008 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36669.36669.4 21.69 21.1 4.034 6 1 1 0 1167.859 4588.4351 S1008s TMT10 1000 (R) ILLPSFQDsEDDDDILPNMDKNPTTPSSVIFPLVK (T) ILLPS(0.0)FQDS(0.99)EDDDDILPNMDKNPT(0.0)T(0.0)PS(0.0)S(0.0)VIFPLVK K:TMT10,s:Phosphorylated S MIS18BP1 129996 19 33 54.1 728.39 HUMAN 1 10.0707 -27.582 LLPSSVRSAPSSAPS-p Q9UKF7;S270-p LLPSSVRSAPSSAPS 0.251704693334651 0.10988033291554 0.181 0.174333333333333 11.4287865321995 12.666428850039 0.181 0.174333333333333 0.0719650028254988 0.0541199161423476 2.23140714979527 2.44982623683836 Q9UKF7 PITPNC1 Q9UKF7.S270.p_PITPNC1 Q9UKF7_S270s _1_1_270_270 Q9UKF7 Q9UKF7 Cytoplasmic phosphatidylinositol transfer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28904.28904.4 14.37 10.08 2.083 8 1 1 0 706.8661 2744.4758 S270s TMT10 270 (R) sAPSSAPSTPLSTDAPEFLSVPK (D) S(0.99)APS(0.0)S(0.0)APS(0.0)T(0.0)PLS(0.0)T(0.0)DAPEFLS(0.0)VPK K:TMT10,s:Phosphorylated S PITPNC1 38729.1 2 1 5805.1 16.13 HUMAN 1 11.4288 12.6664 LLPTPPLSPSRRSGL-p P01106-2;S77-p LLPTPPLSPSRRSGL 0.0392760190421918 0.0061233383809166 -0.649666666666667 -0.545333333333333 31.7297662066831 31.8959818862257 -0.649666666666667 -0.545333333333333 0.000671464998861579 0.000646251867909796 -6.97616739398562 -7.01831374382344 P01106 MYC P01106.2.S77.p_MYC P01106-2_S77s _1_1_77_77 P01106-2 P04198|P01106-2|A0A087WUS5|H0YBT0|A0A0B4J1R1 Isoform 2 of Myc proto-oncogene protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26021.26021.3 15.7 15.7 1.268 3 1 1 0 707.4025 2040.2258 S77s TMT10 67 (K) KFELLPTPPLsPSR (R) KFELLPT(0.0)PPLS(0.99)PS(0.0)R K:TMT10,s:Phosphorylated S MYC 51134.7 9 1 2515.1 80.3 HUMAN 1 -31.7298 -31.896 LLQARRASGDVASCV-p Q8IUW3;S189-p LLQARRASGDVASCV 0.533449520540402 0.144894526954526 0.163 -0.151 5.05194517066692 11.0499532876283 0.163 -0.151 0.312467953438781 0.0785244080587996 1.11356887796366 -2.16388237577763 Q8IUW3 SPATA2L Q8IUW3.S189.p_SPATA2L Q8IUW3_S189s _1_1_189_189 Q8IUW3 Q8IUW3 Spermatogenesis-associated protein 2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18087.18087.3 14.69 14.69 6.571 2 1 1 0 705.0126 2033.0548 S189s TMT10 187 (R) RAsGDVASCVAWLQQR (L) RAS(0.99)GDVAS(0.0)CVAWLQQR C:Carbamidomethylation,s:Phosphorylated S SPATA2L 46862.4 1 1 6009.1 14.69 HUMAN 1 5.0519 -11.05 LLQEEDESPRSVLEE-p P61966;S147-p LLQEEDESPRSVLEE 0.318436709095685 0.0320619890330899 0.146333333333333 0.420666666666667 9.30079650301758 20.1719971991342 0.146333333333333 0.420666666666667 0.117468209660938 0.00961170161396662 1.8604455951553 3.91225931313692 P61966 AP1S1 P61966.S147.p_AP1S1 P61966_S147s _1_1_147_147 P61966 P61966 AP-1 complex subunit sigma-1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.36693.36693.3 23.45 18.3 1.271 2 1 1 0 1027.8289 3001.4873 S147s TMT10 134 (K) AIEQADLLQEEDEsPRSVLEEMGLA (-) AIEQADLLQEEDES(0.99)PRS(0.0)VLEEMGLA s:Phosphorylated S AP1S1 18960.9 4 1 4052.1 38.53 HUMAN 1 9.3008 20.172 LLQFALESPAKSPAS-p Q9NS91;S99-p LLQFALESPAKSPAS 0.78149643092872 0.00352761570401347 -0.055 -1.14966666666667 2.05684791817692 36.64168072629 -0.055 -1.14966666666667 0.62275211071808 0.000216686536232215 -0.521354935042372 -8.71867810561772 Q9NS91 RAD18 Q9NS91.S99.p_RAD18 Q9NS91_S99s _1_1_99_99 Q9NS91 Q9NS91|F8WE49 E3 ubiquitin-protein ligase RAD18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19617.19617.4 25.56 19.9 5.159 6 1 1 0 742.4068 2886.6292 S99s TMT10 90 (R) NHLLQFALEsPAKSPASSSSK (N) NHLLQFALES(0.99)PAKS(0.0)PAS(0.0)S(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S RAD18 57077.5 13 1 1349.1 151 HUMAN 1 -2.0568 -36.6417 LLQGKGDSEHKRKKV-p P35579;S1243-p LLQGKGDSEHKRKKV 0.41330138595586 0.52882677400328 -0.112 -0.085 7.07884956306621 3.71999988271181 -0.112 -0.085 0.195936363606654 0.424619575413845 -1.47480847660842 -0.863075254606006 P35579 MYH9 P35579.S1243.p_MYH9 P35579_S1243s _1_1_1243_1243 P35579 P35579 Myosin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12216.12216.4 11.88 11.88 99 1 1 1 0 520.2955 1998.1951 S1243s TMT10 1235 (K) VLLQGKGDsEHK (R) VLLQGKGDS(1.0)EHK K:TMT10,s:Phosphorylated S MYH9 227783.5 3 28 296.1 379.15 HUMAN 1 -7.0788 -3.72 LLQKAVITPDFEKNH-p Q5QJE6;T610-p LLQKAVITPDFEKNH 0.171396449036957 0.0112041909396015 -0.226333333333333 -0.414666666666667 15.2627394215577 27.3103586628894 -0.226333333333333 -0.414666666666667 0.0297663824777586 0.0018576510343074 -2.92787497116853 -5.64582906288714 Q5QJE6 DNTTIP2 Q5QJE6.T610.p_DNTTIP2 Q5QJE6_T610t _1_1_610_610 Q5QJE6 Q5QJE6 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20402.20402.2 11.53 11.53 99 1 1 1 0 779.422 1477.8667 T610t TMT10 607 (K) AVItPDFEK (N) AVIT(1.0)PDFEK K:TMT10,t:Phosphorylated T DNTTIP2 84866.9 2 18 448.1 309.47 HUMAN 1 -15.2627 -27.3104 LLQKLRLTPQHDQIQ-p Q9NPI6;T401-p LLQKLRLTPQHDQIQ 0.144470787204033 0.0556047179473765 0.263 0.267 17.1545293744789 16.7202509266835 0.263 0.267 0.0192551569330275 0.0212801608990834 3.29313291541791 3.20534470551808 Q9NPI6 DCP1A Q9NPI6.T401.p_DCP1A Q9NPI6_T401t _1_1_401_401 Q9NPI6 Q9NPI6|Q9NPI6-2 mRNA-decapping enzyme 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16031.16031.5 16.44 16.44 9.477 2 1 1 0 503.0832 2431.4185 T401t TMT10 398 (K) LRLtPQHDQIQTQPLGK (G) LRLT(0.99)PQHDQIQT(0.0)QPLGK K:TMT10,t:Phosphorylated T DCP1A 63479.5 5 9 344.1 352.95 HUMAN 1 17.1545 16.7203 LLQNCQVSEEDGRGE-p E7ETA6;S190-p LLQNCQVSEEDGRGE 0.194367047888858 0.605831674170796 0.207 -0.052 13.8775934943068 2.95403785236146 0.207 -0.052 0.0409487501440282 0.506519552794178 2.67047185310637 -0.710962396124934 E7ETA6 PCM1 E7ETA6.S190.p_PCM1 E7ETA6_S190s _1_1_190_190 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6|Q15154-3|E9PGW9 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28818.28818.5 26.07 26.07 5.268 6 1 1 0 856.0001 4196.0073 S190s TMT10 173 (K) ELFASALSNDLLQNCQVsEEDGRGEPAMESSQIVSR (L) ELFAS(0.0)ALS(0.0)NDLLQNCQVS(0.99)EEDGRGEPAMES(0.0)S(0.0)QIVS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PCM1 229381.8 6 10 13.1 1159.95 HUMAN 1 13.8776 -2.954 LLQTCFSSPADDSMD-p Q9NZL4-3;S397-p LLQTCFSSPADDSMD 0.758432602581159 0.967738883207385 -0.0436666666666667 0.00466666666666669 2.30048784560884 0.201796559960908 -0.0436666666666667 0.0046666666666667 0.588777513907834 0.954597612865306 -0.574364802138408 0.0596153638710668 Q9NZL4 HSPBP1 Q9NZL4.3.S397.p_HSPBP1 Q9NZL4-3_S397s _1_1_397_397 Q9NZL4-3 Q9NZL4|Q9NZL4-2|Q9NZL4-3 Isoform 3 of Hsp70-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21957.21957.2 15.74 13.67 1.113 4 1 1 0 1076.4672 2071.9626 S397s TMT10 390 (K) LLQTCFSsPADDSMDR (-) LLQT(0.0)CFS(0.0)S(0.99)PADDS(0.0)MDR C:Carbamidomethylation,s:Phosphorylated S HSPBP1 45271.9 8 1 5646.1 17.5 HUMAN 1 -2.3005 0.2018 LLQTTNNSPMNSKPQ-p O00178;S580-p LLQTTNNSPMNSKPQ 0.306187730404987 0.145836689509702 0.16 -0.163 9.63308599874176 11.0152470426257 0.16 -0.163 0.10881565989891 0.0791544427394202 1.91802934623305 -2.15780633837524 O00178 GTPBP1 O00178.S580.p_GTPBP1 O00178_S580s _1_1_580_580 O00178 O00178 GTP-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17705.17705.5 16.37 16.37 1.168 4 1 1 0 562.7103 2729.5587 S580s TMT10 573 (K) LLQTTNNsPMNSKPQQIK (M) LLQT(0.0)T(0.0)NNS(0.99)PMNS(0.0)KPQQIK K:TMT10,s:Phosphorylated S GTPBP1 73080.2 5 7 2114.1 97.01 HUMAN 1 9.6331 -11.0152 LLQVQHASKQITADK-p P05141;S42-p LLQVQHASKQITADK 0.344105576941701 0.34669539887872 0.135333333333333 0.165333333333333 8.60393829277252 6.09811395015232 0.135333333333333 0.165333333333333 0.137913306445405 0.245577517579345 1.73980254720316 1.30170853876366 P05141 SLC25A5 P05141.S42.p_SLC25A5 P05141_S42s _1_1_42_42 P05141 P12235|P05141|P12236|V9GYG0 ADP/ATP translocase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18125.18125.3 13.68 13.68 99 1 1 1 0 558.9957 1595.0045 S42s TMT10 34 (K) LLLQVQHAsK (Q) LLLQVQHAS(1.0)K K:TMT10,s:Phosphorylated S SLC25A5 33079.8 2 4 2574.1 78.09 HUMAN 1 8.6039 6.0981 LLRAELQSLEQSHLK-p Q8TDY2;S982-p LLRAELQSLEQSHLK 0.0946777628850844 0.0136990633119768 0.377333333333333 0.557666666666667 21.789599385931 25.8842624104996 0.377333333333333 0.557666666666667 0.00662277592547115 0.00257972705841672 4.27398118097522 5.26440066958278 Q8TDY2 RB1CC1 Q8TDY2.S982.p_RB1CC1 Q8TDY2_S982s _1_1_982_982 Q8TDY2 Q8TDY2 RB1-inducible coiled-coil protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16345.16345.3 14.49 11.05 3.439 2 1 1 0 641.0117 1841.0533 S982s TMT10 978 (R) AELQsLEQSHLK (E) AELQS(0.99)LEQS(0.0)HLK K:TMT10,s:Phosphorylated S RB1CC1 185198.6 1 12 707.1 238.96 HUMAN 1 21.7896 25.8843 LLREEGASPLDFD__-p P46459;S739-p LLREEGASPLDFD__ 0.395179917614244 0.0157813938405238 -0.119 0.357 7.44300049469791 24.9047742018626 -0.119 0.357 0.180177248516548 0.00323238125680788 -1.53835670728138 5.01347297010345 P46459 NSF P46459.S739.p_NSF P46459_S739s _1_1_739_739 P46459 P46459|I3L0N3 Vesicle-fusing ATPase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.36882.36882.3 12.66 12.66 99 1 1 1 0 701.3533 2022.0745 S739s TMT10 729 (K) FLALLREEGAsPLDFD (-) FLALLREEGAS(1.0)PLDFD s:Phosphorylated S NSF 83106.4 3 5 2984.1 64.07 HUMAN 1 -7.443 24.9048 LLRGIYAYGFEKPSA-p Q14240-2;Y52-p LLRGIYAYGFEKPSA 0.225563990023236 0.705030954023472 -0.18 0.0376666666666667 12.4207279737518 2.08533310346609 -0.18 0.0376666666666667 0.0572700025729622 0.61868087296762 -2.40719010611442 0.527555595589443 Q14240 EIF4A2 Q14240.2.Y52.p_EIF4A2 Q14240-2_Y52y _1_1_52_52 Q14240-2 P38919|Q14240-2|P60842|E7EQG2|P60842-2|J3KT12|F8WE11|E9PBH4 Isoform 2 of Eukaryotic initiation factor 4A-II GG20160819_MSz_CCLE_T4D7_pY_Injection_01.21847.21847.3 17.61 7.1 1.527 3 1 1 0 789.418 2286.2647 Y52y TMT10 48 (R) GIYAyGFEKPSAIQQR (A) GIY(0.0)AY(0.99)GFEKPS(0.0)AIQQR K:TMT10,y:Phosphorylated Y EIF4A2 46716.7 2 2 74.1 34.02 HUMAN 1 -12.4207 2.0853 LLRGRCRSLSDVRVR-p Q5FWE3;S874-p LLRGRCRSLSDVRVR 0.982673656696447 0.531791824446351 0.00566666666666667 0.0743333333333334 0.151918095388052 3.68649864628451 0.00566666666666668 0.0743333333333334 0.965624309304491 0.427907733391743 0.0451274299985405 0.856571289455193 Q5FWE3 PRRT3 Q5FWE3.S874.p_PRRT3 Q5FWE3_S874s _1_1_874_874 Q5FWE3 Q5FWE3|Q5FWE3-2 Proline-rich transmembrane protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5281.5281.3 8.7 4.6 2.061 2 1 1 0 434.5459 1221.6571 S874s TMT10 872 (R) CRsLSDVR (V) CRS(0.99)LS(0.0)DVR C:Carbamidomethylation,s:Phosphorylated S PRRT3 102765.9 1 6 931.1 199.28 HUMAN 1 0.1519 3.6865 LLRNLTMSPLHKRRQ-p O14686-3;S1606-p LLRNLTMSPLHKRRQ 0.399126006215592 0.00525260486566216 -0.134666666666667 -0.520333333333333 7.35885496572427 33.1542486509497 -0.134666666666667 -0.520333333333333 0.18370226176559 0.000483698939162836 -1.52369411549682 -7.43880274957903 O14686 KMT2D O14686.3.S1606.p_KMT2D O14686-3_S1606s _1_1_1606_1606 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16025.16025.2 13.39 9.52 2.284 2 1 1 0 789.9267 1498.8816 S1606s TMT10 1602 (R) NLTMsPLHK (R) NLT(0.0)MS(0.99)PLHK K:TMT10,s:Phosphorylated S KMT2D 600227.3 9 12 17.1 1042.08 HUMAN 1 -7.3589 -33.1542 LLRPQLPS_______-p Q709C8;S3753-p LLRPQLPS_______ 0.0893916699807837 0.037815431524553 -0.340333333333333 -0.359333333333333 22.3248813662516 19.1024881246594 -0.340333333333333 -0.359333333333333 0.00585479729318215 0.012295641370899 -4.39661940396463 -3.68567408654821 Q709C8 VPS13C Q709C8.S3753.p_VPS13C Q709C8_S3753s _1_1_3753_3753 Q709C8 Q709C8|Q709C8-3 Vacuolar protein sorting-associated protein 13C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19688.19688.2 9.65 9.65 99 1 1 1 0 616.8517 1152.7302 S3753s TMT10 3746 (R) LLRPQLPs (-) LLRPQLPS(1.0) s:Phosphorylated S VPS13C 424721.6 1 7 1924.1 106.81 HUMAN 1 -22.3249 -19.1025 LLRRRRGSGVFCANC-p Q9UHF7-2;S905-p LLRRRRGSGVFCANC 0.136456957986583 0.642572813773439 -0.256333333333333 -0.0543333333333333 17.737557761029 2.61737941815362 -0.256333333333333 -0.0543333333333333 0.0168362057271964 0.547346138096249 -3.40934548634962 -0.641481806230515 Q9UHF7 TRPS1 Q9UHF7.2.S905.p_TRPS1 Q9UHF7-2_S905s _1_1_905_905 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14055.14055.3 18.51 16.56 14.847 3 1 1 0 627.297 1799.9094 S905s Hydrogen 903 (R) RGsGVFCANCLTTK (T) RGS(0.99)GVFCANCLT(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S TRPS1 145246 36 29 14.1 1150.14 HUMAN 1 -17.7376 -2.6174 LLRSQSESSDEVTEL-p Q86YS7-3;S661-p LLRSQSESSDEVTEL 0.202846697385928 0.757356365974704 -0.241166666666667 -0.0316666666666667 13.4345043413988 1.66773286252693 -0.241166666666667 -0.0316666666666666 0.0453471049300058 0.681124831928201 -2.58966501259548 -0.433846152790206 Q86YS7 C2CD5 Q86YS7.3.S661.p_C2CD5 Q86YS7-3_S661sS662s_2_2_661_662 Q86YS7-3 Q86YS7-3|Q86YS7-2|Q86YS7-5|Q86YS7-4 Isoform 3 of C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15106.15106.3 14.05 14.05 1.177 6 2 2 0 975.136 2763.4615 S661s S662s TMT10 657 (R) SQSEssDEVTELDLSHGKK (D) S(0.0)QS(0.0)ES(0.99)S(0.99)DEVT(0.0)ELDLS(0.0)HGKK K:TMT10,s:Phosphorylated S C2CD5 117622.7 10 22 349.1 351.16 HUMAN 2 -13.4345 -1.6677 LLRVLHVSENPVPLT-p Q8N1G4;S315-p LLRVLHVSENPVPLT 0.246862869444144 0.335250262098737 -0.186666666666667 -0.0993333333333333 11.6233588461761 6.29153450636282 -0.186666666666667 -0.0993333333333333 0.068811989655822 0.234880276433985 -2.26570153316839 -1.33600388723914 Q8N1G4 LRRC47 Q8N1G4.S315.p_LRRC47 Q8N1G4_S315s _1_1_315_315 Q8N1G4 Q8N1G4 Leucine-rich repeat-containing protein 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20998.20998.3 16.31 16.31 9.317 2 1 1 0 623.6793 1789.0533 S315s TMT10 311 (R) VLHVsENPVPLTVR (V) VLHVS(0.99)ENPVPLT(0.0)VR s:Phosphorylated S LRRC47 64042.3 2 2 814.1 220.85 HUMAN 1 -11.6234 -6.2915 LLSAPLGSGGFTLLH-p Q9H8Y5;S533-p LLSAPLGSGGFTLLH 0.793153470676596 0.0744107784200504 -0.0556666666666667 -0.584666666666667 1.94190975189757 14.9774089594126 -0.0556666666666667 -0.584666666666667 0.639453582488309 0.0317876998827175 -0.495898759402908 -2.87234441433209 Q9H8Y5 ANKZF1 Q9H8Y5.S533.p_ANKZF1 Q9H8Y5_S533s _1_1_533_533 Q9H8Y5 Q9H8Y5|B8ZZS4 Ankyrin repeat and zinc finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37313.37313.3 31.51 31.51 2.374 4 1 1 0 887.155 2579.4871 S533s TMT10 523 (R) VLSLLSAPLGsGGFTLLHAAAAAGR (G) VLS(0.0)LLS(0.0)APLGS(0.99)GGFT(0.0)LLHAAAAAGR s:Phosphorylated S ANKZF1 81610 5 2 1990.1 103.88 HUMAN 1 -1.9419 -14.9774 LLSASQLSAEEEEEK-p P17509;S214-p LLSASQLSAEEEEEK 0.410422805346656 0.0890843481671065 0.169333333333333 -0.198 7.13213541994012 13.8977855818763 0.169333333333333 -0.198 0.193547006199803 0.0407588049335873 1.48412357710759 -2.6725818229434 P17509 HOXB6 P17509.S214.p_HOXB6 P17509_S214s _1_1_214_214 P17509 P17509 Homeobox protein Hox-B6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21120.21120.3 13.93 13.93 2.665 3 1 1 0 843.7498 2449.271 S214s TMT10 207 (K) LLSASQLsAEEEEEKQAE (-) LLS(0.0)AS(0.0)QLS(0.99)AEEEEEKQAE K:TMT10,s:Phosphorylated S HOXB6 25774.2 1 1 6108.1 13.93 HUMAN 1 7.1321 -13.8978 LLSATSASPTQVVSQ-p W0Z7M9;S191-p LLSATSASPTQVVSQ 0.70875474014616 0.642528627355807 0.0513333333333333 0.0513333333333334 2.80973262217665 2.61789025769527 0.0513333333333333 0.0513333333333334 0.523632673572531 0.547281760210217 0.681494605530122 0.641588647754734 W0Z7M9 MKL1 W0Z7M9.S191.p_MKL1 W0Z7M9_S191s _1_1_191_191 W0Z7M9 E7ER32|W0Z7M9|Q969V6|A0A087X287 MKL/myocardin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30644.30644.3 24.88 24.88 1.15 7 1 1 0 922.1437 2684.449 S191s TMT10 180 (R) VSEPLLSATSAsPTQVVSQLPMGR (D) VS(0.0)EPLLS(0.0)AT(0.0)S(0.0)AS(0.99)PT(0.0)QVVS(0.0)QLPMGR s:Phosphorylated S mkl1 103399.4 4 3 1467.1 139.9 HUMAN 1 2.8097 2.6179 LLSLFEDTLDPT___-p Q99640;T495-p LLSLFEDTLDPT___ 0.110880621512576 0.0849594956564103 0.292666666666667 -0.287 19.9772987075268 14.1717611331864 0.292666666666667 -0.287 0.0100524085123002 0.0382669533267855 3.87408011940292 -2.72285122818667 Q99640 PKMYT1 Q99640.T495.p_PKMYT1 Q99640_T495t _1_1_495_495 Q99640 Q99640|Q99640-3|Q99640-4 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.38092.38092.2 14.62 14.62 2.007 3 1 1 0 893.938 1706.905 T495t TMT10 487 (R) NLLSLFEDtLDPT (-) NLLS(0.0)LFEDT(0.99)LDPT(0.0) t:Phosphorylated T PKMYT1 55090.9 5 13 926.1 199.78 HUMAN 1 19.9773 -14.1718 LLSQLYHSPARRFGG-p Q15717;S202-p LLSQLYHSPARRFGG 0.331873069330684 0.208804533816764 0.147666666666667 -0.134 8.94616202370453 8.94962454894005 0.147666666666667 -0.134 0.127462900712476 0.127361318113763 1.79904312152432 -1.79899931904033 Q15717 ELAVL1 Q15717.S202.p_ELAVL1 Q15717_S202s _1_1_202_202 Q15717 Q15717-2 ELAV-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21440.21440.3 22.76 22.76 3.64 3 1 1 0 626.6665 1798.0173 S202s TMT10 192 (K) NVALLSQLYHsPAR (R) NVALLS(0.0)QLY(0.0)HS(0.99)PAR s:Phosphorylated S ELAVL1 36262.4 12 3 2463.1 82.23 HUMAN 1 8.9462 -8.9496 LLSRAGFSPDSSKAD-p O95402;S373-p LLSRAGFSPDSSKAD 0.372815759679882 0.333354096484005 0.195666666666667 -0.107333333333333 7.95027195534029 6.32262187573082 0.195666666666667 -0.107333333333333 0.160314499855688 0.233204975733328 1.62653291118644 -1.34150353621444 O95402 MED26 O95402.S373.p_MED26 O95402_S373s _1_1_373_373 O95402 O95402|B8ZZF3 Mediator of RNA polymerase II transcription subunit 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11367.11367.3 16.47 16.47 2.086 8 1 1 0 966.7925 2818.3946 S373s TMT10 370 (R) AGFsPDSSKADSDAASSGGSDSK (K) AGFS(0.99)PDS(0.0)S(0.0)KADS(0.0)DAAS(0.0)S(0.0)GGS(0.0)DS(0.0)K K:TMT10,s:Phosphorylated S MED26 65901.7 5 6 901.1 203.59 HUMAN 1 7.9503 -6.3226 LLSSFSLSMTDLSKS-p Q96L93-2;S575-p LLSSFSLSMTDLSKS 0.674223809370807 0.702827115548425 -0.0713333333333333 0.039 3.20873201245361 2.10511316958677 -0.0713333333333334 0.039 0.47766871581006 0.615869480418979 -0.762498430898721 0.531893324478969 Q96L93 KIF16B Q96L93.2.S575.p_KIF16B Q96L93-2_S575s_1_1_575_575 Q96L93-2 Q96L93-2|Q96L93-4|Q96L93-6|A0A1B0GTU3|Q96L93-5 Isoform 2 of Kinesin-like protein KIF16B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29794.29794.3 16.63 16.63 1.313 7 1 1 0 743.0498 2131.1721 S575s M576m TMT10 566 (K) SGLLSSFSLsmTDLSK (S) S(0.0)GLLS(0.0)S(0.0)FS(0.0)LS(0.99)M(1.0)T(0.0)DLS(0.0)K K:TMT10,s:Phosphorylated S,m:Oxidized methionine KIF16B 160684.4 8 5 774.1 227.33 HUMAN 1 -3.2087 2.1051 LLSSIENSESDSSEA-p Q5UIP0;S1552-p LLSSIENSESDSSEA 0.80621185033956 0.0401895857381919 0.0376666666666667 -0.329666666666667 1.80325343260713 18.7179846797271 0.0376666666666667 -0.329666666666667 0.66019868770981 0.0134338820861941 0.46477639932902 -3.60595572368442 Q5UIP0 RIF1 Q5UIP0.S1552.p_RIF1 Q5UIP0_S1552sS1554s_2_2_1552_1554 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18560.18560.3 16.85 16.85 3.199 8 2 2 0 1072.4834 3055.5068 S1552s S1554s TMT10 1541 (R) ASQGLLSSIENsEsDSSEAKEEGSR (K) AS(0.0)QGLLS(0.0)S(0.0)IENS(0.99)ES(0.99)DS(0.0)S(0.0)EAKEEGS(0.0)R K:TMT10,s:Phosphorylated S RIF1 276628.8 10 40 29.1 922.06 HUMAN 1 1.8033 -18.718 LLTESPPTPLSKTNK-p Q02086-2;T231-p LLTESPPTPLSKTNK 0.309156160942598 0.0874045865466698 0.175 -0.410333333333333 9.53244592154771 14.0129513768492 0.175 -0.410333333333333 0.111366714600535 0.0396921717878164 1.90058180791686 -2.69367900354796 Q02086 SP2 Q02086.2.T231.p_SP2 Q02086-2_T231t_1_1_231_231 Q02086-2 Q02086|Q02086-2 Isoform 2 of Transcription factor Sp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.35852.35852.5 25.64 24.4 0.61 10 1 1 0 897.883 4403.4074 N211n N214n T231t TMT10 196 (K) LTGGGGNVTLTLPVNnLVnASDTGAPTQLLTESPPtPLSK (T) LT(0.0)GGGGN(0.0)VT(0.0)LT(0.0)LPVN(0.33)N(0.33)LVN(0.33)AS(0.0)DT(0.0)GAPT(0.0)QLLT(0.0)ES(0.0)PPT(0.99)PLS(0.0)K K:TMT10,n:Deamidated,t:Phosphorylated T SP2 64779.7 2 8 950.1 196.36 HUMAN 1 9.5324 -14.013 LLTGIPGSPEPEHGS-p P54725;S205-p LLTGIPGSPEPEHGS 0.349328106249248 0.133252478049186 0.127333333333333 0.181 8.48462693194364 11.537982537269 0.127333333333333 0.181 0.141754647642421 0.070178122673122 1.71914460105679 2.2495712715133 P54725 RAD23A P54725.S205.p_RAD23A P54725_S205s _1_1_205_205 P54725 P54725|P54725-2 UV excision repair protein RAD23 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33945.33945.5 26.89 24.1 1.256 7 1 1 0 975.2752 4792.3791 S205s TMT10 194 (R) AVEYLLTGIPGsPEPEHGSVQESQVSEQPATEAAGENPLEFLR (D) AVEY(0.0)LLT(0.0)GIPGS(0.99)PEPEHGS(0.0)VQES(0.0)QVS(0.0)EQPAT(0.0)EAAGENPLEFLR s:Phosphorylated S RAD23A 39665.6 9 1 1987.2 103.93 HUMAN 1 8.4846 11.538 LLTHQGQSPRNSWDR-p Q96N77;S426-p LLTHQGQSPRNSWDR 0.417861668686393 0.0148644611019303 0.151666666666667 0.423 6.99323974380067 25.3016973025152 0.151666666666667 0.423 0.19983705718262 0.00295005606530783 1.45982981345467 5.11411181040501 Q96N77 ZNF641 Q96N77.S426.p_ZNF641 Q96N77_S426s _1_1_426_426 Q96N77 Q96N77|Q96N77-4|Q96N77-3 Zinc finger protein 641 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.3990.3990.3 14.06 14.06 3.397 2 1 1 0 528.2732 1502.8389 S426s TMT10 418 (R) HLLTHQGQsPR (N) HLLT(0.0)HQGQS(0.99)PR s:Phosphorylated S ZNF641 50554.3 3 2 4649.1 28.36 HUMAN 1 6.9932 25.3017 LLTPQGPSPRTQHCD-p Q96II5;S189-p LLTPQGPSPRTQHCD 0.0166133832515298 0.00124099674209186 -0.962 -0.978333333333333 41.6138436237908 47.554861389983 -0.962 -0.978333333333333 6.89629193162474e-05 1.755956936665e-05 -10.9081624550714 -14.1134655940237 Q96II5 ARAF Q96II5.S189.p_ARAF Q96II5_S189s _1_1_189_189 Q96II5 Q96II5|P10398 ARAF protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13968.13981.4 24.24 22.63 3.288 3 1 1 0 687.6033 2667.4164 S189s TMT10 170 (R) QHEAPSNRPLNELLTPQGPsPR (T) QHEAPS(0.0)NRPLNELLT(0.0)PQGPS(0.99)PR s:Phosphorylated S ARAF 68723.3 4 32 441.2 311.96 HUMAN 1 -41.6138 -47.5549 LMADEKNSLADIFEE-p A0A286YES6;S356-p LMADEKNSLADIFEE 0.600746876542819 0.475752102513941 0.086 0.100666666666667 4.08845329999688 4.30261069482086 0.086 0.100666666666667 0.390080885674415 0.371311953495628 0.934000202747714 0.974375393858118 A0A286YES6 NotFound A0A286YES6.S356.p_NotFound A0A286YES6_S356s _1_1_356_356 A0A286YES6 A0A286YES6|O94854 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30305.30305.3 10.88 10.88 10.884 2 1 1 0 889.7782 2587.3478 S356s TMT10 347 (K) TFLMADEKNsLADIFEER (E) T(0.0)FLMADEKNS(0.99)LADIFEER K:TMT10,s:Phosphorylated S MACF1 151593.8 1 3 2797.1 70.2 HUMAN 1 4.0885 4.3026 LMCDTSGSIQLSEEQ-p Q9H0H5;S114-p LMCDTSGSIQLSEEQ 0.398962840085262 0.144299024616471 0.114 0.151666666666667 7.36378621920764 11.0749554361874 0.114 0.151666666666667 0.183493793007054 0.078073645138738 1.52455373387246 2.1682608911329 Q9H0H5 RACGAP1 Q9H0H5.S114.p_RACGAP1 Q9H0H5_S114s _1_1_114_114 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21606.21606.3 10.39 10.39 1.242 4 1 1 0 875.408 2544.2396 S114s TMT10 105 (R) EMLMCDTSGsIQLSEEQK (S) EMLMCDT(0.0)S(0.0)GS(0.99)IQLS(0.0)EEQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RACGAP1 71709.9 4 1 574.1 268.64 HUMAN 1 7.3638 11.075 LMDCDGKSESSPERE-p Q8NEZ4-3;S1248-p LMDCDGKSESSPERE 0.0622808715508477 0.803734070142981 -0.467666666666667 0.106333333333333 26.2217560372511 1.32766560730951 -0.467666666666667 0.106333333333333 0.00238684598445118 0.73660292532726 -5.36001520440597 0.35412740824758 Q8NEZ4 KMT2C Q8NEZ4.3.S1248.p_KMT2C Q8NEZ4-3_S1248sS1250sS1251s_3_3_1248_1251 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17254.17254.4 7.76 7.76 7.761 4 3 3 0 935.9002 3500.6612 S1248s S1250s S1251s TMT10 1238 (R) EGELMDCDGKsEssPEREAVDDETK (G) EGELMDCDGKS(0.99)ES(0.99)S(0.99)PEREAVDDET(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2C 554869.1 1 29 88.1 626.31 HUMAN 1 -26.2218 1.3277 LMEDDDDSDYGSSKK-p Q9H1E3;S144-p LMEDDDDSDYGSSKK 0.329498307911047 0.00219431911587215 -0.215333333333333 0.876 9.01278378004531 41.3163861038626 -0.215333333333333 0.876 0.125522512022538 7.38518518173476e-05 -1.81057586766529 10.7395960051502 Q9H1E3 NUCKS1 Q9H1E3.S144.p_NUCKS1 Q9H1E3_S144s _1_1_144_144 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18840.18840.4 19.58 19.58 4.946 6 1 1 0 831.8626 3244.4567 S144s TMT10 129 (K) DSGSDEDFLMEDDDDsDYGSSKK (K) DS(0.0)GS(0.0)DEDFLMEDDDDS(0.99)DY(0.0)GS(0.0)S(0.0)KK K:TMT10,s:Phosphorylated S NUCKS1 27295.9 2 11 48.1 767.83 HUMAN 1 -9.0128 41.3164 LMEDRDESEVSDEGG-p O14976;S826-p LMEDRDESEVSDEGG 0.659595024833796 0.0148644611019303 0.0816666666666667 0.374666666666667 3.38798448843627 25.3015920612303 0.0816666666666667 0.374666666666667 0.458354554526267 0.00295012755400166 0.79817237841386 5.11408493984224 O14976 GAK O14976.S826.p_GAK O14976_S826sS829s_2_2_826_829 O14976 O14976|O14976-2 Cyclin-G-associated kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8667.8667.2 14.07 14.07 4.892 5 2 2 0 1175.9357 2190.9269 S826s S829s Hydrogen 824 (R) DEsEVsDEGGSPISSEGQEPR (A) DES(0.99)EVS(0.99)DEGGS(0.0)PIS(0.0)S(0.0)EGQEPR s:Phosphorylated S GAK 144671.4 8 11 746.1 233.2 HUMAN 1 3.388 25.3016 LMELRRDSSESQLAS-p Q5BIX2;S66-p LMELRRDSSESQLAS 0.736796537640786 0.0377703164448426 0.05 0.481333333333333 2.51323623538141 19.1110089463006 0.05 0.481333333333333 0.560630055230502 0.0122715410747383 0.619684068442608 3.68745085804353 Q5BIX2 C18orf25 Q5BIX2.S66.p_C18orf25 Q5BIX2_S66sS67s_2_2_66_67 Q5BIX2 Q5BIX2|Q96B23|Q96B23-2|A0A087WVF1 Chromosome 18 open reading frame 25, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7311.7311.3 13.42 13.42 2.204 8 2 2 0 847.7087 2381.1742 S66s S67s Hydrogen 64 (R) RDssESQLASTESDKPTTGR (V) RDS(0.99)S(0.99)ES(0.0)QLAS(0.0)T(0.0)ES(0.0)DKPT(0.0)T(0.0)GR K:TMT10-Lys-Only,s:Phosphorylated S C18orf25 43622.5 1 5 1972.1 104.68 HUMAN 1 2.5132 19.111 LMFPATLTPSTSSQE-p Q6ULP2;T926-p LMFPATLTPSTSSQE 0.527344543785721 0.41531886116386 -0.0866666666666667 -0.0833333333333333 5.14137115140573 5.07612666849516 -0.0866666666666667 -0.0833333333333333 0.306099686539411 0.310732967913932 -1.12990311344821 -1.11776175253899 Q6ULP2 AFTPH Q6ULP2.T926.p_AFTPH Q6ULP2_T926t _1_1_926_926 Q6ULP2 Q6ULP2|Q6ULP2-4|Q6ULP2-2|Q6ULP2-5 Aftiphilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29454.29454.3 19.83 19.83 1.762 6 1 1 0 792.4173 2295.267 T926t TMT10 918 (K) VLMFPATLtPSTSSQEK (A) VLMFPAT(0.0)LT(0.99)PS(0.0)T(0.0)S(0.0)S(0.0)QEK K:TMT10,t:Phosphorylated T AFTPH 102996.9 3 9 973.1 193.16 HUMAN 1 -5.1414 -5.0761 LMGISPISPKEAKVP-p Q9NW68-7;S252-p LMGISPISPKEAKVP 0.218756095380882 0.380910017248404 0.232 -0.138333333333333 12.7165716508792 5.56825623935373 0.232 -0.138333333333333 0.0534986514612033 0.277443385986998 2.46011787847981 -1.20698221139104 Q9NW68 BSDC1 Q9NW68.7.S252.p_BSDC1 Q9NW68-7_S252s _1_1_252_252 Q9NW68-7 Q9NW68-3|Q9NW68-7 Isoform 7 of BSD domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31937.31937.4 17.09 17.09 2.561 4 1 1 0 892.9199 3488.7031 S252s TMT10 228 (R) AEQSISEEPGWEEEEEELMGISPIsPK (E) AEQS(0.0)IS(0.0)EEPGWEEEEEELMGIS(0.0)PIS(0.99)PK K:TMT10,s:Phosphorylated S BSDC1 49387.9 1 2 1426.1 143.74 HUMAN 1 12.7166 -5.5683 LMGPQGLSPEEMARV-p Q86UU0;S813-p LMGPQGLSPEEMARV 0.536313350058534 0.907217183601252 0.120666666666667 0.0133333333333333 5.0079905998048 0.591971755642925 0.120666666666667 0.0133333333333334 0.315646472338045 0.872575117547043 1.10552222808018 0.168129326482686 Q86UU0 BCL9L Q86UU0.S813.p_BCL9L Q86UU0_S813s _1_1_813_813 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20202.20202.3 18.3 15.61 99 1 1 1 0 813.3796 2358.1566 S813s TMT10 800 (K) MRGPGDLMGPQGLsPEEMAR (V) MRGPGDLMGPQGLS(1.0)PEEMAR s:Phosphorylated S BCL9L 157526.3 6 11 139.1 524.37 HUMAN 1 5.008 0.592 LMHNASDSEVDQDDV-p Q9H2P0;S955-p LMHNASDSEVDQDDV 0.453576106441795 0.159208424284036 0.112666666666667 0.399666666666667 6.33493789100903 10.4982140093088 0.112666666666667 0.399666666666667 0.232544574212273 0.0891617531145814 1.34401800033786 2.06753256992324 Q9H2P0 ADNP Q9H2P0.S955.p_ADNP Q9H2P0_S953sS955s_2_2_953_955 Q9H2P0 Q9H2P0 Activity-dependent neuroprotector homeobox protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23872.23872.3 14.36 14.36 99 2 2 2 0 945.752 2675.3023 S953s S955s TMT10 948 (K) LMHNAsDsEVDQDDVVEWK (D) LMHNAS(1.0)DS(1.0)EVDQDDVVEWK K:TMT10,s:Phosphorylated S ADNP 124930 3 18 276.1 391.38 HUMAN 1 6.3349 10.4982 LMIGSTRYGDGPRPP-p Q08211;Y1155-p LMIGSTRYGDGPRPP 0.126889872225756 0.0827104739026718 0.289 0.193 18.5856466467207 14.3387823419152 0.289 0.193 0.0138495395659187 0.036823220269231 3.58177391559827 2.75363394406793 Q08211 DHX9 Q08211.Y1155.p_DHX9 Q08211_Y1155y _1_1_1155_1155 Q08211 Q08211|Q08211-2 ATP-dependent RNA helicase A GG20160819_MSz_CCLE_T4D7_pY_Injection_02.7606.7663.3 7.15 2.65 99 1 1 1 0 508.9375 1444.8313 Y1155y TMT10 1155 (R) yGDGPRPPK (M) Y(1.0)GDGPRPPK K:TMT10,y:Phosphorylated Y DHX9 142268.2 2 1 218.1 16.41 HUMAN 1 18.5856 14.3388 LMKIEIMSPRKPPLF-p Q8IZC4;S412-p LMKIEIMSPRKPPLF 0.146159903844104 0.0188451795730032 -0.415 -0.398666666666667 17.010156613858 23.7306123999956 -0.415 -0.398666666666667 0.019906015532696 0.00423583232235175 -3.2646355033246 -4.72378920011617 Q8IZC4 RTKN2 Q8IZC4.S412.p_RTKN2 Q8IZC4_S412s _1_1_412_412 Q8IZC4 Q8IZC4|Q8IZC4-2|Q5SVY4 Rhotekin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16925.16925.2 9.12 4.2 99 1 1 1 0 577.7971 1074.6179 S412s TMT10 408 (K) IEIMsPR (K) IEIMS(1.0)PR s:Phosphorylated S RTKN2 70215.5 2 1 4808.1 26.36 HUMAN 1 -17.0102 -23.7306 LMKKELNYFAKALES-p P00558;Y196-p LMKKELNYFAKALES 0.94478758147709 0.0554860227632965 0.0123333333333333 0.245666666666667 0.485201588937259 16.7316197870338 0.0123333333333333 0.245666666666667 0.89429302006189 0.0212245270370884 0.139244061668284 3.20756425394384 P00558 PGK1 P00558.Y196.p_PGK1 P00558_Y196y _1_1_196_196 P00558 P00558|P00558-2 Phosphoglycerate kinase 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.21149.21188.2 15.02 5.03 99 1 1 1 0 711.8758 1342.7771 Y196y TMT10 193 (K) ELNyFAK (A) ELNY(1.0)FAK K:TMT10,y:Phosphorylated Y PGK1 45013.3 2 1 239.1 15.02 HUMAN 1 0.4852 16.7316 LMKNRRISGCLHDIQ-p Q15058;S1200-p LMKNRRISGCLHDIQ 0.716375881972104 0.385116467085209 -0.0653333333333333 -0.143666666666667 2.73124595920206 5.50883683899884 -0.0653333333333333 -0.143666666666667 0.533181907541522 0.281265403624236 -0.665275932908536 -1.19627889044903 Q15058 KIF14 Q15058.S1200.p_KIF14 Q15058_S1200s _1_1_1200_1200 Q15058 Q15058 Kinesin-like protein KIF14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15570.15570.4 14.99 14.99 99 1 1 1 0 578.5693 2231.2847 S1200s TMT10 1198 (R) RIsGCLHDIQVHPIK (N) RIS(1.0)GCLHDIQVHPIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIF14 187857.6 4 9 1771.1 116.14 HUMAN 1 -2.7312 -5.5088 LMKRDSDSEGD____-p Q9H2J4;S236-p LMKRDSDSEGD____ 0.904044346512471 0.0978541429161402 0.0193333333333333 -0.343 0.861509973841072 13.3466146756183 0.0193333333333333 -0.343 0.820066370534371 0.0462741587800274 0.238769553106966 -2.57226013908205 Q9H2J4 PDCL3 Q9H2J4.S236.p_PDCL3 Q9H2J4_S236s _1_1_236_236 Q9H2J4 Q9H2J4 Phosducin-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7467.7467.2 8.52 8.52 1.952 3 1 1 0 874.3911 1667.8108 S236s Hydrogen 227 (R) SVLMKRDSDsEGD (-) S(0.0)VLMKRDS(0.0)DS(0.99)EGD K:TMT10-Lys-Only,s:Phosphorylated S PDCL3 27728 6 1 6320.1 12.42 HUMAN 1 0.8615 -13.3466 LMLLSQYSPSRRQEV-p Q9BTX1;S342-p LMLLSQYSPSRRQEV 0.991338960302651 0.0846558044211952 -0.00200000000000001 0.206 0.0793604413011306 14.1945418535014 -0.00200000000000001 0.206 0.98189252963066 0.0380667512909823 -0.0237640676304675 2.72704359328404 Q9BTX1 NDC1 Q9BTX1.S342.p_NDC1 Q9BTX1_S342s _1_1_342_342 Q9BTX1 Q9BTX1|Q9BTX1-2|Q9BTX1-5|Q9BTX1-6|Q9BTX1-3|Q9BTX1-4 Nucleoporin NDC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36588.36588.3 24.01 18.88 1.264 5 1 1 0 769.7258 2227.1994 S342s TMT10 329 (K) YLALQDLMLLSQYsPSR (R) Y(0.0)LALQDLMLLS(0.0)QY(0.0)S(0.99)PS(0.0)R s:Phosphorylated S NDC1 76988 4 1 1059.1 182.55 HUMAN 1 -0.0794 14.1945 LMPEDQISPVSEVLK-p Q5THK1;S582-p LMPEDQISPVSEVLK 0.313087494557452 0.048037171009988 -0.140333333333333 -0.238 9.43761858380436 17.6291076118763 -0.140333333333333 -0.238 0.113825126495858 0.0172619255352631 -1.88414812484727 -3.38488950560917 Q5THK1 PRR14L Q5THK1.S582.p_PRR14L Q5THK1_S582s _1_1_582_582 Q5THK1 Q5THK1|Q5THK1-4|Q5THK1-2|Q5THK1-3 Protein PRR14L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30987.30987.3 21.48 21.48 3.712 4 1 1 0 1021.9055 2983.7357 S582s TMT10 571 (K) SIVSLMPEDQIsPVSEVLKPK (Q) S(0.0)IVS(0.0)LMPEDQIS(0.99)PVS(0.0)EVLKPK K:TMT10,s:Phosphorylated S PRR14L 241289.3 4 3 1413.1 145.23 HUMAN 1 -9.4376 -17.6291 LMPQRLPSPLPAHPS-p O14503;S383-p LMPQRLPSPLPAHPS 0.592036231647899 0.00464156014953093 -0.102333333333333 0.626 4.19488514445932 34.1325892049141 -0.102333333333333 0.626 0.380637423982628 0.000386136698943457 -0.954203538390214 7.78028517109021 O14503 BHLHE40 O14503.S383.p_BHLHE40 O14503_S383s _1_1_383_383 O14503 O14503 Class E basic helix-loop-helix protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36197.36197.5 21.07 21.07 4.318 6 1 1 0 1053.0024 5181.0092 S383s TMT10 371 (K) ISAPLLMPQRLPsPLPAHPSVDSSVLLQALKPIPPLNLETKD (-) IS(0.0)APLLMPQRLPS(0.99)PLPAHPS(0.0)VDS(0.0)S(0.0)VLLQALKPIPPLNLET(0.0)KD K:TMT10,s:Phosphorylated S BHLHE40 45965.7 1 2 3180.1 58.51 HUMAN 1 -4.1949 34.1326 LMPSRPPSPRERLVA-p Q9NYQ8;S4258-p LMPSRPPSPRERLVA 0.946419240032307 0.07050176088714 -0.0116666666666667 -0.209333333333333 0.471720634228629 15.3153800277547 -0.0116666666666667 -0.209333333333333 0.897073312007178 0.0294077635095844 -0.135554678051561 -2.93584754053255 Q9NYQ8 FAT2 Q9NYQ8.S4258.p_FAT2 Q9NYQ8_S4258s _1_1_4258_4258 Q9NYQ8 Q9NYQ8 Protocadherin Fat 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19326.19326.3 13.11 9.22 1.193 4 1 1 0 804.0544 2330.176 S4258s TMT10 4243 (R) YSNQNLEDLMPSRPPsPR (E) Y(0.0)S(0.0)NQNLEDLMPS(0.0)RPPS(0.99)PR s:Phosphorylated S FAT2 482389.4 1 2 5611.1 17.71 HUMAN 1 -0.4717 -15.3154 LMPVSAQTPKGRRLS-p Q99549-2;T385-p LMPVSAQTPKGRRLS 0.178713485508957 0.926912203365522 0.228333333333333 0.00966666666666668 14.7667652069917 0.465462565840523 0.228333333333333 0.00928778458571216 0.0333674854143929 0.898366902666762 2.83482118009468 0.133826420557328 Q99549 MPHOSPH8 Q99549.2.T385.p_MPHOSPH8 Q99549-2_T385t _1_1_385_385 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18435.18435.2 8.51 5.1 2.109 2 1 1 0 805.4437 1529.9126 T385t TMT10 378 (K) LMPVSAQtPK (G) LMPVS(0.0)AQT(0.99)PK K:TMT10,t:Phosphorylated T MPHOSPH8 98148.4 2 14 242.1 413.34 HUMAN 1 14.7668 0.4655 LMQMRLRSGGTEGLL-p Q9UHB9;S267-p LMQMRLRSGGTEGLL 0.014110712010784 0.00238856624082869 -0.934666666666667 -0.758 44.7906886216207 40.2214051529687 -0.934666666666667 -0.758 3.31841836211512e-05 9.50297276720724e-05 -12.5448691326928 -10.231399099955 Q9UHB9 SRP68 Q9UHB9.S267.p_SRP68 Q9UHB9_S267s _1_1_267_267 Q9UHB9 Q9UHB9|Q9UHB9-4 Signal recognition particle subunit SRP68 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34880.34880.4 17.31 17.31 2.192 4 1 1 0 724.4072 2814.6453 S267s TMT10 265 (R) LRsGGTEGLLAEKLEALITQTR (A) LRS(0.99)GGT(0.0)EGLLAEKLEALIT(0.0)QT(0.0)R K:TMT10,s:Phosphorylated S SRP68 71241.8 2 3 2177.1 94.49 HUMAN 1 -44.7907 -40.2214 LMQVRGVSGEKAAAL-p Q96NY9;S486-p LMQVRGVSGEKAAAL 0.863531937888239 0.468039514350753 0.0706666666666667 0.168333333333333 1.24213890810591 4.39518264500764 0.0706666666666667 0.168333333333333 0.751252809537113 0.363481017824271 0.333560127258995 0.991774324715235 Q96NY9 MUS81 Q96NY9.S486.p_MUS81 Q96NY9_S486s_1_1_486_486 Q96NY9 Q96NY9|E9PRI1 Crossover junction endonuclease MUS81 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15150.15150.4 7.55 0.81 6.494 2 1 1 0 814.9415 3175.7886 N466n S486s Hydrogen 466 (K) nKAQSVREVFARQLMQVRGVsGEK (A) N(1.0)KAQS(0.0)VREVFARQLMQVRGVS(0.99)GEK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S MUS81 61742.4 1 3 4112.1 37.33 HUMAN 1 1.2421 4.3952 LMRHLTASEAKKLPI-p P39748;S197-p LMRHLTASEAKKLPI 0.131556640605402 0.814951859880465 0.269333333333333 -0.0303333333333333 18.1872727081979 1.24358484313176 0.269333333333333 -0.0303333333333333 0.0151800334719865 0.751002729928374 3.50026527454105 -0.333876378598117 P39748 FEN1 P39748.S197.p_FEN1 P39748_S197s _1_1_197_197 P39748 P39748|P39748-2 Flap endonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6851.6851.2 11.29 11.29 1.137 2 1 1 0 697.8776 1314.7782 S197s TMT10 193 (R) HLTAsEAK (K) HLT(0.0)AS(0.99)EAK K:TMT10,s:Phosphorylated S FEN1 42934.5 2 2 2496.1 81.21 HUMAN 1 18.1873 -1.2436 LMRRNSVTPLASPEP-p A0A1W2PR17;T463-p LMRRNSVTPLASPEP 0.130972992482068 0.00514471866284595 -0.358333333333333 -0.689 18.2574443019262 33.3012143287818 -0.358333333333333 -0.689 0.0149367313466624 0.000467604376364208 -3.51455567080747 -7.48927023257171 A0A1W2PR17 NotFound A0A1W2PR17.T463.p_NotFound A0A1W2PR17_T463tS467s_2_2_463_467 A0A1W2PR17 A0A1W2PR17|Q16875-4|Q5VX20|Q16875-2|Q5W015 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15109.15109.3 11.7 11.7 1.109 4 2 2 0 653.6602 1799.0315 T463t S467s TMT10 460 (R) NSVtPLAsPEPTK (K) NS(0.0)VT(0.99)PLAS(0.99)PEPT(0.0)K K:TMT10,t:Phosphorylated T,s:Phosphorylated S PFKFB3 65177.2 6 5 2634.1 75.78 HUMAN 1 -18.2574 -33.3012 LMRSSTDSLPGPISR-p Q9HCD5;S381-p LMRSSTDSLPGPISR 0.807313814085276 0.815232986120363 0.036 0.027 1.78866946327102 1.24119438711595 0.036 0.027 0.662419416334065 0.751416212767648 0.461475542101567 0.333297265322101 Q9HCD5 NCOA5 Q9HCD5.S381.p_NCOA5 Q9HCD5_S381s _1_1_381_381 Q9HCD5 Q9HCD5 Nuclear receptor coactivator 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12838.12838.2 10.99 10.99 1.274 5 1 1 0 763.3783 1445.7797 S381s TMT10 377 (R) SSTDsLPGPISR (Q) S(0.0)S(0.0)T(0.0)DS(0.99)LPGPIS(0.0)R s:Phosphorylated S NCOA5 65763.5 1 14 426.1 319.02 HUMAN 1 1.7887 1.2412 LMSKPVLSGGTGRRI-p Q9ULU4-19;S444-p LMSKPVLSGGTGRRI 0.96776831271533 0.127441913878681 0.00799999999999999 -0.173666666666667 0.276625962383785 11.793132374044 0.00799999999999998 -0.173666666666667 0.938290682684221 0.0661739048426612 0.0810827794763033 -2.29457317051644 Q9ULU4 ZMYND8 Q9ULU4.19.S444.p_ZMYND8 Q9ULU4-19_S444s _1_1_444_444 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-9|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-11|Q9ULU4-10|Q9ULU4-13|Q9ULU4-20|Q9ULU4-5|Q9ULU4-18|Q9ULU4-21|Q9ULU4-8|Q9ULU4-23|Q9ULU4-15|A0A087WYS3|Q9ULU4-17|Q9ULU4-6|Q9ULU4-3|A0A087WV57|Q9ULU4-4 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20474.20474.3 11.89 11.89 1.163 3 1 1 0 652.0379 1874.1298 S444s TMT10 436 (K) ILMSKPVLsGGTGR (R) ILMS(0.0)KPVLS(0.99)GGT(0.0)GR K:TMT10,s:Phosphorylated S ZMYND8 139738.7 1 3 57.1 712.18 HUMAN 1 0.2766 -11.7931 LNAETPKSSPLPAKG-p Q7L2J0;S216-p LNAETPKSSPLPAKG 0.133015503975615 0.0230934221680368 0.359666666666667 0.346333333333333 18.0585317781821 22.3420183038432 0.359666666666667 0.346333333333333 0.0156367618618845 0.00583174021872102 3.47412067426363 4.39583952857425 Q7L2J0 MEPCE Q7L2J0.S216.p_MEPCE Q7L2J0_S216sS217s_2_2_216_217 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16211.16211.4 9.25 9.25 2.288 4 2 2 0 601.0745 2241.3421 S216s S217s TMT10 208 (R) TLNAETPKssPLPAK (G) T(0.0)LNAET(0.0)PKS(0.99)S(0.99)PLPAK K:TMT10,s:Phosphorylated S MEPCE 74981.5 14 16 428.1 317.7 HUMAN 1 18.0585 22.342 LNAHIVVSDPEDITD-p Q16513;S110-p LNAHIVVSDPEDITD 0.42639754304777 0.907630799134866 0.107666666666667 -0.0136666666666666 6.81943955532524 0.58909473705642 0.107666666666667 -0.0136666666666666 0.207996508336268 0.873153353431173 1.42936855575474 -0.167357893396583 Q16513 PKN2 Q16513.S110.p_PKN2 Q16513_S110s _1_1_110_110 Q16513 Q16513|Q16513-2|Q16513-3|B1AL79 Serine/threonine-protein kinase N2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22593.22593.3 27.32 27.32 6.064 2 1 1 0 910.7715 2650.3344 S110s TMT10 100 (K) LQELNAHIVVsDPEDITDCPR (T) LQELNAHIVVS(0.99)DPEDIT(0.0)DCPR C:Carbamidomethylation,s:Phosphorylated S PKN2 112888.4 3 2 389.1 332.6 HUMAN 1 6.8194 -0.5891 LNAHLKQSPDVKESG-p Q4KWH8;S533-p LNAHLKQSPDVKESG 0.177184179558631 0.0114094024336253 -0.232333333333333 -0.560666666666667 14.8968882546463 27.1955944919061 -0.232333333333333 -0.560666666666667 0.0323825596759894 0.0019073946089362 -2.85913475742478 -5.61439922820921 Q4KWH8 PLCH1 Q4KWH8.S533.p_PLCH1 Q4KWH8_S533s _1_1_533_533 Q4KWH8 Q4KWH8|Q4KWH8-2|Q4KWH8-4 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9528.9528.5 18.94 18.94 18.937 2 1 1 0 523.2888 2532.4501 S533s TMT10 521 (K) ATHEGLNAHLKQsPDVK (E) AT(0.0)HEGLNAHLKQS(0.99)PDVK K:TMT10,s:Phosphorylated S PLCH1 191330.6 2 2 201.1 451.38 HUMAN 1 -14.8969 -27.1956 LNASGRRTPPNCAAE-p Q9ULD9;T481-p LNASGRRTPPNCAAE 0.138492471767693 0.0119359897334166 0.347333333333333 0.474333333333333 17.5849482515781 26.8711197544054 0.347333333333333 0.474333333333333 0.0174383413602297 0.00205536058791458 3.37874852242627 5.52624477335664 Q9ULD9 ZNF608 Q9ULD9.T481.p_ZNF608 Q9ULD9_T481t _1_1_481_481 Q9ULD9 Q9ULD9|Q9ULD9-2 Zinc finger protein 608 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9677.9677.3 9.76 6.55 99 1 1 1 0 508.9045 1444.7303 T481t Hydrogen 481 (R) tPPNCAAEDIK (A) T(1.0)PPNCAAEDIK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T ZNF608 163232.5 4 2 1226.1 164.42 HUMAN 1 17.5849 26.8711 LNCDKHKSILLKNGR-p Q92979;S71-p LNCDKHKSILLKNGR 0.0643637687974526 0.00723475027433371 -0.519333333333333 -0.471 25.7607479470926 30.6270206626161 -0.519333333333333 -0.471 0.0026541484220321 0.000865561505733509 -5.23906729069009 -6.61441391853984 Q92979 EMG1 Q92979.S71.p_EMG1 Q92979_S71s _1_1_71_71 Q92979 Q92979 Ribosomal RNA small subunit methyltransferase NEP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12262.12262.3 11.77 11.77 99 1 1 1 0 536.008 1526.0397 S71s TMT10 69 (K) HKsILLK (N) HKS(1.0)ILLK K:TMT10,s:Phosphorylated S EMG1 26947.8 1 1 6429.1 11.77 HUMAN 1 -25.7607 -30.627 LNDNVFATPSPIIQQ-p Q8IX90;T265-p LNDNVFATPSPIIQQ 0.198300279868763 0.00320981770772267 -0.352 -0.625333333333333 13.6868888015063 37.3480219159217 -0.352 -0.625333333333333 0.0427869293359766 0.000184161061013102 -2.63560848457355 -9.00017844245336 Q8IX90 SKA3 Q8IX90.T265.p_SKA3 Q8IX90_T265tS267s_2_2_265_267 Q8IX90 Q8IX90|Q8IX90-3 Spindle and kinetochore-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.34264.34264.3 12.11 12.11 99 2 2 2 0 882.454 2485.4066 T265t S267s TMT10 258 (R) LNDNVFAtPsPIIQQLEK (S) LNDNVFAT(1.0)PS(1.0)PIIQQLEK K:TMT10,t:Phosphorylated T,s:Phosphorylated S SKA3 46872 2 12 966.1 193.88 HUMAN 1 -13.6869 -37.348 LNDPIILSSDDDDDN-p Q9GZR1;S335-p LNDPIILSSDDDDDN 0.499640884227713 0.32572113538594 0.129666666666667 0.147333333333333 5.55476159438315 6.44679459669744 0.129666666666667 0.147333333333333 0.2783068145968 0.226631639373987 1.2048198949362 1.36343853873829 Q9GZR1 SENP6 Q9GZR1.S335.p_SENP6 Q9GZR1_S335sS336s_2_2_335_336 Q9GZR1 Q9GZR1|Q9GZR1-2|F8W6D9 Sentrin-specific protease 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19899.19899.3 11.67 11.67 3.448 6 2 2 0 1117.821 3191.525 S335s S336s TMT10 323 (K) TSLSDLNDPIILssDDDDDNDRTNRR (E) T(0.0)S(0.0)LS(0.0)DLNDPIILS(0.99)S(0.99)DDDDDNDRT(0.0)NRR s:Phosphorylated S SENP6 127627.2 1 4 1568.1 131.02 HUMAN 1 5.5548 6.4468 LNDSDANSDVVDIEG-p Q8IXM2-2;S116-p LNDSDANSDVVDIEG 0.643643269234459 0.603977223794813 0.0666666666666667 0.0523333333333333 3.57751252000934 2.97059581941087 0.0666666666666667 0.0523333333333333 0.438781944069081 0.504592066572927 0.835457123836272 0.714333928429921 Q8IXM2 C17orf49 Q8IXM2.2.S116.p_C17orf49 Q8IXM2-2_S116s_1_1_116_116 Q8IXM2-2 H0YIS7|Q8IXM2-3|F8W1H0|Q8IXM2-2 Isoform 2 of Chromatin complexes subunit BAP18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26075.26075.4 18.41 14.59 2.428 5 1 1 0 1010.2708 3957.0907 N115n S116s TMT10 100 (K) QKADVTLSALNDSDAnsDVVDIEGLGETPPAK (K) QKADVT(0.0)LS(0.0)ALN(0.0)DS(0.0)DAN(0.99)S(0.99)DVVDIEGLGET(0.0)PPAK K:TMT10,n:Deamidated,s:Phosphorylated S BAP18 13957.6 8 5 617.1 261.02 HUMAN 1 3.5775 2.9706 LNEKQAASPLEPKEL-p Q14980;S271-p LNEKQAASPLEPKEL 0.313268519533153 0.393928376111552 -0.149333333333333 0.095 9.42634309084843 5.37836170971898 -0.149333333333333 0.095 0.114121032150835 0.289843675960391 -1.88219442771613 1.17271260020739 Q14980 NUMA1 Q14980.S271.p_NUMA1 Q14980_S271s_1_1_271_271 Q14980 Q14980|Q14980-2|A0A087WY61 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21686.21686.4 15.16 11.95 14.25 3 1 1 0 827.176 3242.7455 Q268q S271s Hydrogen 268 (K) qAAsPLEPKELEELRDKNESLTMR (L) Q(1.0)AAS(0.99)PLEPKELEELRDKNES(0.0)LT(0.0)MR K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S NUMA1 239339.3 6 4 31.1 900.97 HUMAN 1 -9.4263 5.3784 LNESGDPSSKSTEIK-p Q01105-2;S152-p LNESGDPSSKSTEIK 0.651183474642633 0.160655970753759 -0.0703333333333333 0.197666666666667 3.49307544234401 10.4460157885721 -0.0703333333333333 0.197666666666667 0.447396369677632 0.0902398617197341 -0.81889928121785 2.05844191279736 Q01105 SET Q01105.2.S152.p_SET Q01105-2_S152s _1_1_152_152 Q01105-2 P0DME0|A0A087X027|Q01105|Q01105-2|Q01105-4|A0A0C4DFV9|Q01105-3 Isoform 2 of Protein SET HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12535.12535.3 12.94 12.94 1.431 3 1 1 0 662.3159 1904.9754 S152s TMT10 142 (K) EFHLNESGDPsSK (S) EFHLNES(0.0)GDPS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S SET 32102.4 2 7 1479.1 138.77 HUMAN 1 -3.4931 10.446 LNEVDEYSGSSEKID-p P38398;S423-p LNEVDEYSGSSEKID 0.248650960362662 0.156315121340839 -0.276333333333333 -0.157666666666667 11.5380667561445 10.5995412832668 -0.276333333333333 -0.157666666666667 0.0701767617842506 0.0871055588977417 -2.2506580886817 -2.08519066635852 P38398 BRCA1 P38398.S423.p_BRCA1 P38398_S423s _1_1_423_423 P38398 P38398|P38398-4|P38398-8|Q5YLB2|P38398-7 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.34896.34896.3 19.65 14.04 2.253 4 1 1 0 902.7804 2626.35 S423s TMT10 409 (K) VADVLDVLNEVDEYsGSSEK (I) VADVLDVLNEVDEY(0.0)S(0.99)GS(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S BRCA1 210227.6 6 4 106.1 588.91 HUMAN 1 -11.5381 -10.5995 LNFDMTASPKILMSK-p Q9ULU4-19;S433-p LNFDMTASPKILMSK 0.817235134117692 0.00285263123867896 0.041 -0.674333333333333 1.68457787910057 38.4985043295791 0.041 -0.674333333333333 0.678488064249683 0.000141302409339308 0.437758318715589 -9.47609651457743 Q9ULU4 ZMYND8 Q9ULU4.19.S433.p_ZMYND8 Q9ULU4-19_S433s _1_1_433_433 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-10|Q9ULU4-13|Q9ULU4-20|Q9ULU4-5|Q9ULU4-9|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-18|Q9ULU4-21|Q9ULU4-8|Q9ULU4-23|Q9ULU4-15|A0A087WYS3|Q9ULU4-17|Q9ULU4-6|Q9ULU4-3|A0A087WV57|Q9ULU4-4 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22840.22840.2 15.03 15.03 2.221 2 1 1 0 831.4236 1581.8711 S433s TMT10 426 (K) LNFDMTAsPK (I) LNFDMT(0.0)AS(0.99)PK K:TMT10,s:Phosphorylated S ZMYND8 139738.7 17 2 57.1 712.18 HUMAN 1 1.6846 -38.4985 LNGADIYSGCCTLKI-p P14866;S258-p LNGADIYSGCCTLKI 0.618894385389166 0.355885064535351 -0.0723333333333333 0.09 3.87175752950504 5.95187134762972 -0.0723333333333334 0.09 0.410038132663378 0.253987805223552 -0.892535209330949 1.27568390909557 P14866 HNRNPL P14866.S258.p_HNRNPL P14866_S258s _1_1_258_258 P14866 P14866|P14866-2|B4DVF8 Heterogeneous nuclear ribonucleoprotein L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19750.19750.3 17.87 13.49 3.05 4 1 1 0 756.6982 2188.1142 S258s TMT10 249 (K) ASLNGADIYsGCCTLK (I) AS(0.0)LNGADIY(0.0)S(0.99)GCCT(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HNRNPL 64759.2 1 4 846.1 213.74 HUMAN 1 -3.8718 5.9519 LNGAEPNYHSLPSAR-p Q6IAA8;Y40-p LNGAEPNYHSLPSAR 0.456450713346905 0.0533763971173213 -0.152 0.315333333333333 6.27694240383279 16.9731270036831 -0.152 0.315333333333334 0.235670791078911 0.0200764674785541 -1.33375231158179 3.25486853204637 Q6IAA8 LAMTOR1 Q6IAA8.Y40.p_LAMTOR1 Q6IAA8_Y40y _1_1_40_40 Q6IAA8 Q6IAA8|F5H3Y3|F5GX19|F5H479 Ragulator complex protein LAMTOR1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.13479.13479.3 12.51 12.51 4.329 3 1 1 0 669.3288 1926.0031 Y40y TMT10 32 (K) ALNGAEPNyHSLPSAR (T) ALNGAEPNY(0.99)HS(0.0)LPS(0.0)AR y:Phosphorylated Y LAMTOR1 17858.6 1 1 283.1 12.51 HUMAN 1 -6.2769 16.9731 LNGFIPGSAAKEFFT-p Q96D71;S307-p LNGFIPGSAAKEFFT 0.809924688163494 0.085512394335663 -0.035 0.193666666666667 1.76080485712396 14.1351976287262 -0.035 0.193666666666667 0.66668320456489 0.0385904850326399 -0.455153902048096 2.71612646663919 Q96D71 REPS1 Q96D71.S307.p_REPS1 Q96D71_S307s _1_1_307_307 Q96D71 Q96D71|Q96D71-3|Q96D71-4|E9PMG1|Q96D71-2 RalBP1-associated Eps domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26684.26684.3 20.97 21.31 17.418 2 1 1 0 723.0579 2087.1901 S307s TMT10 295 (K) TIQPDLNGFIPGsAAK (E) T(0.0)IQPDLNGFIPGS(0.99)AAK K:TMT10,s:Phosphorylated S REPS1 86831.7 3 23 226.1 425.21 HUMAN 1 -1.7608 14.1352 LNHVRAASPQDLAGG-p P51948;S279-p LNHVRAASPQDLAGG 0.30137742196241 0.811769649464089 0.165 -0.0246666666666667 9.77646362660105 1.26989226347779 0.165 -0.0246666666666667 0.105281881425591 0.746467275981461 1.94289942173429 -0.340237209550505 P51948 MNAT1 P51948.S279.p_MNAT1 P51948_S279s _1_1_279_279 P51948 P51948|P51948-2 CDK-activating kinase assembly factor MAT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15117.15117.3 12.43 12.43 12.431 5 1 1 0 757.6862 2191.0763 S279s TMT10 277 (R) AAsPQDLAGGYTSSLACHR (A) AAS(0.99)PQDLAGGY(0.0)T(0.0)S(0.0)S(0.0)LACHR C:Carbamidomethylation,s:Phosphorylated S MNAT1 36278.7 1 2 4693.1 27.85 HUMAN 1 9.7765 -1.2699 LNICVGESGDRLTRA-p P62913;S29-p LNICVGESGDRLTRA 0.871909504018111 0.972671689576115 0.0246666666666667 -0.00399999999999997 1.16607914418115 0.16996105255777 0.0246666666666667 -0.00399999999999997 0.764525693861474 0.961620902142003 0.315034037711462 -0.0503833781776036 P62913 RPL11 P62913.S29.p_RPL11 P62913_S29s _1_1_29_29 P62913 P62913|P62913-2 60S ribosomal protein L11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18872.18872.4 14.27 14.27 2.387 2 1 1 0 633.0824 2449.342 S29s TMT10 19 (R) KLCLNICVGEsGDRLTR (A) KLCLNICVGES(0.99)GDRLT(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RPL11 20480.2 2 1 3548.1 48.49 HUMAN 1 1.1661 -0.17 LNIQEPCSPATSSEA-p Q03112-3;S48-p LNIQEPCSPATSSEA 0.906395416103857 0.23716175872294 -0.036 0.14 0.838836659318413 8.23148016651615 -0.036 0.14 0.824358905711034 0.150262975113066 -0.232948947131585 1.67474704444861 Q03112 MECOM Q03112.3.S48.p_MECOM Q03112-3_S48s_1_1_48_48 Q03112-3 Q03112-3|E7EQ57 Isoform 2 of MDS1 and EVI1 complex locus protein EVI1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.33479.33479.4 21.55 21.55 2.273 11 1 1 0 1488.4323 5869.7811 N42n S48s TMT10 10 (K) LATNNECVYGNYPEIPLEEMPDADGVASTPSLnIQEPCsPATSSEAFTPK (E) LAT(0.0)N(0.0)N(0.0)ECVY(0.0)GN(0.0)Y(0.0)PEIPLEEMPDADGVAS(0.0)T(0.0)PS(0.0)LN(0.99)IQEPCS(0.99)PAT(0.0)S(0.0)S(0.0)EAFT(0.0)PK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S MECOM 141074 1 1 937.1 198.37 HUMAN 1 -0.8388 8.2315 LNKALSSSADDASLV-p Q9NQW6;S276-p LNKALSSSADDASLV 0.919774718344234 0.00320981770772267 -0.0163333333333333 -0.668333333333333 0.710302250556208 37.3799186776333 -0.0163333333333333 -0.668333333333333 0.849121377730132 0.000182813444794494 -0.199544076793601 -9.01307905656416 Q9NQW6 ANLN Q9NQW6.S276.p_ANLN Q9NQW6_S276s _1_1_276_276 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23220.23220.2 16.36 16.36 1.127 8 1 1 0 1274.1536 2467.3292 S276s TMT10 272 (K) ALSSsADDASLVNASISSSVK (A) ALS(0.0)S(0.0)S(0.99)ADDAS(0.0)LVNAS(0.0)IS(0.0)S(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S ANLN 125566 4 18 68.1 675.08 HUMAN 1 -0.7103 -37.3799 LNKFSPSSPESANEC-p Q8NEV8;S1074-p LNKFSPSSPESANEC 0.426515655420314 0.00246432253845191 -0.113 -0.709333333333333 6.81630981285798 39.9640730698715 -0.113 -0.709333333333334 0.208146455008715 0.000100830679289769 -1.42881933710271 -10.1152136177279 Q8NEV8 EXPH5 Q8NEV8.S1074.p_EXPH5 Q8NEV8_S1074s _1_1_1074_1074 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12131.12131.2 14.05 14.05 1.106 5 1 1 0 1032.9719 1984.9686 S1074s TMT10 1070 (K) FSPSsPESANECSK (V) FS(0.0)PS(0.0)S(0.99)PES(0.0)ANECS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EXPH5 223884.5 4 16 129.1 537.25 HUMAN 1 -6.8163 -39.9641 LNKGLSKSMGFLSIK-p Q12923-4;S240-p LNKGLSKSMGFLSIK 0.216321397365098 0.0692536445132431 -0.422666666666667 0.275666666666667 12.8125932241231 15.4181576104209 -0.422666666666667 0.275666666666667 0.0523287881847663 0.0287199869979803 -2.47735143162351 2.95525637768685 Q12923 PTPN13 Q12923.4.S240.p_PTPN13 Q12923-4_S240s _1_1_240_240 Q12923-4 Q12923-4|Q12923-3|Q12923-2 Isoform 4 of Tyrosine-protein phosphatase non-receptor type 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27651.27651.4 17.23 13.18 5.005 4 1 1 0 698.356 2710.4365 S240s TMT10 240 (K) sMGFLSIKDTQDENYFK (D) S(0.99)MGFLS(0.0)IKDT(0.0)QDENY(0.0)FK K:TMT10,s:Phosphorylated S PTPN13 279614.3 6 2 518.1 284.65 HUMAN 1 -12.8126 15.4182 LNKNAWGSIERNRSS-p Q68DQ2;S340-p LNKNAWGSIERNRSS 0.569246194913171 0.0535045410167382 -0.110333333333333 -0.300666666666667 4.50245417922148 16.9574525676585 -0.110333333333333 -0.300666666666667 0.354612942372238 0.0201490578250555 -1.01203584405115 -3.25178933048974 Q68DQ2 CRYBG3 Q68DQ2.S340.p_CRYBG3 Q68DQ2_S340s _1_1_340_340 Q68DQ2 Q68DQ2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12431.12431.2 9.72 4.69 99 1 1 1 0 621.2976 1161.6214 S340s TMT10 336 (K) NAWGsIER (N) NAWGS(1.0)IER s:Phosphorylated S CRYBG3 333308.2 1 3 582.1 265.87 HUMAN 1 -4.5025 -16.9575 LNKNSKNSNGQELEK-p Q7Z6Z7;S1695-p LNKNSKNSNGQELEK 0.333898583050392 0.0360641382188965 -0.166666666666667 -0.266333333333333 8.89206376382031 19.4204726609737 -0.166666666666667 -0.266333333333333 0.129060583303724 0.0114275395729609 -1.78967865417794 -3.75228456033038 Q7Z6Z7 HUWE1 Q7Z6Z7.S1695.p_HUWE1 Q7Z6Z7_S1695s _1_1_1695_1695 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7258.7258.3 11.71 11.71 2.153 2 1 1 0 705.707 2035.1387 S1695s TMT10 1691 (K) NSKNsNGQELEK (T) NS(0.0)KNS(0.99)NGQELEK K:TMT10,s:Phosphorylated S HUWE1 485818.9 3 12 11.1 1210.45 HUMAN 1 -8.8921 -19.4205 LNKQQRGSNEEQVNG-p Q9UHF7-2;S983-p LNKQQRGSNEEQVNG 0.816162932725909 0.621867543902399 0.0643333333333333 -0.067 1.6941761504473 2.80441239622415 0.0643333333333333 -0.067 0.676990204677871 0.524274530957376 0.439957063082117 -0.680306377160028 Q9UHF7 TRPS1 Q9UHF7.2.S983.p_TRPS1 Q9UHF7-2_S983s _1_1_983_983 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6610.6610.3 15.47 15.47 7.332 2 1 1 0 746.3558 2157.0846 S983s TMT10 979 (K) QQRGsNEEQVNGSPLER (R) QQRGS(0.99)NEEQVNGS(0.0)PLER s:Phosphorylated S TRPS1 145246 1 30 14.1 1150.14 HUMAN 1 1.6942 -2.8044 LNLKKLLSPSNEKLT-p Q14694;S547-p LNLKKLLSPSNEKLT 0.493688343682119 0.0504482638746165 -0.0976666666666667 -0.235333333333333 5.6440066895556 17.3324657738859 -0.0976666666666667 -0.235333333333333 0.272646125888361 0.0184821896621182 -1.22087647947095 -3.32580991883075 Q14694 USP10 Q14694.S547.p_USP10 Q14694_S547s _1_1_547_547 Q14694 Q14694-2|Q14694-3 Ubiquitin carboxyl-terminal hydrolase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13037.13037.3 12.24 8.76 1.239 2 1 1 0 595.0163 1703.067 S547s TMT10 544 (K) KLLsPSNEK (L) KLLS(0.99)PS(0.0)NEK K:TMT10,s:Phosphorylated S USP10 87759.8 7 11 358.1 346.34 HUMAN 1 -5.644 -17.3325 LNLLQNKSM______-p O43353;S539-p LNLLQNKSM______ 0.324520848949951 0.0138811738705875 0.313666666666667 -0.673 9.15449591418655 25.7842801577988 0.313666666666667 -0.673 0.12149276289958 0.00263980583337433 1.83511025694031 -5.23838575022796 O43353 RIPK2 O43353.S539.p_RIPK2 O43353_S539s _1_1_539_539 O43353 O43353|O43353-2 Receptor-interacting serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23858.23858.3 10.7 10.7 6.326 3 1 1 0 624.002 1790.0246 S539s TMT10 529 (R) SPSLNLLQNKsM (-) S(0.0)PS(0.0)LNLLQNKS(0.99)M K:TMT10,s:Phosphorylated S RIPK2 61764.4 1 8 1914.1 107.79 HUMAN 1 9.1545 -25.7843 LNLMADNSQPENEKE-p Q01167;S239-p LNLMADNSQPENEKE 0.418102598248955 0.00888933969691268 0.133 0.529666666666667 6.98922517532915 29.0570430265879 0.133 0.529666666666667 0.200021869676608 0.00124249799714466 1.4591270043928 6.14094548670438 Q01167 FOXK2 Q01167.S239.p_FOXK2 Q01167_S239s_1_1_239_239 Q01167 Q01167|Q01167-2|Q01167-3 Forkhead box protein K2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21196.21196.3 19.09 19.09 10.509 2 1 1 0 896.0886 2590.2893 M235m S239s TMT10 227 (R) VMPSDLNLmADNsQPENEK (E) VM(0.0)PS(0.0)DLNLM(0.99)ADNS(0.99)QPENEK K:TMT10,m:Oxidized methionine,s:Phosphorylated S FOXK2 69288.9 8 6 689.1 243.19 HUMAN 1 6.9892 29.057 LNLNASDSESEELHR-p Q96ST2;S82-p LNLNASDSESEELHR 0.238535570822241 0.0665607083904215 0.184333333333333 0.441666666666667 11.9065760899203 15.6514100221262 0.184333333333333 0.441666666666667 0.0644677318779318 0.0272181747323768 2.31577469247806 2.99947746382664 Q96ST2 IWS1 Q96ST2.S82.p_IWS1 Q96ST2_S69sS80sS82s_3_3_69_82 Q96ST2 Q96ST2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12737.12737.4 13.17 13.17 1.149 5 3 3 0 875.8538 3260.4889 S69s S80s S82s TMT10 63 (K) GHHVTDsENDEPLNLNAsDsESEELHR (Q) GHHVT(0.0)DS(0.99)ENDEPLNLNAS(0.99)DS(0.99)ES(0.0)EELHR s:Phosphorylated S IWS1 92010 2 20 230.1 422.87 HUMAN 1 11.9066 15.6514 LNLNLDRSKAEMDLK-p Q9ULU4-19;S550-p LNLNLDRSKAEMDLK 0.247048592039774 0.710363521107458 -0.578666666666667 0.0766666666666667 11.6042468039084 2.04173752599131 -0.578666666666667 0.0766666666666667 0.0691154785853974 0.62492262362153 -2.26232921652286 0.517964799759125 Q9ULU4 ZMYND8 Q9ULU4.19.S550.p_ZMYND8 Q9ULU4-19_S550s _1_1_550_550 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-10|Q9ULU4-13|Q9ULU4-20|Q9ULU4-5 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23350.23350.4 15.17 9.53 3.775 6 1 1 0 794.4333 3094.7385 S550s TMT10 536 (K) TSTTGSILNLNLDRsKAEMDLK (E) T(0.0)S(0.0)T(0.0)T(0.0)GS(0.0)ILNLNLDRS(0.99)KAEMDLK K:TMT10,s:Phosphorylated S ZMYND8 139738.7 3 10 57.1 712.18 HUMAN 1 -11.6042 2.0417 LNLNRSRSLSNSNPD-p Q96N67-6;S896-p LNLNRSRSLSNSNPD 0.80012376994327 0.30961316318236 -0.0406666666666667 0.141666666666667 1.8678846609673 6.72985427271247 -0.0406666666666667 0.141666666666667 0.650446429271521 0.212331570855304 -0.47934121480469 1.4132622761355 Q96N67 DOCK7 Q96N67.6.S896.p_DOCK7 Q96N67-6_S896sS900s_2_2_896_900 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3|Q96N67-4 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12389.12389.2 17.77 17.77 1.187 7 2 2 0 1174.4713 2188 S896s S900s Hydrogen 896 (R) sLSNsNPDISGTPTSPDDEVR (S) S(0.99)LS(0.0)NS(0.99)NPDIS(0.0)GT(0.0)PT(0.0)S(0.0)PDDEVR s:Phosphorylated S DOCK7 243551.1 7 25 345.1 352.4 HUMAN 1 -1.8679 6.7299 LNLPEVDSDVAKPNQ-p Q7Z7G8;S1882-p LNLPEVDSDVAKPNQ 0.757811548618003 0.961567729189237 -0.0606666666666667 -0.00566666666666663 2.30691682680953 0.244575380903827 -0.0606666666666667 -0.00566666666666664 0.587906575083943 0.945240806158349 -0.575747038832423 -0.0719242271277785 Q7Z7G8 VPS13B Q7Z7G8.S1882.p_VPS13B Q7Z7G8_S1882s _1_1_1882_1882 Q7Z7G8 Q7Z7G8|Q7Z7G8-6 Vacuolar protein sorting-associated protein 13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29094.29094.4 9.72 8.83 3.074 6 1 1 0 945.9761 3700.9468 S1882s TMT10 1873 (K) SSLNLPEVDsDVAKPNQACISTVTAEDLLR (S) S(0.0)S(0.0)LNLPEVDS(0.99)DVAKPNQACIS(0.0)T(0.0)VT(0.0)AEDLLR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S VPS13B 454589.9 1 13 766.1 229.13 HUMAN 1 -2.3069 -0.2446 LNLPRNPSVIDKQDK-p Q9NPL8;S277-p LNLPRNPSVIDKQDK 0.754195374913311 0.0298310132766052 0.066 0.329333333333333 2.3415553155455 20.6425085947268 0.066 0.329333333333333 0.583236195616304 0.00862480213478856 0.583180323661234 4.0143052792182 Q9NPL8 TIMMDC1 Q9NPL8.S277.p_TIMMDC1 Q9NPL8_S277s _1_1_277_277 Q9NPL8 Q9NPL8|C9JU35 Complex I assembly factor TIMMDC1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23576.23576.5 9.7 9.7 99 1 1 1 0 681.3974 3322.9868 S277s TMT10 265 (K) KIEALLNLPRNPsVIDKQDKD (-) KIEALLNLPRNPS(1.0)VIDKQDKD K:TMT10,s:Phosphorylated S TIMMDC1 32348.3 3 1 5728.1 16.77 HUMAN 1 2.3416 20.6425 LNLSCIHSPVVNELM-p Q9Y2X3;S109-p LNLSCIHSPVVNELM 0.413519054255843 0.509276113975482 -0.116 0.0753333333333334 7.0722797834433 3.92862727294969 -0.116 0.0753333333333334 0.196232990186695 0.404703791100829 -1.47365957023771 0.903310841112939 Q9Y2X3 NOP58 Q9Y2X3.S109.p_NOP58 Q9Y2X3_S109s _1_1_109_109 Q9Y2X3 Q9Y2X3 Nucleolar protein 58 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25149.25149.3 18.31 18.31 5.938 2 1 1 0 731.0376 2111.1303 S109s TMT10 102 (K) LNLSCIHsPVVNELMR (G) LNLS(0.0)CIHS(0.99)PVVNELMR C:Carbamidomethylation,s:Phosphorylated S NOP58 60090.6 2 3 481.1 298.21 HUMAN 1 -7.0723 3.9286 LNLSPPMSPVQLPLR-p Q8N0Z3;S764-p LNLSPPMSPVQLPLR 0.586785130847487 0.945758152567333 0.0826666666666667 -0.0093333333333333 4.25981877492769 0.349197637933962 0.0826666666666667 -0.0093333333333333 0.374988649675999 0.922741888611449 0.966479678317818 -0.101578648725751 Q8N0Z3 SPICE1 Q8N0Z3.S764.p_SPICE1 Q8N0Z3_S764s _1_1_764_764 Q8N0Z3 Q8N0Z3 Spindle and centriole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.35663.35663.3 15.59 15.59 2.044 2 1 1 0 747.4192 2160.2776 S764s TMT10 754 (K) LVGLNLSPPMsPVQLPLR (A) LVGLNLS(0.0)PPMS(0.99)PVQLPLR s:Phosphorylated S SPICE1 96605.1 1 11 556.1 273.19 HUMAN 1 4.2598 -0.3492 LNNAFRLSPAPSKTL-p P19838-2;S852-p LNNAFRLSPAPSKTL 0.692246614290166 0.015722835694964 -0.0606666666666667 -0.376 2.99505855833551 24.9312332926284 -0.0606666666666667 -0.376 0.501757813512001 0.00321274806534908 -0.719408457506499 -5.0201380309472 P19838 NFKB1 P19838.2.S852.p_NFKB1 P19838-2_S852s _1_1_852_852 P19838-2 P19838-2|P19838-3 Isoform 2 of Nuclear factor NF-kappa-B p105 subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31726.31726.3 11.13 11.13 11.131 2 1 1 0 802.7948 2326.4011 S852s TMT10 840 (K) LGLGILNNAFRLsPAPSK (T) LGLGILNNAFRLS(0.99)PAPS(0.0)K K:TMT10,s:Phosphorylated S NFKB1 106052.8 2 1 3415.1 51.67 HUMAN 1 -2.9951 -24.9312 LNNDLVGSTENLLKE-p Q8N5G2;S305-p LNNDLVGSTENLLKE 0.364490557264736 0.347598153329087 0.125666666666667 -0.0963333333333333 8.1336559099517 6.08367090473642 0.125666666666667 -0.0963333333333333 0.153686035983837 0.246395578078752 1.65833868662696 -1.29914206850226 Q8N5G2 TMEM57 Q8N5G2.S305.p_TMEM57 Q8N5G2_S305s _1_1_305_305 Q8N5G2 Q8N5G2 Macoilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20953.20953.3 15.31 15.31 1.177 6 1 1 0 1140.2582 3338.7829 S305s TMT10 297 (K) RLNNDLVGsTENLLKEDSCTASSK (N) RLNNDLVGS(0.99)T(0.0)ENLLKEDS(0.0)CT(0.0)AS(0.0)S(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TMEM57 76746.7 12 2 2204.1 93.5 HUMAN 1 8.1337 -6.0837 LNNKLLNSPAKTLPG-p Q9UBZ9;S1097-p LNNKLLNSPAKTLPG 0.228121437400058 0.00248584650157384 -0.199666666666667 -0.935666666666667 12.331136118095 39.860258089965 -0.199666666666667 -0.935666666666667 0.058463712256448 0.00010327000332489 -2.39121038482131 -10.0686833566151 Q9UBZ9 REV1 Q9UBZ9.S1097.p_REV1 Q9UBZ9_S1097s _1_1_1097_1097 Q9UBZ9 Q9UBZ9|Q9UBZ9-2 DNA repair protein REV1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15331.15331.2 9.81 3.41 99 1 1 1 0 640.8717 1200.7716 S1097s TMT10 1094 (K) LLNsPAK (T) LLNS(1.0)PAK K:TMT10,s:Phosphorylated S REV1 139443.7 3 6 1665.1 122.52 HUMAN 1 -12.3311 -39.8603 LNNSNLFSPVNRDSE-p P52948;S612-p LNNSNLFSPVNRDSE 0.784610264714199 0.675474614290912 0.0443333333333333 0.043 2.0285154764488 2.32896326232582 0.0443333333333333 0.043 0.626828093054888 0.584929700535407 0.515107776595931 0.580409183770537 P52948 NUP98 P52948.S612.p_NUP98 P52948_S612s _1_1_612_612 P52948 P52948|P52948-5|P52948-2|P52948-6|P52948-3|P52948-4 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19094.19094.3 16.99 16.99 3.6 2 1 1 0 599.9673 1717.9183 S612s TMT10 604 (K) NLNNSNLFsPVNR (D) NLNNS(0.0)NLFS(0.99)PVNR s:Phosphorylated S NUP98 198716.8 6 5 187.1 472.84 HUMAN 1 2.0285 2.329 LNNSTGQSPHHKVQR-p J3KNR0;S423-p LNNSTGQSPHHKVQR 0.832895587307356 0.00455061128120994 -0.0316666666666667 -0.570666666666667 1.53388458512867 34.3360150304849 -0.0316666666666667 -0.570666666666667 0.702443731838611 0.000368466913919608 -0.402910874990962 -7.85294861275413 J3KNR0 NotFound J3KNR0.S423.p_NotFound J3KNR0_S423s _1_1_423_423 J3KNR0 J3KNR0|P27448|A0A0A0MT23|P27448-2|A0A0A0MSZ1|P27448-4|P27448-3|P27448-8|A0A0A0MST9 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4316.4316.4 14.86 14.86 3.597 5 1 1 0 625.5675 2419.2842 S423s TMT10 410 (K) VRPSSDLNNSTGQsPHHK (V) VRPS(0.0)S(0.0)DLNNS(0.0)T(0.0)GQS(0.99)PHHK K:TMT10,s:Phosphorylated S MARK3 87513.5 4 32 200.3 451.67 HUMAN 1 -1.5339 -34.336 LNPEGGKTGKTPRRR-p A8MYZ6;T174-p LNPEGGKTGKTPRRR 0.132031969629553 0.400593401263287 -0.333333333333333 -0.119666666666667 18.1575368760891 5.28271165385794 -0.333333333333333 -0.119666666666667 0.0152843267106115 0.296298078182713 -3.49421813095831 -1.15537844092518 A8MYZ6 NotFound A8MYZ6.T174.p_NotFound A8MYZ6_T174tT177tS184s_3_3_174_184 A8MYZ6 A8MYZ6 Forkhead box protein O6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8189.8189.3 8.69 0.37 99 3 3 3 0 930.4584 2532.476 T174t T177t S184s M185m N187n TMT10 174 (K) tGKtPRRRAVsmDnGAK (F) T(1.0)GKT(1.0)PRRRAVS(1.0)M(1.0)DN(1.0)GAK K:TMT10,t:Phosphorylated T,s:Phosphorylated S,m:Oxidized methionine,n:Deamidated FOXO6 50822.2 1 6 2524.1 80 HUMAN 1 -18.1575 -5.2827 LNPISSVS_______-p Q99717;S465-p LNPISSVS_______ 0.278015984722801 1 -0.232666666666667 1.85037170770859e-17 10.5226579687162 9.64327466553287e-16 -0.232666666666667 2.40370335797946e-17 0.0886613221007854 1 -2.07267864708521 3.1728125122199e-16 Q99717 SMAD5 Q99717.S465.p_SMAD5 Q99717_S465s _1_1_465_465 Q99717 Q99717 Mothers against decapentaplegic homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30834.30834.3 14.63 14.63 2.583 5 1 1 0 646.9986 1859.0146 S465s TMT10 450 (K) VLTQMGSPLNPISSVs (-) VLT(0.0)QMGS(0.0)PLNPIS(0.0)S(0.0)VS(0.99) s:Phosphorylated S SMAD5 52942 3 10 2883.1 67.13 HUMAN 1 -10.5227 0 LNPKLTGSPGVKATK-p F5H619;S1710-p LNPKLTGSPGVKATK 0.838274783466982 0.0374514647142981 -0.033 -0.294333333333333 1.48272497704893 19.1673409800792 -0.033 -0.294333333333333 0.710767403306886 0.0121133956369189 -0.39093557754439 -3.69920849310158 F5H619 HEATR5A F5H619.S1710.p_HEATR5A F5H619_S1710s _1_1_1710_1710 F5H619 F5H619|Q86XA9|Q86XA9-2 HEAT repeat-containing protein 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12644.12644.2 11.28 4.55 2.121 2 1 1 0 648.8688 1216.7665 S1710s TMT10 1707 (K) LTGsPGVK (A) LT(0.0)GS(0.99)PGVK K:TMT10,s:Phosphorylated S HEATR5A 226066 1 2 2924.1 65.83 HUMAN 1 -1.4827 -19.1673 LNPKRKQSPAYMKED-p B4DWF2;S439-p LNPKRKQSPAYMKED 0.64009150118223 0.224976693389384 -0.0993333333333333 0.165 3.62064315622444 8.53318349558204 -0.0993333333333334 0.165 0.434445881363833 0.14017857811086 -0.843883101950292 1.72696604457182 B4DWF2 IKZF2 B4DWF2.S439.p_IKZF2 B4DWF2_S439s _1_1_439_439 B4DWF2 B4DWF2|Q9UKS7|Q9UKS7-2|Q9UKS7-7|Q9UKS7-4|A0A0A0MT14|A0A0A0MSL2|Q9UKS7-8 Zinc finger protein Helios HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6555.6555.4 9.89 9.89 4.381 2 1 1 0 469.7684 1796.082 S439s TMT10 436 (K) RKQsPAYMK (E) RKQS(0.99)PAY(0.0)MK K:TMT10,s:Phosphorylated S IKZF2 61457.9 3 3 2223.2 92.84 HUMAN 1 -3.6206 8.5332 LNPQWNESFTFKLKP-p P17252;S226-p LNPQWNESFTFKLKP 0.869521280017076 0.0636427027320349 -0.0253333333333333 0.284 1.18667746777651 15.9281995560018 -0.0253333333333334 0.284 0.760908180518108 0.0255375978918091 -0.320070551212755 3.05227121495871 P17252 PRKCA P17252.S226.p_PRKCA P17252_S226s _1_1_226_226 P17252 P17252|J3KRN5 Protein kinase C alpha type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26384.26384.3 17.12 17.12 2.482 4 1 1 0 746.3731 2157.1381 S226s TMT10 217 (R) STLNPQWNEsFTFK (L) S(0.0)T(0.0)LNPQWNES(0.99)FT(0.0)FK K:TMT10,s:Phosphorylated S PRKCA 77889.6 1 7 2439.1 83.37 HUMAN 1 -1.1867 15.9282 LNPRLTLSCEEFVKI-p M0QXB5;S218-p LNPRLTLSCEEFVKI 0.534705148071304 0.0134940708843181 0.119333333333333 0.437333333333333 5.03303627727252 25.9960561585923 0.119333333333333 0.437333333333333 0.313831384151448 0.00251416851925141 1.11010875768519 5.29359903568175 M0QXB5 NotFound M0QXB5.S218.p_NotFound M0QXB5_S218s _1_1_218_218 M0QXB5 M0QXB5|O95571 Persulfide dioxygenase ETHE1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24498.24498.3 10.24 5.13 2.275 2 1 1 0 588.6419 1683.9392 S218s TMT10 215 (R) LTLsCEEFVK (I) LT(0.0)LS(0.99)CEEFVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ETHE1 28900.3 1 2 5424.1 19.45 HUMAN 1 5.033 25.9961 LNPYPTPSPPHPLYP-p Q5JTD0;S320-p LNPYPTPSPPHPLYP 0.771638354290043 0.764117408711834 0.0483333333333333 -0.0296666666666667 2.15708748190926 1.61396149750589 0.0483333333333333 -0.0296666666666667 0.608542972899963 0.689610475896826 0.543315844820506 -0.421460353296868 Q5JTD0 TJAP1 Q5JTD0.S320.p_TJAP1 Q5JTD0_S320s _1_1_320_320 Q5JTD0 Q5JTD0|Q5JTD0-2 Tight junction-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20095.20095.3 16.31 16.31 1.371 4 1 1 0 738.0451 2132.149 S320s TMT10 313 (K) LNPYPTPsPPHPLYPGR (R) LNPY(0.0)PT(0.0)PS(0.99)PPHPLY(0.0)PGR s:Phosphorylated S TJAP1 62162.4 5 4 1364.1 149.81 HUMAN 1 2.1571 -1.614 LNQAAYDSLVVGKLS-p Q00587;S132-p LNQAAYDSLVVGKLS 0.175734720482037 0.00838457405165062 -0.231666666666667 -0.457666666666667 15.0145507021293 29.5206479868187 -0.231666666666667 -0.457666666666667 0.0315170042142801 0.00111669661921284 -2.88118061424452 -6.27785304507935 Q00587 CDC42EP1 Q00587.S132.p_CDC42EP1 Q00587_S132s_1_1_132_132 Q00587 Q00587 Cdc42 effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.32533.32533.4 12.12 9.5 1.64 3 1 1 0 660.8616 2559.4547 N126n S132s TMT10 118 (K) NAISLPQLnQAAYDsLVVGK (L) N(0.0)AIS(0.0)LPQLN(0.99)QAAY(0.0)DS(0.99)LVVGK K:TMT10,n:Deamidated,s:Phosphorylated S CDC42EP1 40408.2 1 3 1362.1 149.93 HUMAN 1 -15.0146 -29.5206 LNQEKKVSVYLEDTD-p O60487;S208-p LNQEKKVSVYLEDTD 0.334862714481544 0.0249128990779079 -0.134666666666667 -0.355333333333333 8.86647026420063 21.8175921210807 -0.134666666666667 -0.355333333333333 0.129823398419796 0.00658022566722282 -1.78524845581468 -4.27586813406351 O60487 MPZL2 O60487.S208.p_MPZL2 O60487_S208sT214t_2_2_208_214 O60487 O60487 Myelin protein zero-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19854.19854.3 7.76 7.76 4.265 3 2 2 0 596.2829 1626.8991 S208s T214t TMT10 206 (K) KVsVYLEDtD (-) KVS(0.99)VY(0.0)LEDT(0.99)D K:TMT10,s:Phosphorylated S,t:Phosphorylated T MPZL2 24654.9 1 2 4439.1 31.37 HUMAN 1 -8.8665 -21.8176 LNQLGADSLTSLRRL-p P20290;S158-p LNQLGADSLTSLRRL 0.331074010334231 0.597637093722794 0.152333333333333 0.05 8.96794978014492 3.026858600483 0.152333333333333 0.05 0.126825044094687 0.498097245362996 1.80281468561375 0.725759934781785 P20290 BTF3 P20290.S158.p_BTF3 P20290_S158s _1_1_158_158 P20290 P20290|P20290-2 Transcription factor BTF3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36911.36911.3 24.76 21.76 2.192 5 1 1 0 903.8077 2629.4432 S158s TMT10 142 (K) QLTEMLPSILNQLGADsLTSLR (R) Q(0.0)LT(0.0)EM(0.0)LPS(0.0)ILN(0.0)QLGADS(0.99)LT(0.0)S(0.0)LR s:Phosphorylated S BTF3 22224.6 16 1 3063.1 61.68 HUMAN 1 8.9679 3.0269 LNQLKLASIDEKNWP-p Q07960;S27-p LNQLKLASIDEKNWP 0.111618830719723 0.0383397269890597 -0.339 -0.263333333333333 19.8946467300059 19.028814222607 -0.339 -0.263333333333333 0.0102455511774038 0.012506004417173 -3.85637681628112 -3.67033004563491 Q07960 ARHGAP1 Q07960.S27.p_ARHGAP1 Q07960_S27s _1_1_27_27 Q07960 Q07960 Rho GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15602.15602.2 10.73 2.04 99 1 1 1 0 657.36 1233.7455 S27s TMT10 25 (K) LAsIDEK (N) LAS(1.0)IDEK K:TMT10,s:Phosphorylated S ARHGAP1 50491.8 2 2 951.1 196.28 HUMAN 1 -19.8946 -19.0288 LNRAATKSPQPTPGR-p O94761;S89-p LNRAATKSPQPTPGR 0.134943548215229 0.0448368954265892 0.282333333333333 0.281 17.840667175984 18.0461411991448 0.282333333333333 0.281 0.0164411912938661 0.0156814378111888 3.43009092713567 3.46876042798186 O94761 RECQL4 O94761.S89.p_RECQL4 O94761_S89s _1_1_89_89 O94761 O94761 ATP-dependent DNA helicase Q4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.4768.4768.2 13.26 8.29 2.1 3 1 1 0 874.9768 1668.9797 S89s TMT10 85 (R) AATKsPQPTPGR (S) AAT(0.0)KS(0.99)PQPT(0.0)PGR K:TMT10,s:Phosphorylated S RECQL4 135071.6 6 1 2196.1 93.8 HUMAN 1 17.8407 18.0461 LNRERPESPMVPSEQ-p Q5T1M5;S979-p LNRERPESPMVPSEQ 0.528881145392789 0.264926969787246 0.084 0.111 5.1192465921312 7.59777831997292 0.084 0.111 0.307663049791577 0.17386900468371 1.12586643304782 1.56482756217442 Q5T1M5 FKBP15 Q5T1M5.S979.p_FKBP15 Q5T1M5_S979s_1_1_979_979 Q5T1M5 Q5T1M5|Q5T1M5-2 FK506-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22730.22942.4 30.32 24.82 4.009 5 1 1 0 984.7343 3839.9435 S979s M981m TMT10 975 (R) ERPEsPmVPSEQVVEEAVPLPPQALTTSQDGHR (R) ERPES(0.99)PM(1.0)VPS(0.0)EQVVEEAVPLPPQALT(0.0)T(0.0)S(0.0)QDGHR s:Phosphorylated S,m:Oxidized methionine FKBP15 134140.9 8 10 173.1 487.64 HUMAN 1 5.1192 7.5978 LNREVAESPRPRRWA-p Q86UU1;S489-p LNREVAESPRPRRWA 0.0948633510902073 0.20249066100712 0.357 -0.489333333333333 21.7592156131436 9.12543580584184 0.357 -0.489333333333334 0.00666927213226435 0.122308437881616 4.26708418646863 -1.82941056826484 Q86UU1 PHLDB1 Q86UU1.S489.p_PHLDB1 Q86UU1_S489s _1_1_489_489 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4761.4761.3 9.73 9.73 99 1 1 1 0 450.5642 1269.7113 S489s TMT10 485 (R) EVAEsPRPR (R) EVAES(1.0)PRPR s:Phosphorylated S PHLDB1 152129.1 1 11 99.1 600.41 HUMAN 1 21.7592 -9.1254 LNRKGLVSPQSPQKS-p P41182;S330-p LNRKGLVSPQSPQKS 0.848075740909989 0.0116884830732904 0.0276666666666667 0.451 1.38485437053527 27.0227059346623 0.0276666666666666 0.451 0.726966775763181 0.00198485783758753 0.367811419102024 5.56729876519509 P41182 BCL6 P41182.S330.p_BCL6 P41182_S330s _1_1_330_330 P41182 P41182|P41182-2 B-cell lymphoma 6 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12682.12682.2 10.35 10.35 1.606 2 1 1 0 789.9365 1498.8993 S330s TMT10 327 (K) GLVsPQSPQK (S) GLVS(0.99)PQS(0.0)PQK K:TMT10,s:Phosphorylated S BCL6 80670.9 4 5 557.1 273.04 HUMAN 1 1.3849 27.0227 LNRKKTLSLVKELDA-p Q96RQ1;S11-p LNRKKTLSLVKELDA 0.0444873405743474 0.00720115107475215 -0.639 -0.471333333333333 30.071201012944 30.656032269805 -0.639 -0.471333333333333 0.000983739021558255 0.000859798677991756 -6.45381591067668 -6.62343078181537 Q96RQ1 ERGIC2 Q96RQ1.S11.p_ERGIC2 Q96RQ1_S11s _1_1_11_11 Q96RQ1 Q96RQ1 Endoplasmic reticulum-Golgi intermediate compartment protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16323.16323.3 9.15 9.15 9.153 2 1 1 0 519.3315 1476.0128 S11s TMT10 8 (K) KTLsLVK (E) KT(0.0)LS(0.99)LVK K:TMT10,s:Phosphorylated S ERGIC2 42833.2 2 1 6840.1 9.15 HUMAN 1 -30.0712 -30.656 LNRLLYNSPEYEASF-p Q7Z2Z1;S292-p LNRLLYNSPEYEASF 0.659007682953711 0.0393169648860673 -0.0613333333333333 -0.411666666666667 3.39783582351036 18.8622583004729 -0.0613333333333333 -0.411666666666667 0.457316022587615 0.0129949367483102 -0.800121081428476 -3.63576314339472 Q7Z2Z1 TICRR Q7Z2Z1.S292.p_TICRR Q7Z2Z1_S292s _1_1_292_292 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24195.24195.2 18.55 13.65 4.059 4 1 1 0 997.9784 1914.9799 S292s TMT10 288 (R) LLYNsPEYEASFPR (M) LLY(0.0)NS(0.99)PEY(0.0)EAS(0.0)FPR s:Phosphorylated S TICRR 212850 4 2 238.1 417.32 HUMAN 1 -3.3978 -18.8623 LNRSPEESFDIKEVK-p Q96S38;S427-p LNRSPEESFDIKEVK 0.0973600331101722 0.465808561845044 -0.385 0.096 21.4418197929847 4.424086319277 -0.385 0.096 0.00717493582089744 0.361069968493312 -4.19544153772492 0.997192242811053 Q96S38 RPS6KC1 Q96S38.S427.p_RPS6KC1 Q96S38_S427s _1_1_427_427 Q96S38 Q96S38 Ribosomal protein S6 kinase delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17644.17644.2 11.43 5.91 3.446 2 1 1 0 795.3975 1509.8201 S427s TMT10 423 (R) SPEEsFDIK (E) S(0.0)PEES(0.99)FDIK K:TMT10,s:Phosphorylated S RPS6KC1 119593.1 2 7 253.1 405.38 HUMAN 1 -21.4418 4.4241 LNSDLRRSPSKPTLA-p Q86XR8;S53-p LNSDLRRSPSKPTLA 0.952442048084725 0.0310889125388133 -0.011 -0.279 0.419174588107773 20.3681468197284 -0.011 -0.279 0.907993085231285 0.00918724542287365 -0.121084881610064 -3.95462011819627 Q86XR8 CEP57 Q86XR8.S53.p_CEP57 Q86XR8_S53s _1_1_53_53 Q86XR8 Q86XR8|Q86XR8-5|Q86XR8-4|Q86XR8-2|F5GYW0|Q86XR8-3|F5H6R3|F5GXS6 Centrosomal protein of 57 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10530.10530.3 15.45 13.85 1.141 6 1 1 0 648.3201 1862.981 S53s Hydrogen 53 (R) sPSKPTLAYPESNSR (A) S(0.99)PS(0.0)KPT(0.0)LAY(0.0)PES(0.0)NS(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S CEP57 57430.3 5 1 5018.1 23.87 HUMAN 1 -0.4192 -20.3681 LNSGRPVTPPRTANP-p P62140;T316-p LNSGRPVTPPRTANP 0.417623570322792 0.813853616701827 0.113 0.0283333333333334 6.99873913892092 1.25286491566413 0.113 0.0283333333333334 0.199584167158674 0.749399688840344 1.4607925035529 0.336122787423058 P62140 PPP1CB P62140.T316.p_PPP1CB P62140_T316t _1_1_316_316 P62140 P62140 Serine/threonine-protein phosphatase PP1-beta catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12617.12617.5 17.9 17.9 2.296 5 1 1 0 582.5109 2828.5572 T316t TMT10 304 (K) YQYGGLNSGRPVtPPRTANPPK (K) Y(0.0)QY(0.0)GGLNS(0.0)GRPVT(0.99)PPRT(0.0)ANPPK K:TMT10,t:Phosphorylated T PPP1CB 37984.9 14 8 1839.2 111.78 HUMAN 1 6.9987 1.2529 LNSHGGRSRSWEDSP-p A0A1B0GTW1;S227-p LNSHGGRSRSWEDSP 0.0658357655531435 0.0179618469735709 -0.976333333333333 -0.823666666666667 25.5330228323288 24.0399761115293 -0.976333333333333 -0.823666666666667 0.00279703381448733 0.00394459471802962 -5.18005421913217 -4.79897762866584 A0A1B0GTW1 NotFound A0A1B0GTW1.S227.p_NotFound A0A1B0GTW1_S227s _1_1_227_227 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.2840.2840.3 8.66 8.66 8.66 2 1 1 0 431.552 1212.6759 S227s TMT10 220 (R) LNSHGGRsR (S) LNS(0.0)HGGRS(0.99)R s:Phosphorylated S TJP2 141123.7 1 2 41.1 827.72 HUMAN 1 -25.533 -24.04 LNSPGPLSPSGMKGT-p P15923-2;S139-p LNSPGPLSPSGMKGT 0.339823573437752 0.0789386845612856 -0.149333333333333 -0.196666666666667 8.72178683350425 14.6366508200011 -0.149333333333333 -0.196666666666667 0.134221261612481 0.0343822994139754 -1.76020380518443 -2.80879979619442 P15923 TCF3 P15923.2.S139.p_TCF3 P15923-2_S139s _1_1_139_139 P15923-2 X6REB3|P15923-3|P15923-2|A0A0A0MRB7 Isoform E47 of Transcription factor E2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.34656.34656.4 27.26 27.26 2.188 5 1 1 0 867.4485 3386.803 S139s TMT10 114 (R) DAGVGGLTQAGFLSGELALNSPGPLsPSGMK (G) DAGVGGLT(0.0)QAGFLS(0.0)GELALNS(0.0)PGPLS(0.99)PS(0.0)GMK K:TMT10,s:Phosphorylated S TCF3 67378 8 1 2913.1 66.09 HUMAN 1 -8.7218 -14.6367 LNSPLDRSGIDITDF-p P49790-3;S343-p LNSPLDRSGIDITDF 0.367895388273898 0.00812647706639742 -0.172666666666667 -0.613333333333333 8.05359783135458 29.7779379501827 -0.172666666666667 -0.613333333333333 0.156545366198772 0.00105246146866823 -1.64445715488419 -6.35486935514344 P49790 NUP153 P49790.3.S343.p_NUP153 P49790-3_S343s _1_1_343_343 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25496.25496.5 25.93 25.93 3.319 6 1 1 0 724.9994 3540.9902 S343s TMT10 327 (K) RIPSIVSSPLNSPLDRsGIDITDFQAKR (E) RIPS(0.0)IVS(0.0)S(0.0)PLNS(0.0)PLDRS(0.99)GIDIT(0.0)DFQAKR K:TMT10,s:Phosphorylated S NUP153 158989.2 5 16 64.1 696.53 HUMAN 1 -8.0536 -29.7779 LNSRLASYLDKVQAL-p P35527;Y167-p LNSRLASYLDKVQAL 0.596617076276074 0.395493367077361 -0.133666666666667 0.155666666666667 4.14062626966111 5.35615969239488 -0.133666666666667 0.155666666666667 0.38542277418384 0.291329209729805 -0.943916779827049 1.16869351314643 P35527 KRT9 P35527.Y167.p_KRT9 P35527_Y167y _1_1_167_167 P35527 P35527|P13645|Q99456|P08779|P02533|P19012|Q04695 Keratin, type I cytoskeletal 9 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11732.11732.2 12.42 9.53 5.687 2 1 1 0 559.787 1038.6033 Y167y Hydrogen 164 (R) LASyLDK (V) LAS(0.0)Y(0.99)LDK K:TMT10-Lys-Only,y:Phosphorylated Y KRT9 62291.5 2 1 287.1 12.42 HUMAN 1 -4.1406 5.3562 LNSSDNQSGGSTASK-p A0A0D9SF53;S28-p LNSSDNQSGGSTASK 0.441027182521617 0.291141176569858 0.109 -0.154333333333333 6.54725244743866 7.07304748780301 0.109 -0.154333333333333 0.221449526110534 0.196198305056212 1.38150536323416 -1.4733824997697 A0A0D9SF53 NotFound A0A0D9SF53.S28.p_NotFound A0A0D9SF53_S28s _1_1_28_28 A0A0D9SF53 A0A0D9SF53|O00571 ATP-dependent RNA helicase DDX3X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28621.28621.4 25.43 22.11 1.141 7 1 1 0 942.9459 3688.7888 S28s Acetyl 2 (M) SHVAVENALGLDQQFAGLDLNSSDNQsGGSTASK (G) S(0.0)HVAVENALGLDQQFAGLDLNS(0.0)S(0.0)DNQS(0.99)GGS(0.0)T(0.0)AS(0.0)K K:TMT10,s:Phosphorylated S DDX3X 82160.2 1 2 1042.1 184.93 HUMAN 1 6.5473 -7.073 LNSTNIQS_______-p O43663;S620-p LNSTNIQS_______ 0.567246377055338 0.813861572663139 0.0893333333333333 0.026 4.53664062196112 1.25241540487721 0.0893333333333334 0.026 0.351832486655169 0.749477258483014 1.01841636449267 0.336014040602305 O43663 PRC1 O43663.S620.p_PRC1 O43663_S620s _1_1_620_620 O43663 O43663|O43663-4|O43663-2 Protein regulator of cytokinesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17860.17860.3 8.93 8.93 2.16 6 1 1 0 606.2892 1736.8864 S620s TMT10 606 (K) SDATSGILNSTNIQs (-) S(0.0)DAT(0.0)S(0.0)GILNS(0.0)T(0.0)NIQS(0.99) s:Phosphorylated S PRC1 72290 1 12 715.1 238.03 HUMAN 1 4.5366 1.2524 LNTAIAVSQMSSGQC-p O75146;S204-p LNTAIAVSQMSSGQC 0.932495418439431 0.204062304723177 0.017 0.130333333333333 0.598514049203226 9.08080069342899 0.017 0.130333333333333 0.871261643587495 0.123571958717672 0.169898061520668 1.82168917091973 O75146 HIP1R O75146.S204.p_HIP1R O75146_S204s _1_1_204_204 O75146 O75146|O75146-2 Huntingtin-interacting protein 1-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17030.17030.3 15.71 15.71 2.678 4 1 1 0 720.6756 2080.0477 S204s TMT10 196 (R) QLNTAIAVsQMSSGQCR (L) QLNT(0.0)AIAVS(0.99)QMS(0.0)S(0.0)GQCR C:Carbamidomethylation,s:Phosphorylated S HIP1R 120070.8 1 1 2470.1 82.04 HUMAN 1 0.5985 9.0808 LNTNELNSNENIHYK-p Q08AD1;S522-p LNTNELNSNENIHYK 0.427864342425449 0.576771579072983 -0.14 -0.0636666666666666 6.78844568708326 3.22291178711157 -0.14 -0.0636666666666666 0.209486205979469 0.476111664153856 -1.42392852948954 -0.765223618922375 Q08AD1 CAMSAP2 Q08AD1.S522.p_CAMSAP2 Q08AD1_S522s _1_1_522_522 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19754.19754.4 22.44 22.44 5.107 4 1 1 0 937.7314 3667.9015 S522s TMT10 511 (K) SCVPLNTNELNsNENIHYKLPNGALQNR (I) S(0.0)CVPLNT(0.0)NELNS(0.99)NENIHY(0.0)KLPNGALQNR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CAMSAP2 169284 4 5 28.2 931.95 HUMAN 1 -6.7884 -3.2229 LNTPLHESDFSGVTP-p Q99459;S390-p LNTPLHESDFSGVTP 0.0853440195899086 0.365565500889268 0.353333333333333 0.130666666666667 22.8794940918837 5.79373080434048 0.353333333333333 0.130666666666667 0.0051528866688148 0.263406761929202 4.525997486298 1.24744263479422 Q99459 CDC5L Q99459.S390.p_CDC5L Q99459_S390s _1_1_390_390 Q99459 Q99459 Cell division cycle 5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17834.17834.3 18.66 18.66 3.936 4 1 1 0 774.3779 2241.1461 S390s TMT10 381 (K) GGLNTPLHEsDFSGVTPQR (Q) GGLNT(0.0)PLHES(0.99)DFS(0.0)GVT(0.0)PQR s:Phosphorylated S CDC5L 92477.2 1 9 751.1 232.35 HUMAN 1 22.8795 5.7937 LNVKGPLSPFNSRAA-p A1L390;S76-p LNVKGPLSPFNSRAA 0.824283520934974 0.1054036446455 0.034 -0.450666666666667 1.61819839446499 12.9103255827814 0.034 -0.450666666666667 0.688938032685581 0.0511643477108958 0.422484951787668 -2.49356371065699 A1L390 PLEKHG3 A1L390.S76.p_PLEKHG3 A1L390_S76s _1_1_76_76 A1L390 A1L390|A1L390-3 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16999.16999.3 10.58 10.58 10.581 2 1 1 0 428.5499 1203.6683 S76s TMT10 73 (K) GPLsPFNSR (A) GPLS(0.99)PFNS(0.0)R s:Phosphorylated S PLEKHG3 135322.7 2 1 284.1 386.18 HUMAN 1 1.6182 -12.9103 LNVRREASSEELKAA-p Q9NVH1;S26-p LNVRREASSEELKAA 0.745323440510582 0.304429861675957 0.051 -0.132666666666667 2.42284023046682 6.82192799706479 0.051 -0.132666666666667 0.572421552159779 0.207877363618091 0.600532548536053 -1.42942032529895 Q9NVH1 DNAJC11 Q9NVH1.S26.p_DNAJC11 Q9NVH1_S26s _1_1_26_26 Q9NVH1 Q9NVH1|Q9NVH1-2|Q9NVH1-3 DnaJ homolog subfamily C member 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9726.9726.2 10.33 3.83 1.114 2 1 1 0 715.863 1350.7517 S26s TMT10 24 (R) EAsSEELK (A) EAS(0.99)S(0.0)EELK K:TMT10,s:Phosphorylated S DNAJC11 63562.2 1 2 3038.1 62.48 HUMAN 1 2.4228 -6.8219 LNYENLPSLPPVWEA-p Q8WU20;S354-p LNYENLPSLPPVWEA 0.685170457210439 0.617397269925403 -0.0553333333333333 -0.0516666666666666 3.08000821635899 2.84755128838048 -0.0553333333333333 -0.0516666666666667 0.492038604799341 0.519092639906068 -0.736616542204893 -0.689180478110332 Q8WU20 FRS2 Q8WU20.S354.p_FRS2 Q8WU20_S354s _1_1_354_354 Q8WU20 Q8WU20 Fibroblast growth factor receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34157.34157.3 10.98 10.98 10.98 3 1 1 0 831.4349 2412.3125 S354s TMT10 344 (R) TALLNYENLPsLPPVWEAR (K) T(0.0)ALLNY(0.0)ENLPS(0.99)LPPVWEAR s:Phosphorylated S FRS2 57427.4 1 10 301.1 376.53 HUMAN 1 -3.08 -2.8476 LPAARAASPYSQRPA-p Q99569;S273-p LPAARAASPYSQRPA 0.476784104106263 0.47255991941738 0.108333333333333 0.0763333333333334 5.92088637627186 4.33972969221334 0.108333333333333 0.0763333333333334 0.255806374386707 0.368151886948827 1.27045731328947 0.981360545124338 Q99569 PKP4 Q99569.S273.p_PKP4 Q99569_S273s _1_1_273_273 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8299.8299.3 11.63 5.71 1.479 5 1 1 0 661.3426 1902.0395 S273s TMT10 271 (R) AAsPYSQRPASPTAIR (R) AAS(0.99)PY(0.0)S(0.0)QRPAS(0.0)PT(0.0)AIR s:Phosphorylated S PKP4 132664.7 3 8 122.1 546.31 HUMAN 1 5.9209 4.3397 LPAGLVGTPPESPSE-p A6NDB9;T151-p LPAGLVGTPPESPSE 0.582647311771369 0.441255704455966 0.147 0.0956666666666667 4.31630462692164 4.73096189805169 0.147 0.0956666666666667 0.37014299720429 0.336437045292678 0.977128947631636 1.05431309508952 A6NDB9 PALM3 A6NDB9.T151.p_PALM3 A6NDB9_T151t _1_1_151_151 A6NDB9 A6NDB9 Paralemmin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27326.27326.5 20.22 20.22 6.476 4 1 1 0 702.3748 3427.8535 T151t TMT10 141 (K) RASLPAGLVGtPPESPSEPREDVLGFLPGPR (Q) RAS(0.0)LPAGLVGT(0.99)PPES(0.0)PS(0.0)EPREDVLGFLPGPR t:Phosphorylated T PALM3 72036.5 1 2 888.1 205.52 HUMAN 1 4.3163 4.731 LPAGTEDYIHIRIQQ-p K7EM18;Y30-p LPAGTEDYIHIRIQQ 0.297265593303929 0.340150920281201 0.146333333333333 -0.093 9.92350987149496 6.20381437417145 0.146333333333333 -0.093 0.101776851768672 0.239672696794748 1.96842451419602 -1.32046712778603 K7EM18 NotFound K7EM18.Y30.p_NotFound K7EM18_Y30y _1_1_30_30 K7EM18 K7EM18|P41567 Eukaryotic translation initiation factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30165.30165.4 20.54 20.72 3.445 5 1 1 0 991.9792 3884.9293 Y30y Acetyl 2 (M) SAIQNLHSFDPFADASKGDDLLPAGTEDyIHIR (I) S(0.0)AIQNLHS(0.0)FDPFADAS(0.0)KGDDLLPAGT(0.0)EDY(0.99)IHIR K:TMT10,y:Phosphorylated Y EIF1 13778.5 1 3 4888.1 25.41 HUMAN 1 9.9235 -6.2038 LPALKLPSPCKSKSL-p Q4KWH8;S1488-p LPALKLPSPCKSKSL 0.600746876542819 0.00404943846968545 -0.0933333333333334 -0.574666666666667 4.08775581764498 35.2370462933122 -0.0933333333333334 -0.574666666666667 0.390143538181834 0.00029943004161643 -0.933867461099929 -8.18188926321344 Q4KWH8 PLCH1 Q4KWH8.S1488.p_PLCH1 Q4KWH8_S1488s _1_1_1488_1488 Q4KWH8 Q4KWH8|Q4KWH8-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26590.26590.4 19.59 19.59 99 1 1 1 0 663.3937 2570.5823 S1488s TMT10 1475 (K) QLAHLPLPALKLPsPCK (S) QLAHLPLPALKLPS(1.0)PCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PLCH1 191330.6 5 15 201.1 451.38 HUMAN 1 -4.0878 -35.237 LPAPGPASVTE____-p Q9BQA1;S339-p LPAPGPASVTE____ 0.973065146401358 0.0349821656512444 0.00766666666666667 0.317333333333333 0.231909330788795 19.6067116485258 0.00766666666666665 0.317333333333333 0.948001592572195 0.0109478499187381 0.0682974339297416 3.79159097401424 Q9BQA1 WDR77 Q9BQA1.S339.p_WDR77 Q9BQA1_S339s _1_1_339_339 Q9BQA1 Q9BQA1|Q9BQA1-2 Methylosome protein 50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28457.28457.5 18.98 18.98 1.223 8 1 1 0 941.0736 4621.3677 S339s TMT10 302 (R) DATWSPLNHSLLTTVGWDHQVVHHVVPTEPLPAPGPAsVTE (-) DAT(0.0)WS(0.0)PLNHS(0.0)LLT(0.0)T(0.0)VGWDHQVVHHVVPT(0.0)EPLPAPGPAS(0.99)VT(0.0)E s:Phosphorylated S WDR77 37465.4 1 2 3359.1 52.9 HUMAN 1 0.2319 19.6067 LPAPTQLSQDQLEAE-p Q13573;S14-p LPAPTQLSQDQLEAE 0.232587423363545 0.0618997260815949 0.215666666666667 0.230666666666667 12.1749539724475 16.0863450862253 0.215666666666667 0.230666666666667 0.0606044623496752 0.0246243905952793 2.36340549837225 3.08259430654517 Q13573 SNW1 Q13573.S14.p_SNW1 Q13573_S14s _1_1_14_14 Q13573 G3V3A4|Q13573 SNW domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36455.36455.3 15.17 15.17 1.637 4 1 1 0 923.1257 2687.3977 S14s Acetyl 2 (M) ALTSFLPAPTQLsQDQLEAEEK (A) ALT(0.0)S(0.0)FLPAPT(0.0)QLS(0.99)QDQLEAEEK K:TMT10,s:Phosphorylated S SNW1 61550.4 1 2 936.1 198.57 HUMAN 1 12.175 16.0863 LPAQEEQTPKASKRE-p Q13111;T722-p LPAQEEQTPKASKRE 0.734217291080444 0.569569296269155 0.113 -0.220666666666667 2.54030029707856 3.29446146541556 0.113 -0.220666666666667 0.557147223121695 0.46833202196038 0.6253889491338 -0.779495946223203 Q13111 CHAF1A Q13111.T722.p_CHAF1A Q13111_T722t _1_1_722_722 Q13111 Q13111|Q13111-3 Chromatin assembly factor 1 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37384.37384.3 13.16 13.16 1.165 2 1 1 0 1029.5284 3006.6011 T722t TMT10 703 (K) VLQQFAACFLETLPAQEEQtPK (A) VLQQFAACFLET(0.0)LPAQEEQT(0.99)PK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CHAF1A 108122.1 2 12 633.1 256.49 HUMAN 1 2.5403 -3.2945 LPAQSAATLPARTQE-p A0A087WUZ3;T2189-p LPAQSAATLPARTQE 0.660298509212809 0.0262485247105981 0.0696666666666667 -0.293333333333333 3.37657506128389 21.4884599650462 0.0696666666666667 -0.293333333333334 0.459560288993569 0.00709829433224146 0.795913958981184 -4.20161267216691 A0A087WUZ3 NotFound A0A087WUZ3.T2189.p_NotFound A0A087WUZ3_T2189t _1_1_2189_2189 A0A087WUZ3 A0A087WUZ3|Q01082 Spectrin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22481.22481.4 20.36 20.36 1.201 6 1 1 0 842.4196 3286.7051 T2189t TMT10 2180 (K) TALPAQSAAtLPARTQETPSAQMEGFLNR (K) T(0.0)ALPAQS(0.0)AAT(0.99)LPART(0.0)QET(0.0)PS(0.0)AQMEGFLNR t:Phosphorylated T SPTBN1 275623.3 3 17 233.1 420.49 HUMAN 1 3.3766 -21.4885 LPARSSGSPKFAMKT-p Q13330;S460-p LPARSSGSPKFAMKT 0.250689107676978 0.0962532584085419 1.21366666666667 -0.823 11.4634444997645 13.440881082139 1.21366666666667 -0.823 0.0713929865571421 0.0452805706875092 2.23750973717354 -2.58934446770201 Q13330 MTA1 Q13330.S460.p_MTA1 Q13330_S460s _1_1_460_460 Q13330 Q13330|E7ESY4|Q13330-3 Metastasis-associated protein MTA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13046.13046.3 8.93 8.93 2.063 3 1 1 0 602.9983 1727.0129 S460s TMT10 457 (R) SSGsPKFAMK (T) S(0.0)S(0.0)GS(0.99)PKFAMK K:TMT10,s:Phosphorylated S MTA1 81469.4 3 4 1200.1 167 HUMAN 1 11.4634 -13.4409 LPAVSVDSPVRYKAS-p X6RAB3;S807-p LPAVSVDSPVRYKAS 0.646466566739135 0.0173615564197841 0.117 -0.739666666666667 3.54805254676476 24.270895760975 0.117 -0.739666666666667 0.441768499750154 0.00374033433456148 0.829689572371628 -4.85562445887321 X6RAB3 NotFound X6RAB3.S807.p_NotFound X6RAB3_S807s _1_1_807_807 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26948.26948.5 22.22 22.22 1.102 5 1 1 0 686.9577 3350.7938 S807s TMT10 787 (K) YSAFQLAPFQDHGLPAVSVDsPVRYK (A) Y(0.0)S(0.0)AFQLAPFQDHGLPAVS(0.0)VDS(0.99)PVRY(0.0)K K:TMT10,s:Phosphorylated S USP6NL 96835.5 1 17 364.1 342.41 HUMAN 1 3.5481 -24.2709 LPCLRRGSLPDTQPS-p Q86Y91-4;S683-p LPCLRRGSLPDTQPS 0.510752656832034 0.013651039737634 0.145 -0.564 5.39327868429324 25.9111493162386 0.145 -0.564 0.288849840171612 0.00256380546165574 1.17566514153317 -5.27141236441865 Q86Y91 KIF18B Q86Y91.4.S683.p_KIF18B Q86Y91-4_S683s _1_1_683_683 Q86Y91-4 Q86Y91-4|Q86Y91-3|A0A0C4DGP5|Q86Y91-2|A0A0C4DGP2 Isoform 4 of Kinesin-like protein KIF18B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6827.6827.3 15.84 15.84 2.555 5 1 1 0 878.4505 2553.3785 S683s TMT10 681 (R) RGsLPDTQPSQGPSTPKGER (A) RGS(0.99)LPDT(0.0)QPS(0.0)QGPS(0.0)T(0.0)PKGER K:TMT10,s:Phosphorylated S KIF18B 96039.4 5 5 959.1 194.54 HUMAN 1 5.3933 -25.9111 LPDGHAASPRGTEAS-p Q9P1Y5;S334-p LPDGHAASPRGTEAS 0.0395731079578075 0.0200356433418179 -0.534333333333333 -0.433333333333333 31.4439541633163 23.2826975915151 -0.534333333333333 -0.433333333333333 0.000717141051529877 0.004696023276088 -6.8837669908823 -4.61632408302727 Q9P1Y5 CAMSAP3 Q9P1Y5.S334.p_CAMSAP3 Q9P1Y5_S334s _1_1_334_334 Q9P1Y5 Q9P1Y5-2 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6395.6395.2 17.17 12.92 99 1 1 1 0 722.8423 1364.712 S334s TMT10 326 (K) DLPDGHAAsPR (G) DLPDGHAAS(1.0)PR s:Phosphorylated S CAMSAP3 135546 4 3 217.1 432.4 HUMAN 1 -31.444 -23.2827 LPDGPLASPARVPMF-p J3KNL6;S1964-p LPDGPLASPARVPMF 0.787952750145453 0.386255993477595 -0.0393333333333333 -0.132 1.99539693510681 5.49189053807744 -0.0393333333333333 -0.132 0.631626447453576 0.282365053702382 -0.507782417246217 -1.1932230599058 J3KNL6 SEC16A J3KNL6.S1964.p_SEC16A J3KNL6_S1964s _1_1_1964_1964 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27095.27095.2 14.57 11.2 2.225 3 1 1 0 1105.5935 2130.212 S1964s TMT10 1949 (R) LLPSAPQTLPDGPLAsPAR (V) LLPS(0.0)APQT(0.0)LPDGPLAS(0.99)PAR s:Phosphorylated S SEC16A 253486.5 4 35 15.1 1143.82 HUMAN 1 -1.9954 -5.4919 LPDGPTGSSEEEEEF-p Q12888-2;S1763-p LPDGPTGSSEEEEEF 0.484351536489608 0.0145535069518938 0.0943333333333333 0.385333333333333 5.79918895541113 25.4401010319115 0.0943333333333333 0.385333333333333 0.263075924009606 0.00285752406671252 1.24870691775743 5.14953615370841 Q12888 TP53BP1 Q12888.2.S1763.p_TP53BP1 Q12888-2_S1763sS1764s_2_2_1763_1764 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31377.31989.4 21.95 19.37 2.172 4 2 2 0 906.6924 3463.8088 S1763s S1764s TMT10 1754 (R) SKLPDGPTGssEEEEEFLEIPPFNK (Q) S(0.0)KLPDGPT(0.0)GS(0.99)S(0.99)EEEEEFLEIPPFNK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 23 111 3.1 2297.07 HUMAN 1 5.7992 25.4401 LPDGQVITIGNERFR-p P63261;T249-p LPDGQVITIGNERFR 0.410331766470424 0.228541705148608 0.157333333333333 0.128666666666667 7.13367365648715 8.44349176606718 0.157333333333333 0.128666666666667 0.193478465527077 0.143103687030919 1.48439239352 1.71144669920391 P63261 ACTG1 P63261.T249.p_ACTG1 P63261_T249t _1_1_249_249 P63261 Q6S8J3|A5A3E0|P68133|P62736|P68032|Q562R1|P63267|P60709|P63261|Q9BYX7|P63267-2 Actin, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24168.24168.3 15.63 15.63 10.332 3 1 1 0 700.6789 2020.0549 T249t TMT10 239 (K) SYELPDGQVItIGNER (F) S(0.0)Y(0.0)ELPDGQVIT(0.99)IGNER t:Phosphorylated T ACTG1 42134.4 2 15 1233.1 163.71 HUMAN 1 7.1337 8.4435 LPDGRVLSPLIIKST-p Q8NCN4;S403-p LPDGRVLSPLIIKST 0.676823734876953 0.00238856624082869 0.0563333333333333 0.703 3.17419464963487 40.2599931641773 0.0563333333333333 0.703 0.481482531252714 9.41891079064208e-05 0.755576471835662 10.2489264450966 Q8NCN4 RNF169 Q8NCN4.S403.p_RNF169 Q8NCN4_S403s _1_1_403_403 Q8NCN4 Q8NCN4 E3 ubiquitin-protein ligase RNF169 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28875.28875.2 12.14 12.14 99 1 1 1 0 710.9507 1340.9281 S403s TMT10 401 (R) VLsPLIIK (S) VLS(1.0)PLIIK K:TMT10,s:Phosphorylated S RNF169 78277 6 7 729.1 236.14 HUMAN 1 3.1742 40.26 LPDPPLESEDEDEEG-p Q16626;S114-p LPDPPLESEDEDEEG 0.454312357362531 0.673812850974228 -0.104333333333333 -0.0403333333333333 6.31944271207446 2.34404591764161 -0.104333333333333 -0.0403333333333333 0.233375751150152 0.582901815855894 -1.34127634796697 -0.583641627573508 Q16626 MEA1 Q16626.S114.p_MEA1 Q16626_S114s _1_1_114_114 Q16626 Q16626 Male-enhanced antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28020.28020.5 22.79 22.79 1.189 4 1 1 0 999.8798 4915.4145 S114s Hydrogen 100 (R) IQALGLHLPDPPLEsEDEDEEGATALNNHSSIPMDPEHVELVK (R) IQALGLHLPDPPLES(0.99)EDEDEEGAT(0.0)ALNNHS(0.0)S(0.0)IPMDPEHVELVK K:TMT10-Lys-Only,s:Phosphorylated S MEA1 19904.3 6 1 4201.1 35.54 HUMAN 1 -6.3194 -2.344 LPDRFVITPRRRYPI-p A8CG34;T204-p LPDRFVITPRRRYPI 0.717979850279593 0.0553723180035418 -0.062 -0.263333333333333 2.71533578582079 16.7431655194637 -0.062 -0.263333333333333 0.535138776556594 0.0211681765025817 -0.661975994155281 -3.20981899856516 A8CG34 NotFound A8CG34.T204.p_NotFound A8CG34_T204t _1_1_204_204 A8CG34 A8CG34|A0A075B7F8 Nuclear envelope pore membrane protein POM 121C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14702.14702.3 9.13 4.28 4.232 2 1 1 0 651.3488 1872.0653 T204t TMT10 193 (R) DRGTLPDRFVItPR (R) DRGT(0.0)LPDRFVIT(0.99)PR t:Phosphorylated T POM121C 125455.9 2 8 133.2 532.02 HUMAN 1 -2.7153 -16.7432 LPDVVFDSPLH____-p Q9UMX1;S481-p LPDVVFDSPLH____ 0.297330507583042 0.56147725709036 0.336333333333333 0.105333333333333 9.9194634498013 3.37826838198881 0.336333333333333 0.105333333333333 0.101871723795462 0.459381140674331 1.96772183767564 0.796129154363926 Q9UMX1 SUFU Q9UMX1.S481.p_SUFU Q9UMX1_S481s _1_1_481_481 Q9UMX1 Q9UMX1 Suppressor of fused homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34374.34374.3 16.52 16.98 16.516 2 1 1 0 616.3236 1766.989 S481s TMT10 471 (K) VSILPDVVFDsPLH (-) VS(0.0)ILPDVVFDS(0.99)PLH s:Phosphorylated S SUFU 54288.1 1 4 2747.1 71.93 HUMAN 1 9.9195 3.3783 LPEAPGLSPLSTEPK-p O60673;S2220-p LPEAPGLSPLSTEPK 0.88077669333009 0.0335244668360361 0.0266666666666667 -0.314333333333333 1.08544729997654 19.8779474612561 0.0266666666666667 -0.314333333333333 0.778852592791184 0.0102850226837624 0.295176751178998 -3.84923154812141 O60673 REV3L O60673.S2220.p_REV3L O60673_S2220s _1_1_2220_2220 O60673 O60673 DNA polymerase zeta catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25506.25506.3 8.15 8.15 1.253 3 1 1 0 692.0469 1994.1574 S2220s TMT10 2213 (R) LPEAPGLsPLSTEPK (T) LPEAPGLS(0.99)PLS(0.0)T(0.0)EPK K:TMT10,s:Phosphorylated S REV3L 356192.6 1 14 524.1 282.7 HUMAN 1 1.0854 -19.8779 LPEGVAVSGPSPAEF-p Q8IXI1;S535-p LPEGVAVSGPSPAEF 0.827168474300756 0.48645817555121 0.0446666666666667 -0.0816666666666667 1.58597715090006 4.18128829992601 0.0446666666666667 -0.0816666666666667 0.694068420617291 0.381830986923044 0.415027932960029 -0.951461679179463 Q8IXI1 RHOT2 Q8IXI1.S535.p_RHOT2 Q8IXI1_S535s _1_1_535_535 Q8IXI1 Q8IXI1 Mitochondrial Rho GTPase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20299.20299.3 7.34 1.82 5.12 2 1 1 0 875.7715 2545.3485 S535s TMT10 526 (K) ADLPEGVAVsGPSPAEFCRK (H) ADLPEGVAVS(0.99)GPS(0.0)PAEFCRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RHOT2 69143.5 1 1 7190.1 7.34 HUMAN 1 1.586 -4.1813 LPEQSPVSYSKRTAY-p Q96K76;S835-p LPEQSPVSYSKRTAY 0.80621185033956 0.475752102513941 0.0646666666666667 -0.111 1.803780624067 4.30267220132213 0.0646666666666667 -0.111 0.660118550844085 0.371306694866202 0.46489562124267 -0.974386977985168 Q96K76 USP47 Q96K76.S835.p_USP47 Q96K76_S835s _1_1_835_835 Q96K76 Q96K76|Q96K76-4|Q96K76-2 Ubiquitin carboxyl-terminal hydrolase 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.34611.34611.3 17.32 17.32 1.113 4 1 1 0 749.0814 2165.2622 S835s TMT10 824 (R) LFVLLPEQSPVsYSK (R) LFVLLPEQS(0.0)PVS(0.99)Y(0.0)S(0.0)K K:TMT10,s:Phosphorylated S USP47 158677.8 1 3 770.1 227.83 HUMAN 1 1.8038 -4.3027 LPETDEKSQEEEFDE-p Q70Z53;S301-p LPETDEKSQEEEFDE 0.283177951218012 0.0155386502938928 -0.239666666666667 0.413333333333333 10.3530163821723 25.002800656325 -0.239666666666667 0.413333333333333 0.0921930879797654 0.00316023904391586 -2.04311379487559 5.03819690914026 Q70Z53 FRA10AC1 Q70Z53.S301.p_FRA10AC1 Q70Z53_S301s _1_1_301_301 Q70Z53 Q70Z53 Protein FRA10AC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.37351.37351.3 16.54 16.54 2.455 3 1 1 0 1148.5353 3363.6197 S301s TMT10 292 (K) GPLPETDEKsQEEEFDEYFQDLFL (-) GPLPET(0.0)DEKS(0.99)QEEEFDEY(0.0)FQDLFL K:TMT10,s:Phosphorylated S FRA10AC1 37946.8 2 3 1518.1 134.45 HUMAN 1 -10.353 25.0028 LPEYNPRTL______-p Q9P258;T521-p LPEYNPRTL______ 0.42112581067315 0.923107390712891 -0.116333333333333 -0.016 6.91889541105548 0.489671254772384 -0.116333333333333 -0.016 0.203287398839987 0.893373106289412 -1.44680868254869 -0.140452177006871 Q9P258 RCC2 Q9P258.T521.p_RCC2 Q9P258_T521t _1_1_521_521 Q9P258 Q9P258 Protein RCC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15431.15431.3 7.19 7.19 7.195 2 1 1 0 590.3307 1689.01 T521t TMT10 513 (K) KLPEYNPRtL (-) KLPEY(0.0)NPRT(0.99)L K:TMT10,t:Phosphorylated T RCC2 56825.2 1 3 2498.1 81.21 HUMAN 1 -6.9189 -0.4897 LPFQNPNSPRRSKSL-p Q14CW9-2;S170-p LPFQNPNSPRRSKSL 0.766697935852592 0.704164329752437 0.048 -0.0426666666666667 2.20992525732159 2.09232275631169 0.048 -0.0426666666666667 0.60118408385512 0.617685952079649 0.554805455912171 -0.529089387639178 Q14CW9 ATXN7L3 Q14CW9.2.S170.p_ATXN7L3 Q14CW9-2_S170s _1_1_170_170 Q14CW9-2 Q14CW9-2 Isoform 2 of Ataxin-7-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27628.27628.3 16.46 11.44 7.888 2 1 1 0 699.6928 2017.0969 S170s TMT10 160 (K) LWYLPFQNPNsPRR (S) LWY(0.0)LPFQNPNS(0.99)PRR s:Phosphorylated S ATXN7L3 40169 2 2 1482.1 138.38 HUMAN 1 2.2099 -2.0923 LPFYAGLSPAGKLVA-p Q8IWI9-4;S1457-p LPFYAGLSPAGKLVA 0.984538976130522 0.00567569454891715 0.00333333333333333 -0.558 0.136866021274986 32.5484046896338 0.00333333333333334 -0.558 0.968976842202752 0.000556108497196134 0.0407232809782858 -7.23377966256058 Q8IWI9 MGA Q8IWI9.4.S1457.p_MGA Q8IWI9-4_S1457s _1_1_1457_1457 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26960.26960.2 16.03 13.35 6.831 2 1 1 0 908.493 1736.0147 S1457s TMT10 1449 (K) GLPFYAGLsPAGK (L) GLPFY(0.0)AGLS(0.99)PAGK K:TMT10,s:Phosphorylated S MGA 338321.5 2 14 141.1 523.06 HUMAN 1 0.1369 -32.5484 LPGPPPASPIPTEGP-p Q9H6A9;S1909-p LPGPPPASPIPTEGP 0.295243174589512 0.774412274013481 0.167 -0.0296666666666667 9.98077703233341 1.53546103128306 0.167 -0.0296666666666666 0.100443606220105 0.702188797961036 1.97837095302767 -0.403235570224792 Q9H6A9 PCNXL3 Q9H6A9.S1909.p_PCNXL3 Q9H6A9_S1909s _1_1_1909_1909 Q9H6A9 Q9H6A9|Q9H6A9-3 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26596.26596.5 19.78 19.8 4.617 6 1 1 0 815.6313 3994.15 S1909s TMT10 1881 (R) SSLSGSGDGRPPPLLQWPPPRLPGPPPAsPIPTEGPR (T) S(0.0)S(0.0)LS(0.0)GS(0.0)GDGRPPPLLQWPPPRLPGPPPAS(0.99)PIPT(0.0)EGPR s:Phosphorylated S PCNX3 224430.8 2 20 168.1 492.45 HUMAN 1 9.9808 -1.5355 LPGQMAGTPITPLKD-p Q9H8Y8-3;T234-p LPGQMAGTPITPLKD 0.0520154613962689 0.00727386000190654 -0.489 -0.461666666666667 27.934919479923 30.591261169814 -0.489 -0.461666666666667 0.00160882220587243 0.000872717898601546 -5.82760747224733 -6.60331349800261 Q9H8Y8 GORASP2 Q9H8Y8.3.T234.p_GORASP2 Q9H8Y8-3_T234t _1_1_234_234 Q9H8Y8-3 Q9H8Y8-3|Q9H8Y8-2 Isoform 3 of Golgi reassembly-stacking protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24810.24810.3 21.75 21.75 2.885 3 1 1 0 840.494 2439.4976 T234t TMT10 224 (K) KISLPGQMAGtPITPLK (D) KIS(0.0)LPGQMAGT(0.99)PIT(0.0)PLK K:TMT10,t:Phosphorylated T GORASP2 48958.5 14 2 992.1 191.2 HUMAN 1 -27.9349 -30.5913 LPGRTAASGAAGDKD-p Q14008-3;S524-p LPGRTAASGAAGDKD 0.0360407965324359 0.709276963247153 0.594333333333333 -0.0423333333333333 33.301599045875 2.05184804592172 0.594333333333334 -0.0423333333333333 0.000467562955753028 0.623469475121993 7.50302579320513 -0.520192812825195 Q14008 CKAP5 Q14008.3.S524.p_CKAP5 Q14008-3_S524s _1_1_524_524 Q14008-3 Q14008-3|Q14008-2 Isoform 3 of Cytoskeleton-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6218.6218.3 10.15 10.15 2.646 3 1 1 0 654.0175 1880.0692 S524s TMT10 521 (R) TAAsGAAGDKDTK (D) T(0.0)AAS(0.99)GAAGDKDT(0.0)K K:TMT10,s:Phosphorylated S CKAP5 228079.2 1 1 1323.1 154.15 HUMAN 1 33.3016 -2.0518 LPGSMIVSSDDTVDS-p Q9UK59;S478-p LPGSMIVSSDDTVDS 0.408116983785071 0.135511913825413 -0.178333333333333 -0.171333333333333 7.1808133096718 11.4410042757151 -0.178333333333333 -0.171333333333333 0.191389747305998 0.0717628325535139 -1.49262799080865 -2.23250473701889 Q9UK59 DBR1 Q9UK59.S478.p_DBR1 Q9UK59_S478sS479s_2_2_478_479 Q9UK59 Q9UK59|Q9UK59-2 Lariat debranching enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25959.25959.5 9.59 9.59 1.111 9 2 2 0 945.6633 4564.3543 S478s S479s TMT10 470 (R) ILPGSMIVssDDTVDSTIDREGKPGGTVESGNGEDLTK (V) ILPGS(0.0)MIVS(0.99)S(0.99)DDT(0.0)VDS(0.0)T(0.0)IDREGKPGGT(0.0)VES(0.0)GNGEDLT(0.0)K K:TMT10,s:Phosphorylated S DBR1 62181.4 2 2 4495.1 30.73 HUMAN 1 -7.1808 -11.441 LPGSRPGSPEREVKR-p Q92993-4;S123-p LPGSRPGSPEREVKR 0.187254795627764 0.74912938463078 -0.212666666666667 -0.037 14.2853840006606 1.73356779236638 -0.212666666666667 -0.037 0.0372787721811658 0.670877490859784 -2.74546764578887 -0.448905820571299 Q92993 KAT5 Q92993.4.S123.p_KAT5 Q92993-4_S123s _1_1_123_123 Q92993-4 Q92993-4|Q92993-2 Isoform 4 of Histone acetyltransferase KAT5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7715.7715.4 12.48 8.54 1.48 2 1 1 0 555.3005 2138.2082 S123s TMT10 114 (K) NGLPGSRPGsPEREVK (R) NGLPGS(0.0)RPGS(0.99)PEREVK K:TMT10,s:Phosphorylated S KAT5 56976.1 6 2 3402.1 51.92 HUMAN 1 -14.2854 -1.7336 LPGSRPGSPEREVPA-p Q92993-3;S123-p LPGSRPGSPEREVPA 0.570565701134658 0.0179936962970703 0.104666666666667 0.342666666666667 4.48421949179491 24.0281691449051 0.104666666666667 0.342666666666667 0.356104982994288 0.00395533329897729 1.00862880545321 4.79609336072122 Q92993 KAT5 Q92993.3.S123.p_KAT5 Q92993-3_S123s_1_1_123_123 Q92993-3 Q92993-3 Isoform 3 of Histone acetyltransferase KAT5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10440.10440.4 17.05 17.05 1.26 4 1 1 0 722.8727 2807.5164 N114n S123s TMT10 114 (K) nGLPGSRPGsPEREVPASAQASGK (T) N(1.0)GLPGS(0.0)RPGS(0.99)PEREVPAS(0.0)AQAS(0.0)GK K:TMT10,n:Deamidated,s:Phosphorylated S KAT5 62538.2 1 1 3402.2 51.92 HUMAN 1 4.4842 24.0282 LPGVDALSNI_____-p P00558;S415-p LPGVDALSNI_____ 0.887353114485877 0.765757030916687 -0.0303333333333333 -0.0356666666666666 1.01218647398879 1.60144945231515 -0.0303333333333333 -0.0356666666666667 0.792102442743707 0.691600111738064 -0.276932488811719 -0.418567019639127 P00558 PGK1 P00558.S415.p_PGK1 P00558_S415s _1_1_415_415 P00558 P00558|P00558-2 Phosphoglycerate kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.33693.33693.2 10.49 10.49 99 1 1 1 0 703.8776 1326.783 S415s TMT10 407 (K) VLPGVDALsNI (-) VLPGVDALS(1.0)NI s:Phosphorylated S PGK1 45013.3 2 4 2813.1 69.65 HUMAN 1 -1.0122 -1.6014 LPGWKGMSVSDLADK-p Q16891-2;S377-p LPGWKGMSVSDLADK 0.836372411785846 0.00380743616490612 0.031 0.706 1.49889831304762 35.8578916926001 0.031 0.706 0.708125393750275 0.00025954390270574 0.394729564514337 8.41545864347149 Q16891 IMMT Q16891.2.S377.p_IMMT Q16891-2_S377s _1_1_377_377 Q16891-2 Q16891-2|Q16891-3|B9A067|C9J406 Isoform 2 of MICOS complex subunit MIC60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18533.18533.2 10.13 7.02 2.251 2 1 1 0 780.8931 1480.8082 S377s TMT10 375 (K) GMsVSDLADK (L) GMS(0.99)VS(0.0)DLADK K:TMT10,s:Phosphorylated S IMMT 83022.6 2 9 1057.1 182.65 HUMAN 1 1.4989 35.8579 LPGYTLKSQLDILSL-p O14686-3;S4874-p LPGYTLKSQLDILSL 0.10941212959015 0.219573377751715 -0.828666666666667 0.336333333333333 20.1233290523093 8.66728237475291 -0.828666666666667 0.336333333333333 0.00972001857283474 0.135916368582921 -3.9054682390042 1.75016433153978 O14686 KMT2D O14686.3.S4874.p_KMT2D O14686-3_S4874s _1_1_4874_4874 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36588.36588.3 10.37 5.18 6.897 2 1 1 0 556.6622 1588.0086 S4874s TMT10 4874 (K) sQLDILSLLK (Q) S(0.99)QLDILS(0.0)LLK K:TMT10,s:Phosphorylated S KMT2D 600227.3 1 45 17.1 1042.08 HUMAN 1 -20.1233 8.6673 LPHEGSPSPGEKAAA-p O15018;S1291-p LPHEGSPSPGEKAAA 0.958739785397171 0.0373113671420933 0.00999999999999999 -0.260333333333333 0.354735599543335 19.1928233444312 0.01 -0.260333333333333 0.92156599238407 0.0120425280220191 0.103140676343369 -3.70453359232451 O15018 PDZD2 O15018.S1291.p_PDZD2 O15018_S1280sS1291s_2_2_1280_1291 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8151.8151.4 8.48 8.48 1.577 3 2 2 0 630.5711 2359.3246 S1280s S1291s TMT10 1278 (K) ARsPVRLPHEGSPsPGEK (A) ARS(0.99)PVRLPHEGS(0.0)PS(0.99)PGEK K:TMT10,s:Phosphorylated S PDZD2 304146 1 41 85.1 628.64 HUMAN 1 0.3547 -19.1928 LPHLRKFSPSQVPVQ-p Q9P1Y5;S814-p LPHLRKFSPSQVPVQ 0.514261110164851 0.0232381276299294 -0.103666666666667 -0.355666666666667 5.33615385379068 22.2970338665504 -0.103666666666667 -0.355666666666667 0.292674317731553 0.00589245959670231 -1.16531881199433 -4.38546746212675 Q9P1Y5 CAMSAP3 Q9P1Y5.S814.p_CAMSAP3 Q9P1Y5_S814s _1_1_814_814 Q9P1Y5 Q9P1Y5-2 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13920.13920.2 9.5 9.5 1.434 3 1 1 0 956.5259 1832.0794 S814s TMT10 812 (R) KFsPSQVPVQTR (S) KFS(0.99)PS(0.0)QVPVQT(0.0)R K:TMT10,s:Phosphorylated S CAMSAP3 135546 3 19 217.1 432.4 HUMAN 1 -5.3362 -22.297 LPHSIKLSRRRSRSK-p Q14498;S121-p LPHSIKLSRRRSRSK 0.285446975514466 0.37404395076967 0.238333333333333 -0.0866666666666667 10.2743211920707 5.66739981159313 0.238333333333333 -0.0866666666666667 0.0938788759110643 0.271181475149129 2.02941232394858 -1.22480251968271 Q14498 RBM39 Q14498.S121.p_RBM39 Q14498_S121s _1_1_121_121 Q14498 Q14498|Q14498-2|G3XAC6 RNA-binding protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16729.16729.3 10.99 10.99 3.627 2 1 1 0 587.0185 1679.0732 S121s TMT10 112 (K) IGLPHSIKLsR (R) IGLPHS(0.0)IKLS(0.99)R K:TMT10,s:Phosphorylated S RBM39 59663.8 2 5 915.1 200.83 HUMAN 1 10.2743 -5.6674 LPHVLLPYMCHGDLL-p Q04912;Y1163-p LPHVLLPYMCHGDLL 0.202846697385928 0.395493367077361 -0.233 0.102666666666667 13.4394025049451 5.35574156774843 -0.233 0.102666666666667 0.0452959893078464 0.291357259311808 -2.59055458964123 1.1686177971205 Q04912 MST1R Q04912.Y1163.p_MST1R Q04912_Y1163y_1_1_1163_1163 Q04912 Q04912|Q04912-2 Macrophage-stimulating protein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.33471.33471.5 8.6 2.95 1.068 1 1 1 0 914.4954 4487.4483 N1139n Y1163y TMT10 1137 (R) GLnHPNVLALIGIMLPPEGLPHVLLPyMCHGDLLQFIR (S) GLN(0.50)HPN(0.50)VLALIGIMLPPEGLPHVLLPY(1.0)MCHGDLLQFIR C:Carbamidomethylation,n:Deamidated,y:Phosphorylated Y MST1R 154836.1 1 3 2414.1 84.51 HUMAN 1 -13.4394 5.3557 LPIKEEPSPISKMRP-p Q9ULH7-5;S932-p LPIKEEPSPISKMRP 0.076673821739413 0.00123467326444358 -0.359 -1.12566666666667 23.9268118240599 47.7618844320182 -0.359 -1.12566666666667 0.00404873001778109 1.67421626506503e-05 -4.77700613927238 -14.2410064559425 Q9ULH7 MKL2 Q9ULH7.5.S932.p_MKL2 Q9ULH7-5_S932s _1_1_932_932 Q9ULH7-5 Q9ULH7-5|Q9ULH7-4 Isoform 5 of MKL/myocardin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21996.21996.4 18.49 18.49 5.63 4 1 1 0 645.3654 2498.4685 S932s TMT10 920 (K) SGEISLPIKEEPsPISK (M) S(0.0)GEIS(0.0)LPIKEEPS(0.99)PIS(0.0)K K:TMT10,s:Phosphorylated S MKL2 119334.1 4 15 464.1 303.55 HUMAN 1 -23.9268 -47.7619 LPIPSEGSGFTKLHL-p J3KN16;S1005-p LPIPSEGSGFTKLHL 0.519755934389913 0.672027602861081 -0.0926666666666667 0.0426666666666667 5.2489113382027 2.3603756557759 -0.0926666666666667 0.0426666666666667 0.298613106945803 0.580714184768716 -1.14948301093849 0.587136344878814 J3KN16 KIAA0368 J3KN16.S1005.p_KIAA0368 J3KN16_S1005s _1_1_1005_1005 J3KN16 J3KN16|Q5VYK3 KIAA0368 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23290.23290.3 14.36 14.36 1.159 3 1 1 0 680.3575 1959.0951 S1005s TMT10 995 (R) NGPLPIPSEGsGFTK (L) NGPLPIPS(0.0)EGS(0.99)GFT(0.0)K K:TMT10,s:Phosphorylated S KIAA0368 225629.8 4 1 4414.1 31.76 HUMAN 1 -5.2489 2.3604 LPITVPKSPAFALKN-p Q9ULW0;S486-p LPITVPKSPAFALKN 0.251085974261154 0.0028998898692722 -0.202666666666667 -0.837 11.4541636619845 38.3421335186369 -0.202666666666667 -0.837 0.0715457159217349 0.000146482805153714 -2.23587531091391 -9.41011097424335 Q9ULW0 TPX2 Q9ULW0.S486.p_TPX2 Q9ULW0_S486s _1_1_486_486 Q9ULW0 Q9ULW0-2 Targeting protein for Xklp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25842.25842.5 17.97 17.97 6.664 2 1 1 0 541.9445 2625.7241 S486s TMT10 477 (K) KVLPITVPKsPAFALK (N) KVLPIT(0.0)VPKS(0.99)PAFALK K:TMT10,s:Phosphorylated S TPX2 86279.1 9 11 599.1 263.33 HUMAN 1 -11.4542 -38.3421 LPKARPMSLSTIAIL-p P42695;S1348-p LPKARPMSLSTIAIL 0.0460471950905122 0.00209694905349103 -0.47 -1.14933333333333 29.6939870750517 41.6888264852117 -0.47 -1.14933333333333 0.00107300388027159 6.77824639060047e-05 -6.33955607943821 -10.9176814025402 P42695 NCAPD3 P42695.S1348.p_NCAPD3 P42695_S1348s _1_1_1348_1348 P42695 P42695 Condensin-2 complex subunit D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26042.26042.4 14.48 14.48 2.296 4 1 1 0 649.8847 2516.5565 S1348s TMT10 1344 (K) ARPMsLSTIAILNSVKK (A) ARPMS(0.99)LS(0.0)T(0.0)IAILNS(0.0)VKK K:TMT10,s:Phosphorylated S NCAPD3 171055.8 2 6 1254.1 161.61 HUMAN 1 -29.694 -41.6888 LPKDYLLSESEDEGD-p Q9BVJ6;S29-p LPKDYLLSESEDEGD 0.208993010347482 0.250567921413579 -0.303 0.115833333333333 13.1225726983118 7.91955113315971 -0.303 0.115833333333333 0.048723977073321 0.16145254181391 -2.53317750736205 1.62069345230584 Q9BVJ6 UTP14A Q9BVJ6.S29.p_UTP14A Q9BVJ6_Y26yS29s_2_2_26_29 Q9BVJ6 Q9BVJ6|Q9BVJ6-3 U3 small nucleolar RNA-associated protein 14 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.35992.36190.5 18.27 20.76 1.426 5 2 2 0 994.287 4807.4616 Y26y S29s TMT10 6 (R) LAESLLALSQQEELADLPKDyLLsESEDEGDNDGERK (H) LAES(0.0)LLALS(0.0)QQEELADLPKDY(0.99)LLS(0.99)ES(0.0)EDEGDNDGERK K:TMT10,y:Phosphorylated Y,s:Phosphorylated S UTP14A 88147.4 5 13 550.1 274.41 HUMAN 2 -13.1226 7.9196 LPKEVNDSPRAADKS-p Q9HCE3;S307-p LPKEVNDSPRAADKS 0.217253177036105 0.00448198400218091 -0.464 0.683333333333333 12.7726222654554 34.4758772844398 -0.464 0.683333333333333 0.052812627340418 0.00035678966970277 -2.47017426477675 7.9032454471433 Q9HCE3 ZNF532 Q9HCE3.S307.p_ZNF532 Q9HCE3_S307s _1_1_307_307 Q9HCE3 Q9HCE3 Zinc finger protein 532 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12791.12791.4 11.55 11.55 2.642 4 1 1 0 810.4196 3158.6896 S307s TMT10 303 (K) EVNDsPRAADKSPESQNLIDGTK (K) EVNDS(0.99)PRAADKS(0.0)PES(0.0)QNLIDGT(0.0)K K:TMT10,s:Phosphorylated S ZNF532 144089.8 3 3 397.1 329.01 HUMAN 1 -12.7726 34.4759 LPKGLSASLPDLDSE-p Q6PKG0;S548-p LPKGLSASLPDLDSE 0.705930856837404 0.374036975811735 0.0523333333333333 -0.092 2.84496363399205 5.66785587384454 0.0523333333333333 -0.092 0.519402022744631 0.271152999277169 0.688742823261652 -1.224884384607 Q6PKG0 LARP1 Q6PKG0.S548.p_LARP1 Q6PKG0_S548s _1_1_548_548 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29096.29096.4 24.46 25.42 2.307 3 1 1 0 717.8895 2788.57 S548s TMT10 544 (K) GLSAsLPDLDSENWIEVKK (R) GLS(0.0)AS(0.99)LPDLDS(0.0)ENWIEVKK K:TMT10,s:Phosphorylated S LARP1 123907.4 47 47 28.1 931.95 HUMAN 1 2.845 -5.6679 LPKKEGLSFLGGLRS-p Q6WKZ4;S300-p LPKKEGLSFLGGLRS 0.279710698049059 0.0404831832852355 0.230333333333333 -0.280333333333333 10.4584516497471 18.671798869013 0.230333333333333 -0.280333333333333 0.089981832831944 0.0135775094300933 2.06148407467456 -3.59643982588313 Q6WKZ4 RAB11FIP1 Q6WKZ4.S300.p_RAB11FIP1 Q6WKZ4_S300s _1_1_300_300 Q6WKZ4 Q6WKZ4|Q6WKZ4-3|E7EX40|Q6WKZ4-2 Rab11 family-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23589.23589.3 10.57 10.57 99 1 1 1 0 572.3268 1634.9994 S300s TMT10 296 (K) KEGLsFLGGLR (S) KEGLS(1.0)FLGGLR K:TMT10,s:Phosphorylated S RAB11FIP1 137564.1 1 5 56.1 721.17 HUMAN 1 10.4585 -18.6718 LPKKSIQSGPLKISS-p Q16891-2;S106-p LPKKSIQSGPLKISS 0.244065722861738 0.735435468052079 0.187333333333333 -0.0356666666666666 11.7174017045546 1.84021527062049 0.187333333333333 -0.0356666666666666 0.0673379404979419 0.654603725936188 2.28230752662904 -0.473065068740083 Q16891 IMMT Q16891.2.S106.p_IMMT Q16891-2_S106s _1_1_106_106 Q16891-2 Q16891|Q16891-4|Q16891-2|Q16891-3|B9A067|C9J406|A0A087WYS0|D6RAW4 Isoform 2 of MICOS complex subunit MIC60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12161.12161.3 9.82 9.82 9.821 2 1 1 0 575.6817 1645.0616 S106s TMT10 102 (K) KSIQsGPLK (I) KS(0.0)IQS(0.99)GPLK K:TMT10,s:Phosphorylated S IMMT 83022.6 2 3 1057.1 182.65 HUMAN 1 11.7174 -1.8402 LPKNYPLSENEDEGD-p Q5TAP6;S28-p LPKNYPLSENEDEGD 0.23918495849275 0.649270660293565 -0.319333333333333 0.0483333333333334 11.8760146067943 2.55857512156396 -0.319333333333333 0.0483333333333334 0.0649229939559367 0.554807710175528 -2.31036217915484 0.629152582663948 Q5TAP6 UTP14C Q5TAP6.S28.p_UTP14C Q5TAP6_S28sS36s_2_2_28_36 Q5TAP6 Q5TAP6 U3 small nucleolar RNA-associated protein 14 homolog C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12145.12145.3 7.46 7.46 3.752 3 2 2 0 891.3799 2512.184 S28s S36s TMT10 24 (K) NYPLsENEDEGDsDGERK (H) NY(0.0)PLS(0.99)ENEDEGDS(0.99)DGERK K:TMT10,s:Phosphorylated S UTP14C 87300.4 1 1 550.2 274.41 HUMAN 1 -11.876 2.5586 LPKVQRPSLKMPKVD-p Q8IVF2;S765-p LPKVQRPSLKMPKVD 0.278656842374099 0.0638436762365753 -0.524 0.226666666666667 10.4923541186569 15.9090087341604 -0.524 0.226666666666667 0.089282139348146 0.0256506944012327 -2.06739432877167 3.04859947423696 Q8IVF2 AHNAK2 Q8IVF2.S765.p_AHNAK2 Q8IVF2_S765s _1_1_765_765 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8682.8682.3 7.12 1.67 99 1 1 1 0 455.9386 1285.8356 S765s TMT10 761 (K) VQRPsLK (M) VQRPS(1.0)LK K:TMT10,s:Phosphorylated S AHNAK2 617759.6 1 9 237.1 418.35 HUMAN 1 -10.4924 15.909 LPLESTKSPAEPSKS-p Q5T1R4;S756-p LPLESTKSPAEPSKS 0.957246455101486 0.786337715024948 0.0103333333333333 -0.0303333333333333 0.371467000653562 1.44880829665903 0.0103333333333333 -0.0303333333333333 0.918022445867589 0.716339946809943 0.107821397292776 -0.382914041879842 Q5T1R4 HIVEP3 Q5T1R4.S756.p_HIVEP3 Q5T1R4_S756s _1_1_756_756 Q5T1R4 Q5T1R4|Q5T1R4-2 Transcription factor HIVEP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15707.15707.3 11.26 11.26 1.474 4 1 1 0 789.1046 2285.332 S756s TMT10 748 (R) NLPLESTKsPAEPSK (S) NLPLES(0.0)T(0.0)KS(0.99)PAEPS(0.0)K K:TMT10,s:Phosphorylated S HIVEP3 261285.6 1 25 465.1 303.46 HUMAN 1 0.3715 -1.4488 LPLLPAESEEEDEME-p A0A1W2PPJ5;S25-p LPLLPAESEEEDEME 0.993752696482329 0.0156300048549032 0.00133333333333333 0.381 0.0554171454704179 24.9666914504207 0.00133333333333332 0.381 0.987320797751888 0.00318662423672108 0.0166391156845784 5.0290796621923 A0A1W2PPJ5 NotFound A0A1W2PPJ5.S25.p_NotFound A0A1W2PPJ5_S25s _1_1_25_25 A0A1W2PPJ5 A0A1W2PPJ5|Q96SW2 Protein cereblon HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23538.23538.4 24.32 19.95 10.647 2 1 1 0 1129.7273 4435.9252 S25s Acetyl 2 (M) AGEGDQQDAAHNMGNHLPLLPAEsEEEDEMEVEDQDSK (E) AGEGDQQDAAHNMGNHLPLLPAES(0.99)EEEDEMEVEDQDS(0.0)K K:TMT10,s:Phosphorylated S CRBN 56750.6 21 1 3708.2 44.8 HUMAN 1 0.0554 24.9667 LPLLPPESPGPLRQR-p A0A0G2JPP5;S853-p LPLLPPESPGPLRQR 0.248603102239219 0.942309811585179 0.184333333333333 -0.00999999999999996 11.5456642212472 0.368809249038194 0.184333333333333 -0.00999999999999994 0.0700541032108851 0.918584419933049 2.25199743809921 -0.107069010498586 A0A0G2JPP5 SCRIB A0A0G2JPP5.S853.p_SCRIB A0A0G2JPP5_S853s _1_1_853_853 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26071.26489.3 19.64 19.64 99 1 1 1 0 636.0151 1826.0647 S853s Hydrogen 841 (R) GGGLRLPLLPPEsPGPLR (Q) GGGLRLPLLPPES(1.0)PGPLR s:Phosphorylated S SCRIB 178690.9 37 19 22.1 1004.81 HUMAN 1 11.5457 -0.3688 LPLNIRNSPFTRGRR-p Q7Z6E9;S873-p LPLNIRNSPFTRGRR 0.506609842161293 0.148903823333033 0.147333333333333 0.304666666666667 5.44606009525862 10.8877201082314 0.147333333333333 0.304666666666667 0.285360587511838 0.0815132087112536 1.18520931862398 2.1354987808586 Q7Z6E9 RBBP6 Q7Z6E9.S873.p_RBBP6 Q7Z6E9_S873s _1_1_873_873 Q7Z6E9 Q7Z6E9|Q7Z6E9-2 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25644.25848.3 15.1 15.1 1.632 2 1 1 0 628.6745 1804.0431 S873s TMT10 865 (R) FLPLNIRNsPFTR (G) FLPLNIRNS(0.99)PFT(0.0)R s:Phosphorylated S RBBP6 202473.6 6 10 27.1 935.6 HUMAN 1 5.4461 10.8877 LPLPPARSPSQESIG-p Q8WXE0;S695-p LPLPPARSPSQESIG 0.885585284476882 0.913549933311602 0.0223333333333333 -0.012 1.04110723719224 0.550586299602461 0.0223333333333333 -0.012 0.786845157329705 0.880929939022146 0.284158196046257 -0.15699420625688 Q8WXE0 CASKIN2 Q8WXE0.S695.p_CASKIN2 Q8WXE0_S695s _1_1_695_695 Q8WXE0 Q8WXE0|Q8WXE0-2 Caskin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34116.34116.4 29.07 29.07 1.355 6 1 1 0 1117.3214 4386.2965 S695s TMT10 664 (R) LLTFQGSELSPELQAAMAGGGPEPLPLPPARsPSQESIGAR (S) LLT(0.0)FQGS(0.0)ELS(0.0)PELQAAMAGGGPEPLPLPPARS(0.99)PS(0.0)QES(0.0)IGAR s:Phosphorylated S CASKIN2 127351.5 8 4 984.1 192.08 HUMAN 1 1.0411 -0.5506 LPLQRLPSQENELLE-p Q96DR7;S222-p LPLQRLPSQENELLE 0.291172119303613 0.0546957890003969 -0.153666666666667 -0.289 10.1030508602457 16.8207325420703 -0.153666666666667 -0.289 0.0976550966039914 0.0207934592583389 -1.99961974421679 -3.22498435696563 Q96DR7 ARHGEF26 Q96DR7.S222.p_ARHGEF26 Q96DR7_S222s _1_1_222_222 Q96DR7 Q96DR7|Q96DR7-4|Q96DR7-3 Rho guanine nucleotide exchange factor 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32107.32107.5 25.57 24.58 12.93 5 1 1 0 760.0182 3716.0998 S222s TMT10 215 (K) LPLQRLPsQENELLENPSVVLSTNSPAALK (V) LPLQRLPS(0.99)QENELLENPS(0.0)VVLS(0.0)T(0.0)NS(0.0)PAALK K:TMT10,s:Phosphorylated S ARHGEF26 97914.4 10 6 478.1 300.31 HUMAN 1 -10.1031 -16.8207 LPLRSSPSPANSTAG-p Q86YI8;S56-p LPLRSSPSPANSTAG 0.918698271107502 0.63949460899186 0.017 -0.0496666666666667 0.717338033123946 2.64458591679111 0.017 -0.0496666666666667 0.84774687333888 0.543927990705507 0.201391055098625 -0.647165770069677 Q86YI8 PHF13 Q86YI8.S56.p_PHF13 Q86YI8_S56s _1_1_56_56 Q86YI8 Q86YI8 PHD finger protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33380.33380.4 22.33 18.15 1.164 11 1 1 0 968.9467 3792.8038 S56s TMT10 53 (R) SSPsPANSTAGTIDSDGWDAGFSDIASSVPLPVSDR (C) S(0.0)S(0.0)PS(0.99)PANS(0.0)T(0.0)AGT(0.0)IDS(0.0)DGWDAGFS(0.0)DIAS(0.0)S(0.0)VPLPVS(0.0)DR s:Phosphorylated S PHF13 34322.9 3 1 2870.1 67.79 HUMAN 1 0.7173 -2.6446 LPLYTSPSLPNITLG-p P56524;S350-p LPLYTSPSLPNITLG 0.28816497283467 0.465011618507812 0.215333333333333 -0.0876666666666667 10.1912482957286 4.434321837859 0.215333333333333 -0.0876666666666667 0.0956918983856027 0.360219995293371 2.01495728434083 -0.999109235329682 P56524 HDAC4 P56524.S350.p_HDAC4 P56524_S350s_1_1_350_350 P56524 P56524|P56524-2 Histone deacetylase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.34911.34911.4 25.42 22.1 1.122 10 1 1 0 1284.9222 5055.6952 S350s N353n TMT10 337 (R) EGSAAPLPLYTSPsLPnITLGLPATGPSAGTAGQQDAERLTLPALQQR (L) EGS(0.0)AAPLPLY(0.0)T(0.0)S(0.0)PS(0.99)LPN(1.0)IT(0.0)LGLPAT(0.0)GPS(0.0)AGT(0.0)AGQQDAERLT(0.0)LPALQQR s:Phosphorylated S,n:Deamidated HDAC4 119836.3 2 3 1282.1 158.68 HUMAN 1 10.1912 -4.4343 LPNLVCCSAKNLRDI-p P50990;S150-p LPNLVCCSAKNLRDI 0.60319435011139 0.616175476545817 0.073 -0.054 4.05374528105467 2.85790879180501 0.073 -0.054 0.393210830927307 0.517856129222167 0.927389212304766 -0.691306768661044 P50990 CCT8 P50990.S150.p_CCT8 P50990_S150s _1_1_150_150 P50990 P50990|P50990-2|P50990-3 T-complex protein 1 subunit theta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19568.19568.3 20.33 20.33 99 1 1 1 0 717.3688 2070.124 S150s TMT10 139 (K) AHEILPNLVCCsAK (N) AHEILPNLVCCS(1.0)AK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCT8 60190.1 2 2 1367.1 149.5 HUMAN 1 4.0537 -2.8579 LPPAAEPSPVSKEQS-p Q9NWT1;S320-p LPPAAEPSPVSKEQS 0.794385697846618 0.0135075261562752 -0.04 -0.412 1.92948462878588 25.9868802802707 -0.04 -0.412 0.641285672547742 0.00251948613060991 -0.493128651888458 -5.29119807692345 Q9NWT1 PAK1IP1 Q9NWT1.S320.p_PAK1IP1 Q9NWT1_S320s _1_1_320_320 Q9NWT1 Q9NWT1 p21-activated protein kinase-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15321.15321.2 16.53 10.83 2.742 3 1 1 0 974.0179 1867.0577 S320s TMT10 311 (K) ESLPPAAEPsPVSK (E) ES(0.0)LPPAAEPS(0.99)PVS(0.0)K K:TMT10,s:Phosphorylated S PAK1IP1 44533.6 7 1 4653.1 28.32 HUMAN 1 -1.9295 -25.9869 LPPAAIESPAVAAPA-p P04792;S65-p LPPAAIESPAVAAPA 0.649214474510535 0.832838827039107 0.064 0.0233333333333334 3.51867547053696 1.11261947060245 0.064 0.0233333333333334 0.444766893652348 0.773994817835022 0.823928194861534 0.301863857362194 P04792 HSPB1 P04792.S65.p_HSPB1 P04792_S65s _1_1_65_65 P04792 P04792|F8WE04 Heat shock protein beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36719.36719.4 26.6 26.6 3.962 7 1 1 0 1101.3016 4322.2236 S65s TMT10 38 (R) LPEEWSQWLGGSSWPGYVRPLPPAAIEsPAVAAPAYSR (A) LPEEWS(0.0)QWLGGS(0.0)S(0.0)WPGY(0.0)VRPLPPAAIES(0.99)PAVAAPAY(0.0)S(0.0)R s:Phosphorylated S HSPB1 22839.1 5 5 357.1 346.69 HUMAN 1 3.5187 1.1126 LPPALVPSPPKRARP-p Q9BWH6;S72-p LPPALVPSPPKRARP 0.94478758147709 0.0178298256387578 0.0113333333333333 -0.335333333333333 0.487852125779305 24.0843775751789 0.0113333333333333 -0.335333333333333 0.89374739180306 0.00390447136839418 0.139968358717877 -4.80983474823254 Q9BWH6 RPAP1 Q9BWH6.S72.p_RPAP1 Q9BWH6_S72s _1_1_72_72 Q9BWH6 Q9BWH6|Q9BWH6-2|H3BRE8 RNA polymerase II-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24800.24800.5 25.26 25.26 20.562 2 1 1 0 919.6752 4514.3978 S72s TMT10 39 (R) GGGDANSDRPPLQDHRDVVMLDNLPDLPPALVPsPPKR (A) GGGDANS(0.0)DRPPLQDHRDVVMLDNLPDLPPALVPS(0.99)PPKR K:TMT10,s:Phosphorylated S RPAP1 154292.4 16 1 996.1 190.51 HUMAN 1 0.4879 -24.0844 LPPCMLKSPKRICPV-p Q9HAW0;S365-p LPPCMLKSPKRICPV 0.0577471851791339 0.00172752646433129 -0.498 -1.22333333333333 27.0175358588203 43.7053953373179 -0.498 -1.22333333333333 0.00198722212646237 4.26049898588349e-05 -5.57358338726215 -11.9304688815714 Q9HAW0 BRF2 Q9HAW0.S365.p_BRF2 Q9HAW0_S365s _1_1_365_365 Q9HAW0 Q9HAW0|Q9HAW0-2 Transcription factor IIIB 50 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23777.23777.4 15.54 15.54 15.54 2 1 1 0 686.6489 2663.6072 S365s TMT10 350 (K) RPASPALLLPPCMLKsPK (R) RPAS(0.0)PALLLPPCMLKS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRF2 47445.5 1 2 2140.1 96.01 HUMAN 1 -27.0175 -43.7054 LPPDGNGSPVLPDKR-p Q8N6S5;S80-p LPPDGNGSPVLPDKR 0.898522472312718 0.0158314452330284 0.0203333333333333 -0.348666666666667 0.909013174446103 24.8819206661452 0.0203333333333333 -0.348666666666667 0.811145349401815 0.00324943559404452 0.250896994328055 -5.00772112216947 Q8N6S5 ARL6IP6 Q8N6S5.S80.p_ARL6IP6 Q8N6S5_S80s _1_1_80_80 Q8N6S5 Q8N6S5 ADP-ribosylation factor-like protein 6-interacting protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17521.17932.4 15.99 13.81 5.574 2 1 1 0 572.3126 2206.2596 S80s TMT10 71 (R) SVLPPDGNGsPVLPDKR (N) S(0.0)VLPPDGNGS(0.99)PVLPDKR K:TMT10,s:Phosphorylated S ARL6IP6 24961.1 16 8 1404.1 146.21 HUMAN 1 0.909 -24.8819 LPPELDISPGAAGGA-p P53621-2;S904-p LPPELDISPGAAGGA 0.249354633077906 0.0243847388506343 -0.296 0.368666666666667 11.508253614706 21.9713390652539 -0.296 0.368666666666667 0.0706601635844099 0.00635135069719437 -2.2454035893331 4.31082745048661 P53621 COPA P53621.2.S904.p_COPA P53621-2_S904s _1_1_904_904 P53621-2 P53621-2 Isoform 2 of Coatomer subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.37018.37018.5 27.12 19.14 7.392 2 1 1 0 930.848 4570.219 S904s TMT10 882 (K) GQEEGGGWDVEEDLELPPELDIsPGAAGGAEDGFFVPPTK (G) GQEEGGGWDVEEDLELPPELDIS(0.99)PGAAGGAEDGFFVPPT(0.0)K K:TMT10,s:Phosphorylated S COPA 140918.9 2 10 545.1 275.81 HUMAN 1 -11.5083 21.9713 LPPFGINSPQALKKI-p Q9Y4G8;S1080-p LPPFGINSPQALKKI 0.447927057943829 0.23307360502819 0.139333333333333 0.133 6.43543286378563 8.32973326147606 0.139333333333333 0.133 0.227225314721755 0.146901650012566 1.36177981296732 1.69175795850293 Q9Y4G8 RAPGEF2 Q9Y4G8.S1080.p_RAPGEF2 Q9Y4G8_S1080s _1_1_1080_1080 Q9Y4G8 Q9Y4G8 Rap guanine nucleotide exchange factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24018.24224.4 15.6 15.6 99 1 1 1 0 598.8467 2312.3945 S1080s TMT10 1072 (K) DLPPFGINsPQALKK (I) DLPPFGINS(1.0)PQALKK K:TMT10,s:Phosphorylated S RAPGEF2 168269.8 2 5 2213.1 93.37 HUMAN 1 6.4354 8.3297 LPPKPEKSSGSEGSS-p Q9C0C2;S1708-p LPPKPEKSSGSEGSS 0.0520154613962689 0.0679011837333028 -0.465333333333333 -0.262333333333333 27.9141473843812 15.5418933011142 -0.465333333333333 -0.262333333333333 0.0016165355564519 0.0279132670072648 -5.82176026203241 -2.97868460984915 Q9C0C2 TNKS1BP1 Q9C0C2.S1708.p_TNKS1BP1 Q9C0C2_S1708s _1_1_1708_1708 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27520.27520.3 11.95 11.95 1.165 5 1 1 0 729.3679 2106.1232 S1708s TMT10 1708 (K) sSGSEGSSPNWLQALK (L) S(0.99)S(0.0)GS(0.0)EGS(0.0)S(0.0)PNWLQALK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 4 71 4.1 2105.7 HUMAN 1 -27.9141 -15.5419 LPPLPPLSPPPPSSA-p Q9BQW3-1;S88-p LPPLPPLSPPPPSSA 0.166246459389339 0.845772025039165 0.297 -0.0323333333333333 15.586294500416 1.02215314403859 0.297 -0.0323333333333333 0.0276293424933846 0.79028672271525 2.98915153599902 -0.279398513906378 Q9BQW3 EBF4 Q9BQW3.1.S88.p_EBF4 Q9BQW3-1_S88s _1_1_88_88 Q9BQW3-1 Q9BQW3-1 Isoform 1 of Transcription factor COE4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37728.37728.4 21.13 21.13 9.198 5 1 1 0 717.9106 2788.6538 S88s TMT10 77 (R) LLLLLPPLPPLsPPPPSSAPAASASR (M) LLLLLPPLPPLS(0.99)PPPPS(0.0)S(0.0)APAAS(0.0)AS(0.0)R s:Phosphorylated S EBF4 68915.5 2 1 5272.1 21.13 HUMAN 1 15.5863 -1.0222 LPPMSPLSFDPASEE-p Q7Z4H7;S409-p LPPMSPLSFDPASEE 0.109204251400589 0.0128638579984636 0.353666666666667 0.585333333333333 20.146388116162 26.3367464095573 0.353666666666667 0.585333333333333 0.00966854645801715 0.00232447756582999 3.91043749897872 5.38330504444723 Q7Z4H7 HAUS6 Q7Z4H7.S409.p_HAUS6 Q7Z4H7_S406sS409s_2_2_406_409 Q7Z4H7 Q7Z4H7|Q7Z4H7-3|Q5VY60|Q7Z4H7-2 HAUS augmin-like complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37565.37565.4 13.22 13.22 2.491 6 2 2 0 888.6784 3391.7536 S406s S409s TMT10 394 (K) GWTPSVDLLPPMsPLsFDPASEEVYAK (S) GWT(0.0)PS(0.0)VDLLPPMS(0.99)PLS(0.99)FDPAS(0.0)EEVY(0.0)AK K:TMT10,s:Phosphorylated S HAUS6 109703.4 1 10 1302.1 156.27 HUMAN 1 20.1464 26.3367 LPPPAPGSPAAPAAV-p H0Y494;S34-p LPPPAPGSPAAPAAV 0.612076431940578 0.182244779739047 0.071 -0.157333333333333 3.95299684974851 9.72558856739911 0.071 -0.157333333333333 0.402439235231902 0.106522449183691 0.908134204344047 -1.93331502089364 H0Y494 SIK3 H0Y494.S34.p_SIK3 H0Y494_S34s _1_1_34_34 H0Y494 J3KPC8|H0Y494 Serine/threonine-protein kinase SIK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20054.20054.4 19.14 15.17 19.142 3 1 1 0 794.6805 3095.7316 S34s TMT10 26 (R) LLPPPAPGsPAAPAAVSPAAGQPRPPAPASR (G) LLPPPAPGS(0.99)PAAPAAVS(0.0)PAAGQPRPPAPAS(0.0)R s:Phosphorylated S SIK3 139782.1 1 1 1025.2 187.04 HUMAN 1 3.953 -9.7256 LPPPARRSPMDSLLH-p O75064;S1092-p LPPPARRSPMDSLLH 0.249755827314177 0.304834419061826 0.205666666666667 -0.138 11.4987215609763 6.81405660708847 0.205666666666667 -0.138 0.0708154214097372 0.208254473529864 2.24372399755136 -1.42803983919379 O75064 DENND4B O75064.S1092.p_DENND4B O75064_S1092s _1_1_1092_1092 O75064 O75064 DENN domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16682.16682.3 14.22 13.05 6.533 2 1 1 0 487.9091 1381.7459 S1092s TMT10 1092 (R) sPMDSLLHPR (E) S(0.99)PMDS(0.0)LLHPR s:Phosphorylated S DENND4B 165840.7 1 6 1759.1 117.11 HUMAN 1 11.4987 -6.8141 LPPPKQPSPSPPMSV-p Q9HA38;S16-p LPPPKQPSPSPPMSV 0.932495418439431 0.205526118619509 0.017 0.14 0.598514049203227 9.04170730899638 0.017 0.14 0.871261643587495 0.124689323618761 0.169898061520668 1.81492679705821 Q9HA38 ZMAT3 Q9HA38.S16.p_ZMAT3 Q9HA38_S16s _1_1_16_16 Q9HA38 Q9HA38|Q9HA38-2 Zinc finger matrin-type protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31637.31637.4 14.54 14.54 1.755 4 1 1 0 786.6734 3063.7049 S16s Acetyl 1 (-) MILLQHAVLPPPKQPsPSPPMSVATR (S) MILLQHAVLPPPKQPS(0.99)PS(0.0)PPMS(0.0)VAT(0.0)R K:TMT10,s:Phosphorylated S ZMAT3 32629.4 3 1 6030.1 14.54 HUMAN 1 0.5985 9.0417 LPPPLIPTPPPDDPR-p Q9NRS6;T148-p LPPPLIPTPPPDDPR 0.505031370996872 0.128972970347564 0.0983333333333333 -0.166666666666667 5.47973911956108 11.7245926078571 0.0983333333333333 -0.166666666666667 0.283156208245793 0.067226536834793 1.19129170968444 -2.28246989419547 Q9NRS6 SNX15 Q9NRS6.T148.p_SNX15 Q9NRS6_T148t _1_1_148_148 Q9NRS6 Q9NRS6|Q9NRS6-2 Sorting nexin-15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32876.32876.5 23.16 17.4 7.945 2 1 1 0 684.1764 3336.8881 T148t TMT10 137 (R) DLHILPPPLIPtPPPDDPRLSQLLPAER (R) DLHILPPPLIPT(0.99)PPPDDPRLS(0.0)QLLPAER t:Phosphorylated T SNX15 38347.3 4 1 1316.1 154.83 HUMAN 1 5.4797 -11.7246 LPPRTRNSGIWESPE-p O15085-2;S1335-p LPPRTRNSGIWESPE 0.534872388605867 0.225199800874114 0.0836666666666667 0.120666666666667 5.03074285176583 8.52713868997053 0.0836666666666667 0.120666666666667 0.313997156227179 0.140373824024823 1.10968893427906 1.72592020669816 O15085 ARHGEF11 O15085.2.S1335.p_ARHGEF11 O15085-2_S1335s _1_1_1335_1335 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22497.22497.3 19.12 19.12 5.787 6 1 1 0 1092.8352 3196.5232 S1335s Hydrogen 1334 (R) NsGIWESPELDRNLAEDASSTEAAGGYK (V) NS(0.99)GIWES(0.0)PELDRNLAEDAS(0.0)S(0.0)T(0.0)EAAGGY(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S ARHGEF11 173153.4 10 16 228.1 424.05 HUMAN 1 5.0307 8.5271 LPPSPVPSPRRFSSR-p G1UD79;S160-p LPPSPVPSPRRFSSR 0.23680319102318 0.359313798237497 -0.192333333333333 -0.161 11.987320637014 5.89834365827462 -0.192333333333333 -0.161 0.0632802135798461 0.257137628469433 -2.33008581860312 -1.26613668820613 G1UD79 FAM122B G1UD79.S160.p_FAM122B G1UD79_S160s _1_1_160_160 G1UD79 G1UD79|Q7Z309-3|Q7Z309-2|Q7Z309-4|Q7Z309-5 Protein FAM122B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24205.24205.3 10.63 10.63 1.137 5 1 1 0 684.3464 1971.0571 S160s TMT10 146 (K) MFVSSSGLPPSPVPsPR (R) MFVS(0.0)S(0.0)S(0.0)GLPPS(0.0)PVPS(0.99)PR s:Phosphorylated S SPACIA2 29414.5 1 7 835.1 215.14 HUMAN 1 -11.9873 -5.8983 LPPSTKKSGQKPVLD-p Q9Y6G9;S487-p LPPSTKKSGQKPVLD 0.427336576301028 0.825871152479839 -0.155666666666667 0.0456666666666667 6.80129852571712 1.16220207534317 -0.155666666666667 0.0456666666666667 0.208867153180421 0.765208512164931 -1.42618475279956 0.314052774110049 Q9Y6G9 DYNC1LI1 Q9Y6G9.S487.p_DYNC1LI1 Q9Y6G9_S487s _1_1_487_487 Q9Y6G9 Q9Y6G9|E9PHI6 Cytoplasmic dynein 1 light intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14920.14920.3 14.81 14.81 99 1 1 1 0 734.7282 2122.2021 S487s TMT10 487 (K) sGQKPVLDVHAELDR (I) S(1.0)GQKPVLDVHAELDR K:TMT10,s:Phosphorylated S DYNC1LI1 56863.4 2 14 510.1 287.75 HUMAN 1 -6.8013 1.1622 LPPTPMNSLVDECPL-p Q86TP1;S414-p LPPTPMNSLVDECPL 0.20228767245005 0.526857895615428 -0.249 -0.0746666666666667 13.464667159302 3.73890126016283 -0.249 -0.0746666666666667 0.0450332493178998 0.422775560500091 -2.59514430216907 -0.866739404254006 Q86TP1 PRUNE Q86TP1.S414.p_PRUNE Q86TP1_T410tS414s_2_2_410_414 Q86TP1 Q86TP1|Q86TP1-2|Q86TP1-3|Q86TP1-4|Q86TP1-7|Q86TP1-5|Q86TP1-6 Exopolyphosphatase PRUNE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33202.33202.5 23.16 16.43 2.129 6 2 2 0 939.8425 4519.2624 T410t M412m S414s TMT10 390 (R) ASNSLISGLSQDEEDPPLPPtPmNsLVDECPLDQGLPK (L) AS(0.0)NS(0.0)LIS(0.0)GLS(0.0)QDEEDPPLPPT(0.99)PM(1.0)NS(0.99)LVDECPLDQGLPK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,m:Oxidized methionine,s:Phosphorylated S PRUNE1 50826.3 12 5 3186.1 58.23 HUMAN 1 -13.4647 -3.7389 LPQEHAESPDVRGRL-p A0A087WUZ3;S817-p LPQEHAESPDVRGRL 0.932900490324811 0.536803439950128 -0.0153333333333333 0.0603333333333333 0.595061710774994 3.63589044474246 -0.0153333333333333 0.0603333333333333 0.871954511221534 0.432923295301241 -0.168973296607455 0.846722693287901 A0A087WUZ3 NotFound A0A087WUZ3.S817.p_NotFound A0A087WUZ3_S817s _1_1_817_817 A0A087WUZ3 A0A087WUZ3|Q01082|Q01082-2|Q01082-3 Spectrin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22395.22395.4 20.43 20.43 7.777 5 1 1 0 1028.5015 4030.9944 S817s TMT10 788 (K) DVAEEIANYRPTLDTLHEQASALPQEHAEsPDVR (G) DVAEEIANY(0.0)RPT(0.0)LDT(0.0)LHEQAS(0.0)ALPQEHAES(0.99)PDVR s:Phosphorylated S SPTBN1 275623.3 1 1 233.1 420.49 HUMAN 1 -0.5951 3.6359 LPQGMLNSPTICQTF-p P63128;S1091-p LPQGMLNSPTICQTF 0.411382195733206 0.188277658963683 0.141333333333333 0.183 7.1174015225912 9.53847470297863 0.141333333333333 0.183 0.19420474988864 0.111212225006672 1.48154848752632 1.90089771285857 P63128 NotFound P63128.S1091.p_NotFound P63128_S1091sT1093tT1097t_3_3_1091_1097 P63128 P63128 Endogenous retrovirus group K member 9 Pol protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.37619.37619.4 8.83 2.15 99 3 3 3 0 1072.554 4031.2694 M1088m S1091s T1093t T1097t TMT10 1079 (R) FQWKVLPQGmLNsPtICQtFVGRALQPVK (V) FQWKVLPQGM(1.0)LNS(1.0)PT(1.0)ICQT(1.0)FVGRALQPVK K:TMT10,C:Carbamidomethylation,m:Oxidized methionine,s:Phosphorylated S,t:Phosphorylated T ERVK-9 124759.1 2 1 6891.1 8.83 HUMAN 1 7.1174 9.5385 LPQLKARSPQELDQG-p Q13671;S210-p LPQLKARSPQELDQG 0.120260347431319 0.0175738606294931 -0.339333333333333 -0.337333333333333 19.1250364542058 24.1924327056523 -0.339333333333333 -0.337333333333334 0.0122319685162569 0.00380852428696488 -3.69363891031342 -4.83632606684336 Q13671 RIN1 Q13671.S210.p_RIN1 Q13671_S210s _1_1_210_210 Q13671 Q13671 Ras and Rab interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30658.30658.4 24.85 24.85 1.903 3 1 1 0 975.4995 3819.0052 S210s TMT10 208 (K) ARsPQELDQGTGAALCFFNPLFPGDLGPTKR (E) ARS(0.99)PQELDQGT(0.0)GAALCFFNPLFPGDLGPT(0.0)KR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RIN1 84953.2 3 1 2540.1 79.24 HUMAN 1 -19.125 -24.1924 LPQLMAPTPPGLRNS-p Q96HP0;T2029-p LPQLMAPTPPGLRNS 0.846398595977906 0.349876322487766 0.0453333333333333 -0.0893333333333333 1.40140585150945 6.04740301919382 0.0453333333333334 -0.0893333333333333 0.724201491389011 0.248461840564786 0.371742357007458 -1.29269385280744 Q96HP0 DOCK6 Q96HP0.T2029.p_DOCK6 Q96HP0_T2029t _1_1_2029_2029 Q96HP0 Q96HP0 Dedicator of cytokinesis protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27125.27125.2 9.87 6.17 99 1 1 1 0 850.4629 1619.9505 T2029t TMT10 2022 (R) LPQLMAPtPPGLR (N) LPQLMAPT(1.0)PPGLR t:Phosphorylated T DOCK6 231436.7 9 6 1743.1 118.18 HUMAN 1 1.4014 -6.0474 LPQLSKGSPEEPVVG-p A0A0D9SGJ8;S541-p LPQLSKGSPEEPVVG 0.965844044823815 0.581064576863464 -0.00633333333333334 -0.0536666666666667 0.291985197507331 3.18204159509269 -0.00633333333333334 -0.0536666666666667 0.934978189862735 0.480613361569826 -0.0854474603435998 -0.757040554485202 A0A0D9SGJ8 NotFound A0A0D9SGJ8.S541.p_NotFound A0A0D9SGJ8_S541s _1_1_541_541 A0A0D9SGJ8 A0A0D9SGJ8|Q2TAK8-3|J3KNX4|Q2TAK8-2 PWWP domain-containing protein MUM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25292.25292.4 14.59 9.81 2.149 4 1 1 0 1022.0596 4005.241 S541s TMT10 524 (K) SIQQDVLGTKLPQLSKGsPEEPVVGCPLGQR (Q) S(0.0)IQQDVLGT(0.0)KLPQLS(0.0)KGS(0.99)PEEPVVGCPLGQR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MUM1 82198.8 2 4 2892.1 66.68 HUMAN 1 -0.292 -3.182 LPQNDDHYVMQEHRK-p C9J1X3;Y316-p LPQNDDHYVMQEHRK 0.325026618688949 0.177169515262384 0.354333333333333 -0.518666666666667 9.14387268339388 9.88625314079471 0.354333333333333 -0.518666666666667 0.121790308808838 0.102653718539093 1.83327089250097 -1.96117241736596 C9J1X3 TNK2 C9J1X3.Y316.p_TNK2 C9J1X3_Y316y _1_1_316_316 C9J1X3 Q07912-3|C9J1X3|Q07912-2 Activated CDC42 kinase 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.9591.9591.4 22.74 22.74 99 1 1 1 0 630.5641 2439.2603 Y316y TMT10 308 (R) ALPQNDDHyVMQEHRK (V) ALPQNDDHY(1.0)VMQEHRK K:TMT10,y:Phosphorylated Y TNK2 115861.1 2 1 12.1 93.88 HUMAN 1 9.1439 -9.8863 LPQNIQFSPSAKLQE-p Q8TBC4;S377-p LPQNIQFSPSAKLQE 0.656414826447476 0.0259143241385632 0.0603333333333333 0.342333333333333 3.43032778786111 21.5750145204145 0.0603333333333333 0.342333333333333 0.453907356270978 0.0069582262824924 0.806539858573112 4.22106380843877 Q8TBC4 UBA3 Q8TBC4.S377.p_UBA3 Q8TBC4_S377s _1_1_377_377 Q8TBC4 Q8TBC4|Q8TBC4-2|F8W8D4 NEDD8-activating enzyme E1 catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19828.19828.3 19.86 19.86 3.106 3 1 1 0 938.7842 2734.3693 S377s TMT10 362 (K) ENCPACSQLPQNIQFsPSAK (L) ENCPACS(0.0)QLPQNIQFS(0.99)PS(0.0)AK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UBA3 52536.1 3 1 5378.1 19.86 HUMAN 1 3.4303 21.575 LPQPEVLSPTVKGKL-p Q8IWI9-4;S1195-p LPQPEVLSPTVKGKL 0.123776415797331 0.107190265202259 -0.575333333333333 -0.279333333333333 18.8675147190054 12.8128233987731 -0.575333333333333 -0.279333333333333 0.0129792180346736 0.0523260148496608 -3.64001140897772 -2.47605758524102 Q8IWI9 MGA Q8IWI9.4.S1195.p_MGA Q8IWI9-4_S1195s _1_1_1195_1195 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.31342.31342.3 16.59 16.59 4.151 2 1 1 0 723.7622 2089.3037 S1195s TMT10 1185 (K) PLLLPQPEVLsPTVK (G) PLLLPQPEVLS(0.99)PT(0.0)VK K:TMT10,s:Phosphorylated S MGA 338321.5 3 10 141.1 523.06 HUMAN 1 -18.8675 -12.8128 LPQPPRESPQLHERE-p Q9BR39;S469-p LPQPPRESPQLHERE 0.267884306972317 0.959623777854305 0.157333333333333 -0.00833333333333332 10.8416215085043 0.257779043685611 0.157333333333333 -0.00833333333333334 0.0823830467189785 0.942371396480421 2.12838526303313 -0.0757014134905135 Q9BR39 JPH2 Q9BR39.S469.p_JPH2 Q9BR39_S469s _1_1_469_469 Q9BR39 Q9BR39 Junctophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34911.35318.5 22.39 22.39 5.08 3 1 1 0 891.4605 4373.3051 S469s TMT10 438 (R) LLQEILENSESLLEPPDRGAGAAGLPQPPREsPQLHER (E) LLQEILENS(0.0)ES(0.0)LLEPPDRGAGAAGLPQPPRES(0.99)PQLHER s:Phosphorylated S JPH2 74448.4 9 4 1028.1 186.58 HUMAN 1 10.8416 -0.2578 LPRARGTSPEHLKQH-p Q96PX6;S358-p LPRARGTSPEHLKQH 0.820904102287946 0.0198168067084765 0.0413333333333333 0.508333333333333 1.64988608321743 23.3605720476054 0.0413333333333333 0.508333333333334 0.683929586730229 0.00461256814351446 0.429790810402674 4.634890817705 Q96PX6 CCDC85A Q96PX6.S358.p_CCDC85A Q96PX6_S358s _1_1_358_358 Q96PX6 Q96PX6 Coiled-coil domain-containing protein 85A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5260.5260.3 7.62 6.5 1.664 2 1 1 0 393.1986 1097.6152 S358s Hydrogen 356 (R) GTsPEHLK (Q) GT(0.0)S(0.99)PEHLK K:TMT10-Lys-Only,s:Phosphorylated S CCDC85A 60659.2 1 6 1994.1 103.61 HUMAN 1 1.6499 23.3606 LPRGNAPSPAPPPPP-p Q96DN6;S211-p LPRGNAPSPAPPPPP 0.615350842498504 0.609686832288102 0.081 0.055 3.91360684253999 2.92044078155476 0.081 0.055 0.406105915597286 0.510453189561448 0.900579063351671 0.704108745858471 Q96DN6 MBD6 Q96DN6.S211.p_MBD6 Q96DN6_S211s _1_1_211_211 Q96DN6 Q96DN6 Methyl-CpG-binding domain protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29717.29717.4 19.41 19.41 2.473 4 1 1 0 773.8947 3012.5893 S211s TMT10 207 (R) GNAPsPAPPPPPAISLNAPSYNWGAALR (S) GNAPS(0.99)PAPPPPPAIS(0.0)LNAPS(0.0)Y(0.0)NWGAALR s:Phosphorylated S MBD6 101883.9 3 3 2682.1 74.08 HUMAN 1 3.9136 2.9204 LPRGSPHSDLKERTV-p O75376-2;S1300-p LPRGSPHSDLKERTV 0.21817205150345 0.038853936371035 0.185666666666667 0.337666666666667 12.7431557591109 18.9403729862773 0.185666666666667 0.337666666666667 0.0531721748358732 0.0127632918878723 2.46488633298882 3.65195409288926 O75376 NCOR1 O75376.2.S1300.p_NCOR1 O75376-2_S1300s _1_1_1300_1300 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8376.8587.4 10.53 10.53 1.694 2 1 1 0 454.7519 1736.0219 S1300s TMT10 1292 (R) ALPRGSPHsDLK (E) ALPRGS(0.0)PHS(0.99)DLK K:TMT10,s:Phosphorylated S NCOR1 259453.1 1 11 35.1 889.74 HUMAN 1 12.7432 18.9404 LPRLRRFSPSQVPIQ-p Q08AD1;S1019-p LPRLRRFSPSQVPIQ 0.964995630930211 0.00843307160301812 -0.008 -0.449666666666667 0.29912730259305 29.4554738726032 -0.00799999999999997 -0.449666666666667 0.933441853362784 0.0011335811426921 -0.0874724504322197 -6.25846218049774 Q08AD1 CAMSAP2 Q08AD1.S1019.p_CAMSAP2 Q08AD1_S1019s _1_1_1019_1019 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13980.13980.3 11.34 8.27 1.275 3 1 1 0 575.6406 1644.9383 S1019s TMT10 1017 (R) RFsPSQVPIQTR (S) RFS(0.99)PS(0.0)QVPIQT(0.0)R s:Phosphorylated S CAMSAP2 169284 5 21 28.2 931.95 HUMAN 1 -0.2991 -29.4555 LPRMQRPSLPDLSRP-p Q8TF74;S155-p LPRMQRPSLPDLSRP 0.327394528659194 0.0324348072387578 -0.141333333333333 0.426666666666667 9.07175156112807 20.0920669870797 -0.141333333333333 0.426666666666667 0.123829706592002 0.00979023916528821 -1.82078428205496 3.89507063546645 Q8TF74 WIPF2 Q8TF74.S155.p_WIPF2 Q8TF74_S155s _1_1_155_155 Q8TF74 Q8TF74|Q8TF74-2 WAS/WASL-interacting protein family member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15685.15685.4 10.87 6.63 3.765 7 1 1 0 711.3651 2762.4693 S155s TMT10 151 (R) MQRPsLPDLSRPNTTSSTGMK (H) MQRPS(0.99)LPDLS(0.0)RPNT(0.0)T(0.0)S(0.0)S(0.0)T(0.0)GMK K:TMT10,s:Phosphorylated S WIPF2 46344.7 2 3 952.1 196.18 HUMAN 1 -9.0718 20.0921 LPSALSASKSNLVIS-p I3L4C2;S294-p LPSALSASKSNLVIS 0.693977037937363 0.142054521664747 -0.065 -0.167 2.97584358088037 11.1695089862728 -0.065 -0.164687512816243 0.503982715147204 0.0763922147801347 -0.715501573150375 -2.18483027919316 I3L4C2 BAIAP2 I3L4C2.S294.p_BAIAP2 I3L4C2_S294s _1_1_294_294 I3L4C2 I3L4C2|Q9UQB8|Q9UQB8-2|Q9UQB8-6|Q9UQB8-4|Q9UQB8-5|Q9UQB8-3|B4DWA1 Brain-specific angiogenesis inhibitor 1-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29234.29853.4 24.59 24.59 1.154 5 1 1 0 703.3775 2730.5224 S294s TMT10 273 (R) AVQLMQQVASNGATLPSALSAsK (S) AVQLMQQVAS(0.0)NGAT(0.0)LPS(0.0)ALS(0.0)AS(0.99)K K:TMT10,s:Phosphorylated S BAIAP2 61608.4 25 5 386.1 333.05 HUMAN 1 -2.9758 -11.1695 LPSANQGSPFKSALS-p Q56NI9;S75-p LPSANQGSPFKSALS 0.314368771925545 0.000952253650599092 0.194 -1.96866666666667 9.40394428551952 57.4359065283645 0.194 -1.96866666666667 0.114711133566446 1.80471798843329e-06 1.87831361294745 -21.6147534851513 Q56NI9 ESCO2 Q56NI9.S75.p_ESCO2 Q56NI9_S75s _1_1_75_75 Q56NI9 Q56NI9|E5RFE4 N-acetyltransferase ESCO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15608.15608.5 15.72 15.72 5.379 4 1 1 0 480.457 2318.2869 S75s TMT10 62 (K) TTEINRLPSANQGsPFK (S) T(0.0)T(0.0)EINRLPS(0.0)ANQGS(0.99)PFK K:TMT10,s:Phosphorylated S ESCO2 69275.7 4 3 3025.1 62.91 HUMAN 1 9.4039 -57.4359 LPSASRASPTPLASP-p A0A1B0GTL5;S634-p LPSASRASPTPLASP 0.839690365234234 0.0200510267309114 0.029 -0.340333333333333 1.46551207939721 23.2727529652476 0.029 -0.340333333333333 0.713590060302046 0.00470678871453467 0.386889326647966 -4.61395661606217 A0A1B0GTL5 NotFound A0A1B0GTL5.S634.p_NotFound A0A1B0GTL5_S634s _1_1_634_634 A0A1B0GTL5 A0A1B0GTL5 Rab11 family-interacting protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12915.12915.3 9.05 9.05 1.165 3 1 1 0 521.9575 1483.8885 S634s TMT10 633 (R) AsPTPLASPGK (A) AS(0.99)PT(0.0)PLAS(0.0)PGK K:TMT10,s:Phosphorylated S RAB11FIP5 139038.8 2 12 714.1 238.09 HUMAN 1 1.4655 -23.2728 LPSDEDESGTEESDN-p Q9ULH0-4;S1507-p LPSDEDESGTEESDN 0.248650960362662 0.0175936501308428 -0.261666666666667 -0.363 11.5417767447013 24.1787567135611 -0.261666666666667 -0.363 0.0701168384325346 0.00382053628460351 -2.25131210285333 -4.83296773491677 Q9ULH0 KIDINS220 Q9ULH0.4.S1507.p_KIDINS220 Q9ULH0-4_S1507s _1_1_1507_1507 Q9ULH0-4 Q9ULH0-4|Q9ULH0-2|Q9ULH0-5 Isoform 4 of Kinase D-interacting substrate of 220 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17264.17264.4 18.78 18.78 1.228 6 1 1 0 988.2474 3869.995 S1507s TMT10 1497 (R) YQKLPSDEDEsGTEESDNTPLLKDDK (D) Y(0.0)QKLPS(0.0)DEDES(0.99)GT(0.0)EES(0.0)DNT(0.0)PLLKDDK K:TMT10,s:Phosphorylated S KIDINS220 196163.1 4 13 306.1 373.6 HUMAN 1 -11.5418 -24.1788 LPSDKAPTPPGKGAA-p Q12893;T329-p LPSDKAPTPPGKGAA 0.235118035263392 0.16009496838476 -0.403333333333333 0.170333333333333 12.0454717151836 10.4650706390844 -0.403333333333333 0.170333333333333 0.0624385528067147 0.0898447978970615 -2.34040258394477 2.06175999026934 Q12893 TMEM115 Q12893.T329.p_TMEM115 Q12893_T329t _1_1_329_329 Q12893 Q12893 Transmembrane protein 115 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16261.16261.4 16.43 16.43 3.518 3 1 1 0 594.0812 2293.3371 T329t TMT10 318 (K) VDSPLPSDKAPtPPGK (G) VDS(0.0)PLPS(0.0)DKAPT(0.99)PPGK K:TMT10,t:Phosphorylated T TMEM115 38424.5 9 1 2781.1 70.83 HUMAN 1 -12.0455 10.4651 LPSDLRRSVLEDMED-p Q7Z6Z7;S3072-p LPSDLRRSVLEDMED 0.806508385970829 0.107345719291196 -0.0576666666666667 -0.287333333333333 1.79935311699138 12.8010205970963 -0.0576666666666667 -0.287333333333333 0.660791865835787 0.0524684144374953 -0.463894145072284 -2.47394037915243 Q7Z6Z7 HUWE1 Q7Z6Z7.S3072.p_HUWE1 Q7Z6Z7_S3072s _1_1_3072_3072 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.37138.37138.3 23.65 20.11 11.997 2 1 1 0 1079.2032 3155.6278 S3072s TMT10 3072 (R) sVLEDMEDSVLAVMPPDIAAEAQALRR (E) S(0.99)VLEDMEDS(0.0)VLAVMPPDIAAEAQALRR s:Phosphorylated S HUWE1 485818.9 2 46 11.1 1210.45 HUMAN 1 -1.7994 -12.801 LPSDSGFSDPESEAK-p Q8TEK3;S1035-p LPSDSGFSDPESEAK 0.664059615597144 0.0149080933883694 -0.085 -0.386 3.32705217011302 25.2851856443801 -0.085 -0.386 0.464830677994972 0.00296129337865508 -0.786092283416668 -5.10989721848369 Q8TEK3 DOT1L Q8TEK3.S1035.p_DOT1L Q8TEK3_S1035s _1_1_1035_1035 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21561.21561.4 24.15 24.15 2.2 5 1 1 0 946.2253 3701.9113 S1035s TMT10 1012 (R) LGGAAQGPLPEASKGDLPSDSGFsDPESEAK (R) LGGAAQGPLPEAS(0.0)KGDLPS(0.0)DS(0.0)GFS(0.99)DPES(0.0)EAK K:TMT10,s:Phosphorylated S DOT1L 185648.6 2 16 132.1 534.85 HUMAN 1 -3.3271 -25.2852 LPSERADSPAGPESS-p J3KQR7;S712-p LPSERADSPAGPESS 0.699189099199276 0.307196318679301 -0.0606666666666667 0.143333333333333 2.92017141548334 6.77338633648616 -0.0606666666666667 0.143333333333333 0.510484850805197 0.21021386940962 -0.704151044923224 1.42090451925172 J3KQR7 NotFound J3KQR7.S712.p_NotFound J3KQR7_S712s _1_1_712_712 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11031.11031.3 9.79 3.44 7.027 4 1 1 0 820.4131 2379.2578 S712s TMT10 701 (R) RLPQLPSERADsPAGPESSR (R) RLPQLPS(0.0)ERADS(0.99)PAGPES(0.0)S(0.0)R s:Phosphorylated S CEP170B 172326.6 2 15 51.1 746.11 HUMAN 1 -2.9202 6.7734 LPSFRNKSPAPVPVT-p Q8TDM0-3;S165-p LPSFRNKSPAPVPVT 0.487979346315651 0.18121908422023 -0.103 0.133333333333333 5.74123748319924 9.75721803246557 -0.103 0.133333333333333 0.266609887530147 0.105749469346875 -1.2383267594677 1.9387974425899 Q8TDM0 BCAS4 Q8TDM0.3.S165.p_BCAS4 Q8TDM0-3_S165s _1_1_165_165 Q8TDM0-3 Q8TDM0-3 Isoform 3 of Breast carcinoma-amplified sequence 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24574.24574.3 15.78 15.78 4.421 5 1 1 0 861.8066 2503.4325 S165s TMT10 163 (R) NKsPAPVPVTYELPTLYR (T) NKS(0.99)PAPVPVT(0.0)Y(0.0)ELPT(0.0)LY(0.0)R K:TMT10,s:Phosphorylated S BCAS4 22608.5 2 1 5864.1 15.78 HUMAN 1 -5.7412 9.7572 LPSLEVLSDQEEDRE-p Q9BQI3;S258-p LPSLEVLSDQEEDRE 0.877965189707424 0.0264325817251409 0.0243333333333333 0.322 1.1124111509727 21.4241185180132 0.0243333333333333 0.322 0.774031945219261 0.00720423959934888 0.301842661145718 4.18718846648493 Q9BQI3 EIF2AK1 Q9BQI3.S258.p_EIF2AK1 Q9BQI3_S258s _1_1_258_258 Q9BQI3 Q9BQI3|Q9BQI3-2 Eukaryotic translation initiation factor 2-alpha kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26725.26725.4 17.94 17.77 2.489 2 1 1 0 814.1599 3173.64 S258s TMT10 247 (R) AAIELPSLEVLsDQEEDREQCGVK (N) AAIELPS(0.0)LEVLS(0.99)DQEEDREQCGVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EIF2AK1 71675.7 4 1 2626.1 76.5 HUMAN 1 1.1124 21.4241 LPSLPVGSDSEGPEN-p Q8NC74;S392-p LPSLPVGSDSEGPEN 0.949715369091024 0.295232287727978 -0.0106666666666667 0.178 0.44329251478721 6.99424595753394 -0.0106666666666667 0.178 0.902964649981725 0.199790762443075 -0.127744127402808 1.45960303854276 Q8NC74 RBBP8NL Q8NC74.S392.p_RBBP8NL Q8NC74_S392s _1_1_392_392 Q8NC74 Q8NC74 RBBP8 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23771.23771.4 20.44 20.44 1.23 5 1 1 0 762.6028 2967.4203 S392s TMT10 377 (R) GQPTPGEMLPSLPVGsDSEGPENEGTR (A) GQPT(0.0)PGEMLPS(0.0)LPVGS(0.99)DS(0.0)EGPENEGT(0.0)R s:Phosphorylated S RBBP8NL 71886.7 3 11 565.1 270.89 HUMAN 1 -0.4433 6.9942 LPSLRALSCLRNPLT-p Q15813-2;S389-p LPSLRALSCLRNPLT 0.206108312152609 0.0201646139627176 -0.37 0.329 13.2659679686362 23.2210339846794 -0.37 0.329 0.0471414789276725 0.00476317569821403 -2.55910521514441 4.6016569549316 Q15813 TBCE Q15813.2.S389.p_TBCE Q15813-2_S389s _1_1_389_389 Q15813-2 Q15813-2 Isoform 2 of Tubulin-specific chaperone E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20948.20948.3 9.16 9.16 4.24 2 1 1 0 604.3399 1731.0351 S389s TMT10 387 (R) ALsCLRNPLTK (E) ALS(0.99)CLRNPLT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TBCE 65706.2 1 2 4388.1 32.16 HUMAN 1 -13.266 23.221 LPSPEAESGVDRGEP-p Q53F19;S30-p LPSPEAESGVDRGEP 0.126867028860092 0.559621521937856 0.35 0.115 18.6004155422258 3.39832502508606 0.35 0.115 0.0138025219280999 0.457264512119849 3.5848135786261 0.800096673465855 Q53F19 NCBP3 Q53F19.S30.p_NCBP3 Q53F19_S25sS30s_2_2_25_30 Q53F19 Q53F19 Nuclear cap-binding protein subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28636.28636.4 15.21 15.21 99 2 2 2 0 1189.5684 4595.3137 S25s S30s TMT10 13 (K) AEAPAGPALGLPsPEAEsGVDRGEPEPMEVEEGELEIVPVRR (S) AEAPAGPALGLPS(1.0)PEAES(1.0)GVDRGEPEPMEVEEGELEIVPVRR s:Phosphorylated S NCBP3 70705.4 2 6 1350.1 150.87 HUMAN 1 18.6004 3.3983 LPSQDNVSLTSTETP-p Q96CC6;S133-p LPSQDNVSLTSTETP 0.263859982002435 0.076763783434572 0.159333333333333 0.217333333333333 10.9798546866568 14.7915575276027 0.159333333333333 0.217333333333333 0.0798021388324674 0.033177545026234 2.15258042275356 2.83762807811586 Q96CC6 RHBDF1 Q96CC6.S133.p_RHBDF1 Q96CC6_S133s_1_1_133_133 Q96CC6 Q96CC6|F8WBS4 Inactive rhomboid protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30070.30070.4 12.78 12.78 1.499 7 1 1 0 1018.2571 3973.0339 N131n S133s M152m TMT10 123 (R) ELDLPSQDnVsLTSTETPPPLYVGPCQLGmQK (I) ELDLPS(0.0)QDN(1.0)VS(0.99)LT(0.0)S(0.0)T(0.0)ET(0.0)PPPLY(0.0)VGPCQLGM(1.0)QK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S,m:Oxidized methionine RHBDF1 98996.6 10 3 1411.1 145.35 HUMAN 1 10.9799 14.7916 LPSQEAPSFQGTESP-p Q6PJF5;S171-p LPSQEAPSFQGTESP 0.565711149743452 0.620749587807368 0.0773333333333333 0.0646666666666667 4.55913415425046 2.81671634512305 0.076653958567484 0.0646666666666667 0.350014941974675 0.522791316617552 1.02260960118048 0.682840419323728 Q6PJF5 RHBDF2 Q6PJF5.S171.p_RHBDF2 Q6PJF5_S166sS171s_2_2_166_171 Q6PJF5 Q6PJF5|Q6PJF5-2 Inactive rhomboid protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20850.20850.5 13.28 10.56 2.646 4 2 2 0 776.3885 3718.0002 S166s S171s TMT10 161 (R) DLELPsQEAPsFQGTESPKPCKMPK (I) DLELPS(0.99)QEAPS(0.99)FQGT(0.0)ES(0.0)PKPCKMPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RHBDF2 98224.8 6 9 1595.1 129.07 HUMAN 1 4.5591 2.8167 LPSRDDATPVRDEPM-p Q7Z6E9;T984-p LPSRDDATPVRDEPM 0.443392613792182 0.0263581786161247 -0.127333333333333 0.300333333333333 6.51092410560645 21.4584904305849 -0.127333333333333 0.300333333333333 0.223309700679237 0.00714744721880777 -1.37510108389666 4.19489032728592 Q7Z6E9 RBBP6 Q7Z6E9.T984.p_RBBP6 Q7Z6E9_T984t _1_1_984_984 Q7Z6E9 Q7Z6E9 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22922.22939.5 20.77 14.64 2.382 8 1 1 0 1050.1339 5166.6508 T984t TMT10 960 (K) SREPTGVEENKTDSLFVLPSRDDAtPVRDEPMDAESITFK (S) S(0.0)REPT(0.0)GVEENKT(0.0)DS(0.0)LFVLPS(0.0)RDDAT(0.99)PVRDEPMDAES(0.0)IT(0.0)FK K:TMT10,t:Phosphorylated T RBBP6 202473.6 2 12 27.1 935.6 HUMAN 1 -6.5109 21.4585 LPSRLQASQVKLKSK-p Q9BXW9;S319-p LPSRLQASQVKLKSK 0.281655667968343 0.00118417822026653 0.211666666666667 -1.02866666666667 10.4027355793361 48.3310236418427 0.211666666666667 -1.02866666666667 0.0911436553352869 1.46858008922312e-05 2.05177458671167 -14.5973368349525 Q9BXW9 FANCD2 Q9BXW9.S319.p_FANCD2 Q9BXW9_S319s _1_1_319_319 Q9BXW9 Q9BXW9-1|Q9BXW9-3 Fanconi anemia group D2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12426.12426.2 9.64 2.77 99 1 1 1 0 656.3749 1231.7774 S319s TMT10 316 (R) LQAsQVK (L) LQAS(1.0)QVK K:TMT10,s:Phosphorylated S FANCD2 165894.1 2 2 960.1 194.41 HUMAN 1 10.4027 -48.331 LPSRPGASRSGGLEE-p A7E2V4-4;S519-p LPSRPGASRSGGLEE 0.410331766470424 0.0749614176596904 -0.171333333333333 -0.368 7.13348209626039 14.9348253138028 -0.171333333333333 -0.368 0.193486999735471 0.0321009192108791 -1.4843589174451 -2.86437734930741 A7E2V4 ZSWIM8 A7E2V4.4.S519.p_ZSWIM8 A7E2V4-4_S519s _1_1_519_519 A7E2V4-4 A7E2V4-2|A7E2V4-4|A7E2V4-3|S4R410 Isoform 4 of Zinc finger SWIM domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5974.5974.3 9.48 9.48 2.812 2 1 1 0 440.9046 1240.7323 S519s TMT10 511 (R) ALPSRPGAsR (S) ALPS(0.0)RPGAS(0.99)R s:Phosphorylated S ZSWIM8 199945.4 1 4 805.1 222.5 HUMAN 1 -7.1335 -14.9348 LPSSGRSSLGSHQLP-p O95817;S195-p LPSSGRSSLGSHQLP 0.375226204548174 0.0159739793091579 -0.188666666666667 -0.626 7.87754659115657 24.8175335281744 -0.188666666666667 -0.626 0.163021671175411 0.00329796959310552 -1.61391081085661 -4.99154069747139 O95817 BAG3 O95817.S195.p_BAG3 O95817_S195s _1_1_195_195 O95817 O95817 BAG family molecular chaperone regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7446.7446.2 12.79 5.37 1.341 3 1 1 0 695.8553 1310.7378 S195s TMT10 194 (R) SsLGSHQLPR (G) S(0.0)S(0.99)LGS(0.0)HQLPR s:Phosphorylated S BAG3 61764.7 4 4 416.1 321.05 HUMAN 1 -7.8775 -24.8175 LPSSSPRSPSGLRPR-p P49815-4;S1429-p LPSSSPRSPSGLRPR 0.915977072362704 0.277413640669151 0.0473333333333333 0.197666666666667 0.746702777060909 7.33705104407249 0.0473333333333333 0.197666666666667 0.842034182866047 0.184626865103877 0.20907618434896 1.51945248029036 P49815 TSC2 P49815.4.S1429.p_TSC2 P49815-4_S1429s _1_1_1429_1429 P49815-4 P49815|P49815-4|P49815-2|P49815-3 Isoform 4 of Tuberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3822.3822.2 11.97 3.86 3.861 2 1 1 0 475.2345 869.4952 S1429s Hydrogen 1429 (R) sPSGLRPR (G) S(0.99)PS(0.0)GLRPR s:Phosphorylated S TSC2 200147.7 2 23 214.1 435.34 HUMAN 1 0.7467 7.3371 LPSTNGQSPGKAIEN-p Q96T23;S1375-p LPSTNGQSPGKAIEN 0.104209357384164 0.0264325817251409 0.697333333333333 -0.354666666666667 20.7040560386508 21.4248012253543 0.697333333333333 -0.354666666666667 0.00850343499626936 0.00720310718783933 4.031704150861 -4.18734136091576 Q96T23 RSF1 Q96T23.S1375.p_RSF1 Q96T23_S1375s_1_1_1375_1375 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.33452.33656.4 18.54 18.54 1.322 7 1 1 0 1131.3723 4441.5 N1372n S1375s TMT10 1357 (K) VGSPLDYSLVDLPSTnGQsPGKAIENLIGKPTEK (S) VGS(0.0)PLDY(0.0)S(0.0)LVDLPS(0.0)T(0.0)N(0.99)GQS(0.99)PGKAIEN(0.0)LIGKPT(0.0)EK K:TMT10,n:Deamidated,s:Phosphorylated S RSF1 165358.1 10 24 39.1 857.38 HUMAN 1 20.7041 -21.4248 LPTGEGQSGRAALRD-p E9PHH0;S639-p LPTGEGQSGRAALRD 0.288174796119179 0.0865230698455862 0.522333333333333 0.523666666666667 10.1892014515195 14.0717451194491 0.522333333333333 0.523666666666667 0.0957370089222845 0.0391584495638915 2.01460123271331 2.70446810351473 E9PHH0 MBD5 E9PHH0.S639.p_MBD5 E9PHH0_S639s_1_1_639_639 E9PHH0 E9PHH0|Q9P267 Methyl-CpG-binding domain protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34718.34718.5 9.12 3.61 0 14 1 1 0 1002.6261 4892.3013 N598n N604n N613n N621n M623m N629n M630m S639s TMT10 594 (K) LAGNnSSSSSnSGAVAGSGnTEGHSTLnTmFPPTAnmLLPTGEGQsGR (A) LAGN(0.33)N(0.33)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)N(0.33)S(0.0)GAVAGS(0.0)GN(0.99)T(0.0)EGHS(0.0)T(0.0)LN(0.99)T(0.0)M(1.0)FPPT(0.0)AN(0.99)M(1.0)LLPT(0.0)GEGQS(0.99)GR n:Deamidated,m:Oxidized methionine,s:Phosphorylated S MBD5 185049 1 4 3416.1 51.66 HUMAN 1 10.1892 14.0717 LPTKLEKSPKPESTC-p Q9Y6V0-5;S1052-p LPTKLEKSPKPESTC 0.110108569193373 0.333100933381518 -0.413666666666667 -0.213666666666667 20.0471615375853 6.32721330981537 -0.413666666666667 -0.213666666666667 0.00989199404496058 0.232958557804171 -3.88907905767693 -1.34231552368848 Q9Y6V0 PCLO Q9Y6V0.5.S1052.p_PCLO Q9Y6V0-5_S1052s _1_1_1052_1052 Q9Y6V0-5 Q9Y6V0-5|Q9Y6V0-6|Q9Y6V0-2 Isoform 5 of Protein piccolo HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11865.11865.3 9.99 9.99 9.985 3 1 1 0 724.3775 2091.1545 S1052s TMT10 1052 (K) sPKPESTCPLCK (T) S(0.99)PKPES(0.0)T(0.0)CPLCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PCLO 562515 1 8 1007.1 189 HUMAN 1 -20.0472 -6.3272 LPTPKCHTPPLYRMR-p Q02543;T24-p LPTPKCHTPPLYRMR 0.193166030157494 0.683727107106312 0.26 0.0606666666666667 13.9386290752061 2.26018419495144 0.26 0.0606666666666667 0.0403772830650876 0.594266953760678 2.68165758492758 0.565611757553111 Q02543 RPL18A Q02543.T24.p_RPL18A Q02543_T24t _1_1_24_24 Q02543 Q02543|M0R117 60S ribosomal protein L18a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6460.6460.2 9.79 5.71 2.678 2 1 1 0 676.8237 1272.672 T24t TMT10 22 (K) CHtPPLYR (M) CHT(0.99)PPLY(0.0)R C:Carbamidomethylation,t:Phosphorylated T RPL18A 21047.3 2 2 1623.1 126.57 HUMAN 1 13.9386 2.2602 LPTPPGLSPGDLDVF-p Q6P1N0;S674-p LPTPPGLSPGDLDVF 0.79813572883131 0.11643364946654 -0.0383333333333333 -0.259666666666667 1.89007017594837 12.3208722305755 -0.0383333333333333 -0.259666666666667 0.647132158908404 0.0586020457217666 -0.484317281440353 -2.38815183919385 Q6P1N0 CC2D1A Q6P1N0.S674.p_CC2D1A Q6P1N0_S674s _1_1_674_674 Q6P1N0 Q6P1N0|Q6P1N0-2 Coiled-coil and C2 domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36814.36814.3 22.13 22.13 2.088 2 1 1 0 791.7514 2293.2753 S674s TMT10 664 (K) GINLPTPPGLsPGDLDVFVR (F) GINLPT(0.0)PPGLS(0.99)PGDLDVFVR s:Phosphorylated S CC2D1A 104460 1 7 1492.1 137.02 HUMAN 1 -1.8901 -12.3209 LPTPTKMTPRSRILV-p P06400;T826-p LPTPTKMTPRSRILV 0.0576036189507777 0.00106567586669276 -0.497333333333333 -1.34433333333333 27.0797164354467 50.4290565795376 -0.497333333333333 -1.34433333333333 0.00195897257682324 9.05929375096773e-06 -5.59053269291168 -15.9861862876135 P06400 RB1 P06400.T826.p_RB1 P06400_T826t _1_1_826_826 P06400 P06400 Retinoblastoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17535.17535.3 15.36 9.56 2.164 4 1 1 0 689.3758 1986.1458 T826t TMT10 815 (K) ISEGLPTPTKMtPR (S) IS(0.0)EGLPT(0.0)PT(0.0)KMT(0.99)PR K:TMT10,t:Phosphorylated T RB1 107013.3 4 11 155.1 502.88 HUMAN 1 -27.0797 -50.4291 LPTRRAQTPPISSLP-p Q15751;T2701-p LPTRRAQTPPISSLP 0.346406800486096 0.945747460858941 0.141333333333333 -0.0073333333333333 8.55552532350763 0.349870758852187 0.141333333333333 -0.00733333333333331 0.139459295718333 0.922598882250167 1.73142069250989 -0.101767442005407 Q15751 HERC1 Q15751.T2701.p_HERC1 Q15751_T2701t _1_1_2701_2701 Q15751 Q15751 Probable E3 ubiquitin-protein ligase HERC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14769.14769.3 18.64 15.36 2.131 6 1 1 0 802.0735 2324.2408 T2701t TMT10 2699 (R) AQtPPISSLPTSPSDEVGRR (Q) AQT(0.99)PPIS(0.0)S(0.0)LPT(0.0)S(0.0)PS(0.0)DEVGRR t:Phosphorylated T HERC1 539122.1 7 14 269.1 394.57 HUMAN 1 8.5555 -0.3499 LPTTVPESPNYRNTR-p Q6PKG0;S774-p LPTTVPESPNYRNTR 0.581059694963249 0.109333006519697 0.08 -0.225333333333333 4.33656717209428 12.6980083365964 0.08 -0.225333333333333 0.368420071744239 0.0537278134261315 0.980942425284795 -2.45547940302133 Q6PKG0 LARP1 Q6PKG0.S774.p_LARP1 Q6PKG0_S774s_1_1_774_774 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13400.13400.3 15.83 11.1 2.654 6 1 1 0 714.6871 2061.0926 S774s N776n TMT10 766 (R) SLPTTVPEsPnYRNTR (T) S(0.0)LPT(0.0)T(0.0)VPES(0.99)PN(0.99)Y(0.0)RN(0.0)T(0.0)R s:Phosphorylated S,n:Deamidated LARP1 123907.4 23 54 28.1 931.95 HUMAN 1 4.3366 -12.698 LPTVLPGSPSKTRGQ-p K7ERV3;S13-p LPTVLPGSPSKTRGQ 0.80621185033956 0.00360332108061802 0.0343333333333333 -0.672 1.80345429405571 36.3453607305435 0.0343333333333333 -0.672 0.660168154188487 0.000231987148607822 0.464821824036817 -8.60292867667077 K7ERV3 NotFound K7ERV3.S13.p_NotFound K7ERV3_S13s _1_1_13_13 K7ERV3 K7ERV3|P04183|K7ES52|K7ENW5 Thymidine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28858.29477.3 17.05 17.05 5.023 4 1 1 0 640.9949 1841.004 S13s Acetyl 2 (M) SCINLPTVLPGsPSK (T) S(0.0)CINLPT(0.0)VLPGS(0.99)PS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TK1 29392.6 15 2 2787.1 70.63 HUMAN 1 1.8035 -36.3454 LPVDFERSFQEEKPL-p A0A087WZY3;S2805-p LPVDFERSFQEEKPL 0.58471981560589 0.00643036349952778 0.0806666666666667 -0.600666666666667 4.28744761789599 31.5191344407078 0.0806666666666667 -0.600666666666667 0.372610628051878 0.000704833529978301 0.971691955531324 -6.8963073368509 A0A087WZY3 NotFound A0A087WZY3.S2805.p_NotFound A0A087WZY3_S2805s _1_1_2805_2805 A0A087WZY3 A0A087WZY3|Q8TCU4|A0A087WTU9|Q8TCU4-2|A0A087WV20|Q8TCU4-3 Alstrom syndrome protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18240.18240.5 12.17 12.17 12.165 2 1 1 0 672.361 3277.8148 S2805s TMT10 2794 (R) QSQKLPVDFERsFQEEKPLER (S) QS(0.0)QKLPVDFERS(0.99)FQEEKPLER K:TMT10,s:Phosphorylated S ALMS1 463449.8 1 10 1397.1 146.67 HUMAN 1 4.2874 -31.5191 LPVDQGGSLVGRNGV-p Q14126;S680-p LPVDQGGSLVGRNGV 0.94478758147709 0.0413492692114141 -0.012 0.249666666666667 0.483216460693309 18.5481881200547 -0.012 0.249666666666667 0.894701888284605 0.0139695104855907 -0.138701363978043 3.57103379783679 Q14126 DSG2 Q14126.S680.p_DSG2 Q14126_S680s _1_1_680_680 Q14126 Q14126 Desmoglein-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35054.35054.5 20.66 20.66 5.359 4 1 1 0 999.5138 4913.57 S680s TMT10 643 (K) GFTPIPGTIEMLHPWNNEGAPPEDKVVPSFLPVDQGGsLVGR (N) GFT(0.0)PIPGT(0.0)IEMLHPWNNEGAPPEDKVVPS(0.0)FLPVDQGGS(0.99)LVGR K:TMT10,s:Phosphorylated S DSG2 123090.5 8 1 494.1 293.66 HUMAN 1 -0.4832 18.5482 LPVDRRKSQMEEVQD-p Q12929;S685-p LPVDRRKSQMEEVQD 0.419598745385739 0.478187560606256 -0.121 0.142666666666667 6.96413280136198 4.27349343496956 -0.121 0.142666666666667 0.201180887582216 0.373809777286941 -1.45473337762711 0.968887814730415 Q12929 EPS8 Q12929.S685.p_EPS8 Q12929_S685s _1_1_685_685 Q12929 Q12929|Q12929-2 Epidermal growth factor receptor kinase substrate 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13388.13388.4 16.74 16.74 99 1 1 1 0 609.8175 2356.2807 S685s TMT10 683 (R) RKsQMEEVQDELIHR (L) RKS(1.0)QMEEVQDELIHR K:TMT10,s:Phosphorylated S EPS8 92222.2 1 7 994.1 191.04 HUMAN 1 -6.9641 4.2735 LPVEAVYSVPGRGTV-p P49411;S267-p LPVEAVYSVPGRGTV 0.0870441623178627 0.152325027339802 0.345 0.265333333333333 22.5976095167802 10.7463556574421 0.345 0.265333333333333 0.00549843440410793 0.0842101487028975 4.45994171438718 2.11080355271473 P49411 TUFM P49411.S267.p_TUFM P49411_S267s _1_1_267_267 P49411 P49411 Elongation factor Tu, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31993.31993.3 19.57 16.89 5.429 2 1 1 0 889.8246 2587.49 S267s TMT10 253 (R) DLEKPFLLPVEAVYsVPGR (G) DLEKPFLLPVEAVY(0.0)S(0.99)VPGR K:TMT10,s:Phosphorylated S TUFM 49883 3 1 2716.1 72.95 HUMAN 1 22.5976 10.7464 LPVGKHIYLSTRIDG-p Q9UHQ9;Y84-p LPVGKHIYLSTRIDG 0.471273926485432 0.0156196949028499 0.102333333333333 0.380333333333333 6.02944529887131 24.9704437001163 0.102333333333333 0.380333333333333 0.249491336854258 0.00318387222248777 1.28980734220726 5.03002653343566 Q9UHQ9 CYB5R1 Q9UHQ9.Y84.p_CYB5R1 Q9UHQ9_Y84y _1_1_84_84 Q9UHQ9 Q9UHQ9 NADH-cytochrome b5 reductase 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11524.11567.2 16.41 16.41 5.028 3 1 1 0 599.813 1118.652 Y84y TMT10 82 (K) HIyLSTR (I) HIY(0.99)LS(0.0)T(0.0)R y:Phosphorylated Y CYB5R1 34265.4 2 1 219.1 16.41 HUMAN 1 6.0294 24.9704 LPVSICRSCETLEGP-p O94885;S821-p LPVSICRSCETLEGP 0.0658832214960698 0.00328132424303653 0.412333333333333 0.624666666666667 25.5002197392301 37.1855851455654 0.412333333333333 0.624666666666667 0.00281824033363681 0.000191179572194063 5.17159293368987 8.93473609765841 O94885 SASH1 O94885.S821.p_SASH1 O94885_S821s _1_1_821_821 O94885 O94885|A0A087WW74 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23526.23526.4 21.52 21.52 1.166 6 1 1 0 775.1219 3017.5022 S821s TMT10 813 (R) SLPVSICRsCETLEGPQTVDTWPR (S) S(0.0)LPVS(0.0)ICRS(0.99)CET(0.0)LEGPQT(0.0)VDT(0.0)WPR C:Carbamidomethylation,s:Phosphorylated S SASH1 137734.8 2 17 295.1 379.69 HUMAN 1 25.5002 37.1856 LPVSRLVSLIGSKTQ-p P25786-2;S116-p LPVSRLVSLIGSKTQ 0.610770564629011 0.168630983563158 -0.088 0.166666666666667 3.96694155198324 10.1691928443852 -0.088 0.166666666666667 0.401149120898768 0.0961791014912431 -0.910805174444829 2.01029247730648 P25786 PSMA1 P25786.2.S116.p_PSMA1 P25786-2_S116s _1_1_116_116 P25786-2 P25786-2|F5GX11 Isoform Long of Proteasome subunit alpha type-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26601.26601.2 11.37 3.68 2.619 2 1 1 0 677.9095 1274.8448 S116s TMT10 114 (R) LVsLIGSK (T) LVS(0.99)LIGS(0.0)K K:TMT10,s:Phosphorylated S PSMA1 30524.2 2 2 3397.1 52.07 HUMAN 1 -3.9669 10.1692 LPVSRPISPSPSAIL-p Q5T5P2;S361-p LPVSRPISPSPSAIL 0.971444785466597 0.0910630018690853 0.00566666666666665 0.220333333333333 0.245548801306813 13.7645532600372 0.00566666666666666 0.220333333333333 0.945028965203471 0.0420285758433238 0.0722096658428496 2.64823461836487 Q5T5P2 KIAA1217 Q5T5P2.S361.p_KIAA1217 Q5T5P2_S361s _1_1_361_361 Q5T5P2 Q5T5P2|Q5T5P2-3|Q5T5P2-10|Q5T5P2-7|Q5T5P2-2|Q5T5P2-9|Q5T5P2-6|Q5T5P2-8|Q5T5P2-4 Sickle tail protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24064.24064.4 17.17 17.17 1.146 6 1 1 0 604.5858 2335.3547 S361s TMT10 351 (R) ISSLPVSRPIsPSPSAILER (R) IS(0.0)S(0.0)LPVS(0.0)RPIS(0.99)PS(0.0)PS(0.0)AILER s:Phosphorylated S KIAA1217 214739.6 14 4 303.1 376.04 HUMAN 1 0.2455 13.7646 LPWDSDESPEASPGP-p Q9UMN6;S1035-p LPWDSDESPEASPGP 0.56673053697457 0.460673348005545 0.0823333333333333 -0.0936666666666666 4.54256180937004 4.48834842549033 0.0823333333333333 -0.0936666666666666 0.351353123767648 0.3557665869965 1.0195205677018 -1.00921384776132 Q9UMN6 KMT2B Q9UMN6.S1035.p_KMT2B Q9UMN6_S1032sS1035s_2_2_1032_1035 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28848.29057.3 18.82 18.82 4.928 4 2 2 0 865.386 2434.2088 S1032s S1035s TMT10 1026 (K) TLLPWDsDEsPEASPGPPGPR (R) T(0.0)LLPWDS(0.99)DES(0.99)PEAS(0.0)PGPPGPR s:Phosphorylated S KMT2B 297845.7 3 21 388.1 332.76 HUMAN 1 4.5426 -4.4883 LPWETWGSGGEGNSA-p P48382;S505-p LPWETWGSGGEGNSA 0.0752001385682646 0.644511025058764 0.467333333333333 -0.0523333333333333 24.0573022979669 2.60026979147425 0.467333333333333 -0.0523333333333333 0.00392888909968919 0.549506736459232 4.80891474656666 -0.637900737689532 P48382 RFX5 P48382.S505.p_RFX5 P48382_S505s _1_1_505_505 P48382 P48382|P48382-2 DNA-binding protein RFX5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24403.24403.4 20.28 20.3 1.155 3 1 1 0 863.9044 3372.6319 S505s TMT10 498 (R) LPWETWGsGGEGNSAGGAERPGPMGEAEK (G) LPWET(0.0)WGS(0.99)GGEGNS(0.0)AGGAERPGPMGEAEK K:TMT10,s:Phosphorylated S RFX5 65721.2 1 6 1365.1 149.8 HUMAN 1 24.0573 -2.6003 LPYLDKDSPQSADCN-p Q8NG31;S682-p LPYLDKDSPQSADCN 0.812891412800423 0.0169022103999246 0.0336666666666667 -0.583 1.73104165031043 24.4539236275059 0.0336666666666667 -0.583 0.67126783080053 0.00358597813553687 0.448379647365959 -4.90084530504284 Q8NG31 CASC5 Q8NG31.S682.p_CASC5 Q8NG31_S682s_1_1_682_682 Q8NG31 Q8NG31|Q8NG31-2 Kinetochore scaffold 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26813.26813.5 17.8 11.3 1.093 6 1 1 0 918.6631 4508.3045 S682s N697n TMT10 674 (K) ILPYLDKDsPQSADCNQEIATSHnIVYCGGVLDK (Q) ILPY(0.0)LDKDS(0.99)PQS(0.0)ADCN(0.50)QEIAT(0.0)S(0.0)HN(0.50)IVY(0.0)CGGVLDK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated KNL1 268353.4 1 5 650.1 254.2 HUMAN 1 1.731 -24.4539 LPYPTLASPASD___-p P0C1Z6;S249-p LPYPTLASPASD___ 0.407878856431238 0.0244830788055567 0.113666666666667 0.334 7.18537062997154 21.9370260722507 0.113666666666667 0.334 0.191189015558888 0.00640173058118576 1.49342394536158 4.30301010470331 P0C1Z6 TFPT P0C1Z6.S249.p_TFPT P0C1Z6_S249s _1_1_249_249 P0C1Z6 P0C1Z6|P0C1Z6-2 TCF3 fusion partner HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32713.32713.2 11.18 11.18 2.372 4 1 1 0 827.4222 1573.8675 S249s TMT10 241 (K) LLPYPTLAsPASD (-) LLPY(0.0)PT(0.0)LAS(0.99)PAS(0.0)D s:Phosphorylated S TFPT 28334.9 2 5 969.1 193.6 HUMAN 1 7.1854 21.937 LQAAKDPSAVAKHFV-p P06744-2;S248-p LQAAKDPSAVAKHFV 0.579965732613118 0.254689081131897 -0.0926666666666667 0.142333333333333 4.35155302877707 7.82436758281335 -0.0926666666666667 0.142333333333333 0.367150984529099 0.165030129977262 -0.983760593627552 1.60418083300319 P06744 GPI P06744.2.S248.p_GPI P06744-2_S248s _1_1_248_248 P06744-2 P06744-2|K7EQ48 Isoform 2 of Glucose-6-phosphate isomerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25424.25424.4 15.21 15.21 99 1 1 1 0 607.8372 2348.3581 S248s TMT10 238 (K) EWFLQAAKDPsAVAK (H) EWFLQAAKDPS(1.0)AVAK K:TMT10,s:Phosphorylated S GPI 64608.7 2 5 2374.1 86.23 HUMAN 1 -4.3516 7.8244 LQAAYGASAPSVTSA-p O43488;S287-p LQAAYGASAPSVTSA 0.215431595213222 0.00526062627901912 0.222333333333333 -0.583333333333333 12.8433709723901 33.1226487137581 0.222333333333333 -0.583333333333333 0.051959253480348 0.000487231242551056 2.4828811484682 -7.42798916471594 O43488 AKR7A2 O43488.S287.p_AKR7A2 O43488_S287s _1_1_287_287 O43488 O43488 Aflatoxin B1 aldehyde reductase member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20039.20039.3 19.87 19.87 4.621 5 1 1 0 705.367 2034.1181 S287s TMT10 279 (K) ALQAAYGAsAPSVTSAALR (W) ALQAAY(0.0)GAS(0.99)APS(0.0)VT(0.0)S(0.0)AALR s:Phosphorylated S AKR7A2 40044.7 1 3 3668.1 45.68 HUMAN 1 12.8434 -33.1226 LQADQLGSLKSNPYF-p Q8WUM0;S1133-p LQADQLGSLKSNPYF 0.192059131883792 0.993936068467872 -0.678 0.001 13.9886796423249 0.0370921259091251 -0.678 0.001 0.0399146233788332 0.991495591209576 -2.69084028366721 0.0111591154220264 Q8WUM0 NUP133 Q8WUM0.S1133.p_NUP133 Q8WUM0_S1133s _1_1_1133_1133 Q8WUM0 Q8WUM0 Nuclear pore complex protein Nup133 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25002.25002.3 15.38 13.86 99 1 1 1 0 613.6718 1759.0366 S1133s TMT10 1124 (K) DLLQADQLGsLK (S) DLLQADQLGS(1.0)LK K:TMT10,s:Phosphorylated S NUP133 130003.6 2 16 652.1 254.15 HUMAN 1 -13.9887 0.0371 LQAEADSTSEGLEDA-p Q27J81;T1148-p LQAEADSTSEGLEDA 0.617684437816445 0.290326216680453 0.074 -0.103 3.88353075987172 7.0881724585128 0.074 -0.103 0.408928071140964 0.195516202851683 0.894799929805092 -1.47602572652381 Q27J81 INF2 Q27J81.T1148.p_INF2 Q27J81_S1147sT1148t_2_2_1147_1148 Q27J81 Q27J81|Q27J81-2 Inverted formin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.28182.28182.4 19.15 18.19 1.711 6 2 2 0 965.2134 3697.8921 S1147s T1148t TMT10 1129 (R) QDAKDPTSLLGVLQAEADstSEGLEDAVHSR (G) QDAKDPT(0.0)S(0.0)LLGVLQAEADS(0.99)T(0.99)S(0.0)EGLEDAVHS(0.0)R K:TMT10,s:Phosphorylated S,t:Phosphorylated T INF2 136934.1 9 12 356.1 347.64 HUMAN 1 3.8835 -7.0882 LQAELEQSHPRLKEQ-p O95613;S2878-p LQAELEQSHPRLKEQ 0.540568630290251 0.317434563369966 -0.0866666666666667 -0.153 4.93134213928707 6.58711852489969 -0.0866666666666667 -0.153 0.321266754567307 0.219426030944906 -1.09146103506563 -1.38816764570186 O95613 PCNT O95613.S2878.p_PCNT O95613_S2878s _1_1_2878_2878 O95613 O95613 Pericentrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17956.17956.4 17.2 15.13 99 1 1 1 0 615.0732 2377.3029 S2878s TMT10 2866 (R) EKPAWLQAELEQsHPR (L) EKPAWLQAELEQS(1.0)HPR K:TMT10,s:Phosphorylated S PCNT 380826.2 1 16 222.1 428 HUMAN 1 -4.9313 -6.5871 LQAEPHNSLGKAARR-p Q6P2E9;S1380-p LQAEPHNSLGKAARR 0.438363146909406 0.341167016339534 -0.178666666666667 0.187333333333333 6.59549071045088 6.18585118612519 -0.178666666666667 0.187333333333333 0.219003436154289 0.240666078452128 -1.39000312720148 1.31728213236806 Q6P2E9 EDC4 Q6P2E9.S1380.p_EDC4 Q6P2E9_S1380s _1_1_1380_1380 Q6P2E9 Q6P2E9|Q6P2E9-2 Enhancer of mRNA-decapping protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28377.28377.3 18.21 18.21 99 1 1 1 0 756.4059 2187.2326 S1380s TMT10 1369 (K) LFQFLQAEPHNsLGK (A) LFQFLQAEPHNS(1.0)LGK K:TMT10,s:Phosphorylated S EDC4 153084.9 2 20 177.1 481.34 HUMAN 1 -6.5955 6.1859 LQAKAEKSPKSPNSV-p A0A0C4DFM7;S131-p LQAKAEKSPKSPNSV 0.905774300473971 0.812686925641696 0.0233333333333333 -0.024 0.844048414702998 1.26204039876116 0.0233333333333333 -0.024 0.823370226312216 0.747818078690896 0.234288751285519 -0.338341094524199 A0A0C4DFM7 ZCCHC11 A0A0C4DFM7.S131.p_ZCCHC11 A0A0C4DFM7_S131s _1_1_131_131 A0A0C4DFM7 A0A0C4DFM7 Terminal uridylyltransferase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7238.7238.4 8.74 3.62 8.738 3 1 1 0 567.8339 2188.3471 S131s TMT10 128 (K) AEKsPKSPNSVK (A) AEKS(0.99)PKS(0.0)PNS(0.0)VK K:TMT10,s:Phosphorylated S ZCCHC11 188216.3 3 3 850.1 212.61 HUMAN 1 0.844 -1.262 LQAQDYPSPNIMRTQ-p Q16825;S554-p LQAQDYPSPNIMRTQ 0.378389324662461 0.525724408939767 -0.132 0.0886666666666667 7.80127757631911 3.75095841348136 -0.132 0.0886666666666667 0.165909877388037 0.42160345250611 -1.6006675788618 0.86907474753905 Q16825 PTPN21 Q16825.S554.p_PTPN21 Q16825_S554s _1_1_554_554 Q16825 Q16825 Tyrosine-protein phosphatase non-receptor type 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25814.25814.4 10.67 10.67 3.718 4 1 1 0 865.7027 3379.7994 S554s TMT10 531 (R) RPVVGAVSVPELTNAQLQAQDYPsPNIMR (T) RPVVGAVS(0.0)VPELT(0.0)NAQLQAQDY(0.0)PS(0.99)PNIMR s:Phosphorylated S PTPN21 134191.5 1 3 762.1 229.75 HUMAN 1 -7.8013 3.751 LQARKENSMDTASQA-p Q9BRV8-2;S202-p LQARKENSMDTASQA 0.143862442048254 0.0125211291156626 0.282 0.669333333333333 17.1909092071964 26.5398855330096 0.282 0.669333333333333 0.0190945346749214 0.00221825488557059 3.30033108634843 5.43731802852517 Q9BRV8 SIKE1 Q9BRV8.2.S202.p_SIKE1 Q9BRV8-2_S202s _1_1_202_202 Q9BRV8-2 Q9BRV8-2 Isoform 2 of Suppressor of IKBKE 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10996.10996.3 12.82 12.82 1.22 3 1 1 0 730.718 2110.1781 S202s TMT10 199 (R) KENsMDTASQAIK (-) KENS(0.99)MDT(0.0)AS(0.0)QAIK K:TMT10,s:Phosphorylated S SIKE1 24431.4 1 2 4751.1 27.04 HUMAN 1 17.1909 26.5399 LQASKRNSFGSEWAQ-p Q5T0T0-2;S131-p LQASKRNSFGSEWAQ 0.617306864410826 0.00981248829298665 0.0773333333333333 0.461333333333333 3.88835509168687 28.2642577694477 0.0773333333333334 0.461333333333333 0.408474068280486 0.00149133160955459 0.89572754138212 5.91225246864372 Q5T0T0 MARCH8 Q5T0T0.2.S131.p_MARCH8 Q5T0T0-2_S131s _1_1_131_131 Q5T0T0-2 Q5T0T0-2 Isoform 2 of E3 ubiquitin-protein ligase MARCH8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20836.20836.3 9.38 5.82 1.137 2 1 1 0 853.1375 2477.4232 S131s TMT10 129 (K) RNsFGSEWAQALKPAK (N) RNS(0.99)FGS(0.0)EWAQALKPAK K:TMT10,s:Phosphorylated S MARCH8 64972.4 2 4 4048.1 38.63 HUMAN 1 3.8884 28.2643 LQASTLFSFKSLLQC-p Q5T292-2;S125-p LQASTLFSFKSLLQC 0.559676483538706 0.0577995192793928 0.086 0.273 4.65211627104267 16.4939560460552 0.086 0.273 0.342600800120735 0.022418388726304 1.03990262112484 3.16129923701923 Q5T292 C10orf128 Q5T292.2.S125.p_C10orf128 Q5T292-2_S125s _1_1_125_125 Q5T292-2 Q5T292-2 Isoform 2 of Putative uncharacterized protein C10orf128 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14572.14572.2 7.78 2.92 2.232 3 1 1 0 840.4603 1599.9511 S125s TMT10 118 (K) LQASTLFsFK (S) LQAS(0.0)T(0.0)LFS(0.99)FK K:TMT10,s:Phosphorylated S C10orf128 19028.3 2 1 7088.1 7.78 HUMAN 1 4.6521 16.494 LQATNAVSPLKEQIM-p Q9Y2Z9;S456-p LQATNAVSPLKEQIM 0.510291527209637 0.501965782745297 -0.0913333333333333 0.082 5.39866005062247 4.00782575693493 -0.0913333333333333 0.082 0.288492146433939 0.397390448423313 -1.1766388992525 0.918469422106977 Q9Y2Z9 COQ6 Q9Y2Z9.S456.p_COQ6 Q9Y2Z9_S456s _1_1_456_456 Q9Y2Z9 Q9Y2Z9|Q9Y2Z9-3|A0A0D9SFJ1 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23667.23667.3 7.23 7.23 2.591 3 1 1 0 675.3717 1944.1319 S456s TMT10 446 (R) TWGLQATNAVsPLK (E) T(0.0)WGLQAT(0.0)NAVS(0.99)PLK K:TMT10,s:Phosphorylated S COQ6 51154.3 1 1 7219.1 7.23 HUMAN 1 -5.3987 4.0078 LQAVLARSPNVFREK-p Q6KC79;S103-p LQAVLARSPNVFREK 0.44074595414421 0.008364141432882 -0.210333333333333 0.452 6.55459782946022 29.5339247453984 -0.210333333333333 0.452 0.221075296959572 0.00111328799378486 -1.38279978822234 6.28180903102243 Q6KC79 NIPBL Q6KC79.S103.p_NIPBL Q6KC79_S103s _1_1_103_103 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37427.37427.4 23.32 23.32 8.072 2 1 1 0 829.9257 3236.7113 S103s TMT10 81 (K) DNLGSDDPEGDIPVLLQAVLARsPNVFR (E) DNLGS(0.0)DDPEGDIPVLLQAVLARS(0.99)PNVFR s:Phosphorylated S NIPBL 318099.5 3 1 50.1 752.87 HUMAN 1 -6.5546 29.5339 LQCVAVGSPIPHYQW-p Q9UDY8;S253-p LQCVAVGSPIPHYQW 0.151296449522462 0.09050158186633 -0.426333333333333 -0.220666666666667 16.5171262192664 13.8036366910161 -0.426333333333333 -0.220666666666667 0.022299102205749 0.0416520451895519 -3.16812446398274 -2.65537026712012 Q9UDY8 MALT1 Q9UDY8.S253.p_MALT1 Q9UDY8_S253s _1_1_253_253 Q9UDY8 Q9UDY8|Q9UDY8-2 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.35362.35362.5 25.69 25.69 4.753 4 1 1 0 674.1566 3286.7885 S253s TMT10 238 (K) LMPGSTLVLQCVAVGsPIPHYQWFK (N) LMPGS(0.0)T(0.0)LVLQCVAVGS(0.99)PIPHY(0.0)QWFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MALT1 93811.2 2 2 3959.1 40.27 HUMAN 1 -16.5171 -13.8036 LQDILTNSKSRSGLE-p Q4V328;S639-p LQDILTNSKSRSGLE 0.313090684136909 0.199087515118742 -0.241333333333333 -0.189333333333333 9.43551570683805 9.22397912645168 -0.241333333333333 -0.189333333333333 0.113880254572722 0.119564454661519 -1.88378375526512 -1.84645948902794 Q4V328 GRIPAP1 Q4V328.S639.p_GRIPAP1 Q4V328_S639s _1_1_639_639 Q4V328 Q4V328|Q4V328-4|A0A075B793|A0A087WT45|Q4V328-2|Q4V328-3 GRIP1-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22697.22697.3 9.66 5.64 1.547 2 1 1 0 523.9611 1489.899 S639s TMT10 632 (R) LQDILTNsK (S) LQDILT(0.0)NS(0.99)K K:TMT10,s:Phosphorylated S GRIPAP1 96330.2 1 3 1542.1 132.91 HUMAN 1 -9.4355 -9.224 LQDKLNESDEQHQEN-p Q15545;S264-p LQDKLNESDEQHQEN 0.885585284476882 0.945758152567333 -0.0276666666666667 -0.00933333333333332 1.04059948180613 0.349197637933964 -0.0276666666666667 -0.00933333333333334 0.786937156707881 0.922741888611448 -0.284031602699358 -0.101578648725751 Q15545 TAF7 Q15545.S264.p_TAF7 Q15545_S264s_1_1_264_264 Q15545 Q15545 Transcription initiation factor TFIID subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21882.21882.4 17.16 17.16 3.434 2 1 1 0 944.4586 3711.8648 Q256q S264s Hydrogen 256 (R) qLQDKLNEsDEQHQENEGTNQLVMGIQK (Q) Q(1.0)LQDKLNES(0.99)DEQHQENEGT(0.0)NQLVMGIQK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S TAF7 40372.5 17 5 1709.1 120.05 HUMAN 1 -1.0406 -0.3492 LQDLDCSSSDDEGAA-p P08240;S297-p LQDLDCSSSDDEGAA 0.936107507392066 0.246102119630895 0.0123333333333333 -0.168666666666667 0.560384180505396 8.02353505021457 0.0123333333333333 -0.168666666666667 0.878944761208254 0.157632765543264 0.159652824087857 -1.63872205932986 P08240 SRPR P08240.S297.p_SRPR P08240_S296sS297sS298s_3_3_296_298 P08240 P08240|P08240-2 Signal recognition particle receptor subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14386.15007.4 27.22 27.22 11.98 9 3 3 0 1024.9476 3856.871 S296s S297s S298s TMT10 283 (R) GTGSGGQLQDLDCsssDDEGAAQNSTKPSATK (G) GT(0.0)GS(0.0)GGQLQDLDCS(0.99)S(0.99)S(0.99)DDEGAAQNS(0.0)T(0.0)KPS(0.0)AT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SRPRA 70266.4 20 11 1857.1 110.87 HUMAN 1 0.5604 -8.0235 LQDLVNRTPWKKCCF-p Q15291;T252-p LQDLVNRTPWKKCCF 0.953225183275633 0.524557029173369 -0.00900000000000001 0.0636666666666667 0.410577932799889 3.76557376379554 -0.00900000000000002 0.0636666666666667 0.909792194939797 0.420187011424904 -0.118703847090003 0.871903499582668 Q15291 RBBP5 Q15291.T252.p_RBBP5 Q15291_T252t _1_1_252_252 Q15291 Q15291|Q15291-2 Retinoblastoma-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19748.19748.4 9.61 9.61 99 1 1 1 0 567.0823 2185.3424 T252t TMT10 245 (K) LQDLVNRtPWKK (C) LQDLVNRT(1.0)PWKK K:TMT10,t:Phosphorylated T RBBP5 59836.2 2 2 1667.1 122.41 HUMAN 1 -0.4106 3.7656 LQDQRQNSPAGNKEN-p Q99700;S758-p LQDQRQNSPAGNKEN 0.544717956557874 0.0148233079205259 -0.132666666666667 -0.558 4.87191678572383 25.3217975490601 -0.132666666666667 -0.558 0.325692922677267 0.00293643400752551 -1.08053307514514 -5.11924570516343 Q99700 ATXN2 Q99700.S758.p_ATXN2 Q99700_S758s_1_1_758_758 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5844.5844.3 13.9 12.75 13.901 1 1 1 0 665.6738 1914.0557 N757n S758s TMT10 751 (R) LQDQRQnsPAGNK (E) LQDQRQN(0.99)S(1.0)PAGN(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S ATXN2 140907.9 7 17 176.1 481.52 HUMAN 1 -4.8719 -25.3218 LQEAGILSAEELQRL-p Q15149;S2802-p LQEAGILSAEELQRL 0.92935232247217 0.278071493111692 -0.0173333333333333 0.176 0.630988835986898 7.32404962502691 -0.0173333333333333 0.176 0.86477099846549 0.185180408372104 -0.178569524637297 1.51718681140715 Q15149 PLEC Q15149.S2802.p_PLEC Q15149_S2802s _1_1_2802_2802 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21847.21847.3 14.3 13.16 99 1 1 1 0 622.6572 1785.9908 S2802s TMT10 2795 (R) LQEAGILsAEELQR (L) LQEAGILS(1.0)AEELQR s:Phosphorylated S PLEC 533778 1 21 44.1 794.85 HUMAN 1 -0.631 7.324 LQEDPNYSPQRFPNA-p P46379-3;S1147-p LQEDPNYSPQRFPNA 0.796323249979386 0.0647830590215447 0.0386666666666667 -0.248666666666667 1.90888798303559 15.8171309444385 0.0386666666666667 -0.248666666666667 0.644334227055597 0.0261991321539197 0.488528736061574 -3.03104426953115 P46379 BAG6 P46379.3.S1147.p_BAG6 P46379-3_S1147s _1_1_1147_1147 P46379-3 P46379-3|A0A0G2JK23|P46379-2|A0A024RCR6|P46379-5|A0A0G2JL47|P46379-4 Isoform 3 of Large proline-rich protein BAG6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9113.9113.5 18.47 18.47 3.002 2 1 1 0 505.8516 2445.2585 S1147s TMT10 1139 (K) RLQEDPNYsPQRFPNAQR (A) RLQEDPNY(0.0)S(0.99)PQRFPNAQR s:Phosphorylated S BAG6 122796.4 9 10 590.1 264.42 HUMAN 1 1.9089 -15.8171 LQEEEKHSSEEEDEK-p R4GMW8;S610-p LQEEEKHSSEEEDEK 0.205489455095731 0.00479654424040192 -0.358 0.695666666666667 13.2866541461536 33.8932635146083 -0.358 0.695666666666667 0.0469174700445355 0.000408012669165655 -2.56285106315847 7.69553806536863 R4GMW8 NotFound R4GMW8.S610.p_NotFound R4GMW8_S610sS611s_2_2_610_611 R4GMW8 R4GMW8|A0A1W2PS85|P28715|P28715-3 BIVM-ERCC5 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20347.20347.5 18.81 12.01 18.267 3 2 2 0 778.7759 3729.9062 S610s S611s TMT10 593 (R) RENDLYVLPPLQEEEKHssEEEDEK (E) RENDLY(0.0)VLPPLQEEEKHS(0.99)S(0.99)EEEDEK K:TMT10,s:Phosphorylated S BIVM-ERCC5 185876.1 9 14 561.1 271.77 HUMAN 1 -13.2867 33.8933 LQEEGGGSDEEETGS-p Q13610;S50-p LQEEGGGSDEEETGS 0.713870565238222 0.788091367540952 -0.0496666666666667 -0.028 2.75885572976834 1.43615869469565 -0.0496666666666667 -0.028 0.529803016920565 0.718429456322966 -0.670992642239081 -0.379929045856371 Q13610 PWP1 Q13610.S50.p_PWP1 Q13610_S50s _1_1_50_50 Q13610 Q13610|Q13610-2 Periodic tryptophan protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10258.10865.3 25.79 25.79 1.177 5 1 1 0 964.3973 2811.206 S50s TMT10 43 (K) LQEEGGGsDEEETGSPSEDGMQSAR (T) LQEEGGGS(0.99)DEEET(0.0)GS(0.0)PS(0.0)EDGMQS(0.0)AR s:Phosphorylated S PWP1 56397.4 13 1 2267.1 90.54 HUMAN 1 -2.7589 -1.4362 LQEEIVNSVKGCGNC-p O75027-2;S744-p LQEEIVNSVKGCGNC 0.716372991003982 0.0824846851295459 0.0773333333333333 0.359 2.73163192034583 14.3542578573468 0.0773333333333333 0.359 0.533134525324279 0.0366922390492606 0.66535593358213 2.75649153137962 O75027 ABCB7 O75027.2.S744.p_ABCB7 O75027-2_S744s _1_1_744_744 O75027-2 O75027-2 Isoform 2 of ATP-binding cassette sub-family B member 7, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15540.15540.3 9.49 7.02 99 1 1 1 0 685.3994 1974.2202 S744s TMT10 736 (K) KLQEEIVNsVK (G) KLQEEIVNS(1.0)VK K:TMT10,s:Phosphorylated S ABCB7 83053.2 1 1 6786.1 9.49 HUMAN 1 2.7316 14.3543 LQEFAGPSGKLSLLE-p Q9H8H3;S69-p LQEFAGPSGKLSLLE 0.133129641422699 0.0926332221057354 -0.324 0.268 18.0442190404652 13.6652796303511 -0.324 0.268 0.015688379848081 0.0430003545985716 -3.47121989051236 2.63013393140553 Q9H8H3 METTL7A Q9H8H3.S69.p_METTL7A Q9H8H3_S69s _1_1_69_69 Q9H8H3 Q9H8H3 Methyltransferase-like protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28656.28656.3 20.01 20.01 12.205 2 1 1 0 721.3691 2082.1272 S69s TMT10 57 (R) ELFSNLQEFAGPsGK (L) ELFS(0.0)NLQEFAGPS(0.99)GK K:TMT10,s:Phosphorylated S METTL7A 28832.1 1 1 4636.1 28.57 HUMAN 1 -18.0442 13.6653 LQEHGSDSFLAEHKL-p Q00688;S36-p LQEHGSDSFLAEHKL 0.453197114809605 0.0257079144253812 -0.136 0.399333333333333 6.33997837550367 21.6267255372755 -0.136 0.399333333333333 0.232274836181337 0.00687586666342122 -1.34490966787417 4.2327105853743 Q00688 FKBP3 Q00688.S36.p_FKBP3 Q00688_S36s _1_1_36_36 Q00688 Q00688 Peptidyl-prolyl cis-trans isomerase FKBP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17667.18097.3 16.93 16.93 1.283 2 1 1 0 761.7116 2203.1548 S36s TMT10 28 (K) FLQEHGSDsFLAEHK (L) FLQEHGS(0.0)DS(0.99)FLAEHK K:TMT10,s:Phosphorylated S FKBP3 25233.4 2 3 1207.1 166.76 HUMAN 1 -6.34 21.6267 LQEIEEPSLEPENEK-p Q15424;S209-p LQEIEEPSLEPENEK 0.281543097513104 0.00877271228538377 -0.189 0.571333333333333 10.4076357556228 29.1607146990154 -0.189 0.571333333333334 0.0910408752794492 0.00121318918491532 -2.05262835255021 6.1713545821915 Q15424 SAFB Q15424.S209.p_SAFB Q15424_S209s _1_1_209_209 Q15424 Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.33213.33213.4 21.22 16.13 1.715 7 1 1 0 990.7368 3879.9275 S209s TMT10 187 (K) ETINNLDTSSSDFTILQEIEEPsLEPENEK (I) ET(0.0)INNLDT(0.0)S(0.0)S(0.0)S(0.0)DFT(0.0)ILQEIEEPS(0.99)LEPENEK K:TMT10,s:Phosphorylated S SAFB 103096.3 1 19 83.1 629.62 HUMAN 1 -10.4076 29.1607 LQEKASESDAEIKDM-p Q5M775;S654-p LQEKASESDAEIKDM 0.182356635635771 0.00964250777774905 0.585666666666667 -0.777333333333333 14.5383185069809 28.4145125099262 0.585666666666667 -0.777333333333333 0.0351696583377311 0.00144061770869029 2.79230253755715 -5.95507991756061 Q5M775 SPECC1 Q5M775.S654.p_SPECC1 Q5M775_S654s _1_1_654_654 Q5M775 Q5M775|Q5M775-4|Q5M775-2|Q5M775-3|Q5M775-5|J3QQM0 Cytospin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9988.9988.3 12.25 4.38 2.154 2 1 1 0 496.5852 1407.7731 S654s TMT10 651 (K) ASEsDAEIK (D) AS(0.0)ES(0.99)DAEIK K:TMT10,s:Phosphorylated S SPECC1 119267.5 3 17 330.1 358.68 HUMAN 1 14.5383 -28.4145 LQEKGKLSAEENPDD-p Q9Y5Q9;S43-p LQEKGKLSAEENPDD 0.967385376512077 0.0931938930148311 0.00633333333333333 0.188666666666667 0.280177468569662 13.6313957637295 0.00633333333333333 0.188666666666667 0.937523695504549 0.0433371576240261 0.0820932280841538 2.62396371269143 Q9Y5Q9 GTF3C3 Q9Y5Q9.S43.p_GTF3C3 Q9Y5Q9_S43s _1_1_43_43 Q9Y5Q9 Q9Y5Q9|Q9Y5Q9-2 General transcription factor 3C polypeptide 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13788.13788.3 22.93 17.98 2.812 7 1 1 0 1072.5371 3135.626 S43s TMT10 40 (K) GKLsAEENPDDSEVPSSSGINSTK (S) GKLS(0.99)AEENPDDS(0.0)EVPS(0.0)S(0.0)S(0.0)GINS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S GTF3C3 102069.2 6 2 2873.1 67.61 HUMAN 1 0.2802 13.6314 LQELKAPSF______-p Q96PL5;S474-p LQELKAPSF______ 0.0613809554565416 0.00840448513471 -0.430333333333333 -0.443 26.4126995083238 29.4880493707252 -0.430333333333333 -0.443 0.00228417855143534 0.001125110202607 -5.41070023355781 -6.2681482329752 Q96PL5 ERMAP Q96PL5.S474.p_ERMAP Q96PL5_S474s _1_1_474_474 Q96PL5 Q96PL5|X6R4N5 Erythroid membrane-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.37178.37178.3 20.97 20.97 8.522 2 1 1 0 958.199 2792.6214 S474s TMT10 454 (K) DIILSLPPDLGPALQELKAPsF (-) DIILS(0.0)LPPDLGPALQELKAPS(0.99)F K:TMT10,s:Phosphorylated S ERMAP 53231.4 2 1 5286.1 20.97 HUMAN 1 -26.4127 -29.488 LQELLGPSPQRDPQA-p O14978;S178-p LQELLGPSPQRDPQA 0.406061732958111 0.0303766275012227 -0.125666666666667 -0.294333333333333 7.22630982422149 20.5166507451684 -0.125666666666667 -0.294333333333333 0.18939522156822 0.00887840445690146 -1.50057230013124 -3.98686267581541 O14978 ZNF263 O14978.S178.p_ZNF263 O14978_S178s _1_1_178_178 O14978 O14978 Zinc finger protein 263 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21598.21598.3 16.6 13.75 99 1 1 1 0 805.4438 2334.3546 S178s TMT10 171 (R) LQELLGPsPQRDPQAVK (E) LQELLGPS(1.0)PQRDPQAVK K:TMT10,s:Phosphorylated S ZNF263 78894.9 2 20 240.11 415.72 HUMAN 1 -7.2263 -20.5167 LQELRALSMPDLDKL-p O15018;S2489-p LQELRALSMPDLDKL 0.478558986029447 0.0422585441911256 -0.185333333333333 -0.254666666666667 5.88947093913245 18.4058381813968 -0.185333333333333 -0.254666666666667 0.257663502553863 0.014434979846051 -1.26484863981934 -3.54188741430434 O15018 PDZD2 O15018.S2489.p_PDZD2 O15018_S2489s _1_1_2489_2489 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.33016.33016.4 18.05 15.12 2.246 5 1 1 0 871.1966 3401.794 S2489s TMT10 2487 (R) ALsMPDLDKLCSEDYSAGPSAVLFK (T) ALS(0.99)MPDLDKLCS(0.0)EDY(0.0)S(0.0)AGPS(0.0)AVLFK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PDZD2 304146 3 35 85.1 628.64 HUMAN 1 -5.8895 -18.4058 LQELSMGSPGPVTNK-p A0A1B0GV70;S401-p LQELSMGSPGPVTNK 0.2717882735848 0.00844746286847116 -0.202666666666667 -0.475 10.7213536974829 29.4319639542975 -0.202666666666667 -0.475 0.0846963374199636 0.00113973426358082 -2.10736139294214 -6.25147906826606 A0A1B0GV70 NotFound A0A1B0GV70.S401.p_NotFound A0A1B0GV70_S401s_1_1_401_401 A0A1B0GV70 A0A1B0GV70|Q96N21|Q96N21-2 AP-4 complex accessory subunit Tepsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20483.20483.3 15.32 15.32 2.514 4 1 1 0 884.7946 2556.4009 M399m S401s TMT10 390 (R) TRPWLQELSmGsPGPVTNK (A) T(0.0)RPWLQELS(0.0)M(1.0)GS(0.99)PGPVT(0.0)NK K:TMT10,m:Oxidized methionine,s:Phosphorylated S TEPSIN 62782.6 4 3 2632.1 75.83 HUMAN 1 -10.7214 -29.432 LQENGCLSDSDMFSQ-p P42704;S502-p LQENGCLSDSDMFSQ 0.294929222562145 0.266530722895301 0.229333333333333 0.128 10.0031536013953 7.56084020750744 0.229333333333333 0.128 0.0999274120022219 0.175354122029706 1.98225834774723 1.55840563897175 P42704 LRPPRC P42704.S502.p_LRPPRC P42704_S502s _1_1_502_502 P42704 P42704|A0A0C4DG06 Leucine-rich PPR motif-containing protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26149.26149.3 23.97 23.97 2.538 3 1 1 0 874.4066 2541.2275 S502s TMT10 493 (R) AILQENGCLsDSDMFSQAGLR (S) AILQENGCLS(0.99)DS(0.0)DMFS(0.0)QAGLR C:Carbamidomethylation,s:Phosphorylated S LRPPRC 159100.3 1 4 2473.1 81.91 HUMAN 1 10.0032 7.5608 LQENVEDSTDEDAPL-p Q7Z4S6-5;S1099-p LQENVEDSTDEDAPL 0.878091735475467 0.998780267598658 -0.0246666666666667 0.000166666666666685 1.11098574210467 0.00765068890920756 -0.0246666666666667 0.000166666666666688 0.774286033890671 0.998239914546979 -0.301490924136997 0.00230945325936984 Q7Z4S6 KIF21A Q7Z4S6.5.S1099.p_KIF21A Q7Z4S6-5_S1099sT1100t_2_2_1099_1100 Q7Z4S6-5 Q7Z4S6-5 Isoform 5 of Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32348.32348.5 29.96 29.96 3.243 8 2 2 0 1166.7584 5653.8158 S1099s T1100t M1121m TMT10 1076 (K) EKAELNPELDALLGHALQENVEDstDEDAPLNSPGSEGSTLSSDLmK (L) EKAELNPELDALLGHALQENVEDS(0.99)T(0.99)DEDAPLNS(0.0)PGS(0.0)EGS(0.0)T(0.0)LS(0.0)S(0.0)DLM(1.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T,m:Oxidized methionine KIF21A 184163.5 13 24 390.1 332.37 HUMAN 2 -1.111 0.0077 LQEREILSPLFPRNG-p Q5VWN6;S675-p LQEREILSPLFPRNG 0.708046873229158 0.00332073259880672 -0.076 -0.654333333333333 2.81890351733944 37.1213468407419 -0.076 -0.654333333333333 0.522528097347399 0.000194028406039562 -0.683383255840143 -8.90897303090632 Q5VWN6 FAM208B Q5VWN6.S675.p_FAM208B Q5VWN6_S675s _1_1_675_675 Q5VWN6 Q5VWN6 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29443.29443.2 12.41 12.41 99 1 1 1 0 690.879 1300.7826 S675s TMT10 672 (R) EILsPLFPR (N) EILS(1.0)PLFPR s:Phosphorylated S FAM208B 271861.7 1 6 275.1 391.61 HUMAN 1 -2.8189 -37.1213 LQESAIHSPGTVEKE-p F5H7W8;S210-p LQESAIHSPGTVEKE 0.440440669278541 0.482884442961378 0.107333333333333 0.081 6.55987542562436 4.21910279315412 0.107333333333333 0.081 0.220806806901958 0.378520775061935 1.38372972238026 0.958617417589451 F5H7W8 C12orf43 F5H7W8.S210.p_C12orf43 F5H7W8_S210s _1_1_210_210 F5H7W8 F5H7W8|Q96C57|G5EA44|E7ENF1 Chromosome 12 open reading frame 43, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21302.21302.3 24.71 24.71 3.715 5 1 1 0 959.8254 2797.4984 S210s TMT10 194 (R) EAAVSASDILQESAIHsPGTVEK (E) EAAVS(0.0)AS(0.0)DILQES(0.0)AIHS(0.99)PGT(0.0)VEK K:TMT10,s:Phosphorylated S C12orf43 31921.4 7 5 1296.1 156.8 HUMAN 1 6.5599 4.2191 LQESQAGSDTDVEEG-p Q14676;S376-p LQESQAGSDTDVEEG 0.699562238894903 0.0386311749996626 -0.058 0.338 2.91612203485472 18.9798862946909 -0.058 0.338 0.510961051070332 0.0126476946074471 -0.703323633136244 3.66015813266923 Q14676 MDC1 Q14676.S376.p_MDC1 Q14676_S376s _1_1_376_376 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14676.14676.3 22.35 22.35 1.202 3 1 1 0 996.8185 2908.4689 S376s TMT10 360 (R) GPGAPGLAHLQESQAGsDTDVEEGK (A) GPGAPGLAHLQES(0.0)QAGS(0.99)DT(0.0)DVEEGK K:TMT10,s:Phosphorylated S MDC1 227803.2 11 11 6.1 1662.62 HUMAN 1 -2.9161 18.9799 LQESRRLSAQFENLM-p Q9H7C4;S325-p LQESRRLSAQFENLM 0.340652587960436 0.645414619282595 0.351 -0.1 8.69822166403096 2.5928415111016 0.351 -0.1 0.134951536495813 0.550447430653938 1.75612452708226 -0.636344405123807 Q9H7C4 SYNC Q9H7C4.S325.p_SYNC Q9H7C4_S325s _1_1_325_325 Q9H7C4 Q9H7C4|Q9H7C4-2 Syncoilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21986.21986.3 11.02 11.02 11.02 2 1 1 0 654.3229 1880.985 S325s TMT10 323 (R) RLsAQFENLMAESR (Q) RLS(0.99)AQFENLMAES(0.0)R s:Phosphorylated S SYNC 55526.6 1 2 5514.1 18.63 HUMAN 1 8.6982 -2.5928 LQEWAPYSPGHSSRH-p Q8TDM6;S1156-p LQEWAPYSPGHSSRH 0.786868911295895 0.843805929805295 0.0473333333333333 -0.0223333333333333 2.0106679047848 1.03597820519114 0.0473333333333333 -0.0223333333333333 0.629409378066879 0.787774972977353 0.511163230139596 -0.2828509950927 Q8TDM6 DLG5 Q8TDM6.S1156.p_DLG5 Q8TDM6_S1156s _1_1_1156_1156 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22670.22670.3 21.61 21.61 2.962 6 1 1 0 1017.4697 2970.4253 S1156s TMT10 1138 (K) CVPASGELSPELQEWAPYsPGHSSR (H) CVPAS(0.0)GELS(0.0)PELQEWAPY(0.0)S(0.99)PGHS(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S DLG5 215575.4 3 27 34.1 890.58 HUMAN 1 2.0107 -1.036 LQFPTSNSLLSMLQS-p E9PG19;S556-p LQFPTSNSLLSMLQS 0.807399255272832 0.493968079574655 0.0373333333333333 0.074 1.78508454947334 4.09542202266639 0.0373333333333333 0.074 0.662966440758106 0.389455460799111 0.460663333848232 0.935165029743416 E9PG19 NotFound E9PG19.S556.p_NotFound E9PG19_S556s _1_1_556_556 E9PG19 E9PG19|O94868|O94868-2|E7ENZ2|O94868-3 F-BAR and double SH3 domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.37909.37909.3 21.08 21.08 2.178 7 1 1 0 955.4887 2784.4803 S556s TMT10 548 (K) YLQFPTSNsLLSMLQSLAALDSR (S) Y(0.0)LQFPT(0.0)S(0.0)NS(0.99)LLS(0.0)MLQS(0.0)LAALDS(0.0)R s:Phosphorylated S FCHSD2 87326.4 2 1 4162.1 36.41 HUMAN 1 1.7851 4.0954 LQGATQRSQMANSSR-p Q8N9B8-2;S375-p LQGATQRSQMANSSR 0.327394528659194 0.620749587807368 -0.361666666666667 -0.048 9.07437851863558 2.81587292696001 -0.361666666666667 -0.048 0.123754827212101 0.522892854750882 -1.82123907419286 -0.682666791047228 Q8N9B8 RASGEF1A Q8N9B8.2.S375.p_RASGEF1A Q8N9B8-2_S375sS380sS381s_3_3_375_381 Q8N9B8-2 Q8N9B8-2 Isoform 2 of Ras-GEF domain-containing family member 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28559.28559.4 10.11 2.48 0 3 3 3 0 834.6858 3094.8054 S375s S380s S381s N391n TMT10 375 (R) sQMANssREKIVIPVFnLFVK (D) S(1.0)QMAN(0.50)S(1.0)S(1.0)REKIVIPVFN(0.50)LFVK K:TMT10,s:Phosphorylated S,n:Deamidated RASGEF1A 56158.6 1 1 6691.1 10.11 HUMAN 1 -9.0744 -2.8159 LQGDLAVSGDIKCPK-p Q09666;S5377-p LQGDLAVSGDIKCPK 0.869683037439442 0.142505253157202 0.0236666666666666 0.187 1.18445108829119 11.1493698621502 0.0236666666666667 0.187 0.761298354636049 0.076747283744948 0.319526876112649 2.1812997078416 Q09666 AHNAK Q09666.S5377.p_AHNAK Q09666_S5377s _1_1_5377_5377 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20822.20822.3 14.68 10.86 13.468 2 1 1 0 665.6897 1915.0901 S5377s TMT10 5367 (R) GPSLQGDLAVsGDIK (C) GPS(0.0)LQGDLAVS(0.99)GDIK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 133 1.1 4313.36 HUMAN 1 1.1845 11.1494 LQGGSAGSPARFTID-p P21333-2;S1084-p LQGGSAGSPARFTID 0.886476244074489 0.945882769785327 -0.0226666666666667 -0.00766666666666665 1.02120908676717 0.346074010421167 -0.0226666666666667 -0.00766666666666666 0.790458531719051 0.923405801890391 -0.279190074859165 -0.100702223608813 P21333 FLNA P21333.2.S1084.p_FLNA P21333-2_S1084s _1_1_1084_1084 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54|A0A087WWY3 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14245.14245.2 17.02 13.19 2.169 2 1 1 0 869.9273 1658.8812 S1084s TMT10 1072 (K) AFGPGLQGGSAGsPAR (F) AFGPGLQGGS(0.0)AGS(0.99)PAR s:Phosphorylated S FLNA 282751.6 7 6 198.1 454.47 HUMAN 1 -1.0212 -0.3461 LQGGSQRSIAPRTHP-p P22415;S177-p LQGGSQRSIAPRTHP 0.00874686268802314 0.00137406073843988 -1.33933333333333 -1.34366666666667 50.5460290446155 46.4571738139957 -1.33933333333333 -1.34366666666667 8.81854825159898e-06 2.26090658419379e-05 -16.1177897303942 -13.4551981503635 P22415 USF1 P22415.S177.p_USF1 P22415_S177s _1_1_177_177 P22415 P22415|B1AQP1 Upstream stimulatory factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32007.32007.3 7.71 0.61 7.707 4 1 1 0 631.3425 1812.0532 S177s TMT10 177 (R) sIAPRTHPYSPK (S) S(0.99)IAPRT(0.0)HPY(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S USF1 33651.6 1 1 3527.1 49 HUMAN 1 -50.546 -46.4572 LQGLIDDYKTLHGNA-p Q8IXZ2;Y21-p LQGLIDDYKTLHGNA 0.563005808318766 0.12785333160694 0.265 0.966 4.59531226516249 11.7773946979902 0.265 0.966 0.347111317092874 0.0664141364650141 1.0293458075193 2.29179311974701 Q8IXZ2 ZC3H3 Q8IXZ2.Y21.p_ZC3H3 Q8IXZ2_Y21yT23t_2_2_21_23 Q8IXZ2 Q8IXZ2 Zinc finger CCCH domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29086.29086.5 12.31 4.13 12.31 9 2 2 0 1151.1851 5590.9613 Y21y T23t N27n TMT10 10 (R) QIRLLQGLIDDyKtLHGnAPAPGTPAASGWQPPTYHSGRAFSARYPR (P) QIRLLQGLIDDY(0.99)KT(0.99)LHGN(1.0)APAPGT(0.0)PAAS(0.0)GWQPPT(0.0)Y(0.0)HS(0.0)GRAFS(0.0)ARY(0.0)PR K:TMT10,y:Phosphorylated Y,t:Phosphorylated T,n:Deamidated ZC3H3 103422.9 1 6 2382.1 85.66 HUMAN 1 4.5953 11.7774 LQGLKVASEAPLEHK-p Q8TD19;S855-p LQGLKVASEAPLEHK 0.16231174209459 0.509902549269297 -0.369 -0.0973333333333333 15.8149633351923 3.92101472153303 -0.369 -0.0973333333333333 0.026212211678974 0.4054138001494 -3.03274137960565 -0.901850542573624 Q8TD19 NEK9 Q8TD19.S855.p_NEK9 Q8TD19_S855s _1_1_855_855 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12140.12140.4 18.18 18.18 18.175 3 1 1 0 643.344 2490.3717 S855s TMT10 853 (K) VAsEAPLEHKPQVEASSPR (L) VAS(0.99)EAPLEHKPQVEAS(0.0)S(0.0)PR K:TMT10,s:Phosphorylated S NEK9 108935.2 1 13 224.1 425.83 HUMAN 1 -15.815 -3.921 LQGNTQVSRKKLLPL-p Q86TP1;S347-p LQGNTQVSRKKLLPL 0.979213683234262 0.830174514611827 0.011 -0.034 0.179298023316826 1.1302779924401 0.011 -0.034 0.959555717830228 0.770854125016401 0.0531023128456561 -0.306214721632573 Q86TP1 PRUNE Q86TP1.S347.p_PRUNE Q86TP1_T344tS347s_2_2_344_347 Q86TP1 Q86TP1|Q86TP1-2|Q86TP1-3|Q86TP1-4|Q86TP1-7|Q86TP1-5|Q86TP1-6 Exopolyphosphatase PRUNE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10932.10932.4 7.11 7.11 7.111 7 2 2 0 810.9098 3078.6849 N335n N343n T344t S347s TMT10 326 (K) LTPASSTHPnLHAYLQGntQVsRK (K) LT(0.0)PAS(0.0)S(0.0)T(0.0)HPN(1.0)LHAY(0.0)LQGN(1.0)T(0.99)QVS(0.99)RK K:TMT10,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S PRUNE1 50826.3 1 4 3186.1 58.23 HUMAN 1 0.1793 -1.1303 LQGSSRLSPGTDSSS-p Q7Z3B3;S249-p LQGSSRLSPGTDSSS 0.714354134547226 0.962872227289093 -0.0506666666666667 0.00533333333333337 2.75408477152241 0.234369061575976 -0.0506666666666667 0.00533333333333337 0.530385353808512 0.947464821191986 -0.670005685217545 0.068997453111359 Q7Z3B3 KANSL1 Q7Z3B3.S249.p_KANSL1 Q7Z3B3_S249s _1_1_249_249 Q7Z3B3 Q7Z3B3 KAT8 regulatory NSL complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15391.15391.3 15.6 15.6 4.538 5 1 1 0 795.4197 2304.2811 S249s Hydrogen 248 (R) LsPGTDSSSNLGGVKLEGK (K) LS(0.99)PGT(0.0)DS(0.0)S(0.0)S(0.0)NLGGVKLEGK K:TMT10-Lys-Only,s:Phosphorylated S KANSL1 121821.3 10 3 391.1 332.08 HUMAN 1 -2.7541 0.2344 LQGYESGSEEEGEIH-p Q13523;S144-p LQGYESGSEEEGEIH 0.503727443653237 0.214427967317373 0.091 0.126666666666667 5.49613778989949 8.79858218295942 0.091 0.126666666666667 0.282089045301484 0.13186871727589 1.19425117822013 1.77287497769851 Q13523 PRPF4B Q13523.S144.p_PRPF4B Q13523_S142sS144s_2_2_142_144 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25841.26459.3 25.49 25.49 2.187 4 2 2 0 1108.8422 3164.5822 S142s S144s TMT10 129 (K) VQSGMGLILQGYEsGsEEEGEIHEK (A) VQS(0.0)GMGLILQGY(0.0)ES(0.99)GS(0.99)EEEGEIHEK K:TMT10,s:Phosphorylated S PRPF4B 117327.1 80 32 70.1 666.55 HUMAN 1 5.4961 8.7986 LQHHRVHSGERPYKC-p Q9H5H4;S508-p LQHHRVHSGERPYKC 0.935158220570074 0.00912714367681588 0.018 -0.815333333333333 0.570665294359935 28.8498009223935 0.018 -0.815333333333333 0.876866483951649 0.00130322651609119 0.162422151099808 -6.08050923798316 Q9H5H4 ZNF768 Q9H5H4.S508.p_ZNF768 Q9H5H4_S508s _1_1_508_508 Q9H5H4 Q9H5H4|H3BS42 Zinc finger protein 768 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5244.5244.4 9.55 9.55 9.548 2 1 1 0 644.5656 2495.2738 S508s TMT10 506 (R) VHsGERPYKCDDCGK (A) VHS(0.99)GERPY(0.0)KCDDCGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF768 61482.8 1 141 240.2 415.72 HUMAN 1 0.5707 -28.8498 LQHLAEVSAEGKLLF-p O95229-2;S171-p LQHLAEVSAEGKLLF 0.317454145797467 0.528764855094518 -0.163 -0.0653333333333333 9.33394198141114 3.72073351510393 -0.163 -0.0653333333333333 0.11657510139242 0.424547852567254 -1.86618673024377 -0.863217545914055 O95229 ZWINT O95229.2.S171.p_ZWINT O95229-2_S171s _1_1_171_171 O95229-2 O95229-2 Isoform 2 of ZW10 interactor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9632.9632.3 16.11 11.83 99 1 1 1 0 653.0145 1877.0645 S171s TMT10 163 (K) HLQHLAEVsAEGK (L) HLQHLAEVS(1.0)AEGK K:TMT10,s:Phosphorylated S ZWINT 25600.5 1 1 5807.1 16.11 HUMAN 1 -9.3339 -3.7207 LQHPKRVSQFLDDPS-p Q8IZY2;S2133-p LQHPKRVSQFLDDPS 0.567448794445481 0.806313780212511 0.125333333333333 -0.0256666666666667 4.53094414503959 1.30820480550578 0.125333333333333 -0.0256666666666667 0.352294274847145 0.739911060608453 1.01735381049361 -0.349460480580635 Q8IZY2 ABCA7 Q8IZY2.S2133.p_ABCA7 Q8IZY2_S2133s _1_1_2133_2133 Q8IZY2 Q8IZY2|Q8IZY2-2 ATP-binding cassette sub-family A member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28401.28401.3 12.63 8.6 4.972 4 1 1 0 696.3488 2007.0596 S2133s TMT10 2131 (K) RVsQFLDDPSTAETVL (-) RVS(0.99)QFLDDPS(0.0)T(0.0)AET(0.0)VL s:Phosphorylated S ABCA7 236399.3 1 5 1112.2 175.87 HUMAN 1 4.5309 -1.3082 LQHQCALSLRRFEAI-p Q8TDM6;S372-p LQHQCALSLRRFEAI 0.824144348915705 0.168233544021262 0.0366666666666667 0.160666666666667 1.62008126912327 10.1822935617788 0.0366666666666667 0.160666666666667 0.688639409778351 0.0958894094184195 0.422919826840757 2.01256898889119 Q8TDM6 DLG5 Q8TDM6.S372.p_DLG5 Q8TDM6_S372s _1_1_372_372 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15865.15865.3 10.22 10.22 10.224 2 1 1 0 688.3494 1983.0643 S372s TMT10 360 (R) DTAIQLQHQCALsLR (R) DT(0.0)AIQLQHQCALS(0.99)LR C:Carbamidomethylation,s:Phosphorylated S DLG5 215575.4 1 5 34.1 890.58 HUMAN 1 1.6201 10.1823 LQICQRKSDHLKEQF-p Q03001-3;S1527-p LQICQRKSDHLKEQF 0.0802188320632121 0.0367392901083018 -0.667666666666667 -0.294333333333333 23.4077147132955 19.3035682920033 -0.667666666666667 -0.294333333333333 0.00456276948784341 0.0117393262079796 -4.65147775789755 -3.72772281592321 Q03001 DST Q03001.3.S1527.p_DST Q03001-3_S1527s _1_1_1527_1527 Q03001-3 Q03001-3 Isoform 3 of Dystonin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10164.10164.5 7.81 4.21 99 1 1 1 0 459.4624 2213.3156 S1527s TMT10 1520 (R) LQICQRKsDHLK (E) LQICQRKS(1.0)DHLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DST 309146 1 23 796.4 223.72 HUMAN 1 -23.4077 -19.3036 LQILRQVSLIAPPQS-p Q9NPA5;S547-p LQILRQVSLIAPPQS 0.897872406508784 0.171062425445859 -0.0256666666666667 0.228666666666667 0.918165969637254 10.0820580750005 -0.0256666666666667 0.228666666666667 0.809437653420972 0.0981282813411181 -0.253223348831425 1.99515613738375 Q9NPA5 ZFP64 Q9NPA5.S547.p_ZFP64 Q9NPA5_S547s _1_1_547_547 Q9NPA5 Q9NPA5 Zinc finger protein 64 homolog, isoforms 1 and 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15829.15829.3 8.96 8.96 8.961 3 1 1 0 531.2847 1511.8743 S547s TMT10 545 (R) QVsLIAPPQSSR (C) QVS(0.99)LIAPPQS(0.0)S(0.0)R s:Phosphorylated S ZFP64 76467.9 1 1 3993.2 39.5 HUMAN 1 -0.9182 10.0821 LQKGCRLSPRDTYSD-p P17812;S562-p LQKGCRLSPRDTYSD 0.974078433477375 0.475196447350239 0.00699999999999999 0.0933333333333334 0.223527479842704 4.30930732903031 0.00699999999999999 0.0933333333333334 0.949832995267914 0.37073984762058 0.0658877717072623 0.975636447822354 P17812 CTPS1 P17812.S562.p_CTPS1 P17812_S562s _1_1_562_562 P17812 P17812|P17812-2 CTP synthase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3768.3768.3 9.44 4.81 99 1 1 1 0 385.5279 1074.604 S562s TMT10 558 (K) GCRLsPR (D) GCRLS(1.0)PR C:Carbamidomethylation,s:Phosphorylated S CTPS1 67373.8 2 1 2509.1 80.59 HUMAN 1 0.2235 4.3093 LQKKRKRSPKSGLGP-p E9PRY8;S141-p LQKKRKRSPKSGLGP 0.177952626351024 0.0181931822774972 0.535333333333333 -0.617333333333333 14.8347172206407 23.953237578228 0.535333333333333 -0.617333333333333 0.0328494632665462 0.00402416928731524 2.84750934968051 -4.77781595043187 E9PRY8 NotFound E9PRY8.S141.p_NotFound E9PRY8_S141s _1_1_141_141 E9PRY8 E9PRY8|P29692-2|A0A087X1X7 Elongation factor 1-delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22048.22048.4 7.25 4.02 1.254 3 1 1 0 694.4001 2694.6031 S141s Hydrogen 139 (R) KRsPKSGLGPADLALLGLSAER (V) KRS(0.99)PKS(0.0)GLGPADLALLGLS(0.0)AER K:TMT10-Lys-Only,s:Phosphorylated S EEF1D 77196.2 2 1 369.1 339.47 HUMAN 1 14.8347 -23.9532 LQKKSIDSNPYDTDK-p P46459;S109-p LQKKSIDSNPYDTDK 0.407186408153387 0.0808369700683631 -0.132333333333333 0.302 7.20752939016608 14.4864000279571 -0.132333333333333 0.302 0.190216007099004 0.0355926232187474 -1.49729347488178 2.78092959647685 P46459 NSF P46459.S109.p_NSF P46459_S109s _1_1_109_109 P46459 P46459|I3L0N3|P46459-2 Vesicle-fusing ATPase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11761.11761.3 8.95 8.95 1.389 4 1 1 0 717.3745 2070.1322 S109s TMT10 105 (K) KSIDsNPYDTDK (M) KS(0.0)IDS(0.99)NPY(0.0)DT(0.0)DK K:TMT10,s:Phosphorylated S NSF 83106.4 1 2 2984.1 64.07 HUMAN 1 -7.2075 14.4864 LQKLARGSLVGGGRQ-p Q9NZB2-6;S30-p LQKLARGSLVGGGRQ 0.987481982540924 0.0237926524415323 -0.00400000000000001 0.354333333333333 0.110545139307426 22.1385975557579 -0.00400000000000001 0.354333333333333 0.974867261808564 0.00611139345046306 -0.0329873693304162 4.34905879195136 Q9NZB2 FAM120A Q9NZB2.6.S30.p_FAM120A Q9NZB2-6_S30s _1_1_30_30 Q9NZB2-6 Q9NZB2-6 Isoform F of Constitutive coactivator of PPAR-gamma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8616.8616.3 11.77 11.77 99 1 1 1 0 451.2517 1271.7745 S30s TMT10 26 (K) LARGsLVGGGR (Q) LARGS(1.0)LVGGGR s:Phosphorylated S FAM120A 126524.7 1 1 839.1 214.86 HUMAN 1 -0.1105 22.1386 LQKLQMESPDLPKPL-p Q07002-2;S117-p LQKLQMESPDLPKPL 0.645332657174579 0.129079421474235 -0.089 0.181333333333333 3.55897691057788 11.7192761616558 -0.089 0.181333333333333 0.440658659463833 0.0673088830609749 -0.831829470466941 2.28153153200851 Q07002 CDK18 Q07002.2.S117.p_CDK18 Q07002-2_S117s _1_1_117_117 Q07002-2 Q07002-3|Q07002-2 Isoform 2 of Cyclin-dependent kinase 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21601.21601.4 13.87 13.87 13.872 2 1 1 0 538.0449 2069.1829 S117s TMT10 113 (K) LQMEsPDLPKPLSR (M) LQMES(0.99)PDLPKPLS(0.0)R K:TMT10,s:Phosphorylated S CDK18 54765.8 5 6 1225.1 164.54 HUMAN 1 -3.559 11.7193 LQKPKIWSLAETATS-p P78415;S351-p LQKPKIWSLAETATS 0.527370205367512 0.0546957890003969 -0.0933333333333333 0.289 5.13997237137659 16.8207325420703 -0.0933333333333334 0.289 0.306198291312393 0.0207934592583389 -1.12964798934483 3.22498435696563 P78415 IRX3 P78415.S351.p_IRX3 P78415_S351sT355t_2_2_351_355 P78415 P78415 Iroquois-class homeodomain protein IRX-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26603.26603.5 16.21 12.34 1.191 8 2 2 0 992.8941 4800.5131 S351s T355t TMT10 349 (K) IWsLAEtATSPDNPRRSPPGAGGSPPGAAVAPSALQLSPAAAAAAAHR (L) IWS(0.99)LAET(0.99)AT(0.0)S(0.0)PDNPRRS(0.0)PPGAGGS(0.0)PPGAAVAPS(0.0)ALQLS(0.0)PAAAAAAAHR s:Phosphorylated S,t:Phosphorylated T IRX3 52232 5 5 2172.1 94.55 HUMAN 1 -5.14 16.8207 LQKRNPASPSKSSPM-p Q8NDB6;S11-p LQKRNPASPSKSSPM 0.050054490215346 0.148154826160214 0.468333333333333 -0.147 28.7139904481378 10.9195367246333 0.468333333333333 -0.147 0.00134462429889463 0.0809182212545944 6.05019614355564 -2.14106158412616 Q8NDB6 FAM156A Q8NDB6.S11.p_FAM156A Q8NDB6_S11s _1_1_11_11 Q8NDB6 Q8NDB6|A0A087WZE8 Protein FAM156A/FAM156B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.4135.4135.3 9.9 2.78 1.358 2 1 1 0 465.5899 1314.7894 S11s TMT10 7 (K) RNPAsPSK (S) RNPAS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S FAM156A 24582.2 4 1 5366.1 20.04 HUMAN 1 28.714 -10.9195 LQKTTNSSLEEIMDK-p Q709C8;S737-p LQKTTNSSLEEIMDK 0.467528317100315 0.0648250844466497 -0.129666666666667 0.239 6.0978500924918 15.8128166309482 -0.129666666666667 0.239 0.245592438210485 0.026225171497186 -1.30197606071524 3.03022088347961 Q709C8 VPS13C Q709C8.S737.p_VPS13C Q709C8_S737s _1_1_737_737 Q709C8 Q709C8|Q709C8-3|Q709C8-2|Q709C8-4 Vacuolar protein sorting-associated protein 13C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21096.21096.2 10.24 10.24 1.116 4 1 1 0 953.4678 1825.9618 S737s TMT10 733 (K) TTNSsLEEIMDK (A) T(0.0)T(0.0)NS(0.0)S(0.99)LEEIMDK K:TMT10,s:Phosphorylated S VPS13C 424721.6 3 1 1924.1 106.81 HUMAN 1 -6.0979 15.8128 LQLALRLSRQEHEKE-p Q9H201;S248-p LQLALRLSRQEHEKE 0.223361512903295 0.00514266245426322 -0.798666666666667 0.877333333333333 12.5099170968224 33.3049394196678 -0.798666666666667 0.877333333333333 0.056105868607045 0.000467203468211603 -2.42312013269318 7.49055317840905 Q9H201 EPN3 Q9H201.S248.p_EPN3 Q9H201_S248s _1_1_248_248 Q9H201 Q9H201|I6L9I8 Epsin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5626.5626.4 7.87 0.52 99 1 1 1 0 658.3406 2550.3837 S248s Hydrogen 236 (R) DEDLQLQLALRLsRQEHEK (E) DEDLQLQLALRLS(1.0)RQEHEK K:TMT10-Lys-Only,s:Phosphorylated S EPN3 68392.2 2 5 953.1 196.01 HUMAN 1 -12.5099 33.3049 LQLEKQNSLILKDLE-p Q8WXW3;S592-p LQLEKQNSLILKDLE 0.709670809730963 0.819478478551349 0.0586666666666667 -0.0256666666666666 2.80013888023375 1.21021271541078 0.0586666666666667 -0.0256666666666666 0.524790678038525 0.756795826606725 0.679517445186436 -0.325774440519938 Q8WXW3 PIBF1 Q8WXW3.S592.p_PIBF1 Q8WXW3_S592s _1_1_592_592 Q8WXW3 Q8WXW3|A0A087WUI6|Q8WXW3-2 Progesterone-induced-blocking factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17427.17427.2 8.86 1.98 99 1 1 1 0 677.3983 1273.8244 S592s TMT10 590 (K) QNsLILK (D) QNS(1.0)LILK K:TMT10,s:Phosphorylated S PIBF1 90088.3 1 1 5166.1 22.26 HUMAN 1 2.8001 -1.2102 LQLERPVSPETQADL-p Q9P206-3;S940-p LQLERPVSPETQADL 0.441027182521617 0.101232867655992 -0.103666666666667 -0.232666666666667 6.54920477153846 13.1426337706495 -0.103666666666667 -0.232666666666667 0.221349998232076 0.0484994287093002 -1.38184942332709 -2.53539145459894 Q9P206 KIAA1522 Q9P206.3.S940.p_KIAA1522 Q9P206-3_S940s _1_1_940_940 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14098.14098.4 15.95 13.6 1.26 2 1 1 0 662.3647 2566.4717 S940s TMT10 932 (R) KLQLERPVsPETQADLQR (N) KLQLERPVS(0.99)PET(0.0)QADLQR K:TMT10,s:Phosphorylated S KIAA1522 108782.6 6 35 62.1 704.36 HUMAN 1 -6.5492 -13.1426 LQLERTVSTSSQPEE-p P42684-6;S796-p LQLERTVSTSSQPEE 0.655422066970777 0.0725699982391305 0.0723333333333333 -0.232 3.4410844653416 15.1402629798467 0.0723333333333333 -0.232 0.452784502157492 0.0306177802716844 0.8086619861664 -2.90288322364025 P42684 ABL2 P42684.6.S796.p_ABL2 P42684-6_S796s _1_1_796_796 P42684-6 P42684-3|P42684-6|P42684-2|P42684-5|P42684-10|P42684-7 Isoform 6 of Abelson tyrosine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15847.15847.3 13.5 13.5 1.167 5 1 1 0 952.7955 2776.4187 S796s TMT10 794 (R) TVsTSSQPEENVDRANDMLPK (K) T(0.0)VS(0.99)T(0.0)S(0.0)S(0.0)QPEENVDRANDMLPK K:TMT10,s:Phosphorylated S ABL2 127186.4 3 9 615.1 261.3 HUMAN 1 3.4411 -15.1403 LQLKRRRTEEGPTLS-p A8MXP9;T150-p LQLKRRRTEEGPTLS 0.199966867122765 0.448707636571572 0.254 0.111 13.6000358649472 4.64001622024286 0.254 0.111 0.0436512227415955 0.343556664765233 2.61977317912156 1.03745881640154 A8MXP9 NotFound A8MXP9.T150.p_NotFound A8MXP9_T150t _1_1_150_150 A8MXP9 A8MXP9|P43243 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3787.3787.4 9.79 9.79 3.126 4 1 1 0 497.5074 1907.0409 T150t TMT10 147 (K) RRRtEEGPTLSYGR (D) RRRT(0.99)EEGPT(0.0)LS(0.0)Y(0.0)GR t:Phosphorylated T MATR3 100478.9 1 10 92.1 615.57 HUMAN 1 13.6 4.64 LQLPGAPSPLEKASR-p Q9BWN1;S42-p LQLPGAPSPLEKASR 0.38832711154694 0.00254618099654844 -0.131 -0.719333333333333 7.60062557099249 39.6667224095404 -0.131 -0.719333333333334 0.173755052865523 0.000107976130320981 -1.56579279671538 -9.98246090216677 Q9BWN1 PRR14 Q9BWN1.S42.p_PRR14 Q9BWN1_S42s _1_1_42_42 Q9BWN1 Q9BWN1 Proline-rich protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25430.25430.3 11.56 11.56 99 1 1 1 0 596.6737 1708.0409 S42s TMT10 35 (R) LQLPGAPsPLEK (A) LQLPGAPS(1.0)PLEK K:TMT10,s:Phosphorylated S PRR14 64726.7 2 3 874.1 209.43 HUMAN 1 -7.6006 -39.6667 LQLQDQGSKMLLDSV-p Q96GC5;S142-p LQLQDQGSKMLLDSV 0.80753628092637 0.0729073621604936 -0.0783333333333333 0.251333333333333 1.78390741202824 15.1047257867977 -0.0783333333333334 0.251333333333333 0.66314615945747 0.0308693454834101 -0.460396567616709 2.89620965134177 Q96GC5 MRPL48 Q96GC5.S142.p_MRPL48 Q96GC5_S142s _1_1_142_142 Q96GC5 Q96GC5|Q96GC5-3|F5H702 39S ribosomal protein L48, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23121.23121.3 12.93 9.01 12.759 2 1 1 0 666.3611 1917.1057 S142s TMT10 131 (K) TIEVLQLQDQGsK (M) T(0.0)IEVLQLQDQGS(0.99)K K:TMT10,s:Phosphorylated S MRPL48 24048.4 1 1 6236.1 12.93 HUMAN 1 -1.7839 15.1047 LQLSLADSPLKLRKS-p Q8IV32;S208-p LQLSLADSPLKLRKS 0.0691244016116837 0.00106567586669276 -0.437333333333333 -1.44033333333333 25.0019872995716 50.4099224512775 -0.437333333333333 -1.44033333333333 0.00316083095622105 9.09929520419134e-06 -5.04428011650066 -15.9729638211461 Q8IV32 CCDC71 Q8IV32.S208.p_CCDC71 Q8IV32_S208s _1_1_208_208 Q8IV32 Q8IV32 Coiled-coil domain-containing protein 71 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24754.24754.3 18.76 14.07 1.309 3 1 1 0 670.3745 1929.1421 S208s TMT10 198 (K) AQSLQLSLADsPLK (L) AQS(0.0)LQLS(0.0)LADS(0.99)PLK K:TMT10,s:Phosphorylated S CCDC71 49818.4 1 2 3496.1 49.75 HUMAN 1 -25.002 -50.4099 LQMEEMESQIREEIR-p Q9Y4D7;S1316-p LQMEEMESQIREEIR 0.046233568214428 0.412298602190356 -0.860666666666667 -0.099 29.6532410776069 5.11846669570851 -0.860666666666667 -0.099 0.00108311829663461 0.307718304202499 -6.32731126022787 -1.12549200650459 Q9Y4D7 PLXND1 Q9Y4D7.S1316.p_PLXND1 Q9Y4D7_S1316s _1_1_1316_1316 Q9Y4D7 Q9Y4D7|Q9Y4D7-2 Plexin-D1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29302.29302.4 13.39 13.39 6.52 2 1 1 0 701.1133 2721.4679 S1316s TMT10 1307 (K) TLLQMEEMEsQIREEIRK (G) T(0.0)LLQMEEMES(0.99)QIREEIRK K:TMT10,s:Phosphorylated S PLXND1 215426.4 1 1 4426.1 31.59 HUMAN 1 -29.6532 -5.1185 LQMEKRPSLPV____-p J3QR46;S96-p LQMEKRPSLPV____ 0.156450973477083 0.08780662083977 1.18566666666667 -0.893333333333333 16.1623921386308 13.9864928516995 1.18566666666667 -0.893333333333334 0.0241969588625374 0.0399347265361873 3.09943367807646 -2.68882780359859 J3QR46 KIAA0040 J3QR46.S96.p_KIAA0040 J3QR46_S96s _1_1_96_96 J3QR46 J3QR46 Uncharacterized protein KIAA0040 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23511.23511.3 9.97 7.64 99 1 1 1 0 650.373 1869.1396 S96s TMT10 88 (K) LLQMEKRPsLPV (-) LLQMEKRPS(1.0)LPV K:TMT10,s:Phosphorylated S KIAA0040 11719.8 2 1 6722.1 9.97 HUMAN 1 16.1624 -13.9865 LQMTSAASPHPGLLL-p Q9H2Y7;S661-p LQMTSAASPHPGLLL 0.136120325935342 0.00467082302523188 -0.337 -0.574666666666667 17.768735092975 34.0857857650855 -0.337 -0.574666666666667 0.0167157739970626 0.000390320555772842 -3.41561208543929 -7.76364904577621 Q9H2Y7 ZNF106 Q9H2Y7.S661.p_ZNF106 Q9H2Y7_S661s _1_1_661_661 Q9H2Y7 Q9H2Y7 Zinc finger protein 106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27897.27897.3 21.2 21.2 2.289 4 1 1 0 925.817 2695.4741 S661s TMT10 651 (K) ESELQMTSAAsPHPGLLLDLK (T) ES(0.0)ELQMT(0.0)S(0.0)AAS(0.99)PHPGLLLDLK K:TMT10,s:Phosphorylated S ZNF106 210818.9 2 3 170.1 490.3 HUMAN 1 -17.7687 -34.0858 LQMVRLRSVGAPGGA-p Q9P206-3;S843-p LQMVRLRSVGAPGGA 0.829037105999495 0.0292617695564151 0.0383333333333333 -0.285 1.56527502096592 20.7583785878552 0.0383333333333334 -0.285 0.697384832948894 0.00839773452332759 0.410221619191938 -4.03966571213597 Q9P206 KIAA1522 Q9P206.3.S843.p_KIAA1522 Q9P206-3_S843s _1_1_843_843 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14256.14256.4 13.49 13.49 13.492 3 1 1 0 773.192 3009.7838 S843s TMT10 841 (R) LRsVGAPGGAPTPALGPSAPQKPLRR (A) LRS(0.99)VGAPGGAPT(0.0)PALGPS(0.0)APQKPLRR K:TMT10,s:Phosphorylated S KIAA1522 108782.6 1 32 62.1 704.36 HUMAN 1 1.5653 -20.7584 LQNAEEESESEGEEN-p Q9Y6E2;S412-p LQNAEEESESEGEEN 0.50556949003824 0.0874691243817156 -0.097 0.187333333333333 5.46922051107305 14.0085717837108 -0.097 0.187333333333333 0.283842843509601 0.039732219094695 -1.18939269065781 2.69287582330962 Q9Y6E2 BZW2 Q9Y6E2.S412.p_BZW2 Q9Y6E2_S412sS414s_2_2_412_414 Q9Y6E2 Q9Y6E2|B5MCH7|B5MCE7|E9PFD4 Basic leucine zipper and W2 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.32134.32736.3 20.75 20.75 99 2 2 2 0 1001.0967 2841.3467 S412s S414s TMT10 400 (K) KFVEWLQNAEEEsEsEGEEN (-) KFVEWLQNAEEES(1.0)ES(1.0)EGEEN K:TMT10,s:Phosphorylated S BZW2 48389.7 24 2 4081.1 37.96 HUMAN 1 -5.4692 14.0086 LQNIIPASTGAAKAV-p P04406;S210-p LQNIIPASTGAAKAV 0.64672362729872 0.0397927855865107 0.0666666666666667 0.345333333333333 3.5451293050004 18.7811288751034 0.0666666666666667 0.345333333333333 0.442065954795109 0.013239973397318 0.829116723523602 3.61898620027199 P04406 GAPDH P04406.S210.p_GAPDH P04406_S210s _1_1_210_210 P04406 P04406|P04406-2|E7EUT5 Glyceraldehyde-3-phosphate dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21816.21816.3 17.92 17.39 1.645 2 1 1 0 650.6995 1870.1162 S210s TMT10 201 (R) GALQNIIPAsTGAAK (A) GALQNIIPAS(0.99)T(0.0)GAAK K:TMT10,s:Phosphorylated S GAPDH 36223.7 5 5 1327.1 153.64 HUMAN 1 3.5451 18.7811 LQNQAEASSKIIGQF-p Q12931;S194-p LQNQAEASSKIIGQF 0.238967483538385 0.183498524131644 -0.221333333333333 0.237666666666667 11.8860335086082 9.68438781837503 -0.221333333333333 0.237666666666667 0.0647733932993109 0.107537817504757 -2.31213629989227 1.92617479335157 Q12931 TRAP1 Q12931.S194.p_TRAP1 Q12931_S194s _1_1_194_194 Q12931 Q12931|Q12931-2 Heat shock protein 75 kDa, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24768.24768.3 18 14.96 1.202 2 1 1 0 711.0334 2051.1173 S194s TMT10 182 (K) AFLDALQNQAEAsSK (I) AFLDALQNQAEAS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S TRAP1 80393.8 2 47 43.4 810.87 HUMAN 1 -11.886 9.6844 LQNRNYPSQEELIKV-p P38398;S1524-p LQNRNYPSQEELIKV 0.643274882960236 0.00259997565261951 0.0616666666666667 -0.689333333333333 3.58107965091317 39.4100310768337 0.0616666666666667 -0.689333333333333 0.438421693115221 0.000114550474452172 0.836154802463448 -9.8691394535207 P38398 BRCA1 P38398.S1524.p_BRCA1 P38398_S1524s _1_1_1524_1524 P38398 P38398-7|P38398-4|P38398-8|P38398-3|P38398-5|P38398-6|K7EPC7 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32595.32595.5 15.2 15.2 8.594 7 1 1 0 922.8552 4530.2928 S1524s TMT10 1521 (R) NYPsQEELIKVVDVEEQQLEESGPHDLTETSYLPR (Q) NY(0.0)PS(0.99)QEELIKVVDVEEQQLEES(0.0)GPHDLT(0.0)ET(0.0)S(0.0)Y(0.0)LPR K:TMT10,s:Phosphorylated S BRCA1 210227.6 4 20 106.1 588.91 HUMAN 1 3.5811 -39.41 LQPDAYGSLDRATSP-p Q8WUF5;S134-p LQPDAYGSLDRATSP 0.398390547111241 0.811069973749858 0.125666666666667 -0.0326666666666667 7.37629847705687 1.27501318337994 0.125666666666667 -0.0326666666666667 0.182965898321686 0.745587608729477 1.52673468657633 -0.341472756737824 Q8WUF5 PPP1R13L Q8WUF5.S134.p_PPP1R13L Q8WUF5_S134s _1_1_134_134 Q8WUF5 Q8WUF5 RelA-associated inhibitor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23194.23194.2 13.81 10.81 4.962 4 1 1 0 1009.4991 1938.017 S134s TMT10 123 (R) TPLYLQPDAYGsLDR (A) T(0.0)PLY(0.0)LQPDAY(0.0)GS(0.99)LDR s:Phosphorylated S PPP1R13L 89431.8 3 7 371.1 339.39 HUMAN 1 7.3763 -1.275 LQPEPINTPTHTKQQ-p P46013;T1017-p LQPEPINTPTHTKQQ 0.588826346869698 0.0044527191009727 0.0803333333333333 -0.708333333333333 4.23648727389701 34.5335679786103 0.0803333333333334 -0.708333333333333 0.377008613485521 0.000352081497018108 0.962072959502397 -7.92407278045083 P46013 MKI67 P46013.T1017.p_MKI67 P46013_T1017t _1_1_1017_1017 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15714.15714.3 21.28 21.28 3.264 4 1 1 0 873.1023 2537.3256 T1017t TMT10 1005 (K) MPCQSLQPEPINtPTHTK (Q) MPCQS(0.0)LQPEPINT(0.99)PT(0.0)HT(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MKI67 360912.4 3 21 5.1 1918.46 HUMAN 1 4.2365 -34.5336 LQPEVPLSPAEQATT-p Q2NL68;S356-p LQPEVPLSPAEQATT 0.640962870314288 0.00885809255924247 -0.119 -0.498666666666667 3.60702253636433 29.0835067641269 -0.119 -0.498666666666667 0.435810557051228 0.00123494985531908 -0.841224471781747 -6.14869664793029 Q2NL68 PROSER3 Q2NL68.S356.p_PROSER3 Q2NL68_S356s _1_1_356_356 Q2NL68 Q2NL68 Proline and serine-rich protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21027.21027.4 25.33 25.33 7.612 6 1 1 0 915.9851 3580.95 S356s TMT10 338 (R) KSEATPSPGACLQPEVPLsPAEQATTVK (A) KS(0.0)EAT(0.0)PS(0.0)PGACLQPEVPLS(0.99)PAEQAT(0.0)T(0.0)VK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PROSER3 51188 3 2 2513.1 80.39 HUMAN 1 -3.607 -29.0835 LQPLNKCSPDNKPSL-p I6L8A6;S568-p LQPLNKCSPDNKPSL 0.380643803112374 0.163226288290066 -0.191333333333333 0.201333333333333 7.75324930690437 10.3499608229756 -0.191333333333333 0.201333333333333 0.167754843934373 0.0922579749564513 -1.59232457726289 2.04172320482669 I6L8A6 NotFound I6L8A6.S568.p_NotFound I6L8A6_S568s _1_1_568_568 I6L8A6 Q99708-2|I6L8A6 DNA endonuclease RBBP8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23628.23628.5 21.71 21.71 3.861 4 1 1 0 910.6744 4469.3648 S568s TMT10 548 (K) DSPGEPCSQECIILQPLNKCsPDNKPSLQIK (E) DS(0.0)PGEPCS(0.0)QECIILQPLNKCS(0.99)PDNKPS(0.0)LQIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RBBP8 103921.2 5 10 258.1 398.22 HUMAN 1 -7.7532 10.35 LQPRVPPSPDDLPSR-p Q8IYJ3;S392-p LQPRVPPSPDDLPSR 0.490960533046486 0.567866779963253 0.100333333333333 0.057 5.69004927982073 3.31274110220108 0.100333333333333 0.057 0.269770882110471 0.466364935527689 1.22914535010725 0.783131559179045 Q8IYJ3 SYTL1 Q8IYJ3.S392.p_SYTL1 Q8IYJ3_S392s _1_1_392_392 Q8IYJ3 Q8IYJ3|Q8IYJ3-2|A0A087X1N4 Synaptotagmin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13483.14155.2 12.5 7.69 6.267 2 1 1 0 744.8688 1408.7634 S392s TMT10 389 (R) VPPsPDDLPSR (G) VPPS(0.99)PDDLPS(0.0)R s:Phosphorylated S SYTL1 62141.3 5 9 1335.1 152.58 HUMAN 1 5.69 3.3127 LQPSSKASLESTSDL-p Q8TEP8-3;S2080-p LQPSSKASLESTSDL 0.443006794709838 0.0379661432129493 0.111333333333333 -0.353 6.51665947795681 19.0785486958039 0.109203754740382 -0.353 0.223014988448719 0.0123636052537071 1.37611243208755 -3.68068458962127 Q8TEP8 NotFound Q8TEP8.3.S2080.p_NotFound Q8TEP8-3_S2080s _1_1_2080_2080 Q8TEP8-3 Q8TEP8-3|A0A0A0MR42 Isoform 3 of Centrosomal protein of 192 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20588.20588.3 15.62 15.62 1.223 7 1 1 0 1002.8636 2926.5976 S2080s TMT10 2071 (R) EFLQPSSKAsLESTSDLGASGK (H) EFLQPS(0.0)S(0.0)KAS(0.99)LES(0.0)T(0.0)S(0.0)DLGAS(0.0)GK K:TMT10,s:Phosphorylated S CEP192 281787.5 2 16 491.1 293.99 HUMAN 1 6.5167 -19.0785 LQQDELDSYPDSVKK-p Q9NQS3;S465-p LQQDELDSYPDSVKK 0.151514767715561 0.416413493043551 -0.248 -0.0923333333333333 16.5010659791374 5.0610732395198 -0.248 -0.0923333333333334 0.022381717101791 0.311811893142978 -3.16500123608165 -1.11501071725175 Q9NQS3 PVRL3 Q9NQS3.S465.p_PVRL3 Q9NQS3_S465s _1_1_465_465 Q9NQS3 Q9NQS3 Nectin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21556.21556.4 16.7 16.7 6.099 4 1 1 0 801.6648 3123.6665 S465s TMT10 452 (K) ESQIDVLQQDELDsYPDSVKK (E) ES(0.0)QIDVLQQDELDS(0.99)Y(0.0)PDS(0.0)VKK K:TMT10,s:Phosphorylated S NECTIN3 61514.8 2 1 5740.1 16.7 HUMAN 1 -16.5011 -5.0611 LQQFSPLSDYEGQEE-p Q9UK61;S636-p LQQFSPLSDYEGQEE 0.465533819815265 0.332906585046097 0.0996666666666667 0.108666666666667 6.12743963486628 6.33078179809968 0.0996666666666667 0.108666666666667 0.243924844337293 0.232767220248844 1.30723425992571 1.3429465553806 Q9UK61 FAM208A Q9UK61.S636.p_FAM208A Q9UK61_S636s _1_1_636_636 Q9UK61 Q9UK61|Q9UK61-4|Q9UK61-3|Q9UK61-2|A0A087X0F1 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24485.24485.4 17.6 17.6 1.899 4 1 1 0 742.8496 2888.4024 S636s TMT10 629 (K) LQQFSPLsDYEGQEEEMNGTK (M) LQQFS(0.0)PLS(0.99)DY(0.0)EGQEEEMNGT(0.0)K K:TMT10,s:Phosphorylated S FAM208A 190568.5 3 4 246.1 411.17 HUMAN 1 6.1274 6.3308 LQQHLQDSQQEISSM-p P42566;S485-p LQQHLQDSQQEISSM 0.179935774950283 0.629617794707314 -0.253 -0.051 14.6992914638467 2.73136974591415 -0.253 -0.051 0.0338899441879732 0.533166710504159 -2.82224099641734 -0.66521291037827 P42566 EPS15 P42566.S485.p_EPS15 P42566_S485s _1_1_485_485 P42566 P42566|P42566-2 Epidermal growth factor receptor substrate 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20582.20582.4 19.92 19.92 4.023 3 1 1 0 809.6529 3155.6229 S485s TMT10 473 (K) AQLEPLQQHLQDsQQEISSMQMK (L) AQLEPLQQHLQDS(0.99)QQEIS(0.0)S(0.0)MQMK K:TMT10,s:Phosphorylated S EPS15 99281.5 3 6 342.1 353.17 HUMAN 1 -14.6993 -2.7314 LQQQAALSPTTAPAV-p Q8WXI9;S486-p LQQQAALSPTTAPAV 0.409132968523052 0.0599691564673186 -0.146666666666667 0.251333333333333 7.15578046172351 16.2815792292967 -0.146666666666667 0.251333333333333 0.192496108317666 0.0235419307069049 -1.48825515672197 3.12019187279825 Q8WXI9 GATAD2B Q8WXI9.S486.p_GATAD2B Q8WXI9_S486s _1_1_486_486 Q8WXI9 Q8WXI9|A0A0U1RRM1 Transcriptional repressor p66-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20476.20476.3 17.62 17.62 1.223 7 1 1 0 1094.2479 3200.7713 S486s TMT10 479 (R) LQQQAALsPTTAPAVSSVSKQETIMR (H) LQQQAALS(0.99)PT(0.0)T(0.0)APAVS(0.0)S(0.0)VS(0.0)KQET(0.0)IMR K:TMT10,s:Phosphorylated S GATAD2B 65601.9 5 7 870.1 209.9 HUMAN 1 -7.1558 16.2816 LQQVLQLSLTDK___-p Q8IZ07;S586-p LQQVLQLSLTDK___ 0.645994943794365 0.670833182441014 -0.0713333333333333 0.0866666666666667 3.55240545210825 2.36998423067929 -0.0713333333333334 0.0866666666666666 0.441325939880821 0.579430800348048 -0.830542398960284 0.589190257796444 Q8IZ07 ANKRD13A Q8IZ07.S586.p_ANKRD13A Q8IZ07_S586s _1_1_586_586 Q8IZ07 Q8IZ07 Ankyrin repeat domain-containing protein 13A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.35031.35031.3 15.99 11.83 2.493 2 1 1 0 918.1537 2672.4758 S586s TMT10 572 (R) LQEEEAELQQVLQLsLTDK (-) LQEEEAELQQVLQLS(0.99)LT(0.0)DK K:TMT10,s:Phosphorylated S ANKRD13A 68017.2 1 2 4691.1 27.88 HUMAN 1 -3.5524 2.37 LQQYPRGSSDRWDKI-p Q96KC8;S516-p LQQYPRGSSDRWDKI 0.101232677965616 0.0196754678220892 -0.311 -0.536666666666667 21.0223635564158 23.4181395603668 -0.311 -0.536666666666667 0.00790248434851429 0.00455183010624636 -4.10187738277676 -4.64864750106511 Q96KC8 DNAJC1 Q96KC8.S516.p_DNAJC1 Q96KC8_S516s _1_1_516_516 Q96KC8 Q96KC8 DnaJ homolog subfamily C member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25827.25827.4 14.58 14.58 1.126 3 1 1 0 704.1251 2733.5088 S516s TMT10 504 (K) LLELALQQYPRGsSDRWDK (I) LLELALQQY(0.0)PRGS(0.99)S(0.0)DRWDK K:TMT10,s:Phosphorylated S DNAJC1 64224 1 6 1670.1 122.29 HUMAN 1 -21.0224 -23.4181 LQRAPLKSVGPDFGK-p P78527;S2695-p LQRAPLKSVGPDFGK 0.0691244016116837 0.460945870089644 -0.604333333333333 -0.151 25.0113660151447 4.4852545975263 -0.604333333333334 -0.151 0.00315401241496414 0.356020118368888 -5.04665601532601 -1.0086358350296 P78527 PRKDC P78527.S2695.p_PRKDC P78527_S2695s _1_1_2695_2695 P78527 P78527|P78527-2 DNA-dependent protein kinase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13591.13591.3 9.28 9.28 99 1 1 1 0 567.9908 1621.9881 S2695s TMT10 2695 (K) sVGPDFGKK (R) S(1.0)VGPDFGKK K:TMT10,s:Phosphorylated S PRKDC 474044.1 1 11 362.1 342.68 HUMAN 1 -25.0114 -4.4853 LQREGMGSPAYEQDL-p Q96M11;S179-p LQREGMGSPAYEQDL 0.615310790207356 0.0360206737283437 0.0853333333333333 0.263666666666667 3.9143605993257 19.4285628173985 0.0853333333333333 0.263666666666667 0.406035438411816 0.0114062718547991 0.900723781384002 3.75398747517508 Q96M11 HYLS1 Q96M11.S179.p_HYLS1 Q96M11_S179s _1_1_179_179 Q96M11 Q96M11 Hydrolethalus syndrome protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20038.20038.4 20.75 20.75 6.08 3 1 1 0 647.3318 2506.3376 S179s TMT10 175 (R) EGMGsPAYEQDLIVASRPK (S) EGMGS(0.99)PAY(0.0)EQDLIVAS(0.0)RPK K:TMT10,s:Phosphorylated S HYLS1 34586.5 3 2 3892.1 41.25 HUMAN 1 3.9144 19.4286 LQREYQISAGDFPEV-p Q9H223;S352-p LQREYQISAGDFPEV 0.820904102287946 0.553711212584137 0.0333333333333333 0.0726666666666667 1.64962065891926 3.45817172316825 0.0333333333333333 0.0726666666666667 0.683971387187175 0.451006527641464 0.429729727447285 0.811905817196627 Q9H223 EHD4 Q9H223.S352.p_EHD4 Q9H223_S352s _1_1_352_352 Q9H223 Q9H223 EH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23417.23417.3 12.37 9.84 10.401 2 1 1 0 674.3381 1941.037 S352s TMT10 348 (R) EYQIsAGDFPEVK (A) EY(0.0)QIS(0.99)AGDFPEVK K:TMT10,s:Phosphorylated S EHD4 61402.2 1 3 1561.1 131.45 HUMAN 1 1.6496 3.4582 LQRLIPGSNLDSEPR-p Q6P4E1;S328-p LQRLIPGSNLDSEPR 0.447122526893569 0.753571722411086 0.174333333333333 -0.0483333333333333 6.44697829112694 1.69760959013518 0.174333333333333 -0.0483333333333333 0.226622053691688 0.676455202147702 1.36381829167159 -0.440694536765393 Q6P4E1 CASC4 Q6P4E1.S328.p_CASC4 Q6P4E1_S328s _1_1_328_328 Q6P4E1 Q6P4E1-4|Q6P4E1-5|Q6P4E1-2 Protein CASC4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18720.18720.2 11.05 4.45 2.514 2 1 1 0 803.9067 1526.8376 S328s TMT10 324 (R) LIPGsNLDSEPR (I) LIPGS(0.99)NLDS(0.0)EPR s:Phosphorylated S CASC4 48977.6 3 2 2657.1 74.96 HUMAN 1 6.447 -1.6976 LQRLLGPSAAADILQ-p Q7Z6Z7;S2584-p LQRLLGPSAAADILQ 0.427827084939138 0.364528685027646 0.151666666666667 0.106666666666667 6.79008383804727 5.80957885339206 0.151666666666667 0.106666666666667 0.209407203060678 0.262447303299275 1.42421611890667 1.25027770879611 Q7Z6Z7 HUWE1 Q7Z6Z7.S2584.p_HUWE1 Q7Z6Z7_S2584s _1_1_2584_2584 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.37120.37120.3 30.79 30.79 16.407 5 1 1 0 849.4646 2466.4129 S2584s TMT10 2580 (R) LLGPsAAADILQLSSSLPLQSR (G) LLGPS(0.99)AAADILQLS(0.0)S(0.0)S(0.0)LPLQS(0.0)R s:Phosphorylated S HUWE1 485818.9 3 32 11.1 1210.45 HUMAN 1 6.7901 5.8096 LQRNRPDSGVEEAWK-p O60437;S887-p LQRNRPDSGVEEAWK 0.0734347857517839 0.0335354303873466 -0.441333333333333 -0.272 24.3449143591107 19.8750566272741 -0.441333333333333 -0.272 0.00367712644432212 0.0102918710762709 -4.87975424000738 -3.84861471640915 O60437 PPL O60437.S887.p_PPL O60437_S887s _1_1_887_887 O60437 O60437|K7EKI8 Periplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12485.12485.3 10.83 10.83 99 1 1 1 0 642.6559 1845.9859 S887s TMT10 883 (R) NRPDsGVEEAWK (I) NRPDS(1.0)GVEEAWK K:TMT10,s:Phosphorylated S PPL 205313.7 2 4 2268.1 90.52 HUMAN 1 -24.3449 -19.8751 LQRQASPSIVIALAG-p P61020;S125-p LQRQASPSIVIALAG 0.617427434886296 0.0810281872315181 -0.0766666666666667 0.225333333333333 3.88670318783509 14.4728564183823 -0.0766666666666667 0.225333333333333 0.408629467038388 0.0357037931835413 -0.895409943564813 2.77842174732679 P61020 RAB5B P61020.S125.p_RAB5B P61020_S125s _1_1_125_125 P61020 P61020 Ras-related protein Rab-5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26628.26628.3 13.06 13.06 1.301 2 1 1 0 636.3653 1827.1104 S125s TMT10 121 (R) QASPsIVIALAGNK (A) QAS(0.0)PS(0.99)IVIALAGNK K:TMT10,s:Phosphorylated S RAB5B 23934.6 8 6 2563.2 78.41 HUMAN 1 -3.8867 14.4729 LQRRRVSSPMDEVLA-p Q8N9B5;S889-p LQRRRVSSPMDEVLA 0.374713726213654 0.0393465291354279 -0.123333333333333 0.323666666666667 7.89365231613101 18.8554860883496 -0.123333333333333 0.323666666666667 0.162418228151653 0.0130152163334392 -1.61670656759278 3.63436118982566 Q8N9B5 JMY Q8N9B5.S889.p_JMY Q8N9B5_S889s _1_1_889_889 Q8N9B5 Q8N9B5|Q8N9B5-2 Junction-mediating and -regulatory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33791.33791.2 7.28 7.28 1.138 3 1 1 0 957.5013 1834.0396 S889s TMT10 887 (R) VSsPMDEVLASLK (R) VS(0.0)S(0.99)PMDEVLAS(0.0)LK K:TMT10,s:Phosphorylated S JMY 112127.7 7 10 1120.1 175.11 HUMAN 1 -7.8937 18.8555 LQRTRANSMEGLMPR-p O43306;S576-p LQRTRANSMEGLMPR 0.379981155951725 0.443227943427826 -0.131333333333333 0.0763333333333334 7.76336993375798 4.70545075811963 -0.131333333333333 0.0763333333333334 0.167364369829769 0.338419145218246 -1.59408286440776 1.04959135781375 O43306 ADCY6 O43306.S576.p_ADCY6 O43306_S576s _1_1_576_576 O43306 O43306|O43306-2 Adenylate cyclase type 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16873.17082.2 13.78 13.78 99 1 1 1 0 707.8247 1334.6758 S576s TMT10 574 (R) ANsMEGLMPR (W) ANS(1.0)MEGLMPR s:Phosphorylated S ADCY6 132381.8 8 4 1769.1 116.16 HUMAN 1 -7.7634 4.7055 LQSKTELTPEERAQK-p P46939;T2649-p LQSKTELTPEERAQK 0.516728693399709 0.693221429558504 0.141666666666667 0.0376666666666667 5.29445790698245 2.18431001170331 0.141666666666667 0.0376666666666667 0.295497771029968 0.604740422256663 1.15775568083253 0.549176719349126 P46939 UTRN P46939.T2649.p_UTRN P46939_T2649t _1_1_2649_2649 P46939 P46939-2|P46939-4|Q5T097 Utrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7779.7779.2 7.91 3.57 3.575 2 1 1 0 642.3084 1203.6418 T2649t TMT10 2646 (K) TELtPEER (A) T(0.0)ELT(0.99)PEER t:Phosphorylated T UTRN 396684.3 1 15 527.1 282.18 HUMAN 1 5.2945 2.1843 LQSLSKRTNLPPDHL-p Q9BXB4;T210-p LQSLSKRTNLPPDHL 0.82242509118488 0.0108886502667932 -0.0506666666666667 -0.572 1.63350688461017 27.5036480621491 -0.0506666666666667 -0.572 0.686513863041881 0.00177678628724026 -0.426017851215363 -5.69906305810824 Q9BXB4 OSBPL11 Q9BXB4.T210.p_OSBPL11 Q9BXB4_T210t_1_1_210_210 Q9BXB4 Q9BXB4 Oxysterol-binding protein-related protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28865.28865.4 8.45 4.88 8.449 4 1 1 0 1139.3334 4442.3913 T210t M223m M224m TMT10 203 (K) LQSLSKRtNLPPDHLVEVREmmSHAEGQQRDLIR (R) LQS(0.0)LS(0.0)KRT(0.99)NLPPDHLVEVREM(1.0)M(1.0)S(0.0)HAEGQQRDLIR K:TMT10,t:Phosphorylated T,m:Oxidized methionine OSBPL11 84383.5 1 9 1360.1 150.18 HUMAN 1 -1.6335 -27.5036 LQSRLSASETSLHRI-p Q15075;S356-p LQSRLSASETSLHRI 0.18292981861984 0.142796767402541 0.241 0.191 14.5021270111333 11.1388171863206 0.241 0.191 0.0354639657519071 0.0769339943731862 2.78558572655903 2.17945003914595 Q15075 EEA1 Q15075.S356.p_EEA1 Q15075_S356s _1_1_356_356 Q15075 Q15075 Early endosome antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8367.8367.2 14.28 6.07 2.177 4 1 1 0 705.3513 1329.7324 S356s TMT10 353 (R) LSAsETSLHR (I) LS(0.0)AS(0.99)ET(0.0)S(0.0)LHR s:Phosphorylated S EEA1 163432.8 3 7 1129.1 174.59 HUMAN 1 14.5021 11.1388 LQSTPLGSSSKSSPP-p J3KNL6;S69-p LQSTPLGSSSKSSPP 0.930920423214409 0.0818151649317092 -0.013 -0.195333333333333 0.617311259212099 14.4116439295623 -0.013 -0.195333333333333 0.867498782760601 0.0362105904968466 -0.174923338063651 -2.76709605311046 J3KNL6 SEC16A J3KNL6.S69.p_SEC16A J3KNL6_S69s _1_1_69_69 J3KNL6 J3KNL6|F1T0I1 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14222.14222.3 15.16 15.16 1.176 5 1 1 0 614.6655 1762.0111 S69s TMT10 60 (R) QALQSTPLGsSSK (S) QALQS(0.0)T(0.0)PLGS(0.99)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SEC16A 253486.5 3 3 15.1 1143.82 HUMAN 1 -0.6173 -14.4116 LQSVLGNSGYKHMIG-p Q9H8K7;S232-p LQSVLGNSGYKHMIG 0.198756774911252 0.045408253461249 -0.266 -0.238333333333333 13.6588039651396 17.9679558936104 -0.266 -0.238333333333333 0.0430645192644345 0.0159663046108491 -2.63048508569507 -3.4529625834681 Q9H8K7 C10orf88 Q9H8K7.S232.p_C10orf88 Q9H8K7_S232s _1_1_232_232 Q9H8K7 Q9H8K7 Uncharacterized protein C10orf88 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28937.28937.3 21.12 20.26 2.228 3 1 1 0 872.4496 2535.3641 S232s TMT10 217 (R) NCIPIGEQLQSVLGNsGYK (H) NCIPIGEQLQS(0.0)VLGNS(0.99)GY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C10orf88 49932.8 1 2 2780.1 70.89 HUMAN 1 -13.6588 -17.968 LQTKLRLSNRPAFMP-p P12814-4;S348-p LQTKLRLSNRPAFMP 0.337410296300458 0.0621776189360129 -0.201666666666667 0.374333333333333 8.78772112570723 16.0560012235394 -0.201666666666667 0.374333333333333 0.132198913984147 0.0247970420019065 -1.77161713217508 3.07676702916295 P12814 ACTN1 P12814.4.S348.p_ACTN1 P12814-4_S348s _1_1_348_348 P12814-4 P12814-4|P12814-3|P12814-2|H9KV75 Isoform 4 of Alpha-actinin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15539.15539.4 9.43 9.43 9.431 2 1 1 0 510.7657 1960.0748 S348s TMT10 345 (K) LRLsNRPAFMPSEGR (M) LRLS(0.99)NRPAFMPS(0.0)EGR s:Phosphorylated S ACTN1 107710.1 1 14 1097.2 178.17 HUMAN 1 -8.7877 16.056 LQTPECLSREGSPIP-p P85037;S441-p LQTPECLSREGSPIP 0.0332552830156115 0.00298089814036961 0.596 0.670333333333333 34.4647837522153 38.000934499339 0.596 0.670333333333333 0.000357702211160815 0.00015845521974987 7.91428055219222 9.26756499228554 P85037 FOXK1 P85037.S441.p_FOXK1 P85037_S441sS445s_2_2_441_445 P85037 P85037|P85037-2 Forkhead box protein K1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18907.18907.5 17.15 17.15 1.88 5 2 2 0 680.9197 3240.6359 S441s S445s TMT10 431 (R) SGGLQTPECLsREGsPIPHDPEFGSK (L) S(0.0)GGLQT(0.0)PECLS(0.99)REGS(0.99)PIPHDPEFGS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FOXK1 75912.4 4 18 686.1 243.66 HUMAN 2 34.4648 38.0009 LQTSKYFSPPPPARS-p Q8IWU2;S1450-p LQTSKYFSPPPPARS 0.221371400193213 0.634366954052162 -0.197 -0.0486666666666667 12.6129744345077 2.6885014283498 -0.197 -0.0486666666666667 0.0547901584699248 0.538455549329889 -2.44155522966388 -0.656313986163774 Q8IWU2 LMTK2 Q8IWU2.S1450.p_LMTK2 Q8IWU2_S1450s _1_1_1450_1450 Q8IWU2 Q8IWU2 Serine/threonine-protein kinase LMTK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14837.14837.2 7.51 7.51 7.513 2 1 1 0 670.834 1260.6938 S1450s TMT10 1448 (K) YFsPPPPAR (S) Y(0.0)FS(0.99)PPPPAR s:Phosphorylated S LMTK2 166095.5 2 7 1473.1 139.46 HUMAN 1 -12.613 -2.6885 LQTVDLVSQETGEKE-p Q9H2G2;S503-p LQTVDLVSQETGEKE 0.932495418439431 0.101911555742109 -0.015 0.213333333333333 0.599214773979545 13.1004310019077 -0.015 0.213333333333333 0.871121078741337 0.0489730215220828 -0.170085693166393 2.5277801739752 Q9H2G2 SLK Q9H2G2.S503.p_SLK Q9H2G2_S503s _1_1_503_503 Q9H2G2 Q9H2G2|Q9H2G2-2 STE20-like serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.31960.31960.4 9.8 9.8 2.603 5 1 1 0 808.1808 3149.7396 S503s TMT10 488 (K) SEEIKDTILQTVDLVsQETGEK (E) S(0.0)EEIKDT(0.0)ILQT(0.0)VDLVS(0.99)QET(0.0)GEK K:TMT10,s:Phosphorylated S SLK 143320 2 9 329.1 359.67 HUMAN 1 -0.5992 13.1004 LQVCKTHSGILGKGL-p O75592;S2167-p LQVCKTHSGILGKGL 0.996377054095677 0.241310751766194 0.000999999999999982 -0.193 0.0306068010843694 8.13325690853691 0.001 -0.193 0.992977298834532 0.153700156302035 0.00921565146021126 -1.65773482463671 O75592 MYCBP2 O75592.S2167.p_MYCBP2 O75592_S2167s _1_1_2167_2167 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10311.10311.3 7.54 7.54 2.105 2 1 1 0 450.9231 1270.7883 S2167s TMT10 2165 (K) THsGILGK (G) T(0.0)HS(0.99)GILGK K:TMT10,s:Phosphorylated S MYCBP2 518176.7 1 2 252.1 405.77 HUMAN 1 0.0306 -8.1333 LQVPGGDSDEDSKTP-p A6NGQ3;S6520-p LQVPGGDSDEDSKTP 0.413312492292849 0.576355627540859 0.133666666666667 -0.0586666666666667 7.07793202678404 3.22672265842575 0.133666666666667 -0.0586666666666667 0.195977763560466 0.475694066294196 1.47464802578368 -0.765985493479127 A6NGQ3 OBSCN A6NGQ3.S6520.p_OBSCN A6NGQ3_S6520s _1_1_6520_6520 A6NGQ3 A6NGQ3|Q5VST9-6|Q5VST9-2|Q5VST9-3 Obscurin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13286.13286.3 11.68 11.68 4.257 5 1 1 0 861.0888 2501.2884 S6520s TMT10 6513 (K) LQVPGGDsDEDSKTPSASPR (H) LQVPGGDS(0.99)DEDS(0.0)KT(0.0)PS(0.0)AS(0.0)PR K:TMT10,s:Phosphorylated S OBSCN 986850.9 1 1 6440.1 11.68 HUMAN 1 7.0779 -3.2267 LQVRRTFSLDTILSS-p Q9C073;S91-p LQVRRTFSLDTILSS 0.235431621682699 0.0989907816198809 -0.239333333333333 -0.225666666666667 12.0383224287505 13.2743681247625 -0.239333333333333 -0.225666666666667 0.0625414228038594 0.0470503856540289 -2.33913374571899 -2.55918643370282 Q9C073 FAM117A Q9C073.S91.p_FAM117A Q9C073_S91s _1_1_91_91 Q9C073 Q9C073 Protein FAM117A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.37460.37460.2 12.45 12.45 1.628 6 1 1 0 1089.0391 2097.1015 S91s Hydrogen 89 (R) TFsLDTILSSYLLGQWPR (D) T(0.0)FS(0.99)LDT(0.0)ILS(0.0)S(0.0)Y(0.0)LLGQWPR s:Phosphorylated S FAM117A 49059.4 3 3 640.1 255.25 HUMAN 1 -12.0383 -13.2744 LQVTSDLSL______-p O95466-2;S1103-p LQVTSDLSL______ 0.207422631751664 0.0610726036054524 0.232666666666667 -0.232333333333333 13.1982126219295 16.1721137480595 0.232666666666667 -0.232333333333333 0.0478827117390558 0.024142854952274 2.54684588425236 -3.09908898866388 O95466 FMNL1 O95466.2.S1103.p_FMNL1 O95466-2_S1103s _1_1_1103_1103 O95466-2 O95466-2|K7EK60 Isoform 2 of Formin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20763.20763.3 15.42 9.08 4.764 3 1 1 0 681.3738 1962.1334 S1103s TMT10 1089 (R) RRPPGPPLQVTSDLsL (-) RRPPGPPLQVT(0.0)S(0.0)DLS(0.99)L s:Phosphorylated S FMNL1 123091.5 1 4 2364.1 86.46 HUMAN 1 13.1982 -16.1721 LQYKKIVSWLEYESS-p Q02790;S298-p LQYKKIVSWLEYESS 0.191404434921086 0.29799006479051 -0.265666666666667 -0.137333333333333 14.0155354618631 6.94026700027696 -0.265666666666667 -0.137333333333333 0.0396685616701989 0.20228948091318 -2.69577127251684 -1.45015594206895 Q02790 FKBP4 Q02790.S298.p_FKBP4 Q02790_S298s _1_1_298_298 Q02790 Q02790 Peptidyl-prolyl cis-trans isomerase FKBP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.35252.35252.4 17.46 14.88 2.305 5 1 1 0 671.8275 2604.3234 S298s TMT10 296 (K) IVsWLEYESSFSNEEAQK (A) IVS(0.99)WLEY(0.0)ES(0.0)S(0.0)FS(0.0)NEEAQK K:TMT10,s:Phosphorylated S FKBP4 52088.9 3 9 706.1 239.22 HUMAN 1 -14.0155 -6.9403 LRAAEQYTPKAKYHG-p P49327;T2434-p LRAAEQYTPKAKYHG 0.292023616260519 0.0985793174091071 0.200666666666667 -0.305 10.0826845371587 13.3004656802979 0.200666666666667 -0.305 0.0981141275298328 0.0467684990209619 1.99607932741087 -2.56390706353013 P49327 FASN P49327.T2434.p_FASN P49327_T2434t _1_1_2434_2434 P49327 P49327 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7765.7765.2 10.35 7.11 3.003 2 1 1 0 723.3772 1365.7778 T2434t TMT10 2429 (R) AAEQYtPK (A) AAEQY(0.0)T(0.99)PK K:TMT10,t:Phosphorylated T FASN 276046.1 1 27 175.1 481.87 HUMAN 1 10.0827 -13.3005 LRANALLSPPRAPSK-p Q5D1E8;S344-p LRANALLSPPRAPSK 0.360685521242056 0.250571528738979 -0.213 -0.169333333333333 8.23315279954146 7.91920812141013 -0.213 -0.169333333333333 0.150205114276227 0.161465294061108 -1.67558400532082 -1.62063396351194 Q5D1E8 ZC3H12A Q5D1E8.S344.p_ZC3H12A Q5D1E8_S344s _1_1_344_344 Q5D1E8 Q5D1E8 Endoribonuclease ZC3H12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15870.15870.4 12.65 12.65 7.442 2 1 1 0 465.7685 1780.0845 S344s TMT10 339 (R) ANALLsPPRAPSK (D) ANALLS(0.99)PPRAPS(0.0)K K:TMT10,s:Phosphorylated S ZC3H12A 66325.5 3 3 2144.1 95.88 HUMAN 1 -8.2332 -7.9192 LRAQKEMSPSPPAAQ-p J3KQR7;S987-p LRAQKEMSPSPPAAQ 0.446047532766967 0.0802529084845163 0.131333333333333 0.228666666666667 6.46618082427237 14.5380123733328 0.131333333333333 0.228666666666667 0.225622245685555 0.035172137530016 1.36720778605536 2.7904931719043 J3KQR7 NotFound J3KQR7.S987.p_NotFound J3KQR7_S987sS989s_2_2_987_989 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18080.18080.2 15.52 15.52 4.578 4 2 2 0 1214.5456 2268.1492 S987s S989s TMT10 985 (K) EMsPsPPAAQDPGGTALVSAR (E) EMS(0.99)PS(0.99)PPAAQDPGGT(0.0)ALVS(0.0)AR s:Phosphorylated S CEP170B 172326.6 4 39 51.1 746.11 HUMAN 1 6.4662 14.538 LRARGQGSSPVAMQK-p P18206-2;S345-p LRARGQGSSPVAMQK 0.925465902873866 0.107326457741065 -0.015 0.173333333333333 0.66405482111513 12.8024984062099 -0.015 0.172653958567484 0.858211871752941 0.0524505636211795 -0.187348578082346 2.47420544821831 P18206 VCL P18206.2.S345.p_VCL P18206-2_S345s _1_1_345_345 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10670.10670.2 14.47 14.47 1.103 2 1 1 0 814.4169 1547.8616 S345s TMT10 342 (R) GQGsSPVAMQK (A) GQGS(0.99)S(0.0)PVAMQK K:TMT10,s:Phosphorylated S VCL 117290.9 6 5 319.1 365.38 HUMAN 1 -0.6641 12.8025 LRASYTPSPARSTHL-p Q96DF8;S421-p LRASYTPSPARSTHL 0.8567877084659 0.404856558300224 -0.0326666666666667 0.122666666666667 1.30689338697016 5.22599938582582 -0.0326666666666667 0.122666666666667 0.740134521793945 0.300192654677061 -0.349181524430256 1.14507663321456 Q96DF8 DGCR14 Q96DF8.S421.p_DGCR14 Q96DF8_T419tS421s_2_2_419_421 Q96DF8 Q96DF8 Protein DGCR14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7722.7722.2 8.04 8.04 1.979 4 2 2 0 669.7884 1178.6367 T419t S421s TMT10 416 (R) ASYtPsPAR (S) AS(0.0)Y(0.0)T(0.99)PS(0.99)PAR t:Phosphorylated T,s:Phosphorylated S DGCR14 52624.2 1 12 924.1 199.86 HUMAN 1 -1.3069 5.226 LRAVRQRSEFTLMAK-p Q13190;S92-p LRAVRQRSEFTLMAK 0.340665615596187 0.395819697019795 -0.131666666666667 -0.101333333333333 8.69651159770971 5.35068782075388 -0.131666666666667 -0.101333333333333 0.135004685114557 0.291696499847123 -1.7558285009578 -1.16770256499721 Q13190 STX5 Q13190.S92.p_STX5 Q13190_S92s _1_1_92_92 Q13190 Q13190|Q13190-4|Q13190-2|Q13190-3|E9PNU4 Syntaxin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16391.16391.3 7.78 7.78 1.134 2 1 1 0 583.644 1668.9507 S92s TMT10 90 (R) QRsEFTLMAK (R) QRS(0.99)EFT(0.0)LMAK K:TMT10,s:Phosphorylated S STX5 39785.9 1 2 3956.1 40.29 HUMAN 1 -8.6965 -5.3507 LRAVSGGSPERRTPW-p Q96HB5-4;S291-p LRAVSGGSPERRTPW 0.092306798909453 0.780759989388249 0.355 -0.0273333333333333 22.0310226387421 1.48766706615992 0.355 -0.0273333333333333 0.00626466332478853 0.709959039832421 4.32902698926949 -0.392054124607424 Q96HB5 CCDC120 Q96HB5.4.S291.p_CCDC120 Q96HB5-4_S291s _1_1_291_291 Q96HB5-4 Q96HB5-4|Q96HB5-3|Q96HB5-5|Q96HB5-2 Isoform 4 of Coiled-coil domain-containing protein 120 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4303.4513.2 12.9 8.59 3.41 2 1 1 0 584.7818 1088.5898 S291s TMT10 286 (R) AVSGGsPER (R) AVS(0.0)GGS(0.99)PER s:Phosphorylated S CCDC120 75538.7 4 2 1058.1 182.62 HUMAN 1 22.031 -1.4877 LRAYRPPSGEKWSKG-p P30414;S379-p LRAYRPPSGEKWSKG 0.948723601950881 0.0389426425925667 -0.00966666666666666 0.255 0.453345703294492 18.9265088221323 -0.00966666666666666 0.255 0.90087685571401 0.0128041017825799 -0.130510977567138 3.6490777562136 P30414 NKTR P30414.S379.p_NKTR P30414_S379s _1_1_379_379 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4776.4776.3 11.69 11.69 6.135 2 1 1 0 438.5537 1233.6789 S379s Hydrogen 374 (R) AYRPPsGEK (W) AY(0.0)RPPS(0.99)GEK K:TMT10-Lys-Only,s:Phosphorylated S NKTR 166700.6 6 5 202.1 449.45 HUMAN 1 -0.4533 18.9265 LRCNLACTPPRHLHV-p P46379-3;T344-p LRCNLACTPPRHLHV 0.466272747529073 0.160789447992372 0.104 -0.208333333333333 6.11753209336619 10.4404788552581 0.104 -0.208333333333333 0.244481944257965 0.0903549842374213 1.30547401255804 -2.0574778457501 P46379 BAG6 P46379.3.T344.p_BAG6 P46379-3_T344t _1_1_344_344 P46379-3 P46379-3|A0A0G2JK23|P46379-2|A0A024RCR6|P46379-5|A0A0G2JL47|P46379-4 Isoform 3 of Large proline-rich protein BAG6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8102.8102.2 9.58 9.58 99 1 1 1 0 699.3171 1317.6605 T344t TMT10 339 (R) CNLACtPPR (H) CNLACT(1.0)PPR C:Carbamidomethylation,t:Phosphorylated T BAG6 122796.4 4 4 590.1 264.42 HUMAN 1 6.1175 -10.4405 LRDAEPPSPTPAGPP-p O43306;S54-p LRDAEPPSPTPAGPP 0.436274564480205 0.834628060383534 0.113666666666667 0.03 6.63117318727472 1.10062356719791 0.113666666666667 0.0300000000000001 0.217211433255895 0.776135669785262 1.39628465807566 0.298901908642041 O43306 ADCY6 O43306.S54.p_ADCY6 O43306_S54s _1_1_54_54 O43306 O43306|O43306-2 Adenylate cyclase type 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20497.20497.4 17.62 14.04 1.109 2 1 1 0 747.3473 2906.4093 S54s TMT10 49 (R) DAEPPsPTPAGPPRCPWQDDAFIR (R) DAEPPS(0.99)PT(0.0)PAGPPRCPWQDDAFIR C:Carbamidomethylation,s:Phosphorylated S ADCY6 132381.8 8 3 1769.1 116.16 HUMAN 1 6.6312 1.1006 LRDSRAQSPVSGPNV-p Q5THJ4;S1042-p LRDSRAQSPVSGPNV 0.622172474425454 0.48166775463794 0.078 0.094 3.8297634066789 4.2355315400116 0.078 0.094 0.41402222915329 0.37709158933992 0.884445604465245 0.961722327748219 Q5THJ4 VPS13D Q5THJ4.S1042.p_VPS13D Q5THJ4_S1042s _1_1_1042_1042 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15361.15361.3 23.08 23.08 3.134 4 1 1 0 843.7493 2449.2633 S1042s TMT10 1040 (R) AQsPVSGPNVAHLTDGATLNDR (S) AQS(0.99)PVS(0.0)GPNVAHLT(0.0)DGAT(0.0)LNDR s:Phosphorylated S VPS13D 495672.3 1 6 124.1 545.31 HUMAN 1 3.8298 4.2355 LRDSRGPSVEKLSHR-p A0A0B4J291;S85-p LRDSRGPSVEKLSHR 0.321778492316393 0.766171370456624 -0.139 0.0296666666666667 9.21701112304195 1.5976995911573 -0.138333690133494 0.0296666666666667 0.119756442879403 0.692197523044773 -1.84593522957776 0.417699047957367 A0A0B4J291 NotFound A0A0B4J291.S85.p_NotFound A0A0B4J291_S85s _1_1_85_85 A0A0B4J291 A0A0B4J291|Q8N8U2 Chromodomain Y-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5855.5855.3 9.47 7.27 8.321 2 1 1 0 504.933 1432.816 S85s TMT10 80 (R) DSRGPsVEK (L) DS(0.0)RGPS(0.99)VEK K:TMT10,s:Phosphorylated S CDYL2 57241.1 4 1 4848.1 25.91 HUMAN 1 -9.217 1.5977 LRDSRGSSFEMTDDD-p Q7L2E3-2;S254-p LRDSRGSSFEMTDDD 0.593841391509006 0.737768780317944 -0.089 0.0536666666666667 4.17404607801221 1.82137906894517 -0.089 0.0536666666666667 0.382468253069923 0.657449036287325 -0.950255862577742 0.46881875961725 Q7L2E3 DHX30 Q7L2E3.2.S254.p_DHX30 Q7L2E3-2_S254s _1_1_254_254 Q7L2E3-2 Q7L2E3-2|H7BXY3|Q7L2E3-3 Isoform 2 of Putative ATP-dependent RNA helicase DHX30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15439.15439.2 10.39 10.39 1.469 4 1 1 0 920.3857 1759.8006 S254s TMT10 252 (R) GSsFEMTDDDSAIR (A) GS(0.0)S(0.99)FEMT(0.0)DDDS(0.0)AIR s:Phosphorylated S DHX30 137139.9 2 1 4896.1 25.35 HUMAN 1 -4.174 1.8214 LRDTKLLSPLRDTPP-p P51825-2;S757-p LRDTKLLSPLRDTPP 0.660088859116461 0.0284992049800838 0.063 -0.288333333333333 3.38003191574549 20.9294720180534 0.063 -0.288333333333333 0.459194638261859 0.00807333173662785 0.796598391482041 -4.07728204834535 P51825 AFF1 P51825.2.S757.p_AFF1 P51825-2_S757s _1_1_757_757 P51825-2 P51825-2|P51825-3|F5GXF9 Isoform 2 of AF4/FMR2 family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27577.27577.3 15.68 15.68 1.638 3 1 1 0 810.7924 2350.3932 S757s TMT10 755 (K) LLsPLRDTPPPQSLMVK (I) LLS(0.99)PLRDT(0.0)PPPQS(0.0)LMVK K:TMT10,s:Phosphorylated S AFF1 133180 5 6 1199.1 167.15 HUMAN 1 3.38 -20.9295 LRDTRRLSFLVSYIA-p P47897;S70-p LRDTRRLSFLVSYIA 0.414715625274144 0.20289012670065 -0.117333333333333 0.227333333333333 7.05366946953532 9.11418446702208 -0.117333333333333 0.227333333333333 0.197075688756698 0.122625715180555 -1.47040453795184 1.82746416079132 P47897 QARS P47897.S70.p_QARS P47897_S70s _1_1_70_70 P47897 P47897|A0A0U1RQU2 Glutamine--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30883.30883.3 15.59 15.59 3.323 4 1 1 0 760.454 2199.3832 S70s TMT10 68 (R) RLsFLVSYIASKK (I) RLS(0.99)FLVS(0.0)Y(0.0)IAS(0.0)KK K:TMT10,s:Phosphorylated S QARS 88710 11 3 2312.1 88.39 HUMAN 1 -7.0537 9.1142 LREAEEESDHN____-p Q04637-9;S1603-p LREAEEESDHN____ 0.294575702798297 0.661428628109368 -0.2 -0.069 10.0176962317943 2.45795586460667 -0.2 -0.069 0.0995933582405194 0.56781179993508 -1.9847850678455 -0.607913228324103 Q04637 EIF4G1 Q04637.9.S1603.p_EIF4G1 Q04637-9_S1603s _1_1_1603_1603 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1|Q04637-4|E7EX73|Q04637-5 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11482.11914.3 12.67 12.67 99 1 1 1 0 608.5992 1743.8136 S1603s TMT10 1595 (K) WLREAEEEsDHN (-) WLREAEEES(1.0)DHN s:Phosphorylated S EIF4G1 176975.4 4 32 107.1 585.61 HUMAN 1 -10.0177 -2.458 LREASAESDVGKSSE-p P28290;S644-p LREASAESDVGKSSE 0.383214091299175 0.0500384684317076 0.228666666666667 -0.235 7.71019506307544 17.3871442324679 0.228666666666667 -0.235 0.16942617010876 0.0182509542629137 1.58484321216718 -3.33666424763136 P28290 SSFA2 P28290.S644.p_SSFA2 P28290_S641sS644s_2_2_641_644 P28290 P28290|P28290-3|E9PHV5|P28290-2|E7EUL7 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18395.18395.4 19.09 19.09 5.632 9 2 2 0 875.6588 3339.6745 S641s S644s Hydrogen 639 (R) EAsAEsDVGKSSESEFTQYTTHHILK (S) EAS(0.99)AES(0.99)DVGKS(0.0)S(0.0)ES(0.0)EFT(0.0)QY(0.0)T(0.0)T(0.0)HHILK K:TMT10-Lys-Only,s:Phosphorylated S SSFA2 139638.7 2 36 73.1 652.35 HUMAN 1 7.7102 -17.3871 LREAYVPSKQRDLKI-p Q9BR76;S399-p LREAYVPSKQRDLKI 0.397533036246793 0.0831880479024001 -0.217333333333333 -0.262666666666667 7.39471617447935 14.2958961614928 -0.217333333333333 -0.262666666666667 0.182191613732614 0.0371886474912639 -1.52994449784198 -2.74571971744291 Q9BR76 CORO1B Q9BR76.S399.p_CORO1B Q9BR76_S399s _1_1_399_399 Q9BR76 Q9BR76 Coronin-1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11764.11764.2 9.86 9.86 5.722 2 1 1 0 666.3537 1251.7349 S399s TMT10 394 (R) EAYVPsK (Q) EAY(0.0)VPS(0.99)K K:TMT10,s:Phosphorylated S CORO1B 54918.3 1 2 3992.1 39.51 HUMAN 1 -7.3947 -14.2959 LRELLKNSAKNHLDE-p P32019;S945-p LRELLKNSAKNHLDE 0.662291570491154 0.0441211842132773 -0.152666666666667 0.286333333333333 3.35272864055767 18.1518293285637 -0.152666666666667 0.286333333333333 0.4620906020193 0.0153044267517444 -0.79118845883989 3.49017027818668 P32019 INPP5B P32019.S945.p_INPP5B P32019_S945s_1_1_945_945 P32019 P32019|P32019-2|P32019-3 Type II inositol 1,4,5-trisphosphate 5-phosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29748.29748.5 7.09 4.62 6.769 3 1 1 0 786.0227 3845.1753 S945s N953n TMT10 944 (K) NsAKNHLDEnILASIFGSLLLRNPAGHQK (L) N(0.0)S(0.99)AKN(0.0)HLDEN(0.99)ILAS(0.0)IFGS(0.0)LLLRN(0.0)PAGHQK K:TMT10,s:Phosphorylated S,n:Deamidated INPP5B 114105.3 13 1 7264.1 7.09 HUMAN 1 -3.3527 18.1518 LRELLSISSESLQAR-p Q9BRV8-2;S191-p LRELLSISSESLQAR 0.693940595790396 0.711086873446107 0.0836666666666667 -0.0653333333333333 2.97686585707581 2.03625885586856 0.0836666666666667 -0.0653333333333333 0.503864097729343 0.625711467482812 0.715709564531816 -0.516756534312373 Q9BRV8 SIKE1 Q9BRV8.2.S191.p_SIKE1 Q9BRV8-2_S191s _1_1_191_191 Q9BRV8-2 Q9BRV8-2 Isoform 2 of Suppressor of IKBKE 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21799.21799.3 14.22 15.61 1.119 4 1 1 0 581.3041 1661.9271 S191s TMT10 186 (R) ELLSIsSESLQAR (K) ELLS(0.0)IS(0.99)S(0.0)ES(0.0)LQAR s:Phosphorylated S SIKE1 24431.4 1 1 4751.1 27.04 HUMAN 1 2.9769 -2.0363 LRENSFGSPLEFRNS-p Q9UQ35;S1329-p LRENSFGSPLEFRNS 0.980051969422018 0.376810015444108 0.00533333333333334 0.148 0.173839574240978 5.62892498716959 0.00533333333333333 0.148 0.960762497820129 0.273594587350841 0.0515161545766617 1.21789258635591 Q9UQ35 SRRM2 Q9UQ35.S1329.p_SRRM2 Q9UQ35_S1329s _1_1_1329_1329 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20384.20384.2 13.25 13.25 3.808 2 1 1 0 796.3712 1511.7692 S1329s TMT10 1324 (R) ENSFGsPLEFR (N) ENS(0.0)FGS(0.99)PLEFR s:Phosphorylated S SRRM2 300351.7 3 75 2.1 3310.34 HUMAN 1 0.1738 5.6289 LREPQEDSQKDLEND-p Q8NFQ8;S13-p LREPQEDSQKDLEND 0.175973502111451 0.0212539928964931 0.230333333333333 0.311 15.0043572657293 22.8771105114712 0.230333333333333 0.311 0.0315910654591297 0.00515571555367807 2.87926842086835 4.52040852757919 Q8NFQ8 TOR1AIP2 Q8NFQ8.S13.p_TOR1AIP2 Q8NFQ8_S13s _1_1_13_13 Q8NFQ8 Q8NFQ8 Torsin-1A-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25733.25733.5 24.87 24.21 1.179 9 1 1 0 1193.3783 5882.8514 S13s Acetyl 2 (M) ADSGLREPQEDsQKDLENDPSVNSQAQETTIIASNAEEAEILHSACGLSK (D) ADS(0.0)GLREPQEDS(0.99)QKDLENDPS(0.0)VNS(0.0)QAQET(0.0)T(0.0)IIAS(0.0)NAEEAEILHS(0.0)ACGLS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TOR1AIP2 51490.6 1 1 2317.1 88.08 HUMAN 1 15.0044 22.8771 LRFDIEGSDEADGSK-p P06400;S882-p LRFDIEGSDEADGSK 0.953174502016344 0.0120753546477919 -0.01 -0.41 0.410998191909942 26.790123023119 -0.01 -0.41 0.909704160213335 0.00209405313651625 -0.118820338152337 -5.50440090154132 P06400 RB1 P06400.S882.p_RB1 P06400_S882s _1_1_882_882 P06400 P06400 Retinoblastoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18656.18656.3 11.28 11.28 5.359 2 1 1 0 726.3553 2097.0864 S882s TMT10 875 (K) LRFDIEGsDEADGSK (H) LRFDIEGS(0.99)DEADGS(0.0)K K:TMT10,s:Phosphorylated S RB1 107013.3 1 14 155.1 502.88 HUMAN 1 -0.411 -26.7901 LRFEKQPSEEDEWAV-p A7MCY6;S521-p LRFEKQPSEEDEWAV 0.352523805432325 0.375197544245325 0.163333333333333 0.101666666666667 8.41014015056802 5.65153407368385 0.163333333333333 0.101666666666667 0.144206881397191 0.272173972855311 1.70624516106508 1.22195394644673 A7MCY6 TBKBP1 A7MCY6.S521.p_TBKBP1 A7MCY6_S521s _1_1_521_521 A7MCY6 A7MCY6 TANK-binding kinase 1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21310.21310.3 16.54 13.34 4.113 5 1 1 0 1074.5159 3141.5578 S521s Hydrogen 516 (R) FEKQPsEEDEWAVPTSPPSPEVGTIR (C) FEKQPS(0.99)EEDEWAVPT(0.0)S(0.0)PPS(0.0)PEVGT(0.0)IR K:TMT10-Lys-Only,s:Phosphorylated S TBKBP1 68613.7 1 4 2261.1 90.94 HUMAN 1 8.4101 5.6515 LRFKRRWSEDCRLEG-p P50548;S489-p LRFKRRWSEDCRLEG 0.0350618685416583 0.343216113415363 -0.670666666666667 -0.117666666666667 33.9888362223643 6.1528149912395 -0.670666666666667 -0.117666666666667 0.000399131843274764 0.242503773505599 -7.74372931419003 -1.31142149743683 P50548 ERF P50548.S489.p_ERF P50548_S489s _1_1_489_489 P50548 P50548|P50548-2 ETS domain-containing transcription factor ERF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11494.11494.5 17.95 17.95 99 1 1 1 0 753.1645 3681.8283 S489s TMT10 486 (K) RRWsEDCRLEGGGGPAGGFEDEGEDKK (V) RRWS(1.0)EDCRLEGGGGPAGGFEDEGEDKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ERF 59044.2 1 8 1246.1 162.15 HUMAN 1 -33.9888 -6.1528 LRGARDRTPPLLYRD-p Q96T37;T568-p LRGARDRTPPLLYRD 0.472747504381845 0.961746276299718 0.0986666666666667 -0.00599999999999995 5.99639135717676 0.242271399979474 0.0986666666666667 -0.00599999999999993 0.25139744773646 0.945742400043918 1.28392070344506 -0.071264073671689 Q96T37 RBM15 Q96T37.T568.p_RBM15 Q96T37_T568t _1_1_568_568 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19964.19964.4 15.26 11.74 2.156 4 1 1 0 953.9837 3732.9448 T568t TMT10 566 (R) DRtPPLLYRDRDRDLYPDSDWVPPPPPVR (E) DRT(0.99)PPLLY(0.0)RDRDRDLY(0.0)PDS(0.0)DWVPPPPPVR t:Phosphorylated T RBM15 107414.9 23 15 55.1 724.11 HUMAN 1 5.9964 -0.2423 LRGKRSPTPGKGPAD-p E9PGC8;T2869-p LRGKRSPTPGKGPAD 0.636657897799904 0.0235797615702805 -0.115666666666667 -0.506 3.65844990160972 22.1946242922989 -0.115666666666667 -0.506 0.430680302916047 0.00603305897599087 -0.851251720659221 -4.36191208279557 E9PGC8 NotFound E9PGC8.T2869.p_NotFound E9PGC8_S2867sT2869t_2_2_2867_2869 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4230.4230.5 7.59 5 99 2 2 2 0 455.0451 2111.2652 S2867s T2869t TMT10 2864 (R) GKRsPtPGKGPADR (A) GKRS(1.0)PT(1.0)PGKGPADR K:TMT10,s:Phosphorylated S,t:Phosphorylated T MAP1A 332906.7 1 56 20.1 1016.98 HUMAN 1 -3.6584 -22.1946 LRGKRTPSPLILDQN-p Q9UK58;S166-p LRGKRTPSPLILDQN 0.0721955710812666 0.46990215351433 0.370333333333333 0.0923333333333334 24.5700971510827 4.37165436627923 0.369693153265514 0.0923333333333334 0.00349132505344749 0.365455551411869 4.93571316408474 0.987358951412967 Q9UK58 CCNL1 Q9UK58.S166.p_CCNL1 Q9UK58_S166s _1_1_166_166 Q9UK58 Q9UK58|Q9UK58-6 Cyclin-L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25435.25435.3 15.33 15.33 1.279 4 1 1 0 752.4078 2175.2425 S166s TMT10 164 (R) TPsPLILDQNYINTK (N) T(0.0)PS(0.99)PLILDQNY(0.0)INT(0.0)K K:TMT10,s:Phosphorylated S CCNL1 60031.9 1 1 883.1 206.76 HUMAN 1 24.5701 4.3717 LRGLLTDSPAATVLA-p Q86UU1;S334-p LRGLLTDSPAATVLA 0.900634016240357 0.0666983545483172 -0.027 -0.354 0.890619440156238 15.6393375632381 -0.027 -0.354 0.814588089921787 0.0272939407017979 -0.246211843370676 -2.99718274602484 Q86UU1 PHLDB1 Q86UU1.S334.p_PHLDB1 Q86UU1_S334s _1_1_334_334 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26329.26329.3 15.24 15.24 2.593 3 1 1 0 632.0013 1814.0221 S334s TMT10 329 (R) GLLTDsPAATVLAEAR (R) GLLT(0.0)DS(0.99)PAAT(0.0)VLAEAR s:Phosphorylated S PHLDB1 152129.1 1 3 99.1 600.41 HUMAN 1 -0.8906 -15.6393 LRGNVVPSPLPTRRT-p Q9Y2V2;S41-p LRGNVVPSPLPTRRT 0.879599635286023 0.0140356861537731 0.0416666666666667 0.412333333333333 1.09672955647054 25.6998957842955 0.0416666666666667 0.412333333333333 0.776831887694414 0.00269159939225879 0.297969067272442 5.21650132839825 Q9Y2V2 CARHSP1 Q9Y2V2.S41.p_CARHSP1 Q9Y2V2_S41s _1_1_41_41 Q9Y2V2 Q9Y2V2|I3L3X8 Calcium-regulated heat-stable protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14912.14912.2 12.49 12.49 4.138 2 1 1 0 723.3893 1365.8052 S41s TMT10 36 (R) GNVVPsPLPTR (R) GNVVPS(0.99)PLPT(0.0)R s:Phosphorylated S CARHSP1 16120 13 5 1307.1 155.77 HUMAN 1 1.0967 25.6999 LRGQSTDSLPQTICR-p Q96NE9;S525-p LRGQSTDSLPQTICR 0.283177951218012 0.506361080976326 0.198333333333333 0.0653333333333333 10.353783779174 3.95993012524869 0.198333333333333 0.0653333333333333 0.092176798928909 0.401797275416189 2.04324744536907 0.909309553282104 Q96NE9 FRMD6 Q96NE9.S525.p_FRMD6 Q96NE9_S525s _1_1_525_525 Q96NE9 Q96NE9|Q96NE9-2|G3V4T7|Q96NE9-3 FERM domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11805.11805.3 11.03 7.2 2.338 4 1 1 0 681.0084 1961.0436 S525s TMT10 518 (K) LRGQSTDsLPQTICR (K) LRGQS(0.0)T(0.0)DS(0.99)LPQT(0.0)ICR C:Carbamidomethylation,s:Phosphorylated S FRMD6 72898.5 2 4 1456.1 140.48 HUMAN 1 10.3538 3.9599 LRGRGVGSPEPGPTA-p Q9C0B5;S621-p LRGRGVGSPEPGPTA 0.880959558381171 0.0106932352965192 0.023 -0.435333333333333 1.08144185248071 27.6335486732453 0.023 -0.435333333333333 0.77957125083308 0.0017244282647639 0.294184319717086 -5.73505141949717 Q9C0B5 ZDHHC5 Q9C0B5.S621.p_ZDHHC5 Q9C0B5_S621s _1_1_621_621 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16495.16495.3 15.77 15.77 6.928 3 1 1 0 621.9784 1783.954 S621s TMT10 618 (R) GVGsPEPGPTAPYLGR (S) GVGS(0.99)PEPGPT(0.0)APY(0.0)LGR s:Phosphorylated S ZDHHC5 78285 4 18 134.1 530.74 HUMAN 1 1.0814 -27.6335 LRGRRNPSPDHSYKR-p Q15696;S384-p LRGRRNPSPDHSYKR 0.373949739230052 0.490623322344547 0.131 0.0983333333333334 7.90859831176426 4.13294534606873 0.131 0.0983333333333334 0.161860235830185 0.38610503528272 1.61930076518117 0.942294906523198 Q15696 ZRSR2 Q15696.S384.p_ZRSR2 Q15696_S384s _1_1_384_384 Q15696 Q15696 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3351.3351.4 11.59 11.59 11.586 3 1 1 0 417.207 1585.8397 S384s Hydrogen 381 (R) RNPsPDHSYKR (N) RNPS(0.99)PDHS(0.0)Y(0.0)KR K:TMT10-Lys-Only,s:Phosphorylated S ZRSR2 58671.2 8 3 2429.1 83.76 HUMAN 1 7.9086 4.1329 LRGSDALSETSSVSH-p Q6P996;S718-p LRGSDALSETSSVSH 0.214734983572386 0.495492808509443 -0.207 -0.0696666666666667 12.8756078957127 4.07814199577871 -0.207 -0.0696666666666667 0.0515749968866434 0.391008141618713 -2.48867610883315 -0.931877231757489 Q6P996 PDXDC1 Q6P996.S718.p_PDXDC1 Q6P996_S718s _1_1_718_718 Q6P996 H3BND4|Q6P996|Q6P996-3|Q6P996-5|Q6P996-4 Pyridoxal-dependent decarboxylase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18592.18592.3 19.5 19.5 1.283 6 1 1 0 771.6959 2233.1033 S718s Hydrogen 713 (R) GSDALsETSSVSHIEDLEK (V) GS(0.0)DALS(0.99)ET(0.0)S(0.0)S(0.0)VS(0.0)HIEDLEK K:TMT10-Lys-Only,s:Phosphorylated S PDXDC1 87618.2 5 13 600.1 263.32 HUMAN 1 -12.8756 -4.0781 LRHGGPQYCRSDPDV-p O14684;Y58-p LRHGGPQYCRSDPDV 0.867635849079879 0.00996216492251271 -0.0486666666666667 -0.419333333333333 1.20204780282363 28.1263060222222 -0.0486666666666667 -0.419333333333333 0.758219971793229 0.00153946350477457 -0.323819348480469 -5.87314105532317 O14684 PTGES O14684.Y58.p_PTGES O14684_Y58y _1_1_58_58 O14684 O14684 Prostaglandin E synthase GG20160819_MSz_CCLE_T4D7_pY_Injection_02.3937.3937.2 12.81 12.81 99 1 1 1 0 642.2817 1203.589 Y58y TMT10 53 (R) HGGPQyCR (S) HGGPQY(1.0)CR C:Carbamidomethylation,y:Phosphorylated Y PTGES 17330.2 1 1 275.1 12.81 HUMAN 1 -1.202 -28.1263 LRHIKLHSGEKPFKC-p Q9H2S9;S210-p LRHIKLHSGEKPFKC 0.259441883712572 0.00196312166393669 -0.18 -0.825333333333333 11.1165487523579 42.3045598526674 -0.18 -0.825333333333333 0.0773294862280771 5.88225726428238e-05 -2.17654036979617 -11.2181041783886 Q9H2S9 IKZF4 Q9H2S9.S210.p_IKZF4 Q9H2S9_S210s _1_1_210_210 Q9H2S9 P17027-2|Q9H2S9-2|F8VPL6|B4DWF2|Q9UKS7|Q13422|Q9UKS7-2|Q13422-7|Q9UKS7-7|Q9UKS7-4|Q13422-2|Q13422-3|Q8NCK3-2|Q9NZL3|Q9UK13|A0A087WT08|A0A0A0MT14|A0A0A0MSL2|Q13422-4|Q9UKS7-6|Q13422-8 Zinc finger protein Eos HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10931.10931.3 9.59 9.59 99 1 1 1 0 604.0118 1730.0568 S210s TMT10 208 (K) LHsGEKPFK (C) LHS(1.0)GEKPFK K:TMT10,s:Phosphorylated S IKZF4 65303 1 10 2223.1 92.84 HUMAN 1 -11.1165 -42.3046 LRHKLTVSDGESGEE-p P46100;S1348-p LRHKLTVSDGESGEE 0.806595725807555 0.751582701181189 0.038 -0.0306666666666666 1.79711983887082 1.71336827202638 0.038 -0.0306666666666666 0.661131753072802 0.674005084589 0.463388804485184 -0.444297283467224 P46100 ATRX P46100.S1348.p_ATRX P46100_S1348s _1_1_1348_1348 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8228.8228.5 15.36 15.36 1.1 3 1 1 0 528.8942 2560.4752 S1348s TMT10 1343 (R) HKLTVsDGESGEEKK (T) HKLT(0.0)VS(0.99)DGES(0.0)GEEKK K:TMT10,s:Phosphorylated S ATRX 285034.2 5 36 18.1 1035.36 HUMAN 1 1.7971 -1.7134 LRHLLANSPKVKQTD-p Q9NRR4;S807-p LRHLLANSPKVKQTD 0.848084418990848 0.0245137008897857 -0.0486666666666667 -0.625333333333333 1.38384452500296 21.9258239793738 -0.0486666666666667 -0.625333333333334 0.727135833750134 0.0064182643734079 -0.367571311545511 -4.3004598848938 Q9NRR4 DROSHA Q9NRR4.S807.p_DROSHA Q9NRR4_S807s _1_1_807_807 Q9NRR4 Q9NRR4|Q9NRR4-4|Q9NRR4-2|Q9NRR4-3 Ribonuclease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6160.6160.2 8.8 8.8 99 1 1 1 0 594.8216 1108.6676 S807s Hydrogen 802 (R) HLLANsPK (V) HLLANS(1.0)PK K:TMT10-Lys-Only,s:Phosphorylated S DROSHA 160910.7 2 6 1630.1 125.18 HUMAN 1 -1.3838 -21.9258 LRHNGSLSPGLEARD-p Q9C0C2;S1385-p LRHNGSLSPGLEARD 0.453366143163081 0.859185077156491 0.103 -0.0233333333333333 6.33772736392002 0.928673375538243 0.103 -0.0233333333333333 0.23239525881927 0.807481651230806 1.34451147188968 -0.255864974108637 Q9C0C2 TNKS1BP1 Q9C0C2.S1385.p_TNKS1BP1 Q9C0C2_S1385s_1_1_1385_1385 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13648.13648.4 17.39 17.39 3.193 2 1 1 0 558.0256 2148.1359 N1381n S1385s TMT10 1380 (R) HnGSLsPGLEARDPLEAR (E) HN(1.0)GS(0.0)LS(0.99)PGLEARDPLEAR n:Deamidated,s:Phosphorylated S TNKS1BP1 182819.3 11 58 4.1 2105.7 HUMAN 1 6.3377 -0.9287 LRHQIIHTGAKPFQC-p Q6ZMY9;T200-p LRHQIIHTGAKPFQC 0.569246194913171 0.0761209066341781 -0.106 0.233333333333333 4.50177759092297 14.8441729604056 -0.106 0.233333333333333 0.354668191901628 0.0327780190995814 -1.01190947437247 2.84744201214724 Q6ZMY9 ZNF517 Q6ZMY9.T200.p_ZNF517 Q6ZMY9_T200t_1_1_200_200 Q6ZMY9 Q6ZMY9 Zinc finger protein 517 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21526.21526.5 9.84 7.6 8.956 3 1 1 0 556.3111 2696.5877 N189n T200t TMT10 185 (K) AFRYnSLLLRHQIIHtGAK (P) AFRY(0.0)N(1.0)S(0.0)LLLRHQIIHT(0.99)GAK K:TMT10,n:Deamidated,t:Phosphorylated T ZNF517 56193 1 1 6744.1 9.84 HUMAN 1 -4.5018 14.8442 LRHQRIHTGERPYKC-p O14978;T513-p LRHQRIHTGERPYKC 0.295243174589512 0.00580592124960547 -0.169 -1.30066666666667 9.97782410356022 32.322448302869 -0.169 -1.30066666666667 0.100511924765636 0.000585807826600938 -1.97785799146413 -7.15854013648072 O14978 ZNF263 O14978.T513.p_ZNF263 O14978_T513t _1_1_513_513 O14978 Q8NB50|Q8NB50-3|Q9P2J8|Q86UE3|M0QY24|Q99676|Q9P2J8-2|E7EQD3|Q8NB50-2|Q8N8Z8-2|Q16587|Q86T29|M0QY62|M0QZ59|Q16587-3|O14978|Q86T29-2|Q9HCX3|O43309|A0A0A0MTT2|Q15776|Q16587-2|Q16587-4|Q68DY1|Q49AA0|Q96JC4|Q96HQ0-5|Q8TBZ5|A0A087X1I5|Q9BR84|Q9Y2P0|Q8WV37|Q68DY9|Q6NX45|Q96HQ0-2|Q96HQ0-6|Q8N9Z0|Q8WV37-2|Q68DY1-2|Q6ZS27-3|Q68DY9-3|A6NNZ3|Q96NJ6|Q96HQ0-4|Q96HQ0-3|A6NP11|F8WEZ9|Q8N9Z0-2|A0A087WTB1|A0A087WWK0|A0A087WTN2|P0CB33|E7ETH6|A0A1W2PQL4|Q68DY9-2|Q8WV37-3|B4DI05|Q6ZS27-2|Q5EBM4|Q5EBM4-2|Q9H4Q4 Zinc finger protein 263 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6559.6559.4 11.58 11.58 7.962 2 1 1 0 410.4739 1558.9106 T513t TMT10 511 (R) IHtGERPYK (C) IHT(0.99)GERPY(0.0)K K:TMT10,t:Phosphorylated T ZNF263 78894.9 2 21 240.11 415.72 HUMAN 1 -9.9778 -32.3224 LRHSAPPSPAAGEPR-p Q6ZSY5;S18-p LRHSAPPSPAAGEPR 0.260789944862731 0.415215463568943 0.411 -0.120666666666667 11.0560111556752 5.07769118748017 0.411 -0.120666666666667 0.0784149526289155 0.310621048446266 2.16592493443655 -1.11804759045086 Q6ZSY5 PPP1R3F Q6ZSY5.S18.p_PPP1R3F Q6ZSY5_S14sS18s_2_2_14_18 Q6ZSY5 Q6ZSY5 Protein phosphatase 1 regulatory subunit 3F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11466.11466.4 7.84 7.84 7.835 3 2 2 0 656.5704 2463.3306 S14s S18s TMT10 4 (R) TAPVEPPLRHsAPPsPAAGEPR (T) T(0.0)APVEPPLRHS(0.99)APPS(0.99)PAAGEPR s:Phosphorylated S PPP1R3F 83423.7 2 2 4285.1 34.24 HUMAN 1 11.056 -5.0777 LRHWNTRSLDIKEPE-p Q8IWB9;S538-p LRHWNTRSLDIKEPE 0.222515442905233 0.0217064462056329 -0.237666666666667 -0.413 12.5563643583668 22.7440050395452 -0.237666666666667 -0.413 0.0555090205292717 0.00531617778185317 -2.43142494702235 -4.48921423229625 Q8IWB9 TEX2 Q8IWB9.S538.p_TEX2 Q8IWB9_S538s _1_1_538_538 Q8IWB9 Q8IWB9|A0A087WVA8 Testis-expressed protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21040.21040.3 13.66 12.14 99 1 1 1 0 608.3497 1743.0668 S538s Hydrogen 538 (R) sLDIKEPEILK (G) S(1.0)LDIKEPEILK K:TMT10-Lys-Only,s:Phosphorylated S TEX2 125928 2 13 300.1 376.78 HUMAN 1 -12.5564 -22.744 LRIDDIVSGHKKKGD-p P49368;S524-p LRIDDIVSGHKKKGD 0.695590228752993 0.861834791928945 -0.0656666666666667 0.0176666666666667 2.96044111291122 0.911071636430406 -0.0656666666666667 0.0176666666666667 0.505773288000574 0.810760975136452 -0.712365926663362 0.251396005625095 P49368 CCT3 P49368.S524.p_CCT3 P49368_S524s _1_1_524_524 P49368 P49368|P49368-2|B4DUR8 T-complex protein 1 subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14441.14441.3 8.17 8.17 99 1 1 1 0 507.9417 1441.8415 S524s TMT10 519 (R) IDDIVsGHK (K) IDDIVS(1.0)GHK K:TMT10,s:Phosphorylated S CCT3 61103.4 1 7 2149.1 95.76 HUMAN 1 -2.9604 0.9111 LRINSTATPDQDRDK-p Q9H2G2;T1097-p LRINSTATPDQDRDK 0.167853660719156 0.369738498542629 -0.39 -0.107666666666667 15.475818983161 5.73055886073385 -0.39 -0.107666666666667 0.028341191310245 0.267266246180832 -2.96817694384034 -1.23613056037894 Q9H2G2 SLK Q9H2G2.T1097.p_SLK Q9H2G2_T1097t _1_1_1097_1097 Q9H2G2 Q9H2G2|Q9H2G2-2 STE20-like serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6684.6684.3 15.21 10.22 2.162 3 1 1 0 667.0012 1919.0234 T1097t TMT10 1092 (R) INSTAtPDQDRDK (I) INS(0.0)T(0.0)AT(0.99)PDQDRDK K:TMT10,t:Phosphorylated T SLK 143320 1 17 329.1 359.67 HUMAN 1 -15.4758 -5.7306 LRKAASLTEDRDRGR-p Q04637-9;T1218-p LRKAASLTEDRDRGR 0.0395731079578075 0.0480248023052339 2.01733333333333 0.496 31.3842183232028 17.6351103253552 2.01733333333333 0.496 0.00072707325170493 0.01723808299962 6.86458314200612 3.38608992459244 Q04637 EIF4G1 Q04637.9.T1218.p_EIF4G1 Q04637-9_T1218t _1_1_1218_1218 Q04637-9 Q04637-9|Q04637-8|E7EUU4 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5251.5251.4 8.96 8.96 1.147 2 1 1 0 450.7408 1719.9754 T1218t TMT10 1213 (R) KAASLtEDRDR (G) KAAS(0.0)LT(0.99)EDRDR K:TMT10,t:Phosphorylated T EIF4G1 176975.4 1 28 107.1 585.61 HUMAN 1 31.3842 17.6351 LRKELGDSPKDKVPF-p P80217-2;S36-p LRKELGDSPKDKVPF 0.677921661300825 0.575732166242944 0.0636666666666666 -0.069 3.1599546823851 3.23232831675439 0.0636666666666667 -0.069 0.483063842671854 0.475080460017326 0.752717795963454 -0.767105832950911 P80217 IFI35 P80217.2.S36.p_IFI35 P80217-2_S36s _1_1_36_36 P80217-2 P80217-2 Isoform 2 of Interferon-induced 35 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20169.20169.4 11.33 11.33 3.274 2 1 1 0 685.6445 2659.5841 S36s TMT10 32 (K) ELGDsPKDKVPFSVPK (I) ELGDS(0.99)PKDKVPFS(0.0)VPK K:TMT10,s:Phosphorylated S IFI35 31947.3 2 2 4472.1 30.94 HUMAN 1 3.16 -3.2323 LRKGASLSNGQGSRV-p O43639;S189-p LRKGASLSNGQGSRV 0.661198352552531 0.902244640869928 0.176 0.0183333333333333 3.36431534766804 0.622696765899988 0.176 0.0183333333333333 0.460859416079846 0.866423700032194 0.793485418006572 0.176343437315586 O43639 NCK2 O43639.S189.p_NCK2 O43639_S189s_1_1_189_189 O43639 O43639 Cytoplasmic protein NCK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5259.5259.2 9 4.82 2.174 3 1 1 0 672.3118 1262.665 S189s N190n TMT10 185 (K) GASLsnGQGSR (V) GAS(0.0)LS(0.99)N(1.0)GQGS(0.0)R s:Phosphorylated S,n:Deamidated NCK2 43142.5 1 5 2561.1 78.45 HUMAN 1 3.3643 0.6227 LRKPSVGSPSLTRRE-p Q9NRJ4;S577-p LRKPSVGSPSLTRRE 0.989097928663681 0.533782345423302 0.00233333333333334 -0.077 0.0966763140028442 3.66734241132853 0.00233333333333335 -0.077 0.977985393679526 0.429799354462691 0.028893295440942 -0.852846740951397 Q9NRJ4 TULP4 Q9NRJ4.S577.p_TULP4 Q9NRJ4_S577s _1_1_577_577 Q9NRJ4 Q9NRJ4|Q9NRJ4-2 Tubby-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7126.7126.3 8.88 6.92 1.251 4 1 1 0 479.9269 1357.8001 S577s Hydrogen 572 (R) KPSVGsPSLTR (R) KPS(0.0)VGS(0.99)PS(0.0)LT(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S TULP4 170594 4 5 2224.1 92.84 HUMAN 1 0.0967 -3.6673 LRKSPVFSDEDSDLD-p O00566;S167-p LRKSPVFSDEDSDLD 0.725865262151426 0.112086749252381 0.0735 0.169166666666667 2.63890003821088 12.5446817881684 0.0735 0.169166666666667 0.544640579523739 0.0556585414324114 0.646063534047628 2.42805874871167 O00566 MPHOSPH10 O00566.S167.p_MPHOSPH10 O00566_S167sS171s_2_2_167_171 O00566 O00566|U3KQ48 U3 small nucleolar ribonucleoprotein protein MPP10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.31215.31832.4 21.62 21.62 5.993 5 2 2 0 869.9163 3316.704 S167s S171s TMT10 163 (K) SPVFsDEDsDLDFDISKLEQQSK (V) S(0.0)PVFS(0.99)DEDS(0.99)DLDFDIS(0.0)KLEQQS(0.0)K K:TMT10,s:Phosphorylated S MPHOSPH10 78976.5 14 5 2195.1 93.81 HUMAN 2 2.6389 12.5447 LRKTDHLSLDKATIP-p Q9ULH1-2;S913-p LRKTDHLSLDKATIP 0.302130510906891 0.596320879201749 -0.182 0.0583333333333333 9.73995676331087 3.03921786242895 -0.182 0.0583333333333334 0.106170612708418 0.496681762717708 -1.93656539175424 0.728263708638864 Q9ULH1 ASAP1 Q9ULH1.2.S913.p_ASAP1 Q9ULH1-2_S913s _1_1_913_913 Q9ULH1-2 Q9ULH1-2|A0A0A0MRE5 Isoform 1 of Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11138.11138.4 11.83 11.83 6.894 2 1 1 0 456.7611 1744.0572 S913s TMT10 908 (R) KTDHLsLDK (A) KT(0.0)DHLS(0.99)LDK K:TMT10,s:Phosphorylated S ASAP1 126865.1 3 7 801.1 222.95 HUMAN 1 -9.74 3.0392 LRLESLYSDEEDESA-p Q9UP95;S967-p LRLESLYSDEEDESA 0.286866398353762 0.357108983053956 0.228333333333333 -0.117333333333333 10.233266288504 5.93224912888505 0.228333333333333 -0.117333333333333 0.0947705434738884 0.255137964925298 2.02226751520705 -1.27218546849918 Q9UP95 SLC12A4 Q9UP95.S967.p_SLC12A4 Q9UP95_S967s _1_1_967_967 Q9UP95 Q9UP95-7|Q9UP95-6|Q9UP95-2|Q9UP95-5|I3L4N6 Solute carrier family 12 member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23226.23226.4 22.85 22.85 3.929 7 1 1 0 937.4454 3666.7907 S967s Hydrogen 957 (R) HSALRLESLYsDEEDESAVGADKIQMTWTR (D) HS(0.0)ALRLES(0.0)LY(0.0)S(0.99)DEEDES(0.0)AVGADKIQMT(0.0)WT(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S SLC12A4 121788.8 12 24 1247.1 162.14 HUMAN 1 10.2333 -5.9322 LRLLDIESQEELEDF-p Q9H6S3;S108-p LRLLDIESQEELEDF 0.351928236415973 0.264504295333101 0.127333333333333 0.165333333333333 8.42626079810845 7.60801872257308 0.127333333333333 0.165333333333333 0.143672589764029 0.173459514996837 1.70903709297027 1.56660756873019 Q9H6S3 EPS8L2 Q9H6S3.S108.p_EPS8L2 Q9H6S3_S108s _1_1_108_108 Q9H6S3 Q9H6S3 Epidermal growth factor receptor kinase substrate 8-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.34965.34965.3 17.72 17.72 17.716 2 1 1 0 894.1136 2600.3657 S108s TMT10 103 (R) LLDIEsQEELEDFPLPTVQR (S) LLDIES(0.99)QEELEDFPLPT(0.0)VQR s:Phosphorylated S EPS8L2 81246.7 2 3 559.1 272.21 HUMAN 1 8.4263 7.608 LRLLSFRSMEEARLV-p O43149;S1540-p LRLLSFRSMEEARLV 0.317293780834702 0.100719018777758 0.142 0.280333333333333 9.33712076368948 13.1700190695788 0.142 0.280333333333333 0.116489806437441 0.0481945681429382 1.86673735487767 2.54033342997743 O43149 ZZEF1 O43149.S1540.p_ZZEF1 O43149_S1540s _1_1_1540_1540 O43149 O43149 Zinc finger ZZ-type and EF-hand domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20232.20232.3 11.2 11.2 2.318 2 1 1 0 549.9429 1567.8464 S1540s TMT10 1535 (R) LLSFRsMEEAR (L) LLS(0.0)FRS(0.99)MEEAR s:Phosphorylated S ZZEF1 335976 2 7 1481.1 138.54 HUMAN 1 9.3371 13.17 LRLNQPGTPTRTAV_-p P36507;T394-p LRLNQPGTPTRTAV_ 0.207427487300816 0.0424713643855741 -0.225333333333333 -0.373666666666667 13.1826194492665 18.3782050411485 -0.225333333333333 -0.373666666666667 0.0480549417409137 0.0145271190596793 -2.54402664020973 -3.53624316919169 P36507 MAP2K2 P36507.T394.p_MAP2K2 P36507_T394t _1_1_394_394 P36507 P36507|G5E9C7 Dual specificity mitogen-activated protein kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10956.10956.3 11.7 11.7 4.767 3 1 1 0 521.9411 1483.843 T394t TMT10 389 (R) LNQPGtPTRTAV (-) LNQPGT(0.99)PT(0.0)RT(0.0)AV t:Phosphorylated T MAP2K2 44708.6 14 5 1640.1 124.72 HUMAN 1 -13.1826 -18.3782 LRLPQIGSKNKLSSS-p Q8NFA0;S1416-p LRLPQIGSKNKLSSS 0.275195711349952 0.00513016600942713 -0.175333333333333 -0.629 10.6073423752323 33.3254640311967 -0.175333333333333 -0.629 0.0869492344288328 0.00046500068952234 -2.08745299556108 -7.49762533533082 Q8NFA0 USP32 Q8NFA0.S1416.p_USP32 Q8NFA0_S1416s _1_1_1416_1416 Q8NFA0 Q8NFA0|P35125|K7EQL6 Ubiquitin carboxyl-terminal hydrolase 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19869.19869.3 8.16 8.16 99 1 1 1 0 517.3128 1469.9568 S1416s TMT10 1409 (R) LRLPQIGsK (N) LRLPQIGS(1.0)K K:TMT10,s:Phosphorylated S USP32 183934.5 3 5 1352.1 150.83 HUMAN 1 -10.6073 -33.3255 LRLRQLLSPKGERRM-p Q6ZRV2;S974-p LRLRQLLSPKGERRM 0.222327324136616 0.0409363643010534 -0.188333333333333 -0.306333333333333 12.5651528267016 18.6014140968063 -0.188333333333333 -0.306333333333333 0.055396804965465 0.0137993487385464 -2.43299702570031 -3.58196241138987 Q6ZRV2 FAM83H Q6ZRV2.S974.p_FAM83H Q6ZRV2_S974s _1_1_974_974 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11564.11564.3 11.3 8.28 99 1 1 1 0 522.6329 1485.9153 S974s TMT10 971 (R) QLLsPKGER (R) QLLS(1.0)PKGER K:TMT10,s:Phosphorylated S FAM83H 127633.5 10 26 7.1 1347.23 HUMAN 1 -12.5652 -18.6014 LRLTSIGSDEDEETE-p Q9UHW9;S1032-p LRLTSIGSDEDEETE 0.846195379521766 0.717479737699147 -0.0286666666666667 0.043 1.40380656686118 1.9841788057921 -0.0286666666666667 0.0430000000000001 0.7238012741948 0.63326009161269 -0.372311826780853 0.505236976082983 Q9UHW9 SLC12A6 Q9UHW9.S1032.p_SLC12A6 Q9UHW9_S1032s _1_1_1032_1032 Q9UHW9 Q9UHW9|Q9UHW9-4|Q9UHW9-3|Q9UHW9-2|Q9UHW9-5|Q9UHW9-6 Solute carrier family 12 member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18152.18152.3 15.81 15.81 2.311 6 1 1 0 871.4022 2532.2241 S1032s TMT10 1027 (R) LTSIGsDEDEETETYQEK (V) LT(0.0)S(0.0)IGS(0.99)DEDEET(0.0)ET(0.0)Y(0.0)QEK K:TMT10,s:Phosphorylated S SLC12A6 128698.7 1 13 1247.3 162.14 HUMAN 1 -1.4038 1.9842 LRLVVPASQCGSLIG-p Q15366-2;S107-p LRLVVPASQCGSLIG 0.955641444333664 0.802952164655345 0.00999999999999999 0.0266666666666667 0.387482213445117 1.33425981619813 0.00999999999999999 0.0266666666666667 0.914643344753604 0.735485336221405 0.112287501171386 0.355706053218236 Q15366 PCBP2 Q15366.2.S107.p_PCBP2 Q15366-2_S107s _1_1_107_107 Q15366-2 Q15366-2|Q15366-3|Q15366-6|E9PFP8|P57721-5 Isoform 2 of Poly(rC)-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24004.24004.3 13.27 13.27 2.747 2 1 1 0 656.3657 1887.1138 S107s TMT10 102 (R) LVVPAsQCGSLIGK (G) LVVPAS(0.99)QCGS(0.0)LIGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCBP2 39049.9 1 3 1045.1 184.66 HUMAN 1 0.3875 1.3343 LRMEVDRSPGLPMSD-p Q6WCQ1-2;S619-p LRMEVDRSPGLPMSD 0.0511487796737011 0.00894425492005138 -0.454333333333333 -0.656 28.3110985933416 29.0240345607107 -0.454333333333333 -0.656 0.0014753332850753 0.00125197755747587 -5.93428135525276 -6.13128814017489 Q6WCQ1 MPRIP Q6WCQ1.2.S619.p_MPRIP Q6WCQ1-2_S619s _1_1_619_619 Q6WCQ1-2 Q6WCQ1-2|Q6WCQ1-3 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25515.25515.5 18.41 14.68 4.738 4 1 1 0 838.2128 4107.0713 S619s TMT10 595 (K) RFGMLDATDGPGTEDAALRMEVDRsPGLPMSDLK (T) RFGMLDAT(0.0)DGPGT(0.0)EDAALRMEVDRS(0.99)PGLPMS(0.0)DLK K:TMT10,s:Phosphorylated S MPRIP 118899.7 14 13 204.1 449.03 HUMAN 1 -28.3111 -29.024 LRNEFWFSDGSLSDK-p Q9P2F8;S1549-p LRNEFWFSDGSLSDK 0.984175271238623 0.452937401538636 -0.00433333333333335 -0.1 0.13923050022165 4.58371721686381 -0.00433333333333335 -0.1 0.968449434680882 0.348039293437487 -0.0414160600893489 -1.0269947798471 Q9P2F8 SIPA1L2 Q9P2F8.S1549.p_SIPA1L2 Q9P2F8_S1549s _1_1_1549_1549 Q9P2F8 Q9P2F8|Q9P2F8-2 Signal-induced proliferation-associated 1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26248.26248.2 10.46 10.46 2.388 3 1 1 0 920.9052 1760.8329 S1549s Hydrogen 1544 (R) NEFWFsDGSLSDK (S) NEFWFS(0.99)DGS(0.0)LS(0.0)DK K:TMT10-Lys-Only,s:Phosphorylated S SIPA1L2 192488.1 2 13 322.1 363.46 HUMAN 1 -0.1392 -4.5837 LRNIRSKSLKEGLTV-p Q6WCQ1-2;S1016-p LRNIRSKSLKEGLTV 0.116602871314905 0.0183608683193543 0.342666666666667 -0.598666666666667 19.4180140790834 23.890573072942 0.342666666666667 -0.598666666666667 0.0114340106420378 0.00408265510134878 3.75514814888203 -4.76256680989404 Q6WCQ1 MPRIP Q6WCQ1.2.S1016.p_MPRIP Q6WCQ1-2_S1016s _1_1_1016_1016 Q6WCQ1-2 Q6WCQ1-2|Q6WCQ1-3 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13329.13329.3 13.81 13.81 13.809 2 1 1 0 600.0011 1718.0213 S1016s TMT10 1016 (K) sLKEGLTVQER (L) S(0.99)LKEGLT(0.0)VQER K:TMT10,s:Phosphorylated S MPRIP 118899.7 2 18 204.1 449.03 HUMAN 1 19.418 -23.8906 LRNKNRESYEVSLTQ-p Q9NX40;S209-p LRNKNRESYEVSLTQ 0.518207869341824 0.0674297840329181 -0.102333333333333 0.211666666666667 5.27429657940742 15.5796296991303 -0.102333333333333 0.211666666666667 0.296872754510097 0.0276717757854511 -1.15409519893386 2.98584318073356 Q9NX40 OCIAD1 Q9NX40.S209.p_OCIAD1 Q9NX40_S209s _1_1_209_209 Q9NX40 Q9NX40|D6RBN5 OCIA domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12049.12049.4 7.18 7.18 2.447 4 1 1 0 498.7619 1912.054 S209s TMT10 206 (K) NREsYEVSLTQK (T) NRES(0.99)Y(0.0)EVS(0.0)LT(0.0)QK K:TMT10,s:Phosphorylated S OCIAD1 27796.8 1 3 2651.1 75.21 HUMAN 1 -5.2743 15.5796 LRNPETASEPLSEPE-p Q7L4E1;S220-p LRNPETASEPLSEPE 0.453645605913133 0.0304213635298836 0.109 0.371666666666667 6.33356758257963 20.50539923615 0.109 0.371666666666667 0.232617959456872 0.0089014360555417 1.34377557639604 3.9844145841848 Q7L4E1 FAM73B Q7L4E1.S220.p_FAM73B Q7L4E1_S220sS224s_2_2_220_224 Q7L4E1 Q7L4E1|Q7L4E1-3 Mitoguardin 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12153.12153.3 11 11 2.45 4 2 2 0 867.7199 2441.2106 S220s S224s TMT10 211 (R) DGLRNPETAsEPLsEPESQR (K) DGLRNPET(0.0)AS(0.99)EPLS(0.99)EPES(0.0)QR s:Phosphorylated S MIGA2 65929 2 9 1662.1 122.67 HUMAN 1 6.3336 20.5054 LRNPYLLSEEEDDDV-p O60524;S417-p LRNPYLLSEEEDDDV 0.336940767668124 0.0827361607772573 -0.194333333333333 0.240666666666667 8.80260699395482 14.3350832803864 -0.194333333333333 0.240666666666667 0.131746564951288 0.0368545974540614 -1.77419385689266 2.75295104061888 O60524 NEMF O60524.S417.p_NEMF O60524_S417s _1_1_417_417 O60524 O60524|O60524-3|O60524-5|O60524-4 Nuclear export mediator factor NEMF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17741.17741.5 25.94 25.94 6.528 3 1 1 0 829.2065 4062.0282 S417s Hydrogen 412 (R) NPYLLsEEEDDDVDGDVNVEKNETEPPKGK (K) NPY(0.0)LLS(0.99)EEEDDDVDGDVNVEKNET(0.0)EPPKGK K:TMT10-Lys-Only,s:Phosphorylated S NEMF 123408.6 21 1 1429.1 143.12 HUMAN 1 -8.8026 14.3351 LRPEDDYSPRERRGG-p A0A0G2JPP5;S835-p LRPEDDYSPRERRGG 0.486305536183135 0.433873340106222 0.102333333333333 -0.0806666666666667 5.76874705011149 4.83205905403653 0.102333333333333 -0.0806666666666667 0.264926434741578 0.328695754433962 1.24325609755685 -1.0729795368066 A0A0G2JPP5 SCRIB A0A0G2JPP5.S835.p_SCRIB A0A0G2JPP5_S835s _1_1_835_835 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21749.21749.3 19.33 16.74 5.43 4 1 1 0 946.7917 2758.3919 S835s TMT10 816 (R) MVEPENAVTITPLRPEDDYsPR (E) MVEPENAVT(0.0)IT(0.0)PLRPEDDY(0.0)S(0.99)PR s:Phosphorylated S SCRIB 178690.9 10 18 22.1 1004.81 HUMAN 1 5.7687 -4.8321 LRPEPPGSVQLEEKS-p Q9BQK8-2;S187-p LRPEPPGSVQLEEKS 0.252651211577592 0.642776922764433 0.190333333333333 -0.0473333333333333 11.3937557192667 2.61578795260059 0.190333333333333 -0.0473333333333333 0.0725478302369388 0.547546749014324 2.22524151741723 -0.641148924083565 Q9BQK8 LPIN3 Q9BQK8.2.S187.p_LPIN3 Q9BQK8-2_S187s _1_1_187_187 Q9BQK8-2 Q9BQK8-2 Isoform 2 of Phosphatidate phosphatase LPIN3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15655.15655.3 16.97 16.97 99 1 1 1 0 706.3877 2037.1745 S187s TMT10 180 (K) LRPEPPGsVQLEEK (S) LRPEPPGS(1.0)VQLEEK K:TMT10,s:Phosphorylated S LPIN3 94213.1 1 2 1554.1 131.9 HUMAN 1 11.3938 -2.6158 LRPISDDSESIEESD-p Q71F23;S139-p LRPISDDSESIEESD 0.146008485171869 0.945896402365987 0.762666666666667 0.00700000000000001 17.0212977225295 0.345641159664477 0.762666666666667 0.00700000000000001 0.0198550153770668 0.923497840089311 3.26683075013934 0.100580732160432 Q71F23 CENPU Q71F23.S139.p_CENPU Q71F23_S136sS139s_2_2_136_139 Q71F23 Q71F23|Q71F23-3|Q09GN1 Centromere protein U HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14450.14450.3 8.31 8.31 1.101 5 2 2 0 780.0057 2178.0724 S136s S139s TMT10 132 (K) LRPIsDDsESIEESDTR (R) LRPIS(0.99)DDS(0.99)ES(0.0)IEES(0.0)DT(0.0)R s:Phosphorylated S CENPU 47749 2 13 1181.1 168.95 HUMAN 1 17.0213 0.3456 LRPLSPVTPPPPNSG-p E7EWN3;T874-p LRPLSPVTPPPPNSG 0.635646593994659 0.0761298230152036 -0.0806666666666667 -0.221 3.669614247324 14.842883140007 -0.0806666666666667 -0.221 0.429574581102999 0.0327877553587615 -0.85342462682956 -2.84720129682464 E7EWN3 SETD5 E7EWN3.T874.p_SETD5 E7EWN3_T874t _1_1_874_874 E7EWN3 E7EWN3|Q9C0A6 SET domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20353.20353.3 14.27 14.27 2.754 4 1 1 0 799.1258 2315.3851 T874t TMT10 866 (K) LLRPLSPVtPPPPNSGSK (S) LLRPLS(0.0)PVT(0.99)PPPPNS(0.0)GS(0.0)K K:TMT10,t:Phosphorylated T SETD5 161030.5 1 10 773.1 227.48 HUMAN 1 -3.6696 -14.8429 LRPPGGGSNFSLGFD-p Q9UK76;S28-p LRPPGGGSNFSLGFD 0.176186493515605 0.117316132236844 0.217 -0.166666666666667 14.9832940670213 12.270207337666 0.217 -0.166666666666667 0.0317446536668846 0.0592897018252493 2.87531854721662 -2.37913687931276 Q9UK76 HN1 Q9UK76.S28.p_HN1 Q9UK76_S28s _1_1_28_28 Q9UK76 Q9UK76-2|J3KT51 Jupiter microtubule associated homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22178.22178.4 8.82 8.82 1.4 3 1 1 0 806.4288 3142.705 S28s TMT10 20 (R) VLRPPGGGsNFSLGFDEPTEQPVRK (N) VLRPPGGGS(0.99)NFS(0.0)LGFDEPT(0.0)EQPVRK K:TMT10,s:Phosphorylated S JPT1 16014.2 2 2 705.1 239.23 HUMAN 1 14.9833 -12.2702 LRPPKVLSPGVSHRL-p Q14676;S108-p LRPPKVLSPGVSHRL 0.625942380562294 0.320616597438952 0.101333333333333 0.156666666666667 3.78017908460135 6.53283294370681 0.101333333333333 0.156666666666667 0.418776296205815 0.222186007763678 0.874870313920544 1.3786081058431 Q14676 MDC1 Q14676.S108.p_MDC1 Q14676_S108s _1_1_108_108 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8129.8129.3 13.38 13.38 13.38 2 1 1 0 420.8931 1180.7 S108s TMT10 106 (K) VLsPGVSHR (L) VLS(0.99)PGVS(0.0)HR s:Phosphorylated S MDC1 227803.2 3 3 6.1 1662.62 HUMAN 1 3.7802 6.5328 LRPRNKRSRSPLELE-p Q92466;S24-p LRPRNKRSRSPLELE 0.306383440584975 0.050124945718593 0.141333333333333 0.233 9.62126136927703 17.375016443537 0.141333333333333 0.233 0.109112338344604 0.0183019917668012 1.91597898525756 3.33425536155988 Q92466 DDB2 Q92466.S24.p_DDB2 Q92466_S24sS26s_2_2_24_26 Q92466 Q92466|Q92466-4|Q92466-5|Q92466-2|Q92466-3|A0A087WTQ7 DNA damage-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16430.16430.4 11.51 11.51 99 2 2 2 0 494.2493 1814.0424 S24s S26s TMT10 24 (R) sRsPLELEPEAK (K) S(1.0)RS(1.0)PLELEPEAK K:TMT10,s:Phosphorylated S DDB2 48490.7 10 4 1930.1 106.36 HUMAN 1 9.6213 17.375 LRPRSFPSPTKCLRC-p Q6DT37;S888-p LRPRSFPSPTKCLRC 0.665086558001476 0.00254618099654844 -0.0646666666666667 -0.773333333333333 3.31363391042555 39.6699178642412 -0.0646666666666667 -0.773333333333333 0.466269071621541 0.00010789671279567 -0.783425734504343 -9.98387903344408 Q6DT37 CDC42BPG Q6DT37.S888.p_CDC42BPG Q6DT37_S888s _1_1_888_888 Q6DT37 Q6DT37 Serine/threonine-protein kinase MRCK gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13029.13029.2 9.5 4.2 2.437 3 1 1 0 651.3478 1221.7243 S888s TMT10 885 (R) SFPsPTK (C) S(0.0)FPS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S CDC42BPG 173882.5 2 4 997.1 190.4 HUMAN 1 -3.3136 -39.6699 LRPRTVSSPIPYTPS-p Q16204;S352-p LRPRTVSSPIPYTPS 0.513407885747709 0.330134381111663 0.0896666666666667 0.101333333333333 5.34844889005462 6.37304752035606 0.0896666666666667 0.101333333333333 0.291846917742986 0.230512907165986 1.16754715579214 1.35041732637486 Q16204 CCDC6 Q16204.S352.p_CCDC6 Q16204_S351sS352s_2_2_351_352 Q16204 Q16204 Coiled-coil domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17681.17681.2 8.89 8.89 2.812 9 2 2 0 1026.4675 1891.9963 S351s S352s TMT10 349 (R) TVssPIPYTPSPSSSR (P) T(0.0)VS(0.99)S(0.99)PIPY(0.0)T(0.0)PS(0.0)PS(0.0)S(0.0)S(0.0)R s:Phosphorylated S CCDC6 53461.2 8 17 423.1 319.68 HUMAN 1 5.3484 6.373 LRQASQLSLESTVGP-p Q9H426-2;S258-p LRQASQLSLESTVGP 0.787687768114672 0.705405308328847 -0.0393333333333333 0.046 2.00163034038606 2.08204912337615 -0.0393333333333333 0.046 0.630720527706002 0.619148874314691 -0.509163060604519 0.526834597839579 Q9H426 RIMS4 Q9H426.2.S258.p_RIMS4 Q9H426-2_S258s _1_1_258_258 Q9H426-2 Q9H426-2 Isoform 2 of Regulating synaptic membrane exocytosis protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15252.15252.3 15.75 15.75 2.241 5 1 1 0 739.0146 2135.06 S258s TMT10 253 (R) QASQLsLESTVGPCGERS (-) QAS(0.0)QLS(0.99)LES(0.0)T(0.0)VGPCGERS(0.0) C:Carbamidomethylation,s:Phosphorylated S RIMS4 29686.2 1 1 5866.1 15.75 HUMAN 1 -2.0016 2.082 LRQEEAEYVRALFDF-p P46108;Y136-p LRQEEAEYVRALFDF 0.117289050573617 0.0310908781831712 -0.453666666666667 0.529 19.3725596505397 20.364827007436 -0.453666666666667 0.529 0.0115543105199561 0.00919427097623272 -3.74557002025918 3.9539010295334 P46108 CRK P46108.Y136.p_CRK P46108_Y136y _1_1_136_136 P46108 P46108|P46108-2 Adapter molecule crk GG20160819_MSz_CCLE_T4D7_pY_Injection_02.13596.13596.3 9.53 5.38 8.194 2 1 1 0 715.0311 2063.1083 Y136y TMT10 123 (R) QGSGVILRQEEAEyVR (A) QGS(0.0)GVILRQEEAEY(0.99)VR y:Phosphorylated Y CRK 33887.1 1 1 38.1 53.65 HUMAN 1 -19.3726 20.3648 LRQEKALSAIADLLT-p O60716-3;S713-p LRQEKALSAIADLLT 0.984096222666884 0.301531103914388 -0.00433333333333334 0.214 0.139897439970506 6.87275317916608 -0.00433333333333335 0.214 0.968300722722193 0.205458769170181 -0.0416114057556922 1.43833026836943 O60716 CTNND1 O60716.3.S713.p_CTNND1 O60716-3_S713s _1_1_713_713 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-24|O60716-25|O60716-26|O60716-28|O60716-30|O60716-27|O60716-29|O60716-31|O60716-32 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.33133.33133.3 19.36 19.36 9.45 2 1 1 0 654.668 1882.0232 S713s TMT10 711 (K) ALsAIADLLTNEHER (V) ALS(0.99)AIADLLT(0.0)NEHER s:Phosphorylated S CTNND1 105545.3 3 29 21.1 1014.17 HUMAN 1 -0.1399 6.8728 LRQFKSGSPVATFKQ-p Q9BQ67;S344-p LRQFKSGSPVATFKQ 0.45453088270964 0.305800721798144 -0.100333333333333 -0.100666666666667 6.3163703779464 6.79791813017378 -0.100333333333333 -0.100666666666667 0.233540906820232 0.209029791316098 -1.34073264524283 -1.42520896983647 Q9BQ67 GRWD1 Q9BQ67.S344.p_GRWD1 Q9BQ67_S344s _1_1_344_344 Q9BQ67 Q9BQ67 Glutamate-rich WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14738.14738.3 9.13 9.13 2.063 3 1 1 0 477.9264 1351.7986 S344s TMT10 342 (K) SGsPVATFK (Q) S(0.0)GS(0.99)PVAT(0.0)FK K:TMT10,s:Phosphorylated S GRWD1 49817.7 4 1 6488.1 11.4 HUMAN 1 -6.3164 -6.7979 LRQGDDSSDEEDKER-p Q12846;S15-p LRQGDDSSDEEDKER 0.11084243642501 0.0218578827823035 0.317333333333333 0.393333333333333 19.9902412557156 22.6924628459332 0.317333333333333 0.393333333333333 0.0100224956038426 0.00537964620976914 3.87685634913281 4.47717207987723 Q12846 STX4 Q12846.S15.p_STX4 Q12846_S14sS15s_2_2_14_15 Q12846 Q12846|H3BMK2 Syntaxin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11956.11956.5 12.18 12.18 4.119 4 2 2 0 773.7728 3704.8993 S14s S15s TMT10 5 (R) THELRQGDDssDEEDKERVALVVHPGTAR (L) T(0.0)HELRQGDDS(0.99)S(0.99)DEEDKERVALVVHPGT(0.0)AR K:TMT10,s:Phosphorylated S STX4 34293.4 16 5 1970.1 104.86 HUMAN 1 19.9902 22.6925 LRQGKRPSPLSENVS-p Q99618;S222-p LRQGKRPSPLSENVS 0.880406130198464 0.00480740028593783 -0.0246666666666667 -0.582 1.08870564726904 33.8554373822157 -0.0246666666666667 -0.582 0.77826846828962 0.000411581894400731 -0.295983648196358 -7.68221617689218 Q99618 CDCA3 Q99618.S222.p_CDCA3 Q99618_S222s _1_1_222_222 Q99618 Q99618|J3KMY0 Cell division cycle-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14724.14724.3 13.48 13.48 2.503 3 1 1 0 665.363 1914.106 S222s TMT10 220 (K) RPsPLSENVSELK (E) RPS(0.99)PLS(0.0)ENVS(0.0)ELK K:TMT10,s:Phosphorylated S CDCA3 28997.8 3 9 831.1 215.73 HUMAN 1 -1.0887 -33.8554 LRQREEKSPDDLKKK-p Q99549-2;S164-p LRQREEKSPDDLKKK 0.921348781607492 0.341584139709863 -0.0146666666666667 0.0923333333333334 0.698759568888449 6.17863368979238 -0.0146666666666667 0.0923333333333334 0.851381174815145 0.241066371517743 -0.196509229835381 1.31600208902745 Q99549 MPHOSPH8 Q99549.2.S164.p_MPHOSPH8 Q99549-2_S164s_1_1_164_164 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8397.8397.3 12.14 12.14 99 1 1 1 0 741.7381 2160.2591 Q159q S164s Hydrogen 159 (R) qREEKsPDDLKK (K) Q(1.0)REEKS(1.0)PDDLKK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S MPHOSPH8 98148.4 15 7 242.1 413.34 HUMAN 1 -0.6988 6.1786 LRRARHDSPDLAPNV-p Q9BRD0;S271-p LRRARHDSPDLAPNV 0.666639852843335 0.434085164239236 0.0696666666666667 0.077 3.29063336598726 4.82922362027853 0.0696666666666666 0.077 0.468745016367621 0.328910424291638 0.778849562713261 1.07245697205211 Q9BRD0 BUD13 Q9BRD0.S271.p_BUD13 Q9BRD0_S271s _1_1_271_271 Q9BRD0 Q9BRD0 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13558.13558.3 21.22 21.22 15.767 4 1 1 0 697.0007 2009.0199 S271s Hydrogen 267 (R) ARHDsPDLAPNVTYSLPR (T) ARHDS(0.99)PDLAPNVT(0.0)Y(0.0)S(0.0)LPR s:Phosphorylated S BUD13 70576.6 14 16 171.1 490.08 HUMAN 1 3.2906 4.8292 LRRCRTLSGSPRPKN-p Q8TDN4;S311-p LRRCRTLSGSPRPKN 0.202779372132916 0.0111991881444116 -0.209333333333333 -0.472666666666667 13.4481384406266 27.3166608456304 -0.209333333333333 -0.472666666666667 0.0452049669371705 0.00185495729388481 -2.59214136241592 -5.64755882473969 Q8TDN4 CABLES1 Q8TDN4.S311.p_CABLES1 Q8TDN4_S311s _1_1_311_311 Q8TDN4 Q8TDN4 CDK5 and ABL1 enzyme substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7512.7512.3 8.64 8.64 1.173 3 1 1 0 494.2808 1400.8626 S311s TMT10 309 (R) TLsGSPRPK (N) T(0.0)LS(0.99)GS(0.0)PRPK K:TMT10,s:Phosphorylated S CABLES1 68282.3 2 4 1243.1 162.91 HUMAN 1 -13.4481 -27.3167 LRREFEVYGPIKRIH-p P08621;Y126-p LRREFEVYGPIKRIH 0.0659805589016084 0.454850836039172 0.494333333333333 -0.0733333333333333 25.4475837776314 4.56141233080708 0.494333333333333 -0.0733333333333333 0.00285260488926311 0.34983138294727 5.15803652210281 -1.02284245391919 P08621 SNRNP70 P08621.Y126.p_SNRNP70 P08621_Y126y _1_1_126_126 P08621 P08621|P08621-2|P08621-3 U1 small nuclear ribonucleoprotein 70 kDa GG20160819_MSz_CCLE_T4D7_pY_Injection_01.19282.19282.2 17.62 8.27 99 1 1 1 0 888.4814 1695.9834 Y126y TMT10 122 (R) EFEVyGPIKR (I) EFEVY(1.0)GPIKR K:TMT10,y:Phosphorylated Y SNRNP70 51612.9 11 1 41.1 48.77 HUMAN 1 25.4476 -4.5614 LRRGFSDSGGGPPAK-p Q9H307;S68-p LRRGFSDSGGGPPAK 0.351165973253604 0.0778670157019491 0.145 0.194666666666667 8.4467227623364 14.7072326940026 0.145 0.194666666666667 0.142997262577387 0.0338280318328955 1.71258073456122 2.82192314281498 Q9H307 PNN Q9H307.S68.p_PNN Q9H307_S68s _1_1_68_68 Q9H307 Q9H307|G3V579|G3V5F0 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11511.11511.2 10.76 10.76 1.249 2 1 1 0 807.8975 1534.8266 S68s TMT10 64 (R) GFSDsGGGPPAK (Q) GFS(0.0)DS(0.99)GGGPPAK K:TMT10,s:Phosphorylated S PNN 81726.4 2 2 180.1 480.36 HUMAN 1 8.4467 14.7072 LRRGGPISFSSSRSG-p P35580-4;S1966-p LRRGGPISFSSSRSG 0.901435793384257 0.881726598410713 -0.0303333333333333 0.018 0.88415823411246 0.767817253707258 -0.0303333333333333 0.018 0.815800893405218 0.83795032671531 -0.244562878580933 0.214558435669245 P35580 MYH10 P35580.4.S1966.p_MYH10 P35580-4_S1966s _1_1_1966_1966 P35580-4 P35580-4|P35580-3|P35580-2|P35580-5 Isoform 4 of Myosin-10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9593.9593.3 10.31 10.31 2.374 4 1 1 0 487.246 1379.7593 S1966s TMT10 1961 (R) RGGPIsFSSSR (S) RGGPIS(0.99)FS(0.0)S(0.0)S(0.0)R s:Phosphorylated S MYH10 233493.8 2 40 296.2 379.15 HUMAN 1 -0.8842 0.7678 LRRKKSDSASSPSGG-p P98198-3;S1209-p LRRKKSDSASSPSGG 0.0519525792237636 0.0104679227872567 -0.467666666666667 -0.550333333333333 28.0694932310119 27.7756303486485 -0.467666666666667 -0.550333333333333 0.00155973449430731 0.00166892555653503 -5.86559812931842 -5.77461148692563 P98198 ATP8B2 P98198.3.S1209.p_ATP8B2 P98198-3_S1209s _1_1_1209_1209 P98198-3 P98198-3 Isoform 3 of Phospholipid-transporting ATPase ID HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9810.9810.3 15.56 15.56 2.143 5 1 1 0 776.7397 2248.2388 S1209s TMT10 1207 (K) SDsASSPSGGADKPLKG (-) S(0.0)DS(0.99)AS(0.0)S(0.0)PS(0.0)GGADKPLKG K:TMT10,s:Phosphorylated S ATP8B2 140028.6 1 2 4598.1 29 HUMAN 1 -28.0695 -27.7756 LRRLGDSSGPALKRS-p Q9UHD8;S23-p LRRLGDSSGPALKRS 0.516958631742372 0.655941410954736 0.0916666666666667 -0.046 5.29153397552789 2.50358156063612 0.0916666666666667 -0.046 0.29569678487478 0.56187776201275 1.1572249540838 -0.617566930416831 Q9UHD8 SEPT9 Q9UHD8.S23.p_SEPT9 Q9UHD8_S23s _1_1_23_23 Q9UHD8 Q9UHD8 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11348.11348.3 9.45 9.45 1.119 2 1 1 0 546.9708 1558.9317 S23s TMT10 18 (R) RLGDSsGPALK (R) RLGDS(0.0)S(0.99)GPALK K:TMT10,s:Phosphorylated S SEPT9 65685.6 3 3 110.1 572.91 HUMAN 1 5.2915 -2.5036 LRRRFSRSPIRRKRS-p P18583-5;S2031-p LRRRFSRSPIRRKRS 0.703058298151312 0.0274605623760349 0.0546666666666667 0.308333333333333 2.87554352162598 21.1764242800701 0.0546666666666667 0.308333333333333 0.515757613720478 0.00762706718485621 0.695018400012458 4.13193648540121 P18583 SON P18583.5.S2031.p_SON P18583-5_S2031s _1_1_2031_2031 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7545.7545.3 8.4 8.4 8.4 2 1 1 0 391.2107 1091.6523 S2031s TMT10 2028 (R) FSRsPIR (R) FS(0.0)RS(0.99)PIR s:Phosphorylated S SON 267429.6 2 34 45.1 778.56 HUMAN 1 2.8755 21.1764 LRRRGPGTPGPVARP-p Q8N6S5;T19-p LRRRGPGTPGPVARP 0.0469421759938125 0.011999169381373 0.488333333333333 -0.487 29.4880421455048 26.8332716865862 0.488333333333333 -0.487 0.00112511207441894 0.00207335100384787 6.27785894495721 -5.51602960602647 Q8N6S5 ARL6IP6 Q8N6S5.T19.p_ARL6IP6 Q8N6S5_T19t _1_1_19_19 Q8N6S5 Q8N6S5 ADP-ribosylation factor-like protein 6-interacting protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4210.4210.3 8.25 8.25 99 1 1 1 0 458.5804 1293.7589 T19t TMT10 15 (R) RGPGtPGPVAR (P) RGPGT(1.0)PGPVAR t:Phosphorylated T ARL6IP6 24961.1 3 3 1404.1 146.21 HUMAN 1 29.488 -26.8333 LRRRRTLTELYTRMP-p Q99758;T1346-p LRRRRTLTELYTRMP 0.501543218705079 0.3508825126425 -0.112 -0.0966666666666667 5.527613996787 6.02908153690511 -0.112 -0.0966666666666667 0.280051949559065 0.249512234946206 -1.19992786338699 -1.28943444291611 Q99758 ABCA3 Q99758.T1346.p_ABCA3 Q99758_T1346t _1_1_1346_1346 Q99758 Q99758|H0Y3H2 ATP-binding cassette sub-family A member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18996.18996.2 13.53 13.53 2.2 4 1 1 0 653.3357 1225.699 T1346t TMT10 1344 (R) TLtELYTR (M) T(0.0)LT(0.99)ELY(0.0)T(0.0)R t:Phosphorylated T ABCA3 192956.2 1 11 1112.1 175.87 HUMAN 1 -5.5276 -6.0291 LRRRTRLSTASEETV-p O43379-4;S49-p LRRRTRLSTASEETV 0.74023978904261 0.025983540595186 -0.075 -0.585666666666667 2.47799933874969 21.556704146959 -0.075 -0.585666666666667 0.565197283873692 0.00698762492513595 -0.612236572882091 -4.21694445163375 O43379 WDR62 O43379.4.S49.p_WDR62 O43379-4_S49s _1_1_49_49 O43379-4 O43379-4|O43379-2|O43379-3 Isoform 4 of WD repeat-containing protein 62 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7250.7250.2 11.18 11.18 1.111 5 1 1 0 950.9692 1820.9664 S49s TMT10 46 (R) TRLsTASEETVQNR (V) T(0.0)RLS(0.99)T(0.0)AS(0.0)EET(0.0)VQNR s:Phosphorylated S WDR62 168676.3 2 1 671.1 248.72 HUMAN 1 -2.478 -21.5567 LRRSEEHSPPRGIND-p Q8IXT5;S254-p LRRSEEHSPPRGIND 0.439380752402972 0.0404183932092376 0.134 0.325333333333333 6.57791576139602 18.6836077244627 0.134 0.325333333333333 0.219891490893415 0.0135406411142521 1.38690787926826 3.59887165874451 Q8IXT5 RBM12B Q8IXT5.S254.p_RBM12B Q8IXT5_S254s _1_1_254_254 Q8IXT5 Q8IXT5|B9ZVT1 RNA-binding protein 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4452.4452.4 14.03 14.03 5.507 2 1 1 0 451.4656 1722.8721 S254s TMT10 250 (R) SEEHsPPRGINDR (H) S(0.0)EEHS(0.99)PPRGINDR s:Phosphorylated S RBM12B 118442.9 8 3 384.1 333.8 HUMAN 1 6.5779 18.6836 LRRSRGLSPGRAGRE-p A0A044PY82;S168-p LRRSRGLSPGRAGRE 0.651222274131585 0.752400094712724 0.161333333333333 -0.159333333333333 3.49050625779512 1.70723233568377 0.161333333333333 -0.159333333333333 0.447661117204302 0.674958026745499 0.81839415680995 -0.442895260281512 A0A044PY82 NotFound A0A044PY82.S168.p_NotFound A0A044PY82_S168s _1_1_168_168 A0A044PY82 A0A044PY82|Q96FF7 Uncharacterized protein MISP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4590.4590.3 7.31 7.31 99 1 1 1 0 393.8781 1099.6534 S168s TMT10 166 (R) GLsPGRAGR (E) GLS(1.0)PGRAGR s:Phosphorylated S MISP3 39175.2 2 1 3347.1 53.23 HUMAN 1 3.4905 -1.7072 LRRSRSGSIKGSRYF-p Q16629;S183-p LRRSRSGSIKGSRYF 0.156450973477083 0.137311161443025 0.264 0.325333333333333 16.161022601087 11.3622722918453 0.264 0.325333333333333 0.0242045905204642 0.0730756640947773 3.09916966146218 2.21866394274144 Q16629 SRSF7 Q16629.S183.p_SRSF7 Q16629_S181sS183s_2_2_181_183 Q16629 Q16629|C9JAB2|Q16629-4 Serine/arginine-rich splicing factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4365.4365.2 8.73 2.48 5.45 3 2 2 0 590.7703 1020.5999 S181s S183s Hydrogen 181 (R) sGsIKGSR (Y) S(0.99)GS(0.99)IKGS(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S SRSF7 27594.3 6 6 2858.1 67.97 HUMAN 1 16.161 11.3623 LRRYGYDSNLFSFES-p Q8WU20;S69-p LRRYGYDSNLFSFES 0.0499167591004882 0.184522173394006 -0.525 -0.155 28.7759751221269 9.64821683086494 -0.525 -0.155 0.00132556945401324 0.108437205480742 -6.06818467403937 -1.91990732558612 Q8WU20 FRS2 Q8WU20.S69.p_FRS2 Q8WU20_S69s _1_1_69_69 Q8WU20 Q8WU20|O43559 Fibroblast growth factor receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21429.21429.3 11.51 11.51 3.832 5 1 1 0 702.9875 2026.982 S69s TMT10 65 (R) YGYDsNLFSFESGRR (C) Y(0.0)GY(0.0)DS(0.99)NLFS(0.0)FES(0.0)GRR s:Phosphorylated S FRS2 57427.4 2 2 301.1 376.53 HUMAN 1 -28.776 -9.6482 LRSDSEGSDYTPGKK-p F5GWX5;S101-p LRSDSEGSDYTPGKK 0.587712759915442 0.0144671845653115 0.0746666666666667 0.357 4.24979184881957 25.4976321892469 0.0746666666666667 0.357 0.37585541807342 0.00281991995676594 0.964586431428087 5.1643123375738 F5GWX5 CHD4 F5GWX5.S101.p_CHD4 F5GWX5_S96sS98sS101s_3_3_96_101 F5GWX5 F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24737.24737.4 15.04 15.04 3.584 7 3 3 0 1172.2712 4446.1563 S96s S98s S101s TMT10 74 (K) ELGDSSGEGPEFVEEEEEVALRsDsEGsDYTPGKK (K) ELGDS(0.0)S(0.0)GEGPEFVEEEEEVALRS(0.99)DS(0.99)EGS(0.99)DY(0.0)T(0.0)PGKK K:TMT10,s:Phosphorylated S CHD4 218583 6 34 49.1 753.68 HUMAN 1 4.2498 25.4976 LRSEAPNSSEEDSPI-p Q8IYH5;S130-p LRSEAPNSSEEDSPI 0.204713889706557 0.0824598277305984 0.203333333333333 -0.295 13.3205243877317 14.3581499948346 0.203333333333333 -0.295 0.0465529879846179 0.0366593702768918 2.56898731894448 -2.75721036791401 Q8IYH5 ZZZ3 Q8IYH5.S130.p_ZZZ3 Q8IYH5_S130sS131sS135s_3_3_130_135 Q8IYH5 Q8IYH5|Q8IYH5-2|Q8IYH5-4 ZZ-type zinc finger-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13745.13745.4 7.57 7.57 7.568 6 3 3 0 869.6437 3235.6533 S130s S131s S135s TMT10 125 (R) SEAPNssEEDsPIKSDKESVEQR (S) S(0.0)EAPNS(0.99)S(0.99)EEDS(0.99)PIKS(0.0)DKES(0.0)VEQR K:TMT10,s:Phosphorylated S ZZZ3 103390.7 2 12 1027.1 186.83 HUMAN 1 13.3205 -14.3581 LRSFNMPSLDKMDGS-p Q96PC5;S1255-p LRSFNMPSLDKMDGS 0.0868192866229433 0.0372582401182819 -0.394333333333333 0.268333333333333 22.6671903929596 19.204388558656 -0.394333333333333 0.268333333333333 0.00541104269530071 0.0120105015644975 -4.47618923758024 3.70695171889818 Q96PC5 MIA2 Q96PC5.S1255.p_MIA2 Q96PC5_S1255s _1_1_1255_1255 Q96PC5 Q96PC5|G3V599|O15320-5|O15320-10|O15320-3|O15320-4|O15320-2|Q96RT6|O15320-7|O15320-6|O15320-8 Melanoma inhibitory activity protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22847.22847.2 12.42 10.08 11.583 2 1 1 0 788.8964 1496.8183 S1255s TMT10 1250 (R) SFNMPsLDK (M) S(0.0)FNMPS(0.99)LDK K:TMT10,s:Phosphorylated S MIA2 160460.4 7 11 569.1 269.96 HUMAN 1 -22.6672 19.2044 LRSHSQASLAGPGPV-p Q9P2M7;S134-p LRSHSQASLAGPGPV 0.1560557092084 0.246185227108675 0.334666666666667 0.255666666666667 16.2151562115318 8.02104262887927 0.334666666666667 0.255666666666667 0.0239047595068641 0.157723257144049 3.10961227381992 1.63829004714698 Q9P2M7 CGN Q9P2M7.S134.p_CGN Q9P2M7_S134s _1_1_134_134 Q9P2M7 Q9P2M7|Q9P2M7-2 Cingulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7940.7940.3 18.45 18.45 2.195 4 1 1 0 696.0051 2006.0253 S134s TMT10 129 (R) SHSQAsLAGPGPVDPSNR (S) S(0.0)HS(0.0)QAS(0.99)LAGPGPVDPS(0.0)NR s:Phosphorylated S CGN 136611.7 1 5 239.1 416.31 HUMAN 1 16.2152 8.021 LRSIIKTTPSQFSTL-p Q6KC79;T1734-p LRSIIKTTPSQFSTL 0.702883247704392 0.677813811682526 -0.0513333333333333 0.0456666666666667 2.87792176590907 2.30769249594088 -0.0513333333333333 0.0456666666666667 0.515475256504458 0.58780158174874 -0.695505853799451 0.575842943203199 Q6KC79 NIPBL Q6KC79.T1734.p_NIPBL Q6KC79_T1734t _1_1_1734_1734 Q6KC79 Q6KC79|Q6KC79-2 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17596.17596.2 10.19 5.08 1.374 5 1 1 0 824.4423 1567.9096 T1734t TMT10 1733 (K) TtPSQFSTLK (M) T(0.0)T(0.99)PS(0.0)QFS(0.0)T(0.0)LK K:TMT10,t:Phosphorylated T NIPBL 318099.5 3 24 50.1 752.87 HUMAN 1 -2.8779 2.3077 LRSLFCGSPPPEAAS-p P51788;S731-p LRSLFCGSPPPEAAS 0.283177951218012 0.00317816438047232 -0.157666666666667 -0.627 10.3563208517783 37.4983705712037 -0.157666666666667 -0.627 0.0921229665764128 0.000177894672759385 -2.04368930967394 -9.06113138139687 P51788 CLCN2 P51788.S731.p_CLCN2 P51788_S731s _1_1_731_731 P51788 P51788|P51788-3|P51788-5|P51788-4 Chloride channel protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21230.21230.4 18.22 16.29 3.72 4 1 1 0 773.3833 3010.5469 S731s TMT10 726 (R) SLFCGsPPPEAASEKLESCEK (R) S(0.0)LFCGS(0.99)PPPEAAS(0.0)EKLES(0.0)CEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CLCN2 99503.6 4 6 1767.1 116.44 HUMAN 1 -10.3563 -37.4984 LRSLLSLTPDKKENL-p Q5T0W9;T782-p LRSLLSLTPDKKENL 0.286324254028197 0.00129606731851265 -0.226 -1.105 10.2493250652633 47.082015127437 -0.226 -1.105 0.0944207603684031 1.95793597994129e-05 -2.02506197910116 -13.8262325953555 Q5T0W9 FAM83B Q5T0W9.T782.p_FAM83B Q5T0W9_T782t _1_1_782_782 Q5T0W9 Q5T0W9 Protein FAM83B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19985.19985.3 13.63 6.23 2.186 3 1 1 0 623.7067 1789.1402 T782t TMT10 777 (R) SLLSLtPDKK (E) S(0.0)LLS(0.0)LT(0.99)PDKK K:TMT10,t:Phosphorylated T FAM83B 115253.5 5 12 249.1 407.75 HUMAN 1 -10.2493 -47.082 LRSMSAPSDLEMIGN-p J3KPF0;S1530-p LRSMSAPSDLEMIGN 0.936107507392066 0.0750505239059433 0.0166666666666667 0.196666666666667 0.559743339875195 14.9262908165077 0.0166666666666667 0.196666666666667 0.879074466994881 0.0321640640552418 0.159480037834591 2.86278151824981 J3KPF0 NotFound J3KPF0.S1530.p_NotFound J3KPF0_S1530s_1_1_1530_1530 J3KPF0 J3KPF0|F8VWT9|Q9Y4D8|Q9Y4D8-4|Q9Y4D8-2 Probable E3 ubiquitin-protein ligase HECTD4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29298.29298.2 7.12 7.12 2.205 4 1 1 0 1276.5615 2471.1632 S1530s N1537n TMT10 1525 (R) SMSAPsDLEMIGnEDLEFTR (A) S(0.0)MS(0.0)APS(0.99)DLEMIGN(1.0)EDLEFT(0.0)R s:Phosphorylated S,n:Deamidated HECTD4 490564.1 1 5 927.1 199.75 HUMAN 1 0.5597 14.9263 LRSNVLLSFDDTPEK-p P49815-4;S923-p LRSNVLLSFDDTPEK 0.401215616195323 0.310607157340277 -0.128333333333333 -0.124 7.32194381841133 6.70961338763337 -0.128333333333333 -0.124 0.185270220400812 0.213323480693604 -1.51725838453366 -1.40970715966232 P49815 TSC2 P49815.4.S923.p_TSC2 P49815-4_S923s _1_1_923_923 P49815-4 P49815|P49815-4|P49815-2|P49815-3|H3BMQ0|P49815-5|P49815-6|P49815-7 Isoform 4 of Tuberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24436.24436.3 15.46 14.48 4.379 3 1 1 0 668.3431 1923.0475 S923s TMT10 918 (R) SNVLLsFDDTPEK (D) S(0.0)NVLLS(0.99)FDDT(0.0)PEK K:TMT10,s:Phosphorylated S TSC2 200147.7 2 3 214.1 435.34 HUMAN 1 -7.3219 -6.7096 LRSQSESSDEVTELD-p Q86YS7-3;S662-p LRSQSESSDEVTELD 0.202846697385928 0.757356365974704 -0.241166666666667 -0.0316666666666667 13.4345043413988 1.66773286252693 -0.241166666666667 -0.0316666666666666 0.0453471049300058 0.681124831928201 -2.58966501259548 -0.433846152790206 Q86YS7 C2CD5 Q86YS7.3.S662.p_C2CD5 Q86YS7-3_S661sS662s_2_2_661_662 Q86YS7-3 Q86YS7-3|Q86YS7-2|Q86YS7-5|Q86YS7-4 Isoform 3 of C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15106.15106.3 14.05 14.05 1.177 6 2 2 0 975.136 2763.4615 S661s S662s TMT10 657 (R) SQSEssDEVTELDLSHGKK (D) S(0.0)QS(0.0)ES(0.99)S(0.99)DEVT(0.0)ELDLS(0.0)HGKK K:TMT10,s:Phosphorylated S C2CD5 117622.7 10 22 349.1 351.16 HUMAN 2 -13.4345 -1.6677 LRSRGRASPGGVSTS-p P54259;S34-p LRSRGRASPGGVSTS 0.769423387089442 0.563567502164288 0.047 0.0886666666666667 2.18024878951433 3.3561021433607 0.047 0.0886666666666667 0.60530619824871 0.461731799704871 0.548359484986785 0.791738473479188 P54259 ATN1 P54259.S34.p_ATN1 P54259_S34s _1_1_34_34 P54259 P54259 Atrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4487.4487.3 17.32 13.12 6.457 6 1 1 0 772.7258 2236.1934 S34s Hydrogen 31 (R) GRAsPGGVSTSSSDGKAEK (S) GRAS(0.99)PGGVS(0.0)T(0.0)S(0.0)S(0.0)S(0.0)DGKAEK K:TMT10-Lys-Only,s:Phosphorylated S ATN1 125583.1 8 1 869.1 209.92 HUMAN 1 2.1802 3.3561 LRSTLRSTPLASPSP-p Q8WYP5-2;T1245-p LRSTLRSTPLASPSP 0.145152146047681 0.129896679275441 0.289333333333333 0.205666666666667 17.073991612498 11.6828634163018 0.289333333333333 0.205666666666667 0.019615565760393 0.0678755963619976 3.277222318981 2.275106366235 Q8WYP5 AHCTF1 Q8WYP5.2.T1245.p_AHCTF1 Q8WYP5-2_T1245t _1_1_1245_1245 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9275.9275.3 10.81 6.27 1.322 7 1 1 0 674.0197 1940.0763 T1245t TMT10 1240 (R) STLRStPLASPSPSPGR (S) S(0.0)T(0.0)LRS(0.0)T(0.99)PLAS(0.0)PS(0.0)PS(0.0)PGR t:Phosphorylated T AHCTF1 258049.6 1 11 40.1 829.79 HUMAN 1 17.074 11.6829 LRSTRPHSLDRQGAF-p Q3KP66-3;S520-p LRSTRPHSLDRQGAF 0.824470084373033 0.025156848274835 0.032 -0.296 1.61635076542431 21.7634929597103 0.032 -0.296 0.689231191538542 0.00666270683012401 0.422058122986676 -4.26360845556013 Q3KP66 C1orf106 Q3KP66.3.S520.p_C1orf106 Q3KP66-3_S520s _1_1_520_520 Q3KP66-3 Q3KP66|Q3KP66-3 Isoform 2 of Innate immunity activator protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3426.3426.3 8.53 6.32 3.086 3 1 1 0 459.8998 1297.7174 S520s TMT10 515 (R) STRPHsLDR (Q) S(0.0)T(0.0)RPHS(0.99)LDR s:Phosphorylated S INAVA 64150.1 1 4 2361.1 86.54 HUMAN 1 1.6164 -21.7635 LRTALINSTGEEVAM-p P02545;S533-p LRTALINSTGEEVAM 0.265049130801901 0.241125660594137 -0.159666666666667 0.191 10.9372442363281 8.13744069329711 -0.159666666666667 0.191 0.0805889646625121 0.153552160240188 -2.14511863419004 1.65845960047904 P02545 LMNA P02545.S533.p_LMNA P02545_S533s _1_1_533_533 P02545 P02545|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16968.16968.3 13.33 13.33 1.285 3 1 1 0 720.0492 2078.168 S533s TMT10 528 (R) TALINsTGEEVAMRK (L) T(0.0)ALINS(0.99)T(0.0)GEEVAMRK K:TMT10,s:Phosphorylated S LMNA 74423.5 3 30 60.1 706.83 HUMAN 1 -10.9372 8.1374 LRTFGHNTMDAVPRI-p P55011;T217-p LRTFGHNTMDAVPRI 0.266193415028892 0.00383049919619955 0.351 -0.604 10.8924618468145 35.8022122052358 0.351 -0.604 0.0814242590661363 0.00026289285295819 2.13728000256222 -8.39427578481758 P55011 SLC12A2 P55011.T217.p_SLC12A2 P55011_T217t _1_1_217_217 P55011 P55011|P55011-3|G3XAL9 Solute carrier family 12 member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10728.10728.3 18.17 18.17 10.661 2 1 1 0 552.2589 1574.7947 T217t TMT10 212 (R) TFGHNtMDAVPR (I) T(0.0)FGHNT(0.99)MDAVPR t:Phosphorylated T SLC12A2 132129.4 1 2 2192.1 93.85 HUMAN 1 10.8925 -35.8022 LRTFSWASVTSKNLP-p Q13283;S253-p LRTFSWASVTSKNLP 0.141525291296506 0.448779663127798 0.312666666666667 -0.094 17.363318927509 4.63884706174745 0.312666666666667 -0.094 0.0183513537614216 0.343649165656144 3.33453970908893 -1.03724175102527 Q13283 G3BP1 Q13283.S253.p_G3BP1 Q13283_S253s _1_1_253_253 Q13283 Q13283 Ras GTPase-activating protein-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23489.23489.2 11.33 11.33 1.978 5 1 1 0 826.4312 1571.8834 S253s TMT10 248 (R) TFSWAsVTSK (N) T(0.0)FS(0.0)WAS(0.99)VT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S G3BP1 52220.4 6 7 1003.1 189.39 HUMAN 1 17.3633 -4.6388 LRTKKRISEAKEELK-p Q99549-2;S204-p LRTKKRISEAKEELK 0.554720459620056 0.0099862872925715 0.08 -0.578666666666667 4.72511631847853 28.1090546306727 0.08 -0.578666666666667 0.336890192583002 0.00154559084610568 1.05343462614887 -5.86826404566082 Q99549 MPHOSPH8 Q99549.2.S204.p_MPHOSPH8 Q99549-2_S204s _1_1_204_204 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13604.13604.4 7.49 7.49 99 1 1 1 0 493.2881 1890.1627 S204s TMT10 202 (K) RIsEAKEELK (E) RIS(1.0)EAKEELK K:TMT10,s:Phosphorylated S MPHOSPH8 98148.4 1 9 242.1 413.34 HUMAN 1 4.7251 -28.1091 LRTKRKFSLDELAGP-p O76064;S157-p LRTKRKFSLDELAGP 0.345621974407163 0.444975922248866 -0.156 0.0736666666666667 8.57301367430937 4.68266388405636 -0.156 0.0736666666666667 0.138898844408471 0.34019945347846 -1.73444856645507 1.04536987703322 O76064 RNF8 O76064.S157.p_RNF8 O76064_S157s _1_1_157_157 O76064 O76064|O76064-3 E3 ubiquitin-protein ligase RNF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22870.22870.3 10.02 10.02 6.162 2 1 1 0 823.433 2388.3175 S157s Hydrogen 155 (R) KFsLDELAGPGAEGPSNLK (S) KFS(0.99)LDELAGPGAEGPS(0.0)NLK K:TMT10-Lys-Only,s:Phosphorylated S RNF8 56372.4 1 2 5961.1 15 HUMAN 1 -8.573 4.6827 LRTQLNDSLKEIHQK-p Q14789-2;S3042-p LRTQLNDSLKEIHQK 0.52155238503858 0.00493909262777022 0.153666666666667 -0.717666666666667 5.22764016724796 33.6404279093497 0.153666666666667 -0.717666666666667 0.300079262147489 0.000432471217646533 1.14561547788196 -7.60686635251325 Q14789 GOLGB1 Q14789.2.S3042.p_GOLGB1 Q14789-2_S3042s _1_1_3042_3042 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12256.12256.3 13.83 13.83 2.321 2 1 1 0 774.4328 2241.317 S3042s TMT10 3037 (R) TQLNDsLKEIHQK (E) T(0.0)QLNDS(0.99)LKEIHQK K:TMT10,s:Phosphorylated S GOLGB1 378557.2 2 29 93.1 610.98 HUMAN 1 5.2276 -33.6404 LRVAYEGSDSEKGEG-p P78549;S71-p LRVAYEGSDSEKGEG 0.255264993053251 0.420518020845712 0.164 0.085 11.2770907506291 5.00807357631618 0.164 0.085 0.0745231021663454 0.315640441639063 2.20472629863073 1.1053137256249 P78549 NTHL1 P78549.S71.p_NTHL1 P78549_S71s _1_1_71_71 P78549 P78549|P78549-2|P78549-3 Endonuclease III-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14480.14480.3 17.02 17.02 2.635 3 1 1 0 878.4473 2553.3651 S71s TMT10 66 (R) VAYEGsDSEKGEGAEPLK (V) VAY(0.0)EGS(0.99)DS(0.0)EKGEGAEPLK K:TMT10,s:Phosphorylated S NTHL1 34788.4 8 2 3002.1 63.53 HUMAN 1 11.2771 5.0081 LRVEFPRSGRGTGRG-p J3KTL2;S91-p LRVEFPRSGRGTGRG 0.24308570935493 0.284872479794399 0.172333333333333 -0.111 11.7489039942884 7.19259325288352 0.172333333333333 -0.111 0.0668512605226166 0.190871319018263 2.28787474713684 -1.49426103906589 J3KTL2 NotFound J3KTL2.S91.p_NotFound J3KTL2_S91s _1_1_91_91 J3KTL2 Q07955-2|J3KTL2|Q07955-3 Serine/arginine-rich-splicing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8779.8779.3 9.82 9.82 99 1 1 1 0 419.5498 1176.6687 S91s TMT10 86 (R) VEFPRsGR (G) VEFPRS(1.0)GR s:Phosphorylated S SRSF1 28442.8 1 86 8.5 1346.57 HUMAN 1 11.7489 -7.1926 LRVFELNSDSGKSTP-p Q9NW68-7;S389-p LRVFELNSDSGKSTP 0.593686393732298 0.938541776588492 -0.0873333333333333 -0.00966666666666664 4.17597901693225 0.391180610014603 -0.0873333333333333 -0.00966666666666665 0.382298063645982 0.913864777670627 -0.950622194992255 -0.113306417359647 Q9NW68 BSDC1 Q9NW68.7.S389.p_BSDC1 Q9NW68-7_S389s _1_1_389_389 Q9NW68-7 Q9NW68-3|Q9NW68-7|Q9NW68-2|Q9NW68-8|Q9NW68-4|Q9NW68-9 Isoform 7 of BSD domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19687.19687.2 14.58 8.92 2.641 2 1 1 0 817.4186 1553.8575 S389s TMT10 384 (R) VFELNsDSGK (S) VFELNS(0.99)DS(0.0)GK K:TMT10,s:Phosphorylated S BSDC1 49387.9 2 5 1426.1 143.74 HUMAN 1 -4.176 -0.3912 LRVHISGSVDGLDKA-p J3KP75;S72-p LRVHISGSVDGLDKA 0.331647864397022 0.0607191599841906 -0.206333333333333 -0.232 8.95193415976457 16.2087656231739 -0.206333333333333 -0.232 0.127293604410708 0.0239399609509435 -1.80004230030128 -3.10614839459347 J3KP75 NotFound J3KP75.S72.p_NotFound J3KP75_S72s _1_1_72_72 J3KP75 J3KP75 Phosphatase and actin regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15688.15688.3 15.6 15.6 3.583 2 1 1 0 588.9829 1684.9634 S72s TMT10 67 (R) VHISGsVDGLDK (A) VHIS(0.0)GS(0.99)VDGLDK K:TMT10,s:Phosphorylated S PHACTR2 68408.7 2 3 2025.1 101.72 HUMAN 1 -8.9519 -16.2088 LRVKLTVSPEPSSKR-p Q969F2;S176-p LRVKLTVSPEPSSKR 0.546818174340453 0.0278147646448292 -0.0856666666666667 -0.392333333333333 4.83891371231918 21.0844524369051 -0.0856666666666667 -0.392333333333333 0.328177368862864 0.00779031029421535 -1.07445382696709 -4.11153161942098 Q969F2 NKD2 Q969F2.S176.p_NKD2 Q969F2_S176s _1_1_176_176 Q969F2 Q969F2|Q969F2-2 Protein naked cuticle homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14148.14148.3 9.26 9.26 2.235 4 1 1 0 528.2889 1502.883 S176s TMT10 173 (K) LTVsPEPSSK (R) LT(0.0)VS(0.99)PEPS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S NKD2 50396.7 1 1 4076.1 38.12 HUMAN 1 -4.8389 -21.0845 LRVKRKRSAEPAEAL-p Q96CW6;S16-p LRVKRKRSAEPAEAL 0.143638422086766 0.897116264488935 -0.26 0.015 17.2045408954957 0.660647294196736 -0.26 0.015 0.0190346944787136 0.858885499378582 -3.30303007122245 0.186428558412705 Q96CW6 SLC7A6OS Q96CW6.S16.p_SLC7A6OS Q96CW6_S16s _1_1_16_16 Q96CW6 Q96CW6 Probable RNA polymerase II nuclear localization protein SLC7A6OS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24000.24000.3 17.08 17.08 99 1 1 1 0 633.0026 1817.0243 S16s TMT10 16 (R) sAEPAEALVLACK (R) S(1.0)AEPAEALVLACK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLC7A6OS 35255.4 2 1 1926.1 106.59 HUMAN 1 -17.2045 0.6606 LRVRLNVSQDDVLYA-p Q13415;S850-p LRVRLNVSQDDVLYA 0.882501296855935 0.099112006217588 0.0223333333333333 -0.205333333333333 1.07000908544869 13.2664163279924 0.0223333333333333 -0.205333333333333 0.78162616942321 0.0471366123606273 0.291348437259282 -2.55774852247154 Q13415 ORC1 Q13415.S850.p_ORC1 Q13415_S850s _1_1_850_850 Q13415 Q13415 Origin recognition complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.31048.31048.3 13.21 12.54 7.587 2 1 1 0 754.054 2180.1851 S850s TMT10 847 (R) LNVsQDDVLYALKDE (-) LNVS(0.99)QDDVLY(0.0)ALKDE K:TMT10,s:Phosphorylated S ORC1 98432 1 8 939.1 198.15 HUMAN 1 1.07 -13.2664 LRWVSELSYVEEKEQ-p E7ETA6;S991-p LRWVSELSYVEEKEQ 0.191100099896272 0.00409545215505738 -0.262 -0.724333333333333 14.0509931028745 35.1606632628401 -0.262 -0.724333333333333 0.0393460092496151 0.000304742954481776 -2.70228572019626 -8.153547855469 E7ETA6 PCM1 E7ETA6.S991.p_PCM1 E7ETA6_S991s _1_1_991_991 E7ETA6 E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31900.31937.4 19.63 14.65 1.734 3 1 1 0 890.9625 3480.8618 S991s TMT10 986 (R) WVSELsYVEEKEQWQEQINQLK (K) WVS(0.0)ELS(0.99)Y(0.0)VEEKEQWQEQINQLK K:TMT10,s:Phosphorylated S PCM1 229381.8 9 31 13.1 1159.95 HUMAN 1 -14.051 -35.1607 LRYGGNLSLQSAMSV-p Q96JK2;S232-p LRYGGNLSLQSAMSV 0.89536917010512 0.0183223906633918 0.0346666666666667 -0.331 0.938764728654342 23.9118934247938 0.0346666666666667 -0.331 0.805607548970569 0.0040626616777457 0.258446875704389 -4.76775134726487 Q96JK2 DCAF5 Q96JK2.S232.p_DCAF5 Q96JK2_S232s _1_1_232_232 Q96JK2 Q96JK2|Q96JK2-3|Q96JK2-2|Q8TBB7 DDB1- and CUL4-associated factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21138.21138.3 11.26 11.26 11.258 4 1 1 0 597.9601 1711.8999 S232s TMT10 227 (R) YGGNLsLQSAMSVR (F) Y(0.0)GGNLS(0.99)LQS(0.0)AMS(0.0)VR s:Phosphorylated S DCAF5 105045.5 1 3 948.1 196.79 HUMAN 1 0.9388 -23.9119 LRYQKLPSDEDESGT-p Q9ULH0-4;S1502-p LRYQKLPSDEDESGT 0.22741424181199 0.13226793736263 -0.22 0.155333333333333 12.3658263508602 11.5818734963636 -0.22 0.155333333333333 0.0579985805619876 0.0694724556766302 -2.39739516441424 2.25730206331273 Q9ULH0 KIDINS220 Q9ULH0.4.S1502.p_KIDINS220 Q9ULH0-4_S1502s _1_1_1502_1502 Q9ULH0-4 Q9ULH0|Q9ULH0-4|Q9ULH0-2|Q9ULH0-5 Isoform 4 of Kinase D-interacting substrate of 220 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18790.18790.4 13.5 9.79 1.495 6 1 1 0 841.4182 3282.6832 S1502s TMT10 1497 (R) YQKLPsDEDESGTEESDNTPLLK (D) Y(0.0)QKLPS(0.99)DEDES(0.0)GT(0.0)EES(0.0)DNT(0.0)PLLK K:TMT10,s:Phosphorylated S KIDINS220 196163.1 2 12 306.1 373.6 HUMAN 1 -12.3658 11.5819 LRYYTSASGDEMVSL-p P07900;S470-p LRYYTSASGDEMVSL 0.903636620360925 0.462236671145956 -0.023 0.095 0.865189320044626 4.46942478096638 -0.023 0.095 0.819371903890018 0.357320161743566 -0.239712124296742 1.00567720076048 P07900 HSP90AA1 P07900.S470.p_HSP90AA1 P07900_S470s _1_1_470_470 P07900 P07900-2 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21051.21051.2 15.67 15.67 2.382 6 1 1 0 1045.0031 2009.0302 S470s TMT10 465 (R) YYTSAsGDEMVSLK (D) Y(0.0)Y(0.0)T(0.0)S(0.0)AS(0.99)GDEMVS(0.0)LK K:TMT10,s:Phosphorylated S HSP90AA1 85057.6 3 15 43.1 810.87 HUMAN 1 -0.8652 4.4694 LSADPVVSPPTSIPF-p Q5T1M5;S326-p LSADPVVSPPTSIPF 0.906665267605411 0.0940306432368947 -0.025 -0.186666666666667 0.835222476514113 13.5790247793791 -0.025 -0.186666666666667 0.825045219713608 0.0438629182148464 -0.232019180515089 -2.61443481000078 Q5T1M5 FKBP15 Q5T1M5.S326.p_FKBP15 Q5T1M5_S311sS326s_2_2_311_326 Q5T1M5 Q5T1M5|Q5T1M5-2|Q5T1M5-3 FK506-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32745.32745.4 18.46 18.46 1.25 6 2 2 0 867.1806 3305.7669 S311s S326s TMT10 306 (R) DSAAPsPIPGADNLSADPVVsPPTSIPFK (S) DS(0.0)AAPS(0.99)PIPGADNLS(0.0)ADPVVS(0.99)PPT(0.0)S(0.0)IPFK K:TMT10,s:Phosphorylated S FKBP15 134140.9 9 22 173.1 487.64 HUMAN 1 -0.8352 -13.579 LSAFGTLSPSLGNSS-p P49790-3;S240-p LSAFGTLSPSLGNSS 0.603447470538851 0.0262870555397523 -0.102 0.321 4.05103723156351 21.4794678952896 -0.102 0.321 0.393456094566041 0.00711300658035997 -0.92687292194621 4.19959501737154 P49790 NUP153 P49790.3.S240.p_NUP153 P49790-3_S240s _1_1_240_240 P49790-3 P49790|P49790-2|P49790-3 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31444.31444.3 27.73 27.73 1.768 6 1 1 0 1039.5834 3036.7701 S240s TMT10 228 (K) KPAFNLSAFGTLsPSLGNSSILK (T) KPAFNLS(0.0)AFGT(0.0)LS(0.99)PS(0.0)LGNS(0.0)S(0.0)ILK K:TMT10,s:Phosphorylated S NUP153 158989.2 9 8 64.1 696.53 HUMAN 1 -4.051 21.4795 LSAFRPWSPAVSASE-p P12755;S383-p LSAFRPWSPAVSASE 0.390105099545893 0.896104293953276 0.165 -0.0163333333333333 7.55903136307399 0.669139286420397 0.165 -0.0163333333333333 0.175427172552949 0.857207715501528 1.55855659180234 -0.188676209838937 P12755 SKI P12755.S383.p_SKI P12755_S383s _1_1_383_383 P12755 P12755 Ski oncogene HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24069.24069.3 12.51 9.06 3.396 4 1 1 0 757.736 2191.2276 S383s TMT10 376 (R) LSAFRPWsPAVSASEK (E) LS(0.0)AFRPWS(0.99)PAVS(0.0)AS(0.0)EK K:TMT10,s:Phosphorylated S SKI 81258.8 1 1 3633.1 46.5 HUMAN 1 7.559 -0.6691 LSAPHLASPPATPKA-p Q5TGY3;S1507-p LSAPHLASPPATPKA 0.405062696242559 0.537061533438633 -0.144666666666667 0.140666666666667 7.24748178199528 3.63279633405645 -0.144666666666667 0.140666666666667 0.188474162341224 0.43323183937171 -1.50426783640936 0.846119637562039 Q5TGY3 AHDC1 Q5TGY3.S1507.p_AHDC1 Q5TGY3_S1507s _1_1_1507_1507 Q5TGY3 Q5TGY3 AT-hook DNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17781.17781.3 22.67 22.67 5.585 4 1 1 0 819.7591 2377.295 S1507s TMT10 1495 (R) TEAACLSAPHLAsPPATPK (A) T(0.0)EAACLS(0.0)APHLAS(0.99)PPAT(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AHDC1 170057.9 1 19 334.1 355.89 HUMAN 1 -7.2475 3.6328 LSAPPKGSPAPAVLA-p P56181-2;S306-p LSAPPKGSPAPAVLA 0.25155486577873 0.0374083005770803 0.196666666666667 0.263 11.4345339401438 19.1740259689956 0.196666666666667 0.263 0.0718698280807575 0.0120947641259868 2.23241897732235 3.70060508101855 P56181 NDUFV3 P56181.2.S306.p_NDUFV3 P56181-2_S306s _1_1_306_306 P56181-2 P56181-2 Isoform 2 of NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17609.17609.3 11.93 11.93 3.638 3 1 1 0 848.4655 2463.3971 S306s TMT10 297 (K) SGLSAPPKGsPAPAVLAEEAR (A) S(0.0)GLS(0.0)APPKGS(0.99)PAPAVLAEEAR K:TMT10,s:Phosphorylated S NDUFV3 51040.2 1 8 1273.1 159.36 HUMAN 1 11.4345 19.174 LSARHVPSLILETKG-p Q86V21;S618-p LSARHVPSLILETKG 0.287616101143434 0.0331745595261683 -0.159666666666667 -0.291 10.2046391140258 19.9441201309305 -0.159666666666667 -0.291 0.0953973011906755 0.0101294994899287 -2.0172867635646 -3.86336597461181 Q86V21 AACS Q86V21.S618.p_AACS Q86V21_S618s _1_1_618_618 Q86V21 Q86V21|Q86V21-3 Acetoacetyl-CoA synthetase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21556.21556.3 10.38 10.38 4.225 2 1 1 0 558.991 1594.9933 S618s TMT10 615 (R) HVPsLILETK (G) HVPS(0.99)LILET(0.0)K K:TMT10,s:Phosphorylated S AACS 75713.4 1 1 6645.1 10.38 HUMAN 1 -10.2046 -19.9441 LSASPRMSGFIYQGK-p Q14155-5;S425-p LSASPRMSGFIYQGK 0.194822091031277 0.307608877709285 -0.217666666666667 0.148333333333333 13.8571566840862 6.76623734886208 -0.215249660288164 0.148333333333333 0.041141898800921 0.210560190626423 -2.66672950356477 1.41964983024176 Q14155 ARHGEF7 Q14155.5.S425.p_ARHGEF7 Q14155-5_S425s _1_1_425_425 Q14155-5 Q14155|Q14155-3|Q14155-2|Q14155-5|B1ALK7|Q14155-1|Q14155-6|E9PDQ5 Isoform 5 of Rho guanine nucleotide exchange factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28698.28907.4 20.12 16.23 6.675 6 1 1 0 711.138 2761.5599 S425s TMT10 424 (R) MsGFIYQGKLPTTGMTITK (L) MS(0.99)GFIY(0.0)QGKLPT(0.0)T(0.0)GMT(0.0)IT(0.0)K K:TMT10,s:Phosphorylated S ARHGEF7 83311.3 47 6 434.1 313.68 HUMAN 1 -13.8572 6.7662 LSDALSDTPAKSYAP-p G3V4K3;T158-p LSDALSDTPAKSYAP 0.778994381858598 0.911451390145283 0.0396666666666667 0.0143333333333333 2.08517916286248 0.56301136162536 0.0396666666666667 0.0143333333333333 0.618702803201359 0.878413221232031 0.52758402194487 0.160345943322064 G3V4K3 NotFound G3V4K3.T158.p_NotFound G3V4K3_T158t _1_1_158_158 G3V4K3 Q9H9C1|Q9H9C1-2|G3V4K3 Spermatogenesis-defective protein 39 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18800.18800.3 16.12 11.66 1.126 6 1 1 0 839.4299 2436.3135 T158t TMT10 143 (R) TRPGSFQSLSDALSDtPAK (S) T(0.0)RPGS(0.0)FQS(0.0)LS(0.0)DALS(0.0)DT(0.99)PAK K:TMT10,t:Phosphorylated T VIPAS39 59945.6 2 5 3091.1 60.94 HUMAN 1 2.0852 0.563 LSDDDIKSVFEAFGK-p Q9UHX1;S244-p LSDDDIKSVFEAFGK 0.195096445774217 0.0471401022577938 0.218666666666667 0.273666666666667 13.8424960048374 17.7492215076436 0.218666666666667 0.273666666666667 0.0412810180909575 0.0167910497825318 2.66404579620757 3.4089473002421 Q9UHX1 PUF60 Q9UHX1.S244.p_PUF60 Q9UHX1_S244s _1_1_244_244 Q9UHX1 Q9UHX1|Q9UHX1-2|Q9UHX1-5|Q9UHX1-3|Q9UHX1-6 Poly(U)-binding-splicing factor PUF60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31798.31798.4 21.26 21.26 2.368 4 1 1 0 863.4536 3370.8138 S244s TMT10 228 (R) IYVASVHQDLSDDDIKsVFEAFGK (I) IY(0.0)VAS(0.0)VHQDLS(0.0)DDDIKS(0.99)VFEAFGK K:TMT10,s:Phosphorylated S PUF60 60045.6 1 4 1450.1 140.84 HUMAN 1 13.8425 17.7492 LSDGEYISDVEEGED-p Q12955;S867-p LSDGEYISDVEEGED 0.210104564023411 0.00468697851367256 -0.265666666666667 0.731666666666667 13.0730198094566 34.0621475842579 -0.265666666666667 0.731666666666667 0.0492831001243972 0.000392450820654592 -2.52423306553881 7.75525854331936 Q12955 ANK3 Q12955.S867.p_ANK3 Q12955_S867s _1_1_867_867 Q12955 Q12955|Q12955-5 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27485.27485.3 22.22 22.22 2.575 5 1 1 0 1209.8628 3547.598 S867s TMT10 854 (K) ANAPEMLSDGEYIsDVEEGEDAMTGDTDK (Y) ANAPEMLS(0.0)DGEY(0.0)IS(0.99)DVEEGEDAMT(0.0)GDT(0.0)DK K:TMT10,s:Phosphorylated S ANK3 482683.6 1 8 135.1 530.51 HUMAN 1 -13.073 34.0621 LSDGEYISDVEEGNR-p Q12955-4;S850-p LSDGEYISDVEEGNR 0.278130997062813 0.416620827608451 0.184666666666667 0.101 10.514810203369 5.05818735622191 0.184666666666667 0.101 0.0888216792578322 0.312019160749165 2.07131004166138 1.11448315801651 Q12955 ANK3 Q12955.4.S850.p_ANK3 Q12955-4_S850s _1_1_850_850 Q12955-4 Q12955-4 Isoform 2 of Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18196.18196.3 16.54 16.54 2.087 3 1 1 0 988.1333 2882.4242 S850s TMT10 836 (R) KANAPEMLSDGEYIsDVEEGNR (C) KANAPEMLS(0.0)DGEY(0.0)IS(0.99)DVEEGNR K:TMT10,s:Phosphorylated S ANK3 205508.1 4 42 135.2 530.51 HUMAN 1 10.5148 5.0582 LSDLQDISDSERKTS-p P21127;S283-p LSDLQDISDSERKTS 0.177928026787036 0.480163061442654 -0.400333333333333 0.163 14.8526300529531 4.25212202455175 -0.400333333333334 0.163 0.0327142519961693 0.375653809649193 -2.85085724332404 0.964855403120045 P21127 CDK11B P21127.S283.p_CDK11B P21127_S283s _1_1_283_283 P21127 P21127|J3QR44|A0A0D9SEN2|Q9UQ88|A0A0D9SER5|P21127-2|B7ZVY7|P21127-3|P21127-9|J3QR29|Q5QPR4|P21127-6|P21127-10|Q9UQ88-9|Q9UQ88-2|Q9UQ88-3|Q5QPR3|P21127-8|A0A0D9SEI3|Q9UQ88-4|P21127-5|E7ESP2|J3KS35 Cyclin-dependent kinase 11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23001.23001.3 10.76 10.76 2.789 3 1 1 0 758.0534 2192.1811 S283s TMT10 274 (R) DLLSDLQDIsDSERK (T) DLLS(0.0)DLQDIS(0.99)DS(0.0)ERK K:TMT10,s:Phosphorylated S CDK11B 92876.5 2 6 421.1 320.22 HUMAN 1 -14.8526 4.2521 LSDLTIESPPNELAA-p P25054;S1664-p LSDLTIESPPNELAA 0.871481287271926 0.763553479953782 0.0363333333333333 -0.0396666666666667 1.16949769240536 1.61877024640787 0.0363333333333333 -0.0396666666666667 0.763924134390412 0.688847323585588 0.31587091587413 -0.422571204523265 P25054 APC P25054.S1664.p_APC P25054_T1661tS1664s_2_2_1661_1664 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35170.35170.4 10.16 10.16 1.759 9 2 2 0 1047.2419 4024.0059 N1650n T1661t S1664s N1667n TMT10 1641 (R) VYCVEGTPInFSTATSLSDLtIEsPPnELAAGEGVR (G) VY(0.0)CVEGT(0.0)PIN(1.0)FS(0.0)T(0.0)AT(0.0)S(0.0)LS(0.0)DLT(0.99)IES(0.99)PPN(1.0)ELAAGEGVR C:Carbamidomethylation,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S APC 313808.5 2 62 33.1 890.71 HUMAN 1 1.1695 -1.6188 LSDMELNSSSEDSKG-p O15014;S452-p LSDMELNSSSEDSKG 0.702689989895341 0.0913327387757688 -0.0653333333333333 0.234666666666667 2.88020244368264 13.7459065359007 -0.0653333333333334 0.234666666666667 0.515204628077393 0.0422094162930173 -0.695973228074066 2.64483209937763 O15014 ZNF609 O15014.S452.p_ZNF609 O15014_S452s_1_1_452_452 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11157.11157.3 14.49 14.49 1.128 5 1 1 0 888.7738 2568.343 M448m S452s TMT10 442 (K) NKPLSDmELNsSSEDSK (G) NKPLS(0.0)DM(1.0)ELNS(0.99)S(0.0)S(0.0)EDS(0.0)K K:TMT10,m:Oxidized methionine,s:Phosphorylated S ZNF609 152443.5 6 9 63.1 699.07 HUMAN 1 -2.8802 13.7459 LSDNPDFSDEADIIK-p O75717;S1041-p LSDNPDFSDEADIIK 0.265139190963317 0.126793972404298 0.163333333333333 -0.21 10.9351744988698 11.8232822770363 0.163333333333333 -0.21 0.0806273804743641 0.0657160985610356 2.14475627238108 -2.29990076468512 O75717 WDHD1 O75717.S1041.p_WDHD1 O75717_S1041s _1_1_1041_1041 O75717 O75717|O75717-2 WD repeat and HMG-box DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30778.30778.4 17.14 17.14 2.806 3 1 1 0 780.1375 3037.5552 S1041s TMT10 1031 (R) SNILSDNPDFsDEADIIKEGMIR (F) S(0.0)NILS(0.0)DNPDFS(0.99)DEADIIKEGMIR K:TMT10,s:Phosphorylated S WDHD1 127448.5 5 13 554.1 273.24 HUMAN 1 10.9352 -11.8233 LSDQATASPIVARTD-p Q5JSH3;S96-p LSDQATASPIVARTD 0.175126391202982 0.728410699208001 0.636333333333333 -0.0423333333333333 15.0624824399106 1.89531442128515 0.636333333333333 -0.0423333333333333 0.0311710732714173 0.646351197657539 2.89017804208024 -0.485436507713427 Q5JSH3 WDR44 Q5JSH3.S96.p_WDR44 Q5JSH3_S96s _1_1_96_96 Q5JSH3 Q5JSH3|Q5JSH3-2|Q5JSH3-4 WD repeat-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13765.13765.2 18.04 18.04 2.244 3 1 1 0 883.9474 1686.9224 S96s TMT10 88 (K) ELSDQATAsPIVAR (T) ELS(0.0)DQAT(0.0)AS(0.99)PIVAR s:Phosphorylated S WDR44 101935 4 5 95.1 607.92 HUMAN 1 15.0625 -1.8953 LSDSRTLSSSSMDLS-p Q9H0B6;S608-p LSDSRTLSSSSMDLS 0.408887654027387 0.0178038368389318 0.115 -0.397666666666667 7.16376589538753 24.0992012191496 0.115 -0.397666666666667 0.192142488221175 0.00389116707126675 1.48965022063459 -4.81346314753683 Q9H0B6 KLC2 Q9H0B6.S608.p_KLC2 Q9H0B6_S608s _1_1_608_608 Q9H0B6 Q9H0B6|Q9H0B6-2 Kinesin light chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14036.14036.2 11.51 4.28 1.106 6 1 1 0 746.8493 1412.7253 S608s TMT10 606 (R) TLsSSSMDLSR (R) T(0.0)LS(0.99)S(0.0)S(0.0)S(0.0)MDLS(0.0)R s:Phosphorylated S KLC2 69332.8 7 9 1131.1 174.01 HUMAN 1 7.1638 -24.0992 LSDSYSNTLPVRKSV-p I3L4C2;T373-p LSDSYSNTLPVRKSV 0.298583715457429 0.0481654416923262 0.147 0.373666666666667 9.86709096207955 17.6143614502229 0.147 0.373666666666667 0.103107653593901 0.0173206367998415 1.9586286055828 3.38194141090451 I3L4C2 BAIAP2 I3L4C2.T373.p_BAIAP2 I3L4C2_T373t _1_1_373_373 I3L4C2 I3L4C2|Q9UQB8|Q9UQB8-2|Q9UQB8-6|Q9UQB8-4|Q9UQB8-5|Q9UQB8-3 Brain-specific angiogenesis inhibitor 1-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16055.16055.3 13.61 13.61 1.261 5 1 1 0 673.3627 1938.106 T373t TMT10 366 (K) LSDSYSNtLPVRK (S) LS(0.0)DS(0.0)Y(0.0)S(0.0)NT(0.99)LPVRK K:TMT10,t:Phosphorylated T BAIAP2 61608.4 5 11 386.1 333.05 HUMAN 1 9.8671 17.6144 LSDYRRLSESQLSFR-p Q96PK6;S618-p LSDYRRLSESQLSFR 0.560712586291342 0.459225673318331 -0.116 -0.096 4.6299267778173 4.50552961083269 -0.116 -0.096 0.344355736562663 0.354361914131612 -1.03578164341799 -1.01242239642469 Q96PK6 RBM14 Q96PK6.S618.p_RBM14 Q96PK6_S618s _1_1_618_618 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14336.14336.2 11.61 6.64 10.351 3 1 1 0 766.3948 1451.8168 S618s TMT10 616 (R) RLsESQLSFR (R) RLS(0.99)ES(0.0)QLS(0.0)FR s:Phosphorylated S RBM14 69661.6 6 15 151.1 510.8 HUMAN 1 -4.6299 -4.5055 LSEAKLQSIMSFLDE-p Q9UPN4-2;S528-p LSEAKLQSIMSFLDE 0.990814303952968 0.464447669738477 0.00233333333333333 -0.0856666666666667 0.0827543704132375 4.4416923481266 0.00233333333333333 -0.0856666666666667 0.981125498966744 0.359609176223911 0.0247709501992549 -1.00048912125451 Q9UPN4 CEP131 Q9UPN4.2.S528.p_CEP131 Q9UPN4-2_S528s _1_1_528_528 Q9UPN4-2 Q9UPN4-2|I3L2J8|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.37597.37597.3 13.35 13.35 1.724 2 1 1 0 703.6859 2029.075 S528s TMT10 526 (K) LQsIMSFLDEMEK (S) LQS(0.99)IMS(0.0)FLDEMEK K:TMT10,s:Phosphorylated S CEP131 122301.7 1 18 359.1 345.98 HUMAN 1 0.0828 -4.4417 LSEDEYYSEEERNAK-p O60341;S137-p LSEDEYYSEEERNAK 0.547952287657366 0.00619660325768511 -0.134666666666667 0.567666666666667 4.82149269873559 31.8136111348851 -0.134666666666667 0.567666666666667 0.329496442615537 0.000658626023560188 -1.07124185393055 6.99149437650272 O60341 KDM1A O60341.S137.p_KDM1A O60341_S137s _1_1_137_137 O60341 O60341-2 Lysine-specific histone demethylase 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20599.20599.3 19.74 19.74 1.284 5 1 1 0 1097.1553 3209.4833 S137s TMT10 122 (R) EMDESLANLSEDEYYsEEERNAK (A) EMDES(0.0)LANLS(0.0)EDEY(0.0)Y(0.0)S(0.99)EEERNAK K:TMT10,s:Phosphorylated S KDM1A 93414.4 3 6 232.1 420.78 HUMAN 1 -4.8215 31.8136 LSEDSPNSEQDLEKL-p Q5T5P2;S1033-p LSEDSPNSEQDLEKL 0.555788016397013 0.032329563941036 0.0883333333333333 0.347666666666667 4.70992779258404 20.1103752080061 0.0883333333333333 0.347666666666667 0.338070457044421 0.00974905407285974 1.05062230345671 3.89900402672686 Q5T5P2 KIAA1217 Q5T5P2.S1033.p_KIAA1217 Q5T5P2_S1033s _1_1_1033_1033 Q5T5P2 Q5T5P2|Q5T5P2-3|Q5T5P2-7|Q5T5P2-2|Q5T5P2-9|Q5T5P2-6|Q5T5P2-8|Q5T5P2-4 Sickle tail protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18066.18078.4 22.47 22.47 1.126 3 1 1 0 817.9077 3188.6414 S1033s TMT10 1017 (R) GDAPVDKVELSEDSPNsEQDLEK (L) GDAPVDKVELS(0.0)EDS(0.0)PNS(0.99)EQDLEK K:TMT10,s:Phosphorylated S KIAA1217 214739.6 4 11 303.1 376.04 HUMAN 1 4.7099 20.1104 LSEDVSISKFFDDPM-p Q15029;S950-p LSEDVSISKFFDDPM 0.0795650721861747 0.053912882138571 -0.712333333333333 -0.36 23.4812815898137 16.908972468274 -0.712333333333333 -0.36 0.00448612986069685 0.0203752409465124 -4.66913262410166 -3.24227352316842 Q15029 EFTUD2 Q15029.S950.p_EFTUD2 Q15029_S950s _1_1_950_950 Q15029 Q15029|Q15029-3|Q15029-2 116 kDa U5 small nuclear ribonucleoprotein component HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16553.16553.3 15.39 14.93 2.77 3 1 1 0 524.9487 1492.8623 S950s TMT10 942 (K) GLSEDVSIsK (F) GLS(0.0)EDVS(0.0)IS(0.99)K K:TMT10,s:Phosphorylated S EFTUD2 110403.7 1 5 1913.1 107.79 HUMAN 1 -23.4813 -16.909 LSEEETES_______-p Q9UI30;S125-p LSEEETES_______ 0.499640884227713 0.70563937166419 0.102 0.0413333333333333 5.55416243369346 2.07973363120132 0.102 0.0413333333333333 0.278345212967735 0.61947906884415 1.20471196500169 0.526326089385587 Q9UI30 TRMT112 Q9UI30.S125.p_TRMT112 Q9UI30_S125s _1_1_125_125 Q9UI30 Q9UI30|Q9UI30-2|F5GYQ2 Multifunctional methyltransferase subunit TRM112-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28765.28765.3 16.93 16.93 3.997 3 1 1 0 619.9503 1777.8727 S125s TMT10 112 (R) GIPNMLLSEEETEs (-) GIPNMLLS(0.0)EEET(0.0)ES(0.99) s:Phosphorylated S TRMT112 14313.2 8 3 3693.1 45.14 HUMAN 1 5.5542 2.0797 LSEIKDGSLPPELSC-p Q5T1M5;S1024-p LSEIKDGSLPPELSC 0.784610264714199 0.84731953172199 0.042 0.026 2.02800372700229 1.00969661355538 0.042 0.026 0.626901959484977 0.792556694425737 0.514994773274517 0.276281707311991 Q5T1M5 FKBP15 Q5T1M5.S1024.p_FKBP15 Q5T1M5_S1024s _1_1_1024_1024 Q5T1M5 Q5T1M5|Q5T1M5-2 FK506-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20718.20718.5 17.98 14.67 2.733 5 1 1 0 790.0132 3866.0685 S1024s TMT10 1008 (R) RKGDSEAEALSEIKDGsLPPELSCIPSHR (V) RKGDS(0.0)EAEALS(0.0)EIKDGS(0.99)LPPELS(0.0)CIPS(0.0)HR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S FKBP15 134140.9 1 12 173.1 487.64 HUMAN 1 2.028 1.0097 LSEKKNKSPPADPPR-p O60566-3;S557-p LSEKKNKSPPADPPR 0.399783218903748 0.00703141473573341 -0.115333333333333 -0.486666666666667 7.34900317698585 30.8406033215229 -0.115333333333333 -0.486666666666667 0.184119455680174 0.000824023633768583 -1.52197661955684 -6.68102990895201 O60566 BUB1B O60566.3.S557.p_BUB1B O60566-3_S557s _1_1_557_557 O60566-3 O60566-3|O60566-2 Isoform 3 of Mitotic checkpoint serine/threonine-protein kinase BUB1 beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5522.5522.2 10.71 4.09 99 1 1 1 0 808.9308 1536.8898 S557s TMT10 555 (K) NKsPPADPPR (V) NKS(1.0)PPADPPR K:TMT10,s:Phosphorylated S BUB1B 122696.4 10 3 2392.1 85.47 HUMAN 1 -7.349 -30.8406 LSEQNRASPLPSGLL-p P24864;S387-p LSEQNRASPLPSGLL 0.554447962915716 0.840412671405299 -0.0806666666666667 -0.0206666666666667 4.72963140187072 1.06171155238488 -0.0806666666666667 -0.0206666666666667 0.336540131285434 0.783120954366108 -1.05427032569248 -0.289258548992914 P24864 CCNE1 P24864.S387.p_CCNE1 P24864_S387s _1_1_387_387 P24864 P24864|P24864-3|P24864-2|C9J2U0 G1/S-specific cyclin-E1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20547.20547.4 16.43 10.96 2.186 5 1 1 0 844.4678 3294.8811 S387s TMT10 378 (K) AMLSEQNRAsPLPSGLLTPPQSGKK (Q) AMLS(0.0)EQNRAS(0.99)PLPS(0.0)GLLT(0.0)PPQS(0.0)GKK K:TMT10,s:Phosphorylated S CCNE1 47646.9 5 3 1915.1 107.57 HUMAN 1 -4.7296 -1.0617 LSEWSGRSPSSLLIA-p Q658Y4;S826-p LSEWSGRSPSSLLIA 0.51748982283609 0.810814348420404 -0.0866666666666667 0.0243333333333334 5.28332797008278 1.27697204087513 -0.0866666666666667 0.0243333333333334 0.296256032896926 0.745251392035167 -1.15573521582032 0.341945153516636 Q658Y4 FAM91A1 Q658Y4.S826.p_FAM91A1 Q658Y4_S826s _1_1_826_826 Q658Y4 Q658Y4 Protein FAM91A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32876.32876.4 15.09 15.09 1.152 5 1 1 0 697.8613 2708.4569 S826s TMT10 816 (K) DGVLSEWSGRsPSSLLIANLHLQ (-) DGVLS(0.0)EWS(0.0)GRS(0.99)PS(0.0)S(0.0)LLIANLHLQ s:Phosphorylated S FAM91A1 94706.1 4 5 1143.1 172.97 HUMAN 1 -5.2833 1.277 LSFAEDISADEDDQI-p Q14684;S350-p LSFAEDISADEDDQI 0.937002050600476 0.6356679453922 0.0116666666666667 0.0536666666666667 0.54902503408086 2.67811355884988 0.0116666666666667 0.0536666666666667 0.881246685572236 0.539745020177163 0.156587168204082 0.654152985783534 Q14684 RRP1B Q14684.S350.p_RRP1B Q14684_S350s _1_1_350_350 Q14684 Q14684|Q14684-2 Ribosomal RNA processing protein 1 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28561.29156.4 28.09 28.09 5.278 7 1 1 0 1089.542 4275.1759 S350s TMT10 330 (K) KFQDLSEGSSISQLSFAEDIsADEDDQILSQGK (H) KFQDLS(0.0)EGS(0.0)S(0.0)IS(0.0)QLS(0.0)FAEDIS(0.99)ADEDDQILS(0.0)QGK K:TMT10,s:Phosphorylated S RRP1B 84825.4 52 2 473.1 301.95 HUMAN 1 0.549 2.6781 LSFATCKS_______-p Q9NYP9;S233-p LSFATCKS_______ 0.192059131883792 0.219225065426382 0.202333333333333 -0.14 13.9902135901876 8.67639079176044 0.202333333333333 -0.14 0.039900527841767 0.13563161118515 2.69112185983644 -1.75173987633463 Q9NYP9 MIS18A Q9NYP9.S233.p_MIS18A Q9NYP9_S233s _1_1_233_233 Q9NYP9 Q9NYP9 Protein Mis18-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18085.18085.3 13.67 13.67 4.41 3 1 1 0 484.5833 1371.7706 S233s TMT10 226 (K) LSFATCKs (-) LS(0.0)FAT(0.0)CKS(0.99) C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MIS18A 26833 3 6 1982.1 104.28 HUMAN 1 13.9902 -8.6764 LSFQDDDSISRKKSY-p Q8TEP8-3;S98-p LSFQDDDSISRKKSY 0.942710049524684 0.00344018797532572 0.0143333333333333 -0.733333333333333 0.504815914514113 36.8308513843802 0.0143333333333333 -0.733333333333333 0.890263173017756 0.000207450679439301 0.144595567072961 -8.79329137366577 Q8TEP8 NotFound Q8TEP8.3.S98.p_NotFound Q8TEP8-3_S92sS98s_2_2_92_98 Q8TEP8-3 Q8TEP8-3 Isoform 3 of Centrosomal protein of 192 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20481.20481.4 11.75 11.75 1.525 3 2 2 0 657.5911 2467.4124 S92s S98s TMT10 89 (R) LQLsFQDDDsISRKK (S) LQLS(0.99)FQDDDS(0.99)IS(0.0)RKK K:TMT10,s:Phosphorylated S CEP192 281787.5 1 20 491.1 293.99 HUMAN 1 0.5048 -36.8309 LSFQNPVYHLNNPIP-p Q9UJF2-2;Y927-p LSFQNPVYHLNNPIP 0.159381287579703 0.851381508260759 -0.439333333333333 -0.0569999999999999 15.9776970750936 0.982359892115053 -0.439333333333333 -0.0569999999999999 0.0252481924856829 0.797561186522522 -3.06390905993699 -0.269421246410252 Q9UJF2 RASAL2 Q9UJF2.2.Y927.p_RASAL2 Q9UJF2-2_Y927y _1_1_927_927 Q9UJF2-2 Q9UJF2-2 Isoform 2 of Ras GTPase-activating protein nGAP GG20160819_MSz_CCLE_T4D7_pY_Injection_02.29704.29704.5 23.09 19.22 2.071 2 1 1 0 859.6621 4214.3214 Y927y TMT10 905 (R) RPLHPALNQPGGLQPLSFQNPVyHLNNPIPAMPK (A) RPLHPALNQPGGLQPLS(0.0)FQNPVY(0.99)HLNNPIPAMPK K:TMT10,y:Phosphorylated Y RASAL2 145265.6 2 1 142.1 23.09 HUMAN 1 -15.9777 -0.9824 LSFQNPVYQMAAGLP-p Q5VWQ8;Y833-p LSFQNPVYQMAAGLP 0.320451025769791 0.551576468535321 -0.362666666666667 -0.125333333333333 9.25075539728832 3.47960991758715 -0.362666666666667 -0.125333333333333 0.118829552131426 0.448785697962215 -1.85177888648292 -0.816125480222237 Q5VWQ8 DAB2IP Q5VWQ8.Y833.p_DAB2IP Q5VWQ8_Y833y_1_1_833_833 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.36850.36850.4 27.12 24.63 11.03 8 1 1 0 1185.8645 4659.4667 N830n Y833y TMT10 802 (R) RAGQTPTTPGTSEGAPGRPQLLAPLSFQnPVyQMAAGLPLSPR (G) RAGQT(0.0)PT(0.0)T(0.0)PGT(0.0)S(0.0)EGAPGRPQLLAPLS(0.0)FQN(1.0)PVY(0.99)QMAAGLPLS(0.0)PR n:Deamidated,y:Phosphorylated Y DAB2IP 132592.9 3 1 39.1 52.7 HUMAN 1 -9.2508 -3.4796 LSGANLTSPRVPLSA-p Q9UQ35;S2382-p LSGANLTSPRVPLSA 0.858574991569073 0.248544349090413 -0.027 -0.175333333333333 1.29094527487798 7.96515773454616 -0.027 -0.175333333333333 0.742857431744996 0.159765950145679 -0.345346810102666 -1.6286019719363 Q9UQ35 SRRM2 Q9UQ35.S2382.p_SRRM2 Q9UQ35_S2382s _1_1_2382_2382 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18223.18223.3 11.11 11.11 1.12 3 1 1 0 565.6221 1614.8835 S2382s TMT10 2371 (R) MAPALSGANLTsPR (V) MAPALS(0.0)GANLT(0.0)S(0.99)PR s:Phosphorylated S SRRM2 300351.7 5 153 2.1 3310.34 HUMAN 1 -1.2909 -7.9652 LSGEGKGSTDDEAED-p O95180;S1174-p LSGEGKGSTDDEAED 0.506609842161293 0.114269099239299 0.108666666666667 0.201666666666667 5.44767359080342 12.4250516668515 0.108666666666667 0.201666666666667 0.285254589729912 0.0572130148132676 1.1855008479769 2.40671061107363 O95180 CACNA1H O95180.S1174.p_CACNA1H O95180_S1174sT1175t_2_2_1174_1175 O95180 O95180|O95180-2|A0A1W2PR14|A0A1W2PQW2 Voltage-dependent T-type calcium channel subunit alpha-1H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15536.15536.3 8.31 8.31 8.311 4 2 2 0 890.7224 2510.2258 S1174s T1175t TMT10 1164 (R) ESLLSGEGKGstDDEAEDGR (A) ES(0.0)LLS(0.0)GEGKGS(0.99)T(0.99)DDEAEDGR K:TMT10,s:Phosphorylated S,t:Phosphorylated T CACNA1H 262353.2 1 3 5013.1 23.9 HUMAN 1 5.4477 12.4251 LSGERRYSMPPLFHT-p Q6PIY7;S116-p LSGERRYSMPPLFHT 0.729757185802638 0.176602847401056 -0.0503333333333333 0.169 2.59528892466204 9.90348426911096 -0.0503333333333333 0.169 0.55013732010863 0.102247235134358 -0.636939997331836 1.96416148711331 Q6PIY7 PAPD4 Q6PIY7.S116.p_PAPD4 Q6PIY7_S116s _1_1_116_116 Q6PIY7 Q6PIY7|Q6PIY7-2|D6RAF2 Poly(A) RNA polymerase GLD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21897.21897.4 10.65 10.65 1.895 4 1 1 0 635.0758 2457.3063 S116s TMT10 114 (R) RYsMPPLFHTHYVPDIVR (C) RY(0.0)S(0.99)MPPLFHT(0.0)HY(0.0)VPDIVR s:Phosphorylated S PAPD4 56540.1 1 3 3027.1 62.87 HUMAN 1 -2.5953 9.9035 LSGKRMQSLSLNK__-p Q13442;S176-p LSGKRMQSLSLNK__ 0.887259194808546 0.0178095335856241 0.0306666666666666 -0.511 1.01392164106787 24.0926256978357 0.0306666666666666 -0.511 0.79178603173507 0.00389706303188696 0.277366888107024 -4.81185342146819 Q13442 PDAP1 Q13442.S176.p_PDAP1 Q13442_S176s _1_1_176_176 Q13442 Q13442 28 kDa heat- and acid-stable phosphoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13713.13713.3 7.21 7.21 1.12 2 1 1 0 538.9655 1534.914 S176s TMT10 173 (K) RMQsLSLNK (-) RMQS(0.99)LS(0.0)LNK K:TMT10,s:Phosphorylated S PDAP1 20629.7 1 4 1837.1 111.85 HUMAN 1 1.0139 -24.0926 LSGNSNSSGSESFKF-p Q99590;S1110-p LSGNSNSSGSESFKF 0.26956048078314 0.866163505582597 0.191666666666667 -0.038 10.7892576273909 0.879142434810882 0.191666666666667 -0.038 0.0833823704269738 0.816743631007969 2.1192286163174 -0.243258055624287 Q99590 SCAF11 Q99590.S1110.p_SCAF11 Q99590_S1110s _1_1_1110_1110 Q99590 Q99590|F8VXG7|Q99590-2 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12304.12304.3 9.24 9.24 1.194 6 1 1 0 798.4166 2313.2654 S1110s TMT10 1101 (R) KPLSGNSNSsGSESFK (F) KPLS(0.0)GNS(0.0)NS(0.0)S(0.99)GS(0.0)ES(0.0)FK K:TMT10,s:Phosphorylated S SCAF11 166418 1 24 120.1 549.85 HUMAN 1 10.7893 -0.8791 LSGPSQESPQTLGKE-p Q9BWE0-4;S84-p LSGPSQESPQTLGKE 0.790994687483034 0.0340592353542532 0.0493333333333333 -0.3 1.96564270872794 19.7797985378093 0.0493333333333333 -0.3 0.635968681405925 0.0105201067376614 0.501179857108565 -3.82831924947237 Q9BWE0 REPIN1 Q9BWE0.4.S84.p_REPIN1 Q9BWE0-4_S84s _1_1_84_84 Q9BWE0-4 Q9BWE0-4 Isoform 2 of Replication initiator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20413.20413.3 13.57 13.57 2.635 4 1 1 0 694.0434 2000.1428 S84s TMT10 76 (R) LLSGPSQEsPQTLGK (E) LLS(0.0)GPS(0.0)QES(0.99)PQT(0.0)LGK K:TMT10,s:Phosphorylated S REPIN1 72029.9 2 1 6156.1 13.57 HUMAN 1 1.9656 -19.7798 LSHFQSGSPPAPNGF-p Q70EK8;S492-p LSHFQSGSPPAPNGF 0.138406999744561 0.0121823685227626 -0.377666666666667 -0.383666666666667 17.5917919032485 26.7278994145921 -0.377666666666667 -0.383666666666667 0.0174108835042651 0.00212427167632341 -3.3801178822088 -5.48766341963972 Q70EK8 USP53 Q70EK8.S492.p_USP53 Q70EK8_S492s _1_1_492_492 Q70EK8 Q70EK8 Inactive ubiquitin carboxyl-terminal hydrolase 53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23778.23778.4 16.61 16.61 1.174 3 1 1 0 724.6058 2815.4303 S492s TMT10 479 (R) DLVDEDLSHFQSGsPPAPNGFK (Q) DLVDEDLS(0.0)HFQS(0.0)GS(0.99)PPAPNGFK K:TMT10,s:Phosphorylated S USP53 122744 6 1 3358.1 52.94 HUMAN 1 -17.5918 -26.7279 LSHGRTCSFGGFDLT-p O94885;S407-p LSHGRTCSFGGFDLT 0.524959390630027 0.377772271451687 -0.152666666666667 -0.156333333333333 5.17993228497765 5.61536008035036 -0.152666666666667 -0.156333333333333 0.303393848887336 0.274450478285908 -1.13693172464622 -1.21545469130378 O94885 SASH1 O94885.S407.p_SASH1 O94885_S407s _1_1_407_407 O94885 O94885 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20998.20998.2 11.13 11.13 2.605 3 1 1 0 842.3744 1603.7736 S407s TMT10 405 (R) TCsFGGFDLTNR (S) T(0.0)CS(0.99)FGGFDLT(0.0)NR C:Carbamidomethylation,s:Phosphorylated S SASH1 137734.8 2 7 295.1 379.69 HUMAN 1 -5.1799 -5.6154 LSHLDPNSPMREEKK-p Q9BXF3;S422-p LSHLDPNSPMREEKK 0.544947039505364 0.055423999854699 -0.0913333333333333 0.233 4.86801673283497 16.7381684603003 -0.0913333333333333 0.233 0.325985532919679 0.0211925469501425 -1.0798150580837 3.20884304982548 Q9BXF3 CECR2 Q9BXF3.S422.p_CECR2 Q9BXF3_S422s _1_1_422_422 Q9BXF3 Q9BXF3|Q9BXF3-3|A0A087WT21|A0A0R4J2E1|B7WPH3|Q9BXF3-2 Cat eye syndrome critical region protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19690.19690.4 15.35 15.35 2.799 2 1 1 0 689.85 2676.4067 S422s TMT10 410 (K) ELPPELSHLDPNsPMREEK (K) ELPPELS(0.0)HLDPNS(0.99)PMREEK K:TMT10,s:Phosphorylated S CECR2 165636.6 3 2 2674.1 74.3 HUMAN 1 -4.868 16.7382 LSHSRKFSAACNFSN-p Q7L9B9;S25-p LSHSRKFSAACNFSN 0.593686393732298 0.923888111942964 -0.0776666666666667 -0.00966666666666662 4.17583984410424 0.485626256461015 -0.0776666666666667 -0.00966666666666662 0.382310314862011 0.894205577404699 -0.950595819946643 -0.139347160111814 Q7L9B9 EEPD1 Q7L9B9.S25.p_EEPD1 Q7L9B9_S25s _1_1_25_25 Q7L9B9 Q7L9B9 Endonuclease/exonuclease/phosphatase family domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23915.23915.4 19.29 22.45 6.354 2 1 1 0 634.8227 2456.312 S25s TMT10 23 (R) KFsAACNFSNILVNQER (L) KFS(0.99)AACNFS(0.0)NILVNQER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S EEPD1 62857.9 4 1 2305.1 88.81 HUMAN 1 -4.1758 -0.4856 LSIRRTNSSEQERTG-p Q9Y2I8-2;S30-p LSIRRTNSSEQERTG 0.741269599386783 0.812475137314767 0.0816666666666667 -0.0676666666666667 2.46818835148061 1.26453828395207 0.0816666666666667 -0.0676666666666666 0.566475543608045 0.74738808782141 0.610158932745554 -0.338944517129397 Q9Y2I8 WDR37 Q9Y2I8.2.S30.p_WDR37 Q9Y2I8-2_S30s _1_1_30_30 Q9Y2I8-2 Q9Y2I8-2|Q9Y2I8-3|A0A087WTQ2|E7EQ49 Isoform 2 of WD repeat-containing protein 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2564.2564.2 10.77 4.49 1.104 3 1 1 0 630.2767 1179.5803 S30s TMT10 28 (R) TNsSEQER (T) T(0.0)NS(0.99)S(0.0)EQER s:Phosphorylated S WDR37 55477.2 3 3 2625.1 76.51 HUMAN 1 2.4682 -1.2645 LSISGKRSAPGGGSK-p P06748;S143-p LSISGKRSAPGGGSK 0.854621870598403 0.328751203387295 -0.032 -0.127 1.32458512708018 6.39697994499401 -0.032 -0.127 0.737125588122657 0.229246126095864 -0.353425984116887 -1.35464491775061 P06748 NPM1 P06748.S143.p_NPM1 P06748_S143s _1_1_143_143 P06748 P06748|P06748-2|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6721.6721.3 18.25 18.25 14.623 2 1 1 0 550.971 1570.9317 S143s Hydrogen 143 (R) sAPGGGSKVPQK (K) S(0.99)APGGGS(0.0)KVPQK K:TMT10-Lys-Only,s:Phosphorylated S NPM1 32745.6 8 10 78.1 640.75 HUMAN 1 -1.3246 -6.397 LSKADTSSAENILYT-p Q13796;S231-p LSKADTSSAENILYT 0.981281974066241 0.121827505868407 0.00366666666666666 0.2 0.163602137184239 12.0579197746771 0.00366666666666666 0.2 0.963029933353541 0.0622598431921442 0.0485363112909249 2.3414372298529 Q13796 SHROOM2 Q13796.S231.p_SHROOM2 Q13796_S231s _1_1_231_231 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35059.35059.2 17.38 17.38 1.167 5 1 1 0 1251.6077 2422.2452 S231s TMT10 227 (K) ADTSsAENILYTVGLWEAPR (Q) ADT(0.0)S(0.0)S(0.99)AENILY(0.0)T(0.0)VGLWEAPR s:Phosphorylated S SHROOM2 177605.1 5 4 90.1 622.62 HUMAN 1 0.1636 12.0579 LSKAPDGYIVKSQHS-p Q92499;Y265-p LSKAPDGYIVKSQHS 0.895479908278382 0.0738676280290686 0.021 0.225 0.937779530800268 15.0206641863094 0.021 0.225 0.805790321925766 0.0314726695144036 0.258197422178074 2.88044486942102 Q92499 DDX1 Q92499.Y265.p_DDX1 Q92499_Y265y _1_1_265_265 Q92499 Q92499|F1T0B3|A0A087X2G1|Q92499-2|Q92499-3 ATP-dependent RNA helicase DDX1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.16708.16708.2 9.54 1.98 99 1 1 1 0 700.8842 1320.7928 Y265y TMT10 261 (K) APDGyIVK (S) APDGY(1.0)IVK K:TMT10,y:Phosphorylated Y DDX1 83400.6 2 1 356.1 9.54 HUMAN 1 0.9378 15.0207 LSKASPNTRSGTRRS-p Q14980;T2080-p LSKASPNTRSGTRRS 0.17909935093331 0.000952253650599092 1.03166666666667 -1.45366666666667 14.7491826703787 56.7393290646269 1.03166666666667 -1.45366666666667 0.0335028484614445 2.11868842313024e-06 2.83154120619386 -20.9783090186723 Q14980 NUMA1 Q14980.T2080.p_NUMA1 Q14980_T2080t _1_1_2080_2080 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6594.6594.4 8.89 8.89 2.141 3 1 1 0 485.7866 1860.1634 T2080t TMT10 2071 (K) KALSKASPNtR (S) KALS(0.0)KAS(0.0)PNT(0.99)R K:TMT10,t:Phosphorylated T NUMA1 239339.3 1 38 31.1 900.97 HUMAN 1 14.7492 -56.7393 LSKDPVESPAKKQPK-p Q9Y4F3;S1718-p LSKDPVESPAKKQPK 0.953827977209859 0.104651106694341 -0.0176666666666667 -0.189666666666667 0.401777707754042 12.9522548439292 -0.0176666666666667 -0.189666666666667 0.911637600221923 0.0506727548540786 -0.116262368426134 -2.5011008169495 Q9Y4F3 KIAA0430 Q9Y4F3.S1718.p_KIAA0430 Q9Y4F3_S1718s _1_1_1718_1718 Q9Y4F3 Q9Y4F3|Q9Y4F3-5|Q9Y4F3-4 Meiosis regulator and mRNA stability factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25739.25739.4 17.94 17.94 1.812 15 1 1 0 1218.8549 4792.4363 S1718s TMT10 1682 (K) TLTSDSSSSCISAAVPVPPCPSSETSESLLSKDPVEsPAK (K) T(0.0)LT(0.0)S(0.0)DS(0.0)S(0.0)S(0.0)S(0.0)CIS(0.0)AAVPVPPCPS(0.0)S(0.0)ET(0.0)S(0.0)ES(0.0)LLS(0.0)KDPVES(0.99)PAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MARF1 195936.7 1 7 1655.1 123.29 HUMAN 1 -0.4018 -12.9523 LSKDQSGSEREDSLT-p Q9UBY0;S775-p LSKDQSGSEREDSLT 0.512047080261968 0.614794718841381 -0.248 -0.091 5.37527867328828 2.87105928879545 -0.248 -0.091 0.290049507695601 0.51629042538184 -1.17240691673582 -0.6940040277783 Q9UBY0 SLC9A2 Q9UBY0.S775.p_SLC9A2 Q9UBY0_S773sS775s_2_2_773_775 Q9UBY0 Q9UBY0 Sodium/hydrogen exchanger 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23073.23073.5 13.54 8.99 1.115 8 2 2 0 959.0995 4631.5248 S773s S775s TMT10 756 (K) GTQTSGLLQQPLLSKDQsGsEREDSLTEGIPPKPPPR (L) GT(0.0)QT(0.0)S(0.0)GLLQQPLLS(0.0)KDQS(0.99)GS(0.99)EREDS(0.0)LT(0.0)EGIPPKPPPR K:TMT10,s:Phosphorylated S SLC9A2 92088.6 1 15 1290.1 157.7 HUMAN 1 -5.3753 -2.8711 LSKKRRVSGPDPKPG-p P22314;S13-p LSKKRRVSGPDPKPG 0.960524635869147 0.753571722411086 -0.008 0.032 0.335803574532479 1.69763116934186 -0.00799999999999999 0.032 0.925592107084625 0.676451840988174 -0.0978257582594128 0.440699474654144 P22314 UBA1 P22314.S13.p_UBA1 P22314_S13s_1_1_13_13 P22314 P22314 Ubiquitin-like modifier-activating enzyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23004.23004.5 31.42 21.83 1.051 10 1 1 0 1125.9554 5544.7942 S13s N44n TMT10 11 (R) RVsGPDPKPGSNCSPAQSVLSEVPSVPTNGMAKnGSEADIDEGLYSR (Q) RVS(0.99)GPDPKPGS(0.0)N(0.0)CS(0.0)PAQS(0.0)VLS(0.0)EVPS(0.0)VPT(0.0)N(0.50)GMAKN(0.50)GS(0.0)EADIDEGLY(0.0)S(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated UBA1 118930.9 120 2 289.1 381.86 HUMAN 1 -0.3358 1.6976 LSKPEMGSPRALVGG-p Q9BY89;S366-p LSKPEMGSPRALVGG 0.126572282263763 0.00129606731851265 -0.304 -1.077 18.6280958452474 47.0909410679205 -0.304 -1.077 0.0137148295809303 1.95391601799409e-05 -3.59051409176973 -13.8316027399188 Q9BY89 KIAA1671 Q9BY89.S366.p_KIAA1671 Q9BY89_S366s _1_1_366_366 Q9BY89 Q9BY89 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14007.14007.3 10.96 6.81 5.927 2 1 1 0 590.9729 1690.9385 S366s TMT10 358 (K) MLSKPEMGsPR (A) MLS(0.0)KPEMGS(0.99)PR K:TMT10,s:Phosphorylated S KIAA1671 197734.4 2 6 105.1 590.35 HUMAN 1 -18.6281 -47.0909 LSKQKKFTPERNPIT-p Q96AV8;T61-p LSKQKKFTPERNPIT 0.421140316027267 0.000952253650599092 -0.151 -1.56033333333333 6.91764691535993 58.2372992276703 -0.151 -1.56033333333333 0.203345847643225 1.5006177432714e-06 -1.44658990200178 -22.370397548314 Q96AV8 E2F7 Q96AV8.T61.p_E2F7 Q96AV8_T61t _1_1_61_61 Q96AV8 Q96AV8|Q96AV8-3|Q96AV8-2 Transcription factor E2F7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14605.14605.4 12.11 10.29 2.679 2 1 1 0 574.3363 2214.3577 T61t TMT10 59 (K) KFtPERNPITPVK (F) KFT(0.99)PERNPIT(0.0)PVK K:TMT10,t:Phosphorylated T E2F7 100342.7 2 1 2042.1 101.08 HUMAN 1 -6.9176 -58.2373 LSKQPLFSPETRRTV-p Q9BQ89;S78-p LSKQPLFSPETRRTV 0.283344302362655 0.0212880102616323 0.365 -0.369333333333333 10.3438100395958 22.864853433044 0.365 -0.369333333333333 0.0923887297484091 0.00517028706508328 2.04151047242407 -4.51753018338037 Q9BQ89 FAM110A Q9BQ89.S78.p_FAM110A Q9BQ89_S78s _1_1_78_78 Q9BQ89 Q9BQ89 Protein FAM110A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10912.10912.3 9.69 9.69 4.025 2 1 1 0 513.9345 1459.8219 S78s TMT10 74 (K) QPLFsPETRR (T) QPLFS(0.99)PET(0.0)RR s:Phosphorylated S FAM110A 31612.3 1 1 2320.1 87.91 HUMAN 1 10.3438 -22.8649 LSKTEFLSFMNTELA-p P31949;S41-p LSKTEFLSFMNTELA 0.941250546674147 0.00228267556193667 0.0133333333333333 0.749333333333333 0.517021374843439 40.7802859960945 0.0133333333333333 0.749333333333334 0.887764680054413 8.35547993048773e-05 0.147915928897916 10.4879551312269 P31949 S100A11 P31949.S41.p_S100A11 P31949_S41s _1_1_41_41 P31949 P31949 Protein S100-A11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37295.37295.3 15.2 15.2 3.032 4 1 1 0 796.7369 2308.2299 S41s TMT10 37 (K) TEFLsFMNTELAAFTK (N) T(0.0)EFLS(0.99)FMNT(0.0)ELAAFT(0.0)K K:TMT10,s:Phosphorylated S S100A11 11854.4 1 2 2333.1 87.44 HUMAN 1 0.517 40.7803 LSKYIDKTIRVKFQG-p Q9UK45;T22-p LSKYIDKTIRVKFQG 0.183588448303514 0.00785510684274112 0.221 1.04766666666667 14.4772069021362 30.0256718071577 0.221 1.04766666666667 0.0356680453199528 0.000994106284438626 2.78096379223335 6.42973505092213 Q9UK45 LSM7 Q9UK45.T22.p_LSM7 Q9UK45_T22t _1_1_22_22 Q9UK45 Q9UK45|K7ENY5 U6 snRNA-associated Sm-like protein LSm7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12248.12248.3 7.46 2.93 7.459 2 1 1 0 482.9424 1366.8459 T22t TMT10 18 (K) YIDKtIR (V) Y(0.0)IDKT(0.99)IR K:TMT10,t:Phosphorylated T LSM7 11716.3 1 2 5370.1 20.01 HUMAN 1 14.4772 30.0257 LSLADALTEPSPDIE-p E7EVA0;T11-p LSLADALTEPSPDIE 0.232669571959978 0.0439142137599872 -0.189333333333333 0.268333333333333 12.1712924911773 18.1826833231011 -0.189333333333333 0.268333333333333 0.0606555787420631 0.0151960833748509 -2.36275442721016 3.49643251614825 E7EVA0 NotFound E7EVA0.T11.p_NotFound E7EVA0_T11t _1_1_11_11 E7EVA0 E7EVA0 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29073.29073.3 7.93 7.93 1.18 3 1 1 0 897.7833 2611.3664 T11t Acetyl 2 (M) ADLSLADALtEPSPDIEGEIKR (D) ADLS(0.0)LADALT(0.99)EPS(0.0)PDIEGEIKR K:TMT10,t:Phosphorylated T MAP4 246695.2 3 1 38.1 865.62 HUMAN 1 -12.1713 18.1827 LSLAKSVSTTNIAGH-p V9GYM8;S196-p LSLAKSVSTTNIAGH 0.203825485912988 0.875648883711891 0.226333333333333 0.0156666666666667 13.3825893401296 0.810998915034745 0.226333333333333 0.0156666666666667 0.045892431250109 0.82965991657866 2.58024146078552 0.225751884147845 V9GYM8 NotFound V9GYM8.S196.p_NotFound V9GYM8_S196s _1_1_196_196 V9GYM8 V9GYM8|Q92974|Q92974-2|Q92974-3 Rho guanine nucleotide exchange factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18167.18167.3 16.19 10.02 1.136 5 1 1 0 860.7641 2500.3106 S196s TMT10 194 (K) SVsTTNIAGHFNDESPLGLRR (I) S(0.0)VS(0.99)T(0.0)T(0.0)NIAGHFNDES(0.0)PLGLRR s:Phosphorylated S ARHGEF2 117095.6 4 10 380.1 335.31 HUMAN 1 13.3826 0.811 LSLCFEGSPRVAKES-p Q96JQ2;S449-p LSLCFEGSPRVAKES 0.390164641682555 0.0509179768383229 -0.131666666666667 -0.283333333333333 7.55716312073267 17.2679485767688 -0.131666666666667 -0.283333333333333 0.175502653819425 0.0187588038528565 -1.55823151163552 -3.31302290498519 Q96JQ2 CLMN Q96JQ2.S449.p_CLMN Q96JQ2_S449s _1_1_449_449 Q96JQ2 Q96JQ2 Calmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20089.20089.3 16.14 16.14 8.96 2 1 1 0 530.2513 1508.7729 S449s TMT10 441 (K) NLSLCFEGsPR (V) NLS(0.0)LCFEGS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S CLMN 112105.2 2 7 726.1 236.61 HUMAN 1 -7.5572 -17.2679 LSLGLDDSRTNTPQG-p Q14004-2;S1054-p LSLGLDDSRTNTPQG 0.191102046396083 0.0128060942428854 0.218 0.720666666666667 14.0484728767487 26.3713210864772 0.218 0.720666666666667 0.0393688485031276 0.0023060456027702 2.70182253840977 5.3924702749401 Q14004 CDK13 Q14004.2.S1054.p_CDK13 Q14004-2_S1054s _1_1_1054_1054 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24491.24491.3 15.98 10.81 1.171 6 1 1 0 1027.2107 2999.6414 S1054s TMT10 1046 (K) DLSLGLDDsRTNTPQGVLPSSQLK (S) DLS(0.0)LGLDDS(0.99)RT(0.0)NT(0.0)PQGVLPS(0.0)S(0.0)QLK K:TMT10,s:Phosphorylated S CDK13 159173.6 7 14 145.1 520.12 HUMAN 1 14.0485 26.3713 LSLGQGDSTEAATEE-p Q6ZRV2;S1009-p LSLGQGDSTEAATEE 0.208094276358716 0.781069271605715 0.192666666666667 -0.0283333333333333 13.1515191529664 1.48495334221022 0.192666666666667 -0.0283333333333333 0.0484003034725781 0.71040280207012 2.53840605218838 -0.391417262243907 Q6ZRV2 FAM83H Q6ZRV2.S1009.p_FAM83H Q6ZRV2_S1009s _1_1_1009_1009 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11945.11945.3 18.93 18.93 1.261 4 1 1 0 761.6988 2203.1152 S1009s TMT10 1002 (R) LSLGQGDsTEAATEERGPR (A) LS(0.0)LGQGDS(0.99)T(0.0)EAAT(0.0)EERGPR s:Phosphorylated S FAM83H 127633.5 4 29 7.1 1347.23 HUMAN 1 13.1515 -1.485 LSLKAHQSESYLPIG-p O75815;S338-p LSLKAHQSESYLPIG 0.152674112948986 0.00283723921668958 0.504333333333333 0.695333333333333 16.4132561522189 38.5338902436829 0.504333333333333 0.695333333333333 0.0228388580247838 0.000140155768039058 3.14794741586216 9.49108646308798 O75815 BCAR3 O75815.S338.p_BCAR3 O75815_S338s _1_1_338_338 O75815 O75815|O75815-3|O75815-2 Breast cancer anti-estrogen resistance protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15228.15228.2 17.53 17.53 2.201 3 1 1 0 1014.5053 1948.0363 S338s TMT10 335 (K) AHQsESYLPIGCK (L) AHQS(0.99)ES(0.0)Y(0.0)LPIGCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BCAR3 93533.8 6 8 401.1 327.42 HUMAN 1 16.4133 38.5339 LSLLKQESPAPEPPT-p O14686-3;S4886-p LSLLKQESPAPEPPT 0.357240730154934 0.148586801495501 0.147333333333333 0.167333333333333 8.30835965095041 10.8999487286669 0.147333333333333 0.167333333333333 0.147626401929454 0.0812840112222051 1.68861491115284 2.13763661880538 O14686 KMT2D O14686.3.S4886.p_KMT2D O14686-3_S4886s _1_1_4886_4886 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30026.30026.5 24.46 18.26 4.616 9 1 1 0 876.4532 4298.2709 S4886s TMT10 4874 (K) SQLDILSLLKQEsPAPEPPTQHSYTYNVSNLDVR (Q) S(0.0)QLDILS(0.0)LLKQES(0.99)PAPEPPT(0.0)QHS(0.0)Y(0.0)T(0.0)Y(0.0)NVS(0.0)NLDVR K:TMT10,s:Phosphorylated S KMT2D 600227.3 3 46 17.1 1042.08 HUMAN 1 8.3084 10.8999 LSLNTPNSNRKRRRL-p Q9H8V3;S376-p LSLNTPNSNRKRRRL 0.391439384500192 0.0106067247040203 0.201 -0.396333333333333 7.50995999133391 27.6924269014771 0.201 -0.396333333333333 0.177420582539474 0.00170120758289126 1.55001627680836 -5.75141994101906 Q9H8V3 ECT2 Q9H8V3.S376.p_ECT2 Q9H8V3_S376s _1_1_376_376 Q9H8V3 Q9H8V3-3|Q9H8V3-4|Q9H8V3-2 Protein ECT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19440.19440.3 12.34 12.34 2.375 5 1 1 0 610.3002 1748.9162 S376s TMT10 365 (K) SVSMLSLNTPNsNR (K) S(0.0)VS(0.0)MLS(0.0)LNT(0.0)PNS(0.99)NR s:Phosphorylated S ECT2 104530 3 8 572.1 269.2 HUMAN 1 7.51 -27.6924 LSLPHQASPVSRTPS-p O75925-2;S505-p LSLPHQASPVSRTPS 0.338652357949054 0.881458589527084 -0.164333333333333 0.015 8.7473169493866 0.770468951331156 -0.164333333333333 0.015 0.133434552988498 0.837438850568638 -1.76462315301945 0.215248084877407 O75925 PIAS1 O75925.2.S505.p_PIAS1 O75925-2_S505s _1_1_505_505 O75925-2 O75925-2 Isoform 2 of E3 SUMO-protein ligase PIAS1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16521.16521.3 16.74 13 2.565 3 1 1 0 590.987 1690.9802 S505s TMT10 496 (K) GILSLPHQAsPVSR (T) GILS(0.0)LPHQAS(0.99)PVS(0.0)R s:Phosphorylated S PIAS1 73172.1 5 3 3137.1 59.72 HUMAN 1 -8.7473 0.7705 LSLPRASSLNENVDH-p D3DTX6;S100-p LSLPRASSLNENVDH 0.231415378144705 0.516309429916062 -0.176333333333333 -0.0883333333333333 12.2190965310935 3.8543013556491 -0.176333333333333 -0.0883333333333334 0.0599915864614478 0.411689569985923 -2.37125754357505 -0.889028109074987 D3DTX6 PPP1R9B D3DTX6.S100.p_PPP1R9B D3DTX6_S100s _1_1_100_100 D3DTX6 D3DTX6|Q96SB3 Neurabin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15901.15901.2 11.92 11.92 1.248 3 1 1 0 1068.5565 2056.1439 S100s TMT10 98 (R) ASsLNENVDHSALLK (L) AS(0.0)S(0.99)LNENVDHS(0.0)ALLK K:TMT10,s:Phosphorylated S PPP1R9B 89503.8 3 3 1790.1 114.58 HUMAN 1 -12.2191 -3.8543 LSLPRRGSFPVCPNA-p E7EX28;S224-p LSLPRRGSFPVCPNA 0.412161436237322 0.172081174191461 0.143666666666667 0.144666666666667 7.09908622073852 10.0476527428945 0.143666666666667 0.144666666666667 0.195025490085289 0.0989087528213506 1.47834683007862 1.98918187463391 E7EX28 MAST4 E7EX28.S224.p_MAST4 E7EX28_S224s _1_1_224_224 E7EX28 E7EX28 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8975.8975.2 8.48 8.48 99 1 1 1 0 813.8912 1546.811 S224s TMT10 222 (R) RGsFPVCPNAGR (T) RGS(1.0)FPVCPNAGR C:Carbamidomethylation,s:Phosphorylated S MAST4 24434.9 2 1 121.6 549.41 HUMAN 1 7.0991 10.0477 LSLRRSLSGSSPCPK-p Q9UQ35;S780-p LSLRRSLSGSSPCPK 0.651562730292208 0.0206907854655544 0.0766666666666667 0.384333333333333 3.48665932414126 23.0426855540857 0.0766666666666666 0.384333333333333 0.448057826265356 0.00496285337746832 0.817637668539929 4.55940675175041 Q9UQ35 SRRM2 Q9UQ35.S780.p_SRRM2 Q9UQ35_S780s _1_1_780_780 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9149.9914.2 13.05 7.09 2.166 4 1 1 0 779.3905 1477.8085 S780s TMT10 778 (R) SLsGSSPCPK (Q) S(0.0)LS(0.99)GS(0.0)S(0.0)PCPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SRRM2 300351.7 2 22 2.1 3310.34 HUMAN 1 3.4867 23.0427 LSLRTVASDLQKCDS-p Q7L8J4;S343-p LSLRTVASDLQKCDS 0.156183482220179 0.0601157292691754 -0.555 0.409666666666667 16.1871839940657 16.2664039888974 -0.555 0.409666666666667 0.0240592231682383 0.0236243354725158 -3.10421455395989 3.11726294177374 Q7L8J4 SH3BP5L Q7L8J4.S343.p_SH3BP5L Q7L8J4_S343s _1_1_343_343 Q7L8J4 Q7L8J4|Q7L8J4-2 SH3 domain-binding protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13798.13798.2 12.11 12.11 4.06 2 1 1 0 700.3831 1319.7935 S343s TMT10 340 (R) TVAsDLQK (C) T(0.0)VAS(0.99)DLQK K:TMT10,s:Phosphorylated S SH3BP5L 43726.7 2 4 1783.1 115.12 HUMAN 1 -16.1872 16.2664 LSLRVQNSLRRRTHS-p P49796;S936-p LSLRVQNSLRRRTHS 0.918430174900821 0.0321244940399082 0.039 -0.431666666666667 0.719461448144088 20.1470103961737 0.0389999999999999 -0.431666666666667 0.847332482062699 0.0096671611969943 0.201948047974272 -3.90688146933215 P49796 RGS3 P49796.S936.p_RGS3 P49796_S936s _1_1_936_936 P49796 P49796 Regulator of G-protein signaling 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4053.4053.3 7.34 3.61 99 1 1 1 0 394.5503 1101.669 S936s TMT10 933 (R) VQNsLRR (R) VQNS(1.0)LRR s:Phosphorylated S RGS3 134216.1 1 7 1029.1 186.27 HUMAN 1 0.7195 -20.147 LSLSGAPSMPALTVP-p G3V2R1;S296-p LSLSGAPSMPALTVP 0.919774718344234 0.564753401014655 -0.0183333333333333 0.0643333333333334 0.709499883954079 3.3454290885701 -0.0183333333333333 0.0643333333333334 0.849278268872711 0.462867929567715 -0.199333306723332 0.789622151313841 G3V2R1 SAMD4A G3V2R1.S296.p_SAMD4A G3V2R1_S296s _1_1_296_296 G3V2R1 G3V2R1 Protein Smaug homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.34546.34546.3 13.95 10.98 2.723 4 1 1 0 784.0919 2270.2983 S296s TMT10 287 (R) GWLSLSGAPsMPALTVPK (S) GWLS(0.0)LS(0.0)GAPS(0.99)MPALT(0.0)VPK K:TMT10,s:Phosphorylated S SAMD4A 37633.9 1 2 2441.2 83.32 HUMAN 1 -0.7095 3.3454 LSLVRVDSDKTQASE-p Q9Y3R5;S1183-p LSLVRVDSDKTQASE 0.0513340883733772 0.194552443640877 -0.737666666666667 0.249666666666667 28.2404694927267 9.3493746347429 -0.737666666666667 0.249666666666667 0.00149952272129289 0.116161586945559 -5.9141392893696 1.86815922105927 Q9Y3R5 DOPEY2 Q9Y3R5.S1183.p_DOPEY2 Q9Y3R5_S1183s _1_1_1183_1183 Q9Y3R5 Q9Y3R5|Q9Y3R5-2 Protein dopey-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17702.17702.3 10.9 4.45 9.268 2 1 1 0 557.3149 1589.9627 S1183s TMT10 1176 (K) LSLVRVDsDK (T) LS(0.0)LVRVDS(0.99)DK K:TMT10,s:Phosphorylated S DOPEY2 260507.5 1 9 894.1 204.29 HUMAN 1 -28.2405 9.3494 LSMDNSRSLDLDGII-p P08729;S254-p LSMDNSRSLDLDGII 0.742175050092019 0.0480183761752616 -0.074 0.372333333333333 2.45890803098282 17.6372020935023 -0.0740000000000001 0.372333333333333 0.567687324017622 0.0172297823206586 -0.6081920381865 3.38650828127841 P08729 KRT7 P08729.S254.p_KRT7 P08729_S254s _1_1_254_254 P08729 P08729|A0A1W2PRP1 Keratin, type II cytoskeletal 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.34052.34052.3 13.05 10.03 99 1 1 1 0 604.3365 1731.0304 S254s TMT10 254 (R) sLDLDGIIAEVK (A) S(1.0)LDLDGIIAEVK K:TMT10,s:Phosphorylated S KRT7 51441.8 2 44 69.2 672.47 HUMAN 1 -2.4589 17.6372 LSMDNSRSLDMDSII-p P05787;S253-p LSMDNSRSLDMDSII 0.208094276358716 0.035718983262295 -0.359 0.622333333333333 13.1482291058209 19.4799555319076 -0.359 0.622333333333333 0.0484369835638332 0.0112720899778594 -2.53781164176174 3.7648148453149 P05787 KRT8 P05787.S253.p_KRT8 P05787_S253s_1_1_253_253 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24516.24516.3 15.59 12.53 3.363 2 1 1 0 625.6578 1778.9974 S253s M256m TMT10 253 (R) sLDmDSIIAEVK (A) S(0.99)LDM(1.0)DS(0.0)IIAEVK K:TMT10,s:Phosphorylated S,m:Oxidized methionine KRT8 53703.3 6 19 69.1 672.47 HUMAN 1 -13.1482 19.48 LSMEDSKSPPPKATE-p Q9NQG5;S134-p LSMEDSKSPPPKATE 0.297330507583042 0.420518020845712 -0.151 0.0833333333333334 9.91764860727045 5.00795612471798 -0.151 0.0833333333333334 0.101914303146445 0.315648978007167 -1.96740668866032 1.10529221668244 Q9NQG5 RPRD1B Q9NQG5.S134.p_RPRD1B Q9NQG5_S134s _1_1_134_134 Q9NQG5 Q9NQG5 Regulation of nuclear pre-mRNA domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29431.29431.4 17.37 12.73 1.413 5 1 1 0 916.2492 3582.0059 S134s TMT10 115 (R) SVYGGEFIQQLKLSMEDSKsPPPK (A) S(0.0)VY(0.0)GGEFIQQLKLS(0.0)MEDS(0.0)KS(0.99)PPPK K:TMT10,s:Phosphorylated S RPRD1B 37013.2 38 1 1310.1 155.23 HUMAN 1 -9.9176 5.008 LSNPTDDSWKGRPYA-p Q9Y6D5;S1534-p LSNPTDDSWKGRPYA 0.335171477958655 0.0421919297014598 -0.420333333333333 0.468333333333333 8.85268991296704 18.4148065687385 -0.420333333333334 0.468333333333333 0.130235987898549 0.0144052016842472 -1.78286310521214 3.54372021767246 Q9Y6D5 ARFGEF2 Q9Y6D5.S1534.p_ARFGEF2 Q9Y6D5_S1528sS1534s_2_2_1528_1534 Q9Y6D5 Q9Y6D5 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13582.13582.4 9.71 9.71 1.109 5 2 2 0 831.9059 3164.6692 S1528s S1534s TMT10 1523 (R) GQSQLsNPTDDsWKGRPYANQK (L) GQS(0.0)QLS(0.99)NPT(0.0)DDS(0.99)WKGRPY(0.0)ANQK K:TMT10,s:Phosphorylated S ARFGEF2 204545.1 3 19 205.1 448.88 HUMAN 1 -8.8527 18.4148 LSNSHRLYMNLQPVL-p Q96NE9;Y324-p LSNSHRLYMNLQPVL 0.239266869628446 0.241029595733615 0.208666666666667 0.229666666666667 11.8726027819757 8.14087450138481 0.208666666666667 0.229666666666667 0.0649740176096554 0.153430800130733 2.30975807797566 1.65905444430139 Q96NE9 FRMD6 Q96NE9.Y324.p_FRMD6 Q96NE9_Y324y_1_1_324_324 Q96NE9 Q96NE9|Q96NE9-2|G3V4T7 FERM domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21431.21431.5 7.08 3.57 3.771 1 1 1 0 684.9821 3339.9178 Y324y N340n TMT10 323 (R) LyMNLQPVLRHIRKLEEnEEK (K) LY(1.0)MN(0.0)LQPVLRHIRKLEEN(0.99)EEK K:TMT10,y:Phosphorylated Y,n:Deamidated FRMD6 72898.5 1 1 1456.1 140.48 HUMAN 1 11.8726 8.1409 LSPAFDHSPNKIMTE-p P17706;S304-p LSPAFDHSPNKIMTE 0.129650719850681 0.00119729192543449 -0.456 -1.38966666666667 18.3810128514519 48.1316869301869 -0.456 -1.38966666666667 0.0145177299899377 1.53755729087151e-05 -3.53978953430692 -14.4715756061588 P17706 PTPN2 P17706.S304.p_PTPN2 P17706_S304s _1_1_304_304 P17706 P17706|P17706-4|P17706-2|K7EQG9|P17706-3 Tyrosine-protein phosphatase non-receptor type 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17222.17222.5 22.03 17.95 5.622 3 1 1 0 537.0829 2601.4127 S304s TMT10 291 (K) ELSKEDLSPAFDHsPNK (I) ELS(0.0)KEDLS(0.0)PAFDHS(0.99)PNK K:TMT10,s:Phosphorylated S PTPN2 48871.8 13 3 3103.1 60.55 HUMAN 1 -18.381 -48.1317 LSPCLHRSLEGLNQE-p Q9C073;S213-p LSPCLHRSLEGLNQE 0.229662594206727 0.674282153853535 -0.452333333333333 0.0403333333333334 12.2779856912463 2.33955992371863 -0.452333333333333 0.0403333333333334 0.0591836071039556 0.583504228525133 -2.38174075681789 0.582680674811239 Q9C073 FAM117A Q9C073.S213.p_FAM117A Q9C073_S213s _1_1_213_213 Q9C073 Q9C073 Protein FAM117A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34599.34599.3 22.81 22.81 99 1 1 1 0 1042.8526 3046.5782 S213s Hydrogen 213 (R) sLEGLNQELEEVFVKEQGEEELLR (I) S(1.0)LEGLNQELEEVFVKEQGEEELLR K:TMT10-Lys-Only,s:Phosphorylated S FAM117A 49059.4 8 9 640.1 255.25 HUMAN 1 -12.278 2.3396 LSPFLIPSPPICQTE-p Q6N021;S21-p LSPFLIPSPPICQTE 0.830607885532595 0.250841142164965 0.037 -0.253 1.55265376318373 7.91316873648445 0.037 -0.253 0.699414487090853 0.161689987086281 0.407285510870213 -1.61958652823538 Q6N021 TET2 Q6N021.S21.p_TET2 Q6N021_S21s _1_1_21_21 Q6N021 Q6N021|Q6N021-3|E7EPB1|Q6N021-2 Methylcytosine dioxygenase TET2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35123.35123.3 16.86 16.86 4.61 4 1 1 0 916.5012 2667.5196 S21s TMT10 14 (R) LSPFLIPsPPICQTEPLATK (L) LS(0.0)PFLIPS(0.99)PPICQT(0.0)EPLAT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TET2 226374.6 2 2 594.1 264.06 HUMAN 1 1.5527 -7.9132 LSPFRRHSWGPGKNA-p Q12802-2;S1565-p LSPFRRHSWGPGKNA 0.343601208355647 0.797987875856797 -0.182666666666667 0.026 8.61515018213894 1.37067517212949 -0.182666666666667 0.026 0.137557724100769 0.72934411459349 -1.74174360305054 0.364399279704977 Q12802 AKAP13 Q12802.2.S1565.p_AKAP13 Q12802-2_S1565s _1_1_1565_1565 Q12802-2 Q12802-2|Q12802-4|A8MYJ1|A0A087WTD7 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3960.3960.3 11.59 11.59 99 1 1 1 0 411.8747 1153.6428 S1565s Hydrogen 1563 (R) RHsWGPGK (N) RHS(1.0)WGPGK K:TMT10-Lys-Only,s:Phosphorylated S AKAP13 310921 8 11 66.1 683.25 HUMAN 1 -8.6152 1.3707 LSPGAVESDVRGITG-p P53621-2;S179-p LSPGAVESDVRGITG 0.329350427440409 0.0188127904433449 -0.133666666666667 -0.401333333333333 9.01650508790888 23.7435783201513 -0.133666666666667 -0.401333333333333 0.125415002518284 0.00422320504682485 -1.81122007505485 -4.72692449707572 P53621 COPA P53621.2.S179.p_COPA P53621-2_S179s _1_1_179_179 P53621-2 P53621-2 Isoform 2 of Coatomer subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13849.14056.3 11.13 6.35 2.025 2 1 1 0 637.3436 1830.0485 S179s TMT10 170 (K) KNLSPGAVEsDVR (G) KNLS(0.0)PGAVES(0.99)DVR K:TMT10,s:Phosphorylated S COPA 140918.9 1 2 545.1 275.81 HUMAN 1 -9.0165 -23.7436 LSPLPPGSPGSAARG-p Q6ZN18;S24-p LSPLPPGSPGSAARG 0.766408751268498 0.0172462309831495 -0.041 -0.392666666666667 2.21571405864626 24.3262707613555 -0.041 -0.392666666666667 0.600383286924964 0.00369294571621012 -0.556060699974614 -4.86927577061681 Q6ZN18 AEBP2 Q6ZN18.S24.p_AEBP2 Q6ZN18_S24s _1_1_24_24 Q6ZN18 Q6ZN18|Q6ZN18-2 Zinc finger protein AEBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16186.16390.2 13.05 13.05 2 3 1 1 0 808.4244 1535.8743 S24s TMT10 17 (R) LSPLPPGsPGSAAR (G) LS(0.0)PLPPGS(0.99)PGS(0.0)AAR s:Phosphorylated S AEBP2 54979.1 4 2 1557.1 131.71 HUMAN 1 -2.2157 -24.3263 LSPLRAASDPLLSSV-p P19532;S548-p LSPLRAASDPLLSSV 0.664065722849874 0.543849161393254 -0.07 -0.0783333333333333 3.32665056757771 3.55712872723954 -0.07 -0.0783333333333332 0.464873663991354 0.440846226044272 -0.786012508199705 -0.83133783830423 P19532 TFE3 P19532.S548.p_TFE3 P19532_S548s _1_1_548_548 P19532 P19532 Transcription factor E3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21667.21667.3 14.55 10.85 1.101 5 1 1 0 613.324 1757.9846 S548s Hydrogen 546 (R) AAsDPLLSSVSPAVSK (A) AAS(0.99)DPLLS(0.0)S(0.0)VS(0.0)PAVS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S TFE3 61577 2 2 3850.1 41.69 HUMAN 1 -3.3267 -3.5571 LSPPPCLSPPSYTFP-p Q6NXG1-3;S549-p LSPPPCLSPPSYTFP 0.766173684609334 0.866954639619303 0.043 -0.018 2.22004628424785 0.872878021640428 0.043 -0.018 0.599784684110994 0.81792258022263 0.556999647715541 -0.241656624945716 Q6NXG1 ESRP1 Q6NXG1.3.S549.p_ESRP1 Q6NXG1-3_S549s_1_1_549_549 Q6NXG1-3 Q6NXG1-3|Q6NXG1-5 Isoform 3 of Epithelial splicing regulatory protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36707.36707.5 25.11 25.11 1.126 8 1 1 0 883.4538 4332.294 N540n S549s TMT10 540 (R) nGLSPPPCLsPPSYTFPAPAAVIPTEAAIYQPSVILNPR (A) N(0.99)GLS(0.0)PPPCLS(0.99)PPS(0.0)Y(0.0)T(0.0)FPAPAAVIPT(0.0)EAAIY(0.0)QPS(0.0)VILN(0.0)PR C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S ESRP1 75998.2 12 7 1809.2 113.42 HUMAN 1 2.22 -0.8729 LSPQRQLSRDPLLPS-p Q9NYQ7-2;S3186-p LSPQRQLSRDPLLPS 0.878395260815069 0.456754950009625 -0.024 -0.103 1.10702842458522 4.53810285942158 -0.024 -0.103 0.774991889537028 0.351714047194144 -0.300514030304296 -1.01849904040606 Q9NYQ7 CELSR3 Q9NYQ7.2.S3186.p_CELSR3 Q9NYQ7-2_S3186s _1_1_3186_3186 Q9NYQ7-2 Q9NYQ7-2 Isoform 2 of Cadherin EGF LAG seven-pass G-type receptor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19430.19430.4 15.03 15.03 5.034 4 1 1 0 590.5737 2279.3033 S3186s TMT10 3184 (R) QLsRDPLLPSRPLDSLSR (S) QLS(0.99)RDPLLPS(0.0)RPLDS(0.0)LS(0.0)R s:Phosphorylated S CELSR3 363540.1 2 7 1821.1 112.78 HUMAN 1 -1.107 -4.5381 LSPRHRMSPGVAGSP-p Q15596;S493-p LSPRHRMSPGVAGSP 0.56180416027387 0.0125557733612715 0.108333333333333 0.454 4.6082588798472 26.5160708350448 0.108333333333333 0.454 0.34607809540173 0.00223045217957657 1.03175400644279 5.43096541556906 Q15596 NCOA2 Q15596.S493.p_NCOA2 Q15596_S493s _1_1_493_493 Q15596 Q15596|E7EWM1 Nuclear receptor coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5340.5340.2 13.17 13.17 13.174 2 1 1 0 519.7259 958.4775 S493s Hydrogen 492 (R) MsPGVAGSPR (I) MS(0.99)PGVAGS(0.0)PR s:Phosphorylated S NCOA2 160009.7 6 5 290.1 381.81 HUMAN 1 4.6083 26.5161 LSPRRSRSGSSPEVK-p Q9UQ35;S1598-p LSPRRSRSGSSPEVK 0.418116670228811 0.347991046962556 0.168 0.118666666666667 6.98765090548971 6.07723523841265 0.168 0.118666666666667 0.200094388552273 0.246760974205959 1.45885139532669 1.29799821802998 Q9UQ35 SRRM2 Q9UQ35.S1598.p_SRRM2 Q9UQ35_S1598sS1600sS1601s_3_3_1598_1601 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7956.7956.3 9.54 9.54 99 3 3 3 0 662.3037 1744.9958 S1598s S1600s S1601s Hydrogen 1598 (R) sGssPEVKDKPR (A) S(1.0)GS(1.0)S(1.0)PEVKDKPR K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 3 273 2.1 3310.34 HUMAN 1 6.9877 6.0772 LSPRSKESVPEFPLS-p P16949;S31-p LSPRSKESVPEFPLS 0.624184595628004 0.189318761248601 0.066 0.157666666666667 3.80353739696115 9.5045923892628 0.066 0.157666666666667 0.41652997503688 0.11208326178878 0.879384271894319 1.89503021858787 P16949 STMN1 P16949.S31.p_STMN1 P16949_S31s _1_1_31_31 P16949 P16949-2 Stathmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22144.22144.3 14.49 14.49 1.155 3 1 1 0 770.4329 2229.3098 S31s TMT10 28 (R) SKEsVPEFPLSPPK (K) S(0.0)KES(0.99)VPEFPLS(0.0)PPK K:TMT10,s:Phosphorylated S STMN1 17302.2 1 5 690.1 243.18 HUMAN 1 3.8035 9.5046 LSPVKCRSPLQTPSS-p A0A087WV86;S314-p LSPVKCRSPLQTPSS 0.095910076009562 0.00873609324870161 -0.391666666666667 -0.575 21.5939818823759 29.1893490364798 -0.391666666666667 -0.575 0.00692790321407582 0.0012052165766135 -4.22969574235229 -6.17977446690585 A0A087WV86 BORA A0A087WV86.S314.p_BORA A0A087WV86_S314s _1_1_314_314 A0A087WV86 A0A087WV86|B5LMG6|Q6PGQ7 Protein aurora borealis HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15681.15681.4 12.72 12.72 2.316 8 1 1 0 740.6259 2879.5086 S314s TMT10 312 (K) CRsPLQTPSSGQFSSSPIQASAK (K) CRS(0.99)PLQT(0.0)PS(0.0)S(0.0)GQFS(0.0)S(0.0)S(0.0)PIQAS(0.0)AK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BORA 69923.5 1 2 1228.1 164.27 HUMAN 1 -21.594 -29.1893 LSPWSGDSKCHQRRV-p Q96CP6;S415-p LSPWSGDSKCHQRRV 0.152460459216563 0.00687767716980711 -0.265666666666667 -0.513666666666667 16.425775910919 31.0081414166632 -0.265666666666667 -0.513666666666667 0.0227731134085724 0.000792840557674714 -3.15037659688286 -6.73366602135282 Q96CP6 GRAMD1A Q96CP6.S415.p_GRAMD1A Q96CP6_S415s _1_1_415_415 Q96CP6 Q96CP6|Q96CP6-3|Q96CP6-2 GRAM domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28072.28072.3 16.85 16.85 1.132 5 1 1 0 693.3477 1998.0584 S415s TMT10 403 (K) FTDVTLSPWSGDsK (C) FT(0.0)DVT(0.0)LS(0.0)PWS(0.0)GDS(0.99)K K:TMT10,s:Phosphorylated S GRAMD1A 81363.3 1 9 1250.1 161.94 HUMAN 1 -16.4258 -31.0081 LSQSSQDSSPVRNLQ-p O95251;S56-p LSQSSQDSSPVRNLQ 0.0930004911854097 0.757356365974704 0.404666666666667 0.0426666666666667 21.9511739566154 1.66743402297873 0.404666666666667 0.0426666666666667 0.00638090978270176 0.681171701978076 4.31077295347917 0.433777532629701 O95251 KAT7 O95251.S56.p_KAT7 O95251_S56sS57s_2_2_56_57 O95251 O95251|O95251-4|O95251-2 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18411.18411.4 8.1 6.96 1.19 10 2 2 0 879.9057 3356.6668 S56s S57s TMT10 49 (R) LSQSSQDssPVRNLQSFGTEEPAYSTRR (V) LS(0.0)QS(0.0)S(0.0)QDS(0.99)S(0.99)PVRNLQS(0.0)FGT(0.0)EEPAY(0.0)S(0.0)T(0.0)RR s:Phosphorylated S KAT7 71325.8 4 15 691.1 243.06 HUMAN 1 21.9512 1.6674 LSQSTPGTPSKTITI-p Q6MZP7;T280-p LSQSTPGTPSKTITI 0.176527526104725 0.000952253650599092 -0.242333333333333 -1.48766666666667 14.9438934960897 55.6998440416194 -0.242333333333333 -1.48766666666667 0.0320339615815617 2.69163146068032e-06 -2.86793495938992 -20.062529590746 Q6MZP7 LIN54 Q6MZP7.T280.p_LIN54 Q6MZP7_T280t _1_1_280_280 Q6MZP7 Q6MZP7|Q6MZP7-3 Protein lin-54 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12585.12585.2 16.14 16.14 2 5 1 1 0 870.4704 1659.9682 T280t TMT10 272 (R) VLSQSTPGtPSK (T) VLS(0.0)QS(0.0)T(0.0)PGT(0.99)PS(0.0)K K:TMT10,t:Phosphorylated T LIN54 80862.1 2 5 2171.1 94.63 HUMAN 1 -14.9439 -55.6998 LSRCSLHSASPASVR-p Q9P206-3;S336-p LSRCSLHSASPASVR 0.290027496028783 0.505532832228834 0.171666666666667 0.0656666666666667 10.1336486112746 3.97022963516038 0.171666666666667 0.0656666666666667 0.0969694961131523 0.400845522179698 2.00493965624295 0.911281185230238 Q9P206 KIAA1522 Q9P206.3.S336.p_KIAA1522 Q9P206-3_S336sS338s_2_2_336_338 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7437.7437.2 10.18 10.18 2.606 4 2 2 0 830.8602 1500.779 S336s S338s TMT10 332 (R) CSLHsAsPASVR (S) CS(0.0)LHS(0.99)AS(0.99)PAS(0.0)VR C:Carbamidomethylation,s:Phosphorylated S KIAA1522 108782.6 5 42 62.1 704.36 HUMAN 1 10.1336 3.9702 LSRCSSMSSLSREVS-p J3KNL6;S2297-p LSRCSSMSSLSREVS 0.191011115230049 0.223923519859577 0.217 0.125333333333333 14.057103974444 8.55907651905889 0.217 0.125333333333333 0.0392906851917322 0.139345307439355 2.70340890954492 1.73144577180834 J3KNL6 SEC16A J3KNL6.S2297.p_SEC16A J3KNL6_S2297s _1_1_2297_2297 J3KNL6 J3KNL6|O15027-5|O15027-4|Q8N9G1 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8475.8475.2 9.72 5.23 1.197 5 1 1 0 662.2859 1243.5972 S2297s TMT10 2293 (R) CSSMsSLSR (E) CS(0.0)S(0.0)MS(0.99)S(0.0)LS(0.0)R C:Carbamidomethylation,s:Phosphorylated S SEC16A 253486.5 2 47 15.1 1143.82 HUMAN 1 14.0571 8.5591 LSRETDVSPFPPRKR-p Q9H8V3;S397-p LSRETDVSPFPPRKR 0.458964628123898 0.0105535464159487 0.156 -0.553666666666667 6.23779658310144 27.7176375422414 0.156 -0.553666666666667 0.237804649555665 0.00169136074109695 1.32681658396876 -5.75843949047193 Q9H8V3 ECT2 Q9H8V3.S397.p_ECT2 Q9H8V3_S397s _1_1_397_397 Q9H8V3 Q9H8V3-3|Q9H8V3-4|Q9H8V3-2 Protein ECT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13936.14557.2 12.08 12.08 1.832 2 1 1 0 727.3504 1373.7262 S397s TMT10 393 (R) ETDVsPFPPR (K) ET(0.0)DVS(0.99)PFPPR s:Phosphorylated S ECT2 104530 2 9 572.1 269.2 HUMAN 1 6.2378 -27.7176 LSRGKKASGDLIPWT-p Q9H0A0;S601-p LSRGKKASGDLIPWT 0.493546980184119 0.0875405712563061 0.114 -0.219333333333333 5.64667047827079 14.0042301078367 0.114 -0.219333333333333 0.272478946931187 0.039771959565737 1.22135514666176 -2.69207966613734 Q9H0A0 NAT10 Q9H0A0.S601.p_NAT10 Q9H0A0_S601s _1_1_601_601 Q9H0A0 Q9H0A0 RNA cytidine acetyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27647.27647.4 10.04 10.04 3.779 4 1 1 0 954.9926 3736.9902 S601s TMT10 597 (R) GKKAsGDLIPWTVSEQFQDPDFGGLSGGR (V) GKKAS(0.99)GDLIPWT(0.0)VS(0.0)EQFQDPDFGGLS(0.0)GGR K:TMT10,s:Phosphorylated S NAT10 116640.6 1 2 3187.1 58.19 HUMAN 1 5.6467 -14.0042 LSRGPTSSPCEEEGD-p E7ERS3;S95-p LSRGPTSSPCEEEGD 0.137831886053651 0.185576010457177 0.282666666666667 0.508333333333333 17.6172763912459 9.61890245847202 0.282666666666667 0.508333333333333 0.0173090152626331 0.109171619822527 3.38521937617441 1.914828641042 E7ERS3 ZC3H18 E7ERS3.S95.p_ZC3H18 E7ERS3_S95s _1_1_95_95 E7ERS3 E7ERS3 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5157.5157.2 10.54 8.28 1.12 3 1 1 0 1144.9354 2208.9036 S95s TMT10 91 (R) GPTSsPCEEEGDEGEEDR (T) GPT(0.0)S(0.0)S(0.99)PCEEEGDEGEEDR C:Carbamidomethylation,s:Phosphorylated S ZC3H18 109165.8 8 5 157.1 499.97 HUMAN 1 17.6173 9.6189 LSRKFWGSSKRLSQI-p Q6ZS30;S2674-p LSRKFWGSSKRLSQI 0.545859606083575 0.0256564022039077 -0.108666666666667 -0.359666666666667 4.85346465768587 21.6420790291099 -0.108666666666667 -0.359666666666667 0.327079657440225 0.00685160152076557 -1.07713505368505 -4.23617236905706 Q6ZS30 NBEAL1 Q6ZS30.S2674.p_NBEAL1 Q6ZS30_S2674s _1_1_2674_2674 Q6ZS30 Q6ZS30|Q6ZS30-1 Neurobeachin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15780.15780.3 8.37 8.37 8.37 2 1 1 0 536.3047 1526.9298 S2674s TMT10 2670 (R) KFWGsSK (R) KFWGS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S NBEAL1 310426.9 1 4 2377.1 85.98 HUMAN 1 -4.8535 -21.6421 LSRKSGISPKKSKYM-p Q86U86;S648-p LSRKSGISPKKSKYM 0.166006021695114 0.00387979257248964 0.332333333333333 -0.806333333333333 15.60019837757 35.6138668386684 0.332333333333333 -0.806333333333333 0.0275410289821246 0.000274544859258646 2.99179516982439 -8.32296720826656 Q86U86 PBRM1 Q86U86.S648.p_PBRM1 Q86U86_S648s _1_1_648_648 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-9|Q86U86-3|Q86U86-7|Q86U86-4|Q86U86-5|Q86U86-6 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8232.8232.2 10.87 2.02 3.434 2 1 1 0 742.4465 1403.9189 S648s TMT10 644 (R) KSGIsPK (K) KS(0.0)GIS(0.99)PK K:TMT10,s:Phosphorylated S PBRM1 194199.5 12 12 194.1 462.54 HUMAN 1 15.6002 -35.6139 LSRLAEISDVWEEMK-p A0A087WUZ3;S1041-p LSRLAEISDVWEEMK 0.79813572883131 0.0475479453433679 0.0406666666666667 -0.248333333333333 1.88937751669247 17.6950967424981 0.0406666666666667 -0.248333333333333 0.647235378692549 0.017001620807783 0.484162101632038 -3.3980967827133 A0A087WUZ3 NotFound A0A087WUZ3.S1041.p_NotFound A0A087WUZ3_S1041s _1_1_1041_1041 A0A087WUZ3 A0A087WUZ3|Q01082|Q01082-2|Q01082-3 Spectrin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32984.32984.3 16.18 16.18 99 1 1 1 0 663.3317 1908.0189 S1041s TMT10 1037 (R) LAEIsDVWEEMK (T) LAEIS(1.0)DVWEEMK K:TMT10,s:Phosphorylated S SPTBN1 275623.3 1 4 233.1 420.49 HUMAN 1 1.8894 -17.6951 LSRLGHGSYGEVFKV-p Q99640;S120-p LSRLGHGSYGEVFKV 0.476173375403983 0.00742374462614719 -0.0953333333333333 -0.539333333333333 5.9316121392798 30.4472982205639 -0.0953333333333334 -0.539333333333333 0.255175389336043 0.00090213218645594 -1.27237126486308 -6.55877719214627 Q99640 PKMYT1 Q99640.S120.p_PKMYT1 Q99640_S120s _1_1_120_120 Q99640 Q99640|Q99640-3|Q99640-2|A6NHV6|Q99640-4 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16860.16860.3 16.97 16.97 6.227 2 1 1 0 577.9672 1651.9208 S120s TMT10 116 (R) LGHGsYGEVFK (V) LGHGS(0.99)Y(0.0)GEVFK K:TMT10,s:Phosphorylated S PKMYT1 55090.9 2 6 926.1 199.78 HUMAN 1 -5.9316 -30.4473 LSRQALDSEEEEEDV-p Q8NC44;S385-p LSRQALDSEEEEEDV 0.544861566721971 0.347041985096157 0.104 -0.0933333333333333 4.86987454372139 6.09343092374511 0.104 -0.0933333333333334 0.325846113705159 0.245842468280277 1.08015710204605 -1.3008764718706 Q8NC44 FAM134A Q8NC44.S385.p_FAM134A Q8NC44_S385s _1_1_385_385 Q8NC44 Q8NC44 Reticulophagy regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22336.22336.3 23.26 23.26 14.206 2 1 1 0 938.4683 2733.4195 S385s TMT10 381 (R) QALDsEEEEEDVAAKETLLR (L) QALDS(0.99)EEEEEDVAAKET(0.0)LLR K:TMT10,s:Phosphorylated S RETREG2 58171.3 13 5 1304.1 156.18 HUMAN 1 4.8699 -6.0934 LSRRFGDSSDSDNGF-p Q8IU60;S246-p LSRRFGDSSDSDNGF 0.918430174900821 0.0472979764810446 0.015 0.242 0.72061400442639 17.7301367859858 0.015 0.242 0.84710764181263 0.0168649990631982 0.202250291764445 3.40511950420719 Q8IU60 DCP2 Q8IU60.S246.p_DCP2 Q8IU60_S246sS247s_2_2_246_247 Q8IU60 Q8IU60|Q8IU60-2 m7GpppN-mRNA hydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15730.15730.3 11.85 11.85 1.241 9 2 2 0 1174.5542 3361.7115 S246s S247s TMT10 242 (R) RFGDssDSDNGFSSTGSTPAKPTVEK (L) RFGDS(0.99)S(0.99)DS(0.0)DNGFS(0.0)S(0.0)T(0.0)GS(0.0)T(0.0)PAKPT(0.0)VEK K:TMT10,s:Phosphorylated S DCP2 49026.8 5 6 1279.1 158.9 HUMAN 2 0.7206 17.7301 LSRRLQITPDSNGEQ-p Q96PU5;T318-p LSRRLQITPDSNGEQ 0.879644980424511 0.170389705584643 0.0223333333333333 -0.151 1.09614326634889 10.1038994497887 0.0223333333333333 -0.151 0.776936765749445 0.0976360171540618 0.297824074846006 -1.9989494300286 Q96PU5 NEDD4L Q96PU5.T318.p_NEDD4L Q96PU5_T318t _1_1_318_318 Q96PU5 A0A1B0GVY1|Q96PU5|Q96PU5-7|Q96PU5-5|Q96PU5-6|Q96PU5-2 E3 ubiquitin-protein ligase NEDD4-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23190.23190.4 19.84 19.84 4.855 6 1 1 0 725.361 2818.4533 T318t TMT10 315 (R) LQItPDSNGEQFSSLIQREPSSR (L) LQIT(0.99)PDS(0.0)NGEQFS(0.0)S(0.0)LIQREPS(0.0)S(0.0)R t:Phosphorylated T NEDD4L 112272 2 5 495.1 293.21 HUMAN 1 1.0961 -10.1039 LSRSRTASLTSAASV-p Q9UN36;S332-p LSRSRTASLTSAASV 0.885891325309933 0.341682876478045 0.026 0.166333333333333 1.03394709133208 6.17647922844368 0.0259999999999999 0.166333333333333 0.788143486727733 0.241185990128556 0.282372154319075 1.31561995215242 Q9UN36 NDRG2 Q9UN36.S332.p_NDRG2 Q9UN36_S332s _1_1_332_332 Q9UN36 Q9UN36|Q9UN36-6|Q9UN36-3|Q9UN36-2|A0A0A0MS87 Protein NDRG2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11197.11402.2 14.92 11.79 2.189 5 1 1 0 829.9013 1578.8285 S332s TMT10 330 (R) TAsLTSAASVDGNR (S) T(0.0)AS(0.99)LT(0.0)S(0.0)AAS(0.0)VDGNR s:Phosphorylated S NDRG2 41139.8 2 2 2649.1 75.22 HUMAN 1 1.0339 6.1765 LSRTLPASAEERDRL-p Q6ZRV2;S1112-p LSRTLPASAEERDRL 0.265858706914952 0.803765169457027 -0.159666666666667 0.035 10.9038380315613 1.32730036176825 -0.159666666666667 0.035 0.0812112503105304 0.736664876896754 -2.13927093388971 0.354039928783749 Q6ZRV2 FAM83H Q6ZRV2.S1112.p_FAM83H Q6ZRV2_S1112s _1_1_1112_1112 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7925.7925.2 9.45 4.78 4.615 2 1 1 0 641.8153 1202.6578 S1112s TMT10 1108 (R) TLPAsAEER (D) T(0.0)LPAS(0.99)AEER s:Phosphorylated S FAM83H 127633.5 2 35 7.1 1347.23 HUMAN 1 -10.9038 1.3273 LSRVSDESLSKVQEA-p Q08357;S259-p LSRVSDESLSKVQEA 0.0406564911626295 0.0876797381112812 -0.682333333333333 -0.302 31.0420706807466 13.9933551038161 -0.682333333333333 -0.302 0.000786670622113129 0.0398716758226297 -6.75554887933377 -2.69008575920598 Q08357 SLC20A2 Q08357.S259.p_SLC20A2 Q08357_S259s _1_1_259_259 Q08357 Q08357 Sodium-dependent phosphate transporter 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11149.11149.2 11.43 5.23 2.234 3 1 1 0 701.8652 1322.7568 S259s TMT10 255 (R) VSDEsLSK (V) VS(0.0)DES(0.99)LS(0.0)K K:TMT10,s:Phosphorylated S SLC20A2 70904.6 1 2 2608.1 76.8 HUMAN 1 -31.0421 -13.9934 LSRVSSPSPELGTTP-p Q99501;S492-p LSRVSSPSPELGTTP 0.723870912776259 0.122368812523651 0.0713333333333333 -0.183333333333333 2.65644340744148 12.0330109729378 0.0713333333333333 -0.183333333333333 0.542444936078202 0.0626179582500651 0.649724439129575 -2.33702131732495 Q99501 GAS2L1 Q99501.S492.p_GAS2L1 Q99501_S492s _1_1_492_492 Q99501 Q99501|A0A5E8 GAS2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25274.25274.3 13.32 13.32 1.623 6 1 1 0 685.6843 1975.0698 S492s TMT10 488 (R) VSSPsPELGTTPASIFR (T) VS(0.0)S(0.0)PS(0.99)PELGT(0.0)T(0.0)PAS(0.0)IFR s:Phosphorylated S GAS2L1 73400.1 4 12 1084.1 179.86 HUMAN 1 2.6564 -12.033 LSSAGGGSPHREDAQ-p Q92994;S553-p LSSAGGGSPHREDAQ 0.307172848614777 0.0621336671487819 0.177 0.223666666666667 9.58271772419401 16.0617922342779 0.177 0.223666666666667 0.110085020487603 0.0247639989297884 1.90929632317358 3.07787880791941 Q92994 BRF1 Q92994.S553.p_BRF1 Q92994_S553s _1_1_553_553 Q92994 Q92994|Q92994-5|Q92994-8|Q92994-7 Transcription factor IIIB 90 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3710.3710.4 22.36 22.36 1.275 5 1 1 0 668.3108 2590.2556 S553s TMT10 545 (R) GLSSAGGGsPHREDAQPEHSASAR (K) GLS(0.0)S(0.0)AGGGS(0.99)PHREDAQPEHS(0.0)AS(0.0)AR s:Phosphorylated S BRF1 74808.7 4 4 1800.1 114.18 HUMAN 1 9.5827 16.0618 LSSAGPRSPYCKRMN-p Q6PL18;S342-p LSSAGPRSPYCKRMN 0.480370243746792 0.000952253650599092 -0.114333333333333 -2.07133333333333 5.86206877876232 62.9486626587026 -0.114333333333333 -2.07133333333333 0.25929439089062 5.07146852099524e-07 -1.25995305948602 -27.3675195423977 Q6PL18 ATAD2 Q6PL18.S342.p_ATAD2 Q6PL18_S342s _1_1_342_342 Q6PL18 Q6PL18|Q6PL18-2 ATPase family AAA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10002.10002.3 13.95 13.95 3.539 4 1 1 0 620.9864 1780.978 S342s TMT10 335 (R) LSSAGPRsPYCK (R) LS(0.0)S(0.0)AGPRS(0.99)PY(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATAD2 159920.6 6 7 266.1 395.28 HUMAN 1 -5.8621 -62.9487 LSSDSILSPAPDARA-p Q8IVT2;S400-p LSSDSILSPAPDARA 0.26693909840803 0.0289220802430029 0.219333333333333 -0.371333333333333 10.8714601150903 20.8356207060923 0.219333333333333 -0.371333333333333 0.0818189663312895 0.00824969570042622 2.13360511301006 -4.05662296072831 Q8IVT2 MISP Q8IVT2.S400.p_MISP Q8IVT2_S400s _1_1_400_400 Q8IVT2 Q8IVT2 Mitotic interactor and substrate of PLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18328.18328.3 10.21 10.21 3.476 4 1 1 0 603.637 1728.9329 S400s TMT10 392 (R) ALSSDSILsPAPDAR (A) ALS(0.0)S(0.0)DS(0.0)ILS(0.99)PAPDAR s:Phosphorylated S MISP 75526.3 1 12 490.1 294.31 HUMAN 1 10.8715 -20.8356 LSSDTNDSGVELGEE-p O75410;S305-p LSSDTNDSGVELGEE 0.590748705738669 0.00479967872381982 0.127333333333333 -0.551333333333333 4.21259554815016 33.877305770395 0.127333333333333 -0.551333333333333 0.379088356221447 0.00040951463124588 0.95755549085572 -7.68991553991973 O75410 TACC1 O75410.S305.p_TACC1 O75410_S305s _1_1_305_305 O75410 O75410-2|O75410-7|O75410-3|E7ET87|E7EVI4|R4GMT7 Transforming acidic coiled-coil-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17630.17630.4 21.84 21.84 1.137 8 1 1 0 864.6669 3375.6804 S305s TMT10 287 (K) SPPDLKETPGTLSSDTNDsGVELGEESR (S) S(0.0)PPDLKET(0.0)PGT(0.0)LS(0.0)S(0.0)DT(0.0)NDS(0.99)GVELGEES(0.0)R K:TMT10,s:Phosphorylated S TACC1 88648.6 4 11 442.1 311.73 HUMAN 1 4.2126 -33.8773 LSSERPSSDGEGVVE-p Q8N556-2;S283-p LSSERPSSDGEGVVE 0.108078410418423 0.0104208653247273 -0.411333333333333 -0.413 20.3288473358359 27.8247725303171 -0.411333333333333 -0.413 0.0092707584660851 0.00165014742854832 -3.94988266942493 -5.78834240454444 Q8N556 AFAP1 Q8N556.2.S283.p_AFAP1 Q8N556-2_S282sS283s_2_2_282_283 Q8N556-2 Q8N556-2 Isoform 2 of Actin filament-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14662.14662.4 12.05 12.05 1.351 6 2 2 0 867.9243 3308.7359 S282s S283s TMT10 275 (K) KLSSERPssDGEGVVENGITTCNGK (E) KLS(0.0)S(0.0)ERPS(0.99)S(0.99)DGEGVVENGIT(0.0)T(0.0)CNGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S AFAP1 90706.1 2 9 854.1 211.2 HUMAN 1 -20.3288 -27.8248 LSSGQLKSPSLSQSQ-p Q9H2P0;S409-p LSSGQLKSPSLSQSQ 0.694555291282257 0.0112982377673925 -0.063 -0.391 2.97023367384256 27.2599083908631 -0.063 -0.391 0.504634144795756 0.00187935645912305 -0.714359911298852 -5.631996304473 Q9H2P0 ADNP Q9H2P0.S409.p_ADNP Q9H2P0_S409s _1_1_409_409 Q9H2P0 Q9H2P0 Activity-dependent neuroprotector homeobox protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17024.17024.3 19.55 19.55 1.208 12 1 1 0 1136.5793 3327.7545 S409s TMT10 392 (R) YSLQSANASSLSSGQLKsPSLSQSQASR (V) Y(0.0)S(0.0)LQS(0.0)ANAS(0.0)S(0.0)LS(0.0)S(0.0)GQLKS(0.99)PS(0.0)LS(0.0)QS(0.0)QAS(0.0)R K:TMT10,s:Phosphorylated S ADNP 124930 4 3 276.1 391.38 HUMAN 1 -2.9702 -27.2599 LSSGRDASLMVTNDG-p P78371;S60-p LSSGRDASLMVTNDG 0.307290133537941 0.875270725680588 0.183333333333333 0.0276666666666667 9.5783480940522 0.813256394816349 0.183333333333333 0.0276666666666667 0.110195837667692 0.829228768160081 1.90853878764073 0.226334901952879 P78371 CCT2 P78371.S60.p_CCT2 P78371_S60s _1_1_60_60 P78371 P78371|F5GWF6|P78371-2|F8VQ14 T-complex protein 1 subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27389.27389.3 15.22 15.4 1.343 5 1 1 0 938.5148 2733.5585 S60s TMT10 51 (K) ILLSSGRDAsLMVTNDGATILK (N) ILLS(0.0)S(0.0)GRDAS(0.99)LMVT(0.0)NDGAT(0.0)ILK K:TMT10,s:Phosphorylated S CCT2 57829.5 1 5 1895.1 108.56 HUMAN 1 9.5783 0.8133 LSSKRKLSHDAESER-p Q92766;S175-p LSSKRKLSHDAESER 0.239620364697153 0.871022164412267 0.498666666666667 -0.0289999999999999 11.8608876987065 0.844893567996948 0.498666666666667 -0.0289999999999999 0.0651495214710644 0.823210010978508 2.30768400859486 -0.234483272608751 Q92766 RREB1 Q92766.S175.p_RREB1 Q92766_S175s _1_1_175_175 Q92766 Q92766-2|Q92766-3|Q92766-5 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6412.6412.4 13.55 8.07 1.599 2 1 1 0 662.5967 2567.4032 S175s TMT10 173 (R) KLsHDAESEREDPAPAK (K) KLS(0.99)HDAES(0.0)EREDPAPAK K:TMT10,s:Phosphorylated S RREB1 184269.8 3 10 179.1 480.48 HUMAN 1 11.8609 -0.8449 LSSLLYGSIPKAAVR-p P53007;S94-p LSSLLYGSIPKAAVR 0.937852987440698 0.0527400541768121 -0.0193333333333334 0.557 0.543161723820267 17.0473882760742 -0.0193333333333334 0.557 0.882437240013693 0.0197360925197842 -0.1550022949767 3.26947417173985 P53007 SLC25A1 P53007.S94.p_SLC25A1 P53007_S94s _1_1_94_94 P53007 P53007 Tricarboxylate transport protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29964.29964.3 11.03 8.92 3.649 4 1 1 0 591.671 1693.03 S94s TMT10 86 (R) GLSSLLYGsIPK (A) GLS(0.0)S(0.0)LLY(0.0)GS(0.99)IPK K:TMT10,s:Phosphorylated S SLC25A1 34354.4 1 1 3952.1 40.32 HUMAN 1 -0.5432 17.0474 LSSPWGESSPEELRF-p Q6PJI9;S821-p LSSPWGESSPEELRF 0.504670395998139 0.545197337191569 0.093 -0.066 5.48446732672384 3.54303288603197 0.093 -0.066 0.28284810101943 0.442279399636908 1.19214515042905 -0.828576911546699 Q6PJI9 WDR59 Q6PJI9.S821.p_WDR59 Q6PJI9_S821sS822s_2_2_821_822 Q6PJI9 Q6PJI9|Q6PJI9-3|Q6PJI9-4 GATOR complex protein WDR59 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19088.19088.3 14.16 14.16 2.225 4 2 2 0 810.3451 2269.0934 S821s S822s TMT10 810 (R) EAEHLSSPWGEssPEELR (F) EAEHLS(0.0)S(0.0)PWGES(0.99)S(0.99)PEELR s:Phosphorylated S WDR59 111502.9 1 6 1731.1 118.79 HUMAN 1 5.4845 -3.543 LSSQFVISPPALRSR-p Q8WYP5-2;S2189-p LSSQFVISPPALRSR 0.879897888357523 0.0554860227632965 0.0276666666666667 -0.303 1.09316221643418 16.7317053793281 0.0276666666666667 -0.303 0.777470247627043 0.0212241087407165 0.297086656593538 -3.20758096663605 Q8WYP5 AHCTF1 Q8WYP5.2.S2189.p_AHCTF1 Q8WYP5-2_S2189s _1_1_2189_2189 Q8WYP5-2 Q8WYP5-2 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32866.32866.3 17.41 17.41 2.793 4 1 1 0 756.4039 2187.2223 S2189s TMT10 2177 (K) ELVSDLSSQFVIsPPALR (S) ELVS(0.0)DLS(0.0)S(0.0)QFVIS(0.99)PPALR s:Phosphorylated S AHCTF1 258049.6 1 35 40.1 829.79 HUMAN 1 1.0932 -16.7317 LSSRRLRSKDSVEKL-p Q9NQS7;S103-p LSSRRLRSKDSVEKL 0.227419041222077 0.0037700836580048 0.531333333333333 -1.12566666666667 12.3650261655124 35.9513786137251 0.531333333333333 -1.12566666666667 0.0580092677551321 0.000254016623343034 2.39725246555146 -8.45113060791328 Q9NQS7 INCENP Q9NQS7.S103.p_INCENP Q9NQS7_S103s _1_1_103_103 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4451.4451.3 8.38 2.58 2.377 2 1 1 0 533.9677 1519.9208 S103s Hydrogen 101 (R) LRsKDSVEK (L) LRS(0.99)KDS(0.0)VEK K:TMT10-Lys-Only,s:Phosphorylated S INCENP 105826.3 2 2 138.1 524.38 HUMAN 1 12.365 -35.9514 LSSSDRYSDASDDSF-p Q9NRF8;S568-p LSSSDRYSDASDDSF 0.638067226462082 0.14102155293819 0.0645 0.169666666666667 3.64134249659675 11.2079316701222 0.0645 0.169666666666667 0.43238015247489 0.0757193422950823 0.847919432321196 2.19156830493989 Q9NRF8 CTPS2 Q9NRF8.S568.p_CTPS2 Q9NRF8_S568sS571s_2_2_568_571 Q9NRF8 Q9NRF8 CTP synthase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13495.13495.2 8.69 6.01 1.21 8 2 2 0 1255.5 2350.0632 S568s S571s TMT10 561 (K) LSSSDRYsDAsDDSFSEPR (I) LS(0.0)S(0.0)S(0.0)DRY(0.0)S(0.99)DAS(0.99)DDS(0.0)FS(0.0)EPR s:Phosphorylated S CTPS2 66361 2 11 2509.2 80.59 HUMAN 2 3.6413 11.2079 LSSSGAPSPKGKQKQ-p Q6RI45;S1466-p LSSSGAPSPKGKQKQ 0.0241674379889842 0.00343245132342594 0.702 0.777 37.4394402799211 36.8496301735899 0.702 0.777 0.000180325012932156 0.000206555604214653 9.0563828061868 8.80072896074451 Q6RI45 BRWD3 Q6RI45.S1466.p_BRWD3 Q6RI45_S1466s _1_1_1466_1466 Q6RI45 Q6RI45|Q6RI45-2 Bromodomain and WD repeat-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8166.8166.2 13.74 8.8 2.056 9 1 1 0 952.47 1823.9751 S1466s TMT10 1454 (R) SSSSSLSSSGAPsPK (G) S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)LS(0.0)S(0.0)S(0.0)GAPS(0.99)PK K:TMT10,s:Phosphorylated S BRWD3 205362.6 1 3 1905.1 108.09 HUMAN 1 37.4394 36.8496 LSSSSSYSGDISRHH-p P33527-9;S931-p LSSSSSYSGDISRHH 0.65507204471918 0.168177048178507 -0.142 0.334666666666667 3.44392761027552 10.1850208141881 -0.142 0.334666666666667 0.452488180024067 0.0958292123542438 -0.809222659666469 2.01304292917604 P33527 ABCC1 P33527.9.S931.p_ABCC1 P33527-9_S931s _1_1_931_931 P33527-9 P33527-9|P33527-3|P33527-2|P33527-4|P33527-5|P33527-7|P33527-6 Isoform 9 of Multidrug resistance-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9845.9845.3 16.38 16.38 2.272 8 1 1 0 594.9423 1702.8445 S931s TMT10 923 (R) QLSSSSSYsGDISR (H) QLS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)Y(0.0)S(0.99)GDIS(0.0)R s:Phosphorylated S ABCC1 174063.4 1 4 3098.1 60.69 HUMAN 1 -3.4439 10.185 LSSTKLLSPQMSGEE-p P42858;S1870-p LSSTKLLSPQMSGEE 0.332973159225181 0.04531354088438 -0.157333333333333 -0.279333333333333 8.91488392768052 17.9831964822458 -0.157333333333333 -0.279333333333333 0.128384208279815 0.0159103726514426 -1.79362882104678 -3.4560393457166 P42858 HTT P42858.S1870.p_HTT P42858_S1870s _1_1_1870_1870 P42858 P42858 Huntingtin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22895.22895.3 15.78 11.84 4.636 3 1 1 0 820.0678 2378.2161 S1870s TMT10 1868 (K) LLsPQMSGEEEDSDLAAK (L) LLS(0.99)PQMS(0.0)GEEEDS(0.0)DLAAK K:TMT10,s:Phosphorylated S HTT 351590.8 1 11 343.1 353.16 HUMAN 1 -8.9149 -17.9832 LSSVRRGSGAPEAEG-p Q13554;S423-p LSSVRRGSGAPEAEG 0.417337150129418 0.0194104640401041 0.116666666666667 0.408 7.00592302477666 23.518913486049 0.116666666666667 0.408 0.199254297741402 0.00444742518827545 1.46204996671348 4.67279382431626 Q13554 CAMK2B Q13554.S423.p_CAMK2B Q13554_S423s _1_1_423_423 Q13554 Q13554 Calcium/calmodulin-dependent protein kinase type II subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22774.22774.3 18.94 18.94 12.152 4 1 1 0 1069.1977 3125.604 S423s TMT10 421 (R) RGsGAPEAEGPLPCPSPAPFSPLPAPSPR (I) RGS(0.99)GAPEAEGPLPCPS(0.0)PAPFS(0.0)PLPAPS(0.0)PR C:Carbamidomethylation,s:Phosphorylated S CAMK2B 73589.3 2 2 3471.1 50.18 HUMAN 1 7.0059 23.5189 LSTASCPTPKVQSRC-p Q9NQX3-2;T319-p LSTASCPTPKVQSRC 0.361131241199818 0.0140098145691208 0.217 -0.419666666666667 8.22055377800672 25.7200943681482 0.217 -0.419666666666667 0.15064149678061 0.00267911010961777 1.67340065705182 -5.22173368933742 Q9NQX3 GPHN Q9NQX3.2.T319.p_GPHN Q9NQX3-2_T319t _1_1_319_319 Q9NQX3-2 F5H039|Q9NQX3-2|G3V582 Isoform 2 of Gephyrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11286.11286.3 13.48 11.53 4.476 4 1 1 0 533.9453 1519.8554 T319t TMT10 312 (R) LSTASCPtPK (V) LS(0.0)T(0.0)AS(0.0)CPT(0.99)PK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T GPHN 84130.7 2 3 1469.1 139.8 HUMAN 1 8.2206 -25.7201 LSTFRQNSLGCIGEC-p A1L020;S338-p LSTFRQNSLGCIGEC 0.575409635746733 0.39359728588925 0.077 0.135333333333333 4.41359062936203 5.38373324934944 0.077 0.135333333333333 0.361943629471212 0.289485406530472 0.995407281182066 1.17368457537502 A1L020 MEX3A A1L020.S338.p_MEX3A A1L020_S338s _1_1_338_338 A1L020 A1L020 RNA-binding protein MEX3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19608.19608.3 21.91 21.91 11.213 2 1 1 0 821.3613 2382.1016 S338s TMT10 336 (R) QNsLGCIGECGVDSGFEAPR (L) QNS(0.99)LGCIGECGVDS(0.0)GFEAPR C:Carbamidomethylation,s:Phosphorylated S MEX3A 55085.2 1 2 2523.1 80 HUMAN 1 4.4136 5.3837 LSTGLDYSPPSAPRS-p P54253;S88-p LSTGLDYSPPSAPRS 0.739392972923082 0.390742774671189 0.0686666666666667 0.081 2.48562628141664 5.4263763046371 0.0686666666666667 0.081 0.564205573296583 0.286656879918874 0.613850484915121 1.18139532829204 P54253 ATXN1 P54253.S88.p_ATXN1 P54253_S88s _1_1_88_88 P54253 P54253 Ataxin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18326.18738.3 18.21 18.21 4.087 5 1 1 0 614.3069 1760.938 S88s TMT10 80 (K) ALSTGLDYsPPSAPR (S) ALS(0.0)T(0.0)GLDY(0.0)S(0.99)PPS(0.0)APR s:Phosphorylated S ATXN1 87263.4 3 1 1702.1 120.26 HUMAN 1 2.4856 5.4264 LSTLGGFSPASKPSS-p Q9UK58;S335-p LSTLGGFSPASKPSS 0.513022141775481 0.0775875582668693 -0.0903333333333333 -0.206333333333333 5.35839435557693 14.7275137798274 -0.0903333333333333 -0.206333333333333 0.291179344782688 0.0336704268433446 -1.16934906291377 -2.82569772901399 Q9UK58 CCNL1 Q9UK58.S335.p_CCNL1 Q9UK58_S335s _1_1_335_335 Q9UK58 Q9UK58|Q9UK58-6 Cyclin-L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22869.22869.4 17.44 17.44 1.25 7 1 1 0 763.1487 2969.6097 S335s TMT10 319 (K) GLNPDGTPALSTLGGFsPASKPSSPR (E) GLNPDGT(0.0)PALS(0.0)T(0.0)LGGFS(0.99)PAS(0.0)KPS(0.0)S(0.0)PR K:TMT10,s:Phosphorylated S CCNL1 60031.9 5 2 883.1 206.76 HUMAN 1 -5.3584 -14.7275 LSTNRTGSEMLQELL-p Q86U38;S107-p LSTNRTGSEMLQELL 0.525001437707283 0.0830945086271001 0.0846666666666667 0.244666666666667 5.17895911295103 14.304422440515 0.0846666666666667 0.244666666666667 0.303461841344535 0.037115708564429 1.13675445062045 2.74729259869417 Q86U38 NOP9 Q86U38.S107.p_NOP9 Q86U38_T105tS107s_2_2_105_107 Q86U38 Q86U38|Q86U38-2 Nucleolar protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33219.33219.3 7.98 6.5 5.233 3 2 2 0 795.3926 2208.235 T105t S107s M109m TMT10 105 (R) tGsEmLQELLGFSPLK (P) T(0.99)GS(0.99)EM(1.0)LQELLGFS(0.0)PLK K:TMT10,t:Phosphorylated T,s:Phosphorylated S,m:Oxidized methionine NOP9 70178.2 1 2 5090.1 23.11 HUMAN 1 5.179 14.3044 LSTPDVVSPFGTPFG-p Q9BTX1;S445-p LSTPDVVSPFGTPFG 0.362002918323239 0.0989466631496367 -0.129333333333333 -0.221333333333333 8.19895494979331 13.2782058454875 -0.129333333333333 -0.221333333333333 0.151392550308046 0.0470088271054248 -1.66965743975875 -2.55988047653812 Q9BTX1 NDC1 Q9BTX1.S445.p_NDC1 Q9BTX1_S445s _1_1_445_445 Q9BTX1 Q9BTX1|Q9BTX1-2|Q9BTX1-5|Q9BTX1-6 Nucleoporin NDC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30985.30985.2 14.08 14.08 3.558 6 1 1 0 1252.6066 2424.2431 S445s TMT10 438 (K) LSTPDVVsPFGTPFGSSVMNR (M) LS(0.0)T(0.0)PDVVS(0.99)PFGT(0.0)PFGS(0.0)S(0.0)VMNR s:Phosphorylated S NDC1 76988 1 7 1059.1 182.55 HUMAN 1 -8.199 -13.2782 LSTRRERSPGRLFED-p O14578-4;S2035-p LSTRRERSPGRLFED 0.333993034748873 0.0226469914874281 0.199 -0.366333333333333 8.89036791410099 22.4630184757949 0.199 -0.366333333333333 0.12911098921509 0.00567150282079865 1.78938510410774 -4.42381508396995 O14578 CIT O14578.4.S2035.p_CIT O14578-4_S2035s _1_1_2035_2035 O14578-4 O14578-4|O14578-3 Isoform 4 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8022.8022.4 14.21 14.21 10.064 3 1 1 0 461.9767 1764.919 S2035s TMT10 2033 (R) ERsPGRLFEDSSR (G) ERS(0.99)PGRLFEDS(0.0)S(0.0)R s:Phosphorylated S CIT 238656.7 6 18 366.1 342.11 HUMAN 1 8.8904 -22.463 LSTSRCATPNISPAT-p Q9Y597;T608-p LSTSRCATPNISPAT 0.234975861639753 0.733897651899516 0.200333333333333 -0.0363333333333333 12.055341040843 1.85245427588822 0.200333333333333 -0.0363333333333333 0.062296822533595 0.652761561147953 2.34215438172987 -0.475819473229581 Q9Y597 KCTD3 Q9Y597.T608.p_KCTD3 Q9Y597_T608tS612s_2_2_608_612 Q9Y597 Q9Y597|Q9Y597-2 BTB/POZ domain-containing protein KCTD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14996.14996.3 13.53 13.53 3.146 5 2 2 0 822.0534 2304.208 T608t S612s TMT10 606 (R) CAtPNIsPATSVVQHSHLR (E) CAT(0.99)PNIS(0.99)PAT(0.0)S(0.0)VVQHS(0.0)HLR C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S KCTD3 89667 2 17 417.1 320.81 HUMAN 1 12.0553 -1.8525 LSTSRNLSNNCDTGE-p Q92540-4;S534-p LSTSRNLSNNCDTGE 0.251085974261154 0.312934190404566 -0.206333333333333 -0.104666666666667 11.4538478961059 6.66931016006495 -0.206333333333333 -0.104666666666667 0.071550918041058 0.215312371299625 -2.23581970540026 -1.40262492585511 Q92540 SMG7 Q92540.4.S534.p_SMG7 Q92540-4_S534s_1_1_534_534 Q92540-4 Q92540-4|E9PD50|Q92540-5 Isoform 4 of Protein SMG7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18926.18926.3 9.61 9.61 1.172 3 1 1 0 897.7901 2610.4164 S534s N536n TMT10 532 (R) NLsNnCDTGEKPVVTFK (E) N(0.0)LS(0.99)N(0.0)N(0.99)CDT(0.0)GEKPVVT(0.0)FK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated SMG7 132446.2 2 2 2418.1 84.3 HUMAN 1 -11.4538 -6.6693 LSTVGWASQKKKESR-p Q9NZJ0;S410-p LSTVGWASQKKKESR 0.162446463588187 0.00177043297676807 -0.343 -0.857 15.8046511337224 43.4595747749837 -0.343 -0.857 0.0262745257975734 4.50860846922631e-05 -3.03077046993641 -11.8024828055813 Q9NZJ0 DTL Q9NZJ0.S410.p_DTL Q9NZJ0_S410s _1_1_410_410 Q9NZJ0 Q9NZJ0|F5GZ90 Denticleless protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19796.19796.2 11.7 11.7 5.751 3 1 1 0 807.9359 1534.8993 S410s TMT10 403 (K) LSTVGWAsQK (K) LS(0.0)T(0.0)VGWAS(0.99)QK K:TMT10,s:Phosphorylated S DTL 80892.7 3 2 461.1 305.23 HUMAN 1 -15.8047 -43.4596 LSVCKDKSFDDEESV-p O75122-3;S241-p LSVCKDKSFDDEESV 0.0948890980790693 0.00752314179680432 -0.482666666666667 -0.536666666666667 21.7057748624621 30.3419738031968 -0.482666666666667 -0.536666666666667 0.00675184577709756 0.000924278007992306 -4.2549698745012 -6.52634813309981 O75122 CLASP2 O75122.3.S241.p_CLASP2 O75122-3_S241s _1_1_241_241 O75122-3 O75122-3|E7EW49|E7ERI8 Isoform 3 of CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14188.14188.4 20.83 16.09 5.798 5 1 1 0 807.3926 3146.5845 S241s TMT10 239 (K) DKsFDDEESVDGNRPSSAASAFK (V) DKS(0.99)FDDEES(0.0)VDGNRPS(0.0)S(0.0)AAS(0.0)AFK K:TMT10,s:Phosphorylated S CLASP2 167005.1 4 31 158.2 498.15 HUMAN 1 -21.7058 -30.342 LSVQSNPSPQLRSVM-p O75152;S132-p LSVQSNPSPQLRSVM 0.756887047198305 0.482216750480173 -0.067 -0.0806666666666667 2.31639243596928 4.22850710580448 -0.067 -0.0806666666666667 0.586625255539099 0.377702004277637 -0.577782812218893 -0.960395052874833 O75152 ZC3H11A O75152.S132.p_ZC3H11A O75152_S132s _1_1_132_132 O75152 O75152|E9PQ61|A0A1W2PPR9 Zinc finger CCCH domain-containing protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13509.13509.2 15.66 15.66 3.276 3 1 1 0 817.9256 1554.8801 S132s TMT10 125 (K) LSVQSNPsPQLR (S) LS(0.0)VQS(0.0)NPS(0.99)PQLR s:Phosphorylated S ZC3H11A 89985.3 1 2 890.1 204.63 HUMAN 1 -2.3164 -4.2285 LSVTDGGSPVPARRA-p Q8IWQ3-5;S439-p LSVTDGGSPVPARRA 0.585907705398247 0.34425943276396 0.0846666666666667 -0.104666666666667 4.26954869839988 6.13452023680797 0.0846666666666667 -0.104666666666667 0.374149466380542 0.243527480882342 0.96831601309347 -1.3081742558116 Q8IWQ3 BRSK2 Q8IWQ3.5.S439.p_BRSK2 Q8IWQ3-5_S439s _1_1_439_439 Q8IWQ3-5 Q8IWQ3-5|Q8IWQ3-4|Q8IWQ3-2 Isoform 5 of Serine/threonine-protein kinase BRSK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16367.16367.3 11.29 11.29 2.322 4 1 1 0 723.0322 2087.1117 S439s TMT10 428 (K) SMEVLSVTDGGsPVPARR (A) S(0.0)MEVLS(0.0)VT(0.0)DGGS(0.99)PVPARR s:Phosphorylated S BRSK2 85686.4 1 1 380.2 335.31 HUMAN 1 4.2695 -6.1345 LSYASAESLETMSEA-p A0A087X165;S177-p LSYASAESLETMSEA 0.53494190060823 0.20297037548925 0.0886666666666667 -0.148 5.02863957405991 9.11128621595669 0.0886666666666667 -0.148 0.314149261122002 0.122707576391889 1.10930388947036 -1.82696278769151 A0A087X165 NotFound A0A087X165.S177.p_NotFound A0A087X165_S177s _1_1_177_177 A0A087X165 A0A087X165|Q9C0H9-5 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.32999.32999.3 22.61 22.61 2.199 7 1 1 0 933.1108 2717.3541 S177s TMT10 170 (K) LSYASAEsLETMSEAELPLGFSR (M) LS(0.0)Y(0.0)AS(0.0)AES(0.99)LET(0.0)MS(0.0)EAELPLGFS(0.0)R s:Phosphorylated S SRCIN1 130745.5 1 5 98.1 603.22 HUMAN 1 5.0286 -9.1113 LSYYKPPSPSSAEKV-p Q5SRE5;S54-p LSYYKPPSPSSAEKV 0.578200159922668 0.339091636310555 0.0746666666666667 -0.163333333333333 4.37611628141147 6.2222723769653 0.0746666666666667 -0.163333333333333 0.365080277407897 0.238656222535103 0.988375793560655 -1.32373863778719 Q5SRE5 NUP188 Q5SRE5.S54.p_NUP188 Q5SRE5_S54s _1_1_54_54 Q5SRE5 Q5SRE5|Q5SRE5-2 Nucleoporin NUP188 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25419.25419.4 16.84 16.84 1.88 6 1 1 0 684.1245 2653.5056 S54s TMT10 43 (R) LLEGLSYYKPPsPSSAEK (V) LLEGLS(0.0)Y(0.0)Y(0.0)KPPS(0.99)PS(0.0)S(0.0)AEK K:TMT10,s:Phosphorylated S NUP188 198492.8 1 1 2552.1 78.83 HUMAN 1 4.3761 -6.2223 LTADPGGSSETSSQV-p Q01831;S346-p LTADPGGSSETSSQV 0.0395731079578075 0.0036155237814501 0.531666666666667 0.603 31.4394880632422 36.3116968339 0.531666666666667 0.603 0.000717878908266604 0.000233792360901654 6.88233120054413 8.5898650452865 Q01831 XPC Q01831.S346.p_XPC Q01831_S346sS347s_2_2_346_347 Q01831 Q01831|Q01831-2 DNA repair protein complementing XP-C cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15410.15410.4 22.42 22.42 1.149 7 2 2 0 808.4018 3070.6624 S346s S347s TMT10 339 (R) LTADPGGssETSSQVLENHTKPK (T) LT(0.0)ADPGGS(0.99)S(0.99)ET(0.0)S(0.0)S(0.0)QVLENHT(0.0)KPK K:TMT10,s:Phosphorylated S XPC 106806.6 2 10 780.1 226.3 HUMAN 1 31.4395 36.3117 LTAGVPDTPTRLVFS-p P16144;T1530-p LTAGVPDTPTRLVFS 0.237800187730078 0.0487396485837475 0.174 0.284333333333333 11.9540910181493 17.5498450728522 0.174 0.284333333333333 0.0637662530350408 0.0175798632600333 2.32419425837063 3.36905701312633 P16144 ITGB4 P16144.T1530.p_ITGB4 P16144_T1530t _1_1_1530_1530 P16144 P16144|P16144-3|P16144-2|P16144-4 Integrin beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.33223.33223.4 22.68 22.68 1.691 6 1 1 0 670.3672 2598.4817 T1530t TMT10 1523 (R) LTAGVPDtPTRLVFSALGPTSLR (V) LT(0.0)AGVPDT(0.99)PT(0.0)RLVFS(0.0)ALGPT(0.0)S(0.0)LR t:Phosphorylated T ITGB4 205872.1 9 8 708.1 238.91 HUMAN 1 11.9541 17.5498 LTALLNQSRGERRGP-p Q9H2D6;S2053-p LTALLNQSRGERRGP 0.248798577375663 0.930980441078259 -0.273333333333333 0.0156666666666667 11.5288016563724 0.437319800697833 -0.273333333333333 0.0156666666666667 0.0703266344564823 0.904207322897554 -2.24902492617397 0.12608613031932 Q9H2D6 TRIOBP Q9H2D6.S2053.p_TRIOBP Q9H2D6_S2053s _1_1_2053_2053 Q9H2D6 Q9H2D6|Q9H2D6-2|Q9H2D6-3|Q9H2D6-7|Q9H2D6-5|Q9H2D6-6 TRIO and F-actin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16353.16353.4 9.45 9.45 7.604 2 1 1 0 505.532 1939.1399 S2053s TMT10 2043 (K) RVPLTALLNQsRGER (R) RVPLT(0.0)ALLNQS(0.99)RGER s:Phosphorylated S TRIOBP 264280.7 1 9 1168.1 170.4 HUMAN 1 -11.5288 0.4373 LTAPDHCSDDA____-p Q9GZR2;S419-p LTAPDHCSDDA____ 0.817235134117692 0.828040339893907 -0.0333333333333333 0.0213333333333334 1.68434683462027 1.14574133978389 -0.0333333333333333 0.0213333333333334 0.678524160746101 0.7681143275307 -0.437705361710424 0.310015734017199 Q9GZR2 REXO4 Q9GZR2.S419.p_REXO4 Q9GZR2_S419s _1_1_419_419 Q9GZR2 Q9GZR2|Q9GZR2-2 RNA exonuclease 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7673.7673.3 13.53 13.53 13.526 2 1 1 0 716.6636 2068.0079 S419s TMT10 407 (R) DRRPLLTAPDHCsDDA (-) DRRPLLT(0.0)APDHCS(0.99)DDA C:Carbamidomethylation,s:Phosphorylated S REXO4 46899.2 4 4 1288.1 157.84 HUMAN 1 -1.6843 1.1457 LTASAIVSPHGDESP-p Q9Y6J9;S495-p LTASAIVSPHGDESP 0.75107758180905 0.783107420729849 0.049 -0.034 2.36925117676399 1.47025860828292 0.049 -0.034 0.579528611829445 0.712810583303644 0.589106904989489 -0.387964928434358 Q9Y6J9 TAF6L Q9Y6J9.S495.p_TAF6L Q9Y6J9_S495s _1_1_495_495 Q9Y6J9 Q9Y6J9 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16236.16236.4 14.51 14.51 3.445 4 1 1 0 665.5992 2579.4016 S495s TMT10 484 (R) KMPQLTASAIVsPHGDESPR (G) KMPQLT(0.0)AS(0.0)AIVS(0.99)PHGDES(0.0)PR K:TMT10,s:Phosphorylated S TAF6L 68383.7 2 1 2842.1 68.26 HUMAN 1 2.3693 -1.4703 LTASRAHSLGGLDPA-p O60292;S391-p LTASRAHSLGGLDPA 0.0502987961976786 0.12137042782331 -0.550666666666667 -0.196 28.6599176349065 12.0760131381591 -0.550666666666667 -0.196 0.00136147050286813 0.062000998856845 -6.03453768672481 -2.34464586222805 O60292 SIPA1L3 O60292.S391.p_SIPA1L3 O60292_S391s _1_1_391_391 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21114.21114.3 22.93 21.28 8.501 4 1 1 0 891.1021 2591.3176 S391s TMT10 389 (R) AHsLGGLDPAFTSTEDLNCK (E) AHS(0.99)LGGLDPAFT(0.0)S(0.0)T(0.0)EDLNCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SIPA1L3 195918.6 1 10 144.1 520.25 HUMAN 1 -28.6599 -12.076 LTDPRLLSPQQPALQ-p Q14814;S180-p LTDPRLLSPQQPALQ 0.580780786438231 0.0439711539603473 0.0856666666666667 0.250666666666667 4.34134806710571 18.1696300989132 0.0856666666666667 0.250666666666667 0.368014722698127 0.0152418256727688 0.981841701733667 3.49378252445247 Q14814 MEF2D Q14814.S180.p_MEF2D Q14814_S180s _1_1_180_180 Q14814 Q14814|Q14814-2|Q14814-4|Q14814-5|Q14814-3|Q14814-6 Myocyte-specific enhancer factor 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17501.17501.3 10.97 10.97 99 1 1 1 0 520.6233 1479.8845 S180s TMT10 178 (R) LLsPQQPALQR (N) LLS(1.0)PQQPALQR s:Phosphorylated S MEF2D 56165 3 3 1187.1 168.72 HUMAN 1 4.3413 18.1696 LTDYQLVSPAKNPSS-p Q9GZR7-2;S60-p LTDYQLVSPAKNPSS 0.957211927029903 0.00278908336687029 -0.00833333333333334 -0.936 0.37318189207695 38.6491690202896 -0.00833333333333333 -0.936 0.917660019425846 0.000136484426111113 -0.10830028695981 -9.54006862526747 Q9GZR7 DDX24 Q9GZR7.2.S60.p_DDX24 Q9GZR7-2_S60s _1_1_60_60 Q9GZR7-2 Q9GZR7|Q9GZR7-2 Isoform 2 of ATP-dependent RNA helicase DDX24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37564.37564.4 26.79 26.79 1.104 3 1 1 0 1000.7175 3919.8844 S60s TMT10 34 (K) IDPNMFADGQMDDLVCFEELTDYQLVsPAK (N) IDPNMFADGQMDDLVCFEELT(0.0)DY(0.0)QLVS(0.99)PAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DDX24 90923.6 17 2 432.1 315.56 HUMAN 1 -0.3732 -38.6492 LTEAQALTPTGPSRM-p Q92917;T216-p LTEAQALTPTGPSRM 0.730340353389288 0.257676158657134 0.0513333333333333 -0.113 2.58914725490531 7.76008234953473 0.0513333333333333 -0.113 0.550915859114556 0.167491111659485 0.635652499700719 -1.59302265338477 Q92917 GPKOW Q92917.T216.p_GPKOW Q92917_T216t _1_1_216_216 Q92917 Q92917 G-patch domain and KOW motifs-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22578.22578.4 16.39 16.39 2.289 4 1 1 0 584.0575 2253.24 T216t TMT10 202 (K) GLGLGANLTEAQALtPTGPSR (M) GLGLGANLT(0.0)EAQALT(0.99)PT(0.0)GPS(0.0)R t:Phosphorylated T GPKOW 52456.1 4 6 1512.1 134.72 HUMAN 1 2.5891 -7.7601 LTEDQLPSCESLKDT-p P18669;S152-p LTEDQLPSCESLKDT 0.174431385631127 0.686183686229399 0.299666666666667 -0.0516666666666666 15.1039541704837 2.2383743985142 0.299666666666667 -0.0516666666666667 0.0308748305650073 0.597258803840687 2.89797069929307 -0.560899660395117 P18669 PGAM1 P18669.S152.p_PGAM1 P18669_S152s _1_1_152_152 P18669 P18669 Phosphoglycerate mutase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23401.23401.3 12.95 12.95 2.322 5 1 1 0 988.4915 2883.481 S152s TMT10 142 (R) YADLTEDQLPsCESLKDTIAR (A) Y(0.0)ADLT(0.0)EDQLPS(0.99)CES(0.0)LKDT(0.0)IAR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PGAM1 28917.5 1 7 1193.1 167.89 HUMAN 1 15.104 -2.2384 LTEEKVISDCECVPQ-p Q7Z4H7;S660-p LTEEKVISDCECVPQ 0.180801698912031 0.134808531328694 -0.229666666666667 -0.209 14.6526657266277 11.4707783503148 -0.229666666666667 -0.209 0.0342557458097435 0.0712725282783193 -2.81355862532856 -2.23774231942046 Q7Z4H7 HAUS6 Q7Z4H7.S660.p_HAUS6 Q7Z4H7_S660s _1_1_660_660 Q7Z4H7 Q7Z4H7|Q7Z4H7-3|Q5VY60 HAUS augmin-like complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14693.14693.3 12.59 7.06 99 1 1 1 0 624.9727 1792.9338 S660s TMT10 658 (K) VIsDCECVPQK (H) VIS(1.0)DCECVPQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HAUS6 109703.4 1 7 1302.1 156.27 HUMAN 1 -14.6527 -11.4708 LTEHLRQSWGLLGAP-p O60826;S259-p LTEHLRQSWGLLGAP 0.976601817122336 0.0761648630678251 0.00533333333333332 -0.197333333333333 0.202263490655828 14.8403925320344 0.00533333333333335 -0.197333333333333 0.954494985043668 0.032806563994039 0.0597557783260667 -2.84673650141807 O60826 CCDC22 O60826.S259.p_CCDC22 O60826_S259s _1_1_259_259 O60826 O60826 Coiled-coil domain-containing protein 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21910.21910.4 17.29 13.07 1.142 2 1 1 0 646.6004 2503.4095 S259s TMT10 251 (K) QLTEHLRQsWGLLGAPIQAR (D) QLT(0.0)EHLRQS(0.99)WGLLGAPIQAR s:Phosphorylated S CCDC22 71096.6 2 3 3114.1 60.34 HUMAN 1 0.2023 -14.8404 LTEKSQVSEDGTLRS-p Q8IV36;S633-p LTEKSQVSEDGTLRS 0.468467993613407 0.225256505978753 0.111 0.181666666666667 6.08148508327903 8.5257364647198 0.111 0.181666666666667 0.246519621169482 0.140419154442043 1.29906649143502 1.72567759987946 Q8IV36 HID1 Q8IV36.S633.p_HID1 Q8IV36_S633s _1_1_633_633 Q8IV36 Q8IV36|Q8IV36-2 Protein HID1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7645.7645.2 12.35 8.16 2.053 3 1 1 0 700.8342 1320.6957 S633s TMT10 630 (K) SQVsEDGTLR (S) S(0.0)QVS(0.99)EDGT(0.0)LR s:Phosphorylated S HID1 89370.5 1 6 589.1 264.44 HUMAN 1 6.0815 8.5257 LTEKTIYSGEENMDI-p Q8NG31;S505-p LTEKTIYSGEENMDI 0.844490429219358 0.0185756643245016 0.0316666666666667 -0.336 1.41890858767552 23.8205974767418 0.0316666666666667 -0.336 0.721288721294796 0.00414896959630448 0.375890141032605 -4.7455772228715 Q8NG31 CASC5 Q8NG31.S505.p_CASC5 Q8NG31_S505s _1_1_505_505 Q8NG31 Q8NG31|Q8NG31-2|Q8NG31-4|Q8NG31-3|E9PPJ1 Kinetochore scaffold 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19389.19389.3 12.45 12.45 3.47 4 1 1 0 680.3315 1959.0145 S505s TMT10 502 (K) TIYsGEENMDITK (S) T(0.0)IY(0.0)S(0.99)GEENMDIT(0.0)K K:TMT10,s:Phosphorylated S KNL1 268353.4 1 3 650.1 254.2 HUMAN 1 1.4189 -23.8206 LTENLTGSKRRPQTP-p P46013;S1329-p LTENLTGSKRRPQTP 0.282502869387563 0.0353464285784779 -0.202 -0.487 10.3772813166677 19.5409820915649 -0.202 -0.487 0.0916794223682424 0.0111148035431761 -2.04734018177666 -3.77769348248682 P46013 MKI67 P46013.S1329.p_MKI67 P46013_S1329s _1_1_1329_1329 P46013 P46013 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22995.22995.3 16.73 16.73 2.1 3 1 1 0 576.9769 1648.9522 S1329s TMT10 1320 (K) LDLTENLTGsK (R) LDLT(0.0)ENLT(0.0)GS(0.99)K K:TMT10,s:Phosphorylated S MKI67 360912.4 2 40 5.1 1918.46 HUMAN 1 -10.3773 -19.541 LTETGVVSPEQFMKS-p Q96EK6;S67-p LTETGVVSPEQFMKS 0.834117503246035 0.159223481457119 0.0353333333333333 0.162 1.52048288331994 10.496835218946 0.0353333333333333 0.162 0.704614719914654 0.0891900645225697 0.399781129313522 2.06729239471508 Q96EK6 GNPNAT1 Q96EK6.S67.p_GNPNAT1 Q96EK6_S67s _1_1_67_67 Q96EK6 Q96EK6 Glucosamine 6-phosphate N-acetyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32532.32532.3 16.31 16.31 4.089 3 1 1 0 834.44 2421.3464 S67s TMT10 56 (K) VLGQLTETGVVsPEQFMK (S) VLGQLT(0.0)ET(0.0)GVVS(0.99)PEQFMK K:TMT10,s:Phosphorylated S GNPNAT1 21091.1 2 2 2517.1 80.28 HUMAN 1 1.5205 10.4968 LTETKDGSGLEEKVR-p P49321-3;S410-p LTETKDGSGLEEKVR 0.810035198209422 0.57528637484922 -0.05 -0.0603333333333333 1.75726530176838 3.23813699771082 -0.05 -0.0603333333333333 0.667226781350907 0.474445465495318 -0.45434947154226 -0.768266307893477 P49321 NASP P49321.3.S410.p_NASP P49321-3_S410s _1_1_410_410 P49321-3 P49321-3|P49321-4 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13289.13289.3 13.1 6.85 1.475 3 1 1 0 725.3909 2094.1897 S410s TMT10 403 (R) LTETKDGsGLEEK (V) LT(0.0)ET(0.0)KDGS(0.99)GLEEK K:TMT10,s:Phosphorylated S NASP 86552 1 14 87.1 626.46 HUMAN 1 -1.7573 -3.2381 LTFDSSFSPNTGKKN-p P21796;S104-p LTFDSSFSPNTGKKN 0.485569312354018 0.0349804234782163 0.100666666666667 0.280666666666667 5.78096985962305 19.607505497819 0.100666666666667 0.280666666666667 0.264181872462915 0.0109458489380627 1.24544516653864 3.79175898871437 P21796 VDAC1 P21796.S104.p_VDAC1 P21796_S104s _1_1_104_104 P21796 P21796 Voltage-dependent anion-selective channel protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19902.20602.3 18.97 13.85 2.128 5 1 1 0 766.0775 2216.253 S104s TMT10 97 (K) LTFDSSFsPNTGKK (N) LT(0.0)FDS(0.0)S(0.0)FS(0.99)PNT(0.0)GKK K:TMT10,s:Phosphorylated S VDAC1 30886.1 12 6 1468.1 139.85 HUMAN 1 5.781 19.6075 LTFDTTFSPNTGKKS-p P45880-1;S130-p LTFDTTFSPNTGKKS 0.965008281668802 0.0439711539603473 -0.00766666666666667 0.277666666666667 0.298545973718683 18.16870699736 -0.00766666666666668 0.277666666666667 0.933566808443658 0.0152450656974345 -0.0873077358944741 3.49359515838803 P45880 VDAC2 P45880.1.S130.p_VDAC2 P45880-1_S130s _1_1_130_130 P45880-1 P45880-1|P45880-2 Isoform 1 of Voltage-dependent anion-selective channel protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21318.21318.4 16.14 16.14 1.164 5 1 1 0 581.82 2244.2843 S130s TMT10 123 (K) LTFDTTFsPNTGKK (S) LT(0.0)FDT(0.0)T(0.0)FS(0.99)PNT(0.0)GKK K:TMT10,s:Phosphorylated S VDAC2 33884.5 16 6 1760.1 117.1 HUMAN 1 -0.2985 18.1687 LTFGDVDTSDEKSAQ-p A0A1C7CYX1;T893-p LTFGDVDTSDEKSAQ 0.135600070487343 0.0245411210499566 -0.454 0.428666666666667 17.7981866369235 21.9150075034171 -0.454 0.428666666666667 0.016602799998244 0.00643426953326091 -3.42153675621734 4.2979983362309 A0A1C7CYX1 NotFound A0A1C7CYX1.T893.p_NotFound A0A1C7CYX1_T893t _1_1_893_893 A0A1C7CYX1 A0A1C7CYX1|Q6PJG2 ELM2 and SANT domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18612.18612.2 18.38 18.38 1.379 4 1 1 0 1069.0101 2057.0439 T893t TMT10 883 (R) NGTLTFGDVDtSDEK (S) NGT(0.0)LT(0.0)FGDVDT(0.99)S(0.0)DEK K:TMT10,t:Phosphorylated T ELMSAN1 121244.8 5 9 548.1 275.48 HUMAN 1 -17.7982 21.915 LTFTVPISPGRRKTE-p I3L2J0;S710-p LTFTVPISPGRRKTE 0.51416439804261 0.705468251429682 0.0906666666666667 0.0483333333333333 5.3376057854644 2.0814046101622 0.0906666666666667 0.0483333333333333 0.292576487318271 0.619240765706224 1.16558200206714 0.526693067216113 I3L2J0 NotFound I3L2J0.S710.p_NotFound I3L2J0_S710s _1_1_710_710 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25912.25912.4 15.66 15.66 1.248 7 1 1 0 677.3501 2626.41 S710s Hydrogen 691 (R) HSSGILPTFQTNLTFTVPIsPGRR (K) HS(0.0)S(0.0)GILPT(0.0)FQT(0.0)NLT(0.0)FT(0.0)VPIS(0.99)PGRR s:Phosphorylated S CIC 259056.7 7 14 23.1 999.57 HUMAN 1 5.3376 2.0814 LTGKQQVSPIRNLSD-p Q9UG63-2;S512-p LTGKQQVSPIRNLSD 0.664488827121985 0.0374019841771883 0.0593333333333333 -0.290333333333333 3.31960145154172 19.1758775010489 0.0593333333333333 -0.290333333333333 0.46562882193468 0.0120896088519798 0.784611920846862 -3.70099194070915 Q9UG63 ABCF2 Q9UG63.2.S512.p_ABCF2 Q9UG63-2_S512s _1_1_512_512 Q9UG63-2 Q9UG63-2 Isoform 2 of ATP-binding cassette sub-family F member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12746.12746.3 12.05 12.05 3.746 2 1 1 0 703.3808 2028.1602 S512s TMT10 509 (K) QQVsPIRNLSDGQK (C) QQVS(0.99)PIRNLS(0.0)DGQK K:TMT10,s:Phosphorylated S ABCF2 73070 1 3 3726.1 44.44 HUMAN 1 3.3196 -19.1759 LTGPRLGSPSGKTGT-p Q09666;S559-p LTGPRLGSPSGKTGT 0.108274227113564 0.0366174590304603 0.481333333333333 -0.312 20.2744494256197 19.3253533390509 0.481333333333333 -0.312 0.00938761040030132 0.0116805869353064 3.93809929632197 -3.73229341334261 Q09666 AHNAK Q09666.S559.p_AHNAK Q09666_S559s _1_1_559_559 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10451.10451.2 9.96 6.18 1.348 2 1 1 0 592.3279 1103.6825 S559s TMT10 557 (R) LGsPSGK (T) LGS(0.99)PS(0.0)GK K:TMT10,s:Phosphorylated S AHNAK 629603.7 10 30 1.1 4313.36 HUMAN 1 20.2744 -19.3254 LTGWRPGSGFTNTMR-p P14618;S519-p LTGWRPGSGFTNTMR 0.29470932998648 0.00643197596649139 0.152 0.504666666666667 10.0139458554742 31.5128115464922 0.152 0.504666666666667 0.099679399834163 0.000705860444614332 1.98413343424496 6.89427531419002 P14618 PKM P14618.S519.p_PKM P14618_S519s _1_1_519_519 P14618 P14618|P14618-3|B4DNK4|H3BR70|P14618-2 Pyruvate kinase PKM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26842.26842.3 15.33 15.33 1.12 4 1 1 0 977.1893 2849.586 S519s TMT10 505 (K) KGDVVIVLTGWRPGsGFTNTMR (V) KGDVVIVLT(0.0)GWRPGS(0.99)GFT(0.0)NT(0.0)MR K:TMT10,s:Phosphorylated S PKM 58506.4 8 16 502.1 291.2 HUMAN 1 10.0139 31.5128 LTHILDGSPEKTRRR-p Q15067-2;S26-p LTHILDGSPEKTRRR 0.89801806103268 0.0257079144253812 0.0206666666666667 -0.311666666666667 0.915257016527728 21.6262905316924 0.0206666666666667 -0.311666666666667 0.809980005448751 0.00687655541041516 0.252484342065372 -4.2326125287692 Q15067 ACOX1 Q15067.2.S26.p_ACOX1 Q15067-2_S26s _1_1_26_26 Q15067-2 Q15067|Q15067-2|I3L0T4|I3L2U4 Isoform 2 of Peroxisomal acyl-coenzyme A oxidase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32004.32004.3 23.99 23.99 6.356 4 1 1 0 903.4582 2628.3921 S26s TMT10 10 (R) DSASFNPELLTHILDGsPEK (T) DS(0.0)AS(0.0)FNPELLT(0.0)HILDGS(0.99)PEK K:TMT10,s:Phosphorylated S ACOX1 75179.9 10 2 1619.1 127.14 HUMAN 1 0.9153 -21.6263 LTHQELASDGEIETK-p Q02241;S867-p LTHQELASDGEIETK 0.843942307663143 0.777585961378643 -0.028 0.0416666666666667 1.42645523482434 1.51211279900715 -0.028 0.0416666666666667 0.720036440855863 0.705974021440829 -0.377675681328234 0.397781452421626 Q02241 KIF23 Q02241.S867.p_KIF23 Q02241_S867s _1_1_867_867 Q02241 Q02241|H7BYN4|Q02241-2|Q02241-3 Kinesin-like protein KIF23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17901.17901.3 20.84 18.39 5.258 4 1 1 0 835.0765 2423.2528 S867s TMT10 858 (K) YMLTHQELAsDGEIETK (L) Y(0.0)MLT(0.0)HQELAS(0.99)DGEIET(0.0)K K:TMT10,s:Phosphorylated S KIF23 111083.9 10 12 352.1 350.35 HUMAN 1 -1.4265 1.5121 LTHSRRGSMSSVTKL-p Q9H2E6-2;S715-p LTHSRRGSMSSVTKL 0.101579897001821 0.617980273839402 -0.462 -0.0646666666666667 20.9982429792579 2.84194771432001 -0.462 -0.0646666666666667 0.0079464966030053 0.519762842161318 -4.09653502668072 -0.688029422494354 Q9H2E6 SEMA6A Q9H2E6.2.S715.p_SEMA6A Q9H2E6-2_S715s _1_1_715_715 Q9H2E6-2 Q9H2E6-2|A0A0A0MQU6|B3KU01|E9PDV9 Isoform 2 of Semaphorin-6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.6624.6624.3 7.86 7.86 2.291 4 1 1 0 497.5984 1410.8139 S715s TMT10 713 (R) RGsMSSVTK (L) RGS(0.99)MS(0.0)S(0.0)VT(0.0)K K:TMT10,s:Phosphorylated S SEMA6A 117646 3 2 3856.1 41.63 HUMAN 1 -20.9982 -2.8419 LTHTDSQSDAETAAA-p Q92766;S1273-p LTHTDSQSDAETAAA 0.312108084398821 0.17601998354481 0.145666666666667 0.146666666666667 9.46068032491895 9.9213485132829 0.145666666666667 0.146666666666667 0.113222298593081 0.10182751577444 1.88814424593554 1.96726068446862 Q92766 RREB1 Q92766.S1273.p_RREB1 Q92766_S1273s _1_1_1273_1273 Q92766 Q92766|A0A087X055 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20098.20098.3 14.5 14.5 1.218 7 1 1 0 1046.1534 3056.4792 S1273s TMT10 1264 (R) HMLTHTDSQsDAETAAAAGEVLDLTSR (D) HMLT(0.0)HT(0.0)DS(0.0)QS(0.99)DAET(0.0)AAAAGEVLDLT(0.0)S(0.0)R s:Phosphorylated S RREB1 184269.8 1 24 179.1 480.48 HUMAN 1 9.4607 9.9213 LTILGSPSPERMGPA-p Q96A19;S28-p LTILGSPSPERMGPA 0.41753786105906 0.226253263847612 -0.185333333333333 -0.460666666666667 7.00100064641079 8.49962735251081 -0.185333333333333 -0.460666666666667 0.199480264482229 0.141265875296755 -1.46118836911495 -1.72116018958051 Q96A19 CCDC102A Q96A19.S28.p_CCDC102A Q96A19_S28s _1_1_28_28 Q96A19 Q96A19 Coiled-coil domain-containing protein 102A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28226.28226.3 17.84 17.84 2.206 4 1 1 0 579.3114 1655.953 S28s TMT10 18 (K) GSLLTILGSPsPER (M) GS(0.0)LLT(0.0)ILGS(0.0)PS(0.99)PER s:Phosphorylated S CCDC102A 62823.1 1 3 4345.1 33.11 HUMAN 1 -7.001 -8.4996 LTKAADISLDNLVEG-p Q12888-2;S1623-p LTKAADISLDNLVEG 0.932151691896397 0.00222682980082593 -0.0126666666666667 -0.77 0.604262454426568 41.1344764895804 -0.0126666666666667 -0.77 0.87010918780707 7.70109269834926e-05 -0.171436614899474 -10.653592565117 Q12888 TP53BP1 Q12888.2.S1623.p_TP53BP1 Q12888-2_S1623s _1_1_1623_1623 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26165.26165.2 17.79 15.9 99 1 1 1 0 941.9979 1803.0264 S1623s TMT10 1619 (K) AADIsLDNLVEGK (R) AADIS(1.0)LDNLVEGK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 8 66 3.1 2297.07 HUMAN 1 -0.6043 -41.1345 LTKAKDDSELEGQVI-p Q92896-2;S961-p LTKAKDDSELEGQVI 0.373935912464191 0.321514457655667 -0.121666666666667 0.105666666666667 7.91071937919621 6.51495393479961 -0.121666666666667 0.105666666666667 0.161781203591491 0.223102587163452 -1.61966890304088 1.37545771520325 Q92896 GLG1 Q92896.2.S961.p_GLG1 Q92896-2_S961s _1_1_961_961 Q92896-2 Q92896-2|Q92896-3 Isoform 2 of Golgi apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22394.22394.4 13.98 13.98 11.952 2 1 1 0 640.5882 2479.3681 S961s TMT10 957 (K) AKDDsELEGQVISCLK (L) AKDDS(0.99)ELEGQVIS(0.0)CLK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GLG1 141099.2 2 3 3481.1 49.97 HUMAN 1 -7.9107 6.515 LTKDFSNSPLHRFKK-p O95758-4;S460-p LTKDFSNSPLHRFKK 0.18863765659071 0.971824130722009 0.272666666666667 -0.00599999999999999 14.2092872379276 0.175209786218582 0.272666666666667 -0.006 0.0379377243080344 0.960459422214252 2.73142553233212 -0.0519097466238915 O95758 PTBP3 O95758.4.S460.p_PTBP3 O95758-4_S460s _1_1_460_460 O95758-4 O95758-4|O95758-5|O95758-2|O95758-6|O95758-1|O95758-7 Isoform 4 of Polypyrimidine tract-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8023.8023.3 10.4 10.4 3.547 2 1 1 0 461.2205 1301.68 S460s TMT10 456 (K) DFSNsPLHR (F) DFS(0.0)NS(0.99)PLHR s:Phosphorylated S PTBP3 60701.5 1 4 2265.1 90.69 HUMAN 1 14.2093 -0.1752 LTKDYGNSPLHRFKK-p A0A0U1RRM4;S490-p LTKDYGNSPLHRFKK 0.678232012441015 0.639272089786122 -0.0563333333333333 -0.128666666666667 3.15566325239594 2.64696564544489 -0.0563333333333333 -0.128666666666667 0.483541412456281 0.543630025497924 -0.75185574741909 -0.647662338555323 A0A0U1RRM4 NotFound A0A0U1RRM4.S490.p_NotFound A0A0U1RRM4_S490s _1_1_490_490 A0A0U1RRM4 A0A0U1RRM4|P26599-3|P26599-2|A6NLN1|A0A0D9SF20 Polypyrimidine tract-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5963.5963.3 9.15 9.15 8.025 2 1 1 0 456.549 1287.6643 S490s TMT10 486 (K) DYGNsPLHR (F) DY(0.0)GNS(0.99)PLHR s:Phosphorylated S PTBP1 62691.3 1 7 1244.1 162.7 HUMAN 1 -3.1557 -2.647 LTKFFTPSPDGRKAR-p Q92794;S420-p LTKFFTPSPDGRKAR 0.250291423323306 0.060823761953924 -0.175333333333333 -0.250333333333333 11.4830492916717 16.1989989636537 -0.175333333333333 -0.250333333333333 0.0710714327878762 0.0239938590686772 -2.24096290226559 -3.10426664153924 Q92794 KAT6A Q92794.S420.p_KAT6A Q92794_S420s _1_1_420_420 Q92794 Q8WYB5|Q92794|Q8WYB5-2|A5PLL3 Histone acetyltransferase KAT6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18193.18193.2 11.6 6.55 1.638 2 1 1 0 666.8137 1252.6524 S420s TMT10 416 (K) FFTPsPDGR (K) FFT(0.0)PS(0.99)PDGR s:Phosphorylated S KAT6A 227705.4 3 8 903.1 203.52 HUMAN 1 -11.483 -16.199 LTKSLPASPSTSDFC-p Q9Y2D8-3;S513-p LTKSLPASPSTSDFC 0.55827821703547 0.00352153983654335 0.0986666666666667 -0.689666666666667 4.67343365947904 36.6580034496863 0.0986666666666667 -0.689666666666667 0.340923261115427 0.000215873660128526 1.04385822124607 -8.72509397611639 Q9Y2D8 SSX2IP Q9Y2D8.3.S513.p_SSX2IP Q9Y2D8-3_S513s _1_1_513_513 Q9Y2D8-3 Q9Y2D8|Q9Y2D8-3|Q9Y2D8-2|S4R2Y6 Isoform 3 of Afadin- and alpha-actinin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14423.14423.3 12.28 12.28 1.151 6 1 1 0 654.9654 1882.9166 S513s TMT10 509 (K) SLPAsPSTSDFCQTR (S) S(0.0)LPAS(0.99)PS(0.0)T(0.0)S(0.0)DFCQT(0.0)R C:Carbamidomethylation,s:Phosphorylated S SSX2IP 69071.5 2 6 1943.1 106.03 HUMAN 1 4.6734 -36.658 LTKSTRLTMTRNAVW-p O60684;T225-p LTKSTRLTMTRNAVW 0.241704142736427 0.571669407112353 -0.204666666666667 0.0546666666666667 11.7928198896405 3.27342502899315 -0.204666666666667 0.0546666666666667 0.0661786663715284 0.470606040288379 -2.29563964906153 0.775306682474 O60684 KPNA6 O60684.T225.p_KPNA6 O60684_T225t _1_1_225_225 O60684 O60684 Importin subunit alpha-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6285.6285.3 9.15 9.15 2.548 4 1 1 0 425.5544 1194.6826 T225t TMT10 221 (K) STRLtMTR (N) S(0.0)T(0.0)RLT(0.99)MT(0.0)R t:Phosphorylated T KPNA6 60770.1 1 2 3759.1 43.77 HUMAN 1 -11.7928 3.2734 LTKTASESISNLSEA-p P30622;S195-p LTKTASESISNLSEA 0.841204483666408 0.0644841419775167 -0.0336666666666667 -0.229666666666667 1.45067621471742 15.850486417683 -0.0336666666666667 -0.229666666666667 0.716031912361853 0.0259986835689451 -0.383394840232256 -3.03741304253915 P30622 CLIP1 P30622.S195.p_CLIP1 P30622_S195s _1_1_195_195 P30622 P30622|P30622-1|P30622-2|J3KP58|F5H1T5 CAP-Gly domain-containing linker protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16824.16824.3 19.86 19.86 1.107 6 1 1 0 830.4556 2409.3804 S195s TMT10 191 (K) TASEsISNLSEAGSIKK (G) T(0.0)AS(0.0)ES(0.99)IS(0.0)NLS(0.0)EAGS(0.0)IKK K:TMT10,s:Phosphorylated S CLIP1 162985.2 5 6 372.1 339.16 HUMAN 1 -1.4507 -15.8505 LTLANNVTPAKDVPP-p E7EVA0;T588-p LTLANNVTPAKDVPP 0.112544694105773 0.00512820455408824 -0.392 -0.514333333333333 19.7980051601677 33.3307216651151 -0.392 -0.514333333333333 0.0104760963487864 0.000464438093348921 -3.83573358289103 -7.49943786765769 E7EVA0 NotFound E7EVA0.T588.p_NotFound E7EVA0_T588t _1_1_588_588 E7EVA0 E7EVA0|P27816|P27816-6 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28984.28984.4 23.05 20.13 4.337 5 1 1 0 964.2872 3774.1508 T588t TMT10 578 (K) DGVLTLANNVtPAKDVPPLSETEATPVPIK (D) DGVLT(0.0)LANNVT(0.99)PAKDVPPLS(0.0)ET(0.0)EAT(0.0)PVPIK K:TMT10,t:Phosphorylated T MAP4 246695.2 10 15 38.1 865.62 HUMAN 1 -19.798 -33.3307 LTLAPGLSPARPLFG-p Q8IU81;S186-p LTLAPGLSPARPLFG 0.93698049113563 0.0235607251950185 -0.014 -0.317333333333333 0.549394882060705 22.2009583656292 -0.014 -0.317333333333333 0.881171641231981 0.00602426632811161 -0.156687083176044 -4.36336669274536 Q8IU81 IRF2BP1 Q8IU81.S186.p_IRF2BP1 Q8IU81_S186s _1_1_186_186 Q8IU81 Q8IU81 Interferon regulatory factor 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30169.30169.4 17.85 17.85 4.44 3 1 1 0 678.6216 2631.491 S186s TMT10 178 (R) GLTLAPGLsPARPLFGSDFEK (E) GLT(0.0)LAPGLS(0.99)PARPLFGS(0.0)DFEK K:TMT10,s:Phosphorylated S IRF2BP1 62599.7 2 3 274.1 392.67 HUMAN 1 -0.5494 -22.201 LTLGPSLSLGSISGV-p O75128-2;S309-p LTLGPSLSLGSISGV 0.0983866986781605 0.347503208437812 0.355333333333333 -0.111666666666667 21.315356070115 6.08511230273955 0.355333333333333 -0.111666666666667 0.00738693696363571 0.246313814395639 4.16709998758947 -1.29939823509801 O75128 COBL O75128.2.S309.p_COBL O75128-2_S309s _1_1_309_309 O75128-2 O75128-4|A0A0J9YWK3|O75128-5|O75128-2|O75128-7 Isoform 2 of Protein cordon-bleu HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33492.33492.3 15.32 15.32 1.11 7 1 1 0 780.7789 2260.3528 S309s TMT10 301 (R) SLTLGPSLsLGSISGVSVK (S) S(0.0)LT(0.0)LGPS(0.0)LS(0.99)LGS(0.0)IS(0.0)GVS(0.0)VK K:TMT10,s:Phosphorylated S COBL 144838.3 3 8 254.1 405.31 HUMAN 1 21.3154 -6.0851 LTLGRSFSNYRPFEP-p Q99611;S33-p LTLGRSFSNYRPFEP 0.453084565513813 0.210184640168216 0.101 0.196333333333333 6.34458446690853 8.91112926060331 0.101 0.196333333333333 0.232028618000104 0.128495250075787 1.3457244160807 1.79234109710136 Q99611 SEPHS2 Q99611.S33.p_SEPHS2 Q99611_S33s _1_1_33_33 Q99611 Q99611 Selenide, water dikinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27482.27482.3 13.34 13.34 1.154 5 1 1 0 883.4327 2568.3197 S33s TMT10 31 (R) SFsNYRPFEPQALGLSPSWR (L) S(0.0)FS(0.99)NY(0.0)RPFEPQALGLS(0.0)PS(0.0)WR s:Phosphorylated S SEPHS2 47747 3 1 3602.1 47.29 HUMAN 1 6.3446 8.9111 LTLKEERSPQTLAPV-p Q92797;S1243-p LTLKEERSPQTLAPV 0.38996170793626 0.00430383606637292 -0.359 0.608333333333333 7.56575479573062 34.781555407569 -0.359 0.608333333333333 0.175155799023305 0.000332540433995094 -1.5597264480267 8.01414153183946 Q92797 SYMPK Q92797.S1243.p_SYMPK Q92797_S1243s _1_1_1243_1243 Q92797 Q92797 Symplekin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14562.14562.5 23.43 17.22 4.682 4 1 1 0 835.824 4095.1272 S1243s TMT10 1240 (K) EERsPQTLAPVGEDAMKTPSPAAEDAREPEAK (G) EERS(0.99)PQT(0.0)LAPVGEDAMKT(0.0)PS(0.0)PAAEDAREPEAK K:TMT10,s:Phosphorylated S SYMPK 142001.7 4 9 808.1 221.39 HUMAN 1 -7.5658 34.7816 LTLPLYQSPVKELDK-p P51587;S93-p LTLPLYQSPVKELDK 0.146990936939054 0.00176923659520671 -0.273333333333333 -0.989 16.9079436443093 43.5143537570015 -0.273333333333333 -0.989 0.0203800683206112 4.45209706508836e-05 -3.24452542786038 -11.8308916211405 P51587 BRCA2 P51587.S93.p_BRCA2 P51587_S93s _1_1_93_93 P51587 P51587 Breast cancer type 2 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26094.26094.3 15.71 15.71 3.473 3 1 1 0 704.3911 2031.189 S93s TMT10 83 (K) EQGLTLPLYQsPVK (E) EQGLT(0.0)LPLY(0.0)QS(0.99)PVK K:TMT10,s:Phosphorylated S BRCA2 388531.4 3 1 876.1 208.99 HUMAN 1 -16.9079 -43.5144 LTLSQSKSNEDSLIL-p A0A0U1RRH6;S298-p LTLSQSKSNEDSLIL 0.125743941781331 0.0117022337525004 -0.709 0.641666666666667 18.7143823537633 27.0138119509305 -0.709 0.641666666666667 0.0134450296600346 0.0019889268236386 -3.60831330830335 5.56488376255399 A0A0U1RRH6 NotFound A0A0U1RRH6.S298.p_NotFound A0A0U1RRH6_S298s _1_1_298_298 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20179.20179.3 13.55 8.89 3.334 2 1 1 0 562.6308 1605.91 S298s TMT10 298 (K) sNEDSLILEK (S) S(0.99)NEDS(0.0)LILEK K:TMT10,s:Phosphorylated S PHF14 109152.4 1 10 126.1 543.2 HUMAN 1 -18.7144 27.0138 LTLTTSQSLPKPSSH-p Q9BYI3;S433-p LTLTTSQSLPKPSSH 0.300478673172259 0.473289162650841 -0.151333333333333 -0.108 9.81515279767778 4.33187310913449 -0.151333333333333 -0.108 0.1043481419312 0.368818493097382 -1.94961335861545 -0.979883044024845 Q9BYI3 FAM126A Q9BYI3.S433.p_FAM126A Q9BYI3_S433s _1_1_433_433 Q9BYI3 Q9BYI3|Q9BYI3-2 Hyccin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15530.15530.4 16.48 16.48 1.176 7 1 1 0 723.1716 2809.6867 S433s TMT10 425 (K) RLTLTTSQsLPKPSSHGLAK (T) RLT(0.0)LT(0.0)T(0.0)S(0.0)QS(0.99)LPKPS(0.0)S(0.0)HGLAK K:TMT10,s:Phosphorylated S FAM126A 58366.1 3 4 2241.1 92.02 HUMAN 1 -9.8152 -4.3319 LTLWTSDSAGEECDA-p P27348;S232-p LTLWTSDSAGEECDA 0.899853160329925 0.0224755319034756 -0.0336666666666667 0.330666666666667 0.896733489102052 22.5124612449836 -0.0336666666666667 0.330666666666667 0.813442110051138 0.00560730107544376 -0.247770673736546 4.43527863407471 P27348 YWHAQ P27348.S232.p_YWHAQ P27348_S232s _1_1_232_232 P27348 P27348 14-3-3 protein theta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25768.25768.2 13.57 13.57 1.113 4 1 1 0 1382.5636 2684.1467 S232s TMT10 223 (R) DNLTLWTSDsAGEECDAAEGAEN (-) DNLT(0.0)LWT(0.0)S(0.0)DS(0.99)AGEECDAAEGAEN C:Carbamidomethylation,s:Phosphorylated S YWHAQ 28049 4 2 2349.4 87.09 HUMAN 1 -0.8967 22.5125 LTNLSSNSDV_____-p Q13641;S418-p LTNLSSNSDV_____ 0.156281344285149 0.723327199460553 -0.379666666666667 -0.0476666666666667 16.1797736210179 1.93592576799806 -0.379666666666667 -0.0476666666666667 0.024100310499366 0.640335269338087 -3.10278522463118 -0.49450837297193 Q13641 TPBG Q13641.S418.p_TPBG Q13641_S418s _1_1_418_418 Q13641 Q13641 Trophoblast glycoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18447.18447.2 11.32 11.32 2.456 4 1 1 0 679.8237 1278.6739 S418s TMT10 411 (R) LTNLSSNsDV (-) LT(0.0)NLS(0.0)S(0.0)NS(0.99)DV s:Phosphorylated S TPBG 46601.6 2 2 6497.1 11.32 HUMAN 1 -16.1798 -1.9359 LTNSGKRSPACSSLT-p Q96R06;S43-p LTNSGKRSPACSSLT 0.332895452588847 0.0091954011757838 -0.142333333333333 -0.560333333333333 8.91683506283474 28.7796341679015 -0.142333333333333 -0.560333333333333 0.128326542642438 0.00132445309706554 -1.79396656391693 -6.06015284318543 Q96R06 SPAG5 Q96R06.S43.p_SPAG5 Q96R06_S43s _1_1_43_43 Q96R06 Q96R06|J3QRV8|J3KSV2 Sperm-associated antigen 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21321.21321.4 14.53 14.53 1.126 8 1 1 0 936.0005 3661.002 S43s TMT10 28 (R) ELTLQPGALTNSGKRsPACSSLTPSLCK (L) ELT(0.0)LQPGALT(0.0)NS(0.0)GKRS(0.99)PACS(0.0)S(0.0)LT(0.0)PS(0.0)LCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SPAG5 135788.8 3 2 612.1 261.64 HUMAN 1 -8.9168 -28.7796 LTNSSAPSPSHKVQR-p E9PC69;S390-p LTNSSAPSPSHKVQR 0.0519392035511989 0.0122559341837144 -0.578333333333333 -0.554 28.1038160725261 26.6924340271233 -0.578333333333333 -0.554 0.00154745629754737 0.00214168994287806 -5.87531791948216 -5.47814046975688 E9PC69 NotFound E9PC69.S390.p_NotFound E9PC69_S390s _1_1_390_390 E9PC69 Q7KZI7|Q7KZI7-8|E9PC69|Q7KZI7-11|Q7KZI7-6|Q7KZI7-3|Q7KZI7-14|Q7KZI7-12|Q7KZI7-9|Q7KZI7-4|Q7KZI7-16|Q7KZI7-5|Q7KZI7-15|Q7KZI7-2|E7ETY4|Q7KZI7-7|Q7KZI7-13|Q7KZI7-10 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16263.16263.4 20.61 19.1 3.421 10 1 1 0 973.2605 3810.0488 S390s TMT10 365 (K) SSELEGDTITLKPRPSADLTNSSAPsPSHK (V) S(0.0)S(0.0)ELEGDT(0.0)IT(0.0)LKPRPS(0.0)ADLT(0.0)NS(0.0)S(0.0)APS(0.99)PS(0.0)HK K:TMT10,s:Phosphorylated S MARK2 87089.2 2 4 200.1 451.67 HUMAN 1 -28.1038 -26.6924 LTPEKALSGYCGFMA-p P53618;S885-p LTPEKALSGYCGFMA 0.704371473235441 0.502074872755939 0.088 0.079 2.86209384349897 4.00619718138693 0.088 0.079 0.517357340758184 0.39753949515396 0.692260058536301 0.918158328295571 P53618 COPB1 P53618.S885.p_COPB1 P53618_S885s _1_1_885_885 P53618 P53618 Coatomer subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27881.27881.3 19.27 19.27 3.404 3 1 1 0 691.9861 1993.9826 S885s TMT10 883 (K) ALsGYCGFMAANLYAR (S) ALS(0.99)GY(0.0)CGFMAANLY(0.0)AR C:Carbamidomethylation,s:Phosphorylated S COPB1 108281.4 1 3 3508.1 49.52 HUMAN 1 2.8621 4.0062 LTPKAVGTPGGGGGG-p P48634;T1353-p LTPKAVGTPGGGGGG 0.472422836600032 0.143220511057626 0.114333333333333 0.195 6.00370173991549 11.1192878567863 0.114333333333333 0.195 0.250974631943767 0.0772807297355559 1.28522299843747 2.17602750729515 P48634 PRRC2A P48634.T1353.p_PRRC2A P48634_T1353t _1_1_1353_1353 P48634 P48634 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17859.17859.3 17.31 17.31 12.59 3 1 1 0 689.0079 1985.0436 T1353t TMT10 1350 (K) AVGtPGGGGGGAVPGISAMSR (G) AVGT(0.99)PGGGGGGAVPGIS(0.0)AMS(0.0)R t:Phosphorylated T PRRC2A 229315.4 1 29 36.1 882.05 HUMAN 1 6.0037 11.1193 LTPPESQSPLHWLAD-p Q15652;S2007-p LTPPESQSPLHWLAD 0.78149643092872 0.344073057628201 0.047 0.109666666666667 2.05444745496854 6.13789416636231 0.047 0.109666666666667 0.623096417818958 0.243338363699432 0.520826338959329 1.30877320833591 Q15652 JMJD1C Q15652.S2007.p_JMJD1C Q15652_S2005sS2007s_2_2_2005_2007 Q15652 Q15652|Q15652-3|A0A1W2PNZ9 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34807.34807.4 13.78 13.78 1.133 7 2 2 0 1138.8068 4392.2563 S2005s S2007s TMT10 1985 (K) NGGSSPESDVGTDNKLTPPEsQsPLHWLADLAEQK (A) NGGS(0.0)S(0.0)PES(0.0)DVGT(0.0)DNKLT(0.0)PPES(0.99)QS(0.99)PLHWLADLAEQK K:TMT10,s:Phosphorylated S JMJD1C 286573.8 3 22 377.1 336.35 HUMAN 1 2.0544 6.1379 LTPPQGNSPHSNERK-p Q8TF72;S582-p LTPPQGNSPHSNERK 0.387041482456231 0.0796891161681751 -0.292 0.239 7.62767921469866 14.5785795506541 -0.292 0.239 0.172676039267738 0.0348451264546596 -1.570498030282 2.79801748967421 Q8TF72 SHROOM3 Q8TF72.S582.p_SHROOM3 Q8TF72_T576tS582s_2_2_576_582 Q8TF72 Q8TF72 Protein Shroom3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4020.4020.5 11.78 11.78 5.945 3 2 2 0 515.4575 2413.3213 T576t S582s TMT10 573 (K) RHLtPPQGNsPHSNERK (S) RHLT(0.99)PPQGNS(0.99)PHS(0.0)NERK K:TMT10,t:Phosphorylated T,s:Phosphorylated S SHROOM3 218451.1 1 54 90.2 622.62 HUMAN 1 -7.6277 14.5786 LTPQRERSGSESSVD-p Q9UQ35;S1517-p LTPQRERSGSESSVD 0.0608497647854506 0.0163874143946875 0.508666666666667 0.733666666666667 26.6049971979526 24.6578116037093 0.508666666666667 0.733666666666667 0.00218524572956302 0.00342151808307242 5.46209925255109 4.95155959563639 Q9UQ35 SRRM2 Q9UQ35.S1517.p_SRRM2 Q9UQ35_S1517s _1_1_1517_1517 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6542.6542.3 10.04 10.55 1.103 4 1 1 0 521.256 1481.7848 S1517s TMT10 1517 (R) sGSESSVDQK (T) S(0.99)GS(0.0)ES(0.0)S(0.0)VDQK K:TMT10,s:Phosphorylated S SRRM2 300351.7 1 97 2.1 3310.34 HUMAN 1 26.605 24.6578 LTPRAPGSPRGQHEP-p Q9H6F5;S188-p LTPRAPGSPRGQHEP 0.751582909480633 0.760626072441349 0.132666666666667 -0.126333333333333 2.36469105413711 1.6420689936037 0.132666666666667 -0.126333333333333 0.58013744053203 0.685161735319531 0.588132113994169 -0.427944438644518 Q9H6F5 CCDC86 Q9H6F5.S188.p_CCDC86 Q9H6F5_S188s _1_1_188_188 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11311.11516.5 20.58 20.58 1.717 4 1 1 0 697.17 3401.8533 S188s TMT10 185 (R) APGsPRGQHEPSKPPPAGETVTGGFGAK (K) APGS(0.99)PRGQHEPS(0.0)KPPPAGET(0.0)VT(0.0)GGFGAK K:TMT10,s:Phosphorylated S CCDC86 40349 6 13 346.1 352.36 HUMAN 1 2.3647 -1.6421 LTPRPPGSPRPPPPV-p Q9H6K5;S32-p LTPRPPGSPRPPPPV 0.82619699417303 0.722285348863371 -0.0316666666666667 -0.0373333333333333 1.60113236609144 1.94524919335993 -0.0316666666666667 -0.0373333333333333 0.691650608551335 0.638962073360884 -0.418538894200133 -0.496585570753467 Q9H6K5 PRR36 Q9H6K5.S32.p_PRR36 Q9H6K5_S32s _1_1_32_32 Q9H6K5 Q9H6K5|Q9H6K5-2 Proline-rich protein 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19675.19675.4 14.02 14.02 1.102 3 1 1 0 706.151 2741.614 S32s TMT10 21 (R) APGLLTPRPPGsPRPPPPVTPAALR (V) APGLLT(0.0)PRPPGS(0.99)PRPPPPVT(0.0)PAALR s:Phosphorylated S PRR36 133030.9 2 1 1580.1 130 HUMAN 1 -1.6011 -1.9452 LTPSGDVSPVKPLSR-p Q8WYQ5;S377-p LTPSGDVSPVKPLSR 0.524205286941981 0.277640657998669 -0.0876666666666667 -0.116666666666667 5.18899052437943 7.33241236959902 -0.0876666666666667 -0.116666666666667 0.302761708669886 0.18482416935148 -1.13858151678331 -1.51864416505091 Q8WYQ5 DGCR8 Q8WYQ5.S377.p_DGCR8 Q8WYQ5_S377s _1_1_377_377 Q8WYQ5 Q8WYQ5|Q8WYQ5-3 Microprocessor complex subunit DGCR8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13355.13355.5 20.34 15.24 2.91 6 1 1 0 754.5879 3688.9419 S377s TMT10 358 (K) MKDNEEREQSSDLTPSGDVsPVKPLSR (S) MKDNEEREQS(0.0)S(0.0)DLT(0.0)PS(0.0)GDVS(0.99)PVKPLS(0.0)R K:TMT10,s:Phosphorylated S DGCR8 86842.3 14 6 1117.1 175.44 HUMAN 1 -5.189 -7.3324 LTPSNFPSPNQSSRA-p Q8IZL2;S1089-p LTPSNFPSPNQSSRA 0.339248856969376 0.0356646348786854 0.147 0.316 8.73325771698287 19.4888600811634 0.147 0.316 0.133867214990038 0.0112490019453809 1.76218946185161 3.76669253730452 Q8IZL2 MAML2 Q8IZL2.S1089.p_MAML2 Q8IZL2_S1089s _1_1_1089_1089 Q8IZL2 Q8IZL2 Mastermind-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19288.19288.3 15.62 15.62 1.562 7 1 1 0 879.0921 2555.3051 S1089s TMT10 1074 (R) TGINQPPSLTPSNFPsPNQSSR (A) T(0.0)GINQPPS(0.0)LT(0.0)PS(0.0)NFPS(0.99)PNQS(0.0)S(0.0)R s:Phosphorylated S MAML2 125479.7 1 2 5311.1 20.72 HUMAN 1 8.7333 19.4889 LTPSYTWTPLKTEVD-p Q15398;T344-p LTPSYTWTPLKTEVD 0.898522472312718 0.00394596778865653 -0.034 -0.853333333333333 0.910600978407819 35.4453238956321 -0.034 -0.853333333333333 0.810848844508753 0.000285408964862668 -0.25130080157119 -8.25960598767146 Q15398 DLGAP5 Q15398.T344.p_DLGAP5 Q15398_T344t _1_1_344_344 Q15398 Q15398-1|Q15398-3 Disks large-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28639.28639.4 24.23 21.81 1.106 9 1 1 0 913.9756 3572.9091 T344t TMT10 332 (R) SANAFLTPSYTWtPLKTEVDESQATK (E) S(0.0)ANAFLT(0.0)PS(0.0)Y(0.0)T(0.0)WT(0.99)PLKT(0.0)EVDES(0.0)QAT(0.0)K K:TMT10,t:Phosphorylated T DLGAP5 95797.9 2 3 355.1 348.78 HUMAN 1 -0.9106 -35.4453 LTQDRPGSPSGSEDK-p Q96FS4;S884-p LTQDRPGSPSGSEDK 0.112241107364691 0.0316359987498557 -0.510666666666667 -0.270333333333333 19.8387112064886 20.2585129068679 -0.510666666666667 -0.270333333333333 0.0103783635394995 0.00942212169671478 -3.84442124241618 -3.93091181485103 Q96FS4 SIPA1 Q96FS4.S884.p_SIPA1 Q96FS4_S884s _1_1_884_884 Q96FS4 Q96FS4|F6RY50 Signal-induced proliferation-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15627.15627.4 17.59 13.2 1.105 8 1 1 0 1004.2434 3933.983 S884s TMT10 866 (K) PSVPSADSETPLTQDRPGsPSGSEDKGNPAPELR (A) PS(0.0)VPS(0.0)ADS(0.0)ET(0.0)PLT(0.0)QDRPGS(0.99)PS(0.0)GS(0.0)EDKGNPAPELR K:TMT10,s:Phosphorylated S SIPA1 112888.8 5 3 2188.1 94.04 HUMAN 1 -19.8387 -20.2585 LTQESRKTPEVVQST-p O75376-2;T1383-p LTQESRKTPEVVQST 0.537243068570589 0.0803724744989215 -0.0866666666666667 0.202333333333333 4.98799926341288 14.5282895335946 -0.0866666666666667 0.202333333333333 0.317102797677148 0.035250967944739 -1.10185843904414 2.78869076488283 O75376 NCOR1 O75376.2.T1383.p_NCOR1 O75376-2_T1383t_1_1_1383_1383 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21222.21222.5 9.19 9.19 0 8 1 1 0 899.8904 4414.4549 T1383t N1409n Hydrogen 1382 (R) KtPEVVQSTRPIIEGSISQGTPIKFDNnSGQSAIK (H) KT(0.99)PEVVQS(0.0)T(0.0)RPIIEGS(0.0)IS(0.0)QGT(0.0)PIKFDN(0.50)N(0.50)S(0.0)GQS(0.0)AIK K:TMT10-Lys-Only,t:Phosphorylated T,n:Deamidated NCOR1 259453.1 1 13 35.1 889.74 HUMAN 1 -4.988 14.5283 LTQLLLNSDHRSTAT-p Q5SWX8;S264-p LTQLLLNSDHRSTAT 0.306735184126758 0.209201770652261 0.148333333333333 0.149333333333333 9.60002717256617 8.93799440113285 0.148333333333333 0.149333333333333 0.109647133581353 0.127702841230487 1.91229728714042 1.7969877336402 Q5SWX8 C1orf27 Q5SWX8.S264.p_C1orf27 Q5SWX8_S264s _1_1_264_264 Q5SWX8 Q5SWX8|Q5SWX8-4|Q5SWX8-3 Protein odr-4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23934.23934.3 15.86 15.86 7.654 2 1 1 0 573.3129 1637.9536 S264s TMT10 256 (R) VLTQLLLNsDHR (S) VLT(0.0)QLLLNS(0.99)DHR s:Phosphorylated S ODR4 51729.8 1 1 4425.1 31.59 HUMAN 1 9.6 8.938 LTQRGLKTVFDEAIR-p P63000-2;T186-p LTQRGLKTVFDEAIR 0.192287872331474 0.00885809255924247 0.207666666666667 0.458 13.9743393952304 29.0839228102151 0.207666666666667 0.458 0.0400466378586479 0.00123483155507163 2.68820836234419 6.14881856806324 P63000 RAC1 P63000.2.T186.p_RAC1 P63000-2_T186t _1_1_186_186 P63000-2 P63000-2|P15153|P60763|B1AH80|B1AH77 Isoform B of Ras-related C3 botulinum toxin substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27371.27371.3 12.99 12.99 99 1 1 1 0 596.3342 1707.0205 T186t TMT10 183 (R) GLKtVFDEAIR (A) GLKT(1.0)VFDEAIR K:TMT10,t:Phosphorylated T RAC1 23866.3 1 2 4835.1 26.09 HUMAN 1 13.9743 29.0839 LTQSAPASPTNKGVH-p Q8N122;S863-p LTQSAPASPTNKGVH 0.153998790819573 0.0847774187878305 -0.262 -0.197 16.3288256712161 14.1870214953845 -0.262 -0.197 0.0232872085678516 0.0381327257894678 -3.13158559343076 -2.72565939652993 Q8N122 RPTOR Q8N122.S863.p_RPTOR Q8N122_S863s _1_1_863_863 Q8N122 Q8N122|Q8N122-3 Regulatory-associated protein of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19182.19182.2 17.56 17.56 1.475 7 1 1 0 1178.1124 2275.2546 S863s TMT10 850 (R) VLDTSSLTQSAPAsPTNK (G) VLDT(0.0)S(0.0)S(0.0)LT(0.0)QS(0.0)APAS(0.99)PT(0.0)NK K:TMT10,s:Phosphorylated S RPTOR 150746.6 5 6 1778.1 115.46 HUMAN 1 -16.3288 -14.187 LTQYHGGSLPNVSQL-p Q6UUV7;S62-p LTQYHGGSLPNVSQL 0.839353804661943 0.909261012812205 0.034 0.0163333333333333 1.47032443181842 0.578026163125343 0.034 0.0163333333333334 0.712799779722406 0.875381539381321 0.388021447053364 0.164386329602545 Q6UUV7 CRTC3 Q6UUV7.S62.p_CRTC3 Q6UUV7_S62s _1_1_62_62 Q6UUV7 Q6UUV7|Q6UUV7-3|H0YK33 CREB-regulated transcription coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18763.18763.3 23.87 23.87 7.389 4 1 1 0 693.692 1999.0922 S62s TMT10 55 (R) LTQYHGGsLPNVSQLR (S) LT(0.0)QY(0.0)HGGS(0.99)LPNVS(0.0)QLR s:Phosphorylated S CRTC3 67129.2 3 1 1297.1 156.77 HUMAN 1 1.4703 0.578 LTRIGVMSLIRKKVQ-p F5GWX5;S1493-p LTRIGVMSLIRKKVQ 0.499995341482022 0.0549860420517755 0.0916666666666667 -0.249 5.5484881847638 16.7849295010347 0.0916666666666667 -0.249 0.278709120942625 0.0209655881342697 1.20368974470367 -3.21798061961438 F5GWX5 CHD4 F5GWX5.S1493.p_CHD4 F5GWX5_S1493s _1_1_1493_1493 F5GWX5 Q14839|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27948.27948.2 7.43 6.74 99 1 1 1 0 599.3354 1117.6965 S1493s TMT10 1489 (R) IGVMsLIR (K) IGVMS(1.0)LIR s:Phosphorylated S CHD4 218583 1 17 49.1 753.68 HUMAN 1 5.5485 -16.7849 LTRKHSVSPPPPYPG-p Q9BZD6;S202-p LTRKHSVSPPPPYPG 0.746920700156285 0.124471316109268 -0.0573333333333333 -0.159333333333333 2.40555021085919 11.9371822491032 -0.0573333333333334 -0.159333333333333 0.574705004435331 0.0640150037237641 -0.5968521299531 -2.32004693492214 Q9BZD6 PRRG4 Q9BZD6.S202.p_PRRG4 Q9BZD6_S202s _1_1_202_202 Q9BZD6 Q9BZD6 Transmembrane gamma-carboxyglutamic acid protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7579.7579.4 17.77 17.77 1.176 4 1 1 0 510.5196 1959.0853 S202s TMT10 199 (K) HSVsPPPPYPGHTK (G) HS(0.0)VS(0.99)PPPPY(0.0)PGHT(0.0)K K:TMT10,s:Phosphorylated S PRRG4 25745 3 3 3095.1 60.78 HUMAN 1 -2.4056 -11.9372 LTRPRSSSQIPEGFG-p Q9Y4E6;S1154-p LTRPRSSSQIPEGFG 0.920354484804061 0.686359374281581 0.0233333333333333 -0.04 0.704426840714274 2.23705494614807 0.0233333333333333 -0.04 0.850270900117334 0.597440287672128 0.198000030936481 -0.560614276469195 Q9Y4E6 WDR7 Q9Y4E6.S1154.p_WDR7 Q9Y4E6_S1154s _1_1_1154_1154 Q9Y4E6 Q9Y4E6|Q9Y4E6-2|A2RRE0 WD repeat-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23076.23076.2 10.66 7.55 1.138 8 1 1 0 1262.6021 2444.2255 S1154s TMT10 1152 (R) SSsQIPEGFGLTSGGSNYSLAR (H) S(0.0)S(0.0)S(0.99)QIPEGFGLT(0.0)S(0.0)GGS(0.0)NY(0.0)S(0.0)LAR s:Phosphorylated S WDR7 166260.7 5 3 2376.1 86.1 HUMAN 1 0.7044 -2.2371 LTRPTPRSPANWSSP-p E3W994;S880-p LTRPTPRSPANWSSP 0.318436709095685 0.204872888427108 0.459333333333333 0.132 9.3036388758849 9.05881086751245 0.459333333333333 0.132 0.117391354156688 0.124199232831898 1.86093790336712 1.81788533294834 E3W994 NotFound E3W994.S880.p_NotFound E3W994_S880s_1_1_880_880 E3W994 J3KR49|E3W994 CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30277.30277.4 15.97 15.97 1.43 17 1 1 0 1177.5143 4625.0533 S880s N893n N897n Hydrogen 880 (R) sPANWSSPLTSPTnTSQnTLSPSAFDYDTENMNSEDIYSSLR (G) S(0.99)PAN(0.0)WS(0.0)S(0.0)PLT(0.0)S(0.0)PT(0.0)N(0.99)T(0.0)S(0.0)QN(0.99)T(0.0)LS(0.0)PS(0.0)AFDY(0.0)DT(0.0)EN(0.0)MN(0.0)S(0.0)EDIY(0.0)S(0.0)S(0.0)LR s:Phosphorylated S,n:Deamidated CLASP2 139660.6 2 21 158.1 498.15 HUMAN 1 9.3036 9.0588 LTRTNRTSPNNARKQ-p Q9Y232-2;S75-p LTRTNRTSPNNARKQ 0.0365636657986741 0.899517938561437 0.655 0.0196666666666667 32.9399371778753 0.643942168962657 0.655 0.0196666666666667 0.000508166793307138 0.862195562068626 7.37893148114721 0.181997452003528 Q9Y232 CDYL Q9Y232.2.S75.p_CDYL Q9Y232-2_S75s _1_1_75_75 Q9Y232-2 Q9Y232|Q9Y232-2 Isoform 2 of Chromodomain Y-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.2962.2962.3 8.16 8.16 1.405 3 1 1 0 480.5705 1359.729 S75s TMT10 71 (R) TNRTsPNNAR (K) T(0.0)NRT(0.0)S(0.99)PNNAR s:Phosphorylated S CDYL 61121.6 3 3 1110.1 176.05 HUMAN 1 32.9399 0.6439 LTSASLGSADENSVA-p P49815-4;S1002-p LTSASLGSADENSVA 0.61032564826804 0.378296539948593 -0.0803333333333333 0.106666666666667 3.97258926317069 5.60809344451872 -0.0803333333333333 0.106666666666667 0.400627792169954 0.274910074517555 -0.911886395821502 1.21414836064467 P49815 TSC2 P49815.4.S1002.p_TSC2 P49815-4_S1002s _1_1_1002_1002 P49815-4 P49815|P49815-4|P49815-2|P49815-3|H3BMQ0|P49815-5 Isoform 4 of Tuberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23734.23734.3 18.76 18.76 1.138 8 1 1 0 1049.5309 3066.5843 S1002s TMT10 991 (R) IQTSLTSASLGsADENSVAQADDSLK (N) IQT(0.0)S(0.0)LT(0.0)S(0.0)AS(0.0)LGS(0.99)ADENS(0.0)VAQADDS(0.0)LK K:TMT10,s:Phosphorylated S TSC2 200147.7 3 8 214.1 435.34 HUMAN 1 -3.9726 5.6081 LTSEPMGSPVSSKTE-p Q8WWM7-3;S594-p LTSEPMGSPVSSKTE 0.252409750747624 0.424954079038645 -0.284333333333333 -0.0873333333333333 11.4027345709788 4.94619154177821 -0.284333333333333 -0.0873333333333333 0.0723979956583691 0.320170154684574 -2.2268216009059 -1.09396903545538 Q8WWM7 ATXN2L Q8WWM7.3.S594.p_ATXN2L Q8WWM7-3_S594s _1_1_594_594 Q8WWM7-3 Q8WWM7-3|H3BUF6|Q8WWM7-2|Q8WWM7-9|Q8WWM7-4|Q8WWM7-5|Q8WWM7-8|Q8WWM7-6 Isoform 3 of Ataxin-2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20529.20529.3 22.24 22.24 2.665 5 1 1 0 953.1683 2777.521 S594s TMT10 580 (K) EKEVDGLLTSEPMGsPVSSK (T) EKEVDGLLT(0.0)S(0.0)EPMGS(0.99)PVS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ATXN2L 116093.7 24 20 184.1 476.17 HUMAN 1 -11.4027 -4.9462 LTSNVADSPRNKKEK-p Q15629;S365-p LTSNVADSPRNKKEK 0.310241942410331 0.00430383606637292 -0.155 -0.632 9.50239916480039 34.7783426711311 -0.155 -0.632 0.11213987909428 0.000332786525087223 -1.89537406627612 -8.01296903079126 Q15629 TRAM1 Q15629.S365.p_TRAM1 Q15629_S365s _1_1_365_365 Q15629 Q15629|Q15629-2|G3XAN4 Translocating chain-associated membrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11080.11080.3 22.88 22.88 3.484 5 1 1 0 733.3474 2118.0625 S365s TMT10 349 (K) GTENGVNGTLTSNVADsPR (N) GT(0.0)ENGVNGT(0.0)LT(0.0)S(0.0)NVADS(0.99)PR s:Phosphorylated S TRAM1 43241.9 44 2 1714.1 119.83 HUMAN 1 -9.5024 -34.7783 LTSPHPPTPPPPPRR-p O14512;T307-p LTSPHPPTPPPPPRR 0.33403153942184 0.0416317569082692 0.410333333333333 -0.317666666666667 8.88893239150211 18.5068655352378 0.410333333333333 -0.317666666666667 0.129153672782446 0.0141030630169092 1.78913661654573 -3.56256072624228 O14512 SOCS7 O14512.T307.p_SOCS7 O14512_T307t _1_1_307_307 O14512 O14512|A0A087X1Q5|O14512-2 Suppressor of cytokine signaling 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9385.9385.4 10.97 10.97 6.635 3 1 1 0 504.0222 1933.0969 T307t TMT10 299 (R) GLTSPHPPtPPPPPRR (S) GLT(0.0)S(0.0)PHPPT(0.99)PPPPPRR t:Phosphorylated T SOCS7 63709.4 1 1 6552.1 10.97 HUMAN 1 8.8889 -18.5069 LTSPLPMTPILEGSH-p Q8IZ21;T432-p LTSPLPMTPILEGSH 0.805134921082359 0.699794059659016 -0.036 0.038 1.81419672898697 2.1315339565991 -0.036 0.038 0.658537221715058 0.612134143741848 -0.467249753548634 0.537674114792455 Q8IZ21 PHACTR4 Q8IZ21.T432.p_PHACTR4 Q8IZ21_T432t _1_1_432_432 Q8IZ21 Q8IZ21-2|Q8IZ21-3 Phosphatase and actin regulator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27915.27915.3 20.22 20.22 4.032 4 1 1 0 833.4394 2418.3376 T432t TMT10 421 (R) IQQALTSPLPMtPILEGSHR (A) IQQALT(0.0)S(0.0)PLPMT(0.99)PILEGS(0.0)HR t:Phosphorylated T PHACTR4 78438 2 10 350.1 351.04 HUMAN 1 -1.8142 2.1315 LTTEATQTPVSNKKP-p Q9BXS6;T349-p LTTEATQTPVSNKKP 0.275757791818365 0.101682472348772 -0.178 -0.348333333333333 10.5829007620055 13.1128379130991 -0.178 -0.348333333333333 0.0874399546703228 0.0488333151985031 -2.08318770698589 -2.53001717809555 Q9BXS6 NUSAP1 Q9BXS6.T349.p_NUSAP1 Q9BXS6_T349tS352s_2_2_349_352 Q9BXS6 Q9BXS6|Q9BXS6-2|Q9BXS6-5|Q9BXS6-3|Q9BXS6-6|Q9BXS6-4 Nucleolar and spindle-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23081.23081.4 7.44 7.44 7.437 5 2 2 0 824.205 3133.8643 T349t S352s TMT10 342 (K) LTTEATQtPVsNKKPVFDLK (A) LT(0.0)T(0.0)EAT(0.0)QT(0.99)PVS(0.99)NKKPVFDLK K:TMT10,t:Phosphorylated T,s:Phosphorylated S NUSAP1 49622.1 3 12 1571.1 130.66 HUMAN 1 -10.5829 -13.1128 LTTGTPASPRRPPAL-p Q99501;S394-p LTTGTPASPRRPPAL 0.97890490108253 0.120680138691691 0.004 -0.206 0.182805519923902 12.1096380809882 0.004 -0.206 0.958781063803128 0.0615228140568987 0.0541205797737429 -2.35061103698464 Q99501 GAS2L1 Q99501.S394.p_GAS2L1 Q99501_S394s _1_1_394_394 Q99501 Q99501|A0A5E8 GAS2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9128.9128.2 12.01 7.56 1.899 4 1 1 0 655.3391 1229.7051 S394s TMT10 387 (R) LTTGTPAsPR (R) LT(0.0)T(0.0)GT(0.0)PAS(0.99)PR s:Phosphorylated S GAS2L1 73400.1 4 7 1084.1 179.86 HUMAN 1 0.1828 -12.1096 LTTTGNSSLNSTSNT-p Q96KR1;S476-p LTTTGNSSLNSTSNT 0.34756541026006 0.671298933704412 0.150666666666667 0.051 8.52894718223429 2.36634232450964 0.150666666666667 0.051 0.140315381623325 0.579916903151866 1.72681886841875 0.588411979649923 Q96KR1 ZFR Q96KR1.S476.p_ZFR Q96KR1_S476s _1_1_476_476 Q96KR1 Q96KR1 Zinc finger RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11451.11451.3 12.76 12.76 1.249 9 1 1 0 741.043 2141.145 S476s TMT10 468 (K) GLTTTGNSsLNSTSNTK (V) GLT(0.0)T(0.0)T(0.0)GNS(0.0)S(0.99)LNS(0.0)T(0.0)S(0.0)NT(0.0)K K:TMT10,s:Phosphorylated S ZFR 118151.1 1 2 1692.1 120.73 HUMAN 1 8.5289 2.3663 LTTVNGQSPPEHSAP-p Q6PKG0;S143-p LTTVNGQSPPEHSAP 0.349558534182846 0.00328132424303653 -0.164666666666667 -0.645333333333333 8.47909192012357 37.1874430545372 -0.164666666666667 -0.645333333333333 0.141935426787459 0.000191097803188906 -1.71818613750424 -8.93548220648152 Q6PKG0 LARP1 Q6PKG0.S143.p_LARP1 Q6PKG0_S143s_1_1_143_143 Q6PKG0 Q6PKG0 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20071.20790.4 23.83 24.28 1.625 4 1 1 0 716.8808 2783.5456 N140n S143s TMT10 130 (K) NALPPVLTTVnGQsPPEHSAPAK (V) N(0.0)ALPPVLT(0.0)T(0.0)VN(0.99)GQS(0.99)PPEHS(0.0)APAK K:TMT10,n:Deamidated,s:Phosphorylated S LARP1 123907.4 6 34 28.1 931.95 HUMAN 1 -8.4791 -37.1874 LTVCQEGTLKRKTSS-p P42356;T250-p LTVCQEGTLKRKTSS 0.628095400623206 0.258008625496504 -0.0763333333333334 0.139666666666667 3.75129934743228 7.7526758685017 -0.0763333333333334 0.139666666666667 0.421570356693255 0.167776995590661 -0.86928137042759 1.59173676655185 P42356 NotFound P42356.T250.p_NotFound P42356_T250t _1_1_250_250 P42356 P42356 Phosphatidylinositol 4-kinase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30217.30217.3 18.7 15.43 2.194 4 1 1 0 804.4397 2331.3358 T250t TMT10 236 (R) SILPSNLLTVCQEGtLK (R) S(0.0)ILPS(0.0)NLLT(0.0)VCQEGT(0.99)LK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T PI4KA 239393.6 1 5 1109.1 176.13 HUMAN 1 -3.7513 7.7527 LTVERDESSSKKSHT-p O15344;S511-p LTVERDESSSKKSHT 0.764959872644369 0.0264534344281198 -0.0523333333333334 0.293666666666667 2.23409425065554 21.4168093725456 -0.0523333333333334 0.293666666666667 0.597847716711324 0.00721637449233533 -0.560041688809864 4.18555177051689 O15344 MID1 O15344.S511.p_MID1 O15344_S511s _1_1_511_511 O15344 O15344|O15344-2 E3 ubiquitin-protein ligase Midline-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6999.6999.4 14.08 14.08 1.137 5 1 1 0 675.3567 2618.4353 S511s TMT10 499 (K) VSHDNLTVERDEsSSKK (S) VS(0.0)HDNLT(0.0)VERDES(0.99)S(0.0)S(0.0)KK K:TMT10,s:Phosphorylated S MID1 76961 6 6 2821.1 69.37 HUMAN 1 -2.2341 21.4168 LTVEVRGSNGAFYKG-p P51114-2;S11-p LTVEVRGSNGAFYKG 0.814231941121425 0.548228560115613 0.0346666666666667 -0.0683333333333333 1.71494345134079 3.51094035516118 0.0346666666666667 -0.0683333333333333 0.673760668323097 0.445559763223514 0.444706087069886 -0.822282333473752 P51114 FXR1 P51114.2.S11.p_FXR1 P51114-2_S11s _1_1_11_11 P51114-2 P51114|P51114-2|E9PFF5|C9JYQ6 Isoform 2 of Fragile X mental retardation syndrome-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22492.22492.2 11.28 11.28 2.171 3 1 1 0 1046.5226 2012.065 S11s Acetyl 2 (M) AELTVEVRGsNGAFYK (G) AELT(0.0)VEVRGS(0.99)NGAFY(0.0)K K:TMT10,s:Phosphorylated S FXR1 61190.3 2 7 553.2 273.48 HUMAN 1 1.7149 -3.5109 LTVLKTVSLLDENNV-p P78527;S3305-p LTVLKTVSLLDENNV 0.875267863646254 0.0302980075022781 -0.0253333333333333 0.298666666666667 1.13297494323874 20.5372000281882 -0.0253333333333333 0.298666666666667 0.77037557639171 0.00883649420909105 -0.306909050630567 3.99133598072901 P78527 PRKDC P78527.S3305.p_PRKDC P78527_S3305s _1_1_3305_3305 P78527 P78527|P78527-2 DNA-dependent protein kinase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28599.28599.3 18.79 18.79 1.106 6 1 1 0 769.7343 2227.2222 S3305s TMT10 3303 (K) TVsLLDENNVSSYLSK (N) T(0.0)VS(0.99)LLDENNVS(0.0)S(0.0)Y(0.0)LS(0.0)K K:TMT10,s:Phosphorylated S PRKDC 474044.1 1 15 362.1 342.68 HUMAN 1 -1.133 20.5372 LTVLSIYTCLGVDIE-p Q13508;T205-p LTVLSIYTCLGVDIE 0.777407768950177 0.305560682622488 -0.0566666666666667 0.150666666666667 2.1001814262447 6.80159289482667 -0.0566666666666667 0.150666666666667 0.616569244182356 0.208852996437294 -0.530875382371135 1.42585362397381 Q13508 ART3 Q13508.T205.p_ART3 Q13508_T205t _1_1_205_205 Q13508 Q13508|Q13508-3|Q13508-2 Ecto-ADP-ribosyltransferase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19706.19706.4 7.45 3.5 1.255 4 1 1 0 894.7032 3495.8445 T205t TMT10 191 (K) PQAANDQLTVLSIYtCLGVDIENFLDK (E) PQAANDQLT(0.0)VLS(0.0)IY(0.0)T(0.99)CLGVDIENFLDK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ART3 44264.8 1 1 7152.1 7.45 HUMAN 1 -2.1002 6.8016 LTVNKRSSPPSAGNS-p P57682;S71-p LTVNKRSSPPSAGNS 0.140093583247936 0.666782257651587 0.271666666666667 0.0666666666666667 17.4666780855076 2.40886231471545 0.271666666666667 0.0666666666666667 0.0179197601075297 0.574266878442699 3.35512389279617 0.597482701011065 P57682 KLF3 P57682.S71.p_KLF3 P57682_S71s _1_1_71_71 P57682 P57682|P57682-2 Krueppel-like factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10541.10541.2 13.6 6.83 1.121 6 1 1 0 927.4727 1773.9747 S71s TMT10 70 (R) SsPPSAGNSPSSLK (F) S(0.0)S(0.99)PPS(0.0)AGNS(0.0)PS(0.0)S(0.0)LK K:TMT10,s:Phosphorylated S KLF3 39170.3 2 23 394.2 330.8 HUMAN 1 17.4667 2.4089 LTVSDGESGEEKKTK-p P46100;S1352-p LTVSDGESGEEKKTK 0.213229385106179 0.869970510361191 0.286 -0.0273333333333333 12.9432253026665 0.853775301410937 0.286 -0.0273333333333333 0.050778219632985 0.821528188880344 2.50084144244281 -0.236763413097726 P46100 ATRX P46100.S1352.p_ATRX P46100_S1352s _1_1_1352_1352 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7860.7860.5 10.82 10.82 1.76 3 1 1 0 528.8958 2560.4752 S1352s TMT10 1343 (R) HKLTVSDGEsGEEKK (T) HKLT(0.0)VS(0.0)DGES(0.99)GEEKK K:TMT10,s:Phosphorylated S ATRX 285034.2 1 37 18.1 1035.36 HUMAN 1 12.9432 -0.8538 LTVTRCNSLCGTKPQ-p P18583-3;S2247-p LTVTRCNSLCGTKPQ 0.207892104417555 0.587148742010306 0.324333333333333 -0.0523333333333333 13.1608429199981 3.12654626927959 0.324333333333333 -0.0523333333333333 0.0482965054495345 0.486794175301899 2.54009075929829 -0.745892880784509 P18583 SON P18583.3.S2247.p_SON P18583-3_S2247s _1_1_2247_2247 P18583-3 P18583-3 Isoform B of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8618.8618.3 11.99 11.99 2.154 3 1 1 0 759.3845 2196.172 S2247s TMT10 2245 (R) CNsLCGTKPQSEK (H) CNS(0.99)LCGT(0.0)KPQS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SON 250783.7 1 1 45.2 778.56 HUMAN 1 13.1608 -3.1265 LTWERVRSQVDHVIW-p O43865;S421-p LTWERVRSQVDHVIW 0.158166667112897 0.23444264087742 -0.296333333333333 -0.230333333333333 16.0683375699178 8.29544718104034 -0.296333333333333 -0.230333333333333 0.0247267047413097 0.148065978796672 -3.08132282619337 -1.6858225533365 O43865 AHCYL1 O43865.S421.p_AHCYL1 O43865_S421s _1_1_421_421 O43865 Q96HN2-2|O43865|Q96HN2-3|Q96HN2-4|O43865-2 S-adenosylhomocysteine hydrolase-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17051.17051.3 16.89 16.89 99 1 1 1 0 725.3881 2094.186 S421s TMT10 419 (R) VRsQVDHVIWPDGK (R) VRS(1.0)QVDHVIWPDGK K:TMT10,s:Phosphorylated S AHCYL1 60034.4 1 5 2179.1 94.4 HUMAN 1 -16.0683 -8.2954 LTWHSYPSEDDDKKD-p P83916;S175-p LTWHSYPSEDDDKKD 0.872612565846677 0.0769879342557758 0.0236666666666667 0.216 1.15891872935873 14.7740498667029 0.0236666666666667 0.216 0.765787242580993 0.0333115632135046 0.313279827423243 2.83436502008853 P83916 CBX1 P83916.S175.p_CBX1 P83916_S175s _1_1_175_175 P83916 P83916 Chromobox protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13357.13357.4 17.62 16 3.248 4 1 1 0 798.1538 3109.6248 S175s TMT10 168 (R) LTWHSYPsEDDDKKDDKN (-) LT(0.0)WHS(0.0)Y(0.0)PS(0.99)EDDDKKDDKN K:TMT10,s:Phosphorylated S CBX1 21531.5 2 5 1104.1 177.13 HUMAN 1 1.1589 14.774 LTYRRRLSYNTASNK-p P49207;S12-p LTYRRRLSYNTASNK 0.717179227515211 0.00313960863177787 0.115333333333333 0.973 2.72412233891315 37.579367516095 0.115333333333333 0.973 0.534057189717393 0.000174607642389746 0.663798934158766 9.09412097620454 P49207 RPL34 P49207.S12.p_RPL34 P49207_S12s _1_1_12_12 P49207 P49207 60S ribosomal protein L34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5084.5084.2 13.43 13.43 3.081 4 1 1 0 731.8674 1382.7589 S12s Hydrogen 10 (R) RLsYNTASNK (T) RLS(0.99)Y(0.0)NT(0.0)AS(0.0)NK K:TMT10-Lys-Only,s:Phosphorylated S RPL34 13520.9 4 1 4190.1 35.62 HUMAN 1 2.7241 37.5794 LVAEAFVSQIAAAEP-p O75431;S10-p LVAEAFVSQIAAAEP 0.499391048098388 0.15347901086926 0.236666666666667 0.237 5.5582813669989 10.7037815317529 0.236666666666667 0.237 0.278081350102057 0.0850397249454132 1.2054538939963 2.10337266510856 O75431 MTX2 O75431.S10.p_MTX2 O75431_S10s _1_1_10_10 O75431 O75431|F8WE26 Metaxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.37825.37825.3 19.02 19.02 4.168 4 1 1 0 1142.578 3345.7568 S10s Acetyl 2 (M) SLVAEAFVsQIAAAEPWPENATLYQQLK (G) S(0.0)LVAEAFVS(0.99)QIAAAEPWPENAT(0.0)LY(0.0)QQLK K:TMT10,s:Phosphorylated S MTX2 30105 2 2 5249.1 21.34 HUMAN 1 5.5583 10.7038 LVAENSRSTQRLMLP-p P18858;S388-p LVAENSRSTQRLMLP 0.442299902006713 0.167788200693427 -0.102666666666667 -0.227333333333333 6.52717869563508 10.1969774491653 -0.102666666666667 -0.227333333333333 0.222475468722269 0.095565746168806 -1.37796708019592 -2.01512085099568 P18858 LIG1 P18858.S388.p_LIG1 P18858_S386sS388sT389t_3_3_386_389 P18858 P18858|P18858-3|F5GZ28 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18231.18231.5 8.09 5.85 7.592 6 3 3 0 739.7618 3453.8725 N385n S386s S388s T389t Hydrogen 377 (K) GDVGLVAEnsRstQRLMLPPPPLTASGVFSK (F) GDVGLVAEN(1.0)S(0.99)RS(0.99)T(0.99)QRLMLPPPPLT(0.0)AS(0.0)GVFS(0.0)K K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S,t:Phosphorylated T LIG1 102361.8 1 23 302.1 376.44 HUMAN 1 -6.5272 -10.197 LVAGHEDSNGCINYE-p J3KND3;S136-p LVAGHEDSNGCINYE 0.275195711349952 0.0572289522546229 0.191333333333333 0.274666666666667 10.6067766094942 16.5533799440479 0.191333333333333 0.274666666666667 0.0869605622499808 0.0221137301462472 2.08735425379981 3.17284075320989 J3KND3 NotFound J3KND3.S136.p_NotFound J3KND3_S136s _1_1_136_136 J3KND3 J3KND3|P60660|G3V1Y7 Myosin light polypeptide 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29891.29891.4 23.58 23.58 6.668 3 1 1 0 860.377 3358.5227 S136s TMT10 121 (K) MTEEEVEMLVAGHEDsNGCINYEAFVR (H) MT(0.0)EEEVEMLVAGHEDS(0.99)NGCINY(0.0)EAFVR C:Carbamidomethylation,s:Phosphorylated S MYL6 17229.1 3 4 3315.2 54.12 HUMAN 1 10.6068 16.5534 LVAGIDRYPRKVTAA-p P61353;Y49-p LVAGIDRYPRKVTAA 0.89536917010512 0.112375167123226 -0.0383333333333333 -0.303 0.938718305947747 12.5244311755099 -0.0383333333333333 -0.303 0.805616160335511 0.0559186763199638 -0.258435122255697 -2.42444218413133 P61353 RPL27 P61353.Y49.p_RPL27 P61353_Y49y _1_1_49_49 P61353 P61353 60S ribosomal protein L27 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.15622.15622.4 27.82 24.75 18.757 5 1 1 0 750.1175 2917.4754 Y49y TMT10 28 (K) NIDDGTSDRPYSHALVAGIDRyPR (K) NIDDGT(0.0)S(0.0)DRPY(0.0)S(0.0)HALVAGIDRY(0.99)PR y:Phosphorylated Y RPL27 15797.4 3 1 105.1 27.82 HUMAN 1 -0.9387 -12.5244 LVALDTDSDDDFDMS-p Q8IW50-6;S98-p LVALDTDSDDDFDMS 0.995103621521408 0.227453984781974 -0.000999999999999996 0.128666666666667 0.0423457046515815 8.47143301629657 -0.000999999999999993 0.128666666666667 0.990296922772877 0.142185954696826 -0.0127332117585269 1.71628170677799 Q8IW50 FAM219A Q8IW50.6.S98.p_FAM219A Q8IW50-6_T96tS98s_2_2_96_98 Q8IW50-6 Q8IW50|A0A0A0MRW3|Q8IW50-4|A0A0A0MRW0|Q8IW50-6|Q8IW50-5|A0A0A0MRW2|Q5T586|Q8IW50-2|Q8IW50-3|A0A0A0MRW1 Isoform 6 of Protein FAM219A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.26722.27334.4 17.53 17.53 7.044 7 2 2 0 959.92 3676.7213 T96t S98s TMT10 78 (K) GYSSLDQSPDEKPLVALDtDsDDDFDMSR (Y) GY(0.0)S(0.0)S(0.0)LDQS(0.0)PDEKPLVALDT(0.99)DS(0.99)DDDFDMS(0.0)R K:TMT10,t:Phosphorylated T,s:Phosphorylated S FAM219A 18841.5 4 6 1822.1 112.63 HUMAN 1 -0.0423 8.4714 LVALEQQSPDIAQGV-p P31153;S114-p LVALEQQSPDIAQGV 0.936677542728734 0.229944265307181 0.016 -0.123 0.553028019593014 8.40999862139048 0.016 -0.123 0.880434795801405 0.14421158093051 0.157668226570415 -1.70565053262498 P31153 MAT2A P31153.S114.p_MAT2A P31153_S114s _1_1_114_114 P31153 P31153|P31153-2 S-adenosylmethionine synthase isoform type-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25655.25655.4 16.65 16.38 16.655 2 1 1 0 718.8583 2792.4562 S114s TMT10 103 (K) TCNVLVALEQQsPDIAQGVHLDR (N) T(0.0)CNVLVALEQQS(0.99)PDIAQGVHLDR C:Carbamidomethylation,s:Phosphorylated S MAT2A 44002.2 1 1 3178.1 58.56 HUMAN 1 0.553 -8.41 LVANTARSPQFINLK-p Q92576;S1642-p LVANTARSPQFINLK 0.474995611259053 0.0910289151039883 -0.125 -0.199333333333333 5.9509581082052 13.7682063318872 -0.125 -0.199333333333333 0.254041219686776 0.041993238334001 -1.27582223955457 -2.64890134813445 Q92576 PHF3 Q92576.S1642.p_PHF3 Q92576_S1642s _1_1_1642_1642 Q92576 Q92576|Q92576-2 PHD finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21978.21978.3 9.02 6.32 99 1 1 1 0 495.6138 1404.8615 S1642s TMT10 1642 (R) sPQFINLK (R) S(1.0)PQFINLK K:TMT10,s:Phosphorylated S PHF3 231702.4 10 13 96.1 606.54 HUMAN 1 -5.951 -13.7682 LVASGDDSVDSLLQR-p Q9NR48;S1713-p LVASGDDSVDSLLQR 0.580942837297792 0.237128418830744 0.0926666666666667 -0.181666666666667 4.33956610522773 8.23251844595763 0.0926666666666667 -0.181666666666667 0.368165754495896 0.150227055635292 0.981506540805807 -1.67492683747095 Q9NR48 ASH1L Q9NR48.S1713.p_ASH1L Q9NR48_S1713s _1_1_1713_1713 Q9NR48 Q9NR48|Q9NR48-2 Histone-lysine N-methyltransferase ASH1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23335.23335.3 14.17 14.17 2 3 1 1 0 628.6489 1803.965 S1713s TMT10 1706 (R) LVASGDDsVDSLLQR (M) LVAS(0.0)GDDS(0.99)VDS(0.0)LLQR s:Phosphorylated S ASH1L 336378.7 1 18 245.1 412 HUMAN 1 4.3396 -8.2325 LVASRQVSPLLASQS-p Q9Y4F3;S746-p LVASRQVSPLLASQS 0.536318608089857 0.128911952653925 0.135666666666667 0.262 5.00496143860348 11.7288871137346 0.135666666666667 0.262 0.315866709438736 0.0671600929644991 1.10496724016098 2.28322792980339 Q9Y4F3 KIAA0430 Q9Y4F3.S746.p_KIAA0430 Q9Y4F3_S746s _1_1_746_746 Q9Y4F3 Q9Y4F3|Q9Y4F3-4|Q9Y4F3-3|F8VVB8 Meiosis regulator and mRNA stability factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20706.20706.3 13.82 13.82 6.045 5 1 1 0 618.9818 1774.9649 S746s TMT10 744 (R) QVsPLLASQSWSSR (S) QVS(0.99)PLLAS(0.0)QS(0.0)WS(0.0)S(0.0)R s:Phosphorylated S MARF1 195936.7 1 3 1655.1 123.29 HUMAN 1 5.005 11.7289 LVAVGGFSPNVNHGE-p Q9NXV6;S458-p LVAVGGFSPNVNHGE 0.132882806400642 0.0791878811190425 -0.399666666666667 0.288 18.0806468481195 14.6171205300649 -0.399666666666667 0.288 0.0155573389978824 0.0345372653264333 -3.47860505746359 2.8051720366593 Q9NXV6 CDKN2AIP Q9NXV6.S458.p_CDKN2AIP Q9NXV6_S458s _1_1_458_458 Q9NXV6 Q9NXV6 CDKN2A-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36156.36156.4 25.5 22.57 99 1 1 1 0 768.6704 2991.7032 S458s TMT10 451 (K) LVAVGGFsPNVNHGELLNAAIEALK (A) LVAVGGFS(1.0)PNVNHGELLNAAIEALK K:TMT10,s:Phosphorylated S CDKN2AIP 61580.3 1 9 1573.1 130.52 HUMAN 1 -18.0806 14.6171 LVAYAADSSDEEEEH-p Q7Z7F0;S571-p LVAYAADSSDEEEEH 0.148266672319898 0.0152415612815696 0.242666666666667 -0.370333333333333 16.751364182362 25.1348944569051 0.242666666666667 -0.370333333333333 0.0211282526633436 0.00306556517848541 3.21382295279646 -5.07164810490233 Q7Z7F0 KIAA0907 Q7Z7F0.S571.p_KIAA0907 Q7Z7F0_S571sS572s_2_2_571_572 Q7Z7F0 Q7Z7F0 Protein BLOM7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18872.18872.3 18.82 18.82 6.873 3 2 2 0 975.0923 2763.3262 S571s S572s TMT10 561 (K) GFGLVAYAADssDEEEEHGGHK (N) GFGLVAY(0.0)AADS(0.99)S(0.99)DEEEEHGGHK K:TMT10,s:Phosphorylated S KIAA0907 65072.3 3 4 2285.1 89.64 HUMAN 1 16.7514 -25.1349 LVDDDDISDQEDHRS-p A8MUM1;S347-p LVDDDDISDQEDHRS 0.405156836123993 0.0313655093816315 0.114333333333333 0.313666666666667 7.24520918843025 20.3107201795962 0.114333333333333 0.313666666666667 0.1885728136651 0.00930953484996445 1.50387119949217 3.94219161042875 A8MUM1 TSSC1 A8MUM1.S347.p_TSSC1 A8MUM1_S347s _1_1_347_347 A8MUM1 Q53HC9|A8MUM1 EARP-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28957.28957.4 13.78 13.78 2.374 6 1 1 0 1096.02 4301.092 S347s TMT10 324 (R) VILSNMVSISSEPFGHLVDDDDIsDQEDHRSEEK (S) VILS(0.0)NMVS(0.0)IS(0.0)S(0.0)EPFGHLVDDDDIS(0.99)DQEDHRS(0.0)EEK K:TMT10,s:Phosphorylated S EIPR1 46889.2 2 1 6126.1 13.78 HUMAN 1 7.2452 20.3107 LVDDMADTCGTICHA-p P60891;T225-p LVDDMADTCGTICHA 0.222725896447283 0.592550606244996 0.229666666666667 -0.0826666666666667 12.5472320863676 3.07479981012619 0.229666666666667 -0.0826666666666667 0.055625866780817 0.492629050770165 2.42979160283292 -0.735459749936373 P60891 PRPS1 P60891.T225.p_PRPS1 P60891_T225t _1_1_225_225 P60891 P11908-2|P60891 Ribose-phosphate pyrophosphokinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24688.24688.4 20.42 20.42 2.383 2 1 1 0 704.3406 2734.3614 T225t TMT10 215 (R) VAILVDDMADtCGTICHAADK (L) VAILVDDMADT(0.99)CGT(0.0)ICHAADK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T PRPS1 35347.1 1 4 2695.1 73.72 HUMAN 1 12.5472 -3.0748 LVDKEHDSAEGSHVS-p Q9H9G7;S825-p LVDKEHDSAEGSHVS 0.167474891729899 0.0847774187878305 0.266333333333333 0.361 15.5078146021565 14.1858964056816 0.266333333333333 0.361 0.0281331615310253 0.0381426057894725 2.9742459334724 2.72545233086145 Q9H9G7 AGO3 Q9H9G7.S825.p_AGO3 Q9H9G7_S825sS829sS832s_3_3_825_832 Q9H9G7 Q9H9G7|Q9H9G7-2 Protein argonaute-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11423.11423.5 8.09 8.09 2.469 5 3 3 0 832.7891 3920.0254 S825s S829s S832s TMT10 816 (R) YHLVDKEHDsAEGsHVsGQSNGRDPQALAK (A) Y(0.0)HLVDKEHDS(0.99)AEGS(0.99)HVS(0.99)GQS(0.0)NGRDPQALAK K:TMT10,s:Phosphorylated S AGO3 98556.6 1 1 7033.1 8.09 HUMAN 1 15.5078 14.1859 LVDRKTGSQYDIQDA-p P15924;S2526-p LVDRKTGSQYDIQDA 0.948248294818685 0.0312577537776141 -0.0166666666666667 0.595666666666667 0.458187249290178 20.3299814583441 -0.0166666666666667 0.595666666666667 0.89987311133634 0.0092683378037099 -0.131841608819116 3.94635775591856 P15924 DSP P15924.S2526.p_DSP P15924_S2526s _1_1_2526_2526 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19447.19447.2 9.26 4.74 2.189 3 1 1 0 996.4918 1912.0064 S2526s TMT10 2524 (K) TGsQYDIQDAIDK (G) T(0.0)GS(0.99)QY(0.0)DIQDAIDK K:TMT10,s:Phosphorylated S DSP 334221.3 2 15 104.1 590.4 HUMAN 1 -0.4582 20.33 LVEDKPGSRRRRSYS-p Q08170;S179-p LVEDKPGSRRRRSYS 0.148374825932688 0.146339254233682 0.361333333333333 -0.150666666666667 16.7198551026649 10.9932969686022 0.361333333333333 -0.150666666666667 0.0212821005006714 0.0795555171367315 3.20765965651406 -2.15396466547708 Q08170 SRSF4 Q08170.S179.p_SRSF4 Q08170_S179s _1_1_179_179 Q08170 Q08170 Serine/arginine-rich splicing factor 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7047.7047.4 10.29 7.8 99 1 1 1 0 424.4896 1614.9692 S179s TMT10 172 (R) LVEDKPGsRR (R) LVEDKPGS(1.0)RR K:TMT10,s:Phosphorylated S SRSF4 56791.5 4 1 743.2 233.79 HUMAN 1 16.7199 -10.9933 LVEKLPDSPALAKKA-p G0XQ39;S681-p LVEKLPDSPALAKKA 0.259166336069483 0.82332373247944 -0.226666666666667 -0.053 11.1460935700003 1.1828421369205 -0.226666666666667 -0.053 0.0768052032908979 0.761580448700342 -2.18172367725094 -0.319101612000992 G0XQ39 STIM1 G0XQ39.S681.p_STIM1 G0XQ39_S681s _1_1_681_681 G0XQ39 G0XQ39|Q13586|E9PNJ4 STIM1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24638.24638.5 21.94 17.9 11.233 2 1 1 0 608.3528 2957.7643 S681s TMT10 665 (R) LIEGVHPGSLVEKLPDsPALAK (K) LIEGVHPGS(0.0)LVEKLPDS(0.99)PALAK K:TMT10,s:Phosphorylated S STIM1 88986.4 11 3 771.1 227.77 HUMAN 1 -11.1461 -1.1828 LVENGADSDEDDNSF-p Q9UHB6-4;S687-p LVENGADSDEDDNSF 0.602239550710979 0.0123824029349833 0.0733333333333333 0.376 4.06838739424031 26.6162105668019 0.0733333333333333 0.376 0.3918873642215 0.00217961076059073 0.930179537979684 5.45771470955902 Q9UHB6 LIMA1 Q9UHB6.4.S687.p_LIMA1 Q9UHB6-4_S687s _1_1_687_687 Q9UHB6-4 Q9UHB6-4|Q9UHB6-5|Q9UHB6-2|F8VQE1|Q9UHB6-3|F8VS07 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21267.21267.3 30.26 24.91 5.895 3 1 1 0 1225.871 3595.6383 S687s TMT10 669 (K) EGHSLEMENENLVENGADsDEDDNSFLK (Q) EGHS(0.0)LEMENENLVENGADS(0.99)DEDDNS(0.0)FLK K:TMT10,s:Phosphorylated S LIMA1 85678.4 21 28 42.1 822.82 HUMAN 1 4.0684 26.6162 LVEPHSPSPSSKFST-p O15014;S578-p LVEPHSPSPSSKFST 0.926761802984139 0.934066297474423 -0.0153333333333333 0.012 0.652054367935131 0.418641660157713 -0.0153333333333333 0.012 0.860586567717795 0.908104512984716 -0.18416824776553 0.120926188436872 O15014 ZNF609 O15014.S578.p_ZNF609 O15014_S578s _1_1_578_578 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10450.10450.3 15.04 15.04 2.202 4 1 1 0 601.6531 1722.9791 S578s TMT10 571 (R) LVEPHSPsPSSK (F) LVEPHS(0.0)PS(0.99)PS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ZNF609 152443.5 1 15 63.1 699.07 HUMAN 1 -0.6521 0.4186 LVEPPPMSLPGAGLS-p Q13263;S816-p LVEPPPMSLPGAGLS 0.492994289859056 0.285701602397592 0.0963333333333333 0.191 5.65509180142666 7.17835326468068 0.0963333333333333 0.191 0.27195110003056 0.191498190029365 1.22286818752455 1.49177559009103 Q13263 TRIM28 Q13263.S816.p_TRIM28 Q13263_S816s _1_1_816_816 Q13263 Q13263|Q13263-2 Transcription intermediary factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37338.37338.3 19 15.25 1.113 5 1 1 0 1087.2002 3179.6132 S816s TMT10 805 (K) FSAVLVEPPPMsLPGAGLSSQELSGGPGDGP (-) FS(0.0)AVLVEPPPMS(0.99)LPGAGLS(0.0)S(0.0)QELS(0.0)GGPGDGP s:Phosphorylated S TRIM28 90316.8 2 23 118.1 555.36 HUMAN 1 5.6551 7.1784 LVEQRIRSFPDFPTP-p P07741;S15-p LVEQRIRSFPDFPTP 0.96915478726984 0.274856625234899 -0.00700000000000002 -0.117333333333333 0.266106997279599 7.39113925828575 -0.007 -0.117333333333333 0.940566053383607 0.182341731360836 -0.0780857192684638 -1.52887483935924 P07741 APRT P07741.S15.p_APRT P07741_S15s _1_1_15_15 P07741 P07741|H3BQZ9|P07741-2|H3BSW3 Adenine phosphoribosyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.28568.28568.3 16.2 16.2 7.443 2 1 1 0 682.0247 1964.0955 S15s TMT10 13 (R) IRsFPDFPTPGVVFR (D) IRS(0.99)FPDFPT(0.0)PGVVFR s:Phosphorylated S APRT 19778.6 2 2 1901.1 108.33 HUMAN 1 -0.2661 -7.3911 LVERALGSPTKQLLP-p Q9NR45;S275-p LVERALGSPTKQLLP 0.391751290825875 0.502755039331396 0.120666666666667 -0.147666666666667 7.50432675606726 3.99940476716481 0.120666666666667 -0.147666666666667 0.177650864156973 0.398161737836633 1.5490356412478 -0.916860551605109 Q9NR45 NANS Q9NR45.S275.p_NANS Q9NR45_S275s _1_1_275_275 Q9NR45 Q9NR45 Sialic acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10385.10808.2 10.24 4.06 2.352 2 1 1 0 606.3437 1131.7138 S275s TMT10 272 (R) ALGsPTK (Q) ALGS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S NANS 40763.2 4 3 3864.1 41.56 HUMAN 1 7.5043 -3.9994 LVERRRNSEPPPAAA-p Q3KP66-3;S161-p LVERRRNSEPPPAAA 0.115120255396574 0.0219973880959178 0.476 -0.921 19.5462499953043 22.6503059591468 0.476 -0.921 0.0111013296859388 0.00543212061019243 3.78224032236748 -4.46733803345116 Q3KP66 C1orf106 Q3KP66.3.S161.p_C1orf106 Q3KP66-3_S161s _1_1_161_161 Q3KP66-3 Q3KP66|Q3KP66-3 Isoform 2 of Innate immunity activator protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14015.14015.3 11.23 11.23 99 1 1 1 0 618.9973 1775.0125 S161s TMT10 159 (R) RNsEPPPAAALPLGR (E) RNS(1.0)EPPPAAALPLGR s:Phosphorylated S INAVA 64150.1 1 2 2361.1 86.54 HUMAN 1 19.5462 -22.6503 LVFISVNTPTKTYGM-p O60701;T91-p LVFISVNTPTKTYGM 0.248798577375663 0.484620026983337 -0.216333333333333 0.0946666666666667 11.5313246973595 4.20092109413577 -0.216333333333333 0.0946666666666667 0.0702857899471834 0.380108770591991 -2.24946964476884 0.955178433810457 O60701 UGDH O60701.T91.p_UGDH O60701_T91t _1_1_91_91 O60701 O60701 UDP-glucose 6-dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27521.27521.2 18.06 15.39 1.118 3 1 1 0 1036.559 1992.1418 T91t TMT10 81 (K) EADLVFISVNtPTK (T) EADLVFIS(0.0)VNT(0.99)PT(0.0)K K:TMT10,t:Phosphorylated T UGDH 55707.7 4 1 4410.1 31.87 HUMAN 1 -11.5313 4.2009 LVFLGEQSVGKTSLI-p P20340-2;S23-p LVFLGEQSVGKTSLI 0.398763482674499 0.233566221998339 -0.139666666666667 0.181666666666667 7.36869496102476 8.31683758730206 -0.139666666666667 0.181666666666667 0.183286510886423 0.14733849902413 -1.52540938590636 1.68952561462728 P20340 RAB6A P20340.2.S23.p_RAB6A P20340-2_S23s _1_1_23_23 P20340-2 P20340|P20340-2|Q9NRW1|P20340-3|F5GX61|C9J0I2 Isoform 2 of Ras-related protein Rab-6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27068.27068.3 12.4 10.52 99 1 1 1 0 572.3226 1634.9882 S23s TMT10 16 (K) LVFLGEQsVGK (T) LVFLGEQS(1.0)VGK K:TMT10,s:Phosphorylated S RAB6A 23662.4 3 2 2158.1 95.2 HUMAN 1 -7.3687 8.3168 LVGGVDQSPRGMKIR-p P33993;S365-p LVGGVDQSPRGMKIR 0.534705148071304 0.0328142989576861 0.158666666666667 0.278333333333333 5.03240883529906 20.0190225454827 0.158666666666667 0.278333333333333 0.31387672785627 0.00995629475694786 1.10999390445497 3.87939947861412 P33993 MCM7 P33993.S365.p_MCM7 P33993_S365s _1_1_365_365 P33993 P33993|P33993-3 DNA replication licensing factor MCM7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.34715.34715.3 21.09 21.09 99 1 1 1 0 620.6894 1780.0894 S365s TMT10 353 (K) ALLLLLVGGVDQsPR (G) ALLLLLVGGVDQS(1.0)PR s:Phosphorylated S MCM7 81934.1 6 4 1064.1 181.73 HUMAN 1 5.0324 20.019 LVGTPPESPSEPRED-p A6NDB9;S155-p LVGTPPESPSEPRED 0.672048315140611 0.105764786101113 0.107666666666667 0.203333333333333 3.23385526605589 12.8902613108473 0.107666666666667 0.203333333333333 0.474913454380652 0.0514012722996709 0.767523561136865 2.48995890175404 A6NDB9 PALM3 A6NDB9.S155.p_PALM3 A6NDB9_S143sT151tS155s_3_3_143_155 A6NDB9 A6NDB9 Paralemmin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.31435.31636.4 16.83 16.83 1.666 4 3 3 0 917.696 3427.8535 S143s T151t S155s TMT10 141 (K) RAsLPAGLVGtPPEsPSEPREDVLGFLPGPR (Q) RAS(0.99)LPAGLVGT(0.99)PPES(0.99)PS(0.0)EPREDVLGFLPGPR s:Phosphorylated S,t:Phosphorylated T PALM3 72036.5 1 10 888.1 205.52 HUMAN 1 3.2339 12.8903 LVHRRIHSGEKPFKC-p Q16587;S467-p LVHRRIHSGEKPFKC 0.259441883712572 0.00196312166393669 -0.18 -0.825333333333333 11.1165487523579 42.3045598526674 -0.18 -0.825333333333333 0.0773294862280771 5.88225726428238e-05 -2.17654036979617 -11.2181041783886 Q16587 ZNF74 Q16587.S467.p_ZNF74 Q16587_S467s _1_1_467_467 Q16587 Q9UK10|Q16587|Q16587-3|Q16587-2|Q16587-4|Q8NCK3 Zinc finger protein 74 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10931.10931.3 9.59 9.59 99 1 1 1 0 604.0118 1730.0568 S467s TMT10 465 (R) IHsGEKPFK (C) IHS(1.0)GEKPFK K:TMT10,s:Phosphorylated S ZNF74 74202.6 1 67 240.54 415.72 HUMAN 1 -11.1165 -42.3046 LVHTTSDSDSDDGGQ-p Q68DA7-5;S148-p LVHTTSDSDSDDGGQ 0.307142145800385 0.00956560024781388 -0.283 0.515333333333333 9.58598698283705 28.4832955480083 -0.283 0.515333333333333 0.110002182461048 0.0014179811096056 -1.9098631029486 5.97476508649778 Q68DA7 FMN1 Q68DA7.5.S148.p_FMN1 Q68DA7-5_S148sS150s_2_2_148_150 Q68DA7-5 Q68DA7-5|Q68DA7-3 Isoform 5 of Formin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11840.11840.4 12.79 12.79 1.197 9 2 2 0 881.3769 3362.5508 S148s S150s TMT10 139 (R) GTLVHTTSDsDsDDGGQEPEEGSSTNGPK (S) GT(0.0)LVHT(0.0)T(0.0)S(0.0)DS(0.99)DS(0.99)DDGGQEPEEGS(0.0)S(0.0)T(0.0)NGPK K:TMT10,s:Phosphorylated S FMN1 132895.4 1 13 727.1 236.56 HUMAN 1 -9.586 28.4833 LVHVEYCSK______-p Q53EZ4;S463-p LVHVEYCSK______ 0.175566091093158 0.721778811170704 0.314333333333333 -0.0423333333333333 15.0254836875262 1.95162079955383 0.314333333333333 -0.0423333333333333 0.0314377626843556 0.638025328856738 2.88323202700978 -0.498003953223352 Q53EZ4 CEP55 Q53EZ4.S463.p_CEP55 Q53EZ4_S463s _1_1_463_463 Q53EZ4 Q53EZ4 Centrosomal protein of 55 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19347.19347.3 12.17 12.17 2.973 2 1 1 0 634.3268 1820.9981 S463s TMT10 454 (R) DLLVHVEYCsK (-) DLLVHVEY(0.0)CS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CEP55 54519.6 1 5 2677.1 74.29 HUMAN 1 15.0255 -1.9516 LVINLNRSNPKLKDL-p Q9Y5B9;S658-p LVINLNRSNPKLKDL 0.337362550356468 0.00437637139346334 -0.230333333333333 0.589 8.79177177580589 34.663853136162 -0.230333333333333 0.589 0.132075669983057 0.000341676166961264 -1.77231829551989 7.97128243699064 Q9Y5B9 SUPT16H Q9Y5B9.S658.p_SUPT16H Q9Y5B9_S658s _1_1_658_658 Q9Y5B9 Q9Y5B9 FACT complex subunit SPT16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17479.17479.3 16.29 16.29 6.316 2 1 1 0 712.7258 2056.1915 S658s TMT10 648 (K) QDSLVINLNRsNPK (L) QDS(0.0)LVINLNRS(0.99)NPK K:TMT10,s:Phosphorylated S SUPT16H 120482.1 4 4 1519.1 134.4 HUMAN 1 -8.7918 34.6639 LVKLCVGSPVRQRRS-p Q7Z6Z7;S1077-p LVKLCVGSPVRQRRS 0.687583327752753 0.31520680144833 -0.0853333333333334 0.144666666666667 3.05544011430995 6.62596186734559 -0.0853333333333334 0.144666666666667 0.494829962278789 0.21747223272192 -0.731650489236738 1.39500250526876 Q7Z6Z7 HUWE1 Q7Z6Z7.S1077.p_HUWE1 Q7Z6Z7_S1077s _1_1_1077_1077 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9689.9689.3 7.71 7.71 99 1 1 1 0 494.261 1400.7994 S1077s TMT10 1073 (K) LCVGsPVRQR (R) LCVGS(1.0)PVRQR C:Carbamidomethylation,s:Phosphorylated S HUWE1 485818.9 1 7 11.1 1210.45 HUMAN 1 -3.0554 6.626 LVKLLGASELPIVTP-p P52292;S305-p LVKLLGASELPIVTP 0.739021165125623 0.982319611872564 0.059 0.004 2.49065356587074 0.112312861762173 0.059 0.00400000000000004 0.563552840882664 0.97447053927364 0.614913710152512 0.0335052479064506 P52292 KPNA2 P52292.S305.p_KPNA2 P52292_S305s _1_1_305_305 P52292 P52292 Importin subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.34815.34815.3 9.56 9.56 9.561 2 1 1 0 620.3569 1779.0941 S305s TMT10 301 (K) LLGAsELPIVTPALR (A) LLGAS(0.99)ELPIVT(0.0)PALR s:Phosphorylated S KPNA2 58203.2 1 6 1475.1 139.39 HUMAN 1 2.4907 0.1123 LVKPLPDSEEEGHDN-p Q15596;S210-p LVKPLPDSEEEGHDN 0.135150528241429 0.0417675842092363 -0.574666666666667 0.340333333333333 17.8295634938963 18.4825941658836 -0.574666666666667 0.340333333333333 0.0164832805540791 0.0141821013091682 -3.42785404326931 3.55758861866651 Q15596 NCOA2 Q15596.S210.p_NCOA2 Q15596_S210s _1_1_210_210 Q15596 Q15596|E7EWM1 Nuclear receptor coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13649.13649.5 20.15 20.15 99 1 1 1 0 660.5356 3218.6719 S210s TMT10 202 (R) MLVKPLPDsEEEGHDNQEAHQK (Y) MLVKPLPDS(1.0)EEEGHDNQEAHQK K:TMT10,s:Phosphorylated S NCOA2 160009.7 1 2 290.1 381.81 HUMAN 1 -17.8296 18.4826 LVKQQAPSDEELPEV-p Q9H3R0;S593-p LVKQQAPSDEELPEV 0.233121410286087 0.0142629931334825 -0.238333333333333 0.365666666666667 12.153869353427 25.5935235180868 -0.238333333333333 0.365666666666667 0.0608994071247278 0.00275833905244885 -2.35965678980149 5.18900794165356 Q9H3R0 KDM4C Q9H3R0.S593.p_KDM4C Q9H3R0_S593s _1_1_593_593 Q9H3R0 Q9H3R0 Lysine-specific demethylase 4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37234.37234.4 19.28 13.15 3.142 4 1 1 0 910.6916 3559.758 S593s TMT10 589 (K) QQAPsDEELPEVLSIEEEVEETESWAK (P) QQAPS(0.99)DEELPEVLS(0.0)IEEEVEET(0.0)ES(0.0)WAK K:TMT10,s:Phosphorylated S KDM4C 122033.6 1 2 4239.1 34.96 HUMAN 1 -12.1539 25.5935 LVLGEAPS_______-p Q9NZQ3-3;S715-p LVLGEAPS_______ 0.880959558381171 0.639649946505501 0.03 -0.0893333333333333 1.08307016657796 2.64248700876479 0.03 -0.0893333333333334 0.779279018494759 0.544190929976776 0.294587837399361 -0.646727719107349 Q9NZQ3 NCKIPSD Q9NZQ3.3.S715.p_NCKIPSD Q9NZQ3-3_S715s _1_1_715_715 Q9NZQ3-3 Q9NZQ3|Q9NZQ3-3 Isoform 3 of NCK-interacting protein with SH3 domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30401.30401.2 13.38 11.39 99 1 1 1 0 685.8438 1290.7143 S715s TMT10 706 (K) EFLVLGEAPs (-) EFLVLGEAPS(1.0) s:Phosphorylated S NCKIPSD 78977.7 1 3 3371.1 52.66 HUMAN 1 1.0831 -2.6425 LVLLGRPSPGAVGPE-p A0A0G2JPP5;S1625-p LVLLGRPSPGAVGPE 0.301887758255495 0.419192834061291 0.146333333333333 0.101333333333333 9.74825971455237 5.02494764768846 0.146333333333333 0.101333333333333 0.105967826965338 0.314416432156421 1.93800587400775 1.10840297269976 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1625.p_SCRIB A0A0G2JPP5_S1606sS1625s_2_2_1606_1625 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33416.33416.4 20.79 20.79 2.287 6 2 2 0 1137.037 4385.2132 S1606s S1625s TMT10 1600 (R) SLEPSPsPGPQEEDGEVALVLLGRPsPGAVGPEDVALCSSR (R) S(0.0)LEPS(0.0)PS(0.99)PGPQEEDGEVALVLLGRPS(0.99)PGAVGPEDVALCS(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S SCRIB 178690.9 3 51 22.1 1004.81 HUMAN 1 9.7483 5.0249 LVLLGSGSVGKSSLA-p Q9H0T7;S29-p LVLLGSGSVGKSSLA 0.167787448802573 0.118216589718118 -0.239 0.179333333333333 15.4844871647218 12.2286022335144 -0.239 0.179333333333333 0.0282846809009637 0.0598604223409182 -2.96982069050744 2.37173906659806 Q9H0T7 RAB17 Q9H0T7.S29.p_RAB17 Q9H0T7_S29s _1_1_29_29 Q9H0T7 Q9H0T7|F8WBE9|F8WAG1 Ras-related protein Rab-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26173.26173.3 12.62 10.52 1.309 2 1 1 0 523.3124 1487.9561 S29s TMT10 22 (K) LVLLGSGsVGK (S) LVLLGS(0.0)GS(0.99)VGK K:TMT10,s:Phosphorylated S RAB17 23718.6 2 1 6279.1 12.62 HUMAN 1 -15.4845 12.2286 LVLQYAPSA______-p M0QXB4;S330-p LVLQYAPSA______ 0.827167687684 0.655353797565744 0.046 0.0493333333333333 1.58619665671036 2.50873105223308 0.046 0.0493333333333334 0.694033341147643 0.561211930359699 0.415078830588397 0.618654097475854 M0QXB4 COPE M0QXB4.S330.p_COPE M0QXB4_S330s _1_1_330_330 M0QXB4 M0QXB4|O14579|O14579-2|O14579-3 Coatomer protein complex, subunit epsilon, isoform CRA_g HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27514.27514.3 15.81 9.74 6.829 2 1 1 0 682.9955 1967.0072 S330s TMT10 317 (K) ENDFDRLVLQYAPsA (-) ENDFDRLVLQY(0.0)APS(0.99)A s:Phosphorylated S COPE 37094.2 1 4 2437.1 83.45 HUMAN 1 1.5862 2.5087 LVLSDKHSPQKKSTV-p Q8NEZ4-3;S2811-p LVLSDKHSPQKKSTV 0.855856838033951 0.0104490940641479 -0.027 -0.501 1.31496286665586 27.7959369573124 -0.027 -0.501 0.738760579567921 0.00166114026072849 -0.351118724437103 -5.78028238832571 Q8NEZ4 KMT2C Q8NEZ4.3.S2811.p_KMT2C Q8NEZ4-3_S2811s _1_1_2811_2811 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11827.11827.4 17.6 15.12 5.464 3 1 1 0 530.8096 2040.242 S2811s TMT10 2803 (K) TLVLSDKHsPQK (K) T(0.0)LVLS(0.0)DKHS(0.99)PQK K:TMT10,s:Phosphorylated S KMT2C 554869.1 4 14 88.1 626.31 HUMAN 1 -1.315 -27.7959 LVLSEMNSPSRTQTG-p Q4V328;S655-p LVLSEMNSPSRTQTG 0.579491686520163 0.0882377760680853 0.088 0.245 4.3575628095728 13.9558770861386 0.088 0.245 0.366643271202525 0.0402172426442079 0.984890237106564 2.68321755879931 Q4V328 GRIPAP1 Q4V328.S655.p_GRIPAP1 Q4V328_S655s _1_1_655_655 Q4V328 Q4V328|Q4V328-4|A0A075B793|A0A087WT45|Q4V328-2|Q4V328-3 GRIP1-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29164.29164.3 11.75 9.87 1.26 4 1 1 0 686.3353 1977.016 S655s TMT10 643 (R) SGLEELVLSEMNsPSR (T) S(0.0)GLEELVLS(0.0)EMNS(0.99)PS(0.0)R s:Phosphorylated S GRIPAP1 96330.2 2 5 1542.1 132.91 HUMAN 1 4.3576 13.9559 LVLSGADSDEDTSRA-p O75128-2;S272-p LVLSGADSDEDTSRA 0.173708802316769 0.0288397521665792 0.230666666666667 -0.282333333333333 15.141146747218 20.851804217779 0.230666666666667 -0.282333333333333 0.0306115503416909 0.00821901131286089 2.90496552409774 -4.06018100974072 O75128 COBL O75128.2.S272.p_COBL O75128-2_S272s _1_1_272_272 O75128-2 O75128-2 Isoform 2 of Protein cordon-bleu HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15871.15871.2 21.95 21.95 3.478 4 1 1 0 1051.4776 2021.9825 S272s TMT10 262 (K) AEQLVLSGADsDEDTSR (A) AEQLVLS(0.0)GADS(0.99)DEDT(0.0)S(0.0)R s:Phosphorylated S COBL 144838.3 3 5 254.1 405.31 HUMAN 1 15.1411 -20.8518 LVMTKTKTQRGLMEP-p Q8TBZ2;T290-p LVMTKTKTQRGLMEP 0.270244427220673 0.146649499058677 -0.195666666666667 0.220333333333333 10.7676032207957 10.9791378058021 -0.195666666666667 0.220333333333333 0.0837991624354383 0.079815312692554 -2.11544335591389 2.15148701029175 Q8TBZ2 MYCBPAP Q8TBZ2.T290.p_MYCBPAP Q8TBZ2_T288tT290t_2_2_288_290 Q8TBZ2 Q8TBZ2 MYCBP-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9775.9775.4 7.2 7.2 7.203 3 2 2 0 547.2701 2010.148 T288t T290t M295m Hydrogen 288 (K) tKtQRGLmEPITHIR (K) T(0.99)KT(0.99)QRGLM(1.0)EPIT(0.0)HIR K:TMT10-Lys-Only,t:Phosphorylated T,m:Oxidized methionine MYCBPAP 108664.2 1 1 7231.1 7.2 HUMAN 1 -10.7676 10.9791 LVNCQNKSLSQSFEN-p Q8TC07-2;S201-p LVNCQNKSLSQSFEN 0.187534582157854 0.00701280965659559 0.223 0.484333333333333 14.2655780023205 30.8722054832429 0.223 0.484333333333333 0.0374491702636294 0.00081804925163084 2.74181072122431 6.69093272988702 Q8TC07 TBC1D15 Q8TC07.2.S201.p_TBC1D15 Q8TC07-2_S201s _1_1_201_201 Q8TC07-2 Q8TC07-3|Q8TC07-2 Isoform 2 of TBC1 domain family member 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37223.37223.2 14.28 14.28 1.223 4 1 1 0 1395.7225 2710.4704 S201s TMT10 201 (K) sLSQSFENLLDEPAYGLIQK (I) S(0.99)LS(0.0)QS(0.0)FENLLDEPAY(0.0)GLIQK K:TMT10,s:Phosphorylated S TBC1D15 78306.6 8 5 1180.1 169.17 HUMAN 1 14.2656 30.8722 LVNEKHIYLLPSGRI-p P17174;Y381-p LVNEKHIYLLPSGRI 0.689385882760621 0.513782915869778 0.078 -0.0913333333333333 3.02977990634371 3.88059488007771 0.078 -0.0913333333333333 0.497762310155721 0.409204604599268 0.726454468965274 -0.894087158562589 P17174 GOT1 P17174.Y381.p_GOT1 P17174_Y381y _1_1_381_381 P17174 P17174|P17174-2 Aspartate aminotransferase, cytoplasmic GG20160819_MSz_CCLE_T4D7_pY_Injection_01.19452.19452.2 11.18 11.18 11.184 2 1 1 0 682.8685 1284.7626 Y381y TMT10 379 (K) HIyLLPSGR (I) HIY(0.99)LLPS(0.0)GR y:Phosphorylated Y GOT1 46474.8 2 1 317.1 11.18 HUMAN 1 3.0298 -3.8806 LVNIYDLSDEDAGWR-p Q4G0A6;S123-p LVNIYDLSDEDAGWR 0.394475075080111 0.00306142046330255 -0.115666666666667 0.672333333333333 7.45514904015606 37.7820497262075 -0.115666666666667 0.672333333333334 0.179673941903583 0.00016664605127137 -1.54047264986127 9.1771435263895 Q4G0A6 FAM188B Q4G0A6.S123.p_FAM188B Q4G0A6_S123s _1_1_123_123 Q4G0A6 Q4G0A6 Probable ubiquitin carboxyl-terminal hydrolase MINDY-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26843.26843.4 16.16 16.16 3.616 10 1 1 0 929.6907 3635.7787 S123s TMT10 111 (R) CSETTLVNIYDLsDEDAGWRTSLSETSK (A) CS(0.0)ET(0.0)T(0.0)LVNIY(0.0)DLS(0.99)DEDAGWRT(0.0)S(0.0)LS(0.0)ET(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MINDY4 85283.1 3 1 2508.1 80.6 HUMAN 1 -7.4551 37.782 LVPALGESWGHAATI-p O43502;S304-p LVPALGESWGHAATI 0.48374924621179 0.912652553068003 -0.120666666666667 -0.0243333333333333 5.80840776814574 0.555979198377408 -0.120666666666667 -0.0243333333333333 0.262518082371987 0.879836713630209 -1.25035679533356 -0.158449893766551 O43502 RAD51C O43502.S304.p_RAD51C O43502_S304s _1_1_304_304 O43502 O43502|J3QKK3 DNA repair protein RAD51 homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24375.24375.4 15.1 15.1 5.97 2 1 1 0 700.1241 2717.5048 S304s TMT10 290 (K) IDRNQALLVPALGEsWGHAATIR (L) IDRNQALLVPALGES(0.99)WGHAAT(0.0)IR s:Phosphorylated S RAD51C 42759.4 1 2 4486.1 30.8 HUMAN 1 -5.8084 -0.556 LVPEGLQSPRGTPDS-p B2RTY4-5;S1081-p LVPEGLQSPRGTPDS 0.997068365879862 0.434929687601617 0.000666666666666667 -0.0883333333333333 0.0219768868736351 4.81839786167655 0.000666666666666669 -0.0883333333333333 0.994952416867717 0.32973132960334 0.00662371766471154 -1.07046130007745 B2RTY4 MYO9A B2RTY4.5.S1081.p_MYO9A B2RTY4-5_S1081s _1_1_1081_1081 B2RTY4-5 B2RTY4-4|B2RTY4-2|H3BRD5|B2RTY4-5 Isoform 5 of Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24690.24690.3 14.7 12.63 14.705 3 1 1 0 636.653 1827.9802 S1081s TMT10 1070 (R) WSTELVPEGLQsPR (G) WS(0.0)T(0.0)ELVPEGLQS(0.99)PR s:Phosphorylated S MYO9A 267577.4 1 8 457.1 306.95 HUMAN 1 0.022 -4.8184 LVPHMNVSAVEKQVT-p Q96KN2;S384-p LVPHMNVSAVEKQVT 0.694699286180922 0.210672567988127 -0.0543333333333334 -0.156666666666667 2.96780447563904 8.89692214262911 -0.0543333333333334 -0.156666666666667 0.504916487609314 0.128916286141638 -0.713865404967559 -1.78988382881478 Q96KN2 CNDP1 Q96KN2.S384.p_CNDP1 Q96KN2_S374sS384s_2_2_374_384 Q96KN2 Q96KN2|J3KRP0 Beta-Ala-His dipeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8289.8289.5 8.54 2.74 99 2 2 2 0 569.3106 2682.5893 S374s S384s Hydrogen 369 (R) VIGKFsIRLVPHMNVsAVEK (Q) VIGKFS(1.0)IRLVPHMNVS(1.0)AVEK K:TMT10-Lys-Only,s:Phosphorylated S CNDP1 56819.2 1 1 6948.1 8.54 HUMAN 1 -2.9678 -8.8969 LVPSDKFSPRIRANS-p Q5SW79;S1198-p LVPSDKFSPRIRANS 0.9391079209987 0.00714231278100688 -0.0166666666666667 -0.537333333333333 0.533322882376032 30.7353472567565 -0.0166666666666667 -0.537333333333333 0.884438647468524 0.000844238734874511 -0.152339041467199 -6.64813296574601 Q5SW79 CEP170 Q5SW79.S1198.p_CEP170 Q5SW79_S1198s _1_1_1198_1198 Q5SW79 Q5SW79|Q5SW79-3|Q5SW79-2 Centrosomal protein of 170 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16366.16366.3 9.66 6.56 1.618 2 1 1 0 561.98 1603.9572 S1198s TMT10 1191 (R) LVPSDKFsPR (I) LVPS(0.0)DKFS(0.99)PR K:TMT10,s:Phosphorylated S CEP170 175689.3 1 21 128.1 537.52 HUMAN 1 -0.5333 -30.7353 LVQASRGTPQDLARA-p Q9Y490;T1263-p LVQASRGTPQDLARA 0.780756931589904 0.197188894437825 0.0396666666666667 0.130333333333333 2.0676418983929 9.27701919938005 0.0396666666666667 0.130333333333333 0.621206240866623 0.118113103235408 0.523730255066664 1.85563729809539 Q9Y490 TLN1 Q9Y490.T1263.p_TLN1 Q9Y490_T1263t _1_1_1263_1263 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28315.28315.3 19.99 16 2.137 3 1 1 0 1058.8738 3094.6443 T1263t TMT10 1242 (R) LNEAAAGLNQAATELVQASRGtPQDLAR (A) LNEAAAGLNQAAT(0.0)ELVQAS(0.0)RGT(0.99)PQDLAR t:Phosphorylated T TLN1 271930.4 4 18 267.1 395.2 HUMAN 1 2.0676 9.277 LVQDGVASPATPGTG-p Q8IWJ2;S11-p LVQDGVASPATPGTG 0.308639920982799 0.188390843014669 -0.146666666666667 -0.144666666666667 9.54271504193781 9.53448736063622 -0.146666666666667 -0.144666666666667 0.111103693259912 0.11131437800667 -1.90236180003113 -1.90020717592283 Q8IWJ2 GCC2 Q8IWJ2.S11.p_GCC2 Q8IWJ2_S11s _1_1_11_11 Q8IWJ2 Q8IWJ2|Q8IWJ2-3 GRIP and coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25257.25257.3 10.19 10.19 1.122 3 1 1 0 742.0203 2144.0743 S11s Acetyl 1 (-) MEDLVQDGVAsPATPGTGK (S) MEDLVQDGVAS(0.99)PAT(0.0)PGT(0.0)GK K:TMT10,s:Phosphorylated S GCC2 196990.2 1 88 9.3 1298.62 HUMAN 1 -9.5427 -9.5345 LVQEENLSPGTQTPS-p Q9Y2X9;S651-p LVQEENLSPGTQTPS 0.313268519533153 0.796906731608535 0.172333333333333 -0.0426666666666667 9.4263043476343 1.37755200136746 0.172333333333333 -0.0426666666666667 0.114122050223938 0.728190149649532 1.88218771482957 -0.366036315907218 Q9Y2X9 ZNF281 Q9Y2X9.S651.p_ZNF281 Q9Y2X9_S651s_1_1_651_651 Q9Y2X9 Q9Y2X9|Q9Y2X9-2 Zinc finger protein 281 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14657.14657.4 21.48 17.16 1.218 7 1 1 0 922.6938 3606.7924 N649n S651s TMT10 633 (R) VDLHTSGEHSELVQEEnLsPGTQTPSNDK (A) VDLHT(0.0)S(0.0)GEHS(0.0)ELVQEEN(0.99)LS(0.99)PGT(0.0)QT(0.0)PS(0.0)N(0.0)DK K:TMT10,n:Deamidated,s:Phosphorylated S ZNF281 97654.7 2 11 1522.1 134.23 HUMAN 1 9.4263 -1.3776 LVQGVRGSQAQAEDL-p Q9Y4G6;S975-p LVQGVRGSQAQAEDL 0.901766467080187 0.495868620024601 0.0283333333333333 0.0666666666666667 0.882166052529091 4.07439124997047 0.0283333333333333 0.0666666666666667 0.816175200793157 0.391345978199115 0.24405411634791 0.931163224702757 Q9Y4G6 TLN2 Q9Y4G6.S975.p_TLN2 Q9Y4G6_S975s_1_1_975_975 Q9Y4G6 Q9Y4G6 Talin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.33843.33843.5 26.27 22.9 6.897 5 1 1 0 985.7326 4843.6471 S975s N994n TMT10 960 (K) AVADHIPQLVQGVRGsQAQAEDLSAQLALIISSQnFLQPGSK (M) AVADHIPQLVQGVRGS(0.99)QAQAEDLS(0.0)AQLALIIS(0.0)S(0.0)QN(1.0)FLQPGS(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated TLN2 273947.6 2 31 267.2 395.2 HUMAN 1 0.8822 4.0744 LVQNAAGSQEKLAQA-p Q9Y490;S2040-p LVQNAAGSQEKLAQA 0.871018959211531 0.348058644969294 -0.0243333333333333 0.126666666666667 1.1751020688257 6.07486266752583 -0.0243333333333333 0.126666666666667 0.762938960194854 0.246895817699514 -0.317242028006613 1.29757648603484 Q9Y490 TLN1 Q9Y490.S2040.p_TLN1 Q9Y490_S2040s _1_1_2040_2040 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13972.13972.2 16.61 13.77 99 1 1 1 0 891.4825 1701.99 S2040s TMT10 2032 (K) VLVQNAAGsQEK (L) VLVQNAAGS(1.0)QEK K:TMT10,s:Phosphorylated S TLN1 271930.4 3 24 267.1 395.2 HUMAN 1 -1.1751 6.0749 LVQPPPVSPVVLIQG-p Q99941;S279-p LVQPPPVSPVVLIQG 0.959344047178047 0.881726598410713 -0.0143333333333333 0.0156666666666667 0.349013617637748 0.767793167756697 -0.0143333333333333 0.0156666666666667 0.922780988079729 0.837954973996578 -0.101536392316106 0.214552170054374 Q99941 ATF6B Q99941.S279.p_ATF6B Q99941_S279s _1_1_279_279 Q99941 Q99941|Q99941-2 Cyclic AMP-dependent transcription factor ATF-6 beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37765.37765.4 22.17 22.17 2.848 5 1 1 0 847.2419 3305.9762 S279s TMT10 260 (R) AVPPSTTVLLQSLVQPPPVsPVVLIQGAIR (V) AVPPS(0.0)T(0.0)T(0.0)VLLQS(0.0)LVQPPPVS(0.99)PVVLIQGAIR s:Phosphorylated S ATF6B 77278.4 1 1 4458.1 31.1 HUMAN 1 -0.349 0.7678 LVQSCPGSLSLCAGV-p Q9UQ35;S1032-p LVQSCPGSLSLCAGV 0.473025507918826 0.034024088461017 0.130333333333333 0.389333333333333 5.99027707336291 19.7901378791633 0.130333333333333 0.389333333333333 0.251751630887229 0.0104950910846501 1.28283132065438 3.83051929261697 Q9UQ35 SRRM2 Q9UQ35.S1032.p_SRRM2 Q9UQ35_S1032s _1_1_1032_1032 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19531.19791.3 18.97 18.97 1.252 5 1 1 0 954.1677 2780.5253 S1032s TMT10 1021 (K) SKDSLVQSCPGsLSLCAGVK (S) S(0.0)KDS(0.0)LVQS(0.0)CPGS(0.99)LS(0.0)LCAGVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SRRM2 300351.7 3 51 2.1 3310.34 HUMAN 1 5.9903 19.7901 LVQSPNSYFMDVKCP-p P42677;Y31-p LVQSPNSYFMDVKCP 0.357172198749098 0.0286113715981068 -0.240666666666667 -0.340666666666667 8.31006757322719 20.8981679769321 -0.240666666666667 -0.340666666666667 0.147568357247827 0.00813173472026407 -1.68891079967031 -4.07038442798587 P42677 RPS27 P42677.Y31.p_RPS27 P42677_Y31y _1_1_31_31 P42677 C9JLI6|P42677|Q71UM5|Q5T4L4 40S ribosomal protein S27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25012.25012.3 15.38 15.38 3.56 3 1 1 0 689.3527 1986.0771 Y31y TMT10 24 (R) LVQSPNSyFMDVK (C) LVQS(0.0)PNS(0.0)Y(0.99)FMDVK K:TMT10,y:Phosphorylated Y RPS27 9803.3 1 3 3354.1 53.07 HUMAN 1 -8.3101 -20.8982 LVRDSLSSPGNFVLT-p O75815;S182-p LVRDSLSSPGNFVLT 0.974387172364495 0.607065857079271 -0.00500000000000001 -0.0726666666666667 0.220519460330311 2.94282226103393 -0.00500000000000001 -0.0726666666666667 0.950491098463268 0.50782932261644 -0.0650219860068709 -0.708676353183258 O75815 BCAR3 O75815.S182.p_BCAR3 O75815_S182s _1_1_182_182 O75815 O75815|O75815-3 Breast cancer anti-estrogen resistance protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30431.30431.3 12.94 12.94 1.363 4 1 1 0 984.1388 2870.4344 S182s Hydrogen 171 (R) DGDFLVRDSLSsPGNFVLTCQWK (N) DGDFLVRDS(0.0)LS(0.0)S(0.99)PGNFVLT(0.0)CQWK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S BCAR3 93533.8 7 4 401.1 327.42 HUMAN 1 -0.2205 -2.9428 LVREKYESFEDPAGT-p Q6ZNJ1;S2143-p LVREKYESFEDPAGT 0.440934916296252 0.616175476545817 -0.109666666666667 -0.053 6.55140145146279 2.85787430272752 -0.109666666666667 -0.053 0.221238066773477 0.517860241743009 -1.38223653285403 -0.691299691177418 Q6ZNJ1 NBEAL2 Q6ZNJ1.S2143.p_NBEAL2 Q6ZNJ1_S2143s _1_1_2143_2143 Q6ZNJ1 Q6ZNJ1|Q6ZNJ1-3|Q6ZNJ1-2 Neurobeachin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17714.17714.3 13.71 7.15 3.496 3 1 1 0 832.7567 2416.2851 S2143s TMT10 2139 (R) EKYEsFEDPAGTIDK (F) EKY(0.0)ES(0.99)FEDPAGT(0.0)IDK K:TMT10,s:Phosphorylated S NBEAL2 305591.9 1 7 1347.1 151.04 HUMAN 1 -6.5514 -2.8579 LVRERPRSLEDLHQK-p B2RTY4-5;S1022-p LVRERPRSLEDLHQK 0.0629489541987992 0.30382626656411 -0.422 -0.141666666666667 26.0821177253575 6.83213572827924 -0.422 -0.141666666666667 0.00246483712970498 0.207389338889864 -5.32316891138064 -1.43121032310915 B2RTY4 MYO9A B2RTY4.5.S1022.p_MYO9A B2RTY4-5_S1022s _1_1_1022_1022 B2RTY4-5 B2RTY4-4|B2RTY4-2|H3BRD5|B2RTY4-5|H3BMM1 Isoform 5 of Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7171.7171.5 13.15 13.15 99 1 1 1 0 481.4752 2323.3813 S1022s TMT10 1018 (R) ERPRsLEDLHQKK (V) ERPRS(1.0)LEDLHQKK K:TMT10,s:Phosphorylated S MYO9A 267577.4 3 5 457.1 306.95 HUMAN 1 -26.0821 -6.8321 LVRIARLSSGEGPTL-p P22607-2;S446-p LVRIARLSSGEGPTL 0.037721822717877 0.00320981770772267 -0.611333333333333 -0.956 32.4485949023277 37.3530600421199 -0.611333333333333 -0.956 0.000569037004848083 0.000183947544898977 -7.21312017234786 -9.00221501159215 P22607 FGFR3 P22607.2.S446.p_FGFR3 P22607-2_S446sS447s_2_2_446_447 P22607-2 P22607-2|F8W9L4|P22607-4|P22607-3 Isoform 2 of Fibroblast growth factor receptor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30103.30103.4 16.85 12.82 2.105 4 2 2 0 796.4075 3022.6825 S446s S447s TMT10 442 (R) IARLssGEGPTLANVSELELPADPK (W) IARLS(0.99)S(0.99)GEGPT(0.0)LANVS(0.0)ELELPADPK K:TMT10,s:Phosphorylated S FGFR3 89125.6 3 4 2711.1 73.11 HUMAN 1 -32.4486 -37.3531 LVRKGCQSLPSNMME-p Q9H0K1;S442-p LVRKGCQSLPSNMME 0.28754762466576 0.0865373283331344 -0.165 0.205666666666667 10.2067630411095 14.0698315984004 -0.165 0.205666666666667 0.0953506583289547 0.0391757067546646 -2.01765626410039 2.70411675718124 Q9H0K1 SIK2 Q9H0K1.S442.p_SIK2 Q9H0K1_S442s _1_1_442_442 Q9H0K1 Q9H0K1 Serine/threonine-protein kinase SIK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31993.31993.4 23.55 23.55 2.902 7 1 1 0 1153.244 4529.9857 S442s TMT10 439 (K) GCQsLPSNMMETSIDEGLETEGEAEEDPAHAFEAFQSTR (S) GCQS(0.99)LPS(0.0)NMMET(0.0)S(0.0)IDEGLET(0.0)EGEAEEDPAHAFEAFQS(0.0)T(0.0)R C:Carbamidomethylation,s:Phosphorylated S SIK2 104769.2 1 2 1626.1 126.2 HUMAN 1 -10.2068 14.0698 LVRLSSDSFARLVEL-p Q9HB09;S245-p LVRLSSDSFARLVEL 0.190522908162136 0.126190345283881 0.295 -0.175333333333333 14.0878934828222 11.8537821946132 0.295 -0.175333333333333 0.039013117138227 0.0652562000290276 2.70907019026139 -2.30529240563587 Q9HB09 BCL2L12 Q9HB09.S245.p_BCL2L12 Q9HB09_S245s _1_1_245_245 Q9HB09 Q9HB09|Q9HB09-3|A0A087WSV0 Bcl-2-like protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11543.11543.2 11.92 9.07 1.491 3 1 1 0 596.2838 1111.5945 S245s TMT10 241 (R) LSSDsFAR (L) LS(0.0)S(0.0)DS(0.99)FAR s:Phosphorylated S BCL2L12 37277.2 1 6 1874.1 109.69 HUMAN 1 14.0879 -11.8538 LVRVGVISFAQKVTN-p Q9UP52;S279-p LVRVGVISFAQKVTN 0.771982430720165 0.314189355223137 0.09 0.128333333333333 2.15047897252633 6.64562581631983 0.09 0.128333333333333 0.609469676646534 0.216489789605455 0.541874687349715 1.3984609026083 Q9UP52 TFR2 Q9UP52.S279.p_TFR2 Q9UP52_S279sT285tS305s_3_3_279_305 Q9UP52 Q9UP52 Transferrin receptor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.37914.37914.5 8.69 1.87 1.264 4 3 3 0 907.4232 4292.2643 S279s T285t N286n S305s Hydrogen 275 (R) VGVIsFAQKVtnAQDFGAQGVLIYPEPADFsQDPPK (P) VGVIS(0.99)FAQKVT(0.99)N(1.0)AQDFGAQGVLIY(0.0)PEPADFS(0.99)QDPPK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated TFR2 89038.7 1 1 6074.1 14.18 HUMAN 1 2.1505 6.6456 LVRVRDLTIQKADEV-p P14868;T52-p LVRVRDLTIQKADEV 0.42014043210147 0.077577122459691 0.144666666666667 0.218 6.95189628742568 14.7296762827743 0.144666666666667 0.218 0.201748526400256 0.0336536653427034 1.45259025797022 2.82610029827636 P14868 DARS P14868.T52.p_DARS P14868_T52t _1_1_52_52 P14868 P14868 Aspartate--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22624.22624.2 13.83 9.45 99 1 1 1 0 991.0224 1901.0694 T52t Hydrogen 50 (R) DLtIQKADEVVWVR (A) DLT(1.0)IQKADEVVWVR K:TMT10-Lys-Only,t:Phosphorylated T DARS 57534.6 1 2 3746.1 44.03 HUMAN 1 6.9519 14.7297 LVSARRRSDLYESEL-p O14578-4;S582-p LVSARRRSDLYESEL 0.585907705398247 0.627449583456485 0.091 -0.0583333333333333 4.26937212661418 2.75318657936805 0.091 -0.0583333333333334 0.374164678543063 0.530495057534726 0.968282695877121 -0.66973017977187 O14578 CIT O14578.4.S582.p_CIT O14578-4_S582s _1_1_582_582 O14578-4 O14578-4|O14578-3 Isoform 4 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6467.6467.4 11.63 11.63 6.784 4 1 1 0 527.0144 2025.0675 S582s TMT10 580 (R) RRsDLYESELRESR (L) RRS(0.99)DLY(0.0)ES(0.0)ELRES(0.0)R s:Phosphorylated S CIT 238656.7 2 10 366.1 342.11 HUMAN 1 4.2694 -2.7532 LVSFHDDSDEDLLHI-p P11717;S2484-p LVSFHDDSDEDLLHI 0.652911308934577 0.679516797990593 0.063 0.042 3.47032773471504 2.29357883910838 0.063 0.042 0.449745914118799 0.589714920496233 0.814424139148963 0.572808195592736 P11717 IGF2R P11717.S2484.p_IGF2R P11717_S2484s _1_1_2484_2484 P11717 P11717 Cation-independent mannose-6-phosphate receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27747.27946.2 18.85 18.85 7.863 2 1 1 0 1032.4784 1983.9861 S2484s TMT10 2477 (K) LVSFHDDsDEDLLHI (-) LVS(0.0)FHDDS(0.99)DEDLLHI s:Phosphorylated S IGF2R 281330.5 23 6 1952.1 105.32 HUMAN 1 3.4703 2.2936 LVSGSQGSPTKPGSN-p Q5VTI5;S736-p LVSGSQGSPTKPGSN 0.543745898579095 0.472373582074559 0.0823333333333333 -0.079 4.8851175674947 4.34237059591793 0.0823333333333333 -0.079 0.324704452001855 0.367928085318051 1.0829626421999 -0.981857074306911 Q5VTI5 NotFound Q5VTI5.S736.p_NotFound Q5VTI5_S736s _1_1_736_736 Q5VTI5 Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30695.30695.5 24.52 23.62 1.205 19 1 1 0 1043.5284 5133.6268 S736s Hydrogen 698 (R) GGLGPSATYSSNSPASPLSSASLTSPLSPFSLVSGSQGsPTKPGSNEPK (A) GGLGPS(0.0)AT(0.0)Y(0.0)S(0.0)S(0.0)NS(0.0)PAS(0.0)PLS(0.0)S(0.0)AS(0.0)LT(0.0)S(0.0)PLS(0.0)PFS(0.0)LVS(0.0)GS(0.0)QGS(0.99)PT(0.0)KPGS(0.0)NEPK K:TMT10-Lys-Only,s:Phosphorylated S PLEKHA6 119745.7 14 22 52.1 743.36 HUMAN 1 4.8851 -4.3424 LVSKDENSIIFAAKS-p Q07890;S521-p LVSKDENSIIFAAKS 0.766827003201842 0.360376815650301 0.0713333333333333 -0.146 2.2078300453235 5.881540394343 0.0713333333333334 -0.146 0.601474189313475 0.258134445400517 0.554350959272853 -1.26313716784803 Q07890 SOS2 Q07890.S521.p_SOS2 Q07890_S521s_1_1_521_521 Q07890 Q07890|Q07890-2 Son of sevenless homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15069.15069.5 7.96 1.8 1.44 6 1 1 0 916.8507 4481.3854 N520n S521s N533n N534n M536m TMT10 518 (K) DEnsIIFAAKSAEEKnnWmAALISLHYRSTLDR (M) DEN(1.0)S(0.99)IIFAAKS(0.0)AEEKN(1.0)N(1.0)WM(1.0)AALIS(0.0)LHY(0.0)RS(0.0)T(0.0)LDR K:TMT10,n:Deamidated,s:Phosphorylated S,m:Oxidized methionine SOS2 154345.7 1 1 5631.1 17.61 HUMAN 1 2.2078 -5.8815 LVSKIAKYPHVEDYR-p P61289-2;Y209-p LVSKIAKYPHVEDYR 0.297461304797153 0.0173655699062675 0.265 0.904 9.90379389388099 24.2686807175781 0.265 0.904 0.102239945806612 0.00374224251354724 1.96500091283936 4.85507893945349 P61289 PSME3 P61289.2.Y209.p_PSME3 P61289-2_Y209y _1_1_209_209 P61289-2 P61289-2|P61289-3 Isoform 2 of Proteasome activator complex subunit 3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.7708.7744.3 11.41 11.41 11.408 2 1 1 0 515.2488 1463.7593 Y209y TMT10 209 (K) yPHVEDYRR (T) Y(0.99)PHVEDY(0.0)RR y:Phosphorylated Y PSME3 31057.2 1 1 311.1 11.41 HUMAN 1 9.9038 24.2687 LVSPVSPSPVQMMKR-p Q9HB20;S201-p LVSPVSPSPVQMMKR 0.701391719781544 0.437008960310466 0.052 0.116666666666667 2.89836971474431 4.78911101901294 0.052 0.116666666666667 0.513053941654315 0.331962401787296 0.699693352254602 1.06505837688536 Q9HB20 PLEKHA3 Q9HB20.S201.p_PLEKHA3 Q9HB20_S201s _1_1_201_201 Q9HB20 Q9HB20 Pleckstrin homology domain-containing family A member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26542.26542.5 22.2 22.28 1.185 3 1 1 0 775.0075 3791.0454 S201s TMT10 181 (K) FKPEMFQLHHPDPLVSPVSPsPVQMMK (R) FKPEMFQLHHPDPLVS(0.0)PVS(0.0)PS(0.99)PVQMMK K:TMT10,s:Phosphorylated S PLEKHA3 34374.1 2 1 3895.1 41.2 HUMAN 1 2.8984 4.7891 LVSRPGPTPPGAKAS-p Q9Y6I3-1;T580-p LVSRPGPTPPGAKAS 0.936107507392066 0.144125356088096 -0.012 -0.204666666666667 0.560474168434412 11.0811877147648 -0.012 -0.204666666666667 0.878926549233973 0.0779616870628436 -0.159677085435289 -2.16935250368933 Q9Y6I3 EPN1 Q9Y6I3.1.T580.p_EPN1 Q9Y6I3-1_T580t _1_1_580_580 Q9Y6I3-1 Q9Y6I3-1|Q9Y6I3-3 Isoform 2 of Epsin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31111.31111.5 22.82 20.98 2.309 5 1 1 0 780.6316 3819.1623 T580t TMT10 555 (R) KTPESFLGPNAALVDLDSLVSRPGPtPPGAK (A) KT(0.0)PES(0.0)FLGPNAALVDLDS(0.0)LVS(0.0)RPGPT(0.99)PPGAK K:TMT10,t:Phosphorylated T EPN1 69266.5 6 7 856.1 210.87 HUMAN 1 -0.5605 -11.0812 LVSSGSGTMGAAKVT-p O75955;T387-p LVSSGSGTMGAAKVT 0.309800951194774 0.523598444072665 -0.207666666666667 -0.0673333333333333 9.51838371902531 3.77533347858084 -0.207666666666667 -0.0673333333333333 0.111727897969586 0.419243803276168 -1.8981444566813 -0.873791192428447 O75955 FLOT1 O75955.T387.p_FLOT1 O75955_T387t _1_1_387_387 O75955 O75955|O75955-2 Flotillin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20105.20105.3 11.37 11.37 1.116 5 1 1 0 640.0097 1838.0458 T387t TMT10 378 (K) ITLVSSGSGtMGAAK (V) IT(0.0)LVS(0.0)S(0.0)GS(0.0)GT(0.99)MGAAK K:TMT10,t:Phosphorylated T FLOT1 47582.7 9 3 2431.1 83.61 HUMAN 1 -9.5184 -3.7753 LVSVMRLSDLSTEDD-p Q5BJF6-4;S101-p LVSVMRLSDLSTEDD 0.260407038253762 0.103638878616272 0.168333333333333 0.238333333333333 11.0714002008901 13.0034336712932 0.168333333333333 0.238333333333333 0.0781375842018059 0.0500791135550183 2.16862278876829 2.51030792694646 Q5BJF6 ODF2 Q5BJF6.4.S101.p_ODF2 Q5BJF6-4_S101sS104sT105t_3_3_101_105 Q5BJF6-4 Q5BJF6-4|Q5BJF6-3|Q5BJF6-2|Q5BJF6-7|Q5BJF6-6|Q5BJF6-10 Isoform 4 of Outer dense fiber protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24813.24813.4 13.52 13.52 1.204 5 3 3 0 766.3325 2822.4065 S101s S104s T105t TMT10 94 (K) LVSVMRLsDLstEDDDSGHCK (M) LVS(0.0)VMRLS(0.99)DLS(0.99)T(0.99)EDDDS(0.0)GHCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T ODF2 96031.2 1 16 853.1 211.96 HUMAN 1 11.0714 13.0034 LVTGGVISGIGKGII-p Q9NRF8;S12-p LVTGGVISGIGKGII 0.924305950904693 0.0799587703347656 -0.0203333333333333 0.251666666666667 0.673398576943656 14.5591357406952 -0.0203333333333333 0.251666666666667 0.856367431534798 0.03500148141169 -0.189820297331441 2.79441027907644 Q9NRF8 CTPS2 Q9NRF8.S12.p_CTPS2 Q9NRF8_S12s _1_1_12_12 Q9NRF8 P17812|Q9NRF8 CTP synthase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30142.30142.3 18.99 18.99 9.019 3 1 1 0 639.042 1835.1406 S12s TMT10 3 (K) YILVTGGVIsGIGK (G) Y(0.0)ILVT(0.0)GGVIS(0.99)GIGK K:TMT10,s:Phosphorylated S CTPS2 66361 2 5 2509.2 80.59 HUMAN 1 -0.6734 14.5591 LVTNKQHSPIQVPMV-p Q8N9N5;S90-p LVTNKQHSPIQVPMV 0.361563717703528 0.762823610259615 -0.125 0.0356666666666667 8.21050856646947 1.62552877554416 -0.125 0.0356666666666667 0.1509903331478 0.687776166976343 -1.67165979591279 0.424131399150668 Q8N9N5 BANP Q8N9N5.S90.p_BANP Q8N9N5_S90s _1_1_90_90 Q8N9N5 Q8N9N5|Q8N9N5-7|Q8N9N5-5|Q8N9N5-4|Q8N9N5-2|Q8N9N5-6|Q8N9N5-3|E9PJI6 Protein BANP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20901.20901.4 22.03 23.89 14.617 4 1 1 0 740.6289 2879.5272 S90s TMT10 88 (K) QHsPIQVPMVAGSPLGATQTCNK (V) Q(0.0)HS(0.99)PIQVPM(0.0)VAGS(0.0)PLGAT(0.0)QT(0.0)CN(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BANP 57178.1 7 2 3183.1 58.32 HUMAN 1 -8.2105 1.6255 LVTQGRESPEGSYTD-p S4R347;S501-p LVTQGRESPEGSYTD 0.0447859715508879 0.142976423871544 0.480333333333333 0.151333333333333 29.9121523080583 11.13100901604 0.480333333333333 0.151333333333333 0.00102043364447568 0.0770724382374675 6.40544017691186 2.17808156336558 S4R347 NotFound S4R347.S501.p_NotFound S4R347_S501s _1_1_501_501 S4R347 S4R347|Q5T0N5|Q5T0N5-5|Q5T0N5-2|Q5T0N5-4|Q5T0N5-3 Formin-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10270.10270.3 17.94 17.94 2.527 7 1 1 0 1184.2051 3470.637 S501s TMT10 487 (R) HSSDINHLVTQGREsPEGSYTDDANQEVR (G) HS(0.0)S(0.0)DINHLVT(0.0)QGRES(0.99)PEGS(0.0)Y(0.0)T(0.0)DDANQEVR s:Phosphorylated S FNBP1L 70981.3 5 5 1067.1 181.01 HUMAN 1 29.9122 11.131 LVVSRNLSPPNCTEL-p P38398;S632-p LVVSRNLSPPNCTEL 0.688548333856034 0.0070442091182109 0.0543333333333333 -0.476666666666667 3.04111675179571 30.8250037107227 0.0543333333333333 -0.476666666666667 0.496464643320778 0.000826988801967329 0.728751271652147 -6.67614603268055 P38398 BRCA1 P38398.S632.p_BRCA1 P38398_S632s _1_1_632_632 P38398 P38398|P38398-4|P38398-8|Q5YLB2 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21645.21645.3 20.91 20.91 2.35 6 1 1 0 1016.1456 2966.4487 S632s TMT10 630 (R) NLsPPNCTELQIDSCSSSEEIK (K) NLS(0.99)PPNCT(0.0)ELQIDS(0.0)CS(0.0)S(0.0)S(0.0)EEIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRCA1 210227.6 6 8 106.1 588.91 HUMAN 1 3.0411 -30.825 LVVVSVKSPNQSLRL-p Q96B01;S327-p LVVVSVKSPNQSLRL 0.727948175722141 0.00206265665551185 0.084 -0.931666666666667 2.61659204724132 41.8038241516043 0.084 -0.931666666666667 0.547445380319002 6.60111934782394e-05 0.641400756329007 -10.9732175824972 Q96B01 RAD51AP1 Q96B01.S327.p_RAD51AP1 Q96B01_S327s _1_1_327_327 Q96B01 Q96B01|Q96B01-2|Q96B01-3 RAD51-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19710.19710.3 20.32 14.49 1.169 7 1 1 0 837.1341 2429.4128 S327s TMT10 315 (R) SSSSPLVVVSVKsPNQSLR (L) S(0.0)S(0.0)S(0.0)S(0.0)PLVVVS(0.0)VKS(0.99)PNQS(0.0)LR K:TMT10,s:Phosphorylated S RAD51AP1 38684.9 2 5 1345.1 151.31 HUMAN 1 2.6166 -41.8038 LVWGTKSSPGLSDTI-p Q9H8M7;S18-p LVWGTKSSPGLSDTI 0.288657613845318 0.0301337338809123 -0.174333333333333 0.279666666666667 10.1747980205072 20.5775592381805 -0.171145497893578 0.279666666666667 0.096055049014689 0.00875475659722974 -2.0120958779865 4.00012998182252 Q9H8M7 FAM188A Q9H8M7.S18.p_FAM188A Q9H8M7_S18s _1_1_18_18 Q9H8M7 Q9H8M7|Q9H8M7-2 Ubiquitin carboxyl-terminal hydrolase MINDY-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20123.20123.2 7.33 2.52 1.247 4 1 1 0 824.8829 1568.794 S18s TMT10 17 (K) SsPGLSDTIFCR (W) S(0.0)S(0.99)PGLS(0.0)DT(0.0)IFCR C:Carbamidomethylation,s:Phosphorylated S MINDY3 50408.3 2 1 7195.1 7.33 HUMAN 1 -10.1748 20.5776 LWASEPGTPPLPTSL-p Q9BXP5;T544-p LWASEPGTPPLPTSL 0.436564594739479 0.0464087076757773 0.114333333333333 0.236333333333333 6.62683536698668 17.838455223612 0.114333333333333 0.236333333333333 0.217428496772504 0.0164495672683346 1.39552122539044 3.4268714482619 Q9BXP5 SRRT Q9BXP5.T544.p_SRRT Q9BXP5_T544t _1_1_544_544 Q9BXP5 Q9BXP5|Q9BXP5-3|Q9BXP5-2|Q9BXP5-4|Q9BXP5-5 Serrate RNA effector molecule homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.29931.30131.4 23.44 23.44 3.282 7 1 1 0 1044.3151 4094.269 T544t TMT10 527 (K) LIHTLDDRTQLWASEPGtPPLPTSLPSQNPILK (N) LIHT(0.0)LDDRT(0.0)QLWAS(0.0)EPGT(0.99)PPLPT(0.0)S(0.0)LPS(0.0)QNPILK K:TMT10,t:Phosphorylated T SRRT 101121.1 42 11 321.1 364.45 HUMAN 1 6.6268 17.8385 LWDESDDSNSEIEAA-p Q2M2Z5;S650-p LWDESDDSNSEIEAA 0.471629254333461 0.0504318281101793 -0.119333333333333 0.229 6.02326661401269 17.3351828256031 -0.119333333333333 0.229 0.249846539485656 0.0184706303718167 -1.28870729852095 3.32634891046449 Q2M2Z5 KIZ Q2M2Z5.S650.p_KIZ Q2M2Z5_S650s _1_1_650_650 Q2M2Z5 Q2M2Z5|A0A087X251|Q2M2Z5-2|Q2M2Z5-5 Centrosomal protein kizuna HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22550.22550.3 16.76 16.76 1.306 4 1 1 0 928.7599 2704.3012 S650s TMT10 640 (K) SNALWDESDDsNSEIEAALRPR (N) S(0.0)NALWDES(0.0)DDS(0.99)NS(0.0)EIEAALRPR s:Phosphorylated S KIZ 75794.3 1 5 2276.1 90.11 HUMAN 1 -6.0233 17.3352 LWEEMALSPRQQRRQ-p Q9NWQ4;S31-p LWEEMALSPRQQRRQ 0.217126583342706 0.0147082774333393 -0.281333333333333 0.356 12.7798911544646 25.3785390096823 -0.281333333333333 0.356 0.0527243075345186 0.00289831843384501 -2.47147910670374 5.1337579870604 Q9NWQ4 GPATCH2L Q9NWQ4.S31.p_GPATCH2L Q9NWQ4_S31s _1_1_31_31 Q9NWQ4 Q9NWQ4|Q9NWQ4-4|G3V553|Q9NWQ4-1 G patch domain-containing protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32989.32989.3 17.47 17.47 99 1 1 1 0 613.9677 1759.925 S31s TMT10 21 (K) LGELWEEMALsPR (Q) LGELWEEMALS(1.0)PR s:Phosphorylated S GPATCH2L 55171.4 4 2 2768.1 71.26 HUMAN 1 -12.7799 25.3785 LWERNIKSHLGNVHD-p Q8WW12;S168-p LWERNIKSHLGNVHD 0.137433340794007 0.519815557492808 0.288333333333333 -0.118 17.6497437785336 3.8176618915285 0.288333333333333 -0.118 0.0171800974188551 0.415177501327645 3.39172386298469 -0.881966581256976 Q8WW12 PCNP Q8WW12.S168.p_PCNP Q8WW12_S168s _1_1_168_168 Q8WW12 Q8WW12|Q8WW12-3 PEST proteolytic signal-containing nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9425.9425.3 8.02 8.02 99 1 1 1 0 710.3565 2049.0878 S168s TMT10 165 (R) NIKsHLGNVHDQDN (-) NIKS(1.0)HLGNVHDQDN K:TMT10,s:Phosphorylated S PCNP 18924.5 1 10 1455.1 140.6 HUMAN 1 17.6497 -3.8177 LWESMERSDEENLKE-p Q86UU1;S682-p LWESMERSDEENLKE 0.784516233372349 0.00839507320642349 -0.043 0.474333333333333 2.03015778140039 29.5050426262542 -0.043 0.474333333333333 0.626591099884558 0.00112071642618623 -0.515470386800131 6.2732057467826 Q86UU1 PHLDB1 Q86UU1.S682.p_PHLDB1 Q86UU1_S682s _1_1_682_682 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20287.20287.3 16.94 16.94 3.274 2 1 1 0 768.7038 2224.132 S682s TMT10 675 (R) LWESMERsDEENLK (E) LWES(0.0)MERS(0.99)DEENLK K:TMT10,s:Phosphorylated S PHLDB1 152129.1 2 22 99.1 600.41 HUMAN 1 -2.0302 29.505 LWLRRELSPPRPRLL-p Q99956;S16-p LWLRRELSPPRPRLL 0.583889052784785 0.0977633637547933 -0.0813333333333333 -0.234666666666667 4.2999529314698 13.3521946189802 -0.0813333333333333 -0.234666666666667 0.37153925579165 0.0462147425565232 -0.97404897144641 -2.57327059674972 Q99956 DUSP9 Q99956.S16.p_DUSP9 Q99956_S16s _1_1_16_16 Q99956 Q99956 Dual specificity protein phosphatase 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7885.7885.3 7.43 7.43 99 1 1 1 0 420.8937 1180.7 S16s TMT10 14 (R) ELsPPRPR (L) ELS(1.0)PPRPR s:Phosphorylated S DUSP9 42380.3 1 3 3410.2 51.75 HUMAN 1 -4.3 -13.3522 LWRSLSESWEVINSK-p Q9H6L5;S153-p LWRSLSESWEVINSK 0.322180248290878 0.0103448230134682 0.156333333333333 -0.561333333333333 9.20916495371501 27.871443039008 0.156333333333333 -0.561333333333333 0.119972996086679 0.00163250942057811 1.84457653262331 -5.80140572041668 Q9H6L5 FAM134B Q9H6L5.S153.p_FAM134B Q9H6L5_S153s _1_1_153_153 Q9H6L5 Q9H6L5 Reticulophagy regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16342.16342.4 14.89 14.89 1.228 4 1 1 0 667.5948 2587.388 S153s TMT10 149 (R) SLSEsWEVINSKPDERPR (L) S(0.0)LS(0.0)ES(0.99)WEVINS(0.0)KPDERPR K:TMT10,s:Phosphorylated S RETREG1 55250.1 2 2 3380.1 52.45 HUMAN 1 9.2092 -27.8714 LYANTVLSGGTTMYP-p P63261;S300-p LYANTVLSGGTTMYP 0.602006619094351 0.297318047756712 0.0726666666666667 0.113333333333333 4.07174102574694 6.95326820526425 0.0726666666666667 0.113333333333333 0.391584864750453 0.201684804962104 0.930818350955626 1.45243196484022 P63261 ACTG1 P63261.S300.p_ACTG1 P63261_S300s _1_1_300_300 P63261 P60709|P63261 Actin, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25886.25886.3 19.83 19.6 1.122 6 1 1 0 842.0713 2444.2329 S300s TMT10 292 (K) DLYANTVLsGGTTMYPGIADR (M) DLY(0.0)ANT(0.0)VLS(0.99)GGT(0.0)T(0.0)MY(0.0)PGIADR s:Phosphorylated S ACTG1 42134.4 2 16 1233.1 163.71 HUMAN 1 4.0717 6.9533 LYCNTRRSVEAPTER-p Q9NWZ8;S185-p LYCNTRRSVEAPTER 0.933081930768236 0.951627785467761 0.027 0.0166666666666667 0.590393488263531 0.307455638831737 0.027 0.0166666666666666 0.87289227725497 0.931653534906325 0.167721938760972 0.0898218421402824 Q9NWZ8 GEMIN8 Q9NWZ8.S185.p_GEMIN8 Q9NWZ8_S185s _1_1_185_185 Q9NWZ8 Q9NWZ8 Gem-associated protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6335.6335.3 14.98 6.53 6.269 2 1 1 0 546.2688 1556.823 S185s TMT10 185 (R) sVEAPTERPGER (R) S(0.99)VEAPT(0.0)ERPGER s:Phosphorylated S GEMIN8 28921.4 5 3 2387.1 85.57 HUMAN 1 0.5904 0.3075 LYDATYETKESKKED-p P23528;T91-p LYDATYETKESKKED 0.119734359453001 0.0602671494991098 -0.573666666666667 0.276333333333333 19.1782597347131 16.2517728345028 -0.573666666666667 0.276333333333333 0.0120829791624631 0.0237040588420694 -3.70477315842306 3.11444007156826 P23528 CFL1 P23528.T91.p_CFL1 P23528_T91t _1_1_91_91 P23528 E9PK25|P23528|Q9Y281|G3V1A4|Q9Y281-3 Cofilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19112.19112.3 12.25 12.25 1.733 5 1 1 0 625.9777 1795.9518 T91t TMT10 82 (R) YALYDATYEtK (E) Y(0.0)ALY(0.0)DAT(0.0)Y(0.0)ET(0.99)K K:TMT10,t:Phosphorylated T CFL1 18730.4 1 6 681.1 245.42 HUMAN 1 -19.1783 16.2518 LYDNRRRSAQWLDQE-p Q53H47;S508-p LYDNRRRSAQWLDQE 0.20055874973276 0.0873532151274014 -0.321666666666667 -0.367333333333333 13.5682010314983 14.0171167386559 -0.321666666666667 -0.367333333333333 0.0439723723511114 0.0396541208793414 -2.61397551543481 -2.69444296081747 Q53H47 SETMAR Q53H47.S508.p_SETMAR Q53H47_S508s _1_1_508_508 Q53H47 Q53H47|Q53H47-3 Histone-lysine N-methyltransferase SETMAR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18340.18340.3 16.38 13.8 99 1 1 1 0 647.3246 1859.9903 S508s TMT10 508 (R) sAQWLDQEEAPK (H) S(1.0)AQWLDQEEAPK K:TMT10,s:Phosphorylated S SETMAR 79458.8 1 1 5777.1 16.38 HUMAN 1 -13.5682 -14.0171 LYDSEGLSGEERGGK-p Q9H7N4;S738-p LYDSEGLSGEERGGK 0.681659995508636 0.150977171384263 0.0583333333333333 -0.163 3.12164313296577 10.796740935384 0.0583333333333333 -0.163 0.487344070856771 0.0832388183652554 0.74501292702035 -2.11960161502188 Q9H7N4 SCAF1 Q9H7N4.S738.p_SCAF1 Q9H7N4_S734sS738s_2_2_734_738 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18093.18093.3 10.94 10.94 5.131 3 2 2 0 657.9459 1811.8861 S734s S738s TMT10 729 (R) EVLYDsEGLsGEER (G) EVLY(0.0)DS(0.99)EGLS(0.99)GEER s:Phosphorylated S SCAF1 139895 2 29 76.1 647.25 HUMAN 1 3.1216 -10.7967 LYDYQEKSPREVTMK-p A0A0D9SGF6;S982-p LYDYQEKSPREVTMK 0.232587423363545 0.436635712399126 -0.407666666666667 0.121 12.1749062450321 4.79448773152014 -0.407666666666667 0.121 0.0606051283747718 0.331551675410315 -2.36339701143219 1.06605073372778 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.S982.p_SPTAN1 A0A0D9SGF6_S982s _1_1_982_982 A0A0D9SGF6 A0A0D9SGF6|Q13813-2|A0A0D9SF54|Q13813-3 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26183.26183.3 16.86 15.69 4.68 3 1 1 0 788.0883 2282.2797 S982s TMT10 970 (K) ELVLALYDYQEKsPR (E) ELVLALY(0.0)DY(0.0)QEKS(0.99)PR K:TMT10,s:Phosphorylated S SPTAN1 288398.5 3 3 263.1 396.39 HUMAN 1 -12.1749 4.7945 LYGPTNFSPIINHVA-p O75131;S398-p LYGPTNFSPIINHVA 0.506609842161293 0.503231737092202 0.101666666666667 -0.0686666666666667 5.4445853458479 3.99460427056025 0.101666666666667 -0.0686666666666667 0.285457504888454 0.398602091309496 1.18494284631918 -0.915943087036957 O75131 CPNE3 O75131.S398.p_CPNE3 O75131_S398s _1_1_398_398 O75131 O75131 Copine-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25488.25488.3 16.65 16.65 2.016 3 1 1 0 703.3689 2028.1228 S398s TMT10 391 (K) LYGPTNFsPIINHVAR (F) LY(0.0)GPT(0.0)NFS(0.99)PIINHVAR s:Phosphorylated S CPNE3 60985.3 1 6 1209.1 166.69 HUMAN 1 5.4446 -3.9946 LYGSAPRTPSKRRGL-p O43663;T470-p LYGSAPRTPSKRRGL 0.735087497150733 0.00203605351766751 0.114333333333333 -1.09933333333333 2.53116625477318 41.9624440314423 0.114333333333333 -1.09933333333333 0.558320243237863 6.36437259291005e-05 0.623465037685849 -11.0502496089419 O43663 PRC1 O43663.T470.p_PRC1 O43663_T470t _1_1_470_470 O43663 O43663|O43663-4|O43663-2|O43663-3 Protein regulator of cytokinesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13721.13721.4 17.06 17.06 1.141 6 1 1 0 609.3076 2354.2426 T470t TMT10 457 (K) QTETEMLYGSAPRtPSK (R) QT(0.0)ET(0.0)EMLY(0.0)GS(0.0)APRT(0.99)PS(0.0)K K:TMT10,t:Phosphorylated T PRC1 72290 5 4 715.1 238.03 HUMAN 1 2.5312 -41.9624 LYKEKALSVETEKLL-p P10155;S219-p LYKEKALSVETEKLL 0.788756991728145 0.675055290843456 0.0493333333333333 -0.0443333333333333 1.98679979175699 2.3324950685253 0.0493333333333333 -0.0443333333333333 0.632878031709974 0.584454212439438 0.505876771386463 -0.581166502816304 P10155 TROVE2 P10155.S219.p_TROVE2 P10155_S219s _1_1_219_219 P10155 P10155|P10155-4|P10155-5 60 kDa SS-A/Ro ribonucleoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13563.13563.2 10.42 5.92 2.824 2 1 1 0 707.8829 1334.7932 S219s TMT10 217 (K) ALsVETEK (L) ALS(0.99)VET(0.0)EK K:TMT10,s:Phosphorylated S TROVE2 61411.3 1 2 4421.1 31.7 HUMAN 1 1.9868 -2.3325 LYKKQEGTPEGLYL_-p P62191;T434-p LYKKQEGTPEGLYL_ 0.275294038676077 0.501290590822245 -0.170333333333333 0.0643333333333334 10.602962605911 4.01435631791763 -0.170333333333333 0.063889126755663 0.0870369651491633 0.396793334613971 -2.08668861762394 0.919716646634035 P62191 PSMC1 P62191.T434.p_PSMC1 P62191_T434t _1_1_434_434 P62191 P62191|P62191-2 26S proteasome regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19828.19828.2 11.81 11.81 1.68 2 1 1 0 886.9667 1692.9573 T434t TMT10 430 (K) KQEGtPEGLYL (-) KQEGT(0.99)PEGLY(0.0)L K:TMT10,t:Phosphorylated T PSMC1 49354.8 5 3 3477.1 50.1 HUMAN 1 -10.603 4.0144 LYKMNYATRIVTLEE-p Q9NR09;T834-p LYKMNYATRIVTLEE 0.13430679397205 0.0442889621257708 0.264 0.264 17.8883487362184 18.1249374010477 0.264 0.264 0.0162616693540828 0.0153994872263022 3.4397044093134 3.48471661632223 Q9NR09 BIRC6 Q9NR09.T834.p_BIRC6 Q9NR09_T834t_1_1_834_834 Q9NR09 Q9NR09 Baculoviral IAP repeat-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3751.3751.3 8.63 1 2.863 5 1 1 0 759.0338 2178.1579 N819n M830m T834t Hydrogen 819 (R) nVSGGYLVLYKmNYAtR (I) N(0.99)VS(0.0)GGY(0.0)LVLY(0.0)KM(1.0)N(0.0)Y(0.0)AT(0.99)R K:TMT10-Lys-Only,n:Deamidated,m:Oxidized methionine,t:Phosphorylated T BIRC6 536521.4 1 4 1201.1 166.97 HUMAN 1 17.8883 18.1249 LYKRGRRTPPVQPPP-p Q9Y6R9;T285-p LYKRGRRTPPVQPPP 0.0608497647854506 0.0453960353890061 0.527333333333333 -0.276666666666667 26.5658253693277 17.9733467231157 0.527333333333333 -0.276666666666667 0.00220504503148498 0.0159464981818049 5.45160003214857 -3.45405073240147 Q9Y6R9 CCDC61 Q9Y6R9.T285.p_CCDC61 Q9Y6R9_T285t _1_1_285_285 Q9Y6R9 Q9Y6R9 Coiled-coil domain-containing protein 61 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4852.4852.3 14.44 14.44 14.439 2 1 1 0 523.9202 1489.7758 T285t Hydrogen 285 (R) tPPVQPPPTREDR (A) T(0.99)PPVQPPPT(0.0)REDR t:Phosphorylated T CCDC61 57595.5 5 1 2443.1 83.27 HUMAN 1 26.5658 -17.9733 LYLGSRASLADALPL-p Q8ND25;S123-p LYLGSRASLADALPL 0.643273789852979 0.817598851402086 -0.077 -0.0256666666666667 3.58159709836861 1.22320523093014 -0.077 -0.0256666666666667 0.438369459737943 0.754535151263371 -0.836255995483418 -0.328933121449109 Q8ND25 ZNRF1 Q8ND25.S123.p_ZNRF1 Q8ND25_S123s _1_1_123_123 Q8ND25 Q8ND25-2|H3BRB6 E3 ubiquitin-protein ligase ZNRF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28031.28031.4 21.11 21.11 2.157 3 1 1 0 687.3637 2666.465 S123s TMT10 113 (R) DGMLYLGSRAsLADALPLHIAPR (W) DGMLY(0.0)LGS(0.0)RAS(0.99)LADALPLHIAPR s:Phosphorylated S ZNRF1 24295.7 2 2 2742.1 72.13 HUMAN 1 -3.5816 -1.2232 LYPANKKSPNGKLRL-p P09467;S271-p LYPANKKSPNGKLRL 0.98707147388065 0.231570502048241 0.00333333333333333 0.143 0.114731279376655 8.36845484052712 0.00333333333333334 0.143 0.973928045466794 0.145597700484616 0.0342206750240192 1.69846042250861 P09467 FBP1 P09467.S271.p_FBP1 P09467_S271s _1_1_271_271 P09467 P09467 Fructose-1,6-bisphosphatase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25070.25070.4 17.88 17.88 3.334 4 1 1 0 791.7101 3083.8427 S271s TMT10 256 (R) TLVYGGIFLYPANKKsPNGK (L) T(0.0)LVY(0.0)GGIFLY(0.0)PANKKS(0.99)PNGK K:TMT10,s:Phosphorylated S FBP1 37241.2 1 2 3973.1 39.97 HUMAN 1 0.1147 8.3685 LYPEEFETDSDQQDI-p Q6ZUT1;T123-p LYPEEFETDSDQQDI 0.982842045127411 0.0831776836997244 0.00333333333333332 0.247 0.148484101303213 14.2975052522919 0.00333333333333332 0.247 0.966388136527909 0.0371748713948999 0.0441239193553862 2.74601653244747 Q6ZUT1 C11orf57 Q6ZUT1.T123.p_C11orf57 Q6ZUT1_T123tS125s_2_2_123_125 Q6ZUT1 Q6ZUT1 Uncharacterized protein NKAPD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21369.21369.5 19.66 19.66 6.84 4 2 2 0 667.5143 3173.6093 T123t S125s TMT10 115 (K) ELYPEEFEtDsDQQDITNGKK (T) ELY(0.0)PEEFET(0.99)DS(0.99)DQQDIT(0.0)NGKK K:TMT10,t:Phosphorylated T,s:Phosphorylated S NKAPD1 34109.2 4 1 1271.2 159.85 HUMAN 1 0.1485 14.2975 LYPPSVLSKSRTSFV-p Q96GE4;S229-p LYPPSVLSKSRTSFV 0.538254677344084 0.609784297999937 0.105333333333333 0.061 4.97286240480016 2.91886501027945 0.105333333333333 0.061 0.318209953069219 0.510638433318644 1.0990826304683 0.703786877620496 Q96GE4 CEP95 Q96GE4.S229.p_CEP95 Q96GE4_S226sS229s_2_2_226_229 Q96GE4 Q96GE4|A0A0A0MTQ1|Q96GE4-2 Centrosomal protein of 95 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22596.22596.3 13.29 13.71 2.234 4 2 2 0 741.0187 2061.1091 S226s S229s TMT10 217 (K) SHEDMLYPPsVLsK (S) S(0.0)HEDMLY(0.0)PPS(0.99)VLS(0.99)K K:TMT10,s:Phosphorylated S CEP95 95922.6 1 8 2407.1 84.85 HUMAN 1 4.9729 2.9189 LYQCKNFTPPPRRAD-p Q9Y219;T1155-p LYQCKNFTPPPRRAD 0.560135693219576 0.0488635749310473 0.0806666666666667 -0.269333333333333 4.64058115277702 17.5358111360221 0.0806666666666667 -0.269333333333333 0.343511977641067 0.0176367633017176 1.03776080182153 -3.36625732068718 Q9Y219 JAG2 Q9Y219.T1155.p_JAG2 Q9Y219_T1155t _1_1_1155_1155 Q9Y219 Q9Y219|Q9Y219-2 Protein jagged-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6392.6392.3 12.06 9.62 99 1 1 1 0 431.8932 1213.7003 T1155t TMT10 1153 (K) NFtPPPRR (A) NFT(1.0)PPPRR t:Phosphorylated T JAG2 140781.4 7 1 3991.1 39.51 HUMAN 1 4.6406 -17.5358 LYRLKFMSSPSLSDL-p P85299-5;S34-p LYRLKFMSSPSLSDL 0.422807784151987 0.0714803037615717 -0.120333333333333 -0.237333333333333 6.8864018421807 15.2317495398743 -0.120333333333333 -0.24080859655864 0.204814083187472 0.029979545603609 -1.44111343726293 -2.92008836111509 P85299 PRR5 P85299.5.S34.p_PRR5 P85299-5_S34s _1_1_34_34 P85299-5 B1AHC4|B1AHC3|P85299-5|F8WEZ7 Isoform 5 of Proline-rich protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26463.26463.2 12.12 12.12 1.146 4 1 1 0 903.9584 1726.945 S34s TMT10 32 (K) FMsSPSLSDLGK (R) FMS(0.99)S(0.0)PS(0.0)LS(0.0)DLGK K:TMT10,s:Phosphorylated S PRR5 45456.6 2 2 2028.1 101.7 HUMAN 1 -6.8864 -15.2317 LYRRTLDSDEERPRP-p Q9BW71;S530-p LYRRTLDSDEERPRP 0.535980313174196 0.390742774671189 0.09 0.085 5.01365775650366 5.42592429005938 0.09 0.085 0.315234850390733 0.28668671677777 1.10656038076317 1.1813136452144 Q9BW71 HIRIP3 Q9BW71.S530.p_HIRIP3 Q9BW71_S530s _1_1_530_530 Q9BW71 Q9BW71|Q9BW71-2 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9869.9930.5 25.98 21.76 1.477 3 1 1 0 572.2744 2777.3739 S530s TMT10 526 (R) RTLDsDEERPRPAPPDWSHMR (G) RT(0.0)LDS(0.99)DEERPRPAPPDWS(0.0)HMR s:Phosphorylated S HIRIP3 62298.3 19 16 178.1 481.23 HUMAN 1 5.0137 5.4259 LYRTGEPSPPHDILH-p Q15311;S48-p LYRTGEPSPPHDILH 0.67357272922705 0.242908974870018 -0.0693333333333333 0.127 3.21650045608132 8.09708916550512 -0.0693333333333334 0.127 0.476815049501106 0.154985505255922 -0.764053167268493 1.6514687429925 Q15311 RALBP1 Q15311.S48.p_RALBP1 Q15311_S48sS62s_2_2_48_62 Q15311 Q15311|A0A1W2PRI7 RalA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15604.15604.5 20.63 14.13 1.202 3 2 2 0 759.7656 3634.8592 S48s S62s TMT10 44 (R) TGEPsPPHDILHEPPDVVsDDEKDHGK (K) T(0.0)GEPS(0.99)PPHDILHEPPDVVS(0.99)DDEKDHGK K:TMT10,s:Phosphorylated S RALBP1 76461.4 7 10 822.1 218.43 HUMAN 1 -3.2165 8.0971 LYSFFPKSPALSDAN-p P52701;S14-p LYSFFPKSPALSDAN 0.490426692750907 0.200137411683993 -0.094 -0.134 5.70300405303392 9.19269160805044 -0.094 -0.134 0.268967368943782 0.120428933186518 -1.23147013332112 -1.84104612157881 P52701 MSH6 P52701.S14.p_MSH6 P52701_S14s _1_1_14_14 P52701 P52701|P52701-3|P52701-2|A0A087WWJ1|F8WAX8|F8W7G9 DNA mismatch repair protein Msh6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26267.26267.4 18.29 18.29 3.433 6 1 1 0 717.8839 2788.5488 S14s TMT10 4 (R) QSTLYSFFPKsPALSDANK (A) QS(0.0)T(0.0)LY(0.0)S(0.0)FFPKS(0.99)PALS(0.0)DANK K:TMT10,s:Phosphorylated S MSH6 154608.6 6 2 875.1 209.27 HUMAN 1 -5.703 -9.1927 LYSFFSPSPARKRHA-p P13051;S14-p LYSFFSPSPARKRHA 0.134796267289591 0.00159168462790637 -0.353666666666667 -1.37133333333333 17.8515054638194 44.9460885135046 -0.353666666666667 -1.37133333333333 0.0164002116811311 3.20177750215011e-05 -3.43227500981174 -12.5965516910722 P13051 UNG P13051.S14.p_UNG P13051_S14s _1_1_14_14 P13051 P13051 Uracil-DNA glycosylase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24755.24755.3 9.93 9.93 1.263 5 1 1 0 680.3643 1959.1104 S14s TMT10 6 (K) TLYSFFSPsPARK (R) T(0.0)LY(0.0)S(0.0)FFS(0.0)PS(0.99)PARK K:TMT10,s:Phosphorylated S UNG 34816 1 2 1324.1 154.1 HUMAN 1 -17.8515 -44.9461 LYSGRPNSGSREDSK-p A0A087X1R1;S193-p LYSGRPNSGSREDSK 0.532184044857255 0.023914889486267 -0.134333333333333 -0.574333333333333 5.06897215334959 22.1030651511997 -0.134333333333333 -0.574333333333333 0.311245287552793 0.00616159976734276 -1.11668273118933 -4.34091940812989 A0A087X1R1 SMTN A0A087X1R1.S193.p_SMTN A0A087X1R1_S193s _1_1_193_193 A0A087X1R1 A0A087X1R1 Smoothelin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5399.5399.3 13.49 8.59 1.139 4 1 1 0 501.5818 1422.7651 S193s TMT10 186 (R) LYSGRPNsGSR (E) LY(0.0)S(0.0)GRPNS(0.99)GS(0.0)R s:Phosphorylated S SMTN 108527.2 1 2 826.1 217.61 HUMAN 1 -5.069 -22.1031 LYTSEISSPIDISGQ-p Q96Q89-2;S1820-p LYTSEISSPIDISGQ 0.259441883712572 0.0413575526910604 -0.173 -0.353 11.1189042669529 18.5467832428547 -0.173 -0.353 0.0772875558438017 0.0139740301426909 -2.17695355681615 -3.57074556744753 Q96Q89 KIF20B Q96Q89.2.S1820.p_KIF20B Q96Q89-2_S1820s _1_1_1820_1820 Q96Q89-2 Q96Q89-2|Q96Q89-3|Q96Q89-5 Isoform 2 of Kinesin-like protein KIF20B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33923.33923.3 12.94 12.94 1.156 6 1 1 0 992.5215 2895.5789 S1820s TMT10 1813 (K) LYTSEISsPIDISGQVILMDQK (M) LY(0.0)T(0.0)S(0.0)EIS(0.0)S(0.99)PIDIS(0.0)GQVILMDQK K:TMT10,s:Phosphorylated S KIF20B 215641.1 2 17 486.1 295.59 HUMAN 1 -11.1189 -18.5468 LYYSQDDSNRKNFDA-p Q99569;S1121-p LYYSQDDSNRKNFDA 0.633407008909186 0.128760791839028 0.0656666666666667 -0.207333333333333 3.69163314929496 11.738683625507 0.0656666666666667 -0.207333333333333 0.427402132842517 0.0670087686523384 0.857706109306525 -2.28495730015918 Q99569 PKP4 Q99569.S1121.p_PKP4 Q99569_S1121s _1_1_1121_1121 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9637.9637.3 18.52 18.52 1.128 4 1 1 0 854.4168 2481.2887 S1121s TMT10 1109 (R) LQHQQLYYSQDDsNRK (N) LQHQQLY(0.0)Y(0.0)S(0.0)QDDS(0.99)NRK K:TMT10,s:Phosphorylated S PKP4 132664.7 1 29 122.1 546.31 HUMAN 1 3.6916 -11.7387 MAADRSESPSLTQER-p Q9BXW9;S592-p MAADRSESPSLTQER 0.410159701806567 0.0417000481439486 0.120666666666667 0.254 7.13683686285773 18.4938824789817 0.120666666666667 0.254 0.193337595791644 0.0141452866295445 1.48494516813166 3.55990065557939 Q9BXW9 FANCD2 Q9BXW9.S592.p_FANCD2 Q9BXW9_S592s _1_1_592_592 Q9BXW9 Q9BXW9|Q9BXW9-3|Q9BXW9-1 Fanconi anemia group D2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37486.37486.3 20.82 17.86 1.186 5 1 1 0 1066.2135 3116.6645 S592s TMT10 572 (K) LIGIIGAVTMAGIMAADRSEsPSLTQER (A) LIGIIGAVT(0.0)MAGIMAADRS(0.0)ES(0.99)PS(0.0)LT(0.0)QER s:Phosphorylated S FANCD2 165894.1 9 4 960.1 194.41 HUMAN 1 7.1368 18.4939 MAAGAAPSPGPGPGP-p A0A0D9SGJ8;S327-p MAAGAAPSPGPGPGP 0.527344543785721 0.0383760722253743 0.099 0.271333333333333 5.14095468213371 19.0219206138599 0.099 0.271333333333333 0.306129041558083 0.0125258711121304 1.12982715465538 3.66889601120671 A0A0D9SGJ8 NotFound A0A0D9SGJ8.S327.p_NotFound A0A0D9SGJ8_S327s _1_1_327_327 A0A0D9SGJ8 A0A0D9SGJ8|Q2TAK8-3|J3KNX4|Q2TAK8-2 PWWP domain-containing protein MUM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19917.19917.3 12.19 12.19 12.187 2 1 1 0 1063.2023 3107.6258 S327s TMT10 306 (R) LDGSQRPPAVQLEPMAAGAAPsPGPGPGPR (E) LDGS(0.0)QRPPAVQLEPMAAGAAPS(0.99)PGPGPGPR s:Phosphorylated S MUM1 82198.8 2 2 2892.1 66.68 HUMAN 1 5.141 19.0219 MAAGLPLSPRGLGDS-p Q5VWQ8;S842-p MAAGLPLSPRGLGDS 0.880959558381171 0.899748803351736 0.022 -0.0136666666666666 1.08155403902459 0.642497470344154 0.022 -0.0136666666666666 0.779551113281626 0.86248242271075 0.294212124080651 -0.181613637581124 Q5VWQ8 DAB2IP Q5VWQ8.S842.p_DAB2IP Q5VWQ8_S842s_1_1_842_842 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33785.33785.4 22.77 22.77 8.186 8 1 1 0 1146.8398 4503.3656 N830n S842s TMT10 803 (R) AGQTPTTPGTSEGAPGRPQLLAPLSFQnPVYQMAAGLPLsPR (G) AGQT(0.0)PT(0.0)T(0.0)PGT(0.0)S(0.0)EGAPGRPQLLAPLS(0.0)FQN(1.0)PVY(0.0)QMAAGLPLS(0.99)PR n:Deamidated,s:Phosphorylated S DAB2IP 132592.9 3 14 281.1 388.28 HUMAN 1 1.0816 -0.6425 MADLDALSPIHTPQR-p Q6ZVM7;S160-p MADLDALSPIHTPQR 0.527192383862172 0.0594682478414764 0.0883333333333333 -0.257666666666667 5.1455801400975 16.3313793422589 0.0883333333333333 -0.257666666666667 0.30580317206386 0.0232735196096901 1.13067072237575 -3.12981145310537 Q6ZVM7 TOM1L2 Q6ZVM7.S160.p_TOM1L2 Q6ZVM7_S160s _1_1_160_160 Q6ZVM7 Q6ZVM7|Q6ZVM7-5|Q6ZVM7-2 TOM1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.28408.28408.3 20.41 20.41 5.987 2 1 1 0 835.0795 2423.259 S160s TMT10 148 (K) GVEFPMADLDALsPIHTPQR (S) GVEFPMADLDALS(0.99)PIHT(0.0)PQR s:Phosphorylated S TOM1L2 55897.7 4 3 2215.1 93.2 HUMAN 1 5.1456 -16.3314 MADQEQVSPAAIKKT-p P32322-3;S305-p MADQEQVSPAAIKKT 0.791642014210764 0.00228507318754895 0.0423333333333333 -0.722 1.95804610452415 40.7630887689528 0.0423333333333333 -0.722 0.637082080344382 8.38863161964704e-05 0.499490873439574 -10.479973458249 P32322 PYCR1 P32322.3.S305.p_PYCR1 P32322-3_S305s _1_1_305_305 P32322-3 P32322|P32322-2|E2QRB3|P32322-3 Isoform 3 of Pyrroline-5-carboxylate reductase 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18031.18031.4 17.95 17.95 5.757 2 1 1 0 685.8699 2660.4896 S305s TMT10 294 (R) ELQSMADQEQVsPAAIKK (T) ELQS(0.0)MADQEQVS(0.99)PAAIKK K:TMT10,s:Phosphorylated S PYCR1 36208.1 3 3 2360.1 86.54 HUMAN 1 1.958 -40.7631 MAEASEDSPRPSAPD-p Q07864;S1204-p MAEASEDSPRPSAPD 0.982842045127411 0.56483772569003 0.00433333333333331 -0.0623333333333333 0.148665519149763 3.34456016592496 0.00433333333333329 -0.0623333333333333 0.966347768436626 0.462960547982235 0.0441769533320641 -0.789449792273658 Q07864 POLE Q07864.S1204.p_POLE Q07864_S1204s _1_1_1204_1204 Q07864 Q07864|F5H1D6 DNA polymerase epsilon catalytic subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20465.20465.4 25.2 25.2 2.849 4 1 1 0 876.1736 3421.7132 S1204s TMT10 1193 (R) RQVTMAEASEDsPRPSAPDMEDFGLVK (L) RQVT(0.0)MAEAS(0.0)EDS(0.99)PRPS(0.0)APDMEDFGLVK K:TMT10,s:Phosphorylated S POLE 264194.7 3 2 2193.1 93.83 HUMAN 1 0.1487 -3.3446 MAEDDDDSFP_____-p O43242;S532-p MAEDDDDSFP_____ 0.860957236280481 0.162347346754017 0.0303333333333333 0.217666666666667 1.26973143000644 10.3809487250578 0.0303333333333333 0.217666666666667 0.746494920621521 0.091602036176743 0.340233237890227 2.04711539040933 O43242 PSMD3 O43242.S532.p_PSMD3 O43242_S532s _1_1_532_532 O43242 O43242 26S proteasome non-ATPase regulatory subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.17048.17275.2 10.32 10.32 99 1 1 1 0 790.2899 1499.6045 S532s TMT10 524 (K) EMAEDDDDsFP (-) EMAEDDDDS(1.0)FP s:Phosphorylated S PSMD3 61090.6 2 4 3336.1 53.52 HUMAN 1 1.2697 10.3809 MAFSILNTPKKLGNS-p Q14980;T2055-p MAFSILNTPKKLGNS 0.131009621387088 0.00205530259496525 0.302333333333333 -0.781666666666667 18.2488437899693 41.8416497710656 0.302333333333333 -0.781666666666667 0.0149663404774985 6.54387542146405e-05 3.51280265693616 -10.9915418944869 Q14980 NUMA1 Q14980.T2055.p_NUMA1 Q14980_T2055t _1_1_2055_2055 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24430.24430.3 15.9 10.67 3.012 3 1 1 0 625.6682 1795.0188 T2055t TMT10 2046 (R) QSMAFSILNtPK (K) QS(0.0)MAFS(0.0)ILNT(0.99)PK K:TMT10,t:Phosphorylated T NUMA1 239339.3 7 35 31.1 900.97 HUMAN 1 18.2488 -41.8416 MAGNEALSPTSPFRE-p Q86WR7;S212-p MAGNEALSPTSPFRE 0.0881882914500283 0.00332315329853812 -0.404 -0.685333333333333 22.4785826577515 37.1058266667137 -0.404 -0.685333333333333 0.00565121374971053 0.000194723036511785 -4.43223541183978 -8.90275851990609 Q86WR7 PROSER2 Q86WR7.S212.p_PROSER2 Q86WR7_S212s _1_1_212_212 Q86WR7 Q86WR7|Q86WR7-2 Proline and serine-rich protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19313.19313.3 16.19 16.19 2.895 3 1 1 0 596.2852 1706.8733 S212s TMT10 205 (R) MAGNEALsPTSPFR (E) MAGNEALS(0.99)PT(0.0)S(0.0)PFR s:Phosphorylated S PROSER2 46143.5 4 6 734.1 235.52 HUMAN 1 -22.4786 -37.1058 MALAAPSSPTPESPT-p Q9NQS7;S143-p MALAAPSSPTPESPT 0.861796257771592 0.101911555742109 -0.026 -0.18 1.26362577999603 13.1005492797228 -0.026 -0.18 0.74754513937694 0.0489716877857936 -0.338758767583896 -2.52780149753115 Q9NQS7 INCENP Q9NQS7.S143.p_INCENP Q9NQS7_S142sS143s_2_2_142_143 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30404.30404.4 18.48 18.48 1.142 7 2 2 0 805.152 3057.6365 S142s S143s TMT10 127 (R) AAAAAAAATMALAAPssPTPESPTMLTK (K) AAAAAAAAT(0.0)MALAAPS(0.99)S(0.99)PT(0.0)PES(0.0)PT(0.0)MLT(0.0)K K:TMT10,s:Phosphorylated S INCENP 105826.3 11 25 138.1 524.38 HUMAN 1 -1.2636 -13.1005 MALGKDVTPPPETEV-p E7EVA0;T538-p MALGKDVTPPPETEV 0.612991546937866 0.0112656323144244 0.067 0.459333333333333 3.94211314997264 27.2811608839633 0.067 0.459333333333333 0.403449038694916 0.00187018216747425 0.906048209948616 5.63782033425115 E7EVA0 NotFound E7EVA0.T538.p_NotFound E7EVA0_T538t _1_1_538_538 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.32639.32839.4 19.82 16.15 3.995 5 1 1 0 949.2534 3714.02 T538t TMT10 522 (K) DMSPLSETEMALGKDVtPPPETEVVLIK (N) DMS(0.0)PLS(0.0)ET(0.0)EMALGKDVT(0.99)PPPET(0.0)EVVLIK K:TMT10,t:Phosphorylated T MAP4 246695.2 22 14 38.1 865.62 HUMAN 1 3.9421 27.2812 MALQKKLSQEEYERQ-p Q5JRA6;S1539-p MALQKKLSQEEYERQ 0.55827821703547 0.385304267048845 0.0803333333333333 -0.0983333333333333 4.67427767541175 5.50630012564317 0.0803333333333333 -0.0983333333333333 0.340857011895693 0.281429738689678 1.04401476629256 -1.19582155233816 Q5JRA6 MIA3 Q5JRA6.S1539.p_MIA3 Q5JRA6_S1539s _1_1_1539_1539 Q5JRA6 Q5JRA6|Q5JRA6-2|Q5JRA6-4 Transport and Golgi organization protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7833.7833.3 10.64 10.64 6.727 2 1 1 0 573.9626 1639.9056 S1539s TMT10 1537 (K) KLsQEEYER (Q) KLS(0.99)QEEY(0.0)ER K:TMT10,s:Phosphorylated S MIA3 214383.2 1 6 378.1 336.1 HUMAN 1 4.6743 -5.5063 MALTNVDTPLKGGLN-p Q99459;T377-p MALTNVDTPLKGGLN 0.089386884103539 0.0301337338809123 -0.639333333333333 0.554333333333333 22.3361646424579 20.5770290435726 -0.639333333333334 0.554333333333333 0.00583960586062568 0.00875582545909233 -4.39922782834522 4.00001438424023 Q99459 CDC5L Q99459.T377.p_CDC5L Q99459_T377t _1_1_377_377 Q99459 Q99459 Cell division cycle 5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36421.36421.4 22.59 24.38 1.791 2 1 1 0 663.3619 2570.4628 T377t TMT10 362 (R) ILQEAQNLMALTNVDtPLK (G) ILQEAQNLMALT(0.0)NVDT(0.99)PLK K:TMT10,t:Phosphorylated T CDC5L 92477.2 2 7 751.1 232.35 HUMAN 1 -22.3362 20.577 MAMPRNGSRLDIVHE-p Q00537-2;S92-p MAMPRNGSRLDIVHE 1 0.349582548411958 0 0.098 0 6.05232384224492 -4.00617226329909e-18 0.098 1 0.248180477479695 -3.83793929918416e-17 1.2935690469681 Q00537 CDK17 Q00537.2.S92.p_CDK17 Q00537-2_S92s _1_1_92_92 Q00537-2 Q00537|Q00537-2 Isoform 2 of Cyclin-dependent kinase 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13353.13353.3 12.37 12.37 99 1 1 1 0 678.3695 1953.1282 S92s TMT10 90 (R) NGsRLDIVHENLK (M) NGS(1.0)RLDIVHENLK K:TMT10,s:Phosphorylated S CDK17 59872.4 2 13 672.2 248.68 HUMAN 1 0 6.0523 MANAKQLSSDAEAQK-p Q12888-2;S881-p MANAKQLSSDAEAQK 0.898741459885822 0.200501267663209 -0.0206666666666667 0.13 0.906954048630023 9.183243334461 -0.0206666666666667 0.13 0.811530029940177 0.120691216998915 -0.250373172882831 1.83941144534261 Q12888 TP53BP1 Q12888.2.S881.p_TP53BP1 Q12888-2_S881s _1_1_881_881 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8926.8926.2 13.44 8.92 1.117 2 1 1 0 807.9101 1534.8477 S881s TMT10 879 (K) QLsSDAEAQK (L) QLS(0.99)S(0.0)DAEAQK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 5 40 3.1 2297.07 HUMAN 1 -0.907 9.1832 MANDSDDSISAATNK-p P49959;S561-p MANDSDDSISAATNK 0.570381806910906 0.050454433623152 0.0783333333333333 0.228333333333333 4.48706744151465 17.3295413326155 0.0783333333333333 0.228333333333333 0.355871538482945 0.0184946393437527 1.00916109972386 3.32522983038744 P49959 MRE11A P49959.S561.p_MRE11A P49959_S561s_1_1_561_561 P49959 P49959|F8W7U8|P49959-2|P49959-3 Double-strand break repair protein MRE11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.41169.41169.4 12.63 11.19 1.219 10 1 1 0 1123.5039 4410.0125 N556n S561s TMT10 531 (R) SQSEESASAFSADDLMSIDLAEQMAnDSDDsISAATNK (G) S(0.0)QS(0.0)EES(0.0)AS(0.0)AFS(0.0)ADDLMS(0.0)IDLAEQMAN(0.99)DS(0.0)DDS(0.99)IS(0.0)AAT(0.0)N(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S MRE11 80934.2 58 5 588.1 264.48 HUMAN 1 4.4871 17.3295 MANKANTSGDFEKDD-p P49792;S1993-p MANKANTSGDFEKDD 0.0370606253912864 0.101881364056927 -0.986666666666667 -0.712333333333333 32.7319535916913 13.1033093595159 -0.986666666666667 -0.712333333333333 0.0005330950388108 0.0489405746057864 -7.30835678401001 -2.5282991073304 P49792 RANBP2 P49792.S1993.p_RANBP2 P49792_S1993s _1_1_1993_1993 P49792 P49792|Q99666|O14715|J3KNE0|A6NKT7|Q7Z3J3|A0A286YES2|F8VYC4|P0DJD1|A0A1W2PNU4|P0DJD0|J3KQ37 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10458.10458.2 10.94 10.94 1.332 2 1 1 0 753.8656 1426.7578 S1993s TMT10 1990 (K) ANTsGDFEK (D) ANT(0.0)S(0.99)GDFEK K:TMT10,s:Phosphorylated S RANBP2 362585.9 3 40 9.1 1298.62 HUMAN 1 -32.732 -13.1033 MAPGAVCSPGESKEL-p Q9C0C2;S1297-p MAPGAVCSPGESKEL 0.404207161071059 0.00455061128120994 -0.121 -0.581333333333333 7.26560634386617 34.3381507637801 -0.121 -0.581333333333333 0.18768923561884 0.000368285757210977 -1.50743077444671 -7.85371457994995 Q9C0C2 TNKS1BP1 Q9C0C2.S1297.p_TNKS1BP1 Q9C0C2_S1297s _1_1_1297_1297 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11533.11745.3 15.59 15.59 5.672 2 1 1 0 648.3114 1862.9505 S1297s TMT10 1289 (R) NMAPGAVCsPGESK (E) NMAPGAVCS(0.99)PGES(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 8 56 4.1 2105.7 HUMAN 1 -7.2656 -34.3382 MARQTVVSDTELSIV-p Q9BZH6;S645-p MARQTVVSDTELSIV 0.800917646961064 0.0312577537776141 -0.04 0.275 1.85611226901533 20.3293211355622 -0.04 0.275 0.652211981983523 0.00926974711470632 -0.476695907750293 3.94621488941913 Q9BZH6 WDR11 Q9BZH6.S645.p_WDR11 Q9BZH6_S645s _1_1_645_645 Q9BZH6 Q9BZH6 WD repeat-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.38372.38372.3 24.77 23.81 2.71 8 1 1 0 1110.5845 3249.7718 S645s TMT10 641 (R) QTVVsDTELSIVESSVISLLQEAESK (S) QT(0.0)VVS(0.99)DT(0.0)ELS(0.0)IVES(0.0)S(0.0)VIS(0.0)LLQEAES(0.0)K K:TMT10,s:Phosphorylated S WDR11 138508.1 5 4 1513.1 134.66 HUMAN 1 -1.8561 20.3293 MARYDNGSGYRRGGS-p Q08211;S1171-p MARYDNGSGYRRGGS 0.515061918055108 0.684817211337297 0.104666666666667 0.0556666666666667 5.32019747047583 2.25181013431401 0.104666666666667 0.0556666666666667 0.293751608225005 0.595413923977644 1.16242565408473 0.563803650093651 Q08211 DHX9 Q08211.S1171.p_DHX9 Q08211_S1171s _1_1_1171_1171 Q08211 Q08211|Q08211-2 ATP-dependent RNA helicase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5895.5895.2 8.95 4.67 5.37 3 1 1 0 620.7634 1160.5534 S1171s TMT10 1167 (R) YDNGsGYR (R) Y(0.0)DNGS(0.99)GY(0.0)R s:Phosphorylated S DHX9 142268.2 1 8 1186.1 168.77 HUMAN 1 5.3202 2.2518 MASNIFGTPEENQAS-p Q9UK76;T54-p MASNIFGTPEENQAS 0.0611233751023293 0.0030265033925395 -0.422333333333333 -0.686333333333333 26.4971739294826 37.8518354811507 -0.422333333333333 -0.686333333333333 0.0022401784084671 0.000163989654878956 -5.43323527234659 -9.2058857939111 Q9UK76 HN1 Q9UK76.T54.p_HN1 Q9UK76_T54t _1_1_54_54 Q9UK76 Q9UK76|Q9UK76-3|J3KT51|Q9UK76-2 Jupiter microtubule associated homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25990.25990.3 18.8 18.8 4.603 3 1 1 0 840.4069 2439.2379 T54t TMT10 47 (K) MASNIFGtPEENQASWAK (S) MAS(0.0)NIFGT(0.99)PEENQAS(0.0)WAK K:TMT10,t:Phosphorylated T JPT1 16014.2 12 4 705.1 239.23 HUMAN 1 -26.4972 -37.8518 MASSRNNSVSGLSVK-p Q9UHI6;S500-p MASSRNNSVSGLSVK 0.384747206388685 0.0104377289471877 -0.131 -0.617333333333333 7.67951156863428 27.8101813324928 -0.131 -0.617333333333333 0.170627427516487 0.00165570083097085 -1.57951001854782 -5.78426285619476 Q9UHI6 DDX20 Q9UHI6.S500.p_DDX20 Q9UHI6_S500s _1_1_500_500 Q9UHI6 Q9UHI6|E9PJ60 Probable ATP-dependent RNA helicase DDX20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13977.13977.2 12.33 12.33 2.255 3 1 1 0 771.9182 1462.863 S500s TMT10 498 (R) NNsVSGLSVK (S) NNS(0.99)VS(0.0)GLS(0.0)VK K:TMT10,s:Phosphorylated S DDX20 93037.6 1 4 610.1 261.86 HUMAN 1 -7.6795 -27.8102 MATARNLSNLTLAHE-p Q8N4U5;S73-p MATARNLSNLTLAHE 0.0511487796737011 0.378510739481653 -0.606666666666667 -0.18 28.3424379698712 5.60488901197869 -0.606666666666667 -0.18 0.00146472536704642 0.275112991179286 -5.94323568638426 -1.21357221516375 Q8N4U5 TCP11L2 Q8N4U5.S73.p_TCP11L2 Q8N4U5_S73sT76t_2_2_73_76 Q8N4U5 Q8N4U5|G3V1Z2 T-complex protein 11-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9992.9992.5 7.75 2.33 0 2 2 2 0 578.4946 2726.5241 S73s N74n T76t N86n TMT10 71 (R) NLsnLtLAHEIAVNEnFQLK (Q) N(0.25)LS(1.0)N(0.25)LT(1.0)LAHEIAVN(0.25)EN(0.25)FQLK K:TMT10,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T TCP11L2 58546.7 1 4 3493.1 49.81 HUMAN 1 -28.3424 -5.6049 MATETDASLSTLLTE-p Q9Y2W6;S519-p MATETDASLSTLLTE 0.732651492896551 0.02519159871217 0.0466666666666667 -0.355 2.55814207444095 21.7554511793218 0.0466666666666667 -0.355 0.554863034355669 0.00667505551626729 0.629142689086017 -4.26178790434052 Q9Y2W6 TDRKH Q9Y2W6.S519.p_TDRKH Q9Y2W6_S519s _1_1_519_519 Q9Y2W6 F6TB26|Q9Y2W6|Q5SZR4|Q9Y2W6-3 Tudor and KH domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26113.26113.4 14.85 14.85 2 7 1 1 0 706.3754 2742.505 S519s TMT10 511 (K) DMATETDAsLSTLLTETKK (S) DMAT(0.0)ET(0.0)DAS(0.99)LS(0.0)T(0.0)LLT(0.0)ET(0.0)KK K:TMT10,s:Phosphorylated S TDRKH 62444.3 1 4 2676.1 74.3 HUMAN 1 2.5581 -21.7555 MCAPRYPSGGAWDPH-p Q8TD43;S521-p MCAPRYPSGGAWDPH 0.163805813837714 0.270493458967716 -0.235666666666667 0.108666666666667 15.741727875835 7.47673738205204 -0.235666666666667 0.108666666666667 0.0266579784420481 0.17878301699302 -3.01875492718178 1.54377612555931 Q8TD43 TRPM4 Q8TD43.S521.p_TRPM4 Q8TD43_S521s _1_1_521_521 Q8TD43 Q8TD43|Q8TD43-3|Q8TD43-2 Transient receptor potential cation channel subfamily M member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28654.28654.4 10.32 8.61 1.269 5 1 1 0 809.3795 3154.5344 S521s TMT10 519 (R) YPsGGAWDPHPGQGFGESMYLLSDK (A) Y(0.0)PS(0.99)GGAWDPHPGQGFGES(0.0)MY(0.0)LLS(0.0)DK K:TMT10,s:Phosphorylated S TRPM4 135782 1 5 2606.1 76.95 HUMAN 1 -15.7417 7.4767 MCGEKQFSEERIRSG-p P39748;S317-p MCGEKQFSEERIRSG 0.653780563370571 0.105161022450406 0.067 -0.203333333333333 3.46035401866236 12.922195951397 0.067 -0.203333333333333 0.450779957350631 0.0510246935265422 0.812460058967731 -2.49569695492975 P39748 FEN1 P39748.S317.p_FEN1 P39748_S317s _1_1_317_317 P39748 P39748|P39748-2 Flap endonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8249.8249.3 8.31 8.31 99 1 1 1 0 458.5644 1293.7113 S317s TMT10 315 (K) QFsEERIR (S) QFS(1.0)EERIR s:Phosphorylated S FEN1 42934.5 1 4 2496.1 81.21 HUMAN 1 3.4604 -12.9222 MCLGLAHSLSRYRLK-p Q9Y2X3;S145-p MCLGLAHSLSRYRLK 0.0658357655531435 0.175662455364764 -0.395333333333333 -0.274666666666667 25.5413354997892 9.93203721379886 -0.395333333333333 -0.274666666666667 0.00279168523756983 0.101577209681791 -5.18219997071631 -1.96911517375126 Q9Y2X3 NOP58 Q9Y2X3.S145.p_NOP58 Q9Y2X3_S145s _1_1_145_145 Q9Y2X3 Q9Y2X3 Nucleolar protein 58 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20714.20714.3 19.11 19.11 2.267 2 1 1 0 652.6409 1875.9441 S145s TMT10 134 (R) EMAAMCLGLAHsLSR (Y) EMAAMCLGLAHS(0.99)LS(0.0)R C:Carbamidomethylation,s:Phosphorylated S NOP58 60090.6 1 4 481.1 298.21 HUMAN 1 -25.5413 -9.932 MCLVRDISNCWAPKV-p Q15061;S378-p MCLVRDISNCWAPKV 0.3545963508744 0.121984850116728 0.153666666666667 0.166 8.36870525127209 12.0508999273434 0.153666666666667 0.166 0.145589305678999 0.0623605601079483 1.69906850803882 2.34019257045904 Q15061 WDR43 Q15061.S378.p_WDR43 Q15061_S378s _1_1_378_378 Q15061 Q15061 WD repeat-containing protein 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17603.17603.3 9.42 9.42 99 1 1 1 0 543.6041 1548.8245 S378s TMT10 376 (R) DIsNCWAPK (V) DIS(1.0)NCWAPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WDR43 75859.2 1 3 2318.1 87.99 HUMAN 1 8.3687 12.0509 MCPQAFISPSKLHVH-p Q9UKN5;S601-p MCPQAFISPSKLHVH 0.370031726304172 0.00426393463930624 -0.142 -0.634666666666667 8.00557838846111 34.8469346183819 -0.142 -0.634666666666667 0.158285874933709 0.000327571823386713 -1.63612830216706 -8.03803424860452 Q9UKN5 PRDM4 Q9UKN5.S601.p_PRDM4 Q9UKN5_S601s _1_1_601_601 Q9UKN5 Q9UKN5 PR domain zinc finger protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20740.20740.3 16.28 16.28 3.763 3 1 1 0 684.3244 1970.9902 S601s TMT10 592 (K) CSMCPQAFIsPSK (L) CS(0.0)MCPQAFIS(0.99)PS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRDM4 89344.8 1 2 2760.1 71.49 HUMAN 1 -8.0056 -34.8469 MCRLDIDSPPITARN-p P14618;S37-p MCRLDIDSPPITARN 0.59953861846786 0.560845518091929 0.0993333333333333 0.119666666666667 4.10516813985549 3.38618730286793 0.0993333333333334 0.119666666666667 0.388582453447711 0.458544268807483 0.937179943366438 0.797696239668196 P14618 PKM P14618.S37.p_PKM P14618_S37s _1_1_37_37 P14618 P14618|P14618-2|B4DNK4|H3BQ34|H3BQZ3 Pyruvate kinase PKM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15840.15840.2 13.23 13.23 8.272 2 1 1 0 639.3116 1197.6474 S37s Hydrogen 33 (R) LDIDsPPITAR (N) LDIDS(0.99)PPIT(0.0)AR s:Phosphorylated S PKM 58506.4 4 2 502.1 291.2 HUMAN 1 4.1052 3.3862 MDAFKRHSFATEGAG-p Q6ZRV2;S411-p MDAFKRHSFATEGAG 0.330875085214081 0.544547341266792 0.138333333333333 0.0573333333333333 8.978383986721 3.54999645330736 0.138333333333333 0.0574770472261088 0.126520704445668 0.441570807964686 1.80462091735227 0.829941141807832 Q6ZRV2 FAM83H Q6ZRV2.S411.p_FAM83H Q6ZRV2_S411s _1_1_411_411 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13898.13898.3 16.41 16.41 1.277 2 1 1 0 757.701 2191.1206 S411s TMT10 409 (K) RHsFATEGAGAVENFAAAR (Q) RHS(0.99)FAT(0.0)EGAGAVENFAAAR s:Phosphorylated S FAM83H 127633.5 2 4 7.1 1347.23 HUMAN 1 8.9784 3.55 MDDMAVDSDEEVDYS-p Q13123;S460-p MDDMAVDSDEEVDYS 0.653631506608281 0.381229610439034 0.0603333333333333 0.0856666666666667 3.46291715427859 5.56371419428717 0.0603333333333333 0.0856666666666667 0.450513992820388 0.27773370041898 0.812964920426685 1.20616466657352 Q13123 IK Q13123.S460.p_IK Q13123_S460s_1_1_460_460 Q13123 Q13123|A0A0C4DGW5 Protein Red HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31742.31742.3 22.43 22.43 1.26 8 1 1 0 1514.6381 4445.9122 M456m S460s TMT10 434 (K) QLGDFFGMSNSYAECYPATMDDmAVDsDEEVDYSK (M) Q(0.0)LGDFFGM(0.0)S(0.0)N(0.0)S(0.0)Y(0.0)AECY(0.0)PAT(0.0)M(0.0)DDM(0.99)AVDS(0.99)DEEVDY(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,s:Phosphorylated S IK 65715.2 70 2 2972.1 64.33 HUMAN 1 3.4629 5.5637 MDDNLRQSPQLPPRK-p Q5HYI7;S284-p MDDNLRQSPQLPPRK 0.780774653521955 0.321293187451003 0.0473333333333333 0.108666666666667 2.06594645936593 6.5195068855638 0.0473333333333334 0.108666666666667 0.62144880045639 0.22286881886193 0.523357327855777 1.37626006567493 Q5HYI7 MTX3 Q5HYI7.S284.p_MTX3 Q5HYI7_S284s _1_1_284_284 Q5HYI7 Q5HYI7|Q5HYI7-5 Metaxin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11884.12500.3 15.93 15.93 99 1 1 1 0 659.3263 1895.9959 S284s TMT10 277 (K) MDDNLRQsPQLPPR (K) MDDNLRQS(1.0)PQLPPR s:Phosphorylated S MTX3 35320.9 11 2 3123.1 60.2 HUMAN 1 2.0659 6.5195 MDEDGDESIHKLKEK-p Q9Y5S9-2;S24-p MDEDGDESIHKLKEK 0.873216810979358 0.539834832323375 0.0363333333333333 0.0716666666666667 1.15175510886926 3.60158483691036 0.0363333333333333 0.0716666666666667 0.767051439175189 0.436356566990591 0.31152305987033 0.840030335597383 Q9Y5S9 RBM8A Q9Y5S9.2.S24.p_RBM8A Q9Y5S9-2_S24s _1_1_24_24 Q9Y5S9-2 Q9Y5S9|Q9Y5S9-2 Isoform 2 of RNA-binding protein 8A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.39637.39637.4 25.82 25.82 99 1 1 1 0 909.9238 3556.7154 S24s Acetyl 2 (M) ADVLDLHEAGGEDFAMDEDGDEsIHKLK (E) ADVLDLHEAGGEDFAMDEDGDES(1.0)IHKLK K:TMT10,s:Phosphorylated S RBM8A 19816.6 14 2 2408.1 84.82 HUMAN 1 1.1518 3.6016 MDEKLQPSPNRREDR-p O43150;S712-p MDEKLQPSPNRREDR 0.153364244244344 0.880207588788141 -0.348 -0.0233333333333333 16.3731020433057 0.77930115755379 -0.348 -0.0233333333333333 0.0230510013239112 0.835737489625096 -3.14016158792962 -0.217542983674273 O43150 ASAP2 O43150.S712.p_ASAP2 O43150_S712s _1_1_712_712 O43150 O43150|O43150-2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20166.20166.4 12.94 10.48 1.194 6 1 1 0 988.5116 3871.0524 S712s TMT10 709 (K) LQPsPNRREDRPISFYQLGSNQLQSNAVSLAR (D) LQPS(0.99)PNRREDRPIS(0.0)FY(0.0)QLGS(0.0)NQLQS(0.0)NAVS(0.0)LAR s:Phosphorylated S ASAP2 112903.8 2 3 1037.1 185.54 HUMAN 1 -16.3731 -0.7793 MDGLPKSSPGAVAGL-p Q9BWG4;S342-p MDGLPKSSPGAVAGL 0.449084131093254 0.0404768025470952 -0.156 0.339333333333333 6.42173577265944 18.6732764018706 -0.156 0.339333333333333 0.227943085514128 0.0135728909500133 -1.35936088118975 3.59674405334811 Q9BWG4 SSBP4 Q9BWG4.S342.p_SSBP4 Q9BWG4_S342s _1_1_342_342 Q9BWG4 Q9BWG4|Q9BWG4-2|V9GYB2 Single-stranded DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13464.13464.2 15.36 8.73 1.445 4 1 1 0 924.463 1767.9551 S342s TMT10 341 (K) SsPGAVAGLSNAPGTPR (D) S(0.0)S(0.99)PGAVAGLS(0.0)NAPGT(0.0)PR s:Phosphorylated S SSBP4 39558.9 2 1 4770.1 26.89 HUMAN 1 -6.4217 18.6733 MDGQAPGSPPALRIP-p Q70EL4;S1041-p MDGQAPGSPPALRIP 0.395304354889455 0.631758831576157 0.118 0.048 7.4377585913339 2.71129390441474 0.118 0.048 0.180394852464837 0.535637050052064 1.53744363749614 0.661049211981215 Q70EL4 USP43 Q70EL4.S1041.p_USP43 Q70EL4_S1041s _1_1_1041_1041 Q70EL4 Q70EL4|Q70EL4-4|Q70EL4-3|Q70EL4-2 Ubiquitin carboxyl-terminal hydrolase 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32889.32889.4 23.1 23.1 2.156 5 1 1 0 1054.3037 4134.2219 S1041s TMT10 1014 (R) AEVSPQVPPVSLVSGGLSPAMDGQAPGsPPALRIPEGLAR (G) AEVS(0.0)PQVPPVS(0.0)LVS(0.0)GGLS(0.0)PAMDGQAPGS(0.99)PPALRIPEGLAR s:Phosphorylated S USP43 124119.2 10 10 817.1 219.69 HUMAN 1 7.4378 2.7113 MDKGKELSGLGSALK-p P49748-3;S508-p MDKGKELSGLGSALK 0.929481382162446 0.0602666189041986 0.0166666666666667 0.340333333333333 0.630191564033176 16.2526369536237 0.0166666666666667 0.340333333333333 0.864929766532074 0.0236993428961606 0.178357225735625 3.11460676232038 P49748 ACADVL P49748.3.S508.p_ACADVL P49748-3_S508s _1_1_508_508 P49748-3 P49748-3|P49748-2 Isoform 3 of Very long-chain specific acyl-CoA dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19034.19034.3 12.81 12.81 3.369 2 1 1 0 643.0469 1847.1569 S508s TMT10 504 (K) GKELsGLGSALK (N) GKELS(0.99)GLGS(0.0)ALK K:TMT10,s:Phosphorylated S ACADVL 73325.2 2 2 2868.1 67.8 HUMAN 1 0.6302 16.2526 MDKSPFNSPSPQDSP-p P08651;S337-p MDKSPFNSPSPQDSP 0.228095422318106 0.0393337761103315 -0.192 -0.369 12.3353207427027 18.8587615444198 -0.192 -0.369 0.0584074069447437 0.0130054039367674 -2.39195627019643 -3.63503922587703 P08651 NFIC P08651.S337.p_NFIC P08651_S337s _1_1_337_337 P08651 A0A286YEX4|P08651|P08651-2|P08651-6|P08651-3|P08651-5 Nuclear factor 1 C-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10743.10743.3 7.15 7.15 2.352 4 1 1 0 575.6 1644.8179 S337s TMT10 333 (K) SPFNsPSPQDSPR (L) S(0.0)PFNS(0.99)PS(0.0)PQDS(0.0)PR s:Phosphorylated S NFIC 56130.4 2 10 674.1 247.72 HUMAN 1 -12.3353 -18.8588 MDLFHRDSDDDQTEE-p Q9HAW4;S1156-p MDLFHRDSDDDQTEE 0.863506870585055 0.00852867300885356 0.0243333333333333 -0.821666666666667 1.24336274492949 29.3637027692542 0.0263975874295681 -0.821666666666667 0.75104113719078 0.00115778981043241 0.333856636678788 -6.23123848371925 Q9HAW4 CLSPN Q9HAW4.S1156.p_CLSPN Q9HAW4_S1156s _1_1_1156_1156 Q9HAW4 Q9HAW4|Q9HAW4-3|E7ESG2|Q9HAW4-2 Claspin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18449.18449.4 27.26 27.26 5.313 4 1 1 0 959.1535 3753.6256 S1156s TMT10 1142 (K) NIDDASQMDLFHRDsDDDQTEEQLDESEAR (W) NIDDAS(0.0)QMDLFHRDS(0.99)DDDQT(0.0)EEQLDES(0.0)EAR s:Phosphorylated S CLSPN 151718.8 3 9 506.1 289.61 HUMAN 1 1.2434 -29.3637 MDLMVEASPRRIFAN-p P63151-2;S177-p MDLMVEASPRRIFAN 0.848303400988284 0.518034411714254 -0.0293333333333333 0.0653333333333334 1.38139074055845 3.83720607123308 -0.0293333333333333 0.0653333333333333 0.727546785032669 0.413313311626893 -0.366987752907487 0.885735060478144 P63151 PPP2R2A P63151.2.S177.p_PPP2R2A P63151-2_S177s _1_1_177_177 P63151-2 P63151-2 Isoform 2 of Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27817.27817.3 12.65 12.65 99 1 1 1 0 718.3655 2073.1187 S177s TMT10 164 (R) VPVFRPMDLMVEAsPR (R) VPVFRPMDLMVEAS(1.0)PR s:Phosphorylated S PPP2R2A 53512.2 1 1 6274.1 12.65 HUMAN 1 -1.3814 3.8372 MDLNSDDSTDDEAHP-p Q9NQS7;S831-p MDLNSDDSTDDEAHP 0.748530975556737 0.0441067295997413 0.0518333333333333 -0.3335 2.39102414965477 18.1537734413813 0.0518333333333333 -0.3335 0.576630466837878 0.0152975772809623 0.593755682459361 -3.49056470221031 Q9NQS7 INCENP Q9NQS7.S831.p_INCENP Q9NQS7_S828sS831s_2_2_828_831 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21874.21874.4 20.76 20.76 1.248 5 2 2 0 1040.7212 3998.9343 N827n S828s S831s TMT10 817 (K) INPDNYGMDLnsDDsTDDEAHPRKPIPTWAR (G) IN(0.0)PDN(0.0)Y(0.0)GMDLN(0.99)S(0.99)DDS(0.99)T(0.0)DDEAHPRKPIPT(0.0)WAR K:TMT10,n:Deamidated,s:Phosphorylated S INCENP 105826.3 3 32 138.1 524.38 HUMAN 2 2.391 -18.1538 MDNTQENSLKSGKGA-p Q9H4G0-2;S657-p MDNTQENSLKSGKGA 0.569737548726187 0.00248584650157384 0.235333333333333 -0.741 4.49629064275064 39.8864756748988 0.235333333333333 -0.741 0.355116568733404 0.000102648458659224 1.01088451783196 -10.0804156988259 Q9H4G0 EPB41L1 Q9H4G0.2.S657.p_EPB41L1 Q9H4G0-2_S657s _1_1_657_657 Q9H4G0-2 Q9H4G0-2 Isoform 2 of Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13261.13261.3 13.98 13.98 3.086 3 1 1 0 658.9913 1894.9944 S657s TMT10 647 (R) VSAMDNTQENsLK (S) VS(0.0)AMDNT(0.0)QENS(0.99)LK K:TMT10,s:Phosphorylated S EPB41L1 88214.2 3 33 174.3 483.37 HUMAN 1 4.4963 -39.8865 MDPNIVGSEHYDVAR-p P06576;S415-p MDPNIVGSEHYDVAR 0.845323173757714 0.226163824404371 -0.0396666666666667 0.173666666666667 1.41009743772813 8.502212989465 -0.0396666666666666 0.173666666666667 0.722753587817595 0.141181795583069 -0.373803242964668 1.72160756867476 P06576 ATP5B P06576.S415.p_ATP5B P06576_S415s _1_1_415_415 P06576 P06576 ATP synthase subunit beta, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18824.18824.3 19.41 19.41 8.616 2 1 1 0 709.0058 2045.0323 S415s TMT10 407 (R) IMDPNIVGsEHYDVAR (G) IMDPNIVGS(0.99)EHY(0.0)DVAR s:Phosphorylated S ATP5B 56558.9 1 4 2156.1 95.32 HUMAN 1 -1.4101 8.5022 MDPNSDDSSRNLFVK-p Q5FBB7;S129-p MDPNSDDSSRNLFVK 0.515885052439712 0.123652029356351 0.0883333333333333 -0.170333333333333 5.30638013901056 11.9760659651014 0.0883333333333333 -0.170333333333333 0.294687684347664 0.0634444159113757 1.15991920853262 -2.32693176060178 Q5FBB7 SGOL1 Q5FBB7.S129.p_SGOL1 Q5FBB7_S126sS129s_2_2_126_129 Q5FBB7 Q5FBB7|Q5FBB7-6|Q5FBB7-2|Q5FBB7-3|Q5FBB7-4|Q5FBB7-5|Q5FBB7-7 Shugoshin 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20131.20131.4 16.19 13.75 1.161 8 2 2 0 1204.8208 4655.3284 N125n S126s S129s TMT10 101 (K) GKLTSQQTVEPAQNQEICSSGMDPnsDDsSRNLFVK (D) GKLT(0.0)S(0.0)QQT(0.0)VEPAQN(0.0)QEICS(0.0)S(0.0)GMDPN(0.99)S(0.99)DDS(0.99)S(0.0)RN(0.0)LFVK K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S SGO1 65044.6 4 21 1140.1 173.27 HUMAN 1 5.3064 -11.9761 MDRFSFHSPSAQQRL-p Q9NQT8;S661-p MDRFSFHSPSAQQRL 0.405906564884755 0.0283299286573973 0.121333333333333 -0.452 7.22951941230026 20.9684722955667 0.121333333333333 -0.452 0.189255303585506 0.00800115659751336 1.50113258483465 -4.0858850233138 Q9NQT8 KIF13B Q9NQT8.S661.p_KIF13B Q9NQT8_S661s _1_1_661_661 Q9NQT8 Q9NQT8 Kinesin-like protein KIF13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11180.11180.3 9.45 9.45 3.34 3 1 1 0 534.2544 1520.7807 S661s TMT10 657 (R) FSFHsPSAQQR (L) FS(0.0)FHS(0.99)PS(0.0)AQQR s:Phosphorylated S KIF13B 204097.3 1 3 335.1 355.82 HUMAN 1 7.2295 -20.9685 MDRKKFHSSDSEEEE-p Q96ST2;S362-p MDRKKFHSSDSEEEE 0.250489985928927 0.158087349091926 -0.257 0.176333333333333 11.4745168928713 10.5374188688633 -0.257 0.176333333333333 0.0712112010596884 0.088360489500057 -2.23945991324208 2.07436292326892 Q96ST2 IWS1 Q96ST2.S362.p_IWS1 Q96ST2_S362sS363sS365s_3_3_362_365 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7109.7109.5 8.1 8.1 99 3 3 3 0 575.4728 2633.4341 S362s S363s S365s TMT10 359 (K) KFHssDsEEEEHKK (Q) KFHS(1.0)S(1.0)DS(1.0)EEEEHKK K:TMT10,s:Phosphorylated S IWS1 92010 5 21 230.1 422.87 HUMAN 1 -11.4745 10.5374 MDRSCSSTPVGNEST-p Q86V15;T1378-p MDRSCSSTPVGNEST 0.177004708498973 0.00538714088013543 0.281666666666667 0.665 14.9093455067283 32.9392584427795 0.281666666666667 0.665 0.0322898070097993 0.000508246218122561 2.86146607605903 7.36549458094389 Q86V15 CASZ1 Q86V15.T1378.p_CASZ1 Q86V15_T1378t _1_1_1378_1378 Q86V15 Q86V15 Zinc finger protein castor homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15930.15930.4 13.89 13.89 1.106 10 1 1 0 781.1223 3041.492 T1378t TMT10 1374 (R) SCSStPVGNESTAAGNTISMPTASGAK (K) S(0.0)CS(0.0)S(0.0)T(0.99)PVGNES(0.0)T(0.0)AAGNT(0.0)IS(0.0)MPT(0.0)AS(0.0)GAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CASZ1 193374.5 2 9 530.1 281.17 HUMAN 1 14.9093 32.9393 MDSDEDDSEELEEDD-p Q9H9B1;S353-p MDSDEDDSEELEEDD 0.356784883442257 0.124968232578908 0.127666666666667 0.259333333333333 8.32090751237546 11.9125431699534 0.127666666666667 0.259333333333333 0.147200487655209 0.0643792159100156 1.69078872379264 2.3156862119053 Q9H9B1 EHMT1 Q9H9B1.S353.p_EHMT1 Q9H9B1_S348sS353s_2_2_348_353 Q9H9B1 Q9H9B1|A0A1B0GV09|Q9H9B1-3|Q9H9B1-4|A0A1B0GUD1 Histone-lysine N-methyltransferase EHMT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22553.22553.4 23.55 23.55 2.753 7 2 2 0 1324.5321 5135.1777 S348s S353s TMT10 331 (K) DLGASSLHVNGESLEMDsDEDDsEELEEDDGHGAEQAAAFPTEDSR (T) DLGAS(0.0)S(0.0)LHVNGES(0.0)LEMDS(0.99)DEDDS(0.99)EELEEDDGHGAEQAAAFPT(0.0)EDS(0.0)R s:Phosphorylated S EHMT1 144088.3 1 9 1454.1 140.61 HUMAN 1 8.3209 11.9125 MDSGGGPSPGPGGGP-p Q9UPU5;S63-p MDSGGGPSPGPGGGP 0.787952750145453 0.227938708193828 0.039 0.127 1.99700264087216 8.45958634177959 0.039 0.127 0.631392961005173 0.142574338680479 0.508138151375843 1.71423177532228 Q9UPU5 USP24 Q9UPU5.S63.p_USP24 Q9UPU5_S63s _1_1_63_63 Q9UPU5 Q9UPU5 Ubiquitin carboxyl-terminal hydrolase 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31023.31023.5 32.32 29.98 2.274 5 1 1 0 859.4025 4213.0094 S63s TMT10 32 (K) NDINEAVALLTNERPGLDYGGYEPMDSGGGPsPGPGGGPR (G) NDINEAVALLT(0.0)NERPGLDY(0.0)GGY(0.0)EPMDS(0.0)GGGPS(0.99)PGPGGGPR s:Phosphorylated S USP24 297383.8 7 126 8.4 1346.57 HUMAN 1 1.997 8.4596 MDSGSSESPASLKRV-p Q15811;S986-p MDSGSSESPASLKRV 0.705319541148296 0.467127271995484 -0.0646666666666667 0.0703333333333333 2.84942651605728 4.40691503425047 -0.0646666666666667 0.0703333333333334 0.518868550768046 0.362500405380989 -0.689659598681505 0.993974352511741 Q15811 ITSN1 Q15811.S986.p_ITSN1 Q15811_S986s _1_1_986_986 Q15811 Q15811|Q15811-8|Q15811-9|Q15811-4|Q15811-2|Q15811-7|Q15811-10|F8W7U0|Q15811-3|Q15811-11|Q15811-12|Q15811-6 Intersectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12296.12296.2 17.94 17.94 2.238 8 1 1 0 1054.9954 2029.016 S986s TMT10 976 (K) STSMDSGSSEsPASLK (R) S(0.0)T(0.0)S(0.0)MDS(0.0)GS(0.0)S(0.0)ES(0.99)PAS(0.0)LK K:TMT10,s:Phosphorylated S ITSN1 196273.9 3 6 790.1 224.94 HUMAN 1 -2.8494 4.4069 MDSKGDVSGVLIAGG-p D6REX3;S86-p MDSKGDVSGVLIAGG 0.219634467679689 0.0376335758420537 0.181666666666667 0.382 12.6752290380537 19.1367850779178 0.181666666666667 0.382 0.0540103630049455 0.0121989230610411 2.45270630255484 3.69282843831625 D6REX3 NotFound D6REX3.S86.p_NotFound D6REX3_S86s_1_1_86_86 D6REX3 D6REX3|O94979-8|O94979-2|O94979-5 Protein transport protein Sec31A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10846.11267.5 7.36 5.91 1.687 4 1 1 0 658.7228 3207.6972 S86s N95n N97n Hydrogen 79 (K) MDSKGDVsGVLIAGGEnGnIILYDPSK (I) MDS(0.0)KGDVS(0.99)GVLIAGGEN(1.0)GN(1.0)IILY(0.0)DPS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated SEC31A 137193.7 1 1 665.1 250.42 HUMAN 1 12.6752 19.1368 MDSPKHQSDPSEDED-p Q96BR1;S126-p MDSPKHQSDPSEDED 0.379392937735762 0.108314402555847 0.1255 0.219166666666667 7.77548919028612 12.7542064480311 0.1255 0.219166666666667 0.16689798023606 0.05303704941829 1.59618821596268 2.46554686292873 Q96BR1 SGK3 Q96BR1.S126.p_SGK3 Q96BR1_S126sS129s_2_2_126_129 Q96BR1 Q96BR1|Q96BR1-2 Serine/threonine-protein kinase Sgk3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15100.15100.4 15.71 11.79 3.224 5 2 2 0 935.4282 3578.7636 S126s S129s TMT10 115 (R) AFLQMDSPKHQsDPsEDEDERSSQK (L) AFLQMDS(0.0)PKHQS(0.99)DPS(0.99)EDEDERS(0.0)S(0.0)QK K:TMT10,s:Phosphorylated S SGK3 57449.4 10 3 3364.1 52.81 HUMAN 2 7.7755 12.7542 MDSPRKVSVDQTATP-p O75140-4;S1090-p MDSPRKVSVDQTATP 0.766254806474822 0.0176939610004348 0.048 0.337 2.21797084505457 24.1361152070369 0.048 0.337 0.600071382234361 0.00385823324879705 0.556549874310643 4.82250668174111 O75140 DEPDC5 O75140.4.S1090.p_DEPDC5 O75140-4_S1090s _1_1_1090_1090 O75140-4 O75140-4|O75140-1|O75140-8 Isoform 4 of GATOR complex protein DEPDC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23969.23969.4 15.41 15.41 2.243 7 1 1 0 852.4208 3326.6795 S1090s TMT10 1088 (R) KVsVDQTATPMLDGTSLGICTGQSMDR (G) KVS(0.99)VDQT(0.0)AT(0.0)PMLDGT(0.0)S(0.0)LGICT(0.0)GQS(0.0)MDR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DEPDC5 180421.4 2 8 935.1 198.76 HUMAN 1 2.218 24.1361 MDSRFLETDSEEEQE-p Q76FK4;T888-p MDSRFLETDSEEEQE 0.212865554763296 0.544547341266792 -0.237 0.0576666666666667 12.9635275705085 3.55016324807657 -0.237 0.0576666666666667 0.0505413971154864 0.441553849359463 -2.50449685896309 0.829973811590848 Q76FK4 NOL8 Q76FK4.T888.p_NOL8 Q76FK4_T888tS890s_2_2_888_890 Q76FK4 Q76FK4|Q76FK4-4|Q76FK4-2|F5H101 Nucleolar protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21929.21929.2 14.34 11.75 99 2 2 2 0 1287.0505 2413.1659 T888t S890s TMT10 885 (R) FLEtDsEEEQEEVNEK (K) FLET(1.0)DS(1.0)EEEQEEVNEK K:TMT10,t:Phosphorylated T,s:Phosphorylated S NOL8 132527 8 11 605.1 262.45 HUMAN 1 -12.9635 3.5502 MDSYLNQSYGMDNHS-p Q5BKZ1;S56-p MDSYLNQSYGMDNHS 0.897297614132302 0.901394603448568 -0.0193333333333333 0.0123333333333333 0.922402085529497 0.628861143666158 -0.0193333333333333 0.0123333333333333 0.808648511460822 0.865194770233376 -0.254298920030746 0.177986111830056 Q5BKZ1 ZNF326 Q5BKZ1.S56.p_ZNF326 Q5BKZ1_S56s _1_1_56_56 Q5BKZ1 Q5BKZ1|Q5BKZ1-2 DBIRD complex subunit ZNF326 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14139.14139.3 20.99 20.99 3.576 7 1 1 0 896.0338 2606.1197 S56s TMT10 48 (R) SMDSYLNQsYGMDNHSGGGGGSR (F) S(0.0)MDS(0.0)Y(0.0)LNQS(0.99)Y(0.0)GMDNHS(0.0)GGGGGS(0.0)R s:Phosphorylated S ZNF326 65995 9 1 1326.1 153.85 HUMAN 1 -0.9224 0.6289 MDTTGERSPSPLTGK-p Q9P2F8;S1650-p MDTTGERSPSPLTGK 0.659829317652971 0.0990132716732784 -0.119333333333333 -0.331 3.3832127094829 13.2724859492183 -0.119333333333333 -0.331 0.458858445023276 0.0470707810956997 -0.797228034215561 -2.55884606418566 Q9P2F8 SIPA1L2 Q9P2F8.S1650.p_SIPA1L2 Q9P2F8_S1650s _1_1_1650_1650 Q9P2F8 Q9P2F8|Q9P2F8-2 Signal-induced proliferation-associated 1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17249.17249.3 9.74 9.74 1.309 5 1 1 0 797.7241 2311.2004 S1650s TMT10 1641 (K) EFMDTTGERsPSPLTGK (V) EFMDT(0.0)T(0.0)GERS(0.99)PS(0.0)PLT(0.0)GK K:TMT10,s:Phosphorylated S SIPA1L2 192488.1 3 15 322.1 363.46 HUMAN 1 -3.3832 -13.2725 MDVEKRGSAKELLQH-p Q13177;S490-p MDVEKRGSAKELLQH 0.151101954839766 0.0417350905682356 1.82 -1.833 16.543607110565 18.4875712002013 1.82 -1.833 0.0221635482194647 0.0141658578665167 3.17327698442805 -3.5586079074009 Q13177 PAK2 Q13177.S490.p_PAK2 Q13177_S490s _1_1_490_490 Q13177 Q13153|Q13177|B3KNX7|E9PM17 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12356.12356.4 13.12 13.12 99 1 1 1 0 573.3034 2210.224 S490s TMT10 480 (R) CLEMDVEKRGsAK (E) CLEMDVEKRGS(1.0)AK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PAK2 58326.8 2 34 272.1 393.22 HUMAN 1 16.5436 -18.4876 MDWVLKHTGPNSPDT-p G8JLB6;T100-p MDWVLKHTGPNSPDT 0.0444264213909403 0.0146897449338781 0.658 0.482666666666667 30.0956993861426 25.3849318886089 0.658 0.482666666666667 0.000978205412280949 0.00289405520483494 6.461293233626 5.13539486480322 G8JLB6 HNRNPH1 G8JLB6.T100.p_HNRNPH1 G8JLB6_T100tS104s_2_2_100_104 G8JLB6 G8JLB6|P31943|E9PCY7|D6RIH9 Heterogeneous nuclear ribonucleoprotein H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23124.23124.4 16.91 16.91 2.54 4 2 2 0 905.4227 3458.7163 T100t S104s TMT10 88 (K) SNNVEMDWVLKHtGPNsPDTANDGFVR (L) S(0.0)NNVEMDWVLKHT(0.99)GPNS(0.99)PDT(0.0)ANDGFVR K:TMT10,t:Phosphorylated T,s:Phosphorylated S HNRNPH1 51514.2 1 6 990.2 191.56 HUMAN 1 30.0957 25.3849 MDYLAVPSPLAWSKA-p Q14934-3;S445-p MDYLAVPSPLAWSKA 0.26956048078314 0.15972644115878 -0.159333333333333 -0.188666666666667 10.7891113626432 10.4760455929578 -0.159333333333333 -0.188666666666667 0.0833851786843318 0.0896180398561187 -2.1192030461315 -2.06367132417127 Q14934 NFATC4 Q14934.3.S445.p_NFATC4 Q14934-3_S445s _1_1_445_445 Q14934-3 Q14934-2|Q14934-3|Q14934-4|Q14934-10|Q14934-11|Q14934-12|Q14934-13|Q14934-14|Q14934-15|Q14934-5|Q14934-6|Q14934-7|Q14934-8|Q14934-9|Q14934-16|Q14934-17|Q14934-18 Isoform 3 of Nuclear factor of activated T-cells, cytoplasmic 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33794.33794.3 15.27 15.27 8.214 3 1 1 0 824.762 2392.2987 S445s TMT10 434 (K) EVAGMDYLAVPsPLAWSK (A) EVAGMDY(0.0)LAVPS(0.99)PLAWS(0.0)K K:TMT10,s:Phosphorylated S NFATC4 102537.7 1 16 1768.1 116.39 HUMAN 1 -10.7891 -10.476 MEAGESASPANILED-p Q15147-5;S488-p MEAGESASPANILED 0.487566830417498 0.00575422933881225 0.150666666666667 0.512 5.74893516238032 32.4177418373296 0.150666666666667 0.512 0.266137751743387 0.000573093940124296 1.23970642272029 7.19019092631083 Q15147 PLCB4 Q15147.5.S488.p_PLCB4 Q15147-5_S488s_1_1_488_488 Q15147-5 Q15147-4|Q15147-5|Q15147-2 Isoform 4 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24972.24972.4 18.48 18.48 1.19 4 1 1 0 1162.5131 4566.0336 S488s N497n TMT10 479 (R) SMMEAGESAsPANILEDDnEEEIESADQEEEAHPEFK (F) S(0.0)MMEAGES(0.0)AS(0.99)PAN(0.0)ILEDDN(0.99)EEEIES(0.0)ADQEEEAHPEFK K:TMT10,s:Phosphorylated S,n:Deamidated PLCB4 136983.7 2 1 1968.1 104.91 HUMAN 1 5.7489 32.4177 MEAKEQLSAQELMES-p Q12888-2;S285-p MEAKEQLSAQELMES 0.957062874071958 0.0292122210628007 0.00866666666666666 0.358666666666667 0.374612291240917 20.770779804749 0.00866666666666667 0.358666666666667 0.917357827240661 0.00837378911650801 0.108699608953869 4.04238542461695 Q12888 TP53BP1 Q12888.2.S285.p_TP53BP1 Q12888-2_S285s _1_1_285_285 Q12888-2 Q12888-2 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27049.27049.3 12.52 12.52 5.085 2 1 1 0 824.0954 2390.3001 S285s TMT10 282 (K) EQLsAQELMESGLQIQK (S) EQLS(0.99)AQELMES(0.0)GLQIQK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 3 11 3.1 2297.07 HUMAN 1 0.3746 20.7708 MEDGEEGSDDEAEWV-p Q9NZN4;S438-p MEDGEEGSDDEAEWV 0.546236180544102 0.632379182346825 -0.106333333333333 0.0913333333333334 4.84983651041299 2.7051281773235 -0.106333333333333 0.0913333333333333 0.327353017808227 0.536398039998136 -1.07646664813743 0.659769111376752 Q9NZN4 EHD2 Q9NZN4.S438.p_EHD2 Q9NZN4_S438s _1_1_438_438 Q9NZN4 Q9NZN4|Q9NZN4-2 EH domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23033.23033.3 19.58 19.55 8.78 2 1 1 0 1011.7688 2953.3297 S438s TMT10 426 (R) GPDEAMEDGEEGsDDEAEWVVTK (D) GPDEAMEDGEEGS(0.99)DDEAEWVVT(0.0)K K:TMT10,s:Phosphorylated S EHD2 61331.4 2 10 1561.2 131.45 HUMAN 1 -4.8498 2.7051 MEEIQNESACGLDVG-p F5H2X7;S552-p MEEIQNESACGLDVG 0.301224036518654 0.528762053995241 0.176 0.0703333333333333 9.7819009698812 3.72098163217362 0.176 0.0703333333333333 0.105150151562708 0.424523598388455 1.94384291264288 0.863265668016685 F5H2X7 CIZ1 F5H2X7.S552.p_CIZ1 F5H2X7_S552s _1_1_552_552 F5H2X7 F5H2X7|Q9ULV3|Q5SYW2|Q9ULV3-2|Q9ULV3-4|Q9BTG3|Q9ULV3-3|Q9ULV3-5 Cip1-interacting zinc finger protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24832.24832.3 23.58 23.58 2.283 4 1 1 0 1253.2277 3677.6931 S552s TMT10 534 (K) TLPEPVGTQVSMEEIQNEsACGLDVGECENR (A) T(0.0)LPEPVGT(0.0)QVS(0.0)MEEIQNES(0.99)ACGLDVGECENR C:Carbamidomethylation,s:Phosphorylated S CIZ1 107380.6 2 9 497.1 292.98 HUMAN 1 9.7819 3.721 MEEKDEYSSSETTGE-p Q8NFC6;S2843-p MEEKDEYSSSETTGE 0.254658962170373 0.147144465082663 -0.205333333333333 0.154666666666667 11.3065508093616 10.9589336963919 -0.205333333333333 0.154666666666667 0.0740192906950947 0.0801874919944071 -2.20990411887712 2.14795219779275 Q8NFC6 BOD1L1 Q8NFC6.S2843.p_BOD1L1 Q8NFC6_S2843s _1_1_2843_2843 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14323.14323.4 14.77 14.77 1.21 7 1 1 0 1025.9928 4020.9889 S2843s TMT10 2835 (R) VMEEKDEYsSSETTGEKPEQNDDDTIK (S) VMEEKDEY(0.0)S(0.99)S(0.0)S(0.0)ET(0.0)T(0.0)GEKPEQNDDDT(0.0)IK K:TMT10,s:Phosphorylated S BOD1L1 332628.7 2 22 97.1 603.4 HUMAN 1 -11.3066 10.9589 MEEKELLSPLSEPDD-p Q9UHB7;S703-p MEEKELLSPLSEPDD 0.485467310430729 0.0831172407795889 -0.106333333333333 0.203333333333333 5.78254662696479 14.3028298883192 -0.106333333333333 0.203333333333333 0.264085974919313 0.0371293213420495 -1.24572751232515 2.74699879229901 Q9UHB7 AFF4 Q9UHB7.S703.p_AFF4 Q9UHB7_S703s _1_1_703_703 Q9UHB7 Q9UHB7|Q9UHB7-2 AF4/FMR2 family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28475.28475.2 19.6 19.6 2.699 3 1 1 0 1311.713 2542.4533 S703s TMT10 700 (K) ELLsPLSEPDDRYPLIVK (I) ELLS(0.99)PLS(0.0)EPDDRY(0.0)PLIVK K:TMT10,s:Phosphorylated S AFF4 127856.3 4 16 137.1 525.98 HUMAN 1 -5.7825 14.3028 MEFSDLESDSEEKPC-p Q9P2D1;S1581-p MEFSDLESDSEEKPC 0.995213264133306 0.0873607950416798 -0.000999999999999992 -0.307666666666667 0.0399716826415749 14.0159436907837 -0.000999999999999989 -0.307666666666667 0.990838405447982 0.039664833072734 -0.0120225898977445 -2.69422780897703 Q9P2D1 CHD7 Q9P2D1.S1581.p_CHD7 Q9P2D1_S1577sS1581s_2_2_1577_1581 Q9P2D1 Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24899.24899.4 10.99 10.99 2.971 5 2 2 0 1120.5435 4319.2233 S1577s S1581s TMT10 1564 (R) LYSAVKEDELMEFsDLEsDSEEKPCAKPR (R) LY(0.0)S(0.0)AVKEDELMEFS(0.99)DLES(0.99)DS(0.0)EEKPCAKPR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CHD7 337747 1 17 256.1 399.25 HUMAN 1 -0.04 -14.0159 MEGYRAPSRQDVYGP-p O60716-3;S252-p MEGYRAPSRQDVYGP 0.341848649788872 0.656000925635131 0.150333333333333 0.109 8.66485668675238 2.50238180716958 0.150333333333333 0.109 0.135992303877331 0.562033004122121 1.75034870061256 0.617313567889052 O60716 CTNND1 O60716.3.S252.p_CTNND1 O60716-3_S252s _1_1_252_252 O60716-3 O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8415.8415.3 13.57 9.64 6.466 2 1 1 0 669.6715 1927.0347 S252s TMT10 250 (R) APsRQDVYGPQPQVR (V) APS(0.99)RQDVY(0.0)GPQPQVR s:Phosphorylated S CTNND1 105545.3 4 16 21.1 1014.17 HUMAN 1 8.6649 2.5024 MEHPGEESPGRKSTV-p Q6P995;S779-p MEHPGEESPGRKSTV 0.880959558381171 0.0678710769228262 0.022 -0.229333333333333 1.08290757800535 15.5442590337075 0.022 -0.229333333333333 0.779308193223035 0.0278980659522558 0.294547550095964 -2.97913320121371 Q6P995 FAM171B Q6P995.S779.p_FAM171B Q6P995_S779s _1_1_779_779 Q6P995 Q6P995 Protein FAM171B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12900.12900.5 7.95 7.95 1.133 2 1 1 0 568.8891 2760.4503 S779s TMT10 762 (R) HILDGGSGVIMEHPGEEsPGRK (S) HILDGGS(0.0)GVIMEHPGEES(0.99)PGRK K:TMT10,s:Phosphorylated S FAM171B 92578.6 1 1 4569.1 29.66 HUMAN 1 1.0829 -15.5443 MEIDKRGSPTPGTRS-p P27987;S280-p MEIDKRGSPTPGTRS 0.736926628232361 0.0763407610675062 -0.0496666666666667 0.207333333333333 2.51132450555889 14.8257753844587 -0.0496666666666667 0.207333333333333 0.560876894453264 0.0329171678147418 -0.619280593190037 2.84400917264338 P27987 ITPKB P27987.S280.p_ITPKB P27987_S280s _1_1_280_280 P27987 P27987|P27987-2 Inositol-trisphosphate 3-kinase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3297.3297.3 7.45 7.45 1.272 3 1 1 0 413.2134 1157.6588 S280s TMT10 278 (K) RGsPTPGTR (S) RGS(0.99)PT(0.0)PGT(0.0)R s:Phosphorylated S ITPKB 103230.2 2 9 424.1 319.61 HUMAN 1 -2.5113 14.8258 MEIKLLHSPMTKIAD-p Q9NVN8;S465-p MEIKLLHSPMTKIAD 0.735011142641634 0.00278494099914611 -0.0643333333333333 -0.713333333333333 2.53185532260216 38.6942623729931 -0.0643333333333334 -0.713333333333333 0.558231665092173 0.000135074622572439 -0.623610228717091 -9.55929089595522 Q9NVN8 GNL3L Q9NVN8.S465.p_GNL3L Q9NVN8_S465s _1_1_465_465 Q9NVN8 Q9NVN8 Guanine nucleotide-binding protein-like 3-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13795.13795.3 12.94 12.94 3.719 2 1 1 0 488.9402 1384.8387 S465s TMT10 462 (K) LLHsPMTK (I) LLHS(0.99)PMT(0.0)K K:TMT10,s:Phosphorylated S GNL3L 66256.7 10 3 3327.1 53.86 HUMAN 1 -2.5319 -38.6943 MEIQVPPSPTDVAKS-p Q5T5U3;S252-p MEIQVPPSPTDVAKS 0.711022885496465 0.213740919505277 0.0636666666666667 -0.125666666666667 2.78632486369792 8.81643987515344 0.0636666666666667 -0.125666666666667 0.526462587117447 0.131327601463894 0.676667955553268 -1.77596365353993 Q5T5U3 ARHGAP21 Q5T5U3.S252.p_ARHGAP21 Q5T5U3_S252s _1_1_252_252 Q5T5U3 Q5T5U3|A0A087WW76|A0A1B0GV73|F8W9U9|Q5T5U3-3 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22695.22947.3 15.71 12.67 2.906 2 1 1 0 684.0283 1970.1033 S252s TMT10 245 (R) MEIQVPPsPTDVAK (S) MEIQVPPS(0.99)PT(0.0)DVAK K:TMT10,s:Phosphorylated S ARHGAP21 218696.3 7 5 148.1 512.52 HUMAN 1 2.7863 -8.8164 MEITIRNSPYRREDS-p P21127;S65-p MEITIRNSPYRREDS 0.905351305049427 0.757808340414781 0.0306666666666667 0.068 0.850583307045702 1.66280453607111 0.0306666666666667 0.0679999999999999 0.822132220792845 0.681898203689226 0.235967124729132 0.432714195484189 P21127 CDK11B P21127.S65.p_CDK11B P21127_S65s _1_1_65_65 P21127 P21127|J3QR44|A0A0D9SEN2|A0A0D9SER5|P21127-2|B7ZVY7|P21127-3|J3QR29|P21127-6|Q9UQ88-9|A0A087X1I0|A0A087WYI9|P21127-8|A0A0D9SEI3|P21127-9 Cyclin-dependent kinase 11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11281.11281.4 11.67 11.67 3.814 3 1 1 0 461.9904 1764.974 S65s TMT10 58 (R) MEITIRNsPYRR (E) MEIT(0.0)IRNS(0.99)PY(0.0)RR s:Phosphorylated S CDK11B 92876.5 4 2 421.1 320.22 HUMAN 1 0.8506 1.6628 MEKAAEVYTRLKSRV-p Q7Z4V5-3;Y543-p MEKAAEVYTRLKSRV 0.419663834440251 0.0772237162166262 0.122 0.297666666666667 6.95950282652981 14.7565944562369 0.122 0.297666666666667 0.201395479103282 0.0334457203656593 1.45392251863839 2.83111294127602 Q7Z4V5 HDGFRP2 Q7Z4V5.3.Y543.p_HDGFRP2 Q7Z4V5-3_Y543y _1_1_543_543 Q7Z4V5-3 Q7Z4V5-3|Q7Z4V5-4|Q7Z4V5-2 Isoform 3 of Hepatoma-derived growth factor-related protein 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.6774.6774.2 7.72 3.15 3.379 2 1 1 0 559.7719 1038.5781 Y543y TMT10 539 (K) AAEVyTR (L) AAEVY(0.99)T(0.0)R y:Phosphorylated Y HDGFL2 74986.2 2 1 419.1 7.72 HUMAN 1 6.9595 14.7566 MEKEMDNSQRECIKD-p Q13315;S2242-p MEKEMDNSQRECIKD 0.96308152220216 0.0466683725535521 -0.0106666666666667 0.278333333333333 0.314330132328117 17.8050951578378 -0.0106666666666667 0.278333333333333 0.930179977190177 0.0165764101604131 -0.0917732322182249 3.42016534416565 Q13315 ATM Q13315.S2242.p_ATM Q13315_S2242s _1_1_2242_2242 Q13315 Q13315 Serine-protein kinase ATM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20412.20412.4 14.72 9.88 9.77 2 1 1 0 687.6085 2667.4413 S2242s TMT10 2238 (K) EMDNsQRECIKDILTK (H) EMDNS(0.99)QRECIKDILT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATM 355759 1 7 2613.1 76.72 HUMAN 1 -0.3143 17.8051 MELHGEGSSSGKATG-p P61247;S236-p MELHGEGSSSGKATG 0.739253504813831 0.862895201571829 0.0493333333333333 -0.0213333333333333 2.48668238137053 0.903426454330648 0.0493333333333333 -0.0213333333333333 0.564068388722171 0.812189469971703 0.614073878816002 -0.249451136375355 P61247 RPS3A P61247.S236.p_RPS3A P61247_S236s_1_1_236_236 P61247 P61247|D6RAT0|D6R9B6 40S ribosomal protein S3a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10340.10340.4 11.08 11.08 1.281 5 1 1 0 737.1218 2849.4918 M229m S236s TMT10 228 (K) LmELHGEGsSSGKATGDETGAK (V) LM(1.0)ELHGEGS(0.99)S(0.0)S(0.0)GKAT(0.0)GDET(0.0)GAK K:TMT10,m:Oxidized methionine,s:Phosphorylated S RPS3A 30172.6 10 1 2290.1 89.54 HUMAN 1 2.4867 -0.9034 MELKAFGSGIDIKPG-p Q9Y520-7;S2667-p MELKAFGSGIDIKPG 0.474992641256242 0.0603114284052269 -0.095 -0.218333333333333 5.95145556521084 16.2467454988801 -0.095 -0.218333333333333 0.254012122529827 0.0237315142357743 -1.27591095666056 -3.11347035696042 Q9Y520 PRRC2C Q9Y520.7.S2667.p_PRRC2C Q9Y520-7_S2667s _1_1_2667_2667 Q9Y520-7 Q9Y520-7|Q9Y520-5|E7EPN9|Q9Y520-4|Q9Y520-6 Isoform 7 of Protein PRRC2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18755.18755.3 12.75 12.75 1.546 2 1 1 0 688.3685 1983.1225 S2667s Hydrogen 2664 (K) AFGsGIDIKPGTPPIAGR (S) AFGS(0.99)GIDIKPGT(0.0)PPIAGR K:TMT10-Lys-Only,s:Phosphorylated S PRRC2C 317703.2 2 112 36.3 882.05 HUMAN 1 -5.9515 -16.2467 MELLNEKSPSSQETH-p Q8TB45;S235-p MELLNEKSPSSQETH 0.437426993382616 0.367763142305595 -0.112333333333333 0.0916666666666667 6.61500026970292 5.76143449283291 -0.112333333333333 0.0916666666666667 0.218021826179135 0.265372887945262 -1.39343803843982 1.24166164875338 Q8TB45 DEPTOR Q8TB45.S235.p_DEPTOR Q8TB45_S235s _1_1_235_235 Q8TB45 Q8TB45|Q8TB45-2 DEP domain-containing mTOR-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24048.24048.5 14.58 11.21 1.287 5 1 1 0 723.5734 3533.8699 S235s TMT10 227 (R) LMELLNEKsPSSQETHDSPFCLRK (Q) LMELLNEKS(0.99)PS(0.0)S(0.0)QET(0.0)HDS(0.0)PFCLRK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DEPTOR 46806.5 2 3 1526.1 133.99 HUMAN 1 -6.615 5.7614 MELQPPVSPQQSECN-p Q15633;S152-p MELQPPVSPQQSECN 0.710375901939849 0.700666011409071 -0.05 -0.037 2.79296666375276 2.12398354392625 -0.05 -0.0371175840940889 0.525658066918955 0.613199293216002 -0.678038375335297 -0.536023642511837 Q15633 TARBP2 Q15633.S152.p_TARBP2 Q15633_S152s _1_1_152_152 Q15633 Q15633|Q15633-2|F8VW32 RISC-loading complex subunit TARBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.36454.36656.4 18.99 15.11 1.124 3 1 1 0 956.9914 3744.9705 S152s TMT10 142 (R) SPPMELQPPVsPQQSECNPVGALQELVVQK (G) S(0.0)PPMELQPPVS(0.99)PQQS(0.0)ECNPVGALQELVVQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TARBP2 39666.2 23 4 2078.1 98.8 HUMAN 1 -2.793 -2.124 MELRRDSSESQLAST-p Q5BIX2;S67-p MELRRDSSESQLAST 0.736796537640786 0.0377703164448426 0.05 0.481333333333333 2.51323623538141 19.1110089463006 0.05 0.481333333333333 0.560630055230502 0.0122715410747383 0.619684068442608 3.68745085804353 Q5BIX2 C18orf25 Q5BIX2.S67.p_C18orf25 Q5BIX2_S66sS67s_2_2_66_67 Q5BIX2 Q5BIX2|Q96B23|Q96B23-2|A0A087WVF1 Chromosome 18 open reading frame 25, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7311.7311.3 13.42 13.42 2.204 8 2 2 0 847.7087 2381.1742 S66s S67s Hydrogen 64 (R) RDssESQLASTESDKPTTGR (V) RDS(0.99)S(0.99)ES(0.0)QLAS(0.0)T(0.0)ES(0.0)DKPT(0.0)T(0.0)GR K:TMT10-Lys-Only,s:Phosphorylated S C18orf25 43622.5 1 5 1972.1 104.68 HUMAN 1 2.5132 19.111 MENCLGESRHEVEKS-p Q9UHB6-4;S168-p MENCLGESRHEVEKS 0.108274227113564 0.669069046411955 -0.432666666666667 0.069 20.2658645990556 2.38624306188421 -0.432666666666667 0.069 0.00940618551841018 0.577265620880376 -3.9362415118109 0.592661673056646 Q9UHB6 LIMA1 Q9UHB6.4.S168.p_LIMA1 Q9UHB6-4_S168s _1_1_168_168 Q9UHB6-4 Q9UHB6-4|F8VRN8 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7633.7633.5 12.51 12.51 99 1 1 1 0 523.4693 2533.347 S168s TMT10 160 (K) KMENCLGEsRHEVEK (S) KMENCLGES(1.0)RHEVEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S LIMA1 85678.4 1 9 42.1 822.82 HUMAN 1 -20.2659 2.3862 MEPERRDSQDGSSYR-p Q14847-2;S146-p MEPERRDSQDGSSYR 0.170635936166243 0.0138811738705875 -0.275666666666667 0.398 15.3266422085966 25.7831083812804 -0.275666666666667 0.398 0.0293316017103342 0.00264051817947912 -2.93994066035879 5.23808140877872 Q14847 LASP1 Q14847.2.S146.p_LASP1 Q14847-2_S146s _1_1_146_146 Q14847-2 Q14847-2|Q14847-3 Isoform 2 of LIM and SH3 domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7297.7297.4 18.69 18.69 2.844 5 1 1 0 699.2994 2714.2096 S146s TMT10 131 (R) MGPSGGEGMEPERRDsQDGSSYR (R) MGPS(0.0)GGEGMEPERRDS(0.99)QDGS(0.0)S(0.0)Y(0.0)R s:Phosphorylated S LASP1 36812.2 17 7 1322.1 154.29 HUMAN 1 -15.3266 25.7831 MEPLKGTTPLMQKI_-p O60716-3;T933-p MEPLKGTTPLMQKI_ 0.269681086224078 0.633669511805909 0.158333333333333 -0.0493333333333333 10.7836649100626 2.69391766072472 0.158333333333333 -0.0493333333333333 0.0834898169734996 0.537784441893458 2.11825091605493 -0.657440014156183 O60716 CTNND1 O60716.3.T933.p_CTNND1 O60716-3_T933t_1_1_933_933 O60716-3 O60716-3|O60716-5|O60716-7|O60716-8|O60716-11|O60716-16|O60716-19|O60716-21|O60716-23|O60716-24|O60716-27|O60716-29|O60716-31|O60716-32|O60716-13|O60716-15 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26474.26474.4 14.5 14.5 1.144 3 1 1 0 729.3885 2818.5662 M926m T933t TMT10 920 (R) SGDLGDmEPLKGTtPLMQKI (-) S(0.0)GDLGDM(0.99)EPLKGT(0.0)T(0.99)PLM(0.0)QKI K:TMT10,m:Oxidized methionine,t:Phosphorylated T CTNND1 105545.3 19 42 21.1 1014.17 HUMAN 1 10.7837 -2.6939 MEQKKRVSMILQSPA-p P35611-3;S59-p MEQKKRVSMILQSPA 0.755687201828913 0.0901618401314303 -0.0473333333333333 0.233666666666667 2.32608138593833 13.8275765125967 -0.0473333333333334 0.233666666666667 0.585317974985161 0.0414230762948237 -0.579862590416047 2.65974375253724 P35611 ADD1 P35611.3.S59.p_ADD1 P35611-3_S59s _1_1_59_59 P35611-3 P35611-3|E7ENY0|P35611-4|P35611-6 Isoform 3 of Alpha-adducin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34375.34375.5 27.93 27.93 3.828 3 1 1 0 831.4478 4073.2408 S59s TMT10 56 (K) KRVsMILQSPAFCEELESMIQEQFKK (G) KRVS(0.99)MILQS(0.0)PAFCEELES(0.0)MIQEQFKK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ADD1 84872.1 2 2 264.1 396.09 HUMAN 1 -2.3261 13.8276 MERLKKLSVPTSDEE-p Q8NE71;S105-p MERLKKLSVPTSDEE 0.0796409010099057 0.368292556023083 0.344333333333333 0.100333333333333 23.4674559394494 5.75193217482336 0.344333333333333 0.100333333333333 0.00450043409336059 0.265954156731971 4.6658113155403 1.23995985634835 Q8NE71 ABCF1 Q8NE71.S105.p_ABCF1 Q8NE71_S105sT108tS109s_3_3_105_109 Q8NE71 Q8NE71|Q8NE71-2 ATP-binding cassette sub-family F member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17059.17059.5 12.28 9.56 99 3 3 3 0 559.2691 2552.3972 S105s T108t S109s Hydrogen 103 (K) KLsVPtsDEEDEVPAPKPR (G) KLS(1.0)VPT(1.0)S(1.0)DEEDEVPAPKPR K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T ABCF1 96380.4 19 11 203.1 449.36 HUMAN 1 23.4675 5.7519 MESQLDGSLISRRAV-p Q92692-2;S470-p MESQLDGSLISRRAV 0.990219796343462 0.205625757034846 0.00433333333333333 -0.266333333333333 0.0880363115325495 9.03870873251671 0.00433333333333332 -0.266333333333333 0.979932967803233 0.124775444809401 0.0263364475899668 -1.81440811554257 Q92692 PVRL2 Q92692.2.S470.p_PVRL2 Q92692-2_S470s _1_1_470_470 Q92692-2 Q92692-2 Isoform Alpha of Nectin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.35102.35102.4 22.87 17.97 2.631 3 1 1 0 748.3662 2910.479 S470s TMT10 450 (K) GLMLPPPPALEDDMESQLDGsLISR (R) GLMLPPPPALEDDMES(0.0)QLDGS(0.99)LIS(0.0)R s:Phosphorylated S NECTIN2 51700.6 1 2 4295.1 34.06 HUMAN 1 0.088 -9.0387 MESTQDRSREDMIDI-p P20340-2;S184-p MESTQDRSREDMIDI 0.361700229597547 0.0357206717527479 0.152666666666667 0.305666666666667 8.20750676651795 19.4791775557442 0.152666666666667 0.305666666666667 0.151094732229102 0.0112741093916867 1.67113956301945 3.76465081811685 P20340 RAB6A P20340.2.S184.p_RAB6A P20340-2_S184s _1_1_184_184 P20340-2 P20340|P20340-2|P20340-4|P20340-3 Isoform 2 of Ras-related protein Rab-6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21860.21860.3 13.26 11.77 1.138 3 1 1 0 1024.5142 2991.5644 S184s TMT10 170 (R) VAAALPGMESTQDRsREDMIDIK (L) VAAALPGMES(0.0)T(0.0)QDRS(0.99)REDMIDIK K:TMT10,s:Phosphorylated S RAB6A 23662.4 4 5 2158.1 95.2 HUMAN 1 8.2075 19.4792 METGIAETPEGRRTS-p O60341;T104-p METGIAETPEGRRTS 0.508161401387114 0.0650760469701073 0.0993333333333333 -0.464666666666667 5.42528551700506 15.7893396824863 0.0993333333333333 -0.464666666666667 0.286728886601584 0.0263673225394717 1.18145451483057 -3.02574180699414 O60341 KDM1A O60341.T104.p_KDM1A O60341_S69sT104t_2_2_69_104 O60341 O60341|O60341-2 Lysine-specific histone demethylase 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19456.19456.5 20.98 20.98 1.115 7 2 2 0 1076.5516 5218.7774 S69s T104t TMT10 62 (R) KKEPPRAsPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAEtPEGR (R) KKEPPRAS(0.99)PPGGLAEPPGS(0.0)AGPQAGPT(0.0)VVPGS(0.0)AT(0.0)PMET(0.0)GIAET(0.99)PEGR K:TMT10,s:Phosphorylated S,t:Phosphorylated T KDM1A 93414.4 2 12 232.1 420.78 HUMAN 1 5.4253 -15.7893 METGTGLTPVMTQAL-p Q96HE9;T326-p METGTGLTPVMTQAL 0.732651492896551 0.458466167507467 -0.086 -0.0886666666666666 2.56003200147625 4.51529548913794 -0.086 -0.0886666666666666 0.554621626151164 0.353565964046813 -0.62953998077365 -1.01424512022801 Q96HE9 PRR11 Q96HE9.T326.p_PRR11 Q96HE9_T326t _1_1_326_326 Q96HE9 Q96HE9 Proline-rich protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26849.26849.3 14.39 14.39 2.493 4 1 1 0 753.3625 2178.1096 T326t TMT10 317 (K) ENMETGTGLtPVMTQALR (R) ENMET(0.0)GT(0.0)GLT(0.99)PVMT(0.0)QALR t:Phosphorylated T PRR11 40597.8 1 6 1094.1 178.6 HUMAN 1 -2.56 -4.5153 METKKVASPGWTCWE-p Q9HCE3;S1022-p METKKVASPGWTCWE 0.699674004566978 0.0517372165937672 -0.0626666666666667 -0.238333333333333 2.91404647435637 17.1642174399358 -0.0626666666666667 -0.238333333333333 0.511205305621186 0.0192122511825788 -0.702899436520469 -3.29250991181639 Q9HCE3 ZNF532 Q9HCE3.S1022.p_ZNF532 Q9HCE3_S1022s _1_1_1022_1022 Q9HCE3 Q9HCE3 Zinc finger protein 532 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30622.30622.3 21.26 21.26 3.604 2 1 1 0 871.3649 2532.113 S1022s TMT10 1020 (K) VAsPGWTCWECDCLFMQR (D) VAS(0.99)PGWT(0.0)CWECDCLFMQR C:Carbamidomethylation,s:Phosphorylated S ZNF532 144089.8 4 10 397.1 329.01 HUMAN 1 -2.914 -17.1642 METNRVESVEPSENE-p Q9H307;S413-p METNRVESVEPSENE 0.690001442222247 0.00390851163108543 -0.121 0.716 3.01989226568956 35.5294341840438 -0.121 0.716 0.498896863312144 0.000279934600570062 -0.724449753448944 8.29117309049732 Q9H307 PNN Q9H307.S413.p_PNN Q9H307_S413s _1_1_413_413 Q9H307 Q9H307|Q9H307-2 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13565.13565.4 23.42 22.78 3.495 4 1 1 0 867.1699 3385.6946 S413s TMT10 398 (K) HVIADQEVMETNRVEsVEPSENEASK (E) HVIADQEVMET(0.0)NRVES(0.99)VEPS(0.0)ENEAS(0.0)K K:TMT10,s:Phosphorylated S PNN 81726.4 4 6 180.1 480.36 HUMAN 1 -3.0199 35.5294 METSRSPSPQFAPQK-p Q13796;S1173-p METSRSPSPQFAPQK 0.973859938269657 0.647277687056677 0.00499999999999999 0.0466666666666667 0.225767371706001 2.57531202677621 0.005 0.0466666666666666 0.949343241255129 0.552673698670017 0.0665321189313702 0.632667900341531 Q13796 SHROOM2 Q13796.S1173.p_SHROOM2 Q13796_S1173s _1_1_1173_1173 Q13796 Q13796|F5H3B6 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12799.12799.2 8.95 4.98 2.021 2 1 1 0 812.9296 1544.8837 S1173s TMT10 1171 (R) SPsPQFAPQK (L) S(0.0)PS(0.99)PQFAPQK K:TMT10,s:Phosphorylated S SHROOM2 177605.1 2 23 90.1 622.62 HUMAN 1 0.2258 2.5753 MEVLSPASPGGLSDG-p Q6P1R3;S27-p MEVLSPASPGGLSDG 0.338303322331957 0.529793584650787 0.175333333333333 0.0686666666666667 8.75934723101162 3.70981693458302 0.175333333333333 0.0686666666666667 0.133065440777594 0.425616353493645 1.76670561251594 0.861099622162337 Q6P1R3 MSANTD2 Q6P1R3.S27.p_MSANTD2 Q6P1R3_S27sS32s_2_2_27_32 Q6P1R3 Q6P1R3|Q6P1R3-3|E9PPE2|B4E1M0 Myb/SANT-like DNA-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24971.24971.3 17.08 15.69 2.682 7 2 2 0 986.4471 2797.3876 S27s S32s TMT10 20 (K) MEVLSPAsPGGLsDGNPSLSDPSTPR (G) MEVLS(0.0)PAS(0.99)PGGLS(0.99)DGNPS(0.0)LS(0.0)DPS(0.0)T(0.0)PR s:Phosphorylated S MSANTD2 61945.8 2 7 1991.1 103.76 HUMAN 1 8.7593 3.7098 MFAICGVSDSKFRTI-p P12081;S227-p MFAICGVSDSKFRTI 0.533081136462873 0.115548624340071 -0.127 0.267666666666667 5.05640773963714 12.3647024400642 -0.127 0.267666666666667 0.312147043621236 0.0580135919583862 -1.11438515507163 2.39595625553652 P12081 HARS P12081.S227.p_HARS P12081_S227s _1_1_227_227 P12081 P12081|P12081-4|P12081-2|P12081-3|B3KWE1|B4DDD8|B4E1C5 Histidine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.33010.33010.3 18.81 18.81 2.818 2 1 1 0 717.6924 2071.0968 S227s TMT10 216 (R) ILDGMFAICGVsDSK (F) ILDGMFAICGVS(0.99)DS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HARS 57980 3 4 2178.1 94.48 HUMAN 1 -5.0564 12.3647 MFARKHESPLLVTKS-p Q92622;S197-p MFARKHESPLLVTKS 0.545454914252454 0.620818287438516 -0.106 0.0603333333333334 4.85879731066742 2.81517775446505 -0.106 0.0603333333333334 0.326678286486167 0.522976560586393 -1.07811731518493 0.682523672538612 Q92622 KIAA0226 Q92622.S197.p_KIAA0226 Q92622_S197s _1_1_197_197 Q92622 Q92622|Q92622-2|Q92622-3|E9PEM3 Run domain Beclin-1-interacting and cysteine-rich domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11407.11407.3 12.72 12.72 1.436 2 1 1 0 640.3828 1839.1671 S197s TMT10 194 (R) KHEsPLLVTK (S) KHES(0.99)PLLVT(0.0)K K:TMT10,s:Phosphorylated S RUBCN 110331.4 3 1 919.1 200.35 HUMAN 1 -4.8588 2.8152 MFISDNESFNPSLWE-p Q96RT1-8;S444-p MFISDNESFNPSLWE 0.219245224336186 0.234088737656759 0.192 0.149333333333333 12.692486871472 8.30369596957034 0.192 0.149333333333333 0.0537961644919271 0.147785016032837 2.45579953850784 1.68725059774131 Q96RT1 ERBB2IP Q96RT1.8.S444.p_ERBB2IP Q96RT1-8_S444s _1_1_444_444 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27604.27604.3 18.76 18.77 1.244 4 1 1 0 1113.8556 3259.5982 S444s TMT10 433 (R) TEDVMFISDNEsFNPSLWEEQRK (Q) T(0.0)EDVMFIS(0.0)DNES(0.99)FNPS(0.0)LWEEQRK K:TMT10,s:Phosphorylated S ERBIN 159762.8 2 4 81.1 633.5 HUMAN 1 12.6925 8.3037 MFPKTSVSPAPDKTK-p O75362;S848-p MFPKTSVSPAPDKTK 0.977264900900884 0.00701753853914177 0.00466666666666666 -0.574666666666667 0.195804069177634 30.8598270386003 0.00466666666666666 -0.574666666666667 0.955915696799146 0.000820384216164884 0.0578876336443843 -6.68705240987752 O75362 ZNF217 O75362.S848.p_ZNF217 O75362_S848s _1_1_848_848 O75362 O75362 Zinc finger protein 217 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8401.8401.2 13.79 13.79 2.003 3 1 1 0 720.3809 1359.7884 S848s TMT10 845 (K) TSVsPAPDK (T) T(0.0)S(0.0)VS(0.99)PAPDK K:TMT10,s:Phosphorylated S ZNF217 117152.8 5 14 394.1 330.8 HUMAN 1 0.1958 -30.8598 MFPRNYVTPVNRNV_-p P62993;T211-p MFPRNYVTPVNRNV_ 0.672441969307206 0.343322138439678 -0.0636666666666667 0.104666666666667 3.22711730076088 6.15096202570226 -0.0636666666666667 0.104666666666667 0.475650842054477 0.24260726250388 -0.766176664635465 1.31109266081293 P62993 GRB2 P62993.T211.p_GRB2 P62993_T211t _1_1_211_211 P62993 P62993|P62993-2 Growth factor receptor-bound protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7635.7635.2 10.6 10.6 6.21 2 1 1 0 636.3194 1191.6683 T211t TMT10 208 (R) NYVtPVNR (N) NY(0.0)VT(0.99)PVNR t:Phosphorylated T GRB2 25320 1 1 6610.1 10.6 HUMAN 1 -3.2271 6.151 MFTVSDHTPEQRGIF-p O95613;T191-p MFTVSDHTPEQRGIF 0.833124060837715 0.0105907835111407 -0.0346666666666667 -0.556 1.5279819110306 27.7000859779683 -0.0346666666666667 -0.556 0.703399100965265 0.00169821003239524 -0.401533035791985 -5.75355181588223 O95613 PCNT O95613.T191.p_PCNT O95613_T191t _1_1_191_191 O95613 O95613|O95613-2 Pericentrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11346.11346.3 14.87 14.87 2.712 3 1 1 0 605.2747 1733.8478 T191t TMT10 183 (R) GMFTVSDHtPEQR (G) GMFT(0.0)VS(0.0)DHT(0.99)PEQR t:Phosphorylated T PCNT 380826.2 1 4 222.1 428 HUMAN 1 -1.528 -27.7001 MFVGFTPSPVAQPHP-p Q13492;S474-p MFVGFTPSPVAQPHP 0.612415424606591 0.397507286408576 -0.0673333333333334 -0.0863333333333333 3.94729523863611 5.32608389554564 -0.0673333333333334 -0.0863333333333333 0.402967922324569 0.293353727158154 -0.907041566442761 -1.16324480633452 Q13492 PICALM Q13492.S474.p_PICALM Q13492_S474s_1_1_474_474 Q13492 Q13492|Q13492-5 Phosphatidylinositol-binding clathrin assembly protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30709.30709.5 13.03 8.98 1.13 6 1 1 0 857.2255 4200.1265 S474s N486n N495n TMT10 462 (R) TPTHEMFVGFTPsPVAQPHPSAGLnVDFESVFGnK (S) T(0.0)PT(0.0)HEMFVGFT(0.0)PS(0.99)PVAQPHPS(0.0)AGLN(1.0)VDFES(0.0)VFGN(1.0)K K:TMT10,s:Phosphorylated S,n:Deamidated PICALM 70924.4 2 4 2544.1 79.1 HUMAN 1 -3.9473 -5.3261 MGDSNISSPGLQPST-p Q9NPI6;S180-p MGDSNISSPGLQPST 0.974486381113699 0.454936873030713 0.00499999999999999 0.0946666666666667 0.21872123349363 4.55988599365607 0.00499999999999998 0.0946666666666667 0.950884737474172 0.349954353535299 0.0645041510412163 1.02255816881119 Q9NPI6 DCP1A Q9NPI6.S180.p_DCP1A Q9NPI6_S180s_1_1_180_180 Q9NPI6 Q9NPI6 mRNA-decapping enzyme 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21069.21069.4 20.61 18.93 1.107 12 1 1 0 1406.9218 5543.6997 S180s N191n TMT10 164 (R) AKDEYERNQMGDSNISsPGLQPSTQLSnLGSTETLEEMPSGSQDK (S) AKDEY(0.0)ERN(0.0)QMGDS(0.0)N(0.0)IS(0.0)S(0.99)PGLQPS(0.0)T(0.0)QLS(0.0)N(0.99)LGS(0.0)T(0.0)ET(0.0)LEEMPS(0.0)GS(0.0)QDK K:TMT10,s:Phosphorylated S,n:Deamidated DCP1A 63479.5 20 3 344.1 352.95 HUMAN 1 0.2187 4.5599 MGDSTSQSPPIKRSC-p Q9NR19-2;S267-p MGDSTSQSPPIKRSC 0.807677513163485 0.97143340895646 0.034 0.00366666666666669 1.78226776578649 0.178602415787369 0.034 0.00366666666666669 0.663396572583806 0.959709421749445 0.460024928076815 0.0528954417493224 Q9NR19 ACSS2 Q9NR19.2.S267.p_ACSS2 Q9NR19-2_S267s _1_1_267_267 Q9NR19-2 Q9NR19-2 Isoform 2 of Acetyl-coenzyme A synthetase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17936.17936.2 16.6 16.6 2.093 4 1 1 0 1078.5397 2076.1047 S267s TMT10 256 (R) AELGMGDSTSQsPPIK (R) AELGMGDS(0.0)T(0.0)S(0.0)QS(0.99)PPIK K:TMT10,s:Phosphorylated S ACSS2 81170 14 3 3144.1 59.44 HUMAN 1 1.7823 0.1786 MGFGDPLSPLQSMAA-p Q9UHX1;S112-p MGFGDPLSPLQSMAA 0.277415540108001 0.254618354917776 0.193 0.113 10.5348595254718 7.82585270924289 0.193 0.113 0.0884125766188594 0.164973705427394 2.07480670990142 1.60443855311635 Q9UHX1 PUF60 Q9UHX1.S112.p_PUF60 Q9UHX1_S112s_1_1_112_112 Q9UHX1 Q9UHX1|Q9UHX1-5|Q9UHX1-3 Poly(U)-binding-splicing factor PUF60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30665.30665.4 25.64 25.64 1.245 5 1 1 0 1059.7728 4140.099 M105m S112s TMT10 86 (K) QTIAHQQQQLTNLQMAAVTmGFGDPLsPLQSMAAQR (Q) Q(0.0)T(0.0)IAHQQQQLT(0.0)N(0.0)LQM(0.0)AAVT(0.0)M(0.99)GFGDPLS(0.99)PLQS(0.0)M(0.0)AAQR m:Oxidized methionine,s:Phosphorylated S PUF60 60045.6 11 2 1450.1 140.84 HUMAN 1 10.5349 7.8259 MGFHRPGSGAEEESQ-p P49069;S55-p MGFHRPGSGAEEESQ 0.385631573417695 0.614677059066368 -0.118 -0.0503333333333333 7.66034342857373 2.87234610836502 -0.118 -0.0503333333333333 0.171382177766281 0.516137470593516 -1.57617771544675 -0.694267819488192 P49069 CAMLG P49069.S55.p_CAMLG P49069_S55s _1_1_55_55 P49069 P49069 Calcium signal-modulating cyclophilin ligand HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12804.12804.3 13.31 6.78 3.247 3 1 1 0 833.7415 2419.244 S55s TMT10 47 (R) IMGFHRPGsGAEEESQTK (S) IMGFHRPGS(0.99)GAEEES(0.0)QT(0.0)K K:TMT10,s:Phosphorylated S CAMLG 33237.2 3 1 4719.1 27.52 HUMAN 1 -7.6603 -2.8723 MGGFKNLSPSFSRPA-p Q1ED39;S387-p MGGFKNLSPSFSRPA 0.0511487796737011 0.00106567586669276 -0.449 -1.228 28.3639627869227 50.4035063779005 -0.449 -1.228 0.00145748374983867 9.112748032787e-06 -5.94939183272009 -15.9685324125574 Q1ED39 KNOP1 Q1ED39.S387.p_KNOP1 Q1ED39_S387s _1_1_387_387 Q1ED39 Q1ED39|H3BNU8 Lysine-rich nucleolar protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18824.18824.4 14.32 12.57 1.791 5 1 1 0 714.1355 2773.5547 S387s TMT10 385 (K) NLsPSFSRPASTIARPNMALGK (K) NLS(0.99)PS(0.0)FS(0.0)RPAS(0.0)T(0.0)IARPNMALGK K:TMT10,s:Phosphorylated S KNOP1 51759.2 4 10 660.1 251.7 HUMAN 1 -28.364 -50.4035 MGGGGGASFDRAIEM-p P52272;S618-p MGGGGGASFDRAIEM 0.912465153552009 0.929547309279547 -0.0266666666666667 -0.0133333333333333 0.775985594921191 0.448101526945858 -0.0266666666666667 -0.0133333333333333 0.836375765747489 0.901965336183858 -0.216702633403923 -0.129056343557366 P52272 HNRNPM P52272.S618.p_HNRNPM P52272_S618s _1_1_618_618 P52272 P52272|A0A087X0X3|P52272-2 Heterogeneous nuclear ribonucleoprotein M HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22884.22884.3 19.81 19.81 99 1 1 1 0 808.0349 2342.1253 S618s TMT10 607 (R) MGLAMGGGGGAsFDRAIEMER (G) MGLAMGGGGGAS(1.0)FDRAIEMER s:Phosphorylated S HNRNPM 77799.7 13 12 830.1 216.57 HUMAN 1 -0.776 -0.4481 MGGGGGGSPSPVELR-p Q9UQL6-3;S54-p MGGGGGGSPSPVELR 0.514113626120284 0.131074794896459 0.135333333333333 -0.210333333333333 5.33835225154982 11.6325977636461 0.135333333333333 -0.210333333333333 0.292526203543973 0.0686657587979785 1.16571730867354 -2.26624177201918 Q9UQL6 HDAC5 Q9UQL6.3.S54.p_HDAC5 Q9UQL6-3_S54s _1_1_54_54 Q9UQL6-3 Q9UQL6-3|Q9UQL6-2 Isoform 3 of Histone deacetylase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17346.17346.3 9.9 9.9 1.391 4 1 1 0 713.997 2060.0102 S54s TMT10 42 (R) AMPSSMGGGGGGsPSPVELR (G) AMPS(0.0)S(0.0)MGGGGGGS(0.99)PS(0.0)PVELR s:Phosphorylated S HDAC5 122845.2 2 7 1282.2 158.68 HUMAN 1 5.3384 -11.6326 MGGKEQNSPIYISRI-p Q9NUP9;S115-p MGGKEQNSPIYISRI 0.190635430939797 0.800845798271565 0.257 0.0346666666666667 14.0738714967277 1.34882575353236 0.257 0.0346666666666667 0.0391392816351931 0.733022701202081 2.70649152366688 0.359188267899412 Q9NUP9 LIN7C Q9NUP9.S115.p_LIN7C Q9NUP9_S115s_1_1_115_115 Q9NUP9 Q9NUP9|G3V1D4 Protein lin-7 homolog C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27663.27663.4 18.67 11.93 1.089 4 1 1 0 994.283 3893.145 N114n S115s TMT10 93 (R) VVELPKTEEGLGFNIMGGKEQnsPIYISR (I) VVELPKT(0.0)EEGLGFN(0.50)IMGGKEQN(0.50)S(0.99)PIY(0.0)IS(0.0)R K:TMT10,n:Deamidated,s:Phosphorylated S LIN7C 21947.7 2 1 4416.1 31.75 HUMAN 1 14.0739 1.3488 MGGRAPVSRGRDSYG-p P38159;S184-p MGGRAPVSRGRDSYG 0.564811040623116 0.304520927282507 0.200666666666667 -0.486666666666667 4.56984847110161 6.81983508362223 0.200666666666667 -0.486666666666667 0.349152497482399 0.207977566175589 1.02460559711647 -1.42905328520608 P38159 RBMX P38159.S184.p_RBMX P38159_S184s _1_1_184_184 P38159 P38159|P38159-2 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4013.4013.3 7.53 7.53 4.345 4 1 1 0 519.9195 1477.7743 S184s TMT10 173 (R) SSSGMGGRAPVsR (G) S(0.0)S(0.0)S(0.0)GMGGRAPVS(0.99)R s:Phosphorylated S RBMX 42331.1 1 13 102.1 595.29 HUMAN 1 4.5698 -6.8198 MGGRYYNSIGDIIDH-p P20936;S418-p MGGRYYNSIGDIIDH 0.727219502336973 0.0242678686582734 -0.0536666666666667 0.309666666666667 2.62286432281258 22.0079795509422 -0.0536666666666667 0.309666666666667 0.546655305830452 0.00629799113375475 -0.642712640995377 4.31918472586785 P20936 RASA1 P20936.S418.p_RASA1 P20936_S418s _1_1_418_418 P20936 P20936|E9PGC0|P20936-4|P20936-2|P20936-3 Ras GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22636.22636.4 13.88 13.88 4.403 4 1 1 0 574.5461 2215.1912 S418s TMT10 415 (R) YYNsIGDIIDHYRK (E) Y(0.0)Y(0.0)NS(0.99)IGDIIDHY(0.0)RK K:TMT10,s:Phosphorylated S RASA1 117314 2 1 4336.1 33.28 HUMAN 1 -2.6229 22.008 MGITGNTSPFGQPFS-p Q92793;S274-p MGITGNTSPFGQPFS 0.247909968506713 0.00643036349952778 0.212333333333333 0.521 11.5725649700052 31.521405865339 0.212333333333333 0.521 0.0696215203666698 0.000704464987960521 2.25674077323263 6.89703743738343 Q92793 CREBBP Q92793.S274.p_CREBBP Q92793_S274s_1_1_274_274 Q92793 Q92793|Q92793-2 CREB-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26030.26030.4 13.35 13.35 1.201 6 1 1 0 972.7294 3791.9249 S274s M288m TMT10 267 (K) MGITGNTsPFGQPFSQAGGQPmGATGVNPQLASK (Q) M(0.0)GIT(0.0)GNT(0.0)S(0.99)PFGQPFS(0.0)QAGGQPM(0.99)GAT(0.0)GVNPQLAS(0.0)K K:TMT10,s:Phosphorylated S,m:Oxidized methionine CREBBP 268199.1 5 14 591.1 264.37 HUMAN 1 11.5726 31.5214 MGLPGSDSQKELA__-p Q9P206-3;S1041-p MGLPGSDSQKELA__ 0.369859264395465 0.404038911807449 0.174333333333333 0.0796666666666667 8.01098403028349 5.2369735766724 0.174333333333333 0.0796666666666667 0.158088979854786 0.299435055202757 1.63706600041361 1.14707153142582 Q9P206 KIAA1522 Q9P206.3.S1041.p_KIAA1522 Q9P206-3_S1041s _1_1_1041_1041 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15008.15008.3 10.34 11.13 2.49 2 1 1 0 519.9296 1477.8085 S1041s TMT10 1034 (K) MGLPGSDsQK (E) MGLPGS(0.0)DS(0.99)QK K:TMT10,s:Phosphorylated S KIAA1522 108782.6 3 40 62.1 704.36 HUMAN 1 8.011 5.237 MGMCGSRSADNLSCP-p P28290;S1055-p MGMCGSRSADNLSCP 0.645966449044028 0.870006215796507 0.0653333333333333 0.0186666666666667 3.55286155448107 0.852408646483856 0.0653333333333333 0.0186666666666667 0.441279593623328 0.821786751276916 0.830631746356352 0.23641277201778 P28290 SSFA2 P28290.S1055.p_SSFA2 P28290_S1055s _1_1_1055_1055 P28290 P28290|P28290-3|P28290-2|E7EUL7 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36835.36835.3 24.51 24.51 3.532 6 1 1 0 1240.2643 3638.8156 S1055s TMT10 1055 (R) sADNLSCPSPLNVMEPVTELMQEQSYLK (S) S(0.99)ADNLS(0.0)CPS(0.0)PLNVMEPVT(0.0)ELMQEQS(0.0)Y(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SSFA2 139638.7 10 26 73.1 652.35 HUMAN 1 3.5529 0.8524 MGPGPRLSPSTEPRS-p J3QLM1;S465-p MGPGPRLSPSTEPRS 0.241474199044626 0.0386745972221711 0.180666666666667 -0.258666666666667 11.8002342394908 18.9683879751522 0.180666666666667 -0.258666666666667 0.0660657814047278 0.0126812248330553 2.29695105369971 -3.65776979134797 J3QLM1 NotFound J3QLM1.S465.p_NotFound J3QLM1_S465s _1_1_465_465 J3QLM1 J3QLM1 StAR-related lipid transfer protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7743.7743.4 8.01 8.01 1.192 4 1 1 0 525.7638 2020.0596 S465s TMT10 455 (R) TAHMGPGPRLsPSTEPR (S) T(0.0)AHMGPGPRLS(0.99)PS(0.0)T(0.0)EPR s:Phosphorylated S STARD3 53053.7 1 2 4291.1 34.11 HUMAN 1 11.8002 -18.9684 MGPPGNWSPRPPRAG-p Q13501;S207-p MGPPGNWSPRPPRAG 0.424570213789118 0.021045775789504 0.119333333333333 -0.425 6.85769536808079 22.9317780257872 0.119333333333333 -0.425 0.206172369961676 0.00509122390842399 1.43607982167276 -4.53326055152763 Q13501 SQSTM1 Q13501.S207.p_SQSTM1 Q13501_S207s _1_1_207_207 Q13501 Q13501|E7EMC7|Q13501-2 Sequestosome-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20858.21079.4 21.44 21.44 99 1 1 1 0 737.8454 2868.3891 S207s TMT10 190 (K) HGHFGWPGWEMGPPGNWsPRPPR (A) HGHFGWPGWEMGPPGNWS(1.0)PRPPR s:Phosphorylated S SQSTM1 48485.1 6 4 541.1 276.49 HUMAN 1 6.8577 -22.9318 MGPTRAGSEECVFYT-p Q765P7;S612-p MGPTRAGSEECVFYT 0.803501336800957 0.617945529805633 0.0396666666666667 0.049 1.8301577648152 2.84240678605719 0.0396666666666667 0.049 0.656121431149383 0.519707903443424 0.470851860872421 0.688123740994591 Q765P7 MTSS1L Q765P7.S612.p_MTSS1L Q765P7_S612s _1_1_612_612 Q765P7 Q765P7|A0A087WXN9 MTSS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27432.27432.3 21.58 21.58 7.044 5 1 1 0 1003.812 2929.4541 S612s TMT10 610 (R) AGsEECVFYTDETASPLAPDLAK (A) AGS(0.99)EECVFY(0.0)T(0.0)DET(0.0)AS(0.0)PLAPDLAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTSS1L 80498.5 6 8 425.1 319.48 HUMAN 1 1.8302 2.8424 MGQEFVESKEKLGTS-p Q9Y6W5;S215-p MGQEFVESKEKLGTS 0.0870441623178627 0.713481937196831 -0.344666666666667 0.047 22.59206677235 2.01837051241039 -0.344666666666667 0.047 0.00550545633834684 0.628294052648256 -4.45864907244221 0.512806748433814 Q9Y6W5 WASF2 Q9Y6W5.S215.p_WASF2 Q9Y6W5_S215s _1_1_215_215 Q9Y6W5 Q9Y6W5|Q9Y6W5-2 Wiskott-Aldrich syndrome protein family member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15881.15881.3 8.05 8.05 99 1 1 1 0 531.5998 1512.8132 S215s TMT10 208 (K) MGQEFVEsK (E) MGQEFVES(1.0)K K:TMT10,s:Phosphorylated S WASF2 54511.2 1 4 1819.1 112.9 HUMAN 1 -22.5921 2.0184 MGQIGVRTPLGPRVA-p Q13435;T217-p MGQIGVRTPLGPRVA 0.761367946892999 0.0141884945196519 0.0453333333333333 -0.492333333333333 2.2714475099412 25.6312177659526 0.0453333333333333 -0.492333333333333 0.592727734621385 0.00273450186181444 0.568110844208665 -5.19873865639766 Q13435 SF3B2 Q13435.T217.p_SF3B2 Q13435_T217t _1_1_217_217 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18496.18496.4 11.7 11.7 11.7 2 1 1 0 717.3748 2786.5119 T217t TMT10 199 (K) MGTPVPRPPQDMGQIGVRtPLGPR (V) MGT(0.0)PVPRPPQDMGQIGVRT(0.99)PLGPR t:Phosphorylated T SF3B2 100339.9 1 1 193.1 462.57 HUMAN 1 2.2714 -25.6312 MGRVRLRSDGAAIPR-p O43295;S858-p MGRVRLRSDGAAIPR 0.0285082967552234 0.00153897029596706 -1.35566666666667 -1.55566666666667 36.1692623333681 45.2886348436863 -1.35566666666667 -1.55566666666667 0.000241587114502092 2.95894243096584e-05 -8.55209812524192 -12.7865286955508 O43295 SRGAP3 O43295.S858.p_SRGAP3 O43295_S858s _1_1_858_858 O43295 O43295|O43295-2 SLIT-ROBO Rho GTPase-activating protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8685.8685.3 13.41 13.41 99 1 1 1 0 455.5797 1284.7586 S858s TMT10 856 (R) LRsDGAAIPR (R) LRS(1.0)DGAAIPR s:Phosphorylated S SRGAP3 125471.5 5 6 754.1 231.27 HUMAN 1 -36.1693 -45.2886 MGSSFSVSPKAESAV-p Q9NQC3;S307-p MGSSFSVSPKAESAV 0.486016018411509 0.0564099910357838 0.154333333333333 -0.434333333333333 5.7746558314562 16.6384872308197 0.154333333333333 -0.434333333333333 0.26456623491676 0.021684593083255 1.24431442618651 -3.18940102519131 Q9NQC3 RTN4 Q9NQC3.S307.p_RTN4 Q9NQC3_S307s_1_1_307_307 Q9NQC3 Q9NQC3|Q9NQC3-6 Reticulon-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.32489.32489.4 18.8 14.46 1.319 9 1 1 0 934.4583 3638.8552 M300m S307s TMT10 282 (K) TLLIDRDLTEFSELEYSEmGSSFSVsPK (A) T(0.0)LLIDRDLT(0.0)EFS(0.0)ELEY(0.0)S(0.0)EM(1.0)GS(0.0)S(0.0)FS(0.0)VS(0.99)PK K:TMT10,m:Oxidized methionine,s:Phosphorylated S RTN4 130328.4 1 5 819.1 219 HUMAN 1 5.7747 -16.6385 MGTNKGASQAGMLAP-p Q15417;S215-p MGTNKGASQAGMLAP 0.730375351303024 0.132939760585225 0.0966666666666667 -0.222333333333333 2.58850644951037 11.5508572154272 0.0966666666666667 -0.222333333333333 0.550997153239995 0.0699703874018575 0.635518127709156 -2.25183853061357 Q15417 CNN3 Q15417.S215.p_CNN3 Q15417_S215s _1_1_215_215 Q15417 Q15417|Q15417-2|Q15417-3 Calponin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8565.8565.3 10.93 6.8 10.929 2 1 1 0 561.2849 1601.8743 S215s TMT10 213 (K) GAsQAGMLAPGTRR (D) GAS(0.99)QAGMLAPGT(0.0)RR s:Phosphorylated S CNN3 36584.2 1 9 1713.1 119.85 HUMAN 1 2.5885 -11.5509 MGTNRGASQAGMTGY-p P37802;S185-p MGTNRGASQAGMTGY 0.59052057106021 0.555380414278918 0.101333333333333 -0.073 4.21653314516774 3.4411070131203 0.101333333333333 -0.073 0.378744805759909 0.452782151388905 0.958300361117517 -0.808543014148727 P37802 TAGLN2 P37802.S185.p_TAGLN2 P37802_S185s _1_1_185_185 P37802 P37802-2|Q9UI15|C9J5W6 Transgelin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13021.13021.2 16.47 16.47 4.298 3 1 1 0 846.8759 1612.7773 S185s TMT10 183 (R) GAsQAGMTGYGMPR (Q) GAS(0.99)QAGMT(0.0)GY(0.0)GMPR s:Phosphorylated S TAGLN2 22562.2 2 4 2811.1 69.69 HUMAN 1 4.2165 -3.4411 MGVSKHKSESPCESP-p Q8NI27;S1514-p MGVSKHKSESPCESP 0.234058938491699 0.0168058901594455 -0.190666666666667 0.380333333333333 12.090973678621 24.4915406697433 -0.190666666666667 0.380333333333333 0.0617877857759696 0.00355505179909533 -2.34848121793298 4.91017499015504 Q8NI27 THOC2 Q8NI27.S1514.p_THOC2 Q8NI27_S1514sS1516s_2_2_1514_1516 Q8NI27 Q8NI27|A0A0C4DG98|Q8NI27-2 THO complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8432.8432.3 8.26 8.26 1.164 4 2 2 0 879.4072 2476.2745 S1514s S1516s TMT10 1512 (K) HKsEsPCESPYPNEK (D) HKS(0.99)ES(0.99)PCES(0.0)PY(0.0)PNEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S THOC2 184654.1 2 20 512.1 287.1 HUMAN 1 -12.091 24.4915 MGVVQACSPEPCLQA-p Q96E14;S112-p MGVVQACSPEPCLQA 0.863531937888239 0.0778325933281396 0.0256666666666667 -0.235666666666667 1.24215853917284 14.7103378478702 0.0256666666666667 -0.235666666666667 0.751249413716657 0.0338038538371845 0.333564883836213 -2.82250094660024 Q96E14 RMI2 Q96E14.S112.p_RMI2 Q96E14_S112s _1_1_112_112 Q96E14 Q96E14|Q96E14-2 RecQ-mediated genome instability protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29838.29838.3 20.07 20.07 17.381 2 1 1 0 968.8081 2824.4634 S112s TMT10 101 (K) YVMVMGVVQACsPEPCLQAVK (M) Y(0.0)VMVMGVVQACS(0.99)PEPCLQAVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RMI2 16036.2 1 3 3626.1 46.66 HUMAN 1 1.2422 -14.7103 MHGQTWTSPAQGPGY-p Q14004-2;S1423-p MHGQTWTSPAQGPGY 0.96398050870183 0.00609801306239028 0.0103333333333333 0.541666666666667 0.307472408896187 31.9515977754191 0.0103333333333333 0.541666666666667 0.93164993737969 0.000638028711358863 0.0898348476339265 7.03647013368064 Q14004 CDK13 Q14004.2.S1423.p_CDK13 Q14004-2_S1423s _1_1_1423_1423 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17653.17653.4 24.39 18.85 1.126 10 1 1 0 1148.5184 4511.0519 S1423s TMT10 1397 (K) MHNYNYGGNLQENPSGPSLMHGQTWTsPAQGPGYSQGYR (G) MHNY(0.0)NY(0.0)GGNLQENPS(0.0)GPS(0.0)LMHGQT(0.0)WT(0.0)S(0.99)PAQGPGY(0.0)S(0.0)QGY(0.0)R s:Phosphorylated S CDK13 159173.6 1 17 145.1 520.12 HUMAN 1 0.3075 31.9516 MHLSLKGSPLTERKV-p Q4AC94;S1652-p MHLSLKGSPLTERKV 0.227820998051172 0.00686876794610447 -0.710666666666667 0.481 12.3523149770322 31.0326259112091 -0.710666666666667 0.481 0.0581793014315193 0.000788383286668447 -2.39498588585261 6.74138667454208 Q4AC94 C2CD3 Q4AC94.S1652.p_C2CD3 Q4AC94_S1652s _1_1_1652_1652 Q4AC94 Q4AC94|Q4AC94-3|Q4AC94-1|Q4AC94-4|Q4AC94-2 C2 domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6874.6874.3 7.23 7.23 7.234 2 1 1 0 475.934 1345.8204 S1652s TMT10 1651 (K) GsPLTERK (V) GS(0.99)PLT(0.0)ERK K:TMT10,s:Phosphorylated S C2CD3 262780.3 1 5 722.1 237.14 HUMAN 1 -12.3523 31.0326 MHQQQSRSVMTEEYK-p Q96AE4;S99-p MHQQQSRSVMTEEYK 0.957246455101486 0.00846332468784446 0.011 0.457 0.370801036011921 29.421138493645 0.011 0.457 0.918163229918978 0.00114257877095873 0.107635381152554 6.24826567363644 Q96AE4 FUBP1 Q96AE4.S99.p_FUBP1 Q96AE4_S99s _1_1_99_99 Q96AE4 E9PEB5|Q96AE4-2 Far upstream element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31910.31910.4 17.54 17.54 2.755 3 1 1 0 692.3557 2686.4349 S99s TMT10 99 (R) sVMTEEYKVPDGMVGFIIGR (G) S(0.99)VMT(0.0)EEY(0.0)KVPDGMVGFIIGR K:TMT10,s:Phosphorylated S FUBP1 67730.3 4 4 1157.1 171.64 HUMAN 1 0.3708 29.4211 MICSKRRSGASEANL-p P46013;S648-p MICSKRRSGASEANL 0.718243489759715 0.0158314452330284 -0.056 -0.449333333333333 2.71261131285196 24.8827158758652 -0.056 -0.449333333333333 0.535474592138988 0.00324884066449268 -0.661410490589161 -5.00792118567946 P46013 MKI67 P46013.S648.p_MKI67 P46013_S648s _1_1_648_648 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16067.16067.2 13.07 11.72 3.088 2 1 1 0 734.884 1388.7947 S648s Hydrogen 648 (R) sGASEANLIVAK (S) S(0.99)GAS(0.0)EANLIVAK K:TMT10-Lys-Only,s:Phosphorylated S MKI67 360912.4 2 15 5.1 1918.46 HUMAN 1 -2.7126 -24.8827 MIDNLPDSPDEVAKE-p Q9P0V3;S131-p MIDNLPDSPDEVAKE 0.0506176118125653 0.0865648874746129 -0.545666666666667 -0.191666666666667 28.5397179625887 14.0676503322666 -0.545666666666667 -0.191666666666667 0.00139967821684354 0.039195387894785 -5.9998431204964 -2.70371626601858 Q9P0V3 SH3BP4 Q9P0V3.S131.p_SH3BP4 Q9P0V3_S131s _1_1_131_131 Q9P0V3 Q9P0V3|Q9P0V3-2 SH3 domain-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23142.23142.3 22.31 22.31 12.383 5 1 1 0 948.4536 2763.3759 S131s TMT10 116 (R) NSTLSDSGMIDNLPDsPDEVAK (E) NS(0.0)T(0.0)LS(0.0)DS(0.0)GMIDNLPDS(0.99)PDEVAK K:TMT10,s:Phosphorylated S SH3BP4 108463.7 3 5 782.1 225.91 HUMAN 1 -28.5397 -14.0677 MIGEEVPSDQYYWAP-p O60716-3;S331-p MIGEEVPSDQYYWAP 0.564405993858839 0.920802265510344 0.077 0.01 4.57705870859173 0.50401873817851 0.077 0.01 0.348573308956928 0.890426601728532 1.02594831721004 0.144364986064822 O60716 CTNND1 O60716.3.S331.p_CTNND1 O60716-3_S331s _1_1_331_331 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-24 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26653.26653.4 21.29 21.29 1.636 5 1 1 0 831.3708 3242.4938 S331s TMT10 320 (R) SYEDMIGEEVPsDQYYWAPLAQHER (G) S(0.0)Y(0.0)EDMIGEEVPS(0.99)DQY(0.0)Y(0.0)WAPLAQHER s:Phosphorylated S CTNND1 105545.3 2 22 21.1 1014.17 HUMAN 1 4.5771 0.504 MIHFRSSSVKSLSQE-p A2A2Y4;S24-p MIHFRSSSVKSLSQE 0.458906777881966 0.0775875582668693 0.106 -0.271 6.24035646566061 14.7274259037843 0.106 -0.271 0.237664520535908 0.0336711081446133 1.32727030051064 -2.82568137050245 A2A2Y4 FRMD3 A2A2Y4.S24.p_FRMD3 A2A2Y4_S24s_1_1_24_24 A2A2Y4 A2A2Y4|A2A2Y4-2 FERM domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23661.23661.3 9.17 2.05 1.108 6 1 1 0 808.413 2327.2576 S24s M32m TMT10 22 (R) SSsVKSLSQEmRCTIR (L) S(0.0)S(0.0)S(0.99)VKS(0.0)LS(0.0)QEM(1.0)RCT(0.0)IR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine FRMD3 69683.6 1 1 3462.1 50.35 HUMAN 1 6.2404 -14.7274 MIIEDVLSPDTCVCR-p Q92917;S388-p MIIEDVLSPDTCVCR 0.373228695696441 0.112096732301404 0.149 -0.225333333333333 7.93389118797731 12.5435671111775 0.149 -0.225333333333333 0.16092031765852 0.0556728288020707 1.62369036135328 -2.4278596479952 Q92917 GPKOW Q92917.S388.p_GPKOW Q92917_S388s _1_1_388_388 Q92917 Q92917 G-patch domain and KOW motifs-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28077.28077.2 15.44 15.44 3.632 2 1 1 0 1058.9888 2037.0016 S388s TMT10 381 (K) MIIEDVLsPDTCVCR (T) MIIEDVLS(0.99)PDT(0.0)CVCR C:Carbamidomethylation,s:Phosphorylated S GPKOW 52456.1 2 7 1512.1 134.72 HUMAN 1 7.9339 -12.5436 MILIQDGSQNTNVDK-p A0A087WTP3;S274-p MILIQDGSQNTNVDK 0.103816750749035 0.0203026298888066 0.313333333333333 0.328666666666667 20.7774326438625 23.1746095488375 0.313333333333333 0.328666666666667 0.0083609713566815 0.00481436535463065 4.04781806045715 4.59063469778459 A0A087WTP3 NotFound A0A087WTP3.S274.p_NotFound A0A087WTP3_S274s _1_1_274_274 A0A087WTP3 Q92945|A0A087WTP3 Far upstream element-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21333.21333.4 16.23 12.01 2.519 2 1 1 0 645.8473 2500.3958 S274s TMT10 267 (K) MILIQDGsQNTNVDKPLR (I) MILIQDGS(0.99)QNT(0.0)NVDKPLR K:TMT10,s:Phosphorylated S KHSRP 73482.9 2 7 970.1 193.49 HUMAN 1 20.7774 23.1746 MILKKKRSIGASPNP-p A6NMQ1;S192-p MILKKKRSIGASPNP 0.815362833790705 0.0090396054976354 -0.0353333333333333 -0.427333333333333 1.70171472340663 28.9171794645294 -0.0353333333333333 -0.427333333333333 0.675816090474245 0.00128316366568773 -0.441682275849559 -6.10010695855792 A6NMQ1 POLA1 A6NMQ1.S192.p_POLA1 A6NMQ1_S192s _1_1_192_192 A6NMQ1 A6NMQ1|P09884|A0A087WU64 DNA polymerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17671.17671.3 19.71 17.64 3.01 6 1 1 0 778.7293 2254.2029 S192s Hydrogen 192 (R) sIGASPNPFSVHTATAVPSGK (I) S(0.99)IGAS(0.0)PNPFS(0.0)VHT(0.0)AT(0.0)AVPS(0.0)GK K:TMT10-Lys-Only,s:Phosphorylated S POLA1 168280.1 3 2 1873.1 109.8 HUMAN 1 -1.7017 -28.9172 MINTFVPSGKIMQVV-p Q13510-2;S106-p MINTFVPSGKIMQVV 0.23797684518109 0.181819993632206 -0.193 0.173666666666667 11.9324558419906 9.73850699653548 -0.193 0.173666666666667 0.0640847088844627 0.10620606061932 -2.32035985026472 1.93555410811499 Q13510 ASAH1 Q13510.2.S106.p_ASAH1 Q13510-2_S106s _1_1_106_106 Q13510-2 Q13510-2|A0A1B0GW48|A0A1B0GVA3 Isoform 2 of Acid ceramidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22480.22480.3 13.62 13.62 13.619 2 1 1 0 582.6425 1665.9398 S106s TMT10 98 (K) NMINTFVPsGK (I) NMINT(0.0)FVPS(0.99)GK K:TMT10,s:Phosphorylated S ASAH1 46959.2 1 1 6147.1 13.62 HUMAN 1 -11.9325 9.7385 MIPKVEWSAFLEAAD-p Q9UI30;S52-p MIPKVEWSAFLEAAD 0.766931048095333 0.479778426928323 -0.0516666666666667 0.0953333333333334 2.20699201988197 4.2558333598127 -0.0516666666666667 0.0953333333333334 0.601590262468589 0.375332925606501 -0.554169148053246 0.965555951657392 Q9UI30 TRMT112 Q9UI30.S52.p_TRMT112 Q9UI30_S52s _1_1_52_52 Q9UI30 Q9UI30|F5GX77|F5GYQ2 Multifunctional methyltransferase subunit TRM112-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36577.36577.3 15.26 15.26 99 1 1 1 0 643.9834 1849.9646 S52s TMT10 49 (K) VEWsAFLEAADNLR (L) VEWS(1.0)AFLEAADNLR s:Phosphorylated S TRMT112 14313.2 1 2 3693.1 45.14 HUMAN 1 -2.207 4.2558 MIQRVNGSLAVSRAL-p P35813-3;S263-p MIQRVNGSLAVSRAL 0.718648709176867 0.00369748508651921 0.0513333333333333 0.758666666666667 2.70771189933013 36.1004247851735 0.0513333333333333 0.758666666666667 0.536079018848629 0.000245446883136364 0.66039323752279 8.50827724336563 P35813 PPM1A P35813.3.S263.p_PPM1A P35813-3_S263s _1_1_263_263 P35813-3 O75688|P35813-3|O75688-2|O75688-4 Isoform 3 of Protein phosphatase 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9850.9850.2 9.27 9.27 3.621 2 1 1 0 606.3206 1131.6683 S263s TMT10 260 (R) VNGsLAVSR (A) VNGS(0.99)LAVS(0.0)R s:Phosphorylated S PPM1A 52164.1 1 4 4424.1 31.61 HUMAN 1 2.7077 36.1004 MISPRSPSPPLPTHI-p Q8IZ21;S344-p MISPRSPSPPLPTHI 0.659007682953711 0.29495226677677 0.0646666666666667 0.128 3.39749751302006 6.99979517340748 0.0646666666666667 0.128 0.457351648376217 0.199535641987597 0.800054179829455 1.46057384822346 Q8IZ21 PHACTR4 Q8IZ21.S344.p_PHACTR4 Q8IZ21_S344sT358t_2_2_344_358 Q8IZ21 Q8IZ21-2|Q8IZ21-3 Phosphatase and actin regulator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22878.23500.4 17.21 17.21 1.159 4 2 2 0 769.6524 2915.6548 S344s T358t TMT10 342 (R) SPsPPLPTHIPPEPPRtPPFPAK (T) S(0.0)PS(0.99)PPLPT(0.0)HIPPEPPRT(0.99)PPFPAK K:TMT10,s:Phosphorylated S,t:Phosphorylated T PHACTR4 78438 20 21 350.1 351.04 HUMAN 1 3.3975 6.9998 MITIHLPSPVTAQKY-p P13639;S360-p MITIHLPSPVTAQKY 0.298289139550046 0.758315518641896 -0.165666666666667 -0.0366666666666666 9.87850573367191 1.65909555010604 -0.165666666666667 -0.0366666666666666 0.102837006601891 0.682480810943013 -1.96061028172874 -0.431861872656419 P13639 EEF2 P13639.S360.p_EEF2 P13639_S360s _1_1_360_360 P13639 P13639 Elongation factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.37043.37043.4 24.7 24.7 1.829 3 1 1 0 785.4351 3058.7528 S360s TMT10 343 (R) WLPAGDALLQMITIHLPsPVTAQK (Y) WLPAGDALLQMIT(0.0)IHLPS(0.99)PVT(0.0)AQK K:TMT10,s:Phosphorylated S EEF2 96306.4 4 6 693.1 242.75 HUMAN 1 -9.8785 -1.6591 MKAALEDTLAETEAR-p P08727;T323-p MKAALEDTLAETEAR 0.955750339780897 0.0101040429128612 0.00899999999999999 0.461666666666667 0.385854617467043 28.0336891317276 0.00899999999999997 0.461666666666667 0.914986187888611 0.00157264640618008 0.111834251943794 5.84699445079688 P08727 KRT19 P08727.T323.p_KRT19 P08727_T323t _1_1_323_323 P08727 P08727 Keratin, type I cytoskeletal 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14429.14429.2 18.56 18.56 3.502 2 1 1 0 849.9108 1618.8485 T323t TMT10 318 (K) AALEDtLAETEAR (F) AALEDT(0.99)LAET(0.0)EAR t:Phosphorylated T KRT19 44105.2 2 20 383.1 334.07 HUMAN 1 0.3859 28.0337 MKAKRCATPVIIDEI-p Q9ULW0;T147-p MKAKRCATPVIIDEI 0.174176357894748 0.009872320291796 0.214666666666667 -0.482333333333333 15.1186120867859 28.2200555054073 0.214666666666667 -0.482333333333333 0.0307708002725328 0.00150658781097906 2.90072671501983 -5.89969871421605 Q9ULW0 TPX2 Q9ULW0.T147.p_TPX2 Q9ULW0_T147t _1_1_147_147 Q9ULW0 Q9ULW0-2 Targeting protein for Xklp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.32257.32257.3 16.75 16.75 16.752 2 1 1 0 698.7157 2014.1659 T147t TMT10 145 (R) CAtPVIIDEILPSK (K) CAT(0.99)PVIIDEILPS(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T TPX2 86279.1 8 3 599.1 263.33 HUMAN 1 15.1186 -28.2201 MKALSYASLDKEDLL-p Q6R327-3;S1412-p MKALSYASLDKEDLL 0.89274858203672 0.991648128821114 0.02 0.00133333333333335 0.964724245304202 0.0538095987433484 0.02 0.00133333333333335 0.800806473991577 0.987686323487274 0.265006317715817 0.0161579064162636 Q6R327 RICTOR Q6R327.3.S1412.p_RICTOR Q6R327-3_S1412s _1_1_1412_1412 Q6R327-3 Q6R327-3 Isoform 3 of Rapamycin-insensitive companion of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27328.27328.4 20.97 20.97 2.281 5 1 1 0 782.6676 3047.6777 S1412s TMT10 1407 (K) ALSYAsLDKEDLLSPINQNTLQR (S) ALS(0.0)Y(0.0)AS(0.99)LDKEDLLS(0.0)PINQNT(0.0)LQR K:TMT10,s:Phosphorylated S RICTOR 197118.3 5 20 452.1 308.36 HUMAN 1 0.9647 0.0538 MKAYYGRSVDFRDPF-p Q7Z6E9;S815-p MKAYYGRSVDFRDPF 0.204437813280498 0.137204160344472 -0.263 -0.278666666666667 13.3452217140306 11.366676846793 -0.263 -0.278666666666667 0.0462890031924397 0.0730015893297299 -2.57346411301107 -2.21943790577565 Q7Z6E9 RBBP6 Q7Z6E9.S815.p_RBBP6 Q7Z6E9_S815s _1_1_815_815 Q7Z6E9 Q7Z6E9|Q7Z6E9-2 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20056.20056.4 18.94 18.94 6.482 3 1 1 0 597.8009 2308.2126 S815s TMT10 810 (K) AYYGRsVDFRDPFEK (E) AY(0.0)Y(0.0)GRS(0.99)VDFRDPFEK K:TMT10,s:Phosphorylated S RBBP6 202473.6 5 8 27.1 935.6 HUMAN 1 -13.3452 -11.3667 MKDAFARSIEMMDIV-p Q14721;S457-p MKDAFARSIEMMDIV 0.440361201395823 0.0259059289164277 -0.205333333333333 0.358 6.56318789366799 21.577480761911 -0.205333333333333 0.358 0.22063845647178 0.00695427601476017 -1.38431335051747 4.22161883433639 Q14721 KCNB1 Q14721.S457.p_KCNB1 Q14721_S457s _1_1_457_457 Q14721 Q14721 Potassium voltage-gated channel subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29760.29760.3 14.92 10.88 99 1 1 1 0 611.3173 1751.9688 S457s TMT10 457 (R) sIEMMDIVVEK (N) S(1.0)IEMMDIVVEK K:TMT10,s:Phosphorylated S KCNB1 96731.7 1 2 2926.1 65.77 HUMAN 1 -6.5632 21.5775 MKDGLPRTPSRRSRS-p Q9UQ35;T1434-p MKDGLPRTPSRRSRS 0.508518592067906 0.191914586260089 -0.103666666666667 0.142666666666667 5.42029632066637 9.42540679444845 -0.103666666666667 0.142666666666667 0.287058471432884 0.114145638180815 -1.18055242883398 1.88132012241544 Q9UQ35 SRRM2 Q9UQ35.T1434.p_SRRM2 Q9UQ35_T1434t _1_1_1434_1434 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5525.5525.3 9.16 4.17 1.358 2 1 1 0 436.5607 1227.7007 T1434t TMT10 1429 (K) DGLPRtPSR (R) DGLPRT(0.99)PS(0.0)R t:Phosphorylated T SRRM2 300351.7 15 86 2.1 3310.34 HUMAN 1 -5.4203 9.4254 MKDLEDES_______-p A0A0B4J220;S123-p MKDLEDES_______ 0.121789817308752 0.0375426056446231 0.379666666666667 -0.34 19.0195481995562 19.1506425542611 0.379666666666667 -0.34 0.0125327154712277 0.0121600607487661 3.67162249888188 -3.69572115975963 A0A0B4J220 C11orf98 A0A0B4J220.S123.p_C11orf98 A0A0B4J220_S123s _1_1_123_123 A0A0B4J220 A0A0B4J220 Chromosome 11 open reading frame 48, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14000.14000.4 21.39 21.39 21.386 2 1 1 0 740.6453 2879.5842 S123s TMT10 107 (K) KTKAPQDVEMKDLEDEs (-) KT(0.0)KAPQDVEMKDLEDES(0.99) K:TMT10,s:Phosphorylated S C11orf98 14233.5 6 2 2721.1 72.91 HUMAN 1 19.0195 -19.1506 MKEDGCNSSDKRLKR-p P46100;S1124-p MKEDGCNSSDKRLKR 0.15127853533293 0.312988308835143 -0.887666666666667 -0.134333333333333 16.5204685363626 6.66829648632482 -0.887666666666667 -0.134333333333333 0.0222819474866118 0.215362632580642 -3.16877460359679 -1.40244674093904 P46100 ATRX P46100.S1124.p_ATRX P46100_S1124s _1_1_1124_1124 P46100 P46100|P46100-4|P46100-3|P46100-5 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9402.9402.3 11.92 7.36 1.105 4 1 1 0 763.355 2208.088 S1124s TMT10 1115 (K) YSMKEDGCNsSDK (R) Y(0.0)S(0.0)MKEDGCNS(0.99)S(0.0)DK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ATRX 285034.2 1 34 18.1 1035.36 HUMAN 1 -16.5205 -6.6683 MKESAFQSEPRISES-p Q5T4S7-2;S1747-p MKESAFQSEPRISES 0.977983146562954 0.090209295771571 0.00466666666666666 -0.215666666666667 0.191135615216308 13.8247599506823 0.00466666666666667 -0.215666666666667 0.956943812060081 0.0414499494200306 0.0565358777477361 -2.659229098403 Q5T4S7 UBR4 Q5T4S7.2.S1747.p_UBR4 Q5T4S7-2_S1747s _1_1_1747_1747 Q5T4S7-2 Q5T4S7-2|Q5T4S7-4|Q5T4S7-3|Q5T4S7-5 Isoform 2 of E3 ubiquitin-protein ligase UBR4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17194.17194.3 9.65 9.65 3.975 4 1 1 0 715.3575 2064.0923 S1747s TMT10 1742 (K) ESAFQsEPRISESLVR (H) ES(0.0)AFQS(0.99)EPRIS(0.0)ES(0.0)LVR s:Phosphorylated S UBR4 583136.9 1 9 528.1 281.83 HUMAN 1 0.1911 -13.8248 MKEVVYWSPKKVADW-p Q86VZ5;S14-p MKEVVYWSPKKVADW 0.119364108783641 0.74302419467985 -0.787333333333333 -0.059 19.206395051284 1.77900697301139 -0.787333333333334 -0.059 0.0120049538502854 0.663894854541445 -3.71066612249716 -0.459234411981352 Q86VZ5 SGMS1 Q86VZ5.S14.p_SGMS1 Q86VZ5_S14s _1_1_14_14 Q86VZ5 Q86VZ5 Phosphatidylcholine:ceramide cholinephosphotransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20581.20581.2 11.7 4.1 4.595 2 1 1 0 773.4084 1465.8455 S14s TMT10 9 (K) EVVYWsPK (K) EVVY(0.0)WS(0.99)PK K:TMT10,s:Phosphorylated S SGMS1 49777.3 3 1 5120.1 22.71 HUMAN 1 -19.2064 -1.779 MKFVDSKSG______-p O75390;S465-p MKFVDSKSG______ 0.143638422086766 0.328751203387295 0.271 0.0996666666666667 17.2129415900008 6.39723683558173 0.271 0.0996666666666667 0.0189979106591294 0.229232566303417 3.30469384251276 1.35469028648554 O75390 CS O75390.S465.p_CS O75390_S465s _1_1_465_465 O75390 O75390|B4DJV2|A0A0C4DGI3 Citrate synthase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12839.12839.2 7.58 7.58 2.146 2 1 1 0 639.3303 1197.688 S465s TMT10 460 (K) FVDSKsG (-) FVDS(0.0)KS(0.99)G K:TMT10,s:Phosphorylated S CS 51939.7 1 2 5400.1 19.69 HUMAN 1 17.2129 6.3972 MKGDYFRYLSEVASG-p P31946;Y130-p MKGDYFRYLSEVASG 0.64244975465608 0.0329196901090389 0.0816666666666667 0.429666666666667 3.59259754474567 19.9960029123066 0.0816666666666667 0.429666666666667 0.437260498462497 0.0100092078711822 0.838406538088467 3.87446802872904 P31946 YWHAB P31946.Y130.p_YWHAB P31946_Y130y _1_1_130_130 P31946 P31946|P31946-2 14-3-3 protein beta/alpha GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16150.16150.3 9.8 9.8 9.797 3 1 1 0 574.2938 1640.8896 Y130y TMT10 130 (R) yLSEVASGDNK (Q) Y(0.99)LS(0.0)EVAS(0.0)GDNK K:TMT10,y:Phosphorylated Y YWHAB 28196 1 1 347.1 9.8 HUMAN 1 3.5926 19.996 MKGDYHRYLAEFATG-p P62258;Y131-p MKGDYHRYLAEFATG 0.383617908533383 0.0194825737237038 -0.149666666666667 0.351666666666667 7.70200661467006 23.4836423778968 -0.149666666666667 0.351666666666667 0.169745917703372 0.0044836919011229 -1.58342007209286 4.66433315439989 P62258 YWHAE P62258.Y131.p_YWHAE P62258_Y131y _1_1_131_131 P62258 P62258|P62258-2 14-3-3 protein epsilon GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12448.12448.3 11.71 6.99 11.713 2 1 1 0 565.2714 1613.8485 Y131y Hydrogen 131 (R) yLAEFATGNDRK (E) Y(0.99)LAEFAT(0.0)GNDRK K:TMT10-Lys-Only,y:Phosphorylated Y YWHAE 29344.6 3 1 303.1 11.71 HUMAN 1 -7.702 23.4836 MKGDYYRYLAEVAAG-p P63104;Y128-p MKGDYYRYLAEVAAG 0.798363861160931 0.00259686134026793 0.0613333333333333 0.698333333333333 1.88428597977071 39.4634025469599 0.0613333333333333 0.698333333333333 0.647994622810801 0.000113151351419556 0.483021066456083 9.89260449021573 P63104 YWHAZ P63104.Y128.p_YWHAZ P63104_Y128y _1_1_128_128 P63104 P63104|P63104-2|B0AZS6 14-3-3 protein zeta/delta GG20160819_MSz_CCLE_T4D7_pY_Injection_01.17917.17917.3 18.72 14.9 99 1 1 1 0 683.0411 1967.1417 Y128y TMT10 128 (R) yLAEVAAGDDKK (G) Y(1.0)LAEVAAGDDKK K:TMT10,y:Phosphorylated Y YWHAZ 27915.8 2 1 187.1 18.72 HUMAN 1 1.8843 39.4634 MKGSSSASIVKGQHE-p Q14126;S703-p MKGSSSASIVKGQHE 0.842098881009258 0.00557213836985422 -0.073 0.514 1.44393855274084 32.6646649882685 -0.0730000000000001 0.514 0.717143629274945 0.000541419010956411 -0.381805674075775 7.27274986850847 Q14126 DSG2 Q14126.S703.p_DSG2 Q14126_S703s _1_1_703_703 Q14126 Q14126 Desmoglein-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9552.9552.2 13.11 6.54 2.366 4 1 1 0 687.3766 1293.7778 S703s TMT10 698 (K) GSSSAsIVK (G) GS(0.0)S(0.0)S(0.0)AS(0.99)IVK K:TMT10,s:Phosphorylated S DSG2 123090.5 3 3 494.1 293.66 HUMAN 1 -1.4439 32.6647 MKGTKVKTPEMIIQK-p Q09666;T490-p MKGTKVKTPEMIIQK 0.113473614863545 0.0637824056892968 -0.321666666666667 -0.226333333333333 19.7159446282658 15.9141748862159 -0.321666666666667 -0.226333333333333 0.0106759255661815 0.025620199746685 -3.81825248522593 -3.04958773552565 Q09666 AHNAK Q09666.T490.p_AHNAK Q09666_T490t _1_1_490_490 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17958.18167.3 14.98 14.98 99 1 1 1 0 803.4881 2328.4859 T490t TMT10 488 (K) VKtPEMIIQKPK (I) VKT(1.0)PEMIIQKPK K:TMT10,t:Phosphorylated T AHNAK 629603.7 19 23 1.1 4313.36 HUMAN 1 -19.7159 -15.9142 MKIEHYFSPVSKEQQ-p Q96PZ2;S26-p MKIEHYFSPVSKEQQ 0.151198103969209 0.00718835900144098 -0.460333333333333 -0.817 16.5308619379466 30.6743630945324 -0.460333333333333 -0.817 0.0222286867735347 0.000856177263395234 -3.17079665751306 -6.6291331768394 Q96PZ2 FAM111A Q96PZ2.S26.p_FAM111A Q96PZ2_S26s _1_1_26_26 Q96PZ2 Q96PZ2 Protein FAM111A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19229.19229.3 16.8 16.8 6.014 3 1 1 0 582.3082 1664.9412 S26s TMT10 21 (K) IEHYFsPVSK (E) IEHY(0.0)FS(0.99)PVS(0.0)K K:TMT10,s:Phosphorylated S FAM111A 71050.8 1 1 2239.1 92.18 HUMAN 1 -16.5309 -30.6744 MKILSEVTPDQSKPE-p O43482;T221-p MKILSEVTPDQSKPE 0.536318608089857 0.143247604902918 0.119666666666667 0.161333333333333 5.00730590339549 11.1175661822258 0.119666666666667 0.161333333333333 0.315696240192051 0.077311372225479 1.10539678647015 2.17572581714566 O43482 OIP5 O43482.T221.p_OIP5 O43482_T221t _1_1_221_221 O43482 O43482 Protein Mis18-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17791.17791.2 11.27 11.27 1.844 3 1 1 0 1048.0339 2015.1061 T221t TMT10 216 (K) ILSEVtPDQSKPEN (-) ILS(0.0)EVT(0.99)PDQS(0.0)KPEN K:TMT10,t:Phosphorylated T OIP5 25204.5 1 4 2455.1 82.73 HUMAN 1 5.0073 11.1176 MKKKDEGSYSLEEPK-p P18827;S285-p MKKKDEGSYSLEEPK 0.677586717703107 0.0607832038989484 -0.0653333333333333 -0.29 3.16417959664285 16.2028122866522 -0.0653333333333334 -0.29 0.482594135824344 0.0239728005056529 -0.753566236916258 -3.10500130445902 P18827 SDC1 P18827.S285.p_SDC1 P18827_S285s _1_1_285_285 P18827 P18827 Syndecan-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10821.10821.3 14.45 14.45 2.154 3 1 1 0 836.1249 2426.3949 S285s TMT10 280 (K) KKDEGsYSLEEPK (Q) KKDEGS(0.99)Y(0.0)S(0.0)LEEPK K:TMT10,s:Phosphorylated S SDC1 32575.1 6 1 3921.1 40.65 HUMAN 1 -3.1642 -16.2028 MKKKKLPSDSGDLEA-p O60524;S831-p MKKKKLPSDSGDLEA 0.0563250744320524 0.0331452856684901 -0.720333333333333 0.277666666666667 27.2429226065162 19.9497302537784 -0.720333333333333 0.277666666666667 0.00188672124325076 0.0101164228678974 -5.63520330459334 3.86456560144894 O60524 NEMF O60524.S831.p_NEMF O60524_S831s _1_1_831_831 O60524 O60524|O60524-3|O60524-5 Nuclear export mediator factor NEMF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18015.18015.5 14.41 14.41 1.241 2 1 1 0 657.773 3204.87 S831s TMT10 828 (K) KLPsDSGDLEALEGKDKEK (E) KLPS(0.99)DS(0.0)GDLEALEGKDKEK K:TMT10,s:Phosphorylated S NEMF 123408.6 4 3 1429.1 143.12 HUMAN 1 -27.2429 19.9497 MKKLHVSTINLQKAW-p P42345;T1262-p MKKLHVSTINLQKAW 0.673294091647579 0.336160864847833 0.117333333333333 0.111666666666667 3.21880798287837 6.27253705021609 0.117333333333333 0.111666666666667 0.476561771759542 0.235909969783553 0.764514828389714 1.33264141274325 P42345 MTOR P42345.T1262.p_MTOR P42345_T1262t _1_1_1262_1262 P42345 P42345 Serine/threonine-protein kinase mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17396.17396.3 11.52 11.52 1.122 2 1 1 0 683.413 1968.2573 T1262t TMT10 1257 (K) KLHVStINLQK (A) KLHVS(0.0)T(0.99)INLQK K:TMT10,t:Phosphorylated T MTOR 290940.5 6 1 571.1 269.24 HUMAN 1 3.2188 6.2725 MKLWEAESKLSFATC-p Q9NYP9;S224-p MKLWEAESKLSFATC 0.864479811481231 0.0219808382522686 -0.031 0.317 1.23153106748257 22.6570999659049 -0.031 0.317 0.753090021581772 0.00542362936442219 -0.33098799707764 4.46892195684046 Q9NYP9 MIS18A Q9NYP9.S224.p_MIS18A Q9NYP9_S224s _1_1_224_224 Q9NYP9 Q9NYP9 Protein Mis18-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19005.19005.2 8.43 4.21 99 1 1 1 0 700.8673 1320.7564 S224s TMT10 219 (K) LWEAEsK (L) LWEAES(1.0)K K:TMT10,s:Phosphorylated S MIS18A 26833 1 4 1982.1 104.28 HUMAN 1 -1.2315 22.6571 MKLYKTLSEVKLEVE-p P46939;S1486-p MKLYKTLSEVKLEVE 0.43251883858067 0.555711967263436 0.104666666666667 0.065 6.70443944826477 3.43762844280209 0.104666666666667 0.065 0.21357777369494 0.453144961777842 1.40917110826208 0.807857086455054 P46939 UTRN P46939.S1486.p_UTRN P46939_S1486s _1_1_1486_1486 P46939 P46939-2 Utrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.35712.35712.3 20.86 20.86 2.171 3 1 1 0 785.7966 2275.4092 S1486s TMT10 1484 (K) TLsEVKLEVETVIK (T) T(0.0)LS(0.99)EVKLEVET(0.0)VIK K:TMT10,s:Phosphorylated S UTRN 396684.3 1 6 527.1 282.18 HUMAN 1 6.7044 3.4376 MKNKQLPSAGPDKNL-p Q5T5H1;S100-p MKNKQLPSAGPDKNL 0.886027178849554 0.269482311808605 -0.023 0.133333333333333 1.02944852678754 7.49957019520522 -0.023 0.133333333333333 0.78896029454072 0.177845540832363 -0.281249054995812 1.54774893616787 Q5T5H1 NotFound Q5T5H1.S100.p_NotFound Q5T5H1_S100s _1_1_100_100 Q5T5H1 Q5T5H1|O43768-4|A6NMQ3|O43768-3|O43768-7|O43768-9|A0A1W2PRU0|O43768-2|O43768-5|O43768-6 Alpha-endosulfine HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11727.11727.2 9.48 2.73 99 1 1 1 0 725.8904 1370.8044 S100s TMT10 97 (K) QLPsAGPDK (N) QLPS(1.0)AGPDK K:TMT10,s:Phosphorylated S ENSA 21164.7 1 9 1520.1 134.39 HUMAN 1 -1.0294 7.4996 MKPAPRLTPVRPAAA-p Q9Y2K7;T550-p MKPAPRLTPVRPAAA 0.96030951217984 0.100028043418156 0.012 -0.378 0.339845381788594 13.2152530481961 0.012 -0.378 0.924731095775558 0.0476952022984335 0.0989621079912483 -2.54850165184387 Q9Y2K7 KDM2A Q9Y2K7.T550.p_KDM2A Q9Y2K7_T550t _1_1_550_550 Q9Y2K7 Q9Y2K7|I3VM54|Q9Y2K7-2|Q9Y2K7-3|Q9Y2K7-5|Q9Y2K7-4 Lysine-specific demethylase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16551.16551.3 16 9.4 4.747 3 1 1 0 658.0378 1892.1279 T550t TMT10 549 (R) LtPVRPAAASPIVSGAR (R) LT(0.99)PVRPAAAS(0.0)PIVS(0.0)GAR t:Phosphorylated T KDM2A 135243.8 4 5 409.1 323.7 HUMAN 1 0.3398 -13.2153 MKPNTQATPP_____-p P05362;T530-p MKPNTQATPP_____ 0.393895312924686 0.814951859880465 0.159666666666667 0.0236666666666667 7.46544007141565 1.2434766940305 0.159666666666667 0.0236666666666667 0.17924869101269 0.751021431819594 1.54226487763881 0.333850182412729 P05362 ICAM1 P05362.T530.p_ICAM1 P05362_T530t _1_1_530_530 P05362 P05362|E7ESS4 Intercellular adhesion molecule 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11716.11716.3 10.14 10.14 5.67 3 1 1 0 626.6594 1797.9933 T530t TMT10 520 (K) GTPMKPNTQAtPP (-) GT(0.0)PMKPNT(0.0)QAT(0.99)PP K:TMT10,t:Phosphorylated T ICAM1 58622.9 2 1 6686.1 10.14 HUMAN 1 7.4654 1.2435 MKPPSYDSDEGNETE-p O43815;S137-p MKPPSYDSDEGNETE 0.186904399781084 0.319364182184638 -0.256 0.108 14.321150134059 6.55557241314916 -0.256 0.108 0.0369730251833762 0.221025691861106 -2.75207522142365 1.38261353732209 O43815 STRN O43815.S137.p_STRN O43815_S137s_1_1_137_137 O43815 O43815|O43815-2 Striatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21466.21466.5 26.81 26.81 3.359 7 1 1 0 1080.3291 5301.649 M130m S137s TMT10 119 (K) LKYGTELNQGDmKPPSYDsDEGNETEVQPQQNSQLMWK (Q) LKY(0.0)GT(0.0)ELNQGDM(0.99)KPPS(0.0)Y(0.0)DS(0.99)DEGNET(0.0)EVQPQQNS(0.0)QLM(0.0)WK K:TMT10,m:Oxidized methionine,s:Phosphorylated S STRN 86587 35 1 1137.2 173.35 HUMAN 1 -14.3212 6.5556 MKQGDEESENSVKRH-p O60503;S354-p MKQGDEESENSVKRH 0.111580519427745 0.0773808127257072 0.555666666666667 -0.315666666666667 19.9077885570249 14.7456825120226 0.555666666666667 -0.315666666666667 0.0102145948211152 0.0335298606725233 3.85918868927518 -2.82908058928739 O60503 ADCY9 O60503.S354.p_ADCY9 O60503_S354s _1_1_354_354 O60503 O60503 Adenylate cyclase type 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18697.18697.4 13.39 13.39 2.564 2 1 1 0 761.8956 2964.5915 S354s TMT10 341 (R) IIADDLMKQGDEEsENSVKR (H) IIADDLMKQGDEES(0.99)ENS(0.0)VKR K:TMT10,s:Phosphorylated S ADCY9 152923.1 2 2 658.1 252.1 HUMAN 1 19.9078 -14.7457 MKQKSLMSLGNEAEE-p O43149;S1395-p MKQKSLMSLGNEAEE 0.0168231449294041 0.251309449844667 -1.08166666666667 0.782666666666667 41.4628255722428 7.89831085498783 -1.08166666666667 0.782666666666667 7.14031617343215e-05 0.162244100688348 -10.8355450518554 1.61700950201512 O43149 ZZEF1 O43149.S1395.p_ZZEF1 O43149_S1392sS1395s_2_2_1392_1395 O43149 O43149 Zinc finger ZZ-type and EF-hand domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6872.6872.4 8.15 2.76 99 2 2 2 0 550.5116 2022.0942 S1392s M1394m S1395s N1398n Hydrogen 1390 (K) QKsLmsLGnEAEEK (H) QKS(1.0)LM(1.0)S(1.0)LGN(1.0)EAEEK K:TMT10-Lys-Only,s:Phosphorylated S,m:Oxidized methionine,n:Deamidated ZZEF1 335976 1 10 1481.1 138.54 HUMAN 1 -41.4628 7.8983 MKQLGAGTPK_____-p O76054;T401-p MKQLGAGTPK_____ 0.274136646553826 0.514165156540718 0.163 0.064 10.6447499237619 3.87645743076822 0.163 0.064 0.0862035215145125 0.409594632589888 2.09398274993334 0.893291553044328 O76054 SEC14L2 O76054.T401.p_SEC14L2 O76054_T401t _1_1_401_401 O76054 O76054|B3KRD8|O76054-5 SEC14-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8894.8894.2 10.75 5.61 99 1 1 1 0 655.3673 1229.7618 T401t TMT10 396 (K) QLGAGtPK (-) QLGAGT(1.0)PK K:TMT10,t:Phosphorylated T SEC14L2 46657.9 3 3 4546.1 30.04 HUMAN 1 10.6447 3.8765 MKQPPATTPPFKTHC-p A0A0A0MTC1;T352-p MKQPPATTPPFKTHC 0.468720713206654 0.0176032432582518 -0.105666666666667 -0.375 6.07555785850893 24.1716529032983 -0.105666666666667 -0.375 0.246856299350418 0.00382679069837754 -1.2980124240762 -4.83122391995132 A0A0A0MTC1 RNF213 A0A0A0MTC1.T352.p_RNF213 A0A0A0MTC1_T352t _1_1_352_352 A0A0A0MTC1 Q63HN8-4|A0A0A0MTC1|A0A0A0MTR7|Q63HN8-5 E3 ubiquitin-protein ligase RNF213 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15945.16156.3 13.7 13.7 1.145 2 1 1 0 704.0644 2030.2076 T352t TMT10 345 (R) MKQPPATtPPFK (T) MKQPPAT(0.0)T(0.99)PPFK K:TMT10,t:Phosphorylated T RNF213 604064.3 7 1 2477.1 81.83 HUMAN 1 -6.0756 -24.1717 MKQPPMFSPLISARF-p Q9NZM3;S110-p MKQPPMFSPLISARF 0.623709142250311 0.0138170402589298 -0.0783333333333334 0.369 3.80955568464075 25.8212754881026 -0.0783333333333334 0.369 0.415953163400705 0.00261741418174801 -0.880546369191854 5.24800095617557 Q9NZM3 ITSN2 Q9NZM3.S110.p_ITSN2 Q9NZM3_S110s _1_1_110_110 Q9NZM3 Q9NZM3|A0A087WVF7|Q9NZM3-2|Q9NZM3-3 Intersectin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25148.25148.2 12.91 5.78 3.675 2 1 1 0 826.9256 1572.877 S110s TMT10 105 (K) QPPMFsPLISAR (F) QPPMFS(0.99)PLIS(0.0)AR s:Phosphorylated S ITSN2 194542 4 1 1476.1 139.1 HUMAN 1 -3.8096 25.8213 MKQVEELYHSLLELG-p A0A0D9SGF6;Y1073-p MKQVEELYHSLLELG 0.995213264133306 0.36708239185726 -0.001 0.0873333333333334 0.0407706199516233 5.77125146914613 -0.001 0.0873333333333333 0.990656145485226 0.264773705299703 -0.01226178031606 1.24341936598719 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.Y1073.p_SPTAN1 A0A0D9SGF6_Y1073y _1_1_1073_1073 A0A0D9SGF6 A0A0D9SGF6|Q13813-2 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.28172.28172.3 22.45 22.45 5.839 2 1 1 0 775.7436 2245.248 Y1073y TMT10 1068 (K) QVEELyHSLLELGEK (R) QVEELY(0.99)HS(0.0)LLELGEK K:TMT10,y:Phosphorylated Y SPTAN1 288398.5 1 5 263.1 396.39 HUMAN 1 -0.0408 5.7713 MKRERSRSHDSASSS-p Q4ZG55;S1124-p MKRERSRSHDSASSS 0.576391554372716 0.00843795504929371 0.0916666666666667 0.591 4.40233378649911 29.4484350260922 0.0916666666666667 0.591 0.362882998404593 0.00113541988888436 0.993296315000114 6.25637079630993 Q4ZG55 GREB1 Q4ZG55.S1124.p_GREB1 Q4ZG55_S1124s _1_1_1124_1124 Q4ZG55 Q4ZG55|Q4ZG55-4 Protein GREB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4700.4700.2 11.87 11.87 2.945 7 1 1 0 751.3405 1421.707 S1124s Hydrogen 1124 (R) sHDSASSSLSSK (A) S(0.99)HDS(0.0)AS(0.0)S(0.0)S(0.0)LS(0.0)S(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S GREB1 219316 4 6 1072.1 180.69 HUMAN 1 4.4023 29.4484 MKRPRLLSTKGDTLD-p Q5VWG9;S199-p MKRPRLLSTKGDTLD 0.00930600980988524 0.00117915701678604 -1.33833333333333 -1.40266666666667 48.805474922749 48.5208801280084 -1.33833333333333 -1.40266666666667 1.31659592849575e-05 1.40576260767967e-05 -14.9456788772111 -14.7180891199171 Q5VWG9 TAF3 Q5VWG9.S199.p_TAF3 Q5VWG9_S199s _1_1_199_199 Q5VWG9 Q5VWG9 Transcription initiation factor TFIID subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31943.31943.3 13.49 13.49 1.154 3 1 1 0 794.4531 2301.3794 S199s TMT10 197 (R) LLsTKGDTLDVVLLEAR (E) LLS(0.99)T(0.0)KGDT(0.0)LDVVLLEAR K:TMT10,s:Phosphorylated S TAF3 104321.6 3 2 699.1 240.69 HUMAN 1 -48.8055 -48.5209 MKRVGFQYEGTYKWV-p P11413-3;Y533-p MKRVGFQYEGTYKWV 0.183791550733726 0.536004936029666 -0.215 0.103333333333333 14.4686859217929 3.6441486719336 -0.215 0.103333333333333 0.0357380957298061 0.432100862117885 -2.77938396693694 0.84833173180254 P11413 G6PD P11413.3.Y533.p_G6PD P11413-3_Y533y _1_1_533_533 P11413-3 P11413-2|P11413-3 Isoform 3 of Glucose-6-phosphate 1-dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12727.12727.3 9 9 2.611 3 1 1 0 629.3257 1805.995 Y533y TMT10 528 (K) RVGFQyEGTYK (W) RVGFQY(0.99)EGT(0.0)Y(0.0)K K:TMT10,y:Phosphorylated Y G6PD 62980.7 1 3 4695.1 27.84 HUMAN 1 -14.4687 3.6441 MKSICANSPIKAQQD-p A8K979;S302-p MKSICANSPIKAQQD 0.652695631517557 0.00157953236888053 -0.081 -1.322 3.47438687931222 45.0187165380291 -0.081 -1.322 0.449325754320342 3.1486786994622e-05 -0.815223146181551 -12.6366074880608 A8K979 ERI2 A8K979.S302.p_ERI2 A8K979_S302s _1_1_302_302 A8K979 A8K979|A8K979-2 ERI1 exoribonuclease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12530.12530.2 12.69 8.48 6.829 2 1 1 0 764.4042 1447.8343 S302s TMT10 297 (K) SICANsPIK (A) S(0.0)ICANS(0.99)PIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ERI2 78597.4 4 1 5287.1 20.96 HUMAN 1 -3.4744 -45.0187 MKSLEVRSPEYTEVE-p Q5T481;S1120-p MKSLEVRSPEYTEVE 0.423595531353903 0.00604775327324358 -0.144 0.496 6.87512620015206 32.0406608267811 -0.144 0.496 0.205346535464088 0.000625077573117058 -1.43913652111624 7.06562696925722 Q5T481 RBM20 Q5T481.S1120.p_RBM20 Q5T481_S1120s _1_1_1120_1120 Q5T481 Q5T481 RNA-binding protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18997.18997.2 8.96 8.96 2.215 4 1 1 0 1159.1062 2237.2429 S1120s TMT10 1115 (K) SLEVRsPEYTEVELK (Q) S(0.0)LEVRS(0.99)PEY(0.0)T(0.0)EVELK K:TMT10,s:Phosphorylated S RBM20 135496 1 13 522.1 283.33 HUMAN 1 -6.8751 32.0407 MKSLQDDSKNENLLD-p Q14667;S1846-p MKSLQDDSKNENLLD 0.572245413514359 0.00576997804828134 -0.0926666666666667 -0.546333333333333 4.46624414021764 32.3754449394305 -0.0926666666666667 -0.546333333333333 0.357581948017025 0.000578702696589871 -1.0052676528549 -7.17612802151501 Q14667 KIAA0100 Q14667.S1846.p_KIAA0100 Q14667_S1846s _1_1_1846_1846 Q14667 Q14667|Q14667-2|Q08E86|K7EQ86 Protein KIAA0100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20143.20143.4 15.47 15.47 3.701 2 1 1 0 686.1135 2661.4662 S1846s TMT10 1841 (K) SLQDDsKNENLLDLNQK (L) S(0.0)LQDDS(0.99)KNENLLDLNQK K:TMT10,s:Phosphorylated S KIAA0100 256263 1 3 3058.1 61.86 HUMAN 1 -4.4662 -32.3754 MKTGLSRSLQTLPTD-p B0QY95;S94-p MKTGLSRSLQTLPTD 0.887353114485877 0.984661667148945 -0.0263333333333333 -0.00233333333333332 1.01245478862193 0.0992386556541423 -0.0263333333333334 -0.00233333333333331 0.792053506798166 0.977408551535088 -0.276999668765112 -0.029647931094705 B0QY95 MIEF1 B0QY95.S94.p_MIEF1 B0QY95_S94s _1_1_94_94 B0QY95 B0QY95|Q9NQG6 Mitochondrial dynamics protein MID51 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20720.20720.4 20.94 20.94 1.204 8 1 1 0 893.9539 3492.8197 S94s TMT10 94 (R) sLQTLPTDSSTFDTDTFCPPRPKPVAR (K) S(0.99)LQT(0.0)LPT(0.0)DS(0.0)S(0.0)T(0.0)FDT(0.0)DT(0.0)FCPPRPKPVAR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MIEF1 53787.3 6 3 2809.1 69.8 HUMAN 1 -1.0125 -0.0992 MKVCRKDSLAIKLSN-p Q9C0D0;S423-p MKVCRKDSLAIKLSN 0.542566220771654 0.247399375588441 -0.188666666666667 0.472 4.90090973077881 7.99252724522593 -0.188666666666667 0.472 0.323525879812658 0.158762261083431 -1.0858676206181 1.63334705714041 Q9C0D0 PHACTR1 Q9C0D0.S423.p_PHACTR1 Q9C0D0_S423s _1_1_423_423 Q9C0D0 Q9C0D0|Q9C0D0-2 Phosphatase and actin regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10199.10199.2 8.72 1.36 99 1 1 1 0 656.8859 1232.7978 S423s Hydrogen 421 (R) KDsLAIK (L) KDS(1.0)LAIK K:TMT10-Lys-Only,s:Phosphorylated S PHACTR1 66763.3 5 10 638.1 255.38 HUMAN 1 -4.9009 7.9925 MKVRKSSTPEEVKKR-p P23528;T25-p MKVRKSSTPEEVKKR 0.0941179808048868 0.939459850151683 1.311 -0.0393333333333333 21.8258425141229 0.386416156862672 1.311 -0.0393333333333332 0.00656773692617324 0.914867888532581 4.28221715530047 -0.111980295114387 P23528 CFL1 P23528.T25.p_CFL1 P23528_T25t _1_1_25_25 P23528 E9PK25|P23528|G3V1A4 Cofilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7587.7587.2 11.68 7.7 1.382 3 1 1 0 707.8646 1334.7568 T25t TMT10 23 (K) SStPEEVK (K) S(0.0)S(0.0)T(0.99)PEEVK K:TMT10,t:Phosphorylated T CFL1 18730.4 4 4 681.1 245.42 HUMAN 1 21.8258 -0.3864 MKYIQHTYRKGVKID-p J3QQX2;Y133-p MKYIQHTYRKGVKID 0.101218422745456 0.00897688600590423 -0.446666666666667 0.477666666666667 21.0440357113184 28.9907892650394 -0.446666666666667 0.477666666666667 0.00786314761695338 0.00126159823721081 -4.10668094299292 6.12157354592952 J3QQX2 ARHGDIA J3QQX2.Y133.p_ARHGDIA J3QQX2_Y133y _1_1_133_133 J3QQX2 J3QQX2|P52565|P52565-2 Rho GDP-dissociation inhibitor 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.6308.6308.2 13.67 6.35 2.629 3 1 1 0 645.3168 1209.6578 Y133y TMT10 128 (K) YIQHTyR (K) Y(0.0)IQHT(0.0)Y(0.99)R y:Phosphorylated Y ARHGDIA 25945 4 1 135.1 23.97 HUMAN 1 -21.044 28.9908 MLAESDESGDEESVS-p P22059;S193-p MLAESDESGDEESVS 0.950061906030105 0.161907701962493 0.0106666666666667 0.172 0.440567848611149 10.3988160050744 0.0106666666666666 0.172 0.903531327493261 0.0912259510121186 0.126993338132993 2.05022505195056 P22059 OSBP P22059.S193.p_OSBP P22059_S193s _1_1_193_193 P22059 P22059 Oxysterol-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20635.20635.4 22.73 22.73 2.361 7 1 1 0 888.4186 3470.6845 S193s TMT10 186 (K) MLAESDEsGDEESVSQTDKTELQNTLR (T) MLAES(0.0)DES(0.99)GDEES(0.0)VS(0.0)QT(0.0)DKT(0.0)ELQNT(0.0)LR K:TMT10,s:Phosphorylated S OSBP 90274.8 6 2 468.1 302.79 HUMAN 1 0.4406 10.3988 MLAQSALSPYLSSPV-p Q15434;S280-p MLAQSALSPYLSSPV 0.283836044532075 0.662679746868956 0.168 0.0673333333333334 10.3191321918011 2.44743348688487 0.168 0.0673333333333334 0.092915203159697 0.569189200367405 2.03721328218774 0.605681411204876 Q15434 RBMS2 Q15434.S280.p_RBMS2 Q15434_S280s _1_1_280_280 Q15434 Q15434|F8VV01|F5H5C8 RNA-binding motif, single-stranded-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.28016.28016.3 9.71 9.71 1.352 8 1 1 0 832.0781 2414.2587 S280s TMT10 273 (R) MLAQSALsPYLSSPVSSYQR (V) MLAQS(0.0)ALS(0.99)PY(0.0)LS(0.0)S(0.0)PVS(0.0)S(0.0)Y(0.0)QR s:Phosphorylated S RBMS2 44186.1 1 4 2184.1 94.14 HUMAN 1 10.3191 2.4474 MLATGKLSPDAIPGK-p P49327;S1584-p MLATGKLSPDAIPGK 0.507195047903141 0.782466781930383 -0.179333333333333 0.057 5.43779493000054 1.4752030623269 -0.179333333333333 0.057 0.285904181374138 0.711999508381864 -1.18371574048176 0.389127269560019 P49327 FASN P49327.S1584.p_FASN P49327_S1584s _1_1_1584_1584 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25158.25158.4 14.46 12.18 2.67 2 1 1 0 624.3549 2414.4296 S1584s TMT10 1575 (R) DIMLATGKLsPDAIPGK (W) DIMLAT(0.0)GKLS(0.99)PDAIPGK K:TMT10,s:Phosphorylated S FASN 276046.1 2 17 175.1 481.87 HUMAN 1 -5.4378 1.4752 MLDKKKPTPIIPEKT-p Q53SF7;T177-p MLDKKKPTPIIPEKT 0.253428545649867 0.410075307098328 0.203 -0.087 11.3617661732278 5.15043310572391 0.203 -0.087 0.0730841806914164 0.305461647249281 2.21961342971758 -1.13132110740431 Q53SF7 COBLL1 Q53SF7.T177.p_COBLL1 Q53SF7_T177t _1_1_177_177 Q53SF7 A0A0D9SG04|Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13834.13834.4 10.32 10.32 99 1 1 1 0 537.5902 2067.3712 T177t TMT10 174 (K) KKPtPIIPEK (T) KKPT(1.0)PIIPEK K:TMT10,t:Phosphorylated T COBLL1 132526.1 1 1 163.1 494.83 HUMAN 1 11.3618 -5.1504 MLEDLDKSQEEIKKH-p P11171;S674-p MLEDLDKSQEEIKKH 0.293818205231031 0.446663991267966 -0.186666666666667 -0.0763333333333333 10.039046143674 4.66409248021287 -0.186666666666667 -0.0763333333333333 0.0991049588716185 0.341657337363403 -1.98849493735447 -1.04192655802836 P11171 EPB41 P11171.S674.p_EPB41 P11171_S674s _1_1_674_674 P11171 P11171|P11171-2|P11171-7|P11171-3|Q4VB86|P11171-4 Protein 4.1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18581.18581.4 19.08 19.08 13.065 2 1 1 0 699.8682 2716.4794 S674s TMT10 663 (R) HSNLMLEDLDKsQEEIK (K) HS(0.0)NLMLEDLDKS(0.99)QEEIK K:TMT10,s:Phosphorylated S EPB41 97585.6 4 27 469.3 302.69 HUMAN 1 -10.039 -4.6641 MLEDLHISQDATGEE-p Q96D46;S490-p MLEDLHISQDATGEE 0.367103810267829 0.0907147942259609 0.325333333333333 -0.190333333333333 8.0796196179597 13.7898842717714 0.325333333333333 -0.190333333333333 0.155610191869286 0.0417841500891812 1.64896973246307 -2.65285880513612 Q96D46 NMD3 Q96D46.S490.p_NMD3 Q96D46_S490s_1_1_490_490 Q96D46 Q96D46 60S ribosomal export protein NMD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.35895.35895.4 12.98 12.98 1.2 5 1 1 0 772.3652 2990.4536 S490s M501m TMT10 478 (R) ISLAEMLEDLHIsQDATGEEGASmLT (-) IS(0.0)LAEM(0.0)LEDLHIS(0.99)QDAT(0.0)GEEGAS(0.0)M(0.99)LT(0.0) s:Phosphorylated S,m:Oxidized methionine NMD3 58800.3 1 7 1402.1 146.41 HUMAN 1 8.0796 -13.7899 MLEMKQKSLMSLGNE-p O43149;S1392-p MLEMKQKSLMSLGNE 0.0168231449294041 0.251309449844667 -1.08166666666667 0.782666666666667 41.4628255722428 7.89831085498783 -1.08166666666667 0.782666666666667 7.14031617343215e-05 0.162244100688348 -10.8355450518554 1.61700950201512 O43149 ZZEF1 O43149.S1392.p_ZZEF1 O43149_S1392sS1395s_2_2_1392_1395 O43149 O43149 Zinc finger ZZ-type and EF-hand domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6872.6872.4 8.15 2.76 99 2 2 2 0 550.5116 2022.0942 S1392s M1394m S1395s N1398n Hydrogen 1390 (K) QKsLmsLGnEAEEK (H) QKS(1.0)LM(1.0)S(1.0)LGN(1.0)EAEEK K:TMT10-Lys-Only,s:Phosphorylated S,m:Oxidized methionine,n:Deamidated ZZEF1 335976 1 10 1481.1 138.54 HUMAN 1 -41.4628 7.8983 MLENLRQSLSLPSML-p Q96R06;S362-p MLENLRQSLSLPSML 0.858118724132037 0.0175140422218625 0.0286666666666667 -0.332333333333333 1.29492508110528 24.2117895721034 0.0286666666666667 -0.332333333333333 0.742177000710901 0.00379158715044858 0.346304517133566 -4.84108212833212 Q96R06 SPAG5 Q96R06.S362.p_SPAG5 Q96R06_S362s _1_1_362_362 Q96R06 Q96R06 Sperm-associated antigen 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30276.30276.3 14.79 14.79 1.105 5 1 1 0 918.8137 2674.4582 S362s TMT10 349 (K) GVNTSVMLENLRQsLSLPSMLR (D) GVNT(0.0)S(0.0)VMLENLRQS(0.99)LS(0.0)LPS(0.0)MLR s:Phosphorylated S SPAG5 135788.8 1 11 612.1 261.64 HUMAN 1 1.2949 -24.2118 MLEPEGMSPMEPAGV-p Q6IBW4-4;S200-p MLEPEGMSPMEPAGV 0.78149643092872 0.488416677303433 0.0403333333333333 -0.0666666666666666 2.05545817280945 4.15828223460063 0.0403333333333333 -0.0666666666666666 0.622951423715778 0.383859043275848 0.521048920548208 -0.947101917521051 Q6IBW4 NCAPH2 Q6IBW4.4.S200.p_NCAPH2 Q6IBW4-4_S200s _1_1_200_200 Q6IBW4-4 Q6IBW4-4|A0A0A6YYG7|Q6IBW4-2|Q6IBW4-5 Isoform 4 of Condensin-2 complex subunit H2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30174.30174.3 17.94 17.94 4.122 3 1 1 0 1072.1753 3134.5435 S200s TMT10 190 (R) GAFMLEPEGMsPMEPAGVSPMPGTQK (D) GAFMLEPEGMS(0.99)PMEPAGVS(0.0)PMPGT(0.0)QK K:TMT10,s:Phosphorylated S NCAPH2 68752.9 12 3 1022.1 187.64 HUMAN 1 2.0555 -4.1583 MLETLSQSPQGRVMT-p Q15365;S173-p MLETLSQSPQGRVMT 0.652424715540653 0.187952516060411 0.0666666666666667 0.132666666666667 3.47814171768456 9.55001790520833 0.0666666666666667 0.132666666666667 0.448937442581346 0.110917024233642 0.815962077207419 1.90289684870433 Q15365 PCBP1 Q15365.S173.p_PCBP1 Q15365_S173s_1_1_173_173 Q15365 Q15365 Poly(rC)-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37742.37742.3 20.62 20.62 2.13 3 1 1 0 674.9836 1959.999 Q161q S173s Hydrogen 161 (K) qICLVMLETLSQsPQGR (V) Q(1.0)ICLVMLET(0.0)LS(0.0)QS(0.99)PQGR C:Carbamidomethylation,q:Pyroglutamic acid,s:Phosphorylated S PCBP1 38010.7 43 2 1412.1 145.32 HUMAN 1 3.4781 9.55 MLGSLRDSALFVKNA-p Q9H3Q1;S109-p MLGSLRDSALFVKNA 0.635993227924701 0.0300020896282709 0.0786666666666666 -0.48 3.66449702193988 20.6060072315972 0.0786666666666667 -0.48 0.430081040572689 0.00869759691832931 0.852428837600098 -4.00633526235969 Q9H3Q1 CDC42EP4 Q9H3Q1.S109.p_CDC42EP4 Q9H3Q1_S109s _1_1_109_109 Q9H3Q1 Q9H3Q1 Cdc42 effector protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26519.26519.3 16.37 10.86 4.836 2 1 1 0 697.3763 2010.1458 S109s TMT10 101 (R) DMLGSLRDsALFVK (N) DMLGS(0.0)LRDS(0.99)ALFVK K:TMT10,s:Phosphorylated S CDC42EP4 38036.3 2 7 635.1 256.47 HUMAN 1 3.6645 -20.606 MLHKKSESPFRETEP-p Q9BYW2;S744-p MLHKKSESPFRETEP 0.446486621027392 0.447699334067867 0.101333333333333 0.102 6.4601217706468 4.65167519786721 0.101333333333333 0.102 0.225937241940501 0.342635596716804 1.36613841058678 1.03962286300992 Q9BYW2 SETD2 Q9BYW2.S744.p_SETD2 Q9BYW2_S744s _1_1_744_744 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12734.12734.5 19.66 19.66 1.147 4 1 1 0 596.5179 2898.5928 S744s TMT10 741 (K) KSEsPFRETEPLVSPHQDK (L) KS(0.0)ES(0.99)PFRET(0.0)EPLVS(0.0)PHQDK K:TMT10,s:Phosphorylated S SETD2 290615.4 7 13 58.1 711.11 HUMAN 1 6.4601 4.6517 MLIEKDPSLEKSIQF-p F8W0Q9;S343-p MLIEKDPSLEKSIQF 0.453708353731836 0.636812582303975 -0.106 -0.0493333333333333 6.33190976308452 2.66689592565162 -0.106 -0.0493333333333333 0.232706772973478 0.541140959593194 -1.3434822798424 -0.651817330588163 F8W0Q9 NotFound F8W0Q9.S343.p_NotFound F8W0Q9_S343s _1_1_343_343 F8W0Q9 Q8NEY8|Q8NEY8-3|F8W0Q9|Q8NEY8-2|Q8NEY8-8 Periphilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19798.19798.3 9.47 5.56 99 1 1 1 0 690.7238 1990.1862 S343s TMT10 336 (K) MLIEKDPsLEK (S) MLIEKDPS(1.0)LEK K:TMT10,s:Phosphorylated S PPHLN1 44796.3 1 15 663.1 251.09 HUMAN 1 -6.3319 -2.6669 MLIGKKNSPQEEVEL-p Q99933;S223-p MLIGKKNSPQEEVEL 0.283907100703039 0.0597895426255471 0.167333333333333 0.263 10.3164662738049 16.2999647460586 0.167333333333333 0.263 0.0929722566947491 0.0234424784472145 2.03674911027335 3.1237418959424 Q99933 BAG1 Q99933.S223.p_BAG1 Q99933_S223s _1_1_223_223 Q99933 Q99933|J3QTA2|Q99933-2|Q99933-3 BAG family molecular chaperone regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12461.12461.3 10.74 5.13 99 1 1 1 0 690.0486 1988.1631 S223s TMT10 221 (K) KNsPQEEVELK (K) KNS(1.0)PQEEVELK K:TMT10,s:Phosphorylated S BAG1 39006.3 2 1 5902.1 15.49 HUMAN 1 10.3165 16.3 MLKDAQHYGGWEHRD-p Q14697-2;Y585-p MLKDAQHYGGWEHRD 0.0447859715508879 0.172324810463686 0.636333333333333 -0.446 29.9333311709427 10.0403699866774 0.636333333333334 -0.446 0.00101546949804421 0.0990747536957769 6.4118650461843 -2.08248750338324 Q14697 GANAB Q14697.2.Y585.p_GANAB Q14697-2_Y585y _1_1_585_585 Q14697-2 Q14697-2 Isoform 2 of Neutral alpha-glucosidase AB GG20160819_MSz_CCLE_T4D7_pY_Injection_02.6050.6050.3 11.91 11.91 99 1 1 1 0 555.5773 1584.7505 Y585y TMT10 581 (K) DAQHyGGWEHR (D) DAQHY(1.0)GGWEHR y:Phosphorylated Y GANAB 109892.4 1 1 298.1 11.91 HUMAN 1 29.9333 -10.0404 MLKLGNKSPNGISDY-p Q9HC62;S123-p MLKLGNKSPNGISDY 0.311755810185142 0.0122744625934258 -0.142333333333333 -0.445 9.46907345423452 26.6786394234931 -0.142333333333333 -0.445 0.113003697674882 0.00214850346114899 -1.88959867896988 -5.47443972683257 Q9HC62 SENP2 Q9HC62.S123.p_SENP2 Q9HC62_S123s _1_1_123_123 Q9HC62 Q9HC62|Q9HC62-2 Sentrin-specific protease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15127.15127.4 8.66 8.66 2.235 3 1 1 0 565.0611 2177.2533 S123s TMT10 119 (K) LGNKsPNGISDYPK (I) LGNKS(0.99)PNGIS(0.0)DY(0.0)PK K:TMT10,s:Phosphorylated S SENP2 68652.1 2 4 1030.1 186.01 HUMAN 1 -9.4691 -26.6786 MLKNGHTTPIGNARS-p Q8IZ21;T109-p MLKNGHTTPIGNARS 0.152381872383781 0.652437034763859 0.326333333333333 0.065 16.4348860869492 2.53243948654713 0.326333333333333 0.065 0.0227253924194188 0.558156583115613 3.15214470815949 0.623653273763108 Q8IZ21 PHACTR4 Q8IZ21.T109.p_PHACTR4 Q8IZ21_T109t _1_1_109_109 Q8IZ21 Q8IZ21-2|Q8IZ21-3 Phosphatase and actin regulator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3812.3812.3 8.36 8.36 1.164 2 1 1 0 482.9068 1366.7389 T109t TMT10 105 (K) NGHTtPIGNAR (S) NGHT(0.0)T(0.99)PIGNAR t:Phosphorylated T PHACTR4 78438 3 2 350.1 351.04 HUMAN 1 16.4349 2.5324 MLKNKQPTPVNIRAS-p Q9Y3Y2-3;T33-p MLKNKQPTPVNIRAS 0.745224280694514 0.00479558488578419 -0.0473333333333333 -0.544333333333333 2.4243593706143 33.89838376901 -0.0473333333333333 -0.544333333333333 0.572221357009648 0.000407531912970632 -0.600855649233514 -7.6973428727722 Q9Y3Y2 CHTOP Q9Y3Y2.3.T33.p_CHTOP Q9Y3Y2-3_T33t _1_1_33_33 Q9Y3Y2-3 Q9Y3Y2-3|X6R700|Q9Y3Y2-4|A0A087X1B7 Isoform 2 of Chromatin target of PRMT1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8183.8183.3 10.12 6.19 99 1 1 1 0 568.9913 1624.9899 T33t TMT10 29 (K) NKQPtPVNIR (A) NKQPT(1.0)PVNIR K:TMT10,t:Phosphorylated T CHTOP 26524.3 3 1 4778.1 26.78 HUMAN 1 -2.4244 -33.8984 MLLEKIQSALADIAQ-p Q13503;S120-p MLLEKIQSALADIAQ 0.784971139559168 0.0890780253393475 -0.0683333333333334 0.238333333333333 2.02544528365271 13.8992790841758 -0.0683333333333334 0.238333333333333 0.627271378332818 0.0407447907322306 -0.514429735440807 2.67285510940528 Q13503 MED21 Q13503.S120.p_MED21 Q13503_S120s _1_1_120_120 Q13503 F5H872|Q13503 Mediator of RNA polymerase II transcription subunit 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.33216.33216.3 16.39 15.72 9.789 2 1 1 0 675.3782 1944.153 S120s TMT10 118 (K) IQsALADIAQSQLK (T) IQS(0.99)ALADIAQS(0.0)QLK K:TMT10,s:Phosphorylated S MED21 15735.2 1 1 5003.1 23.98 HUMAN 1 -2.0254 13.8993 MLLQGTESLNRATQS-p Q9UEU0;S138-p MLLQGTESLNRATQS 0.555476059489065 0.202332360868316 -0.0856666666666667 -0.139333333333333 4.71401863149756 9.12973006285779 -0.0856666666666667 -0.139333333333333 0.337752161351435 0.12218756038787 -1.0513799298415 -1.83015345515148 Q9UEU0 VTI1B Q9UEU0.S138.p_VTI1B Q9UEU0_S138s _1_1_138_138 Q9UEU0 Q9UEU0|Q9UEU0-2 Vesicle transport through interaction with t-SNAREs homolog 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19284.19284.2 11.79 11.79 1.221 2 1 1 0 821.4164 1561.8569 S138s TMT10 130 (R) AMLLQGTEsLNR (A) AMLLQGT(0.0)ES(0.99)LNR s:Phosphorylated S VTI1B 26688 3 2 3781.1 43.22 HUMAN 1 -4.714 -9.1297 MLMEDVGSEEEQEEE-p Q9H1E3;S113-p MLMEDVGSEEEQEEE 0.459669818817872 0.00366823110692036 -0.104 0.839333333333333 6.22334100298471 36.1651961820265 -0.104 0.839333333333333 0.23859750595329 0.000241813410210466 -1.32425402288681 8.53321739969988 Q9H1E3 NUCKS1 Q9H1E3.S113.p_NUCKS1 Q9H1E3_S113s_1_1_113_113 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23547.23547.3 21.9 21.9 99 1 1 1 0 1145.1466 3370.4776 Q103q S113s Hydrogen 103 (K) qREMLMEDVGsEEEQEEEDEAPFQEK (D) Q(1.0)REMLMEDVGS(1.0)EEEQEEEDEAPFQEK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S NUCKS1 27295.9 18 10 48.1 767.83 HUMAN 1 -6.2233 36.1652 MLPAFMCSPKSSENQ-p Q5JSZ5;S288-p MLPAFMCSPKSSENQ 0.538685971667493 0.0395317449326969 -0.0853333333333333 -0.300333333333333 4.96585195207898 18.8189568090117 -0.0853333333333334 -0.300333333333333 0.318724027594045 0.0131251513201987 -1.09779655068724 -3.62680381315462 Q5JSZ5 PRRC2B Q5JSZ5.S288.p_PRRC2B Q5JSZ5_S288s _1_1_288_288 Q5JSZ5 Q5JSZ5|Q5JSZ5-5|A0A1W2PQP5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26766.26766.4 24.96 24.96 11.895 5 1 1 0 906.1675 3541.693 S288s TMT10 264 (K) GASQFMGNVYHPPTYHDMLPAFMCsPK (S) GAS(0.0)QFMGNVY(0.0)HPPT(0.0)Y(0.0)HDMLPAFMCS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRRC2B 244103.4 6 53 36.2 882.05 HUMAN 1 -4.9659 -18.819 MLPSGVLSGGKQTLQ-p Q08209;S438-p MLPSGVLSGGKQTLQ 0.220429799240414 0.174805280615275 -0.208666666666667 0.185333333333333 12.6439168617966 9.96229953646801 -0.208666666666667 0.185333333333333 0.0544011792316452 0.10087186403976 -2.4470962403668 1.97436630012551 Q08209 PPP3CA Q08209.S438.p_PPP3CA Q08209_S438s _1_1_438_438 Q08209 Q08209|Q08209-2|Q08209-3|Q08209-5|E7ETC2|Q08209-4 Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27734.27734.3 15.1 14.8 3.114 4 1 1 0 704.0532 2030.172 S438s TMT10 425 (K) GLTPTGMLPSGVLsGGK (Q) GLT(0.0)PT(0.0)GMLPS(0.0)GVLS(0.99)GGK K:TMT10,s:Phosphorylated S PPP3CA 59371.4 1 5 3004.1 63.48 HUMAN 1 -12.6439 9.9623 MLQDDDDTVHLPFEG-p Q9Y6M7-13;T1052-p MLQDDDDTVHLPFEG 0.180506867288736 0.0614304307562285 0.261333333333333 -0.225 14.6647145910401 16.1316810309537 0.261333333333333 -0.225 0.0341608399715112 0.0243686739343447 2.81580145257368 -3.09130878623307 Q9Y6M7 SLC4A7 Q9Y6M7.13.T1052.p_SLC4A7 Q9Y6M7-13_T1052t _1_1_1052_1052 Q9Y6M7-13 Q9Y6M7-7|Q9Y6M7-8|E9PFN4|Q9Y6M7-12|A0A0A0MST8|Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-9|Q9Y6M7-2|Q9Y6M7-3|Q9Y6M7-4|Q9Y6M7-5 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.35022.35022.4 22.18 15.48 6.355 2 1 1 0 802.1635 3125.6593 T1052t TMT10 1045 (R) MLQDDDDtVHLPFEGGSLLQIPVK (A) MLQDDDDT(0.99)VHLPFEGGS(0.0)LLQIPVK K:TMT10,t:Phosphorylated T SLC4A7 128884.6 15 12 207.1 445.25 HUMAN 1 14.6647 -16.1317 MLREMRGSITFKIVP-p O14936-3;S556-p MLREMRGSITFKIVP 0.542936619096718 0.10359303130802 0.0806666666666667 0.361666666666667 4.89673380966612 13.0068517152566 0.0806666666666667 0.361666666666667 0.323837112938264 0.0500397151105826 1.08509961830396 2.51092312420239 O14936 CASK O14936.3.S556.p_CASK O14936-3_S556s _1_1_556_556 O14936-3 O14936|O14936-2|O14936-6|O14936-4|O14936-3|Q5JS74|O14936-5|Q5JS72 Isoform 3 of Peripheral plasma membrane protein CASK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14487.14487.3 10.24 10.24 2.351 2 1 1 0 536.2867 1526.8765 S556s TMT10 552 (R) EMRGsITFK (I) EMRGS(0.99)IT(0.0)FK K:TMT10,s:Phosphorylated S CASK 103024.6 1 8 1824.1 112.53 HUMAN 1 4.8967 13.0069 MLRERSPSPPTIQSK-p Q14687;S828-p MLRERSPSPPTIQSK 0.681920528763249 0.578205581535789 0.063 0.055 3.11704487359164 3.21024199363923 0.063 0.055 0.48786033834165 0.477502665945158 0.744086801912806 0.762689262555884 Q14687 GSE1 Q14687.S828.p_GSE1 Q14687_S828s _1_1_828_828 Q14687 Q14687|Q14687-3 Genetic suppressor element 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12179.12179.3 8.36 8.36 1.119 4 1 1 0 527.2889 1499.8834 S828s TMT10 826 (R) SPsPPTIQSK (R) S(0.0)PS(0.99)PPT(0.0)IQS(0.0)K K:TMT10,s:Phosphorylated S GSE1 136446.7 2 9 221.1 428.09 HUMAN 1 3.117 3.2102 MLSTSEYSQSPKMES-p Q12888-2;S528-p MLSTSEYSQSPKMES 0.285640692994416 0.032895332674453 0.225333333333333 0.407 10.2693045068539 20.0023384874379 0.225333333333333 0.407 0.0939873812927494 0.00999461688310298 2.02853915225806 3.87582494065411 Q12888 TP53BP1 Q12888.2.S528.p_TP53BP1 Q12888-2_S528sS530s_2_2_528_530 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18323.18323.4 15.54 15.54 1.394 9 2 2 0 758.8536 2856.4636 M521m S528s S530s TMT10 520 (K) LmLSTSEYsQsPKMESLSSHR (I) LM(0.99)LS(0.0)T(0.0)S(0.0)EY(0.0)S(0.99)QS(0.99)PKM(0.0)ES(0.0)LS(0.0)S(0.0)HR K:TMT10,m:Oxidized methionine,s:Phosphorylated S TP53BP1 216167.2 11 89 3.1 2297.07 HUMAN 1 10.2693 20.0023 MLTKGVGSDDGEDEN-p Q14D04;S462-p MLTKGVGSDDGEDEN 0.893524886023346 0.160767472674573 0.0256666666666667 -0.179 0.955110898293148 10.4413940921934 0.0256666666666667 -0.179 0.802581066482188 0.0903359447356146 0.262580253745751 -2.05763719991969 Q14D04 VEPH1 Q14D04.S462.p_VEPH1 Q14D04_S462s _1_1_462_462 Q14D04 Q14D04|Q14D04-2 Ventricular zone-expressed PH domain-containing protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27214.27214.5 23.45 16.35 3.684 6 1 1 0 1043.1168 5131.5911 S462s TMT10 459 (K) GVGsDDGEDENRGDIPASISLSEIDPLGQGNDKLPFKTDTER (S) GVGS(0.99)DDGEDENRGDIPAS(0.0)IS(0.0)LS(0.0)EIDPLGQGNDKLPFKT(0.0)DT(0.0)ER K:TMT10,s:Phosphorylated S VEPH1 95542.4 2 8 341.1 353.64 HUMAN 1 0.9551 -10.4414 MMAMNGKSVDGRQIR-p Q14011;S71-p MMAMNGKSVDGRQIR 0.433439498856142 0.115191430933863 -0.153333333333333 0.213666666666667 6.68898786635457 12.3829243775004 -0.153333333333333 0.213666666666667 0.214339006508255 0.0577706910060336 -1.40645464732184 2.39920239204763 Q14011 CIRBP Q14011.S71.p_CIRBP Q14011_S71s _1_1_71_71 Q14011 D6W5Y5|Q14011-2|K7EQR7|K7EPM4|K7EMY9 Cold-inducible RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13427.13427.3 10.42 5.46 99 1 1 1 0 674.3195 1940.9756 S71s TMT10 62 (K) DAMMAMNGKsVDGR (Q) DAMMAMNGKS(1.0)VDGR K:TMT10,s:Phosphorylated S CIRBP 18647.7 1 1 2655.1 74.98 HUMAN 1 -6.689 12.3829 MMDAPPLSPFPHIKQ-p P28749;S964-p MMDAPPLSPFPHIKQ 0.175114346915946 0.00104745705872082 -0.304 -1.172 15.0714203173434 51.1031295485869 -0.304 -1.172 0.0311069884730431 7.75687950419097e-06 -2.89185687714325 -16.4587964172584 P28749 RBL1 P28749.S964.p_RBL1 P28749_S964s _1_1_964_964 P28749 P28749|P28749-2 Retinoblastoma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25065.25065.4 24.53 24.79 19.793 2 1 1 0 769.6276 2995.521 S964s TMT10 949 (K) YDLANQDHMMDAPPLsPFPHIK (Q) Y(0.0)DLANQDHMMDAPPLS(0.99)PFPHIK K:TMT10,s:Phosphorylated S RBL1 122214.1 2 9 566.1 270.71 HUMAN 1 -15.0714 -51.1031 MMEKLTSSCPDLPSQ-p P56962;S289-p MMEKLTSSCPDLPSQ 0.28377835512685 0.0882457681284552 -0.192666666666667 -0.256666666666667 10.3256305351273 13.9546907308066 -0.192666666666667 -0.256666666666667 0.0927762782108609 0.0402282302251071 -2.03834476986564 -2.68300023151147 P56962 STX17 P56962.S289.p_STX17 P56962_S289s _1_1_289_289 P56962 P56962 Syntaxin-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15950.15950.2 13.16 10.14 1.146 5 1 1 0 1044.0116 2007.0469 S289s TMT10 286 (K) LTSsCPDLPSQTDK (K) LT(0.0)S(0.0)S(0.99)CPDLPS(0.0)QT(0.0)DK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S STX17 33631.1 5 2 4255.1 34.61 HUMAN 1 -10.3256 -13.9547 MMHPLKVSLEDLYNG-p O60884;S123-p MMHPLKVSLEDLYNG 0.699674004566978 0.785850165037625 -0.0546666666666667 0.0333333333333333 2.91344933833233 1.45189868665167 -0.0546666666666667 0.0333333333333334 0.511275598959749 0.71583038879452 -0.702777383599305 0.383642573660169 O60884 DNAJA2 O60884.S123.p_DNAJA2 O60884_S123s_1_1_123_123 O60884 O60884 DnaJ homolog subfamily A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21688.21688.5 14.42 10.97 1.749 2 1 1 0 575.0928 2790.4683 S123s N129n Hydrogen 112 (R) RGEDMMHPLKVsLEDLYnGK (T) RGEDMMHPLKVS(0.99)LEDLY(0.0)N(1.0)GK K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated DNAJA2 46372.4 8 1 3136.1 59.77 HUMAN 1 -2.9134 1.4519 MMKKYSPSDPAFAYA-p Q6WKZ4;S1216-p MMKKYSPSDPAFAYA 0.551931763784542 0.155477076231445 -0.0786666666666667 -0.154333333333333 4.76361005989721 10.630028954639 -0.0786666666666667 -0.154333333333333 0.333917356825852 0.0864962152008802 -1.060554818745 -2.09050670317388 Q6WKZ4 RAB11FIP1 Q6WKZ4.S1216.p_RAB11FIP1 Q6WKZ4_S1216s _1_1_1216_1216 Q6WKZ4 Q6WKZ4|Q6WKZ4-3|Q6WKZ4-1|E7EX40 Rab11 family-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35312.35564.4 21.94 21.94 1.169 5 1 1 0 904.4958 3534.9815 S1216s TMT10 1212 (K) KYSPsDPAFAYAQLTHDELIQLVLK (Q) KY(0.0)S(0.0)PS(0.99)DPAFAY(0.0)AQLT(0.0)HDELIQLVLK K:TMT10,s:Phosphorylated S RAB11FIP1 137564.1 5 21 56.1 721.17 HUMAN 1 -4.7636 -10.63 MMNSSISSGSGSLRT-p Q12959-2;S571-p MMNSSISSGSGSLRT 0.766517754898204 0.183863663103825 0.043 0.138333333333333 2.214865738213 9.67143898060065 0.043 0.138333333333333 0.600500573047124 0.107858928590933 0.555876793387388 1.92393099075432 Q12959 DLG1 Q12959.2.S571.p_DLG1 Q12959-2_S571s _1_1_571_571 Q12959-2 Q12959-2|Q12959-7|Q12959-4|A0A0C4DFT3|Q12959-6|Q12959-3|Q12959-5|Q12959-9|Q12959-8|E7EQD7 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12662.13000.2 15.49 15.49 1.116 6 1 1 0 990.4419 1899.9102 S571s TMT10 562 (R) EQMMNSSISsGSGSLR (T) EQMMNS(0.0)S(0.0)IS(0.0)S(0.99)GS(0.0)GS(0.0)LR s:Phosphorylated S DLG1 103604.4 31 17 196.1 460.79 HUMAN 1 2.2149 9.6714 MMRAIAMSLGQDIPM-p Q7Z6Z7;S1382-p MMRAIAMSLGQDIPM 0.667135014173568 0.827200498375882 -0.0766666666666667 0.033 3.28612388925946 1.15346192944475 -0.0766666666666667 0.033 0.469231988372829 0.766750039549129 -0.777951559195576 0.311910398224395 Q7Z6Z7 HUWE1 Q7Z6Z7.S1382.p_HUWE1 Q7Z6Z7_S1382s_1_1_1382_1382 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15523.15523.4 8.03 8.03 2.232 2 1 1 0 775.6146 3003.4535 M1381m S1382s TMT10 1378 (R) AIAmsLGQDIPMDQRAESPEEVACR (K) AIAM(0.99)S(0.99)LGQDIPM(0.0)DQRAES(0.0)PEEVACR C:Carbamidomethylation,m:Oxidized methionine,s:Phosphorylated S HUWE1 485818.9 2 10 11.1 1210.45 HUMAN 1 -3.2861 1.1535 MMSALDLSGNADDGV-p Q9NVN8;S573-p MMSALDLSGNADDGV 0.899294775361382 0.086514435220883 0.026 -0.208 0.901880147110572 14.0733767670352 0.026 -0.208 0.812478701841143 0.0391437404686604 0.249081704980439 -2.70476770505859 Q9NVN8 GNL3L Q9NVN8.S573.p_GNL3L Q9NVN8_S573s _1_1_573_573 Q9NVN8 Q9NVN8 Guanine nucleotide-binding protein-like 3-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32347.32562.3 15.44 15.44 7.08 4 1 1 0 793.6684 2299.0267 S573s TMT10 562 (K) LSDSMMSALDLsGNADDGVGD (-) LS(0.0)DS(0.0)MMS(0.0)ALDLS(0.99)GNADDGVGD s:Phosphorylated S GNL3L 66256.7 5 4 3327.1 53.86 HUMAN 1 0.9019 -14.0734 MMVALGRSPSDEYKD-p Q9UKD2;S80-p MMVALGRSPSDEYKD 0.357905212489512 0.0187127251255253 -0.158666666666667 0.348 8.29531963614949 23.7733231012949 -0.158666666666667 0.348 0.148070327306083 0.00419437918873358 -1.68635574263537 4.73412235248505 Q9UKD2 MRTO4 Q9UKD2.S80.p_MRTO4 Q9UKD2_S80s _1_1_80_80 Q9UKD2 Q9UKD2 mRNA turnover protein 4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21311.21311.3 16.85 16.85 1.342 3 1 1 0 741.0425 2141.1499 S80s TMT10 72 (K) VMMVALGRsPSDEYK (D) VMMVALGRS(0.99)PS(0.0)DEY(0.0)K K:TMT10,s:Phosphorylated S MRTO4 27674.1 6 1 4618.1 28.71 HUMAN 1 -8.2953 23.7733 MNDKSPLTPEKEVGY-p Q14289;T842-p MNDKSPLTPEKEVGY 0.111056503067529 0.00553211891335055 -0.577 0.554666666666667 19.959932869467 32.7242418186379 -0.577 0.554666666666667 0.0100926848659905 0.000534042497352889 -3.8703568028113 7.29278814254389 Q14289 PTK2B Q14289.T842.p_PTK2B Q14289_T842t _1_1_842_842 Q14289 Q14289|Q14289-2 Protein-tyrosine kinase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11829.11829.2 8.9 5.06 1.965 2 1 1 0 655.3623 1229.7506 T842t TMT10 839 (K) SPLtPEK (E) S(0.0)PLT(0.99)PEK K:TMT10,t:Phosphorylated T PTK2B 117184.8 1 18 979.2 192.68 HUMAN 1 -19.9599 32.7242 MNEVLDMSDDEGEDA-p Q12955-7;S468-p MNEVLDMSDDEGEDA 0.49807304671179 0.053912882138571 -0.116 0.265666666666667 5.57787948885972 16.9076602239106 -0.116 0.265666666666667 0.276829297808313 0.020381398366423 -1.20898288775748 3.24201611954479 Q12955 ANK3 Q12955.7.S468.p_ANK3 Q12955-7_S468s_1_1_468_468 Q12955-7 Q12955-7 Isoform 5 of Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29706.29706.3 10.97 10.97 2.357 4 1 1 0 1210.1777 3547.5473 N462n S468s TMT10 455 (K) MNVPETMnEVLDMsDDEGEDAMTGDTDK (Y) MN(0.0)VPET(0.0)MN(0.99)EVLDMS(0.99)DDEGEDAMT(0.0)GDT(0.0)DK K:TMT10,n:Deamidated,s:Phosphorylated S ANK3 162142 2 47 135.4 530.51 HUMAN 1 -5.5779 16.9077 MNEVLDMSDDEGNRC-p D6RF31;S14-p MNEVLDMSDDEGNRC 0.704571607940758 0.0310908781831712 -0.061 0.305 2.85927607804076 20.365042319548 -0.061 0.305 0.517693118606063 0.00919381515905962 -0.691681818876666 3.95394766501967 D6RF31 NotFound D6RF31.S14.p_NotFound D6RF31_S14s _1_1_14_14 D6RF31 D6RF31 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27980.27980.5 20.91 20.91 3.539 4 1 1 0 715.3167 3492.5944 S14s TMT10 1 (-) MNVPETMNEVLDMsDDEGNRCTWYK (I) MNVPET(0.0)MNEVLDMS(0.99)DDEGNRCT(0.0)WY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANK3 9703.6 15 1 135.5 530.51 HUMAN 1 -2.8593 20.365 MNEVLDMSDDEVRKA-p Q12955;S847-p MNEVLDMSDDEVRKA 0.254996768567997 0.0120572634621111 -0.188 0.377666666666667 11.2899401459558 26.7987194093031 -0.188 0.377666666666667 0.0743029378184945 0.00208991228597498 -2.20698445588973 5.50671620483225 Q12955 ANK3 Q12955.S847.p_ANK3 Q12955_S847s _1_1_847_847 Q12955 Q12955|Q12955-4|Q12955-5 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28709.28709.3 19.22 19.22 7.737 2 1 1 0 845.0348 2453.1196 S847s TMT10 834 (K) MNVPETMNEVLDMsDDEVR (K) MNVPET(0.0)MNEVLDMS(0.99)DDEVR s:Phosphorylated S ANK3 482683.6 8 7 135.1 530.51 HUMAN 1 -11.2899 26.7987 MNLISKLSAKFGGQA-p P50502;S362-p MNLISKLSAKFGGQA 0.340598519827263 0.716751455632534 -0.141 0.055 8.70092725684726 1.98969800451403 -0.141 0.055 0.134867489791788 0.632455828947381 -1.7565928859255 0.506460688100088 P50502 ST13 P50502.S362.p_ST13 P50502_S362s _1_1_362_362 P50502 P50502|Q8NFI4 Hsc70-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25961.25961.3 7.79 7.79 7.786 2 1 1 0 657.7277 1891.2018 S362s TMT10 354 (K) VMNLISKLsAK (F) VMNLIS(0.0)KLS(0.99)AK K:TMT10,s:Phosphorylated S ST13 41502.2 1 6 2700.1 73.52 HUMAN 1 -8.7009 1.9897 MNNGSGDSGEKHWKP-p Q9Y6N7-2;S1098-p MNNGSGDSGEKHWKP 0.902395780902025 0.221766373427964 0.0226666666666667 -0.144666666666667 0.876341877047464 8.61333232742591 0.0226666666666667 -0.144666666666667 0.817270479832414 0.137615314585891 0.24256582700045 -1.74083186696395 Q9Y6N7 ROBO1 Q9Y6N7.2.S1098.p_ROBO1 Q9Y6N7-2_S1098s _1_1_1098_1098 Q9Y6N7-2 Q9Y6N7|Q9Y6N7-3|Q9Y6N7-4|Q9Y6N7-5|A0A087WTM1|A0A0A0MSX4|A0A087WZ85|Q9Y6N7-2 Isoform 2 of Roundabout homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27395.27395.4 19.66 15.84 2.15 9 1 1 0 1052.2593 4126.0188 S1098s TMT10 1067 (R) FVNPSGQPTPYATTQLIQSNLSNNMNNGSGDsGEK (H) FVNPS(0.0)GQPT(0.0)PY(0.0)AT(0.0)T(0.0)QLIQS(0.0)NLS(0.0)NNMNNGS(0.0)GDS(0.99)GEK K:TMT10,s:Phosphorylated S ROBO1 182465.9 6 5 832.1 215.62 HUMAN 1 0.8763 -8.6133 MNQRISQSAPVKQPP-p P46937-9;S276-p MNQRISQSAPVKQPP 0.34218498210401 0.506982273852847 -0.270666666666667 -0.068 8.65118129954507 3.95255608743554 -0.270666666666667 -0.068 0.136421201462155 0.402480080570016 -1.74798129264353 -0.907897303469175 P46937 YAP1 P46937.9.S276.p_YAP1 P46937-9_S276s _1_1_276_276 P46937-9 P46937-9|P46937-8|P46937-2|P46937-7|P46937-6|P46937-3|P46937-5|P46937-4 Isoform 9 of Transcriptional coactivator YAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11762.11762.2 9.15 2.83 2.506 2 1 1 0 684.3885 1287.8037 S276s TMT10 273 (R) ISQsAPVK (Q) IS(0.0)QS(0.99)APVK K:TMT10,s:Phosphorylated S YAP1 54998.2 7 11 436.1 313.01 HUMAN 1 -8.6512 -3.9526 MNRNSVLSDPGLDSP-p O15085-2;S285-p MNRNSVLSDPGLDSP 0.760872396292211 0.080718901767953 0.0453333333333333 0.214 2.27799080743158 14.4964438017278 0.0453333333333333 0.214 0.591835373830322 0.035510404535729 0.569521443358076 2.78278985039682 O15085 ARHGEF11 O15085.2.S285.p_ARHGEF11 O15085-2_S285s _1_1_285_285 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15819.15819.2 10.43 5.27 3.109 3 1 1 0 833.4064 1585.8383 S285s TMT10 281 (R) NSVLsDPGLDSPR (T) NS(0.0)VLS(0.99)DPGLDS(0.0)PR s:Phosphorylated S ARHGEF11 173153.4 3 4 228.1 424.05 HUMAN 1 2.278 14.4964 MNRPRAATVVARGPL-p P10644;T338-p MNRPRAATVVARGPL 0.0198229955984014 0.000952253650599092 -1.12333333333333 -1.52233333333333 39.6967727848094 53.31040082961 -1.12333333333333 -1.52233333333333 0.000107231584045946 4.66616312240986e-06 -10.0187280664347 -18.1028794385149 P10644 PRKAR1A P10644.T338.p_PRKAR1A P10644_T338t _1_1_338_338 P10644 P10644|P31321 cAMP-dependent protein kinase type I-alpha regulatory subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6594.6594.2 9.41 1.86 99 1 1 1 0 498.7756 916.5777 T338t TMT10 336 (R) AAtVVAR (G) AAT(1.0)VVAR t:Phosphorylated T PRKAR1A 43209.1 1 2 3134.1 59.83 HUMAN 1 -39.6968 -53.3104 MNTHSDDSGDDDEAT-p Q969R2;S287-p MNTHSDDSGDDDEAT 0.203454009826202 0.753734241175426 0.252666666666667 -0.069 13.4081547804879 1.69627040640876 0.252666666666667 -0.069 0.0456230716941329 0.676663824987985 2.58488093947116 -0.440388072415977 Q969R2 OSBP2 Q969R2.S287.p_OSBP2 Q969R2_S284sS287s_2_2_284_287 Q969R2 Q969R2|Q969R2-2|Q969R2-3|Q6ZN50 Oxysterol-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12408.12408.5 17.18 17.18 1.645 7 2 2 0 803.5685 3853.8754 S284s S287s TMT10 279 (R) VMNTHsDDsGDDDEATTPADKSELHHTLK (N) VMNT(0.0)HS(0.99)DDS(0.99)GDDDEAT(0.0)T(0.0)PADKS(0.0)ELHHT(0.0)LK K:TMT10,s:Phosphorylated S OSBP2 102233.9 3 4 3264.1 55.6 HUMAN 1 13.4082 -1.6963 MNYPSNKS_______-p Q96EB6;S747-p MNYPSNKS_______ 0.178245262156371 0.0206743632343323 0.213333333333333 0.328666666666667 14.7943381938932 23.0495647662611 0.213333333333333 0.328666666666667 0.0331563091697276 0.00495499845463896 2.83996739163332 4.56103171896962 Q96EB6 SIRT1 Q96EB6.S747.p_SIRT1 Q96EB6_S747s _1_1_747_747 Q96EB6 Q96EB6|Q96EB6-2|E9PC49|B0QZ35 NAD-dependent protein deacetylase sirtuin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30729.30729.5 25.16 23.93 1.313 6 1 1 0 897.4308 4403.1552 S747s TMT10 712 (R) AGGAGFGTDGDDQEAINEAISVKQEVTDMNYPSNKs (-) AGGAGFGT(0.0)DGDDQEAINEAIS(0.0)VKQEVT(0.0)DMNY(0.0)PS(0.0)NKS(0.99) K:TMT10,s:Phosphorylated S SIRT1 82763.6 3 9 475.1 301.26 HUMAN 1 14.7943 23.0496 MPAKRRKTMQGEGPQ-p P46379-3;T1083-p MPAKRRKTMQGEGPQ 0.704155436204413 0.714460681798457 0.066 -0.0513333333333333 2.86401275752786 2.00933944723066 0.066 -0.0513333333333333 0.517128798833709 0.629601936704912 0.69265377241822 -0.510809926551518 P46379 BAG6 P46379.3.T1083.p_BAG6 P46379-3_T1083t _1_1_1083_1083 P46379-3 P46379-3 Isoform 3 of Large proline-rich protein BAG6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27370.27370.3 17.63 17.63 17.627 3 1 1 0 709.0234 2045.0899 T1083t TMT10 1083 (K) tMQGEGPQLLLSEAVSR (A) T(0.99)MQGEGPQLLLS(0.0)EAVS(0.0)R t:Phosphorylated T BAG6 122796.4 1 8 590.1 264.42 HUMAN 1 2.864 -2.0093 MPAYARHTGQVGTKL-p Q9NZJ5;T982-p MPAYARHTGQVGTKL 0.615123191884599 0.135134303426857 -0.107666666666667 -0.241 3.91661567497891 11.4596123908239 -0.107666666666667 -0.241 0.405824659093306 0.0714560097940674 -0.901156712207839 -2.23577788457745 Q9NZJ5 EIF2AK3 Q9NZJ5.T982.p_EIF2AK3 Q9NZJ5_T982t _1_1_982_982 Q9NZJ5 Q9NZJ5|E7ER02 Eukaryotic translation initiation factor 2-alpha kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27181.27181.5 24.77 20.64 2.199 6 1 1 0 886.8336 4350.1786 T982t TMT10 953 (K) VGDFGLVTAMDQDEEEQTVLTPMPAYARHtGQVGTK (L) VGDFGLVT(0.0)AMDQDEEEQT(0.0)VLT(0.0)PMPAY(0.0)ARHT(0.99)GQVGT(0.0)K K:TMT10,t:Phosphorylated T EIF2AK3 126241 3 9 1191.1 168.13 HUMAN 1 -3.9166 -11.4596 MPCEGKGSPSPEKPD-p Q93074-2;S698-p MPCEGKGSPSPEKPD 0.31256339718322 0.00631676370131831 -0.228 0.713 9.45235714492525 31.6694130230567 -0.228 0.713 0.11343949526598 0.000680861375272147 -1.88670197569242 6.94474882686832 Q93074 MED12 Q93074.2.S698.p_MED12 Q93074-2_S698s _1_1_698_698 Q93074-2 Q93074-2|Q93074-3|Q7Z3Z5 Isoform 2 of Mediator of RNA polymerase II transcription subunit 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10184.10184.3 13.23 6.56 2.013 2 1 1 0 679.7015 1957.1209 S698s TMT10 697 (K) GsPSPEKPDVEK (E) GS(0.99)PS(0.0)PEKPDVEK K:TMT10,s:Phosphorylated S MED12 246128.1 2 5 2302.1 89.02 HUMAN 1 -9.4524 31.6694 MPDRWGHSGYKELYP-p Q6ZUT1-2;S111-p MPDRWGHSGYKELYP 0.0360407965324359 0.287893684983499 -0.748333333333333 -0.16 33.2824001125494 7.13573121272984 -0.748333333333334 -0.16 0.000469634495090792 0.19338682297718 -7.49639403433447 -1.48433386527963 Q6ZUT1 C11orf57 Q6ZUT1.2.S111.p_C11orf57 Q6ZUT1-2_S111s _1_1_111_111 Q6ZUT1-2 Q6ZUT1-2|Q6ZUT1-3 Isoform 2 of Uncharacterized protein NKAPD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19631.19631.4 17.59 17.59 6.313 4 1 1 0 694.3175 2694.2811 S111s TMT10 97 (K) FYDYEANMPDRWGHsGYK (E) FY(0.0)DY(0.0)EANMPDRWGHS(0.99)GY(0.0)K K:TMT10,s:Phosphorylated S NKAPD1 34196.3 2 4 1271.1 159.85 HUMAN 1 -33.2824 -7.1357 MPDVHFKSPQISMSD-p Q09666;S4516-p MPDVHFKSPQISMSD 0.100718023880825 0.138057980544252 -0.363 -0.167333333333333 21.0863700947682 11.3302335485274 -0.363 -0.167333333333333 0.00778687118719092 0.0736167507891923 -4.11607377462672 -2.21303533723462 Q09666 AHNAK Q09666.S4516.p_AHNAK Q09666_S4516s _1_1_4516_4516 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28048.28048.4 21.82 17.47 3.133 3 1 1 0 796.42 3102.6935 S4516s TMT10 4509 (K) MPDVHFKsPQISMSDIDLNLK (G) MPDVHFKS(0.99)PQIS(0.0)MS(0.0)DIDLNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 6 98 1.1 4313.36 HUMAN 1 -21.0864 -11.3302 MPEIRDNSPEPNDPE-p Q9HB58-6;S256-p MPEIRDNSPEPNDPE 0.902738973298693 0.0271115382940129 0.0216666666666667 0.312333333333333 0.873972336103877 21.2600250959019 0.0216666666666667 0.312333333333333 0.817716509966331 0.00748165177192556 0.241959932009645 4.15053605886618 Q9HB58 SP110 Q9HB58.6.S256.p_SP110 Q9HB58-6_S256s _1_1_256_256 Q9HB58-6 Q9HB58-6|Q9HB58-7|Q9HB58-3|Q9HB58-5|G5E9C0|Q9HB58-2 Isoform 6 of Sp110 nuclear body protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9690.9690.3 18.1 18.1 3.383 5 1 1 0 903.0533 2627.1794 S256s Hydrogen 254 (R) DNsPEPNDPEEPQEVSSTPSDK (K) DNS(0.99)PEPNDPEEPQEVS(0.0)S(0.0)T(0.0)PS(0.0)DK K:TMT10-Lys-Only,s:Phosphorylated S SP110 82536.7 1 4 1355.1 150.64 HUMAN 1 0.874 21.26 MPERASESSSEEKDD-p P18583-5;S1782-p MPERASESSSEEKDD 0.243874322834316 0.300245129802362 -0.172666666666667 -0.105 11.7230686823395 6.89718361007402 -0.172666666666667 -0.105 0.0672501305518896 0.204306243654307 -2.28330884830716 -1.44261076690877 P18583 SON P18583.5.S1782.p_SON P18583-5_S1782s _1_1_1782_1782 P18583-5 P18583-9|P18583-5|P18583-6|P18583-7|P18583-4|P18583-3|P18583-10|P18583-2 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20894.20894.3 17.37 17.37 1.111 5 1 1 0 910.7843 2650.3703 S1782s TMT10 1779 (R) ASEsSSEEKDDYEIFVK (V) AS(0.0)ES(0.99)S(0.0)S(0.0)EEKDDY(0.0)EIFVK K:TMT10,s:Phosphorylated S SON 267429.6 10 29 45.1 778.56 HUMAN 1 -11.7231 -6.8972 MPESEGPSSLDPSQE-p Q13501;S365-p MPESEGPSSLDPSQE 0.967385376512077 0.313831229480946 -0.00900000000000002 0.0963333333333334 0.280097958627748 6.65215300505836 -0.00900000000000003 0.0963333333333334 0.937540859696138 0.216164662663412 -0.0820706144568923 1.3996086279313 Q13501 SQSTM1 Q13501.S365.p_SQSTM1 Q13501_S365sS366s_2_2_365_366 Q13501 Q13501|Q13501-2 Sequestosome-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27755.27755.3 16.49 16.49 1.267 8 2 2 0 1382.3077 3984.9636 S365s S366s TMT10 345 (K) EVDPSTGELQSLQMPESEGPssLDPSQEGPTGLK (E) EVDPS(0.0)T(0.0)GELQS(0.0)LQMPES(0.0)EGPS(0.99)S(0.99)LDPS(0.0)QEGPT(0.0)GLK K:TMT10,s:Phosphorylated S SQSTM1 48485.1 2 18 541.1 276.49 HUMAN 1 -0.2801 6.6522 MPFLSISSPKVSMPD-p Q09666;S3412-p MPFLSISSPKVSMPD 0.267509385465911 0.00938586319899589 0.651 -0.771666666666667 10.8504158832644 28.6171881395179 0.651 -0.771666666666667 0.0822163915217716 0.00137493189314851 2.12992355688058 -6.01322866019945 Q09666 AHNAK Q09666.S3412.p_AHNAK Q09666_S3412s_1_1_3412_3412 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34307.34307.5 16.87 16.87 1.111 4 1 1 0 721.809 3524.0442 S3412s N3423n TMT10 3403 (K) FKMPFLSISsPKVSMPDVELnLK (S) FKMPFLS(0.0)IS(0.0)S(0.99)PKVS(0.0)MPDVELN(1.0)LK K:TMT10,s:Phosphorylated S,n:Deamidated AHNAK 629603.7 1 86 1.1 4313.36 HUMAN 1 10.8504 -28.6172 MPGPPLNSESGEEAP-p O15446-2;S490-p MPGPPLNSESGEEAP 0.255523666986709 0.49686047046344 0.239 0.075 11.2646524066504 4.06296579484062 0.239 0.075 0.0747368448422761 0.392376889904458 2.20254069899048 0.928987415606185 O15446 CD3EAP O15446.2.S490.p_CD3EAP O15446-2_S490sS492s_2_2_490_492 O15446-2 O15446-2 Isoform 2 of DNA-directed RNA polymerase I subunit RPA34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23316.23316.3 13.42 13.42 4.745 4 2 2 0 1086.1364 3095.4499 N489n S490s S492s TMT10 474 (R) MPETVPQEEMPGPPLnsEsGEEAPTGR (D) MPET(0.0)VPQEEMPGPPLN(1.0)S(0.99)ES(0.99)GEEAPT(0.0)GR n:Deamidated,s:Phosphorylated S CD3EAP 55456.1 1 10 1198.1 167.21 HUMAN 1 11.2647 4.063 MPGPREESEEEEDED-p P35659;S32-p MPGPREESEEEEDED 0.243314382718007 0.0263581786161247 -0.312666666666667 0.537 11.7402663722055 21.4552078031466 -0.312666666666667 0.537 0.0669843523661092 0.00715285167975092 -2.2863480381622 4.19415440774284 P35659 DEK P35659.S32.p_DEK P35659_S32s _1_1_32_32 P35659 P35659|B4DFG0 Protein DEK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12976.12976.4 22.26 19.77 99 1 1 1 0 1076.7125 4223.8549 S32s TMT10 22 (K) EPEMPGPREEsEEEEDEDDEEEEEEEKEK (S) EPEMPGPREES(1.0)EEEEDEDDEEEEEEEKEK K:TMT10,s:Phosphorylated S DEK 42958.8 19 1 488.1 294.94 HUMAN 1 -11.7403 21.4552 MPIHDHDSGVEDEDF-p Q15468-2;S395-p MPIHDHDSGVEDEDF 0.874041515701776 0.00657538228744706 -0.033 -0.675333333333333 1.14359756731183 31.3701603032607 -0.033 -0.675333333333333 0.768493579144645 0.000729430585606831 -0.30952038166898 -6.84856161089218 Q15468 STIL Q15468.2.S395.p_STIL Q15468-2_S395s _1_1_395_395 Q15468-2 Q15468-2|E9PSF2 Isoform 2 of SCL-interrupting locus protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14387.14387.5 20.71 20.71 1.264 4 1 1 0 758.5684 3708.8481 S395s TMT10 388 (K) MPIHDHDsGVEDEDFSPRPIPSPHPVSQK (I) MPIHDHDS(0.99)GVEDEDFS(0.0)PRPIPS(0.0)PHPVS(0.0)QK K:TMT10,s:Phosphorylated S STIL 145036 1 1 2451.1 82.93 HUMAN 1 -1.1436 -31.3702 MPKDVRQSLSPMSQR-p Q9NSV4;S1091-p MPKDVRQSLSPMSQR 0.109204251400589 0.00160137763209639 -0.357333333333333 -0.856666666666667 20.1512617929869 44.7037822710584 -0.357333333333333 -0.856666666666667 0.00965770244716263 3.38549185194959e-05 -3.91148823484029 -12.4637790548556 Q9NSV4 DIAPH3 Q9NSV4.S1091.p_DIAPH3 Q9NSV4_S1091sS1093s_2_2_1091_1093 Q9NSV4 Q9NSV4|Q9NSV4-4|Q9NSV4-5|Q9NSV4-6|Q9NSV4-7|Q9NSV4-1 Protein diaphanous homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15375.15401.4 10.36 10.36 10.356 3 2 2 0 615.5714 2299.332 S1091s S1093s TMT10 1087 (K) DVRQsLsPMSQRPVLK (V) DVRQS(0.99)LS(0.99)PMS(0.0)QRPVLK K:TMT10,s:Phosphorylated S DIAPH3 138235.7 3 3 3853.1 41.68 HUMAN 1 -20.1513 -44.7038 MPKFAFSSEDEGVGP-p O60307;S793-p MPKFAFSSEDEGVGP 0.123350251698765 0.0703462000072235 -0.289666666666667 -0.219666666666667 18.9202150456359 15.3284410129702 -0.289666666666667 -0.219666666666667 0.0128226708823464 0.0293194553694429 -3.65095303054758 -2.93831146281428 O60307 MAST3 O60307.S793.p_MAST3 O60307_S792sS793s_2_2_792_793 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24796.24796.3 13.42 13.42 99 2 2 2 0 789.6951 2207.1385 S792s S793s TMT10 789 (K) FAFssEDEGVGPGPAGPK (R) FAFS(1.0)S(1.0)EDEGVGPGPAGPK K:TMT10,s:Phosphorylated S MAST3 143933.5 1 35 121.3 549.41 HUMAN 1 -18.9202 -15.3284 MPKFKMPSFGVSAPG-p Q8IVF2;S842-p MPKFKMPSFGVSAPG 0.674901867665647 0.0108844597865823 -0.064 -0.570666666666667 3.19850374587263 27.5075355476611 -0.064 -0.570666666666667 0.478795020881808 0.00177519655015256 -0.760450164174957 -5.700137582043 Q8IVF2 AHNAK2 Q8IVF2.S842.p_AHNAK2 Q8IVF2_S842s _1_1_842_842 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22140.22140.3 8.6 8.6 2.257 2 1 1 0 539.2832 1535.8656 S842s TMT10 840 (K) MPsFGVSAPGK (S) MPS(0.99)FGVS(0.0)APGK K:TMT10,s:Phosphorylated S AHNAK2 617759.6 3 10 237.1 418.35 HUMAN 1 -3.1985 -27.5075 MPKFSMPSLKGEGPE-p Q09666;S1138-p MPKFSMPSLKGEGPE 0.613150431981527 0.151466281298473 -0.119 0.184333333333333 3.94016397591007 10.7781071080904 -0.119 0.184333333333333 0.40363015287732 0.0835967298922282 -0.905674503376925 2.11634736807911 Q09666 AHNAK Q09666.S1138.p_AHNAK Q09666_S1138s _1_1_1138_1138 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27472.27472.4 17.38 13.39 2.174 2 1 1 0 703.6284 2731.5308 S1138s TMT10 1134 (K) FSMPsLKGEGPEVDVNLPK (A) FS(0.0)MPS(0.99)LKGEGPEVDVNLPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 49 1.1 4313.36 HUMAN 1 -3.9402 10.7781 MPKLATQSNEITIPV-p P04792;S176-p MPKLATQSNEITIPV 0.431193631119531 0.0852731738418399 -0.124333333333333 -0.189 6.72544948078189 14.1513443857061 -0.124333333333333 -0.189 0.212547035450652 0.0384472747680925 -1.41286372447853 -2.71909556235312 P04792 HSPB1 P04792.S176.p_HSPB1 P04792_S176s _1_1_176_176 P04792 P04792|C9J3N8 Heat shock protein beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27079.27079.3 19 19 2.291 5 1 1 0 739.0451 2135.1546 S176s TMT10 172 (K) LATQsNEITIPVTFESR (A) LAT(0.0)QS(0.99)NEIT(0.0)IPVT(0.0)FES(0.0)R s:Phosphorylated S HSPB1 22839.1 2 13 357.1 346.69 HUMAN 1 -6.7254 -14.1513 MPKPHSVSLNDTETR-p Q9P0L0-2;S211-p MPKPHSVSLNDTETR 0.179420120091279 0.849461732741966 -0.475 0.0226666666666667 14.730679039743 0.995638033913137 -0.475 0.0226666666666667 0.0336458958330185 0.79512644274969 -2.82809076679274 0.272757066713245 Q9P0L0 VAPA Q9P0L0.2.S211.p_VAPA Q9P0L0-2_S211s_1_1_211_211 Q9P0L0-2 Q9P0L0-2 Isoform 2 of Vesicle-associated membrane protein-associated protein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10646.10646.4 7.43 7.43 7.429 4 1 1 0 752.1433 2924.5867 S211s N213n TMT10 200 (K) QDGPMPKPHSVsLnDTETRK (L) QDGPMPKPHS(0.0)VS(0.99)LN(1.0)DT(0.0)ET(0.0)RK K:TMT10,s:Phosphorylated S,n:Deamidated VAPA 32841.2 1 7 1813.1 113.12 HUMAN 1 -14.7307 0.9956 MPKSEIPSPQSQLLE-p Q9ULJ8-3;S338-p MPKSEIPSPQSQLLE 0.591638913799597 0.136927901607006 0.148333333333333 0.269333333333333 4.19973391305761 11.3788283587823 0.148333333333333 0.269333333333333 0.380212690775673 0.0727976171721465 0.95512151543338 2.22157336315467 Q9ULJ8 PPP1R9A Q9ULJ8.3.S338.p_PPP1R9A Q9ULJ8-3_S338s _1_1_338_338 Q9ULJ8-3 Q9ULJ8-3|Q9ULJ8-5|Q9ULJ8-4 Isoform 3 of Neurabin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31620.31620.2 14.39 11.52 2.308 3 1 1 0 1281.6449 2482.2987 S338s TMT10 334 (K) SEIPsPQSQLLEDAEANLVGR (E) S(0.0)EIPS(0.99)PQS(0.0)QLLEDAEANLVGR s:Phosphorylated S PPP1R9A 154561.1 3 3 1935.1 106.21 HUMAN 1 4.1997 11.3788 MPKVDLKSPQVDIKG-p Q8IVF2;S3408-p MPKVDLKSPQVDIKG 0.174176357894748 0.00630838540915913 -0.217333333333333 -0.550333333333333 15.1182072047496 31.6768542840545 -0.217333333333333 -0.550333333333333 0.0307736690920898 0.000679695776949228 -2.9006505758417 -6.94715475982001 Q8IVF2 AHNAK2 Q8IVF2.S3408.p_AHNAK2 Q8IVF2_S3408s _1_1_3408_3408 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18183.18183.4 12.03 12.03 99 1 1 1 0 630.881 2440.5309 S3408s TMT10 3404 (K) VDLKsPQVDIKGPK (L) VDLKS(1.0)PQVDIKGPK K:TMT10,s:Phosphorylated S AHNAK2 617759.6 2 15 237.1 418.35 HUMAN 1 -15.1182 -31.6769 MPKWINATDPSARTL-p P08243;T545-p MPKWINATDPSARTL 0.314956511899696 0.349625324393531 0.146 0.0996666666666667 9.38823456183255 6.05128332111813 0.146 0.0996666666666667 0.115126829263973 0.248239945876984 1.87559191098324 1.293383992753 P08243 ASNS P08243.T545.p_ASNS P08243_T545t _1_1_545_545 P08243 P08243|P08243-2|P08243-3 Asparagine synthetase [glutamine-hydrolyzing] HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15048.15048.2 9.33 4.24 7.699 2 1 1 0 720.3484 1359.7218 T545t TMT10 541 (K) WINAtDPSAR (T) WINAT(0.99)DPS(0.0)AR t:Phosphorylated T ASNS 64939.3 1 1 6814.1 9.33 HUMAN 1 9.3882 6.0513 MPLLTPATPGGLPPA-p Q9UHX1;T314-p MPLLTPATPGGLPPA 0.82642168732256 0.35158293067447 0.0433333333333333 -0.0963333333333333 1.59701287990446 6.01755982668664 0.0433333333333333 -0.0963333333333333 0.692306982738756 0.250175062717071 0.41758517423222 -1.2873840384271 Q9UHX1 PUF60 Q9UHX1.T314.p_PUF60 Q9UHX1_T314t_1_1_314_314 Q9UHX1 Q9UHX1|Q9UHX1-2|Q9UHX1-5|Q9UHX1-3|Q9UHX1-6|Q9UHX1-4 Poly(U)-binding-splicing factor PUF60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.34943.34943.4 20.67 20.67 5.103 4 1 1 0 837.9662 3252.8794 M307m T314t TMT10 302 (K) AVTPPmPLLTPAtPGGLPPAAAVAAAAATAK (I) AVT(0.0)PPM(1.0)PLLT(0.0)PAT(0.99)PGGLPPAAAVAAAAAT(0.0)AK K:TMT10,m:Oxidized methionine,t:Phosphorylated T PUF60 60045.6 5 6 1450.1 140.84 HUMAN 1 1.597 -6.0176 MPMPTEGTPPPLSGT-p Q99640;T17-p MPMPTEGTPPPLSGT 0.697352295056568 0.0154604915090575 0.0536666666666667 -0.377 2.94001932216242 25.0395637627072 0.0536666666666667 -0.377 0.508157181717319 0.00313360047036686 0.708202993493213 -5.0474911412144 Q99640 PKMYT1 Q99640.T17.p_PKMYT1 Q99640_T17t _1_1_17_17 Q99640 B4DZM6|Q99640|Q99640-2 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.35660.35660.3 24.42 24.42 3.207 5 1 1 0 1280.9914 3760.983 T17t TMT10 1 (-) MLERPPALAMPMPTEGtPPPLSGTPIPVPAYFR (H) MLERPPALAMPMPT(0.0)EGT(0.99)PPPLS(0.0)GT(0.0)PIPVPAY(0.0)FR t:Phosphorylated T PKMYT1 55090.9 20 1 926.1 199.78 HUMAN 1 2.94 -25.0396 MPNAIVQSVGVSSGK-p O95831;S371-p MPNAIVQSVGVSSGK 0.881910569851389 0.0766010107693251 0.0316666666666667 0.204666666666667 1.0733252256148 14.8055495346437 0.0316666666666667 0.204666666666667 0.781029571327693 0.0330708263232335 0.292171487478617 2.84023679051455 O95831 AIFM1 O95831.S371.p_AIFM1 O95831_S371s _1_1_371_371 O95831 O95831|O95831-3|O95831-2|E9PMA0|O95831-5 Apoptosis-inducing factor 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22280.22280.3 13.04 11.26 3.616 3 1 1 0 704.3823 2031.1673 S371s TMT10 363 (K) VMPNAIVQsVGVSSGK (L) VMPNAIVQS(0.99)VGVS(0.0)S(0.0)GK K:TMT10,s:Phosphorylated S AIFM1 67184.7 1 8 1056.1 182.66 HUMAN 1 1.0733 14.8055 MPNIGYGSNKKTKHM-p F8W727;S80-p MPNIGYGSNKKTKHM 0.187863102695022 0.0636572531748867 -0.321333333333333 -0.229666666666667 14.2520128293405 15.9267563587173 -0.321333333333333 -0.229666666666667 0.0375663254879219 0.0255460856617185 -2.73930695168298 -3.05199503154621 F8W727 NotFound F8W727.S80.p_NotFound F8W727_S80s _1_1_80_80 F8W727 F8W727|P62910 60S ribosomal protein L32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22259.22259.4 17.13 17 6.035 2 1 1 0 723.6652 2811.6725 S80s TMT10 67 (R) FKGQILMPNIGYGsNKK (T) FKGQILMPNIGY(0.0)GS(0.99)NKK K:TMT10,s:Phosphorylated S RPL32 18133 3 1 3198.1 57.8 HUMAN 1 -14.252 -15.9268 MPPGRSRSLLLLVCQ-p Q8TE68;S118-p MPPGRSRSLLLLVCQ 0.422807784151987 0.78008302167641 0.186666666666667 -0.0423333333333333 6.88615303866617 1.49262703865267 0.186666666666667 -0.0423333333333333 0.204825817143475 0.709148675579487 1.44106981883499 -0.393217586380058 Q8TE68 EPS8L1 Q8TE68.S118.p_EPS8L1 Q8TE68_S118s _1_1_118_118 Q8TE68 Q8TE68|B4DKV7|Q8TE68-3|K7EN83|K7EKX9 Epidermal growth factor receptor kinase substrate 8-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23338.23338.2 12 8.19 99 1 1 1 0 768.8784 1456.7828 S118s Hydrogen 118 (R) sLLLLVCQEPER (A) S(1.0)LLLLVCQEPER C:Carbamidomethylation,s:Phosphorylated S EPS8L1 80534.9 2 2 326.1 361.27 HUMAN 1 6.8862 -1.4926 MPPLIADSPKARCPL-p P54646;S377-p MPPLIADSPKARCPL 0.171396449036957 0.00471188329012025 -0.263666666666667 -0.591333333333333 15.2476977826102 34.0305954451094 -0.263666666666667 -0.591333333333333 0.0298696560513935 0.000395312416528327 -2.92503749395629 -7.74407105971815 P54646 PRKAA2 P54646.S377.p_PRKAA2 P54646_S377s _1_1_377_377 P54646 P54646|A0A087WXX9 5'-AMP-activated protein kinase catalytic subunit alpha-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23152.23152.2 14.04 11.1 99 1 1 1 0 803.9379 1526.9017 S377s TMT10 370 (R) MPPLIADsPK (A) MPPLIADS(1.0)PK K:TMT10,s:Phosphorylated S PRKAA2 62889.1 7 2 1453.2 140.73 HUMAN 1 -15.2477 -34.0306 MPPSRSKTPPPPPQT-p P25054;T1438-p MPPSRSKTPPPPPQT 0.943516785226183 0.226498683465886 -0.0106666666666667 -0.237333333333333 0.497466631785985 8.49318257813273 -0.0106666666666667 -0.237333333333333 0.891770982840693 0.141475664411315 -0.142592682178672 -1.72004507344357 P25054 APC P25054.T1438.p_APC P25054_T1438t _1_1_1438_1438 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5109.5109.4 16.15 10.57 1.682 4 1 1 0 543.8048 2092.2279 T1438t Hydrogen 1436 (R) SKtPPPPPQTAQTKR (E) S(0.0)KT(0.99)PPPPPQT(0.0)AQT(0.0)KR K:TMT10-Lys-Only,t:Phosphorylated T APC 313808.5 7 20 33.1 890.71 HUMAN 1 -0.4975 -8.4932 MPQDSVPSPRSLQGK-p P53396;S481-p MPQDSVPSPRSLQGK 0.969258258003316 0.916271147853457 -0.00633333333333333 0.011 0.265101341847842 0.534109373467241 -0.00633333333333332 0.011 0.940783876755382 0.884278493433837 -0.0777988519162391 0.152537852511177 P53396 ACLY P53396.S481.p_ACLY P53396_S481s _1_1_481_481 P53396 P53396 ATP-citrate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11257.11879.3 19.67 19.67 3.337 2 1 1 0 673.6889 1939.0835 S481s TMT10 470 (K) AKPAMPQDSVPsPR (S) AKPAMPQDS(0.0)VPS(0.99)PR K:TMT10,s:Phosphorylated S ACLY 121749.9 32 4 1256.1 161.58 HUMAN 1 -0.2651 0.5341 MPQELPQSPRTRQPE-p Q8N5J2-3;S151-p MPQELPQSPRTRQPE 0.469925435192552 0.0119931109443912 -0.122666666666667 -0.418 6.05744472705691 26.838604113696 -0.122666666666667 -0.418 0.247888013562582 0.00207080682959254 -1.2947904357395 -5.51746797584352 Q8N5J2 FAM63A Q8N5J2.3.S151.p_FAM63A Q8N5J2-3_S151s _1_1_151_151 Q8N5J2-3 Q8N5J2-3 Isoform 3 of Ubiquitin carboxyl-terminal hydrolase MINDY-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12224.12224.2 16.53 14.76 5.778 2 1 1 0 905.4148 1729.8563 S151s TMT10 141 (R) ACSMPQELPQsPR (T) ACS(0.0)MPQELPQS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S MINDY1 57731.8 6 2 4449.1 31.23 HUMAN 1 -6.0574 -26.8386 MPRKRAGSFTGTSDP-p J3KQR7;S1180-p MPRKRAGSFTGTSDP 0.538659416854896 0.972900041531255 0.106333333333333 -0.0073333333333333 4.96698243933732 0.167965618830587 0.106333333333333 -0.00733333333333335 0.318641073152846 0.962062835381165 1.09800396191753 -0.0498026446824046 J3KQR7 NotFound J3KQR7.S1180.p_NotFound J3KQR7_S1180s _1_1_1180_1180 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7174.7174.2 10.85 10.85 1.132 4 1 1 0 807.8427 1534.7132 S1180s Hydrogen 1178 (R) AGsFTGTSDPEAAPAR (T) AGS(0.99)FT(0.0)GT(0.0)S(0.0)DPEAAPAR s:Phosphorylated S CEP170B 172326.6 2 27 51.1 746.11 HUMAN 1 4.967 -0.168 MPRSEFGSVDGPLPH-p Q5JRA6;S1706-p MPRSEFGSVDGPLPH 0.844877509546892 0.91142024325533 -0.0413333333333333 -0.016 1.41395726620736 0.564049037148036 -0.0413333333333334 -0.016 0.722111519894023 0.878203363854105 -0.3747177224671 -0.160625524402691 Q5JRA6 MIA3 Q5JRA6.S1706.p_MIA3 Q5JRA6_S1706s _1_1_1706_1706 Q5JRA6 Q5JRA6|Q5JRA6-2|Q5JRA6-4 Transport and Golgi organization protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15610.15610.3 15.05 15.05 3.524 2 1 1 0 601.9595 1723.8965 S1706s TMT10 1702 (R) SEFGsVDGPLPHPR (W) S(0.0)EFGS(0.99)VDGPLPHPR s:Phosphorylated S MIA3 214383.2 1 9 378.1 336.1 HUMAN 1 -1.414 -0.564 MPSARPPSPPLSSWE-p O43896;S915-p MPSARPPSPPLSSWE 0.645352058762717 0.540002283411953 -0.158333333333333 -0.104333333333333 3.55778786383926 3.59979073691781 -0.158333333333333 -0.104333333333333 0.440779323091346 0.436536866090024 -0.831596623472012 -0.839679974254195 O43896 KIF1C O43896.S915.p_KIF1C O43896_S915s _1_1_915_915 O43896 O43896 Kinesin-like protein KIF1C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18627.18839.3 14.93 8.95 2.452 4 1 1 0 702.013 2024.0585 S915s TMT10 908 (R) MPSARPPsPPLSSWER (V) MPS(0.0)ARPPS(0.99)PPLS(0.0)S(0.0)WER s:Phosphorylated S KIF1C 123800.2 4 6 954.1 195.97 HUMAN 1 -3.5578 -3.5998 MPSFGMLSPGKSIEV-p Q8IVF2;S4477-p MPSFGMLSPGKSIEV 0.148299935849049 0.0179846930585243 -0.286 -0.644 16.7390953940231 24.0336328133858 -0.286 -0.644 0.0211880242147531 0.00395036039630827 -3.21142253350165 -4.7974279087913 Q8IVF2 AHNAK2 Q8IVF2.S4477.p_AHNAK2 Q8IVF2_S4477s _1_1_4477_4477 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28083.28083.4 14.67 14.67 12.05 2 1 1 0 549.2994 2114.2109 S4477s TMT10 4468 (K) FKMPSFGMLsPGK (S) FKMPS(0.0)FGMLS(0.99)PGK K:TMT10,s:Phosphorylated S AHNAK2 617759.6 4 20 237.1 418.35 HUMAN 1 -16.7391 -24.0336 MPSVVNYSGLRKRLE-p Q27J81;S51-p MPSVVNYSGLRKRLE 0.590863718677233 0.284452539975315 0.075 -0.169333333333333 4.21049264863897 7.19980937274892 0.075 -0.169333333333333 0.379271959234146 0.190554435722779 0.95715763187953 -1.49552038610892 Q27J81 INF2 Q27J81.S51.p_INF2 Q27J81_S51s _1_1_51_51 Q27J81 Q27J81|Q27J81-2|Q27J81-3 Inverted formin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29841.29841.3 12.16 8.49 1.73 3 1 1 0 629.3348 1806.0145 S51s TMT10 41 (R) LLQMPSVVNYsGLR (K) LLQMPS(0.0)VVNY(0.0)S(0.99)GLR s:Phosphorylated S INF2 136934.1 1 2 356.1 347.64 HUMAN 1 4.2105 -7.1998 MPVAHMESPERYLHL-p Q9UPS8-3;S489-p MPVAHMESPERYLHL 0.546890359308701 0.428364362401158 -0.0886666666666667 -0.0826666666666666 4.83743719856838 4.90189327492915 -0.0886666666666667 -0.0826666666666666 0.32828896152577 0.323452619393508 -1.07418167720698 -1.0858326719559 Q9UPS8 ANKRD26 Q9UPS8.3.S489.p_ANKRD26 Q9UPS8-3_S489s _1_1_489_489 Q9UPS8-3 Q9UPS8-3 Isoform 3 of Ankyrin repeat domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23420.23420.5 11.07 11.07 5.372 3 1 1 0 735.7906 3594.9566 S489s TMT10 479 (R) NVGMPVAHMEsPERYLHLKPTIEMK (D) NVGMPVAHMES(0.99)PERY(0.0)LHLKPT(0.0)IEMK K:TMT10,s:Phosphorylated S ANKRD26 197605.3 1 19 812.2 221.02 HUMAN 1 -4.8374 -4.9019 MPVRNTGSPKSAVKT-p Q9BTC8;S457-p MPVRNTGSPKSAVKT 0.841126999062338 0.983719515683147 0.0963333333333333 -0.0116666666666666 1.45150090234753 0.104124470933478 0.0963333333333334 -0.0116666666666667 0.7158959570082 0.976309584669012 0.383589260930379 -0.0310907000864471 Q9BTC8 MTA3 Q9BTC8.S457.p_MTA3 Q9BTC8_S457s _1_1_457_457 Q9BTC8 Q9BTC8|E7EV10|D6W5A2|Q9BTC8-2|E7EQY4 Metastasis-associated protein MTA3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10413.10413.3 15.25 9.27 2.073 2 1 1 0 714.0322 2060.1145 S457s TMT10 445 (R) QAMQGMPVRNTGsPK (S) QAMQGMPVRNT(0.0)GS(0.99)PK K:TMT10,s:Phosphorylated S MTA3 68244.2 4 5 1441.1 142.09 HUMAN 1 1.4515 -0.1041 MPYKRRRSTPAPKEE-p O95071;S636-p MPYKRRRSTPAPKEE 0.232670986778867 0.00297589273654222 -0.296666666666667 0.645666666666667 12.1701635389508 38.0434180914206 -0.296666666666667 0.645666666666667 0.0606713482612846 0.000156912734495776 -2.36255368815888 9.28520733868687 O95071 UBR5 O95071.S636.p_UBR5 O95071_S636s _1_1_636_636 O95071 O95071|O95071-2|E7EMW7 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5540.5540.2 10.13 10.13 1.282 2 1 1 0 827.4293 1573.8838 S636s Hydrogen 636 (R) sTPAPKEEEK (V) S(0.99)T(0.0)PAPKEEEK K:TMT10-Lys-Only,s:Phosphorylated S UBR5 312542 14 9 80.1 636.57 HUMAN 1 -12.1702 38.0434 MQARNGISPTNPTKL-p Q5VWQ8;S1168-p MQARNGISPTNPTKL 0.55827821703547 0.0271669948321718 -0.0776666666666667 -0.317666666666667 4.67302201760939 21.2470107595176 -0.0776666666666667 -0.317666666666667 0.340955576732039 0.00750410537733547 -1.04378186950483 -4.14763735957732 Q5VWQ8 DAB2IP Q5VWQ8.S1168.p_DAB2IP Q5VWQ8_S1168s _1_1_1168_1168 Q5VWQ8 Q9UJF2-2|Q5VWQ8|Q5VWQ8-2 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10069.10069.2 10.92 10.92 1.389 3 1 1 0 783.919 1486.863 S1168s TMT10 1165 (R) NGIsPTNPTK (L) NGIS(0.99)PT(0.0)NPT(0.0)K K:TMT10,s:Phosphorylated S DAB2IP 132592.9 4 24 281.1 388.28 HUMAN 1 -4.673 -21.247 MQDEGQESLEEELDV-p O60716;S943-p MQDEGQESLEEELDV 0.542188927593753 0.00564565212167102 -0.103666666666667 0.5 4.90544640370529 32.5850849388811 -0.103666666666667 0.5 0.323188098692598 0.000551431417435678 -1.08670183872803 7.24605582963402 O60716 CTNND1 O60716.S943.p_CTNND1 O60716_S943s_1_1_943_943 O60716 O60716|O60716-2|O60716-4|O60716-6|O60716-9|O60716-10|O60716-12|O60716-14|O60716-17|O60716-18|O60716-20|O60716-22|O60716-25|O60716-26|O60716-28|O60716-30 Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36736.36736.5 29.93 24.15 1.743 6 1 1 0 947.6536 4638.2731 M936m S943s TMT10 931 (K) GTTPLmQDEGQEsLEEELDVLVLDDEGGQVSYPSMQKI (-) GT(0.0)T(0.0)PLM(0.99)QDEGQES(0.99)LEEELDVLVLDDEGGQVS(0.0)Y(0.0)PS(0.0)M(0.0)QKI K:TMT10,m:Oxidized methionine,s:Phosphorylated S CTNND1 108738.6 43 2 21.2 1014.17 HUMAN 1 -4.9054 32.5851 MQDLDNNSITVKQRC-p E7ETA6;S1689-p MQDLDNNSITVKQRC 0.656769255604447 0.0210192264107334 0.072 -0.32 3.4266769586091 22.9424193765941 0.072 -0.32 0.454289086880522 0.00507876434894161 0.805819284905371 -4.53576501011758 E7ETA6 PCM1 E7ETA6.S1689.p_PCM1 E7ETA6_S1689s _1_1_1689_1689 E7ETA6 Q15154|E7ETA6|Q15154-2 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23783.23783.3 13.54 11.51 3.112 2 1 1 0 677.0196 1949.0778 S1689s TMT10 1681 (K) LMQDLDNNsITVK (Q) LMQDLDNNS(0.99)IT(0.0)VK K:TMT10,s:Phosphorylated S PCM1 229381.8 1 48 13.1 1159.95 HUMAN 1 3.4267 -22.9424 MQDNSGTYGKIWEGS-p Q05655;Y334-p MQDNSGTYGKIWEGS 0.542372586497903 0.0148369648359156 -0.361333333333333 -1.05166666666667 4.90292450159157 25.3144298515201 -0.361333333333333 -1.05166666666667 0.323375825102695 0.00294141982252229 -1.08623812000181 -5.11736346512776 Q05655 PRKCD Q05655.Y334.p_PRKCD Q05655_Y334y _1_1_334_334 Q05655 Q05655 Protein kinase C delta type GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11589.11589.3 14.17 13.42 1.174 4 1 1 0 875.7667 2545.3171 Y334y TMT10 319 (K) KTGVAGEDMQDNSGTyGK (I) KT(0.0)GVAGEDMQDNS(0.0)GT(0.0)Y(0.99)GK K:TMT10,y:Phosphorylated Y PRKCD 78701.8 2 3 10.1 97.65 HUMAN 1 -4.9029 -25.3144 MQDVLEKSDHLIAAA-p Q8N0Z3;S112-p MQDVLEKSDHLIAAA 0.885820345057877 0.0140130410445387 -0.021 -0.434333333333333 1.03570662376212 25.7147447077298 -0.021 -0.434333333333333 0.787824237186633 0.00268241228379897 -0.282811230945664 -5.22034751547568 Q8N0Z3 SPICE1 Q8N0Z3.S112.p_SPICE1 Q8N0Z3_S112s _1_1_112_112 Q8N0Z3 Q8N0Z3 Spindle and centriole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25046.25046.4 17.72 17.72 6.899 3 1 1 0 878.9614 3432.8652 S112s TMT10 97 (K) EILSDQYQMQDVLEKsDHLIAAAK (E) EILS(0.0)DQY(0.0)QMQDVLEKS(0.99)DHLIAAAK K:TMT10,s:Phosphorylated S SPICE1 96605.1 1 2 556.1 273.19 HUMAN 1 -1.0357 -25.7147 MQEKKVVSLNGELGD-p O00592;S529-p MQEKKVVSLNGELGD 0.293942250620987 0.265623415787645 0.175666666666667 -0.196333333333333 10.0338448379143 7.58087210193662 0.175666666666667 -0.196333333333333 0.099223722525378 0.174547161150564 1.98759108630402 -1.56188855847861 O00592 PODXL O00592.S529.p_PODXL O00592_S529s _1_1_529_529 O00592 O00592|O00592-2 Podocalyxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34458.34458.4 14.89 14.89 2.482 4 1 1 0 1119.8187 4396.3015 S529s TMT10 526 (K) KVVsLNGELGDSWIVPLDNLTKDDLDEEEDTHL (-) KVVS(0.99)LNGELGDS(0.0)WIVPLDNLT(0.0)KDDLDEEEDT(0.0)HL K:TMT10,s:Phosphorylated S PODXL 59090.7 1 2 4584.1 29.26 HUMAN 1 10.0338 -7.5809 MQELEDYSEGGPLYK-p P49792;S757-p MQELEDYSEGGPLYK 0.995103621521408 0.547578576096946 0.000999999999999994 -0.0883333333333333 0.0429945544380722 3.51742695026407 0.000999999999999993 -0.0883333333333333 0.990148980310732 0.444894774694772 0.0129273672880787 -0.823555581052605 P49792 RANBP2 P49792.S757.p_RANBP2 P49792_S757s _1_1_757_757 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.35872.35872.3 19.92 19.92 1.302 4 1 1 0 990.8005 2890.4255 S757s TMT10 744 (K) EMLNSVMQELEDYsEGGPLYK (N) EMLNS(0.0)VMQELEDY(0.0)S(0.99)EGGPLY(0.0)K K:TMT10,s:Phosphorylated S RANBP2 362585.9 1 8 9.1 1298.62 HUMAN 1 0.043 -3.5174 MQEPGRYSPPPRHMS-p P35548;S123-p MQEPGRYSPPPRHMS 0.0745793811074775 0.333944165481148 0.531333333333333 0.120666666666667 24.1589668777686 6.31319651617697 0.531333333333333 0.120666666666667 0.00383798534619066 0.233711642922127 4.83387439894189 1.33983645168963 P35548 MSX2 P35548.S123.p_MSX2 P35548_S123s _1_1_123_123 P35548 P35548 Homeobox protein MSX-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14451.14451.4 15.49 15.49 4.596 4 1 1 0 693.3066 2690.2466 S123s TMT10 106 (K) SENSEDGAAWMQEPGRYsPPPR (H) S(0.0)ENS(0.0)EDGAAWMQEPGRY(0.0)S(0.99)PPPR s:Phosphorylated S MSX2 28953.6 2 5 1549.2 132.58 HUMAN 1 24.159 6.3132 MQEPGRYSPPPSECA-p D6RIS4;S123-p MQEPGRYSPPPSECA 0.193209904843605 0.0226871172620322 0.342333333333333 0.333 13.9353804445047 22.4507141844956 0.342333333333333 0.333 0.0404074975758972 0.00568759392344592 2.68106188057487 4.42096518744239 D6RIS4 NotFound D6RIS4.S123.p_NotFound D6RIS4_S123s _1_1_123_123 D6RIS4 D6RIS4 Homeobox protein MSX-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21279.21279.5 25.42 25.42 1.916 8 1 1 0 1161.9577 5725.7782 S123s TMT10 88 (R) EAHSPGPLVKPFETASVKSENSEDGAAWMQEPGRYsPPPSECAPGQE (-) EAHS(0.0)PGPLVKPFET(0.0)AS(0.0)VKS(0.0)ENS(0.0)EDGAAWMQEPGRY(0.0)S(0.99)PPPS(0.0)ECAPGQE K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MSX2 13668.9 4 4 1549.1 132.58 HUMAN 1 13.9354 22.4507 MQEPLKVTPRSREAF-p E9PGC8;T930-p MQEPLKVTPRSREAF 0.740641402649871 0.0591817126042763 0.068 -0.333333333333333 2.47427540564071 16.3579008486352 0.068 -0.333333333333333 0.565682129895073 0.0231318259094995 0.611448176278023 -3.13493934212762 E9PGC8 NotFound E9PGC8.T930.p_NotFound E9PGC8_T930t _1_1_930_930 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10305.10305.3 10.88 6.44 99 1 1 1 0 625.3412 1794.046 T930t TMT10 922 (K) HMQEPLKVtPR (S) HMQEPLKVT(1.0)PR K:TMT10,t:Phosphorylated T MAP1A 332906.7 1 13 20.1 1016.98 HUMAN 1 2.4743 -16.3579 MQHQRIHTGEKPYTC-p Q6DD87;T145-p MQHQRIHTGEKPYTC 0.658830919858434 0.0123700234922401 0.100333333333333 -0.736333333333333 3.40132450514115 26.6284694403397 0.100333333333333 -0.736333333333333 0.456948808763331 0.00217346702668599 0.800810892797627 -5.46099594821461 Q6DD87 ZNF787 Q6DD87.T145.p_ZNF787 Q6DD87_T145t _1_1_145_145 Q6DD87 Q6DD87|A0A087WUD1 Zinc finger protein 787 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7693.7693.3 13.93 13.93 3.797 3 1 1 0 777.0327 2249.1207 T145t TMT10 143 (R) IHtGEKPYTCPDCGR (S) IHT(0.99)GEKPY(0.0)T(0.0)CPDCGR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ZNF787 41569.7 2 3 3245.1 56.11 HUMAN 1 3.4013 -26.6285 MQKAQQVSQGLDVLT-p P18206-2;S357-p MQKAQQVSQGLDVLT 0.153998790819573 0.0541724584854114 -0.52 0.3 16.3249301960624 16.8791575966025 -0.52 0.3 0.0233081057798489 0.020515600824722 -3.13083152690946 3.23642735030157 P18206 VCL P18206.2.S357.p_VCL P18206-2_S357s _1_1_357_357 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23551.23551.3 12.56 9.73 6.909 2 1 1 0 666.0356 1916.1217 S357s TMT10 353 (K) AQQVsQGLDVLTAK (V) AQQVS(0.99)QGLDVLT(0.0)AK K:TMT10,s:Phosphorylated S VCL 117290.9 2 7 319.1 365.38 HUMAN 1 -16.3249 16.8792 MQLEEQASRQISSKK-p Q99661;S715-p MQLEEQASRQISSKK 0.302455726032692 0.72388043250674 0.260666666666667 0.0793333333333333 9.73065860931624 1.93158466630428 0.260666666666667 0.0793333333333334 0.10639816527465 0.640975652854714 1.93495232024635 0.493540508242436 Q99661 KIF2C Q99661.S715.p_KIF2C Q99661_S715s _1_1_715_715 Q99661 Q99661|Q99661-2 Kinesin-like protein KIF2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20801.20801.3 9.26 9.26 2.414 3 1 1 0 786.4166 2277.2637 S715s TMT10 706 (R) LAMQLEEQAsRQISSK (K) LAMQLEEQAS(0.99)RQIS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S KIF2C 82224.4 1 4 3246.1 56.11 HUMAN 1 9.7307 1.9316 MQNNSSPSISPNTSF-p Q9H0D6;S473-p MQNNSSPSISPNTSF 0.659595024833796 0.0715513637789286 -0.06 -0.218 3.3890612235258 15.224418789791 -0.06 -0.218 0.45824092995157 0.0300301928382577 -0.798385427176443 -2.91870840526456 Q9H0D6 XRN2 Q9H0D6.S473.p_XRN2 Q9H0D6_S473sS475s_2_2_473_475 Q9H0D6 Q9H0D6|Q9H0D6-2 5'-3' exoribonuclease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20964.20964.4 11.41 11.41 1.186 10 2 2 0 900.4233 3421.7422 M466m S473s S475s N477n TMT10 466 (R) mQNNSSPsIsPnTSFTSDGSPSPLGGIKR (K) M(1.0)QN(0.0)N(0.0)S(0.0)S(0.0)PS(0.99)IS(0.99)PN(0.99)T(0.0)S(0.0)FT(0.0)S(0.0)DGS(0.0)PS(0.0)PLGGIKR K:TMT10,m:Oxidized methionine,s:Phosphorylated S,n:Deamidated XRN2 109493.4 15 11 608.1 262.16 HUMAN 1 -3.3891 -15.2244 MQRTMKLYRLPETPK-p P30419;Y327-p MQRTMKLYRLPETPK 0.349971497199092 0.0829027332218913 -0.562 0.295666666666667 8.46951588931877 14.3176954750905 -0.562 0.295666666666667 0.142248734380856 0.0370024476176613 -1.71652788844916 2.74974168839338 P30419 NMT1 P30419.Y327.p_NMT1 P30419_Y327yT332t_2_2_327_332 P30419 P30419|P30419-2 Glycylpeptide N-tetradecanoyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.4061.4061.3 10.6 10.6 99 2 2 2 0 578.9726 1574.967 Y327y T332t TMT10 326 (K) LyRLPEtPK (T) LY(1.0)RLPET(1.0)PK K:TMT10,y:Phosphorylated Y,t:Phosphorylated T NMT1 57147.5 2 6 1576.1 130.17 HUMAN 1 -8.4695 14.3177 MQTKDASSDTELDKC-p Q8WW38;S434-p MQTKDASSDTELDKC 0.0702672710902986 0.374123725638737 -0.493 0.139333333333333 24.8832276884055 5.66622437479866 -0.493 0.139333333333333 0.00324845781380333 0.271254881521415 -5.01426260741672 1.22459151974253 Q8WW38 ZFPM2 Q8WW38.S434.p_ZFPM2 Q8WW38_S434s _1_1_434_434 Q8WW38 Q8WW38|Q8WW38-2|E7ET52 Zinc finger protein ZFPM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10431.10431.2 11.8 6.83 1.141 3 1 1 0 809.8846 1538.795 S434s TMT10 431 (K) DASsDTELDK (C) DAS(0.0)S(0.99)DT(0.0)ELDK K:TMT10,s:Phosphorylated S ZFPM2 130381.7 3 3 1154.1 171.84 HUMAN 1 -24.8832 5.6662 MQTRCVWSPLASPST-p Q5UIP0;S2172-p MQTRCVWSPLASPST 0.299833271733525 0.00263745224424543 0.146666666666667 -0.834666666666667 9.83165556822905 39.241213545267 0.146666666666667 -0.834666666666667 0.10395238147942 0.000119090918681855 1.95247758174791 -9.79525062781657 Q5UIP0 RIF1 Q5UIP0.S2172.p_RIF1 Q5UIP0_S2172s _1_1_2172_2172 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29457.29457.3 15.51 15.51 2.152 5 1 1 0 728.7241 2104.1877 S2172s TMT10 2169 (R) CVWsPLASPSTSILK (R) CVWS(0.99)PLAS(0.0)PS(0.0)T(0.0)S(0.0)ILK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RIF1 276628.8 5 28 29.1 922.06 HUMAN 1 9.8317 -39.2412 MRAAQAGSLEISKAT-p Q9BV73;S2322-p MRAAQAGSLEISKAT 0.996624147679768 0.0172097306414164 -0.000666666666666681 -0.429666666666667 0.0253612424811321 24.3399850541197 -0.000666666666666683 -0.429666666666667 0.994177375679389 0.00368130240529695 -0.00764079145318048 -4.87266072827613 Q9BV73 CEP250 Q9BV73.S2322.p_CEP250 Q9BV73_S2322s _1_1_2322_2322 Q9BV73 Q9BV73|Q9BV73-2 Centrosome-associated protein CEP250 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14444.14444.2 17.11 17.11 3.5 2 1 1 0 806.9384 1532.9048 S2322s TMT10 2317 (R) AAQAGsLEISK (A) AAQAGS(0.99)LEIS(0.0)K K:TMT10,s:Phosphorylated S CEP250 282045.1 2 7 1169.1 170.36 HUMAN 1 -0.0254 -24.34 MRASDPASPHIGRSN-p O95425-2;S50-p MRASDPASPHIGRSN 0.805134921082359 0.512238317572722 0.0466666666666667 -0.069 1.81522117899623 3.89707609986584 0.0466666666666667 -0.069 0.65838189878843 0.407654640099179 0.467481142452929 -0.897254671389628 O95425 SVIL O95425.2.S50.p_SVIL O95425-2_S50s _1_1_50_50 O95425-2 O95425|O95425-3|O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6163.6163.3 15.63 11.75 3.066 2 1 1 0 472.8995 1336.7171 S50s TMT10 45 (R) ASDPAsPHIGR (S) AS(0.0)DPAS(0.99)PHIGR s:Phosphorylated S SVIL 202384.1 2 1 406.2 324.74 HUMAN 1 1.8152 -3.8971 MRDAGDPSPPNKMLR-p Q9BTA9;S53-p MRDAGDPSPPNKMLR 0.290794992768058 0.131918212578143 0.203333333333333 0.176333333333333 10.1129922502199 11.5961254346786 0.203333333333333 0.176333333333333 0.0974318109923603 0.0692448464458829 2.00134809616157 2.25981326294258 Q9BTA9 WAC Q9BTA9.S53.p_WAC Q9BTA9_S53s _1_1_53_53 Q9BTA9 Q9BTA9|Q9BTA9-2|Q9BTA9-5|A0A0A0MRT2|Q9BTA9-3 WW domain-containing adapter protein with coiled-coil HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7297.7297.3 13.16 8.55 99 1 1 1 0 608.3022 1742.926 S53s TMT10 46 (K) MRDAGDPsPPNK (M) MRDAGDPS(1.0)PPNK K:TMT10,s:Phosphorylated S WAC 71065.3 6 1 918.1 200.44 HUMAN 1 10.113 11.5961 MRELPPLSPSLSRRA-p Q86UU1;S461-p MRELPPLSPSLSRRA 0.390953549200355 0.0531895765759122 0.126333333333333 -0.234333333333333 7.53675538889516 16.9946195377398 0.126333333333333 -0.234333333333333 0.176329290936362 0.0199773577176581 1.55468016221519 -3.25909273855491 Q86UU1 PHLDB1 Q86UU1.S461.p_PHLDB1 Q86UU1_S461s _1_1_461_461 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20508.20713.2 14.86 10.19 2.696 3 1 1 0 752.9019 1424.831 S461s TMT10 456 (R) ELPPLsPSLSR (R) ELPPLS(0.99)PS(0.0)LS(0.0)R s:Phosphorylated S PHLDB1 152129.1 9 9 99.1 600.41 HUMAN 1 7.5368 -16.9946 MRGGLGLSGAKANYR-p P22695;S247-p MRGGLGLSGAKANYR 0.683208662620214 0.0584042510352364 -0.062 0.246 3.10203795413819 16.4320102528339 -0.062 0.246 0.489549041497297 0.0227404458232 -0.741062239666821 3.14928639056698 P22695 UQCRC2 P22695.S247.p_UQCRC2 P22695_S247s _1_1_247_247 P22695 P22695|H3BRG4|H3BSJ9 Cytochrome b-c1 complex subunit 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15316.15316.2 8.89 8.89 99 1 1 1 0 649.3685 1217.7618 S247s TMT10 242 (R) GGLGLsGAK (A) GGLGLS(1.0)GAK K:TMT10,s:Phosphorylated S UQCRC2 48613.3 1 1 4767.1 26.91 HUMAN 1 -3.102 16.432 MRIAKQQSLETCEKT-p Q6P4F7;S787-p MRIAKQQSLETCEKT 0.185220024211789 0.00113377781599608 -0.210666666666667 -1.06833333333333 14.3980453892813 48.9323845140331 -0.210666666666667 -1.06833333333333 0.0363241500545174 1.27867904671413e-05 -2.76629788600988 -14.9831072729408 Q6P4F7 ARHGAP11A Q6P4F7.S787.p_ARHGAP11A Q6P4F7_S787s _1_1_787_787 Q6P4F7 Q6P4F7|Q6P4F7-3 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8561.8561.2 13.18 7.62 3.283 2 1 1 0 830.9046 1580.8354 S787s TMT10 785 (K) QQsLETCEK (T) QQS(0.99)LET(0.0)CEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARHGAP11A 114948.2 2 13 414.1 321.53 HUMAN 1 -14.398 -48.9324 MRISINQTPGKSLDF-p Q8WWI1-3;T714-p MRISINQTPGKSLDF 0.0444873405743474 0.350504853899476 -0.911 -0.325 30.0257508141248 6.03706383741591 -0.911 -0.325 0.000994088199795279 0.249054054495803 -6.43996213271573 -1.29085466498152 Q8WWI1 LMO7 Q8WWI1.3.T714.p_LMO7 Q8WWI1-3_T714t _1_1_714_714 Q8WWI1-3 E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14292.14292.2 12.25 8.43 3.866 2 1 1 0 748.4185 1415.8622 T714t TMT10 709 (R) ISINQtPGK (S) IS(0.0)INQT(0.99)PGK K:TMT10,t:Phosphorylated T LMO7 154694.3 2 20 61.1 704.74 HUMAN 1 -30.0258 -6.0371 MRIVRQPTPPPGDLE-p Q9BWN1;T194-p MRIVRQPTPPPGDLE 0.99539153278845 0.791205775473148 0.000999999999999992 0.0336666666666667 0.0374439700424968 1.41625511989956 0.000999999999999989 0.0336666666666667 0.991415268343223 0.721729551483455 0.0112655442460261 0.375222581419604 Q9BWN1 PRR14 Q9BWN1.T194.p_PRR14 Q9BWN1_T194t _1_1_194_194 Q9BWN1 Q9BWN1 Proline-rich protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.34608.34608.5 22.89 19.5 5.363 8 1 1 0 1079.5574 5313.7885 T194t TMT10 192 (R) QPtPPPGDLEPPFQPSALPADPLESPPTAPDPALELPSTPPPSSLLRPR (L) QPT(0.99)PPPGDLEPPFQPS(0.0)ALPADPLES(0.0)PPT(0.0)APDPALELPS(0.0)T(0.0)PPPS(0.0)S(0.0)LLRPR t:Phosphorylated T PRR14 64726.7 2 5 874.1 209.43 HUMAN 1 0.0374 1.4163 MRKAKENSEESGEFD-p Q9Y4D1;S1027-p MRKAKENSEESGEFD 0.804284889349789 0.967123073578635 -0.0356666666666667 -0.005 1.82371219273736 0.205422574840903 -0.0356666666666667 -0.005 0.657095935315153 0.953800932109805 -0.469397975089151 -0.0606629487258512 Q9Y4D1 DAAM1 Q9Y4D1.S1027.p_DAAM1 Q9Y4D1_S1027s _1_1_1027_1027 Q9Y4D1 Q9Y4D1|Q9Y4D1-2 Disheveled-associated activator of morphogenesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28849.28849.3 13.27 13.27 1.384 3 1 1 0 735.9974 2126.0087 S1027s TMT10 1025 (K) ENsEESGEFDDLVSALR (S) ENS(0.99)EES(0.0)GEFDDLVS(0.0)ALR s:Phosphorylated S DAAM1 124041.8 1 5 2038.1 101.28 HUMAN 1 -1.8237 -0.2054 MRKITLRSYVDLLKL-p Q9BXJ9;S537-p MRKITLRSYVDLLKL 0.231372003853837 0.0759248791912698 -0.544333333333333 0.216666666666667 12.2216120806086 14.8611629723891 -0.544333333333333 0.219266581635975 0.0599568477956609 0.0326500388790511 -2.37170516273605 2.85061344471885 Q9BXJ9 NAA15 Q9BXJ9.S537.p_NAA15 Q9BXJ9_S537s _1_1_537_537 Q9BXJ9 Q9BXJ9|A0A0B4J1W3 N-alpha-acetyltransferase 15, NatA auxiliary subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30447.30447.3 11.87 11.87 2.24 3 1 1 0 620.3646 1779.1144 S537s TMT10 533 (K) ITLRsYVDLLK (L) IT(0.0)LRS(0.99)Y(0.0)VDLLK K:TMT10,s:Phosphorylated S NAA15 102525.8 1 2 2350.1 87.07 HUMAN 1 -12.2216 14.8612 MRKKDEGSYDLGERK-p P34741;S178-p MRKKDEGSYDLGERK 0.436132073568337 0.334855250336672 -0.105666666666667 -0.125666666666667 6.63295484686824 6.29742862130148 -0.105666666666667 -0.125666666666667 0.217122342217526 0.234561720157595 -1.39659820485729 -1.3370468674246 P34741 SDC2 P34741.S178.p_SDC2 P34741_S178s _1_1_178_178 P34741 P34741|E9PBI9|E7ESK6 Syndecan-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10158.10158.5 14.62 7.52 3.066 5 1 1 0 717.3968 3502.9878 S178s TMT10 173 (R) KKDEGsYDLGERKPSSAAYQK (A) KKDEGS(0.99)Y(0.0)DLGERKPS(0.0)S(0.0)AAY(0.0)QK K:TMT10,s:Phosphorylated S SDC2 22216.6 5 1 3346.1 53.25 HUMAN 1 -6.633 -6.2974 MRKVPRVSLERLDLD-p Q13263;S489-p MRKVPRVSLERLDLD 0.766697935852592 0.2526684808951 -0.042 -0.196333333333333 2.21002717740595 7.86845415575641 -0.042 -0.196333333333333 0.601169975452612 0.163363332605863 -0.554827562258628 -1.61183029042483 Q13263 TRIM28 Q13263.S489.p_TRIM28 Q13263_S489s _1_1_489_489 Q13263 Q13263|Q13263-2 Transcription intermediary factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30815.30815.3 18.35 14.92 1.722 3 1 1 0 927.8348 2701.5177 S489s TMT10 488 (R) VsLERLDLDLTADSQPPVFK (V) VS(0.99)LERLDLDLT(0.0)ADS(0.0)QPPVFK K:TMT10,s:Phosphorylated S TRIM28 90316.8 10 13 118.1 555.36 HUMAN 1 -2.21 -7.8685 MRLEKDLSFKDTQLK-p Q8WVV4-1;S364-p MRLEKDLSFKDTQLK 0.307172848614777 0.909261012812205 -0.207666666666667 -0.016 9.58273991197235 0.577776237214817 -0.207666666666667 -0.016 0.110084458072952 0.875431916909167 -1.90930016976462 -0.164319164775536 Q8WVV4 POF1B Q8WVV4.1.S364.p_POF1B Q8WVV4-1_S364s _1_1_364_364 Q8WVV4-1 Q8WVV4-1 Isoform 1 of Protein POF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18998.18998.3 13.04 13.04 3.287 2 1 1 0 654.702 1882.1253 S364s TMT10 362 (K) DLsFKDTQLK (E) DLS(0.99)FKDT(0.0)QLK K:TMT10,s:Phosphorylated S POF1B 69550.4 1 4 2520.1 80.14 HUMAN 1 -9.5827 -0.5778 MRLERHLSAEDFSRV-p Q08495;S372-p MRLERHLSAEDFSRV 0.777365045744339 0.0144308661130214 0.062 0.511666666666667 2.10064796606578 25.5166168480612 0.062 0.511666666666667 0.616503012934478 0.00280761992086126 0.530977658329423 5.1691949317001 Q08495 DMTN Q08495.S372.p_DMTN Q08495_S372s _1_1_372_372 Q08495 Q08495|Q08495-2|Q08495-4|Q08495-3 Dematin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10328.10328.2 12.58 8.28 3.601 2 1 1 0 685.8188 1290.664 S372s TMT10 370 (R) HLsAEDFSR (V) HLS(0.99)AEDFS(0.0)R s:Phosphorylated S DMTN 45627.7 1 8 1283.1 158.63 HUMAN 1 2.1006 25.5166 MRLRRNHSNAQFIES-p P41229;S317-p MRLRRNHSNAQFIES 0.536318608089857 0.276896734297468 0.093 0.117 5.00529930265757 7.34841088703529 0.093 0.117 0.315842137204835 0.184144567567254 1.10502914481673 1.52143183409546 P41229 KDM5C P41229.S317.p_KDM5C P41229_S317s _1_1_317_317 P41229 P41229|P41229-5|P41229-2|P41229-3|P41229-4 Lysine-specific demethylase 5C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15705.15705.2 17.04 17.04 7.953 3 1 1 0 1017.4593 1953.9439 S317s TMT10 315 (R) NHsNAQFIESYVCR (M) NHS(0.99)NAQFIES(0.0)Y(0.0)VCR C:Carbamidomethylation,s:Phosphorylated S KDM5C 178398.7 2 3 1409.1 145.61 HUMAN 1 5.0053 7.3484 MRLSDLSTEDDDSGH-p Q5BJF6-4;T105-p MRLSDLSTEDDDSGH 0.260407038253762 0.103638878616272 0.168333333333333 0.238333333333333 11.0714002008901 13.0034336712932 0.168333333333333 0.238333333333333 0.0781375842018059 0.0500791135550183 2.16862278876829 2.51030792694646 Q5BJF6 ODF2 Q5BJF6.4.T105.p_ODF2 Q5BJF6-4_S101sS104sT105t_3_3_101_105 Q5BJF6-4 Q5BJF6-4|Q5BJF6-3|Q5BJF6-2|Q5BJF6-7|Q5BJF6-6|Q5BJF6-10 Isoform 4 of Outer dense fiber protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24813.24813.4 13.52 13.52 1.204 5 3 3 0 766.3325 2822.4065 S101s S104s T105t TMT10 94 (K) LVSVMRLsDLstEDDDSGHCK (M) LVS(0.0)VMRLS(0.99)DLS(0.99)T(0.99)EDDDS(0.0)GHCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T ODF2 96031.2 1 16 853.1 211.96 HUMAN 1 11.0714 13.0034 MRMDRGVSMPNMLEP-p O14639;S706-p MRMDRGVSMPNMLEP 0.785321801685938 0.0505624177869568 0.038 0.244666666666667 2.02294811977361 17.3168554797382 0.038 0.244666666666667 0.627632158843397 0.0185487416368565 0.513878089224588 3.32271400654181 O14639 ABLIM1 O14639.S706.p_ABLIM1 O14639_S706s_1_1_706_706 O14639 O14639|O14639-6|A0A0A0MRL6|O14639-2|F8W8M4|O14639-5|O14639-3|O14639-4|J3QSX6 Actin-binding LIM protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14830.14830.2 13.44 9.14 6.048 1 1 1 0 764.3606 1431.7537 S706s M707m Hydrogen 704 (R) GVsmPNMLEPK (I) GVS(1.0)M(0.99)PNM(0.0)LEPK K:TMT10-Lys-Only,s:Phosphorylated S,m:Oxidized methionine ABLIM1 89568.8 29 13 435.1 313.2 HUMAN 1 2.0229 17.3169 MRNGLVNSEVHNEDG-p Q9NUM4;S33-p MRNGLVNSEVHNEDG 0.0821409724815468 0.0901618401314303 0.398 0.334333333333333 23.1932548298759 13.8274385728913 0.398 0.334333333333334 0.00479374046006479 0.0414243919868072 4.60026190527175 2.65971854695085 Q9NUM4 TMEM106B Q9NUM4.S33.p_TMEM106B Q9NUM4_S33s _1_1_33_33 Q9NUM4 Q9NUM4|F2Z3N7 Transmembrane protein 106B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7185.7185.2 18.21 18.21 99 1 1 1 0 924.9253 1768.8776 S33s TMT10 28 (R) NGLVNsEVHNEDGR (N) NGLVNS(1.0)EVHNEDGR s:Phosphorylated S TMEM106B 31412.1 3 1 5557.1 18.21 HUMAN 1 23.1933 13.8274 MRNNMTASMFDLSMK-p Q6WKZ4;S156-p MRNNMTASMFDLSMK 0.749520863039578 0.596361987617437 -0.0796666666666667 0.0676666666666667 2.38284660493594 3.03870149437929 -0.0796666666666667 0.0676666666666667 0.577717255609749 0.496740820765034 -0.592010748156274 0.728159145490869 Q6WKZ4 RAB11FIP1 Q6WKZ4.S156.p_RAB11FIP1 Q6WKZ4_S156s _1_1_156_156 Q6WKZ4 Q6WKZ4|Q6WKZ4-3|Q7L804-2|E7EX40|Q6WKZ4-2 Rab11 family-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23609.23609.4 16.72 16.72 3.425 3 1 1 0 625.8116 2420.2591 S156s TMT10 151 (R) NNMTAsMFDLSMKDK (S) NNMT(0.0)AS(0.99)MFDLS(0.0)MKDK K:TMT10,s:Phosphorylated S RAB11FIP1 137564.1 22 1 56.1 721.17 HUMAN 1 -2.3828 3.0387 MRPPNNSSPVQEDAE-p Q9Y2K1;S412-p MRPPNNSSPVQEDAE 0.540681762076603 0.0760662882899888 0.083 0.206666666666667 4.92949185388618 14.8493893892357 0.083 0.206666666666667 0.321403657488317 0.0327386721667595 1.09112112996371 2.8484156082823 Q9Y2K1 ZBTB1 Q9Y2K1.S412.p_ZBTB1 Q9Y2K1_S412s _1_1_412_412 Q9Y2K1 Q9Y2K1|Q9Y2K1-2 Zinc finger and BTB domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29003.29003.5 31.56 31.56 1.151 8 1 1 0 1055.0912 5191.4659 S412s TMT10 400 (R) GGLENMRPPNNSsPVQEDAENASCELCGLTITEEDLSSHYLAK (H) GGLENMRPPNNS(0.0)S(0.99)PVQEDAENAS(0.0)CELCGLT(0.0)IT(0.0)EEDLS(0.0)S(0.0)HY(0.0)LAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZBTB1 84068.6 4 1 3313.1 54.23 HUMAN 1 4.9295 14.8494 MRPSRAGSWPHCPGA-p Q8IW93;S101-p MRPSRAGSWPHCPGA 0.142230539633047 0.184549564283673 -0.258333333333333 -0.137333333333333 17.3073007409364 9.64603471324703 -0.258333333333333 -0.137333333333333 0.0185895949031113 0.108491703569486 -3.32340752649456 -1.91952925426836 Q8IW93 ARHGEF19 Q8IW93.S101.p_ARHGEF19 Q8IW93_S101s _1_1_101_101 Q8IW93 Q8IW93|Q8IW93-2 Rho guanine nucleotide exchange factor 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21917.22128.3 19.2 15.11 19.2 2 1 1 0 888.7495 2584.2717 S101s TMT10 99 (R) AGsWPHCPGAQPPALEGPWSPR (H) AGS(0.99)WPHCPGAQPPALEGPWS(0.0)PR C:Carbamidomethylation,s:Phosphorylated S ARHGEF19 90051.5 2 1 2080.1 98.61 HUMAN 1 -17.3073 -9.646 MRQARRLSNPCIQRS-p Q5RGS4;S308-p MRQARRLSNPCIQRS 0.180503883126608 0.20198593648838 -0.338 -0.14 14.6664841339707 9.13808637342503 -0.338 -0.14 0.0341469238933647 0.121952683920519 -2.81613089220067 -1.83159907299693 Q5RGS4 PLEKHA1 Q5RGS4.S308.p_PLEKHA1 Q5RGS4_S308s _1_1_308_308 Q5RGS4 Q5RGS4|Q9HB21-2 Pleckstrin homology domain-containing family A member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7108.7108.3 9.52 9.52 99 1 1 1 0 484.9156 1372.7681 S308s TMT10 306 (R) RLsNPCIQR (S) RLS(1.0)NPCIQR C:Carbamidomethylation,s:Phosphorylated S PLEKHA1 44070.4 1 1 4156.2 36.55 HUMAN 1 -14.6665 -9.1381 MRQIASDSPHASPKH-p Q9HCD6-2;S400-p MRQIASDSPHASPKH 0.686733639129555 0.320273560676248 -0.076 0.138666666666667 3.06330992536332 6.53988351043194 -0.076 0.138666666666667 0.493934097316151 0.221825591864699 -0.733242182135275 1.3798501912041 Q9HCD6 TANC2 Q9HCD6.2.S400.p_TANC2 Q9HCD6-2_S400s _1_1_400_400 Q9HCD6-2 Q9HCD6-2|Q9HCD6-4|Q9HCD6-3 Isoform 2 of Protein TANC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6803.6803.3 10.72 10.72 2.426 3 1 1 0 592.6418 1695.943 S400s TMT10 395 (R) QIASDsPHASPK (H) QIAS(0.0)DS(0.99)PHAS(0.0)PK K:TMT10,s:Phosphorylated S TANC2 222282.4 1 6 348.1 351.89 HUMAN 1 -3.0633 6.5399 MRQIASNSPGSSPKT-p Q9C0D5;S444-p MRQIASNSPGSSPKT 0.731998168448742 0.422760098274835 -0.0496666666666667 -0.0846666666666667 2.56912051403324 4.97827782649801 -0.0496666666666667 -0.0846666666666667 0.553462179010838 0.317813409431795 -0.631449643913758 -1.09985440858762 Q9C0D5 TANC1 Q9C0D5.S444.p_TANC1 Q9C0D5_S444s _1_1_444_444 Q9C0D5 Q9C0D5|Q9C0D5-2 Protein TANC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8046.8046.2 16.15 14.65 1.405 4 1 1 0 855.9448 1630.9165 S444s TMT10 439 (R) QIASNsPGSSPK (T) QIAS(0.0)NS(0.99)PGS(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S TANC1 204383.7 2 11 678.1 246.63 HUMAN 1 -2.5691 -4.9783 MRRSAAGSPPAVAAA-p Q86VQ1;S30-p MRRSAAGSPPAVAAA 0.449867846169833 0.409375565038376 0.148666666666667 -0.0923333333333333 6.40991890955556 5.16124836161857 0.148666666666667 -0.0923333333333334 0.228564147993726 0.304701901065852 1.3572735165937 -1.13329189592712 Q86VQ1 GLCCI1 Q86VQ1.S30.p_GLCCI1 Q86VQ1_S30s_1_1_30_30 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11736.11736.3 33.99 30.89 3.222 3 1 1 0 992.4597 2894.4125 S30s N41n TMT10 26 (R) SAAGsPPAVAAAGSGnGAGGGGGVGCAPAAGAGR (L) S(0.0)AAGS(0.99)PPAVAAAGS(0.0)GN(1.0)GAGGGGGVGCAPAAGAGR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated GLCCI1 58707.2 11 1 307.1 373.49 HUMAN 1 6.4099 -5.1612 MRSEPDDSDPFSFDG-p F5H4R6;S242-p MRSEPDDSDPFSFDG 0.310593774948162 0.989785716330993 0.184666666666667 0.00166666666666669 9.49227698083388 0.0676027316822163 0.184666666666667 0.00166666666666669 0.11240155046289 0.984554421396786 1.89361980640608 0.0202681619040369 F5H4R6 NAP1L1 F5H4R6.S242.p_NAP1L1 F5H4R6_S242s _1_1_242_242 F5H4R6 P55209|F5H4R6 Nucleosome assembly protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29536.29536.4 21.34 21.34 1.245 4 1 1 0 997.2018 3905.8275 S242s TMT10 237 (R) SEPDDsDPFSFDGPEIMGCTGCQIDWKK (G) S(0.0)EPDDS(0.99)DPFS(0.0)FDGPEIMGCT(0.0)GCQIDWKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NAP1L1 44911.2 1 7 836.1 215.14 HUMAN 1 9.4923 0.0676 MRSKRVRSLLGRSLE-p Q9NRL3-3;S201-p MRSKRVRSLLGRSLE 0.189011352569334 0.169329673134164 -0.225666666666667 -0.164333333333333 14.1665097260516 10.1411072913251 -0.225666666666667 -0.164333333333333 0.0383132529932115 0.0968031012461611 -2.72354147849045 -2.00541273141227 Q9NRL3 STRN4 Q9NRL3.3.S201.p_STRN4 Q9NRL3-3_S201s _1_1_201_201 Q9NRL3-3 Q9NRL3-3|F5GYK2|Q9NRL3-2 Isoform 3 of Striatin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5592.5592.2 8.51 2.47 99 1 1 1 0 440.7425 800.5101 S201s Hydrogen 199 (R) VRsLLGR (S) VRS(1.0)LLGR s:Phosphorylated S STRN4 82006 2 9 1137.1 173.35 HUMAN 1 -14.1665 -10.1411 MRSRKQRSISEIPKK-p F8W6L3;S498-p MRSRKQRSISEIPKK 0.229401753870038 0.990324797150279 -0.178 -0.00199999999999999 12.2859399313209 0.0630190367873637 -0.178 -0.00199999999999999 0.0590753096708506 0.985594102911401 -2.38315745077643 -0.0189036604984481 F8W6L3 NotFound F8W6L3.S498.p_NotFound F8W6L3_S498s _1_1_498_498 F8W6L3 F8W6L3 Kinesin light chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10503.10503.3 10.23 5.72 1.676 2 1 1 0 480.6143 1359.8612 S498s Hydrogen 498 (R) sISEIPKK (I) S(0.99)IS(0.0)EIPKK K:TMT10-Lys-Only,s:Phosphorylated S KLC1 65941.2 1 1 1242.5 162.93 HUMAN 1 -12.2859 -0.063 MRVHDAESSDEDGYD-p O95049-3;S924-p MRVHDAESSDEDGYD 0.74587727060098 0.448798607940632 -0.049 0.0803333333333334 2.41649610614765 4.63818306148635 -0.049 0.0803333333333334 0.573258350086094 0.343701710781578 -0.599182769338904 1.03711846856036 O95049 TJP3 O95049.3.S924.p_TJP3 O95049-3_S924sS925s_2_2_924_925 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26477.27102.3 12.72 12.72 1.422 4 2 2 0 856.6615 2408.0364 S924s S925s TMT10 919 (R) VHDAEssDEDGYDWGPATDL (-) VHDAES(0.99)S(0.99)DEDGY(0.0)DWGPAT(0.0)DL s:Phosphorylated S TJP3 103593.6 3 30 125.1 544.41 HUMAN 1 -2.4165 4.6382 MRVLNTGSDVEEAVA-p E3W994;S575-p MRVLNTGSDVEEAVA 0.561383737409577 0.788423890521773 -0.0786666666666667 0.029 4.61487752051813 1.43393013534658 -0.0786666666666667 0.029 0.345551074652115 0.718798209233031 -1.0329846536366 0.379402665120793 E3W994 NotFound E3W994.S575.p_NotFound E3W994_S575s _1_1_575_575 E3W994 O75122|J3KR49|E3W994 CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.33053.33053.2 21.04 18.69 1.592 2 1 1 0 1135.0867 2189.2066 S575s TMT10 570 (R) VLNTGsDVEEAVADALK (K) VLNT(0.0)GS(0.99)DVEEAVADALK K:TMT10,s:Phosphorylated S CLASP2 139660.6 23 16 158.1 498.15 HUMAN 1 -4.6149 1.4339 MSALASRSAPAMQSS-p Q8WX93;S719-p MSALASRSAPAMQSS 0.405908266342967 0.0831776836997244 -0.224666666666667 -0.218 7.22833897209287 14.2968415870106 -0.224666666666667 -0.218 0.189306751380325 0.0371805526912789 -1.50092652251756 -2.74589411067941 Q8WX93 PALLD Q8WX93.S719.p_PALLD Q8WX93_S719s _1_1_719_719 Q8WX93 Q8WX93|Q8WX93-3|Q8WX93-4 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13245.13245.3 15.1 15.1 15.1 5 1 1 0 779.7198 2257.18 S719s TMT10 719 (R) sAPAMQSSGSFNYARPK (Q) S(0.99)APAMQS(0.0)S(0.0)GS(0.0)FNY(0.0)ARPK K:TMT10,s:Phosphorylated S PALLD 151930.4 1 5 338.1 354.43 HUMAN 1 -7.2283 -14.2968 MSAVNDESF______-p Q8N488;S227-p MSAVNDESF______ 0.204518295038898 0.00828279311297773 -0.261666666666667 -0.569 13.3398011473446 29.6022714270415 -0.261666666666667 -0.569 0.0463468140305359 0.00109590487109782 -2.57248137344871 -6.30220513767981 Q8N488 RYBP Q8N488.S227.p_RYBP Q8N488_S227s _1_1_227_227 Q8N488 Q8N488 RING1 and YY1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17737.17737.2 11.56 11.56 11.56 2 1 1 0 740.7967 1400.6201 S227s TMT10 218 (K) GDMSAVNDEsF (-) GDMS(0.0)AVNDES(0.99)F s:Phosphorylated S RYBP 25049.3 2 6 2169.1 94.66 HUMAN 1 -13.3398 -29.6023 MSCFSRPSMSPTPLD-p Q9UQ35;S2121-p MSCFSRPSMSPTPLD 0.813072191749547 0.0611592109714098 0.0553333333333333 0.25 1.72777428001205 16.1593116211737 0.0553333333333333 0.25 0.671773042337203 0.0242141282255907 0.447634587364978 3.09662471868728 Q9UQ35 SRRM2 Q9UQ35.S2121.p_SRRM2 Q9UQ35_S2121s _1_1_2121_2121 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17389.17389.3 16.06 10.92 2.231 5 1 1 0 726.6639 2098.0081 S2121s TMT10 2114 (R) MSCFSRPsMSPTPLDR (C) MS(0.0)CFS(0.0)RPS(0.99)MS(0.0)PT(0.0)PLDR C:Carbamidomethylation,s:Phosphorylated S SRRM2 300351.7 6 134 2.1 3310.34 HUMAN 1 1.7278 16.1593 MSDAPGDSPRIHLPL-p Q08174-2;S949-p MSDAPGDSPRIHLPL 0.341170027199715 0.110833927115115 0.144333333333333 -0.179666666666667 8.68316196425556 12.6113687867639 0.144333333333333 -0.179666666666667 0.135420309980779 0.0548104189066926 1.75351755779191 -2.43997663423166 Q08174 PCDH1 Q08174.2.S949.p_PCDH1 Q08174-2_S949s _1_1_949_949 Q08174-2 Q08174-2 Isoform 2 of Protocadherin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20810.20810.2 17.49 13.86 2.459 2 1 1 0 858.3863 1635.7998 S949s TMT10 939 (K) FNLMSDAPGDsPR (I) FNLMS(0.0)DAPGDS(0.99)PR s:Phosphorylated S PCDH1 134290.1 4 2 666.1 249.91 HUMAN 1 8.6832 -12.6114 MSDAYDRTMRQRALS-p P00491;T169-p MSDAYDRTMRQRALS 0.310009135248026 0.00550441818666763 0.171333333333333 0.613666666666667 9.50895698476688 32.7638798378703 0.171333333333333 0.613666666666667 0.111970676346241 0.000529190472046496 1.89651062632506 7.30614583612631 P00491 PNP P00491.T169.p_PNP P00491_T169t _1_1_169_169 P00491 P00491 Purine nucleoside phosphorylase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17290.17290.4 15.14 10.02 3.841 3 1 1 0 587.0178 2265.0742 T169t TMT10 155 (R) FGDRFPAMSDAYDRtMR (Q) FGDRFPAMS(0.0)DAY(0.0)DRT(0.99)MR t:Phosphorylated T PNP 32345.5 2 1 5940.1 15.14 HUMAN 1 9.509 32.7639 MSEKDSLSEEVQDLK-p Q14789-2;S1758-p MSEKDSLSEEVQDLK 0.424703032265256 0.0467013505068458 -0.185333333333333 0.245333333333333 6.85447197428972 17.8015185134986 -0.185333333333333 0.245333333333333 0.206325450752302 0.0165900673322417 -1.43551447939604 3.41944672605987 Q14789 GOLGB1 Q14789.2.S1758.p_GOLGB1 Q14789-2_S1758s _1_1_1758_1758 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22810.22810.3 14.61 12.71 1.412 2 1 1 0 600.973 1720.9369 S1758s TMT10 1755 (K) DSLsEEVQDLK (H) DS(0.0)LS(0.99)EEVQDLK K:TMT10,s:Phosphorylated S GOLGB1 378557.2 7 17 93.1 610.98 HUMAN 1 -6.8545 17.8015 MSFYVRPSPAKRRLS-p Q9NYB0;S36-p MSFYVRPSPAKRRLS 0.536318608089857 0.00514141392999062 0.102666666666667 -0.647 5.0048785856567 33.3096139846132 0.102666666666667 -0.647 0.315872735473695 0.000466700860396254 1.10495205943856 -7.49216339322873 Q9NYB0 TERF2IP Q9NYB0.S36.p_TERF2IP Q9NYB0_S36s _1_1_36_36 Q9NYB0 Q9NYB0 Telomeric repeat-binding factor 2-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16580.16580.3 17.07 10.22 4.905 5 1 1 0 761.3693 2202.1265 S36s TMT10 24 (R) DDGSSMSFYVRPsPAK (R) DDGS(0.0)S(0.0)MS(0.0)FY(0.0)VRPS(0.99)PAK K:TMT10,s:Phosphorylated S TERF2IP 44430.3 6 1 1047.1 184.33 HUMAN 1 5.0049 -33.3096 MSGSKGKSPASVFRT-p Q32NC0;S158-p MSGSKGKSPASVFRT 0.706129390725202 0.0247752414469124 0.0893333333333333 -0.433666666666667 2.84202345186254 21.848340946992 0.0893333333333333 -0.433666666666667 0.519753777985108 0.00653380103412891 0.688138674183024 -4.2828458837134 Q32NC0 C18orf21 Q32NC0.S158.p_C18orf21 Q32NC0_S158s _1_1_158_158 Q32NC0 Q32NC0|Q32NC0-2 UPF0711 protein C18orf21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12480.12480.2 7.62 2.99 4.342 2 1 1 0 743.9117 1406.852 S158s TMT10 156 (K) GKsPASVFR (T) GKS(0.99)PAS(0.0)VFR K:TMT10,s:Phosphorylated S C18orf21 25168.6 1 2 6160.1 13.55 HUMAN 1 2.842 -21.8483 MSHCRQPSDSSVDKF-p P42858;S640-p MSHCRQPSDSSVDKF 0.42081761725115 0.0175936501308428 0.122 -0.354666666666667 6.93487261976645 24.1788313434657 0.122 -0.354666666666667 0.202540901197521 0.00382047063242041 1.44960812545851 -4.83298605703677 P42858 HTT P42858.S640.p_HTT P42858_S640s_1_1_640_640 P42858 P42858 Huntingtin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17803.17803.4 15.87 14 3.567 4 1 1 0 932.1931 3662.8121 Q638q S640s Hydrogen 638 (R) qPsDSSVDKFVLRDEATEPGDQENKPCR (I) Q(1.0)PS(0.99)DS(0.0)S(0.0)VDKFVLRDEAT(0.0)EPGDQENKPCR K:TMT10-Lys-Only,C:Carbamidomethylation,q:Pyroglutamic acid,s:Phosphorylated S HTT 351590.8 9 5 343.1 353.16 HUMAN 1 6.9349 -24.1788 MSHLKVGSAADIPIN-p P21333-2;S1959-p MSHLKVGSAADIPIN 0.0876629277158761 0.0789638563832102 0.330333333333333 0.284 22.5271517915083 14.6338993441525 0.330333333333333 0.284 0.00558836573155468 0.0344040892465279 4.44352777578191 2.80828861626525 P21333 FLNA P21333.2.S1959.p_FLNA P21333-2_S1959s _1_1_1959_1959 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.37537.37537.3 16.02 14.15 7.82 7 1 1 0 1068.2326 3122.7146 S1959s TMT10 1957 (K) VGsAADIPINISETDLSLLTATVVPPSGR (E) VGS(0.99)AADIPINIS(0.0)ET(0.0)DLS(0.0)LLT(0.0)AT(0.0)VVPPS(0.0)GR s:Phosphorylated S FLNA 282751.6 2 13 198.1 454.47 HUMAN 1 22.5272 14.6339 MSIAGDATPLLDEMD-p Q7KZ85;T1718-p MSIAGDATPLLDEMD 0.518852766909706 0.739466349441332 0.095 -0.0643333333333333 5.26273804217071 1.80774845580694 0.095 -0.0643333333333334 0.29766391932027 0.659515724119905 1.15199560599902 -0.465740484282531 Q7KZ85 SUPT6H Q7KZ85.T1718.p_SUPT6H Q7KZ85_T1718t _1_1_1718_1718 Q7KZ85 Q7KZ85|Q7KZ85-3|Q7KZ85-2 Transcription elongation factor SPT6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29202.29202.3 21.29 21.29 1.737 7 1 1 0 1135.8668 3325.6113 T1718t Hydrogen 1696 (R) LTPRPSPSPMIESTPMSIAGDAtPLLDEMDR (-) LT(0.0)PRPS(0.0)PS(0.0)PMIES(0.0)T(0.0)PMS(0.0)IAGDAT(0.99)PLLDEMDR t:Phosphorylated T SUPT6H 200324.3 3 14 279.1 388.92 HUMAN 1 5.2627 -1.8077 MSIWDVKSLESALKD-p O15143;S361-p MSIWDVKSLESALKD 0.298291057314039 0.13364299756999 -0.164 -0.173666666666667 9.87631041019678 11.5218429512649 -0.164 -0.173666666666667 0.102889003017637 0.0704394092231856 -1.96022915008643 -2.24672956693861 O15143 ARPC1B O15143.S361.p_ARPC1B O15143_S361s _1_1_361_361 O15143 O15143 Actin-related protein 2/3 complex subunit 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16932.16932.2 9.15 9.15 9.147 2 1 1 0 643.3629 1205.7506 S361s TMT10 361 (K) sLESALK (D) S(0.99)LES(0.0)ALK K:TMT10,s:Phosphorylated S ARPC1B 41747.8 2 2 5035.1 23.68 HUMAN 1 -9.8763 -11.5218 MSKDAQPSFSAEDIA-p P25205-2;S320-p MSKDAQPSFSAEDIA 0.272925101260209 0.858111705720329 0.191666666666667 0.018 10.6814950381808 0.935448746716685 0.191666666666667 0.018 0.0854772410878287 0.806222891853267 2.10039901323654 0.257581959262137 P25205 MCM3 P25205.2.S320.p_MCM3 P25205-2_S320s _1_1_320_320 P25205-2 P25205-2|J3KQ69 Isoform 2 of DNA replication licensing factor MCM3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18589.18589.2 13.61 13.61 2.137 2 1 1 0 958.9733 1836.9744 S320s TMT10 316 (K) DAQPsFSAEDIAK (I) DAQPS(0.99)FS(0.0)AEDIAK K:TMT10,s:Phosphorylated S MCM3 96534.2 2 2 136.1 528.96 HUMAN 1 10.6815 0.9354 MSKLDEGTPPEPKGT-p Q9Y4G6;T1843-p MSKLDEGTPPEPKGT 0.919774718344234 0.0372582401182819 0.0216666666666667 0.473 0.709010248621888 19.2045971819794 0.0216666666666667 0.473 0.849374024196986 0.0120099246263428 0.199204672607865 3.70699534673546 Q9Y4G6 TLN2 Q9Y4G6.T1843.p_TLN2 Q9Y4G6_T1843t _1_1_1843_1843 Q9Y4G6 Q9Y4G6|A0A1B0GVU7|H0YN01 Talin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13332.13332.2 10.67 10.67 99 1 1 1 0 810.9167 1540.8623 T1843t TMT10 1839 (K) LDEGtPPEPK (G) LDEGT(1.0)PPEPK K:TMT10,t:Phosphorylated T TLN2 273947.6 3 32 267.2 395.2 HUMAN 1 0.709 19.2046 MSKLGFLSERSTSPI-p O60673;S1114-p MSKLGFLSERSTSPI 0.490692853704506 0.834844345076094 -0.127333333333333 -0.056 5.69452258938343 1.09872092139162 -0.127333333333333 -0.056 0.269493156411944 0.776475769616115 -1.2299481905178 -0.298431649703446 O60673 REV3L O60673.S1114.p_REV3L O60673_S1114s _1_1_1114_1114 O60673 O60673|O60673-2 DNA polymerase zeta catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21179.21179.2 9.15 3.17 99 1 1 1 0 565.7942 1050.6145 S1114s TMT10 1110 (K) LGFLsER (S) LGFLS(1.0)ER s:Phosphorylated S REV3L 356192.6 1 6 524.1 282.7 HUMAN 1 -5.6945 -1.0987 MSKNVSQSQMAKLNQ-p P61011;S453-p MSKNVSQSQMAKLNQ 0.6001203379453 0.734508697078168 0.0693333333333333 -0.0346666666666667 4.09594040280142 1.84771682184851 0.0693333333333333 -0.0346666666666667 0.389408977609812 0.653474007496653 0.935424829024669 -0.474753737992657 P61011 SRP54 P61011.S453.p_SRP54 P61011_S453s_1_1_453_453 P61011 P61011|P61011-2|G3V4F7 Signal recognition particle 54 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5296.5296.2 9.17 9.17 2.348 2 1 1 0 773.889 1450.8088 S453s M455m TMT10 449 (K) NVSQsQmAK (L) NVS(0.0)QS(0.99)QM(1.0)AK K:TMT10,s:Phosphorylated S,m:Oxidized methionine SRP54 55989.1 2 4 3942.1 40.43 HUMAN 1 4.0959 -1.8477 MSKRYDGSQQALDLK-p Q9UBU9;S223-p MSKRYDGSQQALDLK 0.745259665546982 0.878808270645587 -0.0593333333333333 -0.0186666666666667 2.42344716544815 0.788219727369071 -0.0593333333333334 -0.0186666666666667 0.572341560724663 0.834022999701102 -0.600661640653485 -0.219856953352359 Q9UBU9 NXF1 Q9UBU9.S223.p_NXF1 Q9UBU9_S223s _1_1_223_223 Q9UBU9 Q9UBU9|Q9UBU9-2|B4E227 Nuclear RNA export factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13053.13053.3 10.7 7.58 10.699 2 1 1 0 644.6718 1852.0329 S223s TMT10 219 (K) RYDGsQQALDLK (G) RY(0.0)DGS(0.99)QQALDLK K:TMT10,s:Phosphorylated S NXF1 70694.6 1 2 2627.1 76.41 HUMAN 1 -2.4234 -0.7882 MSKSVPPSPEKILNG-p Q9ULK2;S253-p MSKSVPPSPEKILNG 0.90978822177682 0.120732779557619 -0.0166666666666667 -0.162666666666667 0.806129819814704 12.1061092219115 -0.0166666666666667 -0.162666666666667 0.830590611925076 0.0615728247243624 -0.224515239218505 -2.34998487031309 Q9ULK2 ATXN7L1 Q9ULK2.S253.p_ATXN7L1 Q9ULK2_S253s _1_1_253_253 Q9ULK2 Q9ULK2|Q9ULK2-3 Ataxin-7-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8975.9179.2 9.29 6.3 9.287 2 1 1 0 689.8726 1298.772 S253s TMT10 249 (K) SVPPsPEK (I) S(0.0)VPPS(0.99)PEK K:TMT10,s:Phosphorylated S ATXN7L1 92425.6 5 1 6083.1 14.12 HUMAN 1 -0.8061 -12.1061 MSLKDSGSDLSHRPK-p O95251;S164-p MSLKDSGSDLSHRPK 0.970871156591453 0.122241979077937 0.00766666666666665 0.317333333333333 0.252298498297453 12.0382642462403 0.00766666666666665 0.317333333333333 0.943561365402379 0.0625422606780422 0.0741416307939271 2.33795250452323 O95251 KAT7 O95251.S164.p_KAT7 O95251_S162sS164s_2_2_162_164 O95251 O95251|O95251-4 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11288.11314.5 9.98 9.98 9.98 4 2 2 0 524.8625 2460.3484 S162s S164s TMT10 156 (K) DMSLKDsGsDLSHRPK (R) DMS(0.0)LKDS(0.99)GS(0.99)DLS(0.0)HRPK K:TMT10,s:Phosphorylated S KAT7 71325.8 3 18 691.1 243.06 HUMAN 1 0.2523 12.0383 MSLRSYGSREGSVSS-p P25054;S98-p MSLRSYGSREGSVSS 0.446797361450678 0.0366715842640995 -0.122 -0.392666666666667 6.45602904114752 19.3144082671566 -0.122 -0.392666666666667 0.226150262345458 0.0117100614282091 -1.3654160105341 -3.72999672047341 P25054 APC P25054.S98.p_APC P25054_S98s _1_1_98_98 P25054 P25054|P25054-3|P25054-2|E7EMH9 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4184.4184.3 10.99 10.43 2.449 6 1 1 0 527.5798 1500.7604 S98s TMT10 95 (R) SYGsREGSVSSR (S) S(0.0)Y(0.0)GS(0.99)REGS(0.0)VS(0.0)S(0.0)R s:Phosphorylated S APC 313808.5 1 2 33.1 890.71 HUMAN 1 -6.456 -19.3144 MSLVKSLSTEVEPKE-p Q8IWB9;S196-p MSLVKSLSTEVEPKE 0.177143878244816 0.00328159303640701 -0.24 -0.725333333333333 14.9024495363314 37.182128406845 -0.24 -0.725333333333333 0.0323411192966762 0.000191331800907496 -2.86017544650176 -8.93334807003519 Q8IWB9 TEX2 Q8IWB9.S196.p_TEX2 Q8IWB9_S196s _1_1_196_196 Q8IWB9 Q8IWB9-2|A0A087WVA8 Testis-expressed protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9603.9603.3 15.05 15.05 1.145 4 1 1 0 768.0656 2222.2181 S196s TMT10 194 (K) SLsTEVEPKESPHPAR (H) S(0.0)LS(0.99)T(0.0)EVEPKES(0.0)PHPAR K:TMT10,s:Phosphorylated S TEX2 125928 6 7 300.1 376.78 HUMAN 1 -14.9024 -37.1821 MSPDKPVSVKISFED-p Q9Y6M7-13;S1115-p MSPDKPVSVKISFED 0.427414948238645 0.387616990220564 0.114333333333333 0.0823333333333334 6.79792296051926 5.47091743503711 0.114333333333333 0.0823333333333334 0.209029558827409 0.283731958924196 1.42559223801465 1.18943906345765 Q9Y6M7 SLC4A7 Q9Y6M7.13.S1115.p_SLC4A7 Q9Y6M7-13_S1115s _1_1_1115_1115 Q9Y6M7-13 Q9Y6M7-7|Q9Y6M7-8|Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-3|Q9Y6M7-5 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12170.12170.4 12.23 12.23 2.681 3 1 1 0 514.7839 1976.1454 S1115s TMT10 1106 (R) SNMSPDKPVsVK (I) S(0.0)NMS(0.0)PDKPVS(0.99)VK K:TMT10,s:Phosphorylated S SLC4A7 128884.6 4 18 207.1 445.25 HUMAN 1 6.7979 5.4709 MSPGVAGSPRIPPSQ-p Q15596;S499-p MSPGVAGSPRIPPSQ 0.225563990023236 0.00278494099914611 0.187666666666667 0.689333333333333 12.4219000072085 38.6769307429701 0.187666666666667 0.689333333333333 0.0572545491639245 0.000135614749377503 2.40739929827256 9.55189868075243 Q15596 NCOA2 Q15596.S499.p_NCOA2 Q15596_S499s _1_1_499_499 Q15596 Q15596|E7EWM1 Nuclear receptor coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7957.7957.2 12.39 7.59 6.836 2 1 1 0 634.3072 1187.6404 S499s TMT10 492 (R) MSPGVAGsPR (I) MS(0.0)PGVAGS(0.99)PR s:Phosphorylated S NCOA2 160009.7 1 6 290.1 381.81 HUMAN 1 12.4219 38.6769 MSQPGSPSPKTPTPS-p F5GWX5;S1530-p MSQPGSPSPKTPTPS 0.621729850184917 0.0546189545776262 0.11 0.324333333333333 3.83720144461644 16.833022461478 0.11 0.324333333333333 0.413313751937177 0.0207346998900123 0.885879764524913 3.22738999048459 F5GWX5 CHD4 F5GWX5.S1530.p_CHD4 F5GWX5_S1530s _1_1_1530_1530 F5GWX5 Q14839|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8601.8601.2 12.31 12.31 1.659 3 1 1 0 777.3931 1473.8136 S1530s TMT10 1523 (K) MSQPGSPsPK (T) MS(0.0)QPGS(0.0)PS(0.99)PK K:TMT10,s:Phosphorylated S CHD4 218583 2 20 49.1 753.68 HUMAN 1 3.8372 16.833 MSQVDVDSGIENMEV-p O95155-4;S124-p MSQVDVDSGIENMEV 0.282067524168147 0.305259630703203 0.167333333333333 0.159 10.3921867717046 6.80666721836646 0.167333333333333 0.159 0.0913653080478393 0.208609113811532 2.0499367633018 1.42674374140216 O95155 UBE4B O95155.4.S124.p_UBE4B O95155-4_S124s _1_1_124_124 O95155-4 O95155-4|O95155-2 Isoform 4 of Ubiquitin conjugation factor E4 B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17998.17998.4 21.47 21.47 9.216 3 1 1 0 709.3107 2754.2508 S124s TMT10 116 (K) SMSQVDVDsGIENMEVDENDRR (E) S(0.0)MS(0.0)QVDVDS(0.99)GIENMEVDENDRR s:Phosphorylated S UBE4B 152984.7 2 6 989.1 191.62 HUMAN 1 10.3922 6.8067 MSRARIGSDPLAYEP-p P19634;S703-p MSRARIGSDPLAYEP 0.0150523856439025 0.00752314179680432 -1.317 -0.915 43.0009459186572 30.3585708395703 -1.317 -0.915 5.01078084018059e-05 0.000920752519782475 -11.5965904759912 -6.53144970116475 P19634 SLC9A1 P19634.S703.p_SLC9A1 P19634_S703s _1_1_703_703 P19634 P19634 Sodium/hydrogen exchanger 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21302.21302.3 15.43 14.22 10.564 2 1 1 0 576.6394 1647.9358 S703s TMT10 701 (R) IGsDPLAYEPK (E) IGS(0.99)DPLAY(0.0)EPK K:TMT10,s:Phosphorylated S SLC9A1 91274.8 5 6 732.1 235.73 HUMAN 1 -43.0009 -30.3586 MSRETTDTDTADQVI-p O43707;T842-p MSRETTDTDTADQVI 0.28377835512685 0.940373837726395 -0.17 0.00900000000000003 10.3231116725146 0.380522977277543 -0.17 0.00900000000000003 0.092830103090167 0.916110165522377 -2.03790618037261 0.110338315121407 O43707 ACTN4 O43707.T842.p_ACTN4 O43707_T842t _1_1_842_842 O43707 O43707|O43707-2|O43707-3 Alpha-actinin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26452.26452.3 16.52 16.52 1.148 5 1 1 0 760.7065 2200.1385 T842t TMT10 838 (R) ETTDtDTADQVIASFK (V) ET(0.0)T(0.0)DT(0.99)DT(0.0)ADQVIAS(0.0)FK K:TMT10,t:Phosphorylated T ACTN4 105308.6 1 9 1097.1 178.17 HUMAN 1 -10.3231 0.3805 MSRGLSTSLPDLDSE-p Q659C4;S363-p MSRGLSTSLPDLDSE 0.315881742386154 0.336818229127304 0.153666666666667 0.093 9.36832016820383 6.26236297379312 0.153666666666667 0.093 0.115655950777492 0.23646327629654 1.87214193910318 1.33084012285437 Q659C4 LARP1B Q659C4.S363.p_LARP1B Q659C4_S363s _1_1_363_363 Q659C4 Q659C4|Q659C4-2|Q659C4-9|D6R9W6|Q659C4-4 La-related protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32787.32787.2 13.27 13.27 1.244 4 1 1 0 1262.653 2444.3325 S363s TMT10 359 (R) GLSTsLPDLDSEPWIEVK (K) GLS(0.0)T(0.0)S(0.99)LPDLDS(0.0)EPWIEVK K:TMT10,s:Phosphorylated S LARP1B 105833.8 5 5 551.1 274.41 HUMAN 1 9.3683 6.2624 MSRKRKASVHSSGRG-p Q9Y5B9;S1023-p MSRKRKASVHSSGRG 0.235461780446329 0.00270482153372727 0.483666666666667 0.802 12.0350458424114 39.0132221473842 0.483666666666667 0.802 0.0625886257278273 0.00012550984269449 2.33855226837888 9.69625927173715 Q9Y5B9 SUPT16H Q9Y5B9.S1023.p_SUPT16H Q9Y5B9_S1023s _1_1_1023_1023 Q9Y5B9 Q9Y5B9 FACT complex subunit SPT16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.2104.2104.3 11.61 11.61 4.594 3 1 1 0 413.2134 1157.6588 S1023s Hydrogen 1021 (R) KAsVHSSGR (G) KAS(0.99)VHS(0.0)S(0.0)GR K:TMT10-Lys-Only,s:Phosphorylated S SUPT16H 120482.1 1 8 1519.1 134.4 HUMAN 1 12.035 39.0132 MSRPVELSDRETLLN-p P50991;S158-p MSRPVELSDRETLLN 0.577253571803451 0.553828440056721 0.086 -0.0686666666666666 4.389533248349 3.45703047551911 0.086 -0.0686666666666666 0.363954149465958 0.451125059604237 0.990894605537795 -0.811681030976003 P50991 CCT4 P50991.S158.p_CCT4 P50991_S158s _1_1_158_158 P50991 P50991|P50991-2 T-complex protein 1 subunit delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29349.29349.4 7.09 7.09 1.405 9 1 1 0 983.0127 3849.068 S158s TMT10 144 (K) GIEILTDMSRPVELsDRETLLNSATTSLNSK (V) GIEILT(0.0)DMS(0.0)RPVELS(0.99)DRET(0.0)LLNS(0.0)AT(0.0)T(0.0)S(0.0)LNS(0.0)K K:TMT10,s:Phosphorylated S CCT4 58436.7 1 2 2761.1 71.47 HUMAN 1 4.3895 -3.457 MSRVASVSQNAIVSA-p O75694;S319-p MSRVASVSQNAIVSA 0.0745793811074775 0.0775438649857611 0.407666666666667 0.283333333333333 24.1605620247859 14.7319551608412 0.407666666666667 0.283333333333333 0.00383657592770879 0.0336360108513292 4.83426672269477 2.82652455227099 O75694 NUP155 O75694.S319.p_NUP155 O75694_S319s _1_1_319_319 O75694 O75694|O75694-2|E9PF10 Nuclear pore complex protein Nup155 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24150.24150.3 9.41 6.48 1.13 3 1 1 0 679.6957 1957.1028 S319s TMT10 315 (R) VASVsQNAIVSAAGNIAR (T) VAS(0.0)VS(0.99)QNAIVS(0.0)AAGNIAR s:Phosphorylated S NUP155 156793.9 1 1 3338.1 53.46 HUMAN 1 24.1606 14.732 MSSKHNMSGGEFQGK-p Q15648;S1347-p MSSKHNMSGGEFQGK 0.398798550017594 0.703345634956391 0.117666666666667 -0.0443333333333333 7.36752679152253 2.10087912763961 0.117666666666667 -0.0443333333333333 0.183335818100632 0.616470199251594 1.52520576387928 -0.530965524607966 Q15648 MED1 Q15648.S1347.p_MED1 Q15648_S1347s _1_1_1347_1347 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8279.8279.3 9.49 5.87 99 1 1 1 0 577.2762 1649.847 S1347s TMT10 1344 (K) HNMsGGEFQGK (R) HNMS(1.0)GGEFQGK K:TMT10,s:Phosphorylated S MED1 169445 3 21 115.1 566.87 HUMAN 1 7.3675 -2.1009 MSSNQSISSPVLDAV-p Q9UQ35;S1403-p MSSNQSISSPVLDAV 0.827721689148675 0.260943878374955 -0.031 0.136 1.57969779922828 7.6887022434328 -0.031 0.136 0.695072682051551 0.170266722253981 -0.413571349175412 1.58062699554681 Q9UQ35 SRRM2 Q9UQ35.S1403.p_SRRM2 Q9UQ35_S1403sS1404s_2_2_1403_1404 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17151.17151.3 10.79 10.79 1.66 7 2 2 0 921.4283 2586.3507 M1396m S1403s S1404s TMT10 1394 (K) AGmSSNQSIssPVLDAVPRTPSR (E) AGM(1.0)S(0.0)S(0.0)NQS(0.0)IS(0.99)S(0.99)PVLDAVPRT(0.0)PS(0.0)R m:Oxidized methionine,s:Phosphorylated S SRRM2 300351.7 16 207 2.1 3310.34 HUMAN 1 -1.5797 7.6887 MSSPEDDSDTKRLSK-p Q15424;S389-p MSSPEDDSDTKRLSK 0.606986770531894 0.0221946483915287 -0.092 0.338666666666667 4.01213405293531 22.5879104359257 -0.092 0.338666666666667 0.39699642390231 0.0055107277573525 -0.919448332935379 4.45280814472632 Q15424 SAFB Q15424.S389.p_SAFB Q15424_S389s _1_1_389_389 Q15424 Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8892.8892.2 12.14 12.14 2.954 4 1 1 0 875.3851 1669.7991 S389s TMT10 382 (K) MSSPEDDsDTK (R) MS(0.0)S(0.0)PEDDS(0.99)DT(0.0)K K:TMT10,s:Phosphorylated S SAFB 103096.3 2 29 83.1 629.62 HUMAN 1 -4.0121 22.5879 MSSSADFSDEDDFSQ-p F6QMI7;S19-p MSSSADFSDEDDFSQ 0.248033262256709 0.318774149880918 0.197 -0.101 11.5652607103299 6.56517070975551 0.197 -0.101 0.0697387130937326 0.220537744709325 2.2554526739756 -1.38430375735083 F6QMI7 DST F6QMI7.S19.p_DST F6QMI7_S19s _1_1_19_19 F6QMI7 F6QMI7|Q03001-11 Dystonin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17641.17641.3 17.01 17.01 4.199 6 1 1 0 861.0213 2501.0849 S19s TMT10 10 (R) CSMSSSADFsDEDDFSQK (S) CS(0.0)MS(0.0)S(0.0)S(0.0)ADFS(0.99)DEDDFS(0.0)QK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DST 636850.7 2 1 796.2 223.72 HUMAN 1 11.5653 -6.5652 MSSSGLGSPNRSSPS-p Q9NZN8;S165-p MSSSGLGSPNRSSPS 0.788490321907373 0.435386000199679 0.0473333333333333 0.120333333333333 1.98976630617196 4.81189239013661 0.0473333333333333 0.120333333333333 0.63244588236878 0.330225617524697 0.506534521089176 1.06926166327743 Q9NZN8 CNOT2 Q9NZN8.S165.p_CNOT2 Q9NZN8_S165s _1_1_165_165 Q9NZN8 Q9NZN8|Q9NZN8-5|Q9NZN8-4 CCR4-NOT transcription complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7502.7502.2 17.5 14.9 4.771 6 1 1 0 852.3846 1623.7958 S165s TMT10 155 (R) TNSMSSSGLGsPNR (S) T(0.0)NS(0.0)MS(0.0)S(0.0)S(0.0)GLGS(0.99)PNR s:Phosphorylated S CNOT2 59907.8 20 2 1210.1 166.67 HUMAN 1 1.9898 4.8119 MSTYKRATLDEEDLV-p P42892;T25-p MSTYKRATLDEEDLV 0.596182577092354 0.377380138632968 0.0723333333333333 0.108333333333333 4.14518918391326 5.62086569046057 0.0723333333333333 0.108333333333333 0.385018042463105 0.274102774129643 0.944782871672669 1.21644427053897 P42892 ECE1 P42892.T25.p_ECE1 P42892_T25t _1_1_25_25 P42892 P42892|P42892-4|P42892-3|B4DKB2 Endothelin-converting enzyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26249.26249.3 26.95 26.95 4.731 5 1 1 0 1251.9254 3673.7932 T25t TMT10 23 (K) RAtLDEEDLVDSLSEGDAYPNGLQVNFHSPR (S) RAT(0.99)LDEEDLVDS(0.0)LS(0.0)EGDAY(0.0)PNGLQVNFHS(0.0)PR t:Phosphorylated T ECE1 87960.8 2 1 3105.1 60.53 HUMAN 1 4.1452 5.6209 MSVISGISSRGSTVR-p Q8N3U4-2;S1064-p MSVISGISSRGSTVR 0.289415276785275 0.739888155609767 0.201 0.04 10.1558173196544 1.80398741233079 0.201 0.04 0.0964757732326415 0.660087120207744 2.00879472739142 0.464890292807885 Q8N3U4 STAG2 Q8N3U4.2.S1064.p_STAG2 Q8N3U4-2_S1064s _1_1_1064_1064 Q8N3U4-2 Q8N3U4-2 Isoform 2 of Cohesin subunit SA-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24897.24897.3 22.89 22.89 1.242 6 1 1 0 802.0491 2324.1601 S1064s TMT10 1046 (R) NSLLAGGDDDTMSVISGIsSR (G) NS(0.0)LLAGGDDDT(0.0)MS(0.0)VIS(0.0)GIS(0.99)S(0.0)R s:Phosphorylated S STAG2 146947.1 1 3 3646.1 46.14 HUMAN 1 10.1558 1.804 MSVQPTVSLGGFEIT-p P06748;S88-p MSVQPTVSLGGFEIT 0.558763347555316 0.0755847656453762 0.0776666666666667 0.198 4.66569773946124 14.8862172926432 0.0776666666666667 0.198 0.341531075742345 0.03246222404013 1.04242314833003 2.85529236358978 P06748 NPM1 P06748.S88.p_NPM1 P06748_S88s _1_1_88_88 P06748 P06748|P06748-2|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36170.36170.3 22.41 22.41 2.283 4 1 1 0 846.1195 2456.3784 S88s TMT10 81 (K) MSVQPTVsLGGFEITPPVVLR (L) MS(0.0)VQPT(0.0)VS(0.99)LGGFEIT(0.0)PPVVLR s:Phosphorylated S NPM1 32745.6 8 6 78.1 640.75 HUMAN 1 4.6657 14.8862 MSWLRSSS_______-p Q13439-5;S2243-p MSWLRSSS_______ 0.601190727564913 0.150956174272158 0.103 0.260666666666667 4.08152223183867 10.7990174023439 0.103 0.260666666666667 0.39070392739301 0.0831951980170342 0.93268091235394 2.11999922106158 Q13439 GOLGA4 Q13439.5.S2243.p_GOLGA4 Q13439-5_S2243s _1_1_2243_2243 Q13439-5 Q13439-5|Q13439-4 Isoform 5 of Golgin subfamily A member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26569.26569.2 10.14 10.14 1.329 4 1 1 0 688.336 1295.6979 S2243s TMT10 2235 (R) LMSWLRSSs (-) LMS(0.0)WLRS(0.0)S(0.0)S(0.99) s:Phosphorylated S GOLGA4 263236.4 1 11 575.1 268.28 HUMAN 1 4.0815 10.799 MTDLDMLSPIHTPQR-p O60784-2;S160-p MTDLDMLSPIHTPQR 0.908771749351651 0.234576511217101 0.019 -0.13 0.81613440184824 8.29236626054172 0.019 -0.13 0.828679432227533 0.148171055277088 0.227099718607574 -1.68528916869691 O60784 TOM1 O60784.2.S160.p_TOM1 O60784-2_S160s _1_1_160_160 O60784-2 O60784-2|O60784-4 Isoform 2 of Target of Myb protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31777.31777.3 25.22 25.22 4.315 3 1 1 0 869.7551 2527.2886 S160s TMT10 148 (K) GLEFPMTDLDMLsPIHTPQR (T) GLEFPMT(0.0)DLDMLS(0.99)PIHT(0.0)PQR s:Phosphorylated S TOM1 54158.9 5 2 1385.1 148 HUMAN 1 0.8161 -8.2924 MTECRRASSPSLIER-p A1L170-2;S265-p MTECRRASSPSLIER 0.679937460483085 0.0641800916944384 0.0613333333333333 0.213666666666667 3.13955540723486 15.8750487431853 0.0613333333333333 0.213666666666667 0.48533818230388 0.0258520582425598 0.748617800209449 3.0421061587702 A1L170 C1orf226 A1L170.2.S265.p_C1orf226 A1L170-2_S265s _1_1_265_265 A1L170-2 A1L170|A1L170-2 Isoform 2 of Uncharacterized protein C1orf226 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7374.7374.3 10.08 10.08 1.18 3 1 1 0 475.5859 1344.7797 S265s TMT10 263 (R) RAsSPSLIER (N) RAS(0.99)S(0.0)PS(0.0)LIER s:Phosphorylated S C1orf226 33805.4 10 4 1114.1 175.67 HUMAN 1 3.1396 15.875 MTEFSNPSPSTSISA-p Q9BTX1;S500-p MTEFSNPSPSTSISA 0.814345866634866 0.183797808085581 0.033 -0.136 1.71368071190244 9.67361102431842 0.033 -0.136 0.673956597099736 0.10780499842516 0.4444176486289 -1.92430735820457 Q9BTX1 NDC1 Q9BTX1.S500.p_NDC1 Q9BTX1_S500s _1_1_500_500 Q9BTX1 Q9BTX1|Q9BTX1-2|Q9BTX1-5|Q9BTX1-6 Nucleoporin NDC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25711.25922.3 26.94 26.94 3.057 10 1 1 0 1142.2046 3344.6357 S500s TMT10 484 (R) LWTSASDQQMTEFSNPsPSTSISAEGK (T) LWT(0.0)S(0.0)AS(0.0)DQQMT(0.0)EFS(0.0)NPS(0.99)PS(0.0)T(0.0)S(0.0)IS(0.0)AEGK K:TMT10,s:Phosphorylated S NDC1 76988 10 13 1059.1 182.55 HUMAN 1 1.7137 -9.6736 MTETRSKSFDYGSLS-p Q5T1R4;S1012-p MTETRSKSFDYGSLS 0.427853715175935 0.202986687577423 0.126 0.162666666666667 6.78937252892205 9.1088298493216 0.126 0.162666666666667 0.209441503623879 0.122776999344553 1.42409124422889 1.82653785853236 Q5T1R4 HIVEP3 Q5T1R4.S1012.p_HIVEP3 Q5T1R4_S1012s _1_1_1012_1012 Q5T1R4 Q5T1R4|Q5T1R4-2 Transcription factor HIVEP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26272.26272.3 18.02 18.02 2.222 6 1 1 0 856.4306 2487.3081 S1012s TMT10 1012 (K) sFDYGSLSLTGPSAPAPVAPPAR (V) S(0.99)FDY(0.0)GS(0.0)LS(0.0)LT(0.0)GPS(0.0)APAPVAPPAR s:Phosphorylated S HIVEP3 261285.6 3 30 465.1 303.46 HUMAN 1 6.7894 9.1088 MTKYKPESEELTAER-p P07237;S331-p MTKYKPESEELTAER 0.681650302110274 0.397507286408576 0.062 0.0946666666666667 3.12356825233297 5.32619982133698 0.062 0.0946666666666667 0.487128091230103 0.293345896800987 0.745400573660169 1.16326581765634 P07237 P4HB P07237.S331.p_P4HB P07237_S331s _1_1_331_331 P07237 P07237|H7BZ94 Protein disulfide-isomerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10497.10497.3 12.72 12.72 2.076 3 1 1 0 664.0025 1910.0271 S331s TMT10 327 (K) YKPEsEELTAER (I) Y(0.0)KPES(0.99)EELT(0.0)AER K:TMT10,s:Phosphorylated S P4HB 57514.7 3 5 2940.1 65.3 HUMAN 1 3.1236 5.3262 MTLERAVSMLEADHM-p Q99959;S358-p MTLERAVSMLEADHM 0.518663523779988 0.131743739580025 0.0873333333333333 0.165 5.26874458225518 11.6056192887939 0.0873333333333333 0.165 0.297252517724659 0.0690936397257938 1.15308678006274 2.2614863362662 Q99959 PKP2 Q99959.S358.p_PKP2 Q99959_S358s_1_1_358_358 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17396.17396.3 14.37 14.37 14.37 2 1 1 0 627.9659 1785.9189 S358s M359m TMT10 356 (R) AVsmLEADHMLPSR (I) AVS(0.99)M(0.99)LEADHM(0.0)LPS(0.0)R s:Phosphorylated S,m:Oxidized methionine PKP2 97926.6 4 19 257.1 399.17 HUMAN 1 5.2687 11.6056 MTMYRRRSPEEFNPK-p Q6ZT07;S471-p MTMYRRRSPEEFNPK 0.239762484850952 0.00172005316210418 0.202333333333333 0.870333333333333 11.8549734705832 43.8293644424517 0.202333333333333 0.870333333333333 0.0652383026148626 4.14060265014422e-05 2.30663706435466 11.9955050858469 Q6ZT07 TBC1D9 Q6ZT07.S471.p_TBC1D9 Q6ZT07_S471s _1_1_471_471 Q6ZT07 Q6ZT07 TBC1 domain family member 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9981.9981.2 10.47 10.47 99 1 1 1 0 628.7921 1176.6098 S471s Hydrogen 471 (R) sPEEFNPK (L) S(1.0)PEEFNPK K:TMT10-Lys-Only,s:Phosphorylated S TBC1D9 144424.4 2 2 4517.1 30.41 HUMAN 1 11.855 43.8294 MTPPRNRTLPDLSEV-p O75385;T660-p MTPPRNRTLPDLSEV 0.254208761634429 0.0732238506850055 -0.167666666666667 -0.235 11.3217973512103 15.0769443095197 -0.167666666666667 -0.235 0.0737598907655157 0.0310674472096508 -2.21258450762165 -2.89099626023742 O75385 ULK1 O75385.T660.p_ULK1 O75385_T660t _1_1_660_660 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21726.21726.5 23.8 23.8 3.527 2 1 1 0 724.5849 3538.9171 T660t TMT10 658 (R) NRtLPDLSEVGPFHGQPLGPGLRPGEDPK (G) NRT(0.99)LPDLS(0.0)EVGPFHGQPLGPGLRPGEDPK K:TMT10,t:Phosphorylated T ULK1 113656.3 3 17 351.1 351.01 HUMAN 1 -11.3218 -15.0769 MTPSHGGSPVGPPQL-p P55201-2;S932-p MTPSHGGSPVGPPQL 0.28461650176684 0.140953168621393 0.305 -0.177 10.2978322329897 11.2127318830128 0.305 -0.177 0.0933720247973437 0.075635696708321 2.03350493579041 -2.1924103008306 P55201 BRPF1 P55201.2.S932.p_BRPF1 P55201-2_S932s _1_1_932_932 P55201-2 P55201-2|P55201-3 Isoform 2 of Peregrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24418.24418.3 17.15 17.15 3.909 6 1 1 0 967.1345 2819.4382 S932s TMT10 922 (R) ESQMTPSHGGsPVGPPQLPIMSSLR (Q) ES(0.0)QMT(0.0)PS(0.0)HGGS(0.99)PVGPPQLPIMS(0.0)S(0.0)LR s:Phosphorylated S BRPF1 139837.6 4 9 723.1 237.03 HUMAN 1 10.2978 -11.2127 MTPTVPGSPKAPFLG-p Q9UPX8-3;S831-p MTPTVPGSPKAPFLG 0.511272956349633 0.415142787638217 0.095 0.086 5.38574731542867 5.07916814202578 0.095 0.086 0.289351187103754 0.310515429980612 1.17430208161993 1.11831741651461 Q9UPX8 SHANK2 Q9UPX8.3.S831.p_SHANK2 Q9UPX8-3_S831s _1_1_831_831 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6|Q9UPX8-4|E7EUA2|Q9UPX8-2|B7ZKU9|E7EX50 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28869.28869.5 19.7 19.7 1.103 3 1 1 0 575.3248 2792.6261 S831s TMT10 819 (R) QGIAVMTPTVPGsPKAPFLGIPR (G) QGIAVMT(0.0)PT(0.0)VPGS(0.99)PKAPFLGIPR K:TMT10,s:Phosphorylated S SHANK2 202341.2 18 8 86.1 628.23 HUMAN 1 5.3857 5.0792 MTPVPLFSKQRSGCR-p O14976;S589-p MTPVPLFSKQRSGCR 0.78149643092872 0.837405109853591 -0.0566666666666667 -0.021 2.0552216537643 1.08211770221055 -0.0566666666666667 -0.021 0.622985350899804 0.779449943276267 -0.52099683605134 -0.294322495146327 O14976 GAK O14976.S589.p_GAK O14976_S589s _1_1_589_589 O14976 O14976 Cyclin-G-associated kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.31051.31051.3 12.91 13.18 4.682 2 1 1 0 609.6792 1747.0592 S589s TMT10 579 (R) AVVMTPVPLFsK (Q) AVVMT(0.0)PVPLFS(0.99)K K:TMT10,s:Phosphorylated S GAK 144671.4 1 3 746.1 233.2 HUMAN 1 -2.0552 -1.0821 MTQYFKKSPSLTEAS-p Q6PJP8;S238-p MTQYFKKSPSLTEAS 0.340652587960436 0.0020346511457182 -0.142333333333333 -0.954333333333333 8.69911378571805 42.0745742654231 -0.142333333333333 -0.954333333333333 0.134923817785865 6.20215439778797e-05 -1.75627896029638 -11.1050064092107 Q6PJP8 DCLRE1A Q6PJP8.S238.p_DCLRE1A Q6PJP8_S238s _1_1_238_238 Q6PJP8 Q6PJP8 DNA cross-link repair 1A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10383.10383.3 9.44 9.44 1.272 4 1 1 0 648.6934 1864.0995 S238s TMT10 237 (K) KsPSLTEASEK (I) KS(0.99)PS(0.0)LT(0.0)EAS(0.0)EK K:TMT10,s:Phosphorylated S DCLRE1A 117995 4 2 2309.1 88.53 HUMAN 1 -8.6991 -42.0746 MTRQGLKSPQESLSD-p Q96JG6;S15-p MTRQGLKSPQESLSD 0.660057898152577 0.629402201544876 0.0893333333333333 0.05 3.38075520726781 2.73371092577861 0.0893333333333334 0.05 0.459118168505263 0.532879370270463 0.796741579170473 0.665698035112502 Q96JG6 VPS50 Q96JG6.S15.p_VPS50 Q96JG6_S15s _1_1_15_15 Q96JG6 Q96JG6|Q96JG6-2 Syndetin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25339.25339.5 19.47 14.92 3.54 4 1 1 0 768.4221 3758.1056 S15s TMT10 11 (R) QGLKsPQESLSDLGAIESLRVPGKEEFR (E) QGLKS(0.99)PQES(0.0)LS(0.0)DLGAIES(0.0)LRVPGKEEFR K:TMT10,s:Phosphorylated S VPS50 112027.8 2 1 1224.1 164.69 HUMAN 1 3.3808 2.7337 MTSERAPSPSSRMGQ-p Q9UQ35;S2426-p MTSERAPSPSSRMGQ 0.337362550356468 0.746582774456811 0.161 -0.042 8.79133308197734 1.75199072787095 0.161 -0.042 0.132089012014841 0.668037630929123 1.77224235811093 -0.45309982904222 Q9UQ35 SRRM2 Q9UQ35.S2426.p_SRRM2 Q9UQ35_S2426s _1_1_2426_2426 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4541.4541.2 9.02 4.78 7.434 5 1 1 0 807.879 1534.7845 S2426s TMT10 2419 (R) MTSERAPsPSSR (M) MT(0.0)S(0.0)ERAPS(0.99)PS(0.0)S(0.0)R s:Phosphorylated S SRRM2 300351.7 9 157 2.1 3310.34 HUMAN 1 8.7913 -1.752 MTVRRRCSGLLDAPR-p Q6P0Q8;S931-p MTVRRRCSGLLDAPR 0.532341299743931 0.180653291560709 -0.0986666666666667 -0.218 5.06726135820575 9.77482683168246 -0.0986666666666667 -0.218 0.311367919048352 0.105321568166548 -1.11636994600757 -1.9418499851222 Q6P0Q8 MAST2 Q6P0Q8.S931.p_MAST2 Q6P0Q8_S931s _1_1_931_931 Q6P0Q8 Q6P0Q8 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9243.9243.3 7.88 7.88 99 1 1 1 0 485.2445 1373.7521 S931s TMT10 929 (R) RCsGLLDAPR (F) RCS(1.0)GLLDAPR C:Carbamidomethylation,s:Phosphorylated S MAST2 197687.5 2 52 121.1 549.41 HUMAN 1 -5.0673 -9.7748 MVDSQQKSPVKRRRM-p F6QMI7;S1422-p MVDSQQKSPVKRRRM 0.0520154613962689 0.00191494073185135 -0.538666666666667 -1.33933333333333 27.9681477133067 42.6036113857587 -0.538666666666667 -1.33933333333333 0.00159655994248072 5.49084091824702e-05 -5.83697034560067 -11.3667661970241 F6QMI7 DST F6QMI7.S1422.p_DST F6QMI7_S1422s _1_1_1422_1422 F6QMI7 Q03001|F8W9J4|F6QMI7|E9PHM6|Q03001-14|Q03001-8|Q03001-9|Q03001-3|Q6P0N6 Dystonin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10699.10699.4 13.7 13.7 2.893 2 1 1 0 522.0397 2005.1719 S1422s TMT10 1414 (R) AMVDSQQKsPVK (R) AMVDS(0.0)QQKS(0.99)PVK K:TMT10,s:Phosphorylated S DST 636850.7 5 4 796.2 223.72 HUMAN 1 -27.9681 -42.6036 MVEIRGNSIIMLEAL-p A8MWD9;S66-p MVEIRGNSIIMLEAL 0.500500788227868 0.901639221964462 -0.0903333333333333 -0.015 5.54215535947314 0.627117862160988 -0.0903333333333333 -0.015 0.279115827389726 0.86554213379892 -1.20254869239473 -0.177521743998046 A8MWD9 NotFound A8MWD9.S66.p_NotFound A8MWD9_S66s _1_1_66_66 A8MWD9 P62308|A8MWD9|F5H013|Q49AN9 Putative small nuclear ribonucleoprotein G-like protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33984.33984.3 8.88 8.88 99 1 1 1 0 585.3088 1673.9458 S66s TMT10 64 (R) GNsIIMLEALERV (-) GNS(1.0)IIMLEALERV s:Phosphorylated S SNRPGP15 8601 1 1 6884.1 8.88 HUMAN 1 -5.5422 -0.6271 MVEKQDQSPSLRTGE-p P54278;S403-p MVEKQDQSPSLRTGE 0.202255091053404 0.672107023004881 -0.284333333333333 0.0526666666666667 13.4686149866091 2.35965328499783 -0.284333333333333 0.0526666666666667 0.0449923317564705 0.580810784164816 -2.59586168083952 0.586981860042549 P54278 PMS2 P54278.S403.p_PMS2 P54278_S403s _1_1_403_403 P54278 P54278|C9J167|P54278-3 Mismatch repair endonuclease PMS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6782.6782.3 9.78 9.78 2.205 3 1 1 0 790.7596 2290.297 S403s TMT10 400 (K) QDQsPSLRTGEEKK (D) QDQS(0.99)PS(0.0)LRT(0.0)GEEKK K:TMT10,s:Phosphorylated S PMS2 96993.1 1 1 1932.1 106.31 HUMAN 1 -13.4686 2.3597 MVIQGPSSPQGEAMV-p Q12888-2;S1119-p MVIQGPSSPQGEAMV 0.530430921697941 0.217488013651443 0.0913333333333333 0.145333333333333 5.09774909674161 8.71925003855871 0.0913333333333333 0.145333333333333 0.309189751572205 0.134299685653174 1.1219413381605 1.75915333807717 Q12888 TP53BP1 Q12888.2.S1119.p_TP53BP1 Q12888-2_S1119s _1_1_1119_1119 Q12888-2 Q12888|A6NNK5|Q12888-2|Q12888-3 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30229.30924.3 16.24 16.24 1.183 3 1 1 0 999.8301 2917.5051 S1119s TMT10 1112 (K) MVIQGPSsPQGEAMVTDVLEDQK (E) MVIQGPS(0.0)S(0.99)PQGEAMVT(0.0)DVLEDQK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 69 50 3.1 2297.07 HUMAN 1 5.0977 8.7193 MVKFPGGTPGRWEKI-p Q96KC8;T349-p MVKFPGGTPGRWEKI 0.102728705875057 0.00752314179680432 -0.358 -0.497333333333333 20.8895688568115 30.3620172692921 -0.358 -0.497333333333333 0.00814785167304697 0.000920022128263636 -4.072515929878 -6.53250946192825 Q96KC8 DNAJC1 Q96KC8.T349.p_DNAJC1 Q96KC8_T349t _1_1_349_349 Q96KC8 Q96KC8 DnaJ homolog subfamily C member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17007.17007.3 10.9 6.61 99 1 1 1 0 590.6432 1689.9477 T349t TMT10 345 (K) FPGGtPGRWEK (I) FPGGT(1.0)PGRWEK K:TMT10,t:Phosphorylated T DNAJC1 64224 1 1 1670.1 122.29 HUMAN 1 -20.8896 -30.362 MVLSRKQSVFSAPSL-p Q14573;S934-p MVLSRKQSVFSAPSL 0.448441133550211 0.00569623234866083 0.103 0.583666666666667 6.42902668984762 32.5113326131183 0.103 0.583666666666667 0.227560736669641 0.000560875847389884 1.36064854553901 7.22139008872287 Q14573 ITPR3 Q14573.S934.p_ITPR3 Q14573_S934s _1_1_934_934 Q14573 Q14573 Inositol 1,4,5-trisphosphate receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20576.20576.4 22.37 21.12 1.215 5 1 1 0 682.6087 2647.4456 S934s TMT10 932 (R) KQsVFSAPSLSAGASAAEPLDR (S) KQS(0.99)VFS(0.0)APS(0.0)LS(0.0)AGAS(0.0)AAEPLDR K:TMT10,s:Phosphorylated S ITPR3 307010.8 5 2 1377.1 148.68 HUMAN 1 6.429 32.5113 MVLTRGLSLEHQKSS-p Q765P7;S456-p MVLTRGLSLEHQKSS 0.138510590853094 0.00910024292117959 -0.281 -0.443 17.5829451249623 28.8702213608816 -0.281 -0.443 0.0174463864227828 0.00129711315514753 -3.37834776126625 -6.08644352133889 Q765P7 MTSS1L Q765P7.S456.p_MTSS1L Q765P7_S456s _1_1_456_456 Q765P7 Q765P7|A0A087WXN9 MTSS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10257.10257.2 12.44 12.44 99 1 1 1 0 725.3967 1369.8204 S456s TMT10 454 (R) GLsLEHQK (S) GLS(1.0)LEHQK K:TMT10,s:Phosphorylated S MTSS1L 80498.5 3 4 425.1 319.48 HUMAN 1 -17.5829 -28.8702 MVPPRPDSLTGLRSS-p Q99569;S382-p MVPPRPDSLTGLRSS 0.925499011716659 0.684329915204428 -0.017 0.039 0.663233717740532 2.25594105258291 -0.017 0.039 0.858374145811943 0.594847847970156 -0.187131180670098 0.564695765860036 Q99569 PKP4 Q99569.S382.p_PKP4 Q99569_S382s _1_1_382_382 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17775.17982.3 11.74 11.74 2.171 2 1 1 0 583.3103 1667.9464 S382s TMT10 375 (R) MVPPRPDsLTGLR (S) MVPPRPDS(0.99)LT(0.0)GLR s:Phosphorylated S PKP4 132664.7 2 13 122.1 546.31 HUMAN 1 -0.6632 2.2559 MVQPQGCSDEEDHAE-p Q86V15;S130-p MVQPQGCSDEEDHAE 0.731724827574726 0.0114866088005294 -0.0623333333333334 0.469333333333333 2.5741625578527 27.1467853527509 -0.0623333333333334 0.469333333333333 0.552819996941557 0.00192895219507889 -0.632508441606839 5.60107196758953 Q86V15 CASZ1 Q86V15.S130.p_CASZ1 Q86V15_S130s _1_1_130_130 Q86V15 Q86V15|Q86V15-2 Zinc finger protein castor homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23749.23955.5 22.18 18.96 5.199 3 1 1 0 985.4592 4843.3169 S130s TMT10 112 (R) EGLELPPEGVYMVQPQGCsDEEDHAEEPSKDGGALEEK (D) EGLELPPEGVY(0.0)MVQPQGCS(0.99)DEEDHAEEPS(0.0)KDGGALEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CASZ1 193374.5 5 2 530.1 281.17 HUMAN 1 -2.5742 27.1468 MVSQNDGSFISKKEW-p Q15223;S508-p MVSQNDGSFISKKEW 0.0739675877414513 0.00259997565261951 -0.361 -0.769666666666667 24.2717218183045 39.4214898202846 -0.361 -0.769666666666667 0.00373962296545703 0.000114248634470404 -4.86165973197069 -9.87417307724631 Q15223 PVRL1 Q15223.S508.p_PVRL1 Q15223_S508s _1_1_508_508 Q15223 Q15223 Nectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29291.29291.5 23.61 21.58 2.266 6 1 1 0 812.4048 3978.041 S508s TMT10 485 (R) TLGYQYDPEQLDLAENMVSQNDGsFISKK (E) T(0.0)LGY(0.0)QY(0.0)DPEQLDLAENMVS(0.0)QNDGS(0.99)FIS(0.0)KK K:TMT10,s:Phosphorylated S NECTIN1 57499.4 6 5 885.1 206.68 HUMAN 1 -24.2717 -39.4215 MVVDAANSNGPFQPV-p Q13362;S18-p MVVDAANSNGPFQPV 0.132946954128706 0.990663777453489 0.273 -0.00233333333333328 18.0686241509454 0.0590301361625594 0.273 -0.00233333333333328 0.0156004664881388 0.986499765571063 3.47616681007787 -0.0177150825279329 Q13362 PPP2R5C Q13362.S18.p_PPP2R5C Q13362_S18s _1_1_18_18 Q13362 Q13362|Q13362-3 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31240.31240.3 15.77 15.77 99 1 1 1 0 862.7864 2506.3802 S18s TMT10 11 (R) MVVDAANsNGPFQPVVLLHIR (D) MVVDAANS(1.0)NGPFQPVVLLHIR s:Phosphorylated S PPP2R5C 61459 1 1 2426.2 83.98 HUMAN 1 18.0686 -0.059 MVVRRRKSLGGKVVT-p Q8TDM6;S711-p MVVRRRKSLGGKVVT 0.73696254035752 0.0335797701165508 -0.0476666666666667 -0.354333333333333 2.51035827247177 19.8660161691317 -0.0476666666666667 -0.354333333333333 0.561001694128681 0.010313317385665 -0.619076642205372 -3.84668605806457 Q8TDM6 DLG5 Q8TDM6.S711.p_DLG5 Q8TDM6_S711sT718t_2_2_711_718 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23138.23138.4 12.55 12.55 3.191 3 2 2 0 674.6283 2535.559 S711s T718t TMT10 711 (K) sLGGKVVtPLHINLSGQK (D) S(0.99)LGGKVVT(0.99)PLHINLS(0.0)GQK K:TMT10,s:Phosphorylated S,t:Phosphorylated T DLG5 215575.4 1 42 34.1 890.58 HUMAN 1 -2.5104 -19.866 MVYMNDKSPLTPEKE-p Q14289;S839-p MVYMNDKSPLTPEKE 0.0499167591004882 0.0311836516544318 -0.495666666666667 -0.404 28.7898707698295 20.3463382260085 -0.495666666666667 -0.404 0.00132133495170214 0.00923349625541148 -6.07222304189198 -3.94989761397321 Q14289 PTK2B Q14289.S839.p_PTK2B Q14289_S839s _1_1_839_839 Q14289 Q14289|Q14289-2 Protein-tyrosine kinase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26187.26187.4 14.14 11.81 2.862 4 1 1 0 708.8707 2752.4868 S839s TMT10 828 (K) SLDPMVYMNDKsPLTPEK (E) S(0.0)LDPMVY(0.0)MNDKS(0.99)PLT(0.0)PEK K:TMT10,s:Phosphorylated S PTK2B 117184.8 1 17 979.2 192.68 HUMAN 1 -28.7899 -20.3463 MWKSPNGTIRNILGG-p P48735;T138-p MWKSPNGTIRNILGG 0.711082879092597 0.0168222861259471 -0.053 0.541 2.78498490732415 24.4847432607029 -0.053 0.541 0.526625045027049 0.00356062038522481 -0.676391393194868 4.90848821127261 P48735 IDH2 P48735.T138.p_IDH2 P48735_T138t _1_1_138_138 P48735 P48735|P48735-2 Isocitrate dehydrogenase [NADP], mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14226.14226.3 10.21 5.87 2.15 2 1 1 0 576.6413 1647.9405 T138t TMT10 131 (K) MWKSPNGtIR (N) MWKS(0.0)PNGT(0.99)IR K:TMT10,t:Phosphorylated T IDH2 51364.8 1 2 2889.1 66.75 HUMAN 1 -2.785 24.4847 MWPEGKLSITEVTKR-p O94832;S553-p MWPEGKLSITEVTKR 0.368197886393332 0.179082848987937 -0.232666666666667 0.143 8.04535276210342 9.8234221290963 -0.232666666666667 0.143 0.156842849458653 0.104149643350461 -1.64302721276628 1.95027552308955 O94832 MYO1D O94832.S553.p_MYO1D O94832_S553s _1_1_553_553 O94832 O94832|J3QRN6|K7EIG7 Unconventional myosin-Id HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25074.25074.3 11.28 11.28 1.124 3 1 1 0 834.121 2420.3826 S553s TMT10 545 (K) NMWPEGKLsITEVTK (R) NMWPEGKLS(0.99)IT(0.0)EVT(0.0)K K:TMT10,s:Phosphorylated S MYO1D 116998.8 1 20 296.8 379.15 HUMAN 1 -8.0454 9.8234 MWRIFTGSLLVEEKS-p Q8WXG6;S230-p MWRIFTGSLLVEEKS 0.0901040343669965 0.15680716685746 -0.358 -0.182666666666667 22.2429270575737 10.5800578793721 -0.358 -0.182666666666667 0.0059663303236386 0.0874972114205676 -4.37770268210873 -2.08179414813941 Q8WXG6 MADD Q8WXG6.S230.p_MADD Q8WXG6_S230s _1_1_230_230 Q8WXG6 Q8WXG6|Q8WXG6-2|A0A0A0MRB5|Q8WXG6-3|Q8WXG6-7|Q8WXG6-4|Q8WXG6-5|Q8WXG6-8|Q8WXG6-6 MAP kinase-activating death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29500.29500.2 12.37 9.14 1.118 2 1 1 0 887.4952 1694.014 S230s TMT10 226 (R) IFTGsLLVEEK (S) IFT(0.0)GS(0.99)LLVEEK K:TMT10,s:Phosphorylated S MADD 184612.2 3 2 546.1 275.73 HUMAN 1 -22.2429 -10.5801 MWTEVPKSGKGKKKS-p P62316;S80-p MWTEVPKSGKGKKKS 0.735321298360423 0.960885733033861 -0.0526666666666667 -0.00566666666666664 2.52737990399837 0.249679651902021 -0.0526666666666667 -0.00566666666666664 0.558807221123672 0.944130515499166 -0.62266707728914 -0.0733856257954096 P62316 SNRPD2 P62316.S80.p_SNRPD2 P62316_S80s _1_1_80_80 P62316 P62316|P62316-2|K7EJB5 Small nuclear ribonucleoprotein Sm D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17183.17183.3 13.25 13.25 3.444 2 1 1 0 687.0353 1979.1239 S80s TMT10 72 (K) EMWTEVPKsGK (G) EMWT(0.0)EVPKS(0.99)GK K:TMT10,s:Phosphorylated S SNRPD2 13640.8 2 3 3210.1 57.32 HUMAN 1 -2.5274 -0.2497 MYLVPKLSLIGKGKR-p Q9BUI4;S194-p MYLVPKLSLIGKGKR 0.934979371920407 0.00556995614729869 -0.018 -1.00166666666667 0.572786106579953 32.6722919341769 -0.018 -1.00166666666667 0.876438383841001 0.000540469021982432 -0.162992780799718 -7.27531255519342 Q9BUI4 POLR3C Q9BUI4.S194.p_POLR3C Q9BUI4_S194s _1_1_194_194 Q9BUI4 Q9BUI4|E9PHH9 DNA-directed RNA polymerase III subunit RPC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30895.30895.3 14.02 14.02 7.764 2 1 1 0 748.7745 2164.3382 S194s TMT10 186 (K) DMYLVPKLsLIGK (G) DMY(0.0)LVPKLS(0.99)LIGK K:TMT10,s:Phosphorylated S POLR3C 61009.9 1 1 3104.1 60.54 HUMAN 1 -0.5728 -32.6723 MYPEFRQSDEENEDP-p Q9UPX0-2;S892-p MYPEFRQSDEENEDP 0.834918238854484 0.933317640182237 -0.033 0.00866666666666669 1.51240350284178 0.422891623826693 -0.033 0.00866666666666669 0.705926767216986 0.90721628539417 -0.397891836733421 0.122101875555182 Q9UPX0 IGSF9B Q9UPX0.2.S892.p_IGSF9B Q9UPX0-2_S892s _1_1_892_892 Q9UPX0-2 Q9UPX0-2 Isoform 2 of Protein turtle homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.35750.35750.4 19.73 19.73 1.133 5 1 1 0 1160.5492 4559.2216 S892s TMT10 874 (R) IEGFPFAEETDMYPEFRQsDEENEDPLVPTSVAALK (S) IEGFPFAEET(0.0)DMY(0.0)PEFRQS(0.99)DEENEDPLVPT(0.0)S(0.0)VAALK K:TMT10,s:Phosphorylated S IGSF9B 157853.8 2 2 3627.1 46.63 HUMAN 1 -1.5124 0.4229 MYQKERETPPRFAQH-p P23246;T476-p MYQKERETPPRFAQH 0.407878856431238 0.0302350363028939 0.176666666666667 0.284333333333333 7.1886157795842 20.5568018191914 0.176666666666667 0.284333333333333 0.191046208030614 0.00879670074752386 1.49399069868605 3.99560569794095 P23246 SFPQ P23246.T476.p_SFPQ P23246_T476t _1_1_476_476 P23246 P23246|P23246-2 Splicing factor, proline- and glutamine-rich HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10983.10983.4 15.42 15.42 7.696 5 1 1 0 735.0942 2857.3855 T476t TMT10 473 (K) EREtPPRFAQHGTFEYEYSQR (W) ERET(0.99)PPRFAQHGT(0.0)FEY(0.0)EY(0.0)S(0.0)QR t:Phosphorylated T SFPQ 76262.2 1 7 1659.1 123.09 HUMAN 1 7.1886 20.5568 MYRGGPASPGGLQGL-p Q8NCD3;S473-p MYRGGPASPGGLQGL 0.181631387263731 0.0102907900139851 0.316 -0.677333333333333 14.5903004838209 27.9050504196892 0.316 -0.677333333333333 0.0347512116610617 0.0016199251871718 2.80195902257816 -5.81082651502708 Q8NCD3 HJURP Q8NCD3.S473.p_HJURP Q8NCD3_S473s _1_1_473_473 Q8NCD3 Q8NCD3|Q8NCD3-2|Q8NCD3-3 Holliday junction recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14789.14789.3 17.52 14.24 10.062 2 1 1 0 569.288 1625.8809 S473s TMT10 469 (R) GGPAsPGGLQGLETR (R) GGPAS(0.99)PGGLQGLET(0.0)R s:Phosphorylated S HJURP 84336.4 4 8 596.1 263.83 HUMAN 1 14.5903 -27.9051 MYSSWVKSPDRTGVN-p Q8IZD2;S1070-p MYSSWVKSPDRTGVN 0.336940767668124 0.963981196135181 0.182 0.00600000000000002 8.80499175884254 0.22725823461996 0.182 0.006 0.131674241136521 0.949017402961998 1.77460665578946 0.0669546925321583 Q8IZD2 KMT2E Q8IZD2.S1070.p_KMT2E Q8IZD2_S1070s _1_1_1070_1070 Q8IZD2 Q8IZD2|Q8IZD2-7|Q8IZD2-2 Histone-lysine N-methyltransferase 2E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13937.13937.3 14.54 7.93 1.945 4 1 1 0 691.3431 1992.046 S1070s TMT10 1070 (K) sPDRTGVNFSVNSNLR (D) S(0.99)PDRT(0.0)GVNFS(0.0)VNS(0.0)NLR s:Phosphorylated S KMT2E 207015.2 2 9 544.1 275.86 HUMAN 1 8.805 0.2273 NAEAVLQSPGLSGKV-p Q13045;S856-p NAEAVLQSPGLSGKV 0.904890980229907 0.464068440309145 0.0183333333333333 -0.077 0.853986244169885 4.44594022820443 0.0183333333333333 -0.077 0.82148828710369 0.359257610663395 0.236840418431003 -1.00128419850727 Q13045 FLII Q13045.S856.p_FLII Q13045_S856s _1_1_856_856 Q13045 Q13045|Q13045-3|Q13045-2 Protein flightless-1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17353.17353.2 16.88 16.88 4.338 2 1 1 0 955.0134 1829.0533 S856s TMT10 849 (R) NAEAVLQsPGLSGK (V) NAEAVLQS(0.99)PGLS(0.0)GK K:TMT10,s:Phosphorylated S FLII 146231.9 7 5 2583.1 77.55 HUMAN 1 0.854 -4.4459 NAEEESESEGEEN__-p Q9Y6E2;S414-p NAEEESESEGEEN__ 0.50556949003824 0.0874691243817156 -0.097 0.187333333333333 5.46922051107305 14.0085717837108 -0.097 0.187333333333333 0.283842843509601 0.039732219094695 -1.18939269065781 2.69287582330962 Q9Y6E2 BZW2 Q9Y6E2.S414.p_BZW2 Q9Y6E2_S412sS414s_2_2_412_414 Q9Y6E2 Q9Y6E2|B5MCH7|B5MCE7|E9PFD4 Basic leucine zipper and W2 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.32134.32736.3 20.75 20.75 99 2 2 2 0 1001.0967 2841.3467 S412s S414s TMT10 400 (K) KFVEWLQNAEEEsEsEGEEN (-) KFVEWLQNAEEES(1.0)ES(1.0)EGEEN K:TMT10,s:Phosphorylated S BZW2 48389.7 24 2 4081.1 37.96 HUMAN 1 -5.4692 14.0086 NAELQARSNIWVAGD-p O95831;S431-p NAELQARSNIWVAGD 0.164495596876669 0.0233904499092061 0.282 0.456 15.7006625813516 22.2522964524478 0.282 0.456 0.0269112420125745 0.00595347253921115 3.01092307019015 4.37516758209195 O95831 AIFM1 O95831.S431.p_AIFM1 O95831_S431s _1_1_431_431 O95831 O95831|O95831-3 Apoptosis-inducing factor 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30805.30805.3 25.51 25.51 18.432 2 1 1 0 790.0533 2288.1786 S431s TMT10 431 (R) sNIWVAGDAACFYDIK (L) S(0.99)NIWVAGDAACFY(0.0)DIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AIFM1 67184.7 1 10 1056.1 182.66 HUMAN 1 15.7007 22.2523 NAETPKSSPLPAKGR-p Q7L2J0;S217-p NAETPKSSPLPAKGR 0.133015503975615 0.0230934221680368 0.359666666666667 0.346333333333333 18.0585317781821 22.3420183038432 0.359666666666667 0.346333333333333 0.0156367618618845 0.00583174021872102 3.47412067426363 4.39583952857425 Q7L2J0 MEPCE Q7L2J0.S217.p_MEPCE Q7L2J0_S216sS217s_2_2_216_217 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16211.16211.4 9.25 9.25 2.288 4 2 2 0 601.0745 2241.3421 S216s S217s TMT10 208 (R) TLNAETPKssPLPAK (G) T(0.0)LNAET(0.0)PKS(0.99)S(0.99)PLPAK K:TMT10,s:Phosphorylated S MEPCE 74981.5 14 16 428.1 317.7 HUMAN 1 18.0585 22.342 NAFRKNPSDPKLAHL-p Q14739;S516-p NAFRKNPSDPKLAHL 0.0719549135296335 0.615969452794244 0.576666666666667 0.0596666666666667 24.6732345525674 2.86018693497001 0.576666666666667 0.0596666666666667 0.00340938891462227 0.51758455288895 4.96149036679778 0.691774224115849 Q14739 LBR Q14739.S516.p_LBR Q14739_S516s _1_1_516_516 Q14739 Q14739 Lamin-B receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10906.10906.5 8.4 4.64 99 1 1 1 0 469.6846 2264.426 S516s TMT10 513 (R) KNPsDPKLAHLK (T) KNPS(1.0)DPKLAHLK K:TMT10,s:Phosphorylated S LBR 71101.3 2 10 1716.1 119.76 HUMAN 1 24.6732 2.8602 NAGRKERSDALNSAI-p P35221;S361-p NAGRKERSDALNSAI 0.0969168325177751 0.91653764756607 -0.428333333333333 -0.012 21.5110455736297 0.532659128383702 -0.428333333333333 -0.012 0.0070614752720799 0.884573830983592 -4.21100454125043 -0.152144981597302 P35221 CTNNA1 P35221.S361.p_CTNNA1 P35221_S361s _1_1_361_361 P35221 P35221-2|G3XAM7 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11720.11720.3 11.89 11.89 6.366 2 1 1 0 619.6552 1776.9856 S361s TMT10 359 (K) ERsDALNSAIDK (M) ERS(0.99)DALNS(0.0)AIDK K:TMT10,s:Phosphorylated S CTNNA1 100754.2 1 8 169.1 491.55 HUMAN 1 -21.511 -0.5327 NAGRNSASPKHSLNG-p Q96Q15;S1158-p NAGRNSASPKHSLNG 0.109239458675055 0.0150101649525638 1.37966666666667 -0.861 20.1382692623865 25.2328998888274 1.37966666666667 -0.861 0.00968663808407718 0.00299716057440598 3.90868747238449 -5.09656749746232 Q96Q15 SMG1 Q96Q15.S1158.p_SMG1 Q96Q15_S1158s _1_1_1158_1158 Q96Q15 Q96Q15|Q96Q15-2 Serine/threonine-protein kinase SMG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4263.4263.3 11.36 7.8 2.097 4 1 1 0 674.6761 1942.0507 S1158s TMT10 1155 (R) NSAsPKHSLNGESR (K) NS(0.0)AS(0.99)PKHS(0.0)LNGES(0.0)R K:TMT10,s:Phosphorylated S SMG1 414601.1 1 1 1337.1 152.31 HUMAN 1 20.1383 -25.2329 NAGSEEISSEDDELV-p Q9NY61;S320-p NAGSEEISSEDDELV 0.827100734127918 0.0138875769761835 -0.0395 0.3895 1.58697898615682 25.7762320246386 -0.0395 0.3895 0.693908330621134 0.0026447023281458 -0.41526022134601 5.23629569253876 Q9NY61 AATF Q9NY61.S320.p_AATF Q9NY61_S316sS320s_2_2_316_320 Q9NY61 Q9NY61 Protein AATF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21485.21485.5 21.64 21.64 1.147 5 2 2 0 812.4035 3898.0627 S316s S320s TMT10 305 (R) YLVDGTKPNAGsEEIsSEDDELVEEKK (Q) Y(0.0)LVDGT(0.0)KPNAGS(0.99)EEIS(0.99)S(0.0)EDDELVEEKK K:TMT10,s:Phosphorylated S AATF 63245.9 10 5 2183.1 94.22 HUMAN 2 -1.587 25.7762 NAIKAECSIRLPKAA-p O94776;S496-p NAIKAECSIRLPKAA 0.213941118182198 0.190161428898168 -0.343 -0.413666666666667 12.9097512100098 9.47950811761542 -0.343 -0.413666666666667 0.0511711148591819 0.112732512990736 -2.49481722228722 -1.89068676257053 O94776 MTA2 O94776.S496.p_MTA2 O94776_S496s _1_1_496_496 O94776 O94776|O94776-2 Metastasis-associated protein MTA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19450.19450.5 15.51 15.51 15.507 2 1 1 0 630.7573 3069.7962 S496s TMT10 481 (R) RPYAPINANAIKAECsIRLPK (A) RPY(0.0)APINANAIKAECS(0.99)IRLPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MTA2 75763.5 1 4 2100.1 97.64 HUMAN 1 -12.9098 -9.4795 NAINLPLSPIPFELD-p Q9NVD7;S62-p NAINLPLSPIPFELD 0.642910629713767 0.15295985410381 0.114 0.186 3.58637147653372 10.7230659575521 0.114 0.186 0.43788780692931 0.0846629514162335 0.837189537199149 2.10673820681915 Q9NVD7 PARVA Q9NVD7.S62.p_PARVA Q9NVD7_S62s _1_1_62_62 Q9NVD7 J3KNQ4|Q9NVD7|Q9NVD7-2 Alpha-parvin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.37053.37053.4 28.99 24.9 9.749 3 1 1 0 1134.7853 4456.1625 S62s TMT10 45 (K) EVSELQEEGMNAINLPLsPIPFELDPEDTMLEENEVR (T) EVS(0.0)ELQEEGMNAINLPLS(0.99)PIPFELDPEDT(0.0)MLEENEVR s:Phosphorylated S PARVA 42300 3 3 2338.1 87.3 HUMAN 1 3.5864 10.7231 NAKAQRLSQETEALG-p Q02818;S369-p NAKAQRLSQETEALG 0.818397261728959 0.028031763585221 -0.045 0.315666666666667 1.67556433190778 21.0352421937328 -0.045 0.315666666666667 0.679897691844984 0.00787908490801044 -0.435691301972347 4.10063828713574 Q02818 NUCB1 Q02818.S369.p_NUCB1 Q02818_S369s _1_1_369_369 Q02818 Q02818 Nucleobindin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10326.10326.3 14.61 14.61 3.404 2 1 1 0 589.9697 1687.9289 S369s TMT10 365 (K) AQRLsQETEALGR (S) AQRLS(0.99)QET(0.0)EALGR s:Phosphorylated S NUCB1 53878.3 2 2 4828.1 26.21 HUMAN 1 -1.6756 21.0352 NAKGPQVSGELKGPG-p Q09666;S5430-p NAKGPQVSGELKGPG 0.0658837618616825 0.25877210657368 -0.432 -0.144333333333333 25.4689270877775 7.73498190834306 -0.432 -0.144333333333333 0.00283862021491277 0.168461944447629 -5.1635304441301 -1.5886645267361 Q09666 AHNAK Q09666.S5430.p_AHNAK Q09666_S5430s _1_1_5430_5430 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20456.20456.3 18.67 18.67 99 1 1 1 0 854.4843 2481.4644 S5430s TMT10 5426 (K) GPQVsGELKGPGVDVNLK (G) GPQVS(1.0)GELKGPGVDVNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 139 1.1 4313.36 HUMAN 1 -25.4689 -7.735 NALGPGLSPELGPLP-p Q8N1G4;S92-p NALGPGLSPELGPLP 0.963529162369171 0.76713806264453 -0.00700000000000001 0.054 0.310441332228741 1.59052154040539 -0.00700000000000001 0.054 0.931013260626436 0.6933425381242 -0.0906743612560184 0.416036477379321 Q8N1G4 LRRC47 Q8N1G4.S92.p_LRRC47 Q8N1G4_S92s _1_1_92_92 Q8N1G4 Q8N1G4 Leucine-rich repeat-containing protein 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30378.30378.3 15.53 15.53 99 1 1 1 0 694.382 2001.1694 S92s TMT10 85 (R) NALGPGLsPELGPLPALR (V) NALGPGLS(1.0)PELGPLPALR s:Phosphorylated S LRRC47 64042.3 2 1 814.1 220.85 HUMAN 1 -0.3104 1.5905 NALIKRGSMYMQQQQ-p O94826;S375-p NALIKRGSMYMQQQQ 0.28261582387228 0.0900258561704214 0.158 0.196333333333333 10.3733183374094 13.8384137251847 0.158 0.196333333333333 0.0917631189112601 0.0413198396498389 2.04664986835013 2.66172423786544 O94826 TOMM70A O94826.S375.p_TOMM70A O94826_S375s _1_1_375_375 O94826 O94826 Mitochondrial import receptor subunit TOM70 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22884.22884.5 24.96 21.41 2.899 5 1 1 0 883.8101 4335.0331 S375s TMT10 373 (K) RGsMYMQQQQPLLSTQDFNMAADIDPQNADVYHHR (G) RGS(0.99)MY(0.0)MQQQQPLLS(0.0)T(0.0)QDFNMAADIDPQNADVY(0.0)HHR s:Phosphorylated S TOMM70 68138.3 2 7 776.1 227.2 HUMAN 1 10.3733 13.8384 NAMGSLASQATKDGK-p Q5VWC4;S364-p NAMGSLASQATKDGK 0.909465039529785 0.391923390661678 0.0173333333333333 -0.088 0.808464687409492 5.40866659939304 0.0173333333333333 -0.088 0.830144187213939 0.287828198890057 0.225118778983772 -1.1781942186389 Q5VWC4 PSMD4 Q5VWC4.S364.p_PSMD4 Q5VWC4_S364s _1_1_364_364 Q5VWC4 Q5VWC4|P55036 26S proteasome non-ATPase regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14526.14526.3 12.88 12.88 3.969 3 1 1 0 572.9635 1636.9093 S364s TMT10 357 (R) NAMGSLAsQATK (D) NAMGS(0.0)LAS(0.99)QAT(0.0)K K:TMT10,s:Phosphorylated S PSMD4 41306.5 1 6 2823.1 69.24 HUMAN 1 0.8085 -5.4087 NAMGSQDSLLEITFR-p O75052;S374-p NAMGSQDSLLEITFR 0.549770638851566 0.0763884010467811 0.083 0.195666666666667 4.79450080999389 14.8226468994388 0.083 0.195666666666667 0.3315506769672 0.032940888578249 1.06626115487403 2.843425560439 O75052 NOS1AP O75052.S374.p_NOS1AP O75052_S374s_1_1_374_374 O75052 O75052|O75052-3|O75052-2 Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26609.26609.3 19.99 19.99 1.149 4 1 1 0 798.0514 2296.1805 M369m S374s TMT10 363 (K) LSGQNAmGSQDsLLEITFR (S) LS(0.0)GQNAM(1.0)GS(0.0)QDS(0.99)LLEIT(0.0)FR m:Oxidized methionine,s:Phosphorylated S NOS1AP 56491.1 3 7 1378.1 148.59 HUMAN 1 4.7945 14.8226 NANQARVSPSTSYTP-p Q9BTE3;S154-p NANQARVSPSTSYTP 0.981951466182646 0.721562554186546 -0.00366666666666667 -0.0526666666666667 0.157142864275485 1.95348093739622 -0.00366666666666666 -0.0526666666666667 0.964463315902762 0.637752113105575 -0.0466528381568481 -0.49841785970766 Q9BTE3 MCMBP Q9BTE3.S154.p_MCMBP Q9BTE3_S154s _1_1_154_154 Q9BTE3 Q9BTE3|Q9BTE3-2 Mini-chromosome maintenance complex-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10806.10806.2 16.54 12.14 1.419 8 1 1 0 1304.1235 2527.2738 S154s TMT10 143 (K) EAYVNANQARVsPSTSYTPSR (H) EAY(0.0)VNANQARVS(0.99)PS(0.0)T(0.0)S(0.0)Y(0.0)T(0.0)PS(0.0)R s:Phosphorylated S MCMBP 73834.6 5 1 2833.1 68.66 HUMAN 1 -0.1571 -1.9535 NAPKRDLSFLLDKKA-p O75151;S705-p NAPKRDLSFLLDKKA 0.22049700747315 0.145422766038352 0.199 -0.185666666666667 12.6418607325329 11.0305890119912 0.199 -0.185666666666667 0.0544269410923238 0.0788753135701796 2.4467279530208 -2.1604919908943 O75151 PHF2 O75151.S705.p_PHF2 O75151_S705s _1_1_705_705 O75151 O75151 Lysine-specific demethylase PHF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28071.28071.3 13.32 13.32 99 1 1 1 0 616.0283 1766.1031 S705s TMT10 703 (R) DLsFLLDKK (A) DLS(1.0)FLLDKK K:TMT10,s:Phosphorylated S PHF2 121742.7 3 7 376.2 336.84 HUMAN 1 12.6419 -11.0306 NAPKRPPSAFFLFCS-p P26583;S100-p NAPKRPPSAFFLFCS 0.0795983003173285 0.00358283671502026 0.375333333333333 0.635666666666667 23.4762643155644 36.440940289952 0.375333333333333 0.635666666666667 0.00449131554719946 0.000226937345718125 4.66792715343788 8.64011497099638 P26583 HMGB2 P26583.S100.p_HMGB2 P26583_S100s _1_1_100_100 P26583 P26583 High mobility group protein B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19292.19292.4 16.55 16.55 9.232 2 1 1 0 629.3286 2434.3218 S100s TMT10 97 (K) RPPsAFFLFCSEHRPK (I) RPPS(0.99)AFFLFCS(0.0)EHRPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HMGB2 24204.5 1 2 3060.1 61.77 HUMAN 1 23.4763 36.4409 NAPKRPPSGFFLFCS-p O15347;S98-p NAPKRPPSGFFLFCS 0.264618868737521 0.0401598712202149 -0.218 0.282333333333333 10.9550115662564 18.7217376001256 -0.218 0.282333333333333 0.0802599423363762 0.0134222783207602 -2.1482295870219 3.60672951419952 O15347 HMGB3 O15347.S98.p_HMGB3 O15347_S98s _1_1_98_98 O15347 O15347 High mobility group protein B3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26887.26887.4 16.52 16.52 7.53 2 1 1 0 628.3259 2430.3157 S98s TMT10 95 (K) RPPsGFFLFCSEFRPK (I) RPPS(0.99)GFFLFCS(0.0)EFRPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HMGB3 23150.7 1 1 5756.1 16.52 HUMAN 1 -10.955 18.7217 NAPTSHVTPSVKKRS-p O60271;T586-p NAPTSHVTPSVKKRS 0.379231264309477 0.147198805117803 0.171666666666667 -0.175333333333333 7.77984097345328 10.9539438749063 0.171666666666667 -0.175333333333333 0.166730826361943 0.0802796762690422 1.59694416259182 -2.14707931528299 O60271 SPAG9 O60271.T586.p_SPAG9 O60271_T586t _1_1_586_586 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-9|O60271-3|O60271-5 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10464.10464.3 11.63 11.63 3.231 5 1 1 0 647.0054 1859.0427 T586t TMT10 578 (K) YNAPTSHVtPSVK (K) Y(0.0)NAPT(0.0)S(0.0)HVT(0.99)PS(0.0)VK K:TMT10,t:Phosphorylated T SPAG9 147001.6 1 30 84.1 629.25 HUMAN 1 7.7798 -10.9539 NAQDQQGSL______-p Q8WVZ9;S683-p NAQDQQGSL______ 0.446255553665082 0.127430515739434 -0.140333333333333 0.226 6.46344142312621 11.7942170232425 -0.140333333333333 0.226 0.225764606418944 0.0661573799929018 -1.36672431751697 2.2947647945995 Q8WVZ9 KBTBD7 Q8WVZ9.S683.p_KBTBD7 Q8WVZ9_S683s _1_1_683_683 Q8WVZ9 Q8WVZ9 Kelch repeat and BTB domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7324.7324.2 8.28 8.28 99 1 1 1 0 635.2889 1189.601 S683s TMT10 676 (R) NAQDQQGsL (-) NAQDQQGS(1.0)L s:Phosphorylated S KBTBD7 78417.2 1 1 6094.1 14.02 HUMAN 1 -6.4634 11.7942 NAQFPRFSPVLGRAQ-p Q9NRG9;S495-p NAQFPRFSPVLGRAQ 0.902248402372467 0.590032621865128 0.0183333333333333 0.0536666666666667 0.877267928740629 3.09851471178447 0.0183333333333333 0.0536666666666667 0.817096230778265 0.489946352493857 0.242802558246985 0.740245820778801 Q9NRG9 AAAS Q9NRG9.S495.p_AAAS Q9NRG9_S495s _1_1_495_495 Q9NRG9 Q9NRG9|Q9NRG9-2|F8VZ44 Aladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.33322.33737.5 23.23 23.23 6.695 2 1 1 0 571.1125 2771.5711 S495s TMT10 479 (R) IAHIPLYFVNAQFPRFsPVLGR (A) IAHIPLY(0.0)FVNAQFPRFS(0.99)PVLGR s:Phosphorylated S AAAS 60428.8 36 1 3084.1 61.16 HUMAN 1 0.8773 3.0985 NARETPHSPGVEDAP-p Q9UHB6-4;S491-p NARETPHSPGVEDAP 0.404207161071059 0.0716180250991253 -0.121 -0.311 7.26560634386617 15.2186523441589 -0.121 -0.311 0.187689235618839 0.0300700926058128 -1.50743077444671 -2.91762307959177 Q9UHB6 LIMA1 Q9UHB6.4.S491.p_LIMA1 Q9UHB6-4_S491s _1_1_491_491 Q9UHB6-4 Q9UHB6|Q9UHB6-5|Q9UHB6-2|F8VQE1|Q9UHB6-3|F8VS07|Q9UHB6-4 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11874.12285.3 17.97 17.97 1.483 2 1 1 0 696.0256 2006.0959 S491s TMT10 487 (R) ETPHsPGVEDAPIAK (V) ET(0.0)PHS(0.99)PGVEDAPIAK K:TMT10,s:Phosphorylated S LIMA1 85678.4 14 20 42.1 822.82 HUMAN 1 -7.2656 -15.2187 NARKRKHSPSPPPPT-p Q92922;S328-p NARKRKHSPSPPPPT 0.628040181453444 0.664161789918498 -0.0726666666666667 0.0473333333333334 3.75195043010542 2.43352515309677 -0.0726666666666667 0.0473333333333334 0.421507160729968 0.571014957673072 -0.869407468924322 0.602728263651237 Q92922 SMARCC1 Q92922.S328.p_SMARCC1 Q92922_S328sS330s_2_2_328_330 Q92922 Q92922 SWI/SNF complex subunit SMARCC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4772.4772.3 13 13 12.917 5 2 2 0 668.645 1843.9864 S328s S330s Hydrogen 326 (R) KHsPsPPPPTPTESR (K) KHS(0.99)PS(0.99)PPPPT(0.0)PT(0.0)ES(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S SMARCC1 123378.3 14 4 2356.1 86.86 HUMAN 1 -3.752 2.4335 NARTAVPSPVEAAAA-p Q147X3;S152-p NARTAVPSPVEAAAA 0.807399255272832 0.171886114734958 0.0366666666666667 0.17 1.78665932498039 10.0536412401864 0.0366666666666667 0.17 0.662726089085451 0.0987724612867907 0.461020159327157 1.99022164537496 Q147X3 NAA30 Q147X3.S152.p_NAA30 Q147X3_S152s _1_1_152_152 Q147X3 Q147X3|Q147X3-2 N-alpha-acetyltransferase 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17296.17296.2 15.19 9.97 5.036 3 1 1 0 1031.0147 1981.0552 S152s TMT10 148 (R) TAVPsPVEAAAASDPAAAR (N) T(0.0)AVPS(0.99)PVEAAAAS(0.0)DPAAAR s:Phosphorylated S NAA30 39889.4 4 5 1035.1 185.79 HUMAN 1 1.7867 10.0536 NASANPPSGIEDETA-p Q6UN15;S62-p NASANPPSGIEDETA 0.440113558652617 0.151599623930871 -0.105666666666667 0.151666666666667 6.56779072560648 10.7728202516507 -0.105666666666667 0.151666666666667 0.220404738614524 0.0836985578104676 -1.38512427547814 2.11542416606014 Q6UN15 FIP1L1 Q6UN15.S62.p_FIP1L1 Q6UN15_S62s_1_1_62_62 Q6UN15 A0A0B4J203|Q6UN15 Pre-mRNA 3'-end-processing factor FIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17110.17110.5 25.02 21.11 3.2 3 1 1 0 935.6502 4593.2683 S62s N71n TMT10 42 (K) DLDENEVERPEEENASANPPsGIEDETAEnGVPKPK (V) DLDEN(0.0)EVERPEEEN(0.0)AS(0.0)AN(0.0)PPS(0.99)GIEDET(0.0)AEN(0.99)GVPKPK K:TMT10,s:Phosphorylated S,n:Deamidated FIP1L1 66639.3 3 4 404.1 326.66 HUMAN 1 -6.5678 10.7728 NASKHRIYEYVESRM-p Q8WWY3;Y205-p NASKHRIYEYVESRM 0.544479209239916 0.0240488908252975 0.0933333333333333 0.364333333333333 4.8747275221079 22.0661898677924 0.0933333333333334 0.364333333333333 0.325482203725892 0.00621413971177627 1.08105048097842 4.33248242309981 Q8WWY3 PRPF31 Q8WWY3.Y205.p_PRPF31 Q8WWY3_Y205y _1_1_205_205 Q8WWY3 Q8WWY3|E7EVX8|Q8WWY3-4|Q8WWY3-2|Q8WWY3-3 U4/U6 small nuclear ribonucleoprotein Prp31 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8300.8300.3 11.04 6.88 2.501 3 1 1 0 554.2726 1580.8383 Y205y TMT10 202 (K) HRIyEYVESR (M) HRIY(0.99)EY(0.0)VES(0.0)R y:Phosphorylated Y PRPF31 55683.3 2 1 321.1 11.04 HUMAN 1 4.8747 22.0662 NATNSSYSPTTGRAF-p Q13009;S358-p NATNSSYSPTTGRAF 0.7520041957642 0.423160718633893 0.0436666666666667 -0.0993333333333333 2.36038481217743 4.97272198852984 0.0436666666666667 -0.0993333333333333 0.580712960427431 0.318220241612819 0.587211225346562 -1.09883581383797 Q13009 TIAM1 Q13009.S358.p_TIAM1 Q13009_S358s _1_1_358_358 Q13009 Q13009|Q13009-2 T-lymphoma invasion and metastasis-inducing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5167.5167.2 8.92 8.92 1.184 8 1 1 0 876.3929 1671.8136 S358s TMT10 350 (R) SNATNSSYsPTTGR (A) S(0.0)NAT(0.0)NS(0.0)S(0.0)Y(0.0)S(0.99)PT(0.0)T(0.0)GR s:Phosphorylated S TIAM1 178817.2 3 5 1466.1 140.01 HUMAN 1 2.3604 -4.9727 NAVAGRASKDGGAEA-p Q8N3D4;S1218-p NAVAGRASKDGGAEA 0.0698543161258038 0.787283305048078 -0.518666666666667 0.0296666666666667 24.9362759666739 1.44239871024635 -0.518666666666667 0.0296666666666667 0.00320901984865543 0.717397946120634 -5.02765552271396 0.381402133257931 Q8N3D4 EHBP1L1 Q8N3D4.S1218.p_EHBP1L1 Q8N3D4_S1218s _1_1_1218_1218 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4862.4862.3 9.88 9.88 99 1 1 1 0 471.2659 1331.816 S1218s TMT10 1211 (R) NAVAGRAsK (D) NAVAGRAS(1.0)K K:TMT10,s:Phosphorylated S EHBP1L1 162650.3 1 12 593.1 264.13 HUMAN 1 -24.9363 1.4424 NAVALSASPQLKEAQ-p Q92547;S888-p NAVALSASPQLKEAQ 0.357290119673935 0.0275768935924478 0.196666666666667 -0.374333333333333 8.30579440316151 21.147051067114 0.196666666666667 -0.374333333333333 0.147713626193595 0.00767882717715507 1.68817049241472 -4.12541326057678 Q92547 TOPBP1 Q92547.S888.p_TOPBP1 Q92547_S888s _1_1_888_888 Q92547 Q92547 DNA topoisomerase 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17336.17336.3 15.04 15.04 1.248 2 1 1 0 579.6627 1657.0049 S888s TMT10 881 (R) NAVALSAsPQLK (E) NAVALS(0.0)AS(0.99)PQLK K:TMT10,s:Phosphorylated S TOPBP1 172786.5 3 10 1135.1 173.67 HUMAN 1 8.3058 -21.1471 NAVGCLKSEVKMQKG-p Q5BJF6-4;S134-p NAVGCLKSEVKMQKG 0.92648668397199 0.00184315572268208 -0.02 -0.798333333333333 0.655050494926701 42.9924970484003 -0.02 -0.798333333333334 0.859993067788894 5.02053842308363e-05 -0.184962890215687 -11.5628288570341 Q5BJF6 ODF2 Q5BJF6.4.S134.p_ODF2 Q5BJF6-4_S124sS134s_2_2_124_134 Q5BJF6-4 Q5BJF6|Q5BJF6-4|Q5BJF6-3|Q5BJF6-2|Q5BJF6-7|Q5BJF6-6|Q5BJF6-10|Q5BJF6-5|Q5BJF6-8 Isoform 4 of Outer dense fiber protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31010.31010.4 7.06 7.06 99 2 2 2 0 742.9017 2808.6497 S124s S134s TMT10 121 (K) KIDsLMNAVGCLKsEVK (M) KIDS(1.0)LMNAVGCLKS(1.0)EVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ODF2 96031.2 1 14 853.1 211.96 HUMAN 1 -0.6551 -42.9925 NAVIVAKSPASAKRA-p O60256;S189-p NAVIVAKSPASAKRA 0.771638354290043 0.204645128621604 -0.0493333333333333 -0.141333333333333 2.15863512644193 9.0648343675679 -0.0493333333333333 -0.141333333333333 0.608326152181884 0.124027092601291 -0.543653215171812 -1.81892727835033 O60256 PRPSAP2 O60256.S189.p_PRPSAP2 O60256_S189s _1_1_189_189 O60256 O60256|O60256-2|O60256-3|O60256-4 Phosphoribosyl pyrophosphate synthase-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13416.13416.3 15.97 15.97 1.327 2 1 1 0 675.0692 1943.2257 S189s TMT10 182 (R) NAVIVAKsPASAK (R) NAVIVAKS(0.99)PAS(0.0)AK K:TMT10,s:Phosphorylated S PRPSAP2 41324.4 3 2 2642.1 75.43 HUMAN 1 -2.1586 -9.0648 NAVIVAKSPDAAKRA-p Q14558;S177-p NAVIVAKSPDAAKRA 0.598680748085569 0.386420926382117 -0.0773333333333333 0.0846666666666667 4.11752528042222 5.48977458794285 -0.0773333333333333 0.0846666666666667 0.387478376985808 0.282502659859114 -0.939529037893124 1.19284139965447 Q14558 PRPSAP1 Q14558.S177.p_PRPSAP1 Q14558_S177s _1_1_177_177 Q14558 Q14558-2|B4DP31 Phosphoribosyl pyrophosphate synthase-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13846.13846.3 16.87 16.87 99 1 1 1 0 684.401 1971.2206 S177s TMT10 170 (R) NAVIVAKsPDAAK (R) NAVIVAKS(1.0)PDAAK K:TMT10,s:Phosphorylated S PRPSAP1 39678.3 2 1 3267.1 55.48 HUMAN 1 -4.1175 5.4898 NAVRHNLSLHKCFVR-p Q8IVH2;S520-p NAVRHNLSLHKCFVR 0.254504068269259 0.11863788974303 -0.177 -0.367333333333333 11.3111534188328 12.20758040077 -0.177 -0.367333333333333 0.0739408873442063 0.0601508764717358 -2.21071322137168 -2.36800290725159 Q8IVH2 FOXP4 Q8IVH2.S520.p_FOXP4 Q8IVH2_S520s_1_1_520_520 Q8IVH2 O15409-4|O15409-9|A0A0U1RQM2|A0A0U1RQY3|A0A0U1RQR8|A8MUV4|Q8IVH2|E9PFD3|Q8IVH2-2|Q9H334|Q9H334-7|B7ZBM3|G5E965|Q0PRL4|Q9H334-2 Forkhead box protein P4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17891.17891.4 7.7 3.26 6.087 1 1 1 0 740.6536 2878.635 N513n S520s Hydrogen 513 (K) nAVRHNLsLHKCFVRVENVK (G) N(0.99)AVRHN(0.0)LS(1.0)LHKCFVRVEN(0.0)VK K:TMT10-Lys-Only,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S FOXP4 73886.5 1 8 2736.1 72.25 HUMAN 1 -11.3112 -12.2076 NAWDTLPSPRTPRTT-p Q9P2G1;S304-p NAWDTLPSPRTPRTT 0.932151691896397 0.1582851473181 0.0176666666666667 -0.203666666666667 0.604319978700251 10.5309018868807 0.0176666666666667 -0.203666666666667 0.870097662892604 0.0884931819497837 0.171452003317646 -2.07322736558595 Q9P2G1 ANKIB1 Q9P2G1.S304.p_ANKIB1 Q9P2G1_S304s _1_1_304_304 Q9P2G1 Q9P2G1 Ankyrin repeat and IBR domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25011.25011.3 12.42 12.42 1.119 6 1 1 0 922.105 2684.334 S304s TMT10 284 (R) SGVQMPTPPPSGYNAWDTLPsPR (T) S(0.0)GVQMPT(0.0)PPPS(0.0)GY(0.0)NAWDT(0.0)LPS(0.99)PR s:Phosphorylated S ANKIB1 124110.4 1 3 1291.1 157.55 HUMAN 1 0.6043 -10.5309 NAYAINVSQKRKYRQ-p Q8WVK2;S132-p NAYAINVSQKRKYRQ 0.469994578421718 0.857613370752798 -0.0996666666666667 0.019 6.05543564573956 0.938964487730345 -0.0996666666666667 0.019 0.248002715086793 0.805570494915006 -1.29443297915669 0.258472197405794 Q8WVK2 SNRNP27 Q8WVK2.S132.p_SNRNP27 Q8WVK2_S132s _1_1_132_132 Q8WVK2 Q8WVK2 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16642.16642.3 15.23 15.23 7.926 3 1 1 0 820.7872 2380.3803 S132s TMT10 119 (K) KVDGSVNAYAINVsQK (R) KVDGS(0.0)VNAY(0.0)AINVS(0.99)QK K:TMT10,s:Phosphorylated S SNRNP27 18859.9 1 3 4128.1 37.02 HUMAN 1 -6.0554 0.939 NAYRKAASVIAKYPH-p P06746;S44-p NAYRKAASVIAKYPH 0.551727758849808 0.0593983863540228 -0.0913333333333333 0.222666666666667 4.76709806786489 16.3378699785022 -0.0913333333333333 0.222666666666667 0.333649280932268 0.0232387627497677 -1.06119947960365 3.13106609190501 P06746 POLB P06746.S44.p_POLB P06746_S44s _1_1_44_44 P06746 P06746|E5RIJ0 DNA polymerase beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13254.13254.2 11.15 3.78 99 1 1 1 0 599.3556 1117.7345 S44s TMT10 42 (K) AAsVIAK (Y) AAS(1.0)VIAK K:TMT10,s:Phosphorylated S POLB 38348.1 2 1 5317.1 20.65 HUMAN 1 -4.7671 16.3379 NCAKEAISDAALEAT-p Q14966;S885-p NCAKEAISDAALEAT 0.81047655836131 0.828567945056357 -0.035 -0.022 1.75296539518411 1.1414165862643 -0.035 -0.022 0.667887723110327 0.768879605429549 -0.453371806280092 -0.308953516364918 Q14966 ZNF638 Q14966.S885.p_ZNF638 Q14966_S885s _1_1_885_885 Q14966 Q14966|Q14966-3|Q14966-4 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.34734.34734.5 24.9 15.97 9.862 4 1 1 0 912.2542 4477.2755 S885s TMT10 882 (K) EAIsDAALEATENEPLNKETEEMCVMLVSNLPNK (G) EAIS(0.99)DAALEAT(0.0)ENEPLNKET(0.0)EEMCVMLVS(0.0)NLPNK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF638 222047.2 2 14 165.1 494.68 HUMAN 1 -1.753 -1.1414 NCAQGEGSMAKKVKR-p Q9C0C9;S381-p NCAQGEGSMAKKVKR 0.846277082913161 0.0170745445918476 -0.0276666666666667 -0.353 1.40317599052718 24.3860796645754 -0.0276666666666667 -0.353 0.723906374560829 0.00364243687118942 -0.372162265781936 -4.88404957855362 Q9C0C9 UBE2O Q9C0C9.S381.p_UBE2O Q9C0C9_S381s _1_1_381_381 Q9C0C9 Q9C0C9 (E3-independent) E2 ubiquitin-conjugating enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6809.6809.3 14.69 14.69 99 1 1 1 0 683.3473 1968.061 S381s TMT10 374 (K) NCAQGEGsMAKK (V) NCAQGEGS(1.0)MAKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UBE2O 142717.3 2 4 308.1 373.27 HUMAN 1 -1.4032 -24.3861 NCEINNRSAANIRAL-p E7ETA6;S588-p NCEINNRSAANIRAL 0.473206185348215 0.0660109393947331 0.169 -0.271333333333333 5.98563463537472 15.7015968453885 0.169 -0.271333333333333 0.252020887411443 0.0269054534284413 1.28200407634221 -3.00902396445567 E7ETA6 PCM1 E7ETA6.S588.p_PCM1 E7ETA6_S588s_1_1_588_588 E7ETA6 Q15154|E7ETA6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7950.7950.3 11.4 11.4 1.097 3 1 1 0 748.3528 2162.0934 N585n S588s TMT10 577 (R) TVNSNCEInNRsAANIR (A) T(0.0)VN(0.0)S(0.0)N(0.50)CEIN(0.50)N(0.0)RS(0.99)AAN(0.0)IR C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S PCM1 229381.8 1 18 13.1 1159.95 HUMAN 1 5.9856 -15.7016 NCEKLSLSTNCIEKI-p Q4LDG9;S56-p NCEKLSLSTNCIEKI 0.869664005402355 0.10638674308178 -0.0296666666666667 0.188333333333333 1.18495903575752 12.8543966401245 -0.0296666666666667 0.188333333333333 0.761209318976304 0.0518275090313919 -0.319650930202879 2.48351838589889 Q4LDG9 DNAL1 Q4LDG9.S56.p_DNAL1 Q4LDG9_S56s _1_1_56_56 Q4LDG9 Q4LDG9|Q4LDG9-3 Dynein light chain 1, axonemal HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20106.20106.2 13.76 9 1.115 3 1 1 0 851.9459 1622.9188 S56s TMT10 53 (K) LSLsTNCIEK (I) LS(0.0)LS(0.99)T(0.0)NCIEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DNAL1 21703.8 4 1 6129.1 13.76 HUMAN 1 -1.185 12.8544 NCGCLGASPNLEQLQ-p P54136;S38-p NCGCLGASPNLEQLQ 0.941601783060378 0.723227477652091 0.011 -0.0343333333333333 0.513401002974279 1.93693289539596 0.011 -0.0343333333333333 0.888505048266768 0.64018679302759 0.146931820931476 -0.494732852494214 P54136 RARS P54136.S38.p_RARS P54136_S38s _1_1_38_38 P54136 P54136|E5RJM9|E5RH09 Arginine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21793.21793.3 19.13 19.13 99 1 1 1 0 938.1175 2732.3748 S38s TMT10 31 (K) NCGCLGAsPNLEQLQEENLK (L) NCGCLGAS(1.0)PNLEQLQEENLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RARS 76176.4 2 1 2998.1 63.61 HUMAN 1 0.5134 -1.9369 NCKLRRLSKPPFQTN-p Q4LE39;S666-p NCKLRRLSKPPFQTN 0.702360190260937 0.042896865302032 0.0636666666666666 -0.337666666666667 2.884805511434 18.3243563737958 0.0636666666666667 -0.337666666666667 0.514658854283607 0.0147083637780782 0.69691628064785 -3.52525694434553 Q4LE39 ARID4B Q4LE39.S666.p_ARID4B Q4LE39_S666sS675s_2_2_666_675 Q4LE39 Q4LE39|Q4LE39-2|Q4LE39-3|Q4LE39-4 AT-rich interactive domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24291.24291.5 13.18 13.18 1.16 5 2 2 0 776.0127 3716.1227 S666s S675s TMT10 664 (R) RLsKPPFQTNPsPEMVSKLDLTDAK (N) RLS(0.99)KPPFQT(0.0)NPS(0.99)PEMVS(0.0)KLDLT(0.0)DAK K:TMT10,s:Phosphorylated S ARID4B 148890.9 1 20 191.1 463.89 HUMAN 1 2.8848 -18.3244 NCLRRRPSDENTIAP-p Q86W92-2;S788-p NCLRRRPSDENTIAP 0.424548536607815 0.00595004777315755 0.108666666666667 0.602 6.85866146640798 32.1419952769926 0.108666666666667 0.602 0.206126511532123 0.000610661404580472 1.43624925799203 7.09892329125839 Q86W92 PPFIBP1 Q86W92.2.S788.p_PPFIBP1 Q86W92-2_S788s _1_1_788_788 Q86W92-2 Q86W92|Q86W92-2|Q86W92-4|Q86W92-3 Isoform 2 of Liprin-beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10737.10737.3 16.61 16.61 1.18 3 1 1 0 737.0461 2129.1603 S788s TMT10 786 (R) RPsDENTIAPSEVQK (W) RPS(0.99)DENT(0.0)IAPS(0.0)EVQK K:TMT10,s:Phosphorylated S PPFIBP1 113749.6 5 15 449.1 309.07 HUMAN 1 6.8587 32.142 NCLSSGKSEGDDSGF-p Q9C0I3;S157-p NCLSSGKSEGDDSGF 0.703994675571739 0.539843708684489 0.0556666666666667 0.0643333333333333 2.8652504571448 3.60128983531777 0.0556666666666667 0.0643333333333334 0.516981442846623 0.436386208227038 0.692907687582921 0.839972728644724 Q9C0I3 CCSER1 Q9C0I3.S157.p_CCSER1 Q9C0I3_S157s _1_1_157_157 Q9C0I3 Q9C0I3|Q9C0I3-2|E7EUW0 Serine-rich coiled-coil domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19200.19200.4 12.01 12.01 1.134 6 1 1 0 865.1579 3377.6432 S157s TMT10 146 (K) NVFINCLSSGKsEGDDSGFTEDQTRR (S) NVFINCLS(0.0)S(0.0)GKS(0.99)EGDDS(0.0)GFT(0.0)EDQT(0.0)RR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCSER1 100307.3 1 2 1823.1 112.62 HUMAN 1 2.8653 3.6013 NCNCKYCSHPLLGQN-p Q8TF40;S614-p NCNCKYCSHPLLGQN 0.149285094777406 0.062582044320019 0.814 -0.408 16.6434882440285 16.0205995993177 0.814 -0.408 0.0216596370853463 0.0250000018073104 3.19274279562367 -3.06997392759294 Q8TF40 FNIP1 Q8TF40.S614.p_FNIP1 Q8TF40_S614s _1_1_614_614 Q8TF40 Q8TF40|Q8TF40-3|J3KNG8|A0A087WX11 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17812.17812.4 8.56 8.56 6.052 5 1 1 0 928.7006 3631.8175 S614s TMT10 612 (K) YCsHPLLGQNVENISQQEREDIQNSSK (E) Y(0.0)CS(0.99)HPLLGQNVENIS(0.0)QQEREDIQNS(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FNIP1 132549.9 1 14 310.1 372.19 HUMAN 1 16.6435 -16.0206 NCNSREQSDDETEES-p O94885;S248-p NCNSREQSDDETEES 0.319825102614354 0.0227931793304635 -0.160333333333333 0.354333333333333 9.27020918518704 22.4196576038158 -0.160333333333333 0.354333333333333 0.118298457392606 0.00572841191796035 -1.85514799700481 4.41377707692735 O94885 SASH1 O94885.S248.p_SASH1 O94885_S248s _1_1_248_248 O94885 O94885 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5367.5367.2 7.77 7.77 3.834 3 1 1 0 852.8577 1624.7387 S248s Hydrogen 246 (R) EQsDDETEESVK (F) EQS(0.99)DDET(0.0)EES(0.0)VK K:TMT10-Lys-Only,s:Phosphorylated S SASH1 137734.8 3 4 295.1 379.69 HUMAN 1 -9.2702 22.4197 NCRDEVVSPLPSALQ-p Q7L2J0;S330-p NCRDEVVSPLPSALQ 0.075039518939006 1 0.396 -1.85037170770859e-17 24.084325241063 4.82163733276644e-16 0.396 -3.20493781063927e-17 0.00390451841902378 1 4.81554059083411 -1.42511706034459e-16 Q7L2J0 MEPCE Q7L2J0.S330.p_MEPCE Q7L2J0_S330s _1_1_330_330 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27698.27698.5 27.69 26.27 1.508 13 1 1 0 1091.7407 5374.7063 S330s TMT10 311 (R) DAPQPYELNTAINCRDEVVsPLPSALQGPSGSLSAPPAASVISAPPSSSSR (H) DAPQPY(0.0)ELNT(0.0)AINCRDEVVS(0.99)PLPS(0.0)ALQGPS(0.0)GS(0.0)LS(0.0)APPAAS(0.0)VIS(0.0)APPS(0.0)S(0.0)S(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S MEPCE 74981.5 7 12 428.1 317.7 HUMAN 1 24.0843 0 NCTIQIATPGKGKKS-p Q15061;T321-p NCTIQIATPGKGKKS 0.147571881565505 0.650955139884726 0.351666666666667 -0.043 16.8698209700491 2.54499630526047 0.351666666666667 -0.043 0.0205597534805776 0.556545107736144 3.23703869891478 -0.626296925968877 Q15061 WDR43 Q15061.T321.p_WDR43 Q15061_T321t _1_1_321_321 Q15061 Q15061 WD repeat-containing protein 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16988.16988.4 9.84 9.84 5.362 4 1 1 0 624.8506 2416.4201 T321t TMT10 309 (K) KPLTSNCTIQIAtPGK (G) KPLT(0.0)S(0.0)NCT(0.0)IQIAT(0.99)PGK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T WDR43 75859.2 2 2 2318.1 87.99 HUMAN 1 16.8698 -2.545 NDAQSFDYDHDAFLG-p O43852-3;Y55-p NDAQSFDYDHDAFLG 0.210578226562875 0.0200527645560937 -0.443333333333333 0.478333333333333 13.060203517523 23.2666675467556 -0.443333333333333 0.478333333333333 0.0494287523319399 0.00471338858099868 -2.52192095535304 4.61250828354993 O43852 CALU O43852.3.Y55.p_CALU O43852-3_S52sY55y_2_2_52_55 O43852-3 O43852-3|O43852-4|O43852-2|O43852-6 Isoform 3 of Calumenin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19530.19530.3 11.18 11.18 99 2 2 2 0 1033.4459 2937.4055 N48n S52s Y55y TMT10 46 (K) VHnDAQsFDyDHDAFLGAEEAK (T) VHN(1.0)DAQS(1.0)FDY(1.0)DHDAFLGAEEAK K:TMT10,n:Deamidated,s:Phosphorylated S,y:Phosphorylated Y CALU 38164.4 1 2 3755.1 43.83 HUMAN 1 -13.0602 23.2667 NDAYGPPSNFLEIDV-p O60493;S26-p NDAYGPPSNFLEIDV 0.0472026506613805 0.0154757811099789 0.492666666666667 0.431 29.4564771507475 25.0328670761898 0.492666666666667 0.431 0.00113331930058324 0.00313843611256928 6.26844498143833 5.045797230333 O60493 SNX3 O60493.S26.p_SNX3 O60493_S26s _1_1_26_26 O60493 O60493|O60493-2|O60493-3 Sorting nexin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30165.30165.4 27.21 24.79 4.438 5 1 1 0 1023.7841 4012.1544 S26s TMT10 11 (R) LITKPQNLNDAYGPPsNFLEIDVSNPQTVGVGR (G) LIT(0.0)KPQNLNDAY(0.0)GPPS(0.99)NFLEIDVS(0.0)NPQT(0.0)VGVGR K:TMT10,s:Phosphorylated S SNX3 18819.1 3 1 3523.1 49.07 HUMAN 1 29.4565 25.0329 NDDIEVESDADKRAH-p P61244-2;S11-p NDDIEVESDADKRAH 0.10854647135141 0.19299872274489 0.335666666666667 0.152666666666667 20.2109762568931 9.39450591257214 0.335666666666667 0.152666666666667 0.00952582007656971 0.114960702428216 3.92437514542759 1.87597093129086 P61244 MAX P61244.2.S11.p_MAX P61244-2_S11s _1_1_11_11 P61244-2 P61244-2|G3V2R5|G3V563|Q6V3B1 Isoform 2 of Protein max HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.9257.9257.2 15.2 15.2 3.069 2 1 1 0 1029.9403 1978.9039 S11s Acetyl 2 (M) SDNDDIEVEsDADKR (A) S(0.0)DNDDIEVES(0.99)DADKR K:TMT10,s:Phosphorylated S MAX 17201.4 1 4 2871.1 67.78 HUMAN 1 20.211 9.3945 NDDIEVESDEEQPRF-p P61244;S11-p NDDIEVESDEEQPRF 0.856296769318185 0.0156926961434457 -0.0313333333333333 0.384333333333333 1.31153461826722 24.9431058792984 -0.0313333333333333 0.384333333333333 0.739343975110097 0.00320397716424923 -0.350295975574386 5.02313075248838 P61244 MAX P61244.S11.p_MAX P61244_S11s _1_1_11_11 P61244 P61244|P61244-4|P61244-3|P61244-5|P61244-6 Protein max HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15297.15297.3 18.29 18.29 2.34 3 1 1 0 992.4258 2895.2966 S11s Acetyl 2 (M) SDNDDIEVEsDEEQPRFQSAADK (R) S(0.0)DNDDIEVES(0.99)DEEQPRFQS(0.0)AADK K:TMT10,s:Phosphorylated S MAX 18274.5 2 1 2871.2 67.78 HUMAN 1 -1.3115 24.9431 NDENGNCSGEGIEFP-p Q9UPU5;S117-p NDENGNCSGEGIEFP 0.91140351910678 0.338172352645242 -0.0183333333333333 0.155 0.791108059987541 6.23813697689424 -0.0183333333333333 0.155 0.833468506133892 0.237786011498357 -0.220626788245815 1.32654951232509 Q9UPU5 USP24 Q9UPU5.S117.p_USP24 Q9UPU5_S117s_1_1_117_117 Q9UPU5 Q9UPU5 Ubiquitin carboxyl-terminal hydrolase 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26261.26261.4 14.39 9.57 0.547 8 1 1 0 1417.6407 5585.5716 N113n N115n S117s TMT10 86 (R) GGSTGGGGGFDPPPAYHEVVDAEKNDEnGnCsGEGIEFPTTNLYELESR (V) GGS(0.0)T(0.0)GGGGGFDPPPAY(0.0)HEVVDAEKN(0.33)DEN(0.33)GN(0.33)CS(0.99)GEGIEFPT(0.0)T(0.0)N(0.0)LY(0.0)ELES(0.0)R K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S USP24 297383.8 1 127 8.4 1346.57 HUMAN 1 -0.7911 6.2381 NDETKALTPASLQKE-p Q9UJX4;T232-p NDETKALTPASLQKE 0.357143599320454 0.0509179768383229 -0.144666666666667 0.24 8.31404367898051 17.2677409401587 -0.144666666666667 0.24 0.147433315494458 0.0187597007345155 -1.68959963263969 3.31298178792205 Q9UJX4 ANAPC5 Q9UJX4.T232.p_ANAPC5 Q9UJX4_T232t _1_1_232_232 Q9UJX4 Q9UJX4|F5H0F9|Q9UJX4-3|Q9UJX4-2 Anaphase-promoting complex subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16691.16691.2 11.08 8.46 2.701 2 1 1 0 733.922 1386.8721 T232t TMT10 230 (K) ALtPASLQK (E) ALT(0.99)PAS(0.0)LQK K:TMT10,t:Phosphorylated T ANAPC5 85760.1 4 3 3031.1 62.7 HUMAN 1 -8.314 17.2677 NDFPLDLSPVKKRTR-p Q96JM2-3;S688-p NDFPLDLSPVKKRTR 0.104822206086827 0.00106093798192059 -0.494666666666667 -1.12433333333333 20.6498947137151 50.4969433039843 -0.494666666666667 -1.12433333333333 0.00861014625563401 8.91878448324775e-06 -4.01983384964276 -16.0331839908817 Q96JM2 ZNF462 Q96JM2.3.S688.p_ZNF462 Q96JM2-3_S688s _1_1_688_688 Q96JM2-3 Q96JM2-3 Isoform 3 of Zinc finger protein 462 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26881.26881.3 20.74 15.53 99 1 1 1 0 775.4465 2244.3571 S688s TMT10 678 (R) KLANDFPLDLsPVK (K) KLANDFPLDLS(1.0)PVK K:TMT10,s:Phosphorylated S ZNF462 296246.7 10 2 736.1 235.26 HUMAN 1 -20.6499 -50.4969 NDFVGGRSPVPKTYD-p Q99959;S102-p NDFVGGRSPVPKTYD 0.196036533561212 0.4327885548442 0.264333333333333 0.0903333333333333 13.7884377980559 4.84565085125649 0.264333333333333 0.0903333333333334 0.0417980691564435 0.32766866737509 2.6541568538488 1.07548371623587 Q99959 PKP2 Q99959.S102.p_PKP2 Q99959_S102s _1_1_102_102 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27667.27667.5 22.36 22.36 6.246 6 1 1 0 709.1675 3461.8469 S102s TMT10 80 (R) TSSVPEYVYNLHLVENDFVGGRsPVPK (T) T(0.0)S(0.0)S(0.0)VPEY(0.0)VY(0.0)NLHLVENDFVGGRS(0.99)PVPK K:TMT10,s:Phosphorylated S PKP2 97926.6 2 4 257.1 399.17 HUMAN 1 13.7884 4.8457 NDIANFFSPLNPIRV-p P31942;S216-p NDIANFFSPLNPIRV 0.477167041935842 0.076730991464523 0.105666666666667 0.221 5.91361467254151 14.7948386298453 0.105666666666667 0.221 0.256235048110105 0.0331524888003944 1.26915944655811 2.83823974514583 P31942 HNRNPH3 P31942.S216.p_HNRNPH3 P31942_S216s _1_1_216_216 P31942 P31942|P31942-2|P31942-3|P31942-4|P31942-5|P31942-6 Heterogeneous nuclear ribonucleoprotein H3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.33952.33952.3 20.96 20.96 10.676 2 1 1 0 743.3707 2148.1287 S216s TMT10 206 (R) ATENDIANFFsPLNPIR (V) AT(0.0)ENDIANFFS(0.99)PLNPIR s:Phosphorylated S HNRNPH3 36982.9 3 2 1995.1 103.48 HUMAN 1 5.9136 14.7948 NDIFEANSDSDQQSE-p Q99549-2;S136-p NDIFEANSDSDQQSE 0.603510877638601 0.0139668836897806 0.0696666666666667 0.418666666666667 4.04959088807156 25.7398412456011 0.0696666666666667 0.418666666666667 0.393587150210526 0.00266695615212497 0.926597147785528 5.22685267457379 Q99549 MPHOSPH8 Q99549.2.S136.p_MPHOSPH8 Q99549-2_S136s _1_1_136_136 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20297.20297.4 14.24 14.24 2.678 7 1 1 0 1035.0236 4057.1019 S136s TMT10 125 (R) LSLNNDIFEANsDSDQQSETKEDTSPKK (K) LS(0.0)LNNDIFEANS(0.99)DS(0.0)DQQS(0.0)ET(0.0)KEDT(0.0)S(0.0)PKK K:TMT10,s:Phosphorylated S MPHOSPH8 98148.4 4 5 242.1 413.34 HUMAN 1 4.0496 25.7398 NDILGRHSRKRWERF-p P68400;S277-p NDILGRHSRKRWERF 0.905774300473971 0.411944189200086 0.0343333333333333 0.126 0.84415245305906 5.12388115182463 0.0343333333333333 0.126 0.823350502124526 0.307334903271982 0.234315485434158 1.12647976879131 P68400 CSNK2A1 P68400.S277.p_CSNK2A1 P68400_S277s _1_1_277_277 P68400 P68400|Q8NEV1|E7EU96|P68400-2 Casein kinase II subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12917.12917.3 10.4 10.4 99 1 1 1 0 508.5951 1443.8018 S277s TMT10 269 (R) FNDILGRHsR (K) FNDILGRHS(1.0)R s:Phosphorylated S CSNK2A1 45256.9 1 5 2696.1 73.72 HUMAN 1 0.8442 5.1239 NDISPESSPGVGRRR-p E7ETA6;S69-p NDISPESSPGVGRRR 0.506609842161293 0.143514428301879 0.0883333333333333 0.215166666666667 5.44705228808669 11.1063236229372 0.0883333333333333 0.215166666666667 0.285295401238414 0.0775117670523859 1.18538859145998 2.17375591427519 E7ETA6 PCM1 E7ETA6.S69.p_PCM1 E7ETA6_S68sS69s_2_2_68_69 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6|Q15154-3 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14060.14060.3 13.44 11.84 2.988 4 2 2 0 635.2841 1743.9075 S68s S69s TMT10 60 (R) VTNDISPEssPGVGR (R) VT(0.0)NDIS(0.0)PES(0.99)S(0.99)PGVGR s:Phosphorylated S PCM1 229381.8 1 58 13.1 1159.95 HUMAN 2 5.4471 11.1063 NDIVDSDSDAEDRGT-p P78316;S148-p NDIVDSDSDAEDRGT 0.936107507392066 0.959273532092304 0.013 -0.0053333333333333 0.559458175246916 0.260808145578739 0.013 -0.00533333333333331 0.879132190310348 0.941714343755944 0.159403144108779 -0.076566511298174 P78316 NOP14 P78316.S148.p_NOP14 P78316_S146sS148s_2_2_146_148 P78316 P78316|P78316-2|E9PFK5 Nucleolar protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21909.22528.5 19.99 19.99 1.175 5 2 2 0 836.9933 4021.0052 S146s S148s TMT10 140 (K) HNDIVDsDsDAEDRGTLSAELTAAHFGGGGGLLHK (K) HNDIVDS(0.99)DS(0.99)DAEDRGT(0.0)LS(0.0)AELT(0.0)AAHFGGGGGLLHK K:TMT10,s:Phosphorylated S NOP14 98351.3 15 4 2153.1 95.6 HUMAN 1 0.5595 -0.2608 NDIYNFFSPLNPMRV-p P55795;S310-p NDIYNFFSPLNPMRV 0.998180995519267 0.113931674968845 0.000333333333333324 0.173 0.0147547390802318 12.4409544422291 0.000333333333333326 0.173 0.996608360421893 0.0570038981933237 0.00445067582679967 2.40954618396124 P55795 HNRNPH2 P55795.S310.p_HNRNPH2 P55795_S310s _1_1_310_310 P55795 P55795 Heterogeneous nuclear ribonucleoprotein H2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34402.34402.3 20.12 20.12 5.978 3 1 1 0 780.031 2258.1113 S310s TMT10 300 (R) ATENDIYNFFsPLNPMR (V) AT(0.0)ENDIY(0.0)NFFS(0.99)PLNPMR s:Phosphorylated S HNRNPH2 49548 7 20 990.3 191.56 HUMAN 1 0.0148 12.441 NDLDDSLSVKNGDSS-p Q6ULP2;S411-p NDLDDSLSVKNGDSS 0.174313620736545 0.00501277669645696 -0.425333333333333 0.612666666666667 15.1137633045001 33.5391195926895 -0.425333333333333 0.612666666666667 0.0308051742371883 0.000442678103536629 -2.89981493418594 7.57158211285137 Q6ULP2 AFTPH Q6ULP2.S411.p_AFTPH Q6ULP2_S411s _1_1_411_411 Q6ULP2 Q6ULP2|Q6ULP2-4|Q6ULP2-2|Q6ULP2-5|Q6ULP2-3 Aftiphilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27501.27506.4 20.12 15.71 1.135 5 1 1 0 816.6398 3183.5734 S411s TMT10 390 (K) FTNFQSPNIDPTEENDLDDSLsVK (N) FT(0.0)NFQS(0.0)PNIDPT(0.0)EENDLDDS(0.0)LS(0.99)VK K:TMT10,s:Phosphorylated S AFTPH 102996.9 2 5 973.1 193.16 HUMAN 1 -15.1138 33.5391 NDLPVGRSVDEALRL-p P32119;S151-p NDLPVGRSVDEALRL 0.495901315517715 0.479021660601523 0.108666666666667 0.068 5.61052016433602 4.26407541678287 0.108666666666667 0.068 0.274756505130582 0.374621292855459 1.21485625571542 0.967111287316907 P32119 PRDX2 P32119.S151.p_PRDX2 P32119_S151s _1_1_151_151 P32119 P32119 Peroxiredoxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21824.21824.3 7.18 7.18 2.696 2 1 1 0 764.404 2211.2295 S151s TMT10 140 (R) QITVNDLPVGRsVDEALR (L) QIT(0.0)VNDLPVGRS(0.99)VDEALR s:Phosphorylated S PRDX2 22062.7 1 2 5443.1 19.27 HUMAN 1 5.6105 4.2641 NDMDDYDSEDDNDWR-p A0A0U1RRH6;S208-p NDMDDYDSEDDNDWR 0.527533183247732 0.14768045651152 0.0856666666666667 0.174666666666667 5.13794974973484 10.9354504466968 0.0856666666666667 0.174666666666667 0.306340928982524 0.0806222576269555 1.12927906184195 2.14384459734949 A0A0U1RRH6 NotFound A0A0U1RRH6.S208.p_NotFound A0A0U1RRH6_S208s _1_1_208_208 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31030.31030.5 25.54 25.54 4.868 4 1 1 0 903.0165 4431.0797 S208s TMT10 188 (R) NRPLLDFVSMEELNDMDDYDsEDDNDWRPTVVK (R) NRPLLDFVS(0.0)MEELNDMDDY(0.0)DS(0.99)EDDNDWRPT(0.0)VVK K:TMT10,s:Phosphorylated S PHF14 109152.4 12 5 126.1 543.2 HUMAN 1 5.1379 10.9355 NDPIILSSDDDDDND-p Q9GZR1;S336-p NDPIILSSDDDDDND 0.499640884227713 0.32572113538594 0.129666666666667 0.147333333333333 5.55476159438315 6.44679459669744 0.129666666666667 0.147333333333333 0.2783068145968 0.226631639373987 1.2048198949362 1.36343853873829 Q9GZR1 SENP6 Q9GZR1.S336.p_SENP6 Q9GZR1_S335sS336s_2_2_335_336 Q9GZR1 Q9GZR1|Q9GZR1-2|F8W6D9 Sentrin-specific protease 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19899.19899.3 11.67 11.67 3.448 6 2 2 0 1117.821 3191.525 S335s S336s TMT10 323 (K) TSLSDLNDPIILssDDDDDNDRTNRR (E) T(0.0)S(0.0)LS(0.0)DLNDPIILS(0.99)S(0.99)DDDDDNDRT(0.0)NRR s:Phosphorylated S SENP6 127627.2 1 4 1568.1 131.02 HUMAN 1 5.5548 6.4468 NDQACPRTDDEDEGR-p Q9Y4F1-2;T525-p NDQACPRTDDEDEGR 0.590876065472109 0.84387628026991 0.0796666666666666 0.0213333333333334 4.20899445627935 1.03530843668091 0.0796666666666667 0.0213333333333334 0.379402819836056 0.787896472922529 0.956874156868733 0.282683899261614 Q9Y4F1 FARP1 Q9Y4F1.2.T525.p_FARP1 Q9Y4F1-2_T525t _1_1_525_525 Q9Y4F1-2 Q9Y4F1-2|C9JME2 Isoform 2 of FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21208.21208.3 14.33 14.33 2.448 3 1 1 0 1036.1505 3026.4687 T525t TMT10 508 (K) QASPLISPLLNDQACPRtDDEDEGR (R) QAS(0.0)PLIS(0.0)PLLNDQACPRT(0.99)DDEDEGR C:Carbamidomethylation,t:Phosphorylated T FARP1 122909.6 4 35 147.2 514.5 HUMAN 1 4.209 1.0353 NDQPDYDSVASDEDT-p Q14161;S394-p NDQPDYDSVASDEDT 0.690001442222247 0.0167801058367106 0.058 0.352 3.01971846090157 24.5033383829585 0.058 0.352 0.498916829579797 0.00354540752145239 0.724414501918404 4.9131035417438 Q14161 GIT2 Q14161.S394.p_GIT2 Q14161_S394sS397sT401t_3_3_394_401 Q14161 Q14161|F8WAK2|Q14161-6|Q14161-7|Q14161-11|Q14161-2|F8W822|Q14161-3|Q14161-5|Q14161-4|F8VXI9|Q14161-8|Q14161-10 ARF GTPase-activating protein GIT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16932.16932.5 22.29 22.29 1.743 10 3 3 0 914.1812 4326.9646 S394s S397s T401t TMT10 375 (K) TINNQHSVESQDNDQPDYDsVAsDEDtDLETTASK (T) T(0.0)INNQHS(0.0)VES(0.0)QDNDQPDY(0.0)DS(0.99)VAS(0.99)DEDT(0.99)DLET(0.0)T(0.0)AS(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T GIT2 85168.8 3 19 474.1 301.74 HUMAN 1 3.0197 24.5033 NDQYKFYSVNVDYSK-p O00483;S66-p NDQYKFYSVNVDYSK 0.0842705885662381 0.0179083104600089 -0.48 -0.432 22.9812941346468 24.0554095721515 -0.48 -0.432 0.00503350595251935 0.00393060174647662 -4.55000670582434 -4.8027495628231 O00483 NDUFA4 O00483.S66.p_NDUFA4 O00483_S66s _1_1_66_66 O00483 O00483 Cytochrome c oxidase subunit NDUFA4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21887.21887.3 11.46 9.66 4.424 4 1 1 0 587.2957 1679.9045 S66s TMT10 64 (K) FYsVNVDYSK (L) FY(0.0)S(0.99)VNVDY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S NDUFA4 9426.7 1 1 6480.1 11.46 HUMAN 1 -22.9813 -24.0554 NDSEGDDTEETEDYR-p Q9NYF8;T402-p NDSEGDDTEETEDYR 0.623835990083763 0.0140943537235631 -0.0666666666666667 1.10366666666667 3.80785966691311 25.6694276500684 -0.0666666666666667 1.10366666666667 0.41611563419785 0.00271054882736027 -0.880218916078427 5.20861579107385 Q9NYF8 BCLAF1 Q9NYF8.T402.p_BCLAF1 Q9NYF8_T402t _1_1_402_402 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|A0A1W2PQ43 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11438.11438.4 18.12 15.52 3.446 4 1 1 0 787.6047 3067.4281 T402t TMT10 392 (K) QKFNDSEGDDtEETEDYRQFR (K) QKFNDS(0.0)EGDDT(0.99)EET(0.0)EDY(0.0)RQFR K:TMT10,t:Phosphorylated T BCLAF1 106234.3 6 18 10.1 1293.04 HUMAN 1 -3.8079 25.6694 NDSVDEETAESDTSP-p Q99590;T410-p NDSVDEETAESDTSP 0.814137925555095 0.020010656038501 0.0383333333333333 0.326 1.7159264839039 23.2919745528313 0.0383333333333333 0.325020132549256 0.673608178768113 0.00468600281029777 0.44493060530863 4.61853331991398 Q99590 SCAF11 Q99590.T410.p_SCAF11 Q99590_T410tS413s_2_2_410_413 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17634.18103.3 19.88 18.82 1.124 8 2 2 0 982.0913 2784.3311 T410t S413s TMT10 400 (K) SSSNDSVDEEtAEsDTSPVLEK (E) S(0.0)S(0.0)S(0.0)NDS(0.0)VDEET(0.99)AES(0.99)DT(0.0)S(0.0)PVLEK K:TMT10,t:Phosphorylated T,s:Phosphorylated S SCAF11 166418 2 28 120.1 549.85 HUMAN 1 1.7159 23.292 NDVCNNESLVSDTET-p Q70CQ2;S352-p NDVCNNESLVSDTET 0.570102693907937 1 -0.0963333333333333 0 4.49064162540565 9.64327466553287e-16 -0.0963333333333333 -3.20493781063927e-17 0.35557878158231 1 -1.00982903984695 -2.68455589675562e-16 Q70CQ2 USP34 Q70CQ2.S352.p_USP34 Q70CQ2_S352s _1_1_352_352 Q70CQ2 Q70CQ2|Q70CQ2-2|Q70CQ2-3 Ubiquitin carboxyl-terminal hydrolase 34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.31356.31356.4 20.32 18.19 1.331 8 1 1 0 1040.2635 4078.0803 S352s TMT10 331 (R) LAGLSQITNQLHTFNDVCNNEsLVSDTETSIAK (E) LAGLS(0.0)QIT(0.0)NQLHT(0.0)FNDVCNNES(0.99)LVS(0.0)DT(0.0)ET(0.0)S(0.0)IAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S USP34 409988.3 2 1 713.1 238.32 HUMAN 1 -4.4906 0 NDVSEEESEEEEEDS-p O75607;S151-p NDVSEEESEEEEEDS 0.295408715152096 0.824898780665274 -0.21 -0.0226666666666666 9.970772942551 1.17077378272499 -0.21 -0.0226666666666666 0.100675247452406 0.763699703035861 -1.97663315121787 -0.316151303938658 O75607 NPM3 O75607.S151.p_NPM3 O75607_S147sS151sS158s_3_3_147_158 O75607 O75607 Nucleoplasmin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27305.27305.4 30.22 30.22 3.312 5 3 3 0 1308.3237 4990.38 S147s S151s S158s TMT10 137 (R) HQIVTMSNDVsEEEsEEEEEDsDEEEVELCPILPAKK (Q) HQIVT(0.0)MS(0.0)NDVS(0.99)EEES(0.99)EEEEEDS(0.99)DEEEVELCPILPAKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NPM3 19628.6 8 3 2964.1 64.53 HUMAN 1 -9.9708 -1.1708 NEALDKGSPEKTLSA-p Q86VI3;S539-p NEALDKGSPEKTLSA 0.1560557092084 0.255195712400508 -0.358666666666667 0.381 16.2033572863779 7.81294870646175 -0.358666666666667 0.381 0.0239697923279077 0.165464613558613 -3.10733501006017 1.60219918287125 Q86VI3 IQGAP3 Q86VI3.S539.p_IQGAP3 Q86VI3_S539s _1_1_539_539 Q86VI3 Q86VI3|F2Z2E2 Ras GTPase-activating-like protein IQGAP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.33057.33057.4 18.77 18.77 8.352 2 1 1 0 663.3821 2570.5372 S539s TMT10 525 (R) VLAVSLINEALDKGsPEK (T) VLAVS(0.0)LINEALDKGS(0.99)PEK K:TMT10,s:Phosphorylated S IQGAP3 185380.1 2 1 1872.1 109.83 HUMAN 1 -16.2034 7.8129 NEDADLPSEETDGIA-p Q05513;S206-p NEDADLPSEETDGIA 0.886618540405748 0.0243141879697085 0.021 0.3 1.01909358202901 21.9941303317884 0.021 0.3 0.790843668114914 0.00631810685766614 0.278661017724876 4.31602470214781 Q05513 PRKCZ Q05513.S206.p_PRKCZ Q05513_S206s_1_1_206_206 Q05513 Q05513|Q05513-3 Protein kinase C zeta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21581.21581.4 12.22 11.26 1.159 8 1 1 0 1151.0342 4520.1121 N199n S206s TMT10 183 (K) HMDSVMPSQEPPVDDKnEDADLPsEETDGIAYISSSR (K) HMDS(0.0)VMPS(0.0)QEPPVDDKN(1.0)EDADLPS(0.99)EET(0.0)DGIAY(0.0)IS(0.0)S(0.0)S(0.0)R K:TMT10,n:Deamidated,s:Phosphorylated S PRKCZ 68571.6 1 1 859.1 210.7 HUMAN 1 1.0191 21.9941 NEDDNPPSPIGGDMM-p O60244;S986-p NEDDNPPSPIGGDMM 0.942896336607154 0.0230310190205807 0.011 0.316333333333333 0.502082796704476 22.3580661138753 0.011 0.316333333333333 0.890823613002324 0.00581023085866079 0.143851032489011 4.39954339813457 O60244 MED14 O60244.S986.p_MED14 O60244_S986s _1_1_986_986 O60244 O60244 Mediator of RNA polymerase II transcription subunit 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36414.36810.5 24.58 24.84 1.115 4 1 1 0 869.2218 4262.115 S986s TMT10 977 (R) SVNEDDNPPsPIGGDMMDSLISQLQPPPQQQPFPK (Q) S(0.0)VNEDDNPPS(0.99)PIGGDMMDS(0.0)LIS(0.0)QLQPPPQQQPFPK K:TMT10,s:Phosphorylated S MED14 162087.1 55 2 1597.1 128.88 HUMAN 1 0.5021 22.3581 NEDLGPASPLDSTFY-p P04626;S998-p NEDLGPASPLDSTFY 0.915196161002606 0.729961018828838 0.0156666666666667 -0.034 0.755096081801378 1.88332792360958 0.0156666666666667 -0.034 0.840408413990678 0.648137586571054 0.21126592013282 -0.482751423061557 P04626 ERBB2 P04626.S998.p_ERBB2 P04626_S998s _1_1_998_998 P04626 P04626-3|P04626-4|P04626-5|J3QLU9|B4DTR1 Receptor tyrosine-protein kinase erbB-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31566.31566.3 19.99 19.99 6.035 4 1 1 0 893.1082 2597.3449 S998s TMT10 986 (R) FVVIQNEDLGPAsPLDSTFYR (S) FVVIQNEDLGPAS(0.99)PLDS(0.0)T(0.0)FY(0.0)R s:Phosphorylated S ERBB2 141274.2 3 15 521.1 283.33 HUMAN 1 0.7551 -1.8833 NEEAKRKSPKKKEKC-p P38432;S184-p NEEAKRKSPKKKEKC 0.0941117272618255 0.00582930989626683 2.084 -1.99166666666667 21.8339071743447 32.2969103882634 2.084 -1.99166666666667 0.00655555224019207 0.000589262713306094 4.28405111122752 -7.150077794205 P38432 COIL P38432.S184.p_COIL P38432_S184s _1_1_184_184 P38432 P38432 Coilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6894.6894.5 16.82 16.82 5.469 3 1 1 0 612.7252 2979.6339 S184s TMT10 168 (K) ATCGTVGDDNEEAKRKsPK (K) AT(0.0)CGT(0.0)VGDDNEEAKRKS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S COIL 63291.8 2 4 395.1 330.42 HUMAN 1 21.8339 -32.2969 NEEDNEISMLQEKER-p P21583;S261-p NEEDNEISMLQEKER 0.254146058927925 0.696412832759987 -0.179666666666667 -0.0426666666666667 11.3241145315095 2.16001351545954 -0.179666666666667 -0.0426666666666667 0.0737205466372571 0.608133108735395 -2.21299191689839 -0.543888597486534 P21583 KITLG P21583.S261.p_KITLG P21583_S261s _1_1_261_261 P21583 P21583|P21583-2|P21583-3|S4R384 Kit ligand HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24866.24866.3 21.3 20.79 99 1 1 1 0 962.1422 2804.4388 S261s TMT10 247 (R) AVENIQINEEDNEIsMLQEK (E) AVENIQINEEDNEIS(1.0)MLQEK K:TMT10,s:Phosphorylated S KITLG 31183.3 3 1 5253.1 21.3 HUMAN 1 -11.3241 -2.16 NEEDSEGSSDEDEDE-p B5ME19;S181-p NEEDSEGSSDEDEDE 0.43276554026149 0.00604775327324358 -0.193 0.839666666666667 6.6994019874204 32.0315914891431 -0.193 0.839666666666667 0.213825650177469 0.000626384281635136 -1.40828557093957 7.06265332774445 B5ME19 EIF3CL B5ME19.S181.p_EIF3CL B5ME19_S181sS182s_2_2_181_182 B5ME19 B5ME19|Q99613|Q99613-2 Eukaryotic translation initiation factor 3 subunit C-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23266.23266.5 25.53 25.53 1.146 6 2 2 0 993.6177 4804.1444 S181s S182s TMT10 161 (K) QNPEQSADEDAEKNEEDSEGssDEDEDEDGVSAATFLK (K) QNPEQS(0.0)ADEDAEKNEEDS(0.0)EGS(0.99)S(0.99)DEDEDEDGVS(0.0)AAT(0.0)FLK K:TMT10,s:Phosphorylated S EIF3CL 106155.7 5 12 451.1 308.49 HUMAN 2 -6.6994 32.0316 NEEEDDDTLEELGGL-p Q14692;T708-p NEEEDDDTLEELGGL 0.954566881730103 0.115329682541498 -0.01 0.336666666666667 0.396713275824408 12.3762738611907 -0.01 0.336666666666667 0.912701306940509 0.0578592252294213 -0.114855453250275 2.39801753478883 Q14692 BMS1 Q14692.T708.p_BMS1 Q14692_T708t _1_1_708_708 Q14692 Q14692 Ribosome biogenesis protein BMS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.35925.35925.3 13.22 13.22 3.713 4 1 1 0 1094.5057 3201.516 T708t TMT10 692 (K) LIYGTVTEDNEEEDDDtLEELGGLFR (V) LIY(0.0)GT(0.0)VT(0.0)EDNEEEDDDT(0.99)LEELGGLFR t:Phosphorylated T BMS1 146660.4 1 6 1331.1 153.07 HUMAN 1 -0.3967 12.3763 NEEISSDSESESLAP-p O43818;S53-p NEEISSDSESESLAP 0.6162038915283 0.0205844296633268 -0.0943333333333334 0.345333333333333 3.90236312392321 23.075412406237 -0.0943333333333334 0.345333333333333 0.407158670518287 0.00492559567649811 -0.898419642533256 4.56714065612563 O43818 RRP9 O43818.S53.p_RRP9 O43818_S50sS51sS53s_3_3_50_53 O43818 O43818 U3 small nucleolar RNA-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22373.22373.5 13.68 13.68 2.868 6 3 3 0 1045.2782 4982.4606 S50s S51s S53s TMT10 45 (K) MNEEIssDsESESLAPRKPEEEEEEELEETAQEKK (L) MNEEIS(0.99)S(0.99)DS(0.99)ES(0.0)ES(0.0)LAPRKPEEEEEEELEET(0.0)AQEKK K:TMT10,s:Phosphorylated S RRP9 52467.3 6 3 3279.1 55.18 HUMAN 1 -3.9024 23.0754 NEEKLRRSLPNLSRT-p Q9P270;S413-p NEEKLRRSLPNLSRT 0.342628074928273 0.0196840171247489 0.230666666666667 0.465333333333333 8.63965263723902 23.4154717164286 0.230666666666667 0.465333333333333 0.136783822534219 0.00455462712612277 1.74598548589722 4.64800938348834 Q9P270 SLAIN2 Q9P270.S413.p_SLAIN2 Q9P270_S413s _1_1_413_413 Q9P270 Q9P270|D6RIF6 SLAIN motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13620.13620.2 11.61 3.12 4.482 2 1 1 0 548.2915 1015.6098 S413s TMT10 413 (R) sLPNLSR (T) S(0.99)LPNLS(0.0)R s:Phosphorylated S SLAIN2 62770.5 3 15 277.1 389.63 HUMAN 1 8.6397 23.4155 NEENGEVSEDQSQNK-p Q13523;S32-p NEENGEVSEDQSQNK 0.191011115230049 0.18198696968497 -0.228666666666667 0.135333333333333 14.0574829802866 9.73390165840703 -0.228666666666667 0.135333333333333 0.0392872564699534 0.106318743203529 -2.70347857607816 1.93475587208782 Q13523 PRPF4B Q13523.S32.p_PRPF4B Q13523_S32s _1_1_32_32 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9075.9075.2 19.98 19.98 4.758 3 1 1 0 1223.0664 2365.1519 S32s TMT10 23 (K) SINEENGEVsEDQSQNK (H) S(0.0)INEENGEVS(0.99)EDQS(0.0)QNK K:TMT10,s:Phosphorylated S PRPF4B 117327.1 3 2 70.1 666.55 HUMAN 1 -14.0575 9.7339 NEEQVNGSPLERRSE-p Q9UHF7-2;S991-p NEEQVNGSPLERRSE 0.769192567611738 0.725410031894108 0.0496666666666667 -0.0343333333333333 2.18391418335614 1.91946968850083 0.0496666666666667 -0.0343333333333333 0.604795542531201 0.642766199892957 0.549156632750075 -0.490837080849865 Q9UHF7 TRPS1 Q9UHF7.2.S991.p_TRPS1 Q9UHF7-2_S991s_1_1_991_991 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8140.8140.2 15.92 12.82 6.802 2 1 1 0 913.4125 1744.8663 N989n S991s TMT10 982 (R) GSNEEQVnGsPLER (R) GS(0.0)N(0.0)EEQVN(0.99)GS(0.99)PLER n:Deamidated,s:Phosphorylated S TRPS1 145246 13 31 14.1 1150.14 HUMAN 1 2.1839 -1.9195 NEERLFGSQEIMTEK-p Q92794;S473-p NEERLFGSQEIMTEK 0.834583820338347 0.575571225714174 0.04 0.11 1.51438998329753 3.23554885441516 0.04 0.11 0.705603947305033 0.474728291748687 0.398356531843345 0.76774929649456 Q92794 KAT6A Q92794.S473.p_KAT6A Q92794_S473s _1_1_473_473 Q92794 Q92794|A5PLL3 Histone acetyltransferase KAT6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25058.25058.3 10.84 10.7 4.092 2 1 1 0 607.6458 1740.9606 S473s TMT10 470 (R) LFGsQEIMTEK (D) LFGS(0.99)QEIMT(0.0)EK K:TMT10,s:Phosphorylated S KAT6A 227705.4 2 9 903.1 203.52 HUMAN 1 1.5144 3.2355 NEERNLLSVAYKNVV-p P63104;S45-p NEERNLLSVAYKNVV 0.664425582516381 0.00322715536260507 0.0736666666666666 0.684333333333333 3.32027272552699 37.3197757120574 0.0736666666666667 0.684333333333333 0.465556856857246 0.000185362735005809 0.784745323491676 8.98876804647365 P63104 YWHAZ P63104.S45.p_YWHAZ P63104_S45s _1_1_45_45 P63104 P62258|P31947|P61981|P31946|Q04917|P27348|P63104|P31946-2|P62258-2|P31947-2|A0A0J9YWE8|I3L3T1|B4DJF2 14-3-3 protein zeta/delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23550.23550.2 12.92 7.46 7.13 2 1 1 0 723.4127 1365.8506 S45s TMT10 42 (R) NLLsVAYK (N) NLLS(0.99)VAY(0.0)K K:TMT10,s:Phosphorylated S YWHAZ 27915.8 3 14 2349.1 87.09 HUMAN 1 3.3203 37.3198 NEEWETASESSDFTS-p P48634;S1325-p NEEWETASESSDFTS 0.675953190261373 0.0202590745510651 0.0723333333333333 0.4748 3.18750151440454 23.1862236640402 0.0723333333333333 0.4748 0.480009517526588 0.00480150774348978 0.758245334417953 4.59339054448715 P48634 PRRC2A P48634.S1325.p_PRRC2A P48634_S1306sS1325s_2_2_1306_1325 P48634 P48634|P48634-3|P48634-2 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14430.14835.4 23.78 23.78 1.12 9 2 2 0 1094.7296 4215.9703 S1306s S1325s TMT10 1301 (R) RAAAKsPDLSNQNSDQANEEWETAsESSDFTSER (R) RAAAKS(0.99)PDLS(0.0)NQNS(0.0)DQANEEWET(0.0)AS(0.99)ES(0.0)S(0.0)DFT(0.0)S(0.0)ER K:TMT10,s:Phosphorylated S PRRC2A 229315.4 7 41 36.1 882.05 HUMAN 3 3.1875 23.1862 NEGIQALSNSEEEKK-p Q8N3X1-2;S314-p NEGIQALSNSEEEKK 0.766667060694937 0.0626885973375675 -0.0716666666666667 0.300666666666667 2.21128342621452 16.0123067515009 -0.0716666666666667 0.300666666666667 0.600996104984686 0.0250477848865115 -0.555100023507463 3.06838349046803 Q8N3X1 FNBP4 Q8N3X1.2.S314.p_FNBP4 Q8N3X1-2_S314s_1_1_314_314 Q8N3X1-2 Q8N3X1-2 Isoform 2 of Formin-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16603.16603.3 19.98 19.98 3.342 2 1 1 0 772.3745 2234.1552 S314s N315n TMT10 305 (K) EVNEGIQALsnSEEEK (K) EVN(0.0)EGIQALS(0.99)N(0.99)S(0.0)EEEK K:TMT10,s:Phosphorylated S,n:Deamidated FNBP4 110905.5 1 7 405.1 325.34 HUMAN 1 -2.2113 16.0123 NEGMAPPTPPKNPEE-p O60229-6;T184-p NEGMAPPTPPKNPEE 0.573276533538498 0.0436572920674595 0.0803333333333333 -0.331333333333333 4.44694008564437 18.2154848934714 0.0803333333333333 -0.331333333333333 0.35917490985467 0.0150817421221017 1.00165518764295 -3.50309599962134 O60229 KALRN O60229.6.T184.p_KALRN O60229-6_T184t _1_1_184_184 O60229-6 J3QSW6|O60229|O60229-4|O60229-6|O60229-5 Isoform 6 of Kalirin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17800.17800.5 23.29 18.79 22.794 2 1 1 0 798.4106 3908.0704 T184t TMT10 167 (R) GSLKDPAGCLNEGMAPPtPPKNPEEEQK (A) GS(0.0)LKDPAGCLNEGMAPPT(0.99)PPKNPEEEQK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T KALRN 143044.5 7 5 450.2 308.79 HUMAN 1 4.4469 -18.2155 NEGVNADSIKQASEQ-p A0A087WTU7;S800-p NEGVNADSIKQASEQ 0.207422631751664 0.363702374721809 0.205666666666667 0.107 13.185250125581 5.82295052048831 0.205666666666667 0.107 0.0480258419659022 0.261640486472229 2.54450221110708 1.2526689179713 A0A087WTU7 NotFound A0A087WTU7.S800.p_NotFound A0A087WTU7_S781sS783sS800s_3_3_781_800 A0A087WTU7 A0A087WTU7|E9PDN5|A0A087WV90|P11532-4 Dystrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4140.4140.5 8.61 2.45 99 3 3 3 0 724.3325 3359.7993 S781s S783s M791m N793n N797n S800s Hydrogen 776 (R) KLQDAsRsAQALVEQmVnEGVnADsIK (Q) KLQDAS(1.0)RS(1.0)AQALVEQM(1.0)VN(1.0)EGVN(1.0)ADS(1.0)IK K:TMT10-Lys-Only,s:Phosphorylated S,m:Oxidized methionine,n:Deamidated DMD 428951.2 1 6 2745.1 71.99 HUMAN 1 13.1853 5.823 NEHKLIHSGEKPYKC-p P0CG00;S459-p NEHKLIHSGEKPYKC 0.670052006515001 0.885635217912888 0.0666666666666667 0.018 3.25716725865929 0.741413255957104 0.0666666666666667 0.018 0.472371050864562 0.843060369297736 0.772178914984586 0.207674816347032 P0CG00 NotFound P0CG00.S459.p_NotFound P0CG00_S459s_1_1_459_459 P0CG00 P0CG00 Putative zinc finger and SCAN domain-containing protein 5D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11743.11743.4 8.69 1.23 1.245 2 1 1 0 669.6178 2594.5022 N450n S459s Hydrogen 450 (K) nLNEHKLIHsGEKPYK (C) N(0.99)LN(0.0)EHKLIHS(0.99)GEKPY(0.0)K K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S ZSCAN5DP 57384 3 32 240.88 415.72 HUMAN 1 3.2572 0.7414 NEIPRPFSPPVTSNT-p Q0JRZ9;S488-p NEIPRPFSPPVTSNT 0.251704693334651 0.0289882203386904 0.181 0.291 11.4287865321995 20.8193686885547 0.181 0.291 0.0719650028254988 0.00828062526134133 2.23140714979527 4.05305167359955 Q0JRZ9 FCHO2 Q0JRZ9.S488.p_FCHO2 Q0JRZ9_S488s _1_1_488_488 Q0JRZ9 Q0JRZ9|Q0JRZ9-3 F-BAR domain only protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26321.26525.3 19.98 11.24 1.327 6 1 1 0 1098.2479 3212.7629 S488s TMT10 477 (K) LSGINEIPRPFsPPVTSNTSPPPAAPLAR (A) LS(0.0)GINEIPRPFS(0.99)PPVT(0.0)S(0.0)NT(0.0)S(0.0)PPPAAPLAR s:Phosphorylated S FCHO2 89436.3 7 6 864.1 210.2 HUMAN 1 11.4288 20.8194 NEITIPVTFESRAQL-p P04792;T184-p NEITIPVTFESRAQL 0.993785156043959 0.357108983053956 0.00166666666666667 -0.0973333333333333 0.0546308737244748 5.93188113464171 0.00166666666666666 -0.0973333333333333 0.987499564178168 0.255159584652044 0.0164044925914883 -1.2721198436484 P04792 HSPB1 P04792.T184.p_HSPB1 P04792_T184t _1_1_184_184 P04792 P04792|C9J3N8 Heat shock protein beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25600.25600.3 20.29 16.04 1.178 5 1 1 0 739.0442 2135.1546 T184t TMT10 172 (K) LATQSNEITIPVtFESR (A) LAT(0.0)QS(0.0)NEIT(0.0)IPVT(0.99)FES(0.0)R t:Phosphorylated T HSPB1 22839.1 7 15 357.1 346.69 HUMAN 1 0.0546 -5.9319 NEITRELSISKHLAQ-p Q96QT4;S1269-p NEITRELSISKHLAQ 0.839563064744646 0.0840254499088097 -0.0306666666666667 0.277333333333333 1.46659585771236 14.240285061269 -0.0306666666666667 0.277333333333333 0.71341200670566 0.0376679073793207 -0.387144348275307 2.73546767860105 Q96QT4 TRPM7 Q96QT4.S1269.p_TRPM7 Q96QT4_S1269s _1_1_1269_1269 Q96QT4 Q96QT4|H0YLN8 Transient receptor potential cation channel subfamily M member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14787.14787.3 11.85 11.85 2.416 3 1 1 0 688.7138 1984.1591 S1269s TMT10 1260 (K) VHNEITRELsISK (H) VHNEIT(0.0)RELS(0.99)IS(0.0)K K:TMT10,s:Phosphorylated S TRPM7 214804.2 1 3 965.1 193.95 HUMAN 1 -1.4666 14.2403 NEKAEENTDQASPQE-p Q9NU22;T4534-p NEKAEENTDQASPQE 0.430550536818263 0.308329663421775 -0.138333333333333 -0.109 6.7387757556136 6.75343330592443 -0.138333333333333 -0.109 0.211895836993596 0.211181888576119 -1.41520526369463 -1.41740230697782 Q9NU22 MDN1 Q9NU22.T4534.p_MDN1 Q9NU22_T4534tS4538s_2_2_4534_4538 Q9NU22 Q9NU22 Midasin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28233.28233.5 7.96 7.96 5.3 3 2 2 0 983.6725 4754.3935 T4534t S4538s TMT10 4514 (R) AILCAIQNLEERKNEKAEENtDQAsPQEDYAGFER (L) AILCAIQNLEERKNEKAEENT(0.99)DQAS(0.99)PQEDY(0.0)AGFER C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S MDN1 638399.7 1 9 905.1 202.58 HUMAN 1 -6.7388 -6.7534 NEKDLNESISEEDKQ-p Q8NEV8;S706-p NEKDLNESISEEDKQ 0.209461411369469 0.00504424682289455 -0.472333333333333 -0.532 13.1025879068011 33.4874495319731 -0.472333333333333 -0.532 0.0489487053200292 0.000447976308629446 -2.52956925399557 -7.55363991378673 Q8NEV8 EXPH5 Q8NEV8.S706.p_EXPH5 Q8NEV8_S706s _1_1_706_706 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13454.13454.2 12.46 6.69 1.133 2 1 1 0 908.9296 1736.8954 S706s TMT10 702 (K) DLNEsISEEDK (Q) DLNES(0.99)IS(0.0)EEDK K:TMT10,s:Phosphorylated S EXPH5 223884.5 2 8 129.1 537.25 HUMAN 1 -13.1026 -33.4874 NEKEKRDSLGNEESV-p Q9UPZ3;S695-p NEKEKRDSLGNEESV 0.142551392436685 0.328751203387295 -0.562 -0.0973333333333333 17.2817581191256 6.3972106447891 -0.562 -0.0973333333333333 0.018699250005517 0.229233948729619 -3.31833714213865 -1.35468566101211 Q9UPZ3 HPS5 Q9UPZ3.S695.p_HPS5 Q9UPZ3_S695s _1_1_695_695 Q9UPZ3 Q9UPZ3|Q9UPZ3-2 Hermansky-Pudlak syndrome 5 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8018.8018.4 14.32 10.37 2.221 2 1 1 0 594.0628 2293.2603 S695s TMT10 691 (K) EKRDsLGNEESVDK (T) EKRDS(0.99)LGNEES(0.0)VDK K:TMT10,s:Phosphorylated S HPS5 129386.8 5 4 2159.1 95.05 HUMAN 1 -17.2818 -6.3972 NEKENKFSNGTIEEK-p Q92628;S260-p NEKENKFSNGTIEEK 0.51013186818347 0.29495226677677 0.128333333333333 0.150333333333333 5.40143734229267 6.99994521517891 0.128333333333333 0.150333333333333 0.288307716114676 0.199528748470577 1.17714138960632 1.46060009635923 Q92628 KIAA0232 Q92628.S260.p_KIAA0232 Q92628_S260s_1_1_260_260 Q92628 Q92628 Uncharacterized protein KIAA0232 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17074.17074.5 10.15 10.15 10.151 3 1 1 0 665.3799 3241.9169 S260s N261n TMT10 256 (K) ENKFsnGTIEEKPALYKK (Q) EN(0.0)KFS(0.99)N(0.99)GT(0.0)IEEKPALY(0.0)KK K:TMT10,s:Phosphorylated S,n:Deamidated KIAA0232 157125.3 2 3 568.1 270.65 HUMAN 1 5.4014 6.9999 NEKETMQSLNDRLAS-p P05783;S86-p NEKETMQSLNDRLAS 0.194748055065004 0.199932790723877 0.211 0.253333333333333 13.8639449500256 9.19833573361116 0.211 0.253333333333333 0.0410776419409331 0.120272524446029 2.66797239051922 1.84202264381695 P05783 KRT18 P05783.S86.p_KRT18 P05783_S86s _1_1_86_86 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25589.25589.3 17 11.7 3.395 4 1 1 0 741.0227 2141.0858 S86s TMT10 82 (K) ETMQsLNDRLASYLDR (V) ET(0.0)MQS(0.99)LNDRLAS(0.0)Y(0.0)LDR s:Phosphorylated S KRT18 48057 5 16 89.1 623.62 HUMAN 1 13.8639 9.1983 NEKEVKEYAQVFREH-p P35221-2;Y419-p NEKEVKEYAQVFREH 0.197649293626488 0.0442350267295786 -0.568 0.500666666666667 13.7245932560103 18.1362671711601 -0.568 0.500666666666667 0.0424170708294394 0.015359365770671 -2.64249110932427 3.48701378354298 P35221 CTNNA1 P35221.2.Y419.p_CTNNA1 P35221-2_Y419y _1_1_419_419 P35221-2 P26232|P26232-5|P35221-2|P26232-2|P26232-3|G3XAM7|P26232-6|A0A0A0MRI5|P26232-4|P35221-3|A0A0A0MTJ6|A0A087WZL6 Isoform 2 of Catenin alpha-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11679.11679.4 18.87 18.87 99 1 1 1 0 508.2646 1950.0598 Y419y TMT10 418 (K) EyAQVFREHANK (L) EY(1.0)AQVFREHANK K:TMT10,y:Phosphorylated Y CTNNA1 103489.3 5 2 32.1 58.12 HUMAN 1 -13.7246 18.1363 NEKFRTKSPKPAESP-p Q5VUA4;S1037-p NEKFRTKSPKPAESP 0.498313435551679 0.121984850116728 -0.096 0.203333333333333 5.57253370473885 12.0510529409491 -0.096 0.203333333333333 0.277170260195543 0.0623583630166979 -1.2080204708344 2.34021969932703 Q5VUA4 ZNF318 Q5VUA4.S1037.p_ZNF318 Q5VUA4_S1037s _1_1_1037_1037 Q5VUA4 Q5VUA4|Q5VUA4-2 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7126.7126.2 13.66 6.35 10.15 4 1 1 0 1048.073 2015.174 S1037s TMT10 1037 (K) sPKPAESPQSATK (Q) S(0.99)PKPAES(0.0)PQS(0.0)AT(0.0)K K:TMT10,s:Phosphorylated S ZNF318 252762.4 6 17 37.1 870.88 HUMAN 1 -5.5725 12.0511 NEKLEPGSDVEVKDA-p Q9ULI0;S1347-p NEKLEPGSDVEVKDA 0.147244482670036 0.0126346536249017 -0.601 0.491 16.8887440916976 26.4671506485994 -0.601 0.491 0.0204703652047515 0.0022557186753851 -3.24075398722628 5.41793297610006 Q9ULI0 ATAD2B Q9ULI0.S1347.p_ATAD2B Q9ULI0_S1347s _1_1_1347_1347 Q9ULI0 Q9ULI0|Q9ULI0-2 ATPase family AAA domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19477.19477.4 15.97 15.97 99 1 1 1 0 628.5859 2431.3535 S1347s TMT10 1343 (K) LEPGsDVEVKDAELDK (E) LEPGS(1.0)DVEVKDAELDK K:TMT10,s:Phosphorylated S ATAD2B 166451.5 5 13 531.1 280.81 HUMAN 1 -16.8887 26.4672 NEKQIANSQDGYVWQ-p P10155;S19-p NEKQIANSQDGYVWQ 0.208993010347482 0.182001101907891 0.195666666666667 0.136333333333333 13.1208724580061 9.73325505992405 0.195666666666667 0.136333333333333 0.0487430559912999 0.106334573627071 2.5328704794479 1.93464379957731 P10155 TROVE2 P10155.S19.p_TROVE2 P10155_S19s _1_1_19_19 P10155 P10155|P10155-4|P10155-5|P10155-3|P10155-2 60 kDa SS-A/Ro ribonucleoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23085.23085.3 21.28 21.28 3.568 3 1 1 0 812.0393 2354.1397 S19s TMT10 15 (K) QIANsQDGYVWQVTDMNR (L) Q(0.0)IAN(0.0)S(0.99)QDGY(0.0)VWQVT(0.0)DM(0.0)N(0.0)R s:Phosphorylated S TROVE2 61411.3 7 1 4421.1 31.7 HUMAN 1 13.1209 9.7333 NEKQIVGTPVNSEDS-p Q5QJE6;T232-p NEKQIVGTPVNSEDS 0.932495418439431 0.329976906456142 0.017 -0.241333333333333 0.598514049203225 6.3756373326116 0.017 -0.241333333333333 0.871261643587495 0.230375487232437 0.169898061520668 -1.35087490024583 Q5QJE6 DNTTIP2 Q5QJE6.T232.p_DNTTIP2 Q5QJE6_T232t _1_1_232_232 Q5QJE6 Q5QJE6|J3KP30 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10407.10407.2 15.27 15.27 1.499 4 1 1 0 963.9547 1846.9344 T232t TMT10 228 (K) QIVGtPVNSEDSDTR (Q) QIVGT(0.99)PVNS(0.0)EDS(0.0)DT(0.0)R t:Phosphorylated T DNTTIP2 84866.9 1 9 448.1 309.47 HUMAN 1 0.5985 -6.3756 NEKQQNASESKLELR-p Q6PL18;S1233-p NEKQQNASESKLELR 0.611969897277982 0.00328103297215395 -0.182 -1.269 3.9543025645185 37.2046232888101 -0.182 -1.269 0.402318259283241 0.000190343333604503 -0.908384382156707 -8.94238416429125 Q6PL18 ATAD2 Q6PL18.S1233.p_ATAD2 Q6PL18_S1233s _1_1_1233_1233 Q6PL18 Q6PL18|A0A0B4J211 ATPase family AAA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10635.10635.2 13.48 10.82 2.184 2 1 1 0 971.0138 1861.0543 S1233s TMT10 1229 (K) QQNAsESKLELR (N) QQNAS(0.99)ES(0.0)KLELR K:TMT10,s:Phosphorylated S ATAD2 159920.6 3 18 266.1 395.28 HUMAN 1 -3.9543 -37.2046 NEKRVALSPAGVQNL-p Q13423;S75-p NEKRVALSPAGVQNL 0.157598656025864 0.107760339813292 0.465333333333333 0.184 16.0974631491619 12.7805411172602 0.465333333333333 0.184 0.0245614320733375 0.0527164174333201 3.08692665511532 2.47026772166733 Q13423 NNT Q13423.S75.p_NNT Q13423_S75s _1_1_75_75 Q13423 Q13423 NAD(P) transhydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26135.26135.3 15.71 15.71 99 1 1 1 0 612.0259 1754.094 S75s TMT10 72 (R) VALsPAGVQNLVK (Q) VALS(1.0)PAGVQNLVK K:TMT10,s:Phosphorylated S NNT 114635.3 3 1 4955.1 24.72 HUMAN 1 16.0975 12.7805 NEKSLKLSPVQKQKK-p Q92834;S518-p NEKSLKLSPVQKQKK 0.953559929465783 0.639434854695043 -0.0106666666666667 -0.064 0.406404972967533 2.64564750005503 -0.0106666666666667 -0.064 0.910666797540584 0.543795049968505 -0.11754664111823 -0.647387298347427 Q92834 RPGR Q92834.S518.p_RPGR Q92834_S518s _1_1_518_518 Q92834 Q92834-6|Q92834-2|Q92834-4|Q92834-3 X-linked retinitis pigmentosa GTPase regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15750.15750.2 11.56 11.56 4.308 2 1 1 0 884.0411 1687.1085 S518s TMT10 514 (K) SLKLsPVQK (Q) S(0.0)LKLS(0.99)PVQK K:TMT10,s:Phosphorylated S RPGR 114411.7 4 2 4792.1 26.55 HUMAN 1 -0.4064 -2.6456 NELAKFRSEHELDVA-p O94964-2;S549-p NELAKFRSEHELDVA 0.383617908533383 0.165962175276999 0.122 0.153 7.70222194988268 10.2562574512978 0.122 0.153 0.169737501440067 0.094270162318688 1.58345749813704 2.0254255814197 O94964 SOGA1 O94964.2.S549.p_SOGA1 O94964-2_S549s _1_1_549_549 O94964-2 O94964-2|O94964-4|X6R3R3 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24172.24172.4 22.35 21.86 4.247 6 1 1 0 993.7274 3891.9322 S549s TMT10 547 (K) FRsEHELDVALSEDSCSVLSEPSQEELAAAK (L) FRS(0.99)EHELDVALS(0.0)EDS(0.0)CS(0.0)VLS(0.0)EPS(0.0)QEELAAAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SOGA1 185623.3 2 6 215.1 433.51 HUMAN 1 7.7022 10.2563 NELKSPGSPPGPELP-p Q8TEW0;S695-p NELKSPGSPPGPELP 0.895812531296143 0.457001297161195 0.0206666666666667 -0.0786666666666666 0.935765016934343 4.53388383820349 0.0206666666666667 -0.0786666666666667 0.806164181688652 0.352055891287648 0.257687226696525 -1.01771243339254 Q8TEW0 PARD3 Q8TEW0.S695.p_PARD3 Q8TEW0_S695s _1_1_695_695 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11|Q8TEW0-4|Q8TEW0-6|Q5VWV2 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27510.27510.3 17.18 17.18 1.177 3 1 1 0 753.037 2177.1287 S695s TMT10 692 (K) SPGsPPGPELPIETALDDR (E) S(0.0)PGS(0.99)PPGPELPIET(0.0)ALDDR s:Phosphorylated S PARD3 151933.9 3 11 65.1 692.2 HUMAN 1 0.9358 -4.5339 NELLPPPSPSLGSFD-p Q15025;S77-p NELLPPPSPSLGSFD 0.0629683487287699 0.0439548734434433 -1.56833333333333 -0.410333333333333 26.06433672296 18.1755314145075 -1.56833333333333 -0.410333333333333 0.00247494941957295 0.015221128716255 -5.31849030663024 -3.49498045577417 Q15025 TNIP1 Q15025.S77.p_TNIP1 Q15025_S77s _1_1_77_77 Q15025 Q15025|Q15025-2|A0A0A0MRZ4|Q15025-3|Q15025-4|Q15025-6|Q15025-5|Q15025-8|Q15025-7|E7EMV7 TNFAIP3-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37242.37242.3 22.63 18.98 1.564 4 1 1 0 1011.526 2952.597 S77s TMT10 69 (K) DNELLPPPsPSLGSFDPLAELTGK (D) DNELLPPPS(0.99)PS(0.0)LGS(0.0)FDPLAELT(0.0)GK K:TMT10,s:Phosphorylated S TNIP1 72148.2 4 1 1578.1 130.12 HUMAN 1 -26.0643 -18.1755 NEMKTFNSPNLKDGR-p Q9Y6N7-2;S1059-p NEMKTFNSPNLKDGR 0.79813572883131 0.0143718535027194 0.044 -0.390666666666667 1.89016947274765 25.545575003201 0.044 -0.390666666666667 0.647117363091239 0.00278896137513756 0.484339526440254 -5.17664890522829 Q9Y6N7 ROBO1 Q9Y6N7.2.S1059.p_ROBO1 Q9Y6N7-2_S1059s _1_1_1059_1059 Q9Y6N7-2 Q9Y6N7-2|Q9Y6N7-3|Q9Y6N7-4|Q9Y6N7-5|A0A087WTM1|A0A0A0MSX4|A0A087WZ85 Isoform 2 of Roundabout homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14987.14987.2 11.6 8.74 3.918 2 1 1 0 729.8927 1378.8095 S1059s TMT10 1056 (K) TFNsPNLK (D) T(0.0)FNS(0.99)PNLK K:TMT10,s:Phosphorylated S ROBO1 182465.9 5 4 832.1 215.62 HUMAN 1 1.8902 -25.5456 NENQLLNSQDC____-p Q9UFW8;S164-p NENQLLNSQDC____ 0.739902386885637 0.0557146917873102 0.0636666666666667 0.329666666666667 2.48069767158666 16.7080157556521 0.0636666666666667 0.329666666666667 0.564846227903147 0.0213401970088253 0.612807679933721 3.20295675232655 Q9UFW8 CGGBP1 Q9UFW8.S164.p_CGGBP1 Q9UFW8_S164s_1_1_164_164 Q9UFW8 Q9UFW8 CGG triplet repeat-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24322.24322.3 15.34 15.34 1.551 3 1 1 0 851.6983 2472.1187 N163n S164s TMT10 149 (R) AYLPDGYENENQLLnsQDC (-) AY(0.0)LPDGY(0.0)EN(0.0)EN(0.0)QLLN(0.99)S(0.99)QDC C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S CGGBP1 19105.3 1 1 5921.1 15.34 HUMAN 1 2.4807 16.708 NENWKRHSYAGEQPE-p Q5T0W9;S388-p NENWKRHSYAGEQPE 0.633028990396982 0.097093822099526 0.0666666666666667 0.201333333333333 3.70065820603354 13.3904595334724 0.0666666666666667 0.201333333333333 0.42651487235802 0.0458093412602408 0.85945945489457 2.58020266695145 Q5T0W9 FAM83B Q5T0W9.S388.p_FAM83B Q5T0W9_S388s _1_1_388_388 Q5T0W9 Q5T0W9 Protein FAM83B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23140.23140.5 19.59 13.59 2.693 4 1 1 0 862.4462 4228.2092 S388s TMT10 374 (R) QFQPNQINENWKRHsYAGEQPETVPYLLLNR (A) QFQPNQINENWKRHS(0.99)Y(0.0)AGEQPET(0.0)VPY(0.0)LLLNR K:TMT10,s:Phosphorylated S FAM83B 115253.5 3 2 249.1 407.75 HUMAN 1 3.7007 13.3905 NEPIPERSPQNGESG-p Q9NUL3;S188-p NEPIPERSPQNGESG 0.25414491835742 0.215541018358196 -0.321333333333333 0.212333333333333 11.3261989993635 8.77068739002028 -0.321333333333333 0.212333333333333 0.0736851717374662 0.132718437781026 -2.21335841987153 1.76805023948036 Q9NUL3 STAU2 Q9NUL3.S188.p_STAU2 Q9NUL3_S188s _1_1_188_188 Q9NUL3 Q9NUL3|A0A0A0MTC5|Q9NUL3-2|E9PH62|E7EVJ4|Q9NUL3-7|A0A0A0MTC6|E7EPX0|Q9NUL3-3|F8VPI7|Q9NUL3-8|A0A0A0MTD1|Q9NUL3-6|A0A0A0MTC4|E7EVI1 Double-stranded RNA-binding protein Staufen homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16666.16666.3 20.51 20.51 4.508 2 1 1 0 967.8328 2821.5208 S188s TMT10 175 (K) ALQALQNEPIPERsPQNGESGK (D) ALQALQNEPIPERS(0.99)PQNGES(0.0)GK K:TMT10,s:Phosphorylated S STAU2 62867.6 2 3 1170.1 170.28 HUMAN 1 -11.3262 8.7707 NEPQQMVSPSNSLRA-p Q9H2Y7;S893-p NEPQQMVSPSNSLRA 0.840341988912357 0.0150086766164053 -0.03 -0.495666666666667 1.45916706148933 25.234235787472 -0.03 -0.495666666666667 0.714633373310663 0.00299623878350728 -0.385395598147241 -5.09690776524873 Q9H2Y7 ZNF106 Q9H2Y7.S893.p_ZNF106 Q9H2Y7_S893s _1_1_893_893 Q9H2Y7 Q9H2Y7|Q9H2Y7-2|A0A0C4DGM5 Zinc finger protein 106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26374.26374.4 20.24 20.24 1.541 8 1 1 0 960.9647 3760.8529 S893s TMT10 870 (R) APSVYSFFSEEGTGKENEPQQMVsPSNSLR (A) APS(0.0)VY(0.0)S(0.0)FFS(0.0)EEGT(0.0)GKENEPQQMVS(0.99)PS(0.0)NS(0.0)LR K:TMT10,s:Phosphorylated S ZNF106 210818.9 4 5 170.1 490.3 HUMAN 1 -1.4592 -25.2342 NEQFLDNSFEKVKRR-p O43303;S580-p NEQFLDNSFEKVKRR 0.545642581004852 0.0432023993303546 0.124666666666667 -0.272666666666667 4.85579791561425 18.2814263989082 0.124666666666667 -0.272666666666667 0.326903980274774 0.0148544768099958 1.07756485764166 -3.51651034958313 O43303 CCP110 O43303.S580.p_CCP110 O43303_S580s _1_1_580_580 O43303 O43303|O43303-2 Centriolar coiled-coil protein of 110 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23770.23770.3 17.14 17.14 2.352 3 1 1 0 1048.4703 3063.4262 S580s TMT10 562 (R) QQMDTPMVSCGNEQFLDNsFEK (V) Q(0.0)QM(0.0)DT(0.0)PM(0.0)VS(0.0)CGN(0.0)EQFLDN(0.0)S(0.99)FEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCP110 114220.9 2 8 1000.1 190.08 HUMAN 1 4.8558 -18.2814 NEQNFDGTSDEEHEQ-p Q6YBV0;T35-p NEQNFDGTSDEEHEQ 0.971689010406699 0.0731293901572789 0.00166666666666667 0.222666666666667 0.241863565934532 15.0851218341676 0.0075981309685062 0.222666666666667 0.945831216290823 0.0310090039665619 0.0711537088406893 2.89253049187611 Q6YBV0 SLC36A4 Q6YBV0.T35.p_SLC36A4 Q6YBV0_T35tS36s_2_2_35_36 Q6YBV0 Q6YBV0|E9PN09 Proton-coupled amino acid transporter 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27537.27742.5 15.12 9.72 6.067 2 2 2 0 961.4494 4642.2805 N31n T35t S36s TMT10 15 (R) REELDMDVMRPLINEQnFDGtsDEEHEQELLPVQK (H) REELDMDVMRPLIN(0.0)EQN(0.99)FDGT(1.0)S(1.0)DEEHEQELLPVQK K:TMT10,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S SLC36A4 56783.7 3 2 5503.1 18.73 HUMAN 1 0.2419 15.0851 NEQSPRVSPKSVVEK-p O75952;S343-p NEQSPRVSPKSVVEK 0.136768899098909 0.0134389710405779 -0.528 0.437 17.723386675708 26.0279164657052 -0.528 0.437 0.0168912322122821 0.00249579179963284 -3.40649889718281 5.30194171863939 O75952 CABYR O75952.S343.p_CABYR O75952_S343s _1_1_343_343 O75952 O75952|O75952-2|A0A0D9SFQ2|O75952-6 Calcium-binding tyrosine phosphorylation-regulated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6445.6445.3 9.64 6.44 2.591 2 1 1 0 603.649 1728.9645 S343s TMT10 335 (K) ENEQSPRVsPK (S) ENEQS(0.0)PRVS(0.99)PK K:TMT10,s:Phosphorylated S CABYR 52944.2 1 4 3236.1 56.25 HUMAN 1 -17.7234 26.0279 NEREAPGTPRAPGAR-p Q9P206-3;T196-p NEREAPGTPRAPGAR 0.0698679459031298 0.507989715666707 0.786 -0.174666666666667 24.9314966198977 3.94188613119116 0.786 -0.174666666666667 0.00321255327159447 0.403470128740235 5.0264478736708 -0.90585288167807 Q9P206 KIAA1522 Q9P206.3.T196.p_KIAA1522 Q9P206-3_T196t _1_1_196_196 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4641.4641.2 8.35 4.57 99 1 1 1 0 518.756 956.5363 T196t TMT10 192 (R) EAPGtPR (A) EAPGT(1.0)PR t:Phosphorylated T KIAA1522 108782.6 1 8 62.1 704.36 HUMAN 1 24.9315 -3.9419 NERVKDASPNQVAEK-p O43402;S103-p NERVKDASPNQVAEK 0.603140826850623 0.027023557058334 0.089 -0.297333333333333 4.05475500313123 21.2839768708335 0.089 -0.297333333333333 0.39311942117603 0.00744050328760821 0.927581698365653 -4.15587401652275 O43402 EMC8 O43402.S103.p_EMC8 O43402_S103s _1_1_103_103 O43402 O43402|O43402-2 ER membrane protein complex subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10217.10217.2 12.84 12.84 99 1 1 1 0 1027.0657 1973.1635 S103s TMT10 99 (R) VKDAsPNQVAEK (V) VKDAS(1.0)PNQVAEK K:TMT10,s:Phosphorylated S EMC8 24229 2 1 6250.1 12.84 HUMAN 1 4.0548 -21.284 NESGSNLSDSGSVKR-p Q9UDT6;S207-p NESGSNLSDSGSVKR 0.0659357086344822 0.188692065300646 -0.643 -0.174 25.4589048086876 9.52449110970965 -0.643 -0.174 0.00284517850590704 0.111570887835182 -5.16095011849438 -1.89847604739327 Q9UDT6 CLIP2 Q9UDT6.S207.p_CLIP2 Q9UDT6_S207s _1_1_207_207 Q9UDT6 Q9UDT6|Q9UDT6-2 CAP-Gly domain-containing linker protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8872.8872.2 19.84 19.67 1.904 6 1 1 0 1038.9976 1997.0187 S207s TMT10 198 (K) TGNESGSNLsDSGSVK (R) T(0.0)GNES(0.0)GS(0.0)NLS(0.99)DS(0.0)GS(0.0)VK K:TMT10,s:Phosphorylated S CLIP2 116291.8 1 24 372.2 339.16 HUMAN 1 -25.4589 -9.5245 NESQWKDSPLATRHR-p O95155-4;S854-p NESQWKDSPLATRHR 0.976029394576063 0.720357318838227 -0.005 0.0356666666666667 0.206474222126756 1.96306321574059 -0.00500000000000002 0.0356666666666667 0.953569996473509 0.636346527337537 -0.0609722111164718 0.500548774485113 O95155 UBE4B O95155.4.S854.p_UBE4B O95155-4_S854s _1_1_854_854 O95155-4 O95155-4|O95155-2|O95155-3 Isoform 4 of Ubiquitin conjugation factor E4 B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11670.11670.2 16.68 13.59 4.334 3 1 1 0 1092.5473 2104.1187 S854s TMT10 846 (K) NNESQWKDsPLATR (H) NNES(0.0)QWKDS(0.99)PLAT(0.0)R K:TMT10,s:Phosphorylated S UBE4B 152984.7 3 8 989.1 191.62 HUMAN 1 -0.2065 1.9631 NESSDEISDAEQMPQ-p Q3L8U1;S616-p NESSDEISDAEQMPQ 0.34689437832203 0.194186844325725 -0.154666666666667 0.189333333333333 8.54224059915501 9.35906175049142 -0.154666666666667 0.189333333333333 0.139886543788232 0.115902772538164 -1.72912056028207 1.86983586621769 Q3L8U1 CHD9 Q3L8U1.S616.p_CHD9 Q3L8U1_S616s _1_1_616_616 Q3L8U1 Q3L8U1|Q3L8U1-3|Q3L8U1-2 Chromodomain-helicase-DNA-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11356.11356.4 11.95 11.95 1.147 4 1 1 0 803.4087 3130.6406 S616s TMT10 607 (K) RKNESSDEIsDAEQMPQHTLK (D) RKNES(0.0)S(0.0)DEIS(0.99)DAEQMPQHT(0.0)LK K:TMT10,s:Phosphorylated S CHD9 328184.1 1 3 1062.1 182 HUMAN 1 -8.5422 9.3591 NESSFSASLGRAGGV-p Q5JSZ5;S783-p NESSFSASLGRAGGV 0.21671898036419 0.0302980075022781 -0.201666666666667 -0.405666666666667 12.7997142004776 20.5366556864003 -0.201666666666667 -0.405666666666667 0.0524841997795863 0.00883760183875597 -2.47503835624165 -3.9912174478723 Q5JSZ5 PRRC2B Q5JSZ5.S783.p_PRRC2B Q5JSZ5_S783s _1_1_783_783 Q5JSZ5 Q5JSZ5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9563.9563.3 10.52 10.52 1.344 4 1 1 0 573.6198 1638.8761 S783s TMT10 774 (R) VRNESSFSAsLGR (A) VRNES(0.0)S(0.0)FS(0.0)AS(0.99)LGR s:Phosphorylated S PRRC2B 244103.4 2 65 36.2 882.05 HUMAN 1 -12.7997 -20.5367 NETLFLESTNKIYKD-p Q9HB90;S95-p NETLFLESTNKIYKD 0.548510054717454 0.0337519316033129 -0.0793333333333333 0.329666666666667 4.81375552918192 19.8384026667083 -0.0793333333333333 0.329666666666667 0.330083979923324 0.0103791008852151 -1.06981465939598 3.84079837023873 Q9HB90 RRAGC Q9HB90.S95.p_RRAGC Q9HB90_S95s _1_1_95_95 Q9HB90 Q9NQL2|Q9HB90 Ras-related GTP-binding protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23515.23515.2 16.62 16.62 1.311 4 1 1 0 1075.0352 2069.0989 S95s TMT10 85 (K) MSPNETLFLEsTNK (I) MS(0.0)PNET(0.0)LFLES(0.99)T(0.0)NK K:TMT10,s:Phosphorylated S RRAGC 44622.6 11 2 2701.1 73.48 HUMAN 1 -4.8138 19.8384 NETQPPQSE______-p P35580-4;S2006-p NETQPPQSE______ 0.639307517615777 0.0124767762446552 -0.103666666666667 0.677333333333333 3.62785937329919 26.5682018101045 -0.103666666666667 0.677333333333334 0.43372460749033 0.00220383877036239 -0.845290797124154 5.44487855531959 P35580 MYH10 P35580.4.S2006.p_MYH10 P35580-4_S2006s _1_1_2006_2006 P35580-4 P35580-4|P35580-3|P35580-2|P35580-5 Isoform 4 of Myosin-10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7362.7362.2 14.15 11.22 4.629 4 1 1 0 870.8798 1660.7863 S2006s TMT10 1995 (K) TSDVNETQPPQsE (-) T(0.0)S(0.0)DVNET(0.0)QPPQS(0.99)E s:Phosphorylated S MYH10 233493.8 2 44 296.2 379.15 HUMAN 1 -3.6279 26.5682 NEVDGQDYHFVVSRE-p Q5JUW8;Y705-p NEVDGQDYHFVVSRE 0.850600175936078 0.175244975809333 -0.0303333333333333 0.210666666666667 1.35982501134149 9.94544237529865 -0.0303333333333333 0.210666666666667 0.731168543591779 0.101264159520271 -0.361851000090963 1.97144112824342 Q5JUW8 NotFound Q5JUW8.Y705.p_NotFound Q5JUW8_Y705y _1_1_705_705 Q5JUW8 Q5JUW8|Q92796|Q92796-2|Q92796-3 Discs, large homolog 3 (Neuroendocrine-dlg, Drosophila), isoform CRA_b GG20160819_MSz_CCLE_T4D7_pY_Injection_02.10928.10973.3 30.93 22.8 9.985 2 1 1 0 749.0139 2165.0573 Y705y TMT10 696 (R) RDNEVDGQDyHFVVSR (E) RDNEVDGQDY(0.99)HFVVS(0.0)R y:Phosphorylated Y DLG3 94175.4 4 1 86.1 30.93 HUMAN 1 -1.3598 9.9454 NFDIRRPSLEHRQLN-p Q8WU20;S428-p NFDIRRPSLEHRQLN 0.194002306690035 0.530204674616888 -0.202666666666667 0.126666666666667 13.8993418234369 3.70532362443808 -0.202666666666667 0.126666666666667 0.0407442021271006 0.426056933795726 -2.67445602511723 0.860227499059715 Q8WU20 FRS2 Q8WU20.S428.p_FRS2 Q8WU20_S428s _1_1_428_428 Q8WU20 Q8WU20 Fibroblast growth factor receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18802.18802.4 12.53 12.53 2.333 3 1 1 0 668.0776 2589.3194 S428s TMT10 414 (R) DCTPTVFNFDIRRPsLEHR (Q) DCT(0.0)PT(0.0)VFNFDIRRPS(0.99)LEHR C:Carbamidomethylation,s:Phosphorylated S FRS2 57427.4 4 12 301.1 376.53 HUMAN 1 -13.8993 3.7053 NFDYKSPSPFDCSTD-p Q8TD26;S36-p NFDYKSPSPFDCSTD 0.35484284135091 0.017893597442434 -0.208 0.348 8.36216762889888 24.0598026341874 -0.208 0.348 0.145808632587393 0.00392662779616107 -1.69793609545967 4.80382359248697 Q8TD26 CHD6 Q8TD26.S36.p_CHD6 Q8TD26_S36s _1_1_36_36 Q8TD26 Q8TD26|Q8TD26-3|Q8TD26-2 Chromodomain-helicase-DNA-binding protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22234.22234.5 13.67 13.67 1.196 5 1 1 0 755.162 3691.8187 S36s TMT10 34 (K) SPsPFDCSTDQEEKIEDVASHCLPQK (D) S(0.0)PS(0.99)PFDCS(0.0)T(0.0)DQEEKIEDVAS(0.0)HCLPQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CHD6 308259.4 2 2 1006.1 189.22 HUMAN 1 -8.3622 24.0598 NFEEHSMSPEREMGN-p P38398;S1009-p NFEEHSMSPEREMGN 0.266310981606101 0.123074582738133 0.206666666666667 -0.173333333333333 10.8881816287454 12.0006238394038 0.206666666666667 -0.173333333333333 0.0815045468422468 0.0630866717543629 2.13653098605064 -2.33128195088708 P38398 BRCA1 P38398.S1009.p_BRCA1 P38398_S1009s _1_1_1009_1009 P38398 P38398-7|P38398-4|P38398-8|Q5YLB2 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23032.23032.5 25.11 22.53 1.138 7 1 1 0 797.9697 3905.8483 S1009s TMT10 997 (K) NLLEENFEEHSMsPEREMGNENIPSTVSTISR (N) NLLEENFEEHS(0.0)MS(0.99)PEREMGNENIPS(0.0)T(0.0)VS(0.0)T(0.0)IS(0.0)R s:Phosphorylated S BRCA1 210227.6 12 11 106.1 588.91 HUMAN 1 10.8882 -12.0006 NFENANLSALNLKIS-p Q9ULJ1-4;S86-p NFENANLSALNLKIS 0.456854636111495 0.873268242874909 -0.126666666666667 -0.0163333333333333 6.26932705513987 0.829587545948926 -0.126666666666667 -0.0163333333333333 0.236084402064389 0.826116402998026 -1.3324034700094 -0.230546272674476 Q9ULJ1 ODF2L Q9ULJ1.4.S86.p_ODF2L Q9ULJ1-4_S86s _1_1_86_86 Q9ULJ1-4 Q9ULJ1-4|Q9ULJ1-2|Q9ULJ1-3|Q9ULJ1-6 Isoform 4 of Outer dense fiber protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.29683.29683.3 16.39 16.39 99 1 1 1 0 700.3832 2019.1639 S86s TMT10 78 (K) INFENANLsALNLK (I) INFENANLS(1.0)ALNLK K:TMT10,s:Phosphorylated S ODF2L 75676.9 1 1 5776.1 16.39 HUMAN 1 -6.2693 -0.8296 NFERQSGTPPGMGAP-p Q9P260-2;T143-p NFERQSGTPPGMGAP 0.407878856431238 0.643593713995567 0.125 0.0526666666666667 7.18911048955975 2.60899993306353 0.125 0.0526666666666667 0.191024446970773 0.548403233345509 1.49407709610246 0.639728602316492 Q9P260 KIAA1468 Q9P260.2.T143.p_KIAA1468 Q9P260-2_T143t _1_1_143_143 Q9P260-2 Q9P260-2|A0A075B785 Isoform 2 of LisH domain and HEAT repeat-containing protein KIAA1468 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13862.13862.3 10.19 5.87 10.194 5 1 1 0 1209.5865 3546.7669 T143t TMT10 140 (R) QSGtPPGMGAPGVPGAAGVGGAGGREPSTASGGGQLNR (A) Q(0.0)S(0.0)GT(0.99)PPGM(0.0)GAPGVPGAAGVGGAGGREPS(0.0)T(0.0)AS(0.0)GGGQLN(0.0)R t:Phosphorylated T KIAA1468 139711.8 3 3 724.1 236.86 HUMAN 1 7.1891 2.609 NFESFPESPGEKGQF-p Q96Q05-2;S1051-p NFESFPESPGEKGQF 0.376746768297789 0.164031797091666 -0.131666666666667 -0.143 7.83824366181889 10.3231899104411 -0.131666666666667 -0.143 0.164503686104788 0.0928284307757212 -1.60708712544963 -2.03706583992698 Q96Q05 TRAPPC9 Q96Q05.2.S1051.p_TRAPPC9 Q96Q05-2_S1051s _1_1_1051_1051 Q96Q05-2 Q96Q05-2|Q96Q05-3 Isoform 2 of Trafficking protein particle complex subunit 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27950.27950.4 21.62 21.62 6.011 2 1 1 0 767.6432 2987.5792 S1051s TMT10 1036 (R) MAIQVDKFNFESFPEsPGEK (G) MAIQVDKFNFES(0.0)FPES(0.99)PGEK K:TMT10,s:Phosphorylated S TRAPPC9 140860.7 12 2 3728.1 44.37 HUMAN 1 -7.8382 -10.3232 NFEVARESGPPHMKN-p O95793;S208-p NFEVARESGPPHMKN 0.800189174673997 0.00822268881443263 0.045 -0.451 1.86556887342232 29.6648498651623 0.045 -0.451 0.65079335917154 0.00108022696349235 0.478821113345829 -6.32092596719018 O95793 STAU1 O95793.S208.p_STAU1 O95793_S208s _1_1_208_208 O95793 O95793|O95793-2|Q5JW30|A0A087X1A5 Double-stranded RNA-binding protein Staufen homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19222.19222.4 17.2 17.2 99 1 1 1 0 640.835 2480.3484 S208s TMT10 197 (R) NLPVNFEVAREsGPPHMK (N) NLPVNFEVARES(1.0)GPPHMK K:TMT10,s:Phosphorylated S STAU1 63466.4 1 3 1249.1 162.06 HUMAN 1 1.8656 -29.6648 NFFEKRVSEYQRFAV-p Q7LG56;S329-p NFFEKRVSEYQRFAV 0.362002918323239 0.0665607083904215 -0.158 -0.243 8.19899610567019 15.6524511344047 -0.158 -0.243 0.151391115644725 0.0272116506385183 -1.66966457264206 -2.9996753878989 Q7LG56 RRM2B Q7LG56.S329.p_RRM2B Q7LG56_S329s _1_1_329_329 Q7LG56 Q7LG56-6|Q7LG56-2 Ribonucleoside-diphosphate reductase subunit M2 B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4341.4341.3 8.78 8.78 8.777 2 1 1 0 416.2091 1166.6479 S329s TMT10 327 (K) RVsEYQR (F) RVS(0.99)EY(0.0)QR s:Phosphorylated S RRM2B 40964 1 2 4898.1 25.33 HUMAN 1 -8.199 -15.6525 NFFHHFHSKRGMWSR-p Q6L9W6;S985-p NFFHHFHSKRGMWSR 0.377998805237944 0.701054130123939 -0.177333333333333 -0.0773333333333334 7.80912362497204 2.12020983061483 -0.177333333333333 -0.0773333333333334 0.165610411965309 0.613732351795213 -1.60203025828193 -0.535198273178142 Q6L9W6 B4GALNT3 Q6L9W6.S985.p_B4GALNT3 Q6L9W6_S975sS985s_2_2_975_985 Q6L9W6 Q6L9W6 Beta-1,4-N-acetylgalactosaminyltransferase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10464.10464.3 7.71 1.53 99 2 2 2 0 815.742 2284.298 S975s N978n S985s TMT10 974 (R) LsLRnFFHHFHsKR (G) LS(1.0)LRN(1.0)FFHHFHS(1.0)KR K:TMT10,s:Phosphorylated S,n:Deamidated B4GALNT3 115429.2 1 2 6275.1 12.65 HUMAN 1 -7.8091 -2.1202 NFGGHRDYGPRTDAD-p Q92804;Y218-p NFGGHRDYGPRTDAD 0.929907092825432 0.769966876299876 0.0226666666666666 0.0306666666666667 0.626307148439245 1.5686430056301 0.0226666666666666 0.0306666666666667 0.865703722861885 0.696844215693263 0.177322454748887 0.410960169358823 Q92804 TAF15 Q92804.Y218.p_TAF15 Q92804_Y218y _1_1_218_218 Q92804 Q92804|Q92804-2|A0A075B7D9 TATA-binding protein-associated factor 2N GG20160819_MSz_CCLE_T4D7_pY_Injection_01.5226.5226.3 13.18 13.18 99 1 1 1 0 528.914 1504.7607 Y218y TMT10 211 (K) NFGGHRDyGPR (T) NFGGHRDY(1.0)GPR y:Phosphorylated Y TAF15 62057.1 2 2 65.1 36.31 HUMAN 1 0.6263 1.5686 NFGGSPGYGGGRGGY-p P22626;Y262-p NFGGSPGYGGGRGGY 0.927524696479116 0.0699465752550046 -0.017 -0.712 0.646729657008695 15.3627335471188 -0.017 -0.712 0.861642345576576 0.0290888562371826 -0.182754995172665 -2.94478419658188 P22626 HNRNPA2B1 P22626.Y262.p_HNRNPA2B1 P22626_Y262y _1_1_262_262 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.19564.19564.3 32.33 32.33 7.203 4 1 1 0 935.394 2724.2025 Y262y TMT10 239 (R) GFGDGYNGYGGGPGGGNFGGSPGyGGGR (G) GFGDGY(0.0)NGY(0.0)GGGPGGGNFGGS(0.0)PGY(0.99)GGGR y:Phosphorylated Y HNRNPA2B1 37486.1 2 4 2.1 134.47 HUMAN 1 -0.6467 -15.3627 NFGPGPGSNFRGGSD-p P22626;S225-p NFGPGPGSNFRGGSD 0.228878488783423 0.169068246271342 0.187 0.139666666666667 12.30477650707 10.1541451099248 0.187 0.139666666666667 0.0588196382625841 0.0965129274669775 2.38651302881963 2.00767788250308 P22626 HNRNPA2B1 P22626.S225.p_HNRNPA2B1 P22626_S225s _1_1_225_225 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12284.12284.2 13.81 13.81 99 1 1 1 0 843.8837 1606.7924 S225s TMT10 214 (R) GGGGNFGPGPGsNFR (G) GGGGNFGPGPGS(1.0)NFR s:Phosphorylated S HNRNPA2B1 37486.1 9 10 299.1 378.08 HUMAN 1 12.3048 10.1541 NFGSHVLTPAEMEAF-p Q14C86-6;T907-p NFGSHVLTPAEMEAF 0.448379033469937 0.173733990004366 0.115333333333333 -0.165333333333333 6.42998428166622 9.99557943485583 0.115333333333333 -0.165333333333333 0.227510566500184 0.100101839094862 1.36081765519758 -1.98014210680866 Q14C86 GAPVD1 Q14C86.6.T907.p_GAPVD1 Q14C86-6_T907t _1_1_907_907 Q14C86-6 Q14C86-6|Q14C86-2|Q14C86-5|Q14C86-4|Q14C86-3|F8W9S7 Isoform 6 of GTPase-activating protein and VPS9 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29567.29567.3 22.17 22.17 9.998 2 1 1 0 842.7672 2446.3205 T907t TMT10 898 (R) LPNFGSHVLtPAEMEAFK (Q) LPNFGS(0.0)HVLT(0.99)PAEMEAFK K:TMT10,t:Phosphorylated T GAPVD1 167648.8 1 10 268.1 394.98 HUMAN 1 6.43 -9.9956 NFGVSKPSE______-p Q8IZH2;S1705-p NFGVSKPSE______ 0.95686918828698 0.876241448433759 0.015 -0.021 0.376056931674905 0.807488742465497 0.015 -0.021 0.917052727389552 0.830330757869104 0.109102793977575 -0.224844922047032 Q8IZH2 XRN1 Q8IZH2.S1705.p_XRN1 Q8IZH2_S1705s _1_1_1705_1705 Q8IZH2 Q8IZH2|Q8IZH2-2 5'-3' exoribonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24006.24006.3 9.08 9.08 5.071 2 1 1 0 595.9905 1705.9889 S1705s TMT10 1695 (K) LAVNFGVSKPsE (-) LAVNFGVS(0.0)KPS(0.99)E K:TMT10,s:Phosphorylated S XRN1 195644.2 1 9 2073.1 99.19 HUMAN 1 0.3761 -0.8075 NFHQRFESPESQASA-p O75436;S315-p NFHQRFESPESQASA 0.409041787828506 0.449087873422719 0.144666666666667 -0.0933333333333333 7.15796578082577 4.63397763650086 0.144666666666667 -0.0933333333333333 0.192399270890315 0.344034690331075 1.48863694722534 -1.03633758694225 O75436 VPS26A O75436.S315.p_VPS26A O75436_S315s _1_1_315_315 O75436 O75436 Vacuolar protein sorting-associated protein 26A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12938.12938.3 10.88 10.88 1.147 4 1 1 0 920.4054 2679.2307 S315s TMT10 307 (R) TNFHQRFEsPESQASAEQPEM (-) T(0.0)NFHQRFES(0.99)PES(0.0)QAS(0.0)AEQPEM s:Phosphorylated S VPS26A 38283.3 3 2 4320.1 33.7 HUMAN 1 7.158 -4.634 NFKKKGCTWGPNSIQ-p A0A1W2PKR9;T592-p NFKKKGCTWGPNSIQ 0.456411337786712 0.627746932194286 -0.156666666666667 0.0486666666666667 6.2784498566178 2.75048768101121 -0.156666666666667 0.0486666666666667 0.235589003039738 0.530824833128956 -1.3340192898683 0.669171782710947 A0A1W2PKR9 NotFound A0A1W2PKR9.T592.p_NotFound A0A1W2PKR9_T592t _1_1_592_592 A0A1W2PKR9 Q5TCX8|A0A1W2PKR9|Q5TCX8-3|X6R610 Mitogen-activated protein kinase kinase kinase 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20443.20443.3 8.08 8.08 3.209 2 1 1 0 639.6445 1836.9501 T592t TMT10 590 (K) GCtWGPNSIQMK (D) GCT(0.99)WGPNS(0.0)IQMK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MAP3K21 115095.7 2 3 2799.1 70.16 HUMAN 1 -6.2784 2.7505 NFKKSGSSPKWTHDK-p Q9NYF8;S884-p NFKKSGSSPKWTHDK 0.317958158880426 0.607633797902582 0.210666666666667 -0.0786666666666666 9.31918551194297 2.93768096938276 0.210666666666667 -0.0786666666666666 0.116971874278539 0.508430860236769 1.86363069620203 -0.707627787348271 Q9NYF8 BCLAF1 Q9NYF8.S884.p_BCLAF1 Q9NYF8_S884s _1_1_884_884 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|Q9NYF8-4 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7336.7336.4 10.53 6.65 1.319 4 1 1 0 589.3324 2274.3376 S884s TMT10 880 (K) KSGSsPKWTHDK (Y) KS(0.0)GS(0.0)S(0.99)PKWT(0.0)HDK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 35 39 10.1 1293.04 HUMAN 1 9.3192 -2.9377 NFLEDNPSLKDIMLA-p Q9H0K1;S534-p NFLEDNPSLKDIMLA 0.444245028437086 0.170410364738629 -0.123 0.188333333333333 6.49378150737533 10.1027421313239 -0.123 0.188333333333333 0.224192897173976 0.097662038903644 -1.37207763857444 1.99874841975272 Q9H0K1 SIK2 Q9H0K1.S534.p_SIK2 Q9H0K1_S534s _1_1_534_534 Q9H0K1 Q9H0K1 Serine/threonine-protein kinase SIK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31356.31356.4 21.29 21.29 10.529 2 1 1 0 792.158 3085.6392 S534s TMT10 525 (R) DLNFLEDNPsLKDIMLANQPSPR (M) DLNFLEDNPS(0.99)LKDIMLANQPS(0.0)PR K:TMT10,s:Phosphorylated S SIK2 104769.2 2 5 1626.1 126.2 HUMAN 1 -6.4938 10.1027 NFLIREMSGSTSELL-p Q9NS91;S142-p NFLIREMSGSTSELL 0.847146987239968 0.086109363453306 0.0283333333333333 -0.186 1.3953351856543 14.0969556167368 0.0283333333333333 -0.186 0.725214504347864 0.03893179593644 0.370301560677111 -2.70909833093515 Q9NS91 RAD18 Q9NS91.S142.p_RAD18 Q9NS91_S142s _1_1_142_142 Q9NS91 Q9NS91|F8WE49 E3 ubiquitin-protein ligase RAD18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22440.22440.2 8.35 4.63 1.104 4 1 1 0 916.9769 1752.9818 S142s TMT10 140 (R) EMsGSTSELLIK (E) EMS(0.99)GS(0.0)T(0.0)S(0.0)ELLIK K:TMT10,s:Phosphorylated S RAD18 57077.5 5 2 1349.1 151 HUMAN 1 1.3953 -14.097 NFLRMCESTELNMTF-p P51674;S204-p NFLRMCESTELNMTF 0.373228695696441 0.184537258531495 0.305 0.213666666666667 7.93402560031795 9.64663176439909 0.305 0.213666666666667 0.16091533731851 0.108476789577484 1.6237136869761 1.91963269834873 P51674 GPM6A P51674.S204.p_GPM6A P51674_S204sT205tT210t_3_3_204_210 P51674 P51674|P51674-2|P51674-3 Neuronal membrane glycoprotein M6-a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31779.31809.5 7.54 4.75 1.368 6 3 3 0 1043.4835 4972.5298 S204s T205t T210t N238n Hydrogen 201 (R) MCEstELNMtFHLFIVALAGAGAAVIAMVHYLMVLSAnWAYVK (D) MCES(0.99)T(0.99)ELN(0.0)MT(0.99)FHLFIVALAGAGAAVIAMVHY(0.0)LMVLS(0.0)AN(0.99)WAY(0.0)VK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated GPM6A 31950.7 1 1 7135.1 7.54 HUMAN 1 7.934 9.6466 NFRANTLSPVRFFVD-p Q9H792;S281-p NFRANTLSPVRFFVD 0.278656842374099 0.878083176837687 0.171 -0.017 10.4941838280334 0.792872282530058 0.171 -0.017 0.0892445321560698 0.833129997272841 2.06771335130636 -0.22106274512498 Q9H792 PEAK1 Q9H792.S281.p_PEAK1 Q9H792_S281s _1_1_281_281 Q9H792 Q9H792|H0YN99 Pseudopodium-enriched atypical kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24412.24412.4 12.33 12.33 1.112 2 1 1 0 598.0959 2309.3948 S281s TMT10 277 (R) ANTLsPVRFFVDKK (W) ANT(0.0)LS(0.99)PVRFFVDKK K:TMT10,s:Phosphorylated S PEAK1 195156.9 4 2 583.1 265.81 HUMAN 1 10.4942 -0.7929 NFRCRSVSPAVHRQR-p Q2KHR2;S1071-p NFRCRSVSPAVHRQR 0.209838173081625 0.0028998898692722 0.24 -1.434 13.090918335393 38.3278372797015 0.24 -1.434 0.0490804082428352 0.000146965796270079 2.5274629014788 -9.40409893476722 Q2KHR2 RFX7 Q2KHR2.S1071.p_RFX7 Q2KHR2_S1071s _1_1_1071_1071 Q2KHR2 Q2KHR2|Q2KHR2-2|H0YLX2 DNA-binding protein RFX7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4608.4608.2 10.87 6.34 2.728 2 1 1 0 581.303 1081.6316 S1071s TMT10 1069 (R) SVsPAVHR (Q) S(0.0)VS(0.99)PAVHR s:Phosphorylated S RFX7 147863 2 14 511.1 287.25 HUMAN 1 13.0909 -38.3278 NFSDLNHSKNKVSSE-p O60673;S715-p NFSDLNHSKNKVSSE 0.148266672319898 0.00670130303311298 -0.251 -0.473666666666667 16.7702016168936 31.2273039452823 -0.251 -0.473666666666667 0.0210368077621188 0.000753823384181796 -3.2175100296526 -6.80303223193386 O60673 REV3L O60673.S715.p_REV3L O60673_S715s _1_1_715_715 O60673 O60673|O60673-2 DNA polymerase zeta catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17303.17303.3 16.83 13.39 6.041 3 1 1 0 649.9847 1867.9703 S715s TMT10 705 (K) NSFNFSDLNHsK (N) NS(0.0)FNFS(0.0)DLNHS(0.99)K K:TMT10,s:Phosphorylated S REV3L 356192.6 1 3 524.1 282.7 HUMAN 1 -16.7702 -31.2273 NFSEEGETEEDDQDS-p Q5JTV8;T220-p NFSEEGETEEDDQDS 0.839442217239864 0.555201351683552 -0.0296666666666667 0.0566666666666667 1.4680717957395 3.44295087295635 -0.0296666666666667 0.0566666666666667 0.71316959676208 0.452589957001016 -0.387491592529344 0.80890653896634 Q5JTV8 TOR1AIP1 Q5JTV8.T220.p_TOR1AIP1 Q5JTV8_T220t _1_1_220_220 Q5JTV8 J3KN66|Q5JTV8-3|A0A0A0MSK5|Q5JTV8-2 Torsin-1A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14881.14881.3 21.69 21.69 1.185 8 1 1 0 1098.8247 3214.4912 T220t TMT10 212 (K) VNFSEEGEtEEDDQDSSHSSVTTVK (A) VNFS(0.0)EEGET(0.99)EEDDQDS(0.0)S(0.0)HS(0.0)S(0.0)VT(0.0)T(0.0)VK K:TMT10,t:Phosphorylated T TOR1AIP1 66418.4 3 11 585.1 265.22 HUMAN 1 -1.4681 3.443 NFVFHTLSPVKAEAA-p Q9HAW4;S1289-p NFVFHTLSPVKAEAA 0.69342676446775 0.000952253650599092 0.0746666666666667 -2.05166666666667 2.98319297107788 63.7141932854196 0.0746666666666667 -2.05166666666667 0.503130566775075 4.25187679312786e-07 0.716996529944233 -28.2774162402864 Q9HAW4 CLSPN Q9HAW4.S1289.p_CLSPN Q9HAW4_S1289s _1_1_1289_1289 Q9HAW4 Q9HAW4|Q9HAW4-3|E7ESG2|Q9HAW4-2 Claspin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22283.22283.3 16.91 16.91 1.838 2 1 1 0 609.6713 1747.0307 S1289s TMT10 1282 (R) NFVFHTLsPVK (A) NFVFHT(0.0)LS(0.99)PVK K:TMT10,s:Phosphorylated S CLSPN 151718.8 7 10 506.1 289.61 HUMAN 1 2.9832 -63.7142 NGAAGPHSPDPLLDE-p Q9H3Q1;S174-p NGAAGPHSPDPLLDE 0.0767500903605449 0.00815711556871563 -0.356666666666667 -0.509666666666667 23.9122390855219 29.7574103105463 -0.356666666666667 -0.509666666666667 0.00406233833799156 0.00105744787534018 -4.77345158936821 -6.34869722542042 Q9H3Q1 CDC42EP4 Q9H3Q1.S174.p_CDC42EP4 Q9H3Q1_S174s _1_1_174_174 Q9H3Q1 Q9H3Q1|Q9H3Q1-2 Cdc42 effector protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28460.28460.5 29.74 24.26 16.345 2 1 1 0 733.7817 3584.9113 S174s TMT10 166 (R) RNGAAGPHsPDPLLDEQAFGDLTDLPVVPK (A) RNGAAGPHS(0.99)PDPLLDEQAFGDLT(0.0)DLPVVPK K:TMT10,s:Phosphorylated S CDC42EP4 38036.3 21 10 635.1 256.47 HUMAN 1 -23.9122 -29.7574 NGAPAGESPQPKAAP-p Q96TA1;S681-p NGAPAGESPQPKAAP 0.426183371415832 0.14008918643248 0.108666666666667 -0.152 6.82376984752039 11.2492129373882 0.108666666666667 -0.152 0.207789221158427 0.0750030123373361 1.4301284100847 -2.19881085521349 Q96TA1 FAM129B Q96TA1.S681.p_FAM129B Q96TA1_S681s _1_1_681_681 Q96TA1 Q96TA1|Q96TA1-2 Niban-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24262.24262.3 25.52 25.52 15.323 2 1 1 0 1185.6428 3474.9473 S681s TMT10 655 (R) GLLAQGLRPESPPPAGPLLNGAPAGEsPQPK (A) GLLAQGLRPES(0.0)PPPAGPLLNGAPAGES(0.99)PQPK K:TMT10,s:Phosphorylated S FAM129B 84649.8 6 8 1146.1 172.91 HUMAN 1 6.8238 -11.2492 NGCLNGYTPSRKRQA-p Q9BZX2;T246-p NGCLNGYTPSRKRQA 0.215102413706098 0.017893597442434 -0.296666666666667 -0.466 12.8601804894401 24.0604177680843 -0.296666666666667 -0.466 0.0517585321056476 0.0039260716687158 -2.48590245954653 -4.80397399532467 Q9BZX2 UCK2 Q9BZX2.T246.p_UCK2 Q9BZX2_T246t _1_1_246_246 Q9BZX2 Q9BZX2|Q9BZX2-2 Uridine-cytidine kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5611.5611.3 11.18 11.18 1.923 4 1 1 0 644.9688 1852.9285 T246t TMT10 236 (K) RQTNGCLNGYtPSR (K) RQT(0.0)NGCLNGY(0.0)T(0.99)PS(0.0)R C:Carbamidomethylation,t:Phosphorylated T UCK2 29469.8 3 1 3690.1 45.33 HUMAN 1 -12.8602 -24.0604 NGCMRDPTLYRCKIQ-p P07814;T355-p NGCMRDPTLYRCKIQ 0.837456841964157 0.00828279311297773 0.0303333333333333 0.524333333333333 1.49007047137796 29.6018433887569 0.0303333333333333 0.524333333333333 0.70956625399776 0.00109601288821019 0.392659648432298 6.30207723855967 P07814 EPRS P07814.T355.p_EPRS P07814_T355t _1_1_355_355 P07814 P07814 Bifunctional glutamate/proline--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14622.14670.3 14.37 9.76 1.406 4 1 1 0 780.3453 2259.0518 T355t TMT10 342 (K) IDMSSNNGCMRDPtLYR (C) IDMS(0.0)S(0.0)NNGCMRDPT(0.99)LY(0.0)R C:Carbamidomethylation,t:Phosphorylated T EPRS 172185.3 1 1 375.1 337.76 HUMAN 1 1.4901 29.6018 NGDILNSSTEEKFKA-p Q96RT1-8;S715-p NGDILNSSTEEKFKA 0.843530194911308 0.883307078691396 -0.0283333333333333 0.0156666666666667 1.43104934960299 0.757377821876631 -0.0283333333333333 0.0156666666666667 0.719275164535724 0.839966987727263 -0.378761812037097 0.211840433079503 Q96RT1 ERBB2IP Q96RT1.8.S715.p_ERBB2IP Q96RT1-8_S714sS715s_2_2_714_715 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5|Q96RT1-4|Q96RT1-6|Q96RT1-7 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27332.27332.3 13.73 13.73 1.152 4 2 2 0 1171.5443 3351.7069 N708n S714s S715s TMT10 695 (K) IRQEDENFNSLLQnGDILNssTEEK (F) IRQEDEN(0.0)FN(0.0)S(0.0)LLQN(0.99)GDILN(0.0)S(0.99)S(0.99)T(0.0)EEK K:TMT10,n:Deamidated,s:Phosphorylated S ERBIN 159762.8 6 33 81.1 633.5 HUMAN 1 -1.431 0.7574 NGDSRAPSEAESFAL-p Q8IY42;S167-p NGDSRAPSEAESFAL 0.30880050022541 0.296247859739026 -0.163333333333333 -0.102333333333333 9.53895029284201 6.97479431828287 -0.163333333333333 -0.102333333333333 0.111200046976976 0.200687613335214 -1.9017092312642 -1.45619950428121 Q8IY42 C4orf19 Q8IY42.S167.p_C4orf19 Q8IY42_S167s_1_1_167_167 Q8IY42 Q8IY42 Uncharacterized protein C4orf19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29577.29577.5 16.17 16.17 1.104 4 1 1 0 1106.1245 5445.6201 S167s N198n TMT10 160 (R) NGDSRAPsEAESFALEVQDHVFQIPAPDYLQHWGPAGDnVDHNEK (D) N(0.0)GDS(0.0)RAPS(0.99)EAES(0.0)FALEVQDHVFQIPAPDY(0.0)LQHWGPAGDN(0.99)VDHN(0.0)EK K:TMT10,s:Phosphorylated S,n:Deamidated C4orf19 34254.4 6 4 703.1 239.48 HUMAN 1 -9.539 -6.9748 NGDSRLDSSEFLKFV-p Q12841;S165-p NGDSRLDSSEFLKFV 0.369805323847201 0.00526062627901912 -0.179333333333333 0.563333333333333 8.01204026980742 33.1243678601878 -0.179333333333333 0.563333333333333 0.158050536003437 0.000487038411160767 -1.63724921956818 7.4285771188834 Q12841 FSTL1 Q12841.S165.p_FSTL1 Q12841_S165s _1_1_165_165 Q12841 Q12841|Q12841-2 Follistatin-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18922.18922.3 17.67 12.26 1.119 3 1 1 0 794.7192 2302.1716 S165s TMT10 155 (K) NFDNGDSRLDsSEFLK (F) NFDNGDS(0.0)RLDS(0.99)S(0.0)EFLK K:TMT10,s:Phosphorylated S FSTL1 36126 1 1 5617.1 17.67 HUMAN 1 -8.012 33.1244 NGEAAMQSSNSESKK-p Q9NVP1;S102-p NGEAAMQSSNSESKK 0.188778224113783 0.155409976728646 0.233666666666667 -0.292 14.1964224978635 10.6335283359616 0.233666666666667 -0.292 0.03805027064802 0.0864265478806817 2.7290537845171 -2.0911169701966 Q9NVP1 DDX18 Q9NVP1.S102.p_DDX18 Q9NVP1_S102s _1_1_102_102 Q9NVP1 Q9NVP1 ATP-dependent RNA helicase DDX18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14057.14057.3 17.02 17.02 1.283 7 1 1 0 827.0635 2399.2124 S102s TMT10 90 (K) STVLTNGEAAMQsSNSESK (K) S(0.0)T(0.0)VLT(0.0)NGEAAMQS(0.99)S(0.0)NS(0.0)ES(0.0)K K:TMT10,s:Phosphorylated S DDX18 75747.7 2 3 2977.1 64.23 HUMAN 1 14.1964 -10.6335 NGERESHTPVSIQEE-p Q12830;T739-p NGERESHTPVSIQEE 0.181449015780176 0.00463161465106776 0.212666666666667 0.657666666666667 14.5981830980494 34.1673829499378 0.212666666666667 0.657666666666667 0.034688194063542 0.000383055502279608 2.80342428581776 7.79267231758293 Q12830 BPTF Q12830.T739.p_BPTF Q12830_T739t _1_1_739_739 Q12830 Q12830|Q12830-4|A0A0A0MR81 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22413.22413.4 18.18 18.18 1.26 3 1 1 0 877.6729 3427.7018 T739t TMT10 726 (K) AADDPENGERESHtPVSIQEEIVGDFK (S) AADDPENGERES(0.0)HT(0.99)PVS(0.0)IQEEIVGDFK K:TMT10,t:Phosphorylated T BPTF 340995.1 5 6 94.1 610.41 HUMAN 1 14.5982 34.1674 NGETREKSPKLKNGF-p Q9NR30;S147-p NGETREKSPKLKNGF 0.896873028140097 0.133287983375454 -0.047 -0.887 0.926773441164246 11.5364823405358 -0.047 -0.887 0.807834982400791 0.0702023687044717 -0.255408090642531 -2.2493071071863 Q9NR30 DDX21 Q9NR30.S147.p_DDX21 Q9NR30_S147s _1_1_147_147 Q9NR30 Q9NR30|Q9NR30-2 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5256.5841.3 9.14 2.75 2.068 2 1 1 0 725.0474 2093.1628 S147s TMT10 138 (K) EMNGETREKsPK (L) EMNGET(0.0)REKS(0.99)PK K:TMT10,s:Phosphorylated S DDX21 87856.3 14 19 103.1 590.75 HUMAN 1 -0.9268 -11.5365 NGGGAGDSLPGSPSR-p Q13425;S82-p NGGGAGDSLPGSPSR 0.512276531895754 0.820259663171498 0.143 0.0303333333333334 5.36917070026138 1.2044311078486 0.143 0.0303333333333334 0.290457724018456 0.757803992821275 1.17130090281861 0.324367020139278 Q13425 SNTB2 Q13425.S82.p_SNTB2 Q13425_S82s _1_1_82_82 Q13425 Q13425|Q13425-2 Beta-2-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.34205.34205.5 27.2 27.2 1.645 7 1 1 0 1000.5018 4918.4908 S82s TMT10 39 (R) VVAELSGESLSLTGDAAAAELEPALGPAAAAFNGLPNGGGAGDsLPGSPSR (G) VVAELS(0.0)GES(0.0)LS(0.0)LT(0.0)GDAAAAELEPALGPAAAAFNGLPNGGGAGDS(0.99)LPGS(0.0)PS(0.0)R s:Phosphorylated S SNTB2 58405 8 1 637.1 255.93 HUMAN 1 5.3692 1.2044 NGGGDDLSNQELIGK-p Q6P0N0;S580-p NGGGDDLSNQELIGK 0.452336375431304 0.512447005471775 -0.159 -0.0993333333333333 6.35564547121672 3.89485293952379 -0.159 -0.0993333333333333 0.231438418454698 0.407863372576791 -1.3476806509557 -0.896827564172121 Q6P0N0 MIS18BP1 Q6P0N0.S580.p_MIS18BP1 Q6P0N0_S580s _1_1_580_580 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21675.21675.4 11.06 11.06 1.177 2 1 1 0 921.7186 3603.8858 S580s TMT10 562 (R) FPDDQVNNTIQNGGGDDLsNQELIGKK (E) FPDDQVNNT(0.0)IQNGGGDDLS(0.99)NQELIGKK K:TMT10,s:Phosphorylated S MIS18BP1 129996 1 19 54.1 728.39 HUMAN 1 -6.3556 -3.8949 NGGIAAGSSGKGRGA-p Q9UBL3;S291-p NGGIAAGSSGKGRGA 0.584245183878784 0.00816768591511242 0.203 -0.528 4.29503343456741 29.7239912345857 0.203 -0.528 0.371960357579286 0.0010656163529018 0.973121898452456 -6.33865919293464 Q9UBL3 ASH2L Q9UBL3.S291.p_ASH2L Q9UBL3_S291s _1_1_291_291 Q9UBL3 Q9UBL3|Q9UBL3-3 Set1/Ash2 histone methyltransferase complex subunit ASH2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12318.12318.3 19.48 19.48 1.22 7 1 1 0 830.0853 2408.2782 S291s TMT10 273 (K) QSSAVSTSGNLNGGIAAGsSGK (G) QS(0.0)S(0.0)AVS(0.0)T(0.0)S(0.0)GNLNGGIAAGS(0.99)S(0.0)GK K:TMT10,s:Phosphorylated S ASH2L 69349.2 1 2 3331.1 53.66 HUMAN 1 4.295 -29.724 NGGPSRMSPKAQRPL-p Q8WWM7-3;S409-p NGGPSRMSPKAQRPL 0.816530890745719 0.10605417322774 0.033 -0.222333333333333 1.69048583925421 12.8750489071522 0.033 -0.222333333333333 0.677565705028758 0.0515816356283072 0.439111984947044 -2.48722660920504 Q8WWM7 ATXN2L Q8WWM7.3.S409.p_ATXN2L Q8WWM7-3_S409s _1_1_409_409 Q8WWM7-3 Q8WWM7-3|H3BUF6|Q8WWM7-2|Q8WWM7-9|Q8WWM7-4|Q8WWM7-5|Q8WWM7-8|Q8WWM7-6 Isoform 3 of Ataxin-2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8491.9268.3 12.71 6.32 3.627 2 1 1 0 580.3085 1658.9412 S409s TMT10 400 (R) GINGGPSRMsPK (A) GINGGPS(0.0)RMS(0.99)PK K:TMT10,s:Phosphorylated S ATXN2L 116093.7 35 13 184.1 476.17 HUMAN 1 1.6905 -12.875 NGGVPWPSPCPSPSS-p Q99700;S554-p NGGVPWPSPCPSPSS 0.466667919827382 0.656531830979053 0.113666666666667 0.06 6.11002317671147 2.49709534691204 0.113666666666667 0.06 0.244905017212292 0.562717556730221 1.30413967585329 0.616196867908261 Q99700 ATXN2 Q99700.S554.p_ATXN2 Q99700_S554sS558s_2_2_554_558 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20090.20090.4 9.41 9.41 1.293 5 2 2 0 677.3171 2546.3135 S554s S558s TMT10 545 (R) VVNGGVPWPsPCPsPSSRPPSR (Y) VVNGGVPWPS(0.99)PCPS(0.99)PS(0.0)S(0.0)RPPS(0.0)R C:Carbamidomethylation,s:Phosphorylated S ATXN2 140907.9 4 24 176.1 481.52 HUMAN 1 6.11 2.4971 NGHLLLNSEKMSKST-p Q9P2J5;S714-p NGHLLLNSEKMSKST 0.894795428292416 0.212984380692182 0.023 -0.124666666666667 0.944716868680144 8.83743165107548 0.023 -0.124666666666667 0.804504195202823 0.130694356540273 0.259953163629082 -1.77959438572595 Q9P2J5 LARS Q9P2J5.S714.p_LARS Q9P2J5_S714s _1_1_714_714 Q9P2J5 Q9P2J5|Q9P2J5-2|Q9P2J5-3 Leucine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13565.13565.3 10.45 7.45 99 1 1 1 0 578.65 1653.9688 S714s TMT10 706 (R) ANGHLLLNsEK (M) ANGHLLLNS(1.0)EK K:TMT10,s:Phosphorylated S LARS 135661.9 1 2 3482.1 49.95 HUMAN 1 0.9447 -8.8374 NGHVTEESDSEVKNV-p Q8N3R9;S14-p NGHVTEESDSEVKNV 0.279555400121424 0.0645346162319406 -0.207333333333333 0.214333333333333 10.463673256511 15.8443995024967 -0.207333333333333 0.214333333333333 0.0898737109411668 0.0260351479359287 -2.06239425523183 3.03625044735499 Q8N3R9 MPP5 Q8N3R9.S14.p_MPP5 Q8N3R9_T11tS14s_2_2_11_14 Q8N3R9 Q8N3R9|G3V2B0 MAGUK p55 subfamily member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6127.6127.3 11.24 11.24 1.696 6 2 2 0 812.328 2259.0397 M6m T11t S14s Acetyl 2 (M) TTSHmNGHVtEEsDSEVK (N) T(0.0)T(0.0)S(0.0)HM(1.0)NGHVT(0.99)EES(0.99)DS(0.0)EVK K:TMT10,m:Oxidized methionine,t:Phosphorylated T,s:Phosphorylated S MPP5 77577.4 2 5 2822.1 69.26 HUMAN 1 -10.4637 15.8444 NGIFDCQSPTSPFMG-p Q86W92-2;S37-p NGIFDCQSPTSPFMG 0.950466896477293 0.327168068270299 0.00966666666666667 0.104333333333333 0.434728318951116 6.42437831741728 0.00966666666666667 0.104333333333333 0.904747034113455 0.22780443153335 0.125382936820234 1.35948245658932 Q86W92 PPFIBP1 Q86W92.2.S37.p_PPFIBP1 Q86W92-2_S37s_1_1_37_37 Q86W92-2 Q86W92|Q86W92-2|Q86W92-4|A0A0A0MTP2|Q86W92-5|F5H0E0 Isoform 2 of Liprin-beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28284.28284.3 21.9 21.9 2.473 6 1 1 0 968.1043 2806.3378 S37s M43m TMT10 25 (K) ALEYSNGIFDCQsPTSPFmGSLR (A) ALEY(0.0)S(0.0)NGIFDCQS(0.99)PT(0.0)S(0.0)PFM(1.0)GS(0.0)LR C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine PPFIBP1 113749.6 7 3 449.1 309.07 HUMAN 1 0.4347 6.4244 NGKAAKNSEEEEEEK-p Q14978-3;S564-p NGKAAKNSEEEEEEK 0.849516481351664 0.335994975696433 0.0356666666666667 0.0916666666666667 1.37076777220267 6.27699924618092 0.0356666666666667 0.0916666666666667 0.729328563717024 0.235667706537421 0.364459260303933 1.33343131680897 Q14978 NOLC1 Q14978.3.S564.p_NOLC1 Q14978-3_S564s_1_1_564_564 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6959.6959.2 16.46 11.33 99 1 1 1 0 1081.0304 2080.1013 N563n S564s TMT10 560 (K) AAKnsEEEEEEK (K) AAKN(1.0)S(1.0)EEEEEEK K:TMT10,n:Deamidated,s:Phosphorylated S NOLC1 73744 39 15 72.1 655.55 HUMAN 1 1.3708 6.277 NGKDWGRSWSDRSIF-p Q86UE4;S339-p NGKDWGRSWSDRSIF 0.8987845085049 0.011867883319295 0.0406666666666667 -0.759666666666667 0.906345778887947 26.9062274095586 0.0406666666666667 -0.759666666666667 0.811643700215269 0.00203881236597651 0.250218402898369 -5.53573285517536 Q86UE4 MTDH Q86UE4.S339.p_MTDH Q86UE4_S339s _1_1_339_339 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13007.13007.5 25.8 20.89 1.118 7 1 1 0 815.9981 3995.9952 S339s TMT10 315 (K) RKTEPSAWSQDTGDANTNGKDWGRsWSDR (S) RKT(0.0)EPS(0.0)AWS(0.0)QDT(0.0)GDANT(0.0)NGKDWGRS(0.99)WS(0.0)DR K:TMT10,s:Phosphorylated S MTDH 63892.9 24 15 77.1 644.48 HUMAN 1 0.9063 -26.9062 NGKELNKSINPDEAV-p P11142;S362-p NGKELNKSINPDEAV 0.109765188029102 0.00354425123931495 -0.946333333333333 1.001 20.082301591192 36.5729736022985 -0.946333333333333 1.001 0.00981227792782519 0.000220141864166029 -3.89663547698152 8.69171759203938 P11142 HSPA8 P11142.S362.p_HSPA8 P11142_S362s _1_1_362_362 P11142 P11142|E9PKE3|E9PNE6|P11142-2|A8K7Q2 Heat shock cognate 71 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37051.37051.3 28.27 29.84 19.766 3 1 1 0 933.4863 2718.4714 S362s TMT10 362 (K) sINPDEAVAYGAAVQAAILSGDK (S) S(0.99)INPDEAVAY(0.0)GAAVQAAILS(0.0)GDK K:TMT10,s:Phosphorylated S HSPA8 71125 3 19 367.1 341.38 HUMAN 1 -20.0823 36.573 NGKLTVASPKRGQKR-p O75179;S1709-p NGKLTVASPKRGQKR 0.723063863780764 0.00392907656920506 -0.0846666666666667 -0.723333333333333 2.6648384861376 35.483991019324 -0.0846666666666667 -0.723333333333333 0.541397382045088 0.00028287912375566 -0.651474453056515 -8.27410492817586 O75179 ANKRD17 O75179.S1709.p_ANKRD17 O75179_S1709s_1_1_1709_1709 O75179 O75179|O75179-2|O75179-7|O75179-6|O75179-4 Ankyrin repeat domain-containing protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17917.17917.3 18.61 15.06 3.43 6 1 1 0 864.8133 2511.475 N1702n S1709s TMT10 1693 (K) SGPSPLSSPnGKLTVAsPK (R) S(0.0)GPS(0.0)PLS(0.0)S(0.0)PN(1.0)GKLT(0.0)VAS(0.99)PK K:TMT10,n:Deamidated,s:Phosphorylated S ANKRD17 276135.9 10 9 287.2 383.69 HUMAN 1 -2.6648 -35.484 NGKNFYESDDDQKEK-p O00203;S276-p NGKNFYESDDDQKEK 0.459299895698651 0.351301380027584 -0.175666666666667 0.104 6.22945958932841 6.02212141945357 -0.175666666666667 0.104 0.238261592971486 0.249912430404575 -1.32533876419629 1.28819588297391 O00203 AP3B1 O00203.S276.p_AP3B1 O00203_S276s _1_1_276_276 O00203 O00203|O00203-3 AP-3 complex subunit beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22601.22601.5 22.31 22.31 4.996 4 1 1 0 864.2217 4237.1019 S276s TMT10 254 (R) TQFVSPWKEGDELEDNGKNFYEsDDDQK (E) T(0.0)QFVS(0.0)PWKEGDELEDNGKNFY(0.0)ES(0.99)DDDQK K:TMT10,s:Phosphorylated S AP3B1 121888.5 33 2 445.1 310.27 HUMAN 1 -6.2295 6.0221 NGKQYIISEELISEG-p Q9UKK9;S19-p NGKQYIISEELISEG 0.354637573366403 0.175636640921577 -0.163 0.196666666666667 8.36732484222628 9.93355800215565 -0.163 0.196666666666667 0.145635588730244 0.101541646164324 -1.69882940262474 1.96937903962154 Q9UKK9 NUDT5 Q9UKK9.S19.p_NUDT5 Q9UKK9_S19s _1_1_19_19 Q9UKK9 A6NFX8|Q9UKK9|A6NJU6|A6NCQ0 ADP-sugar pyrophosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24416.24416.3 12.4 12.4 4.355 3 1 1 0 683.0298 1967.1101 S19s TMT10 15 (K) QYIIsEELISEGK (W) QY(0.0)IIS(0.99)EELIS(0.0)EGK K:TMT10,s:Phosphorylated S NUDT5 24612.4 1 4 3075.1 61.4 HUMAN 1 -8.3673 9.9336 NGLKRTKSVSSMSEF-p O94964-2;S1164-p NGLKRTKSVSSMSEF 0.412161436237322 0.689116683465287 0.112333333333333 0.0403333333333333 7.09930041318576 2.21528480090016 0.112333333333333 0.0403333333333333 0.195015871736763 0.600442631891161 1.47838427668265 0.555900465487352 O94964 SOGA1 O94964.2.S1164.p_SOGA1 O94964-2_S1164s _1_1_1164_1164 O94964-2 O94964-2|O94964-4|X6R3R3|O94964-3 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.35169.35169.4 26.67 26.67 1.171 7 1 1 0 722.5722 2807.3065 S1164s TMT10 1164 (K) sVSSMSEFESLLDCSPYLAGGDAR (G) S(0.99)VS(0.0)S(0.0)MS(0.0)EFES(0.0)LLDCS(0.0)PY(0.0)LAGGDAR C:Carbamidomethylation,s:Phosphorylated S SOGA1 185623.3 12 12 215.1 433.51 HUMAN 1 7.0993 2.2153 NGMAKNGSEADIDEG-p P22314;S46-p NGMAKNGSEADIDEG 0.555897525776823 0.258969354682978 0.0793333333333333 0.121 4.70737401285222 7.7298264180494 0.0793333333333333 0.121 0.33826931091126 0.168662043610353 1.0501492806582 1.5877692936607 P22314 UBA1 P22314.S46.p_UBA1 P22314_S46s _1_1_46_46 P22314 P22314|P22314-2 Ubiquitin-like modifier-activating enzyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13844.13844.3 19.91 19.91 11.804 3 1 1 0 612.2737 1754.8394 S46s TMT10 44 (K) NGsEADIDEGLYSR (Q) NGS(0.99)EADIDEGLY(0.0)S(0.0)R s:Phosphorylated S UBA1 118930.9 8 4 289.1 381.86 HUMAN 1 4.7074 7.7298 NGMGDDGSPPAKKMI-p P12757;S26-p NGMGDDGSPPAKKMI 0.237324586273182 0.0262870555397523 -0.184333333333333 -0.405333333333333 11.9703363148107 21.480113000823 -0.184333333333333 -0.405333333333333 0.0635281734144215 0.00711195008544423 -2.32707418039396 -4.19973974774697 P12757 SKIL P12757.S26.p_SKIL P12757_S26s _1_1_26_26 P12757 P12757|P12757-3|P12757-2|P12757-4 Ski-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12302.12302.3 12.73 12.73 99 1 1 1 0 718.7121 2074.157 S26s TMT10 17 (K) KLNGMGDDGsPPAK (K) KLNGMGDDGS(1.0)PPAK K:TMT10,s:Phosphorylated S SKIL 78229.8 1 1 2963.1 64.59 HUMAN 1 -11.9703 -21.4801 NGMLVTDSAGKQLQR-p P33527-9;S915-p NGMLVTDSAGKQLQR 0.443553897142878 0.825533350414788 0.122 -0.022 6.50692815759599 1.16534448760602 0.122 -0.022 0.223515262719737 0.76465503267643 1.37439639801521 -0.314822394653722 P33527 ABCC1 P33527.9.S915.p_ABCC1 P33527-9_S915s _1_1_915_915 P33527-9 P33527-9|P33527-3|P33527-2|P33527-4|P33527-5|P33527-7|P33527-6|P33527-8|A0A0A0MS99 Isoform 9 of Multidrug resistance-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16449.16449.3 15.64 15.64 1.134 2 1 1 0 673.6611 1939.0029 S915s TMT10 905 (K) QMENGMLVTDsAGK (Q) QMENGMLVT(0.0)DS(0.99)AGK K:TMT10,s:Phosphorylated S ABCC1 174063.4 2 1 3098.1 60.69 HUMAN 1 6.5069 -1.1653 NGNGLKNTPRFKRRR-p Q9NV79;T274-p NGNGLKNTPRFKRRR 0.477957924431391 0.0152656854109665 0.0986666666666667 0.355666666666667 5.89936097233164 25.1253309685314 0.0986666666666667 0.355666666666667 0.257077402263655 0.00307232321975255 1.26661477847887 5.06922104329345 Q9NV79 PCMTD2 Q9NV79.T274.p_PCMTD2 Q9NV79_T274t_1_1_274_274 Q9NV79 Q9NV79|Q9NV79-2|A0A0G2JM70|V9GZ41|Q9NV79-3 Protein-L-isoaspartate O-methyltransferase domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5338.5691.3 9.39 5.42 1.913 1 1 1 0 537.2877 1528.896 N267n T274t TMT10 267 (K) nGNGLKNtPR (F) N(0.99)GN(0.0)GLKN(0.0)T(1.0)PR K:TMT10,n:Deamidated,t:Phosphorylated T PCMTD2 41470.5 4 1 5130.1 22.57 HUMAN 1 5.8994 25.1253 NGNHVANSPVSIMVV-p O75369-8;S2019-p NGNHVANSPVSIMVV 0.684210036869979 0.135639762670616 0.0553333333333333 0.163333333333333 3.09088404977249 11.4341793711786 0.0553333333333333 0.163333333333333 0.4908079571239 0.0718756959542618 0.738812187248762 2.23130442797431 O75369 FLNB O75369.8.S2019.p_FLNB O75369-8_S2019s_1_1_2019_2019 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20959.20959.4 17.98 17.98 1.225 3 1 1 0 766.1445 2980.6039 N2012n S2019s TMT10 2011 (K) KnGNHVANsPVSIMVVQSEIGDAR (R) KN(0.99)GN(0.0)HVAN(0.0)S(0.99)PVS(0.0)IMVVQS(0.0)EIGDAR K:TMT10,n:Deamidated,s:Phosphorylated S FLNB 283797.6 5 32 67.1 680.07 HUMAN 1 3.0909 11.4342 NGNSFDSSGDELDVH-p Q6ZN28;S116-p NGNSFDSSGDELDVH 0.809640283582017 0.050124945718593 0.0406666666666667 0.249 1.76293476543166 17.3724922726257 0.0406666666666667 0.249 0.666356323608885 0.0183126321928226 0.455637809736256 3.33375409592145 Q6ZN28 MACC1 Q6ZN28.S116.p_MACC1 Q6ZN28_S115sS116s_2_2_115_116 Q6ZN28 Q6ZN28 Metastasis-associated in colon cancer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25614.25614.3 24.07 24.07 5.415 3 2 2 0 955.0884 2703.3059 S115s S116s TMT10 106 (R) EIENGNSFDssGDELDVHQLLR (Q) EIENGNS(0.0)FDS(0.99)S(0.99)GDELDVHQLLR s:Phosphorylated S MACC1 97436.1 2 10 744.1 233.51 HUMAN 1 1.7629 17.3725 NGNSTVPSLPDNNAL-p Q9NZJ9-2;S159-p NGNSTVPSLPDNNAL 0.2691739053465 0.159121874454654 0.22 0.142333333333333 10.8082154910047 10.5031145208239 0.22 0.142333333333333 0.0830191821915888 0.0890612011178139 2.12254315881264 2.068386225396 Q9NZJ9 NUDT4 Q9NZJ9.2.S159.p_NUDT4 Q9NZJ9-2_S159s _1_1_159_159 Q9NZJ9-2 Q9NZJ9-2|Q9NZJ9-3|A0A0C4DGJ4 Isoform 2 of Diphosphoinositol polyphosphate phosphohydrolase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30807.30807.4 11.34 11.34 1.267 9 1 1 0 977.9862 3828.9388 S159s TMT10 146 (K) LGCSPANGNSTVPsLPDNNALFVTAAQTSGLPSSVR (-) LGCS(0.0)PANGNS(0.0)T(0.0)VPS(0.99)LPDNNALFVT(0.0)AAQT(0.0)S(0.0)GLPS(0.0)S(0.0)VR C:Carbamidomethylation,s:Phosphorylated S NUDT4 20662 1 2 3810.1 42.64 HUMAN 1 10.8082 10.5031 NGPGENVSEDEAQSS-p Q659C4;S60-p NGPGENVSEDEAQSS 0.28377835512685 0.951382212392482 -0.167333333333333 0.00666666666666669 10.3273536177373 0.309433526796593 -0.167333333333333 0.00666666666666669 0.0927394761123689 0.931229332700952 -2.03864480136616 0.090381128620219 Q659C4 LARP1B Q659C4.S60.p_LARP1B Q659C4_S60s _1_1_60_60 Q659C4 Q659C4|Q659C4-2|Q659C4-9|D6R9W6|G3V0E9|Q659C4-3 La-related protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9588.9588.2 19.62 19.62 5.844 3 1 1 0 1170.5203 2260.0639 S60s TMT10 52 (K) LNGPGENVsEDEAQSSNQR (K) LNGPGENVS(0.99)EDEAQS(0.0)S(0.0)NQR s:Phosphorylated S LARP1B 105833.8 4 1 551.1 274.41 HUMAN 1 -10.3274 0.3094 NGPSGNDTPEELRKK-p Q14527;T736-p NGPSGNDTPEELRKK 0.168098244255547 0.514165156540718 0.259 0.0666666666666667 15.46059363657 3.87697804010278 0.259 0.0666666666666667 0.0284407232499606 0.409545535486993 2.96529057136893 0.893391672519181 Q14527 HLTF Q14527.T736.p_HLTF Q14527_T736t _1_1_736_736 Q14527 Q14527|A0A0C4DGA6 Helicase-like transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18458.18458.5 19.16 17.86 1.154 7 1 1 0 760.7702 3719.8522 T736t TMT10 714 (R) QICCHTYLLTNAVSSNGPSGNDtPEELRK (K) QICCHT(0.0)Y(0.0)LLT(0.0)NAVS(0.0)S(0.0)NGPS(0.0)GNDT(0.99)PEELRK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T HLTF 114953.6 4 5 1484.1 138.09 HUMAN 1 15.4606 3.877 NGPVAGASRQENGAS-p E9PRY8;S453-p NGPVAGASRQENGAS 0.957810192524261 0.109998904589957 -0.00966666666666668 -0.209666666666667 0.364710876419868 12.6599563471517 -0.00966666666666667 -0.209666666666667 0.919451683574767 0.0542006338318318 -0.105933167624104 -2.44866792711707 E9PRY8 NotFound E9PRY8.S453.p_NotFound E9PRY8_S453s _1_1_453_453 E9PRY8 E9PRY8|P29692-2|A0A087X1X7|P29692-4|E9PMW7 Elongation factor 1-delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20834.20834.3 13.87 13.87 1.184 3 1 1 0 968.4745 2823.4409 S453s TMT10 441 (R) FYEQMNGPVAGAsRQENGASVILR (D) FY(0.0)EQMNGPVAGAS(0.99)RQENGAS(0.0)VILR s:Phosphorylated S EEF1D 77196.2 2 3 369.1 339.47 HUMAN 1 -0.3647 -12.66 NGQPRRRSIQDLTVT-p O43318;S439-p NGQPRRRSIQDLTVT 0.898522472312718 0.452734613054459 -0.0243333333333333 0.0796666666666667 0.910469485470004 4.58611034787533 -0.0243333333333333 0.0796666666666667 0.810873395249148 0.347847563120364 -0.251267364325955 1.027440065465 O43318 MAP3K7 O43318.S439.p_MAP3K7 O43318_S439s _1_1_439_439 O43318 O43318|O43318-2|O43318-3|O43318-4|Q9UG54 Mitogen-activated protein kinase kinase kinase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18093.18093.2 16.73 16.73 6.195 6 1 1 0 1092.5414 2104.1083 S439s TMT10 439 (R) sIQDLTVTGTEPGQVSSR (S) S(0.99)IQDLT(0.0)VT(0.0)GT(0.0)EPGQVS(0.0)S(0.0)R s:Phosphorylated S MAP3K7 67936.6 4 8 1139.1 173.29 HUMAN 1 -0.9105 4.5861 NGRDLNKSINPDEAV-p A0A0G2JIW1;S363-p NGRDLNKSINPDEAV 0.12869352151856 0.0125557733612715 -0.506333333333333 0.513666666666667 18.4468113057554 26.5156607477118 -0.506333333333334 0.513666666666667 0.0142994347196697 0.00223066280241658 -3.55326247188255 5.43085607184757 A0A0G2JIW1 NotFound A0A0G2JIW1.S363.p_NotFound A0A0G2JIW1_S363s _1_1_363_363 A0A0G2JIW1 A0A0G2JIW1|P0DMV8 Heat shock 70 kDa protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37401.37401.3 28.84 28.71 19.059 2 1 1 0 948.1557 2762.4799 S363s TMT10 363 (K) sINPDEAVAYGAAVQAAILMGDK (S) S(0.99)INPDEAVAY(0.0)GAAVQAAILMGDK K:TMT10,s:Phosphorylated S HSPA1B 70393.3 2 2 367.3 341.38 HUMAN 1 -18.4468 26.5157 NGRPRSNSWQGNLGG-p Q9P0K1-2;S798-p NGRPRSNSWQGNLGG 0.830607885532595 0.616045489367816 0.0366666666666667 0.0666666666666667 1.55236884583515 2.85943577797587 0.0366666666666667 0.0666666666666667 0.69946037343442 0.517674082205458 0.407219178182547 0.691620102058645 Q9P0K1 ADAM22 Q9P0K1.2.S798.p_ADAM22 Q9P0K1-2_S798s _1_1_798_798 Q9P0K1-2 Q9P0K1|Q9P0K1-2|Q9P0K1-5|Q9P0K1-3|Q9P0K1-4 Isoform 2 of Disintegrin and metalloproteinase domain-containing protein 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13690.13690.2 15.6 15.6 2.298 2 1 1 0 900.4424 1719.9179 S798s TMT10 796 (R) SNsWQGNLGGNK (K) S(0.0)NS(0.99)WQGNLGGNK K:TMT10,s:Phosphorylated S ADAM22 102891.3 5 2 3750.1 43.91 HUMAN 1 1.5524 2.8594 NGRTRAYSGSDLPSS-p Q8NHG8;S19-p NGRTRAYSGSDLPSS 0.282495710935346 0.339163336251596 0.239666666666667 0.132666666666667 10.3800412494278 6.22080472517461 0.239666666666667 0.132666666666667 0.0916211787872007 0.238736887484269 2.04782094857792 1.32347855506336 Q8NHG8 ZNRF2 Q8NHG8.S19.p_ZNRF2 Q8NHG8_S19s _1_1_19_19 Q8NHG8 Q8NHG8 E3 ubiquitin-protein ligase ZNRF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9287.9287.2 19.9 18 1.135 8 1 1 0 1254.0545 2427.1334 S19s TMT10 17 (R) AYsGSDLPSSSSGGANGTAGGGGGAR (A) AY(0.0)S(0.99)GS(0.0)DLPS(0.0)S(0.0)S(0.0)S(0.0)GGANGT(0.0)AGGGGGAR s:Phosphorylated S ZNRF2 24627.8 9 1 1463.1 140.17 HUMAN 1 10.38 6.2208 NGSHTEITPEAKTKS-p Q12955;T4258-p NGSHTEITPEAKTKS 0.258916476664751 0.0189048018409854 -0.247333333333333 -0.371 11.1528770765171 23.7112688500877 -0.247333333333333 -0.371 0.0766853302708179 0.00425474086961791 -2.18291400569359 -4.71911430529763 Q12955 ANK3 Q12955.T4258.p_ANK3 Q12955_T4258t_1_1_4258_4258 Q12955 Q12955|Q12955-4|Q12955-5|Q12955-7|Q12955-6 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12033.12374.4 18.88 18.88 4.881 3 1 1 0 711.1127 2760.4771 N4251n T4258t TMT10 4243 (K) GEAGKFEAnGSHTEItPEAK (T) GEAGKFEAN(1.0)GS(0.0)HT(0.0)EIT(0.99)PEAK K:TMT10,n:Deamidated,t:Phosphorylated T ANK3 482683.6 5 29 135.1 530.51 HUMAN 1 -11.1529 -23.7113 NGSHVVGSPFKVRVG-p O75369-8;S2400-p NGSHVVGSPFKVRVG 0.501543218705079 0.00605456056815993 0.115666666666667 -0.53 5.52766481991554 32.0125065122913 0.115666666666667 -0.53 0.280048672282115 0.000629142970841152 1.19993702522008 -7.05639917219252 O75369 FLNB O75369.8.S2400.p_FLNB O75369-8_S2400s _1_1_2400_2400 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16851.16851.3 10.03 9.13 8.943 2 1 1 0 605.3194 1733.9739 S2400s TMT10 2392 (K) FNGSHVVGsPFK (V) FNGS(0.0)HVVGS(0.99)PFK K:TMT10,s:Phosphorylated S FLNB 283797.6 2 39 67.1 680.07 HUMAN 1 5.5277 -32.0125 NGSLLMVSDSERTTE-p Q6P0N0;S304-p NGSLLMVSDSERTTE 0.517317056020968 0.031288871953712 0.0903333333333333 -0.39 5.286277996607 20.3237810041899 0.0903333333333333 -0.39 0.296054863775352 0.00928157972808103 1.15627081420313 -3.94501634930464 Q6P0N0 MIS18BP1 Q6P0N0.S304.p_MIS18BP1 Q6P0N0_S304s _1_1_304_304 Q6P0N0 Q6P0N0|G5E9K5|Q6P0N0-2 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14573.14648.3 16.07 13.04 3.135 7 1 1 0 936.1274 2726.4031 S304s TMT10 297 (K) NGSLLMVsDSERTTEGTSQQK (V) NGS(0.0)LLMVS(0.99)DS(0.0)ERT(0.0)T(0.0)EGT(0.0)S(0.0)QQK K:TMT10,s:Phosphorylated S MIS18BP1 129996 2 14 54.1 728.39 HUMAN 1 5.2863 -20.3238 NGSSGSPSPGDTLPW-p Q15149-2;S24-p NGSSGSPSPGDTLPW 0.531228942694481 0.0557634476995554 0.0976666666666667 -0.223333333333333 5.08370691712341 16.7026793711895 0.0976666666666667 -0.223333333333333 0.310191082432755 0.0213664348483002 1.11937594789091 -3.20191547903661 Q15149 PLEC Q15149.2.S24.p_PLEC Q15149-2_S24s _1_1_24_24 Q15149-2 Q15149-2|Q15149-3 Isoform 2 of Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26994.26994.3 22.12 22.12 2.156 7 1 1 0 1032.8353 3016.5264 S24s TMT10 10 (R) AVSEDVSNGSSGSPsPGDTLPWNLGK (T) AVS(0.0)EDVS(0.0)NGS(0.0)S(0.0)GS(0.0)PS(0.99)PGDT(0.0)LPWNLGK K:TMT10,s:Phosphorylated S PLEC 520403 4 53 44.2 794.85 HUMAN 1 5.0837 -16.7027 NGSVSDISPVQAAKK-p O00139-4;S140-p NGSVSDISPVQAAKK 0.885069082704287 0.00362308686222021 0.029 -0.662666666666667 1.04759007122659 36.290894978639 0.029 -0.662666666666667 0.785671487969448 0.000234914866675229 0.285773660658877 -8.58180141654559 O00139 KIF2A O00139.4.S140.p_KIF2A O00139-4_S140s _1_1_140_140 O00139-4 O00139-4|O00139-5|O00139-1 Isoform 4 of Kinesin-like protein KIF2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13842.13842.4 25.64 25.64 2.006 7 1 1 0 885.6937 3459.7868 S140s TMT10 118 (R) ARPSQFPEQSSSAQQNGSVSDIsPVQAAK (K) ARPS(0.0)QFPEQS(0.0)S(0.0)S(0.0)AQQNGS(0.0)VS(0.0)DIS(0.99)PVQAAK K:TMT10,s:Phosphorylated S KIF2A 84772.1 9 4 1020.1 187.91 HUMAN 1 1.0476 -36.2909 NGTEPHTSDEEVEQI-p O43295;S740-p NGTEPHTSDEEVEQI 0.600746876542819 0.00404124447761282 -0.114 0.651666666666667 4.08721407551212 35.2594191775647 -0.114 0.651666666666667 0.3901922080094 0.000297891480079407 -0.933764356093155 8.19020679956238 O43295 SRGAP3 O43295.S740.p_SRGAP3 O43295_T739tS740s_2_2_739_740 O43295 O43295|O43295-2 SLIT-ROBO Rho GTPase-activating protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22163.22163.4 24.81 24.04 1.375 6 2 2 0 1394.0759 5413.3731 T739t S740s TMT10 708 (K) CMAGGEEYCDSPHSEPGAIDEVDHDNGTEPHtsDEEVEQIEAIAK (F) CMAGGEEY(0.0)CDS(0.0)PHS(0.0)EPGAIDEVDHDNGT(0.0)EPHT(0.99)S(0.99)DEEVEQIEAIAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S SRGAP3 125471.5 3 15 754.1 231.27 HUMAN 1 -4.0872 35.2594 NGTHIPGSPFKIRVG-p P21333-2;S2406-p NGTHIPGSPFKIRVG 0.337362550356468 0.214427967317373 -0.199666666666667 -0.142333333333333 8.79281154770066 8.79921697097453 -0.199666666666667 -0.142333333333333 0.132044052696328 0.131849444048293 -1.77249827883019 -1.77298477125868 P21333 FLNA P21333.2.S2406.p_FLNA P21333-2_S2406s _1_1_2406_2406 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54|A0A087WWY3 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18914.18914.3 14.65 14.65 9.076 2 1 1 0 613.9905 1759.9896 S2406s TMT10 2398 (K) FNGTHIPGsPFK (I) FNGT(0.0)HIPGS(0.99)PFK K:TMT10,s:Phosphorylated S FLNA 282751.6 2 20 198.1 454.47 HUMAN 1 -8.7928 -8.7992 NGTLNKHSGIDFKQL-p A0A0A0MTH3;S217-p NGTLNKHSGIDFKQL 0.05761714183061 0.009577130780458 -0.526 -0.535 27.0325815723843 28.4671042925645 -0.526 -0.535 0.00198034949867193 0.00142327745711497 -5.57768105207061 -5.97012675078412 A0A0A0MTH3 NotFound A0A0A0MTH3.S217.p_NotFound A0A0A0MTH3_S217s_1_1_217_217 A0A0A0MTH3 A0A0A0MTH3|Q13418|Q13418-3 Integrin-linked protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13930.13930.4 10.76 10.76 2.223 2 1 1 0 550.5502 2118.2275 N210n S217s TMT10 210 (R) nGTLNKHsGIDFK (Q) N(0.99)GT(0.0)LN(0.0)KHS(0.99)GIDFK K:TMT10,n:Deamidated,s:Phosphorylated S ILK 55295.7 3 1 6590.1 10.76 HUMAN 1 -27.0326 -28.4671 NGTSGSDSPGQAVEA-p Q05D32;S165-p NGTSGSDSPGQAVEA 0.957671660631549 0.667109092738338 0.00799999999999999 -0.0456666666666666 0.366564201725156 2.40589472721649 0.00799999999999999 -0.0456666666666667 0.919059396866128 0.574659416146775 0.106451390290192 -0.596850748561065 Q05D32 CTDSPL2 Q05D32.S165.p_CTDSPL2 Q05D32_S165s _1_1_165_165 Q05D32 Q05D32 CTD small phosphatase-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18089.18089.2 20.43 20.43 1.811 4 1 1 0 1257.1094 2433.2509 S165s TMT10 158 (K) NGTSGSDsPGQAVEAEEIVK (Q) NGT(0.0)S(0.0)GS(0.0)DS(0.99)PGQAVEAEEIVK K:TMT10,s:Phosphorylated S CTDSPL2 53168.9 5 9 899.1 203.79 HUMAN 1 0.3666 -2.4059 NGTSSPQSPLSTSGR-p Q96KQ4;S335-p NGTSSPQSPLSTSGR 0.274481083437932 0.00802402610824903 -0.234666666666667 -0.482 10.6247730271933 29.8638488488652 -0.234666666666667 -0.482 0.0866009581933997 0.00103184654685961 -2.09049536897992 -6.38075248525684 Q96KQ4 PPP1R13B Q96KQ4.S335.p_PPP1R13B Q96KQ4_S335s _1_1_335_335 Q96KQ4 Q96KQ4 Apoptosis-stimulating of p53 protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8833.8833.2 19.04 19.04 2.857 7 1 1 0 942.4573 1803.9398 S335s TMT10 327 (R) VNGTSSPQsPLSTSGR (V) VNGT(0.0)S(0.0)S(0.0)PQS(0.99)PLS(0.0)T(0.0)S(0.0)GR s:Phosphorylated S PPP1R13B 120133.8 2 2 1161.1 171.12 HUMAN 1 -10.6248 -29.8638 NGVAAEVSPAKEENP-p Q9BW71;S125-p NGVAAEVSPAKEENP 0.729035669255208 0.165731195607876 0.053 -0.143 2.60530554732159 10.2648522506132 0.053 -0.143 0.548869938575003 0.0940837837316173 0.639038404450646 -2.0269199888963 Q9BW71 HIRIP3 Q9BW71.S125.p_HIRIP3 Q9BW71_S125s _1_1_125_125 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9169.9169.3 16.89 12.56 99 1 1 1 0 736.0471 2126.1606 S125s TMT10 118 (K) NGVAAEVsPAKEENPR (R) NGVAAEVS(1.0)PAKEENPR K:TMT10,s:Phosphorylated S HIRIP3 62298.3 13 5 178.1 481.23 HUMAN 1 2.6053 -10.2649 NGVKLQRSPDRVLEN-p Q9ULD4;S943-p NGVKLQRSPDRVLEN 0.878443024385905 0.206617265962249 0.043 0.130666666666667 1.10572948548867 9.00889146163142 0.043 0.130666666666667 0.77522371790804 0.125635060675618 0.300193256194616 1.80925052941155 Q9ULD4 BRPF3 Q9ULD4.S943.p_BRPF3 Q9ULD4_S943s _1_1_943_943 Q9ULD4 Q9ULD4|E9PI60 Bromodomain and PHD finger-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3807.3807.3 7.98 1.85 99 1 1 1 0 394.2067 1100.6374 S943s TMT10 940 (K) LQRsPDR (V) LQRS(1.0)PDR s:Phosphorylated S BRPF3 137397.1 1 4 1814.1 113.02 HUMAN 1 1.1057 9.0089 NGVNCEHSPVDLSKV-p Q2Y0W8;S279-p NGVNCEHSPVDLSKV 0.53706412572523 0.582530915684762 -0.0866666666666667 -0.0713333333333333 4.99260879250124 3.16781935400051 -0.0866666666666667 -0.0713333333333333 0.316766408614879 0.482189850304628 -1.10270344734368 -0.754187669938598 Q2Y0W8 SLC4A8 Q2Y0W8.S279.p_SLC4A8 Q2Y0W8_S279s _1_1_279_279 Q2Y0W8 Q2Y0W8|Q2Y0W8-2|Q2Y0W8-3|Q2Y0W8-5|Q2Y0W8-4|Q2Y0W8-7 Electroneutral sodium bicarbonate exchanger 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10277.10277.3 14.23 14.23 6.478 2 1 1 0 698.6732 2014.0428 S279s TMT10 272 (K) NGVNCEHsPVDLSK (V) NGVNCEHS(0.99)PVDLS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLC4A8 124418.9 1 2 3282.1 55.15 HUMAN 1 -4.9926 -3.1678 NGYENPTYKFFEQMQ-p P05067;Y762-p NGYENPTYKFFEQMQ 0.827524141000594 0.0829283633876042 0.038 -0.188666666666667 1.58195699814032 14.3151383801759 0.038 -0.188666666666667 0.694711199429385 0.0370242408099471 0.414095528398823 -2.74926981058011 P05067 APP P05067.Y762.p_APP P05067_Y762y _1_1_762_762 P05067 P05067|P05067-9|P05067-8|P05067-11|P05067-7|P05067-6|E9PG40|P05067-5|P05067-4|P05067-3|A0A0A0MRG2|P05067-10 Amyloid-beta A4 protein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.13031.13151.3 18.88 10.14 2.885 3 1 1 0 670.9841 1930.9733 Y762y TMT10 752 (K) MQQNGYENPTyK (F) MQQNGY(0.0)ENPT(0.0)Y(0.99)K K:TMT10,y:Phosphorylated Y APP 87968.7 3 3 176.1 19.62 HUMAN 1 1.582 -14.3151 NHAAEEASSEDEEEE-p Q7Z6Z7;S726-p NHAAEEASSEDEEEE 0.82642168732256 0.0244383221956364 -0.0463333333333333 0.416666666666667 1.59707003652935 21.951335543856 -0.0463333333333334 0.416666666666667 0.692297871485497 0.00638067237364732 -0.417598410012439 4.30626909175822 Q7Z6Z7 HUWE1 Q7Z6Z7.S726.p_HUWE1 Q7Z6Z7_S726sS727s_2_2_726_727 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19191.19191.5 24.96 24.96 0 8 2 2 0 1069.2449 5181.242 S726s S727s N747n TMT10 718 (R) SNHAAEEAssEDEEEEEVQAMQSFNSTQQnETEPNQQVVGTEER (I) S(0.0)N(0.0)HAAEEAS(0.99)S(0.99)EDEEEEEVQAMQS(0.0)FN(0.50)S(0.0)T(0.0)QQN(0.50)ET(0.0)EPN(0.0)QQVVGT(0.0)EER s:Phosphorylated S,n:Deamidated HUWE1 485818.9 4 66 11.1 1210.45 HUMAN 1 -1.5971 21.9513 NHDSRLWSLERELDD-p O60437;S1614-p NHDSRLWSLERELDD 0.0812167115980618 0.0010212605030329 -0.861666666666667 -1.199 23.3032233395299 51.4888269025441 -0.861666666666667 -1.199 0.00467388116428593 7.09769461927234e-06 -4.62647729439557 -16.7352589390648 O60437 PPL O60437.S1614.p_PPL O60437_S1614s _1_1_1614_1614 O60437 O60437|K7EKI8 Periplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.32962.32962.3 13.01 6.87 99 1 1 1 0 685.703 1975.1264 S1614s TMT10 1612 (R) LWsLERELDDLK (R) LWS(1.0)LERELDDLK K:TMT10,s:Phosphorylated S PPL 205313.7 2 5 2268.1 90.52 HUMAN 1 -23.3032 -51.4888 NHETDGGSAHGDDDD-p P49792;S1160-p NHETDGGSAHGDDDD 0.998180995519267 0.00627124365275306 -0.000666666666666677 0.541666666666667 0.0161985214512029 31.7282869630597 -0.000666666666666659 0.541666666666667 0.996277099838547 0.000671693744455854 -0.00488537612891795 6.96380299487794 P49792 RANBP2 P49792.S1160.p_RANBP2 P49792_S1160s _1_1_1160_1160 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21507.21957.5 24.09 24.09 1.164 2 1 1 0 862.0172 4226.0881 S1160s TMT10 1153 (K) NHETDGGsAHGDDDDDGPHFEPVVPLPDKIEVK (T) NHET(0.0)DGGS(0.99)AHGDDDDDGPHFEPVVPLPDKIEVK K:TMT10,s:Phosphorylated S RANBP2 362585.9 6 19 9.1 1298.62 HUMAN 1 -0.0162 31.7283 NHFGRSMSVEKIDIS-p P49959;S158-p NHFGRSMSVEKIDIS 0.377681694299887 0.101622256507743 0.174 -0.304666666666667 7.81772105709576 13.1176691811828 0.174 -0.304666666666667 0.165282888604856 0.0487790212416786 1.60352335407675 -2.53088840227516 P49959 MRE11A P49959.S158.p_MRE11A P49959_S158s _1_1_158_158 P49959 P49959-3|F8W7U8|P49959-2|F5GXT0 Double-strand break repair protein MRE11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28316.28316.3 16.99 16.99 1.117 3 1 1 0 852.157 2474.4871 S158s TMT10 156 (R) SMsVEKIDISPVLLQK (G) S(0.0)MS(0.99)VEKIDIS(0.0)PVLLQK K:TMT10,s:Phosphorylated S MRE11 80934.2 2 2 588.1 264.48 HUMAN 1 7.8177 -13.1177 NHGQADHSPSMTATH-p Q9Y3L3;S262-p NHGQADHSPSMTATH 0.370192328842819 0.957997702549584 0.141666666666667 -0.00566666666666663 8.0032714115191 0.268274290929348 0.141666666666667 -0.00566666666666663 0.158369978896181 0.940096792464073 1.63572811060177 -0.0786965244880961 Q9Y3L3 SH3BP1 Q9Y3L3.S262.p_SH3BP1 Q9Y3L3_S262s_1_1_262_262 Q9Y3L3 Q9Y3L3|Q6ZT62|Q6ZT62-2|Q9Y3L3-2 SH3 domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22283.22283.5 26.6 26.6 2.608 8 1 1 0 758.1599 3705.8241 N255n S262s TMT10 241 (R) SLSSLDTALAELREnHGQADHsPSMTATHFPR (V) S(0.0)LS(0.0)S(0.0)LDT(0.0)ALAELREN(1.0)HGQADHS(0.99)PS(0.0)MT(0.0)AT(0.0)HFPR n:Deamidated,s:Phosphorylated S SH3BP1 76054.2 6 1 1166.1 170.58 HUMAN 1 8.0033 -0.2683 NHILHKGSHHERKIR-p Q92636-2;S77-p NHILHKGSHHERKIR 0.271901508728479 0.30382626656411 -0.315 -0.141666666666667 10.7166460915667 6.83213572827924 -0.315 -0.141666666666667 0.0847881951735695 0.207389338889864 -2.10653894988676 -1.43121032310915 Q92636 NSMAF Q92636.2.S77.p_NSMAF Q92636-2_S77s _1_1_77_77 Q92636-2 Q92636-2 Isoform 2 of Protein FAN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3665.3665.5 9.88 9.88 99 1 1 1 0 415.6231 1994.1197 S77s TMT10 69 (R) ANHILHKGsHHER (K) ANHILHKGS(1.0)HHER K:TMT10,s:Phosphorylated S NSMAF 108452.7 1 1 4202.1 35.52 HUMAN 1 -10.7166 -6.8321 NHISRAPSPASFQRS-p Q8NFD5-3;S1595-p NHISRAPSPASFQRS 0.833073343145331 0.409108228991378 -0.069 0.162 1.52931665236935 5.16676834079488 -0.069 0.162 0.703182954631451 0.304314864210693 -0.401844686499315 1.13429749569522 Q8NFD5 ARID1B Q8NFD5.3.S1595.p_ARID1B Q8NFD5-3_S1595s _1_1_1595_1595 Q8NFD5-3 Q8NFD5-3|Q8NFD5-2|A0A1B0GVK1|Q8NFD5-4 Isoform 3 of AT-rich interactive domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10164.10164.2 8.34 4.76 1.427 2 1 1 0 635.3134 1189.6527 S1595s TMT10 1593 (R) APsPASFQR (S) APS(0.99)PAS(0.0)FQR s:Phosphorylated S ARID1B 242543.1 2 12 656.1 253.59 HUMAN 1 -1.5293 5.1668 NHKLQDASAEVERLR-p Q10589;S131-p NHKLQDASAEVERLR 0.238728055949939 0.109596239818231 0.532333333333333 -0.397333333333333 11.8990973820266 12.682490883841 0.532333333333333 -0.397333333333333 0.064578843282985 0.053920127642895 2.31444998405661 -2.45270120077532 Q10589 BST2 Q10589.S131.p_BST2 Q10589_S131s _1_1_131_131 Q10589 Q10589|Q10589-2 Bone marrow stromal antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26209.26209.5 21.75 21.75 5.061 3 1 1 0 721.9883 3525.9368 S131s TMT10 112 (K) KVEELEGEITTLNHKLQDAsAEVER (L) KVEELEGEIT(0.0)T(0.0)LNHKLQDAS(0.99)AEVER K:TMT10,s:Phosphorylated S BST2 20053.8 3 1 4241.1 34.91 HUMAN 1 11.8991 -12.6825 NHKSKLSSLQDLEKT-p Q99996-6;S1339-p NHKSKLSSLQDLEKT 0.880906925284752 0.236497730829995 0.0293333333333333 0.117333333333333 1.08424726601711 8.24693854062653 0.0293333333333333 0.117333333333333 0.779067833541837 0.149729076495764 0.294879478760899 1.67742381028304 Q99996 AKAP9 Q99996.6.S1339.p_AKAP9 Q99996-6_S1339s _1_1_1339_1339 Q99996-6 Q99996-6|A0A087WX84 Isoform 6 of A-kinase anchor protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21870.21870.2 9.42 2.9 1.154 2 1 1 0 785.928 1490.883 S1339s TMT10 1337 (K) LSsLQDLEK (T) LS(0.0)S(0.99)LQDLEK K:TMT10,s:Phosphorylated S AKAP9 457697.2 3 3 1721.1 119.49 HUMAN 1 1.0842 8.2469 NHNGSPLSIKEAPKE-p P11172;S217-p NHNGSPLSIKEAPKE 0.0969394664773803 0.417265289111672 0.632333333333333 -0.077 21.4951752864802 5.04882074120526 0.632333333333334 -0.077 0.00708732700569063 0.312692832037699 4.20743358950309 -1.11277052052242 P11172 UMPS P11172.S217.p_UMPS P11172_S214sS217s_2_2_214_217 P11172 P11172|P11172-3|E9PFD2|P11172-2|P11172-4 Uridine 5'-monophosphate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26331.26331.4 15.85 10.96 99 2 2 2 0 865.2025 3297.8563 S214s S217s TMT10 200 (R) FIQENVFVAANHNGsPLsIKEAPK (E) FIQENVFVAANHNGS(1.0)PLS(1.0)IKEAPK K:TMT10,s:Phosphorylated S UMPS 52677.1 5 3 2067.1 99.58 HUMAN 1 21.4952 -5.0488 NHQEGTSSDDELPSA-p P16383;S430-p NHQEGTSSDDELPSA 0.887870336785331 0.0962052435679228 0.0203333333333333 -0.237666666666667 1.00527419837475 13.4438165099652 0.0203333333333333 -0.237666666666667 0.793364164952072 0.0452499755630556 0.275200881812314 -2.58987694431096 P16383 GCFC2 P16383.S430.p_GCFC2 P16383_S429sS430s_2_2_429_430 P16383 P16383|P16383-2 GC-rich sequence DNA-binding factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26546.26546.5 12.21 12.21 1.207 5 2 2 0 746.1296 3566.6779 S429s S430s TMT10 417 (R) VLSGNCNHQEGTssDDELPSAEMIDFQK (S) VLS(0.0)GNCNHQEGT(0.0)S(0.99)S(0.99)DDELPS(0.0)AEMIDFQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GCFC2 89953.6 2 7 2330.1 87.66 HUMAN 1 1.0053 -13.4438 NHRHWNGSFHSRKGC-p Q9HC44;S123-p NHRHWNGSFHSRKGC 0.864901984525087 0.0663695799041653 0.0296666666666667 -0.222666666666667 1.22530805051998 15.6692057504965 0.0296666666666667 -0.222666666666667 0.754169899733965 0.0271068732439751 0.32947733507497 -3.00286125176302 Q9HC44 GPBP1L1 Q9HC44.S123.p_GPBP1L1 Q9HC44_S123s _1_1_123_123 Q9HC44 Q9HC44 Vasculin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5746.5746.3 11.75 11.75 4.427 2 1 1 0 479.5521 1356.6759 S123s TMT10 119 (R) HWNGsFHSR (K) HWNGS(0.99)FHS(0.0)R s:Phosphorylated S GPBP1L1 52642.9 1 3 2370.1 86.31 HUMAN 1 1.2253 -15.6692 NHRKLARSCHDLDLL-p Q9P0V3;S296-p NHRKLARSCHDLDLL 0.430483803415298 0.136037279018009 -0.115333333333333 0.177666666666667 6.74031949775389 11.4153351496593 -0.115333333333333 0.177666666666667 0.2118205299345 0.0721882452352838 -1.41547648142085 2.22799076996372 Q9P0V3 SH3BP4 Q9P0V3.S296.p_SH3BP4 Q9P0V3_S296s _1_1_296_296 Q9P0V3 Q9P0V3|Q9P0V3-2 SH3 domain-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25128.25128.4 21.56 19.94 6.468 4 1 1 0 973.7377 3811.9624 S296s TMT10 293 (K) LARsCHDLDLLGQSPGWGQTQAVETNIVCK (L) LARS(0.99)CHDLDLLGQS(0.0)PGWGQT(0.0)QAVET(0.0)NIVCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SH3BP4 108463.7 7 12 782.1 225.91 HUMAN 1 -6.7403 11.4153 NHRKVPCSPDFQRVT-p Q68DQ2;S395-p NHRKVPCSPDFQRVT 0.787518209872559 0.100088196839069 0.0476666666666667 -0.197333333333333 2.00324242804155 13.2103198633052 0.0476666666666667 -0.197333333333333 0.630486449648304 0.047749410432596 0.509519979525781 -2.54761051198228 Q68DQ2 CRYBG3 Q68DQ2.S395.p_CRYBG3 Q68DQ2_S395s _1_1_395_395 Q68DQ2 Q68DQ2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10266.10266.3 10.34 10.34 99 1 1 1 0 591.3032 1691.9303 S395s TMT10 391 (R) KVPCsPDFQR (V) KVPCS(1.0)PDFQR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CRYBG3 333308.2 6 4 582.1 265.87 HUMAN 1 2.0032 -13.2103 NHRSPLNSCKDPYGG-p Q8N4S9;S132-p NHRSPLNSCKDPYGG 0.441027182521617 0.308450606817273 -0.109 -0.126666666666667 6.54725244743866 6.75120237567696 -0.109 -0.126666666666667 0.221449526110534 0.211290398610526 -1.38150536323416 -1.41701066191591 Q8N4S9 MARVELD2 Q8N4S9.S132.p_MARVELD2 Q8N4S9_S132s _1_1_132_132 Q8N4S9 Q8N4S9|Q8N4S9-3|Q8N4S9-2|A1BQX2 MARVEL domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14283.14283.3 8.53 3.98 2.852 7 1 1 0 895.418 2604.2764 S132s TMT10 128 (R) SPLNsCKDPYGGSEGTFSSR (K) S(0.0)PLNS(0.99)CKDPY(0.0)GGS(0.0)EGT(0.0)FS(0.0)S(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MARVELD2 64623.4 1 4 1043.1 184.85 HUMAN 1 -6.5473 -6.7512 NHSSRRGSLQAYTFE-p P46934;S747-p NHSSRRGSLQAYTFE 0.673736226594446 0.12007937527325 -0.058 0.225333333333333 3.21493586990893 12.1369880147977 -0.058 0.225333333333333 0.476986857493255 0.0611365881681691 -0.763740103957934 2.35546513831397 P46934 NEDD4 P46934.S747.p_NEDD4 P46934_S747s _1_1_747_747 P46934 P46934|P46934-2|P46934-3|P46934-4 E3 ubiquitin-protein ligase NEDD4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30323.30323.5 25.39 20.54 1.602 7 1 1 0 919.668 4514.3608 S747s TMT10 745 (R) RGsLQAYTFEEQPTLPVLLPTSSGLPPGWEEKQDER (G) RGS(0.99)LQAY(0.0)T(0.0)FEEQPT(0.0)LPVLLPT(0.0)S(0.0)S(0.0)GLPPGWEEKQDER K:TMT10,s:Phosphorylated S NEDD4 150367 17 2 2454.1 82.74 HUMAN 1 -3.2149 12.137 NHTGSPRSPSTTYLH-p Q13111;S775-p NHTGSPRSPSTTYLH 0.712189020826308 0.0395518540716135 -0.0563333333333333 -0.286 2.77335686459984 18.8156595933879 -0.0563333333333333 -0.286 0.528036949612315 0.0131351198756284 -0.67399019379913 -3.62612206140238 Q13111 CHAF1A Q13111.S775.p_CHAF1A Q13111_S775s _1_1_775_775 Q13111 Q13111 Chromatin assembly factor 1 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17523.17523.3 20.49 16.49 1.17 9 1 1 0 913.4601 2658.4027 S775s TMT10 775 (R) sPSTTYLHTPTPSEDAAIPSK (S) S(0.99)PS(0.0)T(0.0)T(0.0)Y(0.0)LHT(0.0)PT(0.0)PS(0.0)EDAAIPS(0.0)K K:TMT10,s:Phosphorylated S CHAF1A 108122.1 4 14 633.1 256.49 HUMAN 1 -2.7734 -18.8157 NHVAKQQSEEAFPQE-p O94923;S73-p NHVAKQQSEEAFPQE 0.198145257676753 0.0970217463108242 0.724666666666667 -0.403666666666667 13.7048372775951 13.3976726766044 0.724666666666667 -0.403666666666667 0.0426104648665721 0.0457333202427251 2.63888420027154 -2.58150994375024 O94923 GLCE O94923.S73.p_GLCE O94923_S73s _1_1_73_73 O94923 O94923|H0YNP1 D-glucuronyl C5-epimerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19943.19943.4 17.43 12.18 8.719 3 1 1 0 939.4801 3674.9382 S73s TMT10 71 (K) QQsEEAFPQEQQKAPPVVGGFNSNVGSK (V) QQS(0.99)EEAFPQEQQKAPPVVGGFNS(0.0)NVGS(0.0)K K:TMT10,s:Phosphorylated S GLCE 70442 1 1 5655.1 17.43 HUMAN 1 13.7048 -13.3977 NHYYRNNSFTAPSTV-p O95453;S557-p NHYYRNNSFTAPSTV 0.177928026787036 0.228301002683181 0.218 -0.143333333333333 14.8526764499235 8.45008919195383 0.218 -0.143333333333333 0.0327139025019582 0.142886461332239 2.8508659166004 -1.71258836011147 O95453 PARN O95453.S557.p_PARN O95453_S557s _1_1_557_557 O95453 O95453|O95453-3 Poly(A)-specific ribonuclease PARN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13552.13552.2 14.73 14.73 2.239 4 1 1 0 880.9517 1680.9321 S557s TMT10 555 (R) NNsFTAPSTVGK (R) NNS(0.99)FT(0.0)APS(0.0)T(0.0)VGK K:TMT10,s:Phosphorylated S PARN 73963.1 6 5 320.1 365.2 HUMAN 1 14.8527 -8.4501 NIAAAKPTPPKSQVT-p P18583-5;T2163-p NIAAAKPTPPKSQVT 0.0900150447334028 0.16906891913211 -0.510666666666667 -0.165666666666667 22.2681563767624 10.1538112269743 -0.510666666666667 -0.165666666666667 0.00593177080705725 0.0965203476072365 -4.38352066843957 -2.00761987222072 P18583 SON P18583.5.T2163.p_SON P18583-5_T2163t _1_1_2163_2163 P18583-5 P18583-9|P18583-5|P18583-7 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28984.28984.5 24.1 24.1 24.105 2 1 1 0 678.7985 3310.0109 T2163t TMT10 2145 (K) LSEPKPIFFNLNIAAAKPtPPK (S) LS(0.0)EPKPIFFNLNIAAAKPT(0.99)PPK K:TMT10,t:Phosphorylated T SON 267429.6 2 39 45.1 778.56 HUMAN 1 -22.2682 -10.1538 NIAGKVVTPDQKQAA-p Q8NEM0;T312-p NIAGKVVTPDQKQAA 0.118673427068097 0.0180533457525992 -0.301 -0.707666666666667 19.2541678461484 24.0072232566292 -0.301 -0.707666666666667 0.0118736219031758 0.0039744558255129 -3.72068343755367 -4.79097946997298 Q8NEM0 MCPH1 Q8NEM0.T312.p_MCPH1 Q8NEM0_T312t _1_1_312_312 Q8NEM0 Q8NEM0|Q8NEM0-3|Q8NEM0-2 Microcephalin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9970.9970.2 8.18 4.82 99 1 1 1 0 662.8673 1244.7615 T312t TMT10 310 (K) VVtPDQK (Q) VVT(1.0)PDQK K:TMT10,t:Phosphorylated T MCPH1 94330.9 1 1 3936.1 40.48 HUMAN 1 -19.2542 -24.0072 NICGREKSGIQPLCP-p P42166;S335-p NICGREKSGIQPLCP 0.111103148134641 0.138507016379724 0.469 -0.265333333333333 19.9478579727961 11.3093572904279 0.469 -0.265333333333333 0.0101207850853072 0.0739714736860043 3.8677690539913 -2.20936890208221 P42166 TMPO P42166.S335.p_TMPO P42166_S335s _1_1_335_335 P42166 P42166 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11678.11678.3 11.13 11.13 99 1 1 1 0 651.3403 1872.0413 S335s TMT10 333 (R) EKsGIQPLCPER (S) EKS(1.0)GIQPLCPER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TMPO 76061.2 1 17 123.1 546.19 HUMAN 1 19.9479 -11.3094 NIDPKPCTPRGMQPE-p Q96EP5;T86-p NIDPKPCTPRGMQPE 0.486350322519858 0.0520851134879337 -0.092 -0.480666666666667 5.76536260472089 17.1253885188327 -0.092 -0.480666666666667 0.265132971676625 0.0193847921229594 -1.24264983516917 -3.28484594687416 Q96EP5 DAZAP1 Q96EP5.T86.p_DAZAP1 Q96EP5_T86t _1_1_86_86 Q96EP5 Q96EP5 DAZ-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9591.9591.3 7.67 7.67 99 1 1 1 0 579.3028 1655.9303 T86t TMT10 79 (R) NIDPKPCtPR (G) NIDPKPCT(1.0)PR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T DAZAP1 43610.8 1 1 7113.1 7.67 HUMAN 1 -5.7654 -17.1254 NIEQIFRSFVVSKFR-p P18583-5;S11-p NIEQIFRSFVVSKFR 0.739118396287836 0.962290182291263 0.06 0.00600000000000004 2.48888378735185 0.237821702535507 0.06 0.00600000000000005 0.56378253916283 0.946711886027944 0.614539470621617 0.0699882259200519 P18583 SON P18583.5.S11.p_SON P18583-5_S11s _1_1_11_11 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-2|P18583-6|P18583-8|J3QSZ5 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36852.36852.3 13.92 12.27 3.914 3 1 1 0 697.368 2010.1221 S11s Acetyl 2 (M) ATNIEQIFRsFVVSK (F) AT(0.0)NIEQIFRS(0.99)FVVS(0.0)K K:TMT10,s:Phosphorylated S SON 267429.6 1 2 45.1 778.56 HUMAN 1 2.4889 0.2378 NIFERRTSLGEVSKG-p Q9ULJ8-3;S862-p NIFERRTSLGEVSKG 0.219634467679689 0.0164691313166555 -0.347666666666667 0.412333333333333 12.6744111434349 24.6284252074909 -0.347666666666667 0.412333333333333 0.0540205355830041 0.00344474817917977 -2.45255972756969 4.9442279223748 Q9ULJ8 PPP1R9A Q9ULJ8.3.S862.p_PPP1R9A Q9ULJ8-3_S862s _1_1_862_862 Q9ULJ8-3 Q9ULJ8-3|Q9ULJ8-5|Q9ULJ8-4 Isoform 3 of Neurabin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18557.18557.3 13.82 6.3 1.101 4 1 1 0 883.4553 2568.3794 S862s TMT10 861 (R) TsLGEVSKGDTMENLDGK (Q) T(0.0)S(0.99)LGEVS(0.0)KGDT(0.0)MENLDGK K:TMT10,s:Phosphorylated S PPP1R9A 154561.1 3 4 1935.1 106.21 HUMAN 1 -12.6744 24.6284 NIGRSQPSPQAGLAG-p J3KQV8;S1217-p NIGRSQPSPQAGLAG 0.386191491797539 0.773885044250832 0.203666666666667 0.0386666666666667 7.64806424829398 1.53956328416969 0.203666666666667 0.0386666666666667 0.171867426962994 0.70152583858306 1.57404277059939 0.404192242669261 J3KQV8 SYNJ1 J3KQV8.S1217.p_SYNJ1 J3KQV8_S1217s _1_1_1217_1217 J3KQV8 J3KQV8|O43426|A0A0D9SGJ6|C9JFZ1|O43426-2|O43426-4|J3KPK1 Synaptojanin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12647.12647.3 18.45 18.45 1.635 5 1 1 0 760.3738 2199.1356 S1217s TMT10 1214 (R) SQPsPQAGLAGPGPAGYSTAR (P) S(0.0)QPS(0.99)PQAGLAGPGPAGY(0.0)S(0.0)T(0.0)AR s:Phosphorylated S SYNJ1 178858.1 1 5 677.1 246.73 HUMAN 1 7.6481 1.5396 NIGTGRGSEGDCSPE-p Q9UKJ3;S1076-p NIGTGRGSEGDCSPE 0.198300279868763 0.0966816294336957 0.281333333333333 0.286333333333333 13.6870622445366 13.4177556178769 0.281333333333333 0.286333333333333 0.0427852205998982 0.0455223253324247 2.63564013365434 2.58515059605319 Q9UKJ3 GPATCH8 Q9UKJ3.S1076.p_GPATCH8 Q9UKJ3_S1076s _1_1_1076_1076 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8346.8346.3 17.54 11.52 1.103 6 1 1 0 1052.816 3076.4642 S1076s TMT10 1060 (K) ATGPPSQNSNIGTGRGsEGDCSPEDK (N) AT(0.0)GPPS(0.0)QNS(0.0)NIGT(0.0)GRGS(0.99)EGDCS(0.0)PEDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GPATCH8 165107.3 4 13 231.1 422.52 HUMAN 1 13.6871 13.4178 NIHLRTHTGEKPYKC-p O75362;T494-p NIHLRTHTGEKPYKC 0.275945181439664 0.00176923659520671 -0.225666666666667 -0.955 10.5767029957795 43.5109150986177 -0.225666666666667 -0.955 0.0875648282980559 4.45562354399024e-05 -2.08210628445288 -11.8291064253854 O75362 ZNF217 O75362.T494.p_ZNF217 O75362_T494t _1_1_494_494 O75362 O75362|P17040|P17040-3|P17040-2|Q9UEG4|P51814-6|Q9P0L1|Q9HBT7|Q99676|Q86WZ6-2|Q9P2J8|P51814-5|P51814-3|P51814-2|P51814-7|P51814-8|Q8N8J6-2|A0A087X254|Q9P2J8-2|Q8N8J6-3|H9KV89|Q6ZMW2|P51814-4|O14978|Q8N7K0|Q9Y2A4|Q86YE8|P15621|Q2M218|O95125|Q8N184|A0A087WT67|A6NHJ4|O14628|Q9H7R0|P17025-2|Q8N7K0-2|P15621-3|Q2M218-2|A0A087WXA8|P17017|Q32M78|Q8N972|Q96RE9-3|Q96RE9-2|Q96MX3|Q8N184-1|P15621-2|Q86XU0|Q9NPC7-2|Q8NDW4|Q86YE8-4|Q86YE8-2|F8W7T7|Q7Z7L9|A0A0C4DFQ3|O14628-6|P16415|Q86YE8-3|O14628-5|A0A0A0MS50|F8WEL6|P36508|Q96RE9-4|Q9UC07|O14628-7|Q9H7R0-2|O14628-4|Q14584|Q6ZMS4|B2ZWH0|C9JN71|Q7Z3I7|A0A087WUV0|P0CG31|Q9HBT8|P36508-2|Q9HBT8-2|B9EG95|Q9NPC7-3|O75346|O95780|Q15937|A0A087WVT1|A6NP11|Q13360|Q96H40|Q13887|Q9UC06|A0A0M3HEQ9|Q8N8L2|Q8IZC7|F5H032|O95780-3|Q96BR6|F8W6Y9|Q8N859|P16415-2|O95125-2|O75346-2|O95780-2|Q9Y4X4|Q9UJN7|Q15973|Q9H4T2|P57682|Q96N95|B4DI05|Q6U7Q0|Q96BR6-2|Q13887-4|A0A087X2B0|Q15973-4|O75840-4|O75840-2|P52743|Q6ZT77|Q15973-2 Zinc finger protein 217 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5797.5797.4 12.26 12.26 3.091 3 1 1 0 457.755 1748.031 T494t TMT10 492 (R) THtGEKPYK (C) T(0.0)HT(0.99)GEKPY(0.0)K K:TMT10,t:Phosphorylated T ZNF217 117152.8 4 7 394.1 330.8 HUMAN 1 -10.5767 -43.5109 NIIHGSDSVESAEKE-p P15531-2;S147-p NIIHGSDSVESAEKE 0.664059615597144 0.194509645400719 0.193 -0.138666666666667 3.32726659518135 9.35063728799817 0.193 -0.138666666666667 0.464807728385078 0.116127819423143 0.786134876444614 -1.86837775843692 P15531 NME1 P15531.2.S147.p_NME1 P15531-2_S147s _1_1_147_147 P15531-2 P15531-2 Isoform 2 of Nucleoside diphosphate kinase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10490.10490.3 16.12 16.12 1.43 3 1 1 0 675.3415 1944.0438 S147s TMT10 140 (R) NIIHGSDsVESAEK (E) NIIHGS(0.0)DS(0.99)VES(0.0)AEK K:TMT10,s:Phosphorylated S NME1 19881.5 1 1 2569.2 78.26 HUMAN 1 3.3273 -9.3506 NIIPLYNSMKKKVLS-p Q8WWQ0;S1274-p NIIPLYNSMKKKVLS 0.285630941313579 0.0278810327469769 -0.263666666666667 0.324333333333333 10.2708278993385 21.0670251376318 -0.263666666666667 0.324333333333333 0.0939544187368443 0.0078216339318062 -2.02880430066025 4.10767191380893 Q8WWQ0 PHIP Q8WWQ0.S1274.p_PHIP Q8WWQ0_S1274s _1_1_1274_1274 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23595.23595.4 16.33 16.33 3.366 4 1 1 0 689.6096 2675.4504 S1274s TMT10 1262 (K) DQTCYNIIPLYNsMKK (K) DQT(0.0)CY(0.0)NIIPLY(0.0)NS(0.99)MKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PHIP 208454.1 2 10 108.1 577.05 HUMAN 1 -10.2708 21.067 NIKAPKISIPDVDLD-p Q09666;S4850-p NIKAPKISIPDVDLD 0.687777093309933 0.0257079144253812 0.068 0.409 3.05232389862594 21.6252542606103 0.068 0.409 0.495185147597621 0.00687819642268823 0.731019980690658 4.23237894369754 Q09666 AHNAK Q09666.S4850.p_AHNAK Q09666_S4850s _1_1_4850_4850 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25668.25668.5 17.74 17.74 99 1 1 1 0 561.3363 2722.6889 S4850s TMT10 4846 (K) APKIsIPDVDLDLKGPK (V) APKIS(1.0)IPDVDLDLKGPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 9 104 1.1 4313.36 HUMAN 1 3.0523 21.6253 NIKAPKISMPDFDLH-p Q09666;S2580-p NIKAPKISMPDFDLH 0.547515630186733 0.61484966285709 -0.116 -0.0613333333333333 4.8298596873628 2.87024075779363 -0.116 -0.0613333333333333 0.328862255644864 0.516387741733694 -1.07278476325098 -0.693836219597262 Q09666 AHNAK Q09666.S2580.p_AHNAK Q09666_S2580s _1_1_2580_2580 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28694.28694.3 18.46 11.54 99 1 1 1 0 618.6602 1773.9973 S2580s TMT10 2579 (K) IsMPDFDLHLK (G) IS(1.0)MPDFDLHLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 4 72 1.1 4313.36 HUMAN 1 -4.8299 -2.8702 NIKAPKISMPDIDFN-p Q09666;S4386-p NIKAPKISMPDIDFN 0.822608097968935 0.978227885744309 -0.0356666666666667 0.00300000000000002 1.63114484149285 0.136822077288791 -0.0356666666666667 0.00300000000000002 0.68688734611945 0.968986646822009 -0.425473153953111 0.0407066834846115 Q09666 AHNAK Q09666.S4386.p_AHNAK Q09666_S4386s _1_1_4386_4386 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32342.32686.3 15.74 12.11 99 1 1 1 0 610.9872 1750.9814 S4386s TMT10 4385 (K) IsMPDIDFNLK (G) IS(1.0)MPDIDFNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 95 1.1 4313.36 HUMAN 1 -1.6311 0.1368 NIKAPKISMPDIDLN-p Q09666;S2708-p NIKAPKISMPDIDLN 0.513394375142527 0.828962288733982 -0.0996666666666667 -0.03 5.34888109839365 1.13793709812032 -0.0996666666666667 -0.03 0.291817874685707 0.769495864574621 -1.16762547393486 -0.30809843395413 Q09666 AHNAK Q09666.S2708.p_AHNAK Q09666_S2708s _1_1_2708_2708 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27509.27879.3 15.65 15.65 99 1 1 1 0 774.7744 2242.3448 S2708s TMT10 2704 (K) APKIsMPDIDLNLK (G) APKIS(1.0)MPDIDLNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 20 73 1.1 4313.36 HUMAN 1 -5.3489 -1.1379 NIKAPKISMPDVDLH-p Q09666;S947-p NIKAPKISMPDVDLH 0.386338293466165 0.626026907213467 -0.166 0.0776666666666667 7.64519564651023 2.76781433731313 -0.166 0.0776666666666667 0.171980986330768 0.528711267993087 -1.57354398576425 0.6727545762411 Q09666 AHNAK Q09666.S947.p_AHNAK Q09666_S947s _1_1_947_947 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23517.23517.3 14.93 9.56 99 1 1 1 0 608.6448 1743.9538 S947s TMT10 946 (K) IsMPDVDLHMK (G) IS(1.0)MPDVDLHMK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 41 1.1 4313.36 HUMAN 1 -7.6452 2.7678 NIKAPKVSMPDVDLN-p Q09666;S1782-p NIKAPKVSMPDVDLN 0.475290008488182 0.880606670623547 -0.107 0.016 5.94725366884922 0.7754294027887 -0.107 0.016 0.254258003875003 0.836482885554224 -1.27516155323203 0.216537383687352 Q09666 AHNAK Q09666.S1782.p_AHNAK Q09666_S1782s _1_1_1782_1782 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26817.26817.3 15.14 13.88 99 1 1 1 0 590.3159 1688.9657 S1782s TMT10 1781 (K) VsMPDVDLNLK (G) VS(1.0)MPDVDLNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 61 1.1 4313.36 HUMAN 1 -5.9473 0.7754 NIKLNQSSPDNVTDT-p Q08AD1;S599-p NIKLNQSSPDNVTDT 0.212865554763296 0.0204574506539449 -0.209333333333333 -0.360333333333333 12.9637205319209 23.1233633167232 -0.209333333333333 -0.360333333333333 0.0505391515601949 0.00487151078454671 -2.50453160772694 -4.57848764476806 Q08AD1 CAMSAP2 Q08AD1.S599.p_CAMSAP2 Q08AD1_S599s _1_1_599_599 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11891.11891.2 13.43 13.43 1.147 4 1 1 0 978.9867 1877.0016 S599s TMT10 595 (K) LNQSsPDNVTDTK (G) LNQS(0.0)S(0.99)PDNVT(0.0)DT(0.0)K K:TMT10,s:Phosphorylated S CAMSAP2 169284 5 6 28.2 931.95 HUMAN 1 -12.9637 -23.1234 NIKNARKSPLAQDSP-p Q69YH5;S120-p NIKNARKSPLAQDSP 0.980718323017045 0.518833384499578 0.00866666666666667 0.318666666666667 0.167755030689316 3.82881825134093 0.00866666666666663 0.318666666666667 0.962109486661528 0.414112342640867 0.04974589070437 0.884118219209102 Q69YH5 CDCA2 Q69YH5.S120.p_CDCA2 Q69YH5_S120s _1_1_120_120 Q69YH5 Q69YH5|E9PEI0 Cell division cycle-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10071.10071.4 12.59 12.59 1.353 5 1 1 0 696.1215 2701.4786 S120s TMT10 116 (K) NARKsPLAQDSPSQGSPALYR (N) NARKS(0.99)PLAQDS(0.0)PS(0.0)QGS(0.0)PALY(0.0)R K:TMT10,s:Phosphorylated S CDCA2 114214.8 1 3 407.1 324.13 HUMAN 1 0.1678 3.8288 NIKPNETSPSFSKAE-p Q99700;S772-p NIKPNETSPSFSKAE 0.262997981631407 0.0284058958503704 -0.222 -0.287 11.0051269127193 20.9498620892946 -0.222 -0.287 0.0793391071382462 0.00803551638653912 -2.15700756111384 -4.08177852146989 Q99700 ATXN2 Q99700.S772.p_ATXN2 Q99700_S772s _1_1_772_772 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13353.13353.3 14.4 14.4 1.432 4 1 1 0 782.4157 2265.2694 S772s TMT10 764 (K) ENIKPNETsPSFSK (A) ENIKPNET(0.0)S(0.99)PS(0.0)FS(0.0)K K:TMT10,s:Phosphorylated S ATXN2 140907.9 18 18 176.1 481.52 HUMAN 1 -11.0051 -20.9499 NIKSLSHSPGVVKER-p F5H527;S1254-p NIKSLSHSPGVVKER 0.171878912242983 0.00879048678042347 -0.226 -0.438666666666667 15.2293889266069 29.150617571504 -0.226 -0.438666666666667 0.0299958454538562 0.00121601306996245 -2.92158500710581 -6.16838769004041 F5H527 SSH2 F5H527.S1254.p_SSH2 F5H527_S1254s _1_1_1254_1254 F5H527 F5H527|Q76I76 Protein phosphatase Slingshot homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9495.9495.3 14.19 14.19 2.738 3 1 1 0 516.9562 1468.8888 S1254s TMT10 1250 (K) SLSHsPGVVK (E) S(0.0)LS(0.0)HS(0.99)PGVVK K:TMT10,s:Phosphorylated S SSH2 162969.8 3 9 998.1 190.13 HUMAN 1 -15.2294 -29.1506 NIKVPKISMPDVDLH-p Q09666;S819-p NIKVPKISMPDVDLH 0.271732742608548 0.0988195822237497 -0.231666666666667 0.179 10.7228210743502 13.2872124236344 -0.231666666666667 0.179 0.0846677253933424 0.0469114392786347 -2.10761775863527 2.56150948377347 Q09666 AHNAK Q09666.S819.p_AHNAK Q09666_S819s _1_1_819_819 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25644.25644.3 17.72 10.01 99 1 1 1 0 602.6607 1725.9973 S819s TMT10 818 (K) IsMPDVDLHLK (G) IS(1.0)MPDVDLHLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 38 1.1 4313.36 HUMAN 1 -10.7228 13.2872 NILRASHSAVDITKV-p Q9NQX3-2;S338-p NILRASHSAVDITKV 0.980105970574778 0.233749664579325 -0.00933333333333334 -0.160333333333333 0.173231612254659 8.31237224041684 -0.00933333333333333 -0.160333333333333 0.960897002859202 0.147490068035765 -0.0513393744635986 -1.68875260540035 Q9NQX3 GPHN Q9NQX3.2.S338.p_GPHN Q9NQX3-2_S338s _1_1_338_338 Q9NQX3-2 F5H039|Q9NQX3-2|G3V582 Isoform 2 of Gephyrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8498.8498.3 15.37 15.37 2.241 3 1 1 0 522.9487 1486.863 S338s TMT10 335 (R) ASHsAVDITK (V) AS(0.0)HS(0.99)AVDIT(0.0)K K:TMT10,s:Phosphorylated S GPHN 84130.7 3 5 1469.1 139.8 HUMAN 1 -0.1732 -8.3124 NILRRVNSAPLINGL-p Q6P4D5;S29-p NILRRVNSAPLINGL 0.61751703963204 0.44748606302779 0.0763333333333333 0.0763333333333334 3.8855268832522 4.65468927892302 0.0763333333333333 0.0763333333333334 0.408740161011437 0.34239788400803 0.895183768440891 1.04018214949382 Q6P4D5 FAM122C Q6P4D5.S29.p_FAM122C Q6P4D5_S29s _1_1_29_29 Q6P4D5 Q6P4D5|Q6P4D5-2|Q6P4D5-3 Protein FAM122C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30552.30552.3 15.64 15.64 8.373 2 1 1 0 974.84 2842.5559 S29s TMT10 26 (R) RVNsAPLINGLGFNSQVLQADMLR (I) RVNS(0.99)APLINGLGFNS(0.0)QVLQADMLR s:Phosphorylated S FAM122C 22806.5 1 1 5882.1 15.64 HUMAN 1 3.8855 4.6547 NILYADDTPGAPVKI-p O75676;T542-p NILYADDTPGAPVKI 0.907148569061123 0.342847612781353 0.018 0.0916666666666667 0.830244817776836 6.15824784606617 0.018 0.0916666666666667 0.825991385993487 0.242200600397997 0.230737771050784 1.31238556562775 O75676 RPS6KA4 O75676.T542.p_RPS6KA4 O75676_T542t _1_1_542_542 O75676 O75676|O75676-2 Ribosomal protein S6 kinase alpha-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23613.23613.3 15.82 15.82 7.08 2 1 1 0 941.8438 2743.5485 T542t TMT10 530 (R) DLKPENILYADDtPGAPVK (I) DLKPENILY(0.0)ADDT(0.99)PGAPVK K:TMT10,t:Phosphorylated T RPS6KA4 86174.8 1 3 1564.1 131.32 HUMAN 1 0.8302 6.1582 NINKVSNSLINFGRK-p Q92609-2;S460-p NINKVSNSLINFGRK 0.961539577628342 0.0157813938405238 -0.00733333333333334 -0.381333333333333 0.327280550408124 24.9060406486344 -0.00733333333333335 -0.381333333333333 0.927410364091517 0.00323143879906011 -0.0954265387695651 -5.01379184799893 Q92609 TBC1D5 Q92609.2.S460.p_TBC1D5 Q92609-2_S460s _1_1_460_460 Q92609-2 Q92609-2|C9J3F6 Isoform 2 of TBC1 domain family member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19333.19333.3 13.34 13.34 2.108 2 1 1 0 591.6646 1693.0161 S460s TMT10 457 (K) VSNsLINFGRK (L) VS(0.0)NS(0.99)LINFGRK K:TMT10,s:Phosphorylated S TBC1D5 91784.7 2 3 328.1 359.68 HUMAN 1 -0.3273 -24.906 NINNLNVSEADRKCE-p Q15003;S233-p NINNLNVSEADRKCE 0.651183474642633 0.875244672236448 0.092 -0.0396666666666667 3.49162889020289 0.814662253607211 0.092 -0.0396666666666667 0.44754541370132 0.82896038117046 0.818614885942173 -0.226697872190195 Q15003 NCAPH Q15003.S233.p_NCAPH Q15003_S233s_1_1_233_233 Q15003 Q15003 Condensin complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22925.22925.4 13.07 8.15 0.415 2 1 1 0 969.498 3793.982 N231n S233s TMT10 222 (R) TIEQNINNLnVsEADRKCEIDPMFQK (T) T(0.0)IEQN(0.0)IN(0.33)N(0.33)LN(0.33)VS(0.99)EADRKCEIDPMFQK K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S NCAPH 83360.5 2 9 558.1 272.98 HUMAN 1 3.4916 -0.8147 NINTFVETPVQKLDL-p P46013;T2406-p NINTFVETPVQKLDL 0.212087105290786 0.00375553060202295 0.228666666666667 -0.810333333333333 13.0023034065474 35.9743618232335 0.228666666666667 -0.810333333333333 0.0500921484944565 0.000252675897904541 2.51148199245928 -8.45992066308388 P46013 MKI67 P46013.T2406.p_MKI67 P46013_T2406t _1_1_2406_2406 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33142.33142.4 21.3 16.74 4.423 3 1 1 0 816.962 3184.8549 T2406t TMT10 2399 (K) NINTFVEtPVQKLDLLGNLPGSK (R) NINT(0.0)FVET(0.99)PVQKLDLLGNLPGS(0.0)K K:TMT10,t:Phosphorylated T MKI67 360912.4 5 83 5.1 1918.46 HUMAN 1 13.0023 -35.9744 NIPAVIITDMGTQED-p P27987;T572-p NIPAVIITDMGTQED 0.602237420040442 0.0581817791565842 0.079 0.222666666666667 4.06868742242983 16.4578785685419 0.079 0.222666666666667 0.391860291992859 0.0226053972369166 0.930236692830357 3.15430062026926 P27987 ITPKB P27987.T572.p_ITPKB P27987_T572t_1_1_572_572 P27987 P27987|P27987-2 Inositol-trisphosphate 3-kinase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.32206.32206.3 12.84 12.84 1.166 6 1 1 0 1185.5496 3473.6726 N565n T572t TMT10 560 (K) ACSPSnIPAVIItDMGTQEDGALEETQGSPR (G) ACS(0.0)PS(0.0)N(1.0)IPAVIIT(0.99)DMGT(0.0)QEDGALEET(0.0)QGS(0.0)PR C:Carbamidomethylation,n:Deamidated,t:Phosphorylated T ITPKB 103230.2 5 12 424.1 319.61 HUMAN 1 4.0687 16.4579 NIPCAAVSPNRSKCE-p Q13118;S206-p NIPCAAVSPNRSKCE 0.204121902978147 0.0114866088005294 -0.243 -0.384333333333333 13.3634048524521 27.1448511745465 -0.243 -0.384333333333333 0.0460956045049269 0.00192981146646707 -2.57676139858015 -5.60054433144676 Q13118 KLF10 Q13118.S206.p_KLF10 Q13118_S206s _1_1_206_206 Q13118 Q13118|Q13118-2 Krueppel-like factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10652.10652.3 9.52 5.16 2.797 2 1 1 0 651.3448 1872.0526 S206s TMT10 199 (K) NIPCAAVsPNRSK (C) NIPCAAVS(0.99)PNRS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KLF10 53410.1 2 1 2790.1 70.55 HUMAN 1 -13.3634 -27.1449 NIPNLKDSLEEGQVD-p O94876;S392-p NIPNLKDSLEEGQVD 0.286866398353762 0.0848011345080055 -0.19 -0.196666666666667 10.229942372338 14.1842799790504 -0.19 -0.196666666666667 0.0948431048195135 0.038156804956534 -2.02168914523795 -2.72515484605606 O94876 TMCC1 O94876.S392.p_TMCC1 O94876_S382sS392s_2_2_382_392 O94876 O94876|E9PC87|O94876-2|Q6N039 Transmembrane and coiled-coil domains protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21689.21689.5 13.69 13.69 99 2 2 2 0 768.3923 3677.9792 S382s S392s TMT10 378 (R) NKFGsADNIPNLKDsLEEGQVDDAGK (A) NKFGS(1.0)ADNIPNLKDS(1.0)LEEGQVDDAGK K:TMT10,s:Phosphorylated S TMCC1 72481.1 4 5 1921.1 106.93 HUMAN 1 -10.2299 -14.1843 NIPSLNDSDSEIEDI-p A0A1B0GTW1;S457-p NIPSLNDSDSEIEDI 0.396320278249166 0.107736058899494 0.119333333333333 0.198333333333333 7.41863171171129 12.7821296271269 0.119333333333333 0.198333333333333 0.18119108633772 0.0526971389852203 1.5341116056619 2.47055255011455 A0A1B0GTW1 NotFound A0A1B0GTW1.S457.p_NotFound A0A1B0GTW1_S457s _1_1_457_457 A0A1B0GTW1 Q9UDY2-4|Q9UDY2-5|A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31326.31326.3 28.31 29.63 1.139 7 1 1 0 1190.8875 3490.687 S457s TMT10 443 (R) DSQQTLINIPSLNDsDSEIEDISEIESNR (S) DS(0.0)QQT(0.0)LINIPS(0.0)LNDS(0.99)DS(0.0)EIEDIS(0.0)EIES(0.0)NR s:Phosphorylated S TJP2 141123.7 6 10 41.1 827.72 HUMAN 1 7.4186 12.7821 NIPVRSNSFNNPLGN-p O95835;S464-p NIPVRSNSFNNPLGN 0.903965293335962 0.328751203387295 -0.02 -0.109 0.862613595126866 6.39737219093395 -0.02 -0.109 0.819858003226974 0.229225421987168 -0.239052335376394 -1.35471419113232 O95835 LATS1 O95835.S464.p_LATS1 O95835_S464s _1_1_464_464 O95835 O95835|O95835-2 Serine/threonine-protein kinase LATS1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12968.12968.3 7.21 7.21 2.503 2 1 1 0 510.2423 1448.7444 S464s TMT10 462 (R) SNsFNNPLGNR (A) S(0.0)NS(0.99)FNNPLGNR s:Phosphorylated S LATS1 127380.9 1 5 824.1 217.64 HUMAN 1 -0.8626 -6.3974 NIQKPEYSE______-p Q9BQP7;S343-p NIQKPEYSE______ 0.878163316796656 0.012599236597768 0.0233333333333333 0.435 1.109915808496 26.4925221564615 0.0233333333333333 0.435 0.77447681151747 0.00224257917219416 0.301226857688433 5.42468912848443 Q9BQP7 MGME1 Q9BQP7.S343.p_MGME1 Q9BQP7_S343s _1_1_343_343 Q9BQP7 Q9BQP7|Q5QPE8 Mitochondrial genome maintenance exonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8605.8605.4 15.94 15.94 4.407 2 1 1 0 651.3664 2522.4748 S343s TMT10 332 (K) KKNQNIQKPEYsE (-) KKNQNIQKPEY(0.0)S(0.99)E K:TMT10,s:Phosphorylated S MGME1 39819.6 4 1 4574.1 29.53 HUMAN 1 1.1099 26.4925 NIQTHKISMPDVGLN-p Q09666;S1580-p NIQTHKISMPDVGLN 0.278015984722801 0.935393330941843 -0.166666666666667 0.016 10.5233068297261 0.409526513731444 -0.166666666666667 0.016 0.0886480765772911 0.910012480645365 -2.07279180880901 0.118401404891452 Q09666 AHNAK Q09666.S1580.p_AHNAK Q09666_S1580s _1_1_1580_1580 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27053.27053.5 19.45 17.88 6.434 3 1 1 0 726.0045 3546.018 S1580s TMT10 1567 (K) FKMPSMNIQTHKIsMPDVGLNLK (A) FKMPS(0.0)MNIQT(0.0)HKIS(0.99)MPDVGLNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 5 59 1.1 4313.36 HUMAN 1 -10.5233 0.4095 NIRGGKASQLGIFIS-p Q5EBL8-2;S99-p NIRGGKASQLGIFIS 0.993618410078581 0.515406413328896 -0.00133333333333333 0.0853333333333333 0.0579476514401654 3.86394422858464 -0.00133333333333333 0.0853333333333333 0.986745682584646 0.410776487646664 -0.0173939365527929 0.890884282085346 Q5EBL8 PDZD11 Q5EBL8.2.S99.p_PDZD11 Q5EBL8-2_S99s _1_1_99_99 Q5EBL8-2 Q5EBL8-2 Isoform 2 of PDZ domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22909.22909.3 7.05 7.05 7.047 2 1 1 0 691.7437 1993.2413 S99s TMT10 95 (R) GGKAsQLGIFISK (V) GGKAS(0.99)QLGIFIS(0.0)K K:TMT10,s:Phosphorylated S PDZD11 19606 1 1 7278.1 7.05 HUMAN 1 -0.0579 3.8639 NIRGRMESIRWLLAA-p P09210;S18-p NIRGRMESIRWLLAA 0.807313814085276 0.072354838148445 0.0683333333333333 0.497333333333333 1.7893304316563 15.1553007838425 0.0683333333333333 0.497333333333333 0.662318608013022 0.0305119470206081 0.461625257647631 2.90570880690979 P09210 GSTA2 P09210.S18.p_GSTA2 P09210_S18s _1_1_18_18 P09210 P09210 Glutathione S-transferase A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36987.36987.2 7.92 4.42 99 1 1 1 0 1309.1888 2537.3838 S18s TMT10 16 (R) MEsIRWLLAAAGVEFEEK (F) MES(1.0)IRWLLAAAGVEFEEK K:TMT10,s:Phosphorylated S GSTA2 25663.5 1 1 7067.1 7.92 HUMAN 1 1.7893 15.1553 NISCKIKSGCEGHLP-p Q8TAT6-2;S192-p NISCKIKSGCEGHLP 0.738786253352318 0.43139144399496 0.0536666666666667 -0.0756666666666666 2.49455022397469 4.86485341763244 0.0536666666666667 -0.0756666666666667 0.563047426244759 0.326223060836174 0.615737500916069 -1.07901949775575 Q8TAT6 NPLOC4 Q8TAT6.2.S192.p_NPLOC4 Q8TAT6-2_S192s _1_1_192_192 Q8TAT6-2 Q8TAT6-2 Isoform 2 of Nuclear protein localization protein 4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19467.19467.4 8.83 8.83 8.74 2 1 1 0 706.1166 2741.4834 S192s TMT10 190 (K) IKsGCEGHLPWPNGICTK (C) IKS(0.99)GCEGHLPWPNGICT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NPLOC4 70258.3 1 2 5537.1 18.41 HUMAN 1 2.4946 -4.8649 NISFSRDSPEENVQS-p Q8NDV7;S1217-p NISFSRDSPEENVQS 0.375400137942411 0.486916370153701 0.148666666666667 -0.0683333333333333 7.87096086400037 4.17555454047604 0.148666666666667 -0.0683333333333333 0.163269067983275 0.382335431023348 1.6127675294003 -0.950375549649723 Q8NDV7 TNRC6A Q8NDV7.S1217.p_TNRC6A Q8NDV7_S1217s _1_1_1217_1217 Q8NDV7 Q8NDV7|Q8NDV7-5|Q8NDV7-6|Q8NDV7-2 Trinucleotide repeat-containing gene 6A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16407.16407.3 17.36 11.77 2.55 5 1 1 0 951.1269 2771.4001 S1217s TMT10 1207 (K) QFSNISFSRDsPEENVQSNK (M) QFS(0.0)NIS(0.0)FS(0.0)RDS(0.99)PEENVQS(0.0)NK K:TMT10,s:Phosphorylated S TNRC6A 211092.3 6 9 181.1 478.43 HUMAN 1 7.871 -4.1756 NISNLQKSISNPPGS-p Q9H4A3-7;S2821-p NISNLQKSISNPPGS 0.33992332517821 0.722920944129696 0.200333333333333 0.0426666666666667 8.72005468018144 1.93938659236822 0.200333333333333 0.0426666666666667 0.134274805505857 0.639825199500863 1.75990396105326 0.495279659573718 Q9H4A3 WNK1 Q9H4A3.7.S2821.p_WNK1 Q9H4A3-7_S2821s _1_1_2821_2821 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2|F5GWT4 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10189.10453.2 12.14 12.14 2.136 3 1 1 0 725.8655 1370.7589 S2821s TMT10 2821 (K) sISNPPGSNLR (T) S(0.99)IS(0.0)NPPGS(0.0)NLR s:Phosphorylated S WNK1 301202.7 1 24 162.1 495.27 HUMAN 1 8.7201 1.9394 NISSHNQSPKRHSIS-p Q9H1A4;S377-p NISSHNQSPKRHSIS 0.152381872383781 0.00430383606637292 -0.414666666666667 -0.763666666666667 16.4365209003418 34.7787128698876 -0.414666666666667 -0.763666666666667 0.0227168395167713 0.000332758159102319 -3.1524620374148 -8.01310412873812 Q9H1A4 ANAPC1 Q9H1A4.S377.p_ANAPC1 Q9H1A4_S377s _1_1_377_377 Q9H1A4 Q9H1A4 Anaphase-promoting complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11110.11110.3 13 13 4.058 3 1 1 0 599.6412 1716.9433 S377s TMT10 369 (R) FNISSHNQsPK (R) FNIS(0.0)S(0.0)HNQS(0.99)PK K:TMT10,s:Phosphorylated S ANAPC1 218664.2 1 4 460.1 305.66 HUMAN 1 -16.4365 -34.7787 NITSAAPSNDQDGEY-p P78362;S312-p NITSAAPSNDQDGEY 0.297330507583042 0.0463462978252902 -0.154333333333333 -0.305 9.91212527765339 17.849101885946 -0.156515171523657 -0.305 0.102043999565478 0.0164092907962785 -1.96644757768047 -3.42901295955104 P78362 SRPK2 P78362.S312.p_SRPK2 P78362_S312s _1_1_312_312 P78362 P78362-2 SRSF protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24993.24993.4 8.76 0.4 1.166 4 1 1 0 837.16 3265.6299 S312s Hydrogen 300 (R) KIIEENITSAAPsNDQDGEYCPEVK (L) KIIEENIT(0.0)S(0.0)AAPS(0.99)NDQDGEY(0.0)CPEVK K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S SRPK2 78267 1 4 2258.1 91.02 HUMAN 1 -9.9121 -17.8491 NIVDQEGSLLGKGET-p M0R2Z9;S238-p NIVDQEGSLLGKGET 0.47451765078145 0.773556024416885 -0.113333333333333 0.0346666666666667 5.96401807627856 1.54245873552755 -0.113333333333333 0.0346666666666667 0.253278422367061 0.701058285560219 -1.27815103464988 0.404867193036845 M0R2Z9 SUGP2 M0R2Z9.S238.p_SUGP2 M0R2Z9_S238s _1_1_238_238 M0R2Z9 M0R2Z9|Q8IX01|Q8IX01-3|Q8IX01-4|M0R3F6 SURP and G-patch domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26941.26941.3 15.75 15.75 99 1 1 1 0 665.7036 1915.1264 S238s TMT10 229 (R) ALNIVDQEGsLLGK (G) ALNIVDQEGS(1.0)LLGK K:TMT10,s:Phosphorylated S SUGP2 122455.2 1 3 963.1 194.03 HUMAN 1 -5.964 1.5425 NIVTENCS_______-p A0A087X0W9;S323-p NIVTENCS_______ 0.62471869465399 0.90345905210967 -0.092 0.0136666666666667 3.79772231966883 0.614716805161439 -0.092 0.0136666666666667 0.417088070159296 0.86801717712961 -0.878261053228932 0.174214316382406 A0A087X0W9 OTUD6B A0A087X0W9.S323.p_OTUD6B A0A087X0W9_S323s _1_1_323_323 A0A087X0W9 A0A087X0W9|Q8N6M0|Q8N6M0-2 OTU domain containing 6B, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24944.24944.2 9.23 9.23 4.353 2 1 1 0 729.3467 1377.7245 S323s TMT10 314 (R) LVNIVTENCs (-) LVNIVT(0.0)ENCS(0.99) C:Carbamidomethylation,s:Phosphorylated S OTUD6B 37610.5 1 2 4764.1 26.93 HUMAN 1 -3.7977 0.6147 NKAEVHESYKHLKSL-p Q15067-2;S649-p NKAEVHESYKHLKSL 0.148299935849049 0.548273103524954 -0.346 -0.071 16.7376789836035 3.5103651278057 -0.346 -0.071 0.0211949356156441 0.445618781965223 -3.21114545832884 -0.8221693986387 Q15067 ACOX1 Q15067.2.S649.p_ACOX1 Q15067-2_S649s _1_1_649_649 Q15067-2 Q15067|Q15067-2|Q15067-3 Isoform 2 of Peroxisomal acyl-coenzyme A oxidase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7334.7334.3 14.49 14.49 4.65 2 1 1 0 500.9215 1420.7837 S649s TMT10 644 (K) AEVHEsYK (H) AEVHES(0.99)Y(0.0)K K:TMT10,s:Phosphorylated S ACOX1 75179.9 2 5 1619.1 127.14 HUMAN 1 -16.7377 -3.5104 NKAPEGRSPLSAEEL-p A0A087X1R1;S661-p NKAPEGRSPLSAEEL 0.908945932977241 0.0138786943722197 0.0176666666666667 -0.399666666666667 0.814311279082188 25.787560736964 0.0176666666666667 -0.399666666666667 0.829027376203734 0.00263781252644418 0.226629063602922 -5.23923787125375 A0A087X1R1 SMTN A0A087X1R1.S661.p_SMTN A0A087X1R1_S661s _1_1_661_661 A0A087X1R1 A0A087X1R1|A0A087WVP4|P53814-6|P53814-5|P53814-2 Smoothelin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27640.27640.4 15.44 13.61 1.806 3 1 1 0 781.8981 3044.5862 S661s TMT10 656 (K) APEGRsPLSAEELMTIEDEGVLDK (M) APEGRS(0.99)PLS(0.0)AEELMT(0.0)IEDEGVLDK K:TMT10,s:Phosphorylated S SMTN 108527.2 3 10 826.1 217.61 HUMAN 1 0.8143 -25.7876 NKAQSNGSGNGSDSE-p Q9NRY4;S1130-p NKAQSNGSGNGSDSE 0.599561298261351 0.160873522207283 0.0833333333333333 0.161333333333333 4.1029149336864 10.4353149037414 0.0833333333333333 0.161333333333333 0.388784110062087 0.0904624841676642 0.936751456587078 2.05657875924596 Q9NRY4 ARHGAP35 Q9NRY4.S1130.p_ARHGAP35 Q9NRY4_S1130sS1134s_2_2_1130_1134 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10955.10955.3 15.08 15.08 1.314 7 2 2 0 840.321 2358.0313 N1128n S1130s S1134s TMT10 1125 (K) AQSnGsGNGsDSEMDTSSLER (G) AQS(0.0)N(0.99)GS(0.99)GN(0.0)GS(0.99)DS(0.0)EMDT(0.0)S(0.0)S(0.0)LER n:Deamidated,s:Phosphorylated S ARHGAP35 172051.4 14 22 247.1 410.47 HUMAN 1 4.1029 10.4353 NKDGVTKSPEKRSSL-p P11137-4;S235-p NKDGVTKSPEKRSSL 0.467422250111991 0.00569033995599683 -0.156666666666667 -0.622333333333333 6.0998676686654 32.5195001213246 -0.156666666666667 -0.622333333333333 0.2454783712826 0.000559822034041221 -1.30233469890567 -7.22411815956353 P11137 MAP2 P11137.4.S235.p_MAP2 P11137-4_S235s _1_1_235_235 P11137-4 P11137-4 Isoform 4 of Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7555.7555.3 7.46 7.46 1.356 2 1 1 0 576.6575 1647.9884 S235s TMT10 230 (K) DGVTKsPEK (R) DGVT(0.0)KS(0.99)PEK K:TMT10,s:Phosphorylated S MAP2 59123.9 5 36 117.2 560.28 HUMAN 1 -6.0999 -32.5195 NKDLESCSDDDNQGS-p Q5T3I0;S130-p NKDLESCSDDDNQGS 0.201297381037897 0.116149082937583 -0.328333333333333 -0.280666666666667 13.5243016363076 12.3343732235296 -0.328333333333333 -0.280666666666667 0.0444191083407111 0.0584201513331239 -2.60598641681711 -2.3905552751924 Q5T3I0 NotFound Q5T3I0.S130.p_NotFound Q5T3I0_S130s _1_1_130_130 Q5T3I0 Q5T3I0|E9PAV9|A0A0A0MRK1|Q5T3I0-3 G patch domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14505.14505.5 19.47 19.47 3.322 6 1 1 0 776.9824 3800.9089 S130s TMT10 112 (K) MATLTSGGEKPNKDLESCsDDDNQGSK (S) MAT(0.0)LT(0.0)S(0.0)GGEKPNKDLES(0.0)CS(0.99)DDDNQGS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GPATCH4 50608.5 13 2 2093.1 97.96 HUMAN 1 -13.5243 -12.3344 NKDPRCLTPEPSPAL-p A1IGU5;T590-p NKDPRCLTPEPSPAL 0.214734983572386 0.169808560434942 0.243 0.138666666666667 12.8767688120979 10.1247397735982 0.243 0.138666666666667 0.0515612121715157 0.0971686172630225 2.48888485601755 2.00256936691134 A1IGU5 ARHGEF37 A1IGU5.T590.p_ARHGEF37 A1IGU5_T590t _1_1_590_590 A1IGU5 A1IGU5 Rho guanine nucleotide exchange factor 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36808.36808.3 25.73 25.73 2.767 5 1 1 0 1150.2573 3368.7948 T590t TMT10 588 (R) CLtPEPSPALVPSIPTMNQVIAAYPFVAR (S) CLT(0.99)PEPS(0.0)PALVPS(0.0)IPT(0.0)MNQVIAAY(0.0)PFVAR C:Carbamidomethylation,t:Phosphorylated T ARHGEF37 76676.1 3 2 2088.2 98.03 HUMAN 1 12.8768 10.1247 NKEEDCHSPTSKPPK-p P23588;S459-p NKEEDCHSPTSKPPK 0.187294971032731 0.00413791477536262 -0.228666666666667 -0.644333333333333 14.2766152055422 35.0830829539105 -0.228666666666667 -0.644333333333333 0.0373541174046049 0.000310235651667903 -2.74384841436083 -8.12484970227578 P23588 EIF4B P23588.S459.p_EIF4B P23588_S459s _1_1_459_459 P23588 E7EX17|P23588|P23588-2 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9594.9594.5 18.24 18.24 4.936 3 1 1 0 638.1393 3106.7013 S459s TMT10 454 (K) EEDCHsPTSKPPKPDQPLK (V) EEDCHS(0.99)PT(0.0)S(0.0)KPPKPDQPLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EIF4B 69207 8 16 146.1 516.36 HUMAN 1 -14.2766 -35.0831 NKEEGSLSDTEADAV-p Q8N1G4;S520-p NKEEGSLSDTEADAV 0.595703687719654 0.0618181426237541 -0.0843333333333333 0.220333333333333 4.15119828860587 16.0929815921366 -0.0843333333333334 0.220333333333333 0.384485681600347 0.02458679050544 -0.945923177870631 3.08386936910187 Q8N1G4 LRRC47 Q8N1G4.S520.p_LRRC47 Q8N1G4_S520s _1_1_520_520 Q8N1G4 Q8N1G4 Leucine-rich repeat-containing protein 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21432.21911.4 22.02 19.78 1.164 9 1 1 0 1073.0267 4209.129 S520s TMT10 509 (K) YTLENKEEGSLsDTEADAVSGQLPDPTTNPSAGK (D) Y(0.0)T(0.0)LENKEEGS(0.0)LS(0.99)DT(0.0)EADAVS(0.0)GQLPDPT(0.0)T(0.0)NPS(0.0)AGK K:TMT10,s:Phosphorylated S LRRC47 64042.3 22 5 814.1 220.85 HUMAN 1 -4.1512 16.093 NKEKKAVSPLLLTTT-p P19525;S83-p NKEKKAVSPLLLTTT 0.650945476037125 0.0757387426717088 0.0623333333333333 -0.204 3.49814002984016 14.8755881657804 0.0623333333333333 -0.204 0.446874936071092 0.032541770913605 0.819894793892231 -2.85330704804269 P19525 EIF2AK2 P19525.S83.p_EIF2AK2 P19525_S83s _1_1_83_83 P19525 P19525|P19525-2 Interferon-induced, double-stranded RNA-activated protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32003.32003.4 23.69 23.69 5.679 8 1 1 0 872.7221 3407.8972 S83s TMT10 80 (K) KAVsPLLLTTTNSSEGLSMGNYIGLINR (I) KAVS(0.99)PLLLT(0.0)T(0.0)T(0.0)NS(0.0)S(0.0)EGLS(0.0)MGNY(0.0)IGLINR K:TMT10,s:Phosphorylated S EIF2AK2 62549.6 25 1 2106.1 97.45 HUMAN 1 3.4981 -14.8756 NKFAAHISPAQGSPK-p B0QYS7;S195-p NKFAAHISPAQGSPK 0.159989844318927 0.0816154540949912 -0.256 -0.339 15.9304539097755 14.4275214986299 -0.253177981741856 -0.339 0.0255243451697222 0.0360784482552314 -3.05484806574515 -2.77003236175769 B0QYS7 NotFound B0QYS7.S195.p_NotFound B0QYS7_S195sS208s_2_2_195_208 B0QYS7 B0QYS7|B0QYS6|P19484 Transcription factor EB HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15852.15852.4 11.49 11.49 1.613 3 2 2 0 715.3676 2698.5193 S195s S208s TMT10 190 (K) FAAHIsPAQGSPKPPPAAsPGVR (A) FAAHIS(0.99)PAQGS(0.0)PKPPPAAS(0.99)PGVR K:TMT10,s:Phosphorylated S TFEB 62317.7 1 4 2189.1 94.02 HUMAN 1 -15.9305 -14.4275 NKFEDEDSDDVPRKR-p P49756;S703-p NKFEDEDSDDVPRKR 0.254996768567997 0.917369744589267 0.188 -0.0116666666666667 11.2899401459558 0.52702923886418 0.188 -0.0116666666666667 0.0743029378184944 0.885721274121634 2.20698445588973 -0.150618864728682 P49756 RBM25 P49756.S703.p_RBM25 P49756_S703s _1_1_703_703 P49756 P49756 RNA-binding protein 25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25282.25282.5 22.9 22.9 11.596 2 1 1 0 644.5313 3138.6562 S703s TMT10 688 (K) KLPVDSVFNKFEDEDsDDVPR (K) KLPVDS(0.0)VFNKFEDEDS(0.99)DDVPR K:TMT10,s:Phosphorylated S RBM25 100526.1 17 4 353.1 350.09 HUMAN 1 11.2899 -0.527 NKFSHVDSPNSECKG-p Q5T5P2;S1551-p NKFSHVDSPNSECKG 0.740973161542071 0.843211385550968 -0.0906666666666667 0.0293333333333333 2.47043803227473 1.04028052347261 -0.0906666666666667 0.0293333333333333 0.566182180650676 0.786994953753862 -0.610635496582672 0.283923955826207 Q5T5P2 KIAA1217 Q5T5P2.S1551.p_KIAA1217 Q5T5P2_S1551s_1_1_1551_1551 Q5T5P2 Q5T5P2|Q5T5P2-3 Sickle tail protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13168.13168.5 15.23 15.23 1.226 5 1 1 0 791.1848 3870.9262 S1551s N1553n TMT10 1546 (K) FSHVDsPnSECKGEDATDDQFESPKK (K) FS(0.0)HVDS(0.99)PN(1.0)S(0.0)ECKGEDAT(0.0)DDQFES(0.0)PKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated KIAA1217 214739.6 2 14 303.1 376.04 HUMAN 1 -2.4704 1.0403 NKGKHGFSDNQKLWE-p Q8WW12;S156-p NKGKHGFSDNQKLWE 0.123544777002614 0.205992828730006 0.288666666666667 -0.221333333333333 18.8877303690348 9.02944798384626 0.288666666666667 -0.221333333333333 0.0129189424354015 0.125041795626301 3.64420658267843 -1.81280623913477 Q8WW12 PCNP Q8WW12.S156.p_PCNP Q8WW12_S156s _1_1_156_156 Q8WW12 Q8WW12 PEST proteolytic signal-containing nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6067.6067.3 12.27 12.27 99 1 1 1 0 629.0038 1805.0273 S156s TMT10 151 (K) GKHGFsDNQK (L) GKHGFS(1.0)DNQK K:TMT10,s:Phosphorylated S PCNP 18924.5 1 9 1455.1 140.6 HUMAN 1 18.8877 -9.0294 NKGLLSDSMTDVPVD-p O43399-2;S21-p NKGLLSDSMTDVPVD 0.276322361958096 0.0311595572411858 0.192333333333333 0.302 10.561220934876 20.3515267147598 0.192333333333333 0.302 0.0878775431397475 0.00922247164256995 2.07940513860701 3.95102085746481 O43399 TPD52L2 O43399.2.S21.p_TPD52L2 O43399-2_S21s_1_1_21_21 O43399-2 O43399-7|A0A087WYR3|O43399-5|O43399-3|O43399-4|O43399-2|A0A087WZ51 Isoform 2 of Tumor protein D54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21095.21095.2 14.43 14.43 1.452 4 1 1 0 1115.0371 2133.1059 S21s M22m TMT10 16 (K) GLLSDsmTDVPVDTGVAAR (T) GLLS(0.0)DS(0.99)M(1.0)T(0.0)DVPVDT(0.0)GVAAR s:Phosphorylated S,m:Oxidized methionine TPD52L2 19957.8 11 11 793.1 224.4 HUMAN 1 10.5612 20.3515 NKGQLTKSPLAQMEE-p E7EPK1;S334-p NKGQLTKSPLAQMEE 0.203469268152067 0.632379182346825 -0.335 -0.0483333333333333 13.3997776485602 2.70496467338765 -0.335 -0.0483333333333333 0.0457111592357277 0.536418234784239 -2.58336046134727 -0.659735156830181 E7EPK1 NotFound E7EPK1.S334.p_NotFound E7EPK1_S334s _1_1_334_334 E7EPK1 Q16181|E7EPK1|Q16181-2|E7ES33|G3V1Q4 Septin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10931.10931.5 14.79 14.79 99 1 1 1 0 490.4549 2368.2807 S334s TMT10 334 (K) sPLAQMEEERREHVAK (M) S(1.0)PLAQMEEERREHVAK K:TMT10,s:Phosphorylated S SEPT7 50979.3 16 3 1055.1 182.7 HUMAN 1 -13.3998 -2.705 NKGTPSQSPVVGRSQ-p P52594-4;S181-p NKGTPSQSPVVGRSQ 0.213229385106179 0.662918383677598 0.206666666666667 -0.065 12.9461247282886 2.44544900777493 0.206666666666667 -0.065 0.0507443305226607 0.569449346934508 2.50136340497783 -0.605260268670478 P52594 AGFG1 P52594.4.S181.p_AGFG1 P52594-4_S181s _1_1_181_181 P52594-4 P52594-4|P52594-3|B8ZZY2|P52594-2 Isoform 4 of Arf-GAP domain and FG repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6517.6517.3 14.23 14.23 2.592 3 1 1 0 465.239 1313.7375 S181s TMT10 176 (K) GTPSQsPVVGR (S) GT(0.0)PS(0.0)QS(0.99)PVVGR s:Phosphorylated S AGFG1 61108.2 4 4 2791.1 70.5 HUMAN 1 12.9461 -2.4454 NKHGWTWSVPKFMKR-p Q9Y3M8;S642-p NKHGWTWSVPKFMKR 0.219241390692771 0.283044454425062 -0.354 -0.145 12.6938355766576 7.22821470793245 -0.354 -0.145 0.0537794606413899 0.189312168069243 -2.45604131275387 -1.50047664263116 Q9Y3M8 STARD13 Q9Y3M8.S642.p_STARD13 Q9Y3M8_S642s _1_1_642_642 Q9Y3M8 Q9Y3M8|Q9Y3M8-2|Q9Y3M8-4|Q9Y3M8-3|Q9Y3M8-5 StAR-related lipid transfer protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19523.19523.3 11.78 11.78 2.496 2 1 1 0 545.9553 1555.8786 S642s TMT10 637 (K) HGWTWsVPK (F) HGWT(0.0)WS(0.99)VPK K:TMT10,s:Phosphorylated S STARD13 126277.4 1 12 564.1 271.22 HUMAN 1 -12.6938 -7.2282 NKHLRIHSDERPFKC-p Q9NTW7;S226-p NKHLRIHSDERPFKC 0.954578198037871 0.0106837840855859 0.00866666666666666 -0.454 0.396439617906848 27.6418742355254 0.00866666666666667 -0.454 0.912758819945804 0.00172112564797966 0.114779391171302 -5.73736383112852 Q9NTW7 ZFP64 Q9NTW7.S226.p_ZFP64 Q9NTW7_S226s _1_1_226_226 Q9NTW7 Q9NPA5|Q9NTW7-4|Q9NPA5-2|Q9NTW7-3 Zinc finger protein 64 homolog, isoforms 3 and 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8446.8447.3 14.21 10.91 99 1 1 1 0 556.2961 1586.9055 S226s TMT10 224 (R) IHsDERPFK (C) IHS(1.0)DERPFK K:TMT10,s:Phosphorylated S ZFP64 74612 1 3 3993.1 39.5 HUMAN 1 0.3964 -27.6419 NKHQNLNSVDLQNAA-p Q52LW3;S98-p NKHQNLNSVDLQNAA 0.466667919827382 0.00752314179680432 -0.188 -0.466 6.11114098528363 30.3576166628285 -0.188 -0.466 0.244841990461648 0.000920954838070205 -1.30433832428737 -6.53115632086613 Q52LW3 ARHGAP29 Q52LW3.S98.p_ARHGAP29 Q52LW3_S98s _1_1_98_98 Q52LW3 Q52LW3 Rho GTPase-activating protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25722.25722.3 17.24 17.24 10.325 2 1 1 0 879.1145 2555.3652 S98s TMT10 93 (K) HQNLNsVDLQNAAEMLTAK (V) HQNLNS(0.99)VDLQNAAEMLT(0.0)AK K:TMT10,s:Phosphorylated S ARHGAP29 143601.5 1 2 517.1 284.75 HUMAN 1 -6.1111 -30.3576 NKIHSLCYNDCTFSR-p Q6UXG2;Y655-p NKIHSLCYNDCTFSR 0.282495710935346 0.203997134658525 0.193333333333333 0.129333333333333 10.379619373827 9.08338191207207 0.193333333333333 0.129333333333333 0.0916300793417536 0.123498535847416 2.04774745923514 1.82213568136194 Q6UXG2 KIAA1324 Q6UXG2.Y655.p_KIAA1324 Q6UXG2_Y655y _1_1_655_655 Q6UXG2 Q6UXG2|Q6UXG2-4|Q6UXG2-2|Q6UXG2-3 UPF0577 protein KIAA1324 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.15162.15162.3 23.64 23.64 10.235 4 1 1 0 661.2887 1901.8836 Y655y TMT10 650 (K) IHSLCyNDCTFSR (N) IHS(0.0)LCY(0.99)NDCT(0.0)FS(0.0)R C:Carbamidomethylation,y:Phosphorylated Y KIAA1324 114517.5 2 1 138.1 23.64 HUMAN 1 10.3796 9.0834 NKIIEQLSPQAATSR-p Q03468;S158-p NKIIEQLSPQAATSR 0.689722418493103 0.0375235639276589 -0.0543333333333333 -0.276333333333333 3.02340757785238 19.1534039069162 -0.0543333333333334 -0.276333333333333 0.498493204344487 0.0121523315362704 -0.725162643960424 -3.69629772788018 Q03468 ERCC6 Q03468.S158.p_ERCC6 Q03468_S158s _1_1_158_158 Q03468 Q03468|P0DP91 DNA excision repair protein ERCC-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17542.17542.2 16.26 12.98 3.893 3 1 1 0 861.9539 1642.9326 S158s TMT10 153 (K) IIEQLsPQAATSR (D) IIEQLS(0.99)PQAAT(0.0)S(0.0)R s:Phosphorylated S ERCC6 169554.2 3 2 403.1 327.23 HUMAN 1 -3.0234 -19.1534 NKINNRASEEAFVKE-p P09497-2;S157-p NKINNRASEEAFVKE 0.129751256844141 0.104394681713601 -0.43 -0.184333333333333 18.3531350150592 12.9647760817108 -0.43 -0.184333333333333 0.0146112206241707 0.0505268695463471 -3.53408887054317 -2.50335265070521 P09497 CLTB P09497.2.S157.p_CLTB P09497-2_S157s _1_1_157_157 P09497-2 P09497-2 Isoform Non-brain of Clathrin light chain B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13310.13310.3 8.69 8.69 99 1 1 1 0 639.3401 1836.038 S157s TMT10 152 (K) INNRAsEEAFVK (E) INNRAS(1.0)EEAFVK K:TMT10,s:Phosphorylated S CLTB 23294.9 1 1 4535.1 30.24 HUMAN 1 -18.3531 -12.9648 NKKDHSDSDDQMLVA-p Q9NW75;S117-p NKKDHSDSDDQMLVA 0.235621777934373 0.927601724721068 -0.210666666666667 0.00966666666666671 12.0267021133781 0.459809520281858 -0.210666666666667 0.00966666666666672 0.062708987493314 0.899537033977708 -2.33707167658707 0.132274908320384 Q9NW75 GPATCH2 Q9NW75.S117.p_GPATCH2 Q9NW75_S115sS117s_2_2_115_117 Q9NW75 Q9NW75|Q9NW75-2 G patch domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10133.10133.4 12.65 8.46 99 2 2 2 0 613.7906 2276.216 S115s S117s M121m TMT10 112 (K) KDHsDsDDQmLVAK (R) KDHS(1.0)DS(1.0)DDQM(1.0)LVAK K:TMT10,s:Phosphorylated S,m:Oxidized methionine GPATCH2 59341.9 15 8 1558.1 131.71 HUMAN 1 -12.0267 0.4598 NKKDITTSADQIAEV-p F5H527;S514-p NKKDITTSADQIAEV 0.885085103006421 0.967738883207385 -0.0236666666666667 -0.00499999999999997 1.04701292678399 0.201741897894424 -0.0236666666666667 -0.00499999999999996 0.785775904691967 0.954609627893988 -0.285629903948038 -0.0595995654636786 F5H527 SSH2 F5H527.S514.p_SSH2 F5H527_S514s _1_1_514_514 F5H527 F5H527|Q76I76 Protein phosphatase Slingshot homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18915.18915.2 13.73 13.73 1.133 3 1 1 0 965.0029 1849.0319 S514s TMT10 510 (K) DITTsADQIAEVK (T) DIT(0.0)T(0.0)S(0.99)ADQIAEVK K:TMT10,s:Phosphorylated S SSH2 162969.8 4 3 998.1 190.13 HUMAN 1 -1.047 -0.2017 NKKFDHESSPGTDED-p Q13427;S744-p NKKFDHESSPGTDED 0.515467060998099 0.0937899460242387 -0.103333333333333 0.190333333333333 5.31548979304402 13.5936962991871 -0.103333333333333 0.190333333333333 0.294070202556373 0.0437149886616258 -1.16157180616798 2.61710334197227 Q13427 PPIG Q13427.S744.p_PPIG Q13427_S744sS745sT748t_3_3_744_748 Q13427 Q13427|E9PG73 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8836.8836.4 11.22 11.22 99 3 3 3 0 748.348 2750.4767 S744s S745s T748t TMT10 737 (K) NKKFDHEssPGtDEDK (S) NKKFDHES(1.0)S(1.0)PGT(1.0)DEDK K:TMT10,s:Phosphorylated S,t:Phosphorylated T PPIG 89129.1 28 28 112.1 571.91 HUMAN 1 -5.3155 13.5937 NKKLKKASAEGPLLG-p Q9BRJ6;S23-p NKKLKKASAEGPLLG 0.463382860142128 0.0855947378764516 -0.162 -0.231333333333333 6.1627329282152 14.1280794167675 -0.162 -0.231333333333333 0.241950602088878 0.0386537878152621 -1.31350174433361 -2.71481786569677 Q9BRJ6 C7orf50 Q9BRJ6.S23.p_C7orf50 Q9BRJ6_S23s _1_1_23_23 Q9BRJ6 Q9BRJ6 Uncharacterized protein C7orf50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20397.20397.5 21.78 19.67 19.981 4 1 1 0 1025.1307 5041.6685 S23s TMT10 21 (K) KAsAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPEEQR (V) KAS(0.99)AEGPLLGPEAAPS(0.0)GEGAGS(0.0)KGEAVLRPGLDAEPELS(0.0)PEEQR K:TMT10,s:Phosphorylated S C7orf50 22140 1 1 1700.1 120.32 HUMAN 1 -6.1627 -14.1281 NKKRGLRTPPKSHNG-p Q8NDL9;T619-p NKKRGLRTPPKSHNG 0.271400368753456 0.00265487479708047 -0.219666666666667 -0.69 10.7328967915885 39.1672350598551 -0.219666666666667 -0.69 0.08447152229381 0.000121136910745265 -2.10937818407701 -9.76302997912615 Q8NDL9 AGBL5 Q8NDL9.T619.p_AGBL5 Q8NDL9_T619t _1_1_619_619 Q8NDL9 Q8NDL9|Q8NDL9-2|Q8NDL9-3 Cytosolic carboxypeptidase-like protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7571.7571.3 9.31 2.81 99 1 1 1 0 436.2593 1226.7985 T619t TMT10 616 (R) GLRtPPK (S) GLRT(1.0)PPK K:TMT10,t:Phosphorylated T AGBL5 98730.3 1 2 3996.1 39.47 HUMAN 1 -10.7329 -39.1672 NKLDSQVSPKLGLLR-p Q5FWF5;S412-p NKLDSQVSPKLGLLR 0.453195332145344 0.0195027178073363 0.102 -0.535 6.34224306938799 23.4752293537778 0.102 -0.535 0.232153744550372 0.00449238599457349 1.34531026702003 -4.66231657421685 Q5FWF5 ESCO1 Q5FWF5.S412.p_ESCO1 Q5FWF5_S412s _1_1_412_412 Q5FWF5 Q5FWF5|Q5FWF5-2 N-acetyltransferase ESCO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12335.12335.4 12.69 12.69 2.739 3 1 1 0 649.6041 2515.4236 S412s TMT10 399 (K) FNSVQHNKLDSQVsPK (L) FNS(0.0)VQHNKLDS(0.0)QVS(0.99)PK K:TMT10,s:Phosphorylated S ESCO1 96179.3 1 5 1971.1 104.85 HUMAN 1 6.3422 -23.4752 NKLFQLPTPPLSRHQ-p Q9Y6K0;T40-p NKLFQLPTPPLSRHQ 0.918430174900821 0.688659328084415 0.0163333333333333 -0.0673333333333333 0.719947591530911 2.21899789467917 0.0163333333333333 -0.0673333333333333 0.847237638115689 0.599929489982565 0.202075540266202 -0.556705137665342 Q9Y6K0 CEPT1 Q9Y6K0.T40.p_CEPT1 Q9Y6K0_T40t _1_1_40_40 Q9Y6K0 Q9Y6K0|A0A0C4DGS9 Choline/ethanolaminephosphotransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30918.31124.3 13.99 13.99 6.974 2 1 1 0 526.6265 1497.8991 T40t TMT10 35 (K) LFQLPtPPLSR (H) LFQLPT(0.99)PPLS(0.0)R t:Phosphorylated T CEPT1 47465.6 3 2 3324.1 53.93 HUMAN 1 0.7199 -2.219 NKLGYLVSPPQQIRR-p Q7Z6E9;S516-p NKLGYLVSPPQQIRR 0.813083216141779 0.0480181724894645 0.0343333333333333 -0.243333333333333 1.72522627197996 17.638231398433 0.0343333333333333 -0.243333333333333 0.672167287578592 0.0172256992389741 0.447053371920411 -3.38671415253028 Q7Z6E9 RBBP6 Q7Z6E9.S516.p_RBBP6 Q7Z6E9_S516s _1_1_516_516 Q7Z6E9 Q7Z6E9|Q7Z6E9-2 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23714.23920.3 15.13 15.13 15.128 2 1 1 0 560.6411 1599.942 S516s TMT10 511 (K) LGYLVsPPQQIR (R) LGY(0.0)LVS(0.99)PPQQIR s:Phosphorylated S RBBP6 202473.6 6 4 27.1 935.6 HUMAN 1 1.7252 -17.6382 NKLKPPGTPPPSSRK-p Q6VAB6;T290-p NKLKPPGTPPPSSRK 0.319669507135721 0.618028835500003 0.187 0.0536666666666667 9.2738239496544 2.84068149219345 0.187 0.0536666666666667 0.118200034970373 0.5199144054877 1.85577403843555 0.687769253939046 Q6VAB6 KSR2 Q6VAB6.T290.p_KSR2 Q6VAB6_T290t _1_1_290_290 Q6VAB6 Q6VAB6|E9PB13 Kinase suppressor of Ras 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9483.9693.3 9.88 5.44 2.699 3 1 1 0 591.3365 1692.0209 T290t TMT10 285 (K) LKPPGtPPPSSR (K) LKPPGT(0.99)PPPS(0.0)S(0.0)R K:TMT10,t:Phosphorylated T KSR2 108999.7 1 1 6736.1 9.88 HUMAN 1 9.2738 2.8407 NKLLGKVTIAQGGVL-p A0A0U1RRH7;T102-p NKLLGKVTIAQGGVL 0.43773303002828 0.253620404035816 0.137666666666667 0.119666666666667 6.60706968597825 7.84653572864246 0.137666666666667 0.119666666666667 0.218420316159229 0.164189895758506 1.39204188928555 1.608027500109 A0A0U1RRH7 NotFound A0A0U1RRH7.T102.p_NotFound A0A0U1RRH7_T102t _1_1_102_102 A0A0U1RRH7 A0A0U1RRH7|A0A0U1RR32|P20671|P0C0S8|Q6FI13|Q9BTM1|Q16777|Q96KK5|Q99878 Histone H2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36343.36343.4 18.68 18.68 99 1 1 1 0 778.2323 3029.9422 T102t TMT10 97 (K) LLGKVtIAQGGVLPNIQAVLLPK (K) LLGKVT(1.0)IAQGGVLPNIQAVLLPK K:TMT10,t:Phosphorylated T HIST1H3D 18552.3 1 2 3203.2 57.59 HUMAN 1 6.6071 7.8465 NKLNSEASPSREAIN-p Q13111;S141-p NKLNSEASPSREAIN 0.134738301810513 0.347177365537144 -0.383666666666667 -0.121 17.8591599450432 6.09097173525579 -0.383666666666667 -0.121 0.0163713316114638 0.245981715771354 -3.43381790152015 -1.3004394965141 Q13111 CHAF1A Q13111.S141.p_CHAF1A Q13111_S141s_1_1_141_141 Q13111 Q13111|Q13111-3|Q13111-2 Chromatin assembly factor 1 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14772.14772.4 17.45 14.63 1.148 4 1 1 0 863.933 3371.7555 S141s N148n TMT10 136 (K) LNSEAsPSREAInGQREDTGDQQGLLK (A) LN(0.0)S(0.0)EAS(0.99)PS(0.0)REAIN(0.99)GQREDT(0.0)GDQQGLLK K:TMT10,s:Phosphorylated S,n:Deamidated CHAF1A 108122.1 8 4 633.1 256.49 HUMAN 1 -17.8592 -6.091 NKLSKIPSTPKLIPK-p B5MBZ0;S200-p NKLSKIPSTPKLIPK 0.106447952251166 0.202705281733915 0.309666666666667 0.154666666666667 20.4849191385703 9.11874107079172 0.309666666666667 0.154666666666667 0.0089435118373108 0.122497124144084 3.98380076401735 1.82825241928575 B5MBZ0 EML4 B5MBZ0.S200.p_EML4 B5MBZ0_S200sT201t_2_2_200_201 B5MBZ0 B5MBZ0|Q9HC35|Q9HC35-2 Echinoderm microtubule-associated protein-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23200.23200.4 8.67 8.67 3.867 3 2 2 0 625.379 2338.5607 S200s T201t TMT10 195 (K) LSKIPstPKLIPK (V) LS(0.0)KIPS(0.99)T(0.99)PKLIPK K:TMT10,s:Phosphorylated S,t:Phosphorylated T EML4 111259.7 3 14 586.1 265.11 HUMAN 1 20.4849 9.1187 NKLTPPESQSPLHWL-p Q15652;S2005-p NKLTPPESQSPLHWL 0.78149643092872 0.344073057628201 0.047 0.109666666666667 2.05444745496854 6.13789416636231 0.047 0.109666666666667 0.623096417818958 0.243338363699432 0.520826338959329 1.30877320833591 Q15652 JMJD1C Q15652.S2005.p_JMJD1C Q15652_S2005sS2007s_2_2_2005_2007 Q15652 Q15652|Q15652-3|A0A1W2PNZ9 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34807.34807.4 13.78 13.78 1.133 7 2 2 0 1138.8068 4392.2563 S2005s S2007s TMT10 1985 (K) NGGSSPESDVGTDNKLTPPEsQsPLHWLADLAEQK (A) NGGS(0.0)S(0.0)PES(0.0)DVGT(0.0)DNKLT(0.0)PPES(0.99)QS(0.99)PLHWLADLAEQK K:TMT10,s:Phosphorylated S JMJD1C 286573.8 3 22 377.1 336.35 HUMAN 1 2.0544 6.1379 NKLTRQESCLGNSPP-p Q86W56;S286-p NKLTRQESCLGNSPP 0.446920841258647 0.360376815650301 0.146 0.123 6.45126010320837 5.88191235695508 0.146 0.123 0.226398731752778 0.258112337762748 1.36457418750757 1.26320357921194 Q86W56 BPHL Q86W56.S286.p_BPHL Q86W56_S286s_1_1_286_286 Q86W56 Q86W56|Q86W56-2|Q86W56-3 Poly(ADP-ribose) glycohydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21154.21154.2 13.54 13.54 3.246 2 1 1 0 892.8925 1721.8366 Q284q S286s Hydrogen 284 (R) qEsCLGNSPPFEK (E) Q(1.0)ES(0.99)CLGNS(0.0)PPFEK C:Carbamidomethylation,K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S PARG 112534.8 9 5 855.1 211.13 HUMAN 1 6.4513 5.8819 NKMAKTQSQPILNTK-p Q14721;S541-p NKMAKTQSQPILNTK 0.667053381707024 0.573763212763696 0.0586666666666667 -0.0623333333333333 3.28691227736561 3.25291365153723 0.0586666666666667 -0.0623333333333333 0.469146814980531 0.472833931524002 0.778108575430737 -0.771216417242248 Q14721 KCNB1 Q14721.S541.p_KCNB1 Q14721_S541s _1_1_541_541 Q14721 Q14721 Potassium voltage-gated channel subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13562.13562.3 9.59 7.15 2.123 3 1 1 0 556.6422 1587.947 S541s TMT10 539 (K) TQsQPILNTK (E) T(0.0)QS(0.99)QPILNT(0.0)K K:TMT10,s:Phosphorylated S KCNB1 96731.7 1 3 2926.1 65.77 HUMAN 1 3.2869 -3.2529 NKMQNHGYENPTYKY-p Q06481-6;Y748-p NKMQNHGYENPTYKY 0.681251800413115 0.0157613953365658 0.0966666666666667 -0.660666666666667 3.12787845141638 24.9144082672412 0.0966666666666667 -0.660666666666667 0.486644875902628 0.00322521873027983 0.746268299039549 -5.01589908148054 Q06481 APLP2 Q06481.6.Y748.p_APLP2 Q06481-6_Y748y _1_1_748_748 Q06481-6 Q06481|Q06481-6|Q06481-3|Q06481-2|Q06481-4|Q06481-5 Isoform 6 of Amyloid-like protein 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.9682.9730.3 22.76 15.11 22.761 3 1 1 0 673.9846 1939.9737 Y748y TMT10 743 (K) MQNHGyENPTYK (Y) MQNHGY(0.99)ENPT(0.0)Y(0.0)K K:TMT10,y:Phosphorylated Y APLP2 88411.7 6 1 131.1 24.2 HUMAN 1 3.1279 -24.9144 NKNGRRTSSTLDSEG-p Q92609-2;S43-p NKNGRRTSSTLDSEG 0.83932781439026 0.597637093722794 -0.0306666666666667 0.0583333333333334 1.47182993746588 3.02713935480971 -0.0306666666666667 0.0583333333333334 0.712552726591891 0.498065046373017 -0.388375481832411 0.725816835293129 Q92609 TBC1D5 Q92609.2.S43.p_TBC1D5 Q92609-2_S43s _1_1_43_43 Q92609-2 Q92609|Q92609-2 Isoform 2 of TBC1 domain family member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8696.8696.3 11.13 11.13 1.11 8 1 1 0 753.3603 2178.0988 S43s Hydrogen 41 (R) RTsSTLDSEGTFNSYRK (E) RT(0.0)S(0.99)S(0.0)T(0.0)LDS(0.0)EGT(0.0)FNS(0.0)Y(0.0)RK K:TMT10-Lys-Only,s:Phosphorylated S TBC1D5 91784.7 20 1 328.1 359.68 HUMAN 1 -1.4718 3.0271 NKNKLNMSF______-p Q5VT97;S1193-p NKNKLNMSF______ 0.896679030459904 0.00298393706599723 -0.0243333333333333 -0.774333333333333 0.928956453278088 37.9367626977499 -0.0243333333333333 -0.774333333333333 0.80742902043743 0.000160813953991694 -0.255961719238648 -9.24097313970916 Q5VT97 SYDE2 Q5VT97.S1193.p_SYDE2 Q5VT97_S1193s _1_1_1193_1193 Q5VT97 Q5VT97 Rho GTPase-activating protein SYDE2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20189.20189.2 8.79 8.79 99 1 1 1 0 696.3627 1311.7495 S1193s TMT10 1188 (K) NKLNMsF (-) NKLNMS(1.0)F K:TMT10,s:Phosphorylated S SYDE2 134825.4 1 6 2624.1 76.52 HUMAN 1 -0.929 -37.9368 NKNSDGGSDPETQKE-p O75554;S262-p NKNSDGGSDPETQKE 0.0360407965324359 0.0371322215338866 0.988666666666667 -0.536333333333333 33.3398108552741 19.2274909131953 0.988666666666667 -0.536333333333333 0.000463467104300717 0.0119467811676922 7.51623987377193 -3.71178457561909 O75554 WBP4 O75554.S262.p_WBP4 O75554_S262s _1_1_262_262 O75554 O75554|O75554-2 WW domain-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5739.5739.2 15.12 12.04 2.558 3 1 1 0 886.9093 1692.8441 S262s TMT10 257 (K) NSDGGsDPETQK (E) NS(0.0)DGGS(0.99)DPET(0.0)QK K:TMT10,s:Phosphorylated S WBP4 42677.2 7 1 2955.1 64.79 HUMAN 1 33.3398 -19.2275 NKNVALLSQLYHSPA-p Q15717;S197-p NKNVALLSQLYHSPA 0.470423731861295 0.866949400156831 0.0956666666666666 0.0233333333333334 6.04428584081618 0.873287429988088 0.0956666666666667 0.0233333333333334 0.2486402397679 0.817845478494945 1.29244891491689 0.241761334163066 Q15717 ELAVL1 Q15717.S197.p_ELAVL1 Q15717_S197s _1_1_197_197 Q15717 Q15717-2 ELAV-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23118.23118.3 18.24 18.24 5.551 3 1 1 0 626.665 1798.0173 S197s TMT10 192 (K) NVALLsQLYHSPAR (R) NVALLS(0.99)QLY(0.0)HS(0.0)PAR s:Phosphorylated S ELAVL1 36262.4 1 2 2463.1 82.23 HUMAN 1 6.0443 0.8733 NKPGPYSSVPPPSAP-p Q14978-3;S292-p NKPGPYSSVPPPSAP 0.626617753150603 0.94685717153164 0.0796666666666667 0.018 3.77069256924224 0.339011280313246 0.0796666666666667 0.0180000000000001 0.419692050379165 0.924908715726441 0.87303541593658 0.0987185789649621 Q14978 NOLC1 Q14978.3.S292.p_NOLC1 Q14978-3_S292s _1_1_292_292 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12320.12320.5 15.66 15.66 1.219 4 1 1 0 589.1396 2861.7059 S292s TMT10 285 (K) NKPGPYSsVPPPSAPPPKK (S) NKPGPY(0.0)S(0.0)S(0.99)VPPPS(0.0)APPPKK K:TMT10,s:Phosphorylated S NOLC1 73744 1 5 72.1 655.55 HUMAN 1 3.7707 0.339 NKPKDKVSLIKDE__-p O00186;S587-p NKPKDKVSLIKDE__ 0.0574699311028016 0.437660578352249 -0.420333333333333 -0.085 27.1251187542621 4.78097494294083 -0.420333333333333 -0.085 0.00193859962581155 0.332584883295687 -5.60293287078926 -1.06355635348888 O00186 STXBP3 O00186.S587.p_STXBP3 O00186_S587s _1_1_587_587 O00186 O00186 Syntaxin-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16419.16419.3 10.4 10.4 99 1 1 1 0 605.348 1734.0616 S587s TMT10 584 (K) DKVsLIKDE (-) DKVS(1.0)LIKDE K:TMT10,s:Phosphorylated S STXBP3 68675.9 2 3 3547.1 48.5 HUMAN 1 -27.1251 -4.781 NKPKGQNSLALHKVI-p P11233;S11-p NKPKGQNSLALHKVI 0.959344047178047 0.190013173716585 -0.00766666666666668 0.157 0.348464852860722 9.48403075502571 -0.00766666666666667 0.157 0.922897595984906 0.112615177191606 -0.10138243921055 1.89146984989349 P11233 RALA P11233.S11.p_RALA P11233_S11s _1_1_11_11 P11233 P11233 Ras-related protein Ral-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9707.9707.3 12.32 12.32 99 1 1 1 0 502.6128 1425.8578 S11s TMT10 8 (K) GQNsLALHK (V) GQNS(1.0)LALHK K:TMT10,s:Phosphorylated S RALA 23737.5 1 1 4287.1 34.16 HUMAN 1 -0.3485 9.484 NKPKSEMTPEELQKR-p P62316;T12-p NKPKSEMTPEELQKR 0.442287289926351 0.0303766275012227 0.108 0.333666666666667 6.52910680673655 20.516116389116 0.108 0.333666666666667 0.222376719548106 0.00887949692324225 1.37830698990652 3.98674639179438 P62316 SNRPD2 P62316.T12.p_SNRPD2 P62316_T12t _1_1_12_12 P62316 P62316|K7ERG4 Small nuclear ribonucleoprotein Sm D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28860.28860.3 14.99 11.28 2.264 6 1 1 0 1368.3608 4023.1199 T12t TMT10 9 (K) SEMtPEELQKREEEEFNTGPLSVLTQSVK (N) S(0.0)EMT(0.99)PEELQKREEEEFNT(0.0)GPLS(0.0)VLT(0.0)QS(0.0)VK K:TMT10,t:Phosphorylated T SNRPD2 13640.8 9 2 3210.1 57.32 HUMAN 1 6.5291 20.5161 NKQEESESPVERPLK-p Q96SB4-3;S482-p NKQEESESPVERPLK 0.412161436237322 0.119966780701126 -0.219333333333333 -0.254 7.10109692628523 12.1421415573001 -0.219333333333333 -0.254 0.194935217680646 0.0610640836455057 -1.47869835168912 -2.35638001113142 Q96SB4 SRPK1 Q96SB4.3.S482.p_SRPK1 Q96SB4-3_S482s _1_1_482_482 Q96SB4-3 Q96SB4-3|Q96SB4-4 Isoform 1 of SRSF protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6967.6967.5 13.88 11.25 1.709 2 1 1 0 558.9082 2710.5455 S482s TMT10 473 (K) RPNKQEESEsPVERPLK (E) RPNKQEES(0.0)ES(0.99)PVERPLK K:TMT10,s:Phosphorylated S SRPK1 93208.6 12 3 1661.1 122.72 HUMAN 1 -7.1011 -12.1421 NKQEPGGSHGSETED-p Q9UKJ3;S650-p NKQEPGGSHGSETED 0.88602112979402 0.22101866054034 -0.021 0.152666666666667 1.03150061373606 8.63271409410147 -0.021 0.152666666666667 0.788587590592085 0.13700253104882 -0.281761466231807 1.74418466722802 Q9UKJ3 GPATCH8 Q9UKJ3.S650.p_GPATCH8 Q9UKJ3_S650sS653s_2_2_650_653 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10601.10601.4 18.89 18.89 1.176 7 2 2 0 927.8981 3548.6382 S650s S653s TMT10 630 (R) MDAPASGSACSGLNKQEPGGsHGsETEDTGR (S) MDAPAS(0.0)GS(0.0)ACS(0.0)GLNKQEPGGS(0.99)HGS(0.99)ET(0.0)EDT(0.0)GR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GPATCH8 165107.3 3 16 231.1 422.52 HUMAN 1 -1.0315 8.6327 NKQSFTQSLKRRISL-p A0A1B0GUA8;S1327-p NKQSFTQSLKRRISL 0.796313559448739 0.992282852266959 -0.0433333333333333 0.00133333333333336 1.90967553487456 0.0492164555091861 -0.0433333333333334 0.00133333333333338 0.644217393750308 0.988731463307995 -0.488704807366129 0.0147863585476943 A0A1B0GUA8 NotFound A0A1B0GUA8.S1327.p_NotFound A0A1B0GUA8_S1327s _1_1_1327_1327 A0A1B0GUA8 A0A1B0GUA8|Q9H1H9|Q9H1H9-2|Q9H1H9-4|Q9H1H9-3 Kinesin-like protein KIF13A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14301.14301.3 9.25 9.25 1.457 3 1 1 0 492.9338 1396.82 S1327s TMT10 1322 (K) QSFTQsLK (R) QS(0.0)FT(0.0)QS(0.99)LK K:TMT10,s:Phosphorylated S KIF13A 208874.1 1 6 1079.1 180.11 HUMAN 1 -1.9097 0.0492 NKQVSELSQLYKEAQ-p Q9P0K7;S649-p NKQVSELSQLYKEAQ 0.536103580898608 0.159188365613532 -0.102666666666667 -0.16 5.0117324621984 10.4996270343289 -0.102666666666667 -0.16 0.315374629834386 0.0891327480731406 -1.10620771351109 -2.0677787113988 Q9P0K7 RAI14 Q9P0K7.S649.p_RAI14 Q9P0K7_S649s _1_1_649_649 Q9P0K7 Q9P0K7-2|Q9P0K7-3|Q9P0K7-4 Ankycorbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21209.21209.3 9.71 9.71 4.238 3 1 1 0 578.3145 1652.9623 S649s TMT10 644 (K) QVSELsQLYK (E) QVS(0.0)ELS(0.99)QLY(0.0)K K:TMT10,s:Phosphorylated S RAI14 110666.9 1 17 498.1 292.24 HUMAN 1 -5.0117 -10.4996 NKRFSSLSYKSREED-p Q9NWQ8;S298-p NKRFSSLSYKSREED 0.695748590829669 0.0390317252508745 0.0643333333333333 -0.253666666666667 2.95920395520136 18.9136113934616 0.0643333333333333 -0.253666666666667 0.505917386182942 0.012842183188373 0.712113912219332 -3.6464030276488 Q9NWQ8 PAG1 Q9NWQ8.S298.p_PAG1 Q9NWQ8_S298s _1_1_298_298 Q9NWQ8 Q9NWQ8 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18412.18412.2 9.51 9.51 1.134 4 1 1 0 685.3626 1289.7506 S298s TMT10 294 (R) FSSLsYK (S) FS(0.0)S(0.0)LS(0.99)Y(0.0)K K:TMT10,s:Phosphorylated S PAG1 47436.2 1 6 1594.1 129.17 HUMAN 1 2.9592 -18.9136 NKRSRSGSQGRTDSV-p Q5VTL8;S475-p NKRSRSGSQGRTDSV 0.342628074928273 0.0583015154404338 0.134 0.253333333333333 8.63921990095722 16.4466248174578 0.134 0.253333333333333 0.136797452519007 0.0226640499283821 1.74591057139392 3.15211882755873 Q5VTL8 PRPF38B Q5VTL8.S475.p_PRPF38B Q5VTL8_S473sS475s_2_2_473_475 Q5VTL8 Q5VTL8|A0A0A0MRN0 Pre-mRNA-splicing factor 38B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4834.4834.2 11.01 7.1 5.095 4 2 2 0 820.3497 1479.7601 S473s S475s Hydrogen 473 (R) sGsQGRTDSVEK (S) S(0.99)GS(0.99)QGRT(0.0)DS(0.0)VEK K:TMT10-Lys-Only,s:Phosphorylated S PRPF38B 64695 4 6 2128.1 96.59 HUMAN 1 8.6392 16.4466 NKRSRSSSMSSLTGA-p Q96HA1;S393-p NKRSRSSSMSSLTGA 0.271389173621348 0.00880962755437148 -0.211333333333333 -0.474333333333333 10.7341193590688 29.1281255384087 -0.211333333333333 -0.474333333333333 0.0844477463523819 0.00122232711582981 -2.10959180189646 -6.1617827693708 Q96HA1 POM121 Q96HA1.S393.p_POM121 Q96HA1_S393s _1_1_393_393 Q96HA1 Q96HA1|Q96HA1-3|Q96HA1-2 Nuclear envelope pore membrane protein POM 121 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18362.18362.2 16.82 16.82 1.505 11 1 1 0 1121.5163 2162.0597 S393s TMT10 391 (R) SSsMSSLTGAYASGIPSSSR (N) S(0.0)S(0.0)S(0.99)MS(0.0)S(0.0)LT(0.0)GAY(0.0)AS(0.0)GIPS(0.0)S(0.0)S(0.0)R s:Phosphorylated S POM121 128174.4 6 45 133.1 532.02 HUMAN 1 -10.7341 -29.1281 NKRTAITTPNFKKLH-p Q9BXS6;T182-p NKRTAITTPNFKKLH 0.509312495674263 0.0057193778340584 0.130333333333333 -0.563 5.41065745603666 32.4697467255457 0.130333333333333 -0.563 0.287696285318664 0.00056627231228281 1.17880927445485 -7.20751316215126 Q9BXS6 NUSAP1 Q9BXS6.T182.p_NUSAP1 Q9BXS6_T182t _1_1_182_182 Q9BXS6 Q9BXS6|Q9BXS6-2|Q9BXS6-5 Nucleolar and spindle-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17363.17363.3 10.83 10.83 1.115 3 1 1 0 510.9498 1450.867 T182t TMT10 178 (R) TAITtPNFK (K) T(0.0)AIT(0.0)T(0.99)PNFK K:TMT10,t:Phosphorylated T NUSAP1 49622.1 5 3 1571.1 130.66 HUMAN 1 5.4107 -32.4697 NKSEDDESGAGELTR-p P33993;S314-p NKSEDDESGAGELTR 0.186317782283684 0.439848717563432 0.218666666666667 0.106333333333333 14.3427627601273 4.75147432971766 0.218666666666667 0.106333333333333 0.0367894863226051 0.334851745407127 2.7560704120129 1.05810627642815 P33993 MCM7 P33993.S314.p_MCM7 P33993_S314s _1_1_314_314 P33993 P33993|P33993-3|P33993-2 DNA replication licensing factor MCM7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12073.12087.4 13.28 9.46 2.893 3 1 1 0 701.8353 2724.3511 S314s TMT10 306 (K) MNKSEDDEsGAGELTREELR (Q) MNKS(0.0)EDDES(0.99)GAGELT(0.0)REELR K:TMT10,s:Phosphorylated S MCM7 81934.1 1 3 1064.1 181.73 HUMAN 1 14.3428 4.7515 NKSESVVYADIRKN_-p O95297;Y263-p NKSESVVYADIRKN_ 0.0675927151943729 0.00733410575919303 -0.460333333333333 -0.730333333333333 25.247743334999 30.5344003393357 -0.460333333333333 -0.730333333333333 0.00298693427554368 0.000884219251087528 -5.10679744520055 -6.58569391074114 O95297 MPZL1 O95297.Y263.p_MPZL1 O95297_Y263y _1_1_263_263 O95297 O95297|O95297-2|O95297-4|O95297-5 Myelin protein zero-like protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.15422.15790.2 19.52 9.3 5.595 3 1 1 0 724.3555 1367.7368 Y263y TMT10 258 (K) SESVVyADIR (K) S(0.0)ES(0.0)VVY(0.99)ADIR y:Phosphorylated Y MPZL1 29252.8 15 1 17.1 81.02 HUMAN 1 -25.2477 -30.5344 NKSNEDQSMGNWQIK-p P02545;S463-p NKSNEDQSMGNWQIK 0.0654149293186431 0.00868829757416166 -0.42 0.469 25.5779208593065 29.2262954651003 -0.42 0.469 0.00276826660773386 0.00119500701163612 -5.19165130821443 6.19065186763304 P02545 LMNA P02545.S463.p_LMNA P02545_S463s _1_1_463_463 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17869.17869.2 11.29 8.74 11.292 2 1 1 0 1037.9844 1995.0006 S463s TMT10 458 (K) SNEDQsMGNWQIK (R) S(0.0)NEDQS(0.99)MGNWQIK K:TMT10,s:Phosphorylated S LMNA 74423.5 1 28 60.1 706.83 HUMAN 1 -25.5779 29.2263 NKSTSDGSPVMAVMP-p Q9UPY3;S1255-p NKSTSDGSPVMAVMP 0.983318743723193 0.149237917300471 0.00333333333333332 -0.192333333333333 0.144548703068599 10.8730372016258 0.00333333333333332 -0.192333333333333 0.967264234650758 0.0817892601826921 0.0429729727447283 -2.13293222050482 Q9UPY3 DICER1 Q9UPY3.S1255.p_DICER1 Q9UPY3_S1255s _1_1_1255_1255 Q9UPY3 Q9UPY3|Q9UPY3-2|Q9UPY3-3 Endoribonuclease Dicer HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28227.28227.3 17.81 17.81 1.117 7 1 1 0 958.4865 2793.4778 S1255s TMT10 1250 (K) STSDGsPVMAVMPGTTDTIQVLK (G) S(0.0)T(0.0)S(0.0)DGS(0.99)PVMAVMPGT(0.0)T(0.0)DT(0.0)IQVLK K:TMT10,s:Phosphorylated S DICER1 221416.1 5 5 942.1 197.99 HUMAN 1 0.1445 -10.873 NKSYLEGSSDNQLKD-p Q9UHI6;S677-p NKSYLEGSSDNQLKD 0.486350322519858 0.182157822251302 -0.177666666666667 0.167 5.76683359341088 9.72858903193261 -0.177666666666667 0.167 0.265043184314109 0.106448880105405 -1.24291334259349 1.9338350644037 Q9UHI6 DDX20 Q9UHI6.S677.p_DDX20 Q9UHI6_S677sS678s_2_2_677_678 Q9UHI6 Q9UHI6|E9PJ60 Probable ATP-dependent RNA helicase DDX20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16879.16879.4 11.63 11.63 4.431 7 2 2 0 765.8444 2900.4162 S677s S678s TMT10 672 (K) SYLEGssDNQLKDSESTPVDDR (I) S(0.0)Y(0.0)LEGS(0.99)S(0.99)DNQLKDS(0.0)ES(0.0)T(0.0)PVDDR K:TMT10,s:Phosphorylated S DDX20 93037.6 6 14 610.1 261.86 HUMAN 1 -5.7668 9.7286 NKTDLDNSIGIKKMK-p Q9H501;S134-p NKTDLDNSIGIKKMK 0.178968928751419 0.0282775168270448 -0.428333333333333 -0.449 14.7566922170106 20.9819286342106 -0.428333333333333 -0.449 0.0334449675026058 0.00797640388920511 -2.8329419370161 -4.08885578542861 Q9H501 ESF1 Q9H501.S134.p_ESF1 Q9H501_S134s _1_1_134_134 Q9H501 Q9H501 ESF1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13746.13746.5 12.56 12.56 4.939 3 1 1 0 543.907 2635.5436 S134s TMT10 124 (K) GSENKTDLDNsIGIKK (M) GS(0.0)ENKT(0.0)DLDNS(0.99)IGIKK K:TMT10,s:Phosphorylated S ESF1 99193.8 4 2 500.1 291.39 HUMAN 1 -14.7567 -20.9819 NKTENGLTPKKKIQV-p P18850;T166-p NKTENGLTPKKKIQV 0.424226533641084 0.0010212605030329 -0.119666666666667 -1.16433333333333 6.86472741792313 51.6300933455479 -0.119666666666667 -1.16433333333333 0.205838807986259 6.87053672594102e-06 -1.43731306408316 -16.8376359618695 P18850 ATF6 P18850.T166.p_ATF6 P18850_T166t _1_1_166_166 P18850 P18850 Cyclic AMP-dependent transcription factor ATF-6 alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8478.8683.3 10.43 6.55 5.751 2 1 1 0 623.6865 1789.0787 T166t TMT10 159 (R) NKTENGLtPK (K) NKT(0.0)ENGLT(0.99)PK K:TMT10,t:Phosphorylated T ATF6 74868.6 6 1 4881.1 25.5 HUMAN 1 -6.8647 -51.6301 NKTGRNASIHTLLDA-p O00220;S424-p NKTGRNASIHTLLDA 0.152381872383781 0.107054874424175 -0.328 -0.179333333333333 16.441202030648 12.8205344126567 -0.328 -0.179333333333333 0.0226923669065211 0.0522331910503571 -3.15337075181302 -2.47744102455555 O00220 TNFRSF10A O00220.S424.p_TNFRSF10A O00220_S424s _1_1_424_424 O00220 O00220|F8U8C0 Tumor necrosis factor receptor superfamily member 10A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27792.27792.2 11.9 11.9 2.35 2 1 1 0 881.4629 1681.9435 S424s TMT10 422 (R) NAsIHTLLDALER (M) NAS(0.99)IHT(0.0)LLDALER s:Phosphorylated S TNFRSF10A 51286.3 2 1 6391.1 11.9 HUMAN 1 -16.4412 -12.8205 NKTKKAESSSDEEEE-p Q8WWQ0;S879-p NKTKKAESSSDEEEE 0.957246455101486 0.0483658645258237 0.0113333333333333 0.240666666666667 0.369616446619358 17.5923084524097 0.0113333333333333 0.240666666666667 0.918413703921253 0.0174088127797182 0.107304443984202 3.37753472129207 Q8WWQ0 PHIP Q8WWQ0.S879.p_PHIP Q8WWQ0_S879sS880sS881s_3_3_879_881 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9222.9222.2 8.49 8.49 6.381 4 3 3 0 1256.0277 2271.1443 S879s S880s S881s TMT10 876 (K) KAEsssDEEEESEK (Q) KAES(0.99)S(0.99)S(0.99)DEEEES(0.0)EK K:TMT10,s:Phosphorylated S PHIP 208454.1 7 31 108.1 577.05 HUMAN 1 0.3696 17.5923 NKTLKRISMLYMAKL-p A0MZ66-3;S101-p NKTLKRISMLYMAKL 0.80199546725685 0.927601724721068 -0.036 0.0156666666666667 1.84433258593736 0.460000366008814 -0.036 0.0156666666666667 0.653983424995127 0.899497505723401 -0.474045581766994 0.132327313860353 A0MZ66 SHTN1 A0MZ66.3.S101.p_SHTN1 A0MZ66-3_S101s _1_1_101_101 A0MZ66-3 A0MZ66-3|A0MZ66-6 Isoform 3 of Shootin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21088.21088.3 9.21 9.21 8.27 2 1 1 0 550.968 1570.9213 S101s TMT10 99 (K) RIsMLYMAK (L) RIS(0.99)MLY(0.0)MAK K:TMT10,s:Phosphorylated S SHTN1 74064.4 1 2 838.1 214.92 HUMAN 1 -1.8443 0.46 NKTRLSRTPGNRIVY-p P49207;T25-p NKTRLSRTPGNRIVY 0.0990820185181755 0.0234393081433852 0.486 -0.459 21.2290705036952 22.2342469144289 0.486 -0.459 0.0075351681748701 0.0059782670145831 4.14782861401701 -4.37101633356324 P49207 RPL34 P49207.T25.p_RPL34 P49207_T25t _1_1_25_25 P49207 P49207 60S ribosomal protein L34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3883.3883.3 11.64 11.64 2.588 2 1 1 0 403.8813 1129.6639 T25t TMT10 22 (R) LSRtPGNR (I) LS(0.0)RT(0.99)PGNR t:Phosphorylated T RPL34 13520.9 1 3 4190.1 35.62 HUMAN 1 21.2291 -22.2342 NKVIPAKSPPPPTHS-p Q14814;S251-p NKVIPAKSPPPPTHS 0.453752712679642 0.471343809333778 0.133 -0.108333333333333 6.33078055209701 4.35440177484044 0.133 -0.108333333333333 0.232767287030402 0.366910231536406 1.34328249784037 -0.984118375376675 Q14814 MEF2D Q14814.S251.p_MEF2D Q14814_S251s _1_1_251_251 Q14814 Q14814|Q14814-2|Q14814-4|Q14814-5|Q14814-3 Myocyte-specific enhancer factor 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13135.13135.5 20.5 17.21 4.65 5 1 1 0 703.8022 3435.0203 S251s TMT10 246 (K) VIPAKsPPPPTHSTQLGAPSRKPDLR (V) VIPAKS(0.99)PPPPT(0.0)HS(0.0)T(0.0)QLGAPS(0.0)RKPDLR K:TMT10,s:Phosphorylated S MEF2D 56165 3 8 1187.1 168.72 HUMAN 1 6.3308 -4.3544 NLAANDLSPSRIARL-p Q96CB9;S206-p NLAANDLSPSRIARL 0.317722808999546 0.379434330787539 -0.176666666666667 -0.0856666666666666 9.32581902328339 5.59281310898348 -0.176666666666667 -0.0856666666666666 0.116793345193149 0.275879029222568 -1.86477970364657 -1.21140056234076 Q96CB9 NSUN4 Q96CB9.S206.p_NSUN4 Q96CB9_S206s _1_1_206_206 Q96CB9 Q96CB9|Q96CB9-4 5-methylcytosine rRNA methyltransferase NSUN4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10680.10680.3 12.39 10.31 2.455 2 1 1 0 489.5792 1386.7539 S206s TMT10 199 (R) NLAANDLsPSR (I) NLAANDLS(0.99)PS(0.0)R s:Phosphorylated S NSUN4 43658.3 1 1 5747.1 16.6 HUMAN 1 -9.3258 -5.5928 NLAASRASPYPRVKV-p Q6IA69;S296-p NLAASRASPYPRVKV 0.110048145421068 0.909261012812205 0.320333333333333 0.0153333333333333 20.0596148832947 0.578000510051269 0.320333333333333 0.0153333333333333 0.00986366949221793 0.875386710134055 3.89175605782454 0.164379435760091 Q6IA69 NADSYN1 Q6IA69.S296.p_NADSYN1 Q6IA69_S296s _1_1_296_296 Q6IA69 Q6IA69|Q6IA69-2 Glutamine-dependent NAD(+) synthetase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7399.7399.3 8.63 8.63 1.438 3 1 1 0 537.9445 1531.8542 S296s TMT10 289 (R) NLAASRAsPYPR (V) NLAAS(0.0)RAS(0.99)PY(0.0)PR s:Phosphorylated S NADSYN1 80595.6 1 1 6933.1 8.63 HUMAN 1 20.0596 0.578 NLAATICSWEDDVNH-p Q9NQW6;S211-p NLAATICSWEDDVNH 0.369489108717469 0.118746821516269 -0.130666666666667 -0.309666666666667 8.0213013828357 12.2018125812747 -0.130666666666667 -0.309666666666667 0.157713860224965 0.0602308152915347 -1.63885564268911 -2.36697800949002 Q9NQW6 ANLN Q9NQW6.S211.p_ANLN Q9NQW6_S211s _1_1_211_211 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.36993.36993.4 22.77 22.77 1.351 3 1 1 0 725.8564 2820.4391 S211s TMT10 202 (R) LANLAATICsWEDDVNHSFAK (Q) LANLAAT(0.0)ICS(0.99)WEDDVNHS(0.0)FAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANLN 125566 2 16 68.1 675.08 HUMAN 1 -8.0213 -12.2018 NLALSRESLVV____-p Q86X29-6;S490-p NLALSRESLVV____ 0.898896426785364 0.282059783839552 0.02 -0.127666666666667 0.904694230874925 7.24648987728637 0.02 -0.127666666666667 0.811952413198564 0.188517213719389 0.249798104109795 -1.50366452024917 Q86X29 LSR Q86X29.6.S490.p_LSR Q86X29-6_S490s _1_1_490_490 Q86X29-6 S4R3V8|Q86X29-2|Q86X29-5|Q86X29-6|Q86X29-4|Q86X29-3 Isoform 6 of Lipolysis-stimulated lipoprotein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22074.22074.2 10.51 10.51 4.26 2 1 1 0 755.4161 1429.8576 S490s TMT10 483 (K) NLALSREsLVV (-) NLALS(0.0)RES(0.99)LVV s:Phosphorylated S LSR 54725.6 4 15 206.1 448.79 HUMAN 1 0.9047 -7.2465 NLAPHHASPDPPAPP-p Q9Y618;S2016-p NLAPHHASPDPPAPP 0.619956516878485 0.70988260065983 0.069 -0.0383333333333333 3.85940368672152 2.04752448119066 0.069 -0.0383333333333333 0.411206178388942 0.624090471469429 0.890157284368788 -0.519240325842324 Q9Y618 NCOR2 Q9Y618.S2016.p_NCOR2 Q9Y618_S2016s _1_1_2016_2016 Q9Y618 Q9Y618|Q9Y618-3|Q9Y618-2 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6121.6121.4 19.46 19.46 9.937 3 1 1 0 662.8198 2568.2905 S2016s TMT10 2009 (K) NLAPHHAsPDPPAPPASASDPHR (E) NLAPHHAS(0.99)PDPPAPPAS(0.0)AS(0.0)DPHR s:Phosphorylated S NCOR2 275540.8 3 31 16.1 1053.89 HUMAN 1 3.8594 -2.0475 NLAPVLQSPDGNWVA-p Q8NFW9;S350-p NLAPVLQSPDGNWVA 0.33286094806896 0.286209839550428 -0.212666666666667 -0.112666666666667 8.91880636917552 7.1684777790473 -0.212666666666667 -0.112666666666667 0.128268307151682 0.191934136023788 -1.79430779873588 -1.49005168124562 Q8NFW9 MYRIP Q8NFW9.S350.p_MYRIP Q8NFW9_S350s _1_1_350_350 Q8NFW9 Q8NFW9|Q8NFW9-2|Q8NFW9-6|Q8NFW9-3|Q8NFW9-4|Q8NFW9-5 Rab effector MyRIP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28659.28659.3 13.51 13.51 6.586 3 1 1 0 1092.574 3195.7414 S350s TMT10 335 (K) SVDRLDETNLAPVLQsPDGNWVALK (D) S(0.0)VDRLDET(0.0)NLAPVLQS(0.99)PDGNWVALK K:TMT10,s:Phosphorylated S MYRIP 96845.6 1 5 2094.1 97.91 HUMAN 1 -8.9188 -7.1685 NLATAANYWAKRRNS-p P0CF75;Y307-p NLATAANYWAKRRNS 0.922345826324192 0.0450881171308284 -0.0143333333333333 0.313333333333333 0.688457255617707 18.0117027556342 -0.0143333333333333 0.313333333333333 0.853403214621631 0.0158062819458812 -0.19379548927114 3.46179768007415 P0CF75 EBLN1 P0CF75.Y307.p_EBLN1 P0CF75_T303tY307y_2_2_303_307 P0CF75 P0CF75 Endogenous Bornavirus-like nucleoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28540.28540.4 7.3 0.58 1.327 3 2 2 0 811.8987 3083.6905 N300n T303t Y307y TMT10 287 (R) HPVIGVLSPQMFPnLAtAANyWAK (R) HPVIGVLS(0.0)PQMFPN(0.99)LAT(0.99)AAN(0.0)Y(0.99)WAK K:TMT10,n:Deamidated,t:Phosphorylated T,y:Phosphorylated Y EBLN1 40655 1 1 7206.1 7.3 HUMAN 1 -0.6885 18.0117 NLATGIPSSKVKYSR-p Q96A57-2;S77-p NLATGIPSSKVKYSR 0.191231796239439 0.143619020527746 -0.245666666666667 -0.260666666666667 14.0287342221102 11.1024904440983 -0.245666666666667 -0.260666666666667 0.0395481868887322 0.0775802108473156 -2.69819566828352 -2.17308432557462 Q96A57 TMEM230 Q96A57.2.S77.p_TMEM230 Q96A57-2_S77s _1_1_77_77 Q96A57-2 Q96A57-2|A0A087WTT2 Isoform 1 of Transmembrane protein 230 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16078.16078.3 11.81 11.81 1.138 4 1 1 0 542.9672 1546.9205 S77s TMT10 69 (R) TNLATGIPsSK (V) T(0.0)NLAT(0.0)GIPS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S TMEM230 20081 3 1 3064.1 61.67 HUMAN 1 -14.0287 -11.1025 NLATSADTPPSTVPG-p Q96Q15;T3573-p NLATSADTPPSTVPG 0.711082879092597 0.895455304985121 -0.0536666666666667 -0.0136666666666666 2.78509260390257 0.672850666456187 -0.0536666666666667 -0.0136666666666666 0.526611985912874 0.856475478566442 -0.676413622460483 -0.189657505555531 Q96Q15 SMG1 Q96Q15.T3573.p_SMG1 Q96Q15_T3573t _1_1_3573_3573 Q96Q15 Q96Q15-2|Q96Q15-3|Q96Q15-4 Serine/threonine-protein kinase SMG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15138.15138.2 18.23 15.55 2.332 6 1 1 0 1126.5824 2172.1912 T3573t TMT10 3566 (K) NLATSADtPPSTVPGTGK (S) NLAT(0.0)S(0.0)ADT(0.99)PPS(0.0)T(0.0)VPGT(0.0)GK K:TMT10,t:Phosphorylated T SMG1 414601.1 3 8 1337.1 152.31 HUMAN 1 -2.7851 -0.6729 NLCDAPDSPRPVKAS-p Q9UKA4;S433-p NLCDAPDSPRPVKAS 0.0190481655214142 0.000993050805672115 -0.868333333333333 -1.60166666666667 40.4023891870108 52.6082032388191 -0.868333333333334 -1.60166666666667 9.11509252231454e-05 5.48503844749719e-06 -10.338051432389 -17.5633028656 Q9UKA4 AKAP11 Q9UKA4.S433.p_AKAP11 Q9UKA4_S433s _1_1_433_433 Q9UKA4 Q9UKA4 A-kinase anchor protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13579.13579.5 22.25 22.25 12.471 3 1 1 0 599.7148 2914.57 S433s TMT10 419 (R) KPESPYGNLCDAPDsPRPVK (A) KPES(0.0)PY(0.0)GNLCDAPDS(0.99)PRPVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S AKAP11 213075.9 2 5 688.1 243.29 HUMAN 1 -40.4024 -52.6082 NLDDFAESDEDEAHG-p Q8N3D4;S191-p NLDDFAESDEDEAHG 0.833124060837715 0.77402984273204 0.0316666666666667 0.0296666666666667 1.52856178152671 1.53840363847919 0.0316666666666667 0.0296666666666667 0.703305189305383 0.701713183822663 0.401668436854863 0.403921854177617 Q8N3D4 EHBP1L1 Q8N3D4.S191.p_EHBP1L1 Q8N3D4_S191s_1_1_191_191 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.26467.26467.4 25.36 25.36 1.831 6 1 1 0 1261.8167 4948.2777 M168m S191s TMT10 163 (R) ATDDDmQSLASLMSVKPSDVGNLDDFAEsDEDEAHGPGAPEAR (A) AT(0.0)DDDM(0.99)QS(0.0)LAS(0.0)LM(0.0)S(0.0)VKPS(0.0)DVGNLDDFAES(0.99)DEDEAHGPGAPEAR K:TMT10,m:Oxidized methionine,s:Phosphorylated S EHBP1L1 162650.3 8 1 593.1 264.13 HUMAN 1 1.5286 1.5384 NLDIERPTYTNLNRL-p P68363;T223-p NLDIERPTYTNLNRL 0.635993227924701 0.0374218995289573 0.0686666666666667 0.39 3.66494265105095 19.1713296002144 0.0686666666666667 0.39 0.430036912266393 0.0121022756352544 0.852515566568618 3.70004173865088 P68363 TUBA1B P68363.T223.p_TUBA1B P68363_T223t _1_1_223_223 P68363 F5H5D3|Q71U36|P68363|Q13748|Q6PEY2|Q9BQE3|Q9NY65|P68366|P68366-2|Q13748-2|Q71U36-2|Q9NY65-2 Tubulin alpha-1B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15419.15419.3 10.67 10.67 1.304 3 1 1 0 676.6747 1948.045 T223t TMT10 216 (R) NLDIERPtYTNLNR (L) NLDIERPT(0.99)Y(0.0)T(0.0)NLNR t:Phosphorylated T TUBA1B 50835.4 1 7 868.1 210.03 HUMAN 1 3.6649 19.1713 NLDSESESGSSIAEK-p Q15648;S1467-p NLDSESESGSSIAEK 0.407634516992027 0.0461741357430241 0.110333333333333 0.293666666666667 7.19636753308778 17.873142004615 0.110333333333333 0.293666666666667 0.19070551242266 0.0163187090569216 1.4953444288705 3.433850799167 Q15648 MED1 Q15648.S1467.p_MED1 Q15648_S1463sS1465sS1467s_3_3_1463_1467 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20792.20792.3 15.06 15.06 1.105 8 3 3 0 999.0964 2755.3674 S1463s S1465s S1467s TMT10 1453 (K) SPAYTPQNLDsEsEsGSSIAEK (S) S(0.0)PAY(0.0)T(0.0)PQNLDS(0.99)ES(0.99)ES(0.99)GS(0.0)S(0.0)IAEK K:TMT10,s:Phosphorylated S MED1 169445 1 41 115.1 566.87 HUMAN 1 7.1964 17.8731 NLDSPMVSPPPDYPG-p A3KN83;S1062-p NLDSPMVSPPPDYPG 0.657565461800159 0.817606671315592 -0.114 -0.0493333333333333 3.41419905249688 1.22288474479565 -0.114 -0.0493333333333333 0.455596201737741 0.754590833982517 -0.803355255273843 -0.328855274292181 A3KN83 SBNO1 A3KN83.S1062.p_SBNO1 A3KN83_S1062s _1_1_1062_1062 A3KN83 A3KN83|A3KN83-2 Protein strawberry notch homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.33983.33983.3 10.53 10.53 2.62 4 1 1 0 992.1641 2894.505 S1062s TMT10 1052 (K) SIVNLDSPMVsPPPDYPGEFFK (D) S(0.0)IVNLDS(0.0)PMVS(0.99)PPPDY(0.0)PGEFFK K:TMT10,s:Phosphorylated S SBNO1 154994.1 1 8 861.1 210.54 HUMAN 1 -3.4142 -1.2229 NLEDDTLSECKQVSD-p Q14966;S650-p NLEDDTLSECKQVSD 0.911440343553457 0.0511303546508392 -0.0463333333333333 0.430333333333333 0.789549518723475 17.2423120787885 -0.0463333333333334 0.430333333333333 0.833767664475666 0.0188698649566624 -0.22022280792039 3.30794797985641 Q14966 ZNF638 Q14966.S650.p_ZNF638 Q14966_S650s _1_1_650_650 Q14966 Q14966 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14584.14584.3 8.3 8.3 1.684 2 1 1 0 621.2933 1781.8992 S650s TMT10 643 (K) NLEDDTLsECK (Q) NLEDDT(0.0)LS(0.99)ECK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF638 222047.2 1 12 165.1 494.68 HUMAN 1 -0.7895 17.2423 NLEGCALSQGSLRTG-p Q9NZT2;S420-p NLEGCALSQGSLRTG 0.731262540645938 0.365202551017704 0.055 0.087 2.57989495558898 5.79929916977431 0.055 0.087 0.552090792743261 0.263069247807459 0.633711666332311 1.24843889228896 Q9NZT2 OGFR Q9NZT2.S420.p_OGFR Q9NZT2_S420s _1_1_420_420 Q9NZT2 Q9NZT2|Q9NZT2-2|A0A0A0MRN5 Opioid growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25970.25970.3 22.8 22.8 3.604 2 1 1 0 671.0136 1931.0582 S420s TMT10 410 (K) IALNLEGCALsQGSLR (T) IALNLEGCALS(0.99)QGS(0.0)LR C:Carbamidomethylation,s:Phosphorylated S OGFR 73893.9 2 5 620.1 259.74 HUMAN 1 2.5799 5.7993 NLEKQNHTPRKHHQH-p Q15233;T15-p NLEKQNHTPRKHHQH 0.391280754824949 0.00197175202794993 0.272333333333333 -1.30166666666667 7.51313429899828 42.2554539467388 0.272333333333333 -1.30166666666667 0.1772909512021 5.94914570004453e-05 1.55056883979447 -11.1938664584179 Q15233 NONO Q15233.T15.p_NONO Q15233_T15t_1_1_15_15 Q15233 Q15233 Non-POU domain-containing octamer-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10218.10218.5 14.8 14.8 7.49 2 1 1 0 477.0653 2300.3442 N13n T15t TMT10 6 (K) TFNLEKQnHtPRK (H) T(0.0)FN(0.0)LEKQN(0.99)HT(0.99)PRK K:TMT10,n:Deamidated,t:Phosphorylated T NONO 54344.7 8 2 2102.1 97.61 HUMAN 1 7.5131 -42.2555 NLENLDVSAFQAPED-p Q92547;S350-p NLENLDVSAFQAPED 0.689199622098369 0.095306879869011 -0.0666666666666667 -0.268333333333333 3.03395791539984 13.5024573407285 -0.0666666666666667 -0.268333333333333 0.497283682056663 0.0446430919517807 -0.727301133728157 -2.60052026404158 Q92547 TOPBP1 Q92547.S350.p_TOPBP1 Q92547_S350s _1_1_350_350 Q92547 Q92547 DNA topoisomerase 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.36888.36888.4 26.2 26.2 12.696 2 1 1 0 842.6542 3287.6303 S350s TMT10 337 (K) LEPTLENLENLDVsAFQAPEDLLDGCR (I) LEPT(0.0)LENLENLDVS(0.99)AFQAPEDLLDGCR C:Carbamidomethylation,s:Phosphorylated S TOPBP1 172786.5 2 4 1135.1 173.67 HUMAN 1 -3.034 -13.5025 NLESHLMSPAEIPGQ-p Q9NRA8;S513-p NLESHLMSPAEIPGQ 0.492840739481026 0.00915914345677055 -0.105333333333333 -0.433666666666667 5.66064142706763 28.827013039896 -0.105333333333333 -0.433666666666667 0.271603809657403 0.00131008265266638 -1.22386509326552 -6.07389229966251 Q9NRA8 EIF4ENIF1 Q9NRA8.S513.p_EIF4ENIF1 Q9NRA8_S513s _1_1_513_513 Q9NRA8 Q9NRA8-3|Q9NRA8-2 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22398.22398.4 17.93 14.84 6.484 2 1 1 0 646.3426 2502.3791 S513s TMT10 506 (R) NLESHLMsPAEIPGQPVPK (N) NLES(0.0)HLMS(0.99)PAEIPGQPVPK K:TMT10,s:Phosphorylated S EIF4ENIF1 108541.3 4 13 150.1 511.59 HUMAN 1 -5.6606 -28.827 NLESKENTPPVVISA-p Q5UIP0;T1388-p NLESKENTPPVVISA 0.383970394757305 0.023345939998049 0.154333333333333 0.352666666666667 7.69713846383463 22.2654757300247 0.154333333333333 0.352666666666667 0.169936298212329 0.00593543327368072 1.58257395372927 4.37820026713601 Q5UIP0 RIF1 Q5UIP0.T1388.p_RIF1 Q5UIP0_T1388t _1_1_1388_1388 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27320.27320.4 25.83 21.1 3.323 5 1 1 0 1194.6166 4695.4754 T1388t TMT10 1377 (K) NVEINLESKENtPPVVISADQMVNEDSQVQITPNQK (T) NVEINLES(0.0)KENT(0.99)PPVVIS(0.0)ADQMVNEDS(0.0)QVQIT(0.0)PNQK K:TMT10,t:Phosphorylated T RIF1 276628.8 7 12 29.1 922.06 HUMAN 1 7.6971 22.2655 NLFRFGESTTGFNFS-p P49792;S2263-p NLFRFGESTTGFNFS 0.0949352610946194 0.00816768591511242 -0.722 -0.861333333333333 21.6895481686347 29.7247443522172 -0.722 -0.861333333333334 0.00677712011756603 0.00106543157853399 -4.25129565869115 -6.33888526631411 P49792 RANBP2 P49792.S2263.p_RANBP2 P49792_S2263s _1_1_2263_2263 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29870.29870.2 13.14 13.14 1.11 4 1 1 0 1003.9863 1927.0002 S2263s TMT10 2260 (R) FGEsTTGFNFSFK (S) FGES(0.99)T(0.0)T(0.0)GFNFS(0.0)FK K:TMT10,s:Phosphorylated S RANBP2 362585.9 3 43 9.1 1298.62 HUMAN 1 -21.6895 -29.7247 NLGEVPLTPTEEASL-p Q6ZNJ1;T1867-p NLGEVPLTPTEEASL 0.0690182417121105 0.0392872253413521 -0.447 -0.489333333333333 25.0329751649183 18.8690730609848 -0.447 -0.489333333333333 0.00313835800304647 0.0129745616476302 -5.05213322357391 -3.63717418378636 Q6ZNJ1 NBEAL2 Q6ZNJ1.T1867.p_NBEAL2 Q6ZNJ1_T1867t _1_1_1867_1867 Q6ZNJ1 Q6ZNJ1|Q6ZNJ1-3|Q6ZNJ1-2 Neurobeachin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30609.30609.3 13.35 6.33 1.193 4 1 1 0 944.8389 2752.5384 T1867t TMT10 1859 (R) DNLGEVPLtPTEEASLPLAVTK (E) DNLGEVPLT(0.99)PT(0.0)EEAS(0.0)LPLAVT(0.0)K K:TMT10,t:Phosphorylated T NBEAL2 305591.9 3 5 1347.1 151.04 HUMAN 1 -25.033 -18.8691 NLGFGDESPEPEASG-p Q9P227;S517-p NLGFGDESPEPEASG 0.465203752033176 0.229859916425004 0.125666666666667 0.171666666666667 6.13296956105271 8.41245664684072 0.125666666666667 0.171666666666667 0.243614449426055 0.144129982969559 1.30821658716464 1.70607592443375 Q9P227 ARHGAP23 Q9P227.S517.p_ARHGAP23 Q9P227_S517s _1_1_517_517 Q9P227 Q9P227|Q9P227-2 Rho GTPase-activating protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18737.18737.3 13.01 13.01 13.011 2 1 1 0 743.9935 2150.0022 S517s TMT10 508 (R) QMNLGFGDEsPEPEASGR (G) QMNLGFGDES(0.99)PEPEAS(0.0)GR s:Phosphorylated S ARHGAP23 163444.2 1 36 148.2 512.52 HUMAN 1 6.133 8.4125 NLGMLVWSPNQNLSE-p Q9UKL0;S139-p NLGMLVWSPNQNLSE 0.558156187420407 0.997054008332604 0.103666666666667 0.001 4.67728811901004 0.0182386791091146 0.103666666666667 0.000999999999999973 0.340620818416961 0.995809194971666 1.04457309028984 0.00549888978221275 Q9UKL0 RCOR1 Q9UKL0.S139.p_RCOR1 Q9UKL0_S139s _1_1_139_139 Q9UKL0 Q9UKL0 REST corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.36359.36359.4 11.99 10.42 4.962 3 1 1 0 950.7541 3720.0285 S139s TMT10 131 (R) DNLGMLVWsPNQNLSEAKLDEYIAIAK (E) DNLGMLVWS(0.99)PNQNLS(0.0)EAKLDEY(0.0)IAIAK K:TMT10,s:Phosphorylated S RCOR1 53440.6 2 4 318.1 366.35 HUMAN 1 4.6773 0.0182 NLGPSRRSPGTPRPP-p Q9Y3X0;S80-p NLGPSRRSPGTPRPP 0.404577762556746 0.81051044960727 0.117333333333333 -0.044 7.25880880739071 1.27919006547875 0.117333333333333 -0.044 0.187983235071679 0.744870875137432 1.50624460143433 -0.342479900460669 Q9Y3X0 CCDC9 Q9Y3X0.S80.p_CCDC9 Q9Y3X0_S80s _1_1_80_80 Q9Y3X0 Q9Y3X0 Coiled-coil domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5025.5025.2 13.18 8.69 10.962 3 1 1 0 730.876 1380.7797 S80s Hydrogen 80 (R) sPGTPRPPGASK (G) S(0.99)PGT(0.0)PRPPGAS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S CCDC9 59816.1 11 1 2003.1 103.17 HUMAN 1 7.2588 -1.2792 NLHAVVQTPGGKKRS-p Q66GS9;T156-p NLHAVVQTPGGKKRS 0.334197986028367 0.991961304482554 0.150666666666667 0.00166666666666671 8.88494107247827 0.0513496163214365 0.150666666666667 0.00166666666666666 0.129272424109847 0.988245938990713 1.78844572364987 0.0154235128816548 Q66GS9 CEP135 Q66GS9.T156.p_CEP135 Q66GS9_T156t _1_1_156_156 Q66GS9 Q66GS9|Q66GS9-2 Centrosomal protein of 135 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11793.11793.3 15.14 15.14 99 1 1 1 0 586.9963 1679.0005 T156t TMT10 149 (K) NLHAVVQtPGGK (K) NLHAVVQT(1.0)PGGK K:TMT10,t:Phosphorylated T CEP135 133944.3 1 1 2135.1 96.32 HUMAN 1 8.8849 0.0513 NLHGAMYT_______-p Q9P0P0;T153-p NLHGAMYT_______ 0.787850664910505 0.184070145532339 0.0423333333333333 -0.146666666666667 1.99847598620081 9.66408133737175 0.0423333333333333 -0.146666666666667 0.63117879708397 0.108041813743888 0.508464510135268 -1.92265609954266 Q9P0P0 RNF181 Q9P0P0.T153.p_RNF181 Q9P0P0_T153t _1_1_153_153 Q9P0P0 Q9P0P0 E3 ubiquitin-protein ligase RNF181 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16673.16673.2 14.31 14.31 1.732 2 1 1 0 729.3365 1377.7034 T153t TMT10 144 (R) LENLHGAMYt (-) LENLHGAMY(0.0)T(0.99) t:Phosphorylated T RNF181 18308.2 1 3 3520.1 49.15 HUMAN 1 1.9985 -9.6641 NLHWGEKSPPYGVPT-p Q96AG3;S61-p NLHWGEKSPPYGVPT 0.608160320847322 0.0041902045604516 0.133 0.558666666666667 3.99960291281439 34.9795209959122 0.133 0.558666666666667 0.398143572232478 0.000317722448255975 0.917053707707896 8.08667741112543 Q96AG3 SLC25A46 Q96AG3.S61.p_SLC25A46 Q96AG3_S61s _1_1_61_61 Q96AG3 Q96AG3|Q96AG3-3 Solute carrier family 25 member 46 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.20732.20732.5 23.18 20.85 3.248 13 1 1 0 1075.1147 5291.5558 S61s TMT10 54 (R) NLHWGEKsPPYGVPTTSTPYEGPTEEPFSSGGGGSVQGQSSEQLNR (F) NLHWGEKS(0.99)PPY(0.0)GVPT(0.0)T(0.0)S(0.0)T(0.0)PY(0.0)EGPT(0.0)EEPFS(0.0)S(0.0)GGGGS(0.0)VQGQS(0.0)S(0.0)EQLNR K:TMT10,s:Phosphorylated S SLC25A46 46458.4 3 3 3427.1 51.39 HUMAN 1 3.9996 34.9795 NLHYAVVSKRKILQL-p P47897;S495-p NLHYAVVSKRKILQL 0.256598632633919 0.745334080697118 -0.234333333333333 0.0333333333333333 11.2235797581761 1.76197115115946 -0.234333333333333 0.0333333333333333 0.0754470084402259 0.666504191410962 -2.19532584592299 0.455368250607002 P47897 QARS P47897.S495.p_QARS P47897_S495s _1_1_495_495 P47897 P47897|P47897-2|B4DDN1 Glutamine--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18588.18588.3 14.48 14.48 4.791 2 1 1 0 561.319 1601.9779 S495s TMT10 487 (R) LNLHYAVVsK (R) LNLHY(0.0)AVVS(0.99)K K:TMT10,s:Phosphorylated S QARS 88710 1 5 2312.1 88.39 HUMAN 1 -11.2236 1.762 NLINEELSLKDELEK-p P29374;S716-p NLINEELSLKDELEK 0.217902665488482 0.00273501716752327 -0.501666666666667 0.881666666666667 12.750004731414 38.8916258614284 -0.501666666666667 0.881666666666667 0.0530883865860129 0.000129073597235482 -2.46611518919364 9.64383507496997 P29374 ARID4A P29374.S716.p_ARID4A P29374_S716s _1_1_716_716 P29374 P29374|P29374-2|P29374-3 AT-rich interactive domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27195.27195.4 18.33 17.69 99 1 1 1 0 639.3564 2474.4321 S716s TMT10 709 (K) NLINEELsLKDELEK (N) NLINEELS(1.0)LKDELEK K:TMT10,s:Phosphorylated S ARID4A 143719.1 3 3 532.1 280.77 HUMAN 1 -12.75 38.8916 NLIQHNNSTQTDIFY-p Q8TDM6;S841-p NLIQHNNSTQTDIFY 0.184847781389892 0.920295532710217 0.253666666666667 -0.012 14.4207023819495 0.508522377033067 0.253666666666667 -0.012 0.0361351416758252 0.889503706905775 2.77049294194449 -0.145591076942043 Q8TDM6 DLG5 Q8TDM6.S841.p_DLG5 Q8TDM6_S841s _1_1_841_841 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14515.14515.4 20 16.56 1.283 5 1 1 0 790.3859 3078.5554 S841s TMT10 833 (K) RNLIQHNNsTQTDIFYTDRLEDR (K) RNLIQHNNS(0.99)T(0.0)QT(0.0)DIFY(0.0)T(0.0)DRLEDR s:Phosphorylated S DLG5 215575.4 5 15 34.1 890.58 HUMAN 1 14.4207 -0.5085 NLIRVNATKAYEMAL-p F5H0U5;T110-p NLIRVNATKAYEMAL 0.590748705738669 0.0244781750503597 -0.0806666666666667 0.318 4.21246437718183 21.9399701745588 -0.0806666666666667 0.318 0.379099806087789 0.00639739228916139 -0.957530675051478 4.30368050078612 F5H0U5 NotFound F5H0U5.T110.p_NotFound F5H0U5_S91sT110t_2_2_91_110 F5H0U5 F5H0U5 Glycolipid transfer protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12040.12040.3 9.18 0.92 99 2 2 2 0 1500.7489 4340.3338 S91s T110t TMT10 79 (K) EIGLRFIQVFLQsICDGERDENHPNLIRVNAtK (A) EIGLRFIQVFLQS(1.0)ICDGERDENHPNLIRVNAT(1.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T GLTP 21829.9 1 1 6835.1 9.18 HUMAN 1 -4.2125 21.94 NLKDLCPSEGESDAE-p O15119;S371-p NLKDLCPSEGESDAE 0.296077692655468 0.888836384256751 0.155 -0.0146666666666667 9.95358576000643 0.719077411726429 0.155 -0.0146666666666667 0.101074458661179 0.847407412998373 1.97364782257168 -0.201828118552092 O15119 TBX3 O15119.S371.p_TBX3 O15119_S371sS375s_2_2_371_375 O15119 O15119|O15119-2 T-box transcription factor TBX3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13227.13227.4 14.46 14.46 4.019 3 2 2 0 967.1645 3705.7099 S371s S375s TMT10 367 (K) DLCPsEGEsDAEAESKEEHGPEACDAAK (I) DLCPS(0.99)EGES(0.99)DAEAES(0.0)KEEHGPEACDAAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TBX3 79786.8 1 9 1589.1 129.37 HUMAN 1 9.9536 -0.7191 NLKEEPQSSEEESMS-p Q3L8U1;S2058-p NLKEEPQSSEEESMS 0.428733505282635 0.0115841932008813 -0.118333333333333 -0.451333333333333 6.77346612936051 27.0845085403254 -0.118333333333333 -0.451333333333333 0.210210007188136 0.00195681219369834 -1.42129843384268 -5.58410175906954 Q3L8U1 CHD9 Q3L8U1.S2058.p_CHD9 Q3L8U1_S2058sS2059s_2_2_2058_2059 Q3L8U1 Q3L8U1 Chromodomain-helicase-DNA-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13484.13484.4 11.1 11.1 2.375 7 2 2 0 897.4275 3426.7513 S2058s S2059s TMT10 2047 (K) VKSENLKEEPQssEEESMSSVETR (T) VKS(0.0)ENLKEEPQS(0.99)S(0.99)EEES(0.0)MS(0.0)S(0.0)VET(0.0)R K:TMT10,s:Phosphorylated S CHD9 328184.1 1 9 1062.1 182 HUMAN 1 -6.7735 -27.0845 NLKGPRISAPNVDFN-p Q09666;S5448-p NLKGPRISAPNVDFN 0.138650428219969 0.208335056696107 -0.267 -0.138666666666667 17.5715073465723 8.96313622051318 -0.267 -0.138666666666667 0.0174923945831473 0.126965690218394 -3.37605984961437 -1.80133635422225 Q09666 AHNAK Q09666.S5448.p_AHNAK Q09666_S5448s _1_1_5448_5448 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26356.26590.3 18.3 18.3 99 1 1 1 0 680.3581 1959.0951 S5448s TMT10 5447 (R) IsAPNVDFNLEGPK (V) IS(1.0)APNVDFNLEGPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 46 140 1.1 4313.36 HUMAN 1 -17.5715 -8.9631 NLKMSVNSDQTLTTE-p Q8NEV8;S1320-p NLKMSVNSDQTLTTE 0.580949089819777 0.750398487151971 0.0803333333333333 0.0313333333333333 4.33916487484988 1.72339207208744 0.0803333333333334 0.0313333333333333 0.368199769689458 0.672451230756311 0.981431071576689 0.446585546456967 Q8NEV8 EXPH5 Q8NEV8.S1320.p_EXPH5 Q8NEV8_S1320s _1_1_1320_1320 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21440.21440.3 16.5 16.5 1.135 6 1 1 0 785.6918 2275.0896 S1320s TMT10 1316 (K) MSVNsDQTLTTENMTAFR (L) MS(0.0)VNS(0.99)DQT(0.0)LT(0.0)T(0.0)ENMT(0.0)AFR s:Phosphorylated S EXPH5 223884.5 1 20 129.1 537.25 HUMAN 1 4.3392 1.7234 NLKSPLGSKSSSMEL-p Q5VZ89-7;S1297-p NLKSPLGSKSSSMEL 0.621867421925022 0.00608177143526352 -0.13 0.746333333333333 3.83472176487582 31.9789787272445 -0.13 0.746333333333334 0.413549807982963 0.000634018787520709 -0.885401710367164 7.04542325116309 Q5VZ89 DENND4C Q5VZ89.7.S1297.p_DENND4C Q5VZ89-7_S1293sS1297s_2_2_1293_1297 Q5VZ89-7 Q5VZ89-7|Q5VZ89-3|Q5VZ89-5 Isoform 2 of DENN domain-containing protein 4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.35200.35200.3 11.24 11.24 1.36 4 2 2 0 986.1624 2796.542 S1293s S1297s TMT10 1280 (R) NLADEIESYMNLKsPLGsK (S) NLADEIES(0.0)Y(0.0)MNLKS(0.99)PLGS(0.99)K K:TMT10,s:Phosphorylated S DENND4C 220154.2 3 34 116.1 565.52 HUMAN 1 -3.8347 31.979 NLKTPVPSDIDISRS-p F5H2F4;S374-p NLKTPVPSDIDISRS 0.282067524168147 0.327808289917345 0.170333333333333 -0.116666666666667 10.3915362430971 6.41360311547049 0.170333333333333 -0.116666666666667 0.0913789946592867 0.22837033472955 2.04982343261111 -1.35758024562479 F5H2F4 NotFound F5H2F4.S374.p_NotFound F5H2F4_S374s _1_1_374_374 F5H2F4 F5H2F4|P11586 C-1-tetrahydrofolate synthase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17416.17416.2 10.91 9.08 3.572 3 1 1 0 754.8819 1428.7896 S374s TMT10 370 (K) TPVPsDIDISR (S) T(0.0)PVPS(0.99)DIDIS(0.0)R s:Phosphorylated S MTHFD1 111409.8 1 4 1887.1 109.02 HUMAN 1 10.3915 -6.4136 NLLHFPSSQGEEEKE-p Q12888-2;S1073-p NLLHFPSSQGEEEKE 0.255122222613923 0.00508122719502233 -0.202666666666667 0.586 11.2844753235766 33.4071564327667 -0.202666666666667 0.586 0.0743964936783609 0.00045633560642799 -2.2060240250202 7.52583027445907 Q12888 TP53BP1 Q12888.2.S1073.p_TP53BP1 Q12888-2_S1072sS1073s_2_2_1072_1073 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21159.21159.3 12.56 12.56 99 2 2 2 0 764.0235 2130.1232 S1072s S1073s TMT10 1065 (R) GNLLHFPssQGEEEK (E) GNLLHFPS(1.0)S(1.0)QGEEEK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 1 100 3.1 2297.07 HUMAN 1 -11.2845 33.4072 NLLKEEQTPQNKITV-p P00338;T18-p NLLKEEQTPQNKITV 0.340538234007368 0.36405635250794 -0.33 0.150666666666667 8.70215243203388 5.81696742375058 -0.33 0.150666666666667 0.13482944809338 0.262001186229964 -1.75680497279381 1.25159907858684 P00338 LDHA P00338.T18.p_LDHA P00338_T18t _1_1_18_18 P00338 P00338-3|F5GWW2|F5GXC7|F5H8H6 L-lactate dehydrogenase A chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27006.27006.4 18.29 18.29 12.712 2 1 1 0 711.1432 2761.5703 T18t TMT10 6 (K) DQLIYNLLKEEQtPQNK (I) DQLIY(0.0)NLLKEEQT(0.99)PQNK K:TMT10,t:Phosphorylated T LDHA 36973.3 1 2 4227.1 35.1 HUMAN 1 -8.7022 5.817 NLLKKRASFYENIIK-p Q9H7D0;S1347-p NLLKKRASFYENIIK 0.131896337928271 0.063344122419986 -0.437666666666667 -0.291 18.1719658583384 15.9544818697566 -0.437666666666667 -0.291 0.0152336303888103 0.0253835180316303 -3.49715180692791 -3.05730253187614 Q9H7D0 DOCK5 Q9H7D0.S1347.p_DOCK5 Q9H7D0_S1347s _1_1_1347_1347 Q9H7D0 Q9H7D0 Dedicator of cytokinesis protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19614.19614.3 10.81 6.39 6.236 2 1 1 0 593.6582 1698.9943 S1347s TMT10 1345 (K) RAsFYENIIK (A) RAS(0.99)FY(0.0)ENIIK K:TMT10,s:Phosphorylated S DOCK5 216331.8 2 2 828.1 217.17 HUMAN 1 -18.172 -15.9545 NLLKSHASGTYLIRE-p P52735-3;S682-p NLLKSHASGTYLIRE 0.374297731091176 0.0276264135019995 -0.129666666666667 -0.356 7.90199126995369 21.1335944660395 -0.129666666666667 -0.356 0.162106665676736 0.0077026568984808 -1.61815400032527 -4.12242684387855 P52735 VAV2 P52735.3.S682.p_VAV2 P52735-3_S682s _1_1_682_682 P52735-3 P52735|P52735-2|P52735-3 Isoform 3 of Guanine nucleotide exchange factor VAV2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8684.8684.3 10.29 10.29 2.877 4 1 1 0 471.9081 1333.7426 S682s TMT10 679 (K) SHAsGTYLIR (E) S(0.0)HAS(0.99)GT(0.0)Y(0.0)LIR s:Phosphorylated S VAV2 98228.6 1 4 2598.1 77.13 HUMAN 1 -7.902 -21.1336 NLLTKQGSEDNLQGT-p Q96RR4-3;S522-p NLLTKQGSEDNLQGT 0.274188432612354 0.96200670695506 0.298 -0.00833333333333331 10.6416154832037 0.240387425673651 0.298 -0.00833333333333329 0.0862657597778799 0.946152753151148 2.09343552708679 -0.0707240305937282 Q96RR4 CAMKK2 Q96RR4.3.S522.p_CAMKK2 Q96RR4-3_S522s _1_1_522_522 Q96RR4-3 Q96RR4-3|Q96RR4-5 Isoform 3 of Calcium/calmodulin-dependent protein kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32444.32444.4 21.28 21.28 3.22 5 1 1 0 986.5046 3863.0326 S522s TMT10 509 (R) SLSAPGNLLTKQGsEDNLQGTDPPPVGEEEVLL (-) S(0.0)LS(0.0)APGNLLT(0.0)KQGS(0.99)EDNLQGT(0.0)DPPPVGEEEVLL K:TMT10,s:Phosphorylated S CAMKK2 60285.4 9 13 1793.1 114.32 HUMAN 1 10.6416 -0.2404 NLLVKQQTPPSQQQP-p Q8NDV7;T1470-p NLLVKQQTPPSQQQP 0.592036231647899 0.0230671467143122 -0.131333333333333 -0.380666666666667 4.19507324033311 22.3483941355912 -0.131333333333333 -0.380666666666667 0.380620938675671 0.00582318498352065 -0.954239152918457 -4.39731084971565 Q8NDV7 TNRC6A Q8NDV7.T1470.p_TNRC6A Q8NDV7_T1470t _1_1_1470_1470 Q8NDV7 Q8NDV7|Q8NDV7-5|Q8NDV7-6|Q8NDV7-2|Q8NDV7-3 Trinucleotide repeat-containing gene 6A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9770.9770.3 19.97 19.97 1.932 2 1 1 0 828.0937 2402.3015 T1470t TMT10 1468 (K) QQtPPSQQQPLHQPAMK (S) QQT(0.99)PPS(0.0)QQQPLHQPAMK K:TMT10,t:Phosphorylated T TNRC6A 211092.3 1 13 181.1 478.43 HUMAN 1 -4.1951 -22.3484 NLMKKAASITSEVFN-p Q9Y5B9;S188-p NLMKKAASITSEVFN 0.653780563370571 0.0945894044974854 0.0616666666666667 0.186333333333333 3.46038217286872 13.543587865688 0.0616666666666667 0.186333333333333 0.450777035068324 0.0442222884899393 0.812465604939188 2.60799240140385 Q9Y5B9 SUPT16H Q9Y5B9.S188.p_SUPT16H Q9Y5B9_S188s _1_1_188_188 Q9Y5B9 Q9Y5B9 FACT complex subunit SPT16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22642.22642.2 14.75 14.75 2.267 3 1 1 0 852.9517 1624.931 S188s TMT10 186 (K) AAsITSEVFNK (F) AAS(0.99)IT(0.0)S(0.0)EVFNK K:TMT10,s:Phosphorylated S SUPT16H 120482.1 6 1 1519.1 134.4 HUMAN 1 3.4604 13.5436 NLNDRLASYLDKVRA-p P08727;S93-p NLNDRLASYLDKVRA 0.297927914099142 0.0357876972920727 -0.247 0.272333333333333 9.89015679591251 19.4676016628525 -0.247 0.272333333333333 0.102561489720007 0.0113042000269188 -1.96263310845539 3.76221062650908 P08727 KRT19 P08727.S93.p_KRT19 P08727_S93s _1_1_93_93 P08727 P19012|P08727 Keratin, type I cytoskeletal 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27767.27767.3 17.47 11.71 8.278 3 1 1 0 811.7593 2353.295 S93s TMT10 82 (K) LTMQNLNDRLAsYLDK (V) LT(0.0)MQNLNDRLAS(0.99)Y(0.0)LDK K:TMT10,s:Phosphorylated S KRT19 44105.2 6 11 383.1 334.07 HUMAN 1 -9.8902 19.4676 NLNLRAVTPNQVRDL-p Q8TDZ2-4;T494-p NLNLRAVTPNQVRDL 0.32553307217158 0.20961528948841 -0.192666666666667 0.203 9.12858077616899 8.9267544596822 -0.192666666666667 0.203 0.122219899532206 0.128033776013209 -1.83062322695286 1.79504364989021 Q8TDZ2 MICAL1 Q8TDZ2.4.T494.p_MICAL1 Q8TDZ2-4_T494t _1_1_494_494 Q8TDZ2-4 Q8TDZ2-4|Q8TDZ2-2 Isoform 4 of [F-actin]-monooxygenase MICAL1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30203.30203.3 8.48 8.48 8.479 2 1 1 0 780.7608 2260.3065 T494t TMT10 492 (R) AVtPNQVRDLYDVLAK (E) AVT(0.99)PNQVRDLY(0.0)DVLAK K:TMT10,t:Phosphorylated T MICAL1 121074 2 1 4608.1 28.83 HUMAN 1 -9.1286 8.9268 NLNNTVLSKRKLTWF-p P07814;S434-p NLNNTVLSKRKLTWF 0.315689954032061 0.2594077397734 -0.144666666666667 -0.128333333333333 9.37145195803238 7.71961010001474 -0.144666666666667 -0.128333333333333 0.115572578877084 0.169059270250591 -1.87268447713865 -1.58599516509672 P07814 EPRS P07814.S434.p_EPRS P07814_S434s _1_1_434_434 P07814 P07814 Bifunctional glutamate/proline--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21466.21466.2 14.91 14.91 4.053 2 1 1 0 827.471 1573.9678 S434s TMT10 426 (R) LNLNNTVLsK (R) LNLNNT(0.0)VLS(0.99)K K:TMT10,s:Phosphorylated S EPRS 172185.3 2 2 375.1 337.76 HUMAN 1 -9.3715 -7.7196 NLPSESRSRSKSASK-p Q08170;S460-p NLPSESRSRSKSASK 0.765144944930961 0.0257622381052915 -0.056 0.549 2.23235002573693 21.6133855617244 -0.056 0.549 0.598087874106529 0.00689701934043615 -0.559664202656317 4.22970418668977 Q08170 SRSF4 Q08170.S460.p_SRSF4 Q08170_S460s _1_1_460_460 Q08170 Q08170 Serine/arginine-rich splicing factor 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7126.7126.3 9.98 9.98 2.3 4 1 1 0 632.6749 1816.0441 S460s TMT10 450 (K) SKPNLPSESRsR (S) S(0.0)KPNLPS(0.0)ES(0.0)RS(0.99)R K:TMT10,s:Phosphorylated S SRSF4 56791.5 2 4 743.2 233.79 HUMAN 1 -2.2324 21.6134 NLPSIQVSPALPLFP-p Q9Y5G6-2;S810-p NLPSIQVSPALPLFP 0.68850718716697 0.435038143277561 -0.116 0.152666666666667 3.04209424189304 4.81636152593346 -0.116 0.152666666666667 0.496352913910551 0.329885971478648 -0.728949220806077 1.07008582235584 Q9Y5G6 PCDHGA7 Q9Y5G6.2.S810.p_PCDHGA7 Q9Y5G6-2_S810s _1_1_810_810 Q9Y5G6-2 Q9Y5G6-2 Isoform 2 of Protocadherin gamma-A7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37801.37801.3 13.24 13.24 5.988 2 1 1 0 677.6981 1951.1102 S810s TMT10 802 (K) ENLPSIQVsPALPLFP (-) ENLPS(0.0)IQVS(0.99)PALPLFP s:Phosphorylated S PCDHGA7 90058.7 2 1 6197.1 13.24 HUMAN 1 -3.0421 4.8164 NLQELRRSASLATKV-p Q2TAP0;S14-p NLQELRRSASLATKV 0.925499011716659 0.461787409782068 -0.0203333333333333 0.0886666666666667 0.663362467240566 4.47528481873271 -0.0203333333333334 0.0886666666666667 0.858348699114232 0.356838346366201 -0.18716527074294 1.00677268897061 Q2TAP0 GOLGA7B Q2TAP0.S14.p_GOLGA7B Q2TAP0_S14s _1_1_14_14 Q2TAP0 Q2TAP0|M0R0R5 Golgin subfamily A member 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9607.9916.2 10.89 10.89 3.212 3 1 1 0 608.3417 1135.7087 S14s TMT10 14 (R) sASLATK (V) S(0.99)AS(0.0)LAT(0.0)K K:TMT10,s:Phosphorylated S GOLGA7B 18619.6 2 1 6566.1 10.89 HUMAN 1 -0.6634 4.4753 NLQEVVKSPKDPSQL-p Q9NXG2;S270-p NLQEVVKSPKDPSQL 0.523571875135556 0.0219969970530809 -0.0903333333333333 0.414666666666667 5.19893732029357 22.6524437675525 -0.0903333333333333 0.414666666666667 0.302069076595975 0.00542944731457084 -1.14039259111531 4.46783639364797 Q9NXG2 THUMPD1 Q9NXG2.S270.p_THUMPD1 Q9NXG2_S270s _1_1_270_270 Q9NXG2 Q9NXG2 THUMP domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17977.17977.3 17.98 13.82 4.76 4 1 1 0 1057.5892 3090.7969 S270s TMT10 262 (K) YNLQEVVKsPKDPSQLNSK (Q) Y(0.0)NLQEVVKS(0.99)PKDPS(0.0)QLNS(0.0)K K:TMT10,s:Phosphorylated S THUMPD1 39714.1 8 4 1805.1 113.76 HUMAN 1 -5.1989 22.6524 NLQPLMRSPISRQQD-p Q7Z6E9;S360-p NLQPLMRSPISRQQD 0.369979368725509 0.0663476458173452 0.148333333333333 -0.229333333333333 8.00746051752281 15.6717102774644 0.148333333333333 -0.229333333333333 0.158217292459723 0.0270912455245408 1.63645479170508 -3.00333759249498 Q7Z6E9 RBBP6 Q7Z6E9.S360.p_RBBP6 Q7Z6E9_S360s _1_1_360_360 Q7Z6E9 Q7Z6E9|Q7Z6E9-2|Q7Z6E9-4 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15346.15554.3 13.6 13.6 2.253 2 1 1 0 574.3094 1640.9468 S360s TMT10 353 (R) NLQPLMRsPISR (Q) NLQPLMRS(0.99)PIS(0.0)R s:Phosphorylated S RBBP6 202473.6 7 1 27.1 935.6 HUMAN 1 8.0075 -15.6717 NLQQAIVTPLKPVDN-p Q9ULW0;T72-p NLQQAIVTPLKPVDN 0.887259194808546 0.00542252106697309 0.023 -0.822666666666667 1.0137285483236 32.8815003706636 0.023 -0.822666666666667 0.791821236312371 0.000515050677681481 0.277318552874809 -7.34590433288209 Q9ULW0 TPX2 Q9ULW0.T72.p_TPX2 Q9ULW0_T72t _1_1_72_72 Q9ULW0 Q9ULW0-2 Targeting protein for Xklp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22924.22924.4 18.51 18.51 6.497 4 1 1 0 761.6758 2963.7173 T72t TMT10 64 (K) ANLQQAIVtPLKPVDNTYYK (E) ANLQQAIVT(0.99)PLKPVDNT(0.0)Y(0.0)Y(0.0)K K:TMT10,t:Phosphorylated T TPX2 86279.1 2 1 599.1 263.33 HUMAN 1 1.0137 -32.8815 NLQYPDDSDDEKKAG-p Q15223;S422-p NLQYPDDSDDEKKAG 0.239022391306725 0.278610598132371 -0.345333333333333 0.107333333333333 11.8837025269154 7.31160775068894 -0.345333333333333 0.107333333333333 0.0648081683486443 0.185711682637083 -2.3117235139631 1.51501836328942 Q15223 PVRL1 Q15223.S422.p_PVRL1 Q15223_S422s _1_1_422_422 Q15223 Q15223 Nectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13007.13007.4 25.83 25.83 4.803 2 1 1 0 811.1316 3161.5362 S422s TMT10 403 (K) AGIPQHHPPMAQNLQYPDDsDDEK (K) AGIPQHHPPMAQNLQY(0.0)PDDS(0.99)DDEK K:TMT10,s:Phosphorylated S NECTIN1 57499.4 28 2 885.1 206.68 HUMAN 1 -11.8837 7.3116 NLRFRDASLVFKVAE-p P61221;S328-p NLRFRDASLVFKVAE 0.674176530432026 0.756049075547467 -0.0723333333333333 -0.046 3.20937152522037 1.67892839165337 -0.0723333333333334 -0.046 0.477598382714715 0.679371244713509 -0.762626450213312 -0.436415179430616 P61221 ABCE1 P61221.S328.p_ABCE1 P61221_S328s _1_1_328_328 P61221 P61221|D6R9I9 ATP-binding cassette sub-family E member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20585.20585.3 7.98 7.98 99 1 1 1 0 540.9689 1540.9252 S328s TMT10 324 (R) FRDAsLVFK (V) FRDAS(1.0)LVFK K:TMT10,s:Phosphorylated S ABCE1 68283 1 3 4358.1 32.8 HUMAN 1 -3.2094 -1.6789 NLRNIHSSDWPKFFE-p Q9Y224;S54-p NLRNIHSSDWPKFFE 0.723063863780764 0.384002504326444 0.056 0.119 2.6641875197157 5.52495870508741 0.056 0.119 0.541478538482873 0.280223226657963 0.651338797130297 1.19918470199898 Q9Y224 C14orf166 Q9Y224.S54.p_C14orf166 Q9Y224_S54s _1_1_54_54 Q9Y224 Q9Y224|G3V4C6|G3V4E7 RNA transcription, translation and transport factor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13204.13204.3 12.16 12.16 1.109 2 1 1 0 541.277 1541.8476 S54s TMT10 50 (R) NIHSsDWPK (F) NIHS(0.0)S(0.99)DWPK K:TMT10,s:Phosphorylated S RTRAF 28181.7 2 1 5345.1 20.24 HUMAN 1 2.6642 5.525 NLSCRRASDSLSARP-p Q8NB49;S1108-p NLSCRRASDSLSARP 0.651762633303649 0.146481720175667 0.0606666666666667 0.183666666666667 3.48506430253572 10.9867667847042 0.061542014922665 0.183666666666667 0.448222413474093 0.0796752292103694 0.817323960415671 2.15282192983329 Q8NB49 ATP11C Q8NB49.S1108.p_ATP11C Q8NB49_S1108s _1_1_1108_1108 Q8NB49 Q8NB49 Phospholipid-transporting ATPase IG HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13402.13402.5 14.1 14.1 2.676 4 1 1 0 461.4644 2223.3247 S1108s TMT10 1106 (R) RAsDSLSARPSVRPLLLR (T) RAS(0.99)DS(0.0)LS(0.0)ARPS(0.0)VRPLLLR s:Phosphorylated S ATP11C 130958.2 5 2 1954.1 105.25 HUMAN 1 3.4851 10.9868 NLSDIIQSPSSTGLL-p Q9P2D0;S1004-p NLSDIIQSPSSTGLL 0.0733303965853216 0.00179254402382112 -0.361666666666667 -0.898 24.3704880353505 43.2861522148397 -0.361666666666667 -0.898 0.00365553710465424 4.69228927955173e-05 -4.88608736127116 -11.7129645788174 Q9P2D0 IBTK Q9P2D0.S1004.p_IBTK Q9P2D0_S1004s_1_1_1004_1004 Q9P2D0 Q9P2D0|Q9P2D0-2|E9PDR5 Inhibitor of Bruton tyrosine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28931.28931.4 11.4 11.4 1.198 9 1 1 0 717.1113 2784.4667 N997n S1004s TMT10 990 (R) SDSSGGYnLSDIIQsPSSTGLLK (S) S(0.0)DS(0.0)S(0.0)GGY(0.0)N(1.0)LS(0.0)DIIQS(0.99)PS(0.0)S(0.0)T(0.0)GLLK K:TMT10,n:Deamidated,s:Phosphorylated S IBTK 152465 2 3 907.1 202.21 HUMAN 1 -24.3705 -43.2862 NLSEQGMSPPRPTRS-p Q8IWT3;S329-p NLSEQGMSPPRPTRS 0.688779313169076 0.186186189492269 0.0593333333333333 0.133666666666667 3.03836083286031 9.60177657747144 0.0593333333333333 0.133666666666667 0.496779786749317 0.109602974925637 0.728193103158701 1.91186188642531 Q8IWT3 CUL9 Q8IWT3.S329.p_CUL9 Q8IWT3_S329s _1_1_329_329 Q8IWT3 Q8IWT3|E9PEZ1|Q8IWT3-3 Cullin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9476.9681.3 14.51 14.51 4.07 3 1 1 0 626.9751 1798.9431 S329s TMT10 322 (R) NLSEQGMsPPRPTR (S) NLS(0.0)EQGMS(0.99)PPRPT(0.0)R s:Phosphorylated S CUL9 285617.3 4 2 1190.1 168.21 HUMAN 1 3.0384 9.6018 NLSMPKVSGPDLDLN-p Q09666;S5298-p NLSMPKVSGPDLDLN 0.376473979616845 0.0205344648135939 -0.230666666666667 0.773666666666667 7.84735110098932 23.0918912086426 -0.230666666666667 0.773666666666667 0.164159072586756 0.00490694148569046 -1.6086684897393 4.57103809611912 Q09666 AHNAK Q09666.S5298.p_AHNAK Q09666_S5298s _1_1_5298_5298 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24924.24924.3 10.91 7.43 99 1 1 1 0 570.3152 1628.9623 S5298s TMT10 5297 (K) VsGPDLDLNLK (G) VS(1.0)GPDLDLNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 128 1.1 4313.36 HUMAN 1 -7.8474 23.0919 NLSPTPASPNQGPPP-p Q9C0E8;S182-p NLSPTPASPNQGPPP 0.660412515639265 0.567866779963253 0.0693333333333333 -0.0576666666666667 3.37441879324472 3.31281621445742 0.0693333333333333 -0.0576666666666667 0.45978851689985 0.466356869705735 0.795486957705232 -0.783146489280291 Q9C0E8 KIAA1715 Q9C0E8.S182.p_KIAA1715 Q9C0E8_S182sS194s_2_2_182_194 Q9C0E8 Q9C0E8-4|Q9C0E8-2|Q9C0E8-3 Endoplasmic reticulum junction formation protein lunapark HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20993.20993.4 12.5 12.5 1.847 4 2 2 0 770.6436 2918.614 S182s N184n S194s TMT10 175 (R) NLSPTPAsPnQGPPPQVPVsPGPPK (D) N(0.0)LS(0.0)PT(0.0)PAS(0.99)PN(0.99)QGPPPQVPVS(0.99)PGPPK K:TMT10,s:Phosphorylated S,n:Deamidated LNPK 48081.4 2 11 1776.1 115.62 HUMAN 1 3.3744 -3.3128 NLSSRPASPNSSSGQ-p Q659A1;S605-p NLSSRPASPNSSSGQ 0.123401035738524 0.3521983733342 -0.342333333333333 0.121 18.9000177292653 6.00850663750543 -0.342333333333333 0.121 0.0128824429266443 0.250697115048822 -3.64675767975544 1.28577256095196 Q659A1 ICE2 Q659A1.S605.p_ICE2 Q659A1_S605s _1_1_605_605 Q659A1 Q659A1 Little elongation complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16903.16903.4 31.5 31.24 1.145 13 1 1 0 1169.3125 4594.2514 S605s TMT10 592 (K) TAVVGSNLSSRPAsPNSSSGQASVGNQTNTACSPEESCVLK (K) T(0.0)AVVGS(0.0)NLS(0.0)S(0.0)RPAS(0.99)PNS(0.0)S(0.0)S(0.0)GQAS(0.0)VGNQT(0.0)NT(0.0)ACS(0.0)PEES(0.0)CVLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ICE2 111036.5 5 7 1160.1 171.12 HUMAN 1 -18.9 6.0085 NLSTRTCSPWSHSEE-p Q92628;S712-p NLSTRTCSPWSHSEE 0.148266672319898 0.989079974009455 0.280666666666667 -0.00266666666666665 16.7664378669988 0.0716151892391281 0.280666666666667 -0.00266666666666667 0.0210550469074763 0.983645209186113 3.2167732017889 -0.0214614689905226 Q92628 KIAA0232 Q92628.S712.p_KIAA0232 Q92628_S712s _1_1_712_712 Q92628 Q92628 Uncharacterized protein KIAA0232 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7300.7300.3 11.06 11.06 1.148 5 1 1 0 595.9215 1705.7801 S712s TMT10 710 (R) TCsPWSHSEETR (S) T(0.0)CS(0.99)PWS(0.0)HS(0.0)EET(0.0)R C:Carbamidomethylation,s:Phosphorylated S KIAA0232 157125.3 1 5 568.1 270.65 HUMAN 1 16.7664 -0.0716 NLTGCLESGGSEEPG-p Q9C0C2;S1211-p NLTGCLESGGSEEPG 0.97105532437651 0.426456511913706 -0.00566666666666667 -0.081 0.25039311290717 4.92678786654749 -0.00566666666666667 -0.081 0.943975426036143 0.321603830887189 -0.0735965238985408 -1.09040670418322 Q9C0C2 TNKS1BP1 Q9C0C2.S1211.p_TNKS1BP1 Q9C0C2_S1211sS1214s_2_2_1211_1214 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25844.25844.3 17.65 17.65 6.123 3 2 2 0 1004.4492 2851.3854 S1211s S1214s TMT10 1202 (R) DMNLTGCLEsGGsEEPGGIGVGEK (D) DMNLT(0.0)GCLES(0.99)GGS(0.99)EEPGGIGVGEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 1 83 4.1 2105.7 HUMAN 1 -0.2504 -4.9268 NLTLHANSVRKRGMS-p Q86X02;S344-p NLTLHANSVRKRGMS 0.0767901617046939 0.112553955980954 0.430666666666667 -0.318333333333333 23.8861995976591 12.5123393187417 0.430666666666667 -0.318333333333333 0.00408676852792773 0.0560745850013439 4.76710453154082 -2.42228324604876 Q86X02 CDR2L Q86X02.S344.p_CDR2L Q86X02_S344s _1_1_344_344 Q86X02 Q86X02 Cerebellar degeneration-related protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6156.6156.3 17.33 17.33 2.488 2 1 1 0 566.9595 1618.8975 S344s TMT10 334 (R) HAGNLTLHANsVR (K) HAGNLT(0.0)LHANS(0.99)VR s:Phosphorylated S CDR2L 53408.9 1 5 1833.1 112.07 HUMAN 1 23.8862 -12.5123 NLTYELPTLNQEQEN-p Q6P0N0;T223-p NLTYELPTLNQEQEN 0.11679006213907 0.945818175866251 0.314 0.0116666666666667 19.4084022505733 0.34734019754633 0.314 0.0116666666666667 0.0114593444791914 0.923136621838162 3.75312166540938 0.101057554370981 Q6P0N0 MIS18BP1 Q6P0N0.T223.p_MIS18BP1 Q6P0N0_T218tT223t_2_2_218_223 Q6P0N0 Q6P0N0|G5E9K5|Q6P0N0-2 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28411.28411.4 13.33 13.33 3.638 3 2 2 0 940.2287 3596.9477 T218t T223t N225n TMT10 211 (K) KAPLHNLtYELPtLnQEQENFLAVEAR (N) KAPLHN(0.0)LT(0.99)Y(0.0)ELPT(0.99)LN(0.99)QEQEN(0.0)FLAVEAR K:TMT10,t:Phosphorylated T,n:Deamidated MIS18BP1 129996 1 39 54.1 728.39 HUMAN 1 19.4084 0.3473 NLVHATNSEEDIKKL-p Q7Z3T8;S142-p NLVHATNSEEDIKKL 0.734662727835375 0.00752314179680432 -0.05 -0.468 2.53605650158082 30.3609929744218 -0.05 -0.468 0.5576919167735 0.000920239143474549 -0.624495260274487 -6.53219448163664 Q7Z3T8 ZFYVE16 Q7Z3T8.S142.p_ZFYVE16 Q7Z3T8_S142s _1_1_142_142 Q7Z3T8 Q7Z3T8|Q7Z3T8-3 Zinc finger FYVE domain-containing protein 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30719.30719.4 24.28 18.98 1.125 4 1 1 0 929.2155 3633.853 S142s TMT10 122 (R) CSKPICDLISDMGNLVHATNsEEDIK (K) CS(0.0)KPICDLIS(0.0)DMGNLVHAT(0.0)NS(0.99)EEDIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZFYVE16 171296.7 3 3 872.1 209.65 HUMAN 1 -2.5361 -30.361 NLVKAAQSLDEMSQT-p Q8TDY2;S624-p NLVKAAQSLDEMSQT 0.0392760190421918 0.0028998898692722 0.637666666666667 0.686666666666667 31.7418889807178 38.3270690434939 0.637666666666667 0.686666666666667 0.000669593303860538 0.000146991795778998 6.98010913549392 9.40377596408533 Q8TDY2 RB1CC1 Q8TDY2.S624.p_RB1CC1 Q8TDY2_S624s _1_1_624_624 Q8TDY2 Q8TDY2|Q8TDY2-2 RB1-inducible coiled-coil protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36700.36700.2 22.1 22.1 2.796 5 1 1 0 1373.6851 2666.3959 S624s TMT10 621 (K) AAQsLDEMSQTITDLLSEQK (A) AAQS(0.99)LDEMS(0.0)QT(0.0)IT(0.0)DLLS(0.0)EQK K:TMT10,s:Phosphorylated S RB1CC1 185198.6 5 5 707.1 238.96 HUMAN 1 31.7419 38.3271 NLWKSDSSLETMENT-p Q9Y2H2;S830-p NLWKSDSSLETMENT 0.15636344485557 0.462663228122581 -0.356333333333333 0.0796666666666667 16.1728077586693 4.46351814982997 -0.356333333333333 0.0796666666666667 0.0241389971876733 0.357806466397798 -3.10144187358514 1.00457272573405 Q9Y2H2 INPP5F Q9Y2H2.S830.p_INPP5F Q9Y2H2_S829sS830s_2_2_829_830 Q9Y2H2 Q9Y2H2|Q9Y2H2-4 Phosphatidylinositide phosphatase SAC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28101.28101.3 12.62 12.62 1.158 5 2 2 0 1077.851 3071.5996 S829s S830s TMT10 822 (K) VNLWKSDssLETMENTGVMDK (V) VNLWKS(0.0)DS(0.99)S(0.99)LET(0.0)MENT(0.0)GVMDK K:TMT10,s:Phosphorylated S INPP5F 129431.7 1 8 928.1 199.49 HUMAN 1 -16.1728 4.4635 NLYGCRESLIDGIKR-p P23526;S198-p NLYGCRESLIDGIKR 0.123350251698765 0.0104377289471877 0.433333333333333 -0.504333333333333 18.9249008864397 27.8063514046214 0.433333333333334 -0.504333333333333 0.0128088432621262 0.00165716159363773 3.65192671937099 -5.78319241079068 P23526 AHCY P23526.S198.p_AHCY P23526_S198s _1_1_198_198 P23526 P23526|P23526-2 Adenosylhomocysteinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19099.19099.4 10.21 5.17 4.503 3 1 1 0 760.4084 2958.6438 S198s TMT10 187 (K) SKFDNLYGCREsLIDGIKR (A) S(0.0)KFDNLY(0.0)GCRES(0.99)LIDGIKR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S AHCY 48285.8 1 3 3386.1 52.27 HUMAN 1 18.9249 -27.8064 NMAPSQQSPVRTASV-p Q9NYB9-2;S221-p NMAPSQQSPVRTASV 0.229977783899196 0.019010174030327 -0.177 -0.459666666666667 12.2653531895479 23.66869801952 -0.177 -0.459666666666667 0.0593560075015454 0.004296652176899 -2.37949118815634 -4.70883677432117 Q9NYB9 ABI2 Q9NYB9.2.S221.p_ABI2 Q9NYB9-2_S221s _1_1_221_221 Q9NYB9-2 Q9NYB9|F8WAL6|Q9NYB9-4|A0A0C4DG21|E7EW77|Q9NYB9-2|Q9NYB9-3|B7Z836 Isoform 2 of Abl interactor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6974.6974.3 16.76 16.76 2.142 4 1 1 0 760.7062 2200.1454 S221s TMT10 214 (R) NMAPSQQsPVRTASVNQR (N) NMAPS(0.0)QQS(0.99)PVRT(0.0)AS(0.0)VNQR s:Phosphorylated S ABI2 52501.9 12 6 1041.1 185.01 HUMAN 1 -12.2654 -23.6687 NMDAPPLSPYPFVRT-p Q08999;S1035-p NMDAPPLSPYPFVRT 0.0635108641161859 0.000952253650599092 -0.418666666666667 -1.44266666666667 26.0022210797483 54.5088787725697 -0.418666666666667 -1.44266666666667 0.0025106021246809 3.54088745138925e-06 -5.30216962153813 -19.0612527485512 Q08999 RBL2 Q08999.S1035.p_RBL2 Q08999_S1035s _1_1_1035_1035 Q08999 Q08999 Retinoblastoma-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25906.25906.3 18.01 18.01 8.393 4 1 1 0 788.0411 2282.1477 S1035s TMT10 1024 (K) YSQANMDAPPLsPYPFVR (T) Y(0.0)S(0.0)QANMDAPPLS(0.99)PY(0.0)PFVR s:Phosphorylated S RBL2 129790.7 2 14 408.1 323.79 HUMAN 1 -26.0022 -54.5089 NMDDDRLSRRADDDR-p Q14152;S1149-p NMDDDRLSRRADDDR 0.25821426512945 0.725387639893868 0.244 0.036 11.1724560173022 1.9201028421735 0.244 0.036 0.0763403942137459 0.64267249846854 2.18635010133045 0.490978453365202 Q14152 EIF3A Q14152.S1149.p_EIF3A Q14152_S1149s _1_1_1149_1149 Q14152 Q14152|Q14152-2 Eukaryotic translation initiation factor 3 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5704.5704.3 11.25 7.57 99 1 1 1 0 477.5483 1350.6633 S1149s TMT10 1142 (R) NMDDDRLsR (R) NMDDDRLS(1.0)R s:Phosphorylated S EIF3A 166965.8 2 8 1342.1 151.61 HUMAN 1 11.1725 1.9201 NMELMKLTPEKVQNW-p P81274;T418-p NMELMKLTPEKVQNW 0.0499167591004882 0.00372619220137502 0.644333333333333 -1.23366666666667 28.7889204612964 36.0372393871729 0.644333333333334 -1.23366666666667 0.00132162411339392 0.000249043987479772 6.07194679538408 -8.48400961300211 P81274 GPSM2 P81274.T418.p_GPSM2 P81274_S408sT418t_2_2_408_418 P81274 P81274 G-protein-signaling modulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25270.25270.5 12.11 9.5 2.558 3 2 2 0 867.45 4173.2793 S408s T418t TMT10 406 (R) RHsMENMELMKLtPEKVQNWNSEILAK (Q) RHS(0.99)MENMELMKLT(0.99)PEKVQNWNS(0.0)EILAK K:TMT10,s:Phosphorylated S,t:Phosphorylated T GPSM2 77402.4 1 5 3014.1 63.23 HUMAN 1 28.7889 -36.0372 NMGSNTKSLDNNYST-p O60716-3;S899-p NMGSNTKSLDNNYST 0.233493203593579 0.576761134468094 0.266333333333333 -0.104333333333333 12.1337310571665 3.22329401118189 0.266333333333333 -0.104333333333333 0.0611824542724659 0.476069763246085 2.35607741497693 -0.765300042410044 O60716 CTNND1 O60716.3.S899.p_CTNND1 O60716-3_S899s _1_1_899_899 O60716-3 O60716-3|C9JZR2|O60716-5|O60716-9|O60716-10|O60716-11|O60716-13|O60716-17|O60716-18|O60716-19|O60716-21|O60716-25|O60716-26|O60716-27|O60716-29 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8915.8915.3 14.41 14.41 5.89 4 1 1 0 573.591 1638.7921 S899s TMT10 899 (K) sLDNNYSTPNER (G) S(0.99)LDNNY(0.0)S(0.0)T(0.0)PNER s:Phosphorylated S CTNND1 105545.3 5 38 21.1 1014.17 HUMAN 1 12.1337 -3.2233 NMIEEIKTPASTPVS-p Q9UHR4;T248-p NMIEEIKTPASTPVS 0.191102046396083 0.410800621178379 0.199666666666667 0.078 14.0418029533884 5.13984771899235 0.199666666666667 0.078 0.0394293578943581 0.306207080025217 2.70059681487127 1.12939153172007 Q9UHR4 BAIAP2L1 Q9UHR4.T248.p_BAIAP2L1 Q9UHR4_T248t _1_1_248_248 Q9UHR4 Q9UHR4 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29679.29679.4 10.15 10.15 1.224 6 1 1 0 892.4543 3486.8411 T248t TMT10 239 (K) IMNMIEEIKtPASTPVSGTPQASPMIER (S) IMNMIEEIKT(0.99)PAS(0.0)T(0.0)PVS(0.0)GT(0.0)PQAS(0.0)PMIER K:TMT10,t:Phosphorylated T BAIAP2L1 57224 2 2 661.1 251.53 HUMAN 1 14.0418 5.1398 NMMSKLSSEDEEEDE-p Q8NEJ9;S143-p NMMSKLSSEDEEEDE 0.911846154803843 0.231815142185116 -0.0233333333333333 0.137666666666667 0.780313073553581 8.36271951794711 -0.0233333333333333 0.137666666666667 0.83554278357754 0.145790104819238 -0.21782657070821 1.69746772432835 Q8NEJ9 NGDN Q8NEJ9.S143.p_NGDN Q8NEJ9_S143s _1_1_143_143 Q8NEJ9 Q8NEJ9|Q8NEJ9-2 Neuroguidin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11489.11489.3 20.13 20.13 1.104 4 1 1 0 946.3967 2757.211 S143s TMT10 141 (K) LSsEDEEEDEAEDDQSEASGK (K) LS(0.0)S(0.99)EDEEEDEAEDDQS(0.0)EAS(0.0)GK K:TMT10,s:Phosphorylated S NGDN 35893.5 3 1 2339.1 87.27 HUMAN 1 -0.7803 8.3627 NMNGINNSSGMVDAR-p Q15819;S94-p NMNGINNSSGMVDAR 0.158297715435374 0.177382663662266 0.228 0.169666666666667 16.0594334762721 9.87904586847147 0.228 0.169666666666667 0.0247774525076245 0.102824217493516 3.07961046107142 1.95992226138815 Q15819 UBE2V2 Q15819.S94.p_UBE2V2 Q15819_S94s _1_1_94_94 Q15819 Q15819|G3V113 Ubiquitin-conjugating enzyme E2 variant 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17256.17256.3 10.98 10.98 1.183 2 1 1 0 667.9739 1921.9421 S94s TMT10 86 (K) INMNGINNsSGMVDAR (S) INMNGINNS(0.99)S(0.0)GMVDAR s:Phosphorylated S UBE2V2 16419.5 2 1 5619.1 17.65 HUMAN 1 16.0594 9.879 NMSERVLSPPKLNEV-p Q9H6Z4-3;S265-p NMSERVLSPPKLNEV 0.650123190527967 0.143072834818274 -0.0606666666666667 0.268666666666667 3.50768850778575 11.1272054443434 -0.0606666666666667 0.268666666666667 0.445893507948065 0.0771399682121026 -0.821770847237555 2.17741498378872 Q9H6Z4 RANBP3 Q9H6Z4.3.S265.p_RANBP3 Q9H6Z4-3_S265s _1_1_265_265 Q9H6Z4-3 Q9H6Z4|Q9H6Z4-2|Q9H6Z4-3|B7Z7F3 Isoform 3 of Ran-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18557.18763.3 16.99 11.57 6.011 3 1 1 0 755.4072 2184.2389 S265s TMT10 263 (R) VLsPPKLNEVSSDANR (E) VLS(0.99)PPKLNEVS(0.0)S(0.0)DANR K:TMT10,s:Phosphorylated S RANBP3 53752.1 9 12 444.1 311.24 HUMAN 1 -3.5077 11.1272 NMSKVVDSLYNKAKK-p O00231-2;S414-p NMSKVVDSLYNKAKK 0.808252519018456 0.674366103823264 0.035 0.044 1.775658144887 2.33860155762956 0.035 0.044 0.664406978745406 0.58363300574758 0.458526113470632 0.582475330604359 O00231 PSMD11 O00231.2.S414.p_PSMD11 O00231-2_S414s _1_1_414_414 O00231-2 O00231-2 Isoform 2 of 26S proteasome non-ATPase regulatory subunit 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17120.17120.2 9.55 9.55 7.584 2 1 1 0 738.4005 1395.8248 S414s TMT10 411 (K) VVDsLYNK (A) VVDS(0.99)LY(0.0)NK K:TMT10,s:Phosphorylated S PSMD11 47819.3 1 4 2992.1 63.85 HUMAN 1 1.7757 2.3386 NMSSAPGSRSGSRSG-p P15924;S2825-p NMSSAPGSRSGSRSG 0.955045601152663 0.0734317753531384 0.0253333333333333 0.443 0.392295146261145 15.0586846536856 0.0253333333333333 0.443 0.913630281314202 0.0311983434425149 0.113626962134386 2.8875714813356 P15924 DSP P15924.S2825.p_DSP P15924_S2825s _1_1_2825_2825 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16977.17181.3 16.3 16.3 1.535 5 1 1 0 610.6208 1749.8791 S2825s TMT10 2812 (K) GLPSPYNMSSAPGsR (S) GLPS(0.0)PY(0.0)NMS(0.0)S(0.0)APGS(0.99)R s:Phosphorylated S DSP 334221.3 2 23 104.1 590.4 HUMAN 1 0.3923 15.0587 NMVQFSHSKDFQKVN-p Q9UHF7-2;S289-p NMVQFSHSKDFQKVN 0.072097360428574 0.081564155697089 -0.637 -0.276 24.6066474153929 14.4316190339889 -0.637 -0.276 0.00346206532683815 0.0360444245671606 -4.94483757314365 -2.77079029594642 Q9UHF7 TRPS1 Q9UHF7.2.S289.p_TRPS1 Q9UHF7-2_S289s _1_1_289_289 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3|E5RJ97 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21324.21324.4 19.59 19.59 1.242 2 1 1 0 541.5443 2083.1887 S289s TMT10 277 (K) ILALHNMVQFSHsK (D) ILALHNMVQFS(0.0)HS(0.99)K K:TMT10,s:Phosphorylated S TRPS1 145246 3 11 14.1 1150.14 HUMAN 1 -24.6066 -14.4316 NNASLSKSVGVSNRQ-p Q6Y7W6-5;S1098-p NNASLSKSVGVSNRQ 0.919774718344234 0.00384334650717516 -0.0176666666666667 -0.769333333333333 0.709149247650881 35.7461191836423 -0.0176666666666667 -0.769333333333333 0.849346839813987 0.000266310372235492 -0.199241190695422 -8.37298290210835 Q6Y7W6 GIGYF2 Q6Y7W6.5.S1098.p_GIGYF2 Q6Y7W6-5_S1098s _1_1_1098_1098 Q6Y7W6-5 Q6Y7W6-5|Q6Y7W6-4 Isoform 4 of GRB10-interacting GYF protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5231.5231.2 9.58 9.58 9.585 2 1 1 0 514.2607 947.5472 S1098s TMT10 1098 (K) sVGVSNR (Q) S(0.99)VGVS(0.0)NR s:Phosphorylated S GIGYF2 149826.1 1 14 470.1 302.35 HUMAN 1 -0.7091 -35.7461 NNAYLAQSPQLYKQM-p P14868;S249-p NNAYLAQSPQLYKQM 0.560567639843939 0.72204717354958 -0.0903333333333333 0.0363333333333333 4.63340428891498 1.94689024099402 -0.0903333333333334 0.0351836221911266 0.344080112156206 0.638720677451224 -1.03642771893326 0.496950974791702 P14868 DARS P14868.S249.p_DARS P14868_S249s _1_1_249_249 P14868 P14868|P14868-2 Aspartate--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17851.17851.3 17.03 17.03 7.386 3 1 1 0 683.3596 1968.0955 S249s TMT10 242 (K) NNAYLAQsPQLYK (Q) NNAY(0.0)LAQS(0.99)PQLY(0.0)K K:TMT10,s:Phosphorylated S DARS 57534.6 7 3 3746.1 44.03 HUMAN 1 -4.6334 1.9469 NNDALHMSLESLICE-p E7EW20;S604-p NNDALHMSLESLICE 0.626617753150603 0.1082652959342 0.0716666666666667 0.221 3.77115439697006 12.7576525500988 0.0716666666666667 0.221 0.419647422798393 0.0529949815130909 0.873124765525346 2.46616450826783 E7EW20 NotFound E7EW20.S604.p_NotFound E7EW20_S604s _1_1_604_604 E7EW20 E7EW20|Q9UM54|A0A0D9SGC1|Q9UM54-1|Q9UM54-4 Unconventional myosin-VI HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25183.25183.3 19.32 19.32 3.67 3 1 1 0 766.6878 2218.0794 S604s TMT10 597 (K) NNDALHMsLESLICESR (D) NNDALHMS(0.99)LES(0.0)LICES(0.0)R C:Carbamidomethylation,s:Phosphorylated S MYO6 151234.9 1 4 1416.1 144.52 HUMAN 1 3.7712 12.7577 NNDILPNSQEELLYS-p Q86UW6;S1238-p NNDILPNSQEELLYS 0.192250320207502 0.603360256520903 -0.217333333333333 0.057 13.9777915610509 2.97676547039864 -0.217333333333333 0.057 0.0400148178128297 0.503875744625451 -2.6888418827258 0.715589150881241 Q86UW6 N4BP2 Q86UW6.S1238.p_N4BP2 Q86UW6_S1238s _1_1_1238_1238 Q86UW6 Q86UW6 NEDD4-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22597.22597.3 11.65 11.65 7.878 4 1 1 0 872.7708 2536.3295 S1238s TMT10 1230 (K) NNNDILPNsQEELLYSSK (Q) NNNDILPNS(0.99)QEELLY(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S N4BP2 200566.4 1 10 1216.1 165.62 HUMAN 1 -13.9778 2.9768 NNDNPLESNDEKEGQ-p P23497-4;S362-p NNDNPLESNDEKEGQ 0.882720104895207 0.0421320720435022 0.024 0.306666666666667 1.06872839287391 18.4299808889309 0.024 0.306666666666667 0.781856697436725 0.0143549575021912 0.291030468883963 3.54682234701065 P23497 SP100 P23497.4.S362.p_SP100 P23497-4_S362s _1_1_362_362 P23497-4 P23497-4|P23497-3|P23497-2|P23497-5 Isoform Sp100-C of Nuclear autoantigen Sp-100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20669.20669.5 19.43 16.34 4.425 4 1 1 0 1028.2959 5057.5188 S362s TMT10 350 (R) SEPVINNDNPLEsNDEKEGQEATCSRPQIVPEPMDFRK (L) S(0.0)EPVINNDNPLES(0.99)NDEKEGQEAT(0.0)CS(0.0)RPQIVPEPMDFRK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SP100 103285 2 8 542.1 276.37 HUMAN 1 1.0687 18.43 NNIFQQISPVVGDKQ-p Q9Y2X0;S326-p NNIFQQISPVVGDKQ 0.108049516126761 0.133460107802291 -0.307666666666667 -0.156333333333333 20.3536661885833 11.5301913476126 -0.307666666666667 -0.156333333333333 0.00921792947632854 0.0703041343610388 -3.95526539672048 -2.24819940208784 Q9Y2X0 MED16 Q9Y2X0.S326.p_MED16 Q9Y2X0_S326s _1_1_326_326 Q9Y2X0 Q9Y2X0|Q9Y2X0-3|Q9Y2X0-2|Q9Y2X0-4|Q9Y2X0-5|U3KQ43 Mediator of RNA polymerase II transcription subunit 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32492.32492.3 23.28 23.28 99 1 1 1 0 864.8027 2512.4175 S326s TMT10 314 (K) EGLPVNNIFQQIsPVVGDK (Q) EGLPVNNIFQQIS(1.0)PVVGDK K:TMT10,s:Phosphorylated S MED16 98503.1 6 1 3160.1 59.02 HUMAN 1 -20.3537 -11.5302 NNINRRLTPQAVKIR-p P05198;T185-p NNINRRLTPQAVKIR 0.830914313858331 0.216898472576598 -0.03 -0.148666666666667 1.54828021667572 8.73308768839621 -0.03 -0.148666666666667 0.700119184633716 0.133872456064902 -0.406267036338878 -1.76154680873897 P05198 EIF2S1 P05198.T185.p_EIF2S1 P05198_T185t _1_1_185_185 P05198 P05198 Eukaryotic translation initiation factor 2 subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10361.10361.3 8.66 5.88 99 1 1 1 0 484.29 1370.8884 T185t TMT10 183 (R) RLtPQAVK (I) RLT(1.0)PQAVK K:TMT10,t:Phosphorylated T EIF2S1 36396.8 2 4 2415.1 84.49 HUMAN 1 -1.5483 -8.7331 NNIRKALSFDNRGEE-p Q02156;S368-p NNIRKALSFDNRGEE 0.238865907808613 0.0366103631776353 0.309 -0.337 11.8945521334458 19.3267616420744 0.309 -0.337 0.0646464657284962 0.011676799841583 2.31364494810576 -3.73258898312495 Q02156 PRKCE Q02156.S368.p_PRKCE Q02156_S368s _1_1_368_368 Q02156 Q02156|E9PBI2 Protein kinase C epsilon type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7804.7804.3 10.99 7.4 99 1 1 1 0 580.6065 1659.84 S368s TMT10 366 (K) ALsFDNRGEEHR (A) ALS(1.0)FDNRGEEHR s:Phosphorylated S PRKCE 85041.6 2 5 1089.1 179.15 HUMAN 1 11.8946 -19.3268 NNKLVYGSRQDFLWR-p Q96TC7;S272-p NNKLVYGSRQDFLWR 0.498524164576527 0.0325020072368855 0.094 0.284 5.57004777656819 20.0800855088044 0.094 0.284 0.277328959563232 0.00981728613447564 1.20757287419469 3.89249769393698 Q96TC7 RMDN3 Q96TC7.S272.p_RMDN3 Q96TC7_S272s _1_1_272_272 Q96TC7 Q96TC7|Q96TC7-2 Regulator of microtubule dynamics protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23263.23263.3 16.85 13.51 7.24 2 1 1 0 616.9835 1768.9696 S272s TMT10 268 (K) LVYGsRQDFLWR (L) LVY(0.0)GS(0.99)RQDFLWR s:Phosphorylated S RMDN3 52573.8 2 3 697.1 241.25 HUMAN 1 5.57 20.0801 NNKPQRPSQNGCQIR-p Q96ST3;S421-p NNKPQRPSQNGCQIR 0.546236180544102 0.0128686511008283 -0.088 0.422666666666667 4.84775611244379 26.3322302533564 -0.088 0.422666666666667 0.327509867071403 0.0023268960086831 -1.07608334085354 5.38210872049132 Q96ST3 SIN3A Q96ST3.S421.p_SIN3A Q96ST3_S421s_1_1_421_421 Q96ST3 Q96ST3 Paired amphipathic helix protein Sin3a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8178.8178.4 8.43 8.43 6.396 1 1 1 0 758.6622 2950.6724 S421s N423n TMT10 410 (K) KPQLNNKPQRPsQnGCQIR (R) KPQLN(0.0)N(0.0)KPQRPS(1.0)QN(0.99)GCQIR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated SIN3A 145971.2 1 8 501.1 291.36 HUMAN 1 -4.8478 26.3322 NNKSVNESLNNLFIT-p Q00610-2;S1466-p NNKSVNESLNNLFIT 0.903152481449396 0.0720384418561393 -0.0316666666666667 -0.204 0.868188253087391 15.1811963667507 -0.0316666666666666 -0.204 0.818806298436761 0.0303305554229706 -0.24047998193943 -2.91057681134641 Q00610 CLTC Q00610.2.S1466.p_CLTC Q00610-2_S1466s _1_1_1466_1466 Q00610-2 A0A087WVQ6|Q00610|Q00610-2|J3KS13 Isoform 2 of Clathrin heavy chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28897.28897.3 17.07 17.07 3.64 4 1 1 0 888.7628 2584.3092 S1466s TMT10 1462 (K) SVNEsLNNLFITEEDYQALR (T) S(0.0)VNES(0.99)LNNLFIT(0.0)EEDY(0.0)QALR s:Phosphorylated S CLTC 189655.7 1 7 1116.1 175.54 HUMAN 1 -0.8682 -15.1812 NNKYPQNSDDEENEP-p O60673;S449-p NNKYPQNSDDEENEP 0.793335713775664 0.138254009635805 0.0416666666666667 -0.175 1.94046370600777 11.3217137424268 0.0416666666666667 -0.175 0.639666533198695 0.0737613107775959 0.495576558234299 -2.21153892169051 O60673 REV3L O60673.S449.p_REV3L O60673_S449s _1_1_449_449 O60673 O60673|O60673-2 DNA polymerase zeta catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26134.26134.5 32.48 27.36 7.503 5 1 1 0 957.2582 4702.2856 S449s TMT10 439 (R) SFGNNKYPQNsDDEENEPQIEKEEMELSLVMSQR (W) S(0.0)FGNNKY(0.0)PQNS(0.99)DDEENEPQIEKEEMELS(0.0)LVMS(0.0)QR K:TMT10,s:Phosphorylated S REV3L 356192.6 2 2 524.1 282.7 HUMAN 1 1.9405 -11.3217 NNKYSEGYPGKRYYG-p P34897;Y100-p NNKYSEGYPGKRYYG 0.140760843773736 0.00236864714219928 -0.851666666666667 0.899666666666667 17.4150710181688 40.3262785234427 -0.851666666666667 0.895564288272885 0.0181339702198521 9.2762436575287e-05 -3.3448390542796 10.2790985821554 P34897 SHMT2 P34897.Y100.p_SHMT2 P34897_Y100y _1_1_100_100 P34897 P34897|P34897-2|P34897-3|G3V540|G3V2E4 Serine hydroxymethyltransferase, mitochondrial GG20160819_MSz_CCLE_T4D7_pY_Injection_01.10072.10111.2 12.5 12.5 3.692 3 1 1 0 719.8528 1358.7356 Y100y TMT10 96 (K) YSEGyPGK (R) Y(0.0)S(0.0)EGY(0.99)PGK K:TMT10,y:Phosphorylated Y SHMT2 56448.4 2 1 284.1 12.5 HUMAN 1 -17.4151 40.3263 NNKYSEGYPGQRYYG-p P34896;Y77-p NNKYSEGYPGQRYYG 0.148892042645734 0.0146607193837045 -0.479666666666667 0.362333333333333 16.6871682799834 25.3981110226924 -0.479666666666667 0.362333333333333 0.0214428828061288 0.00288528619441253 -3.20127129151264 5.13877051127584 P34896 SHMT1 P34896.Y77.p_SHMT1 P34896_Y77y _1_1_77_77 P34896 P34896|P34896-2|P34896-3|J3KRK5 Serine hydroxymethyltransferase, cytosolic GG20160819_MSz_CCLE_T4D7_pY_Injection_01.6980.7055.2 15.67 15.67 3.247 3 1 1 0 683.3053 1285.6374 Y77y TMT10 73 (K) YSEGyPGQR (Y) Y(0.0)S(0.0)EGY(0.99)PGQR y:Phosphorylated Y SHMT1 53652.2 2 1 230.1 15.67 HUMAN 1 -16.6872 25.3981 NNLDDGASPGDRQSL-p Q13796;S1524-p NNLDDGASPGDRQSL 0.473500515356708 0.395606948961134 -0.096 0.088 5.97852529307776 5.35400384984467 -0.096 0.0880000000000001 0.25243378007449 0.291473861767361 -1.28073708131741 1.16830311259739 Q13796 SHROOM2 Q13796.S1524.p_SHROOM2 Q13796_S1524s _1_1_1524_1524 Q13796 Q13796|F5H3B6 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21803.21803.3 17.9 13.74 3.423 2 1 1 0 998.5026 2913.5318 S1524s TMT10 1512 (R) VENALNNLDDGAsPGDRQSLLEK (Q) VENALNNLDDGAS(0.99)PGDRQS(0.0)LLEK K:TMT10,s:Phosphorylated S SHROOM2 177605.1 3 26 90.1 622.62 HUMAN 1 -5.9785 5.354 NNLKRLDTLEFKQLI-p Q6PCB5;T342-p NNLKRLDTLEFKQLI 0.650219558698126 0.254170775402284 -0.062 0.119 3.50640934847646 7.83628402778036 -0.062 0.119 0.446024859568018 0.164577930604026 -0.821519584919033 1.60624867136497 Q6PCB5 RSBN1L Q6PCB5.T342.p_RSBN1L Q6PCB5_T342t _1_1_342_342 Q6PCB5 Q6PCB5|Q6PCB5-2 Round spermatid basic protein 1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17644.17644.3 9.77 9.77 99 1 1 1 0 520.6249 1479.8935 T342t TMT10 339 (K) RLDtLEFK (Q) RLDT(1.0)LEFK K:TMT10,t:Phosphorylated T RSBN1L 95438.4 1 3 1544.1 132.85 HUMAN 1 -3.5064 7.8363 NNLRRSNSTTQVSQP-p Q9UPN4-2;S78-p NNLRRSNSTTQVSQP 0.518846820664332 0.00714183859803134 0.0863333333333333 -0.498666666666667 5.26415095011294 30.7467909176496 0.0863333333333333 -0.498666666666667 0.297567094854958 0.000842017093854209 1.15225229929908 -6.65170319518102 Q9UPN4 CEP131 Q9UPN4.2.S78.p_CEP131 Q9UPN4-2_S78s _1_1_78_78 Q9UPN4-2 Q9UPN4|Q9UPN4-2|I3L2J8|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3557.3557.3 8.75 8.75 1.169 5 1 1 0 557.2792 1589.8557 S78s TMT10 75 (R) RSNsTTQVSQPR (S) RS(0.0)NS(0.99)T(0.0)T(0.0)QVS(0.0)QPR s:Phosphorylated S CEP131 122301.7 3 4 359.1 345.98 HUMAN 1 5.2642 -30.7468 NNLSRSNSDESNFSE-p O95999;S138-p NNLSRSNSDESNFSE 0.347222085693526 0.121209360276183 -0.145 0.225 8.53589967026868 12.0839037185574 -0.145 0.225 0.140090934707241 0.0618884531702728 -1.72802266559481 2.34604541831384 O95999 BCL10 O95999.S138.p_BCL10 O95999_S138s _1_1_138_138 O95999 O95999|A0A087WWW9 B-cell lymphoma/leukemia 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9572.9572.2 14.84 14.84 2.27 4 1 1 0 891.4017 1701.8332 S138s TMT10 136 (R) SNsDESNFSEK (L) S(0.0)NS(0.99)DES(0.0)NFS(0.0)EK K:TMT10,s:Phosphorylated S BCL10 26536.4 4 1 4611.1 28.82 HUMAN 1 -8.5359 12.0839 NNMNKSESDQEDNDD-p Q14CW9-2;S131-p NNMNKSESDQEDNDD 0.621899441424404 0.43499406711115 0.0653333333333333 0.130666666666667 3.83411449127319 4.8170399113088 0.0653333333333333 0.130666666666667 0.41360763866038 0.329834445992973 0.885284625213843 1.07021091226029 Q14CW9 ATXN7L3 Q14CW9.2.S131.p_ATXN7L3 Q14CW9-2_S131s _1_1_131_131 Q14CW9-2 Q14CW9-2 Isoform 2 of Ataxin-7-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17059.17059.4 24.76 21.2 2.346 6 1 1 0 1079.7261 4235.915 S131s TMT10 120 (R) IANSNNMNKSEsDQEDNDDINDNDWSYGSEK (K) IANS(0.0)NNMNKS(0.0)ES(0.99)DQEDNDDINDNDWS(0.0)Y(0.0)GS(0.0)EK K:TMT10,s:Phosphorylated S ATXN7L3 40169 7 1 1482.1 138.38 HUMAN 1 3.8341 4.817 NNMQEAQSIDEIYKY-p Q92905;S24-p NNMQEAQSIDEIYKY 0.660414873314641 0.0414794358216984 -0.079 0.287 3.37243560439097 18.5285204438864 -0.079 0.287 0.459998525483263 0.0140329169709182 -0.795094179609168 3.56699975096308 Q92905 COPS5 Q92905.S24.p_COPS5 Q92905_S24s _1_1_24_24 Q92905 Q92905|E5RK55|E5RG35|E5RFS1 COP9 signalosome complex subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26992.26992.4 18.87 18.87 11.508 4 1 1 0 864.9308 3376.7338 S24s TMT10 12 (K) TWELANNMQEAQsIDEIYKYDK (K) T(0.0)WELANNMQEAQS(0.99)IDEIY(0.0)KY(0.0)DK K:TMT10,s:Phosphorylated S COPS5 37806.4 2 1 2859.1 67.95 HUMAN 1 -3.3724 18.5285 NNNKKDHSDSDDQML-p Q9NW75;S115-p NNNKKDHSDSDDQML 0.235621777934373 0.927601724721068 -0.210666666666667 0.00966666666666671 12.0267021133781 0.459809520281858 -0.210666666666667 0.00966666666666672 0.062708987493314 0.899537033977708 -2.33707167658707 0.132274908320384 Q9NW75 GPATCH2 Q9NW75.S115.p_GPATCH2 Q9NW75_S115sS117s_2_2_115_117 Q9NW75 Q9NW75|Q9NW75-2 G patch domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10133.10133.4 12.65 8.46 99 2 2 2 0 613.7906 2276.216 S115s S117s M121m TMT10 112 (K) KDHsDsDDQmLVAK (R) KDHS(1.0)DS(1.0)DDQM(1.0)LVAK K:TMT10,s:Phosphorylated S,m:Oxidized methionine GPATCH2 59341.9 15 8 1558.1 131.71 HUMAN 1 -12.0267 0.4598 NNNPGSITPTVELNG-p Q9NUL3;T95-p NNNPGSITPTVELNG 0.687777093309933 0.117274103450566 0.056 -0.174333333333333 3.05220800166423 12.2727911681283 0.056 -0.174333333333333 0.495198362414354 0.0592544379705076 0.730996528406039 -2.37959646222197 Q9NUL3 STAU2 Q9NUL3.T95.p_STAU2 Q9NUL3_T95t _1_1_95_95 Q9NUL3 Q9NUL3|A0A0A0MTC5|Q9NUL3-2|E9PH62|E7EVJ4|E7EPX0|Q9NUL3-3|F8VPI7|Q9NUL3-8 Double-stranded RNA-binding protein Staufen homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25246.25246.3 18.06 18.06 1.774 4 1 1 0 936.8189 2728.4704 T95t TMT10 85 (K) SNVNNNPGSItPTVELNGLAMK (R) S(0.0)NVNNNPGS(0.0)IT(0.99)PT(0.0)VELNGLAMK K:TMT10,t:Phosphorylated T STAU2 62867.6 2 1 1170.1 170.28 HUMAN 1 3.0522 -12.2728 NNQIRRWSSAQAREF-p Q9UPU5;S2330-p NNQIRRWSSAQAREF 0.974387172364495 0.964913117878029 0.00499999999999999 -0.0103333333333333 0.22008120333134 0.221960367682169 0.00499999999999999 -0.0103333333333333 0.95058701964404 0.950175795714758 0.0648957991039768 -0.0654307896489601 Q9UPU5 USP24 Q9UPU5.S2330.p_USP24 Q9UPU5_S2330s _1_1_2330_2330 Q9UPU5 Q9UPU5 Ubiquitin carboxyl-terminal hydrolase 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4746.4746.3 10.28 10.28 1.149 2 1 1 0 424.2137 1190.6592 S2330s TMT10 2328 (R) RWsSAQAR (E) RWS(0.99)S(0.0)AQAR s:Phosphorylated S USP24 297383.8 2 135 8.4 1346.57 HUMAN 1 0.2201 -0.222 NNRLFVGSIPKSKTK-p O60506;S249-p NNRLFVGSIPKSKTK 0.306735184126758 0.348128303451669 -0.161 -0.098 9.60412315140469 6.07348402626803 -0.161 -0.098 0.10954377039403 0.246974205707296 -1.91300744425262 -1.29733141816425 O60506 SYNCRIP O60506.S249.p_SYNCRIP O60506_S249s _1_1_249_249 O60506 O43390-2|O60506|O43390-3|O60506-2|O60506-3|O43390-4|O60506-4|B4DT28|B7Z645|O60506-5 Heterogeneous nuclear ribonucleoprotein Q HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25795.25795.2 12.1 12.1 99 1 1 1 0 699.9121 1318.8499 S249s TMT10 245 (R) LFVGsIPK (S) LFVGS(1.0)IPK K:TMT10,s:Phosphorylated S SYNCRIP 69829.6 2 12 1376.1 148.68 HUMAN 1 -9.6041 -6.0735 NNRPAFFSPSLKRKV-p Q6ICG6-2;S309-p NNRPAFFSPSLKRKV 0.996516649274227 0.511235270124185 0.000666666666666658 -0.133666666666667 0.0267866188958649 3.90786029451288 0.000666666666666659 -0.133666666666667 0.993851135185456 0.40664362719562 0.00806891420960583 -0.899325793606232 Q6ICG6 KIAA0930 Q6ICG6.2.S309.p_KIAA0930 Q6ICG6-2_S309s _1_1_309_309 Q6ICG6-2 Q6ICG6-2|Q6ICG6-3 Isoform 2 of Uncharacterized protein KIAA0930 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18318.18318.3 14.4 12.18 1.538 2 1 1 0 639.3453 1836.0532 S309s TMT10 302 (R) NNRPAFFsPSLK (R) NNRPAFFS(0.99)PS(0.0)LK K:TMT10,s:Phosphorylated S KIAA0930 46582.9 8 2 1552.1 132.36 HUMAN 1 0.0268 -3.9079 NNSFQRLSP______-p Q5HYI7;S311-p NNSFQRLSP______ 0.357452344407667 0.106602341179321 0.169666666666667 0.188 8.30316475703529 12.8433789101743 0.169666666666667 0.188 0.147803093640937 0.0519591585123062 1.68771491304341 2.48154062071431 Q5HYI7 MTX3 Q5HYI7.S311.p_MTX3 Q5HYI7_S311s _1_1_311_311 Q5HYI7 Q5HYI7|Q5HYI7-5 Metaxin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18759.18759.3 15.19 15.19 1.678 3 1 1 0 714.3434 2061.045 S311s TMT10 297 (K) LTPAEEENNSFQRLsP (-) LT(0.0)PAEEENNS(0.0)FQRLS(0.99)P s:Phosphorylated S MTX3 35320.9 5 3 3123.1 60.2 HUMAN 1 8.3032 12.8434 NNSGEAPSSPTPKRS-p P49916;S241-p NNSGEAPSSPTPKRS 0.763105993345215 0.00780320007241157 0.047 -0.456666666666667 2.24972216815119 30.078811683089 0.047 -0.456666666666667 0.595700251130003 0.000982016605725274 0.563421120455958 -6.44588558293943 P49916 LIG3 P49916.S241.p_LIG3 P49916_S241s_1_1_241_241 P49916 P49916|P49916-2|P49916-3|P49916-4 DNA ligase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16928.16928.3 15.38 12.8 1.083 6 1 1 0 959.1534 2794.4979 N235n S241s TMT10 226 (K) FSGFSAKPNnSGEAPsSPTPK (R) FS(0.0)GFS(0.0)AKPN(0.50)N(0.50)S(0.0)GEAPS(0.99)S(0.0)PT(0.0)PK K:TMT10,n:Deamidated,s:Phosphorylated S LIG3 114388.3 39 3 649.1 254.3 HUMAN 1 2.2497 -30.0788 NNSLPCGSPKKCNLK-p Q5THK1;S1029-p NNSLPCGSPKKCNLK 0.315689954032061 0.0074845512145942 -0.144666666666667 -0.559666666666667 9.37145195803238 30.3999886054647 -0.144666666666667 -0.559666666666667 0.115572578877084 0.000912013232191595 -1.87268447713865 -6.54419465584722 Q5THK1 PRR14L Q5THK1.S1029.p_PRR14L Q5THK1_S1029s _1_1_1029_1029 Q5THK1 Q5THK1|Q5THK1-4|Q5THK1-2|Q5THK1-3 Protein PRR14L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17564.17564.4 20.94 16.71 3.298 5 1 1 0 682.6141 2647.4692 S1029s TMT10 1014 (K) DLLVSSGSNNSLPCGsPKK (C) DLLVS(0.0)S(0.0)GS(0.0)NNS(0.0)LPCGS(0.99)PKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRR14L 241289.3 7 6 1413.1 145.23 HUMAN 1 -9.3715 -30.4 NNSSPRDSPCKENKI-p A3KN83;S697-p NNSSPRDSPCKENKI 0.0211572678163944 0.00523645679825525 -0.814666666666667 -1.01733333333333 38.969678396802 33.1750245667005 -0.814666666666667 -1.01733333333333 0.000126774574132856 0.000481390530914555 -9.69911619990738 -7.44591958434589 A3KN83 SBNO1 A3KN83.S697.p_SBNO1 A3KN83_S697s _1_1_697_697 A3KN83 A3KN83|A3KN83-2|A3KN83-3|A3KN83-4 Protein strawberry notch homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.31011.31011.5 21.21 21.21 1.886 7 1 1 0 629.5225 3063.6185 S697s TMT10 677 (K) LYSLLGIDLTAPSNNSSPRDsPCK (E) LY(0.0)S(0.0)LLGIDLT(0.0)APS(0.0)NNS(0.0)S(0.0)PRDS(0.99)PCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SBNO1 154994.1 1 3 861.1 210.54 HUMAN 1 -38.9697 -33.175 NNSSPSISPNTSFTS-p Q9H0D6;S475-p NNSSPSISPNTSFTS 0.659595024833796 0.0715513637789286 -0.06 -0.218 3.3890612235258 15.224418789791 -0.06 -0.218 0.45824092995157 0.0300301928382577 -0.798385427176443 -2.91870840526456 Q9H0D6 XRN2 Q9H0D6.S475.p_XRN2 Q9H0D6_S473sS475s_2_2_473_475 Q9H0D6 Q9H0D6|Q9H0D6-2 5'-3' exoribonuclease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20964.20964.4 11.41 11.41 1.186 10 2 2 0 900.4233 3421.7422 M466m S473s S475s N477n TMT10 466 (R) mQNNSSPsIsPnTSFTSDGSPSPLGGIKR (K) M(1.0)QN(0.0)N(0.0)S(0.0)S(0.0)PS(0.99)IS(0.99)PN(0.99)T(0.0)S(0.0)FT(0.0)S(0.0)DGS(0.0)PS(0.0)PLGGIKR K:TMT10,m:Oxidized methionine,s:Phosphorylated S,n:Deamidated XRN2 109493.4 15 11 608.1 262.16 HUMAN 1 -3.3891 -15.2244 NNSVSGLSVKSKNNT-p Q9UHI6;S505-p NNSVSGLSVKSKNNT 0.846310224402611 0.130848442592865 0.0293333333333333 -0.188666666666667 1.40279465916246 11.6404490734757 0.0293333333333333 -0.188666666666667 0.723969939799803 0.0685417348585624 0.372071815191873 -2.26762601209458 Q9UHI6 DDX20 Q9UHI6.S505.p_DDX20 Q9UHI6_S505s _1_1_505_505 Q9UHI6 Q9UHI6|E9PJ60 Probable ATP-dependent RNA helicase DDX20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13115.13115.3 8.87 8.87 3.442 3 1 1 0 514.9484 1462.863 S505s TMT10 498 (R) NNSVSGLsVK (S) NNS(0.0)VS(0.0)GLS(0.99)VK K:TMT10,s:Phosphorylated S DDX20 93037.6 1 5 610.1 261.86 HUMAN 1 1.4028 -11.6404 NNVPSVPSPSIQRNP-p Q6VMQ6-4;S860-p NNVPSVPSPSIQRNP 0.540088410971781 0.147001334085503 -0.0836666666666667 -0.361 4.93870481494841 10.9647477473347 -0.0836666666666667 -0.361 0.320722566439955 0.0800802140405027 -1.09281336769512 -2.14896932093574 Q6VMQ6 ATF7IP Q6VMQ6.4.S860.p_ATF7IP Q6VMQ6-4_S860s _1_1_860_860 Q6VMQ6-4 Q6VMQ6-4|Q6VMQ6-5|Q6VMQ6-2 Isoform 3 of Activating transcription factor 7-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24159.24159.5 17.17 17.17 1.781 6 1 1 0 675.7713 3294.8574 S860s TMT10 839 (K) NPVSLPSLPNPTKPNNVPSVPsPSIQR (N) NPVS(0.0)LPS(0.0)LPNPT(0.0)KPNNVPS(0.0)VPS(0.99)PS(0.0)IQR K:TMT10,s:Phosphorylated S ATF7IP 138346.3 2 14 273.1 392.91 HUMAN 1 -4.9387 -10.9647 NNVSLLQSCIDLFKN-p Q9Y5X3;S396-p NNVSLLQSCIDLFKN 0.284041122323892 0.0270663127808541 0.161666666666667 0.301333333333333 10.312132848739 21.2718627738067 0.161666666666667 0.301333333333333 0.093065071453825 0.00746128660619992 2.03599462310319 4.15317372562451 Q9Y5X3 SNX5 Q9Y5X3.S396.p_SNX5 Q9Y5X3_S396s _1_1_396_396 Q9Y5X3 Q9Y5X3 Sorting nexin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31966.31966.3 19.06 17.07 9.03 2 1 1 0 730.3879 2109.1778 S396s TMT10 389 (R) NNVSLLQsCIDLFK (N) NNVS(0.0)LLQS(0.99)CIDLFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SNX5 47100.9 1 5 2397.1 85.28 HUMAN 1 10.3121 21.2719 NPALKCLSPGGHPTY-p Q8NFF5;S563-p NPALKCLSPGGHPTY 0.353670778447798 0.368669377725737 0.278 0.109666666666667 8.38798599550672 5.74699038397183 0.278 0.109666666666667 0.144944386523484 0.266256955389423 1.70240809435118 1.23907465771627 Q8NFF5 FLAD1 Q8NFF5.S563.p_FLAD1 Q8NFF5_S563s _1_1_563_563 Q8NFF5 Q8NFF5|Q8NFF5-2|Q5T190 FAD synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14265.14265.5 17.74 11.78 16.146 5 1 1 0 677.5206 3303.6014 S563s TMT10 561 (K) CLsPGGHPTYRPAYLLENEEEERNSR (T) CLS(0.99)PGGHPT(0.0)Y(0.0)RPAY(0.0)LLENEEEERNS(0.0)R C:Carbamidomethylation,s:Phosphorylated S FLAD1 66006.1 4 2 2941.1 65.29 HUMAN 1 8.388 5.747 NPDIVNQSQQAQARE-p O95376;S353-p NPDIVNQSQQAQARE 0.451306235678188 0.00714231278100688 0.121333333333333 -0.486 6.38005265546834 30.7245439112023 0.121333333333333 -0.486 0.230141391404635 0.000846341445502744 1.35199583452817 -6.64476393301381 O95376 ARIH2 O95376.S353.p_ARIH2 O95376_S353s _1_1_353_353 O95376 O95376 E3 ubiquitin-protein ligase ARIH2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9593.9593.3 20.66 14.95 20.662 2 1 1 0 843.0959 2447.3043 S353s TMT10 343 (R) YKENPDIVNQsQQAQAR (E) Y(0.0)KENPDIVNQS(0.99)QQAQAR K:TMT10,s:Phosphorylated S ARIH2 59415.4 1 1 5316.1 20.66 HUMAN 1 6.3801 -30.7245 NPDLVRAYGPGLEKS-p O75369-8;Y651-p NPDLVRAYGPGLEKS 0.932405226886258 0.367793775134661 0.0136666666666667 0.0896666666666667 0.602566773761133 5.76082229693029 0.0136666666666667 0.0896666666666667 0.870448983835366 0.265410298424197 0.170982930331897 1.24155202145843 O75369 FLNB O75369.8.Y651.p_FLNB O75369-8_Y651y _1_1_651_651 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|O75369-4|O75369-5 Isoform 8 of Filamin-B GG20160819_MSz_CCLE_T4D7_pY_Injection_02.13749.13800.2 13.86 5.66 99 1 1 1 0 686.8684 1292.7615 Y651y TMT10 650 (R) AyGPGLEK (S) AY(1.0)GPGLEK K:TMT10,y:Phosphorylated Y FLNB 283797.6 2 1 37.1 53.72 HUMAN 1 0.6026 5.7608 NPDPAPLSPELQDFK-p Q9UHF7-2;S229-p NPDPAPLSPELQDFK 0.300240588687515 0.905226394779529 -0.145333333333333 -0.012 9.8233522632591 0.603477085873918 -0.145868994206407 -0.012 0.104151318840447 0.870266550659699 -1.95103642789773 -0.171210400667436 Q9UHF7 TRPS1 Q9UHF7.2.S229.p_TRPS1 Q9UHF7-2_S229s _1_1_229_229 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3|E5RJ97 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27120.27328.3 26.16 26.16 26.155 3 1 1 0 1140.936 3340.8244 S229s TMT10 213 (K) SKTDLLVNDNPDPAPLsPELQDFK (C) S(0.0)KT(0.0)DLLVNDNPDPAPLS(0.99)PELQDFK K:TMT10,s:Phosphorylated S TRPS1 145246 22 10 14.1 1150.14 HUMAN 1 -9.8234 -0.6035 NPDSVSNTPEMEQRE-p O15381;T138-p NPDSVSNTPEMEQRE 0.321360955335002 0.209461515579807 0.286666666666667 -0.258666666666667 9.22702248695494 8.93130507190903 0.286666666666667 -0.258666666666667 0.119480698065839 0.127899690283024 1.84766889968918 -1.79583073214843 O15381 NVL O15381.T138.p_NVL O15381_T138t _1_1_138_138 O15381 O15381|O15381-2|E9PH71 Nuclear valosin-containing protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6881.6881.3 11.21 11.21 2.498 3 1 1 0 776.3744 2247.144 T138t TMT10 129 (R) KGNPDSVSNtPEMEQR (E) KGNPDS(0.0)VS(0.0)NT(0.99)PEMEQR K:TMT10,t:Phosphorylated T NVL 96076.2 1 1 2878.1 67.49 HUMAN 1 9.227 -8.9313 NPEDRSPSPEPIYNS-p Q15637-6;S82-p NPEDRSPSPEPIYNS 0.0973600331101722 0.0822101506802639 -0.370333333333333 0.310333333333333 21.4384887496467 14.3783369763038 -0.370333333333333 0.310333333333333 0.0071804411153872 0.036489364720671 -4.19469354422568 2.76093962576921 Q15637 SF1 Q15637.6.S82.p_SF1 Q15637-6_S80sS82s_2_2_80_82 Q15637-6 Q15637-5|Q15637-2|Q15637-3|Q15637-7|Q15637-6|Q15637-4 Isoform 6 of Splicing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19561.19561.5 16.74 12.07 4.595 5 2 2 0 631.8898 2995.4846 S80s S82s Hydrogen 67 (R) TGDLGIPPNPEDRsPsPEPIYNSEGK (R) T(0.0)GDLGIPPNPEDRS(0.99)PS(0.99)PEPIY(0.0)NS(0.0)EGK K:TMT10-Lys-Only,s:Phosphorylated S SF1 62173.2 58 11 1138.1 173.35 HUMAN 1 -21.4385 14.3783 NPEKYQESPGIQMKT-p Q9UHI6;S714-p NPEKYQESPGIQMKT 0.28816497283467 0.00287163181604281 -0.215333333333333 -0.677666666666667 10.1912482957286 38.441501229395 -0.215333333333333 -0.677666666666667 0.0956918983856027 0.000143169291923063 -2.01495728434083 -9.45199413098961 Q9UHI6 DDX20 Q9UHI6.S714.p_DDX20 Q9UHI6_S714s _1_1_714_714 Q9UHI6 Q9UHI6 Probable ATP-dependent RNA helicase DDX20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21627.21627.4 17.84 17.84 1.333 5 1 1 0 938.7255 3671.9194 S714s TMT10 694 (R) ISLEQPPNGSDTPNPEKYQEsPGIQMK (T) IS(0.0)LEQPPNGS(0.0)DT(0.0)PNPEKY(0.0)QES(0.99)PGIQMK K:TMT10,s:Phosphorylated S DDX20 93037.6 8 12 610.1 261.86 HUMAN 1 -10.1912 -38.4415 NPELLPKTPISPLKT-p Q9NQW6;T320-p NPELLPKTPISPLKT 0.216205013250371 0.00615440935818188 -0.238333333333333 -0.785666666666667 12.8174802300318 31.8610850868113 -0.238333333333333 -0.785666666666667 0.0522699370416385 0.000651465604736607 -2.47822926966058 -7.00694118250842 Q9NQW6 ANLN Q9NQW6.T320.p_ANLN Q9NQW6_T320tS323s_2_2_320_323 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23176.23176.3 11.6 11.6 8.263 3 2 2 0 985.8473 2795.5944 T320t S323s TMT10 308 (K) SCEGQNPELLPKtPIsPLK (T) S(0.0)CEGQNPELLPKT(0.99)PIS(0.99)PLK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S ANLN 125566 3 50 68.1 675.08 HUMAN 1 -12.8175 -31.8611 NPENSKLSDLDSETR-p Q9Y266;S277-p NPENSKLSDLDSETR 0.236629786576391 0.0960807616538465 -0.23 -0.192 11.9932079054175 13.453283907821 -0.23 -0.192 0.0631944894410485 0.0451514403676905 -2.33112990994373 -2.59159449497542 Q9Y266 NUDC Q9Y266.S277.p_NUDC Q9Y266_S277s _1_1_277_277 Q9Y266 Q9Y266 Nuclear migration protein nudC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14747.14747.4 13.11 13.11 1.218 4 1 1 0 679.1152 2633.4713 S277s TMT10 268 (K) KINPENSKLsDLDSETR (S) KINPENS(0.0)KLS(0.99)DLDS(0.0)ET(0.0)R K:TMT10,s:Phosphorylated S NUDC 38299.3 2 7 739.1 234.62 HUMAN 1 -11.9932 -13.4533 NPEQNRLSECEEQAK-p Q7KZF4;S150-p NPEQNRLSECEEQAK 0.3249226720879 0.00553211891335055 -0.137333333333333 -0.559666666666667 9.14622649066537 32.7235620579162 -0.137333333333333 -0.559666666666667 0.121724318275939 0.000534126092595334 -1.83367844064151 -7.29255924796636 Q7KZF4 SND1 Q7KZF4.S150.p_SND1 Q7KZF4_S150s _1_1_150_150 Q7KZF4 Q7KZF4 Staphylococcal nuclease domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8469.8469.3 16.22 16.22 99 1 1 1 0 852.4034 2475.2298 S150s TMT10 141 (R) ANNPEQNRLsECEEQAK (A) ANNPEQNRLS(1.0)ECEEQAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SND1 102679.8 2 2 1505.1 135.67 HUMAN 1 -9.1462 -32.7236 NPESERNSPDVSYER-p Q8WW38;S904-p NPESERNSPDVSYER 0.69203351135124 0.647531431687714 0.0766666666666667 -0.044 2.99764249757497 2.57318651677559 0.0766666666666667 -0.044 0.501459369452001 0.552944252644729 0.719933422744033 -0.632221745008426 Q8WW38 ZFPM2 Q8WW38.S904.p_ZFPM2 Q8WW38_S904s _1_1_904_904 Q8WW38 Q8WW38|Q8WW38-2|E7ET52 Zinc finger protein ZFPM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14518.14518.3 13.87 10.98 2.354 4 1 1 0 811.0434 2351.1465 S904s TMT10 894 (K) VFPNPESERNsPDVSYER (S) VFPNPES(0.0)ERNS(0.99)PDVS(0.0)Y(0.0)ER s:Phosphorylated S ZFPM2 130381.7 2 8 1154.1 171.84 HUMAN 1 2.9976 -2.5732 NPETVNLSI______-p A0A087X211;S905-p NPETVNLSI______ 0.360295589006842 0.00582129521226572 -0.142 -0.523666666666667 8.24217837692274 32.3082527689539 -0.142 -0.523666666666667 0.149893279747437 0.00058772575575166 -1.67714802970823 -7.153835217036 A0A087X211 NotFound A0A087X211.S905.p_NotFound A0A087X211_S905s _1_1_905_905 A0A087X211 A0A087X211 Cell proliferation-regulating inhibitor of protein phosphatase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27890.27890.2 7.9 7.9 6.754 2 1 1 0 704.868 1328.7623 S905s TMT10 897 (K) INPETVNLsI (-) INPET(0.0)VNLS(0.99)I s:Phosphorylated S CIP2A 103478.4 1 3 3778.1 43.31 HUMAN 1 -8.2422 -32.3083 NPFCPEPSPPQDPFL-p Q99835;S742-p NPFCPEPSPPQDPFL 0.275371584336911 0.673435644326706 0.160333333333333 -0.096 10.6011434753777 2.34877661328182 0.160333333333333 -0.096 0.087073429984029 0.582267216552151 2.08637114309821 -0.584654573653725 Q99835 SMO Q99835.S742.p_SMO Q99835_S742s _1_1_742_742 Q99835 Q99835 Smoothened homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35237.35237.4 17.47 17.47 3.693 4 1 1 0 1048.5089 4111.0486 S742s TMT10 727 (R) QGAWTLVSNPFCPEPsPPQDPFLPSAPAPVAWAHGR (R) QGAWT(0.0)LVS(0.0)NPFCPEPS(0.99)PPQDPFLPS(0.0)APAPVAWAHGR C:Carbamidomethylation,s:Phosphorylated S SMO 87878.7 1 2 2012.1 102.4 HUMAN 1 10.6011 -2.3488 NPFIQPDSPAPNPFS-p Q9H1K0;S684-p NPFIQPDSPAPNPFS 0.308184669593711 0.0416527948713313 -0.196 0.258 9.55438709282065 18.5014714411082 -0.196 0.258 0.110805493091211 0.0141205904124959 -1.90438505395636 3.5614554220162 Q9H1K0 RBSN Q9H1K0.S684.p_RBSN Q9H1K0_S684s_1_1_684_684 Q9H1K0 Q9H1K0 Rabenosyn-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28804.28804.4 27.62 24.55 5.618 3 1 1 0 1264.0431 4972.1819 N677n S684s TMT10 660 (K) EYNPFEEEDEEEEAVAGnPFIQPDsPAPNPFSEEDEHPQQR (L) EY(0.0)N(0.0)PFEEEDEEEEAVAGN(0.99)PFIQPDS(0.99)PAPN(0.0)PFS(0.0)EEDEHPQQR n:Deamidated,s:Phosphorylated S RBSN 89666.9 2 8 972.1 193.2 HUMAN 1 -9.5544 18.5015 NPFNRKPSPAASPAT-p Q8N3F8;S640-p NPFNRKPSPAASPAT 0.33858729110699 0.841685612725582 0.162333333333333 -0.026 8.74952762381055 1.0522146211225 0.162333333333333 -0.026 0.133366648536067 0.78483531727202 1.76500582498659 -0.286896654538903 Q8N3F8 MICALL1 Q8N3F8.S640.p_MICALL1 Q8N3F8_S640s _1_1_640_640 Q8N3F8 Q8N3F8 MICAL-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11821.11821.4 12.23 9.79 1.451 3 1 1 0 645.6042 2499.4287 S640s TMT10 632 (K) ENPFNRKPsPAASPATK (K) ENPFNRKPS(0.99)PAAS(0.0)PAT(0.0)K K:TMT10,s:Phosphorylated S MICALL1 94409.4 7 10 755.1 231.25 HUMAN 1 8.7495 -1.0522 NPFPELCSPPSQSPI-p Q14451;S76-p NPFPELCSPPSQSPI 0.731147495586316 0.708334710064715 -0.0483333333333333 -0.048 2.58099755980774 2.05891542042532 -0.0483333333333333 -0.048 0.551950643513938 0.62245571391409 -0.633943035749926 -0.521748869613124 Q14451 GRB7 Q14451.S76.p_GRB7 Q14451_S76s _1_1_76_76 Q14451 Q14451-3|Q14451-2 Growth factor receptor-bound protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34011.34011.3 15.75 15.75 4.203 8 1 1 0 1157.5811 3390.7565 S76s TMT10 61 (R) ATSLPSIPNPFPELCsPPSQSPILGGPSSAR (G) AT(0.0)S(0.0)LPS(0.0)IPNPFPELCS(0.99)PPS(0.0)QS(0.0)PILGGPS(0.0)S(0.0)AR C:Carbamidomethylation,s:Phosphorylated S GRB7 60535.8 2 3 1698.1 120.33 HUMAN 1 -2.581 -2.0589 NPFSLGESFGSRWDT-p Q8N6H7;S368-p NPFSLGESFGSRWDT 0.229977783899196 0.392638966225606 -0.224666666666667 -0.105 12.2660977814124 5.39702419386228 -0.224666666666667 -0.105 0.0593458318687244 0.288600833221385 -2.37962377159394 -1.17608889416137 Q8N6H7 ARFGAP2 Q8N6H7.S368.p_ARFGAP2 Q8N6H7_S368s _1_1_368_368 Q8N6H7 Q8N6H7|G5E9L0|Q8N6H7-2 ADP-ribosylation factor GTPase-activating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22918.22918.3 16.35 10.47 2.14 3 1 1 0 574.5958 1641.807 S368s TMT10 360 (K) DNPFSLGEsFGSR (W) DNPFS(0.0)LGES(0.99)FGS(0.0)R s:Phosphorylated S ARFGAP2 57061.7 7 8 866.1 210.19 HUMAN 1 -12.2661 -5.397 NPFYEPNSPIRSSAF-p P0DI82;S119-p NPFYEPNSPIRSSAF 0.797960266528336 0.27466814158251 -0.048 0.114666666666667 1.89219696063712 7.39493585863717 -0.048 0.114666666666667 0.64681532922653 0.182182397958386 -0.484793683431111 1.52953602883842 P0DI82 TRAPPC2 P0DI82.S119.p_TRAPPC2 P0DI82_S119s _1_1_119_119 P0DI82 P0DI81-3|P0DI82 Trafficking protein particle complex subunit 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27307.27307.3 16.73 14.7 3.675 3 1 1 0 669.9798 1927.9574 S119s TMT10 109 (K) FSMNPFYEPNsPIR (S) FS(0.0)MNPFY(0.0)EPNS(0.99)PIR s:Phosphorylated S TRAPPC2B 16444.4 3 1 5053.1 23.5 HUMAN 1 -1.8922 7.3949 NPFYIKSSPSPQKRY-p O14617-5;S686-p NPFYIKSSPSPQKRY 0.114050912851162 0.00143419657753005 -0.325333333333333 -1.056 19.6468408346745 45.8864326880489 -0.325333333333333 -1.056 0.0108471567607753 2.57843822669683e-05 -3.80356518563787 -13.1245705122544 O14617 AP3D1 O14617.5.S686.p_AP3D1 O14617-5_S686sS688s_2_2_686_688 O14617-5 O14617-5|O14617-2|O14617-4|O14617-3 Isoform 5 of AP-3 complex subunit delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16892.16892.3 8.5 8.5 1.133 4 2 2 0 1089.9033 3107.7659 S686s S688s TMT10 673 (R) KQEQANNPFYIKSsPsPQK (R) KQEQANNPFY(0.0)IKS(0.0)S(0.99)PS(0.99)PQK K:TMT10,s:Phosphorylated S AP3D1 137789.5 6 11 513.1 286.98 HUMAN 1 -19.6468 -45.8864 NPGGRPITPPRNSAK-p P62136;T320-p NPGGRPITPPRNSAK 0.902006058729547 0.467802118523081 -0.0206666666666667 -0.0716666666666666 0.880386943452309 4.39808424420391 -0.0206666666666667 -0.0716666666666667 0.816509619541702 0.363238250755489 -0.243599633753203 -0.992318530161945 P62136 PPP1CA P62136.T320.p_PPP1CA P62136_T320t _1_1_320_320 P62136 P62136-2|P62136-3 Serine/threonine-protein phosphatase PP1-alpha catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15156.15365.5 16.63 16.63 1.986 4 1 1 0 571.305 2772.531 T320t TMT10 306 (K) YGQFSGLNPGGRPItPPRNSAK (A) Y(0.0)GQFS(0.0)GLNPGGRPIT(0.99)PPRNS(0.0)AK K:TMT10,t:Phosphorylated T PPP1CA 38253.1 13 7 1839.1 111.78 HUMAN 1 -0.8804 -4.3981 NPGNPRLSPLPSLMV-p Q9H6U6;S518-p NPGNPRLSPLPSLMV 0.567448794445481 0.00184815994780058 -0.127333333333333 0.990666666666667 4.53146034548689 42.9511072857763 -0.127333333333333 0.990666666666667 0.352252403798192 5.06861461401049e-05 -1.01745010681376 11.5418126960056 Q9H6U6 BCAS3 Q9H6U6.S518.p_BCAS3 Q9H6U6_S518s _1_1_518_518 Q9H6U6 Q9H6U6-8|Q9H6U6-3|Q9H6U6-7|Q9H6U6-2|K7ESE9 Breast carcinoma-amplified sequence 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.36908.36908.4 23.71 18.57 1.326 6 1 1 0 1131.3296 4442.3365 S518s TMT10 498 (K) LNSQDSYNNFTNNNPGNPRLsPLPSLMVVMPLAQIK (Q) LNS(0.0)QDS(0.0)Y(0.0)NNFT(0.0)NNNPGNPRLS(0.99)PLPS(0.0)LMVVMPLAQIK K:TMT10,s:Phosphorylated S BCAS3 102547.1 2 5 847.1 212.9 HUMAN 1 -4.5315 42.9511 NPGNQAAYEHFETMK-p P18206;Y692-p NPGNQAAYEHFETMK 0.0635108641161859 0.428364362401158 -0.557 0.083 25.9884899298213 4.90213221482919 -0.557 0.083 0.00251855249262339 0.323434824184554 -5.29856671239735 1.08587659327675 P18206 VCL P18206.Y692.p_VCL P18206_Y692y _1_1_692_692 P18206 P18206|P18206-2 Vinculin GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12899.12899.2 23.28 23.28 6.775 2 1 1 0 1023.4544 1965.9326 Y692y Hydrogen 685 (R) NPGNQAAyEHFETMK (N) NPGNQAAY(0.99)EHFET(0.0)MK K:TMT10-Lys-Only,y:Phosphorylated Y VCL 124367.7 17 1 16.1 85.81 HUMAN 1 -25.9885 4.9021 NPGSITPTVELNGLA-p Q9NUL3;T97-p NPGSITPTVELNGLA 0.473498904022036 0.667530963352738 0.117666666666667 0.0423333333333334 5.97887906026265 2.402100232199 0.117666666666667 0.0423333333333334 0.252413218185182 0.575161723969166 1.28080013294758 0.596042461691973 Q9NUL3 STAU2 Q9NUL3.T97.p_STAU2 Q9NUL3_T97t _1_1_97_97 Q9NUL3 Q9NUL3|A0A0A0MTC5|Q9NUL3-2|E9PH62|E7EVJ4|E7EPX0|Q9NUL3-3|F8VPI7|Q9NUL3-8|A0A0A0MTD1|E7EVI1|E5RGT3 Double-stranded RNA-binding protein Staufen homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25969.25969.3 7.73 7.73 1.303 4 1 1 0 936.8187 2728.4704 T97t TMT10 85 (K) SNVNNNPGSITPtVELNGLAMK (R) S(0.0)NVNNNPGS(0.0)IT(0.0)PT(0.99)VELNGLAMK K:TMT10,t:Phosphorylated T STAU2 62867.6 1 2 1170.1 170.28 HUMAN 1 5.9789 2.4021 NPGVTEVSPEFLAAL-p Q7Z6Z7;S3018-p NPGVTEVSPEFLAAL 0.365482939903865 0.248574329339764 0.141333333333333 0.296666666666667 8.1188003075532 7.9643527451866 0.141333333333333 0.296666666666667 0.154212639017667 0.159795566411891 1.65576321387419 1.62846239893108 Q7Z6Z7 HUWE1 Q7Z6Z7.S3018.p_HUWE1 Q7Z6Z7_S3018s _1_1_3018_3018 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36234.36234.5 28.73 20.69 1.11 7 1 1 0 911.2703 4472.351 S3018s TMT10 2997 (R) TAPSTNSSAPAVVGNPGVTEVsPEFLAALPPAIQEEVLAQQR (A) T(0.0)APS(0.0)T(0.0)NS(0.0)S(0.0)APAVVGNPGVT(0.0)EVS(0.99)PEFLAALPPAIQEEVLAQQR s:Phosphorylated S HUWE1 485818.9 2 44 11.1 1210.45 HUMAN 1 8.1188 7.9644 NPHDGVVTPAASPSL-p J3KNL6;T197-p NPHDGVVTPAASPSL 0.779056963761954 0.698685612472001 0.08 0.095 2.08250607989329 2.13984284837956 0.0799999999999999 0.0950000000000001 0.619083732057274 0.61096413254689 0.526997055492703 0.53948897294781 J3KNL6 SEC16A J3KNL6.T197.p_SEC16A J3KNL6_T197t_1_1_197_197 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21316.21316.4 10.92 8.42 10.916 4 1 1 0 1126.3033 4421.2159 N190n T197t TMT10 189 (R) QnPHDGVVtPAASPSLPQPGLQMPGQWGPVQGGPQPSGQHR (S) QN(1.0)PHDGVVT(0.99)PAAS(0.0)PS(0.0)LPQPGLQMPGQWGPVQGGPQPS(0.0)GQHR n:Deamidated,t:Phosphorylated T SEC16A 253486.5 1 6 15.1 1143.82 HUMAN 1 2.0825 2.1398 NPIQGLASKWDYEKN-p P13073;S158-p NPIQGLASKWDYEKN 0.735304684778739 0.00818760311846468 -0.0533333333333333 -0.45 2.52845593741875 29.7012437089077 -0.0533333333333333 -0.45 0.558668784927388 0.00107121249330267 -0.622893873784217 -6.33183378881502 P13073 COX4I1 P13073.S158.p_COX4I1 P13073_S158s _1_1_158_158 P13073 P13073 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27015.27015.3 10.99 10.99 10.989 2 1 1 0 839.1261 2435.3902 S158s TMT10 150 (K) VNPIQGLAsKWDYEK (N) VNPIQGLAS(0.99)KWDY(0.0)EK K:TMT10,s:Phosphorylated S COX4I1 19633.4 2 3 4480.1 30.88 HUMAN 1 -2.5285 -29.7012 NPIRRPISADSAIMN-p Q00610-2;S67-p NPIRRPISADSAIMN 0.76119081695692 0.573763212763696 0.074 0.0743333333333333 2.27452128107014 3.25261295942931 0.074 0.0743333333333333 0.592308372900964 0.4728666702208 0.568773592579369 0.771156413795388 Q00610 CLTC Q00610.2.S67.p_CLTC Q00610-2_S67s _1_1_67_67 Q00610-2 A0A087WVQ6|Q00610|Q00610-2|J3KS13|J3QL20 Isoform 2 of Clathrin heavy chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15576.15576.3 14.18 14.18 1.182 3 1 1 0 699.3708 2016.1312 S67s TMT10 64 (R) RPIsADSAIMNPASK (V) RPIS(0.99)ADS(0.0)AIMNPAS(0.0)K K:TMT10,s:Phosphorylated S CLTC 189655.7 1 1 1116.1 175.54 HUMAN 1 2.2745 3.2526 NPKFLNKSPEEPSTP-p O94913;S169-p NPKFLNKSPEEPSTP 0.373737854391693 0.228587811802264 -0.12 -0.126666666666667 7.91751081692575 8.44232706150727 -0.12 -0.126666666666667 0.161528410066296 0.143142070173069 -1.62084761109022 -1.71124514930102 O94913 PCF11 O94913.S169.p_PCF11 O94913_S169s _1_1_169_169 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.29250.29250.4 21.22 19.13 2.36 9 1 1 0 1029.8093 4036.2461 S169s TMT10 165 (K) FLNKsPEEPSTPGTVVSSPSISTPPIVPDIQK (N) FLNKS(0.99)PEEPS(0.0)T(0.0)PGT(0.0)VVS(0.0)S(0.0)PS(0.0)IS(0.0)T(0.0)PPIVPDIQK K:TMT10,s:Phosphorylated S PCF11 173731.7 2 1 508.1 288.88 HUMAN 1 -7.9175 -8.4423 NPKQRRFSDQAAGPA-p Q7KZI7;S409-p NPKQRRFSDQAAGPA 0.415767769381825 0.946222530358243 -0.160666666666667 -0.012 7.0332329883552 0.342870903116932 -0.160666666666667 -0.012 0.198005248026589 0.924087104324655 -1.46682922645328 -0.0998029382993963 Q7KZI7 MARK2 Q7KZI7.S409.p_MARK2 Q7KZI7_S409s _1_1_409_409 Q7KZI7 Q7KZI7|Q7KZI7-8|Q7KZI7-11|Q7KZI7-6|Q7KZI7-3|Q7KZI7-12|Q7KZI7-9|Q7KZI7-4|Q7KZI7-5|Q7KZI7-2|Q7KZI7-7|Q7KZI7-10 Serine/threonine-protein kinase MARK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14653.14653.3 19.96 16.51 11.309 6 1 1 0 845.761 2455.2982 S409s TMT10 407 (R) RFsDQAAGPAIPTSNSYSK (K) RFS(0.99)DQAAGPAIPT(0.0)S(0.0)NS(0.0)Y(0.0)S(0.0)K K:TMT10,s:Phosphorylated S MARK2 88308.6 6 50 200.2 451.67 HUMAN 1 -7.0332 -0.3429 NPKQRRFSDQAGPAI-p E9PC69;S409-p NPKQRRFSDQAGPAI 0.323878615336012 0.20554513896005 -0.300666666666667 -0.209 9.16962033065612 9.04070963043661 -0.300666666666667 -0.209 0.121070397120433 0.124717971036561 -1.83772904200629 -1.81475422251372 E9PC69 NotFound E9PC69.S409.p_NotFound E9PC69_S409s _1_1_409_409 E9PC69 E9PC69|Q7KZI7-14|Q7KZI7-16 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12089.12089.3 21.79 21.79 13.046 6 1 1 0 745.6942 2155.0981 S409s Hydrogen 407 (R) RFsDQAGPAIPTSNSYSK (K) RFS(0.99)DQAGPAIPT(0.0)S(0.0)NS(0.0)Y(0.0)S(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S MARK2 87089.2 10 6 200.1 451.67 HUMAN 1 -9.1696 -9.0407 NPKVKFSSQQAATKQ-p O75475;S94-p NPKVKFSSQQAATKQ 0.267978150841997 0.259916565648078 0.203666666666667 -0.118 10.8370361356866 7.70923560282442 0.203666666666667 -0.118 0.0824700744135311 0.16946360453177 2.1275832518587 -1.5841934301997 O75475 PSIP1 O75475.S94.p_PSIP1 O75475_S94s _1_1_94_94 O75475 O75475|O75475-2|O75475-3 PC4 and SFRS1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11253.11253.3 9.02 9.02 1.131 3 1 1 0 654.7061 1882.1365 S94s TMT10 90 (K) VKFSsQQAATK (Q) VKFS(0.0)S(0.99)QQAAT(0.0)K K:TMT10,s:Phosphorylated S PSIP1 60216.3 1 1 382.1 334.17 HUMAN 1 10.837 -7.7092 NPKYSLAYFNAGNIY-p G3V3A5;Y1751-p NPKYSLAYFNAGNIY 0.94478758147709 0.0804080974031953 -0.0123333333333333 0.598 0.486307252472971 14.5226579022683 -0.0123333333333333 0.598 0.894065372378691 0.0352967086191229 -0.139546243250946 2.78764695093995 G3V3A5 NotFound G3V3A5.Y1751.p_NotFound G3V3A5_Y1747yS1748sY1751y_3_3_1747_1751 G3V3A5 G3V3A5|Q3SY87|G5E9W5|Q86TZ1-2 Tetratricopeptide repeat protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4624.4624.5 7.64 3.51 3.302 6 3 3 0 786.9665 3689.8905 Y1747y S1748s Y1751y N1753n TMT10 1736 (K) DYQDAITLNPKysLAyFnAGNIYFHHR (Q) DY(0.0)QDAIT(0.0)LN(0.0)PKY(0.99)S(0.99)LAY(0.99)FN(0.99)AGN(0.0)IY(0.0)FHHR K:TMT10,y:Phosphorylated Y,s:Phosphorylated S,n:Deamidated TTC6 218038 1 2 6180.1 13.39 HUMAN 1 -0.4863 14.5227 NPLARGDSPENRTHH-p J3KNL6;S342-p NPLARGDSPENRTHH 0.45060350179761 0.18916159341887 0.158333333333333 0.276 6.39382803343397 9.51064223847941 0.158333333333333 0.276 0.229412562882502 0.111927235225332 1.35443045080722 1.89607783496532 J3KNL6 SEC16A J3KNL6.S342.p_SEC16A J3KNL6_S342s_1_1_342_342 J3KNL6 F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2|J3KNL6 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11244.11244.4 14.7 14.7 7.253 2 1 1 0 829.667 3252.7147 Q319q S342s Hydrogen 319 (R) qNPGVKNEHRPASALVNPLARGDsPENR (T) Q(1.0)NPGVKNEHRPAS(0.0)ALVNPLARGDS(0.99)PENR K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S SEC16A 253486.5 23 9 15.1 1143.82 HUMAN 1 6.3938 9.5106 NPLERSPSQGRQPAF-p Q6BDS2;S446-p NPLERSPSQGRQPAF 0.866370368858268 0.191914586260089 0.033 -0.162666666666667 1.21239442270394 9.42562524967719 0.033 -0.162666666666667 0.75641574065347 0.114139896665461 0.326338375292997 -1.88135794058826 Q6BDS2 UHRF1BP1 Q6BDS2.S446.p_UHRF1BP1 Q6BDS2_S446s _1_1_446_446 Q6BDS2 Q6BDS2|H7C1J4 UHRF1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14639.14639.3 15.69 12.3 1.65 2 1 1 0 745.0343 2153.1202 S446s TMT10 444 (R) SPsQGRQPAFQPPAWNR (L) S(0.0)PS(0.99)QGRQPAFQPPAWNR s:Phosphorylated S UHRF1BP1 160680.5 2 25 398.2 328.88 HUMAN 1 1.2124 -9.4256 NPLHKQQSLPLRPII-p Q9NU19;S154-p NPLHKQQSLPLRPII 0.0406654415110686 0.00269659800488284 -0.542 -0.763 31.0317850676909 39.0342432421562 -0.542 -0.763 0.000788535941418024 0.000124903807042932 -6.75229322107534 -9.70534828825364 Q9NU19 TBC1D22B Q9NU19.S154.p_TBC1D22B Q9NU19_S154s_1_1_154_154 Q9NU19 Q9NU19 TBC1 domain family member 22B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32723.32723.3 16.15 16.15 99 1 1 1 0 588.6689 1701.0534 Q152q S154s Hydrogen 152 (K) qQsLPLRPIIPLVAR (I) Q(1.0)QS(1.0)LPLRPIIPLVAR q:Pyroglutamic acid,s:Phosphorylated S TBC1D22B 59365.3 3 3 3608.1 47.12 HUMAN 1 -31.0318 -39.0342 NPLHKSNSEDSSVGK-p O94885;S137-p NPLHKSNSEDSSVGK 0.99081912979397 0.435659392831856 0.00199999999999999 0.142333333333333 0.0823682337843629 4.80825770604162 0.00199999999999999 0.142333333333333 0.981212735934034 0.330502104620746 0.0246564325944228 1.06859128503967 O94885 SASH1 O94885.S137.p_SASH1 O94885_S137s _1_1_137_137 O94885 O94885 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12049.12049.4 13.21 13.21 1.103 4 1 1 0 566.5361 2183.1547 S137s TMT10 135 (K) SNsEDSSVGKGDWK (K) S(0.0)NS(0.99)EDS(0.0)S(0.0)VGKGDWK K:TMT10,s:Phosphorylated S SASH1 137734.8 3 3 295.1 379.69 HUMAN 1 0.0824 4.8083 NPLHSDDSDSDERNS-p Q05209;S606-p NPLHSDDSDSDERNS 0.449673628420121 0.514605630493757 0.101 0.0883333333333334 6.41283552090126 3.8718310915894 0.101 0.0883333333333334 0.22841070165298 0.410031187374983 1.35778875708356 0.892401730879823 Q05209 PTPN12 Q05209.S606.p_PTPN12 Q05209_S606s_1_1_606_606 Q05209 Q05209|Q05209-3|Q05209-2 Tyrosine-protein phosphatase non-receptor type 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19644.19644.4 10.26 10.26 1.213 8 1 1 0 922.4317 3605.7356 N599n S606s TMT10 593 (R) TPLSFTnPLHSDDsDSDERNSDGAVTQNK (T) T(0.0)PLS(0.0)FT(0.0)N(0.99)PLHS(0.0)DDS(0.99)DS(0.0)DERN(0.0)S(0.0)DGAVT(0.0)QN(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S PTPN12 88960.6 3 11 644.1 254.82 HUMAN 1 6.4128 3.8718 NPLLRKESAPPSLRR-p Q8WUI4-8;S237-p NPLLRKESAPPSLRR 0.981575064370413 0.255021580489068 -0.00366666666666667 -0.158666666666667 0.160778460456208 7.8173070913776 -0.00366666666666667 -0.158666666666667 0.963656275506759 0.165298643976746 -0.0477132693847825 -1.60295556188225 Q8WUI4 HDAC7 Q8WUI4.8.S237.p_HDAC7 Q8WUI4-8_S237s _1_1_237_237 Q8WUI4-8 Q8WUI4-8|J3KPH8|Q8WUI4-5|Q8WUI4-6 Isoform 8 of Histone deacetylase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7697.7697.2 10.62 6.24 1.688 2 1 1 0 761.9231 1442.8731 S237s TMT10 235 (R) KEsAPPSLR (R) KES(0.99)APPS(0.0)LR K:TMT10,s:Phosphorylated S HDAC7 109962.1 6 2 2445.1 83.2 HUMAN 1 -0.1608 -7.8173 NPLMRRNSVTPLASP-p A0A1W2PR17;S461-p NPLMRRNSVTPLASP 0.266885369772816 0.71277024650903 -0.169333333333333 -0.0356666666666666 10.8752833047816 2.02352576612655 -0.169333333333333 -0.0356666666666666 0.0817469709927472 0.627548684304176 -2.13427403857097 -0.513945778804669 A0A1W2PR17 NotFound A0A1W2PR17.S461.p_NotFound A0A1W2PR17_S461s _1_1_461_461 A0A1W2PR17 A0A1W2PR17|Q16875-4|Q5VX20|Q16875-2|Q5W015|Q16875-3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11426.11426.2 14.11 14.11 1.135 4 1 1 0 1018.0529 1955.1326 S461s TMT10 459 (R) RNsVTPLASPEPTK (K) RNS(0.99)VT(0.0)PLAS(0.0)PEPT(0.0)K K:TMT10,s:Phosphorylated S PFKFB3 65177.2 9 3 2634.1 75.78 HUMAN 1 -10.8753 -2.0235 NPLPSKETIEQEKQA-p P62328;T34-p NPLPSKETIEQEKQA 0.0622506947834567 0.626742135312566 0.464333333333333 0.103666666666667 26.2692933821046 2.75919098025295 0.464333333333333 0.103666666666667 0.00236086232552581 0.529762120738308 5.37260116388296 0.670972054002829 P62328 TMSB4X P62328.T34.p_TMSB4X P62328_T34t _1_1_34_34 P62328 P62328 Thymosin beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16926.17138.3 14.59 14.59 2.167 2 1 1 0 760.7531 2200.2792 T34t TMT10 27 (K) NPLPSKEtIEQEK (Q) NPLPS(0.0)KET(0.99)IEQEK K:TMT10,t:Phosphorylated T TMSB4X 5052.6 2 5 2087.1 98.1 HUMAN 1 26.2693 2.7592 NPLTSQKSLDQPFLS-p Q8WWN8;S1444-p NPLTSQKSLDQPFLS 0.281543097513104 0.0549211202939682 -0.184 -0.322 10.4071223902428 16.7971763083428 -0.184 -0.322 0.0910516375612452 0.0209065498909204 -2.05253890648534 -3.22037559147543 Q8WWN8 ARAP3 Q8WWN8.S1444.p_ARAP3 Q8WWN8_S1444s _1_1_1444_1444 Q8WWN8 Q8WWN8|G5E9Y3|Q8WWN8-2 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22437.22437.2 10.67 10.67 10.668 2 1 1 0 786.9244 1492.8776 S1444s TMT10 1444 (K) sLDQPFLSK (S) S(0.99)LDQPFLS(0.0)K K:TMT10,s:Phosphorylated S ARAP3 171609.8 1 1 6603.1 10.67 HUMAN 1 -10.4071 -16.7972 NPMDSPHSPISPLPP-p Q71F56;S550-p NPMDSPHSPISPLPP 0.904333446509495 0.843126306416546 -0.0176666666666667 -0.0266666666666666 0.858453589520205 1.04091239647423 -0.0176666666666667 -0.0266666666666666 0.820643702338459 0.786880458932851 -0.237986153571615 -0.284081482032447 Q71F56 MED13L Q71F56.S550.p_MED13L Q71F56_S550s _1_1_550_550 Q71F56 Q71F56 Mediator of RNA polymerase II transcription subunit 13-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25250.25250.3 14.4 14.4 2.656 5 1 1 0 1054.1954 3080.5859 S550s TMT10 539 (K) QMNLNPMDSPHsPISPLPPTLSPQPR (G) QMNLNPMDS(0.0)PHS(0.99)PIS(0.0)PLPPT(0.0)LS(0.0)PQPR s:Phosphorylated S MED13L 245507 2 3 415.1 321.44 HUMAN 1 -0.8585 -1.0409 NPMDSSRSLGDLGPF-p Q5SZD1;S25-p NPMDSSRSLGDLGPF 0.764738958266359 0.861932783749813 -0.0493333333333333 0.025 2.23667491589869 0.909425279391427 -0.0493333333333333 0.0250000000000001 0.597492569090633 0.811068382927588 -0.560600083707299 0.250977381879206 Q5SZD1 C6orf141 Q5SZD1.S25.p_C6orf141 Q5SZD1_S25s _1_1_25_25 Q5SZD1 Q5SZD1 Uncharacterized protein C6orf141 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20534.20534.3 17.21 17.21 1.106 3 1 1 0 879.4229 2556.2826 S25s TMT10 12 (R) GPQGAANPMDSSRsLGDLGPFPR (E) GPQGAANPMDS(0.0)S(0.0)RS(0.99)LGDLGPFPR s:Phosphorylated S C6orf141 26753.2 2 1 4328.1 33.43 HUMAN 1 -2.2367 0.9094 NPNARLRSEENE___-p F8W727;S149-p NPNARLRSEENE___ 0.733191468551962 0.645632365295215 -0.0593333333333333 -0.0466666666666667 2.55140316669643 2.59081291744687 -0.0593333333333334 -0.0466666666666667 0.555724678579792 0.550704605230793 -0.627725551965545 -0.635919218031154 F8W727 NotFound F8W727.S149.p_NotFound F8W727_S149s _1_1_149_149 F8W727 F8W727|P62910 60S ribosomal protein L32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5678.5678.2 8.25 8.25 99 1 1 1 0 593.2713 1105.5687 S149s TMT10 147 (R) LRsEENE (-) LRS(1.0)EENE s:Phosphorylated S RPL32 18133 1 3 3198.1 57.8 HUMAN 1 -2.5514 -2.5908 NPNRDRGSWAQPVDT-p Q9NX05;S560-p NPNRDRGSWAQPVDT 0.255264993053251 0.148943828729514 0.168 0.167666666666667 11.2773474395443 10.8849601514987 0.168 0.167666666666667 0.0745186976229438 0.0815650271062042 2.20477140594485 2.13501631420121 Q9NX05 FAM120C Q9NX05.S560.p_FAM120C Q9NX05_S560s _1_1_560_560 Q9NX05 Q9NX05|F8W881 Constitutive coactivator of PPAR-gamma-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26048.26048.4 17.57 13.53 5.384 8 1 1 0 966.2201 3781.8653 S560s TMT10 557 (R) DRGsWAQPVDTGVSEASLGDGEPHIPSLLSMSTR (N) DRGS(0.99)WAQPVDT(0.0)GVS(0.0)EAS(0.0)LGDGEPHIPS(0.0)LLS(0.0)MS(0.0)T(0.0)R s:Phosphorylated S FAM120C 121727 1 1 2637.1 75.68 HUMAN 1 11.2773 10.885 NPNTAPPTPELHGIN-p P78364;T922-p NPNTAPPTPELHGIN 0.372999967794591 0.920247532296631 0.143666666666667 0.01 7.94446439779286 0.508940130605939 0.143666666666667 0.01 0.160529022146176 0.889418148489615 1.62552515786913 0.145704756672503 P78364 PHC1 P78364.T922.p_PHC1 P78364_T922t _1_1_922_922 P78364 P78364|J3KQH6 Polyhomeotic-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24941.24941.3 24.21 24.21 5.547 5 1 1 0 1084.2095 3170.6432 T922t TMT10 912 (R) DLGNPNTAPPtPELHGINPVFLSSNPSR (W) DLGNPNT(0.0)APPT(0.99)PELHGINPVFLS(0.0)S(0.0)NPS(0.0)R t:Phosphorylated T PHC1 106159.3 2 7 1503.1 135.84 HUMAN 1 7.9445 0.5089 NPPGPLKSPQVLGSS-p Q86UU0;S975-p NPPGPLKSPQVLGSS 0.722162465540101 0.344181187663868 -0.055 0.092 2.6746194373085 6.13604353597487 -0.055 0.092 0.540179447426301 0.243442077964897 -0.653511859837853 1.30844468284052 Q86UU0 BCL9L Q86UU0.S975.p_BCL9L Q86UU0_S975s _1_1_975_975 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26917.26917.4 20.81 20.81 2.104 8 1 1 0 973.7788 3812.1145 S975s TMT10 954 (K) SPQTPSQMVPLPSANPPGPLKsPQVLGSSLSVR (S) S(0.0)PQT(0.0)PS(0.0)QMVPLPS(0.0)ANPPGPLKS(0.99)PQVLGS(0.0)S(0.0)LS(0.0)VR K:TMT10,s:Phosphorylated S BCL9L 157526.3 3 17 139.1 524.37 HUMAN 1 -2.6746 6.136 NPPVEDSSDEDDKRN-p Q8TCJ2;S499-p NPPVEDSSDEDDKRN 0.274203367926357 0.00698909749920336 0.324666666666667 -0.564666666666667 10.6367862534141 30.8970597460307 0.324666666666667 -0.564666666666667 0.0863617381755407 0.000813381003781723 2.09259245150845 -6.69872943405482 Q8TCJ2 STT3B Q8TCJ2.S499.p_STT3B Q8TCJ2_S498sS499s_2_2_498_499 Q8TCJ2 Q8TCJ2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12733.12936.4 11.23 11.23 11.231 3 2 2 0 878.6528 3351.6544 S498s S499s TMT10 491 (R) ENPPVEDssDEDDKRNQGNLYDK (A) ENPPVEDS(0.99)S(0.99)DEDDKRNQGNLY(0.0)DK K:TMT10,s:Phosphorylated S STT3B 94300.1 1 6 3653.1 46.06 HUMAN 1 10.6368 -30.8971 NPQDLQGSLQELKER-p Q9NVX2;S321-p NPQDLQGSLQELKER 0.950466896477293 0.0762136477771539 -0.0106666666666667 0.237333333333333 0.435058997761233 14.8355284563427 -0.0106666666666667 0.237333333333333 0.904678147840338 0.0328433277594751 -0.125474177590185 2.84582884456819 Q9NVX2 NLE1 Q9NVX2.S321.p_NLE1 Q9NVX2_S321s _1_1_321_321 Q9NVX2 Q9NVX2|A0A0A0MRH0 Notchless protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25396.25396.3 12 12 4.392 3 1 1 0 1023.1842 2987.5726 S321s TMT10 303 (R) TGAFEPAEASVNPQDLQGsLQELK (E) T(0.0)GAFEPAEAS(0.0)VNPQDLQGS(0.99)LQELK K:TMT10,s:Phosphorylated S NLE1 53832.8 1 1 6371.1 12 HUMAN 1 -0.4351 14.8355 NPQDSVGSPCSRVGE-p A0A1B0GTU4;S106-p NPQDSVGSPCSRVGE 0.444420732314114 0.0176032432582518 -0.152 -0.584333333333333 6.49087445760752 24.1715898637372 -0.152 -0.584333333333333 0.224343016071187 0.00382684624616068 -1.37156483150949 -4.83120844716507 A0A1B0GTU4 NotFound A0A1B0GTU4.S106.p_NotFound A0A1B0GTU4_S106s _1_1_106_106 A0A1B0GTU4 A0A1B0GTU4|A0A1B0GU60|P49023-3|F5GZ78|P49023-2 Paxillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7387.7387.3 13.35 13.35 1.246 7 1 1 0 691.9749 1993.9446 S106s TMT10 94 (K) TSSVSNPQDSVGsPCSR (V) T(0.0)S(0.0)S(0.0)VS(0.0)NPQDS(0.0)VGS(0.99)PCS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PXN 117843.4 3 2 288.1 382.57 HUMAN 1 -6.4909 -24.1716 NPQQRRISQSQPVRG-p O95071;S1549-p NPQQRRISQSQPVRG 0.0378666968430127 0.265566979326147 -0.611666666666667 -0.333333333333333 32.3728709673478 7.58289525193019 -0.611666666666667 -0.333333333333333 0.000579045783170823 0.174465867728269 -7.18784652926881 -1.56224028803725 O95071 UBR5 O95071.S1549.p_UBR5 O95071_S1549s _1_1_1549_1549 O95071 O95071|O95071-2|E7EMW7 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4611.4611.3 11.55 5.47 2.265 2 1 1 0 460.5828 1299.7694 S1549s TMT10 1547 (R) RIsQSQPVR (G) RIS(0.99)QS(0.0)QPVR s:Phosphorylated S UBR5 312542 3 16 80.1 636.57 HUMAN 1 -32.3729 -7.5829 NPQSPQPSPYNSPKP-p Q96PU5;S483-p NPQSPQPSPYNSPKP 0.560423836734948 0.261741524823828 -0.0976666666666667 -0.124666666666667 4.63563011677928 7.66885884210553 -0.0976666666666667 -0.124666666666667 0.343903810842663 0.171046470000217 -1.03684120119738 -1.57717986808484 Q96PU5 NEDD4L Q96PU5.S483.p_NEDD4L Q96PU5_S479sS483sS487s_3_3_479_487 Q96PU5 A0A1B0GVY1|Q96PU5|Q96PU5-7|Q96PU5-5|Q96PU5-6|Q96PU5-2|Q96PU5-3|Q96PU5-4|Q96PU5-9 E3 ubiquitin-protein ligase NEDD4-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11862.11862.4 10.15 10.15 1.484 6 3 3 0 844.4022 3134.6838 S479s S483s S487s TMT10 472 (K) DTLSNPQsPQPsPYNsPKPQHK (V) DT(0.0)LS(0.0)NPQS(0.99)PQPS(0.99)PY(0.0)NS(0.99)PKPQHK K:TMT10,s:Phosphorylated S NEDD4L 112272 5 23 495.1 293.21 HUMAN 1 -4.6356 -7.6689 NPQVEVLSEEEGEEE-p Q70CQ2;S2488-p NPQVEVLSEEEGEEE 0.857801951607827 0.0523079852532638 -0.0373333333333333 0.630333333333333 1.29904994958306 17.1010211460219 -0.0373333333333334 0.630333333333333 0.741472425987159 0.0194938619144774 -0.347296594583075 3.28004038745464 Q70CQ2 USP34 Q70CQ2.S2488.p_USP34 Q70CQ2_S2488s _1_1_2488_2488 Q70CQ2 Q70CQ2|Q70CQ2-2|Q70CQ2-3 Ubiquitin carboxyl-terminal hydrolase 34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.34512.34512.4 21.9 21.56 2.928 2 1 1 0 1013.9673 3972.8861 S2488s TMT10 2478 (K) GPENPQVEVLsEEEGEEEEEEEDILSLAEEK (Y) GPENPQVEVLS(0.99)EEEGEEEEEEEDILS(0.0)LAEEK K:TMT10,s:Phosphorylated S USP34 409988.3 1 4 713.1 238.32 HUMAN 1 -1.299 17.101 NPRASNNSMENYLSK-p E7ESJ3;S1660-p NPRASNNSMENYLSK 0.300657590513664 0.296622788066258 -0.154 -0.111333333333333 9.80148011176292 6.96848864167525 -0.154 -0.111333333333333 0.104677173872635 0.200979210483647 -1.94724051251166 -1.45509598554303 E7ESJ3 NotFound E7ESJ3.S1660.p_NotFound E7ESJ3_S1660s _1_1_1660_1660 E7ESJ3 E7ESJ3|Q9UPS8-3|Q9UPS8-2 Ankyrin repeat domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16796.16796.3 9.81 5.59 2.253 4 1 1 0 632.6376 1815.9311 S1660s TMT10 1656 (R) ASNNsMENYLSK (M) AS(0.0)NNS(0.99)MENY(0.0)LS(0.0)K K:TMT10,s:Phosphorylated S ANKRD26 199524.4 1 13 812.1 221.02 HUMAN 1 -9.8015 -6.9685 NPRKYLRSVGDGETV-p P67809;S102-p NPRKYLRSVGDGETV 0.00861592953244037 0.000952253650599092 -1.577 -1.865 54.3045348220364 62.2658059132444 -1.577 -1.86590147805468 3.71147481410296e-06 5.93498203470493e-07 -18.9596242687433 -26.5803247924 P67809 YBX1 P67809.S102.p_YBX1 P67809_S102s _1_1_102_102 P67809 P16989-3|P67809|P16989-2 Nuclease-sensitive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20728.20728.4 22.59 22.09 4.082 3 1 1 0 781.6673 3043.6555 S102s TMT10 98 (R) KYLRsVGDGETVEFDVVEGEK (G) KY(0.0)LRS(0.99)VGDGET(0.0)VEFDVVEGEK K:TMT10,s:Phosphorylated S YBX1 35923.5 2 11 929.2 199.34 HUMAN 1 -54.3045 -62.2658 NPRYHGLSPSSQARA-p O94761;S323-p NPRYHGLSPSSQARA 0.746396283671232 0.0150452882196435 -0.0533333333333333 -0.368 2.41193692137222 25.2133395214618 -0.0533333333333334 -0.368 0.573860467587785 0.00301069005401155 -0.598212286400399 -5.0915870960559 O94761 RECQL4 O94761.S323.p_RECQL4 O94761_S323s _1_1_323_323 O94761 O94761|A0A087WZ30 ATP-dependent DNA helicase Q4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6404.6404.3 14.49 14.49 4.519 4 1 1 0 504.5784 1431.7542 S323s TMT10 319 (R) YHGLsPSSQAR (A) Y(0.0)HGLS(0.99)PS(0.0)S(0.0)QAR s:Phosphorylated S RECQL4 135071.6 2 5 2196.1 93.8 HUMAN 1 -2.4119 -25.2133 NPSPTQKSPVQPVED-p Q6EKJ0;S521-p NPSPTQKSPVQPVED 0.411488642418484 0.0254220667681766 -0.125 0.321333333333333 7.11321424806333 21.7021499054347 -0.125 0.321333333333333 0.194392083779005 0.00675748374144801 -1.48081658160754 4.24973319739875 Q6EKJ0 GTF2IRD2B Q6EKJ0.S521.p_GTF2IRD2B Q6EKJ0_S521s _1_1_521_521 Q6EKJ0 A0A0A0MSY2|Q6EKJ0 General transcription factor II-I repeat domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29517.29517.4 19.87 19.87 1.239 3 1 1 0 937.499 3667.0099 S521s TMT10 510 (K) QVFANPSPTQKsPVQPVEDLAGNLWEK (L) QVFANPS(0.0)PT(0.0)QKS(0.99)PVQPVEDLAGNLWEK K:TMT10,s:Phosphorylated S GTF2IRD2B 108600.4 2 3 3816.1 42.53 HUMAN 1 -7.1132 21.7021 NPSRCSVSLSNVEAR-p P47712;S729-p NPSRCSVSLSNVEAR 0.372553852320375 0.072354838148445 0.148666666666667 -0.480333333333333 7.95500535310329 15.1556993654559 0.148666666666667 -0.480333333333333 0.1601398674463 0.0305091468599975 1.62735424695781 -2.90578371296131 P47712 PLA2G4A P47712.S729.p_PLA2G4A P47712_S729s _1_1_729_729 P47712 P47712 Cytosolic phospholipase A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12950.12950.2 14.21 9.81 1.436 3 1 1 0 765.8637 1450.7521 S729s TMT10 726 (R) CSVsLSNVEAR (R) CS(0.0)VS(0.99)LS(0.0)NVEAR C:Carbamidomethylation,s:Phosphorylated S PLA2G4A 85750.9 3 2 4645.1 28.38 HUMAN 1 7.955 -15.1557 NPSRQPGSVPRHVSP-p Q13443;S752-p NPSRQPGSVPRHVSP 0.283907100703039 0.180409337221722 -0.237 -0.177666666666667 10.3163892831311 9.78348650710405 -0.237 -0.177666666666667 0.0929739048990063 0.105111769990599 -2.03673570530845 -1.94335126463478 Q13443 ADAM9 Q13443.S752.p_ADAM9 Q13443_S752s _1_1_752_752 Q13443 Q13443 Disintegrin and metalloproteinase domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4358.4358.3 12.67 12.67 3.996 2 1 1 0 606.3056 1736.9353 S752s TMT10 742 (K) NQANPSRQPGsVPR (H) NQANPS(0.0)RQPGS(0.99)VPR s:Phosphorylated S ADAM9 93064.8 1 2 2476.1 81.85 HUMAN 1 -10.3164 -9.7835 NPSVATFSLINGNIC-p P30550;S372-p NPSVATFSLINGNIC 0.180600987130833 0.34875903900935 0.227333333333333 -0.0956666666666666 14.660583989115 6.06511314338071 0.227333333333333 -0.0956666666666667 0.0341933460155331 0.247450699407816 2.81503249867461 -1.29584324797171 P30550 GRPR P30550.S372.p_GRPR P30550_S372s _1_1_372_372 P30550 P30550 Gastrin-releasing peptide receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21770.21770.3 16.85 16.85 1.293 5 1 1 0 842.7388 2446.2346 S372s TMT10 363 (K) STNPSVATFsLINGNICHER (Y) S(0.0)T(0.0)NPS(0.0)VAT(0.0)FS(0.99)LINGNICHER C:Carbamidomethylation,s:Phosphorylated S GRPR 43996.8 1 3 4735.1 27.29 HUMAN 1 14.6606 -6.0651 NPTKGLDTPGKRSVD-p A0A087X165;T930-p NPTKGLDTPGKRSVD 0.48665885203013 0.0217204446464741 0.106666666666667 -0.341333333333333 5.76135879941747 22.7382543150088 0.106666666666667 -0.341333333333333 0.265377513183698 0.00532322187869183 1.24193255919295 -4.48786962618086 A0A087X165 NotFound A0A087X165.T930.p_NotFound A0A087X165_T930t _1_1_930_930 A0A087X165 A0A087X165|Q9C0H9-5 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6442.6442.3 8.42 5.24 99 1 1 1 0 461.2582 1301.7942 T930t TMT10 927 (K) GLDtPGKR (S) GLDT(1.0)PGKR K:TMT10,t:Phosphorylated T SRCIN1 130745.5 3 27 98.1 603.22 HUMAN 1 5.7614 -22.7383 NPVFGVMS_______-p Q9P1U1;S418-p NPVFGVMS_______ 0.732725172885021 0.91095748661398 -0.056 -0.0146666666666667 2.55655972629602 0.567053530885869 -0.056 -0.0146666666666667 0.555065235050342 0.87759602387228 -0.628810006559764 -0.16143473250898 Q9P1U1 ACTR3B Q9P1U1.S418.p_ACTR3B Q9P1U1_S418s _1_1_418_418 Q9P1U1 Q9P1U1|B4DXW1|Q9P1U1-3|Q9P1U1-2 Actin-related protein 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18407.18407.2 15.25 15.25 99 1 1 1 0 648.804 1216.6346 S418s TMT10 410 (R) HNPVFGVMs (-) HNPVFGVMS(1.0) s:Phosphorylated S ACTR3B 48120.3 2 2 4338.1 33.27 HUMAN 1 -2.5566 -0.5671 NPVLDVVSNPEQTAG-p Q12888-2;S68-p NPVLDVVSNPEQTAG 0.998250411735214 0.036609574543254 0.000333333333333334 0.311666666666667 0.011340291044313 19.3274219008457 0.000333333333333346 0.311666666666667 0.997392207702535 0.0116750247502999 0.00342206750240203 3.7327275602139 Q12888 TP53BP1 Q12888.2.S68.p_TP53BP1 Q12888-2_S68s _1_1_68_68 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19181.19181.5 30.21 30.21 11.267 3 1 1 0 776.176 3796.8778 S68s TMT10 60 (K) ENPVLDVVsNPEQTAGEERGDGNSGFNEHLK (E) ENPVLDVVS(0.99)NPEQT(0.0)AGEERGDGNS(0.0)GFNEHLK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 2 2 3.1 2297.07 HUMAN 1 0.0113 19.3274 NPVVRSKSYNTPLLN-p P85299-5;S277-p NPVVRSKSYNTPLLN 0.229065978620244 0.238635480093195 0.184666666666667 -0.129666666666667 12.2998141974528 8.19702361719924 0.184666666666667 -0.129666666666667 0.0588868848167388 0.151459890419964 2.38562894201411 -1.6687799794299 P85299 PRR5 P85299.5.S277.p_PRR5 P85299-5_S277s _1_1_277_277 P85299-5 P85299-5|P85299-3|P85299-4|P85299-2 Isoform 5 of Proline-rich protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19213.19213.3 22.69 22.69 1.182 5 1 1 0 997.8217 2911.4747 S277s TMT10 277 (K) sYNTPLLNPVQEHEAEGAAAGGTSIR (R) S(0.99)Y(0.0)NT(0.0)PLLNPVQEHEAEGAAAGGT(0.0)S(0.0)IR s:Phosphorylated S PRR5 45456.6 4 4 2028.1 101.7 HUMAN 1 12.2998 -8.197 NQDLAPNSAEQASIL-p Q12905;S68-p NQDLAPNSAEQASIL 0.105885561453204 0.948265711627684 0.411666666666667 -0.00699999999999997 20.5369965982368 0.329965936960783 0.411666666666667 -0.00699999999999996 0.0088369081332288 0.926837092816505 3.99515517164703 -0.0961740511272506 Q12905 ILF2 Q12905.S68.p_ILF2 Q12905_S68s _1_1_68_68 Q12905 Q12905|B4DY09|A0A0A0MRL0 Interleukin enhancer-binding factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32237.32237.3 9.91 9.91 1.704 4 1 1 0 879.8012 2557.4238 S68s TMT10 61 (R) NQDLAPNsAEQASILSLVTK (I) NQDLAPNS(0.99)AEQAS(0.0)ILS(0.0)LVT(0.0)K K:TMT10,s:Phosphorylated S ILF2 43289.6 3 2 2814.1 69.64 HUMAN 1 20.537 -0.33 NQDNQICSILLQENT-p Q8IWJ2;S317-p NQDNQICSILLQENT 0.188214971231843 0.0789167244059908 0.379333333333333 0.923333333333333 14.232689539989 14.6389362033145 0.379333333333333 0.923333333333334 0.037733843683215 0.0343642112121727 2.73574160053863 2.8092244066274 Q8IWJ2 GCC2 Q8IWJ2.S317.p_GCC2 Q8IWJ2_S317sT324t_2_2_317_324 Q8IWJ2 Q8IWJ2 GRIP and coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29789.29789.4 7.86 2.32 1.151 4 2 2 0 1014.4787 3893.0115 S317s N323n T324t N331n Hydrogen 304 (R) KATSNANQDNQICsILLQEntFVEQVVnEK (V) KAT(0.0)S(0.0)N(0.0)AN(0.0)QDN(0.0)QICS(0.99)ILLQEN(0.99)T(0.99)FVEQVVN(0.99)EK K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T GCC2 196990.2 1 94 9.3 1298.62 HUMAN 1 14.2327 14.6389 NQDNSRKSPKSYLEI-p Q6IEG0;S204-p NQDNSRKSPKSYLEI 0.036022948076598 0.259442668925993 0.642666666666667 0.115333333333333 33.4433236386563 7.71874804512709 0.642666666666667 0.115333333333333 0.000452551111752239 0.169092831081193 7.55213520895383 1.58584545765745 Q6IEG0 SNRNP48 Q6IEG0.S204.p_SNRNP48 Q6IEG0_S204s _1_1_204_204 Q6IEG0 Q6IEG0 U11/U12 small nuclear ribonucleoprotein 48 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5352.5352.4 11.28 7.65 2.543 2 1 1 0 514.2897 1974.1699 S204s TMT10 196 (K) INQDNSRKsPK (S) INQDNS(0.0)RKS(0.99)PK K:TMT10,s:Phosphorylated S SNRNP48 40364.1 3 1 5695.1 17.06 HUMAN 1 33.4433 7.7187 NQEPTPKSPCGLTEQ-p E9PGC8;S1410-p NQEPTPKSPCGLTEQ 0.037721822717877 0.00759424447007243 -0.589666666666667 -0.49 32.4607517459582 30.2734654861983 -0.589666666666667 -0.49 0.000567446374264135 0.000938973750224742 -7.21718457289962 -6.50532414969 E9PGC8 NotFound E9PGC8.S1410.p_NotFound E9PGC8_S1410s _1_1_1410_1410 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27864.27864.5 24.31 19.18 1.137 11 1 1 0 1016.1083 4996.5705 S1410s TMT10 1382 (R) SLSPEDAESLSVLSVPSPDTANQEPTPKsPCGLTEQYLHK (D) S(0.0)LS(0.0)PEDAES(0.0)LS(0.0)VLS(0.0)VPS(0.0)PDT(0.0)ANQEPT(0.0)PKS(0.99)PCGLT(0.0)EQY(0.0)LHK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MAP1A 332906.7 4 22 20.1 1016.98 HUMAN 1 -32.4608 -30.2735 NQESKVKSPVSLTAH-p P28749;S749-p NQESKVKSPVSLTAH 0.325611631944441 0.00140014198002876 -0.195333333333333 -1.61466666666667 9.12474249295311 46.1956955705297 -0.195333333333333 -1.61466666666667 0.122327964905077 2.40121165654661e-05 -1.82995867099697 -13.3027562064861 P28749 RBL1 P28749.S749.p_RBL1 P28749_S749sS762s_2_2_749_762 P28749 P28749|P28749-2 Retinoblastoma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21882.21882.5 14.83 14.83 1.172 7 2 2 0 711.6045 3394.0603 S749s S762s TMT10 747 (K) VKsPVSLTAHSLIGAsPKQTNLTK (A) VKS(0.99)PVS(0.0)LT(0.0)AHS(0.0)LIGAS(0.99)PKQT(0.0)NLT(0.0)K K:TMT10,s:Phosphorylated S RBL1 122214.1 5 14 566.1 270.71 HUMAN 1 -9.1247 -46.1957 NQFSPISSPEPEDPI-p Q92610;S146-p NQFSPISSPEPEDPI 0.418817558302796 0.00971111834999003 -0.151 0.418 6.97614253857274 28.3441786113096 -0.151 0.418 0.200625321703636 0.00146413842640704 -1.4568364408214 5.93500278940386 Q92610 ZNF592 Q92610.S146.p_ZNF592 Q92610_S145sS146s_2_2_145_146 Q92610 Q92610|H0YM74 Zinc finger protein 592 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29607.29607.5 16.57 16.57 1.428 6 2 2 0 943.4977 4553.4989 S145s S146s TMT10 122 (R) SFPGKLEPPKSEPLPTFNQFSPIssPEPEDPIK (D) S(0.0)FPGKLEPPKS(0.0)EPLPT(0.0)FNQFS(0.0)PIS(0.99)S(0.99)PEPEDPIK K:TMT10,s:Phosphorylated S ZNF592 140207.3 3 21 164.1 494.76 HUMAN 1 -6.9761 28.3442 NQGGFGNSRGGGAGL-p Q13148;S292-p NQGGFGNSRGGGAGL 0.883580859844558 0.68193221092405 0.03 -0.0536666666666667 1.06231675785141 2.27513664628035 0.03 -0.0536666666666667 0.783011831160418 0.592224452851266 0.289437703474451 -0.568836731423424 Q13148 TARDBP Q13148.S292.p_TARDBP Q13148_S292s _1_1_292_292 Q13148 Q13148|Q13148-4 TAR DNA-binding protein 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17800.17800.2 16.4 11.9 99 1 1 1 0 1018.4553 1955.931 S292s TMT10 276 (R) FGGNPGGFGNQGGFGNsR (G) FGGNPGGFGNQGGFGNS(1.0)R s:Phosphorylated S TARDBP 45081.4 2 4 2002.1 103.31 HUMAN 1 1.0623 -2.2751 NQGTVNWSVDDIVKG-p P52292;S77-p NQGTVNWSVDDIVKG 0.316524229210426 0.0294410283912632 -0.148333333333333 -0.446 9.35359134780097 20.7217899187008 -0.148333333333333 -0.446 0.116048856439793 0.00846878306381501 -1.86959044717339 -4.0316476114999 P52292 KPNA2 P52292.S77.p_KPNA2 P52292_S77s _1_1_77_77 P52292 P52292 Importin subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24200.24200.3 12.95 12.95 3.397 2 1 1 0 743.0449 2147.1497 S77s TMT10 69 (R) NNQGTVNWsVDDIVK (G) NNQGT(0.0)VNWS(0.99)VDDIVK K:TMT10,s:Phosphorylated S KPNA2 58203.2 1 3 1475.1 139.39 HUMAN 1 -9.3536 -20.7218 NQIALLDSPTALSME-p Q96L93-2;S398-p NQIALLDSPTALSME 0.662515509657473 0.124121732832605 -0.0613333333333333 -0.175 3.34750148896189 11.955727076869 -0.0613333333333333 -0.175 0.46264710731823 0.0637422357632172 -0.790151669571019 -2.32333005346071 Q96L93 KIF16B Q96L93.2.S398.p_KIF16B Q96L93-2_S398s_1_1_398_398 Q96L93-2 Q96L93|Q96L93-4|Q96L93-6|A0A1B0GTU3|Q96L93-5|Q96L93-2 Isoform 2 of Kinesin-like protein KIF16B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32133.32133.3 10.24 10.24 1.172 4 1 1 0 994.8597 2901.6007 N391n S398s TMT10 385 (K) TLLAQGnQIALLDsPTALSMEEK (L) T(0.0)LLAQGN(1.0)QIALLDS(0.99)PT(0.0)ALS(0.0)MEEK K:TMT10,n:Deamidated,s:Phosphorylated S KIF16B 160684.4 8 3 774.1 227.33 HUMAN 1 -3.3475 -11.9557 NQIERCNSLAFGGYL-p Q9NQC7;S560-p NQIERCNSLAFGGYL 0.330875085214081 0.124365022706628 -0.169 0.178666666666667 8.97721429853319 11.9422984691964 -0.169 0.178666666666667 0.126554784939562 0.0639396350458899 -1.80441843568133 2.32095261024789 Q9NQC7 CYLD Q9NQC7.S560.p_CYLD Q9NQC7_S560s _1_1_560_560 Q9NQC7 Q9NQC7|Q9NQC7-2|J3KRR7 Ubiquitin carboxyl-terminal hydrolase CYLD HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.31522.31531.4 25.38 25.38 6.544 4 1 1 0 867.4374 3386.7579 S560s TMT10 558 (R) CNsLAFGGYLSEVVEENTPPKMEK (E) CNS(0.99)LAFGGY(0.0)LS(0.0)EVVEENT(0.0)PPKMEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CYLD 109082.3 4 4 1585.1 129.45 HUMAN 1 -8.9772 11.9423 NQILEVKSPIKQSKS-p P42568;S483-p NQILEVKSPIKQSKS 0.60792882031918 0.0283299286573973 -0.0706666666666667 -0.299333333333333 4.00346528566044 20.9681236737614 -0.0706666666666667 -0.299333333333333 0.397789642956021 0.00800179890123415 -0.917791945087685 -4.08580807471381 P42568 MLLT3 P42568.S483.p_MLLT3 P42568_S483s _1_1_483_483 P42568 P42568|P42568-2|B1APT5|A0A0D9SF09 Protein AF-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17640.17640.3 17.3 12.04 10.1 2 1 1 0 789.1211 2285.3796 S483s TMT10 473 (K) TNNNQILEVKsPIK (Q) T(0.0)NNNQILEVKS(0.99)PIK K:TMT10,s:Phosphorylated S MLLT3 63692.6 7 3 2734.1 72.29 HUMAN 1 -4.0035 -20.9681 NQLDGFDSRGDVKVI-p P62191;S321-p NQLDGFDSRGDVKVI 0.638283004887053 0.537976925171844 -0.078 0.109666666666667 3.63722269593081 3.62170319115454 -0.078 0.109666666666667 0.432790511178201 0.434339853857163 -0.847116462957229 0.843956649438393 P62191 PSMC1 P62191.S321.p_PSMC1 P62191_S321s _1_1_321_321 P62191 P62191|P62191-2 26S proteasome regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34990.34990.4 16.79 13.82 11.343 2 1 1 0 673.0957 2609.4009 S321s TMT10 308 (R) TMLELLNQLDGFDsRGDVK (V) T(0.0)MLELLNQLDGFDS(0.99)RGDVK K:TMT10,s:Phosphorylated S PSMC1 49354.8 2 2 3477.1 50.1 HUMAN 1 -3.6372 3.6217 NQLNPIGSLQELAIH-p O75569;S130-p NQLNPIGSLQELAIH 0.852134949471934 0.0696791666443547 -0.0496666666666667 0.375 1.34610068325715 15.3854572687634 -0.0496666666666667 0.375 0.733482795743177 0.0289370512274342 -0.358574471841902 2.94907613712607 O75569 PRKRA O75569.S130.p_PRKRA O75569_S130s _1_1_130_130 O75569 O75569|O75569-2|O75569-3 Interferon-inducible double-stranded RNA-dependent protein kinase activator A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24814.24814.4 8.32 8.32 99 1 1 1 0 623.8254 2412.3098 S130s TMT10 123 (K) NQLNPIGsLQELAIHHGWR (L) NQLNPIGS(1.0)LQELAIHHGWR s:Phosphorylated S PRKRA 34860 1 2 2945.1 65.23 HUMAN 1 -1.3461 15.3855 NQNNGAGSENFGLGV-p Q7Z739;S372-p NQNNGAGSENFGLGV 0.953628443834147 0.240224505188877 0.011 -0.115333333333333 0.404597639260621 8.16108740211753 0.011 -0.115333333333333 0.911045854006775 0.152718362864259 0.117045161040092 -1.66255577236854 Q7Z739 YTHDF3 Q7Z739.S372.p_YTHDF3 Q7Z739_S372s_1_1_372_372 Q7Z739 A0A087WY31|Q7Z739|A0A087X0Q1|A0A024R7W5 YTH domain-containing family protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27734.27734.4 18.56 18.56 1.144 5 1 1 0 1048.528 4110.1296 S372s N374n TMT10 361 (R) GAGFNQNNGAGsEnFGLGVVPVSASPSSVEVHPVLEK (L) GAGFN(0.0)QN(0.0)N(0.0)GAGS(0.99)EN(0.99)FGLGVVPVS(0.0)AS(0.0)PS(0.0)S(0.0)VEVHPVLEK K:TMT10,s:Phosphorylated S,n:Deamidated YTHDF3 63974.2 4 6 1868.1 109.97 HUMAN 1 0.4046 -8.1611 NQNQEEESEDEEDTQ-p O15042;S800-p NQNQEEESEDEEDTQ 0.733645174784926 0.320162626174638 -0.0723333333333333 0.181 2.54636312820721 6.54290047141531 -0.0723333333333334 0.181 0.556369977965016 0.22167154736641 -0.626665146080908 1.38038163766893 O15042 U2SURP O15042.S800.p_U2SURP O15042_S788sS800s_2_2_788_800 O15042 O15042|O15042-2|E7ET15|O15042-3 U2 snRNP-associated SURP motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23599.23599.4 13.34 13.34 3.749 5 2 2 0 1140.9583 4400.8599 S788s S800s TMT10 779 (K) WELFDQHEEsEEEENQNQEEEsEDEEDTQSSK (S) WELFDQHEES(0.99)EEEENQNQEEES(0.99)EDEEDT(0.0)QS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S U2SURP 118746.2 1 19 360.1 345.29 HUMAN 1 -2.5464 6.5429 NQNYLVPSPVLRILD-p Q9UID6;S88-p NQNYLVPSPVLRILD 0.531667289920303 0.124524730450313 0.098 0.188333333333333 5.07844735466901 11.93437710841 0.098 0.188333333333333 0.310566969702947 0.0640563648519964 1.11841475915382 2.31955039502292 Q9UID6 ZNF639 Q9UID6.S88.p_ZNF639 Q9UID6_S88s _1_1_88_88 Q9UID6 Q9UID6 Zinc finger protein 639 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21622.21622.3 15.46 15.46 8.376 2 1 1 0 570.3043 1628.9322 S88s TMT10 81 (R) NQNYLVPsPVLR (I) NQNY(0.0)LVPS(0.99)PVLR s:Phosphorylated S ZNF639 57593.9 4 2 2698.1 73.61 HUMAN 1 5.0784 11.9344 NQQSRDLSLEVDRDR-p O95071;S2241-p NQQSRDLSLEVDRDR 0.672632643891356 0.444004156451233 -0.0603333333333333 -0.0723333333333333 3.22563053480028 4.69499639888407 -0.0603333333333333 -0.0723333333333333 0.475813704483732 0.339234770830588 -0.765879383882155 -1.04765505719266 O95071 UBR5 O95071.S2241.p_UBR5 O95071_S2241s _1_1_2241_2241 O95071 O95071|O95071-2|E7EMW7 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23827.23827.4 14.52 14.52 14.525 2 1 1 0 657.0873 2545.3606 S2241s TMT10 2239 (R) DLsLEVDRDRDLLIQQTMR (Q) DLS(0.99)LEVDRDRDLLIQQT(0.0)MR s:Phosphorylated S UBR5 312542 3 23 80.1 636.57 HUMAN 1 -3.2256 -4.695 NQRKLLASLVKRLGD-p Q13263;S258-p NQRKLLASLVKRLGD 0.788974729037143 0.0451281476634068 -0.045 0.242666666666667 1.98417109310173 18.0051213580821 -0.045 0.242666666666667 0.633261216228256 0.0158302533045427 -0.505293755271239 3.46046781659112 Q13263 TRIM28 Q13263.S258.p_TRIM28 Q13263_S258s _1_1_258_258 Q13263 Q13263|Q13263-2 Transcription intermediary factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27210.27210.2 11.02 3.4 99 1 1 1 0 641.4013 1201.8284 S258s TMT10 255 (K) LLAsLVK (R) LLAS(1.0)LVK K:TMT10,s:Phosphorylated S TRIM28 90316.8 2 7 118.1 555.36 HUMAN 1 -1.9842 18.0051 NQSEGKGSDSDSEGD-p Q9UN37;S95-p NQSEGKGSDSDSEGD 0.290699550047721 0.00839507320642349 -0.296333333333333 0.430333333333333 10.1160362837375 29.5034149271007 -0.296333333333333 0.430333333333333 0.0973635435392021 0.00112113653998972 -2.00187733682314 6.27272117277907 Q9UN37 VPS4A Q9UN37.S95.p_VPS4A Q9UN37_S95sS97sS99s_3_3_95_99 Q9UN37 Q9UN37 Vacuolar protein sorting-associated protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8794.8794.5 15.5 15.5 3.583 4 3 3 0 679.5022 3153.5954 S95s S97s S99s TMT10 87 (K) ENQSEGKGsDsDsEGDNPEKK (K) ENQS(0.0)EGKGS(0.99)DS(0.99)DS(0.99)EGDNPEKK K:TMT10,s:Phosphorylated S VPS4A 49182.3 8 4 1671.1 122.19 HUMAN 1 -10.116 29.5034 NQSKGMDSGFAGGED-p Q13573;S420-p NQSKGMDSGFAGGED 0.56732930889055 0.029932354601815 0.095 0.358 4.53331437324747 20.6223524251533 0.095 0.358 0.35210205734448 0.00866492399226872 1.01779595555146 4.00990308675973 Q13573 SNW1 Q13573.S420.p_SNW1 Q13573_S420s _1_1_420_420 Q13573 G3V3A4|Q13573|G3V4X8 SNW domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29801.29801.3 19.49 19.49 8.081 3 1 1 0 930.3963 2709.2089 S420s TMT10 417 (K) GMDsGFAGGEDEIYNVYDQAWR (G) GMDS(0.99)GFAGGEDEIY(0.0)NVY(0.0)DQAWR s:Phosphorylated S SNW1 61550.4 1 7 936.1 198.57 HUMAN 1 4.5333 20.6224 NQSLPKASPVTTSPT-p Q96JN0-3;S37-p NQSLPKASPVTTSPT 0.251905903014708 0.2797025160112 -0.22 0.122 11.4195228659438 7.28943276834054 -0.22 0.122 0.072118670741438 0.186662347444987 -2.22977643559835 1.51115286271939 Q96JN0 LCOR Q96JN0.3.S37.p_LCOR Q96JN0-3_S37s _1_1_37_37 Q96JN0-3 Q96JN0-3|Q96JN0-2 Isoform 3 of Ligand-dependent corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18585.18585.3 13.63 12.55 2.279 8 1 1 0 837.1159 2429.3652 S37s TMT10 36 (K) AsPVTTSPTAATTQNPVLSK (L) AS(0.99)PVT(0.0)T(0.0)S(0.0)PT(0.0)AAT(0.0)T(0.0)QNPVLS(0.0)K K:TMT10,s:Phosphorylated S LCOR 172300.7 1 3 673.1 247.79 HUMAN 1 -11.4195 7.2894 NQSRTLLSPQQQQQQ-p O14686-3;S3989-p NQSRTLLSPQQQQQQ 0.737585782043176 0.439641212584876 -0.0786666666666667 0.076 2.50597490730023 4.75376107672473 -0.0786666666666667 0.076 0.561568202981191 0.334675477989203 -0.618151196135401 1.05852895942806 O14686 KMT2D O14686.3.S3989.p_KMT2D O14686-3_S3989s _1_1_3989_3989 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31707.31707.5 18.41 16.87 2.33 6 1 1 0 1026.9685 5050.8483 S3989s TMT10 3986 (R) TLLsPQQQQQQQVALGPGMPAKPLQHFSSPGALGPTLLLTGK (E) T(0.0)LLS(0.99)PQQQQQQQVALGPGMPAKPLQHFS(0.0)S(0.0)PGALGPT(0.0)LLLT(0.0)GK K:TMT10,s:Phosphorylated S KMT2D 600227.3 1 38 17.1 1042.08 HUMAN 1 -2.506 4.7538 NQTNHKPSPDQIIQP-p X6RLX0;S1009-p NQTNHKPSPDQIIQP 0.241768222282956 0.260436068929505 0.177666666666667 -0.128333333333333 11.7903282022106 7.6988243241981 0.177666666666667 -0.128333333333333 0.0662166460996345 0.169870344514217 2.29519896406772 -1.58238516674676 X6RLX0 ERC1 X6RLX0.S1009.p_ERC1 X6RLX0_S1009s _1_1_1009_1009 X6RLX0 X6RLX0 ELKS/Rab6-interacting/CAST family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23644.23644.4 13.57 13.57 3.67 5 1 1 0 909.4665 3554.8716 S1009s TMT10 998 (K) SSHSNQTNHKPsPDQIIQPLLELDQNR (S) S(0.0)S(0.0)HS(0.0)NQT(0.0)NHKPS(0.99)PDQIIQPLLELDQNR K:TMT10,s:Phosphorylated S ERC1 128700.8 1 10 904.1 203.11 HUMAN 1 11.7903 -7.6988 NQTTIPVSPPSTTKP-p Q71RC2-4;S589-p NQTTIPVSPPSTTKP 0.453671703917619 0.00265649453361622 -0.0996666666666667 -0.678666666666667 6.33296533068797 39.1503408567734 -0.0996666666666667 -0.678666666666667 0.232650219668805 0.000121609055182398 -1.34366902883371 -9.75568536700782 Q71RC2 LARP4 Q71RC2.4.S589.p_LARP4 Q71RC2-4_S589s _1_1_589_589 Q71RC2-4 Q71RC2-4|Q71RC2-3|Q71RC2-5|Q71RC2-6|Q71RC2-2 Isoform 4 of La-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16000.16416.3 21.87 17.24 4.051 7 1 1 0 878.8012 2554.4241 S589s TMT10 579 (K) DGLNQTTIPVsPPSTTKPSR (A) DGLNQT(0.0)T(0.0)IPVS(0.99)PPS(0.0)T(0.0)T(0.0)KPS(0.0)R K:TMT10,s:Phosphorylated S LARP4 81926.9 16 4 841.1 214.37 HUMAN 1 -6.333 -39.1503 NQVANPNSAIFGGAR-p Q15056;S230-p NQVANPNSAIFGGAR 0.558908100806178 0.320273560676248 -0.0793333333333333 0.106666666666667 4.66200930322924 6.54044477812374 -0.0793333333333333 0.106666666666667 0.34182125918525 0.221796925718051 -1.04173876087081 1.37994906222717 Q15056 EIF4H Q15056.S230.p_EIF4H Q15056_S230s _1_1_230_230 Q15056 Q15056|Q15056-2 Eukaryotic translation initiation factor 4H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21939.21939.4 14.97 14.97 4.504 3 1 1 0 665.8533 2580.4208 S230s TMT10 217 (R) TVATPLNQVANPNsAIFGGARPR (E) T(0.0)VAT(0.0)PLNQVANPNS(0.99)AIFGGARPR s:Phosphorylated S EIF4H 27441.6 1 6 2065.1 99.65 HUMAN 1 -4.662 6.5404 NQVSRTESPQGLPTV-p P15822;S2599-p NQVSRTESPQGLPTV 0.459048178459949 0.487472189037364 0.113 -0.0666666666666666 6.23622785522859 4.16921903062748 0.113 -0.0666666666666666 0.237890563188257 0.382893590906455 1.32653852933798 -0.949175088539842 P15822 HIVEP1 P15822.S2599.p_HIVEP1 P15822_S2599s _1_1_2599_2599 P15822 P15822 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10762.10762.3 10.87 10.87 2.141 3 1 1 0 765.0688 2213.229 S2599s TMT10 2597 (R) TEsPQGLPTVQRENAK (K) T(0.0)ES(0.99)PQGLPT(0.0)VQRENAK K:TMT10,s:Phosphorylated S HIVEP1 299483.8 3 33 82.1 631.69 HUMAN 1 6.2362 -4.1692 NQVTQRASRRSDSAS-p Q05655-2;S299-p NQVTQRASRRSDSAS 0.466993254295347 0.181331576022535 0.152333333333333 -0.157 6.10419953176328 9.75297464238314 0.152333333333333 -0.157 0.245233641361821 0.105852845181576 1.30310466530295 -1.93806187613221 Q05655 PRKCD Q05655.2.S299.p_PRKCD Q05655-2_S299s _1_1_299_299 Q05655-2 Q05655-2 Isoform 2 of Protein kinase C delta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25308.25308.2 13.31 11.35 2.127 2 1 1 0 990.0339 1899.0973 S299s TMT10 286 (K) LLAEALNQVTQRAsR (R) LLAEALNQVT(0.0)QRAS(0.99)R s:Phosphorylated S PRKCD 82263.9 7 4 687.1 243.52 HUMAN 1 6.1042 -9.753 NRANIENTESFTLLI-p A0A0A0MTS7;T23394-p NRANIENTESFTLLI 0.421883877305009 0.568662466865634 0.124666666666667 0.105333333333333 6.90272389100414 3.30303556616604 0.124666666666667 0.105333333333333 0.204045777000888 0.467408325051956 1.44397457102118 0.781201774393761 A0A0A0MTS7 TTN A0A0A0MTS7.T23394.p_TTN A0A0A0MTS7_T23394tS23396sT23398t_3_3_23394_23398 A0A0A0MTS7 Q8WZ42-12|A0A0A0MTS7 Titin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32626.32626.3 9.29 3.04 8.408 5 3 3 0 1090.4771 3027.5295 N23390n N23393n T23394t S23396s T23398t Hydrogen 23389 (R) AnIEntEsFtLLIIPECNRYDTGK (F) AN(0.99)IEN(0.99)T(0.99)ES(0.99)FT(0.99)LLIIPECN(0.0)RY(0.0)DT(0.0)GK C:Carbamidomethylation,K:TMT10-Lys-Only,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S TTN 4024362.5 1 19 1796.1 114.24 HUMAN 1 6.9027 3.303 NRAPRRATPPAHPPP-p Q5SQI0;T261-p NRAPRRATPPAHPPP 0.223663787104468 0.661720217600159 0.283333333333333 -0.119666666666667 12.4976556655132 2.45519964399279 0.283333333333333 -0.119666666666667 0.0562644960648879 0.568172272234653 2.42092879873606 -0.60732882706636 Q5SQI0 ATAT1 Q5SQI0.T261.p_ATAT1 Q5SQI0_T261t _1_1_261_261 Q5SQI0 Q5SQI0|Q5SQI0-2|Q5SQI0-3 Alpha-tubulin N-acetyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3859.3859.3 13.26 13.26 99 1 1 1 0 502.6031 1425.8276 T261t TMT10 259 (R) RAtPPAHPPPR (S) RAT(1.0)PPAHPPPR t:Phosphorylated T ATAT1 47037.5 1 1 3389.1 52.22 HUMAN 1 12.4977 -2.4552 NRAVSQGTPYNPDGQ-p U3KPR8;T346-p NRAVSQGTPYNPDGQ 0.301224036518654 0.369324271086515 0.238666666666667 -0.146333333333333 9.78207765956115 5.7380314490055 0.238666666666667 -0.146333333333333 0.105145873689175 0.266806776053552 1.94387357237165 -1.23746960465998 U3KPR8 NotFound U3KPR8.T346.p_NotFound U3KPR8_S343sT346t_2_2_343_346 U3KPR8 U3KPR8 Homeobox protein Meis1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.38328.38543.4 8.96 0.34 1.447 3 2 2 0 1020.4702 3886.9191 S343s T346t M355m M366m TMT10 341 (R) AVsQGtPYNPDGQPmGGFVMDGQQHmGIRAPGK (T) AVS(0.99)QGT(0.99)PY(0.0)NPDGQPM(0.99)GGFVM(0.0)DGQQHM(0.99)GIRAPGK K:TMT10,s:Phosphorylated S,t:Phosphorylated T,m:Oxidized methionine MEIS1 42089.2 1 2 4238.1 34.97 HUMAN 1 9.7821 -5.738 NRDIEISTEEEKDTG-p Q4G0J3-3;T345-p NRDIEISTEEEKDTG 0.415208568890957 0.296929648642961 -0.243666666666667 0.165 7.0424946092764 6.96054421057683 -0.243666666666667 0.165 0.197583438491885 0.20134719276659 -1.46844963808403 1.45370554599242 Q4G0J3 LARP7 Q4G0J3.3.T345.p_LARP7 Q4G0J3-3_S344sT345t_2_2_344_345 Q4G0J3-3 Q4G0J3-3 Isoform 3 of La-related protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22955.22955.5 14.68 10.45 4.283 5 2 2 0 663.3346 3152.7029 S344s T345t Hydrogen 340 (R) DIEIstEEEKDTGDLKDSSLLK (T) DIEIS(0.99)T(0.99)EEEKDT(0.0)GDLKDS(0.0)S(0.0)LLK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T LARP7 67937.6 17 10 784.1 225.55 HUMAN 1 -7.0425 6.9605 NREDCFESESEDEFY-p Q96D09;S328-p NREDCFESESEDEFY 0.642460924098412 0.805617144495997 -0.0933333333333333 -0.037 3.59186444866811 1.31474233764702 -0.0933333333333334 -0.0370000000000001 0.437334314968622 0.738798093808056 -0.838263263838087 -0.351029600846366 Q96D09 GPRASP2 Q96D09.S328.p_GPRASP2 Q96D09_S328s _1_1_328_328 Q96D09 Q96D09 G-protein coupled receptor-associated sorting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15764.15764.3 15.89 15.89 1.162 4 1 1 0 908.3918 2643.1921 S328s TMT10 320 (R) TNREDCFEsESEDEFYK (Q) T(0.0)NREDCFES(0.99)ES(0.0)EDEFY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GPRASP2 94342.1 3 3 1724.1 119.44 HUMAN 1 -3.5919 -1.3147 NREKVAASPKSPTAA-p Q53EZ4;S425-p NREKVAASPKSPTAA 0.988584981739742 0.00275466353441747 0.00233333333333332 -0.764666666666667 0.102586061594977 38.7641195044488 0.00233333333333332 -0.764666666666667 0.976655485871544 0.000132919301251969 0.0306393753197295 -9.58913851087572 Q53EZ4 CEP55 Q53EZ4.S425.p_CEP55 Q53EZ4_S425s _1_1_425_425 Q53EZ4 Q53EZ4 Centrosomal protein of 55 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21450.21450.3 16.91 16.91 1.692 4 1 1 0 979.5294 2856.6108 S425s TMT10 422 (K) VAAsPKSPTAALNESLVECPK (C) VAAS(0.99)PKS(0.0)PT(0.0)AALNES(0.0)LVECPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CEP55 54519.6 3 2 2677.1 74.29 HUMAN 1 0.1026 -38.7641 NREPLMPSPQFIKSY-p O94826;S253-p NREPLMPSPQFIKSY 0.395304354889455 0.118404967818452 0.145666666666667 0.178333333333333 7.43844752098601 12.2178980359677 0.145666666666667 0.178333333333333 0.180366238353602 0.0600081442462485 1.53756364244066 2.36983649038784 O94826 TOMM70A O94826.S253.p_TOMM70A O94826_S253s _1_1_253_253 O94826 O94826 Mitochondrial import receptor subunit TOM70 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20768.20768.3 8.23 8.23 99 1 1 1 0 699.0429 2015.1512 S253s TMT10 246 (K) NREPLMPsPQFIK (S) NREPLMPS(1.0)PQFIK K:TMT10,s:Phosphorylated S TOMM70 68138.3 1 5 776.1 227.2 HUMAN 1 7.4384 12.2179 NRERHPGSFDVVHVK-p P62701;S204-p NRERHPGSFDVVHVK 0.729757185802638 0.240957228886928 0.0513333333333333 -0.133666666666667 2.59709011758239 8.14294080358716 0.0513333333333333 -0.133666666666667 0.549909203466067 0.153357817625661 0.637317462386248 -1.65941238858369 P62701 RPS4X P62701.S204.p_RPS4X P62701_S204s _1_1_204_204 P62701 P62701|P22090 40S ribosomal protein S4, X isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10363.10363.4 13 10.37 99 1 1 1 0 512.0242 1965.1071 S204s TMT10 199 (R) ERHPGsFDVVHVK (D) ERHPGS(1.0)FDVVHVK K:TMT10,s:Phosphorylated S RPS4X 29825.4 2 3 2942.1 65.29 HUMAN 1 2.5971 -8.1429 NREYFRFSVGGMTDV-p P36776;S548-p NREYFRFSVGGMTDV 0.248033262256709 0.0199274763775543 0.178666666666667 0.349666666666667 11.5657368536702 23.3168067857269 0.178666666666667 0.349666666666667 0.0697310676354123 0.00465928548451616 2.25553663777788 4.62445033617354 P36776 LONP1 P36776.S548.p_LONP1 P36776_S548s _1_1_548_548 P36776 P36776|P36776-2|K7EKE6|K7EJE8|P36776-3 Lon protease homolog, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27909.27909.3 11.82 11.1 3.597 2 1 1 0 631.3268 1811.9977 S548s TMT10 547 (R) FsVGGMTDVAEIK (G) FS(0.99)VGGMT(0.0)DVAEIK K:TMT10,s:Phosphorylated S LONP1 107000.9 1 3 4020.1 38.99 HUMAN 1 11.5657 23.3168 NRFGGSGSQVDSARM-p Q13200;S363-p NRFGGSGSQVDSARM 0.383105758171724 0.708658585868283 -0.185333333333333 -0.0566666666666666 7.71337861556847 2.05625293968835 -0.185333333333333 -0.0566666666666667 0.169302019449591 0.6228374328916 -1.58539648557645 -0.521162789041019 Q13200 PSMD2 Q13200.S363.p_PSMD2 Q13200_S363s _1_1_363_363 Q13200 Q13200|Q13200-3|Q13200-2 26S proteasome non-ATPase regulatory subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8453.8453.2 12.43 9.62 1.899 3 1 1 0 738.8375 1396.7018 S363s TMT10 358 (R) FGGSGsQVDSAR (M) FGGS(0.0)GS(0.99)QVDS(0.0)AR s:Phosphorylated S PSMD2 100939.6 1 7 539.1 277.07 HUMAN 1 -7.7134 -2.0563 NRFLMRKSPPKADEK-p Q13427;S290-p NRFLMRKSPPKADEK 0.233628206047255 0.0422530966569273 0.177666666666667 0.341 12.1162856144877 18.4069272084322 0.177666666666667 0.341 0.0614287161244845 0.0144313606168963 2.35297751901169 3.54210994581843 Q13427 PPIG Q13427.S290.p_PPIG Q13427_S290s _1_1_290_290 Q13427 Q13427|E9PG73|Q13427-2 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4583.4583.3 11.41 2.6 99 1 1 1 0 589.6731 1687.0357 S290s Hydrogen 289 (R) KsPPKADEK (E) KS(1.0)PPKADEK K:TMT10-Lys-Only,s:Phosphorylated S PPIG 89129.1 21 2 112.1 571.91 HUMAN 1 12.1163 18.4069 NRFTRRASVCAEAYN-p P31323;S114-p NRFTRRASVCAEAYN 0.252387161463081 0.0171821089613678 -0.166333333333333 0.399 11.4081871147263 24.3485043200155 -0.166333333333333 0.399 0.0723071574015193 0.0036740881175097 -2.22778121380571 4.87476426057937 P31323 PRKAR2B P31323.S114.p_PRKAR2B P31323_S114s _1_1_114_114 P31323 P31323 cAMP-dependent protein kinase type II-beta regulatory subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9269.9269.2 16.35 13.37 4.714 3 1 1 0 1361.5659 2642.1474 S114s TMT10 112 (R) RAsVCAEAYNPDEEEDDAESR (I) RAS(0.99)VCAEAY(0.0)NPDEEEDDAES(0.0)R C:Carbamidomethylation,s:Phosphorylated S PRKAR2B 46700.6 2 2 3065.1 61.65 HUMAN 1 -11.4082 24.3485 NRFYRRLSALVWEVR-p Q9NSI6-2;S1223-p NRFYRRLSALVWEVR 0.862862636836978 0.150405995099755 0.0266666666666667 0.155 1.24927101602384 10.8243624760498 0.0266666666666667 0.155 0.750020093212538 0.0827110915663639 0.335287388601569 2.12442655831068 Q9NSI6 BRWD1 Q9NSI6.2.S1223.p_BRWD1 Q9NSI6-2_S1223s _1_1_1223_1223 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23626.23626.3 11.38 11.38 99 1 1 1 0 513.2877 1457.879 S1223s TMT10 1221 (R) RLsALVWEVR (Y) RLS(1.0)ALVWEVR s:Phosphorylated S BRWD1 259915.1 1 8 208.1 444.81 HUMAN 1 1.2493 10.8244 NRGDIPASISLSEID-p Q14D04;S476-p NRGDIPASISLSEID 0.677572033046536 0.186049682485734 0.0566666666666667 -0.144333333333333 3.16480326260061 9.60565222854767 0.0566666666666667 -0.144333333333333 0.482524838161894 0.109505208680999 0.753691459921243 -1.91253325594185 Q14D04 VEPH1 Q14D04.S476.p_VEPH1 Q14D04_S476sS478s_2_2_476_478 Q14D04 Q14D04|Q14D04-2 Ventricular zone-expressed PH domain-containing protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28554.28554.5 23.22 17.06 2.123 6 2 2 0 1059.111 5131.5911 S476s S478s TMT10 459 (K) GVGSDDGEDENRGDIPAsIsLSEIDPLGQGNDKLPFKTDTER (S) GVGS(0.0)DDGEDENRGDIPAS(0.99)IS(0.99)LS(0.0)EIDPLGQGNDKLPFKT(0.0)DT(0.0)ER K:TMT10,s:Phosphorylated S VEPH1 95542.4 7 14 341.1 353.64 HUMAN 1 3.1648 -9.6057 NRGLDDST_______-p Q6XUX3;T929-p NRGLDDST_______ 0.149024470822507 0.0106397962711193 0.248666666666667 0.467 16.6757848531864 27.6696592251245 0.248666666666667 0.467 0.0214991611327243 0.00171014949895477 3.19904776098702 5.74508618523778 Q6XUX3 DSTYK Q6XUX3.T929.p_DSTYK Q6XUX3_T929t _1_1_929_929 Q6XUX3 Q6XUX3|Q6XUX3-2|Q6XUX3-3 Dual serine/threonine and tyrosine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5699.5699.2 14.8 11.57 1.259 4 1 1 0 914.9016 1748.8249 T929t TMT10 916 (K) SNSEQPNRGLDDSt (-) S(0.0)NS(0.0)EQPNRGLDDS(0.0)T(0.99) t:Phosphorylated T DSTYK 106687.2 2 1 5190.1 22.01 HUMAN 1 16.6758 27.6697 NRGLNNDSPERRRRP-p Q7Z6B7;S906-p NRGLNNDSPERRRRP 0.49174697393064 0.0382829745544336 0.106666666666667 -0.255333333333333 5.67488375060234 19.0363559536676 0.106666666666667 -0.255333333333333 0.270714566623767 0.0124843059889526 1.2264228457554 -3.67189923667225 Q7Z6B7 SRGAP1 Q7Z6B7.S906.p_SRGAP1 Q7Z6B7_S906s _1_1_906_906 Q7Z6B7 Q7Z6B7|Q7Z6B7-2|G5EA48 SLIT-ROBO Rho GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4228.4228.3 9.51 9.51 99 1 1 1 0 489.5703 1386.7287 S906s TMT10 901 (R) GLNNDsPERR (R) GLNNDS(1.0)PERR s:Phosphorylated S SRGAP1 125175 2 4 1722.1 119.46 HUMAN 1 5.6749 -19.0364 NRHFRHDTPDSSPRR-p Q9BRD0;T123-p NRHFRHDTPDSSPRR 0.748530975556737 0.293263694169699 -0.0636666666666667 0.128333333333333 2.39056422001671 7.03185636192047 -0.0636666666666667 0.128333333333333 0.576691536802304 0.198068021668819 -0.593657576001729 1.46618143424189 Q9BRD0 BUD13 Q9BRD0.T123.p_BUD13 Q9BRD0_T123t _1_1_123_123 Q9BRD0 Q9BRD0|Q9BRD0-2 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3144.3144.4 13.58 13.58 3.94 3 1 1 0 440.9578 1680.8404 T123t TMT10 118 (R) HFRHDtPDSSPR (R) HFRHDT(0.99)PDS(0.0)S(0.0)PR t:Phosphorylated T BUD13 70576.6 3 2 171.1 490.08 HUMAN 1 -2.3906 7.0319 NRHKLSHSDEKPFEC-p Q14119;S197-p NRHKLSHSDEKPFEC 0.203551476526078 0.0946578979092063 -0.262666666666667 -0.251 13.3940031795258 13.5394598971821 -0.262666666666667 -0.251 0.0457719781602416 0.0442643417522478 -2.58231251245552 -2.60724221818306 Q14119 VEZF1 Q14119.S197.p_VEZF1 Q14119_S197s _1_1_197_197 Q14119 Q14119|J3QSH4 Vascular endothelial zinc finger 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9943.9943.5 15.93 15.93 2.398 2 1 1 0 630.7195 3069.5966 S197s TMT10 192 (R) HKLSHsDEKPFECPICNQR (F) HKLS(0.0)HS(0.99)DEKPFECPICNQR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S VEZF1 57957.2 3 2 3291.1 54.81 HUMAN 1 -13.394 -13.5395 NRHKLSHSDEKPYQC-p P56270;S302-p NRHKLSHSDEKPYQC 0.0999757381136509 0.0309306332300873 -0.544333333333333 -0.523 21.1657686426768 20.4012964439144 -0.544333333333333 -0.523 0.00764580356049035 0.00911738629026212 -4.13372432112727 -3.96180455533344 P56270 MAZ P56270.S302.p_MAZ P56270_S302s _1_1_302_302 P56270 P56270-2|P56270-3|A0A087WWR2 Myc-associated zinc finger protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9022.9022.4 18.99 9.6 2.251 3 1 1 0 668.3193 2590.2906 S302s TMT10 299 (K) LSHsDEKPYQCPVCQQR (F) LS(0.0)HS(0.99)DEKPY(0.0)QCPVCQQR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MAZ 49576.7 4 1 3761.1 43.73 HUMAN 1 -21.1658 -20.4013 NRHNQGDSDDDVEET-p Q9P2K3-3;S214-p NRHNQGDSDDDVEET 0.879897888357523 0.0144832167858916 -0.0326666666666667 0.486333333333333 1.09357694592384 25.4861847994822 -0.0326666666666667 0.486333333333333 0.777396006655247 0.0028273626725537 -0.297189266685261 5.16136981313138 Q9P2K3 RCOR3 Q9P2K3.3.S214.p_RCOR3 Q9P2K3-3_S214s_1_1_214_214 Q9P2K3-3 Q9P2K3-3|Q9P2K3-4|Q9P2K3-2|B4DV59 Isoform 3 of REST corepressor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7921.7921.5 23.78 23.78 5.31 4 1 1 0 769.5367 3747.692 S214s M224m TMT10 209 (R) HNQGDsDDDVEETHPmDGNDSDYDPKK (E) HNQGDS(0.99)DDDVEET(0.0)HPM(1.0)DGNDS(0.0)DY(0.0)DPKK K:TMT10,s:Phosphorylated S,m:Oxidized methionine RCOR3 61384.5 16 4 1817.1 112.96 HUMAN 1 -1.0936 25.4862 NRIHRRISMEDLNKR-p Q00537-2;S137-p NRIHRRISMEDLNKR 0.563005808318766 0.759411762865062 -0.0816666666666667 0.0406666666666667 4.59520084966011 1.65081404810251 -0.0816666666666667 0.0406666666666667 0.347120222128389 0.683783465868263 -1.02932507765726 0.429957456693968 Q00537 CDK17 Q00537.2.S137.p_CDK17 Q00537-2_S137s _1_1_137_137 Q00537-2 Q00537|Q00537-2|F5H6Z0 Isoform 2 of Cyclin-dependent kinase 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11423.11423.4 9.54 6.61 99 1 1 1 0 450.7456 1719.994 S137s TMT10 135 (R) RIsMEDLNKR (L) RIS(1.0)MEDLNKR K:TMT10,s:Phosphorylated S CDK17 59872.4 6 14 672.2 248.68 HUMAN 1 -4.5952 1.6508 NRIISHFSQDDLTAL-p Q8N3C0;S142-p NRIISHFSQDDLTAL 0.565856073226583 0.706013143400195 0.0793333333333333 -0.0493333333333333 4.55609895645321 2.07620411916068 0.0793333333333333 -0.0493333333333333 0.350259645958817 0.619982724228234 1.0220440073799 -0.525550741760027 Q8N3C0 ASCC3 Q8N3C0.S142.p_ASCC3 Q8N3C0_S142s _1_1_142_142 Q8N3C0 Q8N3C0|Q8N3C0-4 Activating signal cointegrator 1 complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33294.33294.3 17.01 17.01 3.062 4 1 1 0 905.4658 2634.4213 S142s TMT10 137 (R) IISHFsQDDLTALVQMTEK (E) IIS(0.0)HFS(0.99)QDDLT(0.0)ALVQMT(0.0)EK K:TMT10,s:Phosphorylated S ASCC3 253053.3 2 1 2896.1 66.62 HUMAN 1 4.5561 -2.0762 NRINKAVSEEQQPAL-p Q8NE71;S166-p NRINKAVSEEQQPAL 0.683630915493581 0.935467438969071 -0.0623333333333333 -0.0083333333333333 3.09632534998656 0.408996676074956 -0.0623333333333333 -0.0083333333333333 0.490193406116236 0.910123508602894 -0.739910067085233 -0.118254510976608 Q8NE71 ABCF1 Q8NE71.S166.p_ABCF1 Q8NE71_S166s _1_1_166_166 Q8NE71 Q8NE71|Q8NE71-2 ATP-binding cassette sub-family F member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12490.12490.2 14.17 12.54 99 1 1 1 0 869.4632 1657.9525 S166s TMT10 164 (K) AVsEEQQPALK (G) AVS(1.0)EEQQPALK K:TMT10,s:Phosphorylated S ABCF1 96380.4 3 4 203.1 449.36 HUMAN 1 -3.0963 -0.409 NRIRSTRSVENLPEC-p Q9UBF8-2;S413-p NRIRSTRSVENLPEC 0.842179784254459 0.458821212352781 0.032 0.0713333333333333 1.44203616518408 4.51076188514388 0.032 0.0713333333333334 0.717457836344938 0.353935244586589 0.381356726200234 1.01339905174753 Q9UBF8 PI4KB Q9UBF8.2.S413.p_PI4KB Q9UBF8-2_S413s _1_1_413_413 Q9UBF8-2 A0A0B4J1S8|Q9UBF8|Q9UBF8-2|Q9UBF8-3 Isoform 2 of Phosphatidylinositol 4-kinase beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8719.8719.2 24.52 17.24 21.001 2 1 1 0 924.9017 1768.8283 S413s Hydrogen 413 (R) sVENLPECGITHEQR (A) S(0.99)VENLPECGIT(0.0)HEQR C:Carbamidomethylation,s:Phosphorylated S PI4KB 90547.4 7 7 325.1 361.79 HUMAN 1 1.442 4.5108 NRISPMLSPFISSVV-p Q9NXR7-1;S15-p NRISPMLSPFISSVV 0.565711149743452 0.328979915302619 0.081 0.180333333333333 4.55937545826574 6.39266386879823 0.0793146279847197 0.180333333333333 0.349995494878736 0.229474067184951 1.02265456394082 1.35388263514394 Q9NXR7 BRE Q9NXR7.1.S15.p_BRE Q9NXR7-1_S15s _1_1_15_15 Q9NXR7-1 Q9NXR7-1|Q9NXR7-3|Q9NXR7-4 Isoform 1 of BRISC and BRCA1-A complex member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36856.36856.3 14.47 14.47 4.431 4 1 1 0 614.6659 1762.0134 S15s TMT10 10 (R) ISPMLsPFISSVVR (N) IS(0.0)PMLS(0.99)PFIS(0.0)S(0.0)VVR s:Phosphorylated S BABAM2 47601.2 2 1 2860.1 67.94 HUMAN 1 4.5594 6.3927 NRIYASSSPPDTGQR-p Q9UGJ0-3;S152-p NRIYASSSPPDTGQR 0.727734605075944 0.0358969917883266 -0.064 -0.275333333333333 2.61882770545636 19.4486404943874 -0.064 -0.275333333333333 0.547163639277514 0.0113536617250523 -0.641868435661447 -3.75821544511538 Q9UGJ0 PRKAG2 Q9UGJ0.3.S152.p_PRKAG2 Q9UGJ0-3_S152s _1_1_152_152 Q9UGJ0-3 Q9UGJ0|Q9UGJ0-3|E9PGP6|F8WDA1 Isoform C of 5'-AMP-activated protein kinase subunit gamma-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10053.10053.2 11.33 11.33 1.169 5 1 1 0 844.4015 1607.8227 S152s TMT10 147 (R) IYASSsPPDTGQR (F) IY(0.0)AS(0.0)S(0.0)S(0.99)PPDT(0.0)GQR s:Phosphorylated S PRKAG2 58609 2 6 2725.1 72.63 HUMAN 1 -2.6188 -19.4486 NRKLQQFSPLSDYEG-p Q9UK61;S633-p NRKLQQFSPLSDYEG 0.953497372992588 0.0820618228869866 -0.012 0.231 0.407444988353807 14.3912861166866 -0.012 0.231 0.910448744093746 0.0363807282534953 -0.117835134959745 2.7633326233402 Q9UK61 FAM208A Q9UK61.S633.p_FAM208A Q9UK61_S633s_1_1_633_633 Q9UK61 Q9UK61|Q9UK61-4|Q9UK61-3|Q9UK61-2|A0A087X0F1 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25776.25776.3 19.2 19.2 1.111 4 1 1 0 990.4581 2888.4024 S633s N646n TMT10 629 (K) LQQFsPLSDYEGQEEEMnGTK (M) LQQFS(0.99)PLS(0.0)DY(0.0)EGQEEEMN(1.0)GT(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated FAM208A 190568.5 3 3 246.1 411.17 HUMAN 1 -0.4074 14.3913 NRKRRRDSDGVDGFE-p Q96KR1;S1054-p NRKRRRDSDGVDGFE 0.0291289577020664 0.0425345947088787 -0.753 -0.277 35.9177629721523 18.3712084509283 -0.753 -0.277 0.000255990414041255 0.0145505414654125 -8.4552488382054 -3.53481477367949 Q96KR1 ZFR Q96KR1.S1054.p_ZFR Q96KR1_S1054s _1_1_1054_1054 Q96KR1 Q96KR1 Zinc finger RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8006.8006.4 17.4 17.4 99 1 1 1 0 576.7908 2224.1722 S1054s Hydrogen 1051 (R) RRDsDGVDGFEAEGKK (D) RRDS(1.0)DGVDGFEAEGKK K:TMT10-Lys-Only,s:Phosphorylated S ZFR 118151.1 18 5 1692.1 120.73 HUMAN 1 -35.9178 -18.3712 NRKSPNLSKCGEELG-p R4GMR5;S47-p NRKSPNLSKCGEELG 0.514261110164851 0.0398375015830512 0.146333333333333 -0.351333333333333 5.33632323339343 18.7729933326649 0.146333333333333 -0.351333333333333 0.29266290333532 0.0132647987917097 1.16534951584466 -3.61730600849497 R4GMR5 NotFound R4GMR5.S47.p_NotFound R4GMR5_S47s _1_1_47_47 R4GMR5 P48556|R4GMR5|K7ENY6 26S proteasome non-ATPase regulatory subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8190.8190.3 7.12 7.12 7.121 2 1 1 0 514.3071 1460.9404 S47s TMT10 42 (R) KSPNLsK (C) KS(0.0)PNLS(0.99)K K:TMT10,s:Phosphorylated S PSMD8 32722.1 1 3 3400.1 51.99 HUMAN 1 5.3363 -18.773 NRLGSGGSGDGPSVS-p Q9Y6R9;S376-p NRLGSGGSGDGPSVS 0.839385853056381 0.0189613448383213 -0.0326666666666667 -0.473 1.46921434383525 23.6846523906424 -0.0326666666666667 -0.473 0.712981999768638 0.00428089682518519 -0.387760356012582 -4.71268675958951 Q9Y6R9 CCDC61 Q9Y6R9.S376.p_CCDC61 Q9Y6R9_S376s _1_1_376_376 Q9Y6R9 Q9Y6R9|Q9Y6R9-2 Coiled-coil domain-containing protein 61 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16226.16226.2 17.32 11.12 3.496 5 1 1 0 907.9182 1734.8608 S376s TMT10 371 (R) LGSGGsGDGPSVSWSR (Q) LGS(0.0)GGS(0.99)GDGPS(0.0)VS(0.0)WS(0.0)R s:Phosphorylated S CCDC61 57595.5 2 2 2443.1 83.27 HUMAN 1 -1.4692 -23.6847 NRLQRRLSQAEERAA-p Q96NL6;S656-p NRLQRRLSQAEERAA 0.752880589938391 0.0429617188479736 -0.0543333333333333 -0.249333333333333 2.35205139618165 18.316535073336 -0.0543333333333333 -0.249333333333333 0.581828325413441 0.0147348762453195 -0.585428108124375 -3.52366263354873 Q96NL6 SCLT1 Q96NL6.S656.p_SCLT1 Q96NL6_S656s _1_1_656_656 Q96NL6 Q96NL6|Q96NL6-2|D6RBP0|Q96NL6-3 Sodium channel and clathrin linker 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4840.4840.3 7.28 2.94 99 1 1 1 0 433.2201 1217.68 S656s TMT10 654 (R) RLsQAEER (A) RLS(1.0)QAEER s:Phosphorylated S SCLT1 81251.3 1 1 5085.1 23.14 HUMAN 1 -2.3521 -18.3165 NRLQTKASPGSSSYL-p Q2LD37;S3196-p NRLQTKASPGSSSYL 0.716278239111013 0.0511022465675881 -0.051 0.239333333333333 2.73343183469227 17.2469059706008 -0.051 0.239333333333333 0.532913615849742 0.0188499152933909 -0.665728981226928 3.30885711808106 Q2LD37 KIAA1109 Q2LD37.S3196.p_KIAA1109 Q2LD37_S3196s _1_1_3196_3196 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7|Q2LD37-6 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12717.12717.2 12.13 5.8 1.364 5 1 1 0 767.9003 1454.8255 S3196s TMT10 3195 (K) AsPGSSSYLK (L) AS(0.99)PGS(0.0)S(0.0)S(0.0)Y(0.0)LK K:TMT10,s:Phosphorylated S KIAA1109 559693.9 3 19 143.1 520.8 HUMAN 1 -2.7334 17.2469 NRMQTNQTPPTYNKT-p Q93050;T360-p NRMQTNQTPPTYNKT 0.539507901385774 0.420826921348439 0.0823333333333333 -0.086 4.95099165771826 5.00348517255286 0.0823333333333333 -0.086 0.319816476495578 0.315974097992274 1.09506935647381 -1.10447338498887 Q93050 ATP6V0A1 Q93050.T360.p_ATP6V0A1 Q93050_T360t _1_1_360_360 Q93050 Q93050-3|Q93050-1|B7Z2A9|B7Z641|F5H1T6 V-type proton ATPase 116 kDa subunit a isoform 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11700.11700.3 12.43 12.43 4.037 4 1 1 0 654.3257 1880.9941 T360t TMT10 355 (R) MQTNQtPPTYNK (T) MQT(0.0)NQT(0.99)PPT(0.0)Y(0.0)NK K:TMT10,t:Phosphorylated T ATP6V0A1 97209.7 1 2 5057.1 23.48 HUMAN 1 4.951 -5.0035 NRMSPSKSPFLPSMK-p Q8NFD5-3;S1612-p NRMSPSKSPFLPSMK 0.708406987435684 0.0507442801508768 -0.0763333333333333 0.438 2.81406601899521 17.2926531087906 -0.0763333333333334 0.438 0.523110452689482 0.0186523986604362 -0.682387189541567 3.31791662569034 Q8NFD5 ARID1B Q8NFD5.3.S1612.p_ARID1B Q8NFD5-3_S1612s _1_1_1612_1612 Q8NFD5-3 Q8NFD5-3|Q8NFD5-2|A0A1B0GVK1|Q8NFD5-4|A0A1B0GWJ2 Isoform 3 of AT-rich interactive domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21451.21451.3 12.44 12.44 1.409 4 1 1 0 735.3999 2124.2164 S1612s TMT10 1607 (R) MSPSKsPFLPSMK (M) MS(0.0)PS(0.0)KS(0.99)PFLPS(0.0)MK K:TMT10,s:Phosphorylated S ARID1B 242543.1 2 14 656.1 253.59 HUMAN 1 -2.8141 17.2927 NRNLDNVSPKDGSTP-p P78563;S26-p NRNLDNVSPKDGSTP 0.716278239111013 0.0619237436116897 -0.0856666666666667 0.359666666666667 2.73348131713766 16.0825503100441 -0.0856666666666667 0.359666666666667 0.532907543997631 0.0246459162861284 -0.665739236136089 3.08186531496615 P78563 ADARB1 P78563.S26.p_ADARB1 P78563_S26s _1_1_26_26 P78563 P78563-5|P78563-4|P78563-3|P78563-2|P78563-6 Double-stranded RNA-specific editase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12071.12071.3 18.78 17.82 3.367 5 1 1 0 1135.2146 3323.6616 S26s TMT10 21 (R) NLDNVsPKDGSTPGPGEGSQLSNGGGGGPGR (K) NLDNVS(0.99)PKDGS(0.0)T(0.0)PGPGEGS(0.0)QLS(0.0)NGGGGGPGR K:TMT10,s:Phosphorylated S ADARB1 81161.3 5 2 2835.1 68.55 HUMAN 1 -2.7335 16.0826 NRNQRKDSEGYSESP-p Q5VSL9;S59-p NRNQRKDSEGYSESP 0.0306969141455794 0.643929908189732 -0.785666666666667 0.072 35.3385971343227 2.60551587906081 -0.785666666666667 0.072 0.000292509709526368 0.548843357078322 -8.23587213466873 0.638999290665891 Q5VSL9 STRIP1 Q5VSL9.S59.p_STRIP1 Q5VSL9_S59s _1_1_59_59 Q5VSL9 Q5VSL9|Q5VSL9-4 Striatin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20123.20123.4 20.91 20.25 1.183 6 1 1 0 798.8739 3112.5089 S59s TMT10 57 (R) KDsEGYSESPDLEFEYADTDK (W) KDS(0.99)EGY(0.0)S(0.0)ES(0.0)PDLEFEY(0.0)ADT(0.0)DK K:TMT10,s:Phosphorylated S STRIP1 96315.8 3 1 2589.1 77.45 HUMAN 1 -35.3386 2.6055 NRNQRSSSFGSVSTS-p P57768;S29-p NRNQRSSSFGSVSTS 0.237133599542224 0.530324112477558 -0.197333333333333 0.061 11.9774495931584 3.70389559743086 -0.197333333333333 0.061 0.0634242062390227 0.426197050899086 -2.32833541004904 0.859950281915673 P57768 SNX16 P57768.S29.p_SNX16 P57768_S29s _1_1_29_29 P57768 P57768|A0A0C4DGW2|P57768-2 Sorting nexin-16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10416.10416.2 15.78 15.78 1.15 10 1 1 0 993.9748 1906.9758 S29s TMT10 27 (R) SSsFGSVSTSSNSSK (G) S(0.0)S(0.0)S(0.99)FGS(0.0)VS(0.0)T(0.0)S(0.0)S(0.0)NS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SNX16 39451.1 7 1 1686.1 120.98 HUMAN 1 -11.9774 3.7039 NRNSLDGSQEEKKKK-p Q9P2D1;S637-p NRNSLDGSQEEKKKK 0.591892051068078 0.0110966201982267 -0.0806666666666667 -0.467333333333333 4.19731377254753 27.3741132982234 -0.0806666666666667 -0.467333333333333 0.380424626364744 0.00183057981879273 -0.954663356495683 -5.66334619890031 Q9P2D1 CHD7 Q9P2D1.S637.p_CHD7 Q9P2D1_S637s _1_1_637_637 Q9P2D1 Q9P2D1|Q9P2D1-3|Q9P2D1-2 Chromodomain-helicase-DNA-binding protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18100.18100.5 14.1 10.91 4.49 2 1 1 0 764.7739 3739.8767 S637s TMT10 614 (K) GFGKDDFPGGVDNQELNRNSLDGsQEEK (K) GFGKDDFPGGVDNQELNRNS(0.0)LDGS(0.99)QEEK K:TMT10,s:Phosphorylated S CHD7 337747 3 4 256.1 399.25 HUMAN 1 -4.1973 -27.3741 NRPTPRVTVSKDRQS-p Q9H156;T316-p NRPTPRVTVSKDRQS 0.547622121984462 NA -0.3815 0.147 4.82801894079241 NA -0.3815 NA 0.329001672653614 NA -1.09669644135998 NA Q9H156 SLITRK2 Q9H156.T316.p_SLITRK2 Q9H156_T316tS318sS323s_3_3_316_323 Q9H156 Q9H156|Q9H156-2 SLIT and NTRK-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5774.5774.4 10.68 3.31 7.413 6 3 3 0 1035.0105 3880.1769 N309n T316t S318s S323s M328m TMT10 307 (K) MRnRPTPRVtVsKDRQsFGPImVYQTK (S) M(0.0)RN(1.0)RPT(0.0)PRVT(0.99)VS(0.99)KDRQS(0.99)FGPIM(0.99)VY(0.0)QT(0.0)K K:TMT10,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S,m:Oxidized methionine SLITRK2 96543.7 1 1 6600.1 10.68 HUMAN 1 -4.828 NA NRQKSLDSDLSDGPV-p Q14161;S418-p NRQKSLDSDLSDGPV 0.736926628232361 0.0276242665589748 0.058 0.286333333333333 2.51126420483371 21.134997981474 0.058 0.286333333333333 0.560884682145643 0.0077001680224734 0.619267865500101 4.12273826566853 Q14161 GIT2 Q14161.S418.p_GIT2 Q14161_S418s _1_1_418_418 Q14161 Q14161|Q14161-3|Q14161-5|Q14161-6|Q14161-9 ARF GTPase-activating protein GIT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.34587.34587.3 17.38 17.38 1.145 4 1 1 0 912.1128 2654.3635 S418s TMT10 415 (K) SLDsDLSDGPVTVQEFMEVK (N) S(0.0)LDS(0.99)DLS(0.0)DGPVT(0.0)VQEFMEVK K:TMT10,s:Phosphorylated S GIT2 85168.8 2 5 474.1 301.74 HUMAN 1 2.5113 21.135 NRQQFYHSVQDLSGG-p P10398;S157-p NRQQFYHSVQDLSGG 0.668345622694127 0.0499530681835299 0.0986666666666667 -0.245666666666667 3.27285790663926 17.3996698681576 0.0986666666666667 -0.245666666666667 0.470667498272113 0.0181983918964011 0.775308279898638 -3.33915298040081 P10398 ARAF P10398.S157.p_ARAF P10398_S157s _1_1_157_157 P10398 P10398|P10398-2 Serine/threonine-protein kinase A-Raf HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12011.12011.2 16.02 16.02 6.421 4 1 1 0 1009.4713 1937.9667 S157s TMT10 152 (R) QQFYHsVQDLSGGSR (Q) QQFY(0.0)HS(0.99)VQDLS(0.0)GGS(0.0)R s:Phosphorylated S ARAF 68382.9 2 14 441.3 311.96 HUMAN 1 3.2729 -17.3997 NRQTLTESMLEPVPE-p O95155-4;S1329-p NRQTLTESMLEPVPE 0.874804281963455 0.632798150668237 -0.043 0.0593333333333333 1.13671325699894 2.70053270357403 -0.043 0.0593333333333333 0.769712738936304 0.53696592834181 -0.307828479653112 0.658814608841862 O95155 UBE4B O95155.4.S1329.p_UBE4B O95155-4_S1329s _1_1_1329_1329 O95155-4 O95155-4|O95155-2|O95155-3 Isoform 4 of Ubiquitin conjugation factor E4 B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27353.27353.3 13.49 9.57 2.194 3 1 1 0 751.7349 2173.219 S1329s TMT10 1324 (R) QTLTEsMLEPVPELK (E) QT(0.0)LT(0.0)ES(0.99)MLEPVPELK K:TMT10,s:Phosphorylated S UBE4B 152984.7 1 10 989.1 191.62 HUMAN 1 -1.1367 2.7005 NRRGSVSSVSPKPPS-p Q9NZJ0;S488-p NRRGSVSSVSPKPPS 0.351928236415973 0.000993050805672115 -0.183666666666667 -1.34633333333333 8.42359383958834 52.6516182025126 -0.183666666666667 -1.34633333333333 0.143760844744806 5.43047951464151e-06 -1.70857521085066 -17.5962056455339 Q9NZJ0 DTL Q9NZJ0.S488.p_DTL Q9NZJ0_S488sS490s_2_2_488_490 Q9NZJ0 Q9NZJ0|F5GZ90 Denticleless protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13552.13552.4 10.19 10.19 1.161 6 2 2 0 624.3331 2334.3748 S488s S490s TMT10 483 (R) RGSVSsVsPKPPSSFK (M) RGS(0.0)VS(0.0)S(0.99)VS(0.99)PKPPS(0.0)S(0.0)FK K:TMT10,s:Phosphorylated S DTL 80892.7 7 16 461.1 305.23 HUMAN 1 -8.4236 -52.6516 NRRIRTLTEPSVDFN-p Q6R327-3;T1135-p NRRIRTLTEPSVDFN 0.442576911802471 0.679732527609055 -0.133666666666667 0.0403333333333334 6.52195288566622 2.29145803326673 -0.133666666666667 0.0403333333333334 0.222743331734807 0.590002968427403 -1.37704575729916 0.572351833126783 Q6R327 RICTOR Q6R327.3.T1135.p_RICTOR Q6R327-3_T1135t _1_1_1135_1135 Q6R327-3 Q6R327-3 Isoform 3 of Rapamycin-insensitive companion of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24105.24105.5 10.06 10.06 1.736 7 1 1 0 624.1111 3036.5566 T1135t TMT10 1133 (R) TLtEPSVDFNHSDDFTPISTVQK (T) T(0.0)LT(0.99)EPS(0.0)VDFNHS(0.0)DDFT(0.0)PIS(0.0)T(0.0)VQK K:TMT10,t:Phosphorylated T RICTOR 197118.3 7 4 452.1 308.36 HUMAN 1 -6.522 2.2915 NRRKRKGSDDDGGDS-p O75446;S131-p NRRKRKGSDDDGGDS 0.793394195441969 0.541099754492844 0.0393333333333333 -0.064 1.93947123805132 3.587620999404 0.0393333333333333 -0.064 0.639812729180482 0.437761838917178 0.495355392837476 -0.837302433370026 O75446 SAP30 O75446.S131.p_SAP30 O75446_S131s _1_1_131_131 O75446 O75446 Histone deacetylase complex subunit SAP30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28378.28378.4 22.71 22.71 2.745 5 1 1 0 982.73 3847.9238 S131s TMT10 129 (R) KGsDDDGGDSPVQDIDTPEVDLYQLQVNTLR (R) KGS(0.99)DDDGGDS(0.0)PVQDIDT(0.0)PEVDLY(0.0)QLQVNT(0.0)LR K:TMT10,s:Phosphorylated S SAP30 23591.1 8 1 2714.1 72.99 HUMAN 1 1.9395 -3.5876 NRRKVMDSDEDDDY_-p O14737;S119-p NRRKVMDSDEDDDY_ 0.228788306484068 0.456701822280499 0.193333333333333 0.0753333333333334 12.311413214592 4.53884276311878 0.193333333333333 0.0753333333333334 0.0587298211842633 0.351654131084681 2.38769553106966 1.01863697608442 O14737 PDCD5 O14737.S119.p_PDCD5 O14737_S119s _1_1_119_119 O14737 O14737|K7EQA1 Programmed cell death protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14390.15024.2 9.86 9.86 4.976 2 1 1 0 756.7675 1432.5623 S119s TMT10 116 (K) VMDsDEDDDY (-) VMDS(0.99)DEDDDY(0.0) s:Phosphorylated S PDCD5 14284.8 10 4 2922.1 65.91 HUMAN 1 12.3114 4.5388 NRRQFPPSPSAPKIP-p O75381;S232-p NRRQFPPSPSAPKIP 0.126572282263763 0.015501095983398 -0.282333333333333 -0.394333333333333 18.6366105630198 25.0213149599576 -0.282333333333333 -0.394333333333333 0.0136879668170127 0.00314679538087375 -3.59226853807731 -5.04287608646876 O75381 PEX14 O75381.S232.p_PEX14 O75381_S232s _1_1_232_232 O75381 O75381|O75381-2 Peroxisomal membrane protein PEX14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10483.10907.3 11.9 9.13 1.289 2 1 1 0 583.9862 1669.979 S232s TMT10 227 (R) RQFPPsPSAPK (I) RQFPPS(0.99)PS(0.0)APK K:TMT10,s:Phosphorylated S PEX14 41292.9 35 4 1445.1 141.13 HUMAN 1 -18.6366 -25.0213 NRRQYHESEEESEEE-p Q8N9N8;S155-p NRRQYHESEEESEEE 0.525170023338528 0.135907527250966 -0.289 0.191333333333333 5.17350227587665 11.4218642378395 -0.289 0.191333333333333 0.303843375686538 0.072079800544605 -1.13576032451466 2.22913879122046 Q8N9N8 EIF1AD Q8N9N8.S155.p_EIF1AD Q8N9N8_S155s _1_1_155_155 Q8N9N8 Q8N9N8|E9PNH5 Probable RNA-binding protein EIF1AD HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6282.6282.2 13.43 13.43 4.037 3 1 1 0 1052.9069 2024.8406 S155s TMT10 151 (R) QYHEsEEESEEEEAA (-) QY(0.0)HES(0.99)EEES(0.0)EEEEAA s:Phosphorylated S EIF1AD 19109.8 1 2 4527.1 30.32 HUMAN 1 -5.1735 11.4219 NRRSQSSSLLDMGNM-p Q9NV70-2;S476-p NRRSQSSSLLDMGNM 0.367137725804172 0.641557055510491 0.146666666666667 -0.0586666666666667 8.07796356046975 2.62616009589199 0.146666666666667 -0.0586666666666667 0.15566954066921 0.546240617532529 1.64868256359326 -0.64331764918743 Q9NV70 EXOC1 Q9NV70.2.S476.p_EXOC1 Q9NV70-2_S476s _1_1_476_476 Q9NV70-2 Q9NV70|Q9NV70-2 Isoform 2 of Exocyst complex component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25040.25040.3 16.27 16.27 1.127 6 1 1 0 870.0537 2528.1806 S476s TMT10 472 (R) SQSSsLLDMGNMSASDLDVADR (T) S(0.0)QS(0.0)S(0.0)S(0.99)LLDMGNMS(0.0)AS(0.0)DLDVADR s:Phosphorylated S EXOC1 101136.7 7 9 871.2 209.68 HUMAN 1 8.078 -2.6262 NRSNSVSSLDLEGES-p Q14C86-6;S588-p NRSNSVSSLDLEGES 0.188778224113783 0.136332819740827 0.215333333333333 0.156 14.185666670936 11.402505715283 0.215333333333333 0.156 0.0381446235248969 0.0724018108415955 2.7270713180841 2.22573520867667 Q14C86 GAPVD1 Q14C86.6.S588.p_GAPVD1 Q14C86-6_S588s _1_1_588_588 Q14C86-6 Q14C86-6|Q14C86-2|Q14C86-5|Q14C86-4|Q14C86-3|F8W9S7|B4DGD8|A0A0A0MQV8 Isoform 6 of GTPase-activating protein and VPS9 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.31106.31106.5 27.49 27.49 1.178 10 1 1 0 1073.9136 5285.5821 S588s TMT10 583 (R) SNSVSsLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDK (L) S(0.0)NS(0.0)VS(0.0)S(0.99)LDLEGES(0.0)VS(0.0)ELGAGPS(0.0)GS(0.0)NGVEALQLLEHEQAT(0.0)T(0.0)QDNLDDK K:TMT10,s:Phosphorylated S GAPVD1 167648.8 8 7 268.1 394.98 HUMAN 1 14.1857 11.4025 NRSSAFGTLNWFTKV-p Q4KMQ2-2;T181-p NRSSAFGTLNWFTKV 0.73402987705624 0.0209847407885133 -0.0663333333333333 0.481333333333333 2.54241865883384 22.9525436393876 -0.0663333333333333 0.481333333333334 0.556875529231415 0.00506693853489344 -0.625834928623896 4.53814860046643 Q4KMQ2 ANO6 Q4KMQ2.2.T181.p_ANO6 Q4KMQ2-2_T181t _1_1_181_181 Q4KMQ2-2 Q4KMQ2-2|Q4KMQ2-4|Q4KMQ2-3 Isoform 2 of Anoctamin-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30521.30521.3 10.45 10.45 3.796 4 1 1 0 632.9945 1816.9998 T181t TMT10 176 (R) SSAFGtLNWFTK (V) S(0.0)S(0.0)AFGT(0.99)LNWFT(0.0)K K:TMT10,t:Phosphorylated T ANO6 109514.5 1 2 3323.1 53.95 HUMAN 1 -2.5424 22.9525 NRSSQRHSPPFSKTL-p Q8WV28;S129-p NRSSQRHSPPFSKTL 0.801500649004146 0.0115066922288389 -0.041 0.398333333333333 1.85028990738314 27.1340383519322 -0.041 0.398333333333333 0.65308695525962 0.00193462219004158 -0.475386350973675 5.59759532126546 Q8WV28 BLNK Q8WV28.S129.p_BLNK Q8WV28_S129s _1_1_129_129 Q8WV28 Q8WV28|Q8WV28-2|Q8WV28-3 B-cell linker protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.6235.6235.3 13.59 7.54 3.218 4 1 1 0 599.3134 1715.9593 S129s TMT10 124 (R) SSQRHsPPFSK (T) S(0.0)S(0.0)QRHS(0.99)PPFS(0.0)K K:TMT10,s:Phosphorylated S BLNK 50636.6 8 1 1637.1 124.96 HUMAN 1 -1.8503 27.134 NRTAMRASQKDFENS-p O75521;S39-p NRTAMRASQKDFENS 0.787952750145453 0.0547153044363811 0.104 0.403 1.99645276454653 16.8187078653119 0.104 0.403 0.631472909067191 0.0208031554093295 0.508016336317965 3.22458811948821 O75521 ECI2 O75521.S39.p_ECI2 O75521_S39s _1_1_39_39 O75521 O75521|A0A0C4DGA2|F1LLU7|F8W6J1|F8WAW4 Enoyl-CoA delta isomerase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.4857.4857.3 8.11 8.11 8.114 2 1 1 0 477.5915 1350.7928 S39s TMT10 34 (R) TAMRAsQK (D) T(0.0)AMRAS(0.99)QK K:TMT10,s:Phosphorylated S ECI2 43983.7 1 1 2084.1 98.15 HUMAN 1 1.9965 16.8187 NRTDGSISGDRQPVT-p P51116;S603-p NRTDGSISGDRQPVT 0.444245028437086 0.61230886644641 0.121666666666667 0.072 6.49409381451361 2.89376958328287 0.121666666666667 0.072 0.224176775733891 0.513597666260169 1.37213272837413 0.69865577490293 P51116 FXR2 P51116.S603.p_FXR2 P51116_S601sS603s_2_2_601_603 P51116 P51116 Fragile X mental retardation syndrome-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18407.18407.3 13.42 13.42 1.892 6 2 2 0 766.3342 2137.052 S601s S603s Hydrogen 598 (R) TDGsIsGDRQPVTVADYISR (A) T(0.0)DGS(0.99)IS(0.99)GDRQPVT(0.0)VADY(0.0)IS(0.0)R s:Phosphorylated S FXR2 74564.3 7 11 844.1 213.98 HUMAN 1 6.4941 2.8938 NRVMEKGSLKCAQYW-p P18031;S118-p NRVMEKGSLKCAQYW 0.221440669353428 0.00161667139673784 -0.306666666666667 -0.853333333333333 12.6012792997565 44.6454376677074 -0.306666666666667 -0.853333333333334 0.054937901963191 3.43128058735819e-05 -2.43946164756461 -12.4320064457146 P18031 PTPN1 P18031.S118.p_PTPN1 P18031_S118s _1_1_118_118 P18031 P18031|B4DSN5 Tyrosine-protein phosphatase non-receptor type 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13031.13031.2 11.66 3.81 99 1 1 1 0 829.9809 1578.9856 S118s TMT10 113 (R) VMEKGsLK (C) VMEKGS(1.0)LK K:TMT10,s:Phosphorylated S PTPN1 50536.5 3 2 1124.1 174.81 HUMAN 1 -12.6013 -44.6454 NRVNFRGSLNTYRFC-p P52657;S61-p NRVNFRGSLNTYRFC 0.488703298869237 0.0105241499825465 -0.093 0.513 5.72719824575083 27.7500984945385 -0.093 0.513 0.267473139565041 0.00167876594461279 -1.23580979818108 5.76748737131044 P52657 GTF2A2 P52657.S61.p_GTF2A2 P52657_S61s _1_1_61_61 P52657 P52657 Transcription initiation factor IIA subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13154.13154.3 10.58 10.58 10.579 3 1 1 0 545.9448 1555.8542 S61s TMT10 56 (R) VNFRGsLNTYR (F) VNFRGS(0.99)LNT(0.0)Y(0.0)R s:Phosphorylated S GTF2A2 12571 1 1 4864.1 25.72 HUMAN 1 -5.7272 27.7501 NRVSCHDSDDDIMRN-p Q76FK4;S365-p NRVSCHDSDDDIMRN 0.325306077824017 0.111707044410153 0.216333333333333 0.217666666666667 9.1338393274995 12.5667045144502 0.216333333333333 0.217666666666667 0.122072002034012 0.0553770158147963 1.83153369333593 2.43199311297889 Q76FK4 NOL8 Q76FK4.S365.p_NOL8 Q76FK4_S365s _1_1_365_365 Q76FK4 Q76FK4|Q76FK4-4|Q76FK4-2|F5H101 Nucleolar protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5082.5082.3 13.01 13.01 2.134 2 1 1 0 586.9056 1678.7362 S365s TMT10 360 (R) VSCHDsDDDIMR (N) VS(0.0)CHDS(0.99)DDDIMR C:Carbamidomethylation,s:Phosphorylated S NOL8 132527 4 3 605.1 262.45 HUMAN 1 9.1338 12.5667 NRVTDKLTPIHDRIF-p P28072;T69-p NRVTDKLTPIHDRIF 0.974612950944457 0.786344339674836 -0.00533333333333334 -0.0306666666666667 0.217818424540697 1.4485733148142 -0.00533333333333335 -0.0306666666666667 0.951082427411531 0.716378706555489 -0.0642440962334761 -0.382858635398717 P28072 PSMB6 P28072.T69.p_PSMB6 P28072_T69t _1_1_69_69 P28072 P28072|A0A087X2I4 Proteasome subunit beta type-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10694.10694.3 14.11 14.11 3.668 2 1 1 0 611.6736 1753.0372 T69t TMT10 64 (R) VTDKLtPIHDR (I) VT(0.0)DKLT(0.99)PIHDR K:TMT10,t:Phosphorylated T PSMB6 25585.5 2 1 4194.1 35.59 HUMAN 1 -0.2178 -1.4486 NRWVSIFSPEGKFKT-p O75382;S561-p NRWVSIFSPEGKFKT 0.532081809207476 0.146481720175667 0.0976666666666667 0.27 5.07067724706719 10.9872183027947 0.0976666666666667 0.27 0.311123112798098 0.0796669461354404 1.11699445604877 2.15290093980395 O75382 TRIM3 O75382.S561.p_TRIM3 O75382_S561s _1_1_561_561 O75382 O75382|O75382-2|A0A1W2PPI7 Tripartite motif-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29754.29754.3 7.92 7.92 3.763 2 1 1 0 563.3002 1607.9198 S561s TMT10 556 (R) WVSIFsPEGK (F) WVS(0.0)IFS(0.99)PEGK K:TMT10,s:Phosphorylated S TRIM3 81912.1 1 7 1265.1 160.44 HUMAN 1 5.0707 10.9872 NRYDKKYSWDVKSLV-p Q08623-4;S65-p NRYDKKYSWDVKSLV 0.130622950644904 0.106603085828367 -0.281333333333333 0.184666666666667 18.2828973049077 12.8429777778037 -0.281333333333333 0.184666666666667 0.0148494466195854 0.051963957897027 -3.51974617561272 2.48146862133812 Q08623 PUDP Q08623.4.S65.p_PUDP Q08623-4_S65s _1_1_65_65 Q08623-4 Q08623-4|Q08623-3 Isoform 4 of Pseudouridine-5'-phosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15938.15938.3 8.51 8.51 8.513 2 1 1 0 564.9825 1612.9666 S65s TMT10 63 (K) KYsWDVK (S) KY(0.0)S(0.99)WDVK K:TMT10,s:Phosphorylated S PUDP 27743.4 1 2 5396.1 19.71 HUMAN 1 -18.2829 12.843 NRYGSLNSLESTSSS-p Q9Y6D6;S667-p NRYGSLNSLESTSSS 0.875336768004935 0.0771847248463858 -0.0286666666666667 0.241 1.13242774793041 14.7596225257532 -0.0286666666666667 0.241 0.770472647037633 0.033422408840428 -0.306774428265275 2.83167700548834 Q9Y6D6 ARFGEF1 Q9Y6D6.S667.p_ARFGEF1 Q9Y6D6_S667s_1_1_667_667 Q9Y6D6 Q9Y6D6 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28923.28923.4 19.41 15.96 2.356 14 1 1 0 1064.7535 4159.0065 S667s M683m N688n TMT10 662 (R) YGSLNsLESTSSSGIGSYSTQmSGTDnPEQFEVLK (Q) Y(0.0)GS(0.0)LN(0.0)S(0.99)LES(0.0)T(0.0)S(0.0)S(0.0)S(0.0)GIGS(0.0)Y(0.0)S(0.0)T(0.0)QM(1.0)S(0.0)GT(0.0)DN(0.99)PEQFEVLK K:TMT10,s:Phosphorylated S,m:Oxidized methionine,n:Deamidated ARFGEF1 210988.4 21 7 381.1 335.01 HUMAN 1 -1.1324 14.7596 NSAGLGPSPCLPDLV-p Q5VUA4;S2166-p NSAGLGPSPCLPDLV 0.902785380781038 0.178464205588341 -0.0306666666666667 0.217 0.872215394094296 9.84703562927396 -0.0306666666666667 0.217 0.818047384797238 0.103584896650142 -0.241510533228042 1.95437042924319 Q5VUA4 ZNF318 Q5VUA4.S2166.p_ZNF318 Q5VUA4_S2166s _1_1_2166_2166 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.36742.36742.3 22.45 22.45 7.246 4 1 1 0 880.1105 2558.3486 S2166s TMT10 2157 (K) TINSAGLGPsPCLPDLVDFVTR (T) T(0.0)INS(0.0)AGLGPS(0.99)PCLPDLVDFVT(0.0)R C:Carbamidomethylation,s:Phosphorylated S ZNF318 252762.4 1 36 37.1 870.88 HUMAN 1 -0.8722 9.847 NSALASDSIGLQKTL-p P0CAP1-3;S140-p NSALASDSIGLQKTL 0.332256356782789 0.0161347105288124 -0.181333333333333 0.342666666666667 8.93683057510961 24.751908853962 -0.181333333333333 0.342666666666667 0.127737067731632 0.00334818244193315 -1.79742781964622 4.97508673472474 P0CAP1 POLR2M P0CAP1.3.S140.p_POLR2M P0CAP1-3_S138sS140s_2_2_138_140 P0CAP1-3 P0CAP1-3|P0CAP1-9 Isoform 3 of Myocardial zonula adherens protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.39892.39908.5 7.33 2.79 7.286 9 2 2 0 1189.5463 5782.8482 N102n S138s S140s Hydrogen 99 (K) EEMnYIKDVSHAQQEYLENHIQTQSSALDRFNAMNSALAsDsIGLQK (T) EEMN(0.99)Y(0.0)IKDVS(0.0)HAQQEY(0.0)LEN(0.0)HIQT(0.0)QS(0.0)S(0.0)ALDRFN(0.0)AMN(0.0)S(0.0)ALAS(0.99)DS(0.99)IGLQK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S MYZAP 50608.5 1 1 7194.1 7.33 HUMAN 1 -8.9368 24.7519 NSALRQMSYGGKFGS-p J3KPD3;S156-p NSALRQMSYGGKFGS 0.0333915231240893 0.0304837664952524 0.624666666666667 0.371333333333333 34.4038483291114 20.4889683972372 0.624666666666667 0.371333333333333 0.000362756469985436 0.00893517700535677 7.89226596016715 3.98084111819002 J3KPD3 RBM7 J3KPD3.S156.p_RBM7 J3KPD3_S156s _1_1_156_156 J3KPD3 J3KPD3|Q9Y580|G3V1T9 RNA binding motif protein 7, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9636.9636.2 7.71 7.71 7.712 2 1 1 0 654.8231 1228.676 S156s TMT10 154 (R) QMsYGGK (F) QMS(0.99)Y(0.0)GGK K:TMT10,s:Phosphorylated S RBM7 30590.1 1 2 4643.1 28.43 HUMAN 1 34.4038 20.489 NSASVTVSPASAIQT-p Q6PI47;S298-p NSASVTVSPASAIQT 0.295154464069677 0.164095458513903 0.186 0.161333333333333 9.98513076313634 10.3204990574112 0.186 0.161333333333333 0.100342963610412 0.0928859643327429 1.97912726849609 2.03659776120708 Q6PI47 KCTD18 Q6PI47.S298.p_KCTD18 Q6PI47_S298s _1_1_298_298 Q6PI47 Q6PI47|Q6PI47-3 BTB/POZ domain-containing protein KCTD18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16304.16304.3 14.49 14.49 1.304 8 1 1 0 824.0764 2390.2473 S298s TMT10 291 (K) NSASVTVsPASAIQTSAGATANR (F) NS(0.0)AS(0.0)VT(0.0)VS(0.99)PAS(0.0)AIQT(0.0)S(0.0)AGAT(0.0)ANR s:Phosphorylated S KCTD18 47251.8 1 2 2706.1 73.29 HUMAN 1 9.9851 10.3205 NSATGVPTV______-p P11940;T635-p NSATGVPTV______ 0.718947568381735 0.725242254861977 0.0826666666666667 -0.037 2.70487637920487 1.9211773636893 0.0826666666666667 -0.0369999999999999 0.536429140538997 0.642513509571841 0.659804323633925 -0.491218354160264 P11940 PABPC1 P11940.T635.p_PABPC1 P11940_T635t _1_1_635_635 P11940 P11940|Q9H361|E7ERJ7|E7EQV3|P11940-2|A0A087WTT1 Polyadenylate-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16754.16754.2 12.35 12.35 12.348 3 1 1 0 662.8386 1244.7048 T635t TMT10 626 (K) AVNSATGVPtV (-) AVNS(0.0)AT(0.0)GVPT(0.99)V t:Phosphorylated T PABPC1 70897.8 1 5 1996.2 103.46 HUMAN 1 2.7049 -1.9212 NSDDAPWSPKARVTP-p Q9UPP1;S880-p NSDDAPWSPKARVTP 0.823880329991928 0.0108662924085325 -0.0326666666666667 -0.589333333333333 1.62228302534209 27.5225546371641 -0.0326666666666667 -0.589333333333334 0.688290376601389 0.00176906803871068 -0.423428229065636 -5.7042903852356 Q9UPP1 PHF8 Q9UPP1.S880.p_PHF8 Q9UPP1_S880s _1_1_880_880 Q9UPP1 Q9UPP1|Q9UPP1-2|Q9UPP1-3|Q9UPP1-4|Q9UPP1-5 Histone lysine demethylase PHF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12790.12790.3 14.9 11.2 14.901 2 1 1 0 671.3548 1932.0794 S880s TMT10 872 (K) KNSDDAPWsPK (A) KNS(0.0)DDAPWS(0.99)PK K:TMT10,s:Phosphorylated S PHF8 118946 7 25 376.1 336.84 HUMAN 1 -1.6223 -27.5226 NSDDLNASPKTSATQ-p O43156;S459-p NSDDLNASPKTSATQ 0.462124054942241 0.0610999358357444 -0.157 -0.319666666666667 6.18288280942561 16.1665144933841 -0.157 -0.319666666666667 0.24083062849936 0.0241740018307221 -1.31707795159231 -3.09801109716258 O43156 TTI1 O43156.S459.p_TTI1 O43156_S459s _1_1_459_459 O43156 O43156 TELO2-interacting protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15602.15602.2 11.96 10.29 6.029 2 1 1 0 892.9346 1704.8957 S459s TMT10 451 (R) WNSDDLNAsPK (T) WNS(0.0)DDLNAS(0.99)PK K:TMT10,s:Phosphorylated S TTI1 123550.6 4 1 4698.1 27.82 HUMAN 1 -6.1829 -16.1665 NSDNNLLSLDGLDNE-p Q9Y2L5;S279-p NSDNNLLSLDGLDNE 0.94845277588196 0.106755785731347 0.013 0.199333333333333 0.456209831621982 12.836019831453 0.013 0.199333333333333 0.900282932374043 0.0520472774498617 0.131298289262592 2.48021981431595 Q9Y2L5 TRAPPC8 Q9Y2L5.S279.p_TRAPPC8 Q9Y2L5_S279s _1_1_279_279 Q9Y2L5 Q9Y2L5|J3QQJ5|Q9Y2L5-2|J3KSL8|J3QSA1 Trafficking protein particle complex subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26989.26989.3 12.07 9.91 6.206 2 1 1 0 800.0735 2318.224 S279s TMT10 272 (K) NSDNNLLsLDGLDNEVK (D) NS(0.0)DNNLLS(0.99)LDGLDNEVK K:TMT10,s:Phosphorylated S TRAPPC8 162648.8 1 3 1423.1 144.01 HUMAN 1 0.4562 12.836 NSELSNPSETESERK-p P51114-2;S409-p NSELSNPSETESERK 0.310054173693655 0.136903905995117 0.177 0.204666666666667 9.50782577266444 11.380609484141 0.177 0.204666666666667 0.111999845282732 0.0727677675878994 1.89631456981694 2.22188639666195 P51114 FXR1 P51114.2.S409.p_FXR1 P51114-2_S409s _1_1_409_409 P51114-2 P51114|B4DXZ6|P51114-2|P51114-3 Isoform 2 of Fragile X mental retardation syndrome-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9474.9474.3 23.45 20.02 1.161 10 1 1 0 1014.4482 2961.366 S409s TMT10 391 (R) RGPNYTSGYGTNSELSNPsETESER (K) RGPNY(0.0)T(0.0)S(0.0)GY(0.0)GT(0.0)NS(0.0)ELS(0.0)NPS(0.99)ET(0.0)ES(0.0)ER s:Phosphorylated S FXR1 61190.3 8 8 553.2 273.48 HUMAN 1 9.5078 11.3806 NSEPPRGSFPSFEPR-p Q99640;S479-p NSEPPRGSFPSFEPR 0.928133198175071 0.00529900879737328 0.0143333333333333 -0.571 0.641554788789313 33.0474474999141 0.0143333333333333 -0.571 0.862669653852666 0.000495741469744689 0.181380264140854 -7.40230857943027 Q99640 PKMYT1 Q99640.S479.p_PKMYT1 Q99640_S479s _1_1_479_479 Q99640 Q99640|Q99640-3|Q99640-4 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25173.25173.4 16.36 13.79 1.211 4 1 1 0 714.5946 2775.3787 S479s TMT10 464 (R) DALDLSDINSEPPRGsFPSFEPR (N) DALDLS(0.0)DINS(0.0)EPPRGS(0.99)FPS(0.0)FEPR s:Phosphorylated S PKMYT1 55090.9 4 12 926.1 199.78 HUMAN 1 0.6416 -33.0474 NSERAQKSEPREGQK-p Q9Y388;S216-p NSERAQKSEPREGQK 0.620003001212767 0.990324797150279 0.079 0.00233333333333338 3.8584725694756 0.0623075498475691 0.079 0.00233333333333345 0.41129434948658 0.985755582001038 0.889977995436076 0.0186917355248802 Q9Y388 RBMX2 Q9Y388.S216.p_RBMX2 Q9Y388_S216s _1_1_216_216 Q9Y388 Q9Y388|A0A1W2PP04 RNA-binding motif protein, X-linked 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7335.7335.5 7.24 3.67 99 1 1 1 0 519.3058 2512.5381 S216s TMT10 213 (R) AQKsEPREGQKLPK (S) AQKS(1.0)EPREGQKLPK K:TMT10,s:Phosphorylated S RBMX2 37563.2 2 2 1440.1 142.33 HUMAN 1 3.8585 0.0623 NSEVEEESEEDEDYI-p Q8N108-12;S219-p NSEVEEESEEDEDYI 0.84076627683575 0.023133877435803 0.034 0.329666666666667 1.45442556591015 22.3310037206106 0.034 0.329666666666667 0.715414014439675 0.00584654945877331 0.384278589712557 4.39329847297612 Q8N108 MIER1 Q8N108.12.S219.p_MIER1 Q8N108-12_S219s _1_1_219_219 Q8N108-12 Q8N108-13|Q8N108-15|Q8N108-17|Q8N108-18|Q8N108-14|Q8N108-16|Q8N108-19|Q8N108-12 Isoform 2 of Mesoderm induction early response protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24080.24080.4 23.78 18.93 4.362 6 1 1 0 995.6939 3899.8114 S219s TMT10 208 (K) YFDTNSEVEEEsEEDEDYIPSEDWKK (E) Y(0.0)FDT(0.0)NS(0.0)EVEEES(0.99)EEDEDY(0.0)IPS(0.0)EDWKK K:TMT10,s:Phosphorylated S MIER1 63824.4 4 2 1736.1 118.57 HUMAN 1 1.4544 22.331 NSFATRLSNIFVIGK-p P62701;S223-p NSFATRLSNIFVIGK 0.649743378726889 0.546027767166226 -0.0663333333333333 -0.0633333333333333 3.51308861158659 3.53455964335278 -0.0663333333333333 -0.0633333333333333 0.445339419662319 0.443143145093953 -0.822831363945178 -0.826916157733148 P62701 RPS4X P62701.S223.p_RPS4X P62701_S223s _1_1_223_223 P62701 P62701 40S ribosomal protein S4, X isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28611.28611.3 19.1 19.1 1.185 3 1 1 0 854.7881 2482.3818 S223s TMT10 212 (K) DANGNSFATRLsNIFVIGK (G) DANGNS(0.0)FAT(0.0)RLS(0.99)NIFVIGK K:TMT10,s:Phosphorylated S RPS4X 29825.4 6 4 2942.1 65.29 HUMAN 1 -3.5131 -3.5346 NSFLKQQSPQEPKSL-p Q9UHB6-4;S699-p NSFLKQQSPQEPKSL 0.199418709267342 0.0803355914888433 -0.230333333333333 -0.196666666666667 13.6178999285066 14.5311072174148 -0.230333333333333 -0.196666666666667 0.0434720386453971 0.0352281046867511 -2.62302806535137 -2.78921306499793 Q9UHB6 LIMA1 Q9UHB6.4.S699.p_LIMA1 Q9UHB6-4_S699s _1_1_699_699 Q9UHB6-4 Q9UHB6-4|Q9UHB6-5|Q9UHB6-2|F8VQE1|Q9UHB6-3|F8VS07 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5502.5709.2 12.69 12.69 99 1 1 1 0 740.3848 1399.7946 S699s TMT10 697 (K) QQsPQEPK (S) QQS(1.0)PQEPK K:TMT10,s:Phosphorylated S LIMA1 85678.4 6 30 42.1 822.82 HUMAN 1 -13.6179 -14.5311 NSFVRQGSAESYTSR-p Q02641;S59-p NSFVRQGSAESYTSR 0.191404434921086 0.490017907526198 -0.247666666666667 -0.0726666666666667 14.0159556184462 4.14176849710258 -0.247666666666667 -0.0726666666666667 0.0396647241355704 0.385321418398914 -2.6958484384704 -0.943969531779926 Q02641 CACNB1 Q02641.S59.p_CACNB1 Q02641_S59s _1_1_59_59 Q02641 Q02641|Q02641-2|Q02641-3|Q6TME4 Voltage-dependent L-type calcium channel subunit beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11787.11787.5 15.06 15.06 2.306 8 1 1 0 710.9453 3470.74 S59s TMT10 57 (R) QGsAESYTSRPSDSDVSLEEDREALRK (E) QGS(0.99)AES(0.0)Y(0.0)T(0.0)S(0.0)RPS(0.0)DS(0.0)DVS(0.0)LEEDREALRK K:TMT10,s:Phosphorylated S CACNB1 65997.7 2 1 5951.1 15.06 HUMAN 1 -14.016 -4.1418 NSGLATYSPPMGPVS-p P21359;S864-p NSGLATYSPPMGPVS 0.848075740909989 0.829611752158284 0.03 -0.023 1.3850309874149 1.13380698351271 0.03 -0.023 0.726937212414308 0.770227998622463 0.367853409481798 -0.307082911467515 P21359 NF1 P21359.S864.p_NF1 P21359_S864s _1_1_864_864 P21359 P21359|P21359-6|P21359-2|P21359-4 Neurofibromin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16984.17187.3 18.97 18.97 2.636 6 1 1 0 720.34 2079.0378 S864s TMT10 856 (R) SNSGLATYsPPMGPVSER (K) S(0.0)NS(0.0)GLAT(0.0)Y(0.0)S(0.99)PPMGPVS(0.0)ER s:Phosphorylated S NF1 322961 11 4 437.1 312.53 HUMAN 1 1.385 -1.1338 NSGPKRRSGPIKPEK-p Q9H7E2-3;S628-p NSGPKRRSGPIKPEK 0.175566091093158 0.00539994833464165 -0.261666666666667 -0.675666666666667 15.0272635518607 32.9041124579363 -0.261666666666667 -0.675666666666667 0.0314248812201697 0.000512375970826208 -2.88356603993157 -7.35356860596777 Q9H7E2 TDRD3 Q9H7E2.3.S628.p_TDRD3 Q9H7E2-3_S628s _1_1_628_628 Q9H7E2-3 Q9H7E2-3|Q9H7E2-2 Isoform 3 of Tudor domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9969.9969.3 10.56 10.56 99 1 1 1 0 541.6545 1542.9822 S628s TMT10 628 (R) sGPIKPEK (I) S(1.0)GPIKPEK K:TMT10,s:Phosphorylated S TDRD3 83500.9 3 3 4507.1 30.57 HUMAN 1 -15.0273 -32.9041 NSIKTFWSPELKKER-p X6RLX0;S191-p NSIKTFWSPELKKER 0.848131199373077 0.391047182191109 0.0366666666666666 0.105 1.38273140276013 5.42131072617303 0.0366666666666667 0.105 0.727322226817176 0.286991429436939 0.367306611927302 1.18047987132085 X6RLX0 ERC1 X6RLX0.S191.p_ERC1 X6RLX0_S191s _1_1_191_191 X6RLX0 X6RLX0|Q8IUD2|Q8IUD2-3|G8JLD3 ELKS/Rab6-interacting/CAST family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21948.21948.2 12.6 12.6 3.952 2 1 1 0 952.0375 1823.1034 S191s TMT10 188 (K) TFWsPELKK (E) T(0.0)FWS(0.99)PELKK K:TMT10,s:Phosphorylated S ERC1 128700.8 4 7 904.1 203.11 HUMAN 1 1.3827 5.4213 NSIMRQDSLEPVLRD-p Q99576-3;S73-p NSIMRQDSLEPVLRD 0.484249307266538 0.0546469039470965 0.093 0.236 5.80110395529736 16.8293726251711 0.093 0.236 0.262959947562763 0.0207521327777792 1.24904967336244 3.22667549010547 Q99576 TSC22D3 Q99576.3.S73.p_TSC22D3 Q99576-3_S73s _1_1_73_73 Q99576-3 Q99576-3 Isoform 2 of TSC22 domain family protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28664.28664.4 14.92 14.92 2.956 3 1 1 0 921.9543 3604.8236 S73s TMT10 65 (K) LNSIMRQDsLEPVLRDPCYLINEGICNR (N) LNS(0.0)IMRQDS(0.99)LEPVLRDPCY(0.0)LINEGICNR C:Carbamidomethylation,s:Phosphorylated S TSC22D3 22669.2 2 4 2467.1 82.09 HUMAN 1 5.8011 16.8294 NSIRHSLSFNDCFVK-p P55317;S223-p NSIRHSLSFNDCFVK 0.479708594865114 0.728410699208001 0.112 0.045 5.87207414066458 1.89543768737695 0.112 0.045 0.2586977109459 0.646332852488831 1.26174095555494 0.485464102545236 P55317 FOXA1 P55317.S223.p_FOXA1 P55317_S223s _1_1_223_223 P55317 P55317|P55317-2|P55318 Hepatocyte nuclear factor 3-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19168.19168.3 14.02 14.02 2.315 2 1 1 0 631.3114 1811.9515 S223s TMT10 220 (R) HSLsFNDCFVK (V) HS(0.0)LS(0.99)FNDCFVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FOXA1 49375.2 2 1 1359.1 150.2 HUMAN 1 5.8721 1.8954 NSISRFNSLPRPDPE-p A1L390;S759-p NSISRFNSLPRPDPE 0.0901040343669965 0.00615182697114356 -0.362 -0.534666666666667 22.241026151709 31.8672692054827 -0.362 -0.534666666666667 0.00596894235653539 0.00065053861307902 -4.37726452147896 -7.0089554174237 A1L390 PLEKHG3 A1L390.S759.p_PLEKHG3 A1L390_S759s _1_1_759_759 A1L390 A1L390|A1L390-3|A1L390-2|G3V311 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21068.21068.3 13.31 4.53 6.72 2 1 1 0 824.4455 2391.3437 S759s TMT10 757 (R) FNsLPRPDPEPVPPVGSK (R) FNS(0.99)LPRPDPEPVPPVGS(0.0)K K:TMT10,s:Phosphorylated S PLEKHG3 135322.7 2 12 284.1 386.18 HUMAN 1 -22.241 -31.8673 NSKAKGKSDSEDGEK-p O00203;S750-p NSKAKGKSDSEDGEK 0.218346271722676 0.0405973069586793 0.247666666666667 0.266666666666667 12.7359832050857 18.6552543310079 0.247666666666667 0.266666666666667 0.0532600634503297 0.0136293318794261 2.46359956854863 3.59303415084023 O00203 AP3B1 O00203.S750.p_AP3B1 O00203_S750s _1_1_750_750 O00203 O00203|O00203-3 AP-3 complex subunit beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5564.5802.5 10.53 5.33 2.283 2 1 1 0 596.1234 2896.6236 S750s TMT10 746 (K) AKGKsDSEDGEKENEK (S) AKGKS(0.99)DS(0.0)EDGEKENEK K:TMT10,s:Phosphorylated S AP3B1 121888.5 5 7 445.1 310.27 HUMAN 1 12.736 18.6553 NSKDRRLSPATENKL-p H3BVG0;S364-p NSKDRRLSPATENKL 0.361131241199818 0.813900349912277 0.127666666666667 0.0273333333333333 8.22118340804868 1.25183048295124 0.127666666666667 0.0273333333333333 0.150619658709722 0.74957820731444 1.67350977131901 0.335872524816268 H3BVG0 NotFound H3BVG0.S364.p_NotFound H3BVG0_S364s _1_1_364_364 H3BVG0 H3BVG0|Q8N1F7|Q8N1F7-2 Nuclear pore complex protein Nup93 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4657.4657.2 10.77 10.77 3.76 2 1 1 0 662.845 1244.716 S364s Hydrogen 362 (R) RLsPATENK (L) RLS(0.99)PAT(0.0)ENK K:TMT10-Lys-Only,s:Phosphorylated S NUP93 100351.7 4 8 862.1 210.52 HUMAN 1 8.2212 1.2518 NSKGRDRSPAPSPVL-p Q8IWT3;S1457-p NSKGRDRSPAPSPVL 0.614401637541535 0.410617331567664 0.0743333333333333 0.116 3.92664634069736 5.1424225957297 0.0743333333333333 0.116 0.404888429333609 0.306025587550284 0.903081790733477 1.12986095920999 Q8IWT3 CUL9 Q8IWT3.S1457.p_CUL9 Q8IWT3_S1457s _1_1_1457_1457 Q8IWT3 Q8IWT3|E9PEZ1|Q8IWT3-3 Cullin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12346.12346.2 13.71 9.91 6.022 5 1 1 0 873.4338 1665.8919 S1457s Hydrogen 1455 (R) DRsPAPSPVLPSSSLR (N) DRS(0.99)PAPS(0.0)PVLPS(0.0)S(0.0)S(0.0)LR s:Phosphorylated S CUL9 285617.3 3 7 1190.1 168.21 HUMAN 1 3.9266 5.1424 NSKHRWPTGDNIHAE-p Q5T1Z8;T148-p NSKHRWPTGDNIHAE 0.0734745223162907 0.114397790707448 0.383 -0.211333333333333 24.3330583626727 12.4184373537441 0.383 -0.211333333333333 0.00368717850838243 0.0573002167296538 4.87682010351584 -2.40553143952726 Q5T1Z8 NotFound Q5T1Z8.T148.p_NotFound Q5T1Z8_T148t _1_1_148_148 Q5T1Z8 Q5T1Z8|Q5T1Z4|Q14671-3|Q14671-2|Q14671-4|E9PR38 Pumilio homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4199.4199.4 17.16 17.16 99 1 1 1 0 566.277 2182.1216 T148t TMT10 144 (K) HRWPtGDNIHAEHQVR (S) HRWPT(1.0)GDNIHAEHQVR t:Phosphorylated T PUM1 130847.9 2 5 720.1 237.18 HUMAN 1 24.3331 -12.4184 NSKKRKISLPIEDYF-p Q9UBD5-2;S23-p NSKKRKISLPIEDYF 0.835405086548544 0.00383558492046931 0.04 -0.657333333333333 1.50840878846302 35.762730754292 0.04 -0.657333333333334 0.706576389363586 0.000265293692530692 0.396957013569101 -8.37928370502691 Q9UBD5 ORC3 Q9UBD5.2.S23.p_ORC3 Q9UBD5-2_S23s _1_1_23_23 Q9UBD5-2 Q9UBD5-2 Isoform 2 of Origin recognition complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29131.29131.3 12.79 12.79 3.613 2 1 1 0 745.418 2154.2778 S23s TMT10 21 (R) KIsLPIEDYFNK (G) KIS(0.99)LPIEDY(0.0)FNK K:TMT10,s:Phosphorylated S ORC3 83407.7 1 1 4853.1 25.82 HUMAN 1 1.5084 -35.7627 NSKKRPASPSHNGSS-p Q6PI98-4;S26-p NSKKRPASPSHNGSS 0.898737991140845 0.352743864807213 -0.02 0.160666666666667 0.907170950828199 5.99899325033607 -0.02 0.160666666666667 0.811489500239896 0.25124687861232 -0.250428358586913 1.28407881399468 Q6PI98 INO80C Q6PI98.4.S26.p_INO80C Q6PI98-4_S26s _1_1_26_26 Q6PI98-4 Q6PI98-4|Q6PI98-3|K7ENP7|K7EQ79 Isoform 3 of INO80 complex subunit C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.3967.3967.3 16.49 16.49 1.149 6 1 1 0 771.3768 2232.1522 S26s TMT10 23 (K) RPAsPSHNGSSGGGYGASK (K) RPAS(0.99)PS(0.0)HNGS(0.0)S(0.0)GGGY(0.0)GAS(0.0)K K:TMT10,s:Phosphorylated S INO80C 24611.8 5 1 3474.1 50.14 HUMAN 1 -0.9072 5.999 NSKPRCCSLEGIVDV-p Q5TB30;S422-p NSKPRCCSLEGIVDV 0.41330138595586 0.00448198400218091 0.110333333333333 -0.816333333333333 7.07961916346372 34.4709661706305 0.110333333333333 -0.816333333333334 0.195901645379823 0.000357193364858148 1.47494305628564 -7.90147463429976 Q5TB30 DEPDC1 Q5TB30.S422.p_DEPDC1 Q5TB30_S422s _1_1_422_422 Q5TB30 Q5TB30 DEP domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21277.21277.3 18.67 18.67 17.165 3 1 1 0 754.0299 2180.1092 S422s TMT10 420 (R) CCsLEGIVDVPGNSSK (E) CCS(0.99)LEGIVDVPGNS(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DEPDC1 93984.9 1 3 3115.1 60.32 HUMAN 1 7.0796 -34.471 NSKQPFNSPIRSSVD-p Q9HCM1;S352-p NSKQPFNSPIRSSVD 0.916760171188202 0.352330041887528 -0.0163333333333333 0.096 0.736312702379848 6.00586780376818 -0.0163333333333333 0.0960000000000001 0.84405107971497 0.250849488393684 -0.206361276439803 1.28530278396971 Q9HCM1 KIAA1551 Q9HCM1.S352.p_KIAA1551 Q9HCM1_S352s _1_1_352_352 Q9HCM1 Q9HCM1 Uncharacterized protein KIAA1551 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21856.21856.3 14.4 12.99 2.124 5 1 1 0 1061.8729 3103.6424 S352s TMT10 348 (K) QPFNsPIRSSVDGVQTLAQTNEEK (I) QPFNS(0.99)PIRS(0.0)S(0.0)VDGVQT(0.0)LAQT(0.0)NEEK K:TMT10,s:Phosphorylated S KIAA1551 196679.6 3 2 1693.1 120.71 HUMAN 1 -0.7363 6.0059 NSKTPIFSPFPSVKP-p Q9Y2I9;S873-p NSKTPIFSPFPSVKP 0.848131199373077 0.00527713636094999 0.0276666666666667 -0.628333333333333 1.38269956613889 33.0944865787359 0.0276666666666667 -0.628333333333333 0.727327558583545 0.000490400994381844 0.367299040642858 -7.41836321929155 Q9Y2I9 TBC1D30 Q9Y2I9.S873.p_TBC1D30 Q9Y2I9_S873s _1_1_873_873 Q9Y2I9 Q9Y2I9 TBC1 domain family member 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23660.23660.4 13.24 12.58 3.707 3 1 1 0 621.1208 2401.4938 S873s TMT10 869 (K) TPIFsPFPSVKPLRK (S) T(0.0)PIFS(0.99)PFPS(0.0)VKPLRK K:TMT10,s:Phosphorylated S TBC1D30 103654.4 1 16 283.1 386.67 HUMAN 1 1.3827 -33.0945 NSLETVGTPDSGRGR-p O43581-3;T58-p NSLETVGTPDSGRGR 0.858605844280823 0.0945271591419794 0.0256666666666667 -0.209666666666667 1.29058035418027 13.5479933506954 0.0256666666666667 -0.209666666666667 0.742919853777273 0.0441774521271975 0.34525896946035 -2.60879308228216 O43581 SYT7 O43581.3.T58.p_SYT7 O43581-3_T58t _1_1_58_58 O43581-3 O43581-3|O43581-4|O43581-5|O43581-2|O43581-6|F5GX00 Isoform 3 of Synaptotagmin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7087.7087.3 19.09 19.09 3.648 4 1 1 0 618.9689 1774.9245 T58t TMT10 51 (K) NSLETVGtPDSGRGR (S) NS(0.0)LET(0.0)VGT(0.99)PDS(0.0)GRGR t:Phosphorylated T SYT7 76194.9 6 2 1782.1 115.27 HUMAN 1 1.2906 -13.548 NSLISGLSQDEEDPP-p Q86TP1;S399-p NSLISGLSQDEEDPP 0.369982338559119 0.00817736014367236 0.125666666666667 0.452333333333333 8.00658056141972 29.7129174914641 0.125666666666667 0.452333333333333 0.158249353281008 0.00106833695366142 1.63630214770869 6.33533578066259 Q86TP1 PRUNE Q86TP1.S399.p_PRUNE Q86TP1_S399s _1_1_399_399 Q86TP1 Q86TP1|Q86TP1-2|Q86TP1-3|Q86TP1-4|Q86TP1-7|Q86TP1-5|Q86TP1-6 Exopolyphosphatase PRUNE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35293.35495.5 24.24 20.1 3.211 6 1 1 0 920.6511 4519.2624 S399s TMT10 390 (R) ASNSLISGLsQDEEDPPLPPTPMNSLVDECPLDQGLPK (L) AS(0.0)NS(0.0)LIS(0.0)GLS(0.99)QDEEDPPLPPT(0.0)PMNS(0.0)LVDECPLDQGLPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRUNE1 50826.3 23 2 3186.1 58.23 HUMAN 1 8.0066 29.7129 NSLKSDGYHKRTDRK-p Q96T21;Y194-p NSLKSDGYHKRTDRK 0.630414271538022 0.00491910366240462 0.0683333333333333 0.656333333333333 3.7277627522627 33.6745844437229 0.0683333333333333 0.656333333333333 0.423861259966351 0.000429083244263186 0.864719863927327 7.61879413828633 Q96T21 SECISBP2 Q96T21.Y194.p_SECISBP2 Q96T21_Y194y_1_1_194_194 Q96T21 Q96T21|Q96T21-3|Q96T21-2 Selenocysteine insertion sequence-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9955.9955.4 9.22 2.97 2.043 7 1 1 0 813.9136 3171.6812 N187n Y194y Hydrogen 174 (K) SARGSHHLSIYAEnSLKSDGyHKR (T) S(0.0)ARGS(0.0)HHLS(0.0)IY(0.0)AEN(1.0)S(0.0)LKS(0.0)DGY(0.99)HKR K:TMT10-Lys-Only,n:Deamidated,y:Phosphorylated Y SECISBP2 96144.8 1 1 5250.1 21.34 HUMAN 1 3.7278 33.6746 NSLPPHMSPVKITFT-p Q7Z589-4;S272-p NSLPPHMSPVKITFT 0.536318608089857 0.00880149451708908 -0.102666666666667 -0.491666666666667 5.0048785856567 29.1412647378128 -0.102666666666667 -0.491666666666667 0.315872735473695 0.00121863466054998 -1.10495205943856 -6.16564049849246 Q7Z589 C11orf30 Q7Z589.4.S272.p_C11orf30 Q7Z589-4_S272s _1_1_272_272 Q7Z589-4 Q7Z589-7|Q7Z589-4|Q7Z589-5|Q7Z589-6|E9PMC9|Q7Z589-2 Isoform 4 of BRCA2-interacting transcriptional repressor EMSY HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31993.32201.4 19.79 19.79 2.388 4 1 1 0 680.8492 2640.4076 S272s TMT10 256 (K) MSNIMQSIANSLPPHMsPVK (I) MS(0.0)NIMQS(0.0)IANS(0.0)LPPHMS(0.99)PVK K:TMT10,s:Phosphorylated S EMSY 142030.9 10 6 879.1 207.7 HUMAN 1 -5.0049 -29.1413 NSLPRNVSPEFVPCE-p O94986;S1461-p NSLPRNVSPEFVPCE 0.756736491111287 0.0435979921437467 -0.043 -0.257 2.3177227546857 18.2250517760008 -0.043 -0.257 0.586445589649493 0.0150485557801088 -0.578068480738546 -3.50504062541269 O94986 CEP152 O94986.S1461.p_CEP152 O94986_S1461s _1_1_1461_1461 O94986 O94986|O94986-3 Centrosomal protein of 152 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21712.21712.3 21.23 21.23 99 1 1 1 0 866.7527 2518.2801 S1461s TMT10 1459 (R) NVsPEFVPCEGEGGFGLHK (K) NVS(1.0)PEFVPCEGEGGFGLHK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CEP152 198019.2 6 9 1197.1 167.32 HUMAN 1 -2.3177 -18.2251 NSLVSSASP______-p Q96M89;S664-p NSLVSSASP______ 0.167300432977981 0.0140943537235631 -0.252666666666667 -0.512333333333333 15.5286578308792 25.66982771868 -0.252666666666667 -0.512333333333333 0.0279984646690436 0.0027102991452654 -2.97820197395045 -5.20871927853008 Q96M89 CCDC138 Q96M89.S664.p_CCDC138 Q96M89_S664s _1_1_664_664 Q96M89 Q96M89 Coiled-coil domain-containing protein 138 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12501.12501.2 12.71 12.71 1.716 4 1 1 0 665.7994 1250.6248 S664s TMT10 656 (K) CNSLVSSAsP (-) CNS(0.0)LVS(0.0)S(0.0)AS(0.99)P C:Carbamidomethylation,s:Phosphorylated S CCDC138 76958.9 1 6 2970.1 64.38 HUMAN 1 -15.5287 -25.6698 NSMAARKSLLALEKE-p Q9Y4D1;S118-p NSMAARKSLLALEKE 0.193523334654365 0.0472475938730985 -0.556666666666667 0.336333333333333 13.9236512519726 17.736793422283 -0.556666666666667 0.336333333333333 0.0405167754785393 0.016839169084407 -2.67891140832148 3.40645438888919 Q9Y4D1 DAAM1 Q9Y4D1.S118.p_DAAM1 Q9Y4D1_S118s _1_1_118_118 Q9Y4D1 Q9Y4D1|Q9Y4D1-2|Q9Y4D1-3 Disheveled-associated activator of morphogenesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16591.16591.4 13.06 13.06 5.749 2 1 1 0 640.1003 2477.4066 S118s TMT10 118 (K) sLLALEKEEEEERSK (T) S(0.99)LLALEKEEEEERS(0.0)K K:TMT10,s:Phosphorylated S DAAM1 124041.8 1 1 2038.1 101.28 HUMAN 1 -13.9237 17.7368 NSMLRLTSIGSDEDE-p Q9UHW9;S1029-p NSMLRLTSIGSDEDE 0.236551014520431 0.0445942976251031 -0.18 -0.315 11.9960074505641 18.0812387164437 -0.18 -0.315 0.0631537661935372 0.0155552189459049 -2.33162643229761 -3.47586331460594 Q9UHW9 SLC12A6 Q9UHW9.S1029.p_SLC12A6 Q9UHW9_S1029sS1032s_2_2_1029_1032 Q9UHW9 Q9UHW9|Q9UHW9-4|Q9UHW9-3|Q9UHW9-2|Q9UHW9-5|Q9UHW9-6 Solute carrier family 12 member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20754.20754.3 11.42 9.49 1.135 6 2 2 0 898.0591 2532.2241 S1029s S1032s TMT10 1027 (R) LTsIGsDEDEETETYQEK (V) LT(0.0)S(0.99)IGS(0.99)DEDEET(0.0)ET(0.0)Y(0.0)QEK K:TMT10,s:Phosphorylated S SLC12A6 128698.7 1 16 1247.3 162.14 HUMAN 1 -11.996 -18.0812 NSNAQNPSEEEGEGQ-p O43422;S141-p NSNAQNPSEEEGEGQ 0.736726660085958 0.147304535056403 -0.0606666666666667 0.182 2.51436070015662 10.9488376237805 -0.0606666666666667 0.182 0.560484917041926 0.0803741212336969 -0.619921358647812 2.14618611131068 O43422 PRKRIR O43422.S141.p_PRKRIR O43422_S141s _1_1_141_141 O43422 O43422|O43422-2 52 kDa repressor of the inhibitor of the protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20698.20698.4 24.08 17.61 9.067 4 1 1 0 1091.2786 4282.1202 S141s TMT10 129 (K) HKETNNSNAQNPsEEEGEGQDEDILPLTLEEK (E) HKET(0.0)NNS(0.0)NAQNPS(0.99)EEEGEGQDEDILPLT(0.0)LEEK K:TMT10,s:Phosphorylated S THAP12 88843.5 5 3 3205.1 57.57 HUMAN 1 -2.5144 10.9488 NSNARSNSLRLSLIG-p O94915;S1941-p NSNARSNSLRLSLIG 0.610377495795469 0.482884442961378 0.073 -0.119666666666667 3.97194504628108 4.21911120319818 0.073 -0.119666666666667 0.400687224270528 0.378520042063142 0.911763080000751 -0.958619007633094 O94915 FRYL O94915.S1941.p_FRYL O94915_S1941s _1_1_1941_1941 O94915 O94915 Protein furry homolog-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18116.18116.3 10.44 10.44 1.157 3 1 1 0 547.2967 1559.9067 S1941s TMT10 1939 (R) SNsLRLSLIGDR (R) S(0.0)NS(0.99)LRLS(0.0)LIGDR s:Phosphorylated S FRYL 342387.4 3 8 526.1 282.44 HUMAN 1 3.9719 -4.2191 NSNHGSQSPRNVEER-p Q03112-3;S1048-p NSNHGSQSPRNVEER 0.342075757494071 0.858074022295887 0.191333333333333 0.03 8.65621206980655 0.935831842784229 0.191333333333333 0.03 0.13626326568219 0.806151777158003 1.74885219604345 0.257678988285499 Q03112 MECOM Q03112.3.S1048.p_MECOM Q03112-3_S1046sS1048s_2_2_1046_1048 Q03112-3 Q03112-3|E7EQ57|Q03112-4|A0A0C3SFZ7|Q03112-6 Isoform 2 of MDS1 and EVI1 complex locus protein EVI1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8943.8943.3 8.94 8.94 8.937 3 2 2 0 635.2743 1743.8724 S1046s S1048s TMT10 1037 (R) NFIGNSNHGsQsPR (N) NFIGNS(0.0)NHGS(0.99)QS(0.99)PR s:Phosphorylated S MECOM 141074 2 11 937.1 198.37 HUMAN 1 8.6562 0.9358 NSNNMNKSESDQEDN-p Q14CW9-2;S129-p NSNNMNKSESDQEDN 0.138650428219969 0.926128348425639 0.256666666666667 0.0123333333333334 17.5713950313548 0.470628885882147 0.256666666666667 0.0123333333333334 0.0174928469691639 0.897298850542982 3.37603738661507 0.135242914885995 Q14CW9 ATXN7L3 Q14CW9.2.S129.p_ATXN7L3 Q14CW9-2_S129sS131s_2_2_129_131 Q14CW9-2 Q14CW9-2 Isoform 2 of Ataxin-7-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17272.17272.5 17.2 17.2 1.651 6 2 2 0 951.6296 4593.1729 S129s S131s N136n TMT10 120 (R) IANSNNMNKsEsDQEDnDDINDNDWSYGSEKK (A) IAN(0.0)S(0.0)N(0.0)N(0.0)MN(0.0)KS(0.99)ES(0.99)DQEDN(0.99)DDIN(0.0)DN(0.0)DWS(0.0)Y(0.0)GS(0.0)EKK K:TMT10,s:Phosphorylated S,n:Deamidated ATXN7L3 40169 2 5 1482.1 138.38 HUMAN 1 17.5714 0.4706 NSNSNSDSDEDEQRK-p Q6PD62;S1043-p NSNSNSDSDEDEQRK 0.132882806400642 0.0198070948003416 0.256666666666667 0.746666666666667 18.0753427677393 23.3654034344735 0.256666666666667 0.746666666666667 0.0155763509333642 0.00460743966250677 3.47752926899725 4.63604432414322 Q6PD62 CTR9 Q6PD62.S1043.p_CTR9 Q6PD62_S1041sS1043s_2_2_1041_1043 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4729.4729.3 9.25 9.25 1.165 4 2 2 0 900.7419 2540.2792 S1041s S1043s TMT10 1036 (R) NSNSNsDsDEDEQRKK (C) NS(0.0)NS(0.0)NS(0.99)DS(0.99)DEDEQRKK K:TMT10,s:Phosphorylated S CTR9 134412.8 4 14 152.1 508.81 HUMAN 1 18.0753 23.3654 NSPCNVVSKQPGPVT-p O00161;S116-p NSPCNVVSKQPGPVT 0.442129180414877 0.488201724755384 0.137 -0.0913333333333333 6.53209754878517 4.16048489855917 0.137 -0.0913333333333333 0.222223633914418 0.383664406195055 1.3788342102083 -0.947519539820342 O00161 SNAP23 O00161.S116.p_SNAP23 O00161_S116s _1_1_116_116 O00161 O00161 Synaptosomal-associated protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15790.15790.3 18.21 18.21 3.343 4 1 1 0 782.6994 2266.1174 S116s TMT10 101 (K) TTWGDGGENSPCNVVsK (Q) T(0.0)T(0.0)WGDGGENS(0.0)PCNVVS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SNAP23 23696 2 5 1061.1 182.1 HUMAN 1 6.5321 -4.1605 NSPGQPNSVKRKKLP-p P49756;S683-p NSPGQPNSVKRKKLP 0.582575200829836 0.765273579670105 0.0746666666666667 -0.0433333333333333 4.31886577112214 1.60519288438126 0.0746666666666666 -0.0433333333333334 0.369924778885067 0.691004238965511 0.977611154722952 -0.419433116561442 P49756 RBM25 P49756.S683.p_RBM25 P49756_S683s _1_1_683_683 P49756 P49756 RNA-binding protein 25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11661.11661.3 15.98 15.98 6.104 3 1 1 0 631.9999 1814.0172 S683s TMT10 672 (K) LGASNSPGQPNsVK (R) LGAS(0.0)NS(0.0)PGQPNS(0.99)VK K:TMT10,s:Phosphorylated S RBM25 100526.1 1 3 353.1 350.09 HUMAN 1 4.3189 -1.6052 NSPLRENSFGSPLEF-p Q9UQ35;S1326-p NSPLRENSFGSPLEF 0.649743378726889 0.0403455591727108 -0.100833333333333 0.253 3.5121794435147 18.6946789650538 -0.100833333333333 0.253 0.445432658416609 0.013506166631374 -0.822652838177875 3.60115234431492 Q9UQ35 SRRM2 Q9UQ35.S1326.p_SRRM2 Q9UQ35_S1320sS1326s_2_2_1320_1326 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25065.25065.4 14.43 14.43 2.236 4 2 2 0 642.7993 2408.2408 S1320s S1326s TMT10 1316 (K) ELSNsPLRENsFGSPLEFR (N) ELS(0.0)NS(0.99)PLRENS(0.99)FGS(0.0)PLEFR s:Phosphorylated S SRRM2 300351.7 19 205 2.1 3310.34 HUMAN 2 -3.5122 18.6947 NSPLSPPSPRTKSRT-p Q8NCF5;S204-p NSPLSPPSPRTKSRT 0.681308804162149 0.444344653426518 -0.056 -0.0806666666666666 3.12726209588526 4.69048454430855 -0.056 -0.0806666666666666 0.48671394598268 0.339587382559598 -0.74614423069821 -1.04681915132517 Q8NCF5 NFATC2IP Q8NCF5.S204.p_NFATC2IP Q8NCF5_S204s _1_1_204_204 Q8NCF5 Q8NCF5 NFATC2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21192.21400.5 24.73 24.87 2.233 4 1 1 0 582.5221 2828.6125 S204s TMT10 188 (K) KKTEFLDLDNSPLSPPsPR (T) KKT(0.0)EFLDLDNS(0.0)PLS(0.0)PPS(0.99)PR K:TMT10,s:Phosphorylated S NFATC2IP 45987.1 13 6 477.1 300.69 HUMAN 1 -3.1273 -4.6905 NSPQVDGSPPGLEGL-p Q8WVB6-2;S899-p NSPQVDGSPPGLEGL 0.518987067569368 0.299766829926687 0.0853333333333333 0.101666666666667 5.26037620880862 6.90700069998509 0.0853333333333334 0.101666666666667 0.29782584257861 0.20384493740905 1.15156648928225 1.4443304242196 Q8WVB6 CHTF18 Q8WVB6.2.S899.p_CHTF18 Q8WVB6-2_S899s _1_1_899_899 Q8WVB6-2 A0A0D9SF58|Q8WVB6-2|E7EXA6|Q8WVB6-3 Isoform 2 of Chromosome transmission fidelity protein 18 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32071.32071.2 22.72 22.72 6.661 2 1 1 0 1444.245 2807.5191 S899s TMT10 890 (R) VENSPQVDGsPPGLEGLLGGIGEK (G) VENS(0.0)PQVDGS(0.99)PPGLEGLLGGIGEK K:TMT10,s:Phosphorylated S CHTF18 110890.8 14 5 1974.1 104.64 HUMAN 1 5.2604 6.907 NSPSPQDSPRLSSFT-p P08651;S343-p NSPSPQDSPRLSSFT 0.185461409283341 0.757064906312955 -0.206666666666667 -0.0476666666666667 14.3787845447974 1.67108620711662 -0.206666666666667 -0.0476666666666667 0.0364856044498925 0.680599113827976 -2.76273321721177 -0.434615991430699 P08651 NFIC P08651.S343.p_NFIC P08651_S343s _1_1_343_343 P08651 A0A286YEX4|P08651|P08651-2|P08651-6|P08651-3|P08651-5|P08651-4 Nuclear factor 1 C-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10957.10957.2 15.09 6.63 2.538 4 1 1 0 862.8959 1644.8179 S343s TMT10 333 (K) SPFNSPSPQDsPR (L) S(0.0)PFNS(0.0)PS(0.0)PQDS(0.99)PR s:Phosphorylated S NFIC 56130.4 3 12 674.1 247.72 HUMAN 1 -14.3788 -1.6711 NSPTICQTFVGRALQ-p P63128;T1097-p NSPTICQTFVGRALQ 0.411382195733206 0.188277658963683 0.141333333333333 0.183 7.1174015225912 9.53847470297863 0.141333333333333 0.183 0.19420474988864 0.111212225006672 1.48154848752632 1.90089771285857 P63128 NotFound P63128.T1097.p_NotFound P63128_S1091sT1093tT1097t_3_3_1091_1097 P63128 P63128 Endogenous retrovirus group K member 9 Pol protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.37619.37619.4 8.83 2.15 99 3 3 3 0 1072.554 4031.2694 M1088m S1091s T1093t T1097t TMT10 1079 (R) FQWKVLPQGmLNsPtICQtFVGRALQPVK (V) FQWKVLPQGM(1.0)LNS(1.0)PT(1.0)ICQT(1.0)FVGRALQPVK K:TMT10,C:Carbamidomethylation,m:Oxidized methionine,s:Phosphorylated S,t:Phosphorylated T ERVK-9 124759.1 2 1 6891.1 8.83 HUMAN 1 7.1174 9.5385 NSQPNRYTNRVVTLW-p P50750-2;T303-p NSQPNRYTNRVVTLW 0.716278239111013 0.019429497948105 0.072 0.389 2.73409495304287 23.507100874051 0.072 0.389 0.532832252204766 0.00445953844840629 0.665866404776471 4.66995914024919 P50750 CDK9 P50750.2.T303.p_CDK9 P50750-2_T303t _1_1_303_303 P50750-2 P50750|P50750-2 Isoform 2 of Cyclin-dependent kinase 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23936.23936.5 23.97 23.97 2.734 5 1 1 0 696.9683 3400.844 T303t TMT10 296 (K) NSQPNRYtNRVVTLWYRPPELLLGER (D) NS(0.0)QPNRY(0.0)T(0.99)NRVVT(0.0)LWY(0.0)RPPELLLGER t:Phosphorylated T CDK9 53763.6 6 2 1462.1 140.18 HUMAN 1 2.7341 23.5071 NSQSTPGSSGQRKRK-p A8CG34;S477-p NSQSTPGSSGQRKRK 0.20669136874683 0.00119273352423501 0.329333333333333 -1.15866666666667 13.236071800156 48.1989243190165 0.329333333333333 -1.15866666666667 0.047467113187157 1.51393618083016e-05 2.55369410044241 -14.5138792642859 A8CG34 NotFound A8CG34.S477.p_NotFound A8CG34_S477s _1_1_477_477 A8CG34 Q96HA1|A8CG34|A0A075B7F8|Q96HA1-3|A8CG34-2|A0A087WY75|Q96HA1-2|A6NF01 Nuclear envelope pore membrane protein POM 121C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3243.3243.3 16.23 13.62 1.198 6 1 1 0 734.3616 2121.1049 S477s TMT10 467 (K) QNSNSQSTPGsSGQRK (R) QNS(0.0)NS(0.0)QS(0.0)T(0.0)PGS(0.99)S(0.0)GQRK K:TMT10,s:Phosphorylated S POM121C 125455.9 1 26 133.2 532.02 HUMAN 1 13.2361 -48.1989 NSQTKRYSGNMEYVI-p O95835;S278-p NSQTKRYSGNMEYVI 0.190631727790508 0.0503819623961807 -0.204 -0.229333333333333 14.0765972867528 17.3434408012042 -0.204 -0.229333333333333 0.0391147241068158 0.018435542407864 -2.70699274361308 -3.3279873165863 O95835 LATS1 O95835.S278.p_LATS1 O95835_S278s _1_1_278_278 O95835 O95835|O95835-2 Serine/threonine-protein kinase LATS1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13249.13249.3 16.13 16.13 6.712 4 1 1 0 595.2843 1703.8737 S278s TMT10 276 (K) RYsGNMEYVISR (I) RY(0.0)S(0.99)GNMEY(0.0)VIS(0.0)R s:Phosphorylated S LATS1 127380.9 4 4 824.1 217.64 HUMAN 1 -14.0766 -17.3434 NSRGRSPSPIGVGSE-p Q9Y4B5;S1814-p NSRGRSPSPIGVGSE 0.549950036106406 0.757674682818682 0.0803333333333333 -0.032 4.79026032990636 1.66437409070687 0.0803333333333334 -0.032 0.33187456334094 0.681651807947657 1.06547821976595 -0.433074767374703 Q9Y4B5 MTCL1 Q9Y4B5.S1814.p_MTCL1 Q9Y4B5_S1812sS1814s_2_2_1812_1814 Q9Y4B5 Q9Y4B5|Q9Y4B5-3 Microtubule cross-linking factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20563.20563.5 14.64 7.95 2.4 8 2 2 0 1001.678 4844.4348 S1812s S1814s TMT10 1810 (R) GRsPsPIGVGSEMCREEGGEGTPVKQDLSAPPGYTLTENVAR (I) GRS(0.99)PS(0.99)PIGVGS(0.0)EMCREEGGEGT(0.0)PVKQDLS(0.0)APPGY(0.0)T(0.0)LT(0.0)ENVAR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTCL1 210777.5 1 10 1389.1 147.22 HUMAN 1 4.7903 -1.6644 NSRKRRESASSSSSV-p Q9NPF5;S454-p NSRKRRESASSSSSV 0.401913424081807 0.00176472384256938 -0.199 -0.936666666666667 7.30630733564133 43.551003742578 -0.199 -0.936666666666667 0.185938475738246 4.41468403265094e-05 -1.51453131236982 -11.8499343029904 Q9NPF5 DMAP1 Q9NPF5.S454.p_DMAP1 Q9NPF5_S454s _1_1_454_454 Q9NPF5 Q9NPF5 DNA methyltransferase 1-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3493.3493.3 11.72 11.72 2.388 6 1 1 0 597.6521 1710.975 S454s Hydrogen 452 (R) REsASSSSSVKK (A) RES(0.99)AS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)VKK K:TMT10-Lys-Only,s:Phosphorylated S DMAP1 53162.8 3 4 1615.1 127.51 HUMAN 1 -7.3063 -43.551 NSRMRAHSPAEGASV-p Q8NFG4;S62-p NSRMRAHSPAEGASV 0.0651075040180817 0.0372274075826922 0.399 0.271666666666667 25.6424449119662 19.2101973627002 0.399 0.271666666666667 0.00272744190496586 0.0119944479381249 5.20835026489303 3.70816657114895 Q8NFG4 FLCN Q8NFG4.S62.p_FLCN Q8NFG4_S62s _1_1_62_62 Q8NFG4 Q8NFG4|Q8NFG4-2|Q8NFG4-3 Folliculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5440.5440.2 22.9 22.9 10.343 5 1 1 0 1002.4669 1923.961 S62s Hydrogen 60 (R) AHsPAEGASVESSSPGPK (K) AHS(0.99)PAEGAS(0.0)VES(0.0)S(0.0)S(0.0)PGPK K:TMT10-Lys-Only,s:Phosphorylated S FLCN 65442.1 7 2 1292.1 157.11 HUMAN 1 25.6424 19.2102 NSRNGLESPTRSNAK-p A0A0J9YWL0;S140-p NSRNGLESPTRSNAK 0.694699286180922 0.0159712775629529 -0.064 -0.698666666666667 2.96810494792627 24.8217712121057 -0.064 -0.698666666666667 0.504881555513675 0.00329475312662024 -0.713926576168812 -4.99260450292186 A0A0J9YWL0 NotFound A0A0J9YWL0.S140.p_NotFound A0A0J9YWL0_S140s _1_1_140_140 A0A0J9YWL0 A0A0J9YWL0 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10942.10966.3 13.43 13.43 1.465 4 1 1 0 855.1451 2483.4549 S140s TMT10 136 (R) NGLEsPTRSNAKPLSPK (D) NGLES(0.99)PT(0.0)RS(0.0)NAKPLS(0.0)PK K:TMT10,s:Phosphorylated S CRYBG1 233643.7 7 1 79.1 640.71 HUMAN 1 -2.9681 -24.8218 NSRSVAATIPRRNTL-p Q9UQC2;T385-p NSRSVAATIPRRNTL 0.0511533852916271 0.00156125241407917 0.843 1.13666666666667 28.2681749503635 45.133205758731 0.843 1.13666666666667 0.0014899870882215 3.06675741581159e-05 5.92203405816832 12.6999946634885 Q9UQC2 GAB2 Q9UQC2.T385.p_GAB2 Q9UQC2_T385t _1_1_385_385 Q9UQC2 Q9UQC2|Q9UQC2-2 GRB2-associated-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7314.7314.3 9.52 9.52 9.522 2 1 1 0 427.2413 1199.7422 T385t TMT10 381 (R) SVAAtIPRR (N) S(0.0)VAAT(0.99)IPRR t:Phosphorylated T GAB2 74969.7 1 7 698.1 241.06 HUMAN 1 28.2682 45.1332 NSSCSVMSEEPEGRS-p Q96NY8;S437-p NSSCSVMSEEPEGRS 0.663469721811643 0.0766742196440831 -0.091 0.285333333333333 3.33401093749968 14.8005636971766 -0.091 0.285333333333333 0.464086469026869 0.0331088144753009 -0.787474262014909 2.83930712420844 Q96NY8 PVRL4 Q96NY8.S437.p_PVRL4 Q96NY8_S437s _1_1_437_437 Q96NY8 Q96NY8 Nectin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8205.8205.2 18.03 12.68 2.662 4 1 1 0 996.9 1912.8214 S437s TMT10 429 (K) DNSSCSVMsEEPEGR (S) DNS(0.0)S(0.0)CS(0.0)VMS(0.99)EEPEGR C:Carbamidomethylation,s:Phosphorylated S NECTIN4 55966.8 2 4 1903.1 108.23 HUMAN 1 -3.334 14.8006 NSSEGRASPHDVLET-p O75143-2;S324-p NSSEGRASPHDVLET 0.191102046396083 0.84070341577723 -0.242 -0.0376666666666667 14.0360235048349 1.05890502243715 -0.242 -0.0376666666666666 0.0394818641199288 0.783627192140696 -2.69953486613832 -0.288560905096204 O75143 ATG13 O75143.2.S324.p_ATG13 O75143-2_S324s _1_1_324_324 O75143-2 O75143|O75143-2|O75143-3|O75143-4 Isoform 2 of Autophagy-related protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23382.23382.3 12.37 12.37 12.372 2 1 1 0 641.006 1841.0482 S324s Hydrogen 323 (R) AsPHDVLETIFVRK (V) AS(0.99)PHDVLET(0.0)IFVRK K:TMT10-Lys-Only,s:Phosphorylated S ATG13 53335.2 3 2 1719.1 119.58 HUMAN 1 -14.036 -1.0589 NSSKRRSSLPNGEGL-p Q9ULR3;S124-p NSSKRRSSLPNGEGL 0.973184341125227 0.718580302147485 -0.005 -0.0363333333333333 0.229769313427861 1.97617353239726 -0.00500000000000001 -0.0363333333333333 0.948468842300446 0.634428445214486 -0.0676826076475803 -0.50346081054256 Q9ULR3 PPM1H Q9ULR3.S124.p_PPM1H Q9ULR3_S124s _1_1_124_124 Q9ULR3 Q9ULR3 Protein phosphatase 1H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12960.12960.2 13.59 5.52 1.426 2 1 1 0 854.4536 1627.9329 S124s Hydrogen 122 (R) RSsLPNGEGLQLK (E) RS(0.0)S(0.99)LPNGEGLQLK K:TMT10-Lys-Only,s:Phosphorylated S PPM1H 56960.5 39 3 820.1 218.82 HUMAN 1 -0.2298 -1.9762 NSSLNSTSNTKVSAV-p Q96KR1;S481-p NSSLNSTSNTKVSAV 1 0.0346747881525911 9.25185853854297e-18 -0.289333333333333 4.82163733276644e-16 19.6660971827687 1.60246890531964e-17 -0.289333333333333 1 0.0107991676092317 1.4872140888527e-16 -3.80417073781737 Q96KR1 ZFR Q96KR1.S481.p_ZFR Q96KR1_S481s _1_1_481_481 Q96KR1 Q96KR1 Zinc finger RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11798.11798.3 14.62 14.61 1.248 9 1 1 0 741.041 2141.145 S481s TMT10 468 (K) GLTTTGNSSLNSTsNTK (V) GLT(0.0)T(0.0)T(0.0)GNS(0.0)S(0.0)LNS(0.0)T(0.0)S(0.99)NT(0.0)K K:TMT10,s:Phosphorylated S ZFR 118151.1 1 3 1692.1 120.73 HUMAN 1 0 -19.6661 NSSQKEPTGRVEIRK-p Q8TBA6;T135-p NSSQKEPTGRVEIRK 0.131896337928271 0.186906162402123 -0.325666666666667 -0.175333333333333 18.171377159147 9.58079495109109 -0.325666666666667 -0.175333333333333 0.0152356954930459 0.110133769755365 -3.4970320902637 -1.9082274724909 Q8TBA6 GOLGA5 Q8TBA6.T135.p_GOLGA5 Q8TBA6_S116sT135t_2_2_116_135 Q8TBA6 Q8TBA6|Q8TBA6-2 Golgin subfamily A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24680.24680.5 10.51 10.51 1.434 4 2 2 0 803.4177 3853.1266 S116s T135t TMT10 113 (R) RKKsEPDDELLFDFLNSSQKEPtGR (V) RKKS(0.99)EPDDELLFDFLNS(0.0)S(0.0)QKEPT(0.99)GR K:TMT10,s:Phosphorylated S,t:Phosphorylated T GOLGA5 83080 5 9 909.1 201.86 HUMAN 1 -18.1714 -9.5808 NSSSRKESAPQVLLP-p Q14155-5;S645-p NSSSRKESAPQVLLP 0.139286671509888 0.00683011918389872 -0.344 0.513666666666667 17.521433526022 31.0716843070841 -0.344 0.513666666666667 0.0176952477440196 0.000781324727747722 -3.36605191967988 6.75371786518038 Q14155 ARHGEF7 Q14155.5.S645.p_ARHGEF7 Q14155-5_S645s _1_1_645_645 Q14155-5 Q14155-5|B1ALK7 Isoform 5 of Rho guanine nucleotide exchange factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25518.25518.4 20.29 15.66 14.647 2 1 1 0 852.2365 3325.964 S645s TMT10 643 (R) KEsAPQVLLPEEEKIIVEETK (S) KES(0.99)APQVLLPEEEKIIVEET(0.0)K K:TMT10,s:Phosphorylated S ARHGEF7 83311.3 5 12 434.1 313.68 HUMAN 1 -17.5214 31.0717 NSSSVTVSDPEMENK-p A4D104;S64-p NSSSVTVSDPEMENK 0.470168256615413 0.866707262753281 0.0993333333333333 0.0206666666666667 6.04972330863041 0.875164437189599 0.0993333333333334 0.0206666666666667 0.248329131209197 0.817492084604053 1.29341655176973 0.242241306079246 A4D104 UMAD1 A4D104.S64.p_UMAD1 A4D104_S64s_1_1_64_64 A4D104 A4D104|C9J7I0 HCG19535 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17059.17059.4 15.35 14.39 0 8 1 1 0 1016.2443 3980.985 N57n S64s TMT10 42 (K) TSDIEANQPLETNKEnSSSVTVsDPEMENK (A) T(0.0)S(0.0)DIEAN(0.0)QPLET(0.0)N(0.50)KEN(0.50)S(0.0)S(0.0)S(0.0)VT(0.0)VS(0.99)DPEMEN(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S LOC401307 15256.6 1 2 4647.1 28.38 HUMAN 1 6.0497 0.8752 NSSTAAKSFEDLTDH-p P78536;S791-p NSSTAAKSFEDLTDH 0.450058328130941 0.0196409770321092 -0.115666666666667 0.409666666666667 6.40530002366538 23.4304493615922 -0.115666666666667 0.409666666666667 0.228807363911935 0.00453894650044955 -1.35645750065061 4.65159261182288 P78536 ADAM17 P78536.S791.p_ADAM17 P78536_S791s _1_1_791_791 P78536 P78536 Disintegrin and metalloproteinase domain-containing protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14387.14387.3 20.59 20.59 3.239 3 1 1 0 575.9398 1645.8383 S791s TMT10 791 (K) sFEDLTDHPVTR (S) S(0.99)FEDLT(0.0)DHPVT(0.0)R s:Phosphorylated S ADAM17 95016.2 5 1 2327.1 87.73 HUMAN 1 -6.4053 23.4304 NSSTDQGSDEEGSLQ-p Q12789;S1068-p NSSTDQGSDEEGSLQ 0.0332552830156115 0.012047157109076 0.626666666666667 0.471666666666667 34.4562950303911 26.8054504043654 0.626666666666667 0.471666666666667 0.000358402059797078 0.00208667570472804 7.91121059519105 5.50852959756861 Q12789 GTF3C1 Q12789.S1068.p_GTF3C1 Q12789_S1068s _1_1_1068_1068 Q12789 Q12789|Q12789-3 General transcription factor 3C polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12483.12483.4 20.69 20.69 4.365 6 1 1 0 842.6425 3287.5788 S1068s TMT10 1061 (K) NSSTDQGsDEEGSLQKEQESAMDK (H) NS(0.0)S(0.0)T(0.0)DQGS(0.99)DEEGS(0.0)LQKEQES(0.0)AMDK K:TMT10,s:Phosphorylated S GTF3C1 241209.8 16 6 225.1 425.73 HUMAN 1 34.4563 26.8055 NSSVHTGSDVEQDAE-p Q9ULU4-19;S471-p NSSVHTGSDVEQDAE 0.471566782528917 0.148427198719736 0.104 -0.171333333333333 6.02458964895057 10.9078298270226 0.104 -0.171333333333333 0.249770437815136 0.0811366397004626 1.28894286236062 -2.13901454994501 Q9ULU4 ZMYND8 Q9ULU4.19.S471.p_ZMYND8 Q9ULU4-19_S471s _1_1_471_471 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-10|Q9ULU4-13|Q9ULU4-23|Q9ULU4-15|A0A087WYS3|Q9ULU4-17|Q9ULU4-6|Q9ULU4-3|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-18|Q9ULU4-21|Q9ULU4-8|A0A087WV57|Q9ULU4-4 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10593.10593.4 18.04 18.04 1.154 7 1 1 0 776.1315 3021.5402 S471s TMT10 459 (R) SPMSTNSSVHTGsDVEQDAEKK (A) S(0.0)PMS(0.0)T(0.0)NS(0.0)S(0.0)VHT(0.0)GS(0.99)DVEQDAEKK K:TMT10,s:Phosphorylated S ZMYND8 139738.7 3 5 57.1 712.18 HUMAN 1 6.0246 -10.9078 NSSVNRASPVNASAS-p Q9H9J4;S494-p NSSVNRASPVNASAS 0.32819113420903 0.764778052016055 -0.151666666666667 0.035 9.04620614800032 1.60840627104344 -0.151666666666667 0.035 0.124560225329584 0.690493147383924 -1.81636181150868 0.420176272258925 Q9H9J4 USP42 Q9H9J4.S494.p_USP42 Q9H9J4_S494s _1_1_494_494 Q9H9J4 Q9H9J4|Q9H9J4-2 Ubiquitin carboxyl-terminal hydrolase 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14762.14762.4 23.7 23.7 1.206 12 1 1 0 975.9509 3820.8106 S494s TMT10 475 (K) DTPSSSMSSPNGNSSVNRAsPVNASASVQNWSVNR (S) DT(0.0)PS(0.0)S(0.0)S(0.0)MS(0.0)S(0.0)PNGNS(0.0)S(0.0)VNRAS(0.99)PVNAS(0.0)AS(0.0)VQNWS(0.0)VNR s:Phosphorylated S USP42 146872.9 1 2 255.1 399.37 HUMAN 1 -9.0462 1.6084 NSSYSFESDFDLTKS-p Q15751;S1578-p NSSYSFESDFDLTKS 0.993618410078581 0.209461515579807 -0.00233333333333335 -0.138666666666667 0.0575765772520694 8.93106628581269 -0.00233333333333336 -0.138666666666667 0.986829996687508 0.127906722724986 -0.0172832761784022 -1.79578943122886 Q15751 HERC1 Q15751.S1578.p_HERC1 Q15751_S1578s _1_1_1578_1578 Q15751 Q15751 Probable E3 ubiquitin-protein ligase HERC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.32101.32101.3 20.85 20.85 1.748 6 1 1 0 918.0813 2672.2591 S1578s TMT10 1567 (R) DWLCNSSYSFEsDFDLTK (S) DWLCNS(0.0)S(0.0)Y(0.0)S(0.0)FES(0.99)DFDLT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HERC1 539122.1 2 11 269.1 394.57 HUMAN 1 -0.0576 -8.9311 NSTMLGASGDYADFQ-p P28070;S99-p NSTMLGASGDYADFQ 0.0651075040180817 0.00543474895042961 -0.610666666666667 -0.757333333333333 25.632677026721 32.8629004546506 -0.610666666666667 -0.757333333333334 0.00273358320382176 0.000517261261377191 -5.20581985008634 -7.33960501851238 P28070 PSMB4 P28070.S99.p_PSMB4 P28070_S99s _1_1_99_99 P28070 P28070 Proteasome subunit beta type-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27752.27752.3 16.9 16.9 1.28 5 1 1 0 911.4419 2652.338 S99s TMT10 90 (R) VNNSTMLGAsGDYADFQYLK (Q) VNNS(0.0)T(0.0)MLGAS(0.99)GDY(0.0)ADFQY(0.0)LK K:TMT10,s:Phosphorylated S PSMB4 29260.8 1 2 4268.1 34.45 HUMAN 1 -25.6327 -32.8629 NSTNCKKTPPEDCEG-p P49790-3;T619-p NSTNCKKTPPEDCEG 0.791634956034985 0.0650706726666069 -0.05 0.215333333333333 1.95898718786912 15.7905905924176 -0.05 0.215333333333333 0.636944044424937 0.0263597289831766 -0.499700180943141 3.02598039961296 P49790 NUP153 P49790.3.T619.p_NUP153 P49790-3_T619t _1_1_619_619 P49790-3 P49790-3 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19672.19672.4 14.18 7.08 99 1 1 1 0 713.6304 2771.5369 T619t TMT10 618 (K) KtPPEDCEGPFRPAEILK (E) KT(1.0)PPEDCEGPFRPAEILK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T NUP153 158989.2 2 25 64.1 696.53 HUMAN 1 -1.959 15.7906 NSVAVLQTPPDIQSE-p Q8NEZ4-3;T1219-p NSVAVLQTPPDIQSE 0.269424134699647 0.856467800874828 0.219 -0.018 10.7957538838144 0.948395943553974 0.219 -0.018 0.0832577387860995 0.803822957481756 2.12036433626542 -0.260858009866825 Q8NEZ4 KMT2C Q8NEZ4.3.T1219.p_KMT2C Q8NEZ4-3_T1219t _1_1_1219_1219 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20643.20665.3 14.62 15.76 4.799 4 1 1 0 919.1379 2675.4314 T1219t TMT10 1208 (K) IINQNSVAVLQtPPDIQSEHSR (D) IINQNS(0.0)VAVLQT(0.99)PPDIQS(0.0)EHS(0.0)R t:Phosphorylated T KMT2C 554869.1 1 9 88.1 626.31 HUMAN 1 10.7958 -0.9484 NSVMKSASTEELRNP-p Q14678;S881-p NSVMKSASTEELRNP 0.341280214844005 0.157463630941297 -0.147 -0.207 8.67357217811182 10.5588217103772 -0.147 -0.207 0.135719665998009 0.0879261037850611 -1.75185746098233 -2.07809272195982 Q14678 KANK1 Q14678.S881.p_KANK1 Q14678_S881s _1_1_881_881 Q14678 Q14678|Q14678-2 KN motif and ankyrin repeat domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12911.12911.2 15.4 15.4 1.171 3 1 1 0 1080.5425 2080.1075 S881s TMT10 879 (K) SAsTEELRNPDFQK (T) S(0.0)AS(0.99)T(0.0)EELRNPDFQK K:TMT10,s:Phosphorylated S KANK1 149112.3 3 4 2363.1 86.5 HUMAN 1 -8.6736 -10.5588 NSVPQKSSPFLTRVP-p Q9HBD1;S580-p NSVPQKSSPFLTRVP 0.0773024022825936 0.0161347105288124 -0.359666666666667 -0.467666666666667 23.8108945032232 24.7547583920003 -0.359666666666667 -0.467666666666667 0.00415824955463506 0.00334598631826272 -4.74878105224311 -4.97580041113185 Q9HBD1 RC3H2 Q9HBD1.S580.p_RC3H2 Q9HBD1_S580s _1_1_580_580 Q9HBD1 Q9HBD1|Q9HBD1-4|Q9HBD1-6 Roquin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12136.12136.2 10.56 5.4 1.332 3 1 1 0 558.7875 1036.5989 S580s TMT10 579 (K) SsPFLTR (V) S(0.0)S(0.99)PFLT(0.0)R s:Phosphorylated S RC3H2 132864.3 2 2 1922.1 106.92 HUMAN 1 -23.8109 -24.7548 NSVQSGESDSDEEEE-p O75592;S143-p NSVQSGESDSDEEEE 0.870551152614169 0.14020172371019 -0.0295 0.159833333333333 1.17908604196753 11.2430257506608 -0.0295 0.159833333333333 0.76223940384934 0.0751099417088214 -0.318216053862264 2.19772513568424 O75592 MYCBP2 O75592.S143.p_MYCBP2 O75592_S143sS145s_2_2_143_145 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19500.19500.5 19.98 19.98 2.162 5 2 2 0 767.781 3674.9418 S143s S145s TMT10 136 (K) NSVQSGEsDsDEEEESKEPPIKLPK (I) NS(0.0)VQS(0.0)GES(0.99)DS(0.99)DEEEES(0.0)KEPPIKLPK K:TMT10,s:Phosphorylated S MYCBP2 518176.7 4 24 252.1 405.77 HUMAN 2 -1.1791 11.243 NSVTPLASPEPTKKP-p A0A1W2PR17;S467-p NSVTPLASPEPTKKP 0.0217780195589434 0.111204692073766 -0.762666666666667 -0.167333333333333 38.659401679815 12.5921163002666 -0.762666666666667 -0.167333333333333 0.000136163225932507 0.0550539355324616 -9.56556558794051 -2.4365346471358 A0A1W2PR17 NotFound A0A1W2PR17.S467.p_NotFound A0A1W2PR17_S467s _1_1_467_467 A0A1W2PR17 A0A1W2PR17|Q16875-4|Q5VX20|Q16875-2|Q5W015|Q16875-3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14640.14640.2 15.12 15.12 3.668 4 1 1 0 940.004 1799.0315 S467s TMT10 460 (R) NSVTPLAsPEPTK (K) NS(0.0)VT(0.0)PLAS(0.99)PEPT(0.0)K K:TMT10,s:Phosphorylated S PFKFB3 65177.2 2 4 2634.1 75.78 HUMAN 1 -38.6594 -12.5921 NSVTVAKSP______-p P62899-2;S127-p NSVTVAKSP______ 0.108274227113564 0.0277238968700976 -0.301 -0.311 20.2660764151287 21.1093140818348 -0.301 -0.311 0.00940572676685402 0.00774584124792503 -3.93628734356294 -4.11704154131717 P62899 RPL31 P62899.2.S127.p_RPL31 P62899-2_S127s _1_1_127_127 P62899-2 P62899-2 Isoform 2 of 60S ribosomal protein L31 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25278.25278.3 8.22 8.22 2.791 4 1 1 0 618.3562 1773.0886 S127s TMT10 116 (K) ISVLNSVTVAKsP (-) IS(0.0)VLNS(0.0)VT(0.0)VAKS(0.99)P K:TMT10,s:Phosphorylated S RPL31 14632 1 3 2041.1 101.13 HUMAN 1 -20.2661 -21.1093 NSWQLVETPEKRKEE-p Q9Y2H0;T915-p NSWQLVETPEKRKEE 0.512647526186485 0.00344325143052596 -0.115333333333333 -0.606666666666667 5.36369791987438 36.820917802792 -0.115333333333333 -0.606666666666667 0.29082397627358 0.000207925722728329 -1.17030973687682 -8.78935930337335 Q9Y2H0 DLGAP4 Q9Y2H0.T915.p_DLGAP4 Q9Y2H0_T915t _1_1_915_915 Q9Y2H0 Q9Y2H0|Q9Y2H0-1|Q9Y2H0-3|A0A0B4J2C2|F8WF49 Disks large-associated protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16146.16146.3 18.66 12.67 7.117 2 1 1 0 699.3693 2016.1278 T915t TMT10 907 (K) ANSWQLVEtPEKR (K) ANS(0.0)WQLVET(0.99)PEKR K:TMT10,t:Phosphorylated T DLGAP4 108980 16 9 298.1 378.69 HUMAN 1 -5.3637 -36.8209 NSWVPGLSPGGSRRP-p Q9P206-3;S515-p NSWVPGLSPGGSRRP 0.297571003658287 0.464746870139062 0.149333333333333 0.0703333333333333 9.89941123770569 4.43772850608952 0.149333333333333 0.0703333333333333 0.102343172698611 0.359937544354237 1.96423993403059 0.99974707648706 Q9P206 KIAA1522 Q9P206.3.S515.p_KIAA1522 Q9P206-3_S515s _1_1_515_515 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22534.22534.5 33.01 33.01 1.431 6 1 1 0 852.2158 4177.0835 S515s TMT10 481 (K) QQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLsPGGSR (R) QQPQLPRPPT(0.0)T(0.0)GGS(0.0)EGAGAAPCPPNPANS(0.0)WVPGLS(0.99)PGGS(0.0)R C:Carbamidomethylation,s:Phosphorylated S KIAA1522 108782.6 16 20 62.1 704.36 HUMAN 1 9.8994 4.4377 NSYQRNSSPEDRYEE-p Q9HCG8;S28-p NSYQRNSSPEDRYEE 0.214755630324117 0.706013143400195 0.183666666666667 0.0396666666666667 12.8744379912127 2.07649829371414 0.183666666666667 0.0396666666666667 0.0515888920548072 0.619940730380321 2.4884657496331 0.525615375189562 Q9HCG8 CWC22 Q9HCG8.S28.p_CWC22 Q9HCG8_S28s _1_1_28_28 Q9HCG8 Q9HCG8 Pre-mRNA-splicing factor CWC22 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4529.4744.3 12.38 8.26 1.153 3 1 1 0 649.9479 1867.862 S28s TMT10 26 (R) NSsPEDRYEEQER (S) NS(0.0)S(0.99)PEDRY(0.0)EEQER s:Phosphorylated S CWC22 106034.9 2 1 1128.1 174.64 HUMAN 1 12.8744 2.0765 NSYYIGKSPKKISSP-p Q96QE3;S1201-p NSYYIGKSPKKISSP 0.677572033046536 0.000952253650599092 -0.101 -1.76333333333333 3.1652900045558 61.1042320364559 -0.101 -1.76333333333333 0.482470761508377 7.75491061429571e-07 -0.753789186898964 -25.2922721850399 Q96QE3 ATAD5 Q96QE3.S1201.p_ATAD5 Q96QE3_S1201s _1_1_1201_1201 Q96QE3 Q96QE3|A0A075B754|Q96QE3-2 ATPase family AAA domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20462.20462.4 17.11 11.96 4.365 5 1 1 0 862.2093 3365.8486 S1201s TMT10 1183 (K) QGVNSQKPCFFNSYYIGKsPK (K) QGVNS(0.0)QKPCFFNS(0.0)Y(0.0)Y(0.0)IGKS(0.99)PK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ATAD5 209620.3 6 31 316.2 367.51 HUMAN 1 -3.1653 -61.1042 NTADHDESPPRTPTG-p O95251;S124-p NTADHDESPPRTPTG 0.332256356782789 0.00701753853914177 0.157333333333333 0.519 8.93707863264281 30.8577896113102 0.157333333333333 0.519 0.127729771936188 0.000820769177382354 1.79747075903884 6.68641390521263 O95251 KAT7 O95251.S124.p_KAT7 O95251_S124sT128t_2_2_124_128 O95251 O95251 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14084.14084.4 17.88 17.88 1.21 11 2 2 0 1174.2793 4533.1654 S124s T128t N132n TMT10 117 (K) NTADHDEsPPRtPTGnAPSSESDIDISSPNVSHDESIAK (D) N(0.0)T(0.0)ADHDES(0.99)PPRT(0.99)PT(0.0)GN(0.99)APS(0.0)S(0.0)ES(0.0)DIDIS(0.0)S(0.0)PN(0.0)VS(0.0)HDES(0.0)IAK K:TMT10,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated KAT7 71325.8 1 17 691.1 243.06 HUMAN 1 8.9371 30.8578 NTAEQPPSPAQLSHG-p Q01826-2;S284-p NTAEQPPSPAQLSHG 0.950634221481699 0.847177818923163 0.012 -0.0253333333333333 0.433584154421334 1.01158048583372 0.012 -0.0253333333333333 0.904985424394903 0.792212975621269 0.125067195285256 -0.276753451539813 Q01826 SATB1 Q01826.2.S284.p_SATB1 Q01826-2_S284s_1_1_284_284 Q01826-2 Q01826-2 Isoform 2 of DNA-binding protein SATB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25289.25289.5 20.35 20.35 1.538 9 1 1 0 1171.559 5772.7642 N277n S284s Hydrogen 246 (K) TKDMMVEMDSLSELSQQGANHVNFGQQPVPGnTAEQPPsPAQLSHGSQPSVR (T) T(0.0)KDMMVEMDS(0.0)LS(0.0)ELS(0.0)QQGAN(0.0)HVN(0.0)FGQQPVPGN(0.99)T(0.0)AEQPPS(0.99)PAQLS(0.0)HGS(0.0)QPS(0.0)VR K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S SATB1 89467.4 3 5 821.1 218.79 HUMAN 1 0.4336 -1.0116 NTASCPLSPIKMCLN-p Q8N3X6-3;S282-p NTASCPLSPIKMCLN 0.0511533852916271 0.00275466353441747 -0.441 -0.884333333333333 28.2712575820612 38.7623353074654 -0.441 -0.884333333333333 0.00148892986739216 0.000132973919246786 -5.92291296723481 -9.58837513616002 Q8N3X6 LCORL Q8N3X6.3.S282.p_LCORL Q8N3X6-3_S282s _1_1_282_282 Q8N3X6-3 Q8N3X6-3 Isoform 3 of Ligand-dependent nuclear receptor corepressor-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21022.21022.3 22.06 22.06 2.427 4 1 1 0 795.0712 2303.2317 S282s TMT10 269 (K) LNVSDENTASCPLsPIK (M) LNVS(0.0)DENT(0.0)AS(0.0)CPLS(0.99)PIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LCORL 36205.9 1 1 5186.1 22.06 HUMAN 1 -28.2713 -38.7623 NTAWGSPSPEAAGYP-p Q765P7;S649-p NTAWGSPSPEAAGYP 0.213251150765665 0.358280012288423 0.251333333333333 -0.138666666666667 12.9389552259817 5.91454062313461 0.251333333333333 -0.138666666666667 0.0508281704221757 0.256180422570642 2.50007277885016 -1.26902684929018 Q765P7 MTSS1L Q765P7.S649.p_MTSS1L Q765P7_S649s _1_1_649_649 Q765P7 Q765P7|A0A087WXN9 MTSS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21595.21595.4 29.75 29.75 3.123 5 1 1 0 980.4684 3838.8946 S649s TMT10 637 (K) RLSLPNTAWGSPsPEAAGYPGAGAEDEQQQLAANR (H) RLS(0.0)LPNT(0.0)AWGS(0.0)PS(0.99)PEAAGY(0.0)PGAGAEDEQQQLAANR s:Phosphorylated S MTSS1L 80498.5 2 11 425.1 319.48 HUMAN 1 12.939 -5.9145 NTDLGENSGIGKLFT-p Q6P0N0;S1104-p NTDLGENSGIGKLFT 0.42064448546641 0.237071382283059 -0.13 -0.149 6.93804189873456 8.23384847876274 -0.13 -0.149 0.202393150193413 0.150181055437709 -1.4501633578429 -1.67515715073149 Q6P0N0 MIS18BP1 Q6P0N0.S1104.p_MIS18BP1 Q6P0N0_S1104s _1_1_1104_1104 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21531.21531.3 15.25 15.25 6.751 3 1 1 0 696.6846 2008.0751 S1104s TMT10 1094 (K) TPFNTDLGENsGIGK (L) T(0.0)PFNT(0.0)DLGENS(0.99)GIGK K:TMT10,s:Phosphorylated S MIS18BP1 129996 6 35 54.1 728.39 HUMAN 1 -6.938 -8.2338 NTEISENSSDLSQKL-p Q9P0K7;S478-p NTEISENSSDLSQKL 0.541322545375636 0.0263581786161247 0.0823333333333333 -0.299333333333333 4.91663818339675 21.4475278112039 0.0823333333333333 -0.299333333333333 0.322356314367124 0.00716551185533537 1.08875923847851 -4.19243296317981 Q9P0K7 RAI14 Q9P0K7.S478.p_RAI14 Q9P0K7_S478s _1_1_478_478 Q9P0K7 Q9P0K7-2|Q9P0K7-3|Q9P0K7-4 Ankycorbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17677.17677.3 17.13 17.13 1.116 5 1 1 0 1015.8394 2965.5301 S478s TMT10 463 (R) RAELVCLNNTEISENsSDLSQK (L) RAELVCLNNT(0.0)EIS(0.0)ENS(0.99)S(0.0)DLS(0.0)QK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RAI14 110666.9 3 16 498.1 292.24 HUMAN 1 4.9166 -21.4475 NTELKTQSPEFEAQS-p Q9H5H4;S160-p NTELKTQSPEFEAQS 0.272673028464694 0.00358460126670815 -0.329333333333333 0.645 10.6904541225056 36.4294269725752 -0.329333333333333 0.645 0.0853010913780615 0.000227539763703477 -2.10196373353973 8.63562807979651 Q9H5H4 ZNF768 Q9H5H4.S160.p_ZNF768 Q9H5H4_S160s _1_1_160_160 Q9H5H4 Q9H5H4|H3BS42 Zinc finger protein 768 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10707.10707.2 15.05 11.9 3.07 4 1 1 0 938.9588 1796.9431 S160s TMT10 158 (K) TQsPEFEAQSSK (F) T(0.0)QS(0.99)PEFEAQS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ZNF768 61482.8 4 139 240.2 415.72 HUMAN 1 -10.6905 36.4294 NTEQELHSPTVKLTT-p Q8WVV4-1;S123-p NTEQELHSPTVKLTT 0.580202729011992 0.271306642674479 0.0913333333333333 -0.113 4.34738430521855 7.4615137304622 0.0913333333333333 -0.113 0.367503576107713 0.179410818265324 0.982976832097942 -1.54112681195188 Q8WVV4 POF1B Q8WVV4.1.S123.p_POF1B Q8WVV4-1_S123s _1_1_123_123 Q8WVV4-1 Q8WVV4-1|Q8WVV4-3 Isoform 1 of Protein POF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17473.17473.4 19.68 19.68 2 8 1 1 0 833.4262 3250.7142 S123s TMT10 103 (K) ISTCAPSTLHITQNTEQELHsPTVK (L) IS(0.0)T(0.0)CAPS(0.0)T(0.0)LHIT(0.0)QNT(0.0)EQELHS(0.99)PT(0.0)VK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S POF1B 69550.4 1 3 2520.1 80.14 HUMAN 1 4.3474 -7.4615 NTETLNKSSQGSSSS-p Q9ULU4-19;S1112-p NTETLNKSSQGSSSS 0.501661079883118 0.0255511911338801 -0.105666666666667 -0.316 5.52497563153058 21.6697525055188 -0.105666666666667 -0.316 0.280222134501955 0.00680808155286189 -1.19945223018845 -4.24241630460258 Q9ULU4 ZMYND8 Q9ULU4.19.S1112.p_ZMYND8 Q9ULU4-19_S1112s _1_1_1112_1112 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6309.6309.3 15.78 15.78 1.207 12 1 1 0 837.392 2430.1996 S1112s TMT10 1112 (K) sSQGSSSSTQSAPSETASASK (E) S(0.99)S(0.0)QGS(0.0)S(0.0)S(0.0)S(0.0)T(0.0)QS(0.0)APS(0.0)ET(0.0)AS(0.0)AS(0.0)K K:TMT10,s:Phosphorylated S ZMYND8 139738.7 2 18 57.1 712.18 HUMAN 1 -5.525 -21.6698 NTETPAATPKSGKHK-p P55201-2;T145-p NTETPAATPKSGKHK 0.17942090217629 0.676691163179896 -0.278666666666667 0.0423333333333334 14.728501462623 2.31697623285546 -0.278666666666667 0.0423333333333334 0.0336627703058014 0.586546404207869 -2.82768479777175 0.577836999430574 P55201 BRPF1 P55201.2.T145.p_BRPF1 P55201-2_T145t _1_1_145_145 P55201-2 P55201-2|P55201-3|P55201-4 Isoform 2 of Peregrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7635.7635.2 10.16 7.77 3.47 3 1 1 0 848.9326 1616.8896 T145t TMT10 137 (K) ENTETPAAtPK (S) ENT(0.0)ET(0.0)PAAT(0.99)PK K:TMT10,t:Phosphorylated T BRPF1 139837.6 1 4 723.1 237.03 HUMAN 1 -14.7285 2.317 NTETPAPSPTVVRPK-p Q8IX03-2;S899-p NTETPAPSPTVVRPK 0.152207539398086 0.912206998745954 -0.436333333333333 -0.0136666666666666 16.4591294488242 0.558849908796092 -0.436333333333333 -0.0136666666666667 0.0225988872362041 0.879255328892381 -3.15685187109988 -0.15922419937289 Q8IX03 WWC1 Q8IX03.2.S899.p_WWC1 Q8IX03-2_S899s _1_1_899_899 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12669.12669.4 16.2 16.2 2 5 1 1 0 734.1532 2853.6289 S899s TMT10 887 (K) VDKETNTETPAPsPTVVRPK (D) VDKET(0.0)NT(0.0)ET(0.0)PAPS(0.99)PT(0.0)VVRPK K:TMT10,s:Phosphorylated S WWC1 126701.1 3 14 312.1 370.85 HUMAN 1 -16.4591 -0.5588 NTETPQITPPPVMIL-p A6NMQ1;T180-p NTETPQITPPPVMIL 0.958272913067913 0.0569226674808608 -0.00800000000000001 -0.305666666666667 0.359332000033885 16.5855815797408 -0.00800000000000002 -0.305666666666667 0.920591159454015 0.0219503698396794 -0.104428075486577 -3.17910235566692 A6NMQ1 POLA1 A6NMQ1.T180.p_POLA1 A6NMQ1_T180t _1_1_180_180 A6NMQ1 A6NMQ1|P09884|A0A087WU64 DNA polymerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.37651.37651.4 24.59 20.78 1.716 3 1 1 0 868.226 3389.9006 T180t TMT10 162 (K) DGLLGDILQDLNTETPQItPPPVMILK (K) DGLLGDILQDLNT(0.0)ET(0.0)PQIT(0.99)PPPVMILK K:TMT10,t:Phosphorylated T POLA1 168280.1 3 1 1873.1 109.8 HUMAN 1 -0.3593 -16.5856 NTFKRPQTPPKIDYL-p Q8TDM6;T984-p NTFKRPQTPPKIDYL 0.32547538724767 0.0140093853411862 -0.268 0.403666666666667 9.13017080111739 25.722066379462 -0.268 0.403666666666667 0.122175160967095 0.00267789387584945 -1.83089852327767 5.22224473236595 Q8TDM6 DLG5 Q8TDM6.T984.p_DLG5 Q8TDM6_T984t _1_1_984_984 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17917.17917.5 12.74 11.16 4.436 4 1 1 0 689.9865 3365.9301 T984t TMT10 981 (K) RPQtPPKIDYLLPGPGPAHSPQPSK (R) RPQT(0.99)PPKIDY(0.0)LLPGPGPAHS(0.0)PQPS(0.0)K K:TMT10,t:Phosphorylated T DLG5 215575.4 1 21 34.1 890.58 HUMAN 1 -9.1302 25.7221 NTFMRGGSSKDLLDN-p A0A0U1RQK7;S1345-p NTFMRGGSSKDLLDN 0.213516296888393 0.0499480861666657 0.35 -0.364 12.9256201084885 17.4010953616824 0.35 -0.364 0.0509844794057835 0.0181924195817828 2.49767266444619 -3.3394362664507 A0A0U1RQK7 NotFound A0A0U1RQK7.S1345.p_NotFound A0A0U1RQK7_S1345s _1_1_1345_1345 A0A0U1RQK7 A0A0U1RQK7|A0A0A0MSA7|O43432-3|O43432-4 Eukaryotic translation initiation factor 4 gamma 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10282.10282.3 17.19 9.12 1.115 3 1 1 0 810.3971 2349.2047 S1345s TMT10 1343 (R) GGsSKDLLDNQSQEEQR (R) GGS(0.99)S(0.0)KDLLDNQS(0.0)QEEQR K:TMT10,s:Phosphorylated S EIF4G3 196410.6 4 7 857.1 210.84 HUMAN 1 12.9256 -17.4011 NTFSVVPSPKVSDTV-p P07437;S172-p NTFSVVPSPKVSDTV 0.834327857608735 0.338481446517104 -0.0953333333333333 0.308 1.51857004518826 6.23339823154653 -0.0953333333333333 0.308 0.704925133890566 0.238045610083338 -0.399333998275386 1.32571000027817 P07437 TUBB P07437.S172.p_TUBB P07437_S172s _1_1_172_172 P07437 A0A0B4J269|Q13509|P68371|P07437|P04350|Q5JP53|Q13509-2|Q5ST81 Tubulin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26562.26562.3 17.49 17.49 6.089 3 1 1 0 620.0039 1778.0286 S172s TMT10 163 (R) IMNTFSVVPsPK (V) IMNT(0.0)FS(0.0)VVPS(0.99)PK K:TMT10,s:Phosphorylated S TUBB 50126.4 2 12 333.1 357.15 HUMAN 1 -1.5186 6.2334 NTHHLHSSSDDEDDR-p Q9UPN7;S530-p NTHHLHSSSDDEDDR 0.732651492896551 0.0652241331926333 0.0646666666666667 0.290666666666667 2.55773366401058 15.7754553778286 0.0646666666666667 0.290666666666667 0.554915216116138 0.0264517532132927 0.629056826632145 3.02309406122307 Q9UPN7 PPP6R1 Q9UPN7.S530.p_PPP6R1 Q9UPN7_S529sS530sS531s_3_3_529_531 Q9UPN7 Q9UPN7 Serine/threonine-protein phosphatase 6 regulatory subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16579.16579.4 13.27 13.27 13.267 4 3 3 0 844.6204 3135.5529 S529s S530s S531s TMT10 517 (K) NMVDLVNTHHLHsssDDEDDRLK (E) NMVDLVNT(0.0)HHLHS(0.99)S(0.99)S(0.99)DDEDDRLK K:TMT10,s:Phosphorylated S PPP6R1 97349.5 4 8 1319.1 154.5 HUMAN 1 2.5577 15.7755 NTHKLRLSPNEEAFI-p Q9C0D2-3;S14-p NTHKLRLSPNEEAFI 0.140621777582522 0.646190042031014 -0.533 -0.0583333333333333 17.4379456115988 2.58579207099329 -0.533 -0.0583333333333333 0.018038708428723 0.551341638924626 -3.34939598870379 -0.634866554535944 Q9C0D2 CEP295 Q9C0D2.3.S14.p_CEP295 Q9C0D2-3_S14s _1_1_14_14 Q9C0D2-3 Q9C0D2-3 Isoform 3 of Centrosomal protein of 295 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26576.26576.3 16.44 16.44 99 1 1 1 0 690.0603 1988.1945 S14s TMT10 11 (K) LRLsPNEEAFILK (E) LRLS(1.0)PNEEAFILK K:TMT10,s:Phosphorylated S CEP295 296782.5 1 1 1911.1 107.86 HUMAN 1 -17.4379 -2.5858 NTHLSTFSFTKVDVG-p A0FGR8-4;S32-p NTHLSTFSFTKVDVG 0.883845724742002 0.0734100397529774 0.028 -0.224666666666667 1.0597268242269 15.0629491897002 0.028 -0.224666666666667 0.783478922860306 0.0311677233992208 0.288793893761432 -2.88837121141399 A0FGR8 ESYT2 A0FGR8.4.S32.p_ESYT2 A0FGR8-4_S32sT34t_2_2_32_34 A0FGR8-4 A0FGR8-4 Isoform 4 of Extended synaptotagmin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9129.9129.5 8.02 8.02 2.354 6 2 2 0 973.2815 4702.4719 S32s T34t Acetyl 1 (-) MWPFICQFIEKLFRETIEPAVRGANTHLSTFsFtK (V) MWPFICQFIEKLFRET(0.0)IEPAVRGANT(0.0)HLS(0.0)T(0.0)FS(0.99)FT(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T ESYT2 59744.5 1 1 1886.2 109.02 HUMAN 1 1.0597 -15.0629 NTIDLPMSPRTLDSL-p P40763;S727-p NTIDLPMSPRTLDSL 0.636657897799904 0.027590049228953 -0.0633333333333333 -0.306666666666667 3.65794077812268 21.1432779211365 -0.0633333333333334 -0.306666666666667 0.430730794534003 0.00768550143315669 -0.85115259745029 -4.12457575926177 P40763 STAT3 P40763.S727.p_STAT3 P40763_S727s _1_1_727_727 P40763 P40763|P40763-2|G8JLH9 Signal transducer and activator of transcription 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24440.24440.4 25.23 25.23 5.905 7 1 1 0 770.1369 2997.5612 S727s TMT10 708 (K) TKFICVTPTTCSNTIDLPMsPR (T) T(0.0)KFICVT(0.0)PT(0.0)T(0.0)CS(0.0)NT(0.0)IDLPMS(0.99)PR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S STAT3 88865 16 4 2293.1 89.42 HUMAN 1 -3.6579 -21.1433 NTIPIIGSPSSKRRS-p O94988-1;S530-p NTIPIIGSPSSKRRS 0.762412776352502 0.66973423584515 0.0466666666666667 0.041 2.25621640743811 2.37961630058149 0.0466666666666667 0.041 0.594810134147514 0.578147124480251 0.564823994672414 0.591247408622125 O94988 FAM13A O94988.1.S530.p_FAM13A O94988-1_S530s _1_1_530_530 O94988-1 O94988|O94988-1|O94988-5|O94988-6|E9PGM7 Isoform 1 of Protein FAM13A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22090.22090.3 12.85 12.85 3.815 4 1 1 0 608.3416 1743.0417 S530s TMT10 522 (R) ANTIPIIGsPSSK (R) ANT(0.0)IPIIGS(0.99)PS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S FAM13A 80530.9 3 2 3515.1 49.28 HUMAN 1 2.2562 2.3796 NTIRSGISPNLNVVD-p Q6UVJ0;S510-p NTIRSGISPNLNVVD 0.949207015586855 0.0191457300895062 0.00999999999999999 -0.324333333333333 0.4488476769023 23.6218758331498 0.00999999999999999 -0.324333333333333 0.90181038519683 0.00434322588197171 0.129273672880788 -4.69755009515417 Q6UVJ0 SASS6 Q6UVJ0.S510.p_SASS6 Q6UVJ0_S510s _1_1_510_510 Q6UVJ0 Q6UVJ0 Spindle assembly abnormal protein 6 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18022.18022.2 12.74 10.19 4.122 2 1 1 0 818.9155 1556.8594 S510s TMT10 507 (R) SGIsPNLNVVDGR (L) S(0.0)GIS(0.99)PNLNVVDGR s:Phosphorylated S SASS6 74908.8 1 1 5697.1 17.05 HUMAN 1 0.4488 -23.6219 NTKDFDSSEDEKHSK-p P46100;S850-p NTKDFDSSEDEKHSK 0.638049908822708 0.0878791840660886 0.098 -0.22 3.64200841503445 13.9811033334786 0.098 -0.22 0.432313859244347 0.0399843155934307 0.848049205246825 -2.68783994317659 P46100 ATRX P46100.S850.p_ATRX P46100_S849sS850s_2_2_849_850 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8623.8623.4 10.1 10.1 10.102 3 2 2 0 568.5105 2111.086 S849s S850s TMT10 846 (K) DFDssEDEKHSK (K) DFDS(0.99)S(0.99)EDEKHS(0.0)K K:TMT10,s:Phosphorylated S ATRX 285034.2 13 49 18.1 1035.36 HUMAN 1 3.642 -13.9811 NTKIPCKSPPPELTD-p P46013;S2588-p NTKIPCKSPPPELTD 0.287082709473723 0.00575569388165388 0.264333333333333 -0.578 10.2236112543489 32.398269190117 0.264333333333333 -0.578 0.0949814673362839 0.000575669315250928 2.02058755257453 -7.18371378416955 P46013 MKI67 P46013.S2588.p_MKI67 P46013_S2588s _1_1_2588_2588 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15563.15563.4 16.5 16.5 1.127 7 1 1 0 821.4526 3202.8163 S2588s TMT10 2581 (K) NTKIPCKsPPPELTDTATSTK (R) NT(0.0)KIPCKS(0.99)PPPELT(0.0)DT(0.0)AT(0.0)S(0.0)T(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MKI67 360912.4 6 89 5.1 1918.46 HUMAN 1 10.2236 -32.3983 NTKKANNSQEPSPQL-p Q96HC4;S309-p NTKKANNSQEPSPQL 0.152026163448554 0.450270642482757 0.281666666666667 -0.081 16.4717766446568 4.61948862851546 0.281666666666667 -0.081 0.0225331721955621 0.345184381587867 3.15930863755211 -1.03364619735754 Q96HC4 PDLIM5 Q96HC4.S309.p_PDLIM5 Q96HC4_S309sS313s_2_2_309_313 Q96HC4 Q96HC4|Q96HC4-4|Q96HC4-7 PDZ and LIM domain protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12266.12266.3 12.39 7.32 3.503 6 2 2 0 897.4338 2530.3626 S309s S313s TMT10 305 (K) KANNsQEPsPQLASSVASTR (S) KANNS(0.99)QEPS(0.99)PQLAS(0.0)S(0.0)VAS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S PDLIM5 65142.1 2 7 2505.1 80.72 HUMAN 1 16.4718 -4.6195 NTLKRVSSLAGFTDC-p Q96QT4;S1477-p NTLKRVSSLAGFTDC 0.473587306301374 0.921561680751789 0.104333333333333 0.01 5.9770514231897 0.498611957069107 0.104333333333333 0.01 0.252519463338291 0.891535835209356 1.28047438926221 0.142891677775923 Q96QT4 TRPM7 Q96QT4.S1477.p_TRPM7 Q96QT4_S1477s _1_1_1477_1477 Q96QT4 Q96QT4|H0YLN8 Transient receptor potential cation channel subfamily M member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11650.11650.3 14.8 14.8 1.119 3 1 1 0 605.624 1734.8907 S1477s TMT10 1474 (K) RVSsLAGFTDCHR (T) RVS(0.0)S(0.99)LAGFT(0.0)DCHR C:Carbamidomethylation,s:Phosphorylated S TRPM7 214804.2 5 9 965.1 193.95 HUMAN 1 5.9771 0.4986 NTLQCPKTPLRQDLE-p Q96JN0-3;T375-p NTLQCPKTPLRQDLE 0.110631891590881 0.715222575174842 -0.380666666666667 0.044 20.0085029940908 2.00348023187106 -0.380666666666667 0.0440000000000001 0.00998044028666074 0.630451927453424 -3.88077543886291 0.509513430142294 Q96JN0 LCOR Q96JN0.3.T375.p_LCOR Q96JN0-3_T375t _1_1_375_375 Q96JN0-3 Q96JN0-3|A0A1P0AZG4 Isoform 3 of Ligand-dependent corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13397.13397.5 14.27 10.9 2.141 2 1 1 0 744.5883 3638.9528 T375t TMT10 367 (K) ENTLQCPKtPLRQDLEANEQDARPK (Q) ENT(0.0)LQCPKT(0.99)PLRQDLEANEQDARPK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T LCOR 172300.7 1 7 673.1 247.79 HUMAN 1 -20.0085 2.0035 NTLVVKKSDVEAIFS-p P07910-2;S31-p NTLVVKKSDVEAIFS 0.918974244252321 0.75292225678543 -0.018 0.039 0.715054537502215 1.7021596123416 -0.018 0.039 0.848192731015344 0.675746863782703 -0.200791849547479 0.441735430462079 P07910 HNRNPC P07910.2.S31.p_HNRNPC P07910-2_S31s _1_1_31_31 P07910-2 P07910-2|O60812|B2RXH8|A0A0G2JNQ3|B7ZW38|G3V4C1 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35045.35045.4 19.65 19.65 2.34 3 1 1 0 855.2541 3338.0269 S31s TMT10 18 (R) VFIGNLNTLVVKKsDVEAIFSK (Y) VFIGNLNT(0.0)LVVKKS(0.99)DVEAIFS(0.0)K K:TMT10,s:Phosphorylated S HNRNPC 32394 1 11 261.1 397.39 HUMAN 1 -0.7151 1.7022 NTMLPFVSNRTTFFT-p Q9BXF9;S85-p NTMLPFVSNRTTFFT 0.278653304461677 0.355497410476298 -0.172 -0.111333333333333 10.495170935725 5.95734651619062 -0.172 -0.111333333333333 0.0892242500762567 0.25366780349934 -2.06788546241208 -1.27665979193925 Q9BXF9 TEKT3 Q9BXF9.S85.p_TEKT3 Q9BXF9_S85s_1_1_85_85 Q9BXF9 Q9BXF9|J3KPT7 Tektin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18907.18907.3 7.14 1.53 7.143 3 1 1 0 607.2945 1722.9046 N78n M80m S85s TMT10 75 (R) VSEnTmLPFVsNR (T) VS(0.0)EN(0.99)T(0.0)M(1.0)LPFVS(0.99)N(0.0)R n:Deamidated,m:Oxidized methionine,s:Phosphorylated S TEKT3 57148.4 1 1 7250.1 7.14 HUMAN 1 -10.4952 -5.9573 NTMNGSKSPVISRPK-p A0A0U1RRM6;S740-p NTMNGSKSPVISRPK 0.795054081011152 0.454676331881345 -0.045 -0.123333333333333 1.92457255824637 4.56401890956326 -0.045 -0.123333333333333 0.642011406510082 0.349621481716743 -0.492032533681237 -1.02332789618984 A0A0U1RRM6 NotFound A0A0U1RRM6.S740.p_NotFound A0A0U1RRM6_S740s_1_1_740_740 A0A0U1RRM6 A0A0U1RRM6|Q8N8S7|Q8N8S7-2|Q8N8S7-3 Protein enabled homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9488.9748.3 14.6 9.31 1.343 5 1 1 0 677.6827 1950.0843 N736n S740s TMT10 732 (R) TNTMnGSKsPVISR (P) T(0.0)N(0.0)T(0.0)MN(0.99)GS(0.0)KS(0.99)PVIS(0.0)R K:TMT10,n:Deamidated,s:Phosphorylated S ENAH 87740.8 8 10 794.2 224.28 HUMAN 1 -1.9246 -4.564 NTNAAEESLPEIQKE-p Q9NTJ3;S982-p NTNAAEESLPEIQKE 0.421883877305009 0.279057058329879 0.128333333333333 0.115 6.90384587562257 7.30298852907538 0.128333333333333 0.115 0.203993069296117 0.186080621150263 1.44417122282744 1.51351598494862 Q9NTJ3 SMC4 Q9NTJ3.S982.p_SMC4 Q9NTJ3_S982s _1_1_982_982 Q9NTJ3 Q9NTJ3|E9PD53 Structural maintenance of chromosomes protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16559.16559.3 13.76 13.76 9.402 2 1 1 0 694.6891 2002.0857 S982s TMT10 975 (K) NTNAAEEsLPEIQK (E) NT(0.0)NAAEES(0.99)LPEIQK K:TMT10,s:Phosphorylated S SMC4 147864 1 6 902.1 203.59 HUMAN 1 6.9038 7.303 NTPGNVGSGKDQCCS-p P22059;S338-p NTPGNVGSGKDQCCS 0.667543343748707 0.216995470474323 0.0653333333333333 0.169333333333333 3.2816683792979 8.73085312059542 0.0653333333333333 0.169333333333333 0.469713629443685 0.133941354949235 0.777064043311381 1.7611603017217 P22059 OSBP P22059.S338.p_OSBP P22059_S338s _1_1_338_338 P22059 P22059 Oxysterol-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15897.15897.3 12.29 11.23 2.162 3 1 1 0 693.3743 1998.1384 S338s TMT10 324 (R) GATVLPANTPGNVGsGK (D) GAT(0.0)VLPANT(0.0)PGNVGS(0.99)GK K:TMT10,s:Phosphorylated S OSBP 90274.8 2 7 468.1 302.79 HUMAN 1 3.2817 8.7309 NTPPVVISADQMVNE-p Q5UIP0;S1394-p NTPPVVISADQMVNE 0.640565849677383 0.0353661191291574 0.072 -0.489666666666667 3.61426153183707 19.5370277692282 0.072 -0.489666666666667 0.435084735531122 0.0111249283624204 0.842637724174068 -3.77685827576408 Q5UIP0 RIF1 Q5UIP0.S1394.p_RIF1 Q5UIP0_S1394s _1_1_1394_1394 Q5UIP0 Q5UIP0 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24842.24842.5 16.91 16.91 1.215 4 1 1 0 704.7554 3439.7779 S1394s TMT10 1386 (K) ENTPPVVIsADQMVNEDSQVQITPNQK (T) ENT(0.0)PPVVIS(0.99)ADQMVNEDS(0.0)QVQIT(0.0)PNQK K:TMT10,s:Phosphorylated S RIF1 276628.8 1 13 29.1 922.06 HUMAN 1 3.6143 -19.537 NTPQYLASPLDQEVV-p Q8TEK3;S741-p NTPQYLASPLDQEVV 0.338303322331957 0.148427198719736 0.182666666666667 0.263333333333333 8.75818796497014 10.9087983028558 0.182666666666667 0.263333333333333 0.133100964792564 0.0811185482631718 1.76650494239444 2.13918388572454 Q8TEK3 DOT1L Q8TEK3.S741.p_DOT1L Q8TEK3_S741s _1_1_741_741 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17603.17603.4 19.16 19.16 6.796 5 1 1 0 839.6684 3275.6793 S741s TMT10 733 (K) QNTPQYLAsPLDQEVVPCTPSHVGRPR (L) QNT(0.0)PQY(0.0)LAS(0.99)PLDQEVVPCT(0.0)PS(0.0)HVGRPR C:Carbamidomethylation,s:Phosphorylated S DOT1L 185648.6 1 8 132.1 534.85 HUMAN 1 8.7582 10.9088 NTPTRRVSPLNLSSV-p Q9UJX2;S588-p NTPTRRVSPLNLSSV 0.340149897057557 0.471745090119239 -0.203666666666667 -0.0876666666666667 8.71121761502944 4.34931309882582 -0.203666666666667 -0.0876666666666667 0.134548307316459 0.367340396238756 -1.7583742164653 -0.98316208919383 Q9UJX2 CDC23 Q9UJX2.S588.p_CDC23 Q9UJX2_S588s _1_1_588_588 Q9UJX2 Q9UJX2|Q9UJX2-3 Cell division cycle protein 23 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19285.19285.2 10.84 10.84 10.84 4 1 1 0 675.3444 1269.7161 S588s Hydrogen 586 (R) RVsPLNLSSVTP (-) RVS(0.99)PLNLS(0.0)S(0.0)VT(0.0)P s:Phosphorylated S CDC23 69631.7 7 5 2341.1 87.22 HUMAN 1 -8.7112 -4.3493 NTQDMSASQVDVAVK-p P54278;S603-p NTQDMSASQVDVAVK 0.938814714787851 0.024590064569084 0.0126666666666667 -0.317666666666667 0.53583050449253 21.9035982381483 0.0126666666666667 -0.317666666666667 0.883928118820935 0.00645119509940097 0.153018275012506 -4.2954028239312 P54278 PMS2 P54278.S603.p_PMS2 P54278_S603s _1_1_603_603 P54278 P54278|C9J167 Mismatch repair endonuclease PMS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22854.22854.3 12.11 12.25 1.298 3 1 1 0 781.7411 2263.2368 S603s TMT10 594 (K) LVNTQDMSAsQVDVAVK (I) LVNT(0.0)QDMS(0.0)AS(0.99)QVDVAVK K:TMT10,s:Phosphorylated S PMS2 96993.1 1 6 1932.1 106.31 HUMAN 1 0.5358 -21.9036 NTQIELQSSPDVQNS-p Q9UK61;S1551-p NTQIELQSSPDVQNS 0.792593719033847 0.798601580015462 0.0456666666666667 -0.0306666666666666 1.94721787588144 1.36634782285623 0.0456666666666666 -0.0306666666666667 0.638672493720475 0.730071201806136 0.497081071427247 -0.363368400008935 Q9UK61 FAM208A Q9UK61.S1551.p_FAM208A Q9UK61_S1551sS1552s_2_2_1551_1552 Q9UK61 Q9UK61 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25474.25474.3 10.93 10.93 4.234 4 2 2 0 959.4568 2716.4405 S1551s S1552s TMT10 1544 (K) NTQIELQssPDVQNSLLEDK (T) NT(0.0)QIELQS(0.99)S(0.99)PDVQNS(0.0)LLEDK K:TMT10,s:Phosphorylated S FAM208A 190568.5 3 23 246.1 411.17 HUMAN 1 1.9472 -1.3663 NTRAHSETPEIRKYK-p Q8N4C8;T1008-p NTRAHSETPEIRKYK 0.300478673172259 0.994279975197934 -0.200333333333333 -0.00133333333333332 9.81034600826612 0.035046192190304 -0.200333333333333 -0.0013333333333333 0.104463698826871 0.991962788523037 -1.94877913817484 -0.0105460517206604 Q8N4C8 MINK1 Q8N4C8.T1008.p_MINK1 Q8N4C8_T1008t _1_1_1008_1008 Q8N4C8 Q8N4C8|Q8N4C8-4|Q8N4C8-3|Q8N4C8-2|Q8N4C8-5 Misshapen-like kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5443.5443.4 9.57 9.57 1.177 2 1 1 0 427.2321 1625.9375 T1008t TMT10 1004 (R) AHSEtPEIRK (Y) AHS(0.0)ET(0.99)PEIRK K:TMT10,t:Phosphorylated T MINK1 150503.5 1 25 131.3 535.29 HUMAN 1 -9.8103 -0.035 NTRKPNVSPEKQRKN-p A0A0U1RR07;S154-p NTRKPNVSPEKQRKN 0.681659995508636 0.0815395327777236 -0.122 -0.291 3.12148393261942 14.4336566144664 -0.122 -0.291 0.487361935870064 0.0360275175621579 -0.744980867751698 -2.77116721801068 A0A0U1RR07 NotFound A0A0U1RR07.S154.p_NotFound A0A0U1RR07_S154s _1_1_154_154 A0A0U1RR07 A0A0U1RR07|Q9HCH5-13|Q9HCH5-6|Q9HCH5-14 Synaptotagmin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9249.9249.3 7.52 3.21 99 1 1 1 0 555.9901 1585.9881 S154s TMT10 150 (R) KPNVsPEK (Q) KPNVS(1.0)PEK K:TMT10,s:Phosphorylated S SYTL2 248167.3 2 2 1920.1 107.01 HUMAN 1 -3.1215 -14.4337 NTRLNNGSMALIIAR-p Q49MI3;S454-p NTRLNNGSMALIIAR 0.389117860533563 0.0152279806588181 -0.119666666666667 -0.38 7.58473096226338 25.1423617547361 -0.119666666666667 -0.38 0.174392138695969 0.00306029874740658 -1.5630278844723 -5.07354375468068 Q49MI3 CERKL Q49MI3.S454.p_CERKL Q49MI3_S454s_1_1_454_454 Q49MI3 Q49MI3|Q49MI3-2|Q49MI3-9 Ceramide kinase-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9734.9734.3 7.91 0.77 7.909 3 1 1 0 686.0243 1960.0959 S454s M455m TMT10 450 (R) LNNGsmALIIARNTSR (P) LNNGS(0.99)M(1.0)ALIIARNT(0.0)S(0.0)R s:Phosphorylated S,m:Oxidized methionine CERKL 63362.8 1 1 7069.1 7.91 HUMAN 1 -7.5847 -25.1424 NTRNRENSPSSQSAG-p Q9H2Y7;S1279-p NTRNRENSPSSQSAG 0.21300200203599 0.00387979257248964 -0.283666666666667 -0.579 12.9584618686411 35.6045759969782 -0.283666666666667 -0.579 0.0506003840555705 0.000275132820488674 -2.5035846615165 -8.31946341726997 Q9H2Y7 ZNF106 Q9H2Y7.S1279.p_ZNF106 Q9H2Y7_S1279s _1_1_1279_1279 Q9H2Y7 Q9H2Y7|Q9H2Y7-2|A0A0C4DGM5 Zinc finger protein 106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10583.10583.4 19.71 13.41 2.393 7 1 1 0 854.1826 3333.749 S1279s TMT10 1275 (R) NRENsPSSQSAGLSSINKEGEEPTK (G) NRENS(0.99)PS(0.0)S(0.0)QS(0.0)AGLS(0.0)S(0.0)INKEGEEPT(0.0)K K:TMT10,s:Phosphorylated S ZNF106 210818.9 11 8 170.1 490.3 HUMAN 1 -12.9585 -35.6046 NTRPGANSPEMWSEA-p Q92499;S481-p NTRPGANSPEMWSEA 0.996421434325015 0.0154079660923365 0.000666666666666665 0.367333333333333 0.0284772738473989 25.0687444045091 0.000666666666666659 0.367333333333333 0.993464316470716 0.00311261610028671 0.00857653555224393 5.05487696919104 Q92499 DDX1 Q92499.S481.p_DDX1 Q92499_S481s _1_1_481_481 Q92499 Q92499|F1T0B3|A0A087X2G1|Q92499-2|Q92499-3 ATP-dependent RNA helicase DDX1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17971.17971.3 19.74 14.23 2.851 3 1 1 0 847.7449 2461.2546 S481s TMT10 473 (K) DNTRPGANsPEMWSEAIK (I) DNT(0.0)RPGANS(0.99)PEMWS(0.0)EAIK K:TMT10,s:Phosphorylated S DDX1 83400.6 6 3 2710.1 73.19 HUMAN 1 0.0285 25.0687 NTRRAYTSEDEAWKS-p Q6ISB3;S31-p NTRRAYTSEDEAWKS 0.674821726576008 0.986494125098058 -0.0786666666666667 -0.00233333333333333 3.20003853061738 0.0887975548618378 -0.0786666666666667 -0.00233333333333332 0.47862584593409 0.979761217506561 -0.760757602928993 -0.0265594953891021 Q6ISB3 GRHL2 Q6ISB3.S31.p_GRHL2 Q6ISB3_S31s _1_1_31_31 Q6ISB3 Q6ISB3|Q6ISB3-2 Grainyhead-like protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16057.16057.2 9.31 9.31 1.104 3 1 1 0 869.4119 1657.8474 S31s TMT10 28 (R) AYTsEDEAWK (S) AY(0.0)T(0.0)S(0.99)EDEAWK K:TMT10,s:Phosphorylated S GRHL2 71446.2 3 1 651.1 254.16 HUMAN 1 -3.2 -0.0888 NTRTSAPSPTALKLA-p Q52LR7;S754-p NTRTSAPSPTALKLA 0.381314122231002 0.0149985430633291 0.122666666666667 0.416333333333333 7.73996352504875 25.2396732022598 0.122666666666667 0.416333333333333 0.168268819335044 0.00299248980689109 1.59001620710361 5.09829289883738 Q52LR7 EPC2 Q52LR7.S754.p_EPC2 Q52LR7_S754s _1_1_754_754 Q52LR7 Q52LR7 Enhancer of polycomb homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13564.13564.2 8.59 8.59 1.459 4 1 1 0 755.9167 1430.8619 S754s TMT10 750 (R) TSAPsPTALK (L) T(0.0)S(0.0)APS(0.99)PT(0.0)ALK K:TMT10,s:Phosphorylated S EPC2 91949.1 1 4 1676.1 121.76 HUMAN 1 7.74 25.2397 NTSKCPVTIPEDQKK-p O95453;T172-p NTSKCPVTIPEDQKK 0.259910887946739 0.0466166078752872 0.310666666666667 -0.606333333333333 11.098355547754 17.8119508718966 0.310666666666667 -0.606333333333334 0.0776541097572755 0.0165502635059335 2.1733494095631 -3.42154298966238 O95453 PARN O95453.T172.p_PARN O95453_T172t _1_1_172_172 O95453 O95453|O95453-3|O95453-2|F5H1Z4 Poly(A)-specific ribonuclease PARN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16629.16629.5 12.34 10.73 3.341 7 1 1 0 769.4015 3763.0052 T172t TMT10 150 (K) RSQANGAGALSYVSPNTSKCPVtIPEDQK (K) RS(0.0)QANGAGALS(0.0)Y(0.0)VS(0.0)PNT(0.0)S(0.0)KCPVT(0.99)IPEDQK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T PARN 73963.1 1 3 320.1 365.2 HUMAN 1 11.0984 -17.812 NTSRRGKSGFNSKSG-p P07910-2;S158-p NTSRRGKSGFNSKSG 0.148303739525478 0.55490732229333 0.43 -0.0783333333333333 16.7277399362642 3.44636017905414 0.43 -0.0783333333333333 0.021243496836501 0.452234803465407 3.20920148877777 -0.809578589250546 P07910 HNRNPC P07910.2.S158.p_HNRNPC P07910-2_S158s _1_1_158_158 P07910-2 G3V2Q1|A0A0G2JPF8|P07910-2|O60812|B2RXH8|A0A0G2JNQ3|B7ZW38|G3V4C1|B2R5W2|B4DY08|G3V576|P07910-3 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.6298.6298.2 7.87 1.07 7.874 2 1 1 0 681.863 1282.752 S158s Hydrogen 156 (R) GKsGFNSK (S) GKS(0.99)GFNS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S HNRNPC 32394 2 15 261.1 397.39 HUMAN 1 16.7277 -3.4464 NTTLYEGTWRRGSTA-p P07384;T374-p NTTLYEGTWRRGSTA 0.147090784109906 0.0385880085546755 0.285 0.304666666666667 16.8955297533447 18.9880553500787 0.285 0.304666666666667 0.0204384061267816 0.012623926723888 3.24208670395315 3.66185543295838 P07384 CAPN1 P07384.T374.p_CAPN1 P07384_T374t _1_1_374_374 P07384 P07384 Calpain-1 catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16322.16322.4 13.23 13.23 3.987 4 1 1 0 563.046 2169.1969 T374t TMT10 365 (R) KWNTTLYEGtWRR (G) KWNT(0.0)T(0.0)LY(0.0)EGT(0.99)WRR K:TMT10,t:Phosphorylated T CAPN1 82516.1 2 6 1866.1 110.2 HUMAN 1 16.8955 18.9881 NTTTEPASTMSPPPA-p Q9P275-2;S679-p NTTTEPASTMSPPPA 0.428106595253249 0.00354425123931495 0.131333333333333 -0.67 6.7838558935783 36.5576662966555 0.131333333333333 -0.67 0.209707716203804 0.000220919153435807 1.42312272040016 -8.68572110020715 Q9P275 USP36 Q9P275.2.S679.p_USP36 Q9P275-2_S679s_1_1_679_679 Q9P275-2 Q9P275|A0A075B784|Q9P275-2 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16776.16776.3 9.51 9.51 1.106 8 1 1 0 1046.895 3041.716 N672n S679s M681m TMT10 665 (K) LKSPVLSnTTTEPAsTmSPPPAK (K) LKS(0.0)PVLS(0.0)N(1.0)T(0.0)T(0.0)T(0.0)EPAS(0.99)T(0.0)M(1.0)S(0.0)PPPAK K:TMT10,n:Deamidated,s:Phosphorylated S,m:Oxidized methionine USP36 124218 18 11 241.1 413.35 HUMAN 1 6.7839 -36.5577 NTVEADGSNDEGYEA-p Q08AE8;S169-p NTVEADGSNDEGYEA 0.72251740159762 0.040078337686064 -0.0623333333333333 0.256333333333333 2.67055310038614 18.7332684185182 -0.0623333333333333 0.256333333333333 0.54068545898517 0.0133866885125619 -0.652665023393536 3.60910750426084 Q08AE8 SPIRE1 Q08AE8.S169.p_SPIRE1 Q08AE8_S169s_1_1_169_169 Q08AE8 Q08AE8|Q08AE8-2|Q08AE8-5 Protein spire homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33120.33120.5 18.76 18.76 1.344 4 1 1 0 1103.4928 5432.476 S169s N170n TMT10 143 (K) ENEERELSPPLEQLIDHMANTVEADGsnDEGYEAAEEGLGDEDEK (R) EN(0.0)EERELS(0.0)PPLEQLIDHMAN(0.0)T(0.0)VEADGS(0.99)N(0.99)DEGY(0.0)EAAEEGLGDEDEK K:TMT10,s:Phosphorylated S,n:Deamidated SPIRE1 86683.2 1 1 1694.1 120.62 HUMAN 1 -2.6706 18.7333 NTVKLLESPVPAAQV-p Q8IWB9;S119-p NTVKLLESPVPAAQV 0.0732853965819104 0.00595035680170763 -0.382333333333333 -0.781333333333333 24.4163984977335 32.1384753391135 -0.382333333333334 -0.781333333333333 0.00361709695666222 0.000611156543618728 -4.89747086489038 -7.09776452887054 Q8IWB9 TEX2 Q8IWB9.S119.p_TEX2 Q8IWB9_S119s _1_1_119_119 Q8IWB9 Q8IWB9-2|A0A087WVA8 Testis-expressed protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.36631.36631.5 26.87 24.86 8.704 14 1 1 0 918.0924 4506.4595 S119s TMT10 116 (K) LLEsPVPAAQVLSTVPLAVSPGSSSSGPLASSPSVSSLSEQK (T) LLES(0.99)PVPAAQVLS(0.0)T(0.0)VPLAVS(0.0)PGS(0.0)S(0.0)S(0.0)S(0.0)GPLAS(0.0)S(0.0)PS(0.0)VS(0.0)S(0.0)LS(0.0)EQK K:TMT10,s:Phosphorylated S TEX2 125928 1 1 300.1 376.78 HUMAN 1 -24.4164 -32.1385 NVAKVNDSWKERFLD-p P49454;S1988-p NVAKVNDSWKERFLD 0.129739749890184 0.00234769441382231 -0.290666666666667 -0.727 18.3719641505691 40.4210123960697 -0.290666666666667 -0.727 0.0145480098001945 9.07608930247852e-05 -3.53793869354255 -10.3223613107574 P49454 CENPF P49454.S1988.p_CENPF P49454_S1988s _1_1_1988_1988 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9510.9510.3 8.01 8.01 99 1 1 1 0 524.6033 1491.832 S1988s TMT10 1985 (K) VNDsWKER (F) VNDS(1.0)WKER K:TMT10,s:Phosphorylated S CENPF 371067.2 2 24 47.1 771.73 HUMAN 1 -18.372 -40.421 NVATQQNSLEQLEPD-p O00559-2;S86-p NVATQQNSLEQLEPD 0.808652261368213 0.0303707089430202 0.0363333333333333 -0.297 1.77146216883522 20.5188179461461 0.0363333333333333 -0.297 0.665049211854064 0.00887397509213637 0.457574049315974 -3.98733431160433 O00559 EBAG9 O00559.2.S86.p_EBAG9 O00559-2_S86s_1_1_86_86 O00559-2 O00559-2|E9PND3 Isoform 2 of Receptor-binding cancer antigen expressed on SiSo cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24989.24989.3 17.85 15.55 1.127 3 1 1 0 1064.1876 3109.5842 N85n S86s TMT10 73 (K) IEGGNGNVATQQnsLEQLEPDYFK (D) IEGGN(0.0)GN(0.0)VAT(0.0)QQN(0.99)S(0.99)LEQLEPDY(0.0)FK K:TMT10,n:Deamidated,s:Phosphorylated S EBAG9 29751.1 1 2 2390.1 85.52 HUMAN 1 1.7715 -20.5188 NVCGRAPSPTSSAGE-p O94964-2;S1541-p NVCGRAPSPTSSAGE 0.36552839250003 0.307357272631551 -0.202 0.147666666666667 8.1118887105768 6.77031917717522 -0.202 0.147666666666667 0.154458256734263 0.210362383191081 -1.65456491167384 1.42036623146918 O94964 SOGA1 O94964.2.S1541.p_SOGA1 O94964-2_S1541s _1_1_1541_1541 O94964-2 O94964-2|O94964-3 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12497.12497.4 18.41 16.3 2.208 8 1 1 0 1008.2674 3950.0863 S1541s TMT10 1539 (R) APsPTSSAGEEGTKKPEPLSPASYHQPEGVAR (I) APS(0.99)PT(0.0)S(0.0)S(0.0)AGEEGT(0.0)KKPEPLS(0.0)PAS(0.0)Y(0.0)HQPEGVAR K:TMT10,s:Phosphorylated S SOGA1 185623.3 8 22 215.1 433.51 HUMAN 1 -8.1119 6.7703 NVDGVAATPTAASAS-p Q9H2C2;T22-p NVDGVAATPTAASAS 0.827047603903646 0.0214922370290131 -0.0326666666666667 -0.333333333333333 1.58859292960804 22.8040826173558 -0.0326666666666667 -0.333333333333333 0.693650505393768 0.0052431434293593 -0.415634376306466 -4.5032767086869 Q9H2C2 ARV1 Q9H2C2.T22.p_ARV1 Q9H2C2_T22t _1_1_22_22 Q9H2C2 Q9H2C2|A0A0A0MRI7 Protein ARV1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11618.11618.3 15.88 15.88 2.733 5 1 1 0 769.0214 2225.0818 T22t TMT10 14 (K) GNVDGVAAtPTAASASCQYR (C) GNVDGVAAT(0.99)PT(0.0)AAS(0.0)AS(0.0)CQY(0.0)R C:Carbamidomethylation,t:Phosphorylated T ARV1 31622.3 1 1 5843.1 15.88 HUMAN 1 -1.5886 -22.8041 NVDRGAGSIREAGGA-p Q9UII2;S39-p NVDRGAGSIREAGGA 0.150479125848793 0.00455102858437049 0.326 0.627666666666667 16.5714128732598 34.3135048076216 0.326 0.627666666666667 0.022022099101623 0.000370381698747883 3.17869104278771 7.84487937481924 Q9UII2 ATPIF1 Q9UII2.S39.p_ATPIF1 Q9UII2_S39s _1_1_39_39 Q9UII2 Q9UII2|A0A0B4J230|Q9UII2-2|Q9UII2-3 ATPase inhibitor, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7128.7128.3 10.29 10.29 99 1 1 1 0 581.635 1662.9237 S39s Hydrogen 36 (R) GAGsIREAGGAFGKR (E) GAGS(1.0)IREAGGAFGKR K:TMT10-Lys-Only,s:Phosphorylated S ATPIF1 12248.6 3 1 4281.1 34.31 HUMAN 1 16.5714 34.3135 NVECARVYAENAIRK-p Q9HD42;Y48-p NVECARVYAENAIRK 0.23369265106713 0.635727290424665 0.255333333333333 -0.114333333333333 12.1012410820384 2.67747048067483 0.255333333333333 -0.114333333333333 0.0616418822867234 0.539824948418588 2.35030487523102 -0.654019145931766 Q9HD42 CHMP1A Q9HD42.Y48.p_CHMP1A Q9HD42_Y48y _1_1_48_48 Q9HD42 Q9HD42|F8VVT7|F8VUA2 Charged multivesicular body protein 1a GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12313.12313.2 17.15 7.34 99 1 1 1 0 622.8161 1164.6574 Y48y TMT10 47 (R) VyAENAIR (K) VY(1.0)AENAIR y:Phosphorylated Y CHMP1A 21759.5 2 1 209.1 17.15 HUMAN 1 12.1012 -2.6775 NVEELNKSKELLTVE-p P30622;S1140-p NVEELNKSKELLTVE 0.177928026787036 0.00568603869369778 0.247666666666667 -0.68 14.8513213409983 32.5246216502928 0.247666666666667 -0.68 0.0327241116618737 0.000559162238678591 2.85061260126376 -7.22582926815976 P30622 CLIP1 P30622.S1140.p_CLIP1 P30622_S1140s _1_1_1140_1140 P30622 P30622|P30622-1|P30622-2|J3KP58|F5H0N7 CAP-Gly domain-containing linker protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11341.11341.3 9.85 9.85 99 1 1 1 0 610.0111 1748.0521 S1140s TMT10 1133 (K) NVEELNKsK (E) NVEELNKS(1.0)K K:TMT10,s:Phosphorylated S CLIP1 162985.2 2 13 372.1 339.16 HUMAN 1 14.8513 -32.5246 NVEHVPLSLDRAMRL-p P20618;S195-p NVEHVPLSLDRAMRL 0.289754903438724 0.807370645795406 0.189666666666667 -0.0513333333333333 10.1432304483112 1.30017861785229 0.189666666666667 -0.0513333333333333 0.0967557881996819 0.741279753112416 2.00660583746289 -0.347532189531719 P20618 PSMB1 P20618.S195.p_PSMB1 P20618_S195s _1_1_195_195 P20618 P20618 Proteasome subunit beta type-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16909.16909.3 14.36 14.36 99 1 1 1 0 654.3202 1880.985 S195s TMT10 185 (K) NMQNVEHVPLsLDR (A) NMQNVEHVPLS(1.0)LDR s:Phosphorylated S PSMB1 26717.1 1 1 6058.1 14.36 HUMAN 1 10.1432 -1.3002 NVENAFFTLARDIKA-p P61006;T164-p NVENAFFTLARDIKA 0.633387977519939 0.729961018828838 0.074 0.0753333333333333 3.69321963848464 1.88323026064858 0.074 0.0753333333333333 0.427246030230911 0.648152161876569 0.858014389562242 0.482729531493113 P61006 RAB8A P61006.T164.p_RAB8A P61006_T164t _1_1_164_164 P61006 P61006 Ras-related protein Rab-8A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28673.28673.3 16.94 16.94 99 1 1 1 0 630.3209 1808.9856 T164t TMT10 154 (K) ANINVENAFFtLAR (D) ANINVENAFFT(1.0)LAR t:Phosphorylated T RAB8A 23838.9 1 7 2008.4 102.72 HUMAN 1 3.6932 1.8832 NVEQAFQTIARNALK-p P51149;T168-p NVEQAFQTIARNALK 0.746920700156285 0.150277269319722 0.051 0.351666666666667 2.40562653006339 10.8298495996224 0.051 0.351666666666667 0.57469490514901 0.0826066556565284 0.596868387956632 2.1253852041479 P51149 RAB7A P51149.T168.p_RAB7A P51149_T168t _1_1_168_168 P51149 P51149|C9J8S3|C9J4V0|C9J4S4 Ras-related protein Rab-7a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23325.23325.3 15.47 15.47 99 1 1 1 0 633.657 1818.9911 T168t TMT10 158 (K) EAINVEQAFQtIAR (N) EAINVEQAFQT(1.0)IAR t:Phosphorylated T RAB7A 23774.6 1 4 4165.1 36.4 HUMAN 1 2.4056 10.8298 NVEVEQESFFEGKNM-p A0A0G2JNW7;S62-p NVEVEQESFFEGKNM 0.540948825382371 0.112924439918613 -0.0856666666666667 -0.234333333333333 4.92328067062074 12.492752990772 -0.0856666666666667 -0.234333333333333 0.321863650721643 0.0563280479387794 -1.08997994602818 -2.4187870803685 A0A0G2JNW7 NotFound A0A0G2JNW7.S62.p_NotFound A0A0G2JNW7_S62s _1_1_62_62 A0A0G2JNW7 Q9Y666|A0A0G2JNW7|Q9Y666-2 Solute carrier family 12 member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28843.28843.4 17.1 17.1 10.995 2 1 1 0 721.0968 2801.4034 S62s TMT10 48 (R) ENSPFLNNVEVEQEsFFEGK (N) ENS(0.0)PFLNNVEVEQES(0.99)FFEGK K:TMT10,s:Phosphorylated S SLC12A7 120389 3 3 1247.2 162.14 HUMAN 1 -4.9233 -12.4928 NVGKGQPSVLQVVNL-p P00734;S521-p NVGKGQPSVLQVVNL 0.233200848442376 0.203840449726686 0.204 -0.127333333333333 12.1441164943932 9.08851054146886 0.204 -0.127333333333333 0.0610363213062738 0.123352781200871 2.35792318762673 -1.82302285843564 P00734 F2 P00734.S521.p_F2 P00734_S521s_1_1_521_521 P00734 P00734|E9PIT3 Prothrombin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32730.32730.5 7.48 4.72 7.484 5 1 1 0 963.8873 4719.5301 S521s M548m Hydrogen 518 (K) GQPsVLQVVNLPIVERPVCKDSTRIRITDNmFCAGYK (P) GQPS(0.99)VLQVVNLPIVERPVCKDS(0.0)T(0.0)RIRIT(0.0)DNM(1.0)FCAGY(0.0)K C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,m:Oxidized methionine F2 71519 1 1 7143.1 7.48 HUMAN 1 12.1441 -9.0885 NVGSPPKSPTHASPQ-p A0JNW5;S418-p NVGSPPKSPTHASPQ 0.0802188320632121 0.00546352537340617 -0.688333333333333 -0.520333333333333 23.4016739496175 32.823155579256 -0.688333333333333 -0.520333333333333 0.00456912042969619 0.000522016754328518 -4.65003003435297 -7.32615970630842 A0JNW5 UHRF1BP1L A0JNW5.S418.p_UHRF1BP1L A0JNW5_S418s _1_1_418_418 A0JNW5 A0JNW5|A0A0C4DGH6|A0JNW5-2 UHRF1-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4229.4229.5 22.63 22.63 1.152 6 1 1 0 650.335 3167.6801 S418s TMT10 409 (K) DHNVGSPPKsPTHASPQHTQTEK (D) DHNVGS(0.0)PPKS(0.99)PT(0.0)HAS(0.0)PQHT(0.0)QT(0.0)EK K:TMT10,s:Phosphorylated S UHRF1BP1L 165621.9 1 2 398.1 328.88 HUMAN 1 -23.4017 -32.8232 NVHSLQRSIEEHLPK-p Q96F81;S1380-p NVHSLQRSIEEHLPK 0.567346600654394 0.484933218408887 -0.140666666666667 0.067 4.53289083571313 4.19696331588628 -0.140666666666667 0.067 0.352136397110558 0.38045532620768 -1.01771695156925 0.954429449476277 Q96F81 DISP1 Q96F81.S1380.p_DISP1 Q96F81_S1380s _1_1_1380_1380 Q96F81 Q96F81 Protein dispatched homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12792.12792.3 10.51 5.05 99 1 1 1 0 497.6064 1410.8357 S1380s TMT10 1380 (R) sIEEHLPK (M) S(1.0)IEEHLPK K:TMT10,s:Phosphorylated S DISP1 174639.5 1 2 5393.1 19.75 HUMAN 1 -4.5329 4.197 NVIHPFLSRSLPIVF-p P26640;S570-p NVIHPFLSRSLPIVF 0.295154464069677 0.0328287773238588 0.189666666666667 0.365 9.98465348722677 20.015152302864 0.189666666666667 0.365 0.100353991590934 0.00996517132632345 1.97904435676096 3.87857012187987 P26640 VARS P26640.S570.p_VARS P26640_S570s _1_1_570_570 P26640 P26640|P26640-2 Valine--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16461.16461.3 11.29 8.35 99 1 1 1 0 464.5849 1311.7735 S570s TMT10 563 (K) NVIHPFLsR (S) NVIHPFLS(1.0)R s:Phosphorylated S VARS 141728.6 1 5 2729.1 72.52 HUMAN 1 9.9847 20.0152 NVKALQKSPGPQRER-p P15056;S419-p NVKALQKSPGPQRER 0.279347779570915 0.00536518424997561 0.385333333333333 -0.735666666666667 10.4708365072556 32.9705129634734 0.385333333333333 -0.735666666666667 0.0897255954771927 0.000504601693415832 2.06364294821375 -7.37611378542892 P15056 BRAF P15056.S419.p_BRAF P15056_S419s _1_1_419_419 P15056 P15056 Serine/threonine-protein kinase B-raf HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7050.7050.2 11.39 7.69 99 1 1 1 0 810.4551 1539.9371 S419s TMT10 415 (K) ALQKsPGPQR (E) ALQKS(1.0)PGPQR K:TMT10,s:Phosphorylated S BRAF 85177.1 4 22 441.1 311.96 HUMAN 1 10.4708 -32.9705 NVLARYASICQQNGI-p P04075;S176-p NVLARYASICQQNGI 0.401923670483933 0.131627159332459 0.119666666666667 0.272333333333333 7.30506312999076 11.6101964348176 0.119666666666667 0.272333333333333 0.185991752686025 0.0690208584455856 1.51431429829225 2.26229302479082 P04075 ALDOA P04075.S176.p_ALDOA P04075_S176s_1_1_176_176 P04075 P04075-2|P09972 Fructose-bisphosphate aldolase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29808.29808.4 18.11 15.42 3.022 2 1 1 0 890.7043 3478.8292 S176s N181n TMT10 174 (R) YAsICQQnGIVPIVEPEILPDGDHDLK (R) Y(0.0)AS(0.99)ICQQN(1.0)GIVPIVEPEILPDGDHDLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated ALDOA 39875.7 1 6 1050.1 183.91 HUMAN 1 7.3051 11.6102 NVLCLSKSPNKHNRL-p P13639;S595-p NVLCLSKSPNKHNRL 0.0511487796737011 0.0049895765153361 -0.63 -1.42766666666667 28.3690672426731 33.5695115246174 -0.63 -1.42766666666667 0.00145577171083098 0.000439591055931022 -5.95085244142712 -7.58215251526993 P13639 EEF2 P13639.S595.p_EEF2 P13639_S595s_1_1_595_595 P13639 P13639 Elongation factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21554.21554.4 12.54 8.27 1.107 8 1 1 0 923.9755 3611.9194 N588n S595s TMT10 573 (K) SDPVVSYRETVSEESnVLCLSKsPNK (H) S(0.0)DPVVS(0.0)Y(0.0)RET(0.0)VS(0.0)EES(0.0)N(0.99)VLCLS(0.0)KS(0.99)PN(0.0)K C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S EEF2 96306.4 7 9 693.1 242.75 HUMAN 1 -28.3691 -33.5695 NVLGEVGSGFKVAMH-p P49748-3;S351-p NVLGEVGSGFKVAMH 0.671374778439016 0.315254540408639 -0.0963333333333334 0.147 3.24066842893979 6.62385058175274 -0.0963333333333334 0.147 0.474168999604858 0.217577980695696 -0.768884877137921 1.3946311168761 P49748 ACADVL P49748.3.S351.p_ACADVL P49748-3_S351s _1_1_351_351 P49748-3 P49748-3|P49748-2 Isoform 3 of Very long-chain specific acyl-CoA dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31589.31589.4 18.58 17.9 8.031 4 1 1 0 863.439 3370.7683 S351s TMT10 327 (K) ASNTAEVFFDGVRVPSENVLGEVGsGFK (V) AS(0.0)NT(0.0)AEVFFDGVRVPS(0.0)ENVLGEVGS(0.99)GFK K:TMT10,s:Phosphorylated S ACADVL 73325.2 1 1 2868.1 67.8 HUMAN 1 -3.2407 6.6239 NVLRWDLSPEQIKTR-p Q9BYT8;S53-p NVLRWDLSPEQIKTR 0.907131913243435 0.335743382074166 -0.0183333333333333 0.109333333333333 0.830820366737906 6.28151127361542 -0.0183333333333334 0.109333333333333 0.825881928700301 0.235422990791785 -0.23088598818696 1.33422997140614 Q9BYT8 NLN Q9BYT8.S53.p_NLN Q9BYT8_S53s _1_1_53_53 Q9BYT8 Q9BYT8 Neurolysin, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21098.21098.2 13.47 13.47 99 1 1 1 0 712.8563 1344.7361 S53s Hydrogen 50 (R) WDLsPEQIK (T) WDLS(1.0)PEQIK K:TMT10-Lys-Only,s:Phosphorylated S NLN 81392.1 2 2 4026.1 38.91 HUMAN 1 -0.8308 6.2815 NVNIYRDSAIPVESD-p Q96D46;S462-p NVNIYRDSAIPVESD 0.263866347377789 0.0263080103568939 -0.176333333333333 -0.290333333333333 10.9781176537896 21.474867969043 -0.176333333333333 -0.290333333333333 0.0798340634064541 0.00712054447016359 -2.15227617560217 -4.19856310414781 Q96D46 NMD3 Q96D46.S462.p_NMD3 Q96D46_S462s _1_1_462_462 Q96D46 C9JA08|Q96D46 60S ribosomal export protein NMD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16642.16642.3 11.12 11.12 3.76 4 1 1 0 948.1079 2762.343 S462s TMT10 455 (K) NVNIYRDsAIPVESDTDDEGAPR (I) NVNIY(0.0)RDS(0.99)AIPVES(0.0)DT(0.0)DDEGAPR s:Phosphorylated S NMD3 58800.3 1 5 1402.1 146.41 HUMAN 1 -10.9781 -21.4749 NVPLPKKSIQSGPLK-p Q16891-2;S103-p NVPLPKKSIQSGPLK 0.306383440584975 0.0169048692505771 0.188666666666667 0.344666666666667 9.62527148969598 24.4474238814461 0.188666666666667 0.344666666666667 0.109011634401626 0.00359134900680618 1.91667431840167 4.89923448856692 Q16891 IMMT Q16891.2.S103.p_IMMT Q16891-2_S103s _1_1_103_103 Q16891-2 Q16891|Q16891-4|Q16891-2|Q16891-3|B9A067 Isoform 2 of MICOS complex subunit MIC60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14127.14127.3 11.17 5.03 3.396 2 1 1 0 456.5947 1287.8037 S103s TMT10 103 (K) sIQSGPLK (I) S(0.99)IQS(0.0)GPLK K:TMT10,s:Phosphorylated S IMMT 83022.6 4 2 1057.1 182.65 HUMAN 1 9.6253 24.4474 NVPSGKSTDEEEEAQ-p Q9P2K3-3;T434-p NVPSGKSTDEEEEAQ 0.391198751974399 0.0325710532695654 0.164666666666667 0.277 7.51994665750468 20.0684765000732 0.164666666666667 0.277 0.177013069992655 0.0098435635625113 1.55175463886173 3.89000563786738 Q9P2K3 RCOR3 Q9P2K3.3.T434.p_RCOR3 Q9P2K3-3_S433sT434t_2_2_433_434 Q9P2K3-3 Q9P2K3-3 Isoform 3 of REST corepressor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10437.10651.4 15.53 15.53 1.148 6 2 2 0 784.1076 2973.4802 S433s T434t TMT10 424 (K) SASNVPSGKstDEEEEAQTPQAPR (T) S(0.0)AS(0.0)NVPS(0.0)GKS(0.99)T(0.99)DEEEEAQT(0.0)PQAPR K:TMT10,s:Phosphorylated S,t:Phosphorylated T RCOR3 61384.5 1 8 1817.1 112.96 HUMAN 1 7.5199 20.0685 NVPVSLESKKAARAA-p P82979;S118-p NVPVSLESKKAARAA 0.838434700075781 0.956698272139251 -0.0356666666666667 0.013 1.48052566804177 0.275642753939868 -0.0356666666666667 0.013 0.711127433906651 0.938503128339358 -0.390419068216335 0.0807954958622152 P82979 SARNP P82979.S118.p_SARNP P82979_S118s _1_1_118_118 P82979 F8VZQ9|P82979 SAP domain-containing ribonucleoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24838.24838.3 9.14 9.14 2.75 2 1 1 0 553.3061 1577.9303 S118s TMT10 110 (R) FNVPVSLEsK (K) FNVPVS(0.0)LES(0.99)K K:TMT10,s:Phosphorylated S SARNP 23727.4 1 2 3073.1 61.43 HUMAN 1 -1.4805 0.2756 NVQRWMRSCENLAPF-p Q13155;S305-p NVQRWMRSCENLAPF 0.924259199426179 0.106373117431212 0.024 0.229666666666667 0.674319549805676 12.8565534777431 0.024 0.229666666666667 0.85618584793715 0.0518017763147966 0.190063709558123 2.48390559723662 Q13155 AIMP2 Q13155.S305.p_AIMP2 Q13155_S305s _1_1_305_305 Q13155 Q13155|F8W950|A8MU58 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21505.21505.3 8.31 8.31 4.203 2 1 1 0 591.9534 1693.8781 S305s Hydrogen 305 (R) sCENLAPFNTALK (L) S(0.99)CENLAPFNT(0.0)ALK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S AIMP2 35690.5 1 2 3944.1 40.41 HUMAN 1 0.6743 12.8566 NVRKRNDSEEEERER-p Q9Y5B6;S16-p NVRKRNDSEEEERER 0.244382685227225 0.233077536653817 -0.659 0.270333333333333 11.7055140352079 8.32917170243405 -0.659 0.270333333333333 0.0675225128956714 0.146920646174596 -2.28020728815084 1.6916607501169 Q9Y5B6 PAXBP1 Q9Y5B6.S16.p_PAXBP1 Q9Y5B6_S16s _1_1_16_16 Q9Y5B6 Q9Y5B6|Q9Y5B6-2|Q9Y5B6-4|Q9Y5B6-3 PAX3- and PAX7-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2463.2463.3 8.48 8.48 99 1 1 1 0 491.5454 1392.6553 S16s TMT10 13 (K) RNDsEEEER (E) RNDS(1.0)EEEER s:Phosphorylated S PAXBP1 105258.2 1 1 978.1 192.69 HUMAN 1 -11.7055 8.3292 NVRSKVGSTENIKHQ-p E7EVA0;S2086-p NVRSKVGSTENIKHQ 0.94478758147709 0.428872905980211 -0.0136666666666667 -0.0886666666666667 0.488486061438915 4.89482603960643 -0.0136666666666667 -0.0886666666666666 0.893616941839612 0.323979399448699 -0.140141538019223 -1.08453341947579 E7EVA0 NotFound E7EVA0.S2086.p_NotFound E7EVA0_S2086s _1_1_2086_2086 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2|F8W9U4 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6299.6299.3 12.47 12.47 1.363 2 1 1 0 692.3649 1995.1136 S2086s TMT10 2084 (K) VGsTENIKHQPGGGR (A) VGS(0.99)T(0.0)ENIKHQPGGGR K:TMT10,s:Phosphorylated S MAP4 246695.2 13 40 38.1 865.62 HUMAN 1 -0.4885 -4.8948 NVRTTHYTPLACGSN-p O60832;T70-p NVRTTHYTPLACGSN 0.230129801548278 0.517097830920824 0.229 0.0936666666666667 12.2593530698536 3.84654157791972 0.229 0.0936666666666667 0.0594380691665347 0.412425815872387 2.37842284969755 0.887533723413677 O60832 DKC1 O60832.T70.p_DKC1 O60832_T70t _1_1_70_70 O60832 O60832|O60832-2 H/ACA ribonucleoprotein complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12542.12542.4 11.49 10.48 4.174 5 1 1 0 589.3087 2274.2429 T70t TMT10 66 (R) TTHYtPLACGSNPLKR (E) T(0.0)T(0.0)HY(0.0)T(0.99)PLACGS(0.0)NPLKR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T DKC1 58129.5 1 2 363.1 342.61 HUMAN 1 12.2594 3.8465 NVRVSNGSPSLERMD-p P46527;S10-p NVRVSNGSPSLERMD 0.418385958703744 0.00309364841118947 0.165 0.829 6.98250701322766 37.7100885292976 0.165 0.829 0.200331525749167 0.000169430326236021 1.45795080915309 9.1475894851058 P46527 CDKN1B P46527.S10.p_CDKN1B P46527_S10s _1_1_10_10 P46527 E7ES52|P46527 Cyclin-dependent kinase inhibitor 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7688.7688.2 12.69 7.18 1.641 3 1 1 0 677.8323 1274.6902 S10s TMT10 6 (R) VSNGsPSLER (M) VS(0.0)NGS(0.99)PS(0.0)LER s:Phosphorylated S CDKN1B 22301.1 1 1 2263.1 90.79 HUMAN 1 6.9825 37.7101 NVRWDHESVCKYYLC-p O95232;S33-p NVRWDHESVCKYYLC 0.303423649713577 0.0247321482775332 -0.198 -0.303666666666667 9.70566109398846 21.8634568844623 -0.198 -0.303666666666667 0.107012347362457 0.00651109919179923 -1.9306160321226 -4.28627866135608 O95232 LUC7L3 O95232.S33.p_LUC7L3 O95232_S33s _1_1_33_33 O95232 J3KPP4|O95232|O95232-2 Luc7-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10368.10368.3 9.26 9.26 99 1 1 1 0 533.5862 1518.7775 S33s TMT10 29 (R) WDHEsVCK (Y) WDHES(1.0)VCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LUC7L3 51864.7 1 2 1151.1 172.09 HUMAN 1 -9.7057 -21.8635 NVSDEVSSEEGPETG-p Q8N3S3;S336-p NVSDEVSSEEGPETG 0.960719111754911 0.0957805260467767 0.00766666666666667 0.197333333333333 0.334011719556805 13.4695691605221 0.00766666666666666 0.197333333333333 0.925974075791201 0.044982447727241 0.0973216896645831 2.59454962763581 Q8N3S3 PHTF2 Q8N3S3.S336.p_PHTF2 Q8N3S3_S331sS335sS336s_3_3_331_336 Q8N3S3 Q8N3S3|Q8N3S3-2|Q8N3S3-3|Q8N3S3-4|Q8N3S3-7|Q8N3S3-5|Q8N3S3-6 Putative homeodomain transcription factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22527.22527.3 12.64 12.64 3.951 8 3 3 0 947.0597 2599.2573 S331s S335s S336s TMT10 326 (R) TITNVsDEVssEEGPETGYSLR (R) T(0.0)IT(0.0)NVS(0.99)DEVS(0.99)S(0.99)EEGPET(0.0)GY(0.0)S(0.0)LR s:Phosphorylated S PHTF2 89782.6 3 3 3885.1 41.39 HUMAN 1 0.334 13.4696 NVTTRKVSAPDILKP-p Q4VX76;S243-p NVTTRKVSAPDILKP 0.616086876963662 0.0125557733612715 0.0783333333333333 0.513666666666667 3.90406866941482 26.5156607477118 0.0783333333333333 0.513666666666667 0.40699880403941 0.00223066280241658 0.898747283945815 5.43085607184757 Q4VX76 SYTL3 Q4VX76.S243.p_SYTL3 Q4VX76_S243s _1_1_243_243 Q4VX76 Q4VX76|Q4VX76-2 Synaptotagmin-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21166.21166.5 13.62 11.97 99 1 1 1 0 578.5397 2808.7005 S243s TMT10 241 (R) KVsAPDILKPLNQEDPK (C) KVS(1.0)APDILKPLNQEDPK K:TMT10,s:Phosphorylated S SYTL3 69756.5 3 5 1933.1 106.31 HUMAN 1 3.9041 26.5157 NVTVDVQSPACTSYQ-p Q9NQS7;S798-p NVTVDVQSPACTSYQ 0.462914985842141 0.833493897125893 0.107666666666667 0.0243333333333333 6.17321321883261 1.10798909436618 0.107666666666667 0.0243333333333333 0.241367436603352 0.774820478436492 1.31536197559863 0.300721161174184 Q9NQS7 INCENP Q9NQS7.S798.p_INCENP Q9NQS7_S798s _1_1_798_798 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19300.19300.3 18.89 18.89 2.857 6 1 1 0 990.465 2889.4185 S798s TMT10 789 (K) ALNVTVDVQsPACTSYQMTPQGHR (A) ALNVT(0.0)VDVQS(0.99)PACT(0.0)S(0.0)Y(0.0)QMT(0.0)PQGHR C:Carbamidomethylation,s:Phosphorylated S INCENP 105826.3 1 21 138.1 524.38 HUMAN 1 6.1732 1.108 NVVLHELSGDDDTDQ-p Q14789-2;S17-p NVVLHELSGDDDTDQ 0.608372277097511 0.288684172775639 0.073 -0.104 3.99588180929603 7.11951998271265 0.073 -0.104 0.398484854102526 0.194110041180906 0.916342335737853 -1.4815024290378 Q14789 GOLGB1 Q14789.2.S17.p_GOLGB1 Q14789-2_S17s _1_1_17_17 Q14789-2 Q14789-2|F8WF12 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32737.32737.4 24.41 24.41 3.257 3 1 1 0 702.8333 2728.3409 S17s TMT10 5 (R) LSGLANVVLHELsGDDDTDQNMR (A) LS(0.0)GLANVVLHELS(0.99)GDDDT(0.0)DQNMR s:Phosphorylated S GOLGB1 378557.2 8 1 93.1 610.98 HUMAN 1 3.9959 -7.1195 NVVQFEPSKGAIGKA-p P41250;S500-p NVVQFEPSKGAIGKA 0.24308570935493 0.0310889125388133 -0.286 0.280333333333333 11.7486458925132 20.3674949835745 -0.286 0.280333333333333 0.0668552336197799 0.00918862444756969 -2.28782912483233 3.954478921255 P41250 GARS P41250.S500.p_GARS P41250_S500s _1_1_500_500 P41250 P41250 Glycine--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20659.20659.3 12.64 12.64 12.64 2 1 1 0 595.9895 1705.9889 S500s TMT10 491 (K) TVNVVQFEPsK (G) T(0.0)VNVVQFEPS(0.99)K K:TMT10,s:Phosphorylated S GARS 83905.8 1 3 2422.1 84.16 HUMAN 1 -11.7486 20.3675 NVYLMKRSPRGLSHS-p Q96KB5-2;S52-p NVYLMKRSPRGLSHS 0.942980702772939 0.0160108255219112 0.0146666666666667 -0.907 0.501464764121808 24.8014038542544 0.0146666666666667 -0.907 0.89095039269151 0.00331024100848369 0.14368262098951 -4.9874930324671 Q96KB5 PBK Q96KB5.2.S52.p_PBK Q96KB5-2_S52s _1_1_52_52 Q96KB5-2 Q96KB5-2 Isoform 2 of Lymphokine-activated killer T-cell-originated protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22613.22613.4 15.75 15.75 5.653 3 1 1 0 609.0862 2353.3579 S52s TMT10 38 (K) LGFGTGVNVYLMKRsPR (G) LGFGT(0.0)GVNVY(0.0)LMKRS(0.99)PR K:TMT10,s:Phosphorylated S PBK 37553.1 6 5 2474.1 81.89 HUMAN 1 0.5015 -24.8014 NVYYNEATGGKYVPR-p P68371;T55-p NVYYNEATGGKYVPR 0.397344397153414 0.0107297167154974 -0.262333333333333 0.821666666666667 7.39835502826039 27.6109191042912 -0.262333333333333 0.821666666666667 0.182039023496134 0.0017334371088918 -1.53057860382169 5.72876966225866 P68371 TUBB4B P68371.T55.p_TUBB4B P68371_T55t _1_1_55_55 P68371 P68371 Tubulin beta-4B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18331.18331.3 17.55 17.55 8.353 4 1 1 0 794.7469 2302.2596 T55t TMT10 47 (R) INVYYNEAtGGKYVPR (A) INVY(0.0)Y(0.0)NEAT(0.99)GGKY(0.0)VPR K:TMT10,t:Phosphorylated T TUBB4B 50286.6 5 22 333.2 357.15 HUMAN 1 -7.3984 27.6109 NWDVQGYS_______-p Q8N4S9;S558-p NWDVQGYS_______ 0.425998757587894 0.551884682712999 -0.117 -0.0616666666666666 6.8270372008113 3.47673956538573 -0.117 -0.0616666666666667 0.207632952658679 0.449082408801335 -1.43070171454391 -0.815560831451005 Q8N4S9 MARVELD2 Q8N4S9.S558.p_MARVELD2 Q8N4S9_S558s _1_1_558_558 Q8N4S9 Q8N4S9|Q8N4S9-3|A1BQX2|A0A0G2JQ38 MARVEL domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26487.26487.2 15.54 15.54 4.956 2 1 1 0 754.3275 1427.6827 S558s TMT10 549 (K) VMNWDVQGYs (-) VMNWDVQGY(0.0)S(0.99) s:Phosphorylated S MARVELD2 64623.4 2 8 1043.1 184.85 HUMAN 1 -6.827 -3.4767 NWGAVVRSPEGTPQK-p Q86WB0;S24-p NWGAVVRSPEGTPQK 0.361546095644314 0.00923055336997163 0.131 -0.443333333333333 8.21152142706535 28.749282432308 0.131 -0.443333333333333 0.150955123322863 0.00133374178286826 1.67183533034958 -6.05136385230443 Q86WB0 ZC3HC1 Q86WB0.S24.p_ZC3HC1 Q86WB0_S24s _1_1_24_24 Q86WB0 Q86WB0|C9J0I9|Q86WB0-3|F8WAU5|F8WF13|F8WDK5|F8WBD7 Nuclear-interacting partner of ALK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14982.14982.3 14.79 14.79 2.262 2 1 1 0 722.0481 2084.1653 S24s TMT10 17 (K) NWGAVVRsPEGTPQK (I) NWGAVVRS(0.99)PEGT(0.0)PQK K:TMT10,s:Phosphorylated S ZC3HC1 56401.6 9 1 624.1 258.98 HUMAN 1 8.2115 -28.7493 NWKNLSDSEKELYIQ-p Q00059;S195-p NWKNLSDSEKELYIQ 0.223663787104468 0.217839095012657 0.273666666666667 0.14 12.4977778626039 8.71019671374203 0.273666666666667 0.14 0.0562629129775382 0.13457993946743 2.42095063541434 1.75758738812936 Q00059 TFAM Q00059.S195.p_TFAM Q00059_S195s _1_1_195_195 Q00059 Q00059|Q00059-2 Transcription factor A, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15404.15404.5 20.5 18.36 1.158 4 1 1 0 635.3289 3092.6467 S195s TMT10 191 (K) NLSDsEKELYIQHAKEDETR (Y) NLS(0.0)DS(0.99)EKELY(0.0)IQHAKEDET(0.0)R K:TMT10,s:Phosphorylated S TFAM 29324.3 6 4 2428.1 83.92 HUMAN 1 12.4978 8.7102 NWKRLLDSPGPPKGE-p O75764;S81-p NWKRLLDSPGPPKGE 0.474992641256242 0.0228536667663428 0.149333333333333 -0.426666666666667 5.95179720483012 22.4016802436214 0.149333333333333 -0.426666666666667 0.253992141343046 0.00575217348216077 1.2759718845103 -4.40961954996042 O75764 TCEA3 O75764.S81.p_TCEA3 O75764_S81s _1_1_81_81 O75764 O75764|O75764-2|S4R419 Transcription elongation factor A protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12386.12386.4 7.77 7.77 99 1 1 1 0 619.8431 2396.3752 S81s TMT10 78 (R) LLDsPGPPKGEKGEER (E) LLDS(1.0)PGPPKGEKGEER K:TMT10,s:Phosphorylated S TCEA3 39712.7 1 1 925.1 199.8 HUMAN 1 5.9518 -22.4017 NWPLLTVSKGFFEGT-p P53621-2;S823-p NWPLLTVSKGFFEGT 0.313090684136909 0.193462396432087 0.172666666666667 0.143333333333333 9.43508967585224 9.37923251632495 0.172666666666667 0.143333333333333 0.113891426461587 0.11536571136857 1.88370993635593 1.87332716701648 P53621 COPA P53621.2.S823.p_COPA P53621-2_S823s _1_1_823_823 P53621-2 P53621-2 Isoform 2 of Coatomer subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37701.37701.4 18.88 18.88 1.942 3 1 1 0 746.4194 2902.688 S823s TMT10 803 (K) LLQPPAPIMPLDTNWPLLTVsK (G) LLQPPAPIMPLDT(0.0)NWPLLT(0.0)VS(0.99)K K:TMT10,s:Phosphorylated S COPA 140918.9 2 8 545.1 275.81 HUMAN 1 9.4351 9.3792 NWSRLSVSTETLESE-p Q96CX6;S24-p NWSRLSVSTETLESE 0.719055536391984 0.878974981770907 0.0496666666666667 0.0213333333333334 2.70277672688534 0.78633898195498 0.0496666666666667 0.0213333333333334 0.536688546781916 0.834384257946414 0.659368157298625 0.219369264946818 Q96CX6 LRRC58 Q96CX6.S24.p_LRRC58 Q96CX6_S24s _1_1_24_24 Q96CX6 Q96CX6 Leucine-rich repeat-containing protein 58 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22464.22464.3 16.98 13.32 1.105 5 1 1 0 815.3983 2364.2092 S24s TMT10 21 (R) LSVsTETLESELEARGEER (R) LS(0.0)VS(0.99)T(0.0)ET(0.0)LES(0.0)ELEARGEER s:Phosphorylated S LRRC58 41269.6 2 1 4090.1 37.83 HUMAN 1 2.7028 0.7863 NWVNRTLSEAGKSTS-p P13797;S533-p NWVNRTLSEAGKSTS 0.419598745385739 0.920923786602269 0.141333333333333 -0.015 6.96186693314766 0.502385100292465 0.141333333333333 -0.015 0.201285878166847 0.890761606733944 1.45433655673628 -0.143919986253025 P13797 PLS3 P13797.S533.p_PLS3 P13797_S533s _1_1_533_533 P13797 P13797|P13797-2 Plastin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10337.10337.2 9.08 1.1 2.6 2 1 1 0 622.3385 1163.7036 S533s TMT10 531 (R) TLsEAGK (S) T(0.0)LS(0.99)EAGK K:TMT10,s:Phosphorylated S PLS3 71323.2 1 5 3150.1 59.17 HUMAN 1 6.9619 -0.5024 NYAESDHSEDEDNDN-p Q9P2R6;S56-p NYAESDHSEDEDNDN 0.941601783060378 0.363033799858537 -0.0153333333333333 0.089 0.513899071261037 5.83420862970241 -0.0153333333333333 0.0890000000000001 0.88840315638682 0.26096312060246 -0.14706724707898 1.25468155886057 Q9P2R6 RERE Q9P2R6.S56.p_RERE Q9P2R6_S53sS56s_2_2_53_56 Q9P2R6 Q9P2R6 Arginine-glutamic acid dipeptide repeats protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8464.8464.4 15.19 15.19 2.538 7 2 2 0 937.6507 3587.6461 S53s S56s TMT10 49 (K) NYAEsDHsEDEDNDNNSATAEESTKK (N) NY(0.0)AES(0.99)DHS(0.99)EDEDNDNNS(0.0)AT(0.0)AEES(0.0)T(0.0)KK K:TMT10,s:Phosphorylated S RERE 173561.6 3 11 278.1 389.04 HUMAN 1 -0.5139 5.8342 NYARGHYTIGKEIID-p P68363;T109-p NYARGHYTIGKEIID 0.193166030157494 0.00292360520383369 -0.74 0.664333333333333 13.938666910483 38.2497357670148 -0.74 0.664333333333334 0.0403769313039913 0.000149632669267392 -2.6816645230435 9.37131568378266 P68363 TUBA1B P68363.T109.p_TUBA1B P68363_T109t _1_1_109_109 P68363 F5H5D3|Q71U36|P68363|Q13748|Q6PEY2|Q9BQE3|P68366 Tubulin alpha-1B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8592.8592.3 9.18 9.18 9.179 2 1 1 0 438.5726 1233.7356 T109t TMT10 106 (R) GHYtIGK (E) GHY(0.0)T(0.99)IGK K:TMT10,t:Phosphorylated T TUBA1B 50835.4 2 6 868.1 210.03 HUMAN 1 -13.9387 38.2497 NYELDEDTD______-p Q9UBW7;T1376-p NYELDEDTD______ 0.995854541000221 0.147648305088662 -0.00100000000000001 -0.19 0.0337916589757138 10.9367271297461 -0.00100000000000001 -0.19 0.99224937517686 0.0805985608160133 -0.0101709180677825 -2.1440678847522 Q9UBW7 ZMYM2 Q9UBW7.T1376.p_ZMYM2 Q9UBW7_T1376t _1_1_1376_1376 Q9UBW7 Q9UBW7 Zinc finger MYM-type protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18496.18496.2 20.33 20.33 20.332 3 1 1 0 1201.0215 2321.0709 T1376t TMT10 1363 (K) DIYDKDNYELDEDtD (-) DIY(0.0)DKDNY(0.0)ELDEDT(0.99)D K:TMT10,t:Phosphorylated T ZMYM2 158502.5 4 10 750.1 232.41 HUMAN 1 -0.0338 -10.9367 NYESAPPSPQYKKII-p O75223;S136-p NYESAPPSPQYKKII 0.495458193368512 0.392692340753538 -0.105333333333333 0.101666666666667 5.61805843979271 5.3956962496497 -0.105333333333333 0.101666666666667 0.274280009616906 0.288689092322246 -1.21621195988273 1.17584871286766 O75223 GGCT O75223.S136.p_GGCT O75223_S136s _1_1_136_136 O75223 O75223|B8ZZK2|M0QZK8 Gamma-glutamylcyclotransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18182.18182.5 16.71 16.71 2.015 7 1 1 0 575.0982 2791.4944 S136s TMT10 124 (R) SYLMTNYESAPPsPQYKK (I) S(0.0)Y(0.0)LMT(0.0)NY(0.0)ES(0.0)APPS(0.99)PQY(0.0)KK K:TMT10,s:Phosphorylated S GGCT 21235.6 5 4 1818.1 112.92 HUMAN 1 -5.6181 5.3957 NYGMDLNSDDSTDDE-p Q9NQS7;S828-p NYGMDLNSDDSTDDE 0.64960931219864 0.68734157032054 0.0766666666666667 -0.0466666666666667 3.51523187900798 2.2291837528834 0.0766666666666667 -0.0466666666666666 0.445119696403754 0.598524075799533 0.823252180921854 -0.558911078534701 Q9NQS7 INCENP Q9NQS7.S828.p_INCENP Q9NQS7_S828s_1_1_828_828 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20127.20127.5 18.71 18.71 1.745 5 1 1 0 816.7855 3998.9343 N827n S828s TMT10 817 (K) INPDNYGMDLnsDDSTDDEAHPRKPIPTWAR (G) IN(0.0)PDN(0.0)Y(0.0)GMDLN(0.99)S(0.99)DDS(0.0)T(0.0)DDEAHPRKPIPT(0.0)WAR K:TMT10,n:Deamidated,s:Phosphorylated S INCENP 105826.3 2 22 138.1 524.38 HUMAN 1 3.5152 -2.2292 NYKEDSESDGSQKSL-p Q96T23;S1223-p NYKEDSESDGSQKSL 0.239911948391928 0.00843795504929371 0.235333333333333 -0.460666666666667 11.8482838665929 29.447584743685 0.235333333333333 -0.460666666666667 0.0653388691005812 0.00113564220855699 2.30545296405895 -6.25611819760325 Q96T23 RSF1 Q96T23.S1223.p_RSF1 Q96T23_S1223s _1_1_1223_1223 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9956.9956.3 16.17 16.17 1.492 4 1 1 0 832.4131 2415.2607 S1223s TMT10 1214 (R) QINYKEDSEsDGSQK (S) QINY(0.0)KEDS(0.0)ES(0.99)DGS(0.0)QK K:TMT10,s:Phosphorylated S RSF1 165358.1 2 15 39.1 857.38 HUMAN 1 11.8483 -29.4476 NYKKRKRSPSPSPTP-p Q8TAQ2;S302-p NYKKRKRSPSPSPTP 0.803215176917681 0.0154596379285256 -0.044 0.380666666666667 1.83259006317187 25.045428128161 -0.044 0.380666666666667 0.655754068372375 0.0031293719623933 -0.471400232044888 5.04897484580538 Q8TAQ2 SMARCC2 Q8TAQ2.S302.p_SMARCC2 Q8TAQ2_S302s _1_1_302_302 Q8TAQ2 F8VXC8|Q8TAQ2|Q8TAQ2-3|Q8TAQ2-2 SWI/SNF complex subunit SMARCC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8677.8677.2 14.89 10.56 4.66 4 1 1 0 818.4235 1555.8732 S302s TMT10 302 (R) sPSPSPTPEAK (K) S(0.99)PS(0.0)PS(0.0)PT(0.0)PEAK K:TMT10,s:Phosphorylated S SMARCC2 133276.4 9 3 499.1 292.05 HUMAN 1 -1.8326 25.0454 NYRGQVVSLIRMRNP-p P07384;S290-p NYRGQVVSLIRMRNP 0.681351208373412 0.346363174839893 -0.061 -0.096 3.12615520083968 6.10320986731211 -0.061 -0.096 0.486838011550799 0.245289531243517 -0.745921406728023 -1.30261387150756 P07384 CAPN1 P07384.S290.p_CAPN1 P07384_S290s _1_1_290_290 P07384 P07384 Calpain-1 catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18797.18797.2 8.01 2.4 99 1 1 1 0 590.8361 1100.6989 S290s TMT10 286 (R) GQVVsLIR (M) GQVVS(1.0)LIR s:Phosphorylated S CAPN1 82516.1 1 4 1866.1 110.2 HUMAN 1 -3.1262 -6.1032 NYSDLDQSNVTEETP-p Q8NC51;S252-p NYSDLDQSNVTEETP 0.81664266999589 0.951152336247639 -0.0326666666666667 -0.00866666666666666 1.68945581540408 0.311406353630816 -0.0326666666666667 -0.00866666666666666 0.677726423535204 0.930806408375848 -0.438876046243473 -0.0909387635736319 Q8NC51 SERBP1 Q8NC51.S252.p_SERBP1 Q8NC51_S252sT255t_2_2_252_255 Q8NC51 Q8NC51|Q8NC51-2 Plasminogen activator inhibitor 1 RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17081.17081.4 22.69 22.69 3.669 8 2 2 0 1099.4871 4233.9737 S252s N253n T255t TMT10 241 (K) QISYNYSDLDQsnVtEETPEGEEHHPVADTENK (E) QIS(0.0)Y(0.0)N(0.0)Y(0.0)S(0.0)DLDQS(0.99)N(0.99)VT(0.99)EET(0.0)PEGEEHHPVADT(0.0)EN(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T SERBP1 45021.6 1 13 616.1 261.14 HUMAN 1 -1.6895 -0.3114 NYSGGYGTPDGLGGY-p P31942;T314-p NYSGGYGTPDGLGGY 0.800641969449871 0.189593461424503 -0.052 -0.206666666666667 1.85982712899622 9.49676923167592 -0.052 -0.206666666666667 0.6516543326581 0.112285344772238 -0.477531016588449 -1.89367556230915 P31942 HNRNPH3 P31942.T314.p_HNRNPH3 P31942_T314t_1_1_314_314 P31942 P31942|P31942-2|P31942-3 Heterogeneous nuclear ribonucleoprotein H3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20876.20876.4 12.71 12.71 1.897 9 1 1 0 1073.7041 4195.8031 T314t M337m TMT10 302 (R) MGMGNNYSGGYGtPDGLGGYGRGGGGSGGYYGQGGmSGGGWR (G) M(0.0)GM(0.0)GNNY(0.0)S(0.0)GGY(0.0)GT(0.99)PDGLGGY(0.0)GRGGGGS(0.0)GGY(0.0)Y(0.0)GQGGM(0.99)S(0.0)GGGWR t:Phosphorylated T,m:Oxidized methionine HNRNPH3 36982.9 3 5 1995.1 103.48 HUMAN 1 -1.8598 -9.4968 NYSQFDHSDSDDDFV-p Q96B01;S19-p NYSQFDHSDSDDDFV 0.193883926313618 0.0195717911533627 -0.222333333333333 -0.380333333333333 13.9055914119431 23.4549069247868 -0.222333333333333 -0.380333333333333 0.0406856125332714 0.00451345698189374 -2.67560123199924 -4.65744771623174 Q96B01 RAD51AP1 Q96B01.S19.p_RAD51AP1 Q96B01_S19sS21s_2_2_19_21 Q96B01 Q96B01|Q96B01-2|Q96B01-3|F5H1Y0|F5H710|F5H031 RAD51-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23025.23091.5 17.22 11.18 3.315 6 2 2 0 755.3601 3612.8425 S19s S21s TMT10 9 (K) KPVNYSQFDHsDsDDDFVSATVPLNK (K) KPVNY(0.0)S(0.0)QFDHS(0.99)DS(0.99)DDDFVS(0.0)AT(0.0)VPLNK K:TMT10,s:Phosphorylated S RAD51AP1 38684.9 6 6 1345.1 151.31 HUMAN 1 -13.9056 -23.4549 NYVSWSDSEDDDEDE-p Q9UPY3;S415-p NYVSWSDSEDDDEDE 0.199704507240093 0.0304177778373826 -0.455 0.42 13.6073936549536 20.5065288878715 -0.455 0.42 0.0435773317229964 0.00889912098700736 -2.6211136565371 3.98466033393172 Q9UPY3 DICER1 Q9UPY3.S415.p_DICER1 Q9UPY3_S413sS415s_2_2_413_415 Q9UPY3 Q9UPY3|Q9UPY3-2 Endoribonuclease Dicer HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21056.21056.3 15.58 15.58 1.416 4 2 2 0 1136.783 3248.3915 S413s S415s TMT10 405 (R) NQDNYVSWsDsEDDDEDEEIEEK (E) NQDNY(0.0)VS(0.0)WS(0.99)DS(0.99)EDDDEDEEIEEK K:TMT10,s:Phosphorylated S DICER1 221416.1 1 11 942.1 197.99 HUMAN 1 -13.6074 20.5065 NYYSSRFSPDSQYID-p Q8TEW0;S383-p NYYSSRFSPDSQYID 0.427005323392086 0.225758121859622 -0.113333333333333 -0.188333333333333 6.80762520823143 8.51348629577081 -0.113333333333333 -0.188333333333333 0.208563102778641 0.140815794682759 -1.4272951997012 -1.72355810059845 Q8TEW0 PARD3 Q8TEW0.S383.p_PARD3 Q8TEW0_S383s _1_1_383_383 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11|Q8TEW0-4|Q8TEW0-6|Q8TEW0-10|Q8TEW0-9|F5GZI3 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13886.13886.3 16.74 12.58 1.455 7 1 1 0 845.7121 2455.1476 S383s TMT10 375 (K) NNYYSSRFsPDSQYIDNR (S) NNY(0.0)Y(0.0)S(0.0)S(0.0)RFS(0.99)PDS(0.0)QY(0.0)IDNR s:Phosphorylated S PARD3 151933.9 1 9 65.1 692.2 HUMAN 1 -6.8076 -8.5135 PAAAEPVTPTSKAGS-p P00519-2;T871-p PAAAEPVTPTSKAGS 0.0506176118125653 0.00203500921985104 -0.458666666666667 -0.985333333333333 28.5832858605068 42.047018283682 -0.458666666666667 -0.985333333333333 0.00138570700991453 6.24163217374929e-05 -6.01240064056126 -11.0915266731553 P00519 ABL1 P00519.2.T871.p_ABL1 P00519-2_T871t _1_1_871_871 P00519-2 P00519-2 Isoform IB of Tyrosine-protein kinase ABL1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14837.14837.3 22.4 22.4 5.041 5 1 1 0 731.7244 2113.1905 T871t TMT10 858 (K) GSALGTPAAAEPVtPTSK (A) GS(0.0)ALGT(0.0)PAAAEPVT(0.99)PT(0.0)S(0.0)K K:TMT10,t:Phosphorylated T ABL1 125637.1 1 13 347.1 352.28 HUMAN 1 -28.5833 -42.047 PAAEPVLSPLEGTKM-p F6VRR5;S292-p PAAEPVLSPLEGTKM 0.126345760440198 0.173427485358535 -0.373 -0.187666666666667 18.6676869424062 10.0042387225087 -0.373 -0.187666666666667 0.0135903707863645 0.0999024474208769 -3.59867544653234 -1.98164513442917 F6VRR5 POLDIP3 F6VRR5.S292.p_POLDIP3 F6VRR5_S292s _1_1_292_292 F6VRR5 F6VRR5|Q9BY77|Q9BY77-2 Polymerase delta-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25953.25953.3 18.12 18.12 7.828 2 1 1 0 730.4009 2109.2207 S292s TMT10 283 (K) ELPAAEPVLsPLEGTK (M) ELPAAEPVLS(0.99)PLEGT(0.0)K K:TMT10,s:Phosphorylated S POLDIP3 48388.1 1 3 2378.1 85.97 HUMAN 1 -18.6677 -10.0042 PAANTGESKVFYYKM-p P62258;S117-p PAANTGESKVFYYKM 1 0.213682722288968 -9.25185853854297e-18 -0.133666666666667 4.82163733276644e-16 8.81821088522999 -1.60246890531964e-17 -0.133666666666667 1 0.131274058280817 -1.69925103607104e-16 -1.77626996756173 P62258 YWHAE P62258.S117.p_YWHAE P62258_S117s _1_1_117_117 P62258 P62258|P62258-2 14-3-3 protein epsilon HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11687.11687.3 13.78 13.78 1.653 2 1 1 0 592.6523 1695.9794 S117s TMT10 107 (K) HLIPAANTGEsK (V) HLIPAANT(0.0)GES(0.99)K K:TMT10,s:Phosphorylated S YWHAE 29344.6 1 11 2349.6 87.09 HUMAN 1 0 -8.8182 PAAPRSRSLGGAVGS-p Q8NHG8;S82-p PAAPRSRSLGGAVGS 0.086569904991124 0.27702704206942 -0.338666666666667 0.115666666666667 22.7612207964801 7.34473723875138 -0.338666666666667 0.115666666666667 0.00529514577069132 0.184300399289265 -4.49820591294703 1.52079175809058 Q8NHG8 ZNRF2 Q8NHG8.S82.p_ZNRF2 Q8NHG8_S82s _1_1_82_82 Q8NHG8 Q8NHG8 E3 ubiquitin-protein ligase ZNRF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11201.11201.2 19.15 19.15 10.903 3 1 1 0 634.8038 1188.6331 S82s Hydrogen 82 (R) sLGGAVGSVASGAR (A) S(0.99)LGGAVGS(0.0)VAS(0.0)GAR s:Phosphorylated S ZNRF2 24627.8 3 2 1463.1 140.17 HUMAN 1 -22.7612 7.3447 PAAQASVSNGEDAGG-p O14562;S72-p PAAQASVSNGEDAGG 0.323049007555811 0.348618349036474 0.150666666666667 0.152 9.18673368426542 6.06712018854763 0.150666666666667 0.152 0.120594258517742 0.247336369152849 1.84069230021852 1.29620008399737 O14562 UBFD1 O14562.S72.p_UBFD1 O14562_S72s_1_1_72_72 O14562 O14562|H3BRL3|H3BUM8 Ubiquitin domain-containing protein UBFD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21422.21630.5 27.32 27.32 1.208 3 1 1 0 825.6118 4043.0834 S72s N73n TMT10 52 (R) GSLQPAPAQPPGDPAAQASVsnGEDAGGGAGRELVDLK (I) GS(0.0)LQPAPAQPPGDPAAQAS(0.0)VS(0.99)N(1.0)GEDAGGGAGRELVDLK K:TMT10,s:Phosphorylated S,n:Deamidated UBFD1 33495.5 4 1 3260.1 55.68 HUMAN 1 9.1867 6.0671 PAAQKSPSDLLDASA-p O60499;S134-p PAAQKSPSDLLDASA 0.842780474100948 0.0403455591727108 0.032 -0.262333333333333 1.43724292620713 18.6956367533847 0.032 -0.262333333333333 0.718250120258885 0.0135031883244907 0.380225082087478 -3.6013496837981 O60499 STX10 O60499.S134.p_STX10 O60499_S134s _1_1_134_134 O60499 O60499|Q5U8S2 Syntaxin-10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21426.21426.3 19.17 19.17 1.223 6 1 1 0 629.3088 1805.9442 S134s TMT10 132 (K) SPsDLLDASAVSATSR (Y) S(0.0)PS(0.99)DLLDAS(0.0)AVS(0.0)AT(0.0)S(0.0)R s:Phosphorylated S STX10 28227.7 3 2 3006.1 63.44 HUMAN 1 1.4372 -18.6956 PAAQRATSVDYSSFA-p Q86YS7-3;S864-p PAAQRATSVDYSSFA 0.779932804642795 0.00911063922551688 0.0476666666666667 0.43 2.07472040745151 28.8625274078495 0.0476666666666667 0.43 0.62019456960402 0.00129941315515739 0.525286552497089 6.08420708844094 Q86YS7 C2CD5 Q86YS7.3.S864.p_C2CD5 Q86YS7-3_S864s _1_1_864_864 Q86YS7-3 Q86YS7-4|Q86YS7-3|Q86YS7-2 Isoform 3 of C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15225.15225.2 12.66 12.66 1.116 5 1 1 0 814.3636 1547.7539 S864s TMT10 862 (R) ATsVDYSSFADR (C) AT(0.0)S(0.99)VDY(0.0)S(0.0)S(0.0)FADR s:Phosphorylated S C2CD5 117622.7 1 15 349.1 351.16 HUMAN 1 2.0747 28.8625 PAARGLLTPPASPLE-p Q9Y5W3;T244-p PAARGLLTPPASPLE 0.59955563859167 0.522504761726917 -0.076 -0.0703333333333333 4.10392970278893 3.78733918468007 -0.076 -0.0703333333333334 0.388693277682183 0.418086439457465 -0.936944438588068 -0.876111912729699 Q9Y5W3 KLF2 Q9Y5W3.T244.p_KLF2 Q9Y5W3_T244tS248s_2_2_244_248 Q9Y5W3 Q9Y5W3 Krueppel-like factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.35755.35755.4 12.54 12.54 99 2 2 2 0 681.1345 2561.5885 T244t S248s TMT10 241 (R) GLLtPPAsPLELLEAKPK (R) GLLT(1.0)PPAS(1.0)PLELLEAKPK K:TMT10,t:Phosphorylated T,s:Phosphorylated S KLF2 37932.4 2 1 6292.1 12.54 HUMAN 1 -4.1039 -3.7873 PAARPPASPSPQRQA-p P17600;S551-p PAARPPASPSPQRQA 0.627993569436905 0.0344052898225862 0.079 0.289333333333333 3.75299416175516 19.7189591341919 0.079 0.289333333333333 0.421405872889161 0.0106685178104827 0.869609604290456 3.81538753798271 P17600 SYN1 P17600.S551.p_SYN1 P17600_S551sS553s_2_2_551_553 P17600 P17600|P17600-2 Synapsin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7083.7083.4 9.8 9.8 1.851 4 2 2 0 926.2137 3541.905 S551s S553s TMT10 532 (R) QSRPVAGGPGAPPAARPPAsPsPQRQAGPPQATR (Q) QS(0.0)RPVAGGPGAPPAARPPAS(0.99)PS(0.99)PQRQAGPPQAT(0.0)R s:Phosphorylated S SYN1 74281.2 3 6 2174.1 94.5 HUMAN 1 3.753 19.719 PAARTPQSPAPCVLL-p Q9Y613;S498-p PAARTPQSPAPCVLL 0.612359630302695 0.0933994701423047 -0.0706666666666667 -0.213333333333333 3.94796557467987 13.6175529651019 -0.0706666666666667 -0.213333333333333 0.402905728792702 0.0434755118207864 -0.907170044045674 -2.62144409612697 Q9Y613 FHOD1 Q9Y613.S498.p_FHOD1 Q9Y613_S498s _1_1_498_498 Q9Y613 Q9Y613 FH1/FH2 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18134.18134.3 10.83 10.83 2.531 2 1 1 0 549.9545 1567.8828 S498s TMT10 495 (R) TPQsPAPCVLLR (A) T(0.0)PQS(0.99)PAPCVLLR C:Carbamidomethylation,s:Phosphorylated S FHOD1 127404.8 2 5 730.1 236 HUMAN 1 -3.948 -13.6176 PAATSPLSPMANGGR-p Q86UU1;S223-p PAATSPLSPMANGGR 0.550883290708892 0.150277269319722 -0.0806666666666667 -0.342333333333333 4.77883356163165 10.8307558365169 -0.0806666666666667 -0.342333333333333 0.332748911781387 0.0825894200267535 -1.06336783255156 -2.12554353611388 Q86UU1 PHLDB1 Q86UU1.S223.p_PHLDB1 Q86UU1_S220sS223s_2_2_220_223 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3|A0A087WXY7 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14226.14226.3 7.91 7.91 1.16 3 2 2 0 725.0262 2013.1316 S220s S223s TMT10 215 (K) KPAATsPLsPMANGGR (Y) KPAAT(0.0)S(0.99)PLS(0.99)PMANGGR K:TMT10,s:Phosphorylated S PHLDB1 152129.1 1 26 99.1 600.41 HUMAN 1 -4.7788 -10.8308 PAAVDEGSISPRTLS-p R4GMW8;S836-p PAAVDEGSISPRTLS 0.247048592039774 0.296648477995653 0.227333333333333 0.123666666666667 11.5986342488532 6.96679142499744 0.227333333333333 0.123666666666667 0.0692048569245904 0.20105776822328 2.2613390386947 1.45479894996743 R4GMW8 NotFound R4GMW8.S836.p_NotFound R4GMW8_S836sS838s_2_2_836_838 R4GMW8 R4GMW8|A0A1W2PS85|P28715 BIVM-ERCC5 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11874.11874.3 12.13 12.13 99 2 2 2 0 591.6001 1612.8492 S836s S838s TMT10 827 (R) NAPAAVDEGsIsPR (T) NAPAAVDEGS(1.0)IS(1.0)PR s:Phosphorylated S BIVM-ERCC5 185876.1 1 16 561.1 271.77 HUMAN 1 11.5986 6.9668 PAAVGRRSPVSTRPL-p Q8ND56-2;S216-p PAAVGRRSPVSTRPL 0.783922702556373 0.934634568968327 0.0426666666666667 0.0133333333333334 2.03441698705477 0.414537287713434 0.0426666666666667 0.0133333333333334 0.62597689173006 0.908963137967491 0.516410509414779 0.11978987197184 Q8ND56 LSM14A Q8ND56.2.S216.p_LSM14A Q8ND56-2_S216s _1_1_216_216 Q8ND56-2 Q8ND56|Q8ND56-2|Q8ND56-3 Isoform 2 of Protein LSM14 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7398.7604.3 18.1 18.1 5.126 5 1 1 0 588.6479 1683.9591 S216s Hydrogen 216 (R) sPVSTRPLPSASQK (A) S(0.99)PVS(0.0)T(0.0)RPLPS(0.0)AS(0.0)QK K:TMT10-Lys-Only,s:Phosphorylated S LSM14A 50781.2 41 4 646.1 254.77 HUMAN 1 2.0344 0.4145 PADAPMDSGAEEEKA-p Q8TEK3;S374-p PADAPMDSGAEEEKA 0.859818371436521 0.0255905056852675 -0.0256666666666667 -0.306666666666667 1.28111114814983 21.6579879997954 -0.0256666666666667 -0.306666666666667 0.744541457622919 0.00682654881362374 -0.342978118550491 -4.23976120979746 Q8TEK3 DOT1L Q8TEK3.S374.p_DOT1L Q8TEK3_S374s _1_1_374_374 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15923.15923.4 19.59 19.59 9.692 2 1 1 0 760.6392 2959.565 S374s TMT10 364 (K) VAGPADAPMDsGAEEEKAGAATVK (K) VAGPADAPMDS(0.99)GAEEEKAGAAT(0.0)VK K:TMT10,s:Phosphorylated S DOT1L 185648.6 8 3 132.1 534.85 HUMAN 1 -1.2811 -21.658 PADEANSSPPLPGAL-p A0A1B0GTU4;S170-p PADEANSSPPLPGAL 0.560423836734948 0.359454942145737 0.077 -0.0896666666666666 4.63634779590049 5.89562791405025 0.077 -0.0896666666666666 0.343846984840249 0.257298472883044 1.03697451346743 -1.26565198672314 A0A1B0GTU4 NotFound A0A1B0GTU4.S170.p_NotFound A0A1B0GTU4_S169sS170s_2_2_169_170 A0A1B0GTU4 P49023-2|P49023-4|A0A1B0GTU4|A0A1B0GU60|P49023-3|F5GZ78 Paxillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.35779.35779.5 13.69 13.69 0 6 2 2 0 1014.1036 4904.5672 N158n N168n S169s S170s Hydrogen 148 (R) LLLELNAVQHnPPGFPADEAnssPPLPGALSPLYGVPETNSPLGGK (A) LLLELN(0.33)AVQHN(0.33)PPGFPADEAN(0.33)S(0.99)S(0.99)PPLPGALS(0.0)PLY(0.0)GVPET(0.0)N(0.0)S(0.0)PLGGK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S PXN 117843.4 7 21 288.1 382.57 HUMAN 1 4.6363 -5.8956 PADHHGPSDEEQGSP-p Q92766;S1219-p PADHHGPSDEEQGSP 0.996421434325015 0.370770815212393 0.000666666666666658 0.088 0.0293043122178999 5.71505425407462 0.000666666666666651 0.088 0.993275146468386 0.26822210998531 0.00882478387107707 1.23335140823223 Q92766 RREB1 Q92766.S1219.p_RREB1 Q92766_S1219s _1_1_1219_1219 Q92766 Q92766-2|Q92766-3|Q92766-5|A0A087X055 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20912.20912.4 25.07 24.15 2.389 5 1 1 0 1147.7675 4508.0802 S1219s TMT10 1193 (K) FSPFLQTAEDNTQDEVAGAPADHHGPsDEEQGSPPEDK (L) FS(0.0)PFLQT(0.0)AEDNT(0.0)QDEVAGAPADHHGPS(0.99)DEEQGS(0.0)PPEDK K:TMT10,s:Phosphorylated S RREB1 184269.8 2 22 179.1 480.48 HUMAN 1 0.0293 5.7151 PADPVVRSPKSQGPA-p Q13444;S806-p PADPVVRSPKSQGPA 0.977130047691108 0.0276346695899257 0.00499999999999999 -0.323 0.198599420522808 21.1308761535402 0.00499999999999999 -0.323 0.955300616349124 0.00770747961291462 0.0586963951034502 -4.12182372526525 Q13444 ADAM15 Q13444.S806.p_ADAM15 Q13444_S806s _1_1_806_806 Q13444 Q13444|Q13444-3|Q13444-6 Disintegrin and metalloproteinase domain-containing protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14200.14200.5 16.53 10.97 16.526 2 1 1 0 706.5977 3448.9905 S806s TMT10 782 (K) RLQAELADRPNPPTRPLPADPVVRsPK (S) RLQAELADRPNPPT(0.0)RPLPADPVVRS(0.99)PK K:TMT10,s:Phosphorylated S ADAM15 95696.2 4 1 3519.1 49.23 HUMAN 1 0.1986 -21.1309 PAEGSAGSPGSPTCC-p A4D1S0;S212-p PAEGSAGSPGSPTCC 0.178115895866256 0.20554513896005 0.405333333333333 0.304 14.8026577250745 9.04088188328285 0.405333333333333 0.304 0.0330928543210234 0.124713024485235 2.8415207578199 1.81478401812602 A4D1S0 KLRG2 A4D1S0.S212.p_KLRG2 A4D1S0_S212s _1_1_212_212 A4D1S0 A4D1S0 Killer cell lectin-like receptor subfamily G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5718.5718.3 19.69 19.69 3.314 5 1 1 0 686.6249 1977.8956 S212s TMT10 203 (R) ASPAEGSAGsPGSPTCCR (C) AS(0.0)PAEGS(0.0)AGS(0.99)PGS(0.0)PT(0.0)CCR C:Carbamidomethylation,s:Phosphorylated S KLRG2 43534.4 1 12 945.1 197.69 HUMAN 1 14.8027 9.0409 PAEHGVLSRQLRALP-p O43889;S287-p PAEHGVLSRQLRALP 0.608081478632811 0.775547519863685 -0.103333333333333 -0.029 4.00099417129042 1.52690712687871 -0.103333333333333 -0.029 0.398016047723623 0.703573198448061 -0.917319643468043 -0.401239200504405 O43889 CREB3 O43889.S287.p_CREB3 O43889_S287s _1_1_287_287 O43889 O43889|O43889-2|O43889-3 Cyclic AMP-responsive element-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3531.3531.3 7.93 7.03 7.927 2 1 1 0 511.2686 1451.8168 S287s TMT10 277 (R) GSLPAEHGVLsR (Q) GS(0.0)LPAEHGVLS(0.99)R s:Phosphorylated S CREB3 44429.9 2 1 7061.1 7.93 HUMAN 1 -4.001 -1.5269 PAELLEASPAARSLQ-p Q9H6W3;S109-p PAELLEASPAARSLQ 0.681222809414458 0.040078337686064 0.0823333333333333 -0.252333333333333 3.1285999625181 18.7335989486152 0.0823333333333333 -0.252333333333333 0.486564034323852 0.0133856697257098 0.74641352781753 -3.60917568085775 Q9H6W3 C14orf169 Q9H6W3.S109.p_C14orf169 Q9H6W3_S109s _1_1_109_109 Q9H6W3 Q9H6W3 Ribosomal oxygenase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20516.20516.4 24.86 24.86 24.861 2 1 1 0 572.5381 2207.1658 S109s TMT10 95 (R) EPYGHLGPAELLEAsPAAR (S) EPY(0.0)GHLGPAELLEAS(0.99)PAAR s:Phosphorylated S RIOX1 71426.7 4 1 3665.1 45.74 HUMAN 1 3.1286 -18.7336 PAEPHSPSPTASPLP-p Q9HA65;S604-p PAEPHSPSPTASPLP 0.798947574257861 0.0524315645927934 0.0463333333333333 0.270333333333333 1.87875852412007 17.0806003596005 0.0463333333333333 0.270333333333333 0.648819878941908 0.019585739056345 0.481781634241707 3.2760155258974 Q9HA65 TBC1D17 Q9HA65.S604.p_TBC1D17 Q9HA65_S602sS604s_2_2_602_604 Q9HA65 Q9HA65|Q9HA65-2 TBC1 domain family member 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.34084.34485.4 27.26 27.26 1.47 7 2 2 0 1153.075 4449.3438 S602s S604s TMT10 577 (R) QLTACPELPHNVQEILGLAPPAEPHsPsPTASPLPLSPTR (A) QLT(0.0)ACPELPHNVQEILGLAPPAEPHS(0.99)PS(0.99)PT(0.0)AS(0.0)PLPLS(0.0)PT(0.0)R C:Carbamidomethylation,s:Phosphorylated S TBC1D17 73411.6 6 5 3440.1 50.97 HUMAN 1 1.8788 17.0806 PAEQVPRSPVIKISY-p Q6NUJ5;S250-p PAEQVPRSPVIKISY 0.289757506488831 0.00488731018917169 -0.161333333333333 -0.824666666666667 10.1424060037295 33.738113042575 -0.161333333333333 -0.824666666666667 0.0967741576150664 0.000422852298609511 -2.00646247092712 -7.6410213778327 Q6NUJ5 PWWP2B Q6NUJ5.S250.p_PWWP2B Q6NUJ5_S250s _1_1_250_250 Q6NUJ5 Q6NUJ5|Q6NUJ5-2 PWWP domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8481.8481.5 15.82 11.85 99 1 1 1 0 523.8876 2535.4407 S250s TMT10 237 (R) REEDRAPAEQVPRsPVIK (I) REEDRAPAEQVPRS(1.0)PVIK K:TMT10,s:Phosphorylated S PWWP2B 64650.6 4 5 2283.1 89.78 HUMAN 1 -10.1424 -33.7381 PAERPLPSPGSGEGA-p O75147;S120-p PAERPLPSPGSGEGA 0.476862386005606 0.956871191023952 0.104333333333333 -0.0073333333333333 5.91790513151745 0.274305167379371 0.104333333333333 -0.00733333333333332 0.255982034740883 0.938792223080015 1.26992524206287 -0.0804147061484285 O75147 OBSL1 O75147.S120.p_OBSL1 O75147_S120s _1_1_120_120 O75147 O75147|A6NN50|O75147-4|O75147-1|O75147-2 Obscurin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32009.32009.5 19.04 19.04 1.177 6 1 1 0 1007.6946 4954.5424 S120s TMT10 88 (R) NAAGEAYAAAAVTVLEPPASDPELQPAERPLPsPGSGEGAPVFLTGPR (S) NAAGEAY(0.0)AAAAVT(0.0)VLEPPAS(0.0)DPELQPAERPLPS(0.99)PGS(0.0)GEGAPVFLT(0.0)GPR s:Phosphorylated S OBSL1 210023.9 1 2 4483.1 30.85 HUMAN 1 5.9179 -0.2743 PAETEATTD______-p Q12792-3;T356-p PAETEATTD______ 0.72684073531514 0.410617331567664 -0.062 0.08 2.62873450013227 5.14263312275531 -0.062 0.0800000000000001 0.545916913799862 0.306010753123908 -0.643939810835145 1.12989933877893 Q12792 TWF1 Q12792.3.T356.p_TWF1 Q12792-3_T356t _1_1_356_356 Q12792-3 Q12792-3|Q12792-4 Isoform 3 of Twinfilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13374.13374.2 12.46 12.46 1.606 3 1 1 0 841.9137 1602.8536 T356t TMT10 345 (R) LIRGPAETEATtD (-) LIRGPAET(0.0)EAT(0.0)T(0.99)D t:Phosphorylated T TWF1 41188.9 2 3 2118.1 96.9 HUMAN 1 -2.6287 5.1426 PAEVTHFSPKSIPDY-p Q6PID6;S197-p PAEVTHFSPKSIPDY 0.863531937888239 0.757780713507401 0.0256666666666667 0.0346666666666667 1.24215853917284 1.6631637290941 0.0256666666666667 0.0346666666666667 0.751249413716657 0.681841808096197 0.333564883836213 0.432796718276811 Q6PID6 TTC33 Q6PID6.S197.p_TTC33 Q6PID6_S197s _1_1_197_197 Q6PID6 Q6PID6 Tetratricopeptide repeat protein 33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12265.12265.3 21.33 21.33 2.547 3 1 1 0 765.7489 2215.269 S197s TMT10 186 (K) KSEAPAEVTHFsPK (S) KS(0.0)EAPAEVT(0.0)HFS(0.99)PK K:TMT10,s:Phosphorylated S TTC33 29524.9 6 1 2783.1 70.82 HUMAN 1 1.2422 1.6632 PAFLRQESFTKEPAS-p J3KQR7;S869-p PAFLRQESFTKEPAS 0.220753787202438 0.159651358035814 -0.348 0.236 12.6304431671825 10.4787318810383 -0.348 0.236 0.0545702173155103 0.0895626245920669 -2.44468309874564 2.06413917849123 J3KQR7 NotFound J3KQR7.S869.p_NotFound J3KQR7_S869s _1_1_869_869 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19331.19331.3 12.81 12.81 1.293 3 1 1 0 795.0576 2303.1869 S869s Hydrogen 854 (R) SPEPDGPAPAFLRQEsFTK (E) S(0.0)PEPDGPAPAFLRQES(0.99)FT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S CEP170B 172326.6 3 20 51.1 746.11 HUMAN 1 -12.6304 10.4787 PAFLVTRSMEDFVTW-p Q9NV31;S153-p PAFLVTRSMEDFVTW 0.373737854391693 0.00366823110692036 -0.344666666666667 0.587666666666667 7.91649081050558 36.1624974145978 -0.344666666666667 0.587666666666667 0.161566351917248 0.000241963723187347 -1.62067058388223 8.53217695848222 Q9NV31 IMP3 Q9NV31.S153.p_IMP3 Q9NV31_S153s_1_1_153_153 Q9NV31 Q9NV31 U3 small nucleolar ribonucleoprotein protein IMP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26055.26055.3 7.8 0.93 4.823 4 1 1 0 695.6581 1989.004 S153s M154m TMT10 153 (R) smEDFVTWVDSSK (I) S(0.99)M(1.0)EDFVT(0.0)WVDS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S,m:Oxidized methionine IMP3 21963.9 1 1 7086.1 7.8 HUMAN 1 -7.9165 36.1625 PAFTSRLSGNRGVQY-p Q7Z6Z7;S3135-p PAFTSRLSGNRGVQY 0.597596307544804 0.22795118548977 -0.098 -0.162333333333333 4.13140368500483 8.45905967466122 -0.0980000000000001 -0.162333333333333 0.386242119401136 0.142591629659858 -0.942165651456329 -1.71414064026111 Q7Z6Z7 HUWE1 Q7Z6Z7.S3135.p_HUWE1 Q7Z6Z7_S3135s _1_1_3135_3135 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8994.8994.3 12.65 12.65 2.243 4 1 1 0 534.6052 1521.8335 S3135s TMT10 3127 (R) SPAFTSRLsGNR (G) S(0.0)PAFT(0.0)S(0.0)RLS(0.99)GNR s:Phosphorylated S HUWE1 485818.9 1 51 11.1 1210.45 HUMAN 1 -4.1314 -8.4591 PAFYRLCSSSDTLVS-p Q5T0W9;S802-p PAFYRLCSSSDTLVS 0.935222845456678 0.0734114957947127 -0.0126666666666667 -0.219666666666667 0.569594336188023 15.0619804407083 -0.0126666666666667 -0.219666666666667 0.877082743462992 0.03117467653118 -0.162133914906712 -2.88818953481756 Q5T0W9 FAM83B Q5T0W9.S802.p_FAM83B Q5T0W9_S802sS803s_2_2_802_803 Q5T0W9 Q5T0W9 Protein FAM83B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17694.17694.3 10.33 10.33 1.147 5 2 2 0 985.8079 2795.47 S802s S803s TMT10 800 (R) LCssSDTLVSEGEENQKPK (K) LCS(0.99)S(0.99)S(0.0)DT(0.0)LVS(0.0)EGEENQKPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM83B 115253.5 4 23 249.1 407.75 HUMAN 1 -0.5696 -15.062 PAGAGSPSPPEDRNT-p Q08174-2;S1173-p PAGAGSPSPPEDRNT 0.585348442250855 0.0495585182982508 0.0873333333333333 0.239666666666667 4.27806188903609 17.4534999261822 0.0873333333333333 0.239666666666667 0.373416764025347 0.0179742181101692 0.969922042580248 3.34985809179356 Q08174 PCDH1 Q08174.2.S1173.p_PCDH1 Q08174-2_S1173s _1_1_1173_1173 Q08174-2 Q08174-2 Isoform 2 of Protocadherin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18454.18454.3 17.72 15.28 1.71 5 1 1 0 1042.1588 3044.4911 S1173s TMT10 1152 (K) LSTFVPYQDRGGQEPAGAGSPsPPEDR (N) LS(0.0)T(0.0)FVPY(0.0)QDRGGQEPAGAGS(0.0)PS(0.99)PPEDR s:Phosphorylated S PCDH1 134290.1 5 10 666.1 249.91 HUMAN 1 4.2781 17.4535 PAGDGLLTPDAQKGG-p O60271;T217-p PAGDGLLTPDAQKGG 0.275593372930551 0.424037546319303 -0.166333333333333 -0.0766666666666666 10.5902236563133 4.96041699643608 -0.166333333333333 -0.0766666666666666 0.0872926412594605 0.319123142799286 -2.0844655239715 -1.09657913685242 O60271 SPAG9 O60271.T217.p_SPAG9 O60271_T217t _1_1_217_217 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-9|O60271-3|O60271-5 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.32709.32709.4 24.05 21.44 24.052 2 1 1 0 761.6736 2963.697 T217t TMT10 199 (K) ERPISLGIFPLPAGDGLLtPDAQK (G) ERPIS(0.0)LGIFPLPAGDGLLT(0.99)PDAQK K:TMT10,t:Phosphorylated T SPAG9 147001.6 10 15 84.1 629.25 HUMAN 1 -10.5902 -4.9604 PAGDISVTPPAPAAL-p Q8NI35;T335-p PAGDISVTPPAPAAL 0.506520727045966 0.251309449844667 -0.0926666666666667 -0.118666666666667 5.45119794670765 7.89855428626413 -0.0926666666666667 -0.118666666666667 0.285023195842344 0.162235006816961 -1.18613758800173 -1.61705172585065 Q8NI35 INADL Q8NI35.T335.p_INADL Q8NI35_T335t _1_1_335_335 Q8NI35 Q8NI35|Q8NI35-2|Q8NI35-3|Q8NI35-4|A0A087WUZ6|A0A0X1KG69|A0A0U1RR46 InaD-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32255.32255.4 23.18 23.18 2.268 4 1 1 0 891.7488 3484.0013 T335t TMT10 322 (R) MLVARDPAGDISVtPPAPAALPVALPTVASK (G) MLVARDPAGDIS(0.0)VT(0.99)PPAPAALPVALPT(0.0)VAS(0.0)K K:TMT10,t:Phosphorylated T PATJ 197163.3 14 5 127.1 542.92 HUMAN 1 -5.4512 -7.8986 PAGEAGASPPVRRVR-p Q13425;S110-p PAGEAGASPPVRRVR 0.341848649788872 0.0865230698455862 0.146 0.189 8.66400798159715 14.0725210192397 0.146 0.189 0.136018882305665 0.0391514542369497 1.75020177843766 2.70461057225243 Q13425 SNTB2 Q13425.S110.p_SNTB2 Q13425_S110s _1_1_110_110 Q13425 Q13425|Q13425-2 Beta-2-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15344.15344.5 18.24 18.24 1.524 2 1 1 0 520.4743 2518.3728 S110s TMT10 90 (R) GLGPPSPPAPPRGPAGEAGAsPPVR (R) GLGPPS(0.0)PPAPPRGPAGEAGAS(0.99)PPVR s:Phosphorylated S SNTB2 58405 22 4 637.1 255.93 HUMAN 1 8.664 14.0725 PAGFRAVSPAVPFSR-p I3L2J0;S768-p PAGFRAVSPAVPFSR 0.246507338444546 0.387840359752957 0.240333333333333 0.0926666666666667 11.6333923770719 5.46757076799454 0.240333333333333 0.0926666666666667 0.0686531964135046 0.283950686629205 2.26747227908457 1.18883504351428 I3L2J0 NotFound I3L2J0.S768.p_NotFound I3L2J0_S768s _1_1_768_768 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16749.16986.2 14.22 14.22 2.81 2 1 1 0 670.3528 1259.7309 S768s TMT10 766 (R) AVsPAVPFSR (S) AVS(0.99)PAVPFS(0.0)R s:Phosphorylated S CIC 259056.7 5 16 23.1 999.57 HUMAN 1 11.6334 5.4676 PAGGGNVSAKPGAPP-p Q6ZSJ8;S82-p PAGGGNVSAKPGAPP 0.278859043149947 0.816507421468261 0.211666666666667 0.0233333333333334 10.4860886899878 1.23218370382495 0.211666666666667 0.0233333333333334 0.0894110368130425 0.752976859428013 2.06630194466715 0.331112630734503 Q6ZSJ8 C1orf122 Q6ZSJ8.S82.p_C1orf122 Q6ZSJ8_S82s _1_1_82_82 Q6ZSJ8 Q6ZSJ8|Q6ZSJ8-2 Uncharacterized protein C1orf122 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7078.7078.4 9.57 9.57 9.571 2 1 1 0 766.4138 2982.675 S82s TMT10 71 (R) RRPEPAGGGNVsAKPGAPPQPAVSAR (G) RRPEPAGGGNVS(0.99)AKPGAPPQPAVS(0.0)AR K:TMT10,s:Phosphorylated S C1orf122 11527.6 1 1 6200.1 13.22 HUMAN 1 10.4861 1.2322 PAGPASDTEEEEPGP-p Q8WXE0;T929-p PAGPASDTEEEEPGP 0.283283360364086 0.0368850339996155 0.151 0.340666666666667 10.3465592642246 19.2743896046537 0.151 0.340666666666667 0.0923302631999015 0.011818464078751 2.04198924928718 3.7216056246538 Q8WXE0 CASKIN2 Q8WXE0.T929.p_CASKIN2 Q8WXE0_S927sT929t_2_2_927_929 Q8WXE0 Q8WXE0|Q8WXE0-2 Caskin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19023.19023.4 8.55 8.55 1.529 7 2 2 0 1020.9631 3920.8511 S927s T929t TMT10 906 (R) TLSEPAGPSEPPGPPAPAGPAsDtEEEEPGPEGTPPSR (G) T(0.0)LS(0.0)EPAGPS(0.0)EPPGPPAPAGPAS(0.99)DT(0.99)EEEEPGPEGT(0.0)PPS(0.0)R s:Phosphorylated S,t:Phosphorylated T CASKIN2 127351.5 1 16 984.1 192.08 HUMAN 1 10.3466 19.2744 PAGPELQTPPGKDGA-p Q9Y2U8;T209-p PAGPELQTPPGKDGA 0.127580448450417 0.131278292448008 -0.407666666666667 -0.229333333333333 18.5429730428932 11.6248255432152 -0.407666666666667 -0.229333333333333 0.0139862953715626 0.0687887544305991 -3.57299829685549 -2.26487161260171 Q9Y2U8 LEMD3 Q9Y2U8.T209.p_LEMD3 Q9Y2U8_T209t _1_1_209_209 Q9Y2U8 Q9Y2U8 Inner nuclear membrane protein Man1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10062.10062.3 14.63 11.38 99 1 1 1 0 629.3481 1806.0638 T209t TMT10 201 (R) RPAGPELQtPPGK (D) RPAGPELQT(1.0)PPGK K:TMT10,t:Phosphorylated T LEMD3 100851.5 2 7 412.1 321.94 HUMAN 1 -18.543 -11.6248 PAGPEPASEPGSPYP-p Q5VTI5;S267-p PAGPEPASEPGSPYP 0.127401091135067 0.0500816194069798 0.285 0.238 18.5648746002304 17.3820632736536 0.285 0.238 0.0139159397565559 0.0182723191702107 3.57750089979847 3.33565494499171 Q5VTI5 NotFound Q5VTI5.S267.p_NotFound Q5VTI5_S267s _1_1_267_267 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16606.16606.4 23.59 23.59 5.727 3 1 1 0 639.805 2476.2306 S267s TMT10 256 (K) ANGLPAGPEPAsEPGSPYPEGPR (V) ANGLPAGPEPAS(0.99)EPGS(0.0)PY(0.0)PEGPR s:Phosphorylated S PLEKHA6 119745.7 4 7 52.1 743.36 HUMAN 1 18.5649 17.3821 PAGSPELSPPQPLFR-p Q9UPS6;S1663-p PAGSPELSPPQPLFR 0.177143878244816 0.783359139464399 0.249 0.0276666666666667 14.9009818594106 1.46826721008778 0.249 0.0276666666666667 0.0323520506664655 0.713137507835687 2.85990078593185 0.387496587910829 Q9UPS6 SETD1B Q9UPS6.S1663.p_SETD1B Q9UPS6_S1659sS1663s_2_2_1659_1663 Q9UPS6 Q9UPS6|Q9UPS6-2|A0A0A0MQV9 Histone-lysine N-methyltransferase SETD1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18780.18983.5 17.14 15.14 99 2 2 2 0 688.5636 3278.8526 S1659s S1663s TMT10 1648 (K) KRHEDLVPPAGsPELsPPQPLFRPR (S) KRHEDLVPPAGS(1.0)PELS(1.0)PPQPLFRPR K:TMT10,s:Phosphorylated S SETD1B 213997.2 12 26 570.1 269.37 HUMAN 1 14.901 1.4683 PAGSPPASPGPQGPS-p A0A0A0MRX4;S573-p PAGSPPASPGPQGPS 0.3851629764389 0.0320619890330899 -0.136666666666667 -0.430666666666667 7.67080530173522 20.1719495285374 -0.136666666666667 -0.430666666666667 0.170969826048987 0.00961180711797032 -1.57799653022759 -3.91224904918974 A0A0A0MRX4 RGL3 A0A0A0MRX4.S573.p_RGL3 A0A0A0MRX4_S569sS573s_2_2_569_573 A0A0A0MRX4 Q3MIN7-2|A0A0A0MRX4 Ral guanine nucleotide dissociation stimulator-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.34275.34275.5 19.64 19.64 6.348 7 2 2 0 867.2466 4172.2705 S569s S573s Hydrogen 564 (R) DAPAGsPPAsPGPQGPSTKLPLSLDLPSPRPFALPLGSPR (I) DAPAGS(0.99)PPAS(0.99)PGPQGPS(0.0)T(0.0)KLPLS(0.0)LDLPS(0.0)PRPFALPLGS(0.0)PR K:TMT10-Lys-Only,s:Phosphorylated S RGL3 78574.5 5 8 1395.1 146.85 HUMAN 1 -7.6708 -20.1719 PAGTPSPSGEADGDC-p Q8WVT3;S111-p PAGTPSPSGEADGDC 0.195954837597201 0.0408431144222722 0.272666666666667 0.319666666666667 13.7959782422296 18.6161464517801 0.272666666666667 0.319666666666667 0.041725560164031 0.0137526172038206 2.65553560980731 3.58499027960792 Q8WVT3 TRAPPC12 Q8WVT3.S111.p_TRAPPC12 Q8WVT3_S109sS111s_2_2_109_111 Q8WVT3 Q8WVT3 Trafficking protein particle complex subunit 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11799.11799.4 32.08 27.76 1.177 5 2 2 0 1166.2375 4501.976 S109s S111s TMT10 88 (R) VRDEAEPGGEGDPGPEPAGTPsPsGEADGDCAPEDAAPSSGGAPR (Q) VRDEAEPGGEGDPGPEPAGT(0.0)PS(0.99)PS(0.99)GEADGDCAPEDAAPS(0.0)S(0.0)GGAPR C:Carbamidomethylation,s:Phosphorylated S TRAPPC12 79830.1 5 4 2064.1 99.88 HUMAN 1 13.796 18.6161 PAGWPDQSLAESDSE-p Q9NYQ6;S2867-p PAGWPDQSLAESDSE 0.364254411664451 0.0681786670618894 0.124333333333333 0.286666666666667 8.13990063009275 15.5170031611469 0.124333333333333 0.286666666666667 0.153465209641418 0.0280737018891158 1.65942126501373 2.97396643885217 Q9NYQ6 CELSR1 Q9NYQ6.S2867.p_CELSR1 Q9NYQ6_S2867sS2871s_2_2_2867_2871 Q9NYQ6 Q9NYQ6 Cadherin EGF LAG seven-pass G-type receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17698.17698.4 14.33 12.68 2.194 4 2 2 0 927.6757 3547.7454 S2867s S2871s TMT10 2852 (K) GDAVANHVPAGWPDQsLAEsDSEDPSGKPR (L) GDAVANHVPAGWPDQS(0.99)LAES(0.99)DS(0.0)EDPS(0.0)GKPR K:TMT10,s:Phosphorylated S CELSR1 334558.1 3 11 1317.1 154.7 HUMAN 1 8.1399 15.517 PAGYKTASPPGPPPY-p P54259;S632-p PAGYKTASPPGPPPY 0.425998757587894 0.557997242538558 0.114 -0.0659999999999999 6.82873928949553 3.41581760056744 0.114 -0.0659999999999999 0.207551593012465 0.455426439746398 1.43100035991939 -0.803552907594806 P54259 ATN1 P54259.S632.p_ATN1 P54259_S632s _1_1_632_632 P54259 P54259 Atrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13082.13082.2 17.49 13.18 2.78 3 1 1 0 853.9496 1626.9256 S632s TMT10 630 (K) TAsPPGPPPYGK (R) T(0.0)AS(0.99)PPGPPPY(0.0)GK K:TMT10,s:Phosphorylated S ATN1 125583.1 4 4 869.1 209.92 HUMAN 1 6.8287 -3.4158 PAHAQPASPQNVLPV-p Q7Z3V4;S419-p PAHAQPASPQNVLPV 0.80621185033956 0.763779713886442 0.0353333333333333 0.0313333333333334 1.80315084441907 1.61708300291011 0.0353333333333333 0.0313333333333334 0.660214282977512 0.689114994259356 0.464753198676879 0.422181512723728 Q7Z3V4 UBE3B Q7Z3V4.S419.p_UBE3B Q7Z3V4_S419s _1_1_419_419 Q7Z3V4 Q7Z3V4|Q7Z3V4-2 Ubiquitin-protein ligase E3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21660.21660.3 17.73 17.73 17.728 2 1 1 0 964.5182 2811.5769 S419s TMT10 406 (K) LLESQEPAHAQPAsPQNVLPVK (S) LLES(0.0)QEPAHAQPAS(0.99)PQNVLPVK K:TMT10,s:Phosphorylated S UBE3B 124579.2 3 1 4246.1 34.75 HUMAN 1 1.8032 1.6171 PAHLLTPSPLSGPGG-p O14686-3;S3202-p PAHLLTPSPLSGPGG 0.145152146047681 0.0134940708843181 -0.319333333333333 0.435333333333333 17.0796581956354 25.9977559501105 -0.319333333333333 0.435333333333333 0.0195899884723723 0.00251318468770539 -3.27834066730103 5.29404388933438 O14686 KMT2D O14686.3.S3202.p_KMT2D O14686-3_S3202s _1_1_3202_3202 O14686-3 O14686|O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27645.27645.3 26.26 19.07 1.726 7 1 1 0 1114.5927 3261.7884 S3202s TMT10 3186 (K) ASFGATGGPPAHLLTPsPLSGPGGSSLLEK (F) AS(0.0)FGAT(0.0)GGPPAHLLT(0.0)PS(0.99)PLS(0.0)GPGGS(0.0)S(0.0)LLEK K:TMT10,s:Phosphorylated S KMT2D 600227.3 4 35 17.1 1042.08 HUMAN 1 -17.0797 25.9978 PAHVPAPSPQGPGGL-p P33897;S733-p PAHVPAPSPQGPGGL 0.215792279025167 0.475640534260882 0.183333333333333 0.073 12.8325114814143 4.3040924481879 0.183333333333333 0.073 0.0520893396564993 0.37118528854551 2.48092973952172 0.974654458136026 P33897 ABCD1 P33897.S733.p_ABCD1 P33897_S733s _1_1_733_733 P33897 P33897 ATP-binding cassette sub-family D member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36485.36485.4 24.72 22.91 3.373 3 1 1 0 890.702 3479.8154 S733s TMT10 713 (R) LQELCQILGEAVAPAHVPAPsPQGPGGLQGAST (-) LQELCQILGEAVAPAHVPAPS(0.99)PQGPGGLQGAS(0.0)T(0.0) C:Carbamidomethylation,s:Phosphorylated S ABCD1 83448.9 4 1 4087.1 37.85 HUMAN 1 12.8325 4.3041 PAIAIDLSGINETND-p Q14651;S324-p PAIAIDLSGINETND 0.385631573417695 0.177169515262384 -0.173666666666667 0.149 7.66082653909467 9.88520309636163 -0.173666666666667 0.149 0.171363114220313 0.102678541326895 -1.57626170828178 1.96099027615083 Q14651 PLS1 Q14651.S324.p_PLS1 Q14651_S324s_1_1_324_324 Q14651 Q14651 Plastin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28373.28373.3 14.06 14.06 2.294 2 1 1 0 913.4626 2657.4034 S324s N327n TMT10 312 (K) GGEDGPAIAIDLsGInETNDLK (R) GGEDGPAIAIDLS(0.99)GIN(0.99)ET(0.0)N(0.0)DLK K:TMT10,s:Phosphorylated S,n:Deamidated PLS1 70651.6 2 7 3150.2 59.17 HUMAN 1 -7.6608 9.8852 PAIEKLLSSDWKERF-p Q9UN79;S120-p PAIEKLLSSDWKERF 0.17810369291245 0.00291598815191838 -0.269 0.644 14.8087410375581 38.2855805406561 -0.269 0.644 0.0330465324693419 0.000148402749028201 -2.84265677240958 9.38634879783594 Q9UN79 SOX13 Q9UN79.S120.p_SOX13 Q9UN79_S120s _1_1_120_120 Q9UN79 Q9UN79 Transcription factor SOX-13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23691.23691.2 8.56 8.56 1.106 2 1 1 0 693.8759 1306.7771 S120s TMT10 118 (K) LLsSDWK (E) LLS(0.99)S(0.0)DWK K:TMT10,s:Phosphorylated S SOX13 69740.6 1 4 1036.1 185.73 HUMAN 1 -14.8087 38.2856 PAINVNDSVTKSKFD-p P23526;S183-p PAINVNDSVTKSKFD 0.379753282388513 0.261750980898724 -0.270333333333333 0.109666666666667 7.76701717756139 7.66837092972937 -0.270333333333333 0.109666666666667 0.167223874741663 0.171065687462382 -1.59471648055211 1.57709510295714 P23526 AHCY P23526.S183.p_AHCY P23526_S183s _1_1_183_183 P23526 P23526|P23526-2 Adenosylhomocysteinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19351.19351.3 13.24 13.24 3.169 2 1 1 0 598.9974 1715.0104 S183s TMT10 175 (K) VPAINVNDsVTK (S) VPAINVNDS(0.99)VT(0.0)K K:TMT10,s:Phosphorylated S AHCY 48285.8 2 2 3386.1 52.27 HUMAN 1 -7.767 7.6684 PAISLSKSLIPSITC-p O75362;S705-p PAISLSKSLIPSITC 0.17928329733391 0.840339481612363 -0.355333333333333 -0.0376666666666667 14.7396064342743 1.06285029702333 -0.355333333333333 -0.0376666666666667 0.0335768040787761 0.782915642550917 -2.82975531637906 -0.289541535030035 O75362 ZNF217 O75362.S705.p_ZNF217 O75362_S705s _1_1_705_705 O75362 O75362 Zinc finger protein 217 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.33983.34029.3 14.3 14.3 3.033 4 1 1 0 737.0432 2129.1539 S705s TMT10 705 (K) sLIPSITCPFCTFK (T) S(0.99)LIPS(0.0)IT(0.0)CPFCT(0.0)FK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF217 117152.8 1 11 394.1 330.8 HUMAN 1 -14.7396 -1.0629 PAISPDDSDEEN___-p P24928;S1966-p PAISPDDSDEEN___ 0.936822382599764 0.228308101631791 0.0116666666666667 0.118666666666667 0.551148250079808 8.44966538230706 0.0116666666666667 0.118666666666667 0.880815959454308 0.142900405699036 0.157160667452954 1.71251502193244 P24928 POLR2A P24928.S1966.p_POLR2A P24928_S1966s _1_1_1966_1966 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24250.24527.4 17.95 17.95 1.102 17 1 1 0 954.9163 3736.6711 S1966s TMT10 1937 (K) GSTYSPTSPGYSPTSPTYSLTSPAISPDDsDEEN (-) GS(0.0)T(0.0)Y(0.0)S(0.0)PT(0.0)S(0.0)PGY(0.0)S(0.0)PT(0.0)S(0.0)PT(0.0)Y(0.0)S(0.0)LT(0.0)S(0.0)PAIS(0.0)PDDS(0.99)DEEN s:Phosphorylated S POLR2A 218541.6 4 14 920.1 200.24 HUMAN 1 0.5511 8.4497 PAITSQNSPEAREES-p P23193;S100-p PAITSQNSPEAREES 0.582849044638515 0.0344908139321733 0.0846666666666667 0.272333333333333 4.31328489616969 19.7015014263683 0.0846666666666667 0.272333333333333 0.370400454049356 0.0107114892768442 0.976560327432293 3.81168120205179 P23193 TCEA1 P23193.S100.p_TCEA1 P23193_S100s _1_1_100_100 P23193 P23193|A0A1W2PPZ5|P23193-2|A0A1W2PRL9 Transcription elongation factor A protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6551.6551.5 24.43 24.43 3.823 8 1 1 0 734.9797 3590.8977 S100s TMT10 90 (K) KKEPAITSQNsPEAREESTSSGNVSNR (K) KKEPAIT(0.0)S(0.0)QNS(0.99)PEAREES(0.0)T(0.0)S(0.0)S(0.0)GNVS(0.0)NR K:TMT10,s:Phosphorylated S TCEA1 34425.5 41 2 704.1 239.31 HUMAN 1 4.3133 19.7015 PAKAANRTPPKSPGD-p O94811;T14-p PAKAANRTPPKSPGD 0.654253083415848 0.0292617695564151 0.0626666666666666 0.279 3.4540039566154 20.7587476352879 0.0626666666666667 0.279 0.451439549985306 0.00839702094514001 0.811208944013978 4.03974663269103 O94811 TPPP O94811.T14.p_TPPP O94811_T14t _1_1_14_14 O94811 O94811 Tubulin polymerization-promoting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5904.5904.3 12.72 12.72 6.192 3 1 1 0 764.0894 2210.286 T14t TMT10 10 (K) AANRtPPKSPGDPSK (D) AANRT(0.99)PPKS(0.0)PGDPS(0.0)K K:TMT10,t:Phosphorylated T TPPP 23864.4 3 1 4652.1 28.33 HUMAN 1 3.454 20.7587 PAKAASLSYRR____-p Q9P275-2;S1120-p PAKAASLSYRR____ 0.872036099278236 0.0262337437786735 -0.0273333333333333 -0.411333333333333 1.16432016916244 21.4949691372685 -0.0273333333333333 -0.411333333333333 0.764835403982256 0.00708766343215067 -0.314603274971236 -4.2030735745438 Q9P275 USP36 Q9P275.2.S1120.p_USP36 Q9P275-2_S1120s _1_1_1120_1120 Q9P275-2 Q9P275-2 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5938.5938.3 9.73 5.8 2.43 3 1 1 0 411.5492 1152.6687 S1120s TMT10 1116 (K) AASLsYRR (-) AAS(0.0)LS(0.99)Y(0.0)RR s:Phosphorylated S USP36 124218 1 20 241.1 413.35 HUMAN 1 -1.1643 -21.495 PAKDARASLGTLPLG-p O75962;S2440-p PAKDARASLGTLPLG 0.118032159976234 0.00272422972588299 -0.469333333333333 -0.866333333333333 19.3148917177139 38.9186877287608 -0.469333333333333 -0.866333333333334 0.0117087579530625 0.000128271811228674 -3.7334369562728 -9.65548009019357 O75962 TRIO O75962.S2440.p_TRIO O75962_S2440s _1_1_2440_2440 O75962 O75962|O75962-4 Triple functional domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15700.15700.4 12.92 12.92 2.57 2 1 1 0 523.3035 2010.2224 S2440s TMT10 2436 (K) DARAsLGTLPLGKPR (A) DARAS(0.99)LGT(0.0)LPLGKPR K:TMT10,s:Phosphorylated S TRIO 349974.9 2 20 450.1 308.79 HUMAN 1 -19.3149 -38.9187 PAKHPNYSPPGSPIE-p Q9UHF7-2;S1094-p PAKHPNYSPPGSPIE 0.115313884527732 0.0391573851860431 0.296 0.318 19.5242363392426 18.8925167124725 0.296 0.318 0.0111577433117739 0.012904712359577 3.77758212048455 3.64203048071709 Q9UHF7 TRPS1 Q9UHF7.2.S1094.p_TRPS1 Q9UHF7-2_S1094s _1_1_1094_1094 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11713.11923.3 15.56 15.56 4.725 3 1 1 0 654.3365 1881.0271 S1094s TMT10 1090 (K) HPNYsPPGSPIEK (Y) HPNY(0.0)S(0.99)PPGS(0.0)PIEK K:TMT10,s:Phosphorylated S TRPS1 145246 20 37 14.1 1150.14 HUMAN 1 19.5242 18.8925 PAKKAAVTPGKKAAA-p P19338;T84-p PAKKAAVTPGKKAAA 0.0775649771385732 0.00357603011858158 0.369 -0.739333333333333 23.7340192080563 36.4535742080972 0.369 -0.739333333333333 0.00423251084125152 0.000226278129056279 4.73012430654107 -8.64504094500842 P19338 NCL P19338.T84.p_NCL P19338_T84t _1_1_84_84 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7422.7422.3 11.19 6.16 99 1 1 1 0 632.7327 1816.219 T84t TMT10 80 (K) KAAVtPGKK (A) KAAVT(1.0)PGKK K:TMT10,t:Phosphorylated T NCL 76670.1 8 3 114.1 570.88 HUMAN 1 23.734 -36.4536 PAKKESVSPEDSEKK-p P35251;S368-p PAKKESVSPEDSEKK 0.330875085214081 0.115402032684411 -0.314333333333333 0.199 8.97621349751492 12.3731899958534 -0.314333333333333 0.199 0.12658395195815 0.0579003248592643 -1.80424518977773 2.39746815368666 P35251 RFC1 P35251.S368.p_RFC1 P35251_S368s _1_1_368_368 P35251 P35251|P35251-2|A0A1W2PP02 Replication factor C subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7675.7675.3 14.86 14.86 3.149 3 1 1 0 668.0162 1922.0685 S368s TMT10 364 (K) KESVsPEDSEK (K) KES(0.0)VS(0.99)PEDS(0.0)EK K:TMT10,s:Phosphorylated S RFC1 128765.8 19 11 316.1 367.51 HUMAN 1 -8.9762 12.3732 PAKLARRSQERDNLG-p Q9UKL0;S127-p PAKLARRSQERDNLG 0.892926925432374 0.451534163853148 -0.02 0.075 0.963154122102173 4.60221908467315 -0.02 0.075 0.801096045283674 0.346559725962433 -0.264610317624532 1.03043626207769 Q9UKL0 RCOR1 Q9UKL0.S127.p_RCOR1 Q9UKL0_S127s _1_1_127_127 Q9UKL0 Q9UKL0 REST corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32737.32737.5 24.29 19.3 6.566 4 1 1 0 815.0179 3991.0999 S127s Hydrogen 127 (R) sQERDNLGMLVWSPNQNLSEAKLDEYIAIAK (E) S(0.99)QERDNLGMLVWS(0.0)PNQNLS(0.0)EAKLDEY(0.0)IAIAK K:TMT10-Lys-Only,s:Phosphorylated S RCOR1 53440.6 43 3 318.1 366.35 HUMAN 1 -0.9632 4.6022 PAKNAQKSNQNGKDS-p P06748;S207-p PAKNAQKSNQNGKDS 0.536318608089857 0.00855566836817945 0.104333333333333 -0.599 5.00556326357314 29.3327045083274 0.104333333333333 -0.599 0.315822941140953 0.00116608322883964 1.10507750817345 -6.22206409837314 P06748 NPM1 P06748.S207.p_NPM1 P06748_S207s _1_1_207_207 P06748 P06748|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.3961.3961.4 10.27 2.92 10.275 5 1 1 0 593.3141 2290.2718 S207s TMT10 207 (K) sNQNGKDSKPSSTPR (S) S(0.99)NQNGKDS(0.0)KPS(0.0)S(0.0)T(0.0)PR K:TMT10,s:Phosphorylated S NPM1 32745.6 4 14 78.1 640.75 HUMAN 1 5.0056 -29.3327 PAKPGLGSPGRYSPV-p Q86XL3;S914-p PAKPGLGSPGRYSPV 0.710615292623816 0.0377456784762596 -0.0586666666666667 -0.632 2.78979417857354 19.1188523036934 -0.0586666666666667 -0.632 0.526042196062653 0.0122493986748459 -0.67738387639038 -3.68908675745061 Q86XL3 ANKLE2 Q86XL3.S914.p_ANKLE2 Q86XL3_S914sS919s_2_2_914_919 Q86XL3 Q86XL3 Ankyrin repeat and LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12478.12478.4 7.39 7.39 1.254 6 2 2 0 852.9246 3248.7653 S914s S919s TMT10 900 (R) NSVAGSNPAKPGLGsPGRYsPVHGSQLR (R) NS(0.0)VAGS(0.0)NPAKPGLGS(0.99)PGRY(0.0)S(0.99)PVHGS(0.0)QLR K:TMT10,s:Phosphorylated S ANKLE2 104968.3 1 15 897.1 204.02 HUMAN 1 -2.7898 -19.1189 PAKVLDASGHHETLI-p Q969R8;S104-p PAKVLDASGHHETLI 0.0305108291507796 0.725099524334075 -0.962 0.147333333333333 35.4222746615094 1.9224401937082 -0.962 0.147333333333333 0.000286927737519814 0.642326708351372 -8.26725632281321 0.491500262366884 Q969R8 ITFG2 Q969R8.S104.p_ITFG2 Q969R8_S104s _1_1_104_104 Q969R8 Q969R8|Q969R8-2 KICSTOR complex protein ITFG2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16866.16866.4 21.2 21.2 6.633 2 1 1 0 725.8826 2820.5408 S104s TMT10 100 (K) VLDAsGHHETLIGEEQRPVFK (Q) VLDAS(0.99)GHHET(0.0)LIGEEQRPVFK K:TMT10,s:Phosphorylated S ITFG2 50110.8 3 1 2867.1 67.83 HUMAN 1 -35.4223 1.9224 PALALPVTPQKEWLH-p Q9BWH6;T321-p PALALPVTPQKEWLH 0.18709748510332 0.00378564011731053 -0.321333333333333 -0.649333333333333 14.3033219458072 35.9094197157045 -0.321333333333333 -0.649333333333333 0.037125114812516 0.000256482671396294 -2.74878095700666 -8.43510388948301 Q9BWH6 RPAP1 Q9BWH6.T321.p_RPAP1 Q9BWH6_T321t _1_1_321_321 Q9BWH6 Q9BWH6|Q9BWH6-2|H3BRE8 RNA polymerase II-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23215.23215.3 22.6 22.6 99 1 1 1 0 819.1263 2375.395 T321t Hydrogen 307 (R) DKLEPEAPALALPVtPQK (E) DKLEPEAPALALPVT(1.0)PQK K:TMT10-Lys-Only,t:Phosphorylated T RPAP1 154292.4 4 3 996.1 190.51 HUMAN 1 -14.3033 -35.9094 PALARKNSPGNGSAL-p Q9UKE5;S688-p PALARKNSPGNGSAL 0.328930040693458 0.0175725277227525 -0.144666666666667 -0.410666666666667 9.0264515960497 24.194577820426 -0.144666666666667 -0.410666666666667 0.125128097204543 0.00380664360352367 -1.81294195872471 -4.8368529737519 Q9UKE5 TNIK Q9UKE5.S688.p_TNIK Q9UKE5_S688s_1_1_688_688 Q9UKE5 Q9UKE5|Q9UKE5-4|Q9UKE5-2|Q9UKE5-6|Q9UKE5-3|Q9UKE5-7|Q9UKE5-5|Q9UKE5-8 TRAF2 and NCK-interacting protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6902.7216.2 13.91 13.91 3.967 2 1 1 0 897.469 1712.9808 S688s N691n TMT10 686 (R) KNsPGnGSALGPR (L) KN(0.0)S(0.99)PGN(0.99)GS(0.0)ALGPR K:TMT10,s:Phosphorylated S,n:Deamidated TNIK 155453.9 7 38 131.1 535.29 HUMAN 1 -9.0265 -24.1946 PALEGPWSPRHTQPQ-p Q8IW93;S118-p PALEGPWSPRHTQPQ 0.929907092825432 0.0503543895796313 0.018 -0.238333333333333 0.626510919713112 17.3480831356027 0.018 -0.238333333333333 0.865663104935723 0.018415846503217 0.177376754891716 -3.32890852831235 Q8IW93 ARHGEF19 Q8IW93.S118.p_ARHGEF19 Q8IW93_S101sS118s_2_2_101_118 Q8IW93 Q8IW93|Q8IW93-2 Rho guanine nucleotide exchange factor 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23617.23617.3 10.42 9.67 99 2 2 2 0 915.4062 2584.2717 S101s S118s TMT10 99 (R) AGsWPHCPGAQPPALEGPWsPR (H) AGS(1.0)WPHCPGAQPPALEGPWS(1.0)PR C:Carbamidomethylation,s:Phosphorylated S ARHGEF19 90051.5 1 6 2080.1 98.61 HUMAN 1 0.6265 -17.3481 PALGEASSDDDLFQS-p Q641Q2;S1180-p PALGEASSDDDLFQS 0.297330507583042 0.158409733807383 -0.164666666666667 -0.147666666666667 9.91108622196608 10.5259553140996 -0.164666666666667 -0.147666666666667 0.102068416657423 0.0885940322639717 -1.9662671518961 -2.07236548688696 Q641Q2 FAM21A Q641Q2.S1180.p_FAM21A Q641Q2_S1179sS1180s_2_2_1179_1180 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28037.28037.5 20.82 20.82 10.832 4 2 2 0 762.9905 3650.991 S1179s S1180s TMT10 1169 (K) SPMFPALGEAssDDDLFQSAKPKPAK (K) S(0.0)PMFPALGEAS(0.99)S(0.99)DDDLFQS(0.0)AKPKPAK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 8 73 12.1 1178.3 HUMAN 1 -9.9111 -10.526 PALKRGPSVTRNLGE-p P51788;S704-p PALKRGPSVTRNLGE 0.64300099764055 0.0645436584836467 -0.159333333333333 -0.497 3.58462876673129 15.840656142502 -0.159333333333333 -0.497 0.438063555075803 0.0260575983582278 -0.836848812672888 -3.03553555374151 P51788 CLCN2 P51788.S704.p_CLCN2 P51788_S704s _1_1_704_704 P51788 P51788|P51788-3|P51788-5|P51788-4 Chloride channel protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3477.3477.3 8.53 8.53 2.61 2 1 1 0 361.1955 1001.6053 S704s TMT10 701 (K) RGPsVTR (N) RGPS(0.99)VT(0.0)R s:Phosphorylated S CLCN2 99503.6 1 4 1767.1 116.44 HUMAN 1 -3.5846 -15.8407 PALLTPRSPVVTIMG-p P46199;S180-p PALLTPRSPVVTIMG 0.584827398456479 0.867561724658442 0.140666666666667 0.0486666666666667 4.28333383505637 0.868114129696597 0.140666666666667 0.0486666666666669 0.372963744538282 0.818820273566474 0.970916292410609 0.240437726454965 P46199 MTIF2 P46199.S180.p_MTIF2 P46199_S180s _1_1_180_180 P46199 P46199 Translation initiation factor IF-2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7331.7331.3 7.93 3.04 5.624 2 1 1 0 595.9729 1705.9257 S180s Hydrogen 180 (R) sPVVTIMGHVDHGK (T) S(0.99)PVVT(0.0)IMGHVDHGK K:TMT10-Lys-Only,s:Phosphorylated S MTIF2 81886.4 2 1 7063.1 7.93 HUMAN 1 4.2833 0.8681 PALPREGSPGDQAAA-p Q8N720-2;S60-p PALPREGSPGDQAAA 0.553679016615691 0.0221420189415373 0.085 0.316333333333333 4.74012687867325 22.6047151708134 0.085 0.316333333333333 0.335727805847364 0.00548944556595064 1.05621237946917 4.45671845776412 Q8N720 ZNF655 Q8N720.2.S60.p_ZNF655 Q8N720-2_S60s _1_1_60_60 Q8N720-2 Q8N720-2|F8WDU5|C9JNK1|F8WE52|C9J0V9 Isoform 2 of Zinc finger protein 655 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19223.19223.3 11.92 11.92 11.917 2 1 1 0 589.2968 1685.902 S60s TMT10 58 (R) EGsPGDQAAALLTAR (Y) EGS(0.99)PGDQAAALLT(0.0)AR s:Phosphorylated S ZNF655 20175.4 1 1 4215.2 35.29 HUMAN 1 4.7401 22.6047 PALQSSDSGDLGKWQ-p Q9UHF7-2;S404-p PALQSSDSGDLGKWQ 0.468270975753483 0.00520869187654939 -0.130666666666667 0.600666666666667 6.08545601085992 33.2073677388865 -0.130666666666667 0.600666666666667 0.24629432146821 0.00047781879212859 -1.2997725852908 7.45701028485736 Q9UHF7 TRPS1 Q9UHF7.2.S404.p_TRPS1 Q9UHF7-2_S404s _1_1_404_404 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3|E5RJ97 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20179.20179.2 15.47 12.47 1.101 4 1 1 0 1007.0186 1933.0642 S404s TMT10 395 (K) SIPALQSSDsGDLGK (W) S(0.0)IPALQS(0.0)S(0.0)DS(0.99)GDLGK K:TMT10,s:Phosphorylated S TRPS1 145246 1 13 14.1 1150.14 HUMAN 1 -6.0855 33.2074 PALSRRGSLGEEGSE-p Q14934-3;S352-p PALSRRGSLGEEGSE 0.886027178849554 0.0513969838193508 0.0236666666666667 0.273333333333333 1.03040330577884 17.2059396716312 0.0236666666666667 0.273333333333333 0.788786863850587 0.0190285647694457 0.281487485077082 3.30075374782108 Q14934 NFATC4 Q14934.3.S352.p_NFATC4 Q14934-3_S352s _1_1_352_352 Q14934-3 Q14934-2|Q14934-3|Q14934-9|Q14934-10|Q14934-11|Q14934-12|Q14934-13|Q14934-14|Q14934-4|Q14934-5|Q14934-6|Q14934-7|Q14934-8 Isoform 3 of Nuclear factor of activated T-cells, cytoplasmic 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18365.18569.3 22.53 21.71 5.399 2 1 1 0 821.4266 2382.2979 S352s TMT10 350 (R) RGsLGEEGSEPPPPPPLPLAR (D) RGS(0.99)LGEEGS(0.0)EPPPPPPLPLAR s:Phosphorylated S NFATC4 102537.7 3 14 1768.1 116.39 HUMAN 1 1.0304 17.2059 PALTASQSVHEQPTK-p Q9UKE5;S610-p PALTASQSVHEQPTK 0.748530975556737 0.297228334148234 -0.0593333333333334 0.154666666666667 2.39063599299734 6.95537824431962 -0.0593333333333334 0.154666666666667 0.576682006280917 0.201586839303083 -0.593672885984955 1.45280131576381 Q9UKE5 TNIK Q9UKE5.S610.p_TNIK Q9UKE5_S610s _1_1_610_610 Q9UKE5 Q9UKE5|Q9UKE5-4|Q9UKE5-2|Q9UKE5-6|Q9UKE5-3|Q9UKE5-7|Q9UKE5-5|Q9UKE5-8 TRAF2 and NCK-interacting protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9426.9426.3 13.96 13.96 1.111 5 1 1 0 802.0806 2324.261 S610s TMT10 600 (K) SQGPALTASQsVHEQPTK (G) S(0.0)QGPALT(0.0)AS(0.0)QS(0.99)VHEQPT(0.0)K K:TMT10,s:Phosphorylated S TNIK 155453.9 1 35 131.1 535.29 HUMAN 1 -2.3906 6.9554 PALYFCGSIRGGRED-p O43598;S28-p PALYFCGSIRGGRED 0.189011352569334 0.878083176837687 0.396666666666667 -0.0233333333333333 14.1681436140288 0.792992193615548 0.396666666666667 -0.0233333333333333 0.0382988416221214 0.833106994414795 2.72384248298807 -0.221093810103051 O43598 DNPH1 O43598.S28.p_DNPH1 O43598_S28s _1_1_28_28 O43598 O43598|O43598-2 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17180.17180.3 13.74 12.72 8.133 2 1 1 0 663.6595 1908.9952 S28s TMT10 16 (R) GEPGRPALYFCGsIR (G) GEPGRPALY(0.0)FCGS(0.99)IR C:Carbamidomethylation,s:Phosphorylated S DNPH1 19222.2 4 2 2326.1 87.8 HUMAN 1 14.1681 -0.793 PAMRRRRSSDPLGDT-p Q7Z6Z7;S648-p PAMRRRRSSDPLGDT 0.282807904661198 0.0642136422645853 0.177 0.228666666666667 10.3686982427675 15.8723303585738 0.177 0.228666666666667 0.0918607899378044 0.0258682449174408 2.04584511867613 3.04158662086499 Q7Z6Z7 HUWE1 Q7Z6Z7.S648.p_HUWE1 Q7Z6Z7_S648s _1_1_648_648 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33192.33192.2 10.3 10.3 1.106 5 1 1 0 1222.5639 2364.155 S648s TMT10 648 (R) sSDPLGDTASNLGSAVDELMR (H) S(0.99)S(0.0)DPLGDT(0.0)AS(0.0)NLGS(0.0)AVDELMR s:Phosphorylated S HUWE1 485818.9 18 3 11.1 1210.45 HUMAN 1 10.3687 15.8723 PAMRRSLSVEHLETK-p P26045;S359-p PAMRRSLSVEHLETK 0.476173375403983 0.86592242319165 -0.115333333333333 0.017 5.93171472491371 0.880543068475879 -0.115333333333333 0.017 0.255169361854461 0.816480267270931 -1.27238956838193 0.243615896610727 P26045 PTPN3 P26045.S359.p_PTPN3 P26045_S359s _1_1_359_359 P26045 P26045|J3KN34|P26045-2 Tyrosine-protein phosphatase non-receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14760.14760.2 14.27 14.27 2.796 3 1 1 0 840.9515 1600.931 S359s TMT10 357 (R) SLsVEHLETK (S) S(0.0)LS(0.99)VEHLET(0.0)K K:TMT10,s:Phosphorylated S PTPN3 105129.1 7 1 1253.1 161.68 HUMAN 1 -5.9317 0.8805 PANKRPMSSPEMKSA-p P51610;S2019-p PANKRPMSSPEMKSA 0.796845374189086 0.0987267906142391 -0.0423333333333333 -0.307 1.90317660431529 13.2920538849567 -0.0423333333333333 -0.307 0.645182144264782 0.0468591721234923 -0.487251413674963 -2.56238526155089 P51610 HCFC1 P51610.S2019.p_HCFC1 P51610_S2019s _1_1_2019_2019 P51610 A6NEM2|P51610-4|P51610-2 Host cell factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8501.8501.2 7.1 7.1 1.137 2 1 1 0 800.9039 1520.8329 S2019s TMT10 2016 (K) RPMsSPEMK (S) RPMS(0.99)S(0.0)PEMK K:TMT10,s:Phosphorylated S HCFC1 210725.7 7 15 625.1 258.74 HUMAN 1 -1.9032 -13.2921 PANPSLHSPVPDASH-p O60244;S1136-p PANPSLHSPVPDASH 0.59351749575714 0.279436795787995 0.073 -0.129333333333333 4.17866075977248 7.29599867744699 0.073 -0.129333333333333 0.382062069713838 0.18638035399285 0.951130385908629 -1.51229751427559 O60244 MED14 O60244.S1136.p_MED14 O60244_S1136s _1_1_1136_1136 O60244 O60244 Mediator of RNA polymerase II transcription subunit 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14075.14075.3 16.04 16.04 2.417 5 1 1 0 893.4195 2598.2754 S1136s TMT10 1124 (R) MPGMSPANPSLHsPVPDASHSPR (A) MPGMS(0.0)PANPS(0.0)LHS(0.99)PVPDAS(0.0)HS(0.0)PR s:Phosphorylated S MED14 162087.1 2 5 1597.1 128.88 HUMAN 1 4.1787 -7.296 PANRLAGSPPGSGQW-p Q4KMQ1;S241-p PANRLAGSPPGSGQW 0.0889673370705568 0.00298393706599723 -0.345 -0.803333333333333 22.3787829412282 37.948389486745 -0.343236238588661 -0.803333333333333 0.00578258074667983 0.000160384003945388 -4.40908895327482 -9.24578602521006 Q4KMQ1 TPRN Q4KMQ1.S241.p_TPRN Q4KMQ1_S241s _1_1_241_241 Q4KMQ1 Q4KMQ1 Taperin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16348.16348.2 15.82 11.66 3.714 2 1 1 0 1089.1064 2097.2424 S241s TMT10 238 (R) LAGsPPGSGQWKPK (V) LAGS(0.99)PPGS(0.0)GQWKPK K:TMT10,s:Phosphorylated S TPRN 75839.7 11 3 1021.1 187.66 HUMAN 1 -22.3788 -37.9484 PANSQKASPKKMPKS-p Q8WUU4;S370-p PANSQKASPKKMPKS 0.152173457127959 0.00184331395778701 -0.284333333333333 -1.42233333333333 16.4640088865182 42.975710162277 -0.284333333333333 -1.42233333333333 0.0225735109203295 5.03998198121465e-05 -3.15779962717921 -11.554300810616 Q8WUU4 ZNF296 Q8WUU4.S370.p_ZNF296 Q8WUU4_S370s _1_1_370_370 Q8WUU4 Q8WUU4|Q8IX33 Zinc finger protein 296 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6010.6010.3 10.27 10.27 2.16 3 1 1 0 671.0324 1931.1165 S370s TMT10 361 (R) TDPANSQKAsPK (K) T(0.0)DPANS(0.0)QKAS(0.99)PK K:TMT10,s:Phosphorylated S ZNF296 51836.4 2 5 3351.1 53.13 HUMAN 1 -16.464 -42.9757 PANVAPQSPPAVKAK-p C9K0J5;S946-p PANVAPQSPPAVKAK 0.421140316027267 0.820259663171498 0.107333333333333 0.0223333333333334 6.91581617551297 1.20427398843128 0.107333333333333 0.0223333333333334 0.203431584818627 0.757831409212817 1.44626908495797 0.324328756742306 C9K0J5 RAPH1 C9K0J5.S946.p_RAPH1 C9K0J5_S946s_1_1_946_946 C9K0J5 C9K0J5|Q70E73 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26552.26552.4 24.78 24.78 5.379 4 1 1 0 1121.3597 4401.4612 N941n S946s TMT10 916 (K) QIASQFPPPPTPPAMESQPLKPVPAnVAPQsPPAVK (A) QIAS(0.0)QFPPPPT(0.0)PPAMES(0.0)QPLKPVPAN(1.0)VAPQS(0.99)PPAVK K:TMT10,n:Deamidated,s:Phosphorylated S RAPH1 141861.7 10 7 619.1 260.34 HUMAN 1 6.9158 1.2043 PANWTPDSPTIKPSP-p P30048;S237-p PANWTPDSPTIKPSP 0.91195125119209 0.25012165665546 -0.017 0.113666666666667 0.778826569151846 7.93037944153092 -0.017 0.113666666666667 0.835828822351738 0.161050491979412 -0.217440584138716 1.6225713516913 P30048 PRDX3 P30048.S237.p_PRDX3 P30048_S237s_1_1_237_237 P30048 P30048|P30048-2 Thioredoxin-dependent peroxide reductase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22317.22317.5 10.91 10.91 1.964 7 1 1 0 831.6208 4073.1046 N232n S237s TMT10 218 (K) AFQYVETHGEVCPAnWTPDsPTIKPSPAASK (E) AFQY(0.0)VET(0.0)HGEVCPAN(1.0)WT(0.0)PDS(0.99)PT(0.0)IKPS(0.0)PAAS(0.0)K C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S PRDX3 28034.5 2 1 6564.1 10.91 HUMAN 1 -0.7788 7.9304 PAPAAPRSPNLAGKA-p Q9Y4B5;S77-p PAPAAPRSPNLAGKA 0.701391719781544 0.084895509806555 -0.0706666666666667 -0.316 2.89814070240953 14.178221592995 -0.0706666666666667 -0.316 0.51308099674801 0.0382100706504957 -0.699646488724357 -2.72403995684466 Q9Y4B5 MTCL1 Q9Y4B5.S77.p_MTCL1 Q9Y4B5_S77s _1_1_77_77 Q9Y4B5 Q9Y4B5 Microtubule cross-linking factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11342.11342.4 16.75 14.29 99 1 1 1 0 489.7764 1876.1169 S77s TMT10 69 (R) APAPAAPRsPNLAGK (A) APAPAAPRS(1.0)PNLAGK K:TMT10,s:Phosphorylated S MTCL1 210777.5 3 1 1389.1 147.22 HUMAN 1 -2.8981 -14.1782 PAPADFLSLSSETKP-p Q6P2E9;S583-p PAPADFLSLSSETKP 0.465203752033176 0.126150361692995 -0.115 -0.177666666666667 6.13293486630202 11.8555079996413 -0.115 -0.177666666666667 0.243616395611581 0.0652302735875591 -1.30821042440215 -2.30559755229882 Q6P2E9 EDC4 Q6P2E9.S583.p_EDC4 Q6P2E9_S583s _1_1_583_583 Q6P2E9 Q6P2E9|Q6P2E9-2 Enhancer of mRNA-decapping protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32970.32970.4 22.38 19.97 2.669 4 1 1 0 728.1623 2829.6581 S583s TMT10 572 (R) IVELPAPADFLsLSSETKPK (L) IVELPAPADFLS(0.99)LS(0.0)S(0.0)ET(0.0)KPK K:TMT10,s:Phosphorylated S EDC4 153084.9 6 6 177.1 481.34 HUMAN 1 -6.1329 -11.8555 PAPADKLTPKGPGQV-p Q6P2E9;T693-p PAPADKLTPKGPGQV 0.451943451197645 0.0924402057109601 -0.218666666666667 -0.77 6.36472086247298 13.6774792175382 -0.218666666666667 -0.77 0.230955289786879 0.0428797335709072 -1.34928540818955 -2.63235644030779 Q6P2E9 EDC4 Q6P2E9.T693.p_EDC4 Q6P2E9_T693t _1_1_693_693 Q6P2E9 Q6P2E9|Q6P2E9-2 Enhancer of mRNA-decapping protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29811.29811.4 12.29 12.29 99 1 1 1 0 617.8788 2388.5197 T693t TMT10 679 (R) GLLPGLLPAPADKLtPK (G) GLLPGLLPAPADKLT(1.0)PK K:TMT10,t:Phosphorylated T EDC4 153084.9 1 9 177.1 481.34 HUMAN 1 -6.3647 -13.6775 PAPAGPASDTEEEEP-p Q8WXE0;S927-p PAPAGPASDTEEEEP 0.283283360364086 0.0368850339996155 0.151 0.340666666666667 10.3465592642246 19.2743896046537 0.151 0.340666666666667 0.0923302631999015 0.011818464078751 2.04198924928718 3.7216056246538 Q8WXE0 CASKIN2 Q8WXE0.S927.p_CASKIN2 Q8WXE0_S927sT929t_2_2_927_929 Q8WXE0 Q8WXE0|Q8WXE0-2 Caskin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19023.19023.4 8.55 8.55 1.529 7 2 2 0 1020.9631 3920.8511 S927s T929t TMT10 906 (R) TLSEPAGPSEPPGPPAPAGPAsDtEEEEPGPEGTPPSR (G) T(0.0)LS(0.0)EPAGPS(0.0)EPPGPPAPAGPAS(0.99)DT(0.99)EEEEPGPEGT(0.0)PPS(0.0)R s:Phosphorylated S,t:Phosphorylated T CASKIN2 127351.5 1 16 984.1 192.08 HUMAN 1 10.3466 19.2744 PAPALSVSPQNNHSP-p Q9NQT8;S1432-p PAPALSVSPQNNHSP 0.198398862430063 0.851091892922386 0.198666666666667 -0.0196666666666666 13.6763376913117 0.984609292191069 0.198666666666667 -0.0196666666666667 0.0428910058241829 0.797148201844073 2.63368336550878 -0.269986825087787 Q9NQT8 KIF13B Q9NQT8.S1432.p_KIF13B Q9NQT8_S1432sS1438s_2_2_1432_1438 Q9NQT8 Q9NQT8 Kinesin-like protein KIF13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33152.33152.4 16.69 16.69 1.229 6 2 2 0 1004.5132 3855.0805 S1432s S1438s TMT10 1422 (R) GIAPAPALSVsPQNNHsPDPGLSNLAASYLNPVK (S) GIAPAPALS(0.0)VS(0.99)PQNNHS(0.99)PDPGLS(0.0)NLAAS(0.0)Y(0.0)LNPVK K:TMT10,s:Phosphorylated S KIF13B 204097.3 1 18 335.1 355.82 HUMAN 1 13.6763 -0.9846 PAPAPAASPQPGSRG-p Q8IX07;S909-p PAPAPAASPQPGSRG 0.247048592039774 0.290159788499933 -0.248666666666667 -0.191 11.6039535540192 7.0911995412808 -0.248666666666667 -0.191 0.069120145646938 0.195379973279325 -2.26227747905311 -1.47655467752103 Q8IX07 ZFPM1 Q8IX07.S909.p_ZFPM1 Q8IX07_S909s _1_1_909_909 Q8IX07 Q8IX07 Zinc finger protein ZFPM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6607.6607.3 16.1 11.95 2.198 4 1 1 0 798.731 2314.2101 S909s TMT10 894 (R) TPADRGPSPAPAPAAsPQPGSR (G) T(0.0)PADRGPS(0.0)PAPAPAAS(0.99)PQPGS(0.0)R s:Phosphorylated S ZFPM1 106540.7 1 9 961.1 194.31 HUMAN 1 -11.604 -7.0912 PAPAPKFSPVTPKFT-p Q15942;S267-p PAPAPKFSPVTPKFT 0.447471486981734 0.0121193045393011 -0.105 -0.413333333333333 6.44127737034438 26.7660151883922 -0.105 -0.413333333333333 0.226919732516911 0.00210570961969212 -1.36281178118352 -5.4979116761991 Q15942 ZYX Q15942.S267.p_ZYX Q15942_S267s _1_1_267_267 Q15942 Q15942|Q15942-2 Zyxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17274.17274.3 16.65 16.65 1.554 4 1 1 0 867.4861 2520.4793 S267s TMT10 254 (R) GPPASSPAPAPKFsPVTPK (F) GPPAS(0.0)S(0.0)PAPAPKFS(0.99)PVT(0.0)PK K:TMT10,s:Phosphorylated S ZYX 62474.4 5 5 1126.1 174.71 HUMAN 1 -6.4413 -26.766 PAPAPSRSPSAQCPF-p P78411;S385-p PAPAPSRSPSAQCPF 0.73663700724385 0.710128970605937 0.051 0.0393333333333334 2.5156019072956 2.04498969762728 0.051 0.0393333333333333 0.560324754178494 0.624454831616108 0.620183257910454 0.518681715993042 P78411 IRX5 P78411.S385.p_IRX5 P78411_S385s _1_1_385_385 P78411 P78411|P78411-2|P78411-3|H0YML8 Iroquois-class homeodomain protein IRX-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16497.16497.3 11.16 11.16 1.115 6 1 1 0 935.4633 2724.4089 S385s TMT10 376 (R) ASPAPAPSRsPSAQCPFPGGTVLSR (P) AS(0.0)PAPAPS(0.0)RS(0.99)PS(0.0)AQCPFPGGT(0.0)VLS(0.0)R C:Carbamidomethylation,s:Phosphorylated S IRX5 50702.2 4 6 1529.1 133.88 HUMAN 1 2.5156 2.045 PAPASPGSSNDSSAR-p Q66K74;S762-p PAPASPGSSNDSSAR 0.550983208393473 0.997855839640213 0.117666666666667 -0.000333333333333315 4.77684935340842 0.012576464283793 0.117666666666667 -0.00033333333333333 0.332900973113899 0.997108350975953 1.06300128040136 -0.00379421362701456 Q66K74 MAP1S Q66K74.S762.p_MAP1S Q66K74_S759sS762s_2_2_759_762 Q66K74 Q66K74|Q66K74-2 Microtubule-associated protein 1S HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11455.11455.3 9.08 9.08 1.127 5 2 2 0 758.9954 2099.0389 M753m S759s S762s TMT10 750 (K) AVPmAPAPAsPGsSNDSSAR (S) AVPM(1.0)APAPAS(0.99)PGS(0.99)S(0.0)NDS(0.0)S(0.0)AR m:Oxidized methionine,s:Phosphorylated S MAP1S 113179.3 7 19 456.1 307.14 HUMAN 1 4.7768 -0.0126 PAPEQFQSREDFRTA-p Q9P0V3;S279-p PAPEQFQSREDFRTA 0.739247480976757 0.212381106076791 0.0696666666666667 0.206 2.48704064783817 8.85269678961426 0.0696666666666667 0.206 0.564021858438614 0.130235781682197 0.614149657300242 1.78223463408694 Q9P0V3 SH3BP4 Q9P0V3.S279.p_SH3BP4 Q9P0V3_S279s _1_1_279_279 Q9P0V3 Q9P0V3|Q9P0V3-2 SH3 domain-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14480.14480.5 13.36 6.23 3.139 3 1 1 0 648.5334 3158.6648 S279s TMT10 271 (K) SPAPEQFQsREDFRTAWLNHRK (L) S(0.0)PAPEQFQS(0.99)REDFRT(0.0)AWLNHRK K:TMT10,s:Phosphorylated S SH3BP4 108463.7 5 11 782.1 225.91 HUMAN 1 2.487 8.8527 PAPERALSPAELRAL-p A0A0G2JPP5;S1486-p PAPERALSPAELRAL 0.560899556742354 0.886117462189191 0.102333333333333 0.04 4.62444152202382 0.737883822707019 0.102333333333333 0.04 0.344790941874434 0.843745787793445 1.03476237290718 0.206752392231333 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1486.p_SCRIB A0A0G2JPP5_S1486s _1_1_1486_1486 A0A0G2JPP5 A0A0G2JPP5|Q14160|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14467.14682.2 9.25 4.68 99 1 1 1 0 583.3134 1085.6516 S1486s TMT10 1484 (R) ALsPAELR (A) ALS(1.0)PAELR s:Phosphorylated S SCRIB 178690.9 2 36 22.1 1004.81 HUMAN 1 4.6244 0.7379 PAPGPAASPQTLDHS-p P55317;S331-p PAPGPAASPQTLDHS 0.534705148071304 0.170111781453783 0.0983333333333333 0.161333333333333 5.03347541479568 10.1135130992043 0.0983333333333333 0.161333333333333 0.313799652647802 0.0974201267046278 1.11018914032821 2.00061924701064 P55317 FOXA1 P55317.S331.p_FOXA1 P55317_S331s _1_1_331_331 P55317 P55317|P55317-2 Hepatocyte nuclear factor 3-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16761.16965.4 26.19 26.19 1.256 7 1 1 0 921.7161 3603.8655 S331s TMT10 317 (K) TGQLEGAPAPGPAAsPQTLDHSGATATGGASELK (T) T(0.0)GQLEGAPAPGPAAS(0.99)PQT(0.0)LDHS(0.0)GAT(0.0)AT(0.0)GGAS(0.0)ELK K:TMT10,s:Phosphorylated S FOXA1 49375.2 8 4 1359.1 150.2 HUMAN 1 5.0335 10.1135 PAPGPHSSPPEEKGA-p O75182;S740-p PAPGPHSSPPEEKGA 0.805930071607606 0.496812863211401 -0.0393333333333333 -0.0666666666666667 1.80644038721881 4.06406858867016 -0.0393333333333334 -0.0666666666666667 0.659714396166146 0.392277267206705 -0.465497008539217 -0.929197479907573 O75182 SIN3B O75182.S740.p_SIN3B O75182_S740s _1_1_740_740 O75182 O75182|O75182-2|M0QYC5 Paired amphipathic helix protein Sin3b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5756.5756.4 11.3 7.82 1.11 2 1 1 0 646.3685 2502.485 S740s TMT10 731 (R) KKPAPGPHSsPPEEK (G) KKPAPGPHS(0.0)S(0.99)PPEEK K:TMT10,s:Phosphorylated S SIN3B 134148.1 5 2 3891.1 41.26 HUMAN 1 -1.8064 -4.0641 PAPGVNESPMMTWGE-p Q96DF8;S313-p PAPGVNESPMMTWGE 0.498153657512036 0.242542402704093 -0.237666666666667 0.114333333333333 5.57557375330706 8.10519200677035 -0.237666666666667 0.114712215414288 0.276976309720939 0.154696610921925 -1.2085677967447 1.6528726567056 Q96DF8 DGCR14 Q96DF8.S313.p_DGCR14 Q96DF8_S313s _1_1_313_313 Q96DF8 Q96DF8 Protein DGCR14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32639.32639.5 20.41 20.41 3.753 9 1 1 0 1180.9757 5820.9082 S313s TMT10 295 (R) VGGFGFVATPSPAPGVNEsPMMTWGEVENTPLRVEGSETPYVDRTPGPAFK (I) VGGFGFVAT(0.0)PS(0.0)PAPGVNES(0.99)PMMT(0.0)WGEVENT(0.0)PLRVEGS(0.0)ET(0.0)PY(0.0)VDRT(0.0)PGPAFK K:TMT10,s:Phosphorylated S DGCR14 52624.2 1 4 924.1 199.86 HUMAN 1 -5.5756 8.1052 PAPKLVESPKEGKGS-p Q96S94;S338-p PAPKLVESPKEGKGS 0.30236319502448 0.891629239657338 -0.276666666666667 -0.014 9.73377857360938 0.699201199043808 -0.276666666666667 -0.014 0.106321756459967 0.851294603030448 -1.93549357289418 -0.196606783141311 Q96S94 CCNL2 Q96S94.S338.p_CCNL2 Q96S94_S338s _1_1_338_338 Q96S94 Q96S94|Q96S94-3 Cyclin-L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11911.12109.2 13.6 13.6 99 1 1 1 0 877.5071 1674.0405 S338s TMT10 335 (K) LVEsPKEGK (G) LVES(1.0)PKEGK K:TMT10,s:Phosphorylated S CCNL2 58659.8 6 2 2007.1 102.73 HUMAN 1 -9.7338 -0.6992 PAPKRKRSPPLGGAP-p Q8NBZ0;S98-p PAPKRKRSPPLGGAP 0.272222580986907 0.658518664687292 0.194666666666667 0.047 10.7057294266672 2.48216067333309 0.194666666666667 0.047 0.0850015915331952 0.564655980990344 2.10463189072183 0.613039348779975 Q8NBZ0 INO80E Q8NBZ0.S98.p_INO80E Q8NBZ0_S98s _1_1_98_98 Q8NBZ0 Q8NBZ0|I3L270|I3NI13 INO80 complex subunit E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28645.28645.5 20.37 15.16 1.379 14 1 1 0 889.6696 4364.3452 S98s Hydrogen 96 (R) KRsPPLGGAPSPSSLSLPPSTGFPLQASGVPSPYLSSLASSR (Y) KRS(0.99)PPLGGAPS(0.0)PS(0.0)S(0.0)LS(0.0)LPPS(0.0)T(0.0)GFPLQAS(0.0)GVPS(0.0)PY(0.0)LS(0.0)S(0.0)LAS(0.0)S(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S INO80E 26591.7 8 3 2287.1 89.59 HUMAN 1 10.7057 2.4822 PAPLTPATPSSLDPF-p Q7Z6Z7;T3927-p PAPLTPATPSSLDPF 0.222079109388678 0.901928595146833 0.21 0.0146666666666667 12.5758213201454 0.624806134815656 0.21 0.0146666666666667 0.0552608890905158 0.86600298009812 2.43490570010907 0.17690573800297 Q7Z6Z7 HUWE1 Q7Z6Z7.T3927.p_HUWE1 Q7Z6Z7_S3919sT3924tT3927t_3_3_3919_3927 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.31273.31477.4 18.16 18.16 1.52 7 3 3 0 1061.0157 4001.1424 S3919s T3924t T3927t TMT10 3905 (R) ESQLAHIKDEPPPLsPAPLtPAtPSSLDPFFSR (E) ES(0.0)QLAHIKDEPPPLS(0.99)PAPLT(0.99)PAT(0.99)PS(0.0)S(0.0)LDPFFS(0.0)R K:TMT10,s:Phosphorylated S,t:Phosphorylated T HUWE1 485818.9 2 80 11.1 1210.45 HUMAN 1 12.5758 0.6248 PAPLVAPSPGKAEAS-p B0QXZ6;S228-p PAPLVAPSPGKAEAS 0.0675927151943729 0.0099533913721456 -0.378 -0.413333333333333 25.2433300786352 28.1339070672717 -0.378 -0.413333333333333 0.00298997111052093 0.00153677148406759 -5.10566997493421 -5.8752908760377 B0QXZ6 CBX6 B0QXZ6.S228.p_CBX6 B0QXZ6_S228s _1_1_228_228 B0QXZ6 O95503|B0QXZ6 Chromobox protein homolog 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30446.30446.4 15.7 12.92 15.698 2 1 1 0 723.9167 2812.6733 S228s TMT10 211 (K) FGAFALYKPPPAPLVAPsPGK (A) FGAFALY(0.0)KPPPAPLVAPS(0.99)PGK K:TMT10,s:Phosphorylated S CBX6 42145.5 2 3 1678.1 121.53 HUMAN 1 -25.2433 -28.1339 PAPPAPASPWDSKKH-p Q9H7N4;S548-p PAPPAPASPWDSKKH 0.490767105486659 0.0699771423651989 0.1 -0.372666666666667 5.6920895397348 15.3597989649207 0.1 -0.372666666666667 0.269644176965956 0.0291085185839019 1.2295115341813 -2.94423009212038 Q9H7N4 SCAF1 Q9H7N4.S548.p_SCAF1 Q9H7N4_S548s _1_1_548_548 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16296.16296.3 24.06 22.64 3.845 7 1 1 0 922.1134 2684.3568 S548s TMT10 531 (K) EAASSSSGTQPAPPAPAsPWDSK (K) EAAS(0.0)S(0.0)S(0.0)S(0.0)GT(0.0)QPAPPAPAS(0.99)PWDS(0.0)K K:TMT10,s:Phosphorylated S SCAF1 139895 6 8 76.1 647.25 HUMAN 1 5.6921 -15.3598 PAPPEPGSPAPGEGP-p P0C1Z6;S180-p PAPPEPGSPAPGEGP 0.754219877579276 0.0450582319936359 -0.0526666666666667 0.293333333333333 2.34059277399865 18.0187139559151 -0.0526666666666667 0.293333333333333 0.583365474552412 0.0157807850521675 -0.582974083578521 3.46321465940401 P0C1Z6 TFPT P0C1Z6.S180.p_TFPT P0C1Z6_S180s _1_1_180_180 P0C1Z6 P0C1Z6|P0C1Z6-2 TCF3 fusion partner HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7558.7558.3 17.28 17.28 7.334 3 1 1 0 741.6979 2143.1093 S180s TMT10 171 (R) RTPAPPEPGsPAPGEGPSGR (K) RT(0.0)PAPPEPGS(0.99)PAPGEGPS(0.0)GR s:Phosphorylated S TFPT 28334.9 12 3 969.1 193.6 HUMAN 1 -2.3406 18.0187 PAPPHEGSPRDQAMA-p P17029;S208-p PAPPHEGSPRDQAMA 0.916102775158455 0.109333006519697 -0.024 -0.169333333333333 0.744141419936149 12.6973450898307 -0.024 -0.169333333333333 0.842530939437091 0.0537360192682848 -0.208407342189526 -2.45536064276029 P17029 ZKSCAN1 P17029.S208.p_ZKSCAN1 P17029_S208s _1_1_208_208 P17029 P17029|E9PC66 Zinc finger protein with KRAB and SCAN domains 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13123.13330.4 22.49 22.49 99 1 1 1 0 507.5171 1947.0762 S208s TMT10 194 (R) ALPAAHIPAPPHEGsPR (D) ALPAAHIPAPPHEGS(1.0)PR s:Phosphorylated S ZKSCAN1 64598.8 3 2 2843.1 68.21 HUMAN 1 -0.7441 -12.6973 PAPPMAHSPLHRSVS-p Q9NRA0-5;S476-p PAPPMAHSPLHRSVS 0.39970562633161 0.141049720219454 -0.115666666666667 -0.167666666666667 7.3505898793196 11.2067277109875 -0.115666666666667 -0.167666666666667 0.184052199608256 0.0757403362600032 -1.52225324631715 -2.19135712792858 Q9NRA0 SPHK2 Q9NRA0.5.S476.p_SPHK2 Q9NRA0-5_S476s _1_1_476_476 Q9NRA0-5 Q9NRA0-5|M0R344|Q9NRA0-2|Q9NRA0-3|Q9NRA0-4|E9PCV4 Isoform 5 of Sphingosine kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16901.16901.3 16.37 14.49 4.2 4 1 1 0 826.0802 2396.2594 S476s TMT10 461 (K) SELTLTPDPAPPMAHsPLHR (S) S(0.0)ELT(0.0)LT(0.0)PDPAPPMAHS(0.99)PLHR s:Phosphorylated S SPHK2 81287.6 2 4 3042.1 62.32 HUMAN 1 -7.3506 -11.2067 PAPPQHFSPRTAQGL-p Q9P275-2;S546-p PAPPQHFSPRTAQGL 0.114170009135743 0.002898066187464 -0.319 -0.891666666666667 19.6378185939684 38.3548325439278 -0.319 -0.891666666666667 0.0108697145848278 0.000146055106455487 -3.80164986430858 -9.41545423552047 Q9P275 USP36 Q9P275.2.S546.p_USP36 Q9P275-2_S546s _1_1_546_546 Q9P275-2 Q9P275-2|A0A075B784 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9304.9304.4 15.01 15.01 99 1 1 1 0 564.8301 2176.3322 S546s TMT10 536 (K) VKKPAPPQHFsPR (T) VKKPAPPQHFS(1.0)PR K:TMT10,s:Phosphorylated S USP36 124218 5 6 241.1 413.35 HUMAN 1 -19.6378 -38.3548 PAPPRASSLGEIDES-p Q16513;S583-p PAPPRASSLGEIDES 0.797447625384409 0.838699280813853 -0.0413333333333333 0.0316666666666667 1.89632580499469 1.07404691700897 -0.0413333333333333 0.0316666666666667 0.646200693106524 0.780899794065296 -0.485718239580018 0.292321467080106 Q16513 PKN2 Q16513.S583.p_PKN2 Q16513_S583s _1_1_583_583 Q16513 Q16513|Q16513-2|Q16513-3|Q16513-4|Q16513-5 Serine/threonine-protein kinase N2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12913.12913.2 15.76 15.76 1.419 4 1 1 0 786.8443 1492.7126 S583s Hydrogen 581 (R) ASsLGEIDESSELR (V) AS(0.0)S(0.99)LGEIDES(0.0)S(0.0)ELR s:Phosphorylated S PKN2 112888.4 12 8 389.1 332.6 HUMAN 1 -1.8963 1.074 PAPPTQQSSAE____-p P16989;S369-p PAPPTQQSSAE____ 0.689454079566116 0.31520680144833 0.0703333333333333 0.135666666666667 3.02884976504496 6.62623994133005 0.0703333333333333 0.135666666666667 0.497868928794539 0.217458308659607 0.726265943462692 1.39505141927117 P16989 YBX3 P16989.S369.p_YBX3 P16989_S369sS370s_2_2_369_370 P16989 P16989 Y-box-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11703.11703.3 10.19 10.19 1.368 4 2 2 0 757.6526 2111.009 S369s S370s TMT10 354 (K) AGEAPTENPAPPTQQssAE (-) AGEAPT(0.0)ENPAPPT(0.0)QQS(0.99)S(0.99)AE s:Phosphorylated S YBX3 40089.2 1 8 929.1 199.34 HUMAN 1 3.0288 6.6262 PAPQPQQSPAPRPQS-p Q9NWA0;S46-p PAPQPQQSPAPRPQS 0.125003663942402 0.376225771726283 0.301666666666667 0.143666666666667 18.7869162644485 5.63665974917729 0.301666666666667 0.143666666666667 0.0132223416170766 0.273107750477405 3.6233100919088 1.21928228743588 Q9NWA0 MED9 Q9NWA0.S46.p_MED9 Q9NWA0_S46sS53s_2_2_46_53 Q9NWA0 Q9NWA0|J3KTK5 Mediator of RNA polymerase II transcription subunit 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23789.23789.5 12.91 12.91 4.044 5 2 2 0 1096.7595 5319.853 S46s S53s TMT10 11 (R) QAEDVLPPTSDQPLPDTKPLPPPQPPPVPAPQPQQsPAPRPQsPAR (A) QAEDVLPPT(0.0)S(0.0)DQPLPDT(0.0)KPLPPPQPPPVPAPQPQQS(0.99)PAPRPQS(0.99)PAR K:TMT10,s:Phosphorylated S MED9 16516.6 1 2 3857.1 41.62 HUMAN 1 18.7869 5.6367 PAPRATSSPMLYEVV-p Q8TEY5;S109-p PAPRATSSPMLYEVV 0.289553205911988 0.145549168976197 0.170666666666667 0.16 10.1488716926705 11.0258483484403 0.170666666666667 0.16 0.0966301893897365 0.0789614591456222 2.00758684144296 2.15966207914618 Q8TEY5 CREB3L4 Q8TEY5.S109.p_CREB3L4 Q8TEY5_S109s_1_1_109_109 Q8TEY5 Q8TEY5|Q8TEY5-2|Q5T4K9 Cyclic AMP-responsive element-binding protein 3-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29512.29512.2 13.13 13.13 1.148 5 1 1 0 1206.0677 2315.1791 S109s M111m TMT10 106 (R) ATSsPmLYEVVYEAGALER (M) AT(0.0)S(0.0)S(0.99)PM(1.0)LY(0.0)EVVY(0.0)EAGALER s:Phosphorylated S,m:Oxidized methionine CREB3L4 43945 10 3 2946.1 65.12 HUMAN 1 10.1489 11.0258 PAPRDRASPAAAEEV-p Q8N3V7-2;S441-p PAPRDRASPAAAEEV 0.722874382459012 0.0159716440659024 -0.0506666666666667 0.416333333333333 2.66648097443717 24.8201254060541 -0.0506666666666667 0.416333333333333 0.541192665943462 0.00329600194567096 -0.651816701970546 4.99219132986753 Q8N3V7 SYNPO Q8N3V7.2.S441.p_SYNPO Q8N3V7-2_S441s _1_1_441_441 Q8N3V7-2 Q8N3V7|Q8N3V7-2|Q8N3V7-3 Isoform 2 of Synaptopodin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24769.24769.3 23.18 23.18 23.181 2 1 1 0 908.7868 2644.3805 S441s TMT10 438 (R) DRAsPAAAEEVVPEWASCLK (S) DRAS(0.99)PAAAEEVVPEWAS(0.0)CLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SYNPO 96794.1 3 5 947.1 196.99 HUMAN 1 -2.6665 24.8201 PAPSAPPSPSAPEPP-p P55198;S382-p PAPSAPPSPSAPEPP 0.0782221681558717 0.0131824458012311 -0.771 0.379333333333333 23.6427366961192 26.1762774466208 -0.771 0.379333333333333 0.00432241369350457 0.00241197196367956 -4.70803482816852 5.34091591657846 P55198 MLLT6 P55198.S382.p_MLLT6 P55198_S382s _1_1_382_382 P55198 P55198|A0A087WW39 Protein AF-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19960.19960.5 21.57 16.76 1.663 6 1 1 0 801.2358 3922.1772 S382s TMT10 369 (K) YSKPTAPAPSAPPsPSAPEPPKADLFEQK (V) Y(0.0)S(0.0)KPT(0.0)APAPS(0.0)APPS(0.99)PS(0.0)APEPPKADLFEQK K:TMT10,s:Phosphorylated S MLLT6 113557.5 1 4 1008.1 189 HUMAN 1 -23.6427 26.1763 PAPSAQQSWAQAFGG-p Q6BDS2;S291-p PAPSAQQSWAQAFGG 0.20352936945728 0.341101601722203 -0.233333333333333 -0.234333333333333 13.3966705536421 6.18759109216388 -0.233333333333333 -0.234333333333333 0.045743874302308 0.240569680152573 -2.58279657281623 -1.31759068105099 Q6BDS2 UHRF1BP1 Q6BDS2.S291.p_UHRF1BP1 Q6BDS2_S291s _1_1_291_291 Q6BDS2 Q6BDS2|H7C1J4 UHRF1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27051.27051.5 16.11 16.11 1.105 10 1 1 0 807.9881 3955.9372 S291s TMT10 273 (K) SLAPEPVQITPPAPSAQQsWAQAFGGSQGNSNSSSSR (L) S(0.0)LAPEPVQIT(0.0)PPAPS(0.0)AQQS(0.99)WAQAFGGS(0.0)QGNS(0.0)NS(0.0)S(0.0)S(0.0)S(0.0)R s:Phosphorylated S UHRF1BP1 160680.5 1 23 398.2 328.88 HUMAN 1 -13.3967 -6.1876 PAPSPAPSPAPAGL_-p Q9BXK1;S246-p PAPSPAPSPAPAGL_ 0.87289946291738 0.103713851860286 -0.03 -0.181666666666667 1.15642299367475 12.9999190629962 -0.03 -0.181666666666667 0.766227439701271 0.0501196574057033 -0.312667988213142 -2.50967538732858 Q9BXK1 KLF16 Q9BXK1.S246.p_KLF16 Q9BXK1_S246s _1_1_246_246 Q9BXK1 Q9BXK1|A0A087WWX5 Krueppel-like factor 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25891.25891.3 12.75 12.75 1.736 9 1 1 0 995.8071 2905.4451 S246s TMT10 224 (R) STSPSDSLPCSLAGSPAPSPAPsPAPAGL (-) S(0.0)T(0.0)S(0.0)PS(0.0)DS(0.0)LPCS(0.0)LAGS(0.0)PAPS(0.0)PAPS(0.99)PAPAGL C:Carbamidomethylation,s:Phosphorylated S KLF16 25886.6 1 6 2479.1 81.75 HUMAN 1 -1.1564 -12.9999 PAPSRDPSPPRKPRP-p Q5C9Z4;S139-p PAPSRDPSPPRKPRP 0.909891750490786 0.20297037548925 -0.0186666666666667 -0.178333333333333 0.804089405821969 9.11064062023251 -0.0186666666666667 -0.178333333333333 0.830980933919827 0.122725818708653 -0.223987625662109 -1.82685110533853 Q5C9Z4 NOM1 Q5C9Z4.S139.p_NOM1 Q5C9Z4_S139s _1_1_139_139 Q5C9Z4 Q5C9Z4 Nucleolar MIF4G domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3669.3669.4 8.34 8.34 8.335 2 1 1 0 428.9757 1632.9132 S139s TMT10 130 (R) ARPAPSRDPsPPR (K) ARPAPS(0.0)RDPS(0.99)PPR s:Phosphorylated S NOM1 96826.2 3 2 2040.1 101.14 HUMAN 1 -0.8041 -9.1106 PAPSRTASFSESRAD-p P53396;S455-p PAPSRTASFSESRAD 0.0395731079578075 0.00112568182952083 -0.758666666666667 -1.04066666666667 31.350576447255 49.1856445749145 -0.758666666666667 -1.04066666666667 0.000732727270411865 1.20624504539742e-05 -6.8537986237776 -15.1484811863998 P53396 ACLY P53396.S455.p_ACLY P53396_S455s _1_1_455_455 P53396 P53396|P53396-2|P53396-3 ATP-citrate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9825.9825.3 17.06 12.56 2.184 4 1 1 0 658.984 1894.9708 S455s Hydrogen 453 (R) TAsFSESRADEVAPAK (K) T(0.0)AS(0.99)FS(0.0)ES(0.0)RADEVAPAK K:TMT10-Lys-Only,s:Phosphorylated S ACLY 121749.9 31 3 1256.1 161.58 HUMAN 1 -31.3506 -49.1856 PAPVPLMSLRTAPAA-p Q9UQ35;S2219-p PAPVPLMSLRTAPAA 0.0941179808048868 0.0849489874738239 0.373666666666667 0.232333333333333 21.827805952572 14.173988973295 0.373666666666667 0.232333333333333 0.00656476833384747 0.0382473282119547 4.28266360950755 2.72326113447152 Q9UQ35 SRRM2 Q9UQ35.S2219.p_SRRM2 Q9UQ35_S2219s _1_1_2219_2219 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28546.28546.3 15.15 15.15 15.154 2 1 1 0 612.3214 1754.9858 S2219s TMT10 2208 (R) MSQVPAPVPLMsLR (T) MS(0.0)QVPAPVPLMS(0.99)LR s:Phosphorylated S SRRM2 300351.7 1 141 2.1 3310.34 HUMAN 1 21.8278 14.174 PAPVVLGSPVVLGPP-p A0A0C4DFM2;S254-p PAPVVLGSPVVLGPP 0.503949388365308 0.037863276489491 -0.0966666666666667 -0.268333333333333 5.49390199755239 19.0931075153376 -0.0966666666666667 -0.268333333333333 0.282234305010348 0.0123222282303808 -1.19384776553483 -3.68371854568929 A0A0C4DFM2 NotFound A0A0C4DFM2.S254.p_NotFound A0A0C4DFM2_S254s _1_1_254_254 A0A0C4DFM2 A0A0C4DFM2|Q6ZN55-2 HCG1643764, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28067.28067.3 17.99 17.99 99 1 1 1 0 764.1005 2210.3222 S254s TMT10 246 (K) APAPVVLGsPVVLGPPVGQAR (V) APAPVVLGS(1.0)PVVLGPPVGQAR s:Phosphorylated S ZNF574 111041.3 2 2 1417.1 144.46 HUMAN 1 -5.4939 -19.0931 PAQDQPRSPVPSAFS-p Q9UQ35;S2449-p PAQDQPRSPVPSAFS 0.854168275342151 0.870006215796507 0.0283333333333333 -0.0163333333333333 1.32772894446917 0.85301078336421 0.0283333333333333 -0.0163333333333333 0.736592182847484 0.82167282079203 0.354179183464269 -0.236567270978987 Q9UQ35 SRRM2 Q9UQ35.S2449.p_SRRM2 Q9UQ35_S2449s _1_1_2449_2449 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20235.20441.5 22.26 22.26 6.054 6 1 1 0 698.5416 3408.7168 S2449s TMT10 2431 (R) MGQAPSQSLLPPAQDQPRsPVPSAFSDQSR (C) MGQAPS(0.0)QS(0.0)LLPPAQDQPRS(0.99)PVPS(0.0)AFS(0.0)DQS(0.0)R s:Phosphorylated S SRRM2 300351.7 29 158 2.1 3310.34 HUMAN 1 1.3277 -0.853 PAQGKGDSIEEILAD-p Q5JTH9;S1072-p PAQGKGDSIEEILAD 0.69315965240548 0.11269709954962 0.0856666666666667 0.242666666666667 2.98733761070077 12.5042274584939 0.0856666666666667 0.242666666666667 0.502650638927217 0.0561794203811517 0.717839249554447 2.42083514594504 Q5JTH9 RRP12 Q5JTH9.S1072.p_RRP12 Q5JTH9_S1072sS1080s_2_2_1072_1080 Q5JTH9 Q5JTH9|Q5JTH9-3|Q5JTH9-2 RRP12-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24683.24683.5 22.92 22.92 22.918 3 2 2 0 1143.0819 5551.4415 S1072s S1080s TMT10 1047 (R) ALSQAAVEEEEEEEEEEEPAQGKGDsIEEILADsEDEEDNEEEER (S) ALS(0.0)QAAVEEEEEEEEEEEPAQGKGDS(0.99)IEEILADS(0.99)EDEEDNEEEER K:TMT10,s:Phosphorylated S RRP12 145125.9 1 10 1122.1 175.08 HUMAN 1 2.9873 12.5042 PAQLNGGSACSSRSD-p Q15599;S269-p PAQLNGGSACSSRSD 0.953497372992588 0.560795794768479 0.0146666666666667 0.066 0.407506482349844 3.3874524237619 0.0146666666666666 0.066 0.910435852671584 0.458410712091326 0.117852191213699 0.797946523609291 Q15599 SLC9A3R2 Q15599.S269.p_SLC9A3R2 Q15599_S269s_1_1_269_269 Q15599 Q15599|Q15599-2|H3BQS0|Q15599-3 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17905.17905.4 26.17 26.17 1.108 9 1 1 0 936.6948 3662.7918 N258n S269s TMT10 241 (R) VTPTEEHVEGPLPSPVTnGTSPAQLNGGsACSSR (S) VT(0.0)PT(0.0)EEHVEGPLPS(0.0)PVT(0.0)N(0.99)GT(0.0)S(0.0)PAQLN(0.0)GGS(0.99)ACS(0.0)S(0.0)R C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S SLC9A3R2 37641.3 1 6 2026.1 101.71 HUMAN 1 0.4075 3.3875 PAQPGHVSPTPATTS-p Q9Y6R0;S263-p PAQPGHVSPTPATTS 0.549966652418693 0.0243258723220295 -0.146 0.325 4.7894857820911 21.9885674979551 -0.146 0.325 0.331933757194936 0.00632620484166475 -1.06533519874185 4.3147558135699 Q9Y6R0 NUMBL Q9Y6R0.S263.p_NUMBL Q9Y6R0_S263s _1_1_263_263 Q9Y6R0 Q9Y6R0|A0A0C4DGH3 Numb-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17225.17225.5 21.88 18.4 1.205 9 1 1 0 999.9232 4915.5954 S263s TMT10 244 (K) AEAAAAPTVAPGPAQPGHVsPTPATTSPGEKGEAGTPVAAGTTAAAIPR (R) AEAAAAPT(0.0)VAPGPAQPGHVS(0.99)PT(0.0)PAT(0.0)T(0.0)S(0.0)PGEKGEAGT(0.0)PVAAGT(0.0)T(0.0)AAAIPR K:TMT10,s:Phosphorylated S NUMBL 65632 2 18 538.2 277.23 HUMAN 1 -4.7895 21.9886 PAQPKKESSPKSQDS-p Q70CQ4;S1099-p PAQPKKESSPKSQDS 0.151152930876387 0.0123406653296955 0.573666666666667 -0.472 16.5377096978654 26.6459954374749 0.573666666666667 -0.472 0.0221936651982 0.0021647136528639 3.17212919380317 -5.4656895233446 Q70CQ4 USP31 Q70CQ4.S1099.p_USP31 Q70CQ4_S1099sS1111s_2_2_1099_1111 Q70CQ4 Q70CQ4|I3L4X5 Ubiquitin carboxyl-terminal hydrolase 31 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7953.7953.4 7.93 7.93 1.774 7 2 2 0 745.6365 2819.5921 S1099s S1111s TMT10 1097 (K) KEsSPKSQDSVSSPsPQK (Q) KES(0.99)S(0.0)PKS(0.0)QDS(0.0)VS(0.0)S(0.0)PS(0.99)PQK K:TMT10,s:Phosphorylated S USP31 148417.6 2 9 1855.1 110.95 HUMAN 1 16.5377 -26.646 PAQPKNLSPREQGKT-p Q6P0Q8;S1698-p PAQPKNLSPREQGKT 0.269658957382444 0.0264684540618575 -0.266333333333333 -0.780333333333333 10.7857728281836 21.4083854875071 -0.266333333333333 -0.780333333333333 0.0834493036806439 0.0072303854701416 -2.11861940913492 -4.18366593318177 Q6P0Q8 MAST2 Q6P0Q8.S1698.p_MAST2 Q6P0Q8_S1698s _1_1_1698_1698 Q6P0Q8 Q6P0Q8|Q6P0Q8-2 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6262.6262.3 10.63 7.97 99 1 1 1 0 522.9519 1486.8742 S1698s TMT10 1696 (K) NLsPREQGK (T) NLS(1.0)PREQGK K:TMT10,s:Phosphorylated S MAST2 197687.5 1 68 121.1 549.41 HUMAN 1 -10.7858 -21.4084 PAQPPQQSPPQQPLP-p Q9Y6X0;S1567-p PAQPPQQSPPQQPLP 0.569827274603092 0.144788199463998 0.0763333333333333 0.196666666666667 4.49389935272805 11.0545826279973 0.0763333333333333 0.196666666666667 0.355312155040252 0.0784407499530701 1.01043775323835 2.16469300409769 Q9Y6X0 SETBP1 Q9Y6X0.S1567.p_SETBP1 Q9Y6X0_S1567s _1_1_1567_1567 Q9Y6X0 Q9Y6X0 SET-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11799.11799.4 21.92 19.28 99 1 1 1 0 920.9888 3600.9741 S1567s TMT10 1555 (K) HKPQAPAQPPQQsPPQQPLPQEEEVK (A) HKPQAPAQPPQQS(1.0)PPQQPLPQEEEVK K:TMT10,s:Phosphorylated S SETBP1 175746.2 2 7 1489.1 137.6 HUMAN 1 4.4939 11.0546 PAQRGEESSEEEEKG-p Q9BW71;S159-p PAQRGEESSEEEEKG 0.111075288137026 0.146270680828253 0.355 0.175333333333333 19.9513812172518 10.9963523762245 0.355 0.175333333333333 0.0101125778569326 0.0794995668407748 3.8685240153048 2.15449936650435 Q9BW71 HIRIP3 Q9BW71.S159.p_HIRIP3 Q9BW71_S159sS160s_2_2_159_160 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11738.11738.4 9.22 9.22 9.218 3 2 2 0 757.8589 2868.483 S159s S160s TMT10 150 (R) DLPAQRGEEssEEEEKGYK (G) DLPAQRGEES(0.99)S(0.99)EEEEKGY(0.0)K K:TMT10,s:Phosphorylated S HIRIP3 62298.3 5 21 178.1 481.23 HUMAN 1 19.9514 10.9964 PAQSQNLSPLSGFSR-p Q9P2M7;S252-p PAQSQNLSPLSGFSR 0.225518171425009 0.0689517361438301 -0.224 -0.239 12.4256341551621 15.4452126701808 -0.224 -0.239 0.0572053417529483 0.028541627445299 -2.4080658187457 -2.96037323106504 Q9P2M7 CGN Q9P2M7.S252.p_CGN Q9P2M7_S252s _1_1_252_252 Q9P2M7 Q9P2M7|Q9P2M7-2 Cingulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15650.15650.4 24.66 24.66 2.415 7 1 1 0 814.9078 3176.6489 S252s TMT10 235 (K) YDNHVGTSKQPAQSQNLsPLSGFSR (S) Y(0.0)DNHVGT(0.0)S(0.0)KQPAQS(0.0)QNLS(0.99)PLS(0.0)GFS(0.0)R K:TMT10,s:Phosphorylated S CGN 136611.7 7 11 239.1 416.31 HUMAN 1 -12.4256 -15.4452 PAQVRPPSPGNIRPV-p Q14244-7;S387-p PAQVRPPSPGNIRPV 0.911753399332893 0.637897843731841 -0.0196666666666667 -0.0613333333333333 0.782589779285679 2.65865025949375 -0.0196666666666667 -0.0613333333333333 0.835104881049905 0.542169364623388 -0.218417559207002 -0.650099121626771 Q14244 MAP7 Q14244.7.S387.p_MAP7 Q14244-7_S387s _1_1_387_387 Q14244-7 A0A087WZ40|Q14244-7|Q14244-4|Q14244-6|Q14244-2|Q14244-3|Q14244-5 Isoform 7 of Ensconsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13928.13928.5 11.64 11.64 99 1 1 1 0 479.4777 2313.3919 S387s TMT10 378 (K) AAPAQVRPPsPGNIRPVK (R) AAPAQVRPPS(1.0)PGNIRPVK K:TMT10,s:Phosphorylated S MAP7 87064.8 5 14 581.1 266.4 HUMAN 1 -0.7826 -2.6587 PARASAPSPNAQVAC-p Q14258;S100-p PARASAPSPNAQVAC 0.990301842077856 0.269356727755373 -0.00266666666666668 -0.112333333333333 0.087009138872692 7.50246010832758 -0.00266666666666667 -0.112333333333333 0.980164764300261 0.177727236957758 -0.0260321504839956 -1.54825170966312 Q14258 TRIM25 Q14258.S100.p_TRIM25 Q14258_S100s_1_1_100_100 Q14258 Q14258 E3 ubiquitin/ISG15 ligase TRIM25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11117.11436.3 21.5 21.5 3.724 2 1 1 0 789.0415 2284.1578 S100s N102n TMT10 96 (R) ASAPsPnAQVACDHCLK (E) AS(0.0)APS(0.99)PN(1.0)AQVACDHCLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated TRIM25 72626.7 10 2 2037.1 101.35 HUMAN 1 -0.087 -7.5025 PARDYNNSYYGLMLF-p P51784;S606-p PARDYNNSYYGLMLF 0.690693421685413 0.394759442902435 -0.0966666666666667 0.0826666666666667 3.01279941491191 5.36542060202737 -0.0966666666666666 0.0826666666666667 0.499712322022482 0.290708640264432 -0.723010806837653 1.17037027986571 P51784 USP11 P51784.S606.p_USP11 P51784_S606s _1_1_606_606 P51784 P51784|G5E9A6 Ubiquitin carboxyl-terminal hydrolase 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35309.35309.3 23.07 23.07 2.637 5 1 1 0 955.4753 2784.4381 S606s TMT10 602 (R) DYNNsYYGLMLFGHPLLVSVPR (D) DY(0.0)NNS(0.99)Y(0.0)Y(0.0)GLMLFGHPLLVS(0.0)VPR s:Phosphorylated S USP11 111012.7 3 1 2240.1 92.03 HUMAN 1 -3.0128 5.3654 PARGPSGSPRTQGRG-p O43237;S391-p PARGPSGSPRTQGRG 0.218298581818512 0.135404959445197 0.274666666666667 -0.238666666666667 12.7382772233514 11.4464815865242 0.274666666666667 -0.238666666666667 0.0532319379961773 0.0716723825037854 2.46401110144691 -2.23346811364286 O43237 DYNC1LI2 O43237.S391.p_DYNC1LI2 O43237_S391s _1_1_391_391 O43237 O43237|O43237-2 Cytoplasmic dynein 1 light intermediate chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3738.3738.3 10.21 6.85 2.997 4 1 1 0 555.6067 1584.8291 S391s TMT10 380 (R) ASESPARGPSGsPR (T) AS(0.0)ES(0.0)PARGPS(0.0)GS(0.99)PR s:Phosphorylated S DYNC1LI2 54383.6 2 6 576.1 267.98 HUMAN 1 12.7383 -11.4465 PARKLTATPTPLGGM-p O75533;T434-p PARKLTATPTPLGGM 0.995213264133306 0.939983752782634 -0.001 0.00900000000000002 0.0400877062397797 0.38325260906917 -0.000999999999999997 0.00900000000000003 0.990811935136653 0.915534552004859 -0.0120573283858612 0.111099088440701 O75533 SF3B1 O75533.T434.p_SF3B1 O75533_T434tT436t_2_2_434_436 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21668.21668.4 19.19 19.19 2.486 5 2 2 0 752.6103 2847.4897 T434t T436t TMT10 430 (R) KLTAtPtPLGGMTGFHMQTEDR (T) KLT(0.0)AT(0.99)PT(0.99)PLGGMT(0.0)GFHMQT(0.0)EDR K:TMT10,t:Phosphorylated T SF3B1 146569.5 19 43 53.1 735.77 HUMAN 1 -0.0401 0.3833 PARKPPLSPAQTNPV-p Q8IY33;S153-p PARKPPLSPAQTNPV 0.46557623899687 0.252687403228308 0.111 -0.128666666666667 6.12635418667798 7.86784939322107 0.111 -0.128666666666667 0.243985816990953 0.163386082814858 1.3070414291667 -1.61172537284647 Q8IY33 MICALL2 Q8IY33.S153.p_MICALL2 Q8IY33_S153s _1_1_153_153 Q8IY33 Q8IY33|Q8IY33-2|Q8IY33-4 MICAL-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13630.13630.3 14.74 14.74 3.701 2 1 1 0 724.0776 2090.2486 S153s TMT10 149 (R) KPPLsPAQTNPVVQR (R) KPPLS(0.99)PAQT(0.0)NPVVQR K:TMT10,s:Phosphorylated S MICALL2 98299.3 8 14 387.1 332.82 HUMAN 1 6.1264 -7.8678 PARNRSASITNLSLD-p Q9Y2I7;S307-p PARNRSASITNLSLD 0.696949484695718 0.873268242874909 -0.0606666666666667 -0.018 2.94525749197357 0.829157781283029 -0.0606666666666667 -0.018 0.507544645957879 0.826198157020222 -0.709271376830011 -0.230435589553681 Q9Y2I7 PIKFYVE Q9Y2I7.S307.p_PIKFYVE Q9Y2I7_S307s _1_1_307_307 Q9Y2I7 Q9Y2I7|Q9Y2I7-4|Q9Y2I7-3|Q9Y2I7-2 1-phosphatidylinositol 3-phosphate 5-kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16863.16863.2 12.51 5.84 2.131 4 1 1 0 743.3806 1405.7848 S307s TMT10 305 (R) SAsITNLSLDR (S) S(0.0)AS(0.99)IT(0.0)NLS(0.0)LDR s:Phosphorylated S PIKFYVE 239756.4 1 4 1398.1 146.55 HUMAN 1 -2.9453 -0.8292 PARPSGPSKALKLGA-p B0YIW6;S264-p PARPSGPSKALKLGA 0.0910642878001055 0.929000739289431 -0.384 -0.0226666666666667 22.1407678246394 0.451587334418854 -0.384 -0.0226666666666666 0.00610834021029336 0.901241676040448 -4.35419374505967 -0.130015343547291 B0YIW6 NotFound B0YIW6.S264.p_NotFound B0YIW6_S264s _1_1_264_264 B0YIW6 B0YIW6|P48444|P48444-2 Archain 1, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8196.8196.4 12 11.9 1.567 2 1 1 0 444.0013 1693.0161 S264s TMT10 253 (K) VAPAPARPSGPsK (A) VAPAPARPS(0.0)GPS(0.99)K K:TMT10,s:Phosphorylated S ARCN1 62195.8 1 4 1797.1 114.24 HUMAN 1 -22.1408 -0.4516 PARRHRHSIQLDLGD-p Q7Z591;S1387-p PARRHRHSIQLDLGD 0.980839788800884 0.474920903996438 0.00466666666666666 0.110666666666667 0.166664577269596 4.31228966861107 0.00466666666666665 0.110666666666667 0.962351089386486 0.370485344600826 0.0494283869470549 0.976197934161138 Q7Z591 AKNA Q7Z591.S1387.p_AKNA Q7Z591_S1387s_1_1_1387_1387 Q7Z591 Q7Z591|Q7Z591-2|Q7Z591-7|Q7Z591-8|Q7Z591-5|Q7Z591-4 AT-hook-containing transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19828.19828.5 12.49 12.49 99 1 1 1 0 512.0751 2475.372 S1387s N1399n TMT10 1384 (R) HRHsIQLDLGDLEELnK (A) HRHS(1.0)IQLDLGDLEELN(1.0)K K:TMT10,s:Phosphorylated S,n:Deamidated AKNA 155935.2 1 16 737.1 234.85 HUMAN 1 0.1667 4.3123 PARRNRLSDGEHTDT-p Q8IZC4;S571-p PARRNRLSDGEHTDT 0.0392760190421918 0.00360242696478209 -0.543 -1.262 31.7282063153334 36.3774929698466 -0.543 -1.262 0.000671706217807126 0.000230277074281297 -6.97566032646506 -8.61541428394287 Q8IZC4 RTKN2 Q8IZC4.S571.p_RTKN2 Q8IZC4_S571s _1_1_571_571 Q8IZC4 Q8IZC4 Rhotekin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4732.4732.3 10.51 10.51 1.688 3 1 1 0 637.6506 1830.971 S571s TMT10 568 (R) NRLsDGEHTDTK (T) NRLS(0.99)DGEHT(0.0)DT(0.0)K K:TMT10,s:Phosphorylated S RTKN2 70215.5 2 2 4808.1 26.36 HUMAN 1 -31.7282 -36.3775 PARSSPPSPAYERGL-p Q8NC74;S254-p PARSSPPSPAYERGL 0.859922192386175 0.0656899773285024 -0.0403333333333333 -0.369 1.27975207978115 15.7338647583222 -0.0403333333333334 -0.369 0.744774488695317 0.0267062877573823 -0.342650521261695 -3.01516796899289 Q8NC74 RBBP8NL Q8NC74.S254.p_RBBP8NL Q8NC74_S254s _1_1_254_254 Q8NC74 Q8NC74 RBBP8 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6672.6672.3 11.65 7.7 5.244 4 1 1 0 467.2202 1319.6793 S254s TMT10 250 (R) SSPPsPAYER (G) S(0.0)S(0.0)PPS(0.99)PAY(0.0)ER s:Phosphorylated S RBBP8NL 71886.7 1 7 565.1 270.89 HUMAN 1 -1.2798 -15.7339 PARSSSYSEANEPDL-p Q5VWQ8;S730-p PARSSSYSEANEPDL 0.528361651166894 0.149942720699681 -0.110333333333333 -0.165333333333333 5.12786588909355 10.8436800371924 -0.110333333333333 -0.165333333333333 0.307053046779163 0.0823440069230095 -1.12743939402432 -2.12780172184378 Q5VWQ8 DAB2IP Q5VWQ8.S730.p_DAB2IP Q5VWQ8_S730s _1_1_730_730 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15472.15472.3 14.78 14.78 1.179 5 1 1 0 841.721 2443.1811 S730s TMT10 726 (R) SSSYsEANEPDLQMANGGK (S) S(0.0)S(0.0)S(0.0)Y(0.0)S(0.99)EANEPDLQMANGGK K:TMT10,s:Phosphorylated S DAB2IP 132592.9 6 10 281.1 388.28 HUMAN 1 -5.1279 -10.8437 PARVNGGTDEENGEE-p Q9UHG0;T408-p PARVNGGTDEENGEE 0.886118944763575 0.0145286126333491 0.0213333333333333 0.399333333333333 1.02561225931653 25.4632130160926 0.0213333333333333 0.399333333333333 0.789657517280038 0.00284235748426378 0.280290711152906 5.15546856985604 Q9UHG0 DCDC2 Q9UHG0.T408.p_DCDC2 Q9UHG0_T408t _1_1_408_408 Q9UHG0 Q9UHG0|Q9UHG0-2 Doublecortin domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.34962.34962.4 14.71 10.55 99 1 1 1 0 856.4226 3342.7065 T408t TMT10 404 (R) VNGGtDEENGEELQQVNNELQLVLDK (E) VNGGT(1.0)DEENGEELQQVNNELQLVLDK K:TMT10,t:Phosphorylated T DCDC2 52889.9 3 4 1697.1 120.47 HUMAN 1 1.0256 25.4632 PASCPLDSDLSEDED-p P25686;S247-p PASCPLDSDLSEDED 0.52155238503858 0.0191485533380821 -0.171666666666667 0.332333333333333 5.22807590050695 23.6181244371927 -0.171666666666667 0.332333333333333 0.300049156318118 0.00434697914149063 -1.14569472906811 4.69664658509102 P25686 DNAJB2 P25686.S247.p_DNAJB2 P25686_S247s _1_1_247_247 P25686 P25686 DnaJ homolog subfamily B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.32986.32986.5 20.12 20.12 1.117 9 1 1 0 1133.5403 5583.7496 S247s TMT10 231 (R) SGGTQVQQTPASCPLDsDLSEDEDLQLAMAYSLSEMEAAGKKPAGGR (E) S(0.0)GGT(0.0)QVQQT(0.0)PAS(0.0)CPLDS(0.99)DLS(0.0)EDEDLQLAMAY(0.0)S(0.0)LS(0.0)EMEAAGKKPAGGR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DNAJB2 35693.5 6 1 2124.1 96.68 HUMAN 1 -5.2281 23.6181 PASEKRNTLDVGEVL-p E7EUN2;T210-p PASEKRNTLDVGEVL 0.567533687034341 0.0237986460494067 0.157333333333333 -0.323 4.52942131337985 22.1346977616127 0.157333333333333 -0.323 0.352417826714942 0.00611688370678062 1.01706971680204 -4.34816500557012 E7EUN2 NotFound E7EUN2.T210.p_NotFound E7EUN2_T210t _1_1_210_210 E7EUN2 E7EUN2 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23565.23565.4 17.98 17.98 14.089 3 1 1 0 721.3793 2802.5362 T210t TMT10 208 (K) RNtLDVGEVLSKNDALSDLER (W) RNT(0.99)LDVGEVLS(0.0)KNDALS(0.0)DLER K:TMT10,t:Phosphorylated T AGAP1 117700.5 2 8 1235.1 163.67 HUMAN 1 4.5294 -22.1347 PASELWSSDGAAGLV-p Q9H1A4;S51-p PASELWSSDGAAGLV 0.775106158812795 0.0601157292691754 0.041 -0.264666666666667 2.1198993933173 16.2663758778924 0.041 -0.264666666666667 0.613776223460698 0.0236244883885648 0.535193886868707 -3.11725751717452 Q9H1A4 ANAPC1 Q9H1A4.S51.p_ANAPC1 Q9H1A4_S50sS51s_2_2_50_51 Q9H1A4 Q9H1A4|F8WAS1 Anaphase-promoting complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31240.31240.5 29.03 29.03 1.282 5 2 2 0 734.5653 3508.8688 S50s S51s TMT10 41 (R) QLQPASELWssDGAAGLVGSLQEVTIHEK (Q) QLQPAS(0.0)ELWS(0.99)S(0.99)DGAAGLVGS(0.0)LQEVT(0.0)IHEK K:TMT10,s:Phosphorylated S ANAPC1 218664.2 8 16 460.1 305.66 HUMAN 1 2.1199 -16.2664 PASGPAPSAVSSSSP-p J3KQ26;S207-p PASGPAPSAVSSSSP 0.549764101123738 0.109405773824245 -0.082 -0.377333333333333 4.79503930654323 12.6929848866031 -0.082 -0.377333333333333 0.33150956941586 0.0537899959199146 -1.06636057051268 -2.45457994138898 J3KQ26 ARMC5 J3KQ26.S207.p_ARMC5 J3KQ26_S207s _1_1_207_207 J3KQ26 J3KQ26 Armadillo repeat-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13829.13829.4 25.39 25.39 1.102 15 1 1 0 1095.7803 4300.1279 S207s TMT10 172 (R) AAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPsAVSSSSPTPPVR (L) AAAAGS(0.0)APS(0.0)QAGPGS(0.0)APS(0.0)S(0.0)AAS(0.0)GAS(0.0)S(0.0)PAPAS(0.0)GPAPS(0.99)AVS(0.0)S(0.0)S(0.0)S(0.0)PT(0.0)PPVR s:Phosphorylated S ARMC5 109548.8 1 2 3442.1 50.92 HUMAN 1 -4.795 -12.693 PASNRAVTPSSEAKD-p Q99700;T741-p PASNRAVTPSSEAKD 0.706190608952105 0.0611592109714098 -0.0726666666666667 -0.242 2.84140144473875 16.1591067648514 -0.0726666666666667 -0.239334760533976 0.519828223716825 0.0242152704308125 -0.68801084672224 -3.09658529241539 Q99700 ATXN2 Q99700.T741.p_ATXN2 Q99700_T741t _1_1_741_741 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7853.7853.2 13.09 7.54 1.292 3 1 1 0 714.3815 1347.7884 T741t TMT10 739 (R) AVtPSSEAK (D) AVT(0.99)PS(0.0)S(0.0)EAK K:TMT10,t:Phosphorylated T ATXN2 140907.9 7 16 176.1 481.52 HUMAN 1 -2.8414 -16.1591 PASPAPLSPLEVELD-p O43524;S12-p PASPAPLSPLEVELD 0.897783336973234 0.0910630018690853 0.0253333333333333 -0.305 0.9191698813503 13.7650514431645 0.0253333333333333 -0.305 0.809250566073124 0.0420237549838924 0.253478310869981 -2.64832554003198 O43524 FOXO3 O43524.S12.p_FOXO3 O43524_S12s _1_1_12_12 O43524 O43524 Forkhead box protein O3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30704.30704.4 21.94 15.24 1.207 3 1 1 0 788.6307 3071.532 S12s Acetyl 2 (M) AEAPASPAPLsPLEVELDPEFEPQSRPR (S) AEAPAS(0.0)PAPLS(0.99)PLEVELDPEFEPQS(0.0)RPR s:Phosphorylated S FOXO3 71560.7 3 2 938.1 198.15 HUMAN 1 0.9192 -13.7651 PASPDGRTSPINEDI-p Q9P2R6;T599-p PASPDGRTSPINEDI 0.329632714614673 0.0689926563147461 0.183 -0.223333333333333 9.00769320879633 15.4397882712664 0.183 -0.223333333333333 0.125669729165264 0.0285772986100407 1.8096946266248 -2.95934707039501 Q9P2R6 RERE Q9P2R6.T599.p_RERE Q9P2R6_T599tS600s_2_2_599_600 Q9P2R6 Q9P2R6|B1AKN3|Q9P2R6-2 Arginine-glutamic acid dipeptide repeats protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8606.8606.5 11.64 9.06 1.658 3 2 2 0 592.111 2796.5935 T599t S600s TMT10 589 (R) KKQPASPDGRtsPINEDIR (S) KKQPAS(0.0)PDGRT(0.99)S(0.99)PINEDIR K:TMT10,t:Phosphorylated T,s:Phosphorylated S RERE 173561.6 8 12 278.1 389.04 HUMAN 1 9.0077 -15.4398 PASPGGLSDGNPSLS-p Q6P1R3;S32-p PASPGGLSDGNPSLS 0.338303322331957 0.529793584650787 0.175333333333333 0.0686666666666667 8.75934723101162 3.70981693458302 0.175333333333333 0.0686666666666667 0.133065440777594 0.425616353493645 1.76670561251594 0.861099622162337 Q6P1R3 MSANTD2 Q6P1R3.S32.p_MSANTD2 Q6P1R3_S27sS32s_2_2_27_32 Q6P1R3 Q6P1R3|Q6P1R3-3|E9PPE2|B4E1M0 Myb/SANT-like DNA-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24971.24971.3 17.08 15.69 2.682 7 2 2 0 986.4471 2797.3876 S27s S32s TMT10 20 (K) MEVLSPAsPGGLsDGNPSLSDPSTPR (G) MEVLS(0.0)PAS(0.99)PGGLS(0.99)DGNPS(0.0)LS(0.0)DPS(0.0)T(0.0)PR s:Phosphorylated S MSANTD2 61945.8 2 7 1991.1 103.76 HUMAN 1 8.7593 3.7098 PASPRCGSPTAMEID-p P27987;S269-p PASPRCGSPTAMEID 0.229081970494532 0.032902022095325 -0.373 0.306333333333333 12.2981053010678 20.0007127912389 -0.373 0.306333333333333 0.0589100606548022 0.00999835887219871 -2.38532449984632 3.87547673467906 P27987 ITPKB P27987.S269.p_ITPKB P27987_S269s _1_1_269_269 P27987 P27987|P27987-2 Inositol-trisphosphate 3-kinase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10762.10762.2 13.23 9.73 2.557 2 1 1 0 951.9643 1822.9556 S269s TMT10 267 (R) CGsPTAMEIDKR (G) CGS(0.99)PT(0.0)AMEIDKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ITPKB 103230.2 5 8 424.1 319.61 HUMAN 1 -12.2981 20.0007 PASPSPASPGPASPS-p Q9Y3L3;S646-p PASPSPASPGPASPS 0.477468266229797 0.394719327311917 0.144666666666667 0.117333333333333 5.90674060486054 5.36621282466762 0.144666666666667 0.117333333333333 0.256640941308622 0.290655615192354 1.26793234737145 1.17051369694046 Q9Y3L3 SH3BP1 Q9Y3L3.S646.p_SH3BP1 Q9Y3L3_S646s_1_1_646_646 Q9Y3L3 Q9Y3L3 SH3 domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25474.25474.5 24.23 24.23 1.101 11 1 1 0 1165.6045 5743.0041 S646s N659n TMT10 637 (R) RSPASPSPAsPGPASPSPVSLSnPAQVDLGAATAEGGAPEAISGVPTPPAIPPQPRPR (S) RS(0.0)PAS(0.0)PS(0.0)PAS(0.99)PGPAS(0.0)PS(0.0)PVS(0.0)LS(0.0)N(1.0)PAQVDLGAAT(0.0)AEGGAPEAIS(0.0)GVPT(0.0)PPAIPPQPRPR s:Phosphorylated S,n:Deamidated SH3BP1 76054.2 4 7 1166.1 170.58 HUMAN 1 5.9067 5.3662 PASPTPPSPPPPPSP-p O75864;S591-p PASPTPPSPPPPPSP 0.390987808375823 0.0799250699897991 0.127333333333333 0.192 7.53397143362277 14.5638616944804 0.127333333333333 0.192 0.176442359430584 0.0349634138282137 1.55419565043484 2.79528689910391 O75864 PPP1R37 O75864.S591.p_PPP1R37 O75864_S591s _1_1_591_591 O75864 O75864|O75864-2 Protein phosphatase 1 regulatory subunit 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22240.22240.3 11.89 11.89 1.116 7 1 1 0 1153.9213 3379.7735 S591s TMT10 581 (R) AEPPASPTPPsPPPPPSPPASPSLPPAGAIDTR (D) AEPPAS(0.0)PT(0.0)PPS(0.99)PPPPPS(0.0)PPAS(0.0)PS(0.0)LPPAGAIDT(0.0)R s:Phosphorylated S PPP1R37 75450.7 3 5 1340.1 151.86 HUMAN 1 7.534 14.5639 PASRALATPPKLHTC-p Q96JY6-5;T529-p PASRALATPPKLHTC 0.540250599713126 0.529521161134576 -0.087 0.0596666666666667 4.93470757397589 3.7128206003216 -0.087 0.0596666666666667 0.321017894977607 0.425322090654149 -1.09207922204374 0.861682492012334 Q96JY6 PDLIM2 Q96JY6.5.T529.p_PDLIM2 Q96JY6-5_T529t _1_1_529_529 Q96JY6-5 Q96JY6-5|Q96JY6-3|A0A087WVI1|B3KPU0|E5RGS7 Isoform 5 of PDZ and LIM domain protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12953.13166.4 13.57 11.18 4.495 2 1 1 0 559.0659 2153.272 T529t TMT10 526 (R) ALAtPPKLHTCEK (C) ALAT(0.99)PPKLHT(0.0)CEK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T PDLIM2 63315 4 11 1306.1 155.86 HUMAN 1 -4.9347 3.7128 PASSRAQTLPTSVVT-p A0A087WUZ3;T2330-p PASSRAQTLPTSVVT 0.0601373664655506 0.0340474106016949 -0.462 0.302666666666667 26.7069647859162 19.7834168618661 -0.462 0.302666666666667 0.00213453618488327 0.0105113455619415 -5.48949962263797 3.82908909150009 A0A087WUZ3 NotFound A0A087WUZ3.T2330.p_NotFound A0A087WUZ3_T2330t _1_1_2330_2330 A0A087WUZ3 A0A087WUZ3|Q01082 Spectrin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20027.20027.4 16.36 16.36 2.83 8 1 1 0 650.1057 2517.4288 T2330t TMT10 2328 (R) AQtLPTSVVTITSESSPGKR (E) AQT(0.99)LPT(0.0)S(0.0)VVT(0.0)IT(0.0)S(0.0)ES(0.0)S(0.0)PGKR K:TMT10,t:Phosphorylated T SPTBN1 275623.3 1 19 233.1 420.49 HUMAN 1 -26.707 19.7834 PASSRSQTPERPAKK-p A8CG34;T424-p PASSRSQTPERPAKK 0.339080085155691 0.0434891171811701 -0.168 -0.267666666666667 8.73862579720475 18.243772231436 -0.168 -0.267666666666667 0.1337018511541 0.0149838279222151 -1.7631186934282 -3.50884738166536 A8CG34 NotFound A8CG34.T424.p_NotFound A8CG34_T424t _1_1_424_424 A8CG34 Q96HA1|A8CG34|A0A075B7F8|Q96HA1-3|A8CG34-2|A0A087WY75|Q96HA1-2|A6NF01 Nuclear envelope pore membrane protein POM 121C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4285.4285.3 11.15 7.56 2.19 2 1 1 0 517.9481 1471.8633 T424t TMT10 422 (R) SQtPERPAK (K) S(0.0)QT(0.99)PERPAK K:TMT10,t:Phosphorylated T POM121C 125455.9 12 23 133.2 532.02 HUMAN 1 -8.7386 -18.2438 PASTPTYSPAPTQPA-p Q6P1N0;S208-p PASTPTYSPAPTQPA 0.77293343908683 0.310347129753327 -0.0766666666666667 2.36733333333333 2.13795746758742 6.71404020036051 -0.0766666666666667 2.36733333333333 0.61122942491386 0.213106148442711 -0.539141499862175 1.49329654040276 Q6P1N0 CC2D1A Q6P1N0.S208.p_CC2D1A Q6P1N0_S208s _1_1_208_208 Q6P1N0 Q6P1N0|Q6P1N0-2 Coiled-coil and C2 domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10356.10356.3 17.69 17.69 1.539 6 1 1 0 702.3472 2025.0603 S208s TMT10 200 (K) GPASTPTYsPAPTQPAPR (I) GPAS(0.0)T(0.0)PT(0.0)Y(0.0)S(0.99)PAPT(0.0)QPAPR s:Phosphorylated S CC2D1A 104460 2 2 1492.1 137.02 HUMAN 1 -2.138 6.714 PASVADDTPPPERRN-p Q7LFL8;T53-p PASVADDTPPPERRN 0.100718023880825 0.248302605226538 0.357666666666667 -0.117333333333333 21.089185803372 7.97022749711502 0.357666666666667 -0.117333333333333 0.00778182427662007 0.159579555225495 4.11669895175776 -1.62948097763588 Q7LFL8 CXXC5 Q7LFL8.T53.p_CXXC5 Q7LFL8_T53t _1_1_53_53 Q7LFL8 Q7LFL8 CXXC-type zinc finger protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12575.12789.4 16.58 16.58 1.233 3 1 1 0 615.0655 2377.2673 T53t TMT10 38 (K) SAVVAAAAPASVADDtPPPERR (N) S(0.0)AVVAAAAPAS(0.0)VADDT(0.99)PPPERR t:Phosphorylated T CXXC5 33433.2 4 1 4321.1 33.69 HUMAN 1 21.0892 -7.9702 PASWSSRSAVDLSCS-p Q9Y446-2;S138-p PASWSSRSAVDLSCS 0.178006212061543 0.265955571229307 0.412333333333333 0.142666666666667 14.8267844349917 7.5729700598404 0.412333333333333 0.142666666666667 0.0329095206470305 0.174865040985968 2.84602714149745 1.56051471156414 Q9Y446 PKP3 Q9Y446.2.S138.p_PKP3 Q9Y446-2_S138s _1_1_138_138 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4537.4537.2 15.55 8.12 12.443 3 1 1 0 615.7692 1150.5633 S138s Hydrogen 138 (R) sAVDLSCSRR (L) S(0.99)AVDLS(0.0)CS(0.0)RR C:Carbamidomethylation,s:Phosphorylated S PKP3 89109.7 3 5 454.1 307.47 HUMAN 1 14.8268 7.573 PATAADESPASEGEE-p W4VSR2;S178-p PATAADESPASEGEE 0.957246455101486 0.0316359987498557 0.00933333333333332 0.382333333333333 0.370049765373266 20.2612769139659 0.00933333333333333 0.382333333333333 0.918322073461873 0.00941612702563396 0.107425508526763 3.93150854521875 W4VSR2 MPND W4VSR2.S178.p_MPND W4VSR2_S178sS181s_2_2_178_181 W4VSR2 W4VSR2|Q8N594|Q8N594-2|M0R044 MPN domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23910.23910.4 14.16 14.16 2.365 5 2 2 0 1293.0823 4993.3672 S178s S181s M190m TMT10 165 (R) LHQLHTPATAADEsPAsEGEEEELLmEEEEEDVLAGVSAEDK (S) LHQLHT(0.0)PAT(0.0)AADES(0.99)PAS(0.99)EGEEEELLM(1.0)EEEEEDVLAGVS(0.0)AEDK K:TMT10,s:Phosphorylated S,m:Oxidized methionine MPND 54672.5 3 5 3092.1 60.89 HUMAN 1 0.37 20.2613 PATGVLPSPQGKSTS-p Q5SRE5;S1717-p PATGVLPSPQGKSTS 0.843942307663143 0.0398548575294297 -0.03 -0.29 1.42573943824598 18.7688933930569 -0.03 -0.29 0.720155125784662 0.0132773272845222 -0.377506397135749 -3.61645941898962 Q5SRE5 NUP188 Q5SRE5.S1717.p_NUP188 Q5SRE5_S1717s _1_1_1717_1717 Q5SRE5 Q5SRE5|Q5SRE5-2 Nucleoporin NUP188 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12859.12859.4 16.46 16.46 16.462 4 1 1 0 562.0581 2165.2443 S1717s TMT10 1704 (R) RGAPSSPATGVLPsPQGK (S) RGAPS(0.0)S(0.0)PAT(0.0)GVLPS(0.99)PQGK K:TMT10,s:Phosphorylated S NUP188 198492.8 7 4 2552.1 78.83 HUMAN 1 -1.4257 -18.7689 PATLTPRSPHASRTP-p Q96AP0;S416-p PATLTPRSPHASRTP 0.287471650649086 0.0154604915090575 0.173333333333333 -0.375333333333333 10.2095459056851 25.0420576684695 0.173333333333333 -0.375333333333333 0.0952895792722463 0.00313180153872081 2.01814040868854 -5.04812207057473 Q96AP0 ACD Q96AP0.S416.p_ACD Q96AP0_S416s _1_1_416_416 Q96AP0 Q96AP0|Q96AP0-2 Adrenocortical dysplasia protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10221.10221.3 14.14 11.05 14.069 9 1 1 0 958.1365 2792.4311 S416s TMT10 397 (R) SSSQPSPAICSAPATLTPRsPHASR (T) S(0.0)S(0.0)S(0.0)QPS(0.0)PAICS(0.0)APAT(0.0)LT(0.0)PRS(0.99)PHAS(0.0)R C:Carbamidomethylation,s:Phosphorylated S ACD 58702.3 1 2 3763.1 43.67 HUMAN 1 10.2095 -25.0421 PATPRCPSPEPPVTQ-p O43593;S316-p PATPRCPSPEPPVTQ 0.744000442558004 0.259249933698932 0.057 0.109333333333333 2.44115755222332 7.72308491846767 0.057 0.109333333333333 0.570012323084969 0.168924058925639 0.604425513247196 1.58659860441905 O43593 HR O43593.S316.p_HR O43593_S316s _1_1_316_316 O43593 O43593 Lysine-specific demethylase hairless HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8209.8209.2 9.12 9.12 3.958 2 1 1 0 788.8735 1496.7729 S316s TMT10 314 (R) CPsPEPPVTQR (G) CPS(0.99)PEPPVT(0.0)QR C:Carbamidomethylation,s:Phosphorylated S HR 130059.7 2 2 3078.1 61.36 HUMAN 1 2.4412 7.7231 PATPRRMSDPPLSTM-p P78314-4;S335-p PATPRRMSDPPLSTM 0.910892402066026 0.944232842957325 -0.021 -0.00966666666666667 0.796090014860471 0.357918634357573 -0.021 -0.00966666666666667 0.832512951334565 0.920890804912047 -0.221917443199261 -0.104022735070124 P78314 SH3BP2 P78314.4.S335.p_SH3BP2 P78314-4_S335s _1_1_335_335 P78314-4 P78314-4|P78314-3 Isoform 4 of SH3 domain-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18679.18679.3 18.1 16.48 6.225 4 1 1 0 712.6896 2056.0881 S335s TMT10 333 (R) RMsDPPLSTMPTAPGLR (K) RMS(0.99)DPPLS(0.0)T(0.0)MPT(0.0)APGLR s:Phosphorylated S SH3BP2 68698.6 4 2 1751.1 117.58 HUMAN 1 -0.7961 -0.3579 PATQKAKSEENTKEE-p P50502;S51-p PATQKAKSEENTKEE 0.901977957773678 0.444852698709049 -0.028 -0.0773333333333333 0.880947962118112 4.68433953690635 -0.0233358309344566 -0.0773333333333333 0.816404150195283 0.340068218510405 -0.243742962594103 -1.04568043562648 P50502 ST13 P50502.S51.p_ST13 P50502_S51s _1_1_51_51 P50502 P50502|Q8NFI4|Q8IZP2|Q3KNR6 Hsc70-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6492.6492.4 9.59 9.59 6.831 3 1 1 0 737.1607 2865.6542 S51s TMT10 49 (K) AKsEENTKEEKPDSK (K) AKS(0.99)EENT(0.0)KEEKPDS(0.0)K K:TMT10,s:Phosphorylated S ST13 41502.2 2 1 2700.1 73.52 HUMAN 1 -0.8809 -4.6843 PATRDKDSPPRVLKD-p Q6UB99;S1509-p PATRDKDSPPRVLKD 0.74221855859011 0.0293787526997934 0.0453333333333333 -0.341333333333333 2.45818094640086 20.7360156120855 0.0453333333333333 -0.341333333333333 0.567782372716402 0.00844108821171808 0.608037870826331 -4.03476395980304 Q6UB99 ANKRD11 Q6UB99.S1509.p_ANKRD11 Q6UB99_S1509s _1_1_1509_1509 Q6UB99 Q6UB99 Ankyrin repeat domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10680.10892.4 11.05 11.05 99 1 1 1 0 481.2825 1842.1416 S1509s TMT10 1506 (R) DKDsPPRVLK (D) DKDS(1.0)PPRVLK K:TMT10,s:Phosphorylated S ANKRD11 299790.8 3 17 340.1 353.72 HUMAN 1 2.4582 -20.736 PATSCELTPSNLNNK-p Q6P4F7;T567-p PATSCELTPSNLNNK 0.93560338988576 0.0531997394702416 0.0183333333333333 -0.226333333333333 0.566286259793799 16.993308627582 0.0183333333333334 -0.226333333333333 0.877751083071087 0.0199833887576845 0.161243235079039 -3.25883502024323 Q6P4F7 ARHGAP11A Q6P4F7.T567.p_ARHGAP11A Q6P4F7_T567t _1_1_567_567 Q6P4F7 Q6P4F7|Q6P4F7-3 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14807.14807.3 18.99 18.99 5.183 5 1 1 0 757.7088 2191.1429 T567t TMT10 559 (K) SPATSCELtPSNLNNK (H) S(0.0)PAT(0.0)S(0.0)CELT(0.99)PS(0.0)NLNNK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ARHGAP11A 114948.2 1 6 414.1 321.53 HUMAN 1 0.5663 -16.9933 PATVNNSSDTESIPS-p Q9Y618;S746-p PATVNNSSDTESIPS 0.491091158286831 0.400440334834717 -0.0913333333333333 0.093 5.68692107694273 5.28534894210102 -0.0913333333333333 0.093 0.269965266816217 0.296118203407469 -1.22858386535241 1.15585706215877 Q9Y618 NCOR2 Q9Y618.S746.p_NCOR2 Q9Y618_S745sS746sS753s_3_3_745_753 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14170.14170.4 13.58 13.58 0 8 3 3 0 861.3655 3201.537 N744n S745s S746s S753s TMT10 734 (R) GECSGPATVNnssDTESIPsPHTEAAK (D) GECS(0.0)GPAT(0.0)VN(0.50)N(0.50)S(0.99)S(0.99)DT(0.0)ES(0.0)IPS(0.99)PHT(0.0)EAAK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S NCOR2 275540.8 2 50 16.1 1053.89 HUMAN 1 -5.6869 5.2853 PAVEAAVTPPAPPQP-p Q02086-2;T48-p PAVEAAVTPPAPPQP 0.339651694229 0.0514738034099129 0.224333333333333 0.243333333333333 8.725356834364 17.1966184792486 0.224333333333333 0.243333333333333 0.134110973973826 0.0190694493301862 1.76082178849778 3.29891119463798 Q02086 SP2 Q02086.2.T48.p_SP2 Q02086-2_T48t _1_1_48_48 Q02086-2 Q02086|Q02086-2|Q9BRW5 Isoform 2 of Transcription factor Sp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21319.21319.3 19.93 19.93 8.345 2 1 1 0 791.4221 2292.2913 T48t TMT10 38 (K) IGPPAVEAAVtPPAPPQPTPR (K) IGPPAVEAAVT(0.99)PPAPPQPT(0.0)PR t:Phosphorylated T SP2 64779.7 1 4 950.1 196.36 HUMAN 1 8.7254 17.1966 PAVGSGLSPLLPLAM-p O60826;S54-p PAVGSGLSPLLPLAM 0.921455118537035 0.466641716626222 -0.0306666666666667 0.206333333333333 0.697981634613581 4.4139943458356 -0.0306666666666667 0.206333333333333 0.851533692967515 0.361909985061646 -0.19630447908512 0.995301302788992 O60826 CCDC22 O60826.S54.p_CCDC22 O60826_S54s _1_1_54_54 O60826 O60826 Coiled-coil domain-containing protein 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36979.36979.3 25.09 25.7 2.721 3 1 1 0 791.4357 2292.3311 S54s TMT10 44 (R) VINPAVGSGLsPLLPLAMSAR (F) VINPAVGS(0.0)GLS(0.99)PLLPLAMS(0.0)AR s:Phosphorylated S CCDC22 71096.6 1 1 3114.1 60.34 HUMAN 1 -0.698 4.414 PAVLPAASPCSSPKT-p O94806;S27-p PAVLPAASPCSSPKT 0.663377338382 0.203861111901199 0.0626666666666667 -0.133 3.33628306896876 9.08777168492343 0.0626666666666667 -0.133 0.463843732882083 0.123373768748897 0.787925363213686 -1.82289504680851 O94806 PRKD3 O94806.S27.p_PRKD3 O94806_S27s _1_1_27_27 O94806 O94806|O94806-2 Serine/threonine-protein kinase D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30045.30045.3 21.83 17.47 3.624 5 1 1 0 867.8094 2521.4464 S27s TMT10 13 (K) SVLPTAIPAVLPAAsPCSSPK (T) S(0.0)VLPT(0.0)AIPAVLPAAS(0.99)PCS(0.0)S(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRKD3 101838.2 2 8 1565.1 131.21 HUMAN 1 3.3363 -9.0878 PAVSDPRSPPSQKSP-p O14647;S1789-p PAVSDPRSPPSQKSP 0.616234882150541 0.305515002866125 -0.0896666666666667 0.11 3.90138445599854 6.80250662615124 -0.0896666666666667 0.11 0.407250432686206 0.208809059555968 -0.898231623713129 1.42601391197431 O14647 CHD2 O14647.S1789.p_CHD2 O14647_S1789s _1_1_1789_1789 O14647 O14647 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17488.17488.4 15.91 14.28 2.257 4 1 1 0 877.2303 3425.9512 S1789s TMT10 1770 (K) LGEYKQPLPPLHPAVSDPRsPPSQK (S) LGEY(0.0)KQPLPPLHPAVS(0.0)DPRS(0.99)PPS(0.0)QK K:TMT10,s:Phosphorylated S CHD2 212309.6 1 7 482.1 298.11 HUMAN 1 -3.9014 6.8025 PAVYKPLSQEELQRI-p O95628-9;S71-p PAVYKPLSQEELQRI 0.664070510321735 0.329887245035417 0.145 0.104666666666667 3.32620647671684 6.37785319644798 0.145 0.104666666666667 0.464921202403595 0.230257974686172 0.78592429061198 1.35126638642304 O95628 CNOT4 O95628.9.S71.p_CNOT4 O95628-9_S71s _1_1_71_71 O95628-9 O95628-6|O95628-10|O95628-9|O95628-7|O95628-4|O95628-8 Isoform 9 of CCR4-NOT transcription complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17116.17116.4 16.12 12.03 6.301 3 1 1 0 789.4284 3074.7129 S71s TMT10 58 (R) KPYPEDPAVYKPLsQEELQR (I) KPY(0.0)PEDPAVY(0.0)KPLS(0.99)QEELQR K:TMT10,s:Phosphorylated S CNOT4 78491.8 1 4 1032.1 185.91 HUMAN 1 3.3262 6.3779 PAYAKQLSPATQLAI-p Q9H972;S224-p PAYAKQLSPATQLAI 0.363644147907517 0.00351616489422878 -0.123 0.764333333333333 8.15705948245992 36.67644605695 -0.123 0.764333333333334 0.15286006916452 0.000214958881820479 -1.66239575496271 8.73234812653678 Q9H972 C14orf93 Q9H972.S224.p_C14orf93 Q9H972_S224s _1_1_224_224 Q9H972 Q9H972|Q9H972-2|A0A0C4DFZ6 Uncharacterized protein C14orf93 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16841.16841.3 11.16 11.16 1.696 2 1 1 0 545.632 1554.9165 S224s TMT10 222 (K) QLsPATQLAIQR (A) QLS(0.99)PAT(0.0)QLAIQR s:Phosphorylated S C14orf93 59380.4 3 1 2148.1 95.78 HUMAN 1 -8.1571 36.6764 PAYEPLDSLDRRRDG-p Q96T37;S613-p PAYEPLDSLDRRRDG 0.800325882980012 0.782186498470883 0.07 -0.0276666666666667 1.86289204391202 1.47695763522798 0.07 -0.0276666666666667 0.651194607615446 0.711711914876499 0.478219763542675 -0.389539561578218 Q96T37 RBM15 Q96T37.S613.p_RBM15 Q96T37_S613s _1_1_613_613 Q96T37 Q96T37|Q96T37-3 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14810.14810.3 7.57 7.57 1.366 5 1 1 0 809.7457 2347.2567 S613s TMT10 600 (R) TAATSVPAYEPLDsLDRRR (D) T(0.0)AAT(0.0)S(0.0)VPAY(0.0)EPLDS(0.99)LDRRR s:Phosphorylated S RBM15 107414.9 1 17 55.1 724.11 HUMAN 1 1.8629 -1.477 PAYERGLSLDSFLRA-p Q8NC74;S262-p PAYERGLSLDSFLRA 0.13319097235441 0.0016237919479163 0.405666666666667 0.989 18.0391527993519 44.4634181817099 0.405666666666667 0.989 0.0157066917298768 3.57814702664425e-05 3.4701933865945 12.3333736737267 Q8NC74 RBBP8NL Q8NC74.S262.p_RBBP8NL Q8NC74_S262s _1_1_262_262 Q8NC74 Q8NC74 RBBP8 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30233.30233.2 12.2 6.94 1.517 2 1 1 0 658.8445 1236.715 S262s TMT10 260 (R) GLsLDSFLR (A) GLS(0.99)LDS(0.0)FLR s:Phosphorylated S RBBP8NL 71886.7 3 8 565.1 270.89 HUMAN 1 18.0392 44.4634 PAYRPNLSPPAEAGL-p Q8N1G0;S519-p PAYRPNLSPPAEAGL 0.420320976430283 0.4572119523502 0.114 0.0843333333333334 6.94616379230346 4.5311786290485 0.114 0.0843333333333334 0.202015001362963 0.352275254309859 1.45158614047208 1.01720799351708 Q8N1G0 ZNF687 Q8N1G0.S519.p_ZNF687 Q8N1G0_S519s _1_1_519_519 Q8N1G0 Q8N1G0|Q8N1G0-2|F8WCX2 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27510.27926.4 23.38 21.73 11.368 4 1 1 0 765.1596 2977.6461 S519s TMT10 509 (K) NLLPAYRPNLsPPAEAGLALPPTGYR (C) NLLPAY(0.0)RPNLS(0.99)PPAEAGLALPPT(0.0)GY(0.0)R s:Phosphorylated S ZNF687 131979.7 4 14 156.1 501.88 HUMAN 1 6.9462 4.5312 PAYSRALSRQLSSGV-p P04792;S78-p PAYSRALSRQLSSGV 0.561099518094358 0.671343277756076 0.187666666666667 -0.113333333333333 4.62083255777968 2.36563703609354 0.187666666666667 -0.113333333333333 0.345077580410099 0.580011088527035 1.03409163285983 -0.588261229418479 P04792 HSPB1 P04792.S78.p_HSPB1 P04792_S78s _1_1_78_78 P04792 P04792|F8WE04 Heat shock protein beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14329.14329.3 11.11 7.69 3.56 4 1 1 0 604.6567 1731.9915 S78s TMT10 76 (R) ALsRQLSSGVSEIR (H) ALS(0.99)RQLS(0.0)S(0.0)GVS(0.0)EIR s:Phosphorylated S HSPB1 22839.1 1 6 357.1 346.69 HUMAN 1 4.6208 -2.3656 PAYWRPNSQILSCNK-p G3V5N8;S599-p PAYWRPNSQILSCNK 0.0242845100636711 0.0453960353890061 -0.679333333333333 -0.264 37.3778199438314 17.9724639787442 -0.679333333333333 -0.264 0.00018290181098221 0.0159497397869386 -9.03132135096297 -3.45387253765136 G3V5N8 NotFound G3V5N8.S599.p_NotFound G3V5N8_S599s _1_1_599_599 G3V5N8 G3V5N8|Q9HBF4|Q9HBF4-3|Q9HBF4-2 Zinc finger FYVE domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32595.32595.4 22.72 22.72 2.306 6 1 1 0 890.1971 3477.8353 S599s TMT10 581 (K) AVTSWLTDQIAPAYWRPNsQILSCNK (C) AVT(0.0)S(0.0)WLT(0.0)DQIAPAY(0.0)WRPNS(0.99)QILS(0.0)CNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZFYVE1 90818 5 4 3343.1 53.29 HUMAN 1 -37.3778 -17.9725 PCCLRIPSKDPLEET-p Q63HR2-4;S1257-p PCCLRIPSKDPLEET 0.570428718485616 0.420518020845712 0.0796666666666667 0.142 4.48584141710213 5.00786780382278 0.0796666666666667 0.142 0.355972016108887 0.315655397311337 1.00893195823855 1.1052760423958 Q63HR2 TNS2 Q63HR2.4.S1257.p_TNS2 Q63HR2-4_S1257s _1_1_1257_1257 Q63HR2-4 Q63HR2-4|Q63HR2-6|F8VV64|Q63HR2-2|Q63HR2-5 Isoform 4 of Tensin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29658.29658.4 13.74 13.74 2.661 5 1 1 0 858.4501 3350.7918 S1257s TMT10 1255 (R) IPsKDPLEETPEAPVPTNMSTAADLLR (Q) IPS(0.99)KDPLEET(0.0)PEAPVPT(0.0)NMS(0.0)T(0.0)AADLLR K:TMT10,s:Phosphorylated S TNS2 155500.6 1 14 453.1 308.04 HUMAN 1 4.4858 5.0079 PCFYRGDSGEQVGQV-p Q96NY8;S58-p PCFYRGDSGEQVGQV 0.654253083415848 0.783361699257239 0.072 0.027 3.45354848144031 1.46805448853124 0.072 0.027 0.451486898109538 0.713172438842705 0.811119185713892 0.387446552779333 Q96NY8 PVRL4 Q96NY8.S58.p_PVRL4 Q96NY8_S58s _1_1_58_58 Q96NY8 Q96NY8 Nectin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23213.23213.3 15.35 9.73 14.401 2 1 1 0 869.0822 2525.2557 S58s TMT10 50 (K) LPCFYRGDsGEQVGQVAWAR (V) LPCFY(0.0)RGDS(0.99)GEQVGQVAWAR C:Carbamidomethylation,s:Phosphorylated S NECTIN4 55966.8 2 1 1903.1 108.23 HUMAN 1 3.4535 1.4681 PCGEGSKTWDRFQMR-p P60866-2;T76-p PCGEGSKTWDRFQMR 0.204124866753728 0.110893158129549 -0.369 0.236333333333333 13.3596312507841 12.6083175941554 -0.369 0.236333333333333 0.046135674561206 0.0548489402126466 -2.57607701246077 2.43943106682968 P60866 RPS20 P60866.2.T76.p_RPS20 P60866-2_T76t _1_1_76_76 P60866-2 P60866-2|G3XAN0 Isoform 2 of 40S ribosomal protein S20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14824.14824.3 9.66 9.66 99 1 1 1 0 483.5616 1368.7044 T76t TMT10 76 (K) tWDRFQMR (I) T(1.0)WDRFQMR t:Phosphorylated T RPS20 16176.5 1 3 2861.1 67.94 HUMAN 1 -13.3596 12.6083 PCHRNDMTPKSKLGL-p Q8IU60;T213-p PCHRNDMTPKSKLGL 0.847573525627325 0.0609262792027162 -0.0516666666666667 -1.18733333333333 1.39188265304339 16.1880214047437 -0.0516666666666666 -1.18733333333333 0.725791260980556 0.0240545844935773 -0.369481643417828 -3.10215212682076 Q8IU60 DCP2 Q8IU60.T213.p_DCP2 Q8IU60_T213t _1_1_213_213 Q8IU60 Q8IU60|Q8IU60-2 m7GpppN-mRNA hydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7238.7238.4 10.59 10.59 99 1 1 1 0 477.4913 1826.977 T213t TMT10 205 (K) LPCHRNDMtPK (S) LPCHRNDMT(1.0)PK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T DCP2 49026.8 1 1 1279.1 158.9 HUMAN 1 -1.3919 -16.188 PCKIVEMSTSKTGKH-p I3L504;S44-p PCKIVEMSTSKTGKH 0.710375901939849 0.0653070790453714 -0.0533333333333334 -0.26 2.79310413036899 15.7685991716377 -0.0533333333333334 -0.26 0.525641428602063 0.026493545571363 -0.678066731719471 -3.02178690325125 I3L504 NotFound I3L504.S44.p_NotFound I3L504_S44s _1_1_44_44 I3L504 I3L504|P63241-2|Q9GZV4|C9J7B5|F8WCJ1 Eukaryotic translation initiation factor 5A-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16478.16478.2 11.14 6.11 1.138 3 1 1 0 716.8805 1352.786 S44s TMT10 40 (K) IVEMsTSK (T) IVEMS(0.99)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S EIF5A 20959.8 4 1 4910.1 25.17 HUMAN 1 -2.7931 -15.7686 PCLFVGTSLGMVLII-p Q9Y2K9;S858-p PCLFVGTSLGMVLII 0.663480609588847 0.211983976313256 -0.0583333333333333 0.221666666666667 3.33264808668323 8.86281463882498 -0.0583333333333333 0.221666666666667 0.464232125925286 0.12993272182225 -0.787203654782788 1.78398460983719 Q9Y2K9 STXBP5L Q9Y2K9.S858.p_STXBP5L Q9Y2K9_T857tS858sS866s_3_3_857_866 Q9Y2K9 Q9Y2K9|E9PFI2|C9JCY1|C9K0E4|C9JPK3 Syntaxin-binding protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5065.5065.5 9.12 3.59 6.871 6 3 3 0 814.9919 3831.0597 T857t S858s S866s Hydrogen 844 (R) KNDSTISPCLFVGtsLGMVLIIsLNLPLADEQR (F) KNDS(0.0)T(0.0)IS(0.0)PCLFVGT(0.99)S(0.99)LGMVLIIS(0.99)LNLPLADEQR K:TMT10-Lys-Only,C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S STXBP5L 133652.9 1 3 4722.1 27.46 HUMAN 1 -3.3326 8.8628 PCLPVKLSPPLPPKK-p Q9C0D0;S237-p PCLPVKLSPPLPPKK 0.278130997062813 0.00508786135659444 -0.345333333333333 0.610666666666667 10.5155293720578 33.3934473945175 -0.345333333333333 0.610666666666667 0.0888069720753422 0.000457778361686179 -2.07143545678884 7.52109083837521 Q9C0D0 PHACTR1 Q9C0D0.S237.p_PHACTR1 Q9C0D0_S237s _1_1_237_237 Q9C0D0 Q9C0D0|Q9C0D0-2 Phosphatase and actin regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27151.27151.5 15.6 15.6 99 1 1 1 0 556.9471 2700.7384 S237s TMT10 229 (K) LPCLPVKLsPPLPPKK (V) LPCLPVKLS(1.0)PPLPPKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PHACTR1 66763.3 8 8 638.1 255.38 HUMAN 1 -10.5155 33.3934 PCNVEGISPELEKVF-p Q86VQ1;S303-p PCNVEGISPELEKVF 0.668315561863661 0.675484302548125 -0.0696666666666667 0.0493333333333334 3.2734572430539 2.32869226226452 -0.0696666666666667 0.0493333333333334 0.470602549552029 0.584966201328559 -0.775427748567971 0.580351063598867 Q86VQ1 GLCCI1 Q86VQ1.S303.p_GLCCI1 Q86VQ1_S303s _1_1_303_303 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17467.17467.2 17.46 17.46 99 1 1 1 0 940.4595 1799.9411 S303s Hydrogen 295 (R) VPCNVEGIsPELEK (V) VPCNVEGIS(1.0)PELEK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S GLCCI1 58707.2 10 11 307.1 373.49 HUMAN 1 -3.2735 2.3287 PCNYDWDSDDDAEVE-p Q9H213;S199-p PCNYDWDSDDDAEVE 0.332256356782789 0.787520307114838 0.196666666666667 0.0356666666666667 8.93782922952259 1.44034824036075 0.196666666666667 0.0356666666666667 0.127707698138854 0.717736737023758 1.79760068931295 0.380918204893624 Q9H213 MAGEH1 Q9H213.S199.p_MAGEH1 Q9H213_S199s _1_1_199_199 Q9H213 Q9H213 Melanoma-associated antigen H1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32833.33153.3 16.76 16.76 5.872 3 1 1 0 1074.7749 3142.3534 S199s TMT10 190 (K) DWPCNYDWDsDDDAEVEAILNSGAR (G) DWPCNY(0.0)DWDS(0.99)DDDAEVEAILNS(0.0)GAR C:Carbamidomethylation,s:Phosphorylated S MAGEH1 24554.2 1 1 5730.1 16.76 HUMAN 1 8.9378 1.4403 PCPQRRDSFSGVKDS-p Q14865;S264-p PCPQRRDSFSGVKDS 0.132838412441473 0.147144465082663 -0.431666666666667 -0.183666666666667 18.089090176937 10.957025445455 -0.431666666666667 -0.183666666666667 0.015527122605699 0.0802227333998039 -3.4803178874979 -2.14761837723158 Q14865 ARID5B Q14865.S264.p_ARID5B Q14865_S264s _1_1_264_264 Q14865 Q14865|Q14865-2|Q14865-3 AT-rich interactive domain-containing protein 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7870.7870.4 11.63 11.63 1.107 4 1 1 0 649.3267 2514.3152 S264s TMT10 262 (R) RDsFSGVKDSNNNSDGK (A) RDS(0.99)FS(0.0)GVKDS(0.0)NNNS(0.0)DGK K:TMT10,s:Phosphorylated S ARID5B 133513.4 4 1 1262.1 160.88 HUMAN 1 -18.0891 -10.957 PCQLCGRSPLGEAPP-p Q96B54;S99-p PCQLCGRSPLGEAPP 0.427161713267137 0.0254020987847127 0.121666666666667 0.309666666666667 6.80492507554077 21.70841252391 0.121666666666667 0.309666666666667 0.208692812727591 0.0067477463291365 1.42682129030972 4.25114848316193 Q96B54 ZNF428 Q96B54.S99.p_ZNF428 Q96B54_S99s _1_1_99_99 Q96B54 Q96B54 Zinc finger protein 428 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14204.14204.4 16.56 16.56 7.727 2 1 1 0 820.6421 3199.5761 S99s TMT10 85 (R) AAQPPAQPCQLCGRsPLGEAPPGTPPCR (L) AAQPPAQPCQLCGRS(0.99)PLGEAPPGT(0.0)PPCR C:Carbamidomethylation,s:Phosphorylated S ZNF428 20879.6 3 1 4492.1 30.76 HUMAN 1 6.8049 21.7084 PCQPDSGSPLPAEEE-p A0A0G2JPP5;S504-p PCQPDSGSPLPAEEE 0.0547639675040143 0.181790329865927 -0.470666666666667 0.174333333333333 27.485332491825 9.73952502756006 -0.470666666666667 0.174333333333333 0.00178429537931271 0.106181167741824 -5.70204709855738 1.93573056418143 A0A0G2JPP5 SCRIB A0A0G2JPP5.S504.p_SCRIB A0A0G2JPP5_S504s _1_1_504_504 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9955.9955.4 12.15 12.15 1.195 3 1 1 0 721.3337 2802.3439 S504s TMT10 492 (R) RSEACPCQPDSGsPLPAEEEK (R) RS(0.0)EACPCQPDS(0.0)GS(0.99)PLPAEEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SCRIB 178690.9 7 10 22.1 1004.81 HUMAN 1 -27.4853 9.7395 PCRIPSASPQTQRKF-p Q13233;S1018-p PCRIPSASPQTQRKF 0.65789465836027 0.315417635740076 0.11 -0.0993333333333333 3.41062842910416 6.62055698628493 0.11 -0.0993333333333333 0.455970931659814 0.217743049717274 0.802649807271259 -1.39405172707069 Q13233 MAP3K1 Q13233.S1018.p_MAP3K1 Q13233_S1018s _1_1_1018_1018 Q13233 Q13233 Mitogen-activated protein kinase kinase kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8428.8428.3 9.51 9.51 1.884 3 1 1 0 465.2392 1313.7375 S1018s TMT10 1014 (R) IPSAsPQTQR (K) IPS(0.0)AS(0.99)PQT(0.0)QR s:Phosphorylated S MAP3K1 166521 5 11 505.1 289.91 HUMAN 1 3.4106 -6.6206 PCRLTIGSNLSIRIA-p P13010;S255-p PCRLTIGSNLSIRIA 0.567960510686736 0.335527282609464 -0.102 0.134 4.52266547368394 6.28639981987115 -0.102 0.134 0.352966470834987 0.235158140847558 -1.01580915620053 1.33509519193445 P13010 XRCC5 P13010.S255.p_XRCC5 P13010_S255s _1_1_255_255 P13010 P13010 X-ray repair cross-complementing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22804.22804.2 8.38 8.38 2.239 3 1 1 0 691.8843 1302.7943 S255s TMT10 251 (R) LTIGsNLSIR (I) LT(0.0)IGS(0.99)NLS(0.0)IR s:Phosphorylated S XRCC5 83273.6 1 4 1948.1 105.79 HUMAN 1 -4.5227 6.2864 PCSPTPRSLQGDAAP-p Q13574-5;S782-p PCSPTPRSLQGDAAP 0.585616421770961 0.267013456497993 0.0866666666666667 0.132333333333333 4.27266383639249 7.55133352400268 0.0866666666666667 0.132333333333333 0.37388119004793 0.175738391714835 0.968903762227024 1.55675251519426 Q13574 DGKZ Q13574.5.S782.p_DGKZ Q13574-5_S782s _1_1_782_782 Q13574-5 Q13574|Q13574-3|Q13574-5|Q13574-7|Q13574-4|Q13574-2|Q13574-6|E9PNL8 Isoform 5 of Diacylglycerol kinase zeta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22826.22826.3 14.15 12.11 99 1 1 1 0 821.4241 2382.2917 S782s TMT10 782 (R) sLQGDAAPPQGEELIEAAK (R) S(1.0)LQGDAAPPQGEELIEAAK K:TMT10,s:Phosphorylated S DGKZ 106119.2 1 5 1861.1 110.66 HUMAN 1 4.2727 7.5513 PCSTRVKTPTSQSYR-p Q9Y2X9;T888-p PCSTRVKTPTSQSYR 0.813432348374679 0.436196095905922 0.0336666666666667 0.149333333333333 1.72292466230933 4.80029089237244 0.0336666666666667 0.149333333333333 0.672523607267664 0.331108942915811 0.446528216582412 1.0671215731436 Q9Y2X9 ZNF281 Q9Y2X9.T888.p_ZNF281 Q9Y2X9_T888t _1_1_888_888 Q9Y2X9 Q9Y2X9|Q9Y2X9-2 Zinc finger protein 281 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4176.4176.3 9.38 9.38 3.473 5 1 1 0 492.5875 1395.7793 T888t Hydrogen 886 (R) VKtPTSQSYR (-) VKT(0.99)PT(0.0)S(0.0)QS(0.0)Y(0.0)R K:TMT10-Lys-Only,t:Phosphorylated T ZNF281 97654.7 2 16 1522.1 134.23 HUMAN 1 1.7229 4.8003 PCTPRRLSLAESFTN-p Q9UPV9;S719-p PCTPRRLSLAESFTN 0.940187067370901 0.338643066759598 0.0123333333333333 -0.210333333333333 0.525649622246456 6.23096811041441 0.0123333333333333 -0.210333333333333 0.886002684535153 0.238178847222579 0.15025868057878 -1.32527945100059 Q9UPV9 TRAK1 Q9UPV9.S719.p_TRAK1 Q9UPV9_S719s _1_1_719_719 Q9UPV9 Q9UPV9|C9JC32|A0A0D9SFL5 Trafficking kinesin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17483.17483.3 7.58 7.58 7.579 4 1 1 0 568.6285 1623.9016 S719s TMT10 717 (R) RLsLAESFTNTR (E) RLS(0.99)LAES(0.0)FT(0.0)NT(0.0)R s:Phosphorylated S TRAK1 107007.7 1 1 7127.1 7.58 HUMAN 1 0.5256 -6.231 PCTSKPATPAPSEKG-p Q12873-3;T1616-p PCTSKPATPAPSEKG 0.019376665224519 0.0141089945588767 -1.26166666666667 -0.426666666666667 40.0637377299811 25.6622180602279 -1.26166666666667 -0.426666666666667 9.85431015145738e-05 0.00271505226352515 -10.183652744728 -5.20675110792638 Q12873 CHD3 Q12873.3.T1616.p_CHD3 Q12873-3_T1616t_1_1_1616_1616 Q12873-3 Q12873-3|Q12873-2 Isoform 3 of Chromodomain-helicase-DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10536.10536.4 16.43 16.43 1.207 11 1 1 0 871.6907 3402.7666 N1607n T1616t TMT10 1596 (K) TSPTTPEASATnSPCTSKPAtPAPSEK (G) T(0.0)S(0.0)PT(0.0)T(0.0)PEAS(0.0)AT(0.0)N(1.0)S(0.0)PCT(0.0)S(0.0)KPAT(0.99)PAPS(0.0)EK C:Carbamidomethylation,K:TMT10,n:Deamidated,t:Phosphorylated T CHD3 234573.2 2 53 49.3 753.68 HUMAN 1 -40.0637 -25.6622 PDAEEANSPDVTAGC-p Q08J23;S751-p PDAEEANSPDVTAGC 0.037176098078678 0.0302859718373368 -0.615 0.307 32.6645806573764 20.5408604362747 -0.615 0.307 0.000541429524281679 0.00882904959509527 -7.28561758150908 3.99213310313936 Q08J23 NSUN2 Q08J23.S751.p_NSUN2 Q08J23_S751s _1_1_751_751 Q08J23 Q08J23|Q08J23-2 tRNA (cytosine(34)-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12207.12416.4 24.04 24.04 1.151 3 1 1 0 831.6192 3243.481 S751s TMT10 738 (R) AGEPNSPDAEEANsPDVTAGCDPAGVHPPR (-) AGEPNS(0.0)PDAEEANS(0.99)PDVT(0.0)AGCDPAGVHPPR C:Carbamidomethylation,s:Phosphorylated S NSUN2 87267.9 2 5 1957.1 105.19 HUMAN 1 -32.6646 20.5409 PDAEEEKSVSGTDVQ-p P49321-3;S246-p PDAEEEKSVSGTDVQ 0.33004884700351 0.0360527683476488 -0.331 0.569333333333333 8.99842359733205 19.4224124955313 -0.331 0.569333333333333 0.125938245964638 0.0114224364489013 -1.80808995296609 3.75269284294739 P49321 NASP P49321.3.S246.p_NASP P49321-3_S246s _1_1_246_246 P49321-3 P49321-3|P49321-4 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13794.13794.5 23.18 18.33 2.398 5 1 1 0 1111.3411 5472.7006 S246s TMT10 217 (K) GGAAPEGPNEAEVTSGKPEQEVPDAEEEKsVSGTDVQEECREK (G) GGAAPEGPNEAEVT(0.0)S(0.0)GKPEQEVPDAEEEKS(0.99)VS(0.0)GT(0.0)DVQEECREK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NASP 86552 3 8 87.1 626.46 HUMAN 1 -8.9984 19.4224 PDAELACSMQYDDQE-p Q9HCC9;S334-p PDAELACSMQYDDQE 0.464216586326026 0.673778438875259 -0.146666666666667 -0.0403333333333333 6.14941333982706 2.34489454381086 -0.146666666666667 -0.0403333333333333 0.242693791220048 0.582787925988738 -1.31113695807113 -0.583823369180297 Q9HCC9 ZFYVE28 Q9HCC9.S334.p_ZFYVE28 Q9HCC9_S334s _1_1_334_334 Q9HCC9 Q9HCC9|Q9HCC9-2|Q9HCC9-3|Q9HCC9-4|Q9HCC9-5 Lateral signaling target protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22502.22502.4 15.71 15.71 2.44 3 1 1 0 838.3914 3270.5659 S334s TMT10 324 (K) AKDPDAELACsMQYDDQELEQLSR (M) AKDPDAELACS(0.99)MQY(0.0)DDQELEQLS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZFYVE28 98314.4 2 1 3666.1 45.72 HUMAN 1 -6.1494 -2.3449 PDCQEKTSPKGVENP-p Q96GX5;S619-p PDCQEKTSPKGVENP 0.622367418688865 0.408269333223645 -0.086 -0.109 3.8270452152086 5.17901932005076 -0.086 -0.109 0.414281441276872 0.303457634422397 -0.883921355446414 -1.13652866931648 Q96GX5 MASTL Q96GX5.S619.p_MASTL Q96GX5_S619s _1_1_619_619 Q96GX5 Q96GX5|Q96GX5-3|Q96GX5-2 Serine/threonine-protein kinase greatwall HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23469.23469.5 16.23 12.88 2.111 6 1 1 0 750.1732 3666.8664 S619s TMT10 596 (K) ESSFEESNIEDPLIVTPDCQEKTsPK (G) ES(0.0)S(0.0)FEES(0.0)NIEDPLIVT(0.0)PDCQEKT(0.0)S(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MASTL 98458.4 9 5 659.1 251.91 HUMAN 1 -3.827 -5.179 PDCRRTISAPVVRPK-p O15151;S367-p PDCRRTISAPVVRPK 0.185360459701097 0.926534966835056 -0.232 -0.00999999999999997 14.3901488092416 0.46834945300581 -0.232 -0.00999999999999997 0.036390256693982 0.897769929369537 -2.7648362649517 -0.134618111627558 O15151 MDM4 O15151.S367.p_MDM4 O15151_S367s _1_1_367_367 O15151 O15151|O15151-5|A0A087WZ58|A0A087WTR9|O15151-4 Protein Mdm4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13811.13811.3 10.45 10.45 1.105 2 1 1 0 535.9883 1525.983 S367s TMT10 365 (R) TIsAPVVRPK (D) T(0.0)IS(0.99)APVVRPK K:TMT10,s:Phosphorylated S MDM4 55890.3 3 3 3165.1 58.89 HUMAN 1 -14.3901 -0.4683 PDDCRPGTPPSDLIE-p Q8NCA9;T37-p PDDCRPGTPPSDLIE 0.981417957088512 0.00384264936759169 0.00566666666666666 0.587 0.16281621079373 35.7515492999067 0.00566666666666666 0.587 0.963204225028697 0.000265977604339188 0.0483072802682683 8.37504209931542 Q8NCA9 ZNF784 Q8NCA9.T37.p_ZNF784 Q8NCA9_T37t _1_1_37_37 Q8NCA9 Q8NCA9 Zinc finger protein 784 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33810.33810.5 21.41 18.65 2.902 3 1 1 0 774.4105 3788.0556 T37t TMT10 20 (R) SQEPLDLVLVPDDCRPGtPPSDLIEIQVVK (V) S(0.0)QEPLDLVLVPDDCRPGT(0.99)PPS(0.0)DLIEIQVVK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ZNF784 35092.5 3 2 4282.1 34.3 HUMAN 1 0.1628 35.7515 PDDDDMASPKLKLSR-p Q86U86;S636-p PDDDDMASPKLKLSR 0.926741605392514 0.00159168462790637 -0.0146666666666667 -0.910333333333333 0.652388687890942 44.9087518172238 -0.0146666666666667 -0.910333333333334 0.86052032230102 3.22942213946649e-05 -0.184256937557024 -12.5760063904484 Q86U86 PBRM1 Q86U86.S636.p_PBRM1 Q86U86_S636s _1_1_636_636 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-9|Q86U86-3|Q86U86-7|Q86U86-4|Q86U86-5|Q86U86-6 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21739.21739.3 19.12 19.12 99 1 1 1 0 870.1231 2528.3885 S636s TMT10 624 (K) ELGPLPDDDDMAsPKLK (L) ELGPLPDDDDMAS(1.0)PKLK K:TMT10,s:Phosphorylated S PBRM1 194199.5 10 11 194.1 462.54 HUMAN 1 -0.6524 -44.9088 PDDDDSCSINSDPEA-p Q92870-4;S410-p PDDDDSCSINSDPEA 0.518408716454452 0.556303042651699 -0.0903333333333333 -0.0683333333333333 5.27215220297532 3.43212508800155 -0.0903333333333333 -0.0683333333333333 0.297019374869397 0.453719548457613 -1.15370573270009 -0.806771596792979 Q92870 APBB2 Q92870.4.S410.p_APBB2 Q92870-4_S410sS413s_2_2_410_413 Q92870-4 Q92870-4|G5E9Y1|Q92870-2 Isoform 4 of Amyloid-beta A4 precursor protein-binding family B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8966.8966.3 14.44 14.44 1.148 3 2 2 0 934.7144 2642.2041 S410s S413s TMT10 399 (R) NAPHPDDDDSCsINsDPEAK (C) NAPHPDDDDS(0.0)CS(0.99)INS(0.99)DPEAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S APBB2 84356.2 4 19 667.1 249.66 HUMAN 1 -5.2722 -3.4321 PDDGVRGSPPEDYRL-p P42696;S28-p PDDGVRGSPPEDYRL 0.527344543785721 0.118504985255556 0.0896666666666667 0.206333333333333 5.14276278209798 12.2128048166418 0.0896666666666667 0.206333333333333 0.306001617258159 0.0600785605053554 1.13015692199919 2.36893132159307 P42696 RBM34 P42696.S28.p_RBM34 P42696_S28s _1_1_28_28 P42696 P42696|P42696-2 RNA-binding protein 34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20359.20359.5 24.2 17.39 5.6 5 1 1 0 766.1741 3746.8684 S28s TMT10 13 (K) RSVQEGENPDDGVRGsPPEDYRLGQVASSLFR (G) RS(0.0)VQEGENPDDGVRGS(0.99)PPEDY(0.0)RLGQVAS(0.0)S(0.0)LFR s:Phosphorylated S RBM34 48678 11 2 1789.1 114.86 HUMAN 1 5.1428 12.2128 PDDRLDRSFLEDTTP-p Q3YEC7-2;S403-p PDDRLDRSFLEDTTP 0.578965315134144 0.0160204569424703 -0.0833333333333333 -0.390333333333333 4.36465246621724 24.7970440962058 -0.0833333333333333 -0.390333333333333 0.366045231281133 0.00331356573324223 -0.98622247571868 -4.98639936378706 Q3YEC7 RABL6 Q3YEC7.2.S403.p_RABL6 Q3YEC7-2_S403s _1_1_403_403 Q3YEC7-2 Q3YEC7-2|F2Z2T0|G3V154 Isoform 2 of Rab-like protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31079.31079.5 14.07 14.07 1.158 8 1 1 0 1134.7585 5589.7863 S403s TMT10 362 (R) LFGTSPATEAAPPPPEPVPAAEGPATVQSVEDFVPDDRLDRsFLEDTTPAR (D) LFGT(0.0)S(0.0)PAT(0.0)EAAPPPPEPVPAAEGPAT(0.0)VQS(0.0)VEDFVPDDRLDRS(0.99)FLEDT(0.0)T(0.0)PAR s:Phosphorylated S RABL6 79919.7 2 2 429.1 317.58 HUMAN 1 -4.3647 -24.797 PDEDGDHSDKEDEQP-p Q96AT1;S50-p PDEDGDHSDKEDEQP 0.739021165125623 0.990322067618878 0.051 0.002 2.49070103704902 0.0639782873598556 0.051 0.00200000000000001 0.563546680921559 0.98537643325564 0.614923747678924 0.0191893315004034 Q96AT1 KIAA1143 Q96AT1.S50.p_KIAA1143 Q96AT1_S50s _1_1_50_50 Q96AT1 Q96AT1 Uncharacterized protein KIAA1143 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18572.18572.4 24.36 24.36 99 1 1 1 0 928.2202 3629.8902 S50s TMT10 38 (R) IQPQPPDEDGDHsDKEDEQPQVVVLK (K) IQPQPPDEDGDHS(1.0)DKEDEQPQVVVLK K:TMT10,s:Phosphorylated S KIAA1143 17465.1 19 1 1951.1 105.34 HUMAN 1 2.4907 0.064 PDEEDEISEELKEKA-p F5H4R6;S143-p PDEEDEISEELKEKA 0.37550402812562 0.0414794358216984 -0.166666666666667 0.276 7.86524133868734 18.528123110764 -0.166666666666667 0.276 0.163484229995074 0.014034200891856 -1.61177458247668 3.56691827716293 F5H4R6 NAP1L1 F5H4R6.S143.p_NAP1L1 F5H4R6_S143s _1_1_143_143 F5H4R6 P55209|F5H4R6|P55209-2|F8W543|F8VV59 Nucleosome assembly protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28350.28350.5 25.37 20.27 8.061 3 1 1 0 928.2492 4557.2474 S143s TMT10 117 (K) RFEIINAIYEPTEEECEWKPDEEDEIsEELK (E) RFEIINAIY(0.0)EPT(0.0)EEECEWKPDEEDEIS(0.99)EELK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NAP1L1 44911.2 3 4 836.1 215.14 HUMAN 1 -7.8652 18.5281 PDEEGRQSPAMRPRS-p Q6P0Q8;S290-p PDEEGRQSPAMRPRS 0.90552186362789 0.0226193350033276 0.0283333333333333 -0.394666666666667 0.848875277372705 22.4728735342654 0.0283333333333333 -0.394666666666667 0.822455619421169 0.00565864757494961 0.235528615759536 -4.42609853081937 Q6P0Q8 MAST2 Q6P0Q8.S290.p_MAST2 Q6P0Q8_S290s _1_1_290_290 Q6P0Q8 Q6P0Q8|Q6P0Q8-2 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7487.7487.4 11.17 11.17 1.243 4 1 1 0 681.3222 2642.2943 S290s TMT10 276 (K) HFSTESVPDEEGRQsPAMRPR (S) HFS(0.0)T(0.0)ES(0.0)VPDEEGRQS(0.99)PAMRPR s:Phosphorylated S MAST2 197687.5 1 42 121.1 549.41 HUMAN 1 0.8489 -22.4729 PDEIDENSMEDIKFS-p Q9Y696;S167-p PDEIDENSMEDIKFS 0.906964673578303 0.0842573703331766 -0.02 0.213666666666667 0.83191925778654 14.2238819150523 -0.02 0.213666666666667 0.825672983045361 0.0378104467228201 -0.231168939963405 2.732445960631 Q9Y696 CLIC4 Q9Y696.S167.p_CLIC4 Q9Y696_S167s_1_1_167_167 Q9Y696 Q9Y696 Chloride intracellular channel protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30698.30698.3 15.56 13.47 3.698 3 1 1 0 1040.1617 3037.4964 N166n S167s TMT10 151 (K) LDEYLNSPLPDEIDEnsMEDIK (F) LDEY(0.0)LN(0.0)S(0.0)PLPDEIDEN(0.99)S(0.99)MEDIK K:TMT10,n:Deamidated,s:Phosphorylated S CLIC4 28999.8 3 2 4395.1 32.08 HUMAN 1 -0.8319 14.2239 PDGPTGSSEEEEEFL-p Q12888-2;S1764-p PDGPTGSSEEEEEFL 0.484351536489608 0.0145535069518938 0.0943333333333333 0.385333333333333 5.79918895541113 25.4401010319115 0.0943333333333333 0.385333333333333 0.263075924009606 0.00285752406671252 1.24870691775743 5.14953615370841 Q12888 TP53BP1 Q12888.2.S1764.p_TP53BP1 Q12888-2_S1763sS1764s_2_2_1763_1764 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31377.31989.4 21.95 19.37 2.172 4 2 2 0 906.6924 3463.8088 S1763s S1764s TMT10 1754 (R) SKLPDGPTGssEEEEEFLEIPPFNK (Q) S(0.0)KLPDGPT(0.0)GS(0.99)S(0.99)EEEEEFLEIPPFNK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 23 111 3.1 2297.07 HUMAN 1 5.7992 25.4401 PDHSRGKSPPRPGNS-p Q6PIF2;S181-p PDHSRGKSPPRPGNS 0.354276950518795 0.963590149962162 0.172333333333333 -0.00633333333333332 8.37531800944233 0.22993837435091 0.172333333333333 -0.00633333333333333 0.145367793704454 0.948431921293233 1.70021391358242 -0.0677249822268821 Q6PIF2 SYCE2 Q6PIF2.S181.p_SYCE2 Q6PIF2_S181s _1_1_181_181 Q6PIF2 Q6PIF2 Synaptonemal complex central element protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20987.20987.5 21.53 21.53 1.106 10 1 1 0 946.0546 4646.2793 S181s TMT10 179 (R) GKsPPRPGNSQPPDVFVSSVAETTSQATASEVQTNRDGEC (-) GKS(0.99)PPRPGNS(0.0)QPPDVFVS(0.0)S(0.0)VAET(0.0)T(0.0)S(0.0)QAT(0.0)AS(0.0)EVQT(0.0)NRDGEC K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SYCE2 25031.4 1 1 5231.1 21.53 HUMAN 1 8.3753 -0.2299 PDIDLNLTGPKIKGD-p Q09666;T2845-p PDIDLNLTGPKIKGD 0.165364843830317 0.0180925584293059 -0.240666666666667 -0.425333333333333 15.6475727386515 23.9942639663714 -0.240666666666667 -0.425333333333333 0.0272422344456904 0.00398633326170084 -3.00080931733696 -4.78781733252574 Q09666 AHNAK Q09666.T2845.p_AHNAK Q09666_T2845t _1_1_2845_2845 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.31631.31631.2 16.1 16.84 9.622 2 1 1 0 1026.547 1972.1189 T2845t TMT10 2835 (K) ISMPDIDLNLtGPK (I) IS(0.0)MPDIDLNLT(0.99)GPK K:TMT10,t:Phosphorylated T AHNAK 629603.7 8 76 1.1 4313.36 HUMAN 1 -15.6476 -23.9943 PDINIEGSEGKFKGP-p Q09666;S3724-p PDINIEGSEGKFKGP 0.48969835948334 0.0420243613245838 -0.258333333333333 0.525 5.71473392591681 18.4485307663087 -0.258333333333333 0.525 0.268241894317522 0.0142937744020069 -1.23357443379968 3.55061637191616 Q09666 AHNAK Q09666.S3724.p_AHNAK Q09666_S3724s _1_1_3724_3724 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23614.23614.3 16.78 16.78 8.004 2 1 1 0 747.3752 2160.1436 S3724s TMT10 3712 (K) VDIDTPDINIEGsEGK (F) VDIDT(0.0)PDINIEGS(0.99)EGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 91 1.1 4313.36 HUMAN 1 -5.7147 18.4485 PDIPACPSPGQKIKK-p Q9H211;S93-p PDIPACPSPGQKIKK 0.233628206047255 0.00363879152855353 -0.201 -0.788333333333333 12.1128303674188 36.2300226409867 -0.201 -0.788333333333334 0.0614776082601633 0.000238230704969301 -2.35236364665261 -8.55824320538356 Q9H211 CDT1 Q9H211.S93.p_CDT1 Q9H211_S93s _1_1_93_93 Q9H211 Q9H211 DNA replication factor Cdt1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22352.22352.3 24.59 24.59 8.222 6 1 1 0 1068.5214 3123.592 S93s TMT10 72 (R) LSVDEVSSPSTPEAPDIPACPsPGQK (I) LS(0.0)VDEVS(0.0)S(0.0)PS(0.0)T(0.0)PEAPDIPACPS(0.99)PGQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CDT1 60959.8 3 3 1732.1 118.73 HUMAN 1 -12.1128 -36.23 PDKESGASVDEVARQ-p P50579;S63-p PDKESGASVDEVARQ 0.24333175644278 0.414531335045367 0.175666666666667 0.107666666666667 11.7377277120512 5.08724566449976 0.175666666666667 0.107666666666667 0.0670235193885874 0.309938433404597 2.28589936052549 1.11979286900809 P50579 METAP2 P50579.S63.p_METAP2 P50579_S60sS63s_2_2_60_63 P50579 P50579|P50579-3|G3V1U3 Methionine aminopeptidase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10010.10010.4 10.66 10.66 10.657 4 2 2 0 837.9055 3188.6638 S60s S63s TMT10 45 (K) SKGPSAAGEQEPDKEsGAsVDEVAR (Q) S(0.0)KGPS(0.0)AAGEQEPDKES(0.99)GAS(0.99)VDEVAR K:TMT10,s:Phosphorylated S METAP2 53746.4 2 3 4498.1 30.66 HUMAN 1 11.7377 5.0872 PDKGELVSDEEEDT_-p Q9UPU7;S957-p PDKGELVSDEEEDT_ 0.662891847562873 0.9739712097412 0.067 0.00333333333333335 3.34136924099221 0.161055875826468 0.067 0.00333333333333335 0.463300827505403 0.963594721760271 0.788934916704226 0.0477897832692034 Q9UPU7 TBC1D2B Q9UPU7.S957.p_TBC1D2B Q9UPU7_S957s _1_1_957_957 Q9UPU7 Q9UPU7 TBC1 domain family member 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13614.13614.3 15.34 15.34 2.329 4 1 1 0 802.0272 2324.1029 S957s TMT10 947 (R) DTSPDKGELVsDEEEDT (-) DT(0.0)S(0.0)PDKGELVS(0.99)DEEEDT(0.0) K:TMT10,s:Phosphorylated S TBC1D2B 110563.1 4 2 4154.1 36.56 HUMAN 1 3.3414 0.1611 PDKLQTLSPALKAPE-p Q13415;S287-p PDKLQTLSPALKAPE 0.0515638782216539 0.000952253650599092 -0.478 -1.641 28.165747405343 55.6030219819314 -0.478 -1.641 0.00152554583120822 2.75231287557865e-06 -5.89288739006706 -19.97924729338 Q13415 ORC1 Q13415.S287.p_ORC1 Q13415_S287s _1_1_287_287 Q13415 Q13415 Origin recognition complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17583.17583.4 15.96 15.96 1.103 3 1 1 0 737.6814 2867.7376 S287s TMT10 278 (R) SQPDKLQTLsPALKAPEK (T) S(0.0)QPDKLQT(0.0)LS(0.99)PALKAPEK K:TMT10,s:Phosphorylated S ORC1 98432 8 5 939.1 198.15 HUMAN 1 -28.1657 -55.603 PDKQAPGSDSQPRCV-p Q9NXE4-4;S465-p PDKQAPGSDSQPRCV 0.963046342073043 0.00671367697232148 0.0146666666666666 0.472 0.315091326226 31.2137549497647 0.0146666666666666 0.472 0.930016957555923 0.000756178813189334 0.0919882254248239 6.79872699670399 Q9NXE4 SMPD4 Q9NXE4.4.S465.p_SMPD4 Q9NXE4-4_S465s _1_1_465_465 Q9NXE4-4 Q9NXE4-4|B1PBA3|H7BXF4|Q9NXE4-9 Isoform 4 of Sphingomyelin phosphodiesterase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4350.4350.2 11.08 7.86 2.014 2 1 1 0 676.3145 1271.6541 S465s TMT10 461 (K) QAPGsDSQPR (C) QAPGS(0.99)DS(0.0)QPR s:Phosphorylated S SMPD4 98945.3 1 3 1752.1 117.58 HUMAN 1 0.3151 31.2138 PDLAHQPSPPVNGQP-p E9PRY8;S263-p PDLAHQPSPPVNGQP 0.961964786623094 0.141566225111656 0.00899999999999999 0.156333333333333 0.324985736762284 11.1881616461271 0.00899999999999998 0.156333333333333 0.92790053756283 0.0760648188612342 0.0947798588054546 2.18810095931737 E9PRY8 NotFound E9PRY8.S263.p_NotFound E9PRY8_S263s _1_1_263_263 E9PRY8 E9PRY8 Elongation factor 1-delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28185.28185.4 24.56 20.47 8.929 4 1 1 0 1020.2786 3998.1409 S263s TMT10 244 (R) QGTPNTGQQVAVPDLAHQPsPPVNGQPPLGSLQALVR (E) QGT(0.0)PNT(0.0)GQQVAVPDLAHQPS(0.99)PPVNGQPPLGS(0.0)LQALVR s:Phosphorylated S EEF1D 77196.2 1 2 369.1 339.47 HUMAN 1 0.325 11.1882 PDLDRPGSDRQERER-p Q7Z4V5-4;S656-p PDLDRPGSDRQERER 0.525166344596369 0.170878120852824 0.226 0.393 5.1760322343564 10.08800020407 0.226 0.393 0.303666424954691 0.0979941115049279 1.13622125388196 1.99618808165842 Q7Z4V5 HDGFRP2 Q7Z4V5.4.S656.p_HDGFRP2 Q7Z4V5-4_S656s _1_1_656_656 Q7Z4V5-4 Q7Z4V5-3|Q7Z4V5-4 Isoform 4 of Hepatoma-derived growth factor-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5331.5331.4 14 10.13 99 1 1 1 0 509.7412 1955.9732 S656s TMT10 647 (R) EGPDLDRPGsDRQER (E) EGPDLDRPGS(1.0)DRQER s:Phosphorylated S HDGFL2 74899.1 6 13 712.1 238.42 HUMAN 1 5.176 10.088 PDLELSDSEAESDGN-p Q92613;S776-p PDLELSDSEAESDGN 0.676492954068529 0.864252658206572 0.0763333333333333 -0.0193333333333333 3.17948503308712 0.893717576598193 0.0763333333333334 -0.0193333333333333 0.480896367602948 0.814007192582517 0.756637813784896 -0.246977936037275 Q92613 JADE3 Q92613.S776.p_JADE3 Q92613_S774sS776s_2_2_774_776 Q92613 Q92613 Protein Jade-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21768.21768.4 20.07 20.07 1.847 5 2 2 0 881.1157 3361.5054 S774s S776s TMT10 759 (R) APYQENDGYCPDLELsDsEAESDGNK (E) APY(0.0)QENDGY(0.0)CPDLELS(0.99)DS(0.99)EAES(0.0)DGNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S JADE3 95461.1 6 9 1439.1 142.43 HUMAN 1 3.1795 -0.8937 PDLGPQKSPLWEKNG-p O75128-2;S537-p PDLGPQKSPLWEKNG 0.117568546049089 0.0188127904433449 -0.295 -0.462 19.341043259044 23.7429103050372 -0.295 -0.462 0.0116384641748828 0.00422385469398834 -3.73893653352365 -4.72676292999656 O75128 COBL O75128.2.S537.p_COBL O75128-2_S537s _1_1_537_537 O75128-2 O75128-2|O75128-7|O75128-3 Isoform 2 of Protein cordon-bleu HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22651.22651.4 24.13 24.13 3.472 4 1 1 0 1132.5603 4447.2534 S537s TMT10 512 (K) DKWATDQEDCSDQDLAGTPDLGPQKsPLWEK (N) DKWAT(0.0)DQEDCS(0.0)DQDLAGT(0.0)PDLGPQKS(0.99)PLWEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S COBL 144838.3 2 12 254.1 405.31 HUMAN 1 -19.341 -23.7429 PDLLMARSFGDKDLI-p Q5VWJ9;S48-p PDLLMARSFGDKDLI 0.0750547208120352 0.269047515902397 0.440666666666667 0.111 24.0734236315578 7.5085004485417 0.440666666666667 0.111 0.00391433180725932 0.177480218676137 4.81286684527019 1.54930253731126 Q5VWJ9 SNX30 Q5VWJ9.S48.p_SNX30 Q5VWJ9_S48s _1_1_48_48 Q5VWJ9 Q5VWJ9 Sorting nexin-30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24958.24958.4 18.79 17.36 5.26 9 1 1 0 871.9493 3404.8062 S48s TMT10 48 (R) sFGDKDLILPNGGTPAGTSSPASSSSLLNR (L) S(0.99)FGDKDLILPNGGT(0.0)PAGT(0.0)S(0.0)S(0.0)PAS(0.0)S(0.0)S(0.0)S(0.0)LLNR K:TMT10,s:Phosphorylated S SNX30 50018 2 3 2815.1 69.64 HUMAN 1 24.0734 7.5085 PDLPEQFSPPDVAPP-p O00459;S119-p PDLPEQFSPPDVAPP 0.34842690082331 0.018957101455693 -0.145333333333333 -0.495 8.50930644547156 23.6894344772643 -0.145333333333333 -0.495 0.140951387534968 0.0042761856548595 -1.72341806303755 -4.71384114403878 O00459 PIK3R2 O00459.S119.p_PIK3R2 O00459_S119s _1_1_119_119 O00459 O00459 Phosphatidylinositol 3-kinase regulatory subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36638.36638.4 27.68 21.89 3.958 2 1 1 0 887.7251 3467.9078 S119s TMT10 102 (R) DGAPEPGLTLPDLPEQFsPPDVAPPLLVK (L) DGAPEPGLT(0.0)LPDLPEQFS(0.99)PPDVAPPLLVK K:TMT10,s:Phosphorylated S PIK3R2 81886.1 1 1 3447.1 50.76 HUMAN 1 -8.5093 -23.6894 PDLPKPPSPAPSSED-p Q8TBE0;S101-p PDLPKPPSPAPSSED 0.633204865850603 0.328892236536392 -0.075 -0.0943333333333333 3.69661914803826 6.39485805623355 -0.075 -0.0943333333333333 0.426911727421393 0.229358159209302 -0.858674875879034 -1.35427016858646 Q8TBE0 BAHD1 Q8TBE0.S101.p_BAHD1 Q8TBE0_S101s _1_1_101_101 Q8TBE0 Q8TBE0|Q8TBE0-2|Q8TBE0-3 Bromo adjacent homology domain-containing 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21325.21536.5 19.89 19.89 2.952 4 1 1 0 744.573 3638.859 S101s TMT10 85 (R) SADEADELPPDLPKPPsPAPSSEDPGLAQPR (K) S(0.0)ADEADELPPDLPKPPS(0.99)PAPS(0.0)S(0.0)EDPGLAQPR K:TMT10,s:Phosphorylated S BAHD1 85848.7 5 2 636.1 256.1 HUMAN 1 -3.6966 -6.3949 PDLRSMVSPVPSPTG-p P85037;S239-p PDLRSMVSPVPSPTG 0.678718870744885 0.147144465082663 -0.066 -0.151 3.15040442089583 10.9566685643956 -0.066 -0.151 0.484127282897542 0.0802293259658268 -0.750799026178625 -2.14755594683607 P85037 FOXK1 P85037.S239.p_FOXK1 P85037_S239sS243s_2_2_239_243 P85037 P85037|P85037-2 Forkhead box protein K1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21906.21906.2 16.24 16.24 1.316 8 2 2 0 1407.6461 2654.3479 S239s S243s TMT10 236 (R) SMVsPVPsPTGTISVPNSCPASPR (G) S(0.0)MVS(0.99)PVPS(0.99)PT(0.0)GT(0.0)IS(0.0)VPNS(0.0)CPAS(0.0)PR C:Carbamidomethylation,s:Phosphorylated S FOXK1 75912.4 14 15 686.1 243.66 HUMAN 1 -3.1504 -10.9567 PDLSLEASEGSIKLP-p Q09666;S5397-p PDLSLEASEGSIKLP 0.52537498304992 0.200501267663209 -0.0926666666666667 0.133666666666667 5.17055844310926 9.18310828634123 -0.0926666666666667 0.133666666666667 0.304049403472798 0.120694970068786 -1.13522394461733 1.83938808044066 Q09666 AHNAK Q09666.S5397.p_AHNAK Q09666_S5397s _1_1_5397_5397 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26628.26628.3 18.26 18.26 1.153 4 1 1 0 955.5393 2784.6326 S5397s TMT10 5385 (K) VSVGAPDLSLEAsEGSIKLPK (M) VS(0.0)VGAPDLS(0.0)LEAS(0.99)EGS(0.0)IKLPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 6 136 1.1 4313.36 HUMAN 1 -5.1706 9.1831 PDLSNQNSDQANEEW-p P48634;S1314-p PDLSNQNSDQANEEW 0.326502819643871 0.0603647097985877 0.198333333333333 0.333 9.09973187563707 16.2410735483164 0.198333333333333 0.333 0.123034472738723 0.0237625281944667 1.8256284605254 3.11237644920463 P48634 PRRC2A P48634.S1314.p_PRRC2A P48634_S1314s _1_1_1314_1314 P48634 P48634|P48634-3 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19221.19221.3 24.06 24.06 1.5 9 1 1 0 1190.4883 3489.5 S1314s TMT10 1306 (K) SPDLSNQNsDQANEEWETASESSDFTSER (R) S(0.0)PDLS(0.0)NQNS(0.99)DQANEEWET(0.0)AS(0.0)ES(0.0)S(0.0)DFT(0.0)S(0.0)ER s:Phosphorylated S PRRC2A 229315.4 1 26 36.1 882.05 HUMAN 1 9.0997 16.2411 PDMGEIASFDKAKLK-p P63313;S12-p PDMGEIASFDKAKLK 0.515885052439712 0.0192104793400816 -0.0866666666666667 -0.422333333333333 5.30629700270417 23.5881337238618 -0.0866666666666667 -0.422333333333334 0.294693325561433 0.00437710160168742 -1.15990412451938 -4.68942758091371 P63313 TMSB10 P63313.S12.p_TMSB10 P63313_S12s _1_1_12_12 P63313 P63313 Thymosin beta-10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21964.21964.3 14.5 14.5 99 1 1 1 0 702.0065 2024.0411 S12s Acetyl 2 (M) ADKPDMGEIAsFDK (A) ADKPDMGEIAS(1.0)FDK K:TMT10,s:Phosphorylated S TMSB10 5025.6 2 1 6037.1 14.5 HUMAN 1 -5.3063 -23.5881 PDPEVKKSPGADVTC-p Q96BY7;S1743-p PDPEVKKSPGADVTC 0.337410296300458 0.173427485358535 -0.187333333333333 -0.293 8.78759180303016 10.0038755150575 -0.187333333333333 -0.293 0.132202850615332 0.0999108027724082 -1.77159474653962 -1.9815820894694 Q96BY7 ATG2B Q96BY7.S1743.p_ATG2B Q96BY7_S1743s _1_1_1743_1743 Q96BY7 Q96BY7 Autophagy-related protein 2 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12185.12185.3 10.51 5.47 4.533 3 1 1 0 642.6675 1846.0257 S1743s TMT10 1742 (K) KsPGADVTCSLPR (H) KS(0.99)PGADVT(0.0)CS(0.0)LPR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ATG2B 234641.2 1 9 1188.1 168.47 HUMAN 1 -8.7876 -10.0039 PDPGSPRTPPPTSRT-p Q96LL9;T140-p PDPGSPRTPPPTSRT 0.0223514213892814 0.0197123423703082 -0.956333333333333 -0.926666666666667 38.2736478632354 23.4049367034843 -0.956333333333333 -0.926666666666667 0.000148811061180302 0.00456568904445257 -9.40184593684629 -4.64549009356302 Q96LL9 DNAJC30 Q96LL9.T140.p_DNAJC30 Q96LL9_T140t _1_1_140_140 Q96LL9 Q96LL9 DnaJ homolog subfamily C member 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6214.6214.3 12.56 8.47 1.589 5 1 1 0 680.6754 1960.045 T140t TMT10 130 (R) TPAPDPGSPRtPPPTSR (T) T(0.0)PAPDPGS(0.0)PRT(0.99)PPPT(0.0)S(0.0)R t:Phosphorylated T DNAJC30 26075 1 5 2713.1 73.01 HUMAN 1 -38.2736 -23.4049 PDPLLRPSPLLATGQ-p Q9Y618;S121-p PDPLLRPSPLLATGQ 0.342642472209909 0.139613235831994 0.134333333333333 0.164 8.63858481137409 11.2660190819306 0.134333333333333 0.164 0.136817458527226 0.0747133297084195 1.74580062579213 2.20176036061653 Q9Y618 NCOR2 Q9Y618.S121.p_NCOR2 Q9Y618_S121s _1_1_121_121 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34867.34867.4 20.58 20.58 4.453 4 1 1 0 870.7354 3399.9503 S121s TMT10 110 (R) LELLPDPLLRPsPLLATGQPAGSEDLTK (D) LELLPDPLLRPS(0.99)PLLAT(0.0)GQPAGS(0.0)EDLT(0.0)K K:TMT10,s:Phosphorylated S NCOR2 275540.8 4 3 16.1 1053.89 HUMAN 1 8.6386 11.266 PDPVAAGSPGLKSPQ-p Q96H86;S131-p PDPVAAGSPGLKSPQ 0.279591442705084 0.828428337008755 -0.260666666666667 0.027 10.4614273295121 1.14253795868489 -0.260666666666667 0.027 0.0899202005936916 0.768681102082783 -2.06200276193097 0.309229003079753 Q96H86 ZNF764 Q96H86.S131.p_ZNF764 Q96H86_S131s _1_1_131_131 Q96H86 Q96H86|Q96H86-2|B7Z5R0 Zinc finger protein 764 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17632.17632.4 20.13 16.72 18.956 2 1 1 0 666.1174 2581.4804 S131s TMT10 116 (R) EGTGALEKPDPVAAGsPGLK (S) EGT(0.0)GALEKPDPVAAGS(0.99)PGLK K:TMT10,s:Phosphorylated S ZNF764 46082.9 2 1 5357.1 20.13 HUMAN 1 -10.4614 1.1425 PDQQLQRSPPEFQ__-p Q96GX2;S92-p PDQQLQRSPPEFQ__ 0.515885052439712 0.4252714561321 0.0916666666666667 -0.078 5.30677065083248 4.94198977386168 0.0916666666666667 -0.078 0.294661187614322 0.320480066904161 1.15999006136593 -1.09319783911493 Q96GX2 ATXN7L3B Q96GX2.S92.p_ATXN7L3B Q96GX2_S92s _1_1_92_92 Q96GX2 Q96GX2 Ataxin-7-like protein 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22442.22442.4 23.32 19.18 22.871 2 1 1 0 904.4333 3534.7419 S92s TMT10 68 (K) GACRLPLCSLPGEPGNGPDQQLQRsPPEFQ (-) GACRLPLCS(0.0)LPGEPGNGPDQQLQRS(0.99)PPEFQ C:Carbamidomethylation,s:Phosphorylated S ATXN7L3B 11056.2 15 1 3802.1 42.8 HUMAN 1 5.3068 -4.942 PDQSLAESDSEDPSG-p Q9NYQ6;S2871-p PDQSLAESDSEDPSG 0.796999034788062 0.0332666986005803 -0.0386666666666667 0.270666666666667 1.90187201130695 19.9272160212958 -0.0386666666666667 0.270666666666667 0.645375981990778 0.0101690035248033 -0.486959538721587 3.85975256465933 Q9NYQ6 CELSR1 Q9NYQ6.S2871.p_CELSR1 Q9NYQ6_S2871s _1_1_2871_2871 Q9NYQ6 Q9NYQ6 Cadherin EGF LAG seven-pass G-type receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16256.16256.5 24.87 23.32 1.597 4 1 1 0 726.3488 3547.7454 S2871s TMT10 2852 (K) GDAVANHVPAGWPDQSLAEsDSEDPSGKPR (L) GDAVANHVPAGWPDQS(0.0)LAES(0.99)DS(0.0)EDPS(0.0)GKPR K:TMT10,s:Phosphorylated S CELSR1 334558.1 6 5 1317.1 154.7 HUMAN 1 -1.9019 19.9272 PDRRFSRSAIPEQII-p A8CG34;S262-p PDRRFSRSAIPEQII 0.170911150358501 0.571434679042828 0.431 0.062 15.3028548265067 3.27575275467599 0.431 0.062 0.0294926989237976 0.470353873084361 2.93544720898652 0.775770516662479 A8CG34 NotFound A8CG34.S262.p_NotFound A8CG34_S262s _1_1_262_262 A8CG34 Q96HA1|A8CG34|A0A075B7F8|Q96HA1-3|A8CG34-2|A0A087WY75|Q96HA1-2|Q6PJE2|C9JER0|Q6PJE2-5 Nuclear envelope pore membrane protein POM 121C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25489.25489.3 11.33 6.66 1.163 8 1 1 0 956.1292 2786.408 S262s Hydrogen 262 (R) sAIPEQIISSTLSSPSSNAPDPCAK (E) S(0.99)AIPEQIIS(0.0)S(0.0)T(0.0)LS(0.0)S(0.0)PS(0.0)S(0.0)NAPDPCAK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S POM121C 125455.9 1 12 133.2 532.02 HUMAN 1 15.3029 3.2758 PDSDAYNSGDDKNEK-p Q5T200;S853-p PDSDAYNSGDDKNEK 0.9215282521125 0.214331342452024 0.0153333333333333 0.178 0.696740444059558 8.80210714288719 0.0153333333333333 0.178 0.851777091551888 0.131761729189783 0.195977744304595 1.77348465794277 Q5T200 ZC3H13 Q5T200.S853.p_ZC3H13 Q5T200_S845sS848sS853s_3_3_845_853 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5221.5221.4 15.06 15.06 2.817 4 3 3 0 716.2928 2622.2432 S845s S848s S853s Hydrogen 842 (R) REHsPDsDAYNsGDDKNEK (H) REHS(0.99)PDS(0.99)DAY(0.0)NS(0.99)GDDKNEK K:TMT10-Lys-Only,s:Phosphorylated S ZC3H13 197316.7 14 48 24.1 987.82 HUMAN 1 0.6967 8.8021 PDSEELFSDNENNFV-p P51587;S884-p PDSEELFSDNENNFV 0.265812792667921 0.162822520207162 0.272 0.262333333333333 10.9063632967443 10.3644137718004 0.272 0.262333333333333 0.0811640426347038 0.0919514586212989 2.13971290820311 2.04423799376975 P51587 BRCA2 P51587.S884.p_BRCA2 P51587_S884s_1_1_884_884 P51587 P51587 Breast cancer type 2 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32172.32172.3 10.89 10.89 0 3 1 1 0 1113.177 3256.5596 S884s N889n TMT10 873 (K) ITVNPDSEELFsDNENnFVFQVANER (N) IT(0.0)VN(0.0)PDS(0.0)EELFS(0.99)DN(0.33)EN(0.33)N(0.33)FVFQVAN(0.0)ER s:Phosphorylated S,n:Deamidated BRCA2 388531.4 1 5 876.1 208.99 HUMAN 1 10.9064 10.3644 PDSEHGLSPDSENFD-p P25054;S2093-p PDSEHGLSPDSENFD 0.204437813280498 0.0263681512688514 -0.262666666666667 -0.297666666666667 13.3439035402459 21.441446785675 -0.262666666666667 -0.297666666666667 0.0463030549969103 0.00717555208901824 -2.57322512135758 -4.19107022276324 P25054 APC P25054.S2093.p_APC P25054_S2088sS2093sS2096s_3_3_2088_2096 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22049.22049.4 10 10 99 3 3 3 0 793.3399 2930.4321 S2088s S2093s S2096s TMT10 2082 (K) DIQRPDsEHGLsPDsENFDWK (A) DIQRPDS(1.0)EHGLS(1.0)PDS(1.0)ENFDWK K:TMT10,s:Phosphorylated S APC 313808.5 1 72 33.1 890.71 HUMAN 1 -13.3439 -21.4414 PDSHPHLSPEALGYF-p Q86U38;S58-p PDSHPHLSPEALGYF 0.397712293061704 0.946696182647432 0.176333333333333 -0.00766666666666664 7.39184746798816 0.339934780525522 0.176333333333333 -0.00766666666666664 0.182311999080078 0.924712060548416 1.52944458171655 -0.0989781111074195 Q86U38 NOP9 Q86U38.S58.p_NOP9 Q86U38_S58s _1_1_58_58 Q86U38 Q86U38|Q86U38-2 Nucleolar protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15473.15473.4 15.13 15.13 1.775 4 1 1 0 668.8266 2592.3157 S58s TMT10 47 (R) SEPAPDSHPHLsPEALGYFRR (A) S(0.0)EPAPDS(0.0)HPHLS(0.99)PEALGY(0.0)FRR s:Phosphorylated S NOP9 70178.2 1 1 5090.1 23.11 HUMAN 1 7.3918 -0.3399 PDSSKADSDAASSGG-p O95402;S381-p PDSSKADSDAASSGG 0.2460723690647 0.268861303835123 0.240666666666667 -0.158333333333333 11.6512090383225 7.51232934484867 0.240666666666667 -0.158333333333333 0.0683721278686294 0.17732381468971 2.27061717822338 -1.54996861429646 O95402 MED26 O95402.S381.p_MED26 O95402_S381s _1_1_381_381 O95402 O95402|B8ZZF3 Mediator of RNA polymerase II transcription subunit 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10687.10687.3 17.02 17.02 2.515 8 1 1 0 966.7936 2818.3946 S381s TMT10 370 (R) AGFSPDSSKADsDAASSGGSDSK (K) AGFS(0.0)PDS(0.0)S(0.0)KADS(0.99)DAAS(0.0)S(0.0)GGS(0.0)DS(0.0)K K:TMT10,s:Phosphorylated S MED26 65901.7 3 7 901.1 203.59 HUMAN 1 11.6512 -7.5123 PDSSPCDSDHDMAFP-p Q9BVV6-3;S1139-p PDSSPCDSDHDMAFP 0.712330814255611 0.0320849526179946 0.0596666666666666 -0.270333333333333 2.77166281811563 20.158433254278 0.0596666666666666 -0.270333333333333 0.528242960432143 0.00964176793968725 0.673640190233049 -3.90933946895967 Q9BVV6 KIAA0586 Q9BVV6.3.S1139.p_KIAA0586 Q9BVV6-3_S1139s _1_1_1139_1139 Q9BVV6-3 Q9BVV6-3|Q9BVV6-4|Q9BVV6-2|A0A087WYM5 Isoform 3 of Protein TALPID3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17129.17129.3 17.08 17.08 1.15 4 1 1 0 848.7108 2464.1525 S1139s TMT10 1131 (K) TPDSSPCDsDHDMAFPVK (E) T(0.0)PDS(0.0)S(0.0)PCDS(0.99)DHDMAFPVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIAA0586 183368.4 1 8 1314.1 155.12 HUMAN 1 2.7717 -20.1584 PDVAKRLSLTMGGVQ-p O75815;S290-p PDVAKRLSLTMGGVQ 0.7402310052069 0.0201264196371064 -0.054 0.347 2.47833911929329 23.2428038800469 -0.054 0.347 0.565153066059263 0.00473935905274586 -0.612308495399016 4.60683159171925 O75815 BCAR3 O75815.S290.p_BCAR3 O75815_S290s _1_1_290_290 O75815 O75815|O75815-3 Breast cancer anti-estrogen resistance protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15392.15392.3 10.09 10.09 2.362 2 1 1 0 533.2865 1517.8783 S290s TMT10 288 (K) RLsLTMGGVQAR (E) RLS(0.99)LT(0.0)MGGVQAR s:Phosphorylated S BCAR3 93533.8 3 6 401.1 327.42 HUMAN 1 -2.4783 23.2428 PDVAPIVSDQKPSVS-p P30414;S320-p PDVAPIVSDQKPSVS 0.662522692037726 0.0876311942740425 -0.0826666666666667 0.261 3.34719562884623 13.9963662121013 -0.0826666666666667 0.261 0.462679691264529 0.0398440410430152 -0.790090992473732 2.69063779566467 P30414 NKTR P30414.S320.p_NKTR P30414_S320s _1_1_320_320 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22690.22690.4 18.96 18.96 7.716 3 1 1 0 637.6172 2467.4739 S320s TMT10 312 (K) IPDVAPIVsDQKPSVSK (S) IPDVAPIVS(0.99)DQKPS(0.0)VS(0.0)K K:TMT10,s:Phosphorylated S NKTR 166700.6 2 4 202.1 449.45 HUMAN 1 -3.3472 13.9964 PDVARGLSPREQPLG-p O75376-2;S1652-p PDVARGLSPREQPLG 0.957246455101486 0.804961507392114 0.0133333333333333 -0.041 0.370750143934413 1.31946087011207 0.0133333333333334 -0.0409999999999999 0.918173989325324 0.737995838688596 0.107621165069781 -0.352161283990181 O75376 NCOR1 O75376.2.S1652.p_NCOR1 O75376-2_S1652s _1_1_1652_1652 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19834.19834.3 15 8.07 5.751 3 1 1 0 721.0488 2081.1705 S1652s TMT10 1650 (R) GLsPREQPLGLPYPATR (G) GLS(0.99)PREQPLGLPY(0.0)PAT(0.0)R s:Phosphorylated S NCOR1 259453.1 1 21 35.1 889.74 HUMAN 1 0.3708 -1.3195 PDVEMSDSESEASEK-p Q6IE81;S812-p PDVEMSDSESEASEK 0.889319369501203 0.646809183668774 -0.021 0.0846666666666667 0.994755397461724 2.57941047009738 -0.021 0.0846666666666667 0.795288056339479 0.55215238572002 -0.272562356236703 0.633527960145598 Q6IE81 JADE1 Q6IE81.S812.p_JADE1 Q6IE81_S810sS812s_2_2_810_812 Q6IE81 Q6IE81 Protein Jade-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20088.20088.4 18.89 18.89 1.157 6 2 2 0 931.1639 3561.6993 S810s S812s TMT10 794 (K) LKSDNENDGYVPDVEMsDsESEASEK (K) LKS(0.0)DNENDGY(0.0)VPDVEMS(0.99)DS(0.99)ES(0.0)EAS(0.0)EK K:TMT10,s:Phosphorylated S JADE1 97129.2 2 6 1555.1 131.82 HUMAN 1 -0.9948 2.5794 PDVILCNSVELIRER-p Q96CW6;S168-p PDVILCNSVELIRER 0.723956893767446 0.280570835389221 -0.059 0.118333333333333 2.65515269062917 7.27387910630757 -0.059 0.118333333333333 0.542606173873969 0.187332051586958 -0.64945527409034 1.50844103209156 Q96CW6 SLC7A6OS Q96CW6.S168.p_SLC7A6OS Q96CW6_S168s _1_1_168_168 Q96CW6 Q96CW6 Probable RNA polymerase II nuclear localization protein SLC7A6OS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20818.20818.3 16.65 14.31 5.519 3 1 1 0 809.0724 2345.2332 S168s TMT10 158 (K) TSDPDVILCNsVELIRER (L) T(0.0)S(0.0)DPDVILCNS(0.99)VELIRER C:Carbamidomethylation,s:Phosphorylated S SLC7A6OS 35255.4 3 4 1926.1 106.59 HUMAN 1 -2.6552 7.2739 PDVQRGRSFHFYDAM-p G3V1A6;S127-p PDVQRGRSFHFYDAM 0.707346369684743 0.621219323750858 -0.0603333333333333 -0.0623333333333333 2.8260823684689 2.8117295980876 -0.0603333333333334 -0.0623333333333333 0.521665076292622 0.523391951780604 -0.684860737110755 -0.681813670706761 G3V1A6 NotFound G3V1A6.S127.p_NotFound G3V1A6_S127s _1_1_127_127 G3V1A6 G3V1A6|P57764 Gasdermin domain containing 1, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.39127.39127.4 23.73 21.6 3.376 3 1 1 0 855.4201 3338.6992 S127s TMT10 125 (R) GRsFHFYDAMDGQIQGSVELAAPGQAK (I) GRS(0.99)FHFY(0.0)DAMDGQIQGS(0.0)VELAAPGQAK K:TMT10,s:Phosphorylated S GSDMD 58304.1 2 2 2053.1 100.32 HUMAN 1 -2.8261 -2.8117 PDYAPMESSDEEDEE-p P55081;S52-p PDYAPMESSDEEDEE 0.926499167493542 0.00967201607434797 0.0163333333333333 0.412 0.654453116207476 28.3891618702203 0.0163333333333333 0.412 0.860111369290151 0.0014490514739545 0.184804484305307 5.94783742587064 P55081 MFAP1 P55081.S52.p_MFAP1 P55081_S52s_1_1_52_52 P55081 P55081 Microfibrillar-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19839.19839.4 11.62 11.62 1.248 3 1 1 0 869.1667 3377.6815 M50m S52s TMT10 44 (K) RPDYAPmEsSDEEDEEFQFIKK (A) RPDY(0.0)APM(1.0)ES(0.99)S(0.0)DEEDEEFQFIKK K:TMT10,m:Oxidized methionine,s:Phosphorylated S MFAP1 51957.5 9 3 354.1 349.52 HUMAN 1 0.6545 28.3892 PDYDSVASDEDTDLE-p Q14161;S397-p PDYDSVASDEDTDLE 0.690001442222247 0.0167801058367106 0.058 0.352 3.01971846090157 24.5033383829585 0.058 0.352 0.498916829579797 0.00354540752145239 0.724414501918404 4.9131035417438 Q14161 GIT2 Q14161.S397.p_GIT2 Q14161_S394sS397sT401t_3_3_394_401 Q14161 Q14161|F8WAK2|Q14161-6|Q14161-7|Q14161-11|Q14161-2|F8W822|Q14161-3|Q14161-5|Q14161-4|F8VXI9|Q14161-8|Q14161-10 ARF GTPase-activating protein GIT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16932.16932.5 22.29 22.29 1.743 10 3 3 0 914.1812 4326.9646 S394s S397s T401t TMT10 375 (K) TINNQHSVESQDNDQPDYDsVAsDEDtDLETTASK (T) T(0.0)INNQHS(0.0)VES(0.0)QDNDQPDY(0.0)DS(0.99)VAS(0.99)DEDT(0.99)DLET(0.0)T(0.0)AS(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T GIT2 85168.8 3 19 474.1 301.74 HUMAN 1 3.0197 24.5033 PDYERAYSPEYRRGA-p A0A1B0GTW1;S325-p PDYERAYSPEYRRGA 0.857458729255002 0.45531393872914 0.0373333333333333 -0.112333333333333 1.30244753890081 4.55534819181825 0.0373333333333333 -0.112333333333333 0.740892581265817 0.350320200558673 0.348113342995778 -1.02171288342956 A0A1B0GTW1 NotFound A0A1B0GTW1.S325.p_NotFound A0A1B0GTW1_S325s _1_1_325_325 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10221.10221.4 13.73 8.43 1.4 5 1 1 0 590.769 2280.0883 S325s TMT10 315 (R) AYDPDYERAYsPEYRR (G) AY(0.0)DPDY(0.0)ERAY(0.0)S(0.99)PEY(0.0)RR s:Phosphorylated S TJP2 141123.7 12 7 41.1 827.72 HUMAN 1 1.3024 -4.5553 PDYFKDMTPTIRKTQ-p O00559-2;T99-p PDYFKDMTPTIRKTQ 0.310281429434343 0.0043811486207803 -0.146666666666667 -0.843 9.49864452172535 34.6545212357746 -0.146666666666667 -0.843 0.112236870259352 0.000342411132790603 -1.89472334744803 -7.9678929000959 O00559 EBAG9 O00559.2.T99.p_EBAG9 O00559-2_T99t _1_1_99_99 O00559-2 O00559-2|E9PND3 Isoform 2 of Receptor-binding cancer antigen expressed on SiSo cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10594.10594.3 7.97 7.97 2.33 2 1 1 0 500.6063 1419.8394 T99t TMT10 97 (K) DMtPTIRK (T) DMT(0.99)PT(0.0)IRK K:TMT10,t:Phosphorylated T EBAG9 29751.1 1 3 2390.1 85.52 HUMAN 1 -9.4986 -34.6545 PDYNESDSESNVSVK-p Q7Z6E9;S1646-p PDYNESDSESNVSVK 0.391246645908829 0.0461741357430241 0.123333333333333 0.304666666666667 7.51391175691304 17.8727579797984 0.123333333333333 0.304666666666667 0.177259216072542 0.0163201521022724 1.55070417228225 3.43377349265789 Q7Z6E9 RBBP6 Q7Z6E9.S1646.p_RBBP6 Q7Z6E9_S1644sS1646s_2_2_1644_1646 Q7Z6E9 Q7Z6E9|Q7Z6E9-2|Q7Z6E9-4 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22482.22482.5 24.65 19.85 1.109 12 2 2 0 1049.2761 5082.4278 S1644s S1646s TMT10 1624 (R) LSSDLTRETDEAAFEPDYNEsDsESNVSVKEEESSGNISK (D) LS(0.0)S(0.0)DLT(0.0)RET(0.0)DEAAFEPDY(0.0)NES(0.99)DS(0.99)ES(0.0)NVS(0.0)VKEEES(0.0)S(0.0)GNIS(0.0)K K:TMT10,s:Phosphorylated S RBBP6 202473.6 8 32 27.1 935.6 HUMAN 1 7.5139 17.8728 PDYNRTNSPSSAKKP-p Q14669-3;S127-p PDYNRTNSPSSAKKP 0.053164661743746 0.0185513263538654 0.640666666666667 -0.401666666666667 27.6725429862212 23.8303392219662 0.640666666666667 -0.401666666666667 0.00170901431860494 0.00413967339087879 5.7540785467743 -4.74794001129167 Q14669 TRIP12 Q14669.3.S127.p_TRIP12 Q14669-3_S127s _1_1_127_127 Q14669-3 Q14669-3|Q14669-2 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5422.5422.3 12.04 12.04 1.122 7 1 1 0 740.6954 2140.1035 S127s TMT10 117 (R) SASPDYNRTNsPSSAK (K) S(0.0)AS(0.0)PDY(0.0)NRT(0.0)NS(0.99)PS(0.0)S(0.0)AK K:TMT10,s:Phosphorylated S TRIP12 227456.1 4 3 234.1 420.47 HUMAN 1 27.6725 -23.8303 PDYRKRVSVELTNSL-p P14923;S665-p PDYRKRVSVELTNSL 0.0684521497222417 0.472389754387631 -0.407 0.0746666666666667 25.1051167105203 4.34164937963235 -0.407 0.0746666666666667 0.00308665669502149 0.367989190805834 -5.07044896859348 0.981721480727063 P14923 JUP P14923.S665.p_JUP P14923_S665s _1_1_665_665 P14923 P14923 Junction plakoglobin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29915.29915.3 15.71 13.4 4.267 3 1 1 0 592.332 1695.0093 S665s TMT10 664 (R) VsVELTNSLFK (H) VS(0.99)VELT(0.0)NS(0.0)LFK K:TMT10,s:Phosphorylated S JUP 82485 37 9 957.1 195.02 HUMAN 1 -25.1051 4.3416 PDYRLYKSEPELTTV-p Q9HAU0-6;S975-p PDYRLYKSEPELTTV 0.167787448802573 0.0678568952262553 -0.313666666666667 0.213333333333333 15.4844217671365 15.5473656598848 -0.313666666666667 0.213333333333333 0.0282851068248094 0.0278781168452117 -2.96980828791573 2.97972231904882 Q9HAU0 PLEKHA5 Q9HAU0.6.S975.p_PLEKHA5 Q9HAU0-6_S975s_1_1_975_975 Q9HAU0-6 Q9HAU0|Q9HAU0-8|A0JP02|Q9HAU0-6|Q9HAU0-4|Q9HAU0-2 Isoform 6 of Pleckstrin homology domain-containing family A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21615.21615.4 17.74 17.74 4.452 5 1 1 0 809.6608 3154.661 S975s N989n TMT10 972 (R) LYKsEPELTTVAEVDESnGEEK (S) LY(0.0)KS(0.99)EPELT(0.0)T(0.0)VAEVDES(0.0)N(1.0)GEEK K:TMT10,s:Phosphorylated S,n:Deamidated PLEKHA5 147692.6 7 10 374.1 338.83 HUMAN 1 -15.4844 15.5474 PEAARVASPTSGVKR-p Q9Y4H2;S1100-p PEAARVASPTSGVKR 0.0207270033969741 0.000952253650599092 0.737 1.589 39.2753282958705 55.3332745525814 0.737 1.589 0.000118159098925826 2.92868420341914e-06 9.83232530136384 19.7489986211858 Q9Y4H2 IRS2 Q9Y4H2.S1100.p_IRS2 Q9Y4H2_S1100s _1_1_1100_1100 Q9Y4H2 Q9Y4H2 Insulin receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10496.10528.2 12.2 6.84 1.45 3 1 1 0 692.386 1303.7986 S1100s TMT10 1098 (R) VAsPTSGVK (R) VAS(0.99)PT(0.0)S(0.0)GVK K:TMT10,s:Phosphorylated S IRS2 138529.8 3 9 1344.1 151.43 HUMAN 1 39.2753 55.3333 PEACKQESPQKLGAP-p Q9P219;S1825-p PEACKQESPQKLGAP 0.390280290576841 0.00286199361397657 -0.116666666666667 -0.717 7.55431856217221 38.4703223726354 -0.116666666666667 -0.717 0.175617642870819 0.000142222321293725 -1.55773653937992 -9.4641735375115 Q9P219 CCDC88C Q9P219.S1825.p_CCDC88C Q9P219_S1825s _1_1_1825_1825 Q9P219 Q9P219|Q9P219-2|Q9P219-3 Protein Daple HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12722.12722.5 11.92 11.92 5.427 2 1 1 0 641.9401 3125.698 S1825s TMT10 1815 (R) ASGPEACKQEsPQKLGAPEALGGR (E) AS(0.0)GPEACKQES(0.99)PQKLGAPEALGGR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCDC88C 229367.3 2 16 742.1 234.08 HUMAN 1 -7.5543 -38.4703 PEADLPRSPGNLTER-p Q9H0F6;S165-p PEADLPRSPGNLTER 0.260386657049657 0.0373757703315101 0.424666666666667 -0.338 11.0800076206101 19.1794815877548 0.424666666666667 -0.338 0.0779828742148509 0.0120795801903744 2.17013195050919 -3.70174504030272 Q9H0F6 SHARPIN Q9H0F6.S165.p_SHARPIN Q9H0F6_S165s _1_1_165_165 Q9H0F6 Q9H0F6|Q9H0F6-2 Sharpin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18277.18277.4 8.11 3.71 8.112 3 1 1 0 785.4011 3058.6119 S165s TMT10 155 (K) GPPPEADLPRsPGNLTEREELAGSLAR (A) GPPPEADLPRS(0.99)PGNLT(0.0)EREELAGS(0.0)LAR s:Phosphorylated S SHARPIN 40519.1 2 4 2786.1 70.66 HUMAN 1 11.08 -19.1795 PEAEPTDSDSPPSSS-p O14976;S778-p PEAEPTDSDSPPSSS 0.993618410078581 0.198006553157887 0.00166666666666666 0.128666666666667 0.0569967288970414 9.25512723212409 0.00166666666666663 0.128666666666667 0.986961762108264 0.118709992292335 0.0171103375120092 1.85184908250906 O14976 GAK O14976.S778.p_GAK O14976_S778s _1_1_778_778 O14976 O14976|O14976-2 Cyclin-G-associated kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10313.10313.3 34.74 34.74 1.171 11 1 1 0 1201.5133 3522.5578 S778s TMT10 757 (R) QPGSTAQYDAGAGSPEAEPTDsDSPPSSSADASR (F) QPGS(0.0)T(0.0)AQY(0.0)DAGAGS(0.0)PEAEPT(0.0)DS(0.99)DS(0.0)PPS(0.0)S(0.0)S(0.0)ADAS(0.0)R s:Phosphorylated S GAK 144671.4 2 5 746.1 233.2 HUMAN 1 0.057 9.2551 PEAGELPSIGEATAA-p Q86UU1;S638-p PEAGELPSIGEATAA 0.666237759406465 0.226285393738345 0.0663333333333333 0.160333333333333 3.29788230093336 8.49872119902565 0.0663333333333333 0.160333333333333 0.4679632730851 0.141295353433357 0.780292541888964 1.72100340204387 Q86UU1 PHLDB1 Q86UU1.S638.p_PHLDB1 Q86UU1_S638s _1_1_638_638 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33209.33209.3 15.88 15.88 4.011 2 1 1 0 868.4405 2523.3252 S638s TMT10 627 (R) ADGGPEAGELPsIGEATAALALAGR (R) ADGGPEAGELPS(0.99)IGEAT(0.0)AALALAGR s:Phosphorylated S PHLDB1 152129.1 2 20 99.1 600.41 HUMAN 1 3.2979 8.4987 PEAHLPHSAAPARKA-p O00411;S749-p PEAHLPHSAAPARKA 0.251317265759343 0.917219758507361 0.245 0.0106666666666667 11.4443343975547 0.528491957230733 0.245 0.0106666666666667 0.0717078267023892 0.885423010459725 2.23414450465984 0.151015519982672 O00411 POLRMT O00411.S749.p_POLRMT O00411_S749s _1_1_749_749 O00411 O00411 DNA-directed RNA polymerase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16361.16361.4 19.75 20.58 3.91 2 1 1 0 837.1669 3265.6738 S749s TMT10 725 (K) GCPQLGVPAPPSEAPQPPEAHLPHsAAPAR (K) GCPQLGVPAPPS(0.0)EAPQPPEAHLPHS(0.99)AAPAR C:Carbamidomethylation,s:Phosphorylated S POLRMT 140386.6 1 1 5392.1 19.75 HUMAN 1 11.4443 0.5285 PEANSRASSPCPEFE-p O60333-2;S1612-p PEANSRASSPCPEFE 0.128918631797654 0.0264325817251409 0.316 -0.342333333333333 18.4225171576729 21.4245161882813 0.316 -0.342333333333333 0.0143796489657754 0.00720357995920823 3.54828503701581 -4.18727752557007 O60333 KIF1B O60333.2.S1612.p_KIF1B O60333-2_S1612sS1613s_2_2_1612_1613 O60333-2 O60333-4|Q4R9M9|A0A087WWA3|O60333-2 Isoform 2 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28383.28383.5 8.46 8.46 8.464 8 2 2 0 977.467 4722.3874 N1608n S1612s S1613s TMT10 1597 (R) SNSLDQKTPEAnSRAssPCPEFEQFQIVPAVETPYLAR (A) S(0.0)N(0.0)S(0.0)LDQKT(0.0)PEAN(0.99)S(0.0)RAS(0.99)S(0.99)PCPEFEQFQIVPAVET(0.0)PY(0.0)LAR K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S KIF1B 200628.3 4 14 606.1 262.24 HUMAN 1 18.4225 -21.4245 PEAPRRRSPSPTPTP-p P49450;S17-p PEAPRRRSPSPTPTP 0.201994258111477 0.272942120302974 0.233333333333333 0.127 13.4913389457977 7.42885782723442 0.233333333333333 0.127 0.0447575293800175 0.180764946627056 2.59999198947725 1.53544255300576 P49450 CENPA P49450.S17.p_CENPA P49450_S17s _1_1_17_17 P49450 P49450|P49450-2|F8WD88 Histone H3-like centromeric protein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3227.3227.3 7.08 7.08 1.2 5 1 1 0 601.3141 1721.9608 S17s TMT10 15 (R) RRsPSPTPTPGPSR (R) RRS(0.99)PS(0.0)PT(0.0)PT(0.0)PGPS(0.0)R s:Phosphorylated S CENPA 16047.3 3 1 4964.1 24.57 HUMAN 1 13.4913 7.4289 PEAQAQRSPRPTGSD-p Q8N1F8;S610-p PEAQAQRSPRPTGSD 0.175566091093158 0.694510202335743 -0.314666666666667 -0.066 15.0237611967943 2.17417218479534 -0.314666666666667 -0.066 0.0314502339445758 0.60615372938471 -2.88290879366764 -0.546971736134756 Q8N1F8 STK11IP Q8N1F8.S610.p_STK11IP Q8N1F8_S610s _1_1_610_610 Q8N1F8 Q8N1F8 Serine/threonine-protein kinase 11-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31019.31019.5 27.05 27.05 4.632 6 1 1 0 973.1219 4781.5999 S610s TMT10 587 (R) TLERLELQSLEAAEIEPEAQAQRsPRPTGSDLLPGAPILSLR (F) T(0.0)LERLELQS(0.0)LEAAEIEPEAQAQRS(0.99)PRPT(0.0)GS(0.0)DLLPGAPILS(0.0)LR s:Phosphorylated S STK11IP 122825.3 5 8 813.1 220.97 HUMAN 1 -15.0238 -2.1742 PEARCRGTPEAPPRG-p Q8N3D4;T454-p PEARCRGTPEAPPRG 0.468065510489932 0.0739209332425326 0.165666666666667 -0.219666666666667 6.08864401332276 15.0162319330797 0.165666666666667 -0.219666666666667 0.24611359184404 0.0315048057843419 1.30033941884606 -2.87961447636048 Q8N3D4 EHBP1L1 Q8N3D4.T454.p_EHBP1L1 Q8N3D4_T454t _1_1_454_454 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3413.3413.4 11.38 11.38 8.587 2 1 1 0 484.4856 1854.9554 T454t TMT10 451 (R) CRGtPEAPPRGSQGR (L) CRGT(0.99)PEAPPRGS(0.0)QGR C:Carbamidomethylation,t:Phosphorylated T EHBP1L1 162650.3 2 5 593.1 264.13 HUMAN 1 6.0886 -15.0162 PEARGRRSPILLPKG-p Q8TD16;S582-p PEARGRRSPILLPKG 0.544875226934981 0.0406223783491287 -0.0993333333333333 -0.247333333333333 4.8691521189834 18.649353981514 -0.0993333333333334 -0.247333333333333 0.325900320903937 0.0136478613513886 -1.08002409824642 -3.59181996272822 Q8TD16 BICD2 Q8TD16.S582.p_BICD2 Q8TD16_S582s _1_1_582_582 Q8TD16 Q8TD16-2 Protein bicaudal D homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21702.21702.2 11.76 3.94 99 1 1 1 0 653.4022 1225.8284 S582s TMT10 582 (R) sPILLPK (G) S(1.0)PILLPK K:TMT10,s:Phosphorylated S BICD2 93759.7 12 7 1471.1 139.55 HUMAN 1 -4.8692 -18.6494 PEASATNSPCTSKPA-p Q12873-3;S1608-p PEASATNSPCTSKPA 0.0412311366109555 0.00397968849257063 -0.504333333333333 -0.650333333333333 30.8812873721339 35.3834518982056 -0.504333333333333 -0.650333333333334 0.00081634034903511 0.000289504161014335 -6.70480333857064 -8.23645211083373 Q12873 CHD3 Q12873.3.S1608.p_CHD3 Q12873-3_S1608s _1_1_1608_1608 Q12873-3 Q12873-3|Q12873-2 Isoform 3 of Chromodomain-helicase-DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11175.11175.4 28.85 28.05 1.12 11 1 1 0 871.439 3402.7666 S1608s TMT10 1596 (K) TSPTTPEASATNsPCTSKPATPAPSEK (G) T(0.0)S(0.0)PT(0.0)T(0.0)PEAS(0.0)AT(0.0)NS(0.99)PCT(0.0)S(0.0)KPAT(0.0)PAPS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CHD3 234573.2 5 51 49.3 753.68 HUMAN 1 -30.8813 -35.3835 PEASISGSKGDLKSS-p Q09666;S5739-p PEASISGSKGDLKSS 0.0512543211239701 0.0256601056912358 -0.873333333333333 0.445333333333333 28.253414118016 21.6394222849164 -0.873333333333333 0.445333333333333 0.00149505988298531 0.00685579418776204 -5.91782689571206 4.23557322457421 Q09666 AHNAK Q09666.S5739.p_AHNAK Q09666_S5739s _1_1_5739_5739 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11066.11066.3 17.68 17.68 1.122 5 1 1 0 762.7505 2206.2646 S5739s TMT10 5724 (K) GKGGVTGSPEASISGsK (G) GKGGVT(0.0)GS(0.0)PEAS(0.0)IS(0.0)GS(0.99)K K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 156 1.1 4313.36 HUMAN 1 -28.2534 21.6394 PEASQTDSPVESPRL-p O95049-3;S346-p PEASQTDSPVESPRL 0.373391412512094 0.0223678106910793 0.127 0.363 7.92763081673415 22.544110349772 0.127 0.363 0.161152452171082 0.00556658653845995 1.62260393012509 4.44262649792196 O95049 TJP3 O95049.3.S346.p_TJP3 O95049-3_T344tS346s_2_2_344_346 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7550.7550.3 11.73 11.73 2.158 5 2 2 0 659.2811 1815.8922 T344t S346s TMT10 338 (R) SPEASQtDsPVESPR (L) S(0.0)PEAS(0.0)QT(0.99)DS(0.99)PVES(0.0)PR t:Phosphorylated T,s:Phosphorylated S TJP3 103593.6 6 26 125.1 544.41 HUMAN 2 7.9276 22.5441 PEDDDANSYENVLIC-p Q9GZY6;S135-p PEDDDANSYENVLIC 0.367764715604621 0.894955643738516 0.138333333333333 -0.0166666666666667 8.05853957527898 0.676597637353053 0.138333333333333 -0.0166666666666666 0.156367337884821 0.855736854240133 1.64531417333787 -0.190647578990227 Q9GZY6 LAT2 Q9GZY6.S135.p_LAT2 Q9GZY6_S135s _1_1_135_135 Q9GZY6 Q9GZY6 Linker for activation of T-cells family member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22681.22681.5 18.71 18.71 4.742 3 1 1 0 622.511 3028.5541 S135s TMT10 124 (R) FSKPPEDDDANsYENVLICK (Q) FS(0.0)KPPEDDDANS(0.99)Y(0.0)ENVLICK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S LAT2 26835 4 2 3908.1 40.93 HUMAN 1 8.0585 -0.6766 PEDGSDVSPGPNSED-p Q96JN0-3;S1277-p PEDGSDVSPGPNSED 0.796323249979386 0.380728624405919 -0.0423333333333334 0.142333333333333 1.90777625251447 5.57372509718268 -0.0423333333333334 0.142333333333333 0.64449918833146 0.277094234992044 -0.488280163716147 1.20796644254088 Q96JN0 LCOR Q96JN0.3.S1277.p_LCOR Q96JN0-3_S1274sS1277s_2_2_1274_1277 Q96JN0-3 Q96JN0-3 Isoform 3 of Ligand-dependent corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18149.18149.4 18.02 15.97 4.941 4 2 2 0 1080.7316 4159.958 S1274s S1277s TMT10 1261 (K) FRENPDQVEPEDGsDVsPGPNSEDSIEEVKEDR (N) FRENPDQVEPEDGS(0.99)DVS(0.99)PGPNS(0.0)EDS(0.0)IEEVKEDR K:TMT10,s:Phosphorylated S LCOR 172300.7 2 19 673.1 247.79 HUMAN 1 -1.9078 5.5737 PEDPRRASPPDPSPS-p Q9Y2F5;S1692-p PEDPRRASPPDPSPS 0.754195374913311 0.412477812939102 -0.0596666666666667 0.148666666666667 2.34143485116001 5.11527946143984 -0.0596666666666667 0.148666666666667 0.583252373617006 0.307944217802805 -0.583154513208494 1.1249104747914 Q9Y2F5 ICE1 Q9Y2F5.S1692.p_ICE1 Q9Y2F5_S1692s _1_1_1692_1692 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6366.6366.3 14.59 14.59 3.307 6 1 1 0 726.0124 2096.057 S1692s TMT10 1690 (R) RAsPPDPSPSPSAASASER (V) RAS(0.99)PPDPS(0.0)PS(0.0)PS(0.0)AAS(0.0)AS(0.0)ER s:Phosphorylated S ICE1 250910.2 2 17 216.1 433.09 HUMAN 1 -2.3414 5.1153 PEDVHVQSPLSKFRS-p Q9BQF6-5;S46-p PEDVHVQSPLSKFRS 0.883338459645445 0.081564155697089 -0.025 -0.196666666666667 1.06405526010482 14.4315273162316 -0.025 -0.196666666666667 0.782698450386572 0.0360451857899783 -0.28986972620346 -2.77077332990604 Q9BQF6 SENP7 Q9BQF6.5.S46.p_SENP7 Q9BQF6-5_S46s _1_1_46_46 Q9BQF6-5 Q9BQF6|Q9BQF6-2|J3QT09|Q9BQF6-5|Q9BQF6-4 Isoform 5 of Sentrin-specific protease 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17106.17106.3 7.46 7.46 1.454 2 1 1 0 887.4789 2580.4787 S46s TMT10 34 (K) MLNAKPEDVHVQsPLSK (F) MLNAKPEDVHVQS(0.99)PLS(0.0)K K:TMT10,s:Phosphorylated S SENP7 113127.1 1 4 1683.1 121.31 HUMAN 1 -1.0641 -14.4315 PEEAQKVSPVLGPAD-p A0A087WZY3;S1219-p PEEAQKVSPVLGPAD 0.37550402812562 0.981649370095886 -0.134333333333333 0.00300000000000003 7.86602681827286 0.115641489102154 -0.134333333333333 0.00300000000000005 0.163454664361934 0.97372394757316 -1.61191094896125 0.0344855396634591 A0A087WZY3 NotFound A0A087WZY3.S1219.p_NotFound A0A087WZY3_S1219s _1_1_1219_1219 A0A087WZY3 A0A087WZY3 Alstrom syndrome protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21730.21730.5 19.37 19.97 6.31 4 1 1 0 917.8925 4505.5214 S1219s TMT10 1196 (R) EKPGIFYQQTLPGSHIPEEAQKVsPVLGPADQK (T) EKPGIFY(0.0)QQT(0.0)LPGS(0.0)HIPEEAQKVS(0.99)PVLGPADQK K:TMT10,s:Phosphorylated S ALMS1 463449.8 1 3 1397.1 146.67 HUMAN 1 -7.866 0.1156 PEEDFRHSPEEDFRQ-p Q8IXT5;S710-p PEEDFRHSPEEDFRQ 0.0767901617046939 0.0237710721023097 0.405666666666667 0.584 23.8861378871833 22.1447215782817 0.405666666666667 0.584 0.00408682659871436 0.00610278179695986 4.76708949652324 4.3504625756741 Q8IXT5 RBM12B Q8IXT5.S710.p_RBM12B Q8IXT5_S710s _1_1_710_710 Q8IXT5 Q8IXT5 RNA-binding protein 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8049.8049.5 24.8 24.8 7.022 2 1 1 0 627.2799 3052.4045 S710s Hydrogen 701 (R) RPPEEDFRHsPEEDFRQSPQEHFR (R) RPPEEDFRHS(0.99)PEEDFRQS(0.0)PQEHFR s:Phosphorylated S RBM12B 118442.9 5 10 384.1 333.8 HUMAN 1 23.8861 22.1447 PEEDFRQSPQEHFRR-p Q8IXT5;S718-p PEEDFRQSPQEHFRR 0.351190154360268 0.666982471587475 0.190666666666667 0.120666666666667 8.44597995075664 2.4071387701559 0.190666666666667 0.120666666666667 0.143021722733187 0.574494827685129 1.71245209612638 0.597115689776073 Q8IXT5 RBM12B Q8IXT5.S718.p_RBM12B Q8IXT5_S718s _1_1_718_718 Q8IXT5 Q8IXT5 RNA-binding protein 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7084.7084.4 9.21 9.21 2.476 2 1 1 0 584.5176 2255.0791 S718s TMT10 709 (R) HSPEEDFRQsPQEHFR (R) HS(0.0)PEEDFRQS(0.99)PQEHFR s:Phosphorylated S RBM12B 118442.9 2 11 384.1 333.8 HUMAN 1 8.446 2.4071 PEEFETDSDQQDITN-p Q6ZUT1;S125-p PEEFETDSDQQDITN 0.982842045127411 0.0831776836997244 0.00333333333333332 0.247 0.148484101303213 14.2975052522919 0.00333333333333332 0.247 0.966388136527909 0.0371748713948999 0.0441239193553862 2.74601653244747 Q6ZUT1 C11orf57 Q6ZUT1.S125.p_C11orf57 Q6ZUT1_T123tS125s_2_2_123_125 Q6ZUT1 Q6ZUT1 Uncharacterized protein NKAPD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21369.21369.5 19.66 19.66 6.84 4 2 2 0 667.5143 3173.6093 T123t S125s TMT10 115 (K) ELYPEEFEtDsDQQDITNGKK (T) ELY(0.0)PEEFET(0.99)DS(0.99)DQQDIT(0.0)NGKK K:TMT10,t:Phosphorylated T,s:Phosphorylated S NKAPD1 34109.2 4 1 1271.2 159.85 HUMAN 1 0.1485 14.2975 PEEFETDSSDQQDIT-p Q6ZUT1-2;S125-p PEEFETDSSDQQDIT 0.659829317652971 0.0199082106229544 0.0593333333333333 0.319666666666667 3.38277909205636 23.3281803060328 0.0593333333333333 0.319666666666667 0.458904261619996 0.00464709947913568 0.797142206442227 4.62716207474301 Q6ZUT1 C11orf57 Q6ZUT1.2.S125.p_C11orf57 Q6ZUT1-2_S125sS126s_2_2_125_126 Q6ZUT1-2 Q6ZUT1-2|Q6ZUT1-3 Isoform 2 of Uncharacterized protein NKAPD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24940.24940.3 19.1 19.1 2.233 5 2 2 0 1021.7798 2903.3835 S125s S126s TMT10 115 (K) ELYPEEFETDssDQQDITNGK (K) ELY(0.0)PEEFET(0.0)DS(0.99)S(0.99)DQQDIT(0.0)NGK K:TMT10,s:Phosphorylated S NKAPD1 34196.3 9 9 1271.1 159.85 HUMAN 1 3.3828 23.3282 PEEGCQGSPQRRGPL-p O43237;S194-p PEEGCQGSPQRRGPL 0.572856698662497 0.457655910981217 0.0783333333333333 -0.0733333333333333 4.45236277276227 4.52555639085231 0.0783333333333334 -0.0733333333333333 0.358726716801428 0.352731593964465 1.00267026323888 -1.0161594341226 O43237 DYNC1LI2 O43237.S194.p_DYNC1LI2 O43237_S194s _1_1_194_194 O43237 O43237|B4E2E0 Cytoplasmic dynein 1 light intermediate chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20514.20514.4 17.93 17.93 10.479 2 1 1 0 861.4172 3362.6753 S194s TMT10 176 (R) KFVKDFQDYMEPEEGCQGsPQR (R) KFVKDFQDY(0.0)MEPEEGCQGS(0.99)PQR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DYNC1LI2 54383.6 14 3 576.1 267.98 HUMAN 1 4.4524 -4.5256 PEEGEKQSQC_____-p A0A087X111;S115-p PEEGEKQSQC_____ 0.586376471030289 0.0320849526179946 0.136 0.998 4.26505000048878 20.1592497147884 0.136 0.998 0.374537234949856 0.00963995548680572 0.967467072700663 3.90951519002155 A0A087X111 GAGE13 A0A087X111.S115.p_GAGE13 A0A087X111_S115s _1_1_115_115 A0A087X111 A1L429|A6NDE8|A0A087X111|Q13069 G antigen 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6383.6383.3 11.68 11.68 11.675 2 1 1 0 610.9503 1750.8682 S115s TMT10 107 (K) TPEEGEKQsQC (-) T(0.0)PEEGEKQS(0.99)QC K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GAGE13 13127.7 1 2 2911.1 66.12 HUMAN 1 4.2651 20.1592 PEEIYRYSRSLEELL-p A0A0G2JPP5;S35-p PEEIYRYSRSLEELL 0.678817626765682 0.757674682818682 -0.0606666666666667 0.0553333333333334 3.14924646232057 1.66475437796241 -0.0606666666666667 0.0553333333333334 0.484256382875784 0.681592122145272 -0.750566292417323 0.433162120394076 A0A0G2JPP5 SCRIB A0A0G2JPP5.S35.p_SCRIB A0A0G2JPP5_S35s _1_1_35_35 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13966.13966.4 19.08 15.57 8.648 4 1 1 0 580.0293 2237.1335 S35s TMT10 21 (R) HCSLQAVPEEIYRYsR (S) HCS(0.0)LQAVPEEIY(0.0)RY(0.0)S(0.99)R C:Carbamidomethylation,s:Phosphorylated S SCRIB 178690.9 13 6 22.1 1004.81 HUMAN 1 -3.1492 1.6648 PEELAAPSPAALADY-p O15231-9;S39-p PEELAAPSPAALADY 0.991883667014353 0.0176032432582518 -0.00166666666666668 0.366 0.0744211970785672 24.1710844627295 -0.00166666666666668 0.366 0.983009874221074 0.00382729161320352 -0.0222973780637362 4.83108439990127 O15231 ZNF185 O15231.9.S39.p_ZNF185 O15231-9_S39s _1_1_39_39 O15231-9 O15231-9 Isoform 9 of Zinc finger protein 185 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26166.26166.3 13.72 13.72 10.486 3 1 1 0 918.1358 2672.4183 S39s TMT10 28 (R) ITNGPEELAAPsPAALADYEGK (D) IT(0.0)NGPEELAAPS(0.99)PAALADY(0.0)EGK K:TMT10,s:Phosphorylated S ZNF185 35752.1 1 25 166.4 494.62 HUMAN 1 -0.0744 24.1711 PEELAPVTPMEVYPE-p O14686-3;T1164-p PEELAPVTPMEVYPE 0.438869804422212 0.120732779557619 0.127 0.177333333333333 6.58766586621546 12.1051231886457 0.127 0.177333333333333 0.219398378425785 0.0615868059626002 1.38862515061149 2.34980991261216 O14686 KMT2D O14686.3.T1164.p_KMT2D O14686-3_T1164t _1_1_1164_1164 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.33381.33381.4 19.25 17.41 6.435 3 1 1 0 802.9038 3128.63 T1164t TMT10 1150 (K) GSPVLLDPEELAPVtPMEVYPECK (Q) GS(0.0)PVLLDPEELAPVT(0.99)PMEVY(0.0)PECK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T KMT2D 600227.3 3 6 17.1 1042.08 HUMAN 1 6.5877 12.1051 PEENRADSQDEKSQT-p Q12774;S340-p PEENRADSQDEKSQT 0.893219546514556 0.575350824670453 0.0296666666666667 0.106333333333333 0.959412854454406 3.23743133420871 0.0296666666666667 0.106333333333333 0.801786453787117 0.474522562042492 0.263666352571736 0.768125352296291 Q12774 ARHGEF5 Q12774.S340.p_ARHGEF5 Q12774_S340s _1_1_340_340 Q12774 Q12774|A5YM69 Rho guanine nucleotide exchange factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8645.8645.3 7.12 7.12 99 1 1 1 0 732.6724 2116.0356 S340s Hydrogen 329 (R) ELQVPEENRADsQDEK (S) ELQVPEENRADS(1.0)QDEK K:TMT10-Lys-Only,s:Phosphorylated S ARHGEF5 177994.4 1 9 487.1 295.28 HUMAN 1 0.9594 3.2374 PEEPAAPSPEPRVWL-p O94819;S107-p PEEPAAPSPEPRVWL 0.857564991790625 0.266079788539843 0.0273333333333333 0.131666666666667 1.30104280301096 7.57066723730202 0.0273333333333333 0.131666666666667 0.741132263504218 0.174957786796351 0.347775702623777 1.56011432612532 O94819 KBTBD11 O94819.S107.p_KBTBD11 O94819_S107s _1_1_107_107 O94819 O94819 Kelch repeat and BTB domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9190.9190.2 11.06 11.06 99 1 1 1 0 908.9163 1736.8475 S107s TMT10 98 (R) ACPEEPAAPsPEPR (V) ACPEEPAAPS(1.0)PEPR C:Carbamidomethylation,s:Phosphorylated S KBTBD11 66745.6 2 1 6544.1 11.06 HUMAN 1 1.301 7.5707 PEEPAPESPQVPEAP-p Q99576-3;S188-p PEEPAPESPQVPEAP 0.732651492896551 0.725960335257488 -0.053 0.0436666666666667 2.56102068573547 1.91443201444062 -0.053 0.0436666666666667 0.554495379265024 0.643512220274855 -0.629747792207386 0.489711915149779 Q99576 TSC22D3 Q99576.3.S188.p_TSC22D3 Q99576-3_S188s _1_1_188_188 Q99576-3 Q99576-3|E7EWD5|Q99576-4|Q5JRJ0|Q5JRJ2 Isoform 2 of TSC22 domain family protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25123.25123.3 13.86 13.86 5.963 4 1 1 0 992.7881 2896.3872 S188s TMT10 175 (K) FQSCLSPEEPAPEsPQVPEAPGGSAV (-) FQS(0.0)CLS(0.0)PEEPAPES(0.99)PQVPEAPGGS(0.0)AV C:Carbamidomethylation,s:Phosphorylated S TSC22D3 22669.2 2 6 2467.1 82.09 HUMAN 1 -2.561 1.9144 PEEPKVLTPEEQLAD-p O75822;T109-p PEEPKVLTPEEQLAD 0.490994191758214 0.0549350907862547 -0.103333333333333 -0.235666666666667 5.6894058530917 16.7924617697127 -0.103333333333333 -0.235666666666667 0.269810852835935 0.0209292575834318 -1.22902986442106 -3.21945353179151 O75822 EIF3J O75822.T109.p_EIF3J O75822_T109t _1_1_109_109 O75822 O75822 Eukaryotic translation initiation factor 3 subunit J HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20073.20073.5 17.29 11.43 99 1 1 1 0 678.1779 3306.8876 T109t TMT10 98 (K) RLEEPEEPKVLtPEEQLADKLR (L) RLEEPEEPKVLT(1.0)PEEQLADKLR K:TMT10,t:Phosphorylated T EIF3J 29176 11 2 1085.1 179.66 HUMAN 1 -5.6894 -16.7925 PEEPSAPSPTLPAQF-p A0A0C4DFX9;S374-p PEEPSAPSPTLPAQF 0.382597861387019 0.0292918931164772 0.132 0.282333333333333 7.72250135898074 20.7520211170348 0.132 0.282333333333333 0.168946758698362 0.00841003664782456 1.5869818665023 4.03827186484348 A0A0C4DFX9 NELFA A0A0C4DFX9.S374.p_NELFA A0A0C4DFX9_S374s _1_1_374_374 A0A0C4DFX9 A0A0C4DFX9|Q9H3P2|Q9H3P2-7 Negative elongation factor A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18020.18020.3 19.21 14.69 1.225 4 1 1 0 925.4785 2694.4503 S374s TMT10 362 (R) EASRPPEEPSAPsPTLPAQFK (Q) EAS(0.0)RPPEEPS(0.0)APS(0.99)PT(0.0)LPAQFK K:TMT10,s:Phosphorylated S NELFA 58726.5 4 8 1015.1 188.17 HUMAN 1 7.7225 20.752 PEEPVRNSLLDDAKA-p P0C024;S14-p PEEPVRNSLLDDAKA 0.839821885609699 0.0513465149183913 -0.0293333333333333 -0.244 1.46461925441156 17.2132296471619 -0.0293333333333333 -0.244 0.713736775619695 0.0189966506148611 -0.386679211836932 -3.30219510123211 P0C024 NUDT7 P0C024.S14.p_NUDT7 P0C024_S14s _1_1_14_14 P0C024 P0C024|A0A087WVP7|P0C024-2|P0C024-3|H3BRQ8 Peroxisomal coenzyme A diphosphatase NUDT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23751.23751.3 15.71 15.71 99 1 1 1 0 802.1046 2324.3226 S14s TMT10 4 (R) LGLPEEPVRNsLLDDAK (A) LGLPEEPVRNS(1.0)LLDDAK K:TMT10,s:Phosphorylated S NUDT7 27169.8 1 1 5869.1 15.71 HUMAN 1 -1.4646 -17.2132 PEERSLPSDLAFNGD-p Q9C0C2;S247-p PEERSLPSDLAFNGD 0.988584981739742 0.0788420855652697 -0.00233333333333334 -0.281 0.1026450637724 14.6448743051158 -0.00233333333333335 -0.281 0.97664221736107 0.0343172571861982 -0.0306567965323493 -2.81032776771614 Q9C0C2 TNKS1BP1 Q9C0C2.S247.p_TNKS1BP1 Q9C0C2_S247s _1_1_247_247 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26571.26571.3 15.24 15.24 2.365 2 1 1 0 662.6835 1906.0686 S247s TMT10 244 (R) SLPsDLAFNGDLAK (A) S(0.0)LPS(0.99)DLAFNGDLAK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 1 8 4.1 2105.7 HUMAN 1 -0.1026 -14.6449 PEETAFQTPKSSQMP-p Q9BTX1;T414-p PEETAFQTPKSSQMP 0.622172474425454 0.0054867187577044 -0.078 -0.560333333333333 3.8297634066789 32.7931767874367 -0.078 -0.560333333333333 0.41402222915329 0.000525632634742833 -0.884445604465245 -7.31603190078643 Q9BTX1 NDC1 Q9BTX1.T414.p_NDC1 Q9BTX1_T414t _1_1_414_414 Q9BTX1 Q9BTX1|Q9BTX1-2|Q9BTX1-5|Q9BTX1-6|Q9BTX1-4 Nucleoporin NDC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14372.14372.3 15.75 15.75 4.518 3 1 1 0 786.4299 2277.3058 T414t TMT10 403 (K) KLNSPEETAFQtPK (S) KLNS(0.0)PEET(0.0)AFQT(0.99)PK K:TMT10,t:Phosphorylated T NDC1 76988 3 4 1059.1 182.55 HUMAN 1 -3.8298 -32.7932 PEETKAASPVLQEDI-p P18887;S461-p PEETKAASPVLQEDI 0.391150856817222 0.00679097043458799 -0.147 0.486 7.52952684511173 31.1200534747303 -0.147 0.486 0.176623023734886 0.000772671071129201 -1.55342210239483 6.76901413528997 P18887 XRCC1 P18887.S461.p_XRCC1 P18887_S461s _1_1_461_461 P18887 P18887|F5H8D7 DNA repair protein XRCC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20908.20908.4 28.17 28.17 20.33 4 1 1 0 1039.2183 4073.8857 S461s TMT10 459 (K) AAsPVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRR (V) AAS(0.99)PVLQEDIDIEGVQS(0.0)EGQDNGAEDS(0.0)GDT(0.0)EDELRR s:Phosphorylated S XRCC1 69817.6 5 10 433.1 315.31 HUMAN 1 -7.5295 31.1201 PEETRRNSLGGDVLF-p Q9H0D6;S678-p PEETRRNSLGGDVLF 0.950757974280079 0.112060385404853 0.0143333333333333 0.169 0.432449375643028 12.5460673992409 0.0143333333333333 0.169 0.905221921167714 0.055640786477394 0.12475397620595 2.42830624787327 Q9H0D6 XRN2 Q9H0D6.S678.p_XRN2 Q9H0D6_S678s _1_1_678_678 Q9H0D6 Q9H0D6|Q9H0D6-2 5'-3' exoribonuclease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26041.26041.3 15.63 15.63 99 1 1 1 0 581.9861 1663.9783 S678s TMT10 677 (R) NsLGGDVLFVGK (H) NS(1.0)LGGDVLFVGK K:TMT10,s:Phosphorylated S XRN2 109493.4 7 8 608.1 262.16 HUMAN 1 0.4324 12.5461 PEETSSNSDPPSPPV-p O60293;S651-p PEETSSNSDPPSPPV 0.283283360364086 0.134017982342126 0.151333333333333 0.216 10.3479485435716 11.5045336857986 0.151333333333333 0.216 0.0923007320825309 0.0707207131423763 2.04223119583649 2.24368254632487 O60293 ZFC3H1 O60293.S651.p_ZFC3H1 O60293_S651sS655s_2_2_651_655 O60293 O60293|O60293-2 Zinc finger C3H1 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13960.13960.5 12.23 8.92 1.157 6 2 2 0 735.7609 3514.8443 S651s S655s TMT10 640 (K) RAFKPEETSSNsDPPsPPVLNNSHPVPR (S) RAFKPEET(0.0)S(0.0)S(0.0)NS(0.99)DPPS(0.99)PPVLNNS(0.0)HPVPR K:TMT10,s:Phosphorylated S ZFC3H1 228291.3 5 22 311.1 371.67 HUMAN 1 10.3479 11.5045 PEFCSSPSPPVEVKI-p Q68E01;S502-p PEFCSSPSPPVEVKI 0.775106158812795 0.0199037089525882 -0.061 0.479333333333333 2.12018264614242 23.3314859152376 -0.061 0.479333333333333 0.613736193437946 0.00464356371002577 -0.535255861884797 4.62795041239669 Q68E01 INTS3 Q68E01.S502.p_INTS3 Q68E01_S502s _1_1_502_502 Q68E01 Q68E01|Q68E01-2|Q68E01-3|Q68E01-4 Integrator complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22215.22215.3 16.7 16.7 3.085 3 1 1 0 911.1396 2651.4358 S502s TMT10 492 (R) EKFPEFCSSPsPPVEVK (I) EKFPEFCS(0.0)S(0.0)PS(0.99)PPVEVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S INTS3 119608.2 4 1 1627.1 125.71 HUMAN 1 -2.1202 23.3315 PEFDVNLSKANVDIS-p Q09666;S1023-p PEFDVNLSKANVDIS 0.897783336973234 0.543408214995881 0.025 0.065 0.918797277654558 3.5611676941801 0.025 0.0650000000000001 0.809319998842716 0.440436426773064 0.253383685863448 0.832128517832739 Q09666 AHNAK Q09666.S1023.p_AHNAK Q09666_S1023s _1_1_1023_1023 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.28376.28376.3 14.9 14.9 10.419 3 1 1 0 950.5018 2769.51 S1023s TMT10 1006 (K) FSMPSLKGEGPEFDVNLsK (A) FS(0.0)MPS(0.0)LKGEGPEFDVNLS(0.99)K K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 44 1.1 4313.36 HUMAN 1 0.9188 3.5612 PEFEVENSPLSDVAK-p Q7Z4H7;S507-p PEFEVENSPLSDVAK 0.0900150447334028 0.00139766326720701 -0.408666666666667 -0.925666666666667 22.2671963642407 46.2573873681591 -0.408666666666667 -0.925666666666667 0.00593308217616969 2.3673434173426e-05 -4.38329919685987 -13.3385740910333 Q7Z4H7 HAUS6 Q7Z4H7.S507.p_HAUS6 Q7Z4H7_S507s _1_1_507_507 Q7Z4H7 Q7Z4H7|Q7Z4H7-3|Q5VY60|Q7Z4H7-2 HAUS augmin-like complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23999.23999.4 13.33 12.51 1.499 2 1 1 0 668.1161 2589.4743 S507s TMT10 498 (K) KIPEFEVENsPLSDVAK (N) KIPEFEVENS(0.99)PLS(0.0)DVAK K:TMT10,s:Phosphorylated S HAUS6 109703.4 1 3 1302.1 156.27 HUMAN 1 -22.2672 -46.2574 PEFRIEDSEPHIPLI-p P20020;S1193-p PEFRIEDSEPHIPLI 0.96472530859038 0.00413791477536262 -0.0113333333333333 0.602 0.302286005774697 35.0854623577576 -0.0113333333333334 0.602 0.932763190865725 0.000310065726938117 -0.0883671057248451 8.12572857278751 P20020 ATP2B1 P20020.S1193.p_ATP2B1 P20020_S1193s _1_1_1193_1193 P20020 P20020|P20020-4|P20020-3|P20020-6|E7ERY9 Plasma membrane calcium-transporting ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19108.19526.4 19.42 19.42 9.582 3 1 1 0 751.1026 2921.4214 S1193s Hydrogen 1190 (R) IEDsEPHIPLIDDTDAEDDAPTKR (N) IEDS(0.99)EPHIPLIDDT(0.0)DAEDDAPT(0.0)KR K:TMT10-Lys-Only,s:Phosphorylated S ATP2B1 139722.6 8 6 921.1 200.23 HUMAN 1 -0.3023 35.0855 PEGDVFGSQDISPEE-p Q9UNS1;S634-p PEGDVFGSQDISPEE 0.23918495849275 0.197603942344958 0.178 0.129666666666667 11.8756094946328 9.26607760872197 0.178 0.129666666666667 0.0649290502891949 0.118411051888345 2.31029044810158 1.85374392670483 Q9UNS1 TIMELESS Q9UNS1.S634.p_TIMELESS Q9UNS1_S634s _1_1_634_634 Q9UNS1 Q9UNS1 Protein timeless homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36136.36136.3 13.58 13.58 1.202 2 1 1 0 1094.88 3202.656 S634s TMT10 624 (R) EVWPEGDVFGsQDISPEEEIQLLK (Q) EVWPEGDVFGS(0.99)QDIS(0.0)PEEEIQLLK K:TMT10,s:Phosphorylated S TIMELESS 139682.8 1 2 579.1 266.89 HUMAN 1 11.8756 9.2661 PEGGLDDSGEHFFDA-p Q9NZN5;S1377-p PEGGLDDSGEHFFDA 0.145152146047681 0.683894793913048 0.314333333333333 0.049 17.0873417168186 2.25891126029412 0.314333333333333 0.049 0.0195553605813031 0.594441161332886 3.27985734345445 0.565337000055808 Q9NZN5 ARHGEF12 Q9NZN5.S1377.p_ARHGEF12 Q9NZN5_S1377s_1_1_1377_1377 Q9NZN5 Q9NZN5|Q9NZN5-2|E9PMR6 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33511.33511.5 14.76 11.06 1.118 6 1 1 0 1086.4825 5347.4199 N1352n S1377s TMT10 1339 (R) DSVGLAPQDSQASnILVMDHMIMTPEMPTMEPEGGLDDsGEHFFDAR (E) DS(0.0)VGLAPQDS(0.0)QAS(0.0)N(1.0)ILVM(0.0)DHM(0.0)IM(0.0)T(0.0)PEM(0.0)PT(0.0)M(0.0)EPEGGLDDS(0.99)GEHFFDAR n:Deamidated,s:Phosphorylated S ARHGEF12 174199.1 5 13 251.1 406.16 HUMAN 1 17.0873 2.2589 PEGPGPGSGDEANGP-p O15020;S2171-p PEGPGPGSGDEANGP 0.374297731091176 0.663746177847037 0.147 -0.042 7.90187792495656 2.43708464871896 0.147 -0.042 0.162110896497087 0.570547143178266 1.61813432697085 -0.603484392962588 O15020 SPTBN2 O15020.S2171.p_SPTBN2 O15020_S2171s _1_1_2171_2171 O15020 O15020|O15020-2|A4QPE4 Spectrin beta chain, non-erythrocytic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12187.12187.3 27.27 27.27 10.597 3 1 1 0 835.0411 2423.1425 S2171s TMT10 2158 (R) LEHSSFPEGPGPGsGDEANGPR (G) LEHS(0.0)S(0.0)FPEGPGPGS(0.99)GDEANGPR s:Phosphorylated S SPTBN2 272689.3 9 13 781.1 225.92 HUMAN 1 7.9019 -2.4371 PEGPRSPSPLMVVDN-p Q9C086;S99-p PEGPRSPSPLMVVDN 0.276181983641786 0.221067801202134 0.166333333333333 0.127333333333333 10.5702900155527 8.63053085604194 0.166333333333333 0.127333333333333 0.0876942258256863 0.137071420787823 2.08098737160041 1.74380699916534 Q9C086 INO80B Q9C086.S99.p_INO80B Q9C086_S97sS99s_2_2_97_99 Q9C086 J3KQ70|Q9C086|F8WCL7|B8ZZ93 INO80 complex subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34038.34445.4 28.51 28.51 3.514 6 2 2 0 1129.5339 4355.1777 S97s S99s TMT10 84 (K) SVPTFTVIPEGPRsPsPLMVVDNEEEPMEGVPLEQYR (A) S(0.0)VPT(0.0)FT(0.0)VIPEGPRS(0.99)PS(0.99)PLMVVDNEEEPMEGVPLEQY(0.0)R s:Phosphorylated S INO80B 39035.8 33 8 1391.1 147.13 HUMAN 1 10.5703 8.6305 PEGQSVDSDSESTVS-p Q15464;S310-p PEGQSVDSDSESTVS 0.787817207878045 0.471719947167064 -0.0413333333333333 0.0886666666666667 1.99933718836259 4.35000881200623 -0.0413333333333334 0.0886666666666667 0.63105364728913 0.367281555268576 -0.508655250962227 0.983292843421632 Q15464 SHB Q15464.S310.p_SHB Q15464_S307sS310s_2_2_307_310 Q15464 Q15464 SH2 domain-containing adapter protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24632.24632.3 18.27 18.27 1.2 9 2 2 0 1115.8171 3185.496 S307s S310s TMT10 293 (K) GIQLYDTPYEPEGQsVDsDSESTVSPR (L) GIQLY(0.0)DT(0.0)PY(0.0)EPEGQS(0.99)VDS(0.99)DS(0.0)ES(0.0)T(0.0)VS(0.0)PR s:Phosphorylated S SHB 55783 1 6 1825.1 112.53 HUMAN 1 -1.9993 4.35 PEGRKRYSDIFRSLD-p Q9P107;S19-p PEGRKRYSDIFRSLD 0.744474740122106 0.0896102900354047 -0.126 -0.613333333333333 2.43256553720313 13.8647217521518 -0.126 -0.613333333333333 0.571141142921603 0.0410702952332562 -0.602600241760388 -2.66653373910704 Q9P107 GMIP Q9P107.S19.p_GMIP Q9P107_S19s _1_1_19_19 Q9P107 Q9P107|Q9P107-2|K7ELE8 GEM-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14437.14437.3 7.37 3.63 3.629 2 1 1 0 422.5458 1185.6578 S19s TMT10 17 (K) RYsDIFR (S) RY(0.0)S(0.99)DIFR s:Phosphorylated S GMIP 107650.9 1 1 1251.1 161.9 HUMAN 1 -2.4326 -13.8647 PEGRSPLSAEELMTI-p A0A087X1R1;S664-p PEGRSPLSAEELMTI 0.92935232247217 0.0278402643015016 0.0156666666666667 -0.345666666666667 0.631114071556042 21.0798275292693 0.0156666666666667 -0.345666666666667 0.864746061808176 0.00779861080417026 0.17860286989237 -4.11050711139479 A0A087X1R1 SMTN A0A087X1R1.S664.p_SMTN A0A087X1R1_S664s _1_1_664_664 A0A087X1R1 A0A087X1R1|A0A087WVP4|P53814-6|P53814-5|P53814-2|B5MCI0 Smoothelin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24994.24994.5 17.27 11.73 1.192 3 1 1 0 739.7925 3614.9554 S664s TMT10 653 (R) VNKAPEGRSPLsAEELMTIEDEGVLDK (M) VNKAPEGRS(0.0)PLS(0.99)AEELMT(0.0)IEDEGVLDK K:TMT10,s:Phosphorylated S SMTN 108527.2 1 11 826.1 217.61 HUMAN 1 0.6311 -21.0798 PEGRTRRSIFENLMK-p Q13614;S174-p PEGRTRRSIFENLMK 0.490692853704506 0.337147497090287 -0.099 -0.135666666666667 5.69579630333245 6.2562050710716 -0.099 -0.135666666666667 0.269414130111615 0.236798797635889 -1.23017677138174 -1.32974970770073 Q13614 MTMR2 Q13614.S174.p_MTMR2 Q13614_S174s _1_1_174_174 Q13614 Q13614|Q13614-2 Myotubularin-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23679.23679.2 13.21 13.21 99 1 1 1 0 645.8224 1210.6703 S174s Hydrogen 174 (R) sIFENLMK (Y) S(1.0)IFENLMK K:TMT10-Lys-Only,s:Phosphorylated S MTMR2 73950.4 1 2 3764.1 43.62 HUMAN 1 -5.6958 -6.2562 PEGSASPTPPYLKWA-p O15169;T79-p PEGSASPTPPYLKWA 0.516670545513637 0.240860632253843 0.105666666666667 -0.201 5.29557871829159 8.14568521352483 0.105666666666667 -0.201 0.295421519886106 0.153260937793368 1.15795910816693 -1.6598877959622 O15169 AXIN1 O15169.T79.p_AXIN1 O15169_T79t _1_1_79_79 O15169 O15169|O15169-2 Axin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21419.21419.3 19.54 19.54 1.197 6 1 1 0 977.4894 2850.4926 T79t TMT10 63 (R) RSDLDLGYEPEGSASPtPPYLK (W) RS(0.0)DLDLGY(0.0)EPEGS(0.0)AS(0.0)PT(0.99)PPY(0.0)LK K:TMT10,t:Phosphorylated T AXIN1 96546.1 1 2 3085.1 61.16 HUMAN 1 5.2956 -8.1457 PEHRAFGSPFGLEEP-p Q9BQ24-2;S32-p PEHRAFGSPFGLEEP 0.417496528014681 0.011581893340601 -0.160666666666667 -0.427 7.00384352960628 27.0928669959493 -0.160666666666667 -0.427 0.199349727819926 0.00195304972392173 -1.46168598512547 -5.58637717264064 Q9BQ24 ZFYVE21 Q9BQ24.2.S32.p_ZFYVE21 Q9BQ24-2_S32s _1_1_32_32 Q9BQ24-2 Q9BQ24-2|G3V2M2|G3V5D6 Isoform 2 of Zinc finger FYVE domain-containing protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31503.31503.3 18.19 14.46 99 1 1 1 0 814.744 2362.2484 S32s TMT10 29 (R) AFGsPFGLEEPQWVPDK (E) AFGS(1.0)PFGLEEPQWVPDK K:TMT10,s:Phosphorylated S ZFYVE21 29218 1 2 4139.1 36.82 HUMAN 1 -7.0038 -27.0929 PEIEDVGSDEEEEKK-p P07900;S263-p PEIEDVGSDEEEEKK 0.171360536114766 0.00676066692759578 -0.593333333333333 0.519333333333333 15.2653480335561 31.1569851565364 -0.593333333333333 0.519333333333333 0.0297485085165947 0.000766128263508398 -2.9283671635315 6.78071249341182 P07900 HSP90AA1 P07900.S263.p_HSP90AA1 P07900_S263s _1_1_263_263 P07900 P07900-2 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11838.12623.5 21.81 17.85 16.044 2 1 1 0 813.2108 3982.0525 S263s TMT10 246 (K) EKEEKESEDKPEIEDVGsDEEEEK (K) EKEEKES(0.0)EDKPEIEDVGS(0.99)DEEEEK K:TMT10,s:Phosphorylated S HSP90AA1 85057.6 49 6 43.1 810.87 HUMAN 1 -15.2653 31.157 PEINKIRTPEKKPTE-p J3QS41;T1297-p PEINKIRTPEKKPTE 0.191100099896272 0.00574291920110371 -0.262 -0.583666666666667 14.0509931028745 32.4375057230741 -0.262 -0.583666666666667 0.0393460092496152 0.000570491827917706 -2.70228572019625 -7.19676994019113 J3QS41 HELZ J3QS41.T1297.p_HELZ J3QS41_T1297t _1_1_1297_1297 J3QS41 J3QS41|P42694 Probable helicase with zinc finger domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7860.7860.5 9 4.88 5.258 2 1 1 0 484.8943 2340.4785 T1297t TMT10 1295 (K) IRtPEKKPTEPK (Q) IRT(0.99)PEKKPT(0.0)EPK K:TMT10,t:Phosphorylated T HELZ 220821.8 3 8 466.1 303.39 HUMAN 1 -14.051 -32.4375 PEIQRLDT_______-p Q8IZR5-2;T208-p PEIQRLDT_______ 0.00861592953244037 0.000952253650599092 -1.797 -1.60166666666667 54.3414202127922 54.4350619329773 -1.797 -1.60166666666667 3.68008609230105e-06 3.6015861428196e-06 -18.9897926394796 -19.0008234537388 Q8IZR5 CMTM4 Q8IZR5.2.T208.p_CMTM4 Q8IZR5-2_T208t _1_1_208_208 Q8IZR5-2 Q8IZR5-2|Q8IZR5-3 Isoform 2 of CKLF-like MARVEL transmembrane domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10379.10379.3 9.75 9.75 9.752 2 1 1 0 618.3036 1772.934 T208t TMT10 196 (R) DVDSRPEIQRLDt (-) DVDS(0.0)RPEIQRLDT(0.99) t:Phosphorylated T CMTM4 23125.2 2 2 4362.1 32.75 HUMAN 1 -54.3414 -54.4351 PEKDGFPSGTPALNA-p Q13177;S152-p PEKDGFPSGTPALNA 0.0249456258107883 0.0140943537235631 -0.737333333333333 -0.367666666666667 37.1337637505926 25.6684914616786 -0.737333333333333 -0.367666666666667 0.000193474451870629 0.00271113319073008 -8.9326686841423 -5.20837362897754 Q13177 PAK2 Q13177.S152.p_PAK2 Q13177_S152s _1_1_152_152 Q13177 Q13177 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18923.18923.2 14.35 14.35 1.126 2 1 1 0 906.9698 1732.9634 S152s TMT10 148 (K) DGFPsGTPALNAK (G) DGFPS(0.99)GT(0.0)PALNAK K:TMT10,s:Phosphorylated S PAK2 58326.8 9 25 272.1 393.22 HUMAN 1 -37.1338 -25.6685 PEKDKEISPSVTKKN-p Q8N488;S99-p PEKDKEISPSVTKKN 0.279975887997309 0.992267747460299 -0.344 0.00133333333333335 10.4476002529198 0.0494639561469495 -0.344 0.00133333333333336 0.0902069449385471 0.988675117969723 -2.05959268749121 0.014860300254242 Q8N488 RYBP Q8N488.S99.p_RYBP Q8N488_S99s _1_1_99_99 Q8N488 Q8N488 RING1 and YY1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11544.11544.3 12.92 8.31 1.293 3 1 1 0 624.3552 1791.0831 S99s TMT10 95 (K) DKEIsPSVTK (K) DKEIS(0.99)PS(0.0)VT(0.0)K K:TMT10,s:Phosphorylated S RYBP 25049.3 11 1 2169.1 94.66 HUMAN 1 -10.4476 0.0495 PEKDRCTSPPGLSYM-p Q13796;S1297-p PEKDRCTSPPGLSYM 0.949984753800772 0.338643066759598 -0.011 0.142666666666667 0.441110568783494 6.23037422589035 -0.011 0.142666666666667 0.903418423908241 0.238211419684154 -0.127142916979873 1.32517422811547 Q13796 SHROOM2 Q13796.S1297.p_SHROOM2 Q13796_S1297s _1_1_1297_1297 Q13796 Q13796|F5H3B6 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19241.19241.2 11.18 7.29 1.104 4 1 1 0 889.936 1698.8959 S1297s TMT10 1295 (R) CTsPPGLSYMK (A) CT(0.0)S(0.99)PPGLS(0.0)Y(0.0)MK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SHROOM2 177605.1 7 24 90.1 622.62 HUMAN 1 -0.4411 6.2304 PEKEEEESDGEPEDS-p Q8IYB7;S875-p PEKEEEESDGEPEDS 0.692939428484277 0.340205481587476 -0.124 -0.142666666666667 2.98921855016875 6.20260482102763 -0.124 -0.142666666666667 0.502432986906564 0.23973945731078 -0.718221613031923 -1.32025270266966 Q8IYB7 DIS3L2 Q8IYB7.S875.p_DIS3L2 Q8IYB7_S875s _1_1_875_875 Q8IYB7 Q8IYB7 DIS3-like exonuclease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14215.14215.5 19.36 15.17 2.909 8 1 1 0 866.2244 4247.1195 S875s TMT10 853 (K) YSAILKRPGTQGHLGPEKEEEEsDGEPEDSSTS (-) Y(0.0)S(0.0)AILKRPGT(0.0)QGHLGPEKEEEES(0.99)DGEPEDS(0.0)S(0.0)T(0.0)S(0.0) K:TMT10,s:Phosphorylated S DIS3L2 100304.4 4 4 1919.1 107.1 HUMAN 1 -2.9892 -6.2026 PEKELPVSPGHRKTP-p Q16236;S433-p PEKELPVSPGHRKTP 0.156870667579318 0.00765716937935308 -0.258666666666667 -0.529 16.1382013133248 30.2085103043334 -0.258666666666667 -0.529 0.0243321154639797 0.000953123043557578 -3.09477154075814 -6.48544096658043 Q16236 NFE2L2 Q16236.S433.p_NFE2L2 Q16236_S433s _1_1_433_433 Q16236 Q16236|Q16236-2|Q16236-3 Nuclear factor erythroid 2-related factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8755.8755.3 10.97 10.97 99 1 1 1 0 434.2259 1220.6949 S433s TMT10 429 (K) ELPVsPGHR (K) ELPVS(1.0)PGHR s:Phosphorylated S NFE2L2 68167.6 5 2 4552.1 29.93 HUMAN 1 -16.1382 -30.2085 PEKKSTISASELSLA-p O60292;S1617-p PEKKSTISASELSLA 0.424703032265256 0.804736354592703 0.125 0.0393333333333333 6.85549076784753 1.3209354271304 0.125 0.0393333333333333 0.206277055390308 0.737745310010725 1.43569316562844 0.352514793596528 O60292 SIPA1L3 O60292.S1617.p_SIPA1L3 O60292_S1617s _1_1_1617_1617 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16790.16790.3 11.65 7.2 2.187 5 1 1 0 691.7048 1993.133 S1617s TMT10 1613 (K) KSTIsASELSLADGR (D) KS(0.0)T(0.0)IS(0.99)AS(0.0)ELS(0.0)LADGR K:TMT10,s:Phosphorylated S SIPA1L3 195918.6 1 24 144.1 520.25 HUMAN 1 6.8555 1.3209 PEKKTSTSPPPEKSG-p Q9H1E3;S223-p PEKKTSTSPPPEKSG 0.325611631944441 0.0014286003693118 -0.371666666666667 1.211 9.12477196756604 45.9539706433135 -0.371666666666667 1.211 0.122327134694855 2.53865062090033e-05 -1.82996377418179 13.1632891896144 Q9H1E3 NUCKS1 Q9H1E3.S223.p_NUCKS1 Q9H1E3_S223s _1_1_223_223 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.6778.7398.3 11.94 6.87 1.413 4 1 1 0 613.6798 1759.0569 S223s TMT10 219 (K) KTSTsPPPEK (S) KT(0.0)S(0.0)T(0.0)S(0.99)PPPEK K:TMT10,s:Phosphorylated S NUCKS1 27295.9 14 17 48.1 767.83 HUMAN 1 -9.1248 45.954 PEKQFLKSPKGSGKP-p Q969F2;S333-p PEKQFLKSPKGSGKP 0.515813402472715 0.0025545947445198 -0.147333333333333 -0.712666666666667 5.30848229683324 39.6184323943701 -0.147333333333333 -0.712666666666667 0.294545078317787 0.000109183436789789 -1.16030060529124 -9.96105229520812 Q969F2 NKD2 Q969F2.S333.p_NKD2 Q969F2_S333s _1_1_333_333 Q969F2 Q969F2 Protein naked cuticle homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13990.13990.3 8.14 8.14 99 1 1 1 0 538.9924 1534.9924 S333s TMT10 329 (K) QFLKsPK (G) QFLKS(1.0)PK K:TMT10,s:Phosphorylated S NKD2 50396.7 1 4 4076.1 38.12 HUMAN 1 -5.3085 -39.6184 PEKRKRNSVDSDLKS-p Q8IX21-2;S340-p PEKRKRNSVDSDLKS 0.040158294387081 0.00568315877546512 -0.563 -0.663333333333333 31.2670713312512 32.5323390495987 -0.563 -0.663333333333334 0.000746952296563964 0.000558169491451899 -6.8270897492363 -7.22840830179355 Q8IX21 SLF2 Q8IX21.2.S340.p_SLF2 Q8IX21-2_S340s _1_1_340_340 Q8IX21-2 Q8IX21-2|B1AL16 Isoform 2 of SMC5-SMC6 complex localization factor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5237.5237.3 10.35 10.35 3.587 2 1 1 0 567.3101 1619.9481 S340s Hydrogen 337 (R) KRNsVDSDLK (S) KRNS(0.99)VDS(0.0)DLK K:TMT10-Lys-Only,s:Phosphorylated S SLF2 134456.8 1 6 1220.1 164.91 HUMAN 1 -31.2671 -32.5323 PEKTTYDSAEEENKE-p Q9HAW4;S83-p PEKTTYDSAEEENKE 0.078227674708839 0.00101854180503129 -0.486666666666667 -1.63233333333333 23.6129808688073 51.9091325058559 -0.486666666666667 -1.63233333333333 0.00435213053785443 6.44297949830437e-06 -4.70084910512039 -17.0416419116092 Q9HAW4 CLSPN Q9HAW4.S83.p_CLSPN Q9HAW4_S83s _1_1_83_83 Q9HAW4 Q9HAW4|Q9HAW4-3|E7ESG2|Q9HAW4-2 Claspin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14719.14719.3 18.24 18.24 1.488 5 1 1 0 943.7994 2749.4135 S83s TMT10 79 (K) TTYDsAEEENKENLYAGK (N) T(0.0)T(0.0)Y(0.0)DS(0.99)AEEENKENLY(0.0)AGK K:TMT10,s:Phosphorylated S CLSPN 151718.8 3 1 506.1 289.61 HUMAN 1 -23.613 -51.9091 PELAGRDSPIRAEMP-p P86790;S266-p PELAGRDSPIRAEMP 0.573825603803224 0.731449533722293 -0.086 -0.034 4.43954381454184 1.87198454676743 -0.086 -0.034 0.359787125420564 0.649832675739636 -1.00027029559296 -0.480207218981045 P86790 CCZ1 P86790.S266.p_CCZ1 P86790_S266s _1_1_266_266 P86790 P86790 Vacuolar fusion protein CCZ1 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14548.14548.5 26.14 26.14 16.006 2 1 1 0 651.3252 3172.6272 S266s TMT10 256 (R) HIEPELAGRDsPIRAEMPGNLQHYGR (F) HIEPELAGRDS(0.99)PIRAEMPGNLQHY(0.0)GR s:Phosphorylated S CCZ1B 56321.6 6 1 3644.1 46.18 HUMAN 1 -4.4395 -1.872 PELCGPGSPPVLTPG-p Q13322;S150-p PELCGPGSPPVLTPG 0.0795581939180351 0.0352865835468948 -0.452333333333333 -0.511333333333333 23.4883004990689 19.5506410419692 -0.452333333333333 -0.511333333333333 0.00447888539668811 0.0110901110718777 -4.67081936151124 -3.77973400044331 Q13322 GRB10 Q13322.S150.p_GRB10 Q13322_S150s _1_1_150_150 Q13322 Q13322|Q13322-4|Q13322-2|Q13322-3 Growth factor receptor-bound protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35677.35677.3 16.39 17.37 2.853 7 1 1 0 1364.3784 4011.1665 S150s TMT10 132 (R) TSSLPAIPNPFPELCGPGsPPVLTPGSLPPSQAAAK (Q) T(0.0)S(0.0)S(0.0)LPAIPNPFPELCGPGS(0.99)PPVLT(0.0)PGS(0.0)LPPS(0.0)QAAAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GRB10 68200.1 9 4 2006.1 102.87 HUMAN 1 -23.4883 -19.5506 PELDPRGSDEENLDS-p Q13459;S1992-p PELDPRGSDEENLDS 0.275481256258864 0.561609720559544 -0.216666666666667 0.0553333333333334 10.59598642133 3.3762921574865 -0.216666666666667 0.0553333333333334 0.0871768872273911 0.459590226188475 -2.08547116207811 0.795737954683542 Q13459 MYO9B Q13459.S1992.p_MYO9B Q13459_S1992s _1_1_1992_1992 Q13459 Q13459|Q13459-2 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25539.25539.5 22.81 17.55 3.028 9 1 1 0 861.8005 4225.0105 S1992s TMT10 1978 (K) EDITYRLPELDPRGsDEENLDSETSASTESLLEER (A) EDIT(0.0)Y(0.0)RLPELDPRGS(0.99)DEENLDS(0.0)ET(0.0)S(0.0)AS(0.0)T(0.0)ES(0.0)LLEER s:Phosphorylated S MYO9B 244993.9 4 20 211.1 438.12 HUMAN 1 -10.596 3.3763 PELDSGASVEEALER-p X6RAB3;S587-p PELDSGASVEEALER 0.261246995844601 0.362634117704378 -0.169333333333333 0.124333333333333 11.0466038550819 5.84213100505217 -0.169333333333333 0.124333333333333 0.0785849922170698 0.260487507093018 -2.16427595884205 1.25609753063462 X6RAB3 NotFound X6RAB3.S587.p_NotFound X6RAB3_S584sS587s_2_2_584_587 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24128.24171.3 19.5 17.99 10.23 6 2 2 0 1056.4631 3007.433 S584s S587s TMT10 568 (R) GSTASQYDNVPGPELDsGAsVEEALER (A) GS(0.0)T(0.0)AS(0.0)QY(0.0)DNVPGPELDS(0.99)GAS(0.99)VEEALER s:Phosphorylated S USP6NL 96835.5 2 22 364.1 342.41 HUMAN 1 -11.0466 5.8421 PELELEASWPTHPHR-p O43149;S1267-p PELELEASWPTHPHR 0.081423258943083 0.883929070618543 0.494 0.0163333333333334 23.2640219914355 0.753641129977583 0.494 0.0163333333333334 0.0047162606711373 0.840690010614387 4.61712088101875 0.210866410620156 O43149 ZZEF1 O43149.S1267.p_ZZEF1 O43149_S1267s _1_1_1267_1267 O43149 O43149 Zinc finger ZZ-type and EF-hand domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15363.15363.4 11.77 11.77 2.606 2 1 1 0 658.8132 2552.2666 S1267s TMT10 1256 (R) HQVCPELELEAsWPTHPHR (N) HQVCPELELEAS(0.99)WPT(0.0)HPHR C:Carbamidomethylation,s:Phosphorylated S ZZEF1 335976 1 2 1481.1 138.54 HUMAN 1 23.264 0.7536 PELESKESVL_____-p P43007;S530-p PELESKESVL_____ 0.767866039421668 0.882831065887571 -0.0733333333333333 -0.0203333333333333 2.19732554781945 0.760099001995396 -0.0733333333333333 -0.0203333333333333 0.602930765807543 0.839440850364111 -0.552070935595012 -0.21254936898987 P43007 SLC1A4 P43007.S530.p_SLC1A4 P43007_S527sS530s_2_2_527_530 P43007 P43007|P43007-2 Neutral amino acid transporter A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24401.24401.4 17.92 17.92 2.237 7 2 2 0 963.4681 3690.9114 S527s S530s TMT10 502 (K) SEEETSPLVTHQNPAGPVASAPELEsKEsVL (-) S(0.0)EEET(0.0)S(0.0)PLVT(0.0)HQNPAGPVAS(0.0)APELES(0.99)KES(0.99)VL K:TMT10,s:Phosphorylated S SLC1A4 56121.4 2 5 2549.1 78.96 HUMAN 1 -2.1973 -0.7601 PELHKGDSDSEEDEP-p Q92733;S157-p PELHKGDSDSEEDEP 0.640740678597868 0.0135334473074496 -0.0626666666666667 0.429333333333333 3.60988479663291 25.9737119152844 -0.0637379884128138 0.429333333333333 0.435523426468716 0.00252713712882459 -0.841783335272115 5.28775382086642 Q92733 PRCC Q92733.S157.p_PRCC Q92733_S157s _1_1_157_157 Q92733 Q92733 Proline-rich protein PRCC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13905.13905.5 18.1 18.45 1.234 3 1 1 0 587.897 2855.4878 S157s TMT10 147 (K) IAAPELHKGDsDSEEDEPTK (K) IAAPELHKGDS(0.99)DS(0.0)EEDEPT(0.0)K K:TMT10,s:Phosphorylated S PRCC 52416.8 5 4 1101.1 177.58 HUMAN 1 -3.6099 25.9737 PELIQVKSELPLDPL-p Q15758;S503-p PELIQVKSELPLDPL 0.411729788859669 0.0075799697481076 -0.113333333333333 -0.455 7.11028735873772 30.2923027592736 -0.113333333333333 -0.455 0.19452313676401 0.000934909825542514 -1.48030496022446 -6.5110995257929 Q15758 SLC1A5 Q15758.S503.p_SLC1A5 Q15758_S503s _1_1_503_503 Q15758 Q15758|M0QXM4|Q15758-2|Q15758-3 Neutral amino acid transporter B(0) HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36044.36044.5 23.2 22.81 7.407 4 1 1 0 810.8453 3970.2607 S503s TMT10 493 (R) STEPELIQVKsELPLDPLPVPTEEGNPLLK (H) S(0.0)T(0.0)EPELIQVKS(0.99)ELPLDPLPVPT(0.0)EEGNPLLK K:TMT10,s:Phosphorylated S SLC1A5 57053.7 6 3 1953.1 105.31 HUMAN 1 -7.1103 -30.2923 PELKKSVSMLSLNTP-p Q9H8V3;S367-p PELKKSVSMLSLNTP 0.601861285397072 0.00364416436006486 0.0756666666666666 -0.72 4.07357303049568 36.213060476795 0.0756666666666667 -0.72 0.391419715508658 0.000239162977894306 0.931167273938915 -8.55168884060278 Q9H8V3 ECT2 Q9H8V3.S367.p_ECT2 Q9H8V3_S367s _1_1_367_367 Q9H8V3 Q9H8V3-3|Q9H8V3-4|Q9H8V3-2 Protein ECT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19829.19829.3 18.18 18.18 2.204 5 1 1 0 610.3001 1748.9162 S367s TMT10 365 (K) SVsMLSLNTPNSNR (K) S(0.0)VS(0.99)MLS(0.0)LNT(0.0)PNS(0.0)NR s:Phosphorylated S ECT2 104530 6 5 572.1 269.2 HUMAN 1 4.0736 -36.2131 PELKQQLTGHSKRVA-p Q9Y490;T2270-p PELKQQLTGHSKRVA 0.132882806400642 0.120290643439018 0.278666666666667 -0.164333333333333 18.0755691345423 12.1279340060703 0.278666666666667 -0.164333333333333 0.0155755390702115 0.0612641763871446 3.47757517807693 -2.35385800838441 Q9Y490 TLN1 Q9Y490.T2270.p_TLN1 Q9Y490_T2270t _1_1_2270_2270 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4689.4689.3 12.5 12.5 5.357 2 1 1 0 479.5937 1356.8 T2270t TMT10 2267 (K) QQLtGHSK (R) QQLT(0.99)GHS(0.0)K K:TMT10,t:Phosphorylated T TLN1 271930.4 3 27 267.1 395.2 HUMAN 1 18.0756 -12.1279 PELKRIKTEDGEGIV-p Q01167;T634-p PELKRIKTEDGEGIV 0.47558115383855 0.472389754387631 0.168 0.142 5.94308639739697 4.34152583449159 0.168 0.142 0.254502094159159 0.367999659260979 1.27441825340527 0.981698252960209 Q01167 FOXK2 Q01167.T634.p_FOXK2 Q01167_T634t _1_1_634_634 Q01167 Q01167 Forkhead box protein K2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28738.28738.3 20.59 20.59 15.125 3 1 1 0 963.8615 2809.6075 T634t TMT10 632 (R) IKtEDGEGIVIALSVDTPPAAVR (E) IKT(0.99)EDGEGIVIALS(0.0)VDT(0.0)PPAAVR K:TMT10,t:Phosphorylated T FOXK2 69288.9 3 11 689.1 243.19 HUMAN 1 5.9431 4.3415 PELNVSSSETEEDKE-p Q86UV5-8;S900-p PELNVSSSETEEDKE 0.918221647629323 0.950561945305192 0.028 0.00800000000000003 0.723510315443035 0.315026444826328 0.028 0.00800000000000005 0.846542893844677 0.93003085164281 0.20300955586223 0.0919614391025567 Q86UV5 USP48 Q86UV5.8.S900.p_USP48 Q86UV5-8_S898sS899sS900s_3_3_898_900 Q86UV5-8 Q86UV5-8|Q86UV5-6 Isoform 8 of Ubiquitin carboxyl-terminal hydrolase 48 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15515.15515.5 13.8 13.8 2.307 7 3 3 0 1125.3287 5382.707 S898s S899s S900s TMT10 890 (K) DSAPELNVsssETEEDKEEAKPDGEKDPDFNQSNGGTKR (Q) DS(0.0)APELNVS(0.99)S(0.99)S(0.99)ET(0.0)EEDKEEAKPDGEKDPDFNQS(0.0)NGGT(0.0)KR K:TMT10,s:Phosphorylated S USP48 122634.9 3 5 3513.1 49.33 HUMAN 1 0.7235 0.315 PELPALDSDGDSDDG-p S5FZ81;S297-p PELPALDSDGDSDDG 0.96694291390501 0.11220872848027 0.0106666666666667 0.230333333333333 0.283314896229243 12.5334115104583 0.0106666666666667 0.230333333333333 0.936846654767155 0.055803167228733 0.0829852613254615 2.42604584268532 S5FZ81 NotFound S5FZ81.S297.p_NotFound S5FZ81_S297sS301s_2_2_297_301 S5FZ81 Q8WUB8|Q8WUB8-2|Q8WUB8-3|S5FZ81 PHD finger protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35328.35733.4 14.78 14.78 2.432 5 2 2 0 1152.5286 4447.1353 S297s S301s TMT10 276 (R) YLPLNTALYEPPLDPELPALDsDGDsDDGEDGRGDEK (R) Y(0.0)LPLNT(0.0)ALY(0.0)EPPLDPELPALDS(0.99)DGDS(0.99)DDGEDGRGDEK K:TMT10,s:Phosphorylated S PHF10 42782.4 3 11 1372.1 149.1 HUMAN 1 0.2833 12.5334 PELPPGLSPEATAPV-p Q9BRP8;S64-p PELPPGLSPEATAPV 0.670171441411796 0.0423207760909684 -0.0693333333333333 -0.332333333333333 3.25485543063357 18.3983891697483 -0.0693333333333333 -0.332333333333333 0.472622569451029 0.0144597599445192 -0.771717567952813 -3.54036546982937 Q9BRP8 WIBG Q9BRP8.S64.p_WIBG Q9BRP8_S64s _1_1_64_64 Q9BRP8 Q9BRP8|Q9BRP8-2 Partner of Y14 and mago HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20424.20424.4 21.51 21.51 4.255 6 1 1 0 963.266 3770.0943 S64s TMT10 55 (K) SKPELPPGLsPEATAPVTPSRPEGGEPGLSK (T) S(0.0)KPELPPGLS(0.99)PEAT(0.0)APVT(0.0)PS(0.0)RPEGGEPGLS(0.0)K K:TMT10,s:Phosphorylated S PYM1 22655.1 1 2 2950.1 64.93 HUMAN 1 -3.2549 -18.3984 PELQKGPSPINAFSN-p Q8NDV7;S1503-p PELQKGPSPINAFSN 0.980593512823283 0.147033521558138 -0.00433333333333335 0.167666666666667 0.169646687290091 10.9634651553452 -0.00433333333333333 0.167666666666667 0.961690511857579 0.0801038674400758 -0.0502965032088017 2.1487449362195 Q8NDV7 TNRC6A Q8NDV7.S1503.p_TNRC6A Q8NDV7_S1503s_1_1_1503_1503 Q8NDV7 Q8NDV7|Q8NDV7-5|Q8NDV7-6|Q8NDV7-2|Q8NDV7-3 Trinucleotide repeat-containing gene 6A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33261.33261.4 20.18 20.18 1.386 5 1 1 0 1061.2804 4161.1262 S1503s N1516n TMT10 1501 (K) GPsPINAFSNFPIGLnSNLNVNMDMNSIKEPQSR (L) GPS(0.99)PIN(0.0)AFS(0.0)N(0.0)FPIGLN(0.99)S(0.0)N(0.0)LN(0.0)VN(0.0)MDMN(0.0)S(0.0)IKEPQS(0.0)R K:TMT10,s:Phosphorylated S,n:Deamidated TNRC6A 211092.3 3 14 181.1 478.43 HUMAN 1 -0.1696 10.9635 PEMEDANSEKSINEE-p Q13523;S20-p PEMEDANSEKSINEE 0.746527005315183 0.0185733363835007 0.0461666666666667 0.358 2.41009198254272 23.8226037764977 0.0461666666666667 0.358 0.574104302685395 0.00414705334947094 0.59781945516214 4.74606377163694 Q13523 PRPF4B Q13523.S20.p_PRPF4B Q13523_S20sS23s_2_2_20_23 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13592.13592.4 22.17 18.69 2.971 6 2 2 0 1225.287 4722.1961 M15m S20s S23s Acetyl 2 (M) AAAETQSLREQPEmEDANsEKsINEENGEVSEDQSQNK (H) AAAET(0.0)QS(0.0)LREQPEM(1.0)EDANS(0.99)EKS(0.99)INEENGEVS(0.0)EDQS(0.0)QNK K:TMT10,m:Oxidized methionine,s:Phosphorylated S PRPF4B 117327.1 45 30 70.1 666.55 HUMAN 2 2.4101 23.8226 PEMIRPQSAISSFRV-p Q5VT06;S930-p PEMIRPQSAISSFRV 0.171306633335012 0.749805046459063 0.241333333333333 0.051 15.2699122537756 1.72824002421849 0.241333333333333 0.051 0.0297172607282064 0.671701004206492 2.92922841073913 0.447691314209401 Q5VT06 CEP350 Q5VT06.S930.p_CEP350 Q5VT06_S930s _1_1_930_930 Q5VT06 Q5VT06 Centrosome-associated protein 350 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21983.21983.4 13.83 13.83 3.215 3 1 1 0 600.3334 2318.3419 S930s TMT10 921 (K) KLPEMIRPQsAISSFR (V) KLPEMIRPQS(0.99)AIS(0.0)S(0.0)FR K:TMT10,s:Phosphorylated S CEP350 352521.4 1 5 265.1 395.34 HUMAN 1 15.2699 1.7282 PEMKRQRSIQEDTKK-p Q8NDI1;S1035-p PEMKRQRSIQEDTKK 0.575392665232381 0.119464099601837 -0.0936666666666667 -0.229 4.41417442351528 12.1667592613941 -0.0936666666666667 -0.229 0.361894978985829 0.0607189249838624 -0.9955167304213 -2.36075116937628 Q8NDI1 EHBP1 Q8NDI1.S1035.p_EHBP1 Q8NDI1_S1035s _1_1_1035_1035 Q8NDI1 Q8NDI1|Q8NDI1-2|Q8NDI1-3 EH domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5794.5794.3 15.41 15.41 15.412 2 1 1 0 758.4053 2193.233 S1035s Hydrogen 1035 (R) sIQEDTKKGNEEK (A) S(0.99)IQEDT(0.0)KKGNEEK K:TMT10-Lys-Only,s:Phosphorylated S EHBP1 140642.4 13 14 285.1 385.52 HUMAN 1 -4.4142 -12.1668 PEMKSFFTPGKPKTT-p Q9NTI5;T1121-p PEMKSFFTPGKPKTT 0.419598745385739 0.00105578872948118 0.111333333333333 -1.24966666666667 6.96603962000157 50.7606941105066 0.111333333333333 -1.24966666666667 0.201092576245245 8.39325830673516e-06 1.45506730901359 -16.2170454475953 Q9NTI5 PDS5B Q9NTI5.T1121.p_PDS5B Q9NTI5_T1121t _1_1_1121_1121 Q9NTI5 Q9NTI5|Q9NTI5-2 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17778.17832.3 14.34 14.34 3.978 2 1 1 0 592.6733 1696.0401 T1121t TMT10 1118 (K) SFFtPGKPK (T) S(0.0)FFT(0.99)PGKPK K:TMT10,t:Phosphorylated T PDS5B 165919.5 4 1 100.1 597.99 HUMAN 1 6.966 -50.7607 PEMLTSGSD______-p Q9HBE1-2;S536-p PEMLTSGSD______ 0.872380284914567 0.468779564879112 0.0353333333333333 0.0713333333333334 1.16048680094924 4.38529671363305 0.0353333333333333 0.0713333333333334 0.765510795950332 0.364309359297205 0.313664136153589 0.989919663143508 Q9HBE1 PATZ1 Q9HBE1.2.S536.p_PATZ1 Q9HBE1-2_S536s _1_1_536_536 Q9HBE1-2 Q9HBE1-2 Isoform 2 of POZ-, AT hook-, and zinc finger-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10051.10051.2 15.56 15.56 2.985 3 1 1 0 701.3171 1321.6619 S536s TMT10 528 (R) RPEMLTSGsD (-) RPEMLT(0.0)S(0.0)GS(0.99)D s:Phosphorylated S PATZ1 59135.1 1 5 1807.2 113.57 HUMAN 1 1.1605 4.3853 PENAERQTPTVVESA-p Q9HCM1;T469-p PENAERQTPTVVESA 0.941198411303269 0.0609067990843137 0.0156666666666666 0.265666666666667 0.517913311026858 16.1907837606154 0.0156666666666666 0.265666666666667 0.88758237330917 0.0240392892969175 0.148158279514879 3.10268416202274 Q9HCM1 KIAA1551 Q9HCM1.T469.p_KIAA1551 Q9HCM1_T469t_1_1_469_469 Q9HCM1 Q9HCM1 Uncharacterized protein KIAA1551 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20367.20367.4 8.3 8.3 1.351 6 1 1 0 948.4843 3709.9471 N464n T469t TMT10 451 (K) IQSGPQITPVMPEnAERQtPTVVESAETNK (T) IQS(0.0)GPQIT(0.0)PVMPEN(0.99)AERQT(0.99)PT(0.0)VVES(0.0)AET(0.0)N(0.0)K K:TMT10,n:Deamidated,t:Phosphorylated T KIAA1551 196679.6 1 3 1693.1 120.71 HUMAN 1 0.5179 16.1908 PENEKEASGGDSPKD-p Q01167;S248-p PENEKEASGGDSPKD 0.102728705875057 0.00477349932614541 -0.934666666666667 0.878 20.8891324522629 33.9266512063235 -0.934666666666667 0.878 0.00814867045807354 0.000404887975716372 -4.07241964256699 7.70731321325205 Q01167 FOXK2 Q01167.S248.p_FOXK2 Q01167_S248sS252s_2_2_248_252 Q01167 Q01167|Q01167-2|Q01167-3 Forkhead box protein K2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36722.36722.5 24.44 19.06 1.606 7 2 2 0 892.0505 4296.288 S248s S252s TMT10 246 (K) EAsGGDsPKDDSKPPYSYAQLIVQAITMAPDK (Q) EAS(0.99)GGDS(0.99)PKDDS(0.0)KPPY(0.0)S(0.0)Y(0.0)AQLIVQAIT(0.0)MAPDK K:TMT10,s:Phosphorylated S FOXK2 69288.9 4 14 689.1 243.19 HUMAN 1 -20.8891 33.9267 PENILCESPEKVSPV-p Q9BUB5;S221-p PENILCESPEKVSPV 0.127834764524992 0.29442443153944 -0.47 -0.172333333333333 18.5056741979528 7.01122346049481 -0.47 -0.172333333333333 0.014106932237029 0.199011262102609 -3.56533678035999 -1.46257295267831 Q9BUB5 MKNK1 Q9BUB5.S221.p_MKNK1 Q9BUB5_S221s _1_1_221_221 Q9BUB5 Q9BUB5|Q9BUB5-2|Q9BUB5-3|Q7Z319 MAP kinase-interacting serine/threonine-protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19866.19866.4 15.57 12.1 99 1 1 1 0 610.5757 2359.3146 S221s TMT10 211 (R) DLKPENILCEsPEK (V) DLKPENILCES(1.0)PEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MKNK1 52083.2 5 2 1937.1 106.18 HUMAN 1 -18.5057 -7.0112 PENIPFRSPSWYGIP-p P78347;S515-p PENIPFRSPSWYGIP 0.263982170350774 0.0778804766526571 0.278333333333333 -0.505 10.9714360081578 14.7060659787648 0.278333333333333 -0.505 0.0799569831051633 0.0338371208229115 2.15110591399425 -2.82170605171179 P78347 GTF2I P78347.S515.p_GTF2I P78347_S515s _1_1_515_515 P78347 P78347|P78347-3|P78347-4|P78347-2 General transcription factor II-I HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28951.28951.5 29.29 25.59 1.195 5 1 1 0 925.8735 4545.376 S515s TMT10 489 (K) AVPYQKFEAHPNDLYVEGLPENIPFRsPSWYGIPR (L) AVPY(0.0)QKFEAHPNDLY(0.0)VEGLPENIPFRS(0.99)PS(0.0)WY(0.0)GIPR K:TMT10,s:Phosphorylated S GTF2I 112927.8 5 6 140.1 523.54 HUMAN 1 10.9714 -14.7061 PENLDLQSPTKLSAS-p P41182;S427-p PENLDLQSPTKLSAS 0.924661341938637 0.0200678473676497 0.0143333333333333 -0.348666666666667 0.670089988900786 23.2612746709654 0.0143333333333333 -0.348666666666667 0.857020086981575 0.00471924509280815 0.188945523965774 -4.61122502539325 P41182 BCL6 P41182.S427.p_BCL6 P41182_S427s _1_1_427_427 P41182 P41182|P41182-2 B-cell lymphoma 6 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22911.22911.4 21.07 16.79 1.259 9 1 1 0 1174.0718 4613.2904 S427s TMT10 407 (R) AYTAPPACQPPMEPENLDLQsPTKLSASGEDSTIPQASR (L) AY(0.0)T(0.0)APPACQPPMEPENLDLQS(0.99)PT(0.0)KLS(0.0)AS(0.0)GEDS(0.0)T(0.0)IPQAS(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BCL6 80670.9 8 11 557.1 273.04 HUMAN 1 0.6701 -23.2613 PEPAGTPSPSGEADG-p Q8WVT3;S109-p PEPAGTPSPSGEADG 0.195954837597201 0.0408431144222722 0.272666666666667 0.319666666666667 13.7959782422296 18.6161464517801 0.272666666666667 0.319666666666667 0.041725560164031 0.0137526172038206 2.65553560980731 3.58499027960792 Q8WVT3 TRAPPC12 Q8WVT3.S109.p_TRAPPC12 Q8WVT3_S109sS111s_2_2_109_111 Q8WVT3 Q8WVT3 Trafficking protein particle complex subunit 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11799.11799.4 32.08 27.76 1.177 5 2 2 0 1166.2375 4501.976 S109s S111s TMT10 88 (R) VRDEAEPGGEGDPGPEPAGTPsPsGEADGDCAPEDAAPSSGGAPR (Q) VRDEAEPGGEGDPGPEPAGT(0.0)PS(0.99)PS(0.99)GEADGDCAPEDAAPS(0.0)S(0.0)GGAPR C:Carbamidomethylation,s:Phosphorylated S TRAPPC12 79830.1 5 4 2064.1 99.88 HUMAN 1 13.796 18.6161 PEPDGEDSLEQSPLL-p Q14814;S106-p PEPDGEDSLEQSPLL 0.435523333607782 0.00660858800328804 0.16 0.549333333333333 6.64701420740516 31.3280688469517 0.16 0.549333333333333 0.216420591292616 0.000736534535392909 1.39907213563234 6.83512082607472 Q14814 MEF2D Q14814.S106.p_MEF2D Q14814_S98sS106s_2_2_98_106 Q14814 Q14814|Q14814-4|Q05BX2 Myocyte-specific enhancer factor 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26580.26580.3 8.01 8.01 1.319 3 2 2 0 1118.4767 3193.4883 S98s S106s TMT10 92 (K) GFNGCDsPEPDGEDsLEQSPLLEDK (Y) GFNGCDS(0.99)PEPDGEDS(0.99)LEQS(0.0)PLLEDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MEF2D 56165 5 10 1187.1 168.72 HUMAN 1 6.647 31.3281 PEPDIQDSSGSEAQS-p Q9BZF1;S807-p PEPDIQDSSGSEAQS 0.221440669353428 0.862901166327382 0.192833333333333 0.0183333333333333 12.6053888990331 0.902820408290877 0.192833333333333 0.0183333333333333 0.0548859404522264 0.812302816693386 2.44019727454614 0.249296864327289 Q9BZF1 OSBPL8 Q9BZF1.S807.p_OSBPL8 Q9BZF1_S807sS808s_2_2_807_808 Q9BZF1 Q9BZF1|Q9BZF1-2|Q9BZF1-3 Oxysterol-binding protein-related protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13807.13807.4 16.74 16.74 2.357 9 2 2 0 807.6198 3067.522 S807s S808s TMT10 796 (K) GYSSPEPDIQDssGSEAQSVKPSTR (R) GY(0.0)S(0.0)S(0.0)PEPDIQDS(0.99)S(0.99)GS(0.0)EAQS(0.0)VKPS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S OSBPL8 101821.3 3 11 1293.1 156.92 HUMAN 2 12.6054 0.9028 PEPEAEESDLDSGSV-p Q12873-3;S383-p PEPEAEESDLDSGSV 0.111927598528294 0.805891684538003 0.526 0.0293333333333333 19.8668929002307 1.31246518323181 0.526 0.0293333333333333 0.0103112355969601 0.739185572476842 3.85044220798767 0.350483199278627 Q12873 CHD3 Q12873.3.S383.p_CHD3 Q12873-3_S383s _1_1_383_383 Q12873-3 Q12873-3|Q12873-2 Isoform 3 of Chromodomain-helicase-DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13784.13784.5 25.05 25.05 4.78 8 1 1 0 914.8287 4490.1384 S383s TMT10 364 (K) KGGSYVFQSDEGPEPEAEEsDLDSGSVHSASGRPDGPVR (T) KGGS(0.0)Y(0.0)VFQS(0.0)DEGPEPEAEES(0.99)DLDS(0.0)GS(0.0)VHS(0.0)AS(0.0)GRPDGPVR K:TMT10,s:Phosphorylated S CHD3 234573.2 1 44 49.3 753.68 HUMAN 1 19.8669 1.3125 PEPEKPVSPPPIESK-p Q9Y618;S215-p PEPEKPVSPPPIESK 0.836155682095094 0.547185190146381 -0.033 0.0576666666666667 1.50258593225573 3.52181017770086 -0.033 0.0576666666666667 0.707524375640968 0.444445979853078 -0.395593552660566 0.824415679485697 Q9Y618 NCOR2 Q9Y618.S215.p_NCOR2 Q9Y618_S215s _1_1_215_215 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17124.17327.5 26.33 26.33 10.324 2 1 1 0 776.6257 3799.1299 S215s TMT10 197 (K) QQQLEEEAAKPPEPEKPVsPPPIESK (H) QQQLEEEAAKPPEPEKPVS(0.99)PPPIES(0.0)K K:TMT10,s:Phosphorylated S NCOR2 275540.8 8 6 16.1 1053.89 HUMAN 1 -1.5026 3.5218 PEPEKPVSPPPVEQK-p O75376-2;S224-p PEPEKPVSPPPVEQK 0.833574071653314 0.0144671845653115 0.032 0.362333333333333 1.52435263687843 25.4973478899917 0.032 0.362333333333333 0.703987157052083 0.00282010456131836 0.40068537373906 5.16423924466727 O75376 NCOR1 O75376.2.S224.p_NCOR1 O75376-2_S224s _1_1_224_224 O75376-2 O75376|A0A088AWL3|O75376-2|O75376-3 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15974.16179.5 24.15 24.15 99 1 1 1 0 782.0292 3826.1408 S224s TMT10 206 (K) QQQLEEEAAKPPEPEKPVsPPPVEQK (H) QQQLEEEAAKPPEPEKPVS(1.0)PPPVEQK K:TMT10,s:Phosphorylated S NCOR1 259453.1 10 2 35.1 889.74 HUMAN 1 1.5244 25.4973 PEPEVLSTQEDLFDQ-p Q12888-2;T307-p PEPEVLSTQEDLFDQ 0.207244478183162 0.0173615564197841 -0.237666666666667 0.345333333333333 13.2111086583053 24.2722775140433 -0.237666666666667 0.345333333333333 0.0477407386493835 0.00373914449757656 -2.54917808104493 4.85596477726585 Q12888 TP53BP1 Q12888.2.T307.p_TP53BP1 Q12888-2_S306sT307t_2_2_306_307 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25301.25301.3 8.8 8.8 8.8 4 2 2 0 927.7603 2621.3347 S306s T307t TMT10 299 (K) SPEPEVLstQEDLFDQSNK (T) S(0.0)PEPEVLS(0.99)T(0.99)QEDLFDQS(0.0)NK K:TMT10,s:Phosphorylated S,t:Phosphorylated T TP53BP1 216167.2 1 84 3.1 2297.07 HUMAN 1 -13.2111 24.2723 PEPGAAPSNEEDDSD-p Q9H6Z4-3;S465-p PEPGAAPSNEEDDSD 0.502031518920472 0.0289819743755993 0.107666666666667 0.362333333333333 5.51907486545619 20.8209373039123 0.107666666666667 0.362333333333333 0.280603131536489 0.00827763494692822 1.19838833869595 4.05339628816473 Q9H6Z4 RANBP3 Q9H6Z4.3.S465.p_RANBP3 Q9H6Z4-3_S465sS471s_2_2_465_471 Q9H6Z4-3 B7Z7F3|Q9H6Z4|Q9H6Z4-2|Q9H6Z4-3 Isoform 3 of Ran-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19506.19506.4 15.83 15.83 3.679 8 2 2 0 1395.0713 5416.3364 S465s N466n S471s Hydrogen 447 (R) VEQEQEAKMPAPEPGAAPsnEEDDsDDDDVLAPSGATAAGAGDEGDGQTTGST (-) VEQEQEAKMPAPEPGAAPS(0.99)N(1.0)EEDDS(0.99)DDDDVLAPS(0.0)GAT(0.0)AAGAGDEGDGQT(0.0)T(0.0)GS(0.0)T(0.0) K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated RANBP3 53752.1 4 18 444.1 311.24 HUMAN 1 5.5191 20.8209 PEPGLDLSLSPRPDS-p Q8TAP8;S45-p PEPGLDLSLSPRPDS 0.51928988085149 0.178788388097215 0.113666666666667 0.208333333333333 5.25563914920633 9.83355448450456 0.113666666666667 0.208333333333333 0.298150872835755 0.10390693910598 1.15070572731932 1.95203255136162 Q8TAP8 PPP1R35 Q8TAP8.S45.p_PPP1R35 Q8TAP8_S45sS47sS52s_3_3_45_52 Q8TAP8 Q8TAP8 Protein phosphatase 1 regulatory subunit 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26823.26823.4 8.07 8.07 99 3 3 3 0 699.3271 2554.3827 S45s S47s S52s TMT10 35 (R) APVPEPGLDLsLsPRPDsPQPR (H) APVPEPGLDLS(1.0)LS(1.0)PRPDS(1.0)PQPR s:Phosphorylated S PPP1R35 28123.8 1 6 2252.1 91.23 HUMAN 1 5.2556 9.8336 PEPLSWRSDEEDEDS-p Q9HCL2;S688-p PEPLSWRSDEEDEDS 0.902213389383327 0.139219549693382 -0.0213333333333333 0.168 0.877818413620532 11.2816614360099 -0.0213333333333333 0.168 0.816992667266976 0.0744447123896236 -0.242943265097667 2.20450612673552 Q9HCL2 GPAM Q9HCL2.S688.p_GPAM Q9HCL2_S688sS695s_2_2_688_695 Q9HCL2 Q9HCL2|Q5VW52 Glycerol-3-phosphate acyltransferase 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21283.21283.4 11.62 11.62 1.213 3 2 2 0 878.6392 3351.6017 S688s S695s TMT10 679 (K) KLPEPLSWRsDEEDEDsDFGEEQR (D) KLPEPLS(0.0)WRS(0.99)DEEDEDS(0.99)DFGEEQR K:TMT10,s:Phosphorylated S GPAM 94820.1 4 7 2157.1 95.28 HUMAN 1 -0.8778 11.2817 PEPPEDGTLLSEAKL-p Q9UPN4-2;T519-p PEPPEDGTLLSEAKL 0.550364482600263 0.0168823213678833 0.120333333333333 -0.481 4.78502035388446 24.4607411494884 0.120333333333333 -0.481 0.332275227948037 0.00358035331019739 1.06451057172299 -4.90253526576245 Q9UPN4 CEP131 Q9UPN4.2.T519.p_CEP131 Q9UPN4-2_T519t _1_1_519_519 Q9UPN4-2 Q9UPN4|Q9UPN4-2|I3L2J8|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28277.28277.3 7.74 7.74 2.873 3 1 1 0 813.7524 2359.2797 T519t TMT10 508 (K) LSAFPEPPEDGtLLSEAK (L) LS(0.0)AFPEPPEDGT(0.99)LLS(0.0)EAK K:TMT10,t:Phosphorylated T CEP131 122301.7 3 17 359.1 345.98 HUMAN 1 4.785 -24.4607 PEPPGSGSPAPPRRR-p Q9UKJ3;S740-p PEPPGSGSPAPPRRR 0.435464296814446 0.034854130188825 0.107666666666667 0.317666666666667 6.64796663452172 19.6255246343221 0.107666666666667 0.317666666666667 0.216373134498223 0.0109005280439893 1.39923970752074 3.7955737376424 Q9UKJ3 GPATCH8 Q9UKJ3.S740.p_GPATCH8 Q9UKJ3_S740s _1_1_740_740 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7254.7254.5 19.31 13.67 2.675 5 1 1 0 594.1018 2886.511 S740s TMT10 721 (K) SSAPADSERGPKPEPPGSGsPAPPR (R) S(0.0)S(0.0)APADS(0.0)ERGPKPEPPGS(0.0)GS(0.99)PAPPR K:TMT10,s:Phosphorylated S GPATCH8 165107.3 24 6 231.1 422.52 HUMAN 1 6.648 19.6255 PEPPSPDSPTETFAA-p Q9BUA3;S251-p PEPPSPDSPTETFAA 0.934910099953112 0.414201462863505 0.0113333333333333 -0.0843333333333333 0.575095359585257 5.09215287245884 0.012378525280794 -0.0843333333333333 0.875972483382332 0.309588423569493 0.163613867034962 -1.12068903190304 Q9BUA3 C11orf84 Q9BUA3.S251.p_C11orf84 Q9BUA3_S248sS251s_2_2_248_251 Q9BUA3 Q9BUA3 SPIN1-docking protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24739.24739.4 18.96 18.96 1.59 4 2 2 0 760.3378 2878.3944 S248s S251s TMT10 239 (K) NLDPDPEPPsPDsPTETFAAPAEVR (H) NLDPDPEPPS(0.99)PDS(0.99)PT(0.0)ET(0.0)FAAPAEVR s:Phosphorylated S C11orf84 41321.3 7 12 884.1 206.69 HUMAN 1 0.5751 -5.0922 PEPQLPKSPNLVRAK-p A0A0C4DGQ1;S245-p PEPQLPKSPNLVRAK 0.43497101841619 0.503521500436094 0.115333333333333 -0.118 6.659076265519 3.99141981570348 0.115333333333333 -0.118 0.215820340529072 0.39889447260816 1.40119416858199 -0.915334355099476 A0A0C4DGQ1 NotFound A0A0C4DGQ1.S245.p_NotFound A0A0C4DGQ1_S245s _1_1_245_245 A0A0C4DGQ1 A0A0C4DGQ1 Zinc finger and SCAN domain-containing protein 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16181.16181.4 12.12 12.12 4.711 3 1 1 0 810.6765 3159.7162 S245s TMT10 227 (K) ENREENPGLTSPEPQLPKsPNLVR (A) ENREENPGLT(0.0)S(0.0)PEPQLPKS(0.99)PNLVR K:TMT10,s:Phosphorylated S ZSCAN5A 56789.3 1 8 240.59 415.72 HUMAN 1 6.6591 -3.9914 PEPQLPKSPTDLVRA-p Q9BUG6;S245-p PEPQLPKSPTDLVRA 0.547952287657366 0.248192961754145 -0.0803333333333333 0.150333333333333 4.82168674511823 7.97298939783792 -0.0803333333333334 0.145930462254655 0.329481720769629 0.159478102687752 -1.07127764235653 1.62995983100134 Q9BUG6 ZSCAN5A Q9BUG6.S245.p_ZSCAN5A Q9BUG6_S245s _1_1_245_245 Q9BUG6 Q9BUG6|Q9BUG6-2|K7EMC4 Zinc finger and SCAN domain-containing protein 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18526.18526.4 10.87 10.87 1.382 4 1 1 0 836.1832 3261.7479 S245s TMT10 227 (K) ENREENPGLTSPEPQLPKsPTDLVR (A) ENREENPGLT(0.0)S(0.0)PEPQLPKS(0.99)PT(0.0)DLVR K:TMT10,s:Phosphorylated S ZSCAN5A 56891.4 1 131 240.64 415.72 HUMAN 1 -4.8217 7.973 PEPVEANSEESDSVF-p Q5JRA6;S186-p PEPVEANSEESDSVF 0.80199546725685 0.0247429756117273 0.0363333333333333 0.442666666666667 1.84406248260302 21.8563768782754 0.0363333333333333 0.442666666666667 0.654024099837706 0.00652172244874325 0.473984771063608 4.28467060610457 Q5JRA6 MIA3 Q5JRA6.S186.p_MIA3 Q5JRA6_S186s _1_1_186_186 Q5JRA6 Q5JRA6|Q5JRA6-2 Transport and Golgi organization protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23215.23215.5 19.81 19.81 1.208 7 1 1 0 919.4241 4513.1055 S186s TMT10 174 (K) EREPEPEPVEANsEESDSVFSENTEDLQEQFTTQK (H) EREPEPEPVEANS(0.99)EES(0.0)DS(0.0)VFS(0.0)ENT(0.0)EDLQEQFT(0.0)T(0.0)QK K:TMT10,s:Phosphorylated S MIA3 214383.2 2 1 378.1 336.1 HUMAN 1 1.8441 21.8564 PEQERRNSLLHGYRS-p Q9HA65;S366-p PEQERRNSLLHGYRS 0.919774718344234 0.673105507813863 0.0216666666666667 0.0456666666666667 0.709010248621888 2.3515333204006 0.0216666666666667 0.0456666666666667 0.849374024196986 0.581897736643946 0.199204672607865 0.585244644656207 Q9HA65 TBC1D17 Q9HA65.S366.p_TBC1D17 Q9HA65_S366s _1_1_366_366 Q9HA65 Q9HA65 TBC1 domain family member 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7288.7288.3 8.18 8.18 8.181 2 1 1 0 475.5834 1344.7698 S366s TMT10 364 (R) RNsLLHGYR (S) RNS(0.99)LLHGY(0.0)R s:Phosphorylated S TBC1D17 73411.6 1 2 3440.1 50.97 HUMAN 1 0.709 2.3515 PEQIKEDSLSEESAD-p Q9BVS4;S380-p PEQIKEDSLSEESAD 0.719569667874495 0.39258981722653 -0.0523333333333333 0.106666666666667 2.6974940372861 5.39805967249634 -0.0523333333333334 0.106666666666667 0.537341763468529 0.288532030971764 -0.658270445852229 1.17627617154726 Q9BVS4 RIOK2 Q9BVS4.S380.p_RIOK2 Q9BVS4_S380sS382s_2_2_380_382 Q9BVS4 Q9BVS4|Q9BVS4-2 Serine/threonine-protein kinase RIO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12928.12928.3 13.65 9.64 2.155 5 2 2 0 956.7584 2708.3263 S380s S382s TMT10 369 (R) SSGDPEQIKEDsLsEESADAR (S) S(0.0)S(0.0)GDPEQIKEDS(0.99)LS(0.99)EES(0.0)ADAR K:TMT10,s:Phosphorylated S RIOK2 63738.3 1 6 1652.1 123.35 HUMAN 2 -2.6975 5.3981 PEQRPLRSPLDNMIR-p P41212;S203-p PEQRPLRSPLDNMIR 0.229977783899196 0.108798292657829 0.188333333333333 -0.174666666666667 12.2652446470043 12.7278403040552 0.188333333333333 -0.174666666666667 0.0593574909955375 0.053360018268447 2.37947186098956 -2.46082241503519 P41212 ETV6 P41212.S203.p_ETV6 P41212_S203s _1_1_203_203 P41212 P41212 Transcription factor ETV6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13311.13311.5 14.22 8.83 13.094 5 1 1 0 687.5508 3353.7698 S203s TMT10 184 (R) SPITTNHRPSPDPEQRPLRsPLDNMIR (R) S(0.0)PIT(0.0)T(0.0)NHRPS(0.0)PDPEQRPLRS(0.99)PLDNMIR s:Phosphorylated S ETV6 53284.3 2 3 2218.1 92.96 HUMAN 1 12.2652 -12.7278 PEQVRHNSMEDAREL-p Q96RY7;S1443-p PEQVRHNSMEDAREL 0.270871529957664 0.052653938596533 -0.207 0.265333333333333 10.7522591114004 17.0583509152275 -0.207 0.265333333333333 0.0840957578852783 0.0196863366911337 -2.11276162870237 3.27163270839071 Q96RY7 IFT140 Q96RY7.S1443.p_IFT140 Q96RY7_S1443s _1_1_1443_1443 Q96RY7 Q96RY7 Intraflagellar transport protein 140 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18397.18397.4 13.64 13.64 2.252 2 1 1 0 916.4064 3582.6339 S1443s TMT10 1434 (R) TVPEQVRHNsMEDARELDEEVVEEADDDP (-) T(0.0)VPEQVRHNS(0.99)MEDARELDEEVVEEADDDP s:Phosphorylated S IFT140 166958.6 2 2 3843.1 41.79 HUMAN 1 -10.7523 17.0584 PERAALETPIIQGQD-p Q8IWT3;T938-p PERAALETPIIQGQD 0.711081228799241 0.441758446756907 -0.0533333333333333 -0.0803333333333333 2.78548304010147 4.72435758935925 -0.0533333333333334 -0.0803333333333333 0.526564644961356 0.33694905373343 -0.67649420943977 -1.05309118179496 Q8IWT3 CUL9 Q8IWT3.T938.p_CUL9 Q8IWT3_T938t _1_1_938_938 Q8IWT3 Q8IWT3|E9PEZ1|Q8IWT3-3 Cullin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26982.26982.3 16.21 16.21 9.352 2 1 1 0 810.766 2350.3179 T938t TMT10 934 (R) AALEtPIIQGQDGSPELLIR (S) AALET(0.99)PIIQGQDGS(0.0)PELLIR t:Phosphorylated T CUL9 285617.3 1 5 1190.1 168.21 HUMAN 1 -2.7855 -4.7244 PERAELGSPRTLSGS-p A0A1B0GW72;S276-p PERAELGSPRTLSGS 1 0.0617104804563686 -9.25185853854297e-18 -0.214 0 16.1041887638147 0 -0.214 1 0.0245234249397754 0 -3.08602305963743 A0A1B0GW72 NotFound A0A1B0GW72.S276.p_NotFound A0A1B0GW72_S276s _1_1_276_276 A0A1B0GW72 A0A1B0GW72 Pleckstrin homology domain-containing family G member 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10606.10606.3 12.48 7.67 6.497 2 1 1 0 644.3302 1851.0074 S276s TMT10 265 (R) HLPYPERAELGsPR (T) HLPY(0.0)PERAELGS(0.99)PR s:Phosphorylated S PLEKHG4B 181102.6 2 1 1118.1 175.42 HUMAN 1 0 -16.1042 PERASESSSEEKDDY-p P18583-5;S1783-p PERASESSSEEKDDY 0.840652400719553 0.345434288793013 -0.029 -0.095 1.456713195339 6.11787816241873 -0.029 -0.095 0.715037272100049 0.244462463406277 -0.384817595905781 -1.30521926529841 P18583 SON P18583.5.S1783.p_SON P18583-5_S1782sS1783s_2_2_1782_1783 P18583-5 P18583-9|P18583-5|P18583-6 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13894.13894.3 8.82 8.82 1.257 8 2 2 0 957.4398 2710.3606 S1782s S1783s TMT10 1766 (R) SAASPVVSSMPERASEssSEEK (D) S(0.0)AAS(0.0)PVVS(0.0)S(0.0)MPERAS(0.0)ES(0.99)S(0.99)S(0.0)EEK K:TMT10,s:Phosphorylated S SON 267429.6 12 45 45.1 778.56 HUMAN 1 -1.4567 -6.1179 PEREKAGSPAPSNRL-p Q9BYW2;S614-p PEREKAGSPAPSNRL 0.597918768837268 0.0658497091461924 0.135333333333333 -0.399 4.12465542109055 15.7190262985166 0.135333333333333 -0.399 0.38684274638008 0.0267976906987636 0.940883839626051 -3.0123420498995 Q9BYW2 SETD2 Q9BYW2.S614.p_SETD2 Q9BYW2_S614s _1_1_614_614 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11373.11373.3 16.22 9.01 3.653 4 1 1 0 755.0654 2183.2185 S614s TMT10 612 (K) AGsPAPSNRLNDSPTLK (K) AGS(0.99)PAPS(0.0)NRLNDS(0.0)PT(0.0)LK K:TMT10,s:Phosphorylated S SETD2 290615.4 3 7 58.1 711.11 HUMAN 1 4.1247 -15.719 PEREKTPSEDKLSVK-p Q8NFC6;S735-p PEREKTPSEDKLSVK 0.377007280567508 0.0140435142649084 -0.133666666666667 0.416333333333333 7.82891170999141 25.6946477545951 -0.133666666666667 0.416333333333333 0.164857545305264 0.0026948538963541 -1.60546668160821 5.21514246291514 Q8NFC6 BOD1L1 Q8NFC6.S735.p_BOD1L1 Q8NFC6_S735s _1_1_735_735 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13347.13347.3 7.79 7.79 1.862 3 1 1 0 624.3553 1791.0831 S735s TMT10 733 (K) TPsEDKLSVK (H) T(0.0)PS(0.99)EDKLS(0.0)VK K:TMT10,s:Phosphorylated S BOD1L1 332628.7 1 9 97.1 603.4 HUMAN 1 -7.8289 25.6946 PERGSMGSLDRLVRR-p O00192;S335-p PERGSMGSLDRLVRR 0.471566782528917 0.0609902697058409 0.097 0.290333333333333 6.02470223504953 16.180716626812 0.097 0.290333333333333 0.249763962873385 0.0240950780439281 1.28896290778026 3.10074538749856 O00192 ARVCF O00192.S335.p_ARVCF O00192_S332sS335s_2_2_332_335 O00192 O00192|E9PDC3|O00192-2|C9JJX6 Armadillo repeat protein deleted in velo-cardio-facial syndrome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28236.28236.5 16.94 16.94 2.651 5 2 2 0 979.4601 4733.3137 S332s S335s TMT10 300 (R) AYEDTADDGGELADERPAFPMVTAPLAQPERGsMGsLDRLVR (R) AY(0.0)EDT(0.0)ADDGGELADERPAFPMVT(0.0)APLAQPERGS(0.99)MGS(0.99)LDRLVR s:Phosphorylated S ARVCF 105324.7 4 11 772.1 227.53 HUMAN 1 6.0247 16.1807 PERHGRDSRDGWGGY-p Q15424;S794-p PERHGRDSRDGWGGY 0.665261908909664 0.00618650355766278 -0.109 0.514666666666667 3.3104103254955 31.8257997179479 -0.109 0.514666666666667 0.466615291981599 0.00065678016461766 -0.782784782746592 6.99545753288853 Q15424 SAFB Q15424.S794.p_SAFB Q15424_S794s _1_1_794_794 Q15424 Q14151|Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5711.5711.4 11.14 6.92 5.702 3 1 1 0 572.7711 2208.0946 S794s TMT10 790 (R) HGRDsRDGWGGYGSDK (R) HGRDS(0.99)RDGWGGY(0.0)GS(0.0)DK K:TMT10,s:Phosphorylated S SAFB 103096.3 2 38 83.1 629.62 HUMAN 1 -3.3104 31.8258 PERLVPVSPLPPKAA-p O95396;S47-p PERLVPVSPLPPKAA 0.34339983130368 0.273556887303566 0.175 0.199 8.62130895535671 7.41581332602773 0.175 0.199 0.13736279037626 0.181308709775546 1.74280982681464 1.53317146293491 O95396 MOCS3 O95396.S47.p_MOCS3 O95396_S47s _1_1_47_47 O95396 O95396 Adenylyltransferase and sulfurtransferase MOCS3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29972.29972.3 16 16 7.375 2 1 1 0 1073.2787 3137.8338 S47s TMT10 28 (K) LASALLAEQEPQPERLVPVsPLPPK (A) LAS(0.0)ALLAEQEPQPERLVPVS(0.99)PLPPK K:TMT10,s:Phosphorylated S MOCS3 50581.2 12 1 3611.1 47.04 HUMAN 1 8.6213 7.4158 PERPSILSASELKEL-p Q9Y520-7;S300-p PERPSILSASELKEL 0.659595024833796 0.453332744849123 0.086 -0.0846666666666667 3.38785108249197 4.57851712094625 0.086 -0.0846666666666667 0.458368634410742 0.348456273559587 0.798145980971908 -1.02602705743272 Q9Y520 PRRC2C Q9Y520.7.S300.p_PRRC2C Q9Y520-7_S300s _1_1_300_300 Q9Y520-7 Q9Y520-7|A0A0A0MS30 Isoform 7 of Protein PRRC2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24620.24620.4 12.58 12.58 1.221 5 1 1 0 719.1251 2793.5187 S300s TMT10 284 (R) GPPPSWASEPERPSILsASELK (E) GPPPS(0.0)WAS(0.0)EPERPS(0.0)ILS(0.99)AS(0.0)ELK K:TMT10,s:Phosphorylated S PRRC2C 317703.2 1 96 36.3 882.05 HUMAN 1 3.3879 -4.5785 PERRFFCSCQTLKSH-p Q9NWW7;S225-p PERRFFCSCQTLKSH 0.771408500809374 0.543408214995881 0.121 -0.332666666666667 2.1616791495679 3.56087433561461 0.121 -0.332666666666667 0.607899918337364 0.440466178512413 0.544316632510045 -0.83207109550342 Q9NWW7 C2orf42 Q9NWW7.S225.p_C2orf42 Q9NWW7_S225sT241t_2_2_225_241 Q9NWW7 Q9NWW7 Uncharacterized protein C2orf42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18791.19005.4 8.47 2.81 1.785 6 2 2 0 895.4269 3417.7611 S225s N235n T241t Hydrogen 222 (R) FFCsCQTLKSHKSnASKDEtAQR (C) FFCS(0.99)CQT(0.0)LKS(0.0)HKS(0.0)N(1.0)AS(0.0)KDET(0.99)AQR C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T C2orf42 65159.4 1 1 6962.1 8.47 HUMAN 1 2.1617 -3.5609 PERRSPGSPVCRADK-p Q86VQ1;S148-p PERRSPGSPVCRADK 0.281655931562463 0.771637506922735 0.187 -0.032 10.4014724209745 1.55743318070422 0.187 -0.032 0.0911701685928928 0.69864520373761 2.05155450993574 -0.408354053277053 Q86VQ1 GLCCI1 Q86VQ1.S148.p_GLCCI1 Q86VQ1_S148s _1_1_148_148 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5216.5216.2 12.6 5.27 1.828 2 1 1 0 584.7729 1088.572 S148s TMT10 145 (R) SPGsPVCR (A) S(0.0)PGS(0.99)PVCR C:Carbamidomethylation,s:Phosphorylated S GLCCI1 58707.2 3 5 307.1 373.49 HUMAN 1 10.4015 -1.5574 PERSPTDSPREGLRV-p P49454;S3179-p PERSPTDSPREGLRV 0.573430275829069 0.0302350363028939 0.148666666666667 -0.319666666666667 4.44484324471556 20.5556167478031 0.148666666666667 -0.319666666666667 0.359348366926838 0.00879910145516405 1.00126261572012 -3.99534748829084 P49454 CENPF P49454.S3179.p_CENPF P49454_S3179s _1_1_3179_3179 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11535.11535.3 9.56 9.56 7.75 4 1 1 0 877.1113 2549.3633 S3179s TMT10 3165 (K) SVPVNNLPERSPTDsPREGLR (V) S(0.0)VPVNNLPERS(0.0)PT(0.0)DS(0.99)PREGLR s:Phosphorylated S CENPF 371067.2 2 35 47.1 771.73 HUMAN 1 4.4448 -20.5556 PERTVLGSRELCDSE-p P0C7T5;S615-p PERTVLGSRELCDSE 0.00956415249523423 0.00110850895865855 -1.05533333333333 -1.31333333333333 47.6732299489589 49.7238451021264 -1.05533333333333 -1.31333333333333 1.70874400978096e-05 1.06565220962222e-05 -14.2276125260452 -15.5057565432407 P0C7T5 ATXN1L P0C7T5.S615.p_ATXN1L P0C7T5_S615s _1_1_615_615 P0C7T5 P0C7T5 Ataxin-1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13314.13314.3 11.25 11.25 2.333 3 1 1 0 697.0185 2009.0738 S615s TMT10 611 (R) TVLGsRELCDSEGK (S) T(0.0)VLGS(0.99)RELCDS(0.0)EGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATXN1L 73818.4 2 8 1155.1 171.78 HUMAN 1 -47.6732 -49.7238 PERYQNLSPVGSGAY-p Q16539-2;S28-p PERYQNLSPVGSGAY 0.743322211178279 0.34044758201983 0.0836666666666667 0.097 2.44842190671071 6.19874598393349 0.0836666666666667 0.097 0.569059672156207 0.239952567692698 0.60596766497366 1.31956858675589 Q16539 MAPK14 Q16539.2.S28.p_MAPK14 Q16539-2_S28s _1_1_28_28 Q16539-2 Q16539|Q16539-2|Q16539-4|Q16539-3|Q16539-5|B5TY33 Isoform CSBP1 of Mitogen-activated protein kinase 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26038.26038.3 16.73 16.73 1.221 6 1 1 0 944.1218 2750.386 S28s TMT10 24 (R) YQNLsPVGSGAYGSVCAAFDTK (T) Y(0.0)QNLS(0.99)PVGS(0.0)GAY(0.0)GS(0.0)VCAAFDT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAPK14 41720.9 1 2 2943.1 65.26 HUMAN 1 2.4484 6.1987 PESAAAQSQENQDTR-p Q9UNF1;S162-p PESAAAQSQENQDTR 0.597752423488761 0.0245293871244246 0.124666666666667 0.338333333333333 4.12835589270911 21.9191897710701 0.124666666666667 0.338333333333333 0.386513271571905 0.00642807629675996 0.941586784370009 4.29895000873227 Q9UNF1 MAGED2 Q9UNF1.S162.p_MAGED2 Q9UNF1_S162s _1_1_162_162 Q9UNF1 Q9UNF1|Q9UNF1-2|Q5H909|Q5H907 Melanoma-associated antigen D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9885.9885.5 23.17 19.98 2.17 5 1 1 0 824.1833 4036.9372 S162s TMT10 138 (K) AQETEAAPSQAPADEPEPESAAAQsQENQDTRPK (V) AQET(0.0)EAAPS(0.0)QAPADEPEPES(0.0)AAAQS(0.99)QENQDT(0.0)RPK K:TMT10,s:Phosphorylated S MAGED2 65124.3 2 8 893.1 204.33 HUMAN 1 4.1284 21.9192 PESAPLKSKMIYASS-p P23528;S113-p PESAPLKSKMIYASS 0.409041787828506 0.760135095590802 0.142666666666667 -0.03 7.15793119295345 1.64524184409776 0.142666666666667 -0.03 0.192400803193439 0.684661355524443 1.48863090455833 -0.42867503332777 P23528 CFL1 P23528.S113.p_CFL1 P23528_S113s _1_1_113_113 P23528 E9PK25|P23528|Q9Y281|G3V1A4|Q9Y281-3 Cofilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29897.29897.5 22.01 18.23 1.125 3 1 1 0 755.8306 3695.1797 S113s TMT10 93 (K) ESKKEDLVFIFWAPESAPLKsK (M) ES(0.0)KKEDLVFIFWAPES(0.0)APLKS(0.99)K K:TMT10,s:Phosphorylated S CFL1 18730.4 1 8 681.1 245.42 HUMAN 1 7.1579 -1.6452 PESEGPSSLDPSQEG-p Q13501;S366-p PESEGPSSLDPSQEG 0.967385376512077 0.313831229480946 -0.00900000000000002 0.0963333333333334 0.280097958627748 6.65215300505836 -0.00900000000000003 0.0963333333333334 0.937540859696138 0.216164662663412 -0.0820706144568923 1.3996086279313 Q13501 SQSTM1 Q13501.S366.p_SQSTM1 Q13501_S365sS366s_2_2_365_366 Q13501 Q13501|Q13501-2 Sequestosome-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27755.27755.3 16.49 16.49 1.267 8 2 2 0 1382.3077 3984.9636 S365s S366s TMT10 345 (K) EVDPSTGELQSLQMPESEGPssLDPSQEGPTGLK (E) EVDPS(0.0)T(0.0)GELQS(0.0)LQMPES(0.0)EGPS(0.99)S(0.99)LDPS(0.0)QEGPT(0.0)GLK K:TMT10,s:Phosphorylated S SQSTM1 48485.1 2 18 541.1 276.49 HUMAN 1 -0.2801 6.6522 PESKKEQTPEHGKKK-p O76021;T340-p PESKKEQTPEHGKKK 0.0447859715508879 0.053305838028925 0.661666666666667 -0.303 29.9397557682576 16.9812891183581 0.661666666666667 -0.303 0.00101396840610367 0.0200387712728486 6.41381504664987 -3.25647245821299 O76021 RSL1D1 O76021.T340.p_RSL1D1 O76021_T340t _1_1_340_340 O76021 O76021|O76021-2 Ribosomal L1 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3664.3664.4 9.81 9.81 99 1 1 1 0 456.0026 1741.0211 T340t TMT10 337 (K) KEQtPEHGK (K) KEQT(1.0)PEHGK K:TMT10,t:Phosphorylated T RSL1D1 55199.7 2 2 643.1 254.92 HUMAN 1 29.9398 -16.9813 PESKKILTPALKKRA-p P57772;T545-p PESKKILTPALKKRA 0.16487753689461 0.0911495316409446 0.229666666666667 0.226666666666667 15.6802198956377 13.7589309443729 0.229666666666667 0.226666666666667 0.0270382145847893 0.0420830206843663 3.00702716787551 2.64720856985629 P57772 EEFSEC P57772.T545.p_EEFSEC P57772_T545t _1_1_545_545 P57772 P57772|P57772-2 Selenocysteine-specific elongation factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17460.17460.3 11.4 11.4 99 1 1 1 0 551.0222 1571.0863 T545t TMT10 542 (K) KILtPALK (K) KILT(1.0)PALK K:TMT10,t:Phosphorylated T EEFSEC 65931.1 3 2 3941.1 40.43 HUMAN 1 15.6802 13.7589 PESPPPASPDGVTEI-p Q96TA1;S646-p PESPPPASPDGVTEI 0.0901040343669965 0.00320981770772267 -1.25733333333333 -0.907 22.246152636921 37.3542339730622 -1.25733333333333 -0.907 0.00596190067332204 0.00018389782920122 -4.37844624413031 -9.00268961046498 Q96TA1 FAM129B Q96TA1.S646.p_FAM129B Q96TA1_S646s _1_1_646_646 Q96TA1 Q96TA1|Q96TA1-2 Niban-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30003.30214.4 28.63 27.08 2.583 5 1 1 0 968.4782 3790.9224 S646s TMT10 621 (K) QVVSVVQDEEVGLPFEASPESPPPAsPDGVTEIR (G) QVVS(0.0)VVQDEEVGLPFEAS(0.0)PES(0.0)PPPAS(0.99)PDGVT(0.0)EIR s:Phosphorylated S FAM129B 84649.8 3 6 1146.1 172.91 HUMAN 1 -22.2462 -37.3542 PESPRRLSLGQGDST-p Q6ZRV2;S1003-p PESPRRLSLGQGDST 0.973184341125227 0.0057657317357258 -0.007 0.499 0.230088066334268 32.3840517519397 -0.00699999999999999 0.499 0.948399231444621 0.000577556963997337 -0.0677742025290316 7.17898775457252 Q6ZRV2 FAM83H Q6ZRV2.S1003.p_FAM83H Q6ZRV2_S1003s _1_1_1003_1003 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7431.7431.4 20.46 20.46 5.365 4 1 1 0 553.261 2130.0534 S1003s Hydrogen 1001 (R) RLsLGQGDSTEAATEERGPR (A) RLS(0.99)LGQGDS(0.0)T(0.0)EAAT(0.0)EERGPR s:Phosphorylated S FAM83H 127633.5 8 28 7.1 1347.23 HUMAN 1 -0.2301 32.3841 PESPRVPSPPPSPRL-p O94827-2;S928-p PESPRVPSPPPSPRL 0.377341542057701 0.256522413893951 0.212666666666667 0.133333333333333 7.82328630990818 7.78235298793953 0.212666666666667 0.133333333333333 0.165071223021497 0.166634415018131 1.60448981320158 1.59688879581343 O94827 PLEKHG5 O94827.2.S928.p_PLEKHG5 O94827-2_S928s _1_1_928_928 O94827-2 O94827-6|O94827-2 Isoform 2 of Pleckstrin homology domain-containing family G member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10347.10347.3 12.34 12.34 1.68 3 1 1 0 627.3267 1799.9965 S928s TMT10 920 (R) APESPRVPsPPPSPR (L) APES(0.0)PRVPS(0.99)PPPS(0.0)PR s:Phosphorylated S PLEKHG5 121312.9 1 3 2914.1 66.07 HUMAN 1 7.8233 7.7824 PESPSEISPIKGSVR-p Q7Z5K2-2;S269-p PESPSEISPIKGSVR 0.119392096977656 0.00278908336687029 -0.853333333333333 -0.71 19.2035803867757 38.6302430409811 -0.853333333333333 -0.71 0.0120127367881147 0.000137080505067785 -3.71007636767998 -9.53201131730327 Q7Z5K2 WAPL Q7Z5K2.2.S269.p_WAPL Q7Z5K2-2_S269s _1_1_269_269 Q7Z5K2-2 Q7Z5K2-3|Q7Z5K2-2 Isoform 2 of Wings apart-like protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17578.17578.4 18.32 8.26 3.798 6 1 1 0 879.4537 3434.8159 S269s TMT10 249 (K) ETNDTWNSQFGKRPESPSEIsPIK (G) ET(0.0)NDT(0.0)WNS(0.0)QFGKRPES(0.0)PS(0.0)EIS(0.99)PIK K:TMT10,s:Phosphorylated S WAPL 138966.1 4 8 244.1 413.16 HUMAN 1 -19.2036 -38.6302 PESQQQNTPPKSEKN-p Q15652;T1978-p PESQQQNTPPKSEKN 0.56846353529606 0.0170400194028213 -0.104 -0.364666666666667 4.51329927382126 24.397412565938 -0.104 -0.364666666666667 0.353728516428815 0.00363294433395704 -1.0140609461654 -4.88685244867992 Q15652 JMJD1C Q15652.T1978.p_JMJD1C Q15652_T1978t _1_1_1978_1978 Q15652 Q15652|Q15652-3|A0A1W2PNZ9 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18414.18414.3 20.03 13.08 4.116 4 1 1 0 990.5103 2889.5417 T1978t TMT10 1966 (K) ISLCMPESQQQNtPPKSEK (N) IS(0.0)LCMPES(0.0)QQQNT(0.99)PPKS(0.0)EK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T JMJD1C 286573.8 4 15 377.1 336.35 HUMAN 1 -4.5133 -24.3974 PESRGHVSPQVELPP-p Q8N5D0;S353-p PESRGHVSPQVELPP 0.521914890520653 0.964453765596116 0.0936666666666667 0.00366666666666669 5.22054137509209 0.224579000721234 0.0936666666666667 0.00465959901675438 0.300570159986927 0.949603047993612 1.14432419548983 0.0661842349410421 Q8N5D0 WDTC1 Q8N5D0.S353.p_WDTC1 Q8N5D0_S353s _1_1_353_353 Q8N5D0 Q8N5D0|Q8N5D0-4|Q8N5D0-2|Q8N5D0-6|Q8N5D0-3|Q8N5D0-5 WD and tetratricopeptide repeats protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20172.20172.3 7.84 7.84 7.841 2 1 1 0 677.3465 1950.0646 S353s TMT10 350 (R) GHVsPQVELPPYLER (V) GHVS(0.99)PQVELPPY(0.0)LER s:Phosphorylated S WDTC1 76945.3 2 1 3148.1 59.18 HUMAN 1 5.2205 0.2246 PESYPYGSPQEKSLD-p Q9HCH0;S613-p PESYPYGSPQEKSLD 0.953621233632934 0.0241846702089274 -0.0106666666666667 -0.417333333333333 0.404988684578547 22.0293957464389 -0.0106666666666667 -0.417333333333333 0.910963825753632 0.00626701054359671 -0.117153678948538 -4.32407414817369 Q9HCH0 NCKAP5L Q9HCH0.S613.p_NCKAP5L Q9HCH0_S613s _1_1_613_613 Q9HCH0 Q9HCH0|Q9HCH0-3|Q9HCH0-2 Nck-associated protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21028.21028.3 17.61 17.61 2.292 6 1 1 0 971.1368 2831.4326 S613s TMT10 596 (R) SPGVPPSPCLPESYPYGsPQEK (S) S(0.0)PGVPPS(0.0)PCLPES(0.0)Y(0.0)PY(0.0)GS(0.99)PQEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NCKAP5L 140323.1 1 10 609.1 261.98 HUMAN 1 -0.405 -22.0294 PETDDSFSDVDCHSN-p Q68D20;S161-p PETDDSFSDVDCHSN 0.150551122281667 0.150566110180289 -0.465666666666667 0.187666666666667 16.568100828984 10.8161278599897 -0.465666666666667 0.187666666666667 0.0220389001409331 0.0828680680483717 -3.17804595292737 2.12298799800684 Q68D20 NotFound Q68D20.S161.p_NotFound Q68D20_S161s _1_1_161_161 Q68D20 Q68D20 Protein PMS2CL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11880.12404.3 20.91 20.91 1.184 5 1 1 0 1051.4321 3072.3199 S161s TMT10 153 (K) APETDDSFsDVDCHSNQEDTGCK (F) APET(0.0)DDS(0.0)FS(0.99)DVDCHS(0.0)NQEDT(0.0)GCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PMS2CL 21136.4 2 9 1932.2 106.31 HUMAN 1 -16.5681 10.8161 PETKEQNSALPTSSQ-p Q9UQ35;S1227-p PETKEQNSALPTSSQ 0.364276252742376 0.00594788143482122 -0.197333333333333 1.381 8.13878244943006 32.1526178101094 -0.197333333333333 1.381 0.153504727510072 0.000609169595534355 -1.65922742052299 7.10242118136865 Q9UQ35 SRRM2 Q9UQ35.S1227.p_SRRM2 Q9UQ35_S1227s _1_1_1227_1227 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27010.27010.3 14.01 13.56 4.435 4 1 1 0 967.7995 2821.4177 S1227s TMT10 1224 (K) EQNsALPTSSQDEELMEVVEK (S) EQNS(0.99)ALPT(0.0)S(0.0)S(0.0)QDEELMEVVEK K:TMT10,s:Phosphorylated S SRRM2 300351.7 1 71 2.1 3310.34 HUMAN 1 -8.1388 32.1526 PETKRPYTVILIERA-p A0A087X020;T129-p PETKRPYTVILIERA 0.0905867676320554 0.0988355476810183 -0.492 0.393333333333333 22.1770927536609 13.2857494410274 -0.492 0.393333333333333 0.0060574623662081 0.0469272447248216 -4.362543794647 2.56124485814425 A0A087X020 NotFound A0A087X020.T129.p_NotFound A0A087X020_T129t _1_1_129_129 A0A087X020 Q9Y3A5|A0A087X020 Ribosome maturation protein SBDS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18256.18256.3 12.59 12.59 12.593 2 1 1 0 523.6311 1488.91 T129t TMT10 126 (K) RPYtVILIER (A) RPY(0.0)T(0.99)VILIER t:Phosphorylated T SBDS 29149.4 2 2 3987.1 39.67 HUMAN 1 -22.1771 13.2857 PETNIDKTPKKAQVS-p O75152;T321-p PETNIDKTPKKAQVS 0.8365161755005 0.00109454193985794 0.0546666666666666 -1.767 1.4968713950349 49.9005830521554 0.0546666666666667 -1.767 0.708455963713452 1.02315562163443e-05 0.394254501307851 -15.6248380756453 O75152 ZC3H11A O75152.T321.p_ZC3H11A O75152_T321t _1_1_321_321 O75152 O75152|E9PQ61 Zinc finger CCCH domain-containing protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12136.12136.5 15.02 15.02 2.074 2 1 1 0 514.0998 2486.5 T321t TMT10 310 (K) KVEAPETNIDKtPK (K) KVEAPET(0.0)NIDKT(0.99)PK K:TMT10,t:Phosphorylated T ZC3H11A 89985.3 5 5 890.1 204.63 HUMAN 1 1.4969 -49.9006 PETVGAQSI______-p E7ETA6;S2015-p PETVGAQSI______ 0.617322588615097 0.559280647615748 0.071 0.066 3.88771379628032 3.40163482350763 0.071 0.066 0.408534389536223 0.456916159363467 0.895604248123282 0.800750923181236 E7ETA6 PCM1 E7ETA6.S2015.p_PCM1 E7ETA6_S2015s _1_1_2015_2015 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22703.22703.4 23.66 22.19 3.064 6 1 1 0 1035.7422 4059.9891 S2015s TMT10 1984 (K) NHLSGEICEMQTEELAGNSETLKEPETVGAQsI (-) NHLS(0.0)GEICEMQT(0.0)EELAGNS(0.0)ET(0.0)LKEPET(0.0)VGAQS(0.99)I C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCM1 229381.8 1 56 13.1 1159.95 HUMAN 1 3.8877 3.4016 PETYEVDSGTTKLAD-p Q3B726;S242-p PETYEVDSGTTKLAD 0.241709649450236 0.0523931863384115 -0.392 0.378333333333333 11.7920403601407 17.0863681699504 -0.392 0.378333333333333 0.0661905460649137 0.0195597447480058 -2.29550177827471 3.27715212031608 Q3B726 TWISTNB Q3B726.S242.p_TWISTNB Q3B726_S242s _1_1_242_242 Q3B726 Q3B726 DNA-directed RNA polymerase I subunit RPA43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9754.9754.4 22.04 22.7 2.21 5 1 1 0 674.3652 2614.4746 S242s TMT10 232 (K) KKDPETYEVDsGTTK (L) KKDPET(0.0)Y(0.0)EVDS(0.99)GT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S TWISTNB 37945.1 4 4 540.1 277.01 HUMAN 1 -11.792 17.0864 PEVDALGSPPALLKS-p Q68DQ2;S931-p PEVDALGSPPALLKS 0.061752633953163 0.0057193778340584 -0.492 -0.667333333333333 26.3637473717448 32.4721514068337 -0.492 -0.667333333333333 0.0023100706526254 0.000565958855038293 -5.39767282828013 -7.20831497873243 Q68DQ2 CRYBG3 Q68DQ2.S931.p_CRYBG3 Q68DQ2_S931s _1_1_931_931 Q68DQ2 Q68DQ2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25235.25235.4 11.85 8.46 10.032 2 1 1 0 734.6468 2855.6009 S931s TMT10 918 (K) YEDKPEPEVDALGsPPALLK (S) Y(0.0)EDKPEPEVDALGS(0.99)PPALLK K:TMT10,s:Phosphorylated S CRYBG3 333308.2 1 9 582.1 265.87 HUMAN 1 -26.3637 -32.4722 PEVDVDITRPDTFIR-p Q9Y625;T454-p PEVDVDITRPDTFIR 0.143638422086766 0.33706197113581 -0.345333333333333 -0.13 17.2115912683183 6.25785293262269 -0.345333333333333 -0.13 0.0190038184659904 0.236708965130578 -3.30442638393272 -1.3300415170986 Q9Y625 GPC6 Q9Y625.T454.p_GPC6 Q9Y625_T454tT458t_2_2_454_458 Q9Y625 Q9Y625|A0A087WT82 Glypican-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.29742.29742.5 8.9 1.77 8.181 4 2 2 0 971.08 4672.4065 N437n N442n N445n T454t T458t M465m TMT10 431 (R) YLPEIMnDGLTnQInNPEVDVDItRPDtFIRQQImALR (V) Y(0.0)LPEIM(0.0)N(0.99)DGLT(0.0)N(0.99)QIN(0.99)N(0.0)PEVDVDIT(0.99)RPDT(0.99)FIRQQIM(0.99)ALR n:Deamidated,t:Phosphorylated T,m:Oxidized methionine GPC6 63761.4 1 1 6879.1 8.9 HUMAN 1 -17.2116 -6.2579 PEVHEDGSPNLAPIP-p O95644;S903-p PEVHEDGSPNLAPIP 0.158297715435374 0.272327121176551 -0.434 -0.205 16.049246892507 7.43985308888897 -0.434 -0.205 0.0248356374127615 0.180307873353407 -3.07765191802809 -1.53735664289161 O95644 NFATC1 O95644.S903.p_NFATC1 O95644_S903s_1_1_903_903 O95644 O95644|O95644-6|F5H4S8 Nuclear factor of activated T-cells, cytoplasmic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33504.33504.5 20.33 20.33 4.43 3 1 1 0 1021.7382 5023.7032 S903s N905n TMT10 894 (R) LLPEVHEDGsPnLAPIPVTVKREPEELDQLYLDDVNEIIR (N) LLPEVHEDGS(0.99)PN(0.99)LAPIPVT(0.0)VKREPEELDQLY(0.0)LDDVN(0.0)EIIR K:TMT10,s:Phosphorylated S,n:Deamidated NFATC1 102439 2 3 1768.3 116.39 HUMAN 1 -16.0492 -7.4399 PEVILLDSDLDEPID-p O00257;S467-p PEVILLDSDLDEPID 0.12656840713573 0.0292510294762908 0.339 -0.389 18.6486074385376 20.7631229202282 0.339 -0.389 0.0136502075913751 0.00838856565488034 3.5947412103649 -4.04070606722395 O00257 CBX4 O00257.S467.p_CBX4 O00257_S467s _1_1_467_467 O00257 O00257|O00257-3 E3 SUMO-protein ligase CBX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35090.35296.4 22.26 23.58 22.264 6 1 1 0 1247.6428 4907.555 S467s TMT10 432 (R) SISTPTCLGGSPAAERPADLPPAAALPQPEVILLDsDLDEPIDLR (C) S(0.0)IS(0.0)T(0.0)PT(0.0)CLGGS(0.0)PAAERPADLPPAAALPQPEVILLDS(0.99)DLDEPIDLR C:Carbamidomethylation,s:Phosphorylated S CBX4 61708.7 2 5 1504.1 135.77 HUMAN 1 18.6486 -20.7631 PEVLKLRSDIAVPIP-p Q08257;S26-p PEVLKLRSDIAVPIP 0.649900104132732 0.0789638563832102 -0.0686666666666667 0.239 3.51065167067644 14.6333018273251 -0.0686666666666667 0.239 0.445589381482816 0.0344088230014642 -0.822352820155576 2.80817761125192 Q08257 CRYZ Q08257.S26.p_CRYZ Q08257_S26s _1_1_26_26 Q08257 Q08257|Q08257-3 Quinone oxidoreductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21262.21262.3 12.19 12.19 99 1 1 1 0 583.0148 1667.062 S26s TMT10 24 (K) LRsDIAVPIPK (D) LRS(1.0)DIAVPIPK K:TMT10,s:Phosphorylated S CRYZ 35377.1 1 1 3722.1 44.52 HUMAN 1 -3.5107 14.6333 PEVPLHDTPERSAAD-p Q96AY2-2;T150-p PEVPLHDTPERSAAD 0.78149643092872 0.848528963816864 -0.09 0.0283333333333334 2.05655246048348 1.00156819906994 -0.0900000000000001 0.0283333333333334 0.622794479011677 0.794041461583337 -0.521289880426396 0.274244730059404 Q96AY2 EME1 Q96AY2.2.T150.p_EME1 Q96AY2-2_T150t _1_1_150_150 Q96AY2-2 Q96AY2-2 Isoform 2 of Crossover junction endonuclease EME1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15303.15303.4 15.6 15.6 3.082 2 1 1 0 632.581 2447.3295 T150t TMT10 142 (K) IPEVPLHDtPERSAADNK (D) IPEVPLHDT(0.99)PERS(0.0)AADNK K:TMT10,t:Phosphorylated T EME1 65747.5 1 7 1591.1 129.29 HUMAN 1 -2.0566 1.0016 PEYEGDDTEGELKEL-p Q9Y6R4;T447-p PEYEGDDTEGELKEL 0.122884208631954 0.0144497591119477 -0.272333333333333 0.47 18.9579271402816 25.5072204507723 -0.272333333333333 0.47 0.0127118068683022 0.00281370106474691 -3.65879316102977 5.16677789638412 Q9Y6R4 MAP3K4 Q9Y6R4.T447.p_MAP3K4 Q9Y6R4_T447t _1_1_447_447 Q9Y6R4 Q9Y6R4|F5H538|Q9Y6R4-2|J3KNB8|F5H4R1 Mitogen-activated protein kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12888.12888.3 14.67 14.67 7.639 2 1 1 0 774.0106 2240.0607 T447t TMT10 437 (K) GNEPEYEGDDtEGELK (E) GNEPEY(0.0)EGDDT(0.99)EGELK K:TMT10,t:Phosphorylated T MAP3K4 183393.1 1 4 1091.1 179.07 HUMAN 1 -18.9579 25.5072 PFADGGKTPDPKMNA-p O75533;T142-p PFADGGKTPDPKMNA 0.321295358159683 0.0277404308908829 0.143666666666667 -0.326333333333333 9.23034005207688 21.0999478998167 0.143666666666667 -0.326333333333333 0.119389461899383 0.00776256428941265 1.84824341150859 -4.11496526566373 O75533 SF3B1 O75533.T142.p_SF3B1 O75533_T142t _1_1_142_142 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25634.25634.4 14.08 9.97 3.125 3 1 1 0 788.9227 3072.7007 T142t TMT10 125 (R) TMIISPERLDPFADGGKtPDPK (M) T(0.0)MIIS(0.0)PERLDPFADGGKT(0.99)PDPK K:TMT10,t:Phosphorylated T SF3B1 146569.5 2 5 53.1 735.77 HUMAN 1 9.2303 -21.0999 PFAPPEVSPEQAKTV-p Q6ZSR9;S93-p PFAPPEVSPEQAKTV 0.385914038502364 0.0127663360268459 -0.129666666666667 -0.43 7.65547347910681 26.3933061480457 -0.129666666666667 -0.43 0.171574464499335 0.00229440132714364 -1.57533101612252 -5.39830412068304 Q6ZSR9 NotFound Q6ZSR9.S93.p_NotFound Q6ZSR9_S93s _1_1_93_93 Q6ZSR9 Q6ZSR9 Uncharacterized protein FLJ45252 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.26703.26703.3 18.82 18.82 99 1 1 1 0 778.0836 2252.2691 S93s TMT10 81 (K) LGGAVPFAPPEVsPEQAK (T) LGGAVPFAPPEVS(1.0)PEQAK K:TMT10,s:Phosphorylated S 38203.6 5 1 3163.1 58.95 HUMAN 1 -7.6555 -26.3933 PFDHPEESIPKPVHT-p Q6NZY4;S22-p PFDHPEESIPKPVHT 0.862492352854935 0.492913533532559 -0.031 -0.0839999999999999 1.25500357777884 4.1069964556427 -0.031 -0.084 0.749030741448474 0.388418900388656 -0.336674491688129 -0.937365695450216 Q6NZY4 ZCCHC8 Q6NZY4.S22.p_ZCCHC8 Q6NZY4_S22s _1_1_22_22 Q6NZY4 Q6NZY4 Zinc finger CCHC domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34152.34152.4 17.25 15.09 1.796 3 1 1 0 930.9563 3640.8161 S22s Acetyl 2 (M) AAEVYFGDLELFEPFDHPEEsIPKPVHTR (F) AAEVY(0.0)FGDLELFEPFDHPEES(0.99)IPKPVHT(0.0)R K:TMT10,s:Phosphorylated S ZCCHC8 79203.5 1 1 443.1 311.3 HUMAN 1 -1.255 -4.107 PFDVKWQSLKDLVKE-p P52272;S86-p PFDVKWQSLKDLVKE 0.301639765350884 0.981391611664702 -0.291 -0.00433333333333329 9.76069695651614 0.116964208296425 -0.291 -0.00433333333333327 0.105664792456961 0.973427428208269 -1.94016372562298 -0.0348748871095987 P52272 HNRNPM P52272.S86.p_HNRNPM P52272_S86s _1_1_86_86 P52272 P52272|A0A087X0X3|P52272-2|M0R0Y6 Heterogeneous nuclear ribonucleoprotein M HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33627.33627.4 16.78 13.29 3.151 2 1 1 0 669.379 2594.5313 S86s TMT10 73 (R) AFITNIPFDVKWQsLK (D) AFIT(0.0)NIPFDVKWQS(0.99)LK K:TMT10,s:Phosphorylated S HNRNPM 77799.7 5 2 830.1 216.57 HUMAN 1 -9.7607 -0.117 PFEDFRISQEHLADH-p P19174-2;S1264-p PFEDFRISQEHLADH 0.944084619198163 0.030879695719171 0.0143333333333333 -0.309333333333333 0.493133245804531 20.4127330351436 0.0143333333333333 -0.309333333333333 0.892661235104855 0.0090934084016206 0.141410441555211 -3.96428489226978 P19174 PLCG1 P19174.2.S1264.p_PLCG1 P19174-2_S1264s _1_1_1264_1264 P19174-2 P19174-2 Isoform 2 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20365.20365.4 23.73 23.73 10.125 3 1 1 0 769.3577 2994.4332 S1264s TMT10 1254 (R) YQQPFEDFRIsQEHLADHFDSR (E) Y(0.0)QQPFEDFRIS(0.99)QEHLADHFDS(0.0)R s:Phosphorylated S PLCG1 149969.8 5 7 1779.1 115.42 HUMAN 1 0.4931 -20.4127 PFFGRDRSPLRRSPP-p Q96PK6;S215-p PFFGRDRSPLRRSPP 0.260386657049657 0.114317064622109 0.165666666666667 0.205666666666667 11.0776408189698 12.4228680984416 0.165666666666667 0.205666666666667 0.0780253846091958 0.0572417879035006 2.16971695894763 2.4063213204793 Q96PK6 RBM14 Q96PK6.S215.p_RBM14 Q96PK6_S215sS220s_2_2_215_220 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12135.12135.4 22.56 18.59 1.101 7 2 2 0 772.3826 2926.5758 S215s S220s Hydrogen 213 (R) DRsPLRRsPPRASYVAPLTAQPATYR (A) DRS(0.99)PLRRS(0.99)PPRAS(0.0)Y(0.0)VAPLT(0.0)AQPAT(0.0)Y(0.0)R s:Phosphorylated S RBM14 69661.6 65 20 151.1 510.8 HUMAN 2 11.0776 12.4229 PFFTLDLSPTEDKSS-p A7KAX9;S871-p PFFTLDLSPTEDKSS 0.136285666158466 0.049992776476002 -0.258666666666667 -0.238333333333333 17.7579836536826 17.3942349948848 -0.258666666666667 -0.238333333333333 0.0167572070055837 0.0182211800897593 -3.41345045311014 -3.33807301634027 A7KAX9 ARHGAP32 A7KAX9.S871.p_ARHGAP32 A7KAX9_S871s _1_1_871_871 A7KAX9 A7KAX9|A7KAX9-2|G3V174 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36053.36053.3 19.51 19.51 4.107 4 1 1 0 750.0578 2168.1891 S871s TMT10 862 (K) LSPFFTLDLsPTEDK (S) LS(0.0)PFFT(0.0)LDLS(0.99)PT(0.0)EDK K:TMT10,s:Phosphorylated S ARHGAP32 232236.5 4 14 159.1 497.4 HUMAN 1 -17.758 -17.3942 PFGDPNLSQPIMPIQ-p Q93008;S2265-p PFGDPNLSQPIMPIQ 0.883910399642057 0.0636334836450819 0.024 0.257 1.05871440064347 15.9292791501123 0.024 0.257 0.78366158808756 0.0255312503983618 0.288542157545872 3.05247782227071 Q93008 USP9X Q93008.S2265.p_USP9X Q93008_S2265s_1_1_2265_2265 Q93008 Q93008|Q93008-1 Probable ubiquitin carboxyl-terminal hydrolase FAF-X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37684.37684.4 13.77 13.77 0.609 3 1 1 0 1122.0641 4388.2733 M2245m N2263n S2265s TMT10 2245 (R) mQSSINGNPPLPNPFGDPnLsQPIMPIQQNVADILFVR (T) M(0.99)QS(0.0)S(0.0)IN(0.0)GN(0.0)PPLPN(0.50)PFGDPN(0.50)LS(0.99)QPIM(0.0)PIQQN(0.0)VADILFVR m:Oxidized methionine,n:Deamidated,s:Phosphorylated S USP9X 295697.8 1 5 1218.1 165.22 HUMAN 1 1.0587 15.9293 PFGDSDDSVEADKSS-p Q14676;S498-p PFGDSDDSVEADKSS 0.769256878109637 0.00974987658001869 0.0443333333333333 0.532333333333333 2.18306792238082 28.3111270470118 0.0443333333333333 0.532333333333333 0.604913403741985 0.00147532361916634 0.548972613377893 5.92558613877394 Q14676 MDC1 Q14676.S498.p_MDC1 Q14676_S498s _1_1_498_498 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15792.15792.3 13.83 13.83 2.277 2 1 1 0 754.0084 2180.0395 S498s TMT10 488 (K) DQPPFGDSDDsVEADK (S) DQPPFGDS(0.0)DDS(0.99)VEADK K:TMT10,s:Phosphorylated S MDC1 227803.2 3 15 6.1 1662.62 HUMAN 1 2.1831 28.3111 PFGKSHKSPADIVKN-p Q9Y376;S11-p PFGKSHKSPADIVKN 0.694378602163351 0.0368677036351886 0.0673333333333333 -0.279333333333333 2.97248852839893 19.2788098553697 0.0673333333333334 -0.279333333333333 0.50437220703077 0.0118064413613873 0.71481884860707 -3.7225319720465 Q9Y376 CAB39 Q9Y376.S11.p_CAB39 Q9Y376_S11s _1_1_11_11 Q9Y376 Q9Y376|A0A087X0K1 Calcium-binding protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9189.9189.4 8.32 8.32 1.437 2 1 1 0 463.0185 1769.0888 S11s TMT10 8 (K) SHKsPADIVK (N) S(0.0)HKS(0.99)PADIVK K:TMT10,s:Phosphorylated S CAB39 40039.4 1 1 6155.1 13.57 HUMAN 1 2.9725 -19.2788 PFGLGSESPYKQPSD-p Q5VT52;S798-p PFGLGSESPYKQPSD 0.610746025519489 0.437300994138513 -0.106 0.0996666666666667 3.96767226830758 4.7857339548031 -0.106 0.0996666666666667 0.401081631772161 0.332220635398833 -0.910945083386901 1.06443498376816 Q5VT52 RPRD2 Q5VT52.S798.p_RPRD2 Q5VT52_S798s_1_1_798_798 Q5VT52 Q5VT52|Q5VT52-3|Q5VT52-2|Q5VT52-5 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19610.19610.5 13.14 8.88 0.697 13 1 1 0 1039.0923 5095.5232 S798s M814m TMT10 781 (R) ELSNSVSTYRPFGLGSEsPYKQPSDGMERPSSLmDSSQEK (F) ELS(0.0)NS(0.0)VS(0.0)T(0.0)Y(0.0)RPFGLGS(0.0)ES(0.99)PY(0.0)KQPS(0.0)DGM(0.50)ERPS(0.0)S(0.0)LM(0.50)DS(0.0)S(0.0)QEK K:TMT10,s:Phosphorylated S,m:Oxidized methionine RPRD2 156473.2 5 20 172.1 488.65 HUMAN 1 -3.9677 4.7857 PFIKTGFSVSVEKST-p E7ETA6;S1229-p PFIKTGFSVSVEKST 0.332256356782789 0.161474137652764 0.145 0.286333333333333 8.93484319034551 10.4133492693185 0.145 0.286333333333333 0.127795535155697 0.090921182006821 1.79708379848356 2.05275477457807 E7ETA6 PCM1 E7ETA6.S1229.p_PCM1 E7ETA6_S1229s _1_1_1229_1229 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18184.18184.3 9.49 7.73 1.127 3 1 1 0 497.9339 1411.8197 S1229s TMT10 1226 (K) TGFsVSVEK (S) T(0.0)GFS(0.99)VS(0.0)VEK K:TMT10,s:Phosphorylated S PCM1 229381.8 1 33 13.1 1159.95 HUMAN 1 8.9348 10.4133 PFKISLNSLCYGDMD-p O75131;S200-p PFKISLNSLCYGDMD 0.911438071310171 0.0736827252619868 -0.0203333333333333 0.269666666666667 0.789967585357431 15.0378126671664 -0.0203333333333333 0.269666666666667 0.833687407028528 0.0313486420739941 -0.220331182600025 2.88365845376567 O75131 CPNE3 O75131.S200.p_CPNE3 O75131_S200s _1_1_200_200 O75131 O75131 Copine-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25180.25180.3 13.12 13.12 3.549 3 1 1 0 685.3308 1974.0077 S200s TMT10 196 (K) ISLNsLCYGDMDK (T) IS(0.0)LNS(0.99)LCY(0.0)GDMDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CPNE3 60985.3 3 4 1209.1 166.69 HUMAN 1 -0.79 15.0378 PFKIVRASNGDAWVE-p P38646;S148-p PFKIVRASNGDAWVE 0.899788025079806 0.0304459451315006 -0.019 0.345666666666667 0.897698907098046 20.5000387305952 -0.019 0.345666666666667 0.813261305457659 0.0089124298994954 -0.24801667928062 3.98324855230957 P38646 HSPA9 P38646.S148.p_HSPA9 P38646_S148s _1_1_148_148 P38646 P38646 Stress-70 protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13998.13998.4 13.87 13.87 99 1 1 1 0 562.7969 2168.1977 S148s TMT10 144 (K) IVRAsNGDAWVEAHGK (L) IVRAS(1.0)NGDAWVEAHGK K:TMT10,s:Phosphorylated S HSPA9 73964.5 1 25 367.2 341.38 HUMAN 1 -0.8977 20.5 PFKLSGLSFKRNRKE-p P49006;S104-p PFKLSGLSFKRNRKE 0.440361201395823 0.00987532593183393 -0.26 -1.242 6.56225719343334 28.213930342037 -0.26 -1.242 0.220685744723548 0.00150871415783331 -1.38414937250421 -5.89796074441355 P49006 MARCKSL1 P49006.S104.p_MARCKSL1 P49006_S104s _1_1_104_104 P49006 P49006 MARCKS-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22814.22814.2 10.44 4.47 3.264 2 1 1 0 645.3688 1209.7607 S104s TMT10 100 (K) LSGLsFK (R) LS(0.0)GLS(0.99)FK K:TMT10,s:Phosphorylated S MARCKSL1 19585.5 10 7 402.1 327.42 HUMAN 1 -6.5623 -28.2139 PFLAKLQSPIKEENT-p Q9NS73;S91-p PFLAKLQSPIKEENT 0.923792422718996 0.893796276220667 -0.032 -0.0336666666666667 0.678074359277746 0.683928860669527 -0.032 -0.0336666666666667 0.855445929393664 0.854293523490784 -0.191055705215029 -0.192582897198567 Q9NS73 MBIP Q9NS73.S91.p_MBIP Q9NS73_S91s _1_1_91_91 Q9NS73 Q9NS73|Q9NS73-5|Q9NS73-2|A0A087X1L0|Q9NS73-3 MAP3K12-binding inhibitory protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17400.17400.3 16.65 9.71 3.665 3 1 1 0 851.4511 2472.371 S91s TMT10 89 (K) LQsPIKEENTTAVEEIGR (T) LQS(0.99)PIKEENT(0.0)T(0.0)AVEEIGR K:TMT10,s:Phosphorylated S MBIP 39566 1 1 4339.1 33.23 HUMAN 1 -0.6781 -0.6839 PFLDLGKSFHSQQKE-p Q8NI35;S836-p PFLDLGKSFHSQQKE 0.669784501287118 0.0158185523484875 0.105666666666667 -0.703333333333333 3.25967053493695 24.8898639907844 0.105666666666667 -0.703333333333333 0.472098854331828 0.00324349774942769 0.772678388163556 -5.00971980040043 Q8NI35 INADL Q8NI35.S836.p_INADL Q8NI35_S836s _1_1_836_836 Q8NI35 Q8NI35|Q8NI35-2|Q8NI35-3|Q8NI35-4|A0A087WUZ6|A0A0X1KG69 InaD-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5340.5340.3 9.3 9.3 4.423 2 1 1 0 467.2422 1319.7472 S836s TMT10 836 (K) sFHSQQK (E) S(0.99)FHS(0.0)QQK K:TMT10,s:Phosphorylated S PATJ 197163.3 1 12 127.1 542.92 HUMAN 1 3.2597 -24.8899 PFLQKQLTQPETHFG-p Q9UJU6;T291-p PFLQKQLTQPETHFG 0.157981462649393 0.00578727188411353 0.403333333333333 -0.523 16.0776594412895 32.3516488161306 0.403333333333334 -0.523 0.0246736872678665 0.000581882261934258 3.08311593772407 -7.16822638707408 Q9UJU6 DBNL Q9UJU6.T291.p_DBNL Q9UJU6_T291t_1_1_291_291 Q9UJU6 Q9UJU6-3|Q9UJU6-2|B4DDD6|Q9UJU6-6|Q9UJU6-4 Drebrin-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13015.13015.3 13.8 11.52 13.797 3 1 1 0 809.0633 2362.2375 Q289q T291t Hydrogen 289 (K) qLtQPETHFGREPAAAISRPR (A) Q(1.0)LT(0.99)QPET(0.0)HFGREPAAAIS(0.0)RPR q:Pyroglutamic acid,t:Phosphorylated T DBNL 48491.7 4 9 1388.1 147.4 HUMAN 1 16.0777 -32.3516 PFLRPEVSDGQITVK-p Q9C0B5;S274-p PFLRPEVSDGQITVK 0.269424134699647 0.020176416743495 -0.172 -0.316 10.7962621802561 23.2164858386039 -0.172 -0.316 0.0832479949054617 0.00476816654367218 -2.12045320312037 -4.60057635477518 Q9C0B5 ZDHHC5 Q9C0B5.S274.p_ZDHHC5 Q9C0B5_S274s _1_1_274_274 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26057.26057.4 12.66 12.66 1.351 3 1 1 0 726.6681 2823.6861 S274s TMT10 261 (K) TIVIRPPFLRPEVsDGQITVK (I) T(0.0)IVIRPPFLRPEVS(0.99)DGQIT(0.0)VK K:TMT10,s:Phosphorylated S ZDHHC5 78285 3 2 134.1 530.74 HUMAN 1 -10.7963 -23.2165 PFPEDLKSLDLFKKE-p P40189;S710-p PFPEDLKSLDLFKKE 0.187294971032731 0.0199379671196489 -0.637 0.415333333333333 14.277529846361 23.311639806905 -0.637 0.415333333333333 0.0373462513127013 0.00466483212562596 -2.74401729667363 4.62321874070904 P40189 IL6ST P40189.S710.p_IL6ST P40189_S710s _1_1_710_710 P40189 P40189|P40189-3 Interleukin-6 receptor subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21706.21706.3 9.3 9.3 99 1 1 1 0 539.9928 1537.9921 S710s TMT10 710 (K) sLDLFKK (E) S(1.0)LDLFKK K:TMT10,s:Phosphorylated S IL6ST 104561.7 1 2 2726.1 72.62 HUMAN 1 -14.2775 23.3116 PFPQVIKSKGGVVGI-p P04075;S100-p PFPQVIKSKGGVVGI 0.491451108987016 0.0660980962173286 0.199666666666667 -0.405 5.6801244308435 15.6909532395285 0.199666666666667 -0.405 0.27038808934031 0.0269714736651474 1.22736377020875 -3.00699839383438 P04075 ALDOA P04075.S100.p_ALDOA P04075_S100s _1_1_100_100 P04075 P04075|H3BQN4|P00883 Fructose-bisphosphate aldolase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15467.15467.4 7.31 7.31 99 1 1 1 0 582.0795 2245.3272 S100s TMT10 88 (K) ADDGRPFPQVIKsK (G) ADDGRPFPQVIKS(1.0)K K:TMT10,s:Phosphorylated S ALDOA 39875.7 1 4 1050.1 183.91 HUMAN 1 5.6801 -15.691 PFQIPPPSPDSKKKS-p Q86W92-2;S573-p PFQIPPPSPDSKKKS 0.419598745385739 0.223833513329335 0.140666666666667 -0.122 6.96119841815208 8.56358463260716 0.140666666666667 -0.122 0.201316864741808 0.139200737667076 1.45421947760221 -1.732225694515 Q86W92 PPFIBP1 Q86W92.2.S573.p_PPFIBP1 Q86W92-2_S573s _1_1_573_573 Q86W92-2 Q86W92|Q86W92-2|Q86W92-4|Q86W92-3 Isoform 2 of Liprin-beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21105.21105.3 16.89 14.29 2.743 3 1 1 0 683.6896 1969.0795 S573s TMT10 564 (R) NSPFQIPPPsPDSK (K) NS(0.0)PFQIPPPS(0.99)PDS(0.0)K K:TMT10,s:Phosphorylated S PPFIBP1 113749.6 7 12 449.1 309.07 HUMAN 1 6.9612 -8.5636 PFQSGRITPPRRAPS-p Q13233;T285-p PFQSGRITPPRRAPS 0.794385697846618 0.0578226709673603 -0.038 -0.302 1.92984064107315 16.4917504054304 -0.038 -0.302 0.641233105400061 0.0224297771895112 -0.493208073190225 -3.16087118461023 Q13233 MAP3K1 Q13233.T285.p_MAP3K1 Q13233_T285t _1_1_285_285 Q13233 Q13233 Mitogen-activated protein kinase kinase kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18203.18203.3 9.21 9.21 2.159 3 1 1 0 649.6857 1867.0751 T285t TMT10 274 (R) VSPVPFQSGRItPPR (R) VS(0.0)PVPFQS(0.0)GRIT(0.99)PPR t:Phosphorylated T MAP3K1 166521 2 7 505.1 289.91 HUMAN 1 -1.9298 -16.4918 PFRDRSNTLNEKPAL-p Q9UMZ2;T1100-p PFRDRSNTLNEKPAL 0.0256628831414159 0.00212228854410704 -0.676333333333333 -1.12766666666667 36.9273086801946 41.541107651903 -0.676333333333333 -1.12766666666667 0.000202893966247879 7.01276417670726e-05 -8.84996590151995 -10.846724517066 Q9UMZ2 SYNRG Q9UMZ2.T1100.p_SYNRG Q9UMZ2_T1100t _1_1_1100_1100 Q9UMZ2 Q9UMZ2|Q9UMZ2-5|Q9UMZ2-7|Q9UMZ2-3 Synergin gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17813.17813.3 13.72 13.72 1.175 2 1 1 0 621.0093 1781.0482 T1100t Hydrogen 1098 (R) SNtLNEKPALPVIR (D) S(0.0)NT(0.99)LNEKPALPVIR K:TMT10-Lys-Only,t:Phosphorylated T SYNRG 141393.5 4 18 236.1 418.49 HUMAN 1 -36.9273 -41.5411 PFRGRSRSAPPNLWA-p Q92934;S99-p PFRGRSRSAPPNLWA 0.0721955710812666 0.0105407926544461 -0.414 -0.534 24.5624381474221 27.7262560444118 -0.414 -0.534 0.00349748761481622 0.00168800759191272 -4.93380264521553 -5.7608406835368 Q92934 BAD Q92934.S99.p_BAD Q92934_S99s _1_1_99_99 Q92934 Q92934 Bcl2-associated agonist of cell death HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13561.14135.2 18.39 12.95 99 1 1 1 0 645.8031 1210.6327 S99s Hydrogen 99 (R) sAPPNLWAAQR (Y) S(1.0)APPNLWAAQR s:Phosphorylated S BAD 18391.6 5 3 1955.1 105.21 HUMAN 1 -24.5624 -27.7263 PFRQKRPSPSRTPEE-p Q6P4R8;S176-p PFRQKRPSPSRTPEE 0.918430174900821 0.206334084894557 0.026 -0.188 0.721567800000075 9.01663159907616 0.026 -0.188 0.846921620843766 0.125411349198261 0.202500368764372 -1.8105893511623 Q6P4R8 NFRKB Q6P4R8.S176.p_NFRKB Q6P4R8_S176s _1_1_176_176 Q6P4R8 Q6P4R8-2|Q6P4R8-3 Nuclear factor related to kappa-B-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4566.4566.4 8.12 6.02 1.419 3 1 1 0 523.763 2012.0623 S176s TMT10 174 (K) RPsPSRTPEEREWR (T) RPS(0.99)PS(0.0)RT(0.0)PEEREWR s:Phosphorylated S NFRKB 139455.1 2 1 791.1 224.91 HUMAN 1 0.7216 -9.0166 PFSELSDSDLEEKSS-p Q6NUN7-2;S216-p PFSELSDSDLEEKSS 0.424226533641084 0.641159764413042 -0.111333333333333 -0.0476666666666666 6.86455276135182 2.62927491597467 -0.111333333333333 -0.0476666666666666 0.205847086199513 0.545848986666012 -1.43728243525624 -0.643968569342225 Q6NUN7 C11orf63 Q6NUN7.2.S216.p_C11orf63 Q6NUN7-2_S216s _1_1_216_216 Q6NUN7-2 Q6NUN7|Q6NUN7-2 Isoform 2 of Jhy protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19489.19489.3 17.1 17.1 2.702 4 1 1 0 826.7591 2398.2956 S216s TMT10 207 (R) SKPFSELSDsDLEEK (S) S(0.0)KPFS(0.0)ELS(0.0)DS(0.99)DLEEK K:TMT10,s:Phosphorylated S JHY 34827.9 1 1 4631.1 28.6 HUMAN 1 -6.8646 -2.6293 PFSGGQDSFSKFTME-p Q5VT06;S1675-p PFSGGQDSFSKFTME 0.166211549723019 0.0495679340941532 -0.24 -0.281 15.5904698874963 17.4516783279129 -0.24 -0.281 0.0276027919001569 0.0179817587705994 -2.98994533774554 -3.34949557905876 Q5VT06 CEP350 Q5VT06.S1675.p_CEP350 Q5VT06_S1675s _1_1_1675_1675 Q5VT06 Q5VT06 Centrosome-associated protein 350 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24890.24890.3 13.18 11.43 2.819 3 1 1 0 728.0154 2102.0629 S1675s TMT10 1664 (K) ELNMPFSGGQDsFSK (F) ELNMPFS(0.0)GGQDS(0.99)FS(0.0)K K:TMT10,s:Phosphorylated S CEP350 352521.4 2 14 265.1 395.34 HUMAN 1 -15.5905 -17.4517 PFSSSSSSKHSSPSG-p P25054;S2768-p PFSSSSSSKHSSPSG 0.237800187730078 0.875252582774429 -0.543 -0.0236666666666667 11.9544894932338 0.813918774151988 -0.543 -0.0236666666666667 0.063760402604404 0.829102305094325 -2.3242648910986 -0.226505927971157 P25054 APC P25054.S2768.p_APC P25054_S2768s _1_1_2768_2768 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12234.12234.3 8.18 8.18 1.186 7 1 1 0 518.2615 1472.7997 S2768s TMT10 2760 (R) TPFSSSSSsK (H) T(0.0)PFS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.99)K K:TMT10,s:Phosphorylated S APC 313808.5 1 51 33.1 890.71 HUMAN 1 -11.9545 -0.8139 PFSTGQESPTAENAR-p Q9Y4W2;S617-p PFSTGQESPTAENAR 0.468355255528321 0.101526150575264 0.126 0.49 6.08433086078597 13.127807032606 0.126 0.49 0.246358138529191 0.0486652878740645 1.29957252192644 2.53271680483383 Q9Y4W2 LAS1L Q9Y4W2.S617.p_LAS1L Q9Y4W2_S617s _1_1_617_617 Q9Y4W2 Q9Y4W2|Q9Y4W2-2|Q9Y4W2-3 Ribosomal biogenesis protein LAS1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19156.19156.2 16.16 16.16 1.124 4 1 1 0 1159.0222 2237.0706 S617s TMT10 606 (R) MEVGPFSTGQEsPTAENAR (L) MEVGPFS(0.0)T(0.0)GQES(0.99)PT(0.0)AENAR s:Phosphorylated S LAS1L 84033.3 4 5 1725.1 119.4 HUMAN 1 6.0843 13.1278 PFSWETKSQMEFSIS-p Q9H425;S129-p PFSWETKSQMEFSIS 0.776758299864296 0.0038649686925988 -0.0706666666666667 0.636666666666667 2.10529269505813 35.6750560108634 -0.0706666666666667 0.636666666666667 0.615844022583755 0.000270703829108318 -0.531995628846103 8.34607534119655 Q9H425 C1orf198 Q9H425.S129.p_C1orf198 Q9H425_S129s_1_1_129_129 Q9H425 Q9H425 Uncharacterized protein C1orf198 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26747.26747.4 13.35 8.17 12.286 8 1 1 0 901.2076 3520.8358 S129s N145n TMT10 129 (K) sQMEFSISALSIQEPSnGTAASEPRPLSK (A) S(0.99)QMEFS(0.0)IS(0.0)ALS(0.0)IQEPS(0.0)N(1.0)GT(0.0)AAS(0.0)EPRPLS(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated C1orf198 36459.9 1 3 1196.1 167.35 HUMAN 1 -2.1053 35.6751 PFTLNSGSPEKTCSQ-p P42695;S1384-p PFTLNSGSPEKTCSQ 0.199341528435404 0.380728624405919 -0.210333333333333 -0.157666666666667 13.6277348963814 5.57318908727218 -0.210333333333333 -0.157666666666667 0.0433737039026601 0.27712843630664 -2.62482049924228 -1.2078699832788 P42695 NCAPD3 P42695.S1384.p_NCAPD3 P42695_S1382sS1384s_2_2_1382_1384 P42695 P42695 Condensin-2 complex subunit D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34624.34624.3 15.02 11.63 1.697 4 2 2 0 755.3834 2104.2054 S1382s S1384s TMT10 1372 (R) SLGVLPFTLNsGsPEK (T) S(0.0)LGVLPFT(0.0)LNS(0.99)GS(0.99)PEK K:TMT10,s:Phosphorylated S NCAPD3 171055.8 5 12 1254.1 161.61 HUMAN 1 -13.6277 -5.5732 PFVKTVASPGVTVEE-p P31939;S112-p PFVKTVASPGVTVEE 0.525170023338528 0.678786912203452 0.0893333333333333 -0.0453333333333333 5.17351024046453 2.29979503958698 0.0893333333333333 -0.0453333333333334 0.303842818464389 0.588871445827673 1.13576177563011 -0.574145303471751 P31939 ATIC P31939.S112.p_ATIC P31939_S112s _1_1_112_112 P31939 P31939|P31939-2 Bifunctional purine biosynthesis protein PURH HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36922.36922.3 24.65 24.65 1.522 4 1 1 0 954.8409 2782.54 S112s TMT10 109 (K) TVAsPGVTVEEAVEQIDIGGVTLLR (A) T(0.0)VAS(0.99)PGVT(0.0)VEEAVEQIDIGGVT(0.0)LLR s:Phosphorylated S ATIC 65128.2 3 2 1978.1 104.52 HUMAN 1 5.1735 -2.2998 PFVTSDRSKNRKRHF-p P61254;S12-p PFVTSDRSKNRKRHF 0.874358570345857 0.0217203267172977 -0.0256666666666667 -0.558333333333333 1.14098091866575 22.7399813906787 -0.0256666666666667 -0.558333333333333 0.768956740357011 0.00532110539331397 -0.308877503544141 -4.48827341543323 P61254 RPL26 P61254.S12.p_RPL26 P61254_S12s _1_1_12_12 P61254 P61254|Q9UNX3|J3QQV1|J3QQQ9|J3KSS0 60S ribosomal protein L26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18711.18711.3 12.82 12.82 2.451 3 1 1 0 612.6525 1755.9794 S12s TMT10 3 (K) FNPFVTSDRsK (N) FNPFVT(0.0)S(0.0)DRS(0.99)K K:TMT10,s:Phosphorylated S RPL26 17257.9 2 1 2947.1 65.03 HUMAN 1 -1.141 -22.74 PFVVPVASPSGDARR-p P21333-2;S2319-p PFVVPVASPSGDARR 0.778036304173139 0.621821350707836 0.0536666666666667 0.0503333333333333 2.0937591852783 2.80580704913501 0.0536666666666667 0.0503333333333333 0.617481686237914 0.524106197340123 0.52946700210207 0.680593731808616 P21333 FLNA P21333.2.S2319.p_FLNA P21333-2_S2319s _1_1_2319_2319 P21333-2 P21333|P21333-2 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25195.25195.4 18.63 16.85 1.415 3 1 1 0 694.8346 2696.3518 S2319s TMT10 2303 (K) FNEEHIPDSPFVVPVAsPSGDAR (R) FNEEHIPDS(0.0)PFVVPVAS(0.99)PS(0.0)GDAR s:Phosphorylated S FLNA 282751.6 3 18 198.1 454.47 HUMAN 1 2.0938 2.8058 PGAAGAGSE______-p C9JI98;S175-p PGAAGAGSE______ 0.369489108717469 0.150956174272158 -0.165333333333333 -0.17 8.02116073895291 10.7989843752452 -0.165333333333333 -0.17 0.157718967784413 0.0831958306998289 -1.63883124732449 -2.11999345251116 C9JI98 TMEM238 C9JI98.S175.p_TMEM238 C9JI98_S175s _1_1_175_175 C9JI98 C9JI98 Transmembrane protein 238 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27268.27268.2 18.47 18.47 10.25 2 1 1 0 961.475 1841.9806 S175s TMT10 159 (R) LQLATLEAGPGAAGAGsE (-) LQLAT(0.0)LEAGPGAAGAGS(0.99)E s:Phosphorylated S TMEM238 18153.7 1 3 4240.1 34.92 HUMAN 1 -8.0212 -10.799 PGADMSHSL______-p Q9Y399;S295-p PGADMSHSL______ 0.455145758341492 0.00410027641213345 0.165333333333333 0.569666666666667 6.30668433903111 35.1458455726792 0.165333333333333 0.569666666666667 0.234062352714672 0.000305784482522915 1.33901832233041 8.14805976035124 Q9Y399 MRPS2 Q9Y399.S295.p_MRPS2 Q9Y399_S295s _1_1_295_295 Q9Y399 Q9Y399 28S ribosomal protein S2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12136.12136.4 18.85 18.85 1.177 2 1 1 0 748.865 2912.4725 S295s TMT10 273 (R) LQGQKEPGDQGPAHPPGADMSHsL (-) LQGQKEPGDQGPAHPPGADMS(0.0)HS(0.99)L K:TMT10,s:Phosphorylated S MRPS2 33533.9 1 2 4347.1 33.06 HUMAN 1 6.3067 35.1458 PGAGGPATPSKATRF-p I3L2J0;T1492-p PGAGGPATPSKATRF 0.358152095290666 0.00382781228923629 0.157666666666667 -0.585666666666667 8.28942988211317 35.8084982500589 0.157666666666667 -0.585666666666667 0.148271271473321 0.000262512613066736 1.68533531689297 -8.396664920399 I3L2J0 NotFound I3L2J0.T1492.p_NotFound I3L2J0_T1492t _1_1_1492_1492 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11442.11442.4 22.09 17.72 3.059 5 1 1 0 777.9024 3028.6216 T1492t TMT10 1468 (K) AQESGQGSTAGPLRPPPPGAGGPAtPSK (A) AQES(0.0)GQGS(0.0)T(0.0)AGPLRPPPPGAGGPAT(0.99)PS(0.0)K K:TMT10,t:Phosphorylated T CIC 259056.7 2 25 23.1 999.57 HUMAN 1 8.2894 -35.8085 PGAGGRLSPENNQVL-p Q16514;S51-p PGAGGRLSPENNQVL 0.58458964676907 0.00774620725295617 -0.0753333333333333 0.456 4.29190598072044 30.1365321956086 -0.0753333333333334 0.456 0.372228311204241 0.000969051326633429 -0.972532426251229 6.46346513941756 Q16514 TAF12 Q16514.S51.p_TAF12 Q16514_S51s _1_1_51_51 Q16514 Q16514|Q16514-2 Transcription initiation factor TFIID subunit 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18493.18493.4 18.66 13.55 3.996 3 1 1 0 661.8619 2564.4561 S51s TMT10 40 (K) IPGTPGAGGRLsPENNQVLTK (K) IPGT(0.0)PGAGGRLS(0.99)PENNQVLT(0.0)K K:TMT10,s:Phosphorylated S TAF12 18038.3 15 3 2572.1 78.13 HUMAN 1 -4.2919 30.1365 PGAGSLGSPASQRKD-p E9PC47;S340-p PGAGSLGSPASQRKD 0.673607064938493 0.0687431411230149 -0.0636666666666667 -0.251666666666667 3.21602379827247 15.4651334278306 -0.0636666666666667 -0.251666666666667 0.476867384978303 0.0284110089680245 -0.763957794668978 -2.9641428532327 E9PC47 NotFound E9PC47.S340.p_NotFound E9PC47_S340s _1_1_340_340 E9PC47 E9PC47|P53667|P53667-2|P53667-4 LIM domain kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7761.7761.4 13.43 13.43 1.413 6 1 1 0 664.8381 2576.3615 S340s TMT10 326 (R) SCSIDRSPGAGSLGsPASQRK (D) S(0.0)CS(0.0)IDRS(0.0)PGAGS(0.0)LGS(0.99)PAS(0.0)QRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LIMK1 77009.3 3 4 2794.1 70.37 HUMAN 1 -3.216 -15.4651 PGAKRRYSDPPTYCL-p Q13459;S2141-p PGAKRRYSDPPTYCL 0.814399806622497 0.380302219265518 0.0353333333333333 0.102666666666667 1.71297219885193 5.58065409359271 0.0353333333333333 0.102666666666667 0.674066556129165 0.276652494600743 0.444255789897078 1.20921324343798 Q13459 MYO9B Q13459.S2141.p_MYO9B Q13459_S2141s _1_1_2141_2141 Q13459 Q13459|M0R0P8 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11458.11458.3 9.71 9.71 3.678 6 1 1 0 849.3943 2466.2033 S2141s TMT10 2138 (K) RRYsDPPTYCLPPASGQTNG (-) RRY(0.0)S(0.99)DPPT(0.0)Y(0.0)CLPPAS(0.0)GQT(0.0)NG C:Carbamidomethylation,s:Phosphorylated S MYO9B 244993.9 3 22 211.1 438.12 HUMAN 1 1.713 5.5807 PGAKSQESQEADEQL-p O75410;S94-p PGAKSQESQEADEQL 0.303423649713577 0.650239107128444 0.146666666666667 -0.0443333333333333 9.70346246947336 2.5514675616872 0.146666666666667 -0.0443333333333333 0.107066536293163 0.55571643863622 1.93023466391801 -0.62765825492798 O75410 TACC1 O75410.S94.p_TACC1 O75410_S94s _1_1_94_94 O75410 O75410-2|O75410-7|R4GMT7 Transforming acidic coiled-coil-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27305.27305.3 18.63 18.63 1.189 2 1 1 0 852.7534 2476.2819 S94s TMT10 91 (K) SQEsQEADEQLVAEVVEK (C) S(0.0)QES(0.99)QEADEQLVAEVVEK K:TMT10,s:Phosphorylated S TACC1 88648.6 1 5 442.1 311.73 HUMAN 1 9.7035 -2.5515 PGALPPPSPKLKDED-p Q86UK7;S437-p PGALPPPSPKLKDED 0.117419537114798 0.00562327732245538 -0.364 -0.552333333333333 19.3520311502305 32.6115930459584 -0.364 -0.552333333333333 0.0116090554337867 0.000548075887019456 -3.74124852770343 -7.25493845738278 Q86UK7 ZNF598 Q86UK7.S437.p_ZNF598 Q86UK7_S437s _1_1_437_437 Q86UK7 Q86UK7|H3BQQ2 E3 ubiquitin-protein ligase ZNF598 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23670.23670.5 24.63 24.63 6.412 8 1 1 0 1016.7256 4999.6078 S437s TMT10 395 (R) TQGEGPGPKETSTNGPVSQEAFSVTGPAAPGCVGVPGALPPPsPK (L) T(0.0)QGEGPGPKET(0.0)S(0.0)T(0.0)NGPVS(0.0)QEAFS(0.0)VT(0.0)GPAAPGCVGVPGALPPPS(0.99)PK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF598 100461 4 2 2531.2 79.67 HUMAN 1 -19.352 -32.6116 PGAPQAPSPPQGSPQ-p Q96RY5;S70-p PGAPQAPSPPQGSPQ 0.984413225811297 0.511605430881592 0.00366666666666666 0.148666666666667 0.137629673222146 3.90358094116567 0.00366666666666667 0.148666666666667 0.968806474852821 0.407044514028644 0.0409470654170168 0.89850407682461 Q96RY5 CRAMP1 Q96RY5.S70.p_CRAMP1 Q96RY5_S70s _1_1_70_70 Q96RY5 Q96RY5 Protein cramped-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13349.13349.4 17.46 16.31 3.604 2 1 1 0 848.6613 3311.6507 S70s TMT10 54 (R) AGADGPPAPPGAPQAPsPPQGSPQDQHHFLR (S) AGADGPPAPPGAPQAPS(0.99)PPQGS(0.0)PQDQHHFLR s:Phosphorylated S CRAMP1 135914.1 1 1 647.1 254.68 HUMAN 1 0.1376 3.9036 PGAQLGASFLQARHG-p Q9NWW5;S23-p PGAQLGASFLQARHG 0.662380157004156 0.10395947756071 -0.0966666666666667 -0.213666666666667 3.35123642619511 12.9877761973313 -0.0966666666666667 -0.213666666666667 0.462249401344736 0.0502599879654905 -0.790892517959397 -2.50749027652972 Q9NWW5 CLN6 Q9NWW5.S23.p_CLN6 Q9NWW5_S23s _1_1_23_23 Q9NWW5 Q9NWW5|H3BUT1|A0A1B0GUD2|H3BUV4|A0A0S2Z5D0|H3BTY4|A0A1B0GTV3|H3BNF1|H3BRN7|A0A1B0GW73 Ceroid-lipofuscinosis neuronal protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19110.19110.3 16.67 16.67 8.35 2 1 1 0 782.7378 2266.2254 S23s TMT10 8 (R) QHLGATGGPGAQLGAsFLQAR (H) QHLGAT(0.0)GGPGAQLGAS(0.99)FLQAR s:Phosphorylated S CLN6 36032.6 1 1 4501.1 30.64 HUMAN 1 -3.3512 -12.9878 PGATGGDSPHLQPAE-p A0A0A0MQW0;S17-p PGATGGDSPHLQPAE 0.440934916296252 0.00649062992679106 0.102 0.475666666666667 6.55158751134628 31.4572344480366 0.102 0.475666666666667 0.221228588723699 0.000714951456425156 1.38226932056053 6.87643542135204 A0A0A0MQW0 NotFound A0A0A0MQW0.S17.p_NotFound A0A0A0MQW0_S17s _1_1_17_17 A0A0A0MQW0 Q9P2K5|A0A0A0MR39|Q9P2K5-2|A0A0A0MQW0|Q9P2K5-4|A0A087WWC8 Myelin expression factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13550.13550.3 21.1 16.68 2.2 2 1 1 0 892.4269 2595.3001 S17s TMT10 7 (K) AEVPGATGGDsPHLQPAEPPGEPR (R) AEVPGAT(0.0)GGDS(0.99)PHLQPAEPPGEPR s:Phosphorylated S MYEF2 62184.4 15 1 670.1 249.19 HUMAN 1 6.5516 31.4572 PGATGIGTPAAGPGE-p P08913;T344-p PGATGIGTPAAGPGE 0.39562150482154 0.702323671695879 0.135333333333333 0.0676666666666667 7.43065926423787 2.10905029588317 0.135333333333333 0.0676666666666667 0.180689981562967 0.615311412732184 1.53620695727606 0.532755712437546 P08913 ADRA2A P08913.T344.p_ADRA2A P08913_T344t _1_1_344_344 P08913 P08913 Alpha-2A adrenergic receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7333.7333.3 12.03 12.03 3.711 2 1 1 0 687.3412 1980.046 T344t TMT10 335 (R) RGPGATGIGtPAAGPGEER (V) RGPGAT(0.0)GIGT(0.99)PAAGPGEER t:Phosphorylated T ADRA2A 49583.5 1 2 5347.1 20.21 HUMAN 1 7.4307 2.1091 PGATLPKSPSQLRKG-p O00499;S331-p PGATLPKSPSQLRKG 0.38750448458777 0.0789167244059908 -0.136666666666667 -0.234 7.6134718270379 14.6386891572871 -0.136666666666667 -0.234 0.173241851798061 0.0343661660570264 -1.56802717624589 -2.80917850595967 O00499 BIN1 O00499.S331.p_BIN1 O00499_S331s _1_1_331_331 O00499 O00499|O00499-2|O00499-11|O00499-6 Myc box-dependent-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13598.13598.3 16.37 16.37 1.141 4 1 1 0 1017.1979 2969.6209 S331s TMT10 312 (R) VNHEPEPAGGATPGATLPKsPSQLR (K) VNHEPEPAGGAT(0.0)PGAT(0.0)LPKS(0.99)PS(0.0)QLR K:TMT10,s:Phosphorylated S BIN1 64926.4 6 2 2956.1 64.78 HUMAN 1 -7.6135 -14.6387 PGAVGERTPRKKEPP-p O60341;T59-p PGAVGERTPRKKEPP 0.885891325309933 0.0818819979822652 0.0293333333333333 -0.240333333333333 1.03382110530832 14.4060563822528 0.0293333333333333 -0.240333333333333 0.788166350592792 0.0362572083120938 0.282340711173651 -2.76606295608981 O60341 KDM1A O60341.T59.p_KDM1A O60341_T59t _1_1_59_59 O60341 O60341-2 Lysine-specific histone demethylase 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21680.21680.4 32.6 25 1.634 7 1 1 0 1267.1221 4985.4787 T59t TMT10 7 (K) AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERtPR (K) AAAAAAAAAAAAT(0.0)GT(0.0)EAGPGT(0.0)AGGS(0.0)ENGS(0.0)EVAAQPAGLS(0.0)GPAEVGPGAVGERT(0.99)PR t:Phosphorylated T KDM1A 93414.4 6 2 232.1 420.78 HUMAN 1 1.0338 -14.4061 PGAYKTATPPGYKPG-p P54259;T653-p PGAYKTATPPGYKPG 0.380643803112374 0.0371504551617536 -0.181666666666667 0.344 7.75264273653337 19.2242354819819 -0.181666666666667 0.344 0.167778275552425 0.0119557397214133 -1.59221919197567 3.71110336167913 P54259 ATN1 P54259.T653.p_ATN1 P54259_T653tS661s_2_2_653_661 P54259 P54259 Atrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16268.16268.4 10.72 10.72 2.429 5 2 2 0 570.2824 2118.1748 T653t S661s TMT10 651 (K) TAtPPGYKPGsPPSFR (T) T(0.0)AT(0.99)PPGY(0.0)KPGS(0.99)PPS(0.0)FR K:TMT10,t:Phosphorylated T,s:Phosphorylated S ATN1 125583.1 5 14 869.1 209.92 HUMAN 1 -7.7526 19.2242 PGCKAGLSPAEPLLS-p O95402;S361-p PGCKAGLSPAEPLLS 0.428778649561924 0.11180128661865 -0.118666666666667 -0.189666666666667 6.77264029357704 12.5593977844549 -0.118666666666667 -0.189666666666667 0.210249983623407 0.0554702625605536 -1.42115341735624 -2.43068761174731 O95402 MED26 O95402.S361.p_MED26 O95402_S361s _1_1_361_361 O95402 O95402|B8ZZF3 Mediator of RNA polymerase II transcription subunit 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20100.20100.2 12.94 12.94 1.678 2 1 1 0 760.4087 1439.8419 S361s TMT10 358 (K) AGLsPAEPLLSR (A) AGLS(0.99)PAEPLLS(0.0)R s:Phosphorylated S MED26 65901.7 2 5 901.1 203.59 HUMAN 1 -6.7726 -12.5594 PGDDDMDSPKETLPS-p Q9NYV4-2;S644-p PGDDDMDSPKETLPS 0.240662531361594 0.00490611822502891 -0.217 0.676666666666667 11.8234520884347 33.69643655204 -0.217 0.676666666666667 0.065713529077679 0.00042692967699594 -2.30105853288845 7.62643346837584 Q9NYV4 CDK12 Q9NYV4.2.S644.p_CDK12 Q9NYV4-2_S644s _1_1_644_644 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.35530.35530.5 18.61 17.12 1.379 6 1 1 0 768.6165 3759.0745 S644s TMT10 624 (K) TSTLPPLPLPPLLPGDDDMDsPKETLPSK (P) T(0.0)S(0.0)T(0.0)LPPLPLPPLLPGDDDMDS(0.99)PKET(0.0)LPS(0.0)K K:TMT10,s:Phosphorylated S CDK12 163853.1 13 23 59.1 708.76 HUMAN 1 -11.8235 33.6964 PGDQHPESPVHTEPM-p Q14676;S793-p PGDQHPESPVHTEPM 0.259441883712572 0.882523632291108 0.18 0.025 11.1165487523579 0.762562138648997 0.18 0.025 0.0773294862280772 0.838964889609463 2.17654036979617 0.21319080328904 Q14676 MDC1 Q14676.S793.p_MDC1 Q14676_S793s _1_1_793_793 Q14676 Q14676|Q14676-3 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11617.11617.4 21.22 21.22 6.887 2 1 1 0 666.3222 2582.2983 S793s TMT10 784 (R) AIPGDQHPEsPVHTEPMGIQGR (G) AIPGDQHPES(0.99)PVHT(0.0)EPMGIQGR s:Phosphorylated S MDC1 227803.2 7 21 6.1 1662.62 HUMAN 1 11.1165 0.7626 PGDRSAITPGGLRLG-p P34897;T420-p PGDRSAITPGGLRLG 0.842179784254459 0.0557863954490743 -0.0403333333333333 0.377666666666667 1.44234138207682 16.6999492338951 -0.0403333333333333 0.377666666666667 0.717407416050426 0.0213798708098766 -0.381428762155327 3.20138281046922 P34897 SHMT2 P34897.T420.p_SHMT2 P34897_T420t _1_1_420_420 P34897 P34897|P34897-2 Serine hydroxymethyltransferase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11679.11679.2 10.07 5.29 3.207 2 1 1 0 590.8185 1100.6625 T420t TMT10 417 (R) SAItPGGLR (L) S(0.0)AIT(0.99)PGGLR t:Phosphorylated T SHMT2 56448.4 1 5 2337.1 87.31 HUMAN 1 -1.4423 16.6999 PGDRSCPSPVRAGTA-p X6R3T8;S221-p PGDRSCPSPVRAGTA 0.307172848614777 0.0303052495993595 0.164333333333333 0.490666666666667 9.5832261411691 20.5337592470753 0.164333333333333 0.490666666666667 0.110072133881969 0.00884349786469302 1.90938446512627 3.99058676905708 X6R3T8 NotFound X6R3T8.S221.p_NotFound X6R3T8_S221s _1_1_221_221 X6R3T8 X6R3T8 SAP30-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4792.4792.2 8.12 5.44 3.268 2 1 1 0 556.2624 1031.5505 S221s TMT10 218 (R) SCPsPVR (A) S(0.0)CPS(0.99)PVR C:Carbamidomethylation,s:Phosphorylated S SAP30BP 26560.8 1 8 1421.2 144.21 HUMAN 1 9.5832 20.5338 PGDTQPNTPAPVPPA-p F5GWX5;T1546-p PGDTQPNTPAPVPPA 0.206446708127283 0.675617106743459 -0.225666666666667 0.055 13.2492689542937 2.32721242741166 -0.225666666666667 0.055 0.0473230910977454 0.585165559346826 -2.55608238473518 0.580033664618315 F5GWX5 CHD4 F5GWX5.T1546.p_CHD4 F5GWX5_T1546t _1_1_1546_1546 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23988.23988.4 20.26 14.26 3.001 8 1 1 0 1357.187 5345.7934 T1546t TMT10 1533 (K) TPTPSTPGDTQPNtPAPVPPAEDGIKIEENSLKEEESIEGEK (E) T(0.0)PT(0.0)PS(0.0)T(0.0)PGDT(0.0)QPNT(0.99)PAPVPPAEDGIKIEENS(0.0)LKEEES(0.0)IEGEK K:TMT10,t:Phosphorylated T CHD4 218583 7 22 49.1 753.68 HUMAN 1 -13.2493 2.3272 PGEAQEGSAKAERPG-p Q6P1M3;S680-p PGEAQEGSAKAERPG 0.850108893774089 0.307705458947907 -0.0293333333333333 -0.0983333333333333 1.36560856019118 6.7646099575546 -0.0293333333333333 -0.0989865783004961 0.730195486212898 0.210639106672526 -0.363229999828982 -1.41936419466564 Q6P1M3 LLGL2 Q6P1M3.S680.p_LLGL2 Q6P1M3_S680s _1_1_680_680 Q6P1M3 Q6P1M3|J3QRV5|Q6P1M3-2 Lethal(2) giant larvae protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12320.12320.5 18.63 18.63 99 1 1 1 0 707.1552 3451.7702 S680s Hydrogen 668 (R) HPAGPPGEAQEGsAKAERPGLQNMELAPVQR (K) HPAGPPGEAQEGS(1.0)AKAERPGLQNMELAPVQR K:TMT10-Lys-Only,s:Phosphorylated S LLGL2 114415.8 4 7 881.1 207.2 HUMAN 1 -1.3656 -6.7646 PGEARDYSPSRNPPE-p Q9HCM7;S1034-p PGEARDYSPSRNPPE 0.429365892463725 0.337971465516755 0.139666666666667 0.181333333333333 6.75969965778101 6.24174589745339 0.139666666666667 0.181333333333333 0.210877398000555 0.237588497045613 1.41888081167898 1.32718881188865 Q9HCM7 FBRSL1 Q9HCM7.S1034.p_FBRSL1 Q9HCM7_S1034s _1_1_1034_1034 Q9HCM7 Q9HCM7 Fibrosin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8252.8252.3 13.23 13.23 2.146 3 1 1 0 642.6372 1845.9293 S1034s TMT10 1032 (R) DYsPSRNPPEVEAR (-) DY(0.0)S(0.99)PS(0.0)RNPPEVEAR s:Phosphorylated S FBRSL1 111247 5 12 716.1 237.81 HUMAN 1 6.7597 6.2417 PGEDFPASPQRRNTA-p Q9Y6G9;S207-p PGEDFPASPQRRNTA 0.909891750490786 0.0121312290185198 0.0166666666666667 -0.394333333333333 0.804089019094008 26.7596642054839 0.0166666666666667 -0.394333333333333 0.830981007916525 0.00210879119440498 0.223987525644813 -5.49620309365329 Q9Y6G9 DYNC1LI1 Q9Y6G9.S207.p_DYNC1LI1 Q9Y6G9_S207s _1_1_207_207 Q9Y6G9 Q9Y6G9 Cytoplasmic dynein 1 light intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23445.24148.4 22.38 19.32 11.569 2 1 1 0 740.367 2878.4685 S207s TMT10 190 (K) LIRDFQEYVEPGEDFPAsPQRR (N) LIRDFQEY(0.0)VEPGEDFPAS(0.99)PQRR s:Phosphorylated S DYNC1LI1 56863.4 22 4 510.1 287.75 HUMAN 1 0.8041 -26.7597 PGEENAASEDRWSSR-p Q9UNK9;S105-p PGEENAASEDRWSSR 0.541253346273671 0.979305915994809 0.121666666666667 -0.00333333333333332 4.91749687189116 0.130761643068744 0.121666666666667 -0.00333333333333334 0.322292584269983 0.970339779180174 1.08891705825791 -0.0389295377920044 Q9UNK9 ANGEL1 Q9UNK9.S105.p_ANGEL1 Q9UNK9_S105s _1_1_105_105 Q9UNK9 Q9UNK9 Protein angel homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27640.27640.4 17.34 17.34 1.18 5 1 1 0 829.1425 3233.5694 S105s TMT10 85 (K) GLAQSSLALLMDNPGEENAAsEDRWSSR (Q) GLAQS(0.0)S(0.0)LALLMDNPGEENAAS(0.99)EDRWS(0.0)S(0.0)R s:Phosphorylated S ANGEL1 76643.6 4 2 4104.1 37.62 HUMAN 1 4.9175 -0.1308 PGELAARSPVLRGPQ-p A6NHQ4;S67-p PGELAARSPVLRGPQ 0.401141112391191 0.010242343797924 -0.154 -0.426333333333333 7.32365434259716 27.9353108169006 -0.154 -0.426333333333333 0.18519726373087 0.00160867724357593 -1.51755668074024 -5.81931907300553 A6NHQ4 C17orf96 A6NHQ4.S67.p_C17orf96 A6NHQ4_S67s _1_1_67_67 A6NHQ4 A6NHQ4 Elongin BC and Polycomb repressive complex 2-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16972.16972.3 13.27 13.27 7.131 3 1 1 0 715.386 2064.1763 S67s TMT10 53 (R) ASSLGPGPGELAARsPVLR (G) AS(0.0)S(0.0)LGPGPGELAARS(0.99)PVLR s:Phosphorylated S EPOP 39948.7 1 2 4700.1 27.77 HUMAN 1 -7.3237 -27.9353 PGELADISDVEGEVG-p P54725-3;S294-p PGELADISDVEGEVG 0.101898773560751 0.170383338403369 -0.331666666666667 0.166333333333333 20.9800133930201 10.105323583523 -0.331666666666667 0.166333333333333 0.00797992226370396 0.097604005706537 -4.09250015338384 1.99919678451448 P54725 RAD23A P54725.3.S294.p_RAD23A P54725-3_S294s_1_1_294_294 P54725-3 P54725|P54725-3 Isoform 3 of UV excision repair protein RAD23 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.33676.33676.5 19.58 11.17 2.41 3 1 1 0 1136.7469 5566.7398 M282m N284n S294s M310m TMT10 275 (R) HQEQFIQmLnEPPGELADIsDVEGEVGAIGEEAPQmNYIQVTPQEK (E) HQEQFIQM(1.0)LN(0.99)EPPGELADIS(0.99)DVEGEVGAIGEEAPQM(1.0)N(0.0)Y(0.0)IQVT(0.0)PQEK K:TMT10,m:Oxidized methionine,n:Deamidated,s:Phosphorylated S RAD23A 39594.5 22 5 1987.1 103.93 HUMAN 1 -20.98 10.1053 PGEMRDQSPKGRESR-p A0A0G2JHC2;S133-p PGEMRDQSPKGRESR 0.757874845532599 0.191665078422291 -0.0526666666666667 0.130666666666667 2.30443732368676 9.43434087084379 -0.0526666666666667 0.130666666666667 0.588242322475015 0.113911065169118 -0.575214040508843 1.88286677842458 A0A0G2JHC2 NotFound A0A0G2JHC2.S133.p_NotFound A0A0G2JHC2_S133s _1_1_133_133 A0A0G2JHC2 Q6NYC8|A0A0G2JHC2|Q6NYC8-2 PPP1R18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3576.3576.4 13.44 11.81 4.142 2 1 1 0 502.5001 1927.0129 S133s Hydrogen 123 (R) RPSPGEMRDQsPKGR (E) RPS(0.0)PGEMRDQS(0.99)PKGR K:TMT10-Lys-Only,s:Phosphorylated S PPP1R18 68325.8 7 3 1213.1 166.15 HUMAN 1 -2.3044 9.4343 PGENGDDS_______-p Q6IBS0;S349-p PGENGDDS_______ 0.143638422086766 0.880966898310311 0.259333333333333 0.0153333333333333 17.2127410412652 0.773462940659402 0.259333333333333 0.0153333333333333 0.0189987879659089 0.836861726282041 3.30465411916101 0.216026395213013 Q6IBS0 TWF2 Q6IBS0.S349.p_TWF2 Q6IBS0_S349s_1_1_349_349 Q6IBS0 Q6IBS0 Twinfilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8036.8560.3 13.57 13.57 99 1 1 1 0 565.9353 1614.8397 N345n S349s TMT10 337 (K) RLIRGPGEnGDDs (-) RLIRGPGEN(1.0)GDDS(1.0) n:Deamidated,s:Phosphorylated S TWF2 39775.5 7 1 4919.1 25.06 HUMAN 1 17.2127 0.7735 PGENQPLSPEASRKA-p O14841;S419-p PGENQPLSPEASRKA 0.908684020919764 0.870006215796507 0.02 0.0196666666666667 0.817742919548199 0.852273044153167 0.02 0.0196666666666667 0.828372567006915 0.821812410810523 0.227514856417765 0.236377976525761 O14841 OPLAH O14841.S419.p_OPLAH O14841_S419s _1_1_419_419 O14841 O14841 5-oxoprolinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.32397.32397.4 15.62 15.62 2.677 3 1 1 0 813.4205 3170.7073 S419s TMT10 401 (R) LLPASFPCIFGPGENQPLsPEASRK (A) LLPAS(0.0)FPCIFGPGENQPLS(0.99)PEAS(0.0)RK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S OPLAH 138824 5 2 1942.1 106.03 HUMAN 1 0.8177 0.8523 PGEPMHASPPRKARV-p Q8TDM6;S1064-p PGEPMHASPPRKARV 0.957435127352516 0.441060828902379 0.014 0.155 0.36816956176909 4.7338286267936 0.014 0.155 0.918719731354434 0.336215040284859 0.106900126054834 1.05484339348114 Q8TDM6 DLG5 Q8TDM6.S1064.p_DLG5 Q8TDM6_S1064s _1_1_1064_1064 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21225.21225.4 22.56 22.39 4.983 12 1 1 0 1170.8341 4600.3129 S1064s TMT10 1028 (R) LETSSESEATLVGSSPSTSPPSALPPDVDPGEPMHAsPPRK (A) LET(0.0)S(0.0)S(0.0)ES(0.0)EAT(0.0)LVGS(0.0)S(0.0)PS(0.0)T(0.0)S(0.0)PPS(0.0)ALPPDVDPGEPMHAS(0.99)PPRK K:TMT10,s:Phosphorylated S DLG5 215575.4 1 25 34.1 890.58 HUMAN 1 0.3682 4.7338 PGEPPPCSPRSLEEP-p A0A075B747;S1141-p PGEPPPCSPRSLEEP 0.29414909149722 0.487166220682005 0.226666666666667 -0.07 10.0282685798436 4.17263615393036 0.226666666666667 -0.07 0.0993512057125057 0.382592440404932 1.9866221110889 -0.949822614640929 A0A075B747 BAHCC1 A0A075B747.S1141.p_BAHCC1 A0A075B747_S1141s _1_1_1141_1141 A0A075B747 A0A075B747|Q9P281|F8WBW8 BAH and coiled-coil domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18912.18912.3 10.23 10.23 10.23 2 1 1 0 588.6176 1683.8726 S1141s TMT10 1131 (R) TFLPGEPPPCsPR (S) T(0.0)FLPGEPPPCS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S BAHCC1 282806.7 2 1 75.2 647.68 HUMAN 1 10.0283 -4.1726 PGEPSPPSPPCRRPG-p Q5QP82-2;S92-p PGEPSPPSPPCRRPG 0.191102046396083 0.878808270645587 0.267666666666667 -0.0166666666666667 14.0398510537679 0.787924419264448 0.267666666666667 -0.0166666666666666 0.0394470830669088 0.834079712861262 2.7002381478974 -0.219780388132644 Q5QP82 DCAF10 Q5QP82.2.S92.p_DCAF10 Q5QP82-2_S92s _1_1_92_92 Q5QP82-2 Q5QP82|Q5QP82-2 Isoform 2 of DDB1- and CUL4-associated factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14805.14835.5 18.61 18.61 1.13 7 1 1 0 788.1722 3856.8544 S92s TMT10 68 (R) SGELGLPGAPESSTASAPGEPSPPsPPCRRPGPDCR (A) S(0.0)GELGLPGAPES(0.0)S(0.0)T(0.0)AS(0.0)APGEPS(0.0)PPS(0.99)PPCRRPGPDCR C:Carbamidomethylation,s:Phosphorylated S DCAF10 57709 6 2 2092.1 97.98 HUMAN 1 14.0399 -0.7879 PGERRSRSPRKPIDS-p Q9UQ35;S2677-p PGERRSRSPRKPIDS 0.30573507454244 0.101609362025616 0.156333333333333 0.234333333333333 9.64677571506062 13.1193500070768 0.156333333333333 0.234333333333333 0.108473194080078 0.0487601462198752 1.92040323940612 2.53119152350095 Q9UQ35 SRRM2 Q9UQ35.S2677.p_SRRM2 Q9UQ35_S2677s _1_1_2677_2677 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5611.5611.4 11.1 11.1 6.046 3 1 1 0 459.7479 1756.0027 S2677s Hydrogen 2677 (R) sPRKPIDSLRDSR (S) S(0.99)PRKPIDS(0.0)LRDS(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 24 163 2.1 3310.34 HUMAN 1 9.6468 13.1194 PGETPPLSPIDMESQ-p P05412;S243-p PGETPPLSPIDMESQ 0.270871529957664 0.345294206674116 -0.187333333333333 -0.0896666666666666 10.7519549574533 6.12020850752989 -0.187333333333333 -0.0896666666666666 0.0841016476567224 0.244331324486245 -2.11270847492126 -1.30563310772815 P05412 JUN P05412.S243.p_JUN P05412_S243s _1_1_243_243 P05412 P05412 Transcription factor AP-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26865.26865.5 26.51 24.83 2.393 4 1 1 0 803.8041 3935.0182 S243s TMT10 222 (R) LQALKEEPQTVPEMPGETPPLsPIDMESQER (I) LQALKEEPQT(0.0)VPEMPGET(0.0)PPLS(0.99)PIDMES(0.0)QER K:TMT10,s:Phosphorylated S JUN 35846.1 14 2 1749.2 117.66 HUMAN 1 -10.752 -6.1202 PGEVPSDSDEDGEHK-p Q96T58;S1382-p PGEVPSDSDEDGEHK 0.62773843923883 0.23444264087742 0.170333333333333 0.251333333333333 3.75726986148804 8.29513158443299 0.170333333333333 0.251333333333333 0.420991196122346 0.148076738965276 0.870437540588849 1.68576791590687 Q96T58 SPEN Q96T58.S1382.p_SPEN Q96T58_S1380sS1382s_2_2_1380_1382 Q96T58 Q96T58 Msx2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.10191.10460.3 7.72 7.72 99 2 2 2 0 781.9769 2183.9778 S1380s S1382s Hydrogen 1372 (R) DLEPGEVPsDsDEDGEHK (S) DLEPGEVPS(1.0)DS(1.0)DEDGEHK K:TMT10-Lys-Only,s:Phosphorylated S SPEN 403267.9 1 9 2199.1 93.72 HUMAN 1 3.7573 8.2951 PGFKHAGSEGELYPP-p Q9H7P9;S505-p PGFKHAGSEGELYPP 0.25414491835742 0.297153394373542 -0.171666666666667 -0.103333333333333 11.3247753020366 6.95673985869304 -0.171666666666667 -0.103333333333333 0.0737093310540696 0.201523647039462 -2.21310809635352 -1.45303965342897 Q9H7P9 PLEKHG2 Q9H7P9.S505.p_PLEKHG2 Q9H7P9_S505s_1_1_505_505 Q9H7P9 Q9H7P9|Q9H7P9-3|E7ESZ3|Q9H7P9-2 Pleckstrin homology domain-containing family G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36975.36975.5 13.25 13.25 6.75 10 1 1 0 1147.5468 5652.7554 S505s N551n TMT10 502 (K) HAGsEGELYPPESQPPVSGSAPPEDLEDAGPPTLDPSGTSITEEILELLnQR (G) HAGS(0.99)EGELY(0.0)PPES(0.0)QPPVS(0.0)GS(0.0)APPEDLEDAGPPT(0.0)LDPS(0.0)GT(0.0)S(0.0)IT(0.0)EEILELLN(1.0)QR s:Phosphorylated S,n:Deamidated PLEKHG2 149335.7 2 8 886.1 206.23 HUMAN 1 -11.3248 -6.9567 PGFRRQASLSQSIRK-p Q6PJF5;S113-p PGFRRQASLSQSIRK 0.0506176118125653 0.67450844612287 -0.543333333333333 -0.055 28.5201343218813 2.33747613366585 -0.543333333333333 -0.055 0.0014060040375014 0.583784267094649 -5.99420519208828 -0.58223416886133 Q6PJF5 RHBDF2 Q6PJF5.S113.p_RHBDF2 Q6PJF5_S113s _1_1_113_113 Q6PJF5 Q6PJF5|Q6PJF5-2 Inactive rhomboid protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10631.10631.3 9.65 9.65 9.654 3 1 1 0 552.6466 1575.9583 S113s TMT10 111 (R) QAsLSQSIRK (G) QAS(0.99)LS(0.0)QS(0.0)IRK K:TMT10,s:Phosphorylated S RHBDF2 98224.8 3 2 1595.1 129.07 HUMAN 1 -28.5201 -2.3375 PGFRRRESQEEPRAV-p Q9H6S3;S240-p PGFRRRESQEEPRAV 0.506134532757588 0.660622876956876 -0.176666666666667 0.301666666666667 5.45836451797669 2.46409188444391 -0.176666666666667 0.301666666666667 0.284553248672094 0.56701012170122 -1.18743216260218 0.609213743209027 Q9H6S3 EPS8L2 Q9H6S3.S240.p_EPS8L2 Q9H6S3_S240s _1_1_240_240 Q9H6S3 Q9H6S3-3 Epidermal growth factor receptor kinase substrate 8-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12113.12113.5 7.9 6.75 99 1 1 1 0 587.7367 2854.683 S240s TMT10 237 (R) RREsQEEPRAVLAQKIEK (E) RRES(1.0)QEEPRAVLAQKIEK K:TMT10,s:Phosphorylated S EPS8L2 81246.7 1 5 559.1 272.21 HUMAN 1 -5.4584 2.4641 PGFSKVDSPVLW___-p Q9BZF3;S930-p PGFSKVDSPVLW___ 0.472226540382335 0.161261365306528 -0.103 -0.146666666666667 6.01064803783202 10.4216443341699 -0.103 -0.146666666666667 0.250573532876799 0.0907476874474538 -1.28646023616544 -2.05419877928632 Q9BZF3 OSBPL6 Q9BZF3.S930.p_OSBPL6 Q9BZF3_S930s _1_1_930_930 Q9BZF3 Q9BZF3-5|Q9BZF3-3|Q9BZF3-4|Q9BZF3-2 Oxysterol-binding protein-related protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28159.28159.3 10.68 10.68 4.672 2 1 1 0 662.3462 1905.0522 S930s TMT10 922 (K) DPGFSKVDsPVLW (-) DPGFS(0.0)KVDS(0.99)PVLW K:TMT10,s:Phosphorylated S OSBPL6 107445.2 1 6 1916.1 107.26 HUMAN 1 -6.0106 -10.4216 PGGCGKKSPFGGLGT-p O15417;S611-p PGGCGKKSPFGGLGT 0.455652494519437 0.438110715452225 -0.154 0.121333333333333 6.29686707118849 4.77532145446117 -0.154 0.121333333333333 0.234592051345765 0.333018112186728 -1.33728044571613 1.06251237537122 O15417 TNRC18 O15417.S611.p_TNRC18 O15417_S611s _1_1_611_611 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16253.16253.5 12.49 7.86 1.444 5 1 1 0 882.4742 4328.3777 S611s TMT10 598 (R) DAVAVRPGGCGKKsPFGGLGTMKPEPAPTSAGASR (A) DAVAVRPGGCGKKS(0.99)PFGGLGT(0.0)MKPEPAPT(0.0)S(0.0)AGAS(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNRC18 316168 4 6 75.1 647.68 HUMAN 1 -6.2969 4.7753 PGGGNRSSSVPHPFQ-p Q5VV41;S577-p PGGGNRSSSVPHPFQ 0.154754532748189 0.963730966508974 -0.327 0.00633333333333334 16.2774437503821 0.22875291024899 -0.327 0.00633333333333333 0.0235643586975861 0.948690843639073 -3.12164526528109 0.0673843248834676 Q5VV41 ARHGEF16 Q5VV41.S577.p_ARHGEF16 Q5VV41_S577s _1_1_577_577 Q5VV41 Q5VV41|Q5VV41-2 Rho guanine nucleotide exchange factor 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22295.22295.2 13.02 9.66 1.142 4 1 1 0 938.9992 1797.022 S577s TMT10 576 (R) SsSVPHPFQVTLLR (N) S(0.0)S(0.99)S(0.0)VPHPFQVT(0.0)LLR s:Phosphorylated S ARHGEF16 80388.8 8 11 597.1 263.65 HUMAN 1 -16.2774 0.2288 PGGGPGGSHMGGNYG-p P35637;S462-p PGGGPGGSHMGGNYG 0.150656486017123 0.276111998074727 0.327 -0.165333333333333 16.5638281496334 7.36508699573048 0.327 -0.165333333333333 0.0220605931380766 0.18343884211848 3.17721384001903 -1.52433708511117 P35637 FUS P35637.S462.p_FUS P35637_S462s _1_1_462_462 P35637 H3BPE7|P35637|P35637-2 RNA-binding protein FUS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7604.7604.4 17.55 17.55 5.17 2 1 1 0 698.5726 2711.2996 S462s TMT10 449 (K) APKPDGPGGGPGGsHMGGNYGDDR (R) APKPDGPGGGPGGS(0.99)HMGGNY(0.0)GDDR K:TMT10,s:Phosphorylated S FUS 53653.1 3 3 3015.1 63.2 HUMAN 1 16.5638 -7.3651 PGGLALVSPYHTHRA-p Q9BV19;S43-p PGGLALVSPYHTHRA 0.944171238796566 0.811297337793882 -0.0286666666666667 0.0476666666666667 0.492161460992435 1.27300953980526 -0.0286666666666667 0.0476666666666667 0.892861000869289 0.745931669394492 -0.141145187963797 0.340989430347055 Q9BV19 C1orf50 Q9BV19.S43.p_C1orf50 Q9BV19_S43s _1_1_43_43 Q9BV19 Q9BV19 Uncharacterized protein C1orf50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23877.23877.4 14.99 14.99 1.178 5 1 1 0 883.2091 3449.8491 S43s TMT10 17 (R) QGAPPAAGQGGALVELTPTPGGLALVsPYHTHR (A) QGAPPAAGQGGALVELT(0.0)PT(0.0)PGGLALVS(0.99)PY(0.0)HT(0.0)HR s:Phosphorylated S C1orf50 22047.4 1 1 5964.1 14.99 HUMAN 1 -0.4922 1.273 PGGNIYISPLKSPYK-p P06400;S807-p PGGNIYISPLKSPYK 0.082813649542649 0.00224524277340684 -0.439333333333333 -0.971 23.1254582934161 41.0934906389231 -0.439333333333334 -0.971 0.0048691614016213 7.77411455938446e-05 -4.58414843973803 -10.6343030595679 P06400 RB1 P06400.S807.p_RB1 P06400_S807s _1_1_807_807 P06400 P06400 Retinoblastoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25138.25138.4 17.86 17.86 2.054 4 1 1 0 629.3641 2434.4677 S807s TMT10 799 (R) IPGGNIYIsPLKSPYK (I) IPGGNIY(0.0)IS(0.99)PLKS(0.0)PY(0.0)K K:TMT10,s:Phosphorylated S RB1 107013.3 17 9 155.1 502.88 HUMAN 1 -23.1255 -41.0935 PGGSGSGSPRGRGRL-p Q86SI9-2;S148-p PGGSGSGSPRGRGRL 0.0419759346590392 0.443361105923466 0.499 -0.159666666666667 30.7294417852427 4.70342037080469 0.499 -0.159666666666667 0.00084538749895868 0.338577397881543 6.65716462059777 -1.04921536206529 Q86SI9 C5orf38 Q86SI9.2.S148.p_C5orf38 Q86SI9-2_S148s _1_1_148_148 Q86SI9-2 Q86SI9-2 Isoform 2 of Protein CEI HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3871.3871.2 12.16 8.15 1.113 4 1 1 0 727.3352 1373.6971 S148s TMT10 137 (R) GTAGPGGSGSGsPR (G) GT(0.0)AGPGGS(0.0)GS(0.0)GS(0.99)PR s:Phosphorylated S C5orf38 24546.6 1 1 5191.1 22.01 HUMAN 1 30.7294 -4.7034 PGGSQAPSPIANTFL-p A0A0A0MRX4;S52-p PGGSQAPSPIANTFL 0.42972822039635 0.0529355983987602 0.148 -0.284 6.75382917836006 17.022780022611 0.148 -0.284 0.211162639591399 0.0198482397743099 1.41784970527327 -3.26463108814074 A0A0A0MRX4 RGL3 A0A0A0MRX4.S52.p_RGL3 A0A0A0MRX4_S52s _1_1_52_52 A0A0A0MRX4 Q3MIN7-2|A0A0A0MRX4|H3BQS8 Ral guanine nucleotide dissociation stimulator-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18139.18139.3 17 14.11 5.772 5 1 1 0 940.4684 2739.4164 S52s TMT10 39 (R) RSPAEGPGGSQAPsPIANTFLHYR (T) RS(0.0)PAEGPGGS(0.0)QAPS(0.99)PIANT(0.0)FLHY(0.0)R s:Phosphorylated S RGL3 78574.5 2 1 1395.1 146.85 HUMAN 1 6.7538 -17.0228 PGGTDSVSPPPSVIT-p Q9C0C9;S322-p PGGTDSVSPPPSVIT 0.247048592039774 0.402313360429724 0.207 0.088 11.6100304619177 5.26019706997123 0.207 0.088 0.0690234962435343 0.297838127624302 2.26334965493369 1.15129084588379 Q9C0C9 UBE2O Q9C0C9.S322.p_UBE2O Q9C0C9_S322s _1_1_322_322 Q9C0C9 Q9C0C9 (E3-independent) E2 ubiquitin-conjugating enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21650.21650.3 15.88 15.88 1.277 6 1 1 0 937.7816 2731.3559 S322s TMT10 312 (K) SFCPGGTDSVsPPPSVITQENLGR (V) S(0.0)FCPGGT(0.0)DS(0.0)VS(0.99)PPPS(0.0)VIT(0.0)QENLGR C:Carbamidomethylation,s:Phosphorylated S UBE2O 142717.3 1 3 308.1 373.27 HUMAN 1 11.61 5.2602 PGHGDRLSPGERRSL-p Q9H9J4;S1007-p PGHGDRLSPGERRSL 0.340727355898959 0.12504680267232 -0.575333333333333 -0.869 8.69426610475524 11.9073203003004 -0.575333333333333 -0.869 0.135074506506918 0.0644566855840591 -1.755439787561 -2.31476203764966 Q9H9J4 USP42 Q9H9J4.S1007.p_USP42 Q9H9J4_S1007s _1_1_1007_1007 Q9H9J4 Q9H9J4|Q9H9J4-2 Ubiquitin carboxyl-terminal hydrolase 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3418.3418.5 13.01 13.01 99 1 1 1 0 459.8201 2215.1067 S1007s TMT10 994 (R) HAPEHHPGHGDRLsPGER (R) HAPEHHPGHGDRLS(1.0)PGER s:Phosphorylated S USP42 146872.9 2 7 255.1 399.37 HUMAN 1 -8.6943 -11.9073 PGHKRTLSDPPSPLP-p Q9ULH1-2;S842-p PGHKRTLSDPPSPLP 0.952442048084725 0.455648233911075 -0.0123333333333333 -0.083 0.418232074306209 4.55192583674529 -0.0123333333333333 -0.0829999999999999 0.908190160929952 0.350596370917719 -0.120824022195724 -1.02107527489237 Q9ULH1 ASAP1 Q9ULH1.2.S842.p_ASAP1 Q9ULH1-2_S842s _1_1_842_842 Q9ULH1-2 Q9ULH1-2|A0A0A0MRE5 Isoform 1 of Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13760.13760.3 14.23 14.23 2.164 3 1 1 0 655.0014 1883.0224 S842s Hydrogen 840 (R) TLsDPPSPLPHGPPNK (G) T(0.0)LS(0.99)DPPS(0.0)PLPHGPPNK K:TMT10-Lys-Only,s:Phosphorylated S ASAP1 126865.1 7 5 801.1 222.95 HUMAN 1 -0.4182 -4.5519 PGHKRTPSEAERWLE-p Q9Y6R0;S411-p PGHKRTPSEAERWLE 0.0995388440058061 0.00385203903768179 -0.326 -0.698333333333333 21.2006448034376 35.7216389497801 -0.326 -0.698333333333333 0.0075846495625573 0.000267815744531736 -4.14149155084046 -8.36370506807286 Q9Y6R0 NUMBL Q9Y6R0.S411.p_NUMBL Q9Y6R0_S411s _1_1_411_411 Q9Y6R0 Q9Y6R0|A0A0C4DGH3 Numb-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.33617.33617.4 14.71 13.69 1.165 3 1 1 0 625.0751 2417.3077 S411s TMT10 409 (R) TPsEAERWLEEVSQVAK (A) T(0.0)PS(0.99)EAERWLEEVS(0.0)QVAK K:TMT10,s:Phosphorylated S NUMBL 65632 5 20 538.2 277.23 HUMAN 1 -21.2006 -35.7216 PGHLCPDSPESSRLS-p Q69YU3;S351-p PGHLCPDSPESSRLS 0.377007280567508 0.319313457105341 -0.125333333333333 0.107 7.82880507793869 6.55678459805494 -0.125333333333333 0.107 0.164861593091963 0.22096400868732 -1.60544816495099 1.38282701324795 Q69YU3 ANKRD34A Q69YU3.S351.p_ANKRD34A Q69YU3_S351s _1_1_351_351 Q69YU3 Q69YU3 Ankyrin repeat domain-containing protein 34A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18709.18709.3 13.82 13.82 3.263 4 1 1 0 888.0627 2582.2064 S351s TMT10 336 (R) MEPVELDTPGHLCPDsPESSR (L) MEPVELDT(0.0)PGHLCPDS(0.99)PES(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S ANKRD34A 52919.9 1 6 922.1 199.97 HUMAN 1 -7.8288 6.5568 PGIIPRISVREPMQT-p P25705;S184-p PGIIPRISVREPMQT 0.671622580526137 0.00801372429763006 0.0606666666666667 0.443333333333333 3.23778097014427 29.8722400876806 0.0606666666666667 0.443333333333333 0.47448436135872 0.00102985478509641 0.768308018407595 6.38328509119808 P25705 ATP5A1 P25705.S184.p_ATP5A1 P25705_S184s _1_1_184_184 P25705 P25705|P25705-3|P25705-2 ATP synthase subunit alpha, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17379.17379.3 13.69 13.69 5.408 2 1 1 0 633.0184 1817.0719 S184s TMT10 183 (R) IsVREPMQTGIK (A) IS(0.99)VREPMQT(0.0)GIK K:TMT10,s:Phosphorylated S ATP5A1 59863.7 2 5 1547.1 132.65 HUMAN 1 3.2378 29.8722 PGIKVGGSGVNVNAK-p Q09666;S256-p PGIKVGGSGVNVNAK 0.285207992770294 0.702428495394349 0.172333333333333 -0.0406666666666666 10.2852039838163 2.10819585687831 0.172333333333333 -0.0406666666666666 0.0936439235238069 0.615432482148122 2.03130662339364 -0.532568584715678 Q09666 AHNAK Q09666.S256.p_AHNAK Q09666_S256s _1_1_256_256 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12185.12185.2 14.47 14.47 99 1 1 1 0 770.4205 1459.8633 S256s TMT10 253 (K) VGGsGVNVNAK (G) VGGS(1.0)GVNVNAK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 12 1.1 4313.36 HUMAN 1 10.2852 -2.1082 PGIPKDNSPLREKFG-p Q5VUA4;S464-p PGIPKDNSPLREKFG 0.432234545075026 0.318760903714592 -0.119 0.109666666666667 6.70766097678887 6.56561243118937 -0.119 0.109666666666667 0.213419403789125 0.220515314929779 -1.40973738569037 1.38438153602712 Q5VUA4 ZNF318 Q5VUA4.S464.p_ZNF318 Q5VUA4_S464s _1_1_464_464 Q5VUA4 Q5VUA4|Q5VUA4-2 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26631.26631.5 20.49 20.49 11.409 4 1 1 0 952.9192 4680.5993 S464s TMT10 436 (K) GTMVETALKEPQGNLYQWGPLPGIPKDNsPLREK (F) GT(0.0)MVET(0.0)ALKEPQGNLY(0.0)QWGPLPGIPKDNS(0.99)PLREK K:TMT10,s:Phosphorylated S ZNF318 252762.4 3 11 37.1 870.88 HUMAN 1 -6.7077 6.5656 PGIRDHESL______-p P51858;S239-p PGIRDHESL______ 0.766667060694937 0.0630875961528441 0.0616666666666666 0.307666666666667 2.21150256975657 15.9766179302337 0.0616666666666666 0.307666666666667 0.600965779687482 0.0252544669938078 0.555147549064706 3.0615426117341 P51858 HDGF P51858.S239.p_HDGF P51858_S239s _1_1_239_239 P51858 P51858-3 Hepatoma-derived growth factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13544.13549.5 24.57 24.57 5.117 6 1 1 0 1047.0635 5151.3311 S239s TMT10 198 (K) NSTPSEPGSGRGPPQEEEEEEDEEEEATKEDAEAPGIRDHEsL (-) NS(0.0)T(0.0)PS(0.0)EPGS(0.0)GRGPPQEEEEEEDEEEEAT(0.0)KEDAEAPGIRDHES(0.99)L K:TMT10,s:Phosphorylated S HDGF 26901.9 4 8 213.1 437.7 HUMAN 1 2.2115 15.9766 PGKAEAESDALPDDT-p Q9GZR7-2;S240-p PGKAEAESDALPDDT 0.690267384054256 0.790019506450454 0.0603333333333333 -0.0296666666666667 3.01747779157304 1.42356407794503 0.0603333333333333 -0.0296666666666667 0.499174303739968 0.720515938402002 0.723960004372172 -0.376952266775539 Q9GZR7 DDX24 Q9GZR7.2.S240.p_DDX24 Q9GZR7-2_S240s _1_1_240_240 Q9GZR7-2 Q9GZR7|G3V529|Q9GZR7-2|F5GYL3|A0A1W2PRR2 Isoform 2 of ATP-dependent RNA helicase DDX24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25281.25281.4 28.15 23.19 2.101 5 1 1 0 948.9693 3712.8805 S240s TMT10 232 (R) SPGKAEAEsDALPDDTVIESEALPSDIAAEAR (A) S(0.0)PGKAEAES(0.99)DALPDDT(0.0)VIES(0.0)EALPS(0.0)DIAAEAR K:TMT10,s:Phosphorylated S DDX24 90923.6 9 6 432.1 315.56 HUMAN 1 3.0175 -1.4236 PGKAKPASPARRLDL-p E9PGC8;S2855-p PGKAKPASPARRLDL 0.0332552830156115 0.166187030082296 0.601333333333333 0.202666666666667 34.4878773163179 10.2500591939158 0.601333333333333 0.202666666666667 0.000355805181544744 0.0944048008915621 7.92263757465025 2.02434792633303 E9PGC8 NotFound E9PGC8.S2855.p_NotFound E9PGC8_S2855s _1_1_2855_2855 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.3885.3885.3 7.52 7.52 99 1 1 1 0 445.923 1255.7887 S2855s TMT10 2851 (K) AKPAsPAR (R) AKPAS(1.0)PAR K:TMT10,s:Phosphorylated S MAP1A 332906.7 3 41 20.1 1016.98 HUMAN 1 34.4879 10.2501 PGKALVATPGKKGAA-p P19338;T121-p PGKALVATPGKKGAA 0.390513422575628 0.00274191631715344 -0.128 -0.769333333333333 7.54743309877933 38.8256481435973 -0.128 -0.769333333333334 0.175896294332047 0.000131049444882148 -1.55653837279487 -9.6154973962203 P19338 NCL P19338.T121.p_NCL P19338_T121t _1_1_121_121 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11882.11882.3 11.78 7.55 99 1 1 1 0 551.3427 1572.0452 T121t TMT10 117 (K) ALVAtPGKK (G) ALVAT(1.0)PGKK K:TMT10,t:Phosphorylated T NCL 76670.1 9 6 114.1 570.88 HUMAN 1 -7.5474 -38.8256 PGKDVRNSDMHLLDL-p Q9Y3P9;S360-p PGKDVRNSDMHLLDL 0.0179608585572389 0.050124945718593 -0.849666666666667 -0.254333333333333 41.0115695727372 17.374035036229 -0.849666666666667 -0.254333333333333 7.92214966322953e-05 0.018306128070356 -10.621208690005 -3.33406046352511 Q9Y3P9 RABGAP1 Q9Y3P9.S360.p_RABGAP1 Q9Y3P9_S360s _1_1_360_360 Q9Y3P9 Q9Y3P9|Q9Y3P9-2|Q9Y3P9-3 Rab GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29944.29944.5 21.51 17.68 1.599 3 1 1 0 760.7969 3719.989 S360s TMT10 346 (R) CFGLLLSPGKDVRNsDMHLLDLESMGK (S) CFGLLLS(0.0)PGKDVRNS(0.99)DMHLLDLES(0.0)MGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RABGAP1 122989.9 9 8 520.1 284.17 HUMAN 1 -41.0116 -17.374 PGKETRCSPPSFTYK-p P28290;S767-p PGKETRCSPPSFTYK 0.886118944763575 0.145972593594168 0.0223333333333333 0.152333333333333 1.02766344148925 11.0088714179106 0.0223333333333333 0.152333333333333 0.789284648397662 0.0792707301098797 0.280803187953814 2.15669039475253 P28290 SSFA2 P28290.S767.p_SSFA2 P28290_S767s _1_1_767_767 P28290 P28290|P28290-3|E9PHV5|P28290-2|E7EUL7 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13386.13587.3 13.07 8.25 2.541 5 1 1 0 670.9977 1931.0097 S767s TMT10 763 (K) ETRCsPPSFTYK (Y) ET(0.0)RCS(0.99)PPS(0.0)FT(0.0)Y(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SSFA2 139638.7 8 21 73.1 652.35 HUMAN 1 1.0277 11.0089 PGKLLTRSLALGGKK-p A0A087WZR9;S311-p PGKLLTRSLALGGKK 0.250626639088027 0.334136370854553 0.248666666666667 0.218 11.4696063103358 6.30960135288281 0.248666666666667 0.218 0.0712917653464446 0.233905193480563 2.2385949816339 1.33920048697205 A0A087WZR9 NotFound A0A087WZR9.S311.p_NotFound A0A087WZR9_S311s _1_1_311_311 A0A087WZR9 Q96C36|A0A087WZR9|A0A087WTV6 Pyrroline-5-carboxylate reductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10078.10078.2 7.36 7.36 99 1 1 1 0 713.91 1346.8408 S311s Hydrogen 311 (R) sLALGGKKD (-) S(1.0)LALGGKKD K:TMT10-Lys-Only,s:Phosphorylated S PYCR2 34093.4 2 2 3345.1 53.25 HUMAN 1 11.4696 6.3096 PGKPRANSLVTLGSH-p O15018;S920-p PGKPRANSLVTLGSH 0.72370254925658 0.655942519680533 -0.0646666666666667 0.0436666666666667 2.65812567075906 2.50319042315219 -0.0646666666666667 0.0436666666666667 0.54223485776939 0.561928368539006 -0.650075214541074 0.617484333333227 O15018 PDZD2 O15018.S920.p_PDZD2 O15018_S920s _1_1_920_920 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11830.11830.3 15.17 15.17 3.35 3 1 1 0 488.5906 1383.7906 S920s TMT10 918 (R) ANsLVTLGSHR (A) ANS(0.99)LVT(0.0)LGS(0.0)HR s:Phosphorylated S PDZD2 304146 2 8 85.1 628.64 HUMAN 1 -2.6581 2.5032 PGKRRTQSLSALPKE-p I3L2J0;S1082-p PGKRRTQSLSALPKE 0.032689595756867 0.00267369065398195 -0.913666666666667 -0.880666666666667 34.7730091713376 39.0908477906378 -0.913666666666667 -0.880666666666667 0.000333195465853537 0.000123286414108452 -8.02645051122626 -9.72986113910204 I3L2J0 NotFound I3L2J0.S1082.p_NotFound I3L2J0_S1082s _1_1_1082_1082 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16711.16711.2 12.18 8.31 2.19 3 1 1 0 741.9213 1402.867 S1082s TMT10 1080 (R) TQsLSALPK (E) T(0.0)QS(0.99)LS(0.0)ALPK K:TMT10,s:Phosphorylated S CIC 259056.7 9 20 23.1 999.57 HUMAN 1 -34.773 -39.0908 PGKTRGGSPYNQFDI-p Q9UPQ9;S1432-p PGKTRGGSPYNQFDI 0.544047599257806 0.0161377331038498 0.0886666666666667 0.341666666666667 4.8811956745243 24.7454779990081 0.0886666666666666 0.341666666666667 0.324997808544651 0.00335314396597375 1.08224095030279 4.97347636645093 Q9UPQ9 TNRC6B Q9UPQ9.S1432.p_TNRC6B Q9UPQ9_S1432s _1_1_1432_1432 Q9UPQ9 Q9UPQ9|Q9UPQ9-1|Q9UPQ9-2 Trinucleotide repeat-containing gene 6B protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.30218.30218.4 22.77 16.12 3.313 5 1 1 0 916.7003 3583.8222 S1432s TMT10 1430 (R) GGsPYNQFDIIPGDTLGGHTGPAGDSWLPAK (S) GGS(0.99)PY(0.0)NQFDIIPGDT(0.0)LGGHT(0.0)GPAGDS(0.0)WLPAK K:TMT10,s:Phosphorylated S TNRC6B 194854.6 8 10 865.1 210.19 HUMAN 1 4.8812 24.7455 PGKTTAGSVDWTDQL-p Q9C0C2;S1158-p PGKTTAGSVDWTDQL 0.972663291341913 0.0656495619196631 0.006 -0.210666666666667 0.234816344326395 15.7387609428781 0.006 -0.210666666666667 0.947367246190086 0.0266761963703688 0.0691321817817066 -3.01610064536996 Q9C0C2 TNKS1BP1 Q9C0C2.S1158.p_TNKS1BP1 Q9C0C2_S1158s _1_1_1158_1158 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23773.23972.2 16.62 16.62 2.727 4 1 1 0 964.9679 1848.9653 S1158s TMT10 1154 (K) TTAGsVDWTDQLGLR (N) T(0.0)T(0.0)AGS(0.99)VDWT(0.0)DQLGLR s:Phosphorylated S TNKS1BP1 182819.3 5 49 4.1 2105.7 HUMAN 1 0.2348 -15.7388 PGKVGDVTPQVKGGA-p E7ETY2;T249-p PGKVGDVTPQVKGGA 0.949029310812366 0.00232985334139993 -0.00966666666666668 -1.047 0.450234013850669 40.4880840599817 -0.00966666666666668 -1.047 0.901522558943721 8.93699662655654e-05 -0.129655134220321 -10.3530921874286 E7ETY2 TCOF1 E7ETY2.T249.p_TCOF1 E7ETY2_T249t _1_1_249_249 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13887.13887.4 15.87 15.87 99 1 1 1 0 576.3337 2222.3476 T249t TMT10 238 (K) AAPAPGKVGDVtPQVK (G) AAPAPGKVGDVT(1.0)PQVK K:TMT10,t:Phosphorylated T TCOF1 152529.5 4 6 19.1 1034.65 HUMAN 1 -0.4502 -40.4881 PGLAKQDSFRSRLNP-p Q6ZRV2;S667-p PGLAKQDSFRSRLNP 0.969003701508516 0.0296407360359575 -0.006 -0.326666666666667 0.268407885461656 20.6836115966382 -0.006 -0.326666666666667 0.940067874330206 0.00854355934255543 -0.0787418359266019 -4.02329095065923 Q6ZRV2 FAM83H Q6ZRV2.S667.p_FAM83H Q6ZRV2_S667s _1_1_667_667 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20952.20952.5 16 10.9 1.826 3 1 1 0 920.0833 4516.4192 S667s TMT10 632 (R) VPAAFPTKVPVPGPGSGGNGPEREGPEEPGLAKQDsFR (S) VPAAFPT(0.0)KVPVPGPGS(0.0)GGNGPEREGPEEPGLAKQDS(0.99)FR K:TMT10,s:Phosphorylated S FAM83H 127633.5 6 11 7.1 1347.23 HUMAN 1 -0.2684 -20.6836 PGLAPARSPGPAADG-p Q8IX07;S786-p PGLAPARSPGPAADG 0.470647337426433 0.958580322472258 -0.113333333333333 0.00800000000000003 6.04188011120433 0.264528935670683 -0.113333333333333 0.00799999999999999 0.248778009625831 0.940907881552736 -1.29202076092353 0.0776284194336588 Q8IX07 ZFPM1 Q8IX07.S786.p_ZFPM1 Q8IX07_S786s _1_1_786_786 Q8IX07 Q8IX07 Zinc finger protein ZFPM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18728.18728.3 15.03 15.03 15.028 2 1 1 0 621.6611 1783.0002 S786s TMT10 786 (R) sPGPAADGPIDLSK (K) S(0.99)PGPAADGPIDLS(0.0)K K:TMT10,s:Phosphorylated S ZFPM1 106540.7 3 7 961.1 194.31 HUMAN 1 -6.0419 0.2645 PGLDLSLSPRPDSPQ-p Q8TAP8;S47-p PGLDLSLSPRPDSPQ 0.51928988085149 0.178788388097215 0.113666666666667 0.208333333333333 5.25563914920633 9.83355448450456 0.113666666666667 0.208333333333333 0.298150872835755 0.10390693910598 1.15070572731932 1.95203255136162 Q8TAP8 PPP1R35 Q8TAP8.S47.p_PPP1R35 Q8TAP8_S45sS47sS52s_3_3_45_52 Q8TAP8 Q8TAP8 Protein phosphatase 1 regulatory subunit 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26823.26823.4 8.07 8.07 99 3 3 3 0 699.3271 2554.3827 S45s S47s S52s TMT10 35 (R) APVPEPGLDLsLsPRPDsPQPR (H) APVPEPGLDLS(1.0)LS(1.0)PRPDS(1.0)PQPR s:Phosphorylated S PPP1R35 28123.8 1 6 2252.1 91.23 HUMAN 1 5.2556 9.8336 PGLITPGSPPPAQQN-p P54253;S238-p PGLITPGSPPPAQQN 0.191651529590969 0.732578245008023 0.203 0.0393333333333334 14.0043825735168 1.86361767725284 0.203 0.0393333333333334 0.0397705633351431 0.651085812992274 2.69372317134047 0.478328620935266 P54253 ATXN1 P54253.S238.p_ATXN1 P54253_S238s _1_1_238_238 P54253 P54253 Ataxin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18042.18042.3 18.38 18.38 1.995 7 1 1 0 1136.9031 3328.7236 S238s TMT10 230 (R) APGLITPGsPPPAQQNQYVHISSSPQNTGR (T) APGLIT(0.0)PGS(0.99)PPPAQQNQY(0.0)VHIS(0.0)S(0.0)S(0.0)PQNT(0.0)GR s:Phosphorylated S ATXN1 87263.4 3 2 1702.1 120.26 HUMAN 1 14.0044 1.8636 PGLLPAHSRHNSPSG-p Q8IWB9;S732-p PGLLPAHSRHNSPSG 0.716766307880446 0.00203605351766751 0.116 -0.933 2.72813126005906 42.0266309892565 0.116 -0.933 0.533564435286616 6.27100144826869e-05 0.664630239415646 -11.0815634559478 Q8IWB9 TEX2 Q8IWB9.S732.p_TEX2 Q8IWB9_S732s _1_1_732_732 Q8IWB9 Q8IWB9 Testis-expressed protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9894.9894.4 19.27 15.58 19.274 4 1 1 0 537.0455 2065.1918 S732s TMT10 717 (K) SSGVSGGKPGLLPAHsR (H) S(0.0)S(0.0)GVS(0.0)GGKPGLLPAHS(0.99)R K:TMT10,s:Phosphorylated S TEX2 125928 1 14 300.1 376.78 HUMAN 1 2.7281 -42.0266 PGLLPENSMDCI___-p Q9NVP2;S198-p PGLLPENSMDCI___ 0.300290237622884 0.304503923599905 0.169666666666667 -0.130333333333333 9.82186810934307 6.82060689417826 0.169666666666667 -0.130333333333333 0.104186917497487 0.207940608529312 1.95077883902969 -1.42918864109253 Q9NVP2 ASF1B Q9NVP2.S198.p_ASF1B Q9NVP2_S198s _1_1_198_198 Q9NVP2 Q9NVP2|K7ES22 Histone chaperone ASF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37713.37713.2 17.31 17.31 99 1 1 1 0 1211.5753 2342.1756 S198s TMT10 183 (K) GLGLPGCIPGLLPENsMDCI (-) GLGLPGCIPGLLPENS(1.0)MDCI C:Carbamidomethylation,s:Phosphorylated S ASF1B 22775.5 6 2 3542.1 48.68 HUMAN 1 9.8219 -6.8206 PGLLSQVSPRLLRKA-p Q96Q42;S492-p PGLLSQVSPRLLRKA 0.870035928288019 0.430095562809209 -0.0323333333333334 -0.156 1.18227634449019 4.88054891163434 -0.0323333333333334 -0.156 0.7616796727385 0.325046211686514 -0.318995647229198 -1.08190767363328 Q96Q42 ALS2 Q96Q42.S492.p_ALS2 Q96Q42_S492s _1_1_492_492 Q96Q42 Q96Q42|Q96Q42-3 Alsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24743.24743.3 16.13 16.13 2.419 3 1 1 0 611.351 1752.0693 S492s TMT10 481 (R) RLSLPGLLSQVsPR (L) RLS(0.0)LPGLLS(0.0)QVS(0.99)PR s:Phosphorylated S ALS2 185455.9 8 3 1001.1 189.97 HUMAN 1 -1.1823 -4.8805 PGLNEDESLQRLQKE-p O14936-3;S842-p PGLNEDESLQRLQKE 0.7520734712589 0.651270581249517 -0.047 0.0883333333333334 2.35951673855322 2.54268090854771 -0.047 0.0883333333333333 0.580829045712599 0.556841903190783 -0.587025544658018 0.625809665249597 O14936 CASK O14936.3.S842.p_CASK O14936-3_S842s _1_1_842_842 O14936-3 O14936-3|O14936-5|Q5JS72 Isoform 3 of Peripheral plasma membrane protein CASK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.37237.37237.4 21.83 16.91 2.876 4 1 1 0 836.4279 3262.7197 S842s TMT10 818 (R) TAEFAPFVVFIAAPTITPGLNEDEsLQR (L) T(0.0)AEFAPFVVFIAAPT(0.0)IT(0.0)PGLNEDES(0.99)LQR s:Phosphorylated S CASK 103024.6 1 10 1824.1 112.53 HUMAN 1 -2.3595 2.5427 PGLNWDISPKNGLKT-p Q659A1;S17-p PGLNWDISPKNGLKT 0.0869195095593095 0.00926447542666619 -0.387333333333333 -0.441333333333333 22.6303035630512 28.7145624920561 -0.387333333333333 -0.43959570172068 0.00545719715054763 0.00134444719936213 -4.46757126171781 -6.04132213753986 Q659A1 ICE2 Q659A1.S17.p_ICE2 Q659A1_S17s _1_1_17_17 Q659A1 Q659A1|H0YNU9|Q659A1-2 Little elongation complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30701.30701.3 19.91 19.91 8.359 2 1 1 0 742.0536 2144.1826 S17s TMT10 5 (K) MVISEPGLNWDIsPK (N) MVIS(0.0)EPGLNWDIS(0.99)PK K:TMT10,s:Phosphorylated S ICE2 111036.5 3 1 1160.1 171.12 HUMAN 1 -22.6303 -28.7146 PGLPAEGSPPPKTYV-p Q92667;S429-p PGLPAEGSPPPKTYV 0.710488445890013 0.362727963993222 0.054 -0.0876666666666667 2.79201604857289 5.83995837330905 0.054 -0.0876666666666667 0.52577313935286 0.260617852983926 0.677842275751289 -1.25570924179534 Q92667 AKAP1 Q92667.S429.p_AKAP1 Q92667_S429s _1_1_429_429 Q92667 Q92667|Q92667-2 A-kinase anchor protein 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32313.32719.4 27.7 27.7 4.529 4 1 1 0 1028.2926 4030.1789 S429s TMT10 396 (K) TVLGPDTAEPATAEAAVAPPDAGLPLPGLPAEGsPPPK (T) T(0.0)VLGPDT(0.0)AEPAT(0.0)AEAAVAPPDAGLPLPGLPAEGS(0.99)PPPK K:TMT10,s:Phosphorylated S AKAP1 98309.7 5 5 1004.1 189.36 HUMAN 1 2.792 -5.84 PGLPTRTSPVRGSKR-p Q8IY17-4;S362-p PGLPTRTSPVRGSKR 0.72251740159762 0.159474309005261 0.0706666666666667 -0.323333333333333 2.67105294128967 10.4877410824553 0.0706666666666667 -0.323333333333333 0.540623233659286 0.089377024402757 0.652769132957305 -2.06570833100396 Q8IY17 PNPLA6 Q8IY17.4.S362.p_PNPLA6 Q8IY17-4_S362s _1_1_362_362 Q8IY17-4 Q8IY17-4|Q8IY17-3|Q8IY17-2|Q8IY17-5 Isoform 4 of Neuropathy target esterase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18543.18543.4 16.97 16.97 1.729 5 1 1 0 609.5965 2355.3913 S362s TMT10 351 (R) LFPSPGLPTRTsPVRGSK (R) LFPS(0.0)PGLPT(0.0)RT(0.0)S(0.99)PVRGS(0.0)K K:TMT10,s:Phosphorylated S PNPLA6 152434.6 5 1 2719.1 72.93 HUMAN 1 2.6711 -10.4877 PGLQVPVSPTVPIQN-p Q03164-3;S3039-p PGLQVPVSPTVPIQN 0.541115801504562 0.0777555971827763 -0.083 -0.196666666666667 4.91937411854913 14.7151158280279 -0.083 -0.196666666666667 0.322153302754878 0.0337666842815877 -1.08926206365133 -2.82339010412018 Q03164 KMT2A Q03164.3.S3039.p_KMT2A Q03164-3_S3039s _1_1_3039_3039 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22105.22118.2 20.53 17.21 1.259 5 1 1 0 1365.2345 2649.4976 S3039s TMT10 3028 (R) NSSTPGLQVPVsPTVPIQNQK (Y) NS(0.0)S(0.0)T(0.0)PGLQVPVS(0.99)PT(0.0)VPIQNQK K:TMT10,s:Phosphorylated S KMT2A 436608.3 4 37 26.1 936.8 HUMAN 1 -4.9194 -14.7151 PGLRHNGSLSPGLEA-p Q9C0C2;S1383-p PGLRHNGSLSPGLEA 0.184234271280265 0.862879842136666 -0.314 -0.069 14.4424665172387 0.904271911901823 -0.314 -0.0690000000000001 0.035954507835571 0.812031373350386 -2.77452457014587 -0.24966632747611 Q9C0C2 TNKS1BP1 Q9C0C2.S1383.p_TNKS1BP1 Q9C0C2_S1383sS1385s_2_2_1383_1385 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13670.13670.3 9.48 9.48 99 2 2 2 0 693.6402 1918.973 S1383s S1385s Hydrogen 1380 (R) HNGsLsPGLEARDPLEAR (E) HNGS(1.0)LS(1.0)PGLEARDPLEAR s:Phosphorylated S TNKS1BP1 182819.3 2 85 4.1 2105.7 HUMAN 1 -14.4425 -0.9043 PGLRRSDSLLSFRLD-p Q00587;S192-p PGLRRSDSLLSFRLD 0.677958358851087 0.130564668304362 -0.0916666666666667 -0.386333333333333 3.15905597884898 11.6528331411779 -0.0916666666666667 -0.386333333333333 0.483163815414554 0.0683465639685026 -0.752537288182586 -2.26980969143518 Q00587 CDC42EP1 Q00587.S192.p_CDC42EP1 Q00587_S192s _1_1_192_192 Q00587 Q00587|Q00587-2 Cdc42 effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20042.20042.2 13.82 6.14 2.025 3 1 1 0 617.307 1153.6415 S192s TMT10 190 (R) SDsLLSFR (L) S(0.0)DS(0.99)LLS(0.0)FR s:Phosphorylated S CDC42EP1 40408.2 4 6 1362.1 149.93 HUMAN 1 -3.1591 -11.6528 PGLVAPESPVRKSPS-p O15021;S1782-p PGLVAPESPVRKSPS 0.304557287260952 0.304138110876107 -0.248 -0.0986666666666667 9.67413922486068 6.82688618655562 -0.248 -0.0986666666666667 0.107791887690767 0.207640172663138 -1.92514869409674 -1.4302898121117 O15021 MAST4 O15021.S1782.p_MAST4 O15021_S1782s _1_1_1782_1782 O15021 O15021|J3QT34|O15021-1|E7EWQ5|O15021-3|O15021-2 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14017.14017.4 14.23 14.23 8.906 3 1 1 0 684.1341 2653.5492 S1782s TMT10 1768 (R) VDSGTEKPGLVAPEsPVRK (S) VDS(0.0)GT(0.0)EKPGLVAPES(0.99)PVRK K:TMT10,s:Phosphorylated S MAST4 286597.7 2 11 121.99 549.41 HUMAN 1 -9.6741 -6.8269 PGLYKSSSADSLSTT-p Q9UQ84;S746-p PGLYKSSSADSLSTT 0.529434722423025 0.000952253650599092 -0.104333333333333 -1.63433333333333 5.10992952677387 53.366930929883 -0.104333333333333 -1.63433333333333 0.308323798173113 4.60581942423495e-06 -1.12416563093822 -18.1470113884924 Q9UQ84 EXO1 Q9UQ84.S746.p_EXO1 Q9UQ84_S746s _1_1_746_746 Q9UQ84 Q9UQ84|Q9UQ84-4 Exonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8952.8952.2 13.57 13.57 1.107 7 1 1 0 811.4078 1541.8423 S746s TMT10 744 (K) SSsADSLSTTK (I) S(0.0)S(0.0)S(0.99)ADS(0.0)LS(0.0)T(0.0)T(0.0)K K:TMT10,s:Phosphorylated S EXO1 95242.6 2 8 1477.1 139.01 HUMAN 1 -5.1099 -53.3669 PGMKRASSLNVLNVG-p Q07866-6;S591-p PGMKRASSLNVLNVG 0.888441416472976 0.546870190039904 0.021 -0.0766666666666666 1.00097787124998 3.52482891223239 0.021 -0.0766666666666666 0.794149401390017 0.444137157544164 0.274123698152264 -0.825007898832019 Q07866 KLC1 Q07866.6.S591.p_KLC1 Q07866-6_S591s _1_1_591_591 Q07866-6 Q07866-9|Q07866-4|G3V5R9|Q07866-6|Q07866-7 Isoform N of Kinesin light chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21919.21919.2 14.87 14.87 1.116 2 1 1 0 848.9745 1616.9736 S591s TMT10 589 (R) ASsLNVLNVGGK (A) AS(0.0)S(0.99)LNVLNVGGK K:TMT10,s:Phosphorylated S KLC1 71518.1 14 10 1242.1 162.93 HUMAN 1 1.001 -3.5248 PGMQDPLSPKAPLIC-p Q7Z5J4;S892-p PGMQDPLSPKAPLIC 0.722203606353444 0.110182443862731 0.0486666666666667 0.308666666666667 2.67413044137247 12.650882314976 0.0486666666666667 0.308666666666667 0.540240272612178 0.0543139975676911 0.65341003854561 2.44704425592987 Q7Z5J4 RAI1 Q7Z5J4.S892.p_RAI1 Q7Z5J4_S892s _1_1_892_892 Q7Z5J4 Q7Z5J4|Q7Z5J4-2|A0A1W2PQJ7|Q7Z5J4-3|Q7Z5J4-4 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28823.28823.5 23.1 17.97 1.748 5 1 1 0 906.6448 4449.2409 S892s TMT10 862 (R) KEDLEAEEEYSSLCELLGSPEQRPGMQDPLsPK (A) KEDLEAEEEY(0.0)S(0.0)S(0.0)LCELLGS(0.0)PEQRPGMQDPLS(0.99)PK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RAI1 206315.3 3 7 142.1 522.21 HUMAN 1 2.6741 12.6509 PGMVLDGSPKGAAVE-p Q9BUK6;S495-p PGMVLDGSPKGAAVE 0.70004138781017 0.765178692111451 -0.0586666666666667 0.03 2.90919155379076 1.60593157479401 -0.0586666666666667 0.03 0.511777094808459 0.690886716219986 -0.701906947388443 0.419603977653338 Q9BUK6 MSTO1 Q9BUK6.S495.p_MSTO1 Q9BUK6_S495s _1_1_495_495 Q9BUK6 Q9BUK6|Q9BUK6-2|Q9BUK6-5|Q9BUK6-6 Protein misato homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27257.27257.4 18.47 18.47 5.326 5 1 1 0 770.3867 2998.5571 S495s TMT10 474 (R) VAPPYPHLFSSCSPPGMVLDGsPK (G) VAPPY(0.0)PHLFS(0.0)S(0.0)CS(0.0)PPGMVLDGS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MSTO1 62747.2 4 2 3893.1 41.24 HUMAN 1 -2.9092 1.6059 PGNEKVLSLLALVKP-p A0A087X1Z3;S117-p PGNEKVLSLLALVKP 0.948413989552235 0.0142372187802329 -0.0103333333333333 0.411333333333333 0.456857187164733 25.6069897019918 -0.0103333333333334 0.411333333333333 0.900148746991384 0.00274979950722298 -0.131476180260209 5.19248272175524 A0A087X1Z3 NotFound A0A087X1Z3.S117.p_NotFound A0A087X1Z3_S117s _1_1_117_117 A0A087X1Z3 A0A087X1Z3|Q9UL46 Proteasome activator complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.37387.37387.3 18.66 18.66 9.953 2 1 1 0 859.5317 2496.6136 S117s TMT10 115 (K) VLsLLALVKPEVWTLK (E) VLS(0.99)LLALVKPEVWT(0.0)LK K:TMT10,s:Phosphorylated S PSME2 29297.3 1 2 3392.1 52.19 HUMAN 1 -0.4569 25.607 PGNNLTKSLLNIHDK-p Q49A88;S670-p PGNNLTKSLLNIHDK 0.723063863780764 0.00377230104265856 -0.087 -1.08233333333333 2.66455125333352 35.9320416041192 -0.087 -1.08233333333333 0.541433190059513 0.000255150156816673 -0.651414597039485 -8.44374127882333 Q49A88 CCDC14 Q49A88.S670.p_CCDC14 Q49A88_S670s _1_1_670_670 Q49A88 Q49A88|Q49A88-6|J3QT39|A0A0A0MR27|Q49A88-5|Q49A88-3|Q49A88-2 Coiled-coil domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15726.15726.3 14.44 10.86 99 1 1 1 0 493.2777 1397.8517 S670s TMT10 670 (K) sLLNIHDK (Q) S(1.0)LLNIHDK K:TMT10,s:Phosphorylated S CCDC14 107269.8 1 4 1707.1 120.05 HUMAN 1 -2.6646 -35.932 PGPAEPDSDDDSSDL-p Q9NPB6;S278-p PGPAEPDSDDDSSDL 0.23797684518109 0.942033088217706 0.205666666666667 -0.00766666666666665 11.9274238851693 0.371197384165259 0.205666666666667 -0.00766666666666666 0.0641590037211622 0.918079439838622 2.31946820111463 -0.107736144258666 Q9NPB6 PARD6A Q9NPB6.S278.p_PARD6A Q9NPB6_S278s _1_1_278_278 Q9NPB6 Q9NPB6|Q9NPB6-2|R4GMM2 Partitioning defective 6 homolog alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20786.20786.3 25.59 25.59 3.738 5 1 1 0 1039.8119 3037.4435 S278s TMT10 263 (R) LTGPPSAGPGPAEPDsDDDSSDLVIENR (Q) LT(0.0)GPPS(0.0)AGPGPAEPDS(0.99)DDDS(0.0)S(0.0)DLVIENR s:Phosphorylated S PARD6A 37501.7 4 1 2949.1 64.95 HUMAN 1 11.9274 -0.3712 PGPASKCSPCERSVA-p C9J069;S30-p PGPASKCSPCERSVA 0.972247636963192 0.350819473554534 0.00899999999999999 -0.112333333333333 0.237367274233284 6.03062442148923 0.00899999999999999 -0.112333333333333 0.946810951339993 0.249423608398421 0.0698642671244785 -1.28970897476069 C9J069 C9orf172 C9J069.S30.p_C9orf172 C9J069_S30s _1_1_30_30 C9J069 C9J069 Uncharacterized protein C9orf172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8308.8308.3 10.98 10.98 1.455 3 1 1 0 719.0186 2075.0778 S30s TMT10 20 (K) VATPGPASKCsPCER (S) VAT(0.0)PGPAS(0.0)KCS(0.99)PCER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S C9orf172 107960.6 1 1 430.1 316.49 HUMAN 1 0.2374 -6.0306 PGPDSSGSLGSGEFT-p Q9UBC2-2;S374-p PGPDSSGSLGSGEFT 0.643897177514816 0.428831946435098 0.062 0.0823333333333333 3.57500443408569 4.89548009367893 0.062 0.0823333333333334 0.439035417391718 0.323930611333949 0.834966491363387 1.08465367581608 Q9UBC2 EPS15L1 Q9UBC2.2.S374.p_EPS15L1 Q9UBC2-2_S374s _1_1_374_374 Q9UBC2-2 Q9UBC2-2|M0R165|Q9UBC2-3|Q9UBC2-4|M0R2S2 Isoform 2 of Epidermal growth factor receptor substrate 15-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18227.18227.3 14.66 14.66 1.156 6 1 1 0 792.3906 2295.1869 S374s TMT10 365 (R) GTPGPDSSGsLGSGEFTGVK (E) GT(0.0)PGPDS(0.0)S(0.0)GS(0.99)LGS(0.0)GEFT(0.0)GVK K:TMT10,s:Phosphorylated S EPS15L1 99718.3 9 7 109.1 576.24 HUMAN 1 3.575 4.8955 PGPEGEGSLESQPPP-p O94992;S66-p PGPEGEGSLESQPPP 0.344220109355696 0.064041298675641 0.158 0.325333333333333 8.60056885760131 15.887592792897 0.158 0.325333333333333 0.138020346777276 0.0257774955591493 1.73921920858091 3.04450402083161 O94992 HEXIM1 O94992.S66.p_HEXIM1 O94992_S66s _1_1_66_66 O94992 O94992 Protein HEXIM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19667.19667.5 24.88 18.81 1.164 5 1 1 0 964.0748 4736.3449 S66s TMT10 51 (R) AFPQLGGRPGPEGEGsLESQPPPLQTQACPESSCLREGEK (G) AFPQLGGRPGPEGEGS(0.99)LES(0.0)QPPPLQT(0.0)QACPES(0.0)S(0.0)CLREGEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HEXIM1 40908 2 1 1285.2 158.28 HUMAN 1 8.6006 15.8876 PGPGGSNTAPSTPVI-p A0FGR8-6;T722-p PGPGGSNTAPSTPVI 0.301590454921122 0.721090713630461 0.174 -0.0513333333333333 9.76544693981004 1.9577534443654 0.174 -0.0513333333333333 0.105549287506626 0.637125013154452 1.94098787895896 -0.499368246829377 A0FGR8 ESYT2 A0FGR8.6.T722.p_ESYT2 A0FGR8-6_T722t _1_1_722_722 A0FGR8-6 A0FGR8-6|A0A087WXU3|A0FGR8-2|A0FGR8-5 Isoform 6 of Extended synaptotagmin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13654.13654.4 22.37 22.37 1.7 8 1 1 0 955.9655 3740.8827 T722t TMT10 709 (K) SHMSGSPGPGGSNtAPSTPVIGGSDKPGMEEK (A) S(0.0)HMS(0.0)GS(0.0)PGPGGS(0.0)NT(0.99)APS(0.0)T(0.0)PVIGGS(0.0)DKPGMEEK K:TMT10,t:Phosphorylated T ESYT2 105219.8 4 4 1886.1 109.02 HUMAN 1 9.7654 -1.9578 PGPGPAHSPQPSKRA-p Q8TDM6;S1000-p PGPGPAHSPQPSKRA 0.499640884227713 0.136154846642496 -0.163 0.165 5.55446022283445 11.4105617942906 -0.163 0.165 0.278326127912864 0.0722676313653667 -1.20476560753247 2.2271515191195 Q8TDM6 DLG5 Q8TDM6.S1000.p_DLG5 Q8TDM6_S1000s _1_1_1000_1000 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17722.17722.5 24.43 19.23 3.438 4 1 1 0 689.9846 3365.9301 S1000s TMT10 981 (K) RPQTPPKIDYLLPGPGPAHsPQPSK (R) RPQT(0.0)PPKIDY(0.0)LLPGPGPAHS(0.99)PQPS(0.0)K K:TMT10,s:Phosphorylated S DLG5 215575.4 8 22 34.1 890.58 HUMAN 1 -5.5545 11.4106 PGPGWAGSPKTEKEK-p Q96PV7;S785-p PGPGWAGSPKTEKEK 0.107745151854256 0.00800627488816744 -0.311333333333333 -0.639333333333333 20.3812381111467 29.8812940666009 -0.311333333333333 -0.639333333333334 0.00915959326057943 0.00102771002590017 -3.96125007622693 -6.38601862287294 Q96PV7 FAM193B Q96PV7.S785.p_FAM193B Q96PV7_S785s _1_1_785_785 Q96PV7 Q96PV7|Q96PV7-3|Q96PV7-2 Protein FAM193B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9152.9152.3 9.9 5.3 3.744 2 1 1 0 597.9825 1711.9644 S785s TMT10 775 (R) GSRPGPGWAGsPK (T) GS(0.0)RPGPGWAGS(0.99)PK K:TMT10,s:Phosphorylated S FAM193B 98024.3 2 1 5545.1 18.29 HUMAN 1 -20.3812 -29.8813 PGPKLDNSPNMNITQ-p Q9Y6Q9;S551-p PGPKLDNSPNMNITQ 0.290079611219067 0.0786593056943741 0.195 0.317333333333333 10.1296264852194 14.6586929828458 0.195 0.317333333333333 0.0970593439502545 0.0342082377338303 2.00424028269826 2.81289596795877 Q9Y6Q9 NCOA3 Q9Y6Q9.S551.p_NCOA3 Q9Y6Q9_S551s _1_1_551_551 Q9Y6Q9 Q9Y6Q9|Q9Y6Q9-5|Q9Y6Q9-3|Q9Y6Q9-2|Q9Y6Q9-4 Nuclear receptor coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16715.16715.3 13.92 11.64 4.903 3 1 1 0 699.6871 2017.0788 S551s TMT10 548 (K) LDNsPNMNITQPSK (V) LDNS(0.99)PNMNIT(0.0)QPS(0.0)K K:TMT10,s:Phosphorylated S NCOA3 156203.6 3 4 503.1 290.6 HUMAN 1 10.1296 14.6587 PGPLQERSLFEKKRG-p A8MXP9;S264-p PGPLQERSLFEKKRG 0.465616510186216 0.49641731294961 -0.117666666666667 -0.132666666666667 6.12501414025463 4.06775661978695 -0.117666666666667 -0.132666666666667 0.244061112160924 0.391944286540431 -1.30680336271308 -0.929899906763372 A8MXP9 NotFound A8MXP9.S264.p_NotFound A8MXP9_S264s _1_1_264_264 A8MXP9 A8MXP9|P43243|D6REM6 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19381.19381.3 10.29 10.29 99 1 1 1 0 666.0251 1916.1006 S264s TMT10 256 (R) GPGPLQERsLFEK (K) GPGPLQERS(1.0)LFEK K:TMT10,s:Phosphorylated S MATR3 100478.9 2 18 92.1 615.57 HUMAN 1 -6.125 -4.0678 PGPPAAASPCLGPVA-p Q8WWM7-3;S56-p PGPPAAASPCLGPVA 0.372999967794591 0.592483040580829 -0.126 0.064 7.94434596329028 3.07594728395898 -0.126 0.064 0.160533399920916 0.492498907676619 -1.62550460623866 0.73569151282045 Q8WWM7 ATXN2L Q8WWM7.3.S56.p_ATXN2L Q8WWM7-3_S56s_1_1_56_56 Q8WWM7-3 Q8WWM7-3 Isoform 3 of Ataxin-2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24778.24778.5 25.79 19.27 2.199 6 1 1 0 867.6436 4253.2451 N35n S56s TMT10 26 (R) RPPGGTSPPnGGLPGPLATSAAPPGPPAAAsPCLGPVAAAGSGLR (R) RPPGGT(0.0)S(0.0)PPN(1.0)GGLPGPLAT(0.0)S(0.0)AAPPGPPAAAS(0.99)PCLGPVAAAGS(0.0)GLR C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S ATXN2L 116093.7 2 3 184.1 476.17 HUMAN 1 -7.9443 3.0759 PGPPFNITPRKAKKY-p Q9NZM1;T1781-p PGPPFNITPRKAKKY 0.453195332145344 0.0513558148363368 0.122333333333333 0.293333333333333 6.34110176074222 17.2119546283255 0.122333333333333 0.293333333333333 0.232214761649367 0.019002228545086 1.34510838437518 3.30194298794879 Q9NZM1 MYOF Q9NZM1.T1781.p_MYOF Q9NZM1_T1781t _1_1_1781_1781 Q9NZM1 Q9NZM1|Q9NZM1-6|Q9NZM1-2|Q9NZM1-5 Myoferlin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24248.24248.3 12.65 11.19 12.651 2 1 1 0 586.9764 1678.9478 T1781t TMT10 1770 (K) SLGPPGPPFNItPR (K) S(0.0)LGPPGPPFNIT(0.99)PR t:Phosphorylated T MYOF 236244.8 2 12 829.1 216.58 HUMAN 1 6.3411 17.212 PGPPGPRSPQREPQR-p O96013;S291-p PGPPGPRSPQREPQR 0.560899556742354 0.838151620190966 0.113333333333333 0.024 4.62406723835911 1.07766539036392 0.113333333333333 0.024 0.344820657927411 0.780249431605631 1.03469281534049 0.293218902891992 O96013 PAK4 O96013.S291.p_PAK4 O96013_S291s _1_1_291_291 O96013 O96013|O96013-4|O96013-3 Serine/threonine-protein kinase PAK 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17075.17075.5 24.83 23 3.991 4 1 1 0 933.4774 4583.3891 S291s TMT10 255 (R) GAPSPGVLGPHASEPQLAPPACTPAAPAVPGPPGPRsPQREPQR (V) GAPS(0.0)PGVLGPHAS(0.0)EPQLAPPACT(0.0)PAAPAVPGPPGPRS(0.99)PQREPQR C:Carbamidomethylation,s:Phosphorylated S PAK4 64356.2 3 8 573.1 269.06 HUMAN 1 4.6241 1.0777 PGPPRRLSAPLPSSC-p Q96EP0;S466-p PGPPRRLSAPLPSSC 0.665173352647698 0.0438027386913781 -0.06 0.429333333333333 3.31255167389239 18.1999939461917 -0.06 0.429333333333333 0.466385277634559 0.0151356335825258 -0.783210566149327 3.49994832091163 Q96EP0 RNF31 Q96EP0.S466.p_RNF31 Q96EP0_S466s _1_1_466_466 Q96EP0 Q96EP0|Q96EP0-3 E3 ubiquitin-protein ligase RNF31 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14059.14059.3 16.52 12.97 4.596 3 1 1 0 718.0342 2072.121 S466s TMT10 464 (R) RLsAPLPSSCGDPEK (Q) RLS(0.99)APLPS(0.0)S(0.0)CGDPEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RNF31 122730.8 5 2 4325.1 33.53 HUMAN 1 -3.3126 18.2 PGPPTPRSPKAQRPV-p Q8N8Q3-3;S216-p PGPPTPRSPKAQRPV 0.396799041847912 0.792383091404525 0.117 0.032 7.41103072563645 1.4080147529192 0.117 0.032 0.181508483148889 0.723100271684982 1.53278729360182 0.373270538240275 Q8N8Q3 ENDOV Q8N8Q3.3.S216.p_ENDOV Q8N8Q3-3_S216s _1_1_216_216 Q8N8Q3-3 Q8N8Q3|Q8N8Q3-3|Q8N8Q3-2|H0YAY5|I3L0L4|Q8N8Q3-5 Isoform 3 of Endonuclease V HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16666.16666.3 13.73 9.2 2.065 3 1 1 0 648.0356 1862.1264 S216s TMT10 205 (K) SLGLPGPPTPRsPK (A) S(0.0)LGLPGPPT(0.0)PRS(0.99)PK K:TMT10,s:Phosphorylated S ENDOV 29015.5 8 2 2332.1 87.5 HUMAN 1 7.411 1.408 PGPQRSHSSSEAYEP-p Q8IVF2;S280-p PGPQRSHSSSEAYEP 0.310677599800396 0.168434999715673 0.406333333333333 -0.203666666666667 9.4901064321071 10.1755109093237 0.406333333333333 -0.203666666666667 0.112457741372489 0.0960392829957316 1.89324364034846 -2.0113903420053 Q8IVF2 AHNAK2 Q8IVF2.S280.p_AHNAK2 Q8IVF2_S280s _1_1_280_280 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4553.4553.2 11.32 5.75 1.101 5 1 1 0 779.8411 1478.7073 S280s TMT10 278 (R) SHsSSEAYEPR (D) S(0.0)HS(0.99)S(0.0)S(0.0)EAY(0.0)EPR s:Phosphorylated S AHNAK2 617759.6 2 3 237.1 418.35 HUMAN 1 9.4901 -10.1755 PGPRKSVSNGALRQD-p Q15678;S760-p PGPRKSVSNGALRQD 0.318913492023343 0.0332491364137189 0.143666666666667 0.286 9.28950046435831 19.9302265945187 0.143666666666667 0.286 0.117774143229653 0.0101619567115715 1.8584891201379 3.8603959664738 Q15678 PTPN14 Q15678.S760.p_PTPN14 Q15678_S760s_1_1_760_760 Q15678 Q15678 Tyrosine-protein phosphatase non-receptor type 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14787.15001.3 11.96 6.78 2.16 3 1 1 0 793.7289 2298.2186 S760s N761n TMT10 758 (K) SVsnGALRQDQASLPPAMAR (A) S(0.0)VS(0.99)N(1.0)GALRQDQAS(0.0)LPPAMAR s:Phosphorylated S,n:Deamidated PTPN14 136114.4 9 14 337.1 355.06 HUMAN 1 9.2895 19.9302 PGPSGSETPPPPRRA-p P27987;T33-p PGPSGSETPPPPRRA 0.836372411785846 0.117989974450961 0.037 0.165333333333333 1.50026659039006 12.2388559124987 0.037 0.165333333333333 0.707902328674206 0.0597192587819964 0.39505019006041 2.37356185024341 P27987 ITPKB P27987.T33.p_ITPKB P27987_T33t _1_1_33_33 P27987 P27987|P27987-2 Inositol-trisphosphate 3-kinase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4542.4542.3 18.07 13.21 2.088 4 1 1 0 666.9913 1918.9933 T33t TMT10 22 (K) SGGGPGPSGSEtPPPPRR (A) S(0.0)GGGPGPS(0.0)GS(0.0)ET(0.99)PPPPRR t:Phosphorylated T ITPKB 103230.2 4 1 424.1 319.61 HUMAN 1 1.5003 12.2389 PGPTGPASPVGPTSS-p Q9Y613;S387-p PGPTGPASPVGPTSS 0.916056654296661 0.321845875951341 0.0233333333333333 -0.221333333333333 0.744840694349951 6.50813543566973 0.0233333333333333 -0.221333333333333 0.842395291178966 0.223453137230245 0.208589970602225 -1.37425599608531 Q9Y613 FHOD1 Q9Y613.S387.p_FHOD1 Q9Y613_S387s _1_1_387_387 Q9Y613 Q9Y613 FH1/FH2 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36297.36297.5 26.82 21.99 1.844 17 1 1 0 1186.797 5849.9923 S387s TMT10 377 (R) APEPGPTGPAsPVGPTSSTGPALLTGPASSPVGPPSGLQASVNLFPTISVAPSADTSSER (S) APEPGPT(0.0)GPAS(0.99)PVGPT(0.0)S(0.0)S(0.0)T(0.0)GPALLT(0.0)GPAS(0.0)S(0.0)PVGPPS(0.0)GLQAS(0.0)VNLFPT(0.0)IS(0.0)VAPS(0.0)ADT(0.0)S(0.0)S(0.0)ER s:Phosphorylated S FHOD1 127404.8 6 2 730.1 236 HUMAN 1 0.7448 -6.5081 PGPTHRGSFD_____-p Q14678;S1350-p PGPTHRGSFD_____ 0.509638221387868 0.96696338861461 0.103666666666667 0.00600000000000001 5.40628154004858 0.20632297831405 0.103666666666667 0.006 0.287986311852831 0.953603205293621 1.17801774346601 0.0609229591486592 Q14678 KANK1 Q14678.S1350.p_KANK1 Q14678_S1350s _1_1_1350_1350 Q14678 Q14678 KN motif and ankyrin repeat domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.4703.4703.3 10.12 10.12 4.622 4 1 1 0 642.326 1845.0019 S1350s TMT10 1340 (R) KTSPGPTHRGsFD (-) KT(0.0)S(0.0)PGPT(0.0)HRGS(0.99)FD K:TMT10,s:Phosphorylated S KANK1 149112.3 2 7 2363.1 86.5 HUMAN 1 5.4063 0.2063 PGPTPEDSPSLETGS-p Q9BQQ3;S241-p PGPTPEDSPSLETGS 0.416481641896136 0.229454883765922 0.128833333333333 0.1595 7.02156360405133 8.42213419807021 0.128833333333333 0.1595 0.198537998607912 0.143809170149186 1.46478728168742 1.70775071745246 Q9BQQ3 GORASP1 Q9BQQ3.S241.p_GORASP1 Q9BQQ3_T237tS241s_2_2_237_241 Q9BQQ3 Q9BQQ3|B4E1H8|B3KPY8|Q9BQQ3-3 Golgi reassembly-stacking protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26294.26294.5 24.36 24.36 1.25 7 2 2 0 863.4378 4153.2221 T237t S241s TMT10 212 (K) KPPGTPPPSALPLGAPPPDALPPGPtPEDsPSLETGSR (Q) KPPGT(0.0)PPPS(0.0)ALPLGAPPPDALPPGPT(0.99)PEDS(0.99)PS(0.0)LET(0.0)GS(0.0)R K:TMT10,t:Phosphorylated T,s:Phosphorylated S GORASP1 46709.8 7 4 2976.1 64.26 HUMAN 2 7.0216 8.4221 PGQAERVSVGKAGTV-p Q7Z2K8;S444-p PGQAERVSVGKAGTV 0.0502987961976786 0.005984952250078 -0.821 -0.561333333333333 28.6415758189131 32.1027531231088 -0.821 -0.561333333333333 0.00136723264107842 0.000616204247646301 -6.02923342140791 -7.08601369808413 Q7Z2K8 GPRIN1 Q7Z2K8.S444.p_GPRIN1 Q7Z2K8_S444s _1_1_444_444 Q7Z2K8 Q7Z2K8|Q7Z2K8-2 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20520.20520.5 22.99 19.66 2.654 3 1 1 0 668.9484 3260.7408 S444s TMT10 424 (K) MDPMCSGKPELLSPGQAERVsVGK (A) MDPMCS(0.0)GKPELLS(0.0)PGQAERVS(0.99)VGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GPRIN1 103196.3 2 11 292.1 381.4 HUMAN 1 -28.6416 -32.1028 PGQCLAQSATGSVAA-p O94886;S795-p PGQCLAQSATGSVAA 0.572796665055968 0.100028043418156 -0.0763333333333334 0.176666666666667 4.45367145480323 13.2157894710533 -0.0763333333333334 0.176666666666667 0.358618636108196 0.0476893115450954 -1.00291520084399 2.5485985570128 O94886 TMEM63A O94886.S795.p_TMEM63A O94886_S795s_1_1_795_795 O94886 O94886 CSC1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23832.23832.4 8 8 1.301 9 1 1 0 1173.0736 4608.295 N782n S795s TMT10 765 (R) TALSPQQQQQQTYGAIHnISGTIPGQCLAQsATGSVAAAPQEA (-) T(0.0)ALS(0.0)PQQQQQQT(0.0)Y(0.0)GAIHN(1.0)IS(0.0)GT(0.0)IPGQCLAQS(0.99)AT(0.0)GS(0.0)VAAAPQEA C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S TMEM63A 93607.9 2 3 4372.1 32.55 HUMAN 1 -4.4537 13.2158 PGQGFGESMYLLSDK-p Q8TD43;S536-p PGQGFGESMYLLSDK 0.092306798909453 0.77799639296451 -0.938333333333333 0.0433333333333333 22.0320570416015 1.50903367694554 -0.938333333333333 0.0433333333333333 0.00626317138458156 0.706474730304449 -4.32926377540498 0.397061005000307 Q8TD43 TRPM4 Q8TD43.S536.p_TRPM4 Q8TD43_S536s _1_1_536_536 Q8TD43 Q8TD43|Q8TD43-3 Transient receptor potential cation channel subfamily M member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26494.26494.3 18.04 18.04 3.758 5 1 1 0 1078.8386 3154.5344 S536s TMT10 519 (R) YPSGGAWDPHPGQGFGEsMYLLSDK (A) Y(0.0)PS(0.0)GGAWDPHPGQGFGES(0.99)MY(0.0)LLS(0.0)DK K:TMT10,s:Phosphorylated S TRPM4 135782 1 6 2606.1 76.95 HUMAN 1 -22.0321 1.509 PGQQETDSSEDEDII-p Q8IXQ4;S140-p PGQQETDSSEDEDII 0.763958217078772 0.0092292356544658 -0.047 0.569166666666667 2.24209763286916 28.7511534856811 -0.047 0.569166666666667 0.596746989472483 0.0013331672960444 -0.561772988134526 6.05190536809727 Q8IXQ4 GPALPP1 Q8IXQ4.S140.p_GPALPP1 Q8IXQ4_S140sS141s_2_2_140_141 Q8IXQ4 Q8IXQ4|A0A0A0MRI1 GPALPP motifs-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19623.19623.3 12.71 13.97 2.31 3 2 2 0 1102.483 3145.4996 S140s S141s TMT10 129 (K) GRDDPGQQETDssEDEDIIGPMPAK (G) GRDDPGQQET(0.0)DS(0.99)S(0.99)EDEDIIGPMPAK K:TMT10,s:Phosphorylated S GPALPP1 38141.2 3 2 2555.1 78.73 HUMAN 2 -2.2421 28.7512 PGQRECDYSIDGINR-p Q9Y4G6;Y1665-p PGQRECDYSIDGINR 0.426535703473181 0.0564462623227807 -0.146 0.254 6.81514576265359 16.6352254977798 -0.146 0.254 0.208202252493528 0.0217008852360834 -1.4286150589339 3.18876568989184 Q9Y4G6 TLN2 Q9Y4G6.Y1665.p_TLN2 Q9Y4G6_Y1665y _1_1_1665_1665 Q9Y4G6 Q9Y4G6|A0A1B0GVU7|H0YN01 Talin-2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11091.11135.3 17.33 11.22 1.612 2 1 1 0 720.6634 2080.0079 Y1665y TMT10 1657 (K) APGQRECDySIDGINR (C) APGQRECDY(0.99)S(0.0)IDGINR C:Carbamidomethylation,y:Phosphorylated Y TLN2 273947.6 7 1 48.1 45.89 HUMAN 1 -6.8151 16.6352 PGQRGPPSPGPAAQP-p Q9NZV5;S13-p PGQRGPPSPGPAAQP 0.397533036246793 0.0134953174819545 0.318666666666667 -0.623666666666667 7.39488321370816 25.9937152903222 0.318666666666667 -0.623666666666667 0.182184606376392 0.00251552403352924 1.52997360655932 -5.29298644963465 Q9NZV5 SEPN1 Q9NZV5.S13.p_SEPN1 Q9NZV5_S13s _1_1_13_13 Q9NZV5 Q9NZV5|Q9NZV5-2|H9KV50 Selenoprotein N HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10756.10756.3 15.24 15.24 99 1 1 1 0 601.6433 1722.9489 S13s TMT10 10 (R) GPPsPGPAAQPPAPPR (R) GPPS(1.0)PGPAAQPPAPPR s:Phosphorylated S SELENON 66240.6 1 1 5929.1 15.24 HUMAN 1 7.3949 -25.9937 PGQRRALSVQASLMT-p P49916;S472-p PGQRRALSVQASLMT 0.474773316010134 0.0257729799287224 0.131 0.295666666666667 5.95939511548383 21.6101770269271 0.131 0.295666666666667 0.253548174731471 0.00690211668888916 1.27732676872758 4.22898127994824 P49916 LIG3 P49916.S472.p_LIG3 P49916_S472s _1_1_472_472 P49916 P49916|P49916-2|P49916-3|P49916-4 DNA ligase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32648.32648.3 10.55 10.55 2.263 3 1 1 0 928.4877 2703.4648 S472s TMT10 470 (R) ALsVQASLMTPVQPMLAEACK (S) ALS(0.99)VQAS(0.0)LMT(0.0)PVQPMLAEACK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LIG3 114388.3 2 4 649.1 254.3 HUMAN 1 5.9594 21.6102 PGRFHVGSAESMLHV-p O75140-4;S579-p PGRFHVGSAESMLHV 0.328677632727316 0.123016182843262 0.134333333333333 0.167666666666667 9.03737193893977 12.0040957107991 0.134333333333333 0.167666666666667 0.124813857613111 0.0630362586603306 1.81483244847215 2.33189708036005 O75140 DEPDC5 O75140.4.S579.p_DEPDC5 O75140-4_S579s _1_1_579_579 O75140-4 O75140|O75140-9|O75140-4|O75140-1|O75140-5|O75140-8 Isoform 4 of GATOR complex protein DEPDC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17001.17001.4 22.57 22.57 4.524 4 1 1 0 659.5756 2555.3139 S579s TMT10 575 (R) FHVGsAESMLHVRPGGYTPQR (A) FHVGS(0.99)AES(0.0)MLHVRPGGY(0.0)T(0.0)PQR s:Phosphorylated S DEPDC5 180421.4 2 5 935.1 198.76 HUMAN 1 9.0374 12.0041 PGRGSPRSPEHNGRG-p Q8NEL9;S11-p PGRGSPRSPEHNGRG 0.584211231259265 0.00885809255924247 -0.103666666666667 -0.57 4.29690805868414 29.0852652145062 -0.103666666666667 -0.57 0.371799836224213 0.00123444992760799 -0.973475193362584 -6.14921196557298 Q8NEL9 DDHD1 Q8NEL9.S11.p_DDHD1 Q8NEL9_S11s _1_1_11_11 Q8NEL9 Q8NEL9|Q8NEL9-4|Q8NEL9-2|A0A087X0H7 Phospholipase DDHD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.2948.2948.3 9.57 9.57 9.569 2 1 1 0 501.5732 1422.7399 S11s TMT10 7 (R) GSPRsPEHNGR (G) GS(0.0)PRS(0.99)PEHNGR s:Phosphorylated S DDHD1 101175.1 1 1 3457.1 50.46 HUMAN 1 -4.2969 -29.0853 PGRHRRFTGDSGIEV-p Q9NX94-2;T268-p PGRHRRFTGDSGIEV 0.520965525596197 0.710472356716751 -0.182 0.0506666666666667 5.2353574175481 2.04062986273664 -0.182 0.0506666666666667 0.29954650602065 0.625082029770229 -1.14701893057677 0.517720569960015 Q9NX94 WBP1L Q9NX94.2.T268.p_WBP1L Q9NX94-2_T268tS271s_2_2_268_271 Q9NX94-2 Q9NX94-2 Isoform 2 of WW domain binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16283.16283.3 9.28 9.28 99 2 2 2 0 720.3065 1998.9687 T268t S271s TMT10 266 (R) RFtGDsGIEVCVCNR (G) RFT(1.0)GDS(1.0)GIEVCVCNR C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S WBP1L 41065.9 1 6 2953.1 64.8 HUMAN 1 -5.2354 2.0406 PGRHVIPSPSTDRIN-p Q9BY12;S185-p PGRHVIPSPSTDRIN 0.41330138595586 0.0169048692505771 -0.143 -0.341333333333333 7.07943968859853 24.4495126457649 -0.143 -0.340810737359604 0.195909741303065 0.00358962214212728 -1.47491167171017 -4.89975210238807 Q9BY12 SCAPER Q9BY12.S185.p_SCAPER Q9BY12_S185s _1_1_185_185 Q9BY12 Q9BY12|Q9BY12-2 S phase cyclin A-associated protein in the endoplasmic reticulum HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11580.11580.3 11.92 11.92 2 5 1 1 0 758.392 2193.1937 S185s TMT10 181 (R) HVIPsPSTDRINVTSNAR (R) HVIPS(0.99)PS(0.0)T(0.0)DRINVT(0.0)S(0.0)NAR s:Phosphorylated S SCAPER 159939.1 1 3 3706.1 44.82 HUMAN 1 -7.0794 -24.4495 PGRKRDFSPVPWSQY-p Q9Y570-4;S42-p PGRKRDFSPVPWSQY 0.790671547034773 0.240505705960235 -0.049 0.122666666666667 1.96876607960812 8.15539090500286 -0.049 0.122666666666667 0.635511468147623 0.152918809922171 -0.501873901007654 1.66156904269544 Q9Y570 PPME1 Q9Y570.4.S42.p_PPME1 Q9Y570-4_S42s _1_1_42_42 Q9Y570-4 Q9Y570-4 Isoform 4 of Protein phosphatase methylesterase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31445.31445.5 26.63 26.63 4.073 6 1 1 0 833.3872 4082.9482 S42s TMT10 39 (K) RDFsPVPWSQYFESMEDVEVENETGKDTFR (V) RDFS(0.99)PVPWS(0.0)QY(0.0)FES(0.0)MEDVEVENET(0.0)GKDT(0.0)FR K:TMT10,s:Phosphorylated S PPME1 44268.8 26 2 1384.1 148.18 HUMAN 1 -1.9688 8.1554 PGRMGLLSPSGIGGV-p Q5PRF9;S592-p PGRMGLLSPSGIGGV 0.819842974577855 0.0327039989360657 0.0473333333333333 -0.392333333333333 1.66228836432995 20.0424214703422 0.0473333333333333 -0.392333333333333 0.681979254109002 0.00990279646505532 0.432642877766846 -3.88441573828751 Q5PRF9 SAMD4B Q5PRF9.S592.p_SAMD4B Q5PRF9_S592s _1_1_592_592 Q5PRF9 Q5PRF9|M0QZ22|A0A087WZT0 Protein Smaug homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25199.25199.3 15.46 15.46 1.22 3 1 1 0 579.6379 1656.9304 S592s TMT10 588 (R) MGLLsPSGIGGVSPR (H) MGLLS(0.99)PS(0.0)GIGGVS(0.0)PR s:Phosphorylated S SAMD4B 75938.6 2 7 1599.1 128.75 HUMAN 1 1.6623 -20.0424 PGRPPAPSSEEEDGE-p Q96KN1;S299-p PGRPPAPSSEEEDGE 0.665544717655066 0.374802217577547 0.067 0.0863333333333334 3.30497591889856 5.65735835921204 0.067 0.0863333333333333 0.467199541729401 0.271809207353878 0.781703946683289 1.22299979139183 Q96KN1 FAM84B Q96KN1.S299.p_FAM84B Q96KN1_S299sS300s_2_2_299_300 Q96KN1 Q96KN1 Protein FAM84B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11055.11055.3 10.96 10.96 4.128 4 2 2 0 906.3937 2557.2368 S299s S300s TMT10 288 (R) TTPPPGRPPAPssEEEDGEAVAH (-) T(0.0)T(0.0)PPPGRPPAPS(0.99)S(0.99)EEEDGEAVAH s:Phosphorylated S FAM84B 34701.9 9 7 1802.1 114.13 HUMAN 1 3.305 5.6574 PGRPQPDSGRRRRRR-p P51991;S14-p PGRPQPDSGRRRRRR 0.257518332951923 0.0157592260547454 0.175666666666667 -0.452333333333333 11.1951933028654 24.9158893799233 0.175666666666667 -0.452333333333333 0.0759417620518592 0.00322411899309702 2.19034142692047 -5.01627213730509 P51991 HNRNPA3 P51991.S14.p_HNRNPA3 P51991_S14s _1_1_14_14 P51991 P51991 Heterogeneous nuclear ribonucleoprotein A3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7708.7708.3 7.66 7.89 99 1 1 1 0 752.3822 2175.1654 S14s Acetyl 1 (-) MEVKPPPGRPQPDsGRR (R) MEVKPPPGRPQPDS(1.0)GRR K:TMT10,s:Phosphorylated S HNRNPA3 39822.5 10 1 2139.1 96.03 HUMAN 1 11.1952 -24.9159 PGRPRRGSLPAGASW-p J3KPC5;S17-p PGRPRRGSLPAGASW 0.47756957700383 0.084633414096391 -0.124333333333333 0.310333333333333 5.90453588520482 14.1970174280759 -0.124333333333333 0.310333333333333 0.25677125955967 0.0380450585842941 -1.26753873791232 2.72749929397199 J3KPC5 NotFound J3KPC5.S17.p_NotFound J3KPC5_S17s_1_1_17_17 J3KPC5 J3KPC5|P47736-3 RAP1, GTPase activating protein 1, isoform CRA_e HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31178.31178.4 12.73 10 1.201 3 1 1 0 723.1172 2808.4755 S17s N26n TMT10 15 (R) RGsLPAGASWQnTDLFEMIEK (M) RGS(0.99)LPAGAS(0.0)WQN(1.0)T(0.0)DLFEMIEK K:TMT10,s:Phosphorylated S,n:Deamidated RAP1GAP 77232.3 1 1 3303.1 54.4 HUMAN 1 -5.9045 14.197 PGRQRRDSGVGSGLE-p Q12770;S822-p PGRQRRDSGVGSGLE 0.665963549803557 0.566896273478345 0.0713333333333333 0.0676666666666667 3.30062403285387 3.32457343053889 0.0713333333333333 0.0676666666666667 0.467667937779409 0.465096056238383 0.78083813643267 0.785482585105194 Q12770 SCAP Q12770.S822.p_SCAP Q12770_S822s _1_1_822_822 Q12770 Q12770|Q12770-2|A0A0A0MTG6|Q12770-4 Sterol regulatory element-binding protein cleavage-activating protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12531.12531.3 19.47 19.47 4.514 3 1 1 0 724.6693 2092.0257 S822s TMT10 820 (R) RDsGVGSGLEAQESWER (L) RDS(0.99)GVGS(0.0)GLEAQES(0.0)WER s:Phosphorylated S SCAP 141666.3 3 2 1353.1 150.81 HUMAN 1 3.3006 3.3246 PGRSSVASPRRLSNV-p P11137;S1790-p PGRSSVASPRRLSNV 0.895466992137845 0.0749528269661392 0.022 0.209 0.938043007080917 14.9357451258674 0.022 0.209 0.805741437998867 0.0320941211309088 0.258264138455181 2.86454935927052 P11137 MAP2 P11137.S1790.p_MAP2 P11137_S1790s _1_1_1790_1790 P11137 P11137|P11137-3|P11137-4|P11137-2 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3569.3569.3 9.05 5.76 4.932 3 1 1 0 390.2061 1088.6374 S1790s TMT10 1786 (R) SSVAsPRR (L) S(0.0)S(0.0)VAS(0.99)PRR s:Phosphorylated S MAP2 199979.2 2 22 117.1 560.28 HUMAN 1 0.938 14.9357 PGSAGSLSPQDPVAL-p Q9P260-2;S56-p PGSAGSLSPQDPVAL 0.101218422745456 0.568089684240398 0.319666666666667 0.0956666666666667 21.0304111481091 3.31020751337248 0.319666666666667 0.0956666666666667 0.00788785439489519 0.466637083059238 4.10366071811227 0.782627913981639 Q9P260 KIAA1468 Q9P260.2.S56.p_KIAA1468 Q9P260-2_S54sS56s_2_2_54_56 Q9P260-2 Q9P260-2|A0A075B785 Isoform 2 of LisH domain and HEAT repeat-containing protein KIAA1468 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29419.29419.4 15.13 15.13 2.133 9 2 2 0 1236.8604 4784.4652 S54s S56s TMT10 41 (R) LGAGSGLDPGSAGsLsPQDPVALGSSARPGLPGEASAAAVALGGTGETPAR (L) LGAGS(0.0)GLDPGS(0.0)AGS(0.99)LS(0.99)PQDPVALGS(0.0)S(0.0)ARPGLPGEAS(0.0)AAAVALGGT(0.0)GET(0.0)PAR s:Phosphorylated S KIAA1468 139711.8 2 12 724.1 236.86 HUMAN 1 21.0304 3.3102 PGSAKVQSGFICTNR-p Q9P2H0;S767-p PGSAKVQSGFICTNR 0.016158495038515 0.000952253650599092 -1.53566666666667 -1.57633333333333 42.0297327899165 55.8111806288244 -1.53566666666667 -1.57633333333333 6.26652419777493e-05 2.62350524697047e-06 -11.1104786632217 -20.1587159872449 Q9P2H0 CEP126 Q9P2H0.S767.p_CEP126 Q9P2H0_S767sT772t_2_2_767_772 Q9P2H0 Q9P2H0 Centrosomal protein of 126 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30290.30290.4 7.62 7.62 2.422 4 2 2 0 749.6237 2834.5711 S767s T772t N773n Hydrogen 765 (K) VQsGFICtnRKGAVIQPQSASK (V) VQS(0.99)GFICT(0.99)N(1.0)RKGAVIQPQS(0.0)AS(0.0)K C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated CEP126 127009 1 1 7121.1 7.62 HUMAN 1 -42.0297 -55.8112 PGSDRSPSPKHPCRS-p Q5VT52-5;S904-p PGSDRSPSPKHPCRS 0.184447384996334 0.183313099831904 0.331333333333333 -0.332666666666667 14.4354202739409 9.69218092138429 0.331333333333333 -0.332666666666667 0.0360128898440289 0.107345021634585 2.77321910815663 -1.92752526153234 Q5VT52 RPRD2 Q5VT52.5.S904.p_RPRD2 Q5VT52-5_S904s _1_1_904_904 Q5VT52-5 Q5VT52-5 Isoform 5 of Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.3676.3676.3 7.75 7.75 1.484 2 1 1 0 535.2792 1523.8517 S904s TMT10 902 (R) SPsPKHPCR (S) S(0.0)PS(0.99)PKHPCR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RPRD2 100726.5 1 34 172.2 488.65 HUMAN 1 14.4354 -9.6922 PGSDRSPSPSKNDSF-p Q5VT52;S930-p PGSDRSPSPSKNDSF 0.40198481120648 0.00171684026921227 0.307 0.859666666666667 7.30312289774209 43.851874446047 0.307 0.859666666666667 0.18607486399257 4.1191969323876e-05 1.51397587776859 12.007349782542 Q5VT52 RPRD2 Q5VT52.S930.p_RPRD2 Q5VT52_S930s _1_1_930_930 Q5VT52 Q5VT52 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4723.4723.3 10.84 10.84 1.578 4 1 1 0 651.6559 1872.9816 S930s TMT10 920 (R) GNEPGSDRSPsPSK (N) GNEPGS(0.0)DRS(0.0)PS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S RPRD2 156473.2 1 23 172.1 488.65 HUMAN 1 7.3031 43.8519 PGSGAPGSQEEEEEP-p Q86U42;S95-p PGSGAPGSQEEEEEP 0.631521203791749 0.376054731124567 0.162 -0.199333333333333 3.71596694518174 5.639630628556 0.162 -0.199333333333333 0.425014068010911 0.27292098947444 0.862431532098779 -1.21981598777515 Q86U42 PABPN1 Q86U42.S95.p_PABPN1 Q86U42_S95s _1_1_95_95 Q86U42 Q86U42|Q86U42-2 Polyadenylate-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26308.26308.5 23.35 22.11 3.798 2 1 1 0 923.828 4535.1423 S95s Hydrogen 79 (R) APPGAPGPGPGSGAPGsQEEEEEPGLVEGDPGDGAIEDPELEAIK (A) APPGAPGPGPGS(0.0)GAPGS(0.99)QEEEEEPGLVEGDPGDGAIEDPELEAIK K:TMT10-Lys-Only,s:Phosphorylated S PABPN1 32862.6 3 3 1523.1 134.21 HUMAN 1 3.716 -5.6396 PGSGVRVSPKSPPTD-p Q9BY89;S1363-p PGSGVRVSPKSPPTD 0.251085974261154 0.961729514589076 0.170333333333333 0.0173333333333333 11.4537888103654 0.242557908834584 0.171809666959121 0.0173333333333333 0.0715518914975285 0.945680010433672 2.23580930058565 0.0713461833439129 Q9BY89 KIAA1671 Q9BY89.S1363.p_KIAA1671 Q9BY89_S1363s _1_1_1363_1363 Q9BY89 Q9BY89 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8956.8956.3 8.67 7.32 1.213 2 1 1 0 589.3126 1685.9587 S1363s TMT10 1354 (R) EDPGSGVRVsPK (S) EDPGS(0.0)GVRVS(0.99)PK K:TMT10,s:Phosphorylated S KIAA1671 197734.4 1 19 105.1 590.35 HUMAN 1 11.4538 0.2426 PGSHGRNSPGLGSLV-p Q8ND24;S511-p PGSHGRNSPGLGSLV 0.530763566971729 0.0835659480472171 0.0876666666666667 0.2 5.08975730431187 14.2713632070461 0.0876666666666667 0.2 0.309759239635328 0.037399317711922 1.12048145113279 2.74119555911055 Q8ND24 RNF214 Q8ND24.S511.p_RNF214 Q8ND24_S511s _1_1_511_511 Q8ND24 Q8ND24|Q8ND24-2|E9PN76 RING finger protein 214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25456.25456.5 18.57 18.57 2.297 4 1 1 0 712.9854 3480.919 S511s TMT10 510 (R) NsPGLGSLVSPHGPHMPPAASIPPPPGLGGVK (A) NS(0.99)PGLGS(0.0)LVS(0.0)PHGPHMPPAAS(0.0)IPPPPGLGGVK K:TMT10,s:Phosphorylated S RNF214 78407.7 7 10 887.1 205.7 HUMAN 1 5.0898 14.2714 PGSHLYASTGDLLDL-p Q9Y3M8;S470-p PGSHLYASTGDLLDL 0.134264480831341 0.129017493571011 -0.337666666666667 0.609666666666667 17.9017276554043 11.7227468946999 -0.337666666666667 0.609666666666667 0.0162116505767823 0.0672551135906817 -3.44240413272165 2.2821441151494 Q9Y3M8 STARD13 Q9Y3M8.S470.p_STARD13 Q9Y3M8_S470s _1_1_470_470 Q9Y3M8 Q9Y3M8|Q9Y3M8-2|Q9Y3M8-4|Q9Y3M8-3|Q9Y3M8-5 StAR-related lipid transfer protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29942.29942.3 25.79 25.79 1.124 6 1 1 0 1048.8677 3064.6243 S470s TMT10 456 (R) VSIYDNVPGSHLYAsTGDLLDLEK (D) VS(0.0)IY(0.0)DNVPGS(0.0)HLY(0.0)AS(0.99)T(0.0)GDLLDLEK K:TMT10,s:Phosphorylated S STARD13 126277.4 4 9 564.1 271.22 HUMAN 1 -17.9017 11.7227 PGSIRRYSLGQVSKE-p Q14D04;S430-p PGSIRRYSLGQVSKE 0.431012713610678 0.391444499941309 -0.195 0.0976666666666667 6.73087191529858 5.41542302135294 -0.195 0.0976666666666667 0.212281822966692 0.287380765885581 -1.41381654975481 1.17941566842875 Q14D04 VEPH1 Q14D04.S430.p_VEPH1 Q14D04_S430s _1_1_430_430 Q14D04 Q14D04|Q14D04-2 Ventricular zone-expressed PH domain-containing protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9980.9980.4 11.09 11.09 5.692 3 1 1 0 498.2677 1910.086 S430s TMT10 428 (R) RYsLGQVSKEER (K) RY(0.0)S(0.99)LGQVS(0.0)KEER K:TMT10,s:Phosphorylated S VEPH1 95542.4 8 6 341.1 353.64 HUMAN 1 -6.7309 5.4154 PGSKSGSSPLGVVTK-p Q92618;S852-p PGSKSGSSPLGVVTK 0.757083887237467 0.409215473857338 -0.044 -0.084 2.31479682724624 5.16416135423497 -0.044 -0.084 0.586840822713862 0.304497593431654 -0.577440130128414 -1.13382259155175 Q92618 ZNF516 Q92618.S852.p_ZNF516 Q92618_S852s _1_1_852_852 Q92618 Q92618 Zinc finger protein 516 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16795.16795.2 12.38 8.96 1.338 4 1 1 0 785.436 1489.899 S852s TMT10 849 (K) SGSsPLGVVTK (A) S(0.0)GS(0.0)S(0.99)PLGVVT(0.0)K K:TMT10,s:Phosphorylated S ZNF516 126397.9 3 4 3011.1 63.33 HUMAN 1 -2.3148 -5.1642 PGSMIVSSDDTVDST-p Q9UK59;S479-p PGSMIVSSDDTVDST 0.408116983785071 0.135511913825413 -0.178333333333333 -0.171333333333333 7.1808133096718 11.4410042757151 -0.178333333333333 -0.171333333333333 0.191389747305998 0.0717628325535139 -1.49262799080865 -2.23250473701889 Q9UK59 DBR1 Q9UK59.S479.p_DBR1 Q9UK59_S478sS479s_2_2_478_479 Q9UK59 Q9UK59|Q9UK59-2 Lariat debranching enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25959.25959.5 9.59 9.59 1.111 9 2 2 0 945.6633 4564.3543 S478s S479s TMT10 470 (R) ILPGSMIVssDDTVDSTIDREGKPGGTVESGNGEDLTK (V) ILPGS(0.0)MIVS(0.99)S(0.99)DDT(0.0)VDS(0.0)T(0.0)IDREGKPGGT(0.0)VES(0.0)GNGEDLT(0.0)K K:TMT10,s:Phosphorylated S DBR1 62181.4 2 2 4495.1 30.73 HUMAN 1 -7.1808 -11.441 PGSNLRTT_______-p Q9H4A3-7;T2833-p PGSNLRTT_______ 0.168864357933038 0.0663476458173452 0.23 0.206 15.404680655548 15.6712055971564 0.23 0.206 0.0288092488151405 0.0270943938980873 2.95469958579551 3.0032416041108 Q9H4A3 WNK1 Q9H4A3.7.T2833.p_WNK1 Q9H4A3-7_T2833t _1_1_2833_2833 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2|F5GWT4|Q9H4A3-4 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9895.9895.2 10.25 10.25 1.195 5 1 1 0 826.9147 1572.8543 T2833t TMT10 2821 (K) SISNPPGSNLRTt (-) S(0.0)IS(0.0)NPPGS(0.0)NLRT(0.0)T(0.99) t:Phosphorylated T WNK1 301202.7 3 26 162.1 495.27 HUMAN 1 15.4047 15.6712 PGSPLGHSPTASPPP-p M0QXA7;S468-p PGSPLGHSPTASPPP 0.95379447453084 0.0496442233233215 -0.01 -0.287 0.403254005414602 17.4430069031499 -0.01 -0.287 0.911327759827611 0.0180176982647088 -0.116672230848252 -3.34777013984246 M0QXA7 WIZ M0QXA7.S468.p_WIZ M0QXA7_S468s _1_1_468_468 M0QXA7 M0QXA7|O95785-3|O95785-4|B9EGQ5|O95785-2 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14014.14014.4 17.13 17.13 1.643 5 1 1 0 700.1363 2717.5503 S468s TMT10 456 (K) KLPPPPGSPLGHsPTASPPPTAR (K) KLPPPPGS(0.0)PLGHS(0.99)PT(0.0)AS(0.0)PPPT(0.0)AR K:TMT10,s:Phosphorylated S WIZ 104190.1 1 13 195.1 461.51 HUMAN 1 -0.4033 -17.443 PGSPRAVTPVPTKTE-p Q6PKG0;T526-p PGSPRAVTPVPTKTE 0.286918447318723 0.0453960353890061 -0.247333333333333 -0.333333333333333 10.2277358493458 17.9717744295331 -0.247333333333333 -0.333333333333333 0.0948913040649637 0.0159522724011219 -2.02130521218291 -3.45373334518665 Q6PKG0 LARP1 Q6PKG0.T526.p_LARP1 Q6PKG0_T526t _1_1_526_526 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15200.15620.3 19.23 16 18.538 4 1 1 0 751.0837 2171.2688 T526t Hydrogen 524 (R) AVtPVPTKTEEVSNLK (T) AVT(0.99)PVPT(0.0)KT(0.0)EEVS(0.0)NLK K:TMT10-Lys-Only,t:Phosphorylated T LARP1 123907.4 21 46 28.1 931.95 HUMAN 1 -10.2277 -17.9718 PGSSGLGSPLGRSRH-p Q2LD37;S4124-p PGSSGLGSPLGRSRH 0.370580480392857 0.433304091603173 0.137666666666667 -0.115666666666667 7.99407597818884 4.83966979248808 0.137666666666667 -0.115666666666667 0.158705655134957 0.328120240160278 1.63413292891017 -1.07438190924315 Q2LD37 KIAA1109 Q2LD37.S4124.p_KIAA1109 Q2LD37_S4124s _1_1_4124_4124 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18181.18181.3 15.5 15.5 2.244 4 1 1 0 555.6246 1584.8907 S4124s TMT10 4114 (K) TGIPGSSGLGsPLGR (S) T(0.0)GIPGS(0.0)S(0.0)GLGS(0.99)PLGR s:Phosphorylated S KIAA1109 559693.9 3 27 143.1 520.8 HUMAN 1 7.9941 -4.8397 PGSSSRYSLGPSLRR-p Q14573;S1843-p PGSSSRYSLGPSLRR 0.232365737282587 0.0395317449326969 0.204 0.276666666666667 12.1858149569039 18.8190764468702 0.204 0.276666666666667 0.0604530900016542 0.0131247897583014 2.36533696582023 3.62682855141002 Q14573 ITPR3 Q14573.S1843.p_ITPR3 Q14573_S1843s _1_1_1843_1843 Q14573 Q14573 Inositol 1,4,5-trisphosphate receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23451.23451.3 17.13 12.33 1.239 8 1 1 0 793.0758 2297.2451 S1843s TMT10 1830 (R) VASFSIPGSSSRYsLGPSLR (R) VAS(0.0)FS(0.0)IPGS(0.0)S(0.0)S(0.0)RY(0.0)S(0.99)LGPS(0.0)LR s:Phosphorylated S ITPR3 307010.8 3 7 1377.1 148.68 HUMAN 1 12.1858 18.8191 PGTAINRSPSPISNQ-p F6SS63;S383-p PGTAINRSPSPISNQ 0.275481256258864 0.515311703470183 0.172 0.066 10.5974029353892 3.86496913085448 0.172 0.0643930173807792 0.0871484578654819 0.41067955892688 2.08571836033507 0.891081511312344 F6SS63 NotFound F6SS63.S383.p_NotFound F6SS63_S383sS385s_2_2_383_385 F6SS63 F6SS63 TAK1-binding protein 3, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16040.16040.5 9.3 9.3 1.111 7 2 2 0 775.8059 3715.0655 S383s S385s TMT10 365 (K) KIEITVEPSQRPGTAINRsPsPISNQPSPR (N) KIEIT(0.0)VEPS(0.0)QRPGT(0.0)AINRS(0.99)PS(0.99)PIS(0.0)NQPS(0.0)PR K:TMT10,s:Phosphorylated S TAB3 67485.4 2 9 1606.1 128.05 HUMAN 1 10.5974 3.865 PGTALVGSQKEPSEV-p P17096;S44-p PGTALVGSQKEPSEV 0.563810063757983 0.75292225678543 0.079 0.039 4.58457374956228 1.7021596123416 0.079 0.039 0.347970658524401 0.675746863782703 1.02734737890856 0.441735430462079 P17096 HMGA1 P17096.S44.p_HMGA1 P17096_S44s _1_1_44_44 P17096 P17096-3 High mobility group protein HMG-I/HMG-Y HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17316.17316.5 22.24 22.24 2.813 5 1 1 0 711.8074 3475.0342 S44s TMT10 31 (R) KQPPVSPGTALVGsQKEPSEVPTPK (R) KQPPVS(0.0)PGT(0.0)ALVGS(0.99)QKEPS(0.0)EVPT(0.0)PK K:TMT10,s:Phosphorylated S HMGA1 11675.8 4 4 1152.1 172.09 HUMAN 1 4.5846 1.7022 PGTAPAGTPGAPPLA-p Q13263;T541-p PGTAPAGTPGAPPLA 0.0834753583106526 0.0833872115874586 -0.405666666666667 0.324 23.0450341598254 14.2821484989346 -0.405666666666667 0.324 0.00496017025913831 0.0373065552816466 -4.56508150176882 2.74318420822612 Q13263 TRIM28 Q13263.T541.p_TRIM28 Q13263_T541t _1_1_541_541 Q13263 Q13263|Q13263-2 Transcription intermediary factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26014.26014.3 24.5 24.5 2.263 3 1 1 0 1037.5544 3030.681 T541t TMT10 525 (R) GAAAAATGQPGTAPAGtPGAPPLAGMAIVK (E) GAAAAAT(0.0)GQPGT(0.0)APAGT(0.99)PGAPPLAGMAIVK K:TMT10,t:Phosphorylated T TRIM28 90316.8 2 16 118.1 555.36 HUMAN 1 -23.045 14.2821 PGTRVRKTPTSSGKP-p Q02880;T1317-p PGTRVRKTPTSSGKP 0.809310350541982 0.74354775437885 0.0763333333333333 -0.0693333333333333 1.76528491139716 1.77534106982454 0.0763333333333333 -0.0693333333333333 0.6659958283587 0.664455488358943 0.456171620525124 -0.458403082595323 Q02880 TOP2B Q02880.T1317.p_TOP2B Q02880_T1317t _1_1_1317_1317 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6745.6745.3 9.22 3.97 6.136 5 1 1 0 610.012 1748.0521 T1317t TMT10 1317 (K) tPTSSGKPSAK (K) T(0.99)PT(0.0)S(0.0)S(0.0)GKPS(0.0)AK K:TMT10,t:Phosphorylated T TOP2B 184233.7 1 30 71.1 658.36 HUMAN 1 1.7653 -1.7753 PGVDDAESECGLDNF-p Q15126;S154-p PGVDDAESECGLDNF 0.415378196858476 0.106945778360697 0.117333333333333 0.250333333333333 7.03964454556397 12.8264444007844 0.117333333333333 0.250333333333333 0.197713145459862 0.0521621591571587 1.46795101162995 2.47850146087844 Q15126 PMVK Q15126.S154.p_PMVK Q15126_S154s_1_1_154_154 Q15126 Q15126 Phosphomevalonate kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36132.36132.4 24.48 24.48 6.859 2 1 1 0 1077.4727 4225.9035 S154s N160n TMT10 142 (R) GWVFTPGVDDAEsECGLDnFGDFDWVIENHGVEQR (L) GWVFT(0.0)PGVDDAES(0.99)ECGLDN(0.99)FGDFDWVIEN(0.0)HGVEQR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated PMVK 22165.7 1 3 3707.1 44.82 HUMAN 1 7.0396 12.8264 PGVGTADSPAAPTDS-p Q7Z2Z1;S1413-p PGVGTADSPAAPTDS 0.567858405895855 0.00383431602061286 -0.116333333333333 -0.806666666666667 4.52402791283797 35.7903775028356 -0.116333333333333 -0.806666666666667 0.35285575795784 0.000263610223731843 -1.01606339990934 -8.38977939009155 Q7Z2Z1 TICRR Q7Z2Z1.S1413.p_TICRR Q7Z2Z1_S1413s _1_1_1413_1413 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14564.14564.5 18.17 18.17 1.111 7 1 1 0 757.1569 3701.7965 S1413s TMT10 1394 (R) SIVECQPDASATPGVGTADsPAAPTDSRDDQK (G) S(0.0)IVECQPDAS(0.0)AT(0.0)PGVGT(0.0)ADS(0.99)PAAPT(0.0)DS(0.0)RDDQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TICRR 212850 1 18 238.1 417.32 HUMAN 1 -4.524 -35.7904 PGVPAQQSPSM____-p O60341;S849-p PGVPAQQSPSM____ 0.729035669255208 0.749569447738948 0.0936666666666666 0.0356666666666667 2.60631147665015 1.73074290890974 0.0936666666666667 0.0356666666666667 0.548742821963085 0.671314007392155 0.639249042786392 0.448261957827712 O60341 KDM1A O60341.S849.p_KDM1A O60341_S849s_1_1_849_849 O60341 O60341-2 Lysine-specific histone demethylase 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9664.9664.2 13.72 13.72 2.664 3 1 1 0 862.4005 1627.8311 S849s M852m TMT10 839 (R) QATPGVPAQQsPSm (-) QAT(0.0)PGVPAQQS(0.99)PS(0.0)M(1.0) s:Phosphorylated S,m:Oxidized methionine KDM1A 93414.4 2 10 232.1 420.78 HUMAN 1 2.6063 1.7307 PGVPVEGSPGRNPGV-p Q8NE01;S700-p PGVPVEGSPGRNPGV 0.419598745385739 0.18845697089808 0.113333333333333 0.145333333333333 6.9650577126344 9.53021110607637 0.113333333333333 0.145333333333333 0.201138046913992 0.11142403701981 1.45489535365816 1.89946661585857 Q8NE01 CNNM3 Q8NE01.S700.p_CNNM3 Q8NE01_S700s _1_1_700_700 Q8NE01 Q8NE01|Q8NE01-2 Metal transporter CNNM3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7529.7529.4 27.78 25.84 27.332 7 1 1 0 696.8461 2704.3964 S700s TMT10 682 (K) TTTAAGSSHSRPGVPVEGsPGRNPGV (-) T(0.0)T(0.0)T(0.0)AAGS(0.0)S(0.0)HS(0.0)RPGVPVEGS(0.99)PGRNPGV s:Phosphorylated S CNNM3 76574.2 3 2 3551.1 48.42 HUMAN 1 6.9651 9.5302 PGYSSFPSPTGLEPS-p Q8WZ73;S39-p PGYSSFPSPTGLEPS 0.635993227924701 0.0559529472187686 -0.0716666666666667 -0.253333333333333 3.66430610377563 16.6824189759391 -0.0716666666666667 -0.253333333333333 0.430099947579571 0.0214663448758476 -0.852391680162995 -3.1979634266888 Q8WZ73 RFFL Q8WZ73.S39.p_RFFL Q8WZ73_S39s_1_1_39_39 Q8WZ73 Q8WZ73|Q8WZ73-2|Q8WZ73-3|J3QR17 E3 ubiquitin-protein ligase rififylin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21383.21383.3 14.53 14.53 1.121 8 1 1 0 1020.4657 2963.432 M26m S39s TMT10 26 (R) mQAYSNPGYSSFPsPTGLEPSCK (S) M(1.0)QAY(0.0)S(0.0)NPGY(0.0)S(0.0)S(0.0)FPS(0.99)PT(0.0)GLEPS(0.0)CK C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,s:Phosphorylated S RFFL 41768.5 2 1 2231.1 92.49 HUMAN 1 -3.6643 -16.6824 PGYTRKLSAEELERK-p Q9NXE8;S337-p PGYTRKLSAEELERK 0.514696765789748 0.0329898345123779 -0.116 -0.291333333333333 5.32549610377902 19.9820060442368 -0.116 -0.291333333333333 0.293393433528369 0.0100415185660465 -1.16338653963637 -3.87147120111958 Q9NXE8 CWC25 Q9NXE8.S337.p_CWC25 Q9NXE8_S337s _1_1_337_337 Q9NXE8 Q9NXE8 Pre-mRNA-splicing factor CWC25 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11776.11776.3 9.53 9.53 99 1 1 1 0 538.2956 1532.9048 S337s TMT10 335 (R) KLsAEELER (K) KLS(1.0)AEELER K:TMT10,s:Phosphorylated S CWC25 49703.7 1 16 1099.2 177.93 HUMAN 1 -5.3255 -19.982 PHAFKTESGEETDLI-p O43493;S298-p PHAFKTESGEETDLI 0.230031573434587 0.206883100725143 -0.217333333333333 -0.192 12.2626067943987 9.00152433743733 -0.217333333333333 -0.192 0.0593935549751005 0.125848361700421 -2.37900217268271 -1.80797623663775 O43493 TGOLN2 O43493.S298.p_TGOLN2 O43493_S298s _1_1_298_298 O43493 O43493|F8W8W7|J3KQ45|O43493-3|O43493-5|O43493-2 Trans-Golgi network integral membrane protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20281.20302.5 19.02 14.33 1.101 5 1 1 0 707.9707 3455.8513 S298s TMT10 289 (K) LSPHAFKTEsGEETDLISPPQEEVK (S) LS(0.0)PHAFKT(0.0)ES(0.99)GEET(0.0)DLIS(0.0)PPQEEVK K:TMT10,s:Phosphorylated S TGOLN2 51111.9 4 4 1252.1 161.84 HUMAN 1 -12.2626 -9.0015 PHCSLRRSTDISTFR-p Q8N2G8;S87-p PHCSLRRSTDISTFR 0.309869250687191 0.883929070618543 -0.150666666666667 -0.021 9.51445212296656 0.753466978287268 -0.150666666666667 -0.021 0.111829089182714 0.840723722882901 -1.89746303019101 -0.210821000778532 Q8N2G8 GHDC Q8N2G8.S87.p_GHDC Q8N2G8_S87s _1_1_87_87 Q8N2G8 Q8N2G8|Q8N2G8-3|K7ESN3|Q8N2G8-2 GH3 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12240.12240.2 10.38 6.58 2.074 4 1 1 0 618.2972 1155.6207 S87s TMT10 87 (R) sTDISTFR (N) S(0.99)T(0.0)DIS(0.0)T(0.0)FR s:Phosphorylated S GHDC 58092.4 2 1 3429.1 51.3 HUMAN 1 -9.5145 -0.7535 PHDFGLRTPPLIRTQ-p Q9UGN5;T317-p PHDFGLRTPPLIRTQ 0.886365307105859 0.26460169192212 -0.0423333333333333 0.152666666666667 1.02215796553926 7.60394012957125 -0.0423333333333333 0.152666666666667 0.79028584534609 0.173622492677018 -0.279427321637888 1.56589863788412 Q9UGN5 PARP2 Q9UGN5.T317.p_PARP2 Q9UGN5_T317t _1_1_317_317 Q9UGN5 Q9UGN5|Q9UGN5-2|G3V167 Poly [ADP-ribose] polymerase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22010.22010.4 15.38 15.38 99 1 1 1 0 486.0223 1861.101 T317t TMT10 309 (R) IPHDFGLRtPPLIR (T) IPHDFGLRT(1.0)PPLIR t:Phosphorylated T PARP2 66775.1 1 2 2668.1 74.43 HUMAN 1 -1.0222 7.6039 PHGPRSASVSSISLT-p Q07889;S1134-p PHGPRSASVSSISLT 0.0690182417121105 0.0117297467150433 -0.389666666666667 -0.412666666666667 25.0280870218537 26.9966293614113 -0.389666666666667 -0.412666666666667 0.00314189232827268 0.00199681147548693 -5.05089387528294 -5.56022034842526 Q07889 SOS1 Q07889.S1134.p_SOS1 Q07889_S1134s _1_1_1134_1134 Q07889 Q07889|G5E9C8 Son of sevenless homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17937.17937.2 12.02 12.02 2.303 6 1 1 0 809.4485 1537.9201 S1134s TMT10 1132 (R) SAsVSSISLTK (G) S(0.0)AS(0.99)VS(0.0)S(0.0)IS(0.0)LT(0.0)K K:TMT10,s:Phosphorylated S SOS1 153431.2 2 2 2313.1 88.35 HUMAN 1 -25.0281 -26.9966 PHGPVVGSTRRLYEK-p P50402;S29-p PHGPVVGSTRRLYEK 0.467782337576751 0.0147628369933954 -0.143333333333333 -0.515333333333333 6.09205222979137 25.3560432333643 -0.143333333333333 -0.515333333333333 0.245920524839575 0.00291337022026222 -1.300945363841 -5.12800095096524 P50402 EMD P50402.S29.p_EMD P50402_S29s _1_1_29_29 P50402 P50402 Emerin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13156.13156.3 15.16 15.16 1.107 3 1 1 0 569.2926 1625.8961 S29s TMT10 19 (R) YNIPHGPVVGsTR (R) Y(0.0)NIPHGPVVGS(0.99)T(0.0)R s:Phosphorylated S EMD 29050.4 2 2 483.1 297.25 HUMAN 1 -6.0921 -25.356 PHHGLADSSADLSCD-p O95049-3;S812-p PHHGLADSSADLSCD 0.871044768133441 0.113229582632421 0.0313333333333333 0.248666666666667 1.17342881453395 12.4770313206732 0.0313333333333333 0.248666666666667 0.763232962743219 0.0565323277223837 0.316832778675161 2.41598153411082 O95049 TJP3 O95049.3.S812.p_TJP3 O95049-3_S812s_1_1_812_812 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23848.23848.4 13.7 13.7 1.114 7 1 1 0 1226.3107 4821.2496 N801n S812s TMT10 781 (R) EQQTRPIWTAEDQLDGSLEDnLDLPHHGLADsSADLSCDSR (V) EQQT(0.0)RPIWT(0.0)AEDQLDGS(0.0)LEDN(1.0)LDLPHHGLADS(0.99)S(0.0)ADLS(0.0)CDS(0.0)R C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S TJP3 103593.6 1 19 125.1 544.41 HUMAN 1 1.1734 12.477 PHKDLWASKNENEEI-p Q9UHB6-4;S468-p PHKDLWASKNENEEI 0.158297715435374 0.346018264337485 0.228333333333333 0.116666666666667 16.0567184870112 6.1083024561173 0.228333333333333 0.116666666666667 0.0247929469593661 0.245002070391525 3.07908841044642 1.30351851384779 Q9UHB6 LIMA1 Q9UHB6.4.S468.p_LIMA1 Q9UHB6-4_S468s _1_1_468_468 Q9UHB6-4 Q9UHB6-4 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21173.21173.4 16.96 7.91 99 1 1 1 0 802.1677 3125.6744 S468s TMT10 464 (K) DLWAsKNENEEILERPAQLANAR (E) DLWAS(1.0)KNENEEILERPAQLANAR K:TMT10,s:Phosphorylated S LIMA1 85678.4 1 19 42.1 822.82 HUMAN 1 16.0567 6.1083 PHKLLSRSPETCASP-p Q5T1R4;S2127-p PHKLLSRSPETCASP 0.638067226462082 0.100788768328285 -0.066 0.199 3.64109046673643 13.1651344335163 -0.066 0.199 0.432405245096599 0.048248804467116 -0.84787031592393 2.53945176881667 Q5T1R4 HIVEP3 Q5T1R4.S2127.p_HIVEP3 Q5T1R4_S2127s _1_1_2127_2127 Q5T1R4 Q5T1R4 Transcription factor HIVEP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18494.18494.3 18.85 18.85 1.126 4 1 1 0 766.7293 2218.2054 S2127s TMT10 2123 (K) LLSRsPETCASPWQK (A) LLS(0.0)RS(0.99)PET(0.0)CAS(0.0)PWQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HIVEP3 261285.6 1 39 465.1 303.46 HUMAN 1 -3.6411 13.1651 PHKMKESSPLSSRKI-p Q14693-7;S379-p PHKMKESSPLSSRKI 0.444304181044895 0.131316085242144 -0.102666666666667 -0.231333333333333 6.49284519160223 11.623203737976 -0.102666666666667 -0.231333333333333 0.224241237179325 0.0688144473187464 -1.37191247420196 -2.26458572278261 Q14693 LPIN1 Q14693.7.S379.p_LPIN1 Q14693-7_S379s _1_1_379_379 Q14693-7 A0A0A0MS66|Q14693-6|Q14693-7|Q14693-5|Q14693-3|Q14693-4|Q14693-2 Isoform 7 of Phosphatidate phosphatase LPIN1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7817.7817.3 9.34 9.34 1.335 4 1 1 0 553.9561 1579.8878 S379s TMT10 375 (K) MKESsPLSSR (K) MKES(0.0)S(0.99)PLS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S LPIN1 108658.1 10 3 2939.1 65.31 HUMAN 1 -6.4928 -11.6232 PHLDGPPSPRSPVIG-p P29590-8;S527-p PHLDGPPSPRSPVIG 0.461535694452753 0.0561151407679008 0.101333333333333 0.441333333333333 6.19158107255738 16.6673634642233 0.101333333333333 0.441333333333333 0.2403487638035 0.0215408905257446 1.31862126299762 3.19502798544078 P29590 PML P29590.8.S527.p_PML P29590-8_S527s _1_1_527_527 P29590-8 P29590|P29590-11|P29590-8|P29590-3|P29590-13|P29590-9|P29590-5|P29590-2|P29590-12|H3BT57|P29590-4 Isoform PML-2 of Protein PML HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12096.12304.3 18.09 18.09 11.717 2 1 1 0 579.2959 1655.9067 S527s TMT10 516 (K) AVSPPHLDGPPsPR (S) AVS(0.0)PPHLDGPPS(0.99)PR s:Phosphorylated S PML 92374.1 3 12 777.1 226.8 HUMAN 1 6.1916 16.6674 PHLIRLFSRDAPGRE-p P02686;S96-p PHLIRLFSRDAPGRE 0.177812835041029 0.685086262726147 -0.499666666666667 0.053 14.8619130516746 2.24896788134179 -0.499666666666667 0.053 0.0326444003079652 0.59580372190449 -2.85259274969904 0.563189634135982 P02686 MBP P02686.S96.p_MBP P02686_S96s _1_1_96_96 P02686 P02686|J3QQK6|P02686-2 Myelin basic protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15395.15395.4 11.57 11.57 5.077 2 1 1 0 573.5454 2211.1922 S96s TMT10 94 (R) LFsRDAPGREDNTFK (D) LFS(0.99)RDAPGREDNT(0.0)FK K:TMT10,s:Phosphorylated S MBP 33116.5 1 2 4300.1 34.03 HUMAN 1 -14.8619 2.249 PHLRKSPSLESLSRP-p Q5M775;S914-p PHLRKSPSLESLSRP 0.911605742223265 0.0399777024253515 -0.0193333333333333 -0.272333333333333 0.78477618959699 18.7477490988116 -0.0193333333333334 -0.272333333333333 0.834684562011666 0.0133421276099451 -0.218984901498731 -3.61209496411821 Q5M775 SPECC1 Q5M775.S914.p_SPECC1 Q5M775_S914s _1_1_914_914 Q5M775 Q5M775|Q5M775-4 Cytospin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21853.21853.3 11.8 5.16 1.127 6 1 1 0 771.3863 2232.1822 S914s TMT10 912 (K) SPsLESLSRPPSLGFGDTR (L) S(0.0)PS(0.99)LES(0.0)LS(0.0)RPPS(0.0)LGFGDT(0.0)R s:Phosphorylated S SPECC1 119267.5 5 21 330.1 358.68 HUMAN 1 -0.7848 -18.7477 PHLRRSASNGHVPGT-p A0A087WX45;S130-p PHLRRSASNGHVPGT 0.868454829122466 0.101486792452466 0.024 0.184666666666667 1.19595958120261 13.1298680397706 0.024 0.184666666666667 0.759283639093381 0.0486421985382268 0.322335399577404 2.53308855569844 A0A087WX45 IQCE A0A087WX45.S130.p_IQCE A0A087WX45_S130s _1_1_130_130 A0A087WX45 A0A087WX45|Q6IPM2|A0A087WX19|Q6IPM2-4|Q6IPM2-3|Q6IPM2-2 IQ domain-containing protein E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7618.7618.2 12.69 12.69 2.243 4 1 1 0 875.9285 1670.8812 S130s TMT10 128 (R) SAsNGHVPGTPVYR (E) S(0.0)AS(0.99)NGHVPGT(0.0)PVY(0.0)R s:Phosphorylated S IQCE 78569.7 6 2 1617.1 127.24 HUMAN 1 1.196 13.1299 PHNAAGPSPHTLRRA-p Q68EM7;S625-p PHNAAGPSPHTLRRA 0.120014369208718 0.282350333468901 0.381333333333333 0.216 19.1591591237453 7.24147770849893 0.381333333333333 0.216 0.0121362380824055 0.188734905995984 3.70077531689409 1.50279027364021 Q68EM7 ARHGAP17 Q68EM7.S625.p_ARHGAP17 Q68EM7_S625s _1_1_625_625 Q68EM7 Q68EM7|Q68EM7-5|Q68EM7-6|Q68EM7-2|Q68EM7-3 Rho GTPase-activating protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8509.8509.5 24.99 22.19 1.439 6 1 1 0 834.5995 4089.0019 S625s TMT10 593 (R) NNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPsPHTLR (R) NNS(0.0)QIAS(0.0)GQNQPQAAAGS(0.0)HQLS(0.0)MGQPHNAAGPS(0.99)PHT(0.0)LR s:Phosphorylated S ARHGAP17 95834.3 4 2 2036.1 101.4 HUMAN 1 19.1592 7.2415 PHPAHDRSPVETCSI-p Q13480-2;S355-p PHPAHDRSPVETCSI 0.356108068197239 0.019429497948105 -0.17 -0.393666666666667 8.33376023066449 23.5078111441887 -0.17 -0.393666666666667 0.146765499482543 0.0044588091695137 -1.69301526033422 -4.6701295523133 Q13480 GAB1 Q13480.2.S355.p_GAB1 Q13480-2_S355s _1_1_355_355 Q13480-2 Q13480-2 Isoform 2 of GRB2-associated-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15666.15666.5 14.76 9.04 1.275 4 1 1 0 807.0322 3951.1427 S355s TMT10 334 (K) LDTIPDIPPPRPPKPHPAHDRsPVETCSIPR (T) LDT(0.0)IPDIPPPRPPKPHPAHDRS(0.99)PVET(0.0)CS(0.0)IPR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GAB1 80631.3 1 7 368.1 340.82 HUMAN 1 -8.3338 -23.5078 PHPEDDHSQVEGPES-p Q6P996;S779-p PHPEDDHSQVEGPES 0.51189360670234 0.0355213651823238 -0.136 -0.475666666666667 5.3775208465964 19.5092074808973 -0.136 -0.475666666666667 0.289899799734473 0.0111964218190903 -1.17281287256372 -3.77098504666514 Q6P996 PDXDC1 Q6P996.S779.p_PDXDC1 Q6P996_S779s _1_1_779_779 Q6P996 H3BND4|Q6P996|Q6P996-5|Q6P996-4|Q6P996-3 Pyridoxal-dependent decarboxylase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9410.9632.3 18.59 18.59 2.445 2 1 1 0 798.7025 2314.1261 S779s TMT10 770 (K) GVPHPEDDHsQVEGPESLR (-) GVPHPEDDHS(0.99)QVEGPES(0.0)LR s:Phosphorylated S PDXDC1 87618.2 2 17 600.1 263.32 HUMAN 1 -5.3775 -19.5092 PHPNLGKSPSPVQRI-p J3QS41;S1178-p PHPNLGKSPSPVQRI 0.333463124692512 0.361102445129492 0.149 -0.113 8.90181099763351 5.86946037665223 0.149 -0.113 0.128771246669136 0.258853452801011 1.79136589476396 -1.26098004268898 J3QS41 HELZ J3QS41.S1178.p_HELZ J3QS41_T1164tS1178s_2_2_1164_1178 J3QS41 J3QS41|P42694 Probable helicase with zinc finger domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18032.18032.4 10.71 10.71 1.281 4 2 2 0 757.1418 2865.614 T1164t S1178s TMT10 1162 (R) AYtPPPPLGPHPNLGKsPSPVQR (I) AY(0.0)T(0.99)PPPPLGPHPNLGKS(0.99)PS(0.0)PVQR K:TMT10,t:Phosphorylated T,s:Phosphorylated S HELZ 220821.8 3 17 466.1 303.39 HUMAN 1 8.9018 -5.8695 PHPYDGNSSDPENWD-p Q9BSF8;S12-p PHPYDGNSSDPENWD 0.200535848249369 0.0620025025127231 -0.259 0.266333333333333 13.5785832933987 16.0745992421385 -0.259 0.266333333333333 0.043867377366083 0.0246910793850867 -2.61586591684704 3.08033810354512 Q9BSF8 BTBD10 Q9BSF8.S12.p_BTBD10 Q9BSF8_S12sS13s_2_2_12_13 Q9BSF8 Q9BSF8|E9PKU9|E9PN21 BTB/POZ domain-containing protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11566.11566.4 14.17 14.17 4.115 3 2 2 0 683.0402 2569.2017 S12s S13s Acetyl 2 (M) AGRPHPYDGNssDPENWDRK (L) AGRPHPY(0.0)DGNS(0.99)S(0.99)DPENWDRK K:TMT10,s:Phosphorylated S BTBD10 54234.6 2 4 3151.1 59.16 HUMAN 1 -13.5786 16.0746 PHQSRLASIKAEADK-p O15014;S787-p PHQSRLASIKAEADK 0.537243068570589 0.187178585400915 0.0943333333333333 -0.180333333333333 4.98737254090914 9.57148334638151 0.0943333333333334 -0.180333333333333 0.317148561509721 0.110370158279022 1.10174353925583 -1.90661462353636 O15014 ZNF609 O15014.S787.p_ZNF609 O15014_S787s _1_1_787_787 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17546.17546.3 11.31 11.31 99 1 1 1 0 605.0216 1733.0776 S787s TMT10 785 (R) LAsIKAEADK (I) LAS(1.0)IKAEADK K:TMT10,s:Phosphorylated S ZNF609 152443.5 1 20 63.1 699.07 HUMAN 1 4.9874 -9.5715 PHRDRLRSKDELSQA-p Q5VWQ8;S1031-p PHRDRLRSKDELSQA 0.0431670381948327 0.00161667139673784 -0.950333333333333 -0.962 30.2842630140868 44.6463809173186 -0.950333333333333 -0.962 0.000936642152032181 3.43053542416489e-05 -6.51907959925545 -12.4325195022853 Q5VWQ8 DAB2IP Q5VWQ8.S1031.p_DAB2IP Q5VWQ8_S1031s _1_1_1031_1031 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10505.10505.4 12.08 8.2 2.345 2 1 1 0 543.5564 2091.2377 S1031s TMT10 1029 (R) LRsKDELSQAEK (D) LRS(0.99)KDELS(0.0)QAEK K:TMT10,s:Phosphorylated S DAB2IP 132592.9 3 22 281.1 388.28 HUMAN 1 -30.2843 -44.6464 PHRLRSFSASQSTDR-p Q9ULJ3;S411-p PHRLRSFSASQSTDR 0.0355077502794327 0.00147687096540868 -0.816666666666667 -1.068 33.7258486169763 45.6730476917044 -0.816666666666667 -1.068 0.000424048116269856 2.70829040325916e-05 -7.65085109887812 -13.0029470501705 Q9ULJ3 ZBTB21 Q9ULJ3.S411.p_ZBTB21 Q9ULJ3_S411s _1_1_411_411 Q9ULJ3 Q9ULJ3|Q9ULJ3-2 Zinc finger and BTB domain-containing protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11389.11389.2 15.57 8.78 2.081 7 1 1 0 1210.5679 2340.1629 S411s TMT10 409 (R) SFsASQSTDREGASPVTEVR (I) S(0.0)FS(0.99)AS(0.0)QS(0.0)T(0.0)DREGAS(0.0)PVT(0.0)EVR s:Phosphorylated S ZBTB21 120636.9 6 2 692.1 242.92 HUMAN 1 -33.7258 -45.673 PHRPRLPSAESLSRR-p O43281;S298-p PHRPRLPSAESLSRR 0.037841327319889 0.00662062184564889 -0.558 -0.519 32.4053068958621 31.3137814118994 -0.558 -0.519 0.000574737203385465 0.00073896157934289 -7.19866325619977 -6.83056344511597 O43281 EFS O43281.S298.p_EFS O43281_S298s _1_1_298_298 O43281 O43281|O43281-2|O43281-3 Embryonal Fyn-associated substrate HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8942.8942.2 8.33 8.33 8.328 3 1 1 0 520.2444 959.5156 S298s Hydrogen 296 (R) LPsAESLSR (R) LPS(0.99)AES(0.0)LS(0.0)R s:Phosphorylated S EFS 59270.7 3 2 2954.1 64.79 HUMAN 1 -32.4053 -31.3138 PHRRHEHSPHPQSRT-p X6RAB3;S438-p PHRRHEHSPHPQSRT 0.0320113506588935 0.162126134274724 0.611333333333333 0.789 34.9632315090934 10.3897542710642 0.611333333333333 0.789 0.000318916397103346 0.0914164964537949 8.09636166954492 2.04864787331685 X6RAB3 NotFound X6RAB3.S438.p_NotFound X6RAB3_S438s _1_1_438_438 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.0645.0645.4 8.08 8.08 8.083 2 1 1 0 419.9545 1596.8305 S438s TMT10 434 (R) RHEHsPHPQSR (T) RHEHS(0.99)PHPQS(0.0)R s:Phosphorylated S USP6NL 96835.5 2 2 364.1 342.41 HUMAN 1 34.9632 10.3898 PHRTPIITPNTKAIQ-p Q9NQW6;T401-p PHRTPIITPNTKAIQ 0.819486223186259 0.00273807456007999 0.0373333333333333 -0.688 1.6652516746376 38.8429420229457 0.0373333333333333 -0.688 0.681514079686801 0.000130528635388676 0.433323719952753 -9.62291788751653 Q9NQW6 ANLN Q9NQW6.T401.p_ANLN Q9NQW6_T401t _1_1_401_401 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15825.15825.2 9.2 9.2 2.873 3 1 1 0 761.9369 1442.8983 T401t TMT10 397 (R) TPIItPNTK (A) T(0.0)PIIT(0.99)PNT(0.0)K K:TMT10,t:Phosphorylated T ANLN 125566 2 28 68.1 675.08 HUMAN 1 1.6653 -38.8429 PHSASPVSPDGVQIP-p Q6PJF5;S328-p PHSASPVSPDGVQIP 0.0406564911626295 0.00604775327324358 -0.533666666666667 -0.570666666666667 31.0516359356895 32.0251690042005 -0.533666666666667 -0.570666666666667 0.000784939901383557 0.00062731128390669 -6.75857767840967 -7.06054816213224 Q6PJF5 RHBDF2 Q6PJF5.S328.p_RHBDF2 Q6PJF5_S328s _1_1_328_328 Q6PJF5 Q6PJF5|Q6PJF5-2 Inactive rhomboid protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22681.22681.3 16.92 16.92 2.337 3 1 1 0 813.1154 2357.3593 S328s TMT10 319 (R) GIPHSASPVsPDGVQIPLK (E) GIPHS(0.0)AS(0.0)PVS(0.99)PDGVQIPLK K:TMT10,s:Phosphorylated S RHBDF2 98224.8 3 7 1595.1 129.07 HUMAN 1 -31.0516 -32.0252 PHSLEPRSQEQPLLQ-p Q9C0B0;S447-p PHSLEPRSQEQPLLQ 0.419709735831736 0.117968492298336 -0.288666666666667 4.48233333333333 6.95785624472376 12.2400038000879 -0.288666666666667 4.48233333333333 0.201471850555714 0.0597034764176646 -1.45363413663688 2.65381025216677 Q9C0B0 UNK Q9C0B0.S447.p_UNK Q9C0B0_S447s _1_1_447_447 Q9C0B0 Q9C0B0 RING finger protein unkempt homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14424.14424.4 17.78 13.95 2.274 2 1 1 0 748.9293 2912.7289 S447s TMT10 438 (K) LKPHSLEPRsQEQPLLQPK (Q) LKPHS(0.0)LEPRS(0.99)QEQPLLQPK K:TMT10,s:Phosphorylated S UNK 89851.6 2 8 1185.1 168.8 HUMAN 1 -6.9579 12.24 PHSPFAVSPIPGRGG-p P41162;S250-p PHSPFAVSPIPGRGG 0.338626695097025 0.183134030074625 -0.133666666666667 -0.193333333333333 8.74856346169336 9.69888667993132 -0.133666666666667 -0.193333333333333 0.133396260090027 0.107179402594342 -1.76483892673725 -1.92868734154962 P41162 ETV3 P41162.S250.p_ETV3 P41162_S245sS250s_2_2_245_250 P41162 P41162 ETS translocation variant 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28756.28756.5 13.9 7.7 12.668 3 2 2 0 816.4247 3918.1439 S245s S250s TMT10 225 (K) RKPDIMLPLFARPGMYPDPHsPFAVsPIPGR (G) RKPDIMLPLFARPGMY(0.0)PDPHS(0.99)PFAVS(0.99)PIPGR K:TMT10,s:Phosphorylated S ETV3 57285.5 3 6 2187.1 94.05 HUMAN 1 -8.7486 -9.6989 PHTQGDFSFDEDSSD-p Q9ULH7-5;S186-p PHTQGDFSFDEDSSD 0.428040639115941 0.592984753364656 -0.125666666666667 -0.096 6.78544580297168 3.07062908609015 -0.125666666666667 -0.0960000000000001 0.209630958322001 0.493102371707011 -1.42340185974175 -0.734617203723655 Q9ULH7 MKL2 Q9ULH7.5.S186.p_MKL2 Q9ULH7-5_S186s _1_1_186_186 Q9ULH7-5 Q9ULH7-5|Q9ULH7-4|Q9ULH7-3|Q9ULH7-2|I3L2S3 Isoform 5 of MKL/myocardin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22299.22299.5 28.91 28.91 2.175 11 1 1 0 1175.9537 5795.7564 S186s TMT10 168 (K) EAIIGVGKEDYPHTQGDFsFDEDSSDALSPDQPASQESQGSAASPSEPK (V) EAIIGVGKEDY(0.0)PHT(0.0)QGDFS(0.99)FDEDS(0.0)S(0.0)DALS(0.0)PDQPAS(0.0)QES(0.0)QGS(0.0)AAS(0.0)PS(0.0)EPK K:TMT10,s:Phosphorylated S MKL2 119334.1 1 3 464.1 303.55 HUMAN 1 -6.7854 -3.0706 PHVIGRISAEGGEQV-p J3KQL8;S362-p PHVIGRISAEGGEQV 0.157981462649393 0.144894526954526 0.245 -0.180666666666667 16.0768951667538 11.0493932852871 0.245 -0.180666666666667 0.0246780297430852 0.0785345340653272 3.08296890994195 -2.1637843183272 J3KQL8 NotFound J3KQL8.S362.p_NotFound J3KQL8_S362s _1_1_362_362 J3KQL8 J3KQL8 Apolipoprotein L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16338.16338.4 20.21 15.59 2.941 2 1 1 0 806.4138 3142.6595 S362s TMT10 344 (R) ANPQLGAYAPPPHVIGRIsAEGGEQVER (V) ANPQLGAY(0.0)APPPHVIGRIS(0.99)AEGGEQVER s:Phosphorylated S APOL2 49085.6 1 1 5346.1 20.21 HUMAN 1 16.0769 -11.0494 PHVLEALSPPQTSGL-p E9PSH4;S60-p PHVLEALSPPQTSGL 0.500562123425219 0.287045875749291 0.094 0.114 5.54087806259911 7.15069252267807 0.094 0.114 0.279197929792744 0.192721757603867 1.20231852406113 1.48694650555143 E9PSH4 NotFound E9PSH4.S60.p_NotFound E9PSH4_S60s _1_1_60_60 E9PSH4 E9PSH4|Q9H063 Repressor of RNA polymerase III transcription MAF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20391.20391.4 20.6 20.6 4.806 5 1 1 0 790.6334 3079.5468 S60s TMT10 46 (K) QFCQEGQPHVLEALsPPQTSGLSPSR (L) QFCQEGQPHVLEALS(0.99)PPQT(0.0)S(0.0)GLS(0.0)PS(0.0)R C:Carbamidomethylation,s:Phosphorylated S MAF1 32485.4 6 1 1842.1 111.45 HUMAN 1 5.5409 7.1507 PHYSAFGSVGEWLRA-p P54760;S911-p PHYSAFGSVGEWLRA 0.6162038915283 0.148641783362931 -0.0733333333333333 0.188 3.90214980532292 10.8980116224566 -0.0733333333333333 0.188 0.407178670001223 0.0813202748382826 -0.89837866120796 2.13729795174609 P54760 EPHB4 P54760.S911.p_EPHB4 P54760_S911s _1_1_911_911 P54760 P54760 Ephrin type-B receptor 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24909.24909.3 18.63 18.63 2.615 3 1 1 0 681.6625 1963.0024 S911s TMT10 903 (R) QPHYSAFGsVGEWLR (A) QPHY(0.0)S(0.0)AFGS(0.99)VGEWLR s:Phosphorylated S EPHB4 109808.7 1 4 2355.1 86.87 HUMAN 1 -3.9021 10.898 PIAAEVRSPSMESKL-p P50748;S1045-p PIAAEVRSPSMESKL 0.800641969449871 0.0574025429436965 -0.052 -0.255 1.85982712899622 16.5350845021619 -0.052 -0.255 0.651654332658101 0.0222070847394649 -0.477531016588449 -3.16928549301598 P50748 KNTC1 P50748.S1045.p_KNTC1 P50748_S1045s _1_1_1045_1045 P50748 P50748 Kinetochore-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11453.11453.5 20.85 20.85 1.133 5 1 1 0 621.3321 3022.6599 S1045s TMT10 1030 (K) HKPGSTPEPIAAEVRsPSMESK (L) HKPGS(0.0)T(0.0)PEPIAAEVRS(0.99)PS(0.0)MES(0.0)K K:TMT10,s:Phosphorylated S KNTC1 253368.4 3 3 4007.1 39.2 HUMAN 1 -1.8598 -16.5351 PIAHPRTSPQPESGI-p Q5EBL4;S346-p PIAHPRTSPQPESGI 0.266067952192961 0.0743005262384353 -0.254333333333333 -0.325 10.8994188016779 14.9853895256481 -0.254333333333333 -0.325 0.081293930118531 0.0317293406555593 -2.13849750314027 -2.87383835573555 Q5EBL4 RILPL1 Q5EBL4.S346.p_RILPL1 Q5EBL4_S346s _1_1_346_346 Q5EBL4 Q5EBL4|A0A1B0GVV3|Q5EBL4-2|Q5EBL4-3 RILP-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9572.9572.2 10.96 10.96 1.457 3 1 1 0 791.4187 1501.8626 S346s TMT10 345 (R) TsPQPESGIK (R) T(0.0)S(0.99)PQPES(0.0)GIK K:TMT10,s:Phosphorylated S RILPL1 47164.2 3 2 4502.1 30.64 HUMAN 1 -10.8994 -14.9854 PIAKPAYSPASWSSR-p Q9Y446-2;S130-p PIAKPAYSPASWSSR 0.14666043453421 0.0132031691560471 0.255333333333333 -0.565333333333333 16.967017729237 26.1605494847124 0.255333333333333 -0.565333333333333 0.020104729168218 0.00242072274897048 3.25614147937167 -5.33677437872827 Q9Y446 PKP3 Q9Y446.2.S130.p_PKP3 Q9Y446-2_S130s _1_1_130_130 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17272.17272.4 17.42 12.88 1.287 7 1 1 0 676.8555 2624.4349 S130s TMT10 118 (K) TSGFRPIAKPAYsPASWSSR (S) T(0.0)S(0.0)GFRPIAKPAY(0.0)S(0.99)PAS(0.0)WS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S PKP3 89109.7 1 3 454.1 307.47 HUMAN 1 16.967 -26.1605 PIAPSSPSPQVLAQK-p Q9NQS7;S314-p PIAPSSPSPQVLAQK 0.148266672319898 0.00156125241407917 0.284666666666667 -0.876333333333333 16.7874014746963 45.1457799834062 0.284666666666667 -0.876333333333333 0.0209536580644623 3.05789100664333e-05 3.22087815503536 -12.7069746649937 Q9NQS7 INCENP Q9NQS7.S314.p_INCENP Q9NQS7_S314s _1_1_314_314 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15150.15150.3 9.4 9.4 1.338 4 1 1 0 761.4163 2202.2647 S314s TMT10 305 (R) HSPIAPSSPsPQVLAQK (Y) HS(0.0)PIAPS(0.0)S(0.0)PS(0.99)PQVLAQK K:TMT10,s:Phosphorylated S INCENP 105826.3 5 14 138.1 524.38 HUMAN 1 16.7874 -45.1458 PIAQATGSPVQEEAI-p A0A087WX45;S598-p PIAQATGSPVQEEAI 0.837853261844575 0.0345415411834839 -0.0353333333333333 0.462333333333333 1.48716211142126 19.6889900403143 -0.0353333333333333 0.462333333333333 0.710041591658065 0.0107423919956792 -0.391977211579477 3.80902618876884 A0A087WX45 IQCE A0A087WX45.S598.p_IQCE A0A087WX45_S598s _1_1_598_598 A0A087WX45 A0A087WX45 IQ domain-containing protein E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.37609.37609.4 26.65 26.65 1.111 4 1 1 0 746.6564 2903.6403 S598s TMT10 588 (R) VPSPIAQATGsPVQEEAIVIIQSALR (A) VPS(0.0)PIAQAT(0.0)GS(0.99)PVQEEAIVIIQS(0.0)ALR s:Phosphorylated S IQCE 78569.7 1 7 1617.1 127.24 HUMAN 1 -1.4872 19.689 PIAQPLASRRLTRKL-p Q9NX24;S40-p PIAQPLASRRLTRKL 0.292342092370606 0.249438159472392 0.171 0.155666666666667 10.0770225405296 7.94535223917936 0.171 0.155666666666667 0.0982421245832646 0.160496208065365 1.99509514750511 1.62516781146038 Q9NX24 NHP2 Q9NX24.S40.p_NHP2 Q9NX24_S40s _1_1_40_40 Q9NX24 Q9NX24|J3QSY4 H/ACA ribonucleoprotein complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25949.25949.3 17.4 15.23 14.31 3 1 1 0 822.1006 2384.3135 S40s TMT10 23 (R) TYQELLVNQNPIAQPLAsR (R) T(0.0)Y(0.0)QELLVNQNPIAQPLAS(0.99)R s:Phosphorylated S NHP2 17543.1 1 2 4277.1 34.36 HUMAN 1 10.077 7.9454 PICSLFYSGEKAMTN-p Q14966;S1938-p PICSLFYSGEKAMTN 0.592955849291128 0.952589514066416 -0.0716666666666667 -0.00966666666666664 4.18586160568397 0.299597838257984 -0.0711702004916229 -0.00966666666666667 0.381429114272285 0.933340725232259 -0.952494629173733 -0.0875977044819805 Q14966 ZNF638 Q14966.S1938.p_ZNF638 Q14966_S1938s _1_1_1938_1938 Q14966 Q14966|Q14966-5 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.36117.36117.3 19.52 19.52 2.156 3 1 1 0 807.7188 2341.1761 S1938s TMT10 1926 (K) AGFFCPICSLFYsGEK (A) AGFFCPICS(0.0)LFY(0.0)S(0.99)GEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF638 222047.2 1 26 165.1 494.68 HUMAN 1 -4.1859 -0.2996 PIDIDQLSGRDFCHS-p Q8N573-2;S286-p PIDIDQLSGRDFCHS 0.779056963761954 0.413738747023846 -0.0616666666666667 -0.0776666666666666 2.08210072648874 5.09945049613429 -0.0616666666666667 -0.0776666666666666 0.619141517596936 0.309068646596947 -0.526908032666084 -1.12202146471916 Q8N573 OXR1 Q8N573.2.S286.p_OXR1 Q8N573-2_S286s _1_1_286_286 Q8N573-2 Q8N573-8|Q8N573-5|Q8N573-2|Q8N573-3 Isoform 2 of Oxidation resistance protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21583.21583.4 7.77 7.77 2.337 3 1 1 0 689.5941 2675.3863 S286s TMT10 276 (K) ESLPIDIDQLsGRDFCHSK (K) ES(0.0)LPIDIDQLS(0.99)GRDFCHS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S OXR1 94303 1 6 1415.1 144.6 HUMAN 1 -2.0821 -5.0995 PIDLPCGSADESPAG-p Q92574;S561-p PIDLPCGSADESPAG 0.14960211570451 0.647759806785686 0.356 -0.0633333333333333 16.6290233105434 2.57123180316727 0.356 -0.0633333333333334 0.0217318985487867 0.553193183030882 3.18992063964607 -0.631811370507634 Q92574 TSC1 Q92574.S561.p_TSC1 Q92574_S561s _1_1_561_561 Q92574 Q92574|Q92574-2 Hamartin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27933.27933.5 22.27 22.27 5.092 10 1 1 0 1074.7201 5289.5907 S561s TMT10 550 (K) QAFTPIDLPCGsADESPAGDRECQTSLETSIFTPSPCKIPPPTR (V) QAFT(0.0)PIDLPCGS(0.99)ADES(0.0)PAGDRECQT(0.0)S(0.0)LET(0.0)S(0.0)IFT(0.0)PS(0.0)PCKIPPPT(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TSC1 130734.2 1 7 418.1 320.74 HUMAN 1 16.629 -2.5712 PIDSLRDSRSLSYSP-p Q9UQ35;S2688-p PIDSLRDSRSLSYSP 0.336559539837921 0.11833841960229 0.149666666666667 0.727 8.81636595856684 12.2217663497817 0.149666666666667 0.727 0.131329836668586 0.0599547180589406 1.77657550866989 2.37052401408082 Q9UQ35 SRRM2 Q9UQ35.S2688.p_SRRM2 Q9UQ35_S2688s _1_1_2688_2688 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8869.8869.3 7.49 7.49 7.489 2 1 1 0 575.6541 1644.9797 S2688s TMT10 2680 (R) KPIDSLRDsR (S) KPIDS(0.0)LRDS(0.99)R K:TMT10,s:Phosphorylated S SRRM2 300351.7 2 164 2.1 3310.34 HUMAN 1 8.8164 12.2218 PIEIRLISPLASPAD-p Q8WYP5-2;S2257-p PIEIRLISPLASPAD 0.677298626682736 0.0377334978748439 0.0643333333333333 -0.268333333333333 3.16861252616244 19.1213680103944 0.0643333333333333 -0.268333333333333 0.482101793776418 0.0122423051076734 0.754456189122672 -3.68961154165968 Q8WYP5 AHCTF1 Q8WYP5.2.S2257.p_AHCTF1 Q8WYP5-2_S2257s _1_1_2257_2257 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25193.25193.3 17 17 3.93 2 1 1 0 602.6777 1726.0515 S2257s TMT10 2255 (R) LIsPLASPADGVK (S) LIS(0.99)PLAS(0.0)PADGVK K:TMT10,s:Phosphorylated S AHCTF1 258049.6 1 38 40.1 829.79 HUMAN 1 3.1686 -19.1214 PIEQQPCSPGQEAVL-p Q9UL54;S777-p PIEQQPCSPGQEAVL 0.569807842193519 0.439230795161564 -0.0746666666666667 -0.0823333333333333 4.49462713720888 4.75961557330229 -0.0746666666666667 -0.0823333333333333 0.355252617326294 0.334224623451009 -1.01057372993374 -1.05961093809559 Q9UL54 TAOK2 Q9UL54.S777.p_TAOK2 Q9UL54_S777s _1_1_777_777 Q9UL54 Q9UL54|Q9UL54-3 Serine/threonine-protein kinase TAO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29056.29056.4 21.15 21.15 5.25 3 1 1 0 1130.8317 4440.3295 S777s TMT10 747 (R) AGQRPPGLPLPIPGALGPPNTGTPIEQQPCsPGQEAVLDQR (M) AGQRPPGLPLPIPGALGPPNT(0.0)GT(0.0)PIEQQPCS(0.99)PGQEAVLDQR C:Carbamidomethylation,s:Phosphorylated S TAOK2 139047.7 3 5 2238.99 92.22 HUMAN 1 -4.4946 -4.7596 PIFPMARSISTSGPL-p A0A0U1RR27;S1631-p PIFPMARSISTSGPL 0.0404299711718947 0.251490959013146 -0.529 0.146666666666667 31.1227379812149 7.89461540514209 -0.529 0.146666666666667 0.000772193607186239 0.162382214369676 -6.78112671588137 1.61636850815119 A0A0U1RR27 NotFound A0A0U1RR27.S1631.p_NotFound A0A0U1RR27_S1631s _1_1_1631_1631 A0A0U1RR27 A0A0U1RR27 C-myc promoter-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15029.15029.2 11.21 6.46 2.366 4 1 1 0 771.9122 1462.8517 S1631s TMT10 1631 (R) sISTSGPLDK (E) S(0.99)IS(0.0)T(0.0)S(0.0)GPLDK K:TMT10,s:Phosphorylated S DENND4A 217514.7 3 17 399.1 328.24 HUMAN 1 -31.1227 7.8946 PIGFCPGSDEGFTRK-p A0A0C4DG86;S112-p PIGFCPGSDEGFTRK 0.11739359398931 0.0107864844863671 0.306 0.490666666666667 19.3548190267135 27.5667982391735 0.306 0.490666666666667 0.0116016055977285 0.00175113720842806 3.74183525342254 5.71653710919253 A0A0C4DG86 NotFound A0A0C4DG86.S112.p_NotFound A0A0C4DG86_S112s _1_1_112_112 A0A0C4DG86 A0A0C4DG86|Q9NX95|Q9NX95-3|Q9NX95-4|Q9NX95-2 Syntabulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20268.20268.3 22.47 22.47 2.507 5 1 1 0 860.044 2498.1455 S112s TMT10 97 (K) TPSDAGNSPIGFCPGsDEGFTR (K) T(0.0)PS(0.0)DAGNS(0.0)PIGFCPGS(0.99)DEGFT(0.0)R C:Carbamidomethylation,s:Phosphorylated S SYBU 73794.4 1 3 2641.1 75.45 HUMAN 1 19.3548 27.5668 PIGVMDQSLMKDFPG-p O43491;S562-p PIGVMDQSLMKDFPG 0.508613541736117 0.00870438770723535 -0.0876666666666667 -0.51 5.41886161412133 29.2160051106674 -0.0876666666666667 -0.51 0.287153317837701 0.00119784186823507 -1.18029299832142 -6.18762077003683 O43491 EPB41L2 O43491.S562.p_EPB41L2 O43491_S562s _1_1_562_562 O43491 O43491|E9PHY5|O43491-4|E9PK52|O43491-3|E9PII3|O43491-2 Band 4.1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27382.27382.3 17.04 15.26 16.355 2 1 1 0 734.0424 2120.1496 S562s TMT10 550 (R) SLDGAPIGVMDQsLMK (D) S(0.0)LDGAPIGVMDQS(0.99)LMK K:TMT10,s:Phosphorylated S EPB41L2 113099.5 2 8 469.1 302.69 HUMAN 1 -5.4189 -29.216 PIIKNAISLPQLNQA-p Q00587;S121-p PIIKNAISLPQLNQA 0.626617753150603 0.0106932352965192 -0.0703333333333333 -0.407333333333333 3.77158303539384 27.6338990645807 -0.0703333333333333 -0.407333333333333 0.41960600663012 0.00172428914249233 -0.873207691970769 -5.73514872588654 Q00587 CDC42EP1 Q00587.S121.p_CDC42EP1 Q00587_S121s _1_1_121_121 Q00587 Q00587|Q00587-2 Cdc42 effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32273.32482.3 24.25 24.25 7.154 3 1 1 0 880.4784 2559.4547 S121s TMT10 118 (K) NAIsLPQLNQAAYDSLVVGK (L) NAIS(0.99)LPQLNQAAY(0.0)DS(0.0)LVVGK K:TMT10,s:Phosphorylated S CDC42EP1 40408.2 9 2 1362.1 149.93 HUMAN 1 -3.7716 -27.6339 PIIRTVKSVGMIAGG-p P00387-3;S207-p PIIRTVKSVGMIAGG 0.321177419669564 0.253375641207012 0.152666666666667 0.162333333333333 9.23777442639156 7.85362182883586 0.152666666666667 0.162333333333333 0.11918526250887 0.163922216236738 1.84953085774737 1.60925697878044 P00387 CYB5R3 P00387.3.S207.p_CYB5R3 P00387-3_S207s _1_1_207_207 P00387-3 P00387-3|P00387-2 Isoform 3 of NADH-cytochrome b5 reductase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33267.33267.3 19.71 17.09 10.217 3 1 1 0 737.3909 2130.1976 S207s TMT10 207 (K) sVGMIAGGTGITPMLQVIR (A) S(0.99)VGMIAGGT(0.0)GIT(0.0)PMLQVIR s:Phosphorylated S CYB5R3 38568 1 1 4664.1 28.25 HUMAN 1 9.2378 7.8536 PIKEEKGSPLNAAPY-p P18031;S352-p PIKEEKGSPLNAAPY 0.118247488683981 0.0739209332425326 -0.360666666666667 -0.221666666666667 19.2918321979591 15.0158348475716 -0.360666666666667 -0.221666666666667 0.0117710927087078 0.0315076864734287 -3.72859117243031 -2.87954008547546 P18031 PTPN1 P18031.S352.p_PTPN1 P18031_S352s _1_1_352_352 P18031 P18031|B4DSN5 Tyrosine-protein phosphatase non-receptor type 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18943.18943.5 28.5 22.22 1.209 6 1 1 0 1016.3004 4997.5166 S352s TMT10 336 (K) EETQEDKDCPIKEEKGsPLNAAPYGIESMSQDTEVR (S) EET(0.0)QEDKDCPIKEEKGS(0.99)PLNAAPY(0.0)GIES(0.0)MS(0.0)QDT(0.0)EVR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PTPN1 50536.5 9 4 1124.1 174.81 HUMAN 1 -19.2918 -15.0158 PIKLRPRSIEVENDF-p Q96B97;S230-p PIKLRPRSIEVENDF 0.244395387293756 0.0199261352687015 -0.241666666666667 -0.361666666666667 11.7046343028956 23.3196286261521 -0.241666666666667 -0.361666666666667 0.0675361920363614 0.00465625908417991 -2.28005187563982 -4.62512303788555 Q96B97 SH3KBP1 Q96B97.S230.p_SH3KBP1 Q96B97_S230s _1_1_230_230 Q96B97 Q96B97|Q96B97-2|Q5VSN0 SH3 domain-containing kinase-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27280.27280.3 18.43 15.56 99 1 1 1 0 686.3589 1977.0945 S230s TMT10 230 (R) sIEVENDFLPVEK (T) S(1.0)IEVENDFLPVEK K:TMT10,s:Phosphorylated S SH3KBP1 73296.1 3 3 2944.1 65.24 HUMAN 1 -11.7046 -23.3196 PIKLSPATPSRKRSV-p Q9Y6X9;T733-p PIKLSPATPSRKRSV 0.953803111483038 0.0129019895464335 -0.00966666666666667 -0.78 0.402426206140828 26.3069214271783 -0.00966666666666667 -0.78 0.911501482587327 0.00234049575233691 -0.116442424423175 -5.37540803945052 Q9Y6X9 MORC2 Q9Y6X9.T733.p_MORC2 Q9Y6X9_T733t _1_1_733_733 Q9Y6X9 Q9Y6X9|Q9Y6X9-2 MORC family CW-type zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7542.7542.3 10.72 10.72 3.413 3 1 1 0 379.8672 1057.6203 T733t TMT10 729 (K) LSPAtPSR (K) LS(0.0)PAT(0.99)PS(0.0)R t:Phosphorylated T MORC2 118619.8 2 8 309.1 372.4 HUMAN 1 -0.4024 -26.3069 PIKNLLDTPVKTQYD-p Q6N021;T1122-p PIKNLLDTPVKTQYD 0.0775649771385732 0.0016237919479163 -0.646333333333333 -1.16233333333333 23.7597861146489 44.4676130494946 -0.646333333333333 -1.16233333333333 0.00420747349227628 3.57469254872417e-05 -4.73637215698601 -12.3356384773058 Q6N021 TET2 Q6N021.T1122.p_TET2 Q6N021_T1122t _1_1_1122_1122 Q6N021 E7EQS8|Q6N021|Q6N021-3|E7EPB1|Q6N021-2 Methylcytosine dioxygenase TET2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18094.18094.2 8.11 5.78 99 1 1 1 0 719.4089 1357.8455 T1122t TMT10 1118 (K) NLLDtPVK (T) NLLDT(1.0)PVK K:TMT10,t:Phosphorylated T TET2 226374.6 3 14 594.1 264.06 HUMAN 1 -23.7598 -44.4676 PIKVCPRSPPLETRT-p Q9BYV9;S510-p PIKVCPRSPPLETRT 0.363920347814779 0.263512217077408 -0.204333333333333 -0.125666666666667 8.14603063923745 7.63123399772548 -0.204333333333333 -0.125666666666667 0.153248748330791 0.172534758470134 -1.66048392845756 -1.57064233898399 Q9BYV9 BACH2 Q9BYV9.S510.p_BACH2 Q9BYV9_S510s _1_1_510_510 Q9BYV9 Q9BYV9 Transcription regulator protein BACH2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8888.8888.3 8.98 8.98 1.518 2 1 1 0 540.9432 1540.8467 S510s TMT10 506 (K) VCPRsPPLETR (T) VCPRS(0.99)PPLET(0.0)R C:Carbamidomethylation,s:Phosphorylated S BACH2 94703 1 2 4791.1 26.58 HUMAN 1 -8.146 -7.6312 PIKYLEESDEDDLF_-p P11388-2;S1551-p PIKYLEESDEDDLF_ 0.322409753465923 0.0166549993785089 0.158 -0.427 9.20249334004953 24.5572773471116 0.158 -0.427 0.120157439735957 0.003501646213335 1.84342124740238 -4.92650814334347 P11388 TOP2A P11388.2.S1551.p_TOP2A P11388-2_S1551s _1_1_1551_1551 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25525.25734.3 17.22 12.27 17.221 2 1 1 0 870.1184 2528.3739 S1551s TMT10 1543 (K) KPIKYLEEsDEDDLF (-) KPIKY(0.0)LEES(0.99)DEDDLF K:TMT10,s:Phosphorylated S TOP2A 178239.3 27 17 71.2 658.36 HUMAN 1 9.2025 -24.5573 PILAPSGTPPPTIPP-p Q8IZL8;T745-p PILAPSGTPPPTIPP 0.437175849613648 0.22904646104601 0.107333333333333 0.172666666666667 6.61821965263156 8.43246755707072 0.107333333333333 0.172666666666667 0.217860268599078 0.143467405435245 1.39400474678412 1.70953895703732 Q8IZL8 PELP1 Q8IZL8.T745.p_PELP1 Q8IZL8_T745t_1_1_745_745 Q8IZL8 C9JFV4|Q8IZL8|E7EV54 Proline-, glutamic acid- and leucine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22188.22188.5 11.73 11.73 1.151 5 1 1 0 691.3484 3371.7433 N735n T745t TMT10 732 (R) AGSnEDPILAPSGtPPPTIPPDETFGGRVPR (P) AGS(0.0)N(1.0)EDPILAPS(0.0)GT(0.99)PPPT(0.0)IPPDET(0.0)FGGRVPR n:Deamidated,t:Phosphorylated T PELP1 120952.6 12 5 911.1 201.81 HUMAN 1 6.6182 8.4325 PILIRECSDVQPKLW-p O43678;S59-p PILIRECSDVQPKLW 0.974822174778094 0.643842493749598 0.00766666666666665 -0.0466666666666667 0.21629078297364 2.60694430232816 0.00766666666666666 -0.0454255012290571 0.951417031850041 0.548662868552685 0.0638039464756905 -0.639298325768801 O43678 NDUFA2 O43678.S59.p_NDUFA2 O43678_S59s _1_1_59_59 O43678 O43678|O43678-2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20453.20453.4 13.64 6.42 99 1 1 1 0 740.9118 2880.6584 S59s TMT10 46 (K) KANPDLPILIRECsDVQPK (L) KANPDLPILIRECS(1.0)DVQPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NDUFA2 11035.5 2 1 5122.1 22.69 HUMAN 1 0.2163 -2.6069 PILPGRHSPAPPPDP-p Q6ZSZ5;S1111-p PILPGRHSPAPPPDP 0.3851629764389 0.0961308327602298 0.118 0.218666666666667 7.67109473914044 13.449867576335 0.118 0.218666666666667 0.170958432071871 0.0451869722429895 1.57804684734167 2.59097467832458 Q6ZSZ5 ARHGEF18 Q6ZSZ5.S1111.p_ARHGEF18 Q6ZSZ5_S1111s _1_1_1111_1111 Q6ZSZ5 Q6ZSZ5|Q6ZSZ5-2 Rho guanine nucleotide exchange factor 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25994.25994.5 21.62 18.4 2.374 7 1 1 0 868.6424 4259.2541 S1111s TMT10 1101 (R) SLSPILPGRHsPAPPPDPGFPAPSPPPADSPSEGFSLK (A) S(0.0)LS(0.0)PILPGRHS(0.99)PAPPPDPGFPAPS(0.0)PPPADS(0.0)PS(0.0)EGFS(0.0)LK K:TMT10,s:Phosphorylated S ARHGEF18 131234.5 1 8 799.1 223.19 HUMAN 1 7.6711 13.4499 PILQKQSTFPQSSKD-p P25054;T1932-p PILQKQSTFPQSSKD 0.917303146620715 0.0556371090518036 -0.0156666666666667 -0.232333333333333 0.731582669909685 16.7167773655622 -0.0156666666666667 -0.232333333333333 0.844970862048218 0.0212971879420071 -0.205123769071334 -3.20466668995543 P25054 APC P25054.T1932.p_APC P25054_T1932t _1_1_1932_1932 P25054 P25054 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8755.8755.2 7.95 7.95 1.103 4 1 1 0 774.3978 1467.8208 T1932t TMT10 1930 (K) QStFPQSSK (D) QS(0.0)T(0.99)FPQS(0.0)S(0.0)K K:TMT10,t:Phosphorylated T APC 313808.5 1 25 33.1 890.71 HUMAN 1 -0.7316 -16.7168 PILQSVPSAPPPKAQ-p I3L2J0;S1803-p PILQSVPSAPPPKAQ 0.458605016207802 0.00529900879737328 0.114666666666667 -0.55 6.24530734249462 33.0523959991315 0.114666666666667 -0.55 0.237393741745384 0.0004951769267234 1.32814773377349 -7.40399613951569 I3L2J0 NotFound I3L2J0.S1803.p_NotFound I3L2J0_S1803s _1_1_1803_1803 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.32988.32988.4 20.52 20.52 1.112 4 1 1 0 715.9138 2780.669 S1803s TMT10 1785 (K) VLAATAPTPGIPILQSVPsAPPPK (A) VLAAT(0.0)APT(0.0)PGIPILQS(0.0)VPS(0.99)APPPK K:TMT10,s:Phosphorylated S CIC 259056.7 2 29 23.1 999.57 HUMAN 1 6.2453 -33.0524 PILSKGPSPPLNGNI-p E9PGC8;S2312-p PILSKGPSPPLNGNI 0.862056719598785 0.147398783302513 0.0293333333333333 0.18 1.25944755103049 10.9453973753535 0.0270469759482631 0.18 0.7482646782711 0.0804378145343484 0.337749053453983 2.14558435669245 E9PGC8 NotFound E9PGC8.S2312.p_NotFound E9PGC8_S2312sS2328s_2_2_2312_2328 E9PGC8 P78559|E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17328.17328.4 8.86 8.86 1.173 5 2 2 0 763.6262 2891.5562 S2312s S2328s TMT10 2310 (K) GPsPPLNGNILSCSPDRRsPSPK (E) GPS(0.99)PPLNGNILS(0.0)CS(0.0)PDRRS(0.99)PS(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP1A 332906.7 7 54 20.1 1016.98 HUMAN 1 1.2594 10.9454 PINACELSPKGKEQA-p O43303;S400-p PINACELSPKGKEQA 0.8286411774081 0.127250624703558 0.0393333333333333 -0.175333333333333 1.56815811833387 11.802093208683 0.0393333333333333 -0.175333333333333 0.696922022293413 0.0660375084295377 0.410891691848325 -2.29615635705285 O43303 CCP110 O43303.S400.p_CCP110 O43303_S400s _1_1_400_400 O43303 O43303|O43303-2 Centriolar coiled-coil protein of 110 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18894.18894.4 19.67 15.13 19.669 4 1 1 0 823.687 3211.7535 S400s TMT10 382 (R) TSSACHILINNPINACELsPKGK (E) T(0.0)S(0.0)S(0.0)ACHILINNPINACELS(0.99)PKGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCP110 114220.9 2 6 1000.1 190.08 HUMAN 1 1.5682 -11.8021 PINGSPRTPRRGQNR-p P06400;T252-p PINGSPRTPRRGQNR 0.831146977354747 0.0107746072311629 0.033 -0.539666666666667 1.54601279867791 27.5798932238253 0.033 -0.539666666666667 0.700484806896765 0.00174586507644603 0.40573880627983 -5.72016564083556 P06400 RB1 P06400.T252.p_RB1 P06400_S249sT252t_2_2_249_252 P06400 P06400 Retinoblastoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15298.15298.4 9.16 7.38 9.161 3 2 2 0 467.7396 1708.0067 S249s T252t TMT10 241 (K) TAVIPINGsPRtPR (R) T(0.0)AVIPINGS(0.99)PRT(0.99)PR s:Phosphorylated S,t:Phosphorylated T RB1 107013.3 8 16 155.1 502.88 HUMAN 1 1.546 -27.5799 PINNQPLSEEQLIDI-p Q9UMS4;S48-p PINNQPLSEEQLIDI 0.417803412052618 0.868594137943669 0.110666666666667 -0.0176666666666666 6.99646120316028 0.861225898873235 0.110666666666667 -0.0176666666666666 0.199688879326097 0.820120013386573 1.46039375055743 -0.238673665560405 Q9UMS4 PRPF19 Q9UMS4.S48.p_PRPF19 Q9UMS4_S48s _1_1_48_48 Q9UMS4 Q9UMS4 Pre-mRNA-processing factor 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28574.28574.4 17.24 14.43 2.928 3 1 1 0 813.9163 3172.6778 S48s TMT10 33 (K) YIAENGTDPINNQPLsEEQLIDIK (V) Y(0.0)IAENGT(0.0)DPINNQPLS(0.99)EEQLIDIK K:TMT10,s:Phosphorylated S PRPF19 55636.2 2 1 4217.1 35.24 HUMAN 1 6.9965 -0.8612 PIPHIPRSPYKFPSS-p P06400;S788-p PIPHIPRSPYKFPSS 0.471088586183421 0.00190404013065414 -0.203 -1.139 6.03388542952057 42.6526710612519 -0.203 -1.139 0.249236392780895 5.42916316477748e-05 -1.29059776323744 -11.3913285673619 P06400 RB1 P06400.S788.p_RB1 P06400_S788s _1_1_788_788 P06400 P06400 Retinoblastoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16995.16995.3 10.44 3.73 6.161 4 1 1 0 606.3296 1737.01 S788s TMT10 788 (R) sPYKFPSSPLR (I) S(0.99)PY(0.0)KFPS(0.0)S(0.0)PLR K:TMT10,s:Phosphorylated S RB1 107013.3 1 7 155.1 502.88 HUMAN 1 -6.0339 -42.6527 PIPIMPASPQKGHAV-p O00429-6;S629-p PIPIMPASPQKGHAV 0.373695113080525 0.00917359434218356 -0.128333333333333 -0.583333333333333 7.92075143319875 28.8032190882848 -0.128333333333333 -0.583333333333333 0.161407925839541 0.00131727997908364 -1.62141002916988 -6.06698922837198 O00429 DNM1L O00429.6.S629.p_DNM1L O00429-6_S629s _1_1_629_629 O00429-6 O00429-6|O00429-8|O00429-2|G8JLD5|O00429-3|O00429-5|O00429-4|O00429-7 Isoform 6 of Dynamin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26290.26290.4 22.93 22.93 11.674 2 1 1 0 925.5344 3619.1489 S629s TMT10 620 (K) SKPIPIMPAsPQKGHAVNLLDVPVPVAR (K) S(0.0)KPIPIMPAS(0.99)PQKGHAVNLLDVPVPVAR K:TMT10,s:Phosphorylated S DNM1L 83910.8 27 3 2824.1 69.19 HUMAN 1 -7.9208 -28.8032 PIPKVLISVGSYKSS-p Q8TEV9;S414-p PIPKVLISVGSYKSS 0.237990270998614 0.0151326960325171 -0.249 -0.373333333333333 11.9251550460831 25.1798243215402 -0.249 -0.373333333333333 0.0641925303929117 0.00303401391200523 -2.31906618938914 -5.08306153571833 Q8TEV9 SMCR8 Q8TEV9.S414.p_SMCR8 Q8TEV9_S414s _1_1_414_414 Q8TEV9 Q8TEV9|Q8TEV9-2 Guanine nucleotide exchange protein SMCR8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24187.24187.2 9.98 5.93 2.505 3 1 1 0 752.4358 1423.8925 S414s TMT10 411 (K) VLIsVGSYK (S) VLIS(0.99)VGS(0.0)Y(0.0)K K:TMT10,s:Phosphorylated S SMCR8 105933.1 1 2 2079.1 98.78 HUMAN 1 -11.9252 -25.1798 PIPRGPVTPGGLPPR-p Q9H0L4;T320-p PIPRGPVTPGGLPPR 0.681222809414458 0.0897902460168064 0.0653333333333333 -0.189 3.12856926526306 13.8532494141252 0.0653333333333333 -0.189 0.486567473518608 0.0411789300888596 0.746407349092402 -2.66443611937807 Q9H0L4 CSTF2T Q9H0L4.T320.p_CSTF2T Q9H0L4_T320t _1_1_320_320 Q9H0L4 Q9H0L4 Cleavage stimulation factor subunit 2 tau variant HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13093.13093.2 7.68 7.68 99 1 1 1 0 678.8645 1276.7575 T320t TMT10 317 (R) GPVtPGGLPPR (G) GPVT(1.0)PGGLPPR t:Phosphorylated T CSTF2T 64663.7 1 5 2570.1 78.15 HUMAN 1 3.1286 -13.8532 PIQARLGSIAEIDLG-p Q9BXP5;S136-p PIQARLGSIAEIDLG 0.306383440584975 0.025840115819791 -0.195333333333333 0.352333333333333 9.62046851398065 21.5915094033028 -0.195333333333333 0.352333333333333 0.109132259894652 0.0069318484570466 -1.91584150985412 4.22477680998396 Q9BXP5 SRRT Q9BXP5.S136.p_SRRT Q9BXP5_S136s _1_1_136_136 Q9BXP5 Q9BXP5|Q9BXP5-3|Q9BXP5-2|Q9BXP5-4|Q9BXP5-5 Serrate RNA effector molecule homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.34815.35020.3 18.08 14.21 99 1 1 1 0 758.7586 2194.2921 S136s TMT10 134 (R) LGsIAEIDLGVPPPVMK (T) LGS(1.0)IAEIDLGVPPPVMK K:TMT10,s:Phosphorylated S SRRT 101121.1 3 6 321.1 364.45 HUMAN 1 -9.6205 21.5915 PIQEFHLSRILQELG-p P39748;S210-p PIQEFHLSRILQELG 0.608865588889432 0.0237648963408867 -0.123 0.484333333333333 3.9889218976653 22.1486669218008 -0.123 0.484333333333333 0.399123969492122 0.00609724024893113 -0.915011433796947 4.35136709937708 P39748 FEN1 P39748.S210.p_FEN1 P39748_S210s _1_1_210_210 P39748 P39748|P39748-2 Flap endonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19163.19163.4 16.53 16.53 99 1 1 1 0 477.2734 1826.1053 S210s TMT10 201 (K) KLPIQEFHLsR (I) KLPIQEFHLS(1.0)R K:TMT10,s:Phosphorylated S FEN1 42934.5 1 3 2496.1 81.21 HUMAN 1 -3.9889 22.1487 PIQSKPQSPVIQAAA-p Q9Y6D5;S218-p PIQSKPQSPVIQAAA 0.545021211681862 0.299194645292065 -0.113333333333333 0.102666666666667 4.86561817443064 6.9190318724233 -0.113333333333333 0.102666666666667 0.326165620700647 0.203281011367468 -1.07937342212476 1.44643760273061 Q9Y6D5 ARFGEF2 Q9Y6D5.S218.p_ARFGEF2 Q9Y6D5_S218sS227s_2_2_218_227 Q9Y6D5 Q9Y6D5 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19536.19758.5 20.41 20.41 4.366 3 2 2 0 705.1969 3362.0229 S218s S227s TMT10 207 (R) ELEKPIQSKPQsPVIQAAAVsPK (F) ELEKPIQS(0.0)KPQS(0.99)PVIQAAAVS(0.99)PK K:TMT10,s:Phosphorylated S ARFGEF2 204545.1 10 13 205.1 448.88 HUMAN 2 -4.8656 6.919 PIREELVSSDELRQD-p Q8N573-2;S346-p PIREELVSSDELRQD 0.711199649366842 0.0161232511092333 0.0806666666666667 0.566333333333333 2.78280795865722 24.7614095324696 0.0806666666666667 0.566333333333333 0.526889087771607 0.00334086592337894 0.67594201709018 4.97746648814008 Q8N573 OXR1 Q8N573.2.S346.p_OXR1 Q8N573-2_S346sS347s_2_2_346_347 Q8N573-2 Q8N573|Q8N573-8|Q8N573-5|Q8N573-2|Q8N573-3 Isoform 2 of Oxidation resistance protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17085.17085.3 7.02 7.02 99 2 2 2 0 722.6765 2006.0806 S346s S347s TMT10 342 (R) EELVssDELRQDK (S) EELVS(1.0)S(1.0)DELRQDK K:TMT10,s:Phosphorylated S OXR1 94303 1 12 1415.1 144.6 HUMAN 1 2.7828 24.7614 PIRRVSRTPEPKKIK-p A9Z1X7;T736-p PIRRVSRTPEPKKIK 0.0928082233286524 0.0044825839263387 0.359666666666667 0.567 21.9730164327153 34.4590603921087 0.359666666666667 0.567 0.00634889810054529 0.000358173920619681 4.31576157302527 7.8971831578383 A9Z1X7 NotFound A9Z1X7.T736.p_NotFound A9Z1X7_T736t _1_1_736_736 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6095.6095.4 8.88 5 1.128 2 1 1 0 453.0209 1729.0939 T736t TMT10 733 (R) VSRtPEPKK (I) VS(0.0)RT(0.99)PEPKK K:TMT10,t:Phosphorylated T SRRM1 103445.7 13 43 8.1 1346.57 HUMAN 1 21.973 34.4591 PIRSEPRSPSHSMRT-p Q03164-3;S750-p PIRSEPRSPSHSMRT 0.994180499871288 0.0171004325308132 0.00433333333333333 -0.431 0.0498129123374089 24.3767494170314 -0.00159813096850625 -0.431 0.988595680984694 0.00365027058108669 -0.0149659101815586 -4.88174283408093 Q03164 KMT2A Q03164.3.S750.p_KMT2A Q03164-3_S750s _1_1_750_750 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3537.3537.3 13.41 11.75 3.351 4 1 1 0 527.2465 1499.7586 S750s TMT10 746 (R) SEPRsPSHSMR (T) S(0.0)EPRS(0.99)PS(0.0)HS(0.0)MR s:Phosphorylated S KMT2A 436608.3 3 15 26.1 936.8 HUMAN 1 -0.0498 -24.3767 PISDDRNSSVKKEQK-p Q96Q89-2;S1723-p PISDDRNSSVKKEQK 0.176928139947138 0.000952253650599092 0.396 -1.54233333333333 14.9122153289182 57.934074562328 0.396 -1.54233333333333 0.0322684769219501 1.60913523182187e-06 2.86200324186411 -22.0814836805804 Q96Q89 KIF20B Q96Q89.2.S1723.p_KIF20B Q96Q89-2_S1723s _1_1_1723_1723 Q96Q89-2 Q96Q89-2|Q96Q89-3 Isoform 2 of Kinesin-like protein KIF20B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15324.15324.5 12.46 9.21 1.223 4 1 1 0 589.94 2865.6968 S1723s TMT10 1711 (R) TNLKFPISDDRNsSVKK (E) T(0.0)NLKFPIS(0.0)DDRNS(0.99)S(0.0)VKK K:TMT10,s:Phosphorylated S KIF20B 215641.1 3 14 486.1 295.59 HUMAN 1 14.9122 -57.9341 PISDDSESIEESDTR-p Q71F23;S141-p PISDDSESIEESDTR 0.729051200720934 0.0387125750855136 0.0513333333333333 0.262333333333333 2.60497299777496 18.9617534449499 0.0513333333333333 0.262333333333333 0.548911968452255 0.0127006122002283 0.638968765795029 3.6563920834363 Q71F23 CENPU Q71F23.S141.p_CENPU Q71F23_S141s _1_1_141_141 Q71F23 Q71F23|Q71F23-3|Q09GN1 Centromere protein U HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12505.12505.3 13.35 9.13 1.128 5 1 1 0 753.3509 2178.0724 S141s TMT10 132 (K) LRPISDDSEsIEESDTR (R) LRPIS(0.0)DDS(0.0)ES(0.99)IEES(0.0)DT(0.0)R s:Phosphorylated S CENPU 47749 2 6 1181.1 168.95 HUMAN 1 2.605 18.9618 PISDNSFSSDEEQST-p O60293;S1303-p PISDNSFSSDEEQST 0.699674004566978 0.0484918662407887 0.0533333333333333 0.233333333333333 2.91479836148101 17.5759905923155 0.0533333333333333 0.233333333333333 0.511116809121066 0.0174743464055512 0.703053112430785 3.37427574386161 O60293 ZFC3H1 O60293.S1303.p_ZFC3H1 O60293_S1303sS1304s_2_2_1303_1304 O60293 O60293|O60293-2 Zinc finger C3H1 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15488.15488.3 18.03 18.03 3.447 6 2 2 0 928.7628 2624.3456 S1303s S1304s Hydrogen 1295 (R) KPISDNSFssDEEQSTGPIK (Y) KPIS(0.0)DNS(0.0)FS(0.99)S(0.99)DEEQS(0.0)T(0.0)GPIK K:TMT10-Lys-Only,s:Phosphorylated S ZFC3H1 228291.3 13 26 311.1 371.67 HUMAN 1 2.9148 17.576 PISENSRSVAATIPR-p Q9UQC2;S381-p PISENSRSVAATIPR 0.18878716220005 0.912372735326617 0.276333333333333 -0.034 14.1812737951111 0.557498424915695 0.276333333333333 -0.034 0.0381832262186087 0.879528987519487 2.72626176858768 -0.158859718630751 Q9UQC2 GAB2 Q9UQC2.S381.p_GAB2 Q9UQC2_S381sT385tS398s_3_3_381_398 Q9UQC2 Q9UQC2|Q9UQC2-2 GRB2-associated-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12611.12611.4 7.8 7.8 1.549 6 3 3 0 855.6557 3179.6905 S381s T385t S398s TMT10 373 (R) PPISENSRsVAAtIPRRNTLPAMDNsR (L) PPIS(0.0)ENS(0.0)RS(0.99)VAAT(0.99)IPRRNT(0.0)LPAMDNS(0.99)R s:Phosphorylated S,t:Phosphorylated T GAB2 74969.7 2 18 698.1 241.06 HUMAN 1 14.1813 -0.5575 PISLRWNSPAEEGSS-p P34932;S408-p PISLRWNSPAEEGSS 0.892082939658009 0.502030551462815 -0.0206666666666667 -0.0933333333333333 0.97038182970541 4.00680884692645 -0.0206666666666667 -0.0933333333333333 0.79976393703944 0.397483509158935 -0.266432431017317 -0.918275172887629 P34932 HSPA4 P34932.S408.p_HSPA4 P34932_S408s _1_1_408_408 P34932 P34932|A0A087WYC1|A0A087WTS8 Heat shock 70 kDa protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19784.19784.3 22.34 20.79 5.68 4 1 1 0 823.0362 2387.1226 S408s TMT10 406 (R) WNsPAEEGSSDCEVFSK (N) WNS(0.99)PAEEGS(0.0)S(0.0)DCEVFS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HSPA4 95185.1 1 10 549.1 274.67 HUMAN 1 -0.9704 -4.0068 PISPGPLTPMREKDV-p P11137;T290-p PISPGPLTPMREKDV 0.0431670381948327 0.0135714184448837 -0.599333333333333 -0.661666666666667 30.2755067400413 25.9518756862926 -0.599333333333333 -0.661666666666667 0.000938532521176144 0.00253987551486296 -6.51638700888274 -5.2820460107504 P11137 MAP2 P11137.T290.p_MAP2 P11137_S285sT290t_2_2_285_290 P11137 P11137|P11137-3 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27292.27292.4 7.13 5.68 99 2 2 2 0 792.921 3008.721 S285s T290t TMT10 275 (K) KDEWGLVAPIsPGPLtPMREK (D) KDEWGLVAPIS(1.0)PGPLT(1.0)PMREK K:TMT10,s:Phosphorylated S,t:Phosphorylated T MAP2 199979.2 1 26 117.1 560.28 HUMAN 1 -30.2755 -25.9519 PISQRRPSQNAISFF-p Q9BXB4;S189-p PISQRRPSQNAISFF 0.440541730691833 0.979730614311367 0.122 0.00266666666666669 6.55779775260238 0.127054940405747 0.122 0.00266666666666669 0.220912466568212 0.971168317544736 1.38336363775333 0.0378414435125149 Q9BXB4 OSBPL11 Q9BXB4.S189.p_OSBPL11 Q9BXB4_S189s _1_1_189_189 Q9BXB4 Q9BXB4 Oxysterol-binding protein-related protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18108.18108.3 20.73 20.73 4.758 3 1 1 0 776.407 2247.2399 S189s TMT10 187 (R) RPsQNAISFFNVGHSK (L) RPS(0.99)QNAIS(0.0)FFNVGHS(0.0)K K:TMT10,s:Phosphorylated S OSBPL11 84383.5 9 6 1360.1 150.18 HUMAN 1 6.5578 0.1271 PISTSESSEEEEEAE-p E7ETY2;S88-p PISTSESSEEEEEAE 0.115313884527732 0.0584649017029258 -0.292333333333333 -0.286666666666667 19.5192533707547 16.4223995334705 -0.292333333333333 -0.286666666666667 0.0111705527288848 0.0227908250135797 -3.776528126618 -3.14742431378771 E7ETY2 TCOF1 E7ETY2.S88.p_TCOF1 E7ETY2_S87sS88s_2_2_87_88 E7ETY2 E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2|Q13428-5 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19883.19883.3 18.61 18.61 2.466 7 2 2 0 1024.777 2912.3784 S87s S88s TMT10 78 (R) VSDPISTSEssEEEEEAEAETAK (A) VS(0.0)DPIS(0.0)T(0.0)S(0.0)ES(0.99)S(0.99)EEEEEAEAET(0.0)AK K:TMT10,s:Phosphorylated S TCOF1 152529.5 1 37 19.1 1034.65 HUMAN 1 -19.5193 -16.4224 PITEAVGSDKTNRHP-p Q6P0N0;S860-p PITEAVGSDKTNRHP 0.478558986029447 0.30770683993842 -0.262 0.140666666666667 5.88920163486118 6.76432644951475 -0.262 0.140666666666667 0.257679480659997 0.210652857671439 -1.26480054232381 1.41931443333807 Q6P0N0 MIS18BP1 Q6P0N0.S860.p_MIS18BP1 Q6P0N0_S860s _1_1_860_860 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21815.21815.3 16.08 16.08 5.215 2 1 1 0 610.9822 1750.9627 S860s TMT10 851 (K) EFPITEAVGsDK (T) EFPIT(0.0)EAVGS(0.99)DK K:TMT10,s:Phosphorylated S MIS18BP1 129996 1 30 54.1 728.39 HUMAN 1 -5.8892 6.7643 PITGNDLSPPVSFNL-p P41250;S273-p PITGNDLSPPVSFNL 0.702989906923953 0.150817136830642 0.054 0.158 2.87637783741902 10.8059387538775 0.054 0.158 0.515658541913092 0.0830627154195645 0.69518941441442 2.12120815230129 P41250 GARS P41250.S273.p_GARS P41250_S273s _1_1_273_273 P41250 P41250 Glycine--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35742.35742.3 14.25 14.25 3.546 4 1 1 0 868.118 2522.3729 S273s TMT10 265 (K) SPITGNDLsPPVSFNLMFK (T) S(0.0)PIT(0.0)GNDLS(0.99)PPVS(0.0)FNLMFK K:TMT10,s:Phosphorylated S GARS 83905.8 2 1 2422.1 84.16 HUMAN 1 2.8764 10.8059 PITPNWRSPRLRHEI-p P26045;S381-p PITPNWRSPRLRHEI 0.212579182379981 0.0183340343193496 -0.222333333333333 -0.406666666666667 12.9798219908611 23.9075044842151 -0.222333333333333 -0.406666666666667 0.0503521246753705 0.00406676944201312 -2.50743158856314 -4.76668376478515 P26045 PTPN3 P26045.S381.p_PTPN3 P26045_S381s _1_1_381_381 P26045 P26045|J3KN34 Tyrosine-protein phosphatase non-receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13162.13162.3 10.4 7.64 2.232 3 1 1 0 572.9652 1636.9121 S381s TMT10 372 (R) SPPITPNWRsPR (L) S(0.0)PPIT(0.0)PNWRS(0.99)PR s:Phosphorylated S PTPN3 105129.1 1 3 1253.1 161.68 HUMAN 1 -12.9798 -23.9075 PITVIEGSPDSTIWK-p Q13470-2;S411-p PITVIEGSPDSTIWK 0.826776350969775 0.911141822426478 0.0333333333333333 0.0216666666666667 1.59311096230508 0.565612019438877 0.0333333333333333 0.0216666666666667 0.692929265263289 0.877887364135745 0.416681392310905 0.161046540835227 Q13470 TNK1 Q13470.2.S411.p_TNK1 Q13470-2_S411s _1_1_411_411 Q13470-2 Q13470-2 Isoform 2 of Non-receptor tyrosine-protein kinase TNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.31149.31149.3 17.23 13.01 1.143 5 1 1 0 905.4498 2634.3737 S411s TMT10 399 (R) METGDPITVIEGsPDSTIWK (G) MET(0.0)GDPIT(0.0)VIEGS(0.99)PDS(0.0)T(0.0)IWK K:TMT10,s:Phosphorylated S TNK1 72548.5 1 3 1259.1 161.29 HUMAN 1 1.5931 0.5656 PIVCSPCTPPKRLPD-p Q8NCN4;T391-p PIVCSPCTPPKRLPD 0.186966364173873 0.00209694905349103 -0.2232 -0.828433333333333 14.3149069152621 41.6872679944008 -0.2232 -0.828433333333333 0.0370262141348311 6.78067923992896e-05 -2.75092147003962 -10.9169305449703 Q8NCN4 RNF169 Q8NCN4.T391.p_RNF169 Q8NCN4_S368sT391t_2_2_368_391 Q8NCN4 Q8NCN4 E3 ubiquitin-protein ligase RNF169 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26494.26494.5 8.46 8.46 1.174 7 2 2 0 821.7949 3943.0185 S368s N372n N380n T391t TMT10 366 (R) SVsPESnDSISEELnHFKPIVCSPCtPPK (R) S(0.0)VS(0.99)PES(0.0)N(1.0)DS(0.0)IS(0.0)EELN(1.0)HFKPIVCS(0.0)PCT(0.99)PPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T RNF169 78277 9 15 729.1 236.14 HUMAN 3 -14.3149 -41.6873 PIVKSTLSQTVPSKG-p Q9NQW6;S339-p PIVKSTLSQTVPSKG 0.0837815603906397 0.00123561176676881 0.546666666666667 -0.975333333333333 23.0230880628111 47.6315877937228 0.546666666666667 -0.975333333333333 0.00498529880365622 1.7252070357808e-05 4.55988749984254 -14.1606067955298 Q9NQW6 ANLN Q9NQW6.S339.p_ANLN Q9NQW6_S339s _1_1_339_339 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14732.14732.3 15.5 10.15 2.178 6 1 1 0 710.0522 2048.1752 S339s TMT10 336 (K) STLsQTVPSKGELSR (E) S(0.0)T(0.0)LS(0.99)QT(0.0)VPS(0.0)KGELS(0.0)R K:TMT10,s:Phosphorylated S ANLN 125566 2 23 68.1 675.08 HUMAN 1 23.0231 -47.6316 PIVPPPMSPSSKSVS-p Q13409-2;S81-p PIVPPPMSPSSKSVS 0.111684031420699 0.0146276669764335 -0.298333333333333 -0.407333333333333 19.8837189933373 25.4106691578883 -0.298333333333333 -0.407333333333333 0.0102713635388686 0.00287695510136189 -3.85403953628633 -5.14198856238646 Q13409 DYNC1I2 Q13409.2.S81.p_DYNC1I2 Q13409-2_S81s _1_1_81_81 Q13409-2 Q13409-2|Q13409-3|Q13409-6 Isoform 2B of Cytoplasmic dynein 1 intermediate chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.36172.36778.4 25.51 21.57 1.378 6 1 1 0 833.6795 3251.7308 S81s TMT10 59 (R) EAEALLQSMGLTPESPIVPPPMsPSSK (S) EAEALLQS(0.0)MGLT(0.0)PES(0.0)PIVPPPMS(0.99)PS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S DYNC1I2 71042.8 40 5 1616.1 127.25 HUMAN 1 -19.8837 -25.4107 PIVSKSLSSSLDDTE-p O95292;S158-p PIVSKSLSSSLDDTE 0.3631429045758 0.00781484591907478 -0.130333333333333 -0.456 8.16961281815604 30.0608608075629 -0.130333333333333 -0.456 0.152418863207448 0.000986084016256804 -1.66457173979975 -6.4404262310399 O95292 VAPB O95292.S158.p_VAPB O95292_S158s _1_1_158_158 O95292 O95292 Vesicle-associated membrane protein-associated protein B/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16652.16953.3 14.5 14.5 1.132 5 1 1 0 726.0631 2096.2054 S158s TMT10 156 (K) SLsSSLDDTEVKK (V) S(0.0)LS(0.99)S(0.0)S(0.0)LDDT(0.0)EVKK K:TMT10,s:Phosphorylated S VAPB 27456.1 5 5 1400.1 146.44 HUMAN 1 -8.1696 -30.0609 PIVSRTRSWDSSSPV-p Q86WB0;S354-p PIVSRTRSWDSSSPV 0.113753456802484 0.0043036796371177 0.321333333333333 0.831333333333333 19.697342372056 34.7878603232116 0.321333333333333 0.831333333333333 0.0107217521298163 0.000332058015198977 3.81429574689927 8.01644296806518 Q86WB0 ZC3HC1 Q86WB0.S354.p_ZC3HC1 Q86WB0_S354s _1_1_354_354 Q86WB0 Q86WB0|Q86WB0-2|C9J0I9 Nuclear-interacting partner of ALK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10339.10339.3 19.49 19.49 4.592 7 1 1 0 784.6774 2272.0476 S354s Hydrogen 354 (R) sWDSSSPVDRPEPEAASPTTR (T) S(0.99)WDS(0.0)S(0.0)S(0.0)PVDRPEPEAAS(0.0)PT(0.0)T(0.0)R s:Phosphorylated S ZC3HC1 56401.6 7 7 624.1 258.98 HUMAN 1 19.6973 34.7879 PIVYGNLSL______-p Q00610-2;S1638-p PIVYGNLSL______ 0.433129032090172 0.571429639898807 0.118666666666667 0.0673333333333334 6.69319624528535 3.27644089520804 0.118666666666667 0.0673333333333334 0.214131409381796 0.47027935131709 1.40719456523249 0.77590762542578 Q00610 CLTC Q00610.2.S1638.p_CLTC Q00610-2_S1638s _1_1_1638_1638 Q00610-2 Q00610-2 Isoform 2 of Clathrin heavy chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26036.26036.4 15.03 12.75 3.125 6 1 1 0 1033.2914 4050.185 S1638s TMT10 1610 (K) VDKLDASESLRKEEEQATETQPIVYGNLsL (-) VDKLDAS(0.0)ES(0.0)LRKEEEQAT(0.0)ET(0.0)QPIVY(0.0)GNLS(0.99)L K:TMT10,s:Phosphorylated S CLTC 189655.7 1 9 1116.1 175.54 HUMAN 1 6.6932 3.2764 PIYKKAPTNEFYA__-p P31431;T193-p PIYKKAPTNEFYA__ 0.473186311260259 0.286474315595493 0.105333333333333 0.115333333333333 5.98615636996909 7.16231090055249 0.105333333333333 0.115333333333333 0.251990612995539 0.192206871531505 1.28209704949478 1.4889750627464 P31431 SDC4 P31431.T193.p_SDC4 P31431_T193t _1_1_193_193 P31431 P31431 Syndecan-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14497.14497.2 8.47 8.47 1.537 2 1 1 0 789.9044 1498.8306 T193t TMT10 190 (K) KAPtNEFYA (-) KAPT(0.99)NEFY(0.0)A K:TMT10,t:Phosphorylated T SDC4 21641.2 1 1 6960.1 8.47 HUMAN 1 5.9862 7.1623 PKADIDVSGPKVDVE-p Q09666;S1286-p PKADIDVSGPKVDVE 0.0905867676320554 0.485993149156764 -0.535666666666667 -0.181333333333333 22.1784496917415 4.18632949109461 -0.535666666666667 -0.181333333333333 0.00605557002869528 0.381388023373803 -4.36285590894029 -0.952416373889776 Q09666 AHNAK Q09666.S1286.p_AHNAK Q09666_S1286s _1_1_1286_1286 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14441.14441.2 10.63 10.63 99 1 1 1 0 720.3815 1359.7884 S1286s TMT10 1281 (K) ADIDVsGPK (V) ADIDVS(1.0)GPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 54 1.1 4313.36 HUMAN 1 -22.1784 -4.1863 PKADLDVSGPKVDVD-p Q09666;S3182-p PKADLDVSGPKVDVD 0.090424384916148 0.00682425892404742 -0.525666666666667 -0.468 22.2084004824731 31.0797966816795 -0.525666666666667 -0.468 0.006013951920652 0.000779866619727589 -4.36974855356221 -6.75628134783364 Q09666 AHNAK Q09666.S3182.p_AHNAK Q09666_S3182s _1_1_3182_3182 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25845.25845.5 21.22 21.66 99 1 1 1 0 667.1526 3251.7614 S3182s TMT10 3177 (K) ADLDVsGPKVDVDVPDVNIEGPDAK (L) ADLDVS(1.0)GPKVDVDVPDVNIEGPDAK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 79 1.1 4313.36 HUMAN 1 -22.2084 -31.0798 PKADLGVSGPKVDID-p Q09666;S1542-p PKADLGVSGPKVDID 0.126867028860092 0.882356650947653 -0.326333333333333 -0.0196666666666667 18.597290867966 0.763764199890833 -0.326333333333333 -0.0196666666666667 0.0138124561790689 0.838732708988944 -3.58417036533183 -0.213503741698786 Q09666 AHNAK Q09666.S1542.p_AHNAK Q09666_S1542s _1_1_1542_1542 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27653.27653.5 19.69 19.69 99 1 1 1 0 661.1564 3221.7872 S1542s TMT10 1537 (K) ADLGVsGPKVDIDVPDVNLEAPEGK (L) ADLGVS(1.0)GPKVDIDVPDVNLEAPEGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 3 58 1.1 4313.36 HUMAN 1 -18.5973 -0.7638 PKADVDVSGPKVDVE-p Q09666;S2926-p PKADVDVSGPKVDVE 0.990179909621423 0.147144465082663 0.00199999999999999 0.149333333333333 0.0884569199812628 10.9565417179489 0.00199999999999999 0.149333333333333 0.979838067189874 0.0802316692959776 0.0264610317624531 2.14753375721823 Q09666 AHNAK Q09666.S2926.p_AHNAK Q09666_S2926s _1_1_2926_2926 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22021.22021.4 12.05 12.05 99 1 1 1 0 823.1822 3209.7145 S2926s TMT10 2921 (K) ADVDVsGPKVDVEGPDVNIEGPEGK (L) ADVDVS(1.0)GPKVDVEGPDVNIEGPEGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 77 1.1 4313.36 HUMAN 1 0.0885 10.9565 PKADVVVSGPKVDIE-p Q09666;S1158-p PKADVVVSGPKVDIE 0.708335088412972 0.0320619890330899 -0.0773333333333333 0.411333333333333 2.81475155897854 20.1717153204046 -0.0773333333333333 0.411333333333333 0.523027885481366 0.00961232548147569 -0.682528368357024 3.91219862209923 Q09666 AHNAK Q09666.S1158.p_AHNAK Q09666_S1158s _1_1_1158_1158 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25460.25460.4 19.8 19.8 6.143 2 1 1 0 819.4443 3194.7763 S1158s TMT10 1153 (K) ADVVVsGPKVDIEAPDVSLEGPEGK (L) ADVVVS(0.99)GPKVDIEAPDVS(0.0)LEGPEGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 50 1.1 4313.36 HUMAN 1 -2.8148 20.1717 PKAESCGSFDETESE-p A8MXB7;S149-p PKAESCGSFDETESE 0.175973502111451 0.139219549693382 0.238333333333333 -0.266333333333333 15.003777355352 11.2823001211464 0.238333333333333 -0.266333333333333 0.031595284073603 0.0744337651551381 2.87915964826162 -2.20461824818205 A8MXB7 SNX24 A8MXB7.S149.p_SNX24 A8MXB7_S149s _1_1_149_149 A8MXB7 A8MXB7|Q9Y343|Q9Y343-2 Sorting nexin-24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10425.10425.2 19.83 19.83 2.489 6 1 1 0 1209.0101 2337.044 S149s TMT10 144 (K) AESCGsFDETESEESSK (L) AES(0.0)CGS(0.99)FDET(0.0)ES(0.0)EES(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SNX24 23842.1 5 1 4034.1 38.84 HUMAN 1 15.0038 -11.2823 PKAGLRVSAPEVSVG-p Q09666;S332-p PKAGLRVSAPEVSVG 0.0350618685416583 0.78201889786204 -0.611666666666667 -0.0293333333333333 33.874399286558 1.47808694514582 -0.611666666666667 -0.0293333333333333 0.000409788787625351 0.711526870196753 -7.70319615132856 -0.389804880661925 Q09666 AHNAK Q09666.S332.p_AHNAK Q09666_S332s _1_1_332_332 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14630.14630.3 14.07 14.07 4.786 2 1 1 0 682.3821 1965.1646 S332s TMT10 327 (K) AGLRVsAPEVSVGHK (G) AGLRVS(0.99)APEVS(0.0)VGHK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 17 1.1 4313.36 HUMAN 1 -33.8744 -1.4781 PKAHPPRSPPPRPQR-p Q6PJG9;S575-p PKAHPPRSPPPRPQR 0.881645931978374 0.0164943786358202 -0.0246666666666667 -0.350333333333333 1.07585313777606 24.6191810202964 -0.0246666666666667 -0.350333333333333 0.780575087163111 0.00345208831659827 -0.292798636172766 -4.94192312275743 Q6PJG9 LRFN4 Q6PJG9.S575.p_LRFN4 Q6PJG9_S575s _1_1_575_575 Q6PJG9 Q6PJG9 Leucine-rich repeat and fibronectin type-III domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3151.3151.4 11.74 11.74 99 1 1 1 0 451.2441 1721.9873 S575s TMT10 570 (K) AHPPRsPPPRPQR (S) AHPPRS(1.0)PPPRPQR s:Phosphorylated S LRFN4 67771.9 5 2 2562.1 78.45 HUMAN 1 -1.0759 -24.6192 PKAIDVKSPRKRKTR-p Q659C4;S633-p PKAIDVKSPRKRKTR 0.136969022162011 0.00645623305637878 0.471 -0.545 17.7111875494302 31.4912948387999 0.471 -0.545 0.0169387455836176 0.000709366240552836 3.40404931039898 -6.88736407040759 Q659C4 LARP1B Q659C4.S633.p_LARP1B Q659C4_S633s _1_1_633_633 Q659C4 Q659C4|Q659C4-2|Q659C4-9|Q659C4-5 La-related protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9953.9953.2 10.99 5.87 99 1 1 1 0 712.4081 1343.8411 S633s TMT10 628 (K) AIDVKsPR (K) AIDVKS(1.0)PR K:TMT10,s:Phosphorylated S LARP1B 105833.8 4 10 551.1 274.41 HUMAN 1 17.7112 -31.4913 PKALKGPSPEHHKPL-p Q96PX6;S278-p PKALKGPSPEHHKPL 0.202779372132916 0.118425282587106 -0.433666666666667 0.213666666666667 13.4452273401312 12.216083245038 -0.433666666666667 0.213666666666667 0.0452352782401746 0.0600332251526712 -2.59161256900955 2.36951395726792 Q96PX6 CCDC85A Q96PX6.S278.p_CCDC85A Q96PX6_S278s _1_1_278_278 Q96PX6 Q96PX6 Coiled-coil domain-containing protein 85A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6268.6268.4 13.66 13.66 99 1 1 1 0 539.2925 2074.1835 S278s TMT10 276 (K) GPsPEHHKPLCK (G) GPS(1.0)PEHHKPLCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CCDC85A 60659.2 2 2 1994.1 103.61 HUMAN 1 -13.4452 12.2161 PKAQGQESDSSETSV-p Q03164-3;S1056-p PKAQGQESDSSETSV 0.44321391319195 0.40284088560906 -0.102666666666667 0.0883333333333334 6.51355269253614 5.25215772890481 -0.102666666666667 0.0883333333333334 0.22317458237083 0.298389974343071 -1.37556460884767 1.14983058210997 Q03164 KMT2A Q03164.3.S1056.p_KMT2A Q03164-3_S1056s _1_1_1056_1056 Q03164-3 Q03164-3 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4524.4524.2 15.85 15.85 1.486 5 1 1 0 895.3962 1709.814 S1056s TMT10 1051 (K) AQGQEsDSSETSVR (G) AQGQES(0.99)DS(0.0)S(0.0)ET(0.0)S(0.0)VR s:Phosphorylated S KMT2A 436608.3 2 18 26.1 936.8 HUMAN 1 -6.5136 5.2522 PKAQWPQSEDEGPLN-p M0QXA7;S209-p PKAQWPQSEDEGPLN 0.797029118738497 0.0557983520109645 0.0403333333333333 -0.307 1.90105944436754 16.6982363669752 0.0403333333333333 -0.307 0.645496743425739 0.0213883047406802 0.486777723629755 -3.20104863743266 M0QXA7 WIZ M0QXA7.S209.p_WIZ M0QXA7_S209s _1_1_209_209 M0QXA7 M0QXA7|O95785-3 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32342.32342.4 25.03 25.03 7.881 4 1 1 0 1115.754 4380.0135 S209s TMT10 204 (K) AQWPQsEDEGPLNLTLDSDGGRELDCQLCGAWFETR (K) AQWPQS(0.99)EDEGPLNLT(0.0)LDS(0.0)DGGRELDCQLCGAWFET(0.0)R C:Carbamidomethylation,s:Phosphorylated S WIZ 104190.1 2 5 195.1 461.51 HUMAN 1 1.9011 -16.6982 PKARKRKSNEMEEDL-p Q96Q89-2;S1691-p PKARKRKSNEMEEDL 0.0898915602568078 0.00627667668004144 -0.65 -0.493333333333333 22.2815504493 31.713862333116 -0.65 -0.493333333333333 0.00591350481913674 0.000673928412938821 -4.38661136719642 -6.95913056296956 Q96Q89 KIF20B Q96Q89.2.S1691.p_KIF20B Q96Q89-2_S1691s _1_1_1691_1691 Q96Q89-2 Q96Q89-2|Q96Q89-3|Q96Q89-5 Isoform 2 of Kinesin-like protein KIF20B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11524.11524.3 12.93 7.67 99 1 1 1 0 749.0665 2165.2203 S1691s TMT10 1689 (K) RKsNEMEEDLVK (C) RKS(1.0)NEMEEDLVK K:TMT10,s:Phosphorylated S KIF20B 215641.1 2 13 486.1 295.59 HUMAN 1 -22.2816 -31.7139 PKASPVTSPAAAFPT-p F8VU39;S498-p PKASPVTSPAAAFPT 0.0521538298795559 0.00379965736081285 -0.501 -0.700666666666667 27.8687233325258 35.8736603044672 -0.501 -0.700666666666667 0.00163353207620807 0.00025860324462456 -5.80898931311734 -8.42146621452792 F8VU39 BAZ2A F8VU39.S498.p_BAZ2A F8VU39_S498s _1_1_498_498 F8VU39 Q9UIF9|F8VU39|Q9UIF9-3|Q9UIF9-2|J3KPG5 Bromodomain adjacent to zinc finger domain protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19417.19417.3 16.24 16.24 1.11 5 1 1 0 775.0757 2243.2436 S498s TMT10 493 (K) ASPVTsPAAAFPTASPANK (D) AS(0.0)PVT(0.0)S(0.99)PAAAFPT(0.0)AS(0.0)PANK K:TMT10,s:Phosphorylated S BAZ2A 212873.4 2 5 471.1 302.34 HUMAN 1 -27.8687 -35.8737 PKATVFKSPRTPPQR-p Q14CS0;S56-p PKATVFKSPRTPPQR 0.115277012680993 0.00356137322963082 -0.321666666666667 -0.608666666666667 19.5355921690353 36.5071775907842 -0.321666666666667 -0.608666666666667 0.0111286064172729 0.000223502425687283 -3.77998468705417 -8.66596855836876 Q14CS0 UBXN2B Q14CS0.S56.p_UBXN2B Q14CS0_S56s _1_1_56_56 Q14CS0 Q14CS0|E5RJ36|E5RGJ4 UBX domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10336.10336.3 7.69 4.16 6.249 2 1 1 0 481.9425 1363.8462 S56s TMT10 51 (K) ATVFKsPR (T) AT(0.0)VFKS(0.99)PR K:TMT10,s:Phosphorylated S UBXN2B 37190 2 2 2111.1 97.2 HUMAN 1 -19.5356 -36.5072 PKAVPGGSPKSPANG-p Q96DR7;S124-p PKAVPGGSPKSPANG 0.258179771699293 0.0348378824226807 -0.215 -0.275 11.1747194699924 19.6281275759995 -0.215 -0.275 0.0763006175512166 0.0108939967757303 -2.18674738457322 -3.79612496532735 Q96DR7 ARHGEF26 Q96DR7.S124.p_ARHGEF26 Q96DR7_S124s _1_1_124_124 Q96DR7 Q96DR7|Q96DR7-4|Q96DR7-3 Rho guanine nucleotide exchange factor 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22054.22054.5 24.33 21.69 1.106 3 1 1 0 687.3921 3352.9622 S124s TMT10 119 (K) AVPGGsPKSPANGAVTLPAPPPPPVLRPPR (T) AVPGGS(0.99)PKS(0.0)PANGAVT(0.0)LPAPPPPPVLRPPR K:TMT10,s:Phosphorylated S ARHGEF26 97914.4 6 4 478.1 300.31 HUMAN 1 -11.1747 -19.6281 PKCDKTVYFAEKVSS-p P52943;Y13-p PKCDKTVYFAEKVSS 0.422807784151987 0.312467152506031 -0.122 -0.107 6.88535548993694 6.67747729079004 -0.122 -0.107 0.204863435298364 0.214907845814653 -1.44092999735496 -1.40406044976608 P52943 CRIP2 P52943.Y13.p_CRIP2 P52943_Y13y _1_1_13_13 P52943 P52943 Cysteine-rich protein 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.18851.18933.2 7.28 7.28 7.278 2 1 1 0 698.3699 1315.7662 Y13y TMT10 11 (K) TVyFAEK (V) T(0.0)VY(0.99)FAEK K:TMT10,y:Phosphorylated Y CRIP2 23291.1 2 1 442.1 7.28 HUMAN 1 -6.8854 -6.6775 PKCFRSVSPERMSRR-p Q14966;S560-p PKCFRSVSPERMSRR 0.487457355899405 0.929641552337573 0.399333333333333 0.0306666666666667 5.75151225685629 0.447428055642144 0.399333333333333 0.0306666666666668 0.265979872998872 0.902105217047611 1.24016825814569 0.128870988555002 Q14966 ZNF638 Q14966.S560.p_ZNF638 Q14966_S560s _1_1_560_560 Q14966 Q14966|Q14966-3|Q14966-4|A0A096LPH6|Q14966-2 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5301.5301.3 8.22 8.22 1.212 3 1 1 0 453.2215 1277.6833 S560s TMT10 558 (R) SVsPERMSR (R) S(0.0)VS(0.99)PERMS(0.0)R s:Phosphorylated S ZNF638 222047.2 1 8 165.1 494.68 HUMAN 1 5.7515 0.4474 PKCLEAGSPEPEPAP-p D6W601;S34-p PKCLEAGSPEPEPAP 0.129811405438849 0.188411674756143 -0.272333333333333 0.157333333333333 18.3445780082741 9.5329795914667 -0.272333333333333 0.157333333333333 0.0146400378376724 0.111353030472241 -3.53233997869417 1.8999460597214 D6W601 ADAT3 D6W601.S34.p_ADAT3 D6W601_S34s _1_1_34_34 D6W601 D6W601|Q96EY9 HCG22695, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.33288.33288.3 23.83 22.04 11.948 2 1 1 0 1015.1793 2963.5589 S34s TMT10 29 (K) CLEAGsPEPEPAPWQALPVLSEK (Q) CLEAGS(0.99)PEPEPAPWQALPVLS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ADAT3 40527.9 5 1 5020.1 23.83 HUMAN 1 -18.3446 9.533 PKCNKEVYFAERVTS-p P50238;Y12-p PKCNKEVYFAERVTS 0.878259357397755 0.073959154667008 0.0296666666666667 -0.356 1.10913218810704 15.0101989337604 0.0296666666666667 -0.356 0.774616567052381 0.0315486010793971 0.301033429427853 -2.87848431202467 P50238 CRIP1 P50238.Y12.p_CRIP1 P50238_Y12y _1_1_12_12 P50238 P50238 Cysteine-rich protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.14908.15257.2 16.97 7.53 99 1 1 1 0 611.7893 1142.6043 Y12y TMT10 10 (K) EVyFAER (V) EVY(1.0)FAER y:Phosphorylated Y CRIP1 8932.1 2 1 210.1 16.97 HUMAN 1 1.1091 -15.0102 PKCYQEDSSEKAQKR-p Q9Y2K7;S680-p PKCYQEDSSEKAQKR 0.620504869032167 0.99229111578383 0.0816666666666667 -0.001 3.85308588720133 0.0484548018432085 0.0816666666666666 -0.001 0.411804806474835 0.988904879507069 0.888940602187414 -0.0145587859328329 Q9Y2K7 KDM2A Q9Y2K7.S680.p_KDM2A Q9Y2K7_S680s _1_1_680_680 Q9Y2K7 Q9Y2K7|I3VM54|Q9Y2K7-2|Q9Y2K7-3|Q9Y2K7-5|Q9Y2K7-4 Lysine-specific demethylase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6955.6955.2 12.31 12.31 1.104 3 1 1 0 842.37 1603.7674 S680s TMT10 675 (K) CYQEDsSEK (A) CY(0.0)QEDS(0.99)S(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KDM2A 135243.8 1 7 409.1 323.7 HUMAN 1 3.8531 -0.0485 PKDIYPYSDGEWPPQ-p Q9BQK8-2;S205-p PKDIYPYSDGEWPPQ 0.611969897277982 0.893673839455185 0.067 -0.0133333333333333 3.95445247444836 0.685280265984373 0.067 -0.0133333333333333 0.402304372286367 0.854027732132399 0.908413104154613 -0.192939381016035 Q9BQK8 LPIN3 Q9BQK8.2.S205.p_LPIN3 Q9BQK8-2_S205s _1_1_205_205 Q9BQK8-2 Q9BQK8-2 Isoform 2 of Phosphatidate phosphatase LPIN3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27277.27277.4 21.51 15.88 1.313 9 1 1 0 1041.2566 4082.0283 S205s TMT10 200 (K) DIYPYsDGEWPPQASLSAGELTSPKSDSELEVR (T) DIY(0.0)PY(0.0)S(0.99)DGEWPPQAS(0.0)LS(0.0)AGELT(0.0)S(0.0)PKS(0.0)DS(0.0)ELEVR K:TMT10,s:Phosphorylated S LPIN3 94213.1 4 3 1554.1 131.9 HUMAN 1 3.9545 -0.6853 PKDRRVGTPSQGPFL-p Q8IX03-2;T912-p PKDRRVGTPSQGPFL 0.450916708217697 0.0746083365323131 -0.112333333333333 -0.228333333333333 6.38653328026034 14.9633561112975 -0.112333333333333 -0.228333333333333 0.229798226149325 0.0318907247294264 -1.35314127691759 -2.86971440291572 Q8IX03 WWC1 Q8IX03.2.T912.p_WWC1 Q8IX03-2_T912t _1_1_912_912 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17342.17342.3 9.7 9.7 1.107 2 1 1 0 489.9252 1387.7895 T912t TMT10 910 (R) VGtPSQGPFLR (G) VGT(0.99)PS(0.0)QGPFLR t:Phosphorylated T WWC1 126701.1 2 15 312.1 370.85 HUMAN 1 -6.3865 -14.9634 PKDTCVQSPISSFPC-p A0A0J9YWL0;S892-p PKDTCVQSPISSFPC 0.0332552830156115 0.240697726864574 -0.840666666666667 -0.147333333333333 34.589394993669 8.14941442996132 -0.840666666666667 -0.147333333333333 0.000347584579333118 0.153129391592607 -7.95946493318116 -1.66053378966607 A0A0J9YWL0 NotFound A0A0J9YWL0.S892.p_NotFound A0A0J9YWL0_S892s _1_1_892_892 A0A0J9YWL0 A0A0J9YWL0|Q9Y4K1 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22699.22699.2 18.5 18.5 1.62 5 1 1 0 1247.0924 2413.2144 S892s TMT10 887 (K) DTCVQsPISSFPCTDLK (V) DT(0.0)CVQS(0.99)PIS(0.0)S(0.0)FPCT(0.0)DLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CRYBG1 233643.7 3 23 79.1 640.71 HUMAN 1 -34.5894 -8.1494 PKDVPNKSGAEKQTP-p O43493;S210-p PKDVPNKSGAEKQTP 0.675922624629322 0.970565621156644 -0.0626666666666667 0.00400000000000002 3.18866182397723 0.184313571685582 -0.0626666666666667 0.00400000000000003 0.479881289960679 0.958448192784802 -0.758477935702956 0.0545531614850228 O43493 TGOLN2 O43493.S210.p_TGOLN2 O43493_S210s _1_1_210_210 O43493 O43493|F8W8W7|J3KQ45|O43493-3|O43493-5|O43493-2 Trans-Golgi network integral membrane protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8001.8001.3 8.64 8.64 99 1 1 1 0 604.6663 1732.0208 S210s TMT10 205 (K) DVPNKsGAEK (Q) DVPNKS(1.0)GAEK K:TMT10,s:Phosphorylated S TGOLN2 51111.9 2 2 1252.1 161.84 HUMAN 1 -3.1887 0.1843 PKDVTVLSVAEEQDL-p Q14966;S1667-p PKDVTVLSVAEEQDL 0.168434261352573 0.838699280813853 -0.683666666666667 -0.0246666666666667 15.4423186589837 1.07385793061424 -0.683666666666667 -0.0246666666666667 0.0285606530880383 0.780933776225775 -2.96182741884243 -0.292274582615883 Q14966 ZNF638 Q14966.S1667.p_ZNF638 Q14966_S1667s _1_1_1667_1667 Q14966 Q14966|Q14966-3|Q14966-5 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30476.30476.3 16.54 11.17 4.199 2 1 1 0 733.0645 2117.2106 S1667s TMT10 1662 (K) DVTVLsVAEEQDLLK (Q) DVT(0.0)VLS(0.99)VAEEQDLLK K:TMT10,s:Phosphorylated S ZNF638 222047.2 3 22 165.1 494.68 HUMAN 1 -15.4423 -1.0739 PKDYVKFSDEEEFMN-p Q86UW6;S1325-p PKDYVKFSDEEEFMN 0.186612390913955 0.0621773708295257 -0.231333333333333 0.233333333333333 14.3324726856686 16.0568263689409 -0.231333333333333 0.233333333333333 0.0368767578416433 0.0247923310920571 -2.7541680207593 3.07692543385703 Q86UW6 N4BP2 Q86UW6.S1325.p_N4BP2 Q86UW6_S1325s _1_1_1325_1325 Q86UW6 Q86UW6|Q86UW6-2 NEDD4-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22018.22018.3 15.5 15.5 12.884 2 1 1 0 974.453 2841.3744 S1325s TMT10 1320 (K) DYVKFsDEEEFMNEDEK (E) DY(0.0)VKFS(0.99)DEEEFMNEDEK K:TMT10,s:Phosphorylated S N4BP2 200566.4 3 12 1216.1 165.62 HUMAN 1 -14.3325 16.0568 PKEIPSLSPTIPRQG-p Q9ULD5-3;S47-p PKEIPSLSPTIPRQG 0.077546229655755 0.321395098815261 -0.385333333333333 -0.135 23.7828925223552 6.51786901218268 -0.385333333333333 -0.135 0.00418514729791587 0.222952886185508 -4.74197959768012 -1.37597143633665 Q9ULD5 ZNF777 Q9ULD5.3.S47.p_ZNF777 Q9ULD5-3_S47s _1_1_47_47 Q9ULD5-3 Q9ULD5-3|Q9ULD5-2 Isoform 3 of Zinc finger protein 777 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21936.21936.3 15.85 12.93 1.714 3 1 1 0 506.943 1438.8467 S47s TMT10 42 (K) EIPSLsPTIPR (Q) EIPS(0.0)LS(0.99)PT(0.0)IPR s:Phosphorylated S ZNF777 95258 4 1 2050.1 100.48 HUMAN 1 -23.7829 -6.5179 PKEKAQPSSSEDELD-p Q5T5U3;S1430-p PKEKAQPSSSEDELD 0.400050219600656 0.338875429701368 0.149 -0.0996666666666666 7.34214041369335 6.22629063474041 0.149 -0.0996666666666667 0.184410633019976 0.238435510839445 1.52078010954905 -1.32445067406722 Q5T5U3 ARHGAP21 Q5T5U3.S1430.p_ARHGAP21 Q5T5U3_S1430sS1431sS1432s_3_3_1430_1432 Q5T5U3 Q5T5U3|A0A087WW76 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25833.25833.4 7.01 7.01 99 3 3 3 0 839.4097 3114.7129 S1430s S1431s S1432s TMT10 1425 (K) EKAQPsssEDELDNVFFKK (E) EKAQPS(1.0)S(1.0)S(1.0)EDELDNVFFKK K:TMT10,s:Phosphorylated S ARHGAP21 218696.3 1 30 148.1 512.52 HUMAN 1 7.3421 -6.2263 PKEKDDLSPQPLMTD-p Q5THJ4;S1138-p PKEKDDLSPQPLMTD 0.577756297444917 0.0464087076757773 -0.0846666666666667 0.244666666666667 4.38403324681655 17.8379858671062 -0.0846666666666667 0.244666666666667 0.364415361046523 0.0164513451239032 -0.989862251180346 3.42677705453673 Q5THJ4 VPS13D Q5THJ4.S1138.p_VPS13D Q5THJ4_S1138s _1_1_1138_1138 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21543.21543.3 16.12 16.12 4.06 2 1 1 0 820.4045 2379.2266 S1138s TMT10 1133 (K) EKDDLsPQPLMTDFER (S) EKDDLS(0.99)PQPLMT(0.0)DFER K:TMT10,s:Phosphorylated S VPS13D 495672.3 3 8 124.1 545.31 HUMAN 1 -4.384 17.838 PKELDTRSLKEENFI-p Q8WXG6;S1110-p PKELDTRSLKEENFI 0.583395195139055 0.0822101506802639 0.0943333333333333 0.197666666666667 4.30618454274969 14.3781168995517 0.0943333333333334 0.197666666666667 0.371006523273559 0.0364912138494723 0.975223014600534 2.76089896124367 Q8WXG6 MADD Q8WXG6.S1110.p_MADD Q8WXG6_S1110s _1_1_1110_1110 Q8WXG6 Q8WXG6|Q8WXG6-7 MAP kinase-activating death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32576.32576.4 21.04 21.04 11.343 2 1 1 0 672.8724 2608.4954 S1110s TMT10 1110 (R) sLKEENFIASIELWNK (H) S(0.99)LKEENFIAS(0.0)IELWNK K:TMT10,s:Phosphorylated S MADD 184612.2 5 10 546.1 275.73 HUMAN 1 4.3062 14.3781 PKEPAPPSPESHSPR-p Q8NC06-2;S166-p PKEPAPPSPESHSPR 0.928133198175071 0.153166796080988 -0.015 -0.159666666666667 0.641547639908172 10.7159492355813 -0.015 -0.159666666666667 0.862671073886341 0.0848018011262877 -0.181378364149681 -2.10549611831074 Q8NC06 ACBD4 Q8NC06.2.S166.p_ACBD4 Q8NC06-2_S166s _1_1_166_166 Q8NC06-2 Q8NC06-2|K7EM05 Isoform 2 of Acyl-CoA-binding domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17140.17140.4 22.92 19.17 2.348 4 1 1 0 976.2373 3821.9533 S166s TMT10 142 (K) EQVVNGDVGAVSEPPCLPKEPAPPsPESHSPR (D) EQVVNGDVGAVS(0.0)EPPCLPKEPAPPS(0.99)PES(0.0)HS(0.0)PR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ACBD4 34983.4 4 1 1641.1 124.62 HUMAN 1 -0.6415 -10.7159 PKERSPQSPGGNICH-p Q9H609;S23-p PKERSPQSPGGNICH 0.666844539596398 0.0177352557940161 -0.0846666666666667 -0.362333333333333 3.28852914235581 24.1240122416131 -0.0846666666666668 -0.362333333333333 0.468972185574181 0.00386900041084659 -0.77843056680612 -4.81954031615195 Q9H609 ZNF576 Q9H609.S23.p_ZNF576 Q9H609_S23s _1_1_23_23 Q9H609 Q9H609 Zinc finger protein 576 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12455.12455.3 20.98 18.12 2.397 2 1 1 0 720.0331 2078.1217 S23s TMT10 20 (R) SPQsPGGNICHLGAPK (C) S(0.0)PQS(0.99)PGGNICHLGAPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF576 19403.6 2 2 4274.1 34.41 HUMAN 1 -3.2885 -24.124 PKEVEEDSEDEEMSE-p P19338;S28-p PKEVEEDSEDEEMSE 0.540978064798655 0.00584944636792358 0.092 1.05833333333333 4.92274221865261 32.2747882509224 0.092 1.05833333333333 0.321903558864046 0.000592271963592246 1.08988100406315 7.14275407366904 P19338 NCL P19338.S28.p_NCL P19338_S28sS34s_2_2_28_34 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20178.20178.5 28.6 28.6 3.32 4 2 2 0 1028.6749 4979.3843 S28s S34s TMT10 17 (K) MAPPPKEVEEDsEDEEMsEDEEDDSSGEEVVIPQKK (G) MAPPPKEVEEDS(0.99)EDEEMS(0.99)EDEEDDS(0.0)S(0.0)GEEVVIPQKK K:TMT10,s:Phosphorylated S NCL 76670.1 9 23 114.1 570.88 HUMAN 1 4.9227 32.2748 PKFSIGDSPDSSTPK-p Q9NYZ3;S461-p PKFSIGDSPDSSTPK 0.896771225701303 0.00238856624082869 -0.031 -0.829 0.927735551995487 40.2259466019691 -0.031 -0.829 0.80765603914132 9.49304063338989e-05 -0.255652112310725 -10.2334604797045 Q9NYZ3 GTSE1 Q9NYZ3.S461.p_GTSE1 Q9NYZ3_S461s _1_1_461_461 Q9NYZ3 Q9NYZ3 G2 and S phase-expressed protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18184.18184.2 12.94 12.94 2.01 5 1 1 0 938.4611 1795.9478 S461s TMT10 456 (K) FSIGDsPDSSTPK (L) FS(0.0)IGDS(0.99)PDS(0.0)S(0.0)T(0.0)PK K:TMT10,s:Phosphorylated S GTSE1 77156.9 4 9 271.1 394.28 HUMAN 1 -0.9277 -40.2259 PKGADPESPRREEMG-p Q68DA7-5;S365-p PKGADPESPRREEMG 0.0821409724815468 0.00481148783311339 -0.440333333333333 -0.591666666666667 23.1917240405822 33.8437831371239 -0.440333333333333 -0.591666666666667 0.0047954304423939 0.000412687853179354 -4.59989766891219 -7.67811567604205 Q68DA7 FMN1 Q68DA7.5.S365.p_FMN1 Q68DA7-5_S365s _1_1_365_365 Q68DA7-5 Q68DA7-5|Q68DA7-3 Isoform 5 of Formin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9788.9788.5 26.43 16.84 3.15 4 1 1 0 936.2496 4597.2614 S365s TMT10 360 (K) GADPEsPRREEMGCNADQESQSGPGVPQTQGGEVKPK (S) GADPES(0.99)PRREEMGCNADQES(0.0)QS(0.0)GPGVPQT(0.0)QGGEVKPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FMN1 132895.4 4 8 727.1 236.56 HUMAN 1 -23.1917 -33.8438 PKGALPPSPALPRPS-p Q8N3V7-2;S610-p PKGALPPSPALPRPS 0.407878856431238 0.776581404979675 0.169333333333333 -0.0313333333333333 7.19154221679054 1.51911239155536 0.169333333333333 -0.0313333333333333 0.190917517376947 0.704837108430715 1.4945017720921 -0.399418188779173 Q8N3V7 SYNPO Q8N3V7.2.S610.p_SYNPO Q8N3V7-2_S610s _1_1_610_610 Q8N3V7-2 Q8N3V7|Q8N3V7-2|Q8N3V7-3 Isoform 2 of Synaptopodin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13603.13817.3 8.03 8.03 3.118 2 1 1 0 575.6518 1644.9747 S610s TMT10 605 (K) GALPPsPALPRPSR (S) GALPPS(0.99)PALPRPS(0.0)R s:Phosphorylated S SYNPO 96794.1 2 11 947.1 196.99 HUMAN 1 7.1915 -1.5191 PKGASLKSPLPSQ__-p Q86TS9;S118-p PKGASLKSPLPSQ__ 0.473939665716417 0.0219973880959178 0.0963333333333333 0.328666666666667 5.97163741297975 22.6501703837954 0.0963333333333334 0.328666666666667 0.252834455934128 0.00543229018940349 1.27950935909615 4.4673064296814 Q86TS9 MRPL52 Q86TS9.S118.p_MRPL52 Q86TS9_S118s _1_1_118_118 Q86TS9 Q86TS9|Q86TS9-3|Q86TS9-2|G3V3U6 39S ribosomal protein L52, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14788.14788.2 8.61 8.61 1.203 3 1 1 0 811.9506 1542.9256 S118s TMT10 113 (K) GASLKsPLPSQ (-) GAS(0.0)LKS(0.99)PLPS(0.0)Q K:TMT10,s:Phosphorylated S MRPL52 13720.5 2 1 6936.1 8.61 HUMAN 1 5.9716 22.6502 PKGHSERSDTNEKRS-p P30414;S263-p PKGHSERSDTNEKRS 0.0507410919483046 0.334111385869275 1.30666666666667 -0.341666666666667 28.4677615370577 6.31018430148226 1.30666666666667 -0.341666666666667 0.00142306208009994 0.233873798756553 5.97914779967446 -1.33930361040156 P30414 NKTR P30414.S263.p_NKTR P30414_S263s _1_1_263_263 P30414 P30414 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3074.3074.4 9.56 9.56 1.594 3 1 1 0 489.2453 1873.9881 S263s TMT10 258 (K) GHSERsDTNEKR (S) GHS(0.0)ERS(0.99)DT(0.0)NEKR K:TMT10,s:Phosphorylated S NKTR 166700.6 1 3 202.1 449.45 HUMAN 1 28.4678 -6.3102 PKGILHLSPDVYQEM-p Q9NUL3;S416-p PKGILHLSPDVYQEM 0.778321298351263 0.0104679227872567 0.0586666666666667 -0.410666666666667 2.09052630105494 27.7758070544882 0.0586666666666667 -0.410666666666667 0.617941510175686 0.00166885765263466 0.528757699008556 -5.77466081620804 Q9NUL3 STAU2 Q9NUL3.S416.p_STAU2 Q9NUL3_S416s _1_1_416_416 Q9NUL3 Q9NUL3|A0A0A0MTC5|Q9NUL3-2|E9PH62|E7EVJ4|Q9NUL3-7|A0A0A0MTC6|E7EPX0|Q9NUL3-3|F8VPI7|Q9NUL3-8|A0A0A0MTD1|Q9NUL3-6|A0A0A0MTC4|Q9NUL3-4|G5EA18 Double-stranded RNA-binding protein Staufen homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24266.24266.3 17.51 17.51 6.129 3 1 1 0 752.032 2174.1113 S416s TMT10 411 (K) GILHLsPDVYQEMEASR (H) GILHLS(0.99)PDVY(0.0)QEMEAS(0.0)R s:Phosphorylated S STAU2 62867.6 3 5 1170.1 170.28 HUMAN 1 2.0905 -27.7758 PKGKWNSSNGVEEKE-p Q15554;S456-p PKGKWNSSNGVEEKE 0.273316345910785 0.518246763658541 -0.219 0.074 10.6679544080645 3.83455147557066 -0.219 0.0740000000000001 0.0857441617951958 0.413566023821079 -2.09803436118139 0.885223437779979 Q15554 TERF2 Q15554.S456.p_TERF2 Q15554_S456s_1_1_456_456 Q15554 Q15554 Telomeric repeat-binding factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11149.11149.3 7.4 7.4 1.428 2 1 1 0 701.6957 2022.1223 S456s N457n TMT10 451 (K) GKWNSsnGVEEK (E) GKWN(0.0)S(0.0)S(0.99)N(0.99)GVEEK K:TMT10,s:Phosphorylated S,n:Deamidated TERF2 59763.6 1 5 2594.1 77.28 HUMAN 1 -10.668 3.8346 PKGQDRWSQEDMLTL-p P17480;S23-p PKGQDRWSQEDMLTL 0.0948890980790693 0.00389142811872595 0.333666666666667 0.597333333333333 21.7062976332906 35.5732869836521 0.333666666666667 0.597333333333333 0.00675103308991664 0.000277122189493466 4.25508827787343 8.30767309742588 P17480 UBTF P17480.S23.p_UBTF P17480_S23s _1_1_23_23 P17480 P17480|E9PKP7|P17480-2 Nucleolar transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.32782.32782.3 16.58 16.58 3.653 2 1 1 0 926.7729 2698.3403 S23s TMT10 18 (K) GQDRWsQEDMLTLLECMK (N) GQDRWS(0.99)QEDMLT(0.0)LLECMK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UBTF 89746.7 3 1 1312.1 155.17 HUMAN 1 21.7063 35.5733 PKGRVFVSPLAKKLA-p P10515;S358-p PKGRVFVSPLAKKLA 0.474773316010134 0.008162639188537 -0.111333333333333 -0.443666666666667 5.95962904560743 29.7376448647731 -0.111333333333333 -0.443666666666667 0.25353451787859 0.00106227146014353 -1.27736848016129 -6.34275878263273 P10515 DLAT P10515.S358.p_DLAT P10515_S358s _1_1_358_358 P10515 P10515|E9PEJ4 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17852.17852.2 7.53 7.53 99 1 1 1 0 585.3311 1089.6869 S358s Hydrogen 355 (R) VFVsPLAK (K) VFVS(1.0)PLAK K:TMT10-Lys-Only,s:Phosphorylated S DLAT 69508.9 2 3 2952.1 64.89 HUMAN 1 -5.9596 -29.7376 PKGTRDLSPQHMVVR-p P49590;S67-p PKGTRDLSPQHMVVR 0.263054148508799 0.0310284338356459 0.166333333333333 0.277 10.9995323230765 20.3842051250074 0.166333333333333 0.277 0.0794413777830036 0.00915333774499326 2.15602741126278 3.95809947439308 P49590 HARS2 P49590.S67.p_HARS2 P49590_S67s _1_1_67_67 P49590 P49590|P49590-2 Probable histidine--tRNA ligase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12781.12781.2 15.34 12.01 99 1 1 1 0 745.8732 1410.7725 S67s TMT10 65 (R) DLsPQHMVVR (E) DLS(1.0)PQHMVVR s:Phosphorylated S HARS2 57629 14 2 2851.1 68.07 HUMAN 1 10.9995 20.3842 PKGTRDYSPRQMAVR-p P12081;S66-p PKGTRDYSPRQMAVR 0.730894346996865 0.445249657155852 -0.0816666666666667 0.177 2.58438698278573 4.67952028653067 -0.0816666666666667 0.177 0.551520045282305 0.340445792622434 -0.634654135616116 1.04478720048303 P12081 HARS P12081.S66.p_HARS P12081_S66s _1_1_66_66 P12081 P12081|P12081-4|B4DDD8 Histidine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3807.3807.3 8.84 6.86 4.251 3 1 1 0 420.8683 1180.6272 S66s TMT10 61 (K) GTRDYsPR (Q) GT(0.0)RDY(0.0)S(0.99)PR s:Phosphorylated S HARS 57980 1 3 2178.1 94.48 HUMAN 1 -2.5844 4.6795 PKGVSSNSPKPGSED-p P53804;S1278-p PKGVSSNSPKPGSED 0.544947039505364 0.0108314893502606 0.115666666666667 -0.446 4.8679209843686 27.5420410914744 0.115666666666667 -0.446 0.325992719969069 0.00176114814979684 1.07979742908213 -5.70968183005232 P53804 TTC3 P53804.S1278.p_TTC3 P53804_S1278s _1_1_1278_1278 P53804 P53804|P53804-2|P53804-3 E3 ubiquitin-protein ligase TTC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9230.9230.3 8.88 8.88 1.118 5 1 1 0 835.4274 2424.2974 S1278s TMT10 1273 (K) GVSSNsPKPGSEDANYK (R) GVS(0.0)S(0.0)NS(0.99)PKPGS(0.0)EDANY(0.0)K K:TMT10,s:Phosphorylated S TTC3 233002.8 2 3 2735.1 72.28 HUMAN 1 4.8679 -27.542 PKHQSDPSEDEDERS-p Q96BR1;S129-p PKHQSDPSEDEDERS 0.555446041036349 0.00640640517069216 0.14 0.517666666666667 4.71557279468811 31.546612226416 0.14 0.517666666666667 0.337631315223826 0.000700388130317878 1.05166773055663 6.90514375809901 Q96BR1 SGK3 Q96BR1.S129.p_SGK3 Q96BR1_S129s _1_1_129_129 Q96BR1 Q96BR1|Q96BR1-2 Serine/threonine-protein kinase Sgk3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4064.4064.3 18.4 13.67 1.594 4 1 1 0 804.696 2332.1053 S129s TMT10 124 (K) HQSDPsEDEDERSSQK (L) HQS(0.0)DPS(0.99)EDEDERS(0.0)S(0.0)QK K:TMT10,s:Phosphorylated S SGK3 57449.4 2 2 3364.1 52.81 HUMAN 1 4.7156 31.5466 PKHSGKTTPDIIKDW-p Q7Z2Z1;T1678-p PKHSGKTTPDIIKDW 0.119734359453001 0.000952253650599092 -0.370333333333333 -1.25433333333333 19.1815052135854 53.4702696100189 -0.370333333333333 -1.25433333333333 0.0120739529357479 4.49751933426113e-06 -3.70545267600722 -18.2279563610425 Q7Z2Z1 TICRR Q7Z2Z1.T1678.p_TICRR Q7Z2Z1_T1678t _1_1_1678_1678 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9651.9651.4 8.36 6.81 1.136 3 1 1 0 491.7852 1884.1522 T1678t TMT10 1673 (K) HSGKTtPDIIK (D) HS(0.0)GKT(0.0)T(0.99)PDIIK K:TMT10,t:Phosphorylated T TICRR 212850 2 22 238.1 417.32 HUMAN 1 -19.1815 -53.4703 PKHVLSGSPEHFQKH-p Q96PX6;S313-p PKHVLSGSPEHFQKH 0.572624308251996 0.195333746518962 -0.0793333333333334 0.151 4.45903368088412 9.32531872681273 -0.0793333333333333 0.151 0.358176123570407 0.116806800271795 -1.00391867129124 1.86399581717175 Q96PX6 CCDC85A Q96PX6.S313.p_CCDC85A Q96PX6_S313s _1_1_313_313 Q96PX6 Q96PX6 Coiled-coil domain-containing protein 85A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10526.10526.3 15.85 15.85 2.203 2 1 1 0 635.3332 1824.0168 S313s TMT10 308 (K) HVLSGsPEHFQK (H) HVLS(0.0)GS(0.99)PEHFQK K:TMT10,s:Phosphorylated S CCDC85A 60659.2 4 4 1994.1 103.61 HUMAN 1 -4.459 9.3253 PKIDQKKSPYGLWIP-p Q9BUV0;S282-p PKIDQKKSPYGLWIP 0.145835187369471 0.0512013633966045 -0.298 0.351 17.03393792651 17.2284562195916 -0.298 0.351 0.0197973110817319 0.0189301640690597 -3.26932216021845 3.3052065576034 Q9BUV0 RSRP1 Q9BUV0.S282.p_RSRP1 Q9BUV0_S282s _1_1_282_282 Q9BUV0 Q9BUV0 Arginine/serine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.38338.38338.2 10.92 10.92 2.418 2 1 1 0 677.8557 1274.7346 S282s TMT10 282 (K) sPYGLWIPI (-) S(0.99)PY(0.0)GLWIPI s:Phosphorylated S RSRP1 33669.8 2 4 2709.1 73.23 HUMAN 1 -17.0339 17.2285 PKIEDVGSDEEDDSG-p P08238;S255-p PKIEDVGSDEEDDSG 0.156418052714638 0.610140206274397 -0.371333333333333 -0.095 16.1701208602447 2.91505429107609 -0.371333333333333 -0.095 0.0241539361527972 0.511086689911818 -3.10092377334427 -0.703008341542995 P08238 HSP90AB1 P08238.S255.p_HSP90AB1 P08238_S255s _1_1_255_255 P08238 P08238|Q58FF8 Heat shock protein HSP 90-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10493.10493.5 21.19 16.88 14.144 2 1 1 0 644.7449 3139.7343 S255s TMT10 250 (K) IEDVGsDEEDDSGKDKKK (K) IEDVGS(0.99)DEEDDS(0.0)GKDKKK K:TMT10,s:Phosphorylated S HSP90AB1 83605 48 27 43.2 810.87 HUMAN 1 -16.1701 -2.9151 PKIGFPWSEIRNISF-p P15311;S243-p PKIGFPWSEIRNISF 0.295665949140035 0.0907903332036828 0.147333333333333 0.185666666666667 9.96386654434042 13.7835235254346 0.147333333333333 0.185666666666667 0.100835474332212 0.0418453926601518 1.97543350738701 2.65169743471235 P15311 EZR P15311.S243.p_EZR P15311_S243s _1_1_243_243 P15311 P35241-5|P15311|E7EQR4 Ezrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31181.31181.2 8.92 6.18 99 1 1 1 0 707.3621 1333.7466 S243s TMT10 238 (K) IGFPWsEIR (N) IGFPWS(1.0)EIR s:Phosphorylated S EZR 69525.7 1 2 2031.1 101.61 HUMAN 1 9.9639 13.7835 PKIHLAQSLHKLSTA-p P55060;S931-p PKIHLAQSLHKLSTA 0.626199485405885 0.0622508425390611 0.0766666666666667 -0.231 3.77575151346023 16.0495303895859 0.0766666666666667 -0.231 0.419203450449812 0.0248340162545024 0.874014044154153 -3.07552492221976 P55060 CSE1L P55060.S931.p_CSE1L P55060_S931s _1_1_931_931 P55060 P55060|P55060-3|P55060-4 Exportin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12119.12119.3 12.33 12.33 99 1 1 1 0 528.9719 1504.9364 S931s TMT10 926 (K) IHLAQsLHK (L) IHLAQS(1.0)LHK K:TMT10,s:Phosphorylated S CSE1L 111213.3 1 2 3744.1 44.06 HUMAN 1 3.7758 -16.0495 PKIHRSASEPSLNRA-p P15056;S729-p PKIHRSASEPSLNRA 0.868826411250003 0.204036803584193 0.0316666666666667 0.136333333333333 1.19182869111265 9.08223893725232 0.0316666666666667 0.136333333333333 0.760006192464113 0.123531042429682 0.321327817928607 1.82193796441759 P15056 BRAF P15056.S729.p_BRAF P15056_S729s _1_1_729_729 P15056 P15056 Serine/threonine-protein kinase B-raf HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6612.6612.3 8.99 8.99 3.666 3 1 1 0 423.8726 1189.6374 S729s TMT10 727 (R) SAsEPSLNR (A) S(0.0)AS(0.99)EPS(0.0)LNR s:Phosphorylated S BRAF 85177.1 5 26 441.1 311.96 HUMAN 1 1.1918 9.0822 PKIITKNSPLPSSII-p Q9BX63;S956-p PKIITKNSPLPSSII 0.290079611219067 0.00608892743356031 0.148666666666667 -0.544333333333333 10.1297907927331 31.9686736699361 0.148666666666667 -0.544333333333333 0.0970556719538385 0.000635524990776531 2.00426885237402 -7.04205255817802 Q9BX63 BRIP1 Q9BX63.S956.p_BRIP1 Q9BX63_S956s _1_1_956_956 Q9BX63 Q9BX63|Q9BX63-2|J3QSE8 Fanconi anemia group J protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21520.21520.3 13.58 13.58 1.581 5 1 1 0 722.0876 2084.2843 S956s TMT10 951 (K) IITKNsPLPSSIISR (K) IIT(0.0)KNS(0.99)PLPS(0.0)S(0.0)IIS(0.0)R K:TMT10,s:Phosphorylated S BRIP1 142871.9 1 6 837.1 214.97 HUMAN 1 10.1298 -31.9687 PKINRSASEPSLHRA-p P04049-2;S641-p PKINRSASEPSLHRA 0.171158122502722 0.443280483257162 0.217 -0.072 15.2890708829011 4.70444686133834 0.217 -0.072 0.0295864536291168 0.33849738180056 2.9328445433082 -1.04940545565868 P04049 RAF1 P04049.2.S641.p_RAF1 P04049-2_S641s _1_1_641_641 P04049-2 P04049-2|Q96II5|P10398 Isoform 2 of RAF proto-oncogene serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4479.4479.2 12.84 5.5 1.298 3 1 1 0 646.8124 1212.6534 S641s TMT10 639 (R) SAsEPSLHR (A) S(0.0)AS(0.99)EPS(0.0)LHR s:Phosphorylated S RAF1 76249.7 7 10 441.4 311.96 HUMAN 1 15.2891 -4.7044 PKIQDQDSPREQNKH-p E9PKB1;S709-p PKIQDQDSPREQNKH 0.422807784151987 0.0294212633715952 0.129333333333333 -0.313333333333333 6.8865443294213 20.7258069317582 0.129333333333333 -0.313333333333333 0.204807363573009 0.00846095347229251 1.44113841702453 -4.03252745672007 E9PKB1 NotFound E9PKB1.S709.p_NotFound E9PKB1_S709s _1_1_709_709 E9PKB1 E9PKB1|Q0P6D6 Coiled-coil domain-containing protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6010.6010.3 12.96 8.18 99 1 1 1 0 666.002 1916.0238 S709s TMT10 704 (K) IQDQDsPREQNK (H) IQDQDS(1.0)PREQNK K:TMT10,s:Phosphorylated S CCDC15 112563.1 2 2 4759.1 26.96 HUMAN 1 6.8865 -20.7258 PKIQQQFSDLKRKLA-p O94906;S143-p PKIQQQFSDLKRKLA 0.632763904312138 0.0931424736380334 -0.0693333333333333 -0.181666666666667 3.70367241408642 13.6341813109244 -0.0693333333333334 -0.181666666666667 0.426218953670435 0.0433093702591763 -0.860044842716568 -2.62447080803409 O94906 PRPF6 O94906.S143.p_PRPF6 O94906_S143s _1_1_143_143 O94906 O94906|O94906-2 Pre-mRNA-processing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19575.19575.2 8.8 4.47 99 1 1 1 0 822.9437 1564.9099 S143s TMT10 138 (K) IQQQFsDLK (R) IQQQFS(1.0)DLK K:TMT10,s:Phosphorylated S PRPF6 107721.8 1 1 1650.1 123.56 HUMAN 1 -3.7037 -13.6342 PKIRNLASPNCVKPK-p Q8NG27;S265-p PKIRNLASPNCVKPK 0.0995388440058061 0.00653824583586406 -0.450333333333333 -0.629666666666667 21.195712254748 31.4107372355567 -0.450333333333333 -0.629666666666667 0.00759326880784369 0.000722647120400746 -4.14039250297271 -6.86153933773268 Q8NG27 PJA1 Q8NG27.S265.p_PJA1 Q8NG27_S265s _1_1_265_265 Q8NG27 Q8NG27|Q8NG27-3 E3 ubiquitin-protein ligase Praja-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11912.11912.4 12.94 12.94 99 1 1 1 0 499.5329 1915.1402 S265s TMT10 262 (R) NLAsPNCVKPK (I) NLAS(1.0)PNCVKPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PJA1 71742.9 3 1 5406.1 19.61 HUMAN 1 -21.1957 -31.4107 PKKEIPASPSRTKIP-p Q9NYZ3;S243-p PKKEIPASPSRTKIP 0.338303322331957 0.00112205987963851 -0.134666666666667 -1.19666666666667 8.75698355806995 49.3216157422748 -0.134666666666667 -1.19666666666667 0.133137882128109 1.16906437325543e-05 -1.76629645822738 -15.2379892007601 Q9NYZ3 GTSE1 Q9NYZ3.S243.p_GTSE1 Q9NYZ3_S243s _1_1_243_243 Q9NYZ3 Q9NYZ3 G2 and S phase-expressed protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11527.11527.5 11.5 8.87 2 4 1 1 0 684.4108 3338.0544 S243s TMT10 228 (R) SIPGAAEKPKKEIPAsPSRTK (I) S(0.0)IPGAAEKPKKEIPAS(0.99)PS(0.0)RT(0.0)K K:TMT10,s:Phosphorylated S GTSE1 77156.9 9 5 271.1 394.28 HUMAN 1 -8.757 -49.3216 PKKERARSPDLGPQE-p Q8IWY8;S153-p PKKERARSPDLGPQE 0.207329300357563 0.703522649556197 0.191 0.0396666666666667 13.2053310192015 2.09916767430454 0.191 0.0396666666666667 0.0478042928334286 0.616713183663562 2.54813315137109 0.53059038554613 Q8IWY8 ZSCAN29 Q8IWY8.S153.p_ZSCAN29 Q8IWY8_S153s _1_1_153_153 Q8IWY8 Q8IWY8|Q8IWY8-2|Q8IWY8-3|C9K0J8|Q8IWY8-4|A0A0C4DGM2 Zinc finger and SCAN domain-containing protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8735.8735.3 15.29 13.24 99 1 1 1 0 659.6539 1896.9799 S153s Hydrogen 151 (R) ARsPDLGPQEQMNPK (E) ARS(1.0)PDLGPQEQMNPK K:TMT10-Lys-Only,s:Phosphorylated S ZSCAN29 98200.7 7 95 240.43 415.72 HUMAN 1 13.2053 2.0992 PKKIKGSSPGIQDTL-p Q9UNX4;S241-p PKKIKGSSPGIQDTL 0.947132919527183 0.192155792571014 -0.0113333333333333 0.132333333333333 0.467490117068176 9.41776550372902 -0.0113333333333333 0.132333333333333 0.897947588153601 0.114346651045526 -0.134394986567148 1.87999730627929 Q9UNX4 WDR3 Q9UNX4.S241.p_WDR3 Q9UNX4_S241s _1_1_241_241 Q9UNX4 Q9UNX4 WD repeat-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22111.22111.2 20.21 16.87 1.429 4 1 1 0 1523.1628 2965.3384 S241s TMT10 239 (K) GSsPGIQDTLEAEDGAFETDEAPEDR (I) GS(0.0)S(0.99)PGIQDT(0.0)LEAEDGAFET(0.0)DEAPEDR s:Phosphorylated S WDR3 107181 9 2 1488.1 137.64 HUMAN 1 -0.4675 9.4178 PKKKEHGSLPQQTTL-p O95208-2;S270-p PKKKEHGSLPQQTTL 0.583505940312618 0.584574153901543 -0.0743333333333333 0.0713333333333334 4.30479190574907 3.14890271219859 -0.0743333333333333 0.0713333333333334 0.371125511720971 0.484294713958884 -0.974960668774024 0.750388839930958 O95208 EPN2 O95208.2.S270.p_EPN2 O95208-2_S270s _1_1_270_270 O95208-2 O95208|O95208-2|O95208-3|E9PBC1|O95208-5 Isoform 2 of Epsin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32570.32570.3 17.41 13.34 1.115 5 1 1 0 1115.2394 3263.7346 S270s TMT10 267 (K) EHGsLPQQTTLLDLMDALPSSGPAAQK (A) EHGS(0.99)LPQQT(0.0)T(0.0)LLDLMDALPS(0.0)S(0.0)GPAAQK K:TMT10,s:Phosphorylated S EPN2 62355.6 2 5 1459.1 140.33 HUMAN 1 -4.3048 3.1489 PKKKLGVSVSPSRAR-p E7ERS3;S556-p PKKKLGVSVSPSRAR 0.880959558381171 0.409375565038376 0.0226666666666667 0.0836666666666667 1.08225603015588 5.16128433703343 0.0226666666666667 0.0836666666666667 0.779425117266138 0.304699377033805 0.294386095594163 1.13329845031673 E7ERS3 ZC3H18 E7ERS3.S556.p_ZC3H18 E7ERS3_S556sS558s_2_2_556_558 E7ERS3 E7ERS3|Q86VM9|Q86VM9-2 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13889.13889.4 7.78 7.78 3.417 3 2 2 0 412.721 1487.931 S556s S558s TMT10 552 (K) KLGVsVsPSR (A) KLGVS(0.99)VS(0.99)PS(0.0)R K:TMT10,s:Phosphorylated S ZC3H18 109165.8 6 27 157.1 499.97 HUMAN 1 1.0823 5.1613 PKKMHSRSQDKLDKD-p A0A096LNH6;S1702-p PKKMHSRSQDKLDKD 0.406679005771884 0.0823409353972692 0.138 0.284666666666667 7.21584014156753 14.366825230306 0.138 0.284666666666667 0.189852353768091 0.036586214559874 1.49874451138587 2.75881280185281 A0A096LNH6 NotFound A0A096LNH6.S1702.p_NotFound A0A096LNH6_S1702s _1_1_1702_1702 A0A096LNH6 A0A096LNH6|Q14185 Dedicator of cytokinesis protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12035.12035.3 10.85 10.85 99 1 1 1 0 734.3955 2121.2006 S1702s Hydrogen 1702 (R) sQDKLDKDDLEK (E) S(1.0)QDKLDKDDLEK K:TMT10-Lys-Only,s:Phosphorylated S DOCK1 218718.6 1 1 4503.1 30.63 HUMAN 1 7.2158 14.3668 PKKPLEQSC______-p Q9Y4E8-4;S234-p PKKPLEQSC______ 0.463382860142128 0.076763783434572 0.192666666666667 -0.411333333333333 6.1630190337565 14.7919969323688 0.192666666666667 -0.411333333333333 0.241934663335162 0.0331741884019734 1.3135525328836 -2.83770998993657 Q9Y4E8 USP15 Q9Y4E8.4.S234.p_USP15 Q9Y4E8-4_S234s _1_1_234_234 Q9Y4E8-4 Q9Y4E8-4 Isoform 4 of Ubiquitin carboxyl-terminal hydrolase 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10334.10538.3 9.93 6.1 1.189 3 1 1 0 732.7284 2116.2039 S234s TMT10 223 (R) GPSTPKKPLEQsC (-) GPS(0.0)T(0.0)PKKPLEQS(0.99)C K:TMT10,C:Carbamidomethylation,s:Phosphorylated S USP15 27264.4 1 14 1214.3 165.83 HUMAN 1 6.163 -14.792 PKKPQRHSLPATGVL-p Q6ZV73;S503-p PKKPQRHSLPATGVL 0.0495429320354942 0.00263377140296369 -0.682666666666667 -0.739666666666667 28.8946664495239 39.2548051704356 -0.682666666666667 -0.739666666666667 0.00128983261689688 0.000118718795848397 -6.10274656847654 -9.80118081971124 Q6ZV73 FGD6 Q6ZV73.S503.p_FGD6 Q6ZV73_S503s _1_1_503_503 Q6ZV73 Q6ZV73|Q6ZV73-2 FYVE, RhoGEF and PH domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10647.10647.4 11.06 11.06 1.906 2 1 1 0 575.596 2219.3955 S503s TMT10 498 (K) KPQRHsLPATGVLK (K) KPQRHS(0.99)LPAT(0.0)GVLK K:TMT10,s:Phosphorylated S FGD6 162696.3 1 6 630.1 257.05 HUMAN 1 -28.8947 -39.2548 PKKSKYMTPMQQKLN-p Q86U86;T656-p PKKSKYMTPMQQKLN 0.438965780358395 0.0207694246767137 0.151333333333333 -0.333 6.5847384965458 23.0150973790059 0.151333333333333 -0.333 0.219546314145047 0.00499447981287878 1.3881095867046 -4.55289380595391 Q86U86 PBRM1 Q86U86.T656.p_PBRM1 Q86U86_T656t _1_1_656_656 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-9|Q86U86-3|Q86U86-7|Q86U86-4|Q86U86-5|Q86U86-6 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13611.13611.2 10.72 10.72 7.469 2 1 1 0 782.8856 1484.8006 T656t TMT10 654 (K) YMtPMQQK (L) Y(0.0)MT(0.99)PMQQK K:TMT10,t:Phosphorylated T PBRM1 194199.5 2 13 194.1 462.54 HUMAN 1 6.5847 -23.0151 PKKTLTRSMTSLAQK-p F5H269;S1285-p PKKTLTRSMTSLAQK 0.572891517927251 0.0659318525192657 -0.092 -0.415 4.45170458215225 15.7116836539206 -0.092 -0.415 0.358781087386148 0.0268430360479411 -1.00254706875505 -3.0109440455894 F5H269 DMXL1 F5H269.S1285.p_DMXL1 F5H269_S1285s _1_1_1285_1285 F5H269 F5H269|Q9Y485 DmX-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14461.14461.2 12.04 12.04 2.134 3 1 1 0 702.373 1323.7706 S1285s TMT10 1285 (R) sMTSLAQK (I) S(0.99)MT(0.0)S(0.0)LAQK K:TMT10,s:Phosphorylated S DMXL1 344060.7 3 6 523.1 283.18 HUMAN 1 -4.4517 -15.7117 PKLADILSPRLIRRG-p Q96PE2;S914-p PKLADILSPRLIRRG 0.0762959664530792 0.67217752385782 0.503666666666667 0.0876666666666667 23.9619781114273 2.35877947991898 0.503666666666667 0.0876666666666667 0.00401607846051702 0.580927655664212 4.78559116942176 0.586794976264574 Q96PE2 ARHGEF17 Q96PE2.S914.p_ARHGEF17 Q96PE2_S914s _1_1_914_914 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22755.22960.2 8.88 8.88 99 1 1 1 0 597.3284 1113.6829 S914s TMT10 909 (K) LADILsPR (L) LADILS(1.0)PR s:Phosphorylated S ARHGEF17 223779.6 2 30 30.1 908.19 HUMAN 1 23.962 2.3588 PKLARQASIELPSMA-p P33241-3;S380-p PKLARQASIELPSMA 0.421140316027267 0.823080791613289 0.183666666666667 -0.0356666666666666 6.91678056645662 1.18510087560445 0.183666666666667 -0.0356666666666666 0.203386415974627 0.761184458414021 1.44643808487664 -0.31965324504092 P33241 LSP1 P33241.3.S380.p_LSP1 P33241-3_S380s _1_1_380_380 P33241-3 P33241-3|P33241-2 Isoform 3 of Lymphocyte-specific protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24140.24140.3 10.95 10.95 6.564 4 1 1 0 691.0349 1991.1247 S380s TMT10 378 (R) QAsIELPSMAVASTK (S) QAS(0.99)IELPS(0.0)MAVAS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S LSP1 51129.6 1 1 6559.1 10.95 HUMAN 1 6.9168 -1.1851 PKLDPPPSPHANRKK-p E7EUN2;S733-p PKLDPPPSPHANRKK 0.959031654122774 0.0509080047928782 0.00866666666666666 0.313 0.352322044400756 17.2700635039204 0.00866666666666667 0.313 0.922078287290313 0.0187496709150182 0.102464202591884 3.31344172461084 E7EUN2 NotFound E7EUN2.S733.p_NotFound E7EUN2_S733s _1_1_733_733 E7EUN2 E7EUN2|Q9UPQ3|Q9UPQ3-2|F5GXM9|A0A087X1U1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7065.7065.3 13.39 13.39 99 1 1 1 0 503.9193 1429.7749 S733s TMT10 728 (K) LDPPPsPHANR (K) LDPPPS(1.0)PHANR s:Phosphorylated S AGAP1 117700.5 4 13 1235.1 163.67 HUMAN 1 0.3523 17.2701 PKLDPPPSPHSNRKK-p Q96P47-4;S574-p PKLDPPPSPHSNRKK 0.660585362937783 0.075360403652243 0.0596666666666667 0.268333333333333 3.37020852004528 14.9037594179263 0.0596666666666667 0.268333333333333 0.460234475576062 0.0323313663178232 0.794653038401056 2.8585699129515 Q96P47 AGAP3 Q96P47.4.S574.p_AGAP3 Q96P47-4_S574s _1_1_574_574 Q96P47-4 Q96P47-4|Q96P47-2 Isoform 4 of Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6515.6515.3 14.36 14.36 5.418 2 1 1 0 509.2503 1445.7698 S574s TMT10 569 (K) LDPPPsPHSNR (K) LDPPPS(0.99)PHS(0.0)NR s:Phosphorylated S AGAP3 98919.4 6 18 1235.3 163.67 HUMAN 1 3.3702 14.9038 PKLDRNHSFRHILPG-p Q5VWQ8;S101-p PKLDRNHSFRHILPG 0.621295713198345 0.0260724094809852 -0.09 -0.327333333333333 3.84241034292252 21.5378451784606 -0.09 -0.327333333333333 0.412818323416743 0.00701803423043041 -0.886883774458583 -4.21270421542459 Q5VWQ8 DAB2IP Q5VWQ8.S101.p_DAB2IP Q5VWQ8_S101s _1_1_101_101 Q5VWQ8 Q5VWQ8|Q5VWQ8-5 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.4835.4835.3 10.73 10.73 99 1 1 1 0 451.8924 1273.6963 S101s TMT10 96 (K) LDRNHsFR (H) LDRNHS(1.0)FR s:Phosphorylated S DAB2IP 132592.9 2 3 281.1 388.28 HUMAN 1 -3.8424 -21.5378 PKLESKPSNGDSSSI-p Q5HYJ3;S227-p PKLESKPSNGDSSSI 0.62773843923883 0.0946578979092063 -0.0803333333333333 0.266333333333333 3.75753446102857 13.5392846079513 -0.0803333333333334 0.266333333333333 0.420965547469564 0.044266128378449 -0.8704887706001 2.60721036383762 Q5HYJ3 FAM76B Q5HYJ3.S227.p_FAM76B Q5HYJ3_S227s_1_1_227_227 Q5HYJ3 Q5HYJ3 Protein FAM76B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27448.27448.4 16.59 15.35 1.131 9 1 1 0 1016.76 3983.0812 S227s N245n TMT10 222 (K) LESKPsNGDSSSINQSADSGGTDnFVLISQLK (E) LES(0.0)KPS(0.99)N(0.0)GDS(0.0)S(0.0)S(0.0)IN(0.0)QS(0.0)ADS(0.0)GGT(0.0)DN(0.99)FVLIS(0.0)QLK K:TMT10,s:Phosphorylated S,n:Deamidated FAM76B 39677.2 2 4 2297.1 89.3 HUMAN 1 -3.7575 13.5393 PKLGRRHSMENMELM-p P81274;S408-p PKLGRRHSMENMELM 0.616234882150541 0.0140107463579745 0.0666666666666667 -0.402333333333333 3.90157263481148 25.7177209101463 0.0669540944522183 -0.402333333333333 0.407232786999719 0.00268057466730097 0.898267776824051 -5.22111865970859 P81274 GPSM2 P81274.S408.p_GPSM2 P81274_S408s _1_1_408_408 P81274 P81274 G-protein-signaling modulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11129.11129.3 9.97 9.97 99 1 1 1 0 648.6482 1863.9644 S408s TMT10 406 (R) RHsMENMELMK (L) RHS(1.0)MENMELMK K:TMT10,s:Phosphorylated S GPSM2 77402.4 8 1 3014.1 63.23 HUMAN 1 3.9016 -25.7177 PKLKAGGSVESLRSS-p O94885;S507-p PKLKAGGSVESLRSS 0.805859559428402 0.480728634277908 -0.0506666666666667 0.076 1.80792435486934 4.24539274285245 -0.0506666666666667 0.0760000000000001 0.659489012786218 0.376236326781404 -0.465832465175316 0.963584883449583 O94885 SASH1 O94885.S507.p_SASH1 O94885_S507s _1_1_507_507 O94885 O94885 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8273.8273.2 11.14 3.63 1.202 2 1 1 0 592.7971 1104.6211 S507s TMT10 504 (K) AGGsVESLR (S) AGGS(0.99)VES(0.0)LR s:Phosphorylated S SASH1 137734.8 2 10 295.1 379.69 HUMAN 1 -1.8079 4.2454 PKLMSAISKTFCPAH-p P49327;S1877-p PKLMSAISKTFCPAH 0.621295713198345 0.814556476301067 0.116666666666667 0.0263333333333334 3.84273693121102 1.24656496168263 0.116666666666667 0.0263333333333334 0.41278728075648 0.750487570387004 0.886946714706735 0.334598079497389 P49327 FASN P49327.S1877.p_FASN P49327_S1877s _1_1_1877_1877 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18891.18891.2 10.12 1.79 3.403 2 1 1 0 644.3612 1207.7485 S1877s TMT10 1872 (K) LMSAIsK (T) LMS(0.0)AIS(0.99)K K:TMT10,s:Phosphorylated S FASN 276046.1 1 21 175.1 481.87 HUMAN 1 3.8427 1.2466 PKLNDNVSAYCLHIA-p Q9BPZ7;S228-p PKLNDNVSAYCLHIA 0.133326246106049 0.0239960192223361 0.531666666666667 0.301 18.0265709629879 22.0799471508769 0.531666666666667 0.301 0.0157522611691877 0.00619448613076494 3.46764472896594 4.3356288686608 Q9BPZ7 MAPKAP1 Q9BPZ7.S228.p_MAPKAP1 Q9BPZ7_S228s _1_1_228_228 Q9BPZ7 Q9BPZ7|Q9BPZ7-2|Q9BPZ7-3|Q9BPZ7-6|Q9BPZ7-4|Q9BPZ7-5|E9PGB8 Target of rapamycin complex 2 subunit MAPKAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26864.26864.4 17.73 17.73 1.139 4 1 1 0 1095.2576 4298.06 S228s TMT10 223 (K) LNDNVsAYCLHIAEDDGEVDTDFPPLDSNEPIHK (F) LNDNVS(0.99)AY(0.0)CLHIAEDDGEVDT(0.0)DFPPLDS(0.0)NEPIHK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAPKAP1 59578.2 1 4 1906.1 108.05 HUMAN 1 18.0266 22.0799 PKLQASRSFPHLSKP-p A1L170-2;S61-p PKLQASRSFPHLSKP 0.486322168826895 0.0116671882651607 -0.146333333333333 0.440333333333333 5.76826680264096 27.0353531625491 -0.146333333333333 0.440333333333333 0.26495573220916 0.00197908607802219 -1.24317007300731 5.57073423994672 A1L170 C1orf226 A1L170.2.S61.p_C1orf226 A1L170-2_S61s _1_1_61_61 A1L170-2 A1L170-2 Isoform 2 of Uncharacterized protein C1orf226 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15530.15530.3 14.62 10.98 10.556 2 1 1 0 451.9162 1273.7669 S61s TMT10 61 (R) sFPHLSK (P) S(0.99)FPHLS(0.0)K K:TMT10,s:Phosphorylated S C1orf226 33805.4 3 1 1114.1 175.67 HUMAN 1 -5.7683 27.0354 PKLSKSLSFEMQQDE-p Q9Y6Y0;S338-p PKLSKSLSFEMQQDE 0.294620527989204 0.00900801240513708 -0.15 -0.473333333333333 10.016500938568 28.9539488384962 -0.15 -0.473333333333333 0.0996207727380274 0.00127234566994196 -1.98457738218399 -6.1108225118494 Q9Y6Y0 IVNS1ABP Q9Y6Y0.S338.p_IVNS1ABP Q9Y6Y0_S338s _1_1_338_338 Q9Y6Y0 Q9Y6Y0 Influenza virus NS1A-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25909.25909.2 18.57 13.72 3.813 2 1 1 0 1118.0538 2155.1357 S338s TMT10 336 (K) SLsFEMQQDELIEK (P) S(0.0)LS(0.99)FEMQQDELIEK K:TMT10,s:Phosphorylated S IVNS1ABP 72983.3 23 4 2117.1 96.92 HUMAN 1 -10.0165 -28.9539 PKLSNSDSQDIQGRN-p O14545;S491-p PKLSNSDSQDIQGRN 0.180832850556162 0.870508354156803 0.453666666666667 -0.0603333333333333 14.6483355839367 0.849150310672934 0.453666666666667 -0.0603333333333333 0.0342899176092057 0.82240353597772 2.81275273696856 -0.235576476756654 O14545 TRAFD1 O14545.S491.p_TRAFD1 O14545_S491s _1_1_491_491 O14545 O14545 TRAF-type zinc finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7987.7987.2 13.53 13.53 1.173 3 1 1 0 814.878 1548.7815 S491s TMT10 486 (K) LSNSDsQDIQGR (N) LS(0.0)NS(0.0)DS(0.99)QDIQGR s:Phosphorylated S TRAFD1 66266.3 1 6 2541.1 79.18 HUMAN 1 14.6483 -0.8492 PKLSPVISPRNSPRL-p Q08499-6;S59-p PKLSPVISPRNSPRL 0.583840571093275 0.751016269065957 -0.0783333333333333 0.0373333333333334 4.30081894979399 1.71880979678269 -0.0783333333333334 0.0373333333333334 0.371465175245279 0.673161113785117 -0.974212150140233 0.445539815603714 Q08499 PDE4D Q08499.6.S59.p_PDE4D Q08499-6_S55sS59s_2_2_55_59 Q08499-6 Q08499-6|Q08499-12|Q08499-7 Isoform 5 of cAMP-specific 3',5'-cyclic phosphodiesterase 4D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18505.18505.3 8.7 8.7 3.793 4 2 2 0 662.359 1825.1311 S55s S59s TMT10 49 (K) SVSPKLsPVIsPR (N) S(0.0)VS(0.0)PKLS(0.99)PVIS(0.99)PR K:TMT10,s:Phosphorylated S PDE4D 84996.7 4 5 2699.1 73.54 HUMAN 1 -4.3008 1.7188 PKLTLDESYDLVVEN-p Q9Y6Y8;S636-p PKLTLDESYDLVVEN 0.210044301362565 0.0112981063285659 -0.345333333333333 -0.391333333333333 13.0784908493301 27.261045602166 -0.345333333333333 -0.391333333333333 0.0492210546564384 0.00187886440921175 -2.52522022125377 -5.63230783125813 Q9Y6Y8 SEC23IP Q9Y6Y8.S636.p_SEC23IP Q9Y6Y8_S636s _1_1_636_636 Q9Y6Y8 Q9Y6Y8|Q9Y6Y8-2 SEC23-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25485.25485.4 19.39 19.39 3.953 3 1 1 0 811.9203 3164.7004 S636s TMT10 624 (K) QMPEEPKLTLDEsYDLVVENK (E) Q(0.0)M(0.0)PEEPKLT(0.0)LDES(0.99)Y(0.0)DLVVEN(0.0)K K:TMT10,s:Phosphorylated S SEC23IP 111759.1 4 2 1985.1 104.07 HUMAN 1 -13.0785 -27.261 PKMKVLESPRKGAAN-p O75962;S2417-p PKMKVLESPRKGAAN 0.18352831696006 0.00815813217337322 -0.227666666666667 -0.591333333333333 14.4795598600724 29.7528215601921 -0.227666666666667 -0.591333333333334 0.0356487260140462 0.00105856576398926 -2.78140009081692 -6.34731816055264 O75962 TRIO O75962.S2417.p_TRIO O75962_S2417s _1_1_2417_2417 O75962 O75962|O75962-4|O75962-5 Triple functional domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9812.9812.2 7.1 7.1 99 1 1 1 0 683.8962 1286.8196 S2417s TMT10 2414 (K) VLEsPRK (G) VLES(1.0)PRK K:TMT10,s:Phosphorylated S TRIO 349974.9 2 18 450.1 308.79 HUMAN 1 -14.4796 -29.7528 PKMLEEKSPEKVKAM-p E9PGC8;S1838-p PKMLEEKSPEKVKAM 0.158414346785039 0.0285043969636639 -0.397666666666667 -0.348666666666667 16.0270009931704 20.9280429279496 -0.397666666666667 -0.348666666666667 0.0249631795637044 0.00807598878557675 -3.07337647352712 -4.07696701013472 E9PGC8 NotFound E9PGC8.S1838.p_NotFound E9PGC8_S1838s _1_1_1838_1838 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12328.12328.2 12.59 12.59 99 1 1 1 0 929.5038 1778.0337 S1838s TMT10 1833 (K) MLEEKsPEK (V) MLEEKS(1.0)PEK K:TMT10,s:Phosphorylated S MAP1A 332906.7 5 26 20.1 1016.98 HUMAN 1 -16.027 -20.928 PKMLRSQSQLDLCKD-p P78411;S464-p PKMLRSQSQLDLCKD 0.690001442222247 0.763553479953782 -0.0856666666666667 0.051 3.01986659234841 1.61915465456749 -0.0856666666666667 0.051 0.498899812552294 0.688786354168704 -0.724444546343989 0.422659977922311 P78411 IRX5 P78411.S464.p_IRX5 P78411_S464s _1_1_464_464 P78411 P78411|P78411-2|P78411-3|H0YML8 Iroquois-class homeodomain protein IRX-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14171.14171.2 13.18 13.18 2.832 2 1 1 0 808.9103 1536.8456 S464s TMT10 462 (R) SQsQLDLCK (D) S(0.0)QS(0.99)QLDLCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S IRX5 50702.2 4 7 1529.1 133.88 HUMAN 1 -3.0199 1.6192 PKMLRTCSLPDLSKL-p Q96PY6-3;S1080-p PKMLRTCSLPDLSKL 0.995320766595454 0.423321848251142 -0.00100000000000001 0.113333333333333 0.037934181248106 4.97010735853988 -0.001 0.113333333333333 0.991303368361443 0.31841188086442 -0.0114123955015696 1.09835638481259 Q96PY6 NEK1 Q96PY6.3.S1080.p_NEK1 Q96PY6-3_S1080s _1_1_1080_1080 Q96PY6-3 Q96PY6-3|Q96PY6-6|Q96PY6-2|Q96PY6-4 Isoform 3 of Serine/threonine-protein kinase Nek1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17310.17310.2 11.54 11.54 2.833 3 1 1 0 779.9003 1478.8289 S1080s TMT10 1078 (R) TCsLPDLSK (L) T(0.0)CS(0.99)LPDLS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NEK1 146666.9 5 8 1537.1 133.31 HUMAN 1 -0.0379 4.9701 PKNPEDKSPQLSLSP-p M0QXA7;S190-p PKNPEDKSPQLSLSP 0.158549601557547 0.0225218320710093 -0.424666666666667 -0.376333333333333 16.022147900304 22.5003688576958 -0.424666666666667 -0.376333333333333 0.0249910906582885 0.00562293566094659 -3.07244406705977 -4.43247322026453 M0QXA7 WIZ M0QXA7.S190.p_WIZ M0QXA7_S190sS201s_2_2_190_201 M0QXA7 O95785|M0QXA7|O95785-3|O95785-4|B9EGQ5 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19351.19351.5 13.87 13.87 1.262 7 2 2 0 923.9202 4455.6312 S190s S201s TMT10 172 (K) KTPLALAGSPTPKNPEDKsPQLSLSPRPAsPK (A) KT(0.0)PLALAGS(0.0)PT(0.0)PKNPEDKS(0.99)PQLS(0.0)LS(0.0)PRPAS(0.99)PK K:TMT10,s:Phosphorylated S WIZ 104190.1 10 20 195.1 461.51 HUMAN 1 -16.0221 -22.5004 PKNPEPDSDEHTPVE-p Q8N5F7;S157-p PKNPEPDSDEHTPVE 0.471067248334803 0.942309811585179 -0.104333333333333 -0.0083333333333333 6.03507246585118 0.369450120647426 -0.104333333333333 -0.00833333333333331 0.249168279498974 0.918448877975602 -1.29080906333309 -0.107248070657448 Q8N5F7 NKAP Q8N5F7.S157.p_NKAP Q8N5F7_S149sS157sT161t_3_3_149_161 Q8N5F7 Q8N5F7 NF-kappa-B-activating protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26512.26512.5 11.14 11.14 99 3 3 3 0 977.4753 4642.4334 S149s N152n S157s T161t TMT10 137 (R) IGELGAPEVWGLsPKnPEPDsDEHtPVEDEEPKK (S) IGELGAPEVWGLS(1.0)PKN(1.0)PEPDS(1.0)DEHT(1.0)PVEDEEPKK K:TMT10,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T NKAP 47251.6 2 6 2507.1 80.61 HUMAN 1 -6.0351 -0.3695 PKNRSLASPLQPCSS-p P10242-4;S720-p PKNRSLASPLQPCSS 0.1026727701464 0.0205003861535871 0.720666666666667 0.318333333333333 20.9126730484184 23.1127403064817 0.720666666666667 0.318333333333333 0.00810462071270476 0.00488344127275928 4.07761548565775 4.5759722620297 P10242 MYB P10242.4.S720.p_MYB P10242-4_S720s _1_1_720_720 P10242-4 P10242-4|P10242-7|P10242-8|F8W8G5|P10242-2|P10242-9|P10242-10|P10242-11 Isoform 4 of Transcriptional activator Myb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22078.22096.3 17.13 17.13 2.178 6 1 1 0 901.0966 2621.3104 S720s TMT10 717 (R) SLAsPLQPCSSTWEPASCGK (M) S(0.0)LAS(0.99)PLQPCS(0.0)S(0.0)T(0.0)WEPAS(0.0)CGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MYB 86101 1 2 3232.1 56.48 HUMAN 1 20.9127 23.1127 PKNSISRTPPRRSEP-p Q9BVA0;T395-p PKNSISRTPPRRSEP 0.939179838433754 0.0226699346331302 0.0116666666666667 -0.338 0.532798428576076 22.4551975264599 0.0116666666666667 -0.338 0.884545458684654 0.00568172549264138 0.152196944836938 -4.42200347623545 Q9BVA0 KATNB1 Q9BVA0.T395.p_KATNB1 Q9BVA0_T395t _1_1_395_395 Q9BVA0 Q9BVA0 Katanin p80 WD40 repeat-containing subunit B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3924.3924.3 8.84 4.4 2.17 3 1 1 0 446.2358 1256.7272 T395t TMT10 390 (K) NSISRtPPR (R) NS(0.0)IS(0.0)RT(0.99)PPR t:Phosphorylated T KATNB1 73302.2 5 1 3860.1 41.58 HUMAN 1 0.5328 -22.4552 PKNTVVVSPHPKTSG-p Q9NXL9;S762-p PKNTVVVSPHPKTSG 0.767491684982091 0.00230842523947764 0.0516666666666667 -0.743 2.20117807016532 40.6192018574722 0.0516666666666667 -0.743 0.602396157518102 8.67121219880603e-05 0.552907399780439 -10.4134101854153 Q9NXL9 MCM9 Q9NXL9.S762.p_MCM9 Q9NXL9_S762s _1_1_762_762 Q9NXL9 Q9NXL9|Q9NXL9-4 DNA helicase MCM9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9413.9413.2 15.09 10.05 5.009 2 1 1 0 808.4518 1535.931 S762s TMT10 757 (K) NTVVVsPHPK (T) NT(0.0)VVVS(0.99)PHPK K:TMT10,s:Phosphorylated S MCM9 128793.8 3 1 1757.1 117.14 HUMAN 1 2.2012 -40.6192 PKPAHRNSNPVIAEL-p Q8IZ21;S270-p PKPAHRNSNPVIAEL 0.706246157488211 0.210002490099544 -0.107333333333333 -0.156 2.84007794444262 8.91637302155906 -0.107333333333333 -0.156 0.519986664056108 0.128340195892955 -0.687738836613276 -1.79324806249985 Q8IZ21 PHACTR4 Q8IZ21.S270.p_PHACTR4 Q8IZ21_S270sS291s_2_2_270_291 Q8IZ21 Q8IZ21|Q8IZ21-3 Phosphatase and actin regulator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36820.36820.5 24.5 24.5 1.267 6 2 2 0 764.2162 3657.1194 S270s S291s TMT10 269 (R) NsNPVIAELSQAINSGTLLSKPsPPLPPK (R) NS(0.99)NPVIAELS(0.0)QAINS(0.0)GT(0.0)LLS(0.0)KPS(0.99)PPLPPK K:TMT10,s:Phosphorylated S PHACTR4 78438 3 20 350.1 351.04 HUMAN 1 -2.8401 -8.9164 PKPDGEDTSGEEDAD-p Q96L91;T1010-p PKPDGEDTSGEEDAD 0.836155682095094 0.488069413769716 -0.0456666666666667 -0.0706666666666667 1.5027693700071 4.16229112942118 -0.0456666666666667 -0.0706666666666666 0.707494491784511 0.383504873335803 -0.395636520797624 -0.947861966153062 Q96L91 EP400 Q96L91.T1010.p_EP400 Q96L91_T1010tS1011s_2_2_1010_1011 Q96L91 Q96L91|Q96L91-2|Q96L91-5|Q96L91-3|Q96L91-4 E1A-binding protein p400 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21743.21743.5 18.32 18.32 5.326 6 2 2 0 1049.0826 5081.4426 T1010t S1011s TMT10 989 (K) LYEGAFLPSSQWPRPKPDGEDtsGEEDADDCPGDRESRK (D) LY(0.0)EGAFLPS(0.0)S(0.0)QWPRPKPDGEDT(0.99)S(0.99)GEEDADDCPGDRES(0.0)RK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S EP400 344909.2 5 34 91.1 620.97 HUMAN 1 -1.5028 -4.1623 PKPFNRSSPDVKFVC-p O95453;S101-p PKPFNRSSPDVKFVC 0.30738224176677 0.0616676141265351 -0.202 0.245333333333333 9.57553496610194 16.108116286253 -0.202 0.245333333333333 0.110267239774939 0.0245012573168268 -1.90805110026711 3.08677795507034 O95453 PARN O95453.S101.p_PARN O95453_S101s _1_1_101_101 O95453 O95453|O95453-2 Poly(A)-specific ribonuclease PARN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10555.10555.3 8.25 4.17 1.467 2 1 1 0 562.299 1604.9161 S101s TMT10 96 (K) PFNRSsPDVK (F) PFNRS(0.0)S(0.99)PDVK K:TMT10,s:Phosphorylated S PARN 73963.1 2 1 320.1 365.2 HUMAN 1 -9.5755 16.1081 PKPGSNCSPAQSVLS-p P22314;S24-p PKPGSNCSPAQSVLS 0.285207992770294 0.0173345637588107 0.158333333333333 0.414333333333333 10.2840717320387 24.2984692637785 0.158333333333333 0.414333333333333 0.0936683406706665 0.00371666205357662 2.03110953229034 4.86241874216294 P22314 UBA1 P22314.S24.p_UBA1 P22314_S24s_1_1_24_24 P22314 P22314 Ubiquitin-like modifier-activating enzyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25247.25247.5 31.23 24.58 1.038 10 1 1 0 1094.7307 5388.6931 S24s N44n TMT10 12 (R) VSGPDPKPGSNCsPAQSVLSEVPSVPTNGMAKnGSEADIDEGLYSR (Q) VS(0.0)GPDPKPGS(0.0)N(0.0)CS(0.99)PAQS(0.0)VLS(0.0)EVPS(0.0)VPT(0.0)N(0.50)GMAKN(0.50)GS(0.0)EADIDEGLY(0.0)S(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated UBA1 118930.9 70 3 289.1 381.86 HUMAN 1 10.2841 24.2985 PKPKRRKSGDDKDKK-p Q8IX12;S832-p PKPKRRKSGDDKDKK 0.170325535786342 0.00230842523947764 0.578666666666667 0.779333333333333 15.3407132473649 40.6224149148496 0.578666666666667 0.779333333333333 0.0292367218000286 8.66479931544339e-05 2.94259985294361 10.4148923247147 Q8IX12 CCAR1 Q8IX12.S832.p_CCAR1 Q8IX12_S832s _1_1_832_832 Q8IX12 Q8IX12|Q8IX12-2 Cell division cycle and apoptosis regulator protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4159.4159.5 10.2 4.58 99 1 1 1 0 538.6855 2609.4301 S832s TMT10 832 (K) sGDDKDKKEDRDER (K) S(1.0)GDDKDKKEDRDER K:TMT10,s:Phosphorylated S CCAR1 133503.3 2 7 1111.1 176.02 HUMAN 1 15.3407 40.6224 PKPLGGGTPKEEPTM-p Q9NTI5;T1301-p PKPLGGGTPKEEPTM 0.353671173698446 0.158107900853582 0.134 -0.144 8.38754021149329 10.5364144156172 0.134 -0.144 0.144959265185157 0.0883809282227857 1.7023308828608 -2.07418789729952 Q9NTI5 PDS5B Q9NTI5.T1301.p_PDS5B Q9NTI5_T1301t_1_1_1301_1301 Q9NTI5 Q9NTI5|Q9NTI5-2|Q9NTI5-5 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9041.9041.5 7.74 7.74 1.657 2 1 1 0 598.7405 2893.7103 T1301t M1308m TMT10 1291 (R) GRPPKPLGGGtPKEEPTmK (T) GRPPKPLGGGT(0.99)PKEEPT(0.0)M(1.0)K K:TMT10,t:Phosphorylated T,m:Oxidized methionine PDS5B 165919.5 2 12 100.1 597.99 HUMAN 1 8.3875 -10.5364 PKPPPAASPGVRAGH-p B0QYS7;S208-p PKPPPAASPGVRAGH 0.159989844318927 0.0816154540949912 -0.256 -0.339 15.9304539097755 14.4275214986299 -0.253177981741856 -0.339 0.0255243451697222 0.0360784482552314 -3.05484806574515 -2.77003236175769 B0QYS7 NotFound B0QYS7.S208.p_NotFound B0QYS7_S195sS208s_2_2_195_208 B0QYS7 B0QYS7|B0QYS6|P19484 Transcription factor EB HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15852.15852.4 11.49 11.49 1.613 3 2 2 0 715.3676 2698.5193 S195s S208s TMT10 190 (K) FAAHIsPAQGSPKPPPAAsPGVR (A) FAAHIS(0.99)PAQGS(0.0)PKPPPAAS(0.99)PGVR K:TMT10,s:Phosphorylated S TFEB 62317.7 1 4 2189.1 94.02 HUMAN 1 -15.9305 -14.4275 PKPQTSPSPKRATKK-p Q01518;S310-p PKPQTSPSPKRATKK 0.175663850925654 0.359158534441274 -0.360666666666667 0.111 15.0183182151787 5.90089144184695 -0.360666666666667 0.111 0.0314896750078112 0.256986823215262 -2.88188747532064 1.26659138400629 Q01518 CAP1 Q01518.S310.p_CAP1 Q01518_S310s _1_1_310_310 Q01518 Q01518|Q01518-2 Adenylyl cyclase-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10767.10767.5 13.1 13.1 1.285 5 1 1 0 598.9465 2910.7335 S310s TMT10 295 (R) SGPKPFSAPKPQTSPsPKR (A) S(0.0)GPKPFS(0.0)APKPQT(0.0)S(0.0)PS(0.99)PKR K:TMT10,s:Phosphorylated S CAP1 52357 4 5 1493.1 137.01 HUMAN 1 -15.0183 5.9009 PKPSPIPSPVLGRKP-p Q8NDI1;S436-p PKPSPIPSPVLGRKP 0.237990270998614 0.263319909715508 -0.242333333333333 0.126 11.92387705612 7.63495668844178 -0.242333333333333 0.126 0.0642114229841468 0.172386928283934 -2.31883975011495 1.57128926480239 Q8NDI1 EHBP1 Q8NDI1.S436.p_EHBP1 Q8NDI1_S436s _1_1_436_436 Q8NDI1 Q8NDI1|Q8NDI1-2|Q8NDI1-3 EH domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20491.20491.3 16.02 16.02 2.677 5 1 1 0 796.11 2306.3484 S436s TMT10 424 (K) DLSTSPKPSPIPsPVLGR (K) DLS(0.0)T(0.0)S(0.0)PKPS(0.0)PIPS(0.99)PVLGR K:TMT10,s:Phosphorylated S EHBP1 140642.4 4 7 285.1 385.52 HUMAN 1 -11.9239 7.635 PKPSPKNSPKKGGAP-p P29536;S524-p PKPSPKNSPKKGGAP 0.219082158828358 0.779589511665322 0.363 0.0493333333333334 12.7004970542048 1.49716513525108 0.363 0.0493333333333334 0.0536970336082643 0.708408048075754 2.45723555419743 0.394281461558531 P29536 LMOD1 P29536.S524.p_LMOD1 P29536_S524s _1_1_524_524 P29536 P29536|P29536-2 Leiomodin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8127.8127.5 12.73 8.51 2.117 5 1 1 0 654.3824 3187.9176 S524s TMT10 507 (K) GSPKPSPQPSPKPSPKNsPK (K) GS(0.0)PKPS(0.0)PQPS(0.0)PKPS(0.0)PKNS(0.99)PK K:TMT10,s:Phosphorylated S LMOD1 67200.1 1 4 2749.1 71.87 HUMAN 1 12.7005 1.4972 PKPVINSTPGRTPLR-p Q99459;T438-p PKPVINSTPGRTPLR 0.0741090610494485 0.142442392446714 -0.514333333333333 0.162666666666667 24.2349214743131 11.1526285984115 -0.514333333333334 0.162666666666667 0.0037714456417891 0.0766897178860185 -4.8525793711893 2.18187094095611 Q99459 CDC5L Q99459.T438.p_CDC5L Q99459_S427sS437sT438t_3_3_427_438 Q99459 Q99459 Cell division cycle 5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13859.13859.5 8.19 8.19 1.267 6 3 3 0 630.7266 2909.714 S427s S437s T438t TMT10 427 (R) sGTTPKPVINstPGRTPLRDK (L) S(0.99)GT(0.0)T(0.0)PKPVINS(0.99)T(0.99)PGRT(0.0)PLRDK K:TMT10,s:Phosphorylated S,t:Phosphorylated T CDC5L 92477.2 2 19 751.1 232.35 HUMAN 1 -24.2349 11.1526 PKQAPFRSPTAPSVF-p A0A0C4DFX9;S236-p PKQAPFRSPTAPSVF 0.761400486091273 0.440200282045926 0.0493333333333333 0.114666666666667 2.27010140443722 4.74658023793232 0.0493333333333333 0.114666666666667 0.592911480389151 0.335229304638495 0.567820545070035 1.05720152677065 A0A0C4DFX9 NELFA A0A0C4DFX9.S236.p_NELFA A0A0C4DFX9_S236s _1_1_236_236 A0A0C4DFX9 A0A0C4DFX9|Q9H3P2 Negative elongation factor A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17320.17320.3 16.67 14.22 1.487 5 1 1 0 776.0589 2246.1879 S236s TMT10 231 (K) QAPFRsPTAPSVFSPTGNR (T) QAPFRS(0.99)PT(0.0)APS(0.0)VFS(0.0)PT(0.0)GNR s:Phosphorylated S NELFA 58726.5 4 3 1015.1 188.17 HUMAN 1 2.2701 4.7466 PKQEAGISEGQGTAG-p O43583;S81-p PKQEAGISEGQGTAG 0.899788025079806 0.309033912495557 0.0283333333333333 0.117333333333333 0.897789829662398 6.74115071643127 0.0283333333333333 0.117333333333333 0.813244279445947 0.21177999238688 0.24803984604279 1.41524590402376 O43583 DENR O43583.S81.p_DENR O43583_S81s _1_1_81_81 O43583 O43583|F8VVL1 Density-regulated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14914.14914.4 20.2 20.2 1.18 4 1 1 0 871.9396 3404.7636 S81s TMT10 68 (K) LTVENSPKQEAGIsEGQGTAGEEEEK (K) LT(0.0)VENS(0.0)PKQEAGIS(0.99)EGQGT(0.0)AGEEEEK K:TMT10,s:Phosphorylated S DENR 22491 2 4 1681.1 121.37 HUMAN 1 0.8978 6.7412 PKQGLNNSPPVKEFK-p P49815-4;S960-p PKQGLNNSPPVKEFK 0.689586040425026 0.0048975805709655 0.132333333333333 -0.636666666666667 3.02451643574604 33.7185639340721 0.132333333333333 -0.636666666666667 0.498365943329804 0.000424759994585381 0.725387478505308 -7.63417569259164 P49815 TSC2 P49815.4.S960.p_TSC2 P49815-4_S960s _1_1_960_960 P49815-4 P49815|P49815-4 Isoform 4 of Tuberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10808.10808.2 11.41 7.92 99 1 1 1 0 796.4338 1511.8946 S960s TMT10 955 (K) QGLNNsPPVK (E) QGLNNS(1.0)PPVK K:TMT10,s:Phosphorylated S TSC2 200147.7 5 6 214.1 435.34 HUMAN 1 3.0245 -33.7186 PKQIKRESPPIRAFE-p O75376-2;S1338-p PKQIKRESPPIRAFE 0.759357936811367 0.147945719126077 -0.0453333333333333 0.380666666666667 2.29089284249848 10.9266635874576 -0.0453333333333334 0.380666666666667 0.590079756400621 0.0807855416643746 -0.572300340928715 2.14230788440526 O75376 NCOR1 O75376.2.S1338.p_NCOR1 O75376-2_S1338s _1_1_1338_1338 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18489.18489.4 13.27 13.27 13.273 2 1 1 0 553.3095 2130.2435 S1338s TMT10 1336 (K) REsPPIRAFEGAITK (G) RES(0.99)PPIRAFEGAIT(0.0)K K:TMT10,s:Phosphorylated S NCOR1 259453.1 7 12 35.1 889.74 HUMAN 1 -2.2909 10.9267 PKRGGRKSGNLPSKR-p P46013;S621-p PKRGGRKSGNLPSKR 0.541386275750762 0.00164640726975777 0.196333333333333 -1.05266666666667 4.91521660323189 44.3348456005409 0.196333333333333 -1.05266666666667 0.322461848830576 3.68566144805483e-05 1.08849795324965 -12.2641468687704 P46013 MKI67 P46013.S621.p_MKI67 P46013_S621s _1_1_621_621 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9131.9131.3 9.02 6.12 7.746 2 1 1 0 414.228 1160.7039 S621s TMT10 621 (K) sGNLPSK (R) S(0.99)GNLPS(0.0)K K:TMT10,s:Phosphorylated S MKI67 360912.4 2 14 5.1 1918.46 HUMAN 1 4.9152 -44.3348 PKRHNSASVENVSLR-p Q9Y4H2;S1176-p PKRHNSASVENVSLR 0.0261841200551002 0.00174309182338932 1.69233333333333 1.716 36.7271732040175 43.6489846601094 1.69233333333333 1.716 0.000212462691858544 4.3161997374699e-05 8.77044499024044 11.9009844099662 Q9Y4H2 IRS2 Q9Y4H2.S1176.p_IRS2 Q9Y4H2_S1176s _1_1_1176_1176 Q9Y4H2 Q9Y4H2 Insulin receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6104.6104.4 11.82 11.82 1.401 3 1 1 0 534.5427 2055.1823 S1176s TMT10 1171 (K) RHNSAsVENVSLRK (S) RHNS(0.0)AS(0.99)VENVS(0.0)LRK K:TMT10,s:Phosphorylated S IRS2 138529.8 3 10 1344.1 151.43 HUMAN 1 36.7272 43.649 PKRHSLSSTKLLSPQ-p P42858;S1865-p PKRHSLSSTKLLSPQ 0.202050344662992 0.923877027414493 -0.192 0.021 13.4859488896933 0.485865103222557 -0.192 0.021 0.0448131127162504 0.894156400580609 -2.59901213366708 0.139412431520998 P42858 HTT P42858.S1865.p_HTT P42858_S1865s _1_1_1865_1865 P42858 P42858 Huntingtin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.4039.4039.3 7 7 6.998 4 1 1 0 485.2684 1373.8265 S1865s TMT10 1860 (K) RHSLSsTK (L) RHS(0.0)LS(0.0)S(0.99)T(0.0)K K:TMT10,s:Phosphorylated S HTT 351590.8 1 10 343.1 353.16 HUMAN 1 -13.4859 0.4859 PKRKAFSSPQEEEEA-p Q14241;S542-p PKRKAFSSPQEEEEA 0.88993988323986 0.863059778441893 -0.0243333333333333 0.0203333333333333 0.989099935515077 0.901638219022968 -0.0243333333333333 0.0203333333333333 0.796324369556838 0.812523963041013 -0.27114202175977 0.248995890175404 Q14241 TCEB3 Q14241.S542.p_TCEB3 Q14241_S542s _1_1_542_542 Q14241 Q14241|A0A024RAC6 Elongin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15731.15731.2 17.37 13.77 1.431 3 1 1 0 1025.9507 1970.9293 S542s TMT10 539 (K) AFSsPQEEEEAGFTGR (R) AFS(0.0)S(0.99)PQEEEEAGFT(0.0)GR s:Phosphorylated S ELOA 90363.7 3 8 2069.1 99.52 HUMAN 1 -0.9891 0.9016 PKRLGAHTP______-p O00213;T709-p PKRLGAHTP______ 0.175126391202982 0.108991451740963 -0.214666666666667 -0.358333333333333 15.0623177650399 12.7182945499751 -0.214666666666667 -0.358333333333333 0.0311722552320443 0.0534774321039558 -2.89014711376044 -2.4591124525006 O00213 APBB1 O00213.T709.p_APBB1 O00213_T709t _1_1_709_709 O00213 O00213|J3KPL8|O00213-2|O00213-5|O00213-3|O00213-6|A0A087WYH9|O00213-4|A0A087X0V7|V9GYR7 Amyloid-beta A4 precursor protein-binding family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4315.4315.2 8.82 8.82 99 1 1 1 0 530.7789 980.5839 T709t TMT10 704 (K) RLGAHtP (-) RLGAHT(1.0)P t:Phosphorylated T APBB1 77984.5 2 1 6892.1 8.82 HUMAN 1 -15.0623 -12.7183 PKRRASPSPPPKRRV-p A9Z1X7;S637-p PKRRASPSPPPKRRV 0.281285200254826 0.825401001968374 0.230333333333333 0.0216666666666667 10.4171446085596 1.16701654407695 0.230333333333333 0.0216666666666667 0.0908417598623219 0.764360693154116 2.05428519107014 0.315231765978838 A9Z1X7 NotFound A9Z1X7.S637.p_NotFound A9Z1X7_S635sS637s_2_2_635_637 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4508.4508.2 8.34 8.34 99 2 2 2 0 663.3146 1165.6891 S635s S637s Hydrogen 634 (R) AsPsPPPKR (R) AS(1.0)PS(1.0)PPPKR K:TMT10-Lys-Only,s:Phosphorylated S SRRM1 103445.7 44 66 8.1 1346.57 HUMAN 1 10.4171 1.167 PKRRRCMSPLLRGRQ-p Q9UL03;S661-p PKRRRCMSPLLRGRQ 0.800189174673997 0.162804379552109 0.0396666666666667 -0.227 1.86517130612682 10.3655377896626 0.0396666666666667 -0.227 0.650852937639506 0.0919276633136219 0.478731810842486 -2.04443358266453 Q9UL03 INTS6 Q9UL03.S661.p_INTS6 Q9UL03_S661s _1_1_661_661 Q9UL03 Q9UL03|Q9UL03-3|B3KQH5|G5E9X1 Integrator complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17190.17190.2 9.37 9.37 99 1 1 1 0 593.2896 1105.6059 S661s TMT10 659 (R) CMsPLLR (G) CMS(1.0)PLLR C:Carbamidomethylation,s:Phosphorylated S INTS6 101015.9 2 2 4166.1 36.38 HUMAN 1 1.8652 -10.3655 PKRRREHSPDSDAYN-p Q5T200;S845-p PKRRREHSPDSDAYN 0.623010933774293 0.243115529183382 -0.0916666666666667 -0.142 3.81871741871123 8.0906932687248 -0.0916666666666667 -0.142 0.415076607140375 0.155213922060937 -0.882314722417661 -1.65036053946799 Q5T200 ZC3H13 Q5T200.S845.p_ZC3H13 Q5T200_S845s _1_1_845_845 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6217.6217.4 20.28 20.28 2.52 4 1 1 0 694.5729 2695.305 S845s TMT10 843 (R) EHsPDSDAYNSGDDKNEK (H) EHS(0.99)PDS(0.0)DAY(0.0)NS(0.0)GDDKNEK K:TMT10,s:Phosphorylated S ZC3H13 197316.7 1 15 24.1 987.82 HUMAN 1 -3.8187 -8.0907 PKRRTRKSINYSKID-p A0A0B4J1V9;S561-p PKRRTRKSINYSKID 0.338375842979488 0.00117984223282173 0.163333333333333 -1.81 8.75453522124066 48.4710897664638 0.163333333333333 -1.81 0.133212959821444 1.4219719297775e-05 1.76587264803715 -14.6863293146626 A0A0B4J1V9 HELLS A0A0B4J1V9.S561.p_HELLS A0A0B4J1V9_S561s _1_1_561_561 A0A0B4J1V9 A0A0B4J1V9|Q9NRZ9|Q9NRZ9-2|Q9NRZ9-3|Q9NRZ9-4|Q9NRZ9-5|F6XU50|Q9NRZ9-6|A0A087WSW7 Helicase, lymphoid-specific, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24538.24538.3 17.29 13.2 3.304 3 1 1 0 893.8022 2599.4222 S561s TMT10 561 (K) sINYSKIDDFPNELEK (L) S(0.99)INY(0.0)S(0.0)KIDDFPNELEK K:TMT10,s:Phosphorylated S HELLS 103341.1 2 3 2348.1 87.11 HUMAN 1 8.7545 -48.4711 PKRRVSHSPPPKQRS-p A9Z1X7;S647-p PKRRVSHSPPPKQRS 0.17938997885243 0.0750180027556397 0.215666666666667 0.236 14.7339335480978 14.9290166600472 0.215666666666667 0.236 0.0336206917756053 0.0321438826572919 2.82869754572553 2.86329117986018 A9Z1X7 NotFound A9Z1X7.S647.p_NotFound A9Z1X7_S647s _1_1_647_647 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5163.5587.3 12.38 10.19 2.376 2 1 1 0 462.9231 1306.7883 S647s TMT10 644 (R) VSHsPPPK (Q) VS(0.0)HS(0.99)PPPK K:TMT10,s:Phosphorylated S SRRM1 103445.7 11 32 8.1 1346.57 HUMAN 1 14.7339 14.929 PKRSVSLSMRKSGAM-p O60238;S168-p PKRSVSLSMRKSGAM 0.543728416179957 0.0152415612815696 0.144333333333333 0.558333333333333 4.88555983684455 25.1362599178011 0.144333333333333 0.558333333333333 0.32467138699161 0.00306460148873691 1.08304402049634 5.07199470386441 O60238 BNIP3L O60238.S168.p_BNIP3L O60238_S168s _1_1_168_168 O60238 O60238|O60238-2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8961.8961.2 9.12 9.12 1.652 3 1 1 0 608.8202 1136.6659 S168s Hydrogen 164 (R) SVSLsMRK (S) S(0.0)VS(0.0)LS(0.99)MRK K:TMT10-Lys-Only,s:Phosphorylated S BNIP3L 24044.1 1 6 2458.1 82.41 HUMAN 1 4.8856 25.1363 PKRTQRLSAETWDLL-p A0A0A0MRC4;S445-p PKRTQRLSAETWDLL 0.0619559470709041 0.0118129980237372 -0.421333333333333 -0.574333333333333 26.3014303202579 26.9411127874906 -0.421333333333333 -0.574333333333333 0.00234345688612899 0.00202250088932767 -5.38112194144984 -5.54517285157128 A0A0A0MRC4 NotFound A0A0A0MRC4.S445.p_NotFound A0A0A0MRC4_S445s _1_1_445_445 A0A0A0MRC4 A0A0A0MRC4|Q86YR5|A0A0A0MSK4|Q86YR5-4 G-protein-signaling modulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22852.22852.3 11.98 5.63 1.695 3 1 1 0 633.3301 1818.0071 S445s TMT10 441 (R) TQRLsAETWDLLR (L) T(0.0)QRLS(0.99)AET(0.0)WDLLR s:Phosphorylated S GPSM1 78910.1 3 2 1684.1 121.22 HUMAN 1 -26.3014 -26.9411 PKRVPDPSPVTKGTA-p A0A0J9YWL0;S549-p PKRVPDPSPVTKGTA 0.795361317938502 0.525427228898308 0.0423333333333333 0.103333333333333 1.92155167245809 3.75409024820288 0.0423333333333333 0.103333333333333 0.642458135145731 0.42129953053326 0.491358146732139 0.869681095785022 A0A0J9YWL0 NotFound A0A0J9YWL0.S549.p_NotFound A0A0J9YWL0_S549s _1_1_549_549 A0A0J9YWL0 A0A0J9YWL0|Q9Y4K1 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9988.9988.4 13.6 7.99 2.301 4 1 1 0 691.6069 2683.4415 S549s TMT10 544 (K) RVPDPsPVTKGTAAESGEEAAR (A) RVPDPS(0.99)PVT(0.0)KGT(0.0)AAES(0.0)GEEAAR K:TMT10,s:Phosphorylated S CRYBG1 233643.7 5 18 79.1 640.71 HUMAN 1 1.9216 3.7541 PKSGRNFSGPRNERR-p Q9Y520-7;S1570-p PKSGRNFSGPRNERR 0.0628764257048439 0.00727515846341251 -0.435333333333333 -0.519 26.1013485528066 30.5859691333895 -0.435333333333333 -0.519 0.00245394680821234 0.000873781985326418 -5.32823236416444 -6.60167203355653 Q9Y520 PRRC2C Q9Y520.7.S1570.p_PRRC2C Q9Y520-7_S1570s _1_1_1570_1570 Q9Y520-7 Q9Y520-7|Q9Y520-5|E7EPN9 Isoform 7 of Protein PRRC2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4729.4729.3 7.23 7.23 99 1 1 1 0 462.5555 1305.6861 S1570s TMT10 1568 (R) NFsGPRNER (R) NFS(1.0)GPRNER s:Phosphorylated S PRRC2C 317703.2 1 106 36.3 882.05 HUMAN 1 -26.1013 -30.586 PKSGTLKSPPKGFDT-p Q14155-5;S164-p PKSGTLKSPPKGFDT 0.731724827574726 0.00479198585191769 0.052 -0.635333333333333 2.57337797711246 33.9037716554774 0.052 -0.635333333333333 0.552919876429111 0.000407026639633943 0.632343713947914 -7.69924240734949 Q14155 ARHGEF7 Q14155.5.S164.p_ARHGEF7 Q14155-5_S164s _1_1_164_164 Q14155-5 Q14155|Q14155-3|Q14155-2|Q14155-5|B1ALK7|Q14155-1|Q14155-6|E7EU80 Isoform 5 of Rho guanine nucleotide exchange factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9662.9662.3 8.05 4.01 1.363 3 1 1 0 561.3344 1602.0194 S164s TMT10 159 (K) SGTLKsPPK (G) S(0.0)GT(0.0)LKS(0.99)PPK K:TMT10,s:Phosphorylated S ARHGEF7 83311.3 6 2 434.1 313.68 HUMAN 1 2.5734 -33.9038 PKSLGSASPGPGQPP-p Q9C0B5;S684-p PKSLGSASPGPGQPP 0.258855999857316 0.597637093722794 0.203333333333333 0.0586666666666667 11.1556918890091 3.02730667543183 0.203333333333333 0.0586666666666667 0.0766356439638951 0.4980458577921 2.18340795809709 0.725850745639763 Q9C0B5 ZDHHC5 Q9C0B5.S684.p_ZDHHC5 Q9C0B5_S684s _1_1_684_684 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13998.13998.2 17.08 15.4 3.097 6 1 1 0 1051.5292 2022.0817 S684s TMT10 679 (K) SLGSAsPGPGQPPLSSPTR (G) S(0.0)LGS(0.0)AS(0.99)PGPGQPPLS(0.0)S(0.0)PT(0.0)R s:Phosphorylated S ZDHHC5 78285 4 22 134.1 530.74 HUMAN 1 11.1557 3.0273 PKSMTSLSPRSSLSS-p Q8IX03-2;S535-p PKSMTSLSPRSSLSS 0.67705106710214 0.0860101260452251 0.0556666666666667 0.229 3.17107064510718 14.1027631484711 0.0556666666666667 0.229 0.481829000017676 0.0388797698240974 0.754949564090444 2.71016529170351 Q8IX03 WWC1 Q8IX03.2.S535.p_WWC1 Q8IX03-2_S535s _1_1_535_535 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9893.9893.2 11.33 3.85 2.642 4 1 1 0 594.2887 1107.603 S535s TMT10 530 (K) SMTSLsPR (S) S(0.0)MT(0.0)S(0.0)LS(0.99)PR s:Phosphorylated S WWC1 126701.1 2 10 312.1 370.85 HUMAN 1 3.1711 14.1028 PKSNQYPSPKRCFSS-p Q9UBS9-2;S1206-p PKSNQYPSPKRCFSS 0.662164733874488 0.00117984223282173 -0.0703333333333333 -1.19466666666667 3.35420310547526 48.4612913672889 -0.0703333333333333 -1.19466666666667 0.461933745148376 1.42518375461495e-05 -0.791480851991143 -14.680086938311 Q9UBS9 SUCO Q9UBS9.2.S1206.p_SUCO Q9UBS9-2_S1206s _1_1_1206_1206 Q9UBS9-2 Q9UBS9-2|B4DYM4|A0A087WV04 Isoform 2 of SUN domain-containing ossification factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5210.5210.3 10.52 10.52 7.327 3 1 1 0 538.9521 1534.8742 S1206s TMT10 1201 (K) SNQYPsPKR (C) S(0.0)NQY(0.0)PS(0.99)PKR K:TMT10,s:Phosphorylated S SUCO 157841.3 4 1 1071.1 180.72 HUMAN 1 -3.3542 -48.4613 PKSPAHLSLIREAAN-p O76094;S448-p PKSPAHLSLIREAAN 0.666639852843335 0.457216836162887 0.305333333333333 0.095 3.29185455876856 4.53089766922878 0.305333333333333 0.095 0.468613228472282 0.352298044927207 0.779092702001101 1.01715559973657 O76094 SRP72 O76094.S448.p_SRP72 O76094_S448s _1_1_448_448 O76094 O76094|O76094-2 Signal recognition particle subunit SRP72 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14731.14731.3 11.6 11.6 11.601 2 1 1 0 434.9092 1222.7469 S448s TMT10 443 (K) SPAHLsLIR (E) S(0.0)PAHLS(0.99)LIR s:Phosphorylated S SRP72 75175.4 1 2 1363.1 149.83 HUMAN 1 3.2919 4.5309 PKSPTPKSPPSRKKD-p Q9NVD7;S19-p PKSPTPKSPPSRKKD 0.826776350969775 0.0430048874631655 0.0316666666666667 0.334 1.59243203686282 18.3102722190991 0.0316666666666667 0.334 0.693037598226642 0.0147561403776187 0.416524093153807 3.52238625422758 Q9NVD7 PARVA Q9NVD7.S19.p_PARVA Q9NVD7_S19s _1_1_19_19 Q9NVD7 J3KNQ4|Q9NVD7|Q9NVD7-2 Alpha-parvin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5547.5547.2 10.14 6.26 2 4 1 1 0 796.4349 1511.8946 S19s TMT10 14 (K) SPTPKsPPSR (K) S(0.0)PT(0.0)PKS(0.99)PPS(0.0)R K:TMT10,s:Phosphorylated S PARVA 42300 10 2 2338.1 87.3 HUMAN 1 1.5924 18.3103 PKSQDQDSEVNELSR-p E7ERS3;S83-p PKSQDQDSEVNELSR 0.255592041642643 0.0293660896783938 -0.324666666666667 0.620333333333333 11.2628726321418 20.7385170331859 -0.324666666666667 0.620333333333333 0.074767478892634 0.00843622776852773 -2.20222799209058 4.03531207678877 E7ERS3 ZC3H18 E7ERS3.S83.p_ZC3H18 E7ERS3_S83s _1_1_83_83 E7ERS3 E7ERS3|Q86VM9|Q86VM9-2 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8862.8862.2 17.92 17.92 5.033 3 1 1 0 908.4021 1735.8296 S83s TMT10 78 (K) SQDQDsEVNELSR (G) S(0.0)QDQDS(0.99)EVNELS(0.0)R s:Phosphorylated S ZC3H18 109165.8 1 4 157.1 499.97 HUMAN 1 -11.2629 20.7385 PKSRTAYSGGAEDLE-p Q9Y388;S232-p PKSRTAYSGGAEDLE 0.23797684518109 0.105883993602698 0.261333333333333 -0.368 11.9300355275468 12.883881823868 0.261333333333333 -0.368 0.0641204331178881 0.0514768327132512 2.31993096928692 -2.48881299974314 Q9Y388 RBMX2 Q9Y388.S232.p_RBMX2 Q9Y388_S232s _1_1_232_232 Q9Y388 Q9Y388|A0A1W2PP04 RNA-binding motif protein, X-linked 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18552.18552.4 11.91 11.91 2.217 3 1 1 0 634.3441 2454.3807 S232s TMT10 229 (R) TAYsGGAEDLERELKK (E) T(0.0)AY(0.0)S(0.99)GGAEDLERELKK K:TMT10,s:Phosphorylated S RBMX2 37563.2 2 3 1440.1 142.33 HUMAN 1 11.93 -12.8839 PKSSREGSGGPQESS-p O96013;S167-p PKSSREGSGGPQESS 0.163265534069753 0.961050637830868 -0.382333333333333 -0.00633333333333332 15.7715455402845 0.248267300338203 -0.382333333333333 -0.00633333333333331 0.0264755777448415 0.944437602305722 -3.02444650631051 -0.0729814103123255 O96013 PAK4 O96013.S167.p_PAK4 O96013_S167s _1_1_167_167 O96013 O96013 Serine/threonine-protein kinase PAK 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3553.3553.3 12.78 12.78 10.906 3 1 1 0 548.2488 1562.7608 S167s Hydrogen 165 (R) EGsGGPQESSRDK (R) EGS(0.99)GGPQES(0.0)S(0.0)RDK K:TMT10-Lys-Only,s:Phosphorylated S PAK4 64356.2 3 4 573.1 269.06 HUMAN 1 -15.7715 -0.2483 PKTIVRGSKGAKDGA-p O96013;S74-p PKTIVRGSKGAKDGA 0.0217780195589434 0.00232985334139993 -0.977 -0.828333333333333 38.5674839115349 40.4876820066968 -0.977 -0.828333333333333 0.000139075813466535 8.93782401795247e-05 -9.5263225423423 -10.3529077251332 O96013 PAK4 O96013.S74.p_PAK4 O96013_S74s _1_1_74_74 O96013 O96013|O96013-4|O96013-2 Serine/threonine-protein kinase PAK 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7194.7194.3 7.66 3.07 7.664 2 1 1 0 433.5916 1218.7934 S74s TMT10 69 (K) TIVRGsK (G) T(0.0)IVRGS(0.99)K K:TMT10,s:Phosphorylated S PAK4 64356.2 1 1 573.1 269.06 HUMAN 1 -38.5675 -40.4877 PKTKEYASEGEPLFA-p Q9UQR0;S522-p PKTKEYASEGEPLFA 0.0622506947834567 0.126246717356981 0.443 -0.169 26.2667883871367 11.8513992137106 0.443 -0.169 0.00236222445523086 0.0652920160376243 5.37193740481649 -2.3048710727422 Q9UQR0 SCML2 Q9UQR0.S522.p_SCML2 Q9UQR0_S522s _1_1_522_522 Q9UQR0 Q9UQR0 Sex comb on midleg-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22893.22893.3 12.59 12.59 4.636 5 1 1 0 1207.9332 3541.8153 S522s TMT10 519 (K) EYAsEGEPLFAGGSAIPKEENLSEDSK (S) EY(0.0)AS(0.99)EGEPLFAGGS(0.0)AIPKEENLS(0.0)EDS(0.0)K K:TMT10,s:Phosphorylated S SCML2 78111.2 2 4 1086.1 179.58 HUMAN 1 26.2668 -11.8514 PKTKSDESGEEKNGD-p Q6PKG0;S228-p PKTKSDESGEEKNGD 0.232902761459989 0.0928905854034992 0.429333333333333 -0.605666666666667 12.1648628965954 13.6509980297012 0.429333333333333 -0.605666666666667 0.0607454439427102 0.0431419923052583 2.36161122532553 -2.62753278062911 Q6PKG0 LARP1 Q6PKG0.S228.p_LARP1 Q6PKG0_S228s _1_1_228_228 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4296.4296.5 14.62 8.59 2.276 3 1 1 0 690.9381 3370.6951 S228s TMT10 223 (K) TKSDEsGEEKNGDEDCQRGGQK (K) T(0.0)KS(0.0)DES(0.99)GEEKNGDEDCQRGGQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S LARP1 123907.4 4 39 28.1 931.95 HUMAN 1 12.1649 -13.651 PKTPNRASPRPYYPQ-p Q14686;S1216-p PKTPNRASPRPYYPQ 0.367137725804172 0.0243079629759943 0.144 0.300666666666667 8.07780899878615 21.9959379629232 0.144 0.300666666666667 0.155675080913318 0.00631547766694961 1.64865576168775 4.31643707443458 Q14686 NCOA6 Q14686.S1216.p_NCOA6 Q14686_S1216s _1_1_1216_1216 Q14686 Q14686 Nuclear receptor coactivator 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12482.12482.4 10.69 6.91 2.289 10 1 1 0 1011.9999 3965.0103 S1216s TMT10 1211 (K) TPNRAsPRPYYPQTPNNRPPSTEPSEISLSPER (L) T(0.0)PNRAS(0.99)PRPY(0.0)Y(0.0)PQT(0.0)PNNRPPS(0.0)T(0.0)EPS(0.0)EIS(0.0)LS(0.0)PER s:Phosphorylated S NCOA6 219484.1 2 3 327.1 360.02 HUMAN 1 8.0778 21.9959 PKTQSPHSPKEESER-p Q5T5U3;S1098-p PKTQSPHSPKEESER 0.494434979398677 0.367905633477971 -0.108666666666667 0.112333333333333 5.63277329916721 5.75824955312261 -0.108666666666667 0.112333333333333 0.27335226076512 0.265567573044047 -1.21885753354081 1.24109129594148 Q5T5U3 ARHGAP21 Q5T5U3.S1098.p_ARHGAP21 Q5T5U3_S1098s _1_1_1098_1098 Q5T5U3 Q5T5U3|A0A1B0GV73|F8W9U9|Q5T5U3-3 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3732.3732.4 11.68 11.68 2.289 4 1 1 0 602.5706 2327.2922 S1098s TMT10 1093 (K) TQSPHsPKEESERK (L) T(0.0)QS(0.0)PHS(0.99)PKEES(0.0)ERK K:TMT10,s:Phosphorylated S ARHGAP21 218696.3 3 17 148.1 512.52 HUMAN 1 -5.6328 5.7582 PKTRHSPTPQQSNRT-p A9Z1X7;T411-p PKTRHSPTPQQSNRT 0.0163284757072266 0.0358943447129582 0.912 0.554 41.7958595498576 19.4497467534515 0.912 0.554 6.613236362368e-05 0.011350770025488 10.9962834879055 3.75844847547438 A9Z1X7 NotFound A9Z1X7.T411.p_NotFound A9Z1X7_S409sT411t_2_2_409_411 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3106.3106.4 7.81 7.81 2.164 4 2 2 0 450.2051 1637.8669 S409s T411t TMT10 406 (K) TRHsPtPQQSNR (T) T(0.0)RHS(0.99)PT(0.99)PQQS(0.0)NR s:Phosphorylated S,t:Phosphorylated T SRRM1 103445.7 17 56 8.1 1346.57 HUMAN 1 41.7959 19.4497 PKVNVPGSQAQLKEV-p Q02818;S224-p PKVNVPGSQAQLKEV 0.219082158828358 0.18652858667368 -0.182666666666667 0.150333333333333 12.7001187543559 9.59203166856582 -0.182666666666667 0.150333333333333 0.0537017111865665 0.109849183487421 -2.45716773070483 1.91017384624459 Q02818 NUCB1 Q02818.S224.p_NUCB1 Q02818_S224s _1_1_224_224 Q02818 Q02818 Nucleobindin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15417.15417.3 11.6 10.51 99 1 1 1 0 560.3145 1598.963 S224s TMT10 219 (K) VNVPGsQAQLK (E) VNVPGS(1.0)QAQLK K:TMT10,s:Phosphorylated S NUCB1 53878.3 3 1 4828.1 26.21 HUMAN 1 -12.7001 9.592 PKVPAKLSPMKQAQL-p P35658-3;S941-p PKVPAKLSPMKQAQL 0.301639765350884 0.0955876725450255 -0.218333333333333 -0.181 9.76243827282739 13.4848697196057 -0.218333333333333 -0.181 0.105622434344575 0.044824249624926 -1.94046585319648 -2.59732689085404 P35658 NUP214 P35658.3.S941.p_NUP214 P35658-3_S941s _1_1_941_941 P35658-3 P35658-5|P35658-3|P35658-4|P35658-2|A0A0A0MSW3 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19183.19183.3 13.25 13.25 6.208 2 1 1 0 798.1558 2312.4909 S941s TMT10 932 (K) SLPKVPAKLsPMK (Q) S(0.0)LPKVPAKLS(0.99)PMK K:TMT10,s:Phosphorylated S NUP214 214428.5 19 16 111.1 572.27 HUMAN 1 -9.7624 -13.4849 PKVPAPFSPPPSKPR-p Q9P206-3;S623-p PKVPAPFSPPPSKPR 0.741183072887383 0.915561788193964 -0.054 -0.0153333333333333 2.46897138871883 0.538544425117665 -0.054 -0.0153333333333333 0.566373416715375 0.883375921759909 -0.610324818955237 -0.153738665215102 Q9P206 KIAA1522 Q9P206.3.S623.p_KIAA1522 Q9P206-3_S623s _1_1_623_623 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16760.16760.3 13.99 13.99 9.104 2 1 1 0 639.0239 1835.0944 S623s TMT10 618 (K) VPAPFsPPPSKPR (S) VPAPFS(0.99)PPPS(0.0)KPR K:TMT10,s:Phosphorylated S KIAA1522 108782.6 4 27 62.1 704.36 HUMAN 1 -2.469 -0.5385 PKVSESPSPVTTNTP-p Q9ULH7-5;S222-p PKVSESPSPVTTNTP 0.0602896840144433 0.133959524553788 -0.440666666666667 -0.209333333333333 26.6908903695388 11.5071135249764 -0.440666666666667 -0.209333333333333 0.00214245132108583 0.0706787153977664 -5.48517343104564 -2.24413664472472 Q9ULH7 MKL2 Q9ULH7.5.S222.p_MKL2 Q9ULH7-5_S222s _1_1_222_222 Q9ULH7-5 Q9ULH7-5|Q9ULH7-4|Q9ULH7-3|Q9ULH7-2|I3L2S3 Isoform 5 of MKL/myocardin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31924.31924.3 20.2 18.13 1.156 9 1 1 0 1152.5968 3375.8088 S222s TMT10 217 (K) VSESPsPVTTNTPAQFASVSPTVPEFLK (T) VS(0.0)ES(0.0)PS(0.99)PVT(0.0)T(0.0)NT(0.0)PAQFAS(0.0)VS(0.0)PT(0.0)VPEFLK K:TMT10,s:Phosphorylated S MKL2 119334.1 9 4 464.1 303.55 HUMAN 1 -26.6909 -11.5071 PKVSPLLSEGELPVF-p Q96IQ9-2;S380-p PKVSPLLSEGELPVF 0.135751388927276 0.830562297692722 0.283333333333333 -0.0213333333333333 17.7881289109164 1.12766593257285 0.283333333333333 -0.0213333333333333 0.0166412945980257 0.771317893920392 3.41951293458918 -0.305571830703048 Q96IQ9 ZNF414 Q96IQ9.2.S380.p_ZNF414 Q96IQ9-2_S380s _1_1_380_380 Q96IQ9-2 Q96IQ9-2 Isoform 2 of Zinc finger protein 414 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.37535.37535.2 17.64 17.64 4.482 3 1 1 0 1012.5313 1944.0891 S380s TMT10 375 (K) VSPLLsEGELPVFSQL (-) VS(0.0)PLLS(0.99)EGELPVFS(0.0)QL s:Phosphorylated S ZNF414 41678.4 2 4 2703.1 73.44 HUMAN 1 17.7881 -1.1277 PKYAEISSDEDNDSD-p Q6KC79;S1090-p PKYAEISSDEDNDSD 0.557101429711056 0.00474018699637445 -0.182666666666667 0.682833333333333 4.69077311022749 33.9890579723045 -0.182666666666667 0.682833333333333 0.339564819507638 0.000399111464198696 -1.04707324018687 7.72936416522388 Q6KC79 NIPBL Q6KC79.S1090.p_NIPBL Q6KC79_S1089sS1090s_2_2_1089_1090 Q6KC79 Q6KC79|Q6KC79-2 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16247.16247.3 12 12 3.816 6 2 2 0 885.6656 2495.0531 S1089s S1090s TMT10 1085 (K) YAEIssDEDNDSDEAFESSR (K) Y(0.0)AEIS(0.99)S(0.99)DEDNDS(0.0)DEAFES(0.0)S(0.0)R s:Phosphorylated S NIPBL 318099.5 3 32 50.1 752.87 HUMAN 2 -4.6908 33.9891 PKYTFDFSEEEDDDA-p Q02880;S1375-p PKYTFDFSEEEDDDA 0.89536917010512 0.0101099102642081 -0.0306666666666667 0.404 0.938753547198612 28.0237995085566 -0.0306666666666667 0.404 0.80560962311084 0.00157623166980001 -0.258444044755486 5.84420779938323 Q02880 TOP2B Q02880.S1375.p_TOP2B Q02880_S1375s _1_1_1375_1375 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28131.28415.3 19.64 19.64 4.989 3 1 1 0 1256.1664 3686.519 S1375s TMT10 1370 (K) YTFDFsEEEDDDADDDDDDNNDLEELK (V) Y(0.0)T(0.0)FDFS(0.99)EEEDDDADDDDDDNNDLEELK K:TMT10,s:Phosphorylated S TOP2B 184233.7 5 32 71.1 658.36 HUMAN 1 -0.9388 28.0238 PLAETVFTPKTSPEN-p P49792;T1396-p PLAETVFTPKTSPEN 0.663377338382 0.198772906970298 0.0636666666666667 0.14 3.33505829015123 9.23262686447888 0.0636666666666667 0.14 0.463974562565006 0.119326612969601 0.787682207976422 1.847955781383 P49792 RANBP2 P49792.T1396.p_RANBP2 P49792_T1396t _1_1_1396_1396 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.26884.26884.4 18.21 15.84 1.109 4 1 1 0 791.4196 3082.6825 T1396t TMT10 1384 (K) ELVGPPLAETVFtPKTSPENVQDR (F) ELVGPPLAET(0.0)VFT(0.99)PKT(0.0)S(0.0)PENVQDR K:TMT10,t:Phosphorylated T RANBP2 362585.9 7 22 9.1 1298.62 HUMAN 1 3.3351 9.2326 PLAFDGLSLARHLDE-p Q96CN4-2;S733-p PLAFDGLSLARHLDE 0.233200848442376 0.841584514844592 0.195 -0.0256666666666666 12.1440914371819 1.05315674177282 0.195 -0.0256666666666667 0.0610366734646532 0.784665080394608 2.35791873394585 -0.287131107809277 Q96CN4 EVI5L Q96CN4.2.S733.p_EVI5L Q96CN4-2_S733s _1_1_733_733 Q96CN4-2 Q96CN4-2 Isoform 2 of EVI5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.34063.34063.3 12.23 12.23 99 1 1 1 0 736.7031 2128.1276 S733s TMT10 719 (K) GPPPFEDPLAFDGLsLAR (H) GPPPFEDPLAFDGLS(1.0)LAR s:Phosphorylated S EVI5L 93055.8 2 3 4367.1 32.66 HUMAN 1 12.1441 -1.0532 PLAHLAPSPQSEAVA-p Q9ULH7-5;S22-p PLAHLAPSPQSEAVA 0.929227657659637 0.936260417893531 -0.0276666666666667 -0.0186666666666667 0.633365954288821 0.404202318797482 -0.0276666666666667 -0.0186666666666667 0.864297794091416 0.911128786550515 -0.179202332649768 -0.116924629434091 Q9ULH7 MKL2 Q9ULH7.5.S22.p_MKL2 Q9ULH7-5_S22s_1_1_22_22 Q9ULH7-5 Q9ULH7-5|Q9ULH7-4 Isoform 5 of MKL/myocardin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32118.32118.4 22.48 22.48 1.121 7 1 1 0 1361.6331 5347.5448 M1m S22s Acetyl 1 (-) mDHTGAIDTEDEVGPLAHLAPsPQSEAVAHEFQELSLQSSQNLPPLNER (K) M(1.0)DHT(0.0)GAIDT(0.0)EDEVGPLAHLAPS(0.99)PQS(0.0)EAVAHEFQELS(0.0)LQS(0.0)S(0.0)QNLPPLNER m:Oxidized methionine,s:Phosphorylated S MKL2 119334.1 4 1 464.1 303.55 HUMAN 1 -0.6334 -0.4042 PLALGPESPGEPQPP-p Q5T1M5;S1114-p PLALGPESPGEPQPP 0.516958631742372 0.366787652811398 -0.0903333333333333 0.0886666666666667 5.29094600650507 5.77647746561704 -0.0903333333333333 0.0886666666666667 0.295736820455814 0.26445528673509 -1.15711822527053 1.24435489731813 Q5T1M5 FKBP15 Q5T1M5.S1114.p_FKBP15 Q5T1M5_S1114s _1_1_1114_1114 Q5T1M5 Q5T1M5|Q5T1M5-2 FK506-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30028.30028.3 21.96 19.18 7.146 4 1 1 0 1179.6028 3456.815 S1114s TMT10 1096 (R) LSLTSDPEEGDPLALGPEsPGEPQPPQLK (K) LS(0.0)LT(0.0)S(0.0)DPEEGDPLALGPES(0.99)PGEPQPPQLK K:TMT10,s:Phosphorylated S FKBP15 134140.9 4 16 173.1 487.64 HUMAN 1 -5.2909 5.7765 PLAPSGRSPVEGLGR-p Q9Y5U2;S132-p PLAPSGRSPVEGLGR 0.393487052084588 0.4252714561321 -0.176333333333333 0.0753333333333334 7.47358526024317 4.94202952694719 -0.176333333333333 0.0753333333333334 0.178912825321583 0.320477133407714 -1.5436832771369 1.09320513597166 Q9Y5U2 TSSC4 Q9Y5U2.S132.p_TSSC4 Q9Y5U2_S132s _1_1_132_132 Q9Y5U2 Q9Y5U2|Q9Y5U2-2|A6NCC9 Protein TSSC4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8459.8459.4 10.22 10.22 2.949 2 1 1 0 490.2695 1878.0871 S132s TMT10 124 (K) RPLAPSGRsPVEGLGR (A) RPLAPS(0.0)GRS(0.99)PVEGLGR s:Phosphorylated S TSSC4 34496.1 3 1 2724.1 72.68 HUMAN 1 -7.4736 4.942 PLAQLADSCEGPGLG-p Q9ULE0;S487-p PLAQLADSCEGPGLG 0.616862436970969 0.779506401206205 0.104 -0.0743333333333333 3.89423033684472 1.49782705535939 0.104 -0.0743333333333332 0.407921847883765 0.708300085893557 0.896856902548729 -0.394436586839852 Q9ULE0 WWC3 Q9ULE0.S487.p_WWC3 Q9ULE0_S487s _1_1_487_487 Q9ULE0 Q9ULE0|Q9ULE0-2 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26830.26830.3 18.14 18.14 8.582 2 1 1 0 907.4504 2640.3613 S487s TMT10 478 (R) DSPLAQLADsCEGPGLGALDRLR (A) DS(0.0)PLAQLADS(0.99)CEGPGLGALDRLR C:Carbamidomethylation,s:Phosphorylated S WWC3 123814.7 1 14 161.1 495.35 HUMAN 1 3.8942 -1.4978 PLASPSPSPGRSPQR-p Q8WYP5-2;S1253-p PLASPSPSPGRSPQR 0.481338855387188 0.0866360650499328 -0.124 -0.244333333333333 5.84433496813287 14.0628834953284 -0.124 -0.244333333333333 0.260355348103336 0.0392384325580931 -1.2567830818827 -2.70284111256119 Q8WYP5 AHCTF1 Q8WYP5.2.S1253.p_AHCTF1 Q8WYP5-2_S1253s _1_1_1253_1253 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7559.7559.3 13.6 13.6 1.184 6 1 1 0 677.68 1951.0559 S1253s TMT10 1244 (R) STPLASPSPsPGRSPQR (L) S(0.0)T(0.0)PLAS(0.0)PS(0.0)PS(0.99)PGRS(0.0)PQR s:Phosphorylated S AHCTF1 258049.6 4 13 40.1 829.79 HUMAN 1 -5.8443 -14.0629 PLASRRCSDPSLNEK-p Q13615;S633-p PLASRRCSDPSLNEK 0.320485213901515 0.14166934945483 -0.138 -0.176 9.24958011354999 11.1843264675959 -0.138 -0.176 0.118861714027305 0.0761320200387126 -1.85157534952331 -2.18742841870907 Q13615 MTMR3 Q13615.S633.p_MTMR3 Q13615_S633s _1_1_633_633 Q13615 Q13615|Q13615-2|Q13615-3|G5E953 Myotubularin-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6484.6484.3 10.4 4.58 3.839 2 1 1 0 581.9554 1663.8838 S633s TMT10 631 (R) RCsDPSLNEK (W) RCS(0.99)DPS(0.0)LNEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTMR3 136241 5 6 913.1 201.43 HUMAN 1 -9.2496 -11.1843 PLATGDTSPEPELLP-p O75821;S42-p PLATGDTSPEPELLP 0.702689989895341 0.657054009790675 0.0523333333333333 0.0456666666666667 2.88060751776824 2.49288489813504 0.0523333333333333 0.0456666666666667 0.515156576278466 0.563263371246332 0.696056230633148 0.61530709833139 O75821 EIF3G O75821.S42.p_EIF3G O75821_T41tS42s_2_2_41_42 O75821 O75821|K7EL60 Eukaryotic translation initiation factor 3 subunit G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33708.34306.3 20.18 16.9 2.177 3 2 2 0 1028.203 2922.6592 T41t S42s TMT10 33 (K) GIPLATGDtsPEPELLPGAPLPPPK (E) GIPLAT(0.0)GDT(0.99)S(0.99)PEPELLPGAPLPPPK K:TMT10,t:Phosphorylated T,s:Phosphorylated S EIF3G 35895.6 10 6 2001.1 103.32 HUMAN 1 2.8806 2.4929 PLATRNRTSVDFKDT-p P49902;T510-p PLATRNRTSVDFKDT 0.267348209301553 0.0338849572062542 -0.28 -0.394333333333333 10.856562739596 19.8161442893598 -0.28 -0.394333333333333 0.0821001075501608 0.0104324322032489 -2.13099883147512 -3.83605607791659 P49902 NT5C2 P49902.T510.p_NT5C2 P49902_T510t _1_1_510_510 P49902 P49902 Cytosolic purine 5'-nucleotidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11984.11984.3 7.92 7.92 1.13 4 1 1 0 786.0758 2276.249 T510t TMT10 508 (R) NRtSVDFKDTDYK (R) NRT(0.99)S(0.0)VDFKDT(0.0)DY(0.0)K K:TMT10,t:Phosphorylated T NT5C2 65425 3 3 3141.1 59.52 HUMAN 1 -10.8566 -19.8161 PLCFDPGSPASDKTE-p Q96KM6;S63-p PLCFDPGSPASDKTE 0.957435127352516 0.0706127236842691 -0.00800000000000001 -0.227 0.368024222598003 15.3037863723605 -0.00800000000000001 -0.227 0.918750477358371 0.0294863735256547 -0.106859506131983 -2.93366104679704 Q96KM6 ZNF512B Q96KM6.S63.p_ZNF512B Q96KM6_S63s _1_1_63_63 Q96KM6 Q96KM6 Zinc finger protein 512B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19928.19928.4 19.52 19.52 2.754 4 1 1 0 842.926 3288.7138 S63s TMT10 47 (R) GGQTVPGQAPLCFDPGsPASDKTEGK (K) GGQT(0.0)VPGQAPLCFDPGS(0.99)PAS(0.0)DKT(0.0)EGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF512B 98802.8 2 1 2035.1 101.41 HUMAN 1 -0.368 -15.3038 PLDCGSASPNKVASS-p O75179;S2067-p PLDCGSASPNKVASS 0.304083496843647 0.00404124447761282 -0.301666666666667 -0.562 9.68633681275186 35.2551183766102 -0.301666666666667 -0.562 0.107489568312533 0.000298186626942758 -1.92726422137754 -8.18860732499465 O75179 ANKRD17 O75179.S2067.p_ANKRD17 O75179_S2067s _1_1_2067_2067 O75179 O75179|O75179-2|O75179-7|O75179-6|O75179-4 Ankyrin repeat domain-containing protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10359.10359.3 15.9 15.9 1.138 3 1 1 0 628.968 1804.9264 S2067s TMT10 2058 (R) NSPLDCGSAsPNK (V) NS(0.0)PLDCGS(0.0)AS(0.99)PNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANKRD17 276135.9 3 13 287.2 383.69 HUMAN 1 -9.6863 -35.2551 PLEELRPSPRGQNVG-p F8W130;S98-p PLEELRPSPRGQNVG 0.295859280573991 0.0183493480020015 0.244666666666667 -0.352 9.96049783373257 23.895738030886 0.244666666666667 -0.352 0.100913720159163 0.00407780258565433 1.97484837903047 -4.76382244112174 F8W130 TROAP F8W130.S98.p_TROAP F8W130_S98s _1_1_98_98 F8W130 F8W130|Q12815 Tastin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15674.15674.3 8.02 5.59 99 1 1 1 0 539.617 1536.8696 S98s TMT10 90 (R) NPLEELRPsPR (G) NPLEELRPS(1.0)PR s:Phosphorylated S TROAP 95330.1 1 2 1545.1 132.83 HUMAN 1 9.9605 -23.8957 PLEFADKSPTPPNLP-p A7KAX9;S1234-p PLEFADKSPTPPNLP 0.049158581421578 0.627598483167507 -0.463666666666667 -0.05 29.0139540894701 2.7517285615049 -0.463666666666667 -0.05 0.00125488691563409 0.530673185775413 -6.13763718233424 -0.669428533317559 A7KAX9 ARHGAP32 A7KAX9.S1234.p_ARHGAP32 A7KAX9_S1234sT1236t_2_2_1234_1236 A7KAX9 A7KAX9|A7KAX9-2 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18776.18776.4 19.17 19.17 8.31 3 2 2 0 797.6592 3027.6871 S1234s T1236t TMT10 1224 (K) LHHPLEFADKsPtPPNLPSDK (I) LHHPLEFADKS(0.99)PT(0.99)PPNLPS(0.0)DK K:TMT10,s:Phosphorylated S,t:Phosphorylated T ARHGAP32 232236.5 1 31 159.1 497.4 HUMAN 1 -29.014 -2.7517 PLEFLDDSDSHLEIQ-p Q93075;S308-p PLEFLDDSDSHLEIQ 0.468631761933813 0.0965712209027386 0.104666666666667 -0.234666666666667 6.07738251468282 13.4234857895005 0.104666666666667 -0.234666666666667 0.246752606284833 0.0454623018374372 1.29833692602405 -2.5861896130419 Q93075 TATDN2 Q93075.S308.p_TATDN2 Q93075_S299sS308s_2_2_299_308 Q93075 Q93075 Putative deoxyribonuclease TATDN2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27761.27761.4 11.97 9.03 1.145 4 2 2 0 909.2016 3473.8441 S299s S308s TMT10 293 (R) TVIDKCsPPLEFLDDsDSHLEIQK (H) T(0.0)VIDKCS(0.99)PPLEFLDDS(0.99)DS(0.0)HLEIQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TATDN2 86048.5 1 8 1656.1 123.28 HUMAN 1 6.0774 -13.4235 PLEKEPHSPADQPEQ-p Q9H2Y7;S1328-p PLEKEPHSPADQPEQ 0.808652261368213 0.00242886472052485 -0.043 -0.734666666666667 1.771312912695 40.1080505731356 -0.043 -0.734666666666667 0.665072068323183 9.75427381624902e-05 -0.457540174974903 -10.1800699673009 Q9H2Y7 ZNF106 Q9H2Y7.S1328.p_ZNF106 Q9H2Y7_S1328s _1_1_1328_1328 Q9H2Y7 Q9H2Y7|Q9H2Y7-2|A0A0C4DGM5 Zinc finger protein 106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21071.21071.5 29.69 29.69 3.737 9 1 1 0 850.8158 4170.0879 S1328s TMT10 1314 (R) LSFASETPLEKEPHsPADQPEQQAESTLTSAETR (G) LS(0.0)FAS(0.0)ET(0.0)PLEKEPHS(0.99)PADQPEQQAES(0.0)T(0.0)LT(0.0)S(0.0)AET(0.0)R K:TMT10,s:Phosphorylated S ZNF106 210818.9 4 10 170.1 490.3 HUMAN 1 -1.7713 -40.1081 PLEKQQLSPSPGQEA-p Q17RY0;S97-p PLEKQQLSPSPGQEA 0.200490039743514 0.632379182346825 -0.209666666666667 -0.0526666666666667 13.5820704493965 2.70490028232336 -0.209666666666667 -0.0526666666666667 0.0438321683094383 0.536426188096689 -2.61650094139999 -0.659721784740266 Q17RY0 CPEB4 Q17RY0.S97.p_CPEB4 Q17RY0_S97sS99s_2_2_97_99 Q17RY0 Q17RY0|Q17RY0-2|B7ZLQ8|E5RJM0 Cytoplasmic polyadenylation element-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22542.22542.3 14.26 14.26 14.26 3 2 2 0 876.4293 2467.3444 S97s S99s TMT10 94 (K) QQLsPsPGQEAGILPETEK (A) QQLS(0.99)PS(0.99)PGQEAGILPET(0.0)EK K:TMT10,s:Phosphorylated S CPEB4 80778.1 1 5 1827.1 112.47 HUMAN 1 -13.5821 -2.7049 PLEPRPVSPSAYMLR-p Q9BT49;S210-p PLEPRPVSPSAYMLR 0.194757567047236 0.316476458953244 0.200666666666667 0.106 13.8626793465222 6.60286198740875 0.200666666666667 0.106 0.0410896143664467 0.218632037064541 2.66774065420987 1.39093838948789 Q9BT49 THAP7 Q9BT49.S210.p_THAP7 Q9BT49_S210s _1_1_210_210 Q9BT49 Q9BT49 THAP domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.34125.34125.5 12.02 12.02 1.198 9 1 1 0 1134.545 5588.7991 S210s TMT10 167 (R) LEPGLSSPFSDLLGPLGAQADEAGCSAQPSPERQPSPLEPRPVsPSAYMLR (L) LEPGLS(0.0)S(0.0)PFS(0.0)DLLGPLGAQADEAGCS(0.0)AQPS(0.0)PERQPS(0.0)PLEPRPVS(0.99)PS(0.0)AY(0.0)MLR C:Carbamidomethylation,s:Phosphorylated S THAP7 35041.1 4 2 3510.1 49.47 HUMAN 1 13.8627 6.6029 PLESDEDSNDNDNDI-p Q9Y4E8;S965-p PLESDEDSNDNDNDI 0.295108437438978 0.0622997837579997 0.162 0.249333333333333 9.99574720582477 16.0433998809543 0.162 0.249333333333333 0.100097972166118 0.0248690967500409 1.98097160475311 3.07434832396514 Q9Y4E8 USP15 Q9Y4E8.S965.p_USP15 Q9Y4E8_S961sS965s_2_2_961_965 Q9Y4E8 Q9Y4E8|Q9Y4E8-3|Q9Y4E8-2 Ubiquitin carboxyl-terminal hydrolase 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17792.17792.3 23.88 24.09 7.509 5 2 2 0 1285.4891 3678.5241 S961s S965s M978m TMT10 950 (K) GASAATGIPLEsDEDsNDNDNDIENENCmHTN (-) GAS(0.0)AAT(0.0)GIPLES(0.99)DEDS(0.99)NDNDNDIENENCM(1.0)HT(0.0)N C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine USP15 113672.2 12 11 1214.1 165.83 HUMAN 1 9.9957 16.0434 PLEVMKASQQAIERG-p Q8TDM6;S1775-p PLEVMKASQQAIERG 0.956377995118809 0.212923204289966 -0.00833333333333333 0.123333333333333 0.379984267594369 8.83897381939446 -0.00833333333333333 0.123333333333333 0.916223809155307 0.130647955555839 -0.110198303489728 1.77986111830056 Q8TDM6 DLG5 Q8TDM6.S1775.p_DLG5 Q8TDM6_S1775s _1_1_1775_1775 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2|Q8TDM6-5 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17598.17598.3 9.34 6.01 99 1 1 1 0 766.731 2218.2088 S1775s TMT10 1767 (R) CPLEVMKAsQQAIER (G) CPLEVMKAS(1.0)QQAIER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DLG5 215575.4 2 40 34.1 890.58 HUMAN 1 -0.38 8.839 PLFRNPMSDPKKKEE-p P52948;S524-p PLFRNPMSDPKKKEE 0.85770238669209 0.80906919650658 0.041 0.048 1.29995891019515 1.28908343244728 0.041 0.048 0.74131725507579 0.743175966760715 0.347515136409959 0.344863166897836 P52948 NUP98 P52948.S524.p_NUP98 P52948_S524s _1_1_524_524 P52948 P52948|P52948-5|P52948-2 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10042.10042.2 10.22 5.29 99 1 1 1 0 663.83 1246.6866 S524s TMT10 521 (R) NPMsDPK (K) NPMS(1.0)DPK K:TMT10,s:Phosphorylated S NUP98 198716.8 1 1 187.1 472.84 HUMAN 1 1.3 1.2891 PLGEALRSGQARRSS-p Q9NX40;S116-p PLGEALRSGQARRSS 0.781653221369656 0.015578970732713 -0.042 -0.401 2.05312293672876 24.9871048761921 -0.042 -0.401 0.623286479739793 0.00317168108637196 -0.520534617491791 -5.03423244742767 Q9NX40 OCIAD1 Q9NX40.S116.p_OCIAD1 Q9NX40_S108sS116s_2_2_108_116 Q9NX40 Q9NX40|D6RBN5|Q9NX40-4|Q9NX40-2|Q9NX40-3|D6RIV2 OCIA domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14261.14261.3 8.2 8.2 99 2 2 2 0 815.4192 2284.3137 S108s S116s TMT10 104 (K) KLENsPLGEALRsGQAR (R) KLENS(1.0)PLGEALRS(1.0)GQAR K:TMT10,s:Phosphorylated S OCIAD1 27796.8 1 5 2651.1 75.21 HUMAN 1 -2.0531 -24.9871 PLGFARASPSPPAHA-p O75385;S477-p PLGFARASPSPPAHA 0.539507901385774 0.252338880470838 -0.201 -0.232333333333333 4.95123430439387 7.87524143609108 -0.201 -0.232333333333333 0.319798608380688 0.163108223041869 -1.09511389899548 -1.61300775812817 O75385 ULK1 O75385.S477.p_ULK1 O75385_S477sS479s_2_2_477_479 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7813.7813.3 16.31 16.31 99 2 2 2 0 681.6512 1883.0085 S477s S479s TMT10 476 (R) AsPsPPAHAEHGGVLAR (K) AS(1.0)PS(1.0)PPAHAEHGGVLAR s:Phosphorylated S ULK1 113656.3 2 22 351.1 351.01 HUMAN 1 -4.9512 -7.8752 PLGGGEPSPGAGEPS-p Q9ULL5-3;S340-p PLGGGEPSPGAGEPS 0.780347461479418 0.169333941834546 0.0433333333333333 0.138666666666667 2.07104871550462 10.1403655567984 0.0433333333333333 0.138666666666667 0.620719127564937 0.0968196357261986 0.524479423624385 2.00528387063776 Q9ULL5 PRR12 Q9ULL5.3.S340.p_PRR12 Q9ULL5-3_S340s _1_1_340_340 Q9ULL5-3 Q9ULL5-3 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17872.17872.3 19.72 19.72 6.191 3 1 1 0 864.425 2511.2914 S340s TMT10 327 (R) ANLACSPLGGGEPsPGAGEPSK (A) ANLACS(0.0)PLGGGEPS(0.99)PGAGEPS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRR12 212010 3 4 182.1 477.91 HUMAN 1 2.071 10.1404 PLGGRDDSPVSHRAS-p Q14004-2;S325-p PLGGRDDSPVSHRAS 0.543504741067789 0.229981084591192 0.105666666666667 0.272 4.88821938837873 8.40872694190537 0.105666666666667 0.272 0.324472624174123 0.144253814430832 1.08353335492911 1.70543045159321 Q14004 CDK13 Q14004.2.S325.p_CDK13 Q14004-2_S315sS317sS325s_3_3_315_325 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5022.5022.4 10.52 10.52 2.566 4 3 3 0 558.7427 1992.0482 S315s S317s S325s Hydrogen 313 (R) RRsLsPLGGRDDsPVSHR (A) RRS(0.99)LS(0.99)PLGGRDDS(0.99)PVS(0.0)HR s:Phosphorylated S CDK13 159173.6 3 26 145.1 520.12 HUMAN 1 4.8882 8.4087 PLGGRELSQGLLPLP-p A0A0A0MR66;S331-p PLGGRELSQGLLPLP 0.859564008462243 0.181280522261231 0.068 0.412 1.28344593583298 9.75481683783021 0.068 0.412 0.744141296186516 0.105807953918755 0.34354076890759 1.93838120791963 A0A0A0MR66 RBM10 A0A0A0MR66.S331.p_RBM10 A0A0A0MR66_S331s _1_1_331_331 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.35378.35378.4 20.74 18.64 6.625 8 1 1 0 1183.1049 4649.426 S331s TMT10 329 (R) ELsQGLLPLPQPYQAQGVLASQALSQGSEPSSENANDTIILR (N) ELS(0.99)QGLLPLPQPY(0.0)QAQGVLAS(0.0)QALS(0.0)QGS(0.0)EPS(0.0)S(0.0)ENANDT(0.0)IILR s:Phosphorylated S RBM10 110706.4 2 6 270.1 394.36 HUMAN 1 1.2834 9.7548 PLGHGWMSHEDLRAR-p Q9UPU9;S272-p PLGHGWMSHEDLRAR 0.658549271083176 0.745063438987604 -0.0616666666666667 -0.0346666666666666 3.40441640584595 1.76386873366769 -0.0616666666666667 -0.0346666666666666 0.456623606027449 0.666213036334748 -0.801422123502591 -0.455799258908993 Q9UPU9 SAMD4A Q9UPU9.S272.p_SAMD4A Q9UPU9_S272s_1_1_272_272 Q9UPU9 Q9UPU9|Q9UPU9-2 Protein Smaug homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24206.24206.4 12.58 12.58 0.151 4 1 1 0 803.1369 3128.5607 N260n S272s TMT10 252 (R) SVSLTPPMnVPNQPLGHGWMsHEDLR (A) S(0.0)VS(0.0)LT(0.0)PPMN(0.50)VPN(0.50)QPLGHGWMS(0.99)HEDLR n:Deamidated,s:Phosphorylated S SAMD4A 80097.9 1 5 2441.1 83.32 HUMAN 1 -3.4044 -1.7639 PLGIEDISPNLSPDD-p A6NNK5;S1381-p PLGIEDISPNLSPDD 0.578040886243326 0.0764839388560517 0.0966666666666667 0.249666666666667 4.37911359544142 14.8142857730775 0.0966666666666667 0.249666666666667 0.364828401603746 0.0330043681384327 0.988938618003479 2.84186600663394 A6NNK5 TP53BP1 A6NNK5.S1381.p_TP53BP1 A6NNK5_S1381sS1385s_2_2_1381_1385 A6NNK5 A6NNK5 TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28123.28123.4 14.02 14.02 14.019 3 2 2 0 788.6486 2991.6403 S1381s S1385s TMT10 1366 (K) LRETAVPGPLGIEDIsPNLsPDDK (S) LRET(0.0)AVPGPLGIEDIS(0.99)PNLS(0.99)PDDK K:TMT10,s:Phosphorylated S TP53BP1 211012.5 1 1 3.3 2297.07 HUMAN 1 4.3791 14.8143 PLGLPQASPSRTRSP-p Q6P2E9;S723-p PLGLPQASPSRTRSP 0.732651492896551 0.0458593587768006 -0.0536666666666667 -0.343666666666667 2.55919961196934 17.9106553629456 -0.0536666666666667 -0.343666666666667 0.554727937763693 0.0161783588310349 -0.629365007506478 -3.44140642347426 Q6P2E9 EDC4 Q6P2E9.S723.p_EDC4 Q6P2E9_T693tS723s_2_2_693_723 Q6P2E9 Q6P2E9|Q6P2E9-2 Enhancer of mRNA-decapping protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37121.37121.5 18.74 18.74 1.383 7 2 2 0 1132.6202 5499.1445 T693t S723s TMT10 679 (R) GLLPGLLPAPADKLtPKGPGQVPTATSALSLELQEVEPLGLPQAsPSR (T) GLLPGLLPAPADKLT(0.99)PKGPGQVPT(0.0)AT(0.0)S(0.0)ALS(0.0)LELQEVEPLGLPQAS(0.99)PS(0.0)R K:TMT10,t:Phosphorylated T,s:Phosphorylated S EDC4 153084.9 1 24 177.1 481.34 HUMAN 1 -2.5592 -17.9107 PLGPLAGSPVIAAAN-p P68400;S370-p PLGPLAGSPVIAAAN 0.525584911569017 0.184419246837608 -0.107 0.199666666666667 5.16726241139321 9.65187038657285 -0.107 0.199666666666667 0.304280246116001 0.108346019709789 -1.13462333188509 1.92054034458247 P68400 CSNK2A1 P68400.S370.p_CSNK2A1 P68400_S370s_1_1_370_370 P68400 P68400|P68400-2 Casein kinase II subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36146.36146.4 10.48 10.48 0 13 1 1 0 1418.4343 5574.7612 M352m S370s TMT10 334 (R) MGSSSMPGGSTPVSSANMmSGISSVPTPSPLGPLAGsPVIAAANPLGMPVPAAAGAQQ (-) M(0.25)GS(0.0)S(0.0)S(0.0)M(0.25)PGGS(0.0)T(0.0)PVS(0.0)S(0.0)ANM(0.25)M(0.25)S(0.0)GIS(0.0)S(0.0)VPT(0.0)PS(0.0)PLGPLAGS(0.99)PVIAAANPLGM(0.0)PVPAAAGAQQ m:Oxidized methionine,s:Phosphorylated S CSNK2A1 45256.9 1 9 2696.1 73.72 HUMAN 1 -5.1673 9.6519 PLGSAVSSPVLFSPV-p Q8WUM0;S45-p PLGSAVSSPVLFSPV 0.957810192524261 0.322470190948865 0.00866666666666666 -0.101333333333333 0.363122920382522 6.49874363498775 0.00866666666666667 -0.101333333333333 0.919787933716499 0.223936886906026 0.105488997743241 -1.37260051353101 Q8WUM0 NUP133 Q8WUM0.S45.p_NUP133 Q8WUM0_S45s _1_1_45_45 Q8WUM0 Q8WUM0 Nuclear pore complex protein Nup133 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30496.31019.2 18.69 16.52 1.119 4 1 1 0 1075.0841 2069.1956 S45s TMT10 36 (K) GLPLGSAVSsPVLFSPVGR (R) GLPLGS(0.0)AVS(0.0)S(0.99)PVLFS(0.0)PVGR s:Phosphorylated S NUP133 130003.6 7 4 652.1 254.15 HUMAN 1 0.3631 -6.4987 PLGSRSQTPSPSTLN-p Q6GYQ0-2;T1002-p PLGSRSQTPSPSTLN 0.472379749153772 0.655449414306555 0.104666666666667 -0.048 6.00653908647903 2.50751147264105 0.104666666666667 -0.048 0.250810717946833 0.561369551226805 1.28572839482627 -0.618396661753769 Q6GYQ0 RALGAPA1 Q6GYQ0.2.T1002.p_RALGAPA1 Q6GYQ0-2_T1002t _1_1_1002_1002 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7|Q6GYQ0-4|Q6GYQ0-3 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15213.15213.3 16.03 16.03 1.206 5 1 1 0 817.7387 2371.2328 T1002t TMT10 1000 (R) SQtPSPSTLNIDHMEQK (D) S(0.0)QT(0.99)PS(0.0)PS(0.0)T(0.0)LNIDHMEQK K:TMT10,t:Phosphorylated T RALGAPA1 236609.9 2 16 317.1 366.49 HUMAN 1 6.0065 -2.5075 PLHIQIKSPQESTGD-p Q9UHF7-2;S1054-p PLHIQIKSPQESTGD 0.153659299640324 0.271846944958485 -0.243333333333333 -0.122333333333333 16.3456378753882 7.45041431349616 -0.243333333333333 -0.122333333333333 0.023197234482985 0.179869931245368 -3.13484086297198 -1.53919498574839 Q9UHF7 TRPS1 Q9UHF7.2.S1054.p_TRPS1 Q9UHF7-2_S1054s _1_1_1054_1054 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18112.18112.5 19.1 17.85 2.268 7 1 1 0 741.9799 3625.9099 S1054s TMT10 1045 (R) MQPLHIQIKsPQESTGDPGNSSSVSEGK (G) MQPLHIQIKS(0.99)PQES(0.0)T(0.0)GDPGNS(0.0)S(0.0)S(0.0)VS(0.0)EGK K:TMT10,s:Phosphorylated S TRPS1 145246 12 34 14.1 1150.14 HUMAN 1 -16.3456 -7.4504 PLIERLGTPQQIAIA-p Q7L576-2;T637-p PLIERLGTPQQIAIA 0.158414346785039 0.239217828752045 -0.235333333333333 -0.118 16.0292557616279 8.18444542643278 -0.235333333333333 -0.118 0.024950222553328 0.151899189774802 -3.07380971152491 -1.66660152469892 Q7L576 CYFIP1 Q7L576.2.T637.p_CYFIP1 Q7L576-2_T637t _1_1_637_637 Q7L576-2 Q7L576|Q96F07-2|E7EVJ5|H7C229|E7EW33|Q7L576-2 Isoform 2 of Cytoplasmic FMR1-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17576.17576.3 10.04 10.04 99 1 1 1 0 492.9426 1396.8474 T637t TMT10 635 (R) LGtPQQIAIAR (E) LGT(1.0)PQQIAIAR t:Phosphorylated T CYFIP1 95720.1 2 5 2806.1 69.96 HUMAN 1 -16.0293 -8.1844 PLIIRPDSGNPLDTV-p P43490;S314-p PLIIRPDSGNPLDTV 0.916582629174307 0.0964557629450096 -0.016 0.261333333333333 0.738135372137222 13.4302171703927 -0.016 0.261333333333333 0.84369691827417 0.0453918917716996 -0.206837876609261 2.58741031335379 P43490 NAMPT P43490.S314.p_NAMPT P43490_S314s _1_1_314_314 P43490 P43490|A0A0C4DFS8 Nicotinamide phosphoribosyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28823.28823.4 14.84 12.04 3.408 4 1 1 0 694.1387 2693.5602 S314s TMT10 303 (R) STQAPLIIRPDsGNPLDTVLK (V) S(0.0)T(0.0)QAPLIIRPDS(0.99)GNPLDT(0.0)VLK K:TMT10,s:Phosphorylated S NAMPT 55805.4 1 2 5383.1 19.84 HUMAN 1 -0.7381 13.4302 PLIKLFYTLLIMGIF-p Q92736-2;T1827-p PLIKLFYTLLIMGIF 0.386240879421881 0.775056945304105 -0.159333333333333 0.096 7.64669682267631 1.53025285841443 -0.159333333333333 0.096 0.171921549899129 0.703031386235311 -1.57380500767627 0.402020299308882 Q92736 RYR2 Q92736.2.T1827.p_RYR2 Q92736-2_T1827t_1_1_1827_1827 Q92736-2 Q92736-2|H7BY35 Isoform 2 of Ryanodine receptor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16904.16904.4 10.38 4.99 1.193 2 1 1 0 599.063 2296.2613 T1827t M1831m N1836n Hydrogen 1824 (K) LFYtLLImGIFHnEDLK (H) LFY(0.0)T(0.99)LLIM(1.0)GIFHN(1.0)EDLK K:TMT10-Lys-Only,t:Phosphorylated T,m:Oxidized methionine,n:Deamidated RYR2 570536.2 2 1 5126.1 22.62 HUMAN 1 -7.6467 1.5303 PLILRGLTPPASYNL-p X6RLX0;T1050-p PLILRGLTPPASYNL 0.270306349949084 0.46363675616598 0.22 0.0723333333333334 10.7654427878261 4.45138301277261 0.22 0.0723333333333334 0.0838408593758518 0.358807653987372 2.11506574816727 1.00230271456638 X6RLX0 ERC1 X6RLX0.T1050.p_ERC1 X6RLX0_T1050t _1_1_1050_1050 X6RLX0 X6RLX0|Q8IUD2|Q8IUD2-3|G8JLD3 ELKS/Rab6-interacting/CAST family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27840.27840.4 18.07 19.46 3.397 3 1 1 0 779.1288 3033.5206 T1050t TMT10 1048 (R) GLtPPASYNLDDDQAAWENELQK (M) GLT(0.99)PPAS(0.0)Y(0.0)NLDDDQAAWENELQK K:TMT10,t:Phosphorylated T ERC1 128700.8 1 11 904.1 203.11 HUMAN 1 10.7654 4.4514 PLKALWRSPKYDKVE-p Q9H0I2;S136-p PLKALWRSPKYDKVE 0.212264138240011 0.00804134374262617 -0.282333333333333 -0.641666666666667 12.9900501325542 29.8516758490782 -0.282333333333333 -0.641666666666667 0.0502336790790699 0.00103474280461942 -2.50927416436248 -6.37707991171838 Q9H0I2 ENKD1 Q9H0I2.S136.p_ENKD1 Q9H0I2_S136s _1_1_136_136 Q9H0I2 Q9H0I2|R4GN60 Enkurin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13605.13605.4 11.94 5.19 5.194 2 1 1 0 508.5398 1951.1732 S136s TMT10 132 (K) ALWRsPKYDK (V) ALWRS(0.99)PKY(0.0)DK K:TMT10,s:Phosphorylated S ENKD1 39043.7 1 1 6383.1 11.94 HUMAN 1 -12.9901 -29.8517 PLKGGLNTPLHESDF-p Q99459;T385-p PLKGGLNTPLHESDF 0.311452448110121 0.0550291207967345 0.255 -0.243 9.47629390961614 16.7791589194565 0.255 -0.243 0.112815977063857 0.0209934641617905 1.89084993499637 -3.21685239401953 Q99459 CDC5L Q99459.T385.p_CDC5L Q99459_T385t _1_1_385_385 Q99459 Q99459 Cell division cycle 5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15609.15609.3 18.41 18.41 6.933 4 1 1 0 774.3757 2241.1461 T385t TMT10 381 (K) GGLNtPLHESDFSGVTPQR (Q) GGLNT(0.99)PLHES(0.0)DFS(0.0)GVT(0.0)PQR t:Phosphorylated T CDC5L 92477.2 1 8 751.1 232.35 HUMAN 1 9.4763 -16.7792 PLKGTCRTPSVLSQQ-p A0JNW5;T441-p PLKGTCRTPSVLSQQ 0.630876191284673 0.0705656450953409 -0.065 -0.216666666666667 3.72270068554913 15.3100201340987 -0.065 -0.216666666666667 0.424355593879691 0.0294440798335171 -0.863738030986773 -2.93483662432618 A0JNW5 UHRF1BP1L A0JNW5.T441.p_UHRF1BP1L A0JNW5_T441t _1_1_441_441 A0JNW5 A0JNW5|A0A0C4DGH6|A0JNW5-2 UHRF1-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9244.9244.3 9.69 5.14 1.103 5 1 1 0 696.363 2007.1057 T441t TMT10 437 (K) GTCRtPSVLSQQSK (A) GT(0.0)CRT(0.99)PS(0.0)VLS(0.0)QQS(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T UHRF1BP1L 165621.9 1 3 398.1 328.88 HUMAN 1 -3.7227 -15.31 PLKISSVSEVMKESK-p Q16891-2;S115-p PLKISSVSEVMKESK 0.869109032102365 0.00849512656348506 0.0253333333333333 0.466 1.18979647558436 29.3901485098108 0.0253333333333333 0.466 0.760361909119184 0.00115076103725265 0.3208319197746 6.23907393051965 Q16891 IMMT Q16891.2.S115.p_IMMT Q16891-2_S115s _1_1_115_115 Q16891-2 Q16891|Q16891-4|Q16891-2|Q16891-3|B9A067|C9J406|A0A087WYS0|D6RAW4 Isoform 2 of MICOS complex subunit MIC60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21083.21083.2 14.03 7.88 2.523 3 1 1 0 759.4052 1437.8387 S115s TMT10 111 (K) ISSVsEVMK (E) IS(0.0)S(0.0)VS(0.99)EVMK K:TMT10,s:Phosphorylated S IMMT 83022.6 2 5 1057.1 182.65 HUMAN 1 1.1898 29.3901 PLKKQPPSFPGAAEE-p Q12789;S534-p PLKKQPPSFPGAAEE 0.468720713206654 0.0202576394847618 0.1 0.654666666666667 6.0750155845117 23.1872939666382 0.1 0.654666666666667 0.246887124542872 0.00480032457556426 1.29791598207954 4.59364456475663 Q12789 GTF3C1 Q12789.S534.p_GTF3C1 Q12789_S534s _1_1_534_534 Q12789 Q12789|Q12789-3 General transcription factor 3C polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12486.12486.3 9.34 9.34 99 1 1 1 0 651.3383 1872.038 S534s TMT10 530 (K) KQPPsFPGAAEER (A) KQPPS(1.0)FPGAAEER K:TMT10,s:Phosphorylated S GTF3C1 241209.8 1 2 225.1 425.73 HUMAN 1 6.075 23.1873 PLKMEPQSPGEVKKL-p Q03112-3;S726-p PLKMEPQSPGEVKKL 0.535980313174196 0.283131518318113 -0.0926666666666667 -0.117666666666667 5.01345264367019 7.22515455191201 -0.0926666666666667 -0.117666666666667 0.315249738961271 0.189445609535087 -1.10652281017635 -1.49994277275583 Q03112 MECOM Q03112.3.S726.p_MECOM Q03112-3_S726s _1_1_726_726 Q03112-3 Q03112-3|E7EQ57|Q03112-4|A0A0C3SFZ7|Q03112-6 Isoform 2 of MDS1 and EVI1 complex locus protein EVI1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18162.18162.5 16.22 16.22 16.22 2 1 1 0 553.7227 2684.6191 S726s TMT10 717 (R) SLPLKMEPQsPGEVKK (L) S(0.0)LPLKMEPQS(0.99)PGEVKK K:TMT10,s:Phosphorylated S MECOM 141074 10 5 937.1 198.37 HUMAN 1 -5.0135 -7.2252 PLKNQTYSFSPSKSY-p Q86YS7-3;S293-p PLKNQTYSFSPSKSY 0.00874686268802314 0.00248584650157384 -1.67066666666667 -1.13666666666667 50.5741510550175 39.8482731203365 -1.67066666666667 -1.13666666666667 8.76162970433713e-06 0.000103555385079505 -16.1374354211393 -10.0633242462775 Q86YS7 C2CD5 Q86YS7.3.S293.p_C2CD5 Q86YS7-3_S293sS295s_2_2_293_295 Q86YS7-3 Q86YS7-3 Isoform 3 of C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15113.15113.3 11.81 11.81 3.601 5 2 2 0 592.9399 1616.8684 S293s S295s TMT10 289 (K) NQTYsFsPSK (S) NQT(0.0)Y(0.0)S(0.99)FS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S C2CD5 117622.7 3 19 349.1 351.16 HUMAN 1 -50.5742 -39.8483 PLKPQVHTPVATVKQ-p A0A0U1RQQ9;T712-p PLKPQVHTPVATVKQ 0.481533495886899 0.00712966319785279 -0.110666666666667 -0.462 5.84112220623737 30.7563484247103 -0.110666666666667 -0.462 0.260548021334286 0.000840166106563702 -1.25620864486614 -6.65468617050263 A0A0U1RQQ9 NotFound A0A0U1RQQ9.T712.p_NotFound A0A0U1RQQ9_T712t _1_1_712_712 A0A0U1RQQ9 A0A0U1RQQ9 SCY1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12833.12833.4 18.11 18.11 4.135 3 1 1 0 657.1335 2545.5433 T712t TMT10 702 (K) SQQPLKPQVHtPVATVK (Q) S(0.0)QQPLKPQVHT(0.99)PVAT(0.0)VK K:TMT10,t:Phosphorylated T SCYL2 104795 1 4 1113.1 175.8 HUMAN 1 -5.8411 -30.7563 PLKPYPVSPSDKVLI-p J3KR24;S937-p PLKPYPVSPSDKVLI 0.237912707669171 0.0503111131003471 -0.272333333333333 0.260666666666667 11.9394034905936 17.3533000567205 -0.272333333333333 0.260666666666667 0.0639822709971331 0.0183937379244475 -2.32159105759854 3.32994389622671 J3KR24 NotFound J3KR24.S937.p_NotFound J3KR24_S937s _1_1_937_937 J3KR24 P41252|A0A0A0MSX9|J3KR24|Q5TCC6 Isoleucine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16572.16779.3 16.47 16.47 1.577 3 1 1 0 722.7447 2086.2515 S937s TMT10 929 (K) APLKPYPVsPSDK (V) APLKPY(0.0)PVS(0.99)PS(0.0)DK K:TMT10,s:Phosphorylated S IARS 132902.3 8 3 2902.1 66.43 HUMAN 1 -11.9394 17.3533 PLKRRRVSFGGHLRP-p P46013;S507-p PLKRRRVSFGGHLRP 0.397712293061704 0.0118634826297909 0.122666666666667 -0.426333333333333 7.39215616632585 26.9155088986909 0.122666666666667 -0.426333333333333 0.182299040727332 0.00203445978743703 1.52949837781164 -5.53824326214003 P46013 MKI67 P46013.S507.p_MKI67 P46013_S507s _1_1_507_507 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23267.23267.4 13.88 7.8 12.838 2 1 1 0 818.6916 3191.773 S507s TMT10 505 (R) RVsFGGHLRPELFDENLPPNTPLK (R) RVS(0.99)FGGHLRPELFDENLPPNT(0.0)PLK K:TMT10,s:Phosphorylated S MKI67 360912.4 1 9 5.1 1918.46 HUMAN 1 7.3922 -26.9155 PLKSRSFSLASSSNS-p Q9BXB4;S174-p PLKSRSFSLASSSNS 0.873924765209023 0.542620341187739 -0.0256666666666667 -0.109666666666667 1.14580830514587 3.57320021642786 -0.0256666666666667 -0.109666666666667 0.768102483802637 0.439217846606248 -0.310063346735867 -0.834482919319415 Q9BXB4 OSBPL11 Q9BXB4.S174.p_OSBPL11 Q9BXB4_S174s _1_1_174_174 Q9BXB4 Q9BXB4 Oxysterol-binding protein-related protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17661.17661.2 16.13 16.13 3.141 7 1 1 0 938.9536 1796.934 S174s TMT10 172 (R) SFsLASSSNSPISQR (R) S(0.0)FS(0.99)LAS(0.0)S(0.0)S(0.0)NS(0.0)PIS(0.0)QR s:Phosphorylated S OSBPL11 84383.5 3 3 1360.1 150.18 HUMAN 1 -1.1458 -3.5732 PLLDRARSRTPPSAP-p Q9UQ35;S2407-p PLLDRARSRTPPSAP 0.769821611108112 0.340014654684609 0.0546666666666667 0.203666666666667 2.17685321868103 6.20606756820487 0.0546666666666667 0.203666666666667 0.605779647456121 0.23954838275233 0.547620766873432 1.32086655155546 Q9UQ35 SRRM2 Q9UQ35.S2407.p_SRRM2 Q9UQ35_S2407sT2409t_2_2_2407_2409 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.2874.2874.3 10.57 10.57 10.566 5 2 2 0 553.2449 1497.7881 S2407s T2409t Hydrogen 2405 (R) ARsRtPPSAPSQSR (M) ARS(0.99)RT(0.99)PPS(0.0)APS(0.0)QS(0.0)R s:Phosphorylated S,t:Phosphorylated T SRRM2 300351.7 9 240 2.1 3310.34 HUMAN 1 2.1769 6.2061 PLLEEQCSIDEPLFE-p Q9P031;S129-p PLLEEQCSIDEPLFE 0.0784677143790593 0.760031763896837 0.552 -0.031 23.5882791734458 1.64626629317639 0.552 -0.031 0.00437695501061323 0.684499871092906 4.6948894509664 -0.428910869504709 Q9P031 CCDC59 Q9P031.S129.p_CCDC59 Q9P031_S129s _1_1_129_129 Q9P031 Q9P031 Thyroid transcription factor 1-associated protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23301.23301.5 26.96 26.96 1.923 3 1 1 0 1195.5679 5893.8602 S129s TMT10 110 (R) KVDHPLSEQVHQPLLEEQCsIDEPLFEDQCSFDQPQPEEQCIK (T) KVDHPLS(0.0)EQVHQPLLEEQCS(0.99)IDEPLFEDQCS(0.0)FDQPQPEEQCIK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CCDC59 28897.5 1 1 4762.1 26.96 HUMAN 1 23.5883 -1.6463 PLLELNDSPVFKTVL-p Q9HAV4;S826-p PLLELNDSPVFKTVL 0.373737854391693 0.00590568792361654 -0.256666666666667 0.517333333333333 7.91682051239307 32.2029911939471 -0.256666666666667 0.517333333333333 0.161554086804183 0.000602144717335742 -1.62072780540781 7.11902818165562 Q9HAV4 XPO5 Q9HAV4.S826.p_XPO5 Q9HAV4_S826s _1_1_826_826 Q9HAV4 Q9HAV4 Exportin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36712.36712.4 18.57 18.57 7.663 2 1 1 0 673.1298 2609.5318 S826s TMT10 811 (K) SAILGLPQPLLELNDsPVFK (T) S(0.0)AILGLPQPLLELNDS(0.99)PVFK K:TMT10,s:Phosphorylated S XPO5 138419.8 3 2 4350.1 33.03 HUMAN 1 -7.9168 32.203 PLLFKSASDTNLQKG-p A0JNW5;S953-p PLLFKSASDTNLQKG 0.291864377986462 0.319554107689661 0.185333333333333 0.171333333333333 10.0875231738111 6.55272929325566 0.185333333333333 0.171333333333333 0.098004875796377 0.221170434266376 1.99692041789664 1.3821128227711 A0JNW5 UHRF1BP1L A0JNW5.S953.p_UHRF1BP1L A0JNW5_S953s _1_1_953_953 A0JNW5 A0JNW5|A0A0C4DGH6 UHRF1-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8267.8267.2 13.64 13.64 1.215 3 1 1 0 751.3846 1421.8 S953s TMT10 951 (K) SAsDTNLQK (G) S(0.0)AS(0.99)DT(0.0)NLQK K:TMT10,s:Phosphorylated S UHRF1BP1L 165621.9 3 9 398.1 328.88 HUMAN 1 10.0875 6.5527 PLLFRKLSNPDIFSS-p Q6P0Q8;S74-p PLLFRKLSNPDIFSS 0.615940974145096 0.223963577558372 -0.0736666666666667 -0.163333333333333 3.90619164958834 8.55789998881561 -0.0736666666666667 -0.163333333333333 0.406799897704351 0.139383062046887 -0.899155075251567 -1.73124222607129 Q6P0Q8 MAST2 Q6P0Q8.S74.p_MAST2 Q6P0Q8_S74s _1_1_74_74 Q6P0Q8 Q6P0Q8|Q6P0Q8-2 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18873.18873.2 14.51 14.51 3.908 4 1 1 0 1081.0978 2081.221 S74s TMT10 72 (R) KLsNPDIFSSTGK (V) KLS(0.99)NPDIFS(0.0)S(0.0)T(0.0)GK K:TMT10,s:Phosphorylated S MAST2 197687.5 5 37 121.1 549.41 HUMAN 1 -3.9062 -8.5579 PLLGSSPTLPTSFGS-p Q9H6Y7;T316-p PLLGSSPTLPTSFGS 0.187254795627764 0.818147012376999 -0.223666666666667 0.0253333333333334 14.283082037955 1.21968112355682 -0.223666666666667 0.0253333333333334 0.037298536901572 0.755147671603507 -2.74504254055892 0.328076915320657 Q9H6Y7 RNF167 Q9H6Y7.T316.p_RNF167 Q9H6Y7_T316t _1_1_316_316 Q9H6Y7 Q9H6Y7|I3L0L6 E3 ubiquitin-protein ligase RNF167 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.38200.38200.3 15.66 15.66 1.126 12 1 1 0 1430.0841 4208.2781 T316t Hydrogen 308 (R) TPLLGSSPtLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV (-) T(0.0)PLLGS(0.0)S(0.0)PT(0.99)LPT(0.0)S(0.0)FGS(0.0)LAPAPLVFPGPS(0.0)T(0.0)DPPLS(0.0)PPS(0.0)S(0.0)PVILV t:Phosphorylated T RNF167 38811.5 13 1 3934.1 40.5 HUMAN 1 -14.2831 1.2197 PLLKGSLSQELSKSF-p Q9H6A9;S246-p PLLKGSLSQELSKSF 0.656769255604447 0.742060172480771 0.072 -0.0326666666666667 3.4266769586091 1.78594699448955 0.072 -0.0326666666666667 0.454289086880522 0.662834798437616 0.805819284905371 -0.460807294034471 Q9H6A9 PCNXL3 Q9H6A9.S246.p_PCNXL3 Q9H6A9_S246s _1_1_246_246 Q9H6A9 Q9H6A9|Q9H6A9-2 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16169.16169.2 12.09 6.87 2.774 3 1 1 0 743.9006 1406.8255 S246s TMT10 243 (K) GSLsQELSK (S) GS(0.0)LS(0.99)QELS(0.0)K K:TMT10,s:Phosphorylated S PCNX3 224430.8 3 9 168.1 492.45 HUMAN 1 3.4267 -1.7859 PLLKNAISLPVIGGP-p O14613;S109-p PLLKNAISLPVIGGP 0.227127566642952 0.0255135823897683 0.334 -0.295666666666667 12.3727218692667 21.6796727995246 0.334 -0.295666666666667 0.0579065662791846 0.00679254806217742 2.398624930618 -4.24465597009254 O14613 CDC42EP2 O14613.S109.p_CDC42EP2 O14613_S109s _1_1_109_109 O14613 O14613 Cdc42 effector protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29723.29723.4 18.78 17.91 3.934 3 1 1 0 811.4656 3162.8767 S109s TMT10 106 (K) NAIsLPVIGGPQALTLPTAQAPPKPPR (L) NAIS(0.99)LPVIGGPQALT(0.0)LPT(0.0)AQAPPKPPR K:TMT10,s:Phosphorylated S CDC42EP2 22540.2 2 1 5493.1 18.78 HUMAN 1 12.3727 -21.6797 PLLKRSHSVPAPSIR-p Q6ZV29-5;S380-p PLLKRSHSVPAPSIR 0.746397699970789 0.191220721367156 0.0463333333333333 0.160666666666667 2.41164660091525 9.44959415041555 0.0463333333333333 0.160666666666667 0.573898830728206 0.113511688775276 0.598150474552747 1.88550750902859 Q6ZV29 PNPLA7 Q6ZV29.5.S380.p_PNPLA7 Q6ZV29-5_S380s _1_1_380_380 Q6ZV29-5 Q6ZV29-5|Q6ZV29-4|Q6ZV29-3|Q6ZV29-2 Isoform 5 of Patatin-like phospholipase domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7905.7905.4 9.49 9.49 2.124 3 1 1 0 429.9947 1636.9899 S380s TMT10 378 (R) SHsVPAPSIRK (Q) S(0.0)HS(0.99)VPAPS(0.0)IRK K:TMT10,s:Phosphorylated S PNPLA7 149712 2 1 6093.1 14.06 HUMAN 1 2.4116 9.4496 PLLKRVQSAEKLAAA-p Q6P0Q8;S1407-p PLLKRVQSAEKLAAA 0.123781235897274 0.303187857957938 0.368 0.255333333333333 18.8634458716037 6.8428598305216 0.368 0.255333333333333 0.012991383789988 0.206877860879702 3.63916733660069 1.43309058446542 Q6P0Q8 MAST2 Q6P0Q8.S1407.p_MAST2 Q6P0Q8_S1407s _1_1_1407_1407 Q6P0Q8 Q6P0Q8 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4263.4263.3 8.11 8.11 99 1 1 1 0 452.5872 1275.7785 S1407s TMT10 1404 (K) RVQsAEK (L) RVQS(1.0)AEK K:TMT10,s:Phosphorylated S MAST2 197687.5 1 62 121.1 549.41 HUMAN 1 18.8634 6.8429 PLLLAARSP______-p Q6P1X6;S215-p PLLLAARSP______ 0.940217288101233 0.0220411156074418 -0.0226666666666667 0.814 0.524934765263717 22.6371567995465 -0.0226666666666667 0.814 0.886148534266517 0.00544859239702876 -0.150064721837839 4.46427351541549 Q6P1X6 C8orf82 Q6P1X6.S215.p_C8orf82 Q6P1X6_S215s _1_1_215_215 Q6P1X6 Q6P1X6|Q6P1X6-2 UPF0598 protein C8orf82 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.37783.37783.3 21.78 21.78 10.708 2 1 1 0 692.3904 1995.1874 S215s TMT10 200 (R) LALTMDLAPLLLAARsP (-) LALT(0.0)MDLAPLLLAARS(0.99)P s:Phosphorylated S C8orf82 24288.3 1 1 5209.1 21.78 HUMAN 1 -0.5249 22.6372 PLLLAPKS_______-p Q96JA1;S1093-p PLLLAPKS_______ 0.637421735269445 0.492913533532559 -0.0946666666666667 -0.119333333333333 3.64815365863846 4.10710042988444 -0.0946666666666667 -0.119333333333333 0.43170257004184 0.388409601380978 -0.849246544673451 -0.937385458617695 Q96JA1 LRIG1 Q96JA1.S1093.p_LRIG1 Q96JA1_S1093s _1_1_1093_1093 Q96JA1 Q96JA1|Q96JA1-2 Leucine-rich repeats and immunoglobulin-like domains protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20332.20332.3 8.63 8.63 99 1 1 1 0 587.3591 1680.0936 S1093s TMT10 1083 (K) QRVPLLLAPKs (-) QRVPLLLAPKS(1.0) K:TMT10,s:Phosphorylated S LRIG1 120765.7 1 3 3587.1 47.66 HUMAN 1 -3.6482 -4.1071 PLLLRRLSVEESGLG-p Q2M3V2;S260-p PLLLRRLSVEESGLG 0.349885635838441 0.142866565520357 0.127333333333333 -0.193333333333333 8.4728051263606 11.1361409930464 0.127333333333333 -0.193333333333333 0.142141039559367 0.0769814169623223 1.71709747852633 -2.17898099096452 Q2M3V2 NotFound Q2M3V2.S260.p_NotFound Q2M3V2_S260s _1_1_260_260 Q2M3V2 Q2M3V2 Ankyrin repeat domain-containing protein SOWAHA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21172.21172.3 15.02 15.02 4.01 2 1 1 0 669.3589 1926.097 S260s TMT10 258 (R) RLsVEESGLGLGLGPGR (S) RLS(0.99)VEES(0.0)GLGLGLGPGR s:Phosphorylated S SOWAHA 57612.8 2 3 2717.1 72.95 HUMAN 1 8.4728 -11.1361 PLLPLAMSARFRLAM-p O60826;S62-p PLLPLAMSARFRLAM 0.196612231479941 0.124868955572841 0.376 -0.207333333333333 13.7638528308275 11.9173601059723 0.376 -0.207333333333333 0.0420353547496644 0.0643078498986187 2.64966294721899 -2.31653861603808 O60826 CCDC22 O60826.S62.p_CCDC22 O60826_S62s _1_1_62_62 O60826 O60826 Coiled-coil domain-containing protein 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.35768.35768.3 15.08 15.08 2.34 3 1 1 0 791.434 2292.3311 S62s TMT10 44 (R) VINPAVGSGLSPLLPLAMsAR (F) VINPAVGS(0.0)GLS(0.0)PLLPLAMS(0.99)AR s:Phosphorylated S CCDC22 71096.6 1 2 3114.1 60.34 HUMAN 1 13.7639 -11.9174 PLLPPGDSEIEEGEI-p Q9H7N4;S389-p PLLPPGDSEIEEGEI 0.180801698912031 0.902281885049034 0.301333333333333 -0.015 14.6500648847912 0.622329289265263 0.301333333333333 -0.015 0.0342762665539609 0.866497015247889 2.81307457028889 -0.176245456773133 Q9H7N4 SCAF1 Q9H7N4.S389.p_SCAF1 Q9H7N4_S389s _1_1_389_389 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.34148.34148.4 18.73 18.73 11.342 3 1 1 0 1054.7817 4136.1488 S389s TMT10 367 (K) VSVEVVTAGGAALPPPLLPPGDsEIEEGEIVQPEEEPR (L) VS(0.0)VEVVT(0.0)AGGAALPPPLLPPGDS(0.99)EIEEGEIVQPEEEPR s:Phosphorylated S SCAF1 139895 1 4 76.1 647.25 HUMAN 1 14.6501 -0.6223 PLLPQHDSPAKKCRL-p Q8TE04;S215-p PLLPQHDSPAKKCRL 0.900356606703368 0.00724308283752726 0.019 -0.805333333333333 0.892157150811378 30.6176846948859 0.019 -0.805333333333333 0.814299718987089 0.000867424192573884 0.246604036595112 -6.6115144001127 Q8TE04 PANK1 Q8TE04.S215.p_PANK1 Q8TE04_S215s _1_1_215_215 Q8TE04 Q8TE04 Pantothenate kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31870.31870.4 22.69 22.69 99 1 1 1 0 718.1547 2789.633 S215s TMT10 198 (R) LPLLPELQPQPLLPQHDsPAK (K) LPLLPELQPQPLLPQHDS(1.0)PAK K:TMT10,s:Phosphorylated S PANK1 65194 4 1 2375.1 86.11 HUMAN 1 0.8922 -30.6177 PLLRRLQSSLQSQRS-p O95696-2;S498-p PLLRRLQSSLQSQRS 0.21657303556267 0.346043849281591 0.687 0.113666666666667 12.8056113367557 6.10772609658076 0.687 0.113666666666667 0.0524129816424971 0.24503458718741 2.47609742121915 1.30341613488409 O95696 BRD1 O95696.2.S498.p_BRD1 O95696-2_S498s _1_1_498_498 O95696-2 O95696-2 Isoform 2 of Bromodomain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6465.6465.3 10.47 10.47 1.133 3 1 1 0 504.6015 1431.8229 S498s TMT10 495 (R) RLQsSLQSQR (S) RLQS(0.99)S(0.0)LQS(0.0)QR s:Phosphorylated S BRD1 135466.1 1 5 1002.1 189.89 HUMAN 1 12.8056 6.1077 PLLSKDQSGSEREDS-p Q9UBY0;S773-p PLLSKDQSGSEREDS 0.512047080261968 0.614794718841381 -0.248 -0.091 5.37527867328828 2.87105928879545 -0.248 -0.091 0.290049507695601 0.51629042538184 -1.17240691673582 -0.6940040277783 Q9UBY0 SLC9A2 Q9UBY0.S773.p_SLC9A2 Q9UBY0_S773sS775s_2_2_773_775 Q9UBY0 Q9UBY0 Sodium/hydrogen exchanger 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23073.23073.5 13.54 8.99 1.115 8 2 2 0 959.0995 4631.5248 S773s S775s TMT10 756 (K) GTQTSGLLQQPLLSKDQsGsEREDSLTEGIPPKPPPR (L) GT(0.0)QT(0.0)S(0.0)GLLQQPLLS(0.0)KDQS(0.99)GS(0.99)EREDS(0.0)LT(0.0)EGIPPKPPPR K:TMT10,s:Phosphorylated S SLC9A2 92088.6 1 15 1290.1 157.7 HUMAN 1 -5.3753 -2.8711 PLLSQEDSEEEENEL-p Q9H1H9-2;S1494-p PLLSQEDSEEEENEL 0.540423822583741 0.409178301461255 0.127333333333333 -0.107666666666667 4.93296811133326 5.16528462058835 0.127333333333333 -0.107666666666667 0.321146496767577 0.304418847859788 1.09175971440795 -1.13402721734784 Q9H1H9 KIF13A Q9H1H9.2.S1494.p_KIF13A Q9H1H9-2_S1494s _1_1_1494_1494 Q9H1H9-2 Q9H1H9-2|Q9H1H9-4|Q9H1H9-3 Isoform 2 of Kinesin-like protein KIF13A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23646.23646.5 22.92 22.92 7.626 2 1 1 0 733.5784 3583.8856 S1494s TMT10 1481 (R) IALEARPLLSQEDsEEEENELEAINRK (L) IALEARPLLS(0.0)QEDS(0.99)EEEENELEAINRK K:TMT10,s:Phosphorylated S KIF13A 200221.2 2 13 1079.2 180.11 HUMAN 1 4.933 -5.1653 PLLSRCVSMPGDISG-p Q8IY17-4;S420-p PLLSRCVSMPGDISG 0.299435467422777 0.0761648630678251 0.155 -0.226 9.84729602363837 14.8399872320044 0.155 -0.226 0.103578686091214 0.0328096257694892 1.9551923726635 -2.84666086703462 Q8IY17 PNPLA6 Q8IY17.4.S420.p_PNPLA6 Q8IY17-4_S420s _1_1_420_420 Q8IY17-4 Q8IY17-4 Isoform 4 of Neuropathy target esterase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19695.19695.3 14.63 14.63 8.165 2 1 1 0 647.3041 1859.9305 S420s TMT10 418 (R) CVsMPGDISGLQGGPR (S) CVS(0.99)MPGDIS(0.0)GLQGGPR C:Carbamidomethylation,s:Phosphorylated S PNPLA6 152434.6 2 2 2719.1 72.93 HUMAN 1 9.8473 -14.84 PLLSVRESLSEEEAQ-p Q9BXP5;S679-p PLLSVRESLSEEEAQ 0.777448579667312 0.104849704441111 -0.0583333333333333 0.191 2.09935919364081 12.9395944651908 -0.0583333333333334 0.191 0.616685987855131 0.0508206895607506 -0.530695119080823 2.49882444958867 Q9BXP5 SRRT Q9BXP5.S679.p_SRRT Q9BXP5_S679s _1_1_679_679 Q9BXP5 Q9BXP5|Q9BXP5-3|Q9BXP5-2|Q9BXP5-4|Q9BXP5-5 Serrate RNA effector molecule homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23590.23590.3 16.07 12.27 2.339 4 1 1 0 856.4647 2487.407 S679s TMT10 670 (K) LTPLLSVREsLSEEEAQK (M) LT(0.0)PLLS(0.0)VRES(0.99)LS(0.0)EEEAQK K:TMT10,s:Phosphorylated S SRRT 101121.1 1 14 321.1 364.45 HUMAN 1 -2.0994 12.9396 PLMEKKNSLKEDHEE-p Q8WUM9;S277-p PLMEKKNSLKEDHEE 0.0360961121648541 0.00130863864856926 -1.45 -0.959 33.0481554795265 46.9104435286398 -1.45 -0.959 0.000495660661384897 2.03683405287321e-05 -7.4158800181658 -13.7233943851327 Q8WUM9 SLC20A1 Q8WUM9.S277.p_SLC20A1 Q8WUM9_S277s _1_1_277_277 Q8WUM9 Q8WUM9 Sodium-dependent phosphate transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6168.6168.5 10.98 10.98 2.65 2 1 1 0 491.6742 2374.3748 S277s TMT10 275 (K) KNsLKEDHEETK (L) KNS(0.99)LKEDHEET(0.0)K K:TMT10,s:Phosphorylated S SLC20A1 74440.1 4 3 2551.1 78.92 HUMAN 1 -33.0482 -46.9104 PLMERQESVELTVQQ-p P98174;S365-p PLMERQESVELTVQQ 0.42925899542491 0.594156874075266 0.172333333333333 0.146 6.76375479783151 3.0602177725511 0.172333333333333 0.146 0.210680587240047 0.494285900901601 1.41959301385386 0.73251288846193 P98174 FGD1 P98174.S365.p_FGD1 P98174_S365s _1_1_365_365 P98174 P98174 FYVE, RhoGEF and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14709.14709.2 14.86 14.86 4.474 2 1 1 0 913.9878 1747.0002 S365s TMT10 363 (R) QEsVELTVQQK (V) QES(0.99)VELT(0.0)VQQK K:TMT10,s:Phosphorylated S FGD1 107757.1 3 6 1189.1 168.38 HUMAN 1 6.7638 3.0602 PLMKRAFSTEK____-p Q9NZ32;S414-p PLMKRAFSTEK____ 0.0628764257048439 0.34186172518305 -0.450666666666667 -0.133 26.1009923126708 6.17382555394777 -0.450666666666667 -0.133 0.00245414810715478 0.241333407311169 -5.32813853477796 -1.31514924634957 Q9NZ32 ACTR10 Q9NZ32.S414.p_ACTR10 Q9NZ32_S414s _1_1_414_414 Q9NZ32 Q9NZ32 Actin-related protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7318.7318.3 7.72 7.72 1.173 2 1 1 0 459.5831 1296.7676 S414s TMT10 411 (K) RAFsTEK (-) RAFS(0.99)T(0.0)EK K:TMT10,s:Phosphorylated S ACTR10 46876.7 1 2 4871.1 25.61 HUMAN 1 -26.101 -6.1738 PLMRVVQSIKHTKRK-p O94806;S406-p PLMRVVQSIKHTKRK 0.219627536199096 0.16876812380264 0.333 -0.145666666666667 12.6788322372759 10.1631279904538 0.333 -0.145666666666667 0.0539655709577089 0.0963135079156688 2.45335205563849 -2.0092386563996 O94806 PRKD3 O94806.S406.p_PRKD3 O94806_S406s _1_1_406_406 O94806 O94806|O94806-2 Serine/threonine-protein kinase D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9642.9642.4 11.04 11.04 5.561 2 1 1 0 452.526 1727.1147 S406s TMT10 403 (R) VVQsIKHTK (R) VVQS(0.99)IKHT(0.0)K K:TMT10,s:Phosphorylated S PRKD3 101838.2 2 14 1565.1 131.21 HUMAN 1 12.6788 -10.1631 PLNAFKESKGMMNDE-p Q08722;S316-p PLNAFKESKGMMNDE 0.0930004911854097 0.624349459225092 -0.385666666666667 -0.059 21.9341477171285 2.78218592473867 -0.385666666666667 -0.059 0.00640597483533541 0.526964558764163 -4.30688678977168 -0.675722636359459 Q08722 CD47 Q08722.S316.p_CD47 Q08722_S316s _1_1_316_316 Q08722 Q08722 Leukocyte surface antigen CD47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19795.19795.4 13.35 13.02 99 1 1 1 0 558.06 2149.2472 S316s TMT10 305 (K) AVEEPLNAFKEsK (G) AVEEPLNAFKES(1.0)K K:TMT10,s:Phosphorylated S CD47 35612.4 2 1 6186.1 13.35 HUMAN 1 -21.9341 -2.7822 PLNHRQLSLSSSRSS-p Q9UGP4;S233-p PLNHRQLSLSSSRSS 0.914687993198443 0.00799083510313379 0.0226666666666667 -0.441333333333333 0.759256292750933 29.9015719751915 0.0226666666666667 -0.441333333333333 0.839603752088963 0.00102292266749509 0.212350152948454 -6.39214421992201 Q9UGP4 LIMD1 Q9UGP4.S233.p_LIMD1 Q9UGP4_S233s _1_1_233_233 Q9UGP4 Q9UGP4|C9JRJ5 LIM domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9994.9994.2 12.17 12.17 2.145 4 1 1 0 593.805 1106.6367 S233s TMT10 231 (R) QLsLSSSR (S) QLS(0.99)LS(0.0)S(0.0)S(0.0)R s:Phosphorylated S LIMD1 73900.6 2 2 1009.1 188.97 HUMAN 1 0.7593 -29.9016 PLNLSSVTP______-p Q9UJX2;T596-p PLNLSSVTP______ 0.629635337968447 0.00947145523994574 -0.0673333333333333 -0.554 3.7355518619309 28.5684106928615 -0.0673333333333334 -0.554 0.423101742379013 0.00139046137953621 -0.866230090776647 -5.99919409910873 Q9UJX2 CDC23 Q9UJX2.T596.p_CDC23 Q9UJX2_T596t _1_1_596_596 Q9UJX2 Q9UJX2|Q9UJX2-3 Cell division cycle protein 23 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20085.20123.2 15.76 15.76 4.351 4 1 1 0 789.9274 1498.8791 T596t TMT10 586 (R) RVSPLNLSSVtP (-) RVS(0.0)PLNLS(0.0)S(0.0)VT(0.99)P t:Phosphorylated T CDC23 69631.7 4 7 2341.1 87.22 HUMAN 1 -3.7356 -28.5684 PLNVQFNSPLPGDAV-p O75369-8;S886-p PLNVQFNSPLPGDAV 0.148266672319898 0.00899132100343272 -0.33 0.663333333333333 16.7711381567334 28.9709699787487 -0.33 0.663333333333333 0.0210322717421519 0.00126736877267579 -3.217693386871 6.11578790195813 O75369 FLNB O75369.8.S886.p_FLNB O75369-8_S886s_1_1_886_886 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26134.26134.4 17.01 17.01 5.786 1 1 1 0 577.3168 2225.2694 N885n S886s TMT10 878 (K) APLNVQFnsPLPGDAVK (D) APLN(0.0)VQFN(0.99)S(1.0)PLPGDAVK K:TMT10,n:Deamidated,s:Phosphorylated S FLNB 283797.6 1 16 67.1 680.07 HUMAN 1 -16.7711 28.971 PLNYPPGSPDLGRHY-p Q08174-2;S962-p PLNYPPGSPDLGRHY 0.726935837841591 0.476000704298973 0.0483333333333333 -0.0686666666666667 2.62629600817376 4.29987878038195 0.0483333333333333 -0.0686666666666667 0.546223523222068 0.371545599476946 0.643430112166924 -0.973860832863683 Q08174 PCDH1 Q08174.2.S962.p_PCDH1 Q08174-2_S962s _1_1_962_962 Q08174-2 Q08174-2 Isoform 2 of Protocadherin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23374.23998.3 24.22 24.22 6.731 2 1 1 0 685.6936 1975.0963 S962s TMT10 952 (R) IHLPLNYPPGsPDLGR (H) IHLPLNY(0.0)PPGS(0.99)PDLGR s:Phosphorylated S PCDH1 134290.1 9 3 666.1 249.91 HUMAN 1 2.6263 -4.2999 PLPCDEESPEAELHN-p P23497-4;S274-p PLPCDEESPEAELHN 0.603140826850623 0.124140904022549 0.0743333333333333 0.174 4.05501205547438 11.9547044140915 0.0743333333333333 0.174 0.393096153719947 0.0637572473487151 0.927630699415258 2.32314898240642 P23497 SP100 P23497.4.S274.p_SP100 P23497-4_S274s_1_1_274_274 P23497-4 P23497-4|P23497-3|P23497-2|P23497-5|E9PHV6|P23497-6|P23497-7 Isoform Sp100-C of Nuclear autoantigen Sp-100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19864.19864.4 9.55 9.55 4.516 3 1 1 0 954.6687 3734.6869 S274s N281n TMT10 263 (R) EMPCPLPCDEEsPEAELHnHGIQINSCSVR (L) EMPCPLPCDEES(0.99)PEAELHN(0.99)HGIQIN(0.0)S(0.0)CS(0.0)VR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated SP100 103285 2 7 542.1 276.37 HUMAN 1 4.055 11.9547 PLPDAGASPAPSRCC-p O15297;S85-p PLPDAGASPAPSRCC 0.408887654027387 0.0710915117358706 0.131666666666667 -0.226666666666667 7.16433955557687 15.264782223133 0.131666666666667 -0.226666666666667 0.192117109769157 0.029752384484031 1.48975043470605 -2.92630937187154 O15297 PPM1D O15297.S85.p_PPM1D O15297_S85s _1_1_85_85 O15297 O15297|O15297-2 Protein phosphatase 1D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9412.9412.3 14.61 14.61 1.924 2 1 1 0 672.663 1936.0086 S85s TMT10 74 (R) EARDPLPDAGAsPAPSR (C) EARDPLPDAGAS(0.99)PAPS(0.0)R s:Phosphorylated S PPM1D 67415.7 1 2 2190.1 93.98 HUMAN 1 7.1643 -15.2648 PLPEREETGDEEDGS-p P79522-2;T26-p PLPEREETGDEEDGS 0.457371056507956 0.273971534600652 0.099 -0.125666666666667 6.26085049319172 7.40778971044368 0.099 -0.125666666666667 0.236545641700124 0.181643988280961 1.3309018510027 -1.53177438285958 P79522 PRR3 P79522.2.T26.p_PRR3 P79522-2_T26tS33s_2_2_26_33 P79522-2 P79522-2 Isoform 2 of Proline-rich protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8572.8572.5 20.35 17.69 7.861 3 2 2 0 903.6306 4354.1965 T26t S33s TMT10 6 (K) KQNHHQPPTQQQPPLPEREEtGDEEDGsPIALHR (G) KQNHHQPPT(0.0)QQQPPLPEREET(0.99)GDEEDGS(0.99)PIALHR K:TMT10,t:Phosphorylated T,s:Phosphorylated S PRR3 18872 1 2 3823.1 42.44 HUMAN 1 6.2609 -7.4078 PLPFRSPSPLVSLQA-p Q9UPZ3;S534-p PLPFRSPSPLVSLQA 0.823880329991928 0.857413617353939 -0.0546666666666667 0.0333333333333333 1.62226962060515 0.94167725877845 -0.0546666666666667 0.0333333333333333 0.688292501050597 0.805067461598051 -0.423425134210344 0.259158782793983 Q9UPZ3 HPS5 Q9UPZ3.S534.p_HPS5 Q9UPZ3_S534s _1_1_534_534 Q9UPZ3 Q9UPZ3|Q9UPZ3-2 Hermansky-Pudlak syndrome 5 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23836.23836.3 12.73 12.73 1.131 3 1 1 0 588.6737 1684.0409 S534s TMT10 532 (R) SPsPLVSLQAVK (E) S(0.0)PS(0.99)PLVS(0.0)LQAVK K:TMT10,s:Phosphorylated S HPS5 129386.8 6 2 2159.1 95.05 HUMAN 1 -1.6223 0.9417 PLPGFEDSPDQRRLP-p Q8WUA4;S63-p PLPGFEDSPDQRRLP 0.498143427920421 0.188277658963683 0.09 0.140333333333333 5.5766288733739 9.53832106853607 0.09 0.140333333333333 0.276909026396565 0.111216159279642 1.20875774841527 1.90087110590973 Q8WUA4 GTF3C2 Q8WUA4.S63.p_GTF3C2 Q8WUA4_S63s _1_1_63_63 Q8WUA4 Q8WUA4|Q8WUA4-2|A0A087WZD8 General transcription factor 3C polypeptide 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30614.30836.4 22.07 22.07 1.737 9 1 1 0 877.1457 3425.5926 S63s TMT10 38 (K) TSSEMTSAEASVEMSLPTPLPGFEDsPDQR (R) T(0.0)S(0.0)S(0.0)EMT(0.0)S(0.0)AEAS(0.0)VEMS(0.0)LPT(0.0)PLPGFEDS(0.99)PDQR s:Phosphorylated S GTF3C2 101761.7 6 2 753.1 231.45 HUMAN 1 5.5766 9.5383 PLPGGLPSPEDAMVT-p Q9Y4I5;S12-p PLPGGLPSPEDAMVT 0.233628206047255 0.00260393841721574 -0.240333333333333 0.819333333333333 12.1244923106664 39.3612728319388 -0.240333333333333 0.819333333333333 0.061312746243169 0.000115843779100405 -2.35443567575992 9.84774688644607 Q9Y4I5 MTL5 Q9Y4I5.S12.p_MTL5 Q9Y4I5_S12s_1_1_12_12 Q9Y4I5 Q9Y4I5|Q9Y4I5-2|Q9Y4I5-3 Tesmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37750.37750.4 25.74 25.74 1.172 4 1 1 0 1019.7381 3979.9758 M1m S12s Acetyl 1 (-) mEEGPLPGGLPsPEDAMVTELLSPEGPFASENIGLK (A) M(0.99)EEGPLPGGLPS(0.99)PEDAM(0.0)VT(0.0)ELLS(0.0)PEGPFAS(0.0)ENIGLK K:TMT10,m:Oxidized methionine,s:Phosphorylated S TESMIN 56792.6 10 1 4863.1 25.74 HUMAN 1 -12.1245 39.3613 PLPIVVASPRGPLRK-p P82675;S386-p PLPIVVASPRGPLRK 0.85535946170135 0.10916931689059 -0.0263333333333333 0.194666666666667 1.31874381418263 12.7086352521228 -0.0263333333333333 0.194666666666667 0.738117697934529 0.0535965055290813 -0.352025684128596 2.4573824226135 P82675 MRPS5 P82675.S386.p_MRPS5 P82675_S386s _1_1_386_386 P82675 P82675 28S ribosomal protein S5, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23915.23915.4 15.94 15.94 99 1 1 1 0 684.8677 2656.4806 S386s TMT10 367 (K) GLHVVEIREECGPLPIVVAsPR (G) GLHVVEIREECGPLPIVVAS(1.0)PR C:Carbamidomethylation,s:Phosphorylated S MRPS5 48519.1 2 1 5834.1 15.94 HUMAN 1 -1.3187 12.7086 PLPKYASSPKPNNSY-p Q86VQ1;S406-p PLPKYASSPKPNNSY 0.210091893809486 0.728513091319524 -0.322333333333333 -0.0543333333333333 13.0740963498592 1.89409297164362 -0.322333333333333 -0.0543333333333332 0.0492708852159729 0.646533008963704 -2.52442730137867 -0.485163049537998 Q86VQ1 GLCCI1 Q86VQ1.S406.p_GLCCI1 Q86VQ1_S406s _1_1_406_406 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16499.16499.2 10.82 10.82 1.117 5 1 1 0 1201.1162 2321.2567 S406s TMT10 403 (K) YASsPKPNNSYMFK (R) Y(0.0)AS(0.0)S(0.99)PKPNNS(0.0)Y(0.0)MFK K:TMT10,s:Phosphorylated S GLCCI1 58707.2 14 15 307.1 373.49 HUMAN 1 -13.0741 -1.8941 PLPPGKRSINKLDSP-p P42566;S790-p PLPPGKRSINKLDSP 0.153159090763807 0.0368476744802948 -0.571333333333333 -0.276333333333333 16.3862141346414 19.2823866156343 -0.571333333333333 -0.276333333333333 0.0229815113720992 0.011796721821428 -3.14270313680743 -3.72328163880819 P42566 EPS15 P42566.S790.p_EPS15 P42566_S790s _1_1_790_790 P42566 P42566|B1AUU8|P42566-2 Epidermal growth factor receptor substrate 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20559.20559.3 14.18 6.71 3.484 2 1 1 0 710.0587 2048.1995 S790s TMT10 790 (R) sINKLDSPDPFK (L) S(0.99)INKLDS(0.0)PDPFK K:TMT10,s:Phosphorylated S EPS15 99281.5 3 14 342.1 353.17 HUMAN 1 -16.3862 -19.2824 PLPPIDHSEIDYPPF-p Q86XP3;S206-p PLPPIDHSEIDYPPF 0.164162708749184 0.0528443794833587 0.34 -0.259666666666667 15.7208177129629 17.0354264296619 0.34 -0.259666666666667 0.0267866392411253 0.0197905269037723 3.01476603695118 -3.26711960190189 Q86XP3 DDX42 Q86XP3.S206.p_DDX42 Q86XP3_S206s _1_1_206_206 Q86XP3 Q86XP3|Q86XP3-2|A0A0A0MSJ0 ATP-dependent RNA helicase DDX42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.32039.32039.4 20.26 20.26 4.91 2 1 1 0 719.1254 2793.5115 S206s TMT10 196 (K) IIDPLPPIDHsEIDYPPFEK (N) IIDPLPPIDHS(0.99)EIDY(0.0)PPFEK K:TMT10,s:Phosphorylated S DDX42 103258.6 1 4 914.1 200.89 HUMAN 1 15.7208 -17.0354 PLPPILGSPTKAVPS-p O75385;S623-p PLPPILGSPTKAVPS 0.0802188320632121 0.00430383606637292 -0.35 -0.643333333333333 23.4052919702133 34.7804143424225 -0.35 -0.643333333333333 0.00456531557181178 0.000332627817134327 -4.65089708992878 -8.01372507852284 O75385 ULK1 O75385.S623.p_ULK1 O75385_S623s _1_1_623_623 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25172.25172.2 17.65 15.32 1.478 2 1 1 0 886.5098 1692.046 S623s TMT10 615 (R) NPLPPILGsPTK (A) NPLPPILGS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S ULK1 113656.3 9 14 351.1 351.01 HUMAN 1 -23.4053 -34.7804 PLPPRKGSPSSSKIS-p O00750;S177-p PLPPRKGSPSSSKIS 0.544463415002689 0.150945638149214 -0.0893333333333333 -0.403 4.87572727174986 10.800599474432 -0.0893333333333333 -0.403 0.325407286065339 0.0831648967271814 -1.08123450408719 -2.12027554969179 O00750 PIK3C2B O00750.S177.p_PIK3C2B O00750_S177s _1_1_177_177 O00750 O00750|F5GWN5 Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18948.19156.4 13.36 13.36 1.284 6 1 1 0 719.6482 2795.6023 S177s TMT10 163 (R) ASIWDTPPLPPRKGsPSSSK (I) AS(0.0)IWDT(0.0)PPLPPRKGS(0.99)PS(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S PIK3C2B 186932.5 4 4 1730.1 119.12 HUMAN 1 -4.8757 -10.8006 PLPPSAPSPTREGAL-p Q8N1G0;S183-p PLPPSAPSPTREGAL 0.982084938755332 0.0553553002918158 0.00466666666666666 0.298333333333333 0.156346517692673 16.7459190202521 0.00466666666666665 0.298333333333333 0.964640181490255 0.0211547597727639 0.0464204494746711 3.2103568237159 Q8N1G0 ZNF687 Q8N1G0.S183.p_ZNF687 Q8N1G0_S183s _1_1_183_183 Q8N1G0 Q8N1G0|Q8N1G0-2|F8WCX2 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28489.28489.5 27.59 27.59 1.191 5 1 1 0 673.1279 3281.6429 S183s TMT10 158 (K) TPLDLFAHFGPEPGDHSDPLPPSAPsPTR (E) T(0.0)PLDLFAHFGPEPGDHS(0.0)DPLPPS(0.0)APS(0.99)PT(0.0)R s:Phosphorylated S ZNF687 131979.7 3 2 156.1 501.88 HUMAN 1 0.1563 16.7459 PLPQVDESPVNDSHG-p Q6NUJ5;S60-p PLPQVDESPVNDSHG 0.422807784151987 0.368025455316781 0.110666666666667 0.0873333333333333 6.88568387324343 5.75608425261974 0.110666666666667 0.0873333333333333 0.204847945534679 0.265700012436453 1.44098756774346 1.24070351195258 Q6NUJ5 PWWP2B Q6NUJ5.S60.p_PWWP2B Q6NUJ5_S60s _1_1_60_60 Q6NUJ5 Q6NUJ5|Q6NUJ5-2 PWWP domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.32404.32404.4 23.6 23.6 6.812 3 1 1 0 752.8839 2928.5417 S60s TMT10 43 (K) SGLFGLPPLAPLPQVDEsPVNDSHGR (A) S(0.0)GLFGLPPLAPLPQVDES(0.99)PVNDS(0.0)HGR s:Phosphorylated S PWWP2B 64650.6 3 1 2283.1 89.78 HUMAN 1 6.8857 5.7561 PLPRFVASKNEQESR-p Q96D71;S104-p PLPRFVASKNEQESR 0.0431670381948327 0.00360325086150036 0.482333333333333 0.919333333333333 30.246581305011 36.3736733077625 0.482333333333333 0.919333333333333 0.000944804318110601 0.000230479694291317 6.50749869037835 8.61392924264857 Q96D71 REPS1 Q96D71.S104.p_REPS1 Q96D71_S104s _1_1_104_104 Q96D71 Q96D71|Q96D71-3|Q96D71-4|E9PMG1|Q96D71-2|F2Z3L2 RalBP1-associated Eps domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9085.9085.2 11.3 7.15 3.491 2 1 1 0 916.9698 1752.9645 S104s TMT10 101 (R) FVAsKNEQESR (H) FVAS(0.99)KNEQES(0.0)R K:TMT10,s:Phosphorylated S REPS1 86831.7 3 17 226.1 425.21 HUMAN 1 30.2466 36.3737 PLPRQQVTEIIFVLK-p A0A286YFF8;T1641-p PLPRQQVTEIIFVLK 0.566691167495734 0.0533323245684845 -0.113 -0.235666666666667 4.54325688901004 16.9772090167033 -0.113 -0.235666666666667 0.351296894902059 0.0200576061061798 -1.01965017079324 -3.25567064007579 A0A286YFF8 NotFound A0A286YFF8.T1641.p_NotFound A0A286YFF8_T1641tS1651sS1656s_3_3_1641_1656 A0A286YFF8 A0A286YFF8|Q7Z3U7 Protein MON2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17596.17596.4 7.9 7.9 7.901 4 3 3 0 917.4837 3427.0162 T1641t S1651s S1656s Hydrogen 1633 (K) CPLPRQQVtEIIFVLKAVsTLIDsLK (K) CPLPRQQVT(0.99)EIIFVLKAVS(0.99)T(0.0)LIDS(0.99)LK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S MON2 192594.7 1 6 1105.1 176.81 HUMAN 1 -4.5433 -16.9772 PLPSCPGSPPLPDDL-p O94864;S108-p PLPSCPGSPPLPDDL 0.402062735734531 0.0566781042660022 -0.137666666666667 0.302333333333333 7.30157036342331 16.6128288580769 -0.137666666666667 0.302333333333333 0.186141394714647 0.0218130861296556 -1.51370507560477 3.18440460103558 O94864 SUPT7L O94864.S108.p_SUPT7L O94864_S108s _1_1_108_108 O94864 O94864|O94864-2 STAGA complex 65 subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31444.31444.4 20.03 20.03 1.752 4 1 1 0 1110.5469 4359.2041 S108s TMT10 96 (K) TEESEPLPSCPGsPPLPDDLLPLDCKNPNAPFQIR (H) T(0.0)EES(0.0)EPLPS(0.0)CPGS(0.99)PPLPDDLLPLDCKNPNAPFQIR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SUPT7L 46591.3 6 1 2385.1 85.6 HUMAN 1 -7.3016 16.6128 PLPSGLLTPPQSGKK-p P24864;T395-p PLPSGLLTPPQSGKK 0.0683636000573323 0.00375955051406218 -0.406 -0.679666666666667 25.1571783146357 35.9662125567228 -0.406 -0.679666666666667 0.00304987590246395 0.000253150473667344 -5.08369567931434 -8.45680301235823 P24864 CCNE1 P24864.T395.p_CCNE1 P24864_T395t _1_1_395_395 P24864 P24864|P24864-3|P24864-2|C9J2U0 G1/S-specific cyclin-E1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21324.21324.4 11.58 11.58 3.762 4 1 1 0 612.1088 2365.4422 T395t TMT10 386 (R) ASPLPSGLLtPPQSGKK (Q) AS(0.0)PLPS(0.0)GLLT(0.99)PPQS(0.0)GKK K:TMT10,t:Phosphorylated T CCNE1 47646.9 1 4 1915.1 107.57 HUMAN 1 -25.1572 -35.9662 PLPTIIGSPTKTTAP-p Q8IYT8;S600-p PLPTIIGSPTKTTAP 0.0608497647854506 0.00671367697232148 -0.570666666666667 -0.491666666666667 26.5993939278027 31.2097134930053 -0.570666666666667 -0.491666666666667 0.00218806695456596 0.000756882825443736 -5.46059649545639 -6.79744324396876 Q8IYT8 ULK2 Q8IYT8.S600.p_ULK2 Q8IYT8_S600s _1_1_600_600 Q8IYT8 Q8IYT8 Serine/threonine-protein kinase ULK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24026.24026.3 14.16 14.16 1.31 4 1 1 0 588.3426 1683.0457 S600s TMT10 592 (K) TPLPTIIGsPTK (T) T(0.0)PLPT(0.0)IIGS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S ULK2 114346.8 1 5 1902.1 108.29 HUMAN 1 -26.5994 -31.2097 PLPTKRGTAGLLEQW-p Q96FZ2;T330-p PLPTKRGTAGLLEQW 0.588501354919735 0.00637061118587803 -0.209666666666667 -0.554666666666667 4.24142591689754 31.6074686995325 -0.209666666666667 -0.554666666666667 0.376580136316399 0.000690642229772869 -0.96300613776062 -6.92474749242896 Q96FZ2 HMCES Q96FZ2.T330.p_HMCES Q96FZ2_T330t _1_1_330_330 Q96FZ2 Q96FZ2|E7EMP6 Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26404.26404.3 19.29 19.29 99 1 1 1 0 637.36 1830.1002 T330t TMT10 328 (K) RGtAGLLEQWLK (R) RGT(1.0)AGLLEQWLK K:TMT10,t:Phosphorylated T HMCES 41144.7 1 5 1621.1 126.89 HUMAN 1 -4.2414 -31.6075 PLQEGPKSFDGNTLL-p Q05209;S449-p PLQEGPKSFDGNTLL 0.419709735831736 0.0340592353542532 -0.112 -0.266333333333333 6.95803760260426 19.780571029609 -0.112 -0.266333333333333 0.20146343742904 0.0105182356631235 -1.45366589992908 -3.82848359933165 Q05209 PTPN12 Q05209.S449.p_PTPN12 Q05209_S449s _1_1_449_449 Q05209 Q05209|Q05209-3|Q05209-2 Tyrosine-protein phosphatase non-receptor type 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17434.17434.2 12.91 12.91 4.438 2 1 1 0 723.3539 1365.7324 S449s TMT10 449 (K) sFDGNTLLNR (G) S(0.99)FDGNT(0.0)LLNR s:Phosphorylated S PTPN12 88960.6 5 5 644.1 254.82 HUMAN 1 -6.958 -19.7806 PLQNEKSSPGEIVEE-p Q86UW6;S751-p PLQNEKSSPGEIVEE 0.24333175644278 0.0158314452330284 -0.301666666666667 0.466 11.7377075442104 24.8842381214217 -0.301666666666667 0.466 0.0670238306342656 0.00324770211292386 -2.28589579616274 5.0083041766576 Q86UW6 N4BP2 Q86UW6.S751.p_N4BP2 Q86UW6_S751s _1_1_751_751 Q86UW6 Q86UW6|Q86UW6-2 NEDD4-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11587.11587.2 10.61 4.23 1.374 2 1 1 0 706.338 1331.7004 S751s TMT10 750 (K) SsPGEIVEER (A) S(0.0)S(0.99)PGEIVEER s:Phosphorylated S N4BP2 200566.4 1 5 1216.1 165.62 HUMAN 1 -11.7377 24.8842 PLQPGRMSPSQFARV-p Q86TB9-4;S248-p PLQPGRMSPSQFARV 0.717442807672643 0.714460681798457 0.055 0.0373333333333334 2.72100853516966 2.00954238840817 0.055 0.0373333333333334 0.534440235240402 0.629572516765576 0.663153061222369 0.510854818340792 Q86TB9 PATL1 Q86TB9.4.S248.p_PATL1 Q86TB9-4_S248s _1_1_248_248 Q86TB9-4 Q86TB9-4 Isoform 4 of Protein PAT1 homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22877.22877.3 13.21 13.21 1.513 4 1 1 0 966.4699 2817.416 S248s TMT10 232 (R) MSPNQLCSVPLQPGRMsPSQFAR (V) MS(0.0)PNQLCS(0.0)VPLQPGRMS(0.99)PS(0.0)QFAR C:Carbamidomethylation,s:Phosphorylated S PATL1 80249 2 6 1540.1 133.07 HUMAN 1 2.721 2.0095 PLQPIPASPPPQIPP-p O15446-2;S138-p PLQPIPASPPPQIPP 0.540568630290251 0.0233786008107756 -0.0893333333333333 -0.311 4.93092240565054 22.255917475746 -0.0893333333333333 -0.311 0.32129780561338 0.00594851077269476 -1.09138393021806 -4.37600068515882 O15446 CD3EAP O15446.2.S138.p_CD3EAP O15446-2_S138s _1_1_138_138 O15446-2 O15446-2 Isoform 2 of DNA-directed RNA polymerase I subunit RPA34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28348.28348.3 21.62 17.35 3.252 4 1 1 0 1211.9905 3554.0056 S138s TMT10 119 (R) ILEGPQQSLSGSPLQPIPAsPPPQIPPGLRPR (F) ILEGPQQS(0.0)LS(0.0)GS(0.0)PLQPIPAS(0.99)PPPQIPPGLRPR s:Phosphorylated S CD3EAP 55456.1 4 3 1198.1 167.21 HUMAN 1 -4.9309 -22.2559 PLQRIRLSDGSLKLY-p Q8WUA4;S597-p PLQRIRLSDGSLKLY 0.909465039529785 0.327079353946646 -0.0263333333333333 -0.094 0.809023411599605 6.42612584999568 -0.0263333333333334 -0.094 0.830037395204432 0.227712785058614 -0.225263169713201 -1.35979092361887 Q8WUA4 GTF3C2 Q8WUA4.S597.p_GTF3C2 Q8WUA4_S597s _1_1_597_597 Q8WUA4 Q8WUA4 General transcription factor 3C polypeptide 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16333.16333.3 8.44 1.93 2.459 2 1 1 0 509.6289 1446.9044 S597s TMT10 594 (R) IRLsDGSLK (L) IRLS(0.99)DGS(0.0)LK K:TMT10,s:Phosphorylated S GTF3C2 101761.7 1 7 753.1 231.45 HUMAN 1 -0.809 -6.4261 PLQRQPSSPGPTPRN-p Q13424;S201-p PLQRQPSSPGPTPRN 0.259024801171766 0.125712138011132 0.173 0.238 11.1490758054494 11.8772670800216 0.173 0.238 0.07675248040713 0.0649042733432977 2.18224697077927 2.30944547815135 Q13424 SNTA1 Q13424.S201.p_SNTA1 Q13424_S200sS201s_2_2_200_201 Q13424 Q13424|Q13424-2 Alpha-1-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18003.18003.3 9.82 9.82 1.491 9 2 2 0 1136.5242 3247.6293 S200s S201s TMT10 178 (K) NSTGGTSVGWDSPPASPLQRQPssPGPTPR (N) NS(0.0)T(0.0)GGT(0.0)S(0.0)VGWDS(0.0)PPAS(0.0)PLQRQPS(0.99)S(0.99)PGPT(0.0)PR s:Phosphorylated S SNTA1 54236.6 1 5 4013.1 39.08 HUMAN 1 11.1491 11.8773 PLQSPRNSGSFPSPS-p Q9ULD2;S1259-p PLQSPRNSGSFPSPS 0.189867960204676 0.668822972196221 0.415333333333333 0.058 14.1161943034442 2.38971888932576 0.415333333333333 0.058 0.0387597145207735 0.576803797612147 2.71427699458719 0.593403138397837 Q9ULD2 MTUS1 Q9ULD2.S1259.p_MTUS1 Q9ULD2_S1255sS1259s_2_2_1255_1259 Q9ULD2 Q9ULD2|Q9ULD2-2|Q9ULD2-6|Q9ULD2-3|Q9ULD2-7|Q9ULD2-4 Microtubule-associated tumor suppressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17952.17952.4 9.19 9.19 1.123 10 2 2 0 800.8922 3039.6173 S1255s N1258n S1259s TMT10 1244 (K) RSPTSSAIPLQsPRnsGSFPSPSISPR (-) RS(0.0)PT(0.0)S(0.0)S(0.0)AIPLQS(0.99)PRN(1.0)S(0.99)GS(0.0)FPS(0.0)PS(0.0)IS(0.0)PR s:Phosphorylated S,n:Deamidated MTUS1 142763.7 2 17 645.1 254.81 HUMAN 1 14.1162 2.3897 PLRARKWSNSQPADL-p Q9BRG2;S145-p PLRARKWSNSQPADL 0.0946777628850844 0.241482413517384 -0.322333333333333 -0.160333333333333 21.7857502765578 8.12931736065412 -0.322333333333333 -0.160333333333333 0.0066286482286786 0.153839643186322 -4.27310707121979 -1.65705234650856 Q9BRG2 SH2D3A Q9BRG2.S145.p_SH2D3A Q9BRG2_S145s_1_1_145_145 Q9BRG2 Q9BRG2|Q9BRG2-2 SH2 domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14387.14387.3 12.03 9.13 1.217 2 1 1 0 746.3701 2156.1435 S145s N146n TMT10 143 (R) KWsnSQPADLAHMGR (S) KWS(0.99)N(1.0)S(0.0)QPADLAHMGR K:TMT10,s:Phosphorylated S,n:Deamidated SH2D3A 63662.5 3 3 1551.1 132.49 HUMAN 1 -21.7858 -8.1293 PLREKFGSFLCHKDN-p Q5VUA4;S472-p PLREKFGSFLCHKDN 0.614617666332898 0.00385233994224125 0.169666666666667 -0.668 3.92350811983343 35.7073707950656 0.169666666666667 -0.668 0.405181108278367 0.000268697063681232 0.902479613317173 -8.35830169565381 Q5VUA4 ZNF318 Q5VUA4.S472.p_ZNF318 Q5VUA4_S472s _1_1_472_472 Q5VUA4 Q5VUA4|Q5VUA4-2 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21578.21578.3 10.85 10.85 99 1 1 1 0 511.9289 1453.8026 S472s TMT10 470 (K) FGsFLCHK (D) FGS(1.0)FLCHK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF318 252762.4 1 12 37.1 870.88 HUMAN 1 3.9235 -35.7074 PLRESLPSEDDSDQR-p Q86YV5;S234-p PLRESLPSEDDSDQR 0.499793207479044 0.491219489435274 -0.0986666666666667 -0.067 5.55186555801845 4.12561930834809 -0.0986666666666667 -0.067 0.278492461773963 0.386756898773397 -1.20429820033694 -0.940903890747705 Q86YV5 SGK223 Q86YV5.S234.p_SGK223 Q86YV5_S231sS234s_2_2_231_234 Q86YV5 Q86YV5 Tyrosine-protein kinase PRAG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19567.19567.4 11.89 11.89 2.283 6 2 2 0 912.1519 3485.6553 S231s S234s TMT10 211 (K) LAAFAGTTSGCHQGPGPLREsLPsEDDSDQR (C) LAAFAGT(0.0)T(0.0)S(0.0)GCHQGPGPLRES(0.99)LPS(0.99)EDDS(0.0)DQR C:Carbamidomethylation,s:Phosphorylated S PRAG1 152359.5 1 23 223.1 426.19 HUMAN 1 -5.5519 -4.1256 PLRHRSSSEITLSEC-p O60292;S172-p PLRHRSSSEITLSEC 0.114016248333261 0.81186769038997 0.571 -0.0263333333333333 19.6629577610812 1.26877817223097 0.571 -0.0263333333333333 0.0108069769181897 0.746658791041157 3.80698792897155 -0.339968294673311 O60292 SIPA1L3 O60292.S172.p_SIPA1L3 O60292_S172s _1_1_172_172 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14641.14641.2 17.76 16.04 1.142 5 1 1 0 1181.5026 2282.0292 S172s TMT10 170 (R) SSsEITLSECDAEDAGEPR (G) S(0.0)S(0.0)S(0.99)EIT(0.0)LS(0.0)ECDAEDAGEPR C:Carbamidomethylation,s:Phosphorylated S SIPA1L3 195918.6 4 6 144.1 520.25 HUMAN 1 19.663 -1.2688 PLRLLHPSPDLVSQE-p Q8IY22;S377-p PLRLLHPSPDLVSQE 0.0683636000573323 0.0297439872178124 -0.468 -0.276666666666667 25.1532636664867 20.6585190228624 -0.468 -0.276666666666667 0.00305262624216465 0.00859306501585809 -5.08269877774337 -4.01780400143453 Q8IY22 CMIP Q8IY22.S377.p_CMIP Q8IY22_S377s _1_1_377_377 Q8IY22 Q8IY22|Q8IY22-2|A0A087WY48|Q8IY22-3|A0A087WU05 C-Maf-inducing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21676.21676.3 17.69 17.69 7.019 4 1 1 0 791.4063 2292.2397 S377s TMT10 373 (R) LLHPsPDLVSQEATLSEAR (L) LLHPS(0.99)PDLVS(0.0)QEAT(0.0)LS(0.0)EAR s:Phosphorylated S CMIP 87755.5 1 2 2381.1 85.8 HUMAN 1 -25.1533 -20.6585 PLRPQVVTDDDGQAP-p Q9HDC9;T19-p PLRPQVVTDDDGQAP 0.164162708749184 0.831693474187179 -0.265 -0.033 15.7197994849202 1.12078213308481 -0.265 -0.033 0.0267929202568902 0.772541443416615 -3.01457184753539 -0.303876412860053 Q9HDC9 APMAP Q9HDC9.T19.p_APMAP Q9HDC9_T19t _1_1_19_19 Q9HDC9 Q9HDC9|Q9HDC9-2 Adipocyte plasma membrane-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9209.9209.4 7.63 7.63 99 1 1 1 0 658.3477 2550.404 T19t TMT10 11 (R) RPLRPQVVtDDDGQAPEAK (D) RPLRPQVVT(1.0)DDDGQAPEAK K:TMT10,t:Phosphorylated T APMAP 46650.7 1 2 4467.1 30.97 HUMAN 1 -15.7198 -1.1208 PLRQRSVSLDSQMGY-p Q86UU0;S1480-p PLRQRSVSLDSQMGY 0.766697935852592 0.293040682896119 -0.0463333333333333 0.136 2.21030837884446 7.03756929811752 -0.0463333333333333 0.136 0.601131051543573 0.197807643954183 -0.554888553405947 1.46718039880338 Q86UU0 BCL9L Q86UU0.S1480.p_BCL9L Q86UU0_S1480s_1_1_1480_1480 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37009.37009.2 9.82 9.82 1.172 4 1 1 0 1289.1031 2481.2355 S1480s M1494m TMT10 1478 (R) SVsLDSQMGYLPAPGGmANLPF (-) S(0.0)VS(0.99)LDS(0.0)QM(0.0)GY(0.0)LPAPGGM(0.99)ANLPF s:Phosphorylated S,m:Oxidized methionine BCL9L 157526.3 17 28 139.1 524.37 HUMAN 1 -2.2103 7.0376 PLRQTRSSGSETEQV-p O95251;S100-p PLRQTRSSGSETEQV 0.973941639738379 0.0144161850125245 0.006 0.399333333333333 0.224846927426885 25.5256846958787 0.00599999999999999 0.399333333333334 0.949544466505918 0.002801763869012 0.0662673720219163 5.17152821781771 O95251 KAT7 O95251.S100.p_KAT7 O95251_S99sS100sS102s_3_3_99_102 O95251 O95251|O95251-4 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16206.16206.4 11.77 11.77 1.113 7 3 3 0 771.8389 2844.4376 S99s S100s S102s TMT10 96 (R) QTRssGsETEQVVDFSDRETK (N) QT(0.0)RS(0.99)S(0.99)GS(0.99)ET(0.0)EQVVDFS(0.0)DRET(0.0)K K:TMT10,s:Phosphorylated S KAT7 71325.8 4 19 691.1 243.06 HUMAN 1 0.2248 25.5257 PLRRLEISPDSSPER-p Q99959;S151-p PLRRLEISPDSSPER 0.398511503124105 0.100088196839069 0.120333333333333 -0.450666666666667 7.37403436542976 13.2108642214211 0.120333333333333 -0.450666666666667 0.1830613089787 0.0477434257491048 1.52634006004848 -2.54770884201447 Q99959 PKP2 Q99959.S151.p_PKP2 Q99959_S151s _1_1_151_151 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14508.14508.2 12.93 12.93 1.233 3 1 1 0 769.8688 1458.7638 S151s TMT10 148 (R) LEIsPDSSPER (A) LEIS(0.99)PDS(0.0)S(0.0)PER s:Phosphorylated S PKP2 97926.6 3 7 257.1 399.17 HUMAN 1 7.374 -13.2109 PLRRRAASDGQYENQ-p Q9HBL0;S899-p PLRRRAASDGQYENQ 0.348159266376338 0.227344374739156 0.193333333333333 0.123 8.51435062037503 8.47439770618901 0.193333333333333 0.123 0.140787772580112 0.142088925277189 1.72429147730923 1.71679470350707 Q9HBL0 TNS1 Q9HBL0.S899.p_TNS1 Q9HBL0_S899s _1_1_899_899 Q9HBL0 Q9HBL0 Tensin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7484.7484.3 16.64 16.64 5.183 5 1 1 0 739.6615 2136.9995 S899s TMT10 897 (R) AAsDGQYENQSPEATSPR (S) AAS(0.99)DGQY(0.0)ENQS(0.0)PEAT(0.0)S(0.0)PR s:Phosphorylated S TNS1 186610.9 1 34 183.2 477.16 HUMAN 1 8.5144 8.4744 PLRRRASSASVPAVG-p Q9BZ23;S169-p PLRRRASSASVPAVG 0.0911476413058552 0.0100188558863651 -0.464 -0.446333333333333 22.131409503574 28.0890789545223 -0.464 -0.446333333333333 0.00612151685534497 0.00155271627287126 -4.35204415437595 -5.86262075705223 Q9BZ23 PANK2 Q9BZ23.S169.p_PANK2 Q9BZ23_S169s _1_1_169_169 Q9BZ23 Q9BZ23|Q9BZ23-4|Q9BZ23-3 Pantothenate kinase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10647.10647.2 11.38 11.38 1.133 5 1 1 0 913.9467 1746.9184 S169s TMT10 167 (R) ASsASVPAVGASAEGTR (R) AS(0.0)S(0.99)AS(0.0)VPAVGAS(0.0)AEGT(0.0)R s:Phosphorylated S PANK2 63307.1 2 3 1896.1 108.52 HUMAN 1 -22.1314 -28.0891 PLRSLGLSLSGGDQE-p Q9UJ70-2;S120-p PLRSLGLSLSGGDQE 0.689285002032586 0.496219580390538 0.082 0.0886666666666667 3.03291904536819 4.07024358121058 0.082 0.0886666666666667 0.497402650850912 0.391719906235767 0.727090632441167 0.930373504253312 Q9UJ70 NAGK Q9UJ70.2.S120.p_NAGK Q9UJ70-2_S120sS122s_2_2_120_122 Q9UJ70-2 Q9UJ70-2|H7C3G9|C9JEV6|H7C1L7 Isoform 2 of N-acetyl-D-glucosamine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21787.21787.3 9.18 9.18 9.184 3 2 2 0 650.9539 1790.9082 S120s S122s TMT10 116 (R) SLGLsLsGGDQEDAGR (I) S(0.0)LGLS(0.99)LS(0.99)GGDQEDAGR s:Phosphorylated S NAGK 42436.3 1 2 5484.1 18.9 HUMAN 1 3.0329 4.0702 PLRTVDGSPMMKAAM-p O75781;S162-p PLRTVDGSPMMKAAM 0.41209446543283 0.990381408461536 0.111 -0.00133333333333332 7.10261908430273 0.0617204296603515 0.111 -0.00133333333333332 0.194866906839991 0.985888854733861 1.47896445727681 -0.0185168292913166 O75781 PALM O75781.S162.p_PALM O75781_S162s _1_1_162_162 O75781 O75781|O75781-2|A0A087WTK8|A0A087WWY4 Paralemmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13551.13757.2 10.55 4.62 4.364 2 1 1 0 752.3712 1423.7689 S162s TMT10 158 (R) TVDGsPMMK (A) T(0.0)VDGS(0.99)PMMK K:TMT10,s:Phosphorylated S PALM 42246.4 4 6 1689.1 120.82 HUMAN 1 7.1026 -0.0617 PLRVLAETPDSFEKH-p Q99567;T525-p PLRVLAETPDSFEKH 0.610138431047996 0.035891588053178 -0.0856666666666667 0.263333333333333 3.97619819090678 19.4525370098693 -0.0856666666666667 0.263333333333333 0.400295014241079 0.0113434797217349 -0.912577140893036 3.75903626931417 Q99567 NUP88 Q99567.T525.p_NUP88 Q99567_T525t _1_1_525_525 Q99567 Q99567 Nuclear pore complex protein Nup88 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20034.20034.2 13.7 13.7 2.216 2 1 1 0 887.4586 1693.9413 T525t TMT10 521 (R) VLAEtPDSFEK (H) VLAET(0.99)PDS(0.0)FEK K:TMT10,t:Phosphorylated T NUP88 84681.5 2 9 1211.1 166.39 HUMAN 1 -3.9762 19.4525 PLSARGNSRLNIWGE-p Q12789;S1173-p PLSARGNSRLNIWGE 0.358373343465582 0.102145707141539 0.136333333333333 -0.174 8.28020497970484 13.0885839785081 0.136333333333333 -0.174 0.148586551027424 0.0491067963252347 1.6837370210474 -2.52564457304061 Q12789 GTF3C1 Q12789.S1173.p_GTF3C1 Q12789_S1173s _1_1_1173_1173 Q12789 Q12789|Q12789-3 General transcription factor 3C polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14873.14873.3 12.59 8.19 99 1 1 1 0 561.2838 1601.871 S1173s TMT10 1171 (R) GNsRLNIWGEAR (V) GNS(1.0)RLNIWGEAR s:Phosphorylated S GTF3C1 241209.8 2 7 225.1 425.73 HUMAN 1 8.2802 -13.0886 PLSGACYSPEFKGQI-p P53621-2;S1202-p PLSGACYSPEFKGQI 0.254996768567997 0.448350799052495 -0.208333333333333 0.0733333333333333 11.2878915778005 4.64417957151621 -0.208333333333333 0.0733333333333334 0.0743379948003563 0.343227472993909 -2.20662441727924 1.03823169988087 P53621 COPA P53621.2.S1202.p_COPA P53621-2_S1202s _1_1_1202_1202 P53621-2 P53621-2 Isoform 2 of Coatomer subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19830.19830.3 16.31 16.31 3.61 3 1 1 0 685.3224 1973.9865 S1202s TMT10 1194 (K) CPLSGACYsPEFK (G) CPLS(0.0)GACY(0.0)S(0.99)PEFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S COPA 140918.9 2 13 545.1 275.81 HUMAN 1 -11.2879 4.6442 PLSKEADSWEIIEGL-p Q9BZF3;S69-p PLSKEADSWEIIEGL 0.0871905809717546 0.00129606731851265 -0.969666666666667 -1.01433333333333 22.5708876275652 47.2455123314424 -0.969666666666667 -1.01433333333333 0.00553237024974388 1.88559651504841e-05 -4.4537120107244 -13.9249137074938 Q9BZF3 OSBPL6 Q9BZF3.S69.p_OSBPL6 Q9BZF3_S69s _1_1_69_69 Q9BZF3 Q9BZF3-5|Q9BZF3-3|Q9BZF3-4|Q9BZF3-2|Q9BZF3-6 Oxysterol-binding protein-related protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28607.28607.3 16.76 16.76 99 1 1 1 0 643.3322 1848.0155 S69s TMT10 66 (K) EADsWEIIEGLK (I) EADS(1.0)WEIIEGLK K:TMT10,s:Phosphorylated S OSBPL6 107445.2 1 2 1916.1 107.26 HUMAN 1 -22.5709 -47.2455 PLSKLLGSLDEVVLL-p Q9H1A4;S547-p PLSKLLGSLDEVVLL 0.591058319252429 0.146054179401784 -0.073 -0.206 4.20624810939493 11.0054464329318 -0.073 -0.206 0.379642818574422 0.079333270196516 -0.956354465238746 -2.15609094049572 Q9H1A4 ANAPC1 Q9H1A4.S547.p_ANAPC1 Q9H1A4_S547s _1_1_547_547 Q9H1A4 Q9H1A4 Anaphase-promoting complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37763.37763.3 24.65 24.65 14.374 2 1 1 0 753.4267 2178.2947 S547s TMT10 544 (K) LLGsLDEVVLLSPVPELR (D) LLGS(0.99)LDEVVLLS(0.0)PVPELR s:Phosphorylated S ANAPC1 218664.2 3 8 460.1 305.66 HUMAN 1 -4.2062 -11.0054 PLSKQGGSPDGQGLH-p Q9H7P9;S911-p PLSKQGGSPDGQGLH 0.977130047691108 0.0226595417945672 0.00499999999999999 -0.356666666666667 0.19797753031072 22.4588808254148 0.00499999999999999 -0.356666666666667 0.955437420905791 0.00567690880200152 0.0585165086231991 -4.42285659979625 Q9H7P9 PLEKHG2 Q9H7P9.S911.p_PLEKHG2 Q9H7P9_S911s _1_1_911_911 Q9H7P9 Q9H7P9|Q9H7P9-3|E7ESZ3 Pleckstrin homology domain-containing family G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13638.13638.3 19.09 19.09 9.274 2 1 1 0 743.7199 2149.1766 S911s TMT10 908 (K) QGGsPDGQGLHVSNLPK (Q) QGGS(0.99)PDGQGLHVS(0.0)NLPK K:TMT10,s:Phosphorylated S PLEKHG2 149335.7 1 9 886.1 206.23 HUMAN 1 0.198 -22.4589 PLSPAPLTPATPSSL-p Q7Z6Z7;T3924-p PLSPAPLTPATPSSL 0.486093065914574 0.861382466411476 -0.093 -0.0216666666666666 5.77130842836642 0.913927994512387 -0.093 -0.0216666666666666 0.264770232723942 0.810227912348919 -1.24371488815912 -0.252122045616031 Q7Z6Z7 HUWE1 Q7Z6Z7.T3924.p_HUWE1 Q7Z6Z7_T3924t _1_1_3924_3924 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28561.28561.4 20.31 20.31 2.976 7 1 1 0 1021.029 4001.1424 T3924t TMT10 3905 (R) ESQLAHIKDEPPPLSPAPLtPATPSSLDPFFSR (E) ES(0.0)QLAHIKDEPPPLS(0.0)PAPLT(0.99)PAT(0.0)PS(0.0)S(0.0)LDPFFS(0.0)R K:TMT10,t:Phosphorylated T HUWE1 485818.9 4 65 11.1 1210.45 HUMAN 1 -5.7713 -0.9139 PLSPEIRSPAGSPEL-p Q96JM3;S432-p PLSPEIRSPAGSPEL 0.962335251684196 0.146339254233682 0.00833333333333333 0.182 0.322516955737181 10.9931017005548 0.00833333333333333 0.182 0.928428159848177 0.0795590942026115 0.0940838254515431 2.15393049384296 Q96JM3 CHAMP1 Q96JM3.S432.p_CHAMP1 Q96JM3_S432s _1_1_432_432 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15154.15154.4 11.55 11.55 2.119 3 1 1 0 656.6149 2543.471 S432s TMT10 421 (R) KPGPPLSPEIRsPAGSPELR (K) KPGPPLS(0.0)PEIRS(0.99)PAGS(0.0)PELR K:TMT10,s:Phosphorylated S CHAMP1 90067.4 2 22 25.1 950.05 HUMAN 1 0.3225 10.9931 PLSPGIKSPTIPRAE-p Q9P2B4;S568-p PLSPGIKSPTIPRAE 0.631521203791749 0.231158137142921 -0.0666666666666667 0.17 3.71584539654713 8.37849564206225 -0.0666666666666667 0.17 0.425025963304251 0.145261470342424 -0.862407944379537 1.7001982936361 Q9P2B4 CTTNBP2NL Q9P2B4.S568.p_CTTNBP2NL Q9P2B4_S568s _1_1_568_568 Q9P2B4 Q9P2B4 CTTNBP2 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23601.23601.3 19.87 19.87 1.166 6 1 1 0 824.4743 2391.4376 S568s TMT10 555 (K) VSSPLSPLSPGIKsPTIPR (A) VS(0.0)S(0.0)PLS(0.0)PLS(0.0)PGIKS(0.99)PT(0.0)IPR K:TMT10,s:Phosphorylated S CTTNBP2NL 70613.2 3 7 1031.1 186 HUMAN 1 -3.7158 8.3785 PLSPHNITPEPVSKL-p Q6VMQ6-4;T126-p PLSPHNITPEPVSKL 0.859564008462243 0.119464099601837 -0.0616666666666667 0.292333333333333 1.28283871795884 12.1678523520544 -0.0616666666666667 0.292333333333334 0.744245347125411 0.0607036443527097 -0.343394455084444 2.36094529668597 Q6VMQ6 ATF7IP Q6VMQ6.4.T126.p_ATF7IP Q6VMQ6-4_S121sT126t_2_2_121_126 Q6VMQ6-4 Q6VMQ6-4 Isoform 3 of Activating transcription factor 7-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16682.16682.4 16.14 16.14 4.324 3 2 2 0 899.4346 3434.7829 S121s T126t TMT10 109 (K) NKQDDDLNCEPLsPHNItPEPVSK (L) NKQDDDLNCEPLS(0.99)PHNIT(0.99)PEPVS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T ATF7IP 138346.3 1 17 273.1 392.91 HUMAN 1 -1.2828 12.1679 PLSPRLPSPQQHHRI-p Q68DA7;S530-p PLSPRLPSPQQHHRI 0.552621763725833 0.104471003157736 0.094 0.207 4.75498937404441 12.9608718664264 0.094 0.207 0.334580836476817 0.050572312553553 1.05896115912647 2.50265046041096 Q68DA7 FMN1 Q68DA7.S530.p_FMN1 Q68DA7_S530s _1_1_530_530 Q68DA7 Q68DA7|H0YM30|Q68DA7-2 Formin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.4366.4366.3 8.77 8.77 99 1 1 1 0 470.2401 1328.7385 S530s TMT10 528 (R) LPsPQQHHR (I) LPS(1.0)PQQHHR s:Phosphorylated S FMN1 158887.3 1 1 727.2 236.56 HUMAN 1 4.755 12.9609 PLSPVGTTPVKLKRA-p Q9BVC5;T198-p PLSPVGTTPVKLKRA 0.354637573366403 0.00320981770772267 0.138666666666667 -1.04633333333333 8.36688016044827 37.3696679961399 0.138666666666667 -1.04633333333333 0.145650501378428 0.000183245450214192 1.69875237755687 -9.00893138069545 Q9BVC5 C2orf49 Q9BVC5.T198.p_C2orf49 Q9BVC5_S193sT197tT198t_3_3_193_198 Q9BVC5 Q9BVC5|Q9BVC5-2|C9J4K0 Ashwin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17675.17675.4 8.65 9.54 1.863 6 3 3 0 804.9375 2976.8267 S193s T197t T198t TMT10 181 (R) KSPSGPVKSPPLsPVGttPVK (L) KS(0.0)PS(0.0)GPVKS(0.0)PPLS(0.99)PVGT(0.99)T(0.99)PVK K:TMT10,s:Phosphorylated S,t:Phosphorylated T C2orf49 25915 6 9 1142.1 173.17 HUMAN 1 8.3669 -37.3697 PLSRPIQSPGRNSIS-p P25054;S2323-p PLSRPIQSPGRNSIS 0.840354219140228 0.100088196839069 -0.0393333333333334 -0.237333333333333 1.45889135646684 13.2097877315714 -0.0393333333333333 -0.237333333333333 0.714678742126664 0.0477552614241092 -0.385330665380957 -2.54751439138302 P25054 APC P25054.S2323.p_APC P25054_S2323s _1_1_2323_2323 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6940.6940.4 13.85 9.57 4.056 5 1 1 0 646.8344 2504.3531 S2323s TMT10 2306 (R) DSTPSRPAQQPLSRPIQsPGR (N) DS(0.0)T(0.0)PS(0.0)RPAQQPLS(0.0)RPIQS(0.99)PGR s:Phosphorylated S APC 313808.5 1 34 33.1 890.71 HUMAN 1 -1.4589 -13.2098 PLSSESLSESEYIEE-p Q5BKY9;S196-p PLSSESLSESEYIEE 0.133326246106049 0.408501660235411 -0.293333333333333 0.089 18.0284196994143 5.17465927681085 -0.293333333333333 0.0890000000000001 0.0157455570587903 0.303762439763882 -3.46801916464837 1.1357347106768 Q5BKY9 FAM133B Q5BKY9.S196.p_FAM133B Q5BKY9_S196s _1_1_196_196 Q5BKY9 Q5BKY9|Q5BKY9-2 Protein FAM133B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22158.22158.3 20.01 20.01 1.242 8 1 1 0 1082.5136 3165.555 S196s TMT10 183 (K) MYSEDKPLSSESLsESEYIEEVR (A) MY(0.0)S(0.0)EDKPLS(0.0)S(0.0)ES(0.0)LS(0.99)ES(0.0)EY(0.0)IEEVR K:TMT10,s:Phosphorylated S FAM133B 28384.5 2 3 2537.1 79.38 HUMAN 1 -18.0284 5.1747 PLSSGKVSPESIRTL-p Q9UPX0-2;S783-p PLSSGKVSPESIRTL 0.389300700153236 0.146226824026697 0.127666666666667 -0.152666666666667 7.58208385791656 10.9986524586428 0.127666666666667 -0.152666666666667 0.174498466297048 0.0794574739405128 1.56256737785221 -2.15490189561041 Q9UPX0 IGSF9B Q9UPX0.2.S783.p_IGSF9B Q9UPX0-2_S783s _1_1_783_783 Q9UPX0-2 Q9UPX0-2 Isoform 2 of Protein turtle homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18156.18156.3 10.93 10.93 1.587 6 1 1 0 771.084 2231.2647 S783s TMT10 772 (K) SLESPLSSGKVsPESIR (T) S(0.0)LES(0.0)PLS(0.0)S(0.0)GKVS(0.99)PES(0.0)IR K:TMT10,s:Phosphorylated S IGSF9B 157853.8 1 1 3627.1 46.63 HUMAN 1 7.5821 -10.9987 PLSSPSKSPILSSSA-p Q8IWB9;S170-p PLSSPSKSPILSSSA 0.964995630930211 0.027247526523589 -0.00933333333333334 -0.452666666666667 0.299733069672112 21.2245637285785 -0.00933333333333333 -0.452666666666667 0.933311663149656 0.00754299165320712 -0.0876440688557952 -4.14264053205786 Q8IWB9 TEX2 Q8IWB9.S170.p_TEX2 Q8IWB9_S170s _1_1_170_170 Q8IWB9 Q8IWB9-2|A0A087WVA8 Testis-expressed protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27638.27638.5 23.02 23.02 1.171 19 1 1 0 914.5038 4488.4929 S170s TMT10 158 (K) TSSSSPLSSPSKsPILSSSASTSTLSSAKPFMSLVK (S) T(0.0)S(0.0)S(0.0)S(0.0)S(0.0)PLS(0.0)S(0.0)PS(0.0)KS(0.99)PILS(0.0)S(0.0)S(0.0)AS(0.0)T(0.0)S(0.0)T(0.0)LS(0.0)S(0.0)AKPFMS(0.0)LVK K:TMT10,s:Phosphorylated S TEX2 125928 6 5 300.1 376.78 HUMAN 1 -0.2997 -21.2246 PLSSRTGSPELAARA-p Q9UPX0-2;S1215-p PLSSRTGSPELAARA 0.405110736681515 0.183970635400432 0.122 -0.168333333333333 7.24619003445754 9.6670647874601 0.122 -0.168333333333333 0.188530229654047 0.10796761831191 1.50404238825979 -1.9231730501095 Q9UPX0 IGSF9B Q9UPX0.2.S1215.p_IGSF9B Q9UPX0-2_S1215s _1_1_1215_1215 Q9UPX0-2 Q9UPX0-2 Isoform 2 of Protein turtle homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7432.7432.2 10.37 4.5 2.105 2 1 1 0 605.8058 1130.6367 S1215s TMT10 1213 (R) TGsPELAAR (A) T(0.0)GS(0.99)PELAAR s:Phosphorylated S IGSF9B 157853.8 1 3 3627.1 46.63 HUMAN 1 7.2462 -9.6671 PLSSRTVSSSSLPSL-p J3QS41;S1739-p PLSSRTVSSSSLPSL 0.240695723889364 0.511605430881592 0.212333333333333 -0.062 11.8221913623769 3.90361659020435 0.212333333333333 -0.062 0.0657326080178886 0.407041172819701 2.30083546420026 -0.898510922874618 J3QS41 HELZ J3QS41.S1739.p_HELZ J3QS41_S1739s _1_1_1739_1739 J3QS41 J3QS41 Probable helicase with zinc finger domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22351.22351.2 8.93 8.93 1.124 7 1 1 0 1045.499 2010.0229 S1739s TMT10 1737 (R) TVsSSSLPSLEEYEPR (G) T(0.0)VS(0.99)S(0.0)S(0.0)S(0.0)LPS(0.0)LEEY(0.0)EPR s:Phosphorylated S HELZ 220821.8 1 10 466.1 303.39 HUMAN 1 11.8222 -3.9036 PLTEQTVSQVLQSAK-p F8VVA7;S182-p PLTEQTVSQVLQSAK 0.902213389383327 0.112512204591818 0.0216666666666667 -0.204 0.878133280869679 12.5162336002424 0.0216666666666667 -0.204 0.816933436740352 0.0560243259370385 0.243023741350162 -2.42297850483745 F8VVA7 NotFound F8VVA7.S182.p_NotFound F8VVA7_S182s _1_1_182_182 F8VVA7 F8VVA7|P61923-4|P61923-3|P61923-2|F8W651 Coatomer subunit zeta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28736.28736.4 14.39 14.39 2.629 4 1 1 0 752.4111 2926.6614 S182s TMT10 167 (R) VALRGEDVPLTEQTVsQVLQSAK (E) VALRGEDVPLT(0.0)EQT(0.0)VS(0.99)QVLQS(0.0)AK K:TMT10,s:Phosphorylated S COPZ1 22397.1 2 2 4861.1 25.74 HUMAN 1 0.8781 -12.5162 PLTPGPQSPPTPLAP-p O75398;S176-p PLTPGPQSPPTPLAP 0.238535570822241 0.434464510584299 -0.212333333333333 0.0766666666666667 11.9104114805429 4.82447596338702 -0.212333333333333 0.0766666666666667 0.0644108235367762 0.329270181957246 -2.31645411092418 1.0715818652469 O75398 DEAF1 O75398.S176.p_DEAF1 O75398_S176s _1_1_176_176 O75398 O75398|O75398-3|O75398-4|O75398-5 Deformed epidermal autoregulatory factor 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20908.20908.3 18.89 18.89 3.335 3 1 1 0 916.1584 2666.4918 S176s TMT10 165 (K) GPAAPLTPGPQsPPTPLAPGQEK (G) GPAAPLT(0.0)PGPQS(0.99)PPT(0.0)PLAPGQEK K:TMT10,s:Phosphorylated S DEAF1 60239.3 3 1 3263.1 55.6 HUMAN 1 -11.9104 4.8245 PLTPPLGSPRPRDAR-p Q9H7P9;S450-p PLTPPLGSPRPRDAR 0.149024470822507 0.0221209949411289 -0.247333333333333 -0.313 16.6782717579186 22.6134528577947 -0.247333333333333 -0.313 0.0214868535712749 0.00547841230619158 -3.19953347364808 -4.45875250277723 Q9H7P9 PLEKHG2 Q9H7P9.S450.p_PLEKHG2 Q9H7P9_S450s _1_1_450_450 Q9H7P9 Q9H7P9|Q9H7P9-3|E7ESZ3|Q9H7P9-2 Pleckstrin homology domain-containing family G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18801.18801.4 17.25 12.21 2.115 3 1 1 0 620.613 2399.4539 S450s TMT10 437 (K) SKPVLEPLTPPLGsPRPR (D) S(0.0)KPVLEPLT(0.0)PPLGS(0.99)PRPR K:TMT10,s:Phosphorylated S PLEKHG2 149335.7 1 4 886.1 206.23 HUMAN 1 -16.6783 -22.6135 PLTPPPHSPTSMLQL-p Q9Y2K7;S718-p PLTPPPHSPTSMLQL 0.454295484500348 0.918179306865522 0.101333333333333 0.0116666666666667 6.31995582131284 0.521791032038943 0.101333333333333 0.0116666666666667 0.233348179954739 0.886790224003404 1.34136714840375 0.149197517351147 Q9Y2K7 KDM2A Q9Y2K7.S718.p_KDM2A Q9Y2K7_S718s _1_1_718_718 Q9Y2K7 Q9Y2K7|I3VM54|Q9Y2K7-2|Q9Y2K7-3|Q9Y2K7-5|Q9Y2K7-4 Lysine-specific demethylase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25282.25282.3 18.92 14.1 1.135 6 1 1 0 1106.5343 3237.6234 S718s TMT10 707 (R) SCDEPLTPPPHsPTSMLQLIHDPVSPR (G) S(0.0)CDEPLT(0.0)PPPHS(0.99)PT(0.0)S(0.0)MLQLIHDPVS(0.0)PR C:Carbamidomethylation,s:Phosphorylated S KDM2A 135243.8 7 10 409.1 323.7 HUMAN 1 6.32 0.5218 PLTPRMESHSEDEDL-p Q96MH2;S51-p PLTPRMESHSEDEDL 0.944472313305406 0.0584289270728927 0.0106666666666667 0.255666666666667 0.490203553470052 16.4297115648058 0.0106666666666667 0.255666666666667 0.893263615559195 0.0227524853560721 0.140610622486157 3.14884097873023 Q96MH2 HEXIM2 Q96MH2.S51.p_HEXIM2 Q96MH2_S51sS53s_2_2_51_53 Q96MH2 Q96MH2 Protein HEXIM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24572.24572.4 15.82 15.82 15.817 3 2 2 0 677.2844 2546.1779 S51s S53s TMT10 49 (R) MEsHsEDEDLAGAVGGLGWNSR (S) MES(0.99)HS(0.99)EDEDLAGAVGGLGWNS(0.0)R s:Phosphorylated S HEXIM2 32760.3 8 16 1285.1 158.28 HUMAN 1 0.4902 16.4297 PLTQVAAS_______-p Q9Y2Q5;S125-p PLTQVAAS_______ 0.0963407255186167 0.255170453943128 -0.463333333333333 -0.268666666666667 21.5517544322387 7.81377534958694 -0.463333333333333 -0.268666666666667 0.00699559335862613 0.165433121754249 -4.22017275883229 -1.60234264494486 Q9Y2Q5 LAMTOR2 Q9Y2Q5.S125.p_LAMTOR2 Q9Y2Q5_S125s _1_1_125_125 Q9Y2Q5 Q9Y2Q5 Ragulator complex protein LAMTOR2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37199.37199.2 21 21 7.873 3 1 1 0 1120.5804 2160.175 S125s TMT10 108 (K) AQALVQYLEEPLTQVAAs (-) AQALVQY(0.0)LEEPLT(0.0)QVAAS(0.99) s:Phosphorylated S LAMTOR2 13621.4 1 1 5279.1 21 HUMAN 1 -21.5518 -7.8138 PLVKRERSDPNHSLQ-p P48378;S714-p PLVKRERSDPNHSLQ 0.213229385106179 0.0189613448383213 0.287666666666667 -0.493 12.9434741644131 23.6836357547364 0.287666666666667 -0.493 0.0507753099956533 0.0042818990536349 2.50088624219609 -4.71244137035853 P48378 RFX2 P48378.S714.p_RFX2 P48378_S714s _1_1_714_714 P48378 P48378 DNA-binding protein RFX2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8747.8747.3 7.46 7.46 5.095 2 1 1 0 554.6 1581.8182 S714s TMT10 712 (R) ERsDPNHSLQGI (-) ERS(0.99)DPNHS(0.0)LQGI s:Phosphorylated S RFX2 80385.2 1 8 1675.2 121.84 HUMAN 1 12.9435 -23.6836 PLVVQRESAEEAWGT-p Q6QNY0;S89-p PLVVQRESAEEAWGT 0.772986242826669 0.513498525501199 -0.051 0.0716666666666667 2.13704575949336 3.88390726920275 -0.051 0.0716666666666667 0.611357752888087 0.408892620872277 -0.538942362055348 0.894723984899175 Q6QNY0 BLOC1S3 Q6QNY0.S89.p_BLOC1S3 Q6QNY0_S89s _1_1_89_89 Q6QNY0 Q6QNY0 Biogenesis of lysosome-related organelles complex 1 subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23564.23564.3 9.97 5.72 2.307 2 1 1 0 1099.2076 3215.6534 S89s TMT10 79 (R) DLPPLVVQREsAEEAWGTEEAPAPAPAR (S) DLPPLVVQRES(0.99)AEEAWGT(0.0)EEAPAPAPAR s:Phosphorylated S BLOC1S3 21369.4 1 2 4375.1 32.5 HUMAN 1 -2.137 3.8839 PLWKVRRSQKLDMSA-p Q9Y5S2;S868-p PLWKVRRSQKLDMSA 0.950509137543367 0.473349491362873 -0.0196666666666667 0.072 0.434345469121751 4.32969633522616 -0.0196666666666667 0.072 0.904826795089032 0.369003398901716 -0.125277293904997 0.979473590169321 Q9Y5S2 CDC42BPB Q9Y5S2.S868.p_CDC42BPB Q9Y5S2_S868s _1_1_868_868 Q9Y5S2 Q9Y5S2 Serine/threonine-protein kinase MRCK beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9123.9123.3 11.44 11.44 5.507 2 1 1 0 525.2781 1493.851 S868s TMT10 868 (R) sQKLDMSAR (L) S(0.99)QKLDMS(0.0)AR K:TMT10,s:Phosphorylated S CDC42BPB 196308.8 2 4 1601.1 128.56 HUMAN 1 -0.4343 4.3297 PLWQHARSPPVTQSR-p A0A1B0GW72;S1131-p PLWQHARSPPVTQSR 0.433059154805943 0.0569475871668631 -0.173 -0.306 6.69462809038123 16.5827434427448 -0.173 -0.306 0.214060823066736 0.02196471920856 -1.40744630135911 -3.17855027396023 A0A1B0GW72 NotFound A0A1B0GW72.S1131.p_NotFound A0A1B0GW72_S1131s _1_1_1131_1131 A0A1B0GW72 A0A1B0GW72|Q96PX9 Pleckstrin homology domain-containing family G member 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13208.13208.4 10.98 10.98 1.44 3 1 1 0 635.6086 2459.44 S1131s TMT10 1122 (K) KLPLWQHARsPPVTQSR (S) KLPLWQHARS(0.99)PPVT(0.0)QS(0.0)R K:TMT10,s:Phosphorylated S PLEKHG4B 181102.6 1 9 1118.1 175.42 HUMAN 1 -6.6946 -16.5827 PLYAPNLSPPADSRI-p Q92610;S573-p PLYAPNLSPPADSRI 0.287218129279298 0.177169515262384 0.166666666666667 0.149 10.2152827124902 9.88520309636163 0.166666666666667 0.149 0.0951637897365695 0.102678541326895 2.01913849099057 1.96099027615083 Q92610 ZNF592 Q92610.S573.p_ZNF592 Q92610_S573s _1_1_573_573 Q92610 Q92610|H0YM74 Zinc finger protein 592 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21938.21938.4 18.32 18.32 2.682 5 1 1 0 660.8397 2560.3721 S573s TMT10 558 (K) VLHSSNPVPLYAPNLsPPADSR (I) VLHS(0.0)S(0.0)NPVPLY(0.0)APNLS(0.99)PPADS(0.0)R s:Phosphorylated S ZNF592 140207.3 3 13 164.1 494.76 HUMAN 1 10.2153 9.8852 PLYQAGLTPPLSPPK-p Q9ULL5-3;T1304-p PLYQAGLTPPLSPPK 0.559790063080621 0.0173834041086758 0.100333333333333 0.43 4.65081640390628 24.2576550232077 0.100333333333333 0.43 0.342703357761199 0.00375175523911674 1.03966131324697 4.85236416022867 Q9ULL5 PRR12 Q9ULL5.3.T1304.p_PRR12 Q9ULL5-3_T1304tS1308s_2_2_1304_1308 Q9ULL5-3 Q9ULL5-3|Q9ULL5-2 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19448.19448.3 14.77 14.77 14.767 3 2 2 0 863.1265 2427.4277 T1304t S1308s TMT10 1294 (K) RHPPLYQAGLtPPLsPPK (S) RHPPLY(0.0)QAGLT(0.99)PPLS(0.99)PPK K:TMT10,t:Phosphorylated T,s:Phosphorylated S PRR12 212010 1 23 182.1 477.91 HUMAN 1 4.6508 24.2577 PMAADEGSAEKQAGE-p Q9H9B1;S38-p PMAADEGSAEKQAGE 0.315881742386154 0.157413377993272 -0.196333333333333 0.149333333333333 9.36782718282023 10.5607100910996 -0.196333333333333 0.149333333333333 0.115669080101454 0.0878878804427038 -1.87205653685542 2.07842183607338 Q9H9B1 EHMT1 Q9H9B1.S38.p_EHMT1 Q9H9B1_S38s _1_1_38_38 Q9H9B1 Q9H9B1|Q9H9B1-3 Histone-lysine N-methyltransferase EHMT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21297.21297.3 13.39 13.39 2.763 3 1 1 0 839.4014 2436.2216 S38s TMT10 23 (K) TELLGEETPMAADEGsAEK (Q) T(0.0)ELLGEET(0.0)PMAADEGS(0.99)AEK K:TMT10,s:Phosphorylated S EHMT1 144088.3 1 1 1454.1 140.61 HUMAN 1 -9.3678 10.5607 PMAPAPASPGSSNDS-p Q66K74;S759-p PMAPAPASPGSSNDS 0.528963129635769 0.523913007828133 0.105666666666667 -0.0613333333333333 5.11795216107964 3.7724887648087 0.105666666666667 -0.0613333333333333 0.307754763588853 0.419518506122648 1.1256301698953 -0.873241081456655 Q66K74 MAP1S Q66K74.S759.p_MAP1S Q66K74_S759s _1_1_759_759 Q66K74 Q66K74|Q66K74-2 Microtubule-associated protein 1S HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12914.13194.3 23.7 23.7 5.941 5 1 1 0 727.0078 2099.0389 S759s TMT10 750 (K) AVPMAPAPAsPGSSNDSSAR (S) AVPMAPAPAS(0.99)PGS(0.0)S(0.0)NDS(0.0)S(0.0)AR s:Phosphorylated S MAP1S 113179.3 14 11 456.1 307.14 HUMAN 1 5.118 -3.7725 PMASGASSA______-p Q8WWI5;S656-p PMASGASSA______ 0.425533171530256 0.27612215831907 0.113 -0.147666666666667 6.83559290052909 7.3643823470382 0.113 -0.147666666666667 0.207224313682531 0.183468607734316 1.43220280775652 -1.52421433371727 Q8WWI5 SLC44A1 Q8WWI5.S656.p_SLC44A1 Q8WWI5_S656s _1_1_656_656 Q8WWI5 Q8WWI5 Choline transporter-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14521.14521.2 13 13 1.239 3 1 1 0 843.9301 1606.8875 S656s TMT10 646 (R) ELKPMASGASsA (-) ELKPMAS(0.0)GAS(0.0)S(0.99)A K:TMT10,s:Phosphorylated S SLC44A1 74841.2 5 2 4083.1 37.95 HUMAN 1 6.8356 -7.3644 PMDQRAESPEEVACR-p Q7Z6Z7;S1395-p PMDQRAESPEEVACR 0.521309922362563 0.701479166606427 0.100333333333333 0.0423333333333334 5.23123035532955 2.1165454370911 0.100333333333333 0.0423333333333334 0.299831297723675 0.614250411776013 1.14626842896333 0.534396519986154 Q7Z6Z7 HUWE1 Q7Z6Z7.S1395.p_HUWE1 Q7Z6Z7_S1395s _1_1_1395_1395 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20880.20880.5 22.53 18.66 6.597 2 1 1 0 688.9418 3360.7114 S1395s TMT10 1378 (R) AIAMSLGQDIPMDQRAEsPEEVACRK (E) AIAMS(0.0)LGQDIPMDQRAES(0.99)PEEVACRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HUWE1 485818.9 30 11 11.1 1210.45 HUMAN 1 5.2312 2.1165 PMDTSVLSEEGGEPF-p Q12888-2;S403-p PMDTSVLSEEGGEPF 0.90916953958039 0.154024216095244 -0.0276666666666667 -0.223 0.812273674469411 10.6838170621946 -0.0276666666666667 -0.223 0.829416427046234 0.0854315515467734 -0.226102874139059 -2.09988906651156 Q12888 TP53BP1 Q12888.2.S403.p_TP53BP1 Q12888-2_S403s _1_1_403_403 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19716.19716.3 19.2 18.62 4.473 3 1 1 0 997.1693 2909.517 S403s TMT10 393 (R) QDKPMDTSVLsEEGGEPFQK (K) QDKPMDT(0.0)S(0.0)VLS(0.99)EEGGEPFQK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 7 19 3.1 2297.07 HUMAN 1 -0.8123 -10.6838 PMDVWHNSANKCAFR-p Q9ULI0;S1126-p PMDVWHNSANKCAFR 0.825130077485234 0.0122646504762075 -0.058 -0.506333333333333 1.60969510082015 26.684935573433 -0.058 -0.506333333333333 0.69028826426204 0.00214539094195068 -0.420519794286047 -5.47612859535911 Q9ULI0 ATAD2B Q9ULI0.S1126.p_ATAD2B Q9ULI0_S1126s _1_1_1126_1126 Q9ULI0 Q9ULI0|Q9ULI0-2 ATPase family AAA domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11933.11933.3 8.2 8.2 99 1 1 1 0 574.5951 1641.8005 S1126s Hydrogen 1118 (R) NPMDVWHNsANK (C) NPMDVWHNS(1.0)ANK K:TMT10-Lys-Only,s:Phosphorylated S ATAD2B 166451.5 1 9 531.1 280.81 HUMAN 1 -1.6097 -26.6849 PMEPAGVSPMPGTQK-p Q6IBW4-4;S208-p PMEPAGVSPMPGTQK 0.736926628232361 0.612238582904788 0.0503333333333333 -0.0506666666666667 2.51194155310488 2.89479497956546 0.0503333333333333 -0.0506666666666667 0.560797210473669 0.513476416971279 0.619410829800776 -0.698865619617253 Q6IBW4 NCAPH2 Q6IBW4.4.S208.p_NCAPH2 Q6IBW4-4_S208s _1_1_208_208 Q6IBW4-4 Q6IBW4-4|A0A0A6YYG7|Q6IBW4-2|Q6IBW4-5 Isoform 4 of Condensin-2 complex subunit H2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30360.30360.4 21.75 21.75 2.248 3 1 1 0 804.3828 3134.5435 S208s TMT10 190 (R) GAFMLEPEGMSPMEPAGVsPMPGTQK (D) GAFMLEPEGMS(0.0)PMEPAGVS(0.99)PMPGT(0.0)QK K:TMT10,s:Phosphorylated S NCAPH2 68752.9 7 4 1022.1 187.64 HUMAN 1 2.5119 -2.8948 PMKPVPGTPPSSKAK-p Q15648;T1215-p PMKPVPGTPPSSKAK 0.204544620519167 0.499703516476031 0.191 0.08 13.338444779206 4.0315541783874 0.191 0.08 0.0463612911105152 0.395225158376418 2.57223548145818 0.922999183764585 Q15648 MED1 Q15648.T1215.p_MED1 Q15648_T1215t _1_1_1215_1215 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17650.17854.3 16.97 16.97 4.364 4 1 1 0 787.7788 2281.3557 T1215t TMT10 1205 (K) LASPMKPVPGtPPSSK (A) LAS(0.0)PMKPVPGT(0.99)PPS(0.0)S(0.0)K K:TMT10,t:Phosphorylated T MED1 169445 4 17 115.1 566.87 HUMAN 1 13.3384 4.0316 PMKQGVLTHGRVRLL-p P62753;T69-p PMKQGVLTHGRVRLL 0.183867376773632 0.0078345649628161 0.281666666666667 0.461 14.4659652720884 30.0413304188889 0.281666666666667 0.461 0.0357604909720355 0.000990528459654388 2.77887960730589 6.43449071802242 P62753 RPS6 P62753.T69.p_RPS6 P62753_T69t _1_1_69_69 P62753 P62753|A2A3R5 40S ribosomal protein S6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4290.4290.3 10.75 10.75 99 1 1 1 0 392.8737 1096.6425 T69t TMT10 65 (K) QGVLtHGR (V) QGVLT(1.0)HGR t:Phosphorylated T RPS6 28851.3 1 2 2203.1 93.5 HUMAN 1 14.466 30.0413 PMLEQAISPKPQSQK-p A8MW92;S313-p PMLEQAISPKPQSQK 0.822315684676711 0.43910939708751 -0.039 -0.0763333333333333 1.63528675026486 4.76219991208281 -0.039 -0.0763333333333333 0.686232567251641 0.334025796906184 -0.426428195857072 -1.06008847692789 A8MW92 PHF20L1 A8MW92.S313.p_PHF20L1 A8MW92_S313s _1_1_313_313 A8MW92 A8MW92|F8W9L8|A0A0A0MQS0|A8MW92-4 PHD finger protein 20-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19518.19518.5 12.31 12.31 2 4 1 1 0 937.7049 4604.5255 S313s TMT10 289 (K) AVGVDGAEKKEDYNETAPMLEQAIsPKPQSQK (K) AVGVDGAEKKEDY(0.0)NET(0.0)APMLEQAIS(0.99)PKPQS(0.0)QK K:TMT10,s:Phosphorylated S PHF20L1 116320.5 2 2 1882.1 109.28 HUMAN 1 -1.6353 -4.7622 PMLGSAETPPPVPAP-p O15164;T101-p PMLGSAETPPPVPAP 0.834167016519627 0.0441530066196113 0.0536666666666667 0.307666666666667 1.5199807830824 18.1466144117285 0.0536666666666667 0.307666666666667 0.704696187141372 0.0153228150235523 0.399663772200964 3.48911237563915 O15164 TRIM24 O15164.T101.p_TRIM24 O15164_T101t _1_1_101_101 O15164 O15164|O15164-2 Transcription intermediary factor 1-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36680.36680.3 27.69 27.69 1.106 8 1 1 0 1395.7174 4105.1704 T101t TMT10 88 (R) YLMLPAPMLGSAEtPPPVPAPGSPVSGSSPFATQVGVIR (C) Y(0.0)LMLPAPMLGS(0.0)AET(0.99)PPPVPAPGS(0.0)PVS(0.0)GS(0.0)S(0.0)PFAT(0.0)QVGVIR t:Phosphorylated T TRIM24 118769 9 1 598.1 263.51 HUMAN 1 1.52 18.1466 PMLKGEKSDEDKDKE-p O94826;S279-p PMLKGEKSDEDKDKE 0.12962229198994 0.0151762863813809 -0.523 0.785333333333333 18.3835793891289 25.1594608335889 -0.523 0.785333333333333 0.0145091530231749 0.00304827340212988 -3.54031458635057 5.07788640792098 O94826 TOMM70A O94826.S279.p_TOMM70A O94826_S279s _1_1_279_279 O94826 O94826 Mitochondrial import receptor subunit TOM70 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11916.11916.4 13.39 8.68 99 1 1 1 0 808.6902 3151.7707 S279s TMT10 276 (K) GEKsDEDKDKEGEALEVK (E) GEKS(1.0)DEDKDKEGEALEVK K:TMT10,s:Phosphorylated S TOMM70 68138.3 4 6 776.1 227.2 HUMAN 1 -18.3836 25.1595 PMLKSGMSPEQSRFQ-p Q9UQ35;S1132-p PMLKSGMSPEQSRFQ 0.455518671348657 0.669915888461763 0.181 0.0780000000000001 6.29984255689982 2.37781045737482 0.181 0.0780000000000001 0.23443138012817 0.578387574265585 1.33780720836428 0.590861864848965 Q9UQ35 SRRM2 Q9UQ35.S1132.p_SRRM2 Q9UQ35_S1132s_1_1_1132_1132 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16526.16526.3 14.26 14.26 2.19 12 1 1 0 1187.2012 3463.6233 M1131m S1132s TMT10 1129 (K) SGmsPEQSRFQSDSSSYPTVDSNSLLGQSR (L) S(0.0)GM(1.0)S(0.99)PEQS(0.0)RFQS(0.0)DS(0.0)S(0.0)S(0.0)Y(0.0)PT(0.0)VDS(0.0)NS(0.0)LLGQS(0.0)R m:Oxidized methionine,s:Phosphorylated S SRRM2 300351.7 12 62 2.1 3310.34 HUMAN 1 6.2998 2.3778 PMLQRTKSRIEQGIV-p Q8IWT6;S217-p PMLQRTKSRIEQGIV 0.171158122502722 0.907217183601252 -0.257 -0.017 15.2898182763399 0.591869009807561 -0.257 -0.017 0.0295813624249641 0.872595761263146 -2.93298564390337 -0.168101783367991 Q8IWT6 LRRC8A Q8IWT6.S217.p_LRRC8A Q8IWT6_S217s _1_1_217_217 Q8IWT6 Q8IWT6 Volume-regulated anion channel subunit LRRC8A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9703.9703.3 9.25 4.88 99 1 1 1 0 494.5943 1401.8011 S217s TMT10 217 (K) sRIEQGIVDR (S) S(1.0)RIEQGIVDR s:Phosphorylated S LRRC8A 95109.8 2 3 3842.1 41.84 HUMAN 1 -15.2898 -0.5919 PMNELDESEEEEMIT-p Q96GA3;S331-p PMNELDESEEEEMIT 0.189388000089707 0.297272783794614 -0.281666666666667 -0.130333333333333 14.1510663922842 6.95419587585766 -0.281666666666667 -0.130333333333333 0.0384497358704094 0.20164172887213 -2.72069691357995 -1.45259434985213 Q96GA3 LTV1 Q96GA3.S331.p_LTV1 Q96GA3_S331s _1_1_331_331 Q96GA3 Q96GA3 Protein LTV1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37731.37731.5 23.11 18.61 1.624 3 1 1 0 897.4333 4403.1661 S331s TMT10 312 (K) LNTLEPLEDQDLPMNELDEsEEEEMITVVLEEAK (E) LNT(0.0)LEPLEDQDLPMNELDES(0.99)EEEEMIT(0.0)VVLEEAK K:TMT10,s:Phosphorylated S LTV1 55082.2 12 1 3986.1 39.69 HUMAN 1 -14.1511 -6.9542 PMPASRGSYHLDWDK-p Q9Y6A5;S402-p PMPASRGSYHLDWDK 0.146592070323056 0.00190027809892951 -0.297333333333333 -0.926333333333333 16.978280185842 42.6877142244879 -0.297333333333333 -0.926333333333334 0.0200526595917371 5.38553158837653e-05 -3.25835812140347 -11.4089036243694 Q9Y6A5 TACC3 Q9Y6A5.S402.p_TACC3 Q9Y6A5_S402s _1_1_402_402 Q9Y6A5 Q9Y6A5 Transforming acidic coiled-coil-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26995.26995.4 14.5 14.5 7.221 3 1 1 0 799.1235 3113.5079 S402s Hydrogen 401 (R) GsYHLDWDKMDDPNFIPFGGDTK (S) GS(0.99)Y(0.0)HLDWDKMDDPNFIPFGGDT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S TACC3 91213.8 5 7 1278.1 159 HUMAN 1 -16.9783 -42.6877 PMPFRKCSNPDVASG-p O15021;S137-p PMPFRKCSNPDVASG 0.368479250934454 0.24654721306722 0.163333333333333 0.153666666666667 8.03909881884237 8.01371284427664 0.163333333333333 0.153666666666667 0.157068869569699 0.157989678588749 1.64194255219137 1.63701954021198 O15021 MAST4 O15021.S137.p_MAST4 O15021_S137s _1_1_137_137 O15021 O15021|J3QT34 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7640.7640.3 15.72 15.72 1.955 2 1 1 0 695.3642 2004.1151 S137s TMT10 135 (R) KCsNPDVASGPGK (S) KCS(0.99)NPDVAS(0.0)GPGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MAST4 286597.7 2 2 121.99 549.41 HUMAN 1 8.0391 8.0137 PMPPNRISHGEVLEW-p Q9BXP5;S655-p PMPPNRISHGEVLEW 0.840696231762748 0.471000085835072 0.03 0.0793333333333334 1.45563236235865 4.35849880921551 0.03 0.0793333333333334 0.715215246279844 0.366564260069153 0.384562951751306 0.984888150830218 Q9BXP5 SRRT Q9BXP5.S655.p_SRRT Q9BXP5_S655s _1_1_655_655 Q9BXP5 Q9BXP5|Q9BXP5-3|Q9BXP5-2|Q9BXP5-4|Q9BXP5-5 Serrate RNA effector molecule homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17423.17423.4 13.83 13 99 1 1 1 0 654.0912 2533.375 S655s TMT10 647 (R) GPMPPNRIsHGEVLEWQK (T) GPMPPNRIS(1.0)HGEVLEWQK K:TMT10,s:Phosphorylated S SRRT 101121.1 1 13 321.1 364.45 HUMAN 1 1.4556 4.3585 PMRERSKTEEDILRA-p Q63HQ0;T228-p PMRERSKTEEDILRA 0.860894111325596 0.142962756165978 -0.0276666666666667 0.149666666666667 1.27071584621841 11.1320948173763 -0.0276666666666667 0.149666666666667 0.746325731637249 0.0770531713806475 -0.340470853466652 2.17827185614713 Q63HQ0 AP1AR Q63HQ0.T228.p_AP1AR Q63HQ0_T228t _1_1_228_228 Q63HQ0 Q63HQ0|Q63HQ0-2 AP-1 complex-associated regulatory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9248.9248.2 12.84 5.01 1.197 2 1 1 0 700.3554 1319.7368 T228t Hydrogen 226 (R) SKtEEDILR (A) S(0.0)KT(0.99)EEDILR K:TMT10-Lys-Only,t:Phosphorylated T AP1AR 34622.2 4 3 3217.1 57.07 HUMAN 1 -1.2707 11.1321 PMVAGPLSPQLLTSP-p Q9HBE1-2;S243-p PMVAGPLSPQLLTSP 0.354167941195422 0.516746931250503 -0.139333333333333 -0.0706666666666666 8.3779185462322 3.84971629020592 -0.139333333333333 -0.0706666666666666 0.145280774147157 0.4121244409041 -1.70066435047582 -0.888145187471726 Q9HBE1 PATZ1 Q9HBE1.2.S243.p_PATZ1 Q9HBE1-2_S243s _1_1_243_243 Q9HBE1-2 Q9HBE1-2|Q9HBE1-4 Isoform 2 of POZ-, AT hook-, and zinc finger-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36477.36477.5 27.99 29.56 4.38 8 1 1 0 1094.8129 5390.0438 S243s TMT10 215 (R) AAGAAIAGQASLPVLPGVDRLPMVAGPLsPQLLTSPFPSVASSAPPLTGKR (G) AAGAAIAGQAS(0.0)LPVLPGVDRLPMVAGPLS(0.99)PQLLT(0.0)S(0.0)PFPS(0.0)VAS(0.0)S(0.0)APPLT(0.0)GKR K:TMT10,s:Phosphorylated S PATZ1 59135.1 2 3 1807.2 113.57 HUMAN 1 -8.3779 -3.8497 PMYGVQKYDPINSML-p Q9H3K2;Y313-p PMYGVQKYDPINSML 0.518846820664332 0.664471107475736 -0.094 -0.0493333333333333 5.26610534399208 2.4302418609582 -0.094 -0.0493333333333334 0.297433215080674 0.571446811602068 -1.15260734970963 -0.602030596853988 Q9H3K2 GHITM Q9H3K2.Y313.p_GHITM Q9H3K2_Y313y_1_1_313_313 Q9H3K2 Q9H3K2 Growth hormone-inducible transmembrane protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.29009.29009.5 8.66 4.62 2.435 7 1 1 0 767.5596 3737.8725 Y313y M331m TMT10 313 (K) yDPINSMLSIYMDTLNIFmRVATMLATGGNR (K) Y(0.99)DPINS(0.0)M(0.0)LS(0.0)IY(0.0)M(0.0)DT(0.0)LNIFM(0.99)RVAT(0.0)M(0.0)LAT(0.0)GGNR y:Phosphorylated Y,m:Oxidized methionine GHITM 37375.7 3 1 6926.1 8.66 HUMAN 1 -5.2661 -2.4302 PMYRREGSYDRYLRM-p Q9HCD5;S126-p PMYRREGSYDRYLRM 0.616086499555268 0.189261458943136 0.0983333333333333 0.388 3.90434489256946 9.50743658763233 0.0983333333333333 0.388 0.406972918626826 0.112009882393107 0.898800344656476 1.89552272867305 Q9HCD5 NCOA5 Q9HCD5.S126.p_NCOA5 Q9HCD5_S126s _1_1_126_126 Q9HCD5 Q9HCD5 Nuclear receptor coactivator 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11012.11012.3 9.6 9.6 7.573 3 1 1 0 489.8997 1387.7167 S126s TMT10 124 (R) EGsYDRYLR (M) EGS(0.99)Y(0.0)DRY(0.0)LR s:Phosphorylated S NCOA5 65763.5 6 10 426.1 319.02 HUMAN 1 3.9043 9.5074 PNAGSDRSFVWHALD-p P49792;S1263-p PNAGSDRSFVWHALD 0.52190969118178 0.0729982561252292 0.0853333333333333 -0.227333333333333 5.22173794820468 15.0971809778301 0.0853333333333333 -0.227333333333333 0.300487357960823 0.0309230200632031 1.14454187449662 -2.89479349162073 P49792 RANBP2 P49792.S1263.p_RANBP2 P49792_S1263s _1_1_1263_1263 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31611.31611.5 24.55 24.55 1.211 4 1 1 0 810.4213 3968.1071 S1263s TMT10 1254 (K) LTPNAGSDRsFVWHALDYADELPKPEQLAIR (F) LT(0.0)PNAGS(0.0)DRS(0.99)FVWHALDY(0.0)ADELPKPEQLAIR K:TMT10,s:Phosphorylated S RANBP2 362585.9 2 20 9.1 1298.62 HUMAN 1 5.2217 -15.0972 PNATRVLTPPQAAGD-p Q96QT6;T671-p PNATRVLTPPQAAGD 0.488015843560099 0.612238582904788 0.0923333333333333 0.0483333333333334 5.73940299242086 2.89524210855117 0.0923333333333334 0.0483333333333334 0.26672252923141 0.513423554597769 1.23799792205023 0.698957118371335 Q96QT6 PHF12 Q96QT6.T671.p_PHF12 Q96QT6_T671t _1_1_671_671 Q96QT6 Q96QT6|Q96QT6-3|Q96QT6-5|C9J9G2|Q96QT6-2|Q96QT6-4 PHD finger protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22521.22521.3 24.9 24.9 17.581 3 1 1 0 768.4026 2223.2295 T671t TMT10 669 (R) VLtPPQAAGDGILATTANQR (F) VLT(0.99)PPQAAGDGILAT(0.0)T(0.0)ANQR t:Phosphorylated T PHF12 111750.5 7 9 626.1 258.17 HUMAN 1 5.7394 2.8952 PNDTCLASCVKSDHS-p O95857;S143-p PNDTCLASCVKSDHS 0.74680279001455 0.0653471268018565 0.052 0.216 2.40741034842887 15.7652509876436 0.052 0.216 0.574458903803636 0.0265139785888852 0.59724835690143 3.02114863910403 O95857 TSPAN13 O95857.S143.p_TSPAN13 O95857_S143s _1_1_143_143 O95857 O95857 Tetraspanin-13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15490.15490.2 15.37 15.37 3.386 3 1 1 0 1052.0043 2023.0353 S143s TMT10 133 (R) SVNPNDTCLAsCVK (S) S(0.0)VNPNDT(0.0)CLAS(0.99)CVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TSPAN13 22831.4 5 1 5917.1 15.37 HUMAN 1 2.4074 15.7653 PNFNRTNSPGFQKKV-p Q5T8P6-3;S518-p PNFNRTNSPGFQKKV 0.734309391897347 0.0212409029466939 0.0506666666666667 0.312 2.53933621034386 22.881922425474 0.0506666666666667 0.312 0.557270917502656 0.00515000626607176 0.625185953079743 4.52153883769163 Q5T8P6 RBM26 Q5T8P6.3.S518.p_RBM26 Q5T8P6-3_S518s _1_1_518_518 Q5T8P6-3 A0A087X0H9|Q5T8P6|Q5T8P6-2|Q5T8P6-3|Q5T8P6-4|Q5T8P6-5 Isoform 3 of RNA-binding protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9883.9883.3 9.53 9.02 2.492 2 1 1 0 472.9146 1336.7625 S518s TMT10 516 (R) TNsPGFQK (K) T(0.0)NS(0.99)PGFQK K:TMT10,s:Phosphorylated S RBM26 111063.2 4 2 2123.1 96.71 HUMAN 1 2.5393 22.8819 PNFTRHPSLIKLVKS-p A0AVK6;S396-p PNFTRHPSLIKLVKS 0.019376665224519 0.0420412298500095 0.816 -0.762666666666667 40.0243089696692 18.4446628752003 0.816 -0.762666666666667 9.94418288841854e-05 0.0143065103201768 10.1658141483348 -3.54982510287366 A0AVK6 E2F8 A0AVK6.S396.p_E2F8 A0AVK6_S396s _1_1_396_396 A0AVK6 A0AVK6 Transcription factor E2F8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11961.11961.5 7.85 7.85 7.85 2 1 1 0 453.2679 2182.3428 S396s TMT10 387 (R) GKPNFTRHPsLIK (L) GKPNFT(0.0)RHPS(0.99)LIK K:TMT10,s:Phosphorylated S E2F8 94792 1 5 1788.1 114.89 HUMAN 1 40.0243 -18.4447 PNGDLQNSPPPACRK-p Q9Y3M8;S314-p PNGDLQNSPPPACRK 0.79879406065728 0.380800619074585 0.037 0.0843333333333334 1.88008787606879 5.57054823626774 0.037 0.0843333333333334 0.648621309073991 0.277297003372901 0.482079784638621 1.20739472037753 Q9Y3M8 STARD13 Q9Y3M8.S314.p_STARD13 Q9Y3M8_S314s _1_1_314_314 Q9Y3M8 Q9Y3M8|Q9Y3M8-2|Q9Y3M8-4|Q9Y3M8-3|Q9Y3M8-5 StAR-related lipid transfer protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18612.18612.3 20.74 15.76 99 1 1 1 0 1011.8363 2953.5211 S314s TMT10 300 (K) AMQCIQIPNGDLQNsPPPACRK (G) AMQCIQIPNGDLQNS(1.0)PPPACRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S STARD13 126277.4 21 4 564.1 271.22 HUMAN 1 1.8801 5.5705 PNGEVSLSVPDLIHK-p A1L170-2;S241-p PNGEVSLSVPDLIHK 0.597752423488761 0.00347379750641649 -0.101333333333333 0.716666666666667 4.12819333609694 36.7617367435116 -0.101333333333333 0.716666666666667 0.386527739051113 0.000210778507817855 -0.941555907610813 8.76596560854493 A1L170 C1orf226 A1L170.2.S241.p_C1orf226 A1L170-2_S241s_1_1_241_241 A1L170-2 A1L170-2 Isoform 2 of Uncharacterized protein C1orf226 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.30168.30368.3 19.17 19.17 1.205 2 1 1 0 786.1027 2275.3426 N235n S241s TMT10 232 (K) VLPnGEVSLsVPDLIHK (D) VLPN(1.0)GEVS(0.0)LS(0.99)VPDLIHK K:TMT10,n:Deamidated,s:Phosphorylated S C1orf226 33805.4 9 3 1114.1 175.67 HUMAN 1 -4.1282 36.7617 PNGLDGMSLSPPGAR-p Q53TQ3-2;S130-p PNGLDGMSLSPPGAR 0.862029975440239 0.864252658206572 -0.032 -0.0176666666666666 1.26114741739499 0.893528500030891 -0.032 -0.0176666666666666 0.747971858279674 0.814042632368777 -0.338159913446493 -0.246929734165589 Q53TQ3 INO80D Q53TQ3.2.S130.p_INO80D Q53TQ3-2_S130s _1_1_130_130 Q53TQ3-2 Q53TQ3-2 Isoform 2 of INO80 complex subunit D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22845.23050.3 19.7 19.7 2.253 2 1 1 0 636.9685 1828.9247 S130s TMT10 122 (K) MPNGLDGMsLSPPGAR (V) MPNGLDGMS(0.99)LS(0.0)PPGAR s:Phosphorylated S INO80D 114398.2 8 1 3658.1 45.92 HUMAN 1 -1.2611 -0.8935 PNGWQYHSPSRPGST-p Q5VTI5;S296-p PNGWQYHSPSRPGST 0.463914516513225 0.807171853699684 -0.155666666666667 -0.027 6.15362313529269 1.30149304657261 -0.155666666666667 -0.027 0.24245865210578 0.741055432518043 -1.31188444457404 -0.347848122236495 Q5VTI5 NotFound Q5VTI5.S296.p_NotFound Q5VTI5_S296s _1_1_296_296 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10630.10630.5 17.26 14.24 2.238 7 1 1 0 880.0121 4316.0568 S296s TMT10 279 (R) VPGGGEQPAQPNGWQYHsPSRPGSTAFPSQDGETGGHRR (S) VPGGGEQPAQPNGWQY(0.0)HS(0.99)PS(0.0)RPGS(0.0)T(0.0)AFPS(0.0)QDGET(0.0)GGHRR s:Phosphorylated S PLEKHA6 119745.7 2 9 52.1 743.36 HUMAN 1 -6.1536 -1.3015 PNIIHIDSENLSETV-p Q14D04;S518-p PNIIHIDSENLSETV 0.66434278289756 0.0326638458820616 -0.0746666666666667 0.277666666666667 3.32365190580709 20.0513396877005 -0.0746666666666667 0.277666666666667 0.465194754935092 0.00988248198271205 -0.78541678232133 3.88632856953383 Q14D04 VEPH1 Q14D04.S518.p_VEPH1 Q14D04_S518s _1_1_518_518 Q14D04 Q14D04|Q14D04-2 Ventricular zone-expressed PH domain-containing protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25560.25560.4 17.83 17.83 1.194 8 1 1 0 846.9277 3304.7313 S518s TMT10 501 (R) SQLGESSVSYPNIIHIDsENLSETVK (E) S(0.0)QLGES(0.0)S(0.0)VS(0.0)Y(0.0)PNIIHIDS(0.99)ENLS(0.0)ET(0.0)VK K:TMT10,s:Phosphorylated S VEPH1 95542.4 7 10 341.1 353.64 HUMAN 1 -3.3237 20.0513 PNINARSSWPNSEKH-p Q9ULV0;S1290-p PNINARSSWPNSEKH 0.0395731079578075 0.692709778334704 -0.593666666666667 0.0433333333333333 31.4205737378113 2.18813821546605 -0.593666666666667 0.0433333333333334 0.000721012221398842 0.604207592663742 -6.87625323793774 0.550008795683015 Q9ULV0 MYO5B Q9ULV0.S1290.p_MYO5B Q9ULV0_S1290s _1_1_1290_1290 Q9ULV0 Q9ULV0 Unconventional myosin-Vb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11196.11399.2 11.68 5.66 1.481 3 1 1 0 736.8633 1392.7524 S1290s TMT10 1289 (R) SsWPNSEK (H) S(0.0)S(0.99)WPNS(0.0)EK K:TMT10,s:Phosphorylated S MYO5B 215266.1 1 62 296.7 379.15 HUMAN 1 -31.4206 2.1881 PNIPKAKSLDGVTND-p Q9UBM7;S14-p PNIPKAKSLDGVTND 0.800325882980012 0.409694468324875 0.0406666666666667 -0.147333333333333 1.86356207366264 5.15713811039966 0.0406666666666667 -0.147333333333333 0.651094149027382 0.304990413641656 0.478370302062581 -1.13254299542721 Q9UBM7 DHCR7 Q9UBM7.S14.p_DHCR7 Q9UBM7_S14s _1_1_14_14 Q9UBM7 Q9UBM7 7-dehydrocholesterol reductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9096.9096.2 10.89 5.5 3.822 2 1 1 0 857.4512 1633.9274 S14s TMT10 12 (K) AKsLDGVTNDR (T) AKS(0.99)LDGVT(0.0)NDR K:TMT10,s:Phosphorylated S DHCR7 55230.1 2 2 4859.1 25.78 HUMAN 1 1.8636 -5.1571 PNIQAVRTQEKEQIK-p P05787;T89-p PNIQAVRTQEKEQIK 0.994167574639875 0.10743514083302 0.00133333333333332 0.212 0.0505428284945087 12.7953164891924 0.00133333333333333 0.212 0.988429542257382 0.0525373727456794 0.0151839540686042 2.47291731584182 P05787 KRT8 P05787.T89.p_KRT8 P05787_T89t _1_1_89_89 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36239.36239.5 27.06 27.06 7.498 7 1 1 0 990.7254 4869.6185 T89t TMT10 48 (R) GGLGGGYGGASGMGGITAVTVNQSLLSPLVLEVDPNIQAVRtQEK (E) GGLGGGY(0.0)GGAS(0.0)GMGGIT(0.0)AVT(0.0)VNQS(0.0)LLS(0.0)PLVLEVDPNIQAVRT(0.99)QEK K:TMT10,t:Phosphorylated T KRT8 53703.3 1 17 69.1 672.47 HUMAN 1 0.0505 12.7953 PNKELPPSPEKKTKP-p E7EVA0;S1841-p PNKELPPSPEKKTKP 0.930920423214409 0.00150398419880163 -0.014 -0.994333333333333 0.617068982221954 45.5675077089356 -0.014 -0.994333333333334 0.867547178691324 2.77491209001182e-05 -0.174858672876856 -12.9431872695624 E7EVA0 NotFound E7EVA0.S1841.p_NotFound E7EVA0_S1841s _1_1_1841_1841 E7EVA0 E7EVA0|P27816|P27816-6|P27816-4|F8W9U4|P27816-5|P27816-3 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10772.11494.2 13.91 9.51 99 1 1 1 0 896.5132 1712.0561 S1841s TMT10 1837 (K) ELPPsPEKK (T) ELPPS(1.0)PEKK K:TMT10,s:Phosphorylated S MAP4 246695.2 23 29 38.1 865.62 HUMAN 1 -0.6171 -45.5675 PNKQGPPSPCQQLVL-p Q9C0H5-2;S366-p PNKQGPPSPCQQLVL 0.181904475638205 0.0435328037042934 -0.247333333333333 -0.245333333333333 14.5715140838388 18.236363987384 -0.247333333333333 -0.245333333333333 0.034901861566568 0.015009409316494 -2.79846790519465 -3.50734069422817 Q9C0H5 ARHGAP39 Q9C0H5.2.S366.p_ARHGAP39 Q9C0H5-2_S366s _1_1_366_366 Q9C0H5-2 Q9C0H5-2 Isoform 2 of Rho GTPase-activating protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18968.18968.2 16.63 16.63 6.418 2 1 1 0 1046.0576 2011.1411 S366s TMT10 362 (K) QGPPsPCQQLVLTK (Q) QGPPS(0.99)PCQQLVLT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARHGAP39 126053.9 4 7 910.1 201.84 HUMAN 1 -14.5715 -18.2364 PNKQPESSL______-p Q9Y6M5;S506-p PNKQPESSL______ 0.0665039288523731 0.00544848158522519 -0.393333333333333 -0.672 25.3799593077064 32.8405615527839 -0.393333333333333 -0.672 0.00289737073520451 0.000519928764198317 -5.14065695998812 -7.33204542441538 Q9Y6M5 SLC30A1 Q9Y6M5.S506.p_SLC30A1 Q9Y6M5_S506s _1_1_506_506 Q9Y6M5 Q9Y6M5 Zinc transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12827.12827.2 11.34 11.34 1.554 2 1 1 0 891.9463 1702.9198 S506s TMT10 497 (K) NMPNKQPESsL (-) NMPNKQPES(0.0)S(0.99)L K:TMT10,s:Phosphorylated S SLC30A1 56325.8 4 4 2465.1 82.17 HUMAN 1 -25.38 -32.8406 PNKRHSPSPRPRAPQ-p A9Z1X7;S694-p PNKRHSPSPRPRAPQ 0.222412362935146 0.00898490162031833 0.283 0.789666666666667 12.5598671350675 28.9803778596688 0.283 0.789666666666667 0.0554642681037921 0.00126462631336107 2.4320514962122 6.11853371522003 A9Z1X7 NotFound A9Z1X7.S694.p_NotFound A9Z1X7_S694s _1_1_694_694 A9Z1X7 A9Z1X7 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3021.3021.3 9.85 9.85 1.703 2 1 1 0 414.8817 1162.6643 S694s TMT10 691 (R) HSPsPRPR (A) HS(0.0)PS(0.99)PRPR s:Phosphorylated S SRRM1 103445.7 2 38 8.1 1346.57 HUMAN 1 12.5599 28.9804 PNKRKGFSEGLWEIE-p P51858;S83-p PNKRKGFSEGLWEIE 0.68946595735862 0.398330814470603 -0.054 0.0996666666666667 3.02727366896012 5.31464740575919 -0.054 0.0996666666666667 0.498049642965448 0.294127247956715 -0.72594646418329 1.16117160030473 P51858 HDGF P51858.S83.p_HDGF P51858_S83s _1_1_83_83 P51858 P51858-3|P51858-2 Hepatoma-derived growth factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29175.29175.3 15.34 13.94 8.573 2 1 1 0 786.7317 2278.212 S83s TMT10 81 (K) GFsEGLWEIENNPTVK (A) GFS(0.99)EGLWEIENNPT(0.0)VK K:TMT10,s:Phosphorylated S HDGF 26901.9 1 2 213.1 437.7 HUMAN 1 -3.0273 5.3146 PNKVIIPSPPKDDSP-p Q96JM2-3;S1747-p PNKVIIPSPPKDDSP 0.109204251400589 0.060367363409736 -0.494 -0.331333333333333 20.1543062806116 16.2404235288625 -0.494 -0.331333333333333 0.00965093458497061 0.0237660850578927 -3.91214468840469 -3.11225109454576 Q96JM2 ZNF462 Q96JM2.3.S1747.p_ZNF462 Q96JM2-3_S1747s _1_1_1747_1747 Q96JM2-3 Q96JM2-3|Q96JM2-2 Isoform 3 of Zinc finger protein 462 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20853.20853.4 18.39 18.39 6.4 3 1 1 0 704.3861 2734.5504 S1747s TMT10 1743 (K) VIIPsPPKDDSPQLSEELRR (A) VIIPS(0.99)PPKDDS(0.0)PQLS(0.0)EELRR K:TMT10,s:Phosphorylated S ZNF462 296246.7 1 9 736.1 235.26 HUMAN 1 -20.1543 -16.2404 PNLAQWDSPDPLRPL-p Q4VC44;S591-p PNLAQWDSPDPLRPL 0.650902803157408 0.847372792881644 -0.075 -0.029 3.49895125519854 1.00922836105598 -0.075 -0.029 0.446791471408314 0.792642151799938 -0.820054222802062 -0.276164430660858 Q4VC44 FLYWCH1 Q4VC44.S591.p_FLYWCH1 Q4VC44_S591s_1_1_591_591 Q4VC44 Q4VC44-3|Q4VC44-2|Q4VC44-4|Q4VC44-5 FLYWCH-type zinc finger-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.33056.33056.4 9.85 9.85 99 1 1 1 0 747.6284 2906.5151 N585n S591s TMT10 581 (R) EHFPnLAQWDsPDPLRPLEFLR (T) EHFPN(1.0)LAQWDS(1.0)PDPLRPLEFLR n:Deamidated,s:Phosphorylated S FLYWCH1 81305.1 2 3 2534.1 79.6 HUMAN 1 -3.499 -1.0092 PNLLNRASPLAFNIA-p Q9Y4F3;S768-p PNLLNRASPLAFNIA 0.171306633335012 0.24782644049199 0.283333333333333 0.187666666666667 15.2693115816525 7.98180340110337 0.283333333333333 0.187666666666667 0.0297213712028574 0.159154770209991 2.92911506152104 1.63148793745127 Q9Y4F3 KIAA0430 Q9Y4F3.S768.p_KIAA0430 Q9Y4F3_S768s_1_1_768_768 Q9Y4F3 Q9Y4F3|Q9Y4F3-5|Q9Y4F3-4|Q9Y4F3-3|F8VVB8 Meiosis regulator and mRNA stability factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29988.29988.4 22.36 22.36 0.949 8 1 1 0 1259.5872 4954.3573 S768s N789n TMT10 758 (R) SMSPNLLNRAsPLAFNIANSSSEADCPDPFAnGADVQVSNIDYR (L) S(0.0)MS(0.0)PN(0.0)LLN(0.0)RAS(0.99)PLAFN(0.0)IAN(0.50)S(0.0)S(0.0)S(0.0)EADCPDPFAN(0.50)GADVQVS(0.0)N(0.0)IDY(0.0)R C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated MARF1 195936.7 1 4 1655.1 123.29 HUMAN 1 15.2693 7.9818 PNLPPFPSPADVKET-p Q68CZ2;S811-p PNLPPFPSPADVKET 0.674428060156492 0.108161504240115 -0.105333333333333 -0.242666666666667 3.20665138655311 12.7629258852289 -0.105333333333333 -0.242666666666667 0.477897613032828 0.0529306724524328 -0.762081887904936 -2.46710971683142 Q68CZ2 TNS3 Q68CZ2.S811.p_TNS3 Q68CZ2_S811s _1_1_811_811 Q68CZ2 Q68CZ2|Q68CZ2-2 Tensin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28170.28170.3 16.41 16.41 10.31 2 1 1 0 831.7698 2413.3168 S811s TMT10 798 (K) AGVDYAPNLPPFPsPADVK (E) AGVDY(0.0)APNLPPFPS(0.99)PADVK K:TMT10,s:Phosphorylated S TNS3 156460.9 5 11 183.1 477.16 HUMAN 1 -3.2067 -12.7629 PNLPRHISLTLPATF-p Q9H7P6;S224-p PNLPRHISLTLPATF 0.0596422750038118 0.0645436584836467 -0.719333333333333 0.221666666666667 26.7632802418988 15.8414384948082 -0.719333333333333 0.221666666666667 0.00210703609679745 0.0260529046798808 -5.50467602510263 3.03568495927997 Q9H7P6 MVB12B Q9H7P6.S224.p_MVB12B Q9H7P6_S224s _1_1_224_224 Q9H7P6 Q9H7P6 Multivesicular body subunit 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23613.23613.3 13.61 13.61 2.113 3 1 1 0 522.2874 1484.8787 S224s TMT10 222 (R) HIsLTLPATFR (G) HIS(0.99)LT(0.0)LPAT(0.0)FR s:Phosphorylated S MVB12B 36018.3 1 1 4260.1 34.55 HUMAN 1 -26.7633 15.8414 PNNEPLFSPASEVPR-p Q8WYP5-2;S2155-p PNNEPLFSPASEVPR 0.488653105925393 0.00399310420694075 0.119 -0.566666666666667 5.7279745159618 35.3589095157792 0.119 -0.566666666666667 0.26742533493387 0.000291144807131391 1.23594899176423 -8.22728351073158 Q8WYP5 AHCTF1 Q8WYP5.2.S2155.p_AHCTF1 Q8WYP5-2_S2155s_1_1_2155_2155 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31228.31228.5 20.26 16.79 0.638 3 1 1 0 655.3522 3191.7716 N2150n S2155s TMT10 2139 (K) AILLPDLSEPNnEPLFsPASEVPRK (A) AILLPDLS(0.0)EPN(0.50)N(0.50)EPLFS(0.99)PAS(0.0)EVPRK K:TMT10,n:Deamidated,s:Phosphorylated S AHCTF1 258049.6 2 34 40.1 829.79 HUMAN 1 5.728 -35.3589 PNPEELPSPEQLKGR-p Q8N3E9;S469-p PNPEELPSPEQLKGR 0.809043984703868 0.486589563508319 -0.047 -0.068 1.76745215738978 4.17939119823996 -0.047 -0.068 0.665663561482589 0.381997816222936 -0.456663762938516 -0.951102349347564 Q8N3E9 PLCD3 Q8N3E9.S469.p_PLCD3 Q8N3E9_S469s _1_1_469_469 Q8N3E9 Q8N3E9 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34928.34928.4 12.26 10.29 1.237 4 1 1 0 971.7505 3803.9964 S469s TMT10 445 (R) HLCTILGDMLVTQALDSPNPEELPsPEQLK (G) HLCT(0.0)ILGDMLVT(0.0)QALDS(0.0)PNPEELPS(0.99)PEQLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PLCD3 90169.7 1 4 1567.1 131.06 HUMAN 1 -1.7675 -4.1794 PNPIMTDTPIPRNSQ-p Q92859;T1188-p PNPIMTDTPIPRNSQ 0.612109580584136 0.183970635400432 0.0703333333333333 0.147 3.9522119820003 9.6670992793131 0.0703333333333333 0.147 0.402511971619969 0.107966760831885 0.907983813889421 1.92317902664678 Q92859 NEO1 Q92859.T1188.p_NEO1 Q92859_T1188t_1_1_1188_1188 Q92859 Q92859-3|Q92859-4|Q92859-2 Neogenin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16953.16953.4 7.63 3.44 0 9 1 1 0 1202.3 4708.2794 M1185m T1188t N1207n N1213n TMT10 1178 (K) SPDPNPImTDtPIPRNSQDITPVDNSMDSnIHQRRnSYR (G) S(0.0)PDPN(0.0)PIM(0.99)T(0.0)DT(0.99)PIPRN(0.0)S(0.0)QDIT(0.0)PVDN(0.50)S(0.0)M(0.0)DS(0.0)N(0.50)IHQRRN(0.99)S(0.0)Y(0.0)R m:Oxidized methionine,t:Phosphorylated T,n:Deamidated NEO1 160755.3 3 2 2803.1 70.06 HUMAN 1 3.9522 9.6671 PNQGRPDSPVYANLQ-p Q1RLN5;S240-p PNQGRPDSPVYANLQ 0.379231264309477 0.163187274357617 0.134666666666667 0.153666666666667 7.77975175039772 10.3518162043704 0.134666666666667 0.153666666666667 0.166734251776545 0.0922185691665105 1.59692866391553 2.0420460225585 Q1RLN5 ARHGAP12 Q1RLN5.S240.p_ARHGAP12 Q1RLN5_S240s _1_1_240_240 Q1RLN5 Q8IWW6|Q8IWW6-4|Q8IWW6-2|Q1RLN5|Q8IWW6-3 ARHGAP12 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19120.19352.4 15.26 15.26 5.205 4 1 1 0 734.3832 2854.5463 S240s TMT10 229 (R) ATTPPNQGRPDsPVYANLQELK (I) AT(0.0)T(0.0)PPNQGRPDS(0.99)PVY(0.0)ANLQELK K:TMT10,s:Phosphorylated S ARHGAP12 91157.4 4 7 974.1 193.01 HUMAN 1 7.7798 10.3518 PNQRLCASGAGATPD-p P53384;S33-p PNQRLCASGAGATPD 0.181858235181653 0.974718273747839 -0.369 0.004 14.5752856136622 0.15717797161755 -0.369 0.00400000000000002 0.0348715650104707 0.964455519440202 -2.79916866372944 0.0466588172800345 P53384 NUBP1 P53384.S33.p_NUBP1 P53384_S33s _1_1_33_33 P53384 P53384|P53384-2 Cytosolic Fe-S cluster assembly factor NUBP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23114.23114.3 16.34 12.78 3.379 3 1 1 0 781.3963 2262.2052 S33s TMT10 30 (R) LCAsGAGATPDTAIEEIK (E) LCAS(0.99)GAGAT(0.0)PDT(0.0)AIEEIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NUBP1 35161.5 1 1 2910.1 66.16 HUMAN 1 -14.5753 0.1572 PNRETIGSAQCKELF-p E7ETA6;S168-p PNRETIGSAQCKELF 0.0802188320632121 0.011424576419287 0.97 -0.721666666666667 23.401101325586 27.1823761834816 0.97 -0.721666666666667 0.00456972291505232 0.00191320885227063 4.64989281526544 -5.61078764748972 E7ETA6 PCM1 E7ETA6.S168.p_PCM1 E7ETA6_S168s _1_1_168_168 E7ETA6 E7ETA6|A6NNN6|E9PGW9 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7705.7705.4 12.23 12.23 1.777 5 1 1 0 732.8777 2848.519 S168s TMT10 153 (K) SKDASTNPPNRETIGsAQCK (E) S(0.0)KDAS(0.0)T(0.0)NPPNRET(0.0)IGS(0.99)AQCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PCM1 229381.8 1 8 13.1 1159.95 HUMAN 1 23.4011 -27.1824 PNSAILLSPVETPYA-p A0A0C4DG86;S560-p PNSAILLSPVETPYA 0.851878330458589 0.0183440882261755 0.05 0.386 1.34819810455615 23.9002374603428 0.05 0.386 0.733128646410808 0.00407358003973834 0.359075588415868 4.76491645979003 A0A0C4DG86 NotFound A0A0C4DG86.S560.p_NotFound A0A0C4DG86_S560s _1_1_560_560 A0A0C4DG86 A0A0C4DG86 Syntabulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22780.22780.3 24.21 24.21 3.405 4 1 1 0 1034.179 3020.5639 S560s TMT10 552 (R) NPNSAILLsPVETPYANVDAEVHANR (L) NPNS(0.0)AILLS(0.99)PVET(0.0)PY(0.0)ANVDAEVHANR s:Phosphorylated S SYBU 73794.4 1 4 2641.1 75.45 HUMAN 1 1.3482 23.9002 PNSGGTKSDSASDSQ-p O60551;S66-p PNSGGTKSDSASDSQ 0.682264803548482 0.0130174372408007 -0.0946666666666667 0.385 3.11190427367337 26.257287678974 -0.0946666666666667 0.385 0.488438144360785 0.00236739775863744 -0.74305109648346 5.36228486026057 O60551 NMT2 O60551.S66.p_NMT2 O60551_S66s _1_1_66_66 O60551 O60551 Glycylpeptide N-tetradecanoyltransferase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7711.7711.5 9.19 5.56 1.113 6 1 1 0 613.1243 2981.6197 S66s TMT10 57 (K) EKPNSGGTKsDSASDSQEIK (I) EKPNS(0.0)GGT(0.0)KS(0.99)DS(0.0)AS(0.0)DS(0.0)QEIK K:TMT10,s:Phosphorylated S NMT2 57321.5 2 2 2519.1 80.26 HUMAN 1 -3.1119 26.2573 PNSLRLASDSDAESD-p Q8WXG6;S818-p PNSLRLASDSDAESD 0.152872172873321 0.144602789549265 -0.246666666666667 -0.175666666666667 16.4012556443644 11.0621497174109 -0.246666666666667 -0.175666666666667 0.0229020540643844 0.0783041948318714 -3.14561970592042 -2.16601813733908 Q8WXG6 MADD Q8WXG6.S818.p_MADD Q8WXG6_S818s _1_1_818_818 Q8WXG6 Q8WXG6|Q8WXG6-2|A0A0A0MRB5|Q8WXG6-3|Q8WXG6-7 MAP kinase-activating death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7157.7157.2 14.85 10.14 1.148 4 1 1 0 781.3323 1481.6917 S818s TMT10 816 (R) LAsDSDAESDSR (A) LAS(0.99)DS(0.0)DAES(0.0)DS(0.0)R s:Phosphorylated S MADD 184612.2 1 5 546.1 275.73 HUMAN 1 -16.4013 -11.0621 PNSPRIGSPLSPKKN-p Q659C4;S340-p PNSPRIGSPLSPKKN 0.196556058078888 0.0242925225921455 0.242666666666667 0.331 13.7676303358376 21.9999929539909 0.242666666666667 0.331 0.0419988081822191 0.00630958368148457 2.65035330057239 4.31736222225897 Q659C4 LARP1B Q659C4.S340.p_LARP1B Q659C4_S340s _1_1_340_340 Q659C4 Q659C4|Q659C4-2|Q659C4-9|D6R9W6|Q659C4-4 La-related protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16837.16837.2 13.43 8.73 2.516 2 1 1 0 668.8855 1256.7978 S340s TMT10 338 (R) IGsPLSPK (K) IGS(0.99)PLS(0.0)PK K:TMT10,s:Phosphorylated S LARP1B 105833.8 7 4 551.1 274.41 HUMAN 1 13.7676 22 PNSQRKISADTIGDE-p P81274;S483-p PNSQRKISADTIGDE 0.650233925009295 0.0270155431439455 -0.066 -0.374333333333333 3.50604995382243 21.2865780344152 -0.0690179917482928 -0.374333333333333 0.446061771292578 0.0074360482065028 -0.821448986369358 -4.15645396477197 P81274 GPSM2 P81274.S483.p_GPSM2 P81274_S483s _1_1_483_483 P81274 P81274 G-protein-signaling modulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32394.32394.4 17.85 17.85 1.25 3 1 1 0 631.3303 2442.3281 S483s TMT10 481 (R) KIsADTIGDEGFFDLLSR (F) KIS(0.99)ADT(0.0)IGDEGFFDLLS(0.0)R K:TMT10,s:Phosphorylated S GPSM2 77402.4 2 2 3014.1 63.23 HUMAN 1 -3.506 -21.2866 PNSSEEDSPIKSDKE-p Q8IYH5;S135-p PNSSEEDSPIKSDKE 0.204713889706557 0.0824598277305984 0.203333333333333 -0.295 13.3205243877317 14.3581499948346 0.203333333333333 -0.295 0.0465529879846179 0.0366593702768918 2.56898731894448 -2.75721036791401 Q8IYH5 ZZZ3 Q8IYH5.S135.p_ZZZ3 Q8IYH5_S130sS131sS135s_3_3_130_135 Q8IYH5 Q8IYH5|Q8IYH5-2|Q8IYH5-4 ZZ-type zinc finger-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13745.13745.4 7.57 7.57 7.568 6 3 3 0 869.6437 3235.6533 S130s S131s S135s TMT10 125 (R) SEAPNssEEDsPIKSDKESVEQR (S) S(0.0)EAPNS(0.99)S(0.99)EEDS(0.99)PIKS(0.0)DKES(0.0)VEQR K:TMT10,s:Phosphorylated S ZZZ3 103390.7 2 12 1027.1 186.83 HUMAN 1 13.3205 -14.3581 PNSSTPASPPGTASG-p Q8WV28;S219-p PNSSTPASPPGTASG 0.563706289752441 0.454012197506422 0.08 0.107333333333333 4.58658423620412 4.57130746397909 0.08 0.107333333333333 0.347809609171121 0.349035220963674 1.02772159505931 1.02468502143811 Q8WV28 BLNK Q8WV28.S219.p_BLNK Q8WV28_S219s _1_1_219_219 Q8WV28 Q8WV28|Q8WV28-3 B-cell linker protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5475.5680.3 16.57 12.89 3.105 8 1 1 0 780.0642 2258.2141 S219s TMT10 209 (R) STKPNSSTPAsPPGTASGR (N) S(0.0)T(0.0)KPNS(0.0)S(0.0)T(0.0)PAS(0.99)PPGT(0.0)AS(0.0)GR K:TMT10,s:Phosphorylated S BLNK 50636.6 2 4 1637.1 124.96 HUMAN 1 4.5866 4.5713 PNSVSELSLASLTEK-p Q5M775;S369-p PNSVSELSLASLTEK 0.625010568942101 0.0310889125388133 0.0836666666666667 -0.29 3.79144810265426 20.3703815205496 0.0836666666666667 -0.29 0.417691069366966 0.00918251926020898 0.877048750870536 -3.95510420766413 Q5M775 SPECC1 Q5M775.S369.p_SPECC1 Q5M775_S366sS369s_2_2_366_369 Q5M775 Q5M775|Q5M775-4 Cytospin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26939.26939.3 15.23 15.23 3.495 9 2 2 0 948.4493 2683.386 S366s S369s TMT10 355 (K) CSTAGSSPNSVsELsLASLTEK (I) CS(0.0)T(0.0)AGS(0.0)S(0.0)PNS(0.0)VS(0.99)ELS(0.99)LAS(0.0)LT(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SPECC1 119267.5 1 26 330.1 358.68 HUMAN 1 3.7914 -20.3704 PNTAQRGSPGGPEFL-p Q4VC44;S503-p PNTAQRGSPGGPEFL 0.984413225811297 0.297745000696589 0.00399999999999999 0.104333333333333 0.137705547697555 6.94543781256448 0.00399999999999999 0.104333333333333 0.968789549231151 0.202048773621815 0.040969298041441 1.45106120507495 Q4VC44 FLYWCH1 Q4VC44.S503.p_FLYWCH1 Q4VC44_S503s _1_1_503_503 Q4VC44 Q4VC44|Q4VC44-2|Q4VC44-4 FLYWCH-type zinc finger-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18198.18198.3 16.5 5.87 99 1 1 1 0 509.6062 1446.8357 S503s TMT10 502 (R) GsPGGPEFLK (T) GS(1.0)PGGPEFLK K:TMT10,s:Phosphorylated S FLYWCH1 81305.1 4 2 2534.1 79.6 HUMAN 1 0.1377 6.9454 PNTDDEDSDYHQEAY-p Q9UH92-3;S61-p PNTDDEDSDYHQEAY 0.805400905500171 0.116089728800882 0.0493333333333333 -0.190666666666667 1.81105936239229 12.3369524603791 0.0493333333333334 -0.190666666666667 0.659013124407264 0.0583854664180224 0.466540965280896 -2.39101448483911 Q9UH92 MLX Q9UH92.3.S61.p_MLX Q9UH92-3_T56tS61s_2_2_56_61 Q9UH92-3 Q9UH92|Q9UH92-3 Isoform Beta of Max-like protein X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13649.13649.3 17.93 17.93 1.921 10 2 2 0 1203.1726 3446.5872 N55n T56t S61s TMT10 42 (R) ANSIGSTSASSVPntDDEDsDYHQEAYK (E) AN(0.0)S(0.0)IGS(0.0)T(0.0)S(0.0)AS(0.0)S(0.0)VPN(0.99)T(0.99)DDEDS(0.99)DY(0.0)HQEAY(0.0)K K:TMT10,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S MLX 28053.8 4 7 2068.1 99.55 HUMAN 1 1.8111 -12.337 PNTKDFDSSEDEKHS-p P46100;S849-p PNTKDFDSSEDEKHS 0.638049908822708 0.0878791840660886 0.098 -0.22 3.64200841503445 13.9811033334786 0.098 -0.22 0.432313859244347 0.0399843155934307 0.848049205246825 -2.68783994317659 P46100 ATRX P46100.S849.p_ATRX P46100_S849sS850s_2_2_849_850 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8623.8623.4 10.1 10.1 10.102 3 2 2 0 568.5105 2111.086 S849s S850s TMT10 846 (K) DFDssEDEKHSK (K) DFDS(0.99)S(0.99)EDEKHS(0.0)K K:TMT10,s:Phosphorylated S ATRX 285034.2 13 49 18.1 1035.36 HUMAN 1 3.642 -13.9811 PNVFGKESKKKELVN-p Q9H4M9;S326-p PNVFGKESKKKELVN 0.365498843349433 0.183669890211405 -0.188 -0.152666666666667 8.11669310955224 9.67807447938064 -0.188 -0.152666666666667 0.154287481187085 0.107694258914702 -1.65539788115895 -1.92508078822675 Q9H4M9 EHD1 Q9H4M9.S326.p_EHD1 Q9H4M9_S326s _1_1_326_326 Q9H4M9 A0A024R571|Q9H4M9 EH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18980.18980.3 11.81 11.81 99 1 1 1 0 678.3647 1953.1082 S326s TMT10 317 (K) EMPNVFGKEsK (K) EMPNVFGKES(1.0)K K:TMT10,s:Phosphorylated S EHD1 60682.8 1 5 1572.1 130.65 HUMAN 1 -8.1167 -9.6781 PNVGLRRSGQIEGVR-p Q8WWQ0;S692-p PNVGLRRSGQIEGVR 0.729488445744597 0.0111399909144521 0.0573333333333333 -0.570666666666667 2.60106887270276 27.3516976187234 0.0573333333333333 -0.570666666666667 0.549405639129514 0.00184005260058514 0.638151065807134 -5.65718264409058 Q8WWQ0 PHIP Q8WWQ0.S692.p_PHIP Q8WWQ0_S692s _1_1_692_692 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7563.7563.2 11.29 11.29 99 1 1 1 0 577.7926 1074.6105 S692s TMT10 692 (R) sGQIEGVR (Q) S(1.0)GQIEGVR s:Phosphorylated S PHIP 208454.1 2 6 108.1 577.05 HUMAN 1 2.6011 -27.3517 PNVNTTASGVEDLNI-p P78347;S839-p PNVNTTASGVEDLNI 0.471941186312508 0.2190451438942 0.133333333333333 0.141 6.0187544512879 8.68037154314568 0.133333333333333 0.141 0.250106255906034 0.135507347954026 1.28790386441654 1.75242844907942 P78347 GTF2I P78347.S839.p_GTF2I P78347_S839s _1_1_839_839 P78347 P78347 General transcription factor II-I HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.28574.28574.4 21.57 18.94 1.13 7 1 1 0 1052.526 4127.1508 S839s TMT10 828 (K) INSSPNVNTTAsGVEDLNIIQVTIPDDDNERLSK (V) INS(0.0)S(0.0)PNVNT(0.0)T(0.0)AS(0.99)GVEDLNIIQVT(0.0)IPDDDNERLS(0.0)K K:TMT10,s:Phosphorylated S GTF2I 112927.8 2 14 140.1 523.54 HUMAN 1 6.0188 8.6804 PNVVQVKSPEGKFQK-p Q6P158;S1230-p PNVVQVKSPEGKFQK 0.918430174900821 0.915561788193964 -0.0166666666666667 -0.0146666666666667 0.719331050486864 0.538409384793175 -0.0166666666666667 -0.0146666666666666 0.847357923746606 0.883403390040246 -0.201913849099057 -0.153702116613868 Q6P158 DHX57 Q6P158.S1230.p_DHX57 Q6P158_S1230s _1_1_1230_1230 Q6P158 Q6P158 Putative ATP-dependent RNA helicase DHX57 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36230.36230.5 24.02 24.02 5.354 3 1 1 0 651.9612 3175.819 S1230s TMT10 1212 (K) LISAMLCAALYPNVVQVKsPEGK (F) LIS(0.0)AMLCAALY(0.0)PNVVQVKS(0.99)PEGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DHX57 157199 5 3 2406.1 84.87 HUMAN 1 -0.7193 -0.5384 PNWATQDSGFY____-p P60228;S442-p PNWATQDSGFY____ 0.254022601449777 0.0535109807374126 0.190666666666667 0.224 11.3375293212625 16.9554932058901 0.190666666666667 0.224 0.073493184816153 0.0201581503192707 2.21535073844265 3.2514045078224 P60228 EIF3E P60228.S442.p_EIF3E P60228_S442s _1_1_442_442 P60228 P60228|E5RGA2 Eukaryotic translation initiation factor 3 subunit E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23726.23726.2 12.77 12.77 1.786 4 1 1 0 941.3987 1801.8231 S442s TMT10 432 (R) SEAPNWATQDsGFY (-) S(0.0)EAPNWAT(0.0)QDS(0.99)GFY(0.0) s:Phosphorylated S EIF3E 52619.2 1 5 2988.1 63.95 HUMAN 1 11.3375 16.9555 PNWREKLSPIPAVPA-p Q07617;S581-p PNWREKLSPIPAVPA 0.171396449036957 0.0375057703303839 -0.238333333333333 -0.273666666666667 15.2617783185338 19.1576776667382 -0.238333333333333 -0.273666666666667 0.0297729705711383 0.0121403786788393 -2.92769363790058 -3.69719017783194 Q07617 SPAG1 Q07617.S581.p_SPAG1 Q07617_S581s _1_1_581_581 Q07617 Q07617 Sperm-associated antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25095.25095.4 16.05 16.05 6.135 2 1 1 0 776.7 3023.8013 S581s TMT10 578 (R) EKLsPIPAVPASVPLQAWHPAK (E) EKLS(0.99)PIPAVPAS(0.0)VPLQAWHPAK K:TMT10,s:Phosphorylated S SPAG1 104777.7 2 4 1758.1 117.12 HUMAN 1 -15.2618 -19.1577 PNYRNTRTPRTPRTP-p Q6PKG0;T782-p PNYRNTRTPRTPRTP 0.0241674379889842 0.00171039759294762 -0.794666666666667 -1.34866666666667 37.4228679730679 43.9190430023192 -0.794666666666667 -1.34866666666667 0.000181014432340927 4.05597901881596e-05 -9.04963662488809 -12.0427588860782 Q6PKG0 LARP1 Q6PKG0.T782.p_LARP1 Q6PKG0_T782tT785tT788t_3_3_782_788 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6911.6911.5 10.28 10.28 1.122 4 3 3 0 473.6413 2124.2766 T782t T785t T788t TMT10 779 (R) NTRtPRtPRtPQLK (D) NT(0.0)RT(0.99)PRT(0.99)PRT(0.99)PQLK K:TMT10,t:Phosphorylated T LARP1 123907.4 2 76 28.1 931.95 HUMAN 1 -37.4229 -43.919 PNYSPPGSPIEKYQY-p Q9UHF7-2;S1098-p PNYSPPGSPIEKYQY 0.0869018861060118 0.228486931227311 -0.364333333333333 -0.2 22.6468379698161 8.44482140575638 -0.364333333333333 -0.2 0.0054364600758576 0.143059880990257 -4.4714329311936 -1.7116767900969 Q9UHF7 TRPS1 Q9UHF7.2.S1098.p_TRPS1 Q9UHF7-2_S1098s _1_1_1098_1098 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10214.10214.3 17.78 13.91 3.007 3 1 1 0 654.3363 1881.0271 S1098s TMT10 1090 (K) HPNYSPPGsPIEK (Y) HPNY(0.0)S(0.0)PPGS(0.99)PIEK K:TMT10,s:Phosphorylated S TRPS1 145246 4 38 14.1 1150.14 HUMAN 1 -22.6468 -8.4448 PPAAKPGSPQAKSLQ-p P35658-3;S679-p PPAAKPGSPQAKSLQ 0.80807182605208 0.00844515777214221 -0.0353333333333333 -0.453 1.77728873328956 29.4379386069067 -0.0353333333333333 -0.453 0.664157569414975 0.00113816739254123 -0.458895972543842 -6.25325312470287 P35658 NUP214 P35658.3.S679.p_NUP214 P35658-3_S679s _1_1_679_679 P35658-3 P35658-5|P35658-3|P35658-4|P35658-2|A0A0A0MSW3 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12896.12896.2 15.47 11.14 4.747 2 1 1 0 1065.618 2050.2628 S679s TMT10 670 (R) ITPPAAKPGsPQAK (S) IT(0.0)PPAAKPGS(0.99)PQAK K:TMT10,s:Phosphorylated S NUP214 214428.5 8 13 111.1 572.27 HUMAN 1 -1.7773 -29.4379 PPAATPPSPKGGPAT-p E9PAV3;S949-p PPAATPPSPKGGPAT 0.463216602203082 0.900999536455881 0.154333333333333 0.0506666666666667 6.16639002284593 0.633385977076134 0.154333333333333 0.0506666666666667 0.241746946772264 0.864293809327222 1.314150917466 0.179190759021597 E9PAV3 NACA E9PAV3.S949.p_NACA E9PAV3_S949s _1_1_949_949 E9PAV3 E9PAV3 Nascent polypeptide-associated complex subunit alpha, muscle-specific form HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12197.12197.3 12.37 12.37 2.637 3 1 1 0 609.6657 1747.0154 S949s TMT10 938 (K) GAPTPPAATPPsPK (G) GAPT(0.0)PPAAT(0.0)PPS(0.99)PK K:TMT10,s:Phosphorylated S NACA 206102.3 1 3 533.1 279.72 HUMAN 1 6.1664 0.6334 PPACRSPSPVANTDA-p Q8NF91;S5883-p PPACRSPSPVANTDA 0.177181196874692 0.376435673786407 0.212 0.127666666666667 14.899077640256 5.63398845800288 0.212 0.127666666666667 0.0323662389430716 0.273275787320741 2.85954444434234 1.21880237021986 Q8NF91 SYNE1 Q8NF91.S5883.p_SYNE1 Q8NF91_S5883s _1_1_5883_5883 Q8NF91 Q8NF91|Q8NF91-4|A0A0C4DG40|E7ENN3|Q8NF91-2|Q8NF91-8 Nesprin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25781.25781.3 23.03 23.03 1.351 7 1 1 0 1026.1549 2996.4799 S5883s TMT10 5881 (R) SPsPVANTDASVNQDIAYYQALSAER (L) S(0.0)PS(0.99)PVANT(0.0)DAS(0.0)VNQDIAY(0.0)Y(0.0)QALS(0.0)AER s:Phosphorylated S SYNE1 1017743.3 1 3 1772.1 116.1 HUMAN 1 14.8991 5.634 PPAGFTKTPKSSSPA-p Q5T0Z8;T433-p PPAGFTKTPKSSSPA 0.0807170651382237 0.00957117496487321 0.932333333333333 -0.762 23.3377535552365 28.473455963341 0.932333333333333 -0.762 0.00463686705701602 0.00142119739792199 4.63472913408589 -5.97194599199243 Q5T0Z8 C6orf132 Q5T0Z8.T433.p_C6orf132 Q5T0Z8_T433t _1_1_433_433 Q5T0Z8 Q5T0Z8 Uncharacterized protein C6orf132 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9873.9873.4 8.41 8.41 1.396 2 1 1 0 523.2999 2010.2103 T433t TMT10 423 (K) AAHPPAGFTKtPK (S) AAHPPAGFT(0.0)KT(0.99)PK K:TMT10,t:Phosphorylated T C6orf132 124488.2 1 6 336.1 355.09 HUMAN 1 23.3378 -28.4735 PPAGGGGSIHDLPLF-p Q9NRG9;S511-p PPAGGGGSIHDLPLF 0.107015162488299 0.237676013695445 0.310666666666667 0.119666666666667 20.4246324452618 8.21907883991841 0.310666666666667 0.119666666666667 0.00906852710644514 0.150692665889139 3.97067951504093 1.67259952010277 Q9NRG9 AAAS Q9NRG9.S511.p_AAAS Q9NRG9_S511sS541s_2_2_511_541 Q9NRG9 Q9NRG9|Q9NRG9-2|F8VZ44 Aladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31826.31826.5 17.83 17.83 2.576 8 2 2 0 1017.6885 4924.4896 S511s S541s TMT10 501 (R) AQEPPAGGGGsIHDLPLFTETSPTSAPWDPLPGPPPVLPHsPHSHL (-) AQEPPAGGGGS(0.99)IHDLPLFT(0.0)ET(0.0)S(0.0)PT(0.0)S(0.0)APWDPLPGPPPVLPHS(0.99)PHS(0.0)HL s:Phosphorylated S AAAS 60428.8 4 3 3084.1 61.16 HUMAN 1 20.4246 8.2191 PPAKKAKSPSQKKPV-p O75367;S138-p PPAKKAKSPSQKKPV 0.0371932005736469 0.0015943747220345 0.565666666666667 -1.25166666666667 32.6395672607868 44.774415800323 0.565666666666667 -1.25166666666667 0.000544556910816905 3.33087565217579e-05 7.27719041607906 -12.5023461568759 O75367 H2AFY O75367.S138.p_H2AFY O75367_S138s _1_1_138_138 O75367 O75367|O75367-3|O75367-2|D6RCF2 Core histone macro-H2A.1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7203.7203.3 8.63 4.17 4.17 3 1 1 0 694.754 2002.2831 S138s TMT10 138 (K) sPSQKKPVSK (K) S(0.99)PS(0.0)QKKPVS(0.0)K K:TMT10,s:Phosphorylated S H2AFY 39787.5 5 2 1399.1 146.47 HUMAN 1 32.6396 -44.7744 PPAKKPATPAEDDED-p E9PRY8;T563-p PPAKKPATPAEDDED 0.335688453643781 0.108320782642705 0.146333333333333 0.177 8.84274206118228 12.7525960017459 0.146333333333333 0.177 0.130534645443623 0.0530567202087719 1.78114115420319 2.46525823445746 E9PRY8 NotFound E9PRY8.T563.p_NotFound E9PRY8_T563tS578s_2_2_563_578 E9PRY8 E9PRY8|P29692-2|A0A087X1X7|P29692-4 Elongation factor 1-delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22471.22471.5 27.38 27.38 99 2 2 2 0 885.8012 4265.046 T563t S578s TMT10 560 (K) KPAtPAEDDEDDDIDLFGsDNEEEDKEAAQLR (E) KPAT(1.0)PAEDDEDDDIDLFGS(1.0)DNEEEDKEAAQLR K:TMT10,t:Phosphorylated T,s:Phosphorylated S EEF1D 77196.2 22 9 369.1 339.47 HUMAN 1 8.8427 12.7526 PPALDALSPFLRKKA-p Q9HCH0;S177-p PPALDALSPFLRKKA 0.727230050421967 0.72402612350121 0.048 -0.0413333333333333 2.62256093032798 1.93039963634859 0.048 -0.0413333333333333 0.546693495794077 0.641150575406272 0.642649200209375 -0.493276224418397 Q9HCH0 NCKAP5L Q9HCH0.S177.p_NCKAP5L Q9HCH0_S177s _1_1_177_177 Q9HCH0 Q9HCH0 Nck-associated protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34440.34440.4 16.73 13.27 99 1 1 1 0 908.9683 3552.8623 S177s TMT10 151 (R) EVCWEQQLRPGGPGPPAAPPPALDALsPFLR (K) EVCWEQQLRPGGPGPPAAPPPALDALS(1.0)PFLR C:Carbamidomethylation,s:Phosphorylated S NCKAP5L 140323.1 1 2 609.1 261.98 HUMAN 1 2.6226 -1.9304 PPALRSQSRDRLDRG-p Q99501;S405-p PPALRSQSRDRLDRG 0.283800433388815 0.00421471655656868 0.247333333333333 -0.589 10.3202291892161 34.9418230884525 0.247333333333333 -0.589 0.0928917363946579 0.000320492367400357 2.03740428680767 -8.07282092158057 Q99501 GAS2L1 Q99501.S405.p_GAS2L1 Q99501_S405s _1_1_405_405 Q99501 Q99501|A0A5E8 GAS2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3467.3470.3 8.15 2.22 2.154 2 1 1 0 481.2426 1361.7447 S405s TMT10 403 (R) SQsRDRLDR (G) S(0.0)QS(0.99)RDRLDR s:Phosphorylated S GAS2L1 73400.1 1 8 1084.1 179.86 HUMAN 1 10.3202 -34.9418 PPALTPDSQTVDSSC-p Q9H7N4;S992-p PPALTPDSQTVDSSC 0.972247636963192 0.00719958759675422 -0.00733333333333334 0.521333333333333 0.237289001888717 30.6584893031971 -0.00733333333333335 0.521333333333333 0.946828015747657 0.000859312382017191 -0.0698418096668963 6.62419489030273 Q9H7N4 SCAF1 Q9H7N4.S992.p_SCAF1 Q9H7N4_T989tS992s_2_2_989_992 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17222.17261.3 15.48 15.48 1.3 5 2 2 0 886.4185 2497.3009 T989t S992s TMT10 981 (K) AAPPPPALtPDsQTVDSSCK (T) AAPPPPALT(0.99)PDS(0.99)QT(0.0)VDS(0.0)S(0.0)CK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S SCAF1 139895 1 33 76.1 647.25 HUMAN 1 -0.2373 30.6585 PPAPEGGSRDEQDGA-p P46379-3;S1026-p PPAPEGGSRDEQDGA 0.267502932725385 0.38545006144589 0.164666666666667 0.155333333333333 10.8516967960516 5.50391484155653 0.164666666666667 0.155333333333333 0.082192146107034 0.281584351351332 2.13014762261746 1.19539148522277 P46379 BAG6 P46379.3.S1026.p_BAG6 P46379-3_S1026s _1_1_1026_1026 P46379-3 P46379-3|A0A0G2JK23|P46379-2|A0A024RCR6|P46379-5|A0A0G2JL47 Isoform 3 of Large proline-rich protein BAG6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33784.33784.5 21.96 21.96 2.406 4 1 1 0 995.4789 4893.3917 S1026s TMT10 1017 (R) GPPPAPEGGsRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQR (K) GPPPAPEGGS(0.99)RDEQDGAS(0.0)AET(0.0)EPWAAAVPPEWVPIIQQDIQS(0.0)QR s:Phosphorylated S BAG6 122796.4 1 7 590.1 264.42 HUMAN 1 10.8517 5.5039 PPAPHRHTPQPPPPQ-p Q9HCM7;T298-p PPAPHRHTPQPPPPQ 0.19433017940189 0.828394996287275 0.223666666666667 -0.038 13.8792752289887 1.14329714408357 0.223666666666667 -0.038 0.0409328964768794 0.768546741530326 2.6707798763609 -0.309415486707572 Q9HCM7 FBRSL1 Q9HCM7.T298.p_FBRSL1 Q9HCM7_T298t _1_1_298_298 Q9HCM7 Q9HCM7 Fibrosin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3925.3925.5 9.96 9.96 99 1 1 1 0 541.2947 2622.4781 T298t TMT10 289 (K) KEPPAPHRHtPQPPPPQPR (G) KEPPAPHRHT(1.0)PQPPPPQPR K:TMT10,t:Phosphorylated T FBRSL1 111247 1 4 716.1 237.81 HUMAN 1 13.8793 -1.1433 PPAPQPPSPTPSPPR-p Q96B36-3;S108-p PPAPQPPSPTPSPPR 0.0995388440058061 0.62840422164578 0.312333333333333 0.0473333333333334 21.2033689663255 2.74337863069818 0.313378525280794 0.0473333333333334 0.00757989349429317 0.531694462119953 4.1420986106041 0.667700364825458 Q96B36 AKT1S1 Q96B36.3.S108.p_AKT1S1 Q96B36-3_S108s _1_1_108_108 Q96B36-3 Q96B36-3 Isoform 3 of Proline-rich AKT1 substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14264.14933.4 13.75 13.75 1.83 5 1 1 0 819.192 3193.7796 S108s TMT10 91 (R) AATAARPPAPPPAPQPPsPTPSPPRPTLAR (E) AAT(0.0)AARPPAPPPAPQPPS(0.99)PT(0.0)PS(0.0)PPRPT(0.0)LAR s:Phosphorylated S AKT1S1 29490.1 3 2 1393.1 146.92 HUMAN 1 21.2034 2.7434 PPAPRGRTPPNLLST-p Q5VWQ8;T935-p PPAPRGRTPPNLLST 0.95578545369103 0.965037414336525 -0.012 -0.00499999999999999 0.384185194822191 0.221217424961754 -0.012 -0.00499999999999998 0.915337975062378 0.9503383551311 -0.111369206647243 -0.0652169519978694 Q5VWQ8 DAB2IP Q5VWQ8.T935.p_DAB2IP Q5VWQ8_T935t _1_1_935_935 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25140.25140.5 25.8 25.8 3.492 11 1 1 0 775.9991 3795.998 T935t TMT10 933 (R) GRtPPNLLSTLQYPRPSSGTLASASPDWVGPSTR (L) GRT(0.99)PPNLLS(0.0)T(0.0)LQY(0.0)PRPS(0.0)S(0.0)GT(0.0)LAS(0.0)AS(0.0)PDWVGPS(0.0)T(0.0)R t:Phosphorylated T DAB2IP 132592.9 3 16 281.1 388.28 HUMAN 1 -0.3842 -0.2212 PPAPVMHSPSRKMTV-p Q13573;S232-p PPAPVMHSPSRKMTV 0.714570848433642 0.479683923311401 -0.064 0.0863333333333334 2.75087997097795 4.25715097808691 -0.064 0.0863333333333334 0.530776886894258 0.375219069564322 -0.669342507812027 0.965804635358478 Q13573 SNW1 Q13573.S232.p_SNW1 Q13573_S232s _1_1_232_232 Q13573 G3V3A4|Q13573|G3V4X8 SNW domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9652.9652.5 12.72 12.72 1.393 3 1 1 0 436.8352 2100.1788 S232s TMT10 221 (R) GPPSPPAPVMHsPSRK (M) GPPS(0.0)PPAPVMHS(0.99)PS(0.0)RK K:TMT10,s:Phosphorylated S SNW1 61550.4 3 5 936.1 198.57 HUMAN 1 -2.7509 4.2572 PPAQGLRSAAEEKAA-p P41440;S474-p PPAQGLRSAAEEKAA 0.559997723993319 0.0286113715981068 0.0936666666666667 -0.632666666666667 4.64784363546369 20.8978145765713 0.0936666666666667 -0.632666666666667 0.342938020306661 0.008132396454417 1.03910940050786 -4.070306597641 P41440 SLC19A1 P41440.S474.p_SLC19A1 P41440_S474s _1_1_474_474 P41440 P41440|P41440-2 Folate transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10004.10004.3 11.4 6 99 1 1 1 0 674.0263 1940.0965 S474s TMT10 466 (R) QPPAQGLRsAAEEK (A) QPPAQGLRS(1.0)AAEEK K:TMT10,s:Phosphorylated S SLC19A1 65494.7 1 2 5179.1 22.11 HUMAN 1 4.6478 -20.8978 PPAQLSPSVPKRPKL-p P18887;S268-p PPAQLSPSVPKRPKL 0.198300279868763 0.0481854795612809 -0.283666666666667 -0.292 13.6875936166504 17.6112344287271 -0.283666666666667 -0.292 0.0427799860221472 0.0173331125529274 -2.63573709663422 -3.38131640003522 P18887 XRCC1 P18887.S268.p_XRCC1 P18887_S268s _1_1_268_268 P18887 P18887|F5H8D7 DNA repair protein XRCC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14817.14817.3 15.14 15.14 1.132 4 1 1 0 767.7792 2221.3523 S268s TMT10 257 (K) TPSKPPAQLSPsVPK (R) T(0.0)PS(0.0)KPPAQLS(0.0)PS(0.99)VPK K:TMT10,s:Phosphorylated S XRCC1 69817.6 2 7 433.1 315.31 HUMAN 1 -13.6876 -17.6112 PPARSQSSDTEQQSP-p P23588;S498-p PPARSQSSDTEQQSP 0.123350251698765 0.0733704982323242 0.309 -0.213666666666667 18.9135514188452 15.0670639558943 0.309 -0.213666666666667 0.0128423605358553 0.0311382072151008 3.64956859985805 -2.88914292774386 P23588 EIF4B P23588.S498.p_EIF4B P23588_S498sS504s_2_2_498_504 P23588 E7EX17|P23588|P23588-2 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6379.6379.2 15.22 15.22 1.123 7 2 2 0 1149.9984 2139.0566 S498s S504s TMT10 495 (R) SQSsDTEQQsPTSGGGK (V) S(0.0)QS(0.0)S(0.99)DT(0.0)EQQS(0.99)PT(0.0)S(0.0)GGGK K:TMT10,s:Phosphorylated S EIF4B 69207 6 27 146.1 516.36 HUMAN 1 18.9136 -15.0671 PPATRNHSGSRTPPV-p Q9UQ35;S2100-p PPATRNHSGSRTPPV 0.0623419636634116 0.141719256985112 0.432666666666667 0.179 26.2127851659345 11.181451711182 0.432666666666667 0.179 0.00239178139554201 0.0761824313320026 5.35764249747749 2.18692431740278 Q9UQ35 SRRM2 Q9UQ35.S2100.p_SRRM2 Q9UQ35_S2100sT2104t_2_2_2100_2104 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5277.5277.3 8.29 8.29 8.287 5 2 2 0 613.9348 1679.8572 S2100s T2104t Hydrogen 2098 (R) NHsGSRtPPVALNSSR (M) NHS(0.99)GS(0.0)RT(0.99)PPVALNS(0.0)S(0.0)R s:Phosphorylated S,t:Phosphorylated T SRRM2 300351.7 2 237 2.1 3310.34 HUMAN 1 26.2128 11.1815 PPAVTPPSPEKGPAT-p E9PAV3;S1623-p PPAVTPPSPEKGPAT 0.283177951218012 0.00524033574345604 0.252333333333333 -0.591 10.3559385242096 33.1698431101037 0.252333333333333 -0.591 0.0921310769028555 0.000481965208416407 2.04362272178249 -7.44414412574099 E9PAV3 NACA E9PAV3.S1623.p_NACA E9PAV3_S1623s _1_1_1623_1623 E9PAV3 E9PAV3 Nascent polypeptide-associated complex subunit alpha, muscle-specific form HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16588.16588.4 20.35 20.35 3.956 4 1 1 0 751.9125 2924.67 S1623s TMT10 1612 (K) EAPTPPAVTPPsPEKGPATPAPK (G) EAPT(0.0)PPAVT(0.0)PPS(0.99)PEKGPAT(0.0)PAPK K:TMT10,s:Phosphorylated S NACA 206102.3 1 11 533.1 279.72 HUMAN 1 10.3559 -33.1698 PPAVTPPSPKGSPAA-p E9PAV3;S1018-p PPAVTPPSPKGSPAA 0.165068505666097 0.00715491515092061 -0.318 -0.534 15.6630875969006 30.6991705416533 -0.318 -0.534 0.0271450871501504 0.000851300612446711 -3.00376361329178 -6.63685667949229 E9PAV3 NACA E9PAV3.S1018.p_NACA E9PAV3_S1018s _1_1_1018_1018 E9PAV3 E9PAV3 Nascent polypeptide-associated complex subunit alpha, muscle-specific form HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15456.15456.3 14.01 14.01 2.632 3 1 1 0 619.0088 1775.0467 S1018s TMT10 1007 (K) GAPTPPAVTPPsPK (G) GAPT(0.0)PPAVT(0.0)PPS(0.99)PK K:TMT10,s:Phosphorylated S NACA 206102.3 1 4 533.1 279.72 HUMAN 1 -15.6631 -30.6992 PPCKKPLSPVRDNIQ-p Q9UQ84;S815-p PPCKKPLSPVRDNIQ 0.185218061272109 0.000952253650599092 -0.235 -2.322 14.4027012714177 62.1912325451199 -0.235 -2.322 0.0362852293803716 6.03777250658516e-07 -2.76715978247005 -26.4957224654288 Q9UQ84 EXO1 Q9UQ84.S815.p_EXO1 Q9UQ84_S815s _1_1_815_815 Q9UQ84 Q9UQ84 Exonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21806.21806.5 21.29 21.29 8.256 2 1 1 0 804.8214 3940.1205 S815s TMT10 812 (K) KPLsPVRDNIQLTPEAEEDIFNKPECGR (V) KPLS(0.99)PVRDNIQLT(0.0)PEAEEDIFNKPECGR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S EXO1 95242.6 3 9 1477.1 139.01 HUMAN 1 -14.4027 -62.1912 PPCLLPLSPPTAPDR-p J3KR25;S78-p PPCLLPLSPPTAPDR 0.971613932574011 0.638864791643498 -0.00566666666666668 -0.0783333333333333 0.243402361832429 2.65058376312525 -0.00566666666666668 -0.0783333333333332 0.945496147935079 0.543177314631348 -0.0715947285607481 -0.64841713181825 J3KR25 TRIB3 J3KR25.S78.p_TRIB3 J3KR25_S78s _1_1_78_78 J3KR25 J3KR25|Q96RU7 Tribbles homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30634.30634.3 13.2 13.2 5.552 2 1 1 0 685.0295 1973.1091 S78s TMT10 70 (R) LPPCLLPLsPPTAPDR (A) LPPCLLPLS(0.99)PPT(0.0)APDR C:Carbamidomethylation,s:Phosphorylated S TRIB3 43270 1 1 6204.1 13.2 HUMAN 1 -0.2434 -2.6506 PPCPGHWTPEAPGSG-p O60936-3;T176-p PPCPGHWTPEAPGSG 0.188778224113783 0.812643386194471 0.207333333333333 -0.028 14.1942314854462 1.26279235076932 0.207333333333333 -0.028 0.0380694718242227 0.747688610173341 2.72864991126591 -0.338522767591821 O60936 NOL3 O60936.3.T176.p_NOL3 O60936-3_T176t _1_1_176_176 O60936-3 O60936-3 Isoform 3 of Nucleolar protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18032.18032.3 17.06 12.16 4.681 6 1 1 0 1035.1263 3023.3977 T176t TMT10 166 (R) SYDPPCPGHWtPEAPGSGTTCPGLPR (A) S(0.0)Y(0.0)DPPCPGHWT(0.99)PEAPGS(0.0)GT(0.0)T(0.0)CPGLPR C:Carbamidomethylation,t:Phosphorylated T NOL3 29639.6 2 1 3779.1 43.31 HUMAN 1 14.1942 -1.2628 PPCPPCQSPVPQRRS-p A7MCY6;S365-p PPCPPCQSPVPQRRS 0.70004138781017 0.200501267663209 -0.0626666666666667 -0.146666666666667 2.91028443255597 9.18226343495008 -0.0626666666666667 -0.146666666666667 0.511648325050859 0.120718451654788 -0.702130395331281 -1.8392419114147 A7MCY6 TBKBP1 A7MCY6.S365.p_TBKBP1 A7MCY6_S365s _1_1_365_365 A7MCY6 A7MCY6 TANK-binding kinase 1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7481.7481.3 10.67 10.67 99 1 1 1 0 709.6779 2047.0527 S365s TMT10 356 (R) AAPPCPPCQsPVPQRR (S) AAPPCPPCQS(1.0)PVPQRR C:Carbamidomethylation,s:Phosphorylated S TBKBP1 68613.7 4 2 2261.1 90.94 HUMAN 1 -2.9103 -9.1823 PPDADPNTPSPKPLE-p F5GWX5;T522-p PPDADPNTPSPKPLE 0.605226781364966 0.00618650355766278 -0.0796666666666667 0.492 4.02944464362346 31.8315706166607 -0.0796666666666667 0.492 0.395417181017449 0.000655908015680589 -0.922753803406581 6.99733460823409 F5GWX5 CHD4 F5GWX5.T522.p_CHD4 F5GWX5_T522tS524s_2_2_522_524 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17617.17818.5 11.53 11.53 1.697 4 2 2 0 818.4108 3928.087 T522t S524s TMT10 503 (K) WGQPPSPTPVPRPPDADPNtPsPKPLEGRPER (Q) WGQPPS(0.0)PT(0.0)PVPRPPDADPNT(0.99)PS(0.99)PKPLEGRPER K:TMT10,t:Phosphorylated T,s:Phosphorylated S CHD4 218583 10 30 49.1 753.68 HUMAN 1 -4.0294 31.8316 PPDDAVPSDDDLGTV-p P51610;S1838-p PPDDAVPSDDDLGTV 0.596900561287598 0.773885044250832 0.0733333333333333 0.0406666666666667 4.1380037504455 1.53941552174983 0.0733333333333333 0.0406666666666667 0.385655584849889 0.70154970739173 0.943418910746843 0.404157791807607 P51610 HCFC1 P51610.S1838.p_HCFC1 P51610_S1838s _1_1_1838_1838 P51610 A6NEM2|P51610-4|P51610-2 Host cell factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.29985.29985.3 25.79 25.79 2.213 6 1 1 0 1391.3334 4092.0312 S1838s TMT10 1820 (K) GTNVMVTHYFLPPDDAVPsDDDLGTVPDYNQLK (K) GT(0.0)NVMVT(0.0)HY(0.0)FLPPDDAVPS(0.99)DDDLGT(0.0)VPDY(0.0)NQLK K:TMT10,s:Phosphorylated S HCFC1 210725.7 10 14 625.1 258.74 HUMAN 1 4.138 1.5394 PPDGLLASPDLGLLK-p P17535;S90-p PPDGLLASPDLGLLK 0.512156146242886 0.0205344648135939 -0.0876666666666667 -0.356 5.37266467780647 23.0959826416428 -0.0876666666666667 -0.356 0.290224139507588 0.00490232089545529 -1.17193360665596 -4.57200610530278 P17535 JUND P17535.S90.p_JUND P17535_S90s _1_1_90_90 P17535 P17535 Transcription factor jun-D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.34014.34014.5 30.04 26.47 9.124 6 1 1 0 1119.4226 5513.1238 S90s TMT10 48 (K) DALTLSLSEQVAAALKPAAAPPPTPLRADGAPSAAPPDGLLAsPDLGLLK (L) DALT(0.0)LS(0.0)LS(0.0)EQVAAALKPAAAPPPT(0.0)PLRADGAPS(0.0)AAPPDGLLAS(0.99)PDLGLLK K:TMT10,s:Phosphorylated S JUND 35287.4 4 4 1749.1 117.66 HUMAN 1 -5.3727 -23.096 PPDHKPKSWVAAEKM-p Q9NZM1;S1007-p PPDHKPKSWVAAEKM 0.125743941781331 0.965986453315642 -0.353333333333333 -0.00466666666666663 18.7251180840682 0.214256678203409 -0.353333333333333 -0.00466666666666663 0.0134118346831684 0.951862751353356 -3.61053098992682 -0.0632118657547172 Q9NZM1 MYOF Q9NZM1.S1007.p_MYOF Q9NZM1_S1007s _1_1_1007_1007 Q9NZM1 Q9NZM1|Q9NZM1-3|Q9NZM1-6|Q9NZM1-2|Q9NZM1-5 Myoferlin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15478.15478.2 9.98 2.81 99 1 1 1 0 664.8549 1248.7352 S1007s TMT10 1007 (K) sWVAAEK (M) S(1.0)WVAAEK K:TMT10,s:Phosphorylated S MYOF 236244.8 1 9 829.1 216.58 HUMAN 1 -18.7251 -0.2143 PPDILLDSPERKQKK-p Q6KC79;S318-p PPDILLDSPERKQKK 0.977858515477068 0.624773479482985 -0.00433333333333335 -0.0473333333333333 0.192058493928416 2.77859509303529 -0.00433333333333335 -0.0473333333333333 0.956740482457236 0.527400443540425 -0.056803203726233 -0.674981359829586 Q6KC79 NIPBL Q6KC79.S318.p_NIPBL Q6KC79_S318s _1_1_318_318 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20982.21603.4 15.57 15.57 99 1 1 1 0 533.7906 2052.1741 S318s TMT10 309 (R) DVPPDILLDsPERK (Q) DVPPDILLDS(1.0)PERK K:TMT10,s:Phosphorylated S NIPBL 318099.5 17 6 50.1 752.87 HUMAN 1 -0.1921 -2.7786 PPDLHKSSPHGEKRA-p Q96QZ7;S1283-p PPDLHKSSPHGEKRA 0.998250411735214 0.0734114957947127 0.000333333333333334 0.517333333333333 0.0108591103220634 15.0611606029788 0.00033333333333333 0.517333333333333 0.997502720847596 0.0311805620741953 0.00327704633560341 2.88803578773037 Q96QZ7 MAGI1 Q96QZ7.S1283.p_MAGI1 Q96QZ7_S1283s _1_1_1283_1283 Q96QZ7 Q96QZ7 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5255.5255.3 7.23 7.23 1.567 2 1 1 0 427.2193 1199.6785 S1283s TMT10 1282 (K) SsPHGEK (R) S(0.0)S(0.99)PHGEK K:TMT10,s:Phosphorylated S MAGI1 165548 1 7 1223.1 164.72 HUMAN 1 0.0109 15.0612 PPDSLTASNQSKGTS-p Q8WYN0;S207-p PPDSLTASNQSKGTS 0.886850934347846 0.459015657545431 -0.024 -0.0766666666666667 1.01755020823534 4.50840619230781 -0.024 -0.0766666666666667 0.79112476408743 0.354127277624041 -0.278274937155322 -1.01295936510323 Q8WYN0 ATG4A Q8WYN0.S207.p_ATG4A Q8WYN0_S207s_1_1_207_207 Q8WYN0 Q8WYN0|Q8WYN0-5|Q8WYN0-3|G5E979 Cysteine protease ATG4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20792.20792.4 11.84 11.84 1.166 6 1 1 0 745.6387 2898.5573 S207s N208n TMT10 188 (R) VLPLSADTAGDRPPDSLTAsnQSK (G) VLPLS(0.0)ADT(0.0)AGDRPPDS(0.0)LT(0.0)AS(0.99)N(1.0)QS(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated ATG4A 46061.7 1 1 6408.1 11.84 HUMAN 1 -1.0176 -4.5084 PPDTQQPSPSKAFKP-p Q68CZ2;S660-p PPDTQQPSPSKAFKP 0.595485035934376 0.0377334978748439 0.0846666666666667 -0.506333333333333 4.15447292269938 19.1216908860251 0.0846666666666667 -0.506333333333333 0.384195883911555 0.0122413949890283 0.94654444463717 -3.68967889732838 Q68CZ2 TNS3 Q68CZ2.S660.p_TNS3 Q68CZ2_S660s _1_1_660_660 Q68CZ2 Q68CZ2|Q68CZ2-2 Tensin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7555.7760.3 18.54 18.54 1.549 4 1 1 0 771.0543 2231.1821 S660s TMT10 646 (R) GVGSGPHPPDTQQPsPSK (A) GVGS(0.0)GPHPPDT(0.0)QQPS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S TNS3 156460.9 4 6 183.1 477.16 HUMAN 1 4.1545 -19.1217 PPEALDFSDDEKEKE-p Q96HR8;S315-p PPEALDFSDDEKEKE 0.68011315114893 0.00792195598687765 -0.102666666666667 -0.716333333333333 3.13818020179232 29.9674992230785 -0.102666666666667 -0.716333333333333 0.485491890311248 0.00100751165241575 -0.748341195296769 -6.41209214588788 Q96HR8 NAF1 Q96HR8.S315.p_NAF1 Q96HR8_S315s _1_1_315_315 Q96HR8 Q96HR8|Q96HR8-2 H/ACA ribonucleoprotein complex non-core subunit NAF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19035.19035.5 24.28 17.91 10.393 3 1 1 0 786.9894 3850.9429 S315s TMT10 296 (K) GSDASWKNDQEPPPEALDFsDDEKEK (E) GS(0.0)DAS(0.0)WKNDQEPPPEALDFS(0.99)DDEKEK K:TMT10,s:Phosphorylated S NAF1 53943.8 14 1 1636.1 125 HUMAN 1 -3.1382 -29.9675 PPEARPLSRKSSPSS-p Q8WVR3;S491-p PPEARPLSRKSSPSS 0.959344047178047 0.330199676253647 -0.008 -0.129 0.349353351276301 6.37166727842987 -0.00799999999999999 -0.129 0.922708804919673 0.230586178680083 -0.101631694499152 -1.35017345302887 Q8WVR3 C7orf43 Q8WVR3.S491.p_C7orf43 Q8WVR3_S491s _1_1_491_491 Q8WVR3 Q8WVR3|B3KNS5|Q8WVR3-3 Uncharacterized protein C7orf43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15368.15368.4 15.44 10.36 1.368 4 1 1 0 600.5667 2319.2771 S491s TMT10 474 (K) LQFTASVSHPPPEARPLsR (K) LQFT(0.0)AS(0.0)VS(0.0)HPPPEARPLS(0.99)R s:Phosphorylated S C7orf43 63337.5 1 1 2386.1 85.59 HUMAN 1 -0.3494 -6.3717 PPEDFRHSPEDFRRP-p Q8IXT5;S575-p PPEDFRHSPEDFRRP 0.39408571775517 0.516107771774227 0.114 0.064 7.46181897645314 3.85654296776708 0.114 0.064 0.179398208731756 0.411477131135296 1.54163426767377 0.889459685808486 Q8IXT5 RBM12B Q8IXT5.S575.p_RBM12B Q8IXT5_S575s _1_1_575_575 Q8IXT5 Q8IXT5|B9ZVT1 RNA-binding protein 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14201.14429.5 17.33 17.33 7.69 3 1 1 0 589.4672 2863.3386 S575s TMT10 560 (R) HSSEDFRFPPEDFRHsPEDFR (R) HS(0.0)S(0.0)EDFRFPPEDFRHS(0.99)PEDFR s:Phosphorylated S RBM12B 118442.9 13 7 384.1 333.8 HUMAN 1 7.4618 3.8565 PPEEENESEPEEPSG-p O60341-2;S166-p PPEEENESEPEEPSG 0.784610264714199 0.0959984205797896 0.067 0.223333333333333 2.02789464451882 13.4581613653581 0.067 0.223333333333333 0.626917705685837 0.0451007603281553 0.514970685173212 2.59247946808118 O60341 KDM1A O60341.2.S166.p_KDM1A O60341-2_S166s _1_1_166_166 O60341-2 O60341-2 Isoform 2 of Lysine-specific histone demethylase 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18980.19395.5 32.37 32.37 1.124 7 1 1 0 1175.3425 5792.7112 S166s TMT10 150 (K) KLPPPPPQAPPEEENEsEPEEPSGQAGGLQDDSSGGYGDGQASGVEGAAFQSR (L) KLPPPPPQAPPEEENES(0.99)EPEEPS(0.0)GQAGGLQDDS(0.0)S(0.0)GGY(0.0)GDGQAS(0.0)GVEGAAFQS(0.0)R K:TMT10,s:Phosphorylated S KDM1A 95666.6 5 14 232.2 420.78 HUMAN 1 2.0279 13.4582 PPEELQVSPGPRQQL-p P51610;S1507-p PPEELQVSPGPRQQL 0.338038342621858 0.337666410294635 0.182 -0.122333333333333 8.76889045434933 6.24669616211902 0.182 -0.122333333333333 0.132773362687936 0.237317838322685 1.76835755010234 -1.32806564751618 P51610 HCFC1 P51610.S1507.p_HCFC1 P51610_S1507s _1_1_1507_1507 P51610 P51610|P51610-2 Host cell factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23150.23150.3 22.35 22.35 3.689 7 1 1 0 1078.563 3153.6993 S1507s TMT10 1483 (R) AVTTVTQSTPVPGPSVPPPEELQVsPGPR (Q) AVT(0.0)T(0.0)VT(0.0)QS(0.0)T(0.0)PVPGPS(0.0)VPPPEELQVS(0.99)PGPR s:Phosphorylated S HCFC1 210725.7 5 13 625.1 258.74 HUMAN 1 8.7689 -6.2467 PPEENPGSPSRESPL-p Q9P2J3;S603-p PPEENPGSPSRESPL 0.910143139572536 0.935690488884895 -0.0176666666666667 -0.0116666666666666 0.801072136109941 0.407589756110867 -0.0176666666666667 -0.0116666666666666 0.83155846020282 0.910418395693905 -0.223207094924685 -0.117864379550165 Q9P2J3 KLHL9 Q9P2J3.S603.p_KLHL9 Q9P2J3_S603s _1_1_603_603 Q9P2J3 Q9P2J3 Kelch-like protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21983.21983.3 16.52 16.52 1.188 8 1 1 0 1125.8546 3295.5739 S603s TMT10 589 (R) ACTLTVFPPEENPGsPSRESPLSAPSDHS (-) ACT(0.0)LT(0.0)VFPPEENPGS(0.99)PS(0.0)RES(0.0)PLS(0.0)APS(0.0)DHS(0.0) C:Carbamidomethylation,s:Phosphorylated S KLHL9 70283.3 3 1 4716.1 27.54 HUMAN 1 -0.8011 -0.4076 PPEGQCYSN______-p Q13404;S146-p PPEGQCYSN______ 0.433057255017301 0.441019141705052 0.104666666666667 0.0976666666666667 6.69501275641134 4.73447622850772 0.104666666666667 0.0976666666666667 0.21404186397701 0.336164909046141 1.40751392945664 1.0549631812031 Q13404 UBE2V1 Q13404.S146.p_UBE2V1 Q13404_S146s _1_1_146_146 Q13404 I3L0A0|Q13404-1|Q13404-2|Q13404-7|Q13404-8|G3V2F7|Q13404-6|A0A0A0MSL3 Ubiquitin-conjugating enzyme E2 variant 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16362.16775.3 17.45 17.45 3.046 2 1 1 0 810.7134 2350.1572 S146s TMT10 132 (K) ENMKLPQPPEGQCYsN (-) ENMKLPQPPEGQCY(0.0)S(0.99)N K:TMT10,C:Carbamidomethylation,s:Phosphorylated S UBE2V1 16608.8 11 2 3965.1 40.1 HUMAN 1 6.695 4.7345 PPEHFPFSDPEDDFQ-p P61129;S409-p PPEHFPFSDPEDDFQ 0.16541735067902 0.135536221268764 0.233666666666667 0.258333333333333 15.6414928041246 11.4398840511321 0.233666666666667 0.258333333333333 0.0272803991014571 0.0717813455352402 2.99965189092461 2.23230771420045 P61129 ZC3H6 P61129.S409.p_ZC3H6 P61129_S409s _1_1_409_409 P61129 P61129 Zinc finger CCCH domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34055.34055.5 23.08 23.08 3.634 5 1 1 0 1064.3438 5237.7079 S409s TMT10 385 (R) GITPLPKPPPGVGLLPTPPEHFPFsDPEDDFQTDFSDDFRK (I) GIT(0.0)PLPKPPPGVGLLPT(0.0)PPEHFPFS(0.99)DPEDDFQT(0.0)DFS(0.0)DDFRK K:TMT10,s:Phosphorylated S ZC3H6 132352.1 1 3 2209.1 93.4 HUMAN 1 15.6415 11.4399 PPEIKERSPPLSPEE-p Q8N157;S1123-p PPEIKERSPPLSPEE 0.477012503754082 0.238624824466293 -0.215 0.116 5.91535797751632 8.19750231800408 -0.215 0.116 0.256132213234132 0.151443196683631 -1.26947061487511 1.66886288483048 Q8N157 AHI1 Q8N157.S1123.p_AHI1 Q8N157_S1123s _1_1_1123_1123 Q8N157 Q8N157 Jouberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9320.9320.3 11.63 11.63 4.314 2 1 1 0 602.9839 1726.974 S1123s TMT10 1121 (K) ERsPPLSPEEK (T) ERS(0.99)PPLS(0.0)PEEK K:TMT10,s:Phosphorylated S AHI1 138253.7 1 2 5771.1 16.42 HUMAN 1 -5.9154 8.1975 PPEKGRNSGAWETKS-p Q8WV28-2;S206-p PPEKGRNSGAWETKS 0.038468445318532 0.0376197929671474 -0.776 -0.354666666666667 32.2631137082478 19.1394912154965 -0.776 -0.354666666666667 0.000593866228910427 0.0121913241431261 -7.15134553312391 -3.69339324657064 Q8WV28 BLNK Q8WV28.2.S206.p_BLNK Q8WV28-2_S206s _1_1_206_206 Q8WV28-2 Q8WV28-2 Isoform 2 of B-cell linker protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7322.7322.3 11.53 11.53 11.525 2 1 1 0 548.6152 1563.8644 S206s TMT10 203 (K) GRNsGAWETK (S) GRNS(0.99)GAWET(0.0)K K:TMT10,s:Phosphorylated S BLNK 48399.2 1 11 1637.2 124.96 HUMAN 1 -32.2631 -19.1395 PPELLGGSPPWKTLD-p E7EVA0;S723-p PPELLGGSPPWKTLD 0.110882718430232 0.00505426043312209 -0.301666666666667 -0.575666666666667 19.9703455991415 33.4666430782139 -0.301666666666667 -0.575666666666667 0.0100685154329438 0.000450127651041711 -3.8725891031195 -7.54642519070494 E7EVA0 NotFound E7EVA0.S723.p_NotFound E7EVA0_S723s _1_1_723_723 E7EVA0 E7EVA0 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29562.29977.3 14.03 14.03 99 1 1 1 0 639.0216 1835.0831 S723s TMT10 715 (R) VPPELLGGsPPWK (T) VPPELLGGS(1.0)PPWK K:TMT10,s:Phosphorylated S MAP4 246695.2 4 20 38.1 865.62 HUMAN 1 -19.9703 -33.4666 PPELNRQSPNPRRGH-p Q7Z5L9;S175-p PPELNRQSPNPRRGH 0.684828545829248 0.0547558804123095 -0.0706666666666667 0.233 3.08368611030157 16.8144220600461 -0.0706666666666667 0.233 0.491622090239938 0.020823694993369 -0.737359233098985 3.2237494385354 Q7Z5L9 IRF2BP2 Q7Z5L9.S175.p_IRF2BP2 Q7Z5L9_S175s _1_1_175_175 Q7Z5L9 Q7Z5L9|Q7Z5L9-2 Interferon regulatory factor 2-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26738.26738.5 20.05 18.24 1.153 7 1 1 0 1134.1794 5586.9295 S175s Hydrogen 129 (R) LGSDFGSSRPAASLAQPPTPQPPPVNGILVPNGFSKLEEPPELNRQsPNPR (R) LGS(0.0)DFGS(0.0)S(0.0)RPAAS(0.0)LAQPPT(0.0)PQPPPVNGILVPNGFS(0.0)KLEEPPELNRQS(0.99)PNPR K:TMT10-Lys-Only,s:Phosphorylated S IRF2BP2 61765.3 15 4 154.1 504.92 HUMAN 1 -3.0837 16.8144 PPELNRQSPNSSSAA-p Q9H1B7;S215-p PPELNRQSPNSSSAA 0.645253408332387 0.157573551480946 0.0633333333333333 0.156333333333333 3.56042513246333 10.5553222102604 0.0633333333333333 0.156333333333333 0.440511739539911 0.0879969822848562 0.832113048735191 2.0774828298914 Q9H1B7 IRF2BPL Q9H1B7.S215.p_IRF2BPL Q9H1B7_S215s _1_1_215_215 Q9H1B7 Q9H1B7 Interferon regulatory factor 2-binding protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21110.21110.5 25.48 25.48 1.35 7 1 1 0 905.4565 4443.3057 S215s TMT10 189 (R) LPNGLGGPNGFPKPTPEEGPPELNRQsPNSSSAAASVASR (R) LPNGLGGPNGFPKPT(0.0)PEEGPPELNRQS(0.99)PNS(0.0)S(0.0)S(0.0)AAAS(0.0)VAS(0.0)R K:TMT10,s:Phosphorylated S IRF2BPL 83627.3 29 3 282.1 386.92 HUMAN 1 3.5604 10.5553 PPFDNQHSQDLDSRQ-p G3V1L9;S1111-p PPFDNQHSQDLDSRQ 0.504040857255443 0.877818677888674 0.0916666666666667 0.0166666666666667 5.49246849543664 0.795293895543754 0.0916666666666667 0.0166666666666667 0.282327479174247 0.832665575975552 1.1935890997875 0.221689986943513 G3V1L9 TJP1 G3V1L9.S1111.p_TJP1 G3V1L9_S1111s _1_1_1111_1111 G3V1L9 G3V1L9|Q07157|G5E9E7|A0A087X0K9|Q07157-2 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10328.10328.3 12.29 8.24 3.188 4 1 1 0 898.413 2613.2643 S1111s TMT10 1098 (K) QPYPSRPPFDNQHsQDLDSR (Q) QPY(0.0)PS(0.0)RPPFDNQHS(0.99)QDLDS(0.0)R s:Phosphorylated S TJP1 197797.8 5 56 41.2 827.72 HUMAN 1 5.4925 0.7953 PPFDRSISQDSLDEL-p Q8N392;S66-p PPFDRSISQDSLDEL 0.880959558381171 0.0310284338356459 -0.024 0.301333333333333 1.08183892206256 20.3839086599843 -0.024 0.301333333333333 0.779499978944228 0.00915396260605492 -0.294282727585439 3.95803522358119 Q8N392 ARHGAP18 Q8N392.S66.p_ARHGAP18 Q8N392_S66s _1_1_66_66 Q8N392 Q8N392|Q8N392-2 Rho GTPase-activating protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36871.36871.4 22.66 22.66 1.116 5 1 1 0 824.6504 3215.607 S66s TMT10 64 (R) SIsQDSLDELSMEDYWIELENIK (K) S(0.0)IS(0.99)QDS(0.0)LDELS(0.0)MEDY(0.0)WIELENIK K:TMT10,s:Phosphorylated S ARHGAP18 75260.7 23 1 3356.1 53 HUMAN 1 -1.0818 20.3839 PPFQTNPSPEMVSKL-p Q4LE39;S675-p PPFQTNPSPEMVSKL 0.651183474642633 0.183397422422996 -0.064 0.154 3.49155239521836 9.68865278301738 -0.064 0.154 0.447553296666088 0.107432262431574 -0.818599846169282 1.92691386396809 Q4LE39 ARID4B Q4LE39.S675.p_ARID4B Q4LE39_S675s _1_1_675_675 Q4LE39 Q4LE39|Q4LE39-2|Q4LE39-3|Q4LE39-4 AT-rich interactive domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25245.25245.4 19.71 19.71 3.719 5 1 1 0 910.7538 3560.0216 S675s TMT10 665 (R) LSKPPFQTNPsPEMVSKLDLTDAK (N) LS(0.0)KPPFQT(0.0)NPS(0.99)PEMVS(0.0)KLDLT(0.0)DAK K:TMT10,s:Phosphorylated S ARID4B 148890.9 23 6 191.1 463.89 HUMAN 1 -3.4916 9.6887 PPFSPPPSPRGEVER-p Q12767-2;S225-p PPFSPPPSPRGEVER 0.325280738407791 0.226849255865274 0.158666666666667 0.130333333333333 9.13662197086649 8.48530853830502 0.158666666666667 0.130333333333333 0.121993812219933 0.141732401610777 1.83201548387398 1.71868263519728 Q12767 KIAA0195 Q12767.2.S225.p_KIAA0195 Q12767-2_S225s _1_1_225_225 Q12767-2 Q12767-2|C9JL75 Isoform 2 of Transmembrane protein 94 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27037.27037.5 29.27 22.69 2.303 2 1 1 0 793.8088 3885.0587 S225s TMT10 202 (R) GIKDDEHIVLEPGDLFPPFSPPPsPRGEVER (G) GIKDDEHIVLEPGDLFPPFS(0.0)PPPS(0.99)PRGEVER K:TMT10,s:Phosphorylated S TMEM94 156822 2 2 1431.1 142.91 HUMAN 1 9.1366 8.4853 PPGAMAASEDEEEEE-p Q9Y3E7-3;S229-p PPGAMAASEDEEEEE 0.71742655687456 0.205285498501219 0.051 0.138 2.72135173907112 9.04917874031267 0.051 0.138 0.534398002438894 0.124474997426558 0.663224257270082 1.81621918193835 Q9Y3E7 CHMP3 Q9Y3E7.3.S229.p_CHMP3 Q9Y3E7-3_S229s _1_1_229_229 Q9Y3E7-3 Q9Y3E7-3|Q9Y3E7-4|Q9Y3E7-2 Isoform 3 of Charged multivesicular body protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25969.25969.4 30.85 30.85 14.029 4 1 1 0 1120.5184 4399.0845 S229s TMT10 209 (K) APSKVTDALPEPEPPGAMAAsEDEEEEEEALEAMQSR (L) APS(0.0)KVT(0.0)DALPEPEPPGAMAAS(0.99)EDEEEEEEALEAMQS(0.0)R K:TMT10,s:Phosphorylated S CHMP3 28443.1 24 1 3130.1 59.94 HUMAN 1 2.7214 9.0492 PPGEDSDTDVDDDSR-p Q14676;T301-p PPGEDSDTDVDDDSR 0.254379274023512 0.0414134903015843 0.165 0.259333333333333 11.3157616211261 18.5367531846528 0.165 0.259333333333333 0.0738624719206168 0.0140063405488207 2.21152335062965 3.56868809621654 Q14676 MDC1 Q14676.T301.p_MDC1 Q14676_S299sT301t_2_2_299_301 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9560.9560.5 17.09 17.09 5.958 4 2 2 0 713.3153 3402.5996 S299s T301t TMT10 292 (R) SQPPGEDsDtDVDDDSRPPGRPAEVHLER (A) S(0.0)QPPGEDS(0.99)DT(0.99)DVDDDS(0.0)RPPGRPAEVHLER s:Phosphorylated S,t:Phosphorylated T MDC1 227803.2 7 58 6.1 1662.62 HUMAN 1 11.3158 18.5368 PPGEKVASLPGDFKQ-p Q7Z5J4;S805-p PPGEKVASLPGDFKQ 0.187254795627764 0.0240742085490205 -0.403666666666667 0.309 14.2908618741402 22.058591883985 -0.403666666666667 0.309 0.0372317811017634 0.00622502086736186 -2.74647933068609 4.33074528572454 Q7Z5J4 RAI1 Q7Z5J4.S805.p_RAI1 Q7Z5J4_S805s _1_1_805_805 Q7Z5J4 Q7Z5J4|Q7Z5J4-2|A0A1W2PQJ7|Q7Z5J4-3|Q7Z5J4-4 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22694.22694.3 11.76 11.76 99 1 1 1 0 843.1314 2447.4113 S805s TMT10 803 (K) VAsLPGDFKQEEVGGVK (E) VAS(1.0)LPGDFKQEEVGGVK K:TMT10,s:Phosphorylated S RAI1 206315.3 2 6 142.1 522.21 HUMAN 1 -14.2909 22.0586 PPGELARSPEAVGPE-p Q96N64;S81-p PPGELARSPEAVGPE 0.275481659662005 0.421810826270854 0.179666666666667 0.126 10.5954090348438 4.99020482427774 0.179666666666667 0.126 0.0871884780038786 0.316941798173885 2.08537040227262 1.10204040885549 Q96N64 PWWP2A Q96N64.S81.p_PWWP2A Q96N64_S81s _1_1_81_81 Q96N64 Q96N64|Q96N64-2|Q96N64-3 PWWP domain-containing protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14575.14575.2 19.38 19.38 99 1 1 1 0 897.4259 1713.8744 S81s Hydrogen 81 (R) sPEAVGPELEAEEK (L) S(1.0)PEAVGPELEAEEK K:TMT10-Lys-Only,s:Phosphorylated S PWWP2A 82415.3 4 1 1984.1 104.07 HUMAN 1 10.5954 4.9902 PPGERGRSASPPQKR-p P55199;S317-p PPGERGRSASPPQKR 0.294305276064614 0.546013654745977 0.174 0.0853333333333333 10.023288823239 3.53497582347195 0.174 0.0853333333333333 0.099465190254527 0.44310068115804 1.9857568172731 0.826997748564775 P55199 ELL P55199.S317.p_ELL P55199_S317sS319s_2_2_317_319 P55199 P55199|U3KQ90 RNA polymerase II elongation factor ELL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4491.4491.2 9.94 9.94 99 2 2 2 0 658.8028 1156.6636 S317s S319s Hydrogen 315 (R) GRsAsPPQK (R) GRS(1.0)AS(1.0)PPQK K:TMT10-Lys-Only,s:Phosphorylated S ELL 69005.2 2 5 1646.1 123.88 HUMAN 1 10.0233 3.535 PPGGSWGSGRSSPLL-p Q9C075;S61-p PPGGSWGSGRSSPLL 0.197549381060386 0.0149802667695485 0.233666666666667 0.377333333333333 13.731955349197 25.2550026329856 0.233666666666667 0.377333333333333 0.0423452269755875 0.00298194574006875 2.64383558159225 5.10219936693611 Q9C075 KRT23 Q9C075.S61.p_KRT23 Q9C075_S61s _1_1_61_61 Q9C075 Q9C075 Keratin, type I cytoskeletal 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8454.8865.2 10.69 5.69 1.128 3 1 1 0 805.8532 1530.7321 S61s TMT10 51 (R) SCPPPGGSWGsGR (S) S(0.0)CPPPGGS(0.0)WGS(0.99)GR C:Carbamidomethylation,s:Phosphorylated S KRT23 48301.4 6 6 2033.1 101.49 HUMAN 1 13.732 25.255 PPGHDQDSLKKSQGV-p Q9HD26;S276-p PPGHDQDSLKKSQGV 0.483726315617236 0.248192961754145 0.102666666666667 0.120333333333333 5.81089568277521 7.97300830934142 0.102666666666667 0.120333333333333 0.262367738408268 0.159477408236347 1.25080198968282 1.62996310981808 Q9HD26 GOPC Q9HD26.S276.p_GOPC Q9HD26_S276s _1_1_276_276 Q9HD26 Q9HD26|Q9HD26-2|F5H1Y4|Q9HD26-3 Golgi-associated PDZ and coiled-coil motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7055.7055.5 13.81 13.81 99 1 1 1 0 515.2797 2492.4011 S276s TMT10 264 (K) RPMQAPPGHDQDsLKK (S) RPMQAPPGHDQDS(1.0)LKK K:TMT10,s:Phosphorylated S GOPC 50918.4 4 1 3710.1 44.75 HUMAN 1 5.8109 7.973 PPGINVASLEWVSRE-p Q9BZS1-3;S122-p PPGINVASLEWVSRE 0.0613809554565416 0.0126929156733856 -0.402333333333333 -0.386 26.4297063358606 26.4370584705301 -0.402333333333333 -0.386 0.0022752512750289 0.00227140277978934 -5.41523157481574 -5.40992776792774 Q9BZS1 FOXP3 Q9BZS1.3.S122.p_FOXP3 Q9BZS1-3_S122s_1_1_122_122 Q9BZS1-3 Q9BZS1-3|B7ZLG1|A0A0C4DFW6 Isoform 3 of Forkhead box protein P3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35843.35843.5 7.14 2.49 7.145 4 1 1 0 822.4323 4027.1901 N119n S122s Hydrogen 110 (K) ARPGLPPGInVAsLEWVSREPALLCTFPNPSAPRK (D) ARPGLPPGIN(0.99)VAS(0.99)LEWVS(0.0)REPALLCT(0.0)FPN(0.0)PS(0.0)APRK C:Carbamidomethylation,K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S FOXP3 50412.6 1 1 7248.1 7.14 HUMAN 1 -26.4297 -26.4371 PPGNDPVSPAMVRSR-p O94966-5;S345-p PPGNDPVSPAMVRSR 0.461487849875414 0.0884166136482253 0.112 -0.219666666666667 6.19268199419455 13.9419318397019 0.112 -0.219666666666667 0.240287843936878 0.0403465882330846 1.31881657717721 -2.68066326572147 O94966 USP19 O94966.5.S345.p_USP19 O94966-5_S345s _1_1_345_345 O94966-5 O94966-5|O94966-6|O94966-7|B5MEG5|E7EST9|O94966-3|O94966-4|O94966-2 Isoform 5 of Ubiquitin carboxyl-terminal hydrolase 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16103.16726.3 17.99 17.99 99 1 1 1 0 605.9728 1735.9363 S345s TMT10 336 (K) AVPPGNDPVsPAMVR (S) AVPPGNDPVS(1.0)PAMVR s:Phosphorylated S USP19 158029.3 6 3 2308.1 88.68 HUMAN 1 6.1927 -13.9419 PPGQEAGSEEEGSSA-p O75153;S664-p PPGQEAGSEEEGSSA 0.547228805683263 0.147311158874702 -0.123333333333333 0.222 4.83354634005324 10.948311107971 -0.123333333333333 0.222 0.328583208472432 0.0803838659605102 -1.07346444642329 2.1460940138906 O75153 CLUH O75153.S664.p_CLUH O75153_S664s _1_1_664_664 O75153 O75153 Clustered mitochondria protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11753.11753.3 22.2 21.43 4.319 5 1 1 0 919.7557 2677.2841 S664s TMT10 654 (K) SEDPPGQEAGsEEEGSSASGLAK (V) S(0.0)EDPPGQEAGS(0.99)EEEGS(0.0)S(0.0)AS(0.0)GLAK K:TMT10,s:Phosphorylated S CLUH 148093.5 2 4 2371.1 86.28 HUMAN 1 -4.8335 10.9483 PPGQVAASPDPTT__-p O43598;S169-p PPGQVAASPDPTT__ 0.233609105961796 0.473690328055589 -0.215666666666667 -0.109333333333333 12.1302853963023 4.32543570461699 -0.215666666666667 -0.109333333333333 0.0612310152485584 0.369365586009398 -2.35546508993178 -0.978672044602712 O43598 DNPH1 O43598.S169.p_DNPH1 O43598_S169s _1_1_169_169 O43598 O43598 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21574.21574.2 16.73 17.34 3.506 4 1 1 0 1086.488 2092.0072 S169s TMT10 157 (R) YFEADPPGQVAAsPDPTT (-) Y(0.0)FEADPPGQVAAS(0.99)PDPT(0.0)T(0.0) s:Phosphorylated S DNPH1 19222.2 1 5 2326.1 87.8 HUMAN 1 -12.1303 -4.3254 PPGSAARSPPYEGKV-p Q5TGY3;S1476-p PPGSAARSPPYEGKV 0.943470264801347 0.210674003438498 -0.0106666666666667 -0.154 0.497871972919689 8.89659720338811 -0.0106666666666667 -0.154 0.891687754844915 0.12892593202227 -0.142703219607911 -1.78982762731035 Q5TGY3 AHDC1 Q5TGY3.S1476.p_AHDC1 Q5TGY3_S1476s _1_1_1476_1476 Q5TGY3 Q5TGY3 AT-hook DNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18377.18377.3 14.37 14.37 1.215 6 1 1 0 898.4435 2613.3502 S1476s TMT10 1463 (K) GTAYWYPPGSAARsPPYEGK (V) GT(0.0)AY(0.0)WY(0.0)PPGS(0.0)AARS(0.99)PPY(0.0)EGK K:TMT10,s:Phosphorylated S AHDC1 170057.9 4 17 334.1 355.89 HUMAN 1 -0.4979 -8.8966 PPGSGASTPVGPWDQ-p Q8TE77;T17-p PPGSGASTPVGPWDQ 0.336940767668124 0.296831780109512 0.179666666666667 -0.117 8.80522039605078 6.96304216542909 0.179666666666667 -0.117 0.1316673092413 0.201231416121518 1.77464623250525 -1.4541427556191 Q8TE77 SSH3 Q8TE77.T17.p_SSH3 Q8TE77_T17t _1_1_17_17 Q8TE77 Q8TE77|Q8TE77-2|Q8TE77-4|C9JUG3 Protein phosphatase Slingshot homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17773.17773.3 15.54 15.54 1.128 4 1 1 0 768.3741 2223.1356 T17t TMT10 9 (R) SPPGSGAStPVGPWDQAVQR (R) S(0.0)PPGS(0.0)GAS(0.0)T(0.99)PVGPWDQAVQR t:Phosphorylated T SSH3 73336.6 2 2 930.1 199.29 HUMAN 1 8.8052 -6.963 PPGSGPPTPSRDSAR-p Q96NU1;T422-p PPGSGPPTPSRDSAR 0.63340252847051 0.875261447812302 0.186333333333333 -0.057 3.69193169621788 0.813493207347652 0.186333333333333 -0.057 0.427372752960607 0.829183553123278 0.857764123861809 -0.226396048935221 Q96NU1 SAMD11 Q96NU1.T422.p_SAMD11 Q96NU1_S418sT422t_2_2_418_422 Q96NU1 Q96NU1-5|A0A087WYW1|Q96NU1-4|Q96NU1-6 Sterile alpha motif domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29483.29483.5 11.49 9.95 1.2 4 2 2 0 754.9952 3611.0019 S418s T422t TMT10 395 (R) GALLVLNHGAAPLLALPPQGPPGsGPPtPSRDSAR (R) GALLVLNHGAAPLLALPPQGPPGS(0.99)GPPT(0.99)PS(0.0)RDS(0.0)AR s:Phosphorylated S,t:Phosphorylated T SAMD11 73391.4 1 3 4292.1 34.11 HUMAN 1 3.6919 -0.8135 PPGVRPESICSMPAY-p Q5VTI5;S393-p PPGVRPESICSMPAY 0.263054148508799 0.0764414152524904 0.275 0.337333333333333 11.0000396844895 14.8175387980315 0.275 0.337333333333333 0.0794320976431164 0.032979655912546 2.15611629659574 2.84247274108243 Q5VTI5 NotFound Q5VTI5.S393.p_NotFound Q5VTI5_S393sS396s_2_2_393_396 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20330.20330.4 10.5 10.5 1.16 12 2 2 0 1218.5262 4695.1434 S393s S396s M397m TMT10 366 (R) RVPEYYGPYSSQYPDDYQYYPPGVRPEsICsmPAYDR (I) RVPEY(0.0)Y(0.0)GPY(0.0)S(0.0)S(0.0)QY(0.0)PDDY(0.0)QY(0.0)Y(0.0)PPGVRPES(0.99)ICS(0.99)M(1.0)PAY(0.0)DR C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine PLEKHA6 119745.7 1 37 52.1 743.36 HUMAN 1 11 14.8175 PPGYKPGSPPSFRTG-p P54259;S661-p PPGYKPGSPPSFRTG 0.380643803112374 0.0371504551617536 -0.181666666666667 0.344 7.75264273653337 19.2242354819819 -0.181666666666667 0.344 0.167778275552425 0.0119557397214133 -1.59221919197567 3.71110336167913 P54259 ATN1 P54259.S661.p_ATN1 P54259_T653tS661s_2_2_653_661 P54259 P54259 Atrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16268.16268.4 10.72 10.72 2.429 5 2 2 0 570.2824 2118.1748 T653t S661s TMT10 651 (K) TAtPPGYKPGsPPSFR (T) T(0.0)AT(0.99)PPGY(0.0)KPGS(0.99)PPS(0.0)FR K:TMT10,t:Phosphorylated T,s:Phosphorylated S ATN1 125583.1 5 14 869.1 209.92 HUMAN 1 -7.7526 19.2242 PPHCLEITPPSSEKL-p Q5BJF6-4;T87-p PPHCLEITPPSSEKL 0.859922192386175 0.167788200693427 0.0256666666666667 0.138333333333333 1.27996578814608 10.1982659929258 0.0256666666666667 0.138333333333333 0.744737840607714 0.0955373961931395 0.342702038663582 2.01534479491077 Q5BJF6 ODF2 Q5BJF6.4.T87.p_ODF2 Q5BJF6-4_T87t _1_1_87_87 Q5BJF6-4 Q5BJF6|Q5BJF6-4|Q5BJF6-7|Q5BJF6-6|Q5BJF6-10 Isoform 4 of Outer dense fiber protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19636.19636.4 14.01 14.01 5.343 3 1 1 0 640.5687 2479.2692 T87t TMT10 77 (K) WENPPHCLEItPPSSEK (L) WENPPHCLEIT(0.99)PPS(0.0)S(0.0)EK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ODF2 96031.2 3 4 853.1 211.96 HUMAN 1 1.28 10.1983 PPHTRAPSPLGPTRD-p Q0VG06;S667-p PPHTRAPSPLGPTRD 0.841204483666408 0.273207931204308 0.0323333333333333 0.191333333333333 1.45078713561408 7.42345518873612 0.0323333333333333 0.191333333333333 0.716013624796428 0.180989958779903 0.383420991088629 1.53450197073804 Q0VG06 FAAP100 Q0VG06.S667.p_FAAP100 Q0VG06_S667s _1_1_667_667 Q0VG06 Q0VG06|Q0VG06-3|E7EVV8 Fanconi anemia core complex-associated protein 100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23345.23345.4 17.68 17.68 4.457 6 1 1 0 878.9311 3432.7329 S667s Hydrogen 665 (R) APsPLGPTRDPVATFLETCREPGSQPAGPASLR (A) APS(0.99)PLGPT(0.0)RDPVAT(0.0)FLET(0.0)CREPGS(0.0)QPAGPAS(0.0)LR C:Carbamidomethylation,s:Phosphorylated S FAAP100 95599.4 5 2 2929.1 65.74 HUMAN 1 1.4508 7.4235 PPIAPYPSPTRKDLL-p Q14164;S673-p PPIAPYPSPTRKDLL 0.298571414929819 0.00739033881289099 -0.146 -0.614333333333333 9.86872945689035 30.4814595811073 -0.146 -0.614333333333333 0.103068760746412 0.00089506390105096 -1.95891305094495 -6.56932327600757 Q14164 IKBKE Q14164.S673.p_IKBKE Q14164_S673s _1_1_673_673 Q14164 Q14164|Q14164-2 Inhibitor of nuclear factor kappa-B kinase subunit epsilon HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14361.14361.3 15.27 15.27 1.543 4 1 1 0 791.7634 2293.3069 S673s TMT10 660 (K) GAQASPPPIAPYPsPTRK (D) GAQAS(0.0)PPPIAPY(0.0)PS(0.99)PT(0.0)RK K:TMT10,s:Phosphorylated S IKBKE 81202.6 2 2 5227.1 21.54 HUMAN 1 -9.8687 -30.4815 PPIQRRYSPSPPPKR-p A9Z1X7;S614-p PPIQRRYSPSPPPKR 0.343941772710486 0.449641067380642 0.131 0.0953333333333334 8.60949375661882 4.62650839222941 0.131 0.0953333333333334 0.137737001521543 0.344626889922564 1.74076433937334 1.03495034111615 A9Z1X7 NotFound A9Z1X7.S614.p_NotFound A9Z1X7_S614s _1_1_614_614 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7565.7565.2 11.52 11.52 2.255 3 1 1 0 783.9253 1486.8782 S614s TMT10 612 (R) RYsPSPPPK (R) RY(0.0)S(0.99)PS(0.0)PPPK K:TMT10,s:Phosphorylated S SRRM1 103445.7 3 27 8.1 1346.57 HUMAN 1 8.6095 4.6265 PPIRKGWSMSEQSEE-p Q9UHB6-4;S618-p PPIRKGWSMSEQSEE 0.262394171681466 0.901196265560022 0.295 -0.0153333333333333 11.019172458934 0.631323505500379 0.295 -0.0153333333333333 0.0790829304880517 0.864704361344703 2.15946853870031 -0.178641784662266 Q9UHB6 LIMA1 Q9UHB6.4.S618.p_LIMA1 Q9UHB6-4_S618s _1_1_618_618 Q9UHB6-4 Q9UHB6-4|Q9UHB6-5|Q9UHB6-2|F8VQE1|Q9UHB6-3|F8VS07 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14517.14517.2 15.9 15.9 2.207 4 1 1 0 967.9104 1854.849 S618s TMT10 616 (K) GWsMSEQSEESVGGR (V) GWS(0.99)MS(0.0)EQS(0.0)EES(0.0)VGGR s:Phosphorylated S LIMA1 85678.4 4 27 42.1 822.82 HUMAN 1 11.0192 -0.6313 PPIRLHLSPVGIPGS-p Q9H7P9;S90-p PPIRLHLSPVGIPGS 0.388754166810574 0.0825818079894562 0.119 -0.245666666666667 7.5924948931733 14.346705217199 0.119 -0.245666666666667 0.174080654428727 0.0367561045589593 1.56437848753833 -2.75509680507929 Q9H7P9 PLEKHG2 Q9H7P9.S90.p_PLEKHG2 Q9H7P9_S90s _1_1_90_90 Q9H7P9 Q9H7P9|Q9H7P9-3 Pleckstrin homology domain-containing family G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19753.19753.3 14.68 14.68 14.684 2 1 1 0 538.2984 1532.911 S90s TMT10 87 (R) LHLsPVGIPGSAR (P) LHLS(0.99)PVGIPGS(0.0)AR s:Phosphorylated S PLEKHG2 149335.7 2 2 886.1 206.23 HUMAN 1 7.5925 -14.3467 PPIRRWRSLPGSPEF-p Q96S53;S456-p PPIRRWRSLPGSPEF 0.911605742223265 0.881387223239297 -0.023 0.016 0.784031944159685 0.771010829365616 -0.023 0.016 0.834827613197861 0.837334368142939 -0.218791803204917 0.215388978604093 Q96S53 TESK2 Q96S53.S456.p_TESK2 Q96S53_S456s _1_1_456_456 Q96S53 Q96S53|Q96S53-2|Q96S53-3 Dual specificity testis-specific protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21089.21089.3 25.2 25.2 7.535 4 1 1 0 1124.8521 3292.5692 S456s Hydrogen 456 (R) sLPGSPEFLHQEACPFVGREESLSDGPPPR (L) S(0.99)LPGS(0.0)PEFLHQEACPFVGREES(0.0)LS(0.0)DGPPPR C:Carbamidomethylation,s:Phosphorylated S TESK2 64265.9 5 4 1787.1 114.9 HUMAN 1 -0.784 0.771 PPITRSQSYLTLWEE-p Q9H5P4-3;S436-p PPITRSQSYLTLWEE 0.275481256258864 0.763190803318958 -0.194 0.0526666666666667 10.5964783196555 1.62223616933727 -0.194 0.0526666666666667 0.0871670138031971 0.68829780260207 -2.08555700373511 0.423371462470717 Q9H5P4 PDZD7 Q9H5P4.3.S436.p_PDZD7 Q9H5P4-3_S436s _1_1_436_436 Q9H5P4-3 Q9H5P4-3|Q9H5P4-2 Isoform 3 of PDZ domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27104.27104.3 10.87 10.87 1.122 4 1 1 0 641.329 1842.0049 S436s TMT10 434 (R) SQsYLTLWEEK (Q) S(0.0)QS(0.99)Y(0.0)LT(0.0)LWEEK K:TMT10,s:Phosphorylated S PDZD7 112263.4 1 1 3642.1 46.24 HUMAN 1 -10.5965 1.6222 PPKAQSVSPVQAPPP-p I3L2J0;S1813-p PPKAQSVSPVQAPPP 0.417812171186908 0.0352557472477852 0.134 0.26 6.9955349141004 19.5584652929455 0.134 0.26 0.19973147469839 0.0110701491108469 1.46023160014322 3.78138735897051 I3L2J0 NotFound I3L2J0.S1813.p_NotFound I3L2J0_S1813s _1_1_1813_1813 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20552.20756.3 23.57 23.57 2.167 3 1 1 0 875.4785 2544.455 S1813s TMT10 1809 (K) AQSVsPVQAPPPGGSAQLLPGK (V) AQS(0.0)VS(0.99)PVQAPPPGGS(0.0)AQLLPGK K:TMT10,s:Phosphorylated S CIC 259056.7 3 30 23.1 999.57 HUMAN 1 6.9955 19.5585 PPKDKCLSPDLPLPK-p Q9BZE0;S159-p PPKDKCLSPDLPLPK 0.765531490043926 0.30957701882735 -0.0493333333333333 0.105 2.22830741512842 6.73115200385671 -0.0493333333333333 0.105 0.59864486070221 0.212268132764552 -0.558789058996761 1.41349017208936 Q9BZE0 GLIS2 Q9BZE0.S159.p_GLIS2 Q9BZE0_S159s _1_1_159_159 Q9BZE0 Q9BZE0 Zinc finger protein GLIS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25432.25432.2 12.17 12.17 99 1 1 1 0 839.4574 1597.9388 S159s TMT10 157 (K) CLsPDLPLPK (Q) CLS(1.0)PDLPLPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GLIS2 56486.5 2 4 1864.1 110.54 HUMAN 1 -2.2283 6.7312 PPKIGTPTRPCPLPP-p P42566;T779-p PPKIGTPTRPCPLPP 0.90889998374688 0.0310889125388133 -0.0213333333333333 -0.279333333333333 0.814728970716086 20.3686029748355 -0.0213333333333333 -0.279333333333333 0.828947646628 0.00918628050413418 -0.226736906572823 -3.95471892954622 P42566 EPS15 P42566.T779.p_EPS15 P42566_T779t _1_1_779_779 P42566 P42566|B1AUU8|P42566-2 Epidermal growth factor receptor substrate 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10864.11073.4 14.32 14.32 2.079 2 1 1 0 547.0576 2105.2418 T779t TMT10 775 (K) IGTPtRPCPLPPGKR (S) IGT(0.0)PT(0.99)RPCPLPPGKR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T EPS15 99281.5 2 13 342.1 353.17 HUMAN 1 -0.8147 -20.3686 PPKKGLGSPTVHKIS-p P22607-2;S410-p PPKKGLGSPTVHKIS 0.211667623687146 0.00502181480803641 -0.415666666666667 -0.609333333333333 13.0185891097156 33.5190338081419 -0.415666666666667 -0.609333333333334 0.0499046586139883 0.000444730197324128 -2.51441712089228 -7.5646031080573 P22607 FGFR3 P22607.2.S410.p_FGFR3 P22607-2_S410s _1_1_410_410 P22607-2 P22607-2|F8W9L4|P22607-4 Isoform 2 of Fibroblast growth factor receptor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9634.9634.3 11.63 11.63 1.422 2 1 1 0 478.6028 1353.8255 S410s TMT10 407 (K) GLGsPTVHK (I) GLGS(0.99)PT(0.0)VHK K:TMT10,s:Phosphorylated S FGFR3 89125.6 2 1 2711.1 73.11 HUMAN 1 -13.0186 -33.519 PPKKKDLSLEEIQKK-p P16949;S46-p PPKKKDLSLEEIQKK 0.111075288137026 0.0145497038675128 -0.345333333333333 -0.361333333333333 19.9544732644612 25.4523304233622 -0.345333333333333 -0.361333333333333 0.0101053805654766 0.00284948882203168 -3.8691866466128 -5.15267460602304 P16949 STMN1 P16949.S46.p_STMN1 P16949_S46s _1_1_46_46 P16949 Q93045-2|P16949-2|E5RGX5 Stathmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20344.20344.2 13.84 6.05 99 1 1 1 0 806.9344 1532.8936 S46s TMT10 44 (K) DLsLEEIQK (K) DLS(1.0)LEEIQK K:TMT10,s:Phosphorylated S STMN1 17302.2 8 7 690.1 243.18 HUMAN 1 -19.9545 -25.4523 PPKLACRTPSPARPA-p Q9H211;T29-p PPKLACRTPSPARPA 0.102957268131371 0.000952253650599092 -0.603333333333333 -1.59166666666667 20.8483167614311 54.2616681019319 -0.603333333333333 -1.59166666666667 0.00822561396522272 3.748290047722e-06 -4.06342003240675 -18.8596098917681 Q9H211 CDT1 Q9H211.T29.p_CDT1 Q9H211_T29tS31s_2_2_29_31 Q9H211 Q9H211 DNA replication factor Cdt1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9189.9189.4 9.77 9.77 99 2 2 2 0 489.4961 1795.0322 T29t S31s TMT10 25 (K) LACRtPsPARPALR (A) LACRT(1.0)PS(1.0)PARPALR C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S CDT1 60959.8 2 8 1732.1 118.73 HUMAN 1 -20.8483 -54.2617 PPKLYRYSPQSFLPD-p Q9HCM1;S221-p PPKLYRYSPQSFLPD 0.702689989895341 0.0636231086766517 -0.061 0.257333333333333 2.88109504753233 15.9308883187439 -0.061 0.257333333333333 0.515098749140872 0.0255217921900306 -0.696156125595742 3.05278578694824 Q9HCM1 KIAA1551 Q9HCM1.S221.p_KIAA1551 Q9HCM1_S221s _1_1_221_221 Q9HCM1 Q9HCM1 Uncharacterized protein KIAA1551 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24827.24827.3 10.44 10.44 1.186 6 1 1 0 861.1215 2501.3804 S221s TMT10 217 (K) LYRYsPQSFLPDSTIQK (Q) LY(0.0)RY(0.0)S(0.99)PQS(0.0)FLPDS(0.0)T(0.0)IQK K:TMT10,s:Phosphorylated S KIAA1551 196679.6 2 1 1693.1 120.71 HUMAN 1 -2.8811 15.9309 PPKMWKTSPDPSPVS-p Q13469;S326-p PPKMWKTSPDPSPVS 0.170726742216157 0.71463620937592 -0.245333333333333 0.0563333333333333 15.3169787573393 2.00786243429088 -0.245333333333333 0.0563333333333334 0.0293969398839238 0.629816097463642 -2.93811493026458 0.51048317439499 Q13469 NFATC2 Q13469.S326.p_NFATC2 Q13469_S326s _1_1_326_326 Q13469 Q13469|Q13469-2|Q13469-4|Q13469-3|Q13469-5 Nuclear factor of activated T-cells, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11785.11785.2 9.74 9.74 1.144 5 1 1 0 939.985 1798.9951 S326s TMT10 325 (K) TsPDPSPVSAAPSK (A) T(0.0)S(0.99)PDPS(0.0)PVS(0.0)AAPS(0.0)K K:TMT10,s:Phosphorylated S NFATC2 101056.9 1 7 843.1 214.04 HUMAN 1 -15.317 2.0079 PPKQKKQSLGEDHVI-p Q9HBD1;S1119-p PPKQKKQSLGEDHVI 0.171396449036957 0.2553286116758 -0.236 0.143 15.247015460981 7.81019377791377 -0.236 0.143 0.0298743492525098 0.165569608629525 -2.92490880304911 1.60172106538168 Q9HBD1 RC3H2 Q9HBD1.S1119.p_RC3H2 Q9HBD1_S1119s _1_1_1119_1119 Q9HBD1 Q9HBD1 Roquin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14198.14198.3 15.78 8.28 99 1 1 1 0 840.7946 2440.4015 S1119s TMT10 1117 (K) KQsLGEDHVILEEQK (T) KQS(1.0)LGEDHVILEEQK K:TMT10,s:Phosphorylated S RC3H2 132864.3 1 7 1922.1 106.92 HUMAN 1 -15.247 7.8102 PPKRARPSPGHCLPE-p Q9BWH6;S80-p PPKRARPSPGHCLPE 0.405908266342967 0.697039615659779 0.135 0.141 7.22855999631573 2.1548241136364 0.135 0.141 0.189297117292245 0.60886020369354 1.50096510558612 0.542757511563423 Q9BWH6 RPAP1 Q9BWH6.S80.p_RPAP1 Q9BWH6_S80s _1_1_80_80 Q9BWH6 Q9BWH6|Q9BWH6-2|H3BRE8 RNA polymerase II-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5364.5364.3 20.56 20.56 99 1 1 1 0 724.3015 2090.9196 S80s Hydrogen 77 (R) ARPsPGHCLPEDEDPEER (L) ARPS(1.0)PGHCLPEDEDPEER C:Carbamidomethylation,s:Phosphorylated S RPAP1 154292.4 2 2 996.1 190.51 HUMAN 1 7.2286 2.1548 PPKRRTASPPPPPKR-p A9Z1X7;S625-p PPKRRTASPPPPPKR 0.159845829771225 0.372614366597267 0.317 0.0916666666666667 15.948936747645 5.68752172465143 0.317 0.0916666666666667 0.0254159487001862 0.269927932055376 3.05839173338003 1.22841354971387 A9Z1X7 NotFound A9Z1X7.S625.p_NotFound A9Z1X7_S625s _1_1_625_625 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6200.6200.3 14.28 14.28 2.128 2 1 1 0 529.3005 1505.9204 S625s TMT10 622 (R) RTAsPPPPPK (R) RT(0.0)AS(0.99)PPPPPK K:TMT10,s:Phosphorylated S SRRM1 103445.7 24 29 8.1 1346.57 HUMAN 1 15.9489 5.6875 PPKRSCPSFSASSEG-p D6RFG8;S11-p PPKRSCPSFSASSEG 0.772101852748281 0.132411490459811 -0.0686666666666667 0.157 2.14819112636934 11.5738137768488 -0.0686666666666667 0.157 0.609790827445172 0.0696015036877486 -0.541375546830359 2.25588213559825 D6RFG8 NotFound D6RFG8.S11.p_NotFound D6RFG8_S11s _1_1_11_11 D6RFG8 D6RFG8|P27707|D6RCP9|D6RG38 Deoxycytidine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8470.8470.2 12.72 6.13 2.144 6 1 1 0 841.359 1601.7427 S11s TMT10 8 (R) SCPsFSASSEGTR (I) S(0.0)CPS(0.99)FS(0.0)AS(0.0)S(0.0)EGT(0.0)R C:Carbamidomethylation,s:Phosphorylated S DCK 37277.6 2 1 2927.1 65.76 HUMAN 1 -2.1482 11.5738 PPKTSPGSPRLQQGA-p Q9H6F5;S69-p PPKTSPGSPRLQQGA 0.153509059207348 0.937872407519509 0.407666666666667 0.0193333333333333 16.3558757119837 0.394874528672777 0.407666666666667 0.0193333333333333 0.0231426149096297 0.913087814786774 3.13682384286661 0.114333731490449 Q9H6F5 CCDC86 Q9H6F5.S69.p_CCDC86 Q9H6F5_S69s _1_1_69_69 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7885.7885.3 14.43 10.14 2.169 4 1 1 0 777.0861 2249.2766 S69s TMT10 54 (R) AGLGSPERPPKTSPGsPR (L) AGLGS(0.0)PERPPKT(0.0)S(0.0)PGS(0.99)PR K:TMT10,s:Phosphorylated S CCDC86 40349 5 7 346.1 352.36 HUMAN 1 16.3559 0.3949 PPLEREDSGTFSLGK-p O75569;S18-p PPLEREDSGTFSLGK 0.233121410286087 0.301740073616436 0.177666666666667 0.110333333333333 12.154602714259 6.86894875800523 0.177666666666667 0.110333333333333 0.060889124362421 0.205638829978058 2.35978715708737 1.43766355632928 O75569 PRKRA O75569.S18.p_PRKRA O75569_S18s _1_1_18_18 O75569 O75569|G5E9Q4 Interferon-inducible double-stranded RNA-dependent protein kinase activator A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16976.16976.2 12.35 5.07 1.126 3 1 1 0 789.8904 1498.8153 S18s TMT10 16 (R) EDsGTFSLGK (M) EDS(0.99)GT(0.0)FS(0.0)LGK K:TMT10,s:Phosphorylated S PRKRA 34860 11 1 2945.1 65.23 HUMAN 1 12.1546 6.8689 PPLERQDSLASAKRG-p Q8WV41;S169-p PPLERQDSLASAKRG 0.187254795627764 0.151386277334352 0.342 -0.272 14.2829353897126 10.7826945575764 0.342 -0.272 0.037299796382744 0.0835084733474898 2.74501545960354 -2.11714847557505 Q8WV41 SNX33 Q8WV41.S169.p_SNX33 Q8WV41_S169s _1_1_169_169 Q8WV41 Q8WV41 Sorting nexin-33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8851.8851.2 11.13 11.13 3.33 2 1 1 0 679.3603 1277.7465 S169s TMT10 167 (R) QDsLASAK (R) QDS(0.99)LAS(0.0)AK K:TMT10,s:Phosphorylated S SNX33 65605.7 5 2 2566.1 78.31 HUMAN 1 14.2829 -10.7827 PPLGGAASPEVLAPV-p Q96RY5;S596-p PPLGGAASPEVLAPV 0.887815236374425 0.302366455694958 0.022 0.108666666666667 1.00635276924591 6.85808656959082 0.022 0.108666666666667 0.793167157330181 0.20615379931127 0.275471194445604 1.43575979575501 Q96RY5 CRAMP1 Q96RY5.S596.p_CRAMP1 Q96RY5_S596s _1_1_596_596 Q96RY5 Q96RY5 Protein cramped-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19292.19292.5 21.85 20.33 7.469 4 1 1 0 646.7328 3149.6665 S596s TMT10 579 (R) CADTRPGSEQPPLGGAAsPEVLAPVSK (E) CADT(0.0)RPGS(0.0)EQPPLGGAAS(0.99)PEVLAPVS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CRAMP1 135914.1 6 4 647.1 254.68 HUMAN 1 1.0064 6.8581 PPLKRQRTAEAFSDE-p Q32P41;T494-p PPLKRQRTAEAFSDE 0.810040232987593 0.011435776983551 0.0436666666666667 0.516666666666667 1.75596201647625 27.1758186384656 0.0436666666666667 0.516666666666667 0.667427041169579 0.00191609984679739 0.45405319486089 5.60899660395117 Q32P41 TRMT5 Q32P41.T494.p_TRMT5 Q32P41_T494t _1_1_494_494 Q32P41 Q32P41 tRNA (guanine(37)-N1)-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9012.9012.3 14.78 14.78 7.394 2 1 1 0 607.3047 1739.9328 T494t TMT10 492 (R) QRtAEAFSDEK (T) QRT(0.99)AEAFS(0.0)DEK K:TMT10,t:Phosphorylated T TRMT5 58587.5 3 1 4905.1 25.22 HUMAN 1 1.756 27.1758 PPLKRSRSAPDGGDE-p Q8IZQ1;S2492-p PPLKRSRSAPDGGDE 0.718947568381735 0.14610606990444 -0.0496666666666667 0.158333333333333 2.70426744498503 11.0035710054468 -0.0496666666666667 0.158333333333333 0.536504359768126 0.0793675363295459 -0.659677835658571 2.15576270488054 Q8IZQ1 WDFY3 Q8IZQ1.S2492.p_WDFY3 Q8IZQ1_S2492s _1_1_2492_2492 Q8IZQ1 Q8IZQ1|Q8IZQ1-2 WD repeat and FYVE domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22484.22484.4 20.33 16.67 20.326 5 1 1 0 1089.4943 4274.9858 S2492s Hydrogen 2492 (R) sAPDGGDEENQEQLQDQIAEGSSIEEEEKTDNATLLR (L) S(0.99)APDGGDEENQEQLQDQIAEGS(0.0)S(0.0)IEEEEKT(0.0)DNAT(0.0)LLR K:TMT10-Lys-Only,s:Phosphorylated S WDFY3 399758.5 4 5 977.1 192.72 HUMAN 1 -2.7043 11.0036 PPLLPLGTPC_____-p O60883;T479-p PPLLPLGTPC_____ 0.906964673578303 0.192973562461798 0.025 -0.176333333333333 0.832053928816918 9.39537555477719 0.025 -0.176333333333333 0.825647380024366 0.114937684712358 0.231203612769608 -1.87612146649234 O60883 GPR37L1 O60883.T479.p_GPR37L1 O60883_T479t _1_1_479_479 O60883 O60883 Prosaposin receptor GPR37L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28888.28888.2 11.58 11.58 8.862 2 1 1 0 795.3976 1509.8184 T479t TMT10 470 (R) ESPPLLPLGtPC (-) ES(0.0)PPLLPLGT(0.99)PC C:Carbamidomethylation,t:Phosphorylated T GPR37L1 54138.9 1 1 6452.1 11.58 HUMAN 1 0.8321 -9.3954 PPLMKKHSQTDLVSR-p E9PPM1;S14-p PPLMKKHSQTDLVSR 0.855856838033951 0.523591645961697 -0.0276666666666667 -0.0946666666666667 1.31531977762321 3.7758306836228 -0.0276666666666667 -0.0946666666666667 0.738699869397778 0.419195808606731 -0.3512043583548 -0.873887333165792 E9PPM1 NotFound E9PPM1.S14.p_NotFound E9PPM1_S14s _1_1_14_14 E9PPM1 E9PPM1|O14683|U3KQ32|E9PIK4|E9PNB3 Tumor protein p53-inducible protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5468.5468.2 10.89 10.89 1.103 3 1 1 0 854.9611 1628.9484 S14s TMT10 12 (K) KHsQTDLVSR (L) KHS(0.99)QT(0.0)DLVS(0.0)R K:TMT10,s:Phosphorylated S TP53I11 26234.9 26 1 4744.1 27.15 HUMAN 1 -1.3153 -3.7758 PPLNHSRSIPMPASR-p P35568;S374-p PPLNHSRSIPMPASR 0.670375570853073 0.0243905121608163 0.105 -0.433666666666667 3.25173941418619 21.9673236583193 0.105 -0.433666666666667 0.472961792768552 0.00635722575484593 0.771095626367638 -4.30991218968604 P35568 IRS1 P35568.S374.p_IRS1 P35568_S374s _1_1_374_374 P35568 P35568 Insulin receptor substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13157.13157.2 11.48 2.39 3.311 2 1 1 0 584.294 1087.6131 S374s TMT10 374 (R) sIPMPASR (C) S(0.99)IPMPAS(0.0)R s:Phosphorylated S IRS1 132786.8 2 6 229.1 423.14 HUMAN 1 3.2517 -21.9673 PPLPRPPTPKLEPKE-p Q8N6T7;T294-p PPLPRPPTPKLEPKE 0.826776350969775 0.0320849526179946 0.054 0.442 1.59199264055918 20.1541615125096 0.054 0.442 0.693107719671174 0.00965125629542907 0.41642228332165 3.90842016380035 Q8N6T7 SIRT6 Q8N6T7.T294.p_SIRT6 Q8N6T7_T294t _1_1_294_294 Q8N6T7 Q8N6T7|Q8N6T7-2 NAD-dependent protein deacetylase sirtuin-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19429.19642.5 11.38 4.48 10.545 3 1 1 0 644.3703 3137.8654 T294t TMT10 285 (R) ALPPLPRPPtPKLEPKEESPTR (I) ALPPLPRPPT(0.99)PKLEPKEES(0.0)PT(0.0)R K:TMT10,t:Phosphorylated T SIRT6 39460.5 6 2 1763.1 116.79 HUMAN 1 1.592 20.1542 PPLPRQQSTSSDRVS-p Q12965;S1002-p PPLPRQQSTSSDRVS 0.175358480804402 0.0710794174189239 0.288 -0.422 15.0530568252527 15.2668500675946 0.288 -0.422 0.0312387981899756 0.0297382215919049 2.88840796047651 -2.92669896329004 Q12965 MYO1E Q12965.S1002.p_MYO1E Q12965_S1002s _1_1_1002_1002 Q12965 Q12965 Unconventional myosin-Ie HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18937.18937.5 15.52 12.49 1.131 7 1 1 0 780.4046 3818.0197 S1002s TMT10 1000 (R) QQsTSSDRVSQTPESLDFLKVPDQGAAGVRR (Q) QQS(0.99)T(0.0)S(0.0)S(0.0)DRVS(0.0)QT(0.0)PES(0.0)LDFLKVPDQGAAGVRR K:TMT10,s:Phosphorylated S MYO1E 127630.1 5 2 2895.1 66.64 HUMAN 1 15.0531 -15.2669 PPLPRSNSLPHSAVS-p A0A088AWN2;S465-p PPLPRSNSLPHSAVS 0.337842177939104 0.701291439686952 -0.135666666666667 0.057 8.77741439800983 2.11812066081139 -0.135666666666667 0.057 0.132513022576537 0.614027658228548 -1.76983304424668 0.534741207513605 A0A088AWN2 NotFound A0A088AWN2.S465.p_NotFound A0A088AWN2_S465s _1_1_465_465 A0A088AWN2 A0A088AWN2|Q8TBZ3-7|Q8TBZ3-2|Q8TBZ3-6|Q8TBZ3-5|Q8TBZ3-4 WD repeat-containing protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8216.8216.2 18.54 15.15 2.354 5 1 1 0 997.5107 1914.0445 S465s TMT10 463 (R) SNsLPHSAVSNAGSK (S) S(0.0)NS(0.99)LPHS(0.0)AVS(0.0)NAGS(0.0)K K:TMT10,s:Phosphorylated S WDR20 68387.6 6 4 2446.1 83.15 HUMAN 1 -8.7774 2.1181 PPLQRSSSLIQLTSQ-p O95639;S202-p PPLQRSSSLIQLTSQ 0.236848672543821 0.353981364800064 0.187333333333333 0.093 11.985810383119 5.98048643751906 0.187333333333333 0.093 0.063302223025506 0.252319814236776 2.32981799310132 1.2807828482136 O95639 CPSF4 O95639.S202.p_CPSF4 O95639_S202s _1_1_202_202 O95639 O95639 Cleavage and polyadenylation specificity factor subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16206.16206.2 18.86 18.86 1.234 7 1 1 0 1142.5609 2204.1469 S202s TMT10 200 (R) SSsLIQLTSQNSSPNQQR (T) S(0.0)S(0.0)S(0.99)LIQLT(0.0)S(0.0)QNS(0.0)S(0.0)PNQQR s:Phosphorylated S CPSF4 31281.2 2 1 4234.1 35.01 HUMAN 1 11.9858 5.9805 PPLQSARSLPGPAPC-p Q01433;S100-p PPLQSARSLPGPAPC 0.0805026402883235 0.673938544852609 0.404 -0.166666666666667 23.3604585067636 2.34198247978671 0.404 -0.166666666666667 0.00461268873489603 0.583178832374227 4.64016031131111 -0.583199663606124 Q01433 AMPD2 Q01433.S100.p_AMPD2 Q01433_S100s _1_1_100_100 Q01433 Q01433|Q01433-2 AMP deaminase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16198.16198.3 11.47 11.47 99 1 1 1 0 450.2342 1268.7234 S100s Hydrogen 100 (R) sLPGPAPCLK (H) S(1.0)LPGPAPCLK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S AMPD2 101484.8 1 1 1735.1 118.63 HUMAN 1 23.3605 -2.342 PPLQWRYSEVSFMEL-p Q9NSY0;S361-p PPLQWRYSEVSFMEL 0.164299000896458 0.159161450525515 -0.264 0.262666666666667 15.7108874733614 10.5011095031711 -0.264 0.262666666666667 0.0268479575616806 0.0891023277069053 -3.01287241241436 2.06803695271323 Q9NSY0 NRBP2 Q9NSY0.S361.p_NRBP2 Q9NSY0_S361s _1_1_361_361 Q9NSY0 Q9NSY0|Q9NSY0-4|Q9NSY0-2 Nuclear receptor-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27288.27288.3 11.17 11.17 1.711 3 1 1 0 629.307 1805.9396 S361s TMT10 360 (R) YsEVSFMELDK (F) Y(0.0)S(0.99)EVS(0.0)FMELDK K:TMT10,s:Phosphorylated S NRBP2 58315.5 1 2 2343.1 87.17 HUMAN 1 -15.7109 10.5011 PPLRKAYSFDRNLGQ-p Q58EX7;S677-p PPLRKAYSFDRNLGQ 0.4319622910657 0.276787387394678 0.129 0.107 6.71196138346953 7.3503980429386 0.129 0.107 0.213208179373973 0.184060329734053 1.41049326321955 1.52177805504278 Q58EX7 PLEKHG4 Q58EX7.S677.p_PLEKHG4 Q58EX7_S677s _1_1_677_677 Q58EX7 Q58EX7 Puratrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13409.13409.5 18.94 16.41 1.238 5 1 1 0 722.7287 3529.6473 S677s TMT10 675 (K) AYsFDRNLGQSLSEPACHCHHAATIAACR (R) AY(0.0)S(0.99)FDRNLGQS(0.0)LS(0.0)EPACHCHHAAT(0.0)IAACR C:Carbamidomethylation,s:Phosphorylated S PLEKHG4 132511.8 1 2 5077.1 23.22 HUMAN 1 6.712 7.3504 PPLRNVASEGEGQIL-p Q9UHF7-2;S27-p PPLRNVASEGEGQIL 0.17581060681965 0.665386919340372 0.216666666666667 -0.0636666666666666 15.0106609022172 2.42194914979862 0.216666666666667 -0.0636666666666666 0.0315452453647774 0.572539013037644 2.88045087248574 -0.600267578039534 Q9UHF7 TRPS1 Q9UHF7.2.S27.p_TRPS1 Q9UHF7-2_S27s _1_1_27_27 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21620.21620.2 19.17 19.17 8.97 3 1 1 0 1248.6366 2416.2972 S27s TMT10 24 (R) NVAsEGEGQILEPIGTESK (V) NVAS(0.99)EGEGQILEPIGT(0.0)ES(0.0)K K:TMT10,s:Phosphorylated S TRPS1 145246 4 1 14.1 1150.14 HUMAN 1 15.0107 -2.4219 PPLSKMGSLDSKDCF-p Q15596;S579-p PPLSKMGSLDSKDCF 0.0866557243462627 0.00510328312178645 -0.632 0.691 22.6909332477047 33.3642630062025 -0.632 0.691 0.00538154127104928 0.000460864970422264 -4.48174196358008 7.5110097688056 Q15596 NCOA2 Q15596.S579.p_NCOA2 Q15596_S579s _1_1_579_579 Q15596 Q15596|E7EWM1 Nuclear receptor coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12392.12392.2 9.88 4.37 2.462 2 1 1 0 638.324 1195.6757 S579s TMT10 577 (K) MGsLDSK (D) MGS(0.99)LDS(0.0)K K:TMT10,s:Phosphorylated S NCOA2 160009.7 1 8 290.1 381.81 HUMAN 1 -22.6909 33.3643 PPLSPVGTTPVKLKR-p Q9BVC5;T197-p PPLSPVGTTPVKLKR 0.354637573366403 0.00320981770772267 0.138666666666667 -1.04633333333333 8.36688016044827 37.3696679961399 0.138666666666667 -1.04633333333333 0.145650501378428 0.000183245450214192 1.69875237755687 -9.00893138069545 Q9BVC5 C2orf49 Q9BVC5.T197.p_C2orf49 Q9BVC5_S193sT197tT198t_3_3_193_198 Q9BVC5 Q9BVC5|Q9BVC5-2|C9J4K0 Ashwin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17675.17675.4 8.65 9.54 1.863 6 3 3 0 804.9375 2976.8267 S193s T197t T198t TMT10 181 (R) KSPSGPVKSPPLsPVGttPVK (L) KS(0.0)PS(0.0)GPVKS(0.0)PPLS(0.99)PVGT(0.99)T(0.99)PVK K:TMT10,s:Phosphorylated S,t:Phosphorylated T C2orf49 25915 6 9 1142.1 173.17 HUMAN 1 8.3669 -37.3697 PPLTRSNTANRLMKT-p P28290;T291-p PPLTRSNTANRLMKT 0.988593353390701 0.0898784221863972 -0.00233333333333334 -0.245333333333333 0.10145188827397 13.8474105306762 -0.00233333333333335 -0.245333333333333 0.976910575745771 0.0412343304416681 -0.0303044510170463 -2.6633687100052 P28290 SSFA2 P28290.T291.p_SSFA2 P28290_T291t_1_1_291_291 P28290 P28290|P28290-3|E9PHV5|P28290-2 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3893.3893.3 8.49 3.05 2.384 4 1 1 0 822.0774 2367.2652 T291t N293n M296m Hydrogen 279 (K) ETDPPPPLTRSNtAnRLmK (T) ET(0.0)DPPPPLT(0.0)RS(0.0)N(0.0)T(0.99)AN(0.99)RLM(1.0)K K:TMT10-Lys-Only,t:Phosphorylated T,n:Deamidated,m:Oxidized methionine SSFA2 139638.7 4 9 73.1 652.35 HUMAN 1 -0.1015 -13.8474 PPLYQRVSPPQPPPP-p Q15637-5;S112-p PPLYQRVSPPQPPPP 0.98090727141703 0.80267473314561 0.00399999999999999 0.028 0.165813263437343 1.33615527704039 0.00399999999999999 0.028 0.962539750106375 0.735164406636505 0.049180461367252 0.356159570211142 Q15637 SF1 Q15637.5.S112.p_SF1 Q15637-5_S112s _1_1_112_112 Q15637-5 Q15637-5 Isoform 5 of Splicing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12424.12424.3 15.6 13.06 99 1 1 1 0 687.3873 1980.1795 S112s TMT10 111 (R) VsPPQPPPPQPPRK (D) VS(1.0)PPQPPPPQPPRK K:TMT10,s:Phosphorylated S SF1 71978.9 5 2 1138.2 173.35 HUMAN 1 0.1658 1.3362 PPMPASQSVPQDLAH-p Q53SF7;S343-p PPMPASQSVPQDLAH 0.0683636000573323 0.16067471249406 0.596333333333333 -0.237333333333333 25.1339732988633 10.4451104716249 0.596333333333333 -0.237333333333333 0.00306621546754816 0.0902586748051278 5.07778831824338 -2.05828427996802 Q53SF7 COBLL1 Q53SF7.S343.p_COBLL1 Q53SF7_S343s _1_1_343_343 Q53SF7 A0A0D9SG04|Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4|A0A0B4J1Z0 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21637.21637.5 23.72 21.48 2.227 3 1 1 0 767.2103 3752.0504 S343s TMT10 332 (R) RAPLPPMPASQsVPQDLAHIQERPASCIVK (S) RAPLPPMPAS(0.0)QS(0.99)VPQDLAHIQERPAS(0.0)CIVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S COBLL1 132526.1 1 9 163.1 494.83 HUMAN 1 25.134 -10.4451 PPNKLWDSSRDISR_-p P49760;S493-p PPNKLWDSSRDISR_ 0.287097146722783 0.0637261520224248 -0.227333333333333 -0.223333333333333 10.2228466759543 15.9213853910233 -0.227333333333333 -0.223333333333333 0.094998190360335 0.0255776983310784 -2.0204545219542 -3.05096727906692 P49760 CLK2 P49760.S493.p_CLK2 P49760_S493s _1_1_493_493 P49760 P49760|P49760-3|B1AVT0 Dual specificity protein kinase CLK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13005.13005.3 11.33 11.33 1.273 3 1 1 0 515.2547 1463.7804 S493s TMT10 490 (K) LWDsSRDISR (-) LWDS(0.99)S(0.0)RDIS(0.0)R s:Phosphorylated S CLK2 60545.5 2 6 1587.1 129.39 HUMAN 1 -10.2228 -15.9214 PPNPEDRSPSPEPIY-p Q15637-6;S80-p PPNPEDRSPSPEPIY 0.0973600331101722 0.0822101506802639 -0.370333333333333 0.310333333333333 21.4384887496467 14.3783369763038 -0.370333333333333 0.310333333333333 0.0071804411153872 0.036489364720671 -4.19469354422568 2.76093962576921 Q15637 SF1 Q15637.6.S80.p_SF1 Q15637-6_S80sS82s_2_2_80_82 Q15637-6 Q15637-5|Q15637-2|Q15637-3|Q15637-7|Q15637-6|Q15637-4 Isoform 6 of Splicing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19561.19561.5 16.74 12.07 4.595 5 2 2 0 631.8898 2995.4846 S80s S82s Hydrogen 67 (R) TGDLGIPPNPEDRsPsPEPIYNSEGK (R) T(0.0)GDLGIPPNPEDRS(0.99)PS(0.99)PEPIY(0.0)NS(0.0)EGK K:TMT10-Lys-Only,s:Phosphorylated S SF1 62173.2 58 11 1138.1 173.35 HUMAN 1 -21.4385 14.3783 PPNPPGPSPKALAKM-p M0QXA7;S423-p PPNPPGPSPKALAKM 0.927554876256796 0.00227464949884667 0.0143333333333333 -0.751 0.646326649335749 40.8273628309183 0.0143333333333333 -0.749667380266988 0.861722306203108 8.2653969743762e-05 0.182647978308385 -10.5098332840603 M0QXA7 WIZ M0QXA7.S423.p_WIZ M0QXA7_S423s _1_1_423_423 M0QXA7 O95785|M0QXA7|O95785-3|O95785-4|B9EGQ5|O95785-2 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7318.7318.4 14.83 12.51 14.71 3 1 1 0 553.0446 2129.1868 S423s TMT10 409 (R) TQSRPGGPPNPPGPsPK (A) T(0.0)QS(0.0)RPGGPPNPPGPS(0.99)PK K:TMT10,s:Phosphorylated S WIZ 104190.1 9 9 195.1 461.51 HUMAN 1 0.6463 -40.8274 PPPAQDLSPCQDLPA-p P49796;S777-p PPPAQDLSPCQDLPA 0.928168473454968 0.78008302167641 -0.0153333333333333 0.0466666666666667 0.641188158101852 1.49266911980451 -0.0153333333333334 0.0466666666666667 0.862742483357069 0.709141804285983 -0.181282819970256 0.39322745429994 P49796 RGS3 P49796.S777.p_RGS3 P49796_S777s _1_1_777_777 P49796 P49796|P49796-6|P49796-4|P49796-1 Regulator of G-protein signaling 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24184.24184.5 19.62 19.62 10.928 2 1 1 0 905.4503 4443.2365 S777s TMT10 763 (K) DVPPCQEPPPAQDLsPCQDLPAGQEPLPHQDPLLTK (D) DVPPCQEPPPAQDLS(0.99)PCQDLPAGQEPLPHQDPLLT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RGS3 134216.1 1 4 1029.1 186.27 HUMAN 1 -0.6412 1.4927 PPPARSGSGGGSAKE-p Q9H4A3-7;S185-p PPPARSGSGGGSAKE 0.849932017970877 0.7215116744801 0.0283333333333333 0.0626666666666667 1.36768078723038 1.95399167742562 0.0283333333333333 0.0626666666666667 0.729847158072138 0.63767711643988 0.363723838414539 0.498531492349711 Q9H4A3 WNK1 Q9H4A3.7.S185.p_WNK1 Q9H4A3-7_S185s _1_1_185_185 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2|F5GWT4|F6UYG0 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4447.4447.2 10.57 5.07 2.134 3 1 1 0 1007.4851 1933.998 S185s TMT10 183 (R) SGsGGGSAKEPQEER (S) S(0.0)GS(0.99)GGGS(0.0)AKEPQEER K:TMT10,s:Phosphorylated S WNK1 301202.7 7 7 162.1 495.27 HUMAN 1 1.3677 1.954 PPPEDLRSPSRFYPV-p Q5VTI5;S356-p PPPEDLRSPSRFYPV 0.259441883712572 0.322929562423504 0.165 -0.107666666666667 11.1241059346881 6.48963436592206 0.164098521945315 -0.107666666666667 0.0771950417685514 0.224407084495721 2.17786603278882 -1.37099457154471 Q5VTI5 NotFound Q5VTI5.S356.p_NotFound Q5VTI5_S356s _1_1_356_356 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16802.16802.4 10.37 10.37 1.601 4 1 1 0 617.0694 2385.2876 S356s TMT10 347 (R) GVPPPEDLRsPSRFYPVSR (R) GVPPPEDLRS(0.99)PS(0.0)RFY(0.0)PVS(0.0)R s:Phosphorylated S PLEKHA6 119745.7 4 12 52.1 743.36 HUMAN 1 11.1241 -6.4896 PPPEQCLSDDEITMM-p P21675-4;S307-p PPPEQCLSDDEITMM 0.90552186362789 0.0408709878295331 0.0176666666666667 0.32 0.847536409325235 18.612646888172 0.0176666666666667 0.32 0.822709209864646 0.013763703588022 0.235184799619634 3.58427091553943 P21675 TAF1 P21675.4.S307.p_TAF1 P21675-4_S307s _1_1_307_307 P21675-4 P21675-3|P21675-7|P21675-6|P21675-8|P21675-11|P21675-10|P21675-4|P21675-12|P21675-2|P21675-9|P21675-5 Isoform 4 of Transcription initiation factor TFIID subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33147.33147.4 19.99 16.56 2.215 6 1 1 0 1030.4773 4038.9216 S307s TMT10 290 (K) SLWNYDYAPPPPPEQCLsDDEITMMAPVESK (F) S(0.0)LWNY(0.0)DY(0.0)APPPPPEQCLS(0.99)DDEIT(0.0)MMAPVES(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TAF1 217873.7 11 2 1230.1 163.84 HUMAN 1 0.8475 18.6126 PPPESVDTPTSTKQW-p P46013;T1139-p PPPESVDTPTSTKQW 0.258855999857316 0.104849704441111 0.212666666666667 -0.292666666666667 11.154957402442 12.9391712486831 0.212666666666667 -0.292666666666667 0.0766486058166054 0.0508256422377154 2.18327906653242 -2.49874836270636 P46013 MKI67 P46013.T1139.p_MKI67 P46013_S1136sT1139t_2_2_1136_1139 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14539.14539.4 7.39 7.39 1.141 6 2 2 0 691.348 2602.4365 S1136s T1139t TMT10 1127 (K) IACKSPPPEsVDtPTSTK (Q) IACKS(0.0)PPPES(0.99)VDT(0.99)PT(0.0)S(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T MKI67 360912.4 2 100 5.1 1918.46 HUMAN 1 11.155 -12.9392 PPPFDYGSGDEDGKS-p Q8TDI0;S558-p PPPFDYGSGDEDGKS 0.503045331857844 0.0791725843614057 0.097 -0.199 5.50492798534329 14.6184103559247 0.097 -0.199 0.281518669613687 0.0345270095103071 1.19583698082951 -2.80541157542982 Q8TDI0 CHD5 Q8TDI0.S558.p_CHD5 Q8TDI0_S558s _1_1_558_558 Q8TDI0 Q8TDI0|F2Z2R5 Chromodomain-helicase-DNA-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16079.16079.4 19.8 17.27 4.847 3 1 1 0 889.1762 3473.7188 S558s TMT10 545 (R) KNDMDEPPPFDYGsGDEDGKSEK (R) KNDMDEPPPFDY(0.0)GS(0.99)GDEDGKS(0.0)EK K:TMT10,s:Phosphorylated S CHD5 224643 2 3 1884.1 109.13 HUMAN 1 5.5049 -14.6184 PPPFLGPSPPDRCAG-p J3KNZ9;S871-p PPPFLGPSPPDRCAG 0.729035669255208 0.247399689508439 -0.0776666666666667 0.202 2.60537144922438 7.99224010005488 -0.0776666666666667 0.202 0.548861609825641 0.158772758413152 -0.639052204632361 1.6332972781713 J3KNZ9 FBRS J3KNZ9.S871.p_FBRS J3KNZ9_S871s _1_1_871_871 J3KNZ9 J3KNZ9|Q9HAH7-1 Probable fibrosin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.37059.37059.5 26.14 25.88 2.273 2 1 1 0 959.9012 4715.5008 S871s TMT10 829 (K) EEAAAAAAAAAAAAAAAAAAATGPQGLHLLFERPRPPPFLGPsPPDR (C) EEAAAAAAAAAAAAAAAAAAAT(0.0)GPQGLHLLFERPRPPPFLGPS(0.99)PPDR s:Phosphorylated S FBRS 104109.7 1 10 767.1 229.08 HUMAN 1 -2.6054 7.9922 PPPGAPPSPAPARFT-p P48634;S1147-p PPPGAPPSPAPARFT 0.911753399332893 0.263997635678202 0.0193333333333333 -0.18 0.781125666998325 7.61965412896329 0.0193333333333333 -0.18 0.835386462670327 0.172995412684214 0.218037529440273 -1.56862987543744 P48634 PRRC2A P48634.S1147.p_PRRC2A P48634_S1147s _1_1_1147_1147 P48634 P48634 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22221.22427.4 24.58 24.58 11.588 3 1 1 0 657.6006 2547.4132 S1147s TMT10 1129 (K) EGTLTQVPLAPPPPGAPPsPAPAR (F) EGT(0.0)LT(0.0)QVPLAPPPPGAPPS(0.99)PAPAR s:Phosphorylated S PRRC2A 229315.4 5 22 36.1 882.05 HUMAN 1 0.7811 -7.6197 PPPGERRSRSPRKPI-p Q9UQ35;S2675-p PPPGERRSRSPRKPI 0.785321801685938 0.0644825620686454 -0.045 0.325 2.02149853166807 15.8514894785712 -0.045 0.325 0.627841684868893 0.0259926795204503 -0.51355779757063 3.03760464261713 Q9UQ35 SRRM2 Q9UQ35.S2675.p_SRRM2 Q9UQ35_S2675sS2677s_2_2_2675_2677 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6685.6685.4 11.29 7.85 7.863 3 2 2 0 450.982 1640.9758 S2675s S2677s Hydrogen 2675 (R) sRsPRKPIDSLR (D) S(0.99)RS(0.99)PRKPIDS(0.0)LR K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 3 241 2.1 3310.34 HUMAN 1 -2.0215 15.8515 PPPGTSRSAPGTPGT-p Q16584;S748-p PPPGTSRSAPGTPGT 0.193689413854405 0.0698874416256591 0.219 0.298666666666667 13.9185710003773 15.3685802121928 0.219 0.298666666666667 0.0405641985656299 0.029049721875945 2.67798013235143 2.94588826926267 Q16584 MAP3K11 Q16584.S748.p_MAP3K11 Q16584_S748s _1_1_748_748 Q16584 Q16584|Q16584-2|E9PID4 Mitogen-activated protein kinase kinase kinase 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3939.3939.2 11.79 11.79 4.305 3 1 1 0 510.7295 940.4847 S748s Hydrogen 748 (R) sAPGTPGTPR (S) S(0.99)APGT(0.0)PGT(0.0)PR s:Phosphorylated S MAP3K11 93313.9 2 14 536.1 278.53 HUMAN 1 13.9186 15.3686 PPPKARKSGIPTSEP-p Q9H7D0;S1860-p PPPKARKSGIPTSEP 0.151446699968719 0.00432767968698182 -0.451666666666667 -0.762333333333333 16.5079136958601 34.7403468039632 -0.451666666666666 -0.762333333333334 0.0223464546475148 0.00033571080513272 -3.16633275234044 -7.99911354972678 Q9H7D0 DOCK5 Q9H7D0.S1860.p_DOCK5 Q9H7D0_S1860s _1_1_1860_1860 Q9H7D0 Q9H7D0 Dedicator of cytokinesis protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8198.8198.3 8.37 8.37 2.588 4 1 1 0 651.6797 1873.0543 S1860s TMT10 1857 (K) ARKsGIPTSEPGSQ (-) ARKS(0.99)GIPT(0.0)S(0.0)EPGS(0.0)Q K:TMT10,s:Phosphorylated S DOCK5 216331.8 1 13 828.1 217.17 HUMAN 1 -16.5079 -34.7403 PPPKRRASPSPPPKR-p A9Z1X7;S635-p PPPKRRASPSPPPKR 0.435612446333817 0.0363737336036002 0.152666666666667 0.315 6.64489570822166 19.3685445708088 0.152666666666667 0.315 0.216526187543258 0.0115649974918434 1.3986993935379 3.74136386776371 A9Z1X7 NotFound A9Z1X7.S635.p_NotFound A9Z1X7_S635s _1_1_635_635 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4026.4026.2 11.57 11.57 2.248 2 1 1 0 623.3323 1165.6891 S635s Hydrogen 633 (R) RAsPSPPPK (R) RAS(0.99)PS(0.0)PPPK K:TMT10-Lys-Only,s:Phosphorylated S SRRM1 103445.7 7 30 8.1 1346.57 HUMAN 1 6.6449 19.3685 PPPKRRVSHSPPPKQ-p A9Z1X7;S645-p PPPKRRVSHSPPPKQ 0.397345916765322 0.251023114300276 0.126333333333333 0.114 7.39794398238867 7.90769477888721 0.126333333333333 0.114 0.182056253724324 0.161893913729553 1.53050697617085 1.61863712438287 A9Z1X7 NotFound A9Z1X7.S645.p_NotFound A9Z1X7_S645sS647s_2_2_645_647 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3106.3106.2 11.59 11.59 99 2 2 2 0 697.3333 1233.7265 S645s S647s Hydrogen 643 (R) RVsHsPPPK (Q) RVS(1.0)HS(1.0)PPPK K:TMT10-Lys-Only,s:Phosphorylated S SRRM1 103445.7 46 67 8.1 1346.57 HUMAN 1 7.3979 7.9077 PPPKTNLTPGQSDSA-p Q9Y2M0;T110-p PPPKTNLTPGQSDSA 0.407878856431238 0.0014286003693118 -0.152333333333333 -1.07266666666667 7.18921203018679 45.958386068406 -0.152333333333333 -1.07266666666667 0.191019980758058 2.53607091383453e-05 -1.49409482935722 -13.1658242638753 Q9Y2M0 FAN1 Q9Y2M0.T110.p_FAN1 Q9Y2M0_T110t _1_1_110_110 Q9Y2M0 Q9Y2M0|Q9Y2M0-2|H3BQ24 Fanconi-associated nuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6807.6807.3 11.67 6.29 1.886 4 1 1 0 638.3344 1833.023 T110t TMT10 107 (K) TNLtPGQSDSAKR (E) T(0.0)NLT(0.99)PGQS(0.0)DS(0.0)AKR K:TMT10,t:Phosphorylated T FAN1 116048.4 1 1 1860.1 110.7 HUMAN 1 -7.1892 -45.9584 PPPKTRHSPTPQQSN-p A9Z1X7;S409-p PPPKTRHSPTPQQSN 0.0163284757072266 0.0358943447129582 0.912 0.554 41.7958595498576 19.4497467534515 0.912 0.554 6.613236362368e-05 0.011350770025488 10.9962834879055 3.75844847547438 A9Z1X7 NotFound A9Z1X7.S409.p_NotFound A9Z1X7_S409sT411t_2_2_409_411 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3106.3106.4 7.81 7.81 2.164 4 2 2 0 450.2051 1637.8669 S409s T411t TMT10 406 (K) TRHsPtPQQSNR (T) T(0.0)RHS(0.99)PT(0.99)PQQS(0.0)NR s:Phosphorylated S,t:Phosphorylated T SRRM1 103445.7 17 56 8.1 1346.57 HUMAN 1 41.7959 19.4497 PPPLAPQSPQGGVMG-p P46937-9;S289-p PPPLAPQSPQGGVMG 0.476013173763736 0.213335367962269 0.1 -0.122333333333333 5.93693642288277 8.82674758885415 0.1 -0.122333333333333 0.254862745789697 0.13101627304587 1.2733211758527 -1.77774647475488 P46937 YAP1 P46937.9.S289.p_YAP1 P46937-9_S289s_1_1_289_289 P46937-9 P46937-9|P46937-8|P46937-2|P46937-7|P46937-6|P46937-3|P46937-5|P46937-4 Isoform 9 of Transcriptional coactivator YAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15627.15627.4 30.46 29.25 6.818 5 1 1 0 1046.7775 4088.117 S289s M295m TMT10 273 (R) ISQSAPVKQPPPLAPQsPQGGVmGGSNSNQQQQMR (L) IS(0.0)QS(0.0)APVKQPPPLAPQS(0.99)PQGGVM(0.99)GGS(0.0)NS(0.0)NQQQQM(0.0)R K:TMT10,s:Phosphorylated S,m:Oxidized methionine YAP1 54998.2 42 12 436.1 313.01 HUMAN 1 5.9369 -8.8267 PPPLDYGSGEDDGKS-p Q12873-3;S656-p PPPLDYGSGEDDGKS 0.235621777934373 0.174450666647121 -0.324666666666667 0.227333333333333 12.0236711613146 9.97362507014723 -0.324666666666667 0.227333333333333 0.0627527675280249 0.100609153039902 -2.33653387883519 1.97633174661059 Q12873 CHD3 Q12873.3.S656.p_CHD3 Q12873-3_S656s _1_1_656_656 Q12873-3 Q12873-3|Q12873-2 Isoform 3 of Chromodomain-helicase-DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15025.15025.5 19.52 15.74 3.221 3 1 1 0 701.9434 3425.7188 S656s TMT10 643 (R) KNDMDEPPPLDYGsGEDDGKSDK (R) KNDMDEPPPLDY(0.0)GS(0.99)GEDDGKS(0.0)DK K:TMT10,s:Phosphorylated S CHD3 234573.2 5 46 49.3 753.68 HUMAN 1 -12.0237 9.9736 PPPLPPPSPPGSGRG-p Q9H3P7;S43-p PPPLPPPSPPGSGRG 0.53706412572523 0.721778811170704 0.122333333333333 0.0996666666666667 4.99193520154778 1.95167217660213 0.122333333333333 0.0996666666666667 0.316815542910588 0.638017781060114 1.10257997463716 0.498015386412247 Q9H3P7 ACBD3 Q9H3P7.S43.p_ACBD3 Q9H3P7_S43s _1_1_43_43 Q9H3P7 Q9H3P7 Golgi resident protein GCP60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36196.36196.4 21.93 21.93 2 5 1 1 0 1236.132 4861.5371 S43s Acetyl 2 (M) AAVLNAERLEVSVDGLTLSPDPEERPGAEGAPLLPPPLPPPsPPGSGR (G) AAVLNAERLEVS(0.0)VDGLT(0.0)LS(0.0)PDPEERPGAEGAPLLPPPLPPPS(0.99)PPGS(0.0)GR s:Phosphorylated S ACBD3 60877.6 16 1 2173.1 94.52 HUMAN 1 4.9919 1.9517 PPPLRAPTPPPRRRS-p Q96L33;T18-p PPPLRAPTPPPRRRS 0.795295440219941 0.245239562838995 -0.0456666666666667 -0.161333333333333 1.92213513274165 8.04414788335455 -0.0456666666666667 -0.161333333333333 0.642371828816131 0.156886368969205 -0.491488416048971 -1.64229467257545 Q96L33 RHOV Q96L33.T18.p_RHOV Q96L33_T18t _1_1_18_18 Q96L33 Q96L33 Rho-related GTP-binding protein RhoV HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16708.16708.3 14.24 9.35 5.576 2 1 1 0 755.0594 2183.2022 T18t TMT10 5 (R) ELSEAEPPPLRAPtPPPR (R) ELS(0.0)EAEPPPLRAPT(0.99)PPPR t:Phosphorylated T RHOV 26730.2 3 1 4233.1 35.02 HUMAN 1 -1.9221 -8.0441 PPPLSPPSPSTPNHR-p Q6WCQ1-2;S292-p PPPLSPPSPSTPNHR 0.826605132693876 0.617149732966046 0.0316666666666667 0.0543333333333334 1.59540183733136 2.84972283360766 0.0316666666666667 0.0543333333333334 0.692563845988316 0.518833149762666 0.417212067401205 0.689626413048704 Q6WCQ1 MPRIP Q6WCQ1.2.S292.p_MPRIP Q6WCQ1-2_S292s _1_1_292_292 Q6WCQ1-2 Q6WCQ1-2|Q6WCQ1-3 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15876.15876.3 17.08 16.15 1.375 4 1 1 0 863.4275 2508.3044 S292s TMT10 279 (K) AEEQQLPPPLSPPsPSTPNHR (R) AEEQQLPPPLS(0.0)PPS(0.99)PS(0.0)T(0.0)PNHR s:Phosphorylated S MPRIP 118899.7 2 5 204.1 449.03 HUMAN 1 1.5954 2.8497 PPPMWRRSPPRMRRR-p Q15287;S266-p PPPMWRRSPPRMRRR 0.483994680222988 0.818432541397772 -0.128333333333333 -0.0376666666666666 5.80560249706295 1.21712951973988 -0.128333333333333 -0.0376666666666667 0.262687707433417 0.755591472735785 -1.24985477967704 -0.327456726344571 Q15287 RNPS1 Q15287.S266.p_RNPS1 Q15287_S266s _1_1_266_266 Q15287 Q15287|Q15287-2|Q15287-3|H3BV80|H3BPG5 RNA-binding protein with serine-rich domain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17781.17781.4 8.63 8.63 99 1 1 1 0 507.5163 1947.0771 S266s TMT10 256 (R) MLPPPPMWRRsPPR (M) MLPPPPMWRRS(1.0)PPR s:Phosphorylated S RNPS1 34207.7 17 4 2314.1 88.32 HUMAN 1 -5.8056 -1.2171 PPPPAAGSRRVRLQL-p C9JI98;S154-p PPPPAAGSRRVRLQL 0.800189174673997 0.52448808202062 -0.0573333333333334 -0.197 1.86537772161076 3.7668215784728 -0.0573333333333334 -0.197 0.650822004036368 0.420066300656991 -0.478778176853874 -0.872144904364566 C9JI98 TMEM238 C9JI98.S154.p_TMEM238 C9JI98_S154s _1_1_154_154 C9JI98 C9JI98 Transmembrane protein 238 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4026.4026.3 7.35 7.35 99 1 1 1 0 462.5801 1305.7589 S154s TMT10 146 (R) APPPPAAGsRR (V) APPPPAAGS(1.0)RR s:Phosphorylated S TMEM238 18153.7 1 2 4240.1 34.92 HUMAN 1 -1.8654 -3.7668 PPPPAKGSIPISRLF-p Q99640;S60-p PPPPAKGSIPISRLF 0.324520848949951 0.0103650632025954 0.172666666666667 -0.593 9.15473606040528 27.858375390439 0.172666666666667 -0.593 0.12148604505669 0.00163742893657881 1.83515183757378 -5.79774575516365 Q99640 PKMYT1 Q99640.S60.p_PKMYT1 Q99640_S50sS60s_2_2_50_60 Q99640 B4DZM6|Q99640|Q99640-3|Q99640-2|A6NHV6 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19867.19867.4 7.13 7.13 1.115 3 2 2 0 558.8046 2072.2632 S50s S60s TMT10 50 (R) sLPPPPPAKGsIPISR (L) S(0.99)LPPPPPAKGS(0.99)IPIS(0.0)R K:TMT10,s:Phosphorylated S PKMYT1 55090.9 1 15 926.1 199.78 HUMAN 1 9.1547 -27.8584 PPPPPAPSPPPAPAT-p Q9UMN6;S632-p PPPPPAPSPPPAPAT 0.561272922260526 0.604437442554541 0.0816666666666667 -0.063 4.61735751586681 2.96685519065387 0.0816666666666667 -0.063 0.345353807484454 0.505026864795352 1.0334456910351 -0.713572618438743 Q9UMN6 KMT2B Q9UMN6.S632.p_KMT2B Q9UMN6_S632s _1_1_632_632 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20215.20428.4 16.17 16.17 3.5 4 1 1 0 707.8696 2748.4922 S632s TMT10 617 (R) ELPPPPPAPPPPPAPsPPPAPATSSR (R) ELPPPPPAPPPPPAPS(0.99)PPPAPAT(0.0)S(0.0)S(0.0)R s:Phosphorylated S KMT2B 297845.7 4 5 388.1 332.76 HUMAN 1 4.6174 -2.9669 PPPPPPATPRKNKAA-p A6NHB5;T828-p PPPPPPATPRKNKAA 0.45405174275597 0.00479967872381982 -0.115666666666667 -0.652 6.3265260183034 33.8733856250811 -0.115666666666667 -0.652 0.2329954275126 0.000409884445204557 -1.34252973949648 -7.68853486029979 A6NHB5 NotFound A6NHB5.T828.p_NotFound A6NHB5_T828t _1_1_828_828 A6NHB5 A6NHB5|Q14202|Q14202-2|A6NHN7 Zinc finger MYM-type protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11893.12102.3 19.28 19.28 5.567 4 1 1 0 805.7781 2335.3538 T828t TMT10 813 (R) SAPTAPTPPPPPPPAtPRK (N) S(0.0)APT(0.0)APT(0.0)PPPPPPPAT(0.99)PRK K:TMT10,t:Phosphorylated T ZMYM3 156426.3 4 11 331.1 357.99 HUMAN 1 -6.3265 -33.8734 PPPPPPRSREQRRNY-p C9JLR9;S574-p PPPPPPRSREQRRNY 0.56732930889055 0.0880168676165727 -0.116 -0.231666666666667 4.53367705191444 13.9707307833746 -0.116 -0.231666666666667 0.352072654582492 0.0400799269824187 -1.01786360620715 -2.68593902659505 C9JLR9 C11orf95 C9JLR9.S574.p_C11orf95 C9JLR9_S574s _1_1_574_574 C9JLR9 C9JLR9 Uncharacterized protein C11orf95 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16529.16529.4 9.19 5.97 99 1 1 1 0 1114.8004 4376.1745 S574s TMT10 542 (R) PAEEEEDEEDGQEPGGLALPPPPPPPPPPPPRsREQRR (N) PAEEEEDEEDGQEPGGLALPPPPPPPPPPPPRS(1.0)REQRR s:Phosphorylated S C11orf95 74051.9 1 1 6832.1 9.19 HUMAN 1 -4.5337 -13.9707 PPPPPSQSPEPTEPH-p Q9UIS9-12;S297-p PPPPPSQSPEPTEPH 0.345742246074052 0.146484559698897 0.131333333333333 0.171666666666667 8.5706033989589 10.9863503275248 0.131333333333333 0.171666666666667 0.13897595277444 0.0796828698582662 1.7340312646745 2.15274905540584 Q9UIS9 MBD1 Q9UIS9.12.S297.p_MBD1 Q9UIS9-12_S297s _1_1_297_297 Q9UIS9-12 Q9UIS9-12|Q9UIS9-9|Q9UIS9-10|A0A0A0MS90|Q9UIS9-5|Q9UIS9-6|Q9UIS9-7|Q9UIS9-11|Q9UIS9-4 Isoform 12 of Methyl-CpG-binding domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6708.6916.4 26.26 22.75 2.484 3 1 1 0 758.6421 2951.5801 S297s TMT10 282 (R) RRPGAQPLPPPPPSQsPEPTEPHPR (A) RRPGAQPLPPPPPS(0.0)QS(0.99)PEPT(0.0)EPHPR s:Phosphorylated S MBD1 74521.1 9 3 1033.1 185.84 HUMAN 1 8.5706 10.9864 PPPPRMRSPQPARPG-p Q8N3V7-2;S804-p PPPPRMRSPQPARPG 0.130891397101015 0.0077409923362193 0.293666666666667 0.521333333333333 18.2692148137611 30.140945835827 0.293666666666667 0.521333333333333 0.0148963037230058 0.00096806700113775 3.51695550755855 6.4648109552162 Q8N3V7 SYNPO Q8N3V7.2.S804.p_SYNPO Q8N3V7-2_S804s _1_1_804_804 Q8N3V7-2 Q8N3V7-2 Isoform 2 of Synaptopodin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16571.16571.4 18.6 18.6 4.786 2 1 1 0 678.6097 2631.4503 S804s TMT10 802 (R) MRsPQPARPGSAAVPGAAFAPIPR (S) MRS(0.99)PQPARPGS(0.0)AAVPGAAFAPIPR s:Phosphorylated S SYNPO 96794.1 3 14 947.1 196.99 HUMAN 1 18.2692 30.1409 PPPQDYESDDDSYEV-p Q8IVP5;S13-p PPPQDYESDDDSYEV 0.964995630930211 0.0133609330002596 0.013 0.504333333333333 0.299103278567116 26.0663650548048 0.013 0.504333333333333 0.933447016931343 0.00247379378742998 0.0874656438122138 5.31202222862936 Q8IVP5 FUNDC1 Q8IVP5.S13.p_FUNDC1 Q8IVP5_S13s _1_1_13_13 Q8IVP5 Q8IVP5 FUN14 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27390.27390.2 21.26 16.32 3.424 6 1 1 0 1570.6715 3060.3796 S13s TMT10 5 (R) NPPPQDYEsDDDSYEVLDLTEYAR (R) NPPPQDY(0.0)ES(0.99)DDDS(0.0)Y(0.0)EVLDLT(0.0)EY(0.0)AR s:Phosphorylated S FUNDC1 17234.3 11 1 3691.1 45.3 HUMAN 1 0.2991 26.0664 PPPQSPGSPGTGQDE-p Q9UKS6;S344-p PPPQSPGSPGTGQDE 0.956607421143909 0.0722857762361749 0.009 -0.207 0.378376692906909 15.162020384109 0.009 -0.207 0.916563019276783 0.0304647740623307 0.109749980009649 -2.90697172216082 Q9UKS6 PACSIN3 Q9UKS6.S344.p_PACSIN3 Q9UKS6_S344sT347t_2_2_344_347 Q9UKS6 Q9UKS6 Protein kinase C and casein kinase substrate in neurons protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22040.22040.5 13.57 13.57 1.101 11 2 2 0 1031.2855 4992.4387 S344s T347t TMT10 319 (R) SPDEVTLTSIVPTRDGTAPPPQSPGsPGtGQDEEWSDEESPRK (A) S(0.0)PDEVT(0.0)LT(0.0)S(0.0)IVPT(0.0)RDGT(0.0)APPPQS(0.0)PGS(0.99)PGT(0.99)GQDEEWS(0.0)DEES(0.0)PRK K:TMT10,s:Phosphorylated S,t:Phosphorylated T PACSIN3 48828.3 8 10 547.1 275.62 HUMAN 1 0.3784 -15.162 PPPQVPVSPGPPKDS-p Q9C0E8;S194-p PPPQVPVSPGPPKDS 0.963046342073043 0.0660372558490866 0.00766666666666665 -0.213 0.315430896668233 15.6980924425763 0.00766666666666665 -0.213 0.92994424331783 0.0269271727000437 0.0920841238827649 -3.0083569894989 Q9C0E8 KIAA1715 Q9C0E8.S194.p_KIAA1715 Q9C0E8_S194s _1_1_194_194 Q9C0E8 Q9C0E8-4|Q9C0E8-2|Q9C0E8-3 Endoplasmic reticulum junction formation protein lunapark HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19198.19198.3 13.22 13.22 4.108 4 1 1 0 1000.1982 2918.614 S194s TMT10 175 (R) NLSPTPASPNQGPPPQVPVsPGPPK (D) NLS(0.0)PT(0.0)PAS(0.0)PNQGPPPQVPVS(0.99)PGPPK K:TMT10,s:Phosphorylated S LNPK 48081.4 2 3 1776.1 115.62 HUMAN 1 0.3154 -15.6981 PPPRAHGSFSHVRDA-p Q8N3D4;S1273-p PPPRAHGSFSHVRDA 0.283970102772373 0.0364204913303259 -0.167 -0.548333333333333 10.3148738430499 19.3594308792422 -0.167 -0.548333333333333 0.0930063531508551 0.011589292179649 -2.03647185129015 -3.73944896087056 Q8N3D4 EHBP1L1 Q8N3D4.S1273.p_EHBP1L1 Q8N3D4_S1273s _1_1_1273_1273 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12271.12271.4 15.79 8.79 1.189 2 1 1 0 548.5412 2111.1762 S1273s TMT10 1270 (R) AHGsFSHVRDADLLK (K) AHGS(0.99)FS(0.0)HVRDADLLK K:TMT10,s:Phosphorylated S EHBP1L1 162650.3 6 14 593.1 264.13 HUMAN 1 -10.3149 -19.3594 PPPRKRKSELEFETL-p Q5JSH3;S262-p PPPRKRKSELEFETL 0.0499167591004882 0.800885972705464 -0.666 -0.0286666666666667 28.7933189128879 1.34841043919918 -0.666 -0.0286666666666667 0.00132028627530884 0.733092803265083 -6.07322546981001 -0.359089072706727 Q5JSH3 WDR44 Q5JSH3.S262.p_WDR44 Q5JSH3_S262s _1_1_262_262 Q5JSH3 Q5JSH3|Q5JSH3-2|Q5JSH3-4 WD repeat-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21517.21517.5 16.07 13.77 3.231 3 1 1 0 649.1716 3161.8592 S262s TMT10 260 (K) RKsELEFETLKTPDIDVPK (E) RKS(0.99)ELEFET(0.0)LKT(0.0)PDIDVPK K:TMT10,s:Phosphorylated S WDR44 101935 5 9 95.1 607.92 HUMAN 1 -28.7933 -1.3484 PPPRRQLSAPHITRG-p A6ND36;S650-p PPPRRQLSAPHITRG 0.850978207153266 0.827950080485717 -0.0276666666666667 -0.0326666666666666 1.35594037547077 1.14692087147436 -0.0276666666666667 -0.0326666666666667 0.731822844841734 0.767905738150795 -0.360924183470454 -0.310305329886582 A6ND36 FAM83G A6ND36.S650.p_FAM83G A6ND36_S650s _1_1_650_650 A6ND36 A6ND36 Protein FAM83G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10244.10244.3 12.27 12.27 12.272 2 1 1 0 444.5726 1251.7371 S650s TMT10 648 (R) QLsAPHITR (G) QLS(0.99)APHIT(0.0)R s:Phosphorylated S FAM83G 91118.6 2 5 1966.1 104.97 HUMAN 1 -1.3559 -1.1469 PPPRRRASAPHGPLD-p Q8N4B1-4;S226-p PPPRRRASAPHGPLD 0.654942676621296 0.065596347473682 0.0886666666666667 0.223333333333333 3.44530864724449 15.7445072168771 0.0886666666666667 0.223333333333333 0.452344313688427 0.0266409236753782 0.809494967295793 3.01719539482022 Q8N4B1 FAM109A Q8N4B1.4.S226.p_FAM109A Q8N4B1-4_S226s _1_1_226_226 Q8N4B1-4 Q8N4B1-4|Q8N4B1-2 Isoform 4 of Sesquipedalian-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14673.14673.3 10.96 10.96 99 1 1 1 0 591.9481 1693.8591 S226s Hydrogen 224 (R) RAsAPHGPLDMAPFAR (L) RAS(1.0)APHGPLDMAPFAR s:Phosphorylated S FAM109A 28591.4 2 1 6557.1 10.96 HUMAN 1 3.4453 15.7445 PPPRRRRTPTPPPRR-p A9Z1X7;T581-p PPPRRRRTPTPPPRR 0.685814166852822 0.178499748371498 0.0896666666666667 0.331333333333333 3.07341423253746 9.84461621597176 0.0896666666666667 0.331333333333333 0.492786244724307 0.103642618888807 0.735284514963281 1.95395084641014 A9Z1X7 NotFound A9Z1X7.T581.p_NotFound A9Z1X7_T581tT583t_2_2_581_583 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2313.2521.3 9.6 9.6 99 2 2 2 0 413.1912 1077.6276 T581t T583t Hydrogen 579 (R) RRtPtPPPR (R) RRT(1.0)PT(1.0)PPPR t:Phosphorylated T SRRM1 103445.7 10 62 8.1 1346.57 HUMAN 1 3.0734 9.8446 PPPRRTHSLHQRGLA-p Q9P206-3;S458-p PPPRRTHSLHQRGLA 0.129811405438849 0.612861942449903 0.404 0.0776666666666667 18.3461299870988 2.88947148270459 0.404 0.0776666666666667 0.0146348070621515 0.514106212241987 3.53265714247167 0.697776004235967 Q9P206 KIAA1522 Q9P206.3.S458.p_KIAA1522 Q9P206-3_S458s _1_1_458_458 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.2981.2981.2 12.08 4.92 2.579 2 1 1 0 594.2979 1107.6221 S458s TMT10 456 (R) THsLHQR (G) T(0.0)HS(0.99)LHQR s:Phosphorylated S KIAA1522 108782.6 2 19 62.1 704.36 HUMAN 1 18.3461 2.8895 PPPSGKFS_______-p J9JIE6;S239-p PPPSGKFS_______ 0.852502980831778 0.188277658963683 -0.0266666666666667 -0.140333333333333 1.34333518452421 9.53832106853606 -0.0266666666666667 -0.140333333333333 0.733950011376893 0.111216159279642 -0.357913527323617 -1.90087110590973 J9JIE6 TMCO1 J9JIE6.S239.p_TMCO1 J9JIE6_S239s _1_1_239_239 J9JIE6 J9JIE6|Q9UM00|Q9UM00-2|J3QQY2 Calcium load-activated calcium channel HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21999.21999.2 11.34 11.34 2.619 2 1 1 0 1041.5433 2002.1162 S239s TMT10 224 (K) QAGGFLGPPPPSGKFs (-) QAGGFLGPPPPS(0.0)GKFS(0.99) K:TMT10,s:Phosphorylated S TMCO1 27477.9 3 2 4473.1 30.94 HUMAN 1 -1.3433 -9.5383 PPPSKPRSPNPAAPA-p Q9P206-3;S631-p PPPSKPRSPNPAAPA 0.529751444490288 0.238271856403036 -0.107666666666667 0.286666666666667 5.10589730056669 8.20535520243931 -0.107666666666667 0.286666666666667 0.308610195691746 0.151169605512684 -1.12342939759893 1.67022288978253 Q9P206 KIAA1522 Q9P206.3.S631.p_KIAA1522 Q9P206-3_S631s_1_1_631_631 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.31472.31472.4 16.82 16.82 1.82 12 1 1 0 1224.6377 4814.5665 S631s N633n Hydrogen 631 (R) sPnPAAPALAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQESPVISK (D) S(0.99)PN(1.0)PAAPALAAPAVVPGPVS(0.0)T(0.0)T(0.0)DAS(0.0)PQS(0.0)PPT(0.0)PQT(0.0)T(0.0)LT(0.0)PLQES(0.0)PVIS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated KIAA1522 108782.6 2 28 62.1 704.36 HUMAN 1 -5.1059 8.2054 PPPSPRASPVAALKA-p O15417;S999-p PPPSPRASPVAALKA 0.815726627142776 0.92002957343663 -0.0353333333333333 -0.0123333333333333 1.6984554310457 0.510529914152161 -0.0353333333333334 -0.0123333333333333 0.676323467163095 0.889092626608348 -0.440936565641333 -0.146137291307941 O15417 TNRC18 O15417.S999.p_TNRC18 O15417_S999s _1_1_999_999 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16112.16488.2 7.35 1.03 99 1 1 1 0 647.8798 1214.7873 S999s TMT10 998 (R) AsPVAALK (A) AS(1.0)PVAALK K:TMT10,s:Phosphorylated S TNRC18 316168 1 7 75.1 647.68 HUMAN 1 -1.6985 -0.5105 PPPTPPASPPVQTII-p E7EWN3;S74-p PPPTPPASPPVQTII 0.966490451651987 0.0521694283248614 -0.00900000000000001 -0.254 0.286258491889673 17.1139954616705 -0.00900000000000001 -0.254 0.936211886538155 0.0194357119465712 -0.0838216694959932 -3.28259870434559 E7EWN3 SETD5 E7EWN3.S74.p_SETD5 E7EWN3_S74s _1_1_74_74 E7EWN3 E7EWN3 SET domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23886.23886.4 20.92 20.92 3.043 5 1 1 0 833.1811 3249.7258 S74s TMT10 55 (R) GLPYADHNYGAPPPPTPPAsPPVQTIIPR (S) GLPY(0.0)ADHNY(0.0)GAPPPPT(0.0)PPAS(0.99)PPVQT(0.0)IIPR s:Phosphorylated S SETD5 161030.5 2 2 773.1 227.48 HUMAN 1 -0.2863 -17.114 PPPVLPHSPHSHL__-p Q9NRG9;S541-p PPPVLPHSPHSHL__ 0.107015162488299 0.237676013695445 0.310666666666667 0.119666666666667 20.4246324452618 8.21907883991841 0.310666666666667 0.119666666666667 0.00906852710644514 0.150692665889139 3.97067951504093 1.67259952010277 Q9NRG9 AAAS Q9NRG9.S541.p_AAAS Q9NRG9_S511sS541s_2_2_511_541 Q9NRG9 Q9NRG9|Q9NRG9-2|F8VZ44 Aladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31826.31826.5 17.83 17.83 2.576 8 2 2 0 1017.6885 4924.4896 S511s S541s TMT10 501 (R) AQEPPAGGGGsIHDLPLFTETSPTSAPWDPLPGPPPVLPHsPHSHL (-) AQEPPAGGGGS(0.99)IHDLPLFT(0.0)ET(0.0)S(0.0)PT(0.0)S(0.0)APWDPLPGPPPVLPHS(0.99)PHS(0.0)HL s:Phosphorylated S AAAS 60428.8 4 3 3084.1 61.16 HUMAN 1 20.4246 8.2191 PPPVRRASAGPAPGP-p Q4KMP7;S687-p PPPVRRASAGPAPGP 0.924864295750906 0.562322852552469 -0.017 0.0866666666666667 0.667967149267201 3.36813150124341 -0.017 0.0866666666666667 0.857439102418866 0.460454635932514 -0.188383994942737 0.794122010000614 Q4KMP7 TBC1D10B Q4KMP7.S687.p_TBC1D10B Q4KMP7_S687s _1_1_687_687 Q4KMP7 Q4KMP7|Q4KMP7-2 TBC1 domain family member 10B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21200.21200.5 20.23 20.23 6.456 9 1 1 0 767.4046 3753.0336 S687s TMT10 685 (R) RAsAGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSK (E) RAS(0.99)AGPAPGPVVT(0.0)AEGLHPS(0.0)LPS(0.0)PT(0.0)GNS(0.0)T(0.0)PLGS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S TBC1D10B 87710.7 8 11 462.1 304.34 HUMAN 1 -0.668 3.3681 PPPYKALTDDSDENE-p Q8NI35;T1209-p PPPYKALTDDSDENE 0.218741136565907 0.407465259690114 -0.239666666666667 0.0856666666666667 12.7185158002768 5.18933905534484 -0.239666666666667 0.0856666666666667 0.0534747077781585 0.3027374123454 -2.46046653422697 1.13840743556949 Q8NI35 INADL Q8NI35.T1209.p_INADL Q8NI35_T1209tS1212s_2_2_1209_1212 Q8NI35 Q8NI35|Q8NI35-2 InaD-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19562.19773.3 13.25 13.25 6.038 3 2 2 0 930.7166 2630.1994 T1209t S1212s TMT10 1207 (K) ALtDDsDENEEEDAFTDQK (I) ALT(0.99)DDS(0.99)DENEEEDAFT(0.0)DQK K:TMT10,t:Phosphorylated T,s:Phosphorylated S PATJ 197163.3 1 26 127.1 542.92 HUMAN 1 -12.7185 5.1893 PPQAPKKSPKAPPPV-p Q9P206-3;S970-p PPQAPKKSPKAPPPV 0.44987835939256 0.659484264988504 -0.117666666666667 -0.0936666666666666 6.4094358138642 2.47326853946772 -0.117666666666667 -0.0936666666666666 0.228589574173708 0.565813292563278 -1.35718817158897 -0.611157416535655 Q9P206 KIAA1522 Q9P206.3.S970.p_KIAA1522 Q9P206-3_S970s _1_1_970_970 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9420.9420.5 11.11 6.19 4.292 3 1 1 0 693.4089 3383.0457 S970s TMT10 957 (R) SISEQRPPQAPKKsPKAPPPVAR (K) S(0.0)IS(0.0)EQRPPQAPKKS(0.99)PKAPPPVAR K:TMT10,s:Phosphorylated S KIAA1522 108782.6 5 36 62.1 704.36 HUMAN 1 -6.4094 -2.4733 PPQDLPGSPKSGPPP-p Q86Y91-4;S413-p PPQDLPGSPKSGPPP 0.286074593902172 0.00137827447980014 -0.150666666666667 -0.934333333333333 10.2553061192569 46.4155790476218 -0.150666666666667 -0.934333333333333 0.0942908146762277 2.28266455525762e-05 -2.02610285386753 -13.4308379586065 Q86Y91 KIF18B Q86Y91.4.S413.p_KIF18B Q86Y91-4_S413s _1_1_413_413 Q86Y91-4 Q86Y91-4|Q86Y91-3|A0A0C4DGP5|Q86Y91-2|A0A0C4DGP2 Isoform 4 of Kinesin-like protein KIF18B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17328.17328.4 21.15 21.15 21.153 2 1 1 0 740.6556 2879.6234 S413s TMT10 395 (K) KLQVYEGGGQPPPQDLPGsPK (S) KLQVY(0.0)EGGGQPPPQDLPGS(0.99)PK K:TMT10,s:Phosphorylated S KIF18B 96039.4 5 2 959.1 194.54 HUMAN 1 -10.2553 -46.4156 PPQEDAPSVDIANIR-p P29401-2;S303-p PPQEDAPSVDIANIR 0.265232035259173 0.0628174054712394 0.168666666666667 0.253333333333333 10.9330597557747 16.0020355113462 0.168666666666667 0.253333333333333 0.0806666505371712 0.0251070940174698 2.14438603906283 3.06641407554736 P29401 TKT P29401.2.S303.p_TKT P29401-2_S303s _1_1_303_303 P29401-2 P29401-2|A0A0B4J1R6|E9PFF2 Isoform 2 of Transketolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25991.25991.3 17.44 17.44 4.521 2 1 1 0 777.0717 2249.2339 S303s TMT10 292 (K) ILATPPQEDAPsVDIANIR (M) ILAT(0.0)PPQEDAPS(0.99)VDIANIR s:Phosphorylated S TKT 69497 7 7 1447.1 140.91 HUMAN 1 10.9331 16.002 PPQGPPGSGPPTPSR-p Q96NU1;S418-p PPQGPPGSGPPTPSR 0.63340252847051 0.875261447812302 0.186333333333333 -0.057 3.69193169621788 0.813493207347652 0.186333333333333 -0.057 0.427372752960607 0.829183553123278 0.857764123861809 -0.226396048935221 Q96NU1 SAMD11 Q96NU1.S418.p_SAMD11 Q96NU1_S418sT422t_2_2_418_422 Q96NU1 Q96NU1-5|A0A087WYW1|Q96NU1-4|Q96NU1-6 Sterile alpha motif domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29483.29483.5 11.49 9.95 1.2 4 2 2 0 754.9952 3611.0019 S418s T422t TMT10 395 (R) GALLVLNHGAAPLLALPPQGPPGsGPPtPSRDSAR (R) GALLVLNHGAAPLLALPPQGPPGS(0.99)GPPT(0.99)PS(0.0)RDS(0.0)AR s:Phosphorylated S,t:Phosphorylated T SAMD11 73391.4 1 3 4292.1 34.11 HUMAN 1 3.6919 -0.8135 PPQPARGSPGVSQRK-p Q86TI0-2;S614-p PPQPARGSPGVSQRK 0.770796508928349 0.242908974870018 0.0616666666666667 -0.165333333333333 2.16722505101699 8.09693325653121 0.0616666666666667 -0.165333333333333 0.607124131054624 0.154991069237468 0.545524808223694 -1.65144172937695 Q86TI0 TBC1D1 Q86TI0.2.S614.p_TBC1D1 Q86TI0-2_S614s _1_1_614_614 Q86TI0-2 Q86TI0|Q86TI0-2 Isoform 2 of TBC1 domain family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15214.15214.4 19.01 19.01 2.699 4 1 1 0 818.1458 3189.6061 S614s TMT10 594 (R) ANTLSHFPIECQEPPQPARGsPGVSQR (K) ANT(0.0)LS(0.0)HFPIECQEPPQPARGS(0.99)PGVS(0.0)QR C:Carbamidomethylation,s:Phosphorylated S TBC1D1 132688.3 3 9 587.1 264.9 HUMAN 1 2.1672 -8.0969 PPQPPPPSPLIPNRT-p O75128-2;S372-p PPQPPPPSPLIPNRT 0.311737507958546 0.246578258392095 0.163666666666667 -0.130666666666667 9.46992973077328 8.0123199576513 0.163666666666667 -0.130666666666667 0.112981419501732 0.158040357796689 1.88974706424816 -1.63677809884927 O75128 COBL O75128.2.S372.p_COBL O75128-2_S372s _1_1_372_372 O75128-2 O75128-2|O75128-7|O75128-3|O75128-4 Isoform 2 of Protein cordon-bleu HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11679.11679.4 20.45 20.45 3.523 2 1 1 0 902.7317 3527.9375 S372s Hydrogen 360 (R) APAPPPPQPPPPsPLIPNRTEDKEENRK (S) APAPPPPQPPPPS(0.99)PLIPNRT(0.0)EDKEENRK K:TMT10-Lys-Only,s:Phosphorylated S COBL 144838.3 6 10 254.1 405.31 HUMAN 1 9.4699 -8.0123 PPQPRPRSLASETN_-p Q9Y3L3;S695-p PPQPRPRSLASETN_ 0.229468509340402 0.0769366408459601 -0.408 -0.366333333333333 12.2830601689787 14.7786154960796 -0.408 -0.366333333333333 0.0591144948954073 0.0332765620005853 -2.38264452958222 -2.83521583667637 Q9Y3L3 SH3BP1 Q9Y3L3.S695.p_SH3BP1 Q9Y3L3_S695s _1_1_695_695 Q9Y3L3 Q9Y3L3 SH3 domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8349.8349.2 7.71 7.71 2.062 3 1 1 0 515.737 950.4992 S695s TMT10 695 (R) sLASETN (-) S(0.99)LAS(0.0)ET(0.0)N s:Phosphorylated S SH3BP1 76054.2 1 8 1166.1 170.58 HUMAN 1 -12.2831 -14.7786 PPQSVPPSPPPPSPT-p Q9UPX8-3;S897-p PPQSVPPSPPPPSPT 0.468064844876055 0.0880735545012091 0.098 0.189333333333333 6.08908645436283 13.9667440741662 0.098 0.189333333333333 0.246088520098575 0.0401167361944206 1.30041808271609 2.6852085100319 Q9UPX8 SHANK2 Q9UPX8.3.S897.p_SHANK2 Q9UPX8-3_S897s _1_1_897_897 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6|Q9UPX8-4|E7EUA2 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23741.23741.4 18.93 18.93 3.467 10 1 1 0 1039.0034 4073.0288 S897s TMT10 877 (R) SLSMPDTSEDIPPPPQSVPPsPPPPSPTTYNCPK (S) S(0.0)LS(0.0)MPDT(0.0)S(0.0)EDIPPPPQS(0.0)VPPS(0.99)PPPPS(0.0)PT(0.0)T(0.0)Y(0.0)NCPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SHANK2 202341.2 7 10 86.1 628.23 HUMAN 1 6.0891 13.9667 PPQVRSVTPPPPPRG-p O95835;T246-p PPQVRSVTPPPPPRG 0.598398269911877 0.123050675672828 0.0726666666666667 0.188666666666667 4.12013338515168 12.0025254539833 0.0726666666666667 0.188666666666667 0.387245751234583 0.0630590544856299 0.940024659373696 2.33161886609025 O95835 LATS1 O95835.T246.p_LATS1 O95835_T246t _1_1_246_246 O95835 O95835|O95835-2 Serine/threonine-protein kinase LATS1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8682.8896.2 11.09 7.36 2.841 2 1 1 0 628.8346 1176.6938 T246t TMT10 244 (R) SVtPPPPPR (G) S(0.0)VT(0.99)PPPPPR t:Phosphorylated T LATS1 127380.9 3 3 824.1 217.64 HUMAN 1 4.1201 12.0025 PPRAGPGSSPLFSLL-p Q9H0W8;S450-p PPRAGPGSSPLFSLL 0.632640472078278 0.190333336329072 -0.102666666666667 -0.224 3.70493407561956 9.47405972709428 -0.102666666666667 -0.224 0.42609515150878 0.112874028993686 -0.860289839932957 -1.88974339868931 Q9H0W8 SMG9 Q9H0W8.S450.p_SMG9 Q9H0W8_S450s _1_1_450_450 Q9H0W8 Q9H0W8|Q9H0W8-2 Protein SMG9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31869.31869.3 12.96 12.96 1.275 4 1 1 0 643.3328 1848.0217 S450s TMT10 446 (R) AGPGsSPLFSLLPGYR (G) AGPGS(0.99)S(0.0)PLFS(0.0)LLPGY(0.0)R s:Phosphorylated S SMG9 57877.9 3 5 1449.1 140.87 HUMAN 1 -3.7049 -9.4741 PPRARAASVIPGSTS-p J3KPJ3;S79-p PPRARAASVIPGSTS 0.264274172080572 0.0121185407847342 0.234333333333333 0.743 10.9618642485823 26.7673292388656 0.234333333333333 0.743 0.0801334009633458 0.00210507258876692 2.14942960232012 5.4982652396468 J3KPJ3 NotFound J3KPJ3.S79.p_NotFound J3KPJ3_S79s _1_1_79_79 J3KPJ3 J3KPJ3|Q8N5S9-2 Calcium/calmodulin-dependent protein kinase kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10571.10571.2 9.48 9.48 9.476 4 1 1 0 677.85 1274.7266 S79s TMT10 77 (R) AAsVIPGSTSR (L) AAS(0.99)VIPGS(0.0)T(0.0)S(0.0)R s:Phosphorylated S CAMKK1 59428.6 1 1 1793.3 114.32 HUMAN 1 10.9619 26.7673 PPRESRPSEEREWDR-p Q14152;S1198-p PPRESRPSEEREWDR 0.0507410919483046 0.00298196053006193 -0.466666666666667 -0.924333333333333 28.4628336718178 37.9732426536438 -0.466666666666667 -0.924333333333333 0.00142467772076039 0.000159468803104289 -5.97773252907283 -9.25608148622126 Q14152 EIF3A Q14152.S1198.p_EIF3A Q14152_S1198s _1_1_1198_1198 Q14152 Q14152|Q14152-2 Eukaryotic translation initiation factor 3 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4888.4888.4 12.49 9.14 1.101 2 1 1 0 536.2512 2062.0151 S1198s Hydrogen 1194 (R) ESRPsEEREWDREK (E) ES(0.0)RPS(0.99)EEREWDREK K:TMT10-Lys-Only,s:Phosphorylated S EIF3A 166965.8 1 10 1342.1 151.61 HUMAN 1 -28.4628 -37.9732 PPRHAQRSPEASQTD-p O95049-3;S338-p PPRHAQRSPEASQTD 0.94552025653156 0.00675137454059323 0.0156666666666667 0.490666666666667 0.478132703075039 31.1661495397197 0.0156666666666667 0.490666666666667 0.895749820258573 0.000764513301633616 0.137310645913498 6.78361793567594 O95049 TJP3 O95049.3.S338.p_TJP3 O95049-3_S338s _1_1_338_338 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4515.4515.3 17.01 17.01 3.779 5 1 1 0 796.7093 2308.1479 S338s TMT10 334 (R) HAQRsPEASQTDSPVESPR (L) HAQRS(0.99)PEAS(0.0)QT(0.0)DS(0.0)PVES(0.0)PR s:Phosphorylated S TJP3 103593.6 2 4 125.1 544.41 HUMAN 1 0.4781 31.1661 PPRIHRASDPGLPAE-p P27708;S1859-p PPRIHRASDPGLPAE 0.0359148937682839 0.000952253650599092 -0.764333333333333 -1.49666666666667 33.6403474497905 53.2456095780765 -0.764333333333333 -1.49666666666667 0.000432479229897976 4.73629824571346e-06 -7.62086101125424 -18.0524264462122 P27708 CAD P27708.S1859.p_CAD P27708_S1859s _1_1_1859_1859 P27708 P27708|F8VPD4 CAD protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7382.7382.3 19.99 19.99 99 1 1 1 0 642.6613 1846.002 S1859s Hydrogen 1855 (R) IHRAsDPGLPAEEPK (E) IHRAS(1.0)DPGLPAEEPK K:TMT10-Lys-Only,s:Phosphorylated S CAD 245318.5 25 4 628.1 257.21 HUMAN 1 -33.6403 -53.2456 PPRIRARSAPPMEGA-p Q86YD1;S53-p PPRIRARSAPPMEGA 0.196087831032382 0.0582460256163476 -0.207 -0.284333333333333 13.7847595515659 16.4521553094304 -0.207 -0.284333333333333 0.0418334849243935 0.0226352069251926 -2.65348436708401 -3.15319096029568 Q86YD1 PTOV1 Q86YD1.S53.p_PTOV1 Q86YD1_S53s _1_1_53_53 Q86YD1 Q86YD1 Prostate tumor-overexpressed gene 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7396.7396.2 11.37 1.94 99 1 1 1 0 612.7863 1144.5982 S53s TMT10 53 (R) sAPPMEGAR (V) S(1.0)APPMEGAR s:Phosphorylated S PTOV1 47324.1 1 2 3738.1 44.18 HUMAN 1 -13.7848 -16.4522 PPRKPRPSRVKAKAT-p Q5C9Z4;S147-p PPRKPRPSRVKAKAT 0.365639835317266 0.128782702969415 0.180333333333333 -0.265333333333333 8.10928202165667 11.7362085163473 0.180333333333333 -0.265333333333333 0.154550992308289 0.0670469688354647 1.6541129656546 -2.2845203501222 Q5C9Z4 NOM1 Q5C9Z4.S147.p_NOM1 Q5C9Z4_S147s _1_1_147_147 Q5C9Z4 Q5C9Z4 Nucleolar MIF4G domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3196.3196.5 9.58 7.18 2.095 3 1 1 0 442.2416 2127.2097 S147s Hydrogen 132 (R) PAPSRDPSPPRKPRPsR (V) PAPS(0.0)RDPS(0.0)PPRKPRPS(0.99)R K:TMT10-Lys-Only,s:Phosphorylated S NOM1 96826.2 4 3 2040.1 101.14 HUMAN 1 8.1093 -11.7362 PPRLMANSPSHLCEI-p Q9Y6X0;S838-p PPRLMANSPSHLCEI 0.194002306690035 0.0304837664952524 0.349333333333333 0.343333333333333 13.8928277289605 20.4878607368581 0.349333333333333 0.343333333333333 0.0408053612579374 0.00893745619705578 2.67326249967912 3.98060028401857 Q9Y6X0 SETBP1 Q9Y6X0.S838.p_SETBP1 Q9Y6X0_S838s _1_1_838_838 Q9Y6X0 Q9Y6X0 SET-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17285.17285.3 18.23 18.23 2.325 3 1 1 0 689.3383 1986.035 S838s Hydrogen 834 (R) LMANsPSHLCEIGSLK (E) LMANS(0.99)PS(0.0)HLCEIGS(0.0)LK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S SETBP1 175746.2 2 5 1489.1 137.6 HUMAN 1 13.8928 20.4879 PPRLTVVSPNRATST-p Q14CZ0;S167-p PPRLTVVSPNRATST 0.474992641256242 0.00442375630952621 -0.0963333333333333 -0.689333333333333 5.95240878358189 34.5871254442123 -0.0956539585674841 -0.689333333333333 0.253956376380231 0.000347766268621041 -1.2760809519826 -7.94345034346788 Q14CZ0 C16orf72 Q14CZ0.S167.p_C16orf72 Q14CZ0_S167s _1_1_167_167 Q14CZ0 Q14CZ0 UPF0472 protein C16orf72 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19462.19462.3 17.32 17.32 1.185 10 1 1 0 968.1336 2822.4167 S167s Hydrogen 163 (R) LTVVsPNRATSTETSSSVETDLQPFR (E) LT(0.0)VVS(0.99)PNRAT(0.0)S(0.0)T(0.0)ET(0.0)S(0.0)S(0.0)S(0.0)VET(0.0)DLQPFR s:Phosphorylated S C16orf72 31153.2 4 1 2522.1 80.11 HUMAN 1 -5.9524 -34.5871 PPRPGMHSPPPRPAP-p Q14934-3;S136-p PPRPGMHSPPPRPAP 0.709342868689964 0.414201462863505 0.0916666666666666 -0.13 2.80466294096369 5.09193556162814 0.0916666666666667 -0.13 0.524244286401566 0.309603915039802 0.680449984741364 -1.12064934933483 Q14934 NFATC4 Q14934.3.S136.p_NFATC4 Q14934-3_S136s _1_1_136_136 Q14934-3 Q14934-2|Q14934-3|Q14934-4|Q14934-5|Q14934-6|Q14934-7|Q14934-8|Q14934-9|Q14934-10|Q14934-11|Q14934-14 Isoform 3 of Nuclear factor of activated T-cells, cytoplasmic 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21012.21012.5 13.06 4.41 1.203 5 1 1 0 1012.9286 4980.6409 S136s TMT10 109 (R) LALGEPPPYGAAPIGIPRPPPPRPGMHsPPPRPAPSPGTWESQPAR (S) LALGEPPPY(0.0)GAAPIGIPRPPPPRPGMHS(0.99)PPPRPAPS(0.0)PGT(0.0)WES(0.0)QPAR s:Phosphorylated S NFATC4 102537.7 1 11 1768.1 116.39 HUMAN 1 2.8047 -5.0919 PPRPRAGSAHVWRPG-p Q8WWL2;S476-p PPRPRAGSAHVWRPG 0.1560557092084 0.170043303837229 -0.359 -0.233 16.1996998128087 10.1174714295688 -0.359 -0.233 0.0239899873365308 0.0973313746297076 -3.10662923146541 -2.00130680901737 Q8WWL2 SPIRE2 Q8WWL2.S476.p_SPIRE2 Q8WWL2_S476s _1_1_476_476 Q8WWL2 Q8WWL2|Q8WWL2-2|Q8WWL2-3|Q8WWL2-4 Protein spire homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6456.6456.4 16 16 15.996 2 1 1 0 398.203 1509.8236 S476s TMT10 474 (R) AGsAHVWRPGSR (D) AGS(0.99)AHVWRPGS(0.0)R s:Phosphorylated S SPIRE2 80924.6 4 5 1538.1 133.27 HUMAN 1 -16.1997 -10.1175 PPRRGDDSFGDKYRD-p P23588;S219-p PPRRGDDSFGDKYRD 0.0977397848374227 0.415969790995799 -0.810666666666667 -0.0973333333333333 21.3902050438795 5.06715170785449 -0.810666666666667 -0.0973333333333333 0.00726071676532664 0.311375780541905 -4.1838603304206 -1.11612173427024 P23588 EIF4B P23588.S219.p_EIF4B P23588_S219s _1_1_219_219 P23588 E7EX17|P23588|P23588-2 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5302.5302.2 10.3 6.84 99 1 1 1 0 653.2871 1225.601 S219s Hydrogen 215 (R) RGDDsFGDK (Y) RGDDS(1.0)FGDK K:TMT10-Lys-Only,s:Phosphorylated S EIF4B 69207 2 6 146.1 516.36 HUMAN 1 -21.3902 -5.0672 PPRRRTLSGSGSGSG-p E7ERS3;S709-p PPRRRTLSGSGSGSG 0.0559124300104654 0.0016237919479163 -0.461 -0.915666666666667 27.3065129467162 44.4712104403278 -0.461 -0.915666666666667 0.00185929672931287 3.57173275019324e-05 -5.65268072570363 -12.3375810154476 E7ERS3 ZC3H18 E7ERS3.S709.p_ZC3H18 E7ERS3_S709s _1_1_709_709 E7ERS3 E7ERS3|Q86VM9 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5957.5957.2 14.78 8.41 2.269 12 1 1 0 1008.939 1936.9046 S709s TMT10 707 (R) TLsGSGSGSGSSYSGSSSR (S) T(0.0)LS(0.99)GS(0.0)GS(0.0)GS(0.0)GS(0.0)S(0.0)Y(0.0)S(0.0)GS(0.0)S(0.0)S(0.0)R s:Phosphorylated S ZC3H18 109165.8 2 14 157.1 499.97 HUMAN 1 -27.3065 -44.4712 PPRRRTPSPPPRRRS-p A9Z1X7;S592-p PPRRRTPSPPPRRRS 0.168729110694674 0.158441376662528 0.353333333333333 0.414333333333333 15.4187135994966 10.5240319911235 0.353333333333333 0.414333333333333 0.0287163104656702 0.0886332758374342 2.95735639300405 2.0720303814716 A9Z1X7 NotFound A9Z1X7.S592.p_NotFound A9Z1X7_T590tS592s_2_2_590_592 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2259.2469.3 9.69 9.69 99 2 2 2 0 408.5196 1063.6119 T590t S592s Hydrogen 588 (R) RRtPsPPPR (R) RRT(1.0)PS(1.0)PPPR t:Phosphorylated T,s:Phosphorylated S SRRM1 103445.7 10 63 8.1 1346.57 HUMAN 1 15.4187 10.524 PPRSGGPSPKRSAPS-p Q96E39;S161-p PPRSGGPSPKRSAPS 0.0360407965324359 0.00749742459033072 0.876666666666667 0.528 33.2157798404361 30.3865962516014 0.876666666666667 0.528 0.000476894172977654 0.000914829951260963 7.47342041797329 6.54007140586754 Q96E39 RBMXL1 Q96E39.S161.p_RBMXL1 Q96E39_S161s _1_1_161_161 Q96E39 Q96E39 RNA binding motif protein, X-linked-like-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3608.3608.2 10.02 10.02 3.167 2 1 1 0 662.3626 1243.7523 S161s TMT10 157 (R) SGGPsPKR (S) S(0.0)GGPS(0.99)PKR K:TMT10,s:Phosphorylated S RBMXL1 42197.9 2 38 102.2 595.29 HUMAN 1 33.2158 30.3866 PPRSPPPSPPTHRAH-p Q96HA1;S188-p PPRSPPPSPPTHRAH 0.373935912464191 0.915028996213628 0.213333333333333 -0.0116666666666666 7.91306303093325 0.542248823114394 0.213333333333333 -0.0116666666666667 0.161693922604213 0.882622750603 1.62007566780248 -0.154740910335541 Q96HA1 POM121 Q96HA1.S188.p_POM121 Q96HA1_S184sS188s_2_2_184_188 Q96HA1 Q96HA1 Nuclear envelope pore membrane protein POM 121 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5009.5009.4 11.73 11.73 2.366 4 2 2 0 499.7402 1836.0078 S184s S188s TMT10 179 (R) SPPPRsPPPsPPTHR (A) S(0.0)PPPRS(0.99)PPPS(0.99)PPT(0.0)HR s:Phosphorylated S POM121 128174.4 7 49 133.1 532.02 HUMAN 1 7.9131 -0.5422 PPRSRSGSESEEAEL-p Q8IV50;S33-p PPRSRSGSESEEAEL 0.887539377298516 0.773273650393214 -0.0233333333333333 0.028 1.00903126398311 1.54484213169813 -0.0233333333333333 0.028 0.792678125315508 0.700673652254004 -0.276142293201231 0.405422601130283 Q8IV50 LYSMD2 Q8IV50.S33.p_LYSMD2 Q8IV50_S33s _1_1_33_33 Q8IV50 Q8IV50 LysM and putative peptidoglycan-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20751.20751.2 15.4 15.4 2.164 5 1 1 0 987.4669 1893.9603 S33s TMT10 31 (R) SGsESEEAELSLSLAR (T) S(0.0)GS(0.99)ES(0.0)EEAELS(0.0)LS(0.0)LAR s:Phosphorylated S LYSMD2 23519.8 3 3 2395.2 85.34 HUMAN 1 -1.009 1.5448 PPRTGGPSPAGPAAA-p P78411;S274-p PPRTGGPSPAGPAAA 0.313766308050913 0.0678710769228262 0.161333333333333 0.382333333333333 9.41580358885374 15.5453522550724 0.161333333333333 0.382333333333333 0.114398318539535 0.0278910442366451 1.88036832006059 2.97934050680293 P78411 IRX5 P78411.S274.p_IRX5 P78411_S274s _1_1_274_274 P78411 P78411|P78411-2|P78411-3 Iroquois-class homeodomain protein IRX-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5898.5898.2 13.54 13.54 2.497 2 1 1 0 709.8539 1338.7327 S274s TMT10 270 (R) TGGPsPAGPAAAR (L) T(0.0)GGPS(0.99)PAGPAAAR s:Phosphorylated S IRX5 50702.2 2 4 1529.1 133.88 HUMAN 1 9.4158 15.5454 PPSFRTGTPPGYRGT-p P54259;T669-p PPSFRTGTPPGYRGT 0.899591285811417 0.169201716093392 0.029 0.338333333333333 0.899048501626618 10.1472366344381 0.029 0.338333333333333 0.813008619196828 0.0966665761592281 0.248360517605698 2.00647760028424 P54259 ATN1 P54259.T669.p_ATN1 P54259_T669t _1_1_669_669 P54259 P54259 Atrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6137.6137.2 9.71 3.74 1.308 3 1 1 0 579.2816 1077.589 T669t TMT10 667 (R) TGtPPGYR (G) T(0.0)GT(0.99)PPGY(0.0)R t:Phosphorylated T ATN1 125583.1 2 7 869.1 209.92 HUMAN 1 0.899 10.1472 PPSGRRLSPWEDLGQ-p Q96GM1-2;S274-p PPSGRRLSPWEDLGQ 0.320451025769791 0.0188451795730032 0.144666666666667 0.332333333333333 9.25053071387264 23.7311674550032 0.144666666666667 0.332333333333333 0.118835699969223 0.00423529099157222 1.8517399755135 4.72392338984644 Q96GM1 LPPR2 Q96GM1.2.S274.p_LPPR2 Q96GM1-2_S274s _1_1_274_274 Q96GM1-2 Q96GM1-2 Isoform 2 of Phospholipid phosphatase-related protein type 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26329.26329.3 11.32 11.32 8.101 3 1 1 0 936.8072 2728.438 S274s TMT10 272 (R) RLsPWEDLGQAPTMDSPLEK (L) RLS(0.99)PWEDLGQAPT(0.0)MDS(0.0)PLEK K:TMT10,s:Phosphorylated S PLPPR2 46488 1 1 6498.1 11.32 HUMAN 1 9.2505 23.7312 PPSGRTESPATAAET-p Q9NTJ3;S41-p PPSGRTESPATAAET 0.506410629276423 0.178687053820328 0.0983333333333333 0.150333333333333 5.45471052585619 9.83850530643258 0.0983333333333333 0.150333333333333 0.284792761928714 0.103788555918695 1.18677213612213 1.95289109556306 Q9NTJ3 SMC4 Q9NTJ3.S41.p_SMC4 Q9NTJ3_S41s _1_1_41_41 Q9NTJ3 Q9NTJ3|Q9NTJ3-2 Structural maintenance of chromosomes protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18430.18638.2 15.85 11.41 1.422 5 1 1 0 1100.9946 2121.0145 S41s TMT10 39 (R) TEsPATAAETASEELDNR (S) T(0.0)ES(0.99)PAT(0.0)AAET(0.0)AS(0.0)EELDNR s:Phosphorylated S SMC4 147864 28 2 902.1 203.59 HUMAN 1 5.4547 9.8385 PPSIEPLTPPPQYDE-p Q9NW97;T234-p PPSIEPLTPPPQYDE 0.335167066678141 0.111748608816399 -0.211333333333333 -0.237333333333333 8.85381710700973 12.5625375243286 -0.211333333333333 -0.237333333333333 0.130202190052472 0.0554301747256509 -1.78305822006042 -2.4312485738337 Q9NW97 TMEM51 Q9NW97.T234.p_TMEM51 Q9NW97_T234t _1_1_234_234 Q9NW97 Q9NW97 Transmembrane protein 51 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23371.23446.4 17.19 17.19 3.353 3 1 1 0 753.8899 2932.5708 T234t TMT10 224 (K) NVPPPSIEPLtPPPQYDEVQEK (A) NVPPPS(0.0)IEPLT(0.99)PPPQY(0.0)DEVQEK K:TMT10,t:Phosphorylated T TMEM51 27815.9 2 3 3441.1 50.97 HUMAN 1 -8.8538 -12.5625 PPSMDTRSWEGTKPP-p P56945-6;S248-p PPSMDTRSWEGTKPP 0.773692966957709 0.217045740748414 -0.065 -0.316 2.13216304437703 8.72955432919101 -0.065 -0.316 0.612045480810295 0.133981417142671 -0.537875563245645 -1.76093565306658 P56945 BCAR1 P56945.6.S248.p_BCAR1 P56945-6_S248s _1_1_248_248 P56945-6 P56945-6|P56945-2|P56945-3 Isoform 6 of Breast cancer anti-estrogen resistance protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12149.12149.3 10.84 10.84 3.233 2 1 1 0 623.3483 1788.0623 S248s TMT10 248 (R) sWEGTKPPAK (V) S(0.99)WEGT(0.0)KPPAK K:TMT10,s:Phosphorylated S BCAR1 98217.4 1 3 1150.1 172.39 HUMAN 1 -2.1322 -8.7296 PPSNLPASPLMKNFD-p O60858-3;S278-p PPSNLPASPLMKNFD 0.107578256907301 0.00390986041573626 -0.312 -0.602333333333333 20.3922240748755 35.5228916685762 -0.312 -0.602333333333333 0.00913645232805433 0.00028035663141677 -3.96363608546694 -8.28871386871888 O60858 TRIM13 O60858.3.S278.p_TRIM13 O60858-3_S278s _1_1_278_278 O60858-3 O60858-3 Isoform 3 of E3 ubiquitin-protein ligase TRIM13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25042.25042.3 12.92 12.92 4.695 3 1 1 0 744.0684 2150.2295 S278s TMT10 267 (K) ETPLPPSNLPAsPLMK (N) ET(0.0)PLPPS(0.0)NLPAS(0.99)PLMK K:TMT10,s:Phosphorylated S TRIM13 48187.9 1 1 6239.1 12.92 HUMAN 1 -20.3922 -35.5229 PPSPDGASSDAEPEP-p Q9NTJ3;S27-p PPSPDGASSDAEPEP 0.414715625274144 0.119307547564754 0.128 0.258166666666667 7.05221322271387 12.1774354748372 0.128 0.258166666666667 0.197141781921264 0.0605698436365405 1.47014980160352 2.36264734320973 Q9NTJ3 SMC4 Q9NTJ3.S27.p_SMC4 Q9NTJ3_S27sS28s_2_2_27_28 Q9NTJ3 Q9NTJ3|E9PD53|Q9NTJ3-2|F8WCB7 Structural maintenance of chromosomes protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8461.8461.3 14.28 12.9 2.118 4 2 2 0 840.3271 2359.0321 S27s S28s Hydrogen 15 (R) EEGPPPPSPDGAssDAEPEPPSGR (T) EEGPPPPS(0.0)PDGAS(0.99)S(0.99)DAEPEPPS(0.0)GR s:Phosphorylated S SMC4 147864 16 7 902.1 203.59 HUMAN 2 7.0522 12.1774 PPSPEVGSPLLCRPA-p P06401;S25-p PPSPEVGSPLLCRPA 0.998180995519267 0.154086214603705 0.000333333333333329 0.196333333333333 0.0122556446754751 10.6814406522945 0.000333333333333326 0.196333333333333 0.997182011531099 0.0854783115100457 0.00369789822244782 2.09947444903335 P06401 PGR P06401.S25.p_PGR P06401_S20sS25s_2_2_20_25 P06401 P06401|P06401-5|Q8NG42|Q8NG44|Q8NG45|A0A087WXR4 Progesterone receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18387.18387.3 19.08 19.08 99 2 2 2 0 796.378 2227.1855 S20s S25s TMT10 11 (R) APHVAGGPPsPEVGsPLLCR (P) APHVAGGPPS(1.0)PEVGS(1.0)PLLCR C:Carbamidomethylation,s:Phosphorylated S PGR 100348.6 2 19 260.1 397.57 HUMAN 1 0.0123 10.6814 PPSQLLLSPPPPLPQ-p Q6N021;S407-p PPSQLLLSPPPPLPQ 0.486350322519858 0.62151667697893 -0.0966666666666667 -0.0536666666666666 5.7657325413193 2.80857883431584 -0.0966666666666667 -0.0536666666666667 0.265110388333641 0.523771805269605 -1.24271610514511 -0.681164739268964 Q6N021 TET2 Q6N021.S407.p_TET2 Q6N021_S407s _1_1_407_407 Q6N021 Q6N021|Q6N021-3|E7EPB1|Q6N021-2 Methylcytosine dioxygenase TET2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34572.34572.4 18.11 15.94 2.321 8 1 1 0 1015.5364 3979.1832 S407s TMT10 390 (K) DSFSATTTPPPPSQLLLsPPPPLPQVPQLPSEGK (S) DS(0.0)FS(0.0)AT(0.0)T(0.0)T(0.0)PPPPS(0.0)QLLLS(0.99)PPPPLPQVPQLPS(0.0)EGK K:TMT10,s:Phosphorylated S TET2 226374.6 1 8 594.1 264.06 HUMAN 1 -5.7657 -2.8086 PPSSPPPTAVSPEFA-p O75952;T159-p PPSSPPPTAVSPEFA 0.525351566694646 0.144390037458053 0.114 0.199666666666667 5.17106428929694 11.0712150752872 0.114 0.199666666666667 0.304013991262585 0.0781409150237012 1.13531611575353 2.16760578436564 O75952 CABYR O75952.T159.p_CABYR O75952_T159t _1_1_159_159 O75952 O75952|O75952-2 Calcium-binding tyrosine phosphorylation-regulated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36885.36885.3 20.83 20.83 1.121 8 1 1 0 1326.0121 3896.0556 T159t TMT10 149 (K) TTTPPSSPPPtAVSPEFAYVPADPAQLAAQMLGK (V) T(0.0)T(0.0)T(0.0)PPS(0.0)S(0.0)PPPT(0.99)AVS(0.0)PEFAY(0.0)VPADPAQLAAQMLGK K:TMT10,t:Phosphorylated T CABYR 52944.2 1 3 3236.1 56.25 HUMAN 1 5.1711 11.0712 PPSSTDRSPYEKVSA-p P15941-4;S1215-p PPSSTDRSPYEKVSA 0.297317297427867 0.00888933969691268 -0.148666666666667 -0.697 9.92064377096188 29.0565619094324 -0.148666666666667 -0.697 0.101844040963141 0.00124263565033625 -1.96792680325023 -6.14080463973769 P15941 MUC1 P15941.4.S1215.p_MUC1 P15941-4_S1215s _1_1_1215_1215 P15941-4 P15941-8|A0A0A0MSH4|P15941-11|P15941-17|P15941-7|A0A0A0MRB3|A0A087WWM1|P15941-3|P15941-4|A0A087X2A4|A0A0C4DGW3|A0A087X0L2|P15941-6|B1AVQ7|P15941-15|A6ZIE3|P15941-10|A6ZIE4|P15941-9|P15941-16|P15941-12 Isoform 4 of Mucin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10570.10960.3 15.47 11.25 3.777 6 1 1 0 722.0285 2084.1064 S1215s TMT10 1206 (R) YVPPSSTDRsPYEK (V) Y(0.0)VPPS(0.0)S(0.0)T(0.0)DRS(0.99)PY(0.0)EK K:TMT10,s:Phosphorylated S MUC1 121190 3 2 3420.1 51.62 HUMAN 1 -9.9206 -29.0566 PPSSYSRSLPGSALE-p O75145;S508-p PPSSYSRSLPGSALE 0.148266672319898 0.149208662656429 0.259666666666667 0.184666666666667 16.7450562318472 10.874548240048 0.259666666666667 0.184666666666667 0.0211589628873191 0.081760808239927 3.21258869117085 2.1331963316484 O75145 PPFIA3 O75145.S508.p_PPFIA3 O75145_S508s _1_1_508_508 O75145 O75145|O75145-2|R4GN36 Liprin-alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20649.20649.2 12.04 5.66 2.138 2 1 1 0 676.3644 1271.7521 S508s TMT10 508 (R) sLPGSALELR (Y) S(0.99)LPGS(0.0)ALELR s:Phosphorylated S PPFIA3 134064.6 3 7 248.2 410.18 HUMAN 1 16.7451 10.8745 PPSTAAASPAGLDLS-p O15156;S480-p PPSTAAASPAGLDLS 0.417812171186908 0.361684986883353 0.124 0.0906666666666667 6.99488799478046 5.85918338955382 0.124 0.0906666666666667 0.199761228650865 0.259466719542854 1.46011835330334 1.25914439180955 O15156 ZBTB7B O15156.S480.p_ZBTB7B O15156_S480sS487s_2_2_480_487 O15156 O15156-2 Zinc finger and BTB domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16904.16904.5 24.03 21.12 2.219 6 2 2 0 818.7983 3930.0299 S480s S487s TMT10 463 (R) RKDDAPPHYPPPSTAAAsPAGLDLsNGHLDTFR (L) RKDDAPPHY(0.0)PPPS(0.0)T(0.0)AAAS(0.99)PAGLDLS(0.99)NGHLDT(0.0)FR K:TMT10,s:Phosphorylated S ZBTB7B 58938.8 5 10 701.1 240.09 HUMAN 1 6.9949 5.8592 PPSVKTPTPEPAEVE-p F8W6G1;T441-p PPSVKTPTPEPAEVE 0.508385873914341 0.72197682317235 -0.089 0.0736666666666667 5.42272700604661 1.94792199079259 -0.089 0.0736666666666667 0.28689785377939 0.63856895513263 -1.18099193226257 0.497180677253813 F8W6G1 NotFound F8W6G1.T441.p_NotFound F8W6G1_T441t _1_1_441_441 F8W6G1 F8W6G1|Q9UHY1 Nuclear receptor-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9658.9658.3 14.65 14.65 1.141 3 1 1 0 545.933 1555.8165 T441t TMT10 439 (K) TPtPEPAEVETR (K) T(0.0)PT(0.99)PEPAEVET(0.0)R t:Phosphorylated T NRBP1 61399.3 2 4 1947.1 105.8 HUMAN 1 -5.4227 1.9479 PPSVQRHSPNPLLVA-p Q8TEK3;S471-p PPSVQRHSPNPLLVA 0.989051104038883 0.365866820257343 0.00299999999999999 -0.116 0.0978889332032762 5.7895935143954 0.003 -0.116 0.977712362737034 0.263657814947403 0.0292517580624636 -1.24670232723666 Q8TEK3 DOT1L Q8TEK3.S471.p_DOT1L Q8TEK3_S471s _1_1_471_471 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21468.21468.3 21.02 18.81 11.555 2 1 1 0 697.0533 2009.1745 S471s Hydrogen 470 (R) HsPNPLLVAPTPPALQK (L) HS(0.99)PNPLLVAPT(0.0)PPALQK K:TMT10-Lys-Only,s:Phosphorylated S DOT1L 185648.6 2 7 132.1 534.85 HUMAN 1 0.0979 -5.7896 PPSYKPPTPKAKLEA-p Q92692;T410-p PPSYKPPTPKAKLEA 0.255601363161241 0.0875814623636463 0.17 -0.235 11.2620965173715 14.0007285666529 0.17 -0.235 0.0747808415606977 0.039804039022513 2.2020916305033 -2.69143761939785 Q92692 PVRL2 Q92692.T410.p_PVRL2 Q92692_T410t _1_1_410_410 Q92692 Q92692 Nectin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16486.16486.4 22.29 17.75 2.463 4 1 1 0 970.7589 3800.0412 T410t TMT10 387 (R) KEQTLQGAEEDEDLEGPPSYKPPtPK (A) KEQT(0.0)LQGAEEDEDLEGPPS(0.0)Y(0.0)KPPT(0.99)PK K:TMT10,t:Phosphorylated T NECTIN2 58197.4 3 2 1687.1 120.88 HUMAN 1 11.2621 -14.0007 PPSYLGASVDKLHHP-p A7KAX9;S1220-p PPSYLGASVDKLHHP 0.195954837597201 0.0805568106252645 -0.235 0.274666666666667 13.7987539485402 14.5105177628746 -0.235 0.274666666666667 0.0416989006272375 0.0353955140281137 -2.65604319360149 2.78539721982979 A7KAX9 ARHGAP32 A7KAX9.S1220.p_ARHGAP32 A7KAX9_S1220s _1_1_1220_1220 A7KAX9 A7KAX9|A7KAX9-2 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22763.22763.3 14.68 14.69 1.186 5 1 1 0 790.3884 2289.1803 S1220s TMT10 1207 (R) FYSGDQPPSYLGAsVDK (L) FY(0.0)S(0.0)GDQPPS(0.0)Y(0.0)LGAS(0.99)VDK K:TMT10,s:Phosphorylated S ARHGAP32 232236.5 3 21 159.1 497.4 HUMAN 1 -13.7988 14.5105 PPTCTDHSPSRKLPE-p Q9Y6X0;S513-p PPTCTDHSPSRKLPE 0.148303739525478 0.0529773882018352 0.283333333333333 -0.229333333333333 16.728046733382 17.016546346396 0.283333333333333 -0.229333333333333 0.0212419961926582 0.0198767495400145 3.2092614874814 -3.26340475226538 Q9Y6X0 SETBP1 Q9Y6X0.S513.p_SETBP1 Q9Y6X0_S513s _1_1_513_513 Q9Y6X0 Q9Y6X0 SET-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12857.12857.4 13.23 13.23 1.108 5 1 1 0 645.0656 2497.2766 S513s TMT10 499 (R) KPPMVMTPPTCTDHsPSR (K) KPPMVMT(0.0)PPT(0.0)CT(0.0)DHS(0.99)PS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SETBP1 175746.2 2 1 1489.1 137.6 HUMAN 1 16.728 -17.0165 PPTEGAGSPAKASQA-p Q8TES7-6;S417-p PPTEGAGSPAKASQA 0.633204865850603 0.00112006726578317 -0.0663333333333333 -1.26166666666667 3.69661102142755 49.4801602700046 -0.0663333333333333 -1.26166666666667 0.426912526268444 1.12715585937526e-05 -0.858673297121179 -15.3429985613558 Q8TES7 FBF1 Q8TES7.6.S417.p_FBF1 Q8TES7-6_S417s _1_1_417_417 Q8TES7-6 Q8TES7-6|K7ENL6|Q8TES7-5|Q8TES7-2|Q8TES7-3|Q8TES7-4 Isoform 6 of Fas-binding factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7372.7372.3 12.91 12.91 5.206 2 1 1 0 660.0369 1898.1314 S417s TMT10 408 (R) AKPPTEGAGsPAK (A) AKPPT(0.0)EGAGS(0.99)PAK K:TMT10,s:Phosphorylated S FBF1 127438.2 5 6 1602.1 128.37 HUMAN 1 -3.6966 -49.4802 PPTIRPNSPYDLCSR-p Q96RU2;S1053-p PPTIRPNSPYDLCSR 0.325611631944441 0.0584002609245864 0.137 0.234 9.12480239600217 16.4360220620887 0.137 0.234 0.122326277624245 0.0227194489626299 1.82996904251021 3.15006381208486 Q96RU2 USP28 Q96RU2.S1053.p_USP28 Q96RU2_S1053s _1_1_1053_1053 Q96RU2 Q96RU2|Q96RU2-2|B4E3L3|G3V1N5 Ubiquitin carboxyl-terminal hydrolase 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30231.30231.4 17.52 17.52 1.106 5 1 1 0 933.7498 3652.0184 S1053s TMT10 1033 (R) LLDPSAEIIVLKEPPTIRPNsPYDLCSR (F) LLDPS(0.0)AEIIVLKEPPT(0.0)IRPNS(0.99)PY(0.0)DLCS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S USP28 123630 11 5 1212.1 166.18 HUMAN 1 9.1248 16.436 PPTKRSLSEEKEDHS-p Q6P0Q8;S876-p PPTKRSLSEEKEDHS 0.882809426951781 0.0684158909616269 -0.028 -0.331 1.06784669388726 15.4968038673634 -0.028 -0.331 0.782015445076405 0.0282045784621031 -0.290811527473936 -2.97013948681833 Q6P0Q8 MAST2 Q6P0Q8.S876.p_MAST2 Q6P0Q8_S876s _1_1_876_876 Q6P0Q8 Q6P0Q8|Q6P0Q8-2|E7ERL6 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15543.15543.3 16.56 16.56 2.225 3 1 1 0 861.4479 2502.3655 S876s TMT10 874 (R) SLsEEKEDHSDGLAGLK (G) S(0.0)LS(0.99)EEKEDHS(0.0)DGLAGLK K:TMT10,s:Phosphorylated S MAST2 197687.5 8 49 121.1 549.41 HUMAN 1 -1.0678 -15.4968 PPTPEAQSEEERSDE-p Q9BTK6;S143-p PPTPEAQSEEERSDE 0.476702687437192 0.76915098289621 -0.338 0.201 5.92390486513221 1.57524492679524 -0.338 0.201 0.255628642351993 0.695785713729864 -1.27099599385558 0.412493368484905 Q9BTK6 PAGR1 Q9BTK6.S143.p_PAGR1 Q9BTK6_T138tS143sS148s_3_3_138_148 Q9BTK6 Q9BTK6 PAXIP1-associated glutamate-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8712.8712.4 7.9 3.87 99 3 3 3 0 778.0873 2869.4216 T138t S143s S148s TMT10 135 (R) RPPtPEAQsEEERsDEEPEAK (E) RPPT(1.0)PEAQS(1.0)EEERS(1.0)DEEPEAK K:TMT10,t:Phosphorylated T,s:Phosphorylated S PAGR1 27829.6 2 3 2728.1 72.58 HUMAN 1 -5.9239 1.5752 PPTQKPPSPPMSGKG-p Q9NYB9-2;S177-p PPTQKPPSPPMSGKG 0.738786253352318 0.248866197214085 0.0493333333333333 0.119666666666667 2.49412340277857 7.95756981182134 0.0493333333333333 0.11799435955073 0.563102764821601 0.160045334618555 0.615647280329408 1.6272863152791 Q9NYB9 ABI2 Q9NYB9.2.S177.p_ABI2 Q9NYB9-2_S177s _1_1_177_177 Q9NYB9-2 Q9NYB9|F8WAL6|Q9NYB9-4|A0A0C4DG21|E7EW77|Q9NYB9-2|E9PEZ7|Q9NYB9-3|B7Z836 Isoform 2 of Abl interactor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12521.12521.3 15.83 15.83 4.041 5 1 1 0 806.7739 2338.3408 S177s TMT10 168 (R) TTPPTQKPPsPPMSGK (G) T(0.0)T(0.0)PPT(0.0)QKPPS(0.99)PPMS(0.0)GK K:TMT10,s:Phosphorylated S ABI2 52501.9 14 3 1041.1 185.01 HUMAN 1 2.4941 7.9576 PPTQKPPSPPMSGRG-p Q8IZP0-9;S183-p PPTQKPPSPPMSGRG 0.556601093873565 0.0699911058958282 0.0826666666666667 0.208666666666667 4.69882809120256 15.3560599155802 0.0826666666666667 0.208666666666667 0.33893560285227 0.0291335902938147 1.04856602463164 2.94352414352631 Q8IZP0 ABI1 Q8IZP0.9.S183.p_ABI1 Q8IZP0-9_S183s _1_1_183_183 Q8IZP0-9 Q8IZP0|Q8IZP0-12|Q8IZP0-9|Q8IZP0-6|Q8IZP0-5|A0A0A0MRT6|Q8IZP0-3|Q8IZP0-4|Q8IZP0-2|Q8IZP0-7|Q8IZP0-8|B6VEX4|Q8IZP0-10|Q8IZP0-11 Isoform 9 of Abl interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9755.9755.2 14.11 8.76 2 4 1 1 0 1115.5751 2150.1792 S183s TMT10 174 (R) TNPPTQKPPsPPMSGR (G) T(0.0)NPPT(0.0)QKPPS(0.99)PPMS(0.0)GR K:TMT10,s:Phosphorylated S ABI1 52580.9 38 1 1517.1 134.48 HUMAN 1 4.6988 15.3561 PPTQPPISPPYQEAC-p Q9UET6;S271-p PPTQPPISPPYQEAC 0.0478425512795069 0.00515478121615231 -0.542333333333333 -0.562666666666667 29.2792089092369 33.2866441543145 -0.542333333333333 -0.562666666666667 0.0011805356569885 0.00046917577987963 -6.21578384716217 -7.48425395921297 Q9UET6 FTSJ1 Q9UET6.S271.p_FTSJ1 Q9UET6_S271s _1_1_271_271 Q9UET6 Q9UET6|Q9UET6-2|B7Z4K4 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23084.23287.3 18.79 18.79 4.166 6 1 1 0 942.8123 2746.4526 S271s TMT10 262 (K) YTPPTQPPIsPPYQEACTLK (R) Y(0.0)T(0.0)PPT(0.0)QPPIS(0.99)PPY(0.0)QEACT(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FTSJ1 36706.1 2 1 3702.1 44.92 HUMAN 1 -29.2792 -33.2866 PPTRNIPSPGQLDPD-p Q9P2D1;S2559-p PPTRNIPSPGQLDPD 0.207427487300816 0.108486672665063 -0.213666666666667 -0.189666666666667 13.1815610182945 12.7447216400087 -0.213666666666667 -0.189666666666667 0.0480666547695796 0.0531530066705143 -2.54383530447653 -2.46384708065495 Q9P2D1 CHD7 Q9P2D1.S2559.p_CHD7 Q9P2D1_S2559s _1_1_2559_2559 Q9P2D1 Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27093.27093.4 21.87 21.87 8.235 3 1 1 0 732.3772 2846.521 S2559s TMT10 2556 (R) NIPsPGQLDPDTRIPVINLEDGTR (L) NIPS(0.99)PGQLDPDT(0.0)RIPVINLEDGT(0.0)R s:Phosphorylated S CHD7 337747 7 12 256.1 399.25 HUMAN 1 -13.1816 -12.7447 PPTRRRRSPSPAPPP-p A9Z1X7;S569-p PPTRRRRSPSPAPPP 0.744227311761118 0.0679298566354982 0.045 0.206666666666667 2.43511849801518 15.5383014983976 0.045 0.206666666666667 0.570805501430631 0.0279363620322108 0.603142731989905 2.97800357812051 A9Z1X7 NotFound A9Z1X7.S569.p_NotFound A9Z1X7_S569s _1_1_569_569 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3235.3235.3 16.23 16.23 2.425 2 1 1 0 433.2225 1217.6862 S569s Hydrogen 567 (R) RRsPSPAPPPR (R) RRS(0.99)PS(0.0)PAPPPR s:Phosphorylated S SRRM1 103445.7 27 22 8.1 1346.57 HUMAN 1 2.4351 15.5383 PPTSNAPSDPATTTA-p Q9H8Y8-3;S407-p PPTSNAPSDPATTTA 0.766667060694937 0.258170455972091 -0.0933333333333333 -0.152 2.21165123486908 7.74786827735273 -0.0933333333333334 -0.152 0.600945208135268 0.167962825677793 -0.5551797894329 -1.59090205318131 Q9H8Y8 GORASP2 Q9H8Y8.3.S407.p_GORASP2 Q9H8Y8-3_S407s_1_1_407_407 Q9H8Y8-3 Q9H8Y8-3|Q9H8Y8-2 Isoform 3 of Golgi reassembly-stacking protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.37279.37279.5 19.39 16.48 1.582 15 1 1 0 1160.2039 5716.0301 N404n S407s TMT10 363 (R) NLPGIAPLPLPSEFLPSFPLVPESSSAASSGELLSSLPPTSnAPsDPATTTAK (A) N(0.0)LPGIAPLPLPS(0.0)EFLPS(0.0)FPLVPES(0.0)S(0.0)S(0.0)AAS(0.0)S(0.0)GELLS(0.0)S(0.0)LPPT(0.0)S(0.0)N(0.99)APS(0.99)DPAT(0.0)T(0.0)T(0.0)AK K:TMT10,n:Deamidated,s:Phosphorylated S GORASP2 48958.5 1 5 992.1 191.2 HUMAN 1 -2.2117 -7.7479 PPVARKPSVGVPPPA-p Q9P206-3;S982-p PPVARKPSVGVPPPA 0.523422472937247 0.152156774536287 0.0876666666666667 0.225666666666667 5.20107037938466 10.7521362732744 0.0876666666666667 0.225666666666667 0.301920750285264 0.0840981365273804 1.14078089529071 2.11181272756455 Q9P206 KIAA1522 Q9P206.3.S982.p_KIAA1522 Q9P206-3_S982s _1_1_982_982 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14737.14737.3 9.74 9.74 9.742 4 1 1 0 725.3964 2094.2112 S982s TMT10 980 (R) KPsVGVPPPASPSYPR (A) KPS(0.99)VGVPPPAS(0.0)PS(0.0)Y(0.0)PR K:TMT10,s:Phosphorylated S KIAA1522 108782.6 1 37 62.1 704.36 HUMAN 1 5.2011 10.7521 PPVGTGRSPRKRTTS-p Q9NWZ5;S56-p PPVGTGRSPRKRTTS 0.361753568197081 0.00829953850919329 -0.255666666666667 -0.612333333333333 8.20570332064837 29.5834508269589 -0.255666666666667 -0.612333333333333 0.151157488669056 0.00110066439357719 -1.6708270103117 -6.29658343292663 Q9NWZ5 UCKL1 Q9NWZ5.S56.p_UCKL1 Q9NWZ5_S56s _1_1_56_56 Q9NWZ5 Q9NWZ5 Uridine-cytidine kinase-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18435.18435.4 12.63 8.62 1.39 4 1 1 0 608.5719 2351.2993 S56s TMT10 39 (R) SNAESLDRLLPPVGTGRsPR (K) S(0.0)NAES(0.0)LDRLLPPVGT(0.0)GRS(0.99)PR s:Phosphorylated S UCKL1 61539.3 9 2 2046.1 100.92 HUMAN 1 -8.2057 -29.5835 PPVKPPPSPVNIRTG-p Q8TF74;S235-p PPVKPPPSPVNIRTG 0.997068365879862 0.0435158905823079 0.000666666666666663 -0.242666666666667 0.022080487990379 18.2400503669215 0.000666666666666661 -0.242666666666667 0.994928682522398 0.0149966744313992 0.00665486372837994 -3.50809039015016 Q8TF74 WIPF2 Q8TF74.S235.p_WIPF2 Q8TF74_S235s _1_1_235_235 Q8TF74 Q8TF74|Q8TF74-2 WAS/WASL-interacting protein family member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17499.17499.4 15.51 15.51 99 1 1 1 0 621.8508 2404.4117 S235s TMT10 222 (R) EGPPAPPPVKPPPsPVNIR (T) EGPPAPPPVKPPPS(1.0)PVNIR K:TMT10,s:Phosphorylated S WIPF2 46344.7 3 5 952.1 196.18 HUMAN 1 0.0221 -18.2401 PPVLRTASQEGCQEL-p O43933;S1181-p PPVLRTASQEGCQEL 0.995103621521408 0.0439548734434433 -0.000999999999999992 0.303666666666667 0.042149050073874 18.1755481144549 -0.000999999999999989 0.303666666666667 0.990341765809234 0.0152210701864855 -0.0126743611305885 3.49498384604413 O43933 PEX1 O43933.S1181.p_PEX1 O43933_S1181s _1_1_1181_1181 O43933 O43933|A0A0C4DG33|O43933-2 Peroxisome biogenesis factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7735.7735.2 17.3 11.15 3.229 3 1 1 0 1037.4581 1993.9446 S1181s TMT10 1179 (R) TAsQEGCQELTQEQR (D) T(0.0)AS(0.99)QEGCQELT(0.0)QEQR C:Carbamidomethylation,s:Phosphorylated S PEX1 143891.4 7 3 1753.1 117.58 HUMAN 1 -0.0421 18.1755 PPVNLEDSLDEDLIR-p Q9NPG3;S660-p PPVNLEDSLDEDLIR 0.252209396367937 0.0207353276371136 0.253666666666667 0.388666666666667 11.4118779096072 23.0269847299054 0.253666666666667 0.388666666666667 0.0722457342125865 0.00498082779647176 2.22843080592601 4.55569940142581 Q9NPG3 UBN1 Q9NPG3.S660.p_UBN1 Q9NPG3_S660s _1_1_660_660 Q9NPG3 Q9NPG3|Q9NPG3-2 Ubinuclein-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29911.30113.4 23.71 21.71 1.943 6 1 1 0 1139.3313 4474.3353 S660s TMT10 640 (R) ELPSQASGGLANPPPVNLEDsLDEDLIRNPASSVEAVSK (E) ELPS(0.0)QAS(0.0)GGLANPPPVNLEDS(0.99)LDEDLIRNPAS(0.0)S(0.0)VEAVS(0.0)K K:TMT10,s:Phosphorylated S UBN1 122088.8 5 3 1087.1 179.43 HUMAN 1 11.4119 23.027 PPVNRALTPAATLSA-p Q96FJ0-2;T250-p PPVNRALTPAATLSA 0.778227318172308 0.557959288835422 0.0393333333333333 0.0636666666666667 2.09207793975887 3.41655591690509 0.0393333333333333 0.0636666666666667 0.617720772694256 0.455349022184137 0.529098160991186 0.803698703286264 Q96FJ0 STAMBPL1 Q96FJ0.2.T250.p_STAMBPL1 Q96FJ0-2_T250t _1_1_250_250 Q96FJ0-2 Q96FJ0-2|B3KR00 Isoform 2 of AMSH-like protease HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37963.37963.3 23.68 23.68 5.996 3 1 1 0 778.0982 2252.3175 T250t TMT10 248 (R) ALtPAATLSAVQNLVVEGLR (C) ALT(0.99)PAAT(0.0)LS(0.0)AVQNLVVEGLR t:Phosphorylated T STAMBPL1 52825.4 2 2 3940.1 40.43 HUMAN 1 2.0921 3.4166 PPVNRSHSVPENMVE-p A1L390;S1081-p PPVNRSHSVPENMVE 0.381381938406044 0.735435468052079 0.235333333333333 -0.075 7.73867519076625 1.84005839212313 0.235333333333333 -0.075 0.168318743673411 0.654627372357675 1.58979235072794 -0.473029739185792 A1L390 PLEKHG3 A1L390.S1081.p_PLEKHG3 A1L390_S1081s _1_1_1081_1081 A1L390 A1L390|A1L390-3|A1L390-2 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14313.14313.3 13.68 13.68 1.109 3 1 1 0 682.3295 1965.0061 S1081s TMT10 1079 (R) SHsVPENMVEPPLSGR (V) S(0.0)HS(0.99)VPENMVEPPLS(0.0)GR s:Phosphorylated S PLEKHG3 135322.7 1 23 284.1 386.18 HUMAN 1 7.7387 -1.8401 PPVPRQASPQNLGTP-p P27708;S1900-p PPVPRQASPQNLGTP 0.897030328329001 0.80998031021081 0.0323333333333333 -0.0373333333333333 0.924847702452763 1.28281836183801 0.0323333333333333 -0.0373333333333333 0.808193270180573 0.744248835538078 0.254919553604586 -0.343354308074083 P27708 CAD P27708.S1900.p_CAD P27708_S1900s _1_1_1900_1900 P27708 P27708|F8VPD4 CAD protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29612.29612.5 21.08 21.08 5.003 7 1 1 0 902.8939 4430.4713 S1900s TMT10 1898 (R) QAsPQNLGTPGLLHPQTSPLLHSLVGQHILSVQQFTK (D) QAS(0.99)PQNLGT(0.0)PGLLHPQT(0.0)S(0.0)PLLHS(0.0)LVGQHILS(0.0)VQQFT(0.0)K K:TMT10,s:Phosphorylated S CAD 245318.5 3 6 628.1 257.21 HUMAN 1 0.9248 -1.2828 PPVQKQASLPVSGSV-p Q9Y3S1;S1862-p PPVQKQASLPVSGSV 0.98701560524362 0.0375604802980455 0.00266666666666666 -0.31 0.115266838513698 19.148017330614 0.00266666666666666 -0.31 0.973807950939742 0.0121674134853713 0.0343783781957827 -3.6951730587481 Q9Y3S1 WNK2 Q9Y3S1.S1862.p_WNK2 Q9Y3S1_S1862s _1_1_1862_1862 Q9Y3S1 Q9Y3S1|Q9Y3S1-4 Serine/threonine-protein kinase WNK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24130.24130.3 15.46 15.46 3.511 3 1 1 0 700.7106 2020.1479 S1862s TMT10 1860 (K) QAsLPVSGSVAGDFVK (K) QAS(0.99)LPVS(0.0)GS(0.0)VAGDFVK K:TMT10,s:Phosphorylated S WNK2 244440.3 2 4 3090.1 60.95 HUMAN 1 0.1153 -19.148 PPVQRLMTPKPVSIA-p P49790-3;T369-p PPVQRLMTPKPVSIA 0.235607918093946 0.202242524685277 0.196333333333333 0.134333333333333 12.0289532916087 9.13195806846587 0.196333333333333 0.134333333333333 0.0626764905282371 0.122124892137974 2.33747113001041 1.83053889190397 P49790 NUP153 P49790.3.T369.p_NUP153 P49790-3_T369t _1_1_369_369 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17993.17993.3 12.9 12.9 2.279 3 1 1 0 656.0378 1886.1298 T369t TMT10 367 (R) LMtPKPVSIATNR (S) LMT(0.99)PKPVS(0.0)IAT(0.0)NR K:TMT10,t:Phosphorylated T NUP153 158989.2 3 17 64.1 696.53 HUMAN 1 12.029 9.132 PPVRQEPSPKPNNKT-p Q8N684-3;S103-p PPVRQEPSPKPNNKT 0.971444785466597 0.372368355903318 -0.00999999999999999 -0.133666666666667 0.245769256767302 5.69263603648541 -0.01 -0.133666666666667 0.944980995100995 0.269610248283571 -0.0722728091379825 -1.22933104944382 Q8N684 CPSF7 Q8N684.3.S103.p_CPSF7 Q8N684-3_S103s _1_1_103_103 Q8N684-3 Q8N684-3|Q8N684-2|F5GXA3|F5H6P5|F5H6A8|F5H2K8|F5H1W4|F5H5B7 Isoform 3 of Cleavage and polyadenylation specificity factor subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19899.19899.4 16.47 13.03 3.937 6 1 1 0 811.1953 3161.7926 S103s TMT10 100 (R) QEPsPKPNNKTPAILYTYSGLR (N) QEPS(0.99)PKPNNKT(0.0)PAILY(0.0)T(0.0)Y(0.0)S(0.0)GLR K:TMT10,s:Phosphorylated S CPSF7 56545.1 14 2 1653.1 123.34 HUMAN 1 -0.2458 -5.6926 PPVSPNDSGAKIASN-p Q9UK61;S1107-p PPVSPNDSGAKIASN 0.806637424704846 0.072354838148445 0.0453333333333333 0.211666666666667 1.79645321520945 15.1557349774241 0.0453333333333334 0.211666666666667 0.661233241789508 0.0305088966872786 0.463237938330233 2.90579040560584 Q9UK61 FAM208A Q9UK61.S1107.p_FAM208A Q9UK61_S1103sS1107s_2_2_1103_1107 Q9UK61 Q9UK61|Q9UK61-4|Q9UK61-3|Q9UK61-2|A0A087X0F1 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14921.15520.3 11.76 8.94 99 2 2 2 0 676.6595 1868.0278 S1103s S1107s TMT10 1096 (K) GGNLPPVsPNDsGAK (I) GGNLPPVS(1.0)PNDS(1.0)GAK K:TMT10,s:Phosphorylated S FAM208A 190568.5 3 21 246.1 411.17 HUMAN 1 1.7965 15.1557 PPVVPNDYVPSPTRN-p F8WAL6;Y213-p PPVVPNDYVPSPTRN 0.435053977919998 0.250487195948447 0.234333333333333 -0.135666666666667 6.65448853478029 7.92123103177816 0.234333333333333 -0.135666666666667 0.216048445836024 0.16139010227949 1.40038711453782 -1.62098479666365 F8WAL6 ABI2 F8WAL6.Y213.p_ABI2 F8WAL6_Y213y _1_1_213_213 F8WAL6 Q9NYB9|F8WAL6|Q9NYB9-4|A0A0C4DG21|E7EW77|Q9NYB9-2|Q9NYB9-3|B7Z836 Abl interactor 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.23539.23539.3 18.14 18.14 1.727 4 1 1 0 848.1128 2462.3605 Y213y TMT10 200 (R) TLEPVRPPVVPNDyVPSPTR (N) T(0.0)LEPVRPPVVPNDY(0.99)VPS(0.0)PT(0.0)R y:Phosphorylated Y ABI2 55738.3 2 1 192.1 18.14 HUMAN 1 6.6545 -7.9212 PPVYHGNSPKHFPTA-p X6RAB3;S665-p PPVYHGNSPKHFPTA 0.898522472312718 0.451263166114595 0.0186666666666667 -0.0876666666666667 0.909107041185857 4.60686228129252 0.0186797315660096 -0.0876666666666667 0.811127817807524 0.346189404642576 0.250920869109026 -1.03129952517907 X6RAB3 NotFound X6RAB3.S665.p_NotFound X6RAB3_S665s _1_1_665_665 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11530.11530.4 18.83 16.54 1.882 5 1 1 0 665.0884 2577.3614 S665s TMT10 648 (R) GLAHPPSYSNPPVYHGNsPK (H) GLAHPPS(0.0)Y(0.0)S(0.0)NPPVY(0.0)HGNS(0.99)PK K:TMT10,s:Phosphorylated S USP6NL 96835.5 4 11 364.1 342.41 HUMAN 1 0.9091 -4.6069 PPYASPRSPPVQPHT-p Q96ST3;S277-p PPYASPRSPPVQPHT 0.545295039840511 0.82022628682992 0.0803333333333333 0.0223333333333334 4.86127755495644 1.20488166797155 0.0803333333333333 0.0223333333333334 0.326491774644853 0.757725378295 1.07857410472255 0.324476740731478 Q96ST3 SIN3A Q96ST3.S277.p_SIN3A Q96ST3_S277s_1_1_277_277 Q96ST3 Q96ST3 Paired amphipathic helix protein Sin3a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25036.25036.5 21.69 21.69 1.154 7 1 1 0 910.4805 4467.3825 S277s N298n TMT10 277 (R) sPPVQPHTPVTISLGTAPSLQnNQPVEFNHAINYVNK (I) S(0.99)PPVQPHT(0.0)PVT(0.0)IS(0.0)LGT(0.0)APS(0.0)LQN(0.99)N(0.0)QPVEFN(0.0)HAIN(0.0)Y(0.0)VN(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated SIN3A 145971.2 9 6 501.1 291.36 HUMAN 1 4.8613 1.2049 PPYNRAVSLDSPVSV-p Q9Y6Q9;S857-p PPYNRAVSLDSPVSV 0.36641758160487 0.278131322726147 0.127 0.128333333333333 8.09454889962321 7.32284390975714 0.127 0.128333333333333 0.15507618555982 0.185231826442488 1.65155844457452 1.51697668410564 Q9Y6Q9 NCOA3 Q9Y6Q9.S857.p_NCOA3 Q9Y6Q9_S857s _1_1_857_857 Q9Y6Q9 Q9Y6Q9|Q9Y6Q9-5|Q9Y6Q9-3|Q9Y6Q9-2 Nuclear receptor coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22183.22194.2 18.66 14.79 1.156 5 1 1 0 1082.5863 2084.2003 S857s TMT10 855 (R) AVsLDSPVSVGSSPPVK (N) AVS(0.99)LDS(0.0)PVS(0.0)VGS(0.0)S(0.0)PPVK K:TMT10,s:Phosphorylated S NCOA3 156203.6 5 11 503.1 290.6 HUMAN 1 8.0945 7.3228 PQAAKSPSPVQGKKS-p Q96JP5;S103-p PQAAKSPSPVQGKKS 0.354945354172761 0.00619988866526825 0.173666666666667 0.518333333333333 8.358714746053 31.8096090223603 0.173666666666667 0.518333333333333 0.145924604661571 0.000659233240657555 1.69733799654539 6.9901934827717 Q96JP5 ZFP91 Q96JP5.S103.p_ZFP91 Q96JP5_S103s _1_1_103_103 Q96JP5 Q96JP5|Q96JP5-2 E3 ubiquitin-protein ligase ZFP91 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8757.8757.4 17.22 17.22 1.183 5 1 1 0 899.2416 3513.9745 S103s Hydrogen 82 (R) SSPSARPPDVPGQQPQAAKSPsPVQGKK (S) S(0.0)S(0.0)PS(0.0)ARPPDVPGQQPQAAKS(0.0)PS(0.99)PVQGKK K:TMT10-Lys-Only,s:Phosphorylated S ZFP91 64299.7 9 2 1081.1 179.92 HUMAN 1 8.3587 31.8096 PQADPEVSDIESRIA-p Q9BV36-3;S364-p PQADPEVSDIESRIA 0.734482909449918 0.317949694231949 0.0626666666666667 -0.101333333333333 2.53761829370936 6.5782466588482 0.0626666666666667 -0.101333333333333 0.557491397934716 0.219874737569283 0.624824191066637 -1.38660593549643 Q9BV36 MLPH Q9BV36.3.S364.p_MLPH Q9BV36-3_S364s _1_1_364_364 Q9BV36-3 Q9BV36-3 Isoform 3 of Melanophilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20071.20071.3 10.34 10.34 2.43 3 1 1 0 735.6944 2125.0974 S364s TMT10 352 (K) SVGPLPQADPEVsDIESR (I) S(0.0)VGPLPQADPEVS(0.99)DIES(0.0)R s:Phosphorylated S MLPH 53268.4 1 14 496.2 293.1 HUMAN 1 2.5376 -6.5782 PQAKWLKSPTTPIDP-p Q08AD1;S862-p PQAKWLKSPTTPIDP 0.0350618685416583 0.00977013112430698 -0.632666666666667 -0.490333333333333 33.887604829013 28.295824399883 -0.632666666666667 -0.490333333333333 0.000408544640054338 0.00148053118662843 -7.70786420914933 -5.92123019883512 Q08AD1 CAMSAP2 Q08AD1.S862.p_CAMSAP2 Q08AD1_S862s _1_1_862_862 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13936.13936.2 11.5 6.14 1.615 3 1 1 0 811.9256 1542.8779 S862s TMT10 862 (K) sPTTPIDPEK (Q) S(0.99)PT(0.0)T(0.0)PIDPEK K:TMT10,s:Phosphorylated S CAMSAP2 169284 3 12 28.2 931.95 HUMAN 1 -33.8876 -28.2958 PQAPGRGSLRKTRPL-p P78345;S12-p PQAPGRGSLRKTRPL 0.893977543443334 0.124599442842697 0.02 0.165333333333333 0.951022191478262 11.9299035491109 0.02 0.165333333333333 0.803337019874696 0.0641223817134623 0.261547331798202 2.31875856704482 P78345 RPP38 P78345.S12.p_RPP38 P78345_S12s _1_1_12_12 P78345 P78345|Q5VUC9 Ribonuclease P protein subunit p38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7331.7331.3 10.53 10.53 99 1 1 1 0 577.6481 1650.9601 S12s Acetyl 2 (M) AAAPQAPGRGsLRK (T) AAAPQAPGRGS(1.0)LRK K:TMT10,s:Phosphorylated S RPP38 32062 1 1 2778.1 70.95 HUMAN 1 0.951 11.9299 PQAPQRRSAPELPEG-p Q3KR16;S645-p PQAPQRRSAPELPEG 0.120738540473835 0.00368648074780645 -0.303 -0.682333333333333 19.0818546492703 36.1272660289986 -0.303 -0.682333333333333 0.0123541973628978 0.000243934595239596 -3.68461817935034 -8.51860463762146 Q3KR16 PLEKHG6 Q3KR16.S645.p_PLEKHG6 Q3KR16_S645s _1_1_645_645 Q3KR16 Q3KR16|Q3KR16-2|Q3KR16-3 Pleckstrin homology domain-containing family G member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24740.24740.3 14.05 9.41 99 1 1 1 0 564.6504 1611.9722 S645s TMT10 645 (R) sAPELPEGILK (G) S(1.0)APELPEGILK K:TMT10,s:Phosphorylated S PLEKHG6 89357.9 3 1 2971.1 64.36 HUMAN 1 -19.0819 -36.1273 PQARALASQLQDSLK-p P18206-2;S574-p PQARALASQLQDSLK 0.397840397989355 0.130332427127905 -0.127666666666667 -0.215666666666667 7.3889378674719 11.6627884204652 -0.127666666666667 -0.215666666666667 0.182434181801794 0.0681900734051364 -1.52893752485236 -2.27156535487323 P18206 VCL P18206.2.S574.p_VCL P18206-2_S574s _1_1_574_574 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23741.23741.2 15.17 10.61 6.117 2 1 1 0 856.473 1631.9732 S574s TMT10 571 (R) ALAsQLQDSLK (D) ALAS(0.99)QLQDS(0.0)LK K:TMT10,s:Phosphorylated S VCL 117290.9 2 10 319.1 365.38 HUMAN 1 -7.3889 -11.6628 PQARPLPSPGAAGAQ-p O15417;S1359-p PQARPLPSPGAAGAQ 0.249176942335704 0.0933407931117027 -0.265666666666667 0.345 11.5151775810938 13.6219621092196 -0.265666666666667 0.345 0.0705475996859241 0.0434313960117547 -2.24662374877883 2.62224656090648 O15417 TNRC18 O15417.S1359.p_TNRC18 O15417_S1359s _1_1_1359_1359 O15417 O15417|H9KVB4|O15417-2|O15417-3 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21375.21375.3 19.48 19.48 99 1 1 1 0 649.0228 1865.0897 S1359s TMT10 1356 (R) PLPsPGAAGAQALEK (L) PLPS(1.0)PGAAGAQALEK K:TMT10,s:Phosphorylated S TNRC18 316168 2 11 75.1 647.68 HUMAN 1 -11.5152 13.622 PQASAIPSPGKFRSP-p Q9P270;S456-p PQASAIPSPGKFRSP 0.300894514011187 0.00485912719490688 -0.162666666666667 -0.572666666666667 9.79546426017673 33.792573739052 -0.162666666666667 -0.572666666666666 0.104822273273205 0.000417582823150473 -1.94619653594068 -7.66012001990127 Q9P270 SLAIN2 Q9P270.S456.p_SLAIN2 Q9P270_S456s _1_1_456_456 Q9P270 Q9P270 SLAIN motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15099.15099.3 15.83 15.83 5.946 2 1 1 0 617.3271 1769.9984 S456s TMT10 447 (R) MQPQASAIPsPGK (F) MQPQAS(0.0)AIPS(0.99)PGK K:TMT10,s:Phosphorylated S SLAIN2 62770.5 5 17 277.1 389.63 HUMAN 1 -9.7955 -33.7926 PQASGYHSEGETLKE-p Q70EL1;S481-p PQASGYHSEGETLKE 0.668315561863661 0.100310106219423 -0.0596666666666667 0.179666666666667 3.27346881207804 13.1967616157844 -0.0596666666666667 0.179666666666667 0.470601295931449 0.0478987123376614 -0.775430054632237 2.54516172803164 Q70EL1 USP54 Q70EL1.S481.p_USP54 Q70EL1_S481s _1_1_481_481 Q70EL1 Q70EL1|Q70EL1-7|Q70EL1-6 Inactive ubiquitin carboxyl-terminal hydrolase 54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8378.8378.3 20.8 20.8 3.904 4 1 1 0 900.7863 2620.3822 S481s TMT10 470 (R) KGDEPQASGYHsEGETLK (E) KGDEPQAS(0.0)GY(0.0)HS(0.99)EGET(0.0)LK K:TMT10,s:Phosphorylated S USP54 189724.2 9 4 525.1 282.54 HUMAN 1 -3.2735 13.1968 PQATSAPSPAPKQSF-p A8CG34;S674-p PQATSAPSPAPKQSF 0.152434937700836 0.126918475511409 -0.386 -0.206 16.4288726123952 11.8169280818606 -0.386 -0.206 0.0227568810131772 0.065812318651303 -3.1509775617665 -2.29877777693744 A8CG34 NotFound A8CG34.S674.p_NotFound A8CG34_S674s _1_1_674_674 A8CG34 Q96HA1|A8CG34|A0A075B7F8|Q96HA1-3|A8CG34-2|A0A087WY75|Q96HA1-2 Nuclear envelope pore membrane protein POM 121C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15423.15423.4 20.96 20.96 4.302 6 1 1 0 782.6819 3047.7344 S674s TMT10 655 (K) APPTLQAETATKPQATSAPsPAPK (Q) APPT(0.0)LQAET(0.0)AT(0.0)KPQAT(0.0)S(0.0)APS(0.99)PAPK K:TMT10,s:Phosphorylated S POM121C 125455.9 2 29 133.2 532.02 HUMAN 1 -16.4289 -11.8169 PQDEMIVSDKEERTD-p A0A0G2JNU3;S2471-p PQDEMIVSDKEERTD 0.805134921082359 0.168705425732885 0.035 -0.150666666666667 1.81535045328903 10.1660087083398 0.035 -0.150666666666667 0.658362301351398 0.0962496434047241 0.467510339327425 -2.00973920068303 A0A0G2JNU3 NotFound A0A0G2JNU3.S2471.p_NotFound A0A0G2JNU3_S2471s _1_1_2471_2471 A0A0G2JNU3 A6H8Y1|A0A0G2JNU3|A6H8Y1-6|A6H8Y1-7 Transcription factor TFIIIB component B'' homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18162.18162.4 17.23 17.23 4.015 2 1 1 0 870.2025 3397.824 S2471s TMT10 2459 (K) NVPQLPQDEMIVsDKEERTDAAPK (S) NVPQLPQDEMIVS(0.99)DKEERT(0.0)DAAPK K:TMT10,s:Phosphorylated S BDP1 295548.6 1 8 2021.1 102.05 HUMAN 1 1.8154 -10.166 PQDLARASGRFGQDF-p Q9Y490;S1271-p PQDLARASGRFGQDF 0.126867028860092 0.149059707157952 -0.523333333333333 -0.188666666666667 18.5896359808247 10.8808654460905 -0.523333333333333 -0.188666666666667 0.0138368235230812 0.0816419662035792 -3.58259485368606 -2.13430054506549 Q9Y490 TLN1 Q9Y490.S1271.p_TLN1 Q9Y490_S1271s _1_1_1271_1271 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5907.5907.3 9.15 5.84 3.087 2 1 1 0 513.2607 1457.8022 S1271s TMT10 1262 (R) GTPQDLARAsGR (F) GT(0.0)PQDLARAS(0.99)GR s:Phosphorylated S TLN1 271930.4 1 19 267.1 395.2 HUMAN 1 -18.5896 -10.8809 PQDPDNVSLQEVEAE-p A0A087WXK5;S1441-p PQDPDNVSLQEVEAE 0.810823621577038 0.223217433693005 -0.0353333333333333 0.250666666666667 1.74957124918922 8.57835281441712 -0.0353333333333333 0.250666666666667 0.668409902091491 0.13872818952947 -0.4525997486298 1.73478060961191 A0A087WXK5 NotFound A0A087WXK5.S1441.p_NotFound A0A087WXK5_S1441s _1_1_1441_1441 A0A087WXK5 A0A087WXK5|Q9BZC7-3|J3QSS3|Q9BZC7-2 ATP-binding cassette sub-family A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30167.30167.4 28.9 28.9 9.648 6 1 1 0 1153.517 4531.1011 S1441s TMT10 1414 (R) GDEGAGYTDVYGDYRPLFDNPQDPDNVsLQEVEAEALSR (V) GDEGAGY(0.0)T(0.0)DVY(0.0)GDY(0.0)RPLFDNPQDPDNVS(0.99)LQEVEAEALS(0.0)R s:Phosphorylated S ABCA2 275398.6 4 8 1069.1 180.75 HUMAN 1 -1.7496 8.5784 PQDPRLKTPPRPQGQ-p Q99942;T94-p PQDPRLKTPPRPQGQ 0.497175098488218 0.00983553432674543 -0.0926666666666667 -0.479666666666667 5.58966363883998 28.248127786328 -0.0926666666666667 -0.479666666666667 0.276079167130845 0.0014968808120566 -1.21110392786161 -5.90766905918227 Q99942 RNF5 Q99942.T94.p_RNF5 Q99942_T94t _1_1_94_94 Q99942 Q99942 E3 ubiquitin-protein ligase RNF5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6217.6217.5 9.79 5.37 7.848 2 1 1 0 491.4767 2373.3879 T94t TMT10 92 (R) LKtPPRPQGQRPAPESR (G) LKT(0.99)PPRPQGQRPAPES(0.0)R K:TMT10,t:Phosphorylated T RNF5 20280.4 4 1 6750.1 9.79 HUMAN 1 -5.5897 -28.2481 PQDPRPLSPGALQLA-p Q8TEK3;S834-p PQDPRPLSPGALQLA 0.191257084112308 0.160822297671947 -0.21 -0.170333333333333 14.0264126507702 10.4373502663838 -0.21 -0.170333333333333 0.0395693334806256 0.0904200979920417 -2.69776918703069 -2.05693312821533 Q8TEK3 DOT1L Q8TEK3.S834.p_DOT1L Q8TEK3_S834s _1_1_834_834 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23338.23338.3 14.17 10.28 11.327 2 1 1 0 871.477 2532.455 S834s TMT10 825 (K) LSPQDPRPLsPGALQLAGEK (S) LS(0.0)PQDPRPLS(0.99)PGALQLAGEK K:TMT10,s:Phosphorylated S DOT1L 185648.6 1 11 132.1 534.85 HUMAN 1 -14.0264 -10.4374 PQDSRRRSPQEGPTW-p J3KQR7;S773-p PQDSRRRSPQEGPTW 0.109713966983556 0.0823409353972692 0.352666666666667 -0.233666666666667 20.0950582593477 14.366568163293 0.352666666666667 -0.233666666666667 0.00978349830416781 0.0365883802303218 3.89938065402403 -2.7587653139116 J3KQR7 NotFound J3KQR7.S773.p_NotFound J3KQR7_S773s _1_1_773_773 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7138.7138.2 13.71 13.71 13.713 3 1 1 0 612.756 1144.5382 S773s Hydrogen 773 (R) sPQEGPTWSR (G) S(0.99)PQEGPT(0.0)WS(0.0)R s:Phosphorylated S CEP170B 172326.6 2 16 51.1 746.11 HUMAN 1 20.0951 -14.3666 PQEEQRGSLQDSVMN-p Q5THJ4;S926-p PQEEQRGSLQDSVMN 0.542707205712827 0.0588440653668338 -0.0863333333333334 0.258 4.89887226556221 16.3900575572098 -0.0863333333333334 0.258 0.323677695551013 0.0229611821737026 -1.08549292059758 3.14116136605243 Q5THJ4 VPS13D Q5THJ4.S926.p_VPS13D Q5THJ4_S926s_1_1_926_926 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.34930.34930.4 18.08 18.08 2.706 5 1 1 0 952.4872 3725.9482 S926s N933n TMT10 917 (K) IFPQEEQRGsLQDSVMnLTQSIVLLEQHTR (E) IFPQEEQRGS(0.99)LQDS(0.0)VMN(1.0)LT(0.0)QS(0.0)IVLLEQHT(0.0)R s:Phosphorylated S,n:Deamidated VPS13D 495672.3 1 2 124.1 545.31 HUMAN 1 -4.8989 16.3901 PQEMEVDSEDEKDPE-p Q15022;S583-p PQEMEVDSEDEKDPE 0.966490451651987 0.284847950589105 0.00633333333333333 -0.13 0.286454150888711 7.19323697872109 0.00633333333333333 -0.13 0.936169709130425 0.190843029528237 0.083877247394413 -1.49437338541654 Q15022 SUZ12 Q15022.S583.p_SUZ12 Q15022_S583s _1_1_583_583 Q15022 Q15022|J3QQW9 Polycomb protein SUZ12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25348.25348.5 21 21 3.81 4 1 1 0 855.4053 4193.036 S583s TMT10 564 (R) LYFHSDTCLPLRPQEMEVDsEDEKDPEWLR (E) LY(0.0)FHS(0.0)DT(0.0)CLPLRPQEMEVDS(0.99)EDEKDPEWLR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SUZ12 83795 12 4 1074.1 180.59 HUMAN 1 0.2865 -7.1932 PQEPLVISPINTRAR-p O60673;S2183-p PQEPLVISPINTRAR 0.530635019877545 0.914445065952936 -0.122666666666667 -0.011 5.09377456068428 0.545583336550635 -0.122666666666667 -0.011 0.309472842506851 0.881945332866923 -1.12121534519859 -0.155642506913605 O60673 REV3L O60673.S2183.p_REV3L O60673_S2183s _1_1_2183_2183 O60673 O60673|O60673-2 DNA polymerase zeta catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20060.20060.3 11.18 11.18 1.45 4 1 1 0 778.3871 2253.1746 S2183s TMT10 2171 (K) SPCSEPQEPLVIsPINTR (A) S(0.0)PCS(0.0)EPQEPLVIS(0.99)PINT(0.0)R C:Carbamidomethylation,s:Phosphorylated S REV3L 356192.6 1 13 524.1 282.7 HUMAN 1 -5.0938 -0.5456 PQESRSLSPSHLTED-p Q5T200;S877-p PQESRSLSPSHLTED 0.647835265785542 0.516620052080327 0.0646666666666667 -0.062 3.53185828998013 3.851462676763 0.0646666666666666 -0.062 0.443418870127595 0.411958750589336 0.826514834675901 -0.888481505286179 Q5T200 ZC3H13 Q5T200.S877.p_ZC3H13 Q5T200_S877s _1_1_877_877 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7750.7750.4 16.11 16.11 1.103 4 1 1 0 473.7364 1811.9561 S877s TMT10 875 (R) SLsPSHLTEDRQGR (W) S(0.0)LS(0.99)PS(0.0)HLT(0.0)EDRQGR s:Phosphorylated S ZC3H13 197316.7 8 16 24.1 987.82 HUMAN 1 3.5319 -3.8515 PQEVQDVSLLEKITD-p Q9NQG5;S212-p PQEVQDVSLLEKITD 0.74587727060098 0.532695933799452 0.049 -0.0876666666666667 2.41649610614765 3.67822302293909 0.049 -0.0876666666666667 0.573258350086094 0.428723902940098 0.599182769338904 -0.854962756363289 Q9NQG5 RPRD1B Q9NQG5.S212.p_RPRD1B Q9NQG5_S212s _1_1_212_212 Q9NQG5 Q9NQG5 Regulation of nuclear pre-mRNA domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29768.29768.3 9.51 9.51 9.51 2 1 1 0 769.7603 2227.295 S212s TMT10 201 (K) IASLPQEVQDVsLLEK (I) IAS(0.0)LPQEVQDVS(0.99)LLEK K:TMT10,s:Phosphorylated S RPRD1B 37013.2 1 3 1310.1 155.23 HUMAN 1 2.4165 -3.6782 PQGEEEESMETQE__-p Q12905;S385-p PQGEEEESMETQE__ 0.901179039534941 0.279482640255134 0.02 -0.149666666666667 0.886793419753108 7.2944733770688 0.02 -0.149666666666667 0.815306036849563 0.186445824765484 0.245235606321199 -1.51203161194355 Q12905 ILF2 Q12905.S385.p_ILF2 Q12905_S385s _1_1_385_385 Q12905 Q12905|B4DY09 Interleukin enhancer-binding factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11155.11155.5 24.07 15.64 1.612 4 1 1 0 999.0567 4911.3183 S385s TMT10 357 (K) AYEKPPEKKEGEEEEENTEEPPQGEEEEsMETQE (-) AY(0.0)EKPPEKKEGEEEEENT(0.0)EEPPQGEEEES(0.99)MET(0.0)QE K:TMT10,s:Phosphorylated S ILF2 43289.6 3 4 2814.1 69.64 HUMAN 1 0.8868 -7.2945 PQGEHARSPQPRGPA-p Q4ZG55;S1160-p PQGEHARSPQPRGPA 0.640740678597868 0.150254770317429 0.0876666666666667 0.207 3.61012764225596 10.8326770004149 0.0876666666666667 0.207 0.435499073868056 0.0825528934924754 0.841830747211309 2.1258791942835 Q4ZG55 GREB1 Q4ZG55.S1160.p_GREB1 Q4ZG55_S1160s _1_1_1160_1160 Q4ZG55 Q4ZG55|Q4ZG55-4 Protein GREB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8044.8044.5 18.73 18.73 1.801 6 1 1 0 631.5116 3073.5613 S1160s TMT10 1136 (K) ASGSALGGESSAQPTALPQGEHARsPQPR (G) AS(0.0)GS(0.0)ALGGES(0.0)S(0.0)AQPT(0.0)ALPQGEHARS(0.99)PQPR s:Phosphorylated S GREB1 219316 4 7 1072.1 180.69 HUMAN 1 3.6101 10.8327 PQGFIALSQVLMFSI-p Q8TDV0;S291-p PQGFIALSQVLMFSI 0.228095422318106 0.545474470168617 0.258333333333333 0.113 12.3350581554524 3.53989241368339 0.258333333333333 0.113 0.0584109385355638 0.442599336591862 2.3919094641204 0.827961477512204 Q8TDV0 GPR151 Q8TDV0.S291.p_GPR151 Q8TDV0_S291s_1_1_291_291 Q8TDV0 Q8TDV0 Probable G-protein coupled receptor 151 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14840.14840.5 8.35 8.35 1.848 5 1 1 0 984.3079 4821.6128 S291s M309m TMT10 278 (K) AAGPAPPQGFIALsQVLMFSISSANPLIFLVmSEEFREGLK (G) AAGPAPPQGFIALS(0.99)QVLM(0.0)FS(0.0)IS(0.0)S(0.0)ANPLIFLVM(0.99)S(0.0)EEFREGLK K:TMT10,s:Phosphorylated S,m:Oxidized methionine GPR151 47035.7 1 1 6981.1 8.35 HUMAN 1 12.3351 3.5399 PQGKRPASPALLLPP-p Q9HAW0;S353-p PQGKRPASPALLLPP 0.678817626765682 0.307165805716759 -0.0616666666666667 -0.105 3.14938825424032 6.77408185986176 -0.0616666666666667 -0.105 0.484240572745985 0.210180206317157 -0.750594791634601 -1.42102658044825 Q9HAW0 BRF2 Q9HAW0.S353.p_BRF2 Q9HAW0_S353s _1_1_353_353 Q9HAW0 Q9HAW0|Q9HAW0-2 Transcription factor IIIB 50 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26589.26795.3 16.38 16.38 99 1 1 1 0 734.7484 2122.2645 S353s TMT10 350 (K) RPAsPALLLPPCMLK (S) RPAS(1.0)PALLLPPCMLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRF2 47445.5 9 1 2140.1 96.01 HUMAN 1 -3.1494 -6.7741 PQILTSPSPSKSIPI-p P15056;S335-p PQILTSPSPSKSIPI 0.253566244688488 0.101587514049587 -0.235333333333333 -0.448666666666667 11.3508298001797 13.1228844266734 -0.235333333333333 -0.448666666666667 0.0732684526792032 0.0487204798839517 -2.21768982800887 -2.53182895221856 P15056 BRAF P15056.S335.p_BRAF P15056_S335s _1_1_335_335 P15056 P15056 Serine/threonine-protein kinase B-raf HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28199.28199.5 30.15 30.15 1.8 13 1 1 0 1029.1108 5061.5733 S335s TMT10 294 (K) FFEHHPIPQEEASLAETALTSGSSPSAPASDSIGPQILTSPsPSK (S) FFEHHPIPQEEAS(0.0)LAET(0.0)ALT(0.0)S(0.0)GS(0.0)S(0.0)PS(0.0)APAS(0.0)DS(0.0)IGPQILT(0.0)S(0.0)PS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S BRAF 85177.1 1 18 441.1 311.96 HUMAN 1 -11.3508 -13.1229 PQIQATISPPLQPKT-p A0A087WYN9;S200-p PQIQATISPPLQPKT 0.239517058977934 0.481872898791056 0.183 0.083 11.8648666434811 4.23238377143092 0.183 0.083 0.0650898597333917 0.377365004586583 2.30838841417691 0.961127606859326 A0A087WYN9 NotFound A0A087WYN9.S200.p_NotFound A0A087WYN9_S200s _1_1_200_200 A0A087WYN9 A0A087WYN9|Q7Z478 ATP-dependent RNA helicase DHX29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24696.24696.2 19.73 16.53 2.157 3 1 1 0 1209.6638 2338.3535 S200s TMT10 190 (K) FQSPQIQATIsPPLQPK (T) FQS(0.0)PQIQAT(0.0)IS(0.99)PPLQPK K:TMT10,s:Phosphorylated S DHX29 156372.9 3 5 2368.1 86.39 HUMAN 1 11.8649 4.2324 PQIRASPSPQPSSQP-p B5MBZ0;S146-p PQIRASPSPQPSSQP 0.805134921082359 0.244729176917365 -0.0376666666666667 0.116 1.8141353980975 8.05522740007437 -0.0376666666666667 0.116 0.65854652161649 0.156486637942081 -0.467235900129674 1.64421481616763 B5MBZ0 EML4 B5MBZ0.S146.p_EML4 B5MBZ0_S146s _1_1_146_146 B5MBZ0 B5MBZ0|Q9HC35 Echinoderm microtubule-associated protein-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9359.9359.3 16.88 16.88 1.415 4 1 1 0 680.3464 1959.0609 S146s TMT10 143 (R) ASPsPQPSSQPLQIHR (Q) AS(0.0)PS(0.99)PQPS(0.0)S(0.0)QPLQIHR s:Phosphorylated S EML4 111259.7 6 4 586.1 265.11 HUMAN 1 -1.8141 8.0552 PQIRRPRSLSSPTVT-p Q96PU5;S446-p PQIRRPRSLSSPTVT 0.656105705071603 0.673586336254227 -0.078 -0.0426666666666666 3.43420322974344 2.3471778544852 -0.078 -0.0426666666666666 0.453502491134504 0.582481604770343 -0.807304586439734 -0.584312292914039 Q96PU5 NEDD4L Q96PU5.S446.p_NEDD4L Q96PU5_S446s _1_1_446_446 Q96PU5 A0A1B0GVY1|Q96PU5|Q96PU5-7|Q96PU5-5|Q96PU5-6|Q96PU5-2|Q96PU5-4|Q96PU5-9 E3 ubiquitin-protein ligase NEDD4-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25109.25109.2 14.37 14.37 1.2 6 1 1 0 1098.601 2116.2266 S446s TMT10 446 (R) sLSSPTVTLSAPLEGAK (D) S(0.99)LS(0.0)S(0.0)PT(0.0)VT(0.0)LS(0.0)APLEGAK K:TMT10,s:Phosphorylated S NEDD4L 112272 6 11 495.1 293.21 HUMAN 1 -3.4342 -2.3472 PQKPAPVSPESVKAT-p Q96JM3;S214-p PQKPAPVSPESVKAT 0.44580393408586 0.135865093863222 -0.162333333333333 0.174333333333333 6.4710548658306 11.4235612115107 -0.162333333333333 0.174333333333333 0.225369174234734 0.0720516413957734 -1.36806793256436 2.22943718784713 Q96JM3 CHAMP1 Q96JM3.S214.p_CHAMP1 Q96JM3_S214s _1_1_214_214 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20784.20784.3 16.81 16.81 2.374 3 1 1 0 974.5507 2841.6693 S214s TMT10 199 (K) LAPVPSPEPQKPAPVsPESVK (A) LAPVPS(0.0)PEPQKPAPVS(0.99)PES(0.0)VK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 2 5 25.1 950.05 HUMAN 1 -6.4711 11.4236 PQKQYPDSPHPVPHR-p Q5VT52;S965-p PQKQYPDSPHPVPHR 0.742723903408587 0.696012785415873 0.0456666666666667 -0.0413333333333333 2.45380784856011 2.16292296185243 0.0456666666666667 -0.0413333333333333 0.568354385139976 0.607725841725017 0.607110414662378 -0.544522493122243 Q5VT52 RPRD2 Q5VT52.S965.p_RPRD2 Q5VT52_S965s _1_1_965_965 Q5VT52 Q5VT52|Q5VT52-3|Q5VT52-2 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5217.5217.3 12.1 12.1 5.382 2 1 1 0 580.2798 1658.8601 S965s TMT10 961 (K) QYPDsPHPVPHR (S) QY(0.0)PDS(0.99)PHPVPHR s:Phosphorylated S RPRD2 156473.2 3 24 172.1 488.65 HUMAN 1 2.4538 -2.1629 PQLHFLDTDDEVSPT-p Q86US8;T479-p PQLHFLDTDDEVSPT 0.360856931586133 0.941024540665112 0.127 -0.00833333333333332 8.23003188304064 0.376591340014855 0.127 -0.00833333333333332 0.150313093105217 0.916939889097879 1.67504317560337 -0.109241823837651 Q86US8 SMG6 Q86US8.T479.p_SMG6 Q86US8_T479t _1_1_479_479 Q86US8 Q86US8 Telomerase-binding protein EST1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23996.23996.3 25.08 25.08 5.934 7 1 1 0 1014.4629 2961.4064 T479t TMT10 469 (K) TQTPQLHFLDtDDEVSPTSWGDSR (Q) T(0.0)QT(0.0)PQLHFLDT(0.99)DDEVS(0.0)PT(0.0)S(0.0)WGDS(0.0)R t:Phosphorylated T SMG6 161600 2 2 1491.1 137.14 HUMAN 1 8.23 -0.3766 PQLKEAQSEKEEAPK-p Q92547;S896-p PQLKEAQSEKEEAPK 0.366525683885644 0.201973299909922 0.212 -0.163333333333333 8.09223282436086 9.13894063101789 0.212 -0.163333333333333 0.15515890913118 0.121928698176925 1.6511568530018 -1.83174685819383 Q92547 TOPBP1 Q92547.S896.p_TOPBP1 Q92547_S896s _1_1_896_896 Q92547 Q92547 DNA topoisomerase 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8866.8866.5 7.13 7.13 99 1 1 1 0 544.3074 2637.5382 S896s TMT10 893 (K) EAQsEKEEAPKPLHK (V) EAQS(1.0)EKEEAPKPLHK K:TMT10,s:Phosphorylated S TOPBP1 172786.5 1 11 1135.1 173.67 HUMAN 1 8.0922 -9.1389 PQLPEKASPPASPPI-p Q8NEZ4-3;S4357-p PQLPEKASPPASPPI 0.564658894212854 0.0134399239574354 -0.105666666666667 0.501333333333333 4.57452796336353 26.0222572146857 -0.105666666666667 0.501333333333333 0.34877649074965 0.00249904616262939 -1.02547707644705 5.30045913826005 Q8NEZ4 KMT2C Q8NEZ4.3.S4357.p_KMT2C Q8NEZ4-3_S4357sS4361s_2_2_4357_4361 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32267.32267.5 15.12 15.12 99 2 2 2 0 745.3902 3562.9764 S4357s S4361s TMT10 4356 (K) AsPPAsPPIAFPPAFEAAQVEAKPDELK (V) AS(1.0)PPAS(1.0)PPIAFPPAFEAAQVEAKPDELK K:TMT10,s:Phosphorylated S KMT2C 554869.1 2 28 88.1 626.31 HUMAN 1 -4.5745 26.0223 PQLQVEQSGEGSPEE-p Q9ULL5-3;S1921-p PQLQVEQSGEGSPEE 0.367025688083901 0.503292322528713 0.174 0.07 8.08197077270099 3.99385326936507 0.174 0.07 0.155525971452242 0.398671025303239 1.64937743086132 0.915799536498466 Q9ULL5 PRR12 Q9ULL5.3.S1921.p_PRR12 Q9ULL5-3_S1921s _1_1_1921_1921 Q9ULL5-3 Q9ULL5-3 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.31249.31249.4 12.85 10.46 1.238 5 1 1 0 893.4338 3490.7449 S1921s Hydrogen 1900 (R) LSLSPALQDALHTFPQLQVEQsGEGSPEEGAVR (L) LS(0.0)LS(0.0)PALQDALHT(0.0)FPQLQVEQS(0.99)GEGS(0.0)PEEGAVR s:Phosphorylated S PRR12 212010 8 20 182.1 477.91 HUMAN 1 8.082 3.9939 PQLRKVTSPLQSPTK-p E9PKC0;S903-p PQLRKVTSPLQSPTK 0.171188735836612 0.109198231948988 -0.239 -0.284333333333333 15.276997247363 12.7063808343512 -0.239 -0.284333333333333 0.029668820104839 0.0536243346372326 -2.93056549553832 -2.45697868414578 E9PKC0 PLEKHA7 E9PKC0.S903.p_PLEKHA7 E9PKC0_S903s _1_1_903_903 E9PKC0 E9PKC0|Q6IQ23-2|Q6IQ23-3 Pleckstrin homology domain-containing family A member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14368.14368.2 7.07 7.07 1.184 4 1 1 0 798.4445 1515.9147 S903s TMT10 901 (K) VTsPLQSPTK (A) VT(0.0)S(0.99)PLQS(0.0)PT(0.0)K K:TMT10,s:Phosphorylated S PLEKHA7 144991.9 2 9 809.1 221.2 HUMAN 1 -15.277 -12.7064 PQLSRAPSQAAESSP-p Q8NFH8-4;S543-p PQLSRAPSQAAESSP 0.270982153128896 0.00908726168906131 0.213333333333333 0.628333333333333 10.7487039681744 28.8804475907147 0.213333333333333 0.628333333333334 0.0841646270235153 0.00129406246646675 2.11214034331881 6.08941701579922 Q8NFH8 REPS2 Q8NFH8.4.S543.p_REPS2 Q8NFH8-4_S543s _1_1_543_543 Q8NFH8-4 Q8NFH8|Q8NFH8-4|Q8NFH8-2|Q8NFH8-3 Isoform 4 of RalBP1-associated Eps domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7682.7682.3 14.76 11.26 5.486 3 1 1 0 680.3764 1959.1478 S543s TMT10 541 (R) APsQAAESSPAKK (D) APS(0.99)QAAES(0.0)S(0.0)PAKK K:TMT10,s:Phosphorylated S REPS2 71917.6 2 13 226.3 425.21 HUMAN 1 10.7487 28.8804 PQLYRSVSFKLLERW-p Q96PE2;S15-p PQLYRSVSFKLLERW 0.155306054967913 0.0272679844954057 1.69766666666667 -1.78466666666667 16.2481714278058 21.2199593175311 1.69766666666667 -1.78466666666667 0.0237237236928766 0.00755099301013417 3.1159879717743 -4.14161600792796 Q96PE2 ARHGEF17 Q96PE2.S15.p_ARHGEF17 Q96PE2_S15s _1_1_15_15 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20747.20747.3 10.3 10.3 2.109 2 1 1 0 539.6457 1536.9514 S15s TMT10 13 (R) SVsFKLLER (W) S(0.0)VS(0.99)FKLLER K:TMT10,s:Phosphorylated S ARHGEF17 223779.6 1 1 30.1 908.19 HUMAN 1 16.2482 -21.22 PQMVKSPSFGGASEA-p Q8WVT3;S184-p PQMVKSPSFGGASEA 0.481901097526115 0.81873281086059 0.103666666666667 -0.0293333333333333 5.83277607250433 1.2149491887907 0.103666666666667 -0.0293333333333333 0.261049215700859 0.75597090493004 1.25471615959372 -0.326926605593318 Q8WVT3 TRAPPC12 Q8WVT3.S184.p_TRAPPC12 Q8WVT3_S184s _1_1_184_184 Q8WVT3 Q8WVT3 Trafficking protein particle complex subunit 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9471.9471.3 15.87 15.87 1.364 4 1 1 0 511.5699 1452.728 S184s TMT10 182 (K) SPsFGGASEASAR (T) S(0.0)PS(0.99)FGGAS(0.0)EAS(0.0)AR s:Phosphorylated S TRAPPC12 79830.1 4 3 2064.1 99.88 HUMAN 1 5.8328 -1.2149 PQNERANSLDNERCP-p Q86VP3-2;S453-p PQNERANSLDNERCP 0.231984670450118 0.429405188864421 0.189333333333333 0.0936666666666667 12.2049416985518 4.88824315762656 0.189333333333333 0.0936666666666667 0.0601874342650002 0.324470848317087 2.36873913240287 1.08332291251086 Q86VP3 PACS2 Q86VP3.2.S453.p_PACS2 Q86VP3-2_S453s _1_1_453_453 Q86VP3-2 Q86VP3-2|Q86VP3-3|F8VW41|Q86VP3-4 Isoform 2 of Phosphofurin acidic cluster sorting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2942.2942.2 14.23 9.01 99 1 1 1 0 799.3256 1517.6761 S453s Hydrogen 451 (R) ANsLDNERCPDAR (S) ANS(1.0)LDNERCPDAR C:Carbamidomethylation,s:Phosphorylated S PACS2 100425.5 6 5 1483.1 138.31 HUMAN 1 12.2049 4.8882 PQNFSVPSPGPLNTP-p Q96RN5;S505-p PQNFSVPSPGPLNTP 0.91809903270839 0.170567885157489 0.0223333333333333 0.161666666666667 0.725070484055571 10.098098851842 0.0223333333333333 0.161666666666667 0.846238834617324 0.0977665105611596 0.203418399166736 1.99794196122574 Q96RN5 MED15 Q96RN5.S505.p_MED15 Q96RN5_S505s_1_1_505_505 Q96RN5 Q96RN5|Q96RN5-2|G3V1P5|Q96RN5-3 Mediator of RNA polymerase II transcription subunit 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23004.23004.5 15.6 12.21 1.147 10 1 1 0 928.8512 4544.2655 S505s M519m TMT10 497 (R) TPQNFSVPsPGPLNTPVNPSSVmSPAGSSQAEEQQYLDK (L) T(0.0)PQNFS(0.0)VPS(0.99)PGPLNT(0.0)PVNPS(0.0)S(0.0)VM(1.0)S(0.0)PAGS(0.0)S(0.0)QAEEQQY(0.0)LDK K:TMT10,s:Phosphorylated S,m:Oxidized methionine MED15 87208.4 11 1 3276.1 55.22 HUMAN 1 0.7251 10.0981 PQNKMKKSPVGSWRS-p A7KAX9;S655-p PQNKMKKSPVGSWRS 0.454180425050792 0.676964652434075 -0.165666666666667 0.044 6.32193826720818 2.3148043478517 -0.165666666666667 0.044 0.233241686643365 0.58683980649223 -1.34171795604478 0.577370652240256 A7KAX9 ARHGAP32 A7KAX9.S655.p_ARHGAP32 A7KAX9_S655s _1_1_655_655 A7KAX9 A7KAX9|A7KAX9-2|G3V174|Q8WWP7 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10555.10555.2 7.49 0.81 2.94 2 1 1 0 549.271 1017.5679 S655s TMT10 655 (K) sPVGSWR (S) S(0.99)PVGS(0.0)WR s:Phosphorylated S ARHGAP32 232236.5 2 6 159.1 497.4 HUMAN 1 -6.3219 2.3148 PQNLDSESESGSSIA-p Q15648;S1465-p PQNLDSESESGSSIA 0.887925520796663 0.232919094154321 0.0205 0.19 1.00468365182763 8.33366214216901 0.0205 0.19 0.793472052651174 0.146768814323096 0.275052859892955 1.6924380604276 Q15648 MED1 Q15648.S1465.p_MED1 Q15648_S1463sS1465s_2_2_1463_1465 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18616.18616.3 18.29 18.29 1.21 8 2 2 0 972.4406 2755.3674 S1463s S1465s TMT10 1453 (K) SPAYTPQNLDsEsESGSSIAEK (S) S(0.0)PAY(0.0)T(0.0)PQNLDS(0.99)ES(0.99)ES(0.0)GS(0.0)S(0.0)IAEK K:TMT10,s:Phosphorylated S MED1 169445 1 39 115.1 566.87 HUMAN 2 1.0047 8.3337 PQNMKPQSGNDKPLS-p Q9BY44;S474-p PQNMKPQSGNDKPLS 0.117289050573617 0.684579985552986 0.288 -0.098 19.3711177373811 2.25358445877858 0.288 -0.098 0.0115581473355493 0.595170715335661 3.74526639399576 -0.564186876759627 Q9BY44 EIF2A Q9BY44.S474.p_EIF2A Q9BY44_S474s _1_1_474_474 Q9BY44 Q9BY44|F8WAE5|Q9BY44-3|Q9BY44-4|Q9BY44-2 Eukaryotic translation initiation factor 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12421.12421.4 15.22 15.22 4.547 2 1 1 0 875.7154 3419.8763 S474s TMT10 461 (K) LHEEEPPQNMKPQsGNDKPLSK (T) LHEEEPPQNMKPQS(0.99)GNDKPLS(0.0)K K:TMT10,s:Phosphorylated S EIF2A 65559.4 3 4 1639.1 124.84 HUMAN 1 19.3711 -2.2536 PQNSKKQSPPKKPAP-p P56181;S53-p PQNSKKQSPPKKPAP 0.992805083039161 0.0282466576673109 -0.00166666666666667 -0.298666666666667 0.0665610785470112 20.9879523351348 -0.00166666666666666 -0.298666666666667 0.98479059460251 0.00796534821897285 -0.0199600199066887 -4.09018605039827 P56181 NDUFV3 P56181.S53.p_NDUFV3 P56181_S53s _1_1_53_53 P56181 P56181 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15607.15607.5 10.9 10.9 8.382 4 1 1 0 734.0184 3586.1017 S53s TMT10 51 (K) KQsPPKKPAPVPAEPFDNTTYK (N) KQS(0.99)PPKKPAPVPAEPFDNT(0.0)T(0.0)Y(0.0)K K:TMT10,s:Phosphorylated S NDUFV3 11997.4 1 1 1273.2 159.36 HUMAN 1 -0.0666 -20.988 PQNSKKQSPPKNVVE-p P56181-2;S53-p PQNSKKQSPPKNVVE 0.1675025767406 0.0589409426748069 0.300333333333333 -0.256666666666667 15.5038705791155 16.3811578155745 0.300333333333333 -0.256666666666667 0.0281587221218385 0.023008283419605 2.97349757707852 -3.13943884585097 P56181 NDUFV3 P56181.2.S53.p_NDUFV3 P56181-2_S53s _1_1_53_53 P56181-2 P56181-2 Isoform 2 of NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10085.10085.4 11.74 8.01 99 1 1 1 0 587.6035 2267.4257 S53s TMT10 51 (K) KQsPPKNVVEPK (E) KQS(1.0)PPKNVVEPK K:TMT10,s:Phosphorylated S NDUFV3 51040.2 3 2 1273.1 159.36 HUMAN 1 15.5039 -16.3812 PQPAAPGTPGGFSEV-p Q6P1R4;T460-p PQPAAPGTPGGFSEV 0.184005708166228 0.845772025039165 0.263333333333333 0.0353333333333334 14.4524902433725 1.02244059694044 0.263333333333333 0.0353333333333334 0.0358716187898959 0.790234416571989 2.77638200768901 0.279470370597508 Q6P1R4 DUS1L Q6P1R4.T460.p_DUS1L Q6P1R4_T460t _1_1_460_460 Q6P1R4 Q6P1R4 tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31891.31891.3 14.12 15.61 1.234 3 1 1 0 1059.168 3095.5193 T460t TMT10 445 (K) EAQPELQEPQPAAPGtPGGFSEVMGSALA (-) EAQPELQEPQPAAPGT(0.99)PGGFS(0.0)EVMGS(0.0)ALA t:Phosphorylated T DUS1L 54370.5 1 1 6082.1 14.12 HUMAN 1 14.4525 1.0224 PQPDPVDTPASTKQR-p P46013;T2352-p PQPDPVDTPASTKQR 0.72898331202447 0.0883316425876896 -0.0563333333333333 -0.300333333333333 2.6072980230976 13.9480883675054 -0.0563333333333333 -0.300333333333333 0.548618183308695 0.0402894337159715 -0.639455605368605 -2.68179084437875 P46013 MKI67 P46013.T2352.p_MKI67 P46013_S2344sT2352tS2355s_3_3_2344_2355 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16390.16390.4 10.52 10.52 1.194 4 3 3 0 710.5903 2599.4369 S2344s T2352t S2355s TMT10 2340 (K) IACKsPQPDPVDtPAsTK (Q) IACKS(0.99)PQPDPVDT(0.99)PAS(0.99)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T MKI67 360912.4 3 117 5.1 1918.46 HUMAN 1 -2.6073 -13.9481 PQPDPVGTPTIFKPQ-p P46013;T2231-p PQPDPVGTPTIFKPQ 0.177944376974679 0.041636245514941 0.235 -0.53 14.8462964201852 18.5052019540566 0.235 -0.53 0.0327619963788413 0.0141084662825065 2.84967334115547 -3.56221982353177 P46013 MKI67 P46013.T2231.p_MKI67 P46013_S2223sT2231t_2_2_2223_2231 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20518.20518.5 15.71 15.71 2.281 4 2 2 0 655.145 3111.7592 S2223s T2231t TMT10 2219 (K) IACRsPQPDPVGtPTIFKPQSK (R) IACRS(0.99)PQPDPVGT(0.99)PT(0.0)IFKPQS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T MKI67 360912.4 2 109 5.1 1918.46 HUMAN 1 14.8463 -18.5052 PQPGKLRSPFLQKQL-p Q9UJU6;S283-p PQPGKLRSPFLQKQL 0.142671238520564 0.00313960863177787 -0.296666666666667 -0.687666666666667 17.2731648944337 37.580554879492 -0.296666666666667 -0.687666666666667 0.0187362861505867 0.000174559911093684 -3.31663210916174 -9.0946053799104 Q9UJU6 DBNL Q9UJU6.S283.p_DBNL Q9UJU6_S283s _1_1_283_283 Q9UJU6 Q9UJU6-3|Q9UJU6-2|B4DDD6|Q9UJU6-6|Q9UJU6-4|Q9UJU6-5 Drebrin-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16047.16047.3 10.7 6.13 99 1 1 1 0 509.6338 1446.9197 S283s TMT10 281 (K) LRsPFLQK (Q) LRS(1.0)PFLQK K:TMT10,s:Phosphorylated S DBNL 48491.7 4 8 1388.1 147.4 HUMAN 1 -17.2732 -37.5806 PQPLRHQSYILAVND-p Q5T5U3;S754-p PQPLRHQSYILAVND 0.2592179584854 0.75691340491123 0.161333333333333 -0.0373333333333333 11.1414684880259 1.67255856310034 0.161333333333333 -0.0373333333333333 0.0768870416740961 0.680368414527348 2.18091214716471 -0.43495391048204 Q5T5U3 ARHGAP21 Q5T5U3.S754.p_ARHGAP21 Q5T5U3_S754s_1_1_754_754 Q5T5U3 Q5T5U3|A0A1B0GV73|F8W9U9|Q5T5U3-3 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19052.19052.4 11.95 11.95 3.705 6 1 1 0 865.1533 3376.6178 S754s N760n TMT10 752 (R) HQsYILAVnDQETGSDTTCWLPNDARR (E) HQS(0.99)Y(0.0)ILAVN(0.99)DQET(0.0)GS(0.0)DT(0.0)T(0.0)CWLPN(0.0)DARR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated ARHGAP21 218696.3 1 12 148.1 512.52 HUMAN 1 11.1415 -1.6726 PQPNKRHSPSPRPRA-p A9Z1X7;S692-p PQPNKRHSPSPRPRA 0.424064582948113 0.174045522910667 0.184 0.232 6.86777066455585 9.98560358421553 0.184 0.232 0.205694620376117 0.100332039758565 1.43784673398913 1.9784106545223 A9Z1X7 NotFound A9Z1X7.S692.p_NotFound A9Z1X7_S692s _1_1_692_692 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.2258.2258.4 8.98 8.98 8.981 2 1 1 0 350.4379 1318.7654 S692s TMT10 690 (K) RHsPSPRPR (A) RHS(0.99)PS(0.0)PRPR s:Phosphorylated S SRRM1 103445.7 16 37 8.1 1346.57 HUMAN 1 6.8678 9.9856 PQPSPYNSPKPQHKV-p Q96PU5;S487-p PQPSPYNSPKPQHKV 0.472442563890549 0.370054053330589 -0.117666666666667 -0.095 6.00318023607802 5.72620711175712 -0.117666666666667 -0.095 0.251004770961823 0.267534188458071 -1.28513010316216 -1.23535063452195 Q96PU5 NEDD4L Q96PU5.S487.p_NEDD4L Q96PU5_S487s _1_1_487_487 Q96PU5 A0A1B0GVY1|Q96PU5|Q96PU5-9 E3 ubiquitin-protein ligase NEDD4-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10191.10191.4 21.71 21.71 1.166 6 1 1 0 804.4186 3134.6838 S487s TMT10 472 (K) DTLSNPQSPQPSPYNsPKPQHK (V) DT(0.0)LS(0.0)NPQS(0.0)PQPS(0.0)PY(0.0)NS(0.99)PKPQHK K:TMT10,s:Phosphorylated S NEDD4L 112272 3 16 495.1 293.21 HUMAN 1 -6.0032 -5.7262 PQPSQTESPQEAQII-p O96020;S21-p PQPSQTESPQEAQII 0.398002572398755 0.00112568182952083 -0.133333333333333 -1.99366666666667 7.38446661703768 49.0118524751598 -0.133333333333333 -1.99366666666667 0.182622102440125 1.2554943206608e-05 -1.52815829063606 -15.0348108807133 O96020 CCNE2 O96020.S21.p_CCNE2 O96020_S21s _1_1_21_21 O96020 O96020|Q8WUE3|O96020-2|E5RK20|E5RHN2 G1/S-specific cyclin-E2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14916.14916.2 21.71 21.71 2.221 3 1 1 0 1387.7106 2694.4463 S21s TMT10 12 (K) QQPQPSQTEsPQEAQIIQAK (K) QQPQPS(0.0)QT(0.0)ES(0.99)PQEAQIIQAK K:TMT10,s:Phosphorylated S CCNE2 47327 4 1 1638.1 124.86 HUMAN 1 -7.3845 -49.0119 PQPSRPVSPAGPPEG-p Q8WUZ0;S126-p PQPSRPVSPAGPPEG 0.0944800578821079 0.0090396054976354 -0.384333333333333 -0.501666666666667 21.8065780816039 28.9192732019793 -0.384333333333333 -0.501666666666667 0.00659693480052335 0.00128254520046902 -4.27783824927689 -6.10071673311504 Q8WUZ0 BCL7C Q8WUZ0.S126.p_BCL7C Q8WUZ0_S126s _1_1_126_126 Q8WUZ0 Q8WUZ0-2 B-cell CLL/lymphoma 7 protein family member C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13212.13212.3 19.39 16.95 2.781 5 1 1 0 1190.2421 3488.7607 S126s TMT10 110 (K) GTEPSPGGTPQPSRPVsPAGPPEGVPEEAQPPR (L) GT(0.0)EPS(0.0)PGGT(0.0)PQPS(0.0)RPVS(0.99)PAGPPEGVPEEAQPPR s:Phosphorylated S BCL7C 23524.7 4 2 2530.1 79.71 HUMAN 1 -21.8066 -28.9193 PQPTATPTLNQLLTS-p O14497;T294-p PQPTATPTLNQLLTS 0.317878531396193 0.920911162787851 0.15 0.013 9.32076452408837 0.502631494443763 0.15 0.013 0.116929353259918 0.890711071386759 1.86390419906324 0.143987112108678 O14497 ARID1A O14497.T294.p_ARID1A O14497_T294t _1_1_294_294 O14497 O14497 AT-rich interactive domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27795.27795.4 17.19 13.9 1.143 9 1 1 0 906.1948 3541.7907 T294t TMT10 271 (R) FGAMGGGGPSAAGGGTPQPTATPtLNQLLTSPSSAR (G) FGAMGGGGPS(0.0)AAGGGT(0.0)PQPT(0.0)AT(0.0)PT(0.99)LNQLLT(0.0)S(0.0)PS(0.0)S(0.0)AR t:Phosphorylated T ARID1A 242953.4 1 1 3995.1 39.48 HUMAN 1 9.3208 0.5026 PQPTNLATPNTKRFK-p P54278;T573-p PQPTNLATPNTKRFK 0.729625927010674 0.165667128256419 -0.068 -0.200666666666667 2.59939105806653 10.2668498302762 -0.068 -0.200666666666667 0.549617932617935 0.0940405189320217 -0.6377995743482 -2.02726732826284 P54278 PMS2 P54278.T573.p_PMS2 P54278_T573t _1_1_573_573 P54278 P54278|C9J167 Mismatch repair endonuclease PMS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14202.14202.3 8.24 4.04 1.499 3 1 1 0 601.6603 1722.9952 T573t Hydrogen 564 (R) VLPQPTNLAtPNTK (R) VLPQPT(0.0)NLAT(0.99)PNT(0.0)K K:TMT10-Lys-Only,t:Phosphorylated T PMS2 96993.1 1 5 1932.1 106.31 HUMAN 1 -2.5994 -10.2668 PQQILQCSPAN____-p K7ERV3;S264-p PQQILQCSPAN____ 0.787952750145453 0.115641339945814 -0.0473333333333333 -0.186666666666667 1.99498183719834 12.3580738154939 -0.0473333333333334 -0.186666666666667 0.631686821084483 0.0581022055502025 -0.507690445313296 -2.39477562722301 K7ERV3 NotFound K7ERV3.S264.p_NotFound K7ERV3_S264s _1_1_264_264 K7ERV3 K7ERV3|P04183 Thymidine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30552.30552.3 16.8 16.8 99 1 1 1 0 632.6483 1815.9625 S264s TMT10 254 (K) LFAPQQILQCsPAN (-) LFAPQQILQCS(1.0)PAN C:Carbamidomethylation,s:Phosphorylated S TK1 29392.6 7 4 2787.1 70.63 HUMAN 1 -1.995 -12.3581 PQQSLSGSPLQPIPA-p O15446-2;S130-p PQQSLSGSPLQPIPA 0.744043857023488 0.0553521969756225 0.045 -0.236 2.43809265520459 16.7466354591269 0.045 -0.236 0.570414733371767 0.0211512702413819 0.60377457049673 -3.21049676777722 O15446 CD3EAP O15446.2.S130.p_CD3EAP O15446-2_S130s _1_1_130_130 O15446-2 O15446|O15446-2 Isoform 2 of DNA-directed RNA polymerase I subunit RPA34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27783.27989.3 23.9 23.9 1.113 4 1 1 0 1211.9947 3554.0056 S130s TMT10 119 (R) ILEGPQQSLSGsPLQPIPASPPPQIPPGLRPR (F) ILEGPQQS(0.0)LS(0.0)GS(0.99)PLQPIPAS(0.0)PPPQIPPGLRPR s:Phosphorylated S CD3EAP 55456.1 13 2 1198.1 167.21 HUMAN 1 2.4381 -16.7466 PQQWNVRSPARNKDT-p P42695;S1474-p PQQWNVRSPARNKDT 0.325328300464248 0.00404124447761282 0.194333333333333 -0.649666666666667 9.13261533372537 35.2645126792013 0.194333333333333 -0.649666666666667 0.122106411043089 0.0002975423111665 1.83132177015464 -8.19210143286886 P42695 NCAPD3 P42695.S1474.p_NCAPD3 P42695_S1474s _1_1_1474_1474 P42695 P42695 Condensin-2 complex subunit D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23526.23526.4 19.01 16.09 4.201 3 1 1 0 959.9977 3757.0008 S1474s TMT10 1449 (R) SQGNDILCLSLPDKPPPQPQQWNVRsPAR (N) S(0.0)QGNDILCLS(0.0)LPDKPPPQPQQWNVRS(0.99)PAR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NCAPD3 171055.8 2 9 1254.1 161.61 HUMAN 1 9.1326 -35.2645 PQREAAFSPGQQDWS-p Q9C0C2;S1103-p PQREAAFSPGQQDWS 0.509156333549562 0.015823966033435 -0.0993333333333333 -0.399 5.41230920011064 24.887496562299 -0.0993333333333334 -0.399 0.287586887133895 0.00324526632871811 -1.17910802134438 -5.00912405616868 Q9C0C2 TNKS1BP1 Q9C0C2.S1103.p_TNKS1BP1 Q9C0C2_S1103s _1_1_1103_1103 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23093.23093.4 22.26 22.26 22.265 3 1 1 0 724.571 2815.2943 S1103s TMT10 1099 (R) EAAFsPGQQDWSRDFCIEASER (S) EAAFS(0.99)PGQQDWS(0.0)RDFCIEAS(0.0)ER C:Carbamidomethylation,s:Phosphorylated S TNKS1BP1 182819.3 5 47 4.1 2105.7 HUMAN 1 -5.4123 -24.8875 PQRERSGSESSVDQK-p Q9UQ35;S1519-p PQRERSGSESSVDQK 0.145152146047681 0.090284373754701 -0.335333333333333 0.289333333333333 17.0748591355906 13.8164293742692 -0.335333333333333 0.289333333333333 0.0196116478527321 0.041529534442162 -3.27739352116058 2.65770706559325 Q9UQ35 SRRM2 Q9UQ35.S1519.p_SRRM2 Q9UQ35_S1517sS1519s_2_2_1517_1519 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3633.3633.2 10.35 10.35 2.408 4 2 2 0 849.3535 1537.7655 S1517s S1519s Hydrogen 1515 (R) ERsGsESSVDQK (T) ERS(0.99)GS(0.99)ES(0.0)S(0.0)VDQK K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 5 214 2.1 3310.34 HUMAN 1 -17.0749 13.8164 PQRFPESYQNELDNL-p Q96BY6;Y1023-p PQRFPESYQNELDNL 0.650123190527967 0.277338803871534 -0.07 -0.208333333333333 3.50757998673125 7.33903756737497 -0.07 -0.208333333333333 0.445904650027983 0.184542433522076 -0.821749531448305 -1.51979863136703 Q96BY6 DOCK10 Q96BY6.Y1023.p_DOCK10 Q96BY6_S1022sY1023y_2_2_1022_1023 Q96BY6 Q96BY6|Q96BY6-3 Dedicator of cytokinesis protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23736.23736.5 8.78 1.12 7.97 4 2 2 0 935.6848 4514.4423 S1022s Y1023y Hydrogen 1011 (K) IQLPRPQRFPEsyQNELDNLVMVLSDHVIWKYK (D) IQLPRPQRFPES(0.99)Y(0.99)QNELDNLVMVLS(0.0)DHVIWKY(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S,y:Phosphorylated Y DOCK10 251979.7 2 7 2997.1 63.67 HUMAN 1 -3.5076 -7.339 PQRIRRVSSSGKPTS-p Q9ULD2;S760-p PQRIRRVSSSGKPTS 0.0745793811074775 0.49827024673082 -0.371666666666667 0.0953333333333333 24.1439935875182 4.04851758998413 -0.371666666666667 0.0953333333333334 0.00385124051075148 0.393684431791822 -4.83019279840751 0.926234207447314 Q9ULD2 MTUS1 Q9ULD2.S760.p_MTUS1 Q9ULD2_S760s _1_1_760_760 Q9ULD2 Q9ULD2 Microtubule-associated tumor suppressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8439.8439.4 9.63 9.63 1.225 5 1 1 0 504.2969 1934.2002 S760s TMT10 758 (R) RVsSSGKPTSLK (T) RVS(0.99)S(0.0)S(0.0)GKPT(0.0)S(0.0)LK K:TMT10,s:Phosphorylated S MTUS1 142763.7 1 7 645.1 254.81 HUMAN 1 -24.144 4.0485 PQRKNKASPQSEFMP-p Q9NQW6;S792-p PQRKNKASPQSEFMP 0.352641091277681 0.0161814539582032 -0.144 -0.429666666666667 8.40815128646921 24.7292190377206 -0.144 -0.429666666666667 0.144272936478119 0.00336572087407298 -1.70590070201188 -4.96940652749645 Q9NQW6 ANLN Q9NQW6.S792.p_ANLN Q9NQW6_S792s _1_1_792_792 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16921.16921.3 14.04 9.93 3.919 3 1 1 0 582.9573 1666.8875 S792s TMT10 791 (K) AsPQSEFMPSK (G) AS(0.99)PQS(0.0)EFMPS(0.0)K K:TMT10,s:Phosphorylated S ANLN 125566 5 45 68.1 675.08 HUMAN 1 -8.4082 -24.7292 PQRPGPPSPRRPLVP-p O00268;S109-p PQRPGPPSPRRPLVP 0.951034191918233 0.638362325358455 0.0103333333333333 -0.0516666666666666 0.430998029306532 2.65506384150115 0.0103333333333333 -0.0516666666666667 0.905524483167152 0.542617274769922 0.124353280647641 -0.649351434236404 O00268 TAF4 O00268.S109.p_TAF4 O00268_S109s _1_1_109_109 O00268 O00268 Transcription initiation factor TFIID subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3780.3780.4 10.82 10.82 99 1 1 1 0 488.2563 1870.0357 S109s TMT10 95 (R) ARPGGGGPQRPGPPsPR (R) ARPGGGGPQRPGPPS(1.0)PR s:Phosphorylated S TAF4 110397.6 2 2 1541.1 133.04 HUMAN 1 0.431 -2.6551 PQRPRSNSGRELTDE-p Q5JSH3;S344-p PQRPRSNSGRELTDE 0.48848292416817 0.0691840223047494 0.119333333333333 0.299 5.73127458112984 15.4253361326055 0.119333333333333 0.299 0.267222204142493 0.028672554488973 1.23654069814755 2.95661371923701 Q5JSH3 WDR44 Q5JSH3.S344.p_WDR44 Q5JSH3_S344s_1_1_344_344 Q5JSH3 Q5JSH3 WD repeat-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30189.30189.3 15.05 12.08 1.152 4 1 1 0 877.7838 2550.3849 N343n S344s TMT10 342 (R) SnsGRELTDEEILASVMIK (N) S(0.0)N(1.0)S(0.99)GRELT(0.0)DEEILAS(0.0)VMIK K:TMT10,n:Deamidated,s:Phosphorylated S WDR44 101935 1 12 95.1 607.92 HUMAN 1 5.7313 15.4253 PQRQPEYSPESPRCQ-p Q9H6F5;S110-p PQRQPEYSPESPRCQ 0.949984753800772 0.612060067351816 -0.013 0.071 0.441337476831147 2.89752822061637 -0.013 0.071 0.903371223779242 0.513153361224757 -0.127205450453019 0.699424891699916 Q9H6F5 CCDC86 Q9H6F5.S110.p_CCDC86 Q9H6F5_S102sS110s_2_2_102_110 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11882.12001.4 8.26 8.26 1.185 4 2 2 0 728.3327 2750.3695 S102s S110s TMT10 95 (R) QQDLHLEsPQRQPEYsPESPR (C) QQDLHLES(0.99)PQRQPEY(0.0)S(0.99)PES(0.0)PR s:Phosphorylated S CCDC86 40349 6 19 346.1 352.36 HUMAN 1 -0.4413 2.8975 PQRRFSLSPSLGPQA-p Q9NYF3;S234-p PQRRFSLSPSLGPQA 0.538800686374925 0.299194645292065 -0.0906666666666667 0.0993333333333334 4.96353990619422 6.91875488002772 -0.0906666666666667 0.0993333333333334 0.318893751317047 0.203293977014588 -1.09737233250641 1.44638909331966 Q9NYF3 FAM53C Q9NYF3.S234.p_FAM53C Q9NYF3_S234s _1_1_234_234 Q9NYF3 Q9NYF3 Protein FAM53C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21772.21772.3 15.14 15.14 1.114 4 1 1 0 552.6169 1575.8692 S234s TMT10 231 (R) FSLsPSLGPQASR (F) FS(0.0)LS(0.99)PS(0.0)LGPQAS(0.0)R s:Phosphorylated S FAM53C 43832.4 2 6 976.1 192.85 HUMAN 1 -4.9635 6.9188 PQRRQSPSPSTRPIR-p A9Z1X7;S724-p PQRRQSPSPSTRPIR 0.204437470687119 0.281348453858078 0.192333333333333 0.270666666666667 13.348700831238 7.25772666468222 0.192333333333333 0.270666666666667 0.0462519360904572 0.188030081173036 2.57409492249108 1.5056243193582 A9Z1X7 NotFound A9Z1X7.S724.p_NotFound A9Z1X7_S722sS724s_2_2_722_724 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3950.3950.3 7.02 7.02 1.844 4 2 2 0 514.5712 1381.7659 S722s S724s Hydrogen 720 (R) RQsPsPSTRPIR (R) RQS(0.99)PS(0.99)PS(0.0)T(0.0)RPIR s:Phosphorylated S SRRM1 103445.7 6 72 8.1 1346.57 HUMAN 1 13.3487 7.2577 PQRSKFDSDEEEEDT-p Q8TF01;S290-p PQRSKFDSDEEEEDT 0.0721955710812666 0.00658887941689709 -0.569 -0.485666666666667 24.5912435730913 31.350876840166 -0.569 -0.485666666666667 0.00347436661042975 0.000732676590867245 -4.94099073774336 -6.84240125707305 Q8TF01 PNISR Q8TF01.S290.p_PNISR Q8TF01_S290s _1_1_290_290 Q8TF01 Q8TF01|Q8TF01-2 Arginine/serine-rich protein PNISR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14255.14255.4 20.58 20.58 1.306 5 1 1 0 793.3683 3090.4842 S290s TMT10 286 (R) SKFDsDEEEEDTENVEAASSGK (V) S(0.0)KFDS(0.99)DEEEEDT(0.0)ENVEAAS(0.0)S(0.0)GK K:TMT10,s:Phosphorylated S PNISR 92575.2 5 2 613.1 261.5 HUMAN 1 -24.5912 -31.3509 PQRTTSISPALARKN-p Q9UKE5;S680-p PQRTTSISPALARKN 0.795947364926604 0.952285258377512 0.0553333333333333 -0.0106666666666666 1.91577408213178 0.301692411832082 0.0553333333333334 -0.0106666666666666 0.643313391238846 0.932890689704295 0.49006774821076 -0.0881909128974796 Q9UKE5 TNIK Q9UKE5.S680.p_TNIK Q9UKE5_S680s _1_1_680_680 Q9UKE5 Q9UKE5|Q9UKE5-4|Q9UKE5-2|Q9UKE5-6|Q9UKE5-3|Q9UKE5-7|Q9UKE5-5|Q9UKE5-8 TRAF2 and NCK-interacting protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12383.12383.2 14.56 8.73 2.193 4 1 1 0 663.3558 1245.7364 S680s TMT10 676 (R) TTSIsPALAR (K) T(0.0)T(0.0)S(0.0)IS(0.99)PALAR s:Phosphorylated S TNIK 155453.9 6 37 131.1 535.29 HUMAN 1 1.9158 -0.3017 PQRVRGVSSESSGDR-p Q13435;S343-p PQRVRGVSSESSGDR 0.87463617951721 0.636335617761729 -0.0303333333333333 0.048 1.13805307284577 2.67249019031207 -0.0303333333333334 0.048 0.769475316102608 0.540444350047083 -0.30815788511405 0.652982393446214 Q13435 SF3B2 Q13435.S343.p_SF3B2 Q13435_S343s _1_1_343_343 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3719.3719.2 11.61 11.61 1.572 4 1 1 0 773.8511 1466.7284 S343s Hydrogen 341 (R) GVsSESSGDREK (D) GVS(0.99)S(0.0)ES(0.0)S(0.0)GDREK K:TMT10-Lys-Only,s:Phosphorylated S SF3B2 100339.9 2 8 193.1 462.57 HUMAN 1 -1.1381 2.6725 PQSAKPPSGSKSGLR-p Q8TBE0;S543-p PQSAKPPSGSKSGLR 0.850933715821347 0.00225998172643787 -0.0323333333333333 -1.22766666666667 1.35658774028558 40.9568173866682 -0.0323333333333333 -1.22766666666667 0.731713766538288 8.022657674691e-05 -0.361078667768239 -10.5702116199749 Q8TBE0 BAHD1 Q8TBE0.S543.p_BAHD1 Q8TBE0_S543s _1_1_543_543 Q8TBE0 Q8TBE0|Q8TBE0-2|Q8TBE0-3 Bromo adjacent homology domain-containing 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7211.7211.3 15.35 10.56 1.11 3 1 1 0 694.7051 2002.1359 S543s TMT10 534 (R) ACPQSAKPPsGSK (S) ACPQS(0.0)AKPPS(0.99)GS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BAHD1 85848.7 1 6 636.1 256.1 HUMAN 1 -1.3566 -40.9568 PQSDPADTPTNTKQR-p P46013;T1869-p PQSDPADTPTNTKQR 0.669236781298105 0.00215980667044864 0.0706666666666667 -0.781666666666667 3.26399268512749 41.4052493891312 0.0706666666666667 -0.781666666666667 0.471629249669803 7.23560851350933e-05 0.773540583755729 -10.7818413026477 P46013 MKI67 P46013.T1869.p_MKI67 P46013_S1864sT1869t_2_2_1864_1869 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17102.17102.3 13.61 10.26 1.104 5 2 2 0 940.7966 2660.4532 S1864s T1869t TMT10 1857 (K) ILCKSPQsDPADtPTNTK (Q) ILCKS(0.0)PQS(0.99)DPADT(0.99)PT(0.0)NT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T MKI67 360912.4 6 106 5.1 1918.46 HUMAN 1 3.264 -41.4052 PQSGRVLSAMIRGAA-p O43598;S128-p PQSGRVLSAMIRGAA 0.208993010347482 0.0395258109750821 0.187333333333333 0.287333333333333 13.1208253677141 18.8206976273264 0.187333333333333 0.287333333333333 0.0487435845122186 0.0131198913120502 2.53286197605536 3.62716378132335 O43598 DNPH1 O43598.S128.p_DNPH1 O43598_S128s _1_1_128_128 O43598 O43598 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23026.23026.2 8.08 3.93 99 1 1 1 0 549.8006 1018.6281 S128s TMT10 126 (R) VLsAMIR (G) VLS(1.0)AMIR s:Phosphorylated S DNPH1 19222.2 3 4 2326.1 87.8 HUMAN 1 13.1208 18.8207 PQSPPIASPKAITKP-p P82094-2;S77-p PQSPPIASPKAITKP 0.702689989895341 0.0122744625934258 -0.0653333333333334 -0.429 2.88020244368264 26.6788511984908 -0.0653333333333334 -0.429 0.515204628077393 0.00214839869623925 -0.695973228074066 -5.47449652674549 P82094 TMF1 P82094.2.S77.p_TMF1 P82094-2_S77s _1_1_77_77 P82094-2 P82094-2|F8WF45 Isoform 2 of TATA element modulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11346.11552.3 14.56 14.56 3.879 4 1 1 0 664.3471 1911.0588 S77s TMT10 66 (K) SNTEPQSPPIAsPK (A) S(0.0)NT(0.0)EPQS(0.0)PPIAS(0.99)PK K:TMT10,s:Phosphorylated S TMF1 123666.4 2 3 393.1 331.84 HUMAN 1 -2.8802 -26.6789 PQSSVKTSVPSSKSS-p Q14677-3;S316-p PQSSVKTSVPSSKSS 0.480726451171932 0.978026621308868 0.098 0.004 5.85650663775183 0.138628106229629 0.098 0.00399999999999999 0.259626689820261 0.968583774076621 1.25895895394765 0.0412358282860485 Q14677 CLINT1 Q14677.3.S316.p_CLINT1 Q14677-3_S316s _1_1_316_316 Q14677-3 P51826-2|Q14677-3 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7517.7517.2 8.52 2.1 1.444 4 1 1 0 622.3409 1163.7036 S316s TMT10 315 (K) TsVPSSK (S) T(0.0)S(0.99)VPS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CLINT1 70350.7 1 21 632.1 256.73 HUMAN 1 5.8565 0.1386 PQTAAARS_______-p Q9UI12;S483-p PQTAAARS_______ 0.386554808133877 0.76875799261096 0.172666666666667 0.0356666666666667 7.64032735319806 1.57966278142078 0.172666666666667 0.0356666666666667 0.172173879255369 0.695078286548159 1.57269747415477 0.413518670281541 Q9UI12 ATP6V1H Q9UI12.S483.p_ATP6V1H Q9UI12_S483s _1_1_483_483 Q9UI12 Q9UI12|Q9UI12-2|G3V126 V-type proton ATPase subunit H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6677.6677.2 15.95 15.95 3.558 3 1 1 0 912.4482 1743.9187 S483s TMT10 470 (K) QLQSEQPQTAAARs (-) QLQS(0.0)EQPQT(0.0)AAARS(0.99) s:Phosphorylated S ATP6V1H 56452.6 2 1 5833.1 15.95 HUMAN 1 7.6403 1.5797 PQTHRILSPSMASKL-p Q9Y6A5;S71-p PQTHRILSPSMASKL 0.195954837597201 0.00488731018917169 -0.258666666666667 -0.617 13.7959168408654 33.7422473767653 -0.258666666666667 -0.617 0.0417261500919565 0.000422449949297424 -2.65552438186388 -7.64246980572022 Q9Y6A5 TACC3 Q9Y6A5.S71.p_TACC3 Q9Y6A5_S71s _1_1_71_71 Q9Y6A5 Q9Y6A5|Q8IX09 Transforming acidic coiled-coil-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19913.19913.2 11.8 5.12 1.527 3 1 1 0 736.4038 1391.8332 S71s TMT10 69 (R) ILsPSMASK (L) ILS(0.99)PS(0.0)MAS(0.0)K K:TMT10,s:Phosphorylated S TACC3 91213.8 7 3 1278.1 159 HUMAN 1 -13.7959 -33.7422 PQTPRARSPAAPRLS-p Q99501;S479-p PQTPRARSPAAPRLS 0.761476943047114 0.321671074184683 0.051 0.111 2.26644238580133 6.5117971857285 0.051 0.111 0.593411230769644 0.223264812320618 0.567031262110312 1.37490137509716 Q99501 GAS2L1 Q99501.S479.p_GAS2L1 Q99501_S479s _1_1_479_479 Q99501 Q99501|A0A5E8 GAS2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3442.3442.3 8.44 8.44 99 1 1 1 0 378.8707 1054.6319 S479s TMT10 477 (R) ARsPAAPR (L) ARS(1.0)PAAPR s:Phosphorylated S GAS2L1 73400.1 1 11 1084.1 179.86 HUMAN 1 2.2664 6.5118 PQTPRPRSRSPSSPE-p Q9UQ35;S1497-p PQTPRPRSRSPSSPE 0.926957514861088 0.00883040673117586 0.018 0.574333333333333 0.650358954277566 29.1121059407075 0.018 0.574333333333333 0.860922592031436 0.00122684417694392 0.183718402495858 6.15708190901382 Q9UQ35 SRRM2 Q9UQ35.S1497.p_SRRM2 Q9UQ35_S1497sS1499s_2_2_1497_1499 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6967.6967.2 10.71 10.71 1.391 4 2 2 0 852.8818 1544.823 S1497s S1499s Hydrogen 1497 (R) sRsPSSPELNNK (C) S(0.99)RS(0.99)PS(0.0)S(0.0)PELNNK K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 9 212 2.1 3310.34 HUMAN 1 0.6504 29.1121 PQTVDHISQEHEGDL-p Q9Y6D6;S258-p PQTVDHISQEHEGDL 0.235639318763897 0.0435575707206903 -0.202333333333333 0.268 12.0218154356487 18.2307736457094 -0.202333333333333 0.268 0.0627795873034216 0.0150287422247165 -2.33620461914182 3.50620393973699 Q9Y6D6 ARFGEF1 Q9Y6D6.S258.p_ARFGEF1 Q9Y6D6_S258s _1_1_258_258 Q9Y6D6 Q9Y6D6 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17115.17115.4 23.41 23.41 3.92 4 1 1 0 914.1978 3573.7862 S258s TMT10 248 (R) YLPPQTVDHIsQEHEGDLDLHTNDVDK (S) Y(0.0)LPPQT(0.0)VDHIS(0.99)QEHEGDLDLHT(0.0)NDVDK K:TMT10,s:Phosphorylated S ARFGEF1 210988.4 2 3 381.1 335.01 HUMAN 1 -12.0218 18.2308 PQVKTLPSPIDAKQQ-p Q2KHR2;S202-p PQVKTLPSPIDAKQQ 0.0198229955984014 0.000952253650599092 -0.920333333333333 -1.38666666666667 39.7452896148337 53.874993646779 -0.920333333333334 -1.38666666666667 0.000106040322166842 4.09732709204195e-06 -10.0403921511172 -18.5483697804362 Q2KHR2 RFX7 Q2KHR2.S202.p_RFX7 Q2KHR2_S202s _1_1_202_202 Q2KHR2 Q2KHR2|Q2KHR2-2|H0YLX2 DNA-binding protein RFX7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18003.18003.2 10.05 10.05 3.532 2 1 1 0 740.4155 1399.8561 S202s TMT10 199 (K) TLPsPIDAK (Q) T(0.0)LPS(0.99)PIDAK K:TMT10,s:Phosphorylated S RFX7 147863 3 1 511.1 287.25 HUMAN 1 -39.7453 -53.875 PQVPQPPSPAAVPRP-p O43734;S383-p PQVPQPPSPAAVPRP 0.334220500930291 0.361290482531187 -0.160666666666667 -0.0956666666666666 8.88413998568896 5.86568693876533 -0.160666666666667 -0.0956666666666666 0.129296271519179 0.259078459548665 -1.78830705650604 -1.26030609295229 O43734 TRAF3IP2 O43734.S383.p_TRAF3IP2 O43734_S383s _1_1_383_383 O43734 O43734 Adapter protein CIKS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19583.19583.4 14.34 14.34 3.642 3 1 1 0 1026.7748 4024.1024 S383s TMT10 361 (R) AGAPGESLECPAELRPQVPQPPsPAAVPRPPSNPPAR (G) AGAPGES(0.0)LECPAELRPQVPQPPS(0.99)PAAVPRPPS(0.0)NPPAR C:Carbamidomethylation,s:Phosphorylated S TRAF3IP2 65121.4 1 1 6063.1 14.34 HUMAN 1 -8.8841 -5.8657 PQVRVGGSSVDLHRF-p O60716-3;S268-p PQVRVGGSSVDLHRF 0.372156248757713 0.562007402958364 0.201333333333333 -0.0566666666666666 7.96300745099924 3.37123069177018 0.201333333333333 -0.0566666666666667 0.15984507322225 0.460126165816301 1.62874271547257 -0.794735799188747 O60716 CTNND1 O60716.3.S268.p_CTNND1 O60716-3_S268sS269s_2_2_268_269 O60716-3 O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-24 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9006.9006.3 8.21 8.21 99 2 2 2 0 472.5478 1255.6956 S268s S269s TMT10 265 (R) VGGssVDLHR (F) VGGS(1.0)S(1.0)VDLHR s:Phosphorylated S CTNND1 105545.3 5 45 21.1 1014.17 HUMAN 1 7.963 -3.3712 PRAALSSSELLELGD-p Q9P2G1;S913-p PRAALSSSELLELGD 0.304068314845154 0.322697662793002 -0.456 -0.639333333333333 9.68717046186354 6.49483540792032 -0.456 -0.639333333333334 0.107468937153947 0.224138498981031 -1.92740881225266 -1.3719115341567 Q9P2G1 ANKIB1 Q9P2G1.S913.p_ANKIB1 Q9P2G1_S913s _1_1_913_913 Q9P2G1 Q9P2G1 Ankyrin repeat and IBR domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36419.36419.3 16.51 16.51 1.157 4 1 1 0 701.0194 2021.0786 S913s TMT10 908 (R) AALSSsELLELGDSLMR (L) AALS(0.0)S(0.0)S(0.99)ELLELGDS(0.0)LMR s:Phosphorylated S ANKIB1 124110.4 1 11 1291.1 157.55 HUMAN 1 -9.6872 -6.4948 PRACVHPSPLRRDPF-p Q86Y97;S290-p PRACVHPSPLRRDPF 0.459669547884547 0.0229065998945267 0.109333333333333 -0.674 6.22503777182274 22.3887614791624 0.109333333333333 -0.674 0.238504305197909 0.00576930969086002 1.32455485008982 -4.40663342139511 Q86Y97 SUV420H2 Q86Y97.S290.p_SUV420H2 Q86Y97_S290s _1_1_290_290 Q86Y97 Q86Y97|A0A0D9SF94 Histone-lysine N-methyltransferase KMT5C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.4901.4901.3 9.79 9.79 99 1 1 1 0 501.2598 1421.7997 S290s TMT10 285 (R) ACVHPsPLRR (D) ACVHPS(1.0)PLRR C:Carbamidomethylation,s:Phosphorylated S KMT5C 53024.9 1 1 4390.1 32.15 HUMAN 1 6.225 -22.3888 PRAEHLESPQLGGKV-p Q9NYD6;S189-p PRAEHLESPQLGGKV 0.72028620456719 0.00882839496282079 -0.0593333333333333 0.464333333333333 2.69026851160172 29.1175810486646 -0.0593333333333334 0.464333333333333 0.538236503895539 0.00122529848104404 -0.656768271373271 6.15868823135454 Q9NYD6 HOXC10 Q9NYD6.S189.p_HOXC10 Q9NYD6_S189s _1_1_189_189 Q9NYD6 Q9NYD6 Homeobox protein Hox-C10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11179.11179.2 15.05 15.05 99 1 1 1 0 902.4746 1723.9743 S189s TMT10 184 (R) AEHLEsPQLGGK (V) AEHLES(1.0)PQLGGK K:TMT10,s:Phosphorylated S HOXC10 38585.3 4 4 634.1 256.49 HUMAN 1 -2.6903 29.1176 PRAEPWLSQPASGSA-p Q8NC56;S90-p PRAEPWLSQPASGSA 0.459105660204422 0.520159264742113 0.156666666666667 0.0806666666666667 6.23533536339213 3.81390254138095 0.156666666666667 0.0806666666666667 0.237939455636071 0.415537043848113 1.32638033261616 0.8812412535873 Q8NC56 LEMD2 Q8NC56.S90.p_LEMD2 Q8NC56_S90s _1_1_90_90 Q8NC56 Q8NC56 LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24985.24985.4 22.25 22.25 3.565 9 1 1 0 943.9555 3692.8295 S90s TMT10 85 (R) AEPWLsQPASGSAYATPGAYGDIRPSAASWVGSR (G) AEPWLS(0.99)QPAS(0.0)GS(0.0)AY(0.0)AT(0.0)PGAY(0.0)GDIRPS(0.0)AAS(0.0)WVGS(0.0)R s:Phosphorylated S LEMD2 57373.5 1 3 664.1 250.64 HUMAN 1 6.2353 3.8139 PRAESGDSLGSEDRD-p Q9NQW6;S661-p PRAESGDSLGSEDRD 0.77431577737001 0.00951798723429863 0.0443333333333333 -0.418 2.12624920346141 28.5215870261073 0.0443333333333333 -0.418783893960595 0.61287947830788 0.00140553381130158 0.536582794938793 -5.98574561489867 Q9NQW6 ANLN Q9NQW6.S661.p_ANLN Q9NQW6_S661s _1_1_661_661 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25219.25219.3 15.94 12.54 1.217 6 1 1 0 914.4219 2661.2841 S661s TMT10 656 (R) AESGDsLGSEDRDLLYSIDAYR (S) AES(0.0)GDS(0.99)LGS(0.0)EDRDLLY(0.0)S(0.0)IDAY(0.0)R s:Phosphorylated S ANLN 125566 3 44 68.1 675.08 HUMAN 1 2.1262 -28.5216 PRAFSSRSYTSGPGS-p P05787;S24-p PRAFSSRSYTSGPGS 0.209461411369469 0.965837733016231 0.271333333333333 0.00600000000000002 13.105184774569 0.216149237241651 0.271333333333333 0.00600000000000003 0.0489194451465218 0.951448041043206 2.53003804641574 0.0637573170719982 P05787 KRT8 P05787.S24.p_KRT8 P05787_S24s _1_1_24_24 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7732.7934.3 17.2 17.2 2.27 7 1 1 0 590.2791 1688.8554 S24s TMT10 19 (R) AFSSRsYTSGPGSR (I) AFS(0.0)S(0.0)RS(0.99)Y(0.0)T(0.0)S(0.0)GPGS(0.0)R s:Phosphorylated S KRT8 53703.3 31 8 69.1 672.47 HUMAN 1 13.1052 0.2161 PRAGSPFSPPPSSSS-p Q96JY6-5;S387-p PRAGSPFSPPPSSSS 0.844490429219358 0.291338980704966 0.028 0.136 1.41961759755409 7.06929332874028 0.028 0.136 0.721170976513832 0.196367977506248 0.376057966173639 1.47272634923969 Q96JY6 PDLIM2 Q96JY6.5.S387.p_PDLIM2 Q96JY6-5_S387s _1_1_387_387 Q96JY6-5 Q96JY6-5|Q96JY6-3|Q96JY6-4|Q96JY6-2 Isoform 5 of PDZ and LIM domain protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18998.19201.3 20.75 19.02 1.13 8 1 1 0 804.726 2332.1982 S387s TMT10 382 (R) AGSPFsPPPSSSSLTGEAAISR (S) AGS(0.0)PFS(0.99)PPPS(0.0)S(0.0)S(0.0)S(0.0)LT(0.0)GEAAIS(0.0)R s:Phosphorylated S PDLIM2 63315 4 7 1306.1 155.86 HUMAN 1 1.4196 7.0693 PRALIHGSIGDILPK-p O94972;S817-p PRALIHGSIGDILPK 0.255264993053251 0.945104089388202 -0.284333333333333 -0.0073333333333333 11.2772720941266 0.353725657535205 -0.284333333333333 -0.0073333333333333 0.074519990453346 0.921780325394394 -2.20475816566536 -0.102848162247955 O94972 TRIM37 O94972.S817.p_TRIM37 O94972_S817s _1_1_817_817 O94972 O94972|O94972-3|O94972-2 E3 ubiquitin-protein ligase TRIM37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25250.25250.3 16.5 13.26 99 1 1 1 0 624.6978 1792.1097 S817s TMT10 812 (R) ALIHGsIGDILPK (T) ALIHGS(1.0)IGDILPK K:TMT10,s:Phosphorylated S TRIM37 109558.4 1 4 3309.1 54.28 HUMAN 1 -11.2773 -0.3537 PRAPAKESPPKRVPD-p A0A0J9YWL0;S540-p PRAPAKESPPKRVPD 0.988589863314434 0.100009719536636 0.00233333333333333 -0.175 0.101650100482529 13.2173630927835 0.00233333333333333 -0.175 0.97686599051797 0.0476720349399736 0.0303629896084978 -2.54888283824543 A0A0J9YWL0 NotFound A0A0J9YWL0.S540.p_NotFound A0A0J9YWL0_S540s _1_1_540_540 A0A0J9YWL0 A0A0J9YWL0|Q9Y4K1 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11272.11272.4 12.98 8.87 3.851 3 1 1 0 750.1883 2917.7645 S540s TMT10 535 (R) APAKEsPPKRVPDPSPVTK (G) APAKES(0.99)PPKRVPDPS(0.0)PVT(0.0)K K:TMT10,s:Phosphorylated S CRYBG1 233643.7 10 17 79.1 640.71 HUMAN 1 0.1017 -13.2174 PRAPDPAYIYDEFLQ-p Q14687;Y724-p PRAPDPAYIYDEFLQ 0.360655253981307 0.0693312315998734 -0.195 -0.214 8.23437153456008 15.411910989017 -0.195 -0.214 0.150162969013688 0.0287613257613841 -1.67579520057024 -2.95407542756383 Q14687 GSE1 Q14687.Y724.p_GSE1 Q14687_Y724y _1_1_724_724 Q14687 Q14687|Q14687-3|Q14687-2 Genetic suppressor element 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.32833.32833.3 17.26 17.26 5.591 2 1 1 0 712.3407 2055.0385 Y724y TMT10 719 (R) APDPAyIYDEFLQQR (R) APDPAY(0.99)IY(0.0)DEFLQQR y:Phosphorylated Y GSE1 136446.7 1 6 221.1 428.09 HUMAN 1 -8.2344 -15.4119 PRAPESDTGDEDQDQ-p Q9H4G0;T580-p PRAPESDTGDEDQDQ 0.825130077485234 0.118077884020604 0.0356666666666667 0.17 1.60920219175637 12.234602471878 0.0356666666666667 0.17 0.690366614014464 0.0597777759313097 0.420405819541818 2.37280568777399 Q9H4G0 EPB41L1 Q9H4G0.T580.p_EPB41L1 Q9H4G0_S578sT580t_2_2_578_580 Q9H4G0 Q9H4G0|A0A0C4DH22|Q9H4G0-2|Q9H4G0-3 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19740.19740.3 15 15 9.567 3 2 2 0 1005.111 2853.379 S578s T580t TMT10 575 (R) APEsDtGDEDQDQERDTVFLK (D) APES(0.99)DT(0.99)GDEDQDQERDT(0.0)VFLK K:TMT10,s:Phosphorylated S,t:Phosphorylated T EPB41L1 99071.6 4 29 174.1 483.37 HUMAN 1 1.6092 12.2346 PRAPGPLSKQGSGSS-p Q13263;S433-p PRAPGPLSKQGSGSS 0.276181983641786 0.10974653563739 0.170333333333333 0.251333333333333 10.5701311721621 12.6736013300628 0.170333333333333 0.251333333333333 0.0876974333043639 0.0540306095380719 2.08095965799041 2.4511099555054 Q13263 TRIM28 Q13263.S433.p_TRIM28 Q13263_S433s _1_1_433_433 Q13263 Q13263|Q13263-2 Transcription intermediary factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16961.16961.4 10.32 10.32 10.318 4 1 1 0 802.6833 3127.745 S433s TMT10 408 (K) IVAERPGTNSTGPAPMAPPRAPGPLsK (Q) IVAERPGT(0.0)NS(0.0)T(0.0)GPAPMAPPRAPGPLS(0.99)K K:TMT10,s:Phosphorylated S TRIM28 90316.8 1 10 118.1 555.36 HUMAN 1 10.5701 12.6736 PRAPVAPTPPTLIKS-p O14686-3;T1195-p PRAPVAPTPPTLIKS 0.25414491835742 0.0916782500803288 0.197333333333333 0.187 11.3263527849487 13.7256636186927 0.197333333333333 0.187 0.0736825625593397 0.0424066180014122 2.21338545968148 2.64113970439575 O14686 KMT2D O14686.3.T1195.p_KMT2D O14686-3_T1195t _1_1_1195_1195 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18604.18604.4 17.67 17.67 6.818 4 1 1 0 882.4485 3446.799 T1195t TMT10 1174 (K) QTAGQGSPCEEQEEPRAPVAPtPPTLIK (S) QT(0.0)AGQGS(0.0)PCEEQEEPRAPVAPT(0.99)PPT(0.0)LIK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T KMT2D 600227.3 3 8 17.1 1042.08 HUMAN 1 11.3264 13.7257 PRAQSPGSPLHARGQ-p Q13796;S1039-p PRAQSPGSPLHARGQ 0.271908041557881 0.0513969127984763 -0.216 -0.245666666666667 10.7142856406567 17.2079920989642 -0.216 -0.245666666666667 0.084834291262662 0.0190195742063362 -2.10612658049738 -3.30115951972237 Q13796 SHROOM2 Q13796.S1039.p_SHROOM2 Q13796_S1039s _1_1_1039_1039 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4992.4992.3 17.61 17.61 3.671 2 1 1 0 477.2438 1349.7487 S1039s TMT10 1034 (R) AQSPGsPLHAR (G) AQS(0.0)PGS(0.99)PLHAR s:Phosphorylated S SHROOM2 177605.1 1 21 90.1 622.62 HUMAN 1 -10.7143 -17.208 PRARKSMSLDMGQPS-p P21359;S2523-p PRARKSMSLDMGQPS 0.398192276272941 0.00719792492613561 -0.116333333333333 0.585666666666667 7.38121571111562 30.6623051878374 -0.116333333333333 0.585666666666667 0.182758855163555 0.000858557687465046 -1.52759171236938 6.62538172734995 P21359 NF1 P21359.S2523.p_NF1 P21359_S2523s _1_1_2523_2523 P21359 P21359|P21359-6|P21359-2 Neurofibromin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15415.15415.3 17.71 17.71 2.279 4 1 1 0 830.7623 2410.3037 S2523s TMT10 2521 (K) SMsLDMGQPSQANTKK (L) S(0.0)MS(0.99)LDMGQPS(0.0)QANT(0.0)KK K:TMT10,s:Phosphorylated S NF1 322961 4 11 437.1 312.53 HUMAN 1 -7.3812 30.6623 PRARRAESPAKDELA-p S4R3C3;S121-p PRARRAESPAKDELA 0.376673189051227 0.288736773296094 -0.203 0.141333333333333 7.84132527671833 7.11738496167342 -0.203 0.141333333333333 0.164387000947456 0.194205490449518 -1.60762221001245 1.48112948737 S4R3C3 NotFound S4R3C3.S121.p_NotFound S4R3C3_T110tS121s_2_2_110_121 S4R3C3 S4R3C3 HCG1997303, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33055.33055.5 7.9 2.11 1.646 5 2 2 0 708.5515 3378.8258 T110t S121s TMT10 100 (R) RLPWSTGYAEtLFCPRARRAEsPAK (D) RLPWS(0.0)T(0.0)GY(0.0)AET(0.99)LFCPRARRAES(0.99)PAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S PPM1J 15659.3 1 7 2032.2 101.56 HUMAN 1 -7.8413 7.1174 PRARRSASPHDVDLC-p Q66K74;S731-p PRARRSASPHDVDLC 0.289563930898932 0.106160016622062 -0.216166666666667 -0.174 10.1476279403158 12.8699736092609 -0.216166666666667 -0.174 0.096657866747305 0.0516419507384947 -2.00737055153044 -2.48631519330107 Q66K74 MAP1S Q66K74.S731.p_MAP1S Q66K74_S729sS731s_2_2_729_731 Q66K74 Q66K74|Q66K74-2 Microtubule-associated protein 1S HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19844.19844.5 17.77 15.03 17.772 3 2 2 0 621.0851 2941.4701 S729s S731s TMT10 729 (R) sAsPHDVDLCLVSPCEFEHRK (A) S(0.99)AS(0.99)PHDVDLCLVS(0.0)PCEFEHRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP1S 113179.3 7 18 456.1 307.14 HUMAN 2 -10.1476 -12.87 PRASPAHSPRENGID-p Q04724;S267-p PRASPAHSPRENGID 0.836331942880676 0.505417173352931 -0.0316666666666667 0.130333333333333 1.50081634452085 3.97190722863882 -0.0316666666666667 0.130333333333333 0.707812724128249 0.400690713403527 -0.395178997508742 0.911602228003419 Q04724 TLE1 Q04724.S267.p_TLE1 Q04724_S267s _1_1_267_267 Q04724 Q04724 Transducin-like enhancer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5033.5033.3 9.42 6.3 2.282 2 1 1 0 673.0157 1937.0605 S267s TMT10 262 (R) ASPAHsPRENGIDK (N) AS(0.0)PAHS(0.99)PRENGIDK K:TMT10,s:Phosphorylated S TLE1 84112.2 1 1 3332.1 53.66 HUMAN 1 -1.5008 3.9719 PRASRVPSSDEEVVE-p Q9C0C2;S1620-p PRASRVPSSDEEVVE 0.914881981405544 0.0821696730450952 0.0163333333333333 0.202 0.756815460618432 14.3830767629677 0.0163333333333333 0.202 0.840075760805432 0.0364495628194128 0.211714114532818 2.76181546186994 Q9C0C2 TNKS1BP1 Q9C0C2.S1620.p_TNKS1BP1 Q9C0C2_S1620s _1_1_1620_1620 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5897.6108.3 18.95 19.15 1.726 3 1 1 0 641.6215 1842.8828 S1620s Hydrogen 1618 (R) VPsSDEEVVEEPQSRR (T) VPS(0.99)S(0.0)DEEVVEEPQS(0.0)RR s:Phosphorylated S TNKS1BP1 182819.3 13 66 4.1 2105.7 HUMAN 1 0.7568 14.3831 PRAVSVGSQPSVFTE-p Q16825;S673-p PRAVSVGSQPSVFTE 0.958290495818535 0.0591148794902953 0.009 0.280333333333333 0.359064206726087 16.3637376374726 0.00900000000000001 0.280333333333333 0.920647926408886 0.0231007583042124 0.104353101433246 3.13606833334548 Q16825 PTPN21 Q16825.S673.p_PTPN21 Q16825_S673s _1_1_673_673 Q16825 Q16825 Tyrosine-protein phosphatase non-receptor type 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17494.17494.2 16.99 16.99 1.351 4 1 1 0 886.9431 1692.9118 S673s TMT10 668 (R) AVSVGsQPSVFTER (T) AVS(0.0)VGS(0.99)QPS(0.0)VFT(0.0)ER s:Phosphorylated S PTPN21 134191.5 2 10 762.1 229.75 HUMAN 1 0.3591 16.3637 PRAVTAYSPEDEKKG-p O60268;S279-p PRAVTAYSPEDEKKG 0.997696533774049 0.0138752131194156 -0.000666666666666677 -0.466666666666667 0.0186983643729061 25.7907548433967 -0.000666666666666675 -0.466666666666667 0.995703797687949 0.0026358732072186 -0.00563770074975874 -5.2400676269371 O60268 KIAA0513 O60268.S279.p_KIAA0513 O60268_S279s _1_1_279_279 O60268 O60268|O60268-3|O60268-2 Uncharacterized protein KIAA0513 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10484.10484.4 13.35 13.35 2.18 3 1 1 0 662.864 2568.4691 S279s TMT10 274 (R) AVTAYsPEDEKKGEK (I) AVT(0.0)AY(0.0)S(0.99)PEDEKKGEK K:TMT10,s:Phosphorylated S KIAA0513 47094.2 3 1 4813.1 26.33 HUMAN 1 -0.0187 -25.7908 PRDAHDVSPTSTDTE-p Q8IVF2;S294-p PRDAHDVSPTSTDTE 0.144672766468409 0.441758446756907 0.259 0.101 17.1403341199985 4.72447939666364 0.259 0.101 0.0193181968873636 0.33693960339913 3.29032610941006 1.05311372110977 Q8IVF2 AHNAK2 Q8IVF2.S294.p_AHNAK2 Q8IVF2_S294s _1_1_294_294 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10283.10283.2 23.23 23.23 2.413 6 1 1 0 1126.4896 2172.0051 S294s Hydrogen 289 (R) DAHDVsPTSTDTEAQLTVER (Q) DAHDVS(0.99)PT(0.0)S(0.0)T(0.0)DT(0.0)EAQLT(0.0)VER s:Phosphorylated S AHNAK2 617759.6 7 4 237.1 418.35 HUMAN 1 17.1403 4.7245 PRDALDLSDINSEPP-p Q99640;S469-p PRDALDLSDINSEPP 0.834327857608735 0.00657538228744706 0.0333333333333333 -0.616 1.51799858750119 31.3695454490953 0.0333333333333333 -0.616 0.705017896153876 0.000729533862346908 0.399200398133775 -6.84836511735886 Q99640 PKMYT1 Q99640.S469.p_PKMYT1 Q99640_S469s _1_1_469_469 Q99640 Q99640|Q99640-3|Q99640-4 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25886.25886.3 16.78 11.43 2.515 4 1 1 0 952.455 2775.3787 S469s TMT10 464 (R) DALDLsDINSEPPRGSFPSFEPR (N) DALDLS(0.99)DINS(0.0)EPPRGS(0.0)FPS(0.0)FEPR s:Phosphorylated S PKMYT1 55090.9 2 11 926.1 199.78 HUMAN 1 1.518 -31.3695 PRDARSFTPGRRNTA-p Q9H7P9;T460-p PRDARSFTPGRRNTA 0.391198751974399 0.00455061128120994 0.21 -1.64333333333333 7.52222962526872 34.3352036196062 0.21 -1.64333333333333 0.176920043497524 0.000368535762594011 1.55215200970441 -7.85265762225283 Q9H7P9 PLEKHG2 Q9H7P9.T460.p_PLEKHG2 Q9H7P9_T460t _1_1_460_460 Q9H7P9 Q9H7P9|Q9H7P9-3|E7ESZ3 Pleckstrin homology domain-containing family G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4982.4982.3 7.65 7.65 3.283 2 1 1 0 377.1955 1049.6053 T460t TMT10 458 (R) SFtPGRR (N) S(0.0)FT(0.99)PGRR t:Phosphorylated T PLEKHG2 149335.7 1 5 886.1 206.23 HUMAN 1 7.5222 -34.3352 PRDFVTISPVQPEER-p Q9H611-3;S151-p PRDFVTISPVQPEER 0.492235246826051 0.00653824583586406 0.100666666666667 -0.516333333333333 5.66860448416258 31.4104638084061 0.100666666666667 -0.516333333333333 0.271106263606425 0.000722692618921092 1.22529528147919 -6.86145181983321 Q9H611 PIF1 Q9H611.3.S151.p_PIF1 Q9H611-3_S151s _1_1_151_151 Q9H611-3 Q9H611-3|Q9H611-4|Q9H611-2 Isoform 3 of ATP-dependent DNA helicase PIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20408.20408.3 12.1 12.1 1.585 2 1 1 0 609.3031 1745.9271 S151s TMT10 146 (R) DFVTIsPVQPEER (R) DFVT(0.0)IS(0.99)PVQPEER s:Phosphorylated S PIF1 78093.6 2 1 5950.1 15.08 HUMAN 1 5.6686 -31.4105 PRDGGRSSPGGQDEG-p A0A1B0GTU4;S793-p PRDGGRSSPGGQDEG 0.890046614604404 0.495360939919901 -0.0206666666666667 0.0646666666666667 0.988166930220848 4.07975605696397 -0.0206666666666667 0.0646666666666667 0.796495464216553 0.390862849926394 -0.270907587002033 0.932184450403173 A0A1B0GTU4 NotFound A0A1B0GTU4.S793.p_NotFound A0A1B0GTU4_S793s _1_1_793_793 A0A1B0GTU4 A0A1B0GTU4|P49023|F5GZ78 Paxillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13882.13882.2 15.52 10.55 1.173 2 1 1 0 1045.9843 2010.9955 S793s TMT10 792 (R) SsPGGQDEGGFMAQGK (T) S(0.0)S(0.99)PGGQDEGGFMAQGK K:TMT10,s:Phosphorylated S PXN 117843.4 15 16 288.1 382.57 HUMAN 1 -0.9882 4.0798 PRDGHPLSPERDHLE-p Q8TEW8;S990-p PRDGHPLSPERDHLE 0.813159451584007 0.016864644809907 -0.0416666666666667 -0.387666666666667 1.72460049706765 24.4684191356439 -0.0416666666666667 -0.387666666666667 0.672264147140107 0.0035740291180631 -0.446910603268746 -4.90443900155794 Q8TEW8 PARD3B Q8TEW8.S990.p_PARD3B Q8TEW8_S990s _1_1_990_990 Q8TEW8 Q8TEW8 Partitioning defective 3 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13964.13964.4 12.9 12.9 9.559 2 1 1 0 643.8302 2492.3298 S990s TMT10 985 (R) DGHPLsPERDHLEGLYAK (V) DGHPLS(0.99)PERDHLEGLY(0.0)AK K:TMT10,s:Phosphorylated S PARD3B 133176.7 1 44 65.4 692.2 HUMAN 1 -1.7246 -24.4684 PRDNGSRSGDLPYDG-p Q86X29-6;S425-p PRDNGSRSGDLPYDG 0.630558105709775 0.0493282775016635 0.067 0.238333333333333 3.72588466220967 17.4827027678024 0.067 0.238333333333333 0.424044596803112 0.0178537612648037 0.864355623952302 3.35567212684851 Q86X29 LSR Q86X29.6.S425.p_LSR Q86X29-6_S425s _1_1_425_425 Q86X29-6 Q86X29|Q86X29-4|Q86X29-3|S4R3V8|Q86X29-2|Q86X29-5|Q86X29-6 Isoform 6 of Lipolysis-stimulated lipoprotein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7049.7049.2 13.19 9.58 13.189 2 1 1 0 530.211 979.448 S425s Hydrogen 425 (R) sGDLPYDGR (L) S(0.99)GDLPY(0.0)DGR s:Phosphorylated S LSR 54725.6 7 13 206.1 448.79 HUMAN 1 3.7259 17.4827 PREADPESEADRAAV-p O00461;S538-p PREADPESEADRAAV 0.439874855003441 0.140091994801677 -0.236 0.245333333333333 6.57159051843983 11.2487883100267 -0.236 0.245333333333333 0.220211983211818 0.0750103460451277 -1.38579367404572 2.19873633972072 O00461 GOLIM4 O00461.S538.p_GOLIM4 O00461_S538s_1_1_538_538 O00461 O00461|F8W785 Golgi integral membrane protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20012.20012.4 23.48 23.48 6.343 1 1 1 0 1467.1274 5784.5138 S538s N549n Hydrogen 533 (R) EADPEsEADRAAVEDInPADDPNNQGEDEFEEAEQVREENLPDENEEQK (Q) EADPES(1.0)EADRAAVEDIN(0.99)PADDPN(0.0)N(0.0)QGEDEFEEAEQVREEN(0.0)LPDEN(0.0)EEQK K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated GOLIM4 81935.9 3 1 3579.1 47.78 HUMAN 1 -6.5716 11.2488 PREAPDTYLAQGPDR-p Q15653;Y161-p PREAPDTYLAQGPDR 0.789534097325871 0.870622174199802 -0.103333333333333 0.0206666666666667 1.97996750666488 0.847844670088574 -0.103333333333333 0.0206666666666667 0.633874453803485 0.822650816313892 -0.504361116980429 0.235241244874905 Q15653 NFKBIB Q15653.Y161.p_NFKBIB Q15653_T160tY161y_2_2_160_161 Q15653 Q15653 NF-kappa-B inhibitor beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12362.12362.4 8.77 2.96 2.493 7 2 2 0 1202.8403 4647.3956 T160t Y161y N173n TMT10 151 (R) PRRPREAPDtyLAQGPDRTPDTnHTPVALYPDSDLEK (E) PRRPREAPDT(0.99)Y(0.99)LAQGPDRT(0.0)PDT(0.0)N(1.0)HT(0.0)PVALY(0.0)PDS(0.0)DLEK K:TMT10,t:Phosphorylated T,y:Phosphorylated Y,n:Deamidated NFKBIB 38169.8 1 1 6901.1 8.77 HUMAN 1 -1.98 0.8478 PREELRHTPELPLAP-p Q9Y618;T1444-p PREELRHTPELPLAP 0.913820677483679 0.937485179874619 -0.0266666666666667 -0.018 0.764809506845917 0.396853656339442 -0.0266666666666667 -0.018 0.838530858017231 0.912671805435389 -0.213796268933379 -0.114883844978081 Q9Y618 NCOR2 Q9Y618.T1444.p_NCOR2 Q9Y618_T1444t _1_1_1444_1444 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16348.16348.5 17.17 13.57 99 1 1 1 0 507.6909 2454.4597 T1444t TMT10 1439 (R) EELRHtPELPLAPRPLK (E) EELRHT(1.0)PELPLAPRPLK K:TMT10,t:Phosphorylated T NCOR2 275540.8 2 22 16.1 1053.89 HUMAN 1 -0.7648 -0.3969 PREEVRKSFVESVEE-p Q7RTP6;S1512-p PREEVRKSFVESVEE 0.116302905463927 0.597862038009916 -0.300666666666667 0.051 19.4487134319282 3.02475452634229 -0.300666666666667 0.051 0.0113534710477019 0.498338622468709 -3.76162446730174 0.72533346548768 Q7RTP6 MICAL3 Q7RTP6.S1512.p_MICAL3 Q7RTP6_S1512s _1_1_1512_1512 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.32385.32385.4 18.58 18.58 2.627 7 1 1 0 1084.2637 4254.0592 S1512s TMT10 1512 (K) sFVESVEEIPFADDVEDTYDDKTEDSSLQEK (F) S(0.99)FVES(0.0)VEEIPFADDVEDT(0.0)Y(0.0)DDKT(0.0)EDS(0.0)S(0.0)LQEK K:TMT10,s:Phosphorylated S MICAL3 225431.9 1 16 190.1 466.81 HUMAN 1 -19.4487 3.0248 PREREEYSD______-p A6NEL2;S792-p PREREEYSD______ 0.491254403752362 0.76713806264453 0.130333333333333 0.037 5.6848419512663 1.59027186111195 0.130333333333333 0.037 0.270094539951889 0.693382400074684 1.22821065545534 0.415978621322586 A6NEL2 SOWAHB A6NEL2.S792.p_SOWAHB A6NEL2_S792s _1_1_792_792 A6NEL2 A6NEL2 Ankyrin repeat domain-containing protein SOWAHB HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3514.3514.2 9.1 9.1 5.718 2 1 1 0 618.7535 1156.532 S792s TMT10 787 (R) EREEYsD (-) EREEY(0.0)S(0.99)D s:Phosphorylated S SOWAHB 86311.4 1 10 711.1 238.55 HUMAN 1 5.6848 1.5903 PRERLQLSFQDDDSI-p Q8TEP8-3;S92-p PRERLQLSFQDDDSI 0.63822938487464 0.268073824272307 -0.0716666666666667 0.112333333333333 3.63816498665452 7.53000372632687 -0.0716666666666666 0.112333333333333 0.432696618609371 0.176603630539374 -0.8473001368175 1.5530429648932 Q8TEP8 NotFound Q8TEP8.3.S92.p_NotFound Q8TEP8-3_S92s _1_1_92_92 Q8TEP8-3 Q8TEP8-3 Isoform 3 of Centrosomal protein of 192 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22159.22159.2 10.8 10.8 4.765 3 1 1 0 916.9373 1752.8966 S92s TMT10 89 (R) LQLsFQDDDSISR (K) LQLS(0.99)FQDDDS(0.0)IS(0.0)R s:Phosphorylated S CEP192 281787.5 1 2 491.1 293.99 HUMAN 1 -3.6382 7.53 PRFFRLNSNNALIEF-p Q96JB2;S663-p PRFFRLNSNNALIEF 0.53995702217542 0.0091624481512753 -0.154333333333333 0.442 4.94128502066183 28.8229199153563 -0.154333333333333 0.442 0.32053207716189 0.00131131795714494 -1.09328720098505 6.07270437117785 Q96JB2 COG3 Q96JB2.S663.p_COG3 Q96JB2_S663s _1_1_663_663 Q96JB2 Q96JB2 Conserved oligomeric Golgi complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34072.34072.5 28.73 25.26 28.731 4 1 1 0 783.0254 3831.126 S663s TMT10 661 (R) LNsNNALIEFLLEGTPEIREHYLDSKK (D) LNS(0.99)NNALIEFLLEGT(0.0)PEIREHY(0.0)LDS(0.0)KK K:TMT10,s:Phosphorylated S COG3 95064.1 6 3 1863.1 110.57 HUMAN 1 -4.9413 28.8229 PRFSYVNSFTKRTVA-p Q6ZU80;S1061-p PRFSYVNSFTKRTVA 0.129968376443991 0.00407646439511626 -0.357 -0.721 18.3350242776787 35.1954434427742 -0.357 -0.721 0.0146722788487246 0.000302312187444221 -3.5303878781697 -8.16644218879894 Q6ZU80 CEP128 Q6ZU80.S1061.p_CEP128 Q6ZU80_S1061s _1_1_1061_1061 Q6ZU80 Q6ZU80 Centrosomal protein of 128 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21801.21801.3 11.92 11.92 3.113 4 1 1 0 544.2816 1550.8619 S1061s TMT10 1056 (R) FSYVNsFTK (R) FS(0.0)Y(0.0)VNS(0.99)FT(0.0)K K:TMT10,s:Phosphorylated S CEP128 128640.5 2 14 1261.1 161 HUMAN 1 -18.335 -35.1954 PRGDRNGSPGGTGMR-p Q9Y3M8;S171-p PRGDRNGSPGGTGMR 0.145152146047681 0.00888933969691268 0.257333333333333 0.426666666666667 17.0838514757021 29.0567055781856 0.257333333333333 0.426666666666667 0.0195710827144955 0.0012425945434447 3.27916835474588 6.14084669847564 Q9Y3M8 STARD13 Q9Y3M8.S171.p_STARD13 Q9Y3M8_S171s _1_1_171_171 Q9Y3M8 Q9Y3M8|Q9Y3M8-2|Q9Y3M8-4|Q9Y3M8-3|Q9Y3M8-5 StAR-related lipid transfer protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4541.4541.2 11.96 5.23 2.369 2 1 1 0 621.7789 1162.5836 S171s TMT10 169 (R) NGsPGGTGMR (N) NGS(0.99)PGGT(0.0)GMR s:Phosphorylated S STARD13 126277.4 5 3 564.1 271.22 HUMAN 1 17.0839 29.0567 PRGDTSHSPTPGKVS-p Q9P2B4;S549-p PRGDTSHSPTPGKVS 0.239517058977934 0.641068710006017 0.232333333333333 0.0866666666666667 11.8647378121922 2.63031633707948 0.232333333333333 0.0866666666666667 0.0650917906202101 0.545718109916063 2.30836560615196 0.644186163340908 Q9P2B4 CTTNBP2NL Q9P2B4.S549.p_CTTNBP2NL Q9P2B4_S549s _1_1_549_549 Q9P2B4 Q9P2B4 CTTNBP2 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4455.4455.2 10.2 10.2 1.55 4 1 1 0 811.4028 1541.8324 S549s TMT10 544 (R) GDTSHsPTPGK (V) GDT(0.0)S(0.0)HS(0.99)PT(0.0)PGK K:TMT10,s:Phosphorylated S CTTNBP2NL 70613.2 1 5 1031.1 186 HUMAN 1 11.8647 2.6303 PRGFSCGSAIVGGGK-p P19013;S19-p PRGFSCGSAIVGGGK 0.617306864410826 0.00390579112306504 0.109 0.668333333333333 3.88899432797987 35.5450939986818 0.109 0.668333333333333 0.408413949571967 0.000278927028473079 0.895850434626059 8.29706194291843 P19013 NotFound P19013.S19.p_NotFound P19013_S19s _1_1_19_19 P19013 P19013|F8VZR6|F8VX05 Keratin, type II cytoskeletal 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17274.17274.2 16.27 16.27 3.443 2 1 1 0 867.9363 1654.8987 S19s TMT10 14 (R) GFSCGsAIVGGGK (R) GFS(0.0)CGS(0.99)AIVGGGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KRT4 57683.6 4 45 69.99 672.47 HUMAN 1 3.889 35.5451 PRGGQRVSDNIKKET-p O60524;S936-p PRGGQRVSDNIKKET 0.016158495038515 0.00381051999269482 -0.923 -1.17733333333333 42.1321158917341 35.8517249925917 -0.923 -1.17733333333333 6.12052126006097e-05 0.000259912699988631 -11.160815340677 -8.41311025969466 O60524 NEMF O60524.S936.p_NEMF O60524_S936s _1_1_936_936 O60524 O60524|O60524-3|O60524-5|O60524-4|O60524-2 Nuclear export mediator factor NEMF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6862.6862.4 7.81 7.81 99 1 1 1 0 493.0361 1889.1536 S936s TMT10 931 (R) GGQRVsDNIKK (E) GGQRVS(1.0)DNIKK K:TMT10,s:Phosphorylated S NEMF 123408.6 1 5 1429.1 143.12 HUMAN 1 -42.1321 -35.8517 PRGGSLESDGCPKEP-p P51608-2;S438-p PRGGSLESDGCPKEP 0.53873022349793 0.520314320438879 0.0956666666666667 0.120333333333333 4.96488438161079 3.81123453055791 0.0956666666666667 0.120333333333333 0.318795044455895 0.415792400061066 1.09761902337212 0.880726399065815 P51608 MECP2 P51608.2.S438.p_MECP2 P51608-2_S438s _1_1_438_438 P51608-2 P51608-2 Isoform B of Methyl-CpG-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9944.9944.4 8.06 8.06 8.055 2 1 1 0 575.546 2219.1945 S438s TMT10 433 (R) GGSLEsDGCPKEPAK (T) GGS(0.0)LES(0.99)DGCPKEPAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MECP2 53493.6 1 7 1786.1 114.94 HUMAN 1 4.9649 3.8112 PRGISSPSPINAFLS-p Q8NDV7;S1944-p PRGISSPSPINAFLS 0.796323249979386 0.341120434413603 0.047 0.117333333333333 1.90718485599663 6.18709506006069 0.047 0.117333333333333 0.644586958391748 0.240597158535176 0.488147921116965 1.3175027176299 Q8NDV7 TNRC6A Q8NDV7.S1944.p_TNRC6A Q8NDV7_S1944s _1_1_1944_1944 Q8NDV7 Q8NDV7|Q8NDV7-5|Q8NDV7-6|Q8NDV7-2|Q8NDV7-4 Trinucleotide repeat-containing gene 6A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.34438.34438.3 13.25 13.25 2.221 5 1 1 0 880.0867 2558.2758 S1944s TMT10 1939 (R) GISSPsPINAFLSVDHLGGGGESM (-) GIS(0.0)S(0.0)PS(0.99)PINAFLS(0.0)VDHLGGGGES(0.0)M s:Phosphorylated S TNRC6A 211092.3 4 21 181.1 478.43 HUMAN 1 1.9072 6.1871 PRGMGPGTPAGYGRG-p P23246;T687-p PRGMGPGTPAGYGRG 0.376746768297789 0.0173615564197841 0.158 -0.409333333333333 7.83777101219601 24.2723623881296 0.158 -0.409333333333333 0.164521590278008 0.00373907142426228 1.60700505470962 -4.85598568182958 P23246 SFPQ P23246.T687.p_SFPQ P23246_T687t _1_1_687_687 P23246 P23246 Splicing factor, proline- and glutamine-rich HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8800.8800.2 13.67 13.67 9.856 2 1 1 0 715.3285 1349.6833 T687t TMT10 682 (R) GMGPGtPAGYGR (G) GMGPGT(0.99)PAGY(0.0)GR t:Phosphorylated T SFPQ 76262.2 3 10 1659.1 123.09 HUMAN 1 7.8378 -24.2724 PRGPPASSPAPAPKF-p Q15942;S259-p PRGPPASSPAPAPKF 0.799316811191766 0.103251263587157 0.0406666666666667 -0.205333333333333 1.87435441936464 13.0264448630182 0.0406666666666667 -0.205333333333333 0.649478169613083 0.0498144699640398 0.48079356600807 -2.51445030078769 Q15942 ZYX Q15942.S259.p_ZYX Q15942_S259s _1_1_259_259 Q15942 Q15942|Q15942-2 Zyxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8531.8531.2 10.71 10.71 1.101 2 1 1 0 807.9368 1534.8993 S259s TMT10 254 (R) GPPASsPAPAPK (F) GPPAS(0.0)S(0.99)PAPAPK K:TMT10,s:Phosphorylated S ZYX 62474.4 4 4 1126.1 174.71 HUMAN 1 1.8744 -13.0264 PRGQETESLDPPSVP-p Q71F56;S570-p PRGQETESLDPPSVP 0.602220568124573 0.0241378308738356 0.0793333333333333 0.382 4.06936445505509 22.0410745064184 0.0793333333333333 0.382 0.391799208664602 0.00625018035278227 0.930365663270445 4.32674190862857 Q71F56 MED13L Q71F56.S570.p_MED13L Q71F56_S570s_1_1_570_570 Q71F56 Q71F56 Mediator of RNA polymerase II transcription subunit 13-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32788.32788.4 18.55 15.16 1.659 6 1 1 0 991.4925 3881.9606 S570s N585n TMT10 565 (R) GQETEsLDPPSVPVNPALYGnGLELQQLSTLDDR (T) GQET(0.0)ES(0.99)LDPPS(0.0)VPVN(0.0)PALY(0.0)GN(0.99)GLELQQLS(0.0)T(0.0)LDDR s:Phosphorylated S,n:Deamidated MED13L 245507 1 4 415.1 321.44 HUMAN 1 4.0694 22.0411 PRGSGTASDDEFENL-p Q7Z6Z7;S1907-p PRGSGTASDDEFENL 0.732532980919999 0.774931571067162 -0.0706666666666667 0.111 2.56344965751012 1.53175252573472 -0.0706666666666667 0.111 0.554185341465816 0.702788663560514 -0.630258264119926 0.402370309802615 Q7Z6Z7 HUWE1 Q7Z6Z7.S1907.p_HUWE1 Q7Z6Z7_S1907s _1_1_1907_1907 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13878.14088.2 19.08 19.08 2.588 3 1 1 0 903.8911 1726.8081 S1907s TMT10 1902 (R) GSGTAsDDEFENLR (I) GS(0.0)GT(0.0)AS(0.99)DDEFENLR s:Phosphorylated S HUWE1 485818.9 7 17 11.1 1210.45 HUMAN 1 -2.5634 1.5318 PRHHHHDSDSNSPCC-p Q9BU76;S231-p PRHHHHDSDSNSPCC 0.0581213487126104 0.0326445337907363 0.783666666666667 0.581333333333333 26.9789970117727 20.0551030812307 0.783666666666667 0.581333333333333 0.00200493500677239 0.00987392199388537 5.56309767174355 3.88713592065143 Q9BU76 C1orf35 Q9BU76.S231.p_C1orf35 Q9BU76_S231s _1_1_231_231 Q9BU76 Q9BU76 Multiple myeloma tumor-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3156.3156.4 15.34 15.34 1.102 3 1 1 0 507.4525 1946.8183 S231s Hydrogen 226 (R) HHHHDsDSNSPCCK (R) HHHHDS(0.99)DS(0.0)NS(0.0)PCCK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S MMTAG2 29696.6 3 5 2785.1 70.71 HUMAN 1 26.979 20.0551 PRHIRTHTGEKPYEC-p O95365;T405-p PRHIRTHTGEKPYEC 0.282495710935346 0.00443089596482278 -0.213 -0.838666666666667 10.3797384485437 34.5688436517087 -0.213 -0.838666666666667 0.0916275670657245 0.00034923328961869 -2.04776820163467 -7.9368312343321 O95365 ZBTB7A O95365.T405.p_ZBTB7A O95365_T405t _1_1_405_405 O95365 O95365 Zinc finger and BTB domain-containing protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9522.9522.3 12.54 12.54 2.239 3 1 1 0 835.4125 2424.2619 T405t TMT10 403 (R) THtGEKPYECNICK (V) T(0.0)HT(0.99)GEKPY(0.0)ECNICK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ZBTB7A 62236.8 1 5 749.1 232.5 HUMAN 1 -10.3797 -34.5688 PRHTAAPTDPADGPV-p Q04941;T145-p PRHTAAPTDPADGPV 0.838788690758696 0.336422946850208 -0.0466666666666667 0.123 1.47747834073916 6.26863741249308 -0.0466666666666667 0.123 0.711626587957473 0.236121894320561 -0.389703167206641 1.33195103644472 Q04941 PLP2 Q04941.T145.p_PLP2 Q04941_T145t _1_1_145_145 Q04941 Q04941 Proteolipid protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9841.9841.2 11.86 11.86 4.883 2 1 1 0 779.3538 1477.7484 T145t TMT10 140 (R) HTAAPtDPADGPV (-) HT(0.0)AAPT(0.99)DPADGPV t:Phosphorylated T PLP2 17032.7 1 1 6403.1 11.86 HUMAN 1 -1.4775 6.2686 PRHTPDQSPGMESRH-p Q7Z2K8;S64-p PRHTPDQSPGMESRH 0.323531608690398 0.769710479460065 -0.174 -0.067 9.17548501753297 1.5713507062247 -0.174 -0.067 0.120907014715732 0.696409888870986 -1.83874452936531 -0.411589140491411 Q7Z2K8 GPRIN1 Q7Z2K8.S64.p_GPRIN1 Q7Z2K8_S64s _1_1_64_64 Q7Z2K8 Q7Z2K8|Q7Z2K8-2 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4488.4488.3 13.49 13.49 6.079 3 1 1 0 550.909 1570.7481 S64s TMT10 59 (R) HTPDQsPGMESR (H) HT(0.0)PDQS(0.99)PGMES(0.0)R s:Phosphorylated S GPRIN1 103196.3 1 2 292.1 381.4 HUMAN 1 -9.1755 -1.5714 PRHVSPVTPPREVPI-p Q13443;T761-p PRHVSPVTPPREVPI 0.931581314885231 0.0221209949411289 0.0146666666666667 -0.333333333333333 0.610304029977258 22.6134109071513 0.0146666666666667 -0.333333333333333 0.868899599415465 0.00547846522513039 0.173051956152293 -4.45874273568177 Q13443 ADAM9 Q13443.T761.p_ADAM9 Q13443_T761t _1_1_761_761 Q13443 Q13443 Disintegrin and metalloproteinase domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13955.14161.4 18.07 18.07 1.433 3 1 1 0 561.0492 2161.2079 T761t TMT10 756 (R) HVSPVtPPREVPIYANR (F) HVS(0.0)PVT(0.99)PPREVPIY(0.0)ANR t:Phosphorylated T ADAM9 93064.8 2 4 2476.1 81.85 HUMAN 1 0.6103 -22.6134 PRIAPKASMAGASSS-p E7ETY2;S1073-p PRIAPKASMAGASSS 0.580132943065601 0.567226356215313 0.0863333333333333 0.0553333333333333 4.34836393843373 3.32094408246042 0.0863333333333333 0.0553333333333334 0.367420688085092 0.465484894011809 0.983161025942121 0.784761642016366 E7ETY2 TCOF1 E7ETY2.S1073.p_TCOF1 E7ETY2_S1073s _1_1_1073_1073 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12370.12370.3 13.28 9.23 2.28 4 1 1 0 691.7175 1993.1719 S1073s TMT10 1068 (R) IAPKAsMAGASSSK (E) IAPKAS(0.99)MAGAS(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S TCOF1 152529.5 1 23 19.1 1034.65 HUMAN 1 4.3484 3.3209 PRIFQGYSFVAPSIL-p O75676;S360-p PRIFQGYSFVAPSIL 0.240454252921953 0.0726139314077081 0.277666666666667 0.288 11.8340219578584 15.1367779178633 0.277666666666667 0.288 0.0655537898001771 0.0306423598349561 2.30292888062558 2.90222852248493 O75676 RPS6KA4 O75676.S360.p_RPS6KA4 O75676_S360s _1_1_360_360 O75676 O75676|O75676-2|E9PJN1 Ribosomal protein S6 kinase alpha-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.33859.33859.4 21.48 21.48 6.496 4 1 1 0 1033.0027 4049.0177 S360s TMT10 355 (R) IFQGYsFVAPSILFDHNNAVMTDGLEAPGAGDRPGR (A) IFQGY(0.0)S(0.99)FVAPS(0.0)ILFDHNNAVMT(0.0)DGLEAPGAGDRPGR s:Phosphorylated S RPS6KA4 86174.8 1 2 1564.1 131.32 HUMAN 1 11.834 15.1368 PRIGSPLSPKKNSET-p Q659C4;S343-p PRIGSPLSPKKNSET 0.150283451076775 0.0436164867027132 -0.414666666666667 -0.419333333333333 16.5791132489824 18.2205925249062 -0.414666666666667 -0.419333333333333 0.021983086819556 0.0150640152792799 -3.18019106324454 -3.50413414429619 Q659C4 LARP1B Q659C4.S343.p_LARP1B Q659C4_S340sS343s_2_2_340_343 Q659C4 Q659C4|Q659C4-2|Q659C4-9|D6R9W6|Q659C4-4 La-related protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12098.12098.3 9.75 9.75 99 2 2 2 0 515.6142 1384.8928 S340s S343s Hydrogen 338 (R) IGsPLsPKK (N) IGS(1.0)PLS(1.0)PKK K:TMT10-Lys-Only,s:Phosphorylated S LARP1B 105833.8 5 13 551.1 274.41 HUMAN 1 -16.5791 -18.2206 PRKDRHDTPDPSPRR-p Q9BRD0;T147-p PRKDRHDTPDPSPRR 0.55537981284512 0.0883182235445611 0.091 0.197333333333333 4.71638796256998 13.9503011477751 0.091 0.197333333333333 0.337567947995534 0.0402689110154362 1.05181867683349 2.68219615250648 Q9BRD0 BUD13 Q9BRD0.T147.p_BUD13 Q9BRD0_T147t _1_1_147_147 Q9BRD0 Q9BRD0|Q9BRD0-2 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3784.3784.4 15.67 7.67 5.147 2 1 1 0 401.1878 1521.7607 T147t TMT10 143 (K) DRHDtPDPSPR (R) DRHDT(0.99)PDPS(0.0)PR t:Phosphorylated T BUD13 70576.6 4 6 171.1 490.08 HUMAN 1 4.7164 13.9503 PRKEVLASPDRLWGS-p Q9C0C2;S178-p PRKEVLASPDRLWGS 0.887353114485877 0.00475933382640591 0.0286666666666667 -0.821666666666667 1.01205404608515 33.9569349160614 0.0286666666666667 -0.821666666666667 0.792126596415842 0.000402074479487453 0.276899330849557 -7.71800698999527 Q9C0C2 TNKS1BP1 Q9C0C2.S178.p_TNKS1BP1 Q9C0C2_S178s _1_1_178_178 Q9C0C2 Q9C0C2|E9PKK0 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20998.21204.3 18.63 18.63 7.898 2 1 1 0 598.9748 1714.9438 S178s TMT10 174 (K) EVLAsPDRLWGSR (L) EVLAS(0.99)PDRLWGS(0.0)R s:Phosphorylated S TNKS1BP1 182819.3 16 4 4.1 2105.7 HUMAN 1 1.0121 -33.9569 PRKFTRDTPLGKLTA-p P28749;T340-p PRKFTRDTPLGKLTA 0.529083995391161 0.00172752646433129 -0.115 -1.71766666666667 5.11602820144444 43.7193589866592 -0.115 -1.71766666666667 0.307891131638872 4.2468224189982e-05 -1.12527898477671 -11.9377778936093 P28749 RBL1 P28749.T340.p_RBL1 P28749_T340t _1_1_340_340 P28749 P28749|P28749-2 Retinoblastoma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7513.7513.3 8.31 2.72 2.199 2 1 1 0 567.6554 1620.9837 T340t Hydrogen 335 (R) KFTRDtPLGK (L) KFT(0.0)RDT(0.99)PLGK K:TMT10-Lys-Only,t:Phosphorylated T RBL1 122214.1 3 2 566.1 270.71 HUMAN 1 -5.116 -43.7194 PRKGAAPTPPGKTGP-p E7ETY2;T914-p PRKGAAPTPPGKTGP 0.627581962637461 0.00488459422585612 -0.115333333333333 -0.609 3.76065894547015 33.7509091378372 -0.115333333333333 -0.609 0.420662797300614 0.000421608236103514 -0.871093656128404 -7.64550513836272 E7ETY2 TCOF1 E7ETY2.T914.p_TCOF1 E7ETY2_T914t _1_1_914_914 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2|Q13428-5 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8617.8617.3 14.82 14.82 99 1 1 1 0 564.3329 1611.0197 T914t TMT10 909 (R) KGAAPtPPGK (T) KGAAPT(1.0)PPGK K:TMT10,t:Phosphorylated T TCOF1 152529.5 7 21 19.1 1034.65 HUMAN 1 -3.7607 -33.7509 PRKGVDRSPDPGGPE-p A0A087X263;S153-p PRKGVDRSPDPGGPE 0.171158122502722 0.0463462978252902 0.706333333333333 -0.346333333333333 15.2864252539848 17.8489316806615 0.706333333333334 -0.346333333333333 0.0296044825535026 0.0164099339089254 2.93234509390511 -3.42897871884514 A0A087X263 MAGIX A0A087X263.S153.p_MAGIX A0A087X263_S153s _1_1_153_153 A0A087X263 Q9H6Y5-3|A0A087X1L4|A0A087X263 PDZ domain-containing protein MAGIX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6219.6219.4 12.35 9.82 12.066 3 1 1 0 588.0536 2269.2301 S153s TMT10 148 (R) KGVDRsPDPGGPEVTGSR (S) KGVDRS(0.99)PDPGGPEVT(0.0)GS(0.0)R K:TMT10,s:Phosphorylated S MAGIX 26728.6 2 2 5265.1 21.22 HUMAN 1 15.2864 -17.8489 PRKILAVSPSRRINR-p D6RJB7;S754-p PRKILAVSPSRRINR 0.0450533874683483 0.0256750378275206 -0.562666666666667 -0.318666666666667 29.8512338737406 21.6355430406112 -0.562666666666667 -0.318666666666667 0.0010348481142863 0.00686192071781337 -6.38698853172902 -4.23469847628183 D6RJB7 ANKRD31 D6RJB7.S754.p_ANKRD31 D6RJB7_S754s _1_1_754_754 D6RJB7 D6RJB7|Q8N7Z5 Putative ankyrin repeat domain-containing protein 31 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15505.15505.2 7.59 7.59 2 2 1 1 0 576.3231 1071.6724 S754s TMT10 750 (K) ILAVsPSR (R) ILAVS(0.99)PS(0.0)R s:Phosphorylated S ANKRD31 219728.3 1 2 6264.1 12.73 HUMAN 1 -29.8512 -21.6355 PRKKRLKSIEERQLL-p O15164;S1042-p PRKKRLKSIEERQLL 0.0425646712541339 0.00219928027114295 -0.583333333333333 -0.780333333333333 30.6154455180344 41.2592788797227 -0.583333333333333 -0.780333333333334 0.000867871542714948 7.48293739941942e-05 -6.6215817123968 -10.7125280937374 O15164 TRIM24 O15164.S1042.p_TRIM24 O15164_S1042s _1_1_1042_1042 O15164 O15164|O15164-2 Transcription intermediary factor 1-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11324.11324.2 8.09 1.61 99 1 1 1 0 706.8989 1332.8251 S1042s TMT10 1040 (R) LKsIEER (Q) LKS(1.0)IEER K:TMT10,s:Phosphorylated S TRIM24 118769 2 11 598.1 263.51 HUMAN 1 -30.6154 -41.2593 PRKKSGGSGERNSTP-p P48382;S476-p PRKKSGGSGERNSTP 0.546775061594564 0.183091253201639 -0.122333333333333 0.204333333333333 4.84015956760418 9.7002100652175 -0.122333333333333 0.204333333333333 0.328083238523369 0.10714674778482 -1.07468345042687 1.92891668287761 P48382 RFX5 P48382.S476.p_RFX5 P48382_S476s _1_1_476_476 P48382 P48382|P48382-2 DNA-binding protein RFX5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6385.6385.3 11.38 11.38 2.123 4 1 1 0 609.9825 1747.9703 S476s TMT10 473 (K) SGGsGERNSTPLK (S) S(0.0)GGS(0.99)GERNS(0.0)T(0.0)PLK K:TMT10,s:Phosphorylated S RFX5 65721.2 2 5 1365.1 149.8 HUMAN 1 -4.8402 9.7002 PRKNRMMTYAKELIN-p Q3B820-3;T193-p PRKNRMMTYAKELIN 0.985102205736535 0.24505245873321 0.00366666666666666 0.120666666666667 0.130736716742014 8.04774510487522 0.00366666666666664 0.120666666666667 0.970345348460188 0.156756475225277 0.0389257788845432 1.64291810350896 Q3B820 FAM161A Q3B820.3.T193.p_FAM161A Q3B820-3_T193tT204tY211y_3_3_193_211 Q3B820-3 Q3B820-3|Q3B820-2 Isoform 3 of Protein FAM161A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29981.29981.4 7.39 1.9 1.455 4 3 3 0 1044.4606 3918.9328 T193t M202m T204t Y211y TMT10 191 (R) MMtYAKELINNmWtDFCVEDyIRCK (D) M(0.0)M(0.0)T(0.99)Y(0.0)AKELINNM(0.99)WT(0.99)DFCVEDY(0.99)IRCK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,m:Oxidized methionine,y:Phosphorylated Y FAM161A 84231.8 1 4 4058.1 38.46 HUMAN 1 0.1307 8.0477 PRKQPPVSPGTALVG-p P17096;S36-p PRKQPPVSPGTALVG 0.152472658382578 0.68494588299511 -0.297333333333333 -0.0473333333333333 16.4201987020057 2.25057847444244 -0.297333333333333 -0.0473333333333333 0.0228023774228939 0.59558280741187 -3.14929436834094 -0.563537593009199 P17096 HMGA1 P17096.S36.p_HMGA1 P17096_S36s _1_1_36_36 P17096 P17096-3 High mobility group protein HMG-I/HMG-Y HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15823.15823.3 13.98 13.98 1.198 3 1 1 0 787.789 2281.3847 S36s TMT10 31 (R) KQPPVsPGTALVGSQK (E) KQPPVS(0.99)PGT(0.0)ALVGS(0.0)QK K:TMT10,s:Phosphorylated S HMGA1 11675.8 7 3 1152.1 172.09 HUMAN 1 -16.4202 -2.2506 PRKQRDKSPSSLLED-p P42684-6;S610-p PRKQRDKSPSSLLED 0.883910399642057 0.0450301624566526 -0.0246666666666667 -0.326 1.05808268886185 18.0233291961857 -0.0246666666666667 -0.326 0.783775585452135 0.0157640237456974 -0.28838506530451 -3.46414756091189 P42684 ABL2 P42684.6.S610.p_ABL2 P42684-6_S610s_1_1_610_610 P42684-6 P42684|P42684-3|P42684-6|P42684-2|P42684-5|P42684-10|P42684-7|P42684-4 Isoform 6 of Abelson tyrosine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17311.17311.3 12.95 8.54 1.162 3 1 1 0 699.0316 2032.1439 Q606q S610s Hydrogen 606 (K) qRDKsPSSLLEDAK (E) Q(1.0)RDKS(0.99)PS(0.0)S(0.0)LLEDAK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S ABL2 127186.4 15 5 615.1 261.3 HUMAN 1 -1.0581 -18.0233 PRKRRLASLNAEALN-p Q8TBE0;S121-p PRKRRLASLNAEALN 0.0775649771385732 0.0584042510352364 -0.398 -0.275 23.7295841066707 16.4333946825604 -0.398 -0.275 0.00423683537304169 0.0227331978536578 -4.72904945846301 -3.14955466099748 Q8TBE0 BAHD1 Q8TBE0.S121.p_BAHD1 Q8TBE0_S121s _1_1_121_121 Q8TBE0 Q8TBE0|Q8TBE0-2|Q8TBE0-3 Bromo adjacent homology domain-containing 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.35248.35248.3 20.72 20.72 99 1 1 1 0 688.3744 1983.1436 S121s TMT10 119 (R) LAsLNAEALNNLLLER (E) LAS(1.0)LNAEALNNLLLER s:Phosphorylated S BAHD1 85848.7 2 3 636.1 256.1 HUMAN 1 -23.7296 -16.4334 PRKTKSLSLESTDRG-p Q5VT25-2;S1743-p PRKTKSLSLESTDRG 0.947467592074742 0.133700959631937 0.011 0.155 0.465193405946422 11.5192740246671 0.011 0.155 0.898422581899102 0.0704810876714699 0.133765016412059 2.24627730718655 Q5VT25 CDC42BPA Q5VT25.2.S1743.p_CDC42BPA Q5VT25-2_S1743s _1_1_1743_1743 Q5VT25-2 Q5VT25-6|Q5VT25-2 Isoform 2 of Serine/threonine-protein kinase MRCK alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11890.12610.2 11.56 4.77 1.11 4 1 1 0 658.8189 1236.6633 S1743s TMT10 1741 (K) SLsLESTDR (G) S(0.0)LS(0.99)LES(0.0)T(0.0)DR s:Phosphorylated S CDC42BPA 201918 2 15 917.1 200.65 HUMAN 1 0.4652 11.5193 PRKTRRLSPSASPPR-p A9Z1X7;S384-p PRKTRRLSPSASPPR 0.209822321639883 0.777315683948851 0.194 0.0333333333333333 13.0920191165839 1.51422867470409 0.194 0.0333333333333334 0.0490679696910845 0.705630155810741 2.52766157351061 0.398276362816622 A9Z1X7 NotFound A9Z1X7.S384.p_NotFound A9Z1X7_S384s _1_1_384_384 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5942.5942.2 8.24 8.24 1.511 3 1 1 0 688.8636 1296.7586 S384s TMT10 382 (R) RLsPSASPPR (R) RLS(0.99)PS(0.0)AS(0.0)PPR s:Phosphorylated S SRRM1 103445.7 3 7 8.1 1346.57 HUMAN 1 13.092 1.5142 PRKVPPPSPKSSGPK-p Q96QE3;S1222-p PRKVPPPSPKSSGPK 0.400124584561269 0.00455061128120994 -0.124 -0.684333333333333 7.34030881250864 34.3201288472326 -0.124 -0.684333333333333 0.184488423087124 0.000369817207817087 -1.52046075919143 -7.84725315224934 Q96QE3 ATAD5 Q96QE3.S1222.p_ATAD5 Q96QE3_S1222s _1_1_1222_1222 Q96QE3 Q96QE3|A0A075B754 ATPase family AAA domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8410.8410.2 8.29 8.29 99 1 1 1 0 808.9889 1537.0081 S1222s TMT10 1217 (R) KVPPPsPK (S) KVPPPS(1.0)PK K:TMT10,s:Phosphorylated S ATAD5 209620.3 4 33 316.2 367.51 HUMAN 1 -7.3403 -34.3201 PRLAERLSPFLAESK-p O15417;S263-p PRLAERLSPFLAESK 0.478055259464352 0.124181117053365 -0.103 0.185 5.89814065942951 11.9511868710968 -0.103 0.185 0.257149647931744 0.0638089080801488 -1.26639688020674 2.32252619145666 O15417 TNRC18 O15417.S263.p_TNRC18 O15417_S263s _1_1_263_263 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23878.23878.3 13.36 9.35 3.863 2 1 1 0 667.0402 1919.1366 S263s TMT10 258 (R) LAERLsPFLAESK (T) LAERLS(0.99)PFLAES(0.0)K K:TMT10,s:Phosphorylated S TNRC18 316168 6 3 75.1 647.68 HUMAN 1 -5.8981 11.9512 PRLCRQGYACPYYHN-p Q9C0B0;Y232-p PRLCRQGYACPYYHN 0.46037124209973 0.269356727755373 -0.138 -0.145333333333333 6.2109059705996 7.50241623609651 -0.138 -0.145333333333333 0.239281654500438 0.177729032359293 -1.32204904951156 -1.54824407707684 Q9C0B0 UNK Q9C0B0.Y232.p_UNK Q9C0B0_Y232y _1_1_232_232 Q9C0B0 Q9C0B0 RING finger protein unkempt homolog GG20160819_MSz_CCLE_T4D7_pY_Injection_02.9254.9254.3 11.4 11.4 11.401 4 1 1 0 675.9808 1945.9631 Y232y TMT10 230 (R) QGyACPYYHNSK (D) QGY(0.99)ACPY(0.0)Y(0.0)HNS(0.0)K C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y UNK 89851.6 1 1 312.1 11.4 HUMAN 1 -6.2109 -7.5024 PRLDLEDSYTLRGSY-p Q5VWN6;S1848-p PRLDLEDSYTLRGSY 0.617435144253924 0.0810845356188457 -0.125333333333333 -0.236666666666667 3.88637591424462 14.4673769502179 -0.125333333333333 -0.236666666666667 0.408660261505614 0.0357488688811874 -0.8953470181179 -2.77740732657738 Q5VWN6 FAM208B Q5VWN6.S1848.p_FAM208B Q5VWN6_S1848s _1_1_1848_1848 Q5VWN6 Q5VWN6|Q5VWN6-2 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21752.21752.2 14.17 10.06 2.328 3 1 1 0 767.3741 1453.7736 S1848s TMT10 1843 (R) LDLEDsYTLR (G) LDLEDS(0.99)Y(0.0)T(0.0)LR s:Phosphorylated S FAM208B 271861.7 4 13 275.1 391.61 HUMAN 1 -3.8864 -14.4674 PRLERALSLDDKGWR-p Q9NRR6;S85-p PRLERALSLDDKGWR 0.257230165024976 0.0335933468382738 0.479333333333333 -0.524333333333333 11.2031209655134 19.8630838266418 0.479333333333333 -0.524333333333333 0.0758032635114381 0.0103202832560713 2.1917332960548 -3.84606059652076 Q9NRR6 INPP5E Q9NRR6.S85.p_INPP5E Q9NRR6_S85s _1_1_85_85 Q9NRR6 Q9NRR6|Q9NRR6-2 72 kDa inositol polyphosphate 5-phosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16122.16122.2 10.95 3.71 99 1 1 1 0 650.3546 1219.7298 S85s TMT10 83 (R) ALsLDDK (G) ALS(1.0)LDDK K:TMT10,s:Phosphorylated S INPP5E 70888.7 2 1 3349.1 53.19 HUMAN 1 11.2031 -19.8631 PRLGRARSPSPCPFR-p P27987;S174-p PRLGRARSPSPCPFR 0.59778998950284 0.756036718889476 0.075 -0.0406666666666666 4.1276231674342 1.67935190593169 0.075 -0.0406666666666666 0.386578488135138 0.679304997177381 0.941447605210123 -0.436512297399899 P27987 ITPKB P27987.S174.p_ITPKB P27987_S174s _1_1_174_174 P27987 P27987|P27987-2 Inositol-trisphosphate 3-kinase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6763.6763.3 10.98 10.98 2.783 2 1 1 0 495.2403 1403.7415 S174s TMT10 172 (R) ARsPSPCPFR (S) ARS(0.99)PS(0.0)PCPFR C:Carbamidomethylation,s:Phosphorylated S ITPKB 103230.2 4 5 424.1 319.61 HUMAN 1 4.1276 -1.6794 PRLHHSQSPARSLNS-p Q8TE68;S545-p PRLHHSQSPARSLNS 0.0752001385682646 0.441829906813654 0.375666666666667 0.088 24.0558163507358 4.72223361119379 0.375666666666667 0.0880000000000001 0.00393023360692994 0.337113883703921 4.80855058157537 1.05269814222484 Q8TE68 EPS8L1 Q8TE68.S545.p_EPS8L1 Q8TE68_S545s _1_1_545_545 Q8TE68 Q8TE68|B4DKV7|Q8TE68-2|Q8TE68-4|K7ELW3 Epidermal growth factor receptor kinase substrate 8-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.2884.2884.2 13.98 11.05 2.145 2 1 1 0 671.3347 1261.6963 S545s TMT10 540 (R) LHHSQsPAR (S) LHHS(0.0)QS(0.99)PAR s:Phosphorylated S EPS8L1 80534.9 5 10 326.1 361.27 HUMAN 1 24.0558 4.7222 PRLKATVTPSPVKGK-p Q9H1E3;T179-p PRLKATVTPSPVKGK 0.825157658635187 0.0196409770321092 -0.033 -0.578666666666667 1.60829480427695 23.4310107576892 -0.033 -0.578666666666667 0.690510869926891 0.00453835980587505 -0.420195988031391 -4.65172695474155 Q9H1E3 NUCKS1 Q9H1E3.T179.p_NUCKS1 Q9H1E3_T179t _1_1_179_179 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11489.11698.2 13.29 10.6 1.665 3 1 1 0 719.4096 1357.8455 T179t TMT10 176 (K) ATVtPSPVK (G) AT(0.0)VT(0.99)PS(0.0)PVK K:TMT10,t:Phosphorylated T NUCKS1 27295.9 6 12 48.1 767.83 HUMAN 1 -1.6083 -23.431 PRLKKQASFLEAEGG-p Q8WYP3-2;S415-p PRLKKQASFLEAEGG 0.479057002146671 0.0292918931164772 0.142666666666667 0.287 5.88219004153979 20.752162608019 0.142666666666667 0.287 0.258095834784015 0.00840976265747281 1.26354817008557 4.03830288308869 Q8WYP3 RIN2 Q8WYP3.2.S415.p_RIN2 Q8WYP3-2_S415s _1_1_415_415 Q8WYP3-2 Q8WYP3-2 Isoform 2 of Ras and Rab interactor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15328.15328.3 11.29 11.29 99 1 1 1 0 701.7205 2023.1791 S415s TMT10 412 (K) KQAsFLEAEGGAK (T) KQAS(1.0)FLEAEGGAK K:TMT10,s:Phosphorylated S RIN2 106695.4 2 2 4466.1 30.97 HUMAN 1 5.8822 20.7522 PRLNFDYSYGYQEHG-p Q659C4;S173-p PRLNFDYSYGYQEHG 0.387913263195426 0.509198654809084 -0.122333333333333 -0.131666666666667 7.60768037571144 3.93003518605574 -0.122333333333333 -0.131666666666667 0.173473029276017 0.404572613881859 -1.56701988440695 -0.903580854639755 Q659C4 LARP1B Q659C4.S173.p_LARP1B Q659C4_S173s _1_1_173_173 Q659C4 Q659C4|Q659C4-2|Q659C4-9|D6R9W6|G3V0E9|Q659C4-3 La-related protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17645.17645.3 9.07 9.07 9.072 4 1 1 0 729.6492 2106.9719 S173s TMT10 168 (R) LNFDYsYGYQEHGER (T) LNFDY(0.0)S(0.99)Y(0.0)GY(0.0)QEHGER s:Phosphorylated S LARP1B 105833.8 1 2 551.1 274.41 HUMAN 1 -7.6077 -3.93 PRLPRHSSLIDEMFK-p A0A1B0GV68;S583-p PRLPRHSSLIDEMFK 0.160078188700121 0.0286113715981068 -0.342333333333333 0.392333333333333 15.9217773481939 20.8972592606143 -0.342333333333333 0.392333333333333 0.0255753900102739 0.00813343637973156 -3.05318508137342 4.07018430061512 A0A1B0GV68 NotFound A0A1B0GV68.S583.p_NotFound A0A1B0GV68_S583s _1_1_583_583 A0A1B0GV68 A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22833.22833.2 13.76 13.76 1.214 2 1 1 0 872.9402 1664.9082 S583s TMT10 581 (R) HSsLIDEMFK (G) HS(0.0)S(0.99)LIDEMFK K:TMT10,s:Phosphorylated S FARP1 88555.5 7 16 147.1 514.5 HUMAN 1 -15.9218 20.8973 PRLRRDYSYERVGPT-p P48634;S1014-p PRLRRDYSYERVGPT 0.936481555208558 0.0166520020507865 0.0296666666666667 -0.700666666666667 0.554513635189315 24.5589187320282 0.0296666666666667 -0.700666666666667 0.880133672018163 0.00350032304126358 0.158069238128524 -4.92691644526274 P48634 PRRC2A P48634.S1014.p_PRRC2A P48634_S1014s _1_1_1014_1014 P48634 P48634|P48634-3|P48634-2 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2803.2803.2 8.44 4.87 5.188 3 1 1 0 534.711 988.4483 S1014s Hydrogen 1011 (R) RDYsYER (V) RDY(0.0)S(0.99)Y(0.0)ER s:Phosphorylated S PRRC2A 229315.4 2 17 36.1 882.05 HUMAN 1 0.5545 -24.5589 PRLRRGQSADKLGTG-p O60307;S1223-p PRLRRGQSADKLGTG 0.957754275771531 0.00508122719502233 0.0116666666666667 -0.577 0.36544700188865 33.4077520906955 0.0116666666666667 -0.577 0.919295850500246 0.000456273021869917 0.106139023816164 -7.52603626055416 O60307 MAST3 O60307.S1223.p_MAST3 O60307_S1223s _1_1_1223_1223 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6433.6433.2 10.95 10.95 10.946 2 1 1 0 878.9529 1676.9332 S1223s TMT10 1221 (R) GQsADKLGTGER (L) GQS(0.99)ADKLGT(0.0)GER K:TMT10,s:Phosphorylated S MAST3 143933.5 3 32 121.3 549.41 HUMAN 1 0.3654 -33.4078 PRLRRPKSPKLPKAV-p Q96DR7;S113-p PRLRRPKSPKLPKAV 0.49513785471179 0.0386745972221711 -0.118 -0.429 5.62277456046816 18.9712018071352 -0.118 -0.429 0.273982323233913 0.01267301121755 -1.21705998085175 -3.65835418443994 Q96DR7 ARHGEF26 Q96DR7.S113.p_ARHGEF26 Q96DR7_S113s _1_1_113_113 Q96DR7 Q96DR7|Q96DR7-4|Q96DR7-3 Rho guanine nucleotide exchange factor 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5955.5955.3 8.21 8.21 99 1 1 1 0 606.7167 1738.167 S113s Hydrogen 110 (R) RPKsPKLPK (A) RPKS(1.0)PKLPK K:TMT10-Lys-Only,s:Phosphorylated S ARHGEF26 97914.4 2 3 478.1 300.31 HUMAN 1 -5.6228 -18.9712 PRLSRVSSPSPELGT-p Q99501;S490-p PRLSRVSSPSPELGT 0.371382037624444 0.33906606348151 0.166333333333333 -0.0943333333333333 7.9783674458415 6.22307765626011 0.166333333333333 -0.0943333333333333 0.159280736592674 0.238611974425583 1.63140770207714 -1.32388133812418 Q99501 GAS2L1 Q99501.S490.p_GAS2L1 Q99501_S490sS492s_2_2_490_492 Q99501 Q99501|A0A5E8 GAS2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27785.27785.2 8.01 8.01 1.175 6 2 2 0 1068.0024 1975.0698 S490s S492s TMT10 488 (R) VSsPsPELGTTPASIFR (T) VS(0.0)S(0.99)PS(0.99)PELGT(0.0)T(0.0)PAS(0.0)IFR s:Phosphorylated S GAS2L1 73400.1 4 16 1084.1 179.86 HUMAN 1 7.9784 -6.2231 PRMKRASSLNFLNKS-p Q9H0B6;S582-p PRMKRASSLNFLNKS 0.555485523366669 0.350993886673538 -0.079 -0.0993333333333333 4.71308741880114 6.02696764348634 -0.079 -0.0993333333333333 0.337824589815518 0.249633712579082 -1.05120747911565 -1.28905829378058 Q9H0B6 KLC2 Q9H0B6.S582.p_KLC2 Q9H0B6_S582s _1_1_582_582 Q9H0B6 Q9H0B6|Q9H0B6-2|A8MZ87 Kinesin light chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22150.22150.2 9.91 9.91 1.111 2 1 1 0 766.4177 1451.8622 S582s TMT10 580 (R) ASsLNFLNK (S) AS(0.0)S(0.99)LNFLNK K:TMT10,s:Phosphorylated S KLC2 69332.8 19 8 1131.1 174.01 HUMAN 1 -4.7131 -6.027 PRMPQDGSDDEDEEW-p Q13895;S98-p PRMPQDGSDDEDEEW 0.681659995508636 0.609784297999937 -0.058 -0.052 3.12206637476155 2.91866733168877 -0.058 -0.052 0.487296579042373 0.51066167666789 -0.745098156417999 -0.703746496983893 Q13895 BYSL Q13895.S98.p_BYSL Q13895_S98s _1_1_98_98 Q13895 Q13895|F8WBL2 Bystin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23743.23743.2 22 22 8.66 2 1 1 0 1330.0735 2579.186 S98s TMT10 93 (R) MPQDGsDDEDEEWPTLEK (A) MPQDGS(0.99)DDEDEEWPT(0.0)LEK K:TMT10,s:Phosphorylated S BYSL 49828.7 17 1 3971.1 39.99 HUMAN 1 -3.1221 -2.9187 PRMRRQFSAPNLKAG-p O60333-3;S1141-p PRMRRQFSAPNLKAG 0.114688242267433 0.00354462581316227 -0.299 -0.638 19.5811609134432 36.5524058033643 -0.299 -0.639959734901488 0.0110124489620113 0.000221186909047292 -3.789633978046 -8.68366119696704 O60333 KIF1B O60333.3.S1141.p_KIF1B O60333-3_S1141s _1_1_1141_1141 O60333-3 O60333-3 Isoform 3 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13243.13243.3 11.68 7.28 99 1 1 1 0 533.6325 1518.9157 S1141s TMT10 1138 (R) RQFsAPNLK (A) RQFS(1.0)APNLK K:TMT10,s:Phosphorylated S KIF1B 131388.1 8 18 606.2 262.24 HUMAN 1 -19.5812 -36.5524 PRMRRQRSAPDLKES-p O43896;S1092-p PRMRRQRSAPDLKES 0.213619309408308 0.0205007663178049 0.299333333333333 -0.484666666666667 12.9208622042479 23.1098037782715 0.299333333333333 -0.484666666666667 0.0510403659546648 0.00488674437996998 2.49681644808451 -4.57527709119747 O43896 KIF1C O43896.S1092.p_KIF1C O43896_S1092s_1_1_1092_1092 O43896 O43896 Kinesin-like protein KIF1C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8804.8804.2 12.75 12.75 99 1 1 1 0 603.8077 1143.6683 Q1090q S1092s Hydrogen 1090 (R) qRsAPDLK (E) Q(1.0)RS(1.0)APDLK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S KIF1C 123800.2 6 11 954.1 195.97 HUMAN 1 12.9209 -23.1098 PRNESSDSALGDSES-p Q8TF40;S941-p PRNESSDSALGDSES 0.790053523868569 0.0902486627118673 -0.067 0.424 1.97517863605357 13.8205785961784 -0.067 0.424 0.634573798855835 0.0414898763361719 -0.503298128194959 2.65846511571884 Q8TF40 FNIP1 Q8TF40.S941.p_FNIP1 Q8TF40_S941sS946s_2_2_941_946 Q8TF40 Q8TF40|Q8TF40-3 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5154.5154.3 10.29 10.29 2.398 7 2 2 0 915.674 2569.0794 S941s S946s M955m TMT10 936 (R) NESSDsALGDsESEDTGHDmTR (Q) NES(0.0)S(0.0)DS(0.99)ALGDS(0.99)ES(0.0)EDT(0.0)GHDM(1.0)T(0.0)R s:Phosphorylated S,m:Oxidized methionine FNIP1 132549.9 1 27 310.1 372.19 HUMAN 1 -1.9752 13.8206 PRNFSHNSLRGARPQ-p Q14154;S178-p PRNFSHNSLRGARPQ 0.481585053398966 0.00112568182952083 0.273 -1.30733333333333 5.83873002054591 49.1144217665643 0.273 -1.30733333333333 0.260691576217841 1.22619015065236e-05 1.25578089661842 -15.1017978569044 Q14154 KIAA0141 Q14154.S178.p_KIAA0141 Q14154_S178s _1_1_178_178 Q14154 Q14154 Death ligand signal enhancer HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5625.5625.2 12.93 5.25 3.979 2 1 1 0 642.3086 1203.6432 S178s TMT10 173 (R) NFSHNsLR (G) NFS(0.0)HNS(0.99)LR s:Phosphorylated S KIAA0141 56375.3 2 1 3388.1 52.22 HUMAN 1 5.8387 -49.1144 PRNKRSRSPLELEPE-p Q92466;S26-p PRNKRSRSPLELEPE 0.213141082340626 0.256280825430318 0.186 0.135666666666667 12.9538224633154 7.78811474821698 0.186 0.135666666666667 0.0506544674335729 0.166413488667413 2.50274929844915 1.59788892882875 Q92466 DDB2 Q92466.S26.p_DDB2 Q92466_S26s _1_1_26_26 Q92466 Q92466|Q92466-4|Q92466-5|Q92466-2|Q92466-3|A0A087WTQ7 DNA damage-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18891.18891.3 14.49 9.74 99 1 1 1 0 550.963 1570.9092 S26s TMT10 26 (R) sPLELEPEAK (K) S(1.0)PLELEPEAK K:TMT10,s:Phosphorylated S DDB2 48490.7 25 1 1930.1 106.36 HUMAN 1 12.9538 7.7881 PRNSNSNSDSDEDEQ-p Q6PD62;S1041-p PRNSNSNSDSDEDEQ 0.132882806400642 0.0198070948003416 0.256666666666667 0.746666666666667 18.0753427677393 23.3654034344735 0.256666666666667 0.746666666666667 0.0155763509333642 0.00460743966250677 3.47752926899725 4.63604432414322 Q6PD62 CTR9 Q6PD62.S1041.p_CTR9 Q6PD62_S1041sS1043s_2_2_1041_1043 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4729.4729.3 9.25 9.25 1.165 4 2 2 0 900.7419 2540.2792 S1041s S1043s TMT10 1036 (R) NSNSNsDsDEDEQRKK (C) NS(0.0)NS(0.0)NS(0.99)DS(0.99)DEDEQRKK K:TMT10,s:Phosphorylated S CTR9 134412.8 4 14 152.1 508.81 HUMAN 1 18.0753 23.3654 PRPALQPSPSIRLPL-p Q9BXI6;S407-p PRPALQPSPSIRLPL 0.904619854374241 0.155887827199907 0.018 -0.145 0.856197717464614 10.6144700679053 0.018 -0.144725637113792 0.821070083091943 0.0868066493496622 0.237407694180005 -2.08779357277726 Q9BXI6 TBC1D10A Q9BXI6.S407.p_TBC1D10A Q9BXI6_S407s _1_1_407_407 Q9BXI6 Q9BXI6-2|B5MD46 TBC1 domain family member 10A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28017.28017.4 19.35 19.35 2.649 3 1 1 0 928.7716 3632.094 S407s TMT10 392 (K) AILDAEPGPRPALQPsPSIRLPLDAPLPGSK (A) AILDAEPGPRPALQPS(0.99)PS(0.0)IRLPLDAPLPGS(0.0)K K:TMT10,s:Phosphorylated S TBC1D10A 57630.1 6 6 1460.1 140.31 HUMAN 1 0.8562 -10.6145 PRPDHPGTPPHKTFR-p P30291;T173-p PRPDHPGTPPHKTFR 0.682078728827876 0.00365538422069127 0.0716666666666667 -0.942666666666667 3.11401713550671 36.1887079471051 0.0716666666666667 -0.942666666666667 0.488200574840558 0.000240507821919885 0.743476831188237 -8.54228649224279 P30291 WEE1 P30291.T173.p_WEE1 P30291_T173t _1_1_173_173 P30291 P30291 Wee1-like protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3498.3498.5 15.48 10.43 15.076 2 1 1 0 424.2295 2037.1506 T173t TMT10 164 (R) RSPRPDHPGtPPHK (T) RS(0.0)PRPDHPGT(0.99)PPHK K:TMT10,t:Phosphorylated T WEE1 72280.8 4 4 2739.1 72.21 HUMAN 1 3.114 -36.1887 PRPDSSGSH______-p Q9C0H2;S522-p PRPDSSGSH______ 0.481330488339782 0.966536417724756 0.128 -0.00433333333333332 5.84503424843513 0.209340824084727 0.128 -0.00433333333333332 0.260313430299274 0.952940791223821 1.25690810623728 -0.0617940681534127 Q9C0H2 TTYH3 Q9C0H2.S522.p_TTYH3 Q9C0H2_S522s _1_1_522_522 Q9C0H2 Q9C0H2|Q9C0H2-2|Q9C0H2-3 Protein tweety homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7846.7846.3 14.23 14.23 2.892 6 1 1 0 637.9643 1831.9136 S522s TMT10 509 (K) YLATSQPRPDSSGsH (-) Y(0.0)LAT(0.0)S(0.0)QPRPDS(0.0)S(0.0)GS(0.99)H s:Phosphorylated S TTYH3 58513.6 1 3 3807.1 42.68 HUMAN 1 5.845 -0.2093 PRPFGFQSG______-p Q9H0U9;S436-p PRPFGFQSG______ 0.479702352789039 0.20090220225381 0.119 -0.137333333333333 5.8728009116592 9.16931671154408 0.119 -0.137333333333333 0.258654422746353 0.121078861554812 1.26187080835818 -1.83700200710089 Q9H0U9 TSPYL1 Q9H0U9.S436.p_TSPYL1 Q9H0U9_S436s _1_1_436_436 Q9H0U9 Q9H0U9 Testis-specific Y-encoded-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17654.17654.4 9.15 9.15 99 1 1 1 0 637.5944 2467.3884 S436s TMT10 419 (R) RRPLREPVEIPRPFGFQsG (-) RRPLREPVEIPRPFGFQS(1.0)G s:Phosphorylated S TSPYL1 49419.7 1 2 5044.1 23.56 HUMAN 1 5.8728 -9.1693 PRPGTSRSMGNLLEK-p Q99959;S251-p PRPGTSRSMGNLLEK 0.369805323847201 0.881135418238987 0.130333333333333 0.0206666666666667 8.01276048221907 0.772442000421542 0.130333333333333 0.0206666666666667 0.158024327860239 0.837058479010419 1.63737414965447 0.215761037067545 Q99959 PKP2 Q99959.S251.p_PKP2 Q99959_S251s _1_1_251_251 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20906.20906.2 13.26 13.26 99 1 1 1 0 715.3795 1349.7863 S251s TMT10 251 (R) sMGNLLEK (E) S(1.0)MGNLLEK K:TMT10,s:Phosphorylated S PKP2 97926.6 10 13 257.1 399.17 HUMAN 1 8.0128 0.7724 PRPKERESPPPSALQ-p Q86VE0;S202-p PRPKERESPPPSALQ 0.183383326299768 0.681044026471969 0.229666666666667 -0.0426666666666666 14.4848054753755 2.28142120338006 0.229666666666667 -0.0426666666666666 0.0356056937807315 0.591368080749829 2.78237284058501 -0.570190854389858 Q86VE0 MYPOP Q86VE0.S202.p_MYPOP Q86VE0_S202s _1_1_202_202 Q86VE0 Q86VE0 Myb-related transcription factor, partner of profilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15938.15938.3 10.66 10.66 6.512 2 1 1 0 737.3881 2130.1869 S202s TMT10 199 (K) EREsPPPSALQPVQLPR (L) ERES(0.99)PPPS(0.0)ALQPVQLPR s:Phosphorylated S MYPOP 42678.8 1 2 3859.1 41.6 HUMAN 1 14.4848 -2.2814 PRPLDRESPGVENKL-p O00512;S278-p PRPLDRESPGVENKL 0.255894371706111 0.012828944099078 -0.253666666666667 0.377333333333333 11.2513458392315 26.3585633672076 -0.253666666666667 0.377333333333333 0.0749661859917972 0.00231282974061367 -2.20020288598543 5.38908706659674 O00512 BCL9 O00512.S278.p_BCL9 O00512_S278s _1_1_278_278 O00512 O00512 B-cell CLL/lymphoma 9 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18180.18180.5 14.68 14.68 8.411 2 1 1 0 801.8531 3925.2631 S278s TMT10 254 (R) LQPTPPIPAPAPKPAAPPRPLDREsPGVENK (L) LQPT(0.0)PPIPAPAPKPAAPPRPLDRES(0.99)PGVENK K:TMT10,s:Phosphorylated S BCL9 149515.8 5 7 313.1 369.9 HUMAN 1 -11.2513 26.3586 PRPLRAASPFRSSVQ-p O95817;S264-p PRPLRAASPFRSSVQ 0.744503481010559 0.716001525109154 -0.115333333333333 -0.0963333333333333 2.43072824780204 1.99526862225402 -0.115333333333333 -0.0963333333333333 0.57138281616599 0.631645109212362 -0.602209752319683 -0.507695093443748 O95817 BAG3 O95817.S264.p_BAG3 O95817_S264s _1_1_264_264 O95817 O95817 BAG family molecular chaperone regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8607.8607.3 14.04 8.67 1.77 5 1 1 0 606.3019 1736.9241 S264s TMT10 262 (R) AAsPFRSSVQGASSR (E) AAS(0.99)PFRS(0.0)S(0.0)VQGAS(0.0)S(0.0)R s:Phosphorylated S BAG3 61764.7 3 6 416.1 321.05 HUMAN 1 -2.4307 -1.9953 PRPLVLPSPLVTPGS-p Q96QC0;S471-p PRPLVLPSPLVTPGS 0.25586708752233 0.166565653829041 0.276 -0.176333333333333 11.2526452443961 10.2366405012389 0.276 -0.176333333333333 0.074943759531861 0.0946969409307748 2.20043116101349 -2.02201505968821 Q96QC0 PPP1R10 Q96QC0.S471.p_PPP1R10 Q96QC0_S471s _1_1_471_471 Q96QC0 Q96QC0 Serine/threonine-protein phosphatase 1 regulatory subunit 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31063.31063.4 12.09 12.09 4.461 4 1 1 0 774.4073 3014.6447 S471s TMT10 459 (K) VPWVCPRPLVLPsPLVTPGSNSQER (Y) VPWVCPRPLVLPS(0.99)PLVT(0.0)PGS(0.0)NS(0.0)QER C:Carbamidomethylation,s:Phosphorylated S PPP1R10 99398.3 1 5 592.1 264.27 HUMAN 1 11.2526 -10.2366 PRPPNAPSQDGKEAK-p P16989;S346-p PRPPNAPSQDGKEAK 0.407721188042632 0.131929320140958 0.113 -0.264666666666667 7.19467174537114 11.5954154632379 0.113 -0.264666666666667 0.190779991658597 0.0692561673085873 1.4950482945786 -2.2596881548848 P16989 YBX3 P16989.S346.p_YBX3 P16989_S346s _1_1_346_346 P16989 P16989|P16989-2 Y-box-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.3705.3705.4 9.85 9.85 99 1 1 1 0 529.2897 2034.1721 S346s TMT10 337 (R) RRPRPPNAPsQDGK (E) RRPRPPNAPS(1.0)QDGK K:TMT10,s:Phosphorylated S YBX3 40089.2 2 5 929.1 199.34 HUMAN 1 7.1947 -11.5954 PRPQAVLSEQQNGLA-p Q9HBR0;S612-p PRPQAVLSEQQNGLA 0.915285623353346 0.555194562891215 -0.0283333333333333 0.12 0.752342054358668 3.44366917179217 -0.0283333333333334 0.12 0.840941518127575 0.452515107337986 -0.210547755620432 0.809048143442498 Q9HBR0 SLC38A10 Q9HBR0.S612.p_SLC38A10 Q9HBR0_S612s _1_1_612_612 Q9HBR0 Q9HBR0|Q9HBR0-2|Q9HBR0-3 Putative sodium-coupled neutral amino acid transporter 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14755.14755.4 15.88 14.24 99 1 1 1 0 745.9032 2900.6107 S612s TMT10 602 (R) GLHPRPQAVLsEQQNGLAVGGGEK (A) GLHPRPQAVLS(1.0)EQQNGLAVGGGEK K:TMT10,s:Phosphorylated S SLC38A10 120444.8 1 1 5847.1 15.88 HUMAN 1 -0.7523 3.4437 PRPQGRKTPELGIVP-p Q8TEH3;T707-p PRPQGRKTPELGIVP 0.668622007017775 0.0929918864170527 0.0953333333333333 0.258333333333333 3.2698664818848 13.6447081177656 0.0953333333333334 0.258333333333333 0.470991806196765 0.0432045203695525 0.774711914419023 2.62638740459389 Q8TEH3 DENND1A Q8TEH3.T707.p_DENND1A Q8TEH3_T707t _1_1_707_707 Q8TEH3 Q8TEH3-6|Q8TEH3-7 DENN domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21993.21993.5 17.46 17.46 99 1 1 1 0 535.7266 2594.6365 T707t TMT10 706 (R) KtPELGIVPPPPIPRPAK (L) KT(1.0)PELGIVPPPPIPRPAK K:TMT10,t:Phosphorylated T DENND1A 111202.8 4 7 882.1 207.04 HUMAN 1 3.2699 13.6447 PRPQRSCSLDLGDAG-p Q6PJG9;S585-p PRPQRSCSLDLGDAG 0.409353922246247 0.451376038979078 0.123 0.0723333333333333 7.15032831430468 4.60496867190684 0.123 0.0723333333333334 0.192737920328478 0.346340382946412 1.48730258602738 1.03094748490598 Q6PJG9 LRFN4 Q6PJG9.S585.p_LRFN4 Q6PJG9_S585s _1_1_585_585 Q6PJG9 Q6PJG9 Leucine-rich repeat and fibronectin type-III domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18084.18084.2 12.76 9.36 3.145 4 1 1 0 1037.4361 1993.8945 S585s TMT10 583 (R) SCsLDLGDAGCYGYAR (R) S(0.0)CS(0.99)LDLGDAGCY(0.0)GY(0.0)AR C:Carbamidomethylation,s:Phosphorylated S LRFN4 67771.9 4 3 2562.1 78.45 HUMAN 1 7.1503 4.605 PRPRAPESDTGDEDQ-p Q9H4G0;S578-p PRPRAPESDTGDEDQ 0.825130077485234 0.118077884020604 0.0356666666666667 0.17 1.60920219175637 12.234602471878 0.0356666666666667 0.17 0.690366614014464 0.0597777759313097 0.420405819541818 2.37280568777399 Q9H4G0 EPB41L1 Q9H4G0.S578.p_EPB41L1 Q9H4G0_S578sT580t_2_2_578_580 Q9H4G0 Q9H4G0|A0A0C4DH22|Q9H4G0-2|Q9H4G0-3 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19740.19740.3 15 15 9.567 3 2 2 0 1005.111 2853.379 S578s T580t TMT10 575 (R) APEsDtGDEDQDQERDTVFLK (D) APES(0.99)DT(0.99)GDEDQDQERDT(0.0)VFLK K:TMT10,s:Phosphorylated S,t:Phosphorylated T EPB41L1 99071.6 4 29 174.1 483.37 HUMAN 1 1.6092 12.2346 PRPRPATSTPDLASH-p Q15678;S578-p PRPRPATSTPDLASH 0.471067248334803 0.0697146669156021 0.097 0.343666666666667 6.03458958028584 15.3813919690957 0.097 0.343666666666667 0.249195985689096 0.028964151010051 1.29072310726858 2.94830813828392 Q15678 PTPN14 Q15678.S578.p_PTPN14 Q15678_S578s _1_1_578_578 Q15678 Q15678 Tyrosine-protein phosphatase non-receptor type 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4911.4911.2 13.89 13.89 1.134 4 1 1 0 666.8006 1252.628 S578s Hydrogen 575 (R) PATsTPDLASHR (H) PAT(0.0)S(0.99)T(0.0)PDLAS(0.0)HR s:Phosphorylated S PTPN14 136114.4 7 8 337.1 355.06 HUMAN 1 6.0346 15.3814 PRPSFDASASEEEEE-p Q9H4L4;S73-p PRPSFDASASEEEEE 0.758824185220205 0.30870085018357 0.0436666666666667 0.098 2.29597489574653 6.74688893668199 0.0436666666666667 0.098 0.589389657178776 0.211500357758213 0.573394023840655 1.41625338975581 Q9H4L4 SENP3 Q9H4L4.S73.p_SENP3 Q9H4L4_S73sS75s_2_2_73_75 Q9H4L4 Q9H4L4 Sentrin-specific protease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24646.24646.4 13.2 13.2 3.144 3 2 2 0 1160.234 4477.9753 S73s S75s TMT10 62 (R) RLPVPRPSFDAsAsEEEEEEEEEEDEDEEEEVAAWR (L) RLPVPRPS(0.0)FDAS(0.99)AS(0.99)EEEEEEEEEEDEDEEEEVAAWR s:Phosphorylated S SENP3 65636.2 5 9 396.1 329.46 HUMAN 1 2.296 6.7469 PRPSPKQSPRNSPRS-p Q9P270;S357-p PRPSPKQSPRNSPRS 0.596164475729764 0.0121085157327048 0.0933333333333333 -0.441 4.14560088482934 26.7719640231094 0.0933333333333333 -0.441 0.38498154539157 0.00210282725675547 0.944861007769527 -5.49951242680836 Q9P270 SLAIN2 Q9P270.S357.p_SLAIN2 Q9P270_S357s _1_1_357_357 Q9P270 Q9P270|D6RIF6 SLAIN motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.3393.3393.4 9.75 5.55 2.971 3 1 1 0 473.0096 1809.0495 S357s TMT10 348 (R) NSPRPSPKQsPR (N) NS(0.0)PRPS(0.0)PKQS(0.99)PR K:TMT10,s:Phosphorylated S SLAIN2 62770.5 4 13 277.1 389.63 HUMAN 1 4.1456 -26.772 PRPSPLPSPQPAPRR-p Q16584;S793-p PRPSPLPSPQPAPRR 0.704484897054693 0.304199893484004 -0.0573333333333333 -0.111 2.86057554070528 6.82547461673173 -0.0573333333333333 -0.111 0.517538241610412 0.207707672079239 -0.691948499705105 -1.43004228030559 Q16584 MAP3K11 Q16584.S793.p_MAP3K11 Q16584_S793s _1_1_793_793 Q16584 Q16584|Q16584-2|E9PID4 Mitogen-activated protein kinase kinase kinase 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29327.29327.4 17.72 17.72 2.104 4 1 1 0 717.1231 2785.4987 S793s TMT10 776 (R) IDPWSFVSAGPRPSPLPsPQPAPR (R) IDPWS(0.0)FVS(0.0)AGPRPS(0.0)PLPS(0.99)PQPAPR s:Phosphorylated S MAP3K11 93313.9 5 17 536.1 278.53 HUMAN 1 -2.8606 -6.8255 PRPYRQVSFPDDDEE-p Q7Z698;S206-p PRPYRQVSFPDDDEE 0.103884021690019 0.0262377057275732 -0.391333333333333 -0.337 20.7674553444133 21.4927489899882 -0.391333333333333 -0.337 0.00838020158283501 0.0070912876272831 -4.04562480261847 -4.20257525586035 Q7Z698 SPRED2 Q7Z698.S206.p_SPRED2 Q7Z698_S206s _1_1_206_206 Q7Z698 Q7Z698|Q7Z698-2 Sprouty-related, EVH1 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19932.19932.2 16.13 16.13 99 1 1 1 0 929.4297 1777.8806 S206s TMT10 204 (R) QVsFPDDDEEIVR (I) QVS(1.0)FPDDDEEIVR s:Phosphorylated S SPRED2 48755.5 4 3 3656.1 45.99 HUMAN 1 -20.7675 -21.4927 PRQKDKFSPFPVQDR-p Q9UQ35;S1188-p PRQKDKFSPFPVQDR 0.14666043453421 0.271857481939837 -0.458666666666667 0.121 16.9662261438021 7.44997283134847 -0.458666666666667 0.121 0.0201083939767538 0.179888216856441 -3.25598570664361 1.53911814269815 Q9UQ35 SRRM2 Q9UQ35.S1188.p_SRRM2 Q9UQ35_S1188s _1_1_1188_1188 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24052.24052.3 14.74 9.02 6.444 3 1 1 0 997.5373 2910.6332 S1188s TMT10 1185 (K) DKFsPFPVQDRPESSLVFK (D) DKFS(0.99)PFPVQDRPES(0.0)S(0.0)LVFK K:TMT10,s:Phosphorylated S SRRM2 300351.7 7 67 2.1 3310.34 HUMAN 1 -16.9662 7.45 PRQNRLDSPLSNRYA-p Q5VT97;S1082-p PRQNRLDSPLSNRYA 0.540853546489198 0.0273891955781079 0.17 -0.466 4.9252607381782 21.1935626647279 0.17 -0.466 0.321716937710681 0.00759702811303381 1.09034377230396 -4.13574540903202 Q5VT97 SYDE2 Q5VT97.S1082.p_SYDE2 Q5VT97_S1082s _1_1_1082_1082 Q5VT97 Q5VT97 Rho GTPase-activating protein SYDE2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7061.7061.3 8.55 4.1 2.661 2 1 1 0 536.9405 1528.8393 S1082s TMT10 1077 (R) QNRLDsPLSNR (Y) QNRLDS(0.99)PLS(0.0)NR s:Phosphorylated S SYDE2 134825.4 1 5 2624.1 76.52 HUMAN 1 4.9253 -21.1936 PRQPTVASPAESDEE-p Q01826-2;S665-p PRQPTVASPAESDEE 0.437983998739541 0.613120573475258 0.103333333333333 -0.0506666666666666 6.60240091053012 2.88677738516499 0.103333333333333 -0.0506666666666666 0.218655249776823 0.514425231255345 1.39121988395301 -0.697224409543591 Q01826 SATB1 Q01826.2.S665.p_SATB1 Q01826-2_S665s _1_1_665_665 Q01826-2 Q01826-2 Isoform 2 of DNA-binding protein SATB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8779.9405.4 18.32 13.34 2.477 3 1 1 0 722.6224 2807.5052 S665s TMT10 656 (R) LPPRQPTVAsPAESDEENRQK (T) LPPRQPT(0.0)VAS(0.99)PAES(0.0)DEENRQK K:TMT10,s:Phosphorylated S SATB1 89467.4 19 10 821.1 218.79 HUMAN 1 6.6024 -2.8868 PRQSHSGSISPYPKV-p Q9UQ35;S992-p PRQSHSGSISPYPKV 0.858494501092491 0.571429639898807 -0.029 0.0616666666666667 1.29201604917409 3.2763448064025 -0.029 0.0616666666666667 0.742674299187276 0.470289756487528 -0.345604533118962 0.775888480554365 Q9UQ35 SRRM2 Q9UQ35.S992.p_SRRM2 Q9UQ35_S992sS994s_2_2_992_994 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9875.9875.2 12.39 12.39 1.993 5 2 2 0 953.4499 1745.9587 S992s S994s TMT10 987 (R) QSHSGsIsPYPK (V) QS(0.0)HS(0.0)GS(0.99)IS(0.99)PY(0.0)PK K:TMT10,s:Phosphorylated S SRRM2 300351.7 18 197 2.1 3310.34 HUMAN 1 -1.292 3.2763 PRRAAAKSPDLSNQN-p P48634;S1306-p PRRAAAKSPDLSNQN 0.796215746024327 0.0351428374034682 0.0376666666666667 0.321 1.91331058548724 19.5770035899368 0.0376666666666667 0.321 0.643678408528654 0.0110229957763511 0.489517297058339 3.78530627324575 P48634 PRRC2A P48634.S1306.p_PRRC2A P48634_S1306s _1_1_1306_1306 P48634 P48634|P48634-3|P48634-2 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17001.17001.4 33.01 33.01 2.674 9 1 1 0 1035.719 4059.8692 S1306s TMT10 1302 (R) AAAKsPDLSNQNSDQANEEWETASESSDFTSER (R) AAAKS(0.99)PDLS(0.0)NQNS(0.0)DQANEEWET(0.0)AS(0.0)ES(0.0)S(0.0)DFT(0.0)S(0.0)ER K:TMT10,s:Phosphorylated S PRRC2A 229315.4 8 25 36.1 882.05 HUMAN 1 1.9133 19.577 PRRARHDSPDPSPPR-p Q9BRD0;S197-p PRRARHDSPDPSPPR 0.691847298094592 0.842830326093416 0.0866666666666667 0.04 3.00013870827266 1.04301826813081 0.0866666666666667 0.0399999999999999 0.501171226584081 0.786498997128164 0.72044047173505 0.284606370679748 Q9BRD0 BUD13 Q9BRD0.S197.p_BUD13 Q9BRD0_S197sS201s_2_2_197_201 Q9BRD0 Q9BRD0|Q9BRD0-2 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4528.4528.2 11.34 11.34 99 2 2 2 0 747.3049 1333.6698 S197s S201s TMT10 195 (R) HDsPDPsPPR (R) HDS(1.0)PDPS(1.0)PPR s:Phosphorylated S BUD13 70576.6 5 27 171.1 490.08 HUMAN 1 3.0001 1.043 PRRARHDTPDPSPLR-p Q9BRD0;T159-p PRRARHDTPDPSPLR 0.203825485912988 0.00949153116870816 0.279 0.613666666666667 13.38253895051 28.5442980020662 0.279 0.613666666666667 0.0458929637264971 0.00139820290397025 2.58023231850883 5.99226563683376 Q9BRD0 BUD13 Q9BRD0.T159.p_BUD13 Q9BRD0_T159t _1_1_159_159 Q9BRD0 Q9BRD0|Q9BRD0-2 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4004.4004.3 17.08 17.08 7.21 2 1 1 0 481.2252 1361.692 T159t Hydrogen 155 (R) ARHDtPDPSPLR (G) ARHDT(0.99)PDPS(0.0)PLR t:Phosphorylated T BUD13 70576.6 6 7 171.1 490.08 HUMAN 1 13.3825 28.5443 PRRAWGKSPTDSVLK-p Q96PY6-3;S834-p PRRAWGKSPTDSVLK 0.0948633510902073 0.0442350267295786 -0.334 -0.322 21.7391891550385 18.1356873747711 -0.334 -0.322 0.00670009691196832 0.015361416429763 -4.26254198730351 -3.48689620922926 Q96PY6 NEK1 Q96PY6.3.S834.p_NEK1 Q96PY6-3_S834s _1_1_834_834 Q96PY6-3 Q96PY6-3|Q96PY6-6|Q96PY6-2|Q96PY6-4 Isoform 3 of Serine/threonine-protein kinase Nek1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14206.14206.3 8.04 8.04 1.342 3 1 1 0 738.0874 2132.2795 S834s TMT10 829 (R) RAWGKsPTDSVLK (I) RAWGKS(0.99)PT(0.0)DS(0.0)VLK K:TMT10,s:Phosphorylated S NEK1 146666.9 2 3 1537.1 133.31 HUMAN 1 -21.7392 -18.1357 PRRDAMPSDANLNSI-p Q08209;S492-p PRRDAMPSDANLNSI 0.519266491867883 0.96867600764564 0.104666666666667 0.00433333333333336 5.25646431039824 0.195340252473352 0.104666666666667 0.00433333333333337 0.29809422943614 0.956017791889648 1.15085567491501 0.0577481093515571 Q08209 PPP3CA Q08209.S492.p_PPP3CA Q08209_S492s _1_1_492_492 Q08209 Q08209 Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17308.17308.3 8.33 8.33 1.603 2 1 1 0 676.6683 1948.021 S492s TMT10 488 (R) DAMPsDANLNSINK (A) DAMPS(0.99)DANLNS(0.0)INK K:TMT10,s:Phosphorylated S PPP3CA 59371.4 1 7 3004.1 63.48 HUMAN 1 5.2565 0.1953 PRRGGVPSWFGL___-p Q16540;S149-p PRRGGVPSWFGL___ 0.550419878360568 0.363676787782655 -0.0813333333333333 0.104 4.78368535594242 5.82451244775964 -0.0813333333333333 0.104 0.332377383270995 0.26154640516343 -1.06426401181413 1.25294818082117 Q16540 MRPL23 Q16540.S149.p_MRPL23 Q16540_S149s _1_1_149_149 Q16540 Q16540 39S ribosomal protein L23, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30344.30344.2 7.26 7.26 99 1 1 1 0 692.8531 1304.7313 S149s TMT10 144 (R) RGGVPsWFGL (-) RGGVPS(1.0)WFGL s:Phosphorylated S MRPL23 17780.9 1 1 7213.1 7.26 HUMAN 1 -4.7837 5.8245 PRRKRLKSDERPVHI-p Q9UPN9;S1119-p PRRKRLKSDERPVHI 0.00874686268802314 0.00153570152759703 -1.47133333333333 -1.59033333333333 50.2164424148098 45.391074627143 -1.47133333333333 -1.59033333333333 9.51383814160409e-06 2.88996469511418e-05 -15.8892570270153 -12.8438654623589 Q9UPN9 TRIM33 Q9UPN9.S1119.p_TRIM33 Q9UPN9_S1119s _1_1_1119_1119 Q9UPN9 Q9UPN9|Q9UPN9-2 E3 ubiquitin-protein ligase TRIM33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10008.10008.4 12.86 5.29 99 1 1 1 0 523.0586 2009.2475 S1119s TMT10 1117 (R) LKsDERPVHIK (-) LKS(1.0)DERPVHIK K:TMT10,s:Phosphorylated S TRIM33 124699.1 5 9 1379.1 148.46 HUMAN 1 -50.2164 -45.3911 PRRKRTPSPSYQRTL-p Q5T200;S356-p PRRKRTPSPSYQRTL 0.932495418439431 0.805074553506459 0.013 0.0323333333333333 0.598916268005263 1.31836060375031 0.013 0.0323333333333333 0.871180956035184 0.738182830441033 0.170005765668831 0.351897461657067 Q5T200 ZC3H13 Q5T200.S356.p_ZC3H13 Q5T200_T354tS356s_2_2_354_356 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3223.3223.2 9.8 9.8 9.8 4 2 2 0 548.1992 935.4581 T354t S356s Hydrogen 354 (R) tPsPSYQR (T) T(0.99)PS(0.99)PS(0.0)Y(0.0)QR t:Phosphorylated T,s:Phosphorylated S ZC3H13 197316.7 4 37 24.1 987.82 HUMAN 1 0.5989 1.3184 PRRPRERSPGPVDTR-p Q8N350-4;S414-p PRRPRERSPGPVDTR 0.343971444723671 0.394298827873055 -0.139 0.0913333333333334 8.60783456686685 5.3729295800549 -0.139 0.0913333333333334 0.137789632971151 0.290206437536773 -1.74047709217905 1.17172950331983 Q8N350 CBARP Q8N350.4.S414.p_CBARP Q8N350-4_S414s _1_1_414_414 Q8N350-4 Q8N350-4 Isoform 2 of Voltage-dependent calcium channel beta subunit-associated regulatory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4502.4502.3 11.6 6.34 8.215 2 1 1 0 474.9035 1342.7276 S414s TMT10 412 (R) ERsPGPVDTR (S) ERS(0.99)PGPVDT(0.0)R s:Phosphorylated S CBARP 48003.4 1 9 1993.2 103.67 HUMAN 1 -8.6078 5.3729 PRRQRQLSMSSADSA-p Q5JSZ5;S416-p PRRQRQLSMSSADSA 0.061845967264616 0.0067391666588249 -0.573666666666667 -0.623666666666667 26.3235033141573 31.1788004846157 -0.573666666666667 -0.623666666666667 0.00233157649557848 0.000762289524270093 -5.38698008931513 -6.78763042021001 Q5JSZ5 PRRC2B Q5JSZ5.S416.p_PRRC2B Q5JSZ5_S416s _1_1_416_416 Q5JSZ5 Q5JSZ5|Q5JSZ5-5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13241.13241.2 15.95 11.75 2.216 4 1 1 0 924.9443 1768.9151 S416s TMT10 414 (R) QLsMSSADSADAK (R) QLS(0.99)MS(0.0)S(0.0)ADS(0.0)ADAK K:TMT10,s:Phosphorylated S PRRC2B 244103.4 6 56 36.2 882.05 HUMAN 1 -26.3235 -31.1788 PRRRHRPSPPATPPP-p A9Z1X7;S397-p PRRRHRPSPPATPPP 0.873798109188382 0.0227405705349733 0.0263333333333333 0.350333333333333 1.14715119278489 22.4361702883401 0.0263333333333333 0.350333333333333 0.767865014546524 0.00570667278396475 0.310393081717791 4.41759805333257 A9Z1X7 NotFound A9Z1X7.S397.p_NotFound A9Z1X7_S397s _1_1_397_397 A9Z1X7 A9Z1X7|Q8IYB3|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5631.5845.3 13.16 13.16 2.302 2 1 1 0 607.3379 1740.0321 S397s TMT10 394 (R) HRPsPPATPPPK (T) HRPS(0.99)PPAT(0.0)PPPK K:TMT10,s:Phosphorylated S SRRM1 103445.7 5 9 8.1 1346.57 HUMAN 1 1.1472 22.4362 PRRRRTPTPPPRRRT-p A9Z1X7;T583-p PRRRRTPTPPPRRRT 0.685814166852822 0.178499748371498 0.0896666666666667 0.331333333333333 3.07341423253746 9.84461621597176 0.0896666666666667 0.331333333333333 0.492786244724307 0.103642618888807 0.735284514963281 1.95395084641014 A9Z1X7 NotFound A9Z1X7.T583.p_NotFound A9Z1X7_T581tT583t_2_2_581_583 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2313.2521.3 9.6 9.6 99 2 2 2 0 413.1912 1077.6276 T581t T583t Hydrogen 579 (R) RRtPtPPPR (R) RRT(1.0)PT(1.0)PPPR t:Phosphorylated T SRRM1 103445.7 10 62 8.1 1346.57 HUMAN 1 3.0734 9.8446 PRRSAPPSPLCRSLS-p O43189;S515-p PRRSAPPSPLCRSLS 0.161635164088614 0.579245053525822 0.258 0.0606666666666667 15.8424031823638 3.20069097078566 0.258 0.0606666666666667 0.0260471182555004 0.478553947421641 3.0379881867118 0.760777336085171 O43189 PHF1 O43189.S515.p_PHF1 O43189_S515s _1_1_515_515 O43189 O43189 PHD finger protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8326.8515.2 11.54 6.99 7.141 2 1 1 0 647.32 1213.6561 S515s TMT10 511 (R) SAPPsPLCR (S) S(0.0)APPS(0.99)PLCR C:Carbamidomethylation,s:Phosphorylated S PHF1 63416.9 4 5 2838.1 68.46 HUMAN 1 15.8424 3.2007 PRRSRRPSPLAPRPP-p Q9UMN6;S1917-p PRRSRRPSPLAPRPP 0.456945741797906 0.033367483279227 0.155333333333333 -0.446666666666667 6.26610396774463 19.9053443156762 0.155333333333333 -0.446666666666667 0.236259675552351 0.0102203452884061 1.33183253118875 -3.85508004277094 Q9UMN6 KMT2B Q9UMN6.S1917.p_KMT2B Q9UMN6_S1917s _1_1_1917_1917 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.6364.6364.4 13.13 13.13 13.13 2 1 1 0 434.9938 1656.9859 S1917s TMT10 1915 (R) RPsPLAPRPPPSR (W) RPS(0.99)PLAPRPPPS(0.0)R s:Phosphorylated S KMT2B 297845.7 3 16 388.1 332.76 HUMAN 1 6.2661 -19.9053 PRRSRSGSSPEVKDK-p Q9UQ35;S1600-p PRRSRSGSSPEVKDK 0.418116670228811 0.347991046962556 0.168 0.118666666666667 6.98765090548971 6.07723523841265 0.168 0.118666666666667 0.200094388552273 0.246760974205959 1.45885139532669 1.29799821802998 Q9UQ35 SRRM2 Q9UQ35.S1600.p_SRRM2 Q9UQ35_S1598sS1600sS1601s_3_3_1598_1601 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7956.7956.3 9.54 9.54 99 3 3 3 0 662.3037 1744.9958 S1598s S1600s S1601s Hydrogen 1598 (R) sGssPEVKDKPR (A) S(1.0)GS(1.0)S(1.0)PEVKDKPR K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 3 273 2.1 3310.34 HUMAN 1 6.9877 6.0772 PRRSRSHSDNDRFKH-p O75494;S160-p PRRSRSHSDNDRFKH 0.189392859052769 0.0045642445280084 0.232666666666667 0.846333333333333 14.1482195596352 34.2777019815901 0.232666666666667 0.846333333333333 0.0384749482209534 0.000373447711009109 2.72017264300741 7.83205984130434 O75494 SRSF10 O75494.S160.p_SRSF10 O75494_S160s _1_1_160_160 O75494 O75494|O75494-2 Serine/arginine-rich splicing factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4376.4376.3 8.57 8.57 2.211 2 1 1 0 548.6028 1563.828 S160s TMT10 158 (R) SHsDNDRFK (H) S(0.0)HS(0.99)DNDRFK K:TMT10,s:Phosphorylated S SRSF10 31357 1 2 867.1 210.03 HUMAN 1 14.1482 34.2777 PRRSRSVSPCSNVES-p Q9UQ35;S954-p PRRSRSVSPCSNVES 0.165572533170776 0.174474382444579 -0.224 0.326666666666667 15.6202768286975 9.97272132841523 -0.224 0.326666666666667 0.0274139942362899 0.100630091402032 -2.99561435427572 1.97617490541436 Q9UQ35 SRRM2 Q9UQ35.S954.p_SRRM2 Q9UQ35_S954s _1_1_954_954 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6856.6856.2 13.1 6.84 1.338 4 1 1 0 765.8446 1450.7158 S954s TMT10 952 (R) SVsPCSNVESR (L) S(0.0)VS(0.99)PCS(0.0)NVES(0.0)R C:Carbamidomethylation,s:Phosphorylated S SRRM2 300351.7 1 41 2.1 3310.34 HUMAN 1 -15.6203 9.9727 PRRSSQPSPTAVPAS-p Q3KQU3;S116-p PRRSSQPSPTAVPAS 0.15698322903478 0.00272422972588299 0.37 -0.767 16.1306617825803 38.9315347687612 0.37 -0.767 0.0243743937044828 0.000127892925891445 3.0933190683959 -9.66101276555555 Q3KQU3 MAP7D1 Q3KQU3.S116.p_MAP7D1 Q3KQU3_S116s _1_1_116_116 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12207.12207.3 20.14 20.14 1.259 7 1 1 0 1002.5267 2925.6136 S116s TMT10 112 (R) SSQPsPTAVPASDSPPTKQEVK (K) S(0.0)S(0.0)QPS(0.99)PT(0.0)AVPAS(0.0)DS(0.0)PPT(0.0)KQEVK K:TMT10,s:Phosphorylated S MAP7D1 93160.6 4 5 160.1 495.56 HUMAN 1 16.1307 -38.9315 PRRTRSRSPLGFYVH-p Q8IXT5;S280-p PRRTRSRSPLGFYVH 0.781454936409064 0.0192035253059585 -0.074 0.518333333333333 2.05739877239947 23.595810167553 -0.074 0.518333333333333 0.62267312655198 0.00436937161725534 -0.521476218335652 4.69127466008609 Q8IXT5 RBM12B Q8IXT5.S280.p_RBM12B Q8IXT5_S280s _1_1_280_280 Q8IXT5 Q8IXT5|B9ZVT1 RNA-binding protein 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22376.22376.3 17.75 17.75 8.951 2 1 1 0 490.597 1389.8092 S280s Hydrogen 280 (R) sPLGFYVHLK (N) S(0.99)PLGFY(0.0)VHLK K:TMT10-Lys-Only,s:Phosphorylated S RBM12B 118442.9 7 4 384.1 333.8 HUMAN 1 -2.0574 23.5958 PRRVHNNSPDTSRRT-p Q9BRD0;S248-p PRRVHNNSPDTSRRT 0.0732853965819104 0.231541385657383 0.39 0.146333333333333 24.4085661489123 8.36957589060224 0.39 0.146333333333333 0.00362362615011065 0.145560122008424 4.89552754709264 1.69865445744424 Q9BRD0 BUD13 Q9BRD0.S248.p_BUD13 Q9BRD0_S248s _1_1_248_248 Q9BRD0 Q9BRD0 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3083.3083.3 12.98 12.98 4.228 3 1 1 0 531.2575 1511.7876 S248s TMT10 244 (R) VHNNsPDTSRR (T) VHNNS(0.99)PDT(0.0)S(0.0)RR s:Phosphorylated S BUD13 70576.6 25 13 171.1 490.08 HUMAN 1 24.4086 8.3696 PRRVRHDSPDPSPPR-p Q9BRD0;S222-p PRRVRHDSPDPSPPR 0.524824849913072 0.3652549307974 0.0953333333333333 0.122 5.18165762260191 5.79792366539219 0.0953333333333334 0.122 0.30327334243832 0.263152580713495 1.13724600028588 1.24819280835407 Q9BRD0 BUD13 Q9BRD0.S222.p_BUD13 Q9BRD0_S222sS226s_2_2_222_226 Q9BRD0 Q9BRD0 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3292.3292.4 14.73 14.73 99 2 2 2 0 419.6829 1515.7775 S222s S226s Hydrogen 218 (R) VRHDsPDPsPPRR (A) VRHDS(1.0)PDPS(1.0)PPRR s:Phosphorylated S BUD13 70576.6 11 28 171.1 490.08 HUMAN 1 5.1817 5.7979 PRRVRHGTPDPSPRK-p Q9BRD0;T135-p PRRVRHGTPDPSPRK 0.287132448838618 0.00714231278100688 0.180666666666667 0.486 10.2190370562348 30.7245439112023 0.180666666666667 0.486 0.0950815590819623 0.000846341445502743 2.01979168895018 6.64476393301381 Q9BRD0 BUD13 Q9BRD0.T135.p_BUD13 Q9BRD0_T135t _1_1_135_135 Q9BRD0 Q9BRD0|Q9BRD0-2 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3666.3666.3 13.12 7.65 13.117 2 1 1 0 543.9561 1549.8851 T135t TMT10 133 (R) HGtPDPSPRK (D) HGT(0.99)PDPS(0.0)PRK K:TMT10,t:Phosphorylated T BUD13 70576.6 7 4 171.1 490.08 HUMAN 1 10.219 30.7245 PRRWFRESYMEALRN-p A0A1B0GW72;S355-p PRRWFRESYMEALRN 0.168689953351787 0.0716951645225429 0.399 0.201666666666667 15.4254074160404 15.2118253133618 0.399 0.201666666666667 0.0286720838724944 0.030117399421139 2.95862401593549 2.91633832148039 A0A1B0GW72 NotFound A0A1B0GW72.S355.p_NotFound A0A1B0GW72_S355s _1_1_355_355 A0A1B0GW72 A0A1B0GW72 Pleckstrin homology domain-containing family G member 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29768.29768.4 18.71 16.92 1.209 8 1 1 0 1114.2762 4374.1267 S355s TMT10 350 (R) RWFREsYMEALRNPMPLGSSEEALGDLACSSLTGASR (D) RWFRES(0.99)Y(0.0)MEALRNPMPLGS(0.0)S(0.0)EEALGDLACS(0.0)S(0.0)LT(0.0)GAS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PLEKHG4B 181102.6 1 5 1118.1 175.42 HUMAN 1 15.4254 15.2118 PRSDSEESGSEEEEE-p A0A0A0MT49;S724-p PRSDSEESGSEEEEE 0.341280214844005 0.0551895874012082 -0.135 0.288 8.6754733498562 16.7636715662754 -0.135 0.288 0.135660266227531 0.0210684624924584 -1.75218657580738 3.2138252415436 A0A0A0MT49 NotFound A0A0A0MT49.S724.p_NotFound A0A0A0MT49_S724sS726s_2_2_724_726 A0A0A0MT49 A0A0A0MT49|Q9HBD4|P51532|P51532-4 Transcription activator BRG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21799.21799.4 12.52 12.52 2.171 5 2 2 0 1080.7128 4159.8727 S724s S726s TMT10 719 (R) SDSEEsGsEEEEEEEEEEQPQAAQPPTLPVEEK (K) S(0.0)DS(0.0)EES(0.99)GS(0.99)EEEEEEEEEEQPQAAQPPT(0.0)LPVEEK K:TMT10,s:Phosphorylated S SMARCA4 189484.7 1 14 392.1 331.85 HUMAN 1 -8.6755 16.7637 PRSEDEDSLEEAGSP-p Q8TBB5;S418-p PRSEDEDSLEEAGSP 0.112507468607091 0.0554001309863552 0.35 0.503333333333333 19.8171016852503 16.7405118947836 0.35 0.503333333333333 0.0104301326421676 0.0211811146269776 3.83980790629684 3.20930071775349 Q8TBB5 KLHDC4 Q8TBB5.S418.p_KLHDC4 Q8TBB5_S418s _1_1_418_418 Q8TBB5 Q8TBB5|Q8TBB5-3|Q8TBB5-2 Kelch domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10832.10832.2 20.38 20.38 5.903 3 1 1 0 1205.0105 2329.0452 S418s TMT10 413 (R) SEDEDsLEEAGSPAPGPCPR (S) S(0.0)EDEDS(0.99)LEEAGS(0.0)PAPGPCPR C:Carbamidomethylation,s:Phosphorylated S KLHDC4 58289.9 3 3 3120.1 60.27 HUMAN 1 19.8171 16.7405 PRSGGLQTPECLSRE-p P85037;T436-p PRSGGLQTPECLSRE 0.045879533129693 0.713052750806684 0.505333333333333 0.045 29.7409613387263 2.02143087160658 0.505333333333333 0.045 0.00106146057007778 0.627851466282124 6.35369601399973 0.513482993516062 P85037 FOXK1 P85037.T436.p_FOXK1 P85037_T436t _1_1_436_436 P85037 P85037|P85037-2 Forkhead box protein K1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10744.10744.2 13.07 9.91 2.665 3 1 1 0 807.3814 1533.7893 T436t TMT10 431 (R) SGGLQtPECLSR (E) S(0.0)GGLQT(0.99)PECLS(0.0)R C:Carbamidomethylation,t:Phosphorylated T FOXK1 75912.4 2 10 686.1 243.66 HUMAN 1 29.741 2.0214 PRSGRRSSPSPPPSE-p Q9Y5W9;S192-p PRSGRRSSPSPPPSE 0.837648064759586 0.0405973069586793 0.032 0.308 1.48886564593307 18.6537712067554 0.032 0.308 0.70976313010567 0.0136339871180833 0.392376970113918 3.59272893056264 Q9Y5W9 SNX11 Q9Y5W9.S192.p_SNX11 Q9Y5W9_S192s _1_1_192_192 Q9Y5W9 Q9Y5W9|Q9Y5W9-2|B4DJI7 Sorting nexin-11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7197.7197.2 10.62 4.57 1.124 4 1 1 0 840.4185 1599.863 S192s TMT10 191 (R) SsPSPPPSEEK (D) S(0.0)S(0.99)PS(0.0)PPPS(0.0)EEK K:TMT10,s:Phosphorylated S SNX11 30889.3 4 3 2131.1 96.53 HUMAN 1 1.4889 18.6538 PRSGVRGTPVRQRPD-p P33991;T110-p PRSGVRGTPVRQRPD 0.815726627142776 0.00143694595260882 0.0533333333333333 -1.77333333333333 1.69799962841059 45.8580553444201 0.0533333333333334 -1.77333333333333 0.676394452683007 2.59534122698501e-05 0.440832257976524 -13.108334343128 P33991 MCM4 P33991.T110.p_MCM4 P33991_T110t _1_1_110_110 P33991 P33991 DNA replication licensing factor MCM4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3625.3625.3 10.64 7.89 4.524 2 1 1 0 413.2256 1157.6952 T110t TMT10 105 (R) SGVRGtPVR (Q) S(0.0)GVRGT(0.99)PVR t:Phosphorylated T MCM4 97126.8 1 4 1487.1 137.87 HUMAN 1 1.698 -45.8581 PRSISGPSVGVMEMR-p Q8NFH5;S58-p PRSISGPSVGVMEMR 0.620257552175694 0.155558711850649 -0.0713333333333333 -0.198666666666667 3.85566094676883 10.6263663083028 -0.0713333333333333 -0.198666666666667 0.411560707681159 0.086569193027242 -0.889436556662201 -2.08986798410678 Q8NFH5 NUP35 Q8NFH5.S58.p_NUP35 Q8NFH5_S58s _1_1_58_58 Q8NFH5 Q8NFH5|Q8NFH5-2|F8WEL4|F8WCF5 Nucleoporin NUP53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19950.19950.3 9.86 9.86 1.151 3 1 1 0 553.6003 1578.8181 S58s TMT10 53 (R) SISGPsVGVMEMR (S) S(0.0)IS(0.0)GPS(0.99)VGVMEMR s:Phosphorylated S NUP35 34887.3 1 5 627.1 257.69 HUMAN 1 -3.8557 -10.6264 PRSKGQESFKKQEKT-p P06748;S227-p PRSKGQESFKKQEKT 0.947677133293993 0.0759307024001894 -0.0203333333333333 -0.285 0.46342196041382 14.8596577940862 -0.0203333333333333 -0.285 0.898789114599772 0.0326613566943426 -0.13327893779607 -2.85033243344875 P06748 NPM1 P06748.S227.p_NPM1 P06748_S227s _1_1_227_227 P06748 P06748|P06748-2|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8294.8294.3 9.49 9.49 99 1 1 1 0 530.9672 1510.9196 S227s TMT10 224 (K) GQEsFKK (Q) GQES(1.0)FKK K:TMT10,s:Phosphorylated S NPM1 32745.6 4 18 78.1 640.75 HUMAN 1 -0.4634 -14.8597 PRSKRNRSPHHSTVK-p Q8TAD8;S99-p PRSKRNRSPHHSTVK 0.136948588581255 0.511930737612097 1.24866666666667 0.189666666666667 17.7154117286383 3.90036603006917 1.24866666666667 0.189666666666667 0.0169222780682843 0.407345944614561 3.40489743332261 0.897886631945252 Q8TAD8 SNIP1 Q8TAD8.S99.p_SNIP1 Q8TAD8_S99s _1_1_99_99 Q8TAD8 Q8TAD8|A0A1W2PRA0 Smad nuclear-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.2825.2825.4 8.1 8.1 2.116 3 1 1 0 425.9802 1620.9334 S99s TMT10 97 (R) NRsPHHSTVK (V) NRS(0.99)PHHS(0.0)T(0.0)VK K:TMT10,s:Phosphorylated S SNIP1 45833.8 1 4 1038.1 185.39 HUMAN 1 17.7154 3.9004 PRSKTPSSPCPASKV-p Q9NQS7;S481-p PRSKTPSSPCPASKV 0.391150856817222 0.000952253650599092 0.144 -1.504 7.52897365860049 54.1332776719904 0.144 -1.504 0.176645522684631 3.86075491319378e-06 1.55332582224292 -18.7557067798634 Q9NQS7 INCENP Q9NQS7.S481.p_INCENP Q9NQS7_S481s _1_1_481_481 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7384.7384.4 9.03 9.03 1.319 5 1 1 0 504.2721 1934.0984 S481s TMT10 476 (R) SKTPSsPCPASK (V) S(0.0)KT(0.0)PS(0.0)S(0.99)PCPAS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S INCENP 105826.3 9 19 138.1 524.38 HUMAN 1 7.529 -54.1333 PRSLSCLSDLDGGVA-p O95685;S28-p PRSLSCLSDLDGGVA 0.936822382599764 0.112300247886504 0.0126666666666667 -0.169 0.551010908894959 12.5282742033283 0.0126666666666667 -0.169 0.880843814797947 0.0558692163370361 0.157123577034757 -2.42512842295212 O95685 PPP1R3D O95685.S28.p_PPP1R3D O95685_S28s _1_1_28_28 O95685 O95685 Protein phosphatase 1 regulatory subunit 3D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26280.26280.3 19.94 19.94 4.08 3 1 1 0 700.0087 2018.0426 S28s TMT10 23 (R) SLSCLsDLDGGVALEPR (A) S(0.0)LS(0.0)CLS(0.99)DLDGGVALEPR C:Carbamidomethylation,s:Phosphorylated S PPP1R3D 33300.2 3 2 2020.1 102.1 HUMAN 1 0.551 -12.5283 PRSPGYESESSRYES-p Q9H5H4;S144-p PRSPGYESESSRYES 0.823567086658555 0.00369002570624909 -0.047 1.14033333333333 1.62520306063639 36.1145600971455 -0.047 1.14033333333333 0.687827751180355 0.00024464930721497 -0.424102283427276 8.51371454897505 Q9H5H4 ZNF768 Q9H5H4.S144.p_ZNF768 Q9H5H4_S144s _1_1_144_144 Q9H5H4 Q9H5H4|H3BS42 Zinc finger protein 768 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11594.11594.3 16.09 10.2 1.167 8 1 1 0 910.4276 2649.3044 S144s TMT10 139 (R) SPGYEsESSRYESQNTELK (T) S(0.0)PGY(0.0)ES(0.99)ES(0.0)S(0.0)RY(0.0)ES(0.0)QNT(0.0)ELK K:TMT10,s:Phosphorylated S ZNF768 61482.8 2 138 240.2 415.72 HUMAN 1 -1.6252 36.1146 PRSPLAPSEGAGSDV-p P04626;S1078-p PRSPLAPSEGAGSDV 0.0511487796737011 0.0449204954360677 -0.470333333333333 -0.353666666666667 28.3393833964873 18.034951640915 -0.470333333333333 -0.353666666666667 0.0014657559315805 0.0157218929883611 -5.94236247054207 -3.46649739525914 P04626 ERBB2 P04626.S1078.p_ERBB2 P04626_S1078sS1083s_2_2_1078_1083 P04626 P04626|P04626-4|P04626-5|B4DTR1|P04626-2|P04626-3 Receptor tyrosine-protein kinase erbB-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29834.29834.3 17.42 17.42 5.172 3 2 2 0 956.4301 2707.3649 S1078s S1083s TMT10 1073 (R) SPLAPsEGAGsDVFDGDLGMGAAK (G) S(0.0)PLAPS(0.99)EGAGS(0.99)DVFDGDLGMGAAK K:TMT10,s:Phosphorylated S ERBB2 141274.2 2 27 521.1 283.33 HUMAN 1 -28.3394 -18.035 PRSPPPRSPPPRSPP-p Q96HA1;S179-p PRSPPPRSPPPRSPP 0.862721178211236 0.150889625854059 0.0256666666666666 0.146 1.25161134684984 10.8031955726504 0.0256666666666667 0.146 0.749616030449907 0.0831151977945121 0.335853807006918 2.12072899968478 Q96HA1 POM121 Q96HA1.S179.p_POM121 Q96HA1_S179s _1_1_179_179 Q96HA1 Q96HA1 Nuclear envelope pore membrane protein POM 121 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3837.3837.3 7.16 7.16 7.156 2 1 1 0 466.2487 1316.7636 S179s TMT10 174 (R) SPPPRsPPPR (S) S(0.0)PPPRS(0.99)PPPR s:Phosphorylated S POM121 128174.4 2 42 133.1 532.02 HUMAN 1 1.2516 10.8032 PRSPPPRSPPPSPPT-p Q96HA1;S184-p PRSPPPRSPPPSPPT 0.412972933372221 0.0246170893499141 0.150666666666667 0.342 7.08573439720483 21.8953846804311 0.150666666666667 0.342 0.195625993405017 0.00646340741223556 1.47601237925587 4.29353490528744 Q96HA1 POM121 Q96HA1.S184.p_POM121 Q96HA1_S184s _1_1_184_184 Q96HA1 Q96HA1 Nuclear envelope pore membrane protein POM 121 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4161.4161.4 11.15 11.15 2.431 4 1 1 0 479.7492 1836.0078 S184s TMT10 179 (R) SPPPRsPPPSPPTHR (A) S(0.0)PPPRS(0.99)PPPS(0.0)PPT(0.0)HR s:Phosphorylated S POM121 128174.4 3 43 133.1 532.02 HUMAN 1 7.0857 21.8954 PRSPRQNSIGNTPSG-p Q99700;S697-p PRSPRQNSIGNTPSG 0.321222707301697 0.33161504228324 0.155333333333333 0.0996666666666667 9.2366751333811 6.35076646089247 0.155333333333333 0.0996666666666667 0.119215434688076 0.231698570264818 1.84934048656172 1.34647973589738 Q99700 ATXN2 Q99700.S697.p_ATXN2 Q99700_S697s _1_1_697_697 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31968.31968.4 15.63 15.63 1.903 9 1 1 0 1136.8297 4464.3394 S697s TMT10 695 (R) QNsIGNTPSGPVLASPQAGIIPTEAVAMPIPAASPTPASPASNR (A) Q(0.0)N(0.0)S(0.99)IGN(0.0)T(0.0)PS(0.0)GPVLAS(0.0)PQAGIIPT(0.0)EAVAM(0.0)PIPAAS(0.0)PT(0.0)PAS(0.0)PAS(0.0)N(0.0)R s:Phosphorylated S ATXN2 140907.9 5 11 176.1 481.52 HUMAN 1 9.2367 6.3508 PRSPRRMSFSGIFRS-p Q9UGJ0-3;S78-p PRSPRRMSFSGIFRS 0.122554525096102 0.00382781228923629 -0.621666666666667 0.835333333333333 18.9823812138348 35.8082785764459 -0.621666666666667 0.835333333333333 0.0126404308924662 0.000262525891741704 -3.66388165654744 8.39658141904436 Q9UGJ0 PRKAG2 Q9UGJ0.3.S78.p_PRKAG2 Q9UGJ0-3_S78s _1_1_78_78 Q9UGJ0-3 Q9UGJ0|Q9UGJ0-3|F8WDA1 Isoform C of 5'-AMP-activated protein kinase subunit gamma-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21438.21438.3 12.18 12.18 2.246 2 1 1 0 470.57 1329.7299 S78s TMT10 76 (R) RMsFSGIFR (S) RMS(0.99)FS(0.0)GIFR s:Phosphorylated S PRKAG2 58609 1 4 2725.1 72.63 HUMAN 1 -18.9824 35.8083 PRSQRYESLKGVDPK-p P47914;S31-p PRSQRYESLKGVDPK 0.0952138994402959 0.137110954994866 0.542666666666667 -0.272333333333333 21.6630869314989 11.3703075273052 0.542666666666667 -0.272333333333333 0.006818538654159 0.0729405858628894 4.24530818134102 -2.22007591473975 P47914 RPL29 P47914.S31.p_RPL29 P47914_S31s _1_1_31_31 P47914 P47914 60S ribosomal protein L29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15643.15643.3 12.15 6.95 8.032 2 1 1 0 635.0236 1823.0882 S31s TMT10 29 (R) YEsLKGVDPK (F) Y(0.0)ES(0.99)LKGVDPK K:TMT10,s:Phosphorylated S RPL29 17808.8 3 1 2966.1 64.48 HUMAN 1 21.6631 -11.3703 PRSQVRPSDGPSQIA-p K7EKI0;S799-p PRSQVRPSDGPSQIA 0.468065510489932 0.00453758598240386 -0.137333333333333 -0.603 6.08829508212902 34.3700547690499 -0.137333333333333 -0.603 0.24613336648151 0.000365590181111735 -1.30027738004387 -7.86516441094308 K7EKI0 EVPL K7EKI0.S799.p_EVPL K7EKI0_S799s _1_1_799_799 K7EKI0 K7EKI0|Q92817 Envoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11872.11872.3 11.78 7.44 2.336 4 1 1 0 724.3807 2091.1599 S799s TMT10 794 (R) SQVRPsDGPSQIAYK (L) S(0.0)QVRPS(0.99)DGPS(0.0)QIAY(0.0)K K:TMT10,s:Phosphorylated S EVPL 235195.7 1 4 1436.1 142.57 HUMAN 1 -6.0883 -34.3701 PRSRDPHYDDFRSRE-p Q86X29;Y551-p PRSRDPHYDDFRSRE 0.593161151609383 0.705822696083735 0.167666666666667 -0.138666666666667 4.18363650693429 2.07819375332745 0.167666666666667 -0.138666666666666 0.381624588757243 0.619698756472536 0.952073120468809 -0.525987849481322 Q86X29 LSR Q86X29.Y551.p_LSR Q86X29_Y551y _1_1_551_551 Q86X29 Q86X29|Q86X29-4|Q86X29-3|S4R3V8|Q86X29-2|Q86X29-5|Q86X29-6 Lipolysis-stimulated lipoprotein receptor GG20160819_MSz_CCLE_T4D7_pY_Injection_02.5326.5326.3 16.56 7.34 8.656 2 1 1 0 539.5736 1536.7393 Y551y TMT10 546 (R) SRDPHyDDFR (S) S(0.0)RDPHY(0.99)DDFR y:Phosphorylated Y LSR 72578.7 1 2 113.1 26.21 HUMAN 1 4.1836 -2.0782 PRSRSRDSGDENEPI-p Q8WX93;S1121-p PRSRSRDSGDENEPI 0.512436496519705 0.00494938312222238 0.0993333333333333 0.545333333333333 5.36668008930784 33.6231401786277 0.0993333333333334 0.545333333333333 0.29062434475462 0.000434196163870522 1.17084985255572 7.60083538564394 Q8WX93 PALLD Q8WX93.S1121.p_PALLD Q8WX93_S1121s _1_1_1121_1121 Q8WX93 Q8WX93|Q8WX93-5|Q8WX93-9|Q8WX93-2|Q8WX93-3|Q8WX93-8 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4376.4376.2 12.81 12.81 3.522 2 1 1 0 970.9333 1860.8885 S1121s TMT10 1118 (R) SRDsGDENEPIQER (F) S(0.0)RDS(0.99)GDENEPIQER s:Phosphorylated S PALLD 151930.4 2 13 338.1 354.43 HUMAN 1 5.3667 33.6231 PRSTCAPSPQREVLT-p O95359;S1635-p PRSTCAPSPQREVLT 0.682958202515231 0.0200534677975733 0.0973333333333333 -0.318 3.10463535946805 23.265746377369 0.0973333333333334 -0.318 0.489256342148062 0.00471438843016737 0.741585957827489 -4.61228907074561 O95359 TACC2 O95359.S1635.p_TACC2 O95359_S1635s _1_1_1635_1635 O95359 O95359|E9PBC6|O95359-3|E7EMZ9 Transforming acidic coiled-coil-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25682.25682.4 17.77 15.59 1.174 7 1 1 0 927.4481 3626.7958 S1635s TMT10 1630 (R) STCAPsPQREVLTVPEANSEPWTLDTLGGER (R) S(0.0)T(0.0)CAPS(0.99)PQREVLT(0.0)VPEANS(0.0)EPWT(0.0)LDT(0.0)LGGER C:Carbamidomethylation,s:Phosphorylated S TACC2 311818.1 3 11 101.1 597.93 HUMAN 1 3.1046 -23.2657 PRSVRIPSPNILKTG-p Q5VUA4;S2101-p PRSVRIPSPNILKTG 0.861433296002184 0.233549208445351 0.0253333333333333 0.119 1.26587196787311 8.31744047106636 0.0253333333333333 0.119 0.747158606103093 0.147318047043413 0.339301347192854 1.68962998071545 Q5VUA4 ZNF318 Q5VUA4.S2101.p_ZNF318 Q5VUA4_S2101s _1_1_2101_2101 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21181.21181.3 10.7 7.08 4.331 2 1 1 0 588.0178 1682.0729 S2101s TMT10 2096 (R) SVRIPsPNILK (T) S(0.0)VRIPS(0.99)PNILK K:TMT10,s:Phosphorylated S ZNF318 252762.4 13 35 37.1 870.88 HUMAN 1 1.2659 8.3174 PRTFLRPSPEDEAIY-p A0A1B0GTW1;S558-p PRTFLRPSPEDEAIY 0.358160899463675 0.080340098862138 -0.176666666666667 -0.198666666666667 8.28479937397652 14.5304514136387 -0.176666666666667 -0.200129935393111 0.148429444672309 0.03523342468722 -1.68453304674596 -2.78909149910222 A0A1B0GTW1 NotFound A0A1B0GTW1.S558.p_NotFound A0A1B0GTW1_S558s _1_1_558_558 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20355.20355.3 12.72 12.72 1.648 4 1 1 0 858.4404 2493.339 S558s TMT10 553 (R) TFLRPsPEDEAIYGPNTK (M) T(0.0)FLRPS(0.99)PEDEAIY(0.0)GPNT(0.0)K K:TMT10,s:Phosphorylated S TJP2 141123.7 2 17 41.1 827.72 HUMAN 1 -8.2848 -14.5305 PRTKTVLSLFDEEED-p Q641Q2;S802-p PRTKTVLSLFDEEED 0.909190676386736 0.221763078290363 -0.0183333333333333 -0.142 0.811161143166743 8.61368812553172 -0.0183333333333333 -0.142 0.829628925702594 0.137604040838541 -0.225815501724325 -1.74089341635997 Q641Q2 FAM21A Q641Q2.S802.p_FAM21A Q641Q2_S802s _1_1_802_802 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2|Q9Y4E1-4|Q9Y4E1-2|E7ESD2|Q9Y4E1-6|Q9Y4E1-3|J3KP36|F8W7U3|A0A087WYF6|Q9Y4E1-5 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.34020.34020.4 22.03 17.9 3.202 2 1 1 0 897.7106 3507.8496 S802s TMT10 799 (K) TVLsLFDEEEDKMEDQNIIQAPQK (E) T(0.0)VLS(0.99)LFDEEEDKMEDQNIIQAPQK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 33 46 12.1 1178.3 HUMAN 1 -0.8112 -8.6137 PRTPLSPSPMKTPPA-p Q69YQ0;S870-p PRTPLSPSPMKTPPA 0.350553974320356 0.00259997565261951 0.151333333333333 -0.752333333333333 8.45562966614659 39.394571101236 0.151333333333333 -0.752333333333333 0.14270429139381 0.000114958976852909 1.71412319449006 -9.86235185606314 Q69YQ0 SPECC1L Q69YQ0.S870.p_SPECC1L Q69YQ0_S870s _1_1_870_870 Q69YQ0 Q69YQ0|Q69YQ0-2 Cytospin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19326.19326.3 11.83 7.26 1.354 5 1 1 0 901.4795 2622.4512 S870s TMT10 865 (R) TPLSPsPMKTPPAAAVSPMQR (H) T(0.0)PLS(0.0)PS(0.99)PMKT(0.0)PPAAAVS(0.0)PMQR K:TMT10,s:Phosphorylated S SPECC1L 124999.2 11 7 1013.1 188.73 HUMAN 1 8.4556 -39.3946 PRTRRGPSPPASPTR-p Q6P5Z2;S544-p PRTRRGPSPPASPTR 0.295125154480667 0.842003960988428 0.399333333333333 0.043 9.99223527116037 1.049990862782 0.399333333333333 0.043 0.100178949412474 0.78523728668649 1.98036148248395 0.286343128054472 Q6P5Z2 PKN3 Q6P5Z2.S544.p_PKN3 Q6P5Z2_S544s _1_1_544_544 Q6P5Z2 Q6P5Z2 Serine/threonine-protein kinase N3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4459.4459.3 8.22 8.22 3.6 3 1 1 0 477.9146 1351.7644 S544s TMT10 541 (R) RGPsPPASPTR (K) RGPS(0.99)PPAS(0.0)PT(0.0)R s:Phosphorylated S PKN3 100502.9 1 4 1941.1 106.04 HUMAN 1 9.9922 1.05 PRTRTLLSDPTYREL-p P31948-2;S195-p PRTRTLLSDPTYREL 0.232074306619166 0.273260859753288 -0.176 0.121666666666667 12.2018710971054 7.42160647422336 -0.176 0.121666666666667 0.0602300037609745 0.181067019392894 -2.36819288455404 1.53418010415451 P31948 STIP1 P31948.2.S195.p_STIP1 P31948-2_S195s _1_1_195_195 P31948-2 P31948-2 Isoform 2 of Stress-induced-phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31630.31630.3 15.48 9.85 3.101 4 1 1 0 752.7324 2176.2175 S195s TMT10 192 (R) TLLsDPTYRELIEQLR (N) T(0.0)LLS(0.99)DPT(0.0)Y(0.0)RELIEQLR s:Phosphorylated S STIP1 68763.9 1 2 1370.1 149.31 HUMAN 1 -12.2019 7.4216 PRTSPCQSPTISEGP-p J3KQV8;S1092-p PRTSPCQSPTISEGP 0.64009150118223 0.833640132303207 0.0863333333333333 0.0373333333333334 3.62012616843436 1.10693355442867 0.0863333333333333 0.0373333333333333 0.434497601243887 0.775008819156908 0.843782228608938 0.300460565867316 J3KQV8 SYNJ1 J3KQV8.S1092.p_SYNJ1 J3KQV8_S1092s _1_1_1092_1092 J3KQV8 J3KQV8|O43426|A0A0D9SGJ6|C9JFZ1|O43426-2|O43426-4|J3KPK1 Synaptojanin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20144.20144.3 12 7.95 11.594 7 1 1 0 924.8055 2692.429 S1092s TMT10 1087 (R) TSPCQsPTISEGPVPSLPIRPSR (A) T(0.0)S(0.0)PCQS(0.99)PT(0.0)IS(0.0)EGPVPS(0.0)LPIRPS(0.0)R C:Carbamidomethylation,s:Phosphorylated S SYNJ1 178858.1 1 2 677.1 246.73 HUMAN 1 3.6201 1.1069 PRTSTNFSPMRPQQP-p Q92576;S1796-p PRTSTNFSPMRPQQP 0.3851629764389 0.00203605351766751 0.211666666666667 -0.781 7.67092294260349 41.9632001181681 0.211666666666667 -0.781 0.170965194913383 6.36326468134655e-05 1.5780169814643 -11.050617990866 Q92576 PHF3 Q92576.S1796.p_PHF3 Q92576_S1796s _1_1_1796_1796 Q92576 Q92576|Q92576-2 PHD finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15881.15881.4 11.74 9.42 1.178 4 1 1 0 691.3591 2682.455 S1796s TMT10 1791 (R) TSTNFsPMRPQQPNLQHLK (S) T(0.0)S(0.0)T(0.0)NFS(0.99)PMRPQQPNLQHLK K:TMT10,s:Phosphorylated S PHF3 231702.4 1 16 96.1 606.54 HUMAN 1 7.6709 -41.9632 PRTVIRGSQAELKCP-p Q9P0P0;S70-p PRTVIRGSQAELKCP 0.143638422086766 0.0656874418996618 -0.563666666666667 -0.261666666666667 17.2083604360016 15.734476972385 -0.563666666666667 -0.261666666666667 0.0190179611725925 0.0267025233041698 -3.30378649122662 -3.01528458395662 Q9P0P0 RNF181 Q9P0P0.S70.p_RNF181 Q9P0P0_S70s _1_1_70_70 Q9P0P0 Q9P0P0|C9J1C6 E3 ubiquitin-protein ligase RNF181 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11611.11611.3 10.5 10.5 3.471 2 1 1 0 580.6656 1660.0158 S70s TMT10 65 (R) TVIRGsQAELK (C) T(0.0)VIRGS(0.99)QAELK K:TMT10,s:Phosphorylated S RNF181 18308.2 1 2 3520.1 49.15 HUMAN 1 -17.2084 -15.7345 PRTWPHRSPSRGSSS-p Q8TB22-2;S39-p PRTWPHRSPSRGSSS 0.367571861538115 0.0679657356249928 -0.447 0.475333333333333 8.06703161459798 15.5351293885274 -0.447 0.475333333333333 0.15606188150894 0.0279567743525502 -1.64678685064934 2.97740217094669 Q8TB22 SPATA20 Q8TB22.2.S39.p_SPATA20 Q8TB22-2_S39s _1_1_39_39 Q8TB22-2 Q8TB22-2|D6RIU6|D6RC70 Isoform 2 of Spermatogenesis-associated protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.4501.4501.4 8.53 8.53 8.533 3 1 1 0 358.9313 1352.7385 S39s TMT10 34 (R) TWPHRsPSR (G) T(0.0)WPHRS(0.99)PS(0.0)R s:Phosphorylated S SPATA20 90597 1 1 6951.1 8.53 HUMAN 1 -8.067 15.5351 PRTYDRRYWCDAEYD-p J3KNL6;Y1291-p PRTYDRRYWCDAEYD 0.533414361833547 0.962872227289093 -0.127666666666667 -0.00699999999999997 5.05297902792883 0.234672534970179 -0.127666666666667 -0.00507945979654095 0.312393577910684 0.947398617191828 -1.11375799840935 -0.0690845664431755 J3KNL6 SEC16A J3KNL6.Y1291.p_SEC16A J3KNL6_Y1291y _1_1_1291_1291 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16051.16098.3 17.68 17.68 11.924 3 1 1 0 659.6165 1896.8536 Y1291y TMT10 1291 (R) yWCDAEYDAYRR (E) Y(0.99)WCDAEY(0.0)DAY(0.0)RR C:Carbamidomethylation,y:Phosphorylated Y SEC16A 253486.5 2 4 27.1 67.84 HUMAN 1 -5.053 -0.2347 PRVHRPRSPILEEKD-p Q12830;S216-p PRVHRPRSPILEEKD 0.681903802364484 0.643100715776169 -0.104 0.0873333333333333 3.11917266729544 2.61317646170478 -0.104 0.0873333333333333 0.487621373320309 0.547876097742476 -0.744515392649388 0.640602591410325 Q12830 BPTF Q12830.S216.p_BPTF Q12830_S216s _1_1_216_216 Q12830 Q12830|Q12830-2|Q12830-4|A0A0A0MR81 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27016.27016.3 18.89 17.23 99 1 1 1 0 797.4363 2310.3361 S216s Hydrogen 216 (R) sPILEEKDIPPLEFPK (S) S(1.0)PILEEKDIPPLEFPK K:TMT10-Lys-Only,s:Phosphorylated S BPTF 340995.1 12 1 94.1 610.41 HUMAN 1 -3.1192 2.6132 PRVKESRSPAKEEAA-p Q9HCM7;S830-p PRVKESRSPAKEEAA 0.0514169831137918 0.779416146863779 -0.683 -0.0303333333333333 28.2272799943402 1.49958061250861 -0.683 -0.0303333333333333 0.00150408368546087 0.708014152266994 -5.91038374677124 -0.394847482913236 Q9HCM7 FBRSL1 Q9HCM7.S830.p_FBRSL1 Q9HCM7_S830s _1_1_830_830 Q9HCM7 Q9HCM7 Fibrosin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4554.4554.4 13.06 8.95 1.292 2 1 1 0 518.2863 1990.1536 S830s TMT10 827 (K) ESRsPAKEEAAK (M) ES(0.0)RS(0.99)PAKEEAAK K:TMT10,s:Phosphorylated S FBRSL1 111247 2 7 716.1 237.81 HUMAN 1 -28.2273 -1.4996 PRVKRQDSMEALQMD-p Q8TDR0-2;S410-p PRVKRQDSMEALQMD 0.176240941475 0.0685654729305212 0.530666666666667 -0.309666666666667 14.9753279458008 15.4824990827966 0.530666666666667 -0.309666666666667 0.031802935279474 0.0282976318220475 2.87382518724383 -2.96743040054254 Q8TDR0 TRAF3IP1 Q8TDR0.2.S410.p_TRAF3IP1 Q8TDR0-2_S410s _1_1_410_410 Q8TDR0-2 Q8TDR0|Q8TDR0-2 Isoform 2 of TRAF3-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9941.9941.3 15.59 15.59 99 1 1 1 0 596.937 1708.8308 S410s TMT10 407 (K) RQDsMEALQMDR (S) RQDS(1.0)MEALQMDR s:Phosphorylated S TRAF3IP1 71813.2 7 2 2201.1 93.61 HUMAN 1 14.9753 -15.4825 PRVRRASSKGGGGYT-p P15924;S166-p PRVRRASSKGGGGYT 0.0161021557211754 0.00112205987963851 -1.01566666666667 -1.20833333333333 42.1966338357099 49.3196933950143 -1.01566666666667 -1.20833333333333 6.03026803805669e-05 1.16958195872834e-05 -11.1926442339764 -15.2367202124934 P15924 DSP P15924.S166.p_DSP P15924_S165sS166s_2_2_165_166 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20192.20192.4 11.74 11.74 1.117 7 2 2 0 779.351 2954.4557 S165s S166s TMT10 164 (R) AssKGGGGYTCQSGSGWDEFTK (H) AS(0.99)S(0.99)KGGGGY(0.0)T(0.0)CQS(0.0)GS(0.0)GWDEFT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DSP 334221.3 10 26 104.1 590.4 HUMAN 1 -42.1966 -49.3197 PRVSPAHSPPENGLD-p H0YL70;S277-p PRVSPAHSPPENGLD 0.806340238065947 0.0340993601540337 -0.0573333333333333 -0.274333333333333 1.80131069788288 19.7705910917067 -0.0573333333333333 -0.274333333333333 0.660494081246505 0.0105424339999299 -0.464336998872641 -3.82636063443406 H0YL70 TLE3 H0YL70.S277.p_TLE3 H0YL70_S277s _1_1_277_277 H0YL70 H0YL70|H0YKN8 Transducin-like enhancer protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10125.10125.3 13.71 12.27 4.515 2 1 1 0 662.6748 1906.0434 S277s TMT10 272 (R) VSPAHsPPENGLDK (A) VS(0.0)PAHS(0.99)PPENGLDK K:TMT10,s:Phosphorylated S TLE3 85275.2 1 4 447.1 309.48 HUMAN 1 -1.8013 -19.7706 PRVSPPASPGP____-p Q9Y4U1;S279-p PRVSPPASPGP____ 0.207422631751664 0.00829912119026097 -0.235666666666667 -0.625 13.1880972006 29.5889947323522 -0.235666666666667 -0.625 0.0479943683064861 0.00109926025732989 -2.54501692752602 -6.29823898108708 Q9Y4U1 MMACHC Q9Y4U1.S279.p_MMACHC Q9Y4U1_S279s _1_1_279_279 Q9Y4U1 Q9Y4U1|A0A0C4DGU2 Methylmalonic aciduria and homocystinuria type C protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22562.22562.3 13.33 13.33 2.124 4 1 1 0 615.3163 1763.9642 S279s TMT10 268 (R) SWLSPRVSPPAsPGP (-) S(0.0)WLS(0.0)PRVS(0.0)PPAS(0.99)PGP s:Phosphorylated S MMACHC 32013.1 2 4 3383.1 52.31 HUMAN 1 -13.1881 -29.589 PRVTRAKYFIRDEFL-p Q5JWF2;Y982-p PRVTRAKYFIRDEFL 0.581677715133505 0.350537128992444 -0.127333333333333 0.132333333333333 4.33037039990881 6.0354702788369 -0.127333333333333 0.132333333333333 0.368946130649967 0.249145456773453 -0.979776539636176 1.29057115694382 Q5JWF2 GNAS Q5JWF2.Y982.p_GNAS Q5JWF2_Y982y _1_1_982_982 Q5JWF2 Q5JWF2|Q5JWF2-2|P63092-4 Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas GG20160819_MSz_CCLE_T4D7_pY_Injection_01.24313.24313.3 16.6 9.11 99 1 1 1 0 523.2675 1487.8208 Y982y TMT10 982 (K) yFIRDEFLR (I) Y(1.0)FIRDEFLR y:Phosphorylated Y GNAS 111764.2 1 1 215.1 16.6 HUMAN 1 -4.3304 6.0355 PRVVNRMSRFQKSAG-p Q9H6U6;S456-p PRVVNRMSRFQKSAG 0.0142975502007577 0.205989806391503 -0.980666666666667 -0.212333333333333 44.4892264244135 9.02983534547316 -0.980666666666667 -0.212333333333333 3.55694670101227e-05 0.125030643231931 -12.3802029633256 -1.81287324264687 Q9H6U6 BCAS3 Q9H6U6.S456.p_BCAS3 Q9H6U6_S456s _1_1_456_456 Q9H6U6 Q9H6U6-8|Q9H6U6-3|Q9H6U6-7|Q9H6U6-2|K7ESE9|Q9H6U6-6 Breast carcinoma-amplified sequence 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10197.10197.4 7.37 7.37 99 1 1 1 0 451.5017 1723.0202 S456s TMT10 451 (R) VVNRMsRFQK (S) VVNRMS(1.0)RFQK K:TMT10,s:Phosphorylated S BCAS3 102547.1 3 1 847.1 212.9 HUMAN 1 -44.4892 -9.0298 PRWDSCDSLNGLDPS-p Q8TE68;S583-p PRWDSCDSLNGLDPS 0.181080338359562 0.163249111456834 -0.24 -0.147666666666667 14.6270503591596 10.3488917057689 -0.24 -0.147666666666667 0.0344583885755639 0.0922806892054672 -2.80879241391356 -2.04153719123943 Q8TE68 EPS8L1 Q8TE68.S583.p_EPS8L1 Q8TE68_S583s_1_1_583_583 Q8TE68 Q8TE68|B4DKV7|Q8TE68-2|Q8TE68-4|K7ELW3 Epidermal growth factor receptor kinase substrate 8-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22795.22795.3 15.3 15.3 3.483 3 1 1 0 754.6737 2181.0534 S583s N585n TMT10 578 (R) WDSCDsLnGLDPSEK (E) WDS(0.0)CDS(0.99)LN(1.0)GLDPS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated EPS8L1 80534.9 8 12 326.1 361.27 HUMAN 1 -14.6271 -10.3489 PRYHELPTLEERSGP-p Q92692;T459-p PRYHELPTLEERSGP 0.676143709786253 0.394337749033294 0.0566666666666667 -0.115666666666667 3.18390190854266 5.37164062420108 0.0566666666666667 -0.115666666666667 0.480407533480371 0.290292581574345 0.757523624074194 -1.17149620708082 Q92692 PVRL2 Q92692.T459.p_PVRL2 Q92692_T459t _1_1_459_459 Q92692 Q92692 Nectin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10108.10108.3 11.79 11.79 7.598 2 1 1 0 456.2063 1286.6375 T459t Hydrogen 454 (R) YHELPtLEER (S) Y(0.0)HELPT(0.99)LEER t:Phosphorylated T NECTIN2 58197.4 2 4 1687.1 120.88 HUMAN 1 3.1839 -5.3716 PRYRARGSPHFQHAE-p Q9Y2J4-4;S294-p PRYRARGSPHFQHAE 0.970473389050183 0.11269709954962 -0.00900000000000001 0.184666666666667 0.257054323366185 12.5040239361445 -0.00900000000000004 0.184666666666667 0.942528665963352 0.0561820531651296 -0.0755012838492411 2.42079881624235 Q9Y2J4 AMOTL2 Q9Y2J4.4.S294.p_AMOTL2 Q9Y2J4-4_S294s _1_1_294_294 Q9Y2J4-4 Q9Y2J4-4|Q9Y2J4-2|Q9Y2J4-3 Isoform 4 of Angiomotin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4034.4034.3 16.7 16.7 99 1 1 1 0 448.8668 1264.6181 S294s Hydrogen 293 (R) GsPHFQHAEVR (I) GS(1.0)PHFQHAEVR s:Phosphorylated S AMOTL2 92272.2 2 5 849.1 212.62 HUMAN 1 -0.2571 12.504 PRYSHSGSSSPDTKV-p Q9UQ35;S972-p PRYSHSGSSSPDTKV 0.0700237545877012 0.0917987666168442 0.508333333333333 0.271 24.9100476154172 13.7171596049641 0.508333333333333 0.271 0.00322845872516532 0.0424897366645529 5.02103062072449 2.63958896505094 Q9UQ35 SRRM2 Q9UQ35.S972.p_SRRM2 Q9UQ35_S972sS973sS974s_3_3_972_974 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7430.7430.3 10.18 10.18 5.164 7 3 3 0 650.9287 1710.8699 S972s S973s S974s TMT10 967 (R) YSHSGsssPDTK (V) Y(0.0)S(0.0)HS(0.0)GS(0.99)S(0.99)S(0.99)PDT(0.0)K K:TMT10,s:Phosphorylated S SRRM2 300351.7 5 258 2.1 3310.34 HUMAN 1 24.91 13.7172 PSAAASASASAAASS-p Q13263;S43-p PSAAASASASAAASS 0.327394528659194 0.564962110045941 0.139333333333333 0.0593333333333333 9.0730690994767 3.34338339583803 0.139333333333333 0.0593333333333334 0.123792145524891 0.463086009383031 1.82101238074155 0.789216353518904 Q13263 TRIM28 Q13263.S43.p_TRIM28 Q13263_S43s _1_1_43_43 Q13263 Q13263|Q13263-2 Transcription intermediary factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25522.25522.4 9.15 7.86 1.236 8 1 1 0 938.6821 3671.7591 S43s TMT10 33 (R) STAPSAAASAsASAAASSPAGGGAEALELLEHCGVCR (E) S(0.0)T(0.0)APS(0.0)AAAS(0.0)AS(0.99)AS(0.0)AAAS(0.0)S(0.0)PAGGGAEALELLEHCGVCR C:Carbamidomethylation,s:Phosphorylated S TRIM28 90316.8 74 2 118.1 555.36 HUMAN 1 9.0731 3.3434 PSAAKPPSPEKTAPV-p Q7Z3K3;S425-p PSAAKPPSPEKTAPV 0.74843463214063 0.217518591551834 -0.0656666666666667 0.146 2.39182698416511 8.71805413971424 -0.0656666666666667 0.146 0.576523881083028 0.134336672297192 -0.593926923446564 1.75894648461433 Q7Z3K3 POGZ Q7Z3K3.S425.p_POGZ Q7Z3K3_S425s _1_1_425_425 Q7Z3K3 Q7Z3K3|Q7Z3K3-6|Q7Z3K3-3|Q7Z3K3-2|Q7Z3K3-7|Q7Z3K3-5 Pogo transposable element with ZNF domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15230.15230.2 20.61 20.61 2.935 5 1 1 0 1345.7179 2610.4594 S425s TMT10 410 (K) SLDSEPSVPSAAKPPsPEK (T) S(0.0)LDS(0.0)EPS(0.0)VPS(0.0)AAKPPS(0.99)PEK K:TMT10,s:Phosphorylated S POGZ 157451.9 7 5 811.1 221.02 HUMAN 1 -2.3918 8.7181 PSAANPCSPVQFSST-p F8VU39;S1368-p PSAANPCSPVQFSST 0.358160899463675 0.0768435887958061 -0.19 0.362333333333333 8.2858910973452 14.7851251051139 -0.19 0.362333333333333 0.148392137376309 0.0332267213612063 -1.68472219711978 2.83642906547205 F8VU39 BAZ2A F8VU39.S1368.p_BAZ2A F8VU39_S1368s _1_1_1368_1368 F8VU39 Q9UIF9|F8VU39|Q9UIF9-3|Q9UIF9-2|J3KPG5 Bromodomain adjacent to zinc finger domain protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24274.24274.4 13.31 9.72 2.308 5 1 1 0 834.1785 3253.7226 S1368s TMT10 1357 (K) PMNRPSAANPCsPVQFSSTPLAGLAPK (R) PMNRPS(0.0)AANPCS(0.99)PVQFS(0.0)S(0.0)T(0.0)PLAGLAPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BAZ2A 212873.4 3 10 471.1 302.34 HUMAN 1 -8.2859 14.7851 PSAARGGSPLPGPAQ-p P22674;S81-p PSAARGGSPLPGPAQ 0.181080338359562 0.0239943962805675 -0.342 0.54 14.6380214999638 22.0809410832728 -0.342 0.54 0.0343714497037651 0.00619306861426109 -2.81083347378085 4.33585624707406 P22674 CCNO P22674.S81.p_CCNO P22674_S81s _1_1_81_81 P22674 P22674|P22674-2 Cyclin-O HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26247.26247.4 17.75 13.97 9.981 5 1 1 0 1016.514 3983.0638 S81s TMT10 79 (R) GGsPLPGPAQPVAQLDLQTFRDYGQSCYAFRK (A) GGS(0.99)PLPGPAQPVAQLDLQT(0.0)FRDY(0.0)GQS(0.0)CY(0.0)AFRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCNO 39065.2 5 1 3430.1 51.23 HUMAN 1 -14.638 22.0809 PSAEADWSPGLELHP-p Q9Y3Z3;S33-p PSAEADWSPGLELHP 0.528366692415548 0.00994130061946245 0.108666666666667 0.606666666666667 5.12720256545565 28.1485607617652 0.108666666666667 0.606666666666667 0.307099948387999 0.00153159494332889 1.12731835798774 5.8794371187027 Q9Y3Z3 SAMHD1 Q9Y3Z3.S33.p_SAMHD1 Q9Y3Z3_S33s _1_1_33_33 Q9Y3Z3 Q9Y3Z3|Q9Y3Z3-4|Q9Y3Z3-3 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21001.21001.4 21.07 21.07 4.663 6 1 1 0 763.3689 2970.4885 S33s TMT10 21 (R) TPSNTPSAEADWsPGLELHPDYK (T) T(0.0)PS(0.0)NT(0.0)PS(0.0)AEADWS(0.99)PGLELHPDY(0.0)K K:TMT10,s:Phosphorylated S SAMHD1 72940.9 9 3 1871.1 109.9 HUMAN 1 5.1272 28.1486 PSAGGPDSAGRKRPL-p Q01970;S480-p PSAGGPDSAGRKRPL 0.142325066015487 0.0453606067865977 0.292 -0.241666666666667 17.2987859868908 17.9776585507128 0.292 -0.241666666666667 0.0186260773139253 0.0159306737971658 3.32171690369937 -3.45492120015682 Q01970 PLCB3 Q01970.S480.p_PLCB3 Q01970_S480s _1_1_480_480 Q01970 Q01970|Q01970-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3218.3218.3 8.46 8.46 3.721 2 1 1 0 525.2525 1493.7771 S480s TMT10 471 (R) HRPSAGGPDsAGR (K) HRPS(0.0)AGGPDS(0.99)AGR s:Phosphorylated S PLCB3 139595.3 1 1 1609.1 127.8 HUMAN 1 17.2988 -17.9777 PSAISRHSPGPTPQP-p Q4ZG55;S1193-p PSAISRHSPGPTPQP 0.225563990023236 0.057295243669286 0.283 0.433333333333333 12.4195584576462 16.5469491992058 0.283 0.433333333333333 0.0572854269479634 0.0221464989471192 2.40698136707154 3.17159091076332 Q4ZG55 GREB1 Q4ZG55.S1193.p_GREB1 Q4ZG55_S1193s _1_1_1193_1193 Q4ZG55 Q4ZG55|Q4ZG55-4 Protein GREB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5421.5421.2 13.27 13.27 6.839 3 1 1 0 814.848 1548.7224 S1193s Hydrogen 1192 (R) HsPGPTPQPDCSLR (T) HS(0.99)PGPT(0.0)PQPDCS(0.0)LR C:Carbamidomethylation,s:Phosphorylated S GREB1 219316 5 8 1072.1 180.69 HUMAN 1 12.4196 16.5469 PSAKGKQSPPGPGKA-p O75362;S795-p PSAKGKQSPPGPGKA 0.357172198749098 0.00402540446823046 0.210666666666667 -0.739333333333333 8.31052776147773 35.3106328230871 0.210666666666667 -0.739333333333333 0.147552721399525 0.000294399262483848 1.68899052457369 -8.20927417084972 O75362 ZNF217 O75362.S795.p_ZNF217 O75362_S795s _1_1_795_795 O75362 O75362 Zinc finger protein 217 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19865.19865.5 20.45 17.92 3.623 7 1 1 0 741.2203 3622.0986 S795s TMT10 792 (K) GKQsPPGPGKAPLTSGIDSSTLAPSNLK (S) GKQS(0.99)PPGPGKAPLT(0.0)S(0.0)GIDS(0.0)S(0.0)T(0.0)LAPS(0.0)NLK K:TMT10,s:Phosphorylated S ZNF217 117152.8 8 12 394.1 330.8 HUMAN 1 8.3105 -35.3106 PSAKGTISAPGKVVT-p E7ETY2;S807-p PSAKGTISAPGKVVT 0.389389394272965 0.623662510608201 0.139666666666667 0.0693333333333334 7.57552134270515 2.78846616585738 0.139666666666667 0.0693333333333334 0.174762345882451 0.526203077118093 1.56142567835817 0.677018605356558 E7ETY2 TCOF1 E7ETY2.S807.p_TCOF1 E7ETY2_S807s _1_1_807_807 E7ETY2 Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2|Q13428-5 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10128.10128.2 9.07 2.78 1.766 2 1 1 0 634.8538 1188.7352 S807s TMT10 804 (K) GTIsAPGK (V) GT(0.0)IS(0.99)APGK K:TMT10,s:Phosphorylated S TCOF1 152529.5 1 18 19.1 1034.65 HUMAN 1 7.5755 2.7885 PSALKLGTPLLVRRS-p Q8TEW8;T133-p PSALKLGTPLLVRRS 0.806926580726871 0.241037967068421 0.0393333333333333 0.185333333333333 1.79401494826369 8.14037817708805 0.0393333333333333 0.185333333333333 0.661604583332318 0.153448335648387 0.462686029863808 1.65896846585094 Q8TEW8 PARD3B Q8TEW8.T133.p_PARD3B Q8TEW8_T133t _1_1_133_133 Q8TEW8 Q8TEW8|Q8TEW8-2|Q8TEW8-3|Q8TEW8-6|Q8TEW8-5 Partitioning defective 3 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21612.21612.2 11.44 11.44 99 1 1 1 0 589.3495 1097.7244 T133t TMT10 131 (K) LGtPLLVR (R) LGT(1.0)PLLVR t:Phosphorylated T PARD3B 133176.7 2 32 65.4 692.2 HUMAN 1 1.794 8.1404 PSAMGRASPPLFQSR-p O15055;S977-p PSAMGRASPPLFQSR 0.520053295029462 0.292509087342605 -0.13 -0.130333333333333 5.24454051125137 7.04759739546832 -0.13 -0.130333333333333 0.298913788458803 0.197351422198107 -1.14868851630243 -1.46893373701229 O15055 PER2 O15055.S977.p_PER2 O15055_S977s _1_1_977_977 O15055 O15055 Period circadian protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16157.16157.3 15.5 9.52 1.583 4 1 1 0 727.3691 2100.1222 S977s TMT10 967 (R) ATPPSAMGRAsPPLFQSR (S) AT(0.0)PPS(0.0)AMGRAS(0.99)PPLFQS(0.0)R s:Phosphorylated S PER2 138402.8 3 5 1527.1 133.98 HUMAN 1 -5.2445 -7.0476 PSAPGQESPIPDPKL-p E9PGC8;S2056-p PSAPGQESPIPDPKL 0.300478673172259 0.163226288290066 0.148666666666667 -0.214666666666667 9.81039036108447 10.34981866255 0.148666666666667 -0.214666666666667 0.104462631984903 0.0922609949459266 1.94878683553075 -2.04169847052829 E9PGC8 NotFound E9PGC8.S2056.p_NotFound E9PGC8_S2056s _1_1_2056_2056 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17011.17011.2 14.73 9.28 3.463 2 1 1 0 1029.0422 1977.1057 S2056s TMT10 2048 (R) VPSAPGQEsPIPDPK (L) VPS(0.0)APGQES(0.99)PIPDPK K:TMT10,s:Phosphorylated S MAP1A 332906.7 5 32 20.1 1016.98 HUMAN 1 9.8104 -10.3498 PSAQVEGSPVAGSDG-p Q9UFC0;S259-p PSAQVEGSPVAGSDG 0.123401035738524 0.0203619676245387 0.382 -0.414666666666667 18.89970449145 23.1596491382784 0.382 -0.414666666666667 0.0128833721150115 0.00483097829404034 3.64669263405926 -4.58708641749812 Q9UFC0 LRWD1 Q9UFC0.S259.p_LRWD1 Q9UFC0_S259s _1_1_259_259 Q9UFC0 Q9UFC0 Leucine-rich repeat and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12786.12786.3 15.67 15.67 2.327 5 1 1 0 965.803 2815.4296 S259s TMT10 248 (R) ACASPSAQVEGsPVAGSDGSQPAVK (L) ACAS(0.0)PS(0.0)AQVEGS(0.99)PVAGS(0.0)DGS(0.0)QPAVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LRWD1 72115.1 1 4 1514.1 134.66 HUMAN 1 18.8997 -23.1596 PSASSPESPVLAASP-p Q96JM3;S247-p PSASSPESPVLAASP 0.55827821703547 0.0618137900033437 0.0836666666666667 0.214333333333333 4.67476153886294 16.0946508806117 0.0836666666666667 0.214333333333333 0.340819037878127 0.024577341948976 1.04410450920731 3.08419011989203 Q96JM3 CHAMP1 Q96JM3.S247.p_CHAMP1 Q96JM3_S247sS253s_2_2_247_253 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23235.23235.5 13.03 13.03 1.104 10 2 2 0 937.8513 4525.304 S247s S253s TMT10 230 (K) QSHFPETLGPPSASSPEsPVLAAsPEPWGPSPAASPESRK (S) QS(0.0)HFPET(0.0)LGPPS(0.0)AS(0.0)S(0.0)PES(0.99)PVLAAS(0.99)PEPWGPS(0.0)PAAS(0.0)PES(0.0)RK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 6 39 25.1 950.05 HUMAN 2 4.6748 16.0947 PSATLQRSPGVQPQL-p O00268;S543-p PSATLQRSPGVQPQL 0.665380921555407 0.0942940720317618 0.117 0.209666666666667 3.30862000834973 13.5641330590963 0.117 0.209666666666667 0.466807687143149 0.0440135799204395 0.782428752815083 2.61172698154967 O00268 TAF4 O00268.S543.p_TAF4 O00268_S543s _1_1_543_543 O00268 O00268 Transcription initiation factor TFIID subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24340.24340.4 32.32 32.32 1.221 12 1 1 0 1299.686 5115.7348 S543s TMT10 526 (K) QVSQAQTTVQPSATLQRsPGVQPQLVLGGAAQTASLGTATAVQTGTPQR (T) QVS(0.0)QAQT(0.0)T(0.0)VQPS(0.0)AT(0.0)LQRS(0.99)PGVQPQLVLGGAAQT(0.0)AS(0.0)LGT(0.0)AT(0.0)AVQT(0.0)GT(0.0)PQR s:Phosphorylated S TAF4 110397.6 4 4 1541.1 133.04 HUMAN 1 3.3086 13.5641 PSAVTPLSPKGVTLP-p E9PAV3;S874-p PSAVTPLSPKGVTLP 0.225135985100729 0.00244664020608596 -0.185 -0.898666666666667 12.4387035460798 40.0494635921032 -0.185 -0.898666666666667 0.0570334502868357 9.88675200844591e-05 -2.4103989231931 -10.1536330614075 E9PAV3 NACA E9PAV3.S874.p_NACA E9PAV3_S874s _1_1_874_874 E9PAV3 E9PAV3 Nascent polypeptide-associated complex subunit alpha, muscle-specific form HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17071.17071.3 16.52 13.12 3.498 4 1 1 0 621.013 1781.0573 S874s TMT10 863 (K) GAPTPSAVTPLsPK (G) GAPT(0.0)PS(0.0)AVT(0.0)PLS(0.99)PK K:TMT10,s:Phosphorylated S NACA 206102.3 1 2 533.1 279.72 HUMAN 1 -12.4387 -40.0495 PSCEREPSGDENCAE-p Q8TD26;S2680-p PSCEREPSGDENCAE 0.296620709922353 0.0865944500951003 0.149 0.186333333333333 9.94033746813317 14.0653691720386 0.149 0.186333333333333 0.101383260290538 0.0392159809369878 1.97134686630276 2.70329745261871 Q8TD26 CHD6 Q8TD26.S2680.p_CHD6 Q8TD26_S2680s _1_1_2680_2680 Q8TD26 Q8TD26 Chromodomain-helicase-DNA-binding protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8807.8807.5 18.02 18.02 1.137 5 1 1 0 908.4153 4458.0727 S2680s TMT10 2660 (K) TKGDNPNSHPEPAPSCEREPsGDENCAEPSAPLPAER (E) T(0.0)KGDNPNS(0.0)HPEPAPS(0.0)CEREPS(0.99)GDENCAEPS(0.0)APLPAER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CHD6 308259.4 1 11 1006.1 189.22 HUMAN 1 9.9403 14.0654 PSDEDEDSDLEEFVR-p Q2YD98;S287-p PSDEDEDSDLEEFVR 0.321412916785627 0.00297589273654222 -0.189666666666667 0.651333333333333 9.22424531870523 38.050434041018 -0.189666666666667 0.651333333333333 0.119557126418221 0.000156659449426457 -1.84718797308113 9.28812378244375 Q2YD98 UVSSA Q2YD98.S287.p_UVSSA Q2YD98_S281sS287s_2_2_281_287 Q2YD98 Q2YD98 UV-stimulated scaffold protein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22255.22458.3 17.13 17.13 1.183 5 2 2 0 1123.7922 3209.4192 S281s S287s TMT10 266 (R) AGGGAQPSQTATGDPsDEDEDsDLEEFVR (S) AGGGAQPS(0.0)QT(0.0)AT(0.0)GDPS(0.99)DEDEDS(0.99)DLEEFVR s:Phosphorylated S UVSSA 81388.8 1 5 2615.1 76.7 HUMAN 1 -9.2242 38.0504 PSDEEQGSPPEDKLL-p Q92766;S1225-p PSDEEQGSPPEDKLL 0.54675450438427 0.381237253441848 -0.117333333333333 -0.101666666666667 4.84178457763122 5.56328633584708 -0.117333333333333 -0.101666666666667 0.327960501798845 0.277761063548481 -1.07498294001166 -1.20608764898862 Q92766 RREB1 Q92766.S1225.p_RREB1 Q92766_S1219sS1225s_2_2_1219_1225 Q92766 Q92766-2|Q92766-3|Q92766-5|A0A087X055 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22731.22731.4 18.03 18.03 1.208 5 2 2 0 1167.7616 4508.0802 S1219s S1225s TMT10 1193 (K) FSPFLQTAEDNTQDEVAGAPADHHGPsDEEQGsPPEDK (L) FS(0.0)PFLQT(0.0)AEDNT(0.0)QDEVAGAPADHHGPS(0.99)DEEQGS(0.99)PPEDK K:TMT10,s:Phosphorylated S RREB1 184269.8 2 34 179.1 480.48 HUMAN 1 -4.8418 -5.5633 PSDETVFTPVEEKCR-p Q13233;T1114-p PSDETVFTPVEEKCR 0.180801698912031 0.0306352929364278 -0.241666666666667 -0.275 14.6537125076878 20.4583200595517 -0.241666666666667 -0.275 0.0342474901338614 0.0089984559301389 -2.81375345442152 -3.97418043043722 Q13233 MAP3K1 Q13233.T1114.p_MAP3K1 Q13233_T1114t _1_1_1114_1114 Q13233 Q13233 Mitogen-activated protein kinase kinase kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24369.24369.3 21.21 21.21 2.329 8 1 1 0 1239.5536 3636.6722 T1114t TMT10 1091 (K) CDDSFGCSSNSSNAVIPSDETVFtPVEEK (C) CDDS(0.0)FGCS(0.0)S(0.0)NS(0.0)S(0.0)NAVIPS(0.0)DET(0.0)VFT(0.99)PVEEK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MAP3K1 166521 2 12 505.1 289.91 HUMAN 1 -14.6537 -20.4583 PSDKCSASPPLRRQC-p P46013;S827-p PSDKCSASPPLRRQC 0.983049256258921 0.00404124447761282 -0.00433333333333333 -0.697 0.146039080543719 35.2576233392326 -0.00433333333333333 -0.697 0.966932353505674 0.000298014685780183 -0.043408963227772 -8.18953889139159 P46013 MKI67 P46013.S827.p_MKI67 P46013_S827s _1_1_827_827 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4704.5125.3 10.87 8.21 2.235 2 1 1 0 451.5618 1272.7044 S827s TMT10 824 (K) CSAsPPLRR (Q) CS(0.0)AS(0.99)PPLRR C:Carbamidomethylation,s:Phosphorylated S MKI67 360912.4 6 18 5.1 1918.46 HUMAN 1 -0.146 -35.2576 PSDKDRQSPPPAKRP-p E7ERS3;S866-p PSDKDRQSPPPAKRP 0.931597855638632 0.0939846736396292 -0.017 0.209 0.609756402045245 13.5826679886434 -0.017 0.209 0.869009171079901 0.0438261379221792 -0.172905607152301 2.61509738681384 E7ERS3 ZC3H18 E7ERS3.S866.p_ZC3H18 E7ERS3_S866s _1_1_866_866 E7ERS3 E7ERS3|Q86VM9 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5239.5659.5 17.2 17.2 6.582 3 1 1 0 528.4856 2558.4294 S866s TMT10 856 (K) RYEPSDKDRQsPPPAK (R) RY(0.0)EPS(0.0)DKDRQS(0.99)PPPAK K:TMT10,s:Phosphorylated S ZC3H18 109165.8 15 17 157.1 499.97 HUMAN 1 -0.6098 13.5827 PSDKSVDS_______-p Q9NVA4;S438-p PSDKSVDS_______ 0.826776350969775 0.489254116568957 0.039 -0.124666666666667 1.59191483272993 4.14946260908258 0.039 -0.124666666666667 0.693120137441247 0.384639373927511 0.416404254387999 -0.945429287184988 Q9NVA4 TMEM184C Q9NVA4.S438.p_TMEM184C Q9NVA4_S438s _1_1_438_438 Q9NVA4 Q9NVA4 Transmembrane protein 184C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23433.23433.4 14.22 14.22 1.524 6 1 1 0 872.9666 3408.8767 S438s TMT10 416 (K) ISDEILSDTIGEKKEPSDKSVDs (-) IS(0.0)DEILS(0.0)DT(0.0)IGEKKEPS(0.0)DKS(0.0)VDS(0.99) K:TMT10,s:Phosphorylated S TMEM184C 50939.5 4 2 4180.1 35.97 HUMAN 1 1.5919 -4.1495 PSDLSPESPMLSSPP-p Q9NZ72;S68-p PSDLSPESPMLSSPP 0.42013428346123 0.0266169244131195 -0.149333333333333 -0.429333333333333 6.9523362003789 21.3765090331138 -0.149333333333333 -0.429333333333333 0.201728091580357 0.00728365047200165 -1.45266731098557 -4.17653442802753 Q9NZ72 STMN3 Q9NZ72.S68.p_STMN3 Q9NZ72_S68s _1_1_68_68 Q9NZ72 Q9NZ72|Q9NZ72-2 Stathmin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19331.19331.3 7.88 7.88 2 6 1 1 0 765.3827 2214.1728 S68s TMT10 60 (K) SPSDLSPEsPMLSSPPK (K) S(0.0)PS(0.0)DLS(0.0)PES(0.99)PMLS(0.0)S(0.0)PPK K:TMT10,s:Phosphorylated S STMN3 21130.6 1 1 6258.1 12.8 HUMAN 1 -6.9523 -21.3765 PSDSAVHSPFTKRQA-p Q14157-5;S416-p PSDSAVHSPFTKRQA 0.170860072814485 0.0123380499153042 -0.249666666666667 -0.641 15.3104409771385 26.6479464323311 -0.249666666666667 -0.641 0.0294412267611844 0.00216374141009164 -2.93687996922027 -5.466212196331 Q14157 UBAP2L Q14157.5.S416.p_UBAP2L Q14157-5_S416s _1_1_416_416 Q14157-5 Q14157-5|F8W726|Q14157-3|Q14157-1|Q14157-4 Isoform 5 of Ubiquitin-associated protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8650.8650.4 16.63 16.63 1.33 4 1 1 0 521.0205 2001.0918 S416s TMT10 408 (K) NPSDSAVHsPFTKR (Q) NPS(0.0)DS(0.0)AVHS(0.99)PFT(0.0)KR K:TMT10,s:Phosphorylated S UBAP2L 116866.1 6 12 189.1 467.5 HUMAN 1 -15.3104 -26.6479 PSDSSTASTPVAEQI-p Q16643-3;S391-p PSDSSTASTPVAEQI 0.341848649788872 0.0560573273283884 -0.164666666666667 -0.248333333333333 8.66356734090282 16.6723110092273 -0.164666666666667 -0.248333333333333 0.136032683654267 0.0215163648070967 -1.75012549760898 -3.19599250559197 Q16643 DBN1 Q16643.3.S391.p_DBN1 Q16643-3_S391sT392t_2_2_391_392 Q16643-3 Q16643-3|Q16643-2|D6R9Q9 Isoform 3 of Drebrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18830.18830.3 11.83 11.83 2.293 9 2 2 0 1072.5043 3055.5567 S391s T392t TMT10 374 (R) MAPTPIPTRSPSDSSTAstPVAEQIER (A) MAPT(0.0)PIPT(0.0)RS(0.0)PS(0.0)DS(0.0)S(0.0)T(0.0)AS(0.99)T(0.99)PVAEQIER s:Phosphorylated S,t:Phosphorylated T DBN1 76925.9 9 9 1729.1 119.21 HUMAN 1 -8.6636 -16.6723 PSDTKAESPAEKVPE-p Q9UKV3;S490-p PSDTKAESPAEKVPE 0.115454793532401 0.00973056925578839 -0.573333333333333 0.796 19.502770946469 28.3257120048357 -0.573333333333334 0.796 0.0112130279670699 0.00147037733437795 -3.77304289986698 5.92974008602154 Q9UKV3 ACIN1 Q9UKV3.S490.p_ACIN1 Q9UKV3_S490s _1_1_490_490 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24289.24289.3 19.62 19.62 5.07 2 1 1 0 939.8585 2737.5955 S490s TMT10 488 (K) AEsPAEKVPEESVLPLVQK (S) AES(0.99)PAEKVPEES(0.0)VLPLVQK K:TMT10,s:Phosphorylated S ACIN1 152258.2 4 14 32.2 899.18 HUMAN 1 -19.5028 28.3257 PSDVDKLSPTDNLPR-p P09543;S318-p PSDVDKLSPTDNLPR 0.916056654296661 0.0402798569271393 -0.0216666666666667 -0.250666666666667 0.745616597260438 18.7049977627651 -0.0216666666666667 -0.250666666666667 0.842244803755826 0.0134741141945294 -0.20879258711611 -3.60327868172391 P09543 CNP P09543.S318.p_CNP P09543_S318s _1_1_318_318 P09543 P09543|P09543-2 2',3'-cyclic-nucleotide 3'-phosphodiesterase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29742.29742.4 20.11 20.11 1.103 4 1 1 0 887.2145 3465.863 S318s TMT10 300 (R) VELSEQQLQLWPSDVDKLsPTDNLPR (G) VELS(0.0)EQQLQLWPS(0.0)DVDKLS(0.99)PT(0.0)DNLPR K:TMT10,s:Phosphorylated S CNP 47977.1 2 3 2334.1 87.42 HUMAN 1 -0.7456 -18.705 PSEEKAASPPRPLLS-p Q9NQW6;S182-p PSEEKAASPPRPLLS 0.540088410971781 0.00357603011858158 -0.097 -0.621666666666667 4.93840219849945 36.4562883448354 -0.097 -0.621666666666667 0.320744915170991 0.000226136760021837 -1.09275779186455 -8.646099512667 Q9NQW6 ANLN Q9NQW6.S182.p_ANLN Q9NQW6_S182s _1_1_182_182 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12158.12360.4 18.63 18.63 6.679 4 1 1 0 582.569 2247.2883 S182s TMT10 180 (K) AAsPPRPLLSNASATPVGRR (G) AAS(0.99)PPRPLLS(0.0)NAS(0.0)AT(0.0)PVGRR s:Phosphorylated S ANLN 125566 8 15 68.1 675.08 HUMAN 1 -4.9384 -36.4563 PSEGRMVSDINNAWG-p P12814-4;S362-p PSEGRMVSDINNAWG 0.11946279782348 0.15952262667856 -0.300333333333333 0.19 19.1992136523798 10.4851437858503 -0.300333333333333 0.19 0.0120248214020888 0.0894304922870559 -3.70916150602374 2.06525594221861 P12814 ACTN1 P12814.4.S362.p_ACTN1 P12814-4_S362s _1_1_362_362 P12814-4 P12814-4|P12814-3|P12814-2|H9KV75 Isoform 4 of Alpha-actinin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31478.31478.3 16.4 16.4 99 1 1 1 0 844.4074 2451.2412 S362s TMT10 360 (R) MVsDINNAWGCLEQVEK (G) MVS(1.0)DINNAWGCLEQVEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ACTN1 107710.1 2 15 1097.2 178.17 HUMAN 1 -19.1992 10.4851 PSESKSKSPPPERKN-p Q9NXL9;S1073-p PSESKSKSPPPERKN 0.042398068248358 0.0228338152729574 0.557 -0.353333333333333 30.6680757645467 22.4085038635273 0.557 -0.353333333333333 0.000857417658484604 0.00574314278340378 6.63799051542282 -4.41119732089826 Q9NXL9 MCM9 Q9NXL9.S1073.p_MCM9 Q9NXL9_S1073s _1_1_1073_1073 Q9NXL9 Q9NXL9|Q9NXL9-4 DNA helicase MCM9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.4406.4406.4 7.5 7.5 1.41 2 1 1 0 449.0132 1713.0626 S1073s TMT10 1071 (K) SKsPPPERK (N) S(0.0)KS(0.99)PPPERK K:TMT10,s:Phosphorylated S MCM9 128793.8 4 6 1757.1 117.14 HUMAN 1 30.6681 -22.4085 PSETERLTDDY____-p P26006;T1048-p PSETERLTDDY____ 0.729757185802638 0.257768360270633 0.0526666666666667 0.188333333333333 2.59769505397939 7.75789622353728 0.0526666666666667 0.188333333333333 0.549832610983602 0.167575443572775 0.637444222558867 1.59264311305897 P26006 ITGA3 P26006.T1048.p_ITGA3 P26006_T1048t _1_1_1048_1048 P26006 P26006 Integrin alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10813.10813.3 9.56 9.56 1.283 5 1 1 0 617.2747 1769.8391 T1048t TMT10 1039 (K) SQPSETERLtDDY (-) S(0.0)QPS(0.0)ET(0.0)ERLT(0.99)DDY(0.0) t:Phosphorylated T ITGA3 117808.3 2 1 6588.1 10.78 HUMAN 1 2.5977 7.7579 PSETPWLSPDPLFLE-p Q8TBC5-3;S244-p PSETPWLSPDPLFLE 0.858115471854467 0.0316031790361677 -0.032 0.277 1.29515049206864 20.2682038208956 -0.032 0.277 0.742138480651766 0.00940112046903851 -0.346358745140307 3.93300424082504 Q8TBC5 ZSCAN18 Q8TBC5.3.S244.p_ZSCAN18 Q8TBC5-3_S244s _1_1_244_244 Q8TBC5-3 Q8TBC5-3|Q8TBC5-2|Q8TBC5-4 Isoform 3 of Zinc finger and SCAN domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36579.36579.4 28.85 25.48 1.854 5 1 1 0 1197.359 4706.4377 S244s TMT10 212 (R) HMDPLLLPGELASPSQALGAGEIPAPSETPWLsPDPLFLEQR (R) HMDPLLLPGELAS(0.0)PS(0.0)QALGAGEIPAPS(0.0)ET(0.0)PWLS(0.99)PDPLFLEQR s:Phosphorylated S ZSCAN18 61394 3 4 1147.1 172.79 HUMAN 1 -1.2952 20.2682 PSEVDMNSPKSKKAK-p Q9NR30;S71-p PSEVDMNSPKSKKAK 0.105990482053338 0.000952253650599092 -0.359333333333333 -1.69133333333333 20.5167927306977 57.2256557677003 -0.359333333333333 -1.69133333333333 0.00887811419662821 1.89423747030393e-06 -3.99074794618896 -21.4206858074681 Q9NR30 DDX21 Q9NR30.S71.p_DDX21 Q9NR30_S71s _1_1_71_71 Q9NR30 Q9NR30 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9983.10387.3 19.29 15.06 9.557 2 1 1 0 733.717 2119.1672 S71s TMT10 61 (K) KAEPSEVDMNsPK (S) KAEPS(0.0)EVDMNS(0.99)PK K:TMT10,s:Phosphorylated S DDX21 87856.3 39 16 103.1 590.75 HUMAN 1 -20.5168 -57.2257 PSFDASASEEEEEEE-p Q9H4L4;S75-p PSFDASASEEEEEEE 0.758824185220205 0.30870085018357 0.0436666666666667 0.098 2.29597489574653 6.74688893668199 0.0436666666666667 0.098 0.589389657178776 0.211500357758213 0.573394023840655 1.41625338975581 Q9H4L4 SENP3 Q9H4L4.S75.p_SENP3 Q9H4L4_S73sS75s_2_2_73_75 Q9H4L4 Q9H4L4 Sentrin-specific protease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24646.24646.4 13.2 13.2 3.144 3 2 2 0 1160.234 4477.9753 S73s S75s TMT10 62 (R) RLPVPRPSFDAsAsEEEEEEEEEEDEDEEEEVAAWR (L) RLPVPRPS(0.0)FDAS(0.99)AS(0.99)EEEEEEEEEEDEDEEEEVAAWR s:Phosphorylated S SENP3 65636.2 5 9 396.1 329.46 HUMAN 1 2.296 6.7469 PSFGQSPSPTFIPRS-p Q14106;S163-p PSFGQSPSPTFIPRS 0.45060350179761 0.396891309855123 0.133333333333333 0.168 6.39444883319326 5.3364941016279 0.133333333333333 0.168 0.229379771978814 0.292651389072083 1.35454015434747 1.16513134083585 Q14106 TOB2 Q14106.S163.p_TOB2 Q14106_S163s _1_1_163_163 Q14106 Q14106 Protein Tob2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32884.32884.3 18.95 18.95 1.117 12 1 1 0 1459.0315 4295.1094 S163s TMT10 131 (K) SSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSPsPTFIPR (S) S(0.0)S(0.0)FNPDAQVFVPIGS(0.0)QDS(0.0)S(0.0)LS(0.0)NS(0.0)PS(0.0)PS(0.0)FGQS(0.0)PS(0.99)PT(0.0)FIPR s:Phosphorylated S TOB2 36802.7 1 2 2784.1 70.75 HUMAN 1 6.3944 5.3365 PSFKLSLSSGTKTNL-p Q6IN85;S749-p PSFKLSLSSGTKTNL 0.224208366363566 0.416748768402086 -0.359666666666667 0.100333333333333 12.4780883201236 5.05588867260377 -0.359666666666667 0.100333333333333 0.0565185703824269 0.312184353541036 -2.41743264801463 1.11406290596292 Q6IN85 PPP4R3A Q6IN85.S749.p_PPP4R3A Q6IN85_S749s _1_1_749_749 Q6IN85 Q6IN85|Q6IN85-2 Serine/threonine-protein phosphatase 4 regulatory subunit 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15986.15986.2 8.92 4.21 1.133 4 1 1 0 665.8738 1250.772 S749s TMT10 746 (K) LSLsSGTK (T) LS(0.0)LS(0.99)S(0.0)GT(0.0)K K:TMT10,s:Phosphorylated S PPP4R3A 95994.2 1 6 842.1 214.14 HUMAN 1 -12.4781 5.0559 PSGDELDSFETNTEP-p Q8N1W1-6;S519-p PSGDELDSFETNTEP 0.295408715152096 0.0805848986332585 0.203666666666667 0.336 9.97029685664566 14.5061253207242 0.203666666666667 0.336 0.100686284362967 0.0354313310608172 1.97655045334116 2.78458338395875 Q8N1W1 ARHGEF28 Q8N1W1.6.S519.p_ARHGEF28 Q8N1W1-6_S513sS519s_2_2_513_519 Q8N1W1-6 Q8N1W1-6|Q8N1W1-3|Q8N1W1-4|Q8N1W1-5 Isoform 6 of Rho guanine nucleotide exchange factor 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28408.28408.3 12.27 12.27 1.152 6 2 2 0 1010.7689 2870.3529 S513s S519s TMT10 509 (R) TGIPsGDELDsFETNTEPDFNISR (A) T(0.0)GIPS(0.99)GDELDS(0.99)FET(0.0)NT(0.0)EPDFNIS(0.0)R s:Phosphorylated S ARHGEF28 196740.3 1 7 3005.1 63.48 HUMAN 1 9.9703 14.5061 PSGFVRASPRTLSTR-p Q13464;S1328-p PSGFVRASPRTLSTR 0.182717204958156 0.10045646509765 0.302333333333333 0.239666666666667 14.5230533603013 13.1877808850739 0.302333333333333 0.239666666666667 0.0352934947326798 0.0479978640720015 2.78946883308532 2.54354002442869 Q13464 ROCK1 Q13464.S1328.p_ROCK1 Q13464_S1328s _1_1_1328_1328 Q13464 Q13464 Rho-associated protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8563.8774.3 12.03 8.23 4.284 2 1 1 0 531.9421 1513.8437 S1328s TMT10 1319 (K) NPPSGFVRAsPR (T) NPPS(0.0)GFVRAS(0.99)PR s:Phosphorylated S ROCK1 159198.9 4 6 2757.1 71.63 HUMAN 1 14.5231 13.1878 PSGGGGETPRTAALA-p Q9H330-2;T36-p PSGGGGETPRTAALA 0.678842125738791 0.381000842151609 -0.0636666666666667 -0.243666666666667 3.14863820172103 5.56697269000745 -0.0636666666666667 -0.243666666666667 0.484324211208453 0.277525395987332 -0.750444033013899 -1.20675118943162 Q9H330 TMEM245 Q9H330.2.T36.p_TMEM245 Q9H330-2_T36t _1_1_36_36 Q9H330-2 Q9H330|Q9H330-2|Q9H330-4 Isoform 2 of Transmembrane protein 245 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5971.5971.2 12.29 7.75 2.401 2 1 1 0 725.85 1370.7226 T36t TMT10 26 (R) AVGPSGGGGEtPR (T) AVGPS(0.0)GGGGET(0.99)PR t:Phosphorylated T TMEM245 97868.8 2 3 2319.1 87.95 HUMAN 1 -3.1486 -5.567 PSGHLAPSPPAFDGE-p Q9P2Y4;S16-p PSGHLAPSPPAFDGE 0.997068365879862 0.167719716583575 -0.000666666666666667 0.169333333333333 0.0219768868736351 10.2022424255833 -0.000666666666666675 0.169333333333333 0.994952416867717 0.0954499614749005 -0.0066237176647116 2.01603589611742 Q9P2Y4 ZNF219 Q9P2Y4.S16.p_ZNF219 Q9P2Y4_S16s _1_1_16_16 Q9P2Y4 Q9P2Y4 Zinc finger protein 219 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21349.21349.3 18.26 18.26 18.259 2 1 1 0 828.7417 2404.2458 S16s TMT10 8 (R) APSGHLAPsPPAFDGELDLQR (Y) APS(0.0)GHLAPS(0.99)PPAFDGELDLQR s:Phosphorylated S ZNF219 77959.9 2 49 62.3 704.36 HUMAN 1 -0.022 10.2022 PSGMQGPSPINMGAV-p E7EWR4;S506-p PSGMQGPSPINMGAV 0.606646400139677 0.291782842043993 -0.0826666666666667 0.132666666666667 4.0156754169131 7.06080515296408 -0.0826666666666667 0.132666666666667 0.39667283338028 0.196752149054843 -0.920124792559123 1.47124267549553 E7EWR4 CSTF2 E7EWR4.S506.p_CSTF2 E7EWR4_S506s _1_1_506_506 E7EWR4 E7EWR4|P33240 Cleavage stimulation factor subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24948.24948.3 12.48 12.45 4.375 3 1 1 0 881.769 2563.3322 S506s TMT10 496 (R) GPIPSGMQGPsPINMGAVVPQGSR (Q) GPIPS(0.0)GMQGPS(0.99)PINMGAVVPQGS(0.0)R s:Phosphorylated S CSTF2 63055.8 1 5 2335.1 87.35 HUMAN 1 -4.0157 7.0608 PSGPAPSS_______-p Q96MG7;S304-p PSGPAPSS_______ 0.471141674992432 0.732542102923323 -0.193333333333333 0.0373333333333333 6.0321957307731 1.86414992729818 -0.193333333333333 0.0373333333333333 0.249333381431165 0.651006023993416 -1.29029697642622 0.478448176653249 Q96MG7 NDNL2 Q96MG7.S304.p_NDNL2 Q96MG7_S304s _1_1_304_304 Q96MG7 Q96MG7 Non-structural maintenance of chromosomes element 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4736.4736.2 14.02 14.02 1.728 3 1 1 0 730.8578 1380.7433 S304s TMT10 293 (R) ARPQPSGPAPSs (-) ARPQPS(0.0)GPAPS(0.0)S(0.99) s:Phosphorylated S NSMCE3 34364.4 1 2 2978.1 64.19 HUMAN 1 -6.0322 1.8641 PSGPKSYSITEKHYA-p Q96S38;S762-p PSGPKSYSITEKHYA 0.800325882980012 0.592522780412723 0.053 0.06 1.86299546561075 3.07543857334263 0.053 0.06 0.651179100430014 0.492556599889473 0.478243000460545 0.735588767476042 Q96S38 RPS6KC1 Q96S38.S762.p_RPS6KC1 Q96S38_S762s _1_1_762_762 Q96S38 Q96S38|Q96S38-2|F6RJM5|F5H7T0|A0A087X1U5 Ribosomal protein S6 kinase delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12260.12260.2 10.48 4.56 2.246 4 1 1 0 683.3588 1285.7404 S762s TMT10 760 (K) SYsITEK (H) S(0.0)Y(0.0)S(0.99)IT(0.0)EK K:TMT10,s:Phosphorylated S RPS6KC1 119593.1 2 22 253.1 405.38 HUMAN 1 1.863 3.0754 PSGPVLASPQAGIIP-p Q99700;S709-p PSGPVLASPQAGIIP 0.835283869384707 0.0497085691869837 0.0303333333333333 0.243333333333333 1.50925266465057 17.4333994134999 0.0303333333333333 0.243333333333333 0.706439108074408 0.0180576012498723 0.397154531606199 3.34585891355474 Q99700 ATXN2 Q99700.S709.p_ATXN2 Q99700_S709s _1_1_709_709 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31086.31086.5 27.31 25.31 2.465 9 1 1 0 909.6675 4464.3394 S709s TMT10 695 (R) QNSIGNTPSGPVLAsPQAGIIPTEAVAMPIPAASPTPASPASNR (A) Q(0.0)N(0.0)S(0.0)IGN(0.0)T(0.0)PS(0.0)GPVLAS(0.99)PQAGIIPT(0.0)EAVAM(0.0)PIPAAS(0.0)PT(0.0)PAS(0.0)PAS(0.0)N(0.0)R s:Phosphorylated S ATXN2 140907.9 8 12 176.1 481.52 HUMAN 1 1.5093 17.4334 PSGQQPPSPPSPDEL-p A0A0G2JPP5;S1306-p PSGQQPPSPPSPDEL 0.372553852320375 0.0334530560062588 0.134333333333333 0.311 7.95541670691363 19.8918611996324 0.134333333333333 0.311 0.160124700082269 0.0102521247005739 1.6274256237384 3.85220115004698 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1306.p_SCRIB A0A0G2JPP5_S1306s _1_1_1306_1306 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20032.20241.4 20.92 18.83 2.298 5 1 1 0 836.4014 3262.6124 S1306s TMT10 1292 (K) MAESPCSPSGQQPPsPPSPDELPANVK (Q) MAES(0.0)PCS(0.0)PS(0.0)GQQPPS(0.99)PPS(0.0)PDELPANVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SCRIB 178690.9 20 29 22.1 1004.81 HUMAN 1 7.9554 19.8919 PSGRAYTSPLIDMFN-p Q9UHR4;S295-p PSGRAYTSPLIDMFN 0.598955654669104 0.259145256475395 0.0736666666666667 -0.154333333333333 4.11329834952854 7.72539361758227 0.0736666666666667 -0.154333333333333 0.38785568816414 0.168834283162941 0.938725655957046 -1.58699952609964 Q9UHR4 BAIAP2L1 Q9UHR4.S295.p_BAIAP2L1 Q9UHR4_S295s _1_1_295_295 Q9UHR4 Q9UHR4 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30676.30676.3 15.44 15.44 1.119 5 1 1 0 896.7609 2608.3027 S295s TMT10 292 (R) AYTsPLIDMFNNPATAAPNSQR (V) AY(0.0)T(0.0)S(0.99)PLIDMFNNPAT(0.0)AAPNS(0.0)QR s:Phosphorylated S BAIAP2L1 57224 3 8 661.1 251.53 HUMAN 1 4.1133 -7.7254 PSGSAFGSQENLRWR-p Q96N67-6;S1429-p PSGSAFGSQENLRWR 0.853315044425321 0.160822297671947 -0.0486666666666667 -0.160333333333333 1.33479444101003 10.4373966754522 -0.0486666666666667 -0.160333333333333 0.735394802142677 0.09041913176054 -0.355870803381323 -2.05694120838262 Q96N67 DOCK7 Q96N67.6.S1429.p_DOCK7 Q96N67-6_S1429s _1_1_1429_1429 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3|Q96N67-4 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11040.11040.3 15.6 12.75 4.798 4 1 1 0 582.608 1665.8394 S1429s TMT10 1421 (R) SPSGSAFGsQENLR (W) S(0.0)PS(0.0)GS(0.0)AFGS(0.99)QENLR s:Phosphorylated S DOCK7 243551.1 2 21 345.1 352.4 HUMAN 1 -1.3348 -10.4374 PSGSGAASPTGSAVD-p Q09666;S216-p PSGSGAASPTGSAVD 0.41330138595586 0.268063337259032 0.142 0.108333333333333 7.07897201227547 7.53072235777244 0.142 0.108333333333333 0.195930839264172 0.176574410176701 1.47482988933211 1.5531679562491 Q09666 AHNAK Q09666.S216.p_AHNAK Q09666_S216s _1_1_216_216 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10969.11175.2 21.14 21.14 2.446 5 1 1 0 861.907 1642.8395 S216s Hydrogen 208 (R) LPSGSGAAsPTGSAVDIR (A) LPS(0.0)GS(0.0)GAAS(0.99)PT(0.0)GS(0.0)AVDIR s:Phosphorylated S AHNAK 629603.7 29 9 1.1 4313.36 HUMAN 1 7.079 7.5307 PSGTVCLSILEEDKD-p B0QYN7;S95-p PSGTVCLSILEEDKD 0.763094407024719 0.0599363337436233 -0.0473333333333333 0.264333333333333 2.25023965280012 16.2848777857729 -0.0473333333333334 0.264333333333333 0.59562927455002 0.0235240569119027 -0.563532937965159 3.12082866466748 B0QYN7 UBE2I B0QYN7.S95.p_UBE2I B0QYN7_S95s _1_1_95_95 B0QYN7 B0QYN7|P63279 SUMO-conjugating enzyme UBC9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29407.29407.4 21.87 22.54 3.886 4 1 1 0 986.763 3864.0319 S95s TMT10 75 (K) CKFEPPLFHPNVYPSGTVCLsILEEDK (D) CKFEPPLFHPNVY(0.0)PS(0.0)GT(0.0)VCLS(0.99)ILEEDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UBE2I 20685.4 1 4 3204.1 57.57 HUMAN 1 -2.2502 16.2849 PSGWEEPSPQSISRK-p Q9UPQ9;S879-p PSGWEEPSPQSISRK 0.977130047691108 0.0344070427021607 -0.00433333333333334 0.275333333333333 0.198302858967454 19.7181550473522 -0.00433333333333334 0.275333333333333 0.955365852063947 0.0106704932463482 -0.0586106153477905 3.81521678447849 Q9UPQ9 TNRC6B Q9UPQ9.S879.p_TNRC6B Q9UPQ9_S879s _1_1_879_879 Q9UPQ9 Q9UPQ9|Q9UPQ9-1 Trinucleotide repeat-containing gene 6B protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15886.15886.3 11.02 11.02 4.019 4 1 1 0 746.9982 2159.009 S879s TMT10 869 (K) DEEPSGWEEPsPQSISR (K) DEEPS(0.0)GWEEPS(0.99)PQS(0.0)IS(0.0)R s:Phosphorylated S TNRC6B 194854.6 1 7 865.1 210.19 HUMAN 1 -0.1983 19.7182 PSHGDSKSPGLLSSD-p A0A087X0R0;S797-p PSHGDSKSPGLLSSD 0.325611631944441 0.00272422972588299 -0.376666666666667 0.688 9.12383772696934 38.9334064463529 -0.376666666666667 0.688 0.122353452152951 0.000127837819791928 -1.82980202145795 9.66181905723018 A0A087X0R0 NotFound A0A087X0R0.S797.p_NotFound A0A087X0R0_S797s _1_1_797_797 A0A087X0R0 A0A087X0R0|O15550|F8W8R6|F5H6S1|F5H5V6 Lysine-specific demethylase 6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.34026.34026.3 18.17 18.17 4.187 4 1 1 0 822.7744 2386.3416 S797s TMT10 797 (K) sPGLLSSDNPQLSALLMGK (A) S(0.99)PGLLS(0.0)S(0.0)DNPQLS(0.0)ALLMGK K:TMT10,s:Phosphorylated S KDM6A 159358.2 3 1 2962.1 64.6 HUMAN 1 -9.1238 38.9334 PSHLNGPSSDPEAAF-p Q9H4A3-7;S2424-p PSHLNGPSSDPEAAF 0.761476943047114 0.572500692280055 0.046 -0.0586666666666666 2.26675149276651 3.26499843952678 0.046 -0.0586666666666666 0.593368996519668 0.471520040759339 0.567097949671726 -0.773626966226909 Q9H4A3 WNK1 Q9H4A3.7.S2424.p_WNK1 Q9H4A3-7_S2424sS2425s_2_2_2424_2425 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2|F5GWT4|Q9H4A3-4 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19280.19280.5 23.49 23.49 9.305 5 2 2 0 734.769 3509.8843 S2424s S2425s TMT10 2409 (K) KEKPELSEPSHLNGPssDPEAAFLSR (D) KEKPELS(0.0)EPS(0.0)HLNGPS(0.99)S(0.99)DPEAAFLS(0.0)R K:TMT10,s:Phosphorylated S WNK1 301202.7 10 29 162.1 495.27 HUMAN 1 2.2668 -3.265 PSIASDISLPIATQE-p A0FGR8-6;S782-p PSIASDISLPIATQE 0.862029975440239 0.410964053685273 0.0303333333333333 0.111333333333333 1.26048144640016 5.13787780294334 0.0303333333333333 0.111333333333333 0.74808656518434 0.306346003978967 0.337998958632042 1.12903236823198 A0FGR8 ESYT2 A0FGR8.6.S782.p_ESYT2 A0FGR8-6_S782s _1_1_782_782 A0FGR8-6 A0FGR8-6|A0A087WXU3|A0FGR8-2|A0FGR8-5 Isoform 6 of Extended synaptotagmin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29094.29094.3 24.69 24.69 2.253 5 1 1 0 816.4264 2367.2969 S782s TMT10 772 (K) EPTPSIASDIsLPIATQELR (Q) EPT(0.0)PS(0.0)IAS(0.0)DIS(0.99)LPIAT(0.0)QELR s:Phosphorylated S ESYT2 105219.8 2 6 1886.1 109.02 HUMAN 1 1.2605 5.1379 PSIATIKSLADCNFS-p Q6R327-3;S1313-p PSIATIKSLADCNFS 0.735232935868727 0.00488322175391975 -0.0883333333333333 0.582333333333333 2.52959334559504 33.7608518898007 -0.0883333333333334 0.582333333333333 0.558522489897615 0.00042064410889856 -0.623133583706585 7.64899063672161 Q6R327 RICTOR Q6R327.3.S1313.p_RICTOR Q6R327-3_S1313s _1_1_1313_1313 Q6R327-3 Q6R327-3 Isoform 3 of Rapamycin-insensitive companion of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14553.14553.2 13.94 13.94 13.94 6 1 1 0 908.8917 1736.8111 S1313s TMT10 1313 (K) sLADCNFSYTSSR (D) S(0.99)LADCNFS(0.0)Y(0.0)T(0.0)S(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S RICTOR 197118.3 1 16 452.1 308.36 HUMAN 1 -2.5296 33.7609 PSIIRSGSPKLDPSE-p Q5TCQ9;S724-p PSIIRSGSPKLDPSE 0.939054836224484 0.591615966879008 -0.014 0.0753333333333333 0.534144076822058 3.08470004170089 -0.014 0.0753333333333334 0.88427142742011 0.491507326430798 -0.152561510462724 0.737458751223157 Q5TCQ9 MAGI3 Q5TCQ9.S724.p_MAGI3 Q5TCQ9_S724s _1_1_724_724 Q5TCQ9 Q5TCQ9|Q5TCQ9-4|Q5TCQ9-2|Q5TCQ9-3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19907.19907.3 15.93 10.92 2.083 4 1 1 0 763.0901 2207.289 S724s TMT10 722 (R) SGsPKLDPSEVYLK (S) S(0.0)GS(0.99)PKLDPS(0.0)EVY(0.0)LK K:TMT10,s:Phosphorylated S MAGI3 166517.7 5 5 1019.1 188.04 HUMAN 1 -0.5341 3.0847 PSIPEVASDDERIDQ-p Q6WKZ4;S967-p PSIPEVASDDERIDQ 0.654253083415848 0.140717506198093 -0.0653333333333333 0.158333333333333 3.45361003418832 11.2216834379482 -0.0653333333333334 0.158333333333333 0.451480499211212 0.0754799591072129 -0.811131315764316 2.19398059640107 Q6WKZ4 RAB11FIP1 Q6WKZ4.S967.p_RAB11FIP1 Q6WKZ4_S967s _1_1_967_967 Q6WKZ4 Q6WKZ4|Q6WKZ4-1 Rab11 family-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.35552.35757.3 22.21 19.06 1.78 4 1 1 0 926.7875 2698.3807 S967s TMT10 949 (K) SPIMADLNLSLPSIPEVAsDDER (I) S(0.0)PIMADLNLS(0.0)LPS(0.0)IPEVAS(0.99)DDER s:Phosphorylated S RAB11FIP1 137564.1 7 19 56.1 721.17 HUMAN 1 -3.4536 11.2217 PSIPVGKSPMVEQAV-p Q9BX40-3;S110-p PSIPVGKSPMVEQAV 0.417208186166494 0.00633361180202018 -0.109 -0.498666666666667 7.00835814301417 31.656094462243 -0.109 -0.498666666666667 0.199142605838709 0.000682952585925529 -1.46247618186986 -6.94044434545932 Q9BX40 LSM14B Q9BX40.3.S110.p_LSM14B Q9BX40-3_S110s _1_1_110_110 Q9BX40-3 Q9BX40-3 Isoform 3 of Protein LSM14 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25734.25734.4 24.05 24.05 5.341 4 1 1 0 935.2441 3657.9877 S110s TMT10 99 (R) GAGFPSIPVGKsPMVEQAVQTGSADNLNAK (K) GAGFPS(0.0)IPVGKS(0.99)PMVEQAVQT(0.0)GS(0.0)ADNLNAK K:TMT10,s:Phosphorylated S LSM14B 26132.8 5 12 1596.2 128.9 HUMAN 1 -7.0084 -31.6561 PSIVQALSLYDGLV_-p P62166;S184-p PSIVQALSLYDGLV_ 0.881297316055286 0.190705393825795 0.023 0.154 1.07879560227937 9.46405499160224 0.023 0.154 0.780046405201897 0.113134353863528 0.293528340443056 1.88801116985517 P62166 NCS1 P62166.S184.p_NCS1 P62166_S184s _1_1_184_184 P62166 P62166|P62166-2 Neuronal calcium sensor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37300.37300.2 7.68 7.68 2.099 3 1 1 0 985.5106 1890.0422 S184s TMT10 175 (K) ADPSIVQALsLYDGLV (-) ADPS(0.0)IVQALS(0.99)LY(0.0)DGLV s:Phosphorylated S NCS1 21935.4 1 1 7109.1 7.68 HUMAN 1 1.0788 9.4641 PSKARSVSPPPKRAT-p Q13247;S316-p PSKARSVSPPPKRAT 0.271709690894866 0.300499631432869 0.506 -0.247 10.7243496414946 6.8924366575302 0.506 -0.247 0.0846379305109422 0.204529677822264 2.10788481862743 -1.44177915995301 Q13247 SRSF6 Q13247.S316.p_SRSF6 Q13247_S316s _1_1_316_316 Q13247 Q13247 Serine/arginine-rich splicing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6138.6344.3 12.11 8.22 2.444 2 1 1 0 469.2707 1325.8305 S316s TMT10 314 (R) SVsPPPKR (A) S(0.0)VS(0.99)PPPKR K:TMT10,s:Phosphorylated S SRSF6 39700.2 7 27 743.1 233.79 HUMAN 1 10.7243 -6.8924 PSKENESSDSEEEVS-p Q6KC79;S2491-p PSKENESSDSEEEVS 0.255498822846135 0.0296855856884825 -0.259333333333333 0.610666666666667 11.2681650886569 20.6733152151592 -0.259333333333333 0.610666666666667 0.0746764202592899 0.00856383869460072 -2.20315789703801 4.02103893766363 Q6KC79 NIPBL Q6KC79.S2491.p_NIPBL Q6KC79_S2490sS2491sS2493s_3_3_2490_2493 Q6KC79 Q6KC79|Q6KC79-2 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5016.5430.3 9.35 9.35 9.353 4 3 3 0 740.2761 1978.9151 S2490s S2491s S2493s TMT10 2487 (K) ENEssDsEEEVSRPR (K) ENES(0.99)S(0.99)DS(0.99)EEEVS(0.0)RPR s:Phosphorylated S NIPBL 318099.5 1 39 50.1 752.87 HUMAN 1 -11.2682 20.6733 PSKERTLSADASVNT-p Q92615;S568-p PSKERTLSADASVNT 0.292613107484573 0.0571606217843465 0.312333333333333 -0.359 10.0676240205755 16.5618438490055 0.312333333333333 -0.359 0.0984549595173209 0.0220706749725401 1.99346155701085 -3.17448606064327 Q92615 LARP4B Q92615.S568.p_LARP4B Q92615_S568s _1_1_568_568 Q92615 Q92615 La-related protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22846.22846.3 25.25 24 1.148 10 1 1 0 1171.9033 3433.7268 S568s Hydrogen 566 (R) TLsADASVNTLPVVVSREPSVPASCAVSATYER (S) T(0.0)LS(0.99)ADAS(0.0)VNT(0.0)LPVVVS(0.0)REPS(0.0)VPAS(0.0)CAVS(0.0)AT(0.0)Y(0.0)ER C:Carbamidomethylation,s:Phosphorylated S LARP4B 80949.9 4 7 332.1 357.69 HUMAN 1 10.0676 -16.5618 PSKRPPISDSEELSA-p P42568;S288-p PSKRPPISDSEELSA 0.518485864110033 0.099232634094393 -0.172666666666667 0.185333333333333 5.27119054694447 13.2588298983896 -0.172666666666667 0.185333333333333 0.297085150998467 0.0472190244386071 -1.15353106626721 2.55637687175785 P42568 MLLT3 P42568.S288.p_MLLT3 P42568_S288s _1_1_288_288 P42568 P42568|P42568-2 Protein AF-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13340.13340.4 11.71 11.71 1.54 3 1 1 0 581.8281 2244.3167 S288s TMT10 284 (K) RPPIsDSEELSAKK (R) RPPIS(0.99)DS(0.0)EELS(0.0)AKK K:TMT10,s:Phosphorylated S MLLT3 63692.6 2 1 2734.1 72.29 HUMAN 1 -5.2712 13.2588 PSKRQRVSGNTSRRG-p P07910-2;S149-p PSKRQRVSGNTSRRG 0.06600969777365 0.00357287195344666 0.667333333333333 -0.979333333333333 25.4234316197581 36.4644647385978 0.667333333333333 -0.979333333333334 0.00286851310299802 0.000225711416427318 5.1518246023351 -8.64928916218112 P07910 HNRNPC P07910.2.S149.p_HNRNPC P07910-2_S149s _1_1_149_149 P07910-2 P07910|G3V2Q1|P07910-2|G3V4C1|B2R5W2|B4DY08|G3V576|P07910-3 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3085.3085.3 8.56 8.56 2.453 3 1 1 0 438.5555 1233.6861 S149s TMT10 146 (R) QRVsGNTSR (R) QRVS(0.99)GNT(0.0)S(0.0)R s:Phosphorylated S HNRNPC 32394 2 14 261.1 397.39 HUMAN 1 25.4234 -36.4645 PSKTQTMSPHIKSVD-p Q9H1N7;S56-p PSKTQTMSPHIKSVD 0.324195658268258 0.571841623065093 -0.21 -0.087 9.16126422757979 3.27167782930175 -0.21 -0.087 0.121303568539788 0.470795406762526 -1.83628217801745 -0.774958480301061 Q9H1N7 SLC35B3 Q9H1N7.S56.p_SLC35B3 Q9H1N7_S56s _1_1_56_56 Q9H1N7 Q9H1N7|Q9H1N7-3|Q9H1N7-2 Adenosine 3'-phospho 5'-phosphosulfate transporter 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9945.9945.3 8.74 8.74 1.228 3 1 1 0 527.6147 1500.8609 S56s TMT10 52 (K) TQTMsPHIK (S) T(0.0)QT(0.0)MS(0.99)PHIK K:TMT10,s:Phosphorylated S SLC35B3 45105.3 1 1 6908.1 8.74 HUMAN 1 -9.1613 -3.2717 PSKVECGSDPEENSA-p P10827;S12-p PSKVECGSDPEENSA 0.702883247704392 0.17868052360167 -0.055 0.199 2.87761527988852 9.83897520190485 -0.055 0.199 0.515511635399744 0.103777326871068 -0.695443040182735 1.95297258339441 P10827 THRA P10827.S12.p_THRA P10827_S12s _1_1_12_12 P10827 P10827|P10827-3|P10827-4|P10827-2 Thyroid hormone receptor alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9733.9733.3 14.91 11.21 4.013 3 1 1 0 953.442 2778.3439 S12s Acetyl 1 (-) MEQKPSKVECGsDPEENSAR (S) MEQKPS(0.0)KVECGS(0.99)DPEENS(0.0)AR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S THRA 55898.6 2 1 4739.1 27.25 HUMAN 1 -2.8776 9.839 PSLATDKS_______-p Q9H3N1;S280-p PSLATDKS_______ 0.204713889706557 0.0394715177540044 -0.189666666666667 -0.279666666666667 13.3291287315846 18.8308402167921 -0.189666666666667 -0.279666666666667 0.0464608474216512 0.013089286639133 -2.57054676745413 -3.62926143785875 Q9H3N1 TMX1 Q9H3N1.S280.p_TMX1 Q9H3N1_S280s _1_1_280_280 Q9H3N1 Q9H3N1 Thioredoxin-related transmembrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16507.16507.3 15.98 12.33 4.463 4 1 1 0 538.6228 1533.8888 S280s TMT10 270 (R) SLGPSLATDKs (-) S(0.0)LGPS(0.0)LAT(0.0)DKS(0.99) K:TMT10,s:Phosphorylated S TMX1 32190 2 5 695.1 242.17 HUMAN 1 -13.3291 -18.8308 PSLCISDSEEEEEER-p O43159;S64-p PSLCISDSEEEEEER 0.960230191181073 0.0230438100338413 0.008 0.306666666666667 0.340512039437543 22.3542221841402 0.00799999999999999 0.306666666666667 0.924589157120923 0.00581537575617853 0.0991494509508172 4.39865603218085 O43159 RRP8 O43159.S64.p_RRP8 O43159_S62sS64s_2_2_62_64 O43159 O43159|E9PPY3 Ribosomal RNA-processing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18675.18675.5 19.53 12.09 17.133 5 2 2 0 804.1899 3856.9842 S62s S64s TMT10 46 (R) ALEAASLSQHPPSLCIsDsEEEEEERKK (K) ALEAAS(0.0)LS(0.0)QHPPS(0.0)LCIS(0.99)DS(0.99)EEEEEERKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RRP8 51455.6 9 7 986.1 191.95 HUMAN 1 0.3405 22.3542 PSLDRAASPVLLSSN-p P41970;S396-p PSLDRAASPVLLSSN 0.365498843349433 0.0173489515285819 -0.13 -0.386666666666667 8.11622964777709 24.2872860470071 -0.13 -0.386666666666667 0.154303947011189 0.00372624490569775 -1.65531752860851 -4.85966234654341 P41970 ELK3 P41970.S396.p_ELK3 P41970_S396s _1_1_396_396 P41970 P41970 ETS domain-containing protein Elk-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15509.15509.3 8.66 8.66 8.655 5 1 1 0 643.0156 1847.0638 S396s TMT10 394 (R) AAsPVLLSSNSQKS (-) AAS(0.99)PVLLS(0.0)S(0.0)NS(0.0)QKS(0.0) K:TMT10,s:Phosphorylated S ELK3 44410 1 1 6922.1 8.66 HUMAN 1 -8.1162 -24.2873 PSLDSGDSDSEELPT-p Q96AY2-2;S15-p PSLDSGDSDSEELPT 0.222622105942702 0.751582701181189 0.183333333333333 0.033 12.5507037820202 1.71311647323358 0.183333333333333 0.033 0.0555814179284375 0.67404416373776 2.43041250172791 0.444239768370942 Q96AY2 EME1 Q96AY2.2.S15.p_EME1 Q96AY2-2_S15s _1_1_15_15 Q96AY2-2 Q96AY2-2|D6RIT8 Isoform 2 of Crossover junction endonuclease EME1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30027.30027.4 23.1 17.44 1.572 7 1 1 0 806.9107 3144.6556 S15s TMT10 6 (K) SSPSLDSGDsDSEELPTFAFLKK (E) S(0.0)S(0.0)PS(0.0)LDS(0.0)GDS(0.99)DS(0.0)EELPT(0.0)FAFLKK K:TMT10,s:Phosphorylated S EME1 65747.5 9 2 1591.1 129.29 HUMAN 1 12.5507 1.7131 PSLEHRDSPWHRGPA-p Q96PE2;S2011-p PSLEHRDSPWHRGPA 0.221793322624617 0.399788562142374 -0.359 0.122333333333333 12.5908541046817 5.2956019616648 -0.359 0.122333333333333 0.0550699382532077 0.295419938798951 -2.43759573416434 1.15771743362475 Q96PE2 ARHGEF17 Q96PE2.S2011.p_ARHGEF17 Q96PE2_S2011s _1_1_2011_2011 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11397.11397.4 15.66 15.66 1.985 2 1 1 0 485.4937 1858.9874 S2011s TMT10 2003 (K) LPSLEHRDsPWHR (G) LPS(0.0)LEHRDS(0.99)PWHR s:Phosphorylated S ARHGEF17 223779.6 1 40 30.1 908.19 HUMAN 1 -12.5909 5.2956 PSLKQPDSPRSISSE-p Q9HCE3;S334-p PSLKQPDSPRSISSE 0.25567774491366 0.203092706603171 -0.213666666666667 0.212333333333333 11.2570943713788 9.1056657952979 -0.213666666666667 0.212333333333333 0.0748670227595467 0.122866481164022 -2.20121279408668 1.8259905080697 Q9HCE3 ZNF532 Q9HCE3.S334.p_ZNF532 Q9HCE3_S334s _1_1_334_334 Q9HCE3 Q9HCE3 Zinc finger protein 532 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14293.14293.5 18.17 18.17 1.892 5 1 1 0 704.5941 3438.9726 S334s TMT10 314 (K) SPESQNLIDGTKKPSLKQPDsPR (S) S(0.0)PES(0.0)QNLIDGT(0.0)KKPS(0.0)LKQPDS(0.99)PR K:TMT10,s:Phosphorylated S ZNF532 144089.8 9 5 397.1 329.01 HUMAN 1 -11.2571 9.1057 PSLNDSDSEIEDISE-p A0A1B0GTW1;S459-p PSLNDSDSEIEDISE 0.926738193761809 0.0764273734992379 0.016 0.199666666666667 0.652748878720243 14.8191828181159 0.016 0.199666666666667 0.860448956283591 0.032967173839225 0.184352484751218 2.84277939017683 A0A1B0GTW1 NotFound A0A1B0GTW1.S459.p_NotFound A0A1B0GTW1_S457sS459s_2_2_457_459 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33458.33458.4 20.28 20.28 1.332 7 2 2 0 913.4122 3490.687 S457s S459s TMT10 443 (R) DSQQTLINIPSLNDsDsEIEDISEIESNR (S) DS(0.0)QQT(0.0)LINIPS(0.0)LNDS(0.99)DS(0.99)EIEDIS(0.0)EIES(0.0)NR s:Phosphorylated S TJP2 141123.7 7 33 41.1 827.72 HUMAN 1 0.6527 14.8192 PSLNSAPSPFNPQGQ-p Q13950;S275-p PSLNSAPSPFNPQGQ 0.600598442473182 0.637090483195626 -0.0723333333333333 -0.0776666666666667 4.09078067548095 2.66457574415596 -0.0723333333333334 -0.0776666666666667 0.389871898107233 0.541430136807103 -0.934443105445959 -0.651333973968342 Q13950 RUNX2 Q13950.S275.p_RUNX2 Q13950_S275s_1_1_275_275 Q13950 I3L0L0|Q13950|Q13950-2|Q13950-3 Runt-related transcription factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18460.18460.4 13.94 10.75 3.292 5 1 1 0 898.9525 3511.8243 S275s N278n TMT10 259 (R) VGVPPQNPRPSLNSAPsPFnPQGQSQITDPR (Q) VGVPPQN(0.0)PRPS(0.0)LN(0.0)S(0.0)APS(0.99)PFN(0.99)PQGQS(0.0)QIT(0.0)DPR s:Phosphorylated S,n:Deamidated RUNX2 56932.1 1 2 4053.1 38.52 HUMAN 1 -4.0908 -2.6646 PSLPKAESCGSFDET-p A8MXB7;S146-p PSLPKAESCGSFDET 0.236719836335398 0.0196344528580471 -0.461666666666667 0.342 11.989525935197 23.4342391075135 -0.461666666666667 0.342 0.0632480887612179 0.00453498744692502 -2.33047691217521 4.65249955330428 A8MXB7 SNX24 A8MXB7.S146.p_SNX24 A8MXB7_S146sS149s_2_2_146_149 A8MXB7 A8MXB7|Q9Y343|Q9Y343-2 Sorting nexin-24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11950.11950.2 13.34 13.34 4.537 6 2 2 0 1248.9938 2337.044 S146s S149s TMT10 144 (K) AEsCGsFDETESEESSK (L) AES(0.99)CGS(0.99)FDET(0.0)ES(0.0)EES(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SNX24 23842.1 4 2 4034.1 38.84 HUMAN 1 -11.9895 23.4342 PSLQRSVSVATGLNM-p Q9UHR4;S331-p PSLQRSVSVATGLNM 0.186383959438458 0.00967265628027221 -0.348333333333333 -0.541 14.3396215019678 28.3872488034446 -0.348333333333333 -0.541 0.0368161058361502 0.00144968992159737 -2.75548962431952 -5.94729115307194 Q9UHR4 BAIAP2L1 Q9UHR4.S331.p_BAIAP2L1 Q9UHR4_S331s _1_1_331_331 Q9UHR4 Q9UHR4 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22305.22305.3 18.88 18.88 2.79 3 1 1 0 711.731 2053.2117 S331s TMT10 329 (R) SVsVATGLNMMKK (Q) S(0.0)VS(0.99)VAT(0.0)GLNMMKK K:TMT10,s:Phosphorylated S BAIAP2L1 57224 13 9 661.1 251.53 HUMAN 1 -14.3396 -28.3872 PSLRGSHSFDERMTG-p P31629;S565-p PSLRGSHSFDERMTG 0.790053523868569 0.495359839506351 -0.0843333333333333 0.121 1.97403206994357 4.07999476886859 -0.0843333333333334 0.121 0.634741352645694 0.390841366565438 -0.503043545793002 0.932229884498109 P31629 HIVEP2 P31629.S565.p_HIVEP2 P31629_S565s _1_1_565_565 P31629 P31629 Transcription factor HIVEP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4484.4484.3 12.2 12.2 2.122 2 1 1 0 415.1819 1163.5643 S565s TMT10 562 (R) GSHsFDER (M) GS(0.0)HS(0.99)FDER s:Phosphorylated S HIVEP2 271273.5 2 4 465.2 303.46 HUMAN 1 -1.974 4.08 PSLRWDETPGRAKGS-p O75533;T235-p PSLRWDETPGRAKGS 0.469931060229711 0.0424125919730993 0.099 0.250333333333333 6.05670762691108 18.3858045239042 0.099 0.250333333333333 0.247930089574422 0.0145017210724951 1.2946592924011 3.5377949703143 O75533 SF3B1 O75533.T235.p_SF3B1 O75533_T235t _1_1_235_235 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16224.16224.5 17.12 14.64 1.132 6 1 1 0 764.3995 3737.9967 T235t TMT10 214 (K) KLSSWDQAETPGHTPSLRWDEtPGRAK (G) KLS(0.0)S(0.0)WDQAET(0.0)PGHT(0.0)PS(0.0)LRWDET(0.99)PGRAK K:TMT10,t:Phosphorylated T SF3B1 146569.5 9 12 53.1 735.77 HUMAN 1 6.0567 18.3858 PSLSAGVSPKRRALP-p Q8TEK3;S1104-p PSLSAGVSPKRRALP 0.977130047691108 0.0166922106200809 -0.00166666666666667 -0.342333333333333 0.196998261992417 24.5432888783922 -0.00501128089854093 -0.342333333333333 0.955652881872599 0.00351294307319277 -0.0582332001258615 -4.92302939433733 Q8TEK3 DOT1L Q8TEK3.S1104.p_DOT1L Q8TEK3_S1104s _1_1_1104_1104 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10761.10761.3 21.1 15.26 5.529 5 1 1 0 675.3707 1944.1278 S1104s TMT10 1091 (K) RASAGTPSLSAGVsPK (R) RAS(0.0)AGT(0.0)PS(0.0)LS(0.0)AGVS(0.99)PK K:TMT10,s:Phosphorylated S DOT1L 185648.6 8 19 132.1 534.85 HUMAN 1 -0.197 -24.5433 PSLSGSKSPCPQEKS-p Q9UQ35;S1014-p PSLSGSKSPCPQEKS 0.916582629174307 0.120357120192547 -0.0156666666666667 0.181333333333333 0.738187271128844 12.1241153450592 -0.0156666666666667 0.181333333333333 0.843686836000623 0.061318068392241 -0.20685144527843 2.35318024099542 Q9UQ35 SRRM2 Q9UQ35.S1014.p_SRRM2 Q9UQ35_S1014s _1_1_1014_1014 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12372.12597.3 14.77 10 1.135 5 1 1 0 940.8229 2740.4907 S1014s TMT10 1001 (K) AQTPPGPSLSGSKsPCPQEK (S) AQT(0.0)PPGPS(0.0)LS(0.0)GS(0.0)KS(0.99)PCPQEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SRRM2 300351.7 4 49 2.1 3310.34 HUMAN 1 -0.7382 12.1241 PSLSKTDSYKRLHPE-p Q9NR09;S4023-p PSLSKTDSYKRLHPE 0.981612148640369 0.00234850053989814 -0.00733333333333336 -0.867333333333333 0.159563903794866 40.4025661879573 -0.00733333333333335 -0.867333333333334 0.963925811241847 9.11472103541007e-05 -0.0473590990617707 -10.3139243045798 Q9NR09 BIRC6 Q9NR09.S4023.p_BIRC6 Q9NR09_S4023s _1_1_4023_4023 Q9NR09 Q9NR09 Baculoviral IAP repeat-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18243.18243.3 14.1 11.94 1.211 6 1 1 0 774.4241 2241.2945 S4023s TMT10 4012 (R) VITDPSLSKTDsYK (R) VIT(0.0)DPS(0.0)LS(0.0)KT(0.0)DS(0.99)Y(0.0)K K:TMT10,s:Phosphorylated S BIRC6 536521.4 3 11 1201.1 166.97 HUMAN 1 -0.1596 -40.4026 PSLSQGVSVDEKLMP-p O60934;S347-p PSLSQGVSVDEKLMP 0.392777823777633 0.0760609057954967 0.116 0.204666666666667 7.48450389659229 14.8501166624771 0.116 0.204666666666667 0.178463583947374 0.032733190179834 1.54558447787486 2.84855135568986 O60934 NBN O60934.S347.p_NBN O60934_S347s _1_1_347_347 O60934 O60934|A0A0C4DG07 Nibrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16059.16059.3 18.71 18.71 4.364 6 1 1 0 747.7194 2161.1753 S347s TMT10 335 (K) TTTPGPSLSQGVsVDEK (L) T(0.0)T(0.0)T(0.0)PGPS(0.0)LS(0.0)QGVS(0.99)VDEK K:TMT10,s:Phosphorylated S NBN 85642.2 2 5 562.1 271.59 HUMAN 1 7.4845 14.8501 PSLSRCSTPLLHQQY-p Q9HCK8;T1982-p PSLSRCSTPLLHQQY 0.260222525156383 0.00844515777214221 0.198 0.449666666666667 11.0919962765928 29.4402337027888 0.198 0.449666666666667 0.0777679001195547 0.00113756606940759 2.17223418699078 6.25393471452429 Q9HCK8 CHD8 Q9HCK8.T1982.p_CHD8 Q9HCK8_T1982t _1_1_1982_1982 Q9HCK8 Q9HCK8|Q9HCK8-2 Chromodomain-helicase-DNA-binding protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9869.9869.2 12.1 6.92 1.36 5 1 1 0 950.4534 1819.9322 T1982t TMT10 1980 (R) CStPLLHQQYTSR (T) CS(0.0)T(0.99)PLLHQQY(0.0)T(0.0)S(0.0)R C:Carbamidomethylation,t:Phosphorylated T CHD8 292339.6 2 4 419.1 320.67 HUMAN 1 11.092 29.4402 PSNEEDDSDDDDVLA-p Q9H6Z4-3;S471-p PSNEEDDSDDDDVLA 0.155383792532697 0.0415389477499685 0.256666666666667 0.362333333333333 16.2448152550306 18.518158904769 0.256666666666667 0.362333333333333 0.02374206417194 0.0140664371318612 3.11533960810654 3.56487540331733 Q9H6Z4 RANBP3 Q9H6Z4.3.S471.p_RANBP3 Q9H6Z4-3_S471s _1_1_471_471 Q9H6Z4-3 Q9H6Z4|Q9H6Z4-2|Q9H6Z4-3|B7Z7F3 Isoform 3 of Ran-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17892.17892.4 26.1 26.1 1.417 8 1 1 0 1374.8285 5416.3364 S471s Hydrogen 447 (R) VEQEQEAKMPAPEPGAAPSNEEDDsDDDDVLAPSGATAAGAGDEGDGQTTGST (-) VEQEQEAKMPAPEPGAAPS(0.0)NEEDDS(0.99)DDDDVLAPS(0.0)GAT(0.0)AAGAGDEGDGQT(0.0)T(0.0)GS(0.0)T(0.0) K:TMT10-Lys-Only,s:Phosphorylated S RANBP3 53752.1 9 14 444.1 311.24 HUMAN 1 16.2448 18.5182 PSNELLGSFEAAKSC-p Q6ZMY3;S805-p PSNELLGSFEAAKSC 0.173995878042497 0.159121874454654 -0.288666666666667 0.281666666666667 15.1247558011449 10.5028352694456 -0.288666666666667 0.281666666666667 0.0307273013653609 0.0890669279377043 -2.90188214326067 2.06833757965208 Q6ZMY3 SPOCD1 Q6ZMY3.S805.p_SPOCD1 Q6ZMY3_S805s_1_1_805_805 Q6ZMY3 Q6ZMY3|Q6ZMY3-2|Q6ZMY3-3|E9PPM7 SPOC domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27808.27808.3 8.66 8.66 1.157 2 1 1 0 778.0485 2251.1647 N800n S805s TMT10 795 (K) DWEPSnELLGsFEAAK (S) DWEPS(0.0)N(1.0)ELLGS(0.99)FEAAK K:TMT10,n:Deamidated,s:Phosphorylated S SPOCD1 132021.7 1 4 2060.1 100.05 HUMAN 1 -15.1248 10.5028 PSNLFVPTPDAEEPQ-p J3KNL6;T2231-p PSNLFVPTPDAEEPQ 0.971789296650263 0.93010231287797 -0.00533333333333335 -0.00899999999999999 0.240761912267815 0.444264622989653 -0.00533333333333335 -0.009 0.946071171123067 0.902762556437534 -0.0708378883928668 -0.128000023321355 J3KNL6 SEC16A J3KNL6.T2231.p_SEC16A J3KNL6_T2231t _1_1_2231_2231 J3KNL6 J3KNL6|O15027|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.37771.37771.5 27.96 23.7 4.126 4 1 1 0 904.0644 4436.3227 T2231t TMT10 2205 (R) SEPALAPADFVAPLAPLPIPSNLFVPtPDAEEPQLPDGTGR (E) S(0.0)EPALAPADFVAPLAPLPIPS(0.0)NLFVPT(0.99)PDAEEPQLPDGT(0.0)GR t:Phosphorylated T SEC16A 253486.5 6 44 15.1 1143.82 HUMAN 1 -0.2408 -0.4443 PSNPVAASPRFHLVS-p Q8ND82;S105-p PSNPVAASPRFHLVS 0.973878737819682 0.0584025953292132 -0.00566666666666667 -0.330333333333333 0.225498157531176 16.4339905228459 -0.00566666666666665 -0.330333333333333 0.949402091779274 0.0227300791343294 -0.0664546902336031 -3.14967012393417 Q8ND82 ZNF280C Q8ND82.S105.p_ZNF280C Q8ND82_S105s _1_1_105_105 Q8ND82 Q8ND82 Zinc finger protein 280C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5658.5658.3 16.36 12.25 8.317 2 1 1 0 611.6279 1752.9013 S105s TMT10 94 (R) CRDPPSNPVAAsPR (F) CRDPPS(0.0)NPVAAS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S ZNF280C 84920.2 1 2 1894.1 108.64 HUMAN 1 -0.2255 -16.434 PSNRLNDSPTLKKLD-p Q9BYW2;S624-p PSNRLNDSPTLKKLD 0.72028620456719 0.435330565213081 0.0653333333333333 -0.074 2.69031058496132 4.81272829984642 0.0653333333333333 -0.074 0.53823128962061 0.330162063358575 0.656777020876549 -1.06941582491765 Q9BYW2 SETD2 Q9BYW2.S624.p_SETD2 Q9BYW2_S624s _1_1_624_624 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10777.10777.3 13.64 13.64 1.575 4 1 1 0 755.0662 2183.2185 S624s TMT10 612 (K) AGSPAPSNRLNDsPTLK (K) AGS(0.0)PAPS(0.0)NRLNDS(0.99)PT(0.0)LK K:TMT10,s:Phosphorylated S SETD2 290615.4 7 8 58.1 711.11 HUMAN 1 2.6903 -4.8127 PSNVGAGSLDISKSL-p Q5FWE3;S747-p PSNVGAGSLDISKSL 0.26463240481466 0.084241721379719 0.161 0.240666666666667 10.9531454434488 14.2250913736204 0.161 0.240666666666667 0.0802944366940582 0.0377999184284044 2.1479028134594 2.73266872720595 Q5FWE3 PRRT3 Q5FWE3.S747.p_PRRT3 Q5FWE3_S747s _1_1_747_747 Q5FWE3 Q5FWE3|Q5FWE3-2 Proline-rich transmembrane protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16427.16427.4 20.09 19.14 4.704 5 1 1 0 814.8975 3176.6046 S747s TMT10 727 (K) SEVPERPNNCYAGPSNVGAGsLDISK (S) S(0.0)EVPERPNNCY(0.0)AGPS(0.0)NVGAGS(0.99)LDIS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRRT3 102765.9 1 1 931.1 199.28 HUMAN 1 10.9531 14.2251 PSPAPRRSPAGNKQA-p A0A1B0GV68;S433-p PSPAPRRSPAGNKQA 0.283177951218012 0.200650835602568 0.220666666666667 0.260333333333333 10.3532451235413 9.17766170887903 0.220666666666667 0.260333333333333 0.0921882323302728 0.120846431097439 2.04315363257768 1.83844576374481 A0A1B0GV68 NotFound A0A1B0GV68.S433.p_NotFound A0A1B0GV68_S433s _1_1_433_433 A0A1B0GV68 Q9Y4F1-2|C9JME2|A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4296.4296.4 15.02 14.81 1.158 4 1 1 0 674.3511 2614.4214 S433s TMT10 417 (K) VSAGEPGSHPSPAPRRsPAGNK (Q) VS(0.0)AGEPGS(0.0)HPS(0.0)PAPRRS(0.99)PAGNK K:TMT10,s:Phosphorylated S FARP1 88555.5 4 9 147.1 514.5 HUMAN 1 10.3532 9.1777 PSPAPTPSPTPVEDL-p A0A0G2JPP5;S1547-p PSPAPTPSPTPVEDL 0.572577112843414 0.117699587557925 0.0806666666666667 0.183666666666667 4.45996950402732 12.2531299556656 0.0806666666666667 0.183666666666667 0.358098951649322 0.0595233005120439 1.00409377482076 2.37609979152241 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1547.p_SCRIB A0A0G2JPP5_S1547s _1_1_1547_1547 A0A0G2JPP5 Q14160-3|A0A0G2JPP5 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24138.24138.4 26.6 26.6 2.936 9 1 1 0 998.5273 3911.1166 S1547s TMT10 1536 (R) LAEAPSPAPTPsPTPVEDLGPQTSTSPGRLPLSGK (K) LAEAPS(0.0)PAPT(0.0)PS(0.99)PT(0.0)PVEDLGPQT(0.0)S(0.0)T(0.0)S(0.0)PGRLPLS(0.0)GK K:TMT10,s:Phosphorylated S SCRIB 178690.9 6 40 22.1 1004.81 HUMAN 1 4.46 12.2531 PSPCASPSPPSSGKG-p Q9H6S0;S1269-p PSPCASPSPPSSGKG 0.0814271128817194 0.291338980704966 0.470666666666667 0.131 23.2606976238514 7.06965276548297 0.470666666666667 0.131 0.00471987218060233 0.196351726103472 4.61632800667921 1.47278917279078 Q9H6S0 YTHDC2 Q9H6S0.S1269.p_YTHDC2 Q9H6S0_S1269s _1_1_1269_1269 Q9H6S0 Q9H6S0 Probable ATP-dependent RNA helicase YTHDC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11106.11106.3 17.17 17.17 1.128 11 1 1 0 874.4001 2541.2179 S1269s TMT10 1255 (K) STDSSSYPSPCASPsPPSSGK (G) S(0.0)T(0.0)DS(0.0)S(0.0)S(0.0)Y(0.0)PS(0.0)PCAS(0.0)PS(0.99)PPS(0.0)S(0.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S YTHDC2 161671.9 3 13 668.1 249.65 HUMAN 1 23.2607 7.0697 PSPCKSKSLGDLTSE-p Q4KWH8;S1494-p PSPCKSKSLGDLTSE 0.809924688163494 0.380728624405919 -0.0376666666666667 -0.105333333333333 1.76025091032477 5.57312120501626 -0.0376666666666667 -0.105333333333333 0.666768246073905 0.277132767987387 -0.455028028326662 -1.20785776722396 Q4KWH8 PLCH1 Q4KWH8.S1494.p_PLCH1 Q4KWH8_S1494s _1_1_1494_1494 Q4KWH8 Q4KWH8|Q4KWH8-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26845.26845.4 22.14 15.68 4.47 4 1 1 0 606.7912 2344.1743 S1494s TMT10 1494 (K) sLGDLTSEDIACNFESK (Y) S(0.99)LGDLT(0.0)S(0.0)EDIACNFES(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PLCH1 191330.6 9 16 201.1 451.38 HUMAN 1 -1.7603 -5.5731 PSPDGASSDAEPEPP-p Q9NTJ3;S28-p PSPDGASSDAEPEPP 0.414715625274144 0.119307547564754 0.128 0.258166666666667 7.05221322271387 12.1774354748372 0.128 0.258166666666667 0.197141781921264 0.0605698436365405 1.47014980160352 2.36264734320973 Q9NTJ3 SMC4 Q9NTJ3.S28.p_SMC4 Q9NTJ3_S27sS28s_2_2_27_28 Q9NTJ3 Q9NTJ3|E9PD53|Q9NTJ3-2|F8WCB7 Structural maintenance of chromosomes protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8461.8461.3 14.28 12.9 2.118 4 2 2 0 840.3271 2359.0321 S27s S28s Hydrogen 15 (R) EEGPPPPSPDGAssDAEPEPPSGR (T) EEGPPPPS(0.0)PDGAS(0.99)S(0.99)DAEPEPPS(0.0)GR s:Phosphorylated S SMC4 147864 16 7 902.1 203.59 HUMAN 2 7.0522 12.1774 PSPEEPPSPSAPSIA-p Q12802-2;S2713-p PSPEEPPSPSAPSIA 0.239058752750785 0.0171004325308132 -0.186333333333333 -0.498666666666667 11.8817090987982 24.3761123691934 -0.186333333333333 -0.498666666666667 0.0648379223714054 0.0036508060628021 -2.31137051480078 -4.88158536207895 Q12802 AKAP13 Q12802.2.S2713.p_AKAP13 Q12802-2_S2713s _1_1_2713_2713 Q12802-2 Q12802-2|Q12802-4|A8MYJ1|A0A087WTD7 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.31413.31413.3 19.82 19.82 1.979 5 1 1 0 907.4667 2640.4325 S2713s TMT10 2701 (R) IPSFFPSPEEPPsPSAPSIAK (S) IPS(0.0)FFPS(0.0)PEEPPS(0.99)PS(0.0)APS(0.0)IAK K:TMT10,s:Phosphorylated S AKAP13 310921 2 26 66.1 683.25 HUMAN 1 -11.8817 -24.3761 PSPEPEGSPPAHPQ_-p Q7Z406-2;S2030-p PSPEPEGSPPAHPQ_ 0.558906099125035 0.507968860049765 0.0896666666666667 0.0636666666666667 4.66252538511861 3.94251957518791 0.0896666666666667 0.0636666666666667 0.341780642210463 0.403411284544911 1.04183452559628 0.905974284422512 Q7Z406 MYH14 Q7Z406.2.S2030.p_MYH14 Q7Z406-2_S2010sS2030s_2_2_2010_2030 Q7Z406-2 Q7Z406-2|Q7Z406-6|Q7Z406-4|A1L2Z2 Isoform 2 of Myosin-14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20449.20449.4 22.53 22.53 3.153 4 2 2 0 1058.4663 4070.9053 S2010s S2030s TMT10 2000 (R) QVFRLEEGVAsDEEAEEAQPGSGPSPEPEGsPPAHPQ (-) QVFRLEEGVAS(0.99)DEEAEEAQPGS(0.0)GPS(0.0)PEPEGS(0.99)PPAHPQ s:Phosphorylated S MYH14 233033.9 4 52 296.6 379.15 HUMAN 1 4.6625 3.9425 PSPEPPPSPLQVPTY-p Q9HCH0;S573-p PSPEPPPSPLQVPTY 0.876071171308073 0.488069413769716 -0.0226666666666667 -0.093 1.12693815941837 4.16244657331184 -0.0226666666666667 -0.0930000000000001 0.771447159088775 0.383491147068203 -0.30542328502218 -0.947891433920807 Q9HCH0 NCKAP5L Q9HCH0.S573.p_NCKAP5L Q9HCH0_S573s _1_1_573_573 Q9HCH0 Q9HCH0|Q9HCH0-3|Q9HCH0-2 Nck-associated protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.33678.33678.3 23.52 21.62 2.869 5 1 1 0 1214.9743 3562.9359 S573s TMT10 565 (R) GPSPEPPPsPLQVPTYPQLTLEVPQAPEVLR (S) GPS(0.0)PEPPPS(0.99)PLQVPT(0.0)Y(0.0)PQLT(0.0)LEVPQAPEVLR s:Phosphorylated S NCKAP5L 140323.1 5 9 609.1 261.98 HUMAN 1 -1.1269 -4.1624 PSPEQTLSPLSKMPH-p Q53SF7;S993-p PSPEQTLSPLSKMPH 0.0401770987425321 0.00224984164411745 -0.531666666666667 -1.01366666666667 31.2456500192846 41.0121338315696 -0.531666666666667 -1.01366666666667 0.000750645694715252 7.92112044164703e-05 -6.82025200842758 -10.5961087065278 Q53SF7 COBLL1 Q53SF7.S993.p_COBLL1 Q53SF7_S993s _1_1_993_993 Q53SF7 A0A0D9SG04|Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20998.20998.4 10.84 10.84 1.224 4 1 1 0 667.3427 2586.3849 S993s TMT10 979 (K) EAERDMLPSPEQTLsPLSK (M) EAERDMLPS(0.0)PEQT(0.0)LS(0.99)PLS(0.0)K K:TMT10,s:Phosphorylated S COBLL1 132526.1 1 20 163.1 494.83 HUMAN 1 -31.2457 -41.0121 PSPGWVASPKTAMPS-p Q86UU0;S1010-p PSPGWVASPKTAMPS 0.762939447418071 0.689736990388935 -0.0426666666666667 0.0383333333333334 2.25205933188355 2.21054762924516 -0.0426666666666667 0.0383333333333334 0.595379760189685 0.601097936482362 -0.563926089027548 0.55487345004739 Q86UU0 BCL9L Q86UU0.S1010.p_BCL9L Q86UU0_S1010s _1_1_1010_1010 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23204.23204.3 18.18 18.18 3.899 4 1 1 0 712.7036 2056.1302 S1010s TMT10 997 (K) SPSMAVPSPGWVAsPK (T) S(0.0)PS(0.0)MAVPS(0.0)PGWVAS(0.99)PK K:TMT10,s:Phosphorylated S BCL9L 157526.3 2 22 139.1 524.37 HUMAN 1 -2.2521 2.2105 PSPKPRLSPRETIFG-p S4R313;S370-p PSPKPRLSPRETIFG 0.127518924115859 0.70058514049814 -0.807666666666667 0.0673333333333334 18.5542468931653 2.12513611388588 -0.807666666666667 0.0673333333333334 0.0139500354319488 0.613036578436091 -3.57531566247609 0.536275666228087 S4R313 NotFound S4R313.S370.p_NotFound S4R313_S370s _1_1_370_370 S4R313 Q9NP74|S4R313|Q9NP74-2|Q9NP74-3 Palmdelphin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7901.7901.3 9.45 9.45 3.326 2 1 1 0 620.3481 1779.0641 S370s TMT10 361 (K) DAPSPKPRLsPR (E) DAPS(0.0)PKPRLS(0.99)PR K:TMT10,s:Phosphorylated S PALMD 62879.8 1 1 6795.1 9.45 HUMAN 1 -18.5542 2.1251 PSPKVIKTPVVKKTE-p Q9Y6X9;T717-p PSPKVIKTPVVKKTE 0.189644951957206 0.00477301299603966 -0.213666666666667 -0.641333333333333 14.1282984756147 33.9295205154339 -0.213666666666667 -0.641333333333333 0.0386518381610517 0.000404620561527021 -2.71650484395113 -7.70832587856885 Q9Y6X9 MORC2 Q9Y6X9.T717.p_MORC2 Q9Y6X9_T717t _1_1_717_717 Q9Y6X9 Q9Y6X9|Q9Y6X9-2 MORC family CW-type zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15477.15477.3 9.69 9.69 99 1 1 1 0 551.0225 1571.0863 T717t TMT10 714 (K) VIKtPVVK (K) VIKT(1.0)PVVK K:TMT10,t:Phosphorylated T MORC2 118619.8 1 5 309.1 372.4 HUMAN 1 -14.1283 -33.9295 PSPLEAGSDGCEEPK-p Q9BUA3;S61-p PSPLEAGSDGCEEPK 0.513829023087372 0.796041429659667 0.0913333333333333 -0.042 5.34254577823218 1.38306149007182 0.0913333333333334 -0.042 0.292243877973244 0.727266948492183 1.16647738287758 -0.367346802951829 Q9BUA3 C11orf84 Q9BUA3.S61.p_C11orf84 Q9BUA3_S61s _1_1_61_61 Q9BUA3 Q9BUA3 SPIN1-docking protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11863.11863.4 10.34 10.34 4.522 3 1 1 0 665.577 2579.3176 S61s TMT10 49 (K) TPPPRPSPLEAGsDGCEEPK (Q) T(0.0)PPPRPS(0.0)PLEAGS(0.99)DGCEEPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C11orf84 41321.3 1 3 884.1 206.69 HUMAN 1 5.3425 -1.3831 PSPLEDLSPCPASCG-p Q9BTC0;S947-p PSPLEDLSPCPASCG 0.857856311166697 0.397507286408576 0.0403333333333333 0.100333333333333 1.29788944061187 5.326183179972 0.0403333333333333 0.100333333333333 0.741670586547916 0.29334702085061 0.347017534325163 1.1632628014462 Q9BTC0 DIDO1 Q9BTC0.S947.p_DIDO1 Q9BTC0_S947s _1_1_947_947 Q9BTC0 Q9BTC0|Q9BTC0-1 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23321.23321.5 22.14 14.15 4.174 10 1 1 0 952.6479 4679.2344 S947s TMT10 927 (R) TYFPGPPGDGHPEPSPLEDLsPCPASCGSGVVTTVTVSGRDPR (T) T(0.0)Y(0.0)FPGPPGDGHPEPS(0.0)PLEDLS(0.99)PCPAS(0.0)CGS(0.0)GVVT(0.0)T(0.0)VT(0.0)VS(0.0)GRDPR C:Carbamidomethylation,s:Phosphorylated S DIDO1 245579.9 1 10 153.1 505.54 HUMAN 1 1.2979 5.3262 PSPLLLPSPGGWKAI-p Q8NC74;S151-p PSPLLLPSPGGWKAI 0.31273242382368 0.0278576052672457 0.556666666666667 -0.410333333333333 9.44602760769869 21.0729890923883 0.556666666666667 -0.410333333333333 0.113604945904657 0.00781090023431187 1.88560519821964 -4.1089925386002 Q8NC74 RBBP8NL Q8NC74.S151.p_RBBP8NL Q8NC74_S151s _1_1_151_151 Q8NC74 Q8NC74 RBBP8 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25816.25816.4 16.78 13.77 5.98 4 1 1 0 726.1494 2821.6067 S151s TMT10 136 (R) AKEGTSDPPSPLLLPsPGGWK (A) AKEGT(0.0)S(0.0)DPPS(0.0)PLLLPS(0.99)PGGWK K:TMT10,s:Phosphorylated S RBBP8NL 71886.7 1 3 565.1 270.89 HUMAN 1 9.446 -21.073 PSPLNPISPLKKPFS-p Q8NE35-2;S290-p PSPLNPISPLKKPFS 0.167891217287721 0.0892153780529947 -0.263666666666667 -0.192333333333333 15.4702201830213 13.8894277520863 -0.263666666666667 -0.192333333333333 0.0283777515239148 0.0408373192061629 -2.96711542144547 -2.67105262527245 Q8NE35 CPEB3 Q8NE35.2.S290.p_CPEB3 Q8NE35-2_S290s_1_1_290_290 Q8NE35-2 Q8NE35|Q8NE35-2 Isoform 2 of Cytoplasmic polyadenylation element-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33352.33352.3 15.18 15.18 1.191 2 1 1 0 884.8499 2571.5638 N287n S290s TMT10 271 (R) AVGVGVGVGVGVPSPLnPIsPLK (K) AVGVGVGVGVGVPS(0.0)PLN(1.0)PIS(0.99)PLK K:TMT10,n:Deamidated,s:Phosphorylated S CPEB3 75066.7 1 2 2497.1 81.21 HUMAN 1 -15.4702 -13.8894 PSPLPQKSPVRSLSK-p Q92730;S198-p PSPLPQKSPVRSLSK 0.345558022218504 0.412704355860616 -0.234 0.0906666666666667 8.57696620022147 5.11201587650154 -0.234 0.0906666666666667 0.138772489698351 0.30817571506126 -1.73513288152608 1.12431494873325 Q92730 RND1 Q92730.S198.p_RND1 Q92730_S198s _1_1_198_198 Q92730 Q92730 Rho-related GTP-binding protein Rho6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19744.19744.4 11.11 11.11 1.493 4 1 1 0 748.6679 2911.6829 S198s TMT10 182 (R) TASMLCLNKPSPLPQKsPVR (S) T(0.0)AS(0.0)MLCLNKPS(0.0)PLPQKS(0.99)PVR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RND1 26683.3 1 1 6538.1 11.11 HUMAN 1 -8.577 5.112 PSPLTIGTPESQRKP-p Q9NPI6;T531-p PSPLTIGTPESQRKP 0.898481077862575 0.217906969082404 -0.0226666666666667 -0.166 0.911215580062272 8.70846921725375 -0.0226666666666667 -0.166 0.810734103520488 0.134633482081207 -0.251457079126457 -1.75728858238147 Q9NPI6 DCP1A Q9NPI6.T531.p_DCP1A Q9NPI6_T531t _1_1_531_531 Q9NPI6 Q9NPI6|Q9NPI6-2 mRNA-decapping enzyme 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14720.14720.3 16.13 16.13 2.285 6 1 1 0 646.3248 1856.9915 T531t TMT10 521 (K) ASSPSPLTIGtPESQR (K) AS(0.0)S(0.0)PS(0.0)PLT(0.0)IGT(0.99)PES(0.0)QR t:Phosphorylated T DCP1A 63479.5 2 14 344.1 352.95 HUMAN 1 -0.9112 -8.7085 PSPNSSLTRSCASSY-p Q8TF40;T278-p PSPNSSLTRSCASSY 0.875972211552485 0.361070943097897 0.0496666666666667 0.26 1.12763398859852 5.87034355504583 0.0496666666666667 0.26 0.771323567271228 0.258800817885683 0.3055946068185 1.26113777274409 Q8TF40 FNIP1 Q8TF40.T278.p_FNIP1 Q8TF40_T278t _1_1_278_278 Q8TF40 Q8TF40|Q8TF40-3 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.33884.33884.3 14.16 11.68 1.181 9 1 1 0 828.7716 2404.3285 T278t TMT10 259 (R) SASLSSLLITPFPSPNSSLtR (S) S(0.0)AS(0.0)LS(0.0)S(0.0)LLIT(0.0)PFPS(0.0)PNS(0.0)S(0.0)LT(0.99)R t:Phosphorylated T FNIP1 132549.9 1 10 310.1 372.19 HUMAN 1 1.1276 5.8703 PSPPGAPSPPEPGGE-p Q06587;S254-p PSPPGAPSPPEPGGE 0.982842045127411 0.0224034900763493 -0.00400000000000001 0.392 0.148669948069226 22.5328330573663 -0.00400000000000001 0.392 0.96634678295916 0.00558106003566636 -0.044178248014611 4.44000740361884 Q06587 RING1 Q06587.S254.p_RING1 Q06587_S248sS254s_2_2_248_254 Q06587 Q06587|Q06587-2 E3 ubiquitin-protein ligase RING1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33793.33793.5 13.87 13.87 3.898 4 2 2 0 906.6784 4369.396 S248s S254s TMT10 236 (R) GGTLGGGTLGPPsPPGAPsPPEPGGEIELVFRPHPLLVEK (G) GGT(0.0)LGGGT(0.0)LGPPS(0.99)PPGAPS(0.99)PPEPGGEIELVFRPHPLLVEK K:TMT10,s:Phosphorylated S RING1 42999.1 6 10 1195.1 167.38 HUMAN 1 -0.1487 22.5328 PSPPGYMSDQEEDMC-p Q6PJT7;S533-p PSPPGYMSDQEEDMC 0.472226540382335 0.667413040251772 -0.112 -0.042 6.01020357406537 2.40349684190013 -0.112 -0.042 0.25059917827641 0.574976792469597 -1.28638107640308 -0.596339993193689 Q6PJT7 ZC3H14 Q6PJT7.S533.p_ZC3H14 Q6PJT7_S533s _1_1_533_533 Q6PJT7 Q6PJT7|Q6PJT7-2|Q6PJT7-9|Q6PJT7-5|G3V411 Zinc finger CCCH domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32404.32618.5 25.68 25.68 1.22 6 1 1 0 992.274 4877.3749 S533s TMT10 518 (K) FIVTLDGVPSPPGYMsDQEEDMCFEGMKPVNQTAASNK (G) FIVT(0.0)LDGVPS(0.0)PPGY(0.0)MS(0.99)DQEEDMCFEGMKPVNQT(0.0)AAS(0.0)NK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZC3H14 83844.1 20 16 420.1 320.31 HUMAN 1 -6.0102 -2.4035 PSPPPADSPSEGFSL-p Q6ZSZ5;S1130-p PSPPPADSPSEGFSL 0.914747875093277 0.103581334721923 -0.0206666666666667 -0.252666666666667 0.758557880798633 13.0077162826441 -0.0206666666666667 -0.252666666666667 0.839738784071362 0.0500297544959275 -0.212168185148918 -2.51107873926365 Q6ZSZ5 ARHGEF18 Q6ZSZ5.S1130.p_ARHGEF18 Q6ZSZ5_S1124sS1130s_2_2_1124_1130 Q6ZSZ5 Q6ZSZ5 Rho guanine nucleotide exchange factor 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24477.24477.4 16.16 16.16 1.131 5 2 2 0 875.4108 3338.7098 S1124s S1130s TMT10 1110 (R) HSPAPPPDPGFPAPsPPPADsPSEGFSLK (A) HS(0.0)PAPPPDPGFPAPS(0.99)PPPADS(0.99)PS(0.0)EGFS(0.0)LK K:TMT10,s:Phosphorylated S ARHGEF18 131234.5 1 12 799.1 223.19 HUMAN 1 -0.7586 -13.0077 PSPPPPLSPPPTTSP-p Q9NQX3-2;S194-p PSPPPPLSPPPTTSP 0.79813572883131 0.0241846702089274 -0.0446666666666667 0.304666666666667 1.88868170687583 22.0263777659563 -0.0446666666666667 0.304666666666667 0.647339084548312 0.00627136710107898 -0.484006204400056 4.32338492130479 Q9NQX3 GPHN Q9NQX3.2.S194.p_GPHN Q9NQX3-2_S188sS194s_2_2_188_194 Q9NQX3-2 F5H039|Q9NQX3-2|G3V582 Isoform 2 of Gephyrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19363.19363.5 17.78 17.78 6.697 6 2 2 0 853.2266 4102.1588 S188s S194s TMT10 178 (K) EVHDELEDLPsPPPPLsPPPTTSPHKQTEDK (G) EVHDELEDLPS(0.99)PPPPLS(0.99)PPPT(0.0)T(0.0)S(0.0)PHKQT(0.0)EDK K:TMT10,s:Phosphorylated S GPHN 84130.7 7 7 1469.1 139.8 HUMAN 1 -1.8887 22.0264 PSPPPPPSPPASPSL-p O75864;S597-p PSPPPPPSPPASPSL 0.665544717655066 0.633525431807996 0.0586666666666667 -0.0453333333333333 3.30652083118053 2.6951182136693 0.0586666666666667 -0.0453333333333333 0.4670333747676 0.537635798636175 0.782011249214044 -0.657689541245339 O75864 PPP1R37 O75864.S597.p_PPP1R37 O75864_S591sS597s_2_2_591_597 O75864 O75864|O75864-2 Protein phosphatase 1 regulatory subunit 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22280.22280.5 15.53 15.47 1.153 8 2 2 0 867.6267 4174.1658 S591s S597s TMT10 574 (R) VESPPERAEPPASPTPPsPPPPPsPPASPSLPPAGAIDTR (D) VES(0.0)PPERAEPPAS(0.0)PT(0.0)PPS(0.99)PPPPPS(0.99)PPAS(0.0)PS(0.0)LPPAGAIDT(0.0)R s:Phosphorylated S PPP1R37 75450.7 2 7 1340.1 151.86 HUMAN 1 3.3065 -2.6951 PSPRGCFTLPRSEPI-p Q92997;T346-p PSPRGCFTLPRSEPI 0.683662320595614 0.260818153084703 -0.0546666666666667 0.125666666666667 3.09562181885917 7.69162627366647 -0.0546666666666667 0.125666666666667 0.490272820953097 0.170152123174323 -0.739768140511932 1.58113490361619 Q92997 DVL3 Q92997.T346.p_DVL3 Q92997_T346t _1_1_346_346 Q92997 Q92997|Q92997-2 Segment polarity protein dishevelled homolog DVL-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17079.17079.2 9.36 6.88 99 1 1 1 0 580.2811 1079.5869 T346t TMT10 343 (R) GCFtLPR (S) GCFT(1.0)LPR C:Carbamidomethylation,t:Phosphorylated T DVL3 78395.8 1 6 2133.1 96.37 HUMAN 1 -3.0956 7.6916 PSPRLAESPQLSKGS-p Q96A19;S12-p PSPRLAESPQLSKGS 0.69620991687125 0.125149245682101 -0.0616666666666667 -0.199333333333333 2.95508281907084 11.9023615473093 -0.0616666666666667 -0.199333333333333 0.506397692531185 0.0645303239419548 -0.711274254232182 -2.31388465957096 Q96A19 CCDC102A Q96A19.S12.p_CCDC102A Q96A19_S12s _1_1_12_12 Q96A19 Q96A19 Coiled-coil domain-containing protein 102A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14774.14774.2 10.57 6.87 2.805 2 1 1 0 755.9169 1430.8619 S12s TMT10 9 (R) LAEsPQLSK (G) LAES(0.99)PQLS(0.0)K K:TMT10,s:Phosphorylated S CCDC102A 62823.1 2 1 4345.1 33.11 HUMAN 1 -2.9551 -11.9024 PSPRRKRTPSPSYQR-p Q5T200;T354-p PSPRRKRTPSPSYQR 0.932495418439431 0.805074553506459 0.013 0.0323333333333333 0.598916268005263 1.31836060375031 0.013 0.0323333333333333 0.871180956035184 0.738182830441033 0.170005765668831 0.351897461657067 Q5T200 ZC3H13 Q5T200.T354.p_ZC3H13 Q5T200_T354tS356s_2_2_354_356 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3223.3223.2 9.8 9.8 9.8 4 2 2 0 548.1992 935.4581 T354t S356s Hydrogen 354 (R) tPsPSYQR (T) T(0.99)PS(0.99)PS(0.0)Y(0.0)QR t:Phosphorylated T,s:Phosphorylated S ZC3H13 197316.7 4 37 24.1 987.82 HUMAN 1 0.5989 1.3184 PSPRRSNSPDKFKRP-p Q16204;S419-p PSPRRSNSPDKFKRP 0.46084376761032 0.907119940995938 0.119333333333333 -0.0173333333333333 6.20451709642582 0.593004771341542 0.119333333333333 -0.0173333333333333 0.239633919025411 0.872367590940367 1.32091596152602 -0.168406219535875 Q16204 CCDC6 Q16204.S419.p_CCDC6 Q16204_S419s _1_1_419_419 Q16204 Q16204 Coiled-coil domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9932.9932.3 10.45 10.45 2.106 2 1 1 0 563.9781 1609.9517 S419s TMT10 417 (R) SNsPDKFK (R) S(0.0)NS(0.99)PDKFK K:TMT10,s:Phosphorylated S CCDC6 53461.2 5 13 423.1 319.68 HUMAN 1 6.2045 -0.593 PSPRVDVSCEPLEGV-p Q12888-2;S776-p PSPRVDVSCEPLEGV 0.324688077306893 0.0216682162471455 -0.206666666666667 -0.819 9.15177585065608 22.7546135685105 -0.206666666666667 -0.819 0.121568879810562 0.00530320778015993 -1.83463928693609 -4.49169534290575 Q12888 TP53BP1 Q12888.2.S776.p_TP53BP1 Q12888-2_S776s _1_1_776_776 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20941.20941.3 12.85 12.85 99 1 1 1 0 667.0021 1919.0196 S776s TMT10 773 (R) VDVsCEPLEGVEK (C) VDVS(1.0)CEPLEGVEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TP53BP1 216167.2 2 33 3.1 2297.07 HUMAN 1 -9.1518 -22.7546 PSPSGLMSPSRLPGS-p Q9P1Y5;S1080-p PSPSGLMSPSRLPGS 0.133129641422699 0.812297645225488 -0.262666666666667 0.0433333333333334 18.0464402277252 1.2656927947226 -0.262666666666667 0.0433333333333333 0.0156803581205983 0.747189431620915 -3.47166998557584 0.339223347296565 Q9P1Y5 CAMSAP3 Q9P1Y5.S1080.p_CAMSAP3 Q9P1Y5_S1080s _1_1_1080_1080 Q9P1Y5 Q9P1Y5-2 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16409.16409.3 9.67 7.44 1.285 5 1 1 0 669.3409 1926.0428 S1080s TMT10 1072 (R) APSPSGLMsPSRLPGSR (E) APS(0.0)PS(0.0)GLMS(0.99)PS(0.0)RLPGS(0.0)R s:Phosphorylated S CAMSAP3 135546 1 24 217.1 432.4 HUMAN 1 -18.0464 1.2657 PSPSPGRSPQRLKET-p Q8WYP5-2;S1257-p PSPSPGRSPQRLKET 0.105885561453204 0.180897348270083 -0.406333333333333 -0.314333333333333 20.5349998565975 9.7661744107812 -0.406333333333333 -0.314333333333333 0.00884097198393071 0.105531608808108 -3.9947194831006 -1.94035002712343 Q8WYP5 AHCTF1 Q8WYP5.2.S1257.p_AHCTF1 Q8WYP5-2_S1257s _1_1_1257_1257 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10322.10322.5 14.51 14.51 2.234 6 1 1 0 501.0791 2421.3978 S1257s TMT10 1244 (R) STPLASPSPSPGRsPQRLK (E) S(0.0)T(0.0)PLAS(0.0)PS(0.0)PS(0.0)PGRS(0.99)PQRLK K:TMT10,s:Phosphorylated S AHCTF1 258049.6 2 14 40.1 829.79 HUMAN 1 -20.535 -9.7662 PSPSPVPSPAPGRKG-p O43281;S323-p PSPSPVPSPAPGRKG 0.744318917690434 0.113093627828308 0.052 -0.208 2.43411274962334 12.4851460158563 0.052 -0.208 0.570937705089275 0.0564267969550785 0.602929030503197 -2.417429522601 O43281 EFS O43281.S323.p_EFS O43281_S319sS323s_2_2_319_323 O43281 O43281|O43281-2|O43281-3 Embryonal Fyn-associated substrate HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22506.22506.5 16.7 16.7 2.208 3 2 2 0 627.3424 2972.745 S319s S323s TMT10 305 (R) RPLPALPVPEAPSPsPVPsPAPGRK (G) RPLPALPVPEAPS(0.0)PS(0.99)PVPS(0.99)PAPGRK K:TMT10,s:Phosphorylated S EFS 59270.7 4 4 2954.1 64.79 HUMAN 1 2.4341 -12.4851 PSPTSQRSRGRASSH-p P02545;S398-p PSPTSQRSRGRASSH 0.206108312152609 0.466681505376195 -0.19 -0.0726666666666667 13.2641068882554 4.41322370835076 -0.19 -0.0726666666666667 0.0471616847755991 0.361974210180467 -2.55876827998457 -0.995156873869223 P02545 LMNA P02545.S398.p_LMNA P02545_S398s _1_1_398_398 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5906.5906.2 8.93 6.21 6.208 5 1 1 0 762.89 1444.807 S398s TMT10 389 (R) LSPSPTSQRsR (G) LS(0.0)PS(0.0)PT(0.0)S(0.0)QRS(0.99)R s:Phosphorylated S LMNA 74423.5 3 19 60.1 706.83 HUMAN 1 -13.2641 -4.4132 PSPVPKPSPKITRKT-p A8K855;S212-p PSPVPKPSPKITRKT 0.911605742223265 0.421831994835209 0.0191666666666667 -0.0765 0.784273873620278 4.98950582636783 0.0191666666666667 -0.0765 0.834781109321532 0.316992814130399 0.218854575622278 -1.10191232044037 A8K855 EFCAB7 A8K855.S212.p_EFCAB7 A8K855_S206sS212s_2_2_206_212 A8K855 A8K855|A8K855-2 EF-hand calcium-binding domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10004.10004.4 10.72 10.72 1.394 3 2 2 0 871.9398 3324.8056 S206s S212s TMT10 191 (R) HQFGNHIEGSPERDPsPVPKPsPK (I) HQFGNHIEGS(0.0)PERDPS(0.99)PVPKPS(0.99)PK K:TMT10,s:Phosphorylated S EFCAB7 73064 2 3 3826.1 42.29 HUMAN 2 0.7843 -4.9895 PSPVPPLSPIHSNQQ-p P51825-2;S219-p PSPVPPLSPIHSNQQ 0.490692853704506 0.295730581110737 0.102 0.125 5.69396150223264 6.98558692781637 0.102 0.125 0.269527975853993 0.200189505695087 1.22984749535785 1.45808804000107 P51825 AFF1 P51825.2.S219.p_AFF1 P51825-2_S219s _1_1_219_219 P51825-2 P51825-2|P51825-3|F5GXF9 Isoform 2 of AF4/FMR2 family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.31757.31757.4 17.38 17.38 1.95 6 1 1 0 807.4433 3146.7775 S219s TMT10 204 (R) ELSPLISLPSPVPPLsPIHSNQQTLPR (T) ELS(0.0)PLIS(0.0)LPS(0.0)PVPPLS(0.99)PIHS(0.0)NQQT(0.0)LPR s:Phosphorylated S AFF1 133180 3 1 1199.1 167.15 HUMAN 1 5.694 6.9856 PSPVQSQSPSTNWSP-p A9Z1X7;S784-p PSPVQSQSPSTNWSP 0.392306727378366 0.0427533614755934 -0.187 0.498666666666667 7.49508439142706 18.3431282899264 -0.187 0.498666666666667 0.178029331413531 0.0146449256442469 -1.54742662041439 3.52908489350365 A9Z1X7 NotFound A9Z1X7.S784.p_NotFound A9Z1X7_S784s _1_1_784_784 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19132.19132.4 24.02 24.02 1.461 6 1 1 0 927.7741 3628.1033 S784s TMT10 772 (K) KPPAPPSPVQSQsPSTNWSPAVPVKK (A) KPPAPPS(0.0)PVQS(0.0)QS(0.99)PS(0.0)T(0.0)NWS(0.0)PAVPVKK K:TMT10,s:Phosphorylated S SRRM1 103445.7 7 47 8.1 1346.57 HUMAN 1 -7.4951 18.3431 PSQEDGKSPTTTLRV-p O43829;S190-p PSQEDGKSPTTTLRV 0.276322361958096 0.0148233079205259 0.189333333333333 0.419 10.5616374404427 25.32127951633 0.189333333333333 0.419 0.0878691157402803 0.00293678429050548 2.07947780133655 5.11911334632269 O43829 ZBTB14 O43829.S190.p_ZBTB14 O43829_S190s_1_1_190_190 O43829 O43829 Zinc finger and BTB domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17835.17835.4 8.23 8.23 1.782 10 1 1 0 1435.4072 5657.6375 N149n S190s TMT10 148 (K) InRPIGDAADTQDDDVEEIGDQDDSPSDDTVEGTPPSQEDGKsPTTTLR (V) IN(1.0)RPIGDAADT(0.0)QDDDVEEIGDQDDS(0.0)PS(0.0)DDT(0.0)VEGT(0.0)PPS(0.0)QEDGKS(0.99)PT(0.0)T(0.0)T(0.0)LR K:TMT10,n:Deamidated,s:Phosphorylated S ZBTB14 51925.3 2 2 1836.1 111.99 HUMAN 1 10.5616 25.3213 PSQEYVASEGEEDPE-p Q86X95;S202-p PSQEYVASEGEEDPE 0.545093397509618 0.133542636081177 0.08 0.159333333333333 4.8639887167104 11.5268499297578 0.08 0.159333333333333 0.326288019862223 0.0703582464655207 1.07907337522353 2.24761108722936 Q86X95 CIR1 Q86X95.S202.p_CIR1 Q86X95_S202s _1_1_202_202 Q86X95 Q86X95 Corepressor interacting with RBPJ 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26856.26856.3 26.35 26.35 3.461 4 1 1 0 1150.21 3368.6422 S202s TMT10 189 (R) NLTANDPSQEYVAsEGEEDPEVEFLK (S) NLT(0.0)ANDPS(0.0)QEY(0.0)VAS(0.99)EGEEDPEVEFLK K:TMT10,s:Phosphorylated S CIR1 52597.6 7 1 2295.1 89.34 HUMAN 1 4.864 11.5268 PSQNVWFSTVNGERP-p Q8TDW7;S2741-p PSQNVWFSTVNGERP 0.910912795817508 0.113248129466218 0.0173333333333333 0.178333333333333 0.794632884792839 12.474872242223 0.0173333333333333 0.178333333333333 0.832792320110955 0.056560439540725 0.221540058779107 2.41559629848386 Q8TDW7 FAT3 Q8TDW7.S2741.p_FAT3 Q8TDW7_S2735sS2741sT2742t_3_3_2735_2742 Q8TDW7 Q8TDW7|Q8TDW7-3|E9PQ73 Protocadherin Fat 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.38089.38089.4 7.53 5.19 1.165 5 3 3 0 1208.3486 4589.4971 S2735s S2741s T2742t N2744n TMT10 2732 (R) ILPsQNVWFstVnGERPENNKGGIFVIEQETGTIK (L) ILPS(0.99)QN(0.0)VWFS(0.99)T(0.99)VN(0.99)GERPEN(0.0)N(0.0)KGGIFVIEQET(0.0)GT(0.0)IK K:TMT10,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated FAT3 508994.1 2 4 4589.1 29.16 HUMAN 1 0.7946 12.4749 PSRASTASPCNNNIN-p Q71RC2-4;S603-p PSRASTASPCNNNIN 0.888253830343075 0.461430269505558 0.0243333333333333 -0.097 1.00218549359199 4.47960245062215 0.0243333333333333 -0.097 0.793928606681477 0.356483764145329 0.274426545674826 -1.007579662007 Q71RC2 LARP4 Q71RC2.4.S603.p_LARP4 Q71RC2-4_S603s _1_1_603_603 Q71RC2-4 Q71RC2-4|Q71RC2-3|Q71RC2-5|Q71RC2-6 Isoform 4 of La-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17917.17917.2 23.92 23.92 2.779 4 1 1 0 1340.1428 2599.3096 S603s TMT10 599 (R) ASTAsPCNNNINAATAVALQEPR (K) AS(0.0)T(0.0)AS(0.99)PCNNNINAAT(0.0)AVALQEPR C:Carbamidomethylation,s:Phosphorylated S LARP4 81926.9 20 6 841.1 214.37 HUMAN 1 1.0022 -4.4796 PSRDGKFSPIQEKSP-p O43683;S655-p PSRDGKFSPIQEKSP 0.965995132801518 0.00125830331360344 0.007 -0.965666666666667 0.289999309463568 47.469242510877 0.00699999999999999 -0.965666666666667 0.935405822878833 1.79091819573172e-05 0.0848838867578225 -14.0610375951243 O43683 BUB1 O43683.S655.p_BUB1 O43683_S655s _1_1_655_655 O43683 O43683|O43683-3 Mitotic checkpoint serine/threonine-protein kinase BUB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18577.18577.4 19.94 15.82 2.969 5 1 1 0 1031.2501 4042.0287 S655s TMT10 632 (K) QCTQATLDSCEENMVVPSRDGKFsPIQEK (S) Q(0.0)CT(0.0)QAT(0.0)LDS(0.0)CEEN(0.0)M(0.0)VVPS(0.0)RDGKFS(0.99)PIQEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BUB1 123514.1 6 6 1341.1 151.76 HUMAN 1 0.29 -47.4692 PSRERSSSASSPEMK-p Q9UQ35;S1421-p PSRERSSSASSPEMK 0.00861592953244037 0.00232985334139993 -1.357 -0.852666666666667 53.0408898047734 40.4968725239849 -1.357 -0.852666666666667 4.96490587494869e-06 8.91892984008067e-05 -17.9538100508245 -10.3571250931999 Q9UQ35 SRRM2 Q9UQ35.S1421.p_SRRM2 Q9UQ35_S1421s _1_1_1421_1421 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7567.7567.2 13.34 7.76 1.372 5 1 1 0 774.8724 1468.7718 S1421s TMT10 1419 (R) SSsASSPEMK (D) S(0.0)S(0.0)S(0.99)AS(0.0)S(0.0)PEMK K:TMT10,s:Phosphorylated S SRRM2 300351.7 5 84 2.1 3310.34 HUMAN 1 -53.0409 -40.4969 PSRGAKASPVAVGSS-p Q5TGY3;S896-p PSRGAKASPVAVGSS 0.377007280567508 0.0610999358357444 0.157666666666667 -0.242 7.82903060600049 16.1668645546908 0.157666666666667 -0.242 0.164853032092061 0.0241720533736318 1.60548732788642 -3.09807848177727 Q5TGY3 AHDC1 Q5TGY3.S896.p_AHDC1 Q5TGY3_S896s _1_1_896_896 Q5TGY3 Q5TGY3 AT-hook DNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21528.21528.3 16.75 16.75 5.418 5 1 1 0 846.4266 2457.2935 S896s TMT10 895 (K) AsPVAVGSSGAGADPSFQPVLSAR (Q) AS(0.99)PVAVGS(0.0)S(0.0)GAGADPS(0.0)FQPVLS(0.0)AR s:Phosphorylated S AHDC1 170057.9 1 9 334.1 355.89 HUMAN 1 7.829 -16.1669 PSRGPALTPIRDEEW-p Q86X29-6;T297-p PSRGPALTPIRDEEW 0.538878785012306 0.219497721121265 -0.0876666666666667 -0.170666666666667 4.96038246100038 8.66936305001259 -0.0876666666666667 -0.170666666666667 0.319125680501481 0.135851267573159 -1.09679294334851 -1.75052424147744 Q86X29 LSR Q86X29.6.T297.p_LSR Q86X29-6_T297t _1_1_297_297 Q86X29-6 Q86X29|Q86X29-4|Q86X29-3|S4R3V8|Q86X29-2|Q86X29-5|Q86X29-6 Isoform 6 of Lipolysis-stimulated lipoprotein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13949.13949.4 20.1 20.1 11.403 2 1 1 0 571.7834 2204.141 T297t TMT10 293 (R) GPALtPIRDEEWGGHSPR (S) GPALT(0.99)PIRDEEWGGHS(0.0)PR t:Phosphorylated T LSR 54725.6 5 7 206.1 448.79 HUMAN 1 -4.9604 -8.6694 PSRKDPKYREWHHFL-p P30086;Y81-p PSRKDPKYREWHHFL 0.411382195733206 0.0275680180477793 -0.244 0.345333333333333 7.11739923228479 21.1503388856387 -0.244 0.345333333333333 0.194204852304977 0.00767301613481826 -1.48154808720704 4.1261431187802 P30086 PEBP1 P30086.Y81.p_PEBP1 P30086_Y81y_1_1_81_81 P30086 P30086 Phosphatidylethanolamine-binding protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.17389.17389.4 10.23 10.23 99 1 1 1 0 579.0496 2217.2156 Y81y M92m TMT10 81 (K) yREWHHFLVVNmK (G) Y(1.0)REWHHFLVVNM(1.0)K K:TMT10,y:Phosphorylated Y,m:Oxidized methionine PEBP1 21170.5 2 1 337.1 10.23 HUMAN 1 -7.1174 21.1503 PSRKGPASPTRPAAP-p A0A0D9SFE4;S847-p PSRKGPASPTRPAAP 0.348816513983719 0.0962029081832511 0.144333333333333 0.180333333333333 8.49981484097983 13.4446905311226 0.144333333333333 0.180333333333333 0.14125977686537 0.0452408698851695 1.72177453889436 2.59003549435342 A0A0D9SFE4 DNM1 A0A0D9SFE4.S847.p_DNM1 A0A0D9SFE4_S847s _1_1_847_847 A0A0D9SFE4 A0A0D9SFE4 Dynamin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20243.20243.4 10.87 10.87 1.846 2 1 1 0 691.6395 2683.5659 S847s TMT10 843 (R) KGPAsPTRPAAPRPAEAPLLDL (-) KGPAS(0.99)PT(0.0)RPAAPRPAEAPLLDL K:TMT10,s:Phosphorylated S DNM1 97635.9 1 1 6571.1 10.87 HUMAN 1 8.4998 13.4447 PSRKRKLSPGPTTLK-p Q5T6C5;S575-p PSRKRKLSPGPTTLK 0.222950316188728 0.293681889780543 -0.418 0.173 12.5356285080556 7.0235274063711 -0.418 0.173 0.0557746879546701 0.198448243554316 -2.42771659869784 1.46472490130592 Q5T6C5 ATXN7L2 Q5T6C5.S575.p_ATXN7L2 Q5T6C5_S575s _1_1_575_575 Q5T6C5 Q5T6C5 Ataxin-7-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10685.10685.3 11.87 9.3 4.471 3 1 1 0 655.7339 1885.2202 S575s TMT10 572 (K) RKLsPGPTTLK (R) RKLS(0.99)PGPT(0.0)T(0.0)LK K:TMT10,s:Phosphorylated S ATXN7L2 78834.1 5 4 2673.1 74.31 HUMAN 1 -12.5356 7.0235 PSRKRQASESSSRPH-p Q9BZX2;S254-p PSRKRQASESSSRPH 0.0417571234602878 0.000993050805672115 -1.202 -2.869 30.7701230347877 52.4215306271303 -1.202 -2.869 0.00083750555542022 5.72594190368175e-06 -6.66990048189803 -17.422508505506 Q9BZX2 UCK2 Q9BZX2.S254.p_UCK2 Q9BZX2_S254s _1_1_254_254 Q9BZX2 Q9BZX2|Q9BZX2-2 Uridine-cytidine kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3535.3535.3 13.93 11.7 3.099 4 1 1 0 465.5471 1314.66 S254s TMT10 252 (R) QAsESSSRPH (-) QAS(0.99)ES(0.0)S(0.0)S(0.0)RPH s:Phosphorylated S UCK2 29469.8 2 2 3690.1 45.33 HUMAN 1 -30.7701 -52.4215 PSRKRRFSSSDFSDL-p P23497-4;S451-p PSRKRRFSSSDFSDL 0.125436419556568 0.148897720069053 0.309666666666667 0.148333333333333 18.7548559621183 10.8892189673035 0.309666666666667 0.148333333333333 0.0133203121965862 0.0814850813145799 3.61667755465961 2.13576080119033 P23497 SP100 P23497.4.S451.p_SP100 P23497-4_S451s _1_1_451_451 P23497-4 P23497-4|P23497-3|P23497-2|E9PHV6|P23497-6|P23497-7 Isoform Sp100-C of Nuclear autoantigen Sp-100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17725.17725.4 19.71 16.15 1.121 9 1 1 0 826.6242 3223.5123 S451s TMT10 449 (R) RFsSSDFSDLSNGEELQETCSSSLRR (G) RFS(0.99)S(0.0)S(0.0)DFS(0.0)DLS(0.0)NGEELQET(0.0)CS(0.0)S(0.0)S(0.0)LRR C:Carbamidomethylation,s:Phosphorylated S SP100 103285 8 10 542.1 276.37 HUMAN 1 18.7549 10.8892 PSRMGSKSPGNTSQP-p Q9Y618;S2269-p PSRMGSKSPGNTSQP 0.331647864397022 0.482706710374473 -0.136333333333333 -0.097 8.95196525710958 4.22202041169212 -0.136333333333333 -0.097 0.127292692937243 0.37826656774528 -1.80004768338038 -0.959168999217358 Q9Y618 NCOR2 Q9Y618.S2269.p_NCOR2 Q9Y618_S2269s _1_1_2269_2269 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20861.20861.3 17.66 17.66 2.406 4 1 1 0 668.3399 1923.0376 S2269s TMT10 2269 (K) sPGNTSQPPAFFSK (L) S(0.99)PGNT(0.0)S(0.0)QPPAFFS(0.0)K K:TMT10,s:Phosphorylated S NCOR2 275540.8 20 36 16.1 1053.89 HUMAN 1 -8.952 -4.222 PSRNLAPTPRRRKAS-p Q8IU81;T377-p PSRNLAPTPRRRKAS 0.146091076236947 0.0154079660923365 0.367 -0.356 17.0148568270775 25.0680114912377 0.367 -0.356 0.019884483620633 0.00311314142820316 3.26556155587802 -5.05469137087984 Q8IU81 IRF2BP1 Q8IU81.T377.p_IRF2BP1 Q8IU81_T377t _1_1_377_377 Q8IU81 Q8IU81 Interferon regulatory factor 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7552.7552.2 9.08 3.05 99 1 1 1 0 539.2864 997.5992 T377t TMT10 373 (R) NLAPtPR (R) NLAPT(1.0)PR t:Phosphorylated T IRF2BP1 62599.7 2 5 274.1 392.67 HUMAN 1 17.0149 -25.068 PSRPGYPSPRSSEGF-p E7ESA6;S766-p PSRPGYPSPRSSEGF 0.996624147679768 0.281132378689907 -0.000666666666666672 0.135333333333333 0.0254423045319586 7.26241571550434 -0.000666666666666659 0.135333333333333 0.99415881930619 0.187827175807889 -0.00766514278597118 1.50644206157935 E7ESA6 NotFound E7ESA6.S766.p_NotFound E7ESA6_S766s _1_1_766_766 E7ESA6 E7ESA6|Q05397-5 Focal adhesion kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4894.4894.3 9.76 7.15 6.619 3 1 1 0 474.9081 1342.7429 S766s TMT10 759 (K) PSRPGYPsPR (S) PS(0.0)RPGY(0.0)PS(0.99)PR s:Phosphorylated S PTK2 124992.4 5 7 979.1 192.68 HUMAN 1 -0.0254 7.2624 PSRRARGSPFVRSGT-p Q9ULE0;S896-p PSRRARGSPFVRSGT 0.369805323847201 0.00988509881961476 0.218 -0.445666666666667 8.01404459727842 28.2002489434672 0.218 -0.445666666666667 0.157977610383776 0.00151347449154616 1.6375968947239 -5.89408017108105 Q9ULE0 WWC3 Q9ULE0.S896.p_WWC3 Q9ULE0_S896s _1_1_896_896 Q9ULE0 Q9ULE0 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6173.6173.3 9.11 3.61 99 1 1 1 0 400.2144 1118.6632 S896s TMT10 893 (R) ARGsPFVR (S) ARGS(1.0)PFVR s:Phosphorylated S WWC3 123814.7 2 22 161.1 495.35 HUMAN 1 8.014 -28.2002 PSRRMGRSRSPATAK-p Q9UQ35;S484-p PSRRMGRSRSPATAK 0.774092565349424 0.239981607404973 0.051 0.129666666666667 2.12855012468929 8.16661824104389 0.051 0.129666666666667 0.61255485665987 0.152523996349775 0.537085866564245 1.66351378391027 Q9UQ35 SRRM2 Q9UQ35.S484.p_SRRM2 Q9UQ35_S484sS486s_2_2_484_486 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3207.3207.2 10.85 5.47 3.723 3 2 2 0 603.7783 1046.6156 S484s S486s Hydrogen 484 (R) sRsPATAK (R) S(0.99)RS(0.99)PAT(0.0)AK K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 42 178 2.1 3310.34 HUMAN 1 2.1286 8.1666 PSRRRMYSFDDVLEE-p Q8WWI1-3;S471-p PSRRRMYSFDDVLEE 0.444478993442275 0.0693603073658644 -0.172 -0.22 6.48927790900463 15.4092953008278 -0.172 -0.22 0.224425503965401 0.0287786534786162 -1.37128318729826 -2.95358097155876 Q8WWI1 LMO7 Q8WWI1.3.S471.p_LMO7 Q8WWI1-3_S471s _1_1_471_471 Q8WWI1-3 Q8WWI1|Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23178.23178.5 18.33 18.33 4.193 8 1 1 0 901.8452 4425.2197 S471s TMT10 469 (R) MYsFDDVLEEGKRPPTMTVSEASYQSERVEEK (G) MY(0.0)S(0.99)FDDVLEEGKRPPT(0.0)MT(0.0)VS(0.0)EAS(0.0)Y(0.0)QS(0.0)ERVEEK K:TMT10,s:Phosphorylated S LMO7 154694.3 6 10 61.1 704.74 HUMAN 1 -6.4893 -15.4093 PSRRSPGTPRPPGAS-p Q9Y3X0;T83-p PSRRSPGTPRPPGAS 0.253948379021471 0.59275810344016 0.232666666666667 -0.0506666666666666 11.3405966570668 3.07284450713789 0.232666666666667 -0.0506666666666666 0.0734412963631502 0.4928508946952 2.21589014306789 -0.735064781391849 Q9Y3X0 CCDC9 Q9Y3X0.T83.p_CCDC9 Q9Y3X0_T83t _1_1_83_83 Q9Y3X0 Q9Y3X0 Coiled-coil domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.4936.4936.4 8.54 8.54 1.788 3 1 1 0 462.257 1766.0437 T83t TMT10 79 (R) RSPGtPRPPGASK (G) RS(0.0)PGT(0.99)PRPPGAS(0.0)K K:TMT10,t:Phosphorylated T CCDC9 59816.1 1 2 2003.1 103.17 HUMAN 1 11.3406 -3.0728 PSRSATASPQQPQAQ-p Q9BX66-12;S1213-p PSRSATASPQQPQAQ 0.527344543785721 0.168098499761749 0.148333333333333 0.240666666666667 5.1427614678296 10.1876841179762 0.148333333333333 0.240666666666667 0.306001709860835 0.0957704632626552 1.13015668230559 2.01350576507428 Q9BX66 SORBS1 Q9BX66.12.S1213.p_SORBS1 Q9BX66-12_S1213s _1_1_1213_1213 Q9BX66-12 Q9BX66-12|Q9BX66-5|Q9BX66-6|Q9BX66-10|Q9BX66-8|Q9BX66-9 Isoform 12 of Sorbin and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4464.4464.2 9.46 4.92 2.28 3 1 1 0 903.9385 1726.9034 S1213s TMT10 1209 (R) SATAsPQQPQAQQR (R) S(0.0)AT(0.0)AS(0.99)PQQPQAQQR s:Phosphorylated S SORBS1 144537.7 2 6 2166.1 94.72 HUMAN 1 5.1428 10.1877 PSRSPSHSPNRSPCV-p Q15735;S355-p PSRSPSHSPNRSPCV 0.420944975696746 0.0465040864267335 0.334666666666667 0.250666666666667 6.93045412280937 17.8260113929853 0.334666666666667 0.250666666666667 0.202747070466265 0.016496767768175 1.44883400031865 3.42436924456466 Q15735 INPP5J Q15735.S355.p_INPP5J Q15735_S355s _1_1_355_355 Q15735 Q15735|B4DF95 Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.2856.2856.3 8.61 8.61 3.093 3 1 1 0 397.5215 1110.5853 S355s TMT10 351 (R) SPSHsPNR (S) S(0.0)PS(0.0)HS(0.99)PNR s:Phosphorylated S INPP5J 107651.3 1 3 1357.1 150.44 HUMAN 1 6.9305 17.826 PSRSSSLSLSKMDFD-p Q9HC77;S787-p PSRSSSLSLSKMDFD 0.0482466396076474 0.0131391790141234 -0.589 -0.834666666666667 29.1628590670558 26.2049509449045 -0.589 -0.834666666666667 0.00121259030971284 0.00239609981438632 -6.18141018112624 -5.34847233123344 Q9HC77 CENPJ Q9HC77.S787.p_CENPJ Q9HC77_S787s _1_1_787_787 Q9HC77 Q9HC77|F6VUX8|Q9HC77-2 Centromere protein J HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13509.13509.2 10.69 2.2 1.125 5 1 1 0 673.869 1266.7669 S787s TMT10 783 (R) SSSLsLSK (M) S(0.0)S(0.0)S(0.0)LS(0.99)LS(0.0)K K:TMT10,s:Phosphorylated S CENPJ 154195.7 1 8 1877.1 109.56 HUMAN 1 -29.1629 -26.205 PSSAGSVSPRSTSVT-p P13646;S427-p PSSAGSVSPRSTSVT 0.535927633673308 0.799998723074484 0.118 -0.0303333333333333 5.01480135708318 1.35519933670708 0.118 -0.0303333333333333 0.315151852491311 0.731947726779829 1.10676984960423 -0.360709881520661 P13646 KRT13 P13646.S427.p_KRT13 P13646_S427s _1_1_427_427 P13646 P13646 Keratin, type I cytoskeletal 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21012.21012.2 14.01 14.01 1.105 4 1 1 0 851.4168 1621.8569 S427s TMT10 416 (K) MIGFPSSAGSVsPR (S) MIGFPS(0.0)S(0.0)AGS(0.0)VS(0.99)PR s:Phosphorylated S KRT13 49929.7 4 25 383.3 334.07 HUMAN 1 5.0148 -1.3552 PSSDGKVSPGTLSIG-p Q96QT6;S701-p PSSDGKVSPGTLSIG 0.685043585085589 0.641133916754997 0.057 0.0533333333333334 3.08121342427123 2.62966230205743 0.057 0.0533333333333334 0.491902078417082 0.545800299685389 0.736859935420491 0.644049511769967 Q96QT6 PHF12 Q96QT6.S701.p_PHF12 Q96QT6_S701s_1_1_701_701 Q96QT6 Q96QT6|Q96QT6-3|Q96QT6-5|Q96QT6-4 PHD finger protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.36665.36665.4 11.11 11.11 1.16 14 1 1 0 1201.6145 4722.4701 S701s N719n TMT10 689 (R) FSSPAPSSDGKVsPGTLSIGSALTVPSFPAnSTAMVDLTNSLR (A) FS(0.0)S(0.0)PAPS(0.0)S(0.0)DGKVS(0.99)PGT(0.0)LS(0.0)IGS(0.0)ALT(0.0)VPS(0.0)FPAN(0.99)S(0.0)T(0.0)AMVDLT(0.0)N(0.0)S(0.0)LR K:TMT10,s:Phosphorylated S,n:Deamidated PHF12 111750.5 7 11 626.1 258.17 HUMAN 1 3.0812 2.6297 PSSDLDDSLTEEIDE-p Q8NCY6;S106-p PSSDLDDSLTEEIDE 0.142384306016613 0.240390123049076 -0.253 0.114 17.291551318614 8.15780999024677 -0.253 0.114 0.0186571313101829 0.152833655575377 -3.32028074823838 1.66198807217782 Q8NCY6 MSANTD4 Q8NCY6.S106.p_MSANTD4 Q8NCY6_S106s _1_1_106_106 Q8NCY6 Q8NCY6 Myb/SANT-like DNA-binding domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.33802.33802.4 20.62 15.17 1.637 5 1 1 0 776.1357 3021.5556 S106s TMT10 91 (K) LVGSGFPLPSSDLDDsLTEEIDEK (I) LVGS(0.0)GFPLPS(0.0)S(0.0)DLDDS(0.99)LT(0.0)EEIDEK K:TMT10,s:Phosphorylated S MSANTD4 41206 2 2 3411.1 51.74 HUMAN 1 -17.2916 8.1578 PSSDNADSPKSGPKE-p Q9NZN5;S309-p PSSDNADSPKSGPKE 0.733693204325823 0.789077787702177 0.0963333333333333 0.0363333333333334 2.54530145479438 1.42953680262451 0.0963333333333334 0.0363333333333334 0.556506004426972 0.719525715025278 0.626441716211049 0.378364533718233 Q9NZN5 ARHGEF12 Q9NZN5.S309.p_ARHGEF12 Q9NZN5_S309s _1_1_309_309 Q9NZN5 Q9NZN5|Q9NZN5-2|E9PMR6 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5282.5282.4 16.77 13.49 2.371 8 1 1 0 798.3778 3110.5263 S309s TMT10 292 (R) TDCSSGDASRPSSDNADsPKSGPK (E) T(0.0)DCS(0.0)S(0.0)GDAS(0.0)RPS(0.0)S(0.0)DNADS(0.99)PKS(0.0)GPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARHGEF12 174199.1 4 4 251.1 406.16 HUMAN 1 2.5453 1.4295 PSSDYDLSPAKQEPK-p Q6W2J9;S1410-p PSSDYDLSPAKQEPK 0.173995878042497 0.00728779850645978 -0.257333333333333 -0.509333333333333 15.1262049434399 30.5679090703964 -0.257333333333333 -0.509333333333333 0.0307170500714416 0.000877423158649472 -2.90215470220501 -6.59607271855214 Q6W2J9 BCOR Q6W2J9.S1410.p_BCOR Q6W2J9_S1410s _1_1_1410_1410 Q6W2J9 Q6W2J9|Q6W2J9-2|Q6W2J9-4 BCL-6 corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13189.13189.4 14.38 9.67 5.304 4 1 1 0 832.4321 3246.7362 S1410s TMT10 1400 (K) RPEPSSDYDLsPAKQEPKPFDR (L) RPEPS(0.0)S(0.0)DY(0.0)DLS(0.99)PAKQEPKPFDR K:TMT10,s:Phosphorylated S BCOR 193725.6 2 12 459.1 305.76 HUMAN 1 -15.1262 -30.5679 PSSEHRRSHGLESVP-p Q641Q2;S996-p PSSEHRRSHGLESVP 0.814399806622497 0.950371224499073 -0.039 -0.00733333333333332 1.7103383229022 0.317191186394457 -0.039 -0.00733333333333332 0.674475482846266 0.929567393125045 -0.443653970014642 -0.0925726255094124 Q641Q2 FAM21A Q641Q2.S996.p_FAM21A Q641Q2_S996s _1_1_996_996 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2|Q9Y4E1-4|Q9Y4E1-2|E7ESD2|Q9Y4E1-6|Q9Y4E1-3|J3KP36|F8W7U3|A0A087WYF6|Q9Y4E1-5 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25673.25673.4 23.03 25.32 1.361 6 1 1 0 982.2506 3846.0074 S996s TMT10 996 (R) sHGLESVPVLPGSGEAGVSFDLPAQADTLHSANK (S) S(0.99)HGLES(0.0)VPVLPGS(0.0)GEAGVS(0.0)FDLPAQADT(0.0)LHS(0.0)ANK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 6 53 12.1 1178.3 HUMAN 1 -1.7103 -0.3172 PSSELAHSPTNSGKK-p Q86YV5;S782-p PSSELAHSPTNSGKK 0.0948633510902073 0.316075238040637 -0.325 -0.112 21.7180140631406 6.60889463480877 -0.325 -0.112 0.00673284464654819 0.218328553040014 -4.25774248222729 -1.39199990281486 Q86YV5 SGK223 Q86YV5.S782.p_SGK223 Q86YV5_S782s _1_1_782_782 Q86YV5 Q86YV5 Tyrosine-protein kinase PRAG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7354.7354.4 16.09 15.17 2.369 7 1 1 0 721.8585 2804.4452 S782s TMT10 769 (R) TCSDGGPSSELAHsPTNSGKK (L) T(0.0)CS(0.0)DGGPS(0.0)S(0.0)ELAHS(0.99)PT(0.0)NS(0.0)GKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRAG1 152359.5 1 14 223.1 426.19 HUMAN 1 -21.718 -6.6089 PSSGAWGSAASLGRG-p Q5FWE3;S774-p PSSGAWGSAASLGRG 0.957246455101486 0.452734613054459 0.00899999999999999 -0.0796666666666666 0.369445137433395 4.58611034787533 0.00899999999999999 -0.0796666666666666 0.918449931829646 0.347847563120365 0.107256579243816 -1.027440065465 Q5FWE3 PRRT3 Q5FWE3.S774.p_PRRT3 Q5FWE3_S774sS777s_2_2_774_777 Q5FWE3 Q5FWE3|Q5FWE3-2 Proline-rich transmembrane protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21679.21679.4 8.71 5.76 1.117 8 2 2 0 1009.9919 3877.0266 S774s S777s TMT10 753 (K) SLIRNPAESGQLATPSSGAWGsAAsLGRGPQGGPGLSR (N) S(0.0)LIRNPAES(0.0)GQLAT(0.0)PS(0.0)S(0.0)GAWGS(0.99)AAS(0.99)LGRGPQGGPGLS(0.0)R s:Phosphorylated S PRRT3 102765.9 2 11 931.1 199.28 HUMAN 1 0.3694 -4.5861 PSSGDEDSDDASSHR-p Q9UKJ3;S820-p PSSGDEDSDDASSHR 0.621295713198345 0.696484843776687 0.099 0.126666666666667 3.84345279392098 2.15894358718954 0.099 0.126666666666667 0.412719245199726 0.608282946918205 0.887084672261126 0.543655441811802 Q9UKJ3 GPATCH8 Q9UKJ3.S820.p_GPATCH8 Q9UKJ3_S814sS815sS820s_3_3_814_820 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3037.3037.3 10.85 10.85 3.546 6 3 3 0 749.2564 2005.8533 S814s S815s S820s TMT10 811 (R) SQPssGDEDsDDASSHR (L) S(0.0)QPS(0.99)S(0.99)GDEDS(0.99)DDAS(0.0)S(0.0)HR s:Phosphorylated S GPATCH8 165107.3 1 22 231.1 422.52 HUMAN 1 3.8435 2.1589 PSSHRRASPGLSMPS-p P57682;S92-p PSSHRRASPGLSMPS 0.404577762556746 0.0127296625795089 0.118 0.38 7.25699460439995 26.4164311066787 0.118 0.38 0.188061778779612 0.00228221675444356 1.50592800749046 5.40444542912389 P57682 KLF3 P57682.S92.p_KLF3 P57682_S92s _1_1_92_92 P57682 P57682|P57682-2 Krueppel-like factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16302.16302.3 15.65 11.69 2.328 5 1 1 0 717.3874 2070.1782 S92s TMT10 90 (R) RAsPGLSMPSSSPPIK (K) RAS(0.99)PGLS(0.0)MPS(0.0)S(0.0)S(0.0)PPIK K:TMT10,s:Phosphorylated S KLF3 39170.3 2 24 394.2 330.8 HUMAN 1 7.257 26.4164 PSSKAPRSPPVGSGP-p Q9HD15;S87-p PSSKAPRSPPVGSGP 0.400487551853052 0.857602949541571 -0.119666666666667 -0.0273333333333333 7.33230188351491 0.939756024985556 -0.119666666666667 -0.0273333333333333 0.184828871404885 0.805423686474869 -1.5190646343298 -0.258672560101444 Q9HD15 SRA1 Q9HD15.S87.p_SRA1 Q9HD15_S87s _1_1_87_87 Q9HD15 Q9HD15 Steroid receptor RNA activator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36850.36850.4 31.62 30.31 1.639 6 1 1 0 1218.8405 4792.376 S87s TMT10 84 (K) APRsPPVGSGPASGVEPTSFPVESEAVMEDVLRPLEQALEDCR (G) APRS(0.99)PPVGS(0.0)GPAS(0.0)GVEPT(0.0)S(0.0)FPVES(0.0)EAVMEDVLRPLEQALEDCR C:Carbamidomethylation,s:Phosphorylated S SRA1 25843.7 10 2 1496.1 136.55 HUMAN 1 -7.3323 -0.9398 PSSNPTPSPLDASPR-p Q01970;S911-p PSSNPTPSPLDASPR 0.373935912464191 0.877752670779461 0.205666666666667 -0.0336666666666667 7.91087343583914 0.796142848698605 0.205666666666667 -0.0336666666666667 0.161775464852431 0.832502823509137 1.61969564132285 -0.221909822680144 Q01970 PLCB3 Q01970.S911.p_PLCB3 Q01970_S911s_1_1_911_911 Q01970 Q01970|Q01970-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25605.25605.5 22.31 21.15 2.783 10 1 1 0 978.8604 4809.3071 N907n S911s TMT10 875 (R) QLAALIGESEAQAGQETCQDTQSQQLGSQPSSnPTPsPLDASPR (R) QLAALIGES(0.0)EAQAGQET(0.0)CQDT(0.0)QS(0.0)QQLGS(0.0)QPS(0.0)S(0.0)N(1.0)PT(0.0)PS(0.99)PLDAS(0.0)PR C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S PLCB3 139595.3 2 4 1609.1 127.8 HUMAN 1 7.9109 -0.7961 PSSPASPSPKGTPEK-p Q9H4G0-4;S503-p PSSPASPSPKGTPEK 0.57602742215752 0.00272422972588299 0.086 -1.556 4.40622660479291 38.9537793477461 0.086 -1.556 0.362557872318353 0.000127239532634773 0.99402644184264 -9.67059935089282 Q9H4G0 EPB41L1 Q9H4G0.4.S503.p_EPB41L1 Q9H4G0-4_S503sT507t_2_2_503_507 Q9H4G0-4 Q9H4G0-4 Isoform 4 of Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12184.12184.5 10.77 8.67 2.585 5 2 2 0 690.9771 3290.9242 S503s T507t TMT10 494 (R) RLPSSPASPsPKGtPEKANEPVK (T) RLPS(0.0)S(0.0)PAS(0.0)PS(0.99)PKGT(0.99)PEKANEPVK K:TMT10,s:Phosphorylated S,t:Phosphorylated T EPB41L1 79286.2 3 35 174.4 483.37 HUMAN 1 4.4062 -38.9538 PSSPRPLSPVPHVNN-p Q06190;S692-p PSSPRPLSPVPHVNN 0.372507729009431 0.416418908734533 0.135 0.0770000000000001 7.95722466086115 5.06053404712613 0.135 0.0770000000000001 0.160058054558214 0.31185060812676 1.62773933209127 1.11491215310828 Q06190 PPP2R3A Q06190.S692.p_PPP2R3A Q06190_S692s_1_1_692_692 Q06190 Q06190|Q06190-2 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27448.27448.4 17.38 17.38 5.471 2 1 1 0 665.1188 2576.4874 S692s N702n TMT10 690 (R) PLsPVPHVNNVVnAPLSINIPR (F) PLS(0.99)PVPHVN(0.0)N(0.0)VVN(0.99)APLS(0.0)IN(0.0)IPR s:Phosphorylated S,n:Deamidated PPP2R3A 131701.6 3 5 2307.1 88.72 HUMAN 1 7.9572 5.0605 PSSPRSNTPMGDKDD-p Q5T4S7-2;T2724-p PSSPRSNTPMGDKDD 0.200797395490016 0.0452664289258507 -0.398333333333333 0.338333333333333 13.5516146570836 17.9886827362261 -0.398333333333333 0.338333333333333 0.0441406307039068 0.0158902864568582 -2.6109562404312 3.45714722703562 Q5T4S7 UBR4 Q5T4S7.2.T2724.p_UBR4 Q5T4S7-2_T2724t _1_1_2724_2724 Q5T4S7-2 Q5T4S7-2|Q5T4S7-4|Q5T4S7-3 Isoform 2 of E3 ubiquitin-protein ligase UBR4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9557.9557.3 15.49 15.49 2.192 2 1 1 0 955.7487 2785.2561 T2724t TMT10 2722 (R) SNtPMGDKDDDDDDDADEK (M) S(0.0)NT(0.99)PMGDKDDDDDDDADEK K:TMT10,t:Phosphorylated T UBR4 583136.9 2 14 528.1 281.83 HUMAN 1 -13.5516 17.9887 PSSPTPESPTMLTKK-p Q9NQS7;S148-p PSSPTPESPTMLTKK 0.352645276788012 0.0679298566354982 -0.146333333333333 -0.219666666666667 8.40607261526532 15.5385895255842 -0.146333333333333 -0.219666666666667 0.144342006611952 0.0279345093342658 -1.70554068699711 -2.97805818803621 Q9NQS7 INCENP Q9NQS7.S148.p_INCENP Q9NQS7_S148s_1_1_148_148 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25659.25659.4 21.13 21.13 1.261 7 1 1 0 789.1581 3057.6365 M136m S148s TMT10 127 (R) AAAAAAAATmALAAPSSPTPEsPTMLTK (K) AAAAAAAAT(0.0)M(0.99)ALAAPS(0.0)S(0.0)PT(0.0)PES(0.99)PT(0.0)M(0.0)LT(0.0)K K:TMT10,m:Oxidized methionine,s:Phosphorylated S INCENP 105826.3 4 5 138.1 524.38 HUMAN 1 -8.4061 -15.5386 PSSRGSLTPHPAACD-p P55201-2;T852-p PSSRGSLTPHPAACD 0.949984753800772 0.0901618401314303 0.011 0.212333333333333 0.441110568783494 13.8276895654817 0.011 0.212333333333333 0.903418423908241 0.041421998008655 0.127142916979872 2.65976441063006 P55201 BRPF1 P55201.2.T852.p_BRPF1 P55201-2_T852t _1_1_852_852 P55201-2 P55201-2|P55201-3|P55201-4 Isoform 2 of Peregrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8145.8145.3 13.25 13.25 2.204 2 1 1 0 597.9672 1711.9202 T852t TMT10 849 (R) GSLtPHPAACDK (D) GS(0.0)LT(0.99)PHPAACDK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T BRPF1 139837.6 1 7 723.1 237.03 HUMAN 1 0.4411 13.8277 PSSRKAKSPAPGLAS-p Q9Y618;S2424-p PSSRKAKSPAPGLAS 0.78776392544686 0.424524202830334 -0.0436666666666667 0.0916666666666667 2.00063501853737 4.95322659089096 -0.0436666666666667 0.0916666666666667 0.630865093637616 0.319651937317792 -0.508942665140368 1.09525999774571 Q9Y618 NCOR2 Q9Y618.S2424.p_NCOR2 Q9Y618_S2424s _1_1_2424_2424 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8237.8237.5 18.79 14.32 5.594 6 1 1 0 706.7525 3449.7708 S2424s TMT10 2422 (K) AKsPAPGLASGDRPPSVSSVHSEGDCNRR (T) AKS(0.99)PAPGLAS(0.0)GDRPPS(0.0)VS(0.0)S(0.0)VHS(0.0)EGDCNRR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NCOR2 275540.8 4 39 16.1 1053.89 HUMAN 1 -2.0006 4.9532 PSSRRVWSPPRVHKV-p O15209;S616-p PSSRRVWSPPRVHKV 0.338038342621858 0.00219928027114295 -0.136 0.820333333333333 8.77027964573727 41.2555024318588 -0.136 0.820333333333334 0.132730898847637 7.48944708676325e-05 -1.76859801938689 10.7107403377962 O15209 ZBTB22 O15209.S616.p_ZBTB22 O15209_S616s _1_1_616_616 O15209 O15209 Zinc finger and BTB domain-containing protein 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10853.10853.4 7.59 7.59 99 1 1 1 0 450.761 1720.0535 S616s TMT10 613 (R) RVWsPPRVHK (V) RVWS(1.0)PPRVHK K:TMT10,s:Phosphorylated S ZBTB22 66342.9 1 3 3284.2 55.02 HUMAN 1 -8.7703 41.2555 PSSSLPQTPEQEKFL-p O43379-4;T1053-p PSSSLPQTPEQEKFL 0.334991410736759 0.00640463272884602 -0.144 -0.617333333333333 8.86324470137205 31.5494674531436 -0.144 -0.617333333333333 0.129919855798623 0.000699927818300789 -1.78469011711471 -6.90606248912702 O43379 WDR62 O43379.4.T1053.p_WDR62 O43379-4_T1053t _1_1_1053_1053 O43379-4 O43379-4 Isoform 4 of WD repeat-containing protein 62 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29005.29005.4 22.39 22.39 1.705 9 1 1 0 1190.5753 4679.3227 T1053t TMT10 1019 (R) FATSLPHFPGCAGPTEDELSLPEGPSVPSSSLPQtPEQEK (F) FAT(0.0)S(0.0)LPHFPGCAGPT(0.0)EDELS(0.0)LPEGPS(0.0)VPS(0.0)S(0.0)S(0.0)LPQT(0.99)PEQEK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T WDR62 168676.3 1 4 671.1 248.72 HUMAN 1 -8.8632 -31.5495 PSSSPPITPPASETK-p Q9NZJ0;T516-p PSSSPPITPPASETK 0.145152146047681 0.00227464949884667 -0.276333333333333 -0.875333333333333 17.0721859734363 40.8509765718579 -0.276333333333333 -0.875333333333334 0.0196237228973457 8.22057777978388e-05 -3.27686599600488 -10.5208231585872 Q9NZJ0 DTL Q9NZJ0.T516.p_DTL Q9NZJ0_T516t _1_1_516_516 Q9NZJ0 Q9NZJ0|F5GZ90 Denticleless protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13498.13498.3 16.6 16.6 2.417 7 1 1 0 712.3749 2055.1374 T516t TMT10 508 (R) TPSSSPPItPPASETK (I) T(0.0)PS(0.0)S(0.0)S(0.0)PPIT(0.99)PPAS(0.0)ET(0.0)K K:TMT10,t:Phosphorylated T DTL 80892.7 1 10 461.1 305.23 HUMAN 1 -17.0722 -40.851 PSSSRAESPGPGSRL-p O75592;S2774-p PSSSRAESPGPGSRL 0.160068844152597 0.926905875789231 0.272 -0.011 15.927177381013 0.465823715858703 0.272 -0.011 0.0255436092428932 0.898292199499433 3.05422003186171 -0.133925484599134 O75592 MYCBP2 O75592.S2774.p_MYCBP2 O75592_S2774s _1_1_2774_2774 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3489.3489.2 8.65 6.54 1.106 5 1 1 0 791.8371 1502.7016 S2774s Hydrogen 2766 (R) MPSSSRAEsPGPGSR (L) MPS(0.0)S(0.0)S(0.0)RAES(0.99)PGPGS(0.0)R s:Phosphorylated S MYCBP2 518176.7 2 9 252.1 405.77 HUMAN 1 15.9272 -0.4658 PSSSRAHSPMIAVGS-p Q96EE3-1;S179-p PSSSRAHSPMIAVGS 0.58471981560589 0.369731857493161 0.0823333333333333 0.085 4.286168305713 5.73107350839609 0.0823333333333333 0.085 0.372720405069992 0.267234576471686 0.971450753854919 1.23622279043267 Q96EE3 SEH1L Q96EE3.1.S179.p_SEH1L Q96EE3-1_S179s _1_1_179_179 Q96EE3-1 Q96EE3-1 Isoform B of Nucleoporin SEH1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14768.14768.3 20.2 20.2 12.614 4 1 1 0 842.0717 2444.2314 S179s TMT10 177 (R) AHsPMIAVGSDDSSPNAMAK (V) AHS(0.99)PMIAVGS(0.0)DDS(0.0)S(0.0)PNAMAK K:TMT10,s:Phosphorylated S SEH1L 47148.1 3 2 4335.1 33.31 HUMAN 1 4.2862 5.7311 PSSSRPISPGLSYAS-p Q16204;S367-p PSSSRPISPGLSYAS 0.676544499697039 0.591244655148634 0.0606666666666667 -0.0513333333333333 3.17848240096546 3.08844587969501 0.0606666666666667 -0.0513333333333333 0.481007402356279 0.491083578689315 0.756436697722059 -0.738214729043767 Q16204 CCDC6 Q16204.S367.p_CCDC6 Q16204_S367s _1_1_367_367 Q16204 Q16204 Coiled-coil domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24782.24782.4 23.84 23.84 1.113 18 1 1 0 1085.5519 4259.2186 S367s TMT10 349 (R) TVSSPIPYTPSPSSSRPIsPGLSYASHTVGFTPPTSLTR (A) T(0.0)VS(0.0)S(0.0)PIPY(0.0)T(0.0)PS(0.0)PS(0.0)S(0.0)S(0.0)RPIS(0.99)PGLS(0.0)Y(0.0)AS(0.0)HT(0.0)VGFT(0.0)PPT(0.0)S(0.0)LT(0.0)R s:Phosphorylated S CCDC6 53461.2 9 11 423.1 319.68 HUMAN 1 3.1785 -3.0884 PSSVLWLSPSTALAA-p Q96R06;S249-p PSSVLWLSPSTALAA 0.424423741955174 0.874910155219541 0.127666666666667 0.0526666666666667 6.86105502168295 0.817144861810388 0.127666666666667 0.0526666666666667 0.206012938994137 0.828486648294371 1.43666903465691 0.227338640578903 Q96R06 SPAG5 Q96R06.S249.p_SPAG5 Q96R06_S249s _1_1_249_249 Q96R06 Q96R06 Sperm-associated antigen 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37232.37232.4 28 23.46 1.389 8 1 1 0 1022.0152 4005.0807 S249s TMT10 225 (R) TEAVREDLVPSESNAFLPSSVLWLsPSTALAADFR (V) T(0.0)EAVREDLVPS(0.0)ES(0.0)NAFLPS(0.0)S(0.0)VLWLS(0.99)PS(0.0)T(0.0)ALAADFR s:Phosphorylated S SPAG5 135788.8 1 6 612.1 261.64 HUMAN 1 6.8611 0.8171 PSTAIQGTPPSVPGL-p E9PGC8;T814-p PSTAIQGTPPSVPGL 0.96123021845501 0.873391882526886 0.00733333333333333 -0.0303333333333333 0.330364661542404 0.827612725705233 0.00733333333333332 -0.0303333333333333 0.926752004061359 0.826492139380152 0.0962951795762931 -0.230037607309716 E9PGC8 NotFound E9PGC8.T814.p_NotFound E9PGC8_T814t _1_1_814_814 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.26446.26446.5 27.88 23.68 2.23 6 1 1 0 994.3074 4887.5329 T814t TMT10 789 (R) DTGLGDKPFPLDTAEEGPPSTAIQGtPPSVPGLGQEEHVMK (E) DT(0.0)GLGDKPFPLDT(0.0)AEEGPPS(0.0)T(0.0)AIQGT(0.99)PPS(0.0)VPGLGQEEHVMK K:TMT10,t:Phosphorylated T MAP1A 332906.7 2 8 20.1 1016.98 HUMAN 1 0.3304 -0.8276 PSTAPAPSPPAPKSC-p Q6NV74;S490-p PSTAPAPSPPAPKSC 0.496097721460816 0.182766279542745 0.135 0.133 5.60522874032786 9.70946981313029 0.135 0.133 0.275091471212834 0.10691853974499 1.21390446761078 1.93052142651955 Q6NV74 KIAA1211L Q6NV74.S490.p_KIAA1211L Q6NV74_S490s _1_1_490_490 Q6NV74 Q6NV74 Uncharacterized protein KIAA1211-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15494.15494.3 10.86 10.86 4.201 4 1 1 0 719.3842 2076.1741 S490s TMT10 479 (R) IGTEPSTAPAPsPPAPK (S) IGT(0.0)EPS(0.0)T(0.0)APAPS(0.99)PPAPK K:TMT10,s:Phosphorylated S KIAA1211L 102725.9 3 5 756.1 230.87 HUMAN 1 5.6052 9.7095 PSTDEQTSSAEEDVP-p Q8N556-2;S342-p PSTDEQTSSAEEDVP 0.648120240178882 0.591248469257856 -0.0646666666666667 0.0626666666666667 3.5287240689537 3.08783373409775 -0.0646666666666667 0.0626666666666667 0.443738992627695 0.491152802649135 -0.825900044811131 0.738091200540063 Q8N556 AFAP1 Q8N556.2.S342.p_AFAP1 Q8N556-2_S342sS343s_2_2_342_343 Q8N556-2 Q8N556-2 Isoform 2 of Actin filament-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21279.21279.5 18.09 18.09 1.175 9 2 2 0 812.7909 3899.99 S342s S343s TMT10 333 (K) KKPSTDEQTssAEEDVPTCGYLNVLSNSR (W) KKPS(0.0)T(0.0)DEQT(0.0)S(0.99)S(0.99)AEEDVPT(0.0)CGY(0.0)LNVLS(0.0)NS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S AFAP1 90706.1 6 10 854.1 211.2 HUMAN 1 -3.5287 3.0878 PSTGSLDSGNESKEK-p Q15057;S387-p PSTGSLDSGNESKEK 0.268452138249062 0.56722869133543 -0.198666666666667 0.055 10.8280872083117 3.32070596769631 -0.198666666666667 0.055 0.0826401847023369 0.465510416294256 -2.12601813076865 0.784714336392416 Q15057 ACAP2 Q15057.S387.p_ACAP2 Q15057_S387s _1_1_387_387 Q15057 Q15057|A0A087X1H5 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8354.8354.3 18.28 18.28 4.903 7 1 1 0 783.4035 2268.2286 S387s TMT10 377 (K) KSSPSTGSLDsGNESK (E) KS(0.0)S(0.0)PS(0.0)T(0.0)GS(0.0)LDS(0.99)GNES(0.0)K K:TMT10,s:Phosphorylated S ACAP2 88997 3 5 629.1 257.13 HUMAN 1 -10.8281 3.3207 PSTIRPASPVAGSPK-p Q13057-2;S207-p PSTIRPASPVAGSPK 0.810035198209422 0.0726139314077081 0.034 0.264666666666667 1.75640059067557 15.1368382136898 0.034 0.264666666666667 0.667359644158372 0.0306419344108111 0.454152901060927 2.90223984917511 Q13057 COASY Q13057.2.S207.p_COASY Q13057-2_S207s _1_1_207_207 Q13057-2 Q13057-2 Isoform 2 of Bifunctional coenzyme A synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9187.9187.3 11.06 4.6 7.479 2 1 1 0 643.6958 1849.106 S207s TMT10 205 (R) PAsPVAGSPKQPVR (G) PAS(0.99)PVAGS(0.0)PKQPVR K:TMT10,s:Phosphorylated S COASY 65680.5 44 3 1348.1 151.04 HUMAN 1 1.7564 15.1368 PSTPRGASPLGPGSA-p Q6P1R3;S48-p PSTPRGASPLGPGSA 0.747657915422397 0.965508381695265 0.0566666666666666 -0.00566666666666666 2.39868303174586 0.218180885159118 0.0566666666666667 -0.00566666666666667 0.575614462015029 0.95100305372523 0.595388787603358 -0.064342615460528 Q6P1R3 MSANTD2 Q6P1R3.S48.p_MSANTD2 Q6P1R3_S48s _1_1_48_48 Q6P1R3 Q6P1R3|Q6P1R3-3|E9PPE2|B4E1M0 Myb/SANT-like DNA-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21934.21934.3 16.35 16.35 4.427 4 1 1 0 844.7639 2452.3106 S48s TMT10 46 (R) GAsPLGPGSAAGSGAAASGGLGLGLGGR (S) GAS(0.99)PLGPGS(0.0)AAGS(0.0)GAAAS(0.0)GGLGLGLGGR s:Phosphorylated S MSANTD2 61945.8 6 3 1991.1 103.76 HUMAN 1 2.3987 -0.2182 PSTPVPPSPAPAPGL-p Q96EZ8;S108-p PSTPVPPSPAPAPGL 0.788556245854916 0.129716163070945 -0.043 -0.174 1.98884995318435 11.690286728254 -0.043 -0.174 0.63257934131048 0.0677596770097177 -0.506331364451966 -2.27641599072476 Q96EZ8 MCRS1 Q96EZ8.S108.p_MCRS1 Q96EZ8_S108s _1_1_108_108 Q96EZ8 Q96EZ8-2|Q96EZ8-3 Microspherule protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18767.18971.3 17.01 17.01 5.84 4 1 1 0 741.7455 2143.2527 S108s TMT10 100 (K) APSTPVPPsPAPAPGLTK (R) APS(0.0)T(0.0)PVPPS(0.99)PAPAPGLT(0.0)K K:TMT10,s:Phosphorylated S MCRS1 52030.6 4 4 892.1 204.48 HUMAN 1 -1.9888 -11.6903 PSTSDGGTDSPGTAS-p Q9Y597;T784-p PSTSDGGTDSPGTAS 0.201694340984261 0.00254880172900523 -0.223333333333333 -0.712666666666667 13.5078228416757 39.6493504059225 -0.223333333333333 -0.712666666666667 0.0445879715996857 0.000108408905404241 -2.60298920338967 -9.9747544797879 Q9Y597 KCTD3 Q9Y597.T784.p_KCTD3 Q9Y597_T784tS793s_2_2_784_793 Q9Y597 Q9Y597|Q9Y597-2|Q9Y597-3 BTB/POZ domain-containing protein KCTD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15791.15791.5 21.06 21.06 1.111 12 2 2 0 780.2001 3737.0415 T784t S793s TMT10 768 (R) KKVPYLASSPSTSDGGtDSPGTASPsPTK (T) KKVPY(0.0)LAS(0.0)S(0.0)PS(0.0)T(0.0)S(0.0)DGGT(0.99)DS(0.0)PGT(0.0)AS(0.0)PS(0.99)PT(0.0)K K:TMT10,t:Phosphorylated T,s:Phosphorylated S KCTD3 89667 13 18 417.1 320.81 HUMAN 1 -13.5078 -39.6494 PSTSKAVSPPHLDGP-p P29590-8;S518-p PSTSKAVSPPHLDGP 0.367750908113589 0.447511323723131 0.271 -0.135 8.05955277233434 4.65419907821393 0.271 -0.135 0.156330862070923 0.342436533626062 1.64548988374225 -1.0400911934483 P29590 PML P29590.8.S518.p_PML P29590-8_S518s _1_1_518_518 P29590-8 P29590|P29590-11|P29590-8|P29590-3 Isoform PML-2 of Protein PML HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13521.13521.3 10.78 10.78 10.779 2 1 1 0 579.295 1655.9067 S518s TMT10 516 (K) AVsPPHLDGPPSPR (S) AVS(0.99)PPHLDGPPS(0.0)PR s:Phosphorylated S PML 92374.1 1 11 777.1 226.8 HUMAN 1 8.0596 -4.6542 PSTSSVTSDEKVDYV-p Q9UQC2;S637-p PSTSSVTSDEKVDYV 0.120581410713125 0.367335984254396 -0.599333333333333 0.131 19.0963499645052 5.76798486455886 -0.599333333333333 0.131 0.0123130318695909 0.264972933333948 -3.6876449869776 1.24283453272632 Q9UQC2 GAB2 Q9UQC2.S637.p_GAB2 Q9UQC2_S637s _1_1_637_637 Q9UQC2 Q9UQC2|Q9UQC2-2 GRB2-associated-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15353.15353.4 12.31 12.31 1.156 7 1 1 0 802.9359 3128.7497 S637s TMT10 629 (R) KPSTSSVTsDEKVDYVQVDK (E) KPS(0.0)T(0.0)S(0.0)S(0.0)VT(0.0)S(0.99)DEKVDY(0.0)VQVDK K:TMT10,s:Phosphorylated S GAB2 74969.7 2 16 698.1 241.06 HUMAN 1 -19.0963 5.768 PSTVSTPSPSADLLG-p O95782;S655-p PSTVSTPSPSADLLG 0.623010933774293 0.0417092778835858 0.0653333333333333 0.257666666666667 3.81848665343918 18.4923885548515 0.0653333333333333 0.257666666666667 0.415098663098951 0.0141501532859042 0.88227019196362 3.55959463193577 O95782 AP2A1 O95782.S655.p_AP2A1 O95782_S655s _1_1_655_655 O95782 O95782|O95782-2 AP-2 complex subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22030.22030.4 24.62 24.62 2 10 1 1 0 1158.564 4551.2219 S655s TMT10 621 (K) GPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPsPSADLLGLR (A) GPGAGS(0.0)ALDDGRRDPS(0.0)S(0.0)NDINGGMEPT(0.0)PS(0.0)T(0.0)VS(0.0)T(0.0)PS(0.99)PS(0.0)ADLLGLR s:Phosphorylated S AP2A1 108628 44 3 1590.1 129.37 HUMAN 1 3.8185 18.4924 PSTYAHLSPAKTPPP-p Q86X29-6;S176-p PSTYAHLSPAKTPPP 0.0982861688091806 0.349511122055786 -0.356666666666667 -0.149 21.3278379588788 6.05346587029288 -0.356666666666667 -0.149 0.00736573693514207 0.248115224105356 -4.16989216048413 -1.2937721490648 Q86X29 LSR Q86X29.6.S176.p_LSR Q86X29-6_S176s _1_1_176_176 Q86X29-6 Q86X29|Q86X29-4|Q86X29-3|S4R3V8|Q86X29-2|Q86X29-5|Q86X29-6 Isoform 6 of Lipolysis-stimulated lipoprotein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21571.21571.3 19.62 16.94 1.112 8 1 1 0 909.8119 2647.4496 S176s TMT10 158 (K) AATSGVPSIYAPSTYAHLsPAK (T) AAT(0.0)S(0.0)GVPS(0.0)IY(0.0)APS(0.0)T(0.0)Y(0.0)AHLS(0.99)PAK K:TMT10,s:Phosphorylated S LSR 54725.6 1 2 206.1 448.79 HUMAN 1 -21.3278 -6.0535 PSVANVGSHCDLSLK-p P21333-2;S2150-p PSVANVGSHCDLSLK 0.155306054967913 0.0320849526179946 -0.388666666666667 0.306666666666667 16.2486509851513 20.1577819405282 -0.388666666666667 0.306666666666667 0.0237211042127021 0.00964321402919813 -3.116080619704 3.90919929443446 P21333 FLNA P21333.2.S2150.p_FLNA P21333-2_S2150s _1_1_2150_2150 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13642.13642.4 14.25 14.25 3.396 3 1 1 0 588.0612 2269.2487 S2150s TMT10 2141 (R) RAPSVANVGsHCDLSLK (I) RAPS(0.0)VANVGS(0.99)HCDLS(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FLNA 282751.6 1 17 198.1 454.47 HUMAN 1 -16.2487 20.1578 PSVARISSIPHDLCH-p Q9P246-2;S814-p PSVARISSIPHDLCH 0.761380727443584 0.0198070948003416 0.0456666666666667 -0.361 2.27067827045464 23.3661378075809 0.0456666666666667 -0.361 0.592832730189928 0.00460666063033736 0.567944955613668 -4.63621967419748 Q9P246 STIM2 Q9P246.2.S814.p_STIM2 Q9P246-2_S814s_1_1_814_814 Q9P246-2 Q9P246-2|H0Y860|A0A1W2PRA1|A0A1X7SBY3 Isoform 2 of Stromal interaction molecule 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14714.14714.3 16.77 16.77 1.146 2 1 1 0 716.0181 2065.0901 S814s N822n TMT10 812 (R) ISsIPHDLCHnGEK (S) IS(0.0)S(0.99)IPHDLCHN(1.0)GEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated STIM2 94867.7 6 8 1100.1 177.78 HUMAN 1 2.2707 -23.3661 PSVATVGSICDLNLK-p O75369-8;S2144-p PSVATVGSICDLNLK 0.0428370985731628 0.0739469982719304 -0.680666666666667 0.578 30.4896251799622 15.0118130279472 -0.680666666666667 0.578 0.000893382584239589 0.0315368779389909 -6.58248739483476 2.87878666604037 O75369 FLNB O75369.8.S2144.p_FLNB O75369-8_S2144s _1_1_2144_2144 O75369-8 O75369-8|O75369-9|O75369-2|O75369-7|E7EN95|O75369-4|O75369-5 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25161.25161.3 17.78 17.78 2.986 3 1 1 0 728.3902 2103.1884 S2144s TMT10 2136 (R) APSVATVGsICDLNLK (I) APS(0.0)VAT(0.0)VGS(0.99)ICDLNLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FLNB 283797.6 2 37 67.1 680.07 HUMAN 1 -30.4896 15.0118 PSVDFNHSDDFTPIS-p Q6R327-3;S1144-p PSVDFNHSDDFTPIS 0.390987808375823 0.0304837664952524 -0.203333333333333 -0.315333333333333 7.53456019254385 20.4879647411557 -0.203333333333333 -0.315333333333333 0.176418441334375 0.00893724216653898 -1.55429811736502 -3.98062289690474 Q6R327 RICTOR Q6R327.3.S1144.p_RICTOR Q6R327-3_S1144s_1_1_1144_1144 Q6R327-3 Q6R327-3 Isoform 3 of Rapamycin-insensitive companion of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23938.23938.3 14.27 14.27 2.329 7 1 1 0 1039.8466 3036.5566 N1142n S1144s TMT10 1133 (R) TLTEPSVDFnHsDDFTPISTVQK (T) T(0.0)LT(0.0)EPS(0.0)VDFN(1.0)HS(0.99)DDFT(0.0)PIS(0.0)T(0.0)VQK K:TMT10,n:Deamidated,s:Phosphorylated S RICTOR 197118.3 1 5 452.1 308.36 HUMAN 1 -7.5346 -20.488 PSVEPPLSQETFSDL-p P04637;S15-p PSVEPPLSQETFSDL 0.26952318340633 0.0247429756117273 0.163 0.341666666666667 10.7920497399843 21.8560555576783 0.163 0.341666666666667 0.0833287804888913 0.00652220498797937 2.11971674382399 4.28459763454561 P04637 TP53 P04637.S15.p_TP53 P04637_S15s _1_1_15_15 P04637 P04637|A0A087WZU8|P04637-3|J3KP33|P04637-2|E7EQX7 Cellular tumor antigen p53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.36462.36462.2 17.2 17.24 1.651 5 1 1 0 1564.2019 3047.4393 S15s Acetyl 1 (-) MEEPQSDPSVEPPLsQETFSDLWK (L) MEEPQS(0.0)DPS(0.0)VEPPLS(0.99)QET(0.0)FS(0.0)DLWK K:TMT10,s:Phosphorylated S TP53 44223 7 2 1419.1 144.35 HUMAN 1 10.792 21.8561 PSVETLDSPTGSHVE-p F8WA39;S49-p PSVETLDSPTGSHVE 0.890988784685547 0.110740343398409 0.0226666666666667 -0.185666666666667 0.979745178055419 12.617962132226 0.0226666666666667 -0.185666666666667 0.798041510916961 0.0547272702924013 0.268789973134296 -2.4411556462722 F8WA39 MTMR1 F8WA39.S49.p_MTMR1 F8WA39_S49s _1_1_49_49 F8WA39 F8WA39|Q13613|Q13613-2|Q8NEC6|E9PPP8 Myotubularin-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17777.17777.3 17.17 17.17 1.232 5 1 1 0 899.1003 2615.3176 S49s TMT10 41 (R) QPSVETLDsPTGSHVEWCK (Q) QPS(0.0)VET(0.0)LDS(0.99)PT(0.0)GS(0.0)HVEWCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTMR1 76458.3 4 2 3783.1 43.12 HUMAN 1 0.9797 -12.618 PSVFGNDSDDDDETS-p Q9H0G5;S33-p PSVFGNDSDDDDETS 0.574777890570195 0.860715159833817 0.0776666666666666 0.0183333333333334 4.4222541558546 0.918446790605495 0.0776666666666667 0.0183333333333334 0.361222325656152 0.809385315727035 0.997031227653971 0.253269993216646 Q9H0G5 NSRP1 Q9H0G5.S33.p_NSRP1 Q9H0G5_S33s _1_1_33_33 Q9H0G5 Q9H0G5 Nuclear speckle splicing regulatory protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21033.21033.5 30.86 30.86 5.726 7 1 1 0 822.8025 4030.0042 S33s TMT10 16 (K) TQQLHPVLQKPSVFGNDsDDDDETSVSESLQR (E) T(0.0)QQLHPVLQKPS(0.0)VFGNDS(0.99)DDDDET(0.0)S(0.0)VS(0.0)ES(0.0)LQR K:TMT10,s:Phosphorylated S NSRP1 66617.1 12 1 900.1 203.68 HUMAN 1 4.4223 0.9184 PSVGSRNSPPEHLQE-p Q96L93-2;S1341-p PSVGSRNSPPEHLQE 0.602239550710979 0.765991610065628 -0.0913333333333333 -0.0303333333333333 4.06759508345653 1.59931885926485 -0.0913333333333333 -0.0303333333333333 0.391958865224226 0.691939485125662 -0.930028600086423 -0.418073903796272 Q96L93 KIF16B Q96L93.2.S1341.p_KIF16B Q96L93-2_S1341s _1_1_1341_1341 Q96L93-2 Q96L93-2 Isoform 2 of Kinesin-like protein KIF16B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32759.32759.4 15.63 12.63 3.368 5 1 1 0 1036.0294 4061.097 S1341s Hydrogen 1340 (R) NsPPEHLQEAPNVQLFTTPLYLQGSQNVAPEVWK (L) NS(0.99)PPEHLQEAPNVQLFT(0.0)T(0.0)PLY(0.0)LQGS(0.0)QNVAPEVWK K:TMT10-Lys-Only,s:Phosphorylated S KIF16B 160684.4 2 14 774.1 227.33 HUMAN 1 -4.0676 -1.5993 PSVISFGSKNRTIGV-p Q92598;S43-p PSVISFGSKNRTIGV 0.42487138016849 0.456970293199546 0.115666666666667 -0.094 6.85032062987269 4.53496381270204 0.115666666666667 -0.094 0.206522767905584 0.351968355265385 1.43478634818581 -1.01791380020978 Q92598 HSPH1 Q92598.S43.p_HSPH1 Q92598_S43s _1_1_43_43 Q92598 Q92598|Q92598-3|Q92598-2|R4GN69 Heat shock protein 105 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21252.21252.3 16.89 16.89 4.328 4 1 1 0 574.2976 1640.9082 S43s TMT10 34 (R) CTPSVISFGsK (N) CT(0.0)PS(0.0)VIS(0.0)FGS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HSPH1 97776.1 1 20 549.2 274.67 HUMAN 1 6.8503 -4.535 PSVKSELSPVARQTS-p P25054;S2283-p PSVKSELSPVARQTS 0.377890095383367 0.0755407135921702 0.152333333333333 -0.329333333333333 7.8111978331592 14.890853820511 0.152333333333333 -0.329333333333333 0.165531334641341 0.0324275858630503 1.60239048893236 -2.85615852332641 P25054 APC P25054.S2283.p_APC P25054_S2283s _1_1_2283_2283 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12000.12000.4 12.43 12.43 2.601 3 1 1 0 574.0864 2213.3585 S2283s TMT10 2273 (R) GAKPSVKSELsPVAR (Q) GAKPS(0.0)VKS(0.0)ELS(0.99)PVAR K:TMT10,s:Phosphorylated S APC 313808.5 3 32 33.1 890.71 HUMAN 1 7.8112 -14.8909 PSVPDSASPADDSFV-p P16333;S91-p PSVPDSASPADDSFV 0.279768059006979 0.146488715622609 -0.160666666666667 0.154666666666667 10.4559135573643 10.9857910359332 -0.160666666666667 0.154666666666667 0.0900344351472595 0.0796931322103633 -2.0610416727662 2.15265118736172 P16333 NCK1 P16333.S91.p_NCK1 P16333_S91s _1_1_91_91 P16333 P16333|P16333-2 Cytoplasmic protein NCK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13015.13015.3 17.03 12.46 2.102 4 1 1 0 956.4681 2787.4314 S91s TMT10 82 (K) RKPSVPDSAsPADDSFVDPGER (L) RKPS(0.0)VPDS(0.0)AS(0.99)PADDS(0.0)FVDPGER K:TMT10,s:Phosphorylated S NCK1 43091.9 2 2 2057.1 100.15 HUMAN 1 -10.4559 10.9858 PSVPKSPTPKSPPSR-p Q9NVD7;T16-p PSVPKSPTPKSPPSR 0.41023318180363 0.567866779963253 -0.111333333333333 -0.0626666666666667 7.13529220000258 3.31327705633088 -0.111333333333333 -0.0626666666666667 0.193406372746136 0.466307385915315 -1.48467523878457 -0.783238089466818 Q9NVD7 PARVA Q9NVD7.T16.p_PARVA Q9NVD7_T16tS19s_2_2_16_19 Q9NVD7 J3KNQ4|Q9NVD7|Q9NVD7-2 Alpha-parvin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9560.9983.4 9.41 9.24 1.36 6 2 2 0 624.8374 2336.3905 T16t S19s TMT10 8 (K) SPSVPKSPtPKsPPSR (K) S(0.0)PS(0.0)VPKS(0.0)PT(0.99)PKS(0.99)PPS(0.0)R K:TMT10,t:Phosphorylated T,s:Phosphorylated S PARVA 42300 10 5 2338.1 87.3 HUMAN 1 -7.1353 -3.3133 PSVRQTPSRQPPLPH-p Q07666;S35-p PSVRQTPSRQPPLPH 0.986625341798263 0.917149324873163 -0.00333333333333335 -0.0133333333333333 0.119660448344014 0.529199938826458 -0.00333333333333335 -0.0133333333333333 0.972823280659312 0.885278681639192 -0.0356714451471252 -0.15120747023355 Q07666 KHDRBS1 Q07666.S35.p_KHDRBS1 Q07666_S35s _1_1_35_35 Q07666 Q07666|Q07666-3 KH domain-containing, RNA-binding, signal transduction-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5005.5005.3 8.28 8.28 1.337 2 1 1 0 574.9718 1642.9339 S35s TMT10 32 (R) QTPsRQPPLPHR (S) QT(0.0)PS(0.99)RQPPLPHR s:Phosphorylated S KHDRBS1 48340.6 1 3 1739.1 118.29 HUMAN 1 -0.1197 -0.5292 PSVSPALSPVRSPTP-p A0A1B0GUN9;S700-p PSVSPALSPVRSPTP 0.656775474410751 0.258476133968009 -0.0776666666666667 -0.11 3.4261810983528 7.74078499383748 -0.0776666666666667 -0.11 0.454340958772246 0.168236994267746 -0.80572140310167 -1.58967217217489 A0A1B0GUN9 NotFound A0A1B0GUN9.S700.p_NotFound A0A1B0GUN9_S700s _1_1_700_700 A0A1B0GUN9 A0A1B0GUN9|B1AK53|B1AK53-2|A0A0A0MSQ4 Espin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36124.36124.4 21.23 21.23 2.382 7 1 1 0 858.7039 3351.815 S700s TMT10 673 (K) GLTTVFSGIGQPAFQPDSPLPSVSPALsPVR (S) GLT(0.0)T(0.0)VFS(0.0)GIGQPAFQPDS(0.0)PLPS(0.0)VS(0.0)PALS(0.99)PVR s:Phosphorylated S ESPN 148931.7 1 4 2152.1 95.61 HUMAN 1 -3.4262 -7.7408 PSVSQGCSREASRES-p E3W994;S529-p PSVSQGCSREASRES 0.578200159922668 0.0243142668422904 -0.109666666666667 0.525666666666667 4.37633241357555 21.9920301282141 -0.109666666666667 0.525666666666667 0.365062109176357 0.00632116296823787 -0.98841638053304 4.31554561629873 E3W994 NotFound E3W994.S529.p_NotFound E3W994_S529s _1_1_529_529 E3W994 O75122-3|E7EW49|E7ERI8|A0A0U1RQI6|J3KR49|E3W994 CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8697.8912.3 7.43 7.43 7.432 3 1 1 0 551.6102 1572.8478 S529s TMT10 519 (R) IPRPSVSQGCsR (E) IPRPS(0.0)VS(0.0)QGCS(0.99)R C:Carbamidomethylation,s:Phosphorylated S CLASP2 139660.6 1 13 158.1 498.15 HUMAN 1 -4.3763 21.992 PSVVGDQTPIEPQTS-p P49321-3;T392-p PSVVGDQTPIEPQTS 0.814137925555095 0.0093810518514061 0.0386666666666667 0.457 1.71644287386967 28.6218832587143 0.0386666666666667 0.457 0.673528089372603 0.00137344626964279 0.445048535325163 6.01458091410018 P49321 NASP P49321.3.T392.p_NASP P49321-3_T392t _1_1_392_392 P49321-3 P49321-3 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17610.17610.3 18.3 16.52 3.819 4 1 1 0 925.7858 2695.3736 T392t TMT10 379 (K) DGAVNGPSVVGDQtPIEPQTSIER (L) DGAVNGPS(0.0)VVGDQT(0.99)PIEPQT(0.0)S(0.0)IER t:Phosphorylated T NASP 86552 2 12 87.1 626.46 HUMAN 1 1.7164 28.6219 PSVVLTRSPPMELQP-p Q15633;S142-p PSVVLTRSPPMELQP 0.188778224113783 0.123666892103559 0.213666666666667 -0.195666666666667 14.1954576018261 11.9751917423259 0.213666666666667 -0.195666666666667 0.0380587254259964 0.0634571883822416 2.7288759212574 -2.32677692805086 Q15633 TARBP2 Q15633.S142.p_TARBP2 Q15633_S142s_1_1_142_142 Q15633 Q15633|Q15633-2|F8VW32 RISC-loading complex subunit TARBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36284.36284.4 16.5 14.93 3.248 3 1 1 0 957.2414 3744.9705 S142s N159n TMT10 142 (R) sPPMELQPPVSPQQSECnPVGALQELVVQK (G) S(0.99)PPMELQPPVS(0.0)PQQS(0.0)ECN(1.0)PVGALQELVVQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated TARBP2 39666.2 5 3 2078.1 98.8 HUMAN 1 14.1955 -11.9752 PSVVVAPSPKTKGQK-p P53804;S1935-p PSVVVAPSPKTKGQK 0.269095895126545 0.389525900193362 0.208 -0.098 10.8106463439514 5.44538659999582 0.208 -0.098 0.082972727317231 0.285404844096897 2.12296820661881 -1.18482968657137 P53804 TTC3 P53804.S1935.p_TTC3 P53804_S1935s _1_1_1935_1935 P53804 P53804 E3 ubiquitin-protein ligase TTC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13516.13516.3 13.51 13.51 7.884 5 1 1 0 655.6867 1885.0795 S1935s TMT10 1923 (R) SSQGSPSVVVAPsPK (T) S(0.0)S(0.0)QGS(0.0)PS(0.0)VVVAPS(0.99)PK K:TMT10,s:Phosphorylated S TTC3 233002.8 1 6 2735.1 72.28 HUMAN 1 10.8106 -5.4454 PSYARRDSPTYDPYK-p A0A0A0MQS2;S294-p PSYARRDSPTYDPYK 0.320097198520943 0.0550300913499622 -0.235333333333333 0.377666666666667 9.25971668716701 16.778608590517 -0.235333333333333 0.377666666666667 0.118584610454059 0.0209961245784866 -1.85333083107606 3.21674480616745 A0A0A0MQS2 CLASRP A0A0A0MQS2.S294.p_CLASRP A0A0A0MQS2_S294s _1_1_294_294 A0A0A0MQS2 Q8N2M8|A0A0A0MQS2|F5H0Q6|Q8N2M8-4|Q8N2M8-3 CLK4-associating serine/arginine-rich protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9040.9040.2 11.19 6.53 1.149 4 1 1 0 890.4417 1699.9056 S294s TMT10 292 (R) RDsPTYDPYK (R) RDS(0.99)PT(0.0)Y(0.0)DPY(0.0)K K:TMT10,s:Phosphorylated S CLASRP 77332.1 3 5 1177.1 169.72 HUMAN 1 -9.2597 16.7786 PSYNRDNSISPESDV-p Q5SW79;S928-p PSYNRDNSISPESDV 0.779056963761954 0.0271060514555545 -0.0586666666666667 0.403666666666667 2.08210211343195 21.2615591059525 -0.0586666666666666 0.403666666666667 0.619141319870734 0.00747900957802348 -0.526908337269655 4.15087781016557 Q5SW79 CEP170 Q5SW79.S928.p_CEP170 Q5SW79_S928sS930s_2_2_928_930 Q5SW79 Q5SW79|Q5SW79-3|Q5SW79-2 Centrosomal protein of 170 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20491.20491.5 9.79 9.79 1.389 13 2 2 0 1138.1465 5526.7563 S928s S930s TMT10 908 (K) LREDNKTDEGPDTPSYNRDNsIsPESDVDTASTISLVTGETERK (S) LREDNKT(0.0)DEGPDT(0.0)PS(0.0)Y(0.0)NRDNS(0.99)IS(0.99)PES(0.0)DVDT(0.0)AS(0.0)T(0.0)IS(0.0)LVT(0.0)GET(0.0)ERK K:TMT10,s:Phosphorylated S CEP170 175689.3 2 31 128.1 537.52 HUMAN 1 -2.0821 21.2616 PTAALNESLVECPKC-p Q53EZ4;S436-p PTAALNESLVECPKC 0.719297450903613 0.0352412799548924 0.0676666666666667 -0.317666666666667 2.70107374424704 19.5616081537395 0.0676666666666667 -0.317666666666667 0.536899037712592 0.0110621408691674 0.659014338375165 -3.78205159251949 Q53EZ4 CEP55 Q53EZ4.S436.p_CEP55 Q53EZ4_S436s _1_1_436_436 Q53EZ4 Q53EZ4 Centrosomal protein of 55 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19335.19335.2 18.07 18.07 6.181 3 1 1 0 1077.5516 2074.1255 S436s TMT10 428 (K) SPTAALNEsLVECPK (C) S(0.0)PT(0.0)AALNES(0.99)LVECPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CEP55 54519.6 2 4 2677.1 74.29 HUMAN 1 2.7011 -19.5616 PTACPGHSPRSQMAL-p Q9NZC9;S112-p PTACPGHSPRSQMAL 0.744474740122106 0.478024658162098 0.047 0.078 2.43200896842615 4.27636063093509 0.047 0.078 0.571214342031971 0.373563070912975 0.602481957743713 0.969428503746065 Q9NZC9 SMARCAL1 Q9NZC9.S112.p_SMARCAL1 Q9NZC9_S112s _1_1_112_112 Q9NZC9 Q9NZC9 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13815.13815.5 19.6 19.6 5.487 2 1 1 0 589.9093 2865.5471 S112s TMT10 96 (K) GIWKKPEEMPTACPGHsPR (S) GIWKKPEEMPT(0.0)ACPGHS(0.99)PR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SMARCAL1 106506.6 7 1 1258.1 161.3 HUMAN 1 2.432 4.2764 PTADMPKSPFKRRRS-p Q5VWQ0;S547-p PTADMPKSPFKRRRS 0.683630915493581 0.00756903109707508 -0.0726666666666667 -0.792666666666667 3.09652212471642 30.305617827082 -0.0726666666666667 -0.792666666666667 0.490171196418919 0.000932047867833363 -0.739949762112556 -6.51518432355255 Q5VWQ0 RSBN1 Q5VWQ0.S547.p_RSBN1 Q5VWQ0_S547s _1_1_547_547 Q5VWQ0 Q5VWQ0|A0A087WWP8|A0A0C4DGT8 Lysine-specific demethylase 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24715.24715.5 27.08 20.59 3.204 4 1 1 0 834.6276 4089.1327 S547s TMT10 522 (R) SQSDDGPIMWVRPGEQMIPTADMPKsPFKR (R) S(0.0)QS(0.0)DDGPIMWVRPGEQMIPT(0.0)ADMPKS(0.99)PFKR K:TMT10,s:Phosphorylated S RSBN1 90983.5 6 3 2654.1 75.05 HUMAN 1 -3.0965 -30.3056 PTAEKRESGPKQAAV-p P25054;S1465-p PTAEKRESGPKQAAV 0.0287007839003379 0.00129606731851265 -0.763 -0.958 36.0637370903943 47.2135344386022 -0.763 -0.958 0.000247529116067014 1.89953174610738e-05 -8.51134340026256 -13.905560350419 P25054 APC P25054.S1465.p_APC P25054_S1465s _1_1_1465_1465 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6100.6100.4 8.39 8.39 1.539 2 1 1 0 510.2882 1958.1638 S1465s TMT10 1457 (K) APTAEKREsGPK (Q) APT(0.0)AEKRES(0.99)GPK K:TMT10,s:Phosphorylated S APC 313808.5 1 21 33.1 890.71 HUMAN 1 -36.0637 -47.2135 PTAENPEYLGLDVPV-p P04626;Y1248-p PTAENPEYLGLDVPV 0.921287678498597 0.0126231003819755 -0.0203333333333333 0.403333333333333 0.699243169924233 26.474217339278 -0.0203333333333334 0.403333333333333 0.851286376029455 0.00225205123199303 -0.196636499062155 5.41981413685762 P04626 ERBB2 P04626.Y1248.p_ERBB2 P04626_Y1248y _1_1_1248_1248 P04626 P04626|P04626-4|P04626-5|B4DTR1|P04626-2|P04626-3 Receptor tyrosine-protein kinase erbB-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31009.31009.3 13.18 9.33 13.178 3 1 1 0 694.3407 2001.0378 Y1248y TMT10 1239 (K) GTPTAENPEyLGLDVPV (-) GT(0.0)PT(0.0)AENPEY(0.99)LGLDVPV y:Phosphorylated Y ERBB2 141274.2 1 25 521.1 283.33 HUMAN 1 -0.6992 26.4742 PTAGGFRSPSPGLFR-p Q9HAW4;S808-p PTAGGFRSPSPGLFR 0.717179227515211 0.0116327352591839 -0.0576666666666667 -0.420333333333333 2.72381975126026 27.0513944291079 -0.0576666666666667 -0.420333333333333 0.53409440058421 0.00197178953392384 -0.663736177683217 -5.57509394094622 Q9HAW4 CLSPN Q9HAW4.S808.p_CLSPN Q9HAW4_S808sS810s_2_2_808_810 Q9HAW4 Q9HAW4|Q9HAW4-3|E7ESG2|Q9HAW4-2 Claspin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29870.29870.3 9 9 1.256 5 2 2 0 825.718 2315.2134 S808s S810s TMT10 796 (R) GTSFFPTAGGFRsPsPGLFR (A) GT(0.0)S(0.0)FFPT(0.0)AGGFRS(0.99)PS(0.99)PGLFR s:Phosphorylated S CLSPN 151718.8 2 14 506.1 289.61 HUMAN 1 -2.7238 -27.0514 PTAGSAGSVPENLNL-p Q8WU79;S240-p PTAGSAGSVPENLNL 0.993618410078581 0.0484407798828752 -0.00133333333333335 0.235333333333333 0.05709923633258 17.5820732310739 -0.00133333333333336 0.235333333333333 0.986938466918145 0.0174498893281521 -0.0171409117951053 3.3754903899127 Q8WU79 SMAP2 Q8WU79.S240.p_SMAP2 Q8WU79_S240s _1_1_240_240 Q8WU79 Q8WU79|A0A087WV97|Q8WU79-2|Q8WU79-3 Stromal membrane-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22972.22996.5 23.56 23.56 3.375 6 1 1 0 954.3286 4687.6353 S240s TMT10 227 (R) KVVGSMPTAGSAGsVPENLNLFPEPGSKSEEIGKK (Q) KVVGS(0.0)MPT(0.0)AGS(0.0)AGS(0.99)VPENLNLFPEPGS(0.0)KS(0.0)EEIGKK K:TMT10,s:Phosphorylated S SMAP2 47127.5 14 3 1642.1 124.47 HUMAN 1 -0.0571 17.5821 PTANLNHSVGKGGSC-p Q96S15;S600-p PTANLNHSVGKGGSC 0.147090784109906 0.064075058176856 -0.371666666666667 0.237 16.8971376268861 15.8835082855234 -0.371666666666667 0.237 0.0204308406864413 0.0258017505064405 -3.24240252800633 3.04372316560887 Q96S15 WDR24 Q96S15.S600.p_WDR24 Q96S15_S600s _1_1_600_600 Q96S15 Q96S15|Q96S15-2 GATOR complex protein WDR24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23421.23421.4 20.46 20.46 1.8 4 1 1 0 670.3604 2598.4478 S600s TMT10 584 (R) IIYCSPGLVPTANLNHsVGK (G) IIY(0.0)CS(0.0)PGLVPT(0.0)ANLNHS(0.99)VGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WDR24 103984.5 5 2 2568.1 78.27 HUMAN 1 -16.8971 15.8835 PTASPALSDPDCLLT-p Q8WWM7-3;S1090-p PTASPALSDPDCLLT 0.971185861810661 0.809733156208253 -0.00566666666666668 0.0353333333333333 0.248497683568031 1.28434045677423 -0.00566666666666668 0.0353333333333333 0.944387503392834 0.743988040399759 -0.0730540536660386 0.343721001064377 Q8WWM7 ATXN2L Q8WWM7.3.S1090.p_ATXN2L Q8WWM7-3_S1090s _1_1_1090_1090 Q8WWM7-3 Q8WWM7-3 Isoform 3 of Ataxin-2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.37475.37475.4 22.86 22.86 1.282 8 1 1 0 1073.0171 4209.0755 S1090s TMT10 1059 (R) QGLAPGSVLCFPPSSLSCDPAAPLPTASPALsDPDCLLT (-) QGLAPGS(0.0)VLCFPPS(0.0)S(0.0)LS(0.0)CDPAAPLPT(0.0)AS(0.0)PALS(0.99)DPDCLLT(0.0) C:Carbamidomethylation,s:Phosphorylated S ATXN2L 116093.7 5 23 184.1 476.17 HUMAN 1 -0.2485 1.2843 PTATSALSLELQEVE-p Q6P2E9;S708-p PTATSALSLELQEVE 0.613802641398191 0.190053329349973 0.0736666666666667 0.189333333333333 3.9319795054251 9.48228250446693 0.0736666666666666 0.189333333333333 0.404391528847268 0.112660519508137 0.904104920213893 1.89116714170586 Q6P2E9 EDC4 Q6P2E9.S708.p_EDC4 Q6P2E9_S708s _1_1_708_708 Q6P2E9 Q6P2E9|Q6P2E9-2 Enhancer of mRNA-decapping protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32786.32786.4 17.07 17.07 1.104 6 1 1 0 860.4504 3358.8056 S708s TMT10 696 (K) GPGQVPTATSALsLELQEVEPLGLPQASPSR (T) GPGQVPT(0.0)AT(0.0)S(0.0)ALS(0.99)LELQEVEPLGLPQAS(0.0)PS(0.0)R s:Phosphorylated S EDC4 153084.9 3 10 177.1 481.34 HUMAN 1 3.932 9.4823 PTCRGALTPSIRNLA-p O43255;T119-p PTCRGALTPSIRNLA 0.757858222190709 0.0496344812444179 -0.07 -0.296333333333333 2.30491528265416 17.444855325487 -0.07 -0.296333333333333 0.588177587546495 0.0180100312942728 -0.575316792879121 -3.34813790489291 O43255 SIAH2 O43255.T119.p_SIAH2 O43255_T119t _1_1_119_119 O43255 O43255 E3 ubiquitin-protein ligase SIAH2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11621.11621.2 11.84 8.11 1.739 2 1 1 0 562.3082 1043.6411 T119t TMT10 116 (R) GALtPSIR (N) GALT(0.99)PS(0.0)IR t:Phosphorylated T SIAH2 35698.1 1 3 4921.1 25.04 HUMAN 1 -2.3049 -17.4449 PTDMRQISQDFSELS-p X6R3V9;S188-p PTDMRQISQDFSELS 0.536352617148932 0.35583019847262 0.109 -0.180666666666667 5.00379147875105 5.95279419713158 0.109 -0.180666666666667 0.315951813248697 0.253933840085251 1.10475287036464 -1.27584840454506 X6R3V9 MON1A X6R3V9.S188.p_MON1A X6R3V9_S188s _1_1_188_188 X6R3V9 X6R3V9|A0A0A0MSQ9|Q86VX9 MON1 homolog A (Yeast), isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.29752.29752.3 15.09 15.09 2.195 5 1 1 0 763.715 2209.1662 S188s TMT10 186 (R) QIsQDFSELSTQLTGVAR (D) QIS(0.99)QDFS(0.0)ELS(0.0)T(0.0)QLT(0.0)GVAR s:Phosphorylated S MON1A 73464.1 1 4 2671.1 74.31 HUMAN 1 5.0038 -5.9528 PTDNLELSLRSQSDL-p Q9Y2X7;S370-p PTDNLELSLRSQSDL 0.132729111226826 0.65510704935826 -0.281 -0.0566666666666666 18.1004571972414 2.51062473436431 -0.281 -0.0566666666666666 0.0154865357806266 0.56096727485936 -3.48262446464746 -0.619053773181161 Q9Y2X7 GIT1 Q9Y2X7.S370.p_GIT1 Q9Y2X7_S370s _1_1_370_370 Q9Y2X7 Q9Y2X7-3|A0A0C4DGN6|J3QRU8 ARF GTPase-activating protein GIT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22240.22240.3 12.81 12.81 5.363 5 1 1 0 614.3136 1760.9592 S370s TMT10 359 (K) SLSSPTDNLELsLR (S) S(0.0)LS(0.0)S(0.0)PT(0.0)DNLELS(0.99)LR s:Phosphorylated S GIT1 85081.2 1 23 474.2 301.74 HUMAN 1 -18.1005 -2.5106 PTEAMGNSNGASSSC-p Q8TD19;S801-p PTEAMGNSNGASSSC 0.358160899463675 0.42222239730982 0.140666666666667 0.0973333333333333 8.28533402757453 4.98500732146311 0.140666666666667 0.0973333333333333 0.148411172864743 0.317321331433603 1.68462568012453 1.1010879137087 Q8TD19 NEK9 Q8TD19.S801.p_NEK9 Q8TD19_S801s _1_1_801_801 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25274.25274.4 20.47 18.37 3.897 7 1 1 0 959.6717 3755.7083 S801s TMT10 780 (R) GTMEADRGMEGLISPTEAMGNsNGASSSCPGWLR (K) GT(0.0)MEADRGMEGLIS(0.0)PT(0.0)EAMGNS(0.99)NGAS(0.0)S(0.0)S(0.0)CPGWLR C:Carbamidomethylation,s:Phosphorylated S NEK9 108935.2 6 10 224.1 425.83 HUMAN 1 8.2853 4.985 PTEERRTSFSTSDVS-p Q13459;S1354-p PTEERRTSFSTSDVS 0.149247674758935 0.17940331200591 -0.421 0.148333333333333 16.6480419533264 9.81242770315493 -0.421 0.148333333333333 0.02163693820157 0.104413638453646 -3.19363145645012 1.94836910895313 Q13459 MYO9B Q13459.S1354.p_MYO9B Q13459_S1354s _1_1_1354_1354 Q13459 Q13459|M0R0P8 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13448.13448.2 11.44 11.44 1.487 6 1 1 0 798.8994 1516.8259 S1354s TMT10 1353 (R) TsFSTSDVSK (L) T(0.0)S(0.99)FS(0.0)T(0.0)S(0.0)DVS(0.0)K K:TMT10,s:Phosphorylated S MYO9B 244993.9 9 14 211.1 438.12 HUMAN 1 -16.648 9.8124 PTEKLACSLPLEGWS-p E9PIR9;S91-p PTEKLACSLPLEGWS 0.0427684239815483 0.00391753858848486 -0.567333333333333 -0.626666666666667 30.5858517642168 35.4992742109852 -0.567333333333333 -0.626666666666667 0.000873805599822745 0.000281885397623302 -6.61236958831226 -8.27984176693073 E9PIR9 NotFound E9PIR9.S91.p_NotFound E9PIR9_S91s _1_1_91_91 E9PIR9 E9PIR9 Beta/gamma crystallin domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32206.32206.3 18.29 18.29 4.662 2 1 1 0 727.3906 2100.1928 S91s TMT10 88 (K) LACsLPLEGWSPALK (T) LACS(0.99)LPLEGWS(0.0)PALK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CRYBG2 87519.3 1 2 3434.1 51.2 HUMAN 1 -30.5859 -35.4993 PTEPGPQSASEVEKI-p Q9NZT2;S403-p PTEPGPQSASEVEKI 0.0805026402883235 0.713634425868879 0.362 -0.043 23.3614306629604 2.0172371789666 0.362 -0.043 0.00461165631282571 0.628458033451719 4.64039295113243 -0.51255626298764 Q9NZT2 OGFR Q9NZT2.S403.p_OGFR Q9NZT2_S403s _1_1_403_403 Q9NZT2 Q9NZT2 Opioid growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12235.12235.3 12.39 12.39 2.73 3 1 1 0 783.3876 2268.176 S403s TMT10 393 (R) EQPPTEPGPQsASEVEK (I) EQPPT(0.0)EPGPQS(0.99)AS(0.0)EVEK K:TMT10,s:Phosphorylated S OGFR 73893.9 1 4 620.1 259.74 HUMAN 1 23.3614 -2.0172 PTESITDSPISAQDL-p Q9UDV7;S319-p PTESITDSPISAQDL 0.788666024596222 0.0387880872335287 0.051 0.367666666666667 1.98789753753608 18.9501537769767 0.051 0.367666666666667 0.632718082315877 0.0127345798903537 0.506120192300603 3.653983970195 Q9UDV7 ZNF282 Q9UDV7.S319.p_ZNF282 Q9UDV7_S319s _1_1_319_319 Q9UDV7 Q9UDV7|Q9UDV7-2 Zinc finger protein 282 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27203.27203.3 17.92 17.92 1.143 6 1 1 0 808.4117 2343.2605 S319s TMT10 310 (R) AIPTESITDsPISAQDLLSR (I) AIPT(0.0)ES(0.0)IT(0.0)DS(0.99)PIS(0.0)AQDLLS(0.0)R s:Phosphorylated S ZNF282 75378.2 3 1 5587.1 17.92 HUMAN 1 1.9879 18.9502 PTETNPVTSNSDEEC-p P46100;T674-p PTETNPVTSNSDEEC 0.904333446509495 0.487320901936871 -0.0266666666666667 -0.0846666666666667 0.857857441775419 4.17102730204537 -0.0266666666666667 -0.0846666666666667 0.820756358264755 0.382734198732891 -0.237833307215067 -0.949517759145372 P46100 ATRX P46100.T674.p_ATRX P46100_T674tS675sS677s_3_3_674_677 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9410.9618.3 13.15 13.15 5.728 6 3 3 0 959.381 2636.2307 T674t S675s S677s Hydrogen 666 (R) RPTETNPVtsNsDEECNETVK (E) RPT(0.0)ET(0.0)NPVT(0.99)S(0.99)NS(0.99)DEECNET(0.0)VK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S ATRX 285034.2 9 62 18.1 1035.36 HUMAN 1 -0.8579 -4.171 PTGAALGSPALLPPL-p Q9BRQ3;S296-p PTGAALGSPALLPPL 0.494124857697983 0.617089021051056 -0.0983333333333333 -0.0476666666666666 5.63787842141698 2.85036508242996 -0.0983333333333334 -0.0476666666666667 0.273031124557736 0.51875642869996 -1.21977513750667 -0.689758287132327 Q9BRQ3 NUDT22 Q9BRQ3.S296.p_NUDT22 Q9BRQ3_S296s _1_1_296_296 Q9BRQ3 Q9BRQ3|Q9BRQ3-3 Nucleoside diphosphate-linked moiety X motif 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34803.34803.2 12.93 12.93 6.391 3 1 1 0 1028.0601 1975.1425 S296s TMT10 285 (R) VQGSPTGAALGsPALLPPL (-) VQGS(0.0)PT(0.0)GAALGS(0.99)PALLPPL s:Phosphorylated S NUDT22 32864.6 2 1 6237.1 12.93 HUMAN 1 -5.6379 -2.8504 PTGAPTPSPAPQQYI-p P22670;S94-p PTGAPTPSPAPQQYI 0.493815034712335 0.0919196592884016 0.187333333333333 0.254 5.64256512585924 13.7106631130663 0.187333333333333 0.254 0.272736640967744 0.0425533434568305 1.22061742487221 2.63840447577091 P22670 RFX1 P22670.S94.p_RFX1 P22670_S94s _1_1_94_94 P22670 P22670 MHC class II regulatory factor RFX1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.32818.32818.4 26.08 26.08 1.729 9 1 1 0 1086.8 4264.2161 S94s TMT10 73 (K) QYVTELPAVPAPSQPTGAPTPsPAPQQYIVVTVSEGAMR (A) QY(0.0)VT(0.0)ELPAVPAPS(0.0)QPT(0.0)GAPT(0.0)PS(0.99)PAPQQY(0.0)IVVT(0.0)VS(0.0)EGAMR s:Phosphorylated S RFX1 105098.2 1 1 1675.1 121.84 HUMAN 1 5.6426 13.7107 PTGDCHISPKNVSDG-p Q9BSJ5;S231-p PTGDCHISPKNVSDG 0.64621510081216 0.143665365391014 -0.0633333333333333 -0.176 3.55066110029482 11.0997510884133 -0.0633333333333334 -0.176 0.441503234863301 0.0776291607739368 -0.830200669844941 -2.17260439617369 Q9BSJ5 C17orf80 Q9BSJ5.S231.p_C17orf80 Q9BSJ5_S231s _1_1_231_231 Q9BSJ5 Q9BSJ5|Q9BSJ5-3|Q9BSJ5-2|I3L072 Uncharacterized protein C17orf80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20672.20672.3 10.17 10.17 1.778 2 1 1 0 697.3644 2010.1094 S231s TMT10 220 (K) LLDVPTGDCHIsPK (N) LLDVPT(0.0)GDCHIS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C17orf80 68398 2 2 3866.1 41.56 HUMAN 1 -3.5507 -11.0998 PTGDFYPSPSSPAAG-p Q5VW30;S292-p PTGDFYPSPSSPAAG 0.296838039965525 0.307394448930134 0.219666666666667 0.109666666666667 9.93609929473836 6.7695298444807 0.219666666666667 0.109666666666667 0.101482246020171 0.210400620148734 1.97061082021058 1.42022769921705 Q5VW30 NFIB Q5VW30.S292.p_NFIB Q5VW30_S292s _1_1_292_292 Q5VW30 Q5VW26|Q5VW30|O00712-5|Q5VW27|A0A1B0GU97|O00712-4|A0A0A0MRX8|A0A1B0GWJ4|A0A1B0GVN4|U3KQE8|A0A1B0GW37|O00712-6|A0A1B0GWB8|Q5VW31 Nuclear factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23663.23663.3 20.61 20.61 2.61 9 1 1 0 1073.8178 3139.4727 S292s TMT10 274 (K) TISIDENMEPSPTGDFYPsPSSPAAGSR (T) T(0.0)IS(0.0)IDENMEPS(0.0)PT(0.0)GDFY(0.0)PS(0.99)PS(0.0)S(0.0)PAAGS(0.0)R s:Phosphorylated S NFIB 63015.1 2 8 655.1 253.73 HUMAN 1 9.9361 6.7695 PTGFSSPSPSAAAAA-p Q13620-1;S10-p PTGFSSPSPSAAAAA 0.734788762117455 0.539382986435544 0.053 -0.0686666666666666 2.53409860827862 3.60589228306166 0.053 -0.0686666666666667 0.557943393013096 0.435923991700789 0.624082844557075 -0.840871366821856 Q13620 CUL4B Q13620.1.S10.p_CUL4B Q13620-1_S10s _1_1_10_10 Q13620-1 Q13620-1 Isoform 2 of Cullin-4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25115.25115.3 17.01 17.01 2.126 5 1 1 0 806.7152 2338.1699 S10s TMT10 1 (-) MFPTGFSSPsPSAAAAAQEVR (S) MFPT(0.0)GFS(0.0)S(0.0)PS(0.99)PS(0.0)AAAAAQEVR s:Phosphorylated S CUL4B 102867.8 1 13 1144.2 172.94 HUMAN 1 2.5341 -3.6059 PTGHSLKSLDLVTMK-p Q92599;S166-p PTGHSLKSLDLVTMK 0.233121410286087 0.0143818691017326 -0.218 0.371333333333333 12.1533752270061 25.5416182401158 -0.218 0.371333333333333 0.0609063364593805 0.00279150349537979 -2.35956895126834 5.17562996308518 Q92599 SEPT8 Q92599.S166.p_SEPT8 Q92599_S166s _1_1_166_166 Q92599 Q92599|F8W8I8 Septin-8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24270.24270.2 12.44 12.44 6.807 2 1 1 0 722.9005 1364.8223 S166s TMT10 166 (K) sLDLVTMK (K) S(0.99)LDLVT(0.0)MK K:TMT10,s:Phosphorylated S SEPT8 56268.7 1 9 2582.1 77.62 HUMAN 1 -12.1534 25.5416 PTGRPRRSRSHSDND-p O75494;S156-p PTGRPRRSRSHSDND 0.460267810878403 0.0173615564197841 0.142 0.414 6.21355981433157 24.2706887644218 0.142 0.414 0.239135481301087 0.00374051261330984 1.32251967427011 4.85557347812937 O75494 SRSF10 O75494.S156.p_SRSF10 O75494_S156sS158s_2_2_156_158 O75494 O75494|O75494-2 Serine/arginine-rich splicing factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4150.4150.4 9.16 9.16 1.256 3 2 2 0 435.1884 1577.7982 S156s S158s Hydrogen 156 (R) sRsHSDNDRFK (H) S(0.99)RS(0.99)HS(0.0)DNDRFK K:TMT10-Lys-Only,s:Phosphorylated S SRSF10 31357 7 6 867.1 210.03 HUMAN 2 6.2136 24.2707 PTGWEEPSPESIRRK-p Q8NDV7;S991-p PTGWEEPSPESIRRK 0.90665509495526 0.2826261780559 0.018 -0.126 0.835983272284571 7.23642581924016 0.018 -0.126 0.824900701198267 0.1889545778213 0.23221494374838 -1.50190904968471 Q8NDV7 TNRC6A Q8NDV7.S991.p_TNRC6A Q8NDV7_S991s _1_1_991_991 Q8NDV7 Q8NDV7|Q8NDV7-5|Q8NDV7-6|Q8NDV7-2 Trinucleotide repeat-containing gene 6A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17178.17178.3 12.07 12.07 4.175 3 1 1 0 727.6611 2100.9923 S991s TMT10 981 (K) EEEPTGWEEPsPESIR (R) EEEPT(0.0)GWEEPS(0.99)PES(0.0)IR s:Phosphorylated S TNRC6A 211092.3 6 8 181.1 478.43 HUMAN 1 0.836 -7.2364 PTHPHRNSKEVKNIP-p O43149;S1276-p PTHPHRNSKEVKNIP 0.320014982733258 0.541089948527304 -0.234333333333333 0.0663333333333333 9.26180802323751 3.58792311247097 -0.234333333333333 0.0663333333333334 0.118527520027827 0.437731387466073 -1.85369301999677 0.837361476198778 O43149 ZZEF1 O43149.S1276.p_ZZEF1 O43149_S1276s _1_1_1276_1276 O43149 O43149 Zinc finger ZZ-type and EF-hand domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13914.13914.5 12.38 12.38 1.189 3 1 1 0 638.9197 3110.5994 S1276s TMT10 1256 (R) HQVCPELELEASWPTHPHRNsK (E) HQVCPELELEAS(0.0)WPT(0.0)HPHRNS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZZEF1 335976 1 3 1481.1 138.54 HUMAN 1 -9.2618 3.5879 PTHRRRGSFSSENYW-p Q6P6C2;S361-p PTHRRRGSFSSENYW 0.225563990023236 0.0288840362032124 -0.235 -0.339666666666667 12.4193617584676 20.8438688293521 -0.235 -0.339666666666667 0.0572880215587794 0.00823404274243847 -2.40694625993467 -4.05843613710138 Q6P6C2 ALKBH5 Q6P6C2.S361.p_ALKBH5 Q6P6C2_S361s _1_1_361_361 Q6P6C2 Q6P6C2-1|Q6P6C2-3|K7ER58 RNA demethylase ALKBH5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11582.11582.3 13.29 13.29 2.3 4 1 1 0 566.5928 1617.7971 S361s TMT10 359 (R) RGsFSSENYWR (K) RGS(0.99)FS(0.0)S(0.0)ENY(0.0)WR s:Phosphorylated S ALKBH5 44597.5 5 4 578.1 267.46 HUMAN 1 -12.4194 -20.8439 PTINIPASPFMQKLG-p Q96KB5-2;S32-p PTINIPASPFMQKLG 0.666375898623455 0.0645697468226713 -0.0763333333333333 -0.238333333333333 3.29646738200749 15.8371401696924 -0.0763333333333334 -0.238333333333333 0.468115759011367 0.0260787026796583 -0.780010940276642 -3.03486414444109 Q96KB5 PBK Q96KB5.2.S32.p_PBK Q96KB5-2_S32s _1_1_32_32 Q96KB5-2 Q96KB5-2 Isoform 2 of Lymphokine-activated killer T-cell-originated protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29915.29915.4 10.37 10.37 1.533 5 1 1 0 658.0926 2549.3872 S32s TMT10 19 (K) SVLCSTPTINIPAsPFMQK (L) S(0.0)VLCS(0.0)T(0.0)PT(0.0)INIPAS(0.99)PFMQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PBK 37553.1 1 4 2474.1 81.89 HUMAN 1 -3.2965 -15.8371 PTIRRVQSLHAPPSS-p A7KAX9;S1585-p PTIRRVQSLHAPPSS 0.864679832642579 0.146481720175667 -0.03 -0.153 1.22841407217917 10.9867756903024 -0.03 -0.153 0.753630719364863 0.0796750658293259 -0.330231495300173 -2.15282348819711 A7KAX9 ARHGAP32 A7KAX9.S1585.p_ARHGAP32 A7KAX9_S1585s _1_1_1585_1585 A7KAX9 A7KAX9|A7KAX9-2 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14821.14821.3 12.61 12.61 8.341 3 1 1 0 577.965 1651.9151 S1585s TMT10 1583 (R) VQsLHAPPSSMIR (S) VQS(0.99)LHAPPS(0.0)S(0.0)MIR s:Phosphorylated S ARHGAP32 232236.5 4 25 159.1 497.4 HUMAN 1 -1.2284 -10.9868 PTKPESQSPGKRADS-p Q5H9F3-3;S1192-p PTKPESQSPGKRADS 0.048419304614536 0.00780935263815071 -0.711333333333333 -0.637 29.1235127777598 30.0710569578613 -0.711333333333334 -0.637 0.00122362607264672 0.000983771652632885 -6.16981991943879 -6.44352670386423 Q5H9F3 BCORL1 Q5H9F3.3.S1192.p_BCORL1 Q5H9F3-3_S1192s _1_1_1192_1192 Q5H9F3-3 Q5H9F3-3|Q5H9F3-2 Isoform 3 of BCL-6 corepressor-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.4943.4943.3 12.16 8.87 2.087 3 1 1 0 684.3888 1971.1842 S1192s Hydrogen 1184 (R) KPTKPESQsPGK (R) KPT(0.0)KPES(0.0)QS(0.99)PGK K:TMT10-Lys-Only,s:Phosphorylated S BCORL1 192474.8 3 5 1277.1 159.01 HUMAN 1 -29.1235 -30.0711 PTKRLQYSQDIPSHL-p E7EVB6;S364-p PTKRLQYSQDIPSHL 0.267727693993189 0.232919094154321 0.158333333333333 0.139333333333333 10.8462851898114 8.33371121763933 0.158333333333333 0.139333333333333 0.0822946269776835 0.146767155838313 2.12920100793601 1.69244655549553 E7EVB6 DTNB E7EVB6.S364.p_DTNB E7EVB6_S364s _1_1_364_364 E7EVB6 O60941|E7EVB6|O60941-7|O60941-4|O60941-3|O60941-6 Dystrobrevin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24962.24962.4 18.93 18.93 4.589 5 1 1 0 752.3816 2926.526 S364s TMT10 361 (R) LQYsQDIPSHLADEHALIASYVAR (L) LQY(0.0)S(0.99)QDIPS(0.0)HLADEHALIAS(0.0)Y(0.0)VAR s:Phosphorylated S DTNB 71367.3 3 2 792.3 224.62 HUMAN 1 10.8463 8.3337 PTKSHTPSPTSPKSY-p P40123;S309-p PTKSHTPSPTSPKSY 0.990437594280011 0.0728417465901325 0.00199999999999999 -0.204666666666667 0.0862312614313896 15.1121866401562 0.00199999999999999 -0.204666666666667 0.980340340177207 0.0308163597896758 0.0258016604164865 -2.89761028966752 P40123 CAP2 P40123.S309.p_CAP2 P40123_S309s _1_1_309_309 P40123 A0A087WZ15|A0A087X0J3|B7Z385|P40123|E9PDI2|P40123-2 Adenylyl cyclase-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4802.4802.3 11.07 11.07 2.299 5 1 1 0 526.2767 1496.8473 S309s TMT10 305 (K) SHTPsPTSPK (S) S(0.0)HT(0.0)PS(0.99)PT(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S CAP2 53108.3 4 3 1885.1 109.06 HUMAN 1 0.0862 -15.1122 PTKSLLDTPAKRAQA-p O43151-4;T816-p PTKSLLDTPAKRAQA 0.0626849711829956 0.00188708706215948 -0.683666666666667 -1.45366666666667 26.1327960854481 42.7857769900407 -0.683666666666667 -1.45366666666667 0.00243624180613007 5.26529005916029e-05 -5.3365200028298 -11.4582189253941 O43151 NotFound O43151.4.T816.p_NotFound O43151-4_T816t _1_1_816_816 O43151-4 O43151-4|J3KNF3|O43151-2|O43151-3 Isoform 4 of Methylcytosine dioxygenase TET3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12184.12184.3 10.68 4.06 3.442 2 1 1 0 513.6279 1458.9044 T816t TMT10 812 (K) SLLDtPAKR (A) S(0.0)LLDT(0.99)PAKR K:TMT10,t:Phosphorylated T TET3 195926.1 4 7 1535.1 133.43 HUMAN 1 -26.1328 -42.7858 PTKTLRITTRKTPCG-p P60866-2;T64-p PTKTLRITTRKTPCG 0.4304053139975 0.287978357568537 0.128333333333333 -0.135333333333333 6.74221335604676 7.13391600188009 0.128333333333333 -0.135333333333333 0.211728180013251 0.193467669325769 1.41580920181226 -1.48401684983009 P60866 RPS20 P60866.2.T64.p_RPS20 P60866-2_T64t _1_1_64_64 P60866-2 P60866-2|G3XAN0 Isoform 2 of 40S ribosomal protein S20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8811.8811.3 7.13 7.13 1.166 3 1 1 0 390.5585 1089.6942 T64t TMT10 60 (K) TLRItTR (K) T(0.0)LRIT(0.99)T(0.0)R t:Phosphorylated T RPS20 16176.5 2 2 2861.1 67.94 HUMAN 1 6.7422 -7.1339 PTKTRPGSPQALGGP-p Q8WXD9;S787-p PTKTRPGSPQALGGP 0.960370968124018 0.918092993991616 0.00966666666666667 0.013 0.338374187087491 0.522674513766725 0.00966666666666669 0.013 0.925044406213996 0.886609843338277 0.0985485882022982 0.149437338541654 Q8WXD9 CASKIN1 Q8WXD9.S787.p_CASKIN1 Q8WXD9_S787s _1_1_787_787 Q8WXD9 Q8WXD9 Caskin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8525.8525.4 22.1 22.1 1.12 3 1 1 0 627.3384 2426.3668 S787s TMT10 783 (K) TRPGsPQALGGPHGPAPATAK (V) T(0.0)RPGS(0.99)PQALGGPHGPAPAT(0.0)AK K:TMT10,s:Phosphorylated S CASKIN1 150381.5 5 2 1881.1 109.29 HUMAN 1 0.3384 0.5227 PTKTSPTTPEASATN-p Q12873-3;T1600-p PTKTSPTTPEASATN 0.113112267835937 0.165843762993295 -0.917333333333333 -0.185 19.7554923387544 10.2601538749873 -0.917333333333333 -0.185 0.0105791497846792 0.094185622500002 -3.82667177766347 -2.02610305460356 Q12873 CHD3 Q12873.3.T1600.p_CHD3 Q12873-3_T1600t _1_1_1600_1600 Q12873-3 Q12873-3 Isoform 3 of Chromodomain-helicase-DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10767.10767.4 23.57 20.28 1.129 11 1 1 0 999.5054 3915.0373 T1600t TMT10 1596 (K) TSPTtPEASATNSPCTSKPATPAPSEKGEGIR (T) T(0.0)S(0.0)PT(0.0)T(0.99)PEAS(0.0)AT(0.0)NS(0.0)PCT(0.0)S(0.0)KPAT(0.0)PAPS(0.0)EKGEGIR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CHD3 234573.2 2 50 49.3 753.68 HUMAN 1 -19.7555 -10.2602 PTLAELDSSESEEET-p Q08AE8;S464-p PTLAELDSSESEEET 0.813083216141779 0.76172764838597 0.033 -0.031 1.72525658687033 1.63325584415985 0.033 -0.031 0.672162595691552 0.686553547573385 0.447060287912829 -0.425913654992112 Q08AE8 SPIRE1 Q08AE8.S464.p_SPIRE1 Q08AE8_S464sS465sS467s_3_3_464_467 Q08AE8 Q08AE8|Q08AE8-2|Q08AE8-5|Q08AE8-3|J3KNG6|Q08AE8-4 Protein spire homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22857.22857.3 13.45 13.45 3.35 5 3 3 0 928.7427 2544.3081 S464s S465s S467s TMT10 456 (R) APTLAELDssEsEEETLHK (S) APT(0.0)LAELDS(0.99)S(0.99)ES(0.99)EEET(0.0)LHK K:TMT10,s:Phosphorylated S SPIRE1 86683.2 4 8 1694.1 120.62 HUMAN 1 1.7253 -1.6333 PTLASPASD______-p P0C1Z6;S252-p PTLASPASD______ 0.940215525927245 0.618723381878048 -0.0173333333333333 0.0786666666666667 0.525317632170983 2.83392335622103 -0.0173333333333333 0.0786666666666667 0.886070416305497 0.520724083630238 -0.150168606434135 0.686380245513943 P0C1Z6 TFPT P0C1Z6.S252.p_TFPT P0C1Z6_S252s _1_1_252_252 P0C1Z6 P0C1Z6|P0C1Z6-2 TCF3 fusion partner HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33034.33237.2 16.05 16.05 4.32 4 1 1 0 827.4207 1573.8675 S252s TMT10 241 (K) LLPYPTLASPAsD (-) LLPY(0.0)PT(0.0)LAS(0.0)PAS(0.99)D s:Phosphorylated S TFPT 28334.9 2 6 969.1 193.6 HUMAN 1 -0.5253 2.8339 PTLGIARTPMKTSSG-p Q99618;T76-p PTLGIARTPMKTSSG 0.862721178211236 0.00517414996856842 -0.0256666666666667 -0.538666666666667 1.25243799928723 33.2605613536473 -0.0256666666666667 -0.538666666666667 0.749473359296369 0.000472002028012068 -0.336053834436015 -7.475281194579 Q99618 CDCA3 Q99618.T76.p_CDCA3 Q99618_T76t _1_1_76_76 Q99618 Q99618|F8WDL1|F5GX58 Cell division cycle-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18820.18820.4 18.96 13.84 2.095 7 1 1 0 801.9465 3124.8007 T76t TMT10 68 (R) SPTLGIARtPMKTSSGDPPSPLVK (Q) S(0.0)PT(0.0)LGIART(0.99)PMKT(0.0)S(0.0)S(0.0)GDPPS(0.0)PLVK K:TMT10,t:Phosphorylated T CDCA3 28997.8 12 5 831.1 215.73 HUMAN 1 -1.2524 -33.2606 PTLPKQQSFCAKPPP-p C9K0J5;S897-p PTLPKQQSFCAKPPP 0.153349579172897 0.0718046173328231 0.242 -0.216333333333333 16.3772044475004 15.2039096909068 0.242 -0.216333333333333 0.0230292373183665 0.0301723426363775 3.14095667663248 -2.91484895486914 C9K0J5 RAPH1 C9K0J5.S897.p_RAPH1 C9K0J5_S897s_1_1_897_897 C9K0J5 C9K0J5|Q70E73 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26111.26111.3 14.54 14.54 5.058 4 1 1 0 924.492 2708.521 Q895q S897s Hydrogen 895 (K) qQsFCAKPPPSPLSPVPSVVK (Q) Q(1.0)QS(0.99)FCAKPPPS(0.0)PLS(0.0)PVPS(0.0)VVK C:Carbamidomethylation,K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S RAPH1 141861.7 4 5 619.1 260.34 HUMAN 1 16.3772 -15.2039 PTLPRQNSQLPAQVQ-p A0A0U1RRM6;S129-p PTLPRQNSQLPAQVQ 0.139587060589669 0.883925105060118 0.252 -0.0263333333333333 17.5008142370719 0.753960132098726 0.252 -0.0263333333333333 0.0177794604055 0.840628261718499 3.36193483845819 -0.210949586637923 A0A0U1RRM6 NotFound A0A0U1RRM6.S129.p_NotFound A0A0U1RRM6_S129s _1_1_129_129 A0A0U1RRM6 A0A0U1RRM6|Q8N8S7|Q8N8S7-2|Q8N8S7-3 Protein enabled homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14226.14226.3 17.22 11.95 7.587 2 1 1 0 986.824 2878.4969 S129s TMT10 127 (R) QNsQLPAQVQNGPSQEELEIQRR (Q) QNS(0.99)QLPAQVQNGPS(0.0)QEELEIQRR s:Phosphorylated S ENAH 87740.8 3 1 794.2 224.28 HUMAN 1 17.5008 -0.754 PTLSRPLSPLSVPTA-p O60307;S47-p PTLSRPLSPLSVPTA 1 0.0267002800141588 -9.25185853854297e-18 -0.338 0 21.3579602635356 -8.01234452659818e-18 -0.338 1 0.00731482555800104 -9.26102595417645e-17 -4.17238798810629 O60307 MAST3 O60307.S47.p_MAST3 O60307_S47s _1_1_47_47 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27422.27422.3 18.54 18.54 1.375 11 1 1 0 1161.2905 3401.8842 S47s TMT10 32 (K) SLVVGTPSPTLSRPLsPLSVPTAGSSPLDSPR (N) S(0.0)LVVGT(0.0)PS(0.0)PT(0.0)LS(0.0)RPLS(0.99)PLS(0.0)VPT(0.0)AGS(0.0)S(0.0)PLDS(0.0)PR s:Phosphorylated S MAST3 143933.5 2 21 121.3 549.41 HUMAN 1 0 -21.358 PTLTKAPSLTDLVKS-p O15014;S1055-p PTLTKAPSLTDLVKS 0.82242509118488 0.00775433628140887 -0.0333333333333333 -0.503 1.63359676303624 30.124787536188 -0.0333333333333333 -0.503 0.68649965559749 0.000971675486334443 -0.426038574575207 -6.45988503080702 O15014 ZNF609 O15014.S1055.p_ZNF609 O15014_S1055s _1_1_1055_1055 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24177.24177.2 10.69 6.13 2.194 2 1 1 0 741.4229 1401.8717 S1055s TMT10 1053 (K) APsLTDLVK (S) APS(0.99)LT(0.0)DLVK K:TMT10,s:Phosphorylated S ZNF609 152443.5 8 26 63.1 699.07 HUMAN 1 -1.6336 -30.1248 PTLWASYSLEYGKAE-p P07741;S102-p PTLWASYSLEYGKAE 0.731722721343798 0.0883182235445611 -0.0536666666666667 0.235333333333333 2.57447121185511 13.9493365516291 -0.0536666666666667 0.235333333333333 0.552780709304121 0.0402778559944716 -0.632573242488156 2.68201946822341 P07741 APRT P07741.S102.p_APRT P07741_S102s _1_1_102_102 P07741 P07741|P07741-2 Adenine phosphoribosyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27239.27239.3 21.18 21.18 1.251 5 1 1 0 912.1699 2654.5161 S102s TMT10 90 (R) GKLPGPTLWASYsLEYGK (A) GKLPGPT(0.0)LWAS(0.0)Y(0.0)S(0.99)LEY(0.0)GK K:TMT10,s:Phosphorylated S APRT 19778.6 1 5 1901.1 108.33 HUMAN 1 -2.5745 13.9493 PTMSRSLSVPDSGRL-p O75420;S638-p PTMSRSLSVPDSGRL 0.538096091598491 0.00630838540915913 0.16 0.559666666666667 4.97689521652617 31.6795096474098 0.16 0.559666666666667 0.317914603888529 0.000679280324372907 1.09982231383795 6.94801346741149 O75420 GIGYF1 O75420.S638.p_GIGYF1 O75420_S638s _1_1_638_638 O75420 O75420 GRB10-interacting GYF protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10926.10926.2 12.08 9.09 1.976 3 1 1 0 613.8027 1146.6316 S638s TMT10 636 (R) SLsVPDSGR (L) S(0.0)LS(0.99)VPDS(0.0)GR s:Phosphorylated S GIGYF1 115112.8 1 7 1679.1 121.41 HUMAN 1 4.9769 31.6795 PTPASPASNRAVTPS-p Q99700;S736-p PTPASPASNRAVTPS 0.314226185169244 0.510407517715456 -0.151333333333333 0.072 9.40701129582885 3.91603402386146 -0.151333333333333 0.072 0.114630152562889 0.405879014878145 -1.8788449865153 0.900894793543524 Q99700 ATXN2 Q99700.S736.p_ATXN2 Q99700_S736s_1_1_736_736 Q99700 Q99700|Q99700-4|V9GY86 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31316.31316.3 17.16 17.36 1.371 9 1 1 0 1521.1083 4464.3394 M722m S736s N737n TMT10 695 (R) QNSIGNTPSGPVLASPQAGIIPTEAVAmPIPAASPTPASPAsnR (A) QN(0.0)S(0.0)IGN(0.0)T(0.0)PS(0.0)GPVLAS(0.0)PQAGIIPT(0.0)EAVAM(1.0)PIPAAS(0.0)PT(0.0)PAS(0.0)PAS(0.99)N(0.99)R m:Oxidized methionine,s:Phosphorylated S,n:Deamidated ATXN2 140907.9 2 15 176.1 481.52 HUMAN 1 -9.407 3.916 PTPAVLLSPTKEPPP-p Q8WX93;S641-p PTPAVLLSPTKEPPP 0.0516084415931898 0.0112726301965437 -0.518333333333333 -0.442666666666667 28.1558917669781 27.2773754171006 -0.518333333333333 -0.442666666666667 0.00152901175159584 0.0018718129961384 -5.89008871733007 -5.63678263471016 Q8WX93 PALLD Q8WX93.S641.p_PALLD Q8WX93_S641s _1_1_641_641 Q8WX93 Q8WX93|Q8WX93-5|Q8WX93-9|Q8WX93-2|Q8WX93-3|Q8WX93-8 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29405.29405.5 22.89 22.89 2.623 4 1 1 0 679.0168 3311.0888 S641s TMT10 632 (K) SLPTPAVLLsPTKEPPPLLAKPK (L) S(0.0)LPT(0.0)PAVLLS(0.99)PT(0.0)KEPPPLLAKPK K:TMT10,s:Phosphorylated S PALLD 151930.4 6 2 338.1 354.43 HUMAN 1 -28.1559 -27.2774 PTPGPAASPEQLSFR-p A0A0G2JPP5;S1348-p PTPGPAASPEQLSFR 0.559375135106673 0.239218235802247 0.109666666666667 -0.127 4.65680800536018 8.18386880594092 0.109666666666667 -0.127 0.342230884298993 0.151919359038757 1.04077349327399 -1.66650165532983 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1348.p_SCRIB A0A0G2JPP5_S1348s _1_1_1348_1348 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21788.21788.4 25.05 25.05 2.068 5 1 1 0 912.6989 3567.807 S1348s TMT10 1323 (R) AFAAVPTSHPPEDAPAQPPTPGPAAsPEQLSFR (E) AFAAVPT(0.0)S(0.0)HPPEDAPAQPPT(0.0)PGPAAS(0.99)PEQLS(0.0)FR s:Phosphorylated S SCRIB 178690.9 3 31 22.1 1004.81 HUMAN 1 4.6568 -8.1839 PTPGSPGSPPSGFLL-p Q9BZE0;S54-p PTPGSPGSPPSGFLL 0.161991144248337 0.652864053683323 -0.327 -0.0433333333333333 15.8257886259624 2.52889829832367 -0.327 -0.0433333333333333 0.0261469560810294 0.558611883296397 -3.03481088113737 -0.622907218915038 Q9BZE0 GLIS2 Q9BZE0.S54.p_GLIS2 Q9BZE0_S54s _1_1_54_54 Q9BZE0 Q9BZE0 Zinc finger protein GLIS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30288.30288.4 21.75 21.75 1.102 6 1 1 0 960.0024 3757.0303 S54s TMT10 39 (R) ELGLVDDSPTPGSPGsPPSGFLLNSKFPEK (V) ELGLVDDS(0.0)PT(0.0)PGS(0.0)PGS(0.99)PPS(0.0)GFLLNS(0.0)KFPEK K:TMT10,s:Phosphorylated S GLIS2 56486.5 5 2 1864.1 110.54 HUMAN 1 -15.8258 -2.5289 PTPIPTRSPSDSSTA-p Q16643-3;S383-p PTPIPTRSPSDSSTA 0.834327857608735 0.109333006519697 0.031 -0.180666666666667 1.51752734204152 12.6990130886328 0.031 -0.180666666666667 0.705094400581689 0.0537153847888566 0.399090219386056 -2.45565931530154 Q16643 DBN1 Q16643.3.S383.p_DBN1 Q16643-3_S383s _1_1_383_383 Q16643-3 Q16643|D6R9Q9|Q16643-3|Q16643-2 Isoform 3 of Drebrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17336.17747.3 18.38 18.38 1.24 9 1 1 0 1045.8464 3055.5567 S383s TMT10 374 (R) MAPTPIPTRsPSDSSTASTPVAEQIER (A) MAPT(0.0)PIPT(0.0)RS(0.99)PS(0.0)DS(0.0)S(0.0)T(0.0)AS(0.0)T(0.0)PVAEQIER s:Phosphorylated S DBN1 76925.9 12 4 1729.1 119.21 HUMAN 1 1.5175 -12.699 PTPLHPPTPPILSTD-p Q03164-3;T1848-p PTPLHPPTPPILSTD 0.181336554886184 0.0244219082797508 -0.256333333333333 -0.473 14.6115469752982 21.9563600187827 -0.256333333333333 -0.473 0.0345816174701807 0.00637329466300237 -2.80590900428375 -4.30741377841366 Q03164 KMT2A Q03164.3.T1848.p_KMT2A Q03164-3_T1848t _1_1_1848_1848 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21641.21641.3 14.57 14.57 4.188 5 1 1 0 896.4504 2607.3616 T1848t TMT10 1834 (K) GPGEPDSPTPLHPPtPPILSTDR (S) GPGEPDS(0.0)PT(0.0)PLHPPT(0.99)PPILS(0.0)T(0.0)DR t:Phosphorylated T KMT2A 436608.3 2 23 26.1 936.8 HUMAN 1 -14.6115 -21.9564 PTPPAPPSPDWTSSS-p Q8IV56;S49-p PTPPAPPSPDWTSSS 0.48412171880199 0.340193489020654 0.110666666666667 0.0943333333333333 5.80324686422383 6.20301440240347 0.110666666666667 0.0943333333333334 0.262830229078294 0.239716848645291 1.24943320199649 1.32032531233862 Q8IV56 PRR15 Q8IV56.S49.p_PRR15 Q8IV56_S49s _1_1_49_49 Q8IV56 Q8IV56 Proline-rich protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19596.19596.5 21.75 17.17 3.618 7 1 1 0 780.9956 3820.991 S49s TMT10 24 (K) SKEAAVGVPPPAQPAPGEPTPPAPPsPDWTSSSR (E) S(0.0)KEAAVGVPPPAQPAPGEPT(0.0)PPAPPS(0.99)PDWT(0.0)S(0.0)S(0.0)S(0.0)R K:TMT10,s:Phosphorylated S PRR15 13714.9 6 1 3413.1 51.69 HUMAN 1 5.8032 6.203 PTPPKDVSPDPSLST-p P23771-2;S162-p PTPPKDVSPDPSLST 0.117612251860766 0.025487785766934 -0.519333333333333 0.336 19.3341887693978 21.6863095739292 -0.519333333333333 0.336 0.011656847719654 0.00678217579565424 -3.73749464396841 4.24615472964578 P23771 GATA3 P23771.2.S162.p_GATA3 P23771-2_S162s _1_1_162_162 P23771-2 P23771-2 Isoform 2 of Trans-acting T-cell-specific transcription factor GATA-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12692.12692.2 15.64 12.97 3.082 6 1 1 0 1005.4725 1929.9715 S162s TMT10 160 (K) DVsPDPSLSTPGSAGSAR (Q) DVS(0.99)PDPS(0.0)LS(0.0)T(0.0)PGS(0.0)AGS(0.0)AR s:Phosphorylated S GATA3 48728.8 2 2 2536.1 79.45 HUMAN 1 -19.3342 21.6863 PTPPTRKTPESFLGP-p Q9Y6I3-1;T556-p PTPPTRKTPESFLGP 0.393895312924686 0.00724033137494857 0.125333333333333 0.525 7.46606661135305 30.6218837229524 0.125333333333333 0.525 0.179222833359023 0.000866585918446547 1.54237398678869 6.61281838581051 Q9Y6I3 EPN1 Q9Y6I3.1.T556.p_EPN1 Q9Y6I3-1_T556t _1_1_556_556 Q9Y6I3-1 Q9Y6I3-1|Q9Y6I3-3 Isoform 2 of Epsin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.35329.35329.4 28.43 28.43 2.35 5 1 1 0 886.225 3461.9044 T556t TMT10 556 (K) tPESFLGPNAALVDLDSLVSRPGPTPPGAK (A) T(0.99)PES(0.0)FLGPNAALVDLDS(0.0)LVS(0.0)RPGPT(0.0)PPGAK K:TMT10,t:Phosphorylated T EPN1 69266.5 6 6 856.1 210.87 HUMAN 1 7.4661 30.6219 PTPQKAGSSDSCFSG-p Q9H6A9;S297-p PTPQKAGSSDSCFSG 0.443470607538588 0.144894526954526 0.109333333333333 0.262333333333333 6.50852662201697 11.0496795942637 0.109333333333333 0.262333333333333 0.223433010822122 0.0785293568406893 1.37467829326643 2.16383445148852 Q9H6A9 PCNXL3 Q9H6A9.S297.p_PCNXL3 Q9H6A9_S297s _1_1_297_297 Q9H6A9 Q9H6A9|Q9H6A9-2 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16778.16778.3 14.66 14.66 1.113 8 1 1 0 893.0799 2597.2554 S297s TMT10 295 (K) AGsSDSCFSGTDRETLSSFK (S) AGS(0.99)S(0.0)DS(0.0)CFS(0.0)GT(0.0)DRET(0.0)LS(0.0)S(0.0)FK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCNX3 224430.8 3 11 168.1 492.45 HUMAN 1 6.5085 11.0497 PTPRKPESPYGNLCD-p Q9UKA4;S422-p PTPRKPESPYGNLCD 0.0747667038236667 0.0118414306746564 -0.368666666666667 -0.462666666666667 24.1191232919652 26.926451783741 -0.368666666666667 -0.462666666666667 0.00387335828314185 0.00202934002739336 -4.82408195519027 -5.54120412147261 Q9UKA4 AKAP11 Q9UKA4.S422.p_AKAP11 Q9UKA4_S422s _1_1_422_422 Q9UKA4 Q9UKA4 A-kinase anchor protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13790.13790.5 18.26 18.8 1.877 3 1 1 0 599.7123 2914.57 S422s TMT10 419 (R) KPEsPYGNLCDAPDSPRPVK (A) KPES(0.99)PY(0.0)GNLCDAPDS(0.0)PRPVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S AKAP11 213075.9 4 4 688.1 243.29 HUMAN 1 -24.1191 -26.9265 PTPRVTVSKDRQSFG-p Q9H156;S318-p PTPRVTVSKDRQSFG 0.547622121984462 NA -0.3815 0.147 4.82801894079241 NA -0.3815 NA 0.329001672653614 NA -1.09669644135998 NA Q9H156 SLITRK2 Q9H156.S318.p_SLITRK2 Q9H156_T316tS318sS323s_3_3_316_323 Q9H156 Q9H156|Q9H156-2 SLIT and NTRK-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5774.5774.4 10.68 3.31 7.413 6 3 3 0 1035.0105 3880.1769 N309n T316t S318s S323s M328m TMT10 307 (K) MRnRPTPRVtVsKDRQsFGPImVYQTK (S) M(0.0)RN(1.0)RPT(0.0)PRVT(0.99)VS(0.99)KDRQS(0.99)FGPIM(0.99)VY(0.0)QT(0.0)K K:TMT10,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S,m:Oxidized methionine SLITRK2 96543.7 1 1 6600.1 10.68 HUMAN 1 -4.828 NA PTPSMMPSPNSHAAG-p Q9UGU0;S427-p PTPSMMPSPNSHAAG 0.277275932820916 0.304984770187775 0.174333333333333 0.139 10.5391059105609 6.8111084172658 0.174333333333333 0.139 0.0883261720295295 0.208395894199221 2.07554737011111 1.42752274398747 Q9UGU0 TCF20 Q9UGU0.S427.p_TCF20 Q9UGU0_S427s_1_1_427_427 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33855.33855.5 21.47 21.47 2.226 5 1 1 0 664.7402 3238.7191 S427s N429n TMT10 411 (R) ILQLMPQLSPTPSMMPsPnSHAAGFK (G) ILQLMPQLS(0.0)PT(0.0)PS(0.0)MMPS(0.99)PN(1.0)S(0.0)HAAGFK K:TMT10,s:Phosphorylated S,n:Deamidated TCF20 213250.7 3 3 197.1 457.96 HUMAN 1 10.5391 6.8111 PTPSTVSTPSPSADL-p O95782;T653-p PTPSTVSTPSPSADL 0.825130077485234 0.031981866699533 0.0386666666666666 0.270166666666667 1.60922920126452 20.1886145512814 0.0386666666666667 0.270166666666667 0.690362320521112 0.00957499475785262 0.420412065089209 3.91583810844409 O95782 AP2A1 O95782.T653.p_AP2A1 O95782_T653tS655s_2_2_653_655 O95782 O95782|O95782-2 AP-2 complex subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21732.21732.5 22.89 22.89 1.213 10 2 2 0 1014.6826 4908.4798 N641n T653t S655s TMT10 620 (K) KGPGAGSALDDGRRDPSSNDInGGMEPTPSTVStPsPSADLLGLR (A) KGPGAGS(0.0)ALDDGRRDPS(0.0)S(0.0)N(0.0)DIN(0.99)GGMEPT(0.0)PS(0.0)T(0.0)VS(0.0)T(0.99)PS(0.99)PS(0.0)ADLLGLR K:TMT10,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S AP2A1 108628 4 4 1590.1 129.37 HUMAN 2 1.6092 20.1886 PTQALPASPALKNKR-p Q15554;S365-p PTQALPASPALKNKR 0.691310392703045 0.00272422972588299 -0.055 -0.859 3.00683470578052 38.9232617864486 -0.055 -0.859 0.500399110953442 0.000128136784461262 -0.721800162660518 -9.65744961394868 Q15554 TERF2 Q15554.S365.p_TERF2 Q15554_S365s _1_1_365_365 Q15554 Q15554 Telomeric repeat-binding factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29512.29716.3 20.58 20.58 7.825 2 1 1 0 724.7529 2092.2782 S365s TMT10 354 (K) DLVLPTQALPAsPALK (N) DLVLPT(0.0)QALPAS(0.99)PALK K:TMT10,s:Phosphorylated S TERF2 59763.6 5 1 2594.1 77.28 HUMAN 1 -3.0068 -38.9233 PTQQYAKSLPVSVPV-p Q96B36-3;S203-p PTQQYAKSLPVSVPV 0.0217780195589434 0.00457608170970566 -0.822666666666667 -1.24133333333333 38.5730336847344 34.2480576929659 -0.822666666666667 -1.24133333333333 0.000138898204423709 0.000376005528666453 -9.52868781090979 -7.82145907373408 Q96B36 AKT1S1 Q96B36.3.S203.p_AKT1S1 Q96B36-3_S203s _1_1_203_203 Q96B36-3 Q96B36-3|Q96B36-2 Isoform 3 of Proline-rich AKT1 substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.34054.34411.3 18.4 18.4 4.043 2 1 1 0 618.6822 1774.0667 S203s TMT10 203 (K) sLPVSVPVWGFK (E) S(0.99)LPVS(0.0)VPVWGFK K:TMT10,s:Phosphorylated S AKT1S1 29490.1 13 3 1393.1 146.92 HUMAN 1 -38.573 -34.2481 PTQRDAGSRDEKAEA-p O95671;S255-p PTQRDAGSRDEKAEA 0.398667761739948 0.0610999358357444 0.156666666666667 0.348666666666667 7.37091725289488 16.167459852394 0.156666666666667 0.348666666666667 0.183192746874761 0.0241687402802598 1.52579674402132 3.09819307420553 O95671 ASMTL O95671.S255.p_ASMTL O95671_S255s _1_1_255_255 O95671 O95671|O95671-2|O95671-3 N-acetylserotonin O-methyltransferase-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6309.6309.4 10.75 10.75 4.326 2 1 1 0 732.0726 2845.2968 S255s Hydrogen 252 (R) DAGsRDEKAEAGEAGQATAEAECHR (T) DAGS(0.99)RDEKAEAGEAGQAT(0.0)AEAECHR K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S ASMTL 69597.2 1 3 2260.1 90.98 HUMAN 1 7.3709 16.1675 PTRDLQSSPPSLPLG-p Q9UN79;S335-p PTRDLQSSPPSLPLG 0.838274783466982 0.855301098424014 -0.045 0.0363333333333333 1.48199333512435 0.957012930878522 -0.045 0.0363333333333334 0.710887154088594 0.802229645689809 -0.390763766605362 0.263034781278735 Q9UN79 SOX13 Q9UN79.S335.p_SOX13 Q9UN79_S335s _1_1_335_335 Q9UN79 Q9UN79 Transcription factor SOX-13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.33613.33613.2 19.44 19.44 1.105 4 1 1 0 1383.7244 2686.4704 S335s TMT10 331 (R) DLQSsPPSLPLGFLGEGDAVTK (A) DLQS(0.0)S(0.99)PPS(0.0)LPLGFLGEGDAVT(0.0)K K:TMT10,s:Phosphorylated S SOX13 69740.6 7 7 1036.1 185.73 HUMAN 1 -1.482 0.957 PTREGALTPPPFPSS-p Q8N1G0;T191-p PTREGALTPPPFPSS 0.80012376994327 0.0243936061397655 0.0396666666666667 0.392 1.86720600184116 21.9646929947 0.0396666666666667 0.392 0.650548080551027 0.00636107770076868 0.479188808591795 4.30931262847357 Q8N1G0 ZNF687 Q8N1G0.T191.p_ZNF687 Q8N1G0_T191t_1_1_191_191 Q8N1G0 Q8N1G0|Q8N1G0-2|F8WCX2 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.35829.35829.4 19.55 18.44 1.11 5 1 1 0 1046.7908 4103.1564 T191t N205n TMT10 187 (R) EGALtPPPFPSSFELAQEnGPGMQPPVSSPPLGALK (Q) EGALT(0.99)PPPFPS(0.0)S(0.0)FELAQEN(1.0)GPGMQPPVS(0.0)S(0.0)PPLGALK K:TMT10,t:Phosphorylated T,n:Deamidated ZNF687 131979.7 7 3 156.1 501.88 HUMAN 1 1.8672 21.9647 PTRERSPSPSFRWPF-p P49585;S331-p PTRERSPSPSFRWPF 0.437983998739541 0.263146602893666 -0.181 0.343666666666667 6.60222813396761 7.6386442908795 -0.181 0.343666666666667 0.218663948771513 0.172240616351558 -1.39118946293062 1.57193007393274 P49585 PCYT1A P49585.S331.p_PCYT1A P49585_S331s _1_1_331_331 P49585 C9JEJ2|P49585 Choline-phosphate cytidylyltransferase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23808.23808.4 8.16 8.16 1.24 4 1 1 0 505.2623 1938.0638 S331s TMT10 329 (R) SPsPSFRWPFSGK (T) S(0.0)PS(0.99)PS(0.0)FRWPFS(0.0)GK K:TMT10,s:Phosphorylated S PCYT1A 42072.6 1 8 694.1 242.25 HUMAN 1 -6.6022 7.6386 PTRKITESPRASMGV-p Q12888-2;S1661-p PTRKITESPRASMGV 0.554443032289958 0.420892121675757 0.0783333333333333 -0.127333333333333 4.72996776050332 5.00256151661362 0.0783333333333333 -0.127333333333333 0.336514067450954 0.316041306396258 1.05433257670398 -1.10430420638734 Q12888 TP53BP1 Q12888.2.S1661.p_TP53BP1 Q12888-2_S1661s _1_1_1661_1661 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18652.18652.3 15.43 11.49 2.63 4 1 1 0 691.0401 1991.136 S1661s TMT10 1658 (K) ITEsPRASMGVLSGK (R) IT(0.0)ES(0.99)PRAS(0.0)MGVLS(0.0)GK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 20 71 3.1 2297.07 HUMAN 1 4.73 -5.0026 PTRMLFVTPRRQHES-p Q9P2N6;T63-p PTRMLFVTPRRQHES 0.982487582037312 0.89457211773714 0.00566666666666666 -0.023 0.153484642199751 0.679026269929125 0.00566666666666665 -0.023 0.965276061063706 0.855258448573612 0.0455849737932301 -0.191288965073843 Q9P2N6 KANSL3 Q9P2N6.T63.p_KANSL3 Q9P2N6_T63t _1_1_63_63 Q9P2N6 Q9P2N6|Q9P2N6-3|Q9P2N6-2 KAT8 regulatory NSL complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21817.21817.2 10.08 6.72 99 1 1 1 0 586.8099 1092.6437 T63t TMT10 59 (R) MLFVtPR (R) MLFVT(1.0)PR t:Phosphorylated T KANSL3 96617.6 1 1 1437.1 142.47 HUMAN 1 0.1535 -0.679 PTRRPGFSPTSHRLL-p Q8WUA4;S901-p PTRRPGFSPTSHRLL 0.331647864397022 0.209559509615694 -0.274666666666667 0.181333333333333 8.95375855329283 8.92850213999226 -0.274666666666667 0.181333333333333 0.127240141871813 0.127982263249004 -1.80035811055675 1.79534593171487 Q8WUA4 GTF3C2 Q8WUA4.S901.p_GTF3C2 Q8WUA4_S901s _1_1_901_901 Q8WUA4 Q8WUA4 General transcription factor 3C polypeptide 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4197.4197.3 9.41 9.41 1.381 3 1 1 0 484.2434 1370.749 S901s TMT10 897 (R) RPGFsPTSHR (L) RPGFS(0.99)PT(0.0)S(0.0)HR s:Phosphorylated S GTF3C2 101761.7 3 11 753.1 231.45 HUMAN 1 -8.9538 8.9285 PTRRRLLSWSDNWRE-p Q8TCD5;S182-p PTRRRLLSWSDNWRE 0.263920652188996 0.738674172584289 -0.185 0.05 10.9750806110089 1.81475678883625 -0.185 0.05 0.0798899112867167 0.658452303188052 -2.15174424051973 0.467323791171867 Q8TCD5 NT5C Q8TCD5.S182.p_NT5C Q8TCD5_S182s _1_1_182_182 Q8TCD5 Q8TCD5|J3KSY6 5'(3')-deoxyribonucleotidase, cytosolic type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34818.34818.3 19.52 13.11 1.153 3 1 1 0 800.751 2320.2702 S182s TMT10 180 (R) LLsWSDNWREILDSK (R) LLS(0.99)WS(0.0)DNWREILDS(0.0)K K:TMT10,s:Phosphorylated S NT5C 23610.6 15 2 2129.1 96.57 HUMAN 1 -10.9751 1.8148 PTRVGFGSGQPPPYD-p Q92574;S598-p PTRVGFGSGQPPPYD 0.866676444161736 0.00275124721332162 -0.03 -0.711 1.21023948962099 38.7824824765698 -0.03 -0.711 0.756791160982607 0.00013235847428523 -0.325814024214319 -9.59699836420585 Q92574 TSC1 Q92574.S598.p_TSC1 Q92574_S598s _1_1_598_598 Q92574 Q92574|Q92574-2 Hamartin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.31524.31524.4 20.06 14.62 10.9 2 1 1 0 699.1161 2713.4754 S598s TMT10 594 (R) VGFGsGQPPPYDHLFEVALPK (T) VGFGS(0.99)GQPPPY(0.0)DHLFEVALPK K:TMT10,s:Phosphorylated S TSC1 130734.2 2 9 418.1 320.74 HUMAN 1 -1.2102 -38.7825 PTSAGPNSFNKGKHG-p Q8WW12;S147-p PTSAGPNSFNKGKHG 0.505122168097162 0.478631679368919 0.100333333333333 -0.0856666666666667 5.47800258315084 4.26830590959273 0.100333333333333 -0.0856666666666667 0.283269451541505 0.374256549322178 1.19097823632436 -0.967909383079277 Q8WW12 PCNP Q8WW12.S147.p_PCNP Q8WW12_S147s _1_1_147_147 Q8WW12 Q8WW12|Q8WW12-3 PEST proteolytic signal-containing nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11425.11425.3 16.14 16.14 5.81 4 1 1 0 625.3078 1793.9434 S147s TMT10 138 (R) DTPTSAGPNsFNK (G) DT(0.0)PT(0.0)S(0.0)AGPNS(0.99)FNK K:TMT10,s:Phosphorylated S PCNP 18924.5 2 8 1455.1 140.6 HUMAN 1 5.478 -4.2683 PTSATKTSPLNSSGS-p P51003;S545-p PTSATKTSPLNSSGS 0.534705148071304 0.408485608596351 0.088 0.127666666666667 5.03268633953738 5.17507722554165 0.088 0.127666666666667 0.313856672492188 0.303733208211857 1.11004470189928 1.13581082349045 P51003 PAPOLA P51003.S545.p_PAPOLA P51003_S545s _1_1_545_545 P51003 P51003|G3XAH6 Poly(A) polymerase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5593.5593.2 9.8 2.98 1.394 6 1 1 0 793.8732 1506.771 S545s TMT10 544 (K) TsPLNSSGSSQGR (N) T(0.0)S(0.99)PLNS(0.0)S(0.0)GS(0.0)S(0.0)QGR s:Phosphorylated S PAPOLA 83297.5 1 5 1658.1 123.25 HUMAN 1 5.0327 5.1751 PTSGRQRSLEQLDEL-p C9J069;S576-p PTSGRQRSLEQLDEL 0.801789763948685 0.0720384418561393 0.0493333333333333 0.213333333333333 1.84788740084342 15.1815367529507 0.0493333333333334 0.215358392731538 0.653448341328886 0.030328178303675 0.474845741519323 2.91064081821532 C9J069 C9orf172 C9J069.S576.p_C9orf172 C9J069_S576s _1_1_576_576 C9J069 C9J069 Uncharacterized protein C9orf172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.37148.37148.4 36.26 33.37 16.955 5 1 1 0 1047.772 4108.107 S576s TMT10 576 (R) sLEQLDELITDLVIDSRPTAGQASEPAADCLGPQLR (R) S(0.99)LEQLDELIT(0.0)DLVIDS(0.0)RPT(0.0)AGQAS(0.0)EPAADCLGPQLR C:Carbamidomethylation,s:Phosphorylated S C9orf172 107960.6 7 13 430.1 316.49 HUMAN 1 1.8479 15.1815 PTSIKCLTPHLKDGV-p A0A087X211;T586-p PTSIKCLTPHLKDGV 0.572891517927251 0.0197428993849185 0.102333333333333 -0.371 4.45152167322963 23.3907989345072 0.102333333333333 -0.371 0.358796198249128 0.00458057614011904 1.00251283281317 -4.64211067228677 A0A087X211 NotFound A0A087X211.T586.p_NotFound A0A087X211_T586t _1_1_586_586 A0A087X211 A0A087X211|Q8TCG1|Q8TCG1-2 Cell proliferation-regulating inhibitor of protein phosphatase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30855.30855.4 16.38 11.14 99 1 1 1 0 786.4335 3062.7527 T586t TMT10 584 (K) CLtPHLKDGVPGLNIEELIEK (L) CLT(1.0)PHLKDGVPGLNIEELIEK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CIP2A 103478.4 3 2 3778.1 43.31 HUMAN 1 4.4515 -23.3908 PTSPFMGSLRALHLV-p Q86W92-2;S45-p PTSPFMGSLRALHLV 0.391630012811447 0.0937770417870454 0.118333333333333 0.291333333333333 7.50606997590736 13.5953749048255 0.118333333333333 0.291333333333333 0.177579570972301 0.043698095504996 1.54933910681539 2.6174087025847 Q86W92 PPFIBP1 Q86W92.2.S45.p_PPFIBP1 Q86W92-2_S45s _1_1_45_45 Q86W92-2 Q86W92|Q86W92-2|Q86W92-4|A0A0A0MTP2|Q86W92-5 Isoform 2 of Liprin-beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30464.30464.3 17.86 17.86 1.124 6 1 1 0 962.7728 2806.3378 S45s TMT10 25 (K) ALEYSNGIFDCQSPTSPFMGsLR (A) ALEY(0.0)S(0.0)NGIFDCQS(0.0)PT(0.0)S(0.0)PFMGS(0.99)LR C:Carbamidomethylation,s:Phosphorylated S PPFIBP1 113749.6 1 5 449.1 309.07 HUMAN 1 7.5061 13.5954 PTSPKQGSLPDIQGP-p Q9H7P9;S1168-p PTSPKQGSLPDIQGP 0.212494308183896 0.216119016491305 0.191666666666667 0.125 12.982973041098 8.75575638533922 0.191666666666667 0.125 0.0503156046329127 0.133175507810843 2.50799920816854 1.76546771684208 Q9H7P9 PLEKHG2 Q9H7P9.S1168.p_PLEKHG2 Q9H7P9_S1168s _1_1_1168_1168 Q9H7P9 Q9H7P9|Q9H7P9-3|E7ESZ3 Pleckstrin homology domain-containing family G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27056.27056.4 17.35 17.35 10.874 4 1 1 0 849.1999 3313.8044 S1168s TMT10 1166 (K) QGsLPDIQGPAAAPPLPEPSLTDTQVQK (L) QGS(0.99)LPDIQGPAAAPPLPEPS(0.0)LT(0.0)DT(0.0)QVQK K:TMT10,s:Phosphorylated S PLEKHG2 149335.7 1 11 886.1 206.23 HUMAN 1 12.983 8.7558 PTSPRRYSPVAKDLL-p P78352-2;S338-p PTSPRRYSPVAKDLL 0.702158357646734 0.56139328956448 -0.066 0.059 2.88743485901248 3.37951242622862 -0.066 0.059 0.514347358855405 0.459249568977859 -0.697454821483392 0.796375391685155 P78352 DLG4 P78352.2.S338.p_DLG4 P78352-2_S338s _1_1_338_338 P78352-2 P78352-2|P78352-3 Isoform 2 of Disks large homolog 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7181.7181.3 7.36 5.45 5.838 2 1 1 0 453.5925 1278.7934 S338s TMT10 336 (R) RYsPVAK (D) RY(0.0)S(0.99)PVAK K:TMT10,s:Phosphorylated S DLG4 85656.6 3 2 196.5 460.79 HUMAN 1 -2.8874 3.3795 PTSQGIPTSDEESTP-p Q9NQS7;T213-p PTSQGIPTSDEESTP 0.756709311612952 0.0072868134525058 0.0446666666666667 -0.468 2.31834514842759 30.5730020323293 0.0446666666666667 -0.468 0.586361551300615 0.000876394809511081 0.578202119669538 -6.59765134322188 Q9NQS7 INCENP Q9NQS7.T213.p_INCENP Q9NQS7_T213tS214s_2_2_213_214 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17325.17325.4 17.75 17.75 1.125 11 2 2 0 912.4588 3486.8782 T213t S214s TMT10 195 (R) TLSPTPASATAPTSQGIPtsDEESTPKK (S) T(0.0)LS(0.0)PT(0.0)PAS(0.0)AT(0.0)APT(0.0)S(0.0)QGIPT(0.99)S(0.99)DEES(0.0)T(0.0)PKK K:TMT10,t:Phosphorylated T,s:Phosphorylated S INCENP 105826.3 16 26 138.1 524.38 HUMAN 1 2.3183 -30.573 PTSSLQPSPETLISD-p Q9ULJ8-3;S1153-p PTSSLQPSPETLISD 0.392704789566549 0.291589442002023 -0.117333333333333 0.108666666666667 7.48620406906306 7.06475697195684 -0.117333333333333 0.108666666666667 0.178393732843626 0.196573197843887 -1.54588050237078 1.47193344543128 Q9ULJ8 PPP1R9A Q9ULJ8.3.S1153.p_PPP1R9A Q9ULJ8-3_S1153s _1_1_1153_1153 Q9ULJ8-3 Q9ULJ8-3|Q9ULJ8-5|Q9ULJ8-4|Q9ULJ8-2 Isoform 3 of Neurabin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26316.26316.3 12.26 12.26 3.779 6 1 1 0 878.4649 2553.4176 S1153s TMT10 1142 (R) NLPAPTSSLQPsPETLISDK (K) NLPAPT(0.0)S(0.0)S(0.0)LQPS(0.99)PET(0.0)LIS(0.0)DK K:TMT10,s:Phosphorylated S PPP1R9A 154561.1 1 5 1935.1 106.21 HUMAN 1 -7.4862 7.0648 PTSSNTPTPTKHLRT-p Q5M775;T142-p PTSSNTPTPTKHLRT 0.135134212195286 0.00767604283467135 -0.262333333333333 -0.542333333333333 17.8330522950844 30.1905649882177 -0.262333333333333 -0.542333333333333 0.016470044420772 0.00095706955481607 -3.42855680297513 -6.47995642302644 Q5M775 SPECC1 Q5M775.T142.p_SPECC1 Q5M775_T142t _1_1_142_142 Q5M775 Q5M775|Q5M775-4|Q5M775-2|Q5M775-3|Q5M775-5 Cytospin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8976.8976.3 15.22 15.22 2.745 9 1 1 0 677.0135 1949.0592 T142t TMT10 131 (K) SVSSPTSSNTPtPTK (H) S(0.0)VS(0.0)S(0.0)PT(0.0)S(0.0)S(0.0)NT(0.0)PT(0.99)PT(0.0)K K:TMT10,t:Phosphorylated T SPECC1 119267.5 1 5 330.1 358.68 HUMAN 1 -17.8331 -30.1906 PTSSSVDTMSLLSKI-p Q5VT52;T749-p PTSSSVDTMSLLSKI 0.19388225330361 0.948164878434691 0.231333333333333 -0.0103333333333333 13.9113600915669 0.330982550024813 0.231333333333333 -0.0103333333333333 0.0406316062157327 0.926620160650957 2.67665844058491 -0.0964602598631832 Q5VT52 RPRD2 Q5VT52.T749.p_RPRD2 Q5VT52_T749t_1_1_749_749 Q5VT52 Q5VT52|Q5VT52-3|Q5VT52-2|Q5VT52-5 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16254.16254.4 7.52 7.47 1.344 10 1 1 0 893.9313 3460.7464 M738m M739m T749t TMT10 730 (R) SGTPTQDEmmDKPTSSSVDtMSLLSK (I) S(0.0)GT(0.0)PT(0.0)QDEM(0.99)M(0.99)DKPT(0.0)S(0.0)S(0.0)S(0.0)VDT(0.99)M(0.0)S(0.0)LLS(0.0)K K:TMT10,m:Oxidized methionine,t:Phosphorylated T RPRD2 156473.2 2 17 172.1 488.65 HUMAN 1 13.9114 -0.331 PTTAEACSPSPAVQT-p Q9NUA8;S214-p PTTAEACSPSPAVQT 0.49228232468652 0.0526693985714292 0.096 0.226666666666667 5.667861036819 17.055625965208 0.096 0.226666666666667 0.271152676925577 0.0196986926198108 1.2251617688058 3.27109610930915 Q9NUA8 ZBTB40 Q9NUA8.S214.p_ZBTB40 Q9NUA8_S214s _1_1_214_214 Q9NUA8 Q9NUA8|F8WAI8|Q9NUA8-2 Zinc finger and BTB domain-containing protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19119.19119.3 22.91 22.91 2.362 8 1 1 0 1144.2125 3350.6462 S214s TMT10 199 (R) NAETPAETPTTAEACsPSPAVQTFSEAK (K) NAET(0.0)PAET(0.0)PT(0.0)T(0.0)AEACS(0.99)PS(0.0)PAVQT(0.0)FS(0.0)EAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZBTB40 140797.4 9 2 1500.1 135.98 HUMAN 1 5.6679 17.0556 PTTATKISPKEEERK-p O14974;S422-p PTTATKISPKEEERK 0.852742978991457 0.530785724898093 0.0536666666666667 -0.0856666666666667 1.34138757462308 3.69864719018162 0.0536666666666667 -0.0856666666666667 0.734279227827323 0.426712417301098 0.357447911413212 -0.858931238266984 O14974 PPP1R12A O14974.S422.p_PPP1R12A O14974_S422s _1_1_422_422 O14974 O14974|O14974-2|O14974-3|O14974-4|O14974-5 Protein phosphatase 1 regulatory subunit 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14243.14243.4 9.75 9.75 9.747 4 1 1 0 579.6024 2235.4246 S422s TMT10 413 (K) KFPTTATKIsPK (E) KFPT(0.0)T(0.0)AT(0.0)KIS(0.99)PK K:TMT10,s:Phosphorylated S PPP1R12A 115678 6 3 286.1 385.3 HUMAN 1 1.3414 -3.6986 PTTGEPATPKRRKAE-p Q8N5Y2;T334-p PTTGEPATPKRRKAE 0.957735854099029 0.0408431144222722 -0.0156666666666667 -0.264666666666667 0.365907102713748 18.616270669673 -0.0156666666666667 -0.264666666666667 0.919198463498423 0.0137522238539689 -0.106267675183016 -3.58501581494613 Q8N5Y2 MSL3 Q8N5Y2.T334.p_MSL3 Q8N5Y2_T334t _1_1_334_334 Q8N5Y2 Q8N5Y2|Q8N5Y2-3|Q8N5Y2-2|Q8N5Y2-5|Q8N5Y2-6|Q8N5Y2-4 Male-specific lethal 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21297.21297.5 18.23 15.08 4.007 11 1 1 0 794.9971 3890.9911 T334t TMT10 304 (R) SQEELSPSPPLLNPSTPQSTESQPTTGEPAtPK (R) S(0.0)QEELS(0.0)PS(0.0)PPLLNPS(0.0)T(0.0)PQS(0.0)T(0.0)ES(0.0)QPT(0.0)T(0.0)GEPAT(0.99)PK K:TMT10,t:Phosphorylated T MSL3 60279.1 2 2 1755.1 117.41 HUMAN 1 -0.3659 -18.6163 PTTKGSKSPAKVSDG-p Q7Z6Z7;S3555-p PTTKGSKSPAKVSDG 0.0930004911854097 0.010432123593786 2.90533333333333 -1.69366666666667 21.9467969895609 27.8189418977573 2.90533333333333 -1.69366666666667 0.00638734392167961 0.00165236432635355 4.30977372345536 -5.78671195704139 Q7Z6Z7 HUWE1 Q7Z6Z7.S3555.p_HUWE1 Q7Z6Z7_S3555s _1_1_3555_3555 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10433.10433.4 14.32 8.14 1.338 7 1 1 0 710.3828 2758.5393 S3555s TMT10 3552 (K) GSKsPAKVSDGGSSSTDFK (M) GS(0.0)KS(0.99)PAKVS(0.0)DGGS(0.0)S(0.0)S(0.0)T(0.0)DFK K:TMT10,s:Phosphorylated S HUWE1 485818.9 1 56 11.1 1210.45 HUMAN 1 21.9468 -27.8189 PTTPLPQTPTRRTEL-p Q8WU20;T463-p PTTPLPQTPTRRTEL 0.20055874973276 0.265566979326147 0.199666666666667 0.14 13.5696370959726 7.58310158428816 0.199666666666667 0.14 0.0439578345834784 0.174457579089969 2.61423697178147 1.56227615908369 Q8WU20 FRS2 Q8WU20.T463.p_FRS2 Q8WU20_T463t _1_1_463_463 Q8WU20 Q8WU20 Fibroblast growth factor receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8738.8738.3 12.41 12.41 1.562 5 1 1 0 592.3185 1694.9751 T463t TMT10 455 (K) TPTTPLPQtPTRR (T) T(0.0)PT(0.0)T(0.0)PLPQT(0.99)PT(0.0)RR t:Phosphorylated T FRS2 57427.4 3 15 301.1 376.53 HUMAN 1 13.5696 7.5831 PTTQHDKSGEWQETS-p Q7Z5K2-2;S1106-p PTTQHDKSGEWQETS 0.335984361418148 0.0107864844863671 -0.379666666666667 -0.557333333333333 8.83498077333573 27.5668654415731 -0.379666666666667 -0.557333333333334 0.13076813281474 0.00175111011167302 -1.77979769285492 -5.71655572607478 Q7Z5K2 WAPL Q7Z5K2.2.S1106.p_WAPL Q7Z5K2-2_S1106s _1_1_1106_1106 Q7Z5K2-2 Q7Z5K2-3|Q7Z5K2-2|Q8WVX6 Isoform 2 of Wings apart-like protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19111.19111.5 25.02 20.57 1.107 9 1 1 0 967.0729 4751.373 S1106s TMT10 1097 (K) DAPTTQHDKsGEWQETSGEIQWVSTEKTDGTEEK (H) DAPT(0.0)T(0.0)QHDKS(0.99)GEWQET(0.0)S(0.0)GEIQWVS(0.0)T(0.0)EKT(0.0)DGT(0.0)EEK K:TMT10,s:Phosphorylated S WAPL 138966.1 5 16 244.1 413.16 HUMAN 1 -8.835 -27.5669 PTVKKEESPPPPKVV-p P78332;S891-p PTVKKEESPPPPKVV 0.633706957274332 0.0194984579703194 -0.106666666666667 0.326666666666667 3.68854958891655 23.4785325930625 -0.106666666666667 0.326666666666667 0.427705702959206 0.00448897038960451 -0.857106845190536 4.66310828345301 P78332 RBM6 P78332.S891.p_RBM6 P78332_S891s _1_1_891_891 P78332 P78332|E9PGM9|P78332-2 RNA-binding protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6841.7054.3 14.53 13.66 99 1 1 1 0 592.6685 1696.0248 S891s TMT10 888 (K) KEEsPPPPK (V) KEES(1.0)PPPPK K:TMT10,s:Phosphorylated S RBM6 129269.2 6 3 1383.1 148.19 HUMAN 1 -3.6885 23.4785 PTVNRANSGQAHKDE-p Q8IY63;S241-p PTVNRANSGQAHKDE 0.93808991117819 0.0997308145368961 0.0286666666666667 0.26 0.541104519864394 13.2325258975165 0.0286666666666667 0.26 0.882855339593755 0.047505884688889 0.15444582748276 2.55162247076656 Q8IY63 AMOTL1 Q8IY63.S241.p_AMOTL1 Q8IY63_S241s _1_1_241_241 Q8IY63 Q8IY63|Q8IY63-2 Angiomotin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6602.6602.4 15.32 15.32 99 1 1 1 0 534.791 2056.1754 S241s TMT10 239 (R) ANsGQAHKDEALK (E) ANS(1.0)GQAHKDEALK K:TMT10,s:Phosphorylated S AMOTL1 106914.7 1 1 1931.1 106.33 HUMAN 1 0.5411 13.2325 PTVRRALSSAGPIPI-p Q765P7;S579-p PTVRRALSSAGPIPI 0.454187811521765 0.0279776566989861 -0.148333333333333 -0.31 6.32133710917408 21.0495486918476 -0.148333333333333 -0.31 0.23327397460108 0.00785317238607403 -1.34161157834376 -4.10380346562162 Q765P7 MTSS1L Q765P7.S579.p_MTSS1L Q765P7_S579s _1_1_579_579 Q765P7 Q765P7|A0A087WXN9 MTSS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23861.23861.4 18.28 18.28 1.146 2 1 1 0 627.3819 2426.5375 S579s TMT10 576 (R) RALsSAGPIPIRPPIVPVK (T) RALS(0.99)S(0.0)AGPIPIRPPIVPVK K:TMT10,s:Phosphorylated S MTSS1L 80498.5 8 6 425.1 319.48 HUMAN 1 -6.3213 -21.0495 PTVTRQNTRGPLRRQ-p Q9UPX8-3;T1269-p PTVTRQNTRGPLRRQ 0.591128756804733 0.950561945305192 -0.0996666666666667 0.0216666666666667 4.20404280098627 0.315205976926169 -0.0996666666666666 0.0216666666666667 0.379835646745118 0.929992406083969 -0.955937106013372 0.0920121376747802 Q9UPX8 SHANK2 Q9UPX8.3.T1269.p_SHANK2 Q9UPX8-3_T1269t _1_1_1269_1269 Q9UPX8-3 Q9UPX8-3 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3916.3916.3 9.75 8.19 99 1 1 1 0 417.5575 1170.6905 T1269t TMT10 1267 (R) QNtRGPLR (R) QNT(1.0)RGPLR t:Phosphorylated T SHANK2 202341.2 1 20 86.1 628.23 HUMAN 1 -4.204 0.3152 PTVYIAASPPNTDEL-p Q9NYJ8;S372-p PTVYIAASPPNTDEL 0.595959417863175 0.248200560808315 -0.100666666666667 -0.124333333333333 4.14793457135938 7.97257515995149 -0.100666666666667 -0.124333333333333 0.38477473067431 0.159493314721428 -0.945303885516078 -1.62988801165775 Q9NYJ8 TAB2 Q9NYJ8.S372.p_TAB2 Q9NYJ8_S372s _1_1_372_372 Q9NYJ8 Q9NYJ8|Q9NYJ8-2|A0A1B0GV57 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21948.22154.3 23.29 23.29 8.088 5 1 1 0 838.4033 2433.2281 S372s TMT10 363 (R) NQPTVYIAAsPPNTDELMSR (S) NQPT(0.0)VY(0.0)IAAS(0.99)PPNT(0.0)DELMS(0.0)R s:Phosphorylated S TAB2 77063.4 3 1 3124.1 60.16 HUMAN 1 -4.1479 -7.9726 PTWKEPVSPMELTGP-p F5GX28;S600-p PTWKEPVSPMELTGP 0.411768177963486 0.0814728566442686 -0.116333333333333 0.211666666666667 7.10949996091133 14.438027548739 -0.116333333333333 0.211666666666667 0.194558407988323 0.0359912760946736 -1.48016731970364 2.77197583028243 F5GX28 KDM4B F5GX28.S600.p_KDM4B F5GX28_S600s _1_1_600_600 F5GX28 F5GX28|O94953|A0A0C4DFL8 Lysine-specific demethylase 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21383.21383.4 22.8 22.8 2.378 5 1 1 0 806.3958 3142.5879 S600s TMT10 592 (K) GPTWKEPVsPMELTGPEDGAASSGAGR (M) GPT(0.0)WKEPVS(0.99)PMELT(0.0)GPEDGAAS(0.0)S(0.0)GAGR K:TMT10,s:Phosphorylated S KDM4B 127963.8 9 3 1830.1 112.42 HUMAN 1 -7.1095 14.438 PTYEEFPSLESDSLL-p Q9Y487;S154-p PTYEEFPSLESDSLL 0.82811120087959 0.903302619511251 0.0343333333333333 0.0153333333333333 1.57283099462959 0.615913621227187 0.0343333333333333 0.0153333333333333 0.696172558704941 0.867778004444534 0.411977240057093 0.174533826842672 Q9Y487 ATP6V0A2 Q9Y487.S154.p_ATP6V0A2 Q9Y487_S154s _1_1_154_154 Q9Y487 Q9Y487|Q8TBM3 V-type proton ATPase 116 kDa subunit a isoform 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32717.32717.3 25.24 25.24 2.866 7 1 1 0 1198.8569 3514.5868 S154s TMT10 142 (R) NVEFEPTYEEFPsLESDSLLDYSCMQR (L) NVEFEPT(0.0)Y(0.0)EEFPS(0.99)LES(0.0)DS(0.0)LLDY(0.0)S(0.0)CMQR C:Carbamidomethylation,s:Phosphorylated S ATP6V0A2 99164.6 6 1 2621.1 76.56 HUMAN 1 1.5728 0.6159 PTYTIPLSPVLSPTL-p Q9NPI6;S315-p PTYTIPLSPVLSPTL 0.541115801504562 0.409417401052767 0.087 0.100666666666667 4.91992531633535 5.16056173902544 0.087 0.100666666666667 0.322112418302794 0.304750078456439 1.08936335985307 1.13316679813697 Q9NPI6 DCP1A Q9NPI6.S315.p_DCP1A Q9NPI6_S315s _1_1_315_315 Q9NPI6 Q9NPI6|Q9NPI6-2 mRNA-decapping enzyme 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30757.30757.3 17.28 17.28 1.106 8 1 1 0 1209.9874 3547.9726 S315s TMT10 306 (K) HAPTYTIPLsPVLSPTLPAEAPTAQVPPSLPR (N) HAPT(0.0)Y(0.0)T(0.0)IPLS(0.99)PVLS(0.0)PT(0.0)LPAEAPT(0.0)AQVPPS(0.0)LPR s:Phosphorylated S DCP1A 63479.5 6 5 344.1 352.95 HUMAN 1 4.9199 5.1606 PVADMPKSPFKRKRT-p Q6PCB5;S536-p PVADMPKSPFKRKRT 0.10484325272307 0.00159719551865466 -0.504666666666667 -0.887333333333333 20.6460675245533 44.7580962936131 -0.504666666666667 -0.887333333333333 0.00861773722989654 3.34341564727327e-05 -4.01899582457589 -12.4934254568821 Q6PCB5 RSBN1L Q6PCB5.S536.p_RSBN1L Q6PCB5_S536s _1_1_536_536 Q6PCB5 Q6PCB5|Q6PCB5-2 Round spermatid basic protein 1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30254.30254.5 21.91 18.63 21.551 2 1 1 0 782.9957 3830.9887 S536s TMT10 512 (K) DSDDGPIMWVRPGEQMIPVADMPKsPFK (R) DS(0.0)DDGPIMWVRPGEQMIPVADMPKS(0.99)PFK K:TMT10,s:Phosphorylated S RSBN1L 95438.4 6 4 1544.1 132.85 HUMAN 1 -20.6461 -44.7581 PVAEVKSSPVGGGPR-p Q00587;S303-p PVAEVKSSPVGGGPR 0.132087959934017 0.729961018828838 -0.311 -0.0613333333333333 18.1473185827885 1.8839545442453 -0.311 -0.0613333333333334 0.0153203307626068 0.648044076958286 -3.49214128643012 -0.482891877283294 Q00587 CDC42EP1 Q00587.S303.p_CDC42EP1 Q00587_S303s _1_1_303_303 Q00587 Q00587|Q00587-2 Cdc42 effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4655.4672.2 7.99 7.99 1.846 2 1 1 0 561.777 1042.5843 S303s TMT10 302 (K) SsPVGGGPR (G) S(0.0)S(0.99)PVGGGPR s:Phosphorylated S CDC42EP1 40408.2 3 7 1362.1 149.93 HUMAN 1 -18.1473 -1.884 PVAGGLLSPARLYAI-p P42704;S54-p PVAGGLLSPARLYAI 0.386150789195061 0.0112328726524984 -0.119 -0.576333333333333 7.65029931266138 27.2959862645448 -0.119 -0.576333333333333 0.171778999421586 0.00186380886701533 -1.57443138986596 -5.64188575603911 P42704 LRPPRC P42704.S54.p_LRPPRC P42704_S54s _1_1_54_54 P42704 P42704|A0A0C4DG06|B8ZZ38 Leucine-rich PPR motif-containing protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18064.18064.2 14.24 14.24 99 1 1 1 0 737.9031 1394.8317 S54s TMT10 45 (R) AGPVAGGLLsPAR (L) AGPVAGGLLS(1.0)PAR s:Phosphorylated S LRPPRC 159100.3 2 1 2473.1 81.91 HUMAN 1 -7.6503 -27.296 PVANGPRSPPSLRCG-p Q66K74;S582-p PVANGPRSPPSLRCG 0.321302149653388 0.193374944683064 0.156 0.159666666666667 9.22927569741405 9.38180234053064 0.156 0.159666666666667 0.119418725062586 0.115297466913907 1.84805909384621 1.87377198511348 Q66K74 MAP1S Q66K74.S582.p_MAP1S Q66K74_S582s _1_1_582_582 Q66K74 Q66K74|Q66K74-2 Microtubule-associated protein 1S HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11880.11880.5 18.54 18.54 1.548 6 1 1 0 597.3212 2902.6052 S582s TMT10 564 (R) KAPSTSHSGFPPVANGPRsPPSLR (C) KAPS(0.0)T(0.0)S(0.0)HS(0.0)GFPPVANGPRS(0.99)PPS(0.0)LR K:TMT10,s:Phosphorylated S MAP1S 113179.3 9 5 456.1 307.14 HUMAN 1 9.2293 9.3818 PVAPQVPSPGGAPGQ-p Q9NZB2-6;S383-p PVAPQVPSPGGAPGQ 0.140218997800079 0.614677059066368 -0.509 0.082 17.4561208859899 2.87232098703215 -0.509 0.082 0.0179633739726655 0.516140456148075 -3.35301876557233 0.694262669983154 Q9NZB2 FAM120A Q9NZB2.6.S383.p_FAM120A Q9NZB2-6_S383s _1_1_383_383 Q9NZB2-6 Q9NZB2-6|Q9NZB2-4|Q9NZB2-5|Q9NZB2-2|Q5T035 Isoform F of Constitutive coactivator of PPAR-gamma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.30129.30129.4 20.84 20.84 1.671 8 1 1 0 993.5142 3891.058 S383s TMT10 376 (K) PVAPQVPsPGGAPGQGPYPYSLSEPAPLTLDTSGK (N) PVAPQVPS(0.99)PGGAPGQGPY(0.0)PY(0.0)S(0.0)LS(0.0)EPAPLT(0.0)LDT(0.0)S(0.0)GK K:TMT10,s:Phosphorylated S FAM120A 126524.7 3 3 839.1 214.86 HUMAN 1 -17.4561 2.8723 PVAQRPDSPGGGLQA-p Q5JVS0;S108-p PVAQRPDSPGGGLQA 0.3230069107756 0.0189342040006697 0.287333333333333 -0.467333333333333 9.18902858494873 23.6956949442643 0.287333333333333 -0.467333333333333 0.120530550883862 0.00427002586373254 1.84108968062312 -4.71535269085302 Q5JVS0 HABP4 Q5JVS0.S108.p_HABP4 Q5JVS0_S108s _1_1_108_108 Q5JVS0 Q5JVS0|Q5JVS0-2 Intracellular hyaluronan-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14258.14258.5 22.62 22.75 10.792 2 1 1 0 625.5527 3043.762 S108s TMT10 96 (R) KSLPAPVAQRPDsPGGGLQAPGQK (R) KS(0.0)LPAPVAQRPDS(0.99)PGGGLQAPGQK K:TMT10,s:Phosphorylated S HABP4 45898.7 10 3 1699.1 120.32 HUMAN 1 9.189 -23.6957 PVAVSLRSDGSENLC-p E7ETA6;S869-p PVAVSLRSDGSENLC 0.856181591614162 0.115747127817729 -0.0263333333333333 -0.198 1.31262823686475 12.3528178610432 -0.0263333333333334 -0.198 0.739157820655095 0.0581725650469147 -0.350558474904738 -2.39383957082788 E7ETA6 PCM1 E7ETA6.S869.p_PCM1 E7ETA6_S869sS872s_2_2_869_872 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15922.15922.4 15.36 15.36 1.152 7 2 2 0 901.6761 3443.7499 S869s S872s TMT10 853 (R) RQGLAETASPVAVSLRsDGsENLCTPQQSR (T) RQGLAET(0.0)AS(0.0)PVAVS(0.0)LRS(0.99)DGS(0.99)ENLCT(0.0)PQQS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PCM1 229381.8 6 64 13.1 1159.95 HUMAN 1 -1.3126 -12.3528 PVCKDRASPADLRTN-p Q9UPQ4;S65-p PVCKDRASPADLRTN 0.153998790819573 0.525135560053205 -0.372333333333333 -0.119333333333333 16.3240990977605 3.7585308709978 -0.372333333333333 -0.119333333333333 0.0233125666195742 0.420868975633801 -3.13067065662868 -0.870540656047032 Q9UPQ4 TRIM35 Q9UPQ4.S65.p_TRIM35 Q9UPQ4_S65s _1_1_65_65 Q9UPQ4 Q9UPQ4|Q9UPQ4-2|E5RGB3 Tripartite motif-containing protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5469.5469.3 9.9 3.99 99 1 1 1 0 437.2205 1229.68 S65s TMT10 62 (K) DRAsPADLR (T) DRAS(1.0)PADLR s:Phosphorylated S TRIM35 57851.6 1 3 4342.1 33.16 HUMAN 1 -16.3241 -3.7585 PVCPRSASASPLTPC-p Q3KQU3;S366-p PVCPRSASASPLTPC 0.251309962972126 0.143883461976472 0.239333333333333 0.16 11.4450940023558 11.0907248566396 0.239333333333333 0.16 0.0716952857080932 0.0777906704145158 2.23427825383565 2.17102311917927 Q3KQU3 MAP7D1 Q3KQU3.S366.p_MAP7D1 Q3KQU3_S366s _1_1_366_366 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12993.12993.2 14.39 14.39 2.27 6 1 1 0 871.9212 1662.8682 S366s TMT10 364 (R) SAsASPLTPCSVTR (S) S(0.0)AS(0.99)AS(0.0)PLT(0.0)PCS(0.0)VT(0.0)R C:Carbamidomethylation,s:Phosphorylated S MAP7D1 93160.6 3 11 160.1 495.56 HUMAN 1 11.4451 11.0907 PVCRYCQTPEPVEEN-p Q7Z569;T308-p PVCRYCQTPEPVEEN 0.272596532101247 0.964453765596116 -0.164 -0.0053333333333333 10.6922503852016 0.224671939281066 -0.164 -0.00533333333333331 0.0852658177348983 0.949582726806248 -2.10227746957381 -0.0662109681230396 Q7Z569 BRAP Q7Z569.T308.p_BRAP Q7Z569_T308t _1_1_308_308 Q7Z569 Q7Z569|J3KNN7|Q7Z569-2 BRCA1-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11393.11393.3 11.08 11.08 4.468 2 1 1 0 677.9884 1951.9835 T308t TMT10 305 (R) YCQtPEPVEENK (C) Y(0.0)CQT(0.99)PEPVEENK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T BRAP 68615.7 1 7 1332.1 153 HUMAN 1 -10.6923 -0.2247 PVCSPAGSEGTPKGS-p Q6KC79;S284-p PVCSPAGSEGTPKGS 0.659007682953711 0.523419799596643 0.0743333333333333 0.104 3.39729428854139 3.77770782179437 0.0743333333333333 0.104 0.457373050265685 0.419014659995881 0.800013991087011 0.874250277400439 Q6KC79 NIPBL Q6KC79.S284.p_NIPBL Q6KC79_S284s _1_1_284_284 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10521.10521.3 12.39 12.39 1.167 4 1 1 0 713.019 2057.0738 S284s TMT10 274 (R) SPQPVCSPAGsEGTPK (G) S(0.0)PQPVCS(0.0)PAGS(0.99)EGT(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NIPBL 318099.5 1 4 50.1 752.87 HUMAN 1 3.3973 3.7777 PVDASSVSNNYIQTL-p O60716-3;S171-p PVDASSVSNNYIQTL 0.539914690322165 0.500683105151156 0.0823333333333333 -0.0923333333333333 4.94277009057848 4.02167798582542 0.0823333333333333 -0.0923333333333333 0.320422489960583 0.39612495368216 1.09355990206488 -0.921114471740076 O60716 CTNND1 O60716.3.S171.p_CTNND1 O60716-3_S171s_1_1_171_171 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-21|O60716-23|O60716-24 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26519.26519.3 26.17 26.17 1.199 6 1 1 0 1104.5398 3215.6568 M158m S171s TMT10 152 (R) TVQPVAmGPDGLPVDASSVsNNYIQTLGR (D) T(0.0)VQPVAM(1.0)GPDGLPVDAS(0.0)S(0.0)VS(0.99)NNY(0.0)IQT(0.0)LGR m:Oxidized methionine,s:Phosphorylated S CTNND1 105545.3 6 12 21.1 1014.17 HUMAN 1 4.9428 -4.0217 PVDEDRLSPLVAADS-p Q01094;S375-p PVDEDRLSPLVAADS 0.36371578203964 0.0512721375026201 0.208666666666667 -0.506333333333333 8.15334141405938 17.2209909397042 0.208666666666667 -0.506333333333333 0.152990991285461 0.0189627319483035 1.66175124582861 -3.30372994917317 Q01094 E2F1 Q01094.S375.p_E2F1 Q01094_S375s _1_1_375_375 Q01094 Q01094 Transcription factor E2F1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.29127.29127.4 20.31 20.31 10.812 2 1 1 0 678.6048 2631.4303 S375s TMT10 367 (R) APVDEDRLsPLVAADSLLEHVR (E) APVDEDRLS(0.99)PLVAADS(0.0)LLEHVR s:Phosphorylated S E2F1 47261.3 1 3 3487.1 49.84 HUMAN 1 8.1533 -17.221 PVDNQRGSGLAGPKR-p Q9Y6W5;S284-p PVDNQRGSGLAGPKR 0.0478194935682717 0.00286340568570103 -0.661 -0.769 29.2991430133275 38.4612163478546 -0.661 -0.769 0.00117512941855668 0.000142520837325666 -6.22168815692863 -9.46032393243651 Q9Y6W5 WASF2 Q9Y6W5.S284.p_WASF2 Q9Y6W5_S284s _1_1_284_284 Q9Y6W5 Q9Y6W5 Wiskott-Aldrich syndrome protein family member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9747.9747.2 14.95 4.76 99 1 1 1 0 612.8413 1144.709 S284s TMT10 283 (R) GsGLAGPK (R) GS(1.0)GLAGPK K:TMT10,s:Phosphorylated S WASF2 54511.2 6 5 1819.1 112.9 HUMAN 1 -29.2991 -38.4612 PVDPQHGSKLADYNG-p Q6P4E1;S374-p PVDPQHGSKLADYNG 0.109204251400589 0.309664284842538 -0.422333333333333 0.134666666666667 20.1461500714445 6.72863685604804 -0.422333333333333 0.134666666666667 0.00966907642318672 0.212391100100499 -3.9103861819878 1.41304848014413 Q6P4E1 CASC4 Q6P4E1.S374.p_CASC4 Q6P4E1_S374s _1_1_374_374 Q6P4E1 Q6P4E1-4|Q6P4E1-5 Protein CASC4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17793.17793.3 16.9 16.9 1.843 2 1 1 0 791.0386 2291.1344 S374s TMT10 360 (R) FFDENESPVDPQHGsK (L) FFDENES(0.0)PVDPQHGS(0.99)K K:TMT10,s:Phosphorylated S CASC4 48977.6 2 5 2657.1 74.96 HUMAN 1 -20.1462 6.7286 PVDPRRRSLPAGDAL-p V9GYM8;S931-p PVDPRRRSLPAGDAL 0.676076782608707 0.99377448792219 0.0576666666666667 0.001 3.1845861630623 0.0380729750318221 0.0576666666666667 0.000999999999999997 0.480331848629372 0.991271688348794 0.7576608285852 0.0114529260399908 V9GYM8 NotFound V9GYM8.S931.p_NotFound V9GYM8_S931s _1_1_931_931 V9GYM8 V9GYM8|Q92974|Q92974-2|Q92974-3 Rho guanine nucleotide exchange factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29630.29630.3 21.92 21.92 12.215 4 1 1 0 780.3919 2259.1971 S931s TMT10 931 (R) sLPAGDALYLSFNPPQPSR (G) S(0.99)LPAGDALY(0.0)LS(0.0)FNPPQPS(0.0)R s:Phosphorylated S ARHGEF2 117095.6 6 18 380.1 335.31 HUMAN 1 3.1846 0.0381 PVEALPPSPLELSRV-p O43379-4;S1410-p PVEALPPSPLELSRV 0.190631118670779 0.00627124365275306 -0.334666666666667 -0.567333333333333 14.0787047019512 31.7270543806498 -0.334666666666667 -0.567333333333333 0.0390957482802947 0.000671884406650899 -2.70738027538818 -6.96340363490237 O43379 WDR62 O43379.4.S1410.p_WDR62 O43379-4_S1410s _1_1_1410_1410 O43379-4 O43379-4 Isoform 4 of WD repeat-containing protein 62 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.35887.36083.3 18.72 18.72 3.126 3 1 1 0 866.7805 2518.3543 S1410s TMT10 1397 (R) WSEPWVPVEALPPsPLELSR (V) WS(0.0)EPWVPVEALPPS(0.99)PLELS(0.0)R s:Phosphorylated S WDR62 168676.3 3 13 671.1 248.72 HUMAN 1 -14.0787 -31.7271 PVEIEIETPEQAKTR-p Q01831;T169-p PVEIEIETPEQAKTR 0.565909189704471 0.915319001258995 0.082 -0.011 4.55352687140343 0.540134407682587 0.082 -0.011 0.350467146736503 0.883052570832018 1.02156465706306 -0.154168926029029 Q01831 XPC Q01831.T169.p_XPC Q01831_T169t _1_1_169_169 Q01831 Q01831 DNA repair protein complementing XP-C cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27650.27650.3 21.13 21.13 15.709 2 1 1 0 963.2181 2807.6737 T169t TMT10 156 (R) SLLPVKPVEIEIEtPEQAK (T) S(0.0)LLPVKPVEIEIET(0.99)PEQAK K:TMT10,t:Phosphorylated T XPC 106806.6 2 3 780.1 226.3 HUMAN 1 4.5535 -0.5401 PVEPCDLTEGFDPSV-p O14893;T37-p PVEPCDLTEGFDPSV 0.77229189221493 0.0782367496253825 -0.0706666666666667 -0.351333333333333 2.14543674849201 14.6845803503487 -0.0706666666666667 -0.351333333333333 0.610177691004998 0.0340049362473468 -0.54077447512593 -2.81770919365487 O14893 GEMIN2 O14893.T37.p_GEMIN2 O14893_T37t _1_1_37_37 O14893 O14893|O14893-2|O14893-3|G5EA29 Gem-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28411.28411.4 11.87 11.87 1.638 4 1 1 0 898.4485 3510.8253 T37t TMT10 28 (R) LLPVEPCDLtEGFDPSVPPRTPQEYLRR (V) LLPVEPCDLT(0.99)EGFDPS(0.0)VPPRT(0.0)PQEY(0.0)LRR C:Carbamidomethylation,t:Phosphorylated T GEMIN2 32041 1 1 1657.1 123.25 HUMAN 1 -2.1454 -14.6846 PVERRRPSPQPSPRD-p Q9UQ35;S2702-p PVERRRPSPQPSPRD 0.971073575321284 0.0438188430802112 0.00633333333333332 0.244666666666667 0.250091700046481 18.197874499238 0.00633333333333331 0.244666666666667 0.944040942919073 0.0151430218876388 0.073510273920556 3.4995177671725 Q9UQ35 SRRM2 Q9UQ35.S2702.p_SRRM2 Q9UQ35_S2702s _1_1_2702_2702 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.2819.2819.2 12.17 6.95 3.121 2 1 1 0 551.2635 1021.5538 S2702s Hydrogen 2700 (R) RPsPQPSPR (D) RPS(0.99)PQPS(0.0)PR s:Phosphorylated S SRRM2 300351.7 21 166 2.1 3310.34 HUMAN 1 0.2501 18.1979 PVFEDEQSNIVDILY-p Q6P4Q7;S416-p PVFEDEQSNIVDILY 0.830364356065644 0.0375057703303839 -0.0403333333333333 0.403 1.55502697590649 19.1578827642494 -0.0403333333333333 0.403 0.699032394756296 0.0121398053575649 -0.407837938507389 3.6972330092847 Q6P4Q7 CNNM4 Q6P4Q7.S416.p_CNNM4 Q6P4Q7_S416s _1_1_416_416 Q6P4Q7 Q6P4Q7 Metal transporter CNNM4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37533.37533.3 15.01 11.06 6.137 2 1 1 0 887.1389 2579.4373 S416s TMT10 408 (R) IPVFEDEQsNIVDILYVK (D) IPVFEDEQS(0.99)NIVDILY(0.0)VK K:TMT10,s:Phosphorylated S CNNM4 87175.9 1 1 1521.1 134.29 HUMAN 1 -1.555 19.1579 PVFHNGSTPTLGETP-p Q9Y6M7-13;T442-p PVFHNGSTPTLGETP 0.243289281106883 0.0697146669156021 -0.186 -0.208 11.7433409531497 15.3810696835071 -0.186 -0.208 0.0669369476813711 0.0289663004904645 -2.28689145357723 -2.94824725657643 Q9Y6M7 SLC4A7 Q9Y6M7.13.T442.p_SLC4A7 Q9Y6M7-13_S441sT442t_2_2_441_442 Q9Y6M7-13 Q9Y6M7-7|Q9Y6M7-8|E9PFN4|Q9Y6M7-12|A0A0A0MST8|Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-9|Q9Y6M7-2|Q9Y6M7-3|Q9Y6M7-4|Q9Y6M7-5|Q9Y6M7-10|Q9Y6M7-14|Q9Y6M7-11 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17531.17531.3 18.03 18.03 1.569 4 2 2 0 847.7695 2381.3593 S441s T442t Hydrogen 433 (R) KIPVFHNGstPTLGETPK (E) KIPVFHNGS(0.99)T(0.99)PT(0.0)LGET(0.0)PK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T SLC4A7 128884.6 9 24 207.1 445.25 HUMAN 1 -11.7433 -15.3811 PVFKHRDSIVETLKR-p A0A087WYN9;S580-p PVFKHRDSIVETLKR 0.222409462668413 0.00424728463269766 -0.625 0.661 12.5618868963687 34.8733470525035 -0.625 0.661 0.055438479487648 0.000325585679530113 -2.43241279121141 8.04770412000254 A0A087WYN9 NotFound A0A087WYN9.S580.p_NotFound A0A087WYN9_S580s _1_1_580_580 A0A087WYN9 A0A087WYN9|Q7Z478 ATP-dependent RNA helicase DHX29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9984.9984.3 10.88 10.88 4.157 2 1 1 0 579.3229 1655.9845 S580s TMT10 577 (K) HRDsIVETLK (R) HRDS(0.99)IVET(0.0)LK K:TMT10,s:Phosphorylated S DHX29 156372.9 3 7 2368.1 86.39 HUMAN 1 -12.5619 34.8733 PVFLRSMSAPSDLEM-p J3KPF0;S1527-p PVFLRSMSAPSDLEM 0.48046826185149 0.19052992766726 0.103 0.152666666666667 5.85957090221661 9.46896681153406 0.103 0.152666666666667 0.259443568856413 0.113006472558733 1.25950663758994 1.88886159944893 J3KPF0 NotFound J3KPF0.S1527.p_NotFound J3KPF0_S1527s _1_1_1527_1527 J3KPF0 J3KPF0|F8VWT9|Q9Y4D8|Q9Y4D8-4|Q9Y4D8-2 Probable E3 ubiquitin-protein ligase HECTD4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29304.29304.3 28.21 28.21 2.135 4 1 1 0 851.0477 2471.1632 S1527s TMT10 1525 (R) SMsAPSDLEMIGNEDLEFTR (A) S(0.0)MS(0.99)APS(0.0)DLEMIGNEDLEFT(0.0)R s:Phosphorylated S HECTD4 490564.1 5 4 927.1 199.75 HUMAN 1 5.8596 9.469 PVFSDEDSDLDFDIS-p O00566;S171-p PVFSDEDSDLDFDIS 0.104875722477992 0.00272422972588299 0.359 0.772 20.6410828035363 38.9282413940858 0.359 0.772 0.00862763412695534 0.000127989947402138 4.01790449001428 9.65959417521667 O00566 MPHOSPH10 O00566.S171.p_MPHOSPH10 O00566_S171s _1_1_171_171 O00566 O00566|U3KQ48 U3 small nucleolar ribonucleoprotein protein MPP10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29360.29360.5 22.23 22.23 3.414 5 1 1 0 680.1386 3316.704 S171s TMT10 163 (K) SPVFSDEDsDLDFDISKLEQQSK (V) S(0.0)PVFS(0.0)DEDS(0.99)DLDFDIS(0.0)KLEQQS(0.0)K K:TMT10,s:Phosphorylated S MPHOSPH10 78976.5 2 2 2195.1 93.81 HUMAN 1 20.6411 38.9282 PVFSESLSD______-p O60220;S96-p PVFSESLSD______ 0.409512605417896 0.0339299464827186 0.112666666666667 0.362666666666667 7.14737405964864 19.8082489635044 0.112666666666667 0.362666666666667 0.192869073412411 0.0104514152599415 1.48678640870004 3.8343746957626 O60220 TIMM8A O60220.S96.p_TIMM8A O60220_S96s _1_1_96_96 O60220 O60220 Mitochondrial import inner membrane translocase subunit Tim8 A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17615.17615.2 19.39 16.78 3.921 4 1 1 0 867.4428 1653.91 S96s TMT10 87 (K) SKPVFSESLsD (-) S(0.0)KPVFS(0.0)ES(0.0)LS(0.99)D K:TMT10,s:Phosphorylated S TIMM8A 11226.4 4 5 3648.1 46.12 HUMAN 1 7.1474 19.8082 PVFTRQDSNRSEKEA-p Q9Y520-7;S635-p PVFTRQDSNRSEKEA 0.395891044587101 0.772336891145063 0.152 -0.03 7.42476422832465 1.55190200505845 0.152 -0.03 0.1809354134591 0.699535565311962 1.53517999753185 -0.407066834846112 Q9Y520 PRRC2C Q9Y520.7.S635.p_PRRC2C Q9Y520-7_S635s _1_1_635_635 Q9Y520-7 Q9Y520-7|Q9Y520-5|E7EPN9|Q9Y520-4|Q9Y520-6|Q9Y520-3|Q9Y520-2 Isoform 7 of Protein PRRC2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8098.8098.5 11.63 7.99 1.294 5 1 1 0 759.7632 3714.8233 S635s TMT10 616 (K) QESENSCNKEEEPVFTRQDsNRSEK (E) QES(0.0)ENS(0.0)CNKEEEPVFT(0.0)RQDS(0.99)NRS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRRC2C 317703.2 6 98 36.3 882.05 HUMAN 1 7.4248 -1.5519 PVGAAGGSSTPSPRP-p A4D1S0;S139-p PVGAAGGSSTPSPRP 0.0722495595033206 0.115578722929137 0.418666666666667 0.169 24.5265669961194 12.3618651864376 0.418666666666667 0.169 0.00352649522708868 0.0580515047247809 4.92486147041477 2.39545089596835 A4D1S0 KLRG2 A4D1S0.S139.p_KLRG2 A4D1S0_S139sS140sT141t_3_3_139_141 A4D1S0 A4D1S0|A4D1S0-2 Killer cell lectin-like receptor subfamily G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10280.10492.3 7.46 7.46 7.457 6 3 3 0 869.7542 2367.3509 S139s S140s T141t TMT10 130 (R) VKPVGAAGGsstPSPRPSTR (F) VKPVGAAGGS(0.99)S(0.99)T(0.99)PS(0.0)PRPS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S,t:Phosphorylated T KLRG2 43534.4 4 18 945.1 197.69 HUMAN 1 24.5266 12.3619 PVGAKGNTPATGTTQ-p Q9P2E9;T191-p PVGAKGNTPATGTTQ 0.96673431981074 0.297798625139437 -0.00766666666666667 -0.123333333333333 0.284624937721343 6.94438937821487 -0.00766666666666668 -0.123333333333333 0.936564099277366 0.202097556292347 -0.0833575646297571 -1.45087765899717 Q9P2E9 RRBP1 Q9P2E9.T191.p_RRBP1 Q9P2E9_T191t _1_1_191_191 Q9P2E9 Q9P2E9|A0A0A0MRV0|Q9P2E9-2|A0A087WVV2 Ribosome-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5311.5311.3 11.17 10.56 2.66 4 1 1 0 557.6222 1590.8852 T191t TMT10 189 (K) GNtPATGTTQGK (K) GNT(0.99)PAT(0.0)GT(0.0)T(0.0)QGK K:TMT10,t:Phosphorylated T RRBP1 152868.9 1 4 479.1 299.08 HUMAN 1 -0.2846 -6.9444 PVGDNNFSDSEEGEG-p Q13127;S85-p PVGDNNFSDSEEGEG 0.47332174333296 0.4025652934234 0.104333333333333 0.0816666666666667 5.98355637029429 5.25625781078964 0.104333333333333 0.0816666666666667 0.252141517898991 0.298108403644595 1.28163371840963 1.15057536580844 Q13127 REST Q13127.S85.p_REST Q13127_S85sS87s_2_2_85_87 Q13127 L0B3M6|Q13127|Q13127-4|L0B3Z2|A0A087X1C2|L0B1V4|Q13127-3|A0A1W2PQA1|Q13127-2 RE1-silencing transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28195.28195.5 20.52 20.52 8.369 3 2 2 0 1025.252 4962.312 S85s S87s TMT10 72 (R) QMAELMPVGDNNFsDsEEGEGLEESADIKGEPHGLENMELR (S) Q(0.0)M(0.0)AELM(0.0)PVGDN(0.0)N(0.0)FS(0.99)DS(0.99)EEGEGLEES(0.0)ADIKGEPHGLEN(0.0)M(0.0)ELR K:TMT10,s:Phosphorylated S REST 123239.4 6 58 240.5 415.72 HUMAN 1 5.9836 5.2563 PVGGKAKSPMFPALG-p Q641Q2;S1169-p PVGGKAKSPMFPALG 0.128023476673973 0.031693367045072 -0.330666666666667 -0.273 18.4935631099089 20.2430873674068 -0.330666666666667 -0.273 0.0141463268760529 0.00945564727396569 -3.56285081754221 -3.9275824789545 Q641Q2 FAM21A Q641Q2.S1169.p_FAM21A Q641Q2_S1169s _1_1_1169_1169 Q641Q2 Q641Q2|Q5SRD0 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23305.23305.5 24.29 24.29 10.902 4 1 1 0 832.6635 4079.286 S1169s TMT10 1167 (K) AKsPMFPALGEASSDDDLFQSAKPKPAK (K) AKS(0.99)PMFPALGEAS(0.0)S(0.0)DDDLFQS(0.0)AKPKPAK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 2 62 12.1 1178.3 HUMAN 1 -18.4936 -20.2431 PVGSKAPSIDGKEEL-p Q9H0E9-2;S460-p PVGSKAPSIDGKEEL 0.391150856817222 0.0364204913303259 -0.258 0.257666666666667 7.52925106404674 19.3580008516552 -0.258 0.257666666666667 0.176634239818486 0.0115931088839978 -1.55337410373585 3.73914854029246 Q9H0E9 BRD8 Q9H0E9.2.S460.p_BRD8 Q9H0E9-2_S460s _1_1_460_460 Q9H0E9-2 Q9H0E9|Q9H0E9-2|B5MCW3|Q9H0E9-4|Q9H0E9-3 Isoform 2 of Bromodomain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20131.20131.4 18.9 18.9 3.096 3 1 1 0 899.2418 3513.9822 S460s TMT10 447 (R) SGVAEAPVGSKAPsIDGKEELDLAEK (M) S(0.0)GVAEAPVGS(0.0)KAPS(0.99)IDGKEELDLAEK K:TMT10,s:Phosphorylated S BRD8 103294.1 7 6 654.1 253.82 HUMAN 1 -7.5293 19.358 PVGVPNESQALSQRF-p P06401;S666-p PVGVPNESQALSQRF 0.16127524660131 0.168211006739333 0.282333333333333 0.191333333333333 15.8637440626576 10.1831925075645 0.282333333333333 0.191333333333333 0.0259194387790623 0.0958695633316062 3.04207121215549 2.01272520616995 P06401 PGR P06401.S666.p_PGR P06401_S666s _1_1_666_666 P06401 P06401|Q8NG42|P06401-2|Q8NG44|P06401-3|P06401-4 Progesterone receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27062.27062.4 15.8 15.8 3.681 2 1 1 0 668.1019 2589.4198 S666s TMT10 650 (R) ALDAVALPQPVGVPNEsQALSQR (F) ALDAVALPQPVGVPNES(0.99)QALS(0.0)QR s:Phosphorylated S PGR 100348.6 2 16 260.1 397.57 HUMAN 1 15.8637 10.1832 PVHPKPLSPDSRASS-p Q9UHB6;S362-p PVHPKPLSPDSRASS 0.171396449036957 0.0111719717108192 1.36166666666667 -1.274 15.2467813537111 27.3348730503156 1.36166666666667 -1.274 0.0298759596784171 0.00184719478992404 2.92486464915093 -5.6525597728621 Q9UHB6 LIMA1 Q9UHB6.S362.p_LIMA1 Q9UHB6_S362s _1_1_362_362 Q9UHB6 Q9UHB6|Q9UHB6-2|F8VQE1|Q9UHB6-3|F8VS07|F8VRN8 LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10679.10679.5 17.95 13.76 3.653 7 1 1 0 837.6301 4104.1565 S362s TMT10 336 (R) STPAEDDSRDSQVKSEVQQPVHPKPLsPDSR (A) S(0.0)T(0.0)PAEDDS(0.0)RDS(0.0)QVKS(0.0)EVQQPVHPKPLS(0.99)PDS(0.0)R K:TMT10,s:Phosphorylated S LIMA1 85680.5 2 1 42.2 822.82 HUMAN 1 15.2468 -27.3349 PVHSRSSSPIPLTPS-p Q8N5Y2;S400-p PVHSRSSSPIPLTPS 0.185461409283341 0.0044825839263387 0.268 -0.641333333333333 14.3865494798959 34.4635120580206 0.268 -0.641333333333333 0.0364204285741334 0.000357806968290041 2.76417012600228 -7.89878753986567 Q8N5Y2 MSL3 Q8N5Y2.S400.p_MSL3 Q8N5Y2_S400sT405t_2_2_400_405 Q8N5Y2 Q8N5Y2|Q8N5Y2-3|Q8N5Y2-2|Q8N5Y2-6|Q8N5Y2-4 Male-specific lethal 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15096.15096.3 9.67 9.67 1.168 5 2 2 0 577.9633 1571.9409 S400s T405t TMT10 398 (R) SSsPIPLtPSK (E) S(0.0)S(0.0)S(0.99)PIPLT(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T MSL3 60279.1 7 9 1755.1 117.41 HUMAN 1 14.3865 -34.4635 PVHYNGPSKAGYVDF-p P55265-4;S485-p PVHYNGPSKAGYVDF 0.573631485695544 0.555422125061924 -0.083 0.083 4.44214958936978 3.44055917054234 -0.083 0.083 0.359571317236944 0.452839271384084 -1.00075825602648 0.808434996676117 P55265 ADAR P55265.4.S485.p_ADAR P55265-4_S485s _1_1_485_485 P55265-4 P55265-4|P55265-2|P55265-3|P55265-5 Isoform 4 of Double-stranded RNA-specific adenosine deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12905.12905.4 12.78 12.78 3.36 2 1 1 0 526.8045 2024.226 S485s TMT10 475 (R) LKPPVHYNGPsK (A) LKPPVHY(0.0)NGPS(0.99)K K:TMT10,s:Phosphorylated S ADAR 142147.5 1 5 584.1 265.43 HUMAN 1 -4.4421 3.4406 PVIFCHDSPKRVLVS-p Q7RTV3;S26-p PVIFCHDSPKRVLVS 0.152460459216563 0.00359016725229062 0.292666666666667 -0.728333333333333 16.4229636378172 36.4149766199187 0.292666666666667 -0.728333333333333 0.0227878649095329 0.000228298121499025 3.1498308707372 -8.62999950021223 Q7RTV3 ZNF367 Q7RTV3.S26.p_ZNF367 Q7RTV3_S26s _1_1_26_26 Q7RTV3 Q7RTV3|Q7RTV3-2 Zinc finger protein 367 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22716.22716.5 14.8 14.8 99 1 1 1 0 685.3443 3342.7168 S26s TMT10 4 (R) GFEAPMAENPPPPPPPVIFCHDsPKR (V) GFEAPMAENPPPPPPPVIFCHDS(1.0)PKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF367 38923.8 3 1 1434.1 142.66 HUMAN 1 16.423 -36.415 PVILEPETEESENEF-p Q6P0N0;T821-p PVILEPETEESENEF 0.30691553421572 0.00687767716980711 0.150666666666667 -0.489333333333333 9.59309915796801 31.0083125369176 0.150666666666667 -0.489333333333333 0.10982218603897 0.000792809318870008 1.91109614166735 -6.7337199553289 Q6P0N0 MIS18BP1 Q6P0N0.T821.p_MIS18BP1 Q6P0N0_T821tS824s_2_2_821_824 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32694.33111.3 18.54 15.44 4.834 5 2 2 0 1105.1898 3153.6244 T821t S824s TMT10 809 (R) NTSNIPVILEPEtEEsENEFYIK (Q) NT(0.0)S(0.0)NIPVILEPET(0.99)EES(0.99)ENEFY(0.0)IK K:TMT10,t:Phosphorylated T,s:Phosphorylated S MIS18BP1 129996 7 42 54.1 728.39 HUMAN 1 9.5931 -31.0083 PVIPLSDSPPPSRWK-p P30414;S613-p PVIPLSDSPPPSRWK 0.77431577737001 0.446391151333428 0.0396666666666667 0.0743333333333334 2.12592798928909 4.66721873088858 0.0396666666666667 0.0743333333333334 0.61292480995796 0.341411485255555 0.536512555875927 1.04250637187701 P30414 NKTR P30414.S613.p_NKTR P30414_S613s_1_1_613_613 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31818.31818.5 17.01 12.89 1.412 4 1 1 0 736.5832 3597.9148 N604n S613s TMT10 587 (R) ATMAQNENVVVQPVVAEnIPVIPLSDsPPPSR (W) AT(0.0)MAQN(0.0)EN(0.0)VVVQPVVAEN(0.99)IPVIPLS(0.0)DS(0.99)PPPS(0.0)R n:Deamidated,s:Phosphorylated S NKTR 166700.6 34 13 202.1 449.45 HUMAN 1 2.1259 4.6672 PVISKDQSPPPSPPP-p Q9P206-3;S680-p PVISKDQSPPPSPPP 0.178039517852372 0.0269447225862344 -0.21 0.337 14.8152329312396 21.3026735332063 -0.21 0.337 0.0329971709601558 0.00740854028358772 -2.84386925437215 4.16004364494622 Q9P206 KIAA1522 Q9P206.3.S680.p_KIAA1522 Q9P206-3_S680sS684s_2_2_680_684 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13502.13722.3 15.71 15.71 3.19 5 2 2 0 913.4412 2578.3706 S680s S684s TMT10 678 (K) DQsPPPsPPPSYHPPPPPTK (K) DQS(0.99)PPPS(0.99)PPPS(0.0)Y(0.0)HPPPPPT(0.0)K K:TMT10,s:Phosphorylated S KIAA1522 108782.6 2 46 62.1 704.36 HUMAN 1 -14.8152 21.3027 PVISRPKSTPLSQPS-p A0A0U1RRM6;S748-p PVISRPKSTPLSQPS 0.135315375934205 0.562007402958364 -0.270666666666667 0.0636666666666667 17.8160582957232 3.37179637698021 -0.270666666666667 0.0636666666666667 0.016534618174615 0.460066236522546 -3.42513429028775 0.794847819142989 A0A0U1RRM6 NotFound A0A0U1RRM6.S748.p_NotFound A0A0U1RRM6_S748s _1_1_748_748 A0A0U1RRM6 A0A0U1RRM6|Q8N8S7|Q8N8S7-2|Q8N8S7-3 Protein enabled homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19531.19531.3 19.84 19.84 1.279 6 1 1 0 1005.5148 2934.5573 S748s TMT10 748 (K) sTPLSQPSANGVQTEGLDYDRLK (Q) S(0.99)T(0.0)PLS(0.0)QPS(0.0)ANGVQT(0.0)EGLDY(0.0)DRLK K:TMT10,s:Phosphorylated S ENAH 87740.8 4 11 794.2 224.28 HUMAN 1 -17.8161 3.3718 PVISRRDSPRKNQIV-p Q8N8S7;S516-p PVISRRDSPRKNQIV 0.549764101123738 0.00227063010205111 0.0896666666666667 -0.809666666666667 4.7956903054403 40.8908204053386 0.0896666666666667 -0.809666666666667 0.331459880506852 8.14550396590809e-05 1.06648075332021 -10.5393905054533 Q8N8S7 ENAH Q8N8S7.S516.p_ENAH Q8N8S7_S516s_1_1_516_516 Q8N8S7 Q8N8S7 Protein enabled homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8260.8260.4 10.36 7.06 8.155 1 1 1 0 571.8038 2203.246 S516s N520n TMT10 514 (R) RDsPRKnQIVFDNR (S) RDS(1.0)PRKN(0.99)QIVFDN(0.0)R K:TMT10,s:Phosphorylated S,n:Deamidated ENAH 66623.2 3 16 794.1 224.28 HUMAN 1 4.7957 -40.8908 PVIVTEQYPKGLGST-p Q96CN7;Y160-p PVIVTEQYPKGLGST 0.73165537510302 0.0199082106229544 0.062 0.391 2.57558864959957 23.3291785306659 0.062 0.391 0.552638497373087 0.00464603146738612 0.632807830819068 4.62740012688241 Q96CN7 ISOC1 Q96CN7.Y160.p_ISOC1 Q96CN7_Y160y _1_1_160_160 Q96CN7 Q96CN7 Isochorismatase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33985.33985.3 17.72 17.71 5.302 2 1 1 0 703.4101 2028.2509 Y160y TMT10 149 (R) ILGIPVIVTEQyPK (G) ILGIPVIVT(0.0)EQY(0.99)PK K:TMT10,y:Phosphorylated Y ISOC1 32521.4 1 1 5609.1 17.72 HUMAN 1 2.5756 23.3292 PVKEGQPSPADEKGN-p O75351;S93-p PVKEGQPSPADEKGN 0.140218997800079 0.002275314988143 -0.675666666666667 0.806666666666667 17.4581834627261 40.8069457640026 -0.675666666666667 0.806666666666667 0.0179548447276496 8.30434576803616e-05 -3.35343000026399 10.5003396554948 O75351 VPS4B O75351.S93.p_VPS4B O75351_S93s _1_1_93_93 O75351 O75351|K7EKZ3 Vacuolar protein sorting-associated protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7278.7278.4 12.19 7.77 99 1 1 1 0 766.448 2982.7961 S93s TMT10 82 (K) KAQKPVKEGQPsPADEK (G) KAQKPVKEGQPS(1.0)PADEK K:TMT10,s:Phosphorylated S VPS4B 49472.3 2 1 757.1 230.65 HUMAN 1 -17.4582 40.8069 PVKERPVSEMFSLED-p Q15678;S831-p PVKERPVSEMFSLED 0.194002306690035 0.0375879640838752 0.279 0.357 13.890512281069 19.1437249482795 0.279 0.357 0.0408271225012633 0.0121794451852783 2.67283829575163 3.69427697530567 Q15678 PTPN14 Q15678.S831.p_PTPN14 Q15678_S831s _1_1_831_831 Q15678 Q15678 Tyrosine-protein phosphatase non-receptor type 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28812.28812.3 9.78 9.78 4.091 3 1 1 0 782.7109 2266.1587 S831s TMT10 827 (K) ERPVsEMFSLEDSIIER (E) ERPVS(0.99)EMFS(0.0)LEDS(0.0)IIER s:Phosphorylated S PTPN14 136114.4 2 16 337.1 355.06 HUMAN 1 13.8905 19.1437 PVKESDQTLAALLSP-p P18583-5;T1691-p PVKESDQTLAALLSP 0.2691739053465 0.149192631213482 0.216666666666667 -0.243333333333333 10.8084500581302 10.8760045040438 0.216666666666667 -0.243333333333333 0.0830146983572656 0.0817333970325141 2.12258417370866 -2.13345087260907 P18583 SON P18583.5.T1691.p_SON P18583-5_T1691t _1_1_1691_1691 P18583-5 P18583-9|P18583-5|P18583-7 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29242.29242.5 7.33 7.33 7.329 8 1 1 0 1189.0359 5861.2044 T1691t TMT10 1663 (K) DIHLDLPSNNNLVSKDTEEPLPVKESDQtLAALLSPKESSGGEK (E) DIHLDLPS(0.0)NNNLVS(0.0)KDT(0.0)EEPLPVKES(0.0)DQT(0.99)LAALLS(0.0)PKES(0.0)S(0.0)GGEK K:TMT10,t:Phosphorylated T SON 267429.6 3 23 45.1 778.56 HUMAN 1 10.8085 -10.876 PVKGPQGSPLLSRAA-p Q8TEP8-3;S2110-p PVKGPQGSPLLSRAA 0.994167574639875 0.664284649691318 0.00133333333333333 0.0513333333333334 0.0501058162375303 2.43209107388312 0.00133333333333333 0.0513333333333334 0.988529008766123 0.57120354305266 0.0150534120722469 0.60242356097594 Q8TEP8 NotFound Q8TEP8.3.S2110.p_NotFound Q8TEP8-3_S2110s _1_1_2110_2110 Q8TEP8-3 Q8TEP8-3|A0A0A0MR42 Isoform 3 of Centrosomal protein of 192 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21421.21421.4 21.08 21.08 2.23 3 1 1 0 717.1508 2785.6089 S2110s TMT10 2093 (K) HGGNVSLDVLPVKGPQGsPLLSR (A) HGGNVS(0.0)LDVLPVKGPQGS(0.99)PLLS(0.0)R K:TMT10,s:Phosphorylated S CEP192 281787.5 5 18 491.1 293.99 HUMAN 1 0.0501 2.4321 PVKLFARSTAVTTSS-p Q9UKM9-2;S154-p PVKLFARSTAVTTSS 0.820248239494459 0.750848351930775 -0.0633333333333333 0.0366666666666667 1.65858044350633 1.72038589466084 -0.0633333333333334 0.0366666666666667 0.682561763207814 0.672916861243882 -0.431790624996338 0.445899561888808 Q9UKM9 RALY Q9UKM9.2.S154.p_RALY Q9UKM9-2_S154s _1_1_154_154 Q9UKM9-2 Q9UKM9|Q9UKM9-2 Isoform 1 of RNA-binding protein Raly HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7331.7331.2 13.8 13.8 2.155 6 1 1 0 745.8968 1410.8204 S154s TMT10 154 (R) sTAVTTSSAK (I) S(0.99)T(0.0)AVT(0.0)T(0.0)S(0.0)S(0.0)AK K:TMT10,s:Phosphorylated S RALY 30420.5 1 8 967.1 193.88 HUMAN 1 -1.6586 1.7204 PVKLVHDSLEDLQMT-p Q9H7F0;S817-p PVKLVHDSLEDLQMT 0.0838766483900984 0.10828541766957 -0.351333333333333 -0.179333333333333 23.010970289175 12.7559099956237 -0.351333333333333 -0.179333333333333 0.00499922831070507 0.0530162493797134 -4.55702122098366 -2.46585218560609 Q9H7F0 ATP13A3 Q9H7F0.S817.p_ATP13A3 Q9H7F0_S817s _1_1_817_817 Q9H7F0 Q9H7F0|Q9H7F0-2|A0A087WYY3 Probable cation-transporting ATPase 13A3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17943.18147.3 19.08 19.08 8.487 2 1 1 0 622.6398 1785.9367 S817s TMT10 813 (K) LVHDsLEDLQMTR (Y) LVHDS(0.99)LEDLQMT(0.0)R s:Phosphorylated S ATP13A3 139866.1 11 4 2758.1 71.6 HUMAN 1 -23.011 -12.7559 PVKPLSRSAELEFPL-p Q8WYQ5;S385-p PVKPLSRSAELEFPL 0.613648628647483 0.159061285040539 0.083 0.150333333333333 3.93389232447053 10.505135102308 0.083 0.150333333333333 0.404213456703131 0.0890197744902061 0.904471812029008 2.06873821515895 Q8WYQ5 DGCR8 Q8WYQ5.S385.p_DGCR8 Q8WYQ5_S385s _1_1_385_385 Q8WYQ5 Q8WYQ5|Q8WYQ5-3 Microprocessor complex subunit DGCR8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29943.29943.4 17.45 16.01 2.008 2 1 1 0 1139.8057 4476.2169 S385s Hydrogen 385 (R) sAELEFPLDEPDSMGADPGPPDEKDPLGAEAAPGALGQVK (A) S(0.99)AELEFPLDEPDS(0.0)MGADPGPPDEKDPLGAEAAPGALGQVK K:TMT10-Lys-Only,s:Phosphorylated S DGCR8 86842.3 1 7 1117.1 175.44 HUMAN 1 3.9339 10.5051 PVKQFLISPPASPPV-p Q9UKA8;S148-p PVKQFLISPPASPPV 0.232360077075551 0.223570289433502 0.254 -0.359333333333333 12.187483861171 8.57000081100074 0.254 -0.359333333333333 0.0604298635869756 0.138995237165387 2.36563378355358 -1.73333570986516 Q9UKA8 RCAN3 Q9UKA8.S148.p_RCAN3 Q9UKA8_S148sS152s_2_2_148_152 Q9UKA8 Q9UKA8|Q9UKA8-2|Q9UKA8-5|Q9UKA8-6 Calcipressin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.37791.37791.4 15.91 11.43 1.997 5 2 2 0 1090.5417 4216.2227 Q144q S148s S152s Hydrogen 144 (K) qFLIsPPAsPPVGWKQSEDAMPVINYDLLCAVSK (L) Q(1.0)FLIS(0.99)PPAS(0.99)PPVGWKQS(0.0)EDAMPVINY(0.0)DLLCAVS(0.0)K K:TMT10-Lys-Only,C:Carbamidomethylation,q:Pyroglutamic acid,s:Phosphorylated S RCAN3 27776.5 14 5 2472.2 81.93 HUMAN 1 12.1875 -8.57 PVKSPPLSPVGTTPV-p Q9BVC5;S193-p PVKSPPLSPVGTTPV 0.0393571829548896 0.0082587164319471 -0.689666666666667 -0.545 31.6719714472956 29.6317507944003 -0.689666666666667 -0.545 0.000680460398668973 0.00108849119563762 -6.95740065753388 -6.3110186233534 Q9BVC5 C2orf49 Q9BVC5.S193.p_C2orf49 Q9BVC5_S193s _1_1_193_193 Q9BVC5 Q9BVC5|Q9BVC5-2|C9J4K0 Ashwin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17908.17908.2 13.67 5.91 3.073 4 1 1 0 909.512 1738.0515 S193s TMT10 189 (K) SPPLsPVGTTPVK (L) S(0.0)PPLS(0.99)PVGT(0.0)T(0.0)PVK K:TMT10,s:Phosphorylated S C2orf49 25915 4 5 1142.1 173.17 HUMAN 1 -31.672 -29.6318 PVKTKFGYHIIMVEG-p Q9Y237-2;Y147-p PVKTKFGYHIIMVEG 0.445414533569554 0.435754714589015 0.125333333333333 0.155666666666667 6.47556500176859 4.80659290645696 0.125333333333333 0.155666666666667 0.225135250468932 0.330628821689913 1.36886379260332 1.06828420029561 Q9Y237 PIN4 Q9Y237.2.Y147.p_PIN4 Q9Y237-2_Y147y _1_1_147_147 Q9Y237-2 Q9Y237-2 Isoform 2 of Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.22813.22813.3 17.53 17.53 99 1 1 1 0 544.2725 1550.8351 Y147y TMT10 145 (K) FGyHIIMVEGR (K) FGY(1.0)HIIMVEGR y:Phosphorylated Y PIN4 16665.1 2 2 91.1 29.78 HUMAN 1 6.4756 4.8066 PVKTKTVSSSNGGES-p Q8WW12;S37-p PVKTKTVSSSNGGES 0.146674740935683 0.414820742064228 0.258666666666667 0.166333333333333 16.9474291078687 5.08351324670609 0.258666666666667 0.166333333333333 0.0201956152930952 0.310204915483462 3.25228766943522 1.11911114964965 Q8WW12 PCNP Q8WW12.S37.p_PCNP Q8WW12_S37s _1_1_37_37 Q8WW12 Q8WW12|Q8WW12-2 PEST proteolytic signal-containing nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4112.4112.2 9.37 3.25 1.115 7 1 1 0 782.3455 1483.7186 S37s TMT10 35 (K) TVsSSNGGESSSR (S) T(0.0)VS(0.99)S(0.0)S(0.0)NGGES(0.0)S(0.0)S(0.0)R s:Phosphorylated S PCNP 18924.5 1 1 1455.1 140.6 HUMAN 1 16.9474 5.0835 PVLDLHMSLEELYTQ-p F5H1U9;S899-p PVLDLHMSLEELYTQ 0.256885189355668 0.0840158625645521 -0.221 0.193 11.2114029116233 14.2411838101248 -0.221 0.193 0.0756588453004087 0.0376601130168875 -2.19318749996928 2.73563327172717 F5H1U9 NotFound F5H1U9.S899.p_NotFound F5H1U9_S899s _1_1_899_899 F5H1U9 F5H1U9 Multiple PDZ domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.34761.34761.4 20.27 20.27 4.788 4 1 1 0 914.1884 3573.7767 S899s TMT10 884 (K) DVIENSCDPVLDLHMsLEELYTQNLLQR (Q) DVIENS(0.0)CDPVLDLHMS(0.99)LEELY(0.0)T(0.0)QNLLQR C:Carbamidomethylation,s:Phosphorylated S MPDZ 224434.7 1 4 1525.1 134.07 HUMAN 1 -11.2114 14.2412 PVLEPKDSPFLAEHK-p Q8ND30;S414-p PVLEPKDSPFLAEHK 0.950466896477293 0.189833048264435 0.0103333333333333 0.178333333333333 0.436150643338912 9.49067426536708 0.0103333333333333 0.178333333333333 0.90445077590022 0.112443038659441 0.125775343463095 1.89262018507559 Q8ND30 PPFIBP2 Q8ND30.S414.p_PPFIBP2 Q8ND30_S414s _1_1_414_414 Q8ND30 Q8ND30|Q8ND30-2|Q8ND30-3|E9PP16 Liprin-beta-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25500.25500.5 21.13 21.13 5.876 3 1 1 0 882.6626 4329.3222 S414s TMT10 399 (K) CMDGNQPFPVLEPKDsPFLAEHKYPTLPGK (L) CMDGNQPFPVLEPKDS(0.99)PFLAEHKY(0.0)PT(0.0)LPGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PPFIBP2 99112.4 1 4 1287.1 158.1 HUMAN 1 0.4362 9.4907 PVLKNAISLPTIGGS-p Q9UKI2;S108-p PVLKNAISLPTIGGS 0.039271926938295 0.023345939998049 -0.586 0.384666666666667 31.8159595442901 22.2668758473417 -0.586 0.384666666666667 0.00065826997357584 0.00593352006413609 -7.00423342652834 4.37852252557485 Q9UKI2 CDC42EP3 Q9UKI2.S108.p_CDC42EP3 Q9UKI2_S108s _1_1_108_108 Q9UKI2 Q9UKI2 Cdc42 effector protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.37226.37226.3 20.44 20.44 1.149 6 1 1 0 1103.2753 3227.8478 S108s TMT10 105 (K) NAIsLPTIGGSQALMLPLLSPVTFNSK (Q) NAIS(0.99)LPT(0.0)IGGS(0.0)QALMLPLLS(0.0)PVT(0.0)FNS(0.0)K K:TMT10,s:Phosphorylated S CDC42EP3 27791.7 9 3 3719.1 44.61 HUMAN 1 -31.816 22.2669 PVLRLVLSGEKKEQE-p A0A0U1RQK7;S429-p PVLRLVLSGEKKEQE 0.765837080573284 0.00228267556193667 0.0886666666666666 1.18866666666667 2.22588088627076 40.7745811054229 0.0886666666666666 1.18866666666667 0.598979434356502 8.36646289779541e-05 0.558263603493057 10.4853067265621 A0A0U1RQK7 NotFound A0A0U1RQK7.S429.p_NotFound A0A0U1RQK7_S429s _1_1_429_429 A0A0U1RQK7 A0A0U1RQK7|A0A0A0MSA7|O43432-3 Eukaryotic translation initiation factor 4 gamma 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15165.15165.3 9.46 4.4 99 1 1 1 0 547.6702 1561.0292 S429s TMT10 426 (R) LVLsGEKK (E) LVLS(1.0)GEKK K:TMT10,s:Phosphorylated S EIF4G3 196410.6 1 2 857.1 210.84 HUMAN 1 2.2259 40.7746 PVLSGGISPCIIIET-p O96020;S67-p PVLSGGISPCIIIET 0.176872821059086 0.00228267556193667 -0.227333333333333 -0.741 14.9174666196975 40.7731559966556 -0.227333333333333 -0.741 0.0322294829311545 8.36920874803865e-05 -2.8629862535183 -10.4846452384529 O96020 CCNE2 O96020.S67.p_CCNE2 O96020_S67s _1_1_67_67 O96020 O96020|Q8WUE3|O96020-2 G1/S-specific cyclin-E2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.31177.31177.3 18.93 18.93 3.428 3 1 1 0 1005.185 2933.5782 S67s TMT10 56 (R) NCWPPVLSGGIsPCIIIETPHK (E) NCWPPVLS(0.0)GGIS(0.99)PCIIIET(0.0)PHK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCNE2 47327 4 2 1638.1 124.86 HUMAN 1 -14.9175 -40.7732 PVLSHQKSQPSPVTV-p Q96AY4;S2224-p PVLSHQKSQPSPVTV 0.840584079986563 0.403078841221398 -0.0536666666666667 0.082 1.45749111119864 5.24901295852552 -0.0536666666666668 0.082 0.71490920484543 0.298606119796167 -0.385000851401379 1.14925926676185 Q96AY4 TTC28 Q96AY4.S2224.p_TTC28 Q96AY4_S2224s _1_1_2224_2224 Q96AY4 Q96AY4|A0A087WW06 Tetratricopeptide repeat protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10293.10293.4 16.38 16.38 3.768 3 1 1 0 589.8493 2276.4057 S2224s TMT10 2224 (K) sQPSPVTVKPKPPAR (S) S(0.99)QPS(0.0)PVT(0.0)VKPKPPAR K:TMT10,s:Phosphorylated S TTC28 272819.5 2 7 1011.1 188.93 HUMAN 1 -1.4575 5.249 PVMARLPSPTVARSA-p O95425-3;S742-p PVMARLPSPTVARSA 0.612600673271591 0.363033799858537 0.087 0.102 3.94570711085514 5.83495739585085 0.087 0.102 0.403115306554467 0.26091813188735 0.90673716581811 1.2548153980605 O95425 SVIL O95425.3.S742.p_SVIL O95425-3_S742s _1_1_742_742 O95425-3 O95425|O95425-3 Isoform SV3 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13041.13041.2 7.65 1.65 1.332 2 1 1 0 575.3159 1069.6567 S742s TMT10 740 (R) LPsPTVAR (S) LPS(0.99)PT(0.0)VAR s:Phosphorylated S SVIL 246500.4 1 24 406.1 324.74 HUMAN 1 3.9457 5.835 PVNRRTTTPPDSGVL-p Q9NS56;T205-p PVNRRTTTPPDSGVL 0.630558105709775 0.317612360801361 -0.0643333333333333 0.105333333333333 3.7256860961199 6.58420096871895 -0.0643333333333334 0.105333333333333 0.424063985214871 0.219573489152228 -0.864317111479493 1.38765409537604 Q9NS56 TOPORS Q9NS56.T205.p_TOPORS Q9NS56_T205t _1_1_205_205 Q9NS56 Q9NS56|Q9NS56-2 E3 ubiquitin-protein ligase Topors HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25892.25892.3 16.44 13.95 1.109 6 1 1 0 837.4343 2430.319 T205t TMT10 203 (R) TTtPPDSGVLFEGLGISTRPR (D) T(0.0)T(0.0)T(0.99)PPDS(0.0)GVLFEGLGIS(0.0)T(0.0)RPR t:Phosphorylated T TOPORS 120222.5 5 5 580.1 266.48 HUMAN 1 -3.7257 6.5842 PVNTVMDSPVHLEPS-p Q6UB98-2;S1378-p PVNTVMDSPVHLEPS 0.196118186269375 0.99148781840089 0.204 0.00133333333333335 13.7815468204055 0.0546932049233235 0.204 0.00133333333333337 0.0418644430576686 0.987485391400811 2.65289702908033 0.0164215957169769 Q6UB98 ANKRD12 Q6UB98.2.S1378.p_ANKRD12 Q6UB98-2_S1378s _1_1_1378_1378 Q6UB98-2 Q6UB98|Q6UB98-2 Isoform 2 of Ankyrin repeat domain-containing protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21733.21733.3 23.64 23.64 2.53 5 1 1 0 1133.9167 3319.772 S1378s TMT10 1368 (K) NTAPVNTVMDsPVHLEPSSQVGVIQNK (S) NT(0.0)APVNT(0.0)VMDS(0.99)PVHLEPS(0.0)S(0.0)QVGVIQNK K:TMT10,s:Phosphorylated S ANKRD12 234548.2 3 12 480.1 298.87 HUMAN 1 13.7815 0.0547 PVPCPPPSPGPSAVP-p O95817;S377-p PVPCPPPSPGPSAVP 0.145530133715459 0.530287598905066 -0.354 -0.0783333333333333 17.0568645001929 3.7044195263705 -0.354 -0.0783333333333333 0.0196930756841991 0.42614563797315 -3.27384315681765 -0.860051992721059 O95817 BAG3 O95817.S377.p_BAG3 O95817_S377s _1_1_377_377 O95817 O95817 BAG family molecular chaperone regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22337.22337.3 16.93 16.93 2.254 4 1 1 0 1147.9653 3361.9161 S377s TMT10 362 (K) VEVKVPPAPVPCPPPsPGPSAVPSSPK (S) VEVKVPPAPVPCPPPS(0.99)PGPS(0.0)AVPS(0.0)S(0.0)PK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BAG3 61764.7 6 12 416.1 321.05 HUMAN 1 -17.0569 -3.7044 PVPELRDSSKLHDSL-p Q9H1A4;S563-p PVPELRDSSKLHDSL 0.178039517852372 0.00319556274031381 -0.606666666666667 -1.20266666666667 14.8155371459323 37.4446280284502 -0.606666666666667 -1.20266666666667 0.0329948596545619 0.000180109739113314 -2.84392607637924 -9.03930139658608 Q9H1A4 ANAPC1 Q9H1A4.S563.p_ANAPC1 Q9H1A4_S563s _1_1_563_563 Q9H1A4 Q9H1A4 Anaphase-promoting complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36445.36445.3 22.05 22.05 1.243 4 1 1 0 968.8738 2824.6436 S563s TMT10 544 (K) LLGSLDEVVLLSPVPELRDsSK (L) LLGS(0.0)LDEVVLLS(0.0)PVPELRDS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S ANAPC1 218664.2 1 10 460.1 305.66 HUMAN 1 -14.8155 -37.4446 PVPERRGSLTLTISG-p Q6ZRV2;S936-p PVPERRGSLTLTISG 0.859748367936021 0.10016820010431 0.0256666666666667 0.189333333333333 1.28167345051101 13.2040454753059 0.0256666666666667 0.189333333333333 0.744445064429954 0.0478184453533869 0.343113641492429 2.54647720789205 Q6ZRV2 FAM83H Q6ZRV2.S936.p_FAM83H Q6ZRV2_S936s _1_1_936_936 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14069.14069.2 16.67 16.67 2.128 5 1 1 0 877.9655 1674.9588 S936s Hydrogen 934 (R) RGsLTLTISGESPK (A) RGS(0.99)LT(0.0)LT(0.0)IS(0.0)GES(0.0)PK K:TMT10-Lys-Only,s:Phosphorylated S FAM83H 127633.5 61 24 7.1 1347.23 HUMAN 1 1.2817 13.204 PVPERRSSPVPPVPE-p Q6ZRV2;S925-p PVPERRSSPVPPVPE 0.832987870919974 0.983109094265833 0.0393333333333333 0.00266666666666671 1.53167713081124 0.108277327790718 0.0393333333333334 0.0026666666666667 0.702800864304401 0.975376453755773 0.40239571353245 0.0323158128325271 Q6ZRV2 FAM83H Q6ZRV2.S925.p_FAM83H Q6ZRV2_S925s _1_1_925_925 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4567.4567.3 16.08 16.08 1.223 2 1 1 0 486.2529 1376.7757 S925s Hydrogen 923 (R) RSsPVPPVPERR (G) RS(0.0)S(0.99)PVPPVPERR s:Phosphorylated S FAM83H 127633.5 17 23 7.1 1347.23 HUMAN 1 1.5317 0.1083 PVPETTPTPPTKTGT-p O15234;T443-p PVPETTPTPPTKTGT 0.978861898187294 0.197603942344958 -0.00466666666666668 0.175333333333333 0.183542885860706 9.26611849552267 -0.00466666666666668 0.175333333333333 0.958618291188331 0.118409937108745 -0.0543345494646916 1.8537510018117 O15234 CASC3 O15234.T443.p_CASC3 O15234_T443t _1_1_443_443 O15234 O15234 Protein CASC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31464.31670.4 21.81 20.98 2.089 4 1 1 0 853.2125 3329.8649 T443t TMT10 420 (K) LAEEVPPPPEGLIPAPPVPETTPtPPTK (T) LAEEVPPPPEGLIPAPPVPET(0.0)T(0.0)PT(0.99)PPT(0.0)K K:TMT10,t:Phosphorylated T CASC3 76390.7 2 9 323.1 362.08 HUMAN 1 -0.1835 9.2661 PVPGEPVTPPSKAGR-p Q5T011;T2434-p PVPGEPVTPPSKAGR 0.296171875057376 0.0231879799180866 -0.157333333333333 -0.330333333333333 9.95167515072263 22.3155484443648 -0.157333333333333 -0.330333333333333 0.101118934539188 0.00586739269168795 -1.97331597793179 -4.38973450836327 Q5T011 SZT2 Q5T011.T2434.p_SZT2 Q5T011_T2434t _1_1_2434_2434 Q5T011 Q5T011|Q5T011-5 KICSTOR complex protein SZT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22214.22416.3 17.71 17.71 5.074 4 1 1 0 805.4326 2334.311 T2434t TMT10 2420 (R) ASTFPPAPVPGEPVtPPSK (A) AS(0.0)T(0.0)FPPAPVPGEPVT(0.99)PPS(0.0)K K:TMT10,t:Phosphorylated T SZT2 382015.9 3 11 964.1 193.97 HUMAN 1 -9.9517 -22.3155 PVPGTPDSLSSGSSR-p Q9UJZ1;S330-p PVPGTPDSLSSGSSR 0.301386625919454 0.232303874167404 0.158 0.120333333333333 9.7749006850423 8.35041292601441 0.158 0.120333333333333 0.105319777150115 0.146203815765685 1.94262822400646 1.69533757982387 Q9UJZ1 STOML2 Q9UJZ1.S330.p_STOML2 Q9UJZ1_S330s _1_1_330_330 Q9UJZ1 Q9UJZ1|Q9UJZ1-2|A0A087WYB4 Stomatin-like protein 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12555.12555.3 10.19 10.19 1.572 6 1 1 0 608.6297 1743.9075 S330s TMT10 322 (K) APVPGTPDsLSSGSSR (D) APVPGT(0.0)PDS(0.99)LS(0.0)S(0.0)GS(0.0)S(0.0)R s:Phosphorylated S STOML2 38647.5 7 3 3350.1 53.17 HUMAN 1 9.7749 8.3504 PVPGVDRSPFAKSLG-p Q641Q2;S1114-p PVPGVDRSPFAKSLG 0.543328167061294 0.00413791477536262 -0.0903333333333333 -0.760333333333333 4.89043035095878 35.0985450245171 -0.0903333333333334 -0.760333333333333 0.324307479489966 0.000309133091823533 -1.08394011704342 -8.13056233997465 Q641Q2 FAM21A Q641Q2.S1114.p_FAM21A Q641Q2_S1114s _1_1_1114_1114 Q641Q2 Q641Q2|Q641Q2-2|E7ESD2|F8W7U3|A0A087WYF6 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28614.28614.3 26.57 24.38 20.002 4 1 1 0 1283.9594 3769.9074 S1114s TMT10 1085 (R) AASGEDSTEEALAAAAAPWEGGPVPGVDRsPFAK (S) AAS(0.0)GEDS(0.0)T(0.0)EEALAAAAAPWEGGPVPGVDRS(0.99)PFAK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 3 59 12.1 1178.3 HUMAN 1 -4.8904 -35.0985 PVPKEEPSPATKFQS-p Q9Y2H0;S683-p PVPKEEPSPATKFQS 0.194002306690035 0.0090396054976354 -0.261333333333333 -0.428666666666667 13.894366386851 28.9165053008338 -0.261333333333333 -0.428666666666667 0.0407909069250145 0.0012833628691179 -2.67354440177492 -6.09991062705419 Q9Y2H0 DLGAP4 Q9Y2H0.S683.p_DLGAP4 Q9Y2H0_S683s _1_1_683_683 Q9Y2H0 Q9Y2H0|Q9Y2H0-3 Disks large-associated protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25175.25175.5 16.72 16.09 2.349 4 1 1 0 672.9675 3280.843 S683s TMT10 664 (K) LSSIGIQVDCIQPVPKEEPsPATK (F) LS(0.0)S(0.0)IGIQVDCIQPVPKEEPS(0.99)PAT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DLGAP4 108980 2 3 298.1 378.69 HUMAN 1 -13.8944 -28.9165 PVPKLQGSPTPTSKK-p Q8WXD9;S1242-p PVPKLQGSPTPTSKK 0.797447525031717 0.0347566948923959 -0.039 -0.327 1.89698636053512 19.6486764802631 -0.039 -0.327 0.646102414402613 0.0108425729291023 -0.48586611738365 -3.80047814370445 Q8WXD9 CASKIN1 Q8WXD9.S1242.p_CASKIN1 Q8WXD9_S1242s _1_1_1242_1242 Q8WXD9 Q8WXD9 Caskin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9939.9939.2 12.75 12.75 1.301 4 1 1 0 777.421 1473.8677 S1242s TMT10 1239 (K) LQGsPTPTSK (K) LQGS(0.99)PT(0.0)PT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CASKIN1 150381.5 4 7 1881.1 109.29 HUMAN 1 -1.897 -19.6487 PVPLNCPSPVPPLYL-p Q9NYA4;S1002-p PVPLNCPSPVPPLYL 0.182003668118224 0.0194907420703019 -0.293333333333333 -0.325 14.5634002563714 23.4810366463638 -0.293333333333333 -0.325 0.0349671288900796 0.00448638288696325 -2.79696053044613 -4.66370850567715 Q9NYA4 MTMR4 Q9NYA4.S1002.p_MTMR4 Q9NYA4_S1002s _1_1_1002_1002 Q9NYA4 Q9NYA4|J3QR65 Myotubularin-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31425.31425.4 18.15 18.15 6.461 6 1 1 0 1135.0859 4457.3579 S1002s TMT10 989 (K) QVSSTKPVPLNCPsPVPPLYLDDDGLPFPTDVIQHR (L) QVS(0.0)S(0.0)T(0.0)KPVPLNCPS(0.99)PVPPLY(0.0)LDDDGLPFPT(0.0)DVIQHR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MTMR4 136374.8 3 7 1690.1 120.8 HUMAN 1 -14.5634 -23.481 PVPNMTPSGVGRERH-p Q6P996;S416-p PVPNMTPSGVGRERH 0.078742300383136 0.0160029317196039 -0.350666666666667 -0.434 23.5585953283638 24.8070437236981 -0.350666666666667 -0.434 0.00440697378559079 0.00330594502709699 -4.68773442662384 -4.98890807131367 Q6P996 PDXDC1 Q6P996.S416.p_PDXDC1 Q6P996_S416s _1_1_416_416 Q6P996 H3BND4|Q6P996|Q6P996-5|Q6P996-4|Q6P996-3 Pyridoxal-dependent decarboxylase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19046.19046.3 7.64 7.64 1.142 2 1 1 0 564.2899 1610.8886 S416s TMT10 407 (K) AVPVPNMTPsGVGR (E) AVPVPNMT(0.0)PS(0.99)GVGR s:Phosphorylated S PDXDC1 87618.2 1 7 600.1 263.32 HUMAN 1 -23.5586 -24.807 PVPPAAGS_______-p O43818;S475-p PVPPAAGS_______ 0.642636606553244 0.887607493896279 0.0716666666666667 -0.016 3.58988066332218 0.72804079801694 0.0716666666666667 -0.016 0.437534127680766 0.845660255853011 0.837875527573915 -0.204177026638526 O43818 RRP9 O43818.S475.p_RRP9 O43818_S475s _1_1_475_475 O43818 O43818 U3 small nucleolar RNA-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16654.16859.2 12.47 12.47 99 1 1 1 0 552.2888 1023.6036 S475s TMT10 467 (R) VPVPPAAGs (-) VPVPPAAGS(1.0) s:Phosphorylated S RRP9 52467.3 2 1 3279.1 55.18 HUMAN 1 3.5899 -0.728 PVPPETPSDSDHKKK-p J3KR33;S211-p PVPPETPSDSDHKKK 0.317672635624875 0.72301479248177 0.153666666666667 0.0363333333333333 9.32800224320889 1.93861862963823 0.153666666666667 0.0363333333333333 0.116734647353665 0.639938349764962 1.86515786926898 0.495108534038541 J3KR33 NotFound J3KR33.S211.p_NotFound J3KR33_S211s _1_1_211_211 J3KR33 J3KR33|A0JLT2 Mediator of RNA polymerase II transcription subunit 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8631.8845.4 17.44 17.44 1.197 4 1 1 0 662.0923 2565.3764 S211s TMT10 201 (R) TQDPVPPETPsDSDHKK (K) T(0.0)QDPVPPET(0.0)PS(0.99)DS(0.0)DHKK K:TMT10,s:Phosphorylated S MED19 28141.6 2 2 3453.1 50.6 HUMAN 1 9.328 1.9386 PVPPGAPSPDKDPAK-p Q15911;S3409-p PVPPGAPSPDKDPAK 0.2831089969522 0.697876726532471 -0.213666666666667 -0.0393333333333333 10.3611711984388 2.14798654804006 -0.213666666666667 -0.0393333333333333 0.0920201379846798 0.609819552868166 -2.04453408503946 -0.541266317935156 Q15911 ZFHX3 Q15911.S3409.p_ZFHX3 Q15911_S3409s _1_1_3409_3409 Q15911 Q15911|Q15911-2 Zinc finger homeobox protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12954.12954.4 13.57 13.57 4.449 3 1 1 0 657.6072 2547.4386 S3409s TMT10 3398 (K) ASQTPVPPGAPsPDKDPAK (E) AS(0.0)QT(0.0)PVPPGAPS(0.99)PDKDPAK K:TMT10,s:Phosphorylated S ZFHX3 409090.1 3 15 529.1 281.73 HUMAN 1 -10.3612 -2.148 PVPQEEHSDPEMTEE-p Q8TF01;S321-p PVPQEEHSDPEMTEE 0.0386603595331013 0.847816730076972 -0.788666666666667 0.0433333333333333 32.1327284321846 1.00647981874203 -0.788666666666667 0.0433333333333333 0.000611965806639182 0.793143954177046 -7.10818588553548 0.275475876162277 Q8TF01 PNISR Q8TF01.S321.p_PNISR Q8TF01_S311sS313sS321s_3_3_311_321 Q8TF01 Q8TF01|Q8TF01-2 Arginine/serine-rich protein PNISR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12925.12925.3 14.27 14.27 4.401 4 3 3 0 994.0724 2740.3024 S311s S313s S321s TMT10 311 (R) sPsPVPQEEHsDPEMTEEEK (E) S(0.99)PS(0.99)PVPQEEHS(0.99)DPEMT(0.0)EEEK K:TMT10,s:Phosphorylated S PNISR 92575.2 8 13 613.1 261.5 HUMAN 1 -32.1327 1.0065 PVPQQAPSPQAAPQP-p Q9BYJ9;S291-p PVPQQAPSPQAAPQP 0.293673344017078 0.15044604672958 0.318666666666667 -0.163666666666667 10.0422595446629 10.821452576782 0.318666666666667 -0.163666666666667 0.0990316569538282 0.0827665289721909 1.98905335727973 -2.12391819545727 Q9BYJ9 YTHDF1 Q9BYJ9.S291.p_YTHDF1 Q9BYJ9_S291s _1_1_291_291 Q9BYJ9 Q9BYJ9|Q9BYJ9-2 YTH domain-containing family protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22403.22403.5 26.91 24.59 6.914 4 1 1 0 1014.1246 4986.6176 S291s TMT10 283 (K) APVPQQAPsPQAAPQPQQVAQPLPAQPPALAQPQYQSPQQPPQTR (W) APVPQQAPS(0.99)PQAAPQPQQVAQPLPAQPPALAQPQY(0.0)QS(0.0)PQQPPQT(0.0)R s:Phosphorylated S YTHDF1 61043.7 3 11 1868.2 109.97 HUMAN 1 10.0423 -10.8215 PVPRPPVSPPAPLPA-p J3KNZ9;S309-p PVPRPPVSPPAPLPA 0.560646744079127 0.0183283519956583 -0.081 0.376 4.6313196441155 23.9096656029592 -0.081 0.376 0.344245312734338 0.00406474625597665 -1.036040430308 4.76720942338215 J3KNZ9 FBRS J3KNZ9.S309.p_FBRS J3KNZ9_S309s _1_1_309_309 J3KNZ9 J3KNZ9 Probable fibrosin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29573.29573.4 8.85 5.79 1.314 3 1 1 0 992.8009 3888.2101 S309s TMT10 297 (K) EPPPPPVPRPPVsPPAPLPATPSLPPPPQPQLQLR (V) EPPPPPVPRPPVS(0.99)PPAPLPAT(0.0)PS(0.0)LPPPPQPQLQLR s:Phosphorylated S FBRS 104109.7 1 3 767.1 229.08 HUMAN 1 -4.6313 23.9097 PVPSRTNSFNSHQPR-p Q9NRM7;S408-p PVPSRTNSFNSHQPR 0.182372527376184 0.895291073044483 -0.266 0.025 14.5345591731237 0.674214189031955 -0.266 0.025 0.0352001150285303 0.8562066194416 -2.79160459792798 0.190017866732353 Q9NRM7 LATS2 Q9NRM7.S408.p_LATS2 Q9NRM7_S408s _1_1_408_408 Q9NRM7 Q9NRM7 Serine/threonine-protein kinase LATS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7457.7457.4 17.53 17.53 1.102 3 1 1 0 565.5421 2179.1773 S408s TMT10 406 (R) TNsFNSHQPRPGPPGK (A) T(0.0)NS(0.99)FNS(0.0)HQPRPGPPGK K:TMT10,s:Phosphorylated S LATS2 121046.5 3 15 824.2 217.64 HUMAN 1 -14.5346 0.6742 PVPTNSPSPPPLPPP-p Q9ULJ3;S983-p PVPTNSPSPPPLPPP 0.396983707912819 0.0816277284164429 -0.118 0.223333333333333 7.40387723029774 14.4243851391343 -0.118 0.223333333333333 0.181807701784641 0.0361045125634577 -1.53154085885386 2.76945226342382 Q9ULJ3 ZBTB21 Q9ULJ3.S983.p_ZBTB21 Q9ULJ3_S981sS983s_2_2_981_983 Q9ULJ3 Q9ULJ3|Q9ULJ3-2 Zinc finger and BTB domain-containing protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28388.28388.3 18.32 7.8 1.129 4 2 2 0 1083.5431 3088.6793 S981s S983s TMT10 971 (K) ESEVCPVPTNsPsPPPLPPPPPLPK (I) ES(0.0)EVCPVPT(0.0)NS(0.99)PS(0.99)PPPLPPPPPLPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZBTB21 120636.9 5 15 692.1 242.92 HUMAN 1 -7.4039 14.4244 PVPTPPRSPAQEEPT-p Q9HB09;S121-p PVPTPPRSPAQEEPT 0.698366744053494 0.899226362092759 0.0896666666666667 -0.016 2.92998778402821 0.646104462639317 0.0896666666666667 -0.016 0.509332303721105 0.861766393369348 0.706155798242861 -0.182571731027933 Q9HB09 BCL2L12 Q9HB09.S121.p_BCL2L12 Q9HB09_S113sT117tS121s_3_3_113_121 Q9HB09 Q9HB09|I6LJZ7|A0A087WSV0|I6LJZ9|M0QZM6|M0R1Z8 Bcl-2-like protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19080.19080.4 9.33 9.33 3.453 5 3 3 0 830.3755 3078.5806 S113s T117t S121s TMT10 107 (R) RGEAAGsPVPtPPRsPAQEEPTDFLSR (L) RGEAAGS(0.99)PVPT(0.99)PPRS(0.99)PAQEEPT(0.0)DFLS(0.0)R s:Phosphorylated S,t:Phosphorylated T BCL2L12 37277.2 2 9 1874.1 109.69 HUMAN 1 2.93 -0.6461 PVPVDPGTPCRLCRT-p Q5JXC2;T258-p PVPVDPGTPCRLCRT 0.13016481000448 0.299565534810207 0.348666666666667 0.149666666666667 18.3116168096305 6.91098126605216 0.348666666666667 0.149666666666667 0.0147515725333657 0.20365818705146 3.52560730312999 1.44502763224347 Q5JXC2 MIIP Q5JXC2.T258.p_MIIP Q5JXC2_T258t _1_1_258_258 Q5JXC2 Q5JXC2|Q5JXC2-2 Migration and invasion-inhibitory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27369.27369.3 13.9 13.9 99 1 1 1 0 588.6315 1683.909 T258t TMT10 249 (R) LFPVPVDPGtPCR (L) LFPVPVDPGT(1.0)PCR C:Carbamidomethylation,t:Phosphorylated T MIIP 43393.9 1 2 3185.1 58.28 HUMAN 1 18.3116 6.911 PVQDRPESSLVFKDT-p Q9UQ35;S1198-p PVQDRPESSLVFKDT 0.294750125885592 0.0227455367954216 -0.249333333333333 1.22666666666667 10.0096577220006 22.433781739029 -0.249333333333333 1.22666666666667 0.0997778698079561 0.00570981222481099 -1.98338838301992 4.41704522248235 Q9UQ35 SRRM2 Q9UQ35.S1198.p_SRRM2 Q9UQ35_S1198s _1_1_1198_1198 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24095.24095.4 18.21 18.21 1.148 3 1 1 0 748.4083 2910.6332 S1198s TMT10 1185 (K) DKFSPFPVQDRPEsSLVFK (D) DKFS(0.0)PFPVQDRPES(0.99)S(0.0)LVFK K:TMT10,s:Phosphorylated S SRRM2 300351.7 4 68 2.1 3310.34 HUMAN 1 -10.0097 22.4338 PVQVAEGSEPDGFWE-p P06396;S636-p PVQVAEGSEPDGFWE 0.58471981560589 0.0887091537993984 0.083 0.191666666666667 4.28576145454507 13.9224403445912 0.083 0.191666666666667 0.372755323504747 0.0405280740109782 0.971374043145107 2.67709427102042 P06396 GSN P06396.S636.p_GSN P06396_S636s _1_1_636_636 P06396 P06396 Gelsolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30151.30151.3 18.14 18.14 99 1 1 1 0 937.4691 2730.4139 S636s TMT10 627 (R) AQPVQVAEGsEPDGFWEALGGK (A) AQPVQVAEGS(1.0)EPDGFWEALGGK K:TMT10,s:Phosphorylated S GSN 86095.3 1 7 1746.1 117.91 HUMAN 1 4.2858 13.9224 PVRAGGASPAASSTA-p Q8IU81;S453-p PVRAGGASPAASSTA 0.373142761047229 0.112680700984798 0.174666666666667 0.174333333333333 7.94058474534834 12.5055735346717 0.174666666666667 0.174333333333333 0.160672490484218 0.0561620105211368 1.62485192465653 2.42107542983968 Q8IU81 IRF2BP1 Q8IU81.S453.p_IRF2BP1 Q8IU81_S453s _1_1_453_453 Q8IU81 Q8IU81 Interferon regulatory factor 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4591.4591.3 24.61 24.61 7.748 5 1 1 0 701.0061 2021.0362 S453s TMT10 449 (R) AGGAsPAASSTAQPPTQHR (L) AGGAS(0.99)PAAS(0.0)S(0.0)T(0.0)AQPPT(0.0)QHR s:Phosphorylated S IRF2BP1 62599.7 7 9 274.1 392.67 HUMAN 1 7.9406 12.5056 PVRAPAPSPAKEERK-p O75781;S124-p PVRAPAPSPAKEERK 0.867299009768445 0.392066904531956 0.0246666666666667 -0.105666666666667 1.20463816552568 5.40581594809523 0.0246666666666667 -0.105666666666667 0.757767864019143 0.288017187515006 0.324450346246123 -1.17767879514866 O75781 PALM O75781.S124.p_PALM O75781_S124s _1_1_124_124 O75781 O75781|O75781-2 Paralemmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8498.8498.3 15.69 15.69 3.88 2 1 1 0 895.1368 2603.4306 S124s TMT10 110 (K) ENAAAPSPVRAPAPsPAKEER (K) ENAAAPS(0.0)PVRAPAPS(0.99)PAKEER K:TMT10,s:Phosphorylated S PALM 42246.4 5 2 1689.1 120.82 HUMAN 1 1.2046 -5.4058 PVREIGQSPSRKIML-p Q6ZV73;S70-p PVREIGQSPSRKIML 0.45060350179761 0.0329413102447167 -0.105333333333333 -0.401666666666667 6.39213935059101 19.9901804421693 -0.105333333333333 -0.401666666666667 0.229501783538729 0.0100226359481928 -1.3541320318133 -3.87322124158722 Q6ZV73 FGD6 Q6ZV73.S70.p_FGD6 Q6ZV73_S70s _1_1_70_70 Q6ZV73 Q6ZV73|Q6ZV73-2|F8VY01 FYVE, RhoGEF and PH domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5742.5742.3 8.23 8.23 8.228 2 1 1 0 513.9488 1459.8633 S70s TMT10 66 (R) EIGQsPSRK (I) EIGQS(0.99)PS(0.0)RK K:TMT10,s:Phosphorylated S FGD6 162696.3 2 1 630.1 257.05 HUMAN 1 -6.3921 -19.9902 PVRIISVTPVKNIDP-p Q29RF7;T1208-p PVRIISVTPVKNIDP 0.213993143458835 0.00259686134026793 0.228333333333333 -1.13866666666667 12.9041398794744 39.4780332688519 0.228333333333333 -1.13866666666667 0.051237273567278 0.000112770803056292 2.49380770726935 -9.89904581586772 Q29RF7 PDS5A Q29RF7.T1208.p_PDS5A Q29RF7_T1208t _1_1_1208_1208 Q29RF7 Q29RF7 Sister chromatid cohesion protein PDS5 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24866.24866.3 17.16 17.16 2.189 2 1 1 0 764.1302 2210.4091 T1208t TMT10 1204 (R) IISVtPVKNIDPVK (N) IIS(0.0)VT(0.99)PVKNIDPVK K:TMT10,t:Phosphorylated T PDS5A 152367.9 9 3 1024.1 187.11 HUMAN 1 12.9041 -39.478 PVRKESKTPPPYSVY-p Q8N1I0-3;T1908-p PVRKESKTPPPYSVY 0.508518592067906 0.124165409708268 -0.0953333333333333 0.191666666666667 5.41999254431727 11.9521631838214 -0.0953333333333334 0.191666666666667 0.287078551039667 0.0637945651746658 -1.18049749944419 2.32269904733786 Q8N1I0 DOCK4 Q8N1I0.3.T1908.p_DOCK4 Q8N1I0-3_T1908t _1_1_1908_1908 Q8N1I0-3 Q8N1I0-3|Q8N1I0-2|Q8N1I0-4 Isoform 3 of Dedicator of cytokinesis protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12063.12063.3 7.31 7.31 1.361 5 1 1 0 697.6918 2011.0901 T1908t TMT10 1905 (K) ESKtPPPYSVYER (T) ES(0.0)KT(0.99)PPPY(0.0)S(0.0)VY(0.0)ER K:TMT10,t:Phosphorylated T DOCK4 228000 1 4 3555.1 48.3 HUMAN 1 -5.42 11.9522 PVRLLGHSPVLRNIT-p P30305;S160-p PVRLLGHSPVLRNIT 0.731724827574726 0.00204559454801398 -0.0523333333333333 -0.978333333333333 2.57272726009208 41.8853148312127 -0.0523333333333333 -0.978333333333333 0.553002728352263 6.47841129900803e-05 -0.632207083604301 -11.0127303063974 P30305 CDC25B P30305.S160.p_CDC25B P30305_S160s _1_1_160_160 P30305 P30305|P30305-2|B4DIG0|G8JLH2 M-phase inducer phosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14780.14780.3 16.5 16.5 99 1 1 1 0 434.2494 1220.7677 S160s TMT10 156 (R) LLGHsPVLR (N) LLGHS(1.0)PVLR s:Phosphorylated S CDC25B 65671 3 5 563.1 271.52 HUMAN 1 -2.5727 -41.8853 PVRMRRNSFTPLSSS-p O60825;S466-p PVRMRRNSFTPLSSS 0.148374825932688 0.00997222848085941 -0.563333333333333 -0.420333333333333 16.7186243570508 28.1186777171685 -0.563333333333333 -0.420333333333333 0.0212881324823531 0.0015421699211317 -3.20741901989308 -5.87098413175088 O60825 PFKFB2 O60825.S466.p_PFKFB2 O60825_S466s _1_1_466_466 O60825 O60825 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10237.10237.2 13.07 13.07 2.352 6 1 1 0 830.3965 1579.8187 S466s Hydrogen 464 (R) RNsFTPLSSSNTIR (R) RNS(0.99)FT(0.0)PLS(0.0)S(0.0)S(0.0)NT(0.0)IR s:Phosphorylated S PFKFB2 58989.2 13 1 2266.1 90.54 HUMAN 1 -16.7186 -28.1187 PVRNRRLTVNEAVKE-p Q15149;T2886-p PVRNRRLTVNEAVKE 0.045879533129693 0.116982584307516 -0.602333333333333 -0.171666666666667 29.7547230702719 12.287894900617 -0.602333333333333 -0.171666666666667 0.00105810238419481 0.0590487230041142 -6.35784325375348 -2.38228330149022 Q15149 PLEC Q15149.T2886.p_PLEC Q15149_T2886t _1_1_2886_2886 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11703.11703.3 8.16 8.16 99 1 1 1 0 523.3041 1487.931 T2886t TMT10 2884 (R) RLtVNEAVK (E) RLT(1.0)VNEAVK K:TMT10,t:Phosphorylated T PLEC 533778 1 23 44.1 794.85 HUMAN 1 -29.7547 -12.2879 PVRPAAASPIVSGAR-p Q9Y2K7;S558-p PVRPAAASPIVSGAR 0.127756114951396 0.0101019318458942 0.309333333333333 0.526666666666667 18.5181837898607 28.0369196621555 0.309333333333333 0.526666666666667 0.0140663565313496 0.00157147701693589 3.56790544825657 5.84790495488844 Q9Y2K7 KDM2A Q9Y2K7.S558.p_KDM2A Q9Y2K7_S558s _1_1_558_558 Q9Y2K7 Q9Y2K7|I3VM54|Q9Y2K7-2|Q9Y2K7-3|Q9Y2K7-5|Q9Y2K7-4 Lysine-specific demethylase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15275.15275.3 15.82 11.92 2.442 3 1 1 0 658.0364 1892.1279 S558s TMT10 549 (R) LTPVRPAAAsPIVSGAR (R) LT(0.0)PVRPAAAS(0.99)PIVS(0.0)GAR s:Phosphorylated S KDM2A 135243.8 4 6 409.1 323.7 HUMAN 1 18.5182 28.0369 PVSASRSSLDLSYYP-p P50402;S176-p PVSASRSSLDLSYYP 0.235621777934373 0.409948751432474 0.270666666666667 0.221333333333333 12.0253099468964 5.15250158293284 0.270666666666667 0.221333333333333 0.0627290925943934 0.305316195248889 2.33682465428777 1.1316980853348 P50402 EMD P50402.S176.p_EMD P50402_S176s _1_1_176_176 P50402 P50402|Q5HY57 Emerin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29583.29583.3 21.96 21.96 1.111 20 1 1 0 1145.5125 3354.5521 S176s TMT10 175 (R) SsLDLSYYPTSSSTSFMSSSSSSSSWLTR (R) S(0.0)S(0.99)LDLS(0.0)Y(0.0)Y(0.0)PT(0.0)S(0.0)S(0.0)S(0.0)T(0.0)S(0.0)FMS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)WLT(0.0)R s:Phosphorylated S EMD 29050.4 2 8 483.1 297.25 HUMAN 1 12.0253 5.1525 PVSEDFKSEPVSPQD-p P48552;S803-p PVSEDFKSEPVSPQD 0.0930623897669081 0.618402803444096 0.390666666666667 0.0486666666666667 21.9265166337108 2.83661618501726 0.390666666666667 0.0486666666666667 0.00641724080890457 0.520401310435018 4.30514573095516 0.68693379205048 P48552 NRIP1 P48552.S803.p_NRIP1 P48552_S803sS807s_2_2_803_807 P48552 P48552 Nuclear receptor-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29531.29531.4 14.44 14.44 2.346 6 2 2 0 886.6897 3383.7978 S803s S807s TMT10 791 (R) SAPALPVSEDFKsEPVsPQDFSFSK (N) S(0.0)APALPVS(0.0)EDFKS(0.99)EPVS(0.99)PQDFS(0.0)FS(0.0)K K:TMT10,s:Phosphorylated S NRIP1 127738.5 1 14 807.1 221.77 HUMAN 1 21.9265 2.8366 PVSERKGSMISVMSS-p P21359;S876-p PVSERKGSMISVMSS 0.231102554294886 0.48166775463794 -0.279666666666667 -0.0979999999999999 12.2298536873049 4.2357594948912 -0.279666666666667 -0.0979999999999999 0.0598431755732806 0.377071796868333 -2.37317179936725 -0.961765392827395 P21359 NF1 P21359.S876.p_NF1 P21359_S876s _1_1_876_876 P21359 P21359|P21359-6|P21359-2|P21359-4 Neurofibromin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19441.19441.3 15.3 15.3 1.198 6 1 1 0 931.4779 2712.4515 S876s TMT10 874 (R) KGsMISVMSSEGNADTPVSK (F) KGS(0.99)MIS(0.0)VMS(0.0)S(0.0)EGNADT(0.0)PVS(0.0)K K:TMT10,s:Phosphorylated S NF1 322961 3 5 437.1 312.53 HUMAN 1 -12.2299 -4.2358 PVSGGECSPPLTVEP-p Q5JRA6;S1678-p PVSGGECSPPLTVEP 0.370635134397296 0.353885455956445 0.120666666666667 0.088 7.99259165483645 5.98267763956269 0.120666666666667 0.0880000000000001 0.15875990651988 0.252192540172215 1.63387542793664 1.28117316208929 Q5JRA6 MIA3 Q5JRA6.S1678.p_MIA3 Q5JRA6_S1678s_1_1_1678_1678 Q5JRA6 Q5JRA6|Q5JRA6-2|Q5JRA6-4 Transport and Golgi organization protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24731.24731.4 25.25 20.23 2.677 8 1 1 0 1082.0468 4244.2084 N1664n S1678s TMT10 1658 (R) RGPLSQnGSFGPSPVSGGECsPPLTVEPPVRPLSATLNR (R) RGPLS(0.0)QN(0.99)GS(0.0)FGPS(0.0)PVS(0.0)GGECS(0.99)PPLT(0.0)VEPPVRPLS(0.0)AT(0.0)LN(0.0)R C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S MIA3 214383.2 33 7 378.1 336.1 HUMAN 1 7.9926 5.9827 PVSLSVQSPAALTAE-p P54198;S661-p PVSLSVQSPAALTAE 0.830914313858331 0.0202467079324035 -0.0316666666666667 0.327666666666667 1.54808647307195 23.1919269378853 -0.0316666666666667 0.329090740695081 0.700150418426731 0.00479520641072489 -0.406221906458069 4.59474423674075 P54198 HIRA P54198.S661.p_HIRA P54198_S661s_1_1_661_661 P54198 P54198 Protein HIRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26111.26111.3 18.53 18.53 4.389 4 1 1 0 799.4357 2300.33 M653m S661s TMT10 652 (R) LmPVSLSVQsPAALTAEK (E) LM(1.0)PVS(0.0)LS(0.0)VQS(0.99)PAALT(0.0)AEK K:TMT10,m:Oxidized methionine,s:Phosphorylated S HIRA 113316.6 4 7 1371.1 149.22 HUMAN 1 -1.5481 23.1919 PVSPGPLSPGGTPGK-p Q8IUW5;S166-p PVSPGPLSPGGTPGK 0.657104547758613 0.636662463126108 0.071 -0.0476666666666667 3.42289309099877 2.66898341856625 0.071 -0.0476666666666667 0.454685066772552 0.540880915654267 0.805072280987595 -0.652252134131546 Q8IUW5 RELL1 Q8IUW5.S166.p_RELL1 Q8IUW5_S166s _1_1_166_166 Q8IUW5 Q8IUW5 RELT-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.26320.26320.5 19.34 11.95 1.129 10 1 1 0 840.6186 4119.0996 S166s TMT10 136 (K) AMVADNSLYDPESPVTPSTPGSPPVSPGPLsPGGTPGK (H) AMVADNS(0.0)LY(0.0)DPES(0.0)PVT(0.0)PS(0.0)T(0.0)PGS(0.0)PPVS(0.0)PGPLS(0.99)PGGT(0.0)PGK K:TMT10,s:Phosphorylated S RELL1 29624.9 2 4 2329.1 87.71 HUMAN 1 3.4229 -2.669 PVSPLTLSPGPEAHQ-p Q6UUV7;S396-p PVSPLTLSPGPEAHQ 0.971690515116565 0.16024729084317 0.00666666666666666 -0.15 0.241389022886783 10.4599744410833 0.00666666666666666 -0.15 0.945934570620508 0.0899502875231046 0.0710176763340883 -2.06087252415538 Q6UUV7 CRTC3 Q6UUV7.S396.p_CRTC3 Q6UUV7_S396s _1_1_396_396 Q6UUV7 Q6UUV7|Q6UUV7-3 CREB-regulated transcription coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15915.15915.4 15.31 15.31 2.184 4 1 1 0 667.5967 2587.3942 S396s TMT10 386 (R) RQPPVSPLTLsPGPEAHQGFSR (Q) RQPPVS(0.0)PLT(0.0)LS(0.99)PGPEAHQGFS(0.0)R s:Phosphorylated S CRTC3 67129.2 2 5 1297.1 156.77 HUMAN 1 0.2414 -10.46 PVSPRPFSSPSMSPS-p Q96S59;S482-p PVSPRPFSSPSMSPS 0.373380145180951 0.041636245514941 0.152333333333333 0.390666666666667 7.92849500294293 18.5042637166274 0.152333333333333 0.390666666666667 0.161120388242706 0.0141115145646377 1.62275390423392 3.56202756613132 Q96S59 RANBP9 Q96S59.S482.p_RANBP9 Q96S59_S477sS482sS483s_3_3_477_483 Q96S59 Q96S59|Q96S59-3|Q96S59-2 Ran-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21046.21046.4 15.07 15.07 1.225 10 3 3 0 1025.2089 3857.9103 S477s S482s S483s TMT10 470 (K) SQDSYPVsPRPFssPSMSPSHGMNIHNLASGK (G) S(0.0)QDS(0.0)Y(0.0)PVS(0.99)PRPFS(0.99)S(0.99)PS(0.0)MS(0.0)PS(0.0)HGMNIHNLAS(0.0)GK K:TMT10,s:Phosphorylated S RANBP9 78701.8 10 5 1268.2 160.1 HUMAN 1 7.9285 18.5043 PVSPVKFSPGDFWGR-p P23443-2;S429-p PVSPVKFSPGDFWGR 0.019376665224519 0.00184815994780058 -1.11266666666667 -0.932 40.271305040223 42.9558458461609 -1.11266666666667 -0.932 9.39440969312948e-05 5.06308729573493e-05 -10.2780347443938 -11.5442169512662 P23443 RPS6KB1 P23443.2.S429.p_RPS6KB1 P23443-2_S429s _1_1_429_429 P23443-2 P23443|P23443-2|P23443-5|P23443-3 Isoform Alpha II of Ribosomal protein S6 kinase beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27866.27866.3 12.15 12.15 3.579 3 1 1 0 772.4031 2235.2326 S429s TMT10 421 (R) TPVSPVKFsPGDFWGR (G) T(0.0)PVS(0.0)PVKFS(0.99)PGDFWGR K:TMT10,s:Phosphorylated S RPS6KB1 56530.6 1 8 1663.1 122.57 HUMAN 1 -40.2713 -42.9558 PVSRGRDSYGGPPRR-p P38159;S189-p PVSRGRDSYGGPPRR 0.536352617148932 0.293138572547836 0.139666666666667 -0.232333333333333 5.00422705836097 7.0353156052875 0.139666666666667 -0.232333333333333 0.315920126162615 0.197910319299328 1.10483268190419 -1.46678632657114 P38159 RBMX P38159.S189.p_RBMX P38159_S189s _1_1_189_189 P38159 P38159|Q96E39|P38159-2|H3BT71 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4426.4426.3 8.69 8.69 6.219 2 1 1 0 457.5517 1290.6752 S189s TMT10 186 (R) GRDsYGGPPR (R) GRDS(0.99)Y(0.0)GGPPR s:Phosphorylated S RBMX 42331.1 1 14 102.1 595.29 HUMAN 1 5.0042 -7.0353 PVSSDSLSTKDFAAV-p Q5JSH3;S199-p PVSSDSLSTKDFAAV 0.755503298606435 0.0114178101702009 -0.074 0.455666666666667 2.32761348809343 27.1871081290115 -0.074 0.455666666666667 0.585111523186593 0.00191112541115103 -0.580191294356671 5.6120803362767 Q5JSH3 WDR44 Q5JSH3.S199.p_WDR44 Q5JSH3_S199s _1_1_199_199 Q5JSH3 Q5JSH3|Q5JSH3-2|Q5JSH3-4 WD repeat-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19171.19171.3 13.54 13.54 1.223 5 1 1 0 729.3727 2106.1331 S199s TMT10 185 (K) GGGDVLEPVSSDSLsTK (D) GGGDVLEPVS(0.0)S(0.0)DS(0.0)LS(0.99)T(0.0)K K:TMT10,s:Phosphorylated S WDR44 101935 1 7 95.1 607.92 HUMAN 1 -2.3276 27.1871 PVSSEPASPLHTIVI-p O43295;S1011-p PVSSEPASPLHTIVI 0.660585362937783 0.832753178142413 -0.0636666666666667 -0.0353333333333333 3.36952570545209 1.11330675524324 -0.0636666666666667 -0.0353333333333333 0.460306841110228 0.773872340418664 -0.794517773938629 -0.302033402495545 O43295 SRGAP3 O43295.S1011.p_SRGAP3 O43295_S1011s _1_1_1011_1011 O43295 O43295|O43295-2 SLIT-ROBO Rho GTPase-activating protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19623.19623.4 16.98 16.98 1.74 4 1 1 0 784.1526 3053.604 S1011s TMT10 1000 (K) NPPGPVSSEPAsPLHTIVIRDPDAAMR (R) NPPGPVS(0.0)S(0.0)EPAS(0.99)PLHT(0.0)IVIRDPDAAMR s:Phosphorylated S SRGAP3 125471.5 1 13 754.1 231.27 HUMAN 1 -3.3695 -1.1133 PVSSPGMSQELRTMT-p P46937-9;S375-p PVSSPGMSQELRTMT 0.52189953420108 0.76713806264453 0.13 -0.037 5.22255234736588 1.59027186111195 0.13 -0.037 0.300431015152203 0.693382400074684 1.14469002420566 -0.415978621322585 P46937 YAP1 P46937.9.S375.p_YAP1 P46937-9_S375s _1_1_375_375 P46937-9 P46937-9|P46937-8|P46937-2|P46937-7|P46937-6 Isoform 9 of Transcriptional coactivator YAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20921.20921.3 18.97 18.97 1.243 6 1 1 0 1022.4872 2985.4785 S375s TMT10 354 (R) SQLPTLEQDGGTQNPVSSPGMsQELR (T) S(0.0)QLPT(0.0)LEQDGGT(0.0)QNPVS(0.0)S(0.0)PGMS(0.99)QELR s:Phosphorylated S YAP1 54998.2 1 16 436.1 313.01 HUMAN 1 5.2226 -1.5903 PVTNFSDSDDTMVAK-p Q9NWQ4;S88-p PVTNFSDSDDTMVAK 0.821244772991101 0.145972593594168 -0.0366666666666667 0.198666666666667 1.6450627390113 11.0092100344774 -0.0366666666666667 0.198666666666667 0.68468959186292 0.0792645496638502 -0.428680502479677 2.15674966190638 Q9NWQ4 GPATCH2L Q9NWQ4.S88.p_GPATCH2L Q9NWQ4_S86sS88s_2_2_86_88 Q9NWQ4 Q9NWQ4|Q9NWQ4-4|G3V553|Q9NWQ4-1 G patch domain-containing protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24053.24053.3 16.72 16.72 2.243 4 2 2 0 848.7202 2384.2056 S86s S88s TMT10 78 (R) EVAPVTNFsDsDDTMVAK (R) EVAPVT(0.0)NFS(0.99)DS(0.99)DDT(0.0)MVAK K:TMT10,s:Phosphorylated S GPATCH2L 55171.4 5 6 2768.1 71.26 HUMAN 1 -1.6451 11.0092 PVTNQPVTPKALTAG-p Q7Z7C8-2;T130-p PVTNQPVTPKALTAG 0.375400137942411 0.450069887922868 -0.148666666666667 0.0723333333333334 7.87096086400036 4.62189692236146 -0.148666666666667 0.0723333333333334 0.163269067983276 0.344993019503571 -1.6127675294003 1.03409365577108 Q7Z7C8 TAF8 Q7Z7C8.2.T130.p_TAF8 Q7Z7C8-2_T130t _1_1_130_130 Q7Z7C8-2 Q7Z7C8-4|Q7Z7C8-2|B4DZU5 Isoform 2 of Transcription initiation factor TFIID subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22546.22546.3 14.24 14.24 3.363 3 1 1 0 744.4133 2151.2612 T130t TMT10 117 (R) MVITAPPVTNQPVtPK (A) MVIT(0.0)APPVT(0.0)NQPVT(0.99)PK K:TMT10,t:Phosphorylated T TAF8 34492 2 1 4102.1 37.63 HUMAN 1 -7.871 4.6219 PVTPQPRSISGPSVG-p Q8NFH5;S53-p PVTPQPRSISGPSVG 0.842855371536824 0.113971102694603 -0.0283333333333333 -0.171666666666667 1.43639011843603 12.4389197965086 -0.0283333333333333 -0.171666666666667 0.718391174187418 0.0570306104623541 -0.380023669266457 -2.40918335383021 Q8NFH5 NUP35 Q8NFH5.S53.p_NUP35 Q8NFH5_S53s _1_1_53_53 Q8NFH5 Q8NFH5|Q8NFH5-2|F8WEL4|F8WCF5 Nucleoporin NUP53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20035.20035.2 13.88 6.48 2.378 3 1 1 0 829.8953 1578.8181 S53s TMT10 53 (R) sISGPSVGVMEMR (S) S(0.99)IS(0.0)GPS(0.0)VGVMEMR s:Phosphorylated S NUP35 34887.3 2 3 627.1 257.69 HUMAN 1 -1.4364 -12.4389 PVTPRFQSPDPYSRP-p O14686-3;S2449-p PVTPRFQSPDPYSRP 0.93306667659969 0.0467334185813735 -0.019 -0.296666666666667 0.591002486278125 17.7973182657011 -0.019 -0.296666666666667 0.872769882793127 0.0166061200577437 -0.167885244690355 -3.41860290410368 O14686 KMT2D O14686.3.S2449.p_KMT2D O14686-3_S2449s _1_1_2449_2449 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7882.7882.4 14.12 6.62 13.828 5 1 1 0 578.5344 2231.1519 S2449s TMT10 2447 (R) FQsPDPYSRPPSRPQSR (D) FQS(0.99)PDPY(0.0)S(0.0)RPPS(0.0)RPQS(0.0)R s:Phosphorylated S KMT2D 600227.3 2 30 17.1 1042.08 HUMAN 1 -0.591 -17.7973 PVTTREPTPRLQEGS-p Q9Y618;T1574-p PVTTREPTPRLQEGS 0.848303400988284 0.840998706659492 -0.0413333333333333 0.0316666666666667 1.38113893212091 1.05672963454615 -0.0413333333333333 0.0316666666666666 0.727588970171565 0.784019810557213 -0.366927857387217 0.288019952302103 Q9Y618 NCOR2 Q9Y618.T1574.p_NCOR2 Q9Y618_T1574t _1_1_1574_1574 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4973.4973.3 10.52 3.5 3.919 4 1 1 0 536.2776 1526.8488 T1574t TMT10 1565 (R) GSPVTTREPtPR (L) GS(0.0)PVT(0.0)T(0.0)REPT(0.99)PR t:Phosphorylated T NCOR2 275540.8 1 26 16.1 1053.89 HUMAN 1 -1.3811 1.0567 PVTVSPTTPTSPTEG-p Q9Y6G9;T513-p PVTVSPTTPTSPTEG 0.975009344981545 0.542254547755275 0.00633333333333333 -0.0586666666666667 0.212731227337032 3.57724546909903 0.00633333333333334 -0.0586666666666667 0.952197150006497 0.43880892592706 0.0627778098773495 -0.835274077915061 Q9Y6G9 DYNC1LI1 Q9Y6G9.T513.p_DYNC1LI1 Q9Y6G9_T513t _1_1_513_513 Q9Y6G9 Q9Y6G9|E9PHI6 Cytoplasmic dynein 1 light intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13813.13813.2 13.63 13.63 1.134 8 1 1 0 1212.6177 2344.2648 T513t TMT10 505 (R) KPVTVSPTtPTSPTEGEAS (-) KPVT(0.0)VS(0.0)PT(0.0)T(0.99)PT(0.0)S(0.0)PT(0.0)EGEAS(0.0) K:TMT10,t:Phosphorylated T DYNC1LI1 56863.4 5 16 510.1 287.75 HUMAN 1 0.2127 -3.5772 PVTYISETDEEDDFM-p P35251;T110-p PVTYISETDEEDDFM 0.131504655206906 0.431902759085041 0.336666666666667 0.179 18.2094137815511 4.85779729351906 0.336666666666667 0.179 0.0151028400123813 0.326753516892378 3.50477122821297 1.07772053864486 P35251 RFC1 P35251.T110.p_RFC1 P35251_T110t _1_1_110_110 P35251 P35251|P35251-2 Replication factor C subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24943.24943.3 17.56 17.56 2.204 4 1 1 0 954.0822 2780.2683 T110t TMT10 101 (R) QDPVTYISEtDEEDDFMCK (K) QDPVT(0.0)Y(0.0)IS(0.0)ET(0.99)DEEDDFMCK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T RFC1 128765.8 1 6 316.1 367.51 HUMAN 1 18.2094 4.8578 PVVFTVGSPPSGSTP-p O75385;S758-p PVVFTVGSPPSGSTP 0.813735455639079 0.0390967926089024 0.0403333333333333 -0.26 1.72043243532922 18.9019852092844 0.0403333333333334 -0.26 0.672909650046414 0.0128766081279643 0.44595941317288 -3.64399279704977 O75385 ULK1 O75385.S758.p_ULK1 O75385_S758s _1_1_758_758 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20821.20821.3 28.74 28.74 1.118 9 1 1 0 973.1501 2837.4631 S758s TMT10 743 (R) AGGTSSPSPVVFTVGsPPSGSTPPQGPR (T) AGGT(0.0)S(0.0)S(0.0)PS(0.0)PVVFT(0.0)VGS(0.99)PPS(0.0)GS(0.0)T(0.0)PPQGPR s:Phosphorylated S ULK1 113656.3 3 20 351.1 351.01 HUMAN 1 1.7204 -18.902 PVVKKTESPIKLSPA-p Q9Y6X9;S725-p PVVKKTESPIKLSPA 0.75302080919048 0.00210285200041402 0.045 -0.845333333333333 2.35097585327164 41.6563443468021 0.045 -0.845333333333333 0.581972434733498 6.82913291298638e-05 0.585197874061838 -10.9020418661893 Q9Y6X9 MORC2 Q9Y6X9.S725.p_MORC2 Q9Y6X9_S725s _1_1_725_725 Q9Y6X9 Q9Y6X9|Q9Y6X9-2 MORC family CW-type zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7700.7700.3 8.61 3.92 2.611 2 1 1 0 523.9796 1489.9557 S725s TMT10 722 (K) KTEsPIK (L) KT(0.0)ES(0.99)PIK K:TMT10,s:Phosphorylated S MORC2 118619.8 5 6 309.1 372.4 HUMAN 1 2.351 -41.6563 PVVNNDISSPCEQIM-p O15014;S274-p PVVNNDISSPCEQIM 0.78149643092872 0.169258721912835 -0.0513333333333333 0.151666666666667 2.05473336552687 10.143559765027 -0.0513333333333334 0.151666666666667 0.623055398651512 0.0967484516822501 -0.52088930485269 2.0058388016768 O15014 ZNF609 O15014.S274.p_ZNF609 O15014_S252sS274s_2_2_252_274 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37469.37469.4 17.02 17.02 1.215 5 2 2 0 1033.5189 3971.1006 S252s S274s TMT10 250 (K) MEsPVSTPAVLPIHLLVPVVNNDIsSPCEQIMVR (T) MES(0.99)PVS(0.0)T(0.0)PAVLPIHLLVPVVNNDIS(0.99)S(0.0)PCEQIMVR C:Carbamidomethylation,s:Phosphorylated S ZNF609 152443.5 1 29 63.1 699.07 HUMAN 1 -2.0547 10.1436 PVVSDFDSDEEQDER-p P51531;S1572-p PVVSDFDSDEEQDER 0.296077692655468 0.255170453943128 0.518 0.695666666666667 9.95458025855948 7.81365733877554 0.518 0.695666666666667 0.101051316093403 0.165437617128469 1.97382055377359 1.60232216448021 P51531 SMARCA2 P51531.S1572.p_SMARCA2 P51531_S1572s _1_1_1572_1572 P51531 P51531|P51531-2|F6VDE0|B1ALF6|B4DNT1|A0A0U1RR26|B1ALG2|F6T8Q0 Probable global transcription activator SNF2L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13102.13102.3 19.6 19.6 5.592 2 1 1 0 835.391 2424.1931 S1572s TMT10 1563 (K) AKPVVSDFDsDEEQDER (E) AKPVVS(0.0)DFDS(0.99)DEEQDER K:TMT10,s:Phosphorylated S SMARCA2 181903.8 1 24 392.2 331.85 HUMAN 1 9.9546 7.8137 PVVVRQVSPGPRPVL-p Q5VV67;S369-p PVVVRQVSPGPRPVL 0.0904989301263926 0.239218235802247 -0.482666666666667 -0.164333333333333 22.1900018592233 8.18389308777329 -0.482666666666667 -0.164333333333333 0.00603948370824825 0.151918509645027 -4.36551363020621 -1.66650586089331 Q5VV67 PPRC1 Q5VV67.S369.p_PPRC1 Q5VV67_S369s_1_1_369_369 Q5VV67 Q5VV67|Q5VV67-2|E7EVG6 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37890.37890.4 25.34 19.49 6.273 8 1 1 0 1078.5532 4248.2522 Q367q S369s Hydrogen 367 (R) qVsPGPRPVLLDDSLETSSALQLLMPTLESETEAAVPK (V) Q(1.0)VS(0.99)PGPRPVLLDDS(0.0)LET(0.0)S(0.0)S(0.0)ALQLLMPT(0.0)LES(0.0)ET(0.0)EAAVPK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S PPRC1 179024.3 2 4 1130.1 174.25 HUMAN 1 -22.19 -8.1839 PVYEDAASFKAELSY-p Q14247;S426-p PVYEDAASFKAELSY 0.0719549135296335 0.468753626954891 0.435333333333333 0.113333333333333 24.6787830651577 4.38600217636431 0.435333333333333 0.113333333333333 0.00340503588709828 0.364250186129332 4.96287974637097 0.990052038943261 Q14247 CTTN Q14247.S426.p_CTTN Q14247_S426s _1_1_426_426 Q14247 Q14247-2|Q14247-3 Src substrate cortactin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24060.24060.4 9.32 6.05 1.181 10 1 1 0 1121.8173 4404.2764 S426s TMT10 399 (K) TQTPPVSPAPQPTEERLPSSPVYEDAAsFKAELSYR (G) T(0.0)QT(0.0)PPVS(0.0)PAPQPT(0.0)EERLPS(0.0)S(0.0)PVY(0.0)EDAAS(0.99)FKAELS(0.0)Y(0.0)R K:TMT10,s:Phosphorylated S CTTN 61756.2 1 12 493.1 293.68 HUMAN 1 24.6788 4.386 PVYIPNLSPPANAGI-p Q9HCE3;S602-p PVYIPNLSPPANAGI 0.519799428454533 0.413389498706711 0.114333333333333 0.0873333333333334 5.24823339316186 5.10360196463808 0.114333333333333 0.0873333333333333 0.298659724871013 0.308773345656833 1.14935978653396 1.12277931363571 Q9HCE3 ZNF532 Q9HCE3.S602.p_ZNF532 Q9HCE3_S602s _1_1_602_602 Q9HCE3 Q9HCE3 Zinc finger protein 532 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36039.36039.4 19.58 19.58 2.844 6 1 1 0 799.6899 3115.7717 S602s TMT10 587 (K) VLSSVNPVPVYIPNLsPPANAGITLPTR (G) VLS(0.0)S(0.0)VNPVPVY(0.0)IPNLS(0.99)PPANAGIT(0.0)LPT(0.0)R s:Phosphorylated S ZNF532 144089.8 4 8 397.1 329.01 HUMAN 1 5.2482 5.1036 PVYSPPGSPPPGDPR-p O75676;S347-p PVYSPPGSPPPGDPR 0.920880543047576 0.123268121241396 -0.0166666666666667 -0.180666666666667 0.701553996487604 11.9934472081444 -0.0166666666666667 -0.180666666666667 0.850833537692592 0.0631910074265062 -0.197244495143736 -2.33001052502941 O75676 RPS6KA4 O75676.S347.p_RPS6KA4 O75676_S347s _1_1_347_347 O75676 O75676|O75676-2|E9PJN1 Ribosomal protein S6 kinase alpha-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.32350.32350.4 14.15 14.15 2.168 5 1 1 0 917.1935 3585.7699 S347s TMT10 324 (R) SELDVGNFAEEFTRLEPVYSPPGsPPPGDPR (I) S(0.0)ELDVGNFAEEFT(0.0)RLEPVY(0.0)S(0.0)PPGS(0.99)PPPGDPR s:Phosphorylated S RPS6KA4 86174.8 6 1 1564.1 131.32 HUMAN 1 -0.7016 -11.9934 PWDVHVHSDLAKDLD-p Q6UN15;S37-p PWDVHVHSDLAKDLD 0.525653379747636 0.006371249808731 -0.163 0.573333333333333 5.16607243549932 31.603700326884 -0.163 0.573333333333333 0.304363630958237 0.000691241760013389 -1.13440647519099 6.92353225152713 Q6UN15 FIP1L1 Q6UN15.S37.p_FIP1L1 Q6UN15_S37s _1_1_37_37 Q6UN15 A0A0B4J203|Q6UN15 Pre-mRNA 3'-end-processing factor FIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30099.30099.4 18.64 18.64 4.44 5 1 1 0 1027.4934 4026.9762 S37s TMT10 9 (R) LVSELSGGTGGDEEEEWLYGGPWDVHVHsDLAK (D) LVS(0.0)ELS(0.0)GGT(0.0)GGDEEEEWLY(0.0)GGPWDVHVHS(0.99)DLAK K:TMT10,s:Phosphorylated S FIP1L1 66639.3 1 2 404.1 326.66 HUMAN 1 -5.1661 31.6037 PWEPSLESEEEVEEE-p J3KPJ0;S22-p PWEPSLESEEEVEEE 0.880412543483505 0.27743464957103 0.0253333333333333 -0.108333333333333 1.088265167421 7.33645059822553 0.0253333333333333 -0.108333333333333 0.778347407575339 0.184652392966394 0.295874590047503 -1.51934785139025 J3KPJ0 GGT6 J3KPJ0.S22.p_GGT6 J3KPJ0_S22s _1_1_22_22 J3KPJ0 J3KPJ0|Q6P531|Q6P531-2 Glutathione hydrolase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36392.36392.3 26.34 26.34 3.938 4 1 1 0 1188.2354 3482.7264 S22s TMT10 13 (K) LLPWEPSLEsEEEVEEEETSEALVLNPR (R) LLPWEPS(0.0)LES(0.99)EEEVEEEET(0.0)S(0.0)EALVLNPR s:Phosphorylated S GGT6 51748.7 15 1 4811.1 26.34 HUMAN 1 1.0883 -7.3365 PWGRLHRSPLTFPAW-p J3KNZ9;S750-p PWGRLHRSPLTFPAW 0.500999728676766 0.0072606475925265 0.0986666666666667 -0.989 5.53329375056834 30.6006636286601 0.0986666666666667 -0.989 0.279685933751976 0.000870830511534453 1.20095166661536 -6.60623073406804 J3KNZ9 FBRS J3KNZ9.S750.p_FBRS J3KNZ9_S750s _1_1_750_750 J3KNZ9 J3KNZ9|Q9HAH7-1 Probable fibrosin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19762.19762.4 13.21 13.21 11.227 2 1 1 0 628.3409 2430.372 S750s TMT10 747 (R) LHRsPLTFPAWVRPPEAAR (T) LHRS(0.99)PLT(0.0)FPAWVRPPEAAR s:Phosphorylated S FBRS 104109.7 1 7 767.1 229.08 HUMAN 1 5.5333 -30.6007 PWKEETDTDLEVVLE-p Q1ED39;T310-p PWKEETDTDLEVVLE 0.280234440802158 0.0535143706010079 0.159666666666667 -0.263666666666667 10.4407879427173 16.9538523303831 0.159666666666667 -0.263666666666667 0.0903485539004294 0.0201657680224564 2.0584053944725 -3.25108225167971 Q1ED39 KNOP1 Q1ED39.T310.p_KNOP1 Q1ED39_T310t _1_1_310_310 Q1ED39 Q1ED39 Lysine-rich nucleolar protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22252.22252.5 21.39 18.38 2.375 3 1 1 0 766.2126 3747.0622 T310t TMT10 294 (K) RKESGVAGDPWKEETDtDLEVVLEK (K) RKES(0.0)GVAGDPWKEET(0.0)DT(0.99)DLEVVLEK K:TMT10,t:Phosphorylated T KNOP1 51759.2 2 9 660.1 251.7 HUMAN 1 10.4408 -16.9539 PWLLPDGSPVDIFAK-p Q6P1J9;S465-p PWLLPDGSPVDIFAK 0.16550315241392 0.0142923642473555 -0.344 0.401666666666667 15.6305282955898 25.5802804079187 -0.344 0.401666666666667 0.0273493601599636 0.00276676299996857 -2.99756502005944 5.18559234280178 Q6P1J9 CDC73 Q6P1J9.S465.p_CDC73 Q6P1J9_S465s _1_1_465_465 Q6P1J9 Q6P1J9|A0A1B0GUB2 Parafibromin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.37105.37105.3 15.91 15.91 99 1 1 1 0 812.7635 2356.3106 S465s TMT10 456 (K) GWPWLLPDGsPVDIFAK (I) GWPWLLPDGS(1.0)PVDIFAK K:TMT10,s:Phosphorylated S CDC73 60689.6 1 4 4030.1 38.87 HUMAN 1 -15.6305 25.5803 PWLLRSKSPVGNPQL-p Q9Y4F3;S1093-p PWLLRSKSPVGNPQL 0.15939479918381 0.00327770596929341 0.229333333333333 0.746333333333333 15.9680865777442 37.2215090510856 0.229333333333333 0.746333333333333 0.0253041260451951 0.000189604698377704 3.06206496883824 8.94917244801712 Q9Y4F3 KIAA0430 Q9Y4F3.S1093.p_KIAA0430 Q9Y4F3_S1093s _1_1_1093_1093 Q9Y4F3 Q9Y4F3|Q9Y4F3-5|Q9Y4F3-4|Q9Y4F3-3|G8JLP4 Meiosis regulator and mRNA stability factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17212.17212.3 16.35 11.49 1.399 3 1 1 0 732.7364 2116.2279 S1093s TMT10 1091 (R) SKsPVGNPQLIQFSR (E) S(0.0)KS(0.99)PVGNPQLIQFS(0.0)R K:TMT10,s:Phosphorylated S MARF1 195936.7 5 5 1655.1 123.29 HUMAN 1 15.9681 37.2215 PWNRAQHSLPRAAAL-p Q15569;S540-p PWNRAQHSLPRAAAL 0.862029975440239 0.961050637830868 -0.027 0.0133333333333334 1.26080965806286 0.2483192812137 -0.027 0.0133333333333334 0.74803003177946 0.944426298362966 -0.338078284092333 0.0729962893355382 Q15569 TESK1 Q15569.S540.p_TESK1 Q15569_S540s _1_1_540_540 Q15569 Q15569 Dual specificity testis-specific protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4401.4401.3 9.23 9.23 99 1 1 1 0 373.1952 1037.6053 S540s TMT10 537 (R) AQHsLPR (A) AQHS(1.0)LPR s:Phosphorylated S TESK1 68596 1 4 3696.1 45.06 HUMAN 1 -1.2608 0.2483 PWNRLHRTPPSFPTP-p Q8WXX7;T799-p PWNRLHRTPPSFPTP 0.677588713527585 0.0430524791563996 0.0613333333333333 0.248666666666667 3.16345359973772 18.3012568715678 0.0613333333333333 0.248666666666667 0.482674816364794 0.014786803881883 0.753420460662528 3.52054930959604 Q8WXX7 AUTS2 Q8WXX7.T799.p_AUTS2 Q8WXX7_T799t _1_1_799_799 Q8WXX7 Q8WXX7|Q8WXX7-2|A0A087WVB5|Q8WXX7-5 Autism susceptibility gene 2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22698.22898.4 21.9 12.25 4.192 3 1 1 0 773.4234 3010.7031 T799t TMT10 796 (R) LHRtPPSFPTPPPWLKPGELER (S) LHRT(0.99)PPS(0.0)FPT(0.0)PPPWLKPGELER K:TMT10,t:Phosphorylated T AUTS2 139379 3 4 684.1 243.98 HUMAN 1 3.1635 18.3013 PWPSPCPSPSSRPPS-p Q99700;S558-p PWPSPCPSPSSRPPS 0.466667919827382 0.656531830979053 0.113666666666667 0.06 6.11002317671147 2.49709534691204 0.113666666666667 0.06 0.244905017212292 0.562717556730221 1.30413967585329 0.616196867908261 Q99700 ATXN2 Q99700.S558.p_ATXN2 Q99700_S554sS558s_2_2_554_558 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20090.20090.4 9.41 9.41 1.293 5 2 2 0 677.3171 2546.3135 S554s S558s TMT10 545 (R) VVNGGVPWPsPCPsPSSRPPSR (Y) VVNGGVPWPS(0.99)PCPS(0.99)PS(0.0)S(0.0)RPPS(0.0)R C:Carbamidomethylation,s:Phosphorylated S ATXN2 140907.9 4 24 176.1 481.52 HUMAN 1 6.11 2.4971 PYAGAPGSPRTKRKL-p Q69YU3;S461-p PYAGAPGSPRTKRKL 0.561252574128087 0.601680212479641 0.081 -0.0556666666666666 4.61888828752812 2.99190614564233 0.081 -0.0556666666666667 0.345232100972919 0.502122156596373 1.03373024242989 -0.71866715456257 Q69YU3 ANKRD34A Q69YU3.S461.p_ANKRD34A Q69YU3_S461s _1_1_461_461 Q69YU3 Q69YU3 Ankyrin repeat domain-containing protein 34A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18950.19152.3 20.12 20.12 9.991 3 1 1 0 638.995 1835.0013 S461s TMT10 447 (R) APSLPAPPYAGAPGsPR (T) APS(0.0)LPAPPY(0.0)AGAPGS(0.99)PR s:Phosphorylated S ANKRD34A 52919.9 5 10 922.1 199.97 HUMAN 1 4.6189 -2.9919 PYCPMEQSPGDAKQI-p Q9H871;S382-p PYCPMEQSPGDAKQI 0.929264170031949 0.0290503830612583 0.022 0.341 0.632536708772284 20.8062709694153 0.022 0.341 0.86446283959165 0.00830563617424131 0.178981610577458 4.05017485367437 Q9H871 RMND5A Q9H871.S382.p_RMND5A Q9H871_S382s _1_1_382_382 Q9H871 Q9H871 Protein RMD5 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13585.13585.3 11.97 11.97 11.972 2 1 1 0 726.6541 2097.9808 S382s TMT10 374 (K) CPYCPMEQsPGDAK (Q) CPY(0.0)CPMEQS(0.99)PGDAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RMND5A 44847.6 1 1 6377.1 11.97 HUMAN 1 0.6325 20.8063 PYDGERPSPEPSPFG-p Q8N612-2;S596-p PYDGERPSPEPSPFG 0.662590012698335 0.211538021079483 0.0626666666666667 0.13 3.34597811126449 8.87498461577996 0.0626666666666667 0.13 0.462809418822996 0.129569128729778 0.789849447345161 1.78608952093466 Q8N612 FAM160A2 Q8N612.2.S596.p_FAM160A2 Q8N612-2_S596s _1_1_596_596 Q8N612-2 Q8N612-2|E9PJK5|Q8N612-3 Isoform 2 of FTS and Hook-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18198.18198.3 14.72 14.72 3.317 6 1 1 0 877.0696 2549.2258 S596s TMT10 585 (R) TWSAPYDGERPsPEPSPFGSR (T) T(0.0)WS(0.0)APY(0.0)DGERPS(0.99)PEPS(0.0)PFGS(0.0)R s:Phosphorylated S FAM160A2 108162.9 2 2 2416.1 84.39 HUMAN 1 3.346 8.875 PYEDSDSSEDEVDWQ-p O14730;S128-p PYEDSDSSEDEVDWQ 0.391198751974399 0.540672700464305 -0.130333333333333 0.058 7.51963189091796 3.59216710627584 -0.130333333333333 0.058 0.177025899955126 0.437303838425393 -1.55169985031251 0.838190781692214 O14730 RIOK3 O14730.S128.p_RIOK3 O14730_S125sS127sS128s_3_3_125_128 O14730 O14730|O14730-2|B4E1Q4 Serine/threonine-protein kinase RIO3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18166.18390.5 17.07 17.07 3.039 7 3 3 0 980.4446 4658.289 S125s S127s S128s TMT10 119 (K) VHPYEDsDssEDEVDWQDTRDDPYRPAKPVPTPK (K) VHPY(0.0)EDS(0.99)DS(0.99)S(0.99)EDEVDWQDT(0.0)RDDPY(0.0)RPAKPVPT(0.0)PK K:TMT10,s:Phosphorylated S RIOK3 59548.4 6 5 3155.1 59.09 HUMAN 1 -7.5196 3.5922 PYEPEGQSVDSDSES-p Q15464;S307-p PYEPEGQSVDSDSES 0.787817207878045 0.471719947167064 -0.0413333333333333 0.0886666666666667 1.99933718836259 4.35000881200623 -0.0413333333333334 0.0886666666666667 0.63105364728913 0.367281555268576 -0.508655250962227 0.983292843421632 Q15464 SHB Q15464.S307.p_SHB Q15464_S307sS310s_2_2_307_310 Q15464 Q15464 SH2 domain-containing adapter protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24632.24632.3 18.27 18.27 1.2 9 2 2 0 1115.8171 3185.496 S307s S310s TMT10 293 (K) GIQLYDTPYEPEGQsVDsDSESTVSPR (L) GIQLY(0.0)DT(0.0)PY(0.0)EPEGQS(0.99)VDS(0.99)DS(0.0)ES(0.0)T(0.0)VS(0.0)PR s:Phosphorylated S SHB 55783 1 6 1825.1 112.53 HUMAN 1 -1.9993 4.35 PYERTRLSPPRASYD-p Q96PK6;S582-p PYERTRLSPPRASYD 0.59491935042203 0.181705796278294 0.0703333333333333 0.185 4.16062039720469 9.74278291591056 0.0703333333333333 0.185 0.383652436161224 0.106101545115517 0.947710487348235 1.93629526209567 Q96PK6 RBM14 Q96PK6.S582.p_RBM14 Q96PK6_S582s _1_1_582_582 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9735.9735.4 12.39 8.77 1.368 5 1 1 0 608.8244 2352.3076 S582s Hydrogen 579 (R) TRLsPPRASYDDPYKK (A) T(0.0)RLS(0.99)PPRAS(0.0)Y(0.0)DDPY(0.0)KK K:TMT10-Lys-Only,s:Phosphorylated S RBM14 69661.6 41 14 151.1 510.8 HUMAN 1 4.1606 9.7428 PYFHAGGSKCSTWPL-p P16471;S411-p PYFHAGGSKCSTWPL 0.769111039821672 0.0352524975536127 -0.0563333333333333 0.262333333333333 2.18746769031071 19.5594412656246 -0.0563333333333334 0.262333333333333 0.604300885966734 0.0110676616398707 -0.549929178974407 3.78159362096545 P16471 PRLR P16471.S411.p_PRLR P16471_S411s _1_1_411_411 P16471 P16471|P16471-2 Prolactin receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17587.17587.3 12.28 12.28 5.087 2 1 1 0 538.9548 1534.8782 S411s TMT10 403 (K) IPYFHAGGsK (C) IPY(0.0)FHAGGS(0.99)K K:TMT10,s:Phosphorylated S PRLR 70474.2 1 2 827.1 217.44 HUMAN 1 -2.1875 19.5594 PYGGGYGSGGGSGGY-p P51991;S366-p PYGGGYGSGGGSGGY 0.12442358963188 0.652137445248403 0.268333333333333 0.0496666666666667 18.8276666752555 2.53510763926234 0.268333333333333 0.0496666666666667 0.0130988549337823 0.557813776635692 3.63174934194939 0.624215249685318 P51991 HNRNPA3 P51991.S366.p_HNRNPA3 P51991_S366s _1_1_366_366 P51991 P51991|P51991-2 Heterogeneous nuclear ribonucleoprotein A3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7947.8153.3 18.39 18.39 2.117 9 1 1 0 740.6446 2139.9529 S366s TMT10 355 (R) SSGSPYGGGYGsGGGSGGYGSR (R) S(0.0)S(0.0)GS(0.0)PY(0.0)GGGY(0.0)GS(0.99)GGGS(0.0)GGY(0.0)GS(0.0)R s:Phosphorylated S HNRNPA3 39822.5 6 5 2139.1 96.03 HUMAN 1 18.8277 2.5351 PYGKRAPSPGAYKTA-p P54259;S645-p PYGKRAPSPGAYKTA 0.484991842151164 0.189277432033007 -0.132666666666667 0.133333333333333 5.79112304810653 9.50589118437975 -0.132666666666667 0.133333333333333 0.263564974138407 0.112049747333986 -1.24726306603982 1.89525512130248 P54259 ATN1 P54259.S645.p_ATN1 P54259_S645s _1_1_645_645 P54259 P54259 Atrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8088.8301.3 10.75 8.57 4.375 2 1 1 0 495.6059 1404.8364 S645s TMT10 642 (K) RAPsPGAYK (T) RAPS(0.99)PGAY(0.0)K K:TMT10,s:Phosphorylated S ATN1 125583.1 4 5 869.1 209.92 HUMAN 1 -5.7911 9.5059 PYGVTPASPSGHSQG-p E9PC69;S618-p PYGVTPASPSGHSQG 0.195880649499579 0.875224471585651 0.225 -0.016 13.806461897471 0.815012357189333 0.225 -0.016 0.0416249581864941 0.828893557779128 2.65745286397431 -0.226788250505879 E9PC69 NotFound E9PC69.S618.p_NotFound E9PC69_S618s _1_1_618_618 E9PC69 Q7KZI7|Q7KZI7-8|E9PC69|Q7KZI7-11|Q7KZI7-6|Q7KZI7-3|Q7KZI7-14|Q7KZI7-12|Q7KZI7-9|Q7KZI7-4|Q7KZI7-16|Q7KZI7-5|Q7KZI7-15|Q7KZI7-2|E7ETY4|Q7KZI7-7|Q7KZI7-13|Q7KZI7-10 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10937.10937.3 24.35 22.98 1.703 5 1 1 0 835.7293 2425.2058 S618s TMT10 606 (R) DQQNLPYGVTPAsPSGHSQGR (R) DQQNLPY(0.0)GVT(0.0)PAS(0.99)PS(0.0)GHS(0.0)QGR s:Phosphorylated S MARK2 87089.2 4 18 200.1 451.67 HUMAN 1 13.8065 -0.815 PYHKKRKYELGRPAA-p P62241;Y27-p PYHKKRKYELGRPAA 0.521322536311589 0.768113888718909 -0.192333333333333 0.0293333333333334 5.23081107805052 1.58410270140312 -0.192333333333333 0.0293333333333334 0.299860245482486 0.694368050720053 -1.14619217840084 0.41454854512338 P62241 RPS8 P62241.Y27.p_RPS8 P62241_Y27y _1_1_27_27 P62241 P62241|Q5JR95 40S ribosomal protein S8 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.9574.9574.3 8.54 2.99 4.606 2 1 1 0 586.6505 1677.9688 Y27y TMT10 27 (K) yELGRPAANTK (I) Y(0.99)ELGRPAANT(0.0)K K:TMT10,y:Phosphorylated Y RPS8 24490 2 1 388.1 8.54 HUMAN 1 -5.2308 1.5841 PYIPAENSPTRQQFH-p Q86XP3;S96-p PYIPAENSPTRQQFH 0.743332697084522 0.0480332831393178 0.0513333333333333 0.280666666666667 2.44707520061442 17.6313230854195 0.0513333333333333 0.280666666666667 0.569236159538332 0.0172531219266491 0.605681846533026 3.38533253178411 Q86XP3 DDX42 Q86XP3.S96.p_DDX42 Q86XP3_S96s _1_1_96_96 Q86XP3 Q86XP3|J3KTK9 ATP-dependent RNA helicase DDX42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24208.24208.3 34.69 34.69 1.495 6 1 1 0 1424.6202 4191.8741 S96s TMT10 66 (K) RANFDEENAYFEDEEEDSSNVDLPYIPAENsPTR (Q) RANFDEENAY(0.0)FEDEEEDS(0.0)S(0.0)NVDLPY(0.0)IPAENS(0.99)PT(0.0)R s:Phosphorylated S DDX42 103258.6 36 1 914.1 200.89 HUMAN 1 2.4471 17.6313 PYLDKPPTPLHFYRD-p P0C869-6;T37-p PYLDKPPTPLHFYRD 0.878892603309227 0.0371601791346665 -0.0336666666666667 0.324 1.10177721997248 19.2225373078843 -0.0336666666666667 0.324 0.775929525753593 0.0119604155573478 -0.29921687201961 3.71074803695703 P0C869 JMJD7-PLA2G4B P0C869.6.T37.p_JMJD7-PLA2G4B P0C869-6_T37t _1_1_37_37 P0C869-6 P0C869-6|P0C869-7|P0C869-8|P0C870 Isoform 5 of Cytosolic phospholipase A2 beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31272.31272.4 15.66 14.64 3.696 3 1 1 0 791.676 3083.7156 T37t TMT10 22 (R) ELCVPLAVPYLDKPPtPLHFYR (D) ELCVPLAVPY(0.0)LDKPPT(0.99)PLHFY(0.0)R C:Carbamidomethylation,K:TMT10,t:Phosphorylated T PLA2G4B 115487.8 1 1 5879.1 15.66 HUMAN 1 -1.1018 19.2225 PYLLTKNSPPFLKSD-p Q5VUA4;S709-p PYLLTKNSPPFLKSD 0.222871214848489 0.00423173689719473 -0.495666666666667 0.618666666666667 12.5422292321497 34.9105457428848 -0.495666666666667 0.618666666666667 0.0556899819060076 0.000322808844835738 -2.42889692284133 8.06134006207597 Q5VUA4 ZNF318 Q5VUA4.S709.p_ZNF318 Q5VUA4_S709s _1_1_709_709 Q5VUA4 Q5VUA4|Q5VUA4-2 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17914.17914.2 12.09 3.88 99 1 1 1 0 670.8716 1260.7716 S709s TMT10 708 (K) NsPPFLK (S) NS(1.0)PPFLK K:TMT10,s:Phosphorylated S ZNF318 252762.4 6 16 37.1 870.88 HUMAN 1 -12.5422 34.9105 PYNTPQLSPATTPAN-p Q14C86-6;S466-p PYNTPQLSPATTPAN 0.71570695508954 0.321537882464305 0.0503333333333333 -0.137 2.74081526739716 6.51437707501534 0.0503333333333333 -0.137 0.532008380079235 0.223132223150871 0.667258705019843 -1.37535605269804 Q14C86 GAPVD1 Q14C86.6.S466.p_GAPVD1 Q14C86-6_S466s _1_1_466_466 Q14C86-6 Q14C86-6|Q14C86-2|Q14C86-5|Q14C86-4|Q14C86-3|F8W9S7|B4DGD8|A0A0A0MQV8|B0QZ65 Isoform 6 of GTPase-activating protein and VPS9 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19382.19382.3 23.03 23.03 2.368 9 1 1 0 1110.9129 3250.7596 S466s TMT10 452 (K) SSSLEMTPYNTPQLsPATTPANKK (N) S(0.0)S(0.0)S(0.0)LEMT(0.0)PY(0.0)NT(0.0)PQLS(0.99)PAT(0.0)T(0.0)PANKK K:TMT10,s:Phosphorylated S GAPVD1 167648.8 24 4 268.1 394.98 HUMAN 1 2.7408 -6.5144 PYPGGLNTPYPGGMT-p O94906;T220-p PYPGGLNTPYPGGMT 0.831127663428638 0.597009099880102 0.0303333333333333 0.0566666666666667 1.54632814915423 3.03290673381557 0.0303333333333333 0.0566666666666667 0.70043394504911 0.497404060909719 0.405812280759996 0.726985458264129 O94906 PRPF6 O94906.T220.p_PRPF6 O94906_T220t_1_1_220_220 O94906 O94906|O94906-2 Pre-mRNA-processing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28969.29460.4 21.22 19.65 2.136 8 1 1 0 1148.5656 4510.2609 N219n T220t TMT10 204 (R) QTQFGGLNTPYPGGLntPYPGGMTPGLMTPGTGELDMRK (I) Q(0.0)T(0.0)QFGGLN(0.0)T(0.0)PY(0.0)PGGLN(0.99)T(0.99)PY(0.0)PGGM(0.0)T(0.0)PGLM(0.0)T(0.0)PGT(0.0)GELDM(0.0)RK K:TMT10,n:Deamidated,t:Phosphorylated T PRPF6 107721.8 4 4 1650.1 123.56 HUMAN 1 1.5463 3.0329 PYRSHSLSPSPVNKH-p Q96GE4;S451-p PYRSHSLSPSPVNKH 0.17801215785102 0.722920944129696 0.238 0.0443333333333333 14.8198023963371 1.93964409202943 0.238 0.0443333333333334 0.0329624709735784 0.639787264437264 2.84472279097909 0.495337035262162 Q96GE4 CEP95 Q96GE4.S451.p_CEP95 Q96GE4_S451s _1_1_451_451 Q96GE4 Q96GE4|A0A0A0MTQ1|Q96GE4-2 Centrosomal protein of 95 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8502.8502.3 11.28 11.28 1.157 4 1 1 0 564.3033 1610.9266 S451s TMT10 447 (R) SHSLsPSPVNK (H) S(0.0)HS(0.0)LS(0.99)PS(0.0)PVNK K:TMT10,s:Phosphorylated S CEP95 95922.6 1 4 2407.1 84.85 HUMAN 1 14.8198 1.9396 PYSDIIATPGPRFHI-p O60216;T623-p PYSDIIATPGPRFHI 0.822556582247602 0.505433393202291 0.048 0.0633333333333334 1.63175567261603 3.97153988695515 0.048 0.0633333333333334 0.686790742850983 0.400724606679298 0.425614028746049 0.911531931804978 O60216 RAD21 O60216.T623.p_RAD21 O60216_T623t _1_1_623_623 O60216 O60216|E5RFZ5|E5RI01|E5RG18 Double-strand-break repair protein rad21 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21419.21419.4 15.5 15.5 3.007 4 1 1 0 781.4133 3042.6512 T623t TMT10 605 (K) KQQAIELTQEEPYSDIIAtPGPR (F) KQQAIELT(0.0)QEEPY(0.0)S(0.0)DIIAT(0.99)PGPR K:TMT10,t:Phosphorylated T RAD21 71973.5 1 6 1167.1 170.49 HUMAN 1 1.6318 3.9715 PYSPAYLSPPPESSW-p Q53ET0;S136-p PYSPAYLSPPPESSW 0.540716629644627 0.978310404113495 0.123 0.00333333333333334 4.9268509634864 0.136240771085761 0.123 0.00333333333333333 0.321599158465433 0.969116355043315 1.09063594866175 0.0405363238080733 Q53ET0 CRTC2 Q53ET0.S136.p_CRTC2 Q53ET0_S136s _1_1_136_136 Q53ET0 Q53ET0 CREB-regulated transcription coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19670.19670.3 15.83 15.83 1.341 8 1 1 0 894.754 2602.2775 S136s TMT10 124 (R) HIDSSPYSPAYLsPPPESSWR (R) HIDS(0.0)S(0.0)PY(0.0)S(0.0)PAY(0.0)LS(0.99)PPPES(0.0)S(0.0)WR s:Phosphorylated S CRTC2 73528.7 1 3 1040.1 185.06 HUMAN 1 4.9269 0.1362 PYSQRPASPTAIRRI-p Q99569;S281-p PYSQRPASPTAIRRI 0.195739977752225 0.0128060942428854 0.207 0.371333333333333 13.8161754207995 26.3716995829128 0.207 0.371333333333333 0.0415319629505056 0.0023058446349836 2.65922962721596 5.3925706718049 Q99569 PKP4 Q99569.S281.p_PKP4 Q99569_S281s _1_1_281_281 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6309.6309.4 12.36 12.36 1.6 5 1 1 0 535.2825 2058.1406 S281s TMT10 271 (R) AASPYSQRPAsPTAIRR (I) AAS(0.0)PY(0.0)S(0.0)QRPAS(0.99)PT(0.0)AIRR s:Phosphorylated S PKP4 132664.7 9 9 122.1 546.31 HUMAN 1 13.8162 26.3717 PYSRRQRSVSPYSRR-p Q9NYV4-2;S301-p PYSRRQRSVSPYSRR 0.288407607200218 0.20297037548925 0.171 0.137333333333333 10.1831598100375 9.10991449614398 0.171 0.137333333333333 0.0958702851251273 0.122746339720813 2.01355030979735 1.82672549241454 Q9NYV4 CDK12 Q9NYV4.2.S301.p_CDK12 Q9NYV4-2_S301sS303s_2_2_301_303 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5080.5080.2 7.61 7.61 2.615 4 2 2 0 611.7375 1079.5592 Q299q S301s S303s Hydrogen 299 (R) qRsVsPYSR (R) Q(1.0)RS(0.99)VS(0.99)PY(0.0)S(0.0)R q:Pyroglutamic acid,s:Phosphorylated S CDK12 163853.1 3 38 59.1 708.76 HUMAN 1 10.1832 9.1099 PYSSADAS_______-p O94804;S968-p PYSSADAS_______ 0.827997063487557 0.339444972258439 -0.0306666666666667 0.118666666666667 1.57515634236924 6.2156595827434 -0.0306666666666667 0.118666666666667 0.695799906036984 0.239019889742095 -0.412517210264314 1.32256672262752 O94804 STK10 O94804.S968.p_STK10 O94804_S968s _1_1_968_968 O94804 O94804 Serine/threonine-protein kinase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26817.26817.2 13.83 13.83 4.5 4 1 1 0 700.8035 1320.6309 S968s TMT10 959 (K) FFPYSSADAs (-) FFPY(0.0)S(0.0)S(0.0)ADAS(0.99) s:Phosphorylated S STK10 112818 3 11 728.1 236.53 HUMAN 1 -1.5752 6.2157 PYVAASHTPPINGSD-p Q99081-3;T313-p PYVAASHTPPINGSD 0.222155146551169 0.112183659366327 0.214 0.175 12.5730449984578 12.5372902822962 0.214 0.175 0.0552962271067408 0.0557533505411242 2.43440896367009 2.42673856267781 Q99081 TCF12 Q99081.3.T313.p_TCF12 Q99081-3_T313t _1_1_313_313 Q99081-3 Q99081-3|F5GY10|Q99081-2|Q99081-4 Isoform 3 of Transcription factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16963.16963.3 23.51 19.54 1.797 11 1 1 0 990.147 2888.4587 T313t TMT10 300 (R) GSTSSSPYVAASHtPPINGSDSILGTR (G) GS(0.0)T(0.0)S(0.0)S(0.0)S(0.0)PY(0.0)VAAS(0.0)HT(0.99)PPINGS(0.0)DS(0.0)ILGT(0.0)R t:Phosphorylated T TCF12 76072.1 3 4 1464.1 140.15 HUMAN 1 12.573 12.5373 PYVQAFDSLLAGPVA-p Q01518;S49-p PYVQAFDSLLAGPVA 0.780519381080653 0.0789167244059908 -0.064 0.229666666666667 2.0698624331156 14.6387305037835 -0.064 0.229666666666667 0.620888701155381 0.0343658388795335 -0.524218585876859 2.80918618804068 Q01518 CAP1 Q01518.S49.p_CAP1 Q01518_S49s _1_1_49_49 Q01518 Q01518 Adenylyl cyclase-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.37137.37137.3 21.28 20.32 9.314 3 1 1 0 963.8454 2809.554 S49s TMT10 38 (K) AGAAPYVQAFDsLLAGPVAEYLK (I) AGAAPY(0.0)VQAFDS(0.99)LLAGPVAEY(0.0)LK K:TMT10,s:Phosphorylated S CAP1 52357 1 2 1493.1 137.01 HUMAN 1 -2.0699 14.6387 QAAFKLMSPTGGRVS-p O95487-3;S832-p QAAFKLMSPTGGRVS 0.825813994581394 0.470793866900829 -0.032 0.068 1.60409231198965 4.36156201439724 -0.032 0.068 0.69117937279503 0.366305802804025 -0.419223875173149 0.985463592830227 O95487 SEC24B O95487.3.S832.p_SEC24B O95487-3_S832s _1_1_832_832 O95487-3 O95487-3|O95487-2|O95486 Isoform 3 of Protein transport protein Sec24B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10277.10277.2 7.05 7.05 7.052 2 1 1 0 564.277 1047.5818 S832s TMT10 830 (K) LMsPTGGR (V) LMS(0.99)PT(0.0)GGR s:Phosphorylated S SEC24B 141616.6 1 6 1775.1 115.78 HUMAN 1 -1.6041 4.3616 QAALSPLTPARLLGP-p A0A087X1R1;T414-p QAALSPLTPARLLGP 0.363920347814779 0.910846756486075 0.155 -0.0123333333333333 8.14678359020949 0.567956696221712 0.155 -0.0123333333333333 0.153222181382157 0.87741353665917 1.66061445379449 -0.161677899279723 A0A087X1R1 SMTN A0A087X1R1.T414.p_SMTN A0A087X1R1_S411sT414t_2_2_411_414 A0A087X1R1 A0A087X1R1|A0A087WVP4|P53814-6 Smoothelin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20711.20711.2 12.71 12.71 5.168 3 2 2 0 1063.0249 1965.0967 S411s T414t TMT10 401 (R) LQDGTPQAALsPLtPAR (L) LQDGT(0.0)PQAALS(0.99)PLT(0.99)PAR s:Phosphorylated S,t:Phosphorylated T SMTN 108527.2 1 15 826.1 217.61 HUMAN 1 8.1468 -0.568 QAAPGVRSPVFACSV-p Q9Y6I3-1;S17-p QAAPGVRSPVFACSV 0.744227311761118 0.907875003589267 0.0473333333333333 0.013 2.43521431949635 0.587593791326197 0.0473333333333334 0.013 0.57079290748171 0.873455172207611 0.603163091157922 0.166955279126226 Q9Y6I3 EPN1 Q9Y6I3.1.S17.p_EPN1 Q9Y6I3-1_S17s _1_1_17_17 Q9Y6I3-1 Q9Y6I3-1 Isoform 2 of Epsin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29432.29432.4 10.88 10.88 1.209 3 1 1 0 785.8736 3060.5199 S17s Acetyl 2 (M) GDQSWLWNQAAPGVRsPVFACSVEK (G) GDQS(0.0)WLWNQAAPGVRS(0.99)PVFACS(0.0)VEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EPN1 69266.5 2 1 856.1 210.87 HUMAN 1 2.4352 0.5876 QAASNFKSPVKTIR_-p P67870;S209-p QAASNFKSPVKTIR_ 0.297363648018023 0.00153816434231582 -0.154 -0.948666666666667 9.90588306417318 45.3013411902152 -0.154 -0.948666666666667 0.102190775186368 2.95029797359059e-05 -1.96536367079264 -12.7936274289185 P67870 CSNK2B P67870.S209.p_CSNK2B P67870_S209s _1_1_209_209 P67870 Q5SRQ6|P67870 Casein kinase II subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22654.22654.4 22.01 22.01 1.136 3 1 1 0 785.4341 3058.7479 S209s TMT10 192 (K) IHPMAYQLQLQAASNFKsPVK (T) IHPMAY(0.0)QLQLQAAS(0.0)NFKS(0.99)PVK K:TMT10,s:Phosphorylated S CSNK2B 25284.3 60 2 3873.1 41.5 HUMAN 1 -9.9059 -45.3013 QAASRSPSFGDPQLS-p O95425-2;S263-p QAASRSPSFGDPQLS 0.433984623040525 0.0651265909346296 0.258333333333333 0.428333333333333 6.68101201095204 15.7846298605078 0.258333333333333 0.428333333333333 0.214733003610535 0.0263959327942219 1.40505219680886 3.02484354214095 O95425 SVIL O95425.2.S263.p_SVIL O95425-2_S263s _1_1_263_263 O95425-2 O95425-3|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13561.13561.3 12.88 9.61 1.167 3 1 1 0 684.006 1970.0293 S263s TMT10 261 (R) SPsFGDPQLSPEARPR (C) S(0.0)PS(0.99)FGDPQLS(0.0)PEARPR s:Phosphorylated S SVIL 202384.1 1 6 406.2 324.74 HUMAN 1 6.681 15.7846 QACMKRCSFLWAYAA-p Q8N806;S190-p QACMKRCSFLWAYAA 0.962553763055712 0.595854267917359 0.007 0.0613333333333333 0.320454432251487 3.04457087293333 0.007 0.0613333333333334 0.928869187709097 0.496069941724032 0.0935020678654851 0.729347452745073 Q8N806 UBR7 Q8N806.S190.p_UBR7 Q8N806_S190s _1_1_190_190 Q8N806 Q8N806|E9PCJ7 Putative E3 ubiquitin-protein ligase UBR7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.32056.32056.3 21.51 21.51 9.391 3 1 1 0 808.4349 2343.3048 S190s TMT10 188 (K) RCsFLWAYAAQLAVTK (I) RCS(0.99)FLWAY(0.0)AAQLAVT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UBR7 49367.3 21 3 1053.1 182.86 HUMAN 1 0.3205 3.0446 QACQEVLTPENSRYV-p Q5T481;T1104-p QACQEVLTPENSRYV 0.44457492801222 0.668990133242619 0.132 0.0493333333333333 6.48749483709913 2.38758584916564 0.132 0.0493333333333334 0.224517664696577 0.577087164753132 1.37096862951999 0.592948144505297 Q5T481 RBM20 Q5T481.T1104.p_RBM20 Q5T481_T1104t _1_1_1104_1104 Q5T481 Q5T481 RNA-binding protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21947.21947.4 18.98 18.98 4.211 5 1 1 0 972.2294 3805.9141 T1104t TMT10 1086 (K) ASPPIETDLQNQACQEVLtPENSRYVEMK (S) AS(0.0)PPIET(0.0)DLQNQACQEVLT(0.99)PENS(0.0)RY(0.0)VEMK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T RBM20 135496 1 12 522.1 283.33 HUMAN 1 6.4875 2.3876 QADFQGFTYVNPDFV-p P05129;T674-p QADFQGFTYVNPDFV 0.343971444723671 0.142098927366088 0.155333333333333 0.323 8.60731443224216 11.1674794840263 0.155333333333333 0.323 0.137806136393122 0.0764279219809112 1.74038704374668 2.18447445357889 P05129 PRKCG P05129.T674.p_PRKCG P05129_T655tT674t_2_2_655_674 P05129 P05129|P05129-2 Protein kinase C gamma type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.35081.35081.4 16.04 16.04 1.144 4 2 2 0 1104.5393 4254.1821 T655t T674t N677n TMT10 650 (R) AAPALtPPDRLVLASIDQADFQGFtYVnPDFVHPDAR (S) AAPALT(0.99)PPDRLVLAS(0.0)IDQADFQGFT(0.99)Y(0.0)VN(1.0)PDFVHPDAR t:Phosphorylated T,n:Deamidated PRKCG 79701.6 2 4 2439.2 83.37 HUMAN 1 8.6073 11.1675 QADIPIRSPFGIVKA-p Q14966;S383-p QADIPIRSPFGIVKA 0.438077651310896 0.0105282964335077 -0.104 -0.449 6.600135200609 27.7461222474301 -0.104 -0.449 0.218769351760416 0.00168030366733954 -1.39082095019944 -5.76637848674423 Q14966 ZNF638 Q14966.S383.p_ZNF638 Q14966_S383s _1_1_383_383 Q14966 Q14966|Q14966-3|Q14966-4|A0A096LPH6|Q14966-2 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21261.21261.4 17.22 17.22 9.187 3 1 1 0 732.9139 2848.6652 S383s TMT10 371 (K) KNYQSQADIPIRsPFGIVK (A) KNY(0.0)QS(0.0)QADIPIRS(0.99)PFGIVK K:TMT10,s:Phosphorylated S ZNF638 222047.2 5 3 165.1 494.68 HUMAN 1 -6.6001 -27.7461 QADNFYQTV______-p Q9NZV1;T1035-p QADNFYQTV______ 0.969272902686383 0.0820472852051049 -0.00666666666666667 -0.219666666666667 0.264758951566241 14.3940343933385 -0.00666666666666667 -0.219666666666667 0.940858049457949 0.0363577132990952 -0.0777011702504378 -2.76384058748825 Q9NZV1 CRIM1 Q9NZV1.T1035.p_CRIM1 Q9NZV1_T1035t _1_1_1035_1035 Q9NZV1 Q9NZV1 Cysteine-rich motor neuron 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14867.14867.2 18.33 18.33 1.195 2 1 1 0 943.9352 1806.8972 T1035t TMT10 1024 (K) QNHLQADNFYQtV (-) QNHLQADNFY(0.0)QT(0.99)V t:Phosphorylated T CRIM1 121153.3 2 1 5542.1 18.33 HUMAN 1 -0.2648 -14.394 QADPKPISPQQKSAH-p O75128-2;S897-p QADPKPISPQQKSAH 0.225563990023236 0.00427108793826629 -0.180333333333333 -0.602333333333333 12.4187000710697 34.837302886824 -0.180333333333333 -0.602333333333333 0.0572967505782274 0.00032829911448574 -2.40682816185638 -8.03451047706691 O75128 COBL O75128.2.S897.p_COBL O75128-2_S897s _1_1_897_897 O75128-2 O75128-2|O75128-7 Isoform 2 of Protein cordon-bleu HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13912.13912.3 10.91 7.45 99 1 1 1 0 739.7591 2137.2948 S897s TMT10 889 (R) LQADPKPIsPQQK (S) LQADPKPIS(1.0)PQQK K:TMT10,s:Phosphorylated S COBL 144838.3 2 14 254.1 405.31 HUMAN 1 -12.4187 -34.8373 QAEAEVASLNRRIQL-p P06753-2;S51-p QAEAEVASLNRRIQL 0.763458634683252 0.0816154540949912 0.044 0.225666666666667 2.24678979735721 14.4263435738182 0.044 0.225666666666667 0.5961026057422 0.0360882350392976 0.562787394241381 2.76981448932368 P06753 TPM3 P06753.2.S51.p_TPM3 P06753-2_S51s _1_1_51_51 P06753-2 P06753-2|P06753-5|P06753-6|P06753-3|P06753-4|Q5HYB6|A0A087WWU8|D6R904 Isoform 2 of Tropomyosin alpha-3 chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9134.9134.3 16.11 12.49 99 1 1 1 0 594.6306 1701.9081 S51s TMT10 43 (R) EQAEAEVAsLNRR (I) EQAEAEVAS(1.0)LNRR s:Phosphorylated S TPM3 29260.4 4 2 2934.1 65.55 HUMAN 1 2.2468 14.4263 QAEAQHASGEVEEPP-p P30876;S75-p QAEAQHASGEVEEPP 0.736579803240874 0.580542910292263 -0.0483333333333333 0.0636666666666667 2.51696136837679 3.18681648326666 -0.0483333333333333 0.0636666666666667 0.560149384580773 0.480085237438826 -0.62047007729539 0.757997748343361 P30876 POLR2B P30876.S75.p_POLR2B P30876_S75s _1_1_75_75 P30876 P30876|C9J2Y9 DNA-directed RNA polymerase II subunit RPB2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25442.25442.4 20.2 20.2 20.198 2 1 1 0 964.0006 3773.0162 S75s TMT10 58 (R) IVEDAPPIDLQAEAQHAsGEVEEPPRYLLK (F) IVEDAPPIDLQAEAQHAS(0.99)GEVEEPPRY(0.0)LLK K:TMT10,s:Phosphorylated S POLR2B 135320.6 1 1 4578.1 29.47 HUMAN 1 -2.517 3.1868 QAEATRASPPRSPAE-p Q5T0Z8;S275-p QAEATRASPPRSPAE 0.517675977931098 0.0759248791912698 0.102666666666667 0.219666666666667 5.28113468836045 14.8612817626607 0.102666666666667 0.219666666666667 0.29640568643192 0.0326491458320277 1.15533697826195 2.8506356228235 Q5T0Z8 C6orf132 Q5T0Z8.S275.p_C6orf132 Q5T0Z8_S275s _1_1_275_275 Q5T0Z8 Q5T0Z8 Uncharacterized protein C6orf132 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5540.5750.4 14.57 11.2 2.607 3 1 1 0 583.5619 2251.2559 S275s TMT10 268 (R) QAEATRAsPPRSPAEPK (G) QAEAT(0.0)RAS(0.99)PPRS(0.0)PAEPK K:TMT10,s:Phosphorylated S C6orf132 124488.2 7 2 336.1 355.09 HUMAN 1 5.2811 14.8613 QAEDERESTDDESNP-p Q14669-3;S1424-p QAEDERESTDDESNP 0.938121433931205 0.920405522725287 0.0116666666666667 0.011 0.540190568672792 0.507072717062888 0.0116666666666667 0.011 0.883041151671013 0.889800669728595 0.15419853996847 0.145196525680093 Q14669 TRIP12 Q14669.3.S1424.p_TRIP12 Q14669-3_S1424sT1425t_2_2_1424_1425 Q14669-3 Q14669-3|Q14669-2|Q14669-4 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18480.18480.3 11.32 11.32 11.321 4 2 2 0 971.4098 2752.2859 S1424s T1425t TMT10 1413 (R) QFSIQAEDEREstDDESNPLGR (A) QFS(0.0)IQAEDERES(0.99)T(0.99)DDES(0.0)NPLGR s:Phosphorylated S,t:Phosphorylated T TRIP12 227456.1 2 24 234.1 420.47 HUMAN 1 0.5402 0.5071 QAEERYESQEPLAGQ-p Q9C0C2;S592-p QAEERYESQEPLAGQ 0.94478758147709 0.292630268140428 0.012 0.129333333333333 0.486403698660712 7.04526283477943 0.012 0.129333333333333 0.894045517592852 0.197457537460107 0.139572599385064 1.46852557639323 Q9C0C2 TNKS1BP1 Q9C0C2.S592.p_TNKS1BP1 Q9C0C2_S592s _1_1_592_592 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22661.22661.3 14.36 14.36 7.803 4 1 1 0 799.0639 2315.2081 S592s TMT10 590 (R) YEsQEPLAGQESPLPLATR (E) Y(0.0)ES(0.99)QEPLAGQES(0.0)PLPLAT(0.0)R s:Phosphorylated S TNKS1BP1 182819.3 2 18 4.1 2105.7 HUMAN 1 0.4864 7.0453 QAEHQPESPLNETQR-p Q06418;S869-p QAEHQPESPLNETQR 0.93707060991058 0.0320849526179946 0.013 -0.271333333333333 0.547938750891033 20.1607147215172 0.013 -0.271333333333333 0.881467135803869 0.00963670418647382 0.156293668670681 -3.90983050417758 Q06418 TYRO3 Q06418.S869.p_TYRO3 Q06418_S869s _1_1_869_869 Q06418 Q06418|H0YNK6 Tyrosine-protein kinase receptor TYRO3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20445.20445.4 17.78 17.78 3.628 4 1 1 0 843.1661 3289.6651 S869s TMT10 849 (R) YILTPGGLAEQPGQAEHQPEsPLNETQR (L) Y(0.0)ILT(0.0)PGGLAEQPGQAEHQPES(0.99)PLNET(0.0)QR s:Phosphorylated S TYRO3 97987.6 2 2 4014.1 39.06 HUMAN 1 0.5479 -20.1607 QAELGRLSPRAYTAP-p P41182;S404-p QAELGRLSPRAYTAP 0.255264993053251 0.0182244938667557 0.163333333333333 0.337666666666667 11.2797037623538 23.9412567731325 0.163333333333333 0.337666666666667 0.074478277472908 0.00403528601870185 2.20518548303096 4.77489793638594 P41182 BCL6 P41182.S404.p_BCL6 P41182_S404s _1_1_404_404 P41182 P41182|P41182-2 B-cell lymphoma 6 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24852.24852.5 15.49 15.49 3.295 2 1 1 0 703.9815 3435.9113 S404s TMT10 380 (K) FIVLNSLNQNAKPEGPEQAELGRLsPR (A) FIVLNS(0.0)LNQNAKPEGPEQAELGRLS(0.99)PR K:TMT10,s:Phosphorylated S BCL6 80670.9 6 10 557.1 273.04 HUMAN 1 11.2797 23.9413 QAELPNRSPGFGIKK-p F8VU11;S853-p QAELPNRSPGFGIKK 0.224767265517543 0.0110382865087685 -0.226 0.526 12.453322803711 27.4147614136658 -0.226 0.526 0.0568417865744413 0.00181352630198295 -2.41300926901764 5.67453595419542 F8VU11 PRPF40B F8VU11.S853.p_PRPF40B F8VU11_S853s _1_1_853_853 F8VU11 F8VU11|Q6NWY9|Q6NWY9-3|Q6NWY9-2 PRP40 pre-mRNA processing factor 40 homolog B (Yeast), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15177.15177.5 13.7 10.75 99 1 1 1 0 808.2379 3957.1964 S853s TMT10 835 (K) EQEQDKDRELQQAELPNRsPGFGIKK (E) EQEQDKDRELQQAELPNRS(1.0)PGFGIKK K:TMT10,s:Phosphorylated S PRPF40B 101691.8 9 3 1236.1 163.46 HUMAN 1 -12.4533 27.4148 QAEMRAVTPENHESM-p Q86UW6;T1210-p QAEMRAVTPENHESM 0.907351813968267 0.501096957118514 -0.0173333333333333 0.115 0.829073431682934 4.01671925400995 -0.0173333333333333 0.115 0.826214203772786 0.396577503579957 -0.230436069798859 0.920167825660408 Q86UW6 N4BP2 Q86UW6.T1210.p_N4BP2 Q86UW6_T1210t _1_1_1210_1210 Q86UW6 Q86UW6|Q86UW6-2 NEDD4-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26404.26404.4 12.06 12.06 1.212 5 1 1 0 706.8653 2744.4693 T1210t TMT10 1208 (R) AVtPENHESMTSIFPSAAVGLK (N) AVT(0.99)PENHES(0.0)MT(0.0)S(0.0)IFPS(0.0)AAVGLK K:TMT10,t:Phosphorylated T N4BP2 200566.4 4 9 1216.1 165.62 HUMAN 1 -0.8291 4.0167 QAETPGHTPSLRWDE-p O75533;T227-p QAETPGHTPSLRWDE 0.421053324853859 0.386904340144885 0.129666666666667 0.0856666666666667 6.92590608803072 5.4820418130699 0.129666666666667 0.0856666666666667 0.202959503218153 0.283006114435124 1.44803713156541 1.19144642078039 O75533 SF3B1 O75533.T227.p_SF3B1 O75533_T223tT227t_2_2_223_227 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15291.15291.4 17.16 17.16 1.547 5 2 2 0 657.8193 2468.3298 T223t T227t TMT10 214 (K) KLSSWDQAEtPGHtPSLR (W) KLS(0.0)S(0.0)WDQAET(0.99)PGHT(0.99)PS(0.0)LR K:TMT10,t:Phosphorylated T SF3B1 146569.5 15 36 53.1 735.77 HUMAN 1 6.9259 5.482 QAFELILSPRSKESV-p P16949;S25-p QAFELILSPRSKESV 0.93956059197405 0.00714231278100688 -0.0166666666666667 -0.48 0.528736194881398 30.7131125387608 -0.0166666666666667 -0.48 0.885373217620021 0.000848572095161031 -0.151095855833508 -6.64120056007292 P16949 STMN1 P16949.S25.p_STMN1 P16949_S25s _1_1_25_25 P16949 P16949-2 Stathmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20463.20463.3 21.36 16.98 17.15 2 1 1 0 618.6659 1774.0173 S25s TMT10 14 (K) RASGQAFELILsPR (S) RAS(0.0)GQAFELILS(0.99)PR s:Phosphorylated S STMN1 17302.2 14 3 690.1 243.18 HUMAN 1 -0.5287 -30.7131 QAFNKVPSPHETKPD-p Q96JQ2;S585-p QAFNKVPSPHETKPD 0.189011352569334 0.322588235363071 0.226333333333333 -0.122666666666667 14.1675763971339 6.49682881501203 0.226333333333333 -0.122666666666667 0.038303844027084 0.224035643253524 2.72373798579833 -1.37226295680278 Q96JQ2 CLMN Q96JQ2.S585.p_CLMN Q96JQ2_S585s _1_1_585_585 Q96JQ2 Q96JQ2 Calmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25326.25326.5 16.49 16.49 2 6 1 1 0 1072.7273 5279.6579 S585s TMT10 566 (K) FNSDLIDFASTSQAFNKVPsPHETKPDEDAEAFENHAEK (L) FNS(0.0)DLIDFAS(0.0)T(0.0)S(0.0)QAFNKVPS(0.99)PHET(0.0)KPDEDAEAFENHAEK K:TMT10,s:Phosphorylated S CLMN 112105.2 1 9 726.1 236.61 HUMAN 1 14.1676 -6.4968 QAFQMRRSLPPDDIQ-p Q9UPW0;S606-p QAFQMRRSLPPDDIQ 0.358516264962328 0.367544973647585 -0.197666666666667 0.160333333333333 8.2767302273277 5.76501363480748 -0.197666666666667 0.160333333333333 0.148705481405812 0.265154276839689 -1.68313497636575 1.24230253989904 Q9UPW0 FOXJ3 Q9UPW0.S606.p_FOXJ3 Q9UPW0_S606s _1_1_606_606 Q9UPW0 Q9UPW0 Forkhead box protein J3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37718.37718.2 8.63 8.63 8.627 2 1 1 0 1143.5129 2206.0389 S606s TMT10 606 (R) sLPPDDIQDDFDWDSIV (-) S(0.99)LPPDDIQDDFDWDS(0.0)IV s:Phosphorylated S FOXJ3 69472.6 1 7 1390.1 147.2 HUMAN 1 -8.2767 5.765 QAGDDRDSGGPVLQF-p P56182;S291-p QAGDDRDSGGPVLQF 0.135751388927276 0.172135047976879 0.282 0.171333333333333 17.7886014638598 10.0457838068425 0.282 0.171333333333333 0.0166394839683137 0.0989513262185123 3.41960800938657 1.98885738297571 P56182 RRP1 P56182.S291.p_RRP1 P56182_S291s _1_1_291_291 P56182 P56182 Ribosomal RNA processing protein 1 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21448.21448.4 22.3 22.3 15.25 2 1 1 0 901.1553 3521.6254 S291s TMT10 276 (R) AEPEAGEEQAGDDRDsGGPVLQFDYEAVANR (L) AEPEAGEEQAGDDRDS(0.99)GGPVLQFDY(0.0)EAVANR s:Phosphorylated S RRP1 53066.5 1 1 3817.1 42.52 HUMAN 1 17.7886 10.0458 QAGDGAQTPKEEKAQ-p Q9BRZ2;T418-p QAGDGAQTPKEEKAQ 0.222983311009967 0.382266159009429 0.360333333333333 0.118666666666667 12.5306537204452 5.54835742780371 0.360333333333333 0.118666666666667 0.0558386137507482 0.278717512416047 2.42682710222746 1.20339976973229 Q9BRZ2 TRIM56 Q9BRZ2.T418.p_TRIM56 Q9BRZ2_T418t _1_1_418_418 Q9BRZ2 Q9BRZ2 E3 ubiquitin-protein ligase TRIM56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7634.7634.3 19.93 15.42 99 1 1 1 0 898.1341 2612.4247 T418t TMT10 405 (R) QGGVQPQAGDGAQtPKEEK (A) QGGVQPQAGDGAQT(1.0)PKEEK K:TMT10,t:Phosphorylated T TRIM56 83197.9 2 2 1098.1 178.07 HUMAN 1 12.5307 5.5484 QAGFSSRSQGLSGDK-p Q9Y446-2;S110-p QAGFSSRSQGLSGDK 0.0412311366109555 0.037278785698122 1.28733333333333 -0.591666666666667 30.8995579367153 19.2002827911743 1.28733333333333 -0.591666666666667 0.000812913257444728 0.0120218615162823 6.71055406614563 -3.70609316509843 Q9Y446 PKP3 Q9Y446.2.S110.p_PKP3 Q9Y446-2_S110s _1_1_110_110 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7554.7554.2 12.88 3.81 4.271 2 1 1 0 665.3444 1249.7152 S110s TMT10 110 (R) sQGLSGDK (T) S(0.99)QGLS(0.0)GDK K:TMT10,s:Phosphorylated S PKP3 89109.7 2 2 454.1 307.47 HUMAN 1 30.8996 -19.2003 QAGGRRISLDQQ___-p Q96PM5;S257-p QAGGRRISLDQQ___ 0.625352013405258 0.23040232605825 0.103 0.234 3.78622461777589 8.3964594782235 0.103 0.234 0.418193750309417 0.144661862467885 0.876039154799889 1.70330736447032 Q96PM5 RCHY1 Q96PM5.S257.p_RCHY1 Q96PM5_S257s _1_1_257_257 Q96PM5 Q96PM5|Q96PM5-2|Q96PM5-6|Q96PM5-7|Q96PM5-8 RING finger and CHY zinc finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10221.10221.2 7.42 7.42 99 1 1 1 0 584.8002 1088.6261 S257s TMT10 255 (R) RIsLDQQ (-) RIS(1.0)LDQQ s:Phosphorylated S RCHY1 31764.5 1 1 7167.1 7.42 HUMAN 1 3.7862 8.3965 QAGSLSGSPKPFSPQ-p Q9ULU4-19;S517-p QAGSLSGSPKPFSPQ 0.457143535511579 0.198772906970298 -0.117666666666667 0.14 6.2633608797267 9.23262686447889 -0.117666666666667 0.14 0.236408948873914 0.119326612969601 -1.33134659101579 1.847955781383 Q9ULU4 ZMYND8 Q9ULU4.19.S517.p_ZMYND8 Q9ULU4-19_S517s _1_1_517_517 Q9ULU4-19 Q9ULU4|Q9ULU4-20|Q9ULU4-5|Q9ULU4-9|Q9ULU4-16|Q9ULU4-22|A0A087WYS3|Q9ULU4-17|Q9ULU4-6|Q9ULU4-3|A0A087WV57|Q9ULU4-4|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-21|Q9ULU4-8|Q9ULU4-23|Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-10|Q9ULU4-13 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21897.21897.3 19.2 19.2 1.18 8 1 1 0 1075.5891 3144.7872 S517s TMT10 508 (K) TGQAGSLSGsPKPFSPQLSAPITTK (T) T(0.0)GQAGS(0.0)LS(0.0)GS(0.99)PKPFS(0.0)PQLS(0.0)APIT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S ZMYND8 139738.7 16 8 57.1 712.18 HUMAN 1 -6.2634 9.2326 QAISPKQSPSSSPTR-p P49585;S319-p QAISPKQSPSSSPTR 0.080291775209528 0.0863352608970145 -0.415666666666667 -0.227333333333333 23.3890748611442 14.0831794758644 -0.415666666666667 -0.227333333333333 0.00458239490995883 0.039055486535043 -4.64701150575807 -2.70656787628362 P49585 PCYT1A P49585.S319.p_PCYT1A P49585_S319s _1_1_319_319 P49585 C9JEJ2|P49585 Choline-phosphate cytidylyltransferase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16300.16300.3 13.96 13.96 1.435 6 1 1 0 785.0832 2273.2688 S319s TMT10 310 (R) MLQAISPKQsPSSSPTR (E) MLQAIS(0.0)PKQS(0.99)PS(0.0)S(0.0)S(0.0)PT(0.0)R K:TMT10,s:Phosphorylated S PCYT1A 42072.6 1 6 694.1 242.25 HUMAN 1 -23.3891 -14.0832 QAIVLCISPSKPNPV-p Q16656-4;S136-p QAIVLCISPSKPNPV 0.77005747990449 0.546386054441739 -0.041 0.0736666666666667 2.17391550482843 3.53067871335889 -0.041 0.0736666666666667 0.606189555793656 0.443539322399623 -0.546981461812642 0.82615521563436 Q16656 NRF1 Q16656.4.S136.p_NRF1 Q16656-4_S136s _1_1_136_136 Q16656-4 Q16656-4|Q16656-2 Isoform 4 of Nuclear respiratory factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26756.26756.5 22.48 20.56 1.704 2 1 1 0 590.7386 2869.6941 S136s TMT10 126 (R) VGQQAIVLCIsPSKPNPVFK (V) VGQQAIVLCIS(0.99)PS(0.0)KPNPVFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NRF1 55843.7 4 1 4703.1 27.73 HUMAN 1 -2.1739 3.5307 QAKAPFHTPPEEPNE-p Q9UBU7;T553-p QAKAPFHTPPEEPNE 0.430275482317801 0.0242708001095123 0.119666666666667 -0.359333333333333 6.7445259546843 22.0067585987488 0.119666666666667 -0.359333333333333 0.21161546571961 0.00629976196608383 1.41621547513203 -4.31890607957236 Q9UBU7 DBF4 Q9UBU7.T553.p_DBF4 Q9UBU7_T553t _1_1_553_553 Q9UBU7 Q9UBU7 Protein DBF4 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16760.16760.3 17.1 17.1 99 1 1 1 0 818.3792 2373.1586 T553t TMT10 549 (K) APFHtPPEEPNECDFK (N) APFHT(1.0)PPEEPNECDFK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T DBF4 77598.3 2 6 880.1 207.32 HUMAN 1 6.7445 -22.0068 QAKDAHLSPKRPWKE-p O60503;S1307-p QAKDAHLSPKRPWKE 0.560646744079127 0.0743238715153681 -0.100333333333333 -0.306666666666667 4.63135837188409 14.9830048117361 -0.100333333333333 -0.306666666666667 0.344242242975471 0.0317467680420443 -1.03604762550839 -2.87339191560431 O60503 ADCY9 O60503.S1307.p_ADCY9 O60503_S1307s _1_1_1307_1307 O60503 O60503 Adenylate cyclase type 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7178.7178.3 12.45 8.76 99 1 1 1 0 435.9039 1225.7305 S1307s TMT10 1303 (K) DAHLsPK (R) DAHLS(1.0)PK K:TMT10,s:Phosphorylated S ADCY9 152923.1 7 15 658.1 252.1 HUMAN 1 -4.6314 -14.983 QAKGAEASAASEEEA-p P49006;S162-p QAKGAEASAASEEEA 0.715980160945873 0.0246924727317736 0.0826666666666667 0.296666666666667 2.73715770919409 21.880497664506 0.0826666666666666 0.296666666666667 0.532456617694102 0.00648560109822313 0.666501031737048 4.29015058862405 P49006 MARCKSL1 P49006.S162.p_MARCKSL1 P49006_S162s _1_1_162_162 P49006 P49006 MARCKS-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13862.13862.4 16.27 10.86 1.352 9 1 1 0 984.4275 3854.7162 S162s TMT10 158 (K) GAEAsAASEEEAGPQATEPSTPSGPESGPTPASAEQNE (-) GAEAS(0.99)AAS(0.0)EEEAGPQAT(0.0)EPS(0.0)T(0.0)PS(0.0)GPES(0.0)GPT(0.0)PAS(0.0)AEQNE s:Phosphorylated S MARCKSL1 19585.5 1 12 402.1 327.42 HUMAN 1 2.7372 21.8805 QAKHKGYSPPESRKS-p Q14669-3;S45-p QAKHKGYSPPESRKS 0.259805946096148 0.183929338943457 0.429666666666667 -0.266 11.1034462782504 9.66957987711978 0.429666666666667 -0.266 0.077563138179224 0.107905110120517 2.17424222421648 -1.92360885182982 Q14669 TRIP12 Q14669.3.S45.p_TRIP12 Q14669-3_S45s _1_1_45_45 Q14669-3 Q14669-3|G5E9G6 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.4097.4097.4 11.3 11.3 4.294 3 1 1 0 424.7206 1615.8957 S45s TMT10 41 (K) HKGYsPPESR (K) HKGY(0.0)S(0.99)PPES(0.0)R K:TMT10,s:Phosphorylated S TRIP12 227456.1 7 1 234.1 420.47 HUMAN 1 11.1034 -9.6696 QAKPGHVSPLQLTNI-p P22670;S159-p QAKPGHVSPLQLTNI 0.754445686240657 0.0571167531357699 0.043 0.240333333333333 2.33853495705397 16.5665826760309 0.043 0.240333333333333 0.583641956032188 0.0220466055738593 0.582533102431869 3.17540740104099 P22670 RFX1 P22670.S159.p_RFX1 P22670_S159s _1_1_159_159 P22670 P22670 MHC class II regulatory factor RFX1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27301.27301.4 24.68 24.68 2.79 5 1 1 0 1032.8337 4048.3435 S159s TMT10 145 (R) LLVQTSVQAKPGHVsPLQLTNIQVPQQALPTQR (L) LLVQT(0.0)S(0.0)VQAKPGHVS(0.99)PLQLT(0.0)NIQVPQQALPT(0.0)QR K:TMT10,s:Phosphorylated S RFX1 105098.2 5 2 1675.1 121.84 HUMAN 1 2.3385 16.5666 QAKTHTDSSEKELEP-p Q9H3P7;S344-p QAKTHTDSSEKELEP 0.934954648593012 0.864835758469674 -0.0143333333333333 -0.028 0.574309838802508 0.889064545611783 -0.0143333333333333 -0.028 0.876130937346648 0.814879787236751 -0.163402625646211 -0.245791309762024 Q9H3P7 ACBD3 Q9H3P7.S344.p_ACBD3 Q9H3P7_S344sS345s_2_2_344_345 Q9H3P7 Q9H3P7 Golgi resident protein GCP60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20655.20655.4 13.95 13.95 1.169 4 2 2 0 865.4133 3298.6894 S344s S345s TMT10 340 (K) THTDssEKELEPEAAEEALENGPK (E) T(0.0)HT(0.0)DS(0.99)S(0.99)EKELEPEAAEEALENGPK K:TMT10,s:Phosphorylated S ACBD3 60877.6 1 5 2173.1 94.52 HUMAN 1 -0.5743 -0.8891 QALAKQGSLYHEMAI-p Q9BST9;S448-p QALAKQGSLYHEMAI 0.144819212418458 0.0345977622748229 0.67 -0.316 17.1305300847891 19.6796030650583 0.67 -0.316 0.0193618562541822 0.0107656360451476 3.28838819058709 -3.80703485711047 Q9BST9 RTKN Q9BST9.S448.p_RTKN Q9BST9_S448s_1_1_448_448 Q9BST9 Q9BST9|Q9BST9-2|Q9BST9-3 Rhotekin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37171.37171.4 15.09 15.09 2.797 4 1 1 0 806.9036 3128.6135 S448s M453m TMT10 446 (K) QGsLYHEmAIEPLDDIAAVTDILTQR (E) QGS(0.99)LY(0.0)HEM(1.0)AIEPLDDIAAVT(0.0)DILT(0.0)QR s:Phosphorylated S,m:Oxidized methionine RTKN 63465.1 2 6 1486.1 137.99 HUMAN 1 17.1305 -19.6796 QALAPGLSPSQRPGG-p Q9BWK5;S123-p QALAPGLSPSQRPGG 0.0722280012258328 0.0145497038675128 -0.551666666666667 -0.755666666666667 24.5538576815794 25.4551273595174 -0.551666666666667 -0.755666666666667 0.00350440452019478 0.00284765428974265 -4.93166287638119 -5.15339258011767 Q9BWK5 C7orf49 Q9BWK5.S123.p_C7orf49 Q9BWK5_S123s _1_1_123_123 Q9BWK5 Q9BWK5|Q9BWK5-2 Cell cycle regulator of non-homologous end joining HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11121.11121.3 16.39 16.39 2 6 1 1 0 827.4017 2400.2251 S123s TMT10 116 (K) QALAPGLsPSQRPGGSSSACSR (S) QALAPGLS(0.99)PS(0.0)QRPGGS(0.0)S(0.0)S(0.0)ACS(0.0)R C:Carbamidomethylation,s:Phosphorylated S CYREN 17056.9 1 1 4622.1 28.68 HUMAN 1 -24.5539 -25.4551 QALEEENSAILHRFN-p Q8IZD2;S829-p QALEEENSAILHRFN 0.313179859530122 0.329957065590237 0.268333333333333 -0.204333333333333 9.43136963816945 6.37615735940176 0.268333333333333 -0.204333333333333 0.113989024272219 0.230347903586343 1.88306536528338 -1.35096677707179 Q8IZD2 KMT2E Q8IZD2.S829.p_KMT2E Q8IZD2_S829s _1_1_829_829 Q8IZD2 Q8IZD2|Q8IZD2-7 Histone-lysine N-methyltransferase 2E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15958.15958.4 10.21 10.21 1.165 2 1 1 0 710.0872 2757.3576 S829s TMT10 822 (K) QALEEENsAILHRFNSPCQER (S) QALEEENS(0.99)AILHRFNS(0.0)PCQER C:Carbamidomethylation,s:Phosphorylated S KMT2E 207015.2 1 3 544.1 275.86 HUMAN 1 9.4314 -6.3762 QALERKNSAIPSELN-p Q96CV9;S342-p QALERKNSAIPSELN 0.294305276064614 0.0132385189767506 -0.198 0.776666666666667 10.0234249627551 26.134740257576 -0.198 0.776666666666667 0.0994620723400242 0.00243515143689865 -1.9857804728276 5.32998326914083 Q96CV9 OPTN Q96CV9.S342.p_OPTN Q96CV9_S342s _1_1_342_342 Q96CV9 Q96CV9|Q96CV9-2|Q96CV9-3 Optineurin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14185.14185.3 12.18 9.23 3.788 2 1 1 0 699.7231 2017.1897 S342s TMT10 340 (R) KNsAIPSELNEK (Q) KNS(0.99)AIPS(0.0)ELNEK K:TMT10,s:Phosphorylated S OPTN 66319.4 2 7 2419.1 84.3 HUMAN 1 -10.0234 26.1347 QALGIRNT_______-p Q96GM5;T515-p QALGIRNT_______ 0.0898915602568078 0.101540977942331 0.34 0.191666666666667 22.2801245355023 13.1260417900698 0.34 0.191666666666667 0.00591544671176385 0.048685072490474 4.38628227080272 2.53239841275807 Q96GM5 SMARCD1 Q96GM5.T515.p_SMARCD1 Q96GM5_T515t _1_1_515_515 Q96GM5 Q96GM5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17148.17148.3 10.65 10.65 99 1 1 1 0 612.9889 1756.9867 T515t TMT10 503 (R) RQELEQALGIRNt (-) RQELEQALGIRNT(1.0) t:Phosphorylated T SMARCD1 58516.8 1 1 6605.1 10.65 HUMAN 1 22.2801 13.126 QALLGQLSQDDLCKF-p P0DMW2;S19-p QALLGQLSQDDLCKF 0.0860896794834836 0.0124943875935368 -0.428 -0.495 22.8000119971484 26.5559506345493 -0.428 -0.495 0.00524806010499765 0.0022100644386002 -4.50730884097052 -5.44160650789392 P0DMW2 NotFound P0DMW2.S19.p_NotFound P0DMW2_S19s_1_1_19_19 P0DMW2 P0DMW2 NLR family pyrin domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37510.37510.4 7.93 3.62 5.645 3 1 1 0 838.1727 3252.7009 M1m N10n S19s TMT10 1 (-) mVSSAQLDFnLQALLGQLsQDDLCK (F) M(1.0)VS(0.0)S(0.0)AQLDFN(1.0)LQALLGQLS(0.99)QDDLCK C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,n:Deamidated,s:Phosphorylated S NLRP2B 5049.7 1 1 7062.1 7.93 HUMAN 1 -22.8 -26.556 QALNRCVSCLPGQRD-p Q9Y490;S1201-p QALNRCVSCLPGQRD 0.0211572678163944 0.993300231452567 -1.04666666666667 -0.00133333333333331 38.9774271642468 0.0407772741957586 -1.04666666666667 -0.0013333333333333 0.000126548582117388 0.990654627606673 -9.70247295893681 -0.0122626538597884 Q9Y490 TLN1 Q9Y490.S1201.p_TLN1 Q9Y490_S1201s _1_1_1201_1201 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10059.10059.2 11.68 9.21 99 1 1 1 0 693.3172 1305.6605 S1201s TMT10 1199 (R) CVsCLPGQR (D) CVS(1.0)CLPGQR C:Carbamidomethylation,s:Phosphorylated S TLN1 271930.4 1 16 267.1 395.2 HUMAN 1 -38.9774 -0.0408 QALPKPASPKKPPPG-p Q9UQ35;S2664-p QALPKPASPKKPPPG 0.325038366971884 0.0090322518183777 -0.411333333333333 0.646666666666667 9.14130496963899 28.9324830441117 -0.411333333333333 0.646666666666667 0.12186233715116 0.00127865003715423 -1.83282630958234 6.10456503227172 Q9UQ35 SRRM2 Q9UQ35.S2664.p_SRRM2 Q9UQ35_S2664s _1_1_2664_2664 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13661.13661.4 13.51 13.51 99 1 1 1 0 514.5545 1975.2307 S2664s TMT10 2654 (K) PGPQALPKPAsPK (K) PGPQALPKPAS(1.0)PK K:TMT10,s:Phosphorylated S SRRM2 300351.7 5 162 2.1 3310.34 HUMAN 1 -9.1413 28.9325 QALPQLETPPNPSAL-p Q9P1Y5;T97-p QALPQLETPPNPSAL 0.265419473261086 0.353541651009375 0.163333333333333 0.122333333333333 10.9210879673651 5.98740618992669 0.163333333333333 0.122333333333333 0.0808893234921853 0.251918105147219 2.14229025874113 1.28201538175658 Q9P1Y5 CAMSAP3 Q9P1Y5.T97.p_CAMSAP3 Q9P1Y5_T97t _1_1_97_97 Q9P1Y5 Q9P1Y5-2 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37757.37757.3 21.15 21.15 7.775 2 1 1 0 841.469 2442.4282 T97t TMT10 90 (R) QALPQLEtPPNPSALLALLAR (R) QALPQLET(0.99)PPNPS(0.0)ALLALLAR t:Phosphorylated T CAMSAP3 135546 1 1 217.1 432.4 HUMAN 1 10.9211 5.9874 QALPREQSPPPPLQT-p Q8WYQ5;S35-p QALPREQSPPPPLQT 0.674369074906952 0.160990496583212 0.0566666666666667 0.196666666666667 3.20754133017538 10.4308727432624 0.0566666666666667 0.196666666666667 0.477799693676792 0.0905550606275207 0.762260062444929 2.0558053721971 Q8WYQ5 DGCR8 Q8WYQ5.S35.p_DGCR8 Q8WYQ5_S35s _1_1_35_35 Q8WYQ5 Q8WYQ5|Q8WYQ5-3|Q8WYQ5-2 Microprocessor complex subunit DGCR8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36302.36302.5 28.39 25.87 3.811 9 1 1 0 1027.0867 5051.4508 S35s TMT10 33 (R) EQsPPPPLQTSSGAEVMDVGSGGDGQSELPAEDPFNFYGASLLSK (G) EQS(0.99)PPPPLQT(0.0)S(0.0)S(0.0)GAEVMDVGS(0.0)GGDGQS(0.0)ELPAEDPFNFY(0.0)GAS(0.0)LLS(0.0)K K:TMT10,s:Phosphorylated S DGCR8 86842.3 14 2 1117.1 175.44 HUMAN 1 3.2075 10.4309 QALQDLLSEYMGNAG-p P35221;S349-p QALQDLLSEYMGNAG 0.379428696596803 0.961653000540495 0.122333333333333 0.00866666666666666 7.77379365327559 0.243636035104885 0.122333333333333 0.00866666666666667 0.166963151902097 0.945445276638182 1.59589367871875 0.0716551167292025 P35221 CTNNA1 P35221.S349.p_CTNNA1 P35221_S349s _1_1_349_349 P35221 P35221-2|G3XAM7 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32992.32992.3 14.68 14.68 4.315 2 1 1 0 692.3334 1995.0167 S349s TMT10 342 (R) QALQDLLsEYMGNAGR (K) QALQDLLS(0.99)EY(0.0)MGNAGR s:Phosphorylated S CTNNA1 100754.2 1 7 169.1 491.55 HUMAN 1 7.7738 0.2436 QALRAAWSPYEDAVP-p Q8NEG4;S72-p QALRAAWSPYEDAVP 0.21511781851997 0.917970015180759 0.198333333333333 -0.0106666666666666 12.8578578601711 0.52363061864953 0.198333333333333 -0.0106666666666666 0.0517862202385545 0.88641467652583 2.48548494341291 -0.149696829752557 Q8NEG4 FAM83F Q8NEG4.S72.p_FAM83F Q8NEG4_S72s _1_1_72_72 Q8NEG4 Q8NEG4 Protein FAM83F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20165.20165.3 13.88 13.88 4.764 2 1 1 0 666.6508 1917.9656 S72s TMT10 69 (R) AAWsPYEDAVPAANAR (G) AAWS(0.99)PY(0.0)EDAVPAANAR s:Phosphorylated S FAM83F 55827.1 1 3 3233.1 56.46 HUMAN 1 12.8579 -0.5236 QALSEVASSLQSSAP-p Q86TV6-2;S694-p QALSEVASSLQSSAP 0.252409750747624 0.0344283897165834 0.188 0.272333333333333 11.4045900070246 19.7137133925301 0.188 0.272333333333333 0.0723670716734675 0.0106814118497286 2.22714813873774 3.81427364244756 Q86TV6 TTC7B Q86TV6.2.S694.p_TTC7B Q86TV6-2_S694sS695s_2_2_694_695 Q86TV6-2 Q86TV6-2 Isoform 2 of Tetratricopeptide repeat protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25160.25160.3 12.04 12.04 1.306 5 2 2 0 817.0763 2289.2702 S694s S695s TMT10 685 (R) VEQALSEVAssLQSSAPK (Q) VEQALS(0.0)EVAS(0.99)S(0.99)LQS(0.0)S(0.0)APK K:TMT10,s:Phosphorylated S TTC7B 96901.3 3 7 2074.1 99.01 HUMAN 1 11.4046 19.7137 QALSHVASLKGGPLC-p A6NNA5;S173-p QALSHVASLKGGPLC 0.404577762556746 0.447259642779401 0.341666666666667 0.257666666666667 7.25685408503027 4.65712350615916 0.341666666666667 0.257666666666667 0.188067863763705 0.342206023242719 1.50590348539833 1.04063379069661 A6NNA5 DRGX A6NNA5.S173.p_DRGX A6NNA5_S173s _1_1_173_173 A6NNA5 A6NNA5 Dorsal root ganglia homeobox protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32805.32805.5 7.43 4.19 1.329 8 1 1 0 805.8172 3945.1349 S173s TMT10 142 (R) TVGPAGPFFPSCLPGTLLNTATYAQALSHVAsLK (G) T(0.0)VGPAGPFFPS(0.0)CLPGT(0.0)LLNT(0.0)AT(0.0)Y(0.0)AQALS(0.0)HVAS(0.99)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DRGX 29014.1 1 1 7156.1 7.43 HUMAN 1 7.2569 4.6571 QALSSEASVDEGGVF-p Q96EX2;S39-p QALSSEASVDEGGVF 0.208993010347482 0.669142598842321 -0.284333333333333 -0.0416666666666667 13.1212793936885 2.38439441847154 -0.284333333333333 -0.0416666666666667 0.0487384889612501 0.577511395462035 -2.53294396269869 -0.592267225407026 Q96EX2 RNFT2 Q96EX2.S39.p_RNFT2 Q96EX2_S39s _1_1_39_39 Q96EX2 Q96EX2|Q96EX2-5|Q96EX2-2|F8W6L4 RING finger and transmembrane domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24729.24729.3 16.94 16.94 3.671 5 1 1 0 860.0966 2498.3026 S39s TMT10 31 (R) SQALSSEAsVDEGGVFESLK (A) S(0.0)QALS(0.0)S(0.0)EAS(0.99)VDEGGVFES(0.0)LK K:TMT10,s:Phosphorylated S RNFT2 49933.8 1 1 5714.1 16.94 HUMAN 1 -13.1213 -2.3844 QALVGSDSAEDEKRK-p O43159;S126-p QALVGSDSAEDEKRK 0.13388318606211 0.0750180027556397 -0.271 -0.246666666666667 17.9815363608432 14.9292538620979 -0.271 -0.246666666666667 0.0159164556665883 0.0321421270773835 -3.4585295765247 -2.86333553191056 O43159 RRP8 O43159.S126.p_RRP8 O43159_S126s _1_1_126_126 O43159 O43159|E9PPY3 Ribosomal RNA-processing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12245.12245.2 15.93 15.93 1.275 2 1 1 0 943.9608 1806.9485 S126s TMT10 119 (K) QALVGSDsAEDEK (R) QALVGS(0.0)DS(0.99)AEDEK K:TMT10,s:Phosphorylated S RRP8 51455.6 2 3 986.1 191.95 HUMAN 1 -17.9815 -14.9293 QAMIRQRSEPFFPNI-p Q8NEZ4-3;S3080-p QAMIRQRSEPFFPNI 0.387197491638052 0.0323164429347562 0.186666666666667 0.358333333333333 7.62216720510457 20.1145187764189 0.186666666666667 0.358333333333333 0.172895336606633 0.00973975701530235 1.56953945184607 3.89989454929223 Q8NEZ4 KMT2C Q8NEZ4.3.S3080.p_KMT2C Q8NEZ4-3_S3080s _1_1_3080_3080 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.35107.35107.4 18.99 19.64 10.025 2 1 1 0 755.6315 2939.5377 S3080s TMT10 3078 (R) QRsEPFFPNIDFDAITDPIMK (A) Q(0.0)RS(0.99)EPFFPN(0.0)IDFDAIT(0.0)DPIM(0.0)K K:TMT10,s:Phosphorylated S KMT2C 554869.1 1 16 88.1 626.31 HUMAN 1 7.6222 20.1145 QAMVRRESVVNLENF-p Q9UIK4;S299-p QAMVRRESVVNLENF 0.580132943065601 0.196176012213239 -0.097 0.403333333333333 4.34819201624825 9.3036111157939 -0.097 0.403333333333333 0.367435233289011 0.11739210452429 -0.98312870115018 1.86023906246592 Q9UIK4 DAPK2 Q9UIK4.S299.p_DAPK2 Q9UIK4_S299s _1_1_299_299 Q9UIK4 Q9UIK4 Death-associated protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12742.12742.3 10.13 10.13 99 1 1 1 0 600.6514 1719.9703 S299s Hydrogen 297 (R) REsVVNLENFRK (Q) RES(1.0)VVNLENFRK K:TMT10-Lys-Only,s:Phosphorylated S DAPK2 43068.5 3 1 3135.1 59.79 HUMAN 1 -4.3482 9.3036 QANCQGLSPVSVASK-p Q9UHF7-2;S191-p QANCQGLSPVSVASK 0.652743287373897 0.110235548775255 -0.0676666666666667 -0.176 3.47374581255842 12.6451247065344 -0.0676666666666667 -0.176 0.449392084673431 0.0543860514682529 -0.815096970962227 -2.44601413597334 Q9UHF7 TRPS1 Q9UHF7.2.S191.p_TRPS1 Q9UHF7-2_S191s_1_1_191_191 Q9UHF7-2 Q9UHF7|E5RFF3|E5RJ97|Q9UHF7-2|Q9UHF7-3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15914.15914.4 28.12 28.12 2.521 7 1 1 0 1063.5159 4170.0886 N186n S191s TMT10 173 (K) ATEETGQAQSGQAnCQGLsPVSVASKNPQVPSDGGVR (L) AT(0.0)EET(0.0)GQAQS(0.0)GQAN(0.99)CQGLS(0.99)PVS(0.0)VAS(0.0)KN(0.0)PQVPS(0.0)DGGVR C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S TRPS1 145246 19 7 14.1 1150.14 HUMAN 1 -3.4737 -12.6451 QANEEWETASESSDF-p P48634;T1323-p QANEEWETASESSDF 0.718020577452312 0.0292510294762908 0.0528333333333333 0.477833333333333 2.71460454760526 20.7635666021009 0.0528333333333333 0.477833333333333 0.535228887503359 0.008387708709981 0.661824227199047 4.0408033673806 P48634 PRRC2A P48634.T1323.p_PRRC2A P48634_T1323tS1325s_2_2_1323_1325 P48634 P48634|P48634-3|P48634-2 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17911.18448.3 25.93 25.93 1.424 9 2 2 0 1217.1453 3489.5 T1323t S1325s TMT10 1306 (K) SPDLSNQNSDQANEEWEtAsESSDFTSER (R) S(0.0)PDLS(0.0)NQNS(0.0)DQANEEWET(0.99)AS(0.99)ES(0.0)S(0.0)DFT(0.0)S(0.0)ER t:Phosphorylated T,s:Phosphorylated S PRRC2A 229315.4 1 42 36.1 882.05 HUMAN 2 2.7146 20.7636 QAPAVATT_______-p P15880;T293-p QAPAVATT_______ 0.232014607791047 0.0601157292691754 0.334 -0.289333333333333 12.2036847959169 16.2672658222007 0.334 -0.289333333333333 0.0602048557833291 0.0236196478193518 2.36851553138567 -3.11742925215951 P15880 RPS2 P15880.T293.p_RPS2 P15880_T293t _1_1_293_293 P15880 P15880|E9PQD7 40S ribosomal protein S2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8480.8480.2 13.16 13.16 1.75 3 1 1 0 584.7953 1088.6149 T293t TMT10 285 (R) TQAPAVATt (-) T(0.0)QAPAVAT(0.0)T(0.99) t:Phosphorylated T RPS2 31609.1 1 7 1346.1 151.14 HUMAN 1 12.2037 -16.2673 QAPDLELSLPAIHVE-p Q09666;S5125-p QAPDLELSLPAIHVE 0.650984349045844 0.217906969082404 -0.0643333333333333 0.127 3.49761745392008 8.70767370128803 -0.0643333333333333 0.127 0.446928710673576 0.134658145736594 -0.819792088686471 1.75715098151929 Q09666 AHNAK Q09666.S5125.p_AHNAK Q09666_S5125s _1_1_5125_5125 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33859.33859.5 29.22 29.22 15.444 2 1 1 0 973.1479 4781.7515 S5125s TMT10 5102 (K) FKAEAPLPSPKLEGELQAPDLELsLPAIHVEGLDIK (A) FKAEAPLPS(0.0)PKLEGELQAPDLELS(0.99)LPAIHVEGLDIK K:TMT10,s:Phosphorylated S AHNAK 629603.7 6 119 1.1 4313.36 HUMAN 1 -3.4976 8.7077 QAPDSQASPAPAPQI-p Q9NZM4;S755-p QAPDSQASPAPAPQI 0.962553763055712 0.00656985067540211 -0.014 0.5 0.320886486530671 31.3840100235002 -0.014 0.5 0.928776784521364 0.000727108124994918 -0.0936239533283007 6.85298889777637 Q9NZM4 GLTSCR1 Q9NZM4.S755.p_GLTSCR1 Q9NZM4_S755s _1_1_755_755 Q9NZM4 Q9NZM4|A0A087WWH3|Q9NZM4-2 BRD4-interacting chromatin-remodeling complex-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23503.23503.4 21.03 18.99 1.659 2 1 1 0 779.9201 3036.6882 S755s TMT10 742 (K) GAGLGPQAPDSQAsPAPAPQIPAAAPLK (G) GAGLGPQAPDS(0.0)QAS(0.99)PAPAPQIPAAAPLK K:TMT10,s:Phosphorylated S BICRA 158829.7 1 2 2101.1 97.63 HUMAN 1 -0.3209 31.384 QAPGQKRTPRRGEQQ-p Q5JVS0;T121-p QAPGQKRTPRRGEQQ 0.0778664452281409 0.0103595807553658 -0.426333333333333 -0.994333333333333 23.6886563545317 27.8618173699847 -0.426333333333333 -0.994333333333334 0.00427695188503437 0.00163613171445392 -4.71913830947423 -5.79870960820437 Q5JVS0 HABP4 Q5JVS0.T121.p_HABP4 Q5JVS0_S108sT121t_2_2_108_121 Q5JVS0 Q5JVS0|Q5JVS0-2 Intracellular hyaluronan-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13475.13475.4 8.09 8.09 8.093 3 2 2 0 839.9403 3196.8067 S108s T121t TMT10 97 (K) SLPAPVAQRPDsPGGGLQAPGQKRtPR (R) S(0.0)LPAPVAQRPDS(0.99)PGGGLQAPGQKRT(0.99)PR K:TMT10,s:Phosphorylated S,t:Phosphorylated T HABP4 45898.7 1 4 1699.1 120.32 HUMAN 1 -23.6887 -27.8618 QAPLKPKTPRGTKTP-p O94776;T534-p QAPLKPKTPRGTKTP 0.145576969720785 0.0026537781576749 -0.308333333333333 -1.01533333333333 17.0541317702599 39.1745696299844 -0.308333333333333 -1.01533333333333 0.0197054711427144 0.000120932501671065 -3.27330413347297 -9.76622018296864 O94776 MTA2 O94776.T534.p_MTA2 O94776_T534t _1_1_534_534 O94776 O94776|O94776-2 Metastasis-associated protein MTA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14872.14872.4 11.09 11.09 99 1 1 1 0 576.0964 2221.3999 T534t TMT10 523 (K) DLVAQAPLKPKtPR (G) DLVAQAPLKPKT(1.0)PR K:TMT10,t:Phosphorylated T MTA2 75763.5 1 6 2100.1 97.64 HUMAN 1 -17.0541 -39.1746 QAPRAPQSPRRPPHP-p P12270;S2073-p QAPRAPQSPRRPPHP 0.520035322117265 0.439202851388691 0.136 -0.102666666666667 5.2450050262795 4.76023087180458 0.136 -0.102666666666667 0.29888181878677 0.334177274623973 1.14877295736818 -1.05972463834068 P12270 TPR P12270.S2073.p_TPR P12270_S2073s _1_1_2073_2073 P12270 P12270 Nucleoprotein TPR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.4122.4335.4 11.34 11.34 99 1 1 1 0 503.7781 1932.1241 S2073s TMT10 2070 (R) APQsPRRPPHPLPPR (L) APQS(1.0)PRRPPHPLPPR s:Phosphorylated S TPR 267687.4 13 19 385.1 333.55 HUMAN 1 5.245 -4.7602 QAPRKSPSDTEGLVK-p O95297;S221-p QAPRKSPSDTEGLVK 0.427414948238645 0.00517709629283449 -0.130666666666667 -0.539666666666667 6.7974557279315 33.2521493000023 -0.130666666666667 -0.539666666666667 0.209052048331554 0.000472917156884252 -1.42551022210719 -7.47238930387064 O95297 MPZL1 O95297.S221.p_MPZL1 O95297_S221s _1_1_221_221 O95297 O95297|O95297-2|O95297-4 Myelin protein zero-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12866.12866.2 12.32 12.32 1.329 3 1 1 0 964.5405 1848.1045 S221s TMT10 218 (R) KSPsDTEGLVK (S) KS(0.0)PS(0.99)DT(0.0)EGLVK K:TMT10,s:Phosphorylated S MPZL1 29252.8 3 3 2618.1 76.62 HUMAN 1 -6.7975 -33.2521 QAQTKAASQILENGE-p Q8IYJ3;S216-p QAQTKAASQILENGE 0.992471133396345 0.233323515170399 -0.002 0.128333333333333 0.0707558067368351 8.32335888485079 -0.002 0.128333333333333 0.983839872291159 0.147117423877261 -0.0212079127455156 1.690654514936 Q8IYJ3 SYTL1 Q8IYJ3.S216.p_SYTL1 Q8IYJ3_S216s _1_1_216_216 Q8IYJ3 Q8IYJ3|Q8IYJ3-2|A0A087X1N4 Synaptotagmin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19656.19656.2 17.4 13.04 4.633 2 1 1 0 1238.0813 2395.1939 S216s TMT10 214 (K) AAsQILENGEEAPGPDPSLDR (M) AAS(0.99)QILENGEEAPGPDPS(0.0)LDR s:Phosphorylated S SYTL1 62141.3 3 5 1335.1 152.58 HUMAN 1 -0.0708 8.3234 QAQVDKLYAGLKELA-p O15020;Y1676-p QAQVDKLYAGLKELA 0.242838759007938 0.0430095027967312 0.484666666666667 -0.483333333333333 11.7579639052181 18.3087528084913 0.484666666666667 -0.483333333333333 0.0667119460290615 0.0147613038230739 2.28947628449052 -3.52207663010279 O15020 SPTBN2 O15020.Y1676.p_SPTBN2 O15020_Y1676y _1_1_1676_1676 O15020 O15020|O15020-2 Spectrin beta chain, non-erythrocytic 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.19605.19605.3 14.44 14.44 99 1 1 1 0 701.0718 2021.2362 Y1676y TMT10 1669 (R) QAQVDKLyAGLK (E) QAQVDKLY(1.0)AGLK K:TMT10,y:Phosphorylated Y SPTBN2 272689.3 2 2 79.1 32.31 HUMAN 1 11.758 -18.3088 QAQYLGMSCDGPFKP-p P23526;S420-p QAQYLGMSCDGPFKP 0.694929373039766 0.204279871594527 0.0543333333333333 -0.130333333333333 2.96581201816664 9.07348746242277 0.0543333333333333 -0.130333333333333 0.505148186486005 0.123780221000304 0.713459739587991 -1.82042410429389 P23526 AHCY P23526.S420.p_AHCY P23526_S420s _1_1_420_420 P23526 P23526|P23526-2 Adenosylhomocysteinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18713.18713.4 17.51 17.51 3.823 4 1 1 0 743.5983 2891.4009 S420s TMT10 413 (K) QAQYLGMsCDGPFKPDHYRY (-) QAQY(0.0)LGMS(0.99)CDGPFKPDHY(0.0)RY(0.0) C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AHCY 48285.8 2 4 3386.1 52.27 HUMAN 1 2.9658 -9.0735 QARAAKLSEGSQPAE-p Q9UKV3;S240-p QARAAKLSEGSQPAE 0.053781436249315 0.00759424447007243 -1.23633333333333 -1.31766666666667 27.5862006164554 30.2714088880154 -1.23633333333333 -1.31766666666667 0.00174333134313483 0.00093941850582138 -5.73003687737147 -6.50469386098147 Q9UKV3 ACIN1 Q9UKV3.S240.p_ACIN1 Q9UKV3_S240sS243s_2_2_240_243 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10476.10476.3 11.61 11.61 11.609 4 2 2 0 1002.7875 2846.4056 S240s S243s TMT10 236 (R) AAKLsEGsQPAEEEEDQETPSR (N) AAKLS(0.99)EGS(0.99)QPAEEEEDQET(0.0)PS(0.0)R K:TMT10,s:Phosphorylated S ACIN1 152258.2 2 43 32.2 899.18 HUMAN 1 -27.5862 -30.2714 QARAKTQTPPVSPAP-p Q14247;T401-p QARAKTQTPPVSPAP 0.803039679478447 0.172432701519876 0.0406666666666667 -0.148 1.83531025754213 10.0348233989399 0.0406666666666667 -0.148 0.655343466791416 0.0992013677560765 0.472013337805678 -1.98695447177589 Q14247 CTTN Q14247.T401.p_CTTN Q14247_T401t _1_1_401_401 Q14247 Q14247-2|Q14247-3 Src substrate cortactin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21696.21696.3 25.11 18.41 2.143 8 1 1 0 1255.6321 3684.9161 T401t TMT10 399 (K) TQtPPVSPAPQPTEERLPSSPVYEDAASFK (A) T(0.0)QT(0.99)PPVS(0.0)PAPQPT(0.0)EERLPS(0.0)S(0.0)PVY(0.0)EDAAS(0.0)FK K:TMT10,t:Phosphorylated T CTTN 61756.2 16 9 493.1 293.68 HUMAN 1 1.8353 -10.0348 QARASWESLDEEWRA-p Q00587;S353-p QARASWESLDEEWRA 0.442129180414877 0.0119359897334166 -0.198333333333333 -0.494666666666667 6.53236575345125 26.8736141385987 -0.198333333333333 -0.494666666666667 0.222209910605082 0.00205418042396052 -1.37888148910714 -5.52691849871465 Q00587 CDC42EP1 Q00587.S353.p_CDC42EP1 Q00587_S353s _1_1_353_353 Q00587 Q00587|Q00587-2 Cdc42 effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20475.20475.3 18.67 18.67 3.355 3 1 1 0 795.3663 2304.1206 S353s TMT10 349 (R) ASWEsLDEEWRAPQAGSR (T) AS(0.0)WES(0.99)LDEEWRAPQAGS(0.0)R s:Phosphorylated S CDC42EP1 40408.2 1 9 1362.1 149.93 HUMAN 1 -6.5324 -26.8736 QARQAVKTPPRRLPT-p Q9H0E9-2;T175-p QARQAVKTPPRRLPT 0.62608448498691 0.0165822238238146 0.0846666666666667 -0.562 3.77708909299985 24.5849008319951 0.0846666666666667 -0.562 0.419074360248812 0.0034794445261839 0.874272747106748 -4.93338271736634 Q9H0E9 BRD8 Q9H0E9.2.T175.p_BRD8 Q9H0E9-2_T175t _1_1_175_175 Q9H0E9-2 Q9H0E9|Q9H0E9-2|B5MCW3|Q9H0E9-4|Q9H0E9-3 Isoform 2 of Bromodomain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5754.5965.2 11.25 11.25 99 1 1 1 0 717.9153 1354.8571 T175t TMT10 171 (R) QAVKtPPR (R) QAVKT(1.0)PPR K:TMT10,t:Phosphorylated T BRD8 103294.1 7 1 654.1 253.82 HUMAN 1 3.7771 -24.5849 QARQGSRSPLTMDKF-p X6R7X0;S27-p QARQGSRSPLTMDKF 0.136285666158466 0.887544824916948 0.322666666666667 0.0153333333333334 17.7592175775784 0.728661153300944 0.322666666666667 0.0153333333333334 0.0167524465994803 0.845539468607569 3.41369850731824 0.204339463859355 X6R7X0 NotFound X6R7X0.S27.p_NotFound X6R7X0_S27s _1_1_27_27 X6R7X0 X6R7X0 Transcription elongation factor A N-terminal and central domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9117.9117.3 11.65 5.25 2.322 3 1 1 0 586.6387 1677.9358 S27s TMT10 23 (R) QGSRsPLTMDK (F) QGS(0.0)RS(0.99)PLT(0.0)MDK K:TMT10,s:Phosphorylated S TCEANC2 27426.2 1 1 4787.1 26.64 HUMAN 1 17.7592 0.7287 QASASYDSEEEEEGL-p Q15059;S563-p QASASYDSEEEEEGL 0.839442217239864 0.0629095680996146 0.0346666666666667 0.212666666666667 1.46836898644892 15.9918508382598 0.0346666666666667 0.212666666666667 0.713120795744443 0.0251660419481386 0.387561504890809 3.06446174651756 Q15059 BRD3 Q15059.S563.p_BRD3 Q15059_S563s _1_1_563_563 Q15059 Q15059 Bromodomain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19255.19255.2 23.29 23.29 3.65 6 1 1 0 1516.6556 2952.3345 S563s TMT10 556 (K) QASASYDsEEEEEGLPMSYDEK (R) QAS(0.0)AS(0.0)Y(0.0)DS(0.99)EEEEEGLPMS(0.0)Y(0.0)DEK K:TMT10,s:Phosphorylated S BRD3 79825.3 9 3 1315.1 154.93 HUMAN 1 1.4684 15.9919 QASMVINSDTDDEEE-p Q14676;S402-p QASMVINSDTDDEEE 0.470414939058913 0.138284732890357 0.100333333333333 0.156 6.04505089106519 11.3197010935413 0.100333333333333 0.156 0.248596443327572 0.0737955018693062 1.29258506815694 2.21118544243232 Q14676 MDC1 Q14676.S402.p_MDC1 Q14676_S402sT404t_2_2_402_404 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32755.33406.4 29.72 29.72 7.048 6 2 2 0 873.9113 3332.6932 S402s T404t TMT10 394 (K) SQASMVINsDtDDEEEVSAALTLAHLK (E) S(0.0)QAS(0.0)MVINS(0.99)DT(0.99)DDEEEVS(0.0)AALT(0.0)LAHLK K:TMT10,s:Phosphorylated S,t:Phosphorylated T MDC1 227803.2 86 61 6.1 1662.62 HUMAN 1 6.0451 11.3197 QASRPTRSPSGSGSR-p Q96T58;S268-p QASRPTRSPSGSGSR 0.511696284595283 0.264534255948735 -0.137 -0.139666666666667 5.3801526694672 7.60642455129198 -0.137 -0.139666666666667 0.289724173788616 0.173523198729201 -1.17328934179244 -1.56633047670044 Q96T58 SPEN Q96T58.S268.p_SPEN Q96T58_S268s _1_1_268_268 Q96T58 Q96T58 Msx2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.3575.3575.4 11.64 3.88 1.871 7 1 1 0 528.5202 2031.0893 S268s TMT10 258 (R) LASQASRPTRsPSGSGSR (S) LAS(0.0)QAS(0.0)RPT(0.0)RS(0.99)PS(0.0)GS(0.0)GS(0.0)R s:Phosphorylated S SPEN 403267.9 2 3 2199.1 93.72 HUMAN 1 -5.3802 -7.6064 QASRSTAYEDYYYHP-p O43390-2;Y434-p QASRSTAYEDYYYHP 0.319991630816832 0.101540977942331 0.167666666666667 -0.318333333333333 9.26279723340836 13.1262386014253 0.167666666666667 -0.318333333333333 0.118500525607879 0.0486828662552111 1.85386433740462 -2.53243391060624 O43390 HNRNPR O43390.2.Y434.p_HNRNPR O43390-2_Y434y _1_1_434_434 O43390-2 O43390-2|O43390-3|O43390-4|B4DT28 Isoform 2 of Heterogeneous nuclear ribonucleoprotein R GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12839.12839.3 17.66 17.66 3.146 6 1 1 0 689.9713 1987.9388 Y434y TMT10 431 (R) STAyEDYYYHPPPR (M) S(0.0)T(0.0)AY(0.99)EDY(0.0)Y(0.0)Y(0.0)HPPPR y:Phosphorylated Y HNRNPR 71498.4 1 1 202.1 17.66 HUMAN 1 9.2628 -13.1262 QASSTPLSPTRITRL-p P02545;S22-p QASSTPLSPTRITRL 0.563810063757983 0.0121513566667617 -0.135 -0.442 4.58510285382828 26.7493464717165 -0.135 -0.442 0.347928267577084 0.00211380710254542 -1.0274458651755 -5.49342818789436 P02545 LMNA P02545.S22.p_LMNA P02545_S22s _1_1_22_22 P02545 P02545|P02545-3|P02545-6|P02545-2|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7333.7333.2 14.06 14.06 1.796 6 1 1 0 834.9116 1588.8492 S22s TMT10 12 (R) SGAQASSTPLsPTR (I) S(0.0)GAQAS(0.0)S(0.0)T(0.0)PLS(0.99)PT(0.0)R s:Phosphorylated S LMNA 74423.5 8 5 60.1 706.83 HUMAN 1 -4.5851 -26.7493 QASVGSRSEGEGEAA-p Q9NWV8;S49-p QASVGSRSEGEGEAA 0.528234856593507 0.0880026741199583 0.093 0.195666666666667 5.12953019608356 13.9718281021053 0.093 0.195666666666667 0.306935400194396 0.0400698013877591 1.12774306692536 2.68614010722934 Q9NWV8 BABAM1 Q9NWV8.S49.p_BABAM1 Q9NWV8_S49s _1_1_49_49 Q9NWV8 Q9NWV8|J3KQS6|Q9NWV8-3|M0QXG9 BRISC and BRCA1-A complex member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11788.11788.3 22.88 22.88 1.205 7 1 1 0 1210.2417 3548.7465 S49s TMT10 38 (R) AVGAQASVGSRsEGEGEAASADDGSLNTSGAGPK (S) AVGAQAS(0.0)VGS(0.0)RS(0.99)EGEGEAAS(0.0)ADDGS(0.0)LNT(0.0)S(0.0)GAGPK K:TMT10,s:Phosphorylated S BABAM1 37072.9 8 3 1373.1 148.88 HUMAN 1 5.1295 13.9718 QATGSPHTSPTHGGG-p E7EVB6;T527-p QATGSPHTSPTHGGG 0.706047474454179 0.0253384995720489 -0.0683333333333333 -0.368333333333333 2.84400064510837 21.7247461389773 -0.0683333333333333 -0.368333333333333 0.519517205841097 0.00672241602945656 -0.688544963052792 -4.25484105861277 E7EVB6 DTNB E7EVB6.T527.p_DTNB E7EVB6_S524sT527t_2_2_524_527 E7EVB6 E7EVB6|E9PEY4|O60941-5|O60941-6 Dystrobrevin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7545.7545.4 10.99 10.99 1.122 5 2 2 0 704.8231 2656.3398 S524s T527t TMT10 519 (K) AQATGsPHtSPTHGGGRPMPMPVR (S) AQAT(0.0)GS(0.99)PHT(0.99)S(0.0)PT(0.0)HGGGRPMPMPVR s:Phosphorylated S,t:Phosphorylated T DTNB 71367.3 4 7 792.3 224.62 HUMAN 1 -2.844 -21.7247 QATHREASPSTLNDK-p P54253;S406-p QATHREASPSTLNDK 0.488268698802863 0.0369051177989853 0.175 0.648 5.73436523348777 19.2682009683058 0.175 0.648 0.267032103377415 0.011835317231636 1.23709481144375 3.72030888224771 P54253 ATXN1 P54253.S406.p_ATXN1 P54253_S406s _1_1_406_406 P54253 P54253 Ataxin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7500.7500.2 7.42 7.42 3.417 3 1 1 0 685.8247 1290.6739 S406s Hydrogen 404 (R) EAsPSTLNDK (S) EAS(0.99)PS(0.0)T(0.0)LNDK K:TMT10-Lys-Only,s:Phosphorylated S ATXN1 87263.4 3 4 1702.1 120.26 HUMAN 1 5.7344 19.2682 QATLPVGSPSRPLSR-p O14523;S374-p QATLPVGSPSRPLSR 0.911440343553457 0.679078585656714 -0.0186666666666667 -0.0436666666666667 0.789646481980082 2.29709602643967 -0.0186666666666667 -0.0436666666666667 0.833749049473892 0.58923752594542 -0.220247944193828 -0.573564838815415 O14523 C2CD2L O14523.S374.p_C2CD2L O14523_S374s _1_1_374_374 O14523 O14523-2|E9PK05 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20453.20453.5 15.93 13.01 1.164 8 1 1 0 597.0997 2901.4938 S374s TMT10 356 (R) SSSCGDTELLGQATLPVGsPSRPLSR (R) S(0.0)S(0.0)S(0.0)CGDT(0.0)ELLGQAT(0.0)LPVGS(0.99)PS(0.0)RPLS(0.0)R C:Carbamidomethylation,s:Phosphorylated S C2CD2L 76636.4 3 5 411.1 322.51 HUMAN 1 -0.7896 -2.2971 QATRFFPSPAQEGAW-p Q6NUN9-2;S323-p QATRFFPSPAQEGAW 0.172398238493754 0.125809478342576 0.228333333333333 0.229666666666667 15.2007816553719 11.8722452301644 0.228333333333333 0.229666666666667 0.0301940822994428 0.0649793670983091 2.91619345719394 2.30855730156487 Q6NUN9 ZNF746 Q6NUN9.2.S323.p_ZNF746 Q6NUN9-2_S323s _1_1_323_323 Q6NUN9-2 Q6NUN9|Q6NUN9-3|Q6NUN9-2 Isoform 2 of Zinc finger protein 746 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.33616.33645.3 16.67 16.67 1.118 5 1 1 0 1110.8643 3250.6007 S323s TMT10 320 (R) FFPsPAQEGAWESQGSSFPSQDPVLGLR (E) FFPS(0.99)PAQEGAWES(0.0)QGS(0.0)S(0.0)FPS(0.0)QDPVLGLR s:Phosphorylated S ZNF746 70118.4 3 3 3117.1 60.3 HUMAN 1 15.2008 11.8722 QATSSRRSYPGHVQP-p Q86VS8;S707-p QATSSRRSYPGHVQP 0.473939665716417 0.0668058772415733 0.206 -0.382666666666667 5.97246158884281 15.631025061713 0.206 -0.382666666666667 0.252786479205582 0.0273462319925138 1.27965627350964 -2.99560309766505 Q86VS8 HOOK3 Q86VS8.S707.p_HOOK3 Q86VS8_S707s _1_1_707_707 Q86VS8 Q86VS8 Protein Hook homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6261.6261.3 16.42 16.42 2.973 3 1 1 0 531.5981 1512.812 S707s TMT10 707 (R) sYPGHVQPATAR (-) S(0.99)Y(0.0)PGHVQPAT(0.0)AR s:Phosphorylated S HOOK3 83523.8 1 2 4272.1 34.42 HUMAN 1 5.9725 -15.631 QATVSWDSGGSDEAP-p E7ESA6;S749-p QATVSWDSGGSDEAP 0.82493130180591 0.329123711836124 0.049 -0.096 1.6121929032607 6.38972967327258 0.049 -0.096 0.689891365832856 0.229629157640044 0.421097255527907 -1.3533643780968 E7ESA6 NotFound E7ESA6.S749.p_NotFound E7ESA6_S749sS752s_2_2_749_752 E7ESA6 E7ESA6|Q05397-5|Q05397-7|Q05397-2|E9PEI4|B4DWJ1|Q05397-6 Focal adhesion kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14723.14723.4 15.18 10.45 1.418 7 2 2 0 861.908 3284.67 S749s S752s TMT10 742 (R) QATVSWDsGGsDEAPPKPSRPGYPSPR (S) QAT(0.0)VS(0.0)WDS(0.99)GGS(0.99)DEAPPKPS(0.0)RPGY(0.0)PS(0.0)PR K:TMT10,s:Phosphorylated S PTK2 124992.4 6 10 979.1 192.68 HUMAN 1 1.6122 -6.3897 QAVDQIKSQEQLAAE-p P15311;S413-p QAVDQIKSQEQLAAE 0.990610515401728 0.988131242504968 0.00233333333333333 -0.00199999999999998 0.0841952433647511 0.079049309411355 0.00233333333333334 -0.00199999999999999 0.980800041755523 0.981962875682555 0.0251981874012477 -0.0236695658664061 P15311 EZR P15311.S413.p_EZR P15311_S413s _1_1_413_413 P15311 P15311|E7EQR4 Ezrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27188.27188.3 14.92 11.7 14.916 3 1 1 0 730.7089 2110.1432 S413s TMT10 413 (K) sQEQLAAELAEYTAK (I) S(0.99)QEQLAAELAEY(0.0)T(0.0)AK K:TMT10,s:Phosphorylated S EZR 69525.7 1 4 2031.1 101.61 HUMAN 1 0.0842 -0.079 QAWPPPDSPVRVDTV-p Q63ZY3-2;S323-p QAWPPPDSPVRVDTV 0.351928236415973 0.0186587735233726 -0.127 -0.353333333333333 8.42527552195704 23.7947413548065 -0.127 -0.353333333333333 0.143705188206061 0.00417374454567929 -1.70886645646797 -4.73930983076531 Q63ZY3 KANK2 Q63ZY3.2.S323.p_KANK2 Q63ZY3-2_S323s _1_1_323_323 Q63ZY3-2 Q63ZY3-2|Q63ZY3-3 Isoform 2 of KN motif and ankyrin repeat domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16510.16510.3 22.41 22.41 2.527 2 1 1 0 922.4593 2685.3946 S323s TMT10 310 (R) QADPQPQAWPPPDsPVRVDTVR (V) QADPQPQAWPPPDS(0.99)PVRVDT(0.0)VR s:Phosphorylated S KANK2 92718.4 4 4 1442.1 141.99 HUMAN 1 -8.4253 -23.7947 QCHTFDSSNVE____-p P24593;S269-p QCHTFDSSNVE____ 0.330325771589878 0.103267630455874 0.159666666666667 0.315666666666667 8.98957469824726 13.024632787718 0.159666666666667 0.315666666666667 0.126195111058866 0.0498352591770908 1.80655812208658 2.51412403919801 P24593 IGFBP5 P24593.S269.p_IGFBP5 P24593_S268sS269s_2_2_268_269 P24593 P24593 Insulin-like growth factor-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31104.31104.3 16.13 16.13 2.312 5 2 2 0 1215.8419 3484.59 S268s S269s N270n TMT10 247 (K) YGMKLPGMEYVDGDFQCHTFDssnVE (-) Y(0.0)GMKLPGMEY(0.0)VDGDFQCHT(0.0)FDS(0.99)S(0.99)N(1.0)VE K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated IGFBP5 31596.7 1 5 2059.1 100.08 HUMAN 1 8.9896 13.0246 QCILGRLSEKSSGQM-p Q96Q89-2;S102-p QCILGRLSEKSSGQM 0.187863102695022 0.00408004700175895 -0.464666666666667 -0.578333333333333 14.248071615028 35.1867568122517 -0.464666666666667 -0.578333333333333 0.0376004323317516 0.00030291746852295 -2.73857964033627 -8.16322006306563 Q96Q89 KIF20B Q96Q89.2.S102.p_KIF20B Q96Q89-2_S102s _1_1_102_102 Q96Q89-2 Q96Q89-2|Q96Q89-3|Q96Q89-4 Isoform 2 of Kinesin-like protein KIF20B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18221.18221.3 11.53 6.02 99 1 1 1 0 656.6855 1888.0726 S102s TMT10 93 (K) EPQCILGRLsEK (S) EPQCILGRLS(1.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIF20B 215641.1 1 3 486.1 295.59 HUMAN 1 -14.2481 -35.1868 QCMKSLGSADELFKH-p Q15075;S52-p QCMKSLGSADELFKH 0.902109939753457 0.0914707137376667 0.0203333333333333 0.182333333333333 0.87911474854162 13.7366139682749 0.0203333333333333 0.182333333333333 0.816748837764469 0.0422998281681698 0.243274566992585 2.64313691630102 Q15075 EEA1 Q15075.S52.p_EEA1 Q15075_S52s _1_1_52_52 Q15075 Q15075 Early endosome antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24145.24540.2 14.42 14.42 4.115 2 1 1 0 802.9214 1524.8674 S52s TMT10 49 (K) SLGsADELFK (H) S(0.0)LGS(0.99)ADELFK K:TMT10,s:Phosphorylated S EEA1 163432.8 2 4 1129.1 174.59 HUMAN 1 0.8791 13.7366 QCPPRAKTPEPGAQQ-p Q9H9D4;T322-p QCPPRAKTPEPGAQQ 0.476079193431219 0.0937899460242387 0.107333333333333 0.221666666666667 5.9340127713892 13.5936138882079 0.107333333333333 0.221666666666667 0.255034376041476 0.0437158181976559 1.27279957866534 2.61708835057235 Q9H9D4 ZNF408 Q9H9D4.T322.p_ZNF408 Q9H9D4_T322t _1_1_322_322 Q9H9D4 Q9H9D4 Zinc finger protein 408 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14331.14331.4 18.22 18.22 8.272 4 1 1 0 603.3189 2330.2869 T322t TMT10 320 (R) AKtPEPGAQQSGFPTLSR (S) AKT(0.99)PEPGAQQS(0.0)GFPT(0.0)LS(0.0)R K:TMT10,t:Phosphorylated T ZNF408 80206.2 4 2 2225.1 92.82 HUMAN 1 5.934 13.5936 QCVQELASPSLLFIF-p Q04637-9;S1278-p QCVQELASPSLLFIF 0.975059407652305 0.345789626717724 -0.00500000000000002 0.147666666666667 0.212139274048964 6.11193892028575 -0.00500000000000002 0.147666666666667 0.952326945496167 0.24479700945088 -0.0626070896467286 1.30416443119341 Q04637 EIF4G1 Q04637.9.S1278.p_EIF4G1 Q04637-9_S1278s _1_1_1278_1278 Q04637-9 Q04637-9 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37209.37209.3 15.36 15.36 1.826 2 1 1 0 872.4543 2535.3842 S1278s TMT10 1268 (K) EAVQCVQELAsPSLLFIFVR (H) EAVQCVQELAS(0.99)PS(0.0)LLFIFVR C:Carbamidomethylation,s:Phosphorylated S EIF4G1 176975.4 1 31 107.1 585.61 HUMAN 1 -0.2121 6.1119 QDAAGKDSPNRHSKG-p O60292;S1254-p QDAAGKDSPNRHSKG 0.355124350533041 0.605866104518387 0.314333333333333 0.238333333333333 8.35344928692975 2.95335871573578 0.314333333333333 0.238333333333333 0.146101633393816 0.506598766989198 1.69642591642353 0.71082402312344 O60292 SIPA1L3 O60292.S1254.p_SIPA1L3 O60292_S1254s _1_1_1254_1254 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3398.3398.4 13.09 11.03 3.17 2 1 1 0 570.3031 2198.2245 S1254s TMT10 1247 (R) QDAAGKDsPNRHSK (G) QDAAGKDS(0.99)PNRHS(0.0)K K:TMT10,s:Phosphorylated S SIPA1L3 195918.6 1 16 144.1 520.25 HUMAN 1 8.3534 2.9534 QDAEKDGSGPEGGIV-p Q9C0B9;S236-p QDAEKDGSGPEGGIV 0.564703045643943 0.0257366445507924 -0.0853333333333333 -0.612 4.57162429679141 21.6190526329357 -0.0853333333333333 -0.612 0.34900975856856 0.00688802534879295 -1.02493633539078 -4.23098120289893 Q9C0B9 ZCCHC2 Q9C0B9.S236.p_ZCCHC2 Q9C0B9_S236s _1_1_236_236 Q9C0B9 Q9C0B9 Zinc finger CCHC domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9394.9394.4 18.13 16.29 99 1 1 1 0 938.9196 3672.6898 S236s TMT10 215 (R) GGAEDERGEDGDGEQDAEKDGsGPEGGIVEPR (V) GGAEDERGEDGDGEQDAEKDGS(1.0)GPEGGIVEPR K:TMT10,s:Phosphorylated S ZCCHC2 127074.8 2 1 4050.1 38.56 HUMAN 1 -4.5716 -21.6191 QDAEPAGSQETKDSG-p Q9BVJ6;S445-p QDAEPAGSQETKDSG 0.540948825382371 0.765573896197239 0.137333333333333 -0.0336666666666667 4.92348043911932 1.60288846701677 0.137333333333333 -0.0336666666666667 0.321848845850261 0.691370991197307 1.09001665353162 -0.418900002083463 Q9BVJ6 UTP14A Q9BVJ6.S445.p_UTP14A Q9BVJ6_S445s _1_1_445_445 Q9BVJ6 Q9BVJ6 U3 small nucleolar RNA-associated protein 14 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7509.7509.4 13.56 10.77 2.84 4 1 1 0 593.5439 2291.1879 S445s TMT10 433 (K) RSELSQDAEPAGsQETK (D) RS(0.0)ELS(0.0)QDAEPAGS(0.99)QET(0.0)K K:TMT10,s:Phosphorylated S UTP14A 88147.4 5 9 550.1 274.41 HUMAN 1 4.9235 -1.6029 QDAEVSKSDIGEVIL-p P38646;S378-p QDAEVSKSDIGEVIL 0.377838045905345 0.0530716248089512 0.171666666666667 0.256666666666667 7.81229595210965 17.0057049072238 0.171666666666667 0.256666666666667 0.165489485130422 0.0199264305225502 1.60258119878184 3.26127242041759 P38646 HSPA9 P38646.S378.p_HSPA9 P38646_S378s _1_1_378_378 P38646 P38646 Stress-70 protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28867.28867.4 27 27 1.195 3 1 1 0 736.8799 2864.5262 S378s TMT10 369 (K) AMQDAEVSKsDIGEVILVGGMTR (M) AMQDAEVS(0.0)KS(0.99)DIGEVILVGGMT(0.0)R K:TMT10,s:Phosphorylated S HSPA9 73964.5 2 32 367.2 341.38 HUMAN 1 7.8123 17.0057 QDAMEYSSEEEEVDL-p A0A0C4DG89;S296-p QDAMEYSSEEEEVDL 0.657302725891418 0.0277238968700976 -0.0883333333333333 0.292333333333333 3.4203255910448 21.1045179112472 -0.0883333333333334 0.292333333333333 0.454953950924362 0.00775440016330397 -0.80456531013709 4.11597825908551 A0A0C4DG89 DDX46 A0A0C4DG89.S296.p_DDX46 A0A0C4DG89_S295sS296s_2_2_295_296 A0A0C4DG89 A0A0C4DG89|Q7L014|D6RJA6 Probable ATP-dependent RNA helicase DDX46 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23888.24089.5 25.25 25.25 2.315 7 2 2 0 1001.2724 4826.4046 M292m S295s S296s TMT10 280 (K) KKGELMENDQDAmEYssEEEEVDLQTALTGYQTK (Q) KKGELM(0.0)ENDQDAM(0.99)EY(0.0)S(0.99)S(0.99)EEEEVDLQT(0.0)ALT(0.0)GY(0.0)QT(0.0)K K:TMT10,m:Oxidized methionine,s:Phosphorylated S DDX46 117972.6 66 8 985.1 191.96 HUMAN 1 -3.4203 21.1045 QDAPIILSDSEEEEM-p Q06265;S392-p QDAPIILSDSEEEEM 0.949355669265611 0.210504808646645 -0.012 0.129333333333333 0.446268399124842 8.90215433322227 -0.012 0.129333333333333 0.902346130050145 0.128761066939464 -0.128563699648606 1.79078878931551 Q06265 EXOSC9 Q06265.S392.p_EXOSC9 Q06265_S392sS394s_2_2_392_394 Q06265 Q06265|D6RIY6|Q06265-3 Exosome complex component RRP45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30949.31350.5 25.88 25.88 1.718 5 2 2 0 1050.5278 5088.6666 S392s S394s TMT10 373 (K) MDTGVEVSDIGSQDAPIILsDsEEEEMIILEPDKNPKK (I) MDT(0.0)GVEVS(0.0)DIGS(0.0)QDAPIILS(0.99)DS(0.99)EEEEMIILEPDKNPKK K:TMT10,s:Phosphorylated S EXOSC9 49575.8 13 3 2666.1 74.5 HUMAN 1 -0.4463 8.9022 QDAQNPLSAGLQGAC-p Q13561;S249-p QDAQNPLSAGLQGAC 0.73299152608228 0.401370561163539 -0.0763333333333334 0.0793333333333334 2.55309473822912 5.27282851827272 -0.0763333333333334 0.0793333333333334 0.555508266666801 0.29697312442992 -0.628081351333951 1.15358447834099 Q13561 DCTN2 Q13561.S249.p_DCTN2 Q13561_S249s _1_1_249_249 Q13561 Q13561-2|Q13561-3|F8W1I6 Dynactin subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36758.36758.4 16.11 12.92 2.295 2 1 1 0 900.4382 3518.7693 S249s TMT10 240 (R) CDQDAQNPLsAGLQGACLMETVELLQAK (V) CDQDAQNPLS(0.99)AGLQGACLMET(0.0)VELLQAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DCTN2 44344.3 1 5 1016.1 188.09 HUMAN 1 -2.5531 5.2728 QDASAEQSDHDDEVA-p Q6P2E9;S879-p QDASAEQSDHDDEVA 0.637809072021475 0.548865706488096 0.0653333333333333 0.0596666666666667 3.64444822534309 3.5047841742558 0.0653333333333333 0.0596666666666667 0.432071059109088 0.446191797850034 0.848524628477293 0.821073482291466 Q6P2E9 EDC4 Q6P2E9.S879.p_EDC4 Q6P2E9_S879s _1_1_879_879 Q6P2E9 Q6P2E9|Q6P2E9-2 Enhancer of mRNA-decapping protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19062.19062.5 23.63 23.63 2.389 7 1 1 0 788.9706 3860.8575 S879s TMT10 870 (R) DSQDASAEQsDHDDEVASLASASGGFGTKVPAPR (L) DS(0.0)QDAS(0.0)AEQS(0.99)DHDDEVAS(0.0)LAS(0.0)AS(0.0)GGFGT(0.0)KVPAPR K:TMT10,s:Phosphorylated S EDC4 153084.9 12 16 177.1 481.34 HUMAN 1 3.6444 3.5048 QDCCGNCSDSEEELP-p P43250;S566-p QDCCGNCSDSEEELP 0.572719143373661 0.483518005635795 0.0903333333333333 0.234666666666667 4.45540681181092 4.2126519996429 0.0903333333333333 0.234666666666667 0.358475367641767 0.379083428697521 1.00323997534064 0.957397615226679 P43250 GRK6 P43250.S566.p_GRK6 P43250_S566s _1_1_566_566 P43250 P43250|F8W9W2 G protein-coupled receptor kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16905.16905.3 16.9 16.9 1.638 3 1 1 0 826.9974 2399.0111 S566s TMT10 559 (R) QDCCGNCsDSEEELPTRL (-) QDCCGNCS(0.99)DS(0.0)EEELPT(0.0)RL C:Carbamidomethylation,s:Phosphorylated S GRK6 67245 1 3 3249.1 55.9 HUMAN 1 4.4554 4.2127 QDCFEEKSLANDFST-p Q03188;S46-p QDCFEEKSLANDFST 0.390105099545893 0.392507063612001 -0.115666666666667 -0.115 7.55903403885196 5.39971303624944 -0.115666666666667 -0.115 0.175427064468679 0.288422207424242 -1.5585570573926 -1.17657518820261 Q03188 CENPC Q03188.S46.p_CENPC Q03188_S46s _1_1_46_46 Q03188 Q03188|Q03188-2 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15567.15567.3 15.81 15.81 6.613 5 1 1 0 608.3021 1742.9325 S46s TMT10 46 (K) sLANDFSTNSTK (S) S(0.99)LANDFS(0.0)T(0.0)NS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S CENPC 107459.5 1 1 209.1 442.77 HUMAN 1 -7.559 -5.3997 QDCVLLASEGTQVMR-p Q8IY42;S152-p QDCVLLASEGTQVMR 0.796711690958969 0.125548379068969 0.0443333333333333 -0.177333333333333 1.9041284636997 11.8842796310277 0.0443333333333333 -0.177333333333333 0.645040752787477 0.06479955700838 0.487464346381198 -2.31068583675885 Q8IY42 C4orf19 Q8IY42.S152.p_C4orf19 Q8IY42_S152s _1_1_152_152 Q8IY42 Q8IY42 Uncharacterized protein C4orf19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16998.16998.3 11.12 11.12 1.167 2 1 1 0 791.7385 2293.2408 S152s TMT10 144 (R) KQDCVLLAsEGTQVMR (N) KQDCVLLAS(0.99)EGT(0.0)QVMR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S C4orf19 34254.4 1 3 703.1 239.48 HUMAN 1 1.9041 -11.8843 QDDEKAISPTSATSS-p Q9Y4I1-3;S600-p QDDEKAISPTSATSS 0.740865030275971 0.416673023027364 0.067 -0.111 2.47201797444373 5.05740197243012 0.067 -0.111 0.565976243793132 0.31207559180255 0.610970129845752 -1.11433957554367 Q9Y4I1 MYO5A Q9Y4I1.3.S600.p_MYO5A Q9Y4I1-3_S600s _1_1_600_600 Q9Y4I1-3 Q9Y4I1-3 Isoform 3 of Unconventional myosin-Va HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26524.26524.4 10.29 10.29 2.499 6 1 1 0 755.3719 2938.5232 S600s TMT10 587 (K) MLPELFQDDEKAIsPTSATSSGR (T) MLPELFQDDEKAIS(0.99)PT(0.0)S(0.0)AT(0.0)S(0.0)S(0.0)GR K:TMT10,s:Phosphorylated S MYO5A 220315.4 2 66 296.5 379.15 HUMAN 1 2.472 -5.0574 QDDLKRRSMSIDDTP-p Q96N67-6;S180-p QDDLKRRSMSIDDTP 0.413519054255843 0.0335609787610036 0.286 -0.358 7.07199099809507 19.8702129599896 0.286 -0.358 0.19624603918891 0.010303355958214 1.47360906605206 -3.84758132026486 Q96N67 DOCK7 Q96N67.6.S180.p_DOCK7 Q96N67-6_S180s _1_1_180_180 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11425.11425.2 11.69 11.69 3.222 3 1 1 0 665.7994 1250.6248 S180s TMT10 180 (R) sMSIDDTPR (G) S(0.99)MS(0.0)IDDT(0.0)PR s:Phosphorylated S DOCK7 243551.1 2 3 345.1 352.4 HUMAN 1 7.072 -19.8702 QDDSQRRSLPAEEGS-p Q9UKJ3;S758-p QDDSQRRSLPAEEGS 0.328677632727316 0.00840448513471 -0.156666666666667 0.433666666666667 9.03614734559898 29.477536896581 -0.156666666666667 0.433666666666667 0.124849056717986 0.00112783692812191 -1.81462045021378 6.26502113991257 Q9UKJ3 GPATCH8 Q9UKJ3.S758.p_GPATCH8 Q9UKJ3_S758s _1_1_758_758 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6426.6426.2 20.31 15 18.841 3 1 1 0 864.4514 1647.9318 S758s Hydrogen 758 (R) sLPAEEGSSGKK (D) S(0.99)LPAEEGS(0.0)S(0.0)GKK K:TMT10-Lys-Only,s:Phosphorylated S GPATCH8 165107.3 4 7 231.1 422.52 HUMAN 1 -9.0361 29.4775 QDEFRNFSYVSPELQ-p P24723;S675-p QDEFRNFSYVSPELQ 0.693068595039592 0.030099587285394 -0.0743333333333333 -0.335333333333333 2.9881598548332 20.5856868474467 -0.0743333333333333 -0.335333333333333 0.502555481739344 0.00873838781900656 -0.718006404412223 -4.00190227229764 P24723 PRKCH P24723.S675.p_PRKCH P24723_S675s _1_1_675_675 P24723 P24723|P24723-2 Protein kinase C eta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25511.25511.2 11.34 11.34 2.044 3 1 1 0 795.3759 1509.7787 S675s TMT10 673 (R) NFsYVSPELQP (-) NFS(0.99)Y(0.0)VS(0.0)PELQP s:Phosphorylated S PRKCH 79196.4 4 6 1569.1 130.79 HUMAN 1 -2.9882 -20.5857 QDFGNLFSFPSYSQK-p Q02880;S1449-p QDFGNLFSFPSYSQK 0.37739522151419 0.0371290854143326 0.128666666666667 0.296333333333333 7.82225545708244 19.2284195193888 0.128666666666667 0.296333333333333 0.165110409412458 0.0119442269862579 1.60431079846547 3.71197890274744 Q02880 TOP2B Q02880.S1449.p_TOP2B Q02880_S1449s _1_1_1449_1449 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30428.30428.3 16.81 16.81 5.278 5 1 1 0 797.3884 2310.1807 S1449s TMT10 1441 (K) SQDFGNLFsFPSYSQK (S) S(0.0)QDFGNLFS(0.99)FPS(0.0)Y(0.0)S(0.0)QK K:TMT10,s:Phosphorylated S TOP2B 184233.7 4 37 71.1 658.36 HUMAN 1 7.8223 19.2284 QDFPGDESPRPDAQP-p Q9H7N4;S319-p QDFPGDESPRPDAQP 0.768285600986078 0.739888155609767 -0.052 0.034 2.19426281592098 1.80385355791331 -0.052 0.034 0.603356114655886 0.660107465144708 -0.551405731383406 0.464860028235534 Q9H7N4 SCAF1 Q9H7N4.S319.p_SCAF1 Q9H7N4_S319s_1_1_319_319 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25532.25532.5 26.53 26.53 1.956 11 1 1 0 1176.1512 5795.7569 N308n S319s TMT10 297 (R) ISETLAGIYDDnSLSQDFPGDEsPRPDAQPTQPTPAPGTPPQVDSTRADGAMR (R) IS(0.0)ET(0.0)LAGIY(0.0)DDN(1.0)S(0.0)LS(0.0)QDFPGDES(0.99)PRPDAQPT(0.0)QPT(0.0)PAPGT(0.0)PPQVDS(0.0)T(0.0)RADGAMR n:Deamidated,s:Phosphorylated S SCAF1 139895 5 2 76.1 647.25 HUMAN 1 -2.1943 1.8039 QDFPVVDSEEEAEEE-p Q9UBB9;S210-p QDFPVVDSEEEAEEE 0.555882142917004 0.216370899350747 0.0786666666666667 0.127666666666667 4.70850889826052 8.7454214514282 0.0786666666666667 0.127666666666667 0.338180926930806 0.133492803815174 1.05035949512475 1.76368013458137 Q9UBB9 TFIP11 Q9UBB9.S210.p_TFIP11 Q9UBB9_S210s _1_1_210_210 Q9UBB9 Q9UBB9 Tuftelin-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24393.24393.2 25.08 22.57 11.621 4 1 1 0 1621.2318 3161.4873 S210s TMT10 198 (R) TTQSMQDFPVVDsEEEAEEEFQK (E) T(0.0)T(0.0)QS(0.0)MQDFPVVDS(0.99)EEEAEEEFQK K:TMT10,s:Phosphorylated S TFIP11 97217.4 9 4 1343.1 151.47 HUMAN 1 4.7085 8.7454 QDFSSGKSEDLGTVQ-p Q7Z7G8;S563-p QDFSSGKSEDLGTVQ 0.98710196746719 0.0329213551162314 0.00299999999999998 0.294666666666667 0.114413964890979 19.9951888663507 0.00299999999999997 0.294666666666667 0.973999207496233 0.0100110841830414 0.0341272284626645 3.87429370072644 Q7Z7G8 VPS13B Q7Z7G8.S563.p_VPS13B Q7Z7G8_S563s _1_1_563_563 Q7Z7G8 Q7Z7G8|Q7Z7G8-6|Q7Z7G8-2|Q7Z7G8-3|Q7Z7G8-4 Vacuolar protein sorting-associated protein 13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14002.14002.4 18.71 18.56 1.114 6 1 1 0 778.1385 3029.5631 S563s TMT10 551 (K) GSTNQQDFSSGKsEDLGTVQEK (S) GS(0.0)T(0.0)NQQDFS(0.0)S(0.0)GKS(0.99)EDLGT(0.0)VQEK K:TMT10,s:Phosphorylated S VPS13B 454589.9 2 3 766.1 229.13 HUMAN 1 0.1144 19.9952 QDGEVQLSQNDDKTK-p Q12888-2;S585-p QDGEVQLSQNDDKTK 0.53873022349793 0.013271733212951 -0.0863333333333333 0.375 4.96489254922996 26.113747839856 -0.0863333333333333 0.375 0.318794444910154 0.00244695068046769 -1.09762052197089 5.32446422494365 Q12888 TP53BP1 Q12888.2.S585.p_TP53BP1 Q12888-2_S585s_1_1_585_585 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25340.25340.4 22.55 22.55 5.126 2 1 1 0 882.9223 3432.6993 M574m S585s TMT10 564 (K) FVPAENDSILmNPAQDGEVQLsQNDDK (T) FVPAENDS(0.0)ILM(1.0)NPAQDGEVQLS(0.99)QNDDK K:TMT10,m:Oxidized methionine,s:Phosphorylated S TP53BP1 216167.2 26 27 3.1 2297.07 HUMAN 1 -4.9649 26.1137 QDGGQNESFKRYEEE-p A0A0C4DG89;S929-p QDGGQNESFKRYEEE 0.560179727665452 0.00181314757082637 -0.0766666666666667 -0.867666666666667 4.63994508373213 43.181631126189 -0.0766666666666667 -0.867666666666667 0.343562292196284 4.80658788387532e-05 -1.0376426691284 -11.6593191720995 A0A0C4DG89 DDX46 A0A0C4DG89.S929.p_DDX46 A0A0C4DG89_S929s _1_1_929_929 A0A0C4DG89 A0A0C4DG89|Q7L014 Probable ATP-dependent RNA helicase DDX46 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19795.19795.5 18.75 13.14 10.302 3 1 1 0 862.8073 4230.0376 S929s TMT10 917 (K) QEEERQDGGQNEsFKRYEEELEINDFPQTAR (W) QEEERQDGGQNES(0.99)FKRY(0.0)EEELEINDFPQT(0.0)AR K:TMT10,s:Phosphorylated S DDX46 117972.6 2 7 985.1 191.96 HUMAN 1 -4.6399 -43.1816 QDGHEREYINCNRYF-p Q92925;Y352-p QDGHEREYINCNRYF 0.439923915975208 0.537304755207876 0.427333333333333 -0.366666666666667 6.5705273880937 3.62982002223965 0.405410432235345 -0.366666666666667 0.220265896560704 0.433528844062187 1.38560638973714 -0.845539439754384 Q92925 SMARCD2 Q92925.Y352.p_SMARCD2 Q92925_Y352y _1_1_352_352 Q92925 Q92925|Q92925-2|B9EGA3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.5188.5188.4 9.55 9.55 99 1 1 1 0 623.7829 2412.1425 Y352y TMT10 341 (K) HNQLQDGHEREyINCNR (Y) HNQLQDGHEREY(1.0)INCNR C:Carbamidomethylation,y:Phosphorylated Y SMARCD2 59148.1 1 1 355.1 9.55 HUMAN 1 6.5705 -3.6298 QDGQISDTGDLGEDI-p Q7Z4S6-5;T1627-p QDGQISDTGDLGEDI 0.665544717655066 0.0919994443327988 0.136333333333333 -0.182 3.30563854794834 13.7060546843915 0.136333333333333 -0.182 0.467128263740557 0.0425985220485738 0.781835755717561 -2.63756432198678 Q7Z4S6 KIF21A Q7Z4S6.5.T1627.p_KIF21A Q7Z4S6-5_T1627t _1_1_1627_1627 Q7Z4S6-5 Q7Z4S6-4|Q7Z4S6-2|Q7Z4S6-5|Q7Z4S6-3|Q7Z4S6-6 Isoform 5 of Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21715.21715.3 13.74 13.74 1.618 3 1 1 0 791.0234 2291.0836 T1627t TMT10 1618 (R) NLQDGQISDtGDLGEDIASN (-) NLQDGQIS(0.0)DT(0.99)GDLGEDIAS(0.0)N t:Phosphorylated T KIF21A 184163.5 4 19 390.1 332.37 HUMAN 1 3.3056 -13.7061 QDGRAYGSPWCNKQI-p A5YKK6;S1703-p QDGRAYGSPWCNKQI 0.361570339619845 0.0127663360268459 0.155666666666667 0.401 8.20993194005243 26.392862219189 0.155666666666667 0.401 0.151010381939263 0.00229463586915592 1.6715598630022 5.39818627626508 A5YKK6 CNOT1 A5YKK6.S1703.p_CNOT1 A5YKK6_S1703s _1_1_1703_1703 A5YKK6 A5YKK6|A5YKK6-2|A5YKK6-3 CCR4-NOT transcription complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15052.15052.2 8.26 8.26 8.259 2 1 1 0 810.8877 1540.7983 S1703s TMT10 1700 (R) AYGsPWCNK (Q) AY(0.0)GS(0.99)PWCNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CNOT1 269273.3 1 3 3957.1 40.28 HUMAN 1 8.2099 26.3929 QDGRRSKSIEEREEE-p B5MCU0;S283-p QDGRRSKSIEEREEE 0.952442048084725 0.544867362526116 -0.0166666666666667 0.0593333333333333 0.418750710579931 3.54678053584593 -0.0166666666666666 0.0593333333333334 0.908081710959501 0.441897908867604 -0.12096757088693 0.829311182669338 B5MCU0 NotFound B5MCU0.S283.p_NotFound B5MCU0_S283s _1_1_283_283 B5MCU0 Q15032-3|Q15032-4|B5MCU0|Q15032-2 R3H domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6679.6679.3 14.67 10.15 14.668 2 1 1 0 592.9382 1696.834 S283s TMT10 283 (K) sIEEREEEYQR (V) S(0.99)IEEREEEY(0.0)QR s:Phosphorylated S R3HDM2 109377.4 4 4 761.1 230.16 HUMAN 1 -0.4188 3.5468 QDGSGYESDGALPLP-p Q9C0H5-2;S587-p QDGSGYESDGALPLP 0.108549660249246 0.41570727607594 0.296333333333333 0.077 20.208789915368 5.07092956979973 0.295457985077336 0.0770000000000001 0.00953061680783577 0.311105037239511 3.92390289468583 1.11681213348243 Q9C0H5 ARHGAP39 Q9C0H5.2.S587.p_ARHGAP39 Q9C0H5-2_S587s _1_1_587_587 Q9C0H5-2 Q9C0H5-2 Isoform 2 of Rho GTPase-activating protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29419.29419.3 23.48 23.48 2.168 6 1 1 0 1081.1632 3161.5047 S587s TMT10 574 (R) SSWDSQQDGSGYEsDGALPLPMPGPVVR (A) S(0.0)S(0.0)WDS(0.0)QQDGS(0.0)GY(0.0)ES(0.99)DGALPLPMPGPVVR s:Phosphorylated S ARHGAP39 126053.9 2 11 910.1 201.84 HUMAN 1 20.2088 5.0709 QDHDFSESSEEEAPA-p P23497-4;S409-p QDHDFSESSEEEAPA 0.408838439850386 0.00967265628027221 0.144 0.472 7.16810645753708 28.3800595634973 0.144 0.472 0.191950547081968 0.00145209170201043 1.49040846727336 5.94523862495726 P23497 SP100 P23497.4.S409.p_SP100 P23497-4_S407sS409sS410s_3_3_407_410 P23497-4 P23497-4|P23497-3|P23497-2 Isoform Sp100-C of Nuclear autoantigen Sp-100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15601.15601.3 14.48 14.48 5.798 5 3 3 0 1115.1328 3103.4766 S407s S409s S410s TMT10 398 (K) RVIGQDHDFsEssEEEAPAEASSGALR (S) RVIGQDHDFS(0.99)ES(0.99)S(0.99)EEEAPAEAS(0.0)S(0.0)GALR s:Phosphorylated S SP100 103285 2 13 542.1 276.37 HUMAN 1 7.1681 28.3801 QDITLEPSPTARAAV-p Q96DN6;S975-p QDITLEPSPTARAAV 0.923088397579626 0.430332478656134 0.0203333333333333 0.098 0.682751682179288 4.87767901073938 0.0203333333333333 0.098 0.854525115718789 0.325261079418732 0.192290532987396 1.0813796978774 Q96DN6 MBD6 Q96DN6.S975.p_MBD6 Q96DN6_S975s _1_1_975_975 Q96DN6 Q96DN6 Methyl-CpG-binding domain protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13842.13842.3 13.87 13.87 2.165 3 1 1 0 546.274 1556.8482 S975s TMT10 968 (R) QDITLEPsPTAR (A) QDIT(0.0)LEPS(0.99)PT(0.0)AR s:Phosphorylated S MBD6 101883.9 4 5 2682.1 74.08 HUMAN 1 0.6828 4.8777 QDKASKMSSPETDEE-p Q6UWZ7;S386-p QDKASKMSSPETDEE 0.367895388273898 0.0045642445280084 0.132 0.618 8.0536715276153 34.2872212762578 0.132 0.618 0.15654270977307 0.000372630047938896 1.64446993576005 7.83546655226109 Q6UWZ7 FAM175A Q6UWZ7.S386.p_FAM175A Q6UWZ7_S386sS387sT390t_3_3_386_390 Q6UWZ7 Q6UWZ7|D6REL5|Q6UWZ7-2 BRCA1-A complex subunit Abraxas 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15425.15425.2 7.67 7.67 2.718 4 3 3 0 1304.5776 2368.2521 S386s S387s T390t TMT10 382 (K) ASKMssPEtDEEIEK (M) AS(0.0)KMS(0.99)S(0.99)PET(0.99)DEEIEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T ABRAXAS1 47061.3 1 6 2650.1 75.21 HUMAN 1 8.0537 34.2872 QDKATVLTTERKKRG-p Q9UMS4;T184-p QDKATVLTTERKKRG 0.786868911295895 0.0474245919623707 -0.0463333333333333 -0.296666666666667 2.01066362438466 17.7139668439839 -0.0463333333333333 -0.296666666666667 0.629409998412158 0.0169279089958489 -0.5111622832517 -3.4018778887004 Q9UMS4 PRPF19 Q9UMS4.T184.p_PRPF19 Q9UMS4_T184t _1_1_184_184 Q9UMS4 Q9UMS4 Pre-mRNA-processing factor 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9549.9549.2 8.68 8.68 1.114 3 1 1 0 600.3165 1119.6571 T184t TMT10 180 (K) ATVLtTER (K) AT(0.0)VLT(0.99)T(0.0)ER t:Phosphorylated T PRPF19 55636.2 1 2 4217.1 35.24 HUMAN 1 -2.0107 -17.714 QDKDGYKSCGLNPKL-p P46100;S617-p QDKDGYKSCGLNPKL 0.42081761725115 0.926454189312944 -0.232 0.0253333333333333 6.93420169545991 0.46891463035147 -0.232 0.0253333333333333 0.202572193354435 0.89765310398202 -1.44949058182305 0.134773054173091 P46100 ATRX P46100.S617.p_ATRX P46100_S617s _1_1_617_617 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11379.11379.3 8.88 2.68 8.88 2 1 1 0 669.351 1926.0722 S617s TMT10 613 (K) DGYKsCGLNPK (L) DGY(0.0)KS(0.99)CGLNPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ATRX 285034.2 2 11 18.1 1035.36 HUMAN 1 -6.9342 0.4689 QDKDYPLTPPPSPTV-p Q5THJ4;T1761-p QDKDYPLTPPPSPTV 0.360366078459975 0.109574720776024 0.192666666666667 0.219 8.24089443191221 12.6840784823473 0.192666666666667 0.219 0.149937600637537 0.0539004203076532 1.67692554062882 2.4529854078223 Q5THJ4 VPS13D Q5THJ4.T1761.p_VPS13D Q5THJ4_T1761t _1_1_1761_1761 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18283.18333.3 19.47 15.63 6.721 4 1 1 0 1040.5415 3039.6493 T1761t TMT10 1752 (K) EVQDKDYPLtPPPSPTVDEPK (I) EVQDKDY(0.0)PLT(0.99)PPPS(0.0)PT(0.0)VDEPK K:TMT10,t:Phosphorylated T VPS13D 495672.3 3 14 124.1 545.31 HUMAN 1 8.2409 12.6841 QDKKRQASPHLQDVR-p Q8N205;S331-p QDKKRQASPHLQDVR 0.584245183878784 0.465080937660668 0.112333333333333 -0.250333333333333 4.29549073051021 4.43330617468016 0.112333333333333 -0.250333333333333 0.371921193598492 0.360304248026316 0.973208084005834 -0.998919051403663 Q8N205 SYNE4 Q8N205.S331.p_SYNE4 Q8N205_S331s _1_1_331_331 Q8N205 Q8N205|Q8N205-2 Nesprin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6794.6794.3 10.21 10.21 99 1 1 1 0 487.2467 1379.7593 S331s TMT10 329 (R) QAsPHLQDVR (L) QAS(1.0)PHLQDVR s:Phosphorylated S SYNE4 43967.8 2 1 6674.1 10.21 HUMAN 1 4.2955 -4.4333 QDKPMDTSVLSEEGG-p Q12888-2;S400-p QDKPMDTSVLSEEGG 0.79189855843937 0.0117297467150433 -0.0426666666666667 -0.463666666666667 1.95506731284185 26.9949264038569 -0.0426666666666667 -0.463666666666667 0.637519199822175 0.00199759461967036 -0.498828221067261 -5.55975831853141 Q12888 TP53BP1 Q12888.2.S400.p_TP53BP1 Q12888-2_S400sS403s_2_2_400_403 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22039.22039.3 13.27 13.27 1.118 3 2 2 0 1023.8219 2909.517 S400s S403s TMT10 393 (R) QDKPMDTsVLsEEGGEPFQK (K) QDKPMDT(0.0)S(0.99)VLS(0.99)EEGGEPFQK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 11 87 3.1 2297.07 HUMAN 1 -1.9551 -26.9949 QDKSLRNSPKNEVLH-p Q6AI39;S980-p QDKSLRNSPKNEVLH 0.989020433252707 0.0219829462534665 0.00233333333333332 0.468666666666667 0.0986618232365486 22.6559510596059 0.00233333333333332 0.468666666666667 0.977538380120321 0.00542506435070358 0.029480182348543 4.46865408098027 Q6AI39 GLTSCR1L Q6AI39.S980.p_GLTSCR1L Q6AI39_S980s _1_1_980_980 Q6AI39 Q6AI39 BRD4-interacting chromatin-remodeling complex-associated protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14989.14989.5 20.07 20.07 1.641 3 1 1 0 550.7059 2669.5376 S980s TMT10 976 (K) SLRNsPKNEVLHTDIMK (G) S(0.0)LRNS(0.99)PKNEVLHT(0.0)DIMK K:TMT10,s:Phosphorylated S BICRAL 115766.5 7 4 2306.1 88.8 HUMAN 1 0.0987 22.656 QDKSVGQSPLRSPLK-p Q2LD37;S1301-p QDKSVGQSPLRSPLK 0.0692690746929337 0.181309503096108 -0.424666666666667 -0.139666666666667 24.9885784386346 9.75381295194045 -0.424666666666667 -0.139666666666667 0.00317060511660399 0.105832414600109 -5.04088462816356 -1.93820719092117 Q2LD37 KIAA1109 Q2LD37.S1301.p_KIAA1109 Q2LD37_S1301s _1_1_1301_1301 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7|Q2LD37-6|Q2LD37-2 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14296.14296.3 14.75 11.99 2.136 3 1 1 0 603.0136 1727.058 S1301s TMT10 1297 (K) SVGQsPLRSPLK (R) S(0.0)VGQS(0.99)PLRS(0.0)PLK K:TMT10,s:Phosphorylated S KIAA1109 559693.9 3 4 143.1 520.8 HUMAN 1 -24.9886 -9.7538 QDLAPPCSPEPAGMA-p Q6ZSZ6;S364-p QDLAPPCSPEPAGMA 0.22320926423064 0.129109098627485 0.2 0.163666666666667 12.5218541717571 11.7172833451383 0.2 0.163666666666667 0.0559518670250717 0.0673397757015355 2.42525390736636 2.28117981317309 Q6ZSZ6 TSHZ1 Q6ZSZ6.S364.p_TSHZ1 Q6ZSZ6_S364s _1_1_364_364 Q6ZSZ6 Q6ZSZ6|Q6ZSZ6-2 Teashirt homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30467.30467.4 15.42 10.11 9.525 3 1 1 0 812.9055 3168.6321 S364s TMT10 355 (R) ALQDLAPPCsPEPAGMAAEVALSESAK (D) ALQDLAPPCS(0.99)PEPAGMAAEVALS(0.0)ES(0.0)AK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TSHZ1 118884.1 1 1 4512.1 30.47 HUMAN 1 12.5219 11.7173 QDLDCSSSDDEGAAQ-p P08240;S298-p QDLDCSSSDDEGAAQ 0.936107507392066 0.246102119630895 0.0123333333333333 -0.168666666666667 0.560384180505396 8.02353505021457 0.0123333333333333 -0.168666666666667 0.878944761208254 0.157632765543264 0.159652824087857 -1.63872205932986 P08240 SRPR P08240.S298.p_SRPR P08240_S296sS297sS298s_3_3_296_298 P08240 P08240|P08240-2 Signal recognition particle receptor subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14386.15007.4 27.22 27.22 11.98 9 3 3 0 1024.9476 3856.871 S296s S297s S298s TMT10 283 (R) GTGSGGQLQDLDCsssDDEGAAQNSTKPSATK (G) GT(0.0)GS(0.0)GGQLQDLDCS(0.99)S(0.99)S(0.99)DDEGAAQNS(0.0)T(0.0)KPS(0.0)AT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SRPRA 70266.4 20 11 1857.1 110.87 HUMAN 1 0.5604 -8.0235 QDLIQHGSPINNECH-p Q5VWN6;S1025-p QDLIQHGSPINNECH 0.699674004566978 0.504779194971354 0.061 -0.072 2.9137745083876 3.97853273737597 0.061 -0.072 0.511237319566857 0.400079893804546 0.702843848114017 -0.912869889583815 Q5VWN6 FAM208B Q5VWN6.S1025.p_FAM208B Q5VWN6_S1025s _1_1_1025_1025 Q5VWN6 Q5VWN6 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18511.18511.5 23.96 23.96 4.987 4 1 1 0 605.8942 2945.4737 S1025s TMT10 1014 (K) TGTLQDLIQHGsPINNECHPSLER (K) T(0.0)GT(0.0)LQDLIQHGS(0.99)PINNECHPS(0.0)LER C:Carbamidomethylation,s:Phosphorylated S FAM208B 271861.7 4 9 275.1 391.61 HUMAN 1 2.9138 -3.9785 QDLRRTESDSGLKKG-p Q12802-2;S2502-p QDLRRTESDSGLKKG 0.137301954068809 0.0620782467203842 -0.414333333333333 -0.451 17.6791287255119 16.0670283165131 -0.414333333333333 -0.451 0.0170642469479753 0.0247341601440326 -3.39761580706081 -3.07888418546611 Q12802 AKAP13 Q12802.2.S2502.p_AKAP13 Q12802-2_S2502s _1_1_2502_2502 Q12802-2 Q12802-2|Q12802-4|A8MYJ1|A0A087WTD7 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6666.6666.4 9.62 5.34 1.164 3 1 1 0 472.7681 1808.0845 S2502s TMT10 2499 (R) RTEsDSGLKK (G) RT(0.0)ES(0.99)DS(0.0)GLKK K:TMT10,s:Phosphorylated S AKAP13 310921 3 24 66.1 683.25 HUMAN 1 -17.6791 -16.067 QDLRSAVSPDLHITP-p Q99569;S406-p QDLRSAVSPDLHITP 0.936107507392066 0.591220956508496 0.024 0.0936666666666667 0.5599332961765 3.08890620363705 0.024 0.0936666666666667 0.87903601794949 0.491031529778187 0.159531256756185 0.738307617068504 Q99569 PKP4 Q99569.S406.p_PKP4 Q99569_S406s _1_1_406_406 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20094.20094.3 13.44 13.44 2.244 4 1 1 0 688.6846 1984.0701 S406s TMT10 403 (R) SAVsPDLHITPIYEGR (T) S(0.0)AVS(0.99)PDLHIT(0.0)PIY(0.0)EGR s:Phosphorylated S PKP4 132664.7 1 14 122.1 546.31 HUMAN 1 0.5599 3.0889 QDLRSCLSPKPPQGQ-p Q8NCF5;S234-p QDLRSCLSPKPPQGQ 0.565856073226583 0.212107145249102 0.078 -0.138 4.55510190102643 8.85977651740664 0.078 -0.138 0.350340067973466 0.130023648488047 1.02185819573455 -1.78345913858146 Q8NCF5 NFATC2IP Q8NCF5.S234.p_NFATC2IP Q8NCF5_S234s _1_1_234_234 Q8NCF5 Q8NCF5 NFATC2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22367.22367.3 23.23 23.26 1.779 4 1 1 0 1390.0334 4088.101 S234s TMT10 231 (R) SCLsPKPPQGQEQQGQEDEVVLVEGPTLPETPR (L) S(0.0)CLS(0.99)PKPPQGQEQQGQEDEVVLVEGPT(0.0)LPET(0.0)PR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NFATC2IP 45987.1 4 8 477.1 300.69 HUMAN 1 4.5551 -8.8598 QDNLFDISTEEGSTK-p Q14690;S36-p QDNLFDISTEEGSTK 0.113798805771488 0.00277640754992628 0.624666666666667 -0.819333333333333 19.6811813906689 38.7167276597188 0.624666666666667 -0.819333333333333 0.0107617242773071 0.000134377709457916 3.81086008048835 -9.56888038927466 Q14690 PDCD11 Q14690.S36.p_PDCD11 Q14690_S36s _1_1_36_36 Q14690 Q14690 Protein RRP5 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25622.25641.3 24.81 24.81 1.204 5 1 1 0 1004.4818 2931.4624 S36s TMT10 22 (K) AFQQSVEQDNLFDIsTEEGSTK (R) AFQQS(0.0)VEQDNLFDIS(0.99)T(0.0)EEGS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S PDCD11 210066.3 3 1 1510.1 135.04 HUMAN 1 19.6812 -38.7167 QDNPFRASPKLKSSC-p Q9UBK2-3;S318-p QDNPFRASPKLKSSC 0.404766243702161 0.316869202637289 0.135666666666667 -0.108666666666667 7.25193239999077 6.59564480747813 0.135666666666667 -0.108666666666667 0.18828111433608 0.218995665578986 1.50504457653629 -1.38966830447068 Q9UBK2 PPARGC1A Q9UBK2.3.S318.p_PPARGC1A Q9UBK2-3_S318s _1_1_318_318 Q9UBK2-3 Q9UBK2-3|Q9UBK2-4|Q9UBK2-9 Isoform B5 of Peroxisome proliferator-activated receptor gamma coactivator 1-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11251.11251.3 10.43 4.26 99 1 1 1 0 628.3243 1802.9914 S318s TMT10 309 (K) ANQDNPFRAsPK (L) ANQDNPFRAS(1.0)PK K:TMT10,s:Phosphorylated S PPARGC1A 92795 1 1 6636.1 10.43 HUMAN 1 7.2519 -6.5956 QDNYVSWSDSEDDDE-p Q9UPY3;S413-p QDNYVSWSDSEDDDE 0.199704507240093 0.0304177778373826 -0.455 0.42 13.6073936549536 20.5065288878715 -0.455 0.42 0.0435773317229964 0.00889912098700736 -2.6211136565371 3.98466033393172 Q9UPY3 DICER1 Q9UPY3.S413.p_DICER1 Q9UPY3_S413sS415s_2_2_413_415 Q9UPY3 Q9UPY3|Q9UPY3-2 Endoribonuclease Dicer HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21056.21056.3 15.58 15.58 1.416 4 2 2 0 1136.783 3248.3915 S413s S415s TMT10 405 (R) NQDNYVSWsDsEDDDEDEEIEEK (E) NQDNY(0.0)VS(0.0)WS(0.99)DS(0.99)EDDDEDEEIEEK K:TMT10,s:Phosphorylated S DICER1 221416.1 1 11 942.1 197.99 HUMAN 1 -13.6074 20.5065 QDPPLIFSPTGKSAA-p Q9P2J2;S782-p QDPPLIFSPTGKSAA 1 0.00307215042650611 -4.62592926927149e-18 -0.654 0 37.7550464236914 -6.00925839494864e-18 -0.654 1 0.000167685441100145 -8.07851830403096e-17 -9.16604342027134 Q9P2J2 IGSF9 Q9P2J2.S782.p_IGSF9 Q9P2J2_S782s _1_1_782_782 Q9P2J2 Q9P2J2|Q9P2J2-2 Protein turtle homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21752.21752.3 18.87 13.03 3.376 2 1 1 0 703.0614 2027.2054 S782s TMT10 773 (R) LRQDPPLIFsPTGK (S) LRQDPPLIFS(0.99)PT(0.0)GK K:TMT10,s:Phosphorylated S IGSF9 127719.1 1 1 2693.1 73.81 HUMAN 1 0 -37.755 QDPVPGITPSSSSRT-p Q7KZ85;T1523-p QDPVPGITPSSSSRT 0.895249079123384 0.826029547778507 -0.021 -0.027 0.940525226309687 1.16117415267726 -0.021 -0.027 0.805281046369862 0.765389649227536 -0.25889254224144 -0.313800947645322 Q7KZ85 SUPT6H Q7KZ85.T1523.p_SUPT6H Q7KZ85_T1523t _1_1_1523_1523 Q7KZ85 Q7KZ85 Transcription elongation factor SPT6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11990.11990.2 18.25 18.25 1.815 6 1 1 0 1076.4951 2072.0246 T1523t TMT10 1513 (K) DHYQDPVPGItPSSSSR (T) DHY(0.0)QDPVPGIT(0.99)PS(0.0)S(0.0)S(0.0)S(0.0)R t:Phosphorylated T SUPT6H 200324.3 1 9 279.1 388.92 HUMAN 1 -0.9405 -1.1612 QDPVPKESPKSCFFD-p Q02224;S2639-p QDPVPKESPKSCFFD 0.234787342649998 0.0362883413765434 -0.280666666666667 -0.439666666666667 12.064533116308 19.3850096407111 -0.280666666666667 -0.439666666666667 0.0621651074102004 0.0115212350227496 -2.3437861913428 -3.74482471256387 Q02224 CENPE Q02224.S2639.p_CENPE Q02224_S2639s _1_1_2639_2639 Q02224 Q02224|Q02224-2|A0A087X0P0 Centromere-associated protein E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10615.10615.3 9.39 9.39 99 1 1 1 0 630.6764 1810.0475 S2639s Hydrogen 2630 (R) NLQDPVPKEsPK (S) NLQDPVPKES(1.0)PK K:TMT10-Lys-Only,s:Phosphorylated S CENPE 317778.9 1 4 2732.1 72.4 HUMAN 1 -12.0645 -19.385 QDPVTYISETDEEDD-p P35251;S108-p QDPVTYISETDEEDD 0.910892402066026 0.987020281482734 -0.018 -0.00199999999999998 0.796053137392631 0.0855720168100199 -0.018 -0.00199999999999998 0.83252002052407 0.980489163885008 -0.221907893349806 -0.0256039543948532 P35251 RFC1 P35251.S108.p_RFC1 P35251_S108s_1_1_108_108 P35251 P35251|P35251-2 Replication factor C subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25759.25759.3 18.35 18.35 2.645 4 1 1 0 991.105 2908.3633 Q101q S108s Hydrogen 101 (R) qDPVTYIsETDEEDDFMCKK (A) Q(1.0)DPVT(0.0)Y(0.0)IS(0.99)ET(0.0)DEEDDFMCKK C:Carbamidomethylation,K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S RFC1 128765.8 23 5 316.1 367.51 HUMAN 1 -0.7961 -0.0856 QDPVVHLSPNKQGHS-p O43166;S1270-p QDPVVHLSPNKQGHS 0.350954924577092 0.00362470329060457 -0.25 -0.799333333333333 8.45022130512419 36.2861712015489 -0.25 -0.799333333333333 0.142882114766239 0.000235170520206939 -1.71318660126226 -8.5799712226636 O43166 SIPA1L1 O43166.S1270.p_SIPA1L1 O43166_S1270s _1_1_1270_1270 O43166 O43166|O43166-2|O43166-3|F5GYF8 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13302.13302.2 15.41 11.97 99 1 1 1 0 886.4794 1691.9845 S1270s TMT10 1263 (R) QDPVVHLsPNK (Q) QDPVVHLS(1.0)PNK K:TMT10,s:Phosphorylated S SIPA1L1 201223.1 8 17 46.1 777.88 HUMAN 1 -8.4502 -36.2862 QDQAPSESPELKPLP-p P51825-2;S314-p QDQAPSESPELKPLP 0.971306772393636 0.462990009820054 0.00666666666666666 -0.105666666666667 0.247366165228873 4.4590804988025 0.00666666666666667 -0.105666666666667 0.944633587799235 0.358172262372341 0.0727301133728157 -1.00374275075558 P51825 AFF1 P51825.2.S314.p_AFF1 P51825-2_S314s _1_1_314_314 P51825-2 P51825-2|P51825-3 Isoform 2 of AF4/FMR2 family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19524.19524.5 14.87 14.87 1.103 6 1 1 0 966.0958 4746.4474 S314s TMT10 290 (K) SVAMQQKPTAYVRPMDGQDQAPSEsPELKPLPEDYR (Q) S(0.0)VAMQQKPT(0.0)AY(0.0)VRPMDGQDQAPS(0.0)ES(0.99)PELKPLPEDY(0.0)R K:TMT10,s:Phosphorylated S AFF1 133180 1 3 1199.1 167.15 HUMAN 1 0.2474 -4.4591 QDQEKHLSQEDNDLN-p Q8N4S0;S131-p QDQEKHLSQEDNDLN 0.796323249979386 0.00384264936759169 -0.053 0.624333333333333 1.90844426020707 35.7495161750389 -0.053 0.624333333333333 0.644400062663414 0.000266102149389178 -0.488429527391194 8.3742710500221 Q8N4S0 CCDC82 Q8N4S0.S131.p_CCDC82 Q8N4S0_S131s _1_1_131_131 Q8N4S0 Q8N4S0|Q8N4S0-2 Coiled-coil domain-containing protein 82 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9590.9590.3 8.42 8.42 99 1 1 1 0 617.6403 1770.9386 S131s TMT10 129 (K) HLsQEDNDLNK (Q) HLS(1.0)QEDNDLNK K:TMT10,s:Phosphorylated S CCDC82 64628.5 2 1 6969.1 8.42 HUMAN 1 -1.9084 35.7495 QDQISGLSQSEVKTD-p Q99590;S533-p QDQISGLSQSEVKTD 0.347879336040844 0.0116089740641819 -0.155333333333333 0.400333333333333 8.51918477875133 27.0688130655427 -0.155333333333333 0.400333333333333 0.140631148037483 0.00196389693998499 -1.72512851848243 5.57983086684497 Q99590 SCAF11 Q99590.S533.p_SCAF11 Q99590_S533s _1_1_533_533 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15092.15092.2 16.08 16.08 2.304 3 1 1 0 979.0078 1877.038 S533s TMT10 526 (K) QDQISGLsQSEVK (T) QDQIS(0.0)GLS(0.99)QS(0.0)EVK K:TMT10,s:Phosphorylated S SCAF11 166418 5 6 120.1 549.85 HUMAN 1 -8.5192 27.0688 QDQWKELSHEDLEPP-p P18031;S295-p QDQWKELSHEDLEPP 0.225645828512172 0.312714944476392 -0.388666666666667 0.189 12.4092831586431 6.67295682228015 -0.388666666666667 0.189 0.0574211233015567 0.215131654765247 -2.40514756136558 1.40326591712271 P18031 PTPN1 P18031.S295.p_PTPN1 P18031_S295s _1_1_295_295 P18031 P18031|B4DSN5 Tyrosine-protein phosphatase non-receptor type 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15296.15296.5 19.92 19.92 99 1 1 1 0 610.1219 2966.614 S295s TMT10 293 (K) ELsHEDLEPPPEHIPPPPRPPK (R) ELS(1.0)HEDLEPPPEHIPPPPRPPK K:TMT10,s:Phosphorylated S PTPN1 50536.5 1 3 1124.1 174.81 HUMAN 1 -12.4093 6.673 QDRARPPSGSSKATD-p C9J6P4;S310-p QDRARPPSGSSKATD 0.847442450755461 0.0773912002358919 0.0393333333333333 -0.390333333333333 1.39318748848439 14.7446824697555 0.0393333333333333 -0.390333333333333 0.725573230140828 0.0335375824235858 0.369791562293213 -2.82889435534048 C9J6P4 ZC3HAV1 C9J6P4.S310.p_ZC3HAV1 C9J6P4_S310s _1_1_310_310 C9J6P4 C9J6P4|Q7Z2W4 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7500.7500.4 14.59 8.54 1.21 8 1 1 0 714.6163 2775.475 S310s TMT10 306 (R) ARPPsGSSKATDLGGTSQAGTSQR (F) ARPPS(0.99)GS(0.0)S(0.0)KAT(0.0)DLGGT(0.0)S(0.0)QAGT(0.0)S(0.0)QR K:TMT10,s:Phosphorylated S ZC3HAV1 115909.2 4 7 361.1 343.37 HUMAN 1 1.3932 -14.7447 QDRFALVTPKKEGHW-p P49792;T1412-p QDRFALVTPKKEGHW 0.861400792751222 0.0159687474040441 0.026 -0.839666666666667 1.26624419686504 24.8260724431689 0.026 -0.839666666666667 0.747094570710457 0.0032914916347728 0.339391245331375 -4.99368442217256 P49792 RANBP2 P49792.T1412.p_RANBP2 P49792_T1412t _1_1_1412_1412 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17707.17707.3 15.02 8.83 8.652 3 1 1 0 780.7518 2260.2702 T1412t TMT10 1399 (K) TSPENVQDRFALVtPK (K) T(0.0)S(0.0)PENVQDRFALVT(0.99)PK K:TMT10,t:Phosphorylated T RANBP2 362585.9 5 24 9.1 1298.62 HUMAN 1 1.2662 -24.8261 QDRHMLDSPQKSNIK-p Q8IX21-2;S68-p QDRHMLDSPQKSNIK 0.664425582516381 0.00112205987963851 0.0596666666666667 -1.227 3.32064388018572 49.3395850326942 0.0596666666666667 -1.227 0.465517071361429 1.1642372666796e-05 0.784819080784542 -15.2498560781593 Q8IX21 SLF2 Q8IX21.2.S68.p_SLF2 Q8IX21-2_S68s _1_1_68_68 Q8IX21-2 Q8IX21-2|B1AL16 Isoform 2 of SMC5-SMC6 complex localization factor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8777.8777.2 10.54 10.54 99 1 1 1 0 747.3824 1413.7924 S68s TMT10 64 (R) HMLDsPQK (S) HMLDS(1.0)PQK K:TMT10,s:Phosphorylated S SLF2 134456.8 3 2 1220.1 164.91 HUMAN 1 3.3206 -49.3396 QDRKDGSSPPLLEKQ-p Q6W2J9;S423-p QDRKDGSSPPLLEKQ 0.79189855843937 0.562188280975538 -0.0376666666666667 -0.0546666666666666 1.95516022174453 3.36961242027409 -0.0376666666666667 -0.0546666666666666 0.637505561478102 0.460297650335542 -0.498848892398351 -0.794415318419072 Q6W2J9 BCOR Q6W2J9.S423.p_BCOR Q6W2J9_S423s _1_1_423_423 Q6W2J9 Q6W2J9|Q6W2J9-2|Q6W2J9-4 BCL-6 corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17079.17079.2 13.52 13.14 1.402 2 1 1 0 790.92 1500.8674 S423s TMT10 420 (K) DGSsPPLLEK (Q) DGS(0.0)S(0.99)PPLLEK K:TMT10,s:Phosphorylated S BCOR 193725.6 14 3 459.1 305.76 HUMAN 1 -1.9552 -3.3696 QDRQAGASVKEESSS-p Q641Q2;S390-p QDRQAGASVKEESSS 0.286939443547328 0.592706723716139 -0.183 0.0606666666666667 10.2268716658261 3.07343834681824 -0.183 0.0606666666666667 0.0949101879476411 0.492783508527239 -2.02115484666845 0.735184741939983 Q641Q2 FAM21A Q641Q2.S390.p_FAM21A Q641Q2_S390s _1_1_390_390 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2|Q9Y4E1-4|Q9Y4E1-2|E7ESD2|Q9Y4E1-6|Q9Y4E1-3|J3KP36|F8W7U3|A0A087WYF6|Q9Y4E1-5 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7411.7411.5 17.02 17.02 6.145 5 1 1 0 535.4954 2593.4967 S390s TMT10 386 (R) QAGAsVKEESSSSKPGK (K) QAGAS(0.99)VKEES(0.0)S(0.0)S(0.0)S(0.0)KPGK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 5 28 12.1 1178.3 HUMAN 1 -10.2269 3.0734 QDSACRESGGAPKNT-p Q9BT25;S357-p QDSACRESGGAPKNT 0.0982861688091806 0.00211428234964463 -0.311333333333333 -0.750666666666667 21.3343753823882 41.6013801205191 -0.311333333333333 -0.750666666666667 0.00735465765144442 6.91611152693595e-05 -4.17135501514194 -10.8756248083499 Q9BT25 HAUS8 Q9BT25.S357.p_HAUS8 Q9BT25_S357s _1_1_357_357 Q9BT25 Q9BT25|Q9BT25-3|Q9BT25-2 HAUS augmin-like complex subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17123.17123.3 15.08 15.08 2.529 3 1 1 0 837.723 2431.1865 S357s TMT10 346 (R) WYFNQDSACREsGGAPK (N) WY(0.0)FNQDS(0.0)ACRES(0.99)GGAPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HAUS8 44970.7 1 2 5092.1 23.09 HUMAN 1 -21.3344 -41.6014 QDSFVEVSPVCPRPR-p J3KNP4;S818-p QDSFVEVSPVCPRPR 0.3317060213419 0.11219674479053 0.258333333333333 -0.208 8.95023407738501 12.5346022674188 0.258333333333333 -0.208 0.12734344432029 0.0557878691063818 1.79974800917155 -2.42625849856178 J3KNP4 SEMA4B J3KNP4.S818.p_SEMA4B J3KNP4_S818s _1_1_818_818 J3KNP4 J3KNP4|Q9NPR2 Semaphorin-4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19107.19107.3 21.91 21.91 7.942 3 1 1 0 883.4584 2568.3918 S818s TMT10 806 (K) RPLSIQDSFVEVsPVCPRPR (V) RPLS(0.0)IQDS(0.0)FVEVS(0.99)PVCPRPR C:Carbamidomethylation,s:Phosphorylated S SEMA4B 94133.5 5 4 2228.1 92.61 HUMAN 1 8.9502 -12.5346 QDSPKERSPQSPGGN-p Q9H609;S20-p QDSPKERSPQSPGGN 0.366012504856389 0.0176939610004348 -0.132 -0.392 8.10186608984694 24.1357934473144 -0.132 -0.392 0.154815126159504 0.00385851910783963 -1.65282716667363 -4.82242780431094 Q9H609 ZNF576 Q9H609.S20.p_ZNF576 Q9H609_S20s _1_1_20_20 Q9H609 Q9H609 Zinc finger protein 576 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9638.9638.4 13.43 13.43 1.74 2 1 1 0 611.564 2363.2654 S20s TMT10 18 (K) ERsPQSPGGNICHLGAPK (C) ERS(0.99)PQS(0.0)PGGNICHLGAPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF576 19403.6 2 1 4274.1 34.41 HUMAN 1 -8.1019 -24.1358 QDSPRNFSPSASAHF-p O15021;S266-p QDSPRNFSPSASAHF 0.682264803548482 0.626434449053383 -0.0696666666666667 0.07 3.11157029142007 2.76235683020858 -0.0696666666666667 0.07 0.488475707800232 0.529376084001748 -0.742983794455849 0.671626602514116 O15021 MAST4 O15021.S266.p_MAST4 O15021_S266sS270s_2_2_266_270 O15021 O15021|J3QT34|O15021-1|E7EWQ5|O15021-3|O15021-2|D6RAK1|F8WBH1 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19356.19356.3 10.07 10.07 1.305 4 2 2 0 638.9423 1754.8812 S266s S270s TMT10 264 (R) NFsPSAsAHFSFAR (S) NFS(0.99)PS(0.0)AS(0.99)AHFS(0.0)FAR s:Phosphorylated S MAST4 286597.7 1 17 121.99 549.41 HUMAN 1 -3.1116 2.7624 QDSVSSPSPQKQKSA-p Q70CQ4;S1111-p QDSVSSPSPQKQKSA 0.84768925371821 0.0805568106252645 0.0326666666666667 -0.374333333333333 1.38904971063491 14.5109378119949 0.0326666666666667 -0.374333333333333 0.726264855670093 0.0353920907436459 0.368808595770049 -2.78547505090272 Q70CQ4 USP31 Q70CQ4.S1111.p_USP31 Q70CQ4_S1111s _1_1_1111_1111 Q70CQ4 Q70CQ4|I3L4X5 Ubiquitin carboxyl-terminal hydrolase 31 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7210.7210.3 11.21 11.21 2.725 5 1 1 0 595.6331 1704.9169 S1111s TMT10 1103 (K) SQDSVSSPsPQK (Q) S(0.0)QDS(0.0)VS(0.0)S(0.0)PS(0.99)PQK K:TMT10,s:Phosphorylated S USP31 148417.6 1 6 1855.1 110.95 HUMAN 1 1.389 -14.5109 QDSYEFVSPSPPADV-p Q99728;S184-p QDSYEFVSPSPPADV 0.306566064260078 0.106019867045147 0.200333333333333 0.173666666666667 9.61386379128966 12.8768256018031 0.200333333333333 0.173666666666667 0.109298353802444 0.051560537945382 1.91469631643836 2.487545684317 Q99728 BARD1 Q99728.S184.p_BARD1 Q99728_S184sS186s_2_2_184_186 Q99728 Q99728|Q99728-2|Q99728-3 BRCA1-associated RING domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18694.18694.3 12.42 12.42 2.75 6 2 2 0 957.737 2711.2634 S184s S186s TMT10 172 (K) DASAQQDSYEFVsPsPPADVSER (A) DAS(0.0)AQQDS(0.0)Y(0.0)EFVS(0.99)PS(0.99)PPADVS(0.0)ER s:Phosphorylated S BARD1 88129.6 1 8 1495.1 136.58 HUMAN 1 9.6139 12.8768 QDTSDLMSPSKRSSQ-p Q9NVR2;S231-p QDTSDLMSPSKRSSQ 0.936234507605524 0.00575422933881225 -0.014 -0.692 0.557024113836554 32.4114395723585 -0.014 -0.692 0.879625049786422 0.000573926189187406 -0.1587466469553 -7.18809408359634 Q9NVR2 INTS10 Q9NVR2.S231.p_INTS10 Q9NVR2_S231s _1_1_231_231 Q9NVR2 Q9NVR2 Integrator complex subunit 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11908.11908.3 23.37 23.37 2 6 1 1 0 980.7986 2860.4147 S231s TMT10 213 (R) STQIENQHQGAQDTSDLMsPSK (R) S(0.0)T(0.0)QIENQHQGAQDT(0.0)S(0.0)DLMS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S INTS10 83261.5 10 1 3258.1 55.7 HUMAN 1 -0.557 -32.4114 QDVAQLRSPLPRGII-p Q9BSJ8-2;S324-p QDVAQLRSPLPRGII 0.936107507392066 0.271509586312301 0.0676666666666666 -0.239666666666667 0.559466379845894 7.45717320706688 0.0676666666666666 -0.239666666666667 0.879130529474082 0.17959021868774 0.159405356507545 -1.54037137849587 Q9BSJ8 ESYT1 Q9BSJ8.2.S324.p_ESYT1 Q9BSJ8-2_S324s _1_1_324_324 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36282.36282.4 19.29 19.29 99 1 1 1 0 662.8812 2568.5439 S324s TMT10 308 (R) LLVPLVPDLQDVAQLRsPLPR (G) LLVPLVPDLQDVAQLRS(1.0)PLPR s:Phosphorylated S ESYT1 124514 2 4 400.1 328.2 HUMAN 1 0.5595 -7.4572 QDVSGQLSSSKKPAR-p Q15059;S680-p QDVSGQLSSSKKPAR 0.244161971200343 0.976942641938027 -0.336 -0.00533333333333334 11.7124160246604 0.144904448436552 -0.336 -0.00533333333333335 0.0674152885208632 0.967185005995411 -2.28142664813153 -0.0430731182975777 Q15059 BRD3 Q15059.S680.p_BRD3 Q15059_S680s _1_1_680_680 Q15059 Q15059 Bromodomain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11117.11117.3 13.34 11.45 1.278 4 1 1 0 648.354 1863.07 S680s TMT10 671 (K) RLQDVSGQLsSSK (K) RLQDVS(0.0)GQLS(0.99)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S BRD3 79825.3 1 4 1315.1 154.93 HUMAN 1 -11.7124 -0.1449 QDVVTGVSPLLFRKL-p Q6P0Q8;S66-p QDVVTGVSPLLFRKL 0.95686918828698 0.631151827880452 0.00866666666666665 -0.0466666666666667 0.376212136899767 2.71696113670063 0.00866666666666665 -0.0466666666666667 0.917019954964975 0.534938537875621 0.109146103506562 -0.662225261469005 Q6P0Q8 MAST2 Q6P0Q8.S66.p_MAST2 Q6P0Q8_S66s _1_1_66_66 Q6P0Q8 Q6P0Q8|Q6P0Q8-2 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25240.25240.4 23.15 20.72 2.085 3 1 1 0 723.8865 2812.5609 S66s TMT10 49 (R) TGPAGPEGKEQDVVTGVsPLLFR (K) T(0.0)GPAGPEGKEQDVVT(0.0)GVS(0.99)PLLFR K:TMT10,s:Phosphorylated S MAST2 197687.5 5 36 121.1 549.41 HUMAN 1 0.3762 -2.717 QDYEMRVSPSDTTPL-p Q9HCK8;S2046-p QDYEMRVSPSDTTPL 0.6012057414478 0.321711826919732 0.0783333333333333 0.126 4.0811357101832 6.51098661802849 0.0783333333333333 0.126 0.390738701550981 0.223306486378718 0.932607326914171 1.37475851707788 Q9HCK8 CHD8 Q9HCK8.S2046.p_CHD8 Q9HCK8_S2046s _1_1_2046_2046 Q9HCK8 Q9HCK8|Q9HCK8-2 Chromodomain-helicase-DNA-binding protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14764.14764.3 14.76 10.32 1.46 8 1 1 0 976.8106 2848.4461 S2046s TMT10 2034 (R) SRPTPQDYEMRVsPSDTTPLVSR (S) S(0.0)RPT(0.0)PQDY(0.0)EMRVS(0.99)PS(0.0)DT(0.0)T(0.0)PLVS(0.0)R s:Phosphorylated S CHD8 292339.6 7 7 419.1 320.67 HUMAN 1 4.0811 6.511 QDYKKRLSVELTSSL-p P35222;S675-p QDYKKRLSVELTSSL 0.936325615209413 0.157640692808105 -0.0126666666666667 0.151666666666667 0.5560060764585 10.5528248619416 -0.0126666666666667 0.151666666666667 0.879831268419564 0.0880475982428558 -0.158471984210051 2.07704760371788 P35222 CTNNB1 P35222.S675.p_CTNNB1 P35222_S675s _1_1_675_675 P35222 P35222|B4DGU4 Catenin beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24359.24966.3 14.93 14.93 7.587 4 1 1 0 572.9799 1636.9584 S675s TMT10 673 (K) RLsVELTSSLFR (T) RLS(0.99)VELT(0.0)S(0.0)S(0.0)LFR s:Phosphorylated S CTNNB1 86122.7 45 4 956.1 195.35 HUMAN 1 -0.556 10.5528 QDYKVSYSLAKSCKS-p Q92896-2;S371-p QDYKVSYSLAKSCKS 0.426989315920836 0.800399225536847 -0.128666666666667 0.0416666666666667 6.80815802448618 1.3524330937926 -0.128666666666667 0.0416666666666667 0.208537516684539 0.732414090103799 -1.42738871386489 0.360049631322653 Q92896 GLG1 Q92896.2.S371.p_GLG1 Q92896-2_S371s _1_1_371_371 Q92896-2 Q92896-2|Q92896-3 Isoform 2 of Golgi apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15906.15906.2 10.31 3.64 2.17 3 1 1 0 653.3652 1225.7556 S371s TMT10 368 (K) VSYsLAK (S) VS(0.0)Y(0.0)S(0.99)LAK K:TMT10,s:Phosphorylated S GLG1 141099.2 1 1 3481.1 49.97 HUMAN 1 -6.8082 1.3524 QDYNLRWSGLLVTVG-p Q96M27-3;S390-p QDYNLRWSGLLVTVG 0.137417420773049 0.364555667490985 -0.501666666666667 -0.159333333333333 17.6533743453302 5.80891339662523 -0.501666666666667 -0.159333333333333 0.0171657413931714 0.262487520415133 -3.39245156702152 -1.25015868688909 Q96M27 PRRC1 Q96M27.3.S390.p_PRRC1 Q96M27-3_S390s _1_1_390_390 Q96M27-3 Q96M27-3 Isoform 3 of Protein PRRC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.37626.37626.3 14.51 9.56 4.932 2 1 1 0 690.0551 1988.1832 S390s TMT10 389 (R) WsGLLVTVGEVLEK (S) WS(0.99)GLLVT(0.0)VGEVLEK K:TMT10,s:Phosphorylated S PRRC1 48962.9 1 3 3034.1 62.55 HUMAN 1 -17.6534 -5.8089 QDYRLPDSDDDEDEE-p Q96K21;S354-p QDYRLPDSDDDEDEE 0.328765502708435 0.0482547786656915 0.163333333333333 0.246 9.03242667218437 17.6038013827138 0.163333333333333 0.246 0.124956062822022 0.0173628039595309 1.8139763391768 3.37983093961483 Q96K21 ZFYVE19 Q96K21.S354.p_ZFYVE19 Q96K21_S354s _1_1_354_354 Q96K21 Q96K21|Q96K21-2|H3BRF9|Q96K21-4 Abscission/NoCut checkpoint regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16855.16855.2 25.82 25.82 3.07 4 1 1 0 1402.1039 2723.2279 S354s Hydrogen 344 (R) VTLQDYRLPDsDDDEDEETAIQR (V) VT(0.0)LQDY(0.0)RLPDS(0.99)DDDEDEET(0.0)AIQR s:Phosphorylated S ZFYVE19 52458.3 13 4 971.1 193.47 HUMAN 1 9.0324 17.6038 QEAAELLSEPEEESE-p A0A0A0MTC1;S1307-p QEAAELLSEPEEESE 0.776844378653103 0.106472156336157 0.0533333333333333 0.225 2.10424143711746 12.8501693391268 0.0533333333333333 0.225 0.615993112500563 0.0518779810388999 0.531765268992882 2.48275951043282 A0A0A0MTC1 RNF213 A0A0A0MTC1.S1307.p_RNF213 A0A0A0MTC1_S1307s _1_1_1307_1307 A0A0A0MTC1 Q63HN8-4|A0A0A0MTC1|A0A0A0MTR7 E3 ubiquitin-protein ligase RNF213 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19965.19965.4 24 24 6.507 3 1 1 0 920.685 3599.7488 S1307s TMT10 1288 (R) EAAEPLSEPKEDQEAAELLsEPEEESER (H) EAAEPLS(0.0)EPKEDQEAAELLS(0.99)EPEEES(0.0)ER K:TMT10,s:Phosphorylated S RNF213 604064.3 3 2 2477.1 81.83 HUMAN 1 2.1042 12.8502 QEAERKNSLISSLEE-p Q14980;S1225-p QEAERKNSLISSLEE 0.302189226524812 0.0132589498636546 0.167 0.465666666666667 9.73859861171385 26.1222285411239 0.167 0.465666666666667 0.10620382020758 0.00244217705101771 1.93632977103911 5.32669335698695 Q14980 NUMA1 Q14980.S1225.p_NUMA1 Q14980_S1225s _1_1_1225_1225 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-3|Q14980-4 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.34695.34969.4 20.01 20.01 1.369 4 1 1 0 618.0894 2389.3703 S1225s TMT10 1223 (R) KNsLISSLEEEVSILNR (Q) KNS(0.99)LIS(0.0)S(0.0)LEEEVS(0.0)ILNR K:TMT10,s:Phosphorylated S NUMA1 239339.3 16 12 31.1 900.97 HUMAN 1 9.7386 26.1222 QEAKEPESWDGGRLG-p Q12774;S381-p QEAKEPESWDGGRLG 0.662291570491154 0.324075847356242 0.0893333333333333 -0.153 3.35275513967726 6.47190559558608 0.0893333333333334 -0.153 0.462087782513808 0.225325031494475 0.791193713978818 -1.36786829067516 Q12774 ARHGEF5 Q12774.S381.p_ARHGEF5 Q12774_S381s _1_1_381_381 Q12774 Q12774|A5YM69 Rho guanine nucleotide exchange factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13395.13395.3 11.76 11.76 4.542 2 1 1 0 841.7456 2443.2618 S381s TMT10 368 (K) GVPVSGQEAKEPEsWDGGR (L) GVPVS(0.0)GQEAKEPES(0.99)WDGGR K:TMT10,s:Phosphorylated S ARHGEF5 177994.4 1 10 487.1 295.28 HUMAN 1 3.3528 -6.4719 QEAKYQASHPNLRKL-p O95721;S163-p QEAKYQASHPNLRKL 0.435048063020442 0.873391882526886 0.225666666666667 0.0593333333333333 6.65503035328212 0.827551845589413 0.225666666666667 0.0593333333333333 0.216021493676054 0.826503725364304 1.40048243202521 0.23002192351664 O95721 SNAP29 O95721.S163.p_SNAP29 O95721_S163s _1_1_163_163 O95721 O95721 Synaptosomal-associated protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5429.5429.3 14.14 11.53 7.074 2 1 1 0 465.5643 1314.7116 S163s TMT10 160 (K) YQAsHPNLR (K) Y(0.0)QAS(0.99)HPNLR s:Phosphorylated S SNAP29 28969.8 2 3 3308.1 54.3 HUMAN 1 6.655 0.8276 QEALDYFSDKESGKQ-p Q9NYF8;S385-p QEALDYFSDKESGKQ 0.473939665716417 0.00508786135659444 -0.166666666666667 0.519666666666667 5.97223310260872 33.3965232426627 -0.166666666666667 0.519666666666667 0.252799778879525 0.000457454259428412 -1.27961554471044 7.52215398803374 Q9NYF8 BCLAF1 Q9NYF8.S385.p_BCLAF1 Q9NYF8_S385s _1_1_385_385 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|A0A1W2PQ43 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21110.21110.3 23.38 18.03 4.846 2 1 1 0 928.4258 2703.2939 S385s TMT10 369 (K) GRAEGEWEDQEALDYFsDK (E) GRAEGEWEDQEALDY(0.0)FS(0.99)DK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 28 16 10.1 1293.04 HUMAN 1 -5.9722 33.3965 QEANFGGSPRRAYPT-p Q5JTC6;S740-p QEANFGGSPRRAYPT 0.786965652821659 0.424037546319303 0.043 -0.094 2.00960213859937 4.95988858097606 0.043 -0.094 0.629563855172798 0.3191619735624 0.510927454055049 -1.09648220608081 Q5JTC6 AMER1 Q5JTC6.S740.p_AMER1 Q5JTC6_S740s _1_1_740_740 Q5JTC6 Q5JTC6|Q5JTC6-2 APC membrane recruitment protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33092.33092.4 18.34 16.84 4.607 4 1 1 0 1026.7192 4023.875 S740s TMT10 712 (K) KDQSTCLMQLFQSDAMFEPDMQEANFGGsPR (R) KDQS(0.0)T(0.0)CLMQLFQS(0.0)DAMFEPDMQEANFGGS(0.99)PR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S AMER1 125168.2 1 3 2991.1 63.87 HUMAN 1 2.0096 -4.9599 QEAREVNSQEEEEEE-p Q96RL1;S101-p QEAREVNSQEEEEEE 0.473498904022036 0.0166498707819258 0.117666666666667 0.503333333333333 5.97887906026265 24.5603345196006 0.117666666666667 0.503333333333333 0.252413218185182 0.00349918213195411 1.28080013294758 4.92726864755295 Q96RL1 UIMC1 Q96RL1.S101.p_UIMC1 Q96RL1_S101s _1_1_101_101 Q96RL1 Q96RL1|Q96RL1-3|Q96RL1-2|D6RCQ3|Q96RL1-5 BRCA1-A complex subunit RAP80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17286.17286.4 18.64 18.64 4.384 2 1 1 0 808.3873 3150.5625 S101s TMT10 91 (K) MSEQEAREVNsQEEEEEELLRK (A) MS(0.0)EQEAREVNS(0.99)QEEEEEELLRK K:TMT10,s:Phosphorylated S UIMC1 80924.2 3 2 339.1 354.34 HUMAN 1 5.9789 24.5603 QEARFAQSAPGSPLS-p Q01167;S424-p QEARFAQSAPGSPLS 0.132277812902063 0.0827422874054142 0.276 0.260333333333333 18.1360891525226 14.3322747131224 0.276 0.260333333333333 0.0153599953686789 0.0368784389019267 3.48985961982609 2.75243257113105 Q01167 FOXK2 Q01167.S424.p_FOXK2 Q01167_S424sS428s_2_2_424_428 Q01167 Q01167|Q01167-2 Forkhead box protein K2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28570.28570.2 12.02 12.02 1.564 5 2 2 0 1286.6455 2412.3448 S424s S428s TMT10 421 (R) FAQsAPGsPLSSQPVLITVQR (Q) FAQS(0.99)APGS(0.99)PLS(0.0)S(0.0)QPVLIT(0.0)VQR s:Phosphorylated S FOXK2 69288.9 3 15 689.1 243.19 HUMAN 1 18.1361 14.3323 QEARSDKSPDLAPTP-p Q9BY44;S506-p QEARSDKSPDLAPTP 0.863414912287134 0.756036718889476 0.0263333333333333 -0.0373333333333334 1.24403304859986 1.6794704859113 0.0263333333333333 -0.0373333333333334 0.750925228100591 0.679286449653437 0.334019015910887 -0.436539488656872 Q9BY44 EIF2A Q9BY44.S506.p_EIF2A Q9BY44_S506s _1_1_506_506 Q9BY44 Q9BY44|F8WAE5|Q9BY44-3|Q9BY44-4|Q9BY44-2 Eukaryotic translation initiation factor 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10890.10890.2 17.63 17.63 2.464 5 1 1 0 1202.1192 2323.2658 S506s TMT10 503 (R) SDKsPDLAPTPAPQSTPR (N) S(0.0)DKS(0.99)PDLAPT(0.0)PAPQS(0.0)T(0.0)PR K:TMT10,s:Phosphorylated S EIF2A 65559.4 8 6 1639.1 124.84 HUMAN 1 1.244 -1.6795 QEAVKKGSTAVGVRG-p O14818;S30-p QEAVKKGSTAVGVRG 0.270982153128896 0.0774026051251038 -0.186666666666667 0.229666666666667 10.7481941405972 14.7432084523434 -0.186666666666667 0.229666666666667 0.0841745078689752 0.0335489671804052 -2.11205124920351 2.82861986224919 O14818 PSMA7 O14818.S30.p_PSMA7 O14818_S30s _1_1_30_30 O14818 O14818|O14818-4 Proteasome subunit alpha type-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6279.6279.2 8.05 8.05 8.047 2 1 1 0 706.9065 1332.8364 S30s TMT10 28 (K) KGsTAVGVR (G) KGS(0.99)T(0.0)AVGVR K:TMT10,s:Phosphorylated S PSMA7 28057.5 2 2 2979.1 64.18 HUMAN 1 -10.7482 14.7432 QEAVQEVSFDEPQEE-p O60307;S1273-p QEAVQEVSFDEPQEE 0.647342264442296 0.80509103970738 -0.112 -0.0826666666666666 3.53848547809255 1.31797359147979 -0.112 -0.0826666666666666 0.442742743810236 0.738248614961605 -0.827814405175686 -0.351804654545225 O60307 MAST3 O60307.S1273.p_MAST3 O60307_S1273s _1_1_1273_1273 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30325.30325.5 23.8 21.8 4.19 5 1 1 0 1049.3247 5162.6421 S1273s TMT10 1265 (K) KQEAVQEVsFDEPQEEATGLPTSVPQIAVEGEEAVPVALGPTGRD (-) KQEAVQEVS(0.99)FDEPQEEAT(0.0)GLPT(0.0)S(0.0)VPQIAVEGEEAVPVALGPT(0.0)GRD K:TMT10,s:Phosphorylated S MAST3 143933.5 1 33 121.3 549.41 HUMAN 1 -3.5385 -1.318 QECETEVSPSQTGGS-p Q12888-2;S1293-p QECETEVSPSQTGGS 0.603627572916075 0.02316453832203 0.0903333333333333 0.303 4.04803982852677 22.3215135269887 0.0903333333333333 0.303 0.393727742863387 0.00585933929507255 0.926301385444132 4.39110983275822 Q12888 TP53BP1 Q12888.2.S1293.p_TP53BP1 Q12888-2_S1293s _1_1_1293_1293 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21972.21972.4 37.1 35.41 1.118 12 1 1 0 1297.6074 5107.4338 S1293s TMT10 1273 (R) KVTEETEEPIVECQECETEVsPSQTGGSSGDLGDISSFSSK (A) KVT(0.0)EET(0.0)EEPIVECQECET(0.0)EVS(0.99)PS(0.0)QT(0.0)GGS(0.0)S(0.0)GDLGDIS(0.0)S(0.0)FS(0.0)S(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TP53BP1 216167.2 4 54 3.1 2297.07 HUMAN 1 4.048 22.3215 QECILDISEHTLSEN-p Q9UBU7;S465-p QECILDISEHTLSEN 0.957810192524261 0.00354425123931495 0.00933333333333332 -0.896666666666667 0.363937452095841 36.568429956644 0.00933333333333333 -0.896666666666667 0.919615441036951 0.000220372299984177 0.105716848999387 -8.68993727984079 Q9UBU7 DBF4 Q9UBU7.S465.p_DBF4 Q9UBU7_S465sS470s_2_2_465_470 Q9UBU7 Q9UBU7 Protein DBF4 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22649.22649.5 14.74 14.74 1.12 4 2 2 0 855.8193 4115.1322 S465s S470s TMT10 456 (K) NKQECILDIsEHTLsENDLEELRVDHYK (C) NKQECILDIS(0.99)EHT(0.0)LS(0.99)ENDLEELRVDHY(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DBF4 77598.3 1 10 880.1 207.32 HUMAN 1 0.3639 -36.5684 QECILPDSPLYHNKV-p Q9NXE4-4;S130-p QECILPDSPLYHNKV 0.80012376994327 0.497131819055959 0.0356666666666667 0.0686666666666667 1.86717118401784 4.06036578657058 0.0356666666666667 0.0686666666666667 0.650553296081012 0.392611866087849 0.479180989265833 0.928492110944204 Q9NXE4 SMPD4 Q9NXE4.4.S130.p_SMPD4 Q9NXE4-4_S130s _1_1_130_130 Q9NXE4-4 Q9NXE4-4|B1PBA3|H7BXF4|Q9NXE4-2|Q9NXE4-6|Q9NXE4-3 Isoform 4 of Sphingomyelin phosphodiesterase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21707.21707.3 22.39 22.39 8.868 3 1 1 0 841.7581 2443.3056 S130s TMT10 120 (K) ASIQECILPDsPLYHNK (V) AS(0.0)IQECILPDS(0.99)PLY(0.0)HNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SMPD4 98945.3 4 1 1752.1 117.58 HUMAN 1 1.8672 4.0604 QEDDGEKSD______-p Q08117-2;S263-p QEDDGEKSD______ 0.624743051998513 0.0245137008897857 0.107333333333333 0.310333333333333 3.79721692583857 21.924690830298 0.107333333333333 0.310333333333333 0.417136610035292 0.0064199392275759 0.878163416492848 4.30020196894609 Q08117 AES Q08117.2.S263.p_AES Q08117-2_S263s _1_1_263_263 Q08117-2 Q08117-2|K7EQH5 Isoform 2 of Amino-terminal enhancer of split HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4322.4322.4 19.4 19.4 10.133 2 1 1 0 749.5863 2915.3494 S263s TMT10 245 (K) EDKNGHDGDTHQEDDGEKsD (-) EDKNGHDGDT(0.0)HQEDDGEKS(0.99)D K:TMT10,s:Phosphorylated S AES 29375.7 6 1 3803.1 42.79 HUMAN 1 3.7972 21.9247 QEDEDDESEDPGKDL-p O60763-2;S963-p QEDEDDESEDPGKDL 0.560108690015517 0.833493897125893 -0.091 -0.0493333333333334 4.64471236604152 1.10804859671689 -0.091 -0.0493333333333334 0.343185368267887 0.774809862753831 -1.03852799064283 -0.300735850140243 O60763 USO1 O60763.2.S963.p_USO1 O60763-2_S953sS963s_2_2_953_963 O60763-2 O60763-2 Isoform 2 of General vesicular transport factor p115 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20764.20764.4 18.19 18.19 99 2 2 2 0 1114.4614 4294.8795 S953s S963s TMT10 940 (K) DLGHPVEEEDELEsGDQEDEDDEsEDPGKDLDHI (-) DLGHPVEEEDELES(1.0)GDQEDEDDES(1.0)EDPGKDLDHI K:TMT10,s:Phosphorylated S USO1 110105.5 2 3 2134.1 96.34 HUMAN 1 -4.6447 -1.108 QEDLHRASLEGKSAK-p P29083;S268-p QEDLHRASLEGKSAK 0.709342868689964 0.237460212046038 -0.061 -0.136666666666667 2.80471768906742 8.22473459459038 -0.061 -0.136666666666667 0.524237677706116 0.15049654872234 -0.680461267910899 -1.67357893396583 P29083 GTF2E1 P29083.S268.p_GTF2E1 P29083_S268s _1_1_268_268 P29083 P29083 General transcription factor IIE subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22833.22833.4 18.55 21.71 6.576 5 1 1 0 994.4888 3894.922 S268s TMT10 243 (K) GPSYEDLYTQNVVINMDDQEDLHRAsLEGK (S) GPS(0.0)Y(0.0)EDLY(0.0)T(0.0)QNVVINMDDQEDLHRAS(0.99)LEGK K:TMT10,s:Phosphorylated S GTF2E1 49793.6 2 2 3947.1 40.38 HUMAN 1 -2.8047 -8.2247 QEDSDKDSDEEEEKS-p P29374;S542-p QEDSDKDSDEEEEKS 0.233628206047255 0.00413940785491187 -0.551666666666667 0.667666666666667 12.1261189781305 35.0683932540952 -0.551666666666667 0.667666666666667 0.0612897856075228 0.000311286778219058 -2.35472472096493 8.11942565875709 P29374 ARID4A P29374.S542.p_ARID4A P29374_S538sS542s_2_2_538_542 P29374 P29374|P29374-2|P29374-3 AT-rich interactive domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9120.9120.5 10.65 10.65 99 2 2 2 0 672.3412 3197.7398 S538s S542s TMT10 532 (K) IKKQEDsDKDsDEEEEK (S) IKKQEDS(1.0)DKDS(1.0)DEEEEK K:TMT10,s:Phosphorylated S ARID4A 143719.1 6 14 532.1 280.77 HUMAN 1 -12.1261 35.0684 QEEADSVSQTLAKLN-p K7EKI0;S346-p QEEADSVSQTLAKLN 0.649743378726889 0.683034569719707 0.0613333333333333 -0.0403333333333333 3.51211137783652 2.2656251835185 0.0613333333333333 -0.0403333333333333 0.445439639604451 0.593522902149381 0.822639472294448 -0.566785802404285 K7EKI0 EVPL K7EKI0.S346.p_EVPL K7EKI0_S346s _1_1_346_346 K7EKI0 K7EKI0|Q92817 Envoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19358.19358.3 12.96 12.96 1.278 3 1 1 0 697.684 2011.0748 S346s TMT10 338 (R) FQEEADSVsQTLAK (L) FQEEADS(0.0)VS(0.99)QT(0.0)LAK K:TMT10,s:Phosphorylated S EVPL 235195.7 1 2 1436.1 142.57 HUMAN 1 3.5121 -2.2656 QEECPSDSEEDEGRG-p P09958;S775-p QEECPSDSEEDEGRG 0.228095422318106 0.05155187738701 0.224 0.283333333333333 12.3336317135908 17.1868494049616 0.224 0.283333333333333 0.0584301267813478 0.0191123926680782 2.39165520469005 3.29698059651734 P09958 FURIN P09958.S775.p_FURIN P09958_S773sS775s_2_2_773_775 P09958 P09958 Furin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17570.17570.3 12.04 12.04 99 2 2 2 0 1050.0846 2988.3115 S773s S775s TMT10 761 (K) GLPPEAWQEECPsDsEEDEGRGER (T) GLPPEAWQEECPS(1.0)DS(1.0)EEDEGRGER C:Carbamidomethylation,s:Phosphorylated S FURIN 87931.6 1 1 6368.1 12.04 HUMAN 1 12.3336 17.1868 QEEDDEKSDSEGGDL-p Q9NU22;S4752-p QEEDDEKSDSEGGDL 0.246495783528647 0.0113226331113857 -0.475666666666667 0.481333333333333 11.635543027702 27.2461971098945 -0.475666666666667 0.481333333333333 0.068619207382101 0.00188529922504699 -2.2678518617496 5.62824126446896 Q9NU22 MDN1 Q9NU22.S4752.p_MDN1 Q9NU22_S4752sS4754s_2_2_4752_4754 Q9NU22 Q9NU22 Midasin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13604.13604.5 24.81 18.8 99 2 2 2 0 737.5144 3523.6109 S4752s S4754s TMT10 4737 (K) MHDGELEEQEEDDEKsDsEGGDLDK (H) MHDGELEEQEEDDEKS(1.0)DS(1.0)EGGDLDK K:TMT10,s:Phosphorylated S MDN1 638399.7 4 10 905.1 202.58 HUMAN 1 -11.6355 27.2462 QEEDDSLSDAGTYTI-p J3KQR7;S566-p QEEDDSLSDAGTYTI 0.45060350179761 0.0991966709557079 0.120333333333333 0.243666666666667 6.39221253411845 13.261050334406 0.120333333333333 0.243666666666667 0.229497916206939 0.0471948887360561 1.35414496478106 2.55677831432019 J3KQR7 NotFound J3KQR7.S566.p_NotFound J3KQR7_S566s _1_1_566_566 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18628.18628.4 16.02 16.02 2.412 7 1 1 0 1039.499 4075.0082 S566s TMT10 558 (R) KQEEDDSLsDAGTYTIETEAQDTEVEEARK (M) KQEEDDS(0.0)LS(0.99)DAGT(0.0)Y(0.0)T(0.0)IET(0.0)EAQDT(0.0)EVEEARK K:TMT10,s:Phosphorylated S CEP170B 172326.6 4 10 51.1 746.11 HUMAN 1 6.3922 13.2611 QEEEAPVSPHKKPAP-p Q8N9T8;S639-p QEEEAPVSPHKKPAP 0.293942250620987 0.0100677391598653 -0.149 -0.448333333333333 10.0351085187098 28.0574575239084 -0.149 -0.448333333333334 0.0991948552757449 0.00156406301900941 -1.98781067829472 -5.85369595868992 Q8N9T8 KRI1 Q8N9T8.S639.p_KRI1 Q8N9T8_S639s _1_1_639_639 Q8N9T8 Q8N9T8 Protein KRI1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23708.23708.4 18.76 18.76 2.086 3 1 1 0 863.1779 3369.7401 S639s TMT10 615 (R) QLPALDGSLMGPESPPAQEEEAPVsPHK (K) QLPALDGS(0.0)LMGPES(0.0)PPAQEEEAPVS(0.99)PHK K:TMT10,s:Phosphorylated S KRI1 83053 2 6 863.1 210.23 HUMAN 1 -10.0351 -28.0575 QEEEDNHSDEEDRAS-p E7ERS3;S67-p QEEEDNHSDEEDRAS 0.296473227903219 0.669853566443963 -0.220333333333333 0.0866666666666667 9.94400626139416 2.37863319663987 -0.220333333333333 0.0866666666666667 0.101297650831102 0.578278013330292 -1.97198404248898 0.591037525730302 E7ERS3 ZC3H18 E7ERS3.S67.p_ZC3H18 E7ERS3_S67s _1_1_67_67 E7ERS3 E7ERS3|Q86VM9|Q86VM9-2 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4883.4883.4 19.86 19.86 5.633 3 1 1 0 731.5715 2843.2968 S67s TMT10 57 (R) GPSQEEEDNHsDEEDRASEPK (S) GPS(0.0)QEEEDNHS(0.99)DEEDRAS(0.0)EPK K:TMT10,s:Phosphorylated S ZC3H18 109165.8 5 3 157.1 499.97 HUMAN 1 -9.944 2.3786 QEEEDRDSPGPQVPD-p Q6NSJ2;S254-p QEEEDRDSPGPQVPD 0.481005429235313 0.398087394993758 -0.125 -0.181666666666667 5.85147981978263 5.31803655582615 -0.125 -0.181666666666667 0.259927373287084 0.293897806283627 -1.258060410774 -1.16178606056473 Q6NSJ2 PHLDB3 Q6NSJ2.S254.p_PHLDB3 Q6NSJ2_S254s _1_1_254_254 Q6NSJ2 Q6NSJ2|Q6NSJ2-2 Pleckstrin homology-like domain family B member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8165.8165.4 11.17 7.3 3.29 2 1 1 0 709.0909 2753.3742 S254s TMT10 244 (R) ESRQEEEDRDsPGPQVPDPK (V) ES(0.0)RQEEEDRDS(0.99)PGPQVPDPK K:TMT10,s:Phosphorylated S PHLDB3 72652.2 2 2 4275.1 34.4 HUMAN 1 -5.8515 -5.318 QEEEILGSDDDEQED-p Q96SB4-3;S222-p QEEEILGSDDDEQED 0.407878856431238 0.035676105191951 -0.167666666666667 -0.302 7.1865801472029 19.4860788831777 -0.167666666666667 -0.302 0.191135776519448 0.0112562080515116 -1.49363518550696 -3.76610601563747 Q96SB4 SRPK1 Q96SB4.3.S222.p_SRPK1 Q96SB4-3_S222s _1_1_222_222 Q96SB4-3 Q96SB4-3|Q96SB4-4 Isoform 1 of SRSF protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17837.18248.4 31.01 31.01 7.583 5 1 1 0 1068.9559 4192.8301 S222s TMT10 203 (R) GSAPHSESDLPEQEEEILGsDDDEQEDPNDYCK (G) GS(0.0)APHS(0.0)ES(0.0)DLPEQEEEILGS(0.99)DDDEQEDPNDY(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SRPK1 93208.6 3 1 1661.1 122.72 HUMAN 1 -7.1866 -19.4861 QEEEKHSSEEEDEKE-p R4GMW8;S611-p QEEEKHSSEEEDEKE 0.205489455095731 0.00479654424040192 -0.358 0.695666666666667 13.2866541461536 33.8932635146083 -0.358 0.695666666666667 0.0469174700445355 0.000408012669165655 -2.56285106315847 7.69553806536863 R4GMW8 NotFound R4GMW8.S611.p_NotFound R4GMW8_S610sS611s_2_2_610_611 R4GMW8 R4GMW8|A0A1W2PS85|P28715|P28715-3 BIVM-ERCC5 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20347.20347.5 18.81 12.01 18.267 3 2 2 0 778.7759 3729.9062 S610s S611s TMT10 593 (R) RENDLYVLPPLQEEEKHssEEEDEK (E) RENDLY(0.0)VLPPLQEEEKHS(0.99)S(0.99)EEEDEK K:TMT10,s:Phosphorylated S BIVM-ERCC5 185876.1 9 14 561.1 271.77 HUMAN 1 -13.2867 33.8933 QEEFKGFSYFGEDLM-p Q02156;S729-p QEEFKGFSYFGEDLM 0.375214461063752 0.463491656253237 0.192666666666667 0.0756666666666667 7.8805951485339 4.45320950383001 0.192666666666667 0.0756666666666667 0.162907277244474 0.358656783735182 1.61444002428977 1.00264445519353 Q02156 PRKCE Q02156.S729.p_PRKCE Q02156_S729s _1_1_729_729 Q02156 Q02156 Protein kinase C epsilon type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.35095.35095.3 18.98 18.98 5.939 2 1 1 0 939.7801 2737.3584 S729s TMT10 719 (K) QINQEEFKGFsYFGEDLMP (-) Q(0.0)IN(0.0)QEEFKGFS(0.99)Y(0.0)FGEDLM(0.0)P K:TMT10,s:Phosphorylated S PRKCE 85041.6 15 7 1089.1 179.15 HUMAN 1 7.8806 4.4532 QEEGADASEEDPTPA-p Q86X53;S254-p QEEGADASEEDPTPA 0.679055529340642 0.0548699881442799 0.119 0.389666666666667 3.1462995288653 16.8040712211497 0.119 0.389666666666667 0.484585089704655 0.0208733847279064 0.749973916146349 3.22172428678607 Q86X53 ERICH1 Q86X53.S254.p_ERICH1 Q86X53_S254s_1_1_254_254 Q86X53 Q86X53|E5RHA3 Glutamate-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.10576.10576.3 20.97 19.09 5.786 2 1 1 0 946.4009 2774.2438 Q247q S254s Hydrogen 247 (R) qEEGADAsEEDPTPAGEEDVKDAR (E) Q(1.0)EEGADAS(0.99)EEDPT(0.0)PAGEEDVKDAR K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S ERICH1 49211.7 7 1 2881.1 67.3 HUMAN 1 3.1463 16.8041 QEEKALLSSPEGEEK-p O75592;S3893-p QEEKALLSSPEGEEK 0.114688242267433 0.220025441196734 -0.325333333333333 -0.122 19.5914620730456 8.65651796118909 -0.325333333333333 -0.122 0.0109863591615715 0.136253668440551 -3.79181710822136 -1.74830231685345 O75592 MYCBP2 O75592.S3893.p_MYCBP2 O75592_S3893sS3894s_2_2_3893_3894 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18724.18724.3 10.05 10.05 99 2 2 2 0 593.2866 1617.91 S3893s S3894s TMT10 3890 (K) ALLssPEGEEK (V) ALLS(1.0)S(1.0)PEGEEK K:TMT10,s:Phosphorylated S MYCBP2 518176.7 2 31 252.1 405.77 HUMAN 1 -19.5915 -8.6565 QEELAKLSEKLKKKQ-p Q4V328;S232-p QEELAKLSEKLKKKQ 0.250538100050819 0.125314238130395 -0.189 0.241 11.4718755549461 11.8934861933186 -0.189 0.241 0.0712545242110613 0.0646623346197832 -2.2389946713906 2.3123144457986 Q4V328 GRIPAP1 Q4V328.S232.p_GRIPAP1 Q4V328_S232s _1_1_232_232 Q4V328 Q4V328|Q4V328-4|A0A075B793|A0A087WT45|Q4V328-2|Q4V328-3 GRIP1-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21108.21108.3 12.93 12.93 99 1 1 1 0 685.7283 1975.2043 S232s TMT10 224 (R) LQEELAKLsEK (L) LQEELAKLS(1.0)EK K:TMT10,s:Phosphorylated S GRIPAP1 96330.2 1 1 1542.1 132.91 HUMAN 1 -11.4719 11.8935 QEELDKLSPHKIKHT-p Q2KHM9;S287-p QEELDKLSPHKIKHT 0.844692536304192 0.00184260569775099 -0.041 -0.858333333333333 1.4159655135702 43.0172229908255 -0.041 -0.858333333333334 0.721777681133763 4.99203591175619e-05 -0.37519334271888 -11.5754007833679 Q2KHM9 KIAA0753 Q2KHM9.S287.p_KIAA0753 Q2KHM9_S287s _1_1_287_287 Q2KHM9 Q2KHM9 Protein moonraker HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17609.17609.4 18.63 18.63 99 1 1 1 0 584.0739 2253.3058 S287s TMT10 278 (K) EIQEELDKLsPHK (I) EIQEELDKLS(1.0)PHK K:TMT10,s:Phosphorylated S KIAA0753 110317.7 2 2 2251.1 91.27 HUMAN 1 -1.416 -43.0172 QEEMKKLSLLNGGLQ-p O95235;S226-p QEEMKKLSLLNGGLQ 0.336172963233061 0.164515898981585 -0.169666666666667 0.161666666666667 8.82781335438004 10.3060588202316 -0.169666666666667 0.161666666666667 0.130984125389998 0.0931953230237354 -1.77855702865778 2.03408601658847 O95235 KIF20A O95235.S226.p_KIF20A O95235_S226s _1_1_226_226 O95235 O95235|O95235-2 Kinesin-like protein KIF20A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27599.27599.4 15.91 15.91 12.128 4 1 1 0 707.4012 2746.6169 S226s TMT10 224 (K) KLsLLNGGLQEEELSTSLK (R) KLS(0.99)LLNGGLQEEELS(0.0)T(0.0)S(0.0)LK K:TMT10,s:Phosphorylated S KIF20A 101303.1 2 5 845.1 213.8 HUMAN 1 -8.8278 10.3061 QEENLEASGDYKYSG-p P12956;S27-p QEENLEASGDYKYSG 0.289754903438724 0.0200510267309114 -0.25 0.502333333333333 10.1431408010899 23.2739639678533 -0.25 0.502333333333333 0.0967577854567142 0.00470547643933573 -2.00659024824821 4.61424487079381 P12956 XRCC6 P12956.S27.p_XRCC6 P12956_S27s _1_1_27_27 P12956 P12956|P12956-2 X-ray repair cross-complementing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13314.13314.3 20.33 20.33 7.311 3 1 1 0 1013.7678 2959.3217 S27s TMT10 10 (K) TEGDEEAEEEQEENLEAsGDYK (Y) T(0.0)EGDEEAEEEQEENLEAS(0.99)GDY(0.0)K K:TMT10,s:Phosphorylated S XRCC6 70127.1 6 4 815.1 220.5 HUMAN 1 -10.1431 23.274 QEENRRLSREQERLE-p Q6DT37;S646-p QEENRRLSREQERLE 0.278653304461677 0.0125988700247671 -0.307666666666667 -0.501 10.4953937561947 26.4946798275891 -0.307666666666667 -0.501 0.0892196724267252 0.00224146528594112 -2.06792431336191 -5.42526397771385 Q6DT37 CDC42BPG Q6DT37.S646.p_CDC42BPG Q6DT37_S646s _1_1_646_646 Q6DT37 Q6DT37 Serine/threonine-protein kinase MRCK gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15603.15603.5 15.04 10.63 15.038 2 1 1 0 594.3121 2887.5638 S646s TMT10 644 (R) RLsREQERLEAELAQEQESK (Q) RLS(0.99)REQERLEAELAQEQES(0.0)K K:TMT10,s:Phosphorylated S CDC42BPG 173882.5 3 2 997.1 190.4 HUMAN 1 -10.4954 -26.4947 QEEQDGGSSDEDRAG-p Q14147;S749-p QEEQDGGSSDEDRAG 0.902738973298693 0.722920944129696 0.02 0.0343333333333333 0.873494881831146 1.93944952303732 0.02 0.0343333333333333 0.817806412951454 0.639815928294835 0.241837818866241 0.495293681834562 Q14147 DHX34 Q14147.S749.p_DHX34 Q14147_S749sS750s_2_2_749_750 Q14147 Q14147 Probable ATP-dependent RNA helicase DHX34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20525.20525.5 16.44 12.93 6.424 3 2 2 0 772.349 3697.7829 S749s S750s TMT10 741 (R) LQEEQDGGssDEDRAGPAPPGASDGVDIQDVK (F) LQEEQDGGS(0.99)S(0.99)DEDRAGPAPPGAS(0.0)DGVDIQDVK K:TMT10,s:Phosphorylated S DHX34 129258.4 2 1 4717.1 27.53 HUMAN 1 0.8735 1.9394 QEEQGEGSEDEWEQV-p Q14694;S576-p QEEQGEGSEDEWEQV 0.701569772748688 0.493030160451838 0.052 0.0696666666666667 2.8952728262666 4.1050516590249 0.052 0.0696666666666667 0.513419923157922 0.388592875641823 0.699059558102428 0.936996014875771 Q14694 USP10 Q14694.S576.p_USP10 Q14694_S576s _1_1_576_576 Q14694 Q14694-2|Q14694-3 Ubiquitin carboxyl-terminal hydrolase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11535.12191.3 32.69 32.69 23.745 2 1 1 0 1112.7982 3256.41 S576s TMT10 561 (K) NHSVNEEEQEEQGEGsEDEWEQVGPR (N) NHS(0.0)VNEEEQEEQGEGS(0.99)EDEWEQVGPR s:Phosphorylated S USP10 87759.8 12 14 358.1 346.34 HUMAN 1 2.8953 4.1051 QEERRRRSFQDYTGQ-p A0A087WXF8;S136-p QEERRRRSFQDYTGQ 0.498868510893363 0.110297147501293 0.0916666666666667 0.231 5.56351597774383 12.6415997052111 0.0916666666666667 0.231 0.277746376764796 0.0544302124545482 1.20639666494875 2.44538350921759 A0A087WXF8 ZCCHC17 A0A087WXF8.S136.p_ZCCHC17 A0A087WXF8_S136s _1_1_136_136 A0A087WXF8 A0A087WXF8|A0A0D9SEW3|Q9NP64|Q9NP64-3|Q9NP64-2|A0A087WYV3|A0A087WXU5 Nucleolar protein of 40 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10118.10118.2 10.53 10.53 5.271 3 1 1 0 691.8131 1302.6527 S136s Hydrogen 136 (R) sFQDYTGQK (I) S(0.99)FQDY(0.0)T(0.0)GQK K:TMT10-Lys-Only,s:Phosphorylated S ZCCHC17 30030.8 4 1 5377.1 19.86 HUMAN 1 5.5635 12.6416 QEESLEDSDVDADFK-p O00505;S60-p QEESLEDSDVDADFK 0.517450239117038 0.441829906813654 -0.0986666666666667 0.077 5.28429156201593 4.72262861918759 -0.0986666666666667 0.077 0.296190308309503 0.337083223258352 -1.15591016817632 1.05277124041577 O00505 KPNA3 O00505.S60.p_KPNA3 O00505_S60s _1_1_60_60 O00505 O00505 Importin subunit alpha-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37109.37109.5 34.41 34.41 4.714 6 1 1 0 1116.3649 5497.7975 S60s TMT10 50 (R) NVPQEESLEDsDVDADFKAQNVTLEAILQNATSDNPVVQLSAVQAAR (K) NVPQEES(0.0)LEDS(0.99)DVDADFKAQNVT(0.0)LEAILQNAT(0.0)S(0.0)DNPVVQLS(0.0)AVQAAR K:TMT10,s:Phosphorylated S KPNA3 58323.3 16 1 2592.1 77.29 HUMAN 1 -5.2843 4.7226 QEESLMPSQVVKGGA-p Q9H4M9;S406-p QEESLMPSQVVKGGA 0.212264138240011 0.135644418326948 0.187333333333333 0.194333333333333 12.9887735470096 11.4333482056529 0.187333333333333 0.194333333333333 0.0502484471724128 0.0718894530522986 2.50904417266295 2.23115825604 Q9H4M9 EHD1 Q9H4M9.S406.p_EHD1 Q9H4M9_S406s _1_1_406_406 Q9H4M9 A0A024R571|Q9H4M9 EH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19641.19641.3 9.96 9.96 9.962 2 1 1 0 638.3342 1833.0192 S406s TMT10 399 (R) QEESLMPsQVVK (G) QEES(0.0)LMPS(0.99)QVVK K:TMT10,s:Phosphorylated S EHD1 60682.8 1 7 1572.1 130.65 HUMAN 1 12.9888 11.4333 QEEVPPDSDDNKTKK-p Q27J81;S1237-p QEEVPPDSDDNKTKK 0.553463060088551 0.0743238715153681 0.0796666666666666 -0.210333333333333 4.74241723587882 14.9829073016268 0.0796666666666667 -0.210333333333333 0.335550798330983 0.0317474808453843 1.05663607686333 -2.87337366133018 Q27J81 INF2 Q27J81.S1237.p_INF2 Q27J81_S1237s _1_1_1237_1237 Q27J81 Q27J81 Inverted formin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8161.8184.3 11.07 11.07 6.319 2 1 1 0 666.6441 1917.9442 S1237s TMT10 1229 (R) SQEEVPPDsDDNK (T) S(0.0)QEEVPPDS(0.99)DDNK K:TMT10,s:Phosphorylated S INF2 136934.1 2 11 356.1 347.64 HUMAN 1 4.7424 -14.9829 QEFGKRDSLGTYSSR-p Q9C0C2;S872-p QEFGKRDSLGTYSSR 0.173734073363689 0.0351241718099001 -0.247666666666667 -0.359 15.1384644909574 19.580463479268 -0.247666666666667 -0.359 0.0306304622520785 0.0110142175948894 -2.90446087315101 -3.78603791996318 Q9C0C2 TNKS1BP1 Q9C0C2.S872.p_TNKS1BP1 Q9C0C2_S872s _1_1_872_872 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12536.12536.3 14.25 14.25 2.516 5 1 1 0 904.4204 2631.2848 S872s Hydrogen 859 (R) DAELQDQEFGKRDsLGTYSSR (D) DAELQDQEFGKRDS(0.99)LGT(0.0)Y(0.0)S(0.0)S(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S TNKS1BP1 182819.3 14 31 4.1 2105.7 HUMAN 1 -15.1385 -19.5805 QEFLGGLSPGVLDRL-p Q92759;S27-p QEFLGGLSPGVLDRL 0.732092052632994 0.246712314884076 0.0596666666666667 0.192333333333333 2.56818003673368 8.0091135920463 0.0596666666666667 0.192333333333333 0.553582045829596 0.158157080963598 0.631252100010295 1.63622230429454 Q92759 GTF2H4 Q92759.S27.p_GTF2H4 Q92759_S27s _1_1_27_27 Q92759 Q92759 General transcription factor IIH subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33936.33936.3 18.85 18.85 99 1 1 1 0 675.3541 1944.0752 S27s TMT10 18 (R) NLQEFLGGLsPGVLDR (L) NLQEFLGGLS(1.0)PGVLDR s:Phosphorylated S GTF2H4 52356.5 1 1 5488.1 18.85 HUMAN 1 2.5682 8.0091 QEFSRRLSMSEVKDD-p Q8TDM6;S1666-p QEFSRRLSMSEVKDD 0.161635164088614 0.673544416126513 -0.236 0.0643333333333334 15.8436946651644 2.34765715419692 -0.236 0.0643333333333334 0.0260393736477812 0.582417323995035 -3.03823521855191 0.584414912146764 Q8TDM6 DLG5 Q8TDM6.S1666.p_DLG5 Q8TDM6_S1666s _1_1_1666_1666 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2|Q8TDM6-5 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12960.12960.4 14.65 14.65 1.921 4 1 1 0 612.8236 2368.3109 S1666s TMT10 1664 (R) RLsMSEVKDDNSATK (T) RLS(0.99)MS(0.0)EVKDDNS(0.0)AT(0.0)K K:TMT10,s:Phosphorylated S DLG5 215575.4 11 39 34.1 890.58 HUMAN 1 -15.8437 2.3477 QEFVPPATPPARHQW-p Q68DK2;T1802-p QEFVPPATPPARHQW 0.771638354290043 0.951627785467761 0.0456666666666667 0.00666666666666667 2.15633552534844 0.306900020726657 0.0456666666666667 0.00666666666666667 0.608648347828178 0.931772734368259 0.543151907824792 0.0896646904187341 Q68DK2 ZFYVE26 Q68DK2.T1802.p_ZFYVE26 Q68DK2_T1802t _1_1_1802_1802 Q68DK2 Q68DK2|Q68DK2-2|Q68DK2-5|G3V2D8 Zinc finger FYVE domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20969.21223.3 12.07 12.07 5.217 4 1 1 0 820.7432 2380.2499 T1802t TMT10 1787 (R) SFPPTQPSQEFVPPAtPPAR (H) S(0.0)FPPT(0.0)QPS(0.0)QEFVPPAT(0.99)PPAR t:Phosphorylated T ZFYVE26 289306.4 1 10 898.1 203.99 HUMAN 1 2.1563 0.3069 QEGKAAATPESQEPQ-p P49006;T148-p QEGKAAATPESQEPQ 0.791063298485563 0.0819548422405902 0.0383333333333333 -0.206333333333333 1.9648165069444 14.4005621290693 0.0383333333333333 -0.206333333333333 0.636089679591171 0.0363031062802797 0.500996229151385 -2.76504722644686 P49006 MARCKSL1 P49006.T148.p_MARCKSL1 P49006_T148t _1_1_148_148 P49006 P49006 MARCKS-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7480.7480.3 11.83 11.83 1.183 2 1 1 0 622.6525 1785.9747 T148t TMT10 145 (K) AAAtPESQEPQAK (G) AAAT(0.99)PES(0.0)QEPQAK K:TMT10,t:Phosphorylated T MARCKSL1 19585.5 2 10 402.1 327.42 HUMAN 1 1.9648 -14.4006 QEGPVRLSPGRLQGH-p P50747;S299-p QEGPVRLSPGRLQGH 0.147946322560902 0.0128686511008283 -0.258 -0.388666666666667 16.8366263056712 26.3302991688116 -0.258 -0.388666666666667 0.020717501045531 0.00232793088991109 -3.23052582577118 -5.38159723799455 P50747 HLCS P50747.S299.p_HLCS P50747_S299s _1_1_299_299 P50747 P50747 Biotin--protein ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13410.13410.5 14.61 9.14 11.987 2 1 1 0 667.145 3251.7285 S299s TMT10 291 (R) YQEGPVRLsPGRLQGHLENEDKDR (M) Y(0.0)QEGPVRLS(0.99)PGRLQGHLENEDKDR K:TMT10,s:Phosphorylated S HLCS 81386.1 1 3 2840.1 68.41 HUMAN 1 -16.8366 -26.3303 QEGWEYASLIGWKFH-p Q9NZM1;S1055-p QEGWEYASLIGWKFH 0.978785641241596 0.329075657238065 -0.00800000000000002 0.108666666666667 0.184065765679726 6.39114103743164 -0.00800000000000002 0.108666666666667 0.95850288286367 0.229554545200568 -0.0544862590995179 1.35361366611318 Q9NZM1 MYOF Q9NZM1.S1055.p_MYOF Q9NZM1_S1055s _1_1_1055_1055 Q9NZM1 Q9NZM1|Q9NZM1-3|Q9NZM1-6|Q9NZM1-2|Q9NZM1-5 Myoferlin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.33571.33571.3 12.13 12.13 1.231 2 1 1 0 974.4733 2841.417 S1055s TMT10 1041 (R) AMEELQDQEGWEYAsLIGWK (F) AMEELQDQEGWEY(0.0)AS(0.99)LIGWK K:TMT10,s:Phosphorylated S MYOF 236244.8 1 10 829.1 216.58 HUMAN 1 -0.1841 6.3911 QEHNDRRSLGHPEPL-p P49768;S43-p QEHNDRRSLGHPEPL 0.90916953958039 0.896306317779158 0.0183333333333333 -0.0203333333333333 0.812721756788124 0.667213783371895 0.0183333333333333 -0.0203333333333334 0.829330856614265 0.857587854345192 0.226218601443328 -0.18816685715619 P49768 PSEN1 P49768.S43.p_PSEN1 P49768_S43s_1_1_43_43 P49768 P49768|P49768-2|P49768-7|P49768-6|P49768-5|P49768-3|P49768-4 Presenilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5613.5613.3 21.43 18.16 6.29 3 1 1 0 661.9725 1902.9529 S43s N52n Hydrogen 43 (R) sLGHPEPLSnGRPQGNSR (Q) S(0.99)LGHPEPLS(0.0)N(0.99)GRPQGN(0.0)S(0.0)R s:Phosphorylated S,n:Deamidated PSEN1 52952.1 7 1 2595.1 77.27 HUMAN 1 0.8127 -0.6672 QEIDRYASENVNKLL-p Q9H0U4;S111-p QEIDRYASENVNKLL 0.578613536848391 0.102216430203127 -0.103666666666667 0.179333333333333 4.37043733406772 13.0848262458536 -0.103666666666667 0.179333333333333 0.365557978111232 0.0491493043641819 -0.987309218472942 2.52496727866363 Q9H0U4 RAB1B Q9H0U4.S111.p_RAB1B Q9H0U4_S111s _1_1_111_111 Q9H0U4 P62820|Q9H0U4|E7END7|E9PLD0|P62820-2 Ras-related protein Rab-1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25219.25219.3 17.19 17.19 17.193 2 1 1 0 844.4275 2451.3032 S111s TMT10 101 (K) QWLQEIDRYAsENVNK (L) QWLQEIDRY(0.0)AS(0.99)ENVNK K:TMT10,s:Phosphorylated S RAB1B 22341.9 3 22 2008.2 102.72 HUMAN 1 -4.3704 13.0848 QEISRPNSPSEGEGE-p Q9P2R6;S679-p QEISRPNSPSEGEGE 0.378045476353578 0.526739898826826 -0.134 -0.101333333333333 7.80693785424947 3.74122563794627 -0.134 -0.0947747538630175 0.165693783390157 0.422549348278576 -1.60165064702184 -0.867189733206229 Q9P2R6 RERE Q9P2R6.S679.p_RERE Q9P2R6_S679sS681s_2_2_679_681 Q9P2R6 Q9P2R6|B1AKN3|Q9P2R6-2 Arginine-glutamic acid dipeptide repeats protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6913.6913.3 10.82 10.82 3.271 7 2 2 0 880.0342 2478.1542 S679s S681s TMT10 671 (K) TQEISRPNsPsEGEGESSDSR (S) T(0.0)QEIS(0.0)RPNS(0.99)PS(0.99)EGEGES(0.0)S(0.0)DS(0.0)R s:Phosphorylated S RERE 173561.6 1 14 278.1 389.04 HUMAN 1 -7.8069 -3.7412 QEKDSLITPHVSRSS-p P49792;T2450-p QEKDSLITPHVSRSS 0.830680447880338 0.772165637349213 -0.03 -0.0306666666666667 1.55036304921501 1.55386294340549 -0.03 -0.0306666666666667 0.699783495036142 0.699219780393754 -0.406752136188633 -0.407523284328376 P49792 RANBP2 P49792.T2450.p_RANBP2 P49792_T2450t _1_1_2450_2450 P49792 P49792|Q99666|O14715|J3KNE0 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10916.10916.3 17.65 17.65 5.608 3 1 1 0 478.5831 1353.7688 T2450t TMT10 2446 (K) DSLItPHVSR (S) DS(0.0)LIT(0.99)PHVS(0.0)R t:Phosphorylated T RANBP2 362585.9 4 50 9.1 1298.62 HUMAN 1 -1.5504 -1.5539 QEKEAEFSDPENTRT-p Q5T481;S876-p QEKEAEFSDPENTRT 0.340998799441524 0.0105302419768036 -0.335666666666667 0.615333333333333 8.68675918918143 27.7430554716644 -0.335666666666667 0.615333333333333 0.135308188909794 0.0016814906348577 -1.75414027290214 5.76552334370169 Q5T481 RBM20 Q5T481.S876.p_RBM20 Q5T481_S876s _1_1_876_876 Q5T481 Q5T481 RNA-binding protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9645.9645.3 11.08 8.19 11.078 2 1 1 0 535.2333 1523.7175 S876s TMT10 872 (K) EAEFsDPENTR (T) EAEFS(0.99)DPENT(0.0)R s:Phosphorylated S RBM20 135496 2 6 522.1 283.33 HUMAN 1 -8.6868 27.7431 QEKEASASPDPAKKS-p Q9NUA8;S728-p QEKEASASPDPAKKS 0.894508174750619 0.0104377289471877 0.0203333333333333 0.402 0.946714328536037 27.8073557329836 0.0203333333333333 0.402 0.804134262954077 0.00165677841079049 0.260458345909601 5.78347310087806 Q9NUA8 ZBTB40 Q9NUA8.S728.p_ZBTB40 Q9NUA8_S728s _1_1_728_728 Q9NUA8 Q9NUA8|F8WAI8 Zinc finger and BTB domain-containing protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6997.6997.2 15.22 12.57 2.195 2 1 1 0 934.51 1788.047 S728s TMT10 724 (K) EASAsPDPAKK (S) EAS(0.0)AS(0.99)PDPAKK K:TMT10,s:Phosphorylated S ZBTB40 140797.4 6 6 1500.1 135.98 HUMAN 1 0.9467 27.8074 QEKELDLSELDDPDS-p Q9UER7;S213-p QEKELDLSELDDPDS 0.400028642815168 0.0145535069518938 0.182333333333333 0.397666666666667 7.34276670856219 25.4416913772346 0.182333333333333 0.397666666666667 0.184384041131142 0.00285647785998901 1.52088930634992 5.14994421023083 Q9UER7 DAXX Q9UER7.S213.p_DAXX Q9UER7_S213s _1_1_213_213 Q9UER7 Q9UER7|Q9UER7-2 Death domain-associated protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28683.28683.3 8.71 8.71 8.709 3 1 1 0 830.0535 2408.1666 S213s TMT10 209 (K) ELDLsELDDPDSAYLQEAR (L) ELDLS(0.99)ELDDPDS(0.0)AY(0.0)LQEAR s:Phosphorylated S DAXX 82112.9 1 4 315.1 368.97 HUMAN 1 7.3428 25.4417 QEKIEPGSLNEEPFM-p Q96S38;S528-p QEKIEPGSLNEEPFM 0.134264480831341 0.102880666308245 -0.456333333333333 0.318333333333333 17.9040008440049 13.0454338025836 -0.456333333333333 0.318333333333333 0.0162031672784874 0.0495971383958843 -3.44286293773191 2.51786984830774 Q96S38 RPS6KC1 Q96S38.S528.p_RPS6KC1 Q96S38_S528s _1_1_528_528 Q96S38 Q96S38|Q96S38-2|F6RJM5|F5H7T0|A0A087X1U5 Ribosomal protein S6 kinase delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24939.24939.3 12.01 12.01 99 1 1 1 0 677.0085 1949.0454 S528s TMT10 524 (K) IEPGsLNEEPFMK (T) IEPGS(1.0)LNEEPFMK K:TMT10,s:Phosphorylated S RPS6KC1 119593.1 3 10 253.1 405.38 HUMAN 1 -17.904 13.0454 QEKKRPQSPSPRRET-p Q99590;S816-p QEKKRPQSPSPRRET 0.272149415958816 0.0984337701377422 0.183666666666667 0.306666666666667 10.7080544886486 13.3102972610468 0.183666666666667 0.306666666666667 0.0849560968093808 0.0466627440026227 2.10503804535117 2.56568601643814 Q99590 SCAF11 Q99590.S816.p_SCAF11 Q99590_S816s _1_1_816_816 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3474.3474.3 7.8 7.8 7.796 2 1 1 0 530.9692 1510.9218 S816s TMT10 812 (K) KRPQsPSPR (R) KRPQS(0.99)PS(0.0)PR K:TMT10,s:Phosphorylated S SCAF11 166418 10 18 120.1 549.85 HUMAN 1 10.7081 13.3103 QEKNPLPSKETIEQE-p P62328;S31-p QEKNPLPSKETIEQE 0.547270349494435 0.93010231287797 -0.108666666666667 0.0116666666666667 4.8329156945313 0.444019403338931 -0.108666666666667 0.0116666666666667 0.328630925996762 0.902813531381488 -1.0733481851516 0.127932487054319 P62328 TMSB4X P62328.S31.p_TMSB4X P62328_S31s _1_1_31_31 P62328 P62328 Thymosin beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16232.16232.3 11.72 11.72 1.161 2 1 1 0 760.7543 2200.2792 S31s TMT10 27 (K) NPLPsKETIEQEK (Q) NPLPS(0.99)KET(0.0)IEQEK K:TMT10,s:Phosphorylated S TMSB4X 5052.6 2 4 2087.1 98.1 HUMAN 1 -4.8329 0.444 QEKNPRESTGNMVTG-p Q15021;S585-p QEKNPRESTGNMVTG 0.827997063487557 0.440897459608939 0.0526666666666667 0.117333333333333 1.57495756749334 4.73708033162548 0.0526666666666667 0.117333333333333 0.695831753253774 0.335963399305193 0.412471058549979 1.05544483536691 Q15021 NCAPD2 Q15021.S585.p_NCAPD2 Q15021_S585sT586tT591t_3_3_585_591 Q15021 Q15021 Condensin complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7137.7137.4 8.55 1.68 1.246 6 3 3 0 1048.9713 3950.9726 S585s T586t T591t N598n N601n TMT10 581 (K) NPREstGNMVtGQTVCKnKPnMSDPEESR (G) N(0.0)PRES(0.99)T(0.99)GN(0.0)MVT(0.99)GQT(0.0)VCKN(0.99)KPN(0.99)MS(0.0)DPEES(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated NCAPD2 158605.7 1 11 1192.1 168.06 HUMAN 1 1.575 4.7371 QEKQAGES_______-p P62328;S44-p QEKQAGES_______ 0.134264480831341 0.0566858491284391 1.64066666666667 -0.781 17.9111418482386 16.6116626141275 1.64066666666667 -0.781 0.0161765466751908 0.0218189445498745 3.44430441833054 -3.18417757760437 P62328 TMSB4X P62328.S44.p_TMSB4X P62328_S44s _1_1_44_44 P62328 P62328 Thymosin beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16399.16399.3 7.07 7.07 7.074 3 1 1 0 918.1492 2672.471 S44s TMT10 27 (K) NPLPSKETIEQEKQAGEs (-) NPLPS(0.0)KET(0.0)IEQEKQAGES(0.99) K:TMT10,s:Phosphorylated S TMSB4X 5052.6 1 6 2087.1 98.1 HUMAN 1 17.9111 -16.6117 QEKSTNTSQTGLVGT-p Q96R06;S401-p QEKSTNTSQTGLVGT 0.968736469230095 0.00863581948483907 -0.00600000000000001 -0.468333333333333 0.270657714158911 29.2776458264862 -0.00600000000000001 -0.468333333333333 0.939581005618708 0.00118096062371223 -0.0793830952873596 -6.2057949759776 Q96R06 SPAG5 Q96R06.S401.p_SPAG5 Q96R06_S401s _1_1_401_401 Q96R06 Q96R06 Sperm-associated antigen 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11595.11595.2 12.57 12.57 1.38 6 1 1 0 916.4829 1751.9903 S401s TMT10 397 (K) STNTsQTGLVGTK (H) S(0.0)T(0.0)NT(0.0)S(0.99)QT(0.0)GLVGT(0.0)K K:TMT10,s:Phosphorylated S SPAG5 135788.8 2 13 612.1 261.64 HUMAN 1 -0.2707 -29.2776 QEKVENKTPLVNESL-p O95684;T55-p QEKVENKTPLVNESL 0.283800433388815 0.00389142811872595 -0.273 0.710333333333333 10.3206053482064 35.5686932174659 -0.273 0.710333333333333 0.0928836910360278 0.000277415471612533 -2.03746978241007 8.30594330649817 O95684 FGFR1OP O95684.T55.p_FGFR1OP O95684_T55t _1_1_55_55 O95684 O95684 FGFR1 oncogene partner HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16751.16751.3 13.34 9.28 4.827 2 1 1 0 746.7608 2158.305 T55t TMT10 51 (K) VENKtPLVNESLK (K) VENKT(0.99)PLVNES(0.0)LK K:TMT10,t:Phosphorylated T FGFR1OP 43178.2 2 1 1485.1 137.99 HUMAN 1 -10.3206 35.5687 QEKVSAQYLSEIEMA-p O75955;Y203-p QEKVSAQYLSEIEMA 0.278485430498237 0.0359015864184068 0.152666666666667 0.271 10.5020610374837 19.4475132528719 0.152666666666667 0.271 0.0890828076258712 0.0113566090293525 2.06908685324075 3.75797800277536 O75955 FLOT1 O75955.Y203.p_FLOT1 O75955_Y203y _1_1_203_203 O75955 O75955|O75955-2 Flotillin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25070.25070.3 19.32 16.65 7.04 3 1 1 0 669.6814 1927.0611 Y203y TMT10 199 (K) VSAQyLSEIEMAK (A) VS(0.0)AQY(0.99)LS(0.0)EIEMAK K:TMT10,y:Phosphorylated Y FLOT1 47582.7 1 2 2431.1 83.61 HUMAN 1 10.5021 19.4475 QELAVFCSPEPPAKT-p Q9Y490;S2162-p QELAVFCSPEPPAKT 0.889828357686133 0.852303921763796 0.0223333333333333 0.0303333333333334 0.989846183663539 0.976306827991329 0.0223333333333333 0.0303333333333333 0.796187548906663 0.798673578024695 0.271329506632928 0.267898336881716 Q9Y490 TLN1 Q9Y490.S2162.p_TLN1 Q9Y490_S2162s _1_1_2162_2162 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21571.21571.3 13.85 11.03 99 1 1 1 0 704.3608 2031.0985 S2162s TMT10 2155 (R) QELAVFCsPEPPAK (T) QELAVFCS(1.0)PEPPAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TLN1 271930.4 1 26 267.1 395.2 HUMAN 1 0.9898 0.9763 QELEMFGSQPAYPEK-p Q5VTI5;S597-p QELEMFGSQPAYPEK 0.415595433106286 0.0374522369627673 0.125 0.288333333333333 7.03655163184222 19.1666926717879 0.125 0.288333333333333 0.197854000922479 0.0121152040414329 1.46740987758626 3.69907306704983 Q5VTI5 NotFound Q5VTI5.S597.p_NotFound Q5VTI5_S597s _1_1_597_597 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28902.28902.4 19.97 16.99 5.072 5 1 1 0 862.6588 3367.6591 S597s TMT10 579 (K) ESLESALMGTHQELEMFGsQPAYPEK (L) ES(0.0)LES(0.0)ALMGT(0.0)HQELEMFGS(0.99)QPAY(0.0)PEK K:TMT10,s:Phosphorylated S PLEKHA6 119745.7 1 20 52.1 743.36 HUMAN 1 7.0366 19.1667 QELLERHSKGPLIVD-p Q5JTZ9;S879-p QELLERHSKGPLIVD 0.186865869997211 0.0200512850704527 -0.577333333333333 0.609666666666667 14.3238349617979 23.2693296760971 -0.577333333333333 0.609666666666667 0.0369501753589691 0.00471050026313339 -2.75257142575355 4.61314183496294 Q5JTZ9 AARS2 Q5JTZ9.S879.p_AARS2 Q5JTZ9_S879s _1_1_879_879 Q5JTZ9 Q5JTZ9 Alanine--tRNA ligase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8310.8310.4 9.51 9.51 9.511 2 1 1 0 534.8108 2056.2482 S879s TMT10 870 (K) KTQELLERHsK (G) KT(0.0)QELLERHS(0.99)K K:TMT10,s:Phosphorylated S AARS2 108365.4 1 2 5571.1 18.09 HUMAN 1 -14.3238 23.2693 QELPRLLSAACRLQL-p P49327;S1183-p QELPRLLSAACRLQL 0.10963927078059 0.00326950192050815 -0.358333333333333 -0.702666666666667 20.1000431047791 37.2413766384743 -0.358333333333333 -0.702666666666667 0.00977227521687852 0.000188739298329842 -3.90045366265906 -8.95716533985636 P49327 FASN P49327.S1183.p_FASN P49327_S1183s _1_1_1183_1183 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14394.14394.2 9.39 2.39 99 1 1 1 0 550.2804 1019.5869 S1183s TMT10 1181 (R) LLsAACR (L) LLS(1.0)AACR C:Carbamidomethylation,s:Phosphorylated S FASN 276046.1 1 13 175.1 481.87 HUMAN 1 -20.1 -37.2414 QELPRPQSPSDLDSL-p P54259;S101-p QELPRPQSPSDLDSL 0.705025067607996 0.206231598511761 -0.0656666666666667 0.152333333333333 2.85471714674886 9.02176390064012 -0.0656666666666667 0.152333333333333 0.518236843346174 0.125263231107376 -0.690746009452241 1.81147709730706 P54259 ATN1 P54259.S101.p_ATN1 P54259_S101s _1_1_101_101 P54259 P54259 Atrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14287.14287.3 13.74 8.48 1.521 5 1 1 0 1003.1774 2927.5475 S101s TMT10 90 (K) TKTEQELPRPQsPSDLDSLDGR (S) T(0.0)KT(0.0)EQELPRPQS(0.99)PS(0.0)DLDS(0.0)LDGR K:TMT10,s:Phosphorylated S ATN1 125583.1 3 3 869.1 209.92 HUMAN 1 -2.8547 9.0218 QELQQPQTQEKTSNS-p Q12888-2;T860-p QELQQPQTQEKTSNS 0.657664226760099 0.852834560274266 0.0683333333333333 0.046 3.41241058975588 0.972832354376206 0.0683333333333334 0.0459999999999999 0.455783858883549 0.799312794204367 0.803001928337933 0.267023552487401 Q12888 TP53BP1 Q12888.2.T860.p_TP53BP1 Q12888-2_T860t _1_1_860_860 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19172.19172.4 15.07 15.07 99 1 1 1 0 698.3574 2710.4412 T860t TMT10 845 (R) ADDPLRLDQELQQPQtQEK (T) ADDPLRLDQELQQPQT(1.0)QEK K:TMT10,t:Phosphorylated T TP53BP1 216167.2 1 38 3.1 2297.07 HUMAN 1 3.4124 0.9728 QELRRRLTPLQLEIQ-p Q8N163;T897-p QELRRRLTPLQLEIQ 0.418294874312453 0.0507442801508768 0.138 0.403666666666667 6.98458499415027 17.2924037091391 0.138 0.403666666666667 0.200235695493112 0.0186534698311497 1.458314626738 3.31786720598071 Q8N163 CCAR2 Q8N163.T897.p_CCAR2 Q8N163_T897t _1_1_897_897 Q8N163 Q8N163|Q8N163-2|G3V119 Cell cycle and apoptosis regulator protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15232.15232.3 13.93 13.93 99 1 1 1 0 482.9324 1366.8165 T897t Hydrogen 895 (R) RLtPLQLEIQR (V) RLT(1.0)PLQLEIQR t:Phosphorylated T CCAR2 103527.3 4 10 891.1 204.52 HUMAN 1 6.9846 17.2924 QEMGLHLSQSKLKME-p Q96T51;S618-p QEMGLHLSQSKLKME 0.172627501458585 0.67217752385782 -0.257 -0.052 15.1898539927609 2.35879140280267 -0.257 -0.052 0.0302701519285318 0.580926060819319 -2.91413487625087 -0.586797526353235 Q96T51 RUFY1 Q96T51.S618.p_RUFY1 Q96T51_S618s_1_1_618_618 Q96T51 Q96T51|Q96T51-2 RUN and FYVE domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18695.18695.3 18.72 18.72 2.716 2 1 1 0 971.4705 2816.4323 M613m S618s TMT10 602 (K) ICEEQEQALQEmGLHLsQSK (L) ICEEQEQALQEM(1.0)GLHLS(0.99)QS(0.0)K C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,s:Phosphorylated S RUFY1 80900.5 4 3 4594.1 29.08 HUMAN 1 -15.1899 -2.3588 QEMKGIGTPPNTTPI-p O96028-3;T110-p QEMKGIGTPPNTTPI 0.153364244244344 0.00159143383100496 -0.243666666666667 -0.874 16.3678054032333 44.9590007303843 -0.243666666666667 -0.874 0.0230791313934135 3.1922722815947e-05 -3.13913516552399 -12.6036642716034 O96028 WHSC1 O96028.3.T110.p_WHSC1 O96028-3_T110t_1_1_110_110 O96028-3 O96028|O96028-3|O96028-5|O96028-6|O96028-7 Isoform 3 of Histone-lysine N-methyltransferase NSD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18171.18171.4 16.02 13.71 3.032 4 1 1 0 673.1265 2608.5277 T110t N119n TMT10 107 (K) GIGtPPNTTPIKnGSPEIK (L) GIGT(0.99)PPN(0.0)T(0.0)T(0.0)PIKN(0.99)GS(0.0)PEIK K:TMT10,t:Phosphorylated T,n:Deamidated NSD2 72093.4 6 3 410.1 322.95 HUMAN 1 -16.3678 -44.959 QENDMVDSAPQWEAV-p Q9HCS5;S511-p QENDMVDSAPQWEAV 0.295243174589512 0.238065623238338 0.169333333333333 0.160666666666667 9.97684579802126 8.20997052472235 0.169333333333333 0.160666666666667 0.100534568951293 0.15100904030125 1.97768804926489 1.67102217604303 Q9HCS5 EPB41L4A Q9HCS5.S511.p_EPB41L4A Q9HCS5_S511s _1_1_511_511 Q9HCS5 Q9HCS5 Band 4.1-like protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22876.22876.3 20.49 20.49 99 1 1 1 0 856.0819 2486.2659 S511s TMT10 502 (R) IRQENDMVDsAPQWEAVLR (R) IRQENDMVDS(1.0)APQWEAVLR s:Phosphorylated S EPB41L4A 79741.9 2 9 696.1 241.4 HUMAN 1 9.9768 8.21 QENGHVKSNGDLSPK-p P49006;S36-p QENGHVKSNGDLSPK 0.76531183124278 0.738674172584289 -0.0883333333333333 -0.0586666666666666 2.23117170020803 1.81443041835233 -0.0883333333333334 -0.0586666666666667 0.598250169013268 0.658501787462152 -0.559409153522483 -0.467250085426452 P49006 MARCKSL1 P49006.S36.p_MARCKSL1 P49006_S36s _1_1_36_36 P49006 P49006 MARCKS-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17191.17191.5 28.13 22.55 1.818 6 1 1 0 949.4654 4663.3214 S36s TMT10 36 (K) sNGDLSPKGEGESPPVNGTDEAAGATGDAIEPAPPSQGAEAK (G) S(0.99)NGDLS(0.0)PKGEGES(0.0)PPVNGT(0.0)DEAAGAT(0.0)GDAIEPAPPS(0.0)QGAEAK K:TMT10,s:Phosphorylated S MARCKSL1 19585.5 11 3 402.1 327.42 HUMAN 1 -2.2312 -1.8144 QENGQPESPRRLSLG-p Q6ZRV2;S998-p QENGQPESPRRLSLG 0.711206464973155 0.560845399265014 0.0596666666666667 0.0616666666666667 2.78227850502044 3.38662610342306 0.0596666666666667 0.0616666666666667 0.526953325370839 0.458497940953096 0.675832713246082 0.797783051600083 Q6ZRV2 FAM83H Q6ZRV2.S998.p_FAM83H Q6ZRV2_S998s _1_1_998_998 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15143.15143.4 20.62 16.7 2.019 5 1 1 0 1117.2676 4386.0854 S998s TMT10 980 (R) RMEDEGGFPVPQENGQPEsPRRLSLGQGDSTEAATEER (G) RMEDEGGFPVPQENGQPES(0.99)PRRLS(0.0)LGQGDS(0.0)T(0.0)EAAT(0.0)EER s:Phosphorylated S FAM83H 127633.5 19 27 7.1 1347.23 HUMAN 1 2.7823 3.3866 QENVEDSTDEDAPLN-p Q7Z4S6-5;T1100-p QENVEDSTDEDAPLN 0.878091735475467 0.998780267598658 -0.0246666666666667 0.000166666666666685 1.11098574210467 0.00765068890920756 -0.0246666666666667 0.000166666666666688 0.774286033890671 0.998239914546979 -0.301490924136997 0.00230945325936984 Q7Z4S6 KIF21A Q7Z4S6.5.T1100.p_KIF21A Q7Z4S6-5_S1099sT1100t_2_2_1099_1100 Q7Z4S6-5 Q7Z4S6-5 Isoform 5 of Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32348.32348.5 29.96 29.96 3.243 8 2 2 0 1166.7584 5653.8158 S1099s T1100t M1121m TMT10 1076 (K) EKAELNPELDALLGHALQENVEDstDEDAPLNSPGSEGSTLSSDLmK (L) EKAELNPELDALLGHALQENVEDS(0.99)T(0.99)DEDAPLNS(0.0)PGS(0.0)EGS(0.0)T(0.0)LS(0.0)S(0.0)DLM(1.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T,m:Oxidized methionine KIF21A 184163.5 13 24 390.1 332.37 HUMAN 2 -1.111 0.0077 QEPAGAGSPSPPEDR-p Q08174-2;S1171-p QEPAGAGSPSPPEDR 0.914054775900012 0.132017901155423 0.0213333333333333 0.162666666666667 0.76350015689564 11.5918119311697 0.0213333333333333 0.162666666666667 0.838783703933213 0.0693136560396529 0.213455419679984 2.25905317354065 Q08174 PCDH1 Q08174.2.S1171.p_PCDH1 Q08174-2_S1171sS1173s_2_2_1171_1173 Q08174-2 Q08174-2 Isoform 2 of Protocadherin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18356.18356.4 9.34 9.34 3.075 6 2 2 0 944.9509 3616.8396 S1171s S1173s TMT10 1152 (K) LSTFVPYQDRGGQEPAGAGsPsPPEDRNTK (T) LS(0.0)T(0.0)FVPY(0.0)QDRGGQEPAGAGS(0.99)PS(0.99)PPEDRNT(0.0)K K:TMT10,s:Phosphorylated S PCDH1 134290.1 2 15 666.1 249.91 HUMAN 1 0.7635 11.5918 QEPGPGLTFEDSGNP-p O15417;T2534-p QEPGPGLTFEDSGNP 0.269806937830441 0.00765644293187018 -0.484666666666667 0.667666666666667 10.7810549783486 30.2132103397119 -0.484666666666667 0.667666666666667 0.0835400060085015 0.00095209210969552 -2.11779467441199 6.48687803327611 O15417 TNRC18 O15417.T2534.p_TNRC18 O15417_T2534t _1_1_2534_2534 O15417 O15417|H9KVB4 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19633.19633.3 16.22 16.22 1.113 4 1 1 0 1170.912 3430.7581 T2534t TMT10 2520 (K) ATDGDLAQEPGPGLtFEDSGNPKSPDK (A) AT(0.0)DGDLAQEPGPGLT(0.99)FEDS(0.0)GNPKS(0.0)PDK K:TMT10,t:Phosphorylated T TNRC18 316168 1 28 75.1 647.68 HUMAN 1 -10.7811 30.2132 QEPTGEPSPKRPRGR-p F5H6H0;S44-p QEPTGEPSPKRPRGR 0.560899556742354 0.154395245209893 -0.145 -0.166333333333333 4.6243755027645 10.6696265451698 -0.145 -0.166333333333333 0.344796183252478 0.0857111546071174 -1.03475010384199 -2.0974133478715 F5H6H0 HMGA2 F5H6H0.S44.p_HMGA2 F5H6H0_S44s _1_1_44_44 F5H6H0 F5H6H0|F5H2A4|P52926|P52926-2 High mobility group protein HMGI-C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6327.6327.3 12.54 12.54 4.152 2 1 1 0 741.0665 2141.2169 S44s TMT10 34 (R) KQQQEPTGEPsPK (R) KQQQEPT(0.0)GEPS(0.99)PK K:TMT10,s:Phosphorylated S HMGA2 16594.5 2 1 6290.1 12.54 HUMAN 1 -4.6244 -10.6696 QEQECPPSPEPTRKE-p P62070-4;S192-p QEQECPPSPEPTRKE 0.192286812023323 0.0515355492111663 -0.241 -0.268666666666667 13.9752734136735 17.1899486496026 -0.241 -0.268666666666667 0.0400380261267471 0.0190987584054865 -2.68837976338568 -3.29759302569407 P62070 RRAS2 P62070.4.S192.p_RRAS2 P62070-4_S192s _1_1_192_192 P62070-4 P62070-4|P62070-3|P62070-2 Isoform 4 of Ras-related protein R-Ras2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9650.9650.3 18.3 12.68 5.551 2 1 1 0 909.1367 2645.4324 S192s TMT10 183 (R) KFQEQECPPsPEPTRK (E) KFQEQECPPS(0.99)PEPT(0.0)RK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RRAS2 24423.3 15 1 2622.1 76.55 HUMAN 1 -13.9753 -17.1899 QEQELPPSPPSAPRK-p P10301;S201-p QEQELPPSPPSAPRK 0.154754532748189 0.310417372118417 0.353666666666667 -0.104666666666667 16.2761260518803 6.71279415110091 0.353666666666667 -0.104666666666667 0.0235715094748792 0.213167300234133 3.1213905121845 -1.41026590420479 P10301 RRAS P10301.S201.p_RRAS P10301_S201s _1_1_201_201 P10301 P10301 Ras-related protein R-Ras HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11936.12193.3 16.99 8.38 2.581 3 1 1 0 788.0793 2282.2545 S201s TMT10 192 (R) KYQEQELPPsPPSAPR (K) KY(0.0)QEQELPPS(0.99)PPS(0.0)APR K:TMT10,s:Phosphorylated S RRAS 23651.2 2 1 5704.1 16.99 HUMAN 1 16.2761 -6.7128 QEQFLNVSGMPQELN-p Q86X10;S316-p QEQFLNVSGMPQELN 0.1704511493715 0.017031123123275 -0.278666666666667 -0.453666666666667 15.3345029263301 24.4022244783383 -0.278666666666667 -0.453666666666667 0.0292785596124149 0.00362892131970403 -2.94142609858213 -4.8880428711856 Q86X10 RALGAPB Q86X10.S316.p_RALGAPB Q86X10_S316s _1_1_316_316 Q86X10 Q86X10|Q86X10-3|Q86X10-2|Q86X10-4 Ral GTPase-activating protein subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32411.32411.3 21.09 17.41 5.466 2 1 1 0 1070.1976 3128.5949 S316s TMT10 308 (K) FQEQFLNVsGMPQELNQYPCLK (H) FQEQFLNVS(0.99)GMPQELNQY(0.0)PCLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RALGAPB 168564.2 3 1 1153.1 171.93 HUMAN 1 -15.3345 -24.4022 QEQGGEASPQRTWEQ-p Q9UJU6;S232-p QEQGGEASPQRTWEQ 0.254688347480964 0.100668219533403 0.190333333333333 -0.437333333333333 11.3024153764835 13.1737304388376 0.190333333333333 -0.437333333333333 0.0740898068092301 0.04815339989422 2.20917717940198 -2.5410033712462 Q9UJU6 DBNL Q9UJU6.S232.p_DBNL Q9UJU6_S232s _1_1_232_232 Q9UJU6 Q9UJU6|Q9UJU6-5 Drebrin-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12697.12697.4 21.24 21.24 2.416 4 1 1 0 758.1049 2949.4288 S232s TMT10 224 (R) YQEQGGEAsPQRTWEQQQEVVSR (N) Y(0.0)QEQGGEAS(0.99)PQRT(0.0)WEQQQEVVS(0.0)R s:Phosphorylated S DBNL 48491.7 2 4 1388.1 147.4 HUMAN 1 11.3024 -13.1737 QEQGGEASPQSRTWE-p Q9UJU6-2;S232-p QEQGGEASPQSRTWE 0.594186544234629 0.0100414476511234 -0.0706666666666667 -0.488666666666667 4.16955892951268 28.0781309182787 -0.0706666666666667 -0.488666666666667 0.382863625061303 0.00155663541971929 -0.949405324526697 -5.85952961536092 Q9UJU6 DBNL Q9UJU6.2.S232.p_DBNL Q9UJU6-2_S232s _1_1_232_232 Q9UJU6-2 Q9UJU6-3|Q9UJU6-2|B4DDD6|Q9UJU6-6|Q9UJU6-4 Isoform 2 of Drebrin-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5121.5121.3 15.88 15.88 5.321 3 1 1 0 582.595 1665.803 S232s TMT10 224 (R) YQEQGGEAsPQSR (T) Y(0.0)QEQGGEAS(0.99)PQS(0.0)R s:Phosphorylated S DBNL 48578.8 2 11 1388.2 147.4 HUMAN 1 -4.1696 -28.0781 QEQSRRFSLNLGSIT-p Q9Y6V0-5;S906-p QEQSRRFSLNLGSIT 0.0893916699807837 0.73537994606603 -0.352666666666667 0.0636666666666667 22.3278597305491 1.8409435251691 -0.352666666666667 0.0636666666666667 0.00585078348642646 0.654493966730539 -4.39730783620845 0.47322906614659 Q9Y6V0 PCLO Q9Y6V0.5.S906.p_PCLO Q9Y6V0-5_S906s _1_1_906_906 Q9Y6V0-5 Q9Y6V0-5|Q9Y6V0-6|Q9Y6V0-2 Isoform 5 of Protein piccolo HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25199.25199.4 12.92 12.1 3.611 3 1 1 0 515.0359 1977.1533 S906s TMT10 904 (R) RFsLNLGSITDAPK (S) RFS(0.99)LNLGS(0.0)IT(0.0)DAPK K:TMT10,s:Phosphorylated S PCLO 562515 2 7 1007.1 189 HUMAN 1 -22.3279 1.8409 QEQVLNASRAKK___-p Q99543;S617-p QEQVLNASRAKK___ 0.676823734876953 0.0376881526945584 0.087 -0.294 3.17369700126285 19.1277044516957 0.087 -0.294 0.48153770642451 0.0122244563694448 0.755476615437034 -3.69093351507166 Q99543 DNAJC2 Q99543.S617.p_DNAJC2 Q99543_S617s _1_1_617_617 Q99543 Q99543|Q99543-2 DnaJ homolog subfamily C member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8354.8354.2 10.67 10.67 99 1 1 1 0 748.3757 1415.7804 S617s TMT10 608 (K) AAQEQVLNAsR (A) AAQEQVLNAS(1.0)R s:Phosphorylated S DNAJC2 72508.6 1 6 2137.1 96.08 HUMAN 1 3.1737 -19.1277 QEQVPEASQLSQLTS-p Q8N680;S175-p QEQVPEASQLSQLTS 0.165031842295347 0.336036140909387 0.228666666666667 -0.108 15.6662507185369 6.27563069438436 0.228666666666667 -0.108 0.0271253236129586 0.23574198201152 3.00436606017022 -1.3331890612884 Q8N680 ZBTB2 Q8N680.S175.p_ZBTB2 Q8N680_S175s _1_1_175_175 Q8N680 Q8N680 Zinc finger and BTB domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29385.29385.3 13.68 9.43 1.231 5 1 1 0 983.8342 2869.5217 S175s TMT10 166 (R) ISQEQVPEAsQLSQLTSNLAQVNR (T) IS(0.0)QEQVPEAS(0.99)QLS(0.0)QLT(0.0)S(0.0)NLAQVNR s:Phosphorylated S ZBTB2 58248.7 2 1 2616.1 76.7 HUMAN 1 15.6663 -6.2756 QERDSCISPSEPETK-p Q8TDB6;S221-p QERDSCISPSEPETK 0.584827398456479 0.356581552807003 -0.0766666666666667 -0.236333333333333 4.28345268874573 5.94059542033252 -0.0766666666666667 -0.236333333333333 0.372953537751799 0.254648110456872 -0.970938704581027 -1.27367372154921 Q8TDB6 DTX3L Q8TDB6.S221.p_DTX3L Q8TDB6_S221s _1_1_221_221 Q8TDB6 Q8TDB6 E3 ubiquitin-protein ligase DTX3L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10172.10172.4 10.28 7.13 1.133 5 1 1 0 771.6481 3003.6024 S221s TMT10 209 (R) KPLSQQERDSCIsPSEPETK (A) KPLS(0.0)QQERDS(0.0)CIS(0.99)PS(0.0)EPET(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DTX3L 84636.9 3 3 2047.1 100.69 HUMAN 1 -4.2835 -5.9406 QERDTGQSPQKGLQR-p O60292;S1534-p QERDTGQSPQKGLQR 0.689296686018885 0.0173712533161807 -0.0553333333333333 -0.371 3.03249167577101 24.2632333514545 -0.0553333333333333 -0.371 0.497451600409103 0.00374693936234402 -0.727004032052851 -4.85373754344187 O60292 SIPA1L3 O60292.S1534.p_SIPA1L3 O60292_S1534s _1_1_1534_1534 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19473.19473.5 15.87 15.87 2.26 2 1 1 0 653.7519 3184.7603 S1534s TMT10 1516 (K) KLIIMDNLGPEQERDTGQsPQK (G) KLIIMDNLGPEQERDT(0.0)GQS(0.99)PQK K:TMT10,s:Phosphorylated S SIPA1L3 195918.6 11 22 144.1 520.25 HUMAN 1 -3.0325 -24.2632 QEREETESKCDSEGE-p P29374;S557-p QEREETESKCDSEGE 0.468467993613407 0.0239943962805675 0.104 0.38 6.08083078700048 22.081913068708 0.104 0.38 0.246556763944333 0.00619168271156622 1.29895014137093 4.33607861191341 P29374 ARID4A P29374.S557.p_ARID4A P29374_S557sS561s_2_2_557_561 P29374 P29374|P29374-2 AT-rich interactive domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14677.14677.4 9.76 9.76 2.247 6 2 2 0 1096.2147 4221.8837 S557s S561s TMT10 549 (K) SQEREETEsKCDsEGEEDEEDMEPCLTGTK (V) S(0.0)QEREET(0.0)ES(0.99)KCDS(0.99)EGEEDEEDMEPCLT(0.0)GT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ARID4A 143719.1 2 15 532.1 280.77 HUMAN 1 6.0808 22.0819 QEREKQLSPEAQARI-p A0A0U1RRH6;S530-p QEREKQLSPEAQARI 0.786438754431518 0.487815396215938 0.0386666666666667 0.0703333333333333 2.01371625309569 4.16570225538481 0.0386666666666667 0.0703333333333334 0.628967745513223 0.383203771233594 0.511837464522482 0.948508569044906 A0A0U1RRH6 NotFound A0A0U1RRH6.S530.p_NotFound A0A0U1RRH6_S530s _1_1_530_530 A0A0U1RRH6 A0A0U1RRH6|O94880|O94880-2 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7077.7077.2 11.98 11.98 99 1 1 1 0 654.8293 1228.6847 S530s TMT10 528 (K) QLsPEAQAR (I) QLS(1.0)PEAQAR s:Phosphorylated S PHF14 109152.4 3 13 126.1 543.2 HUMAN 1 2.0137 4.1657 QERELEISVGKSVSH-p Q92794;S812-p QERELEISVGKSVSH 0.49441902354246 0.0806703729273232 0.100333333333333 -0.623666666666667 5.63333184018517 14.4998773488738 0.100333333333333 -0.623666666666667 0.273317107513381 0.0354823409825161 1.21895793278375 -2.78342588431605 Q92794 KAT6A Q92794.S812.p_KAT6A Q92794_S812s _1_1_812_812 Q92794 Q92794 Histone acetyltransferase KAT6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19408.19408.2 11.26 4.3 99 1 1 1 0 706.8943 1332.8139 S812s TMT10 808 (R) ELEIsVGK (S) ELEIS(1.0)VGK K:TMT10,s:Phosphorylated S KAT6A 227705.4 3 12 903.1 203.52 HUMAN 1 5.6333 -14.4999 QERFADRSLLEMEKR-p O14974;S978-p QERFADRSLLEMEKR 0.191125222863442 0.053692037920112 -0.400333333333333 -0.276666666666667 14.0329032332154 16.9321852211852 -0.400333333333333 -0.276666666666667 0.0395102408116502 0.020266627156162 -2.69896158112254 -3.24682828318201 O14974 PPP1R12A O14974.S978.p_PPP1R12A O14974_S978s _1_1_978_978 O14974 O14974 Protein phosphatase 1 regulatory subunit 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20530.20530.3 12.36 12.36 99 1 1 1 0 626.327 1796.9981 S978s TMT10 974 (R) FADRsLLEMEK (R) FADRS(1.0)LLEMEK K:TMT10,s:Phosphorylated S PPP1R12A 115678 1 13 286.1 385.3 HUMAN 1 -14.0329 -16.9322 QERGLNTSQESDDDI-p Q5VV41;S227-p QERGLNTSQESDDDI 0.431732922980342 0.768942344155265 0.113666666666667 0.038 6.71599927219264 1.57764818911287 0.113666666666667 0.038 0.213010039438162 0.695400792189242 1.41120295242669 0.413051188443723 Q5VV41 ARHGEF16 Q5VV41.S227.p_ARHGEF16 Q5VV41_S227sS230s_2_2_227_230 Q5VV41 Q5VV41 Rho guanine nucleotide exchange factor 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25936.25936.3 14.92 14.92 1.125 8 2 2 0 1409.0092 4065.0966 S227s S230s TMT10 223 (R) GLNTsQEsDDDILDESSSPEGTQKVDATIVVK (S) GLNT(0.0)S(0.99)QES(0.99)DDDILDES(0.0)S(0.0)S(0.0)PEGT(0.0)QKVDAT(0.0)IVVK K:TMT10,s:Phosphorylated S ARHGEF16 80388.8 8 14 597.1 263.65 HUMAN 1 6.716 1.5776 QERGLPPSMERGYPP-p P38159;S352-p QERGLPPSMERGYPP 0.886118944763575 0.901510588440112 -0.024 0.0146666666666667 1.02796789765303 0.627925777510514 -0.024 0.0146666666666667 0.789229318624121 0.865381132504874 -0.280879241391356 0.177736970578897 P38159 RBMX P38159.S352.p_RBMX P38159_S352s _1_1_352_352 P38159 P38159|P38159-2|H3BUY5 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12412.13029.3 15.93 15.93 15.927 2 1 1 0 621.6444 1782.9522 S352s TMT10 348 (R) GLPPsMERGYPPPR (D) GLPPS(0.99)MERGY(0.0)PPPR s:Phosphorylated S RBMX 42331.1 42 31 102.1 595.29 HUMAN 1 -1.028 0.6279 QERGLPPSVERGYPS-p Q96E39;S351-p QERGLPPSVERGYPS 0.973803236195272 0.124599442842697 0.00566666666666666 0.161666666666667 0.226205628911474 11.9304580532985 0.00566666666666666 0.161666666666667 0.949247445535554 0.0641141951348008 0.0666581568447858 2.31885671261708 Q96E39 RBMXL1 Q96E39.S351.p_RBMXL1 Q96E39_S351s _1_1_351_351 Q96E39 Q96E39 RNA binding motif protein, X-linked-like-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10462.11082.2 10.45 6.4 99 1 1 1 0 582.3048 1083.636 S351s TMT10 347 (R) GLPPsVER (G) GLPPS(1.0)VER s:Phosphorylated S RBMXL1 42197.9 6 44 102.2 595.29 HUMAN 1 0.2262 11.9305 QERIRERSKPVHELN-p P08493-2;S87-p QERIRERSKPVHELN 0.176075571430546 0.417163804906379 -0.373 0.161333333333333 14.9890533164012 5.05011831649809 -0.373 0.161333333333333 0.0317025844686142 0.312599420331444 -2.87639836442547 1.11300780804644 P08493 MGP P08493.2.S87.p_MGP P08493-2_S87s _1_1_87_87 P08493-2 P08493-2 Isoform 2 of Matrix Gla protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5606.5606.3 7.81 7.81 99 1 1 1 0 539.9682 1537.9215 S87s TMT10 87 (R) sKPVHELNR (E) S(1.0)KPVHELNR K:TMT10,s:Phosphorylated S MGP 15496.3 1 2 4178.1 35.99 HUMAN 1 -14.9891 5.0501 QERIRLFSADPFDLE-p Q5TDH0-3;S194-p QERIRLFSADPFDLE 0.0241132206334896 0.252268459847927 -0.677 -0.181333333333333 37.6236135807462 7.87673321965739 -0.677 -0.181333333333333 0.000172837765079362 0.163052205663913 -9.13165843782909 -1.61326654824753 Q5TDH0 DDI2 Q5TDH0.3.S194.p_DDI2 Q5TDH0-3_S194s _1_1_194_194 Q5TDH0-3 Q5TDH0-3|Q5TDH0-2 Isoform 3 of Protein DDI1 homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30474.30474.3 14.78 13.58 99 1 1 1 0 620.9719 1780.9319 S194s Hydrogen 192 (R) LFsADPFDLEAQAK (I) LFS(1.0)ADPFDLEAQAK K:TMT10-Lys-Only,s:Phosphorylated S DDI2 47083.7 3 4 1918.1 107.11 HUMAN 1 -37.6236 -7.8767 QERLRVQSPEPPAPE-p A0A0G2JPP5;S1475-p QERLRVQSPEPPAPE 0.34689437832203 0.261087358319125 0.153333333333333 0.133666666666667 8.54306422021858 7.68520710884286 0.153333333333333 0.133666666666667 0.139860017413943 0.170403805423399 1.7292631645263 1.58001987097756 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1475.p_SCRIB A0A0G2JPP5_S1475s _1_1_1475_1475 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4563.4563.2 13.65 10.85 99 1 1 1 0 643.7927 1206.6113 S1475s Hydrogen 1473 (R) VQsPEPPAPER (A) VQS(1.0)PEPPAPER s:Phosphorylated S SCRIB 178690.9 9 35 22.1 1004.81 HUMAN 1 8.5431 7.6852 QERRAPVTPSSASRY-p A0A0U1RQW6;T123-p QERRAPVTPSSASRY 0.228095422318106 0.604525213983507 0.241 -0.0626666666666667 12.3336923157747 2.96557569493579 0.241 -0.0626666666666667 0.0584293114432009 0.505175675092131 2.39166600675383 -0.713312161878746 A0A0U1RQW6 NotFound A0A0U1RQW6.T123.p_NotFound A0A0U1RQW6_T123t _1_1_123_123 A0A0U1RQW6 A0A0U1RQW6|Q9Y2E4|E7EPU2 Disco-interacting protein 2 homolog C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4184.4184.3 12.9 12.9 3.713 4 1 1 0 479.9185 1357.7749 T123t TMT10 119 (R) RAPVtPSSASR (Y) RAPVT(0.99)PS(0.0)S(0.0)AS(0.0)R t:Phosphorylated T DIP2C 180479.8 1 3 3066.1 61.65 HUMAN 1 12.3337 -2.9656 QESCLGNSPPFEKES-p Q86W56;S291-p QESCLGNSPPFEKES 0.191102046396083 0.0223895156508591 -0.281 0.329 14.0468037877788 22.5362684402208 -0.281 0.329 0.0393839817231131 0.00557664701695416 -2.70151579652274 4.44080515024434 Q86W56 BPHL Q86W56.S291.p_BPHL Q86W56_S291s _1_1_291_291 Q86W56 Q86W56|Q86W56-2|Q86W56-3 Poly(ADP-ribose) glycohydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16196.16706.2 16.25 13.14 2.554 2 1 1 0 1015.9871 1950.9995 S291s TMT10 284 (R) QESCLGNsPPFEK (E) QES(0.0)CLGNS(0.99)PPFEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PARG 112534.8 9 6 855.1 211.13 HUMAN 1 -14.0468 22.5363 QESDGVEYIFISKHL-p Q5T2T1;Y417-p QESDGVEYIFISKHL 0.558906099125035 0.419331351405691 0.0813333333333333 0.138 4.6625192309767 5.02303090279167 0.0813333333333333 0.138 0.341781126528858 0.314555229476365 1.04183338363841 1.10805215203004 Q5T2T1 MPP7 Q5T2T1.Y417.p_MPP7 Q5T2T1_Y417y _1_1_417_417 Q5T2T1 Q5T2T1|S4R337|Q5T2T1-2 MAGUK p55 subfamily member 7 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.30567.30644.3 8.2 8.2 8.201 4 1 1 0 714.02 2060.0952 Y417y TMT10 409 (R) SQESDGVEyIFISK (H) S(0.0)QES(0.0)DGVEY(0.99)IFIS(0.0)K K:TMT10,y:Phosphorylated Y MPP7 65693.7 1 1 128.1 24.62 HUMAN 1 4.6625 5.023 QESGLHLSPTAAEAK-p Q15599;S303-p QESGLHLSPTAAEAK 0.967385376512077 0.0035978904898872 -0.00766666666666666 -0.633333333333333 0.280005521925348 36.3971256626306 -0.00766666666666666 -0.633333333333333 0.937560814844393 0.000229238434392497 -0.0820443238383875 -8.62305081952216 Q15599 SLC9A3R2 Q15599.S303.p_SLC9A3R2 Q15599_S303s _1_1_303_303 Q15599 Q15599|H3BQS0|Q15599-3 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22800.22800.5 26.27 21.35 1.344 7 1 1 0 963.0853 4731.4196 S303s TMT10 275 (R) SDLPGSDKDTEDGSAWKQDPFQESGLHLsPTAAEAK (E) S(0.0)DLPGS(0.0)DKDT(0.0)EDGS(0.0)AWKQDPFQES(0.0)GLHLS(0.99)PT(0.0)AAEAK K:TMT10,s:Phosphorylated S SLC9A3R2 37641.3 3 7 2026.1 101.71 HUMAN 1 -0.28 -36.3971 QESLGRLSPKTNTCR-p Q96C24;S74-p QESLGRLSPKTNTCR 0.965959546905574 0.0281324370185015 -0.00633333333333334 0.305666666666667 0.290719210737146 21.0151740621291 -0.00633333333333334 0.305666666666667 0.935250779685373 0.00791557728919591 -0.085088213047204 4.09620081850044 Q96C24 SYTL4 Q96C24.S74.p_SYTL4 Q96C24_S74s _1_1_74_74 Q96C24 Q96C24|Q96C24-2 Synaptotagmin-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10789.10789.3 11.1 6.21 3.886 2 1 1 0 604.985 1732.978 S74s TMT10 66 (R) CQESLGRLsPK (T) CQES(0.0)LGRLS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SYTL4 76649.8 2 2 1078.1 180.34 HUMAN 1 -0.2907 21.0152 QESRGHVSPAEDQTI-p Q92622;S266-p QESRGHVSPAEDQTI 0.990095172213355 0.935548017263497 -0.00200000000000001 -0.00866666666666664 0.0897177677463587 0.408436837630896 -0.00200000000000001 -0.00866666666666665 0.979553640983488 0.910240837970922 -0.0268344253554103 -0.118099283348643 Q92622 KIAA0226 Q92622.S266.p_KIAA0226 Q92622_S266s _1_1_266_266 Q92622 Q92622|Q92622-2|Q92622-3|E9PEM3 Run domain Beclin-1-interacting and cysteine-rich domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19271.19271.3 21.27 17.79 5.357 4 1 1 0 880.4524 2559.3728 S266s TMT10 263 (R) GHVsPAEDQTIQAPPVSVSALAR (D) GHVS(0.99)PAEDQT(0.0)IQAPPVS(0.0)VS(0.0)ALAR s:Phosphorylated S RUBCN 110331.4 4 3 919.1 200.35 HUMAN 1 -0.0897 -0.4084 QESRHLLSPQLVQYQ-p Q9P209;S237-p QESRHLLSPQLVQYQ 0.21511781851997 0.0134389710405779 -0.232 -0.468666666666667 12.8583024400151 26.0274279249025 -0.232 -0.468666666666667 0.0517809192429635 0.00249607256873359 -2.48556485987305 -5.30181372148778 Q9P209 CEP72 Q9P209.S237.p_CEP72 Q9P209_S237s _1_1_237_237 Q9P209 Q9P209 Centrosomal protein of 72 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20175.20175.3 16.56 16.56 9.181 3 1 1 0 823.4192 2388.2746 S237s TMT10 234 (R) HLLsPQLVQYQCGDSGK (Q) HLLS(0.99)PQLVQY(0.0)QCGDS(0.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CEP72 72515.1 1 1 5157.1 22.33 HUMAN 1 -12.8583 -26.0274 QESTADESEDDMSSQ-p Q9BXW9;S1412-p QESTADESEDDMSSQ 0.337603610474496 0.0584025953292132 -0.156333333333333 -0.272 8.78275338801333 16.4342447360908 -0.156333333333333 -0.272 0.132350218065437 0.0227287486734778 -1.77075722073974 -3.14971938633418 Q9BXW9 FANCD2 Q9BXW9.S1412.p_FANCD2 Q9BXW9_S1412s _1_1_1412_1412 Q9BXW9 Q9BXW9-1 Fanconi anemia group D2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7735.7735.2 23.26 23.26 5.913 8 1 1 0 1450.1127 2819.2525 S1412s TMT10 1401 (K) SQNSQESTADEsEDDMSSQASK (S) S(0.0)QNS(0.0)QES(0.0)T(0.0)ADES(0.99)EDDMS(0.0)S(0.0)QAS(0.0)K K:TMT10,s:Phosphorylated S FANCD2 165894.1 6 8 960.1 194.41 HUMAN 1 -8.7828 -16.4342 QESTNLPSPNKSIRH-p Q68DQ2;S457-p QESTNLPSPNKSIRH 0.196344324530871 0.0529773882018352 0.345333333333333 -0.49 13.7731569878455 17.014386162087 0.345333333333333 -0.49 0.0419453962275921 0.0198866387107476 2.65136340864004 -3.2629798313184 Q68DQ2 CRYBG3 Q68DQ2.S457.p_CRYBG3 Q68DQ2_S457s_1_1_457_457 Q68DQ2 Q68DQ2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21003.21003.5 26.41 26.41 6.369 11 1 1 0 1070.1239 5265.6312 N454n S457s TMT10 419 (R) TLVQREELVEPQGPAISDFSCSKSDGSDTTEQESTnLPsPNK (S) T(0.0)LVQREELVEPQGPAIS(0.0)DFS(0.0)CS(0.0)KS(0.0)DGS(0.0)DT(0.0)T(0.0)EQES(0.0)T(0.0)N(0.99)LPS(0.99)PN(0.0)K C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S CRYBG3 333308.2 1 5 582.1 265.87 HUMAN 1 13.7732 -17.0144 QESWERLSDGGKAGP-p Q12770;S838-p QESWERLSDGGKAGP 0.143638422086766 0.0495604954384215 -0.417666666666667 -0.271666666666667 17.2091896421457 17.4528283663024 -0.417666666666667 -0.271666666666667 0.019014330386219 0.0179769977211404 -3.30395071700704 -3.3497244438925 Q12770 SCAP Q12770.S838.p_SCAP Q12770_S838s _1_1_838_838 Q12770 Q12770|Q12770-2|A0A0A0MTG6|Q12770-4 Sterol regulatory element-binding protein cleavage-activating protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18279.18279.3 18.48 13.17 1.16 4 1 1 0 934.7849 2722.3684 S838s TMT10 821 (R) DSGVGSGLEAQESWERLsDGGK (A) DS(0.0)GVGS(0.0)GLEAQES(0.0)WERLS(0.99)DGGK K:TMT10,s:Phosphorylated S SCAP 141666.3 2 3 1353.1 150.81 HUMAN 1 -17.2092 -17.4528 QETKDSGSQEVLSEL-p Q9BVJ6;S453-p QETKDSGSQEVLSEL 0.636418069804288 0.676113012034813 0.0686666666666667 0.0706666666666667 3.66113877903157 2.3214044310354 0.0686666666666667 0.0706666666666667 0.430413735374879 0.585948648511565 0.85177518076737 0.578787534181583 Q9BVJ6 UTP14A Q9BVJ6.S453.p_UTP14A Q9BVJ6_S453s _1_1_453_453 Q9BVJ6 Q9BVJ6|Q9BVJ6-3|Q9BVJ6-2 U3 small nucleolar RNA-associated protein 14 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17306.17306.2 14.53 8.68 2.098 3 1 1 0 814.8926 1548.8067 S453s TMT10 450 (K) DSGsQEVLSELR (V) DS(0.0)GS(0.99)QEVLS(0.0)ELR s:Phosphorylated S UTP14A 88147.4 2 10 550.1 274.41 HUMAN 1 3.6611 2.3214 QETLRRASMQPIQIA-p Q14980;S1969-p QETLRRASMQPIQIA 0.641331338953564 0.679789686484348 0.0673333333333333 -0.057 3.60216259056529 2.29088462950722 0.0673333333333333 -0.057 0.436298521161444 0.590080872308067 0.84027534207122 -0.572228430684587 Q14980 NUMA1 Q14980.S1969.p_NUMA1 Q14980_S1969s _1_1_1969_1969 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17915.17915.3 14.31 14.31 14.311 4 1 1 0 747.0539 2159.1804 S1969s TMT10 1967 (R) RAsMQPIQIAEGTGITTR (Q) RAS(0.99)MQPIQIAEGT(0.0)GIT(0.0)T(0.0)R s:Phosphorylated S NUMA1 239339.3 1 30 31.1 900.97 HUMAN 1 3.6022 -2.2909 QETPLLHSLTQEGKR-p Q13796;S589-p QETPLLHSLTQEGKR 0.255264993053251 0.00433205919333218 -0.219333333333333 -0.578666666666667 11.2780466910157 34.7266444332043 -0.219333333333333 -0.578666666666667 0.0745067004375084 0.000336771674774003 -2.20489428437127 -7.99412196771085 Q13796 SHROOM2 Q13796.S589.p_SHROOM2 Q13796_S589s _1_1_589_589 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22552.22552.3 13.33 13.33 1.143 3 1 1 0 830.4336 2409.3212 S589s TMT10 579 (R) ICPQETPLLHsLTQEGK (R) ICPQET(0.0)PLLHS(0.99)LT(0.0)QEGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SHROOM2 177605.1 1 9 90.1 622.62 HUMAN 1 -11.278 -34.7266 QETQAPESPGENSEQ-p Q7Z434;S152-p QETQAPESPGENSEQ 0.904619854374241 0.812612092009076 0.0193333333333333 0.0246666666666667 0.855685826981785 1.26322605650548 0.0193333333333333 0.0246666666666667 0.821166865977616 0.74761394639996 0.237276404400026 0.338627543330445 Q7Z434 MAVS Q7Z434.S152.p_MAVS Q7Z434_S152s _1_1_152_152 Q7Z434 Q7Z434 Mitochondrial antiviral-signaling protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21045.21045.3 34.57 35.95 5.134 7 1 1 0 1398.349 4113.0487 S152s TMT10 135 (R) EKEPSYPMPVQETQAPEsPGENSEQALQTLSPR (A) EKEPS(0.0)Y(0.0)PMPVQET(0.0)QAPES(0.99)PGENS(0.0)EQALQT(0.0)LS(0.0)PR K:TMT10,s:Phosphorylated S MAVS 57097.6 14 2 1410.1 145.44 HUMAN 1 0.8557 1.2632 QETVADFTPKKEEEE-p O75400;T373-p QETVADFTPKKEEEE 0.152460459216563 0.267462258411918 -0.362333333333333 0.183 16.4239149178012 7.54102028619671 -0.362333333333333 0.183 0.0227828739951408 0.176156215474094 -3.15001546380898 1.55495898516946 O75400 PRPF40A O75400.T373.p_PRPF40A O75400_T373t _1_1_373_373 O75400 O75400|O75400-3|O75400-2 Pre-mRNA-processing factor 40 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12917.12917.5 11.93 5.86 2.213 3 1 1 0 729.8022 3565.0134 T373t TMT10 366 (K) QETVADFtPKKEEEESQPAKK (T) QET(0.0)VADFT(0.99)PKKEEEES(0.0)QPAKK K:TMT10,t:Phosphorylated T PRPF40A 109088.4 3 6 718.2 237.38 HUMAN 1 -16.4239 7.541 QEVAGRDYHFVSRQA-p Q8N3R9;Y528-p QEVAGRDYHFVSRQA 0.45173892138472 0.258170455972091 -0.181333333333333 -0.152 6.37111971028425 7.74786827735273 -0.181333333333333 -0.152 0.230615253331394 0.167962825677793 -1.35041672097717 -1.59090205318131 Q8N3R9 MPP5 Q8N3R9.Y528.p_MPP5 Q8N3R9_Y528y _1_1_528_528 Q8N3R9 Q8N3R9|Q8N3R9-2 MAGUK p55 subfamily member 5 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8734.8781.3 18.42 18.42 7.018 2 1 1 0 663.3116 1907.9561 Y528y TMT10 520 (R) DQEVAGRDyHFVSR (Q) DQEVAGRDY(0.99)HFVS(0.0)R y:Phosphorylated Y MPP5 77577.4 2 1 189.1 18.42 HUMAN 1 -6.3711 -7.7479 QEVESMETPESKDLG-p O43829;T225-p QEVESMETPESKDLG 0.405651195639968 0.102462626469132 0.155333333333333 -0.240333333333333 7.23548494589905 13.0672607882914 0.155333333333333 -0.240333333333333 0.188995518149004 0.0493484960009376 1.50217391086827 -2.52180186679187 O43829 ZBTB14 O43829.T225.p_ZBTB14 O43829_T225t _1_1_225_225 O43829 O43829 Zinc finger and BTB domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13727.13727.3 17.15 14.22 2.359 4 1 1 0 961.4662 2802.4257 T225t TMT10 212 (R) KVNCYGQEVESMEtPESK (D) KVNCY(0.0)GQEVES(0.0)MET(0.99)PES(0.0)K K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ZBTB14 51925.3 1 3 1836.1 111.99 HUMAN 1 7.2355 -13.0673 QEVKLQNSSKDRELQ-p O43896;S852-p QEVKLQNSSKDRELQ 0.0339658581076077 0.0038559829297549 -0.709 -0.701666666666667 34.2323606295293 35.69560832538 -0.709 -0.701666666666667 0.000377367015426567 0.000269425791556716 -7.83059446058979 -8.35384953017159 O43896 KIF1C O43896.S852.p_KIF1C O43896_S852s _1_1_852_852 O43896 O43896 Kinesin-like protein KIF1C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5491.5491.3 7.77 7.77 1.246 2 1 1 0 495.9326 1405.8163 S852s TMT10 849 (K) LQNsSKDR (E) LQNS(0.99)S(0.0)KDR K:TMT10,s:Phosphorylated S KIF1C 123800.2 1 5 954.1 195.97 HUMAN 1 -34.2324 -35.6956 QEVLEEQSEDEDREA-p P18858;S141-p QEVLEEQSEDEDREA 0.394190136602339 0.0215405404863171 -0.115 -0.337 7.46027144097 22.7876702080215 -0.115 -0.337 0.179462145662708 0.00526299526385484 -1.54136475952976 -4.49943222454576 P18858 LIG1 P18858.S141.p_LIG1 P18858_S141s _1_1_141_141 P18858 P18858|P18858-3|P18858-2|M0R0Q7 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17988.17988.3 20.68 20.68 11.232 2 1 1 0 896.1002 2606.3197 S141s TMT10 132 (R) TIQEVLEEQsEDEDREAK (R) T(0.0)IQEVLEEQS(0.99)EDEDREAK K:TMT10,s:Phosphorylated S LIG1 102361.8 17 8 302.1 376.44 HUMAN 1 -7.4603 -22.7877 QEVQSSRSGRGGNFG-p P22626;S201-p QEVQSSRSGRGGNFG 0.952352960311039 0.650530233103186 0.0166666666666666 0.0473333333333333 0.42061683111076 2.54931209298911 0.0166666666666667 0.0473333333333334 0.90769160102881 0.555992317501358 0.121483960275449 0.627204901486704 P22626 HNRNPA2B1 P22626.S201.p_HNRNPA2B1 P22626_S201s _1_1_201_201 P22626 P22626 Heterogeneous nuclear ribonucleoproteins A2/B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8771.8771.3 9.18 2.95 6.401 2 1 1 0 541.5808 1542.7611 S201s TMT10 201 (R) sGRGGNFGFGDSR (G) S(0.99)GRGGNFGFGDS(0.0)R s:Phosphorylated S HNRNPA2B1 37486.1 2 8 299.1 378.08 HUMAN 1 0.4206 2.5493 QEWVIHASPVKGTVR-p Q5T7B8;S646-p QEWVIHASPVKGTVR 0.616312626410794 0.0015175837239283 -0.0763333333333333 -1.078 3.89978636987833 45.4830502331635 -0.0763333333333334 -1.078 0.407400317395324 2.82940408805975e-05 -0.897924583379763 -12.8955522422543 Q5T7B8 KIF24 Q5T7B8.S646.p_KIF24 Q5T7B8_S646s _1_1_646_646 Q5T7B8 Q5T7B8|Q5T7B8-2|Q5T7B8-4 Kinesin-like protein KIF24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18047.18047.3 17.51 17.51 10.012 3 1 1 0 720.7126 2080.1591 S646s TMT10 635 (R) GSPSQEWVIHAsPVK (G) GS(0.0)PS(0.0)QEWVIHAS(0.99)PVK K:TMT10,s:Phosphorylated S KIF24 153269.8 2 2 1608.1 127.82 HUMAN 1 -3.8998 -45.4831 QEYKSLQSELDEINK-p Q16625;S448-p QEYKSLQSELDEINK 0.690945783326679 0.732765530045828 -0.0753333333333333 -0.036 3.01051782718778 1.86189750139254 -0.0753333333333334 -0.036 0.499974917355363 0.651343749479747 -0.722547779127165 -0.477942182426203 Q16625 OCLN Q16625.S448.p_OCLN Q16625_S448s _1_1_448_448 Q16625 Q16625|A0A0G2JMZ8|Q16625-3|Q16625-2|Q16625-4|Q16625-5 Occludin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23791.23791.3 12.13 9.39 2.902 2 1 1 0 605.3164 1733.9686 S448s TMT10 445 (K) SLQsELDEINK (E) S(0.0)LQS(0.99)ELDEINK K:TMT10,s:Phosphorylated S OCLN 59542.1 2 11 840.1 214.78 HUMAN 1 -3.0105 -1.8619 QEYYKRYSPDELRYL-p S5FZ81;S270-p QEYYKRYSPDELRYL 0.659626370602384 0.0310327192857492 0.0606666666666667 0.294 3.38697424626956 20.3826962931517 0.0606666666666667 0.294 0.458461187923253 0.00915651836264354 0.797972473199925 3.9577724818502 S5FZ81 NotFound S5FZ81.S270.p_NotFound S5FZ81_S270s _1_1_270_270 S5FZ81 Q8WUB8|Q8WUB8-2|Q8WUB8-3|S5FZ81 PHD finger protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7832.7832.2 7.29 7.29 7.288 2 1 1 0 672.83 1264.6847 S270s TMT10 268 (K) RYsPDELR (Y) RY(0.0)S(0.99)PDELR s:Phosphorylated S PHF10 42782.4 3 5 1372.1 149.1 HUMAN 1 3.387 20.3827 QFDDADSSDSENRDL-p Q9BRS2;S22-p QFDDADSSDSENRDL 0.984797218832632 0.101634066156776 0.00366666666666667 -0.227333333333333 0.13501790372748 13.1156586169462 0.00366666666666667 -0.227333333333333 0.969389272998699 0.0488016086943643 0.0401815463401774 -2.5305258275791 Q9BRS2 RIOK1 Q9BRS2.S22.p_RIOK1 Q9BRS2_S21sS22s_2_2_21_22 Q9BRS2 Q9BRS2|E9PFQ8 Serine/threonine-protein kinase RIO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19196.19409.3 10.24 6.57 2.834 3 2 2 0 938.0891 2652.3153 S21s S22s TMT10 11 (R) VVPGQFDDADssDSENRDLK (T) VVPGQFDDADS(0.99)S(0.99)DS(0.0)ENRDLK K:TMT10,s:Phosphorylated S RIOK1 65924.2 2 2 5037.1 23.65 HUMAN 1 0.135 -13.1157 QFEDLVPSPTSEKAF-p Q9Y4J8-15;S602-p QFEDLVPSPTSEKAF 0.0986992178204749 0.00580592124960547 -0.325666666666667 -0.538666666666667 21.2804644913328 32.3215281362828 -0.325666666666667 -0.538666666666667 0.00744652326785544 0.000585931958479057 -4.15930074113647 -7.15823508124627 Q9Y4J8 DTNA Q9Y4J8.15.S602.p_DTNA Q9Y4J8-15_S602s _1_1_602_602 Q9Y4J8-15 Q9Y4J8|Q9Y4J8-15|Q9Y4J8-14|Q9Y4J8-2|Q9Y4J8-13|Q9Y4J8-11|Q9Y4J8-10|Q9Y4J8-6|M0QZ28|M0R0C4 Isoform 15 of Dystrobrevin alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22237.22442.3 15.44 15.44 2.995 4 1 1 0 706.0255 2036.0952 S602s TMT10 594 (R) TQFEDLVPsPTSEK (A) T(0.0)QFEDLVPS(0.99)PT(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S DTNA 83008.6 4 23 792.1 224.62 HUMAN 1 -21.2805 -32.3215 QFFKQLPSPPFLPAA-p P49716;S256-p QFFKQLPSPPFLPAA 0.62273654784064 0.493388280972719 -0.0656666666666667 0.0886666666666667 3.82257017800269 4.1012103528673 -0.0656666666666667 0.0886666666666667 0.414708543260719 0.388936735535613 -0.883058102238723 0.936265729588205 P49716 CEBPD P49716.S256.p_CEBPD P49716_S256s _1_1_256_256 P49716 P49716 CCAAT/enhancer-binding protein delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25827.25827.3 14.43 14.43 7.237 2 1 1 0 703.0125 2027.0582 S256s TMT10 253 (K) QLPsPPFLPAAGTADCR (-) QLPS(0.99)PPFLPAAGT(0.0)ADCR C:Carbamidomethylation,s:Phosphorylated S CEBPD 28637.7 2 2 5211.1 21.75 HUMAN 1 -3.8226 4.1012 QFGKRPESPSEISPI-p Q7Z5K2-2;S264-p QFGKRPESPSEISPI 0.685916225851704 0.00291707519504385 -0.095 0.949 3.07210196841454 38.2800665529357 -0.095 0.949 0.492935167504646 0.00014859128714194 -0.735019355597569 9.38403484801314 Q7Z5K2 WAPL Q7Z5K2.2.S264.p_WAPL Q7Z5K2-2_S264s _1_1_264_264 Q7Z5K2-2 Q7Z5K2-3|Q7Z5K2-2 Isoform 2 of Wings apart-like protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11641.11641.4 12.86 8.06 1.497 4 1 1 0 570.0652 2197.2705 S264s TMT10 261 (K) RPEsPSEISPIKGSVR (T) RPES(0.99)PS(0.0)EIS(0.0)PIKGS(0.0)VR K:TMT10,s:Phosphorylated S WAPL 138966.1 13 7 244.1 413.16 HUMAN 1 -3.0721 38.2801 QFGQRDRSSSAPNVH-p P15056;S363-p QFGQRDRSSSAPNVH 0.450247016764741 0.591191465367774 0.106 0.055 6.40161259599172 3.08934046332879 0.106 0.055 0.229001717955868 0.490982433013413 1.35580599521787 0.73839524288969 P15056 BRAF P15056.S363.p_BRAF P15056_S363s_1_1_363_363 P15056 P15056 Serine/threonine-protein kinase B-raf HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28628.28628.3 14.95 14.95 1.271 4 1 1 0 905.4544 2633.4096 S363s N372n TMT10 363 (R) sSSAPNVHInTIEPVNIDDLIR (D) S(0.99)S(0.0)S(0.0)APN(0.0)VHIN(0.99)T(0.0)IEPVN(0.0)IDDLIR s:Phosphorylated S,n:Deamidated BRAF 85177.1 15 19 441.1 311.96 HUMAN 1 6.4016 3.0893 QFGSRFLSDPARVFH-p Q6P1Q9;S26-p QFGSRFLSDPARVFH 0.824283520934974 0.368484710632883 0.034 -0.0856666666666666 1.61819839446499 5.74941658046483 0.034 -0.0858757050561587 0.688938032685581 0.266108251846203 0.422484951787669 -1.23950926418739 Q6P1Q9 METTL2B Q6P1Q9.S26.p_METTL2B Q6P1Q9_S26s _1_1_26_26 Q6P1Q9 Q6P1Q9|F8WAS9 Methyltransferase-like protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14866.14866.2 7.58 2.19 99 1 1 1 0 557.7788 1034.5832 S26s TMT10 24 (R) FLsDPAR (V) FLS(1.0)DPAR s:Phosphorylated S METTL2B 44167 1 1 5068.1 23.37 HUMAN 1 1.6182 -5.7494 QFHQKGRSMNSTGSG-p P28290;S153-p QFHQKGRSMNSTGSG 0.0346353934303088 0.00808186089366943 0.965666666666667 0.613333333333333 34.1313499605719 29.8046393736657 0.965666666666667 0.613333333333333 0.000386246897441859 0.00104601054472978 7.79446288017885 6.36290493893953 P28290 SSFA2 P28290.S153.p_SSFA2 P28290_S153s _1_1_153_153 P28290 P28290|P28290-3|E9PHV5 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.3882.3882.3 10.43 10.43 2.198 4 1 1 0 540.6033 1539.8313 S153s TMT10 151 (K) GRsMNSTGSGK (S) GRS(0.99)MNS(0.0)T(0.0)GS(0.0)GK K:TMT10,s:Phosphorylated S SSFA2 139638.7 1 5 73.1 652.35 HUMAN 1 34.1313 29.8046 QFHSPVGSPLKSIQA-p Q16659;S688-p QFHSPVGSPLKSIQA 0.148299935849049 0.0108785983285123 -0.296333333333333 -0.47 16.7372221076533 27.5154193453741 -0.296333333333333 -0.47 0.0211971654311536 0.0017719769386074 -3.21105608740037 -5.70231718023001 Q16659 MAPK6 Q16659.S688.p_MAPK6 Q16659_S688s _1_1_688_688 Q16659 Q16659 Mitogen-activated protein kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26840.26840.3 16.78 16.78 3.168 3 1 1 0 858.1372 2492.4277 S688s TMT10 673 (K) QLESIGIPQFHSPVGsPLK (S) QLES(0.0)IGIPQFHS(0.0)PVGS(0.99)PLK K:TMT10,s:Phosphorylated S MAPK6 83306.9 1 6 2324.1 87.84 HUMAN 1 -16.7372 -27.5154 QFKAKLASLEELKRQ-p P15924;S1078-p QFKAKLASLEELKRQ 0.0444873405743474 0.107189564584786 0.768666666666667 0.217 30.0291624244339 12.8132220435484 0.768666666666667 0.217 0.000993307598161319 0.052321211994463 6.44100120417338 2.47612910206634 P15924 DSP P15924.S1078.p_DSP P15924_S1078s _1_1_1078_1078 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20517.20517.3 9.62 3.97 99 1 1 1 0 532.9756 1516.9463 S1078s TMT10 1076 (K) LAsLEELKR (Q) LAS(1.0)LEELKR K:TMT10,s:Phosphorylated S DSP 334221.3 2 6 104.1 590.4 HUMAN 1 30.0292 12.8132 QFKASVATLMKNLQT-p O43795;T580-p QFKASVATLMKNLQT 0.86020254858192 0.00804251812163316 0.0326666666666667 0.485333333333333 1.27721311365543 29.8444098952947 0.0326666666666667 0.485333333333333 0.745210024979792 0.00103647542765148 0.342038354505704 6.37488859019271 O43795 MYO1B O43795.T580.p_MYO1B O43795_T580t _1_1_580_580 O43795 O43795|E9PDF6 Unconventional myosin-Ib HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19410.19410.2 9.34 9.34 9.339 2 1 1 0 679.8799 1278.7856 T580t TMT10 576 (K) ASVAtLMK (N) AS(0.0)VAT(0.99)LMK K:TMT10,t:Phosphorylated T MYO1B 133009.6 1 13 296.9 379.15 HUMAN 1 1.2772 29.8444 QFKDISLSDYKGKYV-p Q06830;S32-p QFKDISLSDYKGKYV 0.207985684543594 0.0192120044489922 -0.389333333333333 0.384666666666667 13.1565554004285 23.5854152008321 -0.389333333333333 0.384666666666667 0.0483442091320122 0.00437984236331958 -2.53931601469105 4.68877357511924 Q06830 PRDX1 Q06830.S32.p_PRDX1 Q06830_S32s _1_1_32_32 Q06830 Q06830 Peroxiredoxin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20710.20710.2 11.45 4.64 2.32 3 1 1 0 739.8811 1398.7881 S32s TMT10 28 (K) DISLsDYK (G) DIS(0.0)LS(0.99)DY(0.0)K K:TMT10,s:Phosphorylated S PRDX1 22338.2 2 1 4916.1 25.12 HUMAN 1 -13.1566 23.5854 QFKIKRHTPLSKLMK-p A8MU27;T37-p QFKIKRHTPLSKLMK 0.365498843349433 0.0262485247105981 0.190333333333333 -0.564 8.11266749319347 21.4878426139432 0.190333333333333 -0.564 0.154430561558345 0.00709930342894741 1.65469993545072 -4.20147413130169 A8MU27 NotFound A8MU27.T37.p_NotFound A8MU27_T37t _1_1_37_37 A8MU27 A8MU27|P55854-2|A8MUA9|P61956|P61956-2 Small ubiquitin-related modifier 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.6454.6454.4 9.69 6.05 3.074 2 1 1 0 462.536 1767.1572 T37t TMT10 33 (K) IKRHtPLSK (L) IKRHT(0.99)PLS(0.0)K K:TMT10,t:Phosphorylated T SUMO3 17127.4 4 4 3254.1 55.79 HUMAN 1 8.1127 -21.4878 QFKLQPSSSPENSLD-p Q8WWM7-3;S558-p QFKLQPSSSPENSLD 0.851695487788593 0.275390859448174 0.0313333333333333 -0.136666666666667 1.34997037938087 7.38025302290091 0.0313333333333333 -0.136666666666667 0.732829531312106 0.182799371289089 0.359498913578326 -1.52697883050742 Q8WWM7 ATXN2L Q8WWM7.3.S558.p_ATXN2L Q8WWM7-3_S558sS559s_2_2_558_559 Q8WWM7-3 Q8WWM7-3|H3BUF6|Q8WWM7-2|Q8WWM7-9|Q8WWM7-4|Q8WWM7-5|Q8WWM7-8|Q8WWM7-6 Isoform 3 of Ataxin-2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26878.26878.3 14.48 14.48 1.439 4 2 2 0 753.0103 2097.0814 S558s S559s TMT10 554 (K) LQPSssPENSLDPFPPR (I) LQPS(0.0)S(0.99)S(0.99)PENS(0.0)LDPFPPR s:Phosphorylated S ATXN2L 116093.7 3 27 184.1 476.17 HUMAN 1 1.35 -7.3803 QFLDRVRSPLKNDKD-p Q9UGU0;S1134-p QFLDRVRSPLKNDKD 0.0635370415880919 0.00693910966211418 -0.449 -0.953 25.882961573026 30.950748208489 -0.449 -0.953 0.00258049987695337 0.00080338770152739 -5.27093628028984 -6.71559661825812 Q9UGU0 TCF20 Q9UGU0.S1134.p_TCF20 Q9UGU0_S1134s _1_1_1134_1134 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7720.7720.4 11.02 5.57 99 1 1 1 0 456.7739 1744.1048 S1134s TMT10 1132 (R) VRsPLKNDK (D) VRS(1.0)PLKNDK K:TMT10,s:Phosphorylated S TCF20 213250.7 5 17 197.1 457.96 HUMAN 1 -25.883 -30.9507 QFLIHQQSGEQKKRN-p Q9ULJ7;S1352-p QFLIHQQSGEQKKRN 0.734482909449918 0.0319294148865858 0.0693333333333333 -0.288 2.53795672381673 20.1981584696049 0.0693333333333334 -0.288 0.557447956322987 0.00955397615525205 0.624895462464657 -3.91789436067729 Q9ULJ7 ANKRD50 Q9ULJ7.S1352.p_ANKRD50 Q9ULJ7_S1352s _1_1_1352_1352 Q9ULJ7 Q9ULJ7|Q9ULJ7-2 Ankyrin repeat domain-containing protein 50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11814.11814.3 13.94 11.3 13.939 2 1 1 0 775.3985 2244.2137 S1352s TMT10 1342 (R) SQQQFLIHQQsGEQK (K) S(0.0)QQQFLIHQQS(0.99)GEQK K:TMT10,s:Phosphorylated S ANKRD50 157796.3 1 6 1875.1 109.69 HUMAN 1 2.538 -20.1982 QFLNEDLS_______-p Q9BPX3;S1015-p QFLNEDLS_______ 0.924898829171159 0.0219540547523848 0.015 -0.377333333333333 0.667610070154048 22.6660590458481 0.015 -0.377333333333333 0.857509604392585 0.0054124524679815 0.188289521042025 -4.47101118271864 Q9BPX3 NCAPG Q9BPX3.S1015.p_NCAPG Q9BPX3_S1015s _1_1_1015_1015 Q9BPX3 Q9BPX3 Condensin complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30795.30795.2 21.11 21.11 21.107 2 1 1 0 1065.5659 2050.1585 S1015s TMT10 1002 (K) SKLNLAQFLNEDLs (-) S(0.0)KLNLAQFLNEDLS(0.99) K:TMT10,s:Phosphorylated S NCAPG 115416.1 8 7 1123.1 174.85 HUMAN 1 0.6676 -22.6661 QFPRGRDSEDFNVKE-p Q9BZE2;S142-p QFPRGRDSEDFNVKE 0.372507729009431 0.845376311681427 0.140666666666667 -0.064 7.95638397890599 1.02560726107446 0.140666666666667 -0.064 0.160089040662841 0.789658426087738 1.62759346098967 -0.28026176147961 Q9BZE2 PUS3 Q9BZE2.S142.p_PUS3 Q9BZE2_S142s _1_1_142_142 Q9BZE2 Q9BZE2 tRNA pseudouridine(38/39) synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22603.22603.5 19.28 19.28 19.282 3 1 1 0 757.9795 3705.8985 S142s TMT10 139 (R) GRDsEDFNVKEEANAAAEEIRYTHILNR (V) GRDS(0.99)EDFNVKEEANAAAEEIRY(0.0)T(0.0)HILNR K:TMT10,s:Phosphorylated S PUS3 56216.9 1 1 4318.1 33.71 HUMAN 1 7.9564 -1.0256 QFQGLMESMRQADLK-p Q9UPW0;S489-p QFQGLMESMRQADLK 0.856577438544059 0.365158045152598 0.029 0.111333333333333 1.30889619793789 5.80007937441347 0.029 0.111333333333333 0.739793276890126 0.263021991988895 0.349662523189976 1.24857847068722 Q9UPW0 FOXJ3 Q9UPW0.S489.p_FOXJ3 Q9UPW0_S489s _1_1_489_489 Q9UPW0 Q9UPW0|Q9UPW0-2 Forkhead box protein J3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34108.34108.5 24.81 22.91 4.856 5 1 1 0 739.5673 3613.8395 S489s TMT10 469 (R) IASSVNWSDVDLSQFQGLMEsMRQADLK (N) IAS(0.0)S(0.0)VNWS(0.0)DVDLS(0.0)QFQGLMES(0.99)MRQADLK K:TMT10,s:Phosphorylated S FOXJ3 69472.6 10 6 1390.1 147.2 HUMAN 1 1.3089 5.8001 QFRGFNKSVENLFLS-p Q4VX76;S185-p QFRGFNKSVENLFLS 0.479207718540911 0.00719792492613561 -0.245333333333333 0.466333333333333 5.8792927501234 30.6610069179042 -0.245333333333333 0.466333333333333 0.258268074673014 0.000858814381090798 -1.26303061092927 6.62497791305976 Q4VX76 SYTL3 Q4VX76.S185.p_SYTL3 Q4VX76_S185s _1_1_185_185 Q4VX76 Q4VX76 Synaptotagmin-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.34955.34955.3 22.26 18.15 6.531 3 1 1 0 699.3906 2016.1894 S185s TMT10 185 (K) sVENLFLSLATHVK (K) S(0.99)VENLFLS(0.0)LAT(0.0)HVK K:TMT10,s:Phosphorylated S SYTL3 69756.5 3 2 1933.1 106.31 HUMAN 1 -5.8793 30.661 QFRQASDTEEDDITD-p Q6ZU65;T252-p QFRQASDTEEDDITD 0.443781954147912 0.0520896383681692 0.101666666666667 0.234666666666667 6.50189328964118 17.123554612213 0.101666666666667 0.234666666666667 0.223774538963232 0.0193929795181506 1.37350842874443 3.28448416920986 Q6ZU65 UBN2 Q6ZU65.T252.p_UBN2 Q6ZU65_S250sT252t_2_2_250_252 Q6ZU65 Q6ZU65|Q6ZU65-2 Ubinuclein-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11524.11524.2 12.91 12.91 7.436 3 2 2 0 1163.9927 2167.0403 S250s T252t TMT10 248 (R) QAsDtEEDDITDNQK (H) QAS(0.99)DT(0.99)EEDDIT(0.0)DNQK K:TMT10,s:Phosphorylated S,t:Phosphorylated T UBN2 146713.5 6 9 1034.1 185.79 HUMAN 1 6.5019 17.1236 QFRQASESEDDFIKE-p Q9NPG3;S175-p QFRQASESEDDFIKE 0.225563990023236 0.154395245209893 -0.282 0.147 12.4183447878181 10.6691339167032 -0.282 0.147 0.0573014380447677 0.0857208775373581 -2.4067647513432 2.09732740817609 Q9NPG3 UBN1 Q9NPG3.S175.p_UBN1 Q9NPG3_S173sS175s_2_2_173_175 Q9NPG3 Q9NPG3|Q9NPG3-2 Ubinuclein-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19510.19510.2 7.77 7.77 99 2 2 2 0 943.916 1726.89 S173s S175s TMT10 171 (R) QAsEsEDDFIK (E) QAS(1.0)ES(1.0)EDDFIK K:TMT10,s:Phosphorylated S UBN1 122088.8 4 10 1087.1 179.43 HUMAN 1 -12.4183 10.6691 QFTKDQMSHLFNVAH-p P27708;S1938-p QFTKDQMSHLFNVAH 0.270199965582108 0.857303744462759 -0.176 0.0216666666666667 10.7706495798492 0.943003844873653 -0.176 0.0216666666666667 0.0837404021161592 0.804821585067665 -2.11597582200306 0.259494429319683 P27708 CAD P27708.S1938.p_CAD P27708_S1938s _1_1_1938_1938 P27708 P27708|F8VPD4 CAD protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20418.20418.3 14.84 9.95 10.867 2 1 1 0 659.9915 1897.9904 S1938s TMT10 1935 (K) DQMsHLFNVAHTLR (M) DQMS(0.99)HLFNVAHT(0.0)LR s:Phosphorylated S CAD 245318.5 1 7 628.1 257.21 HUMAN 1 -10.7706 0.943 QGADREESPMTGVCV-p Q13627;S748-p QGADREESPMTGVCV 0.10503732738293 0.70441305590419 0.42 -0.0396666666666666 20.6024521594037 2.09017092382311 0.42 -0.0396666666666667 0.0087047195609765 0.6179920775528 4.00945263430599 -0.528617308679634 Q13627 DYRK1A Q13627.S748.p_DYRK1A Q13627_S748s _1_1_748_748 Q13627 Q13627|Q13627-2 Dual specificity tyrosine-phosphorylation-regulated kinase 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13778.13778.3 14.01 14.01 1.377 5 1 1 0 910.4089 2649.2446 S748s TMT10 741 (R) QGADREEsPMTGVCVQQSPVASS (-) QGADREES(0.99)PMT(0.0)GVCVQQS(0.0)PVAS(0.0)S(0.0) C:Carbamidomethylation,s:Phosphorylated S DYRK1A 86095.8 1 4 2424.1 84.13 HUMAN 1 20.6025 -2.0902 QGAEGAPSPNYDDDD-p P22681;S452-p QGAEGAPSPNYDDDD 0.906665267605411 0.936095604749919 -0.0176666666666667 0.00866666666666669 0.835085148980508 0.405152616511454 -0.0176666666666667 0.00866666666666668 0.825071308743337 0.910929440503865 -0.231983841706525 0.117188324682278 P22681 CBL P22681.S452.p_CBL P22681_S452s _1_1_452_452 P22681 P22681|A0A0U1RQX8|A0A0U1RR39 E3 ubiquitin-protein ligase CBL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23262.23262.3 21.27 21.27 3.939 3 1 1 0 1181.1766 3461.5514 S452s TMT10 445 (R) QGAEGAPsPNYDDDDDERADDTLFMMK (E) Q(0.0)GAEGAPS(0.99)PN(0.0)Y(0.0)DDDDDERADDT(0.0)LFM(0.0)M(0.0)K K:TMT10,s:Phosphorylated S CBL 100943.3 4 3 741.1 234.1 HUMAN 1 -0.8351 0.4052 QGAKYRGSIHDFPGF-p P08133;S13-p QGAKYRGSIHDFPGF 0.495901315517715 0.220295201112098 -0.0983333333333334 0.144 5.60815781394965 8.64952646132155 -0.0983333333333333 0.144 0.274905999938059 0.13647319338111 -1.21443134769923 1.74709292330452 P08133 ANXA6 P08133.S13.p_ANXA6 P08133_S13s _1_1_13_13 P08133 P08133|E5RK69|E7EMC6|E5RI05|E5RIU8 Annexin A6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27738.27738.4 21.69 22.72 5.837 4 1 1 0 846.1573 3301.6352 S13s TMT10 10 (K) YRGsIHDFPGFDPNQDAEALYTAMK (G) Y(0.0)RGS(0.99)IHDFPGFDPNQDAEALY(0.0)T(0.0)AMK K:TMT10,s:Phosphorylated S ANXA6 76214.3 3 1 1878.1 109.53 HUMAN 1 -5.6082 8.6495 QGAQCVHSPRFPAQY-p Q15477;S1017-p QGAQCVHSPRFPAQY 0.386906109244301 0.0985793174091071 0.347 -0.274666666666667 7.63275557286249 13.3008463640365 0.347 -0.274666666666667 0.172474320535373 0.0467643996765056 1.57138080845039 -2.56397593958913 Q15477 SKIV2L Q15477.S1017.p_SKIV2L Q15477_S1017s _1_1_1017_1017 Q15477 Q15477 Helicase SKI2W HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18943.18943.4 19.4 19.4 99 1 1 1 0 601.5712 2323.2957 S1017s TMT10 1004 (R) KLEELIQGAQCVHsPR (F) KLEELIQGAQCVHS(1.0)PR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SKIV2L 138722.7 1 4 2186.1 94.08 HUMAN 1 7.6328 -13.3008 QGASEDNSGGGGKKP-p Q7Z5J4;S1492-p QGASEDNSGGGGKKP 0.343220967919608 0.0206226223225813 0.157666666666667 -0.438333333333333 8.62411658107767 23.0649743509951 0.157666666666667 -0.438333333333333 0.13727401681718 0.00493744834249491 1.74329588785762 -4.56467304439886 Q7Z5J4 RAI1 Q7Z5J4.S1492.p_RAI1 Q7Z5J4_S1492s _1_1_1492_1492 Q7Z5J4 Q7Z5J4|Q7Z5J4-2|A0A1W2PQJ7|Q7Z5J4-3 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5958.5958.4 13.83 13.83 1.261 4 1 1 0 708.1289 2749.525 S1492s TMT10 1481 (R) ASGTQGASEDNsGGGGKKPK (M) AS(0.0)GT(0.0)QGAS(0.0)EDNS(0.99)GGGGKKPK K:TMT10,s:Phosphorylated S RAI1 206315.3 2 23 142.1 522.21 HUMAN 1 8.6241 -23.065 QGCSREASPSRLSVA-p E3W994;S507-p QGCSREASPSRLSVA 0.94478758147709 0.00784647848245682 0.018 0.527666666666667 0.486974353379591 30.0325615499511 0.018 0.527666666666667 0.893928049423868 0.000992530462742546 0.139728534248957 6.43182718320083 E3W994 NotFound E3W994.S507.p_NotFound E3W994_S507s _1_1_507_507 E3W994 O75122-3|E7EW49|E7ERI8|A0A0U1RQI6|J3KR49|E3W994 CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5199.5199.3 9.62 7.38 9.624 3 1 1 0 418.2067 1172.6382 S507s Hydrogen 505 (R) EAsPSRLSVAR (S) EAS(0.99)PS(0.0)RLS(0.0)VAR s:Phosphorylated S CLASP2 139660.6 3 11 158.1 498.15 HUMAN 1 0.487 30.0326 QGDAIQLSPKLQALA-p Q5VV41;S174-p QGDAIQLSPKLQALA 0.200655579876407 0.932415080974757 0.256 0.0223333333333334 13.5622051032904 0.428209243486846 0.256 0.0223333333333334 0.0440331231286328 0.906106144901642 2.61288394660777 0.123571574418653 Q5VV41 ARHGEF16 Q5VV41.S174.p_ARHGEF16 Q5VV41_S174s _1_1_174_174 Q5VV41 Q5VV41 Rho guanine nucleotide exchange factor 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20882.20882.5 30.22 30.22 18.016 3 1 1 0 790.4318 3868.1648 S174s TMT10 160 (K) GLGKPGGQGDAIQLsPKLQALAEEPSQPHTR (S) GLGKPGGQGDAIQLS(0.99)PKLQALAEEPS(0.0)QPHT(0.0)R K:TMT10,s:Phosphorylated S ARHGEF16 80388.8 3 6 597.1 263.65 HUMAN 1 13.5622 0.4282 QGDGNEDSPGQGEQA-p Q8NFG4;S38-p QGDGNEDSPGQGEQA 0.610225105291086 0.591145403447784 0.0743333333333333 -0.0536666666666667 3.97468150997699 3.08989648292278 0.0743333333333333 -0.0536666666666667 0.400434833157474 0.490919577418974 0.912286865193204 -0.738507433792883 Q8NFG4 FLCN Q8NFG4.S38.p_FLCN Q8NFG4_S38s _1_1_38_38 Q8NFG4 Q8NFG4|Q8NFG4-2|Q8NFG4-3 Folliculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25229.25229.4 35.75 35.75 17.46 4 1 1 0 1159.7648 4556.0779 S38s TMT10 18 (R) TLFCTEVLHAPLPQGDGNEDsPGQGEQAEEEEGGIQMNSR (M) T(0.0)LFCT(0.0)EVLHAPLPQGDGNEDS(0.99)PGQGEQAEEEEGGIQMNS(0.0)R C:Carbamidomethylation,s:Phosphorylated S FLCN 65442.1 4 1 1292.1 157.11 HUMAN 1 3.9747 -3.0899 QGDGPEGSGRACSTV-p Q96RL1;S597-p QGDGPEGSGRACSTV 0.890988784685547 0.0957783118135617 0.0313333333333333 -0.467333333333333 0.98043193617968 13.4719792284997 0.0313333333333333 -0.467333333333333 0.797915325072278 0.0449574921530302 0.268962756418616 -2.59498703596443 Q96RL1 UIMC1 Q96RL1.S597.p_UIMC1 Q96RL1_S597s _1_1_597_597 Q96RL1 Q96RL1|Q96RL1-3|Q96RL1-2|Q96RL1-4 BRCA1-A complex subunit RAP80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3143.3143.2 8.1 5 99 1 1 1 0 727.8096 1374.6447 S597s TMT10 588 (K) ADQGDGPEGsGR (A) ADQGDGPEGS(1.0)GR s:Phosphorylated S UIMC1 80924.2 1 14 339.1 354.34 HUMAN 1 0.9804 -13.472 QGDLGCGSPPHRPPA-p Q8N573-2;S52-p QGDLGCGSPPHRPPA 0.853856477511624 0.0857344397549443 0.0316666666666667 -0.363 1.33032090744229 14.1191054853048 0.0316666666666667 -0.363 0.736152699933151 0.0387337416446658 0.354799933811019 -2.71316838132443 Q8N573 OXR1 Q8N573.2.S52.p_OXR1 Q8N573-2_S52s _1_1_52_52 Q8N573-2 Q8N573-2 Isoform 2 of Oxidation resistance protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16403.16403.5 16.25 9.8 4.48 5 1 1 0 949.271 4662.3614 S52s TMT10 36 (R) FEDYLREPAQGDLGCGsPPHRPPAPSSPEGPDTGQKK (T) FEDY(0.0)LREPAQGDLGCGS(0.99)PPHRPPAPS(0.0)S(0.0)PEGPDT(0.0)GQKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S OXR1 94303 2 1 1415.1 144.6 HUMAN 1 1.3303 -14.1191 QGDLNPESPAALGQD-p Q92766;S1653-p QGDLNPESPAALGQD 0.72251740159762 0.126107358515161 -0.049 0.165333333333333 2.67156701138467 11.8580374359137 -0.049 0.165333333333333 0.540559244407554 0.0651922929574816 -0.652876201860934 2.30604480519963 Q92766 RREB1 Q92766.S1653.p_RREB1 Q92766_S1653s _1_1_1653_1653 Q92766 Q92766-2|Q92766-3|Q92766-5|A0A087X055|Q92766-4 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.31445.31445.5 19.66 19.66 1.321 3 1 1 0 682.9374 3330.6804 S1653s TMT10 1636 (K) VTAGWPSEPGQGDLNPEsPAALGQDLLEPR (S) VT(0.0)AGWPS(0.0)EPGQGDLNPES(0.99)PAALGQDLLEPR s:Phosphorylated S RREB1 184269.8 6 29 179.1 480.48 HUMAN 1 -2.6716 11.858 QGEAEEDSQGKEGPS-p Q12789;S739-p QGEAEEDSQGKEGPS 0.108085133456159 0.00297589273654222 0.308 0.706 20.320990962668 38.0589672635645 0.308 0.706 0.00928754441653152 0.000156351939764746 3.94817963798008 9.29167204672808 Q12789 GTF3C1 Q12789.S739.p_GTF3C1 Q12789_S739s _1_1_739_739 Q12789 Q12789|Q12789-3 General transcription factor 3C polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10729.10868.3 18.48 14.72 3.494 9 1 1 0 1308.9442 3844.8473 S739s TMT10 725 (K) TSQPPVPQGEAEEDsQGKEGPSGSGDSQLSASSR (S) T(0.0)S(0.0)QPPVPQGEAEEDS(0.99)QGKEGPS(0.0)GS(0.0)GDS(0.0)QLS(0.0)AS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S GTF3C1 241209.8 3 3 225.1 425.73 HUMAN 1 20.321 38.059 QGEAREGSPRDNPTA-p Q08379;S953-p QGEAREGSPRDNPTA 0.955933195191128 0.0456921667392721 0.00966666666666666 -0.384 0.382534531541861 17.9320582693184 0.00966666666666666 -0.384 0.915685942171694 0.0160988247626734 0.110909239295441 -3.44572073395239 Q08379 GOLGA2 Q08379.S953.p_GOLGA2 Q08379_S953s _1_1_953_953 Q08379 Q08379|Q08379-2|A0A087WYC0 Golgin subfamily A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26112.26112.4 17.16 17.16 1.789 2 1 1 0 591.5489 2283.2077 S953s TMT10 951 (R) EGsPRDNPTAQQIMQLLR (E) EGS(0.99)PRDNPT(0.0)AQQIMQLLR s:Phosphorylated S GOLGA2 113711.9 7 10 458.1 306.2 HUMAN 1 0.3825 -17.9321 QGEGKPASQAKPESQ-p Q969E4;S86-p QGEGKPASQAKPESQ 0.981612148640369 0.0576489156616944 0.00499999999999999 0.228333333333333 0.159690101528679 16.5076169527034 0.00500000000000001 0.228333333333333 0.963897801794194 0.0223479815801192 0.0473959031856703 3.16395096533627 Q969E4 TCEAL3 Q969E4.S86.p_TCEAL3 Q969E4_S86s _1_1_86_86 Q969E4 Q969E4 Transcription elongation factor A protein-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5826.5826.5 9.05 9.05 2.143 3 1 1 0 695.9733 3395.8689 S86s TMT10 72 (R) SEGEGKPQGEGKPAsQAKPESQPR (A) S(0.0)EGEGKPQGEGKPAS(0.99)QAKPES(0.0)QPR K:TMT10,s:Phosphorylated S TCEAL3 22616 1 3 943.1 197.95 HUMAN 1 0.1597 16.5076 QGEVDMESHRNANAE-p P14209;S168-p QGEVDMESHRNANAE 0.363780013845679 0.208448492321714 0.219 -0.152333333333333 8.15071072935329 8.95928960128423 0.219 -0.152333333333333 0.153083691745229 0.127078195681085 1.66129522318902 -1.80067102502929 P14209 CD99 P14209.S168.p_CD99 P14209_S168s _1_1_168_168 P14209 P14209|P14209-3 CD99 antigen HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6705.6705.4 24.59 24.59 99 1 1 1 0 748.3386 2910.3598 S168s TMT10 157 (K) ENAEQGEVDMEsHRNANAEPAVQR (T) ENAEQGEVDMES(1.0)HRNANAEPAVQR s:Phosphorylated S CD99 18904.6 3 1 3847.1 41.75 HUMAN 1 8.1507 -8.9593 QGFVPAAYVKKLDPA-p A0A0D9SGF6;Y1020-p QGFVPAAYVKKLDPA 0.538800686374925 0.143082916533283 0.089 0.174 4.96266203659296 11.1257642353393 0.089 0.174 0.318958218041289 0.0771655714076661 1.09721125045182 2.17716241773018 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.Y1020.p_SPTAN1 A0A0D9SGF6_Y1020y _1_1_1020_1020 A0A0D9SGF6 A0A0D9SGF6|Q13813-2|A0A0D9SF54|Q13813-3 Spectrin alpha chain, non-erythrocytic 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.21949.21949.2 14.67 14.67 99 1 1 1 0 809.4429 1537.9143 Y1020y TMT10 1013 (R) QGFVPAAyVK (K) QGFVPAAY(1.0)VK K:TMT10,y:Phosphorylated Y SPTAN1 288398.5 1 1 246.1 14.67 HUMAN 1 4.9627 11.1258 QGGERGLSGPSGPGH-p Q14151;S886-p QGGERGLSGPSGPGH 0.246863210495205 0.30957701882735 0.259 -0.105 11.6179554413161 6.73115200385671 0.259 -0.105 0.0688976574355635 0.212268132764552 2.26474801955486 -1.41349017208936 Q14151 SAFB2 Q14151.S886.p_SAFB2 Q14151_S886s _1_1_886_886 Q14151 Q14151 Scaffold attachment factor B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7321.7321.3 13.13 13.13 1.464 3 1 1 0 540.5915 1539.7899 S886s TMT10 884 (R) GLsGPSGPGHMASR (G) GLS(0.99)GPS(0.0)GPGHMAS(0.0)R s:Phosphorylated S SAFB2 107985.1 1 12 83.3 629.62 HUMAN 1 11.618 -6.7312 QGGSPAPSPAGCGGK-p Q68DK7;S70-p QGGSPAPSPAGCGGK 0.478270607126848 0.685307877390468 -0.0963333333333333 0.0476666666666667 5.89416946309588 2.24703687385171 -0.0963333333333334 0.0476666666666667 0.257384893557404 0.596068693556152 -1.26568774254984 0.562772382153152 Q68DK7 MSL1 Q68DK7.S70.p_MSL1 Q68DK7_S66sS70s_2_2_66_70 Q68DK7 Q68DK7|J3KSZ8|J3QQY0 Male-specific lethal 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18192.18192.5 13.59 13.59 2.354 4 2 2 0 651.1279 3091.6813 S66s S70s TMT10 52 (K) LKEPGPPLASSQGGsPAPsPAGCGGK (G) LKEPGPPLAS(0.0)S(0.0)QGGS(0.99)PAPS(0.99)PAGCGGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MSL1 67811.9 2 16 324.1 362.01 HUMAN 1 -5.8942 2.247 QGGVPAGSDEYEDEC-p Q9BVS4;S442-p QGGVPAGSDEYEDEC 0.771638354290043 0.936382387574165 0.042 0.00900000000000001 2.15540684525352 0.40329878343857 0.042 0.00900000000000001 0.608778512973656 0.911318363612001 0.542949426099309 0.116673865525171 Q9BVS4 RIOK2 Q9BVS4.S442.p_RIOK2 Q9BVS4_S442s _1_1_442_442 Q9BVS4 Q9BVS4|Q9BVS4-2 Serine/threonine-protein kinase RIO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22915.22915.3 22.92 22.92 2.907 4 1 1 0 1074.8441 3142.5313 S442s TMT10 434 (R) VQGGVPAGsDEYEDECPHLIALSSLNR (E) VQGGVPAGS(0.99)DEY(0.0)EDECPHLIALS(0.0)S(0.0)LNR C:Carbamidomethylation,s:Phosphorylated S RIOK2 63738.3 1 4 1652.1 123.35 HUMAN 1 2.1554 0.4033 QGGYDRYSGGNYRDN-p P98179;S147-p QGGYDRYSGGNYRDN 0.0395731079578075 0.00455061128120994 -0.694 -0.780666666666667 31.3792666694619 34.3196581971408 -0.694 -0.780666666666667 0.000727902704605751 0.000369857287519144 -6.86299492282848 -7.84708447063124 P98179 RBM3 P98179.S147.p_RBM3 P98179_S147s _1_1_147_147 P98179 P98179 RNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7221.7221.3 11.09 8.53 10.032 5 1 1 0 846.3482 2457.0653 S147s TMT10 139 (R) NQGGYDRYsGGNYRDNYDN (-) NQGGY(0.0)DRY(0.0)S(0.99)GGNY(0.0)RDNY(0.0)DN s:Phosphorylated S RBM3 17170.1 2 3 4635.1 28.57 HUMAN 1 -31.3793 -34.3197 QGGYGGSSSSSSYGS-p P09651-2;S309-p QGGYGGSSSSSSYGS 0.0576036189507777 0.566572236021715 0.424333333333333 -0.0546666666666667 27.0576736815874 3.32793784346103 0.424333333333333 -0.0546666666666667 0.00196894067943872 0.46473589296217 5.58451983447187 -0.786150750410246 P09651 HNRNPA1 P09651.2.S309.p_HNRNPA1 P09651-2_S309s _1_1_309_309 P09651-2 P09651|P09651-2|F8W6I7|P09651-3 Isoform A1-A of Heterogeneous nuclear ribonucleoprotein A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5019.5019.3 17.3 17.3 1.103 9 1 1 0 668.6152 1923.863 S309s TMT10 301 (R) NQGGYGGSsSSSSYGSGR (R) NQGGY(0.0)GGS(0.0)S(0.99)S(0.0)S(0.0)S(0.0)S(0.0)Y(0.0)GS(0.0)GR s:Phosphorylated S HNRNPA1 34309.7 5 12 504.1 289.99 HUMAN 1 27.0577 -3.3279 QGHGRDLSAAGIGLL-p A8MXP9;S22-p QGHGRDLSAAGIGLL 0.467527638063843 0.0523129471927482 -0.246666666666667 0.263 6.09854450043994 17.0995714009275 -0.246666666666667 0.263 0.245553172754736 0.0195003703665519 -1.30209949830687 3.27975457653197 A8MXP9 NotFound A8MXP9.S22.p_NotFound A8MXP9_S22s _1_1_22_22 A8MXP9 A8MXP9|P43243|D6REM6|D6RCM3 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.37238.37238.3 33.31 32.45 18.75 5 1 1 0 894.1362 2600.4279 S22s TMT10 20 (R) DLsAAGIGLLAAATQSLSMPASLGR (M) DLS(0.99)AAGIGLLAAAT(0.0)QS(0.0)LS(0.0)MPAS(0.0)LGR s:Phosphorylated S MATR3 100478.9 2 4 92.1 615.57 HUMAN 1 -6.0985 17.0996 QGHNSPDSPVTSAAK-p Q86XP3;S754-p QGHNSPDSPVTSAAK 0.51636083436218 0.804326179177927 0.107666666666667 -0.0296666666666667 5.30001739578778 1.32380747648073 0.107666666666667 -0.0296666666666667 0.295119740553839 0.73725759014054 1.1587646597359 -0.353203139280414 Q86XP3 DDX42 Q86XP3.S754.p_DDX42 Q86XP3_S754s _1_1_754_754 Q86XP3 Q86XP3|Q86XP3-2 ATP-dependent RNA helicase DDX42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16805.16805.4 29.97 29.97 2.878 13 1 1 0 1088.5195 4271.0965 S754s TMT10 721 (K) AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDsPVTSAAK (G) AGS(0.0)S(0.0)AAGAS(0.0)GWT(0.0)S(0.0)AGS(0.0)LNS(0.0)VPT(0.0)NS(0.0)AQQGHNS(0.0)PDS(0.99)PVT(0.0)S(0.0)AAK K:TMT10,s:Phosphorylated S DDX42 103258.6 1 7 914.1 200.89 HUMAN 1 5.3 -1.3238 QGIGEPQSPSRRVFN-p Q96C19;S74-p QGIGEPQSPSRRVFN 0.916114875747744 0.0138811738705875 0.0206666666666667 -0.398333333333333 0.743511722340339 25.7801334307497 0.0206666666666667 -0.398333333333333 0.842653109575847 0.00264232757435045 0.208242866874503 -5.23730879227161 Q96C19 EFHD2 Q96C19.S74.p_EFHD2 Q96C19_S74s _1_1_74_74 Q96C19 Q96C19 EF-hand domain-containing protein D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6014.6014.3 17.56 17.56 2.175 2 1 1 0 730.704 2110.1315 S74s TMT10 62 (R) RADLNQGIGEPQsPSRR (V) RADLNQGIGEPQS(0.99)PS(0.0)RR s:Phosphorylated S EFHD2 26810.9 11 2 2586.1 77.52 HUMAN 1 0.7435 -25.7801 QGKEAYPTPTKDLHQ-p Q9BZF1;T54-p QGKEAYPTPTKDLHQ 0.502031518920472 0.00385203903768179 -0.138 -0.63 5.518819081407 35.7223863458215 -0.138 -0.63 0.280619658552568 0.000267769658934744 -1.19834221758978 -8.36398819245857 Q9BZF1 OSBPL8 Q9BZF1.T54.p_OSBPL8 Q9BZF1_T54t _1_1_54_54 Q9BZF1 Q9BZF1|Q9BZF1-2|Q9BZF1-3 Oxysterol-binding protein-related protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10022.10022.3 9.76 9.76 2.446 3 1 1 0 482.2554 1364.7826 T54t TMT10 50 (K) EAYPtPTK (D) EAY(0.0)PT(0.99)PT(0.0)K K:TMT10,t:Phosphorylated T OSBPL8 101821.3 4 3 1293.1 156.92 HUMAN 1 -5.5188 -35.7224 QGKKAEGSPSEGKKA-p Q9P2E9;S573-p QGKKAEGSPSEGKKA 0.143638422086766 0.00156125241407917 0.351333333333333 1.01766666666667 17.2046589334356 45.142368511286 0.351333333333333 1.01766666666667 0.0190341771372131 3.06029398634099e-05 3.30305344624615 12.7050805855683 Q9P2E9 RRBP1 Q9P2E9.S573.p_RRBP1 Q9P2E9_S573s _1_1_573_573 Q9P2E9 Q9P2E9|A0A0A0MRV0|Q9P2E9-2|A0A087WVV2 Ribosome-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5243.5243.3 12.56 3.88 2.315 2 1 1 0 586.3203 1676.9786 S573s TMT10 569 (K) KAEGsPSEGK (K) KAEGS(0.99)PS(0.0)EGK K:TMT10,s:Phosphorylated S RRBP1 152868.9 6 10 479.1 299.08 HUMAN 1 17.2047 45.1424 QGKKAERSPNQGKKG-p Q9P2E9;S533-p QGKKAERSPNQGKKG 0.11362075282554 0.00171039759294762 0.446666666666667 0.955666666666667 19.7078151177284 43.9340235185566 0.446666666666667 0.955666666666667 0.0106959284293041 4.04201246183254e-05 3.8165230474192 12.0506694756465 Q9P2E9 RRBP1 Q9P2E9.S533.p_RRBP1 Q9P2E9_S533s _1_1_533_533 Q9P2E9 Q9P2E9|A0A0A0MRV0|Q9P2E9-2 Ribosome-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3458.3458.3 9.18 2.98 99 1 1 1 0 508.9362 1444.8272 S533s TMT10 530 (K) AERsPNQGK (K) AERS(1.0)PNQGK K:TMT10,s:Phosphorylated S RRBP1 152868.9 2 8 479.1 299.08 HUMAN 1 19.7078 43.934 QGKKTEGTPNQGKKA-p Q9P2E9;T235-p QGKKTEGTPNQGKKA 0.149015214516886 0.336107286565258 0.261 0.119 16.68232239457 6.27400199362098 0.261 0.119 0.0214668222643749 0.235830407070218 3.20032466249164 1.33290074671622 Q9P2E9 RRBP1 Q9P2E9.T235.p_RRBP1 Q9P2E9_T235t _1_1_235_235 Q9P2E9 Q9P2E9|A0A0A0MRV0|Q9P2E9-2|A0A087WVV2 Ribosome-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5451.5451.3 11.97 7.18 2.469 2 1 1 0 609.6708 1747.0317 T235t TMT10 231 (K) KTEGtPNQGK (K) KT(0.0)EGT(0.99)PNQGK K:TMT10,t:Phosphorylated T RRBP1 152868.9 2 6 479.1 299.08 HUMAN 1 16.6823 6.274 QGKPIELTPLPLLKD-p Q16537;T46-p QGKPIELTPLPLLKD 0.388754166810574 0.29474471968201 0.125333333333333 0.123333333333333 7.59076102893992 7.00436298600022 0.125333333333333 0.123333333333333 0.174150167741083 0.199325885173443 1.56407687435039 1.46137291307942 Q16537 PPP2R5E Q16537.T46.p_PPP2R5E Q16537_T46t _1_1_46_46 Q16537 Q16537|Q16537-2 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27681.27681.3 9.71 9.71 9.714 2 1 1 0 801.1534 2321.4775 T46t TMT10 38 (R) SQGKPIELtPLPLLK (D) S(0.0)QGKPIELT(0.99)PLPLLK K:TMT10,t:Phosphorylated T PPP2R5E 55097.8 1 4 1890.1 108.78 HUMAN 1 7.5908 7.0044 QGLAETASPVAVSLR-p E7ETA6;S861-p QGLAETASPVAVSLR 0.580696903379839 0.143341182728233 0.0763333333333333 -0.149666666666667 4.34226057463879 11.1131622222565 0.0763333333333333 -0.149666666666667 0.367937406281825 0.0773898095280082 0.982013320731941 -2.17495413396441 E7ETA6 PCM1 E7ETA6.S861.p_PCM1 E7ETA6_S861s _1_1_861_861 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14189.14189.4 20.32 14.21 2.569 7 1 1 0 881.6882 3443.7499 S861s TMT10 853 (R) RQGLAETAsPVAVSLRSDGSENLCTPQQSR (T) RQGLAET(0.0)AS(0.99)PVAVS(0.0)LRS(0.0)DGS(0.0)ENLCT(0.0)PQQS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PCM1 229381.8 8 25 13.1 1159.95 HUMAN 1 4.3423 -11.1132 QGLAVYASPENKKLF-p Q9BYD2;S133-p QGLAVYASPENKKLF 0.94685298082238 0.0172904894418937 -0.0163333333333333 -0.410666666666667 0.46915517070145 24.3128987216129 -0.0163333333333333 -0.410666666666667 0.897603387528939 0.00370433391513873 -0.134851529017413 -4.86597683490227 Q9BYD2 MRPL9 Q9BYD2.S133.p_MRPL9 Q9BYD2_S133s _1_1_133_133 Q9BYD2 Q9BYD2|Q5SZR1 39S ribosomal protein L9, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24654.24654.4 13.81 13.81 3.284 2 1 1 0 624.6115 2415.4578 S133s TMT10 123 (R) LLPQGLAVYAsPENKK (L) LLPQGLAVY(0.0)AS(0.99)PENKK K:TMT10,s:Phosphorylated S MRPL9 30413.9 1 2 4269.1 34.45 HUMAN 1 -0.4692 -24.3129 QGLEKKVSPDPQKSS-p Q8TF72;S1656-p QGLEKKVSPDPQKSS 0.421053324853859 0.930431025891797 0.252333333333333 -0.0123333333333333 6.92035928762795 0.441740069540817 0.252333333333333 -0.0123333333333333 0.203218888295936 0.903287484789373 1.44706520068018 -0.127304583177289 Q8TF72 SHROOM3 Q8TF72.S1656.p_SHROOM3 Q8TF72_S1656s _1_1_1656_1656 Q8TF72 Q8TF72 Protein Shroom3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7641.7641.3 7.07 3.95 99 1 1 1 0 555.9893 1585.9881 S1656s TMT10 1654 (K) KVsPDPQK (S) KVS(1.0)PDPQK K:TMT10,s:Phosphorylated S SHROOM3 218451.1 1 50 90.2 622.62 HUMAN 1 6.9204 -0.4417 QGLMRTASELLLDRR-p Q92508;S1646-p QGLMRTASELLLDRR 0.442356500519746 0.972900041531255 0.175333333333333 -0.00366666666666663 6.52591200762206 0.167940873657489 0.175333333333333 -0.00366666666666663 0.222540366647958 0.962068317025581 1.37774376765772 -0.0497954415149313 Q92508 PIEZO1 Q92508.S1646.p_PIEZO1 Q92508_S1646s _1_1_1646_1646 Q92508 Q92508 Piezo-type mechanosensitive ion channel component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19908.19908.2 13.4 7.05 2.507 2 1 1 0 663.849 1246.7204 S1646s TMT10 1644 (R) TAsELLLDR (R) T(0.0)AS(0.99)ELLLDR s:Phosphorylated S PIEZO1 290036.4 3 5 1703.1 120.26 HUMAN 1 6.5259 -0.1679 QGLPVPGSPGGQKWV-p J3KQR7;S656-p QGLPVPGSPGGQKWV 0.134796267289591 0.00657816383790014 -0.257333333333333 -0.599333333333333 17.8483772743324 31.3660799576406 -0.257333333333333 -0.599333333333333 0.0164120288818802 0.000730116232705467 -3.43164456389726 -6.84725771108292 J3KQR7 NotFound J3KQR7.S656.p_NotFound J3KQR7_S656s _1_1_656_656 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28663.28663.5 24.84 21.19 24.835 2 1 1 0 776.4103 3798.0525 S656s TMT10 629 (R) MALLQEFASRPLGAAPQAEHQGLPVPGsPGGQK (W) MALLQEFAS(0.0)RPLGAAPQAEHQGLPVPGS(0.99)PGGQK K:TMT10,s:Phosphorylated S CEP170B 172326.6 4 13 51.1 746.11 HUMAN 1 -17.8484 -31.3661 QGMLNSPTICQTFVG-p P63128;T1093-p QGMLNSPTICQTFVG 0.411382195733206 0.188277658963683 0.141333333333333 0.183 7.1174015225912 9.53847470297863 0.141333333333333 0.183 0.19420474988864 0.111212225006672 1.48154848752632 1.90089771285857 P63128 NotFound P63128.T1093.p_NotFound P63128_S1091sT1093tT1097t_3_3_1091_1097 P63128 P63128 Endogenous retrovirus group K member 9 Pol protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.37619.37619.4 8.83 2.15 99 3 3 3 0 1072.554 4031.2694 M1088m S1091s T1093t T1097t TMT10 1079 (R) FQWKVLPQGmLNsPtICQtFVGRALQPVK (V) FQWKVLPQGM(1.0)LNS(1.0)PT(1.0)ICQT(1.0)FVGRALQPVK K:TMT10,C:Carbamidomethylation,m:Oxidized methionine,s:Phosphorylated S,t:Phosphorylated T ERVK-9 124759.1 2 1 6891.1 8.83 HUMAN 1 7.1174 9.5385 QGMSMRESPVSAPLE-p O75376-2;S1279-p QGMSMRESPVSAPLE 0.304697362971855 0.0722865511361214 0.182333333333333 0.243 9.67093738491411 15.1615450012661 0.182333333333333 0.243 0.107871386657979 0.030468108947798 1.9245933922541 2.90688237000723 O75376 NCOR1 O75376.2.S1279.p_NCOR1 O75376-2_S1279s _1_1_1279_1279 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23908.23908.3 14.03 8.89 1.462 3 1 1 0 843.0733 2447.2406 S1279s TMT10 1272 (K) QGMSMREsPVSAPLEGLICR (A) QGMS(0.0)MRES(0.99)PVS(0.0)APLEGLICR C:Carbamidomethylation,s:Phosphorylated S NCOR1 259453.1 3 9 35.1 889.74 HUMAN 1 9.6709 15.1615 QGNSNRRSVSTLKPC-p A0A286YFF8;S205-p QGNSNRRSVSTLKPC 0.0784735709064937 0.00381834363219887 -0.548 -0.593666666666667 23.5810960864691 35.8303047448503 -0.548 -0.593666666666667 0.00438420033943642 0.000261197806521972 -4.69315736716974 -8.40495753403558 A0A286YFF8 NotFound A0A286YFF8.S205.p_NotFound A0A286YFF8_S205s _1_1_205_205 A0A286YFF8 A0A286YFF8|Q7Z3U7|Q7Z3U7-5|Q7Z3U7-6|Q7Z3U7-2|F8VZV1 Protein MON2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13109.13109.3 12.51 12.51 2.187 3 1 1 0 620.0215 1778.0813 S205s TMT10 205 (R) sVSTLKPCAK (D) S(0.99)VS(0.0)T(0.0)LKPCAK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MON2 192594.7 8 3 1105.1 176.81 HUMAN 1 -23.5811 -35.8303 QGPHKSPTPPPTLHL-p Q9NZM4;T921-p QGPHKSPTPPPTLHL 0.472747504381845 0.255601482862994 0.105666666666667 0.111 5.99545026579574 7.80427714181413 0.105666666666667 0.111 0.251451930032832 0.165795327067032 1.28375303884535 1.60069420383063 Q9NZM4 GLTSCR1 Q9NZM4.T921.p_GLTSCR1 Q9NZM4_T921t _1_1_921_921 Q9NZM4 Q9NZM4|A0A087WWH3|Q9NZM4-2 BRD4-interacting chromatin-remodeling complex-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21004.21004.4 20.1 15.3 1.178 3 1 1 0 668.6113 2591.4547 T921t TMT10 919 (K) SPtPPPTLHLVPEPAAPPPPPPR (T) S(0.0)PT(0.99)PPPT(0.0)LHLVPEPAAPPPPPPR t:Phosphorylated T BICRA 158829.7 3 3 2101.1 97.63 HUMAN 1 5.9955 7.8043 QGPPCSDSEEEVERK-p O43159;S106-p QGPPCSDSEEEVERK 0.0768119094193664 0.178428239174043 0.518333333333333 0.374666666666667 23.8799773096304 9.84822446893957 0.518333333333333 0.374666666666667 0.0040926279797958 0.103556545154655 4.76558870623432 1.95457660379614 O43159 RRP8 O43159.S106.p_RRP8 O43159_S106s _1_1_106_106 O43159 O43159|E9PPY3 Ribosomal RNA-processing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6747.6747.2 13.31 10.53 1.256 2 1 1 0 964.402 1847.8279 S106s TMT10 99 (K) QGPPCSDsEEEVER (K) QGPPCS(0.0)DS(0.99)EEEVER C:Carbamidomethylation,s:Phosphorylated S RRP8 51455.6 1 1 986.1 191.95 HUMAN 1 23.88 9.8482 QGPTPVCTPTFLERR-p Q9BYG3;T238-p QGPTPVCTPTFLERR 0.793335713775664 0.00341447528451321 0.0416666666666667 -0.619333333333333 1.94046370600777 36.8808092105946 0.0416666666666667 -0.619333333333333 0.639666533198695 0.000205078002625176 0.495576558234299 -8.81309015946087 Q9BYG3 NIFK Q9BYG3.T238.p_NIFK Q9BYG3_T238t _1_1_238_238 Q9BYG3 Q9BYG3 MKI67 FHA domain-interacting nucleolar phosphoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20521.20521.2 16.74 16.74 1.319 5 1 1 0 1157.5515 2234.1324 T238t TMT10 227 (K) TVDSQGPTPVCtPTFLER (R) T(0.0)VDS(0.0)QGPT(0.0)PVCT(0.99)PT(0.0)FLER C:Carbamidomethylation,t:Phosphorylated T NIFK 34392.7 1 5 1531.1 133.75 HUMAN 1 1.9405 -36.8808 QGPVELLSIPEDAPE-p Q9H501;S407-p QGPVELLSIPEDAPE 0.94506862863668 0.427859015231282 -0.0103333333333333 0.0943333333333333 0.481543105140013 4.90845612602308 -0.0103333333333333 0.0943333333333334 0.895046687240797 0.322964202349869 -0.138243743995164 1.0870389009678 Q9H501 ESF1 Q9H501.S407.p_ESF1 Q9H501_S407s _1_1_407_407 Q9H501 Q9H501|A0A087WX71 ESF1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25522.25522.4 15.89 15.89 99 1 1 1 0 809.1769 3153.732 S407s TMT10 394 (R) MKEEQVQGPVELLsIPEDAPEK (D) MKEEQVQGPVELLS(1.0)IPEDAPEK K:TMT10,s:Phosphorylated S ESF1 99193.8 1 6 500.1 291.39 HUMAN 1 -0.4815 4.9085 QGPVKCESPATTLWA-p J3KNL6;S720-p QGPVKCESPATTLWA 0.479207718540911 0.0164425845051409 -0.212333333333333 0.656666666666667 5.87931183878989 24.6378438311165 -0.212333333333333 0.656666666666667 0.258266939502637 0.00343728558604209 -1.26303402095985 4.9465769768293 J3KNL6 SEC16A J3KNL6.S720.p_SEC16A J3KNL6_S720s _1_1_720_720 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36907.36907.4 27.89 27.89 1.191 5 1 1 0 1064.7859 4176.155 S720s TMT10 718 (K) CEsPATTLWAQSELPDFGGNVLLAPAAPALYVCAK (P) CES(0.99)PAT(0.0)T(0.0)LWAQS(0.0)ELPDFGGNVLLAPAAPALY(0.0)VCAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SEC16A 253486.5 6 18 15.1 1143.82 HUMAN 1 -5.8793 24.6378 QGQADESSENEEEEI-p Q9Y4A0;S461-p QGQADESSENEEEEI 0.490461337009155 0.369731857493161 -0.123333333333333 0.164666666666667 5.70121869210844 5.73129518709542 -0.123333333333333 0.164666666666667 0.269077962692694 0.267220936256598 -1.2311497897503 1.2362625171185 Q9Y4A0 JRKL Q9Y4A0.S461.p_JRKL Q9Y4A0_S460sS461s_2_2_460_461 Q9Y4A0 Q9Y4A0 Jerky protein homolog-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21937.21937.4 10.54 4.96 99 2 2 2 0 812.8748 3088.5323 S460s S461s TMT10 452 (R) RAQGQADEssENEEEEIELIPEK (H) RAQGQADES(1.0)S(1.0)ENEEEEIELIPEK K:TMT10,s:Phosphorylated S JRKL 60309.9 1 2 5012.1 23.92 HUMAN 1 -5.7012 5.7313 QGQLQGGSREITKAA-p Q9UP83-2;S197-p QGQLQGGSREITKAA 0.134264480831341 0.925464839352614 0.433666666666667 -0.017 17.8998174261808 0.475214971215075 0.433666666666667 -0.017 0.0162187827835129 0.896351816376727 3.44201860738991 -0.136499178148628 Q9UP83 COG5 Q9UP83.2.S197.p_COG5 Q9UP83-2_S197s _1_1_197_197 Q9UP83-2 Q9UP83-2|Q9UP83-3 Isoform 2 of Conserved oligomeric Golgi complex subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12724.12724.3 14.87 14.87 4.354 2 1 1 0 685.0448 1973.1544 S197s TMT10 189 (R) LQGQLQGGsREITK (A) LQGQLQGGS(0.99)REIT(0.0)K K:TMT10,s:Phosphorylated S COG5 95356.1 2 2 4016.1 39.06 HUMAN 1 17.8998 -0.4752 QGQRLKLSPNKYQPI-p Q9C0D2-3;S654-p QGQRLKLSPNKYQPI 0.160631906279343 0.0013535533163748 -0.477666666666667 -1.03833333333333 15.8983591569112 46.5838977210577 -0.477666666666667 -1.03833333333333 0.0257136710825829 2.19588821484217e-05 -3.04869841109558 -13.5296736494432 Q9C0D2 CEP295 Q9C0D2.3.S654.p_CEP295 Q9C0D2-3_S654s _1_1_654_654 Q9C0D2-3 Q9C0D2-3 Isoform 3 of Centrosomal protein of 295 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20312.20312.4 11.93 11.93 3.208 4 1 1 0 770.7093 2999.8427 S654s TMT10 651 (R) LKLsPNKYQPIQPIQTSK (L) LKLS(0.99)PNKY(0.0)QPIQPIQT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CEP295 296782.5 3 3 1911.1 107.86 HUMAN 1 -15.8984 -46.5839 QGQVDLNSRCQIVRG-p Q9ULM0;S628-p QGQVDLNSRCQIVRG 0.703546429802328 0.774122401111641 -0.0906666666666667 -0.091 2.86971724138826 1.53768498139878 -0.0906666666666667 -0.091 0.516449992984871 0.701829310758546 -0.693823854878552 -0.40375426949015 Q9ULM0 PLEKHH1 Q9ULM0.S628.p_PLEKHH1 Q9ULM0_S628s _1_1_628_628 Q9ULM0 Q9ULM0|Q9ULM0-2 Pleckstrin homology domain-containing family H member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7683.7683.3 11.54 8.86 99 1 1 1 0 593.989 1699.9855 S628s TMT10 619 (R) KPQGQVDLNsR (C) KPQGQVDLNS(1.0)R K:TMT10,s:Phosphorylated S PLEKHH1 152827.1 1 14 981.1 192.43 HUMAN 1 -2.8697 -1.5377 QGRKAEGTPNQGKKT-p Q9P2E9;T225-p QGRKAEGTPNQGKKT 0.092306798909453 0.625791937774713 0.429666666666667 -0.0676666666666666 22.0328110333917 2.77064946084914 0.429666666666667 -0.0676666666666666 0.00626208411083257 0.528366231926793 4.32943637743926 -0.673340357727001 Q9P2E9 RRBP1 Q9P2E9.T225.p_RRBP1 Q9P2E9_T225t _1_1_225_225 Q9P2E9 Q9P2E9|A0A0A0MRV0|Q9P2E9-2|A0A087WVV2 Ribosome-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.4847.4847.3 10.91 6.05 99 1 1 1 0 599.6672 1717.0211 T225t TMT10 221 (R) KAEGtPNQGK (K) KAEGT(1.0)PNQGK K:TMT10,t:Phosphorylated T RRBP1 152868.9 4 5 479.1 299.08 HUMAN 1 22.0328 -2.7706 QGRSEEISESESEET-p P54259;S77-p QGRSEEISESESEET 0.922345826324192 0.211447430328884 0.0206666666666667 0.126333333333333 0.687766530171343 8.8771399590273 0.0206666666666667 0.126333333333333 0.853538955281353 0.129504841322992 0.19361337474712 1.78646230788773 P54259 ATN1 P54259.S77.p_ATN1 P54259_S77s _1_1_77_77 P54259 P54259 Atrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9965.9965.3 19.8 19.8 2.211 5 1 1 0 887.774 2581.3448 S77s TMT10 73 (R) SEEIsESESEETNAPKK (T) S(0.0)EEIS(0.99)ES(0.0)ES(0.0)EET(0.0)NAPKK K:TMT10,s:Phosphorylated S ATN1 125583.1 7 2 869.1 209.92 HUMAN 1 0.6878 8.8771 QGSAKELSPAALEKR-p O75683;S138-p QGSAKELSPAALEKR 0.177184179558631 0.0115841932008813 0.355 -0.400666666666667 14.8960377011222 27.0858865820365 0.355 -0.400666666666667 0.0323889023302706 0.00195619138427922 2.85897560369404 -5.58447685424451 O75683 SURF6 O75683.S138.p_SURF6 O75683_S138s _1_1_138_138 O75683 O75683 Surfeit locus protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18268.18478.2 13.71 7.37 99 1 1 1 0 748.4119 1415.851 S138s TMT10 136 (K) ELsPAALEK (R) ELS(1.0)PAALEK K:TMT10,s:Phosphorylated S SURF6 41563.8 10 2 2253.1 91.2 HUMAN 1 14.896 -27.0859 QGSALAPSPVSGVRR-p Q9UBB5;S44-p QGSALAPSPVSGVRR 0.272270630520433 0.0362655689559175 0.439333333333333 0.470333333333333 10.704384216605 19.390433650138 0.439333333333333 0.470333333333333 0.0850279245196342 0.0115068548538156 2.1043969060158 3.74596517350411 Q9UBB5 MBD2 Q9UBB5.S44.p_MBD2 Q9UBB5_S44s _1_1_44_44 Q9UBB5 Q9UBB5|Q9UBB5-3|X6RBL6 Methyl-CpG-binding domain protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15649.15649.4 27.53 27.53 2.585 6 1 1 0 1046.4605 4102.8516 S44s TMT10 10 (R) CCPEQEEGESAAGGSGAGGDSAIEQGGQGSALAPsPVSGVR (R) CCPEQEEGES(0.0)AAGGS(0.0)GAGGDS(0.0)AIEQGGQGS(0.0)ALAPS(0.99)PVS(0.0)GVR C:Carbamidomethylation,s:Phosphorylated S MBD2 43596.1 3 1 2176.1 94.49 HUMAN 1 10.7044 19.3904 QGSFGGPTLYENPHY-p Q8TDN6;T252-p QGSFGGPTLYENPHY 0.981203298905701 0.237833759142707 0.00533333333333332 0.158333333333333 0.164134494659116 8.21505728082754 0.00533333333333332 0.158333333333333 0.962911892534623 0.150832271654073 0.0486914266042581 1.67190308855037 Q8TDN6 BRIX1 Q8TDN6.T252.p_BRIX1 Q8TDN6_T252t_1_1_252_252 Q8TDN6 Q8TDN6 Ribosome biogenesis protein BRX1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17940.17940.4 13.05 13.05 1.171 5 1 1 0 811.6358 3162.5529 T252t N256n TMT10 243 (K) IFQGSFGGPtLYEnPHYQSPNMHRR (V) IFQGS(0.0)FGGPT(0.99)LY(0.0)EN(0.99)PHY(0.0)QS(0.0)PN(0.0)MHRR t:Phosphorylated T,n:Deamidated BRIX1 41685.9 6 1 4027.1 38.9 HUMAN 1 0.1641 8.2151 QGSKSNDSGEEAEKE-p Q5VZK9;S1360-p QGSKSNDSGEEAEKE 0.0975419138893254 0.0124525864934 1.14366666666667 -0.869 21.4069094290552 26.5821271390212 1.14366666666667 -0.869 0.00723284331519548 0.00219678364249542 4.18760631919262 -5.4485994942445 Q5VZK9 LRRC16A Q5VZK9.S1360.p_LRRC16A Q5VZK9_S1360s _1_1_1360_1360 Q5VZK9 Q5VZK9|Q5VZK9-2 F-actin-uncapping protein LRRC16A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28509.28509.3 9.27 9.27 1.273 2 1 1 0 747.0241 2159.0909 S1360s TMT10 1357 (K) SNDsGEEAEKEFIFV (-) S(0.0)NDS(0.99)GEEAEKEFIFV K:TMT10,s:Phosphorylated S CARMIL1 152809.3 2 17 280.1 388.82 HUMAN 1 21.4069 -26.5821 QGSSRNISQDMTQTS-p F5H211;S265-p QGSSRNISQDMTQTS 0.150283451076775 0.00262523620480912 0.268 0.762333333333333 16.6006351484293 39.2774161845178 0.268 0.762333333333333 0.0218744169085989 0.00011810230710386 3.18438506248263 9.81105350374341 F5H211 NotFound F5H211.S265.p_NotFound F5H211_S265s _1_1_265_265 F5H211 F5H211|P54252-1|P54252-4|A0A087X1A8|A0A0A0MS38|P54252-3|D3VVH9|C9JQV6|P54252-5 Ataxin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16837.16837.3 16.97 16.97 2.442 7 1 1 0 964.4769 2811.4559 S265s TMT10 263 (R) NIsQDMTQTSGTNLTSEELRK (R) NIS(0.99)QDMT(0.0)QT(0.0)S(0.0)GT(0.0)NLT(0.0)S(0.0)EELRK K:TMT10,s:Phosphorylated S ATXN3 42705 1 3 3674.1 45.57 HUMAN 1 16.6006 39.2774 QGTESRSSTPLPTIS-p P42166;S159-p QGTESRSSTPLPTIS 0.288318695668123 0.0150452882196435 0.169333333333333 0.399 10.1858780487759 25.2136440261368 0.169333333333333 0.399 0.0958102989183433 0.00301047896750327 2.01402313266419 5.09166460179825 P42166 TMPO P42166.S159.p_TMPO P42166_S159s _1_1_159_159 P42166 P42166|P42167|G5E972|P42167-2|P42167-3 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15179.15179.2 8.62 8.62 1.199 8 1 1 0 978.9794 1876.9814 S159s TMT10 158 (R) SsTPLPTISSSAENTR (Q) S(0.0)S(0.99)T(0.0)PLPT(0.0)IS(0.0)S(0.0)S(0.0)AENT(0.0)R s:Phosphorylated S TMPO 76061.2 20 7 123.1 546.19 HUMAN 1 10.1859 25.2136 QGTGAGISPVILNSG-p Q8IZD4;S147-p QGTGAGISPVILNSG 0.0684521497222417 0.0148537472018132 0.404333333333333 0.379666666666667 25.0917327964656 25.3074563108674 0.404333333333333 0.379666666666667 0.00309618370289933 0.00294614670455873 5.06704745606699 5.11558237225878 Q8IZD4 DCP1B Q8IZD4.S147.p_DCP1B Q8IZD4_S147s _1_1_147_147 Q8IZD4 Q8IZD4|Q8IZD4-2|F5GZK9 mRNA-decapping enzyme 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21425.21425.4 28.09 28.09 8.094 3 1 1 0 789.9252 3076.7155 S147s TMT10 138 (K) AHQGTGAGIsPVILNSGEGKEVDILR (M) AHQGT(0.0)GAGIS(0.99)PVILNS(0.0)GEGKEVDILR K:TMT10,s:Phosphorylated S DCP1B 68121.1 6 3 577.1 267.77 HUMAN 1 25.0917 25.3075 QGTGTNGSEISDSDY-p Q15417;S293-p QGTGTNGSEISDSDY 0.453366143163081 0.0516147517154942 0.110666666666667 0.346 6.33765375688673 17.1764569091358 0.110666666666667 0.346 0.232399197637566 0.0191581826355859 1.34449845077809 3.2949273451261 Q15417 CNN3 Q15417.S293.p_CNN3 Q15417_S293s_1_1_293_293 Q15417 Q15417|Q15417-2|Q15417-3 Calponin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17039.17249.5 34.46 34.46 1.226 13 1 1 0 1119.4689 5512.357 N291n S293s TMT10 272 (K) YCAAPTEPVIHNGSQGTGTnGsEISDSDYQAEYPDEYHGEYQDDYPR (D) Y(0.0)CAAPT(0.0)EPVIHN(0.0)GS(0.0)QGT(0.0)GT(0.0)N(0.99)GS(0.99)EIS(0.0)DS(0.0)DY(0.0)QAEY(0.0)PDEY(0.0)HGEY(0.0)QDDY(0.0)PR C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S CNN3 36584.2 6 11 1713.1 119.85 HUMAN 1 6.3377 17.1765 QGVLVQVSPSLVKRQ-p Q13868;S175-p QGVLVQVSPSLVKRQ 0.732651492896551 0.120913331010992 -0.049 -0.191333333333333 2.55974416389201 12.09723256115 -0.049 -0.191333333333333 0.554658386056268 0.0616988037653433 -0.629479476973827 -2.34840992152406 Q13868 EXOSC2 Q13868.S175.p_EXOSC2 Q13868_S175s _1_1_175_175 Q13868 Q13868|Q13868-3 Exosome complex component RRP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28392.28392.3 15.67 13.93 2.42 2 1 1 0 688.0751 1982.2414 S175s TMT10 166 (K) LGQGVLVQVsPSLVK (R) LGQGVLVQVS(0.99)PS(0.0)LVK K:TMT10,s:Phosphorylated S EXOSC2 33016.6 2 4 3300.1 54.46 HUMAN 1 -2.5597 -12.0972 QGVPLKHSGHLMKTN-p Q01826-2;S60-p QGVPLKHSGHLMKTN 0.182003668118224 0.199446593861233 -0.528 0.493666666666667 14.5616181219437 9.21240003645965 -0.528 0.493666666666667 0.0349814806523834 0.119883660839691 -2.79662948330877 1.84445603528852 Q01826 SATB1 Q01826.2.S60.p_SATB1 Q01826-2_S60s _1_1_60_60 Q01826-2 Q01826-2|H0YN86 Isoform 2 of DNA-binding protein SATB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13136.13136.5 11.37 11.37 99 1 1 1 0 466.8629 2250.3182 S60s TMT10 52 (K) MQGVPLKHsGHLMK (T) MQGVPLKHS(1.0)GHLMK K:TMT10,s:Phosphorylated S SATB1 89467.4 1 3 821.1 218.79 HUMAN 1 -14.5616 9.2124 QGVSKTQSLPVTEKV-p Q9NQW6;S485-p QGVSKTQSLPVTEKV 0.752663702058413 0.00898490162031833 -0.0606666666666667 -0.677666666666667 2.3547059694273 28.9795431672512 -0.0606666666666667 -0.677666666666667 0.581472798452751 0.00126486939161402 -0.585996258309528 -6.11829006027491 Q9NQW6 ANLN Q9NQW6.S485.p_ANLN Q9NQW6_S485s _1_1_485_485 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13467.13467.3 10.59 10.59 2.227 3 1 1 0 514.2848 1460.8725 S485s TMT10 483 (K) TQsLPVTEK (V) T(0.0)QS(0.99)LPVT(0.0)EK K:TMT10,s:Phosphorylated S ANLN 125566 3 32 68.1 675.08 HUMAN 1 -2.3547 -28.9795 QGVVRSLSYEEPRRH-p Q8IZD4;S275-p QGVVRSLSYEEPRRH 0.852863951293609 0.376534941115216 -0.034 0.113666666666667 1.33876875084625 5.63259440227838 -0.034 0.113666666666667 0.734722136469357 0.273363521068498 -0.356821640336659 1.21855190422154 Q8IZD4 DCP1B Q8IZD4.S275.p_DCP1B Q8IZD4_S275s _1_1_275_275 Q8IZD4 Q8IZD4|Q8IZD4-2|F5GZK9 mRNA-decapping enzyme 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7553.7553.3 10.86 5.74 1.149 3 1 1 0 482.5718 1365.7324 S275s TMT10 273 (R) SLsYEEPRR (H) S(0.0)LS(0.99)Y(0.0)EEPRR s:Phosphorylated S DCP1B 68121.1 2 4 577.1 267.77 HUMAN 1 -1.3388 5.6326 QGVVRTLSSSAQEDI-p Q9H788;S315-p QGVVRTLSSSAQEDI 0.229401753870038 0.733064361804993 -0.203 -0.0513333333333333 12.2854693965304 1.85951680053016 -0.203 -0.0513333333333333 0.0590817105107175 0.651700898783897 -2.38307364120008 -0.47740723789468 Q9H788 SH2D4A Q9H788.S315.p_SH2D4A Q9H788_S315s _1_1_315_315 Q9H788 Q9H788|Q9H788-2 SH2 domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16078.16078.2 14.85 7.4 1.134 4 1 1 0 814.9077 1548.8431 S315s TMT10 313 (R) TLsSSAQEDIIR (W) T(0.0)LS(0.99)S(0.0)S(0.0)AQEDIIR s:Phosphorylated S SH2D4A 52954.2 2 3 3619.1 46.82 HUMAN 1 -12.2855 -1.8595 QGWPRPLTPPAAGGL-p Q96QT6;T586-p QGWPRPLTPPAAGGL 0.429318346124526 0.80069574466481 0.107666666666667 0.027 6.76202075844484 1.35003450145424 0.107666666666667 0.027 0.210764724017026 0.732818711418223 1.41928847071965 0.359476938960752 Q96QT6 PHF12 Q96QT6.T586.p_PHF12 Q96QT6_T586t _1_1_586_586 Q96QT6 Q96QT6|Q96QT6-3|Q96QT6-5|C9J9G2|Q96QT6-2|Q96QT6-4 PHD finger protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23063.23276.4 19.49 13.5 4.293 2 1 1 0 787.1912 3065.7777 T586t TMT10 579 (R) QGWPRPLtPPAAGGLQNHTVGIIVK (T) QGWPRPLT(0.99)PPAAGGLQNHT(0.0)VGIIVK K:TMT10,t:Phosphorylated T PHF12 111750.5 4 6 626.1 258.17 HUMAN 1 6.762 1.35 QHAKYTCSFCGKTKM-p P61513;S40-p QHAKYTCSFCGKTKM 0.769034632828317 0.0523769786886803 0.051 -0.267666666666667 2.1884202703322 17.0894808466868 0.051 -0.267666666666667 0.604168353353804 0.019545730904382 0.550136228711033 -3.27776557066966 P61513 RPL37A P61513.S40.p_RPL37A P61513_S40s _1_1_40_40 P61513 A6NKH3|P61513|M0R2L6|E9PEL3|Q6P4E4|C9J4Z3|M0R0A1 60S ribosomal protein L37a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13259.13259.2 9.83 9.83 9.831 3 1 1 0 780.8529 1480.7329 S40s TMT10 37 (K) YTCsFCGK (T) Y(0.0)T(0.0)CS(0.99)FCGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RPL37A 10503.3 2 2 5395.1 19.74 HUMAN 1 2.1884 -17.0895 QHEEFDLSPDQWRKG-p Q86US8;S831-p QHEEFDLSPDQWRKG 0.435655667919564 0.0495585182982508 -0.117 -0.351333333333333 6.64351332774724 17.4537176583299 -0.117 -0.351333333333333 0.216595119852819 0.0179733170010889 -1.3984561619519 -3.34990142343755 Q86US8 SMG6 Q86US8.S831.p_SMG6 Q86US8_S831s _1_1_831_831 Q86US8 Q86US8 Telomerase-binding protein EST1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16198.16198.5 20.1 20.1 99 1 1 1 0 542.8856 2630.4294 S831s TMT10 823 (K) KQHEEFDLsPDQWRK (G) KQHEEFDLS(1.0)PDQWRK K:TMT10,s:Phosphorylated S SMG6 161600 6 4 1491.1 137.14 HUMAN 1 -6.6435 -17.4537 QHEVEIPSPTQKEKE-p Q08499-6;S284-p QHEVEIPSPTQKEKE 0.718947568381735 0.218077891945537 -0.0636666666666667 -0.124666666666667 2.70446388369466 8.70326565613572 -0.0636666666666667 -0.124666666666667 0.53648009332103 0.134794891781424 -0.659718640631796 -1.75638851760146 Q08499 PDE4D Q08499.6.S284.p_PDE4D Q08499-6_S284s _1_1_284_284 Q08499-6 Q08499-6|A0A1B0GW84|Q08499-9|Q08499-10|A0A087WSZ7|Q08499-2 Isoform 5 of cAMP-specific 3',5'-cyclic phosphodiesterase 4D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11555.11555.3 13.51 13.51 3.174 2 1 1 0 644.3401 1851.0376 S284s TMT10 277 (K) QHEVEIPsPTQK (E) QHEVEIPS(0.99)PT(0.0)QK K:TMT10,s:Phosphorylated S PDE4D 84996.7 1 4 2699.1 73.54 HUMAN 1 -2.7045 -8.7033 QHHRRQGSDAAVPST-p O15085-2;S311-p QHHRRQGSDAAVPST 0.848113005263951 0.0390853824373534 -0.0276666666666667 -0.25 1.38342496949312 18.905448481783 -0.0276666666666667 -0.25 0.727206082992218 0.012866343796224 -0.367471546037996 -3.64471068460048 O15085 ARHGEF11 O15085.2.S311.p_ARHGEF11 O15085-2_S311s_1_1_311_311 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36395.36395.5 20.78 20.78 0 7 1 1 0 1144.3458 5653.7386 Q309q S311s N345n Hydrogen 309 (R) qGsDAAVPSTGDQGVDQSPKPLIIGPEEDYDPGYFNnESDIIFQDLEK (L) Q(1.0)GS(0.99)DAAVPS(0.0)T(0.0)GDQGVDQS(0.0)PKPLIIGPEEDY(0.0)DPGY(0.0)FN(0.50)N(0.50)ES(0.0)DIIFQDLEK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S,n:Deamidated ARHGEF11 173153.4 6 6 228.1 424.05 HUMAN 1 -1.3834 -18.9054 QHIYRTISDGTISAS-p S4R347;S295-p QHIYRTISDGTISAS 0.941250546674147 0.208852488679825 -0.016 -0.282333333333333 0.517221511917941 8.94613975427472 -0.016 -0.282333333333333 0.887723769902554 0.127463554308945 -0.147970312172549 -1.7983965772197 S4R347 NotFound S4R347.S295.p_NotFound S4R347_S295s _1_1_295_295 S4R347 S4R347|Q5T0N5|Q5T0N5-5|Q5T0N5-2|Q5T0N5-4|Q5T0N5-3 Formin-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14603.14603.3 18.14 12.36 2.363 6 1 1 0 1017.5475 2970.6588 S295s TMT10 293 (R) TIsDGTISASKQESGKMDAK (T) T(0.0)IS(0.99)DGT(0.0)IS(0.0)AS(0.0)KQES(0.0)GKMDAK K:TMT10,s:Phosphorylated S FNBP1L 70981.3 19 3 1067.1 181.01 HUMAN 1 -0.5172 -8.9461 QHLLQAPSPPRTSGA-p Q9ULL5-3;S651-p QHLLQAPSPPRTSGA 0.24468390094228 0.349611792132472 0.248666666666667 0.158666666666667 11.6943256244698 6.05170597961371 0.248666666666667 0.158666666666667 0.0676966904656367 0.248215788163468 2.27823088991108 1.29345916207604 Q9ULL5 PRR12 Q9ULL5.3.S651.p_PRR12 Q9ULL5-3_S651s _1_1_651_651 Q9ULL5-3 Q9ULL5-3 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28102.28102.5 31.31 31.31 17.533 3 1 1 0 901.6655 4424.325 S651s TMT10 617 (K) GKGDGSELLAGPGGPPAERTEDEEFLIQHLLQAPsPPR (T) GKGDGS(0.0)ELLAGPGGPPAERT(0.0)EDEEFLIQHLLQAPS(0.99)PPR K:TMT10,s:Phosphorylated S PRR12 212010 3 7 182.1 477.91 HUMAN 1 11.6943 6.0517 QHQHGYDSDEEVDSE-p Q8IWZ8;S485-p QHQHGYDSDEEVDSE 0.363896119216639 0.945747460858941 0.160666666666667 0.0163333333333334 8.1488954196587 0.350376550677248 0.160666666666667 0.0163333333333334 0.153147692649679 0.922491439991594 1.6609805407684 0.101909287302124 Q8IWZ8 SUGP1 Q8IWZ8.S485.p_SUGP1 Q8IWZ8_S485s _1_1_485_485 Q8IWZ8 Q8IWZ8 SURP and G-patch domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17404.17404.4 29.62 26.01 9.656 4 1 1 0 876.3938 3422.5835 S485s TMT10 475 (K) AVQQHQHGYDsDEEVDSELGTWEHQLR (R) AVQQHQHGY(0.0)DS(0.99)DEEVDS(0.0)ELGT(0.0)WEHQLR s:Phosphorylated S SUGP1 72583.7 4 5 1701.1 120.31 HUMAN 1 8.1489 0.3504 QHQKQLMTLENKLKA-p Q7L7X3;T480-p QHQKQLMTLENKLKA 0.698184520976541 0.0293841014433374 -0.0763333333333334 0.287666666666667 2.93299994798671 20.7345959983745 -0.0763333333333334 0.287666666666667 0.508979165342597 0.00844384786991738 -0.706770667462673 4.03445290999935 Q7L7X3 TAOK1 Q7L7X3.T480.p_TAOK1 Q7L7X3_T480t _1_1_480_480 Q7L7X3 Q7L7X3|Q7L7X3-3|Q7L7X3-2 Serine/threonine-protein kinase TAO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18628.18628.2 12.63 7.1 99 1 1 1 0 757.9086 1434.8391 T480t TMT10 477 (K) QLMtLENK (L) QLMT(1.0)LENK K:TMT10,t:Phosphorylated T TAOK1 116524.7 3 5 1125.1 174.76 HUMAN 1 -2.933 20.7346 QHQQLYYSQDDSNRK-p Q99569;S1117-p QHQQLYYSQDDSNRK 0.886998410068536 0.188780927672169 0.0366666666666667 -0.135333333333333 1.01582669015031 9.5218350359996 0.0366666666666667 -0.135333333333333 0.791438787979116 0.111639143627347 0.277843687931383 -1.89801608512136 Q99569 PKP4 Q99569.S1117.p_PKP4 Q99569_S1117s _1_1_1117_1117 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8900.8900.3 16.44 16.44 4.696 4 1 1 0 854.424 2481.2887 S1117s TMT10 1109 (R) LQHQQLYYsQDDSNRK (N) LQHQQLY(0.0)Y(0.0)S(0.99)QDDS(0.0)NRK K:TMT10,s:Phosphorylated S PKP4 132664.7 2 28 122.1 546.31 HUMAN 1 1.0158 -9.5218 QHRRIKLSPLMMYEK-p Q96HI0;S228-p QHRRIKLSPLMMYEK 0.518846820664332 0.115003759459767 -0.0926666666666667 -0.187333333333333 5.26536164277251 12.3918041408531 -0.0926666666666667 -0.187333333333333 0.297484152956874 0.0576526913529918 -1.15247224569781 -2.40078460070648 Q96HI0 SENP5 Q96HI0.S228.p_SENP5 Q96HI0_S228s _1_1_228_228 Q96HI0 Q96HI0|Q96HI0-2 Sentrin-specific protease 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26846.26846.3 14.26 14.26 2.295 2 1 1 0 707.3999 2040.2204 S228s TMT10 225 (R) IKLsPLMMYEK (L) IKLS(0.99)PLMMY(0.0)EK K:TMT10,s:Phosphorylated S SENP5 88003.7 1 2 1582.1 129.81 HUMAN 1 -5.2654 -12.3918 QHRVKLGSPDSTSPS-p Q96SK2;S260-p QHRVKLGSPDSTSPS 0.572401251807993 0.150570208158758 0.0936666666666666 -0.159 4.46296936009836 10.8154954249709 0.0936666666666667 -0.159 0.35785168293399 0.082880136468881 1.00465503614814 -2.12287751840586 Q96SK2 TMEM209 Q96SK2.S260.p_TMEM209 Q96SK2_S260s _1_1_260_260 Q96SK2 Q96SK2|Q96SK2-2|Q96SK2-3 Transmembrane protein 209 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23018.23018.3 13.29 13.29 1.352 10 1 1 0 828.0439 2402.1462 S260s TMT10 258 (K) LGsPDSTSPSSSPTFWNYSR (S) LGS(0.99)PDS(0.0)T(0.0)S(0.0)PS(0.0)S(0.0)S(0.0)PT(0.0)FWNY(0.0)S(0.0)R s:Phosphorylated S TMEM209 63319.9 1 8 1575.1 130.5 HUMAN 1 4.463 -10.8155 QHSKGSKSPDLLMYQ-p P82909;S61-p QHSKGSKSPDLLMYQ 0.541634736329853 0.0472027490991535 0.0883333333333333 0.269333333333333 4.91261716693011 17.7414246061099 0.0883333333333333 0.269333333333333 0.322654913669199 0.0168212218792314 1.08802014467175 3.40738324441858 P82909 MRPS36 P82909.S61.p_MRPS36 P82909_S61s_1_1_61_61 P82909 P82909 28S ribosomal protein S36, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27209.27209.3 13.1 13.1 6.887 3 1 1 0 848.0995 2446.3304 S61s M66m TMT10 61 (K) sPDLLmYQGPPDTAEIIK (T) S(0.99)PDLLM(1.0)Y(0.0)QGPPDT(0.0)AEIIK K:TMT10,s:Phosphorylated S,m:Oxidized methionine MRPS36 11466 13 1 4231.1 35.05 HUMAN 1 4.9126 17.7414 QHSPRIGSPGNHKSP-p Q6ZV73;S1293-p QHSPRIGSPGNHKSP 0.373999337876944 0.00529900879737328 -0.140666666666667 -0.845333333333333 7.90718738467791 33.0481811366526 -0.140666666666667 -0.845333333333333 0.161912829197392 0.000495657733143567 -1.61905587851051 -7.40255874709181 Q6ZV73 FGD6 Q6ZV73.S1293.p_FGD6 Q6ZV73_S1293s _1_1_1293_1293 Q6ZV73 Q6ZV73|Q6ZV73-2 FYVE, RhoGEF and PH domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6688.6688.3 9.97 9.97 99 1 1 1 0 449.9106 1267.7523 S1293s TMT10 1291 (R) IGsPGNHK (S) IGS(1.0)PGNHK K:TMT10,s:Phosphorylated S FGD6 162696.3 2 14 630.1 257.05 HUMAN 1 -7.9072 -33.0482 QIAQLRPSPRWTAQG-p P11940;S434-p QIAQLRPSPRWTAQG 0.195506160215315 0.00810221562943061 -0.212666666666667 -0.572 13.8240004983845 29.7923188914966 -0.212666666666667 -0.572 0.041457198421157 0.00104898218082977 -2.66066120857928 -6.35919618040465 P11940 PABPC1 P11940.S434.p_PABPC1 P11940_S434s _1_1_434_434 P11940 P11940|E7ERJ7|E7EQV3|P11940-2|A0A087WTT1 Polyadenylate-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18268.18268.3 11.01 11.01 2.903 4 1 1 0 742.0556 2144.1814 S434s TMT10 420 (R) AAYYPPSQIAQLRPsPR (W) AAY(0.0)Y(0.0)PPS(0.0)QIAQLRPS(0.99)PR s:Phosphorylated S PABPC1 70897.8 1 3 1996.2 103.46 HUMAN 1 -13.824 -29.7923 QIFEEGESDDEFDMD-p Q9NRH2;S495-p QIFEEGESDDEFDMD 0.427656291446883 0.436590223286727 -0.119666666666667 0.0763333333333333 6.79287728067484 4.7951984462717 -0.119666666666667 0.0763333333333333 0.209272552738655 0.331497422041557 -1.42470651217952 1.06618189228466 Q9NRH2 SNRK Q9NRH2.S495.p_SNRK Q9NRH2_S495s _1_1_495_495 Q9NRH2 Q9NRH2|E7EUC4 SNF-related serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32635.32842.4 20.35 17.12 14.359 2 1 1 0 901.6707 3523.6827 S495s TMT10 482 (K) SAPVLNQIFEEGEsDDEFDMDENLPPK (L) S(0.0)APVLNQIFEEGES(0.99)DDEFDMDENLPPK K:TMT10,s:Phosphorylated S SNRK 85187.6 4 3 3054.1 62.03 HUMAN 1 -6.7929 4.7952 QIFHSKESIVATTKS-p Q6P0N0;S256-p QIFHSKESIVATTKS 0.628959461918082 0.0421452937324321 -0.0673333333333334 -0.409333333333333 3.74184153352763 18.4243765450215 -0.0673333333333334 -0.409333333333333 0.422489428607757 0.0143734937840643 -0.867449115507314 -3.54567647907326 Q6P0N0 MIS18BP1 Q6P0N0.S256.p_MIS18BP1 Q6P0N0_S253sS256s_2_2_253_256 Q6P0N0 Q6P0N0|G5E9K5|Q6P0N0-2 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19051.19051.4 7.78 7.78 7.78 4 2 2 0 609.8274 2276.3581 S253s S256s TMT10 249 (K) QIFHsKEsIVATTK (S) QIFHS(0.99)KES(0.99)IVAT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S MIS18BP1 129996 1 40 54.1 728.39 HUMAN 1 -3.7418 -18.4244 QIIITRASNETLVSC-p Q96N06-2;S95-p QIIITRASNETLVSC 0.578200159922668 0.504774213232432 0.0816666666666667 -0.0753333333333333 4.37646879277207 3.97880364068329 0.0816666666666667 -0.0753333333333333 0.365050645504242 0.400054938482602 0.988441990676725 -0.91292171251888 Q96N06 SPATA33 Q96N06.2.S95.p_SPATA33 Q96N06-2_S95s _1_1_95_95 Q96N06-2 Q96N06-2|A0A087WYH0 Isoform 2 of Spermatogenesis-associated protein 33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24673.24673.4 20.15 20.15 1.149 8 1 1 0 835.9277 3260.7106 S95s TMT10 84 (K) VVVPQIIITRAsNETLVSCSSSGSDQQR (T) VVVPQIIIT(0.0)RAS(0.99)NET(0.0)LVS(0.0)CS(0.0)S(0.0)S(0.0)GS(0.0)DQQR C:Carbamidomethylation,s:Phosphorylated S SPATA33 15699.3 3 2 3220.1 56.96 HUMAN 1 4.3765 -3.9788 QIIVDPLSFSEERFR-p P35221;S295-p QIIVDPLSFSEERFR 0.285207992770294 0.956195435419187 -0.173 -0.00566666666666665 10.2828408275091 0.278663017397442 -0.173 -0.00566666666666665 0.0936948924990285 0.937850681341687 -2.03089527057938 -0.0816549368194332 P35221 CTNNA1 P35221.S295.p_CTNNA1 P35221_S295s _1_1_295_295 P35221 P35221-2|G3XAM7 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28628.28628.3 16.11 15.01 2.385 2 1 1 0 614.6456 1761.9584 S295s TMT10 288 (K) QIIVDPLsFSEER (F) QIIVDPLS(0.99)FS(0.0)EER s:Phosphorylated S CTNNA1 100754.2 4 5 169.1 491.55 HUMAN 1 -10.2828 -0.2787 QIKAIRGSNEYTEGP-p O43609;S50-p QIKAIRGSNEYTEGP 0.0188125555564293 0.00488459422585612 -0.805333333333333 -0.594666666666667 40.5908427543992 33.7499938151649 -0.805333333333334 -0.594666666666667 8.72801983531869e-05 0.000421697103971603 -10.4248979188179 -7.64518433406908 O43609 SPRY1 O43609.S50.p_SPRY1 O43609_S50s _1_1_50_50 O43609 O43609 Protein sprouty homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12995.12995.3 16.11 16.11 3.376 4 1 1 0 749.0599 2165.1967 S50s TMT10 46 (K) AIRGsNEYTEGPSVVK (R) AIRGS(0.99)NEY(0.0)T(0.0)EGPS(0.0)VVK K:TMT10,s:Phosphorylated S SPRY1 36604.7 2 1 5101.1 22.96 HUMAN 1 -40.5908 -33.75 QIKEDSLSEESADAR-p Q9BVS4;S382-p QIKEDSLSEESADAR 0.719569667874495 0.39258981722653 -0.0523333333333333 0.106666666666667 2.6974940372861 5.39805967249634 -0.0523333333333334 0.106666666666667 0.537341763468529 0.288532030971764 -0.658270445852229 1.17627617154726 Q9BVS4 RIOK2 Q9BVS4.S382.p_RIOK2 Q9BVS4_S380sS382s_2_2_380_382 Q9BVS4 Q9BVS4|Q9BVS4-2 Serine/threonine-protein kinase RIO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12928.12928.3 13.65 9.64 2.155 5 2 2 0 956.7584 2708.3263 S380s S382s TMT10 369 (R) SSGDPEQIKEDsLsEESADAR (S) S(0.0)S(0.0)GDPEQIKEDS(0.99)LS(0.99)EES(0.0)ADAR K:TMT10,s:Phosphorylated S RIOK2 63738.3 1 6 1652.1 123.35 HUMAN 2 -2.6975 5.3981 QIKKKRLSELGITQA-p Q8NEM2;S634-p QIKKKRLSELGITQA 0.265844592281577 0.00550748174908357 -0.179 -0.511333333333333 10.9052519715201 32.7541927615744 -0.179 -0.511333333333333 0.0811848145287323 0.000530372165607365 -2.13951840161873 -7.30287947010548 Q8NEM2 SHCBP1 Q8NEM2.S634.p_SHCBP1 Q8NEM2_S634s _1_1_634_634 Q8NEM2 Q8NEM2 SHC SH2 domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.35581.35581.4 29.12 27.6 1.178 3 1 1 0 945.4787 3698.9286 S634s TMT10 632 (K) RLsELGITQADDNLMSQEMFVGIVGNQFK (W) RLS(0.99)ELGIT(0.0)QADDNLMS(0.0)QEMFVGIVGNQFK K:TMT10,s:Phosphorylated S SHCBP1 76773.1 11 4 1723.1 119.45 HUMAN 1 -10.9053 -32.7542 QIKNLERSGNQHKAE-p Q5BJF6-4;S368-p QIKNLERSGNQHKAE 0.295125154480667 0.00337660948544836 0.243666666666667 -0.756 9.99084704935113 36.9752665383576 0.243666666666667 -0.756 0.10021097672056 0.000200665793217373 1.98012031272834 -8.85063272884395 Q5BJF6 ODF2 Q5BJF6.4.S368.p_ODF2 Q5BJF6-4_S368s _1_1_368_368 Q5BJF6-4 Q5BJF6|Q5BJF6-4|Q5BJF6-3|Q5BJF6-2|Q5BJF6-7|Q5BJF6-6|Q5BJF6-10|Q5BJF6-5|Q5BJF6-8|Q5BJF6-9 Isoform 4 of Outer dense fiber protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23182.23182.4 21 16.73 99 1 1 1 0 670.6085 2599.4481 S368s TMT10 368 (R) sGNQHKAEVEAIMEQLK (E) S(1.0)GNQHKAEVEAIMEQLK K:TMT10,s:Phosphorylated S ODF2 96031.2 3 9 853.1 211.96 HUMAN 1 9.9908 -36.9753 QIKQEPESEEEEEEK-p P49756;S583-p QIKQEPESEEEEEEK 0.0635370415880919 0.0689517361438301 -0.488 0.507666666666667 25.856593457095 15.4463491681049 -0.488 0.507666666666667 0.00259621499702884 0.0285341594120159 -5.26404861982322 2.96058824448383 P49756 RBM25 P49756.S583.p_RBM25 P49756_S583s _1_1_583_583 P49756 P49756 RNA-binding protein 25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7733.7733.5 19.87 19.87 99 1 1 1 0 725.5778 3543.8948 S583s TMT10 573 (R) RQPQIKQEPEsEEEEEEKQEK (E) RQPQIKQEPES(1.0)EEEEEEKQEK K:TMT10,s:Phosphorylated S RBM25 100526.1 30 1 353.1 350.09 HUMAN 1 -25.8566 15.4463 QIKQKVDSLLENLEK-p P07910-2;S196-p QIKQKVDSLLENLEK 0.517376321896188 0.0227731036088646 -0.087 0.346 5.28522771566001 22.4263620095952 -0.087 0.346 0.296126469194493 0.00571957552455357 -1.1560801337823 4.41532820105813 P07910 HNRNPC P07910.2.S196.p_HNRNPC P07910-2_S196s_1_1_196_196 P07910-2 G3V2Q1|A0A0G2JPF8|P07910-2|O60812|B2RXH8|A0A0G2JNQ3|P07910-3 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29364.29364.3 13.19 9.23 99 1 1 1 0 646.3509 1874.0999 Q192q S196s Hydrogen 192 (K) qKVDsLLENLEK (I) Q(1.0)KVDS(1.0)LLENLEK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S HNRNPC 32394 4 17 261.1 397.39 HUMAN 1 -5.2852 22.4264 QIKSLPATPQGKNMT-p Q13111;T259-p QIKSLPATPQGKNMT 0.0982861688091806 0.00189854283886182 -0.313666666666667 -1.40133333333333 21.3283493021788 42.7172662769118 -0.313666666666667 -1.40133333333333 0.00736486973588771 5.34900953809751e-05 -4.1700065707832 -11.4237443642178 Q13111 CHAF1A Q13111.T259.p_CHAF1A Q13111_T259t _1_1_259_259 Q13111 Q13111|Q13111-3|Q13111-2 Chromatin assembly factor 1 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10814.10814.2 14.87 13.07 5.441 2 1 1 0 718.8984 1356.8251 T259t TMT10 255 (K) SLPAtPQGK (N) S(0.0)LPAT(0.99)PQGK K:TMT10,t:Phosphorylated T CHAF1A 108122.1 2 10 633.1 256.49 HUMAN 1 -21.3283 -42.7173 QILDSAASLTGSKRQ-p P46013;S1689-p QILDSAASLTGSKRQ 0.237800187730078 0.814075753234524 -0.253 -0.0496666666666666 11.9494524243809 1.25050216142869 -0.253 -0.0496666666666666 0.0638343966042835 0.749807506370905 -2.32337206147841 -0.335551109409172 P46013 MKI67 P46013.S1689.p_MKI67 P46013_S1689s _1_1_1689_1689 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20724.20724.3 8.09 8.09 1.885 4 1 1 0 610.3334 1749.0158 S1689s TMT10 1682 (K) QILDSAAsLTGSK (R) QILDS(0.0)AAS(0.99)LT(0.0)GS(0.0)K K:TMT10,s:Phosphorylated S MKI67 360912.4 1 53 5.1 1918.46 HUMAN 1 -11.9495 -1.2505 QILENLLSARKRAKA-p M0R2B7;S691-p QILENLLSARKRAKA 0.236277322601605 0.799587734462644 0.784 -0.109 12.0044422120636 1.35802370389637 0.784 -0.109 0.0630312295215938 0.73147187061292 2.33312252560158 -0.361383758662322 M0R2B7 NotFound M0R2B7.S691.p_NotFound M0R2B7_S691s _1_1_691_691 M0R2B7 M0R2B7|P28340|M0QZR8 DNA polymerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37929.37929.3 11.29 11.29 99 1 1 1 0 616.0199 1766.0737 S691s TMT10 680 (K) GLLPQILENLLsAR (K) GLLPQILENLLS(1.0)AR s:Phosphorylated S POLD1 127926.5 1 1 6504.1 11.29 HUMAN 1 12.0044 -1.358 QILKEVQSPEGMISL-p Q9H6R4;S811-p QILKEVQSPEGMISL 0.511225583155423 0.232919094154321 0.0866666666666667 -0.134666666666667 5.38734238772477 8.33403783204023 0.0866666666666667 -0.134666666666667 0.289244934011496 0.146756118520047 1.17459079004934 -1.6925030931065 Q9H6R4 NOL6 Q9H6R4.S811.p_NOL6 Q9H6R4_S811s _1_1_811_811 Q9H6R4 Q9H6R4|Q9H6R4-4|A0A0A0MRW6|Q9H6R4-2 Nucleolar protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19785.19785.2 12.03 7.65 2.667 2 1 1 0 827.9101 1574.841 S811s TMT10 808 (K) EVQsPEGMISLR (D) EVQS(0.99)PEGMIS(0.0)LR s:Phosphorylated S NOL6 128446.5 2 3 4638.1 28.52 HUMAN 1 5.3873 -8.334 QILNGGESPKQKGQE-p Q13033-2;S229-p QILNGGESPKQKGQE 0.547801609524564 0.0228330375005169 -0.084 -0.331666666666667 4.82569343393514 22.4103780668403 -0.084 -0.331666666666667 0.329177889611527 0.00574066485760813 -1.07201654770507 -4.41163074017589 Q13033 STRN3 Q13033.2.S229.p_STRN3 Q13033-2_S229s _1_1_229_229 Q13033-2 Q13033|Q13033-2|G3V340 Isoform Alpha of Striatin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23767.23767.2 17.85 13.47 99 1 1 1 0 969.0156 1857.0482 S229s TMT10 219 (K) NLEQILNGGEsPK (Q) NLEQILNGGES(1.0)PK K:TMT10,s:Phosphorylated S STRN3 78142.7 29 6 1014.1 188.21 HUMAN 1 -4.8257 -22.4104 QILPREKTPPKCEIQ-p O60765;T185-p QILPREKTPPKCEIQ 0.204713889706557 0.130025143919627 -0.231666666666667 -0.208666666666667 13.32632870481 11.6758042653891 -0.231666666666667 -0.208666666666667 0.0464908117818196 0.0679860130761245 -2.57003926460129 -2.27386110398129 O60765 ZNF354A O60765.T185.p_ZNF354A O60765_T185t _1_1_185_185 O60765 O60765 Zinc finger protein 354A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12015.12015.4 11.71 7.55 2.095 2 1 1 0 682.1342 2645.5466 T185t TMT10 183 (R) EKtPPKCEIQGNSLK (Q) EKT(0.99)PPKCEIQGNS(0.0)LK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ZNF354A 71061.3 2 26 240.25 415.72 HUMAN 1 -13.3263 -11.6758 QILSFNKSGGGGDIH-p A0A087X1N8;S81-p QILSFNKSGGGGDIH 0.22040856583168 0.604080798618865 -0.844333333333333 0.061 12.6450675328123 2.96963478990729 -0.844333333333333 0.061 0.0543867674509763 0.504703737694966 -2.44730235027917 0.714138355105133 A0A087X1N8 SERPINB6 A0A087X1N8.S81.p_SERPINB6 A0A087X1N8_S81s _1_1_81_81 A0A087X1N8 A0A087X1N8|A0A024QZX5 Serpin B6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24893.24893.4 18.4 18.4 9.256 3 1 1 0 646.3322 2502.3353 S81s TMT10 81 (K) sGGGGDIHQGFQSLLTEVNK (T) S(0.99)GGGGDIHQGFQS(0.0)LLT(0.0)EVNK K:TMT10,s:Phosphorylated S SERPINB6 45164 1 1 4451.1 31.19 HUMAN 1 -12.6451 2.9696 QINIHNLSAFYDSEL-p P49736;S878-p QINIHNLSAFYDSEL 0.260386657049657 0.973003592380411 0.233 -0.00466666666666666 11.0795396025539 0.16701710001673 0.233 -0.00466666666666666 0.0779912785030411 0.962272977207878 2.17004988806293 -0.0495265095159967 P49736 MCM2 P49736.S878.p_MCM2 P49736_S878s_1_1_878_878 P49736 P49736 DNA replication licensing factor MCM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30863.30863.3 17.01 17.01 6.304 3 1 1 0 793.0577 2296.1923 N876n S878s TMT10 871 (R) QINIHnLsAFYDSELFR (M) QIN(0.0)IHN(0.99)LS(0.99)AFY(0.0)DS(0.0)ELFR n:Deamidated,s:Phosphorylated S MCM2 102579 1 10 259.1 397.63 HUMAN 1 11.0795 -0.167 QINSKFISDRESRRS-p F8VX04;S45-p QINSKFISDRESRRS 0.93527869194269 0.00444805347299487 -0.0153333333333333 -0.579333333333333 0.568535193650152 34.5426948977762 -0.0153333333333334 -0.579333333333333 0.87729666948923 0.000351342356808201 -0.161848804467438 -7.92737209175264 F8VX04 SLC38A1 F8VX04.S45.p_SLC38A1 F8VX04_S45s _1_1_45_45 F8VX04 F8VX04|Q9H2H9 Sodium-coupled neutral amino acid transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7685.7685.3 7.94 7.94 4.567 2 1 1 0 440.2161 1238.6691 S45s TMT10 43 (K) FIsDRESR (R) FIS(0.99)DRES(0.0)R s:Phosphorylated S SLC38A1 56936.1 1 2 2270.1 90.47 HUMAN 1 -0.5685 -34.5427 QINYKEDSESDGSQK-p Q96T23;S1221-p QINYKEDSESDGSQK 0.706123032840062 0.151500034506046 0.0545 -0.148166666666667 2.84279916782533 10.7768119603577 0.0545 -0.148166666666667 0.519660950349923 0.0836216637252359 0.68829808155684 -2.11612120238715 Q96T23 RSF1 Q96T23.S1221.p_RSF1 Q96T23_S1221sS1223s_2_2_1221_1223 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11626.11626.4 11.64 11.64 2.222 4 2 2 0 644.5541 2415.2607 S1221s S1223s TMT10 1214 (R) QINYKEDsEsDGSQK (S) QINY(0.0)KEDS(0.99)ES(0.99)DGS(0.0)QK K:TMT10,s:Phosphorylated S RSF1 165358.1 5 27 39.1 857.38 HUMAN 2 2.8428 -10.7768 QIQEIQRTPQRYSSR-p Q9UN81;T203-p QIQEIQRTPQRYSSR 0.336940767668124 0.129681076821148 -0.208333333333333 -0.320666666666667 8.80126651236629 11.6918505565256 -0.208333333333333 -0.320666666666667 0.131787235765647 0.0677352821746035 -1.77396182163338 -2.27669189818401 Q9UN81 NotFound Q9UN81.T203.p_NotFound Q9UN81_T203t _1_1_203_203 Q9UN81 Q9UN81 LINE-1 retrotransposable element ORF1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9410.9410.3 15.92 15.92 99 1 1 1 0 706.7064 2038.1355 T203t TMT10 192 (R) QANVQIQEIQRtPQR (Y) QANVQIQEIQRT(1.0)PQR t:Phosphorylated T L1RE1 40283.2 1 159 240.3 415.72 HUMAN 1 -8.8013 -11.6919 QIQKNTPSPDVTLGT-p M0R2Z9;S291-p QIQKNTPSPDVTLGT 0.321295358159683 0.667109092738338 0.221333333333333 -0.0606666666666667 9.23070407252623 2.40602673032577 0.221333333333333 -0.0606666666666667 0.119379455236614 0.574641949731692 1.84830645018007 -0.596878862376959 M0R2Z9 SUGP2 M0R2Z9.S291.p_SUGP2 M0R2Z9_S291s _1_1_291_291 M0R2Z9 M0R2Z9|Q8IX01|Q8IX01-3|Q8IX01-4|M0R3F6 SURP and G-patch domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.35930.35930.5 22.67 22.67 1.224 5 1 1 0 838.0618 4106.2992 S291s TMT10 288 (K) NTPsPDVTLGTNPGTEDIQFPIQKIPLGLDLK (N) NT(0.0)PS(0.99)PDVT(0.0)LGT(0.0)NPGT(0.0)EDIQFPIQKIPLGLDLK K:TMT10,s:Phosphorylated S SUGP2 122455.2 5 5 963.1 194.03 HUMAN 1 9.2307 -2.406 QIQSIQQSIERLLV_-p B1AHD1;S126-p QIQSIQQSIERLLV_ 0.691992312130027 0.0979306747446549 0.0553333333333333 0.265 2.99815045728316 13.3420929889138 0.0553333333333333 0.265 0.501400721168449 0.0463223625264367 0.720036610715808 2.57144139373995 B1AHD1 NotFound B1AHD1.S126.p_NotFound B1AHD1_S126s _1_1_126_126 B1AHD1 B1AHD1|P55769 NHP2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12125.12125.2 16.44 13.52 4.257 2 1 1 0 883.9557 1686.9336 S126s TMT10 118 (K) QQIQSIQQsIER (L) QQIQS(0.0)IQQS(0.99)IER s:Phosphorylated S SNU13 14855.1 3 2 4151.1 36.58 HUMAN 1 2.9982 13.3421 QIRQRSVSQERLEDS-p Q5T5U3;S458-p QIRQRSVSQERLEDS 0.852134949471934 0.0263581786161247 -0.041 0.291333333333333 1.34584023044417 21.45026696347 -0.041 0.291333333333333 0.733526785108435 0.00716099389793174 -0.358512234755788 4.1930468863029 Q5T5U3 ARHGAP21 Q5T5U3.S458.p_ARHGAP21 Q5T5U3_S458s _1_1_458_458 Q5T5U3 Q5T5U3|A0A087WW76|A0A1B0GV73|F8W9U9|Q5T5U3-3 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19462.19462.3 16.01 12.54 1.102 3 1 1 0 720.3789 2079.152 S458s TMT10 456 (R) SVsQERLEDSVLMK (Y) S(0.0)VS(0.99)QERLEDS(0.0)VLMK K:TMT10,s:Phosphorylated S ARHGAP21 218696.3 3 7 148.1 512.52 HUMAN 1 -1.3458 21.4503 QIRSRTPSASNDDQQ-p O43765;S305-p QIRSRTPSASNDDQQ 0.114688242267433 0.62217190871681 -0.857 -0.230666666666667 19.5743976707044 2.80148638225441 -0.857 -0.230666666666667 0.0110296119452476 0.52462787449535 -3.78820100875096 -0.679703399796126 O43765 SGTA O43765.S305.p_SGTA O43765_S305s_1_1_305_305 O43765 O43765 Small glutamine-rich tetratricopeptide repeat-containing protein alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4876.4876.2 7.21 7.21 1.255 3 1 1 0 751.2974 1420.6389 S305s N308n TMT10 303 (R) TPsASnDDQQE (-) T(0.0)PS(0.99)AS(0.0)N(1.0)DDQQE s:Phosphorylated S,n:Deamidated SGTA 34290.7 2 4 2055.1 100.31 HUMAN 1 -19.5744 -2.8015 QIRVPNGSNPYTLKL-p D6W592;S527-p QIRVPNGSNPYTLKL 0.335590278204507 0.579255664466779 -0.137 -0.0623333333333333 8.8454068121473 3.20017390479431 -0.137 -0.0623333333333333 0.130454576355963 0.47861092689348 -1.78160241658826 -0.76067379467362 D6W592 NotFound D6W592.S527.p_NotFound D6W592_S527s _1_1_527_527 D6W592 Q8WVV9|D6W592|Q8WVV9-4|C9IYN3|Q8WVV9-5|B7WPG3 Heterogeneous nuclear ribonucleoprotein L-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12465.12465.2 13.87 13.87 6.758 3 1 1 0 749.8784 1418.7841 S527s Hydrogen 523 (R) VPNGsNPYTLK (L) VPNGS(0.99)NPY(0.0)T(0.0)LK K:TMT10-Lys-Only,s:Phosphorylated S HNRPLL 60954 4 6 1148.1 172.52 HUMAN 1 -8.8454 -3.2002 QISLPDLSQEEPQLK-p Q15390;S124-p QISLPDLSQEEPQLK 0.432652067502024 0.109556277061163 0.105 -0.211333333333333 6.70237002076346 12.6851769911896 0.105 -0.211333333333333 0.213679568457953 0.053886788405089 1.40880733115904 -2.45318206382607 Q15390 MTFR1 Q15390.S124.p_MTFR1 Q15390_S124s _1_1_124_124 Q15390 Q15390 Mitochondrial fission regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27241.27241.3 11.06 10.63 4.81 2 1 1 0 755.072 2183.2324 S124s TMT10 117 (R) QISLPDLsQEEPQLK (T) QIS(0.0)LPDLS(0.99)QEEPQLK K:TMT10,s:Phosphorylated S MTFR1 37171 1 2 2235.1 92.35 HUMAN 1 6.7024 -12.6852 QISVRKNSLVAVPST-p Q13362-4;S39-p QISVRKNSLVAVPST 0.658417455592086 0.336156248036714 0.112 0.099 3.40625637886215 6.27297704947989 0.112 0.099 0.456430189533452 0.235886070111938 0.801785807468571 1.33271930511282 Q13362 PPP2R5C Q13362.4.S39.p_PPP2R5C Q13362-4_S39s _1_1_39_39 Q13362-4 Q13362-4|G3V292 Isoform 4 of Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17178.17178.3 14.43 14.43 6.205 4 1 1 0 723.4281 2088.2996 S39s TMT10 37 (R) KNsLVAVPSTVSAK (I) KNS(0.99)LVAVPS(0.0)T(0.0)VS(0.0)AK K:TMT10,s:Phosphorylated S PPP2R5C 63095.8 1 3 2426.3 83.98 HUMAN 1 3.4063 6.273 QITPVNQSRSSSPTQ-p Q9NYL2;S633-p QITPVNQSRSSSPTQ 0.179741958267991 0.20543308537984 0.297666666666667 -0.173666666666667 14.7138651310225 9.04433124492227 0.297666666666667 -0.173666666666667 0.0337764099341813 0.124614011131053 2.82495662460084 -1.81538067612659 Q9NYL2 ZAK Q9NYL2.S633.p_ZAK Q9NYL2_S633s _1_1_633_633 Q9NYL2 Q9NYL2 Mitogen-activated protein kinase kinase kinase 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10620.10620.2 8.66 8.66 4.317 3 1 1 0 821.9125 1562.8488 S633s TMT10 624 (K) YQQITPVNQsR (S) Y(0.0)QQIT(0.0)PVNQS(0.99)R s:Phosphorylated S MAP3K20 91781 2 6 1239.1 162.96 HUMAN 1 14.7139 -9.0443 QITSSPVSPKSLAFT-p A0A087WZV0;S1031-p QITSSPVSPKSLAFT 0.271101764369523 0.660210308753216 -0.161333333333333 -0.0653333333333333 10.7426422933257 2.46722613622608 -0.161333333333333 -0.0653333333333333 0.0842821820077985 0.566601064842849 -2.11108107261491 -0.60987777203819 A0A087WZV0 PPIP5K2 A0A087WZV0.S1031.p_PPIP5K2 A0A087WZV0_S1031s _1_1_1031_1031 A0A087WZV0 A0A087WZV0|O43314|O43314-2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11099.11695.3 17.97 17.97 2.308 5 1 1 0 618.9913 1774.9951 S1031s TMT10 1021 (R) SGEQITSSPVsPK (S) S(0.0)GEQIT(0.0)S(0.0)S(0.0)PVS(0.99)PK K:TMT10,s:Phosphorylated S PPIP5K2 145671.7 2 6 778.1 226.58 HUMAN 1 -10.7426 -2.4672 QIVAPKGS_______-p Q9H4A4;S650-p QIVAPKGS_______ 0.278015984722801 0.0249128990779079 0.193666666666667 0.421666666666667 10.5216964742015 21.8187271808573 0.193666666666667 0.421666666666667 0.0886809532072507 0.00657850610277052 2.07251096304796 4.27612558626782 Q9H4A4 RNPEP Q9H4A4.S650.p_RNPEP Q9H4A4_S650s _1_1_650_650 Q9H4A4 Q9H4A4|A6NKB8 Aminopeptidase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30760.30760.5 21.32 21.32 12.24 7 1 1 0 683.5578 3333.7843 S650s TMT10 624 (K) ETFASTASQLHSNVVNYVQQIVAPKGs (-) ET(0.0)FAS(0.0)T(0.0)AS(0.0)QLHS(0.0)NVVNY(0.0)VQQIVAPKGS(0.99) K:TMT10,s:Phosphorylated S RNPEP 73279.1 2 3 2733.1 72.39 HUMAN 1 10.5217 21.8187 QIVRGEGSQTFQLIS-p Q9ULM0;S638-p QIVRGEGSQTFQLIS 0.0926681628012438 0.545472240080781 -0.328 -0.0596666666666667 21.9875459966926 3.54017527664806 -0.328 -0.0596666666666666 0.00632769299925129 0.442570510325645 -4.31908196721038 -0.828016914498541 Q9ULM0 PLEKHH1 Q9ULM0.S638.p_PLEKHH1 Q9ULM0_S638s _1_1_638_638 Q9ULM0 Q9ULM0|Q9ULM0-2 Pleckstrin homology domain-containing family H member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20847.20847.2 11.29 11.29 1.112 3 1 1 0 866.9195 1652.8693 S638s Hydrogen 635 (R) GEGsQTFQLISEK (K) GEGS(0.99)QT(0.0)FQLIS(0.0)EK K:TMT10-Lys-Only,s:Phosphorylated S PLEKHH1 152827.1 5 15 981.1 192.43 HUMAN 1 -21.9875 -3.5402 QKAALEDSSGSSELQ-p Q12929;S787-p QKAALEDSSGSSELQ 0.17776892686696 0.81444243676221 -0.231666666666667 -0.038 14.8666944374954 1.24736919681893 -0.231666666666667 -0.038 0.0326084800765873 0.750348606477248 -2.85348679451647 -0.334792792410376 Q12929 EPS8 Q12929.S787.p_EPS8 Q12929_S787s _1_1_787_787 Q12929 Q12929|Q12929-2 Epidermal growth factor receptor kinase substrate 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20513.20513.3 14.74 14.74 1.344 4 1 1 0 763.3638 2208.1128 S787s TMT10 782 (K) AALEDsSGSSELQEIMRR (R) AALEDS(0.99)S(0.0)GS(0.0)S(0.0)ELQEIMRR s:Phosphorylated S EPS8 92222.2 3 8 994.1 191.04 HUMAN 1 -14.8667 -1.2474 QKALDLDSSCKEAAD-p P31948-2;S506-p QKALDLDSSCKEAAD 0.762123739045549 0.0761838974104376 0.043 0.207333333333333 2.25832646458463 14.8380629690489 0.043 0.207333333333333 0.594521210714335 0.0328241662112556 0.565279621547464 2.84630178312887 P31948 STIP1 P31948.2.S506.p_STIP1 P31948-2_S506s _1_1_506_506 P31948-2 P31948-2|P31948-3 Isoform 2 of Stress-induced-phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15653.15653.2 10.11 4.11 1.151 2 1 1 0 773.8828 1466.7925 S506s TMT10 501 (K) ALDLDsSCK (E) ALDLDS(0.99)S(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S STIP1 68763.9 1 3 1370.1 149.31 HUMAN 1 2.2583 14.8381 QKARSQPSPMLPLPV-p Q9C086;S192-p QKARSQPSPMLPLPV 0.839190159840839 0.00800994240762729 -0.0493333333333333 0.757666666666667 1.47427117583547 29.8756967446354 -0.0493333333333334 0.757666666666667 0.71215230192219 0.0010290354243766 -0.388949421994627 6.38432859731261 Q9C086 INO80B Q9C086.S192.p_INO80B Q9C086_S192s _1_1_192_192 Q9C086 J3KQ70|Q9C086|F8WCL7 INO80 complex subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36523.36523.4 19.1 19.1 1.427 3 1 1 0 860.9447 3360.8022 S192s TMT10 189 (R) SQPsPMLPLPVAEGCPPPALTEEMLLK (R) S(0.0)QPS(0.99)PMLPLPVAEGCPPPALT(0.0)EEMLLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S INO80B 39035.8 1 6 1391.1 147.13 HUMAN 1 -1.4743 29.8757 QKATPPPSPLLSELL-p Q9H0E9-2;S268-p QKATPPPSPLLSELL 0.123464236187627 0.0102370617166021 -0.361333333333333 -0.609 18.8922910627234 27.9421902566592 -0.361333333333333 -0.609 0.0129053828771354 0.00160613103631403 -3.64515336528117 -5.82125110456054 Q9H0E9 BRD8 Q9H0E9.2.S268.p_BRD8 Q9H0E9-2_S268s _1_1_268_268 Q9H0E9-2 Q9H0E9-2|Q9H0E9-4|Q9H0E9-3 Isoform 2 of Bromodomain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32732.32732.3 9.09 8.17 1.309 3 1 1 0 667.7217 1921.1774 S268s TMT10 263 (K) ATPPPsPLLSELLK (K) AT(0.0)PPPS(0.99)PLLS(0.0)ELLK K:TMT10,s:Phosphorylated S BRD8 103294.1 1 3 654.1 253.82 HUMAN 1 -18.8923 -27.9422 QKCHAEHTPEEEIDH-p O95757;T545-p QKCHAEHTPEEEIDH 0.244161971200343 0.0236602460730695 0.305333333333333 0.449 11.7114007519011 22.17276755751 0.305333333333333 0.449 0.0674310503851814 0.00606349807807076 2.28124727508134 4.3568950407141 O95757 HSPA4L O95757.T545.p_HSPA4L O95757_T545t _1_1_545_545 O95757 O95757|E9PDE8 Heat shock 70 kDa protein 4L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5323.5323.4 18.66 18.66 5.201 2 1 1 0 625.5404 2419.1712 T545t TMT10 540 (K) CHAEHtPEEEIDHTGAK (T) CHAEHT(0.99)PEEEIDHT(0.0)GAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T HSPA4L 95537.8 1 1 549.3 274.67 HUMAN 1 11.7114 22.1728 QKCLLAASPENEAGG-p Q9NW13;S397-p QKCLLAASPENEAGG 0.289073375000317 0.164473358372081 0.190666666666667 0.169666666666667 10.1641341531975 10.308139229927 0.190666666666667 0.169666666666667 0.0962911968243034 0.0931506901696141 2.01024114987103 2.03444786781631 Q9NW13 RBM28 Q9NW13.S397.p_RBM28 Q9NW13_S397s _1_1_397_397 Q9NW13 Q9NW13|Q9NW13-2 RNA-binding protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20839.20839.3 11.92 5.62 99 1 1 1 0 837.103 2429.3223 S397s TMT10 392 (K) CLLAAsPENEAGGLKLDGR (Q) CLLAAS(1.0)PENEAGGLKLDGR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RBM28 86249.5 2 4 3296.1 54.56 HUMAN 1 10.1641 10.3081 QKCSGQLSQELPEAF-p Q9NY74;S298-p QKCSGQLSQELPEAF 0.771638354290043 0.0139668836897806 -0.081 -0.372666666666667 2.15713246644001 25.7386995272267 -0.081 -0.372666666666667 0.608536669601292 0.00266765736138362 -0.54332565169448 -5.22655660878247 Q9NY74 ETAA1 Q9NY74.S298.p_ETAA1 Q9NY74_S298s _1_1_298_298 Q9NY74 Q9NY74 Ewing's tumor-associated antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32781.32781.3 21.26 21.26 2.541 7 1 1 0 1052.511 3075.5498 S298s TMT10 293 (K) CSGQLsQELPEAFWSTSNTTFVK (T) CS(0.0)GQLS(0.99)QELPEAFWS(0.0)T(0.0)S(0.0)NT(0.0)T(0.0)FVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ETAA1 104522.7 1 3 2527.1 79.86 HUMAN 1 -2.1571 -25.7387 QKDIKEESDEEEEDD-p Q96EV2;S205-p QKDIKEESDEEEEDD 0.304557287260952 0.00557213836985422 -0.287 0.555333333333333 9.67395541450917 32.6642692003119 -0.287 0.555333333333333 0.107796449960122 0.000541468354638545 -1.92511681526316 7.27261690275673 Q96EV2 RBM33 Q96EV2.S205.p_RBM33 Q96EV2_S205s _1_1_205_205 Q96EV2 Q96EV2|A8MTF7|Q96EV2-2 RNA-binding protein 33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9074.9074.4 16.91 16.91 7.162 2 1 1 0 737.5831 2867.3431 S205s TMT10 200 (K) DIKEEsDEEEEDDEESGRLR (F) DIKEES(0.99)DEEEEDDEES(0.0)GRLR K:TMT10,s:Phosphorylated S RBM33 130268.8 1 3 662.1 251.2 HUMAN 1 -9.674 32.6643 QKDKGQKSPAEQKNL-p Q9H6Z4;S27-p QKDKGQKSPAEQKNL 0.0963882658412096 0.00542648559106668 0.834333333333333 0.828333333333333 21.5445137074886 32.8714081718985 0.834333333333333 0.828333333333333 0.00700726640929032 0.000516248951732424 4.2185411621648 7.34248579871592 Q9H6Z4 RANBP3 Q9H6Z4.S27.p_RANBP3 Q9H6Z4_S27s _1_1_27_27 Q9H6Z4 Q9H6Z4|Q9H6Z4-2|K7EPW1 Ran-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.4956.4956.4 10.9 3.99 99 1 1 1 0 553.8196 2132.2845 S27s TMT10 22 (K) DKGQKsPAEQK (N) DKGQKS(1.0)PAEQK K:TMT10,s:Phosphorylated S RANBP3 60551.2 3 3 444.2 311.24 HUMAN 1 21.5445 32.8714 QKDLEPESDRSAQPL-p Q9UKV3;S522-p QKDLEPESDRSAQPL 0.193139043668323 0.0755547881655142 0.227333333333333 0.412666666666667 13.9421612152193 14.889623716749 0.227333333333333 0.412666666666667 0.0403444573574809 0.0324367720136271 2.68230532036054 2.85592871635577 Q9UKV3 ACIN1 Q9UKV3.S522.p_ACIN1 Q9UKV3_S522s _1_1_522_522 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.31373.31373.4 19.21 19.21 4.318 2 1 1 0 858.2247 3349.9186 S522s TMT10 517 (K) DLEPEsDRSAQPLPLKIEELALAK (G) DLEPES(0.99)DRS(0.0)AQPLPLKIEELALAK K:TMT10,s:Phosphorylated S ACIN1 152258.2 3 15 32.2 899.18 HUMAN 1 13.9422 14.8896 QKDVIIKSDAPDTLL-p P53611;S12-p QKDVIIKSDAPDTLL 0.58471981560589 0.558376301638306 -0.0806666666666667 -0.0636666666666666 4.28744761789598 3.41209415118902 -0.0806666666666667 -0.0636666666666666 0.372610628051879 0.455817069723577 -0.971691955531324 -0.802817533954824 P53611 RABGGTB P53611.S12.p_RABGGTB P53611_S12s _1_1_12_12 P53611 P53611|Q5T4U8 Geranylgeranyl transferase type-2 subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26749.26749.3 13.37 13.37 3.433 2 1 1 0 846.4847 2457.4783 S12s TMT10 7 (K) DVIIKsDAPDTLLLEK (H) DVIIKS(0.99)DAPDT(0.0)LLLEK K:TMT10,s:Phosphorylated S RABGGTB 37608.4 1 2 3657.1 45.92 HUMAN 1 -4.2874 -3.4121 QKEDAVATDSSPEEL-p Q9BQK8-2;T159-p QKEDAVATDSSPEEL 0.772687577994288 0.568662466865634 -0.0526666666666667 -0.0556666666666667 2.14215283287993 3.30317913880534 -0.0526666666666667 -0.0556666666666667 0.610639251051411 0.467392873338792 -0.540057634317981 -0.781230330271157 Q9BQK8 LPIN3 Q9BQK8.2.T159.p_LPIN3 Q9BQK8-2_T159tS161sS162s_3_3_159_162 Q9BQK8-2 Q9BQK8-2 Isoform 2 of Phosphatidate phosphatase LPIN3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26005.26005.3 15.89 13.16 3.49 5 3 3 0 1296.2672 3646.879 T159t S161s S162s TMT10 152 (K) QKEDAVAtDssPEELEAGAESELSLPEK (L) QKEDAVAT(0.99)DS(0.99)S(0.99)PEELEAGAES(0.0)ELS(0.0)LPEK K:TMT10,t:Phosphorylated T,s:Phosphorylated S LPIN3 94213.1 3 10 1554.1 131.9 HUMAN 1 -2.1422 -3.3032 QKEFDEDSEDRLVNE-p Q9UHD8;S482-p QKEFDEDSEDRLVNE 0.0823487704994002 0.113365573525846 0.785666666666667 -0.299333333333333 23.1776568816917 12.4696470181919 0.785666666666667 -0.299333333333333 0.00481098842298427 0.056628531317605 4.59655140872298 -2.41466403667014 Q9UHD8 SEPT9 Q9UHD8.S482.p_SEPT9 Q9UHD8_S482s _1_1_482_482 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2|Q9UHD8-7|Q9UHD8-8|Q9UHD8-3|Q9UHD8-9|Q9UHD8-4 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24915.24915.4 19.06 17.56 2.336 4 1 1 0 998.4974 3910.9962 S482s Hydrogen 461 (R) ITADLLSNGIDVYPQKEFDEDsEDRLVNEK (F) IT(0.0)ADLLS(0.0)NGIDVY(0.0)PQKEFDEDS(0.99)EDRLVNEK K:TMT10-Lys-Only,s:Phosphorylated S SEPT9 65685.6 3 23 110.1 572.91 HUMAN 1 23.1777 -12.4696 QKEFGYDSPHDLDSD-p Q96CW6;S302-p QKEFGYDSPHDLDSD 0.574177467041115 0.12523948406545 0.129333333333333 0.267666666666667 4.435728847864 11.897128600124 0.129333333333333 0.267666666666667 0.360103311553083 0.0646081253683184 0.99955580195182 2.31295883161672 Q96CW6 SLC7A6OS Q96CW6.S302.p_SLC7A6OS Q96CW6_S302sS308s_2_2_302_308 Q96CW6 Q96CW6 Probable RNA polymerase II nuclear localization protein SLC7A6OS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18332.18332.2 12.36 12.36 12.362 3 2 2 0 943.3447 1725.7441 S302s S308s TMT10 297 (K) EFGYDsPHDLDsD (-) EFGY(0.0)DS(0.99)PHDLDS(0.99)D s:Phosphorylated S SLC7A6OS 35255.4 2 6 1926.1 106.59 HUMAN 1 4.4357 11.8971 QKEGRRASHTLLPSH-p Q9UKV3;S561-p QKEGRRASHTLLPSH 0.959071954194787 0.251214564969769 0.00766666666666666 0.244666666666667 0.351820408214259 7.90191102372195 0.00766666666666667 0.244666666666667 0.922184799016692 0.162109661010497 0.102323563258219 1.61763395492773 Q9UKV3 ACIN1 Q9UKV3.S561.p_ACIN1 Q9UKV3_S561s _1_1_561_561 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4504.4504.3 7.27 7.27 1.24 3 1 1 0 528.616 1503.8706 S561s TMT10 559 (R) RAsHTLLPSHR (L) RAS(0.99)HT(0.0)LLPS(0.0)HR s:Phosphorylated S ACIN1 152258.2 4 17 32.2 899.18 HUMAN 1 0.3518 7.9019 QKEKERLSDELLVKS-p Q66GS9;S383-p QKEKERLSDELLVKS 0.168752044631179 0.00312254418097847 -0.563333333333333 0.875666666666667 15.4128696569993 37.6401122720657 -0.563333333333333 0.875666666666667 0.0287549776450015 0.000172182406250634 -2.95624987454101 9.11893238603485 Q66GS9 CEP135 Q66GS9.S383.p_CEP135 Q66GS9_S383s _1_1_383_383 Q66GS9 Q66GS9 Centrosomal protein of 135 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18369.18369.3 11.58 5.19 99 1 1 1 0 580.6616 1660.0045 S383s TMT10 380 (K) ERLsDELLVK (S) ERLS(1.0)DELLVK K:TMT10,s:Phosphorylated S CEP135 133944.3 1 4 2135.1 96.32 HUMAN 1 -15.4129 37.6401 QKENKQLSLKVDELE-p Q5BJF6-4;S658-p QKENKQLSLKVDELE 0.563957418067227 0.119736570141193 0.0836666666666667 -0.291333333333333 4.5818163843823 12.1533107204937 0.0836666666666667 -0.291333333333333 0.348191657609771 0.0609072411184738 1.02683409490356 -2.35836303091922 Q5BJF6 ODF2 Q5BJF6.4.S658.p_ODF2 Q5BJF6-4_S658s _1_1_658_658 Q5BJF6-4 Q5BJF6|Q5BJF6-4|Q5BJF6-3|Q5BJF6-2 Isoform 4 of Outer dense fiber protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19885.19885.3 11.68 11.68 99 1 1 1 0 623.3498 1788.0631 S658s TMT10 656 (K) QLsLKVDELER (K) QLS(1.0)LKVDELER K:TMT10,s:Phosphorylated S ODF2 96031.2 1 11 853.1 211.96 HUMAN 1 4.5818 -12.1533 QKERKSKSPPKVPIV-p Q7Z422-5;S38-p QKERKSKSPPKVPIV 0.102728705875057 0.019380298893346 -0.319666666666667 -0.346666666666667 20.8658258354989 23.5285757182311 -0.319666666666667 -0.346666666666667 0.00819251823003943 0.00443754150574043 -4.06727925385613 -4.67511332609811 Q7Z422 SZRD1 Q7Z422.5.S38.p_SZRD1 Q7Z422-5_S36sS38s_2_2_36_38 Q7Z422-5 Q7Z422|Q7Z422-5|Q7Z422-3|Q7Z422-4|Q7Z422-2 Isoform 5 of SUZ domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25403.25403.4 18.71 18.71 3.849 3 2 2 0 871.7287 3323.9658 S36s S38s TMT10 36 (K) sKsPPKVPIVIQDDSLPAGPPPQIR (I) S(0.99)KS(0.99)PPKVPIVIQDDS(0.0)LPAGPPPQIR K:TMT10,s:Phosphorylated S SZRD1 16909.7 10 6 1816.1 112.97 HUMAN 1 -20.8658 -23.5286 QKEYLSQSCPSVSNV-p Q5THJ4;S1709-p QKEYLSQSCPSVSNV 0.351202113945675 0.170600118822907 -0.172333333333333 -0.221 8.44470334754904 10.0969628944887 -0.172333333333333 -0.221 0.143063769969592 0.0977920860904206 -1.71223101632793 -1.99774466847865 Q5THJ4 VPS13D Q5THJ4.S1709.p_VPS13D Q5THJ4_S1709s _1_1_1709_1709 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20708.20708.3 12.53 12.53 2.566 6 1 1 0 889.7297 2587.2006 S1709s TMT10 1704 (K) EYLSQsCPSVSNVEYPDMPR (S) EY(0.0)LS(0.0)QS(0.99)CPS(0.0)VS(0.0)NVEY(0.0)PDMPR C:Carbamidomethylation,s:Phosphorylated S VPS13D 495672.3 1 12 124.1 545.31 HUMAN 1 -8.4447 -10.097 QKFQGAGSNKKVAKA-p Q12906-7;S575-p QKFQGAGSNKKVAKA 0.828102470990375 0.0115864077268657 -0.0523333333333333 0.620666666666667 1.57354465333942 27.0806930608279 -0.0523333333333334 0.620666666666667 0.696058168858422 0.001958532099838 -0.412142975182637 5.58306330526475 Q12906 ILF3 Q12906.7.S575.p_ILF3 Q12906-7_S575s _1_1_575_575 Q12906-7 Q12906-7|Q12906-3|Q12906-6|Q12906-2|Q12906-4|Q12906-5 Isoform 7 of Interleukin enhancer-binding factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9125.9125.2 8.52 8.52 99 1 1 1 0 673.8466 1266.7207 S575s TMT10 570 (K) FQGAGsNK (K) FQGAGS(1.0)NK K:TMT10,s:Phosphorylated S ILF3 96205.6 2 12 130.1 537.24 HUMAN 1 -1.5735 27.0807 QKGELGMSPPGSKIP-p Q14781;S302-p QKGELGMSPPGSKIP 0.316140239892734 0.161084010380895 0.192333333333333 0.322666666666667 9.36148392796157 10.4280295026665 0.192333333333333 0.322666666666667 0.115838148458583 0.0906143646559807 1.87095767508633 2.05531037396537 Q14781 CBX2 Q14781.S302.p_CBX2 Q14781_S302s_1_1_302_302 Q14781 Q14781 Chromobox protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5265.5265.2 8.88 5.76 8.35 2 1 1 0 807.4012 1517.8398 M301m S302s TMT10 297 (K) GELGmsPPGSK (I) GELGM(1.0)S(0.99)PPGS(0.0)K K:TMT10,m:Oxidized methionine,s:Phosphorylated S CBX2 56422 1 3 4998.1 24.02 HUMAN 1 9.3615 10.428 QKGELSRSPSPFTHT-p P38398;S1189-p QKGELSRSPSPFTHT 0.973975949589991 0.00542252106697309 0.00833333333333332 -0.586333333333333 0.224410368912843 32.8777215461527 0.00833333333333334 -0.586333333333333 0.949639920759638 0.000515499021648538 0.0661417872288606 -7.3446241731527 P38398 BRCA1 P38398.S1189.p_BRCA1 P38398_S1189sS1191s_2_2_1189_1191 P38398 P38398-7|P38398-4|P38398-8|Q5YLB2 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12348.12348.4 12.25 12.25 1.184 6 2 2 0 658.3082 2470.2789 S1189s S1191s TMT10 1184 (K) GELSRsPsPFTHTHLAQGYR (R) GELS(0.0)RS(0.99)PS(0.99)PFT(0.0)HT(0.0)HLAQGY(0.0)R s:Phosphorylated S BRCA1 210227.6 8 25 106.1 588.91 HUMAN 1 0.2244 -32.8777 QKGICPKSPSAIPEQ-p Q13129;S632-p QKGICPKSPSAIPEQ 0.137301954068809 0.0970217463108242 -0.345333333333333 0.326 17.6860828432831 13.3975170960487 -0.345333333333333 0.326 0.0170369447759931 0.0457349586109578 -3.39901086495637 2.58148174522183 Q13129 RLF Q13129.S632.p_RLF Q13129_S632s _1_1_632_632 Q13129 Q13129 Zinc finger protein Rlf HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10200.10200.3 17.33 17.33 2 3 1 1 0 792.0657 2294.2141 S632s TMT10 632 (K) sPSAIPEQNHSLNDQAK (G) S(0.99)PS(0.0)AIPEQNHS(0.0)LNDQAK K:TMT10,s:Phosphorylated S RLF 223026.9 4 1 3780.1 43.31 HUMAN 1 -17.6861 13.3975 QKGPASDSETEDASR-p Q96ST2;S315-p QKGPASDSETEDASR 0.0768338580443976 0.342521847218527 -0.356666666666667 -0.140333333333333 23.8581345782686 6.16314396817188 -0.356666666666667 -0.140333333333333 0.00411326359859481 0.241927703649459 -4.76027011679542 -1.31325429587101 Q96ST2 IWS1 Q96ST2.S315.p_IWS1 Q96ST2_S313sS315s_2_2_313_315 Q96ST2 Q96ST2|Q96ST2-3 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9141.9141.4 14.08 14.08 1.324 7 2 2 0 771.5816 2923.3805 S313s S315s TMT10 299 (R) VSDSESEGPQKGPAsDsETEDASR (H) VS(0.0)DS(0.0)ES(0.0)EGPQKGPAS(0.99)DS(0.99)ET(0.0)EDAS(0.0)R K:TMT10,s:Phosphorylated S IWS1 92010 1 14 230.1 422.87 HUMAN 1 -23.8581 -6.1631 QKGSHQISLDNPDYQ-p P00533;S1166-p QKGSHQISLDNPDYQ 0.175973502111451 0.0270208544130465 -0.309 -0.363333333333333 14.9969401768127 21.2850677137845 -0.309 -0.363333333333333 0.0316450642897189 0.00743863464739701 -2.87787731936243 -4.15611722198696 P00533 EGFR P00533.S1166.p_EGFR P00533_S1166s _1_1_1166_1166 P00533 P00533|E9PFD7 Epidermal growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22258.22258.3 19.34 19.34 4.326 3 1 1 0 925.4464 2694.3564 S1166s TMT10 1161 (K) GSHQIsLDNPDYQQDFFPK (E) GS(0.0)HQIS(0.99)LDNPDY(0.0)QQDFFPK K:TMT10,s:Phosphorylated S EGFR 137698.3 3 8 521.2 283.33 HUMAN 1 -14.9969 -21.2851 QKGSLGISQEEQ___-p Q9NZD8;S304-p QKGSLGISQEEQ___ 0.0803722793397041 0.0460080708125585 0.369666666666667 0.239666666666667 23.3769689760452 17.8919864695777 0.369666666666667 0.239666666666667 0.00459518607742816 0.0162480539729232 4.64411235797136 3.43764531210656 Q9NZD8 SPG21 Q9NZD8.S304.p_SPG21 Q9NZD8_S304s _1_1_304_304 Q9NZD8 Q9NZD8 Maspardin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29741.29741.3 17.08 17.08 1.387 5 1 1 0 1182.9197 3466.7664 S304s TMT10 281 (K) YAAIDPSMVSAEELEVQKGSLGIsQEEQ (-) Y(0.0)AAIDPS(0.0)MVS(0.0)AEELEVQKGS(0.0)LGIS(0.99)QEEQ K:TMT10,s:Phosphorylated S SPG21 35244.8 2 3 4418.1 31.74 HUMAN 1 23.377 17.892 QKHAAFVTPDQKYSM-p P10244;T505-p QKHAAFVTPDQKYSM 0.372455128772376 0.00189135805848686 0.153 -1.381 7.9586796048972 42.7594687901364 0.153 -1.381 0.160004441970956 5.29728233951334e-05 1.62799178537582 -11.4449692060924 P10244 MYBL2 P10244.T505.p_MYBL2 P10244_T505t _1_1_505_505 P10244 P10244|P10244-2 Myb-related protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9665.9665.3 13.9 13.9 99 1 1 1 0 551.2919 1571.8946 T505t TMT10 500 (K) HAAFVtPDQK (Y) HAAFVT(1.0)PDQK K:TMT10,t:Phosphorylated T MYBL2 79390.3 1 11 752.1 231.53 HUMAN 1 7.9587 -42.7595 QKHALGGSLEHLPRA-p Q96PX6;S347-p QKHALGGSLEHLPRA 0.783222525456911 0.0169961888261017 -0.0436666666666667 0.606333333333333 2.04078786899263 24.4148755980991 -0.0436666666666667 0.606333333333333 0.625059288271392 0.00361836555246018 -0.517815977655777 4.8911735887561 Q96PX6 CCDC85A Q96PX6.S347.p_CCDC85A Q96PX6_S347s _1_1_347_347 Q96PX6 Q96PX6 Coiled-coil domain-containing protein 85A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10046.10046.3 13.09 13.09 99 1 1 1 0 532.6135 1515.8593 S347s TMT10 342 (K) HALGGsLEHLPR (A) HALGGS(1.0)LEHLPR s:Phosphorylated S CCDC85A 60659.2 2 5 1994.1 103.61 HUMAN 1 -2.0408 24.4149 QKIDDRDSDEEGASD-p Q8TDD1-2;S782-p QKIDDRDSDEEGASD 0.767491684982091 0.920501077507358 0.06 -0.00999999999999997 2.2013240434699 0.506061037821006 0.06 -0.00999999999999997 0.60237591036239 0.890007970940466 0.552939087612673 -0.14492111659268 Q8TDD1 DDX54 Q8TDD1.2.S782.p_DDX54 Q8TDD1-2_S782s _1_1_782_782 Q8TDD1-2 Q8TDD1-2 Isoform 2 of ATP-dependent RNA helicase DDX54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4698.4698.3 14.99 14.99 4.941 2 1 1 0 792.0358 2294.1261 S782s TMT10 775 (K) QKIDDRDsDEEGASDR (R) QKIDDRDS(0.99)DEEGAS(0.0)DR K:TMT10,s:Phosphorylated S DDX54 98949.4 18 6 373.1 338.92 HUMAN 1 2.2013 -0.5061 QKIEMWDSMQEGKSY-p Q9BQE4;S121-p QKIEMWDSMQEGKSY 0.858115471854467 0.987146937784378 0.0496666666666667 -0.00233333333333332 1.29521869094811 0.0846508898458941 0.0496666666666667 -0.00233333333333332 0.742126826666393 0.980697145065907 0.346375151692421 -0.0253309524049406 Q9BQE4 VIMP Q9BQE4.S121.p_VIMP Q9BQE4_S121s _1_1_121_121 Q9BQE4 Q9BQE4|A0A182DWI4 Selenoprotein S HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19209.19209.3 15.09 15.09 99 1 1 1 0 793.0689 2297.2237 S121s TMT10 114 (R) QKIEMWDsMQEGK (S) QKIEMWDS(1.0)MQEGK K:TMT10,s:Phosphorylated S SELENOS 21263.1 2 1 3226.1 56.68 HUMAN 1 1.2952 -0.0847 QKIIRLKSLNANTDI-p Q92845;S60-p QKIIRLKSLNANTDI 0.43497101841619 0.039304456387338 0.151333333333333 -0.357666666666667 6.65908665254221 18.8647340098193 0.151333333333333 -0.357666666666667 0.215819824352076 0.0129875310547865 1.40119599575569 -3.63627572274741 Q92845 KIFAP3 Q92845.S60.p_KIFAP3 Q92845_S60s _1_1_60_60 Q92845 Q92845|Q92845-3|Q92845-2 Kinesin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20961.20961.3 14.52 14.52 3.214 4 1 1 0 719.0679 2075.2225 S60s TMT10 58 (R) LKsLNANTDITSLAR (K) LKS(0.99)LNANT(0.0)DIT(0.0)S(0.0)LAR K:TMT10,s:Phosphorylated S KIFAP3 92002.3 3 1 3725.1 44.47 HUMAN 1 6.6591 -18.8647 QKIPPMLSPVHVQDS-p Q5VWG9;S229-p QKIPPMLSPVHVQDS 0.710006345111001 0.0523931863384115 -0.0586666666666667 0.231333333333333 2.79669213012443 17.0859656766841 -0.0586666666666667 0.231333333333333 0.525207340089808 0.0195615575802429 -0.678806751502801 3.2770728001001 Q5VWG9 TAF3 Q5VWG9.S229.p_TAF3 Q5VWG9_S229sS243s_2_2_229_243 Q5VWG9 Q5VWG9 Transcription initiation factor TFIID subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34548.34745.5 25.55 25.55 3.28 4 2 2 0 770.7929 3690.0051 S229s S243s TMT10 224 (K) IPPMLsPVHVQDSTDLAPPsPEPPMLAPVAK (S) IPPMLS(0.99)PVHVQDS(0.0)T(0.0)DLAPPS(0.99)PEPPMLAPVAK K:TMT10,s:Phosphorylated S TAF3 104321.6 13 13 699.1 240.69 HUMAN 1 -2.7967 17.086 QKIPTYNTPLKVTSI-p Q02241;T738-p QKIPTYNTPLKVTSI 0.258916476664751 0.0117571471372654 -0.275333333333333 -0.435666666666667 11.1527224314918 26.9722639201145 -0.275333333333333 -0.435666666666667 0.0766880609562126 0.00200804577183143 -2.18288686853048 -5.55361247589766 Q02241 KIF23 Q02241.T738.p_KIF23 Q02241_T738t _1_1_738_738 Q02241 Q02241|H7BYN4 Kinesin-like protein KIF23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19164.19164.3 8.04 5.29 3.981 3 1 1 0 528.9665 1504.9139 T738t TMT10 733 (K) IPTYNtPLK (V) IPT(0.0)Y(0.0)NT(0.99)PLK K:TMT10,t:Phosphorylated T KIF23 111083.9 2 10 352.1 350.35 HUMAN 1 -11.1527 -26.9723 QKKKKKSSPQSTDTA-p Q9UGU5;S102-p QKKKKKSSPQSTDTA 0.978285408779534 0.037574935637238 -0.00433333333333335 0.364333333333333 0.188685573808787 19.1457883516255 -0.00433333333333335 0.364333333333333 0.957483817406101 0.0121736599082733 -0.0558259331762135 3.69470771999267 Q9UGU5 HMGXB4 Q9UGU5.S102.p_HMGXB4 Q9UGU5_S102s _1_1_102_102 Q9UGU5 Q9UGU5 HMG domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22905.22905.2 7.15 3.93 1.172 5 1 1 0 1016.5047 1952.0411 S102s TMT10 101 (K) SsPQSTDTAMDLLK (A) S(0.0)S(0.99)PQS(0.0)T(0.0)DT(0.0)AMDLLK K:TMT10,s:Phosphorylated S HMGXB4 66052.7 9 1 1005.1 189.25 HUMAN 1 -0.1887 19.1458 QKKMANSSPVLSKVP-p Q9NXE8;S218-p QKKMANSSPVLSKVP 0.928050324896797 0.018662450602294 -0.02 -0.451 0.642907690298502 23.7905467998137 -0.02 -0.451 0.862400959370642 0.00417777762896399 -0.181739788616904 -4.73829361469463 Q9NXE8 CWC25 Q9NXE8.S218.p_CWC25 Q9NXE8_S218s _1_1_218_218 Q9NXE8 Q9NXE8 Pre-mRNA-splicing factor CWC25 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14032.14032.2 11.61 11.61 1.342 3 1 1 0 786.4168 1491.8605 S218s TMT10 214 (K) MANSsPVLSK (V) MANS(0.0)S(0.99)PVLS(0.0)K K:TMT10,s:Phosphorylated S CWC25 49703.7 18 13 1099.2 177.93 HUMAN 1 -0.6429 -23.7905 QKKQEAESAVRLMQE-p Q9NVH1;S440-p QKKQEAESAVRLMQE 0.675953190261373 0.0194108496572423 0.073 -0.336666666666667 3.18721151370973 23.5158174131739 0.073 -0.336666666666667 0.480041571293595 0.0044505968753143 0.758187196628477 -4.67205074661188 Q9NVH1 DNAJC11 Q9NVH1.S440.p_DNAJC11 Q9NVH1_S440s _1_1_440_440 Q9NVH1 Q9NVH1|Q9NVH1-2|Q9NVH1-3 DnaJ homolog subfamily C member 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5073.5073.2 8.01 3.78 99 1 1 1 0 778.4139 1475.8582 S440s TMT10 435 (K) KQEAEsAVR (L) KQEAES(1.0)AVR K:TMT10,s:Phosphorylated S DNAJC11 63562.2 1 4 3038.1 62.48 HUMAN 1 3.1872 -23.5158 QKKQRPKSIHRDHIE-p Q08AD1;S1268-p QKKQRPKSIHRDHIE 0.0608573372886033 0.443820023099049 -0.563666666666667 -0.106 26.5397286254962 4.6977441688685 -0.563666666666667 -0.106 0.0022183350309927 0.339020205750678 -5.44461358682095 -1.04816406100041 Q08AD1 CAMSAP2 Q08AD1.S1268.p_CAMSAP2 Q08AD1_S1268s _1_1_1268_1268 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4905.4905.4 9.89 8.19 5.009 2 1 1 0 465.0001 1777.0121 S1268s TMT10 1268 (K) sIHRDHIESPK (T) S(0.99)IHRDHIES(0.0)PK K:TMT10,s:Phosphorylated S CAMSAP2 169284 2 23 28.2 931.95 HUMAN 1 -26.5397 -4.6977 QKKRQIDSSEEDDDE-p O14646;S215-p QKKRQIDSSEEDDDE 0.682205479656831 0.56139328956448 -0.0663333333333333 -0.0553333333333333 3.11270522529442 3.37959157009633 -0.0663333333333334 -0.0553333333333333 0.488348072009673 0.459241199897093 -0.743212492930451 -0.79639105620856 O14646 CHD1 O14646.S215.p_CHD1 O14646_S215sS216s_2_2_215_216 O14646 O14646|O14646-2 Chromodomain-helicase-DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.10572.10982.3 13.33 13.33 13.328 3 2 2 0 896.9893 2546.0488 Q212q S215s S216s Hydrogen 212 (R) qIDssEEDDDEEDYDNDKR (S) Q(1.0)IDS(0.99)S(0.99)EEDDDEEDY(0.0)DNDKR K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S CHD1 197825.1 10 13 848.1 212.75 HUMAN 1 -3.1127 -3.3796 QKKSKNGSDDQDKKV-p Q86UP2;S174-p QKKSKNGSDDQDKKV 0.505955843363506 0.86735595595844 0.150666666666667 -0.0406666666666666 5.46080282285721 0.870101900690192 0.150666666666667 -0.0406666666666666 0.28439353380835 0.818445584310694 1.18787255906467 -0.240946432875915 Q86UP2 KTN1 Q86UP2.S174.p_KTN1 Q86UP2_S174s_1_1_174_174 Q86UP2 Q86UP2|Q86UP2-4|Q86UP2-3|Q86UP2-2 Kinectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17116.17116.5 16.8 10.49 1.241 4 1 1 0 687.3805 3351.9166 N172n S174s TMT10 170 (K) SKnGsDDQDKKVETLMVPSK (R) S(0.0)KN(1.0)GS(0.99)DDQDKKVET(0.0)LMVPS(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S KTN1 156557.7 1 5 186.1 473.59 HUMAN 1 5.4608 -0.8701 QKLADPVTPVETILQ-p Q9NVN8;T333-p QKLADPVTPVETILQ 0.177540019132473 0.0511022465675881 0.321333333333333 0.231333333333333 14.8795536065065 17.2466595693263 0.321333333333333 0.231333333333333 0.0325120713493318 0.0188509847923385 2.85589172897925 3.30880835206774 Q9NVN8 GNL3L Q9NVN8.T333.p_GNL3L Q9NVN8_T333t _1_1_333_333 Q9NVN8 Q9NVN8 Guanine nucleotide-binding protein-like 3-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28867.28867.3 14.71 14.71 5.036 2 1 1 0 621.0058 1781.037 T333t TMT10 328 (K) LADPVtPVETILQR (C) LADPVT(0.99)PVET(0.0)ILQR t:Phosphorylated T GNL3L 66256.7 1 2 3327.1 53.86 HUMAN 1 14.8796 17.2467 QKLAPVPSPEPQKPA-p Q96JM3;S204-p QKLAPVPSPEPQKPA 0.927009780314305 0.00465825691177738 -0.0143333333333333 0.548666666666667 0.649919517116868 34.1104818724196 -0.0143333333333333 0.548666666666667 0.861009708155609 0.000388107301068638 -0.183601784821523 7.77242338467546 Q96JM3 CHAMP1 Q96JM3.S204.p_CHAMP1 Q96JM3_S204s _1_1_204_204 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20459.20459.4 20.53 20.53 5.988 3 1 1 0 731.1669 2841.6693 S204s TMT10 199 (K) LAPVPsPEPQKPAPVSPESVK (A) LAPVPS(0.99)PEPQKPAPVS(0.0)PES(0.0)VK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 6 4 25.1 950.05 HUMAN 1 -0.6499 34.1105 QKLARHGSFNTVQAS-p Q96AV8;S410-p QKLARHGSFNTVQAS 0.260789944862731 0.00357177115283079 0.199666666666667 -0.895 11.0565896687008 36.4715287072024 0.199666666666667 -0.895 0.0784045078611141 0.00022534458644519 2.16602634553987 -8.652045686631 Q96AV8 E2F7 Q96AV8.S410.p_E2F7 Q96AV8_S410s _1_1_410_410 Q96AV8 Q96AV8|Q96AV8-3 Transcription factor E2F7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5693.5693.3 10.96 10.96 1.635 3 1 1 0 547.9255 1561.792 S410s TMT10 408 (R) HGsFNTVQASER (I) HGS(0.99)FNT(0.0)VQAS(0.0)ER s:Phosphorylated S E2F7 100342.7 1 3 2042.1 101.08 HUMAN 1 11.0566 -36.4715 QKLERCHSAELALNV-p D6RHI7;S208-p QKLERCHSAELALNV 0.799050924192311 0.149054335510615 0.0366666666666667 -0.176333333333333 1.87739554616208 10.8813519535748 0.0366666666666667 -0.176333333333333 0.649023534758985 0.0816328209796369 0.481475897881466 -2.13438558679546 D6RHI7 NotFound D6RHI7.S208.p_NotFound D6RHI7_S208s _1_1_208_208 D6RHI7 P51946|D6RG18|D6RHI7 Cyclin-H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20395.20395.3 17.61 17.61 17.612 2 1 1 0 665.3567 1914.0883 S208s TMT10 206 (R) CHsAELALNVITK (K) CHS(0.99)AELALNVIT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCNH 29154.1 1 1 2849.1 68.11 HUMAN 1 1.8774 -10.8814 QKLFDRNSLPVPVLE-p Q9Y6W5;S115-p QKLFDRNSLPVPVLE 0.478270607126848 0.762136347620724 0.100666666666667 -0.0416666666666667 5.8942934950137 1.63024520672088 0.100666666666667 -0.0416666666666666 0.257377542903081 0.687029648583483 1.26570989197092 -0.425219441583706 Q9Y6W5 WASF2 Q9Y6W5.S115.p_WASF2 Q9Y6W5_S115s_1_1_115_115 Q9Y6W5 Q9Y6W5|Q9Y6W5-2 Wiskott-Aldrich syndrome protein family member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31645.31645.4 17.07 13.45 3.824 7 1 1 0 1143.5792 4490.3066 S115s N125n TMT10 110 (K) LFDRNsLPVPVLETYnTCDTPPPLNNLTPYRDDGK (E) LFDRN(0.0)S(0.99)LPVPVLET(0.0)Y(0.0)N(0.99)T(0.0)CDT(0.0)PPPLN(0.0)N(0.0)LT(0.0)PY(0.0)RDDGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated WASF2 54511.2 2 2 1819.1 112.9 HUMAN 1 5.8943 -1.6302 QKLHPDGSPDVAGEK-p Q7Z2Z1;S599-p QKLHPDGSPDVAGEK 0.776421298656251 0.00123467326444358 -0.0483333333333333 -1.06133333333333 2.10820293149748 47.6900656687614 -0.0483333333333333 -1.06133333333333 0.615431479614802 1.70213277060628e-05 -0.532633217566978 -14.1966368704108 Q7Z2Z1 TICRR Q7Z2Z1.S599.p_TICRR Q7Z2Z1_S599s _1_1_599_599 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10344.10344.2 12.54 12.54 99 1 1 1 0 930.4698 1779.9641 S599s TMT10 594 (K) LHPDGsPDVAGEK (G) LHPDGS(1.0)PDVAGEK K:TMT10,s:Phosphorylated S TICRR 212850 4 4 238.1 417.32 HUMAN 1 -2.1082 -47.6901 QKLKKSRSVQSREEN-p Q15751;S2260-p QKLKKSRSVQSREEN 0.933823326424321 0.0143523413869905 -0.0286666666666667 0.417666666666667 0.585252536013972 25.5558247790921 -0.0286666666666667 0.417666666666667 0.873926173559188 0.00278238691388528 -0.166342662991116 5.17928908368664 Q15751 HERC1 Q15751.S2260.p_HERC1 Q15751_S2260s _1_1_2260_2260 Q15751 Q15751 Probable E3 ubiquitin-protein ligase HERC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4678.4678.3 7.63 7.63 7.634 2 1 1 0 687.3152 1979.9654 S2260s Hydrogen 2260 (R) sVQSREENEMREEK (E) S(0.99)VQS(0.0)REENEMREEK K:TMT10-Lys-Only,s:Phosphorylated S HERC1 539122.1 1 12 269.1 394.57 HUMAN 1 -0.5853 25.5558 QKLLRPNSLRLASDS-p Q8WXG6;S813-p QKLLRPNSLRLASDS 0.841988968990361 0.050124945718593 0.044 -0.496 1.44510175592958 17.3722201657595 0.044 -0.496 0.716951577087255 0.018313779605298 0.382080127347465 -3.33370006126747 Q8WXG6 MADD Q8WXG6.S813.p_MADD Q8WXG6_S813s _1_1_813_813 Q8WXG6 Q8WXG6|Q8WXG6-2|A0A0A0MRB5|Q8WXG6-3 MAP kinase-activating death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11822.11822.3 10.62 3.79 99 1 1 1 0 426.5816 1197.7629 S813s TMT10 808 (K) LLRPNsLR (L) LLRPNS(1.0)LR s:Phosphorylated S MADD 184612.2 2 4 546.1 275.73 HUMAN 1 1.4451 -17.3722 QKMKDIKTIFSEFIT-p A1XBS5;T182-p QKMKDIKTIFSEFIT 0.297330507583042 0.37236988138142 -0.266333333333333 0.139666666666667 9.91190048015742 5.69087123369083 -0.266333333333333 0.139666666666667 0.102049281656371 0.269719829599385 -1.96640854285393 1.22901446031545 A1XBS5 FAM92A1 A1XBS5.T182.p_FAM92A1 A1XBS5_T182tT189t_2_2_182_189 A1XBS5 A1XBS5|A0A087WTS3|A1XBS5-3|A1XBS5-4|E5RFH7|E5RGP4 Protein FAM92A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14562.15272.4 7.21 7.21 1.127 3 2 2 0 722.6201 2727.5196 T182t T189t Hydrogen 179 (K) DIKtIFSEFItIEMLFHGK (A) DIKT(0.99)IFS(0.0)EFIT(0.99)IEMLFHGK K:TMT10-Lys-Only,t:Phosphorylated T FAM92A 33601.2 2 2 5955.1 15.03 HUMAN 1 -9.9119 5.6909 QKMQQKKSQDLESVQ-p Q9H583;S1190-p QKMQQKKSQDLESVQ 0.481005429235313 0.866949400156831 -0.152 -0.0246666666666667 5.85003045703955 0.873331770328026 -0.152 -0.0246666666666667 0.260014132832963 0.817837128547404 -1.25780131712828 -0.241772674127405 Q9H583 HEATR1 Q9H583.S1190.p_HEATR1 Q9H583_S1190s _1_1_1190_1190 Q9H583 Q9H583|Q5T3Q7 HEAT repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19085.19085.3 12.08 12.08 2.721 4 1 1 0 878.7717 2554.3302 S1190s TMT10 1189 (K) KsQDLESVQEVGGSYWQR (V) KS(0.99)QDLES(0.0)VQEVGGS(0.0)Y(0.0)WQR K:TMT10,s:Phosphorylated S HEATR1 244533.8 1 1 6361.1 12.08 HUMAN 1 -5.85 -0.8733 QKNFTPPSPFANKLQ-p Q9NPG3;S821-p QKNFTPPSPFANKLQ 0.893317056675265 0.00159168462790637 -0.033 -0.859666666666667 0.95714953704893 44.8144862320173 -0.033 -0.859666666666667 0.802204412167231 3.30028447785387e-05 -0.263095030121178 -12.5242752435539 Q9NPG3 UBN1 Q9NPG3.S821.p_UBN1 Q9NPG3_S821s _1_1_821_821 Q9NPG3 Q9NPG3|Q9NPG3-2 Ubinuclein-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21503.21503.3 8.67 8.67 3.42 2 1 1 0 586.6391 1677.9365 S821s TMT10 816 (K) NFTPPsPFANK (L) NFT(0.0)PPS(0.99)PFANK K:TMT10,s:Phosphorylated S UBN1 122088.8 1 5 1087.1 179.43 HUMAN 1 -0.9571 -44.8145 QKNIIGSSPVADFSA-p P42566;S324-p QKNIIGSSPVADFSA 0.56955442138755 0.0245661831669215 -0.0786666666666667 0.320333333333333 4.49858856341779 21.9091961292832 -0.0786666666666667 0.320333333333333 0.354928720651629 0.00644288511040572 -1.0113137959112 4.29667617675987 P42566 EPS15 P42566.S324.p_EPS15 P42566_S324s _1_1_324_324 P42566 P42566|B1AUU8 Epidermal growth factor receptor substrate 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28578.28578.2 15.31 14.84 1.141 3 1 1 0 1029.0583 1977.1421 S324s TMT10 319 (K) NIIGSsPVADFSAIK (E) NIIGS(0.0)S(0.99)PVADFS(0.0)AIK K:TMT10,s:Phosphorylated S EPS15 99281.5 5 5 342.1 353.17 HUMAN 1 -4.4986 21.9092 QKNPPNQSSNERPPS-p O15042;S174-p QKNPPNQSSNERPPS 0.546775061594564 0.951355590623355 0.176 0.011 4.84039313339666 0.309921376312675 0.176 0.011 0.328065594513542 0.931124732186067 1.07472649774015 0.0905190435805065 O15042 U2SURP O15042.S174.p_U2SURP O15042_S174s _1_1_174_174 O15042 O15042|O15042-2|E7ET15|E7EW00 U2 snRNP-associated SURP motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21385.21385.4 11.49 11.49 1.119 4 1 1 0 894.9827 3496.9367 S174s TMT10 164 (R) FADQKNPPNQsSNERPPSLLVIETK (K) FADQKNPPNQS(0.99)S(0.0)NERPPS(0.0)LLVIET(0.0)K K:TMT10,s:Phosphorylated S U2SURP 118746.2 3 5 360.1 345.29 HUMAN 1 4.8404 0.3099 QKNRRRLSDCESTDV-p Q7Z333-4;S1366-p QKNRRRLSDCESTDV 0.110850218289676 0.030879695719171 -0.317 -0.291666666666667 19.9878609024204 20.413239028654 -0.317 -0.291666666666667 0.0100279904053236 0.0090923489965858 -3.87634567102923 -3.96439465108644 Q7Z333 SETX Q7Z333.4.S1366.p_SETX Q7Z333-4_S1366s _1_1_1366_1366 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5978.5978.3 12.67 11.71 4.271 3 1 1 0 540.2501 1538.7682 S1366s Hydrogen 1364 (R) RLsDCESTDVK (R) RLS(0.99)DCES(0.0)T(0.0)DVK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S SETX 310728.6 7 11 192.1 463.82 HUMAN 1 -19.9879 -20.4132 QKPFWRHTVRMNLDF-p Q96PF1;T550-p QKPFWRHTVRMNLDF 0.332256356782789 0.741251885015411 0.149333333333333 0.0376666666666667 8.93496841499833 1.79261610337758 0.149333333333333 0.0376666666666667 0.127791850347007 0.661817717804346 1.79710547516591 0.462317632634528 Q96PF1 TGM7 Q96PF1.T550.p_TGM7 Q96PF1_T542tT550t_2_2_542_550 Q96PF1 Q96PF1 Protein-glutamine gamma-glutamyltransferase Z HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29015.29015.5 8.82 3.19 7.191 4 2 2 0 1138.5868 5511.9676 T542t T550t M553m N554n Hydrogen 515 (R) VPDSTHPRGPIGLVVRFCAQALLHGGGtQKPFWRHtVRmnLDFGK (E) VPDS(0.0)T(0.0)HPRGPIGLVVRFCAQALLHGGGT(0.99)QKPFWRHT(0.99)VRM(1.0)N(1.0)LDFGK C:Carbamidomethylation,K:TMT10-Lys-Only,t:Phosphorylated T,m:Oxidized methionine,n:Deamidated TGM7 80624.4 1 1 6893.1 8.82 HUMAN 1 8.935 1.7926 QKPHLPLSQEKSAIK-p Q8IX21-2;S444-p QKPHLPLSQEKSAIK 0.827721689148675 0.00978031593853579 -0.0336666666666667 -0.458 1.5796588808117 28.288044448643 -0.0336666666666667 -0.458 0.695078910831912 0.00148318578717485 -0.413562318081062 -5.91901656137906 Q8IX21 SLF2 Q8IX21.2.S444.p_SLF2 Q8IX21-2_S444s _1_1_444_444 Q8IX21-2 Q8IX21-2|B1AL16 Isoform 2 of SMC5-SMC6 complex localization factor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15655.15655.4 12.61 12.61 99 1 1 1 0 551.5627 2123.2614 S444s TMT10 436 (K) MQKPHLPLsQEK (S) MQKPHLPLS(1.0)QEK K:TMT10,s:Phosphorylated S SLF2 134456.8 3 7 1220.1 164.91 HUMAN 1 -1.5797 -28.288 QKPITPETAEKLARD-p P60953;T141-p QKPITPETAEKLARD 0.23317345663538 0.245637646869283 0.227333333333333 0.129 12.1466734410512 8.03597398764499 0.227333333333333 0.129 0.0610003962161548 0.157181924269096 2.35837766916455 1.64087801990133 P60953 CDC42 P60953.T141.p_CDC42 P60953_T141t _1_1_141_141 P60953 P60953 Cell division control protein 42 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10218.10218.3 14.73 14.73 3.482 2 1 1 0 670.3849 1929.1624 T141t TMT10 134 (K) QKPITPEtAEK (L) QKPIT(0.0)PET(0.99)AEK K:TMT10,t:Phosphorylated T CDC42 21600.5 1 2 4748.1 27.1 HUMAN 1 12.1467 8.036 QKPPSTGSAPAIESV-p Q9NUQ3;S520-p QKPPSTGSAPAIESV 0.339066061568358 0.450360468103117 0.141666666666667 -0.0833333333333333 8.74018056277417 4.61804369917485 0.141666666666667 -0.0833333333333333 0.133653994725243 0.345299246050249 1.76338782768109 -1.03337771023277 Q9NUQ3 TXLNG Q9NUQ3.S520.p_TXLNG Q9NUQ3_S520s _1_1_520_520 Q9NUQ3 Q9NUQ3|Q9NUQ3-2 Gamma-taxilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15703.15703.3 10.54 10.54 1.805 5 1 1 0 793.7468 2299.2546 S520s TMT10 510 (R) SAVQKPPSTGsAPAIESVD (-) S(0.0)AVQKPPS(0.0)T(0.0)GS(0.99)APAIES(0.0)VD K:TMT10,s:Phosphorylated S TXLNG 61098.1 4 4 3174.1 58.72 HUMAN 1 8.7402 -4.618 QKQASEDSNDLTPTL-p Q9ULH1-2;S1047-p QKQASEDSNDLTPTL 0.169178591243415 0.0173871447527771 1.18733333333333 -0.786666666666667 15.3934299410519 24.2534006980852 1.18733333333333 -0.786666666666667 0.0288839780239569 0.00375543223883279 2.95257015587605 -4.8513169243003 Q9ULH1 ASAP1 Q9ULH1.2.S1047.p_ASAP1 Q9ULH1-2_S1047s _1_1_1047_1047 Q9ULH1-2 Q9ULH1-2|A0A0A0MRE5 Isoform 1 of Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25079.25079.3 14.75 14.75 1.117 5 1 1 0 1157.6003 3390.8157 S1047s TMT10 1037 (R) DAIQKQASEDsNDLTPTLPETPVPLPR (K) DAIQKQAS(0.0)EDS(0.99)NDLT(0.0)PT(0.0)LPET(0.0)PVPLPR K:TMT10,s:Phosphorylated S ASAP1 126865.1 1 11 801.1 222.95 HUMAN 1 15.3934 -24.2534 QKQGPPCSDSEEEVE-p O43159;S104-p QKQGPPCSDSEEEVE 0.421883877305009 0.356570737213553 0.144 -0.0946666666666667 6.90403277267482 5.94098024236827 0.144 -0.0971489975418856 0.203984290717395 0.254625547457129 1.44420398023826 -1.27374233339063 O43159 RRP8 O43159.S104.p_RRP8 O43159_S104sS106s_2_2_104_106 O43159 O43159|E9PPY3 Ribosomal RNA-processing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7372.7576.2 11.9 11.9 99 2 2 2 0 1004.3829 1847.8279 S104s S106s TMT10 99 (K) QGPPCsDsEEEVER (K) QGPPCS(1.0)DS(1.0)EEEVER C:Carbamidomethylation,s:Phosphorylated S RRP8 51455.6 5 8 986.1 191.95 HUMAN 1 6.904 -5.941 QKQKMNDSMDTSNKE-p P06400;S919-p QKQKMNDSMDTSNKE 0.544463415002689 0.00351326223614904 -0.148333333333333 -0.76 4.87557918581853 36.6865806730956 -0.148333333333333 -0.76 0.325418382007056 0.000214457842563182 -1.0812072464515 -8.73633671474284 P06400 RB1 P06400.S919.p_RB1 P06400_S919s _1_1_919_919 P06400 P06400 Retinoblastoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9484.9484.3 9.33 9.33 9.331 3 1 1 0 766.0314 2216.1142 S919s TMT10 916 (K) MNDsMDTSNKEEK (-) MNDS(0.99)MDT(0.0)S(0.0)NKEEK K:TMT10,s:Phosphorylated S RB1 107013.3 1 15 155.1 502.88 HUMAN 1 -4.8756 -36.6866 QKQQLPQTPPSCLKT-p Q8IY81;T573-p QKQQLPQTPPSCLKT 0.404766243702161 0.0138811738705875 -0.129666666666667 -0.398333333333333 7.25182672694265 25.7801334307497 -0.129666666666667 -0.398333333333333 0.188285695670209 0.00264232757435045 -1.50502613447876 -5.2373087922716 Q8IY81 FTSJ3 Q8IY81.T573.p_FTSJ3 Q8IY81_T573t _1_1_573_573 Q8IY81 Q8IY81 pre-rRNA processing protein FTSJ3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16009.16223.2 16.63 16.63 4.141 2 1 1 0 968.0129 1855.0512 T573t TMT10 568 (K) QQLPQtPPSCLK (T) QQLPQT(0.99)PPS(0.0)CLK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T FTSJ3 96956.1 4 3 631.1 257.01 HUMAN 1 -7.2518 -25.7801 QKQRSAGSFKRNSIK-p P21359;S2829-p QKQRSAGSFKRNSIK 0.425266233604415 0.79258422578111 0.114666666666667 -0.066 6.84232595930786 1.40592234150009 0.114666666666667 -0.0659999999999999 0.206903293605202 0.723448742105667 1.43338398954951 -0.372774543440886 P21359 NF1 P21359.S2829.p_NF1 P21359_S2829s _1_1_2829_2829 P21359 P21359|P21359-6|P21359-2 Neurofibromin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6096.6096.2 8.16 8.16 8.158 2 1 1 0 645.8515 1210.7308 S2829s TMT10 2826 (R) SAGsFKR (N) S(0.0)AGS(0.99)FKR K:TMT10,s:Phosphorylated S NF1 322961 4 18 437.1 312.53 HUMAN 1 6.8423 -1.4059 QKREREESEDELEEA-p Q9UKL0;S260-p QKREREESEDELEEA 0.973184341125227 0.180392131530551 -0.00566666666666668 0.135333333333333 0.229708263178159 9.78421093619517 -0.00566666666666669 0.134928321453692 0.94848217534267 0.10509423818287 -0.0676650639316475 1.94347685777086 Q9UKL0 RCOR1 Q9UKL0.S260.p_RCOR1 Q9UKL0_S260s _1_1_260_260 Q9UKL0 Q9UKL0 REST corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16165.16165.5 25.05 25.05 25.051 2 1 1 0 897.651 4404.246 S260s TMT10 256 (R) EREEsEDELEEANGNNPIDIEVDQNKESKK (E) EREES(0.99)EDELEEANGNNPIDIEVDQNKES(0.0)KK K:TMT10,s:Phosphorylated S RCOR1 53440.6 26 5 318.1 366.35 HUMAN 1 -0.2297 9.7842 QKRGFEGSFEELCRN-p P33121;S620-p QKRGFEGSFEELCRN 0.162581364202781 0.225638937715277 0.278333333333333 0.167666666666667 15.798812088259 8.51664903689248 0.278333333333333 0.167666666666667 0.0263098753905049 0.14071328318546 3.02965470541425 1.7241053166914 P33121 ACSL1 P33121.S620.p_ACSL1 P33121_S620s _1_1_620_620 P33121 P33121 Long-chain-fatty-acid--CoA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14888.14888.3 13.9 13.9 99 1 1 1 0 599.2723 1715.8373 S620s TMT10 615 (K) RGFEGsFEELCR (N) RGFEGS(1.0)FEELCR C:Carbamidomethylation,s:Phosphorylated S ACSL1 78968.9 2 1 5150.1 22.4 HUMAN 1 15.7988 8.5166 QKRGKRRSDEGLGSM-p Q96C03-3;S24-p QKRGKRRSDEGLGSM 0.0982861688091806 0.369284668691484 -0.342 -0.164666666666667 21.3305511347267 5.73899756196362 -0.342 -0.164666666666667 0.0073611367619422 0.26674742995872 -4.17049924036666 -1.23764270784743 Q96C03 MIEF2 Q96C03.3.S24.p_MIEF2 Q96C03-3_S24s _1_1_24_24 Q96C03-3 Q96C03-3|Q96C03-2|A8MT25 Isoform 3 of Mitochondrial dynamics protein MID49 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30773.30773.4 22.61 22.61 3.594 2 1 1 0 604.8064 2336.2342 S24s TMT10 22 (K) RRsDEGLGSMVDFLLANAR (L) RRS(0.99)DEGLGS(0.0)MVDFLLANAR s:Phosphorylated S MIEF2 50937.6 1 1 5127.1 22.61 HUMAN 1 -21.3306 -5.739 QKRKGDLSPAELMML-p Q9H9T3;S10-p QKRKGDLSPAELMML 0.0366347254506787 0.0676764124791093 0.938333333333333 0.374 32.8993129557253 15.5602521971506 0.938333333333333 0.374 0.000512942523947059 0.0277955185299567 7.36510153732726 2.9821664869877 Q9H9T3 ELP3 Q9H9T3.S10.p_ELP3 Q9H9T3_S10s _1_1_10_10 Q9H9T3 Q9H9T3|E5RG26 Elongator complex protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36975.36975.4 21.61 21.69 11.435 2 1 1 0 700.3908 2718.5753 S10s TMT10 6 (R) KGDLsPAELMMLTIGDVIK (Q) KGDLS(0.99)PAELMMLT(0.0)IGDVIK K:TMT10,s:Phosphorylated S ELP3 62828.3 1 1 5221.1 21.61 HUMAN 1 32.8993 15.5603 QKRKMEESDEEAVQA-p Q9Y2K7;S692-p QKRKMEESDEEAVQA 0.175496488250389 0.0257521813670265 -0.298 -0.327666666666667 15.0362071812137 21.6157563934515 -0.298 -0.327666666666667 0.0313602330820801 0.00689325525626179 -2.88524462195021 -4.23023840080842 Q9Y2K7 KDM2A Q9Y2K7.S692.p_KDM2A Q9Y2K7_S692s _1_1_692_692 Q9Y2K7 Q9Y2K7|I3VM54|Q9Y2K7-2|Q9Y2K7-3|Q9Y2K7-5|Q9Y2K7-4 Lysine-specific demethylase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10230.10230.2 16.91 16.91 99 1 1 1 0 1131.0695 2181.1676 S692s TMT10 688 (R) KMEEsDEEAVQAK (V) KMEES(1.0)DEEAVQAK K:TMT10,s:Phosphorylated S KDM2A 135243.8 21 8 409.1 323.7 HUMAN 1 -15.0362 -21.6158 QKRKNESSDEISDAE-p Q3L8U1;S612-p QKRKNESSDEISDAE 0.463382860142128 0.27013639882216 0.105666666666667 -0.110166666666667 6.1631956180003 7.4841150117685 0.105666666666667 -0.110166666666667 0.24192482646575 0.178479565013134 1.31358387940883 -1.54505989195224 Q3L8U1 CHD9 Q3L8U1.S612.p_CHD9 Q3L8U1_S612sS616s_2_2_612_616 Q3L8U1 Q3L8U1|Q3L8U1-3|Q3L8U1-2 Chromodomain-helicase-DNA-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14948.14948.4 14.13 14.13 1.292 4 2 2 0 784.3715 2974.5395 S612s S616s TMT10 608 (R) KNESsDEIsDAEQMPQHTLK (D) KNES(0.0)S(0.99)DEIS(0.99)DAEQMPQHT(0.0)LK K:TMT10,s:Phosphorylated S CHD9 328184.1 4 7 1062.1 182 HUMAN 2 6.1632 -7.4841 QKRRRPKSAPSFRPK-p Q8TDM6;S1115-p QKRRRPKSAPSFRPK 0.304289476598221 0.230776669890078 -0.288666666666667 -0.168666666666667 9.68220079464787 8.38793487518194 -0.288666666666667 -0.168666666666667 0.107591985125166 0.144946092657923 -1.92654686480191 -1.70183199826792 Q8TDM6 DLG5 Q8TDM6.S1115.p_DLG5 Q8TDM6_S1115s _1_1_1115_1115 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10256.10256.3 9.43 3.5 9.429 2 1 1 0 476.5984 1347.8149 S1115s TMT10 1115 (K) sAPSFRPK (L) S(0.99)APS(0.0)FRPK K:TMT10,s:Phosphorylated S DLG5 215575.4 3 26 34.1 890.58 HUMAN 1 -9.6822 -8.3879 QKRSAGGSSPEGGED-p Q9H6Z4-3;S32-p QKRSAGGSSPEGGED 0.547515630186733 0.0079657699052288 0.086 0.450666666666667 4.82976605408957 29.9325408679188 0.086 0.449739058813296 0.328869345944802 0.00101565430390117 1.07276749951188 6.40150843658041 Q9H6Z4 RANBP3 Q9H6Z4.3.S32.p_RANBP3 Q9H6Z4-3_S32sS33s_2_2_32_33 Q9H6Z4-3 Q9H6Z4|Q9H6Z4-2|Q9H6Z4-3|B7Z7F3|K7ENB9|K7EID7 Isoform 3 of Ran-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8905.9116.3 9.89 9.89 2.354 5 2 2 0 1114.4774 3181.4857 S32s S33s TMT10 28 (R) SAGGssPEGGEDSDREDGNYCPPVKR (E) S(0.0)AGGS(0.99)S(0.99)PEGGEDS(0.0)DREDGNY(0.0)CPPVKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RANBP3 53752.1 10 15 444.1 311.24 HUMAN 2 4.8298 29.9325 QKRSRSRSPHEAGFC-p Q9NTZ6;S424-p QKRSRSRSPHEAGFC 0.535658500953587 0.0593825375733925 0.0843333333333333 0.220666666666667 5.01821227490884 16.3394909160389 0.0843333333333333 0.220666666666667 0.314904431652475 0.0232300908564605 1.10739456512737 3.13137945066058 Q9NTZ6 RBM12 Q9NTZ6.S424.p_RBM12 Q9NTZ6_S424s _1_1_424_424 Q9NTZ6 Q9NTZ6 RNA-binding protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19716.19716.3 19.87 19.87 19.866 2 1 1 0 649.3259 1865.9984 S424s TMT10 424 (R) sPHEAGFCVYLK (G) S(0.99)PHEAGFCVY(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RBM12 97622 9 2 2839.1 68.44 HUMAN 1 5.0182 16.3395 QKRVPCAYDKTALAL-p P46109;Y251-p QKRVPCAYDKTALAL 0.143598469431802 0.0710915117358706 0.254666666666667 0.377666666666667 17.2271786520288 15.2644949784227 0.254666666666667 0.377666666666667 0.0189357335897711 0.0297543523878501 3.30751436814618 2.92625525510523 P46109 CRKL P46109.Y251.p_CRKL P46109_Y251y _1_1_251_251 P46109 P46109 Crk-like protein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8719.8719.3 9.26 9.26 99 1 1 1 0 516.2671 1466.819 Y251y TMT10 246 (K) RVPCAyDK (T) RVPCAY(1.0)DK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y CRKL 33890.5 2 2 34.1 57.79 HUMAN 1 17.2272 15.2645 QKRVPNAYDKTALAL-p P46108;Y251-p QKRVPNAYDKTALAL 0.128023476673973 0.341223989655982 0.285333333333333 0.155 18.4834262579586 6.18449578878702 0.285333333333333 0.155 0.0141793843315933 0.240741200076485 3.56077075649982 1.31704176339489 P46108 CRK P46108.Y251.p_CRK P46108_Y251y _1_1_251_251 P46108 P46108 Adapter molecule crk GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8121.8163.3 9.55 9.55 99 1 1 1 0 500.9371 1420.8313 Y251y TMT10 246 (K) RVPNAyDK (T) RVPNAY(1.0)DK K:TMT10,y:Phosphorylated Y CRK 33887.1 2 3 38.1 53.65 HUMAN 1 18.4834 6.1845 QKRWKELSKEDLSPA-p P17706;S293-p QKRWKELSKEDLSPA 0.151837827094672 0.422585592359206 -0.386 -0.119333333333333 16.4840490083692 4.98031129364064 -0.386 -0.119333333333333 0.022469587474798 0.317664636680026 -3.16169334606981 -1.10022717030202 P17706 PTPN2 P17706.S293.p_PTPN2 P17706_S293s _1_1_293_293 P17706 P17706|P17706-4|P17706-2|K7EQG9 Tyrosine-protein phosphatase non-receptor type 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16528.16528.5 17.33 13.82 1.552 3 1 1 0 537.0812 2601.4127 S293s TMT10 291 (K) ELsKEDLSPAFDHSPNK (I) ELS(0.99)KEDLS(0.0)PAFDHS(0.0)PNK K:TMT10,s:Phosphorylated S PTPN2 48871.8 5 1 3103.1 60.55 HUMAN 1 -16.484 -4.9803 QKRYRAASAFFTYVS-p O00154;S327-p QKRYRAASAFFTYVS 0.844605466455093 0.976545213982527 0.03 0.00333333333333337 1.41786265715155 0.147036689478362 0.03 0.00333333333333338 0.721462453353069 0.966710266969178 0.37564253788037 0.0436967295350611 O00154 ACOT7 O00154.S327.p_ACOT7 O00154_S327s _1_1_327_327 O00154 O00154|O00154-7|O00154-5|O00154-4|O00154-6 Cytosolic acyl coenzyme A thioester hydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30728.30728.3 19.4 19.4 3.975 5 1 1 0 681.6656 1963.0123 S327s TMT10 325 (R) AAsAFFTYVSLSQEGR (S) AAS(0.99)AFFT(0.0)Y(0.0)VS(0.0)LS(0.0)QEGR s:Phosphorylated S ACOT7 42480 3 1 5430.1 19.4 HUMAN 1 1.4179 0.147 QKSHFQNSREWSGKE-p Q96AQ6;S469-p QKSHFQNSREWSGKE 0.807399255272832 0.739466349441332 -0.04 0.048 1.78604607634211 1.80788134016434 -0.04 0.048 0.662819676405597 0.659495544728714 -0.460881211878044 0.465770516601953 Q96AQ6 PBXIP1 Q96AQ6.S469.p_PBXIP1 Q96AQ6_S469s _1_1_469_469 Q96AQ6 Q96AQ6|Q96AQ6-2|Q96AQ6-3 Pre-B-cell leukemia transcription factor-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7609.7609.4 9.26 9.26 1.349 3 1 1 0 500.9993 1921.0081 S469s TMT10 464 (K) SHFQNsREWSGK (E) S(0.0)HFQNS(0.99)REWS(0.0)GK K:TMT10,s:Phosphorylated S PBXIP1 81098.2 1 3 3062.1 61.72 HUMAN 1 -1.786 1.8079 QKSNEEGSEEKGPEV-p P31947;S74-p QKSNEEGSEEKGPEV 0.848075740909989 0.116542468917028 0.03 0.313333333333333 1.3850309874149 12.3139597093016 0.03 0.313333333333334 0.726937212414308 0.0586953949256433 0.367853409481798 2.38692146772578 P31947 SFN P31947.S74.p_SFN P31947_S74s _1_1_74_74 P31947 P31947|P31947-2 14-3-3 protein sigma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6484.6484.3 13.33 10.49 3.231 2 1 1 0 695.6686 2005.0238 S74s TMT10 69 (K) SNEEGsEEKGPEVR (E) S(0.0)NEEGS(0.99)EEKGPEVR K:TMT10,s:Phosphorylated S SFN 27887.7 1 7 2349.2 87.09 HUMAN 1 1.385 12.314 QKSNLKFSPLQDVLR-p Q8N0Z3;S548-p QKSNLKFSPLQDVLR 0.351928236415973 0.0103260720729397 -0.13 -0.400333333333333 8.42595944280509 27.8839057511519 -0.13 -0.400333333333333 0.143682559496751 0.00162783141255547 -1.7089849023528 -5.80489789754942 Q8N0Z3 SPICE1 Q8N0Z3.S548.p_SPICE1 Q8N0Z3_S548s _1_1_548_548 Q8N0Z3 Q8N0Z3 Spindle and centriole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26100.26100.3 12.23 12.23 3.885 2 1 1 0 685.7197 1975.1741 S548s TMT10 543 (K) SNLKFsPLQDVLR (R) S(0.0)NLKFS(0.99)PLQDVLR K:TMT10,s:Phosphorylated S SPICE1 96605.1 2 7 556.1 273.19 HUMAN 1 -8.426 -27.8839 QKSPVEKSPRPPLKE-p Q7L590;S155-p QKSPVEKSPRPPLKE 0.648139219768035 0.00162286863808758 -0.071 -0.948 3.52823726707456 44.5912065290536 -0.071 -0.948 0.443788734241138 3.47439624587807e-05 -0.825804546361627 -12.4025422942935 Q7L590 MCM10 Q7L590.S155.p_MCM10 Q7L590_S155s _1_1_155_155 Q7L590 Q7L590 Protein MCM10 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11094.11094.4 10.03 10.03 2.264 2 1 1 0 526.3143 2022.2679 S155s TMT10 150 (K) SPVEKsPRPPLK (E) S(0.0)PVEKS(0.99)PRPPLK K:TMT10,s:Phosphorylated S MCM10 99322.4 2 4 1720.1 119.54 HUMAN 1 -3.5282 -44.5912 QKSQGMASLNLPAVS-p P35221;S851-p QKSQGMASLNLPAVS 0.893977543443334 0.0277257937397894 0.0216666666666667 0.284 0.950803894017665 21.1035320121031 0.0216666666666667 0.284 0.803377400502636 0.00775616070243723 0.261492165586232 4.11575971123213 P35221 CTNNA1 P35221.S851.p_CTNNA1 P35221_S851s _1_1_851_851 P35221 P35221-2|P35221-3 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28737.28737.3 9.61 9.61 1.809 3 1 1 0 709.7061 2047.1411 S851s TMT10 846 (K) SQGMAsLNLPAVSWK (M) S(0.0)QGMAS(0.99)LNLPAVS(0.0)WK K:TMT10,s:Phosphorylated S CTNNA1 100754.2 1 23 169.1 491.55 HUMAN 1 0.9508 21.1035 QKSSRGGSPDLWKSS-p Q96JM3;S476-p QKSSRGGSPDLWKSS 0.622841097517516 0.0218539987627528 0.103666666666667 0.384333333333333 3.82083541029555 22.6947035787551 0.103666666666667 0.384333333333333 0.41487422961475 0.00537687130905966 0.882723402444768 4.47769516773029 Q96JM3 CHAMP1 Q96JM3.S476.p_CHAMP1 Q96JM3_S476s _1_1_476_476 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17597.17597.2 12.24 1.04 99 1 1 1 0 699.3648 1317.7567 S476s TMT10 474 (R) GGsPDLWK (S) GGS(1.0)PDLWK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 8 29 25.1 950.05 HUMAN 1 3.8208 22.6947 QKSTPSESPRTKKFP-p A8K855;S21-p QKSTPSESPRTKKFP 0.335167066678141 0.00358460126670815 -0.199 -0.689333333333333 8.8542306054926 36.4274030987368 -0.199 -0.689333333333333 0.130189793891029 0.000227645825169447 -1.78312979575721 -8.63483956229663 A8K855 EFCAB7 A8K855.S21.p_EFCAB7 A8K855_S21s _1_1_21_21 A8K855 A8K855|A8K855-2 EF-hand calcium-binding domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4080.4080.3 11.9 7.83 2.438 5 1 1 0 543.2873 1547.8793 S21s TMT10 16 (K) STPSEsPRTK (K) S(0.0)T(0.0)PS(0.0)ES(0.99)PRT(0.0)K K:TMT10,s:Phosphorylated S EFCAB7 73064 3 1 3826.1 42.29 HUMAN 1 -8.8542 -36.4274 QKSVEERSLRHPLRR-p Q99959;S140-p QKSVEERSLRHPLRR 0.158734869392744 0.205961721624898 0.308666666666667 0.126333333333333 16.0114085869039 9.03072528350085 0.308666666666667 0.127221746488675 0.0250529655556252 0.125005025102065 3.0703811581104 1.81302717893522 Q99959 PKP2 Q99959.S140.p_PKP2 Q99959_S140s _1_1_140_140 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5520.5520.4 12.37 12.37 3.875 2 1 1 0 447.7432 1707.9816 S140s TMT10 135 (K) SVEERsLRHPLR (R) S(0.0)VEERS(0.99)LRHPLR s:Phosphorylated S PKP2 97926.6 1 6 257.1 399.17 HUMAN 1 16.0114 9.0307 QKTDAEATDTEATET-p Q9Y3D3;T130-p QKTDAEATDTEATET 0.0778192953261892 0.467454692586924 0.385333333333333 0.0776666666666667 23.6945782594084 4.40294051484105 0.385333333333333 0.0776666666666667 0.0042711239403813 0.362832305607338 4.72057151071092 0.993229186937634 Q9Y3D3 MRPS16 Q9Y3D3.T130.p_MRPS16 Q9Y3D3_T130t _1_1_130_130 Q9Y3D3 Q9Y3D3 28S ribosomal protein S16, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6216.6216.2 8.99 8.99 1.105 5 1 1 0 832.341 1583.7122 T130t TMT10 125 (K) TDAEAtDTEATET (-) T(0.0)DAEAT(0.99)DT(0.0)EAT(0.0)ET(0.0) t:Phosphorylated T MRPS16 15572.8 6 1 4609.1 28.83 HUMAN 1 23.6946 4.4029 QKTENGASA______-p P20962;S101-p QKTENGASA______ 0.0832139716415161 0.0369181497054097 0.645666666666667 0.311666666666667 23.0618817602659 19.2641579546959 0.645666666666667 0.311666666666667 0.00494096552854486 0.0118463403116922 4.56907144563064 3.71946185347743 P20962 PTMS P20962.S101.p_PTMS P20962_S101s_1_1_101_101 P20962 P20962 Parathymosin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4598.4598.2 11.38 11.38 10.128 2 1 1 0 722.8585 1363.7582 N98n S101s TMT10 94 (R) QKTEnGAsA (-) QKT(0.0)EN(1.0)GAS(0.99)A K:TMT10,n:Deamidated,s:Phosphorylated S PTMS 11529.7 1 3 3501.1 49.63 HUMAN 1 23.0619 19.2642 QKTPLSQSMSVLPTS-p Q6WKZ4;S234-p QKTPLSQSMSVLPTS 0.336172963233061 0.831870513320841 0.174666666666667 0.0356666666666667 8.82803179958542 1.11894734807994 0.174666666666667 0.0356666666666667 0.13097753720254 0.772867891708091 1.77859484104119 0.303424240137808 Q6WKZ4 RAB11FIP1 Q6WKZ4.S234.p_RAB11FIP1 Q6WKZ4_S234s _1_1_234_234 Q6WKZ4 Q6WKZ4|Q6WKZ4-3|E7EX40|Q6WKZ4-2 Rab11 family-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20356.20356.3 16.79 13.78 1.104 6 1 1 0 866.4793 2517.4565 S234s TMT10 229 (K) TPLSQsMSVLPTSKPEK (V) T(0.0)PLS(0.0)QS(0.99)MS(0.0)VLPT(0.0)S(0.0)KPEK K:TMT10,s:Phosphorylated S RAB11FIP1 137564.1 12 3 56.1 721.17 HUMAN 1 8.828 1.1189 QKVERIASHDFDPTD-p Q9NZN5;S41-p QKVERIASHDFDPTD 0.720561004624471 0.0865782151842836 -0.0486666666666667 -0.226 2.68788647218197 14.0665825855606 -0.0486666666666667 -0.226 0.53853179943659 0.0392050255699442 -0.656272858284931 -2.70352022889561 Q9NZN5 ARHGEF12 Q9NZN5.S41.p_ARHGEF12 Q9NZN5_S41s _1_1_41_41 Q9NZN5 Q9NZN5 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12531.12531.4 17.42 17.42 7.526 5 1 1 0 601.3116 2322.2545 S41s TMT10 39 (R) IAsHDFDPTDSSSKK (T) IAS(0.99)HDFDPT(0.0)DS(0.0)S(0.0)S(0.0)KK K:TMT10,s:Phosphorylated S ARHGEF12 174199.1 2 2 251.1 406.16 HUMAN 1 -2.6879 -14.0666 QKVERIASHDFDPTG-p Q9NZN5-2;S41-p QKVERIASHDFDPTG 0.640733043867829 0.853232487104188 0.092 0.0193333333333334 3.61046831265241 0.970613602834519 0.092 0.0193333333333334 0.435464913677316 0.799721256588311 0.841897256832609 0.266464685936086 Q9NZN5 ARHGEF12 Q9NZN5.2.S41.p_ARHGEF12 Q9NZN5-2_S41s _1_1_41_41 Q9NZN5-2 Q9NZN5-2 Isoform 2 of Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19202.19202.3 13.75 13.75 6.057 2 1 1 0 622.3103 1784.9493 S41s TMT10 39 (R) IAsHDFDPTGLVQR (C) IAS(0.99)HDFDPT(0.0)GLVQR s:Phosphorylated S ARHGEF12 172082 1 21 251.2 406.16 HUMAN 1 3.6105 0.9706 QKVHNQDSEDEL___-p Q8TAM1;S719-p QKVHNQDSEDEL___ 0.688052891491185 0.466050592228306 0.0726666666666667 0.153666666666667 3.04973910738863 4.4208977833384 0.0726666666666667 0.153666666666667 0.495479954751151 0.361335158900218 0.730496890566774 0.996594894054122 Q8TAM1 BBS10 Q8TAM1.S719.p_BBS10 Q8TAM1_S719s _1_1_719_719 Q8TAM1 Q8TAM1 Bardet-Biedl syndrome 10 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8855.8855.2 11.84 11.84 99 1 1 1 0 747.8203 1414.6648 S719s TMT10 714 (K) VHNQDsEDEL (-) VHNQDS(1.0)EDEL s:Phosphorylated S BBS10 82091.3 1 1 6412.1 11.84 HUMAN 1 3.0497 4.4209 QKVQGGHSPDDHRVR-p A2AJT9;S139-p QKVQGGHSPDDHRVR 0.530634797393029 0.0345225029418539 0.0883333333333333 0.330666666666667 5.09432075894017 19.6954543653109 0.0883333333333333 0.330666666666667 0.309433923546351 0.0107264142063291 1.12131512004846 3.81039784367512 A2AJT9 CXorf23 A2AJT9.S139.p_CXorf23 A2AJT9_S139s _1_1_139_139 A2AJT9 A2AJT9|A2AJT9-2|A2AJT9-3 BCLAF1 and THRAP3 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3390.3390.3 15.14 11.5 99 1 1 1 0 505.2298 1433.7083 S139s TMT10 134 (K) VQGGHsPDDHR (V) VQGGHS(1.0)PDDHR s:Phosphorylated S BCLAF3 84269.3 4 4 1202.1 166.95 HUMAN 1 5.0943 19.6955 QKVSVDKSFSRGWSR-p Q6GYQ0-2;S715-p QKVSVDKSFSRGWSR 0.746920700156285 0.00228635428030843 0.165 -1.16966666666667 2.40555897819204 40.7415844848005 0.165 -1.16966666666667 0.574703844249054 8.43027130697603e-05 0.596853997631858 -10.4700006235089 Q6GYQ0 RALGAPA1 Q6GYQ0.2.S715.p_RALGAPA1 Q6GYQ0-2_S715s _1_1_715_715 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12575.12575.3 9.86 9.86 1.171 3 1 1 0 521.6165 1482.868 S715s TMT10 710 (K) VSVDKsFSR (G) VS(0.0)VDKS(0.99)FS(0.0)R K:TMT10,s:Phosphorylated S RALGAPA1 236609.9 1 7 317.1 366.49 HUMAN 1 2.4056 -40.7416 QKVTAMATRITARVE-p Q9UK96;T935-p QKVTAMATRITARVE 0.626039464597712 0.8033181617083 -0.0743333333333333 -0.03 3.77773763221673 1.3314914951457 -0.0743333333333334 -0.03 0.419011783845793 0.735954305707541 -0.874398175081604 -0.355043487996093 Q9UK96 FBXO10 Q9UK96.T935.p_FBXO10 Q9UK96_S922sT935t_2_2_922_935 Q9UK96 Q9UK96 F-box only protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3594.3594.3 8 8 1.134 3 2 2 0 677.3063 1868.9962 S922s N926n T935t Hydrogen 921 (R) PsAAHnGQKVTAMAtR (I) PS(0.99)AAHN(1.0)GQKVT(0.0)AMAT(0.99)R K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T FBXO10 106734.1 1 2 5240.1 21.42 HUMAN 1 -3.7777 -1.3315 QKVVKPKSPEPEATL-p Q9UPQ0-4;S706-p QKVVKPKSPEPEATL 0.0977397848374227 0.258811341529705 -0.515333333333333 0.127666666666667 21.3866163734907 7.73404586238462 -0.515333333333334 0.127666666666667 0.00726671893407677 0.168498257392763 -4.18305582718916 1.58850198809868 Q9UPQ0 LIMCH1 Q9UPQ0.4.S706.p_LIMCH1 Q9UPQ0-4_S706s _1_1_706_706 Q9UPQ0-4 Q9UPQ0-3|G5EA03|Q9UPQ0-4|Q9UPQ0-2|Q9UPQ0-10|E9PDJ9|Q9UPQ0-5|Q9UPQ0-6|Q9UPQ0-8|E7EPK0|Q9UPQ0-9 Isoform 4 of LIM and calponin homology domains-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28123.28123.5 18.24 18.24 4.83 3 1 1 0 648.7758 3159.8839 S706s TMT10 701 (K) VVKPKsPEPEATLTFPFLDK (M) VVKPKS(0.99)PEPEAT(0.0)LT(0.0)FPFLDK K:TMT10,s:Phosphorylated S LIMCH1 121463.5 8 15 679.1 246.52 HUMAN 1 -21.3866 7.734 QKVVVDLSEQEEEKV-p Q9NXH9;S120-p QKVVVDLSEQEEEKV 0.74843463214063 0.762471227820131 -0.0576666666666667 0.035 2.3925778674374 1.62773590371765 -0.0576666666666667 0.035 0.576424210298622 0.687426721024401 -0.594087072351008 0.424640641080958 Q9NXH9 TRMT1 Q9NXH9.S120.p_TRMT1 Q9NXH9_S120s _1_1_120_120 Q9NXH9 Q9NXH9|Q9NXH9-2 tRNA (guanine(26)-N(2))-dimethyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22725.22725.4 10.1 10.1 4.695 3 1 1 0 981.7579 3844.0431 S120s TMT10 115 (K) VVVDLsEQEEEKVELKESENLASGDQPR (T) VVVDLS(0.99)EQEEEKVELKES(0.0)ENLAS(0.0)GDQPR K:TMT10,s:Phosphorylated S TRMT1 73430.9 2 1 2689.1 73.91 HUMAN 1 -2.3926 1.6277 QKYMMVDSAEDQKIH-p Q9H467;S225-p QKYMMVDSAEDQKIH 0.860894111325596 0.422537388415216 0.027 0.0763333333333334 1.27117593339746 4.98104715740998 0.027 0.0763333333333334 0.746246670832409 0.317610816494886 0.340581897173643 1.10036205743467 Q9H467 CUEDC2 Q9H467.S225.p_CUEDC2 Q9H467_S225s _1_1_225_225 Q9H467 Q9H467 CUE domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16620.16620.3 11.3 11.3 11.3 2 1 1 0 618.9523 1774.8756 S225s TMT10 220 (K) YMMVDsAEDQK (I) Y(0.0)MMVDS(0.99)AEDQK K:TMT10,s:Phosphorylated S CUEDC2 32065.8 1 2 3507.1 49.53 HUMAN 1 1.2712 4.981 QKYWGPASPTHKLPP-p Q9H6S3;S570-p QKYWGPASPTHKLPP 0.202050344662992 0.00346842376580928 -0.286 -0.623666666666667 13.4852163718843 36.7714399227713 -0.286 -0.623666666666667 0.044820671912384 0.000210308103823885 -2.59887897722173 -8.76979739214711 Q9H6S3 EPS8L2 Q9H6S3.S570.p_EPS8L2 Q9H6S3_S570s _1_1_570_570 Q9H6S3 Q9H6S3-3|Q9H6S3-2 Epidermal growth factor receptor kinase substrate 8-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13189.13189.3 12.79 12.79 3.473 3 1 1 0 561.2882 1601.884 S570s TMT10 565 (K) YWGPAsPTHK (L) Y(0.0)WGPAS(0.99)PT(0.0)HK K:TMT10,s:Phosphorylated S EPS8L2 81246.7 4 10 559.1 272.21 HUMAN 1 -13.4852 -36.7714 QLAANRHSLVEKLGE-p Q765P7;S673-p QLAANRHSLVEKLGE 0.0870441623178627 0.0267659225048899 -0.467666666666667 -0.448333333333333 22.5946223068163 21.3453175482123 -0.467666666666667 -0.448333333333333 0.00550221769604893 0.00733615071859858 -4.45924502751809 -4.16956321408016 Q765P7 MTSS1L Q765P7.S673.p_MTSS1L Q765P7_S673s _1_1_673_673 Q765P7 Q765P7|A0A087WXN9 MTSS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20356.20356.5 21.39 16.59 5.625 6 1 1 0 969.0866 4761.4385 S673s TMT10 637 (K) RLSLPNTAWGSPSPEAAGYPGAGAEDEQQQLAANRHsLVEK (L) RLS(0.0)LPNT(0.0)AWGS(0.0)PS(0.0)PEAAGY(0.0)PGAGAEDEQQQLAANRHS(0.99)LVEK K:TMT10,s:Phosphorylated S MTSS1L 80498.5 3 12 425.1 319.48 HUMAN 1 -22.5946 -21.3453 QLADLYKSFIKDYPV-p P06733;S282-p QLADLYKSFIKDYPV 0.133015503975615 0.132980033847343 0.396 -0.218666666666667 18.0617632335186 11.5482440252502 0.396 -0.218666666666667 0.0156251313425972 0.0700125019019826 3.47477575912098 -2.25137831268757 P06733 ENO1 P06733.S282.p_ENO1 P06733_S282s _1_1_282_282 P06733 P06733 Alpha-enolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.36060.36060.4 16.53 16.53 2.222 3 1 1 0 938.9673 3672.8829 S282s TMT10 282 (K) sFIKDYPVVSIEDPFDQDDWGAWQK (F) S(0.99)FIKDY(0.0)PVVS(0.0)IEDPFDQDDWGAWQK K:TMT10,s:Phosphorylated S ENO1 47510.4 1 11 623.1 259.34 HUMAN 1 18.0618 -11.5482 QLADRKLSDASDERG-p Q658Y4;S671-p QLADRKLSDASDERG 0.771638354290043 0.338172352645242 -0.0533333333333333 0.155 2.15892476950912 6.23813697689424 -0.0533333333333334 0.155 0.608285582571977 0.237786011498356 -0.543716348702334 1.3265495123251 Q658Y4 FAM91A1 Q658Y4.S671.p_FAM91A1 Q658Y4_S671s _1_1_671_671 Q658Y4 Q658Y4|E7ER68 Protein FAM91A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31112.31112.5 28.38 28.38 1.162 10 1 1 0 1011.8862 4975.4457 S671s TMT10 669 (R) KLsDASDERGEPDLASGSDVNGSTESFEMVIEEATIDSATK (Q) KLS(0.99)DAS(0.0)DERGEPDLAS(0.0)GS(0.0)DVNGS(0.0)T(0.0)ES(0.0)FEMVIEEAT(0.0)IDS(0.0)AT(0.0)K K:TMT10,s:Phosphorylated S FAM91A1 94706.1 9 3 1143.1 172.97 HUMAN 1 -2.1589 6.2381 QLAELNGSIGNYCQD-p Q14789-2;S1941-p QLAELNGSIGNYCQD 0.88678654508837 0.00140014198002876 0.0356666666666667 -0.929666666666667 1.01806812283228 46.1861356864064 0.0356666666666667 -0.929666666666667 0.791030424727838 2.40650313268083e-05 0.278404505267083 -13.29721396818 Q14789 GOLGB1 Q14789.2.S1941.p_GOLGB1 Q14789-2_S1941s _1_1_1941_1941 Q14789-2 Q14789-2 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34364.34364.4 26.14 26.14 5.102 4 1 1 0 1159.8337 4556.329 S1941s TMT10 1931 (R) LMNQLAELNGsIGNYCQDVTDAQIKNELLESEMK (N) LMNQLAELNGS(0.99)IGNY(0.0)CQDVT(0.0)DAQIKNELLES(0.0)EMK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GOLGB1 378557.2 1 20 93.1 610.98 HUMAN 1 1.0181 -46.1861 QLAKGNKSILDADPE-p Q6P9B6;S425-p QLAKGNKSILDADPE 0.878443024385905 0.153313238244886 0.029 -0.231666666666667 1.10556124716754 10.7102374585113 0.029 -0.231666666666667 0.775253749342571 0.0849134045798258 0.300151705214773 -2.10449929503627 Q6P9B6 TLDC1 Q6P9B6.S425.p_TLDC1 Q6P9B6_S425s _1_1_425_425 Q6P9B6 Q6P9B6 TLD domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24414.24414.4 23.09 19.85 16.165 3 1 1 0 740.64 2879.5627 S425s TMT10 422 (K) GNKsILDADPEAQALLEISGHSR (H) GNKS(0.99)ILDADPEAQALLEIS(0.0)GHS(0.0)R K:TMT10,s:Phosphorylated S TLDC1 51620.3 1 1 2898.1 66.6 HUMAN 1 1.1056 -10.7102 QLANISMSGNNLAEI-p Q8WXH0;S5417-p QLANISMSGNNLAEI 0.387041482456231 0.118900433178767 0.128333333333333 0.186 7.62899586246197 12.195841835238 0.128333333333333 0.186 0.172623697119604 0.060313678472512 1.57072699862428 2.36591714497402 Q8WXH0 SYNE2 Q8WXH0.S5417.p_SYNE2 Q8WXH0_S5417s _1_1_5417_5417 Q8WXH0 Q8WXH0-2|A0A0A0MRE3|G3V5X4|A0A0C4DGK3|Q8WXH0-7 Nesprin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36846.36846.3 17.91 17.91 1.232 2 1 1 0 1121.9318 3283.8125 S5417s TMT10 5408 (K) FQQLANISMsGNNLAEILPPALQDIK (E) FQQLANIS(0.0)MS(0.99)GNNLAEILPPALQDIK K:TMT10,s:Phosphorylated S SYNE2 802304.8 4 13 188.1 472.65 HUMAN 1 7.629 12.1958 QLARGLLSGMFLFAT-p Q8TF72-2;S19-p QLARGLLSGMFLFAT 0.963571330821754 0.56147725709036 -0.00733333333333335 0.0733333333333333 0.310064246637034 3.37820014275251 -0.00733333333333335 0.0733333333333333 0.93109410137911 0.45938835883293 -0.0905677615233322 0.796115647012424 Q8TF72 SHROOM3 Q8TF72.2.S19.p_SHROOM3 Q8TF72-2_S19s_1_1_19_19 Q8TF72-2 Q8TF72-2 Isoform 2 of Protein Shroom3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18698.18698.2 7.09 3.57 1.148 2 1 1 0 819.42 1541.8711 S19s M21m TMT10 16 (R) GLLsGmFLFATR (R) GLLS(0.99)GM(1.0)FLFAT(0.0)R s:Phosphorylated S,m:Oxidized methionine SHROOM3 20570.4 3 1 7170.1 7.41 HUMAN 1 -0.3101 3.3782 QLASVQYTLPKTAGG-p G3V1L9;T589-p QLASVQYTLPKTAGG 0.342075757494071 0.0907173209885498 0.145333333333333 0.310333333333333 8.65688518000958 13.789370935648 0.145333333333333 0.310333333333333 0.136242147963501 0.0417890892680618 1.74896872136682 2.65276507286181 G3V1L9 TJP1 G3V1L9.T589.p_TJP1 G3V1L9_T589t _1_1_589_589 G3V1L9 G3V1L9|Q07157|G5E9E7|A0A087X0K9|Q07157-2 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21433.21433.3 14.78 14.78 1.752 3 1 1 0 662.6957 1906.105 T589t TMT10 580 (R) AEQLASVQYtLPK (T) AEQLAS(0.0)VQY(0.0)T(0.99)LPK K:TMT10,t:Phosphorylated T TJP1 197797.8 3 48 41.2 827.72 HUMAN 1 8.6569 13.7894 QLDDHPESDDEENFI-p Q03701;S629-p QLDDHPESDDEENFI 0.2040437776167 0.0222476374419123 -0.454333333333333 0.45 13.3678421396429 22.5747746784212 -0.454333333333333 0.45 0.0460485316112615 0.0055274208468191 -2.57756621241553 4.44975308915269 Q03701 CEBPZ Q03701.S629.p_CEBPZ Q03701_S629s _1_1_629_629 Q03701 Q03701 CCAAT/enhancer-binding protein zeta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23750.23750.5 26.66 26.66 7.321 4 1 1 0 1085.9006 5345.5097 S629s TMT10 621 (R) SQLDDHPEsDDEENFIDANDDEDMEKFTDADKETEIVK (K) S(0.0)QLDDHPES(0.99)DDEENFIDANDDEDMEKFT(0.0)DADKET(0.0)EIVK K:TMT10,s:Phosphorylated S CEBPZ 121599.4 16 3 1132.1 173.97 HUMAN 1 -13.3678 22.5748 QLDDILKYHTEIVFA-p P05023-4;Y684-p QLDDILKYHTEIVFA 0.897527187617422 0.0955923433701338 0.0243333333333333 0.261333333333333 0.920838500703356 13.4842298380916 0.0243333333333333 0.261333333333333 0.808939700557314 0.0448308544341081 0.253902000076537 2.59721072768167 P05023 ATP1A1 P05023.4.Y684.p_ATP1A1 P05023-4_Y684y _1_1_684_684 P05023-4 P05023|P05023-4|P05023-3 Isoform 4 of Sodium/potassium-transporting ATPase subunit alpha-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.14026.14026.2 18.06 18.06 3.011 2 1 1 0 722.864 1364.7524 Y684y TMT10 684 (K) yHTEIVFAR (T) Y(0.99)HT(0.0)EIVFAR y:Phosphorylated Y ATP1A1 114310.4 3 5 14.1 89.11 HUMAN 1 0.9208 13.4842 QLDHRKPSPAQAAET-p A0A0X1KG71;S605-p QLDHRKPSPAQAAET 0.683493677980925 0.0635533432961536 0.0556666666666667 0.218666666666667 3.09870970556465 15.9383573508169 0.0556666666666667 0.218666666666667 0.489924354897612 0.0254779373245598 0.740391022393221 3.05421537702504 A0A0X1KG71 NotFound A0A0X1KG71.S605.p_NotFound A0A0X1KG71_S605s _1_1_605_605 A0A0X1KG71 A0A0X1KG71|Q8WX92 Negative elongation factor B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36136.36136.4 24.94 24.94 5.288 3 1 1 0 718.6415 2791.5807 S605s Hydrogen 603 (R) KPsPAQAAETPALELPLPSVPAPAPL (-) KPS(0.99)PAQAAET(0.0)PALELPLPS(0.0)VPAPAPL K:TMT10-Lys-Only,s:Phosphorylated S NELFB 70665.3 25 1 2886.1 66.91 HUMAN 1 3.0987 15.9384 QLDLSIDSLDLSCEE-p Q14980;S1724-p QLDLSIDSLDLSCEE 0.600598442473182 0.740110122995943 0.075 -0.0376666666666666 4.09033301016961 1.8019974802016 0.075 -0.0376666666666666 0.38991208768539 0.660389640639821 0.934357918045481 -0.464440321668531 Q14980 NUMA1 Q14980.S1724.p_NUMA1 Q14980_S1724s _1_1_1724_1724 Q14980 Q14980|Q14980-2|A0A087WY61 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26885.26885.5 11.81 11.81 1.243 8 1 1 0 857.2501 4202.2469 S1724s TMT10 1709 (K) SREPQAKPQLDLSIDsLDLSCEEGTPLSITSK (L) S(0.0)REPQAKPQLDLS(0.0)IDS(0.99)LDLS(0.0)CEEGT(0.0)PLS(0.0)IT(0.0)S(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NUMA1 239339.3 1 16 31.1 900.97 HUMAN 1 4.0903 -1.802 QLDPLRKSPTMEQAV-p Q8ND56-2;S192-p QLDPLRKSPTMEQAV 0.662891847562873 0.695738250898345 0.067 0.0393333333333333 3.34136924099221 2.16525735309105 0.067 0.0393333333333334 0.463300827505402 0.607399268689729 0.788934916704227 0.545030969211212 Q8ND56 LSM14A Q8ND56.2.S192.p_LSM14A Q8ND56-2_S192s _1_1_192_192 Q8ND56-2 Q8ND56|Q8ND56-2|Q8ND56-3 Isoform 2 of Protein LSM14 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20451.20451.4 26.75 26.75 1.296 4 1 1 0 689.6052 2675.4249 S192s TMT10 192 (K) sPTMEQAVQTASAHLPAPAAVGRR (S) S(0.99)PT(0.0)MEQAVQT(0.0)AS(0.0)AHLPAPAAVGRR s:Phosphorylated S LSM14A 50781.2 13 3 646.1 254.77 HUMAN 1 3.3414 2.1653 QLDPRALSDVTDEEE-p Q16659;S386-p QLDPRALSDVTDEEE 0.486350322519858 0.0240488908252975 -0.118 -0.386333333333333 5.76547103833475 22.0668879946744 -0.118 -0.386333333333333 0.265126351982254 0.00621314087124434 -1.24266925989374 -4.33264205846254 Q16659 MAPK6 Q16659.S386.p_MAPK6 Q16659_S386s _1_1_386_386 Q16659 Q16659 Mitogen-activated protein kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19261.19261.3 15.57 12.24 3.579 2 1 1 0 704.3317 2031.008 S386s TMT10 384 (R) ALsDVTDEEEVQVDPR (K) ALS(0.99)DVT(0.0)DEEEVQVDPR s:Phosphorylated S MAPK6 83306.9 1 3 2324.1 87.84 HUMAN 1 -5.7655 -22.0669 QLDRHLPSPPTLDSI-p Q9Y4B6;S1000-p QLDRHLPSPPTLDSI 0.456411337786712 0.115421907134631 0.099 0.196666666666667 6.28023084834669 12.3717217193725 0.099 0.196666666666667 0.235492410505828 0.0579199032930783 1.33433470325388 2.39720659386512 Q9Y4B6 VPRBP Q9Y4B6.S1000.p_VPRBP Q9Y4B6_S1000s _1_1_1000_1000 Q9Y4B6 Q9Y4B6|Q9Y4B6-2|Q9Y4B6-3 DDB1- and CUL4-associated factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.35990.36187.3 17.85 17.85 3.968 5 1 1 0 754.3965 2181.2117 S1000s TMT10 997 (R) HLPsPPTLDSIITEYLR (E) HLPS(0.99)PPT(0.0)LDS(0.0)IIT(0.0)EY(0.0)LR s:Phosphorylated S DCAF1 170772.9 5 8 1102.1 177.43 HUMAN 1 6.2802 12.3717 QLDSMLGSLQSDLNK-p A0A1B0GTU4;S830-p QLDSMLGSLQSDLNK 0.319991630816832 0.135166162279638 0.163333333333333 0.169666666666667 9.26382815726705 11.4561966721114 0.163333333333333 0.169666666666667 0.118472399411105 0.071512231930627 1.8540428794711 2.23517700805824 A0A1B0GTU4 NotFound A0A1B0GTU4.S830.p_NotFound A0A1B0GTU4_S830s _1_1_830_830 A0A1B0GTU4 P49023|F5GZ78|P49023-2|P49023-4|A0A1B0GTU4|P49023-3 Paxillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28422.28422.4 17.55 17.55 2.888 8 1 1 0 927.4738 3626.9303 S830s TMT10 808 (K) TGSSSPPGGPPKPGSQLDSMLGsLQSDLNK (L) T(0.0)GS(0.0)S(0.0)S(0.0)PPGGPPKPGS(0.0)QLDS(0.0)MLGS(0.99)LQS(0.0)DLNK K:TMT10,s:Phosphorylated S PXN 117843.4 2 19 288.1 382.57 HUMAN 1 9.2638 11.4562 QLDWDVRSIQRWFRQ-p Q6ZMG9-2;S112-p QLDWDVRSIQRWFRQ 0.848075740909989 0.787619288180608 0.0273333333333333 0.0283333333333334 1.38429483063054 1.43955409101415 0.0273333333333333 0.0283333333333334 0.727060443341796 0.717867994108931 0.367678383061672 0.380730745151156 Q6ZMG9 CERS6 Q6ZMG9.2.S112.p_CERS6 Q6ZMG9-2_S112s _1_1_112_112 Q6ZMG9-2 Q6ZMG9-2 Isoform 2 of Ceramide synthase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16918.16918.3 13.76 8.53 99 1 1 1 0 575.628 1644.9019 S112s TMT10 105 (K) QLDWDVRsIQR (W) QLDWDVRS(1.0)IQR s:Phosphorylated S CERS6 46306.6 2 1 6130.1 13.76 HUMAN 1 1.3843 1.4396 QLEEGEETEPDCKYS-p P38432;T122-p QLEEGEETEPDCKYS 0.154045884939488 0.0221883048969723 1.10466666666667 -0.545 16.3185372544993 22.5900112437475 1.10466666666667 -0.545 0.0233424412572345 0.00550806270383452 3.12959417334675 -4.4532968647727 P38432 COIL P38432.T122.p_COIL P38432_T122t _1_1_122_122 P38432 P38432 Coilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16270.16270.4 21.44 19.36 9.067 3 1 1 0 821.9199 3204.6904 T122t TMT10 113 (R) AFQLEEGEEtEPDCKYSKK (H) AFQLEEGEET(0.99)EPDCKY(0.0)S(0.0)KK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T COIL 63291.8 21 3 395.1 330.42 HUMAN 1 16.3185 -22.59 QLEETMPSPYGRRII-p Q02880;S1236-p QLEETMPSPYGRRII 0.376518154999368 0.0244383221956364 0.182 -0.301666666666667 7.84444512670857 21.9511979679397 0.182 -0.301666666666667 0.164268952333984 0.00638087450395035 1.6081639228234 -4.3062377515561 Q02880 TOP2B Q02880.S1236.p_TOP2B Q02880_S1236s _1_1_1236_1236 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18768.18768.3 13.52 13.52 2.424 3 1 1 0 729.7163 2107.1622 S1236s TMT10 1227 (K) KLQLEETMPsPYGR (R) KLQLEET(0.0)MPS(0.99)PY(0.0)GR K:TMT10,s:Phosphorylated S TOP2B 184233.7 5 28 71.1 658.36 HUMAN 1 7.8444 -21.9512 QLEINFNTLQTKLRL-p O43707;T359-p QLEINFNTLQTKLRL 0.274481083437932 0.32426936068927 -0.237666666666667 0.279666666666667 10.6236461377348 6.4690531548977 -0.237666666666667 0.279666666666667 0.0866234319694047 0.225473073302939 -2.090298665661 1.36736520094587 O43707 ACTN4 O43707.T359.p_ACTN4 O43707_T359t _1_1_359_359 O43707 P35609-2|P12814|P12814-2|H9KV75|O43707-2|F6THM6|A0A087WSZ2|P12814-4|P12814-3|Q08043 Alpha-actinin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24150.24150.3 17.8 17.8 3.686 2 1 1 0 716.3726 2067.1309 T359t TMT10 351 (K) CQLEINFNtLQTK (L) CQLEINFNT(0.99)LQT(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ACTN4 105308.6 1 3 1097.1 178.17 HUMAN 1 -10.6236 6.4691 QLELKRKSLDTESLQ-p Q6UWE0;S494-p QLELKRKSLDTESLQ 0.0732937591551094 0.654976908619292 -0.447666666666667 0.0593333333333333 24.3835303001447 2.5124690975585 -0.447666666666667 0.0593333333333333 0.0036445756561365 0.560729093676741 -4.88931934432516 0.619442977387467 Q6UWE0 LRSAM1 Q6UWE0.S494.p_LRSAM1 Q6UWE0_S494s _1_1_494_494 Q6UWE0 Q6UWE0|Q6UWE0-3 E3 ubiquitin-protein ligase LRSAM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18875.18875.4 13.76 13.76 2.353 4 1 1 0 647.8342 2508.3492 S494s TMT10 492 (K) RKsLDTESLQEMISEQR (W) RKS(0.99)LDT(0.0)ES(0.0)LQEMIS(0.0)EQR K:TMT10,s:Phosphorylated S LRSAM1 84619.4 2 3 2054.1 100.32 HUMAN 1 -24.3835 2.5125 QLERVRVSPQDANPL-p O60716-3;S47-p QLERVRVSPQDANPL 0.761479033330472 0.0316592078581077 -0.048 -0.281333333333333 2.26594188036772 20.2520133651658 -0.048 -0.281333333333333 0.593479622764637 0.00943623316325137 -0.566923277647852 -3.92950880824563 O60716 CTNND1 O60716.3.S47.p_CTNND1 O60716-3_S47s _1_1_47_47 O60716-3 O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-8 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19114.19114.4 16.62 14.15 15.212 3 1 1 0 588.0548 2269.2284 S47s TMT10 44 (R) VRVsPQDANPLMANGTLTR (R) VRVS(0.99)PQDANPLMANGT(0.0)LT(0.0)R s:Phosphorylated S CTNND1 105545.3 8 8 21.1 1014.17 HUMAN 1 -2.2659 -20.252 QLESLSDSWARLKHS-p Q15751;S1558-p QLESLSDSWARLKHS 0.912869099045042 0.0341637378727217 0.0383333333333333 -0.403 0.77227840655357 19.7565575770062 0.0383333333333333 -0.403 0.837090010659837 0.0105765552472086 0.215739163547332 -3.82337646327257 Q15751 HERC1 Q15751.S1558.p_HERC1 Q15751_S1558s _1_1_1558_1558 Q15751 Q15751 Probable E3 ubiquitin-protein ligase HERC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13748.13748.3 15.8 15.8 1.271 4 1 1 0 756.0254 2186.0974 S1558s TMT10 1545 (K) RGPMHSQLESLSDsWAR (L) RGPMHS(0.0)QLES(0.0)LS(0.0)DS(0.99)WAR s:Phosphorylated S HERC1 539122.1 1 10 269.1 394.57 HUMAN 1 0.7723 -19.7566 QLFQSHDSPVKAVAV-p F5H269;S2950-p QLFQSHDSPVKAVAV 0.16550315241392 0.542516204304714 -0.262333333333333 -0.059 15.6278429314292 3.57487151495337 -0.262333333333333 -0.059 0.0273662762630362 0.439048854610517 -2.99705399865163 -0.834809809809338 F5H269 DMXL1 F5H269.S2950.p_DMXL1 F5H269_S2950s _1_1_2950_2950 F5H269 F5H269|Q9Y485 DmX-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13227.13227.3 12.63 12.63 2.203 2 1 1 0 608.6525 1743.9794 S2950s TMT10 2943 (R) QLFQSHDsPVK (A) QLFQS(0.0)HDS(0.99)PVK K:TMT10,s:Phosphorylated S DMXL1 344060.7 1 17 523.1 283.18 HUMAN 1 -15.6278 -3.5749 QLGPSLRSPPRVISR-p Q8NHM5;S1018-p QLGPSLRSPPRVISR 0.807745252895015 0.0240742085490205 0.0343333333333333 -0.331 1.78146352458101 22.0571843319234 0.0343333333333333 -0.331 0.663519433979714 0.00622703872882837 0.459842615274526 -4.3304235225856 Q8NHM5 KDM2B Q8NHM5.S1018.p_KDM2B Q8NHM5_S1018s _1_1_1018_1018 Q8NHM5 Q8NHM5|Q8NHM5-3 Lysine-specific demethylase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7473.7473.3 12.29 7.04 1.131 2 1 1 0 551.9641 1573.9124 S1018s TMT10 1010 (R) HQLGPSLRsPPR (V) HQLGPS(0.0)LRS(0.99)PPR s:Phosphorylated S KDM2B 155065.3 2 8 800.1 223.19 HUMAN 1 1.7815 -22.0572 QLGQSEGSVSLSLVK-p Q9GZR2;S226-p QLGQSEGSVSLSLVK 0.405906564884755 0.420921030447781 -0.115 -0.173 7.22963971454431 5.00178186105468 -0.115 -0.173 0.189250061169742 0.316098047959974 -1.50115358511954 -1.104161398956 Q9GZR2 REXO4 Q9GZR2.S226.p_REXO4 Q9GZR2_S226s _1_1_226_226 Q9GZR2 Q9GZR2 RNA exonuclease 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23110.23110.3 15.44 15.78 1.172 4 1 1 0 690.7141 1990.1585 S226s TMT10 219 (K) QLGQSEGsVSLSLVK (E) QLGQS(0.0)EGS(0.99)VS(0.0)LS(0.0)LVK K:TMT10,s:Phosphorylated S REXO4 46899.2 2 3 1288.1 157.84 HUMAN 1 -7.2296 -5.0018 QLGTPQDSPELRQQL-p O15400;S45-p QLGTPQDSPELRQQL 0.361753568197081 0.0959899512192452 0.162 0.207666666666667 8.20600305356704 13.4589292569707 0.162 0.207666666666667 0.151147056735487 0.0450927866063024 1.67087895676257 2.59261880275435 O15400 STX7 O15400.S45.p_STX7 O15400_S45s _1_1_45_45 O15400 O15400|O15400-2 Syntaxin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17728.17728.3 19.67 19.67 2.34 3 1 1 0 987.5262 2880.5943 S45s TMT10 35 (R) TLNQLGTPQDsPELRQQLQQK (Q) T(0.0)LNQLGT(0.0)PQDS(0.99)PELRQQLQQK K:TMT10,s:Phosphorylated S STX7 29929.1 3 2 1215.1 165.8 HUMAN 1 8.206 13.4589 QLHGRSESFSSEDLI-p Q9P219;S1601-p QLHGRSESFSSEDLI 0.828387144745791 0.86750663126899 -0.0326666666666667 0.0226666666666667 1.5703323140044 0.868581432100875 -0.0326666666666667 0.0226666666666667 0.696573211593831 0.81873217295427 -0.411396851678583 0.240557331934841 Q9P219 CCDC88C Q9P219.S1601.p_CCDC88C Q9P219_S1601s _1_1_1601_1601 Q9P219 Q9P219|Q9P219-2|A0A0A0MR69|Q9P219-3 Protein Daple HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23631.23926.3 14.64 14.64 1.111 6 1 1 0 843.7534 2449.2772 S1601s TMT10 1599 (R) SEsFSSEDLIPSRDLATLPR (E) S(0.0)ES(0.99)FS(0.0)S(0.0)EDLIPS(0.0)RDLAT(0.0)LPR s:Phosphorylated S CCDC88C 229367.3 1 12 742.1 234.08 HUMAN 1 -1.5703 0.8686 QLHLEGASLELSDDD-p P35580-4;S1983-p QLHLEGASLELSDDD 0.800870952671538 0.0270287305178499 0.0403333333333333 0.307 1.8568093340249 21.2792087271268 0.0403333333333333 0.307 0.652107307002191 0.00744867674431737 0.476852635139151 4.15481104950106 P35580 MYH10 P35580.4.S1983.p_MYH10 P35580-4_S1983sS1987s_2_2_1983_1987 P35580-4 P35580-4|P35580-3|P35580-2|P35580-5 Isoform 4 of Myosin-10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22359.22359.3 18.53 18.53 3.631 4 2 2 0 902.4167 2545.3034 S1983s S1987s TMT10 1976 (R) QLHLEGAsLELsDDDTESK (T) QLHLEGAS(0.99)LELS(0.99)DDDT(0.0)ES(0.0)K K:TMT10,s:Phosphorylated S MYH10 233493.8 12 45 296.2 379.15 HUMAN 1 1.8568 21.2792 QLIDEQDSYIQSRAD-p Q13190;S264-p QLIDEQDSYIQSRAD 0.0775649771385732 0.344014877664781 0.387 -0.116 23.7430814677987 6.13922733989389 0.387 -0.116 0.00422368822804941 0.243263676478858 4.7323210557991 -1.30900986648029 Q13190 STX5 Q13190.S264.p_STX5 Q13190_S264s _1_1_264_264 Q13190 Q13190|Q13190-4|Q13190-2|Q13190-3 Syntaxin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19927.19927.3 19.64 16.26 4.909 5 1 1 0 821.0673 2381.2146 S264s TMT10 252 (R) TSQQLQLIDEQDsYIQSR (A) T(0.0)S(0.0)QQLQLIDEQDS(0.99)Y(0.0)IQS(0.0)R s:Phosphorylated S STX5 39785.9 1 3 3956.1 40.29 HUMAN 1 23.7431 -6.1392 QLIHDPVSPRGMVTR-p Q9Y2K7;S731-p QLIHDPVSPRGMVTR 0.374713726213654 0.261124506986789 0.120333333333333 0.119 7.89347649049128 7.68431230763232 0.120333333333333 0.119 0.162424803843527 0.1704389182896 1.61667604789688 1.57986443635329 Q9Y2K7 KDM2A Q9Y2K7.S731.p_KDM2A Q9Y2K7_T713tS731s_2_2_713_731 Q9Y2K7 Q9Y2K7|I3VM54|Q9Y2K7-2|Q9Y2K7-3|Q9Y2K7-5|Q9Y2K7-4 Lysine-specific demethylase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26332.26332.4 15.45 14.33 2.421 6 2 2 0 850.1464 3237.6234 T713t S731s TMT10 707 (R) SCDEPLtPPPHSPTSMLQLIHDPVsPR (G) S(0.0)CDEPLT(0.99)PPPHS(0.0)PT(0.0)S(0.0)MLQLIHDPVS(0.99)PR C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S KDM2A 135243.8 13 16 409.1 323.7 HUMAN 1 7.8935 7.6843 QLIIEDPYYGNDSDF-p P24666-2;Y132-p QLIIEDPYYGNDSDF 0.158297715435374 0.460503117901934 0.246666666666667 0.0703333333333334 16.0522871193355 4.4910625960648 0.246666666666667 0.0703333333333334 0.0248182576043714 0.355544316263099 3.07823640164704 1.00972086774468 P24666 ACP1 P24666.2.Y132.p_ACP1 P24666-2_Y132y _1_1_132_132 P24666-2 P24666|P24666-2|P24666-3 Isoform 2 of Low molecular weight phosphotyrosine protein phosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27114.27114.3 20.7 20.7 1.918 5 1 1 0 1087.8247 3181.4986 Y132y TMT10 125 (K) QLIIEDPyYGNDSDFETVYQQCVR (C) QLIIEDPY(0.99)Y(0.0)GNDS(0.0)DFET(0.0)VY(0.0)QQCVR C:Carbamidomethylation,y:Phosphorylated Y ACP1 18433.5 1 2 4373.1 32.54 HUMAN 1 16.0523 4.4911 QLILPGNSGNLKSSD-p Q9P270;S234-p QLILPGNSGNLKSSD 0.100942488788594 0.00550510630988842 -0.392333333333333 -0.549666666666667 21.0711470340609 32.7587379838042 -0.392333333333333 -0.549666666666667 0.00781421392725821 0.000529817381140076 -4.11269474013793 -7.30441191149449 Q9P270 SLAIN2 Q9P270.S234.p_SLAIN2 Q9P270_S234s _1_1_234_234 Q9P270 Q9P270|D6RIF6 SLAIN motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22100.22100.2 13.29 13.29 99 1 1 1 0 896.511 1712.0471 S234s TMT10 227 (K) QLILPGNsGNLK (S) QLILPGNS(1.0)GNLK K:TMT10,s:Phosphorylated S SLAIN2 62770.5 2 10 277.1 389.63 HUMAN 1 -21.0711 -32.7587 QLIMQRATP______-p Q8NBT0;T406-p QLIMQRATP______ 0.963050595136198 0.0578764891867149 0.0106666666666667 -0.253666666666667 0.314705290427089 16.486312538154 0.0106666666666667 -0.253666666666667 0.930099628603088 0.0224578794447097 0.0918791967427423 -3.15981595065072 Q8NBT0 POC1A Q8NBT0.T406.p_POC1A Q8NBT0_T406t _1_1_406_406 Q8NBT0 Q8NBT0|Q8NBT0-3|Q8NBT0-2 POC1 centriolar protein homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16675.16675.3 15.67 15.67 99 1 1 1 0 713.6821 2059.0626 T406t TMT10 393 (K) QCLENQQLIMQRAtP (-) QCLENQQLIMQRAT(1.0)P C:Carbamidomethylation,t:Phosphorylated T POC1A 45578.6 3 1 5874.1 15.67 HUMAN 1 0.3147 -16.4863 QLKDAHRSHPFIKEY-p M0QXB4;S306-p QLKDAHRSHPFIKEY 0.403291205135298 0.159267083676219 -0.131333333333333 0.196 7.28052125468719 10.4953234535254 -0.131333333333333 0.196 0.187045762834472 0.0892211167075443 -1.51003312883634 2.06702905936709 M0QXB4 COPE M0QXB4.S306.p_COPE M0QXB4_S306s _1_1_306_306 M0QXB4 M0QXB4 Coatomer protein complex, subunit epsilon, isoform CRA_g HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.6313.6313.4 12.79 9.22 99 1 1 1 0 437.237 1665.9589 S306s TMT10 302 (K) DAHRsHPFIK (E) DAHRS(1.0)HPFIK K:TMT10,s:Phosphorylated S COPE 37094.2 1 3 2437.1 83.45 HUMAN 1 -7.2805 10.4953 QLKEKKESGENPPPK-p O95239;S787-p QLKEKKESGENPPPK 0.1675025767406 0.740110122995943 0.233 0.0366666666666667 15.5042507518125 1.8017406134467 0.233 0.0366666666666667 0.02815625727155 0.660428701039536 2.97356970970574 0.464382230749211 O95239 KIF4A O95239.S787.p_KIF4A O95239_S787s _1_1_787_787 O95239 O95239|O95239-2 Chromosome-associated kinesin KIF4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5982.5982.4 9.1 5.95 99 1 1 1 0 584.8311 2256.3369 S787s TMT10 783 (K) EKKEsGENPPPK (L) EKKES(1.0)GENPPPK K:TMT10,s:Phosphorylated S KIF4A 141476.1 1 3 516.1 285.41 HUMAN 1 15.5043 1.8017 QLKPGGDSSSSLDSS-p Q8TF40;S96-p QLKPGGDSSSSLDSS 0.916228723727521 0.0330183593605983 0.0173333333333333 -0.370666666666667 0.740990688533251 19.9740980062824 0.0173333333333333 -0.370666666666667 0.843142402847625 0.0100598197544193 0.207584207029563 -3.86977860030822 Q8TF40 FNIP1 Q8TF40.S96.p_FNIP1 Q8TF40_S96s _1_1_96_96 Q8TF40 Q8TF40|Q8TF40-3|Q8TF40-2 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17560.17560.4 9.2 9.2 1.146 10 1 1 0 1061.5231 4163.1076 S96s TMT10 87 (K) CCQLKPGGDsSSSLDSSVTSSSDIKDQCLK (Y) CCQLKPGGDS(0.99)S(0.0)S(0.0)S(0.0)LDS(0.0)S(0.0)VT(0.0)S(0.0)S(0.0)S(0.0)DIKDQCLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FNIP1 132549.9 2 1 310.1 372.19 HUMAN 1 0.741 -19.9741 QLKSRLLSPLSSARL-p Q8IY67-2;S567-p QLKSRLLSPLSSARL 0.493908641985079 0.0474245919623707 -0.149333333333333 -0.541 5.64141476881816 17.7148748286025 -0.149333333333333 -0.541 0.27280889288074 0.0169243702278 -1.22041069414817 -3.40205987584535 Q8IY67 RAVER1 Q8IY67.2.S567.p_RAVER1 Q8IY67-2_S567s _1_1_567_567 Q8IY67-2 E9PAU2|Q8IY67-2|A0A087WZ13 Isoform 2 of Ribonucleoprotein PTB-binding 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15186.15186.2 10.39 6.92 10.388 3 1 1 0 512.266 943.5571 S567s Hydrogen 565 (R) LLsPLSSAR (L) LLS(0.99)PLS(0.0)S(0.0)AR s:Phosphorylated S RAVER1 78371.6 3 6 785.1 225.39 HUMAN 1 -5.6414 -17.7149 QLLGQRESPGELISK-p Q8WXH0;S873-p QLLGQRESPGELISK 0.492434952554336 0.603783523909784 0.094 0.066 5.66553059066835 2.97242155028315 0.094 0.066 0.27129821786865 0.504379985660706 1.22474323664947 0.714705434189849 Q8WXH0 SYNE2 Q8WXH0.S873.p_SYNE2 Q8WXH0_S873s _1_1_873_873 Q8WXH0 Q8WXH0-2|A0A0A0MRE3|G3V5X4 Nesprin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20364.20364.3 16.74 11.47 5.793 2 1 1 0 798.1065 2312.3338 S873s TMT10 864 (R) AQQLLGQREsPGELISK (H) AQQLLGQRES(0.99)PGELIS(0.0)K K:TMT10,s:Phosphorylated S SYNE2 802304.8 3 5 188.1 472.65 HUMAN 1 5.6655 2.9724 QLLKDSQSPNTATQR-p O14787;S22-p QLLKDSQSPNTATQR 0.62505371822897 0.105545643067195 0.0906666666666667 0.477666666666667 3.79018876870434 12.9011290159043 0.0906666666666667 0.477666666666667 0.417812205793533 0.0512728075044061 0.876805372867314 2.49191127512445 O14787 TNPO2 O14787.S22.p_TNPO2 O14787_S22s _1_1_22_22 O14787 O14787|O14787-2|A0A075B780|K7ESC1 Transportin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4100.4100.2 11.84 6.78 1.399 4 1 1 0 757.3471 1433.7182 S22s TMT10 19 (K) DSQsPNTATQR (I) DS(0.0)QS(0.99)PNT(0.0)AT(0.0)QR s:Phosphorylated S TNPO2 102926.8 1 1 4423.1 31.66 HUMAN 1 3.7902 12.9011 QLLKESQSPDTTIQR-p Q92973;S32-p QLLKESQSPDTTIQR 0.117289050573617 0.00233515862831773 0.326666666666667 0.776333333333333 19.3650451042919 40.472176086769 0.326666666666667 0.776333333333333 0.011574320113495 8.96979239226463e-05 3.74398781205834 10.3457958984443 Q92973 TNPO1 Q92973.S32.p_TNPO1 Q92973_S32s _1_1_32_32 Q92973 Q92973|Q92973-2|Q92973-3|E7EW37 Transportin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6343.6343.3 7.52 7.52 2.101 4 1 1 0 524.2497 1490.7648 S32s TMT10 29 (K) ESQsPDTTIQR (T) ES(0.0)QS(0.99)PDT(0.0)T(0.0)IQR s:Phosphorylated S TNPO1 103836.6 2 2 4746.1 27.12 HUMAN 1 19.365 40.4722 QLLTKQDSLDIYNER-p Q9ULQ0;S354-p QLLTKQDSLDIYNER 0.301224036518654 0.0758287532277242 -0.186333333333333 -0.375666666666667 9.78432339084326 14.8692760499599 -0.186333333333333 -0.375666666666667 0.10509151694577 0.0325891021092308 -1.94426326086006 -2.85212828699726 Q9ULQ0 STRIP2 Q9ULQ0.S354.p_STRIP2 Q9ULQ0_S354s _1_1_354_354 Q9ULQ0 Q9ULQ0|Q9ULQ0-2 Striatin-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19759.19759.3 8.55 8.55 8.551 3 1 1 0 792.0831 2294.2756 S354s TMT10 347 (R) QLLTKQDsLDIYNER (D) QLLT(0.0)KQDS(0.99)LDIY(0.0)NER K:TMT10,s:Phosphorylated S STRIP2 96327.7 1 2 4940.1 24.86 HUMAN 1 -9.7843 -14.8693 QLMAQEHSPPKPSSA-p A1L390;S1000-p QLMAQEHSPPKPSSA 0.284460902662854 0.0254035599852686 0.319666666666667 -0.331 10.302411140089 21.7074823734989 0.319666666666667 -0.331 0.0932736315322608 0.00674919168279807 2.03430207841653 -4.25093826082927 A1L390 PLEKHG3 A1L390.S1000.p_PLEKHG3 A1L390_S1000s _1_1_1000_1000 A1L390 A1L390|A1L390-3 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23402.23402.5 26.05 26.05 6.34 6 1 1 0 902.4674 4428.3411 S1000s TMT10 982 (K) RKPVLSLFDYEQLMAQEHsPPKPSSAGEMSPQR (F) RKPVLS(0.0)LFDY(0.0)EQLMAQEHS(0.99)PPKPS(0.0)S(0.0)AGEMS(0.0)PQR K:TMT10,s:Phosphorylated S PLEKHG3 135322.7 2 17 284.1 386.18 HUMAN 1 10.3024 -21.7075 QLMARIESYEGREKK-p O95772;S39-p QLMARIESYEGREKK 0.151118695717772 0.00539882296906826 0.238666666666667 0.820666666666667 16.5418111363578 32.9083688591645 0.238666666666667 0.820666666666667 0.022172715591885 0.000511874051174419 3.17292742261506 7.3550120494462 O95772 STARD3NL O95772.S39.p_STARD3NL O95772_S39s _1_1_39_39 O95772 O95772|O95772-2|C9JKL2 STARD3 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9607.9607.2 7.38 7.38 3.602 2 1 1 0 581.7715 1082.568 S39s TMT10 37 (R) IEsYEGR (E) IES(0.99)Y(0.0)EGR s:Phosphorylated S STARD3NL 26768.2 2 1 2931.1 65.68 HUMAN 1 16.5418 32.9084 QLMRQTFSPFGQIME-p Q01085;S226-p QLMRQTFSPFGQIME 0.620099263422354 0.0128313351438553 0.0663333333333333 0.380333333333333 3.85704176269452 26.3537457534828 0.0663333333333333 0.380333333333333 0.411429874969601 0.00231539677821618 0.889702472753235 5.38780989180723 Q01085 TIAL1 Q01085.S226.p_TIAL1 Q01085_S226s _1_1_226_226 Q01085 Q01085-2|P31483|F8W8I6|P31483-2|C9JTN7 Nucleolysin TIAR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31787.31787.3 15.24 12.02 1.139 2 1 1 0 621.6426 1782.941 S226s TMT10 223 (R) QTFsPFGQIMEIR (V) QT(0.0)FS(0.99)PFGQIMEIR s:Phosphorylated S TIAL1 41932.3 2 6 2599.1 77.13 HUMAN 1 3.857 26.3537 QLNEENLSTKTEAV_-p Q8WXA9-2;S618-p QLNEENLSTKTEAV_ 0.176433174076321 0.0274245396118315 0.236 0.342333333333333 14.9542100090984 21.185677917584 0.236 0.342333333333333 0.0319579563396398 0.00761083327447385 2.86986762484053 4.13399280367347 Q8WXA9 SREK1 Q8WXA9.2.S618.p_SREK1 Q8WXA9-2_S618s _1_1_618_618 Q8WXA9-2 Q8WXA9-2 Isoform 2 of Splicing regulatory glutamine/lysine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14001.14001.3 17.49 17.49 1.122 3 1 1 0 979.8105 2857.4514 S618s TMT10 604 (K) IQHNGNCQLNEENLsTKTEAV (-) IQHNGNCQLNEENLS(0.99)T(0.0)KT(0.0)EAV C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SREK1 71819.3 1 7 1303.1 156.21 HUMAN 1 14.9542 21.1857 QLNQTVGTNILPVNQ-p Q6IQ32;T573-p QLNQTVGTNILPVNQ 0.380643803112374 0.679253770653737 0.136 0.0623333333333334 7.74936110346538 2.29576751194361 0.136 0.0623333333333334 0.1679051007438 0.589417802318077 1.59164903455102 0.573279067945121 Q6IQ32 ADNP2 Q6IQ32.T573.p_ADNP2 Q6IQ32_T573t_1_1_573_573 Q6IQ32 Q6IQ32 Activity-dependent neuroprotector homeobox protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36541.36541.3 7.03 1.92 2.5 8 1 1 0 1467.1313 4317.388 T573t N574n N579n TMT10 562 (R) PGVLQLNQTVGtnILPVnQPVRPGASQNTTFLTSGSILR (Q) PGVLQLN(0.0)QT(0.0)VGT(0.99)N(0.99)ILPVN(0.99)QPVRPGAS(0.0)QN(0.0)T(0.0)T(0.0)FLT(0.0)S(0.0)GS(0.0)ILR t:Phosphorylated T,n:Deamidated ADNP2 124371.4 1 1 4402.1 31.96 HUMAN 1 7.7494 2.2958 QLNSGRQSPSQNERW-p P25054;S1042-p QLNSGRQSPSQNERW 0.420320976430283 0.0529773882018352 -0.124 -0.33 6.94401317817192 17.0152627854446 -0.124 -0.33 0.202115063399981 0.0198826249980694 -1.45120941385534 -3.26315226537864 P25054 APC P25054.S1042.p_APC P25054_S1038sS1042s_2_2_1038_1042 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7178.7178.3 10.89 9.25 1.157 5 2 2 0 828.6845 2324.1064 S1038s S1042s TMT10 1031 (K) YSDEQLNsGRQsPSQNER (W) Y(0.0)S(0.0)DEQLNS(0.99)GRQS(0.99)PS(0.0)QNER s:Phosphorylated S APC 313808.5 1 57 33.1 890.71 HUMAN 1 -6.944 -17.0153 QLPGRPKSPLSKMAQ-p Q9HCD6-2;S1589-p QLPGRPKSPLSKMAQ 0.834327857608735 0.337427848223536 0.0483333333333333 -0.095 1.5173572212317 6.25053709998147 0.0483333333333333 -0.095 0.705122020914161 0.23710804516436 0.399050443010713 -1.32874592923557 Q9HCD6 TANC2 Q9HCD6.2.S1589.p_TANC2 Q9HCD6-2_S1589s _1_1_1589_1589 Q9HCD6-2 Q9HCD6-2 Isoform 2 of Protein TANC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14148.14148.5 9.79 9.79 1.473 6 1 1 0 600.3331 2917.6714 S1589s TMT10 1574 (R) YQQETSVSQLPGRPKsPLSK (M) Y(0.0)QQET(0.0)S(0.0)VS(0.0)QLPGRPKS(0.99)PLS(0.0)K K:TMT10,s:Phosphorylated S TANC2 222282.4 7 13 348.1 351.89 HUMAN 1 1.5174 -6.2505 QLPHLQRSPPDGQSF-p P78314-4;S473-p QLPHLQRSPPDGQSF 0.0949352610946194 0.286154705629868 -0.39 -0.117666666666667 21.6835049774603 7.16958398324304 -0.39 -0.117666666666667 0.00678655701858032 0.191885254143496 -4.24992779146161 -1.49024479504065 P78314 SH3BP2 P78314.4.S473.p_SH3BP2 P78314-4_S473s _1_1_473_473 P78314-4 P78314-4|P78314-3 Isoform 4 of SH3 domain-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14848.14848.5 15.13 15.13 5.726 2 1 1 0 652.1511 3176.7643 S473s Hydrogen 456 (R) PAVLPRPEKPQLPHLQRsPPDGQSFR (S) PAVLPRPEKPQLPHLQRS(0.99)PPDGQS(0.0)FR K:TMT10-Lys-Only,s:Phosphorylated S SH3BP2 68698.6 3 4 1751.1 117.58 HUMAN 1 -21.6835 -7.1696 QLPITYPSAEEDLAS-p Q8NDX5-7;S874-p QLPITYPSAEEDLAS 0.681222809414458 0.264884975853762 0.0663333333333333 0.118333333333333 3.12886921863556 7.59874218217031 0.0663333333333333 0.118333333333333 0.486533869012733 0.173830420917973 0.74646772296795 1.56499510900058 Q8NDX5 PHC3 Q8NDX5.7.S874.p_PHC3 Q8NDX5-7_S874s _1_1_874_874 Q8NDX5-7 Q8NDX5-7|Q8NDX5-2 Isoform 7 of Polyhomeotic-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23592.23592.4 21.44 21.44 3.308 8 1 1 0 814.3832 3174.5462 S874s TMT10 867 (R) QLPITYPsAEEDLASHEDSVPSAMTTR (L) QLPIT(0.0)Y(0.0)PS(0.99)AEEDLAS(0.0)HEDS(0.0)VPS(0.0)AMT(0.0)T(0.0)R s:Phosphorylated S PHC3 108276.8 4 14 439.1 312.22 HUMAN 1 3.1289 7.5987 QLPKTAPSPLVEAKD-p Q8TEH3;S473-p QLPKTAPSPLVEAKD 0.428800530001446 0.79843738436681 -0.111666666666667 -0.0303333333333333 6.77057634148089 1.36783399123946 -0.111666666666667 -0.0303333333333333 0.210349927104987 0.729821412053461 -1.42079098023129 -0.363722506819811 Q8TEH3 DENND1A Q8TEH3.S473.p_DENND1A Q8TEH3_S473s _1_1_473_473 Q8TEH3 Q8TEH3-7|Q8TEH3-2|Q8TEH3-5|Q8TEH3-3|Q8TEH3-4 DENN domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15125.15125.3 13.48 9.78 1.811 2 1 1 0 707.4036 2040.2308 S473s TMT10 470 (K) TAPsPLVEAKDPK (L) T(0.0)APS(0.99)PLVEAKDPK K:TMT10,s:Phosphorylated S DENND1A 111202.8 4 1 882.1 207.04 HUMAN 1 -6.7706 -1.3678 QLPLEPESPSGQVGP-p Q3KQU3;S70-p QLPLEPESPSGQVGP 0.332581907339084 0.00273649503124045 -0.139666666666667 -0.696666666666667 8.92575439520767 38.8632340695652 -0.139666666666667 -0.696666666666667 0.128063262175187 0.000129920173851135 -1.79551051053725 -9.6316314439964 Q3KQU3 MAP7D1 Q3KQU3.S70.p_MAP7D1 Q3KQU3_S70s _1_1_70_70 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17839.17839.3 17.62 14.26 1.93 5 1 1 0 1221.9515 3583.8644 S70s TMT10 63 (K) QLPLEPEsPSGQVGPRPAPPQEESPSSEAK (S) QLPLEPES(0.99)PS(0.0)GQVGPRPAPPQEES(0.0)PS(0.0)S(0.0)EAK K:TMT10,s:Phosphorylated S MAP7D1 93160.6 2 2 160.1 495.56 HUMAN 1 -8.9258 -38.8632 QLPLRPKSVDFDSLT-p Q9Y5K6;S458-p QLPLRPKSVDFDSLT 0.470110243897234 0.0035258080229617 -0.198333333333333 -0.665333333333333 6.05060137147417 36.6497955222492 -0.198333333333333 -0.665333333333333 0.248278928742663 0.000216282035284263 -1.29357279857977 -8.72186721519807 Q9Y5K6 CD2AP Q9Y5K6.S458.p_CD2AP Q9Y5K6_S458s _1_1_458_458 Q9Y5K6 Q9Y5K6 CD2-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21143.21143.3 15.16 15.16 5.899 3 1 1 0 483.2388 1367.7368 S458s TMT10 458 (K) sVDFDSLTVR (T) S(0.99)VDFDS(0.0)LT(0.0)VR s:Phosphorylated S CD2AP 71678 10 6 413.1 321.76 HUMAN 1 -6.0506 -36.6498 QLPLTPLTPTPRVLL-p Q96PN7;T746-p QLPLTPLTPTPRVLL 0.781783194314642 0.606392025785509 -0.0483333333333333 -0.0553333333333333 2.05155153267078 2.94872593783605 -0.0483333333333334 -0.0553333333333333 0.623512043765999 0.507139462740255 -0.520188469540882 -0.709879918069678 Q96PN7 TRERF1 Q96PN7.T746.p_TRERF1 Q96PN7_T743tT746t_2_2_743_746 Q96PN7 Q96PN7 Transcriptional-regulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28583.28583.4 20.14 20.14 1.781 6 2 2 0 909.7131 3475.9011 T743t T746t TMT10 719 (R) QGSGLFSNVLISGHGPGAHPQLPLtPLtPTPR (V) QGS(0.0)GLFS(0.0)NVLIS(0.0)GHGPGAHPQLPLT(0.99)PLT(0.99)PT(0.0)PR t:Phosphorylated T TRERF1 132995.3 1 11 1115.1 175.65 HUMAN 1 -2.0516 -2.9487 QLPPGDYSTTPGGTL-p Q13541;S35-p QLPPGDYSTTPGGTL 0.43497101841619 0.19648380456525 -0.105666666666667 -0.128666666666667 6.66069917688693 9.2952926413093 -0.105666666666667 -0.128666666666667 0.215739705876055 0.117617172785657 -1.40147965006559 -1.85879950807552 Q13541 EIF4EBP1 Q13541.S35.p_EIF4EBP1 Q13541_Y34yS35s_2_2_34_35 Q13541 Q13541 Eukaryotic translation initiation factor 4E-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28560.28784.4 10.71 9.32 1.128 10 2 2 0 1114.3145 4294.3124 Y34y S35s TMT10 21 (R) VVLGDGVQLPPGDysTTPGGTLFSTTPGGTRIIYDRK (F) VVLGDGVQLPPGDY(0.99)S(0.99)T(0.0)T(0.0)PGGT(0.0)LFS(0.0)T(0.0)T(0.0)PGGT(0.0)RIIY(0.0)DRK K:TMT10,y:Phosphorylated Y,s:Phosphorylated S EIF4EBP1 12693.9 209 8 227.1 424.6 HUMAN 1 -6.6607 -9.2953 QLQAPERSPDDSSPS-p A8MYZ6;S210-p QLQAPERSPDDSSPS 0.132590951458851 0.597637093722794 0.309666666666667 -0.0936666666666667 18.1110096241737 3.02682254464912 0.309666666666667 -0.0936666666666667 0.0154489524894981 0.498101380664464 3.48476640521219 -0.725752627259109 A8MYZ6 NotFound A8MYZ6.S210.p_NotFound A8MYZ6_S210s _1_1_210_210 A8MYZ6 A8MYZ6 Forkhead box protein O6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14769.14769.4 16.19 16.19 1.17 4 1 1 0 795.6576 3099.6475 S210s TMT10 203 (K) QLQAPERsPDDSSPSAPAPGPVPAAAK (W) QLQAPERS(0.99)PDDS(0.0)S(0.0)PS(0.0)APAPGPVPAAAK K:TMT10,s:Phosphorylated S FOXO6 50822.2 1 2 2524.1 80 HUMAN 1 18.111 -3.0268 QLQDLDCSSSDDEGA-p P08240;S296-p QLQDLDCSSSDDEGA 0.936107507392066 0.246102119630895 0.0123333333333333 -0.168666666666667 0.560384180505396 8.02353505021457 0.0123333333333333 -0.168666666666667 0.878944761208254 0.157632765543264 0.159652824087857 -1.63872205932986 P08240 SRPR P08240.S296.p_SRPR P08240_S296sS297sS298s_3_3_296_298 P08240 P08240|P08240-2 Signal recognition particle receptor subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14386.15007.4 27.22 27.22 11.98 9 3 3 0 1024.9476 3856.871 S296s S297s S298s TMT10 283 (R) GTGSGGQLQDLDCsssDDEGAAQNSTKPSATK (G) GT(0.0)GS(0.0)GGQLQDLDCS(0.99)S(0.99)S(0.99)DDEGAAQNS(0.0)T(0.0)KPS(0.0)AT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SRPRA 70266.4 20 11 1857.1 110.87 HUMAN 1 0.5604 -8.0235 QLQELTKTP______-p P51825-2;T1217-p QLQELTKTP______ 0.951125463979824 0.467775843895483 0.00933333333333332 -0.0846666666666667 0.430011895937402 4.39856094945855 0.00933333333333333 -0.0846666666666667 0.905730119972465 0.363198381936744 0.124080960660924 -0.992407931356909 P51825 AFF1 P51825.2.T1217.p_AFF1 P51825-2_T1217t _1_1_1217_1217 P51825-2 P51825-2|P51825-3 Isoform 2 of AF4/FMR2 family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23222.23222.2 11.72 11.72 1.561 2 1 1 0 1028.5529 1976.1217 T1217t TMT10 1206 (R) QGFQQLQELTKtP (-) QGFQQLQELT(0.0)KT(0.99)P K:TMT10,t:Phosphorylated T AFF1 133180 2 8 1199.1 167.15 HUMAN 1 0.43 -4.3986 QLQKYMEYSTKKVSD-p P23743;Y22-p QLQKYMEYSTKKVSD 0.120139725397482 0.00421471655656868 -0.502666666666667 0.642333333333333 19.1335762076655 34.9420509257158 -0.502666666666667 0.642333333333333 0.012207939806119 0.000320475554341108 -3.69542423718963 8.07290460499065 P23743 DGKA P23743.Y22.p_DGKA P23743_Y22y _1_1_22_22 P23743 P23743|P23743-3|P23743-2 Diacylglycerol kinase alpha GG20160819_MSz_CCLE_T4D7_pY_Injection_01.13228.13266.2 11.83 11.83 1.136 4 1 1 0 730.3505 1379.7281 Y22y TMT10 19 (K) YMEySTK (K) Y(0.0)MEY(0.99)S(0.0)T(0.0)K K:TMT10,y:Phosphorylated Y DGKA 83998.1 1 1 299.1 11.83 HUMAN 1 -19.1336 34.9421 QLQRLSFSVSRDGAS-p Q8N983-7;S32-p QLQRLSFSVSRDGAS 0.672358497278125 0.0211618529756009 0.062 0.34 3.22816743043954 22.9040828775373 0.062 0.34 0.47553584296922 0.00512379460701843 0.766386621688796 4.52674663876501 Q8N983 MRPL43 Q8N983.7.S32.p_MRPL43 Q8N983-7_S32s _1_1_32_32 Q8N983-7 Q8N983-7|Q8N983-6|Q8N983-2|B1AL05|Q8N983-3|Q8N983-4|M0R051 Isoform 6 of 39S ribosomal protein L43, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17834.17834.2 9.43 9.43 1.63 3 1 1 0 552.7864 1024.5989 S32s TMT10 29 (R) LSFsVSR (D) LS(0.0)FS(0.99)VS(0.0)R s:Phosphorylated S MRPL43 29302.8 1 1 5352.1 20.15 HUMAN 1 3.2282 22.9041 QLRAELASAGGWPPL-p D6RFE6;S45-p QLRAELASAGGWPPL 0.561252574128087 0.0870709418155127 -0.183666666666667 0.529333333333333 4.61857491768373 14.0341900632945 -0.183666666666667 0.529333333333333 0.345257012464425 0.0394985355202644 -1.03367199230069 2.69757499666618 D6RFE6 NotFound D6RFE6.S45.p_NotFound D6RFE6_S45s _1_1_45_45 D6RFE6 D6RFE6 Protein RMD5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20922.20922.5 7.68 3.75 5.672 4 1 1 0 983.5013 4833.4632 S45s TMT10 28 (R) SLEELLHYVGQLRAELAsAGGWPPLQVPCDSLPEDMGDPK (L) S(0.0)LEELLHY(0.0)VGQLRAELAS(0.99)AGGWPPLQVPCDS(0.0)LPEDMGDPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RMND5B 8911 1 1 7108.1 7.68 HUMAN 1 -4.6186 14.0342 QLRGRPPSSYSRSLP-p O75145;S503-p QLRGRPPSSYSRSLP 0.267135773110571 0.369183399444824 -0.199 -0.091 10.8623695742924 5.74068914929786 -0.199 -0.091 0.0819904070599022 0.266643551432224 -2.13201468583938 -1.23794578757511 O75145 PPFIA3 O75145.S503.p_PPFIA3 O75145_S503s _1_1_503_503 O75145 O75145 Liprin-alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3917.3917.3 8.22 8.22 1.111 4 1 1 0 439.2173 1235.6694 S503s TMT10 499 (R) GRPPsSYSR (S) GRPPS(0.99)S(0.0)Y(0.0)S(0.0)R s:Phosphorylated S PPFIA3 134064.6 1 6 248.2 410.18 HUMAN 1 -10.8624 -5.7407 QLRRYGLSPGPVTES-p Q9Y2U8;S27-p QLRRYGLSPGPVTES 0.843942307663143 0.00972091684526735 0.0286666666666667 -0.411666666666667 1.4265018858379 28.3336119092623 0.0286666666666667 -0.411666666666667 0.72002870641512 0.00146770511942361 0.377686713647406 -5.93199099835295 Q9Y2U8 LEMD3 Q9Y2U8.S27.p_LEMD3 Q9Y2U8_S27s _1_1_27_27 Q9Y2U8 Q9Y2U8 Inner nuclear membrane protein Man1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17516.17516.4 16.92 12.2 5.459 6 1 1 0 665.3668 2578.4757 S27s TMT10 23 (R) RYGLsPGPVTESTRPVYLK (K) RY(0.0)GLS(0.99)PGPVT(0.0)ES(0.0)T(0.0)RPVY(0.0)LK K:TMT10,s:Phosphorylated S LEMD3 100851.5 2 2 412.1 321.94 HUMAN 1 1.4265 -28.3336 QLRVSPATPKARAGE-p J3KNZ9;T804-p QLRVSPATPKARAGE 0.480067243784759 0.605866104518387 0.133333333333333 -0.0816666666666667 5.86748819006503 2.95339841982725 0.133333333333333 -0.0816666666666667 0.258971028146871 0.506594135580631 1.26092152778621 -0.710832112958251 J3KNZ9 FBRS J3KNZ9.T804.p_FBRS J3KNZ9_T804t _1_1_804_804 J3KNZ9 J3KNZ9|Q9HAH7-1 Probable fibrosin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8395.8395.2 10.1 5.84 1.67 2 1 1 0 619.3523 1157.7294 T804t TMT10 800 (R) VSPAtPK (A) VS(0.0)PAT(0.99)PK K:TMT10,t:Phosphorylated T FBRS 104109.7 1 9 767.1 229.08 HUMAN 1 5.8675 -2.9534 QLRWRSNSLNNGQPK-p O60333-3;S1053-p QLRWRSNSLNNGQPK 0.139286671509888 0.00203605351766751 -0.322333333333333 -0.801 17.5272944186793 42.028555152247 -0.322333333333333 -0.801 0.0176713837521858 6.26822366573815e-05 -3.36722259336721 -11.0825034346217 O60333 KIF1B O60333.3.S1053.p_KIF1B O60333-3_S1053s _1_1_1053_1053 O60333-3 O60333-3 Isoform 3 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6256.6256.2 13.08 6.8 2.232 2 1 1 0 798.9102 1516.8484 S1053s TMT10 1051 (R) SNsLNNGQPK (S) S(0.0)NS(0.99)LNNGQPK K:TMT10,s:Phosphorylated S KIF1B 131388.1 4 16 606.2 262.24 HUMAN 1 -17.5273 -42.0286 QLSDHTRSEQCYRDV-p O95461;S366-p QLSDHTRSEQCYRDV 0.603140826850623 0.0198070948003416 -0.0716666666666667 0.319 4.05544042222393 23.3681038292127 -0.0716666666666667 0.319 0.393057382557897 0.00460457569830124 -0.927712356186199 4.63668913279023 O95461 LARGE O95461.S366.p_LARGE O95461_S366s _1_1_366_366 O95461 O95461|B7ZB85 LARGE xylosyl- and glucuronyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33624.33624.4 7.67 3 6.431 4 1 1 0 750.6321 2919.5187 S366s Hydrogen 366 (R) sEQCYRDVSDLKVIHWNSPK (K) S(0.99)EQCY(0.0)RDVS(0.0)DLKVIHWNS(0.0)PK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S LARGE1 88749.1 1 1 7112.1 7.67 HUMAN 1 -4.0554 23.3681 QLSEGRNSPEKAENK-p Q5VUA4;S1243-p QLSEGRNSPEKAENK 0.172802820076743 0.00752314179680432 -0.318666666666667 0.502333333333333 15.1823548858662 30.339259589248 -0.318666666666667 0.502333333333333 0.0303224655569086 0.000924855835355611 -2.91272247285285 6.52551414858876 Q5VUA4 ZNF318 Q5VUA4.S1243.p_ZNF318 Q5VUA4_S1243s _1_1_1243_1243 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11815.11815.3 13.54 10.43 4.593 2 1 1 0 714.0277 2060.1024 S1243s TMT10 1233 (K) LEDQLSEGRNsPEK (A) LEDQLS(0.0)EGRNS(0.99)PEK K:TMT10,s:Phosphorylated S ZNF318 252762.4 14 19 37.1 870.88 HUMAN 1 -15.1824 30.3393 QLSETEGSGEDEPGN-p Q13107;S680-p QLSETEGSGEDEPGN 0.780946211493183 0.00360332108061802 -0.043 0.643666666666667 2.0638659293871 36.3426177860548 -0.043 0.643666666666667 0.621746582873952 0.000232133714794486 -0.522899609610775 8.601863592397 Q13107 USP4 Q13107.S680.p_USP4 Q13107_S680s _1_1_680_680 Q13107 Q13107|Q13107-2 Ubiquitin carboxyl-terminal hydrolase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11073.11073.3 18.63 18.63 3.175 6 1 1 0 1034.7943 3022.4013 S680s TMT10 672 (K) EQLSETEGsGEDEPGNDPSETTQK (K) EQLS(0.0)ET(0.0)EGS(0.99)GEDEPGNDPS(0.0)ET(0.0)T(0.0)QK K:TMT10,s:Phosphorylated S USP4 110046.5 2 3 2061.1 100 HUMAN 1 -2.0639 36.3426 QLSKWPGSPTSRSSD-p O43524;S294-p QLSKWPGSPTSRSSD 0.0360961121648541 0.00799594721155976 0.706666666666667 0.613666666666667 33.149268937487 29.8962704242587 0.706666666666667 0.613666666666667 0.000484253876807881 0.00102417213951099 7.45054412189963 6.39054226215841 O43524 FOXO3 O43524.S294.p_FOXO3 O43524_S294s _1_1_294_294 O43524 O43524|O43524-2 Forkhead box protein O3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18639.18639.3 16.83 16.83 2 8 1 1 0 1108.2191 3242.6694 S294s TMT10 272 (K) AALQTAPESADDSPSQLSKWPGsPTSR (S) AALQT(0.0)APES(0.0)ADDS(0.0)PS(0.0)QLS(0.0)KWPGS(0.99)PT(0.0)S(0.0)R K:TMT10,s:Phosphorylated S FOXO3 71560.7 4 6 938.1 198.15 HUMAN 1 33.1493 29.8963 QLSQRGGSGAPILLR-p M0QXB5;S19-p QLSQRGGSGAPILLR 0.110770767596798 0.0490434175340851 -0.341333333333333 -0.429 19.9990501626746 17.5152558145563 -0.341333333333333 -0.429 0.0100021873204498 0.017720436625253 -3.87874652510996 -3.36215857029495 M0QXB5 NotFound M0QXB5.S19.p_NotFound M0QXB5_S19s _1_1_19_19 M0QXB5 M0QXB5|O95571|M0QY80|M0QX80 Persulfide dioxygenase ETHE1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17506.17506.2 9.21 9.21 99 1 1 1 0 625.3469 1169.7204 S19s TMT10 17 (R) GGsGAPILLR (Q) GGS(1.0)GAPILLR s:Phosphorylated S ETHE1 28900.3 2 1 5424.1 19.45 HUMAN 1 -19.9991 -17.5153 QLSTPAASPSASEPR-p Q5XUX1;S59-p QLSTPAASPSASEPR 0.338303322331957 0.0800508953015047 -0.147 0.300333333333333 8.76290066567645 14.5522993351865 -0.147 0.300333333333333 0.132956610022936 0.0350566220507609 -1.76732071496847 2.79314234638381 Q5XUX1 FBXW9 Q5XUX1.S59.p_FBXW9 Q5XUX1_S59s _1_1_59_59 Q5XUX1 Q5XUX1|Q5XUX1-2|Q5XUX1-3|K7EL01 F-box/WD repeat-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16095.16095.4 20.38 20.38 3.858 8 1 1 0 678.3417 2630.3736 S59s TMT10 43 (K) SGLAFSRPSQLSTPAAsPSASEPR (A) S(0.0)GLAFS(0.0)RPS(0.0)QLS(0.0)T(0.0)PAAS(0.99)PS(0.0)AS(0.0)EPR s:Phosphorylated S FBXW9 54798.8 4 2 2578.1 77.92 HUMAN 1 -8.7629 14.5523 QLTERIRSIEALLEA-p Q9P2E9;S959-p QLTERIRSIEALLEA 0.511044186685892 0.108536372761378 0.0913333333333333 0.182333333333333 5.38952251007108 12.7416259686999 0.0913333333333333 0.182333333333333 0.289099771887263 0.0531909078878847 1.17498537065743 2.46329235965174 Q9P2E9 RRBP1 Q9P2E9.S959.p_RRBP1 Q9P2E9_S959s _1_1_959_959 Q9P2E9 Q9P2E9|A0A0A0MRV0|Q9P2E9-2|Q9P2E9-3|A0A087WVV2|F8W7S5 Ribosome-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27858.27858.3 18.26 18.26 99 1 1 1 0 612.6691 1756.0278 S959s TMT10 957 (R) IRsIEALLEAGQAR (D) IRS(1.0)IEALLEAGQAR s:Phosphorylated S RRBP1 152868.9 4 14 479.1 299.08 HUMAN 1 5.3895 12.7416 QLTYGNVSPIQTSAS-p Q6PIY7;S62-p QLTYGNVSPIQTSAS 0.359210525316319 0.0590217475442339 0.138333333333333 0.240333333333333 8.2622329624239 16.3733563415441 0.138333333333333 0.240333333333333 0.149202707377975 0.0230496516274123 1.68062306347261 3.13792920908211 Q6PIY7 PAPD4 Q6PIY7.S62.p_PAPD4 Q6PIY7_S62s _1_1_62_62 Q6PIY7 Q6PIY7|Q6PIY7-2|D6RAF2 Poly(A) RNA polymerase GLD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30969.30969.3 15.77 15.77 1.381 7 1 1 0 962.8369 2806.5301 S62s TMT10 50 (R) AVSLQQLTYGNVsPIQTSASPLFR (G) AVS(0.0)LQQLT(0.0)Y(0.0)GNVS(0.99)PIQT(0.0)S(0.0)AS(0.0)PLFR s:Phosphorylated S PAPD4 56540.1 2 1 3027.1 62.87 HUMAN 1 8.2622 16.3734 QLVEDRGSGRSRGRG-p P17844;S480-p QLVEDRGSGRSRGRG 0.168210601929357 0.00883040673117586 -0.226333333333333 -0.515333333333333 15.4505326817537 29.1130285573523 -0.226333333333333 -0.515333333333333 0.0285066859870982 0.00122658357344043 -2.96338381275395 -6.15735256914497 P17844 DDX5 P17844.S480.p_DDX5 P17844_S480s _1_1_480_480 P17844 P17844|J3KTA4|P17844-2 Probable ATP-dependent RNA helicase DDX5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21149.21149.3 13.64 13.64 99 1 1 1 0 551.2961 1571.9067 S480s TMT10 471 (K) LLQLVEDRGsGR (S) LLQLVEDRGS(1.0)GR s:Phosphorylated S DDX5 69660.3 2 12 2075.1 99 HUMAN 1 -15.4505 -29.113 QLYAKFGSNINLEAD-p Q9NQP4;S125-p QLYAKFGSNINLEAD 0.998250411735214 0.632429275262826 0.000333333333333324 -0.0453333333333333 0.0115663310400047 2.70413016333776 0.000333333333333346 -0.0453333333333333 0.997340297150423 0.536521319082472 0.00349018729087465 -0.659561848817261 Q9NQP4 PFDN4 Q9NQP4.S125.p_PFDN4 Q9NQP4_S125s _1_1_125_125 Q9NQP4 Q9NQP4 Prefoldin subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22996.22996.2 11.06 11.06 3.183 2 1 1 0 802.858 1524.7379 S125s TMT10 123 (K) FGsNINLEADES (-) FGS(0.99)NINLEADES(0.0) s:Phosphorylated S PFDN4 15428.1 2 3 4182.1 35.86 HUMAN 1 0.0116 -2.7041 QMAEVLPSPRGQRVI-p P11388-2;S1239-p QMAEVLPSPRGQRVI 0.970811478408808 0.0038848496047803 0.00566666666666666 -0.572666666666667 0.252937368722341 35.5963710358301 0.00566666666666666 -0.572666666666667 0.943422572684725 0.000275653109831887 0.0743243559155086 -8.31637021019822 P11388 TOP2A P11388.2.S1239.p_TOP2A P11388-2_S1239s _1_1_1239_1239 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16256.16667.3 15.49 15.49 15.489 2 1 1 0 513.26 1457.7984 S1239s TMT10 1231 (K) TQMAEVLPsPR (G) T(0.0)QMAEVLPS(0.99)PR s:Phosphorylated S TOP2A 178239.3 17 7 71.2 658.36 HUMAN 1 0.2529 -35.5964 QMAGTPITPLKDGFT-p Q9H8Y8-3;T237-p QMAGTPITPLKDGFT 0.108049516126761 0.0433470262931705 -0.711 -0.241 20.3559494872228 18.2621836736775 -0.711 -0.241 0.0092130844334177 0.0149204400711979 -3.95576080815166 -3.51259326130196 Q9H8Y8 GORASP2 Q9H8Y8.3.T237.p_GORASP2 Q9H8Y8-3_T237t _1_1_237_237 Q9H8Y8-3 Q9H8Y8-3|Q9H8Y8-2 Isoform 3 of Golgi reassembly-stacking protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27795.27795.3 21.9 21.9 2.626 3 1 1 0 721.406 2082.2397 T237t TMT10 225 (K) ISLPGQMAGTPItPLK (D) IS(0.0)LPGQMAGT(0.0)PIT(0.99)PLK K:TMT10,t:Phosphorylated T GORASP2 48958.5 8 3 992.1 191.2 HUMAN 1 -20.3559 -18.2622 QMALTGISPPLAQSP-p Q9NZC9;S123-p QMALTGISPPLAQSP 0.92444376518297 0.0892889754855243 -0.0146666666666667 0.220333333333333 0.672082280176696 13.8841878776759 -0.0146666666666667 0.220333333333333 0.856627026019991 0.0408866202155918 -0.189472334744803 2.67009403528752 Q9NZC9 SMARCAL1 Q9NZC9.S123.p_SMARCAL1 Q9NZC9_S123s _1_1_123_123 Q9NZC9 Q9NZC9 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.26124.26124.3 16.54 16.54 1.632 4 1 1 0 896.1495 2606.4628 S123s TMT10 115 (R) SQMALTGIsPPLAQSPPEVPK (Q) S(0.0)QMALT(0.0)GIS(0.99)PPLAQS(0.0)PPEVPK K:TMT10,s:Phosphorylated S SMARCAL1 106506.6 2 2 1258.1 161.3 HUMAN 1 -0.6721 13.8842 QMEKDHNSEDEDEDK-p O95391;S235-p QMEKDHNSEDEDEDK 0.34217424614225 0.00554351977683076 -0.175333333333333 0.546666666666667 8.65231943536968 32.701537128906 -0.175333333333333 0.546666666666667 0.136385454861644 0.000536841754575104 -1.7481783218141 7.28514610281176 O95391 SLU7 O95391.S235.p_SLU7 O95391_S235s _1_1_235_235 O95391 O95391 Pre-mRNA-splicing factor SLU7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17941.17941.3 22.04 22.04 7.004 3 1 1 0 1266.2184 3716.6749 S235s TMT10 232 (K) DHNsEDEDEDKYADDIDMPGQNFDSK (R) DHNS(0.99)EDEDEDKY(0.0)ADDIDMPGQNFDS(0.0)K K:TMT10,s:Phosphorylated S SLU7 68841.9 3 4 1408.1 145.68 HUMAN 1 -8.6523 32.7015 QMEPKVVTDTDETEL-p P05198;T279-p QMEPKVVTDTDETEL 0.309431488058317 0.339454480287381 0.286333333333333 0.329 9.52607230076424 6.21528126867923 0.286333333333333 0.329 0.111530274199448 0.239040711679336 1.89947707503156 1.32249967328773 P05198 EIF2S1 P05198.T279.p_EIF2S1 P05198_T279t _1_1_279_279 P05198 P05198 Eukaryotic translation initiation factor 2 subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14026.14026.2 14.11 14.11 2.534 3 1 1 0 829.3974 1577.822 T279t TMT10 277 (K) VVtDTDETELAR (Q) VVT(0.99)DT(0.0)DET(0.0)ELAR t:Phosphorylated T EIF2S1 36396.8 1 5 2415.1 84.49 HUMAN 1 9.5261 6.2153 QMESDNCSGGDDDWT-p Q13501;S332-p QMESDNCSGGDDDWT 0.238667138359196 0.023905004896513 -0.180333333333333 -0.347 11.902175824032 22.1069655539908 -0.180333333333333 -0.347 0.0645330835992865 0.00615606851303103 -2.31499525390901 -4.34181240777226 Q13501 SQSTM1 Q13501.S332.p_SQSTM1 Q13501_S332s _1_1_332_332 Q13501 Q13501|Q13501-2 Sequestosome-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19657.19657.5 29.2 29.2 4.756 6 1 1 0 804.3575 3937.7857 S332s TMT10 314 (K) IALESEGRPEEQMESDNCsGGDDDWTHLSSK (E) IALES(0.0)EGRPEEQMES(0.0)DNCS(0.99)GGDDDWT(0.0)HLS(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SQSTM1 48485.1 6 13 541.1 276.49 HUMAN 1 -11.9022 -22.107 QMFPNLATAANYWAK-p P0CF75;T303-p QMFPNLATAANYWAK 0.922345826324192 0.0450881171308284 -0.0143333333333333 0.313333333333333 0.688457255617707 18.0117027556342 -0.0143333333333333 0.313333333333333 0.853403214621631 0.0158062819458812 -0.19379548927114 3.46179768007415 P0CF75 EBLN1 P0CF75.T303.p_EBLN1 P0CF75_T303tY307y_2_2_303_307 P0CF75 P0CF75 Endogenous Bornavirus-like nucleoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28540.28540.4 7.3 0.58 1.327 3 2 2 0 811.8987 3083.6905 N300n T303t Y307y TMT10 287 (R) HPVIGVLSPQMFPnLAtAANyWAK (R) HPVIGVLS(0.0)PQMFPN(0.99)LAT(0.99)AAN(0.0)Y(0.99)WAK K:TMT10,n:Deamidated,t:Phosphorylated T,y:Phosphorylated Y EBLN1 40655 1 1 7206.1 7.3 HUMAN 1 -0.6885 18.0117 QMFSDAGSGDDALDG-p Q8NBZ0;S227-p QMFSDAGSGDDALDG 0.908443303300714 0.389930345046671 -0.0173333333333333 0.082 0.820083128869939 5.43964646295308 -0.0173333333333334 0.082 0.827926316115689 0.285782317475422 -0.228118642099401 1.18379288573154 Q8NBZ0 INO80E Q8NBZ0.S227.p_INO80E Q8NBZ0_S227s _1_1_227_227 Q8NBZ0 Q8NBZ0|H3BNM4|J3KNE2 INO80 complex subunit E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.36334.36746.3 15.35 15.35 3.535 2 1 1 0 973.7482 2839.2665 S227s TMT10 220 (R) QMFSDAGsGDDALDGDDDLVIDIPE (-) QMFS(0.0)DAGS(0.99)GDDALDGDDDLVIDIPE s:Phosphorylated S INO80E 26591.7 3 5 2287.1 89.59 HUMAN 1 -0.8201 5.4396 QMGKRWQSPVTKSGR-p A9Z1X7;S547-p QMGKRWQSPVTKSGR 0.274349481664046 0.0335869682552795 -0.175333333333333 0.278 10.6309768517576 19.8644968828926 -0.175333333333333 0.278 0.0864773384779073 0.0103169259100345 -2.0915783082181 3.84636199104223 A9Z1X7 NotFound A9Z1X7.S547.p_NotFound A9Z1X7_S547s _1_1_547_547 A9Z1X7 A9Z1X7 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10287.10635.3 10.86 5.89 2.409 2 1 1 0 513.953 1459.8786 S547s TMT10 544 (K) RWQsPVTK (S) RWQS(0.99)PVT(0.0)K K:TMT10,s:Phosphorylated S SRRM1 103445.7 9 20 8.1 1346.57 HUMAN 1 -10.631 19.8645 QMIVKRFSFSQRSRD-p Q92614;S140-p QMIVKRFSFSQRSRD 0.253012223939913 0.334607293916619 -0.276666666666667 -0.141 11.3817036392265 6.30116177768622 -0.276666666666667 -0.141 0.0727494368935086 0.234360179641962 -2.22312087971295 -1.33770739781993 Q92614 MYO18A Q92614.S140.p_MYO18A Q92614_S140s _1_1_140_140 Q92614 Q92614|Q92614-4|A0A0D9SFK2|Q92614-3 Unconventional myosin-XVIIIa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10255.10255.3 8.57 8.57 8.568 2 1 1 0 412.874 1156.6425 S140s TMT10 138 (K) RFsFSQR (S) RFS(0.99)FS(0.0)QR s:Phosphorylated S MYO18A 234309.1 1 2 783.1 225.59 HUMAN 1 -11.3817 -6.3012 QMKAKQLSAQSYGVT-p P49790-3;S297-p QMKAKQLSAQSYGVT 0.373228695696441 0.207886205489779 0.159333333333333 -0.184666666666667 7.93770728686322 8.97398614414737 0.159333333333333 -0.184666666666667 0.160778980811443 0.126648889348907 1.62435259174822 -1.80321301619006 P49790 NUP153 P49790.3.S297.p_NUP153 P49790-3_S297s _1_1_297_297 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11558.11558.2 15.69 10.17 3.367 7 1 1 0 932.9528 1784.934 S297s TMT10 295 (K) QLsAQSYGVTSSTAR (R) QLS(0.99)AQS(0.0)Y(0.0)GVT(0.0)S(0.0)S(0.0)T(0.0)AR s:Phosphorylated S NUP153 158989.2 2 11 64.1 696.53 HUMAN 1 7.9377 -8.974 QMKEGEETEGSEEDD-p P49321-3;T479-p QMKEGEETEGSEEDD 0.358796058640274 0.0087641603005346 -0.146 0.686333333333333 8.27142880087941 29.1688730130394 -0.146 0.686333333333333 0.148887116809994 0.00121091232251758 -1.68221642335486 6.17375260233089 P49321 NASP P49321.3.T479.p_NASP P49321-3_T479tS482s_2_2_479_482 P49321-3 P49321-3|P49321-4 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17652.17652.4 12.8 12.8 5.292 4 2 2 0 1126.5138 4343.065 T479t S482s TMT10 475 (K) EGEEtEGsEEDDKENDKTEEMPNDSVLENK (S) EGEET(0.99)EGS(0.99)EEDDKENDKT(0.0)EEMPNDS(0.0)VLENK K:TMT10,t:Phosphorylated T,s:Phosphorylated S NASP 86552 2 30 87.1 626.46 HUMAN 1 -8.2714 29.1689 QMLRMLLSPGGVSQP-p Q6PK04;S233-p QMLRMLLSPGGVSQP 0.386150789195061 0.116664702961482 0.134666666666667 -0.248333333333333 7.65027160772608 12.306879385918 0.134666666666667 -0.248333333333333 0.171780095254354 0.0587911643497682 1.57442657274354 -2.38566136203286 Q6PK04 CCDC137 Q6PK04.S233.p_CCDC137 Q6PK04_S233s _1_1_233_233 Q6PK04 Q6PK04 Coiled-coil domain-containing protein 137 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29669.29669.3 17.16 15.77 2.977 4 1 1 0 703.0449 2027.1521 S233s TMT10 230 (R) MLLsPGGVSQPLTASLAR (Q) MLLS(0.99)PGGVS(0.0)QPLT(0.0)AS(0.0)LAR s:Phosphorylated S CCDC137 33287.8 2 2 3943.1 40.42 HUMAN 1 7.6503 -12.3069 QMMNSSISSGSGSLR-p Q12959-2;S570-p QMMNSSISSGSGSLR 0.620926888590319 0.698028161680311 0.0816666666666667 -0.0393333333333333 3.84788794557347 2.14602098849935 0.0816666666666667 -0.0393333333333333 0.412297978485846 0.610095611619705 0.887939275403934 -0.540837468218437 Q12959 DLG1 Q12959.2.S570.p_DLG1 Q12959-2_S570sS571s_2_2_570_571 Q12959-2 A0A0C4DFT3|Q12959-6|Q12959-3|Q12959-5|Q12959-9|Q12959-8|E7EQD7|Q12959-2|Q12959-7|Q12959-4 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16591.16591.4 8.03 8.03 1.544 6 2 2 0 674.3018 2534.2653 S570s S571s TMT10 557 (K) IHDLREQMMNSSIssGSGSLR (T) IHDLREQMMNS(0.0)S(0.0)IS(0.99)S(0.99)GS(0.0)GS(0.0)LR s:Phosphorylated S DLG1 103604.4 12 29 196.1 460.79 HUMAN 1 3.8479 -2.146 QMNYIQVTPQEKEAI-p P54725-3;T316-p QMNYIQVTPQEKEAI 0.623773349195936 0.701177435799001 -0.122333333333333 0.0446666666666667 3.80878869586949 2.11911037068218 -0.122333333333333 0.0446666666666667 0.416026629583683 0.61388774394925 -0.880398289047757 0.5349577465975 P54725 RAD23A P54725.3.T316.p_RAD23A P54725-3_T316t_1_1_316_316 P54725-3 P54725|P54725-3 Isoform 3 of UV excision repair protein RAD23 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.34782.34782.5 15.47 15.47 1.902 3 1 1 0 1130.3428 5566.7398 N311n T316t TMT10 275 (R) HQEQFIQMLNEPPGELADISDVEGEVGAIGEEAPQMnYIQVtPQEK (E) HQEQFIQMLN(0.0)EPPGELADIS(0.0)DVEGEVGAIGEEAPQMN(0.99)Y(0.0)IQVT(0.99)PQEK K:TMT10,n:Deamidated,t:Phosphorylated T RAD23A 39594.5 1 6 1987.1 103.93 HUMAN 1 -3.8088 2.1191 QMPLKRFSMEGISNI-p Q99689;S316-p QMPLKRFSMEGISNI 0.829805750708961 0.456087929607416 -0.0563333333333333 0.0946666666666667 1.55946418476462 4.54609301910002 -0.0563333333333333 0.0946666666666667 0.698318554524718 0.351067557785125 -0.408870389597824 1.01998837282639 Q99689 FEZ1 Q99689.S316.p_FEZ1 Q99689_S316s _1_1_316_316 Q99689 Q99689 Fasciculation and elongation protein zeta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28522.28522.3 12.82 12.82 4.646 3 1 1 0 706.3646 2037.1113 S316s TMT10 314 (K) RFsMEGISNILQSGIR (Q) RFS(0.99)MEGIS(0.0)NILQS(0.0)GIR s:Phosphorylated S FEZ1 45403.2 3 2 4925.1 25.01 HUMAN 1 -1.5595 4.5461 QMQEFRASFNHFDKD-p O43707;S773-p QMQEFRASFNHFDKD 0.0745793811074775 0.245869836570552 -0.376666666666667 -0.171333333333333 24.193235928202 8.02961173633933 -0.376666666666667 -0.171333333333333 0.00380781996999898 0.157412358641698 -4.84230758211716 -1.63977530953767 O43707 ACTN4 O43707.S773.p_ACTN4 O43707_S773s _1_1_773_773 O43707 O43707|O43707-2|O43707-3|F5GXS2 Alpha-actinin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19460.19460.4 15.55 11.72 6.08 2 1 1 0 710.0922 2757.3819 S773s TMT10 761 (K) GISQEQMQEFRAsFNHFDK (D) GIS(0.0)QEQMQEFRAS(0.99)FNHFDK K:TMT10,s:Phosphorylated S ACTN4 105308.6 2 8 1097.1 178.17 HUMAN 1 -24.1932 -8.0296 QMRRAASSDQLRDNS-p A0A1B0GTW1;S1038-p QMRRAASSDQLRDNS 0.934031453108508 0.0896284319752832 -0.0123333333333333 -0.188666666666667 0.583617233621641 13.8634482664321 -0.0123333333333333 -0.188666666666667 0.874255305685036 0.0410823400797274 -0.165903660649779 -2.66630086977083 A0A1B0GTW1 NotFound A0A1B0GTW1.S1038.p_NotFound A0A1B0GTW1_S1037sS1038s_2_2_1037_1038 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16284.16284.3 9.16 6.08 7.134 3 2 2 0 1066.205 3036.6721 S1037s S1038s TMT10 1035 (R) AAssDQLRDNSPPPAFKPEPPK (A) AAS(0.99)S(0.99)DQLRDNS(0.0)PPPAFKPEPPK K:TMT10,s:Phosphorylated S TJP2 141123.7 23 35 41.1 827.72 HUMAN 1 -0.5836 -13.8634 QMSRSEVTDLRRTLQ-p P08727;T297-p QMSRSEVTDLRRTLQ 0.107015162488299 0.0966849216025479 0.445333333333333 0.22 20.4298596622093 13.4165575192079 0.445333333333333 0.22 0.00905761869187625 0.0455348854185943 3.97181623049161 2.58493336600595 P08727 KRT19 P08727.T297.p_KRT19 P08727_T297t _1_1_297_297 P08727 P08727 Keratin, type I cytoskeletal 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10563.10563.4 9.56 9.56 1.292 4 1 1 0 688.5923 2671.3783 T297t TMT10 281 (R) EVAGHTEQLQMSRSEVtDLRR (T) EVAGHT(0.0)EQLQMS(0.0)RS(0.0)EVT(0.99)DLRR t:Phosphorylated T KRT19 44105.2 1 17 383.1 334.07 HUMAN 1 20.4299 13.4166 QMTARDNSPDSTPNH-p Q6UB98-2;S126-p QMTARDNSPDSTPNH 0.104209357384164 0.0208656908576448 0.316 0.472 20.7091615956884 22.9847437556249 0.316 0.472 0.00849344424919899 0.00502950940311617 4.03282415565242 4.54573496674791 Q6UB98 ANKRD12 Q6UB98.2.S126.p_ANKRD12 Q6UB98-2_S126s _1_1_126_126 Q6UB98-2 Q6UB98|Q6UB98-2 Isoform 2 of Ankyrin repeat domain-containing protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5366.5366.4 18.54 18.54 2.134 6 1 1 0 730.1203 2837.4997 S126s TMT10 124 (R) DNsPDSTPNHPSQTTPAQKK (T) DNS(0.99)PDS(0.0)T(0.0)PNHPS(0.0)QT(0.0)T(0.0)PAQKK K:TMT10,s:Phosphorylated S ANKRD12 234548.2 2 2 480.1 298.87 HUMAN 1 20.7092 22.9847 QMTDVYYSPTSVRNP-p Q9ULI3;S1332-p QMTDVYYSPTSVRNP 0.18878716220005 0.595641919853136 -0.300333333333333 -0.0683333333333333 14.1794970333972 3.04678977936472 -0.300333333333333 -0.0683333333333334 0.0381988507261387 0.49581655337039 -2.72593435539708 -0.729796560777503 Q9ULI3 HEG1 Q9ULI3.S1332.p_HEG1 Q9ULI3_S1332s _1_1_1332_1332 Q9ULI3 Q9ULI3 Protein HEG homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25738.25738.4 17.11 17.11 1.811 6 1 1 0 734.3631 2854.4607 S1332s TMT10 1322 (K) NLLQMTDVYYsPTSVRNPELER (N) NLLQMT(0.0)DVY(0.0)Y(0.0)S(0.99)PT(0.0)S(0.0)VRNPELER s:Phosphorylated S HEG1 149112.5 1 3 4059.1 38.45 HUMAN 1 -14.1795 -3.0468 QNAARNNSPPTVGAF-p Q86XL3;S662-p QNAARNNSPPTVGAF 0.330275298399303 0.18170030757846 0.162 -0.221666666666667 8.9928588875327 9.74353319720236 0.162 -0.221666666666667 0.126099716808479 0.106083216738866 1.80712664592731 -1.93642531146255 Q86XL3 ANKLE2 Q86XL3.S662.p_ANKLE2 Q86XL3_S662s _1_1_662_662 Q86XL3 Q86XL3|Q86XL3-3 Ankyrin repeat and LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9480.9902.3 16.1 16.1 2.263 3 1 1 0 588.6199 1683.8764 S662s TMT10 660 (R) NNsPPTVGAFGHTR (C) NNS(0.99)PPT(0.0)VGAFGHT(0.0)R s:Phosphorylated S ANKLE2 104968.3 5 7 897.1 204.02 HUMAN 1 8.9929 -9.7435 QNAEGRRSPSPYSLK-p Q9ULD4;S17-p QNAEGRRSPSPYSLK 0.81888464545651 0.198008576778493 -0.034 0.199333333333333 1.67203418189965 9.25327441749591 -0.034 0.199333333333333 0.680450569369461 0.118760647905932 -0.434881168277431 1.85152847760059 Q9ULD4 BRPF3 Q9ULD4.S17.p_BRPF3 Q9ULD4_S17sS19s_2_2_17_19 Q9ULD4 Q9ULD4|E9PI60|Q9ULD4-2 Bromodomain and PHD finger-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14518.14518.2 8.65 8.65 8.653 4 2 2 0 634.2838 1107.6247 S17s S19s Hydrogen 17 (R) sPsPYSLK (C) S(0.99)PS(0.99)PY(0.0)S(0.0)LK K:TMT10-Lys-Only,s:Phosphorylated S BRPF3 137397.1 5 5 1814.1 113.02 HUMAN 1 -1.672 9.2533 QNAIRQRSLGPSLAT-p Q9H3N1;S270-p QNAIRQRSLGPSLAT 0.594811993936193 0.0699911058958282 -0.0813333333333333 -0.240666666666667 4.1619059045344 15.3571691593017 -0.0813333333333333 -0.240666666666667 0.383538892228497 0.0291261501519698 -0.947954277055341 -2.94373356714858 Q9H3N1 TMX1 Q9H3N1.S270.p_TMX1 Q9H3N1_S270s_1_1_270_270 Q9H3N1 Q9H3N1 Thioredoxin-related transmembrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13947.13947.2 16.17 16.17 4.937 4 1 1 0 826.4169 1588.8856 Q268q S270s Hydrogen 268 (R) qRsLGPSLATDKS (-) Q(1.0)RS(0.99)LGPS(0.0)LAT(0.0)DKS(0.0) K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S TMX1 32190 6 3 695.1 242.17 HUMAN 1 -4.1619 -15.3572 QNAPRDESRGRSSFY-p Q9NYF8;S315-p QNAPRDESRGRSSFY 0.30062605052911 0.337398628791268 0.187333333333333 0.123333333333333 9.8054120344292 6.25117040676052 0.187333333333333 0.123333333333333 0.104582446375272 0.237073471576502 1.94792286650244 1.32885809135832 Q9NYF8 BCLAF1 Q9NYF8.S315.p_BCLAF1 Q9NYF8_S315s _1_1_315_315 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|Q9NYF8-4|A0A1W2PQ43|E9PJA7 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5389.5389.3 12.11 12.11 12.106 2 1 1 0 588.6264 1683.8976 S315s TMT10 304 (K) TIAPQNAPRDEsR (G) T(0.0)IAPQNAPRDES(0.99)R s:Phosphorylated S BCLAF1 106234.3 4 13 10.1 1293.04 HUMAN 1 9.8054 6.2512 QNAQDRNSKGSDSLN-p E7EVA0;S1663-p QNAQDRNSKGSDSLN 0.962071129402723 0.00555856590991147 -0.00933333333333333 -0.511 0.323943650082995 32.6841701677658 -0.00933333333333334 -0.511 0.928123213385183 0.000538992824091461 -0.0944861007769528 -7.27930520421459 E7EVA0 NotFound E7EVA0.S1663.p_NotFound E7EVA0_S1663s _1_1_1663_1663 E7EVA0 E7EVA0|P27816-4 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12714.12714.3 7.66 7.66 1.14 2 1 1 0 784.0364 2270.1236 S1663s TMT10 1650 (K) LSFCEDQNAQDRNsK (G) LS(0.0)FCEDQNAQDRNS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP4 246695.2 1 25 38.1 865.62 HUMAN 1 -0.3239 -32.6842 QNCEDEDSDEDDELD-p Q9NRL3-3;S276-p QNCEDEDSDEDDELD 0.855349885811891 0.84342475725858 0.0256666666666667 0.02 1.31920201223421 1.03852133968621 0.0264636255266054 0.02 0.738039827672574 0.787313804040826 0.352135564108623 0.283485313132349 Q9NRL3 STRN4 Q9NRL3.3.S276.p_STRN4 Q9NRL3-3_S276s _1_1_276_276 Q9NRL3-3 Q9NRL3-3|F5GYK2|Q9NRL3-2 Isoform 3 of Striatin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.29788.29788.5 24.21 24.21 8.981 3 1 1 0 897.6378 4404.1756 S276s TMT10 257 (R) LGGSVLGQIPFLQNCEDEDsDEDDELDSVQHKK (Q) LGGS(0.0)VLGQIPFLQNCEDEDS(0.99)DEDDELDS(0.0)VQHKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S STRN4 82006 19 11 1137.1 173.35 HUMAN 1 1.3192 1.0385 QNCSLEDSQIEKERD-p P31930;S159-p QNCSLEDSQIEKERD 0.656250820343572 0.0610999358357444 -0.0703333333333333 0.243333333333333 3.43245849892517 16.1692237273937 -0.0703333333333334 0.243333333333333 0.45368471742627 0.0241589262065048 -0.80696032728752 3.0985326229958 P31930 UQCRC1 P31930.S159.p_UQCRC1 P31930_S159s _1_1_159_159 P31930 P31930 Cytochrome b-c1 complex subunit 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30954.30954.4 17.57 17.57 1.149 2 1 1 0 945.7449 3699.9991 S159s TMT10 143 (K) AVELLGDIVQNCSLEDsQIEKERDVILR (E) AVELLGDIVQNCS(0.0)LEDS(0.99)QIEKERDVILR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UQCRC1 53329.5 7 1 2464.1 82.19 HUMAN 1 -3.4325 16.1692 QNDDHSDTDSEENRD-p Q86W56;T199-p QNDDHSDTDSEENRD 0.755009081690247 0.620652804314526 -0.0686666666666667 -0.092 2.33301446959794 2.81783766671585 -0.0686666666666667 -0.092 0.584384317931104 0.522656352545026 -0.58134967769985 -0.683071240080896 Q86W56 BPHL Q86W56.T199.p_BPHL Q86W56_S197sT199t_2_2_197_199 Q86W56 Q86W56|Q86W56-2|Q86W56-3 Poly(ADP-ribose) glycohydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14969.14969.4 17.71 17.71 2.862 6 2 2 0 910.3991 3478.6359 S197s T199t TMT10 190 (R) SPQNDDHsDtDSEENRDNQQFLTTVK (L) S(0.0)PQNDDHS(0.99)DT(0.99)DS(0.0)EENRDNQQFLT(0.0)T(0.0)VK K:TMT10,s:Phosphorylated S,t:Phosphorylated T PARG 112534.8 2 12 855.1 211.13 HUMAN 1 -2.333 -2.8178 QNDGSFISKKEWYV_-p Q15223;S511-p QNDGSFISKKEWYV_ 0.645199971539937 0.683621680040398 0.0883333333333333 -0.069 3.56198768203856 2.26106185609164 0.0883333333333333 -0.069 0.440353276181676 0.594146871112558 0.832418986433926 -0.565801177862081 Q15223 PVRL1 Q15223.S511.p_PVRL1 Q15223_S511s _1_1_511_511 Q15223 Q15223 Nectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31261.31261.4 11.12 11.12 1.156 6 1 1 0 925.9362 3620.7831 S511s TMT10 485 (R) TLGYQYDPEQLDLAENMVSQNDGSFIsK (K) T(0.0)LGY(0.0)QY(0.0)DPEQLDLAENMVS(0.0)QNDGS(0.0)FIS(0.99)K K:TMT10,s:Phosphorylated S NECTIN1 57499.4 1 6 885.1 206.68 HUMAN 1 3.562 -2.2611 QNEEEELSPPLMEYN-p Q86Y13;S612-p QNEEEELSPPLMEYN 0.911753399332893 0.164054324598271 0.018 0.188333333333333 0.782032233964961 10.3220910583569 0.018 0.188333333333333 0.83521209832453 0.0928519212009025 0.218272851662972 2.03687469149302 Q86Y13 DZIP3 Q86Y13.S612.p_DZIP3 Q86Y13_S612s _1_1_612_612 Q86Y13 Q86Y13 E3 ubiquitin-protein ligase DZIP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.33100.33100.4 18.36 16.65 5.561 2 1 1 0 885.9437 3460.7809 S612s TMT10 599 (R) IEIEELQNEEEELsPPLMEYNINVK (S) IEIEELQNEEEELS(0.99)PPLMEY(0.0)NINVK K:TMT10,s:Phosphorylated S DZIP3 140142.2 2 2 2887.1 66.9 HUMAN 1 0.782 10.3221 QNERNRDSGYLHLLY-p P35658-3;S793-p QNERNRDSGYLHLLY 0.358638238095362 0.0792019635647639 -0.193333333333333 -0.228 8.27438164735269 14.6155559335393 -0.193333333333333 -0.228 0.148785920181873 0.0345497100206357 -1.68272805115003 -2.80488147801758 P35658 NUP214 P35658.3.S793.p_NUP214 P35658-3_S793s _1_1_793_793 P35658-3 P35658-5|P35658-3|P35658-4|P35658-2|A0A0A0MSW3 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19110.19110.4 12.49 12.49 3.93 3 1 1 0 505.0234 1937.1009 S793s TMT10 790 (R) NRDsGYLHLLYK (R) NRDS(0.99)GY(0.0)LHLLY(0.0)K K:TMT10,s:Phosphorylated S NUP214 214428.5 2 14 111.1 572.27 HUMAN 1 -8.2744 -14.6156 QNFIDETSDIENLLK-p Q14692;S639-p QNFIDETSDIENLLK 0.576214180707572 0.726507044659559 -0.0783333333333333 -0.0396666666666667 4.40395750324443 1.9091989545825 -0.0783333333333333 -0.0396666666666667 0.36274735102883 0.644288091899335 -0.993600870114662 -0.488542472580049 Q14692 BMS1 Q14692.S639.p_BMS1 Q14692_S639s _1_1_639_639 Q14692 Q14692 Ribosome biogenesis protein BMS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.33013.33655.5 24.14 25.68 1.384 4 1 1 0 931.2653 4572.3287 S639s TMT10 629 (K) LGPQNFIDETsDIENLLKEEEDYKEENNDSK (E) LGPQNFIDET(0.0)S(0.99)DIENLLKEEEDY(0.0)KEENNDS(0.0)K K:TMT10,s:Phosphorylated S BMS1 146660.4 19 5 1331.1 153.07 HUMAN 1 -4.404 -1.9092 QNGDILNSSTEEKFK-p Q96RT1-8;S714-p QNGDILNSSTEEKFK 0.998180995519267 0.791291013552951 0.000333333333333324 -0.0263333333333333 0.0147724903174051 1.41499479949432 0.000333333333333326 -0.0263333333333333 0.996604286919706 0.721939027430245 0.00445602131808339 -0.374924159973237 Q96RT1 ERBB2IP Q96RT1.8.S714.p_ERBB2IP Q96RT1-8_S714s _1_1_714_714 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5|Q96RT1-4|Q96RT1-6|Q96RT1-7 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23917.23917.4 14.72 15.63 1.16 4 1 1 0 858.6743 3351.7069 S714s TMT10 695 (K) IRQEDENFNSLLQNGDILNsSTEEK (F) IRQEDENFNS(0.0)LLQNGDILNS(0.99)S(0.0)T(0.0)EEK K:TMT10,s:Phosphorylated S ERBIN 159762.8 13 8 81.1 633.5 HUMAN 1 0.0148 -1.415 QNGKNERSHMPGTRF-p Q9UHY8-2;S296-p QNGKNERSHMPGTRF 0.24047106331053 0.303622289668899 -0.391333333333333 0.103333333333333 11.8295567924823 6.8358468051228 -0.391333333333333 0.103333333333333 0.0656212230854883 0.207212198937961 -2.30213873292631 1.43186102080912 Q9UHY8 FEZ2 Q9UHY8.2.S296.p_FEZ2 Q9UHY8-2_S296s_1_1_296_296 Q9UHY8-2 Q9UHY8-2 Isoform 2 of Fasciculation and elongation protein zeta-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24813.24813.3 8.74 1.04 2.001 6 1 1 0 1463.0428 4302.2348 N285n N290n N293n S296s N310n N314n Hydrogen 283 (K) LKnGSSQnGKnERsHMPGTRFSMEGISnVIQnGLR (H) LKN(1.0)GS(0.0)S(0.0)QN(1.0)GKN(1.0)ERS(0.99)HMPGT(0.0)RFS(0.0)MEGIS(0.0)N(1.0)VIQN(1.0)GLR K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S FEZ2 42897 1 4 3458.1 50.41 HUMAN 1 -11.8296 6.8358 QNGNLHESDSESVPR-p Q86UP2;S75-p QNGNLHESDSESVPR 0.417922523511391 0.739438597226566 0.11 0.0403333333333334 6.99222944890512 1.80851943576483 0.11 0.0403333333333334 0.199883550484351 0.659398654183314 1.45965294998744 0.465914722255336 Q86UP2 KTN1 Q86UP2.S75.p_KTN1 Q86UP2_S75s _1_1_75_75 Q86UP2 Q86UP2|Q86UP2-4|Q86UP2-3|Q86UP2-2 Kinectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8879.8879.3 22.38 22.38 2.643 3 1 1 0 740.6754 2140.0468 S75s TMT10 66 (K) EIQNGNLHEsDSESVPR (D) EIQNGNLHES(0.99)DS(0.0)ES(0.0)VPR s:Phosphorylated S KTN1 156557.7 57 1 186.1 473.59 HUMAN 1 6.9922 1.8085 QNGSFGPSPVSGGEC-p Q5JRA6;S1670-p QNGSFGPSPVSGGEC 0.448756694658551 0.904167309572023 0.104 0.0123333333333334 6.42561559088189 0.610065409153153 0.104 0.0123333333333334 0.227739540947723 0.868947341959579 1.36004612535065 0.172971909235198 Q5JRA6 MIA3 Q5JRA6.S1670.p_MIA3 Q5JRA6_S1670sS1678s_2_2_1670_1678 Q5JRA6 Q5JRA6|Q5JRA6-2|Q5JRA6-4 Transport and Golgi organization protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22831.22831.5 15.83 15.83 1.161 8 2 2 0 913.0547 4400.3095 N1664n S1670s S1678s TMT10 1658 (R) RGPLSQnGSFGPsPVSGGECsPPLTVEPPVRPLSATLNRR (D) RGPLS(0.0)QN(0.99)GS(0.0)FGPS(0.99)PVS(0.0)GGECS(0.99)PPLT(0.0)VEPPVRPLS(0.0)AT(0.0)LN(0.0)RR C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S MIA3 214383.2 11 14 378.1 336.1 HUMAN 2 6.4256 0.6101 QNHHEVSTEGEEEES-p Q9ULI0;T256-p QNHHEVSTEGEEEES 0.476784104106263 0.00925477031703611 0.147666666666667 0.455666666666667 5.92104534315655 28.7229190608748 0.147666666666667 0.455666666666667 0.2557970111551 0.00134186274021199 1.27048568352105 6.04373784081957 Q9ULI0 ATAD2B Q9ULI0.T256.p_ATAD2B Q9ULI0_S255sT256tS263s_3_3_255_263 Q9ULI0 Q9ULI0|Q9ULI0-2 ATPase family AAA domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17034.17034.5 21.78 21.78 4.332 6 3 3 0 1112.8472 5320.302 S255s T256t S263s TMT10 244 (R) NSYGIQNHHEVstEGEEEEsQEEDGDIEVEEAEGEENDRPYNLR (Q) NS(0.0)Y(0.0)GIQNHHEVS(0.99)T(0.99)EGEEEES(0.99)QEEDGDIEVEEAEGEENDRPY(0.0)NLR s:Phosphorylated S,t:Phosphorylated T ATAD2B 166451.5 3 17 531.1 280.81 HUMAN 1 5.921 28.7229 QNHSRSPSEERGHST-p Q9H0G5;S293-p QNHSRSPSEERGHST 0.662515509657473 0.968349549397408 -0.078 -0.0043333333333333 3.34954532851942 0.198086240487246 -0.078 -0.0043333333333333 0.462429431516707 0.955413505227589 -0.790557099893959 -0.0585425972129292 Q9H0G5 NSRP1 Q9H0G5.S293.p_NSRP1 Q9H0G5_S291sS293s_2_2_291_293 Q9H0G5 Q9H0G5|A0A024QZ33 Nuclear speckle splicing regulatory protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.2204.2204.4 9.74 9.74 1.118 6 2 2 0 586.0057 2181.0707 S291s S293s TMT10 285 (R) SQNHSRsPsEERGHSTR (H) S(0.0)QNHS(0.0)RS(0.99)PS(0.99)EERGHS(0.0)T(0.0)R s:Phosphorylated S NSRP1 66617.1 6 7 900.1 203.68 HUMAN 1 -3.3495 -0.1981 QNINLAMSPLPTAET-p Q16665-3;S475-p QNINLAMSPLPTAET 0.0617660610365025 0.0402491024580841 -0.428666666666667 -0.257333333333333 26.3339142985414 18.7093956915354 -0.428666666666667 -0.257333333333333 0.0023259938930607 0.0134604763974016 -5.38974477177021 -3.60418513092964 Q16665 HIF1A Q16665.3.S475.p_HIF1A Q16665-3_S475s _1_1_475_475 Q16665-3 Q16665-3|A8MYV6 Isoform 3 of Hypoxia-inducible factor 1-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26358.26358.4 12.08 8.39 11.139 3 1 1 0 711.3997 2762.6003 S475s TMT10 467 (K) LQNINLAMsPLPTAETPKPLR (S) LQNINLAMS(0.99)PLPT(0.0)AET(0.0)PKPLR K:TMT10,s:Phosphorylated S HIF1A 96545 2 1 5683.1 17.19 HUMAN 1 -26.3339 -18.7094 QNINRRNSPYSQTMK-p Q6N021;S817-p QNINRRNSPYSQTMK 0.578846851201194 0.951355590623355 0.079 -0.00833333333333332 4.36720757334907 0.309739706595439 0.079 -0.00833333333333333 0.365829937340393 0.931163682877801 0.986702511233689 -0.0904676871605026 Q6N021 TET2 Q6N021.S817.p_TET2 Q6N021_S817s _1_1_817_817 Q6N021 E7EQS8|Q6N021|Q6N021-3|E7EPB1|Q6N021-2 Methylcytosine dioxygenase TET2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6323.6323.3 9.87 9.87 2.507 4 1 1 0 583.9634 1669.9096 S817s TMT10 815 (R) RNsPYSQTMK (S) RNS(0.99)PY(0.0)S(0.0)QT(0.0)MK K:TMT10,s:Phosphorylated S TET2 226374.6 2 10 594.1 264.06 HUMAN 1 4.3672 -0.3097 QNKFRDLSPPRYDSL-p Q96SN8;S1238-p QNKFRDLSPPRYDSL 0.662560645933152 0.187155870262834 -0.0603333333333333 -0.148333333333333 3.34645836429662 9.5737698867822 -0.0603333333333333 -0.148333333333333 0.462758243100744 0.11031206419462 -0.789944727700243 -1.90701066628965 Q96SN8 CDK5RAP2 Q96SN8.S1238.p_CDK5RAP2 Q96SN8_S1238s _1_1_1238_1238 Q96SN8 Q96SN8|Q96SN8-2|Q96SN8-3|Q96SN8-4|A0A0A0MRG9 CDK5 regulatory subunit-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15297.15297.3 17.29 15.46 5.285 4 1 1 0 637.9707 1831.9297 S1238s Hydrogen 1236 (R) DLsPPRYDSLVQSQAR (E) DLS(0.99)PPRY(0.0)DS(0.0)LVQS(0.0)QAR s:Phosphorylated S CDK5RAP2 216574.2 6 4 932.1 199.16 HUMAN 1 -3.3465 -9.5738 QNKFSPPSPLPQAVF-p Q99594;S148-p QNKFSPPSPLPQAVF 0.975009344981545 0.577442919963717 -0.00500000000000001 0.054 0.212680475095408 3.21710934992165 -0.00500000000000001 0.054 0.952208277576434 0.476748203292572 -0.062763173680675 0.764063215757699 Q99594 TEAD3 Q99594.S148.p_TEAD3 Q99594_S148s _1_1_148_148 Q99594 Q99594|A0A1X7SBS4|B5MCM0 Transcriptional enhancer factor TEF-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27016.27224.3 16.34 16.34 1.664 6 1 1 0 705.3559 2034.0858 S148s TMT10 144 (K) FSPPsPLPQAVFSTSSR (F) FS(0.0)PPS(0.99)PLPQAVFS(0.0)T(0.0)S(0.0)S(0.0)R s:Phosphorylated S TEAD3 48846.7 6 9 3010.1 63.35 HUMAN 1 -0.2127 3.2171 QNKGGNDSDELANGE-p Q5JRA6;S1431-p QNKGGNDSDELANGE 0.27927883174395 0.00733508911254513 -0.186666666666667 0.501333333333333 10.4725657033097 30.5323192191152 -0.186666666666667 0.501333333333333 0.0896898772564542 0.000884643066634308 -2.06394439154391 6.58504975250675 Q5JRA6 MIA3 Q5JRA6.S1431.p_MIA3 Q5JRA6_S1431s_1_1_1431_1431 Q5JRA6 Q5JRA6|Q5JRA6-2|Q5JRA6-4 Transport and Golgi organization protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9215.9215.3 8.47 8.47 8.473 1 1 1 0 858.0556 2491.2061 S1431s N1436n TMT10 1427 (K) GGNDsDELAnGEVGGDRNEK (M) GGN(0.0)DS(1.0)DELAN(0.99)GEVGGDRN(0.0)EK K:TMT10,s:Phosphorylated S,n:Deamidated MIA3 214383.2 1 5 378.1 336.1 HUMAN 1 -10.4726 30.5323 QNKHKRASLTLEEKQ-p A0A0U1RQQ9;S681-p QNKHKRASLTLEEKQ 0.0320113506588935 0.129930819366306 -0.741 -0.171666666666667 34.978878381369 11.6806845978268 -0.741 -0.171666666666667 0.000317769464320119 0.0679096575147294 -8.10213572128437 -2.27472200187079 A0A0U1RQQ9 NotFound A0A0U1RQQ9.S681.p_NotFound A0A0U1RQQ9_S681s _1_1_681_681 A0A0U1RQQ9 A0A0U1RQQ9|Q6P3W7 SCY1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16356.16356.2 11.83 6.17 1.881 2 1 1 0 714.8909 1348.8088 S681s TMT10 680 (R) AsLTLEEK (Q) AS(0.99)LT(0.0)LEEK K:TMT10,s:Phosphorylated S SCYL2 104795 8 3 1113.1 175.8 HUMAN 1 -34.9789 -11.6807 QNKSLSQSFENLLDE-p Q8TC07-2;S205-p QNKSLSQSFENLLDE 0.501579707468534 0.752400094712724 0.094 0.032 5.52600367315193 1.7065824334932 0.094 0.032 0.280155809476953 0.675059038741172 1.19963756528901 0.442746704004861 Q8TC07 TBC1D15 Q8TC07.2.S205.p_TBC1D15 Q8TC07-2_S205s _1_1_205_205 Q8TC07-2 Q8TC07-3|Q8TC07-2 Isoform 2 of TBC1 domain family member 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.35209.35810.3 24.2 24.2 2.324 4 1 1 0 930.8173 2710.4704 S205s TMT10 201 (K) SLSQsFENLLDEPAYGLIQK (I) S(0.0)LS(0.0)QS(0.99)FENLLDEPAY(0.0)GLIQK K:TMT10,s:Phosphorylated S TBC1D15 78306.6 14 6 1180.1 169.17 HUMAN 1 5.526 1.7066 QNLLKQYSQHGLDGK-p Q9UPT5;S283-p QNLLKQYSQHGLDGK 0.927720105964936 0.00672570621444254 0.0236666666666667 -0.502333333333333 0.645036726888809 31.193879611153 0.0236666666666667 -0.502333333333333 0.861978289201525 0.00075964737051051 0.1823053950261 -6.79241558831512 Q9UPT5 EXOC7 Q9UPT5.S283.p_EXOC7 Q9UPT5_S283s _1_1_283_283 Q9UPT5 Q9UPT5|Q9UPT5-6|A0A0A0MSB8|Q9UPT5-1 Exocyst complex component 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7658.7658.3 8.4 8.4 8.398 2 1 1 0 557.6158 1590.864 S283s TMT10 281 (K) QYsQHGLDGK (K) QY(0.0)S(0.99)QHGLDGK K:TMT10,s:Phosphorylated S EXOC7 83779.8 1 4 3488.1 49.83 HUMAN 1 0.645 -31.1939 QNLNSRRSPVPAQIA-p A0A0U1RQK7;S684-p QNLNSRRSPVPAQIA 0.6408413698686 0.698611546022269 0.0693333333333333 0.0383333333333334 3.6086706617593 2.14091701691588 0.0693333333333334 0.0383333333333334 0.435645200546909 0.61081303753619 0.84154628374826 0.539723488933676 A0A0U1RQK7 NotFound A0A0U1RQK7.S684.p_NotFound A0A0U1RQK7_S684s _1_1_684_684 A0A0U1RQK7 A0A0U1RQK7|A0A0A0MSA7|O43432-3 Eukaryotic translation initiation factor 4 gamma 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17997.17997.3 19.55 17 15.314 2 1 1 0 596.0111 1706.0526 S684s Hydrogen 683 (R) RsPVPAQIAITVPK (T) RS(0.99)PVPAQIAIT(0.0)VPK K:TMT10-Lys-Only,s:Phosphorylated S EIF4G3 196410.6 22 4 857.1 210.84 HUMAN 1 3.6087 2.1409 QNLPIQKSIDDVDSK-p Q13393;S540-p QNLPIQKSIDDVDSK 0.164995390141944 0.0549350907862547 -0.284666666666667 0.274 15.6683097109413 16.7922750220638 -0.284666666666667 0.274 0.0271124665308978 0.0209301575657814 -3.00475823946069 3.21941701038923 Q13393 PLD1 Q13393.S540.p_PLD1 Q13393_S540s _1_1_540_540 Q13393 Q13393|Q13393-2|Q13393-4 Phospholipase D1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12219.12219.2 10.94 10.94 10.939 2 1 1 0 708.8556 1336.736 S540s TMT10 540 (K) sIDDVDSK (L) S(0.99)IDDVDS(0.0)K K:TMT10,s:Phosphorylated S PLD1 124866.5 2 12 2678.1 74.24 HUMAN 1 -15.6683 16.7923 QNLRTVGTPIASVPG-p A0A087WW66;T273-p QNLRTVGTPIASVPG 0.217590840006882 0.062528781066706 0.242333333333333 -0.223333333333333 12.7584498909741 16.0252023996617 0.242333333333333 -0.223333333333333 0.0529852528179209 0.0249735199923916 2.46763062869646 -3.07085681107079 A0A087WW66 NotFound A0A087WW66.T273.p_NotFound A0A087WW66_T273t _1_1_273_273 A0A087WW66 Q99460|A0A087WW66|Q99460-2 26S proteasome non-ATPase regulatory subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18115.18115.2 20.22 17.87 2.055 8 1 1 0 1348.2023 2615.4292 T273t TMT10 270 (R) TVGtPIASVPGSTNTGTVPGSEK (D) T(0.0)VGT(0.99)PIAS(0.0)VPGS(0.0)T(0.0)NT(0.0)GT(0.0)VPGS(0.0)EK K:TMT10,t:Phosphorylated T PSMD1 106876.4 14 2 1299.1 156.53 HUMAN 1 12.7584 -16.0252 QNLTRRISTSDILSE-p O60293;S352-p QNLTRRISTSDILSE 0.337887660812549 0.258008625496504 -0.131 0.18 8.77505890352745 7.75225860141503 -0.131 0.18 0.132584913509585 0.167793116260929 -1.76942530877349 1.59166432009969 O60293 ZFC3H1 O60293.S352.p_ZFC3H1 O60293_S352s _1_1_352_352 O60293 O60293|O60293-2 Zinc finger C3H1 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17686.17686.2 9.3 9.3 1.138 4 1 1 0 893.9896 1707.0053 S352s TMT10 350 (R) RIsTSDILSEK (K) RIS(0.99)T(0.0)S(0.0)DILS(0.0)EK K:TMT10,s:Phosphorylated S ZFC3H1 228291.3 4 8 311.1 371.67 HUMAN 1 -8.7751 7.7523 QNPDEDFS_______-p P46108;S304-p QNPDEDFS_______ 0.996516649274227 0.0107507387564347 -0.000666666666666686 0.443 0.0269636955175198 27.597915373403 -0.000666666666666691 0.443 0.993810613322753 0.00173863517861182 -0.00812209084209654 5.72516230718542 P46108 CRK P46108.S304.p_CRK P46108_S304s _1_1_304_304 P46108 P46108 Adapter molecule crk HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21690.21690.2 9.19 9.19 99 1 1 1 0 865.3751 1649.7856 S304s TMT10 293 (R) LLDQQNPDEDFs (-) LLDQQNPDEDFS(1.0) s:Phosphorylated S CRK 33887.1 1 8 1891.1 108.77 HUMAN 1 -0.027 27.5979 QNPGDSCSLGTPPGQ-p Q08334;S314-p QNPGDSCSLGTPPGQ 0.0635108641161859 0.00512747662935932 -0.516333333333333 -0.627 25.9969356150503 33.3337274656067 -0.516333333333334 -0.627 0.00251365944580673 0.000464116761781869 -5.30078256122056 -7.50047426335198 Q08334 IL10RB Q08334.S314.p_IL10RB Q08334_S314sT317t_2_2_314_317 Q08334 Q08334 Interleukin-10 receptor subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22402.22402.4 21.31 21.31 1.11 7 2 2 0 930.1752 3557.743 S314s T317t TMT10 295 (K) LSVIAEDSESGKQNPGDSCsLGtPPGQGPQS (-) LS(0.0)VIAEDS(0.0)ES(0.0)GKQNPGDS(0.0)CS(0.99)LGT(0.99)PPGQGPQS(0.0) K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T IL10RB 37564.9 1 3 3988.1 39.64 HUMAN 1 -25.9969 -33.3337 QNPKTSFSYEKLQAL-p Q9BYP7;S1395-p QNPKTSFSYEKLQAL 0.225645828512172 0.0282420268897654 0.207666666666667 -0.347333333333333 12.4103465035901 20.991228857884 0.207666666666667 -0.347333333333333 0.0574070657922952 0.00795934105029305 2.40533732017699 -4.09090973916354 Q9BYP7 WNK3 Q9BYP7.S1395.p_WNK3 Q9BYP7_S1395s _1_1_1395_1395 Q9BYP7 Q9BYP7|A0A087WYK2|Q9BYP7-2 Serine/threonine-protein kinase WNK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13606.13606.2 10.6 10.6 2.497 4 1 1 0 700.3488 1319.7247 S1395s TMT10 1392 (K) TSFsYEK (L) T(0.0)S(0.0)FS(0.99)Y(0.0)EK K:TMT10,s:Phosphorylated S WNK3 200294.9 1 1 5108.1 22.89 HUMAN 1 12.4103 -20.9912 QNQNQVRSPGAPGPL-p Q15942;S344-p QNQNQVRSPGAPGPL 0.152207539398086 0.017529032759499 -0.313333333333333 -0.379666666666667 16.4610791791614 24.2064045685514 -0.313333333333333 -0.379666666666667 0.0225887439235982 0.00379629141788808 -3.15723056229085 -4.83975869169658 Q15942 ZYX Q15942.S344.p_ZYX Q15942_S344s _1_1_344_344 Q15942 Q15942|Q15942-2 Zyxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17180.17180.2 16.16 16.16 14.58 2 1 1 0 673.8679 1266.7619 S344s Hydrogen 344 (R) sPGAPGPLTLK (E) S(0.99)PGAPGPLT(0.0)LK K:TMT10-Lys-Only,s:Phosphorylated S ZYX 62474.4 4 8 1126.1 174.71 HUMAN 1 -16.4611 -24.2064 QNQQGEDSGSDPEDT-p P18858;S911-p QNQQGEDSGSDPEDT 0.79813572883131 0.150520799459211 -0.0486666666666667 0.204666666666667 1.88656280429296 10.8177634053558 -0.0486666666666667 0.204666666666667 0.647654995337024 0.0828368659556619 -0.483531389523941 2.12327371332004 P18858 LIG1 P18858.S911.p_LIG1 P18858_S911sS913s_2_2_911_913 P18858 P18858 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12513.12513.2 13.51 13.51 2.49 5 2 2 0 1308.0053 2455.0695 S911s S913s TMT10 900 (K) QSQIQNQQGEDsGsDPEDTY (-) QS(0.0)QIQNQQGEDS(0.99)GS(0.99)DPEDT(0.0)Y(0.0) s:Phosphorylated S LIG1 102361.8 3 21 302.1 376.44 HUMAN 1 -1.8866 10.8178 QNRAKNRYGNIIAYD-p E9PGC5;Y943-p QNRAKNRYGNIIAYD 0.341280214844005 0.952285258377512 0.167 -0.00766666666666664 8.67799983859957 0.301857975717349 0.167 -0.00766666666666661 0.135581369424965 0.932855126263007 1.75262393930065 -0.0882377919418381 E9PGC5 NotFound E9PGC5.Y943.p_NotFound E9PGC5_Y943y _1_1_943_943 E9PGC5 E9PGC5|P28827-2|Q15262-4|Q5TG12 Receptor-type tyrosine-protein phosphatase kappa GG20160819_MSz_CCLE_T4D7_pY_Injection_01.9316.9316.3 16.74 16.74 2.65 3 1 1 0 629.9729 1807.9401 Y943y TMT10 941 (K) NRyGNIIAYDHSR (V) NRY(0.99)GNIIAY(0.0)DHS(0.0)R y:Phosphorylated Y PTPRK 168022.6 6 1 78.1 32.39 HUMAN 1 8.678 -0.3019 QNRSGAMSPMSWNSD-p Q13158;S194-p QNRSGAMSPMSWNSD 0.246226110077291 0.0459436662303519 0.206666666666667 0.24 11.6468774849017 17.9001178105204 0.206666666666667 0.24 0.0684403546769747 0.0162176610331618 2.26985252962792 3.43928324626908 Q13158 FADD Q13158.S194.p_FADD Q13158_S194s _1_1_194_194 Q13158 Q13158 FAS-associated death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20144.20144.2 14.25 14.25 1.249 8 1 1 0 1106.4418 2131.911 S194s TMT10 190 (R) SGAMsPMSWNSDASTSEAS (-) S(0.0)GAMS(0.99)PMS(0.0)WNS(0.0)DAS(0.0)T(0.0)S(0.0)EAS(0.0) s:Phosphorylated S FADD 23507.2 6 2 4363.1 32.74 HUMAN 1 11.6469 17.9001 QNSESPASPPVAVPH-p Q9HCJ0-2;S1355-p QNSESPASPPVAVPH 0.896873028140097 0.375197544245325 0.0293333333333333 0.0926666666666667 0.926388561779364 5.65167335205394 0.0293333333333333 0.0926666666666667 0.807906577325795 0.272165244367832 0.255310462933108 1.22197895801751 Q9HCJ0 TNRC6C Q9HCJ0.2.S1355.p_TNRC6C Q9HCJ0-2_S1355s _1_1_1355_1355 Q9HCJ0-2 A0A1B0GU24|Q9HCJ0-2 Isoform 2 of Trinucleotide repeat-containing gene 6C protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21216.21216.4 20.12 20.12 1.987 10 1 1 0 957.4557 3746.8248 S1355s TMT10 1335 (K) SSIDDSYGRYDLIQNSESPAsPPVAVPHSWSR (A) S(0.0)S(0.0)IDDS(0.0)Y(0.0)GRY(0.0)DLIQNS(0.0)ES(0.0)PAS(0.99)PPVAVPHS(0.0)WS(0.0)R s:Phosphorylated S TNRC6C 179888.3 2 6 1012.1 188.79 HUMAN 1 0.9264 5.6517 QNSKPRLSFSTKPTV-p O95069;S36-p QNSKPRLSFSTKPTV 0.605173265345025 0.408129950066517 0.122333333333333 -0.0906666666666667 4.03051908144656 5.18153054100071 0.122333333333333 -0.0906666666666667 0.395319367519129 0.303282216837477 0.92295887373821 -1.13698590887454 O95069 KCNK2 O95069.S36.p_KCNK2 O95069_S36s _1_1_36_36 O95069 O95069|O95069-3|O95069-2|O95069-4|F8WDE6|B4DGU6|Q6ZW95 Potassium channel subfamily K member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16463.16463.5 9.75 9.75 2.236 7 1 1 0 623.5551 3033.7776 S36s TMT10 26 (K) SAAQNSKPRLsFSTKPTVLASR (V) S(0.0)AAQNS(0.0)KPRLS(0.99)FS(0.0)T(0.0)KPT(0.0)VLAS(0.0)R K:TMT10,s:Phosphorylated S KCNK2 47377.1 3 1 1506.1 135.64 HUMAN 1 4.0305 -5.1815 QNSVRLNYGIPAIVK-p P14923;Y480-p QNSVRLNYGIPAIVK 0.129751256844141 0.763057248401207 -0.264666666666667 -0.032 18.3519008619044 1.6233060408112 -0.264666666666667 -0.032 0.0146153733470826 0.688128263379505 -3.53383660647902 -0.423618422257715 P14923 JUP P14923.Y480.p_JUP P14923_Y480y _1_1_480_480 P14923 P14923 Junction plakoglobin GG20160819_MSz_CCLE_T4D7_pY_Injection_01.30995.30995.3 15.2 15.2 99 1 1 1 0 542.6541 1545.9769 Y480y TMT10 478 (R) LNyGIPAIVK (L) LNY(1.0)GIPAIVK K:TMT10,y:Phosphorylated Y JUP 82485 3 1 69.1 34.54 HUMAN 1 -18.3519 -1.6233 QNTIVAGSLITKSNL-p O75400;S229-p QNTIVAGSLITKSNL 0.272925101260209 0.142331910657231 0.179666666666667 0.153 10.6822706041341 11.1586848261697 0.179666666666667 0.153 0.0854619778685765 0.0765828487613858 2.10053446215042 2.18293260850981 O75400 PRPF40A O75400.S229.p_PRPF40A O75400_S229s _1_1_229_229 O75400 O75400 Pre-mRNA-processing factor 40 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29234.29234.3 12.48 8.85 1.381 4 1 1 0 911.1435 2651.4544 S229s TMT10 214 (K) ELEDLEGYQNTIVAGsLITK (S) ELEDLEGY(0.0)QNT(0.0)IVAGS(0.99)LIT(0.0)K K:TMT10,s:Phosphorylated S PRPF40A 109088.4 1 5 718.2 237.38 HUMAN 1 10.6823 11.1587 QNTMSRGSPMMNRTS-p O75376-2;S1512-p QNTMSRGSPMMNRTS 0.407878856431238 0.154395245209893 0.116333333333333 0.172666666666667 7.18527526262008 10.6691950672436 0.116333333333333 0.172666666666667 0.191193213952143 0.0857196705588451 1.49340728949028 2.097338075949 O75376 NCOR1 O75376.2.S1512.p_NCOR1 O75376-2_S1512s _1_1_1512_1512 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8553.8553.4 11.64 11.64 2.213 6 1 1 0 631.2974 2442.2002 S1512s TMT10 1499 (R) RTPVSYQNTMSRGsPMMNR (T) RT(0.0)PVS(0.0)Y(0.0)QNT(0.0)MS(0.0)RGS(0.99)PMMNR s:Phosphorylated S NCOR1 259453.1 3 16 35.1 889.74 HUMAN 1 7.1853 10.6692 QNTRLQPTPPIPAPA-p O00512;T257-p QNTRLQPTPPIPAPA 0.491261982575074 0.0465614282837305 -0.138 0.239666666666667 5.68323578160284 17.818837997579 -0.138 0.239666666666667 0.270194448632431 0.016524038578256 -1.22792232891326 3.42292720926065 O00512 BCL9 O00512.T257.p_BCL9 O00512_T257tS278s_2_2_257_278 O00512 O00512 B-cell CLL/lymphoma 9 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19299.19299.5 16.99 16.02 99 2 2 2 0 817.845 3925.2631 T257t S278s TMT10 254 (R) LQPtPPIPAPAPKPAAPPRPLDREsPGVENK (L) LQPT(1.0)PPIPAPAPKPAAPPRPLDRES(1.0)PGVENK K:TMT10,t:Phosphorylated T,s:Phosphorylated S BCL9 149515.8 6 17 313.1 369.9 HUMAN 1 -5.6832 17.8188 QNVEVPETPKASKAL-p Q9UNF1;T42-p QNVEVPETPKASKAL 0.712778053605999 0.689749986734618 0.0506666666666667 -0.0473333333333333 2.76684252815389 2.21025841361623 0.0506666666666667 -0.0473333333333333 0.528829589538738 0.601137967547395 0.672644026237523 -0.554810733278271 Q9UNF1 MAGED2 Q9UNF1.T42.p_MAGED2 Q9UNF1_T42t _1_1_42_42 Q9UNF1 Q9UNF1|Q5H909 Melanoma-associated antigen D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.31801.31801.5 14.82 14.82 2 8 1 1 0 718.578 3508.8846 T42t TMT10 22 (K) DSSSMMQTLLTVTQNVEVPEtPKASK (A) DS(0.0)S(0.0)S(0.0)MMQT(0.0)LLT(0.0)VT(0.0)QNVEVPET(0.99)PKAS(0.0)K K:TMT10,t:Phosphorylated T MAGED2 65124.3 5 4 893.1 204.33 HUMAN 1 2.7668 -2.2103 QNVKLKNSQETIPNS-p Q9UHG0;S300-p QNVKLKNSQETIPNS 0.424122458622785 0.00474018699637445 0.116 0.571 6.86674594008506 33.9842909792253 0.116 0.571 0.205743160062601 0.000399549785709481 1.43766703878685 7.72767788034237 Q9UHG0 DCDC2 Q9UHG0.S300.p_DCDC2 Q9UHG0_S300s _1_1_300_300 Q9UHG0 Q9UHG0 Doublecortin domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17552.17552.4 15.09 9.74 1.163 3 1 1 0 793.6733 3091.6991 S300s TMT10 297 (K) LKNsQETIPNSDEGIFKAGAER (S) LKNS(0.99)QET(0.0)IPNS(0.0)DEGIFKAGAER K:TMT10,s:Phosphorylated S DCDC2 52889.9 8 3 1697.1 120.47 HUMAN 1 6.8667 33.9843 QNVKQFGTPKPCQYC-p Q5HYJ3;T69-p QNVKQFGTPKPCQYC 0.688488433908284 0.00793119069425146 -0.0616666666666667 0.618666666666667 3.04270161108235 29.9610186669046 -0.0616666666666667 0.618666666666667 0.496283502854244 0.00100901618678791 -0.729072210749942 6.41012908866643 Q5HYJ3 FAM76B Q5HYJ3.T69.p_FAM76B Q5HYJ3_T69t _1_1_69_69 Q5HYJ3 Q5HYJ3|F5GX09|Q5HYJ3-2|Q5HYJ3-3 Protein FAM76B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34900.34900.4 22.84 15.96 6.304 3 1 1 0 796.1685 3101.6883 T69t TMT10 66 (K) QFGtPKPCQYCNIIAAFIGTK (C) QFGT(0.99)PKPCQY(0.0)CNIIAAFIGT(0.0)K K:TMT10,C:Carbamidomethylation,t:Phosphorylated T FAM76B 39677.2 5 1 2297.1 89.3 HUMAN 1 -3.0427 29.961 QNVMAAASIANIVKS-p P17987;S27-p QNVMAAASIANIVKS 0.543582882762414 0.840031023692842 0.092 -0.0346666666666666 4.88702507240191 1.06483273146478 0.092 -0.0346666666666666 0.324561866875744 0.782558344723637 1.083313616967 -0.290034071423441 P17987 TCP1 P17987.S27.p_TCP1 P17987_S27s _1_1_27_27 P17987 P17987|E7ERF2|F5GZI8 T-complex protein 1 subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25834.25834.3 12.37 14.23 12.369 2 1 1 0 685.7062 1975.1411 S27s TMT10 19 (R) SQNVMAAAsIANIVK (S) S(0.0)QNVMAAAS(0.99)IANIVK K:TMT10,s:Phosphorylated S TCP1 60856 1 2 1979.1 104.48 HUMAN 1 4.887 -1.0648 QNVQLYGTPKPCQYC-p Q8TAV0-3;T101-p QNVQLYGTPKPCQYC 0.738774155064327 0.0527400541768121 -0.046 0.322 2.49518726042658 17.0476827278945 -0.046 0.322 0.562964842780169 0.0197347544573377 -0.615872150200651 3.26953214097804 Q8TAV0 FAM76A Q8TAV0.3.T101.p_FAM76A Q8TAV0-3_T101t _1_1_101_101 Q8TAV0-3 Q8TAV0-3|Q8TAV0-4|E9PQL1|Q8TAV0-2 Isoform 3 of Protein FAM76A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34153.34153.4 25.68 23.14 4.543 3 1 1 0 974.7461 3816.0002 T101t TMT10 92 (K) CAQNVQLYGtPKPCQYCNIIAAFIGNK (C) CAQNVQLY(0.0)GT(0.99)PKPCQY(0.0)CNIIAAFIGNK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T FAM76A 39536.4 3 1 3566.1 48.06 HUMAN 1 -2.4952 17.0477 QNYLAVDSPPSGGGW-p Q8IWE2;S120-p QNYLAVDSPPSGGGW 0.369279912757546 0.0719209774521856 -0.140666666666667 -0.262 8.02498566082218 15.1929042581435 -0.140666666666667 -0.262 0.157580122558615 0.0302488991649527 -1.63949469228424 -2.91277867004549 Q8IWE2 FAM114A1 Q8IWE2.S120.p_FAM114A1 Q8IWE2_S120s _1_1_120_120 Q8IWE2 Q8IWE2 Protein NOXP20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.33605.33605.3 26.11 26.11 1.62 5 1 1 0 1237.9381 3631.8222 S120s TMT10 106 (R) SEIPLQEQNYLAVDsPPSGGGWAGWGSWGK (S) S(0.0)EIPLQEQNY(0.0)LAVDS(0.99)PPS(0.0)GGGWAGWGS(0.0)WGK K:TMT10,s:Phosphorylated S FAM114A1 61083 4 1 4192.1 35.61 HUMAN 1 -8.025 -15.1929 QNYQNSESGEKNEGS-p P67809;S167-p QNYQNSESGEKNEGS 0.608670397110072 0.790736236825949 -0.078 -0.0446666666666667 3.99233293033324 1.41922948251532 -0.078 -0.0446666666666666 0.398810612898738 0.721235428129108 -0.915663763613825 -0.3759266672103 P67809 YBX1 P67809.S167.p_YBX1 P67809_S165sS167s_2_2_165_167 P67809 P67809 Nuclease-sensitive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8229.8229.4 25.44 20.22 2.08 6 2 2 0 969.9144 3715.7221 N164n S165s S167s TMT10 157 (R) NYQQNYQnsEsGEKNEGSESAPEGQAQQR (R) N(0.0)Y(0.0)QQN(0.0)Y(0.0)QN(0.99)S(0.99)ES(0.99)GEKN(0.0)EGS(0.0)ES(0.0)APEGQAQQR K:TMT10,n:Deamidated,s:Phosphorylated S YBX1 35923.5 10 18 929.2 199.34 HUMAN 1 -3.9923 -1.4192 QNYRQAYSPRRGRSR-p Q9Y2W1;S119-p QNYRQAYSPRRGRSR 0.37516762199279 0.0699007719025612 0.148333333333333 0.271333333333333 7.88155357437074 15.3672014545557 0.148333333333333 0.271333333333333 0.162871329903911 0.0290589457749323 1.61460639989143 2.94562789394597 Q9Y2W1 THRAP3 Q9Y2W1.S119.p_THRAP3 Q9Y2W1_S119s_1_1_119_119 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11153.11153.3 13.04 8.71 4.061 4 1 1 0 660.6357 1898.9459 N113n S119s TMT10 109 (R) SNWQnYRQAYsPR (R) S(0.0)N(0.0)WQN(0.99)Y(0.0)RQAY(0.0)S(0.99)PR n:Deamidated,s:Phosphorylated S THRAP3 108720.9 2 54 10.2 1293.04 HUMAN 1 7.8816 15.3672 QPAASGDSDDDEPPP-p O00264;S57-p QPAASGDSDDDEPPP 0.363292279428815 0.0253651387785585 -0.124666666666667 0.404333333333333 8.16556505005008 21.7182501223584 -0.124666666666667 0.404333333333333 0.152560988848019 0.00673247869512276 -1.66387011559018 4.25337225624417 O00264 PGRMC1 O00264.S57.p_PGRMC1 O00264_S57s _1_1_57_57 O00264 O00264|O00264-2 Membrane-associated progesterone receptor component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14814.14814.3 20.81 20.81 2.45 2 1 1 0 905.0938 2633.3005 S57s TMT10 45 (K) IVRGDQPAASGDsDDDEPPPLPR (L) IVRGDQPAAS(0.0)GDS(0.99)DDDEPPPLPR s:Phosphorylated S PGRMC1 21784.9 6 1 873.1 209.48 HUMAN 1 -8.1656 21.7183 QPAENESTPIQQLLE-p Q9H8M2;T139-p QPAENESTPIQQLLE 0.495458193368512 0.632397659573225 -0.319333333333333 0.424333333333333 5.61708483079451 2.70456032768313 -0.319333333333334 0.424333333333333 0.274341505084076 0.536468179813584 -1.21603687876583 0.659651185230304 Q9H8M2 BRD9 Q9H8M2.T139.p_BRD9 Q9H8M2_T139t _1_1_139_139 Q9H8M2 Q9H8M2 Bromodomain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36748.36748.3 19.51 19.51 1.195 3 1 1 0 887.4471 2580.3619 T139t TMT10 131 (R) TQPAENEStPIQQLLEHFLR (Q) T(0.0)QPAENES(0.0)T(0.99)PIQQLLEHFLR t:Phosphorylated T BRD9 67341.2 1 3 1044.1 184.76 HUMAN 1 -5.6171 2.7046 QPAERRASNDQRPQE-p Q9Y2I1;S1038-p QPAERRASNDQRPQE 0.0613809554565416 0.327570173580285 -0.422333333333333 -0.0966666666666666 26.4094995460789 6.41831581921841 -0.422333333333333 -0.0966666666666667 0.00228586219672665 0.228122655320342 -5.40984793881091 -1.35841225369622 Q9Y2I1 NISCH Q9Y2I1.S1038.p_NISCH Q9Y2I1_S1038s _1_1_1038_1038 Q9Y2I1 Q9Y2I1|Q9Y2I1-2 Nischarin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17596.17596.4 26.89 26.89 16.867 3 1 1 0 1050.5442 4119.1987 S1038s TMT10 1036 (R) RAsNDQRPQEVPAEALAPAPAEVPAPAPAAASASGPAK (T) RAS(0.99)NDQRPQEVPAEALAPAPAEVPAPAPAAAS(0.0)AS(0.0)GPAK K:TMT10,s:Phosphorylated S NISCH 168394.3 2 5 2683.1 74.06 HUMAN 1 -26.4095 -6.4183 QPAFQPDSPLPSVSP-p A0A1B0GUN9;S690-p QPAFQPDSPLPSVSP 0.435048063020442 0.246809409133514 0.133 0.185 6.65590154300405 8.00712282444998 0.133 0.185 0.215978164359613 0.158229595393141 1.40063569123617 1.63587721788024 A0A1B0GUN9 NotFound A0A1B0GUN9.S690.p_NotFound A0A1B0GUN9_S690s _1_1_690_690 A0A1B0GUN9 A0A1B0GUN9|B1AK53|B1AK53-2|A0A0A0MSQ4 Espin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.36382.36382.4 11.29 11.29 3.51 7 1 1 0 858.7013 3351.815 S690s TMT10 673 (K) GLTTVFSGIGQPAFQPDsPLPSVSPALSPVR (S) GLT(0.0)T(0.0)VFS(0.0)GIGQPAFQPDS(0.99)PLPS(0.0)VS(0.0)PALS(0.0)PVR s:Phosphorylated S ESPN 148931.7 1 3 2152.1 95.61 HUMAN 1 6.6559 8.0071 QPASELWSSDGAAGL-p Q9H1A4;S50-p QPASELWSSDGAAGL 0.775106158812795 0.0601157292691754 0.041 -0.264666666666667 2.1198993933173 16.2663758778924 0.041 -0.264666666666667 0.613776223460698 0.0236244883885648 0.535193886868707 -3.11725751717452 Q9H1A4 ANAPC1 Q9H1A4.S50.p_ANAPC1 Q9H1A4_S50sS51s_2_2_50_51 Q9H1A4 Q9H1A4|F8WAS1 Anaphase-promoting complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31240.31240.5 29.03 29.03 1.282 5 2 2 0 734.5653 3508.8688 S50s S51s TMT10 41 (R) QLQPASELWssDGAAGLVGSLQEVTIHEK (Q) QLQPAS(0.0)ELWS(0.99)S(0.99)DGAAGLVGS(0.0)LQEVT(0.0)IHEK K:TMT10,s:Phosphorylated S ANAPC1 218664.2 8 16 460.1 305.66 HUMAN 1 2.1199 -16.2664 QPATDGLSEPDVFAI-p Q6ZSR9;S120-p QPATDGLSEPDVFAI 0.96076165018253 0.169196046371314 -0.0106666666666667 0.162 0.333419513676821 10.1480149226195 -0.0106666666666667 0.162 0.926100350635748 0.0966492543382019 -0.0971550563184415 2.00661281770936 Q6ZSR9 NotFound Q6ZSR9.S120.p_NotFound Q6ZSR9_S120s _1_1_120_120 Q6ZSR9 Q6ZSR9 Uncharacterized protein FLJ45252 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.36767.36767.3 21.95 21.95 1.339 3 1 1 0 1059.5145 3096.5628 S120s TMT10 106 (K) NQFQAFTQPATDGLsEPDVFAIAPFR (S) NQFQAFT(0.0)QPAT(0.0)DGLS(0.99)EPDVFAIAPFR s:Phosphorylated S 38203.6 2 2 3163.1 58.95 HUMAN 1 -0.3334 10.148 QPATRHPSLRRGRRT-p Q68DK2;S765-p QPATRHPSLRRGRRT 0.595703687719654 0.0213404996074559 0.096 0.436666666666667 4.15165251222462 22.8454241902736 0.096 0.436666666666667 0.384445470786621 0.00519346944637337 0.946009359422488 4.51297000816262 Q68DK2 ZFYVE26 Q68DK2.S765.p_ZFYVE26 Q68DK2_S765s _1_1_765_765 Q68DK2 Q68DK2 Zinc finger FYVE domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5062.5062.4 11.51 11.51 2.144 3 1 1 0 409.4643 1554.8702 S765s TMT10 757 (R) YQPATRHPsLR (R) Y(0.0)QPAT(0.0)RHPS(0.99)LR s:Phosphorylated S ZFYVE26 289306.4 2 5 898.1 203.99 HUMAN 1 4.1517 22.8454 QPAVQEASPGVLLRG-p Q5VTJ3;S72-p QPAVQEASPGVLLRG 0.633988531229531 0.0476581928525677 -0.107666666666667 -0.236 3.6852380822984 17.6809967582928 -0.107666666666667 -0.236 0.428031954027927 0.0170569086741888 -0.856463165394967 -3.39527276568961 Q5VTJ3 KLHDC7A Q5VTJ3.S72.p_KLHDC7A Q5VTJ3_S72s _1_1_72_72 Q5VTJ3 Q5VTJ3 Kelch domain-containing protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20623.20623.4 13.34 13.34 6.106 2 1 1 0 915.9598 3580.8396 S72s TMT10 48 (R) WGGNGQAEAKEEAEGSGQPAVQEAsPGVLLR (G) WGGNGQAEAKEEAEGS(0.0)GQPAVQEAS(0.99)PGVLLR K:TMT10,s:Phosphorylated S KLHDC7A 85847.2 2 1 2398.1 85.23 HUMAN 1 -3.6852 -17.681 QPDGSSLSPAQSPSQ-p Q6WCQ1-2;S220-p QPDGSSLSPAQSPSQ 0.18142186480323 0.565720542292854 0.216333333333333 0.0883333333333333 14.6019890372688 3.33623433670039 0.216333333333333 0.0883333333333334 0.0346578083846384 0.463848937710842 2.8041318435061 0.787797799475915 Q6WCQ1 MPRIP Q6WCQ1.2.S220.p_MPRIP Q6WCQ1-2_S220s _1_1_220_220 Q6WCQ1-2 Q6WCQ1-2|Q6WCQ1-3 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15572.15572.5 23.8 16.76 2.14 12 1 1 0 999.8724 4915.354 S220s TMT10 212 (K) DQPDGSSLsPAQSPSQSQPPAASSLREPGLESKEEESAMSSDR (M) DQPDGS(0.0)S(0.0)LS(0.99)PAQS(0.0)PS(0.0)QS(0.0)QPPAAS(0.0)S(0.0)LREPGLES(0.0)KEEES(0.0)AMS(0.0)S(0.0)DR K:TMT10,s:Phosphorylated S MPRIP 118899.7 3 2 204.1 449.03 HUMAN 1 14.602 3.3362 QPDYDLDSEDEVFVN-p Q9H2F5;S119-p QPDYDLDSEDEVFVN 0.84768925371821 0.068654599798033 0.0276666666666667 0.222333333333333 1.38962899670572 15.473355420832 0.0276666666666667 0.222333333333333 0.72616798889542 0.0283572725871022 0.36894624197341 2.96569921870704 Q9H2F5 EPC1 Q9H2F5.S119.p_EPC1 Q9H2F5_S119s _1_1_119_119 Q9H2F5 Q9H2F5|Q9H2F5-2|Q9H2F5-3 Enhancer of polycomb homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32068.32068.5 22.35 22.35 2.49 3 1 1 0 789.3892 3862.9427 S119s TMT10 99 (K) QLIHIQPFSLDAEQPDYDLDsEDEVFVNK (L) QLIHIQPFS(0.0)LDAEQPDY(0.0)DLDS(0.99)EDEVFVNK K:TMT10,s:Phosphorylated S EPC1 94032.2 3 1 2237.1 92.28 HUMAN 1 1.3896 15.4734 QPDYDMDSEDETLLN-p Q52LR7;S119-p QPDYDMDSEDETLLN 0.168210601929357 0.271759353728574 0.268666666666667 -0.131666666666667 15.4538146154234 7.45263342247251 0.268666666666667 -0.131666666666667 0.0284851518172806 0.179778046812993 2.96400575756022 -1.53958123231665 Q52LR7 EPC2 Q52LR7.S119.p_EPC2 Q52LR7_S119s_1_1_119_119 Q52LR7 Q52LR7 Enhancer of polycomb homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28299.28299.4 25.09 25.09 2.841 3 1 1 0 966.1833 3765.754 M117m S119s TMT10 99 (K) QFIHIQPFNLDNEQPDYDmDsEDETLLNR (L) QFIHIQPFNLDNEQPDY(0.0)DM(1.0)DS(0.99)EDET(0.0)LLNR m:Oxidized methionine,s:Phosphorylated S EPC2 91949.1 7 2 1676.1 121.76 HUMAN 1 15.4538 -7.4526 QPEDLVYSQPEMRER-p Q15678;S486-p QPEDLVYSQPEMRER 0.795630331817917 0.470876532049206 0.0493333333333333 0.074 1.91874087194502 4.36033495731885 0.0493333333333333 0.074 0.642874075534301 0.366409313590081 0.490730465875097 0.985233091966504 Q15678 PTPN14 Q15678.S486.p_PTPN14 Q15678_S486s _1_1_486_486 Q15678 Q15678 Tyrosine-protein phosphatase non-receptor type 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22677.22677.3 26.98 26.98 5.862 4 1 1 0 1056.8398 3088.536 S486s TMT10 468 (R) NLNIINTHAYNQPEDLVYsQPEMR (E) NLNIINT(0.0)HAY(0.0)NQPEDLVY(0.0)S(0.99)QPEMR s:Phosphorylated S PTPN14 136114.4 8 5 337.1 355.06 HUMAN 1 1.9187 4.3603 QPEPGAASPQRQQDL-p Q9H6F5;S91-p QPEPGAASPQRQQDL 0.190847198867699 0.395606948961134 0.204333333333333 0.152333333333333 14.064650991254 5.35415980444178 0.204333333333333 0.152333333333333 0.039222466511633 0.291463395165916 2.70479625648518 1.16833135519325 Q9H6F5 CCDC86 Q9H6F5.S91.p_CCDC86 Q9H6F5_S91s _1_1_91_91 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13512.13512.5 26.43 24.59 3.392 3 1 1 0 789.5912 3863.9586 S91s TMT10 72 (R) LQQGAGLESPQGQPEPGAAsPQRQQDLHLESPQR (Q) LQQGAGLES(0.0)PQGQPEPGAAS(0.99)PQRQQDLHLES(0.0)PQR s:Phosphorylated S CCDC86 40349 12 9 346.1 352.36 HUMAN 1 14.0647 5.3542 QPEYSPESPRCQPKP-p Q9H6F5;S113-p QPEYSPESPRCQPKP 0.765963295929894 0.222058756122731 0.05 0.215666666666667 2.2235333461372 8.60702776801623 0.05 0.215666666666667 0.599303294875913 0.137815232846073 0.557755137631884 1.73974123800176 Q9H6F5 CCDC86 Q9H6F5.S113.p_CCDC86 Q9H6F5_S113s _1_1_113_113 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9273.9273.5 14.03 14.03 1.169 4 1 1 0 642.5234 3128.629 S113s TMT10 106 (R) QPEYSPEsPRCQPKPSEEAPK (C) QPEY(0.0)S(0.0)PES(0.99)PRCQPKPS(0.0)EEAPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCDC86 40349 12 11 346.1 352.36 HUMAN 1 2.2235 8.607 QPFGFIDSDTDAEEE-p Q14676;S329-p QPFGFIDSDTDAEEE 0.871044768133441 0.0503590637942873 0.0253333333333333 0.239333333333333 1.17388338544087 17.3466917463037 0.0253333333333333 0.239333333333333 0.763153080230761 0.0184217475030915 0.316943968420102 3.32863241291952 Q14676 MDC1 Q14676.S329.p_MDC1 Q14676_S329s _1_1_329_329 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28877.29079.5 24.34 24.79 1.17 3 1 1 0 794.6202 3889.1024 S329s TMT10 321 (R) AQPFGFIDsDTDAEEERIPATPVVIPMKK (R) AQPFGFIDS(0.99)DT(0.0)DAEEERIPAT(0.0)PVVIPMKK K:TMT10,s:Phosphorylated S MDC1 227803.2 40 10 6.1 1662.62 HUMAN 1 1.1739 17.3467 QPFPGNDSPKEKDPE-p P42566;S814-p QPFPGNDSPKEKDPE 0.134264480831341 0.0489661533055967 -0.670666666666667 0.270333333333333 17.9106383392133 17.522699532428 -0.670666666666667 0.270333333333333 0.0161784222480481 0.0176900901762822 -3.44420277079749 3.36364259098701 P42566 EPS15 P42566.S814.p_EPS15 P42566_S814s _1_1_814_814 P42566 P42566|B1AUU8|P42566-2 Epidermal growth factor receptor substrate 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28045.28045.4 20.79 14.83 20.787 3 1 1 0 1003.5322 3931.1412 S814s TMT10 790 (R) SINKLDSPDPFKLNDPFQPFPGNDsPK (E) S(0.0)INKLDS(0.0)PDPFKLNDPFQPFPGNDS(0.99)PK K:TMT10,s:Phosphorylated S EPS15 99281.5 13 16 342.1 353.17 HUMAN 1 -17.9106 17.5227 QPFQRSISADDDLQE-p P18615-3;S122-p QPFQRSISADDDLQE 0.102562191990377 0.00908580846191256 0.33 0.598333333333333 20.9196428817427 28.8850017700535 0.33 0.598333333333333 0.00809162433479337 0.00129270617393855 4.07915459931133 6.0907416059358 P18615 NELFE P18615.3.S122.p_NELFE P18615-3_S122s _1_1_122_122 P18615-3 P18615-3|P18615-4 Isoform 2 of Negative elongation factor E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11015.11015.2 16.52 16.52 3.232 4 1 1 0 866.3854 1651.7972 S122s TMT10 120 (R) SIsADDDLQESSR (R) S(0.0)IS(0.99)ADDDLQES(0.0)S(0.0)R s:Phosphorylated S NELFE 44038 10 3 611.1 261.65 HUMAN 1 20.9196 28.885 QPGGGPPSPPPGIPG-p Q9C0C4;S760-p QPGGGPPSPPPGIPG 0.865557686443598 0.156450623628829 0.0293333333333333 -0.153333333333333 1.21896686221234 10.593508414147 0.0293333333333333 -0.153333333333333 0.755271876991791 0.0872266430045122 0.327936657984531 -2.08413890228544 Q9C0C4 SEMA4C Q9C0C4.S760.p_SEMA4C Q9C0C4_S760s _1_1_760_760 Q9C0C4 Q9C0C4 Semaphorin-4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18965.19168.3 13.68 13.68 13.676 3 1 1 0 886.4424 2577.3445 S760s TMT10 752 (R) CQPGGGPPsPPPGIPGQPLPSPTR (L) CQPGGGPPS(0.99)PPPGIPGQPLPS(0.0)PT(0.0)R C:Carbamidomethylation,s:Phosphorylated S SEMA4C 93819.3 1 2 3588.1 47.65 HUMAN 1 1.219 -10.5935 QPGIHPKTPNKFKKY-p F8W8D3;T178-p QPGIHPKTPNKFKKY 0.036022948076598 0.00273649503124045 -0.924333333333333 -0.851333333333333 33.3995839903262 38.8611783922453 -0.924333333333334 -0.851333333333333 0.000457131976083324 0.000129981684458315 -7.53694977628707 -9.63074839593157 F8W8D3 NotFound F8W8D3.T178.p_NotFound F8W8D3_T178t _1_1_178_178 F8W8D3 F8W8D3|Q14493|E7EUV9|Q14493-2 Histone RNA hairpin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7579.7579.4 16.32 16.32 99 1 1 1 0 496.7895 1904.1685 T178t TMT10 171 (R) QPGIHPKtPNK (F) QPGIHPKT(1.0)PNK K:TMT10,t:Phosphorylated T SLBP 32379.3 10 4 2635.1 75.75 HUMAN 1 -33.3996 -38.8612 QPGKRSRSPSSPRHA-p O95382;S914-p QPGKRSRSPSSPRHA 0.0884809517257935 0.836174775398012 0.773333333333333 -0.0616666666666666 22.438362949807 1.09102817101371 0.773333333333333 -0.0616666666666666 0.00570379233214113 0.777852376481409 4.42289807370964 -0.296528987664621 O95382 MAP3K6 O95382.S914.p_MAP3K6 O95382_S914s _1_1_914_914 O95382 O95382|O95382-3|O95382-2 Mitogen-activated protein kinase kinase kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3000.3000.3 7.86 7.86 1.363 4 1 1 0 394.8661 1102.6166 S914s TMT10 912 (R) SRsPSSPR (H) S(0.0)RS(0.99)PS(0.0)S(0.0)PR s:Phosphorylated S MAP3K6 144305.1 1 2 3537.1 48.8 HUMAN 1 22.4384 -1.091 QPGNLPGSNRRLQTR-p P46013;S1815-p QPGNLPGSNRRLQTR 0.588385614148587 0.0102221069934532 0.106 -0.430666666666667 4.24256255143786 27.949691376197 0.106 -0.430666666666667 0.376481590744126 0.00160335932657726 0.963220879669591 -5.82335828805783 P46013 MKI67 P46013.S1815.p_MKI67 P46013_S1815s _1_1_1815_1815 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23707.23707.4 14.77 14.77 4.048 3 1 1 0 819.688 3195.7639 S1815s TMT10 1794 (K) DINTFLGTPVQKLDQPGNLPGsNRR (L) DINT(0.0)FLGT(0.0)PVQKLDQPGNLPGS(0.99)NRR K:TMT10,s:Phosphorylated S MKI67 360912.4 2 58 5.1 1918.46 HUMAN 1 4.2426 -27.9497 QPGPHPPSPQAAAPG-p O15156-2;S10-p QPGPHPPSPQAAAPG 0.739021165125623 0.868256775408576 0.0503333333333333 0.0176666666666667 2.49069060921181 0.863678778053094 0.0503333333333333 0.0176666666666667 0.563548034054133 0.819656943417044 0.614921542772116 0.239302063214289 O15156 ZBTB7B O15156.2.S10.p_ZBTB7B O15156-2_S10s _1_1_10_10 O15156-2 O15156-2 Isoform 2 of Zinc finger and BTB domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31525.31525.5 15.54 15.54 5.253 3 1 1 0 785.7774 3844.8955 S10s Acetyl 1 (-) MLQPGPHPPsPQAAAPGEAWPGPSQAPWQSLEEK (M) MLQPGPHPPS(0.99)PQAAAPGEAWPGPS(0.0)QAPWQS(0.0)LEEK K:TMT10,s:Phosphorylated S ZBTB7B 62495.7 1 12 701.2 240.09 HUMAN 1 2.4907 0.8637 QPGPLNGSGQLKMPS-p P08651;S427-p QPGPLNGSGQLKMPS 0.618298666548247 0.206239833834715 -0.0663333333333333 0.166 3.8783954266568 9.02010291528325 -0.0663333333333334 0.166 0.409411895838143 0.125311147945684 -0.893812260579615 1.81118979234071 P08651 NFIC P08651.S427.p_NFIC P08651_S427s _1_1_427_427 P08651 A0A286YEX4|P08651|P08651-2 Nuclear factor 1 C-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25458.25458.4 13.59 13.59 3.357 3 1 1 0 748.3821 2910.5395 S427s TMT10 408 (K) DLVSLACDPASQQPGPLNGsGQLK (M) DLVS(0.0)LACDPAS(0.0)QQPGPLNGS(0.99)GQLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NFIC 56130.4 2 13 674.1 247.72 HUMAN 1 -3.8784 9.0201 QPGVDSLSPVASLPK-p Q9UBW7;S305-p QPGVDSLSPVASLPK 0.897297614132302 0.954075990522063 -0.022 -0.00733333333333328 0.922350529603976 0.290880598025961 -0.022 -0.00733333333333329 0.808658111138374 0.93521602566718 -0.254285833959745 -0.0851261914892322 Q9UBW7 ZMYM2 Q9UBW7.S305.p_ZMYM2 Q9UBW7_S305s _1_1_305_305 Q9UBW7 Q9UBW7|Q9UBW7-2 Zinc finger MYM-type protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19369.19369.3 16.96 16.96 2.541 3 1 1 0 878.1603 2552.5015 S305s TMT10 295 (R) NQKQPGVDSLsPVASLPK (Q) NQKQPGVDS(0.0)LS(0.99)PVAS(0.0)LPK K:TMT10,s:Phosphorylated S ZMYM2 158502.5 9 3 750.1 232.41 HUMAN 1 -0.9224 -0.2909 QPIHRIDSPGFKPAS-p G3V1L9;S912-p QPIHRIDSPGFKPAS 0.195880649499579 0.0685654729305212 -0.210333333333333 -0.309666666666667 13.806325220896 15.4824990827966 -0.210333333333333 -0.309666666666667 0.0416262681838529 0.0282976318220474 -2.65742786599011 -2.96743040054254 G3V1L9 TJP1 G3V1L9.S912.p_TJP1 G3V1L9_S912s _1_1_912_912 G3V1L9 G3V1L9|Q07157 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14101.14101.3 13.89 6.94 4.109 2 1 1 0 724.0683 2090.2213 S912s TMT10 910 (R) IDsPGFKPASQQK (A) IDS(0.99)PGFKPAS(0.0)QQK K:TMT10,s:Phosphorylated S TJP1 197797.8 5 52 41.2 827.72 HUMAN 1 -13.8063 -15.4825 QPKAKEESPSKAGMN-p Q6ZN18;S371-p QPKAKEESPSKAGMN 0.182003668118224 0.607618331394117 0.274333333333333 -0.142666666666667 14.5622182913392 2.93800752246155 0.274333333333333 -0.142666666666667 0.0349766467518024 0.508392631931363 2.79674096863763 -0.707694399627149 Q6ZN18 AEBP2 Q6ZN18.S371.p_AEBP2 Q6ZN18_S371s _1_1_371_371 Q6ZN18 Q6ZN18|Q6ZN18-2|Q6ZN18-3|G5EA50 Zinc finger protein AEBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5159.5159.3 9.82 5.49 1.168 2 1 1 0 548.306 1562.9357 S371s TMT10 367 (K) AKEEsPSK (A) AKEES(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S AEBP2 54979.1 1 6 1557.1 131.71 HUMAN 1 14.5622 -2.938 QPKEITWSPSRVFPP-p J3KPF0;S2363-p QPKEITWSPSRVFPP 0.736091100646977 0.0910630018690853 -0.0526666666666667 -0.293666666666667 2.52143572393468 13.7638387389273 -0.0526666666666667 -0.293666666666667 0.559572583127481 0.0420354911453616 -0.621413842546871 -2.64810421513599 J3KPF0 NotFound J3KPF0.S2363.p_NotFound J3KPF0_S2363s _1_1_2363_2363 J3KPF0 J3KPF0|F8VWT9|Q9Y4D8|Q9Y4D8-4 Probable E3 ubiquitin-protein ligase HECTD4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25446.25446.3 13.96 13.68 1.292 3 1 1 0 660.6825 1900.0642 S2363s TMT10 2359 (K) EITWsPSRVFPPVR (A) EIT(0.0)WS(0.99)PS(0.0)RVFPPVR s:Phosphorylated S HECTD4 490564.1 1 10 927.1 199.75 HUMAN 1 -2.5214 -13.7638 QPKERPRSAVLLVDE-p Q12802-2;S1880-p QPKERPRSAVLLVDE 0.80985687781266 0.335806143312132 0.0456666666666667 -0.0943333333333333 1.76155353219139 6.27995610006513 0.0456666666666667 -0.0943333333333334 0.666568285749601 0.235507308964004 0.455324011575156 -1.33395470483437 Q12802 AKAP13 Q12802.2.S1880.p_AKAP13 Q12802-2_S1880s _1_1_1880_1880 Q12802-2 Q12802-2|Q12802-4|A8MYJ1|A0A087WTD7 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19606.19606.5 22.96 22.96 16.472 4 1 1 0 585.1186 2841.5896 S1880s TMT10 1876 (K) ERPRsAVLLVDETATTPIFANRR (S) ERPRS(0.99)AVLLVDET(0.0)AT(0.0)T(0.0)PIFANRR s:Phosphorylated S AKAP13 310921 8 15 66.1 683.25 HUMAN 1 1.7616 -6.28 QPKLQPPSPANSGSL-p Q8NFD5-3;S1222-p QPKLQPPSPANSGSL 0.964401735367619 0.190301368636202 -0.00866666666666666 0.134666666666667 0.304429004213022 9.47509399227809 -0.00866666666666667 0.134666666666667 0.932303038353773 0.112847151429408 -0.0889737550624496 1.88992247562603 Q8NFD5 ARID1B Q8NFD5.3.S1222.p_ARID1B Q8NFD5-3_S1222s_1_1_1222_1222 Q8NFD5-3 Q8NFD5-3|Q8NFD5-2|A0A1B0GVK1|Q8NFD5-4|A0A1B0GWJ2 Isoform 3 of AT-rich interactive domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20456.20456.5 24.11 22.72 0 12 1 1 0 1172.9683 5764.8522 S1222s M1266m TMT10 1218 (K) LQPPsPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPmQGGR (S) LQPPS(0.99)PANS(0.0)GS(0.0)LQGPQT(0.0)PQS(0.0)T(0.0)GS(0.0)NS(0.0)M(0.0)AEVPGDLKPPT(0.0)PAS(0.0)T(0.0)PHGQM(0.50)T(0.0)PM(0.50)QGGR K:TMT10,s:Phosphorylated S,m:Oxidized methionine ARID1B 242543.1 3 10 656.1 253.59 HUMAN 1 -0.3044 9.4751 QPKPKIESPKLERTP-p Q92598;S809-p QPKPKIESPKLERTP 0.885820345057877 0.0696482233528966 -0.0256666666666667 -0.401666666666667 1.0371119662045 15.3878215527041 -0.0256666666666667 -0.401666666666667 0.787569344764888 0.0289213022853719 -0.283161840362453 -2.94952282068728 Q92598 HSPH1 Q92598.S809.p_HSPH1 Q92598_S809s _1_1_809_809 Q92598 Q92598|Q92598-3|Q92598-2|A0A0A0MSM0 Heat shock protein 105 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15236.15236.5 23.14 23.14 2.138 3 1 1 0 761.4245 3723.1285 S809s TMT10 791 (K) ELNNTCEPVVTQPKPKIEsPKLER (T) ELNNT(0.0)CEPVVT(0.0)QPKPKIES(0.99)PKLER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HSPH1 97776.1 11 24 549.2 274.67 HUMAN 1 -1.0371 -15.3878 QPKRYALSPKTTITM-p Q52LJ0-2;S261-p QPKRYALSPKTTITM 0.159845829771225 0.0133262814067011 -0.260666666666667 0.734333333333333 15.9412394233725 26.0822780271839 -0.260666666666667 0.734333333333334 0.0254610352206288 0.00246474615212684 -3.05691575074575 5.31619837758765 Q52LJ0 FAM98B Q52LJ0.2.S261.p_FAM98B Q52LJ0-2_S261s _1_1_261_261 Q52LJ0-2 Q52LJ0-2 Isoform 2 of Protein FAM98B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9940.9940.3 8.16 2.41 4.095 2 1 1 0 458.2629 1292.8091 S261s TMT10 257 (K) RYALsPK (T) RY(0.0)ALS(0.99)PK K:TMT10,s:Phosphorylated S FAM98B 45945.8 1 1 7014.1 8.16 HUMAN 1 -15.9412 26.0823 QPKSFENSPGDLGNS-p P55197;S436-p QPKSFENSPGDLGNS 0.195954837597201 0.380717688300981 0.423333333333333 -0.186666666666667 13.7936763323058 5.57491844814036 0.423333333333333 -0.186666666666667 0.0417476820062404 0.277018105716191 2.65511468839834 -1.20818119048741 P55197 MLLT10 P55197.S436.p_MLLT10 P55197_S436s _1_1_436_436 P55197 P55197|P55197-1 Protein AF-10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20845.20845.3 15.64 15.64 1.725 6 1 1 0 860.4119 2499.2768 S436s TMT10 432 (K) SFENsPGDLGNSSLPTAGYK (R) S(0.0)FENS(0.99)PGDLGNS(0.0)S(0.0)LPT(0.0)AGY(0.0)K K:TMT10,s:Phosphorylated S MLLT10 114516.6 2 1 3514.1 49.29 HUMAN 1 13.7937 -5.5749 QPLAEHFSPFRVQHM-p A0A0A0MTL5;S190-p QPLAEHFSPFRVQHM 0.106562833231388 0.00457123761421351 0.302666666666667 -0.659 20.4724893687028 34.2640343016347 0.302666666666667 -0.659 0.0089691453721729 0.000374624839454261 3.9810934377227 -7.82717075827393 A0A0A0MTL5 NotFound A0A0A0MTL5.S190.p_NotFound A0A0A0MTL5_S190s _1_1_190_190 A0A0A0MTL5 A0A0A0MTL5|Q13309|Q13309-2 S-phase kinase-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25283.25283.3 17.02 17.02 17.018 2 1 1 0 706.6624 2038.0054 S190s TMT10 179 (R) SFMDQPLAEHFsPFR (V) S(0.0)FMDQPLAEHFS(0.99)PFR s:Phosphorylated S SKP2 49683.1 1 3 2389.1 85.56 HUMAN 1 20.4725 -34.264 QPLASTASDNDFVTP-p Q15021;S1333-p QPLASTASDNDFVTP 0.853118678978918 0.231742220072576 0.0376666666666667 -0.153666666666667 1.33621336305947 8.36437328682041 0.0376666666666667 -0.153666666666667 0.735154574025233 0.145734599338994 0.356210331599603 -1.69775396863211 Q15021 NCAPD2 Q15021.S1333.p_NCAPD2 Q15021_S1333s _1_1_1333_1333 Q15021 Q15021 Condensin complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20311.20311.3 19.95 19.95 1.132 5 1 1 0 806.3788 2337.156 S1333s TMT10 1325 (R) YQPLASTAsDNDFVTPEPR (R) Y(0.0)QPLAS(0.0)T(0.0)AS(0.99)DNDFVT(0.0)PEPR s:Phosphorylated S NCAPD2 158605.7 7 7 1192.1 168.06 HUMAN 1 1.3362 -8.3644 QPLDRRGSGEPTPQK-p Q9H6A9;S287-p QPLDRRGSGEPTPQK 0.952116897136617 0.0135738816995139 0.00933333333333333 0.364333333333333 0.423210585727123 25.9495630688132 0.00933333333333333 0.364333333333334 0.907149658527676 0.00254122835836474 0.122201394340369 5.28144177242598 Q9H6A9 PCNXL3 Q9H6A9.S287.p_PCNXL3 Q9H6A9_S287s _1_1_287_287 Q9H6A9 Q9H6A9|Q9H6A9-2 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8233.8233.4 14.21 10.51 1.403 3 1 1 0 653.0857 2529.3574 S287s TMT10 275 (R) GAGGYQPLDRRGsGEPTPQK (A) GAGGY(0.0)QPLDRRGS(0.99)GEPT(0.0)PQK K:TMT10,s:Phosphorylated S PCNX3 224430.8 7 10 168.1 492.45 HUMAN 1 0.4232 25.9496 QPLGQAKSLEDLRAP-p Q8TEH3;S592-p QPLGQAKSLEDLRAP 0.440361201395823 0.388713439962835 -0.166333333333333 0.12 6.56293179921466 5.45519451600311 -0.166333333333333 0.12 0.2206514674478 0.284761025580165 -1.38426823005955 1.18660082377405 Q8TEH3 DENND1A Q8TEH3.S592.p_DENND1A Q8TEH3_S592s _1_1_592_592 Q8TEH3 Q8TEH3-6|Q8TEH3-7 DENN domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14210.14421.3 11.91 7.94 99 1 1 1 0 522.9602 1486.8993 S592s TMT10 592 (K) sLEDLRAPK (D) S(1.0)LEDLRAPK K:TMT10,s:Phosphorylated S DENND1A 111202.8 3 5 882.1 207.04 HUMAN 1 -6.5629 5.4552 QPLHLEPSPPASPTQ-p P24394;S470-p QPLHLEPSPPASPTQ 0.878629426218163 0.776385332570271 0.0243333333333333 -0.0456666666666667 1.10380849807686 1.52118103177588 0.0243333333333333 -0.0456666666666667 0.775566693577129 0.704501458945035 0.299718756834104 -0.399901635785323 P24394 IL4R P24394.S470.p_IL4R P24394_S470s _1_1_470_470 P24394 P24394|P24394-3 Interleukin-4 receptor subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26022.26022.4 28.7 28.7 1.15 8 1 1 0 1077.5328 4227.123 S470s TMT10 462 (K) EQPLHLEPsPPASPTQSPDNLTCTETPLVIAGNPAYR (S) EQPLHLEPS(0.99)PPAS(0.0)PT(0.0)QS(0.0)PDNLT(0.0)CT(0.0)ET(0.0)PLVIAGNPAY(0.0)R C:Carbamidomethylation,s:Phosphorylated S IL4R 91653.5 1 1 4619.1 28.7 HUMAN 1 1.1038 -1.5212 QPLKHSDSKEDDGQE-p Q5ZPR3;S525-p QPLKHSDSKEDDGQE 0.298289139550046 0.0583147404245154 0.228666666666667 -0.351666666666667 9.87841581259302 16.4445737449811 0.228666666666667 -0.351666666666667 0.102839135873779 0.0226747561633733 1.96059467037657 -3.15172124783337 Q5ZPR3 CD276 Q5ZPR3.S525.p_CD276 Q5ZPR3_S525s _1_1_525_525 Q5ZPR3 Q5ZPR3|A0A0C4DGH0|Q5ZPR3-2 CD276 antigen HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14070.14285.4 19.47 19.47 2.428 3 1 1 0 738.1342 2869.551 S525s TMT10 515 (K) TALQPLKHSDsKEDDGQEIA (-) T(0.0)ALQPLKHS(0.0)DS(0.99)KEDDGQEIA K:TMT10,s:Phosphorylated S CD276 57976.1 10 1 3497.1 49.74 HUMAN 1 9.8784 -16.4446 QPLLKKESKGPIVPL-p P55011;S994-p QPLLKKESKGPIVPL 0.343971444723671 0.00257237100071961 0.153 -0.883 8.60790133599577 39.5420473892567 0.153 -0.883 0.137787514587559 0.000111120774844852 1.7404886515959 -9.92727358453629 P55011 SLC12A2 P55011.S994.p_SLC12A2 P55011_S994s _1_1_994_994 P55011 P55011|G3XAL9 Solute carrier family 12 member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17753.17753.4 13.46 13.46 99 1 1 1 0 680.6536 2639.6266 S994s TMT10 992 (K) KEsKGPIVPLNVADQK (L) KES(1.0)KGPIVPLNVADQK K:TMT10,s:Phosphorylated S SLC12A2 132129.4 1 5 2192.1 93.85 HUMAN 1 8.6079 -39.542 QPLPRSSSTSDILEP-p Q6GYQ0-2;S797-p QPLPRSSSTSDILEP 0.691412336220449 0.561023669495778 0.0623333333333333 -0.057 3.00403716719637 3.38391958249231 0.0623333333333333 -0.057 0.500721550415309 0.458783765682801 0.721232173471726 -0.797247557541341 Q6GYQ0 RALGAPA1 Q6GYQ0.2.S797.p_RALGAPA1 Q6GYQ0-2_S797s _1_1_797_797 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7|Q6GYQ0-4|Q6GYQ0-3 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24956.24956.2 14.94 11.42 1.12 6 1 1 0 988.9749 1896.9752 S797s TMT10 795 (R) SSsTSDILEPFTVER (A) S(0.0)S(0.0)S(0.99)T(0.0)S(0.0)DILEPFT(0.0)VER s:Phosphorylated S RALGAPA1 236609.9 4 12 317.1 366.49 HUMAN 1 3.004 -3.3839 QPLRTLRSTSGKSQA-p Q92609-2;S765-p QPLRTLRSTSGKSQA 0.0778192953261892 0.0970404511257879 0.458333333333333 -0.26 23.6996133435888 13.3932305334637 0.458333333333333 -0.26 0.00426617499263078 0.0457801221008752 4.72179031492853 -2.5807048497474 Q92609 TBC1D5 Q92609.2.S765.p_TBC1D5 Q92609-2_S765s _1_1_765_765 Q92609-2 Q92609-2 Isoform 2 of TBC1 domain family member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5724.5724.3 9 9 9.004 4 1 1 0 463.2621 1307.8047 S765s TMT10 762 (R) TLRsTSGK (S) T(0.0)LRS(0.99)T(0.0)S(0.0)GK K:TMT10,s:Phosphorylated S TBC1D5 91784.7 1 10 328.1 359.68 HUMAN 1 23.6996 -13.3932 QPLTEASYVNLPTIA-p A0A0C4DG17;Y144-p QPLTEASYVNLPTIA 0.148266672319898 0.732988868876773 0.316333333333333 -0.091 16.808019369214 1.86016737874131 0.316333333333333 -0.091 0.0208544174675585 0.651603280539213 3.22491759324072 -0.477553436797059 A0A0C4DG17 RPSA A0A0C4DG17.Y144.p_RPSA A0A0C4DG17_Y144y _1_1_144_144 A0A0C4DG17 A0A0C4DG17|P08865 40S ribosomal protein SA GG20160819_MSz_CCLE_T4D7_pY_Injection_02.31912.31912.3 31.13 30.77 1.229 6 1 1 0 1102.5416 3225.6411 Y144y TMT10 134 (R) ADHQPLTEASyVNLPTIALCNTDSPLR (Y) ADHQPLT(0.0)EAS(0.0)Y(0.99)VNLPT(0.0)IALCNT(0.0)DS(0.0)PLR C:Carbamidomethylation,y:Phosphorylated Y RPSA 33484.2 2 1 84.1 31.13 HUMAN 1 16.808 -1.8602 QPLTVPVSPKFSTRF-p Q9ULW0;S738-p QPLTVPVSPKFSTRF 0.847962800216493 0.00150398419880163 0.0313333333333333 -0.927666666666667 1.38651318679489 45.5600193686221 0.0313333333333333 -0.927666666666667 0.726689159057035 2.77970087084938e-05 0.368205762262271 -12.9389570420777 Q9ULW0 TPX2 Q9ULW0.S738.p_TPX2 Q9ULW0_S738s _1_1_738_738 Q9ULW0 Q9ULW0-2 Targeting protein for Xklp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17451.17451.3 16.69 16.69 5.67 4 1 1 0 631.6754 1813.0471 S738s TMT10 728 (K) SSDQPLTVPVsPK (F) S(0.0)S(0.0)DQPLT(0.0)VPVS(0.99)PK K:TMT10,s:Phosphorylated S TPX2 86279.1 6 13 599.1 263.33 HUMAN 1 1.3865 -45.56 QPMKRTVSDNSLSNS-p Q96RU3;S296-p QPMKRTVSDNSLSNS 0.690532796171725 0.246882736309663 -0.062 0.115 3.01455892220535 8.0052689262609 -0.062 0.115 0.499509908815299 0.15829715420213 -0.723367831259164 1.63555585355065 Q96RU3 FNBP1 Q96RU3.S296.p_FNBP1 Q96RU3_S296s _1_1_296_296 Q96RU3 Q96RU3|Q96RU3-2|Q96RU3-5|Q96RU3-3|Q96RU3-4|B7ZL14 Formin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9279.9279.4 14.35 11.79 2.496 5 1 1 0 636.3282 2462.3251 S296s Hydrogen 294 (R) TVsDNSLSNSRGEGKPDLK (F) T(0.0)VS(0.99)DNS(0.0)LS(0.0)NS(0.0)RGEGKPDLK K:TMT10-Lys-Only,s:Phosphorylated S FNBP1 71762 13 2 1764.1 116.78 HUMAN 1 -3.0146 8.0053 QPMNRAPSDSSLGTP-p Q15642;S296-p QPMNRAPSDSSLGTP 0.811946613276641 0.584764601466456 -0.0353333333333333 -0.0743333333333333 1.73924262871453 3.14705175946815 -0.0353333333333333 -0.0743333333333334 0.670001441573108 0.484501163202617 -0.450248504667181 -0.750016868801873 Q15642 TRIP10 Q15642.S296.p_TRIP10 Q15642_S296s _1_1_296_296 Q15642 Q15642|Q15642-3|W4VSQ9|Q15642-2|Q15642-4|M0R0F9 Cdc42-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7770.7770.3 18.67 18.67 4.779 5 1 1 0 763.6925 2209.0956 S296s Hydrogen 294 (R) APsDSSLGTPSDGRPELRGPGR (S) APS(0.99)DS(0.0)S(0.0)LGT(0.0)PS(0.0)DGRPELRGPGR s:Phosphorylated S TRIP10 68579.3 9 1 2083.1 98.23 HUMAN 1 -1.7392 -3.1471 QPNLSALSMPNLFGQ-p Q8TEH3;S891-p QPNLSALSMPNLFGQ 0.989464151490073 0.0883701757155326 0.00333333333333334 0.360333333333333 0.094293065035026 13.9454018113268 0.00333333333333334 0.360333333333333 0.978522223507727 0.0403143645675504 0.0281885037487934 2.68129878007644 Q8TEH3 DENND1A Q8TEH3.S891.p_DENND1A Q8TEH3_S891s_1_1_891_891 Q8TEH3 Q8TEH3-6|Q8TEH3-7 DENN domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.34890.34890.4 20.44 20.44 3.776 7 1 1 0 1060.0327 4156.1343 S891s N894n TMT10 883 (R) SQPNLSALsMPnLFGQMPMGTHTSPLQPLGPPAVAPSR (I) S(0.0)QPN(0.0)LS(0.0)ALS(0.99)MPN(0.99)LFGQMPMGT(0.0)HT(0.0)S(0.0)PLQPLGPPAVAPS(0.0)R s:Phosphorylated S,n:Deamidated DENND1A 111202.8 1 8 882.1 207.04 HUMAN 1 0.0943 13.9454 QPNRVEIYEKTVEVL-p Q96F07;Y108-p QPNRVEIYEKTVEVL 0.102728705875057 0.13379811282805 -0.311 0.179666666666667 20.8648359312029 11.5152009255394 -0.311 0.179666666666667 0.008194385795401 0.0705472204754464 -4.06706100946204 2.24556026714157 Q96F07 CYFIP2 Q96F07.Y108.p_CYFIP2 Q96F07_Y108y _1_1_108_108 Q96F07 Q96F07|Q7L576|Q96F07-2|E7EVJ5|H7C229 Cytoplasmic FMR1-interacting protein 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11470.11470.3 12.49 7.64 99 1 1 1 0 739.6977 2137.1112 Y108y TMT10 98 (K) CNEQPNRVEIyEK (T) CNEQPNRVEIY(1.0)EK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y CYFIP2 150392.7 2 1 286.1 12.49 HUMAN 1 -20.8648 11.5152 QPPLRRHSPPGRAPR-p Q9H6A9;S402-p QPPLRRHSPPGRAPR 0.428800530001446 0.211983976313256 0.132333333333333 0.139666666666667 6.7717942550432 8.86407543281312 0.132333333333333 0.139666666666667 0.2102909459019 0.129895006717702 1.42100485141729 1.78420267585549 Q9H6A9 PCNXL3 Q9H6A9.S402.p_PCNXL3 Q9H6A9_S402s _1_1_402_402 Q9H6A9 Q9H6A9|Q9H6A9-2 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.3081.3081.4 9.83 9.83 99 1 1 1 0 360.6948 1359.7919 S402s TMT10 400 (R) RHsPPGRAPR (R) RHS(1.0)PPGRAPR s:Phosphorylated S PCNX3 224430.8 15 13 168.1 492.45 HUMAN 1 6.7718 8.8641 QPPPAPRSAPPSPPF-p Q8WX93;S684-p QPPPAPRSAPPSPPF 0.81000756385821 0.230157682784655 -0.034 -0.141 1.75876992476778 8.40452900153036 -0.034 -0.141 0.666995659170694 0.144393319238365 -0.454691464488279 -1.70470393680167 Q8WX93 PALLD Q8WX93.S684.p_PALLD Q8WX93_S684sS688s_2_2_684_688 Q8WX93 Q8WX93|Q8WX93-3 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35992.35992.3 19.75 19.75 4.609 6 2 2 0 1233.8944 3539.7338 S684s S688s Hydrogen 684 (R) sAPPsPPFPPPPAFPELAACTPPASPEPMSALASR (S) S(0.99)APPS(0.99)PPFPPPPAFPELAACT(0.0)PPAS(0.0)PEPMS(0.0)ALAS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PALLD 151930.4 6 16 338.1 354.43 HUMAN 1 -1.7588 -8.4045 QPPPLPLSPQRQLSR-p Q9NYQ7-2;S3180-p QPPPLPLSPQRQLSR 0.383359267702751 0.283969421009169 -0.135666666666667 -0.107333333333333 7.70814136970642 7.20868616884962 -0.135666666666667 -0.107333333333333 0.169506307365572 0.190165348265051 -1.5844862914386 -1.49706940982718 Q9NYQ7 CELSR3 Q9NYQ7.2.S3180.p_CELSR3 Q9NYQ7-2_S3180s _1_1_3180_3180 Q9NYQ7-2 Q9NYQ7-2 Isoform 2 of Cadherin EGF LAG seven-pass G-type receptor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22705.22705.3 11.56 11.56 99 1 1 1 0 660.3449 1899.0537 S3180s TMT10 3169 (R) DLDPQPPPLPLsPQR (Q) DLDPQPPPLPLS(1.0)PQR s:Phosphorylated S CELSR3 363540.1 1 6 1821.1 112.78 HUMAN 1 -7.7081 -7.2087 QPPPPPRSPFYLDSL-p Q6ZRS2;S1882-p QPPPPPRSPFYLDSL 0.693549863312391 0.0352699392023924 -0.0533333333333333 -0.265 2.98091044057828 19.5561418551062 -0.0533333333333334 -0.265 0.503395067649719 0.0110760731291878 -0.716532320397507 -3.78089634807255 Q6ZRS2 SRCAP Q6ZRS2.S1882.p_SRCAP Q6ZRS2_S1882s _1_1_1882_1882 Q6ZRS2 Q6ZRS2|Q6ZRS2-2|Q6ZRS2-3|A0A0A0MS59 Helicase SRCAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18367.18367.4 17.18 17.18 5.748 3 1 1 0 698.6188 2711.4921 S1882s TMT10 1874 (R) RQPPPPPRsPFYLDSLEEK (R) RQPPPPPRS(0.99)PFY(0.0)LDS(0.0)LEEK K:TMT10,s:Phosphorylated S SRCAP 345203 2 5 219.1 428.72 HUMAN 1 -2.9809 -19.5561 QPPQQRRSPASPSQA-p Q8NE35-2;S192-p QPPQQRRSPASPSQA 0.397279351876213 0.828392356427733 0.135 -0.0223333333333333 7.39946049900222 1.14350580024711 0.135 -0.0223333333333333 0.181992692443626 0.768509817698906 1.53077123849754 -0.309466736755519 Q8NE35 CPEB3 Q8NE35.2.S192.p_CPEB3 Q8NE35-2_S192s _1_1_192_192 Q8NE35-2 Q8NE35|Q8NE35-2 Isoform 2 of Cytoplasmic polyadenylation element-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7649.7649.2 12.08 5.6 3.749 4 1 1 0 834.9024 1588.8281 S192s TMT10 192 (R) sPASPSQAPYAQR (S) S(0.99)PAS(0.0)PS(0.0)QAPY(0.0)AQR s:Phosphorylated S CPEB3 75066.7 2 1 2497.1 81.21 HUMAN 1 7.3995 -1.1435 QPPQRRHSIEKETPT-p Q08AE8;S523-p QPPQRRHSIEKETPT 0.978752621584428 0.114829360838091 0.00533333333333332 -0.480333333333333 0.184765931628456 12.399120031085 0.00533333333333337 -0.480333333333333 0.958348366282589 0.0575556544980634 0.0546893806904288 -2.40208831834319 Q08AE8 SPIRE1 Q08AE8.S523.p_SPIRE1 Q08AE8_S523s _1_1_523_523 Q08AE8 Q08AE8|Q08AE8-2|Q08AE8-5|Q08AE8-3|J3KNG6|Q08AE8-4 Protein spire homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4469.4469.4 12.85 12.85 4.812 3 1 1 0 527.038 2025.1605 S523s TMT10 521 (R) RHsIEKETPTNVR (Q) RHS(0.99)IEKET(0.0)PT(0.0)NVR K:TMT10,s:Phosphorylated S SPIRE1 86683.2 1 4 1694.1 120.62 HUMAN 1 0.1848 -12.3991 QPPRASQSPLRGASD-p A0A1B0GW05;S25-p QPPRASQSPLRGASD 0.902983188500654 0.739517032152624 0.0206666666666667 -0.0383333333333333 0.869726221818315 1.80723858886631 0.0206666666666667 -0.0383333333333333 0.818516385581651 0.659593156603695 0.240873627776357 -0.465625248521497 A0A1B0GW05 NotFound A0A1B0GW05.S25.p_NotFound A0A1B0GW05_S25s _1_1_25_25 A0A1B0GW05 A0A1B0GW05 Probable C-mannosyltransferase DPY19L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9819.9819.3 17.12 17.12 2.14 3 1 1 0 783.0464 2267.1578 S25s TMT10 22 (R) ASQsPLRGASDVGAGEPGPER (A) AS(0.0)QS(0.99)PLRGAS(0.0)DVGAGEPGPER s:Phosphorylated S DPY19L1 85445.2 8 1 2514.1 80.37 HUMAN 1 0.8697 -1.8072 QPPRPPASPDEPSVA-p O94964-2;S175-p QPPRPPASPDEPSVA 0.301376256583531 0.63484408396984 0.149333333333333 0.0523333333333333 9.77837646125339 2.6848103315735 0.149333333333333 0.0523333333333333 0.105235520604558 0.538913380699022 1.94323133494387 0.655546330406467 O94964 SOGA1 O94964.2.S175.p_SOGA1 O94964-2_S175s _1_1_175_175 O94964-2 O94964-2 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12023.12023.5 22.15 21.51 2.321 8 1 1 0 744.5677 3638.836 S175s TMT10 156 (R) TGQPAQPAPSAQQPPRPPAsPDEPSVAASSVGSSR (L) T(0.0)GQPAQPAPS(0.0)AQQPPRPPAS(0.99)PDEPS(0.0)VAAS(0.0)S(0.0)VGS(0.0)S(0.0)R s:Phosphorylated S SOGA1 185623.3 6 3 215.1 433.51 HUMAN 1 9.7784 2.6848 QPPRRGATPPAPPRA-p Q6SPF0;T107-p QPPRRGATPPAPPRA 0.723569805103133 0.230269293817126 0.0563333333333333 0.183 2.65988722699193 8.40069528382934 0.0563333333333333 0.183 0.542014964691519 0.144520838156231 0.650442472215762 1.70404044871842 Q6SPF0 SAMD1 Q6SPF0.T107.p_SAMD1 Q6SPF0_T107t _1_1_107_107 Q6SPF0 Q6SPF0 Atherin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5217.5217.3 12.22 12.22 99 1 1 1 0 423.2151 1187.6644 T107t Hydrogen 105 (R) GAtPPAPPRAPR (G) GAT(1.0)PPAPPRAPR t:Phosphorylated T SAMD1 56222 3 2 1432.1 142.81 HUMAN 1 2.6599 8.4007 QPPSGKTTPNSGDVQ-p P35269;T446-p QPPSGKTTPNSGDVQ 0.0866557243462627 0.00250305172310792 0.379333333333333 0.777666666666667 22.7039127314618 39.7721866764701 0.379333333333333 0.777666666666667 0.00536548180984259 0.000105385614530561 4.48477932882937 10.0293626474052 P35269 GTF2F1 P35269.T446.p_GTF2F1 P35269_T446t _1_1_446_446 P35269 P35269 General transcription factor IIF subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12672.12672.4 12.85 12.85 1.11 7 1 1 0 777.392 3026.5795 T446t TMT10 436 (K) STPQPPSGKTtPNSGDVQVTEDAVR (R) S(0.0)T(0.0)PQPPS(0.0)GKT(0.0)T(0.99)PNS(0.0)GDVQVT(0.0)EDAVR K:TMT10,t:Phosphorylated T GTF2F1 58296.5 2 10 1159.1 171.17 HUMAN 1 22.7039 39.7722 QPPVAEATPRSQEAT-p Q9UHD8;T235-p QPPVAEATPRSQEAT 0.577675605743183 0.0127794663735556 0.137 -0.395333333333333 4.38549946208001 26.3852980341816 0.137 -0.395333333333333 0.364292352073815 0.00229863596017378 0.990137485190361 -5.39617859310755 Q9UHD8 SEPT9 Q9UHD8.T235.p_SEPT9 Q9UHD8_T235t _1_1_235_235 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2|Q9UHD8-7|Q9UHD8-3|K7EJL9 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13560.13560.3 11.3 11.3 99 1 1 1 0 723.3991 2088.2217 T235t TMT10 223 (R) LEPKPQPPVAEAtPR (S) LEPKPQPPVAEAT(1.0)PR K:TMT10,t:Phosphorylated T SEPT9 65685.6 1 17 110.1 572.91 HUMAN 1 4.3855 -26.3853 QPPWASPSPTSRQSP-p A0A0G2JPP5;S1439-p QPPWASPSPTSRQSP 0.883146658005949 0.700686316454522 -0.024 0.0513333333333333 1.06540628001268 2.12352137695299 -0.024 0.0513333333333334 0.782455003423047 0.61326455205606 -0.290205382639489 0.535922575941966 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1439.p_SCRIB A0A0G2JPP5_S1439s _1_1_1439_1439 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25967.26643.4 27.08 27.08 1.57 5 1 1 0 845.1366 3297.5596 S1439s TMT10 1416 (R) LALDGETLGEEEQEDEQPPWASPsPTSR (Q) LALDGET(0.0)LGEEEQEDEQPPWAS(0.0)PS(0.99)PT(0.0)S(0.0)R s:Phosphorylated S SCRIB 178690.9 3 33 22.1 1004.81 HUMAN 1 -1.0654 2.1235 QPQLADVSPGLPAAQ-p Q14999-2;S423-p QPQLADVSPGLPAAQ 0.905774300473971 0.473349491362873 -0.019 -0.068 0.84384356005938 4.3297177481923 -0.019 -0.068 0.823409065210576 0.369001579528425 -0.234236109647017 -0.979477618169218 Q14999 CUL7 Q14999.2.S423.p_CUL7 Q14999-2_S423s _1_1_423_423 Q14999-2 Q14999-2 Isoform 2 of Cullin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29280.29280.3 20.33 18.14 7.259 4 1 1 0 1025.859 2995.5839 S423s TMT10 410 (R) SPGSIFQPQLADVsPGLPAAQAQPSFR (R) S(0.0)PGS(0.0)IFQPQLADVS(0.99)PGLPAAQAQPS(0.0)FR s:Phosphorylated S CUL7 201629.3 2 1 2489.1 81.32 HUMAN 1 -0.8438 -4.3297 QPQQQRWSIPADGRH-p P55040;S23-p QPQQQRWSIPADGRH 0.293822417676096 0.0133746183471685 -0.190333333333333 -0.521666666666667 10.0379124735598 26.0598469280102 -0.190333333333333 -0.521666666666667 0.0991308323284697 0.00247750937870759 -1.98829793258808 -5.31031231938135 P55040 GEM P55040.S23.p_GEM P55040_S23s _1_1_23_23 P55040 P55040 GTP-binding protein GEM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16888.16888.2 9 3.43 99 1 1 1 0 605.7949 1130.6156 S23s TMT10 22 (R) WsIPADGR (H) WS(1.0)IPADGR s:Phosphorylated S GEM 34348.3 2 1 2367.2 86.43 HUMAN 1 -10.0379 -26.0598 QPQRRRPSLLSEFQP-p Q9Y618;S67-p QPQRRRPSLLSEFQP 0.511216138148363 0.0127124067900697 0.173 -0.461333333333333 5.38774204172421 26.4277418410645 0.173 -0.461333333333333 0.289218317837265 0.00227628069873754 1.17466312537725 -5.40745109054316 Q9Y618 NCOR2 Q9Y618.S67.p_NCOR2 Q9Y618_S67s _1_1_67_67 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17938.17938.3 12.04 12.04 1.338 2 1 1 0 646.9928 1858.9973 S67s TMT10 65 (R) RPsLLSEFQPGNER (S) RPS(0.99)LLS(0.0)EFQPGNER s:Phosphorylated S NCOR2 275540.8 1 2 16.1 1053.89 HUMAN 1 5.3877 -26.4277 QPRADNPSPNLMPAS-p Q92585;S360-p QPRADNPSPNLMPAS 0.330990249170453 0.153264288230134 0.207 0.148 8.97345296961996 10.7124720565194 0.207 0.148 0.126664438730656 0.0848697248820243 1.80376732311717 2.10488927239562 Q92585 MAML1 Q92585.S360.p_MAML1 Q92585_S360s_1_1_360_360 Q92585 Q92585 Mastermind-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9284.9284.3 15.66 11.04 5.379 2 1 1 0 802.7094 2310.1458 S360s M364m TMT10 356 (R) ADNPsPNLmPASAQAQNAQR (A) ADNPS(0.99)PNLM(1.0)PAS(0.0)AQAQNAQR s:Phosphorylated S,m:Oxidized methionine MAML1 108508.8 3 8 1563.1 131.35 HUMAN 1 8.9735 10.7125 QPRAGGPSDDDNADK-p E7EVA0;S806-p QPRAGGPSDDDNADK 0.99560477611939 0.0880735545012091 0.000999999999999992 -0.189666666666667 0.0360920456926242 13.9669416643287 0.000999999999999981 -0.189666666666667 0.991723936110114 0.0401149110521646 0.0108604674738104 -2.68524471469188 E7EVA0 NotFound E7EVA0.S806.p_NotFound E7EVA0_S806s _1_1_806_806 E7EVA0 E7EVA0 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7296.7296.3 15.14 15.14 99 1 1 1 0 718.6948 2074.102 S806s TMT10 802 (R) AGGPsDDDNADKPK (G) AGGPS(1.0)DDDNADKPK K:TMT10,s:Phosphorylated S MAP4 246695.2 2 21 38.1 865.62 HUMAN 1 0.0361 -13.9669 QPRAGSSTPGDAPPA-p Q7Z6Z7;T2889-p QPRAGSSTPGDAPPA 0.525553689105919 0.387580537185384 0.0866666666666667 0.112666666666667 5.16783257380182 5.47231364446992 0.0866666666666667 0.112666666666667 0.30424030138322 0.283640756852344 1.13472723316057 1.18969103985268 Q7Z6Z7 HUWE1 Q7Z6Z7.T2889.p_HUWE1 Q7Z6Z7_S2888sT2889t_2_2_2888_2889 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15382.15382.2 11.48 11.48 1.17 3 2 2 0 1078.4801 1996.0297 S2888s T2889t TMT10 2885 (R) AGSstPGDAPPAVAEVQGR (S) AGS(0.0)S(0.99)T(0.99)PGDAPPAVAEVQGR s:Phosphorylated S,t:Phosphorylated T HUWE1 485818.9 2 70 11.1 1210.45 HUMAN 1 5.1678 5.4723 QPRDDVGSPRPRVIV-p A0A1B0GTQ2;S13-p QPRDDVGSPRPRVIV 0.359362450321461 0.00220348767094801 -0.233666666666667 -1.192 8.25779913091385 41.2245362615728 -0.233666666666667 -1.192 0.149355110298087 7.54303935909748e-05 -1.67985479634594 -10.6960914449772 A0A1B0GTQ2 NotFound A0A1B0GTQ2.S13.p_NotFound A0A1B0GTQ2_S13s _1_1_13_13 A0A1B0GTQ2 A0A1B0GTQ2|A0A1B0GWB1|P0DI83|A0A1C7CYW6 Ras-related protein Rab-34, isoform NARR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4573.4573.3 10.31 10.31 99 1 1 1 0 436.5487 1227.6643 S13s TMT10 9 (R) DDVGsPRPR (V) DDVGS(1.0)PRPR s:Phosphorylated S RAB34 27183.8 2 1 4877.1 25.55 HUMAN 1 -8.2578 -41.2245 QPRKPTHSQEPQGPE-p O95602;S1489-p QPRKPTHSQEPQGPE 0.147571881565505 0.0621883999768929 0.315333333333333 -0.228333333333333 16.871029171035 16.0547950922063 0.315333333333333 -0.228333333333333 0.0205540345823389 0.0248039296424546 3.23727585727221 -3.07653549165695 O95602 POLR1A O95602.S1489.p_POLR1A O95602_S1489s _1_1_1489_1489 O95602 O95602 DNA-directed RNA polymerase I subunit RPA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6244.6244.4 12.09 12.09 2.994 2 1 1 0 590.7921 2280.1807 S1489s TMT10 1485 (R) KPTHsQEPQGPEAMER (R) KPT(0.0)HS(0.99)QEPQGPEAMER K:TMT10,s:Phosphorylated S POLR1A 196804.6 4 3 2697.1 73.69 HUMAN 1 16.871 -16.0548 QPRVCTFSPQRVSPT-p Q99501;S292-p QPRVCTFSPQRVSPT 0.237453054523593 0.00455680991897422 -0.208333333333333 -0.550666666666667 11.9673109817254 34.3004034845456 -0.208333333333333 -0.550666666666667 0.0635724431093874 0.000371500712941467 -2.32653780778504 -7.8401862313391 Q99501 GAS2L1 Q99501.S292.p_GAS2L1 Q99501_S292s _1_1_292_292 Q99501 Q99501|A0A5E8|Q99501-4|Q99501-2 GAS2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10199.10199.2 11.88 6.88 2.963 2 1 1 0 652.3069 1223.6404 S292s TMT10 288 (R) VCTFsPQR (V) VCT(0.0)FS(0.99)PQR C:Carbamidomethylation,s:Phosphorylated S GAS2L1 73400.1 2 1 1084.1 179.86 HUMAN 1 -11.9673 -34.3004 QPRVQSWSPPVRGIP-p Q7Z6J0;S127-p QPRVQSWSPPVRGIP 0.31264973070947 0.110793235772177 0.178666666666667 -0.173666666666667 9.4476736287965 12.6140601042587 0.178666666666667 -0.173666666666667 0.113561896611308 0.054776463480522 1.88589041727275 -2.44045787646804 Q7Z6J0 SH3RF1 Q7Z6J0.S127.p_SH3RF1 Q7Z6J0_S127s _1_1_127_127 Q7Z6J0 Q7Z6J0|Q7Z6J0-3 E3 ubiquitin-protein ligase SH3RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17068.17068.2 8.88 8.88 1.14 2 1 1 0 682.8502 1284.7262 S127s TMT10 123 (R) VQSWsPPVR (G) VQS(0.0)WS(0.99)PPVR s:Phosphorylated S SH3RF1 94268.4 2 1 2961.1 64.64 HUMAN 1 9.4477 -12.6141 QPRWHPHSPNVRPSF-p Q9H329-2;S466-p QPRWHPHSPNVRPSF 0.574777890570195 0.639136684654497 0.0773333333333333 0.048 4.4219432908736 2.64809816863322 0.0773333333333333 0.048 0.361248182625339 0.543488279892852 0.996972967677701 0.647898623743855 Q9H329 EPB41L4B Q9H329.2.S466.p_EPB41L4B Q9H329-2_S466s _1_1_466_466 Q9H329-2 Q9H329-2 Isoform 2 of Band 4.1-like protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8438.8438.4 12.26 12.26 3.666 2 1 1 0 571.769 2204.0947 S466s TMT10 462 (R) WHPHsPNVRPSFQDDR (S) WHPHS(0.99)PNVRPS(0.0)FQDDR s:Phosphorylated S EPB41L4B 59078.9 1 4 4315.1 33.8 HUMAN 1 4.4219 2.6481 QPSFVPKSPDASSAF-p Q53GS7;S88-p QPSFVPKSPDASSAF 0.400118520360443 0.116976778952614 -0.165 0.253 7.34100698839645 12.2884685057506 -0.165 0.253 0.184458766938805 0.0590409245136005 -1.52058249093485 2.38238535348621 Q53GS7 GLE1 Q53GS7.S88.p_GLE1 Q53GS7_S88s _1_1_88_88 Q53GS7 Q53GS7|Q53GS7-2 Nucleoporin GLE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15143.15143.3 21 21 3.501 7 1 1 0 810.0676 2348.2134 S88s TMT10 88 (K) sPDASSAFSPASPATPNGTK (G) S(0.99)PDAS(0.0)S(0.0)AFS(0.0)PAS(0.0)PAT(0.0)PNGT(0.0)K K:TMT10,s:Phosphorylated S GLE1 80405.3 1 2 3903.1 41.03 HUMAN 1 -7.341 12.2885 QPSLNGGSPEGVESQ-p P38935;S716-p QPSLNGGSPEGVESQ 0.471067248334803 0.490518417207478 0.136333333333333 0.082 6.03507402500471 4.13457754991552 0.136333333333333 0.082 0.249168190045492 0.385959953145857 1.29080934086879 0.942604750801201 P38935 IGHMBP2 P38935.S716.p_IGHMBP2 P38935_S716s _1_1_716_716 P38935 P38935 DNA-binding protein SMUBP-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16848.16848.4 26.82 26.82 2.599 6 1 1 0 841.6393 3283.5665 S716s TMT10 701 (K) SLASEAPSQPSLNGGsPEGVESQDGVDHFR (A) S(0.0)LAS(0.0)EAPS(0.0)QPS(0.0)LNGGS(0.99)PEGVES(0.0)QDGVDHFR s:Phosphorylated S IGHMBP2 110060 2 2 4428.1 31.52 HUMAN 1 6.0351 4.1346 QPSQFRESVEAIGRI-p Q9NQ89;S256-p QPSQFRESVEAIGRI 0.0515638782216539 0.865180315175624 -0.501666666666667 0.03 28.1739212966989 0.886494842319575 -0.501666666666667 0.03 0.00152267728943532 0.815362091062162 -5.8952092787736 0.245135607235194 Q9NQ89 C12orf4 Q9NQ89.S256.p_C12orf4 Q9NQ89_S256s _1_1_256_256 Q9NQ89 Q9NQ89 Protein C12orf4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14209.14209.3 14.59 14.59 2.196 2 1 1 0 671.3446 1932.05 S256s TMT10 248 (K) VQPSQFREsVEAIGR (I) VQPS(0.0)QFRES(0.99)VEAIGR s:Phosphorylated S C12orf4 64484.1 1 2 4264.1 34.51 HUMAN 1 -28.1739 0.8865 QPSRFYHSVQDLSGG-p Q96II5;S160-p QPSRFYHSVQDLSGG 0.529820496067741 0.940373837726395 0.0893333333333333 0.00766666666666669 5.10471087071199 0.380540998472853 0.0893333333333333 0.00766666666666669 0.308694515060774 0.91610636410038 1.12321275181526 0.110343339113234 Q96II5 ARAF Q96II5.S160.p_ARAF Q96II5_S160s _1_1_160_160 Q96II5 Q96II5 ARAF protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13035.13035.3 17.78 13.57 6.011 4 1 1 0 587.9433 1681.8496 S160s TMT10 157 (R) FYHsVQDLSGGSR (Q) FY(0.0)HS(0.99)VQDLS(0.0)GGS(0.0)R s:Phosphorylated S ARAF 68723.3 1 31 441.2 311.96 HUMAN 1 5.1047 0.3805 QPSRPHGSPSRSKPK-p P55199;S442-p QPSRPHGSPSRSKPK 0.187863102695022 0.358280012288423 0.234 0.0993333333333334 14.2480334820296 5.91414126882731 0.234 0.0993333333333333 0.0376007624818183 0.256203980654707 2.73857260356572 1.26895560239841 P55199 ELL P55199.S442.p_ELL P55199_S442s _1_1_442_442 P55199 P55199|U3KQ90 RNA polymerase II elongation factor ELL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21078.21282.3 12.68 12.68 1.149 4 1 1 0 856.7695 2488.3292 S442s TMT10 425 (R) LGLPLLTDCAQPSRPHGsPSR (S) LGLPLLT(0.0)DCAQPS(0.0)RPHGS(0.99)PS(0.0)R C:Carbamidomethylation,s:Phosphorylated S ELL 69005.2 2 4 1646.1 123.88 HUMAN 1 14.248 5.9141 QPSSAPPTPTRLTGA-p Q08999;T986-p QPSSAPPTPTRLTGA 0.731310539054784 0.873268242874909 0.053 -0.018 2.57883243927625 0.829157781283029 0.053 -0.018 0.55222588016924 0.826198157020222 0.633488688747443 -0.230435589553681 Q08999 RBL2 Q08999.T986.p_RBL2 Q08999_T986t _1_1_986_986 Q08999 Q08999 Retinoblastoma-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15454.15454.3 11.26 11.26 1.156 8 1 1 0 739.3774 2136.1498 T986t TMT10 971 (R) SSSTLPVPQPSSAPPtPTR (L) S(0.0)S(0.0)S(0.0)T(0.0)LPVPQPS(0.0)S(0.0)APPT(0.99)PT(0.0)R t:Phosphorylated T RBL2 129790.7 1 13 408.1 323.79 HUMAN 1 2.5788 -0.8292 QPSSLFGSKSASSKN-p Q7Z6Z7;S2266-p QPSSLFGSKSASSKN 0.210044301362565 0.0719795906517435 -0.462666666666667 -0.378333333333333 13.0779901136774 15.1862235333267 -0.462666666666667 -0.378333333333333 0.0492267301045224 0.0302954666651639 -2.52512986811438 -2.91152217967348 Q7Z6Z7 HUWE1 Q7Z6Z7.S2266.p_HUWE1 Q7Z6Z7_S2266s _1_1_2266_2266 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23486.23486.3 16.47 16.47 2.484 3 1 1 0 605.6658 1735.0154 S2266s TMT10 2256 (R) IVNQPSSLFGsK (S) IVNQPS(0.0)S(0.0)LFGS(0.99)K K:TMT10,s:Phosphorylated S HUWE1 485818.9 3 26 11.1 1210.45 HUMAN 1 -13.078 -15.1862 QPSSTSESMDQLLNK-p Q99700;S814-p QPSSTSESMDQLLNK 0.212809275527928 0.0202467079324035 0.193 -0.338333333333333 12.9661984523881 23.1919983753719 0.193 -0.338333333333333 0.0505103240517352 0.0047951275345958 2.50497784541351 -4.59476119433235 Q99700 ATXN2 Q99700.S814.p_ATXN2 Q99700_S814s _1_1_814_814 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23683.23683.3 14.22 13.97 2.324 5 1 1 0 772.726 2236.1895 S814s TMT10 806 (R) LQPSSTSEsMDQLLNK (N) LQPS(0.0)S(0.0)T(0.0)S(0.0)ES(0.99)MDQLLNK K:TMT10,s:Phosphorylated S ATXN2 140907.9 1 21 176.1 481.52 HUMAN 1 12.9662 -23.192 QPTPAPGTPPQVDST-p Q9H7N4;T335-p QPTPAPGTPPQVDST 0.765856070253823 0.711454950834101 -0.086 0.054 2.22531111089087 2.03360063681902 -0.086 0.054 0.599058022995646 0.626094568660281 -0.558140203300251 0.516170048680245 Q9H7N4 SCAF1 Q9H7N4.T335.p_SCAF1 Q9H7N4_T335t _1_1_335_335 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27270.27270.5 17.17 14.59 4.834 11 1 1 0 1055.7008 5194.4926 T335t TMT10 297 (R) ISETLAGIYDDNSLSQDFPGDESPRPDAQPTQPTPAPGtPPQVDSTR (A) IS(0.0)ET(0.0)LAGIY(0.0)DDNS(0.0)LS(0.0)QDFPGDES(0.0)PRPDAQPT(0.0)QPT(0.0)PAPGT(0.99)PPQVDS(0.0)T(0.0)R t:Phosphorylated T SCAF1 139895 1 3 76.1 647.25 HUMAN 1 -2.2253 2.0336 QPTSIPGSPKFQPPV-p Q86UU1;S381-p QPTSIPGSPKFQPPV 0.305159632119897 0.00889906158414251 -0.201666666666667 -0.429 9.66123285868842 29.0505220779848 -0.201666666666667 -0.429 0.108112700150315 0.00124436501405464 -1.92291036468171 -6.13903669574759 Q86UU1 PHLDB1 Q86UU1.S381.p_PHLDB1 Q86UU1_S381s _1_1_381_381 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.36520.36520.4 24.17 24.17 3.232 8 1 1 0 915.7527 3580.0038 S381s TMT10 352 (R) LGGQLPVVAISLSEYPASGALSQPTSIPGsPK (F) LGGQLPVVAIS(0.0)LS(0.0)EY(0.0)PAS(0.0)GALS(0.0)QPT(0.0)S(0.0)IPGS(0.99)PK K:TMT10,s:Phosphorylated S PHLDB1 152129.1 3 4 99.1 600.41 HUMAN 1 -9.6612 -29.0505 QPVDNHVSPSSFLGQ-p Q12959-2;S432-p QPVDNHVSPSSFLGQ 0.246501837710711 0.111573159791238 -0.187 -0.188666666666667 11.6341863044078 12.573371388153 -0.187 -0.188666666666667 0.0686406471710305 0.0552920715299874 -2.26761240338755 -2.43318442281669 Q12959 DLG1 Q12959.2.S432.p_DLG1 Q12959-2_S432s_1_1_432_432 Q12959-2 Q12959-2|Q12959-7 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24308.24308.5 16.36 13.59 1.122 13 1 1 0 1052.5087 5177.5349 N421n S432s TMT10 402 (K) VAKPTSMYMNDGYAPPDITnSSSQPVDNHVsPSSFLGQTPASPAR (Y) VAKPT(0.0)S(0.0)MY(0.0)MN(0.0)DGY(0.0)APPDIT(0.0)N(0.99)S(0.0)S(0.0)S(0.0)QPVDN(0.0)HVS(0.99)PS(0.0)S(0.0)FLGQT(0.0)PAS(0.0)PAR K:TMT10,n:Deamidated,s:Phosphorylated S DLG1 103604.4 3 14 196.1 460.79 HUMAN 1 -11.6342 -12.5734 QPVRLLSSESEDEEE-p Q96AY2-2;S85-p QPVRLLSSESEDEEE 0.283283360364086 0.00352761570401347 0.159 0.753 10.3500471026496 36.6440969342975 0.159 0.753 0.0922561421196858 0.000216566015675105 2.04259667018038 8.71962756584423 Q96AY2 EME1 Q96AY2.2.S85.p_EME1 Q96AY2-2_S85s _1_1_85_85 Q96AY2-2 Q96AY2-2|D6RIT8 Isoform 2 of Crossover junction endonuclease EME1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28958.28958.2 7.63 7.63 1.163 3 1 1 0 1201.0679 2321.171 S85s TMT10 82 (R) LLSsESEDEEEFIPLAQR (L) LLS(0.0)S(0.99)ES(0.0)EDEEEFIPLAQR s:Phosphorylated S EME1 65747.5 1 3 1591.1 129.29 HUMAN 1 10.35 36.6441 QPVSAPPSPRDISME-p Q16204;S244-p QPVSAPPSPRDISME 0.892526264868545 0.187626308635375 0.029 -0.190666666666667 0.966208829357742 9.55918895519391 0.029 -0.190666666666667 0.800532774602259 0.11068304652322 0.265380657045062 -1.90448522016857 Q16204 CCDC6 Q16204.S244.p_CCDC6 Q16204_S244s _1_1_244_244 Q16204 Q16204 Coiled-coil domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25837.25837.4 22.88 22.88 1.658 4 1 1 0 806.1272 3141.5216 S244s TMT10 235 (K) LDQPVSAPPsPRDISMEIDSPENMMR (H) LDQPVS(0.0)APPS(0.99)PRDIS(0.0)MEIDS(0.0)PENMMR s:Phosphorylated S CCDC6 53461.2 20 5 423.1 319.68 HUMAN 1 0.9662 -9.5592 QPVVASVSLLIFKDL-p Q9BV79;S298-p QPVVASVSLLIFKDL 0.39901938589383 0.013271733212951 -0.114333333333333 0.611 7.36080061370116 26.1143670733813 -0.114333333333333 0.611 0.183619981216705 0.00244660180984176 -1.52403328682055 5.32462696606822 Q9BV79 MECR Q9BV79.S298.p_MECR Q9BV79_S298s _1_1_298_298 Q9BV79 Q9BV79|Q9BV79-2 Enoyl-[acyl-carrier-protein] reductase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.34536.34536.3 13.44 12.94 2.33 2 1 1 0 647.0524 1859.177 S298s TMT10 291 (K) QPVVASVsLLIFK (D) QPVVAS(0.0)VS(0.99)LLIFK K:TMT10,s:Phosphorylated S MECR 40803.4 1 1 6174.1 13.44 HUMAN 1 -7.3608 26.1144 QPYLSPGTPQLEFSA-p Q8IVT2;T433-p QPYLSPGTPQLEFSA 0.446464578411753 0.304953925483462 0.130333333333333 -0.101333333333333 6.46069331833663 6.81184933544494 0.130333333333333 -0.101333333333333 0.225907509715667 0.208360344326322 1.3662392892047 -1.42765269879904 Q8IVT2 MISP Q8IVT2.T433.p_MISP Q8IVT2_T433t _1_1_433_433 Q8IVT2 Q8IVT2 Mitotic interactor and substrate of PLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32300.32300.4 12.15 12.15 1.214 9 1 1 0 1102.8118 4328.2531 T433t Hydrogen 420 (R) IPPDAYQPYLSPGtPQLEFSAFGAFGKPSSLSTAEAK (A) IPPDAY(0.0)QPY(0.0)LS(0.0)PGT(0.99)PQLEFS(0.0)AFGAFGKPS(0.0)S(0.0)LS(0.0)T(0.0)AEAK K:TMT10-Lys-Only,t:Phosphorylated T MISP 75526.3 1 13 490.1 294.31 HUMAN 1 6.4607 -6.8118 QPYNAIFSPKGKEQK-p I6L8A6;S894-p QPYNAIFSPKGKEQK 0.623139860687409 0.0346773811454659 -0.074 -0.303333333333333 3.81650322321334 19.6647573979399 -0.074 -0.303333333333333 0.41528828265519 0.0108024996324352 -0.881887429338041 -3.80388668042585 I6L8A6 NotFound I6L8A6.S894.p_NotFound I6L8A6_S894s _1_1_894_894 I6L8A6 Q99708-2|I6L8A6|J3QLH2 DNA endonuclease RBBP8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21098.21098.3 12.38 12.38 11.707 2 1 1 0 568.3057 1622.9307 S894s TMT10 887 (R) QPYNAIFsPK (G) QPY(0.0)NAIFS(0.99)PK K:TMT10,s:Phosphorylated S RBBP8 103921.2 3 14 258.1 398.22 HUMAN 1 -3.8165 -19.6648 QQAAGMLSPKTGGKE-p E7ETY2;S1257-p QQAAGMLSPKTGGKE 0.204121902978147 0.0558278434479406 -0.268666666666667 -0.265333333333333 13.3640253524879 16.6948377427121 -0.268666666666667 -0.265333333333333 0.0460890190468445 0.0214050489694068 -2.57687393794909 -3.20038562387191 E7ETY2 TCOF1 E7ETY2.S1257.p_TCOF1 E7ETY2_S1257s _1_1_1257_1257 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13145.13145.5 21.47 15.02 99 1 1 1 0 642.3432 3127.7228 S1257s TMT10 1239 (K) DDPDGKQEAKPQQAAGMLsPK (T) DDPDGKQEAKPQQAAGMLS(1.0)PK K:TMT10,s:Phosphorylated S TCOF1 152529.5 12 30 19.1 1034.65 HUMAN 1 -13.364 -16.6948 QQAIDSHSVKNFREE-p O75410;S131-p QQAIDSHSVKNFREE 0.501862932993742 0.120680138691691 -0.127666666666667 -0.402333333333333 5.52161121110944 12.1099359569961 -0.127666666666667 -0.402333333333333 0.280439302895014 0.0615185944449667 -1.19884565613463 -2.35066389406174 O75410 TACC1 O75410.S131.p_TACC1 O75410_S131s _1_1_131_131 O75410 O75410-2|O75410-7|R4GMT7 Transforming acidic coiled-coil-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10548.10548.4 21.22 14.74 2.166 5 1 1 0 777.8962 3028.5977 S131s TMT10 113 (K) TCSKPSENEVPQQAIDSHsVK (N) T(0.0)CS(0.0)KPS(0.0)ENEVPQQAIDS(0.0)HS(0.99)VK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TACC1 88648.6 1 6 442.1 311.73 HUMAN 1 -5.5216 -12.1099 QQALREESGAGDKG_-p A0A1C7CYX1;S1093-p QQALREESGAGDKG_ 0.12125673604171 0.177689857798884 0.285666666666667 0.277 19.0607678196323 9.86934919947268 0.285666666666667 0.277 0.0124143280658862 0.103054053780234 3.68021728707806 1.95824037777041 A0A1C7CYX1 NotFound A0A1C7CYX1.S1093.p_NotFound A0A1C7CYX1_S1093s _1_1_1093_1093 A0A1C7CYX1 A0A1C7CYX1 ELM2 and SANT domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9977.9977.4 18.41 18.41 99 1 1 1 0 705.3547 2738.4222 S1093s TMT10 1076 (K) EAAAAAAAAHQQALREEsGAGDKG (-) EAAAAAAAAHQQALREES(1.0)GAGDKG K:TMT10,s:Phosphorylated S ELMSAN1 121244.8 1 12 548.1 275.48 HUMAN 1 19.0608 9.8693 QQDKSDESDSSLSEV-p Q7Z4S6;S1307-p QQDKSDESDSSLSEV 0.893317056675265 0.0497121111153576 0.0203333333333333 -0.309333333333333 0.957610528013505 17.4317036095422 0.0203333333333333 -0.309333333333333 0.802119265020587 0.0180646536376613 0.263211412685387 -3.34552161717792 Q7Z4S6 KIF21A Q7Z4S6.S1307.p_KIF21A Q7Z4S6_S1304sS1307s_2_2_1304_1307 Q7Z4S6 Q7Z4S6|Q7Z4S6-2 Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13432.13432.4 12.11 12.11 1.182 9 2 2 0 888.664 3391.6978 S1304s S1307s TMT10 1290 (R) LTVSQGNTSVQQDKsDEsDSSLSEVHR (S) LT(0.0)VS(0.0)QGNT(0.0)S(0.0)VQQDKS(0.99)DES(0.99)DS(0.0)S(0.0)LS(0.0)EVHR K:TMT10,s:Phosphorylated S KIF21A 188488.1 2 3 390.2 332.37 HUMAN 1 0.9576 -17.4317 QQDLHLESPQRQPEY-p Q9H6F5;S102-p QQDLHLESPQRQPEY 0.897783336973234 0.880448169638418 -0.03 0.024 0.918884351999751 0.777016399931393 -0.03 0.024 0.809303772455913 0.836177274157438 -0.253405799419452 0.2169496472556 Q9H6F5 CCDC86 Q9H6F5.S102.p_CCDC86 Q9H6F5_S102s _1_1_102_102 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10589.10659.4 17.56 17.56 5.09 4 1 1 0 708.3402 2750.3695 S102s TMT10 95 (R) QQDLHLEsPQRQPEYSPESPR (C) QQDLHLES(0.99)PQRQPEY(0.0)S(0.0)PES(0.0)PR s:Phosphorylated S CCDC86 40349 4 10 346.1 352.36 HUMAN 1 -0.9189 0.777 QQDPREKTPPRPQGQ-p A9X3U0;T106-p QQDPREKTPPRPQGQ 0.670351681163833 0.110978532291389 0.072 -0.258 3.25317509907659 12.603513934588 0.072 -0.258 0.472805467531915 0.0549096412839619 0.771382197891635 -2.43857220429982 A9X3U0 NotFound A9X3U0.T106.p_NotFound A9X3U0_T106t _1_1_106_106 A9X3U0 Q96GF1|A9X3U0 BSK65-TEST2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4005.4005.4 9.81 6.02 99 1 1 1 0 582.0472 2245.1999 T106t Hydrogen 104 (R) EKtPPRPQGQRPEPENR (G) EKT(1.0)PPRPQGQRPEPENR K:TMT10-Lys-Only,t:Phosphorylated T RNF185 17185 3 1 5791.1 16.25 HUMAN 1 3.2532 -12.6035 QQDVEMMSDEDL___-p Q96PZ2;S607-p QQDVEMMSDEDL___ 0.855349885811891 0.459015657545431 0.0266666666666667 -0.0736666666666667 1.31900185913931 4.50821892900323 0.0266666666666667 -0.0736666666666667 0.738073842463431 0.354142547556484 0.352087566431371 -1.01292441081589 Q96PZ2 FAM111A Q96PZ2.S607.p_FAM111A Q96PZ2_S607s_1_1_607_607 Q96PZ2 Q96PZ2 Protein FAM111A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25458.25458.4 21.44 19.8 21.435 2 1 1 0 860.389 3326.575 M605m M606m S607s TMT10 589 (R) HKPWYEEVFVNQQDVEmmsDEDL (-) HKPWY(0.0)EEVFVNQQDVEM(1.0)M(1.0)S(0.99)DEDL K:TMT10,m:Oxidized methionine,s:Phosphorylated S FAM111A 71050.8 16 5 2239.1 92.18 HUMAN 1 1.319 -4.5082 QQEGGFASPRTGKGK-p A0A087WTW0;S703-p QQEGGFASPRTGKGK 0.307906327955743 0.115480981947455 -0.19 -0.389 9.56108958996057 12.3683945009 -0.19 -0.389 0.110634618088292 0.057964293912672 -1.90554691836992 -2.39661390251579 A0A087WTW0 NotFound A0A087WTW0.S703.p_NotFound A0A087WTW0_S703s _1_1_703_703 A0A087WTW0 A0A087WTW0|Q96T88-2|A0A087WVR3 E3 ubiquitin-protein ligase UHRF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6167.6167.4 16.37 12.84 14.604 2 1 1 0 687.0771 2665.3218 S703s TMT10 687 (K) ENSKREEEEQQEGGFAsPR (T) ENS(0.0)KREEEEQQEGGFAS(0.99)PR K:TMT10,s:Phosphorylated S UHRF1 98273.4 4 3 1511.1 134.77 HUMAN 1 -9.5611 -12.3684 QQEHEEDSGSDLDHD-p Q13796;S1425-p QQEHEEDSGSDLDHD 0.93707060991058 0.143220511057626 -0.013 0.18 0.547938750891033 11.1203737482954 -0.013 0.18 0.881467135803869 0.0772614092050637 -0.156293668670681 2.17621779166171 Q13796 SHROOM2 Q13796.S1425.p_SHROOM2 Q13796_S1425sS1427s_2_2_1425_1427 Q13796 Q13796|F5H3B6 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16254.16254.4 15.36 15.36 6.616 3 2 2 0 818.6096 3111.4755 S1425s S1427s TMT10 1414 (K) DLQEQQEHEEDsGsDLDHDLSVK (K) DLQEQQEHEEDS(0.99)GS(0.99)DLDHDLS(0.0)VK K:TMT10,s:Phosphorylated S SHROOM2 177605.1 2 33 90.1 622.62 HUMAN 1 -0.5479 11.1204 QQEQKLQSPLPGESA-p Q2KHR2;S225-p QQEQKLQSPLPGESA 0.645166976093224 0.017885461658111 -0.0823333333333333 -0.335666666666667 3.56254798973695 24.0675468804142 -0.0823333333333333 -0.335666666666667 0.440296467397454 0.00391963215662793 -0.832528684391116 -4.80571732577145 Q2KHR2 RFX7 Q2KHR2.S225.p_RFX7 Q2KHR2_S225s _1_1_225_225 Q2KHR2 Q2KHR2|Q2KHR2-2|H0YLX2 DNA-binding protein RFX7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12753.12753.3 14.61 10.77 5.911 2 1 1 0 869.4761 2526.4495 S225s TMT10 218 (K) QQEQKLQsPLPGESAAK (K) QQEQKLQS(0.99)PLPGES(0.0)AAK K:TMT10,s:Phosphorylated S RFX7 147863 2 2 511.1 287.25 HUMAN 1 -3.5625 -24.0675 QQESCSSTPGLEEPL-p Q14789-2;T1265-p QQESCSSTPGLEEPL 0.201344466647756 0.450935257537981 0.213 0.0846666666666667 13.5167391508623 4.6107260522529 0.213 0.0846666666666667 0.0444965239000596 0.345881548615528 2.60461081365687 1.03201775396905 Q14789 GOLGB1 Q14789.2.T1265.p_GOLGB1 Q14789-2_S1264sT1265t_2_2_1264_1265 Q14789-2 Q14789-2 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26383.26449.4 21.51 21.51 1.104 7 2 2 0 982.4738 3766.93 S1264s T1265t TMT10 1247 (R) ESIDGKLPSTDQQESCSstPGLEEPLFK (A) ES(0.0)IDGKLPS(0.0)T(0.0)DQQES(0.0)CS(0.0)S(0.99)T(0.99)PGLEEPLFK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T GOLGB1 378557.2 1 31 93.1 610.98 HUMAN 1 13.5167 4.6107 QQFDDGGSDEEDIWE-p Q5H9R7-5;S617-p QQFDDGGSDEEDIWE 0.396926015285751 0.360700674649357 -0.144 -0.109 7.40781827624353 5.87631263331791 -0.144 -0.109 0.181642793518199 0.258445358335261 -1.53222756270665 -1.26220372467068 Q5H9R7 PPP6R3 Q5H9R7.5.S617.p_PPP6R3 Q5H9R7-5_S617s _1_1_617_617 Q5H9R7-5 Q5H9R7-5|Q5H9R7-2|Q5H9R7-6|E9PKF6|H7BXH2|Q5H9R7-4|Q5H9R7-3|E9PQP7 Isoform 5 of Serine/threonine-protein phosphatase 6 regulatory subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25473.25473.2 19.54 18.18 99 1 1 1 0 1339.6004 2598.2248 S617s TMT10 609 (R) IQQFDDGGsDEEDIWEEK (H) IQQFDDGGS(1.0)DEEDIWEEK K:TMT10,s:Phosphorylated S PPP6R3 99453.3 7 3 896.1 204.08 HUMAN 1 -7.4078 -5.8763 QQGAGLESPQGQPEP-p Q9H6F5;S80-p QQGAGLESPQGQPEP 0.434272682849394 0.498877165793745 0.127666666666667 0.072 6.67361125218413 4.04034187862974 0.127666666666667 0.072 0.215099239437171 0.394426251435747 1.40375071175939 0.924675392083709 Q9H6F5 CCDC86 Q9H6F5.S80.p_CCDC86 Q9H6F5_S80s _1_1_80_80 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12619.12619.3 18.03 18.03 18.027 2 1 1 0 871.4258 2532.3004 S80s TMT10 72 (R) LQQGAGLEsPQGQPEPGAASPQR (Q) LQQGAGLES(0.99)PQGQPEPGAAS(0.0)PQR s:Phosphorylated S CCDC86 40349 1 8 346.1 352.36 HUMAN 1 6.6736 4.0403 QQGEDSGSDPEDTY_-p P18858;S913-p QQGEDSGSDPEDTY_ 0.79813572883131 0.150520799459211 -0.0486666666666667 0.204666666666667 1.88656280429296 10.8177634053558 -0.0486666666666667 0.204666666666667 0.647654995337024 0.0828368659556619 -0.483531389523941 2.12327371332004 P18858 LIG1 P18858.S913.p_LIG1 P18858_S911sS913s_2_2_911_913 P18858 P18858 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12513.12513.2 13.51 13.51 2.49 5 2 2 0 1308.0053 2455.0695 S911s S913s TMT10 900 (K) QSQIQNQQGEDsGsDPEDTY (-) QS(0.0)QIQNQQGEDS(0.99)GS(0.99)DPEDT(0.0)Y(0.0) s:Phosphorylated S LIG1 102361.8 3 21 302.1 376.44 HUMAN 1 -1.8866 10.8178 QQGHEPVSPRSLQRS-p Q9BTA9;S511-p QQGHEPVSPRSLQRS 0.112881512001172 0.258507126544532 0.373666666666667 -0.143333333333333 19.7789701434225 7.73998661131188 0.373666666666667 -0.143333333333333 0.0105221135853045 0.168267924852596 3.83167473462314 -1.58953354387707 Q9BTA9 WAC Q9BTA9.S511.p_WAC Q9BTA9_S511s_1_1_511_511 Q9BTA9 Q9BTA9|Q9BTA9-2|Q9BTA9-5|A0A0A0MRT2 WW domain-containing adapter protein with coiled-coil HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3475.3475.2 15.92 15.92 99 1 1 1 0 599.2571 1134.565 Q504q S511s Hydrogen 504 (K) qQGHEPVsPR (S) Q(1.0)QGHEPVS(1.0)PR q:Pyroglutamic acid,s:Phosphorylated S WAC 71065.3 5 10 918.1 200.44 HUMAN 1 19.779 -7.74 QQGPVVVSPASDYKD-p O75391;S158-p QQGPVVVSPASDYKD 0.820904102287946 0.0268508179912691 0.0576666666666667 -0.508 1.64841558637792 21.3276097801385 0.0576666666666667 -0.508 0.684161200674643 0.00736612394183885 0.429452376340166 -4.16560867179619 O75391 SPAG7 O75391.S158.p_SPAG7 O75391_S158s _1_1_158_158 O75391 O75391|I3L4C3 Sperm-associated antigen 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15916.15916.3 23.66 23.66 4.42 3 1 1 0 1089.8811 3187.6635 S158s TMT10 140 (K) ELAQRQEEEAAQQGPVVVsPASDYK (D) ELAQRQEEEAAQQGPVVVS(0.99)PAS(0.0)DY(0.0)K K:TMT10,s:Phosphorylated S SPAG7 26148.1 5 3 1832.1 112.27 HUMAN 1 1.6484 -21.3276 QQHSIYISPHKNGSG-p P28749;S988-p QQHSIYISPHKNGSG 0.621295713198345 0.00327770596929341 -0.077 -1.03566666666667 3.84403222162328 37.2220590615704 -0.077 -1.03566666666667 0.412664184630978 0.000189580687488051 -0.887196332865235 -8.94939363615586 P28749 RBL1 P28749.S988.p_RBL1 P28749_S988s _1_1_988_988 P28749 P28749|P28749-2 Retinoblastoma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12141.12141.4 15.2 15.2 1.52 4 1 1 0 519.783 1996.138 S988s TMT10 979 (R) ISQQHSIYIsPHK (N) IS(0.0)QQHS(0.0)IY(0.0)IS(0.99)PHK K:TMT10,s:Phosphorylated S RBL1 122214.1 3 11 566.1 270.71 HUMAN 1 -3.844 -37.2221 QQIENIRSPEGSRKN-p P02452;S1247-p QQIENIRSPEGSRKN 0.347879336040844 0.278708257684792 0.165333333333333 -0.106 8.51926469880866 7.30950459669418 0.165333333333333 -0.106 0.140628560128479 0.185801638846921 1.72514235668442 -1.51465178442479 P02452 COL1A1 P02452.S1247.p_COL1A1 P02452_S1247s _1_1_1247_1247 P02452 P02452 Collagen alpha-1(I) chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13565.13565.3 11.25 11.25 1.444 4 1 1 0 704.0225 2030.0828 S1247s TMT10 1237 (K) SLSQQIENIRsPEGSR (K) S(0.0)LS(0.0)QQIENIRS(0.99)PEGS(0.0)R s:Phosphorylated S COL1A1 139966 1 2 5274.1 21.07 HUMAN 1 8.5193 -7.3095 QQILKEHSPDEFIKD-p Q13287;S16-p QQILKEHSPDEFIKD 0.544947039505364 0.514614821004008 0.0826666666666667 0.0806666666666667 4.86767345020936 3.87152670312322 0.0826666666666667 0.0806666666666667 0.326011301055618 0.410059926662106 1.07975185334019 0.892343177680503 Q13287 NMI Q13287.S16.p_NMI Q13287_S16s _1_1_16_16 Q13287 Q13287 N-myc-interactor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12542.12542.3 16.57 16.57 99 1 1 1 0 828.4177 2403.2759 S16s TMT10 14 (K) EHsPDEFIKDEQNK (G) EHS(1.0)PDEFIKDEQNK K:TMT10,s:Phosphorylated S NMI 35227.3 4 1 4531.1 30.26 HUMAN 1 4.8677 3.8715 QQKAALSSQQQQQLA-p Q6Y7W6-5;S644-p QQKAALSSQQQQQLA 0.192059131883792 0.52906403601265 -0.723333333333333 -0.123333333333333 13.9911611408368 3.71776366735611 -0.723333333333333 -0.123333333333333 0.0398918232303902 0.424838271565722 -2.69129579946162 -0.86264149453009 Q6Y7W6 GIGYF2 Q6Y7W6.5.S644.p_GIGYF2 Q6Y7W6-5_S644s _1_1_644_644 Q6Y7W6-5 Q6Y7W6-3|Q6Y7W6-5|Q6Y7W6-4|I1E4Y6 Isoform 4 of GRB10-interacting GYF protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.37197.37197.2 16.82 16.82 1.199 3 1 1 0 1512.3378 2943.7032 S644s TMT10 640 (K) AALSsQQQQQLALLLQQFQTLK (M) AALS(0.0)S(0.99)QQQQQLALLLQQFQT(0.0)LK K:TMT10,s:Phosphorylated S GIGYF2 149826.1 3 12 470.1 302.35 HUMAN 1 -13.9912 -3.7178 QQKAEASSPVPYLSP-p G3V1L9;S927-p QQKAEASSPVPYLSP 0.81888464545651 0.22101866054034 0.0666666666666667 0.224333333333333 1.67174324353523 8.6324478339791 0.0666666666666667 0.224333333333333 0.680496154983647 0.137010930747744 0.434814386077234 1.7441386082035 G3V1L9 TJP1 G3V1L9.S927.p_TJP1 G3V1L9_S927s _1_1_927_927 G3V1L9 G3V1L9 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19977.19977.3 21.07 21.07 1.157 10 1 1 0 1244.9357 3652.8404 S927s TMT10 923 (K) AEASsPVPYLSPETNPASSTSAVNHNVNLTNVR (L) AEAS(0.0)S(0.99)PVPY(0.0)LS(0.0)PET(0.0)NPAS(0.0)S(0.0)T(0.0)S(0.0)AVNHNVNLT(0.0)NVR s:Phosphorylated S TJP1 197797.8 2 53 41.2 827.72 HUMAN 1 1.6717 8.6324 QQKFRSETITEEELV-p P16152;T162-p QQKFRSETITEEELV 0.946419240032307 0.0130005269301017 -0.01 0.470666666666667 0.47171700117898 26.2639269746099 -0.01 0.470666666666667 0.897074062445736 0.00236378135409774 -0.135553682533513 5.36403893644681 P16152 CBR1 P16152.T162.p_CBR1 P16152_T162t _1_1_162_162 P16152 P16152 Carbonyl reductase [NADPH] 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28941.28941.3 12.59 9.13 1.385 3 1 1 0 667.9936 1921.999 T162t Hydrogen 160 (R) SEtITEEELVGLMNK (F) S(0.0)ET(0.99)IT(0.0)EEELVGLMNK K:TMT10-Lys-Only,t:Phosphorylated T CBR1 30659.7 6 3 3096.1 60.75 HUMAN 1 -0.4717 26.2639 QQKNLEGYVGFANLP-p E7EPK1;Y30-p QQKNLEGYVGFANLP 0.838361155272063 0.129980634334798 -0.0656666666666667 0.385666666666667 1.48133278886905 11.6786740592331 -0.0656666666666667 0.385666666666667 0.710995285685749 0.0679411031355889 -0.39060863756529 2.27436733329631 E7EPK1 NotFound E7EPK1.Y30.p_NotFound E7EPK1_Y30y _1_1_30_30 E7EPK1 Q16181|E7EPK1|Q16181-2 Septin-7 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.28378.28378.3 17.55 17.55 17.552 2 1 1 0 874.13 2540.4026 Y30y TMT10 26 (K) NLEGyVGFANLPNQVYRK (S) NLEGY(0.99)VGFANLPNQVY(0.0)RK K:TMT10,y:Phosphorylated Y SEPT7 50979.3 1 1 203.1 17.55 HUMAN 1 -1.4813 11.6787 QQKQSRISPIQKPQG-p P51531;S329-p QQKQSRISPIQKPQG 0.614665945659428 0.324475377605544 -0.067 0.095 3.92258519229821 6.46551511693731 -0.067 0.095 0.405267223242911 0.225656832792303 -0.902302498731402 1.36674115568014 P51531 SMARCA2 P51531.S329.p_SMARCA2 P51531_S329s _1_1_329_329 P51531 P51531|P51531-2|F6VDE0|A0A0U1RQZ9 Probable global transcription activator SNF2L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28953.28953.4 17.03 17.03 99 1 1 1 0 675.3806 2618.5282 S329s TMT10 328 (R) IsPIQKPQGLDPVEILQER (E) IS(1.0)PIQKPQGLDPVEILQER K:TMT10,s:Phosphorylated S SMARCA2 181903.8 8 20 392.2 331.85 HUMAN 1 -3.9226 6.4655 QQKRKDTSPDLEKSC-p Q86VG3;S213-p QQKRKDTSPDLEKSC 0.247049795569645 0.111853170676308 -0.229666666666667 -0.233666666666667 11.5940996009958 12.5570185400743 -0.229666666666667 -0.233666666666667 0.0692771543085819 0.055500659784994 -2.26053907910709 -2.43026254233643 Q86VG3 C11orf74 Q86VG3.S213.p_C11orf74 Q86VG3_S213s _1_1_213_213 Q86VG3 Q86VG3|Q86VG3-2 Uncharacterized protein C11orf74 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7295.7295.4 7.89 7.89 1.1 2 1 1 0 489.7744 1876.1107 S213s TMT10 209 (K) RKDTsPDLEK (S) RKDT(0.0)S(0.99)PDLEK K:TMT10,s:Phosphorylated S C11orf74 25749.2 1 2 3785.1 43.1 HUMAN 1 -11.5941 -12.557 QQKTSALSPNAKEFI-p P50616;S268-p QQKTSALSPNAKEFI 0.653603237035686 0.169266790345308 0.0693333333333333 -0.263 3.46356584432008 10.143036561175 0.0693333333333333 -0.263 0.450446706191558 0.0967601078772798 0.813092680505263 -2.00574790445816 P50616 TOB1 P50616.S268.p_TOB1 P50616_S268s _1_1_268_268 P50616 P50616 Protein Tob1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9946.9946.2 11.53 11.53 2.742 3 1 1 0 713.8874 1346.8044 S268s TMT10 264 (K) TSALsPNAK (E) T(0.0)S(0.0)ALS(0.99)PNAK K:TMT10,s:Phosphorylated S TOB1 38268.4 1 2 2607.1 76.83 HUMAN 1 3.4636 -10.143 QQLEPKKSTSPKKAA-p Q8IYB5;S205-p QQLEPKKSTSPKKAA 0.870861616619807 0.00112568182952083 0.0513333333333333 -1.63833333333333 1.1768154758878 49.0337886555012 0.0513333333333334 -1.63833333333333 0.762638019882869 1.24916881714135e-05 0.317660998670926 -15.0491131651968 Q8IYB5 SMAP1 Q8IYB5.S205.p_SMAP1 Q8IYB5_S205s _1_1_205_205 Q8IYB5 Q8IYB5|A0A087X1X9|Q8IYB5-2|Q8IYB5-3 Stromal membrane-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8151.8151.4 9.26 9.26 9.263 3 1 1 0 710.6724 2759.7004 S205s TMT10 197 (K) DQQLEPKKsTSPKK (A) DQQLEPKKS(0.99)T(0.0)S(0.0)PKK K:TMT10,s:Phosphorylated S SMAP1 50728 5 2 3784.1 43.11 HUMAN 1 1.1768 -49.0338 QQLFPDGSPGDQWVK-p Q8IU60;S284-p QQLFPDGSPGDQWVK 0.540995058602262 0.00262293931700471 0.0806666666666667 -0.685333333333333 4.92230210357439 39.2898699355896 0.0806666666666667 -0.685333333333333 0.321936182301554 0.000117764124150753 1.08980013034804 -9.8164950613354 Q8IU60 DCP2 Q8IU60.S284.p_DCP2 Q8IU60_S284s _1_1_284_284 Q8IU60 Q8IU60|Q8IU60-2 m7GpppN-mRNA hydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20814.20814.3 22.98 23.05 13.003 2 1 1 0 822.0751 2384.2399 S284s TMT10 275 (R) HSQQLFPDGsPGDQWVK (H) HS(0.0)QQLFPDGS(0.99)PGDQWVK K:TMT10,s:Phosphorylated S DCP2 49026.8 8 3 1279.1 158.9 HUMAN 1 4.9223 -39.2899 QQLMAKGSDKRRGGP-p Q04637-9;S1035-p QQLMAKGSDKRRGGP 0.332895452588847 0.00504553803227928 -0.412333333333333 -0.594333333333333 8.91703995623121 33.4820054564866 -0.412333333333333 -0.594333333333333 0.128320488538127 0.00044853821907591 -1.79400203112539 -7.55175159169423 Q04637 EIF4G1 Q04637.9.S1035.p_EIF4G1 Q04637-9_S1035s _1_1_1035_1035 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1|Q04637-4|E7EX73|Q04637-5|Q04637-7|Q04637-6 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15753.15753.3 10.57 7.2 99 1 1 1 0 658.0357 1892.1242 S1035s TMT10 1027 (K) VQQLMAKGsDK (R) VQQLMAKGS(1.0)DK K:TMT10,s:Phosphorylated S EIF4G1 176975.4 2 14 107.1 585.61 HUMAN 1 -8.917 -33.482 QQLNGLISPELRHLR-p Q147X3;S89-p QQLNGLISPELRHLR 0.278257140485788 0.334957708037581 0.156333333333333 -0.095 10.5098418322207 6.29558398361006 0.156333333333333 -0.095 0.0889233502687399 0.234661369890742 2.07044363305156 -1.33672046652761 Q147X3 NAA30 Q147X3.S89.p_NAA30 Q147X3_S89s _1_1_89_89 Q147X3 Q147X3 N-alpha-acetyltransferase 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21745.21745.3 19.8 19.8 99 1 1 1 0 881.1065 2561.3343 S89s TMT10 74 (R) CPQPPQEQQQLNGLIsPELR (H) CPQPPQEQQQLNGLIS(1.0)PELR C:Carbamidomethylation,s:Phosphorylated S NAA30 39889.4 6 3 1035.1 185.79 HUMAN 1 10.5098 -6.2956 QQLPPPLSPPSPSTP-p Q6WCQ1-2;S289-p QQLPPPLSPPSPSTP 0.244065722861738 0.461430269505558 0.261 -0.092 11.716999267719 4.47958057132424 0.261 -0.092 0.0673441806240378 0.356485560077455 2.28223642125026 -1.00757557310015 Q6WCQ1 MPRIP Q6WCQ1.2.S289.p_MPRIP Q6WCQ1-2_S289sS292s_2_2_289_292 Q6WCQ1-2 Q6WCQ1-2|Q6WCQ1-3 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16885.16885.5 20.03 10.7 1.116 5 2 2 0 768.8003 3680.0375 S289s S292s TMT10 273 (K) TKQDLKAEEQQLPPPLsPPsPSTPNHR (R) T(0.0)KQDLKAEEQQLPPPLS(0.99)PPS(0.99)PS(0.0)T(0.0)PNHR K:TMT10,s:Phosphorylated S MPRIP 118899.7 6 20 204.1 449.03 HUMAN 1 11.717 -4.4796 QQLRLEASIERIKVS-p Q9UBI6;S26-p QQLRLEASIERIKVS 0.456411337786712 0.857613370752798 -0.100333333333333 -0.0246666666666666 6.2810356617228 0.93907042290252 -0.100333333333333 -0.0246666666666666 0.235448774242928 0.80555084529664 -1.3344772319782 -0.258499014305142 Q9UBI6 GNG12 Q9UBI6.S26.p_GNG12 Q9UBI6_S26s _1_1_26_26 Q9UBI6 Q9UBI6 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11307.11307.2 10 3.28 99 1 1 1 0 563.7892 1046.6043 S26s TMT10 23 (R) LEAsIER (I) LEAS(1.0)IER s:Phosphorylated S GNG12 8120.2 2 1 3339.1 53.43 HUMAN 1 -6.281 -0.9391 QQLTEEASLDEASGF-p Q96K21;S376-p QQLTEEASLDEASGF 0.961267893579624 0.541054631537599 -0.0126666666666667 0.125 0.328882574719921 3.58887687985744 -0.0126666666666667 0.125 0.927068324296561 0.437635266493186 -0.0958778156995587 0.837547866850983 Q96K21 ZFYVE19 Q96K21.S376.p_ZFYVE19 Q96K21_S376s _1_1_376_376 Q96K21 Q96K21|Q96K21-2|H3BRF9|Q96K21-3 Abscission/NoCut checkpoint regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29858.29858.4 28.25 28.25 5.933 5 1 1 0 970.2308 3797.9296 S376s TMT10 367 (R) VLQQLTEEAsLDEASGFNIPAEQASRPWTQPR (G) VLQQLT(0.0)EEAS(0.99)LDEAS(0.0)GFNIPAEQAS(0.0)RPWT(0.0)QPR s:Phosphorylated S ZFYVE19 52458.3 1 5 971.1 193.47 HUMAN 1 -0.3289 3.5889 QQNSGRMSPMGTASG-p O76080;S48-p QQNSGRMSPMGTASG 0.140132708968999 0.206136847606035 0.252666666666667 0.127 17.4628954179911 9.02465246216331 0.252666666666667 0.127 0.0179353748633498 0.125179944245173 3.35436955189502 1.81197674039703 O76080 ZFAND5 O76080.S48.p_ZFAND5 O76080_S48s _1_1_48_48 O76080 O76080 AN1-type zinc finger protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11411.11411.2 18.29 14.19 2.305 9 1 1 0 1232.542 2384.102 S48s TMT10 47 (R) MsPMGTASGSNSPTSDSASVQR (A) MS(0.99)PMGT(0.0)AS(0.0)GS(0.0)NS(0.0)PT(0.0)S(0.0)DS(0.0)AS(0.0)VQR s:Phosphorylated S ZFAND5 23759.3 9 1 4256.1 34.6 HUMAN 1 17.4629 9.0247 QQPDTKDSPVCPHFT-p P50851;S979-p QQPDTKDSPVCPHFT 0.207163605124651 0.144894526954526 0.191333333333333 0.168666666666667 13.2179915831903 11.0497731575212 0.191333333333333 0.168666666666667 0.0476651365680055 0.0785276650431652 2.55042305141398 2.16385083459794 P50851 LRBA P50851.S979.p_LRBA P50851_S979s _1_1_979_979 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17430.17430.4 27.74 22.25 1.635 8 1 1 0 1118.0444 4389.1872 S979s TMT10 964 (R) DINVSVGSQQPDTKDsPVCPHFTTNGNENSSIEK (T) DINVS(0.0)VGS(0.0)QQPDT(0.0)KDS(0.99)PVCPHFT(0.0)T(0.0)NGNENS(0.0)S(0.0)IEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S LRBA 321783.7 7 3 74.1 649.16 HUMAN 1 13.218 11.0498 QQPMKPISPVKDPVS-p Q12888-2;S1099-p QQPMKPISPVKDPVS 0.890771178410925 0.396835471404953 -0.0216666666666667 -0.101 0.982420388050327 5.33735027322225 -0.0216666666666667 -0.101 0.79755007680875 0.292593701231077 -0.269462935145171 -1.16528646950279 Q12888 TP53BP1 Q12888.2.S1099.p_TP53BP1 Q12888-2_S1099s _1_1_1099_1099 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15194.15194.3 19.6 19.6 5.575 4 1 1 0 1125.2952 3293.9061 S1099s TMT10 1090 (R) QSQQPMKPIsPVKDPVSPASQK (M) QS(0.0)QQPMKPIS(0.99)PVKDPVS(0.0)PAS(0.0)QK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 11 48 3.1 2297.07 HUMAN 1 -0.9824 -5.3374 QQPPQQPTPPKLAQA-p Q6VY07-2;T46-p QQPPQQPTPPKLAQA 0.373935912464191 0.696012785415873 -0.161666666666667 -0.0396666666666666 7.90967848569708 2.16304784512602 -0.161666666666667 -0.0396666666666666 0.161819983081439 0.607708366554472 -1.61948824349765 -0.544549698058417 Q6VY07 PACS1 Q6VY07.2.T46.p_PACS1 Q6VY07-2_T46t _1_1_46_46 Q6VY07-2 Q6VY07-2 Isoform 2 of Phosphofurin acidic cluster sorting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9952.10180.4 16.98 16.98 6.712 3 1 1 0 882.4541 3446.8181 T46t TMT10 22 (R) GSGVAQSPQQPPPQQQQQQPPQQPtPPK (L) GS(0.0)GVAQS(0.0)PQQPPPQQQQQQPPQQPT(0.99)PPK K:TMT10,t:Phosphorylated T PACS1 109968.1 1 2 786.1 225.23 HUMAN 1 -7.9097 -2.163 QQPPRSASAGPAGES-p Q8N5U6-2;S41-p QQPPRSASAGPAGES 0.472226540382335 0.534227874715423 0.112 -0.105 6.01020357406537 3.66283297352065 0.112 -0.105 0.25059917827641 0.430245862561608 1.28638107640308 -0.851969380132358 Q8N5U6 RNF10 Q8N5U6.2.S41.p_RNF10 Q8N5U6-2_S41s _1_1_41_41 Q8N5U6-2 Q8N5U6-2|F5H5Z1 Isoform 2 of RING finger protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7097.7097.3 14.52 14.52 2.385 3 1 1 0 652.0258 1874.095 S41s TMT10 39 (R) SAsAGPAGESKPK (S) S(0.0)AS(0.99)AGPAGES(0.0)KPK K:TMT10,s:Phosphorylated S RNF10 91579.1 5 1 1869.1 109.95 HUMAN 1 6.0102 -3.6628 QQPPSPPSPDELPAN-p A0A0G2JPP5;S1309-p QQPPSPPSPDELPAN 0.701611654046682 0.498820552001293 -0.0516666666666667 0.064 2.89409697325522 4.04152060899526 -0.0516666666666667 0.064 0.513558950505052 0.394319213669506 -0.698818875300578 0.924900172901754 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1309.p_SCRIB A0A0G2JPP5_S1306sS1309s_2_2_1306_1309 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21658.21866.4 20.38 17.62 3.96 5 2 2 0 856.3937 3262.6124 S1306s S1309s TMT10 1292 (K) MAESPCSPSGQQPPsPPsPDELPANVK (Q) MAES(0.0)PCS(0.0)PS(0.0)GQQPPS(0.99)PPS(0.99)PDELPANVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SCRIB 178690.9 22 47 22.1 1004.81 HUMAN 1 -2.8941 4.0415 QQPQAAKSPSPVQGK-p Q96JP5;S101-p QQPQAAKSPSPVQGK 0.179989525186209 0.073623881496724 0.232 0.208333333333333 14.6938421356687 15.0430858827499 0.232 0.208333333333333 0.0339324944266655 0.0313106015654011 2.82122580069069 2.88464689000566 Q96JP5 ZFP91 Q96JP5.S101.p_ZFP91 Q96JP5_S101sS103s_2_2_101_103 Q96JP5 Q96JP5|Q96JP5-2 E3 ubiquitin-protein ligase ZFP91 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11101.11101.5 10.43 10.43 10.433 5 2 2 0 781.4183 3743.1374 S101s S103s TMT10 82 (R) SSPSARPPDVPGQQPQAAKsPsPVQGKK (S) S(0.0)S(0.0)PS(0.0)ARPPDVPGQQPQAAKS(0.99)PS(0.99)PVQGKK K:TMT10,s:Phosphorylated S ZFP91 64299.7 4 6 1081.1 179.92 HUMAN 1 14.6938 15.0431 QQPQSRRSPVSPQLQ-p Q7Z5Q1-9;S526-p QQPQSRRSPVSPQLQ 0.849516481351664 0.701694375443354 0.0343333333333333 0.044 1.37088355831682 2.11397500977733 0.0343333333333333 0.044 0.729309119538439 0.614614071328656 0.364486838646179 0.533833948787491 Q7Z5Q1 CPEB2 Q7Z5Q1.9.S526.p_CPEB2 Q7Z5Q1-9_S526sS529s_2_2_526_529 Q7Z5Q1-9 Q7Z5Q1-9|Q7Z5Q1-8|J3KN18|Q7Z5Q1-3|Q7Z5Q1-6|Q7Z5Q1-4|Q7Z5Q1-5 Isoform 8 of Cytoplasmic polyadenylation element-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15619.15619.4 13.6 13.6 99 2 2 2 0 738.1154 2789.5121 S526s S529s TMT10 525 (R) RsPVsPQLQQQHQAAAAAFLQQR (N) RS(1.0)PVS(1.0)PQLQQQHQAAAAAFLQQR s:Phosphorylated S CPEB2 110886.2 1 1 6149.1 13.6 HUMAN 1 1.3709 2.114 QQPRGQGTPPSGPGV-p Q9UMN6;T2083-p QQPRGQGTPPSGPGV 0.328703562940802 0.185516494185612 0.144666666666667 -0.204666666666667 9.03514726202391 9.62157995429709 0.144666666666667 -0.204666666666667 0.124877809988745 0.109104334493995 1.81444731869151 -1.91529248851496 Q9UMN6 KMT2B Q9UMN6.T2083.p_KMT2B Q9UMN6_T2083t _1_1_2083_2083 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7869.7869.3 11.98 11.98 9.966 2 1 1 0 506.5945 1437.8011 T2083t TMT10 2080 (R) GQGtPPSGPGVVR (A) GQGT(0.99)PPS(0.0)GPGVVR t:Phosphorylated T KMT2B 297845.7 2 18 388.1 332.76 HUMAN 1 9.0351 -9.6216 QQPRMARSPTNSLLK-p Q14106;S222-p QQPRMARSPTNSLLK 0.272389658183387 0.226157875335128 -0.161333333333333 0.132 10.698437213684 8.50290632678006 -0.161333333333333 0.132 0.0851444370952731 0.141159258157903 -2.1033581034959 1.72172753274376 Q14106 TOB2 Q14106.S222.p_TOB2 Q14106_S222s _1_1_222_222 Q14106 Q14106|Q14106-2 Protein Tob2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13764.13764.3 14.4 9.29 2.382 3 1 1 0 585.9921 1675.9929 S222s TMT10 219 (R) MARsPTNSLLK (H) MARS(0.99)PT(0.0)NS(0.0)LLK K:TMT10,s:Phosphorylated S TOB2 36802.7 7 3 2784.1 70.75 HUMAN 1 -10.6984 8.5029 QQQEEQGSVNDVKEE-p Q9Y4W2;S560-p QQQEEQGSVNDVKEE 0.161635164088614 0.00834819694307075 -0.448333333333333 0.619 15.8422996692774 29.5453624077898 -0.448333333333334 0.619 0.026047739089945 0.00111035987473695 -3.03796838730256 6.28521861883667 Q9Y4W2 LAS1L Q9Y4W2.S560.p_LAS1L Q9Y4W2_S560s _1_1_560_560 Q9Y4W2 Q9Y4W2|Q9Y4W2-2|Q9Y4W2-3 Ribosomal biogenesis protein LAS1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9225.9225.3 18.75 16.17 99 1 1 1 0 948.1404 2762.4411 S560s TMT10 552 (K) AQQQEEQGsVNDVKEEEK (E) AQQQEEQGS(1.0)VNDVKEEEK K:TMT10,s:Phosphorylated S LAS1L 84033.3 5 4 1725.1 119.4 HUMAN 1 -15.8423 29.5454 QQQGEDGSPQAHRRG-p P10275;S96-p QQQGEDGSPQAHRRG 0.129751256844141 0.0368200010402739 0.454 0.412 18.3623268190346 19.2872556117616 0.454 0.412 0.0145803288086926 0.0117835035998047 3.5359679776548 3.7243022778878 P10275 AR P10275.S96.p_AR P10275_S96s _1_1_96_96 P10275 P10275|F5GZG9|P10275-4|P10275-3|A0A087WZ66|E9PEG3 Androgen receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3703.3703.3 16.97 16.97 99 1 1 1 0 710.989 2050.9852 S96s TMT10 86 (R) QQQQQQGEDGsPQAHR (R) QQQQQQGEDGS(1.0)PQAHR s:Phosphorylated S AR 100726.6 4 1 2116.1 96.92 HUMAN 1 18.3623 19.2873 QQQMIYDSPPSRAPS-p Q13480-2;S244-p QQQMIYDSPPSRAPS 0.446797361450678 0.995186789721184 0.105 -0.000666666666666649 6.45628791899173 0.0283705476380894 0.105 -0.000666666666666643 0.226136782195479 0.993488730776635 1.36546170614429 -0.00854371744023629 Q13480 GAB1 Q13480.2.S244.p_GAB1 Q13480-2_S244s _1_1_244_244 Q13480-2 Q13480-2|B7Z3B9 Isoform 2 of GRB2-associated-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24385.24385.4 15.42 15.42 2 8 1 1 0 1027.4823 4026.9428 S244s TMT10 230 (K) HGMNGFFQQQMIYDsPPSRAPSASVDSSLYNLPR (S) HGMNGFFQQQMIY(0.0)DS(0.99)PPS(0.0)RAPS(0.0)AS(0.0)VDS(0.0)S(0.0)LY(0.0)NLPR s:Phosphorylated S GAB1 80631.3 2 3 368.1 340.82 HUMAN 1 6.4563 -0.0284 QQQPQAASPSVPEPH-p Q14444;S335-p QQQPQAASPSVPEPH 0.519206041782153 0.293241476630453 0.087 0.107333333333333 5.2575605774464 7.03245300634735 0.087 0.107333333333333 0.298018992551262 0.198040812466561 1.15105488166671 1.46628576695455 Q14444 CAPRIN1 Q14444.S335.p_CAPRIN1 Q14444_S335s _1_1_335_335 Q14444 Q14444|Q14444-2|G3V153 Caprin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31830.32027.5 31.14 31.14 1.625 7 1 1 0 1074.9436 5290.7182 S335s TMT10 311 (K) EQVDEWTVETVEVVNSLQQQPQAAsPSVPEPHSLTPVAQADPLVRR (Q) EQVDEWT(0.0)VET(0.0)VEVVNS(0.0)LQQQPQAAS(0.99)PS(0.0)VPEPHS(0.0)LT(0.0)PVAQADPLVRR s:Phosphorylated S CAPRIN1 78536 48 4 1559.1 131.63 HUMAN 1 5.2576 7.0325 QQQPTPVTPKKYPLR-p O95251;T88-p QQQPTPVTPKKYPLR 0.434508986821391 0.00153570152759703 -0.148333333333333 -1.12733333333333 6.66806467317529 45.3981970116652 -0.148333333333333 -1.12733333333333 0.215374128287967 2.8852290671981e-05 -1.40277519966215 -12.8478609653422 O95251 KAT7 O95251.T88.p_KAT7 O95251_T88t _1_1_88_88 O95251 O95251|O95251-4|O95251-2 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11426.11426.3 12.12 12.12 1.102 4 1 1 0 879.169 2555.5277 T88t TMT10 80 (R) SQQQPTPVtPKKYPLR (Q) S(0.0)QQQPT(0.0)PVT(0.99)PKKY(0.0)PLR K:TMT10,t:Phosphorylated T KAT7 71325.8 4 6 691.1 243.06 HUMAN 1 -6.6681 -45.3982 QQQQCSKSYVDRHME-p Q96F86;S140-p QQQQCSKSYVDRHME 0.00861592953244037 0.00109454193985794 -1.601 -1.37266666666667 55.9886590926588 49.9001891759394 -1.601 -1.37266666666667 2.51845439393542e-06 1.02324841925369e-05 -20.3858720254017 -15.6245717160461 Q96F86 EDC3 Q96F86.S140.p_EDC3 Q96F86_S140s _1_1_140_140 Q96F86 Q96F86 Enhancer of mRNA-decapping protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12274.12274.3 16.6 16.6 6.152 5 1 1 0 735.6964 2125.1112 S140s TMT10 140 (K) sYVDRHMESLSQSK (S) S(0.99)Y(0.0)VDRHMES(0.0)LS(0.0)QS(0.0)K K:TMT10,s:Phosphorylated S EDC3 56818.2 4 2 2217.1 93.04 HUMAN 1 -55.9887 -49.9002 QQQQRADSDKRTPKT-p C9JQZ6;S263-p QQQQRADSDKRTPKT 0.808989318004032 0.191774212104076 -0.0453333333333333 0.348333333333333 1.7680116964737 9.43034844485264 -0.0453333333333333 0.348333333333333 0.66557780382229 0.114015830626278 -0.456790804756974 1.88217560928103 C9JQZ6 NotFound C9JQZ6.S263.p_NotFound C9JQZ6_S263s _1_1_263_263 C9JQZ6 C9JQZ6|F5H7J8|Q8NEG2-2 Uncharacterized protein C7orf57 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25224.25224.5 9.61 9.61 9.609 4 1 1 0 840.626 4119.1615 S263s TMT10 236 (K) NPAGSRLSFPPVNGYKDEWLQQQQRADsDK (R) NPAGS(0.0)RLS(0.0)FPPVNGY(0.0)KDEWLQQQQRADS(0.99)DK K:TMT10,s:Phosphorylated S C7orf57 36303.8 1 1 6772.1 9.61 HUMAN 1 -1.768 9.4303 QQRKWCFSEPGKLDR-p Q2M3G4;S224-p QQRKWCFSEPGKLDR 0.689454359376595 0.0264325817251409 -0.075 -0.313333333333333 3.02828846268268 21.4247910715962 -0.075 -0.313333333333333 0.497933279846025 0.00720312402864597 -0.726152169953911 -4.18733908692552 Q2M3G4 SHROOM1 Q2M3G4.S224.p_SHROOM1 Q2M3G4_S224s _1_1_224_224 Q2M3G4 Q2M3G4|Q2M3G4-2|A6NN40 Protein Shroom1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16883.16883.4 9.49 6.37 99 1 1 1 0 573.3076 2210.2359 S224s TMT10 220 (R) KWCFsEPGKLDR (V) KWCFS(1.0)EPGKLDR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SHROOM1 91583.2 5 5 1717.1 119.73 HUMAN 1 -3.0283 -21.4248 QQRLDADSDSGDDSD-p O60333-3;S663-p QQRLDADSDSGDDSD 0.363237668928785 0.0238611578663223 -0.129 -0.446 8.16750913353671 22.1170447939897 -0.129 -0.446 0.152492711460657 0.00614179788602119 -1.66420709686339 -4.34412058454877 O60333 KIF1B O60333.3.S663.p_KIF1B O60333-3_S663sS665s_2_2_663_665 O60333-3 O60333-3 Isoform 3 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18093.18093.4 11.51 11.51 4.094 3 2 2 0 981.9653 3764.9029 S663s S665s TMT10 646 (K) EKEEADLLLEQQRLDADsDsGDDSDKR (S) EKEEADLLLEQQRLDADS(0.99)DS(0.99)GDDS(0.0)DKR K:TMT10,s:Phosphorylated S KIF1B 131388.1 5 19 606.2 262.24 HUMAN 1 -8.1675 -22.117 QQRLYADSDSGDDSD-p O43896;S674-p QQRLYADSDSGDDSD 0.303790324650766 0.636115126337422 0.184833333333333 0.0495 9.6941060643034 2.67442092205128 0.184833333333333 0.0495 0.107297448220527 0.540204139499831 1.92861176770466 0.653384365560418 O43896 KIF1C O43896.S674.p_KIF1C O43896_S674sS676s_2_2_674_676 O43896 O43896 Kinesin-like protein KIF1C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14160.14160.4 12.36 12.36 3.247 6 2 2 0 774.8222 2936.3369 S674s S676s TMT10 670 (R) LYADsDsGDDSDKRSCEESWR (L) LY(0.0)ADS(0.99)DS(0.99)GDDS(0.0)DKRS(0.0)CEES(0.0)WR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S KIF1C 123800.2 5 13 954.1 195.97 HUMAN 2 9.6941 2.6744 QQRQLVSTLEKKQRK-p Q7Z406-2;T1503-p QQRQLVSTLEKKQRK 0.458594926128479 0.644651562868138 0.127 0.0693333333333334 6.24575202096626 2.59911092067395 0.127 0.0693333333333334 0.237369436006664 0.549653386326623 1.32822653893949 0.637658000709011 Q7Z406 MYH14 Q7Z406.2.T1503.p_MYH14 Q7Z406-2_T1503t _1_1_1503_1503 Q7Z406-2 Q7Z406-2|Q7Z406-6|A1L2Z2|A0A0C4DFM8 Isoform 2 of Myosin-14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16263.16263.3 7.64 6.17 2.244 2 1 1 0 485.9462 1375.8561 T1503t TMT10 1499 (R) QLVStLEK (K) QLVS(0.0)T(0.99)LEK K:TMT10,t:Phosphorylated T MYH14 233033.9 3 49 296.6 379.15 HUMAN 1 6.2458 2.5991 QQRRSPASPHPPPFT-p Q17RY0;S255-p QQRRSPASPHPPPFT 0.443781954147912 0.506190968863585 0.276333333333333 -0.263666666666667 6.50288126785553 3.96230057057344 0.276333333333333 -0.263666666666667 0.223723638195837 0.401578028192872 1.3736826786404 -0.909763419072959 Q17RY0 CPEB4 Q17RY0.S255.p_CPEB4 Q17RY0_S255s _1_1_255_255 Q17RY0 Q17RY0|Q17RY0-2|B7ZLQ8|E5RJM0 Cytoplasmic polyadenylation element-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7572.7572.4 11.45 11.45 2.402 3 1 1 0 434.9676 1656.8808 S255s TMT10 252 (R) SPAsPHPPPFTHR (N) S(0.0)PAS(0.99)PHPPPFT(0.0)HR s:Phosphorylated S CPEB4 80778.1 1 3 1827.1 112.47 HUMAN 1 6.5029 -3.9623 QQRTNAVSPKLLSRH-p Q6XZF7;S659-p QQRTNAVSPKLLSRH 0.473965846540623 0.947907279217874 0.158666666666667 0.0133333333333333 5.97019357960747 0.332717465035357 0.158666666666667 0.0133333333333333 0.252918525966917 0.926250069334374 1.2792519802695 0.0969485602008922 Q6XZF7 DNMBP Q6XZF7.S659.p_DNMBP Q6XZF7_S659s _1_1_659_659 Q6XZF7 Q6XZF7 Dynamin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7155.7155.2 10.03 5.06 5.322 2 1 1 0 627.8478 1174.7196 S659s TMT10 655 (R) TNAVsPK (L) T(0.0)NAVS(0.99)PK K:TMT10,s:Phosphorylated S DNMBP 178827.3 1 1 5973.1 14.92 HUMAN 1 5.9702 0.3327 QQRVKRGTSPRPPEG-p P21127;T751-p QQRVKRGTSPRPPEG 0.203968533214827 0.00703829897901429 -0.531333333333333 0.673666666666667 13.376435877603 30.8317291031257 -0.531333333333334 0.673666666666667 0.045957501732198 0.00082570913570441 -2.5791250900833 6.67825124048309 P21127 CDK11B P21127.T751.p_CDK11B P21127_T751tS752s_2_2_751_752 P21127 P21127|J3QR44|A0A0D9SEN2|Q9UQ88|A0A0D9SER5|P21127-2|B7ZVY7|P21127-3|Q9UQ88-2|Q9UQ88-3|Q5QPR3 Cyclin-dependent kinase 11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17591.17591.5 18.05 14.11 11.035 4 2 2 0 607.4963 2873.5158 T751t S752s TMT10 749 (K) RGtsPRPPEGGLGYSQLGDDDLK (E) RGT(0.99)S(0.99)PRPPEGGLGY(0.0)S(0.0)QLGDDDLK K:TMT10,t:Phosphorylated T,s:Phosphorylated S CDK11B 92876.5 6 12 421.1 320.22 HUMAN 1 -13.3764 30.8317 QQSLEDGSPAKGEPS-p Q8IV36;S653-p QQSLEDGSPAKGEPS 0.786969878882323 0.0090322518183777 0.042 -0.608 2.00875105748155 28.9297542657308 0.042 -0.608 0.629687242053436 0.00127945369667861 0.510739153573315 -6.10376992730226 Q8IV36 HID1 Q8IV36.S653.p_HID1 Q8IV36_S653s _1_1_653_653 Q8IV36 Q8IV36|Q8IV36-2|Q8IV36-3 Protein HID1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16820.17239.3 20.08 16.37 1.139 4 1 1 0 1087.866 3181.6166 S653s TMT10 640 (R) SLEPEPQQSLEDGsPAKGEPSQAWR (E) S(0.0)LEPEPQQS(0.0)LEDGS(0.99)PAKGEPS(0.0)QAWR K:TMT10,s:Phosphorylated S HID1 89370.5 10 8 589.1 264.44 HUMAN 1 2.0088 -28.9298 QQSPGQQSPLPVEPE-p O95382;S1149-p QQSPGQQSPLPVEPE 0.237800187730078 0.691706328160212 -0.182666666666667 -0.045 11.9538953431124 2.19588463105306 -0.182666666666667 -0.045 0.0637691261420056 0.60313084138386 -2.32415957363207 -0.551691575607031 O95382 MAP3K6 O95382.S1149.p_MAP3K6 O95382_S1149s _1_1_1149_1149 O95382 O95382|O95382-3 Mitogen-activated protein kinase kinase kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35426.35426.4 20.48 20.48 1.279 6 1 1 0 1121.0498 4401.2081 S1149s TMT10 1132 (R) SEELSNEGDSQQSPGQQsPLPVEPEQGPAPLMVQLSLLR (A) S(0.0)EELS(0.0)NEGDS(0.0)QQS(0.0)PGQQS(0.99)PLPVEPEQGPAPLMVQLS(0.0)LLR s:Phosphorylated S MAP3K6 144305.1 2 4 3537.1 48.8 HUMAN 1 -11.9539 -2.1959 QQTEKPESEDEWERT-p O60231;S160-p QQTEKPESEDEWERT 0.689506658559235 0.0825038254171538 0.057 0.238 3.02651698929237 14.3516204484168 0.057 0.238 0.498136426677157 0.0367145284941373 0.725793070236038 2.7560044630424 O60231 DHX16 O60231.S160.p_DHX16 O60231_S160s _1_1_160_160 O60231 O60231 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9182.9182.3 16.5 16.5 4.047 2 1 1 0 777.0299 2249.1086 S160s TMT10 153 (K) QQTEKPEsEDEWER (T) QQT(0.0)EKPES(0.99)EDEWER K:TMT10,s:Phosphorylated S DHX16 119946.1 13 3 2216.1 93.19 HUMAN 1 3.0265 14.3516 QQTERNQSLLVPANP-p Q9H4B6;S291-p QQTERNQSLLVPANP 0.170677699585152 0.755031745863476 0.241 0.0633333333333334 15.3209256638306 1.68719044825726 0.241 0.0633333333333334 0.0293702358223978 0.678080031450905 2.93886057581393 0.43830893062003 Q9H4B6 SAV1 Q9H4B6.S291.p_SAV1 Q9H4B6_S291s_1_1_291_291 Q9H4B6 Q9H4B6 Protein salvador homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32238.32238.3 13.59 12.57 2.454 4 1 1 0 1069.2124 3124.6417 S291s N297n TMT10 289 (R) NQsLLVPAnPYHTAEIPDWLQVYAR (A) N(0.0)QS(0.99)LLVPAN(0.99)PY(0.0)HT(0.0)AEIPDWLQVY(0.0)AR s:Phosphorylated S,n:Deamidated SAV1 44747.2 1 5 2825.1 69.19 HUMAN 1 15.3209 1.6872 QQTHPQGSPRTSTPF-p Q8TAP9;S115-p QQTHPQGSPRTSTPF 0.479084409017544 0.963197473519748 0.11 0.00700000000000002 5.88141646737928 0.232259459461295 0.11 0.00504026509851154 0.25814181143343 0.947925167663864 1.26340998575302 0.068391731653413 Q8TAP9 MPLKIP Q8TAP9.S115.p_MPLKIP Q8TAP9_S115s _1_1_115_115 Q8TAP9 Q8TAP9 M-phase-specific PLK1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8130.8130.4 23.25 23.25 2.463 6 1 1 0 741.845 2884.3924 S115s TMT10 93 (R) SPAGSQQQFGYSPGQQQTHPQGsPR (T) S(0.0)PAGS(0.0)QQQFGY(0.0)S(0.0)PGQQQT(0.0)HPQGS(0.99)PR s:Phosphorylated S MPLKIP 19203.6 4 4 1651.1 123.4 HUMAN 1 5.8814 0.2323 QQTPKRHSLSSTKLL-p P42858;S1862-p QQTPKRHSLSSTKLL 0.117095640514477 0.03013422314013 0.322666666666667 0.359333333333333 19.3891057386131 20.5763365553237 0.322666666666667 0.359333333333333 0.0115103737613984 0.0087572216982616 3.74905509582602 3.9998634048831 P42858 HTT P42858.S1862.p_HTT P42858_S1862s _1_1_1862_1862 P42858 P42858 Huntingtin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.3529.3529.2 9.11 9.11 9.114 4 1 1 0 727.3992 1373.8265 S1862s TMT10 1860 (K) RHsLSSTK (L) RHS(0.99)LS(0.0)S(0.0)T(0.0)K K:TMT10,s:Phosphorylated S HTT 351590.8 5 8 343.1 353.16 HUMAN 1 19.3891 20.5763 QQTYEPDSPPEVRKP-p Q86YA3;S864-p QQTYEPDSPPEVRKP 0.451040131886656 0.0768776908087648 0.160333333333333 -0.257333333333333 6.38438641105843 14.7827802273103 0.160333333333333 -0.257333333333333 0.229911851515127 0.0332446662446991 1.35276183572407 -2.83599201884708 Q86YA3 ZGRF1 Q86YA3.S864.p_ZGRF1 Q86YA3_S864s _1_1_864_864 Q86YA3 Q86YA3|Q86YA3-4 Protein ZGRF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12936.12936.4 16.56 16.56 2.436 5 1 1 0 861.9543 3364.8104 S864s TMT10 847 (K) KKNTVFQQGTQQTYEPDsPPEVR (K) KKNT(0.0)VFQQGT(0.0)QQT(0.0)Y(0.0)EPDS(0.99)PPEVR K:TMT10,s:Phosphorylated S ZGRF1 239050.7 1 1 4729.1 27.38 HUMAN 1 6.3844 -14.7828 QQVEAALSGNGENED-p O75940;S24-p QQVEAALSGNGENED 0.896558601256348 0.573867900191551 0.0216666666666667 0.055 0.929740470420753 3.25105063054732 0.0216666666666667 0.055 0.807283271162871 0.473036809650591 0.256160506479709 0.770844630145144 O75940 SMNDC1 O75940.S24.p_SMNDC1 O75940_S24s _1_1_24_24 O75940 O75940 Survival of motor neuron-related-splicing factor 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26893.26893.3 19.9 16.53 99 1 1 1 0 922.4749 2685.4459 S24s TMT10 14 (K) AQLQQVEAALsGNGENEDLLK (L) AQLQQVEAALS(1.0)GNGENEDLLK K:TMT10,s:Phosphorylated S SMNDC1 26881.8 1 1 3297.1 54.55 HUMAN 1 0.9297 3.2511 QRAFVDRTPPPAAVA-p Q5JTD0;T422-p QRAFVDRTPPPAAVA 0.541345228040383 0.122645157644515 0.128 -0.169666666666667 4.91615274939703 12.0203896917323 0.128 -0.169666666666667 0.322392347857605 0.0628002005767244 1.0886700176154 -2.33478437143216 Q5JTD0 TJAP1 Q5JTD0.T422.p_TJAP1 Q5JTD0_T422t _1_1_422_422 Q5JTD0 Q5JTD0|Q5JTD0-2|Q5JTD0-4 Tight junction-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12069.12069.3 16.26 12.01 99 1 1 1 0 635.67 1825.0282 T422t TMT10 417 (R) AFVDRtPPPAAVAQR (T) AFVDRT(1.0)PPPAAVAQR t:Phosphorylated T TJAP1 62162.4 5 7 1364.1 149.81 HUMAN 1 4.9162 -12.0204 QRAGEPNSPDAEEAN-p Q08J23;S743-p QRAGEPNSPDAEEAN 0.632464430366418 0.0151617863601756 -0.07 0.489666666666667 3.70683053739577 25.1675811853057 -0.07 0.489666666666667 0.42590912640509 0.00304257912642085 -0.860658073926913 5.07994964962074 Q08J23 NSUN2 Q08J23.S743.p_NSUN2 Q08J23_S743s _1_1_743_743 Q08J23 Q08J23|Q08J23-2|Q08J23-3 tRNA (cytosine(34)-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11873.12494.3 29.5 29.5 4.318 3 1 1 0 1108.4885 3243.481 S743s TMT10 738 (R) AGEPNsPDAEEANSPDVTAGCDPAGVHPPR (-) AGEPNS(0.99)PDAEEANS(0.0)PDVT(0.0)AGCDPAGVHPPR C:Carbamidomethylation,s:Phosphorylated S NSUN2 87267.9 7 4 1957.1 105.19 HUMAN 1 -3.7068 25.1676 QRAHTLLSPPSANNA-p A0A087WWF6;S50-p QRAHTLLSPPSANNA 0.617306864410826 0.153099407289359 0.0793333333333333 -0.160333333333333 3.88809750058587 10.7187789458635 0.0793333333333333 -0.160333333333333 0.40849829663471 0.0847465652484817 0.895678018298691 -2.10598998068866 A0A087WWF6 POLD2 A0A087WWF6.S50.p_POLD2 A0A087WWF6_S50s _1_1_50_50 A0A087WWF6 A0A087WWF6|P49005|F8W8R3 DNA polymerase delta subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16899.16899.3 17.39 17.39 5.471 4 1 1 0 693.0193 1997.0766 S50s TMT10 45 (R) AHTLLsPPSANNATFAR (V) AHT(0.0)LLS(0.99)PPS(0.0)ANNAT(0.0)FAR s:Phosphorylated S POLD2 55379.1 3 1 5662.1 17.39 HUMAN 1 3.8881 -10.7188 QRAITGASLADIMAK-p P83731;S86-p QRAITGASLADIMAK 0.182164595842396 0.343013766649649 -0.211666666666667 -0.143 14.5512031230054 6.1556319822231 -0.211666666666667 -0.143 0.035065471886107 0.242346527796042 -2.79469505854901 -1.31192139039134 P83731 RPL24 P83731.S86.p_RPL24 P83731_S86s _1_1_86_86 P83731 P83731|C9JNW5|C9JXB8 60S ribosomal protein L24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28535.28535.2 17.36 17.36 3.911 2 1 1 0 900.4898 1720.0079 S86s TMT10 81 (R) AITGAsLADIMAK (R) AIT(0.0)GAS(0.99)LADIMAK K:TMT10,s:Phosphorylated S RPL24 17892.7 3 4 2884.1 66.97 HUMAN 1 -14.5512 -6.1556 QRANMVSSCELELQE-p Q9BXL6;S241-p QRANMVSSCELELQE 0.262927961948431 0.391471866699501 0.2 0.0823333333333334 11.0073495560201 5.41487322925336 0.2 0.0823333333333334 0.0792985131575495 0.287417148958034 2.15739697533738 1.17931628411958 Q9BXL6 CARD14 Q9BXL6.S241.p_CARD14 Q9BXL6_S241s _1_1_241_241 Q9BXL6 Q9BXL6|Q9BXL6-2|I3L414 Caspase recruitment domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21278.21278.2 14.28 14.28 1.132 3 1 1 0 1152.0364 2223.0947 S241s TMT10 236 (R) ANMVSsCELELQEQSLR (T) ANMVS(0.0)S(0.99)CELELQEQS(0.0)LR C:Carbamidomethylation,s:Phosphorylated S CARD14 114922.3 4 2 816.1 219.94 HUMAN 1 11.0073 5.4149 QRCKRHASREEAELV-p A0PK00;S69-p QRCKRHASREEAELV 0.190117905997595 0.168211006739333 -0.301333333333333 0.147333333333333 14.1077386099459 10.1832066721935 -0.301333333333333 0.147333333333333 0.0388352530185667 0.0958692506510067 -2.71272099651078 2.01272766768295 A0PK00 TMEM120B A0PK00.S69.p_TMEM120B A0PK00_S69s _1_1_69_69 A0PK00 A0PK00 Transmembrane protein 120B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18543.18543.4 20.01 18.37 99 1 1 1 0 680.6097 2639.4452 S69s TMT10 66 (K) RHAsREEAELVQQMAANIK (E) RHAS(1.0)REEAELVQQMAANIK K:TMT10,s:Phosphorylated S TMEM120B 40758.5 3 1 4250.1 34.68 HUMAN 1 -14.1077 10.1832 QRDLELPSQEAPSFQ-p Q6PJF5;S166-p QRDLELPSQEAPSFQ 0.523646716131127 0.629729450846508 -0.285 0.107 5.19737697988623 2.73038621004447 -0.285 0.107 0.302177623972473 0.533287469111307 -1.14010852845506 0.665009081327463 Q6PJF5 RHBDF2 Q6PJF5.S166.p_RHBDF2 Q6PJF5_S166s _1_1_166_166 Q6PJF5 Q6PJF5|Q6PJF5-2 Inactive rhomboid protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20100.20100.4 11.25 11.25 11.255 4 1 1 0 803.9093 3132.649 S166s TMT10 161 (R) DLELPsQEAPSFQGTESPKPCK (M) DLELPS(0.99)QEAPS(0.0)FQGT(0.0)ES(0.0)PKPCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RHBDF2 98224.8 1 4 1595.1 129.07 HUMAN 1 -5.1974 2.7304 QRDLLMHSRRGT___-p Q9H270;S937-p QRDLLMHSRRGT___ 0.18709748510332 0.00432767968698182 0.258666666666667 -0.559 14.3055088951411 34.7409980205783 0.258666666666667 -0.559 0.0371064246588147 0.000335660469686785 2.74918499219548 -7.99935084597413 Q9H270 VPS11 Q9H270.S937.p_VPS11 Q9H270_S937s _1_1_937_937 Q9H270 Q9H270|A0A087WXL6|B7Z879 Vacuolar protein sorting-associated protein 11 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10295.10295.3 10.49 5.58 99 1 1 1 0 394.1966 1100.6084 S937s TMT10 932 (R) DLLMHsR (R) DLLMHS(1.0)R s:Phosphorylated S VPS11 109147 1 7 2679.1 74.23 HUMAN 1 14.3055 -34.741 QRDSLGESPVRVWVN-p B2RTY4-5;S1712-p QRDSLGESPVRVWVN 0.496561743471012 0.0285703245827849 -0.118 0.357 5.59921353110266 20.912909412977 -0.118 0.357 0.275472751496153 0.00810417963112331 -1.21282232491485 4.07363174856075 B2RTY4 MYO9A B2RTY4.5.S1712.p_MYO9A B2RTY4-5_S1712s _1_1_1712_1712 B2RTY4-5 B2RTY4-4|B2RTY4-2|H3BRD5|B2RTY4-5 Isoform 5 of Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28299.28299.3 14.11 14.11 2.169 3 1 1 0 791.4174 2292.2752 S1712s TMT10 1707 (R) DSLGEsPVRVWVNTFK (V) DS(0.0)LGES(0.99)PVRVWVNT(0.0)FK K:TMT10,s:Phosphorylated S MYO9A 267577.4 1 17 457.1 306.95 HUMAN 1 -5.5992 20.9129 QRDSQDASAEQSDHD-p Q6P2E9;S875-p QRDSQDASAEQSDHD 0.979664479571705 0.985229271909205 0.00566666666666666 0.00233333333333335 0.176478828116848 0.0958256027858344 0.00566666666666667 0.00233333333333335 0.960178809580224 0.978176983642179 0.052283318811963 0.02863914538444 Q6P2E9 EDC4 Q6P2E9.S875.p_EDC4 Q6P2E9_S875sS879s_2_2_875_879 Q6P2E9 Q6P2E9|Q6P2E9-2 Enhancer of mRNA-decapping protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20900.20900.5 19.28 19.28 1.115 7 2 2 0 804.9643 3860.8575 S875s S879s TMT10 870 (R) DSQDAsAEQsDHDDEVASLASASGGFGTKVPAPR (L) DS(0.0)QDAS(0.99)AEQS(0.99)DHDDEVAS(0.0)LAS(0.0)AS(0.0)GGFGT(0.0)KVPAPR K:TMT10,s:Phosphorylated S EDC4 153084.9 6 26 177.1 481.34 HUMAN 1 0.1765 0.0958 QREEWNLSTGQARLT-p Q9ULI0;S118-p QREEWNLSTGQARLT 0.627798233710989 0.00526062627901912 0.0746666666666667 -0.760666666666667 3.75631730542752 33.1217308730675 0.0746666666666667 -0.760666666666667 0.421083543990822 0.000487334225190251 0.870253106804903 -7.42767527607531 Q9ULI0 ATAD2B Q9ULI0.S118.p_ATAD2B Q9ULI0_S118s _1_1_118_118 Q9ULI0 Q9ULI0|Q9ULI0-2 ATPase family AAA domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9762.9762.3 13.82 13.82 1.109 4 1 1 0 710.3377 2049.0311 S118s TMT10 108 (R) STGQREEWNLsTGQAR (L) S(0.0)T(0.0)GQREEWNLS(0.99)T(0.0)GQAR s:Phosphorylated S ATAD2B 166451.5 1 4 531.1 280.81 HUMAN 1 3.7563 -33.1217 QREKRSDSVIHLQEI-p Q68DK2;S1742-p QREKRSDSVIHLQEI 0.580127954969095 0.0385289448197214 0.0786666666666666 0.302 4.34946523552916 18.9985768519389 0.0786666666666666 0.302 0.367327528247022 0.0125933801911895 0.983368085853735 3.66404210304141 Q68DK2 ZFYVE26 Q68DK2.S1742.p_ZFYVE26 Q68DK2_S1742s _1_1_1742_1742 Q68DK2 Q68DK2|Q68DK2-2|Q68DK2-5|G3V2D8 Zinc finger FYVE domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20294.20294.4 26.68 26.68 2.217 3 1 1 0 730.8775 2840.5216 S1742s TMT10 1739 (K) RSDsVIHLQEIVHQAADPETLPR (S) RS(0.0)DS(0.99)VIHLQEIVHQAADPET(0.0)LPR s:Phosphorylated S ZFYVE26 289306.4 3 9 898.1 203.99 HUMAN 1 4.3495 18.9986 QRESVGGSPQTKHLI-p Q08495;S156-p QRESVGGSPQTKHLI 0.104209357384164 0.0209483935182159 -0.302333333333333 -0.342 20.7170302951952 22.9623186508475 -0.301771542661574 -0.342 0.00847806946197517 0.00505554679812453 -4.03455066245597 -4.54045073304894 Q08495 DMTN Q08495.S156.p_DMTN Q08495_S156s _1_1_156_156 Q08495 Q08495|Q08495-2|Q08495-4|Q08495-3 Dematin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5015.5015.2 10.63 10.63 1.515 3 1 1 0 649.8134 1218.6527 S156s Hydrogen 151 (R) ESVGGsPQTK (H) ES(0.0)VGGS(0.99)PQT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S DMTN 45627.7 2 4 1283.1 158.63 HUMAN 1 -20.717 -22.9623 QRFLENGSQEDLLHG-p C9J6P4;S335-p QRFLENGSQEDLLHG 0.986625341798263 0.451877474628648 0.003 -0.0903333333333333 0.119212262509954 4.59718633937057 0.00300000000000001 -0.0903333333333333 0.972923679842347 0.346961563398334 0.0355395979585809 -1.02950039077697 C9J6P4 ZC3HAV1 C9J6P4.S335.p_ZC3HAV1 C9J6P4_S335s _1_1_335_335 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2|Q7Z2W4-3 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26895.26895.5 21.38 21.38 2.103 8 1 1 0 775.3773 3792.887 S335s TMT10 330 (R) FLENGsQEDLLHGNPGSTYLASNSTSAPNWK (S) FLENGS(0.99)QEDLLHGNPGS(0.0)T(0.0)Y(0.0)LAS(0.0)NS(0.0)T(0.0)S(0.0)APNWK K:TMT10,s:Phosphorylated S ZC3HAV1 115909.2 14 9 361.1 343.37 HUMAN 1 0.1192 -4.5972 QRFNAISSEDFDQEL-p O15040;S449-p QRFNAISSEDFDQEL 0.125743941781331 0.161596634631732 -0.3 -0.168333333333333 18.7069430240204 10.4081303968866 -0.3 -0.168333333333333 0.0134680803156269 0.0910305067366568 -3.6067769693234 -2.0518463218676 O15040 TECPR2 O15040.S449.p_TECPR2 O15040_S448sS449s_2_2_448_449 O15040 O15040|O15040-2 Tectonin beta-propeller repeat-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30898.30898.5 14.46 14.46 99 2 2 2 0 606.1163 2866.6169 S448s S449s TMT10 444 (R) FNAIssEDFDQELVVKPIK (V) FNAIS(1.0)S(1.0)EDFDQELVVKPIK K:TMT10,s:Phosphorylated S TECPR2 155842.4 6 4 3837.1 41.96 HUMAN 1 -18.7069 -10.4081 QRFRRSVTLESKKQL-p P82933;T249-p QRFRRSVTLESKKQL 0.856470292522456 0.596255650817582 -0.041 -0.062 1.30996725600632 3.04029207414992 -0.041 -0.062 0.739610851394746 0.496558925469249 -0.349919697890323 -0.72848122132895 P82933 MRPS9 P82933.T249.p_MRPS9 P82933_T249t _1_1_249_249 P82933 P82933 28S ribosomal protein S9, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11558.11558.3 9.02 9.02 2.082 3 1 1 0 553.6607 1579.0034 T249t TMT10 247 (R) SVtLESKK (Q) S(0.0)VT(0.99)LES(0.0)KK K:TMT10,t:Phosphorylated T MRPS9 46062.2 1 2 5223.1 21.6 HUMAN 1 -1.31 -3.0403 QRFWESNSAAHKEIC-p Q5JTH9;S118-p QRFWESNSAAHKEIC 0.238948116710707 0.49737891782879 -0.291666666666667 0.0766666666666667 11.8874105243813 4.05774998533753 -0.291666666666667 0.0766666666666667 0.0647528588810504 0.392848411564052 -2.31238015734161 0.927993733389332 Q5JTH9 RRP12 Q5JTH9.S118.p_RRP12 Q5JTH9_S118s _1_1_118_118 Q5JTH9 Q5JTH9|Q5JTH9-3 RRP12-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15032.15032.3 12.19 12.19 2.307 2 1 1 0 572.2834 1634.8691 S118s TMT10 113 (R) FWESNsAAHK (E) FWES(0.0)NS(0.99)AAHK K:TMT10,s:Phosphorylated S RRP12 145125.9 1 6 1122.1 175.08 HUMAN 1 -11.8874 4.0577 QRGFQHPSPRGRSLP-p P55265-4;S155-p QRGFQHPSPRGRSLP 0.571362109790302 0.776385332570271 0.142 -0.0296666666666666 4.47536615644747 1.5204253679914 0.142 -0.0296666666666666 0.356831663310107 0.704624051466664 1.00697366903223 -0.399725049280975 P55265 ADAR P55265.4.S155.p_ADAR P55265-4_S155s _1_1_155_155 P55265-4 P55265-4|P55265-2|P55265-3 Isoform 4 of Double-stranded RNA-specific adenosine deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5250.5250.3 10.23 10.23 99 1 1 1 0 412.2029 1154.6268 S155s TMT10 150 (R) GFQHPsPR (G) GFQHPS(1.0)PR s:Phosphorylated S ADAR 142147.5 1 2 584.1 265.43 HUMAN 1 4.4754 -1.5204 QRGMFTISDHQPEQR-p O95613;S175-p QRGMFTISDHQPEQR 0.716375881972104 0.0232251310177084 0.0786666666666666 -0.447 2.73111452182685 22.3029378298799 0.0786666666666667 -0.447 0.533198044309047 0.00588445460679564 0.665248688471523 -4.38682786320251 O95613 PCNT O95613.S175.p_PCNT O95613_S175s _1_1_175_175 O95613 O95613|O95613-2 Pericentrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13707.13707.3 15.55 15.55 1.547 2 1 1 0 618.9508 1774.8744 S175s TMT10 170 (R) GMFTIsDHQPEQR (G) GMFT(0.0)IS(0.99)DHQPEQR s:Phosphorylated S PCNT 380826.2 2 3 222.1 428 HUMAN 1 2.7311 -22.3029 QRGRRNPSPDHTYKR-p Q15695;S389-p QRGRRNPSPDHTYKR 0.227780752069412 0.280780906388728 0.223333333333333 -0.152666666666667 12.3548665646148 7.26974273152193 0.223333333333333 -0.152666666666667 0.0581451296911648 0.187510558276246 2.39544083352048 -1.50771976536567 Q15695 NotFound Q15695.S389.p_NotFound Q15695_S389s _1_1_389_389 Q15695 Q15695 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3430.3430.4 9.35 9.35 3.866 3 1 1 0 478.002 1829.0182 S389s TMT10 386 (R) RNPsPDHTYKR (N) RNPS(0.99)PDHT(0.0)Y(0.0)KR K:TMT10,s:Phosphorylated S ZRSR1 58326.9 1 1 6808.1 9.35 HUMAN 1 12.3549 -7.2697 QRGRSPRSPSGHPHV-p Q8WX93;S1104-p QRGRSPRSPSGHPHV 0.674594569293558 0.548228560115613 0.057 0.0796666666666667 3.20311606863843 3.51112606928747 0.057 0.0796666666666667 0.47828679777169 0.445540710489392 0.761373981190378 0.822318794037085 Q8WX93 PALLD Q8WX93.S1104.p_PALLD Q8WX93_S1104s _1_1_1104_1104 Q8WX93 Q8WX93|Q8WX93-5|Q8WX93-9|Q8WX93-2|Q8WX93-3|Q8WX93-8|Q8WX93-4|Q8WX93-7 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3284.3284.3 14.04 14.04 1.178 2 1 1 0 428.2133 1202.6592 S1104s TMT10 1104 (R) sPSGHPHVR (R) S(0.99)PS(0.0)GHPHVR s:Phosphorylated S PALLD 151930.4 11 12 338.1 354.43 HUMAN 1 3.2031 3.5111 QRGSELLSDDEVPLG-p O60304;S144-p QRGSELLSDDEVPLG 0.659007682953711 0.798731294120568 -0.0686666666666667 -0.028 3.39885215005312 1.3647405444012 -0.0686666666666667 -0.028 0.457209015003566 0.730341443525904 -0.800322053579509 -0.362985359411642 O60304 ZNF500 O60304.S144.p_ZNF500 O60304_S144s _1_1_144_144 O60304 O60304|O60304-2 Zinc finger protein 500 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.34711.34711.3 18.3 18.3 2.241 2 1 1 0 871.4588 2532.3961 S144s TMT10 139 (R) GSELLsDDEVPLGIGGQFLK (H) GS(0.0)ELLS(0.99)DDEVPLGIGGQFLK K:TMT10,s:Phosphorylated S ZNF500 54586.3 3 24 240.53 415.72 HUMAN 1 -3.3989 -1.3647 QRGSKQQSPQAPFAE-p A0AVG3;S379-p QRGSKQQSPQAPFAE 0.478558986029447 0.0233937076168462 -0.0966666666666667 0.318666666666667 5.88978062172998 22.250271671335 -0.0966666666666667 0.318666666666667 0.257645129983817 0.00595624883265493 -1.26490394846761 4.37470177599872 A0AVG3 NotFound A0AVG3.S379.p_NotFound A0AVG3_S379s _1_1_379_379 A0AVG3 A0AVG3|E5RHT3 t-SNARE domain containing 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22764.22764.3 11.03 11.03 99 1 1 1 0 771.3827 2232.1548 S379s TMT10 377 (K) QQsPQAPFAELADDEK (V) QQS(1.0)PQAPFAELADDEK K:TMT10,s:Phosphorylated S TSNARE1 56817.7 1 1 4697.2 27.83 HUMAN 1 -5.8898 22.2503 QRGSLQDSVMNLTQS-p Q5THJ4;S930-p QRGSLQDSVMNLTQS 0.986072172466586 0.588758126143904 -0.00400000000000001 0.0573333333333333 0.123711523445817 3.10964742382177 -0.00400000000000002 0.0573333333333334 0.971916259537951 0.488692031542726 -0.036862605840845 0.742489860988854 Q5THJ4 VPS13D Q5THJ4.S930.p_VPS13D Q5THJ4_S930s _1_1_930_930 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.33604.33604.3 8.67 8.67 2.991 5 1 1 0 926.8137 2698.4395 S930s TMT10 925 (R) GSLQDsVMNLTQSIVLLEQHTR (E) GS(0.0)LQDS(0.99)VMNLT(0.0)QS(0.0)IVLLEQHT(0.0)R s:Phosphorylated S VPS13D 495672.3 1 3 124.1 545.31 HUMAN 1 -0.1237 3.1096 QRHGRSQSLPNSLDY-p Q96TC7;S46-p QRHGRSQSLPNSLDY 0.230234313621884 0.866328418655912 0.180666666666667 0.0256666666666667 12.2552826472389 0.877740655859616 0.180666666666667 0.0256666666666667 0.0594938035782248 0.817007295150095 2.37769815418991 0.242899843022088 Q96TC7 RMDN3 Q96TC7.S46.p_RMDN3 Q96TC7_S46sS50s_2_2_46_50 Q96TC7 Q96TC7 Regulator of microtubule dynamics protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15936.15936.2 12.42 8.37 1.641 7 2 2 0 1178.0126 2195.0778 S46s S50s TMT10 44 (R) SQsLPNsLDYTQTSDPGR (H) S(0.0)QS(0.99)LPNS(0.99)LDY(0.0)T(0.0)QT(0.0)S(0.0)DPGR s:Phosphorylated S RMDN3 52573.8 3 6 697.1 241.25 HUMAN 1 12.2553 0.8777 QRHLQPHSPPAPPAP-p Q5EBL2;S264-p QRHLQPHSPPAPPAP 0.55857246283501 0.0201264196371064 -0.092 0.355666666666667 4.66984338213601 23.2394209034233 -0.092 0.355666666666667 0.341205216145887 0.00474305225810702 -1.04319225142055 4.60602721904132 Q5EBL2 ZNF628 Q5EBL2.S264.p_ZNF628 Q5EBL2_S264s _1_1_264_264 Q5EBL2 Q5EBL2|A0A087WSX5 Zinc finger protein 628 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.37479.37479.5 28.24 28.24 15.592 4 1 1 0 868.4651 4258.3266 S264s TMT10 259 (R) HLQPHsPPAPPAPPPPPPPVVPELFLAAAETTVELVYR (C) HLQPHS(0.99)PPAPPAPPPPPPPVVPELFLAAAET(0.0)T(0.0)VELVY(0.0)R s:Phosphorylated S ZNF628 113166.7 1 74 240.76 415.72 HUMAN 1 -4.6698 23.2394 QRIELEDTDSENSSS-p Q96JK2;T929-p QRIELEDTDSENSSS 0.30573507454244 0.328929781169029 0.269666666666667 0.112 9.64648387620437 6.39384400343974 0.269666666666667 0.112 0.108480483547911 0.229411719281358 1.92035263101511 1.35409107036728 Q96JK2 DCAF5 Q96JK2.T929.p_DCAF5 Q96JK2_T929tS931s_2_2_929_931 Q96JK2 Q96JK2|Q96JK2-3|Q96JK2-2 DDB1- and CUL4-associated factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9546.9546.3 13.21 13.21 3.257 5 2 2 0 785.998 2196.0465 T929t S931s Hydrogen 922 (R) QRIELEDtDsENSSSEK (K) QRIELEDT(0.99)DS(0.99)ENS(0.0)S(0.0)S(0.0)EK K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S DCAF5 105045.5 3 12 948.1 196.79 HUMAN 1 9.6465 6.3938 QRIGLNNSPVNGNSS-p Q12948;S521-p QRIGLNNSPVNGNSS 0.905351305049427 0.0616566648286297 0.0236666666666667 0.303666666666667 0.850597772985373 16.1107074469504 0.0236666666666667 0.303666666666667 0.822129482352502 0.0244866433251327 0.235970838115591 3.08727603301295 Q12948 FOXC1 Q12948.S521.p_FOXC1 Q12948_S521s _1_1_521_521 Q12948 Q12948 Forkhead box protein C1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24462.24462.3 25.44 21.01 2.809 7 1 1 0 1046.4814 3057.472 S521s TMT10 516 (R) IGLNNsPVNGNSSCQMAFPSSQSLYR (T) IGLNNS(0.99)PVNGNS(0.0)S(0.0)CQMAFPS(0.0)S(0.0)QS(0.0)LY(0.0)R C:Carbamidomethylation,s:Phosphorylated S FOXC1 57130.1 2 3 3647.1 46.13 HUMAN 1 0.8506 16.1107 QRIQRCLSDPGPHPE-p P19634;S796-p QRIQRCLSDPGPHPE 0.201147832961288 0.00679864713825252 -0.221666666666667 -0.471333333333333 13.5326777885065 31.1123163258666 -0.221666666666667 -0.471333333333333 0.0443335206428529 0.000774048845839851 -2.60751025304604 -6.76656543597616 P19634 SLC9A1 P19634.S796.p_SLC9A1 P19634_S796s _1_1_796_796 P19634 P19634 Sodium/hydrogen exchanger 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21306.21306.3 17.59 17.59 99 1 1 1 0 911.4339 2652.3168 S796s TMT10 794 (R) CLsDPGPHPEPGEGEPFFPK (G) CLS(1.0)DPGPHPEPGEGEPFFPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLC9A1 91274.8 3 9 732.1 235.73 HUMAN 1 -13.5327 -31.1123 QRIRAANSNGLPRCK-p Q9P0V3;S11-p QRIRAANSNGLPRCK 0.158414346785039 0.243766971940826 -0.286 -0.160666666666667 16.0332853910547 8.07680748743818 -0.286 -0.160666666666667 0.0249270830647545 0.155710984740095 -3.07458403643424 -1.64795446170338 Q9P0V3 SH3BP4 Q9P0V3.S11.p_SH3BP4 Q9P0V3_S11s_1_1_11_11 Q9P0V3 Q9P0V3 SH3 domain-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7300.7300.2 10.61 8.58 1.061 1 1 1 0 605.2948 1128.6323 S11s N12n TMT10 8 (R) AANsnGLPR (C) AAN(0.50)S(1.0)N(0.50)GLPR s:Phosphorylated S,n:Deamidated SH3BP4 108463.7 1 1 782.1 225.91 HUMAN 1 -16.0333 -8.0768 QRIRIQESPGKVAAG-p P49736;S381-p QRIRIQESPGKVAAG 0.478558986029447 0.426977368093815 -0.219 0.123333333333333 5.89044825391319 4.9205282628688 -0.219 0.123333333333333 0.257605525759742 0.322067701390003 -1.26502318476501 1.08925697413445 P49736 MCM2 P49736.S381.p_MCM2 P49736_S381s _1_1_381_381 P49736 P49736 DNA replication licensing factor MCM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9185.9185.3 10.54 6.8 99 1 1 1 0 584.3256 1670.9954 S381s TMT10 378 (R) IQEsPGKVAAGR (L) IQES(1.0)PGKVAAGR K:TMT10,s:Phosphorylated S MCM2 102579 3 9 259.1 397.63 HUMAN 1 -5.8904 4.9205 QRIVSAQSLAEDDVE-p Q15388;S138-p QRIVSAQSLAEDDVE 0.456666260440105 0.808663429734309 -0.107 -0.0506666666666667 6.2727924816357 1.29185239333467 -0.107 -0.0506666666666667 0.235896095085863 0.742702286021327 -1.33301729641155 -0.345529630426946 Q15388 TOMM20 Q15388.S138.p_TOMM20 Q15388_S138s _1_1_138_138 Q15388 Q15388 Mitochondrial import receptor subunit TOM20 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23424.23424.2 11.59 11.59 4.323 2 1 1 0 842.8977 1604.8217 S138s TMT10 133 (R) IVSAQsLAEDDVE (-) IVS(0.0)AQS(0.99)LAEDDVE s:Phosphorylated S TOMM20 16468.7 2 3 5032.1 23.71 HUMAN 1 -6.2728 -1.2919 QRKELRMSLPARLRP-p Q2M3G4;S166-p QRKELRMSLPARLRP 0.173746120047528 0.133226317827396 -0.293333333333333 -0.300333333333333 15.1370405108167 11.5391784247167 -0.293333333333333 -0.300333333333333 0.0306405071232943 0.0701588008567924 -2.90419297206337 -2.24978185462263 Q2M3G4 SHROOM1 Q2M3G4.S166.p_SHROOM1 Q2M3G4_S166s _1_1_166_166 Q2M3G4 Q2M3G4|Q2M3G4-2|A6NN40 Protein Shroom1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15352.15352.3 8.28 8.28 99 1 1 1 0 461.246 1301.7561 S166s TMT10 162 (K) ELRMsLPAR (L) ELRMS(1.0)LPAR s:Phosphorylated S SHROOM1 91583.2 2 4 1717.1 119.73 HUMAN 1 -15.137 -11.5392 QRKFTVHSPDASSGT-p A0A087WV86;S374-p QRKFTVHSPDASSGT 0.472567058699638 0.00921472594365585 -0.108333333333333 -0.443666666666667 6.00052976989385 28.7649992499588 -0.108333333333333 -0.443666666666667 0.251158004017754 0.00132892378663625 -1.28465795983303 -6.05591374993774 A0A087WV86 BORA A0A087WV86.S374.p_BORA A0A087WV86_S374s _1_1_374_374 A0A087WV86 A0A087WV86|B5LMG6|Q6PGQ7|Q6PGQ7-2 Protein aurora borealis HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14697.14697.3 21.86 21.86 4.156 7 1 1 0 914.4218 2661.2888 S374s TMT10 370 (K) FTVHsPDASSGTNSNGITNPCIR (S) FT(0.0)VHS(0.99)PDAS(0.0)S(0.0)GT(0.0)NS(0.0)NGIT(0.0)NPCIR C:Carbamidomethylation,s:Phosphorylated S BORA 69923.5 2 5 1228.1 164.27 HUMAN 1 -6.0005 -28.765 QRKKGDDSDEEDLCI-p Q9Y3M8;S133-p QRKKGDDSDEEDLCI 0.572401251807993 0.00393784090484211 -0.132 0.584666666666667 4.46274859783939 35.4668930584867 -0.132 0.584666666666667 0.357869873852159 0.000283995000131576 -1.00461373483827 8.26769099745404 Q9Y3M8 STARD13 Q9Y3M8.S133.p_STARD13 Q9Y3M8_S133s _1_1_133_133 Q9Y3M8 Q9Y3M8|Q9Y3M8-2|Q9Y3M8-4|Q9Y3M8-3|Q9Y3M8-5 StAR-related lipid transfer protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17973.17973.5 21.98 14.94 9.042 3 1 1 0 714.365 3487.8297 S133s TMT10 128 (R) KKGDDsDEEDLCISNKWTFQR (T) KKGDDS(0.99)DEEDLCIS(0.0)NKWT(0.0)FQR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S STARD13 126277.4 15 1 564.1 271.22 HUMAN 1 -4.4627 35.4669 QRKSSLVTSKLAGQS-p Q5T5H1;T128-p QRKSSLVTSKLAGQS 0.311510707689535 0.0435575707206903 -0.415333333333333 0.344 9.47498273062707 18.2306513184856 -0.415333333333333 0.344 0.112850042491058 0.01502916554352 -1.89062271420697 3.50617906740599 Q5T5H1 NotFound Q5T5H1.T128.p_NotFound Q5T5H1_T128t _1_1_128_128 Q5T5H1 Q5T5H1|O43768-4|A6NMQ3|O43768-3|O43768-7|O43768-9|A0A1W2PRU0|O43768-2|O43768-5|O43768-6 Alpha-endosulfine HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10276.10276.3 8.64 8.64 1.102 4 1 1 0 539.6581 1536.9928 T128t TMT10 123 (R) KSSLVtSK (L) KS(0.0)S(0.0)LVT(0.99)S(0.0)K K:TMT10,t:Phosphorylated T ENSA 21164.7 1 12 1520.1 134.39 HUMAN 1 -9.475 18.2307 QRKTSPASLDFPESQ-p Q96JM3;S462-p QRKTSPASLDFPESQ 0.485418776358008 0.00385203903768179 0.147666666666667 -1.68666666666667 5.78345875336859 35.7294579531283 0.147666666666667 -1.68666666666667 0.264030516121877 0.000267334004983192 1.2458908383072 -8.36666743484433 Q96JM3 CHAMP1 Q96JM3.S462.p_CHAMP1 Q96JM3_S462s _1_1_462_462 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17165.17165.3 7.62 7.62 1.384 4 1 1 0 768.0818 2222.2636 S462s TMT10 457 (R) KTSPAsLDFPESQK (S) KT(0.0)S(0.0)PAS(0.99)LDFPES(0.0)QK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 1 27 25.1 950.05 HUMAN 1 5.7835 -35.7295 QRKVADVSQFKDLPD-p Q5TKA1-2;S223-p QRKVADVSQFKDLPD 0.333463124692512 0.00172752646433129 0.141 -0.831666666666667 8.90119124371789 43.7228204019116 0.141 -0.831666666666667 0.128789624102484 4.24343896377189e-05 1.79125861554756 -11.9395903555591 Q5TKA1 LIN9 Q5TKA1.2.S223.p_LIN9 Q5TKA1-2_S223s _1_1_223_223 Q5TKA1-2 Q5TKA1-2 Isoform 2 of Protein lin-9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36720.36720.4 19.95 19.95 15.014 2 1 1 0 816.2134 3181.8691 S223s TMT10 219 (K) VADVsQFKDLPDEIPLPLVIGTK (V) VADVS(0.99)QFKDLPDEIPLPLVIGT(0.0)K K:TMT10,s:Phosphorylated S LIN9 64323.3 1 5 1238.1 163 HUMAN 1 8.9012 -43.7228 QRKVRMNSYPYLADR-p J3KPD3;S205-p QRKVRMNSYPYLADR 0.203469268152067 0.0146368570227358 0.209 0.453333333333333 13.4003513331928 25.4070226458051 0.209 0.453333333333334 0.0457051213838239 0.00287937172360365 2.58346457956384 5.14105398794068 J3KPD3 RBM7 J3KPD3.S205.p_RBM7 J3KPD3_S205s _1_1_205_205 J3KPD3 J3KPD3|Q9Y580 RNA binding motif protein 7, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17135.17135.2 10.49 5.92 3.395 3 1 1 0 769.8505 1458.7249 S205s TMT10 203 (R) MNsYPYLADR (H) MNS(0.99)Y(0.0)PY(0.0)LADR s:Phosphorylated S RBM7 30590.1 1 3 4643.1 28.43 HUMAN 1 13.4004 25.407 QRLDLGGSERSRGVT-p Q8TEH3;S619-p QRLDLGGSERSRGVT 0.865557686443598 0.338654007256811 -0.0356666666666667 -0.105666666666667 1.21890465803433 6.22989994438285 -0.0356666666666667 -0.105666666666667 0.755282694859551 0.238237435543266 -0.327921537985255 -1.32509019526923 Q8TEH3 DENND1A Q8TEH3.S619.p_DENND1A Q8TEH3_S619s _1_1_619_619 Q8TEH3 Q8TEH3 DENN domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13189.13189.2 7.47 4.28 99 1 1 1 0 578.2832 1075.5945 S619s TMT10 614 (R) LDLGGsER (S) LDLGGS(1.0)ER s:Phosphorylated S DENND1A 111202.8 1 6 882.1 207.04 HUMAN 1 -1.2189 -6.2299 QRLDYVPSSASREVR-p Q6ZRV2;S513-p QRLDYVPSSASREVR 0.216110872870992 0.802948538760233 0.198 0.05 12.8231107379203 1.33447674907584 0.198 0.05 0.0522022144231071 0.735448599174912 2.47924075001044 0.355757963349685 Q6ZRV2 FAM83H Q6ZRV2.S513.p_FAM83H Q6ZRV2_S513s _1_1_513_513 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13955.13955.2 12.36 7.88 1.123 4 1 1 0 702.3417 1323.7106 S513s TMT10 508 (R) LDYVPsSASR (E) LDY(0.0)VPS(0.99)S(0.0)AS(0.0)R s:Phosphorylated S FAM83H 127633.5 13 7 7.1 1347.23 HUMAN 1 12.8231 1.3345 QRLERQISQDVKLEP-p Q01433;S168-p QRLERQISQDVKLEP 0.405599270487362 0.547185190146381 0.123333333333333 -0.0633333333333333 7.23785044105549 3.52176508565997 0.123333333333333 -0.0633333333333333 0.188892604971417 0.444450594482362 1.5025868057878 -0.824406832456207 Q01433 AMPD2 Q01433.S168.p_AMPD2 Q01433_S168s _1_1_168_168 Q01433 Q01433|Q01433-4|Q01433-2|Q01433-5|Q01433-3 AMP deaminase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26366.26366.4 17.62 17.62 99 1 1 1 0 577.0782 2225.3269 S168s TMT10 166 (R) QIsQDVKLEPDILLR (A) QIS(1.0)QDVKLEPDILLR K:TMT10,s:Phosphorylated S AMPD2 101484.8 15 4 1735.1 118.63 HUMAN 1 7.2379 -3.5218 QRLGTPKSVNKAVSQ-p Q15398;S642-p QRLGTPKSVNKAVSQ 0.964030867224484 0.0107297167154974 -0.012 -0.586 0.306497657593397 27.6128553254127 -0.012 -0.586 0.931859064814612 0.00173266446046584 -0.0895591113147282 -5.72930693511955 Q15398 DLGAP5 Q15398.S642.p_DLGAP5 Q15398_T639tS642s_2_2_639_642 Q15398 Q15398|Q15398-3|Q15398-1 Disks large-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13101.13101.3 7.38 4.41 99 2 2 2 0 597.6646 1631.0459 T639t S642s TMT10 637 (R) LGtPKsVNK (A) LGT(1.0)PKS(1.0)VNK K:TMT10,t:Phosphorylated T,s:Phosphorylated S DLGAP5 95797.9 2 15 355.1 348.78 HUMAN 1 -0.3065 -27.6129 QRLHRFDSQ______-p Q8TEB9;S314-p QRLHRFDSQ______ 0.909874857971449 0.0775875582668693 0.021 -0.196333333333333 0.804978983005306 14.727789139319 0.021 -0.196333333333333 0.830810739269381 0.0336682920757878 0.224217675439692 -2.82574898859543 Q8TEB9 RHBDD1 Q8TEB9.S314.p_RHBDD1 Q8TEB9_S314s _1_1_314_314 Q8TEB9 Q8TEB9|Q8TEB9-2 Rhomboid-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6883.6883.2 8.08 8.08 99 1 1 1 0 606.2909 1131.6108 S314s TMT10 309 (R) LHRFDsQ (-) LHRFDS(1.0)Q s:Phosphorylated S RHBDD1 36164.6 5 2 5314.1 20.68 HUMAN 1 0.805 -14.7278 QRLIRKDTPHYKKHF-p A0A0G2JPP5;T607-p QRLIRKDTPHYKKHF 0.118229246118795 0.00274324290825798 0.358 0.722333333333333 19.3041122852749 38.8082655000308 0.358 0.722333333333334 0.0117378558428715 0.00013157502160354 3.73117132601016 9.60804403413182 A0A0G2JPP5 SCRIB A0A0G2JPP5.T607.p_SCRIB A0A0G2JPP5_T607t _1_1_607_607 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9368.9368.4 10.54 10.54 5.346 2 1 1 0 510.3013 1958.2154 T607t TMT10 602 (R) LIRKDtPHYK (K) LIRKDT(0.99)PHY(0.0)K K:TMT10,t:Phosphorylated T SCRIB 178690.9 9 11 22.1 1004.81 HUMAN 1 19.3041 38.8083 QRLKIMEYYEKKEKQ-p P36543;Y56-p QRLKIMEYYEKKEKQ 0.518846820664332 0.374873665258011 0.0986666666666667 0.119666666666667 5.26470891915573 5.65610219803761 0.0986666666666666 0.119666666666667 0.297528866747367 0.27188783730911 1.1523536665008 1.2227742408924 P36543 ATP6V1E1 P36543.Y56.p_ATP6V1E1 P36543_Y56y _1_1_56_56 P36543 P36543|Q96A05|P36543-2|P36543-3 V-type proton ATPase subunit E 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.21122.21122.2 12.68 1.41 2.253 2 1 1 0 757.3752 1433.7751 Y56y TMT10 53 (K) IMEyYEK (K) IMEY(0.99)Y(0.0)EK K:TMT10,y:Phosphorylated Y ATP6V1E1 26201.9 2 1 277.1 12.68 HUMAN 1 5.2647 5.6561 QRLMKSESMPVQLNK-p Q92609-2;S522-p QRLMKSESMPVQLNK 0.189469922667285 0.339374953263171 0.392666666666667 -0.180333333333333 14.1401380885427 6.21681219869476 0.392666666666667 -0.180333333333333 0.0385466101166874 0.238956462368787 2.71868453149793 -1.32277099982056 Q92609 TBC1D5 Q92609.2.S522.p_TBC1D5 Q92609-2_S522s _1_1_522_522 Q92609-2 Q92609-2|C9J3F6 Isoform 2 of TBC1 domain family member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16824.16824.2 12.55 8.82 2.694 2 1 1 0 835.9333 1590.8926 S522s TMT10 520 (K) SEsMPVQLNK (G) S(0.0)ES(0.99)MPVQLNK K:TMT10,s:Phosphorylated S TBC1D5 91784.7 4 4 328.1 359.68 HUMAN 1 14.1401 -6.2168 QRLTHVDSPLEAPAG-p Q9BSJ8-2;S973-p QRLTHVDSPLEAPAG 0.395179917614244 0.175240222706845 -0.124666666666667 -0.178 7.44259736938375 9.94587295979727 -0.124666666666667 -0.178 0.180193973891633 0.101254120107447 -1.53828648981463 -1.97151584271881 Q9BSJ8 ESYT1 Q9BSJ8.2.S973.p_ESYT1 Q9BSJ8-2_S973s _1_1_973_973 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22087.22087.3 21.76 21.76 3.871 2 1 1 0 823.1158 2387.3699 S973s TMT10 968 (R) LTHVDsPLEAPAGPLGQVK (L) LT(0.0)HVDS(0.99)PLEAPAGPLGQVK K:TMT10,s:Phosphorylated S ESYT1 124514 6 8 400.1 328.2 HUMAN 1 -7.4426 -9.9459 QRLVSPGSANETSSI-p O75369-8;S2512-p QRLVSPGSANETSSI 0.709048635395475 0.241487746499877 0.0506666666666667 0.174 2.80695382553179 8.12893775559908 0.0506666666666667 0.174 0.523967822735862 0.153853090480945 0.680922077960232 1.65698658396515 O75369 FLNB O75369.8.S2512.p_FLNB O75369-8_S2512s _1_1_2512_2512 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|A0A0A0MT44 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28099.28099.2 15.1 12.08 1.836 7 1 1 0 1178.1008 2275.2343 S2512s TMT10 2507 (R) LVSPGsANETSSILVESVTR (S) LVS(0.0)PGS(0.99)ANET(0.0)S(0.0)S(0.0)ILVES(0.0)VT(0.0)R s:Phosphorylated S FLNB 283797.6 2 42 67.1 680.07 HUMAN 1 2.807 8.1289 QRMPRQPSATRLPKG-p Q6P582;S139-p QRMPRQPSATRLPKG 0.758803098663587 0.182636327869646 -0.056 -0.22 2.2967936354782 9.71348581674834 -0.056 -0.22 0.589278554858461 0.106819715838362 -0.573570172580176 -1.93121743384448 Q6P582 MZT2A Q6P582.S139.p_MZT2A Q6P582_S139s_1_1_139_139 Q6P582 B8ZZ87|Q6P582|Q6NZ67 Mitotic-spindle organizing protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11113.11113.2 9.68 4.98 2.544 2 1 1 0 645.3454 1226.7418 Q137q S139s Hydrogen 137 (R) qPsATRLPK (G) Q(1.0)PS(0.99)AT(0.0)RLPK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S MZT2A 16277.4 12 5 2354.1 86.87 HUMAN 1 -2.2968 -9.7135 QRNFSINSVASTYSE-p O43663-4;S574-p QRNFSINSVASTYSE 0.943864818517262 0.622228177881123 0.0123333333333333 0.114666666666667 0.49457959421044 2.79996555482286 0.0123333333333333 0.114666666666667 0.892363998035979 0.524811622669138 0.141805141540468 0.67938994187963 O43663 PRC1 O43663.4.S574.p_PRC1 O43663-4_S574sS577s_2_2_574_577 O43663-4 O43663-4|O43663-2 Isoform 4 of Protein regulator of cytokinesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30198.30198.3 15.4 15.4 1.109 6 2 2 0 727.9868 2022.013 S574s S577s TMT10 569 (R) NFSINsVAsTYSEFAR (E) NFS(0.0)INS(0.99)VAS(0.99)T(0.0)Y(0.0)S(0.0)EFAR s:Phosphorylated S PRC1 70874.5 1 16 715.2 238.03 HUMAN 1 0.4946 2.8 QRPGDPQSAQDKARM-p Q15637-6;S302-p QRPGDPQSAQDKARM 0.328559071142804 0.0737462611660232 0.225666666666667 0.338 9.04038778390813 15.0307760567417 0.225666666666667 0.338 0.124727213966203 0.0313994755499431 1.81535454458923 2.88233966046783 Q15637 SF1 Q15637.6.S302.p_SF1 Q15637-6_S302s _1_1_302_302 Q15637-6 Q15637|Q15637-2|Q15637-3|Q15637-7|Q15637-6|Q15637-4 Isoform 6 of Splicing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8645.8645.3 9.33 4.46 99 1 1 1 0 671.3371 1932.0339 S302s TMT10 294 (K) FQRPGDPQsAQDK (A) FQRPGDPQS(1.0)AQDK K:TMT10,s:Phosphorylated S SF1 62173.2 1 7 1138.1 173.35 HUMAN 1 9.0404 15.0308 QRPGSRVSPENLVDK-p O75376-2;S2017-p QRPGSRVSPENLVDK 0.74727420025728 0.381229610439034 0.045 0.117 2.40279073591971 5.56362147973607 0.045 0.117 0.575070283769896 0.277739629628604 0.596264214860589 1.20614797736692 O75376 NCOR1 O75376.2.S2017.p_NCOR1 O75376-2_S2017s _1_1_2017_2017 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19071.19071.3 10.42 7.48 99 1 1 1 0 513.6121 1458.8568 S2017s TMT10 2016 (R) VsPENLVDK (S) VS(1.0)PENLVDK K:TMT10,s:Phosphorylated S NCOR1 259453.1 5 27 35.1 889.74 HUMAN 1 2.4028 5.5636 QRPLLFASRRQSSAR-p O43194;S396-p QRPLLFASRRQSSAR 0.327502737509373 0.206812371215438 -0.156 -0.131 9.06772277428079 9.00360363658644 -0.156 -0.131 0.123944632059244 0.125788122906223 -1.82008680123273 -1.80833589257412 O43194 GPR39 O43194.S396.p_GPR39 O43194_S396s _1_1_396_396 O43194 O43194 G-protein coupled receptor 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21348.21348.3 9.03 9.03 99 1 1 1 0 548.3045 1562.9368 S396s TMT10 387 (R) FVQRPLLFAsR (R) FVQRPLLFAS(1.0)R s:Phosphorylated S GPR39 52012.5 2 1 4825.1 26.23 HUMAN 1 -9.0677 -9.0036 QRQKRLNSASQRSSS-p Q99550;S951-p QRQKRLNSASQRSSS 0.150283451076775 0.327168068270299 0.257333333333333 0.138 16.5972269928027 6.42416931748445 0.257333333333333 0.138 0.0218915897441275 0.227815394660562 3.18372075684711 1.35944556414913 Q99550 MPHOSPH9 Q99550.S951.p_MPHOSPH9 Q99550_S951s _1_1_951_951 Q99550 Q99550|Q99550-2|A0A0A0MTP3 M-phase phosphoprotein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3215.3215.3 7.83 2.04 7.828 2 1 1 0 414.2174 1160.6697 S951s TMT10 948 (K) RLNsASQR (S) RLNS(0.99)AS(0.0)QR s:Phosphorylated S MPHOSPH9 133763.4 1 5 1356.1 150.46 HUMAN 1 16.5972 6.4242 QRQLLTLSSELSQAR-p P15311;S535-p QRQLLTLSSELSQAR 0.152381872383781 0.085082810133772 -0.276666666666667 -0.202333333333333 16.4447042393012 14.1634562487595 -0.276666666666667 -0.202333333333333 0.0226740748555149 0.038340200096903 -3.15405068107803 -2.72132335420858 P15311 EZR P15311.S535.p_EZR P15311_S535s _1_1_535_535 P15311 P15311|E7EQR4 Ezrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18950.18950.4 17.71 17.71 1.133 4 1 1 0 657.3553 2546.4302 S535s TMT10 530 (R) QLLTLsSELSQARDENKR (T) QLLT(0.0)LS(0.99)S(0.0)ELS(0.0)QARDENKR K:TMT10,s:Phosphorylated S EZR 69525.7 8 5 2031.1 101.61 HUMAN 1 -16.4447 -14.1635 QRQLMNQSQNEELSP-p Q8IW35-2;S308-p QRQLMNQSQNEELSP 0.200797395490016 0.182158070199769 0.195333333333333 -0.194333333333333 13.5474435591842 9.72827384894917 0.195333333333333 -0.194333333333333 0.0441830450892601 0.106456605760346 2.61019711000763 -1.93378043623075 Q8IW35 CEP97 Q8IW35.2.S308.p_CEP97 Q8IW35-2_S308s _1_1_308_308 Q8IW35-2 Q8IW35-2|E9PG22 Isoform 2 of Centrosomal protein of 97 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24964.24964.3 19.81 19.81 5.322 3 1 1 0 874.434 2541.318 S308s TMT10 303 (R) QLMNQsQNEELSPLVPVETR (A) Q(0.0)LM(0.0)N(0.0)QS(0.99)QN(0.0)EELS(0.0)PLVPVET(0.0)R s:Phosphorylated S CEP97 100762.5 1 2 759.1 230.22 HUMAN 1 13.5474 -9.7283 QRQLSMSSADSADAK-p Q5JSZ5;S419-p QRQLSMSSADSADAK 0.00874686268802314 0.00195162346428314 -1.328 -0.877333333333333 49.9177957514277 42.4279412855937 -1.328 -0.877333333333333 1.01910850226635e-05 5.71749602629293e-05 -15.6848773482572 -11.2792181430885 Q5JSZ5 PRRC2B Q5JSZ5.S419.p_PRRC2B Q5JSZ5_S419s _1_1_419_419 Q5JSZ5 Q5JSZ5|Q5JSZ5-5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12579.12579.2 13.5 13.5 1.109 4 1 1 0 924.9446 1768.9151 S419s TMT10 414 (R) QLSMSsADSADAK (R) QLS(0.0)MS(0.0)S(0.99)ADS(0.0)ADAK K:TMT10,s:Phosphorylated S PRRC2B 244103.4 1 57 36.2 882.05 HUMAN 1 -49.9178 -42.4279 QRQLSSSSSYSGDIS-p P33527-9;S928-p QRQLSSSSSYSGDIS 0.42064448546641 0.630984865857374 0.125333333333333 0.055 6.93812582098641 2.71884860651634 0.125333333333333 0.055 0.202389239223893 0.534706100897768 1.45017806002871 0.662616826395809 P33527 ABCC1 P33527.9.S928.p_ABCC1 P33527-9_S928sS929s_2_2_928_929 P33527-9 P33527-9|P33527-3 Isoform 9 of Multidrug resistance-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12266.12681.2 12.9 12.9 1.129 8 2 2 0 931.8917 1702.8445 S928s S929s TMT10 923 (R) QLSSSssYSGDISR (H) QLS(0.0)S(0.0)S(0.0)S(0.99)S(0.99)Y(0.0)S(0.0)GDIS(0.0)R s:Phosphorylated S ABCC1 174063.4 1 6 3098.1 60.69 HUMAN 1 6.9381 2.7188 QRQTSNRSEPSGEIN-p P42695;S520-p QRQTSNRSEPSGEIN 0.11918102835135 0.00199803288244938 0.399666666666667 0.800666666666667 19.2202546500826 42.1859865524487 0.399666666666667 0.800666666666667 0.0119667036206644 6.04507014665904e-05 3.71357083297817 11.15966173369 P42695 NCAPD3 P42695.S520.p_NCAPD3 P42695_S520s _1_1_520_520 P42695 P42695|G3V1A9 Condensin-2 complex subunit D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10570.10570.3 17.33 17.33 1.119 8 1 1 0 1001.4579 2922.3874 S520s TMT10 515 (R) QTSNRsEPSGEINIDSSGETVGSGER (C) QT(0.0)S(0.0)NRS(0.99)EPS(0.0)GEINIDS(0.0)S(0.0)GET(0.0)VGS(0.0)GER s:Phosphorylated S NCAPD3 171055.8 1 1 1254.1 161.61 HUMAN 1 19.2203 42.186 QRRGRSRSPQRPGWS-p Q9UQ35;S536-p QRRGRSRSPQRPGWS 0.662515509657473 0.403259097387807 -0.0676666666666667 0.235333333333333 3.34823208793948 5.24633938098186 -0.0676666666666667 0.235333333333333 0.46256928429994 0.29879000249251 -0.790296602363726 1.14877350939253 Q9UQ35 SRRM2 Q9UQ35.S536.p_SRRM2 Q9UQ35_S536s _1_1_536_536 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5388.5388.3 11.21 11.21 11.208 2 1 1 0 460.5646 1299.7119 S536s TMT10 536 (R) sPQRPGWSR (S) S(0.99)PQRPGWS(0.0)R s:Phosphorylated S SRRM2 300351.7 2 19 2.1 3310.34 HUMAN 1 -3.3482 5.2463 QRRSCFESSPDPELK-p Q9UQ35;S875-p QRRSCFESSPDPELK 0.560135693219576 0.203816100144595 0.0916666666666667 0.125333333333333 4.64343333588471 9.08932803431396 0.0916666666666667 0.125333333333333 0.343286453843749 0.123329564114296 1.03829048124398 1.82316427316426 Q9UQ35 SRRM2 Q9UQ35.S875.p_SRRM2 Q9UQ35_S875sS876s_2_2_875_876 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15832.15832.2 11.98 10.92 3.231 3 2 2 0 892.8576 1624.7726 S875s S876s Hydrogen 871 (R) SCFEssPDPELK (S) S(0.0)CFES(0.99)S(0.99)PDPELK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 8 190 2.1 3310.34 HUMAN 1 4.6434 9.0893 QRRSLRLSAQKDLEQ-p Q9ULW0;S125-p QRRSLRLSAQKDLEQ 0.13388318606211 0.00112568182952083 -0.392333333333333 -1.137 17.9820440994171 49.0377419247269 -0.392333333333333 -1.137 0.0159145949645869 1.24803224876967e-05 -3.45863228058558 -15.0516920658445 Q9ULW0 TPX2 Q9ULW0.S125.p_TPX2 Q9ULW0_S125s _1_1_125_125 Q9ULW0 Q9ULW0-2 Targeting protein for Xklp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11607.11607.3 9.79 9.79 9.789 2 1 1 0 480.9495 1360.8677 S125s TMT10 121 (R) SLRLsAQK (D) S(0.0)LRLS(0.99)AQK K:TMT10,s:Phosphorylated S TPX2 86279.1 2 2 599.1 263.33 HUMAN 1 -17.982 -49.0377 QRRTAQASPNTELDF-p Q9UBS8;S162-p QRRTAQASPNTELDF 0.952442048084725 0.328751203387295 -0.00900000000000001 0.124333333333333 0.419607971226353 6.39826865365063 -0.00900000000000002 0.124333333333333 0.90790248098513 0.229178110578457 -0.121204813262427 1.35487251083869 Q9UBS8 RNF14 Q9UBS8.S162.p_RNF14 Q9UBS8_S162s _1_1_162_162 Q9UBS8 Q9UBS8|Q9UBS8-2 E3 ubiquitin-protein ligase RNF14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21858.21858.3 28.4 24.98 1.132 4 1 1 0 1110.8356 3250.5185 S162s TMT10 158 (R) TAQAsPNTELDFGGAAGSDVDQEEIVDER (A) T(0.0)AQAS(0.99)PNT(0.0)ELDFGGAAGS(0.0)DVDQEEIVDER s:Phosphorylated S RNF14 55662.2 2 1 2286.1 89.63 HUMAN 1 -0.4196 6.3983 QRSASQSSLDKLDQE-p O60271;S733-p QRSASQSSLDKLDQE 0.399843082349158 0.0664407546868785 -0.231 0.285333333333333 7.34743947148061 15.6623388051888 -0.231 0.285333333333333 0.184185761022832 0.027149767791854 -1.52170399773518 3.00155535972383 O60271 SPAG9 O60271.S733.p_SPAG9 O60271_S733s _1_1_733_733 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-9|O60271-3|O60271-5 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18208.18208.2 16.54 15.23 1.117 4 1 1 0 1208.6495 2336.3276 S733s TMT10 728 (R) SASQSsLDKLDQELK (E) S(0.0)AS(0.0)QS(0.0)S(0.99)LDKLDQELK K:TMT10,s:Phosphorylated S SPAG9 147001.6 7 35 84.1 629.25 HUMAN 1 -7.3474 15.6623 QRSASWGSADQLKEQ-p Q86VQ1;S226-p QRSASWGSADQLKEQ 0.91195125119209 0.755077531245582 0.017 0.0373333333333334 0.778826569151845 1.68639300158195 0.017 0.0373333333333334 0.835828822351738 0.678204551180401 0.217440584138715 0.43812622616432 Q86VQ1 GLCCI1 Q86VQ1.S226.p_GLCCI1 Q86VQ1_S226s _1_1_226_226 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16239.16239.3 10.58 10.58 3.058 3 1 1 0 563.2869 1607.8793 S226s TMT10 221 (R) SASWGsADQLK (E) S(0.0)AS(0.0)WGS(0.99)ADQLK K:TMT10,s:Phosphorylated S GLCCI1 58707.2 2 8 307.1 373.49 HUMAN 1 0.7788 1.6864 QRSHPAMSPGTPGPT-p Q8NFD5-3;S502-p QRSHPAMSPGTPGPT 0.717411591021387 0.261236325907508 0.0533333333333333 0.117 2.72168495171278 7.68079186722412 0.0533333333333333 0.117 0.534357002300384 0.170577134025086 0.663293378818882 1.57925289537565 Q8NFD5 ARID1B Q8NFD5.3.S502.p_ARID1B Q8NFD5-3_S502s _1_1_502_502 Q8NFD5-3 Q8NFD5-3|Q8NFD5-2 Isoform 3 of AT-rich interactive domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8025.8025.3 17.15 17.15 3.36 4 1 1 0 630.625 1809.8937 S502s TMT10 497 (R) SHPAMsPGTPGPTMGR (S) S(0.0)HPAMS(0.99)PGT(0.0)PGPT(0.0)MGR s:Phosphorylated S ARID1B 242543.1 6 4 656.1 253.59 HUMAN 1 2.7217 7.6808 QRSKTQLSPSIKRKR-p Q8NFC6;S3019-p QRSKTQLSPSIKRKR 0.15127853533293 0.00327985194850021 0.384666666666667 -0.919666666666667 16.5200098271303 37.2147980170828 0.384666666666667 -0.919666666666667 0.0222843010681669 0.000189897915831233 3.16868537328309 -8.94647398053411 Q8NFC6 BOD1L1 Q8NFC6.S3019.p_BOD1L1 Q8NFC6_S3019s _1_1_3019_3019 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12289.12289.3 12.9 8.65 2.41 4 1 1 0 619.3674 1776.1198 S3019s TMT10 3014 (R) SKTQLsPSIK (R) S(0.0)KT(0.0)QLS(0.99)PS(0.0)IK K:TMT10,s:Phosphorylated S BOD1L1 332628.7 11 26 97.1 603.4 HUMAN 1 16.52 -37.2148 QRSLEPGTPRWANYV-p P51570-2;T133-p QRSLEPGTPRWANYV 0.500286296002367 0.365983934919881 0.092 0.0963333333333333 5.54531335152014 5.78715802754699 0.092 0.0963333333333333 0.278912940822225 0.263805713493943 1.20311772627173 1.24626649682391 P51570 GALK1 P51570.2.T133.p_GALK1 P51570-2_T133t _1_1_133_133 P51570-2 P51570-2|K7ERJ9 Isoform 2 of Galactokinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7920.7920.2 10.74 6.14 6.752 2 1 1 0 583.2945 1085.6152 T133t TMT10 128 (R) SLEPGtPR (W) S(0.0)LEPGT(0.99)PR t:Phosphorylated T GALK1 45984.6 1 1 6592.1 10.74 HUMAN 1 5.5453 5.7872 QRSLQKLSSRQRRTK-p Q9NSY1;S979-p QRSLQKLSSRQRRTK 0.235718859550154 0.51215165669485 -0.208 -0.0826666666666666 12.0182950505343 3.89803801658488 -0.208 -0.0826666666666666 0.0628304969816631 0.407564358871319 -2.33558002436484 -0.897439456632186 Q9NSY1 BMP2K Q9NSY1.S979.p_BMP2K Q9NSY1_S979s _1_1_979_979 Q9NSY1 Q9NSY1|Q5H9B9 BMP-2-inducible protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8648.8648.3 7.03 4.81 1.322 3 1 1 0 486.2812 1376.8626 S979s TMT10 974 (R) SLQKLsSR (Q) S(0.0)LQKLS(0.99)S(0.0)R K:TMT10,s:Phosphorylated S BMP2K 130025 1 7 804.1 222.57 HUMAN 1 -12.0183 -3.898 QRSLSVLSPRQPAQN-p A0A087X1R1;S358-p QRSLSVLSPRQPAQN 0.808207657413422 0.00686971325246239 -0.0516666666666667 -0.692 1.77624758690352 31.0288800572503 -0.0516666666666667 -0.692 0.664316808865267 0.000789063572216746 -0.458659821734021 -6.74020503252858 A0A087X1R1 SMTN A0A087X1R1.S358.p_SMTN A0A087X1R1_S358s _1_1_358_358 A0A087X1R1 A0A087X1R1 Smoothelin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12750.12750.3 17.44 13.35 2.511 3 1 1 0 621.334 1782.0183 S358s TMT10 353 (R) SLSVLsPRQPAQNR (E) S(0.0)LS(0.0)VLS(0.99)PRQPAQNR s:Phosphorylated S SMTN 108527.2 3 6 826.1 217.61 HUMAN 1 -1.7762 -31.0289 QRSQMANSSREKIVI-p Q8N9B8-2;S380-p QRSQMANSSREKIVI 0.327394528659194 0.620749587807368 -0.361666666666667 -0.048 9.07437851863558 2.81587292696001 -0.361666666666667 -0.048 0.123754827212101 0.522892854750882 -1.82123907419286 -0.682666791047228 Q8N9B8 RASGEF1A Q8N9B8.2.S380.p_RASGEF1A Q8N9B8-2_S375sS380sS381s_3_3_375_381 Q8N9B8-2 Q8N9B8-2 Isoform 2 of Ras-GEF domain-containing family member 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28559.28559.4 10.11 2.48 0 3 3 3 0 834.6858 3094.8054 S375s S380s S381s N391n TMT10 375 (R) sQMANssREKIVIPVFnLFVK (D) S(1.0)QMAN(0.50)S(1.0)S(1.0)REKIVIPVFN(0.50)LFVK K:TMT10,s:Phosphorylated S,n:Deamidated RASGEF1A 56158.6 1 1 6691.1 10.11 HUMAN 1 -9.0744 -2.8159 QRSRSGSSPEVDSKS-p Q9UQ35;S1582-p QRSRSGSSPEVDSKS 0.0287007839003379 0.00297589273654222 0.640666666666667 0.920333333333333 36.0483282164328 38.0455255454081 0.640666666666667 0.920333333333333 0.000248408915249263 0.000156836609617276 8.50540670018763 9.28608329489671 Q9UQ35 SRRM2 Q9UQ35.S1582.p_SRRM2 Q9UQ35_S1582s _1_1_1582_1582 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7342.7761.2 10.13 5.91 1.373 4 1 1 0 765.8766 1450.779 S1582s TMT10 1579 (R) SGSsPEVDSK (S) S(0.0)GS(0.0)S(0.99)PEVDS(0.0)K K:TMT10,s:Phosphorylated S SRRM2 300351.7 3 107 2.1 3310.34 HUMAN 1 36.0483 38.0455 QRSVGRPSPLASGRR-p X6RAB3;S419-p QRSVGRPSPLASGRR 0.0745793811074775 0.215243537884541 0.365666666666667 0.131666666666667 24.1854632783274 8.77778677481335 0.365666666666667 0.131666666666667 0.0038146409989262 0.132501661009119 4.84039395328588 1.7692781686436 X6RAB3 NotFound X6RAB3.S419.p_NotFound X6RAB3_S419s _1_1_419_419 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6758.6758.3 8.67 5.6 3.023 3 1 1 0 498.2658 1412.8171 S419s TMT10 414 (R) SVGRPsPLASGR (R) S(0.0)VGRPS(0.99)PLAS(0.0)GR s:Phosphorylated S USP6NL 96835.5 3 1 364.1 342.41 HUMAN 1 24.1855 8.7778 QRTITNVSDEVSSEE-p Q8N3S3;S331-p QRTITNVSDEVSSEE 0.960719111754911 0.0957805260467767 0.00766666666666667 0.197333333333333 0.334011719556805 13.4695691605221 0.00766666666666666 0.197333333333333 0.925974075791201 0.044982447727241 0.0973216896645831 2.59454962763581 Q8N3S3 PHTF2 Q8N3S3.S331.p_PHTF2 Q8N3S3_S331sS335sS336s_3_3_331_336 Q8N3S3 Q8N3S3|Q8N3S3-2|Q8N3S3-3|Q8N3S3-4|Q8N3S3-7|Q8N3S3-5|Q8N3S3-6 Putative homeodomain transcription factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22527.22527.3 12.64 12.64 3.951 8 3 3 0 947.0597 2599.2573 S331s S335s S336s TMT10 326 (R) TITNVsDEVssEEGPETGYSLR (R) T(0.0)IT(0.0)NVS(0.99)DEVS(0.99)S(0.99)EEGPET(0.0)GY(0.0)S(0.0)LR s:Phosphorylated S PHTF2 89782.6 3 3 3885.1 41.39 HUMAN 1 0.334 13.4696 QRTPSTASAKTHARV-p Q9H6A9;S496-p QRTPSTASAKTHARV 0.0764855122454567 0.0728433953489068 0.360666666666667 0.208333333333333 23.9443412081278 15.1115269309316 0.360666666666667 0.208333333333333 0.00403242110581698 0.0308210412631543 4.78128423067199 2.89748643185892 Q9H6A9 PCNXL3 Q9H6A9.S496.p_PCNXL3 Q9H6A9_S496s _1_1_496_496 Q9H6A9 Q9H6A9|Q9H6A9-2 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5964.5964.2 9.25 4.74 2.203 4 1 1 0 650.8496 1220.7251 S496s TMT10 491 (R) TPSTAsAK (T) T(0.0)PS(0.0)T(0.0)AS(0.99)AK K:TMT10,s:Phosphorylated S PCNX3 224430.8 4 15 168.1 492.45 HUMAN 1 23.9443 15.1115 QRTRLLDSEIKIMKS-p P17980;S50-p QRTRLLDSEIKIMKS 0.9858344442218 0.901162671464613 0.003 -0.0123333333333333 0.12512538294374 0.632050533393584 0.00300000000000001 -0.0123333333333333 0.971599900607246 0.864559618181103 0.037278083981265 -0.178835322405769 P17980 PSMC3 P17980.S50.p_PSMC3 P17980_S50s _1_1_50_50 P17980 P17980|R4GNH3|E9PM69 26S proteasome regulatory subunit 6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20676.20676.2 9.14 2.82 99 1 1 1 0 678.3835 1275.7924 S50s TMT10 47 (R) LLDsEIK (I) LLDS(1.0)EIK K:TMT10,s:Phosphorylated S PSMC3 49488 1 2 2442.1 83.31 HUMAN 1 0.1251 -0.6321 QRTSRRWSRVDDLYT-p Q9Y3M8;S154-p QRTSRRWSRVDDLYT 0.206251830567921 0.102017438932645 0.233666666666667 0.206333333333333 13.258715174932 13.0944169684983 0.233666666666667 0.206333333333333 0.0472202717953022 0.0490408854763401 2.55779221326776 2.52669600030451 Q9Y3M8 STARD13 Q9Y3M8.S154.p_STARD13 Q9Y3M8_S154s _1_1_154_154 Q9Y3M8 Q9Y3M8|Q9Y3M8-2|Q9Y3M8-4|Q9Y3M8-3 StAR-related lipid transfer protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25634.25634.3 10.32 3.51 8.289 3 1 1 0 700.3703 2019.1337 S154s TMT10 152 (R) RWsRVDDLYTLLPR (G) RWS(0.99)RVDDLY(0.0)T(0.0)LLPR s:Phosphorylated S STARD13 126277.4 1 2 564.1 271.22 HUMAN 1 13.2587 13.0944 QRVERLGSLVAAEWR-p Q7Z6J9;S76-p QRVERLGSLVAAEWR 0.678002965067943 0.00194036235975101 -0.09 0.798 3.15851667893593 42.491988045717 -0.09 0.798 0.483223817646627 5.63379701593899e-05 -0.752428962582787 11.3110639939807 Q7Z6J9 TSEN54 Q7Z6J9.S76.p_TSEN54 Q7Z6J9_S76s _1_1_76_76 Q7Z6J9 Q7Z6J9|Q7Z6J9-2 tRNA-splicing endonuclease subunit Sen54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33350.33350.3 20.71 15.63 99 1 1 1 0 890.146 2588.4488 S76s TMT10 74 (R) LGsLVAAEWRPEEGFVELK (S) LGS(1.0)LVAAEWRPEEGFVELK K:TMT10,s:Phosphorylated S TSEN54 59331.7 2 1 2262.1 90.86 HUMAN 1 -3.1585 42.492 QRVKGNLTPLTGRNY-p O75683;T229-p QRVKGNLTPLTGRNY 0.0961571674234334 0.00106567586669276 0.611 -1.312 21.5775203767436 50.3301593600879 0.611 -1.312 0.00695421258056168 9.26795814894685e-06 4.22598185527901 -15.9179577456634 O75683 SURF6 O75683.T229.p_SURF6 O75683_T229t _1_1_229_229 O75683 O75683 Surfeit locus protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13708.13708.3 8.95 8.95 1.271 2 1 1 0 565.33 1614.0103 T229t TMT10 224 (R) VKGNLtPLTGR (N) VKGNLT(0.99)PLT(0.0)GR K:TMT10,t:Phosphorylated T SURF6 41563.8 1 4 2253.1 91.2 HUMAN 1 21.5775 -50.3302 QRVKRGTSPRPPEGG-p P21127;S752-p QRVKRGTSPRPPEGG 0.203968533214827 0.00703829897901429 -0.531333333333333 0.673666666666667 13.376435877603 30.8317291031257 -0.531333333333334 0.673666666666667 0.045957501732198 0.00082570913570441 -2.5791250900833 6.67825124048309 P21127 CDK11B P21127.S752.p_CDK11B P21127_T751tS752s_2_2_751_752 P21127 P21127|J3QR44|A0A0D9SEN2|Q9UQ88|A0A0D9SER5|P21127-2|B7ZVY7|P21127-3|Q9UQ88-2|Q9UQ88-3|Q5QPR3 Cyclin-dependent kinase 11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17591.17591.5 18.05 14.11 11.035 4 2 2 0 607.4963 2873.5158 T751t S752s TMT10 749 (K) RGtsPRPPEGGLGYSQLGDDDLK (E) RGT(0.99)S(0.99)PRPPEGGLGY(0.0)S(0.0)QLGDDDLK K:TMT10,t:Phosphorylated T,s:Phosphorylated S CDK11B 92876.5 6 12 421.1 320.22 HUMAN 1 -13.3764 30.8317 QRVKRTHSQGGYGSQ-p K7ER00;S341-p QRVKRTHSQGGYGSQ 0.297184072075513 0.00714231278100688 -0.268666666666667 -0.48 9.92570998973796 30.7131125387608 -0.268666666666667 -0.48 0.101725305085849 0.00084857209516103 -1.96880657995395 -6.64120056007292 K7ER00 NotFound K7ER00.S341.p_NotFound K7ER00_S341s _1_1_341_341 K7ER00 K7ER00|Q9Y285|Q9Y285-2 Phenylalanine--tRNA ligase alpha subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5610.5610.3 15.97 15.97 2.258 5 1 1 0 636.6405 1827.939 S341s TMT10 339 (R) THsQGGYGSQGYK (Y) T(0.0)HS(0.99)QGGY(0.0)GS(0.0)QGY(0.0)K K:TMT10,s:Phosphorylated S FARSA 62451.2 4 3 2453.1 82.83 HUMAN 1 -9.9257 -30.7131 QRVQAMKSPDHNGED-p Q05209;S19-p QRVQAMKSPDHNGED 0.726935837841591 0.737016495021713 0.0503333333333333 -0.0326666666666667 2.62576089300556 1.82761891135758 0.0503333333333333 -0.0346002717694687 0.546290830202194 0.65650510702704 0.643318247608562 -0.470226398740566 Q05209 PTPN12 Q05209.S19.p_PTPN12 Q05209_S19s _1_1_19_19 Q05209 Q05209 Tyrosine-protein phosphatase non-receptor type 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10022.10022.3 14.78 14.78 99 1 1 1 0 818.7249 2374.1974 S19s TMT10 14 (R) VQAMKsPDHNGEDNFAR (D) VQAMKS(1.0)PDHNGEDNFAR K:TMT10,s:Phosphorylated S PTPN12 88960.6 2 1 644.1 254.82 HUMAN 1 2.6258 -1.8276 QRVQRPHSSPPRFVT-p E9PJ55;S55-p QRVQRPHSSPPRFVT 0.306735184126758 0.0751062998794089 0.148666666666667 0.211666666666667 9.60158527524676 14.9226427233118 0.148666666666667 0.211666666666667 0.109607802929586 0.0321910933646024 1.91256742815042 2.86209946820179 E9PJ55 NotFound E9PJ55.S55.p_NotFound E9PJ55_S55s _1_1_55_55 E9PJ55 E9PJ55|Q9NUJ3|E9PMB0 T-complex protein 11-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3009.3009.3 9.87 9.87 1.104 2 1 1 0 490.5908 1389.7912 S55s TMT10 50 (R) VQRPHsSPPR (F) VQRPHS(0.99)S(0.0)PPR s:Phosphorylated S TCP11L1 67865.3 5 3 2770.1 71.23 HUMAN 1 9.6016 14.9226 QRVSDQNSPVLPKKS-p Q9UPU5;S2047-p QRVSDQNSPVLPKKS 0.479458929562861 0.993013139591743 -0.119333333333333 0.00100000000000002 5.87634611158206 0.043120147534786 -0.119333333333333 0.00100000000000003 0.258443366076785 0.99012034672598 -1.26250420002059 0.0129637628361304 Q9UPU5 USP24 Q9UPU5.S2047.p_USP24 Q9UPU5_S2047s _1_1_2047_2047 Q9UPU5 Q9UPU5 Ubiquitin carboxyl-terminal hydrolase 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14907.14907.2 15.56 8.75 4.487 2 1 1 0 861.4656 1641.9576 S2047s TMT10 2042 (R) VSDQNsPVLPK (K) VS(0.0)DQNS(0.99)PVLPK K:TMT10,s:Phosphorylated S USP24 297383.8 12 134 8.4 1346.57 HUMAN 1 -5.8763 0.0431 QRWESSASFDLKQQL-p Q6ZSZ5;S1076-p QRWESSASFDLKQQL 0.140818172070489 0.0673698167017742 -0.367333333333333 -0.268333333333333 17.4001242740285 15.5852557512524 -0.367333333333333 -0.268333333333333 0.0181964878833733 0.0276359516929289 -3.34186297844038 -2.98691098416595 Q6ZSZ5 ARHGEF18 Q6ZSZ5.S1076.p_ARHGEF18 Q6ZSZ5_S1076s _1_1_1076_1076 Q6ZSZ5 Q6ZSZ5|Q6ZSZ5-2 Rho guanine nucleotide exchange factor 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23269.23269.2 14.22 10.52 1.165 3 1 1 0 854.4253 1627.8732 S1076s TMT10 1071 (R) WESSAsFDLK (Q) WES(0.0)S(0.0)AS(0.99)FDLK K:TMT10,s:Phosphorylated S ARHGEF18 131234.5 2 6 799.1 223.19 HUMAN 1 -17.4001 -15.5853 QSAFAGFSFVNPKFE-p Q05655-2;S695-p QSAFAGFSFVNPKFE 0.676492954068529 0.0371290854143326 0.0566666666666667 0.296333333333333 3.17937074954336 19.2284195193888 0.0566666666666667 0.296333333333333 0.480909022441193 0.0119442269862579 0.756614890555961 3.71197890274744 Q05655 PRKCD Q05655.2.S695.p_PRKCD Q05655-2_S695s _1_1_695_695 Q05655-2 Q05655-2 Isoform 2 of Protein kinase C delta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36602.36602.4 22.37 22.9 2.454 3 1 1 0 903.1908 3529.7714 S695s TMT10 681 (K) NLIDSMDQSAFAGFsFVNPKFEHLLED (-) NLIDS(0.0)MDQS(0.0)AFAGFS(0.99)FVNPKFEHLLED K:TMT10,s:Phosphorylated S PRKCD 82263.9 24 12 687.1 243.52 HUMAN 1 3.1794 19.2284 QSAQSQRSPSELFAQ-p Q9Y2W1;S622-p QSAQSQRSPSELFAQ 0.932912367132036 0.0997097257567618 0.0206666666666667 0.27 0.594773700452679 13.23458277709 0.0206666666666667 0.27 0.87201233839586 0.0474833905628459 0.168896122850863 2.5519941672905 Q9Y2W1 THRAP3 Q9Y2W1.S622.p_THRAP3 Q9Y2W1_S622s _1_1_622_622 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25029.25029.4 24.24 22.4 1.123 3 1 1 0 645.8585 2500.444 S622s TMT10 622 (R) sPSELFAQHIVTIVHHVK (E) S(0.99)PS(0.0)ELFAQHIVT(0.0)IVHHVK K:TMT10,s:Phosphorylated S THRAP3 108720.9 3 78 10.2 1293.04 HUMAN 1 0.5948 13.2346 QSARRKRSYKQAVSE-p Q9NQS7;S452-p QSARRKRSYKQAVSE 0.113128338411947 0.0112762247632133 0.496 -0.458666666666667 19.7472478868947 27.2749024577634 0.496 -0.458666666666667 0.0105992518430205 0.00187287914727971 3.82491578754701 -5.63610480667298 Q9NQS7 INCENP Q9NQS7.S452.p_INCENP Q9NQS7_S452s _1_1_452_452 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16179.16179.5 9.02 9.02 1.15 3 1 1 0 785.0077 3841.0335 S452s TMT10 450 (R) KRsYKQAVSELDEEQHLEDEELQPPR (S) KRS(0.99)Y(0.0)KQAVS(0.0)ELDEEQHLEDEELQPPR K:TMT10,s:Phosphorylated S INCENP 105826.3 1 18 138.1 524.38 HUMAN 1 19.7472 -27.2749 QSATNLESEEDSEAP-p Q2KHR3;S987-p QSATNLESEEDSEAP 0.170786714243967 0.020379930359248 -0.229333333333333 -0.348666666666667 15.3144040567895 23.1478479631623 -0.229333333333333 -0.348666666666667 0.0294143729300841 0.00484412346449732 -2.93762855714436 -4.58428870018084 Q2KHR3 QSER1 Q2KHR3.S987.p_QSER1 Q2KHR3_S987s _1_1_987_987 Q2KHR3 Q2KHR3|Q2KHR3-2 Glutamine and serine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12681.12681.3 15.74 15.74 2.28 6 1 1 0 1096.1847 3206.5813 S987s TMT10 979 (K) KQSATNLEsEEDSEAPVDSTLNNNR (N) KQS(0.0)AT(0.0)NLES(0.99)EEDS(0.0)EAPVDS(0.0)T(0.0)LNNNR K:TMT10,s:Phosphorylated S QSER1 190710.4 3 5 748.1 232.52 HUMAN 1 -15.3144 -23.1478 QSCPGSLSLCAGVKS-p Q9UQ35;S1034-p QSCPGSLSLCAGVKS 0.298583715457429 0.0811012265203804 0.164666666666667 0.382333333333333 9.86645705023945 14.4649941003719 0.164666666666667 0.382333333333333 0.103122704656153 0.0357684886469449 1.95851855814195 2.77696622323024 Q9UQ35 SRRM2 Q9UQ35.S1034.p_SRRM2 Q9UQ35_S1034s _1_1_1034_1034 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19529.19529.4 17.6 17.6 2.243 5 1 1 0 715.8767 2780.5253 S1034s TMT10 1021 (K) SKDSLVQSCPGSLsLCAGVK (S) S(0.0)KDS(0.0)LVQS(0.0)CPGS(0.0)LS(0.99)LCAGVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SRRM2 300351.7 1 52 2.1 3310.34 HUMAN 1 9.8665 14.465 QSCTETGSENENVSL-p P50851;S1568-p QSCTETGSENENVSL 0.959496875325329 0.0572605133020844 -0.00933333333333333 0.269333333333333 0.347585208148554 16.5501951810881 -0.00933333333333334 0.269333333333333 0.923084543838283 0.0221299525070271 -0.101135624800012 3.17222175551261 P50851 LRBA P50851.S1568.p_LRBA P50851_S1568s _1_1_1568_1568 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28069.28069.4 28.94 28.94 1.164 18 1 1 0 1207.7921 4748.1802 S1568s TMT10 1559 (R) HSQSCTETGsENENVSLSEITPAAFSTLTTASVEESESTSSAR (R) HS(0.0)QS(0.0)CT(0.0)ET(0.0)GS(0.99)ENENVS(0.0)LS(0.0)EIT(0.0)PAAFS(0.0)T(0.0)LT(0.0)T(0.0)AS(0.0)VEES(0.0)ES(0.0)T(0.0)S(0.0)S(0.0)AR C:Carbamidomethylation,s:Phosphorylated S LRBA 321783.7 3 16 74.1 649.16 HUMAN 1 -0.3476 16.5502 QSDDIEASRMKRAAA-p Q05086;S22-p QSDDIEASRMKRAAA 0.412161436237322 0.126427538931054 0.120666666666667 0.410333333333333 7.09848232097571 11.8410854565679 0.120666666666667 0.410333333333333 0.195052610861868 0.0654472577620119 1.47824125162401 2.30304766250253 Q05086 UBE3A Q05086.S22.p_UBE3A Q05086_S11sS16sS22s_3_3_11_22 Q05086 Q05086 Ubiquitin-protein ligase E3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.41160.41292.5 7.52 1 1.844 4 3 3 0 924.4444 4378.3206 S11s S16s S22s Acetyl 2 (M) EKLHQCYWKsGEPQsDDIEAsRMKRAAAK (H) EKLHQCY(0.0)WKS(0.99)GEPQS(0.99)DDIEAS(0.99)RMKRAAAK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S UBE3A 101655.7 1 3 4183.1 35.77 HUMAN 1 7.0985 11.8411 QSDGQTGSPQNSNSS-p Q76L83;S224-p QSDGQTGSPQNSNSS 0.800325882980012 0.0712663647211237 0.0373333333333333 0.288666666666667 1.86288687565714 15.2508046320201 0.0373333333333333 0.288666666666667 0.651195382560063 0.0298482955825623 0.478218602325826 2.92367641306049 Q76L83 ASXL2 Q76L83.S224.p_ASXL2 Q76L83_S224s _1_1_224_224 Q76L83 Q76L83|E7EWD6 Putative Polycomb group protein ASXL2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10290.10290.2 20.65 18.65 2.284 9 1 1 0 1334.1202 2587.2636 S224s TMT10 217 (K) QSDGQTGsPQNSNSSFSSSVK (V) QS(0.0)DGQT(0.0)GS(0.99)PQNS(0.0)NS(0.0)S(0.0)FS(0.0)S(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S ASXL2 155129.4 6 4 293.1 380.51 HUMAN 1 1.8629 15.2508 QSDSSEESEEEKPPE-p P35269;S311-p QSDSSEESEEEKPPE 0.0926681628012438 0.0017724175152835 -0.577 1.571 21.9928803574054 43.4188450024146 -0.577 1.571 0.00631992557944908 4.55109079416505e-05 -4.32030140795153 11.7814013950376 P35269 GTF2F1 P35269.S311.p_GTF2F1 P35269_S307sS308sS311s_3_3_307_311 P35269 P35269 General transcription factor IIF subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12760.12760.5 16.83 16.83 2.185 4 3 3 0 882.5826 4168.9711 S307s S308s S311s TMT10 300 (K) GVDEQSDssEEsEEEKPPEEDKEEEEEK (K) GVDEQS(0.0)DS(0.99)S(0.99)EES(0.99)EEEKPPEEDKEEEEEK K:TMT10,s:Phosphorylated S GTF2F1 58296.5 2 18 1159.1 171.17 HUMAN 1 -21.9929 43.4188 QSEAKVVSQYHELVV-p Q16891-2;S345-p QSEAKVVSQYHELVV 0.405429137069245 0.0131588910628106 0.193 0.405 7.24122500604362 26.1950873925506 0.193 0.405 0.188745888212829 0.00240154794134221 1.50317581428938 5.34587208185796 Q16891 IMMT Q16891.2.S345.p_IMMT Q16891-2_S345s _1_1_345_345 Q16891-2 Q16891|Q16891-4|Q16891-2|Q16891-3 Isoform 2 of MICOS complex subunit MIC60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16766.16766.3 11.07 11.07 11.071 2 1 1 0 612.9924 1756.9907 S345s TMT10 343 (K) VVsQYHELVVQAR (D) VVS(0.99)QY(0.0)HELVVQAR s:Phosphorylated S IMMT 83022.6 1 8 1057.1 182.65 HUMAN 1 7.2412 26.1951 QSEKLLDSDSHTGKA-p Q8TF40;S714-p QSEKLLDSDSHTGKA 0.815451491549817 0.239829294857222 0.0396666666666667 0.263333333333333 1.7009681722124 8.17022871770811 0.0396666666666667 0.263333333333333 0.675932273087044 0.152397249289397 0.441511493203773 1.66413915201443 Q8TF40 FNIP1 Q8TF40.S714.p_FNIP1 Q8TF40_S714s _1_1_714_714 Q8TF40 Q8TF40|Q8TF40-3|J3KNG8|A0A087WX11 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10684.10684.3 12.41 12.41 1.935 3 1 1 0 537.6118 1530.8528 S714s TMT10 711 (K) LLDsDSHTGK (A) LLDS(0.99)DS(0.0)HT(0.0)GK K:TMT10,s:Phosphorylated S FNIP1 132549.9 2 17 310.1 372.19 HUMAN 1 1.701 8.1702 QSEMEFSSLQDMPKE-p Q8N163;S687-p QSEMEFSSLQDMPKE 0.119734359453001 0.958142892044927 -0.303 -0.012 19.1800624630358 0.267431969838425 -0.303 -0.012 0.0120779646367347 0.940279143423007 -3.70515059407526 -0.0784563813898239 Q8N163 CCAR2 Q8N163.S687.p_CCAR2 Q8N163_S687s_1_1_687_687 Q8N163 Q8N163|Q8N163-2|G3V119|A0A087X2B6 Cell cycle and apoptosis regulator protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17018.17018.3 11.75 11.75 1.108 5 1 1 0 895.745 2573.2628 M683m S687s M691m TMT10 675 (R) SVASNQSEmEFSsLQDmPK (E) S(0.0)VAS(0.0)NQS(0.0)EM(1.0)EFS(0.0)S(0.99)LQDM(1.0)PK K:TMT10,m:Oxidized methionine,s:Phosphorylated S CCAR2 103527.3 1 8 891.1 204.52 HUMAN 1 -19.1801 -0.2674 QSESGRLSLGASRGS-p O43318;S367-p QSESGRLSLGASRGS 0.638073024503197 0.196684952263798 0.072 -0.233 3.64078434390665 9.28994319101519 0.072 -0.233 0.432435725286434 0.117762137759343 0.847810656756781 -1.85787377397897 O43318 MAP3K7 O43318.S367.p_MAP3K7 O43318_S367s _1_1_367_367 O43318 O43318|O43318-2|O43318-3|O43318-4|Q9UG54 Mitogen-activated protein kinase kinase kinase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7094.7094.3 12.77 12.77 1.183 4 1 1 0 595.6336 1704.919 S367s TMT10 359 (K) QQSESGRLsLGASR (G) QQS(0.0)ES(0.0)GRLS(0.99)LGAS(0.0)R s:Phosphorylated S MAP3K7 67936.6 2 2 1139.1 173.29 HUMAN 1 3.6408 -9.2899 QSFDDNDSEELEDKD-p O60841;S113-p QSFDDNDSEELEDKD 0.578040886243326 0.931159752950531 -0.0756666666666667 -0.012 4.37903037113947 0.435548309611122 -0.0756666666666667 -0.012 0.364835392915229 0.904576225108171 -0.988922991455342 -0.125597530514314 O60841 EIF5B O60841.S113.p_EIF5B O60841_S113s _1_1_113_113 O60841 O60841|A0A087WUT6 Eukaryotic translation initiation factor 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13385.13385.3 20.42 20.42 6.286 3 1 1 0 923.4306 2688.3091 S113s TMT10 106 (K) QSFDDNDsEELEDKDSK (S) QS(0.0)FDDNDS(0.99)EELEDKDS(0.0)K K:TMT10,s:Phosphorylated S EIF5B 139280.8 26 4 113.1 571.22 HUMAN 1 -4.379 -0.4355 QSGDGSLSPQAEAIE-p Q96NY7;S305-p QSGDGSLSPQAEAIE 0.408884674050016 0.0726907471264045 0.135666666666667 0.205666666666667 7.1660449724612 15.1313295857989 0.135666666666667 0.205666666666667 0.192041682736362 0.0306808255589494 1.49004835412672 2.90120510631906 Q96NY7 CLIC6 Q96NY7.S305.p_CLIC6 Q96NY7_S305s _1_1_305_305 Q96NY7 Q96NY7|Q96NY7-2 Chloride intracellular channel protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21743.21743.3 19.29 19.29 1.204 5 1 1 0 1065.1686 3113.5184 S305s TMT10 292 (R) VSGEPQQSGDGSLsPQAEAIEVAAGESAGR (S) VS(0.0)GEPQQS(0.0)GDGS(0.0)LS(0.99)PQAEAIEVAAGES(0.0)AGR s:Phosphorylated S CLIC6 73238.4 2 3 1280.1 158.88 HUMAN 1 7.166 15.1313 QSGPKACSVEELYAI-p Q9H792;S792-p QSGPKACSVEELYAI 0.351928236415973 0.165962175276999 0.130333333333333 0.153 8.42296087349593 10.2562574512978 0.130333333333333 0.153 0.14378179881523 0.094270162318688 1.70846558899669 2.0254255814197 Q9H792 PEAK1 Q9H792.S792.p_PEAK1 Q9H792_S792s _1_1_792_792 Q9H792 Q9H792|H0YN99 Pseudopodium-enriched atypical kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25109.25109.3 21.31 17.52 6.064 2 1 1 0 829.411 2406.2627 S792s TMT10 790 (K) ACsVEELYAIPPDADVAK (S) ACS(0.99)VEELY(0.0)AIPPDADVAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PEAK1 195156.9 2 7 583.1 265.81 HUMAN 1 8.423 10.2563 QSGPLTRSPQALSNG-p Q8NC74;S487-p QSGPLTRSPQALSNG 0.737147411232257 0.557370223474241 0.073 0.114333333333333 2.50879419037136 3.42225087202773 0.073 0.114333333333333 0.561203771467434 0.454752308927233 0.618746462388464 0.804823063698851 Q8NC74 RBBP8NL Q8NC74.S487.p_RBBP8NL Q8NC74_S487s_1_1_487_487 Q8NC74 Q8NC74 RBBP8 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6863.6863.2 13.78 13.78 7.751 3 1 1 0 656.8218 1231.6844 S487s N493n Hydrogen 487 (R) sPQALSnGTK (G) S(0.99)PQALS(0.0)N(1.0)GT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated RBBP8NL 71886.7 3 14 565.1 270.89 HUMAN 1 2.5088 3.4223 QSGTSVGTDEESDVT-p P49792;T2293-p QSGTSVGTDEESDVT 0.541115801504562 0.413415515547073 0.125 0.187 4.91920767589597 5.10308668119 0.125 0.187 0.322165649464351 0.308809983293288 1.0892314753123 1.12268525454704 P49792 RANBP2 P49792.T2293.p_RANBP2 P49792_T2293t _1_1_2293_2293 P49792 P49792|A0A1W2PNU4|P0DJD0 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12093.12352.3 23.38 23.38 2.75 6 1 1 0 907.0646 2639.2118 T2293t TMT10 2284 (K) LNQSGTSVGtDEESDVTQEEER (D) LNQS(0.0)GT(0.0)S(0.0)VGT(0.99)DEES(0.0)DVT(0.0)QEEER t:Phosphorylated T RANBP2 362585.9 2 48 9.1 1298.62 HUMAN 1 4.9192 5.1031 QSHSGSISPYPKVKA-p Q9UQ35;S994-p QSHSGSISPYPKVKA 0.660154229134287 0.388266785297332 -0.0776666666666667 0.088 3.37910107482983 5.46191504167622 -0.0776666666666667 0.088 0.459293069852817 0.284320710561898 -0.796414106304364 1.1878141435304 Q9UQ35 SRRM2 Q9UQ35.S994.p_SRRM2 Q9UQ35_S994s _1_1_994_994 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7881.7881.3 18.44 15.11 2.209 5 1 1 0 609.3137 1745.9587 S994s TMT10 987 (R) QSHSGSIsPYPK (V) QS(0.0)HS(0.0)GS(0.0)IS(0.99)PY(0.0)PK K:TMT10,s:Phosphorylated S SRRM2 300351.7 12 46 2.1 3310.34 HUMAN 1 -3.3791 5.4619 QSIDSEDSFVPGRRA-p Q8WZ73;S232-p QSIDSEDSFVPGRRA 0.686280163873028 0.252845490518138 0.0616666666666667 0.217 3.0679499935827 7.86457418302343 0.0616666666666667 0.217 0.49340665243834 0.163509346088532 0.734180236081368 1.61115716410385 Q8WZ73 RFFL Q8WZ73.S232.p_RFFL Q8WZ73_S229sS232s_2_2_229_232 Q8WZ73 Q8WZ73|Q8WZ73-2 E3 ubiquitin-protein ligase rififylin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20781.20781.3 17.14 14.72 2.101 4 2 2 0 856.3674 2407.1462 S229s S232s TMT10 218 (R) VPAEDETQSIDsEDsFVPGR (R) VPAEDET(0.0)QS(0.0)IDS(0.99)EDS(0.99)FVPGR s:Phosphorylated S RFFL 41768.5 6 4 2231.1 92.49 HUMAN 1 3.0679 7.8646 QSILTGESVSVIKHT-p P16615;S184-p QSILTGESVSVIKHT 0.226926079198749 0.551243159507369 -0.304 0.0856666666666667 12.3772851334466 3.48312371194657 -0.304 0.0856666666666667 0.0578457540434227 0.448422740808629 -2.39943882783615 0.816816570989991 P16615 ATP2A2 P16615.S184.p_ATP2A2 P16615_S184s _1_1_184_184 P16615 P16615 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25699.25699.3 8.38 10.07 1.79 4 1 1 0 705.0576 2033.1894 S184s TMT10 175 (R) VDQSILTGEsVSVIK (H) VDQS(0.0)ILT(0.0)GES(0.99)VS(0.0)VIK K:TMT10,s:Phosphorylated S ATP2A2 116409.4 1 2 1240.1 162.94 HUMAN 1 -12.3773 3.4831 QSIPRSASYPCAAPR-p Q7Z3C6;S761-p QSIPRSASYPCAAPR 0.318913492023343 0.137322153551013 0.224333333333333 -0.173666666666667 9.28940882388801 11.3615850443014 0.224333333333333 -0.173666666666667 0.117776628407844 0.0730872288386492 1.85847324822943 -2.21854318405897 Q7Z3C6 ATG9A Q7Z3C6.S761.p_ATG9A Q7Z3C6_S761s _1_1_761_761 Q7Z3C6 Q7Z3C6|Q7Z3C6-2 Autophagy-related protein 9A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12442.12442.4 16.51 15.04 1.111 5 1 1 0 727.8477 2828.41 S761s TMT10 759 (R) SAsYPCAAPRPGAPETTALHGGFQR (R) S(0.0)AS(0.99)Y(0.0)PCAAPRPGAPET(0.0)T(0.0)ALHGGFQR C:Carbamidomethylation,s:Phosphorylated S ATG9A 95415.3 1 5 1664.1 122.57 HUMAN 1 9.2894 -11.3616 QSIQRNMSAMERFRN-p Q92747;S298-p QSIQRNMSAMERFRN 0.0548133552132231 0.428466146337461 0.425666666666667 0.08 27.4667924458946 4.90014642837746 0.425666666666667 0.08 0.00179192882425152 0.323582746706881 5.69691371927402 1.08551155958963 Q92747 ARPC1A Q92747.S298.p_ARPC1A Q92747_S298s _1_1_298_298 Q92747 A0A1W2PNV4|Q92747|Q92747-2 Actin-related protein 2/3 complex subunit 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8407.8407.2 9.12 5.16 99 1 1 1 0 574.2458 1067.5175 S298s TMT10 296 (R) NMsAMER (F) NMS(1.0)AMER s:Phosphorylated S ARPC1A 42139.1 1 2 4422.1 31.68 HUMAN 1 27.4668 4.9001 QSKLDCRSPVGLDCC-p Q99576-3;S10-p QSKLDCRSPVGLDCC 0.340652587960436 0.0789638563832102 -0.144 0.201333333333333 8.69750045533483 14.6332472085355 -0.144 0.201333333333333 0.134973949007959 0.0344092557447202 -1.75599968015438 2.80816746439632 Q99576 TSC22D3 Q99576.3.S10.p_TSC22D3 Q99576-3_S10s _1_1_10_10 Q99576-3 Q99576-3 Isoform 2 of TSC22 domain family protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16095.16095.4 18.92 18.92 99 1 1 1 0 725.8125 2820.2669 S10s TMT10 6 (K) LDCRsPVGLDCCNCCLDLAHR (S) LDCRS(1.0)PVGLDCCNCCLDLAHR C:Carbamidomethylation,s:Phosphorylated S TSC22D3 22669.2 1 1 2467.1 82.09 HUMAN 1 -8.6975 14.6332 QSKRGILTLKYPIEH-p P62736;T68-p QSKRGILTLKYPIEH 0.133326246106049 0.11945348823366 -0.314333333333333 0.237 18.0274027225068 12.1699907729521 -0.314333333333333 0.237 0.0157492445896216 0.0606737618665706 -3.46781318781549 2.36132507827212 P62736 ACTA2 P62736.T68.p_ACTA2 P62736_T68t _1_1_68_68 P62736 P68133|P62736|P68032|P63267|A6NL76|B8ZZJ2|F8WB63 Actin, aortic smooth muscle HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30908.30908.4 12.15 7.78 1.1 3 1 1 0 781.9095 3044.6531 T68t Hydrogen 65 (R) GILtLKYPIEHGIITNWDDMEK (I) GILT(0.99)LKY(0.0)PIEHGIIT(0.0)NWDDMEK K:TMT10-Lys-Only,t:Phosphorylated T ACTA2 42407.6 4 5 1233.2 163.71 HUMAN 1 -18.0274 12.17 QSKRPRLSVDDNDWE-p Q9NSI6-2;S2214-p QSKRPRLSVDDNDWE 0.13430679397205 0.0184255531712763 -0.254 -0.383666666666667 17.894816891089 23.8704256442098 -0.254 -0.383666666666667 0.0162374681007718 0.004101639015904 -3.4410094887836 -4.75767097791167 Q9NSI6 BRWD1 Q9NSI6.2.S2214.p_BRWD1 Q9NSI6-2_S2214s _1_1_2214_2214 Q9NSI6-2 Q9NSI6-2 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19316.19316.3 10.74 10.74 10.743 2 1 1 0 915.7798 2665.3622 S2214s TMT10 2210 (K) RPRLsVDDNDWEDLDYAK (S) RPRLS(0.99)VDDNDWEDLDY(0.0)AK K:TMT10,s:Phosphorylated S BRWD1 259915.1 1 26 208.1 444.81 HUMAN 1 -17.8948 -23.8704 QSKSLHLSPQEQSAS-p Q9H410;S81-p QSKSLHLSPQEQSAS 0.534705148071304 0.0200356433418179 0.0873333333333333 -0.336 5.03426830520417 23.2828251445709 0.0873333333333333 -0.336 0.313742367548855 0.00469588535508108 1.11033427319063 -4.61635445410805 Q9H410 DSN1 Q9H410.S81.p_DSN1 Q9H410_S81s _1_1_81_81 Q9H410 Q9H410|Q9H410-4 Kinetochore-associated protein DSN1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9067.9067.4 16.39 16.39 5.56 5 1 1 0 578.5313 2231.1366 S81s TMT10 77 (K) SLHLsPQEQSASYQDRR (Q) S(0.0)LHLS(0.99)PQEQS(0.0)AS(0.0)Y(0.0)QDRR s:Phosphorylated S DSN1 40408.8 8 4 1406.1 145.92 HUMAN 1 5.0343 -23.2828 QSKSNEDSLILEKSQ-p A0A0U1RRH6;S302-p QSKSNEDSLILEKSQ 0.495458193368512 0.00307215042650611 -0.112 -0.633 5.61895041514144 37.75359385456 -0.112 -0.633 0.274223682425258 0.000167741535626785 -1.21637235706679 -9.16544666126674 A0A0U1RRH6 NotFound A0A0U1RRH6.S302.p_NotFound A0A0U1RRH6_S302s _1_1_302_302 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18901.18901.2 13.36 6.64 3.777 2 1 1 0 843.4409 1605.91 S302s TMT10 298 (K) SNEDsLILEK (S) S(0.0)NEDS(0.99)LILEK K:TMT10,s:Phosphorylated S PHF14 109152.4 2 11 126.1 543.2 HUMAN 1 -5.619 -37.7536 QSKSQSLSLESLEPN-p O43194;S427-p QSKSQSLSLESLEPN 0.287132448838618 0.903203179642257 0.17 0.0143333333333334 10.2199225202396 0.61657988031932 0.17 0.0143333333333334 0.0950621752952729 0.867644887248001 2.01994574858973 0.174711667010509 O43194 GPR39 O43194.S427.p_GPR39 O43194_S427sS430s_2_2_427_430 O43194 O43194 G-protein coupled receptor 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22331.22331.3 9.63 9.63 2.228 6 2 2 0 1282.5984 3685.8346 S427s S430s TMT10 423 (K) SQSLsLEsLEPNSGAKPANSAAENGFQEHEV (-) S(0.0)QS(0.0)LS(0.99)LES(0.99)LEPNS(0.0)GAKPANS(0.0)AAENGFQEHEV K:TMT10,s:Phosphorylated S GPR39 52012.5 2 3 4825.1 26.23 HUMAN 1 10.2199 0.6166 QSLARLGSPDYGNSA-p Q14980;S1862-p QSLARLGSPDYGNSA 0.25155486577873 0.0462923412770269 -0.168 -0.318 11.4345999752191 17.8570545061011 -0.168 -0.318 0.0718687352984101 0.0163792702791328 -2.23243060316581 -3.43061299131967 Q14980 NUMA1 Q14980.S1862.p_NUMA1 Q14980_S1862s _1_1_1862_1862 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24491.24491.4 18.9 18.9 2.115 7 1 1 0 661.8385 2564.367 S1862s TMT10 1860 (R) LGsPDYGNSALLSLPGYRPTTR (S) LGS(0.99)PDY(0.0)GNS(0.0)ALLS(0.0)LPGY(0.0)RPT(0.0)T(0.0)R s:Phosphorylated S NUMA1 239339.3 5 27 31.1 900.97 HUMAN 1 -11.4346 -17.8571 QSLDPFDSLESKPFK-p Q6IBW4-4;S325-p QSLDPFDSLESKPFK 0.388754166810574 0.0761905392756831 0.145666666666667 0.274 7.59134893565362 14.8372648925506 0.145666666666667 0.274 0.174126594537303 0.0328301986624671 1.56417914375152 2.84615285968988 Q6IBW4 NCAPH2 Q6IBW4.4.S325.p_NCAPH2 Q6IBW4-4_S325s _1_1_325_325 Q6IBW4-4 Q6IBW4-4|A0A0A6YYG7|Q6IBW4-2 Isoform 4 of Condensin-2 complex subunit H2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32776.32776.4 19.45 15.89 1.252 4 1 1 0 808.4116 3150.6602 S325s TMT10 312 (K) ETPDPWQSLDPFDsLESKPFK (K) ET(0.0)PDPWQS(0.0)LDPFDS(0.99)LES(0.0)KPFK K:TMT10,s:Phosphorylated S NCAPH2 68752.9 1 7 1022.1 187.64 HUMAN 1 7.5913 14.8373 QSLHLQRSTENVNKL-p Q1RLN5;S103-p QSLHLQRSTENVNKL 0.761770448655304 0.369855082784124 -0.0673333333333333 -0.088 2.26238300808183 5.72879285697095 -0.0673333333333333 -0.088 0.593966155268508 0.26737494873041 -0.566155302273047 -1.23581406545967 Q1RLN5 ARHGAP12 Q1RLN5.S103.p_ARHGAP12 Q1RLN5_S103s _1_1_103_103 Q1RLN5 Q8IWW6|Q8IWW6-4|Q8IWW6-2|Q1RLN5|Q8IWW6-3 ARHGAP12 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23403.23416.4 17.42 9.78 1.106 8 1 1 0 925.755 3620.0262 S103s TMT10 103 (R) sTENVNKLPELSSFGKPSSSVQGTGLIR (D) S(0.99)T(0.0)ENVNKLPELS(0.0)S(0.0)FGKPS(0.0)S(0.0)S(0.0)VQGT(0.0)GLIR K:TMT10,s:Phosphorylated S ARHGAP12 91157.4 7 1 974.1 193.01 HUMAN 1 -2.2624 -5.7288 QSLSMPASLGRMNQG-p A8MXP9;S41-p QSLSMPASLGRMNQG 0.730914942318027 0.181705796278294 -0.066 0.166 2.58374624497096 9.74304630936039 -0.066 0.166 0.551601419979112 0.106095110402269 -0.63451972445018 1.93634091712142 A8MXP9 NotFound A8MXP9.S41.p_NotFound A8MXP9_S41s _1_1_41_41 A8MXP9 A8MXP9|P43243|D6REM6|D6RCM3 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36979.36979.3 31.22 27.43 2.239 5 1 1 0 894.1357 2600.4279 S41s TMT10 20 (R) DLSAAGIGLLAAATQSLSMPAsLGR (M) DLS(0.0)AAGIGLLAAAT(0.0)QS(0.0)LS(0.0)MPAS(0.99)LGR s:Phosphorylated S MATR3 100478.9 6 6 92.1 615.57 HUMAN 1 -2.5837 9.743 QSLSRSQSMDIDGVS-p O95155-4;S105-p QSLSRSQSMDIDGVS 0.908001588473182 0.763531723828274 0.0183333333333333 0.0303333333333334 0.824178675698191 1.61969542201291 0.0183333333333333 0.0303333333333334 0.827145921057544 0.688700594375713 0.229174765770997 0.422784853357946 O95155 UBE4B O95155.4.S105.p_UBE4B O95155-4_S105s _1_1_105_105 O95155-4 O95155-4|O95155-2 Isoform 4 of Ubiquitin conjugation factor E4 B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14736.14947.3 18.89 18.89 2.148 3 1 1 0 665.3053 1913.9349 S105s TMT10 103 (R) SQsMDIDGVSCEK (S) S(0.0)QS(0.99)MDIDGVS(0.0)CEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UBE4B 152984.7 7 5 989.1 191.62 HUMAN 1 0.8242 1.6197 QSLYTADSENEEDKR-p Q6ZMT4;S604-p QSLYTADSENEEDKR 0.874302893744735 0.0827423909058082 -0.0323333333333333 0.410333333333333 1.14159145170861 14.3311693189682 -0.0323333333333333 0.410333333333333 0.768848647687121 0.0368878266332537 -0.309027525282064 2.7522285205323 Q6ZMT4 KDM7A Q6ZMT4.S604.p_KDM7A Q6ZMT4_S604s _1_1_604_604 Q6ZMT4 Q6ZMT4|Q6ZMT4-2 Lysine-specific demethylase 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19044.19044.4 23.19 20.78 2.368 4 1 1 0 927.9662 3628.8586 S604s TMT10 586 (R) IIKDERQPFADQSLYTADsENEEDK (R) IIKDERQPFADQS(0.0)LY(0.0)T(0.0)ADS(0.99)ENEEDK K:TMT10,s:Phosphorylated S KDM7A 107867.2 5 2 2120.1 96.87 HUMAN 1 -1.1416 14.3312 QSMERAESPTPGMAQ-p X6R3V9;S128-p QSMERAESPTPGMAQ 0.729757185802638 0.0832993908105411 0.051 0.237 2.59550444444889 14.2888745227493 0.051 0.237 0.55011002007581 0.0372488224336953 0.636985165479977 2.74442461235735 X6R3V9 MON1A X6R3V9.S128.p_MON1A X6R3V9_S128s _1_1_128_128 X6R3V9 X6R3V9|A0A0A0MSQ9|Q86VX9 MON1 homolog A (Yeast), isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16737.16737.3 19.06 17.3 1.228 2 1 1 0 932.0646 2714.212 S128s Hydrogen 126 (R) AEsPTPGMAQGMEPGAGQEGAMFVHAR (S) AES(0.99)PT(0.0)PGMAQGMEPGAGQEGAMFVHAR s:Phosphorylated S MON1A 73464.1 3 2 2671.1 74.31 HUMAN 1 2.5955 14.2889 QSNKVSVTPPEESQN-p Q05209;T509-p QSNKVSVTPPEESQN 0.794154663085116 0.0285647063308557 -0.043 0.348 1.93284618648714 20.9150380467592 -0.043 0.348 0.640789492005804 0.00810020845388701 -0.493878448976183 4.07410077994404 Q05209 PTPN12 Q05209.T509.p_PTPN12 Q05209_T509t _1_1_509_509 Q05209 Q05209|Q05209-3|Q05209-2 Tyrosine-protein phosphatase non-receptor type 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17410.17614.4 17.01 11.06 2.127 5 1 1 0 861.1908 3361.764 T509t TMT10 506 (K) VSVtPPEESQNSDTPPRPDRLPLDEK (G) VS(0.0)VT(0.99)PPEES(0.0)QNS(0.0)DT(0.0)PPRPDRLPLDEK K:TMT10,t:Phosphorylated T PTPN12 88960.6 3 7 644.1 254.82 HUMAN 1 -1.9328 20.915 QSPADACTPPDTSSA-p Q9P265;T140-p QSPADACTPPDTSSA 0.468720713206654 0.195394132083104 0.109333333333333 0.161333333333333 6.07442063819164 9.32337190829223 0.109333333333333 0.161333333333333 0.246920948285463 0.116859173172678 1.29781017114415 1.86365888902134 Q9P265 DIP2B Q9P265.T140.p_DIP2B Q9P265_T140t _1_1_140_140 Q9P265 Q9P265 Disco-interacting protein 2 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13505.13505.3 18.87 14.83 3.465 9 1 1 0 1093.1544 3197.4854 T140t TMT10 129 (R) STFVQSPADACtPPDTSSASEDEGSLRR (Q) S(0.0)T(0.0)FVQS(0.0)PADACT(0.99)PPDT(0.0)S(0.0)S(0.0)AS(0.0)EDEGS(0.0)LRR C:Carbamidomethylation,t:Phosphorylated T DIP2B 173713.6 2 5 1010.1 188.94 HUMAN 1 6.0744 9.3234 QSPAGDGSPEPPTPR-p Q9H6R4;S289-p QSPAGDGSPEPPTPR 0.435048063020442 0.194240770489378 0.133 0.256 6.65590154300405 9.35755306898004 0.133 0.256 0.215978164359613 0.115943042620548 1.40063569123617 1.8695747407937 Q9H6R4 NOL6 Q9H6R4.S289.p_NOL6 Q9H6R4_S289s _1_1_289_289 Q9H6R4 Q9H6R4|Q9H6R4-4|A0A0A0MRW6|Q9H6R4-2|Q9H6R4-3 Nucleolar protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7561.7561.2 11.75 11.75 2.583 3 1 1 0 929.9322 1778.8871 S289s TMT10 281 (R) GQSPAGDGsPEPPTPR (Y) GQS(0.0)PAGDGS(0.99)PEPPT(0.0)PR s:Phosphorylated S NOL6 128446.5 1 1 4638.1 28.52 HUMAN 1 6.6559 9.3576 QSPAMVGSPIRSPKT-p Q5VWG9;S297-p QSPAMVGSPIRSPKT 0.837310998322305 0.913002696143984 0.03 0.011 1.49161677475169 0.553750928684731 0.03 0.011 0.709313658251847 0.880288254370295 0.393022382974827 0.157848595576765 Q5VWG9 TAF3 Q5VWG9.S297.p_TAF3 Q5VWG9_S297s _1_1_297_297 Q5VWG9 Q5VWG9 Transcription initiation factor TFIID subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13328.13328.3 18.16 18.16 4.554 4 1 1 0 722.3851 2085.1891 S297s TMT10 288 (K) TAQSPAMVGsPIRSPK (T) T(0.0)AQS(0.0)PAMVGS(0.99)PIRS(0.0)PK K:TMT10,s:Phosphorylated S TAF3 104321.6 9 6 699.1 240.69 HUMAN 1 1.4916 0.5538 QSPDFKRSPRDLHQP-p Q9NYL2;S733-p QSPDFKRSPRDLHQP 0.0387809009895526 0.00111131906301753 -0.528666666666667 -1.09933333333333 31.9999526318435 49.6382907105957 -0.528666666666667 -1.09933333333333 0.000630964226319702 1.08685330146539e-05 -7.06445838988413 -15.4484262506556 Q9NYL2 ZAK Q9NYL2.S733.p_ZAK Q9NYL2_S727sS733s_2_2_727_733 Q9NYL2 Q9NYL2 Mitogen-activated protein kinase kinase kinase 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10535.10535.4 8.79 8.79 8.79 4 2 2 0 693.0968 2609.4312 S727s S733s TMT10 717 (R) VSQSALNPHQsPDFKRsPR (D) VS(0.0)QS(0.0)ALNPHQS(0.99)PDFKRS(0.99)PR K:TMT10,s:Phosphorylated S MAP3K20 91781 2 12 1239.1 162.96 HUMAN 1 -32 -49.6383 QSPGGFGSPAPSQAE-p P15927;S29-p QSPGGFGSPAPSQAE 0.961207761243369 0.216309379100503 0.00933333333333332 -0.148 0.330653569221931 8.74812143065217 0.00933333333333333 -0.148 0.926690355369824 0.133409838040262 0.096376523303106 -1.7641471377249 P15927 RPA2 P15927.S29.p_RPA2 P15927_S29s _1_1_29_29 P15927 P15927 Replication protein A 32 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26733.26733.4 25.26 25.26 1.35 12 1 1 0 1100.4986 4319.0028 S29s Acetyl 1 (-) MWNSGFESYGSSSYGGAGGYTQSPGGFGsPAPSQAEKK (S) MWNS(0.0)GFES(0.0)Y(0.0)GS(0.0)S(0.0)S(0.0)Y(0.0)GGAGGY(0.0)T(0.0)QS(0.0)PGGFGS(0.99)PAPS(0.0)QAEKK K:TMT10,s:Phosphorylated S RPA2 29360.4 17 2 2718.1 72.93 HUMAN 1 0.3307 -8.7481 QSPGSPGTGQDEEWS-p Q9UKS6;T347-p QSPGSPGTGQDEEWS 0.956607421143909 0.0722857762361749 0.009 -0.207 0.378376692906909 15.162020384109 0.009 -0.207 0.916563019276783 0.0304647740623307 0.109749980009649 -2.90697172216082 Q9UKS6 PACSIN3 Q9UKS6.T347.p_PACSIN3 Q9UKS6_S344sT347t_2_2_344_347 Q9UKS6 Q9UKS6 Protein kinase C and casein kinase substrate in neurons protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22040.22040.5 13.57 13.57 1.101 11 2 2 0 1031.2855 4992.4387 S344s T347t TMT10 319 (R) SPDEVTLTSIVPTRDGTAPPPQSPGsPGtGQDEEWSDEESPRK (A) S(0.0)PDEVT(0.0)LT(0.0)S(0.0)IVPT(0.0)RDGT(0.0)APPPQS(0.0)PGS(0.99)PGT(0.99)GQDEEWS(0.0)DEES(0.0)PRK K:TMT10,s:Phosphorylated S,t:Phosphorylated T PACSIN3 48828.3 8 10 547.1 275.62 HUMAN 1 0.3784 -15.162 QSPISNGSPELGIKK-p Q15723;S191-p QSPISNGSPELGIKK 0.55827821703547 0.264023440197498 0.077 -0.149666666666667 4.67516370350115 7.61867805728717 0.077 -0.149666666666667 0.340787478872724 0.173034297566699 1.04417909801636 -1.56846023544606 Q15723 ELF2 Q15723.S191.p_ELF2 Q15723_S191s _1_1_191_191 Q15723 Q15723|Q15723-1|Q15723-3|Q15723-2 ETS-related transcription factor Elf-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18044.18044.2 17.82 17.82 3.392 4 1 1 0 1097.5786 2114.1858 S191s TMT10 182 (K) TQQSPISNGsPELGIK (K) T(0.0)QQS(0.0)PIS(0.0)NGS(0.99)PELGIK K:TMT10,s:Phosphorylated S ELF2 64422.1 7 3 1339.1 152.08 HUMAN 1 4.6752 -7.6187 QSPKRPRSPGSNSKV-p P78347;S674-p QSPKRPRSPGSNSKV 0.193209904843605 0.465080937660668 0.238 0.0916666666666667 13.9361311273962 4.43320787751155 0.238 0.0916666666666667 0.0404005136981437 0.360312403158308 2.68119953055425 0.998900644720216 P78347 GTF2I P78347.S674.p_GTF2I P78347_S674s _1_1_674_674 P78347 P78347|P78347-3|P78347-4|P78347-2 General transcription factor II-I HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18655.18655.4 27.68 21.46 1.314 6 1 1 0 890.702 3479.8131 S674s TMT10 674 (R) sPGSNSKVPEIEVTVEGPNNNNPQTSAVR (T) S(0.99)PGS(0.0)NS(0.0)KVPEIEVT(0.0)VEGPNNNNPQT(0.0)S(0.0)AVR K:TMT10,s:Phosphorylated S GTF2I 112927.8 38 9 140.1 523.54 HUMAN 1 13.9361 4.4332 QSPQIRASPSPQPSS-p B5MBZ0;S144-p QSPQIRASPSPQPSS 0.755430017768538 0.0392707452267251 0.049 -0.32 2.32895979979011 18.8728384908454 0.049 -0.32 0.584930166887357 0.0129633172890417 0.580480099990154 -3.63795396041888 B5MBZ0 EML4 B5MBZ0.S144.p_EML4 B5MBZ0_S144sS146s_2_2_144_146 B5MBZ0 B5MBZ0|Q9HC35 Echinoderm microtubule-associated protein-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8417.8417.5 19.13 14.91 1.359 7 2 2 0 894.8513 4310.2845 S144s S146s TMT10 127 (R) EKKEESHSNDQSPQIRAsPsPQPSSQPLQIHR (Q) EKKEES(0.0)HS(0.0)NDQS(0.0)PQIRAS(0.99)PS(0.99)PQPS(0.0)S(0.0)QPLQIHR K:TMT10,s:Phosphorylated S EML4 111259.7 3 13 586.1 265.11 HUMAN 1 2.329 -18.8728 QSPRSPISPELHSAP-p Q7Z3B3;S994-p QSPRSPISPELHSAP 0.582575200829836 0.174982512257968 -0.073 -0.157333333333333 4.31754412788841 9.95445461636013 -0.073 -0.157333333333333 0.370037371377294 0.101054239569013 -0.977362325318424 -1.97300495951759 Q7Z3B3 KANSL1 Q7Z3B3.S994.p_KANSL1 Q7Z3B3_S994s _1_1_994_994 Q7Z3B3 Q7Z3B3|A0A0G2JQF4|A0A0G2JNT7|A0A0G2JNB1|A0A0G2JQF5|A0A1W2PRB5|A0A0J9YVS1|Q7Z3B3-2|Q7Z3B3-4 KAT8 regulatory NSL complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19307.19307.3 12.05 12.05 2.349 4 1 1 0 694.3718 2001.133 S994s TMT10 991 (R) SPIsPELHSAPLTPVAR (D) S(0.0)PIS(0.99)PELHS(0.0)APLT(0.0)PVAR s:Phosphorylated S KANSL1 121821.3 2 9 391.1 332.08 HUMAN 1 -4.3175 -9.9545 QSPSTNWSPAVPVKK-p A9Z1X7;S790-p QSPSTNWSPAVPVKK 0.694346795939172 0.0371205867235189 -0.0776666666666667 0.684666666666667 2.97293626381108 19.2305375200095 -0.0776666666666667 0.684666666666667 0.504320211514574 0.0119384033542534 -0.714909968575492 3.71242215147312 A9Z1X7 NotFound A9Z1X7.S790.p_NotFound A9Z1X7_S790s _1_1_790_790 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20312.20312.4 19.81 15.52 1.568 6 1 1 0 838.461 3270.8454 S790s TMT10 772 (K) KPPAPPSPVQSQSPSTNWsPAVPVK (K) KPPAPPS(0.0)PVQS(0.0)QS(0.0)PS(0.0)T(0.0)NWS(0.99)PAVPVK K:TMT10,s:Phosphorylated S SRRM1 103445.7 1 48 8.1 1346.57 HUMAN 1 -2.9729 19.2305 QSPVEEQSPASLSSL-p Q8WWI1-3;S539-p QSPVEEQSPASLSSL 0.732783197794934 0.138626545068149 0.0786666666666667 -0.197666666666667 2.55547414364828 11.3045958936012 0.0786666666666667 -0.197666666666667 0.55520399907554 0.0740526169418104 0.628581741382321 -2.20853279631926 Q8WWI1 LMO7 Q8WWI1.3.S539.p_LMO7 Q8WWI1-3_S539s _1_1_539_539 Q8WWI1-3 Q8WWI1|Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25431.25431.3 17.06 15.78 1.495 8 1 1 0 998.1765 2912.5414 S539s TMT10 523 (R) VTTEIQLPSQSPVEEQsPASLSSLR (S) VT(0.0)T(0.0)EIQLPS(0.0)QS(0.0)PVEEQS(0.99)PAS(0.0)LS(0.0)S(0.0)LR s:Phosphorylated S LMO7 154694.3 1 12 61.1 704.74 HUMAN 1 2.5555 -11.3046 QSQDLNRSLLKEEDP-p Q9H019;S261-p QSQDLNRSLLKEEDP 0.555599544665084 0.0330239547447504 0.0963333333333333 -0.501666666666667 4.71169787216608 19.9724023761054 0.0963333333333334 -0.501666666666667 0.337932695754391 0.0100637482096608 1.05095013823719 -3.86941572840364 Q9H019 MTFR1L Q9H019.S261.p_MTFR1L Q9H019_S261s _1_1_261_261 Q9H019 Q9H019|Q9H019-3|E9PLD2 Mitochondrial fission regulator 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34896.34896.3 19.49 19.49 13.14 2 1 1 0 740.7413 2140.2427 S261s Hydrogen 261 (R) sLLKEEDPAVLISEVLR (R) S(0.99)LLKEEDPAVLIS(0.0)EVLR K:TMT10-Lys-Only,s:Phosphorylated S MTFR1L 32413.3 3 6 1618.1 127.17 HUMAN 1 4.7117 -19.9724 QSQKGKSSPICSTTG-p Q12802-2;S650-p QSQKGKSSPICSTTG 0.202846697385928 0.00442634374054194 0.53 -0.736 13.4304536302582 34.5776942805333 0.53 -0.736 0.0453894203913634 0.000348522300433033 2.58892940623579 -7.94003509940652 Q12802 AKAP13 Q12802.2.S650.p_AKAP13 Q12802-2_S650s _1_1_650_650 Q12802-2 Q12802-2|Q12802-4 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9288.9288.2 8.49 5.34 1.519 5 1 1 0 903.424 1725.8729 S650s TMT10 649 (K) SsPICSTTGDDK (L) S(0.0)S(0.99)PICS(0.0)T(0.0)T(0.0)GDDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AKAP13 310921 7 3 66.1 683.25 HUMAN 1 13.4305 -34.5777 QSQNEELSPLVPVET-p Q8IW35-2;S314-p QSQNEELSPLVPVET 0.424226533641084 0.642528627355807 0.152333333333333 -0.0513333333333333 6.86419049858768 2.61789025769527 0.152333333333333 -0.0513333333333333 0.205864257461814 0.547281760210217 1.43721890643779 -0.641588647754734 Q8IW35 CEP97 Q8IW35.2.S314.p_CEP97 Q8IW35-2_S314s _1_1_314_314 Q8IW35-2 Q8IW35-2 Isoform 2 of Centrosomal protein of 97 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23119.23119.3 16.71 16.71 5.993 3 1 1 0 874.4354 2541.318 S314s TMT10 303 (R) QLMNQSQNEELsPLVPVETR (A) QLMNQS(0.0)QNEELS(0.99)PLVPVET(0.0)R s:Phosphorylated S CEP97 100762.5 1 3 759.1 230.22 HUMAN 1 6.8642 -2.6179 QSQRERLSWPKFQSI-p Q8IVF2;S260-p QSQRERLSWPKFQSI 0.0593308507492355 0.0197549993638541 -0.444 -0.575333333333333 26.8095054248034 23.3865803289172 -0.444 -0.575333333333333 0.00208472827874361 0.00458502773532874 -5.5171564292272 -4.64110259163992 Q8IVF2 AHNAK2 Q8IVF2.S260.p_AHNAK2 Q8IVF2_S260s _1_1_260_260 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15111.15531.3 8.42 8.42 99 1 1 1 0 485.2713 1373.8305 S260s TMT10 257 (R) ERLsWPK (F) ERLS(1.0)WPK K:TMT10,s:Phosphorylated S AHNAK2 617759.6 1 2 237.1 418.35 HUMAN 1 -26.8095 -23.3866 QSQRHGHYFVALFDY-p P42685;Y46-p QSQRHGHYFVALFDY 0.136348230417904 0.459967434283603 0.269666666666667 0.137666666666667 17.7531550863552 4.49745778785077 0.269666666666667 0.137666666666667 0.0167758483429148 0.355021145721669 3.41247985325467 1.01091529040983 P42685 FRK P42685.Y46.p_FRK P42685_Y46y _1_1_46_46 P42685 P42685 Tyrosine-protein kinase FRK GG20160819_MSz_CCLE_T4D7_pY_Injection_02.22838.22961.3 26.48 26.48 25.315 2 1 1 0 678.3264 1952.9969 Y46y TMT10 43 (R) HGHyFVALFDYQAR (T) HGHY(0.99)FVALFDY(0.0)QAR y:Phosphorylated Y FRK 58709.5 7 1 57.1 40.52 HUMAN 1 17.7532 4.4975 QSQSLTPSPGWQSLG-p Q8NDV7;S1869-p QSQSLTPSPGWQSLG 0.340665615596187 0.0486068316896679 0.215333333333333 0.232333333333333 8.69642227457837 17.5621969908032 0.215333333333333 0.232333333333333 0.135007461839967 0.0175299348047219 1.75581303839937 3.37152203439049 Q8NDV7 TNRC6A Q8NDV7.S1869.p_TNRC6A Q8NDV7_S1869s _1_1_1869_1869 Q8NDV7 Q8NDV7|Q8NDV7-5|Q8NDV7-6|Q8NDV7-2 Trinucleotide repeat-containing gene 6A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26806.26806.3 12.28 12.28 1.559 8 1 1 0 931.4471 2712.3579 S1869s TMT10 1859 (R) FFAQSQSLTPsPGWQSLGSSQSR (L) FFAQS(0.0)QS(0.0)LT(0.0)PS(0.99)PGWQS(0.0)LGS(0.0)S(0.0)QS(0.0)R s:Phosphorylated S TNRC6A 211092.3 1 20 181.1 478.43 HUMAN 1 8.6964 17.5622 QSRELSVSGKGKTPL-p Q6PIJ6;S641-p QSRELSVSGKGKTPL 0.104358714103694 0.950598712979695 -0.711333333333333 -0.00866666666666663 20.688986414791 0.314673739624188 -0.711333333333333 -0.0086666666666666 0.00853299239404791 0.930106385653402 -4.02839937919248 -0.0918618324037822 Q6PIJ6 FBXO38 Q6PIJ6.S641.p_FBXO38 Q6PIJ6_S641s _1_1_641_641 Q6PIJ6 Q6PIJ6|Q6PIJ6-2 F-box only protein 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12530.12530.2 8.42 8.42 2.311 2 1 1 0 629.3465 1177.7193 S641s TMT10 637 (R) ELSVsGK (G) ELS(0.0)VS(0.99)GK K:TMT10,s:Phosphorylated S FBXO38 135824.2 1 1 2435.1 83.55 HUMAN 1 -20.689 -0.3147 QSRFLLNSVLYQEYS-p Q8IW93;S292-p QSRFLLNSVLYQEYS 0.23177071508838 0.133030011824558 0.233 0.245666666666667 12.211039099508 11.5462688448731 0.233 0.245666666666667 0.0601029916956885 0.0700443509760835 2.3698239097933 2.25103046680943 Q8IW93 ARHGEF19 Q8IW93.S292.p_ARHGEF19 Q8IW93_S292s _1_1_292_292 Q8IW93 Q8IW93|Q8IW93-2 Rho guanine nucleotide exchange factor 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.35875.35875.3 17.14 17.14 3.245 5 1 1 0 795.3961 2304.2073 S292s TMT10 288 (R) FLLNsVLYQEYSDVASAR (E) FLLNS(0.99)VLY(0.0)QEY(0.0)S(0.0)DVAS(0.0)AR s:Phosphorylated S ARHGEF19 90051.5 1 3 2080.1 98.61 HUMAN 1 12.211 11.5463 QSRIRIDSLSAQLSQ-p P02545;S301-p QSRIRIDSLSAQLSQ 0.532600177749201 0.2928581397799 -0.1 -0.106666666666667 5.06255985164659 7.04134662298409 -0.1 -0.106666666666667 0.311705176609989 0.197635673339334 -1.11551027526377 -1.46784086219703 P02545 LMNA P02545.S301.p_LMNA P02545_S301s _1_1_301_301 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21643.21643.2 14.34 14.34 2.909 3 1 1 0 870.4606 1659.9479 S301s Hydrogen 299 (R) IDsLSAQLSQLQK (Q) IDS(0.99)LS(0.0)AQLS(0.0)QLQK K:TMT10-Lys-Only,s:Phosphorylated S LMNA 74423.5 8 14 60.1 706.83 HUMAN 1 -5.0626 -7.0413 QSRRSPVSPQLQQQH-p Q7Z5Q1-9;S529-p QSRRSPVSPQLQQQH 0.849516481351664 0.701694375443354 0.0343333333333333 0.044 1.37088355831682 2.11397500977733 0.0343333333333333 0.044 0.729309119538439 0.614614071328656 0.364486838646179 0.533833948787491 Q7Z5Q1 CPEB2 Q7Z5Q1.9.S529.p_CPEB2 Q7Z5Q1-9_S526sS529s_2_2_526_529 Q7Z5Q1-9 Q7Z5Q1-9|Q7Z5Q1-8|J3KN18|Q7Z5Q1-3|Q7Z5Q1-6|Q7Z5Q1-4|Q7Z5Q1-5 Isoform 8 of Cytoplasmic polyadenylation element-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15619.15619.4 13.6 13.6 99 2 2 2 0 738.1154 2789.5121 S526s S529s TMT10 525 (R) RsPVsPQLQQQHQAAAAAFLQQR (N) RS(1.0)PVS(1.0)PQLQQQHQAAAAAFLQQR s:Phosphorylated S CPEB2 110886.2 1 1 6149.1 13.6 HUMAN 1 1.3709 2.114 QSRTPRISPPIKEEE-p Q6PJT7;S409-p QSRTPRISPPIKEEE 0.886027178849554 0.0302764161988639 0.021 0.462666666666667 1.02908804256492 20.5456325750331 0.021 0.462666666666667 0.789025784560557 0.00881935333798224 0.281159025091601 3.99317246221348 Q6PJT7 ZC3H14 Q6PJT7.S409.p_ZC3H14 Q6PJT7_S409s _1_1_409_409 Q6PJT7 Q6PJT7|Q6PJT7-2|Q6PJT7-9|Q6PJT7-5|G3V256|Q6PJT7-11|Q6PJT7-3|Q6PJT7-4|Q6PJT7-10|G3V5I6 Zinc finger CCCH domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15511.15511.5 14 14 6.874 3 1 1 0 577.3231 2802.627 S409s TMT10 408 (R) IsPPIKEEETKGDSVEK (N) IS(0.99)PPIKEEET(0.0)KGDS(0.0)VEK K:TMT10,s:Phosphorylated S ZC3H14 83844.1 15 10 420.1 320.31 HUMAN 1 1.0291 20.5456 QSRVNKKSPGPVRKP-p Q9C0D5;S85-p QSRVNKKSPGPVRKP 0.928753118966946 0.723500322553255 -0.0163333333333333 0.0346666666666667 0.637092710956897 1.93406986693478 -0.0163333333333334 0.0346666666666667 0.863556443213899 0.640608966775274 -0.18019389841247 0.494094647143879 Q9C0D5 TANC1 Q9C0D5.S85.p_TANC1 Q9C0D5_S85s _1_1_85_85 Q9C0D5 Q9C0D5|Q9C0D5-2 Protein TANC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.4132.4132.4 8.68 8.68 99 1 1 1 0 405.7406 1539.9735 S85s Hydrogen 81 (R) VNKKsPGPVR (K) VNKKS(1.0)PGPVR K:TMT10-Lys-Only,s:Phosphorylated S TANC1 204383.7 5 3 678.1 246.63 HUMAN 1 -0.6371 1.9341 QSSDEMRSPEGYLRG-p Q9H5H4;S23-p QSSDEMRSPEGYLRG 0.365498843349433 0.0535552282032114 0.155 0.226666666666667 8.11405204666913 16.9468401328586 0.155 0.226666666666667 0.154381336136371 0.0201983543376406 1.6549399853882 3.24970526230582 Q9H5H4 ZNF768 Q9H5H4.S23.p_ZNF768 Q9H5H4_S23s_1_1_23_23 Q9H5H4 Q9H5H4 Zinc finger protein 768 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24936.24936.3 11.1 11.1 2 4 1 1 0 1105.5107 3218.5626 M21m S23s TMT10 4 (R) EALPWGLEPQDVQSSDEmRsPEGYLR (G) EALPWGLEPQDVQS(0.0)S(0.0)DEM(1.0)RS(0.99)PEGY(0.0)LR m:Oxidized methionine,s:Phosphorylated S ZNF768 61482.8 5 133 240.2 415.72 HUMAN 1 8.1141 16.9468 QSSDLTPSGDVSPVK-p Q8WYQ5;S373-p QSSDLTPSGDVSPVK 0.0691244016116837 0.0196240111735585 0.402 0.355333333333333 25.0094049806992 23.4381146253659 0.402 0.355333333333333 0.00315543691467265 0.00453094236093481 5.04615916392626 4.65342714185995 Q8WYQ5 DGCR8 Q8WYQ5.S373.p_DGCR8 Q8WYQ5_S373sS377s_2_2_373_377 Q8WYQ5 Q8WYQ5|Q8WYQ5-3 Microprocessor complex subunit DGCR8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14297.14297.5 14.82 10.25 4.015 6 2 2 0 770.5818 3688.9419 S373s S377s TMT10 358 (K) MKDNEEREQSSDLTPsGDVsPVKPLSR (S) MKDNEEREQS(0.0)S(0.0)DLT(0.0)PS(0.99)GDVS(0.99)PVKPLS(0.0)R K:TMT10,s:Phosphorylated S DGCR8 86842.3 9 10 1117.1 175.44 HUMAN 1 25.0094 23.4381 QSSDSLNSPTLLAL_-p P15408;S320-p QSSDSLNSPTLLAL_ 0.807677513163485 0.424536659897373 0.035 0.0913333333333334 1.78264889328014 4.95270596202463 0.035 0.0913333333333334 0.663338356882346 0.319690259241794 0.460111319864215 1.09516447108383 P15408 FOSL2 P15408.S320.p_FOSL2 P15408_S320s _1_1_320_320 P15408 P15408|P15408-2|P15408-3 Fos-related antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28884.28884.3 13.57 13.57 1.448 9 1 1 0 759.0227 2195.0877 S320s TMT10 307 (R) SSSSGDQSSDSLNsPTLLAL (-) S(0.0)S(0.0)S(0.0)S(0.0)GDQS(0.0)S(0.0)DS(0.0)LNS(0.99)PT(0.0)LLAL s:Phosphorylated S FOSL2 35363.9 2 5 2212.1 93.37 HUMAN 1 1.7826 4.9527 QSSEMTETDEESGIL-p Q3T8J9-3;T418-p QSSEMTETDEESGIL 0.926741605392514 0.155444377308683 0.0196666666666667 -0.181666666666667 0.65234363352826 10.6320091139561 0.0196666666666667 -0.181666666666667 0.860529249514562 0.086456786367933 0.184244985646453 -2.09085202644792 Q3T8J9 GON4L Q3T8J9.3.T418.p_GON4L Q3T8J9-3_T418t _1_1_418_418 Q3T8J9-3 Q3T8J9|Q3T8J9-3|A0A087WUE6|Q3T8J9-2|A4PB68 Isoform 3 of GON-4-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19973.19973.3 12.31 12.31 1.135 6 1 1 0 913.4192 2658.2704 T418t TMT10 411 (R) QSSEMTEtDEESGILSEAEK (V) QS(0.0)S(0.0)EMT(0.0)ET(0.99)DEES(0.0)GILS(0.0)EAEK K:TMT10,t:Phosphorylated T GON4L 250541.8 2 6 291.1 381.52 HUMAN 1 0.6523 -10.632 QSSGRRVSLHCLLDQ-p Q8IWF6;S127-p QSSGRRVSLHCLLDQ 0.321266030442159 0.00676739777746227 -0.383 0.620333333333333 9.23428158858351 31.1446962702112 -0.383 0.620333333333333 0.119281156483353 0.000768299185855303 -1.84892598362603 6.776818069942 Q8IWF6 DENND6A Q8IWF6.S127.p_DENND6A Q8IWF6_S127s _1_1_127_127 Q8IWF6 Q8IWF6 Protein DENND6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24547.24547.4 15.42 15.42 99 1 1 1 0 543.0376 2089.1629 S127s TMT10 125 (R) RVsLHCLLDQFDK (D) RVS(1.0)LHCLLDQFDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DENND6A 70258.1 4 1 5913.1 15.42 HUMAN 1 -9.2343 31.1447 QSSLSSASPSKATKS-p Q5W0B1;S719-p QSSLSSASPSKATKS 0.0935074713606699 0.00488459422585612 -0.375 -1.295 21.874872657287 33.7467985649791 -0.375 -1.295 0.00649400672856849 0.000422007474837792 -4.29337437939517 -7.64406454590693 Q5W0B1 RNF219 Q5W0B1.S719.p_RNF219 Q5W0B1_S719s _1_1_719_719 Q5W0B1 Q5W0B1 RING finger protein 219 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12920.12920.3 16.87 16.87 1.107 6 1 1 0 577.3085 1649.9474 S719s TMT10 711 (K) IQSSLSSAsPSK (A) IQS(0.0)S(0.0)LS(0.0)S(0.0)AS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S RNF219 82427.3 7 9 1133.1 173.85 HUMAN 1 -21.8749 -33.7468 QSSLSVNSDISKKSK-p Q9P1T7-1;S252-p QSSLSVNSDISKKSK 0.376281505722421 0.710179879789927 -0.121333333333333 0.0496666666666667 7.85081552348231 2.04426731321406 -0.121333333333333 0.0496666666666667 0.164028173017147 0.624558709048264 -1.60927000827721 0.518522492307487 Q9P1T7 MDFIC Q9P1T7.1.S252.p_MDFIC Q9P1T7-1_S252s _1_1_252_252 Q9P1T7-1 Q9P1T7-1|J3KN13 Isoform 1 of MyoD family inhibitor domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15463.15463.4 17.57 17.57 3.317 5 1 1 0 658.3876 2550.5637 S252s TMT10 243 (R) KIQSSLSVNsDISKK (S) KIQS(0.0)S(0.0)LS(0.0)VNS(0.99)DIS(0.0)KK K:TMT10,s:Phosphorylated S MDFIC 38638.9 5 2 2928.1 65.75 HUMAN 1 -7.8508 2.0443 QSSPCNKSPKSHGLQ-p Q12986;S95-p QSSPCNKSPKSHGLQ 0.827900316337911 0.00351326223614904 -0.0396666666666667 -0.635333333333333 1.57697058753286 36.6854715336355 -0.0396666666666667 -0.635333333333333 0.695509299540033 0.000214512619688396 -0.412938392234994 -8.73590012224017 Q12986 NFX1 Q12986.S95.p_NFX1 Q12986_S95s _1_1_95_95 Q12986 Q12986|Q12986-2|Q12986-3 Transcriptional repressor NF-X1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8758.8758.4 14.32 14.32 2.522 6 1 1 0 645.3288 2498.3276 S95s TMT10 82 (K) SQQTSFQSSPCNKsPK (S) S(0.0)QQT(0.0)S(0.0)FQS(0.0)S(0.0)PCNKS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NFX1 130097.9 2 2 3026.1 62.9 HUMAN 1 -1.577 -36.6855 QSSSEQCSDGEGRKR-p O60343-2;S678-p QSSSEQCSDGEGRKR 0.246490628895716 0.394310368846395 0.231 0.132333333333333 11.6382313018954 5.37218770346842 0.231 0.132333333333333 0.0685767453727014 0.290256015820677 2.26832634797508 1.17159522749916 O60343 TBC1D4 O60343.2.S678.p_TBC1D4 O60343-2_S678s _1_1_678_678 O60343-2 O60343-2 Isoform 2 of TBC1 domain family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2726.2726.2 10.07 10.07 2.277 4 1 1 0 868.3434 1655.7129 S678s TMT10 671 (R) QSSSEQCsDGEGR (K) QS(0.0)S(0.0)S(0.0)EQCS(0.99)DGEGR C:Carbamidomethylation,s:Phosphorylated S TBC1D4 141150.8 2 13 603.1 262.97 HUMAN 1 11.6382 5.3722 QSSSKRKSKDEEEDE-p Q92794;S1104-p QSSSKRKSKDEEEDE 0.205585970825009 0.8961452434813 0.232 0.0156666666666667 13.2838233752182 0.668561049498979 0.232 0.0156666666666667 0.0469480612469893 0.857321855139545 2.56233838484743 0.188523266698861 Q92794 KAT6A Q92794.S1104.p_KAT6A Q92794_S1104sS1113s_2_2_1104_1113 Q92794 Q92794 Histone acetyltransferase KAT6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22349.22349.5 7.29 7.29 7.289 4 2 2 0 862.0356 4146.2224 S1104s S1113s TMT10 1102 (K) RKsKDEEEDEEsDDADDTPILKPVSLLR (K) RKS(0.99)KDEEEDEES(0.99)DDADDT(0.0)PILKPVS(0.0)LLR K:TMT10,s:Phosphorylated S KAT6A 227705.4 1 20 903.1 203.52 HUMAN 1 13.2838 0.6686 QSSSSRESPVPKVRA-p Q9UJF2-2;S1069-p QSSSSRESPVPKVRA 0.126572282263763 0.630984865857374 0.298333333333333 0.048 18.6265691032425 2.71874993318249 0.298333333333333 0.048 0.0137196518128997 0.534718249758779 3.59019955418189 0.66259635758441 Q9UJF2 RASAL2 Q9UJF2.2.S1069.p_RASAL2 Q9UJF2-2_S1069s _1_1_1069_1069 Q9UJF2-2 Q9UJF2-2 Isoform 2 of Ras GTPase-activating protein nGAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4796.4796.3 12.92 6.21 2.973 5 1 1 0 652.3388 1875.0336 S1069s TMT10 1061 (R) QQSSSSREsPVPK (V) QQS(0.0)S(0.0)S(0.0)S(0.0)RES(0.99)PVPK K:TMT10,s:Phosphorylated S RASAL2 145265.6 4 43 281.2 388.28 HUMAN 1 18.6266 2.7187 QSSTRSPSPYSRRQR-p Q9NYV4-2;S293-p QSSTRSPSPYSRRQR 0.207422631751664 0.466967920137926 -0.193333333333333 -0.109333333333333 13.1846860641983 4.4093285150568 -0.193333333333333 -0.109333333333333 0.0480320799641315 0.362299010992191 -2.54440023880101 -0.994426782685155 Q9NYV4 CDK12 Q9NYV4.2.S293.p_CDK12 Q9NYV4-2_S291sS293s_2_2_291_293 Q9NYV4-2 Q9NYV4|Q9NYV4-2 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12273.12273.4 10.82 10.82 1.336 12 2 2 0 851.9033 3244.6639 S291s S293s TMT10 273 (R) QSVSPPYKEPSAYQSSTRsPsPYSR (R) QS(0.0)VS(0.0)PPY(0.0)KEPS(0.0)AY(0.0)QS(0.0)S(0.0)T(0.0)RS(0.99)PS(0.99)PY(0.0)S(0.0)R K:TMT10,s:Phosphorylated S CDK12 163853.1 2 37 59.1 708.76 HUMAN 1 -13.1847 -4.4093 QSSTRTRSPSPDDIL-p Q13523;S578-p QSSTRTRSPSPDDIL 0.0654149293186431 0.0263581786161247 -0.572666666666667 -0.62 25.5779297497578 21.4505434515318 -0.572666666666667 -0.62 0.00276826094081535 0.00716053801686874 -5.19165360643933 -4.19310885826289 Q13523 PRPF4B Q13523.S578.p_PRPF4B Q13523_S578sS580s_2_2_578_580 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.11088.11671.2 10.22 10.22 1.422 3 2 2 0 773.3197 1385.7019 S578s S580s Hydrogen 576 (R) TRsPsPDDILER (V) T(0.0)RS(0.99)PS(0.99)PDDILER s:Phosphorylated S PRPF4B 117327.1 4 42 70.1 666.55 HUMAN 1 -25.5779 -21.4505 QSTKGYYSPYSVSGS-p Q15149;S4613-p QSTKGYYSPYSVSGS 0.0184334391415127 0.00394546944963473 0.834666666666667 0.788333333333333 40.7775704793531 35.4503484175275 0.834666666666667 0.788333333333334 8.36070600210088e-05 0.000285078955060055 10.5116093530936 8.26148876799543 Q15149 PLEC Q15149.S4613.p_PLEC Q15149_S4613s _1_1_4613_4613 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12066.12066.2 17.76 14.82 2.131 10 1 1 0 1046.4652 2011.9559 S4613s TMT10 4610 (K) GYYsPYSVSGSGSTAGSR (T) GY(0.0)Y(0.0)S(0.99)PY(0.0)S(0.0)VS(0.0)GS(0.0)GS(0.0)T(0.0)AGS(0.0)R s:Phosphorylated S PLEC 533778 4 40 44.1 794.85 HUMAN 1 40.7776 35.4503 QSTLFKDSPLRTLKR-p Q9UH99;S38-p QSTLFKDSPLRTLKR 0.2592179584854 0.414001629439095 0.201666666666667 0.107666666666667 11.1380488085665 5.09499864333015 0.201666666666667 0.107666666666667 0.0769476071640467 0.309385628192511 2.18031214706628 1.12120866413752 Q9UH99 SUN2 Q9UH99.S38.p_SUN2 Q9UH99_S38s _1_1_38_38 Q9UH99 Q9UH99-2|Q9UH99-3 SUN domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17357.17357.4 28.88 28.88 1.14 12 1 1 0 905.1727 3537.6982 S38s TMT10 11 (R) YSQGDDDGSSSSGGSSVAGSQSTLFKDsPLR (T) Y(0.0)S(0.0)QGDDDGS(0.0)S(0.0)S(0.0)S(0.0)GGS(0.0)S(0.0)VAGS(0.0)QS(0.0)T(0.0)LFKDS(0.99)PLR K:TMT10,s:Phosphorylated S SUN2 80537.7 10 3 1093.1 178.7 HUMAN 1 11.138 5.095 QSVRRINSLLEYSRQ-p Q6P4F7;S847-p QSVRRINSLLEYSRQ 0.549780068218602 0.00484218638476469 0.107666666666667 -0.546 4.79292829070445 33.8140553423796 0.107666666666667 -0.546 0.331670748544994 0.000415522423962079 1.06597082951871 -7.66766454251115 Q6P4F7 ARHGAP11A Q6P4F7.S847.p_ARHGAP11A Q6P4F7_S847s _1_1_847_847 Q6P4F7 Q6P4F7|Q6P4F7-3 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23694.23694.2 12.55 4.36 4.663 3 1 1 0 702.3593 1323.747 S847s TMT10 845 (R) INsLLEYSR (Q) INS(0.99)LLEY(0.0)S(0.0)R s:Phosphorylated S ARHGAP11A 114948.2 2 16 414.1 321.53 HUMAN 1 4.7929 -33.8141 QSWEETWSLIPEKGL-p Q7Z736;S82-p QSWEETWSLIPEKGL 0.943309913754527 0.348044238251497 0.0166666666666667 -0.0916666666666667 0.499199920261938 6.07606172401736 0.0166666666666666 -0.0916666666666667 0.891415144112354 0.246827660911556 0.143065295967348 -1.29778962485109 Q7Z736 PLEKHH3 Q7Z736.S82.p_PLEKHH3 Q7Z736_S82s _1_1_82_82 Q7Z736 Q7Z736|X6R3U4|Q7Z736-2|Q7Z736-3|Q7Z736-4 Pleckstrin homology domain-containing family H member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.32772.32772.3 15.4 12.07 2.2 3 1 1 0 762.061 2204.2003 S82s TMT10 74 (R) LQSWEETWsLIPEK (G) LQS(0.0)WEET(0.0)WS(0.99)LIPEK K:TMT10,s:Phosphorylated S PLEKHH3 86342.8 1 1 5915.1 15.4 HUMAN 1 0.4992 -6.0761 QSWYSMLSPTYKQRN-p Q96CP6;S83-p QSWYSMLSPTYKQRN 0.336559539837921 0.008031872463891 -0.206 -0.459333333333333 8.81573653651581 29.8581988855096 -0.206 -0.459333333333333 0.131348871652675 0.00103318980339952 -1.77646655697152 -6.37904769085865 Q96CP6 GRAMD1A Q96CP6.S83.p_GRAMD1A Q96CP6_S83s _1_1_83_83 Q96CP6 Q96CP6|Q96CP6-3|M0R0J9|S4R3I2 GRAM domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29953.29953.3 17.41 17.41 2.785 6 1 1 0 720.6835 2080.0648 S83s TMT10 75 (K) MQSWYSMLsPTYK (Q) MQS(0.0)WY(0.0)S(0.0)MLS(0.99)PT(0.0)Y(0.0)K K:TMT10,s:Phosphorylated S GRAMD1A 81363.3 1 3 1250.1 161.94 HUMAN 1 -8.8157 -29.8582 QSYPGRGSGSDDTEL-p Q13948;S562-p QSYPGRGSGSDDTEL 0.205247820557502 0.0874045865466698 -0.201 -0.245333333333333 13.2995251619168 14.0125731942206 -0.201 -0.245333333333333 0.0467786284142853 0.0396956283234345 -2.56518245343714 -2.69360964528808 Q13948 CUX1 Q13948.S562.p_CUX1 Q13948_S562s _1_1_562_562 Q13948 Q13948|Q13948-2|Q13948-10|Q13948-9|P39880-9 Protein CASP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16950.16950.3 10.21 10.21 1.143 5 1 1 0 765.3603 2214.0988 S562s TMT10 553 (K) FLQSYPGRGsGSDDTELR (Y) FLQS(0.0)Y(0.0)PGRGS(0.99)GS(0.0)DDT(0.0)ELR s:Phosphorylated S CUX1 77682.1 1 12 1194.2 167.77 HUMAN 1 -13.2995 -14.0126 QTAGRRPSEGNEPST-p Q96Q45-3;S86-p QTAGRRPSEGNEPST 0.100173143638416 0.897329543665764 -0.314333333333333 -0.0143333333333333 21.1380691559595 0.659048620208811 -0.314333333333333 -0.0143333333333333 0.0076947246653011 0.859201720448703 -4.1275615609293 -0.186005055813976 Q96Q45 TMEM237 Q96Q45.3.S86.p_TMEM237 Q96Q45-3_S86s _1_1_86_86 Q96Q45-3 Q96Q45-3|Q96Q45-5|Q96Q45-2|A0A087WWU1|F2Z329 Isoform 3 of Transmembrane protein 237 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15539.15539.4 13.4 13.4 1.243 7 1 1 0 841.9289 3284.7235 S86s TMT10 67 (K) NTPASASLEGLAQTAGRRPsEGNEPSTK (E) NT(0.0)PAS(0.0)AS(0.0)LEGLAQT(0.0)AGRRPS(0.99)EGNEPS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S TMEM237 48471.6 6 2 2351.1 87.06 HUMAN 1 -21.1381 -0.659 QTALLSGSDEE____-p Q96B21;S272-p QTALLSGSDEE____ 0.830607885532595 0.0231316373105155 -0.102666666666667 0.356333333333333 1.55226273901236 22.3326909032138 -0.102666666666667 0.356333333333333 0.699477462858216 0.00584427858471595 -0.407194474465327 4.39368764481114 Q96B21 TMEM45B Q96B21.S272.p_TMEM45B Q96B21_S270sS272s_2_2_270_272 Q96B21 Q96B21 Transmembrane protein 45B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24408.24408.2 9.67 9.67 5.954 6 2 2 0 1173.978 2187.0138 S270s S272s TMT10 258 (K) LNSDDTYQTALLsGsDEE (-) LNS(0.0)DDT(0.0)Y(0.0)QT(0.0)ALLS(0.99)GS(0.99)DEE s:Phosphorylated S TMEM45B 32110.8 2 2 6131.1 13.74 HUMAN 1 -1.5523 22.3327 QTASAPATPLVNKHR-p Q53SF7;T298-p QTASAPATPLVNKHR 0.530447327914914 0.210672567988127 0.0923333333333333 -0.146 5.09678516223309 8.89720451251403 0.0923333333333334 -0.146 0.309258385128823 0.128907904526161 1.12176527369136 -1.78993266752503 Q53SF7 COBLL1 Q53SF7.T298.p_COBLL1 Q53SF7_T298t _1_1_298_298 Q53SF7 A0A0D9SG04|Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4|A0A0B4J1Z0 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13200.13200.3 15.37 15.37 5.904 3 1 1 0 651.0172 1871.0638 T298t TMT10 290 (R) DQTASAPAtPLVNK (H) DQT(0.0)AS(0.0)APAT(0.99)PLVNK K:TMT10,t:Phosphorylated T COBLL1 132526.1 6 6 163.1 494.83 HUMAN 1 5.0968 -8.8972 QTASEEETPPPLLTK-p Q9UKV3;T414-p QTASEEETPPPLLTK 0.955888401918538 0.00967750202689351 0.00833333333333332 0.411333333333333 0.383151373833781 28.3700428819619 0.00833333333333332 0.411333333333333 0.915555893615217 0.00145544470954221 0.111081143354267 5.94237977452122 Q9UKV3 ACIN1 Q9UKV3.T414.p_ACIN1 Q9UKV3_S410sT414t_2_2_410_414 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.32001.32191.3 20.61 20.36 1.591 5 2 2 0 1013.8476 2879.6018 S410s T414t TMT10 399 (K) ASLVALPEQTAsEEEtPPPLLTK (E) AS(0.0)LVALPEQT(0.0)AS(0.99)EEET(0.99)PPPLLT(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T ACIN1 152258.2 11 45 32.2 899.18 HUMAN 1 0.3832 28.37 QTATGDPSDEDEDSD-p Q2YD98;S281-p QTATGDPSDEDEDSD 0.321412916785627 0.00297589273654222 -0.189666666666667 0.651333333333333 9.22424531870523 38.050434041018 -0.189666666666667 0.651333333333333 0.119557126418221 0.000156659449426457 -1.84718797308113 9.28812378244375 Q2YD98 UVSSA Q2YD98.S281.p_UVSSA Q2YD98_S281sS287s_2_2_281_287 Q2YD98 Q2YD98 UV-stimulated scaffold protein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22255.22458.3 17.13 17.13 1.183 5 2 2 0 1123.7922 3209.4192 S281s S287s TMT10 266 (R) AGGGAQPSQTATGDPsDEDEDsDLEEFVR (S) AGGGAQPS(0.0)QT(0.0)AT(0.0)GDPS(0.99)DEDEDS(0.99)DLEEFVR s:Phosphorylated S UVSSA 81388.8 1 5 2615.1 76.7 HUMAN 1 -9.2242 38.0504 QTAVRPGSPSTSTMR-p Q9Y4A5;S1628-p QTAVRPGSPSTSTMR 0.808606854479916 0.00248584650157384 -0.0363333333333333 0.849333333333333 1.77309515744117 39.8491691486647 -0.0363333333333333 0.849333333333333 0.664799194025224 0.000103534021928207 -0.45794462638629 10.0637248176388 Q9Y4A5 TRRAP Q9Y4A5.S1628.p_TRRAP Q9Y4A5_S1628s _1_1_1628_1628 Q9Y4A5 Q9Y4A5|F2Z2U4|Q9Y4A5-2 Transformation/transcription domain-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31651.31651.3 15.3 15.3 1.168 7 1 1 0 956.5068 2787.5389 S1628s TMT10 1611 (R) FITLLLPGGAQTAVRPGsPSTSTMR (L) FIT(0.0)LLLPGGAQT(0.0)AVRPGS(0.99)PS(0.0)T(0.0)S(0.0)T(0.0)MR s:Phosphorylated S TRRAP 442042.7 3 1 1141.1 173.21 HUMAN 1 -1.7731 39.8492 QTDGLGLSYLSSHIA-p P06396;S408-p QTDGLGLSYLSSHIA 0.613529584783363 0.980567089569557 0.0826666666666667 0.00300000000000002 3.93610687113017 0.121707929080006 0.0826666666666667 0.00300000000000004 0.404007393441941 0.972364751353091 0.904896531940664 0.0362702965276955 P06396 GSN P06396.S408.p_GSN P06396_S408s _1_1_408_408 P06396 P06396|A0A0A0MT01|A0A0A0MS51|P06396-3|P06396-4|P06396-2 Gelsolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25329.25329.4 20.24 20.24 2.538 5 1 1 0 788.8785 3072.5336 S408s TMT10 395 (K) NWRDPDQTDGLGLsYLSSHIANVER (V) NWRDPDQT(0.0)DGLGLS(0.99)Y(0.0)LS(0.0)S(0.0)HIANVER s:Phosphorylated S GSN 86095.3 1 3 1746.1 117.91 HUMAN 1 3.9361 0.1217 QTDPFNRSPLTMDQI-p Q14139-2;S1041-p QTDPFNRSPLTMDQI 0.343164410890753 0.207393015222146 0.130666666666667 0.152 8.62789161748952 8.98637879227772 0.130666666666667 0.152 0.137154745384119 0.126288010268028 1.74394942596617 1.80535653301614 Q14139 UBE4A Q14139.2.S1041.p_UBE4A Q14139-2_S1041s _1_1_1041_1041 Q14139-2 Q14139-2|B7Z7P0 Isoform 2 of Ubiquitin conjugation factor E4 A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21571.21571.4 7.25 7.25 1.512 5 1 1 0 926.9772 3624.9208 S1041s TMT10 1029 (R) HLLSDQTDPFNRsPLTMDQIRPNTELK (E) HLLS(0.0)DQT(0.0)DPFNRS(0.99)PLT(0.0)MDQIRPNT(0.0)ELK K:TMT10,s:Phosphorylated S UBE4A 124603.5 1 6 1748.1 117.68 HUMAN 1 8.6279 8.9864 QTDSPVESPRLRRES-p O95049-3;S350-p QTDSPVESPRLRRES 0.19060140727462 0.0142333609518056 0.240666666666667 0.407 14.0836510886201 25.611911385069 0.240666666666667 0.407 0.0390512456187188 0.00274668503614477 2.70828992956211 5.19375311511751 O95049 TJP3 O95049.3.S350.p_TJP3 O95049-3_S338sS346sS350s_3_3_338_350 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4304.4304.3 11.11 11.11 1.863 5 3 3 0 850.0202 2308.1479 S338s S346s S350s TMT10 334 (R) HAQRsPEASQTDsPVEsPR (L) HAQRS(0.99)PEAS(0.0)QT(0.0)DS(0.99)PVES(0.99)PR s:Phosphorylated S TJP3 103593.6 4 32 125.1 544.41 HUMAN 1 14.0837 25.6119 QTEETQPSETKEVEP-p P20042;S39-p QTEETQPSETKEVEP 0.562232714290838 0.290920587684824 0.109666666666667 0.177666666666667 4.60436058244042 7.07741218137888 0.109666666666667 0.177666666666667 0.346388880151055 0.196001223273112 1.03102901690226 1.47414532072753 P20042 EIF2S2 P20042.S39.p_EIF2S2 P20042_S39s _1_1_39_39 P20042 P20042 Eukaryotic translation initiation factor 2 subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16619.16619.4 17.51 17.51 1.332 5 1 1 0 916.9688 3584.8812 S39s TMT10 20 (K) KKPFMLDEEGDTQTEETQPsETK (E) KKPFMLDEEGDT(0.0)QT(0.0)EET(0.0)QPS(0.99)ET(0.0)K K:TMT10,s:Phosphorylated S EIF2S2 38730.1 1 2 622.1 259.62 HUMAN 1 4.6044 7.0774 QTEGINISEEALNHL-p Q9Y265;S387-p QTEGINISEEALNHL 0.850659473056698 0.0450884054215957 0.0383333333333333 0.243666666666667 1.35903855410921 18.0110091137806 0.0383333333333333 0.243666666666667 0.731300961773943 0.0158088066784695 0.361663400963558 3.46165750853944 Q9Y265 RUVBL1 Q9Y265.S387.p_RUVBL1 Q9Y265_S387s _1_1_387_387 Q9Y265 Q9Y265 RuvB-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22939.22939.3 15.44 15.44 2.556 3 1 1 0 878.4407 2553.3358 S387s Hydrogen 379 (R) AQTEGINIsEEALNHLGEIGTK (T) AQT(0.0)EGINIS(0.99)EEALNHLGEIGT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S RUVBL1 50569.4 1 4 3456.1 50.49 HUMAN 1 1.359 18.011 QTESRTITPPAAPKP-p Q96BD5-3;T351-p QTESRTITPPAAPKP 0.952027690051184 0.019601203578731 0.014 0.349333333333333 0.423996872885456 23.4462973651908 0.0139999999999999 0.349333333333333 0.906985434575643 0.00452241344377564 0.12241881186783 4.65538604618703 Q96BD5 PHF21A Q96BD5.3.T351.p_PHF21A Q96BD5-3_T351t _1_1_351_351 Q96BD5-3 Q96BD5-3|Q96BD5-2 Isoform 3 of PHD finger protein 21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13555.13767.3 12.83 12.83 2.568 2 1 1 0 630.0477 1808.1613 T351t TMT10 349 (R) TItPPAAPKPK (R) T(0.0)IT(0.99)PPAAPKPK K:TMT10,t:Phosphorylated T PHF21A 75608.5 2 1 3097.1 60.75 HUMAN 1 0.424 23.4463 QTESSTGSVGSNRVR-p Q9BRX2;S55-p QTESSTGSVGSNRVR 0.960338220515773 0.0434891171811701 -0.00866666666666666 -0.267666666666667 0.338897528364641 18.243772231436 -0.00866666666666665 -0.267666666666667 0.924932941580313 0.0149838279222151 -0.098695701445927 -3.50884738166536 Q9BRX2 PELO Q9BRX2.S55.p_PELO Q9BRX2_S55s _1_1_55_55 Q9BRX2 Q9BRX2 Protein pelota homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5541.5541.2 13.13 8.55 1.117 6 1 1 0 859.4023 1637.8292 S55s TMT10 47 (K) VQTESSTGsVGSNR (V) VQT(0.0)ES(0.0)S(0.0)T(0.0)GS(0.99)VGS(0.0)NR s:Phosphorylated S PELO 43814.8 4 1 4101.1 37.65 HUMAN 1 -0.3389 -18.2438 QTFETHNSTTPLQER-p Q96H22-3;S218-p QTFETHNSTTPLQER 0.806340238065947 0.178464205588341 0.0403333333333333 0.167333333333333 1.8008450300644 9.84641500029804 0.0403333333333333 0.167333333333333 0.66056490584613 0.103599700518197 0.464231661847799 1.95426279715862 Q96H22 CENPN Q96H22.3.S218.p_CENPN Q96H22-3_S218s _1_1_218_218 Q96H22-3 Q96H22-3|Q96H22-4 Isoform 3 of Centromere protein N HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11195.11195.3 20.64 20.64 1.613 6 1 1 0 835.0526 2423.1789 S218s TMT10 208 (K) QYNQTFETHNsTTPLQER (S) QY(0.0)NQT(0.0)FET(0.0)HNS(0.99)T(0.0)T(0.0)PLQER s:Phosphorylated S CENPN 41478.9 1 1 2611.1 76.75 HUMAN 1 1.8008 9.8464 QTGGLGISIAGGKGS-p A0A0G2JPP5;S741-p QTGGLGISIAGGKGS 0.472747504381845 0.143120827460893 -0.115333333333333 0.452 5.99527881506774 11.1242785741724 -0.115333333333333 0.452 0.25146185704532 0.0771919731946052 -1.28372249284458 2.17690206574666 A0A0G2JPP5 SCRIB A0A0G2JPP5.S741.p_SCRIB A0A0G2JPP5_S741s _1_1_741_741 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20184.20184.3 11.88 10.31 7.832 2 1 1 0 566.3183 1616.9736 S741s TMT10 734 (R) QTGGLGIsIAGGK (G) QT(0.0)GGLGIS(0.99)IAGGK K:TMT10,s:Phosphorylated S SCRIB 178690.9 2 14 22.1 1004.81 HUMAN 1 -5.9953 11.1243 QTHTKHPTPERGSRD-p Q8IYW5;T509-p QTHTKHPTPERGSRD 0.325038366971884 0.000952253650599092 0.417666666666667 -1.553 9.14185433752833 54.401863091163 0.417666666666667 -1.553 0.121846922950976 3.62922330378294e-06 1.83292142889005 -18.9737065079693 Q8IYW5 RNF168 Q8IYW5.T509.p_RNF168 Q8IYW5_T509t _1_1_509_509 Q8IYW5 Q8IYW5 E3 ubiquitin-protein ligase RNF168 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.2818.2818.5 11.87 11.87 3.688 4 1 1 0 434.8313 2090.1619 T509t TMT10 502 (R) QTHTKHPtPERGSR (D) QT(0.0)HT(0.0)KHPT(0.99)PERGS(0.0)R K:TMT10,t:Phosphorylated T RNF168 66159.9 2 9 1172.1 170.1 HUMAN 1 9.1419 -54.4019 QTIERMGSGVERMGP-p P52272;S513-p QTIERMGSGVERMGP 0.268803950310253 0.00894429082981089 0.234333333333333 0.462666666666667 10.8188785847549 29.022047166979 0.234333333333333 0.462666666666667 0.0828155978735483 0.00125255061144091 2.12440773301912 6.13070706523624 P52272 HNRNPM P52272.S513.p_HNRNPM P52272_S513s _1_1_513_513 P52272 P52272|A0A087X0X3|P52272-2 Heterogeneous nuclear ribonucleoprotein M HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6257.6257.2 7.72 2.82 99 1 1 1 0 522.7414 964.5083 S513s TMT10 511 (R) MGsGVER (M) MGS(1.0)GVER s:Phosphorylated S HNRNPM 77799.7 1 10 830.1 216.57 HUMAN 1 10.8189 29.022 QTKGTGASGSFKLNK-p P16402;S103-p QTKGTGASGSFKLNK 0.823880329991928 0.663769132159826 -0.0326666666666667 0.0516666666666667 1.62228302534209 2.4367242032971 -0.0326666666666667 0.0516666666666667 0.688290376601389 0.5705944980604 -0.423428229065636 0.603407835776067 P16402 HIST1H1D P16402.S103.p_HIST1H1D P16402_S103s _1_1_103_103 P16402 P16401|P16402|P10412|Q02539|P16403|P22492 Histone H1.3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9763.9763.3 7.41 7.41 1.11 3 1 1 0 450.567 1269.7203 S103s TMT10 99 (K) GTGAsGSFK (L) GT(0.0)GAS(0.99)GS(0.0)FK K:TMT10,s:Phosphorylated S HIST1H1D 22349.5 2 21 738.1 234.77 HUMAN 1 -1.6223 2.4367 QTKTLRDSPNVEAAH-p Q9UHF7-2;S843-p QTKTLRDSPNVEAAH 0.881795626062222 0.120659351292129 -0.0316666666666667 -0.168666666666667 1.07470760474868 12.1110953366144 -0.0316666666666666 -0.168666666666667 0.780781005616595 0.0615021738160556 -0.292514469957283 -2.35086962416616 Q9UHF7 TRPS1 Q9UHF7.2.S843.p_TRPS1 Q9UHF7-2_S843s _1_1_843_843 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3|E5RJ97 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8986.8986.4 23.28 23.28 1.709 2 1 1 0 490.5056 1879.0347 S843s TMT10 839 (K) TLRDsPNVEAAHLAR (P) T(0.0)LRDS(0.99)PNVEAAHLAR s:Phosphorylated S TRPS1 145246 6 27 14.1 1150.14 HUMAN 1 -1.0747 -12.1111 QTKVKHRTPMVSVPK-p Q9BZF1;T774-p QTKVKHRTPMVSVPK 0.82619699417303 0.131881371688139 0.037 0.237666666666667 1.59960578782568 11.5997493906754 0.037 0.237666666666667 0.691893771755907 0.0691870894128214 0.418185524098959 2.26045187808489 Q9BZF1 OSBPL8 Q9BZF1.T774.p_OSBPL8 Q9BZF1_T774t _1_1_774_774 Q9BZF1 Q9BZF1|Q9BZF1-2|Q9BZF1-3 Oxysterol-binding protein-related protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8780.8780.3 11.55 9.8 5.024 2 1 1 0 563.9815 1609.9612 T774t TMT10 772 (K) HRtPMVSVPK (M) HRT(0.99)PMVS(0.0)VPK K:TMT10,t:Phosphorylated T OSBPL8 101821.3 2 8 1293.1 156.92 HUMAN 1 1.5996 11.5997 QTLAALLSPKESSGG-p P18583-5;S1697-p QTLAALLSPKESSGG 0.331509205095072 0.172383531585638 -0.152333333333333 -0.145 8.95749789172332 10.0371982813277 -0.152333333333333 -0.145 0.127130633416548 0.0991471356192188 -1.8010054070958 -1.98736678035515 P18583 SON P18583.5.S1697.p_SON P18583-5_S1697s _1_1_1697_1697 P18583-5 P18583-5|P18583-7|P18583-4|P18583-3|P18583-10 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29315.29315.4 22.94 22.94 8.213 4 1 1 0 787.9302 3068.7334 S1697s TMT10 1678 (K) DTEEPLPVKESDQTLAALLsPK (E) DT(0.0)EEPLPVKES(0.0)DQT(0.0)LAALLS(0.99)PK K:TMT10,s:Phosphorylated S SON 267429.6 21 24 45.1 778.56 HUMAN 1 -8.9575 -10.0372 QTLALAGSPAPSGHP-p Q9NZT2;S484-p QTLALAGSPAPSGHP 0.207735478203539 0.704737453630861 0.27 -0.0533333333333333 13.1680073133261 2.08755336960755 0.27 -0.0533333333333333 0.0482168981948793 0.618364662381001 2.54138548013726 -0.528042921092609 Q9NZT2 OGFR Q9NZT2.S484.p_OGFR Q9NZT2_S484s _1_1_484_484 Q9NZT2 Q9NZT2|Q9NZT2-2|A0A0A0MRN5 Opioid growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16064.16064.4 33.21 28.27 3.342 5 1 1 0 936.2422 3661.9753 S484s TMT10 460 (R) KVDEGAGDSAAVASGGAQTLALAGsPAPSGHPK (A) KVDEGAGDS(0.0)AAVAS(0.0)GGAQT(0.0)LALAGS(0.99)PAPS(0.0)GHPK K:TMT10,s:Phosphorylated S OGFR 73893.9 10 6 620.1 259.74 HUMAN 1 13.168 -2.0876 QTLFGFDSDDESA__-p A0A1B0GWA0;S1123-p QTLFGFDSDDESA__ 0.301898438592857 0.713481937196831 0.204666666666667 -0.036 9.74702706710018 2.0184656038588 0.204666666666667 -0.036 0.105997907824303 0.628280295914078 1.93779201783237 -0.512827763897701 A0A1B0GWA0 NotFound A0A1B0GWA0.S1123.p_NotFound A0A1B0GWA0_S1123s _1_1_1123_1123 A0A1B0GWA0 A0A1B0GWA0|Q8IZM8 Zinc finger protein 654 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26901.27107.2 10.61 10.61 1.179 3 1 1 0 950.8789 1820.7846 S1123s TMT10 1115 (K) CQTLFGFDsDDESA (-) CQT(0.0)LFGFDS(0.99)DDES(0.0)A C:Carbamidomethylation,s:Phosphorylated S ZNF654 130327.2 4 3 2529.1 79.79 HUMAN 1 9.747 -2.0185 QTLIGACSPPVPLLE-p Q9UHJ3;S143-p QTLIGACSPPVPLLE 0.314605425744953 0.235626283639957 0.174 0.16 9.39598912387394 8.26754100450276 0.174 0.16 0.114921447520109 0.149020459964061 1.87693536854352 1.68099108281849 Q9UHJ3 SFMBT1 Q9UHJ3.S143.p_SFMBT1 Q9UHJ3_S143s _1_1_143_143 Q9UHJ3 Q9UHJ3|Q9UHJ3-2 Scm-like with four MBT domains protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.33179.33179.3 13.86 13.86 6.262 2 1 1 0 744.067 2150.2205 S143s TMT10 136 (R) QTLIGACsPPVPLLEGLR (N) QT(0.0)LIGACS(0.99)PPVPLLEGLR C:Carbamidomethylation,s:Phosphorylated S SFMBT1 99737.2 1 1 3632.1 46.53 HUMAN 1 9.396 8.2675 QTLKMRISDQNIIPS-p Q6Y7W6-5;S665-p QTLKMRISDQNIIPS 0.971623711929894 0.0196442489819218 -0.00833333333333335 -0.361 0.242898172700894 23.4273803037062 -0.00833333333333336 -0.361 0.945605920583389 0.0045421552017794 -0.0714502430895254 -4.65085822693981 Q6Y7W6 GIGYF2 Q6Y7W6.5.S665.p_GIGYF2 Q6Y7W6-5_S665s _1_1_665_665 Q6Y7W6-5 Q6Y7W6-5|Q6Y7W6-4 Isoform 4 of GRB10-interacting GYF protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20281.20281.3 12.16 12.16 8.688 3 1 1 0 647.004 1859.037 S665s TMT10 662 (K) MRIsDQNIIPSVTR (S) MRIS(0.99)DQNIIPS(0.0)VT(0.0)R s:Phosphorylated S GIGYF2 149826.1 1 13 470.1 302.35 HUMAN 1 -0.2429 -23.4274 QTLLPDLSLPDLSEN-p P35408;S400-p QTLLPDLSLPDLSEN 0.216762007264091 0.169155989153778 0.186333333333333 0.166 12.7924666408446 10.1499925500551 0.186333333333333 0.166 0.0525718591797329 0.0966052536167671 2.47373691228142 2.0069564078658 P35408 PTGER4 P35408.S400.p_PTGER4 P35408_S400s _1_1_400_400 P35408 P35408 Prostaglandin E2 receptor EP4 subtype HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.34207.34207.4 22.65 22.65 4.773 7 1 1 0 752.8817 2928.5363 S400s TMT10 387 (K) EISSTSQTLLPDLsLPDLSENGLGGR (N) EIS(0.0)S(0.0)T(0.0)S(0.0)QT(0.0)LLPDLS(0.99)LPDLS(0.0)ENGLGGR s:Phosphorylated S PTGER4 53860.3 3 3 3930.1 40.55 HUMAN 1 12.7925 10.15 QTLQANESASDILIL-p A0A1C7CYX1;S979-p QTLQANESASDILIL 0.316747759090326 0.557377336369019 0.144666666666667 -0.0716666666666667 9.34952594158389 3.42175242776074 0.144666666666667 -0.0716666666666667 0.11615753998265 0.454804504315092 1.86888621089192 -0.804724671279626 A0A1C7CYX1 NotFound A0A1C7CYX1.S979.p_NotFound A0A1C7CYX1_S979s _1_1_979_979 A0A1C7CYX1 A0A1C7CYX1|Q6PJG2 ELM2 and SANT domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25181.25181.3 17.05 16.46 2.501 4 1 1 0 751.7272 2173.2026 S979s TMT10 970 (K) ATQTLQANEsASDILILR (S) AT(0.0)QT(0.0)LQANES(0.99)AS(0.0)DILILR s:Phosphorylated S ELMSAN1 121244.8 1 11 548.1 275.48 HUMAN 1 9.3495 -3.4218 QTMDMIISKKKRMAM-p P0CG08;S202-p QTMDMIISKKKRMAM 0.76863907957993 0.279232525043709 0.0603333333333333 0.141666666666667 2.19157485319446 7.29998757550439 0.0603333333333333 0.141666666666667 0.603729663205341 0.186209246381472 0.550821763460671 1.51299286990458 P0CG08 GPR89B P0CG08.S202.p_GPR89B P0CG08_S202s _1_1_202_202 P0CG08 P0CG08|B7ZAQ6-3|B7ZAQ6-2|E9PKY3 Golgi pH regulator B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.34025.34025.3 15.41 13.95 8.354 2 1 1 0 611 1751.0211 S202s TMT10 193 (R) LLQTMDMIIsK (K) LLQT(0.0)MDMIIS(0.99)K K:TMT10,s:Phosphorylated S GPR89B 53201.3 1 1 4909.1 25.17 HUMAN 1 2.1916 7.3 QTMERIGSGVERMGA-p P52272;S481-p QTMERIGSGVERMGA 0.349528231300178 0.0676290831733223 0.253333333333333 0.373666666666667 8.48015899927052 15.5644296758337 0.253333333333333 0.373666666666667 0.14190055696174 0.0277687948750911 1.71837091785302 2.98295898138599 P52272 HNRNPM P52272.S481.p_HNRNPM P52272_S481s _1_1_481_481 P52272 P52272|A0A087X0X3|P52272-2 Heterogeneous nuclear ribonucleoprotein M HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7878.7878.2 9.53 2.81 99 1 1 1 0 513.7637 946.5519 S481s TMT10 479 (R) IGsGVER (M) IGS(1.0)GVER s:Phosphorylated S HNRNPM 77799.7 1 9 830.1 216.57 HUMAN 1 8.4802 15.5644 QTPLTEGSEDLDGHS-p Q86VR2;S313-p QTPLTEGSEDLDGHS 0.976488348265493 0.0445689985326577 -0.00483333333333333 0.302833333333333 0.20295302009211 18.0861430639344 -0.00483333333333334 0.302833333333333 0.954343451885471 0.015537662853555 -0.0599550491316838 3.47685639041568 Q86VR2 FAM134C Q86VR2.S313.p_FAM134C Q86VR2_S313sS320s_2_2_313_320 Q86VR2 Q86VR2|K7EQI9|Q86VR2-2 Reticulophagy regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17836.17836.4 21.79 21.79 2.718 5 2 2 0 741.5602 2803.2856 S313s S320s TMT10 305 (R) GQTPLTEGsEDLDGHsDPEESFAR (D) GQT(0.0)PLT(0.0)EGS(0.99)EDLDGHS(0.99)DPEES(0.0)FAR s:Phosphorylated S RETREG3 51794.7 5 10 1136.1 173.56 HUMAN 2 -0.203 18.0861 QTPPARQSPPARQTP-p Q9Y5V3-2;S378-p QTPPARQSPPARQTP 0.276681989522621 0.198772906970298 -0.172666666666667 0.136666666666667 10.5526114617968 9.23270751005455 -0.172666666666667 0.136666666666667 0.0880519247615265 0.119324397174916 -2.07790320566058 1.84796973537439 Q9Y5V3 MAGED1 Q9Y5V3.2.S378.p_MAGED1 Q9Y5V3-2_S378s _1_1_378_378 Q9Y5V3-2 Q9Y5V3-2 Isoform 2 of Melanoma-associated antigen D1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3748.3748.3 11.2 6.89 4.559 2 1 1 0 538.9489 1534.8651 S378s TMT10 371 (R) QTPPARQsPPAR (Q) QT(0.0)PPARQS(0.99)PPAR s:Phosphorylated S MAGED1 92356.3 2 3 2763.1 71.4 HUMAN 1 -10.5526 9.2327 QTPPGVATPPIPKIT-p Q15648;T1057-p QTPPGVATPPIPKIT 0.205752426885416 0.0202062164760444 -0.255666666666667 0.419333333333333 13.2771442026641 23.2067303994888 -0.255666666666667 0.419333333333333 0.0470203199257117 0.00477888918529113 -2.56112883043855 4.59825910612379 Q15648 MED1 Q15648.T1057.p_MED1 Q15648_T1057t _1_1_1057_1057 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17807.18012.3 7.13 7.13 7.128 3 1 1 0 643.3608 1848.0995 T1057t TMT10 1049 (R) SQTPPGVAtPPIPK (I) S(0.0)QT(0.0)PPGVAT(0.99)PPIPK K:TMT10,t:Phosphorylated T MED1 169445 1 12 115.1 566.87 HUMAN 1 -13.2771 23.2067 QTPTHPLTPRARKRL-p Q13415;T230-p QTPTHPLTPRARKRL 0.252409750747624 0.0131932133104267 -0.21 -0.572666666666667 11.4027870596631 26.1694825310211 -0.21 -0.572666666666667 0.0723971206639276 0.00241574865770127 -2.22683083827914 -5.33912637074859 Q13415 ORC1 Q13415.T230.p_ORC1 Q13415_T230t _1_1_230_230 Q13415 Q13415 Origin recognition complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5363.5363.2 13.62 8.03 2.76 3 1 1 0 728.8799 1376.7848 T230t TMT10 223 (R) QTPTHPLtPR (A) QT(0.0)PT(0.0)HPLT(0.99)PR t:Phosphorylated T ORC1 98432 5 2 939.1 198.15 HUMAN 1 -11.4028 -26.1695 QTQRQPGSPMYRREG-p Q9P275-2;S871-p QTQRQPGSPMYRREG 0.363321260043457 0.0149024519719648 -0.158333333333333 -0.414 8.16392780338015 25.2877753156991 -0.158333333333333 -0.414 0.15261851365424 0.00295952810396671 -1.6635863183035 -5.11055806827221 Q9P275 USP36 Q9P275.2.S871.p_USP36 Q9P275-2_S871s _1_1_871_871 Q9P275-2 Q9P275-2|A0A075B784 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10416.10416.4 14.63 14.63 2.59 5 1 1 0 860.9318 3360.7483 S871s TMT10 850 (K) KRPEDTAASALQEGQTQRQPGsPMYR (R) KRPEDT(0.0)AAS(0.0)ALQEGQT(0.0)QRQPGS(0.99)PMY(0.0)R K:TMT10,s:Phosphorylated S USP36 124218 5 16 241.1 413.35 HUMAN 1 -8.1639 -25.2878 QTSKTPITPQDINRP-p Q6KC79;T406-p QTSKTPITPQDINRP 0.575281775131801 0.278813168215169 -0.0863333333333333 0.110666666666667 4.41559984668824 7.30759904232418 -0.0863333333333334 0.110666666666667 0.361776218820931 0.185883180939989 -0.995783955925055 1.51431964008163 Q6KC79 NIPBL Q6KC79.T406.p_NIPBL Q6KC79_T406t_1_1_406_406 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30177.30177.5 24.71 24.71 1.33 6 1 1 0 1068.7568 5258.7996 T406t N432n TMT10 403 (K) TPItPQDINRPLNAAQCLSQQEQTAFLPAnQVPVLQQNTSVAAK (Q) T(0.0)PIT(0.99)PQDIN(0.0)RPLN(0.0)AAQCLS(0.0)QQEQT(0.0)AFLPAN(0.99)QVPVLQQN(0.0)T(0.0)S(0.0)VAAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,n:Deamidated NIPBL 318099.5 2 9 50.1 752.87 HUMAN 1 -4.4156 7.3076 QTSQSPPSPELTSEE-p Q92598;S557-p QTSQSPPSPELTSEE 0.180503883126608 0.00778808550426966 -0.700666666666667 0.487666666666667 14.6657841192816 30.0908315380313 -0.700666666666667 0.487666666666667 0.0341524282863135 0.000979302461680201 -2.81600056744393 6.44954322385309 Q92598 HSPH1 Q92598.S557.p_HSPH1 Q92598_S557s _1_1_557_557 Q92598 Q92598-4|Q92598-3|A0A0A0MSM0 Heat shock protein 105 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17116.17116.4 23.78 23.78 3.442 9 1 1 0 1351.9109 5324.6245 S557s TMT10 530 (K) NVQQDNSEAGTQPQVQTDAQQTSQSPPsPELTSEENKIPDADK (A) NVQQDNS(0.0)EAGT(0.0)QPQVQT(0.0)DAQQT(0.0)S(0.0)QS(0.0)PPS(0.99)PELT(0.0)S(0.0)EENKIPDADK K:TMT10,s:Phosphorylated S HSPH1 97776.1 2 23 549.2 274.67 HUMAN 1 -14.6658 30.0908 QTSVRDPSPEADAPV-p O15234;S363-p QTSVRDPSPEADAPV 0.145061462165488 0.00935165792873663 -0.247 0.563666666666667 17.121919922224 28.6404532772914 -0.247 0.563666666666667 0.0194002804344157 0.00136758608188358 -3.28668667520969 6.01993163060857 O15234 CASC3 O15234.S363.p_CASC3 O15234_S363s _1_1_363_363 O15234 O15234 Protein CASC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17947.17947.4 18.42 18.42 3.27 4 1 1 0 740.8815 2880.5355 S363s TMT10 354 (R) LEQTSVRDPsPEADAPVLGSPEK (E) LEQT(0.0)S(0.0)VRDPS(0.99)PEADAPVLGS(0.0)PEK K:TMT10,s:Phosphorylated S CASC3 76390.7 3 8 323.1 362.08 HUMAN 1 -17.1219 28.6405 QTTARVGSPLTLTDA-p Q99569;S314-p QTTARVGSPLTLTDA 0.358160899463675 0.0231460767286688 0.15 0.318666666666667 8.28352654603444 22.3256907260357 0.15 0.318666666666667 0.148472952669814 0.0058537062832461 1.6843125175708 4.39207309922238 Q99569 PKP4 Q99569.S314.p_PKP4 Q99569_S314s _1_1_314_314 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17603.17603.3 15.42 15.42 2.562 4 1 1 0 556.6238 1587.8904 S314s TMT10 312 (R) VGsPLTLTDAQTR (V) VGS(0.99)PLT(0.0)LT(0.0)DAQT(0.0)R s:Phosphorylated S PKP4 132664.7 4 11 122.1 546.31 HUMAN 1 8.2835 22.3257 QTTSAVSTPASSETS-p P49792;T1644-p QTTSAVSTPASSETS 0.331336681003484 0.0140567515382886 0.302333333333333 -0.476 8.96166468424666 25.686790235746 0.302333333333333 -0.476 0.127008717768146 0.00269973400263023 1.80172669984326 -5.21310839995294 P49792 RANBP2 P49792.T1644.p_RANBP2 P49792_T1644t_1_1_1644_1644 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8524.8524.4 8 8 2.454 9 1 1 0 722.8819 2807.5354 N1636n T1644t TMT10 1635 (K) QnQTTSAVStPASSETSKAPK (S) QN(1.0)QT(0.0)T(0.0)S(0.0)AVS(0.0)T(0.99)PAS(0.0)S(0.0)ET(0.0)S(0.0)KAPK K:TMT10,n:Deamidated,t:Phosphorylated T RANBP2 362585.9 1 33 9.1 1298.62 HUMAN 1 8.9617 -25.6868 QTTTERDSDTDVEEE-p Q14676;S453-p QTTTERDSDTDVEEE 0.619741134857635 0.0128852408631601 0.128 0.461 3.86285758043357 26.314555962722 0.128 0.461 0.410879280884229 0.00233638496986094 0.890822262726666 5.37742869152395 Q14676 MDC1 Q14676.S453.p_MDC1 Q14676_S453s _1_1_453_453 Q14676 Q14676|Q14676-2|Q14676-3 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16082.16082.4 16.14 16.14 1.438 6 1 1 0 940.2084 3677.8394 S453s TMT10 445 (R) SQTTTERDsDTDVEEEELPVENREAVLK (D) S(0.0)QT(0.0)T(0.0)T(0.0)ERDS(0.99)DT(0.0)DVEEEELPVENREAVLK K:TMT10,s:Phosphorylated S MDC1 227803.2 6 13 6.1 1662.62 HUMAN 1 3.8629 26.3146 QTVLVQDSPPATAAA-p Q02086-2;S364-p QTVLVQDSPPATAAA 0.174901091255702 0.964893835699154 0.279333333333333 -0.00666666666666662 15.0853411795311 0.222230699836429 0.279333333333333 -0.00666666666666661 0.0310074378611264 0.950116652647953 2.8944723604683 -0.0655085898618178 Q02086 SP2 Q02086.2.S364.p_SP2 Q02086-2_S364s _1_1_364_364 Q02086-2 Q02086|Q02086-2 Isoform 2 of Transcription factor Sp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17791.17791.3 29.17 29.54 4.36 12 1 1 0 1199.9016 3517.7278 S364s TMT10 351 (R) TPSGEVQTVLVQDsPPATAAATSNTTCSSPASR (A) T(0.0)PS(0.0)GEVQT(0.0)VLVQDS(0.99)PPAT(0.0)AAAT(0.0)S(0.0)NT(0.0)T(0.0)CS(0.0)S(0.0)PAS(0.0)R C:Carbamidomethylation,s:Phosphorylated S SP2 64779.7 2 9 950.1 196.36 HUMAN 1 15.0853 -0.2222 QTVPADASPDSKCPI-p Q9NS56;S98-p QTVPADASPDSKCPI 0.328843621955026 0.495971742906371 -0.161333333333333 -0.0673333333333333 9.02996867439165 4.07303017140609 -0.161333333333333 -0.0673333333333334 0.125026804835348 0.391468645218787 -1.81355081995258 -0.930904091716399 Q9NS56 TOPORS Q9NS56.S98.p_TOPORS Q9NS56_S98s _1_1_98_98 Q9NS56 Q9NS56|Q9NS56-2 E3 ubiquitin-protein ligase Topors HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18394.18394.3 17.73 13.07 3.522 3 1 1 0 970.4833 2829.4639 S98s TMT10 89 (K) LQQTVPADAsPDSKCPICLDR (F) LQQT(0.0)VPADAS(0.99)PDS(0.0)KCPICLDR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TOPORS 120222.5 7 3 580.1 266.48 HUMAN 1 -9.03 -4.073 QTVRIERSPLLDQVQ-p Q8N5I9;S66-p QTVRIERSPLLDQVQ 0.754944996958228 0.00608892743356031 -0.0443333333333333 -0.560333333333333 2.33361659725572 31.9694946317757 -0.0443333333333333 -0.560333333333333 0.584303301573862 0.00063540486664946 -0.58147878451545 -7.0423210383961 Q8N5I9 C12orf45 Q8N5I9.S66.p_C12orf45 Q8N5I9_S66s _1_1_66_66 Q8N5I9 A0A087WT30|Q8N5I9 Uncharacterized protein C12orf45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30641.30641.3 20.71 20.71 15.455 2 1 1 0 851.115 2471.3642 S66s TMT10 63 (R) IERsPLLDQVQTFLPQMAR (A) IERS(0.99)PLLDQVQT(0.0)FLPQMAR s:Phosphorylated S C12orf45 20180 3 5 1631.1 125.15 HUMAN 1 -2.3336 -31.9695 QVAALQASPPLDQDD-p A0A1B0GTW1;S189-p QVAALQASPPLDQDD 0.504415768221718 0.0439711539603473 -0.0916666666666667 -0.285666666666667 5.48827158038442 18.1714634556368 -0.0916666666666667 -0.285666666666667 0.282600445378546 0.0152353927551499 -1.19283173461956 -3.49415466349907 A0A1B0GTW1 NotFound A0A1B0GTW1.S189.p_NotFound A0A1B0GTW1_S189s _1_1_189_189 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27033.27033.4 23.96 23.96 99 1 1 1 0 947.2211 3705.8947 S189s TMT10 180 (R) KVQVAALQAsPPLDQDDRAFEVMDEFDGR (S) KVQVAALQAS(1.0)PPLDQDDRAFEVMDEFDGR K:TMT10,s:Phosphorylated S TJP2 141123.7 10 1 41.1 827.72 HUMAN 1 -5.4883 -18.1715 QVAGGQLSFKGKSLK-p P46060;S24-p QVAGGQLSFKGKSLK 0.78776392544686 0.726507044659559 0.0436666666666667 0.0336666666666667 2.00063501853737 1.90907024246819 0.0436666666666667 0.033836510358129 0.630865093637616 0.644307186986854 0.508942665140367 0.488513700823363 P46060 RANGAP1 P46060.S24.p_RANGAP1 P46060_S24s _1_1_24_24 P46060 P46060 Ran GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17325.17325.2 7 7 6.998 2 1 1 0 837.4556 1593.9365 S24s TMT10 16 (K) TQVAGGQLsFK (G) T(0.0)QVAGGQLS(0.99)FK K:TMT10,s:Phosphorylated S RANGAP1 63997.2 1 2 2420.1 84.21 HUMAN 1 2.0006 1.9091 QVATGMGSNQITFGR-p O95208-2;S163-p QVATGMGSNQITFGR 0.935758306743397 0.543408214995881 -0.0123333333333333 0.0686666666666667 0.564989376724045 3.56118640582821 -0.0123333333333333 0.0686666666666667 0.8780132348018 0.440434529149672 -0.160893913113335 0.832132180437563 O95208 EPN2 O95208.2.S163.p_EPN2 O95208-2_S163s _1_1_163_163 O95208-2 O95208|O95208-2|I3L2B2|O95208-3|E9PBC1 Isoform 2 of Epsin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21421.21421.3 14.17 14.17 1.745 3 1 1 0 693.3301 1998.0098 S163s TMT10 154 (R) MAQVATGMGsNQITFGR (G) MAQVAT(0.0)GMGS(0.99)NQIT(0.0)FGR s:Phosphorylated S EPN2 62355.6 1 1 1459.1 140.33 HUMAN 1 -0.565 3.5612 QVDKLTLSGSDSVIL-p Q13530;S367-p QVDKLTLSGSDSVIL 0.19531414741951 0.0886642515243664 0.273 0.2 13.8308253695734 13.9258261625847 0.273 0.2 0.0413921002333374 0.0404964900944659 2.66190998368419 2.67771413327024 Q13530 SERINC3 Q13530.S367.p_SERINC3 Q13530_S367s _1_1_367_367 Q13530 Q13530|Q13530-2 Serine incorporator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19647.19647.4 11.44 11.44 1.197 13 1 1 0 1116.5397 4383.18 S367s TMT10 355 (R) TSTNSQVDKLTLsGSDSVILGDTTTSGASDEEDGQPRR (A) T(0.0)S(0.0)T(0.0)NS(0.0)QVDKLT(0.0)LS(0.99)GS(0.0)DS(0.0)VILGDT(0.0)T(0.0)T(0.0)S(0.0)GAS(0.0)DEEDGQPRR K:TMT10,s:Phosphorylated S SERINC3 53435.3 2 1 4197.1 35.57 HUMAN 1 13.8308 13.9258 QVDLEGGSDSDNPQT-p Q8WU20;S445-p QVDLEGGSDSDNPQT 0.51428507339171 0.817204828436607 0.122 -0.025 5.33246743543282 1.22756631940519 0.122 -0.025 0.292922853704658 0.753777844166172 1.16465052710793 -0.329992103818393 Q8WU20 FRS2 Q8WU20.S445.p_FRS2 Q8WU20_S445sS447s_2_2_445_447 Q8WU20 Q8WU20 Fibroblast growth factor receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23070.23070.5 11.9 11.9 11.9 9 2 2 0 897.4458 4323.2621 S445s S447s TMT10 433 (R) QLNYIQVDLEGGsDsDNPQTPKTPTTPLPQTPTRR (T) QLNY(0.0)IQVDLEGGS(0.99)DS(0.99)DNPQT(0.0)PKT(0.0)PT(0.0)T(0.0)PLPQT(0.0)PT(0.0)RR K:TMT10,s:Phosphorylated S FRS2 57427.4 1 18 301.1 376.53 HUMAN 1 5.3325 -1.2276 QVEARLQSVLGKVNE-p Q13561;S285-p QVEARLQSVLGKVNE 0.187254795627764 0.162467371560855 -0.234333333333333 -0.163 14.2844039111586 10.3764580297611 -0.234333333333333 -0.163 0.0372871859782015 0.091696803575193 -2.74528664941876 -2.04633388760776 Q13561 DCTN2 Q13561.S285.p_DCTN2 Q13561_S285s _1_1_285_285 Q13561 Q13561-2|Q13561-3|F8W1I6 Dynactin subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21528.21528.2 8.35 2.31 99 1 1 1 0 641.8808 1202.7873 S285s TMT10 283 (R) LQsVLGK (V) LQS(1.0)VLGK K:TMT10,s:Phosphorylated S DCTN2 44344.3 1 6 1016.1 188.09 HUMAN 1 -14.2844 -10.3765 QVEELYHSLLELGEK-p A0A0D9SGF6;S1075-p QVEELYHSLLELGEK 0.685573827086692 0.197546519409466 -0.0643333333333333 0.159333333333333 3.07580570603866 9.26794310553681 -0.0643333333333333 0.159333333333333 0.492514963166743 0.118360199756048 -0.735767679240313 1.85406673545328 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.S1075.p_SPTAN1 A0A0D9SGF6_S1075s_1_1_1075_1075 A0A0D9SGF6 A0A0D9SGF6|Q13813-2 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33759.33759.3 19.91 16.18 5.374 2 1 1 0 693.6792 2016.0851 Q1068q S1075s Hydrogen 1068 (K) qVEELYHsLLELGEK (R) Q(1.0)VEELY(0.0)HS(0.99)LLELGEK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S SPTAN1 288398.5 3 6 263.1 396.39 HUMAN 1 -3.0758 9.2679 QVEILEGSPEKLPRW-p Q13608;S371-p QVEILEGSPEKLPRW 0.2592179584854 0.490518417207478 0.175333333333333 -0.0706666666666667 11.1395582467891 4.13466336744925 0.175333333333333 -0.0706666666666666 0.076920867824182 0.385952326568631 2.18057698286707 -0.942621041028325 Q13608 PEX6 Q13608.S371.p_PEX6 Q13608_S371s _1_1_371_371 Q13608 Q13608|Q13608-3|Q13608-2 Peroxisome assembly factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.31961.31961.5 26.32 26.32 4.594 2 1 1 0 720.7891 3519.9497 S371s TMT10 350 (R) VVQEGDVLCVPTIGQVEILEGsPEKLPR (W) VVQEGDVLCVPT(0.0)IGQVEILEGS(0.99)PEKLPR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PEX6 105257.3 2 1 4814.1 26.32 HUMAN 1 11.1396 -4.1347 QVEKEDFSDMVAEHA-p Q13435;S861-p QVEKEDFSDMVAEHA 0.336373364158747 0.00752314179680432 0.210666666666667 0.480666666666667 8.82132223968683 30.3464695055912 0.210666666666667 0.480666666666667 0.131180045146467 0.000923321714727984 1.77743343072269 6.52772969677561 Q13435 SF3B2 Q13435.S861.p_SF3B2 Q13435_S861s _1_1_861_861 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17374.17374.4 18.72 18.72 99 1 1 1 0 790.144 3077.5817 S861s TMT10 850 (R) EQQAQVEKEDFsDMVAEHAAK (Q) EQQAQVEKEDFS(1.0)DMVAEHAAK K:TMT10,s:Phosphorylated S SF3B2 100339.9 4 14 193.1 462.57 HUMAN 1 8.8213 30.3465 QVEPEDGSDVSPGPN-p Q96JN0-3;S1274-p QVEPEDGSDVSPGPN 0.796323249979386 0.380728624405919 -0.0423333333333334 0.142333333333333 1.90777625251447 5.57372509718268 -0.0423333333333334 0.142333333333333 0.64449918833146 0.277094234992044 -0.488280163716147 1.20796644254088 Q96JN0 LCOR Q96JN0.3.S1274.p_LCOR Q96JN0-3_S1274sS1277s_2_2_1274_1277 Q96JN0-3 Q96JN0-3 Isoform 3 of Ligand-dependent corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18149.18149.4 18.02 15.97 4.941 4 2 2 0 1080.7316 4159.958 S1274s S1277s TMT10 1261 (K) FRENPDQVEPEDGsDVsPGPNSEDSIEEVKEDR (N) FRENPDQVEPEDGS(0.99)DVS(0.99)PGPNS(0.0)EDS(0.0)IEEVKEDR K:TMT10,s:Phosphorylated S LCOR 172300.7 2 19 673.1 247.79 HUMAN 1 -1.9078 5.5737 QVEQSSASQTGIKQL-p Q9H4A3-7;S599-p QVEQSSASQTGIKQL 0.401784072853401 0.0543243059012832 0.119 -0.302 7.31044050870163 16.864138653726 0.119 -0.302 0.185761602591301 0.0205866715026462 1.51525219926471 -3.23348411705732 Q9H4A3 WNK1 Q9H4A3.7.S599.p_WNK1 Q9H4A3-7_S599s _1_1_599_599 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8708.9026.3 13.76 13.76 1.124 4 1 1 0 677.0178 1949.0704 S599s TMT10 591 (K) QQVEQSSAsQTGIK (Q) QQVEQS(0.0)S(0.0)AS(0.99)QT(0.0)GIK K:TMT10,s:Phosphorylated S WNK1 301202.7 1 9 162.1 495.27 HUMAN 1 7.3104 -16.8641 QVESKRKSGGNEVSI-p Q15061;S431-p QVESKRKSGGNEVSI 0.930700890442808 0.00238856624082869 0.0186666666666666 -0.887666666666667 0.619450895621725 40.2710955369403 0.0186666666666667 -0.887666666666667 0.86707149784138 9.39486288957213e-05 0.175494300749321 -10.2539744245121 Q15061 WDR43 Q15061.S431.p_WDR43 Q15061_S431s _1_1_431_431 Q15061 Q15061 WD repeat-containing protein 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5341.5341.4 9.56 9.56 4.743 2 1 1 0 500.5157 1919.0711 S431s TMT10 429 (K) RKsGGNEVSIEER (L) RKS(0.99)GGNEVS(0.0)IEER K:TMT10,s:Phosphorylated S WDR43 75859.2 3 5 2318.1 87.99 HUMAN 1 0.6195 -40.2711 QVFGVLESPELSRAS-p J3KQR7;S598-p QVFGVLESPELSRAS 0.40429383880151 0.41229414026037 0.130666666666667 -0.0953333333333333 7.26389684196176 5.1187558650688 0.130666666666667 -0.0953333333333333 0.187763129779613 0.307697815859554 1.50713247383252 -1.1255447643063 J3KQR7 NotFound J3KQR7.S598.p_NotFound J3KQR7_S598s _1_1_598_598 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30375.30375.3 22.17 22.17 3.556 2 1 1 0 829.4431 2406.3467 S598s TMT10 587 (R) KMIDQVFGVLEsPELSR (A) KMIDQVFGVLES(0.99)PELS(0.0)R K:TMT10,s:Phosphorylated S CEP170B 172326.6 13 11 51.1 746.11 HUMAN 1 7.2639 -5.1188 QVHSRSGSFDSRDRL-p Q5T200;S1292-p QVHSRSGSFDSRDRL 0.550883290708892 0.129738139499609 -0.092 0.161666666666667 4.77888385882002 11.6892050292057 -0.092 0.161666666666667 0.332745058120223 0.0677765560422234 -1.06337712383166 2.27622514898116 Q5T200 ZC3H13 Q5T200.S1292.p_ZC3H13 Q5T200_S1292s _1_1_1292_1292 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5463.5463.4 14.48 8.15 2.068 3 1 1 0 466.2242 1781.9092 S1292s TMT10 1290 (R) SGsFDSRDRLQER (D) S(0.0)GS(0.99)FDS(0.0)RDRLQER s:Phosphorylated S ZC3H13 197316.7 5 27 24.1 987.82 HUMAN 1 -4.7789 11.6892 QVIIISDSDDDDDER-p Q7Z333-4;S1019-p QVIIISDSDDDDDER 0.529169204923981 0.240089486190455 0.0833333333333333 0.115333333333333 5.11501828997233 8.16438203466906 0.0833333333333333 0.115986578300496 0.307962737186534 0.152602552024089 1.12509463419947 1.66312644732242 Q7Z333 SETX Q7Z333.4.S1019.p_SETX Q7Z333-4_S1017sS1019s_2_2_1017_1019 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27550.28177.3 17.11 17.11 17.107 3 2 2 0 1031.8268 2933.5355 S1017s S1019s TMT10 1011 (R) GQVIIIsDsDDDDDERILSLEK (L) GQVIIIS(0.99)DS(0.99)DDDDDERILS(0.0)LEK K:TMT10,s:Phosphorylated S SETX 310728.6 11 21 192.1 463.82 HUMAN 1 5.115 8.1644 QVILAKASQEHHLSE-p P38398;S1280-p QVILAKASQEHHLSE 0.512436496519705 0.00219928027114295 0.0926666666666667 -0.797666666666667 5.3663186040246 41.2927394144991 0.0926666666666667 -0.797666666666667 0.290648535896867 7.42550608898708e-05 1.17078438469929 -10.7283802086015 P38398 BRCA1 P38398.S1280.p_BRCA1 P38398_S1280s _1_1_1280_1280 P38398 P38398-7|P38398-4|P38398-8|Q5YLB2 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15269.15269.4 15.67 15.67 4.364 5 1 1 0 930.7203 3639.9004 S1280s TMT10 1265 (K) NSLNDCSNQVILAKAsQEHHLSEETK (C) NS(0.0)LNDCS(0.0)NQVILAKAS(0.99)QEHHLS(0.0)EET(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRCA1 210227.6 2 14 106.1 588.91 HUMAN 1 5.3663 -41.2927 QVISDRQTPKKDESL-p Q8NFH5;T308-p QVISDRQTPKKDESL 0.483726315617236 0.0110512162888973 -0.12 -0.567 5.81016897199798 27.4006933570134 -0.12 -0.567 0.262411644426901 0.00181941036409662 -1.25067195285257 -5.67066136759804 Q8NFH5 NUP35 Q8NFH5.T308.p_NUP35 Q8NFH5_T308t _1_1_308_308 Q8NFH5 Q8NFH5|Q8NFH5-2|Q8NFH5-3 Nucleoporin NUP53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14257.14257.4 15.98 11.83 3.133 8 1 1 0 920.5015 3599.0098 T308t TMT10 295 (K) ASTSDYQVISDRQtPKKDESLVSK (A) AS(0.0)T(0.0)S(0.0)DY(0.0)QVIS(0.0)DRQT(0.99)PKKDES(0.0)LVS(0.0)K K:TMT10,t:Phosphorylated T NUP35 34887.3 6 15 627.1 257.69 HUMAN 1 -5.8102 -27.4007 QVKATNESEDEIPQL-p O76021;S361-p QVKATNESEDEIPQL 0.674125181368517 0.0395666397756338 0.0606666666666667 -0.256333333333333 3.21013266037472 18.8091410718554 0.0606666666666667 -0.256333333333333 0.477514687185264 0.0131548497718398 0.762778809068569 -3.62477444529199 O76021 RSL1D1 O76021.S361.p_RSL1D1 O76021_S361s _1_1_361_361 O76021 O76021|O76021-2 Ribosomal L1 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23408.23408.2 20.22 20.22 3.213 2 1 1 0 1368.2457 2655.5172 S361s TMT10 357 (K) ATNEsEDEIPQLVPIGKK (T) AT(0.0)NES(0.99)EDEIPQLVPIGKK K:TMT10,s:Phosphorylated S RSL1D1 55199.7 38 3 643.1 254.92 HUMAN 1 3.2101 -18.8091 QVKEAEDSDSDDNIK-p Q96ST2;S511-p QVKEAEDSDSDDNIK 0.37550402812562 0.023509919426035 -0.307666666666667 0.492 7.86573824407807 22.2145767262065 -0.307666666666667 0.492 0.16346552573993 0.0060054053617297 -1.6118608499033 4.36649515288359 Q96ST2 IWS1 Q96ST2.S511.p_IWS1 Q96ST2_S511sS513s_2_2_511_513 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10484.10484.2 11.3 11.3 99 2 2 2 0 978.3974 1795.8598 S511s S513s TMT10 507 (K) EAEDsDsDDNIK (R) EAEDS(1.0)DS(1.0)DDNIK K:TMT10,s:Phosphorylated S IWS1 92010 6 19 230.1 422.87 HUMAN 1 -7.8657 22.2146 QVKIERDSREHEEPT-p P24593;S116-p QVKIERDSREHEEPT 0.750479894325358 0.0131669402366447 -0.084 0.409333333333333 2.37387975699603 26.1898421416083 -0.084 0.409333333333333 0.578911296646284 0.00240445019594644 -0.590095920386879 5.34448969313846 P24593 IGFBP5 P24593.S116.p_IGFBP5 P24593_S116s _1_1_116_116 P24593 P24593 Insulin-like growth factor-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10938.10938.5 13.74 11.04 1.197 7 1 1 0 678.718 3309.5945 S116s TMT10 112 (K) IERDsREHEEPTTSEMAEETYSPK (I) IERDS(0.99)REHEEPT(0.0)T(0.0)S(0.0)EMAEET(0.0)Y(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S IGFBP5 31596.7 2 1 2059.1 100.08 HUMAN 1 -2.3739 26.1898 QVKIWRRSYDVPPPP-p P18669;S118-p QVKIWRRSYDVPPPP 0.90552186362789 0.0891728485690818 0.0183333333333333 -0.199 0.847522018601694 13.8926832612394 0.0183333333333333 -0.199 0.822711935987335 0.0408067186676775 0.235181103738882 -2.67164824245542 P18669 PGAM1 P18669.S118.p_PGAM1 P18669_S118s _1_1_118_118 P18669 P18669|Q8N0Y7 Phosphoglycerate mutase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21219.21865.3 26.81 26.81 1.115 5 1 1 0 909.42 2646.2748 S118s Hydrogen 118 (R) sYDVPPPPMEPDHPFYSNISK (D) S(0.99)Y(0.0)DVPPPPMEPDHPFY(0.0)S(0.0)NIS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S PGAM1 28917.5 38 5 1193.1 167.89 HUMAN 1 0.8475 -13.8927 QVKLQFGSQPQVYND-p Q96ST3;S139-p QVKLQFGSQPQVYND 0.247048592039774 0.494232935426848 -0.286333333333333 0.0766666666666667 11.6053066853137 4.09194799921837 -0.286333333333333 0.0766666666666667 0.069098613238122 0.389767119994123 -2.26251621081706 0.934504265405048 Q96ST3 SIN3A Q96ST3.S139.p_SIN3A Q96ST3_S139s _1_1_139_139 Q96ST3 Q96ST3 Paired amphipathic helix protein Sin3a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36748.36748.3 20.14 20.14 2.934 2 1 1 0 894.4537 2601.3787 S139s TMT10 135 (K) LQFGsQPQVYNDFLDIMK (E) LQFGS(0.99)QPQVY(0.0)NDFLDIMK K:TMT10,s:Phosphorylated S SIN3A 145971.2 1 3 501.1 291.36 HUMAN 1 -11.6053 4.0919 QVKPLGKSPQVKPAS-p E7ETY2;S503-p QVKPLGKSPQVKPAS 0.195369518145262 0.0142580161297992 -0.527666666666667 -0.408 13.8284720022861 25.5964143220358 -0.527666666666667 -0.408 0.0414145359805303 0.00275650362406292 -2.6614793593792 -5.18975373736236 E7ETY2 TCOF1 E7ETY2.S503.p_TCOF1 E7ETY2_S503s _1_1_503_503 E7ETY2 Q13428-4|Q13428-3|E7ETY2 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20593.20593.4 15.77 15.77 1.303 3 1 1 0 770.1918 2997.7763 S503s TMT10 499 (K) PLGKsPQVKPASTMGMGPLGK (G) PLGKS(0.99)PQVKPAS(0.0)T(0.0)MGMGPLGK K:TMT10,s:Phosphorylated S TCOF1 152529.5 4 13 19.1 1034.65 HUMAN 1 -13.8285 -25.5964 QVKSLAESIDDALNC-p A0A087WWK8;S239-p QVKSLAESIDDALNC 0.404577762556746 0.0549075865221613 0.143 -0.244 7.25710140604868 16.7989521356942 0.143 -0.244 0.18805715402339 0.020898002963613 1.50594664546445 -3.22072293326751 A0A087WWK8 IQSEC1 A0A087WWK8.S239.p_IQSEC1 A0A087WWK8_S239s _1_1_239_239 A0A087WWK8 A0A087WWK8|Q6DN90|Q6DN90-2|A0A0C4DGT3 IQ motif and SEC7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20826.20826.3 13.79 13.79 6.796 2 1 1 0 591.6086 1692.8424 S239s TMT10 235 (K) SLAEsIDDALNCR (S) S(0.0)LAES(0.99)IDDALNCR C:Carbamidomethylation,s:Phosphorylated S IQSEC1 125330.2 2 5 768.1 228.42 HUMAN 1 7.2571 -16.799 QVLARRKSRDFHSKL-p P28347;S102-p QVLARRKSRDFHSKL 0.165061979567431 0.00278494099914611 0.307 0.911333333333333 15.6643583639931 38.6736280355771 0.307 0.911333333333333 0.0271371455255875 0.000135717920429485 3.00400563762129 9.55049060959809 P28347 TEAD1 P28347.S102.p_TEAD1 P28347_S102s _1_1_102_102 P28347 P28347|H0YE88|H0YEJ9|P28347-2 Transcriptional enhancer factor TEF-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3975.3975.3 7.91 7.91 7.914 2 1 1 0 472.2465 1334.7581 S102s TMT10 102 (K) sRDFHSK (L) S(0.99)RDFHS(0.0)K K:TMT10,s:Phosphorylated S TEAD1 48344.1 1 3 3010.2 63.35 HUMAN 1 15.6644 38.6736 QVLGIRLT_______-p Q92925;T531-p QVLGIRLT_______ 0.56732930889055 0.155409976728646 0.0783333333333333 -0.239666666666667 4.53452996964405 10.6336204594098 0.0783333333333334 -0.239666666666667 0.352003517272088 0.0864247146022262 1.01802269742221 -2.09113303612087 Q92925 SMARCD2 Q92925.T531.p_SMARCD2 Q92925_T531t _1_1_531_531 Q92925 Q92925|Q92925-2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26291.26291.3 15.5 15.5 99 1 1 1 0 622.0135 1784.0591 T531t TMT10 519 (R) RQELEQVLGIRLt (-) RQELEQVLGIRLT(1.0) t:Phosphorylated T SMARCD2 59148.1 1 5 1828.1 112.46 HUMAN 1 4.5345 -10.6336 QVLKHNGSSEILNKL-p Q8TDM6;S295-p QVLKHNGSSEILNKL 0.701695632500774 0.31149165895602 0.0533333333333333 0.137 2.89153150635552 6.69410697663935 0.0533333333333333 0.137 0.513862409969254 0.214086509952918 0.698293681944966 1.40698284839053 Q8TDM6 DLG5 Q8TDM6.S295.p_DLG5 Q8TDM6_S295s_1_1_295_295 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10416.10416.2 10.42 10.42 1.104 2 1 1 0 819.4218 1556.8797 N293n S295s TMT10 292 (K) HnGsSEILNK (L) HN(0.99)GS(0.99)S(0.0)EILN(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S DLG5 215575.4 9 4 34.1 890.58 HUMAN 1 2.8915 6.6941 QVLQSTQSPRTKNAP-p Q9Y2D5-4;S979-p QVLQSTQSPRTKNAP 0.520421848674893 0.00227464949884667 -0.114333333333333 -0.952 5.24083504977233 40.8166077508366 -0.114333333333333 -0.952 0.299168934730511 8.28589117196686e-05 -1.14801488129904 -10.5048313508091 Q9Y2D5 AKAP2 Q9Y2D5.4.S979.p_AKAP2 Q9Y2D5-4_S979s _1_1_979_979 Q9Y2D5-4 Q9Y2D5-4|Q9Y2D5-6|Q9Y2D5-7|Q9Y2D5-5 Isoform 3 of A-kinase anchor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7441.7441.2 14.16 9.23 2.159 3 1 1 0 726.8734 1372.7746 S979s TMT10 972 (R) QVLQSTQsPR (T) QVLQS(0.0)T(0.0)QS(0.99)PR s:Phosphorylated S AKAP2 122582.3 2 15 779.1 226.39 HUMAN 1 -5.2408 -40.8166 QVMALKDTIGKLKTE-p Q5BJF6-4;T226-p QVMALKDTIGKLKTE 0.224262912799076 0.00572570550021105 -0.244666666666667 -0.629 12.4738731663094 32.4588793542639 -0.244666666666667 -0.629 0.0565734525250924 0.00056769107250264 -2.41667965613887 -7.20389047915424 Q5BJF6 ODF2 Q5BJF6.4.T226.p_ODF2 Q5BJF6-4_T226t _1_1_226_226 Q5BJF6-4 Q5BJF6|Q5BJF6-4|Q5BJF6-3|Q5BJF6-2|Q5BJF6-7|Q5BJF6-6 Isoform 4 of Outer dense fiber protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17648.17648.3 12.59 12.59 99 1 1 1 0 657.7166 1891.1654 T226t TMT10 219 (K) QVMALKDtIGK (L) QVMALKDT(1.0)IGK K:TMT10,t:Phosphorylated T ODF2 96031.2 1 6 853.1 211.96 HUMAN 1 -12.4739 -32.4589 QVNGAPGSPTEPAGQ-p Q9BQG0-2;S1267-p QVNGAPGSPTEPAGQ 0.691992312130027 0.165047921250331 0.0533333333333333 -0.139333333333333 2.99826838320529 10.2882100362333 0.0533333333333333 -0.139333333333333 0.501387106595363 0.0935791285161477 0.720060565887661 -2.03098175849857 Q9BQG0 MYBBP1A Q9BQG0.2.S1267.p_MYBBP1A Q9BQG0-2_S1267s_1_1_1267_1267 Q9BQG0-2 Q9BQG0-2 Isoform 2 of Myb-binding protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9376.9376.3 24.85 14.16 2.399 3 1 1 0 954.1656 2779.5306 N1262n S1267s TMT10 1255 (K) NQKPSQVnGAPGsPTEPAGQK (Q) N(0.0)QKPS(0.0)QVN(0.99)GAPGS(0.99)PT(0.0)EPAGQK K:TMT10,n:Deamidated,s:Phosphorylated S MYBBP1A 150334.3 46 9 297.1 378.74 HUMAN 1 2.9983 -10.2882 QVNLNNASRSQSSHS-p O60716-3;S857-p QVNLNNASRSQSSHS 0.771638354290043 0.0891790040918481 -0.0406666666666667 0.186333333333333 2.15854972928905 13.891593640207 -0.0406666666666667 0.186333333333333 0.608338114072798 0.0408169581340108 -0.543634600806186 2.67144888474846 O60716 CTNND1 O60716.3.S857.p_CTNND1 O60716-3_S857s _1_1_857_857 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-24|O60716-25|O60716-26|O60716-28|O60716-30 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14873.14873.3 12.11 12.11 12.109 2 1 1 0 558.5997 1593.8182 S857s TMT10 847 (K) SDFQVNLNNAsR (S) S(0.0)DFQVNLNNAS(0.99)R s:Phosphorylated S CTNND1 105545.3 2 31 21.1 1014.17 HUMAN 1 -2.1585 13.8916 QVNSESDSDSEESKK-p P46100;S1326-p QVNSESDSDSEESKK 0.335011871726365 0.961050637830868 -0.161 0.00566666666666669 8.85987741273936 0.247279199734572 -0.161 0.00566666666666668 0.130020627812575 0.944652503846488 -1.78410724622239 0.072698545826413 P46100 ATRX P46100.S1326.p_ATRX P46100_S1322sS1324sS1326s_3_3_1322_1326 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7994.7994.4 7.16 7.16 7.159 5 3 3 0 741.5819 2723.4051 S1322s S1324s S1326s TMT10 1318 (K) NQVNsEsDsDSEESKKPR (Y) NQVNS(0.99)ES(0.99)DS(0.99)DS(0.0)EES(0.0)KKPR K:TMT10,s:Phosphorylated S ATRX 285034.2 2 65 18.1 1035.36 HUMAN 1 -8.8599 0.2473 QVNVRMDSFDEDLAR-p Q9Y2W1;S575-p QVNVRMDSFDEDLAR 0.291864377986462 0.021068905418286 -0.148333333333333 0.320666666666667 10.0884049859368 22.9254400482886 -0.148333333333333 0.320666666666667 0.0979849784414043 0.0050986593286168 -1.99707370438416 4.53176932282604 Q9Y2W1 THRAP3 Q9Y2W1.S575.p_THRAP3 Q9Y2W1_S575s _1_1_575_575 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23950.23950.3 17.36 17.36 5.985 2 1 1 0 820.3879 2379.1812 S575s TMT10 573 (R) MDsFDEDLARPSGLLAQER (K) MDS(0.99)FDEDLARPS(0.0)GLLAQER s:Phosphorylated S THRAP3 108720.9 9 76 10.2 1293.04 HUMAN 1 -10.0884 22.9254 QVNYNDGSQEDRDWQ-p F5GWX5;S1342-p QVNYNDGSQEDRDWQ 0.235621777934373 0.183857002051046 0.27 0.375666666666667 12.0232665940023 9.6719044292038 0.27 0.375666666666667 0.0627586135385287 0.107847369591306 2.33646209608819 1.92401164246672 F5GWX5 CHD4 F5GWX5.S1342.p_CHD4 F5GWX5_S1342s _1_1_1342_1342 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6186.6186.2 13.76 11.19 5.43 2 1 1 0 867.3694 1653.7666 S1342s TMT10 1335 (K) QVNYNDGsQEDR (D) QVNY(0.0)NDGS(0.99)QEDR s:Phosphorylated S CHD4 218583 2 16 49.1 753.68 HUMAN 1 12.0233 9.6719 QVPGEWPSPEELGAR-p Q5PRF9;S252-p QVPGEWPSPEELGAR 0.161194879896436 0.113229582632421 0.232666666666667 -0.303 15.8763966330875 12.4773213109454 0.232666666666667 -0.303 0.0258440359620909 0.0565285530306781 3.04449295182894 -2.4160332768911 Q5PRF9 SAMD4B Q5PRF9.S252.p_SAMD4B Q5PRF9_S252s _1_1_252_252 Q5PRF9 Q5PRF9|M0QZ22|A0A087WZT0 Protein Smaug homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.31110.31110.4 22.4 22.4 2.735 5 1 1 0 719.3513 2794.4283 S252s TMT10 236 (R) SMSLIPTSPQVPGEWPsPEELGAR (A) S(0.0)MS(0.0)LIPT(0.0)S(0.0)PQVPGEWPS(0.99)PEELGAR s:Phosphorylated S SAMD4B 75938.6 3 3 1599.1 128.75 HUMAN 1 15.8764 -12.4773 QVPGGRETPQGELRP-p Q7L8J4;T13-p QVPGGRETPQGELRP 0.06600969777365 0.0476581928525677 0.512 -0.289666666666667 25.4280632521822 17.6810598667549 0.512 -0.289666666666667 0.00286545554255379 0.0170566608176082 5.1530154425303 -3.39528540294942 Q7L8J4 SH3BP5L Q7L8J4.T13.p_SH3BP5L Q7L8J4_T13t _1_1_13_13 Q7L8J4 Q7L8J4 SH3 domain-binding protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16308.16308.5 10.89 8.2 10.891 6 1 1 0 965.8817 4745.4019 T13t TMT10 6 (R) QVPGGREtPQGELRPEVVEDEVPRSPVAEEPGGGGSSSSEAK (L) QVPGGRET(0.99)PQGELRPEVVEDEVPRS(0.0)PVAEEPGGGGS(0.0)S(0.0)S(0.0)S(0.0)EAK K:TMT10,t:Phosphorylated T SH3BP5L 43726.7 1 1 1783.1 115.12 HUMAN 1 25.4281 -17.6811 QVPLHGGSPQVTVTG-p Q9HAP2;S669-p QVPLHGGSPQVTVTG 0.819226860557372 0.0382689690253923 -0.0403333333333334 -0.253 1.66858070419748 19.0384993421972 -0.0403333333333334 -0.253 0.680991873837808 0.0124781460865599 -0.43408830906515 -3.67234526999583 Q9HAP2 MLXIP Q9HAP2.S669.p_MLXIP Q9HAP2_S669s _1_1_669_669 Q9HAP2 Q9HAP2 MLX-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22491.22491.4 8.16 8.16 4.16 6 1 1 0 949.7483 3716.0172 S669s TMT10 648 (R) LFPSTAQDPLGKGEQVPLHGGsPQVTVTGPSR (D) LFPS(0.0)T(0.0)AQDPLGKGEQVPLHGGS(0.99)PQVT(0.0)VT(0.0)GPS(0.0)R K:TMT10,s:Phosphorylated S MLXIP 101925.3 1 2 3960.1 40.22 HUMAN 1 -1.6686 -19.0385 QVPMVAGSPLGATQT-p Q8N9N5;S100-p QVPMVAGSPLGATQT 0.408838439850386 0.108973317315715 0.134333333333333 0.179 7.16721637798164 12.7193855802514 0.134333333333333 0.179 0.191989891069463 0.0534639992440368 1.4902529836465 2.45930787882542 Q8N9N5 BANP Q8N9N5.S100.p_BANP Q8N9N5_S100s _1_1_100_100 Q8N9N5 Q8N9N5|Q8N9N5-7|Q8N9N5-5|Q8N9N5-4|Q8N9N5-2|Q8N9N5-6|Q8N9N5-3|E9PJI6 Protein BANP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21085.21085.3 23.04 19.81 3.386 4 1 1 0 987.1705 2879.5272 S100s TMT10 88 (K) QHSPIQVPMVAGsPLGATQTCNK (V) Q(0.0)HS(0.0)PIQVPM(0.0)VAGS(0.99)PLGAT(0.0)QT(0.0)CN(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BANP 57178.1 4 3 3183.1 58.32 HUMAN 1 7.1672 12.7194 QVPPPLLSPQVPVSL-p Q8NDV7;S1372-p QVPPPLLSPQVPVSL 0.454779686832747 0.401621218069787 0.106666666666667 -0.111 6.31251574059601 5.26962866481391 0.106666666666667 -0.111 0.2337482811151 0.297192012921839 1.34005045496018 -1.15300353075028 Q8NDV7 TNRC6A Q8NDV7.S1372.p_TNRC6A Q8NDV7_S1372s _1_1_1372_1372 Q8NDV7 Q8NDV7|Q8NDV7-5|Q8NDV7-6|Q8NDV7-2|Q8NDV7-3 Trinucleotide repeat-containing gene 6A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.34109.34109.3 10.38 10.38 3.374 2 1 1 0 807.812 2341.4623 S1372s TMT10 1364 (R) AQVPPPLLsPQVPVSLLK (Y) AQVPPPLLS(0.99)PQVPVS(0.0)LLK K:TMT10,s:Phosphorylated S TNRC6A 211092.3 2 12 181.1 478.43 HUMAN 1 6.3125 -5.2696 QVQEGFGSLRRCYAR-p A6NKF1;S210-p QVQEGFGSLRRCYAR 0.451712086772319 0.895355793239036 0.139333333333333 -0.0133333333333333 6.37225243538297 0.673522291221137 0.139333333333333 -0.0133333333333333 0.230555112198288 0.856343037172564 1.35061697204013 -0.189835017707968 A6NKF1 NotFound A6NKF1.S210.p_NotFound A6NKF1_S210s _1_1_210_210 A6NKF1 A6NKF1|F8WC89|A6NKF1-2 SAC3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23961.23961.3 7.32 7.32 99 1 1 1 0 849.7824 2467.3619 S210s TMT10 193 (R) GPADPVLLQAQVQEGFGsLRR (C) GPADPVLLQAQVQEGFGS(1.0)LRR s:Phosphorylated S SAC3D1 44179.9 1 2 4138.1 36.83 HUMAN 1 6.3723 -0.6735 QVRDAGLSFKDDMPK-p Q9NW64;S102-p QVRDAGLSFKDDMPK 0.221440669353428 0.0257729799287224 -0.427666666666667 -0.444 12.6006772044851 21.6065876818154 -0.427666666666667 -0.444 0.0549455189478399 0.00690782348928791 -2.43935387533049 -4.22817266253176 Q9NW64 RBM22 Q9NW64.S102.p_RBM22 Q9NW64_S102s _1_1_102_102 Q9NW64 Q9NW64|Q9NW64-2 Pre-mRNA-splicing factor RBM22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19456.19456.3 13.13 13.13 99 1 1 1 0 697.6994 2011.1137 S102s TMT10 98 (R) DAGLsFKDDMPK (S) DAGLS(1.0)FKDDMPK K:TMT10,s:Phosphorylated S RBM22 47636.5 1 1 4091.1 37.81 HUMAN 1 -12.6007 -21.6066 QVRVGGSSVDLHRFH-p O60716-3;S269-p QVRVGGSSVDLHRFH 0.372156248757713 0.562007402958364 0.201333333333333 -0.0566666666666666 7.96300745099924 3.37123069177018 0.201333333333333 -0.0566666666666667 0.15984507322225 0.460126165816301 1.62874271547257 -0.794735799188747 O60716 CTNND1 O60716.3.S269.p_CTNND1 O60716-3_S268sS269s_2_2_268_269 O60716-3 O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-24 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9006.9006.3 8.21 8.21 99 2 2 2 0 472.5478 1255.6956 S268s S269s TMT10 265 (R) VGGssVDLHR (F) VGGS(1.0)S(1.0)VDLHR s:Phosphorylated S CTNND1 105545.3 5 45 21.1 1014.17 HUMAN 1 7.963 -3.3712 QVSCELVSPKLNRAT-p Q06265;S65-p QVSCELVSPKLNRAT 0.980593512823283 0.828428337008755 -0.00433333333333333 -0.027 0.169826671500053 1.14253795868489 -0.00433333333333335 -0.027 0.961650657443671 0.768681102082783 -0.0503488804191513 -0.309229003079753 Q06265 EXOSC9 Q06265.S65.p_EXOSC9 Q06265_S65s _1_1_65_65 Q06265 Q06265-2|D6RIY6|D6RA17 Exosome complex component RRP45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23137.23137.3 18.29 16.94 5.189 2 1 1 0 652.0217 1874.0821 S65s TMT10 55 (R) VLGQVSCELVsPK (L) VLGQVS(0.0)CELVS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EXOSC9 49575.8 1 1 2666.1 74.5 HUMAN 1 -0.1698 -1.1425 QVSERPRSLPLSPEL-p Q6DT37;S1540-p QVSERPRSLPLSPEL 0.47451765078145 0.063344122419986 0.0973333333333333 -0.21 5.96372990183793 15.9547038806273 0.0973333333333333 -0.21 0.253295229117399 0.025382220462093 1.27809965619444 -3.0573450458949 Q6DT37 CDC42BPG Q6DT37.S1540.p_CDC42BPG Q6DT37_S1540s _1_1_1540_1540 Q6DT37 Q6DT37 Serine/threonine-protein kinase MRCK gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27104.27104.2 13.95 9.14 4.243 4 1 1 0 782.8899 1484.8046 S1540s TMT10 1540 (R) sLPLSPELESSP (-) S(0.99)LPLS(0.0)PELES(0.0)S(0.0)P s:Phosphorylated S CDC42BPG 173882.5 2 10 997.1 190.4 HUMAN 1 5.9637 -15.9547 QVSESEDSITKQIES-p O95239;S815-p QVSESEDSITKQIES 0.577747259618676 0.927601724721068 0.0916666666666667 0.00933333333333338 4.38438770509936 0.460153758765634 0.0916666666666667 0.00933333333333339 0.364385619758666 0.899465736043778 0.989928790763302 0.132369433593123 O95239 KIF4A O95239.S815.p_KIF4A O95239_S815s _1_1_815_815 O95239 O95239|O95239-2 Chromosome-associated kinesin KIF4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.32415.32415.4 23.1 23.1 1.909 6 1 1 0 828.4021 3230.6139 S815s TMT10 807 (R) GQVSESEDsITKQIESLETEMEFR (S) GQVS(0.0)ES(0.0)EDS(0.99)IT(0.0)KQIES(0.0)LET(0.0)EMEFR K:TMT10,s:Phosphorylated S KIF4A 141476.1 3 5 516.1 285.41 HUMAN 1 4.3844 0.4602 QVSSLCGTDNEDKIT-p Q9UBW7;T1270-p QVSSLCGTDNEDKIT 0.737592217891487 0.765849994464979 0.049 -0.033 2.50569966102981 1.60072213450692 0.049 -0.033 0.561603795064016 0.691715944478482 0.618093072648463 -0.418398699392582 Q9UBW7 ZMYM2 Q9UBW7.T1270.p_ZMYM2 Q9UBW7_T1270t _1_1_1270_1270 Q9UBW7 Q9UBW7 Zinc finger MYM-type protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17223.17223.4 17.66 17.66 4.534 6 1 1 0 721.6177 2803.4751 T1270t TMT10 1262 (R) YQVSSLCGtDNEDKITTGK (R) Y(0.0)QVS(0.0)S(0.0)LCGT(0.99)DNEDKIT(0.0)T(0.0)GK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ZMYM2 158502.5 1 9 750.1 232.41 HUMAN 1 2.5057 -1.6007 QVSSRPTSPEKFSVP-p J3KNL6;S1441-p QVSSRPTSPEKFSVP 0.363416371902755 0.172710625447678 -0.143 0.174 8.16193070690956 10.0262586387526 -0.143 0.174 0.152688711181014 0.0993971966921611 -1.66324014267201 1.98546757492877 J3KNL6 SEC16A J3KNL6.S1441.p_SEC16A J3KNL6_S1441s _1_1_1441_1441 J3KNL6 J3KNL6|F1T0I1|O15027-5 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11793.11793.3 16.05 15.05 1.466 3 1 1 0 674.3334 1941.0214 S1441s Hydrogen 1439 (R) PTsPEKFSVPHVCAR (F) PT(0.0)S(0.99)PEKFS(0.0)VPHVCAR K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S SEC16A 253486.5 35 34 15.1 1143.82 HUMAN 1 -8.1619 10.0263 QVSTLPQSPAALSSS-p C9J6P4;S572-p QVSTLPQSPAALSSS 0.665261908909664 0.171341111321948 0.0853333333333333 -0.151333333333333 3.31009755230922 10.0734134640091 0.0853333333333333 -0.151333333333333 0.466648898212677 0.098323799742742 0.782722586335634 -1.99365493449595 C9J6P4 ZC3HAV1 C9J6P4.S572.p_ZC3HAV1 C9J6P4_S572s _1_1_572_572 C9J6P4 C9J6P4|Q7Z2W4-3 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22089.22089.4 21.2 21.2 1.866 10 1 1 0 847.6808 3307.7331 S572s TMT10 551 (R) NLVPTTPGESTAPAQVSTLPQsPAALSSSNR (A) NLVPT(0.0)T(0.0)PGES(0.0)T(0.0)APAQVS(0.0)T(0.0)LPQS(0.99)PAALS(0.0)S(0.0)S(0.0)NR s:Phosphorylated S ZC3HAV1 115909.2 2 15 361.1 343.37 HUMAN 1 3.3101 -10.0734 QVTPDGESDEVGVIP-p Q12959-2;S635-p QVTPDGESDEVGVIP 0.0948633510902073 0.7270426018009 0.446 -0.0406666666666667 21.7176361051372 1.90510876442535 0.446 -0.0406666666666667 0.00673343061836239 0.64489516895353 4.25765684500113 -0.487627976176011 Q12959 DLG1 Q12959.2.S635.p_DLG1 Q12959-2_S635s _1_1_635_635 Q12959-2 Q12959-2|Q12959-7|Q12959-4|A0A0C4DFT3|Q12959-6|Q12959-3|Q12959-5|Q12959-9|Q12959-8 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18734.18734.3 16.27 12.97 5.11 3 1 1 0 765.7216 2215.1858 S635s TMT10 628 (R) QVTPDGEsDEVGVIPSK (R) QVT(0.0)PDGES(0.99)DEVGVIPS(0.0)K K:TMT10,s:Phosphorylated S DLG1 103604.4 2 21 196.1 460.79 HUMAN 1 21.7176 -1.9051 QVTRGTVTPPPRLVK-p P00519-2;T800-p QVTRGTVTPPPRLVK 0.544463415002689 0.626333875251668 0.083 0.076 4.87674711867068 2.76433758359975 0.083 0.076 0.32533088015418 0.529134698389815 1.08142221959474 0.672036046264314 P00519 ABL1 P00519.2.T800.p_ABL1 P00519-2_T800t _1_1_800_800 P00519-2 P00519-2 Isoform IB of Tyrosine-protein kinase ABL1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6048.6309.2 10.75 10.75 2.719 2 1 1 0 567.3 1053.6254 T800t TMT10 797 (R) GTVtPPPR (L) GT(0.0)VT(0.99)PPPR t:Phosphorylated T ABL1 125637.1 2 11 347.1 352.28 HUMAN 1 4.8767 2.7643 QVTTLVNTNSKGPSN-p P35221;T42-p QVTTLVNTNSKGPSN 0.239534969870277 0.34669539887872 -0.204666666666667 -0.112 11.8637481393874 6.09802547688204 -0.204666666666667 -0.112 0.0651066254657394 0.245582520467547 -2.30819039786772 -1.30169281986208 P35221 CTNNA1 P35221.T42.p_CTNNA1 P35221_T42t _1_1_42_42 P35221 P35221|G3XAM7|P35221-2 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32419.32419.4 17.55 17.55 1.194 6 1 1 0 805.9583 3140.8498 T42t TMT10 28 (R) LLEPLVTQVTTLVNtNSKGPSNK (K) LLEPLVT(0.0)QVT(0.0)T(0.0)LVNT(0.99)NS(0.0)KGPS(0.0)NK K:TMT10,t:Phosphorylated T CTNNA1 100754.2 9 2 169.1 491.55 HUMAN 1 -11.8637 -6.098 QVVGRAGTGVDNVDL-p A0A2C9F2M7;T78-p QVVGRAGTGVDNVDL 0.848604997500027 0.0827653760401808 0.0286666666666667 0.221666666666667 1.37774608047529 14.329353627912 0.0286666666666667 0.221666666666667 0.728157608748671 0.0369032518579424 0.366120638421429 2.75189336261384 A0A2C9F2M7 NotFound A0A2C9F2M7.T78.p_NotFound A0A2C9F2M7_T78t _1_1_78_78 A0A2C9F2M7 A0A2C9F2M7|A0A286YF22|A0A286YFA2|A0A286YFL2|A0A286YFB2|A0A286YFC8 D-3-phosphoglycerate dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14690.14690.3 13.76 13.76 13.76 2 1 1 0 719.0449 2075.1497 T78t TMT10 76 (R) AGtGVDNVDLEAATRK (G) AGT(0.99)GVDNVDLEAAT(0.0)RK K:TMT10,t:Phosphorylated T PHGDH 56909.6 2 4 1205.1 166.89 HUMAN 1 1.3777 14.3294 QVVKTGGTPKVPDCF-p O95071;T724-p QVVKTGGTPKVPDCF 0.43276554026149 0.00158854031560366 0.112666666666667 -0.876 6.69995680529547 44.9849621876675 0.112666666666667 -0.876 0.213798335366833 3.1732462919379e-05 1.40838310601086 -12.6179763752388 O95071 UBR5 O95071.T724.p_UBR5 O95071_T724t _1_1_724_724 O95071 O95071 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11585.11585.3 8.09 2.41 2.117 2 1 1 0 667.6788 1921.0366 T724t TMT10 721 (K) TGGtPKVPDCFQR (T) T(0.0)GGT(0.99)PKVPDCFQR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T UBR5 312542 1 10 80.1 636.57 HUMAN 1 6.7 -44.985 QVVPKINSLSLIRTA-p Q8IXS8;S442-p QVVPKINSLSLIRTA 0.835038369896577 0.169727189367742 -0.0516666666666667 -0.173 1.51095666452118 10.1290273142771 -0.0516666666666667 -0.173 0.706161983663787 0.0970727355895325 -0.397553307967559 -2.00331416851402 Q8IXS8 FAM126B Q8IXS8.S442.p_FAM126B Q8IXS8_S442s _1_1_442_442 Q8IXS8 Q8IXS8 Protein FAM126B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22849.22849.2 12.71 5 2.179 2 1 1 0 612.8494 1144.7251 S442s TMT10 440 (K) INsLSLIR (T) INS(0.99)LS(0.0)LIR s:Phosphorylated S FAM126B 59101.9 1 8 955.1 195.77 HUMAN 1 -1.511 -10.129 QWADGAISPNGHRPQ-p Q641Q2;S1075-p QWADGAISPNGHRPQ 0.277275932820916 0.171506962155233 -0.160333333333333 -0.146333333333333 10.5387581552008 10.0660632827847 -0.160333333333333 -0.146333333333333 0.0883332449099923 0.098490347945402 -2.07548671314215 -1.99237858408959 Q641Q2 FAM21A Q641Q2.S1075.p_FAM21A Q641Q2_S1075s_1_1_1075_1075 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2|Q9Y4E1-4|Q9Y4E1-2|E7ESD2|Q9Y4E1-6|Q9Y4E1-3|J3KP36|F8W7U3|A0A087WYF6|Q9Y4E1-5|Q5SRD0 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18526.19265.3 20.41 15.54 99 1 1 1 0 851.097 2470.3265 S1075s N1077n TMT10 1064 (R) GPIAQWADGAIsPnGHRPQLR (A) GPIAQWADGAIS(1.0)PN(1.0)GHRPQLR s:Phosphorylated S,n:Deamidated WASHC2A 147352.2 15 56 12.1 1178.3 HUMAN 1 -10.5388 -10.0661 QWRGMGLSLMRLDRF-p P49327;S509-p QWRGMGLSLMRLDRF 0.512060896825979 0.0730264477713378 0.116333333333333 -0.210333333333333 5.37416800524124 15.0950774366501 0.116333333333333 -0.210333333333333 0.290123694665612 0.0309380015111831 1.17220581514841 -2.89439870014478 P49327 FASN P49327.S509.p_FASN P49327_S509s _1_1_509_509 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21745.21745.2 7.1 7.1 99 1 1 1 0 587.2909 1093.6059 S509s TMT10 505 (R) GMGLsLMR (L) GMGLS(1.0)LMR s:Phosphorylated S FASN 276046.1 1 6 175.1 481.87 HUMAN 1 5.3742 -15.0951 QWYREHRSELNLRRL-p P06744-2;S61-p QWYREHRSELNLRRL 0.830631691171762 0.0312466807474374 0.105 0.462333333333333 1.55170910386714 20.3345181360704 0.105 0.462333333333333 0.69956663737169 0.00925866107294329 0.407065572356127 3.94733938391085 P06744 GPI P06744.2.S61.p_GPI P06744-2_S61s _1_1_61_61 P06744-2 P06744-2|K7EQ48 Isoform 2 of Glucose-6-phosphate isomerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4007.4007.4 11.02 6.97 99 1 1 1 0 405.4654 1538.8713 S61s TMT10 58 (R) EHRsELNLRR (L) EHRS(1.0)ELNLRR s:Phosphorylated S GPI 64608.7 1 1 2374.1 86.23 HUMAN 1 1.5517 20.3345 QYDAGAGSPEAEPTD-p O14976;S770-p QYDAGAGSPEAEPTD 0.752041611869764 0.0964274565937789 -0.0516666666666667 0.309666666666667 2.35993471975884 13.4318759344563 -0.0516666666666667 0.309666666666667 0.580773147249124 0.0453745578969519 -0.587114952531293 2.58771114471476 O14976 GAK O14976.S770.p_GAK O14976_S770s _1_1_770_770 O14976 O14976|O14976-2 Cyclin-G-associated kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15894.15894.4 32.24 32.24 5.313 11 1 1 0 1189.8086 4676.2389 S770s TMT10 749 (K) FGKPELPRQPGSTAQYDAGAGsPEAEPTDSDSPPSSSADASR (F) FGKPELPRQPGS(0.0)T(0.0)AQY(0.0)DAGAGS(0.99)PEAEPT(0.0)DS(0.0)DS(0.0)PPS(0.0)S(0.0)S(0.0)ADAS(0.0)R K:TMT10,s:Phosphorylated S GAK 144671.4 4 4 746.1 233.2 HUMAN 1 -2.3599 13.4319 QYEEAKRSMANLKIE-p Q6AWC2-6;S318-p QYEEAKRSMANLKIE 0.496747780420215 0.235528988549518 -0.189 0.149 5.59578651978639 8.26990625941142 -0.189 0.149 0.275690212423606 0.14893932252736 -1.21220572332617 1.68140060435831 Q6AWC2 WWC2 Q6AWC2.6.S318.p_WWC2 Q6AWC2-6_S318s _1_1_318_318 Q6AWC2-6 Q6AWC2-6 Isoform 6 of Protein WWC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18886.18886.4 14.05 14.05 5.289 3 1 1 0 662.8661 2568.4787 S318s TMT10 308 (R) LSLQYEEAKRsMANLK (I) LS(0.0)LQY(0.0)EEAKRS(0.99)MANLK K:TMT10,s:Phosphorylated S WWC2 137930.4 1 5 1158.1 171.22 HUMAN 1 -5.5958 8.2699 QYETLSDSDD_____-p O75376-2;S2335-p QYETLSDSDD_____ 0.233628206047255 0.901272848642271 0.184666666666667 -0.0123333333333333 12.1274652195724 0.630244767287106 0.184666666666667 -0.0123333333333333 0.0612707897267083 0.864919170773193 2.35496394199988 -0.178354575032685 O75376 NCOR1 O75376.2.S2335.p_NCOR1 O75376-2_S2333sS2335s_2_2_2333_2335 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30902.31545.3 11.83 11.83 1.171 5 2 2 0 975.434 2764.3515 S2333s S2335s TMT10 2316 (R) IWEREPAPLLSAQYETLsDsDD (-) IWEREPAPLLS(0.0)AQY(0.0)ET(0.0)LS(0.99)DS(0.99)DD s:Phosphorylated S NCOR1 259453.1 3 47 35.1 889.74 HUMAN 1 12.1275 -0.6302 QYIESSDSEEIETSE-p Q14527;S400-p QYIESSDSEEIETSE 0.263859982002435 0.0859910956552463 0.22 0.223666666666667 10.98058089977 14.1045238961701 0.22 0.223666666666667 0.0797887956938885 0.0388640101051219 2.15270762305109 2.71048880132818 Q14527 HLTF Q14527.S400.p_HLTF Q14527_S400s _1_1_400_400 Q14527 Q14527|A0A0C4DGA6|Q14527-2 Helicase-like transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22881.22881.3 21.16 16.7 2.066 7 1 1 0 1007.8265 2941.493 S400s TMT10 390 (K) TAVQYIESSDsEEIETSELPQK (M) T(0.0)AVQY(0.0)IES(0.0)S(0.0)DS(0.99)EEIET(0.0)S(0.0)ELPQK K:TMT10,s:Phosphorylated S HLTF 114953.6 3 2 1484.1 138.09 HUMAN 1 10.9806 14.1045 QYIKNSVTPDMMEEM-p P46777;T232-p QYIKNSVTPDMMEEM 0.701611654046682 0.193046851648032 0.055 0.146666666666667 2.89360368884561 9.39251284478068 0.055 0.146666666666667 0.513617285349684 0.115013472395573 0.698717899681673 1.87562593241441 P46777 RPL5 P46777.T232.p_RPL5 P46777_T232t _1_1_232_232 P46777 P46777 60S ribosomal protein L5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20886.20886.3 12.83 7.36 1.187 3 1 1 0 824.0733 2390.2373 T232t TMT10 229 (K) NSVtPDMMEEMYKK (A) NS(0.0)VT(0.99)PDMMEEMY(0.0)KK K:TMT10,t:Phosphorylated T RPL5 34590.2 1 3 3573.1 47.97 HUMAN 1 2.8936 9.3925 QYIRYTPSQQGVAFN-p Q13573;S182-p QYIRYTPSQQGVAFN 0.570381806910906 0.332052623829058 -0.0783333333333333 -0.134 4.48706744151465 6.34374632248877 -0.0783333333333334 -0.134 0.355871538482945 0.232073401497574 -1.00916109972386 -1.34523876687254 Q13573 SNW1 Q13573.S182.p_SNW1 Q13573_S182s _1_1_182_182 Q13573 G3V3A4|Q13573|G3V4X8 SNW domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15624.15624.3 7.43 7.43 1.463 4 1 1 0 698.3519 2013.0806 S182s TMT10 179 (R) YTPsQQGVAFNSGAK (Q) Y(0.0)T(0.0)PS(0.99)QQGVAFNS(0.0)GAK K:TMT10,s:Phosphorylated S SNW1 61550.4 1 3 936.1 198.57 HUMAN 1 -4.4871 -6.3437 QYIYKRKSDGIYIIN-p P08865;S43-p QYIYKRKSDGIYIIN 0.142230539633047 0.0759896620941106 -0.497 0.21 17.3085235174915 14.8550264876745 -0.497 0.21 0.0185843616519267 0.0326962052682596 -3.32365034315467 2.84946784392279 P08865 RPSA P08865.S43.p_RPSA P08865_S43s _1_1_43_43 P08865 A0A0C4DG17|P08865 40S ribosomal protein SA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20041.20041.4 17.09 17.09 11.032 2 1 1 0 547.5771 2107.3206 S43s TMT10 41 (K) RKsDGIYIINLK (R) RKS(0.99)DGIY(0.0)IINLK K:TMT10,s:Phosphorylated S RPSA 32967.6 3 1 3641.1 46.26 HUMAN 1 -17.3085 14.855 QYKQRSLSPVAAPPL-p Q8NDT2;S267-p QYKQRSLSPVAAPPL 0.28377835512685 0.13701485269334 0.181 0.159333333333333 10.3297582175345 11.3743252933444 0.181 0.159333333333333 0.0926881423721314 0.0728731379202955 2.03906350853076 2.2207819769791 Q8NDT2 RBM15B Q8NDT2.S267.p_RBM15B Q8NDT2_S267s _1_1_267_267 Q8NDT2 Q8NDT2 Putative RNA-binding protein 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15913.15913.4 14.15 14.15 2.093 2 1 1 0 450.5 1719.0115 S267s TMT10 265 (R) SLsPVAAPPLREPR (A) S(0.0)LS(0.99)PVAAPPLREPR s:Phosphorylated S RBM15B 97489 12 7 199.1 454.11 HUMAN 1 10.3298 11.3743 QYLNSPPSPGVEDPA-p Q69YU3;S165-p QYLNSPPSPGVEDPA 0.442214552646437 0.306925223364491 0.136333333333333 0.126 6.53054000510843 6.77880561689119 0.136333333333333 0.126 0.222303345977097 0.209951720689256 1.37855964338448 1.42185554462515 Q69YU3 ANKRD34A Q69YU3.S165.p_ANKRD34A Q69YU3_S165s _1_1_165_165 Q69YU3 Q69YU3 Ankyrin repeat domain-containing protein 34A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23683.23683.4 27.08 27.08 2.164 9 1 1 0 1080.7576 4240.0454 S165s TMT10 158 (R) QYLNSPPsPGVEDPAPASPSPGFCTSPSEIQLQTAGGGGR (G) QY(0.0)LNS(0.0)PPS(0.99)PGVEDPAPAS(0.0)PS(0.0)PGFCT(0.0)S(0.0)PS(0.0)EIQLQT(0.0)AGGGGR C:Carbamidomethylation,s:Phosphorylated S ANKRD34A 52919.9 1 2 922.1 199.97 HUMAN 1 6.5305 6.7788 QYMKEVGSPPLDPTE-p A0A1B0GUA3;S203-p QYMKEVGSPPLDPTE 0.519300429713537 0.38545006144589 0.0866666666666667 -0.0863333333333333 5.25492146955279 5.50394914984711 0.0866666666666667 -0.0863333333333333 0.298200146889431 0.281582126906861 1.15057530803787 -1.19539767121834 A0A1B0GUA3 NotFound A0A1B0GUA3.S203.p_NotFound A0A1B0GUA3_S203s _1_1_203_203 A0A1B0GUA3 A0A1B0GUA3|Q96EK5|A0A0D9SFK7|A0A1B0GTE6 KIF1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13762.13762.2 13.53 13.53 1.79 2 1 1 0 803.3895 1525.806 S203s TMT10 200 (K) EVGsPPLDPTER (F) EVGS(0.99)PPLDPT(0.0)ER s:Phosphorylated S KIF1BP 75466.9 1 1 2127.1 96.61 HUMAN 1 5.2549 -5.5039 QYNMDQFTPVKIEGY-p P52907;T63-p QYNMDQFTPVKIEGY 0.444245028437086 0.498524327698652 0.133666666666667 0.0756666666666667 6.49475335856086 4.04478639321021 0.133666666666667 0.0756666666666667 0.224142733571789 0.394022807093628 1.37224906846316 0.925522880530093 P52907 CAPZA1 P52907.T63.p_CAPZA1 P52907_T63t _1_1_63_63 P52907 P52907 F-actin-capping protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26335.26335.5 22.25 18.3 2.496 5 1 1 0 978.6645 4809.3619 T63t TMT10 48 (R) EGAAHAFAQYNMDQFtPVKIEGYEDQVLITEHGDLGNSR (F) EGAAHAFAQY(0.0)NMDQFT(0.99)PVKIEGY(0.0)EDQVLIT(0.0)EHGDLGNS(0.0)R K:TMT10,t:Phosphorylated T CAPZA1 33093.3 2 2 3478.1 50.06 HUMAN 1 6.4948 4.0448 QYNRAEDSICLADSK-p Q7Z5K2-2;S941-p QYNRAEDSICLADSK 0.86012285513759 0.00384596429883523 0.0393333333333333 -0.812 1.27849776304623 35.7405545187533 0.0393333333333333 -0.812 0.744989623370258 0.000266651817464709 0.342348120751213 -8.37087314206788 Q7Z5K2 WAPL Q7Z5K2.2.S941.p_WAPL Q7Z5K2-2_S941s _1_1_941_941 Q7Z5K2-2 Q7Z5K2-3|Q7Z5K2-2|Q8WVX6 Isoform 2 of Wings apart-like protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12830.12830.5 21.24 21.24 7.494 3 1 1 0 634.525 3088.625 S941s Hydrogen 938 (R) AEDsICLADSKPLPHQNVTNHVGK (A) AEDS(0.99)ICLADS(0.0)KPLPHQNVT(0.0)NHVGK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S WAPL 138966.1 2 15 244.1 413.16 HUMAN 1 1.2785 -35.7406 QYPAGYPSDKEGKKP-p Q96PU4;S643-p QYPAGYPSDKEGKKP 0.610726296189585 0.459755534379664 -0.0676666666666667 -0.079 3.96808775571586 4.49981893921247 -0.0676666666666667 -0.079 0.401043262323895 0.35482818199138 -0.911024633685357 -1.01135619859671 Q96PU4 UHRF2 Q96PU4.S643.p_UHRF2 Q96PU4_S643s _1_1_643_643 Q96PU4 Q96PU4 E3 ubiquitin-protein ligase UHRF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16903.16903.3 13.72 13.72 2.922 3 1 1 0 592.9726 1696.931 S643s TMT10 635 (R) LQYPAGYPsDK (E) LQY(0.0)PAGY(0.0)PS(0.99)DK K:TMT10,s:Phosphorylated S UHRF2 91752.1 4 1 3288.1 54.94 HUMAN 1 -3.9681 -4.4998 QYRAIRISPRTHFRP-p Q92628;S1103-p QYRAIRISPRTHFRP 0.191102046396083 0.0173655699062675 0.237666666666667 0.370333333333333 14.0425211097172 24.2671689703861 0.237666666666667 0.370333333333333 0.0394228383314822 0.00374354538742627 2.70072878164395 4.85470665134522 Q92628 KIAA0232 Q92628.S1103.p_KIAA0232 Q92628_S1103s _1_1_1103_1103 Q92628 Q92628 Uncharacterized protein KIAA0232 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8942.8942.3 7.19 7.19 99 1 1 1 0 374.5513 1041.673 S1103s TMT10 1099 (R) AIRIsPR (T) AIRIS(1.0)PR s:Phosphorylated S KIAA0232 157125.3 2 10 568.1 270.65 HUMAN 1 14.0425 24.2672 QYSEDEDTDTDEYKE-p Q9NPQ8-3;T447-p QYSEDEDTDTDEYKE 0.177701975942063 0.00695862630409929 0.617333333333333 -0.840333333333333 14.8730995903066 30.9276366874477 0.617333333333333 -0.840333333333333 0.0325604232020733 0.000807674425158472 2.85468460686054 -6.70833148267092 Q9NPQ8 RIC8A Q9NPQ8.3.T447.p_RIC8A Q9NPQ8-3_T447t _1_1_447_447 Q9NPQ8-3 Q9NPQ8-3|Q9NPQ8-4|Q9NPQ8-2 Isoform 3 of Synembryn-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13635.13635.5 22.79 22.79 2.789 5 1 1 0 752.5538 3678.7684 T447t TMT10 430 (R) GLMAGGRPEGQYSEDEDtDTDEYKEAK (A) GLMAGGRPEGQY(0.0)S(0.0)EDEDT(0.99)DT(0.0)DEY(0.0)KEAK K:TMT10,t:Phosphorylated T RIC8A 60884.7 1 2 3369.1 52.69 HUMAN 1 14.8731 -30.9276 QYSQQQNSPQKHKNK-p P46013;S357-p QYSQQQNSPQKHKNK 0.89693678068824 0.00333122814740401 0.022 -0.953333333333333 0.92550121811951 37.0693921944057 0.022 -0.953333333333334 0.808071664392522 0.000196363507306741 0.255085359059045 -8.88818476154888 P46013 MKI67 P46013.S357.p_MKI67 P46013_S357s _1_1_357_357 P46013 P46013 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11867.11867.4 19.89 19.89 6.226 4 1 1 0 665.6033 2579.4219 S357s TMT10 345 (K) MKTPVQYSQQQNsPQK (H) MKT(0.0)PVQY(0.0)S(0.0)QQQNS(0.99)PQK K:TMT10,s:Phosphorylated S MKI67 360912.4 17 5 5.1 1918.46 HUMAN 1 0.9255 -37.0694 QYTSRTASPLPLRPD-p Q9HCK8;S1995-p QYTSRTASPLPLRPD 0.330213610050389 0.00225740740261622 0.144 0.763333333333333 8.99547431482934 40.9719619245745 0.144 0.763333333333334 0.12602379934535 7.99473011621958e-05 1.80757940200344 10.5772959279125 Q9HCK8 CHD8 Q9HCK8.S1995.p_CHD8 Q9HCK8_S1995s _1_1_1995_1995 Q9HCK8 Q9HCK8|Q9HCK8-2 Chromodomain-helicase-DNA-binding protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17831.18038.3 17.67 17.67 2.149 2 1 1 0 710.3972 2049.2108 S1995s TMT10 1993 (R) TAsPLPLRPDAPVEK (S) T(0.0)AS(0.99)PLPLRPDAPVEK K:TMT10,s:Phosphorylated S CHD8 292339.6 4 5 419.1 320.67 HUMAN 1 8.9955 40.972 QYTYNNWSPPVQSNE-p Q93008;S2443-p QYTYNNWSPPVQSNE 0.623139860687409 0.206775832088145 -0.0986666666666667 -0.129666666666667 3.81728131241566 9.00496535975653 -0.0986666666666667 -0.129666666666667 0.415213885581913 0.125748688430816 -0.882037589975125 -1.80857142988439 Q93008 USP9X Q93008.S2443.p_USP9X Q93008_S2443s _1_1_2443_2443 Q93008 Q93008|Q93008-1 Probable ubiquitin carboxyl-terminal hydrolase FAF-X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19961.20073.3 27.6 27.6 4.532 10 1 1 0 1253.8881 3679.6837 S2443s Hydrogen 2429 (R) RPYTGNPQYTYNNWsPPVQSNETSNGYFLER (S) RPY(0.0)T(0.0)GNPQY(0.0)T(0.0)Y(0.0)NNWS(0.99)PPVQS(0.0)NET(0.0)S(0.0)NGY(0.0)FLER s:Phosphorylated S USP9X 295697.8 21 6 1218.1 165.22 HUMAN 1 -3.8173 -9.005 RAAAGACTPPCT___-p Q96P11-2;T462-p RAAAGACTPPCT___ 0.403468715502219 0.554114147018451 0.247666666666667 0.0613333333333334 7.27744134192895 3.4543468846658 0.247666666666667 0.0613333333333334 0.187178458269567 0.451403904776985 1.50949577955024 0.811152394524244 Q96P11 NSUN5 Q96P11.2.T462.p_NSUN5 Q96P11-2_T462t _1_1_462_462 Q96P11-2 Q96P11-2|Q3KNT7-3 Isoform 2 of Probable 28S rRNA (cytosine-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7859.8063.2 9.07 9.07 9.073 2 1 1 0 693.2935 1305.6129 T462t TMT10 456 (R) AAAGACtPPCT (-) AAAGACT(0.99)PPCT(0.0) C:Carbamidomethylation,t:Phosphorylated T NSUN5 51151.8 1 5 2119.1 96.89 HUMAN 1 7.2774 3.4543 RAADSQNSGEGNTGA-p P12270;S2037-p RAADSQNSGEGNTGA 0.471941186312508 0.0232735236451027 0.099 0.466666666666667 6.01612328696923 22.288285980074 0.099 0.466666666666667 0.250257828184637 0.00590434059430463 1.28743532293604 4.3834522458391 P12270 TPR P12270.S2037.p_TPR P12270_S2037s _1_1_2037_2037 P12270 P12270 Nucleoprotein TPR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12392.12392.3 25.54 25.54 3.02 7 1 1 0 932.4039 2715.2291 S2037s TMT10 2031 (R) AADSQNsGEGNTGAAESSFSQEVSR (E) AADS(0.0)QNS(0.99)GEGNT(0.0)GAAES(0.0)S(0.0)FS(0.0)QEVS(0.0)R s:Phosphorylated S TPR 267687.4 3 17 385.1 333.55 HUMAN 1 6.0161 22.2883 RAADSSDSDGAEESP-p P16383;S19-p RAADSSDSDGAEESP 0.992821359885708 0.542991428044876 0.00666666666666667 -0.161333333333333 0.0655242340753385 3.5666600473996 0.00666666666666672 -0.161333333333333 0.985025733804793 0.439879776034024 0.0196513882080203 -0.833203413177039 P16383 GCFC2 P16383.S19.p_GCFC2 P16383_S16sS17sS19s_3_3_16_19 P16383 P16383|P16383-2|P16383-4|P16383-3 GC-rich sequence DNA-binding factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8342.8926.3 14 14 3.988 4 3 3 0 828.9728 2245.0054 S16s S17s S19s TMT10 13 (R) AADssDsDGAEESPAEPGAPR (E) AADS(0.99)S(0.99)DS(0.99)DGAEES(0.0)PAEPGAPR s:Phosphorylated S GCFC2 89953.6 2 8 2330.1 87.66 HUMAN 1 0.0655 -3.5667 RAAGGAPSPPPPVRR-p Q4KMP7;S678-p RAAGGAPSPPPPVRR 0.38996170793626 0.171834089513715 0.116666666666667 0.155 7.5650709343426 10.0559391417451 0.116666666666667 0.155 0.175183382085969 0.0987202134764352 1.55960746132922 1.99062063573576 Q4KMP7 TBC1D10B Q4KMP7.S678.p_TBC1D10B Q4KMP7_S678s _1_1_678_678 Q4KMP7 Q4KMP7|Q4KMP7-2 TBC1 domain family member 10B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9098.9517.3 14.78 14.78 99 1 1 1 0 494.927 1402.8004 S678s TMT10 672 (R) AAGGAPsPPPPVR (R) AAGGAPS(1.0)PPPPVR s:Phosphorylated S TBC1D10B 87710.7 11 10 462.1 304.34 HUMAN 1 7.5651 10.0559 RAAKGARSVEEE___-p Q9BVC6;S239-p RAAKGARSVEEE___ 0.809934241634077 0.0431798481714385 0.0556666666666667 -0.353 1.75981899860835 18.2842196431443 0.0556666666666667 -0.353 0.66683456037223 0.0148449259538164 0.454929879291842 -3.51707912502134 Q9BVC6 TMEM109 Q9BVC6.S239.p_TMEM109 Q9BVC6_S239s _1_1_239_239 Q9BVC6 Q9BVC6 Transmembrane protein 109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3722.3722.2 7.43 7.43 99 1 1 1 0 593.2707 1105.5687 S239s TMT10 236 (K) GARsVEEE (-) GARS(1.0)VEEE s:Phosphorylated S TMEM109 26209.5 1 1 7164.1 7.43 HUMAN 1 1.7598 -18.2842 RAAKVPSTPPPKAAP-p Q9H7N4;T976-p RAAKVPSTPPPKAAP 0.305809269646264 0.465808561845044 0.244333333333333 0.0846666666666667 9.64407962171756 4.42417216445726 0.244333333333333 0.0846666666666667 0.108540554975711 0.361062831444264 1.91993570664089 0.997208324133915 Q9H7N4 SCAF1 Q9H7N4.T976.p_SCAF1 Q9H7N4_T976t _1_1_976_976 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10276.10479.3 14.5 10.92 1.383 2 1 1 0 620.704 1780.13 T976t TMT10 970 (R) AAKVPStPPPK (A) AAKVPS(0.0)T(0.99)PPPK K:TMT10,t:Phosphorylated T SCAF1 139895 9 21 76.1 647.25 HUMAN 1 9.6441 4.4242 RAAMQRGSLPANVPT-p E7EWR4;S330-p RAAMQRGSLPANVPT 0.403178827132068 0.995186789721184 0.148666666666667 0.000666666666666667 7.28212125372801 0.0288472025021166 0.148666666666667 0.000666666666666691 0.186976865362304 0.9933796975585 1.51031227209743 0.00868678885999598 E7EWR4 CSTF2 E7EWR4.S330.p_CSTF2 E7EWR4_S330s _1_1_330_330 E7EWR4 E7EWR4|P33240 Cleavage stimulation factor subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13113.13113.3 7.93 7.93 2.782 2 1 1 0 659.0106 1895.0483 S330s TMT10 324 (R) AAMQRGsLPANVPTPR (G) AAMQRGS(0.99)LPANVPT(0.0)PR s:Phosphorylated S CSTF2 63055.8 1 4 2335.1 87.35 HUMAN 1 7.2821 0.0288 RAANLWPSPLMIKRS-p P03372;S294-p RAANLWPSPLMIKRS 0.409353922246247 0.00949153116870816 -0.12 0.422 7.1499802057807 28.5426665134797 -0.12 0.422 0.192753369845977 0.00139872825731957 -1.48724176426226 5.99179707446992 P03372 ESR1 P03372.S294.p_ESR1 P03372_S294s _1_1_294_294 P03372 P03372|P03372-3|P03372-4|H0Y4W6 Estrogen receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26545.26545.3 12.87 10.31 99 1 1 1 0 679.0499 1955.1665 S294s TMT10 288 (R) AANLWPsPLMIKR (S) AANLWPS(1.0)PLMIKR K:TMT10,s:Phosphorylated S ESR1 66956.6 4 1 3925.1 40.59 HUMAN 1 -7.15 28.5427 RAAPRAQSGSDSSPE-p Q9UQ35;S1616-p RAAPRAQSGSDSSPE 0.744285117631343 0.750215413907751 0.0796666666666666 0.0600000000000001 2.434545571022 1.72505684681911 0.0796666666666667 0.06 0.570880807810359 0.672193510401343 0.603020998741959 0.446965333117202 Q9UQ35 SRRM2 Q9UQ35.S1616.p_SRRM2 Q9UQ35_S1616s _1_1_1616_1616 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6665.6665.3 16.57 13.52 1.113 4 1 1 0 740.7058 2140.1399 S1616s TMT10 1614 (R) AQsGSDSSPEPKAPAPR (A) AQS(0.99)GS(0.0)DS(0.0)S(0.0)PEPKAPAPR K:TMT10,s:Phosphorylated S SRRM2 300351.7 2 109 2.1 3310.34 HUMAN 1 2.4345 1.7251 RAAPRPRSAEDWWWD-p Q8N531;S21-p RAAPRPRSAEDWWWD 0.370314865600616 0.0673698167017742 -0.137333333333333 -0.235333333333333 7.9993002914693 15.5855711204922 -0.137333333333333 -0.235333333333333 0.158514856126562 0.0276339449410585 -1.63503922846229 -2.98697084424776 Q8N531 FBXL6 Q8N531.S21.p_FBXL6 Q8N531_S21s _1_1_21_21 Q8N531 Q8N531|Q8N531-2 F-box/LRR-repeat protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27544.27544.3 7.65 7.65 99 1 1 1 0 666.3134 1916.9605 S21s TMT10 21 (R) sAEDWWWDRLAPR (G) S(1.0)AEDWWWDRLAPR s:Phosphorylated S FBXL6 59671.1 2 1 3250.1 55.9 HUMAN 1 -7.9993 -15.5856 RAAPTRGSPTKNSSP-p Q8IYH5;S391-p RAAPTRGSPTKNSSP 0.66434278289756 0.989927955547472 0.0826666666666667 0.00333333333333337 3.32385793598123 0.0666152838658024 0.0826666666666666 0.00333333333333336 0.465172686525992 0.984778303275491 0.785457716754861 0.01997433061772 Q8IYH5 ZZZ3 Q8IYH5.S391.p_ZZZ3 Q8IYH5_S391s _1_1_391_391 Q8IYH5 Q8IYH5|Q8IYH5-2|Q8IYH5-4 ZZ-type zinc finger-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.3813.3813.3 7.45 2.72 2.19 3 1 1 0 560.6501 1599.9695 S391s TMT10 384 (R) RAAPTRGsPTK (N) RAAPT(0.0)RGS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S ZZZ3 103390.7 6 8 1027.1 186.83 HUMAN 1 3.3239 0.0666 RAARAEASPRREPAY-p C9J069;S129-p RAARAEASPRREPAY 0.572664711568272 0.0146211069980059 0.116666666666667 -0.357333333333333 4.45823769460677 25.4144555316255 0.116666666666667 -0.357333333333333 0.358241777042867 0.00287444793618461 1.00376972738683 -5.14295910997335 C9J069 C9orf172 C9J069.S129.p_C9orf172 C9J069_S129s _1_1_129_129 C9J069 C9J069 Uncharacterized protein C9orf172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7753.7753.4 9.5 9.5 7.501 2 1 1 0 499.0102 1913.0555 S129s TMT10 126 (R) AEAsPRREPAYPALR (A) AEAS(0.99)PRREPAY(0.0)PALR s:Phosphorylated S C9orf172 107960.6 1 4 430.1 316.49 HUMAN 1 4.4582 -25.4145 RAATKRLSQPAGGLL-p Q676U5;S269-p RAATKRLSQPAGGLL 0.844396662154091 0.31520680144833 -0.0403333333333333 0.104666666666667 1.42160701153635 6.62503206597555 -0.0403333333333334 0.104666666666667 0.720840698527547 0.217518797353873 -0.376528786509907 1.39483894895298 Q676U5 ATG16L1 Q676U5.S269.p_ATG16L1 Q676U5_S269s _1_1_269_269 Q676U5 Q676U5|Q676U5-3|Q676U5-4 Autophagy-related protein 16-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34915.34915.3 11.12 11.12 11.122 3 1 1 0 775.4144 2244.2662 S269s TMT10 267 (K) RLsQPAGGLLDSITNIFGR (R) RLS(0.99)QPAGGLLDS(0.0)IT(0.0)NIFGR s:Phosphorylated S ATG16L1 68948.5 2 3 3570.1 48.02 HUMAN 1 -1.4216 6.625 RAAVGQESPGGLEAG-p Q29RF7;S1305-p RAAVGQESPGGLEAG 0.472221263026578 0.397115905477365 -0.148333333333333 0.094 6.01134192099393 5.33207670463547 -0.148333333333333 0.0940000000000001 0.25053350131445 0.292949208893078 -1.28658381637782 1.16433089422642 Q29RF7 PDS5A Q29RF7.S1305.p_PDS5A Q29RF7_S1305s _1_1_1305_1305 Q29RF7 Q29RF7 Sister chromatid cohesion protein PDS5 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12689.12689.4 20.01 20.01 99 1 1 1 0 655.6085 2539.4447 S1305s TMT10 1299 (R) AAVGQEsPGGLEAGNAKAPK (L) AAVGQES(1.0)PGGLEAGNAKAPK K:TMT10,s:Phosphorylated S PDS5A 152367.9 14 6 1024.1 187.11 HUMAN 1 -6.0113 5.3321 RACGERLSLGLSRAQ-p Q9NR12;S78-p RACGERLSLGLSRAQ 0.532081809207476 0.0320687122379841 -0.0843333333333333 -0.406666666666667 5.07011554587474 20.1690188029679 -0.0843333333333333 -0.406666666666667 0.311163354968453 0.00961829558995423 -1.11689176793613 -3.91161806409118 Q9NR12 PDLIM7 Q9NR12.S78.p_PDLIM7 Q9NR12_S78s _1_1_78_78 Q9NR12 Q9NR12|Q9NR12-2|Q9NR12-4 PDZ and LIM domain protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14509.14509.3 11 11 1.542 2 1 1 0 543.2778 1547.8525 S78s TMT10 72 (R) ACGERLsLGLSR (A) ACGERLS(0.99)LGLS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PDLIM7 50927.8 2 2 3139.1 59.65 HUMAN 1 -5.0701 -20.169 RACKEAAYHPEVAPD-p Q9Y490;Y2224-p RACKEAAYHPEVAPD 0.142230539633047 0.702323671695879 0.853 -0.124666666666667 17.3064688912166 2.1092461192358 0.853 -0.124666666666667 0.0185931559040027 0.615283668970217 3.63710844865334 -0.532798596802148 Q9Y490 TLN1 Q9Y490.Y2224.p_TLN1 Q9Y490_Y2224y _1_1_2224_2224 Q9Y490 Q9Y490 Talin-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.9897.9897.3 12.76 10.14 99 1 1 1 0 588.2817 1682.87 Y2224y TMT10 2221 (K) EAAyHPEVAPDVR (L) EAAY(1.0)HPEVAPDVR y:Phosphorylated Y TLN1 271930.4 1 3 49.1 44.07 HUMAN 1 17.3065 -2.1092 RACPESASLLGHPRV-p F5H8L4;S340-p RACPESASLLGHPRV 0.574777890570195 0.00917359434218356 -0.095 0.432 4.42209629211429 28.8023030608129 -0.095 0.432 0.361235456134709 0.00131755785319093 -0.997001642117136 6.06672359407476 F5H8L4 NotFound F5H8L4.S340.p_NotFound F5H8L4_S340s _1_1_340_340 F5H8L4 F5H8L4 SID1 transmembrane family member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10535.10535.3 18.07 18.07 2.218 2 1 1 0 568.6095 1623.8474 S340s TMT10 334 (R) ACPESAsLLGHPR (V) ACPES(0.0)AS(0.99)LLGHPR C:Carbamidomethylation,s:Phosphorylated S SIDT2 95262.4 2 1 2857.2 68 HUMAN 1 -4.4221 28.8023 RACRPPGSPGRAPPP-p O95685;S46-p RACRPPGSPGRAPPP 0.204713889706557 0.00934853819306297 -0.216666666666667 -0.413 13.322337572917 28.6443748351436 -0.216666666666667 -0.413 0.0465335561074847 0.00136635174722365 -2.56931591966607 -6.02106205096 O95685 PPP1R3D O95685.S46.p_PPP1R3D O95685_S46s _1_1_46_46 O95685 O95685 Protein phosphatase 1 regulatory subunit 3D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6339.6339.3 13.04 5.34 3.243 3 1 1 0 922.1033 2684.3347 S46s TMT10 40 (R) ACRPPGsPGRAPPPTPAPSGCDPR (L) ACRPPGS(0.99)PGRAPPPT(0.0)PAPS(0.0)GCDPR C:Carbamidomethylation,s:Phosphorylated S PPP1R3D 33300.2 7 3 2020.1 102.1 HUMAN 1 -13.3223 -28.6444 RACRTPESFLGPSAS-p Q9H201;S498-p RACRTPESFLGPSAS 0.127518924115859 0.0313853576003486 0.291333333333333 0.289 18.5551919537805 20.3073639208987 0.291333333333333 0.289 0.0139470001194389 0.00931673210550945 3.57550995595902 3.94146591729287 Q9H201 EPN3 Q9H201.S498.p_EPN3 Q9H201_T495tS498s_2_2_495_498 Q9H201 Q9H201 Epsin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.34933.34933.4 14.34 10.52 2.919 6 2 2 0 792.3984 3006.6334 T495t S498s TMT10 492 (R) ACRtPEsFLGPSASSLVNLDSLVK (A) ACRT(0.99)PES(0.99)FLGPS(0.0)AS(0.0)S(0.0)LVNLDS(0.0)LVK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S EPN3 68392.2 11 17 953.1 196.01 HUMAN 1 18.5552 20.3074 RADGRRWSLASLPSS-p O60307;S85-p RADGRRWSLASLPSS 0.55148640387609 0.542991428044876 0.0946666666666667 -0.059 4.77049274160293 3.56715755694774 0.0946666666666667 -0.059 0.333388585032949 0.439829388137501 1.06182680836071 -0.83330076234946 O60307 MAST3 O60307.S85.p_MAST3 O60307_S85s _1_1_85_85 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20420.20420.3 16.81 16.81 1.132 16 1 1 0 1057.172 3089.5337 S85s TMT10 83 (R) RWsLASLPSSGYGTNTPSSTLSSSSSSR (E) RWS(0.99)LAS(0.0)LPS(0.0)S(0.0)GY(0.0)GT(0.0)NT(0.0)PS(0.0)S(0.0)T(0.0)LS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)R s:Phosphorylated S MAST3 143933.5 1 22 121.3 549.41 HUMAN 1 4.7705 -3.5672 RADNSSDSPTTLKLV-p Q5VWN6;S384-p RADNSSDSPTTLKLV 0.454180425050792 0.178800125828473 0.127 -0.151666666666667 6.32393996263952 9.83287595337337 0.127 -0.151666666666667 0.233134208593199 0.103923174541578 1.34207215649077 -1.95191488596557 Q5VWN6 FAM208B Q5VWN6.S384.p_FAM208B Q5VWN6_S384s _1_1_384_384 Q5VWN6 Q5VWN6 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10189.10189.3 8.5 8.5 1.335 5 1 1 0 591.9604 1693.9009 S384s TMT10 378 (R) ADNSSDsPTTLK (L) ADNS(0.0)S(0.0)DS(0.99)PT(0.0)T(0.0)LK K:TMT10,s:Phosphorylated S FAM208B 271861.7 2 4 275.1 391.61 HUMAN 1 6.3239 -9.8329 RADSGPVSPAASRNG-p O15018;S2037-p RADSGPVSPAASRNG 0.0963407255186167 0.367535132655113 0.332666666666667 0.169 21.5493576339748 5.76538045607159 0.332666666666667 0.169 0.00699945517457993 0.265131881869563 4.21963263138057 1.24236822067454 O15018 PDZD2 O15018.S2037.p_PDZD2 O15018_S2037s _1_1_2037_2037 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5993.5993.2 13.89 13.89 2.65 3 1 1 0 712.3436 1343.7117 S2037s TMT10 2031 (R) ADSGPVsPAASR (N) ADS(0.0)GPVS(0.99)PAAS(0.0)R s:Phosphorylated S PDZD2 304146 1 30 85.1 628.64 HUMAN 1 21.5494 5.7654 RADYDTLSLRSLRLG-p Q9Y446-2;S195-p RADYDTLSLRSLRLG 0.179710760288548 0.725960335257488 0.219 -0.034 14.7156099881608 1.91455239452587 0.219 -0.034 0.0337628423723281 0.643494383303503 2.82528181560528 -0.489738809084609 Q9Y446 PKP3 Q9Y446.2.S195.p_PKP3 Q9Y446-2_S195s _1_1_195_195 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12831.12831.3 12.9 12.9 1.216 4 1 1 0 625.978 1795.95 S195s TMT10 183 (R) GGVGSRADYDTLsLR (S) GGVGS(0.0)RADY(0.0)DT(0.0)LS(0.99)LR s:Phosphorylated S PKP3 89109.7 7 7 454.1 307.47 HUMAN 1 14.7156 -1.9146 RAEAAKITPQ_____-p Q96EZ8;T460-p RAEAAKITPQ_____ 0.664945111459205 0.448942352891444 -0.0783333333333333 -0.079 3.31542407626761 4.63562106742802 -0.0783333333333334 -0.079 0.466076914688447 0.343904527432386 -0.783781619137441 -1.03664276197682 Q96EZ8 MCRS1 Q96EZ8.T460.p_MCRS1 Q96EZ8_T460t _1_1_460_460 Q96EZ8 Q96EZ8-2|Q96EZ8-3|Q96EZ8-4 Microspherule protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9390.9390.2 10.16 5.59 99 1 1 1 0 733.9054 1386.8357 T460t TMT10 454 (R) AEAAKItPQ (-) AEAAKIT(1.0)PQ K:TMT10,t:Phosphorylated T MCRS1 52030.6 2 6 892.1 204.48 HUMAN 1 -3.3154 -4.6356 RAEAEAGSPRPDPRE-p A0A087X1U6;S2508-p RAEAEAGSPRPDPRE 0.171443489160655 0.361151344961525 -0.351 -0.219 15.2445489561776 5.86836807145873 -0.351 -0.219 0.0298913207216688 0.258918565885064 -2.92444361882378 -1.26078495928937 A0A087X1U6 EPPK1 A0A087X1U6.S2508.p_EPPK1 A0A087X1U6_S2508s _1_1_2508_2508 A0A087X1U6 P58107|A0A087X1U6|A0A075B730 Epiplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4781.4781.2 14.37 7.22 99 1 1 1 0 831.3956 1581.8182 S2508s TMT10 2502 (R) AEAEAGsPRPDPR (E) AEAEAGS(1.0)PRPDPR s:Phosphorylated S EPPK1 558101.4 2 10 680.1 245.5 HUMAN 1 -15.2445 -5.8684 RAEAESMYQIKYEEL-p P05787-2;Y310-p RAEAESMYQIKYEEL 0.389117860533563 0.0818421150515285 0.126333333333333 0.262666666666667 7.58452724029133 14.4089886707919 0.126333333333333 0.262666666666667 0.174400319399426 0.0362327362735927 1.56299244409981 2.76660509990743 P05787 KRT8 P05787.2.Y310.p_KRT8 P05787-2_Y310y _1_1_310_310 P05787-2 P05787-2 Isoform 2 of Keratin, type II cytoskeletal 8 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.30656.30656.3 24.59 21.99 2.194 4 1 1 0 942.8061 2746.4374 Y310y Hydrogen 304 (R) AEAESMyQIKYEELQSLAGK (H) AEAES(0.0)MY(0.99)QIKY(0.0)EELQS(0.0)LAGK K:TMT10-Lys-Only,y:Phosphorylated Y KRT8 56607.4 2 2 30.1 60.82 HUMAN 1 7.5845 14.409 RAEEEEASTEEEDKE-p A0A0G2JPP5;S688-p RAEEEEASTEEEDKE 0.425266233604415 0.0694882415719225 0.116666666666667 0.245 6.84091654871292 15.3991147123604 0.116666666666667 0.245 0.206970450575784 0.0288461945848736 1.43313674582546 2.95165677212679 A0A0G2JPP5 SCRIB A0A0G2JPP5.S688.p_SCRIB A0A0G2JPP5_S688sT689t_2_2_688_689 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15837.15837.3 19.97 19.97 9.169 4 2 2 0 1046.8042 2978.473 S688s T689t Hydrogen 682 (R) AEEEEAstEEEDKEGAVVSAPSVK (G) AEEEEAS(0.99)T(0.99)EEEDKEGAVVS(0.0)APS(0.0)VK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T SCRIB 178690.9 3 43 22.1 1004.81 HUMAN 1 6.8409 15.3991 RAEEKIKSVGGACVL-p P46776;S139-p RAEEKIKSVGGACVL 0.471500717888491 0.777320354742142 0.149333333333333 0.0323333333333333 6.02649766001692 1.51400348420719 0.149333333333333 0.0323333333333333 0.24966072882536 0.705666745114032 1.28928256788291 0.398223696136679 P46776 RPL27A P46776.S139.p_RPL27A P46776_S139s _1_1_139_139 P46776 P46776|E9PLX7|E9PJD9 60S ribosomal protein L27a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21879.21879.2 7.37 7.37 99 1 1 1 0 621.3135 1161.6499 S139s TMT10 139 (K) sVGGACVLVA (-) S(1.0)VGGACVLVA C:Carbamidomethylation,s:Phosphorylated S RPL27A 16675.2 1 2 4487.1 30.78 HUMAN 1 6.0265 1.514 RAEGHPDSLKDNSSC-p Q96NY8;S426-p RAEGHPDSLKDNSSC 0.412161436237322 0.0108339774994531 -0.161 0.648 7.10001665127014 27.5399321308136 -0.161 0.648 0.194983712387975 0.0017620035818329 -1.47850949366808 5.70909814426115 Q96NY8 PVRL4 Q96NY8.S426.p_PVRL4 Q96NY8_S426s _1_1_426_426 Q96NY8 Q96NY8 Nectin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7055.7055.3 8.86 8.86 99 1 1 1 0 497.9254 1411.7946 S426s TMT10 420 (R) AEGHPDsLK (D) AEGHPDS(1.0)LK K:TMT10,s:Phosphorylated S NECTIN4 55966.8 2 3 1903.1 108.23 HUMAN 1 -7.1 27.5399 RAENGERSDLEEDNE-p Q8WU90;S381-p RAENGERSDLEEDNE 0.576438939755698 0.490445693994919 -0.168333333333333 0.185333333333333 4.4016897334507 4.13629297201614 -0.1637470743106 0.185333333333333 0.362936817470184 0.385807532721496 -0.993175506160575 0.942930366301224 Q8WU90 ZC3H15 Q8WU90.S381.p_ZC3H15 Q8WU90_S381s_1_1_381_381 Q8WU90 Q8WU90 Zinc finger CCCH domain-containing protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4327.4327.3 15.7 15.7 15.695 1 1 1 0 691.6261 1991.9104 N377n S381s TMT10 375 (R) AEnGERsDLEEDNER (E) AEN(0.99)GERS(1.0)DLEEDN(0.0)ER n:Deamidated,s:Phosphorylated S ZC3H15 49001 5 5 2779.1 70.93 HUMAN 1 -4.4017 4.1363 RAEVRTHYDPPRKLM-p G8JLB6;Y195-p RAEVRTHYDPPRKLM 0.102231937186315 0.705250940818016 -0.37 -0.0396666666666666 20.9528305982257 2.08336036415944 -0.37 -0.0396666666666666 0.00803002579138222 0.618961966411884 -4.08648794135151 -0.527122509076921 G8JLB6 HNRNPH1 G8JLB6.Y195.p_HNRNPH1 G8JLB6_Y195y _1_1_195_195 G8JLB6 G8JLB6|P31943|P55795|E9PCY7 Heterogeneous nuclear ribonucleoprotein H GG20160819_MSz_CCLE_T4D7_pY_Injection_01.5020.5020.3 13.6 6.85 2.536 2 1 1 0 517.9409 1471.8422 Y195y TMT10 193 (R) THyDPPRK (L) T(0.0)HY(0.99)DPPRK K:TMT10,y:Phosphorylated Y HNRNPH1 51514.2 3 1 254.1 13.6 HUMAN 1 -20.9528 -2.0834 RAFAGPLSPAKAEDF-p Q86XL3;S528-p RAFAGPLSPAKAEDF 0.146100614134453 0.00184331395778701 -0.294333333333333 -0.996666666666667 17.0132457882825 42.9777461263644 -0.294333333333333 -0.996666666666667 0.0198918612453367 5.03761980119678e-05 -3.2652441304215 -11.5553348050636 Q86XL3 ANKLE2 Q86XL3.S528.p_ANKLE2 Q86XL3_S528s _1_1_528_528 Q86XL3 Q86XL3|Q86XL3-2 Ankyrin repeat and LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19041.19041.2 14.61 14.61 99 1 1 1 0 748.9187 1416.8615 S528s TMT10 522 (R) AFAGPLsPAK (A) AFAGPLS(1.0)PAK K:TMT10,s:Phosphorylated S ANKLE2 104968.3 4 5 897.1 204.02 HUMAN 1 -17.0132 -42.9777 RAFDSRFSNIKTLDD-p Q8IZH2;S844-p RAFDSRFSNIKTLDD 0.0752062711004065 0.880230607580439 -0.579 -0.0153333333333333 24.0520058174397 0.778997233671662 -0.579 -0.0153333333333333 0.00393368353750045 0.835795977467031 -4.80761680953877 -0.217464069474414 Q8IZH2 XRN1 Q8IZH2.S844.p_XRN1 Q8IZH2_S844s _1_1_844_844 Q8IZH2 Q8IZH2|Q8IZH2-2 5'-3' exoribonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17273.17273.3 11.85 5.35 1.474 2 1 1 0 574.9708 1642.9317 S844s TMT10 838 (R) AFDSRFsNIK (T) AFDS(0.0)RFS(0.99)NIK K:TMT10,s:Phosphorylated S XRN1 195644.2 1 2 2073.1 99.19 HUMAN 1 -24.052 -0.779 RAFGESSTESDEEEE-p O60927;T75-p RAFGESSTESDEEEE 0.755933385680123 0.00313960863177787 0.0603333333333333 0.696666666666667 2.32373363043147 37.5841635481791 0.0603333333333333 0.696666666666667 0.585634477970728 0.000174414924852428 0.579358803213867 9.09607773506463 O60927 PPP1R11 O60927.T75.p_PPP1R11 O60927_T75tS77s_2_2_75_77 O60927 O60927|Q5SRK2 Protein phosphatase 1 regulatory subunit 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8262.8262.4 21.43 21.43 1.174 5 2 2 0 782.7933 2968.2159 T75t S77s TMT10 69 (R) AFGESStEsDEEEEEGCGHTHCVR (G) AFGES(0.0)S(0.0)T(0.99)ES(0.99)DEEEEEGCGHT(0.0)HCVR C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S PPP1R11 14237.5 4 4 2904.1 66.4 HUMAN 1 2.3237 37.5842 RAFLQMDSPKHQSDP-p Q96BR1;S121-p RAFLQMDSPKHQSDP 0.377499561171247 0.0130314822708921 0.120333333333333 0.399666666666667 7.8205331778381 26.2516107341327 0.120333333333333 0.399666666666667 0.165175900141892 0.00237049436123307 1.60401171003562 5.36078536517699 Q96BR1 SGK3 Q96BR1.S121.p_SGK3 Q96BR1_S121sS126sS129s_3_3_121_129 Q96BR1 Q96BR1|Q96BR1-2 Serine/threonine-protein kinase Sgk3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16783.16783.5 9.32 9.32 4.062 5 3 3 0 764.5403 3578.7636 S121s S126s S129s TMT10 115 (R) AFLQMDsPKHQsDPsEDEDERSSQK (L) AFLQMDS(0.99)PKHQS(0.99)DPS(0.99)EDEDERS(0.0)S(0.0)QK K:TMT10,s:Phosphorylated S SGK3 57449.4 2 4 3364.1 52.81 HUMAN 1 7.8205 26.2516 RAFSSRSYTSGPGSR-p P05787-2;Y53-p RAFSSRSYTSGPGSR 0.0719549135296335 0.664780300015656 0.801 -0.0566666666666667 24.6732243147666 2.4272436471899 0.801 -0.0566666666666667 0.00340939695172324 0.571841454249684 4.96148780344258 -0.601393329837104 P05787 KRT8 P05787.2.Y53.p_KRT8 P05787-2_Y53y _1_1_53_53 P05787-2 P05787-2 Isoform 2 of Keratin, type II cytoskeletal 8 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.4531.4578.2 17.95 17.95 1.532 5 1 1 0 610.7786 1140.5847 Y53y TMT10 52 (R) SyTSGPGSR (I) S(0.0)Y(0.99)T(0.0)S(0.0)GPGS(0.0)R y:Phosphorylated Y KRT8 56607.4 2 1 30.1 60.82 HUMAN 1 24.6732 -2.4272 RAGAISASGPELQGA-p Q09666;S232-p RAGAISASGPELQGA 0.336172963233061 0.490526871979256 0.136333333333333 0.0756666666666667 8.82765727998089 4.13427299953371 0.136333333333333 0.0756666666666667 0.130988832711151 0.385987019658903 1.77853001252308 0.942546939287402 Q09666 AHNAK Q09666.S232.p_AHNAK Q09666_S232s _1_1_232_232 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11530.11530.3 20.53 20.53 2.429 3 1 1 0 726.0432 2096.15 S232s TMT10 226 (R) AGAISAsGPELQGAGHSK (L) AGAIS(0.0)AS(0.99)GPELQGAGHS(0.0)K K:TMT10,s:Phosphorylated S AHNAK 629603.7 4 10 1.1 4313.36 HUMAN 1 8.8277 4.1343 RAGEGRRSPRPDHPG-p P30291;S165-p RAGEGRRSPRPDHPG 0.205285323000472 0.103521516153491 0.263333333333333 0.254 13.2965145650838 13.0108256009701 0.263333333333333 0.254 0.0468110673286695 0.0499939486622208 2.56463708037626 2.51163841032174 P30291 WEE1 P30291.S165.p_WEE1 P30291_S165s _1_1_165_165 P30291 P30291 Wee1-like protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3802.3802.4 13.09 13.09 3.353 2 1 1 0 491.0102 1881.0495 S165s TMT10 165 (R) sPRPDHPGTPPHK (T) S(0.99)PRPDHPGT(0.0)PPHK K:TMT10,s:Phosphorylated S WEE1 72280.8 3 3 2739.1 72.21 HUMAN 1 13.2965 13.0108 RAGETRFTDTRKDEQ-p P13639;T57-p RAGETRFTDTRKDEQ 0.850933715821347 0.241617976435068 0.054 -0.202 1.35676498686936 8.12557171514951 0.054 -0.202 0.731683904054581 0.153972381996618 0.36112096283773 -1.65640344823392 P13639 EEF2 P13639.T57.p_EEF2 P13639_T57t _1_1_57_57 P13639 P13639 Elongation factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5948.5948.2 11.04 7.52 3.103 2 1 1 0 981.9858 1883.0023 T57t TMT10 56 (R) FtDTRKDEQER (C) FT(0.99)DT(0.0)RKDEQER K:TMT10,t:Phosphorylated T EEF2 96306.4 23 3 693.1 242.75 HUMAN 1 1.3568 -8.1256 RAGGLQDSDTEDECW-p Q9H6H4;S194-p RAGGLQDSDTEDECW 0.456411337786712 0.638659566628178 0.123833333333333 0.0503333333333334 6.27988392948444 2.65240426275103 0.123833333333333 0.0503333333333334 0.235511222631154 0.542949670276767 1.33427326483561 0.648796830893731 Q9H6H4 REEP4 Q9H6H4.S194.p_REEP4 Q9H6H4_S194sT196t_2_2_194_196 Q9H6H4 Q9H6H4 Receptor expression-enhancing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19632.19632.3 18.11 18.11 3.93 4 2 2 0 943.0384 2667.1678 S194s T196t TMT10 188 (R) AGGLQDsDtEDECWSDTEAVPR (A) AGGLQDS(0.99)DT(0.99)EDECWS(0.0)DT(0.0)EAVPR C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T REEP4 29565.8 4 8 1742.1 118.21 HUMAN 2 6.2799 2.6524 RAGHDGDSDGDSDDE-p O00418;S27-p RAGHDGDSDGDSDDE 0.601861285397072 0.207535722767541 0.0756666666666667 0.130333333333333 4.07357303049568 8.9822078388134 0.0756666666666667 0.130333333333333 0.391419715508658 0.126409355221155 0.931167273938915 1.80463509438754 O00418 EEF2K O00418.S27.p_EEF2K O00418_S27sS31s_2_2_27_31 O00418 O00418|H3BRH4 Eukaryotic elongation factor 2 kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22708.22708.5 21.48 21.48 5.453 7 2 2 0 875.959 4215.8209 S27s S31s TMT10 21 (R) AGHDGDsDGDsDDEEGYFICPITDDPSSNQNVNSK (V) AGHDGDS(0.99)DGDS(0.99)DDEEGY(0.0)FICPIT(0.0)DDPS(0.0)S(0.0)NQNVNS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EEF2K 82713.2 4 9 995.1 190.99 HUMAN 1 4.0736 8.9822 RAGLREGSEEKVKPP-p Q9H4G0;S564-p RAGLREGSEEKVKPP 0.408985042853845 0.00494389947456959 -0.114666666666667 -0.629 7.16145951691019 33.6341396568177 -0.114666666666667 -0.629 0.192244555138887 0.00043309785650543 -1.48924730712341 -7.6046721719734 Q9H4G0 EPB41L1 Q9H4G0.S564.p_EPB41L1 Q9H4G0_S564s _1_1_564_564 Q9H4G0 Q9H4G0|A0A0C4DH22|Q9H4G0-2|Q9H4G0-3 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6280.6280.3 8.22 8.22 99 1 1 1 0 538.6151 1533.8637 S564s TMT10 558 (R) AGLREGsEEK (V) AGLREGS(1.0)EEK K:TMT10,s:Phosphorylated S EPB41L1 99071.6 1 15 174.1 483.37 HUMAN 1 -7.1615 -33.6341 RAGNSLLSPKVLGIA-p Q9UKW4;S786-p RAGNSLLSPKVLGIA 0.304634153357389 0.177397758665734 -0.262666666666667 0.239 9.67234890862684 9.87836452560581 -0.262666666666667 0.239 0.107836332498806 0.102840350335581 -1.92483819479369 1.95980407984112 Q9UKW4 VAV3 Q9UKW4.S786.p_VAV3 Q9UKW4_S786s _1_1_786_786 Q9UKW4 Q9UKW4|Q9UKW4-2|Q9UKW4-3 Guanine nucleotide exchange factor VAV3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15821.15821.2 11.64 5.58 4.108 2 1 1 0 712.8997 1344.8251 S786s TMT10 780 (R) AGNSLLsPK (V) AGNS(0.0)LLS(0.99)PK K:TMT10,s:Phosphorylated S VAV3 99143.4 2 2 3815.1 42.54 HUMAN 1 -9.6723 9.8784 RAGNWPGSPQVSGPS-p O60244;S1112-p RAGNWPGSPQVSGPS 0.815451491549817 0.970148459727511 0.051 0.005 1.70018242968218 0.187163589802923 0.051 0.00499999999999999 0.676054576455996 0.957819426191703 0.441331729261103 0.0553796585033374 O60244 MED14 O60244.S1112.p_MED14 O60244_S1112s _1_1_1112_1112 O60244 O60244 Mediator of RNA polymerase II transcription subunit 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14222.14222.3 12.48 12.48 4.444 3 1 1 0 682.3298 1965.014 S1112s TMT10 1106 (R) AGNWPGsPQVSGPSPAAR (M) AGNWPGS(0.99)PQVS(0.0)GPS(0.0)PAAR s:Phosphorylated S MED14 162087.1 2 3 1597.1 128.88 HUMAN 1 1.7002 0.1872 RAGPRLLSPDAEELP-p Q2M3V2;S290-p RAGPRLLSPDAEELP 0.722764927699332 0.158409733807383 -0.0486666666666667 -0.157 2.66761681797712 10.5258687929893 -0.0486666666666667 -0.157 0.541051142198359 0.0885957972715226 -0.652053353544673 -2.07235041197951 Q2M3V2 NotFound Q2M3V2.S290.p_NotFound Q2M3V2_S290s _1_1_290_290 Q2M3V2 Q2M3V2 Ankyrin repeat domain-containing protein SOWAHA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30653.30653.4 22.55 22.55 16.674 3 1 1 0 889.7081 3475.8311 S290s TMT10 288 (R) LLsPDAEELPAAPPPSAVPLEPSEHEWLVR (T) LLS(0.99)PDAEELPAAPPPS(0.0)AVPLEPS(0.0)EHEWLVR s:Phosphorylated S SOWAHA 57612.8 2 4 2717.1 72.95 HUMAN 1 -2.6676 -10.5259 RAGSRRGSFDATGSG-p Q15149;S4642-p RAGSRRGSFDATGSG 0.367137725804172 0.104706221180298 0.123666666666667 0.19 8.07658877714702 12.9494231423466 0.123666666666667 0.19 0.155718826528043 0.0507058054489458 1.64844416737733 2.50059162730642 Q15149 PLEC Q15149.S4642.p_PLEC Q15149_S4642s _1_1_4642_4642 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17322.17322.4 25.43 25.43 5.854 14 1 1 0 810.3587 3158.4435 S4642s TMT10 4640 (R) RGsFDATGSGFSMTFSSSSYSSSGYGRR (Y) RGS(0.99)FDAT(0.0)GS(0.0)GFS(0.0)MT(0.0)FS(0.0)S(0.0)S(0.0)S(0.0)Y(0.0)S(0.0)S(0.0)S(0.0)GY(0.0)GRR s:Phosphorylated S PLEC 533778 50 43 44.1 794.85 HUMAN 1 8.0766 12.9494 RAGTRNIYYLCAPNR-p Q12931;Y498-p RAGTRNIYYLCAPNR 0.644663689830828 0.177940770171769 0.071 0.371 3.5674528470972 9.86166304246657 0.071 0.371 0.439799483803946 0.103236600647743 0.833488810468995 1.9569072790655 Q12931 TRAP1 Q12931.Y498.p_TRAP1 Q12931_Y498y _1_1_498_498 Q12931 Q12931|Q12931-2|I3L0K7 Heat shock protein 75 kDa, mitochondrial GG20160819_MSz_CCLE_T4D7_pY_Injection_01.19450.19450.2 14.9 14.9 2.684 2 1 1 0 796.8791 1512.7831 Y498y TMT10 496 (R) NIyYLCAPNR (H) NIY(0.99)Y(0.0)LCAPNR C:Carbamidomethylation,y:Phosphorylated Y TRAP1 80393.8 2 1 241.1 14.9 HUMAN 1 3.5675 9.8617 RAHAAEVSFRDPNCL-p Q5VWN6;S867-p RAHAAEVSFRDPNCL 0.678345896975759 0.0569696457096895 -0.108 -0.37 3.15454604075262 16.5801244465365 -0.108 -0.37 0.483665818270624 0.0219779689428949 -0.751631284175624 -3.17804085552115 Q5VWN6 FAM208B Q5VWN6.S867.p_FAM208B Q5VWN6_S867s _1_1_867_867 Q5VWN6 Q5VWN6 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25962.25962.4 16.22 16.22 99 1 1 1 0 681.6081 2643.4481 S867s TMT10 861 (R) AHAAEVsFRDPNCLLPFIK (T) AHAAEVS(1.0)FRDPNCLLPFIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM208B 271861.7 1 8 275.1 391.61 HUMAN 1 -3.1545 -16.5801 RAHILQRSRNHRTGD-p Q15773;S167-p RAHILQRSRNHRTGD 0.0930004911854097 0.225091353595838 -0.446333333333333 -0.334 21.9532992144666 8.52981053196782 -0.446333333333333 -0.334 0.00637778799285556 0.14028749059267 -4.31125818613438 -1.72638247513163 Q15773 MLF2 Q15773.S167.p_MLF2 Q15773_S167s _1_1_167_167 Q15773 Q15773 Myeloid leukemia factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4747.4747.3 10.48 5.06 99 1 1 1 0 430.5732 1209.7378 S167s TMT10 161 (R) AHILQRsR (N) AHILQRS(1.0)R s:Phosphorylated S MLF2 28204 1 1 3404.1 51.9 HUMAN 1 -21.9533 -8.5298 RAHLRWHSGERPFVC-p Q02447;S646-p RAHLRWHSGERPFVC 0.170325535786342 0.00703916357235774 -0.283666666666667 -0.638 15.3416929819892 30.829655318705 -0.283666666666667 -0.638 0.0292301269665396 0.000826103511342495 -2.94278503879623 -6.67760203901103 Q02447 SP3 Q02447.S646.p_SP3 Q02447_S646s _1_1_646_646 Q02447 Q02447|Q02447-2|Q02447-6|Q02447-5|H0Y6K5 Transcription factor Sp3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21141.21141.4 15.41 15.41 5.665 2 1 1 0 688.8175 2672.2725 S646s TMT10 644 (R) WHsGERPFVCNWMYCGK (R) WHS(0.99)GERPFVCNWMY(0.0)CGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SP3 82494.4 1 3 2016.1 102.15 HUMAN 1 -15.3417 -30.8297 RAHPAYHSFNKKWNL-p Q14746;S375-p RAHPAYHSFNKKWNL 0.139428933956042 0.125070596070441 -0.261666666666667 0.207666666666667 17.5106773908848 11.9057928108818 -0.261666666666667 0.207666666666667 0.0177391277323898 0.0644793601115576 -3.36390393978936 2.31449176459815 Q14746 COG2 Q14746.S375.p_COG2 Q14746_S375s _1_1_375_375 Q14746 Q14746|Q14746-2|B7Z2Y2 Conserved oligomeric Golgi complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7263.7263.4 10.24 10.24 6.076 2 1 1 0 428.2187 1629.8902 S375s TMT10 369 (R) AHPAYHsFNK (K) AHPAY(0.0)HS(0.99)FNK K:TMT10,s:Phosphorylated S COG2 83776.5 1 2 4427.1 31.58 HUMAN 1 -17.5107 11.9058 RAHRSPASPRVPPVP-p Q9Y5U2;S146-p RAHRSPASPRVPPVP 0.338363197273083 0.201393247095545 0.14 -0.135333333333333 8.75515658865019 9.15622407784068 0.14 -0.135333333333333 0.133193901722843 0.121444427583938 1.76598020756704 -1.83473691099044 Q9Y5U2 TSSC4 Q9Y5U2.S146.p_TSSC4 Q9Y5U2_S146s _1_1_146_146 Q9Y5U2 Q9Y5U2|Q9Y5U2-2|A6NCC9 Protein TSSC4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14728.14728.4 18.14 18.14 1.323 3 1 1 0 595.8062 2300.2349 S146s TMT10 143 (R) SPAsPRVPPVPDYVAHPER (W) S(0.0)PAS(0.99)PRVPPVPDY(0.0)VAHPER s:Phosphorylated S TSSC4 34496.1 6 2 2724.1 72.68 HUMAN 1 8.7552 -9.1562 RAIMEMPSFYSHGLP-p P55265-4;S524-p RAIMEMPSFYSHGLP 0.342075757494071 0.0799587703347656 0.143 -0.261333333333333 8.65495991252818 14.559870881824 0.143 -0.261333333333333 0.136302558753224 0.0349955571248358 1.74863542888701 -2.79454663504609 P55265 ADAR P55265.4.S524.p_ADAR P55265-4_S524s _1_1_524_524 P55265-4 P55265-4|P55265-2 Isoform 4 of Double-stranded RNA-specific adenosine deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25154.25154.3 16.83 16.83 2.841 3 1 1 0 682.3251 1964.9924 S524s TMT10 518 (R) AIMEMPsFYSHGLPR (C) AIMEMPS(0.99)FY(0.0)S(0.0)HGLPR s:Phosphorylated S ADAR 142147.5 2 7 584.1 265.43 HUMAN 1 8.655 -14.5599 RAIRDAKTPDKMKKS-p P46940;T1434-p RAIRDAKTPDKMKKS 0.51428507339171 0.462152309570241 0.0903333333333333 -0.085 5.33200980541666 4.47091894690597 0.0903333333333333 -0.085 0.29295372155096 0.357197248880042 1.16456756138214 -1.00595654932226 P46940 IQGAP1 P46940.T1434.p_IQGAP1 P46940_T1434t _1_1_1434_1434 P46940 P46940|H0YLE8 Ras GTPase-activating-like protein IQGAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7278.7278.4 9.07 5.6 99 1 1 1 0 471.2748 1802.1103 T1434t TMT10 1428 (R) AIRDAKtPDK (M) AIRDAKT(1.0)PDK K:TMT10,t:Phosphorylated T IQGAP1 189876.1 12 8 1386.1 147.7 HUMAN 1 5.332 -4.4709 RAISTPETPLTKRSV-p Q14181;T130-p RAISTPETPLTKRSV 0.341244205876587 0.0140331145277623 0.186666666666667 -0.652 8.67948696544664 25.7016341555244 0.186666666666667 -0.652 0.135534951110687 0.00269052222853223 1.75288137711591 -5.21695149852683 Q14181 POLA2 Q14181.T130.p_POLA2 Q14181_T127tT130t_2_2_127_130 Q14181 Q14181 DNA polymerase alpha subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16924.16924.2 7.48 7.48 1.173 4 2 2 0 888.4504 1615.9671 T127t T130t TMT10 124 (R) AIStPEtPLTK (R) AIS(0.0)T(0.99)PET(0.99)PLT(0.0)K K:TMT10,t:Phosphorylated T POLA2 66802.4 3 6 2066.1 99.64 HUMAN 1 8.6795 -25.7016 RAKALDQSDNDMSAV-p Q49A26;S540-p RAKALDQSDNDMSAV 0.706123032840062 0.213144047955284 -0.0523333333333333 -0.191 2.84310472333044 8.8313009365716 -0.0523333333333333 -0.191 0.519624389977845 0.130878981403964 -0.688360869738397 -1.7785340202471 Q49A26 GLYR1 Q49A26.S540.p_GLYR1 Q49A26_S540s _1_1_540_540 Q49A26 Q49A26|Q49A26-3|Q49A26-2|Q49A26-4|Q49A26-5 Putative oxidoreductase GLYR1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15481.15481.3 13.86 13.86 5.595 3 1 1 0 631.9468 1813.8588 S540s TMT10 536 (K) ALDQsDNDMSAVYR (A) ALDQS(0.99)DNDMS(0.0)AVY(0.0)R s:Phosphorylated S GLYR1 61125.9 2 7 2303.1 88.97 HUMAN 1 -2.8431 -8.8313 RAKDQNESLDEEMFY-p Q96AC1-3;S673-p RAKDQNESLDEEMFY 0.383617908533383 0.0453978073189889 -0.122666666666667 -0.410333333333333 7.7029994113704 17.9704974307015 -0.122666666666667 -0.410333333333333 0.169707118240498 0.0159569636945433 -1.58359262327634 -3.45347557713343 Q96AC1 FERMT2 Q96AC1.3.S673.p_FERMT2 Q96AC1-3_S673s _1_1_673_673 Q96AC1-3 Q96AC1-3 Isoform 3 of Fermitin family homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19198.19198.3 16.89 16.89 6.327 2 1 1 0 872.0965 2534.3052 S673s TMT10 667 (R) AKDQNEsLDEEMFYK (L) AKDQNES(0.99)LDEEMFY(0.0)K K:TMT10,s:Phosphorylated S FERMT2 79301.6 4 9 1095.1 178.25 HUMAN 1 -7.703 -17.9705 RAKESRCSCAEALLS-p O60503;S582-p RAKESRCSCAEALLS 0.812940652592886 0.617790133956042 0.05 -0.051 1.72947554336238 2.84371395821171 0.05 -0.051 0.671509939975449 0.51955150139347 0.448022561748043 -0.688392287727846 O60503 ADCY9 O60503.S582.p_ADCY9 O60503_S582s _1_1_582_582 O60503 O60503 Adenylate cyclase type 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33628.33628.3 14.68 14.26 14.263 5 1 1 0 945.7676 2755.3228 S582s TMT10 581 (R) CsCAEALLSGFEVIDGSQVSSGPR (G) CS(0.99)CAEALLS(0.0)GFEVIDGS(0.0)QVS(0.0)S(0.0)GPR C:Carbamidomethylation,s:Phosphorylated S ADCY9 152923.1 3 5 658.1 252.1 HUMAN 1 1.7295 -2.8437 RAKGAQASPPPIAPY-p Q14164;S664-p RAKGAQASPPPIAPY 0.148266672319898 0.111006147983383 -0.248666666666667 -0.190666666666667 16.7664809337105 12.6020681030477 -0.248666666666667 -0.190666666666667 0.0210548381166269 0.0549279245712442 -3.21678163253567 -2.43831371213874 Q14164 IKBKE Q14164.S664.p_IKBKE Q14164_S664s _1_1_664_664 Q14164 Q14164|Q14164-2 Inhibitor of nuclear factor kappa-B kinase subunit epsilon HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14619.14619.3 17.36 17.36 9.571 4 1 1 0 791.7635 2293.3069 S664s TMT10 660 (K) GAQAsPPPIAPYPSPTRK (D) GAQAS(0.99)PPPIAPY(0.0)PS(0.0)PT(0.0)RK K:TMT10,s:Phosphorylated S IKBKE 81202.6 2 1 5227.1 21.54 HUMAN 1 -16.7665 -12.6021 RAKGNGSSQPGTARR-p Q9UL25;S196-p RAKGNGSSQPGTARR 0.049158581421578 0.746421939727936 0.738666666666667 -0.036 28.9755901385294 1.75353242636145 0.738666666666667 -0.036 0.00126602122326498 0.667800526874659 6.12639903897513 -0.453450403598435 Q9UL25 RAB21 Q9UL25.S196.p_RAB21 Q9UL25_S196s _1_1_196_196 Q9UL25 Q9UL25 Ras-related protein Rab-21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.3823.3823.3 9.49 4.71 1.323 3 1 1 0 590.308 1688.9444 S196s TMT10 190 (R) AKGNGSsQPGTAR (R) AKGNGS(0.0)S(0.99)QPGT(0.0)AR K:TMT10,s:Phosphorylated S RAB21 24746.5 2 1 6789.1 9.49 HUMAN 1 28.9756 -1.7535 RAKSAIESDVDFWDK-p B4E0T2;S304-p RAKSAIESDVDFWDK 0.0897340370396671 0.0786593056943741 -0.701333333333333 -0.354 22.2972570980956 14.6588308421036 -0.701333333333334 -0.354 0.00589215672638959 0.0342071518698337 -4.39023743801376 -2.8129215929441 B4E0T2 PEX5 B4E0T2.S304.p_PEX5 B4E0T2_S304s _1_1_304_304 B4E0T2 B4E0T2|P50542-4|P50542-2 Peroxisomal targeting signal 1 receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25025.25025.3 17.18 12.02 1.11 2 1 1 0 793.4155 2298.2585 S304s TMT10 298 (R) AKSAIEsDVDFWDK (L) AKS(0.0)AIES(0.99)DVDFWDK K:TMT10,s:Phosphorylated S PEX5 73580.7 1 2 4613.1 28.81 HUMAN 1 -22.2973 -14.6588 RAKVVSQSQPGSRSS-p Q7Z460-4;S687-p RAKVVSQSQPGSRSS 0.42112581067315 0.469730436815983 0.150666666666667 -0.0716666666666666 6.91882628518336 4.37377459171779 0.150666666666667 -0.0716666666666667 0.203290634554728 0.365277179574462 1.44679656935176 -0.987757025452732 Q7Z460 CLASP1 Q7Z460.4.S687.p_CLASP1 Q7Z460-4_S687s _1_1_687_687 Q7Z460-4 Q7Z460-4 Isoform 4 of CLIP-associating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6245.6245.3 13.07 13.07 2.536 3 1 1 0 594.661 1702.0012 S687s TMT10 681 (R) AKVVSQsQPGSR (S) AKVVS(0.0)QS(0.99)QPGS(0.0)R K:TMT10,s:Phosphorylated S CLASP1 164028.5 3 42 158.3 498.15 HUMAN 1 6.9188 -4.3738 RALAAVPSAGSVQRV-p A0A0G2JPP5;S1276-p RALAAVPSAGSVQRV 0.297852699853076 0.222428152242474 0.146666666666667 -0.269333333333333 9.89177848506882 8.59690642286216 0.146666666666667 -0.269333333333333 0.102523199616538 0.138136789360714 1.96291467226356 -1.73799031973896 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1276.p_SCRIB A0A0G2JPP5_S1276s _1_1_1276_1276 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14643.14643.3 8.18 8.18 2.194 2 1 1 0 512.6102 1455.8481 S1276s TMT10 1270 (R) ALAAVPsAGSVQR (V) ALAAVPS(0.99)AGS(0.0)VQR s:Phosphorylated S SCRIB 178690.9 3 27 22.1 1004.81 HUMAN 1 9.8918 -8.5969 RALERRISEMEEELK-p O14974;S995-p RALERRISEMEEELK 0.0312283974748222 0.00575422933881225 -0.780333333333333 -0.494666666666667 35.1888429587313 32.4216766373495 -0.780333333333333 -0.494666666666667 0.000302771996156524 0.000572574940020453 -8.1799646445734 -7.19150034329104 O14974 PPP1R12A O14974.S995.p_PPP1R12A O14974_S995s _1_1_995_995 O14974 O14974|O14974-2|O14974-3|O14974-4|O14974-5 Protein phosphatase 1 regulatory subunit 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18865.18865.2 10.04 6.21 99 1 1 1 0 901.462 1721.9508 S995s TMT10 993 (R) RIsEMEEELK (M) RIS(1.0)EMEEELK K:TMT10,s:Phosphorylated S PPP1R12A 115678 3 14 286.1 385.3 HUMAN 1 -35.1888 -32.4217 RALGNQKSTVVEFSN-p P15822;S2033-p RALGNQKSTVVEFSN 0.137689822550301 0.483558395864161 0.285333333333333 -0.0763333333333333 17.6260075861708 4.21182819644275 0.285333333333333 -0.0763333333333333 0.0172742516223851 0.379155342980426 3.3869680076201 -0.957241812986287 P15822 HIVEP1 P15822.S2033.p_HIVEP1 P15822_S2033s _1_1_2033_2033 P15822 P15822|F5H212|P15822-3|P15822-2 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16795.16795.2 14.17 14.17 1.13 3 1 1 0 774.9077 1468.8412 S2033s TMT10 2033 (K) sTVVEFSNK (D) S(0.99)T(0.0)VVEFS(0.0)NK K:TMT10,s:Phosphorylated S HIVEP1 299483.8 5 30 82.1 631.69 HUMAN 1 17.626 -4.2118 RALGRRKSQEALHEQ-p Q9NVE5-3;S1211-p RALGRRKSQEALHEQ 0.278656842374099 0.0149864805576079 0.200666666666667 0.405 10.4917308037843 25.2515410069808 0.200666666666667 0.405 0.0892949543576456 0.00298432350360622 2.06728565060871 5.1013170404824 Q9NVE5 USP40 Q9NVE5.3.S1211.p_USP40 Q9NVE5-3_S1211s _1_1_1211_1211 Q9NVE5-3 Q9NVE5-3 Isoform 3 of Ubiquitin carboxyl-terminal hydrolase 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10896.10896.5 21.73 21.73 10.946 7 1 1 0 676.7565 3299.7861 S1211s TMT10 1209 (R) RKsQEALHEQSSYILSSAETPARPR (A) RKS(0.99)QEALHEQS(0.0)S(0.0)Y(0.0)ILS(0.0)S(0.0)AET(0.0)PARPR K:TMT10,s:Phosphorylated S USP40 143153.3 3 2 4191.1 35.62 HUMAN 1 10.4917 25.2515 RALHRTLSDESIYNS-p O43166;S1585-p RALHRTLSDESIYNS 0.733645174784926 0.946207902390305 0.0523333333333333 0.01 2.54674081211662 0.343614171025344 0.0523333333333333 0.01 0.556321595390446 0.923928966115068 0.626744625070026 0.100011664331535 O43166 SIPA1L1 O43166.S1585.p_SIPA1L1 O43166_S1585s _1_1_1585_1585 O43166 O43166|O43166-2|O43166-3|F5GYF8 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12998.12998.2 14.9 8.5 2.524 5 1 1 0 861.4013 1641.8281 S1585s TMT10 1583 (R) TLsDESIYNSQR (E) T(0.0)LS(0.99)DES(0.0)IY(0.0)NS(0.0)QR s:Phosphorylated S SIPA1L1 201223.1 5 27 46.1 777.88 HUMAN 1 2.5467 0.3436 RALKRAGSPEVQGAM-p O43593;S416-p RALKRAGSPEVQGAM 0.654693555400243 0.245240780802487 0.0706666666666667 0.169666666666667 3.4474842328392 8.04384380061251 0.0706666666666667 0.169666666666667 0.452117769866114 0.156897354166908 0.809923894037111 1.64224197176749 O43593 HR O43593.S416.p_HR O43593_S416s_1_1_416_416 O43593 O43593|O43593-2 Lysine-specific demethylase hairless HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6704.6704.3 14.65 14.65 7.179 2 1 1 0 732.0388 2098.1479 S416s M423m TMT10 413 (K) RAGsPEVQGAmGSPAPK (R) RAGS(0.99)PEVQGAM(1.0)GS(0.0)PAPK K:TMT10,s:Phosphorylated S,m:Oxidized methionine HR 130059.7 3 3 3078.1 61.36 HUMAN 1 3.4475 8.0438 RALLRRESEVLDLKE-p O95613;S1653-p RALLRRESEVLDLKE 0.466272747529073 0.395493367077361 0.0983333333333333 0.0833333333333333 6.11745574024251 5.35635630543221 0.0983333333333334 0.0833333333333333 0.244486242522161 0.29131602102338 1.30546044565835 1.16872911645404 O95613 PCNT O95613.S1653.p_PCNT O95613_S1653s _1_1_1653_1653 O95613 O95613|O95613-2 Pericentrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21825.21825.4 15.65 15.65 99 1 1 1 0 621.5987 2403.4062 S1653s TMT10 1651 (R) REsEVLDLKEQLEK (M) RES(1.0)EVLDLKEQLEK K:TMT10,s:Phosphorylated S PCNT 380826.2 6 9 222.1 428 HUMAN 1 6.1175 5.3564 RALLSLRSPKARRGK-p Q9UNF1;S247-p RALLSLRSPKARRGK 0.355077167170123 0.00230842523947764 -0.16 -0.920333333333333 8.35464489127579 40.6146572328206 -0.16 -0.920333333333333 0.146061417431414 8.68029083836221e-05 -1.69663301964125 -10.4113141429785 Q9UNF1 MAGED2 Q9UNF1.S247.p_MAGED2 Q9UNF1_S247s _1_1_247_247 Q9UNF1 Q9UNF1|Q9UNF1-2|Q5H909 Melanoma-associated antigen D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13223.13223.2 11.71 7.26 1.578 2 1 1 0 647.3782 1213.783 S247s Hydrogen 241 (R) ALLSLRsPK (A) ALLS(0.0)LRS(0.99)PK K:TMT10-Lys-Only,s:Phosphorylated S MAGED2 65124.3 12 11 893.1 204.33 HUMAN 1 -8.3546 -40.6147 RALQAPHSPSKTDGK-p Q96AQ6;S43-p RALQAPHSPSKTDGK 0.0787840769166688 0.0100440102268495 -0.532666666666667 -0.41 23.546615722089 28.0746915842045 -0.532666666666667 -0.41 0.0044191467910981 0.00155786866350942 -4.6848489028419 -5.85855878881286 Q96AQ6 PBXIP1 Q96AQ6.S43.p_PBXIP1 Q96AQ6_S43s _1_1_43_43 Q96AQ6 Q96AQ6|Q96AQ6-2|Q96AQ6-3|Q5T173|F2Z2Z8 Pre-B-cell leukemia transcription factor-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8268.8268.3 14.37 10.87 2.432 2 1 1 0 525.2894 1493.884 S43s TMT10 37 (R) ALQAPHsPSK (T) ALQAPHS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S PBXIP1 81098.2 11 2 3062.1 61.72 HUMAN 1 -23.5466 -28.0747 RALQASVSPPSPSPN-p O43189;S417-p RALQASVSPPSPSPN 0.232968889504652 0.840658246291623 0.187333333333333 0.023 12.1622444496327 1.05965153166036 0.187333333333333 0.023 0.0607820796102766 0.783492505959503 2.36114568834032 0.288746499478396 O43189 PHF1 O43189.S417.p_PHF1 O43189_S417s _1_1_417_417 O43189 O43189 PHD finger protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17459.17459.4 13.92 13.92 1.324 10 1 1 0 894.6743 3495.709 S417s TMT10 411 (R) ALQASVsPPSPSPNQSYQGSSGYNFRPTDAR (C) ALQAS(0.0)VS(0.99)PPS(0.0)PS(0.0)PNQS(0.0)Y(0.0)QGS(0.0)S(0.0)GY(0.0)NFRPT(0.0)DAR s:Phosphorylated S PHF1 63416.9 1 2 2838.1 68.46 HUMAN 1 12.1622 1.0597 RALQYEQTLMYGRYT-p P51788;T20-p RALQYEQTLMYGRYT 0.10854647135141 0.0507464615862734 0.435666666666667 0.725333333333333 20.2213984225296 17.2914186171739 0.435666666666667 0.725333333333333 0.00950298749436406 0.0186577013994017 3.92662677616013 3.3176720086107 P51788 CLCN2 P51788.T20.p_CLCN2 P51788_T20t _1_1_20_20 P51788 P51788|P51788-3|P51788-5|P51788-4|A0A1B0GV52 Chloride channel protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19189.19189.2 16.29 16.29 8.325 3 1 1 0 891.4308 1701.8832 T20t TMT10 14 (R) ALQYEQtLMYGR (Y) ALQY(0.0)EQT(0.99)LMY(0.0)GR t:Phosphorylated T CLCN2 99503.6 1 1 1767.1 116.44 HUMAN 1 20.2214 17.2914 RALRASYTPSPARST-p Q96DF8;T419-p RALRASYTPSPARST 0.8567877084659 0.404856558300224 -0.0326666666666667 0.122666666666667 1.30689338697016 5.22599938582582 -0.0326666666666667 0.122666666666667 0.740134521793945 0.300192654677061 -0.349181524430256 1.14507663321456 Q96DF8 DGCR14 Q96DF8.T419.p_DGCR14 Q96DF8_T419tS421s_2_2_419_421 Q96DF8 Q96DF8 Protein DGCR14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7722.7722.2 8.04 8.04 1.979 4 2 2 0 669.7884 1178.6367 T419t S421s TMT10 416 (R) ASYtPsPAR (S) AS(0.0)Y(0.0)T(0.99)PS(0.99)PAR t:Phosphorylated T,s:Phosphorylated S DGCR14 52624.2 1 12 924.1 199.86 HUMAN 1 -1.3069 5.226 RALSGRASPVPAPSS-p Q9P206-3;S873-p RALSGRASPVPAPSS 0.610247631511631 0.626615106167606 0.124333333333333 0.0486666666666667 3.9736950949353 2.76067460955266 0.124333333333333 0.0486666666666667 0.400525794433795 0.529581175227537 0.912098064390055 0.671278818842888 Q9P206 KIAA1522 Q9P206.3.S873.p_KIAA1522 Q9P206-3_S873s _1_1_873_873 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11309.11309.4 23.95 23.95 1.285 4 1 1 0 578.3126 2230.2618 S873s TMT10 867 (R) ALSGRAsPVPAPSSGLHAAVR (L) ALS(0.0)GRAS(0.99)PVPAPS(0.0)S(0.0)GLHAAVR s:Phosphorylated S KIAA1522 108782.6 7 33 62.1 704.36 HUMAN 1 3.9737 2.7607 RALSRQLSSGVSEIR-p P04792;S82-p RALSRQLSSGVSEIR 0.500999728676766 0.108503888052893 0.0986666666666667 0.169333333333333 5.53329375056834 12.7436636526962 0.0986666666666667 0.169333333333333 0.279685933751976 0.0531659568827151 1.20095166661536 2.46365749411154 P04792 HSPB1 P04792.S82.p_HSPB1 P04792_S82s _1_1_82_82 P04792 P04792|F8WE04 Heat shock protein beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13311.13311.2 12.9 6.2 1.156 3 1 1 0 692.8555 1304.7371 S82s TMT10 80 (R) QLsSGVSEIR (H) QLS(0.99)S(0.0)GVS(0.0)EIR s:Phosphorylated S HSPB1 22839.1 28 7 357.1 346.69 HUMAN 1 5.5333 12.7437 RALTGRDSGMEKYGS-p O95425-2;S535-p RALTGRDSGMEKYGS 0.428106595253249 0.00405999016919278 0.334333333333333 -0.635333333333333 6.78350852838125 35.2227895879802 0.334333333333333 -0.635333333333334 0.209724490093063 0.000300414604054466 1.42306173284518 -8.1765929069239 O95425 SVIL O95425.2.S535.p_SVIL O95425-2_S535s _1_1_535_535 O95425-2 O95425|O95425-3|O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8933.8933.3 8.37 8.37 2.359 2 1 1 0 568.2924 1622.8936 S535s TMT10 529 (R) ALTGRDsGMEK (Y) ALT(0.0)GRDS(0.99)GMEK K:TMT10,s:Phosphorylated S SVIL 202384.1 1 16 406.2 324.74 HUMAN 1 6.7835 -35.2228 RALVEFESNPEETRE-p Q9H6F5;S37-p RALVEFESNPEETRE 0.183383326299768 0.0133262814067011 0.237 -1.044 14.4839226852036 26.0815495222679 0.237 -1.044 0.0356129320839305 0.00246515963430798 2.78220912790355 -5.3160071391298 Q9H6F5 CCDC86 Q9H6F5.S37.p_CCDC86 Q9H6F5_S37s _1_1_37_37 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14519.14519.4 10.89 10.89 1.211 4 1 1 0 659.5571 2555.2372 S37s Hydrogen 31 (R) ALVEFEsNPEETREPGSPPSVQR (A) ALVEFES(0.99)NPEET(0.0)REPGS(0.0)PPS(0.0)VQR s:Phosphorylated S CCDC86 40349 5 3 346.1 352.36 HUMAN 1 14.4839 -26.0815 RALVHQLSNESRLSI-p Q9H4L5-2;S406-p RALVHQLSNESRLSI 0.421140316027267 0.987660257182692 0.130666666666667 0.00200000000000004 6.91636967652804 0.0816288977361009 0.130666666666667 0.00200000000000003 0.203405659457294 0.981379790255424 1.44636608077709 0.024434908574333 Q9H4L5 OSBPL3 Q9H4L5.2.S406.p_OSBPL3 Q9H4L5-2_S406s _1_1_406_406 Q9H4L5-2 Q9H4L5|Q9H4L5-2|Q9H4L5-3|Q9H4L5-4|Q9H4L5-5|Q9H4L5-6|Q9H4L5-7|Q9H4L5-8 Isoform 1b of Oxysterol-binding protein-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9345.9345.2 15.12 11.2 2.902 2 1 1 0 781.8982 1482.8226 S406s TMT10 400 (R) ALVHQLsNESR (L) ALVHQLS(0.99)NES(0.0)R s:Phosphorylated S OSBPL3 98654.8 4 13 683.1 244.57 HUMAN 1 6.9164 0.0816 RALVRAHSEKDQPPF-p Q14676;S485-p RALVRAHSEKDQPPF 0.761458213847895 0.05954831879488 0.0506666666666667 -0.237 2.26944927230225 16.3236888396329 0.0506666666666667 -0.237 0.593000518053018 0.0233147689551055 0.567679894097631 -3.12832514419836 Q14676 MDC1 Q14676.S485.p_MDC1 Q14676_S485s _1_1_485_485 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13855.13855.5 16.22 10.92 15.136 5 1 1 0 804.3904 3937.9771 S485s TMT10 483 (R) AHsEKDQPPFGDSDDSVEADKSSPGIHLER (S) AHS(0.99)EKDQPPFGDS(0.0)DDS(0.0)VEADKS(0.0)S(0.0)PGIHLER K:TMT10,s:Phosphorylated S MDC1 227803.2 2 14 6.1 1662.62 HUMAN 1 2.2694 -16.3237 RALWGARSPKRPRLQ-p Q9BWN1;S29-p RALWGARSPKRPRLQ 0.325132815571161 0.000952253650599092 -0.257333333333333 -1.512 9.13956120696073 53.6336915494167 -0.257333333333333 -1.51548832812465 0.121911276677419 4.33142546082576e-06 -1.83252438954718 -18.3566814752016 Q9BWN1 PRR14 Q9BWN1.S29.p_PRR14 Q9BWN1_S29s _1_1_29_29 Q9BWN1 Q9BWN1 Proline-rich protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13433.13433.2 10.8 10.8 99 1 1 1 0 762.4287 1443.8836 S29s TMT10 23 (R) ALWGARsPK (R) ALWGARS(1.0)PK K:TMT10,s:Phosphorylated S PRR14 64726.7 2 2 874.1 209.43 HUMAN 1 -9.1396 -53.6337 RAMLRRHSLIGPDIK-p F5H1U9;S1078-p RAMLRRHSLIGPDIK 0.318913492023343 0.0191485533380821 -0.162666666666667 0.432666666666667 9.28899728775961 23.6199336681906 -0.162666666666667 0.432666666666667 0.117787789414081 0.00434516860698324 -1.85840197120965 4.6970823173733 F5H1U9 NotFound F5H1U9.S1078.p_NotFound F5H1U9_S1078s _1_1_1078_1078 F5H1U9 F5H1U9|O75970|O75970-2|O75970-3|O75970-5 Multiple PDZ domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10839.10839.3 10.1 7.63 99 1 1 1 0 558.6549 1593.9841 S1078s TMT10 1076 (R) RHsLIGPDIK (F) RHS(1.0)LIGPDIK K:TMT10,s:Phosphorylated S MPDZ 224434.7 1 5 1525.1 134.07 HUMAN 1 -9.289 23.6199 RAMSTSQSPTRSQKG-p Q15776;S193-p RAMSTSQSPTRSQKG 0.726935837841591 0.0107297167154974 0.0493333333333333 0.406666666666667 2.62699224975885 27.6131751994395 0.0493333333333333 0.406666666666667 0.546135962116687 0.00173253684798837 0.643575652453339 5.72939569912774 Q15776 ZKSCAN8 Q15776.S193.p_ZKSCAN8 Q15776_S193s _1_1_193_193 Q15776 Q15776 Zinc finger protein with KRAB and SCAN domains 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4572.4572.2 8.3 8.3 2.297 5 1 1 0 687.8177 1294.6623 S193s TMT10 187 (R) AMSTSQsPTR (S) AMS(0.0)T(0.0)S(0.0)QS(0.99)PT(0.0)R s:Phosphorylated S ZKSCAN8 67012.8 2 64 240.26 415.72 HUMAN 1 2.627 27.6132 RANPTTGSVEWLEED-p Q9NVM4;S14-p RANPTTGSVEWLEED 0.861280679047171 0.103521516153491 0.0393333333333333 0.326 1.26705818887088 13.0107656706318 0.0393333333333333 0.326 0.746954556953276 0.0499946385569931 0.339587819219158 2.51162762269739 Q9NVM4 PRMT7 Q9NVM4.S14.p_PRMT7 Q9NVM4_S14s _1_1_14_14 Q9NVM4 Q9NVM4|Q9NVM4-3|Q9NVM4-4 Protein arginine N-methyltransferase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18603.18603.4 9.27 9.27 1.35 5 1 1 0 825.3703 3218.4864 S14s TMT10 8 (R) ANPTTGsVEWLEEDEHYDYHQEIAR (S) ANPT(0.0)T(0.0)GS(0.99)VEWLEEDEHY(0.0)DY(0.0)HQEIAR s:Phosphorylated S PRMT7 79713 1 1 6822.1 9.27 HUMAN 1 1.2671 13.0108 RANRDQDSSDDERAL-p Q5TAQ9;S129-p RANRDQDSSDDERAL 0.666610889058688 0.0727841803049565 0.0623333333333333 0.216333333333333 3.29236439008054 15.1198861423551 0.0623333333333333 0.216333333333333 0.468558219789421 0.0307617746087935 0.779194203621391 2.89905597732474 Q5TAQ9 DCAF8 Q5TAQ9.S129.p_DCAF8 Q5TAQ9_S129sS130s_2_2_129_130 Q5TAQ9 G3V3G9|Q5TAQ9|V9GY54|Q5TAQ9-2 DDB1- and CUL4-associated factor 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25910.25910.4 22.4 20.97 21.299 6 2 2 0 866.3729 3302.5268 S129s S130s Hydrogen 123 (R) ANRDQDssDDERALEDWVSSETSALPRPR (W) ANRDQDS(0.99)S(0.99)DDERALEDWVS(0.0)S(0.0)ET(0.0)S(0.0)ALPRPR s:Phosphorylated S DCAF8 67535.7 16 3 1532.1 133.65 HUMAN 1 3.2924 15.1199 RANSFVGTAQYVSPE-p O15530;T245-p RANSFVGTAQYVSPE 0.758803098663587 0.0343780653308177 0.0566666666666667 0.304666666666667 2.29723726334646 19.7235629057495 0.0566666666666667 0.304666666666667 0.589218363663656 0.0106572145594599 0.57366561186007 3.81636526109242 O15530 PDPK1 O15530.T245.p_PDPK1 O15530_S241sT245t_2_2_241_245 O15530 O15530|E9PER6|O15530-2 3-phosphoinositide-dependent protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32276.32276.3 9.03 7.51 1.355 5 2 2 0 815.3853 2283.207 N240n S241s T245t Hydrogen 239 (R) AnsFVGtAQYVSPELLTEK (S) AN(1.0)S(0.99)FVGT(0.99)AQY(0.0)VS(0.0)PELLT(0.0)EK K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S,t:Phosphorylated T PDPK1 63664.2 1 5 2897.1 66.6 HUMAN 1 2.2972 19.7236 RAPAAGESLSGTRES-p Q9BXI6;S18-p RAPAAGESLSGTRES 0.698184520976541 0.476195937885963 0.0556666666666666 0.115666666666667 2.9323602321924 4.29786632598986 0.0556666666666666 0.115666666666667 0.509054143498292 0.371717807937368 0.706640094521104 0.973481742701298 Q9BXI6 TBC1D10A Q9BXI6.S18.p_TBC1D10A Q9BXI6_S18s _1_1_18_18 Q9BXI6 Q9BXI6-2|F8WDN6 TBC1 domain family member 10A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7960.7960.2 12.6 8.09 1.118 3 1 1 0 713.3523 1345.7273 S18s TMT10 12 (R) APAAGEsLSGTR (E) APAAGES(0.99)LS(0.0)GT(0.0)R s:Phosphorylated S TBC1D10A 57630.1 2 1 1460.1 140.31 HUMAN 1 2.9324 4.2979 RAPEPQLSPGSDASE-p Q8TE68;S631-p RAPEPQLSPGSDASE 0.67705106710214 0.152022468714386 0.0983333333333333 -0.156666666666667 3.17118827287471 10.7577430125627 0.0983333333333333 -0.156666666666667 0.481815949955003 0.0839896359331857 0.754973171379162 -2.11279159929434 Q8TE68 EPS8L1 Q8TE68.S631.p_EPS8L1 Q8TE68_S631s _1_1_631_631 Q8TE68 Q8TE68|B4DKV7|Q8TE68-2|Q8TE68-4|K7ELW3 Epidermal growth factor receptor kinase substrate 8-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13171.13171.3 16.8 16.8 4.795 3 1 1 0 650.3104 1868.9551 S631s TMT10 625 (R) APEPQLsPGSDASEVR (A) APEPQLS(0.99)PGS(0.0)DAS(0.0)EVR s:Phosphorylated S EPS8L1 80534.9 5 13 326.1 361.27 HUMAN 1 3.1712 -10.7577 RAPGPRDTDDDEEEP-p J3KQR7;T1305-p RAPGPRDTDDDEEEP 0.271002123051664 0.195015392953895 0.173333333333333 0.13 10.7464337541888 9.33391408516591 0.173333333333333 0.13 0.0842086344125272 0.116575850197251 2.11174361894502 1.86548340227086 J3KQR7 NotFound J3KQR7.T1305.p_NotFound J3KQR7_T1305t _1_1_1305_1305 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34797.34797.5 25.84 25.84 11.201 3 1 1 0 745.9489 3645.7394 T1305t TMT10 1299 (R) APGPRDtDDDEEEPDPYGFIVQTAEIAEIAR (L) APGPRDT(0.99)DDDEEEPDPY(0.0)GFIVQT(0.0)AEIAEIAR t:Phosphorylated T CEP170B 172326.6 5 32 51.1 746.11 HUMAN 1 10.7464 9.3339 RAPKPSRSLSGSLCA-p E7ERK9;S19-p RAPKPSRSLSGSLCA 0.148266672319898 0.0398548575294297 -0.296 0.267666666666667 16.7558375707039 18.7673037196356 -0.296 0.267666666666667 0.0211065010125761 0.0132821881516365 -3.21469837224794 3.61613119707558 E7ERK9 NotFound E7ERK9.S19.p_NotFound E7ERK9_S19s _1_1_19_19 E7ERK9 E7ERK9|Q9UI10-2 Translation initiation factor eIF-2B subunit delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.34022.34022.3 20.3 20.3 1.41 6 1 1 0 843.397 2448.2151 S19s TMT10 19 (R) sLSGSLCALFSDADSGSGMK (A) S(0.99)LS(0.0)GS(0.0)LCALFS(0.0)DADS(0.0)GS(0.0)GMK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EIF2B4 60284.1 2 1 2532.1 79.61 HUMAN 1 -16.7558 18.7673 RAPQTLPSPEADALA-p P31274;S159-p RAPQTLPSPEADALA 0.260386657049657 0.00680347210262704 0.197666666666667 0.475333333333333 11.084981586558 31.1041305684236 0.197666666666667 0.475333333333333 0.0778936117120305 0.000775509180119667 2.17100411301509 6.7639755475733 P31274 HOXC9 P31274.S159.p_HOXC9 P31274_S159s _1_1_159_159 P31274 P31274 Homeobox protein Hox-C9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16233.16233.3 17.06 17.06 7.213 3 1 1 0 821.4296 2382.3029 S159s TMT10 151 (R) DRAPQTLPsPEADALAGSK (H) DRAPQT(0.0)LPS(0.99)PEADALAGS(0.0)K K:TMT10,s:Phosphorylated S HOXC9 29475.7 4 2 3583.1 47.71 HUMAN 1 11.085 31.1041 RAPQTSSSPPPVRRG-p A9Z1X7;S705-p RAPQTSSSPPPVRRG 0.418812636084541 0.283969421009169 0.113333333333333 0.18 6.97694815299222 7.20854097560952 0.113333333333333 0.18 0.20058810924322 0.190171705975261 1.45697750258392 1.49704407449095 A9Z1X7 NotFound A9Z1X7.S705.p_NotFound A9Z1X7_S705s _1_1_705_705 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4504.4504.2 7.13 2.78 1.179 4 1 1 0 844.9377 1608.9019 S705s TMT10 699 (R) APQTSSsPPPVRR (G) APQT(0.0)S(0.0)S(0.0)S(0.99)PPPVRR s:Phosphorylated S SRRM1 103445.7 36 39 8.1 1346.57 HUMAN 1 6.9769 7.2085 RAPSEAESFALEVQD-p Q8IY42;S171-p RAPSEAESFALEVQD 0.340727355898959 0.0974065926971028 0.153666666666667 -0.212666666666667 8.69507925496425 13.3738112767676 0.153666666666667 -0.212666666666667 0.135049218232287 0.0459852839300817 1.75558055067141 -2.57718607339401 Q8IY42 C4orf19 Q8IY42.S171.p_C4orf19 Q8IY42_S167sS171s_2_2_167_171 Q8IY42 Q8IY42 Uncharacterized protein C4orf19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32297.32297.5 28.18 24.16 12.493 3 2 2 0 970.2413 4687.2327 S167s S171s Hydrogen 165 (R) APsEAEsFALEVQDHVFQIPAPDYLQHWGPAGDNVDHNEK (D) APS(0.99)EAES(0.99)FALEVQDHVFQIPAPDY(0.0)LQHWGPAGDNVDHNEK K:TMT10-Lys-Only,s:Phosphorylated S C4orf19 34254.4 2 10 703.1 239.48 HUMAN 1 8.6951 -13.3738 RAPSPVVSPTEMNKE-p Q9UPX8-3;S1713-p RAPSPVVSPTEMNKE 0.0948633510902073 0.507348690615714 -0.438666666666667 -0.0623333333333333 21.7155561565613 3.94896309095572 -0.438666666666667 -0.0623333333333333 0.00673665620474872 0.402813197368454 -4.25718559181174 -0.907208991312947 Q9UPX8 SHANK2 Q9UPX8.3.S1713.p_SHANK2 Q9UPX8-3_S1709sS1713s_2_2_1709_1713 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6|Q9UPX8-4|E7EUA2 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14189.14189.3 9.61 9.61 1.896 3 2 2 0 711.0179 1971.1098 S1709s S1713s TMT10 1706 (R) RAPsPVVsPTEMNK (E) RAPS(0.99)PVVS(0.99)PT(0.0)EMNK K:TMT10,s:Phosphorylated S SHANK2 202341.2 2 39 86.1 628.23 HUMAN 1 -21.7156 -3.949 RAPSQGGTWGRRSPL-p A4D1S0;T181-p RAPSQGGTWGRRSPL 0.898896426785364 0.588756989165439 0.023 0.0626666666666667 0.904665344418994 3.10987356219596 0.023 0.0626666666666667 0.811957813798061 0.488666585871885 0.249790751897644 0.742535426105217 A4D1S0 KLRG2 A4D1S0.T181.p_KLRG2 A4D1S0_T181t _1_1_181_181 A4D1S0 A4D1S0|A4D1S0-2 Killer cell lectin-like receptor subfamily G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5325.5325.3 9.88 9.88 1.411 2 1 1 0 494.5792 1401.7549 T181t TMT10 175 (R) APSQGGtWGRR (S) APS(0.0)QGGT(0.99)WGRR t:Phosphorylated T KLRG2 43534.4 4 9 945.1 197.69 HUMAN 1 0.9047 3.1099 RAPSRKDSLESDSST-p Q9UMX1;S346-p RAPSRKDSLESDSST 0.448993976771338 0.127393275558649 0.137 0.170333333333333 6.42296376500287 11.7958345328718 0.137 0.170333333333333 0.227878642421772 0.0661327445719166 1.35957777147417 2.2950505638492 Q9UMX1 SUFU Q9UMX1.S346.p_SUFU Q9UMX1_S346s _1_1_346_346 Q9UMX1 Q9UMX1|Q9UMX1-3|Q9UMX1-2 Suppressor of fused homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19648.19648.4 20.66 20.66 1.16 5 1 1 0 663.1036 2569.4238 S346s TMT10 344 (R) KDsLESDSSTAIIPHELIR (T) KDS(0.99)LES(0.0)DS(0.0)S(0.0)T(0.0)AIIPHELIR K:TMT10,s:Phosphorylated S SUFU 54288.1 5 3 2747.1 71.93 HUMAN 1 6.423 11.7958 RAPSTSDSVRLKCRE-p P23193;S139-p RAPSTSDSVRLKCRE 0.79813572883131 0.656267638546921 -0.0613333333333334 -0.0743333333333333 1.88668484893746 2.4997726968317 -0.0613333333333334 -0.0743333333333333 0.647636795310005 0.562370758055668 -0.483558740858185 -0.61676248878469 P23193 TCEA1 P23193.S139.p_TCEA1 P23193_S139s _1_1_139_139 P23193 P23193|A0A1W2PPZ5|P23193-2|A0A1W2PRL9 Transcription elongation factor A protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10413.10413.3 13.78 9.38 1.123 4 1 1 0 566.978 1618.9528 S139s TMT10 133 (R) APSTSDsVRLK (C) APS(0.0)T(0.0)S(0.0)DS(0.99)VRLK K:TMT10,s:Phosphorylated S TCEA1 34425.5 1 4 704.1 239.31 HUMAN 1 -1.8867 -2.4998 RAPVILGSPDDVLEF-p P09467;S321-p RAPVILGSPDDVLEF 0.810897784206407 0.231869998976358 0.0466666666666667 0.119666666666667 1.74851642965452 8.36097191934653 0.0466666666666667 0.119666666666667 0.668572265989753 0.14584878248217 0.452359751400999 1.69716523785467 P09467 FBP1 P09467.S321.p_FBP1 P09467_S321s _1_1_321_321 P09467 P09467 Fructose-1,6-bisphosphatase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37634.37634.3 12.49 12.49 99 1 1 1 0 751.0854 2171.2728 S321s TMT10 315 (R) APVILGsPDDVLEFLK (V) APVILGS(1.0)PDDVLEFLK K:TMT10,s:Phosphorylated S FBP1 37241.2 1 3 3973.1 39.97 HUMAN 1 1.7485 8.361 RAQQRAESPESSAIE-p Q9NTI5;S1358-p RAQQRAESPESSAIE 0.26421550293066 0.0245365822801729 0.258333333333333 0.608666666666667 10.964639328704 21.9165001968181 0.258333333333333 0.608666666666667 0.0800822132129285 0.00643205842035911 2.14991558776783 4.29833798283999 Q9NTI5 PDS5B Q9NTI5.S1358.p_PDS5B Q9NTI5_S1358s _1_1_1358_1358 Q9NTI5 Q9NTI5|Q9NTI5-2 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8121.8121.3 19.07 15.98 1.616 7 1 1 0 890.4249 2589.2954 S1358s Hydrogen 1352 (R) AQQRAEsPESSAIESTQSTPQK (G) AQQRAES(0.99)PES(0.0)S(0.0)AIES(0.0)T(0.0)QS(0.0)T(0.0)PQK K:TMT10-Lys-Only,s:Phosphorylated S PDS5B 165919.5 10 15 100.1 597.99 HUMAN 1 10.9646 21.9165 RAQSGSDSSPEPKAP-p Q9UQ35;S1620-p RAQSGSDSSPEPKAP 0.863245250945555 0.0316359987498557 0.031 0.871666666666667 1.24559167349896 20.257749483921 0.031 0.871666666666667 0.750655779417872 0.00942377810646993 0.334396531177295 3.93074700598052 Q9UQ35 SRRM2 Q9UQ35.S1620.p_SRRM2 Q9UQ35_S1620sS1621s_2_2_1620_1621 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7729.7729.4 14.7 14.7 2.17 4 2 2 0 575.7735 2140.1399 S1620s S1621s TMT10 1614 (R) AQSGSDssPEPKAPAPR (A) AQS(0.0)GS(0.0)DS(0.99)S(0.99)PEPKAPAPR K:TMT10,s:Phosphorylated S SRRM2 300351.7 9 220 2.1 3310.34 HUMAN 1 1.2456 20.2577 RARESSDSEEEYKKT-p Q9BYW2;S461-p RARESSDSEEEYKKT 0.799321908925685 0.872888347980138 -0.054 0.0213333333333334 1.87300775495087 0.832539988564735 -0.054 0.0213333333333334 0.649679591641666 0.825554979241609 -0.480491346096493 0.231306448818033 Q9BYW2 SETD2 Q9BYW2.S461.p_SETD2 Q9BYW2_S458sS459sS461s_3_3_458_461 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9399.9399.5 8.39 8.39 7.035 4 3 3 0 497.8243 2245.1915 S458s S459s S461s TMT10 455 (R) AREssDsEEEYKK (T) ARES(0.99)S(0.99)DS(0.99)EEEY(0.0)KK K:TMT10,s:Phosphorylated S SETD2 290615.4 1 37 58.1 711.11 HUMAN 1 -1.873 0.8325 RARGQGSSPVAMQKA-p P18206-2;S346-p RARGQGSSPVAMQKA 0.386921559320637 0.948164878434691 -0.16 0.00866666666666669 7.63134281046278 0.331023044397537 -0.16 0.0086666666666667 0.17253043565579 0.926611520723721 -1.57113513279659 0.0964716591159192 P18206 VCL P18206.2.S346.p_VCL P18206-2_S346s_1_1_346_346 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5775.5775.2 10.51 10.51 1.118 2 1 1 0 822.4155 1547.8616 S346s M350m TMT10 342 (R) GQGSsPVAmQK (A) GQGS(0.0)S(0.99)PVAM(1.0)QK K:TMT10,s:Phosphorylated S,m:Oxidized methionine VCL 117290.9 2 6 319.1 365.38 HUMAN 1 -7.6313 0.331 RARGVSRSPPKKKNK-p Q8TAD8;S76-p RARGVSRSPPKKKNK 0.371221676120467 0.0135184331227 -0.291 0.809 7.98144316099099 25.9795007129686 -0.291 0.809 0.159167972383317 0.00252377090134555 -1.63194131710381 5.28926771203062 Q8TAD8 SNIP1 Q8TAD8.S76.p_SNIP1 Q8TAD8_S76s _1_1_76_76 Q8TAD8 Q8TAD8 Smad nuclear-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4954.4954.3 9.21 2.77 2.772 2 1 1 0 455.9264 1285.7992 S76s TMT10 72 (R) GVSRsPPK (K) GVS(0.0)RS(0.99)PPK K:TMT10,s:Phosphorylated S SNIP1 45833.8 2 3 1038.1 185.39 HUMAN 1 -7.9814 25.9795 RARHRLLSGDSTEKR-p Q6P0Q8;S1032-p RARHRLLSGDSTEKR 0.0520154613962689 0.00379001554573942 -0.438333333333333 -0.622333333333333 27.9340892727855 35.8953973068036 -0.438333333333333 -0.622333333333333 0.00160912978135533 0.000257312135609656 -5.82737368818268 -8.42975381171843 Q6P0Q8 MAST2 Q6P0Q8.S1032.p_MAST2 Q6P0Q8_S1032s _1_1_1032_1032 Q6P0Q8 Q6P0Q8|Q6P0Q8-2|E7ERL6 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14974.14974.2 9.4 3.51 2.491 3 1 1 0 744.3906 1407.8095 S1032s TMT10 1030 (R) LLsGDSTEK (R) LLS(0.99)GDS(0.0)T(0.0)EK K:TMT10,s:Phosphorylated S MAST2 197687.5 3 53 121.1 549.41 HUMAN 1 -27.9341 -35.8954 RARKKTVSASESEDR-p Q9ULG6-5;S186-p RARKKTVSASESEDR 0.0291798921635941 0.00222682980082593 -0.653333333333333 -0.924666666666667 35.832677728148 41.1380711912697 -0.653333333333333 -0.924666666666667 0.000261055127129358 7.69472105918856e-05 -8.42270265796678 -10.6552859055996 Q9ULG6 CCPG1 Q9ULG6.5.S186.p_CCPG1 Q9ULG6-5_S186s _1_1_186_186 Q9ULG6-5 Q9ULG6-4|Q9ULG6-3|Q9ULG6-5|Q9ULG6-2 Isoform 5 of Cell cycle progression protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11462.11462.4 15.73 8.81 1.136 6 1 1 0 886.9782 3464.9254 S186s TMT10 182 (R) KKTVsASESEDRLVAEQETEPSK (E) KKT(0.0)VS(0.99)AS(0.0)ES(0.0)EDRLVAEQET(0.0)EPS(0.0)K K:TMT10,s:Phosphorylated S CCPG1 94171.2 3 1 3887.1 41.36 HUMAN 1 -35.8327 -41.1381 RARKMEDSKEKNGKK-p P11233;S183-p RARKMEDSKEKNGKK 0.108085133456159 0.0013882827676627 0.402333333333333 1.11433333333333 20.3114427036422 46.2973173091259 0.402333333333333 1.11433333333333 0.00930798617652423 2.34567732186547e-05 3.9461104136415 13.3618059373476 P11233 RALA P11233.S183.p_RALA P11233_S183s _1_1_183_183 P11233 P11233 Ras-related protein Ral-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.6894.6894.3 8.87 8.87 99 1 1 1 0 664.3721 1911.1391 S183s TMT10 179 (R) KMEDsKEK (N) KMEDS(1.0)KEK K:TMT10,s:Phosphorylated S RALA 23737.5 1 3 4287.1 34.16 HUMAN 1 20.3114 46.2973 RARKWSNSQPADLAH-p Q9BRG2;S147-p RARKWSNSQPADLAH 0.431530830279676 0.155444377308683 0.119666666666667 0.171333333333333 6.72023088315284 10.6319171684052 0.119666666666667 0.171333333333333 0.2128025911137 0.0864586167851574 1.41194664224257 2.09083599177669 Q9BRG2 SH2D3A Q9BRG2.S147.p_SH2D3A Q9BRG2_S147s _1_1_147_147 Q9BRG2 Q9BRG2|Q9BRG2-2 SH2 domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13832.13832.4 19.13 19.13 2.383 2 1 1 0 559.7828 2156.1435 S147s TMT10 143 (R) KWSNsQPADLAHMGR (S) KWS(0.0)NS(0.99)QPADLAHMGR K:TMT10,s:Phosphorylated S SH2D3A 63662.5 8 4 1551.1 132.49 HUMAN 1 6.7202 10.6319 RARLGDASDTEAADG-p J3KQR7;S1136-p RARLGDASDTEAADG 0.11739359398931 0.220095459026575 0.276666666666667 -0.212666666666667 19.355898101877 8.65463314860922 0.276666666666667 -0.212666666666667 0.0115987233485101 0.136312814567127 3.74206236451277 -1.74797628192873 J3KQR7 NotFound J3KQR7.S1136.p_NotFound J3KQR7_S1136s _1_1_1136_1136 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10601.10601.4 21.37 21.37 2.792 3 1 1 0 869.4156 3394.6672 S1136s Hydrogen 1132 (R) LGDAsDTEAADGERGSLGNPEPVGRPAAEQAK (K) LGDAS(0.99)DT(0.0)EAADGERGS(0.0)LGNPEPVGRPAAEQAK K:TMT10-Lys-Only,s:Phosphorylated S CEP170B 172326.6 5 26 51.1 746.11 HUMAN 1 19.3559 -8.6546 RARLGEASDSELADA-p Q5SW79;S1112-p RARLGEASDSELADA 0.726935837841591 0.291886460688141 0.055 0.104666666666667 2.62749908642358 7.05845912374574 0.055 0.104666666666667 0.546072229882032 0.196858461938158 0.643681594855191 1.47083257814005 Q5SW79 CEP170 Q5SW79.S1112.p_CEP170 Q5SW79_S1112s _1_1_1112_1112 Q5SW79 Q5SW79|Q5SW79-3|Q5SW79-2 Centrosomal protein of 170 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16799.16799.2 14.01 14.01 1.233 2 1 1 0 979.9781 1878.9697 S1112s TMT10 1108 (R) LGEAsDSELADADK (A) LGEAS(0.99)DS(0.0)ELADADK K:TMT10,s:Phosphorylated S CEP170 175689.3 7 18 128.1 537.52 HUMAN 1 2.6275 7.0585 RARPAAASPRAEPWL-p Q8NC56;S82-p RARPAAASPRAEPWL 0.696606668100057 0.0747616065295241 0.0923333333333333 -0.209333333333333 2.95111813949944 14.9476833235141 0.0923333333333334 -0.209333333333333 0.506860194673668 0.0320060196582968 0.710466234238798 -2.86678218710951 Q8NC56 LEMD2 Q8NC56.S82.p_LEMD2 Q8NC56_S82s _1_1_82_82 Q8NC56 Q8NC56 LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20637.20637.5 27.16 21.31 7.556 10 1 1 0 930.8645 4570.3177 S82s TMT10 76 (R) ARPAAAsPRAEPWLSQPASGSAYATPGAYGDIRPSAASWVGSR (G) ARPAAAS(0.99)PRAEPWLS(0.0)QPAS(0.0)GS(0.0)AY(0.0)AT(0.0)PGAY(0.0)GDIRPS(0.0)AAS(0.0)WVGS(0.0)R s:Phosphorylated S LEMD2 57373.5 1 2 664.1 250.64 HUMAN 1 2.9511 -14.9477 RARPATDSFDDYPPR-p P23588;S207-p RARPATDSFDDYPPR 0.948248294818685 0.979868100092263 0.0126666666666667 -0.00366666666666665 0.45826395240312 0.126263209615153 0.0126666666666667 -0.00366666666666666 0.899857218327738 0.971345380340326 0.131862679873359 -0.0376089192504919 P23588 EIF4B P23588.S207.p_EIF4B P23588_S207s _1_1_207_207 P23588 E7EX17|P23588 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10161.10910.3 13.75 9.9 1.572 3 1 1 0 639.6291 1836.9078 S207s TMT10 201 (R) ARPATDsFDDYPPR (R) ARPAT(0.0)DS(0.99)FDDY(0.0)PPR s:Phosphorylated S EIF4B 69207 2 5 146.1 516.36 HUMAN 1 0.4583 -0.1263 RARPRSNSAWQIYLQ-p Q8N4C8;S701-p RARPRSNSAWQIYLQ 0.683650164257516 0.130413759362315 0.0703333333333333 0.313 3.09595104829289 11.6590428943993 0.0703333333333333 0.313 0.490235655819315 0.0682489085680264 0.739834558347324 2.27090478619153 Q8N4C8 MINK1 Q8N4C8.S701.p_MINK1 Q8N4C8_S701s _1_1_701_701 Q8N4C8 Q8N4C8|Q8N4C8-4 Misshapen-like kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22396.22396.3 14.4 14.4 1.104 3 1 1 0 558.945 1594.8539 S701s TMT10 699 (R) SNsAWQIYLQR (R) S(0.0)NS(0.99)AWQIY(0.0)LQR s:Phosphorylated S MINK1 150503.5 1 19 131.3 535.29 HUMAN 1 3.096 11.659 RARRLQLSPWESSVV-p Q14244-7;S241-p RARRLQLSPWESSVV 0.807840650085328 0.0300020896282709 -0.0393333333333333 -0.442666666666667 1.77944176444825 20.6064829055697 -0.0393333333333333 -0.442666666666667 0.663828392414724 0.0086966443402775 -0.45938423191586 -4.00643906662015 Q14244 MAP7 Q14244.7.S241.p_MAP7 Q14244-7_S241s _1_1_241_241 Q14244-7 A0A087WZ40|Q14244-7|Q14244-4|Q14244-6|Q14244-2|Q14244-3|Q14244-5 Isoform 7 of Ensconsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25791.25791.3 16.64 16.64 4.091 3 1 1 0 608.6468 1743.9591 S241s TMT10 238 (R) LQLsPWESSVVNR (L) LQLS(0.99)PWES(0.0)S(0.0)VVNR s:Phosphorylated S MAP7 87064.8 3 4 581.1 266.4 HUMAN 1 -1.7794 -20.6065 RARRRLGSGPDRELR-p Q6NUJ5;S206-p RARRRLGSGPDRELR 0.0298942499142761 0.0104621656458214 -0.684333333333333 -0.603666666666667 35.6080998076112 27.7859622194962 -0.684333333333333 -0.603666666666667 0.000274909671731651 0.00166495989968875 -8.3373262494118 -5.77749627543331 Q6NUJ5 PWWP2B Q6NUJ5.S206.p_PWWP2B Q6NUJ5_S206s _1_1_206_206 Q6NUJ5 Q6NUJ5|Q6NUJ5-2 PWWP domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11417.11417.4 12.92 12.92 12.919 3 1 1 0 847.4372 3306.7443 S206s TMT10 204 (R) LGsGPDRELRKPEEPENGEPTAAATAR (R) LGS(0.99)GPDRELRKPEEPENGEPT(0.0)AAAT(0.0)AR K:TMT10,s:Phosphorylated S PWWP2B 64650.6 2 4 2283.1 89.78 HUMAN 1 -35.6081 -27.786 RARTMALYNPIPVRQ-p A0A087WW63;Y62-p RARTMALYNPIPVRQ 0.691026542335788 0.549924210794757 0.0583333333333333 -0.0786666666666666 3.00945659632277 3.49530524303414 0.0583333333333333 -0.0786666666666667 0.500097104872838 0.447166721657945 0.722332386023544 -0.819211284013788 A0A087WW63 CACNA1A A0A087WW63.Y62.p_CACNA1A A0A087WW63_T58tY62y_2_2_58_62 A0A087WW63 A0A087WW63|A0A1C7CYY9|A0A1B0GTN7|A0A1B0GU81|O00555-8|O00555-4|A0A1B0GUS3 Voltage-dependent P/Q-type calcium channel subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3444.3444.4 7.28 3.02 1.103 3 2 2 0 653.0642 2432.3216 T58t M59m Y62y N63n TMT10 50 (K) QSMAQRARtmALynPIPVR (Q) QS(0.0)M(0.0)AQRART(0.99)M(0.99)ALY(0.99)N(1.0)PIPVR t:Phosphorylated T,m:Oxidized methionine,y:Phosphorylated Y,n:Deamidated CACNA1A 284723.9 4 1 340.2 353.72 HUMAN 1 3.0095 -3.4953 RARTPARTPDRLAKQ-p Q9H2D6;T1965-p RARTPARTPDRLAKQ 0.131504655206906 0.0176032432582518 -0.422 -0.39 18.2056106721512 24.1696590806575 -0.422 -0.39 0.0151160713362005 0.00382854796077776 -3.50399705289354 -4.83073456115216 Q9H2D6 TRIOBP Q9H2D6.T1965.p_TRIOBP Q9H2D6_T1965t _1_1_1965_1965 Q9H2D6 Q9H2D6|Q9H2D6-2|Q9H2D6-3|Q9H2D6-7|Q9H2D6-5|Q9H2D6-6 TRIO and F-actin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5919.5919.4 7.8 7.8 3.396 2 1 1 0 441.7536 1684.027 T1965t TMT10 1961 (R) TPARtPDRLAK (Q) T(0.0)PART(0.99)PDRLAK K:TMT10,t:Phosphorylated T TRIOBP 264280.7 2 6 1168.1 170.4 HUMAN 1 -18.2056 -24.1697 RASAGRLTPESQSKT-p J3KQV8;T1259-p RASAGRLTPESQSKT 0.903075637592031 0.61681079314915 -0.0196666666666667 0.051 0.86908224644485 2.85257941465693 -0.0196666666666667 0.051 0.818637764852796 0.51849199838074 -0.240708812776189 0.690212910503434 J3KQV8 SYNJ1 J3KQV8.T1259.p_SYNJ1 J3KQV8_T1259t _1_1_1259_1259 J3KQV8 J3KQV8|O43426|A0A0D9SGJ6|C9JFZ1|O43426-2|O43426-4|J3KPK1 Synaptojanin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6672.6672.2 11.5 6.92 2.404 4 1 1 0 935.4952 1790.0172 T1259t TMT10 1253 (R) ASAGRLtPESQSK (T) AS(0.0)AGRLT(0.99)PES(0.0)QS(0.0)K K:TMT10,t:Phosphorylated T SYNJ1 178858.1 5 6 677.1 246.73 HUMAN 1 -0.8691 2.8526 RASCGPPSLPDPTFL-p J3KQR7;S1575-p RASCGPPSLPDPTFL 0.313268519533153 0.552441529021244 0.157333333333333 -0.0933333333333333 9.42745343700306 3.47058325721713 0.157333333333333 -0.0933333333333334 0.114091858938276 0.449719453542992 1.88238681345082 -0.814349443830102 J3KQR7 NotFound J3KQR7.S1575.p_NotFound J3KQR7_S1575s _1_1_1575_1575 J3KQR7 J3KQR7|Q9Y4F5 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25212.25212.3 14.02 14.02 2.548 3 1 1 0 779.369 2256.1168 S1575s TMT10 1569 (R) ASCGPPsLPDPTFLPDAER (F) AS(0.0)CGPPS(0.99)LPDPT(0.0)FLPDAER C:Carbamidomethylation,s:Phosphorylated S CEP170B 172326.6 1 34 51.1 746.11 HUMAN 1 9.4275 -3.4706 RASDGSRSPTPSQKL-p Q9UPQ7;S848-p RASDGSRSPTPSQKL 0.198997338184869 0.0254546745368918 0.291666666666667 0.305 13.6493824101631 21.6946729073153 0.291666666666667 0.305 0.0431580445497476 0.00676912773277035 2.62876696950276 4.2480438503363 Q9UPQ7 PDZRN3 Q9UPQ7.S848.p_PDZRN3 Q9UPQ7_S848s _1_1_848_848 Q9UPQ7 Q9UPQ7 E3 ubiquitin-protein ligase PDZRN3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4065.4065.3 14.07 8.64 1.318 5 1 1 0 619.3148 1775.9652 S848s TMT10 842 (R) ASDGSRsPTPSQK (L) AS(0.0)DGS(0.0)RS(0.99)PT(0.0)PS(0.0)QK K:TMT10,s:Phosphorylated S PDZRN3 121191.8 1 2 4772.1 26.87 HUMAN 1 13.6494 21.6947 RASFLMRSDTAVQKL-p Q9UQC2;S223-p RASFLMRSDTAVQKL 0.0901187281838346 0.00761764489245076 -0.527 -0.580666666666667 22.2348654422506 30.2426172052309 -0.527 -0.580666666666667 0.0059774156426861 0.000945667098679954 -4.37584466084098 -6.49587519225663 Q9UQC2 GAB2 Q9UQC2.S223.p_GAB2 Q9UQC2_S223s _1_1_223_223 Q9UQC2 Q9UQC2|Q9UQC2-2 GRB2-associated-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17034.17034.3 16.11 16.11 2.119 3 1 1 0 664.6847 1912.0726 S223s TMT10 217 (R) ASFLMRsDTAVQK (L) AS(0.0)FLMRS(0.99)DT(0.0)AVQK K:TMT10,s:Phosphorylated S GAB2 74969.7 3 2 698.1 241.06 HUMAN 1 -22.2349 -30.2426 RASGGAQSPLRYLHV-p Q6NXT1;S63-p RASGGAQSPLRYLHV 0.542598101317312 0.0836330625227247 0.0943333333333333 0.202666666666667 4.90035149594812 14.267069035478 0.0943333333333334 0.202666666666667 0.323567467958488 0.0374363153062727 1.08576496118122 2.74040390026251 Q6NXT1 ANKRD54 Q6NXT1.S63.p_ANKRD54 Q6NXT1_S63s _1_1_63_63 Q6NXT1 Q6NXT1|D3YTC9 Ankyrin repeat domain-containing protein 54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5447.5447.2 12.81 8.66 4.828 2 1 1 0 626.8167 1172.6585 S63s TMT10 57 (R) ASGGAQsPLR (Y) AS(0.0)GGAQS(0.99)PLR s:Phosphorylated S ANKRD54 32904.3 4 3 3920.1 40.66 HUMAN 1 4.9004 14.2671 RASGLLKSPASLKAH-p P51957;S340-p RASGLLKSPASLKAH 0.719995318616615 0.00244719197011589 -0.083 -1.22633333333333 2.69284328451778 40.0440139354552 -0.083 -1.22633333333333 0.537917497759004 9.89916598673537e-05 -0.657303662221841 -10.1511771402525 P51957 NEK4 P51957.S340.p_NEK4 P51957_S340s _1_1_340_340 P51957 P51957|P51957-2|P51957-3 Serine/threonine-protein kinase Nek4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19337.19337.3 12.48 12.48 1.278 3 1 1 0 647.0583 1859.1933 S340s TMT10 334 (R) ASGLLKsPASLK (A) AS(0.0)GLLKS(0.99)PAS(0.0)LK K:TMT10,s:Phosphorylated S NEK4 95394.3 1 2 1066.1 181.01 HUMAN 1 -2.6928 -40.044 RASLGQASIQNGKDS-p E9PC69;S497-p RASLGQASIQNGKDS 0.769828161282449 0.0377617688688658 -0.0723333333333333 -0.285666666666667 2.17635698678719 19.1136923075899 -0.0723333333333334 -0.285666666666667 0.605848868772261 0.0122639612391924 -0.547512789652741 -3.68801048778516 E9PC69 NotFound E9PC69.S497.p_NotFound E9PC69_S497s_1_1_497_497 E9PC69 Q7KZI7|Q7KZI7-8|Q7KZI7-9|Q7KZI7-4|Q7KZI7-16|Q7KZI7-5|Q7KZI7-15|Q7KZI7-2|E9PC69|Q7KZI7-11|Q7KZI7-6|Q7KZI7-3|Q7KZI7-14|Q7KZI7-12|Q7KZI7-7|Q7KZI7-13|Q7KZI7-10 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12275.12275.3 9.77 9.77 9.767 2 1 1 0 571.6382 1631.9481 S497s N500n TMT10 491 (R) ASLGQAsIQnGK (D) AS(0.0)LGQAS(0.99)IQN(1.0)GK K:TMT10,s:Phosphorylated S,n:Deamidated MARK2 87089.2 1 14 200.1 451.67 HUMAN 1 -2.1764 -19.1137 RASMGVLSGKRKLIT-p Q12888-2;S1670-p RASMGVLSGKRKLIT 0.248343180770471 0.00385203903768179 -0.212333333333333 -0.733 11.5579098013441 35.722595508287 -0.212333333333333 -0.733 0.0698568534457551 0.000267756763073593 -2.2541564681322 -8.36406742771718 Q12888 TP53BP1 Q12888.2.S1670.p_TP53BP1 Q12888-2_S1670s _1_1_1670_1670 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13181.13181.2 10.53 10.53 3.145 2 1 1 0 579.7936 1078.6128 S1670s Hydrogen 1664 (R) ASMGVLsGK (R) AS(0.0)MGVLS(0.99)GK K:TMT10-Lys-Only,s:Phosphorylated S TP53BP1 216167.2 1 72 3.1 2297.07 HUMAN 1 -11.5579 -35.7226 RASPAEGSAGSPGSP-p A4D1S0;S209-p RASPAEGSAGSPGSP 0.148266672319898 0.947207416949067 0.364333333333333 0.0153333333333333 16.7600987411154 0.336665065117794 0.364333333333334 0.0153333333333333 0.0210858020874652 0.925408519717687 3.21553235609581 0.098059006946747 A4D1S0 KLRG2 A4D1S0.S209.p_KLRG2 A4D1S0_S209s _1_1_209_209 A4D1S0 A4D1S0|A4D1S0-2 Killer cell lectin-like receptor subfamily G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5937.5937.3 18.13 18.13 1.155 5 1 1 0 686.6257 1977.8956 S209s TMT10 203 (R) ASPAEGsAGSPGSPTCCR (C) AS(0.0)PAEGS(0.99)AGS(0.0)PGS(0.0)PT(0.0)CCR C:Carbamidomethylation,s:Phosphorylated S KLRG2 43534.4 1 11 945.1 197.69 HUMAN 1 16.7601 0.3367 RASPAQASPAGTPPG-p J3KQC6;S60-p RASPAQASPAGTPPG 0.843942307663143 0.164721327820138 0.042 -0.163 1.42638540619405 10.2980875536303 0.042 -0.163 0.720048018153005 0.0933665356406958 0.377659167701132 -2.03269960446658 J3KQC6 NotFound J3KQC6.S60.p_NotFound J3KQC6_S60s _1_1_60_60 J3KQC6 Q9BYE2|J3KQC6|E9PRA0|Q9BYE2-2|Q9BYE2-5|Q9BYE2-3 Transmembrane protease serine 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5425.5425.4 11 11 1.226 4 1 1 0 536.2727 2062.0991 S60s TMT10 54 (R) ASPAQAsPAGTPPGRASPGR (A) AS(0.0)PAQAS(0.99)PAGT(0.0)PPGRAS(0.0)PGR s:Phosphorylated S TMPRSS13 64250 3 3 1604.1 128.27 HUMAN 1 1.4264 -10.2981 RASPRPWTPEDPWSL-p Q14934-3;T289-p RASPRPWTPEDPWSL 0.455538062417866 0.172356098498525 0.252333333333333 -0.270666666666667 6.29896500656755 10.0383242587089 0.252333333333333 -0.270666666666667 0.234478754923449 0.0991214334825054 1.33765185513186 -1.98756226589052 Q14934 NFATC4 Q14934.3.T289.p_NFATC4 Q14934-3_T289t _1_1_289_289 Q14934-3 Q14934-8|Q14934-9|Q14934-10|Q14934-11|Q14934-12|Q14934-13|Q14934-3|Q14934-4|Q14934-5|Q14934-6|Q14934-7|Q14934-14|Q14934-15|Q14934-16|Q14934-17|Q14934-18 Isoform 3 of Nuclear factor of activated T-cells, cytoplasmic 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23834.23834.3 10.29 4.24 1.346 5 1 1 0 907.1003 2639.3204 T289t TMT10 283 (R) ASPRPWtPEDPWSLYGPSPGGR (G) AS(0.0)PRPWT(0.99)PEDPWS(0.0)LY(0.0)GPS(0.0)PGGR t:Phosphorylated T NFATC4 102537.7 1 13 1768.1 116.39 HUMAN 1 6.299 -10.0383 RASRVPSSDEEVVEE-p Q9C0C2;S1621-p RASRVPSSDEEVVEE 0.670375570853073 0.479524924778385 0.0743333333333333 0.067 3.25196714863058 4.2591653309903 0.0743333333333333 0.067 0.472936992345889 0.375045075098125 0.771141085371985 0.966184789699571 Q9C0C2 TNKS1BP1 Q9C0C2.S1621.p_TNKS1BP1 Q9C0C2_S1620sS1621s_2_2_1620_1621 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8891.9518.3 16.4 16.4 16.403 3 2 2 0 616.2427 1686.7817 S1620s S1621s Hydrogen 1618 (R) VPssDEEVVEEPQSR (R) VPS(0.99)S(0.99)DEEVVEEPQS(0.0)R s:Phosphorylated S TNKS1BP1 182819.3 31 88 4.1 2105.7 HUMAN 1 3.252 4.2592 RASSRRGSDASDFDI-p F6QMI7;S5477-p RASSRRGSDASDFDI 0.326712709573282 0.926905875789231 0.171666666666667 0.011 9.09334990465147 0.465823715858705 0.171666666666667 0.011 0.123215405188802 0.898292199499433 1.82452354507818 0.133925484599135 F6QMI7 DST F6QMI7.S5477.p_DST F6QMI7_S5477s _1_1_5477_5477 F6QMI7 Q03001|F8W9J4|F6QMI7|E9PHM6|Q03001-14|Q03001-8 Dystonin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19783.19783.4 29.13 29.13 1.133 8 1 1 0 974.709 3815.8456 S5477s TMT10 5475 (R) RGsDASDFDISEIQSVCSDVETVPQTHRPTPR (A) RGS(0.99)DAS(0.0)DFDIS(0.0)EIQS(0.0)VCS(0.0)DVET(0.0)VPQT(0.0)HRPT(0.0)PR C:Carbamidomethylation,s:Phosphorylated S DST 636850.7 3 10 796.2 223.72 HUMAN 1 9.0933 0.4658 RASSRRGSDASDFDL-p H3BQK9;S7534-p RASSRRGSDASDFDL 0.197992181086693 0.987104688886764 0.239 0.00200000000000002 13.7090341391058 0.0850186976188765 0.239 0.00200000000000002 0.0425693075763541 0.980614092488907 2.639650318873 0.0254399693007961 H3BQK9 NotFound H3BQK9.S7534.p_NotFound H3BQK9_S7534s _1_1_7534_7534 H3BQK9 H3BQK9|H3BPE1|Q9UPN3|Q9UPN3-5|Q9UPN3-2|Q9UPN3-3|Q9UPN3-4 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16689.16689.3 32.04 32.04 1.152 10 1 1 0 1224.8591 3592.5891 S7534s TMT10 7532 (R) RGsDASDFDLLETQSACSDTSESSAAGGQGNSR (R) RGS(0.99)DAS(0.0)DFDLLET(0.0)QS(0.0)ACS(0.0)DT(0.0)S(0.0)ES(0.0)S(0.0)AAGGQGNS(0.0)R C:Carbamidomethylation,s:Phosphorylated S MACF1 866539.7 3 15 472.1 301.95 HUMAN 1 13.709 0.085 RASVRGSSEEDEDAR-p Q8NC56;S139-p RASVRGSSEEDEDAR 0.473025507918826 0.16552827983193 0.121333333333333 0.165333333333333 5.99081115812056 10.2717650296613 0.121333333333333 0.165333333333333 0.251720672989505 0.0939341472299385 1.28292648460183 2.02812200506054 Q8NC56 LEMD2 Q8NC56.S139.p_LEMD2 Q8NC56_S138sS139s_2_2_138_139 Q8NC56 Q8NC56 LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4726.4726.4 12.11 8.37 2.121 4 2 2 0 592.2525 2206.0533 S138s S139s TMT10 133 (R) ASVRGssEEDEDARTPDR (A) AS(0.0)VRGS(0.99)S(0.99)EEDEDART(0.0)PDR s:Phosphorylated S LEMD2 57373.5 12 11 664.1 250.64 HUMAN 2 5.9908 10.2718 RATAKVPSPPDEHQE-p Q9BXS6;S135-p RATAKVPSPPDEHQE 0.300240588687515 0.847033417813763 0.151666666666667 -0.0193333333333333 9.8240748372445 1.01328729698067 0.151666666666667 -0.0193333333333333 0.104133991709564 0.791901690922892 1.95116183813552 -0.277180742961378 Q9BXS6 NUSAP1 Q9BXS6.S135.p_NUSAP1 Q9BXS6_S135s _1_1_135_135 Q9BXS6 Q9BXS6|Q9BXS6-2|Q9BXS6-5|Q9BXS6-3|Q9BXS6-6|Q9BXS6-4|Q9BXS6-7 Nucleolar and spindle-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9805.9805.5 11.04 11.04 1.75 5 1 1 0 718.5665 3508.8235 S135s TMT10 129 (R) ATAKVPsPPDEHQEAENAVSSGNRDSK (V) AT(0.0)AKVPS(0.99)PPDEHQEAENAVS(0.0)S(0.0)GNRDS(0.0)K K:TMT10,s:Phosphorylated S NUSAP1 49622.1 2 1 1571.1 130.66 HUMAN 1 9.8241 -1.0133 RATGAALTPTEERRT-p Q13459;T1346-p RATGAALTPTEERRT 0.609949898131441 0.00911063922551688 -0.132 -0.445 3.97829326019209 28.8624941697417 -0.132 -0.445 0.400101955482026 0.00129942310006841 -0.912978076754221 -6.08419742837684 Q13459 MYO9B Q13459.T1346.p_MYO9B Q13459_T1346t _1_1_1346_1346 Q13459 Q13459|M0R0P8|Q13459-2 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8392.8392.3 13.58 13.58 2.735 3 1 1 0 509.2544 1445.7797 T1346t TMT10 1340 (R) ATGAALtPTEER (R) AT(0.0)GAALT(0.99)PT(0.0)EER t:Phosphorylated T MYO9B 244993.9 3 13 211.1 438.12 HUMAN 1 -3.9783 -28.8625 RATGDGSSPELPSLE-p Q9H2Y7;S1026-p RATGDGSSPELPSLE 0.413312492292849 0.00611045881424865 -0.11 -0.531666666666667 7.07622150935024 31.9154135502918 -0.11 -0.531666666666667 0.196054966799187 0.000643366798453913 -1.47434890041977 -7.02465298843325 Q9H2Y7 ZNF106 Q9H2Y7.S1026.p_ZNF106 Q9H2Y7_S1025sS1026s_2_2_1025_1026 Q9H2Y7 Q9H2Y7|Q9H2Y7-2|A0A0C4DGM5 Zinc finger protein 106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18659.18659.3 11.26 11.26 11.261 4 2 2 0 635.6143 1744.8915 S1025s S1026s TMT10 1020 (R) ATGDGssPELPSLER (K) AT(0.0)GDGS(0.99)S(0.99)PELPS(0.0)LER s:Phosphorylated S ZNF106 210818.9 6 17 170.1 490.3 HUMAN 1 -7.0762 -31.9154 RATHGSNSLPSSARL-p Q8TDM6;S1254-p RATHGSNSLPSSARL 0.590040864524148 0.484261297116107 0.0713333333333333 0.0836666666666667 4.22161287798316 4.2045979465821 0.0713333333333333 0.0836666666666667 0.378302065228405 0.379787096597988 0.959261085680643 0.955874129856402 Q8TDM6 DLG5 Q8TDM6.S1254.p_DLG5 Q8TDM6_S1254s _1_1_1254_1254 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2|Q8TDM6-5 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4267.4267.3 17.39 17.39 3.035 5 1 1 0 531.9247 1513.792 S1254s TMT10 1248 (R) ATHGSNsLPSSAR (L) AT(0.0)HGS(0.0)NS(0.99)LPS(0.0)S(0.0)AR s:Phosphorylated S DLG5 215575.4 3 31 34.1 890.58 HUMAN 1 4.2216 4.2046 RATSVCISPYSGKNT-p Q68DQ2;S2868-p RATSVCISPYSGKNT 0.757838648247001 0.980270543149773 0.0543333333333333 0.00366666666666669 2.30571007249016 0.123386075594483 0.0543333333333333 0.00366666666666669 0.588069956707383 0.971989094888947 0.575487648026427 0.0367635938557855 Q68DQ2 CRYBG3 Q68DQ2.S2868.p_CRYBG3 Q68DQ2_S2868s _1_1_2868_2868 Q68DQ2 Q68DQ2|Q68DQ2-1|Q68DQ2-2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15768.15768.3 9.27 9.27 1.684 5 1 1 0 603.3074 1727.9402 S2868s TMT10 2862 (R) ATSVCIsPYSGK (N) AT(0.0)S(0.0)VCIS(0.99)PY(0.0)S(0.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CRYBG3 333308.2 1 15 582.1 265.87 HUMAN 1 2.3057 0.1234 RAVADTGSEDQGPGT-p Q9H4I2;S899-p RAVADTGSEDQGPGT 0.395347640438446 0.191766916650256 0.118333333333333 0.134666666666667 7.43445738000139 9.43081767252959 0.118333333333333 0.134666666666667 0.180532028494225 0.114003512603475 1.53686858729306 1.88225684156412 Q9H4I2 ZHX3 Q9H4I2.S899.p_ZHX3 Q9H4I2_S899s _1_1_899_899 Q9H4I2 Q9H4I2 Zinc fingers and homeoboxes protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14488.14488.3 21.36 21.36 1.144 4 1 1 0 893.444 2598.3411 S899s TMT10 893 (R) AVADTGsEDQGPGTGELTAVHK (G) AVADT(0.0)GS(0.99)EDQGPGT(0.0)GELT(0.0)AVHK K:TMT10,s:Phosphorylated S ZHX3 105511.4 2 5 1737.1 118.49 HUMAN 1 7.4345 9.4308 RAVARELSPDFYQPG-p Q9HDC5;S413-p RAVARELSPDFYQPG 0.241601130409521 0.0674035982773555 -0.182333333333333 -0.207666666666667 11.7963617809104 15.5826380204257 -0.182333333333333 -0.207666666666667 0.0661247163226906 0.0276526144166703 -2.29626610069576 -2.98641413113161 Q9HDC5 JPH1 Q9HDC5.S413.p_JPH1 Q9HDC5_S413s _1_1_413_413 Q9HDC5 Q9HDC5 Junctophilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23914.23914.3 17.26 17.26 3.276 3 1 1 0 765.0453 2213.1531 S413s TMT10 411 (R) ELsPDFYQPGPDYVK (Q) ELS(0.99)PDFY(0.0)QPGPDY(0.0)VK K:TMT10,s:Phosphorylated S JPH1 72141.1 1 5 675.1 247.46 HUMAN 1 -11.7964 -15.5826 RAVKDTLSNPQSPQP-p Q96PU5;S475-p RAVKDTLSNPQSPQP 0.181776097173604 0.135163567693297 0.218 0.246666666666667 14.5826726002686 11.4566216659573 0.218 0.246666666666667 0.0348123018044902 0.0715052341968948 2.80054134653662 2.23525176954019 Q96PU5 NEDD4L Q96PU5.S475.p_NEDD4L Q96PU5_S475s _1_1_475_475 Q96PU5 A0A1B0GVY1|Q96PU5|Q96PU5-7|Q96PU5-5|Q96PU5-6|Q96PU5-2|Q96PU5-3|Q96PU5-4|Q96PU5-9 E3 ubiquitin-protein ligase NEDD4-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11193.11193.4 16.9 12.88 1.115 6 1 1 0 936.2566 3662.0472 S475s TMT10 469 (R) AVKDTLsNPQSPQPSPYNSPKPQHK (V) AVKDT(0.0)LS(0.99)NPQS(0.0)PQPS(0.0)PY(0.0)NS(0.0)PKPQHK K:TMT10,s:Phosphorylated S NEDD4L 112272 10 14 495.1 293.21 HUMAN 1 14.5827 11.4566 RAVQKRASPNSDDTV-p Q9UH62;S110-p RAVQKRASPNSDDTV 0.742175050092019 0.193749393590485 0.066 0.129333333333333 2.45910120586898 9.37211255761432 0.066 0.129333333333333 0.567662073755441 0.115555000622183 0.60823299637394 1.87209477059467 Q9UH62 ARMCX3 Q9UH62.S110.p_ARMCX3 Q9UH62_S110s _1_1_110_110 Q9UH62 Q9UH62 Armadillo repeat-containing X-linked protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15764.15764.5 11.58 11.58 1.161 4 1 1 0 505.4632 2443.3193 S110s TMT10 108 (K) RAsPNSDDTVLSPQELQK (V) RAS(0.99)PNS(0.0)DDT(0.0)VLS(0.0)PQELQK K:TMT10,s:Phosphorylated S ARMCX3 42842.2 3 4 2535.1 79.58 HUMAN 1 2.4591 9.3721 RAVRRLRTACERAKR-p P11142;T265-p RAVRRLRTACERAKR 0.36371578203964 0.664780300015656 0.153 -0.0616666666666667 8.15276613740159 2.42727341376142 0.153 -0.0616666666666666 0.153011258173301 0.571837534858138 1.66165152349302 -0.601399657517902 P11142 HSPA8 P11142.T265.p_HSPA8 P11142_T265t _1_1_265_265 P11142 P11142|P17066|A0A0G2JIW1|P0DMV8 Heat shock cognate 71 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4117.4117.3 8.39 8.39 99 1 1 1 0 405.535 1134.6251 T265t TMT10 263 (R) LRtACER (A) LRT(1.0)ACER C:Carbamidomethylation,t:Phosphorylated T HSPA8 71125 1 16 367.1 341.38 HUMAN 1 8.1528 -2.4273 RAVSREDSARPGAHA-p Q13151;S88-p RAVSREDSARPGAHA 0.0608498573638083 0.0298939757454492 1.147 -0.457 26.5504984956874 20.6304225615602 1.147 -0.457 0.00221284069881302 0.00864883762879698 5.44749602438848 -4.01166530575875 Q13151 HNRNPA0 Q13151.S88.p_HNRNPA0 Q13151_S88s _1_1_88_88 Q13151 Q13151 Heterogeneous nuclear ribonucleoprotein A0 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3313.3313.4 12.03 12.03 2.496 2 1 1 0 523.2781 2010.1245 S88s TMT10 82 (R) AVSREDsARPGAHAK (V) AVS(0.0)REDS(0.99)ARPGAHAK K:TMT10,s:Phosphorylated S HNRNPA0 31011.2 1 4 2372.1 86.26 HUMAN 1 26.5505 -20.6304 RAWLDEDSNLSPSPL-p Q9C086;S127-p RAWLDEDSNLSPSPL 0.661192861354133 0.742688068284653 -0.0903333333333333 0.0453333333333334 3.36472876740302 1.78117434640499 -0.0903333333333334 0.0453333333333334 0.460815547387665 0.663563616380341 -0.793567343503217 0.459725754729189 Q9C086 INO80B Q9C086.S127.p_INO80B Q9C086_S127s _1_1_127_127 Q9C086 J3KQ70|Q9C086|F8WCL7|B8ZZ93 INO80 complex subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24899.24899.3 12.33 12.33 1.115 3 1 1 0 670.3255 1928.9915 S127s TMT10 121 (R) AWLDEDsNLSPSPLR (D) AWLDEDS(0.99)NLS(0.0)PS(0.0)PLR s:Phosphorylated S INO80B 39035.8 1 3 1391.1 147.13 HUMAN 1 -3.3647 1.7812 RAYQDQISPVPGAPK-p W0Z7M9;S420-p RAYQDQISPVPGAPK 0.108078410418423 0.00828279311297773 -0.317666666666667 -0.592333333333333 20.3484689889253 29.6022798292708 -0.317666666666667 -0.592333333333333 0.0092289671705083 0.00109590275086938 -3.95413788183547 -6.3022076483117 W0Z7M9 MKL1 W0Z7M9.S420.p_MKL1 W0Z7M9_S420s _1_1_420_420 W0Z7M9 W0Z7M9|Q969V6|A0A087WU73|B0QY83|A0A087X287|E7ER32 MKL/myocardin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13248.13248.2 13.58 11.31 5.755 2 1 1 0 890.4525 1699.9217 S420s Hydrogen 414 (R) AYQDQIsPVPGAPK (A) AY(0.0)QDQIS(0.99)PVPGAPK K:TMT10-Lys-Only,s:Phosphorylated S mkl1 103399.4 4 5 1467.1 139.9 HUMAN 1 -20.3485 -29.6023 RCAECLDSDYEETY_-p Q6UWV2;S229-p RCAECLDSDYEETY_ 0.79813572883131 0.364472268081082 -0.0483333333333333 0.173666666666667 1.88944355736687 5.81050209371185 -0.0483333333333334 0.173666666666667 0.647225536629688 0.26239151714739 -0.484176897540534 1.25044283397904 Q6UWV2 MPZL3 Q6UWV2.S229.p_MPZL3 Q6UWV2_S229s _1_1_229_229 Q6UWV2 Q6UWV2|Q6UWV2-2 Myelin protein zero-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17534.17534.2 8.73 8.73 3.373 4 1 1 0 982.3617 1883.7513 S229s TMT10 223 (R) CAECLDsDYEETY (-) CAECLDS(0.99)DY(0.0)EET(0.0)Y(0.0) C:Carbamidomethylation,s:Phosphorylated S MPZL3 26387.6 1 2 3431.1 51.22 HUMAN 1 -1.8894 5.8105 RCAPSAGSPAAAVGR-p Q7L2J0;S60-p RCAPSAGSPAAAVGR 0.248491641321601 0.0611776029234564 0.213666666666667 0.215666666666667 11.5498492922451 16.1568880770632 0.213666666666667 0.215666666666667 0.0699866282160729 0.0242276444887266 2.25273527459324 3.09615830061993 Q7L2J0 MEPCE Q7L2J0.S60.p_MEPCE Q7L2J0_S60s _1_1_60_60 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7712.7712.4 27.21 27.21 1.329 7 1 1 0 857.9042 3348.6301 S60s TMT10 54 (R) CAPSAGsPAAAVGRESPGAAATSSSGPQAQQHR (G) CAPS(0.0)AGS(0.99)PAAAVGRES(0.0)PGAAAT(0.0)S(0.0)S(0.0)S(0.0)GPQAQQHR C:Carbamidomethylation,s:Phosphorylated S MEPCE 74981.5 5 1 428.1 317.7 HUMAN 1 11.5498 16.1569 RCATPNISPATSVVQ-p Q9Y597;S612-p RCATPNISPATSVVQ 0.721277042307597 0.0942423049032221 0.0573333333333333 -0.353 2.68181902765981 13.566905202953 0.0573333333333333 -0.353 0.539284697643903 0.0439854945894393 0.65501053083619 -2.61223099541766 Q9Y597 KCTD3 Q9Y597.S612.p_KCTD3 Q9Y597_S612s _1_1_612_612 Q9Y597 Q9Y597|Q9Y597-2 BTB/POZ domain-containing protein KCTD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13880.13904.4 19.25 19.25 2.315 5 1 1 0 596.7987 2304.208 S612s TMT10 606 (R) CATPNIsPATSVVQHSHLR (E) CAT(0.0)PNIS(0.99)PAT(0.0)S(0.0)VVQHS(0.0)HLR C:Carbamidomethylation,s:Phosphorylated S KCTD3 89667 1 7 417.1 320.81 HUMAN 1 2.6818 -13.5669 RCEERSPSFGEDYYG-p P49761;S226-p RCEERSPSFGEDYYG 0.790053523868569 0.384086367915671 -0.0406666666666667 0.0873333333333333 1.97440725729888 5.52351502080841 -0.0406666666666667 0.0873333333333334 0.634686519657283 0.280316394112827 -0.503126855356667 1.19892454530509 P49761 CLK3 P49761.S226.p_CLK3 P49761_S224sS226s_2_2_224_226 P49761 P49761|P49761-1|P49761-3|P49761-2 Dual specificity protein kinase CLK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12717.12717.4 12.67 12.67 3.397 8 2 2 0 791.316 3002.306 S224s S226s TMT10 214 (R) DSDTYRCEERsPsFGEDYYGPSR (S) DS(0.0)DT(0.0)Y(0.0)RCEERS(0.99)PS(0.99)FGEDY(0.0)Y(0.0)GPS(0.0)R C:Carbamidomethylation,s:Phosphorylated S CLK3 74312.5 2 6 2160.1 95.02 HUMAN 1 -1.9744 5.5235 RCFGMLLSPGRNVKN-p Q5R372-3;S348-p RCFGMLLSPGRNVKN 0.259411432378501 0.457346574838441 -0.169333333333333 -0.0966666666666666 11.1273779173468 4.52943094391422 -0.169333333333333 -0.0966666666666667 0.0771369047843195 0.352417045224877 -2.17844003026998 -1.01688207280363 Q5R372 RABGAP1L Q5R372.3.S348.p_RABGAP1L Q5R372-3_S348s _1_1_348_348 Q5R372-3 Q5R372-3|Q5R372-4|Q5R372-2 Isoform 3 of Rab GTPase-activating protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23381.23381.5 9.36 4.58 4.79 3 1 1 0 864.2344 4237.1464 S348s Hydrogen 336 (K) ELAIERCFGMLLsPGRNVKNSDMHLLDMESMGK (S) ELAIERCFGMLLS(0.99)PGRNVKNS(0.0)DMHLLDMES(0.0)MGK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S RABGAP1L 94912.9 1 4 2342.1 87.2 HUMAN 1 -11.1274 -4.5294 RCFTRKYTLPPGVDP-p P04792;T143-p RCFTRKYTLPPGVDP 0.144678447430122 0.0395615477487953 -0.247666666666667 0.321666666666667 17.1363293418541 18.8120391163279 -0.247666666666667 0.321666666666667 0.0193360190742382 0.0131460744766786 -3.28953444224375 3.62537354531167 P04792 HSPB1 P04792.T143.p_HSPB1 P04792_T143t _1_1_143_143 P04792 P04792 Heat shock protein beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28787.28787.4 20.07 17.23 3.87 9 1 1 0 999.2802 3914.144 T143t TMT10 141 (R) KYtLPPGVDPTQVSSSLSPEGTLTVEAPMPK (L) KY(0.0)T(0.99)LPPGVDPT(0.0)QVS(0.0)S(0.0)S(0.0)LS(0.0)PEGT(0.0)LT(0.0)VEAPMPK K:TMT10,t:Phosphorylated T HSPB1 22839.1 2 10 357.1 346.69 HUMAN 1 -17.1363 18.812 RCGLLCPSPASLRGH-p P52746;S1339-p RCGLLCPSPASLRGH 0.574982197764994 0.0558449180233011 0.0903333333333333 -0.233666666666667 4.41986036416104 16.6929777299749 0.0903333333333333 -0.233666666666667 0.361421482999251 0.0214142183676778 0.996582581015905 -3.20002279166205 P52746 ZNF142 P52746.S1339.p_ZNF142 P52746_S1339s _1_1_1339_1339 P52746 P52746 Zinc finger protein 142 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19219.19219.2 11.85 11.85 3.178 2 1 1 0 820.3966 1559.8235 S1339s TMT10 1333 (R) CGLLCPsPASLR (G) CGLLCPS(0.99)PAS(0.0)LR C:Carbamidomethylation,s:Phosphorylated S ZNF142 193410.6 1 3 4103.1 37.63 HUMAN 1 4.4199 -16.693 RCIQVEITPTSSRIS-p Q9BYI3;T306-p RCIQVEITPTSSRIS 0.560051792492857 0.0348316649817464 -0.0766666666666667 -0.272 4.64647028274532 19.6298469396911 -0.0766666666666667 -0.272 0.343046483424933 0.0108896847165056 -1.03885440713869 -3.79648910043839 Q9BYI3 FAM126A Q9BYI3.T306.p_FAM126A Q9BYI3_T306t _1_1_306_306 Q9BYI3 Q9BYI3|Q9BYI3-3 Hyccin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15818.15818.3 8.17 8.17 3.739 4 1 1 0 567.2813 1619.8624 T306t TMT10 300 (R) CIQVEItPTSSR (I) CIQVEIT(0.99)PT(0.0)S(0.0)S(0.0)R C:Carbamidomethylation,t:Phosphorylated T FAM126A 58366.1 1 1 2241.1 92.02 HUMAN 1 -4.6465 -19.6298 RCKQCSCTLHSGAYK-p Q8IY33;T221-p RCKQCSCTLHSGAYK 0.688052891491185 0.0299292656083015 0.0886666666666667 0.796666666666667 3.04921204515577 20.6234250265155 0.0886666666666667 0.796666666666667 0.49554009012689 0.00866278423179228 0.73039021602539 4.01013727758348 Q8IY33 MICALL2 Q8IY33.T221.p_MICALL2 Q8IY33_T221t _1_1_221_221 Q8IY33 Q8IY33|Q8IY33-2|Q8IY33-4 MICAL-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7355.7355.3 11.87 11.87 1.219 4 1 1 0 650.6391 1869.9352 T221t TMT10 217 (K) QCSCtLHSGAYK (A) QCS(0.0)CT(0.99)LHS(0.0)GAY(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MICALL2 98299.3 1 15 387.1 332.82 HUMAN 1 3.0492 20.6234 RCLPTSDSSPEPQQP-p Q9UPN4-2;S416-p RCLPTSDSSPEPQQP 0.743332697084522 0.198008576778493 0.045 0.141666666666667 2.44623666409339 9.25336581667795 0.045 0.141666666666667 0.569346078363632 0.118758148562212 0.605503862528021 1.85154429298141 Q9UPN4 CEP131 Q9UPN4.2.S416.p_CEP131 Q9UPN4-2_S416sS417s_2_2_416_417 Q9UPN4-2 Q9UPN4|Q9UPN4-2|I3L2J8|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24794.24794.4 21.04 21.04 1.341 6 2 2 0 1161.5029 4483.0649 S416s S417s TMT10 410 (R) CLPTSDssPEPQQPPEDRTQDVLAQDAAGDNLEMMAPSR (G) CLPT(0.0)S(0.0)DS(0.99)S(0.99)PEPQQPPEDRT(0.0)QDVLAQDAAGDNLEMMAPS(0.0)R C:Carbamidomethylation,s:Phosphorylated S CEP131 122301.7 2 24 359.1 345.98 HUMAN 1 2.4462 9.2534 RCLRRTVSVPSEGQF-p Q9UJF2-2;S134-p RCLRRTVSVPSEGQF 0.626039464597712 0.77096667967118 0.0726666666666666 0.0286666666666667 3.77818327774128 1.56200894107786 0.0726666666666667 0.0286666666666667 0.418968789713068 0.697909493370823 0.874484360683411 0.409418275377491 Q9UJF2 RASAL2 Q9UJF2.2.S134.p_RASAL2 Q9UJF2-2_S134s _1_1_134_134 Q9UJF2-2 Q9UJF2-2 Isoform 2 of Ras GTPase-activating protein nGAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23282.23282.4 18.56 15.82 1.105 5 1 1 0 863.9434 3372.7728 S134s TMT10 132 (R) TVsVPSEGQFPEYPPEGATKLEVPAER (S) T(0.0)VS(0.99)VPS(0.0)EGQFPEY(0.0)PPEGAT(0.0)KLEVPAER K:TMT10,s:Phosphorylated S RASAL2 145265.6 4 30 281.2 388.28 HUMAN 1 3.7782 1.562 RCMRYNLSAGTIKAV-p Q6P0N0;S671-p RCMRYNLSAGTIKAV 0.993618410078581 0.00443565772038716 -0.00200000000000002 -0.588333333333333 0.0574557720999601 34.5615912553184 -0.00200000000000001 -0.588333333333333 0.986857447141265 0.000349816970579052 -0.0172472481259372 -7.93420675054151 Q6P0N0 MIS18BP1 Q6P0N0.S671.p_MIS18BP1 Q6P0N0_S671s _1_1_671_671 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17805.17805.2 13.14 13.14 2.225 3 1 1 0 752.9132 1424.8513 S671s TMT10 668 (R) YNLsAGTIK (A) Y(0.0)NLS(0.99)AGT(0.0)IK K:TMT10,s:Phosphorylated S MIS18BP1 129996 2 23 54.1 728.39 HUMAN 1 -0.0575 -34.5616 RCPSARGSGDGEMGK-p O60547;S14-p RCPSARGSGDGEMGK 0.420944975696746 0.863879329810438 -0.114666666666667 0.0243333333333334 6.9299198366428 0.896556378725715 -0.114666666666667 0.0243333333333334 0.202772014743277 0.813475283849548 -1.44874038969984 0.24770146921076 O60547 GMDS O60547.S14.p_GMDS O60547_S14s _1_1_14_14 O60547 O60547 GDP-mannose 4,6 dehydratase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5018.5018.4 13.16 13.16 2.113 2 1 1 0 550.7656 2120.0741 S14s TMT10 8 (R) CPSARGsGDGEMGKPR (N) CPS(0.0)ARGS(0.99)GDGEMGKPR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GMDS 42291.3 7 1 4478.1 30.89 HUMAN 1 -6.9299 0.8966 RCPVKQDSVESQLKR-p Q5T8I3;S288-p RCPVKQDSVESQLKR 0.694699286180922 0.0079657699052288 0.055 0.512666666666667 2.96774742449186 29.9288691296476 0.055 0.512666666666667 0.504923120494431 0.00101651335088635 0.713853790143746 6.40039762220899 Q5T8I3 FAM102B Q5T8I3.S288.p_FAM102B Q5T8I3_S288s _1_1_288_288 Q5T8I3 Q5T8I3|Q5T8I3-2 Protein FAM102B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13210.13210.3 14.41 14.41 1.194 2 1 1 0 762.4116 2205.2516 S288s TMT10 282 (R) CPVKQDsVESQLK (R) CPVKQDS(0.99)VES(0.0)QLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM102B 39935.3 2 4 3018.1 63.12 HUMAN 1 2.9677 29.9289 RCQEPFNSITKRRHH-p P98174;S745-p RCQEPFNSITKRRHH 0.228095422318106 0.118189753951508 -0.209333333333333 -0.166 12.3330419229082 12.2300805675705 -0.209333333333333 -0.166 0.0584380623840121 0.0598400493809168 -2.39155007770423 -2.37200185108033 P98174 FGD1 P98174.S745.p_FGD1 P98174_S745s _1_1_745_745 P98174 P98174 FYVE, RhoGEF and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16127.16127.2 13.36 13.36 2.431 2 1 1 0 881.4335 1681.8984 S745s TMT10 739 (R) CQEPFNsITK (R) CQEPFNS(0.99)IT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FGD1 107757.1 1 9 1189.1 168.38 HUMAN 1 -12.333 -12.2301 RCREAAVSASDILQE-p F5H7W8;S198-p RCREAAVSASDILQE 0.202779372132916 0.139869921106974 0.204 0.160666666666667 13.4452033408683 11.2577039890868 0.204 0.160666666666667 0.0452355282125733 0.0748565144382076 2.59160820972839 2.20030097800443 F5H7W8 C12orf43 F5H7W8.S198.p_C12orf43 F5H7W8_S198s _1_1_198_198 F5H7W8 F5H7W8|Q96C57|G5EA44|E7ENF1 Chromosome 12 open reading frame 43, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20870.20870.3 16.15 16.15 1.144 5 1 1 0 883.4406 2568.3354 S198s Hydrogen 194 (R) EAAVsASDILQESAIHSPGTVEK (E) EAAVS(0.99)AS(0.0)DILQES(0.0)AIHS(0.0)PGT(0.0)VEK K:TMT10-Lys-Only,s:Phosphorylated S C12orf43 31921.4 2 4 1296.1 156.8 HUMAN 1 13.4452 11.2577 RCRTLSGSPRPKNFK-p Q8TDN4;S313-p RCRTLSGSPRPKNFK 0.728472563795125 0.0153798538319561 -0.0576666666666667 -0.354666666666667 2.61202310827199 25.0795221478043 -0.0576666666666667 -0.354666666666667 0.548021616213884 0.00310490120016725 -0.640444707505278 -5.05760680886395 Q8TDN4 CABLES1 Q8TDN4.S313.p_CABLES1 Q8TDN4_S313s _1_1_313_313 Q8TDN4 Q8TDN4|Q8TDN4-2 CDK5 and ABL1 enzyme substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5335.5335.2 10.55 4.64 2.31 3 1 1 0 513.7632 946.5519 S313s TMT10 309 (R) TLSGsPR (P) T(0.0)LS(0.0)GS(0.99)PR s:Phosphorylated S CABLES1 68282.3 3 5 1243.1 162.91 HUMAN 1 -2.612 -25.0795 RCSLHSASPASVRSL-p Q9P206-3;S338-p RCSLHSASPASVRSL 0.535658500953587 0.706954151285432 0.085 0.0466666666666667 5.01868197803244 2.06917938242838 0.085 0.0466666666666667 0.314870375590729 0.620986361112889 1.10748058633197 0.52400676269371 Q9P206 KIAA1522 Q9P206.3.S338.p_KIAA1522 Q9P206-3_S338s _1_1_338_338 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5519.5519.2 17.1 17.1 2.182 4 1 1 0 790.8762 1500.779 S338s TMT10 332 (R) CSLHSAsPASVR (S) CS(0.0)LHS(0.0)AS(0.99)PAS(0.0)VR C:Carbamidomethylation,s:Phosphorylated S KIAA1522 108782.6 4 13 62.1 704.36 HUMAN 1 5.0187 2.0692 RCTSHSETPTVDDEE-p O95425-2;T283-p RCTSHSETPTVDDEE 0.307290133537941 0.182300446136055 0.148333333333333 0.219666666666667 9.57903881910535 9.72368188690444 0.146830869908859 0.219666666666667 0.11017831292896 0.106569225938973 1.9086585334449 1.93298455691618 O95425 SVIL O95425.2.T283.p_SVIL O95425-2_T283t _1_1_283_283 O95425-2 O95425-3|O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7373.7373.4 10.77 10.77 1.274 5 1 1 0 693.817 2692.2772 T283t TMT10 277 (R) CTSHSEtPTVDDEEKVDER (A) CT(0.0)S(0.0)HS(0.0)ET(0.99)PT(0.0)VDDEEKVDER C:Carbamidomethylation,K:TMT10,t:Phosphorylated T SVIL 202384.1 1 9 406.2 324.74 HUMAN 1 9.579 9.7237 RCYEEKQSPLQKHLR-p Q9H0A8;S115-p RCYEEKQSPLQKHLR 0.754868620755395 0.188411674756143 -0.056 0.198 2.33428948403964 9.53181177987265 -0.056 0.198 0.584212777855759 0.11138297716756 -0.581623054947873 1.89974381853993 Q9H0A8 COMMD4 Q9H0A8.S115.p_COMMD4 Q9H0A8_S115s _1_1_115_115 Q9H0A8 Q9H0A8|A0A0B4J287|H3BQF2|Q9H0A8-2 COMM domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10778.10778.3 12.52 7.35 9.724 2 1 1 0 726.381 2097.1617 S115s TMT10 109 (R) CYEEKQsPLQK (H) CY(0.0)EEKQS(0.99)PLQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S COMMD4 22106.3 1 1 6295.1 12.52 HUMAN 1 -2.3343 9.5318 RDAEDAIYGRNGYDY-p Q13242;Y70-p RDAEDAIYGRNGYDY 0.213619309408308 0.530785119961937 0.197 0.135666666666667 12.9210438920413 3.6992224558986 0.197 0.135666666666667 0.0510382307174294 0.426655898791661 2.49684914272596 0.859042947971832 Q13242 SRSF9 Q13242.Y70.p_SRSF9 Q13242_Y70y _1_1_70_70 Q13242 Q13242|S4R3G0 Serine/arginine-rich splicing factor 9 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.17667.17667.3 10.36 7.63 99 1 1 1 0 654.9642 1882.9133 Y70y TMT10 59 (R) FEDPRDAEDAIyGR (N) FEDPRDAEDAIY(1.0)GR y:Phosphorylated Y SRSF9 25655.9 1 1 108.1 27.44 HUMAN 1 12.921 3.6992 RDAEQSGSPRTGMGS-p P08651;S194-p RDAEQSGSPRTGMGS 0.705319541148296 0.00969263818820915 -0.07 0.523666666666667 2.85010278009069 28.3570511283574 -0.07 0.523666666666667 0.518787761157469 0.00145980513559153 -0.689798491245565 5.93867339342265 P08651 NFIC P08651.S194.p_NFIC P08651_S194s _1_1_194_194 P08651 A0A286YEX4|P08651|P08651-2|P08651-6|P08651-3|P08651-5 Nuclear factor 1 C-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2787.2787.2 13.33 7.56 2.243 2 1 1 0 628.2789 1175.5854 S194s TMT10 188 (R) DAEQSGsPR (T) DAEQS(0.0)GS(0.99)PR s:Phosphorylated S NFIC 56130.4 3 2 674.1 247.72 HUMAN 1 -2.8501 28.3571 RDAERPPSPRSPLMP-p A6NKF1;S41-p RDAERPPSPRSPLMP 0.893317056675265 0.118381339892844 -0.0293333333333333 0.169333333333333 0.957354659358114 12.219121401763 -0.0293333333333333 0.169333333333333 0.802166524019342 0.0599912429096159 -0.263146816659379 2.37005391755484 A6NKF1 NotFound A6NKF1.S41.p_NotFound A6NKF1_S41s _1_1_41_41 A6NKF1 A6NKF1|A6NKF1-2 SAC3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4555.4555.3 9.57 4.99 99 1 1 1 0 445.2206 1253.68 S41s TMT10 35 (R) DAERPPsPR (S) DAERPPS(1.0)PR s:Phosphorylated S SAC3D1 44179.9 1 1 4138.1 36.83 HUMAN 1 -0.9574 12.2191 RDAKLDKSQIHDIVL-p P11142;S329-p RDAKLDKSQIHDIVL 0.433059789719547 0.179634731949395 0.133333333333333 -0.138333333333333 6.69425614000616 9.8058976352038 0.133333333333333 -0.139809666959121 0.214079157035129 0.104570753277629 1.4073809084125 -1.94723685733077 P11142 HSPA8 P11142.S329.p_HSPA8 P11142_S329s _1_1_329_329 P11142 P11142|E9PKE3|E9PNE6|P11142-2|A8K7Q2 Heat shock cognate 71 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21174.21174.4 18.18 12.83 9.274 3 1 1 0 594.8311 2296.3389 S329s TMT10 326 (K) LDKsQIHDIVLVGGSTR (I) LDKS(0.99)QIHDIVLVGGS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S HSPA8 71125 6 17 367.1 341.38 HUMAN 1 6.6943 -9.8059 RDAQIRDSWLDNIDW-p O95400;S118-p RDAQIRDSWLDNIDW 0.874302893744735 0.610624319156106 -0.0333333333333333 -0.0806666666666667 1.14146296429474 2.91074678864238 -0.0333333333333334 -0.0806666666666667 0.768871394657175 0.511593857141401 -0.308995954106268 -0.702128046268966 O95400 CD2BP2 O95400.S118.p_CD2BP2 O95400_S118s _1_1_118_118 O95400 O95400 CD2 antigen cytoplasmic tail-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29803.29803.3 11.12 6.82 99 1 1 1 0 761.7039 2203.1345 S118s Hydrogen 112 (R) DAQIRDsWLDNIDWVK (I) DAQIRDS(1.0)WLDNIDWVK K:TMT10-Lys-Only,s:Phosphorylated S CD2BP2 37759.9 1 2 852.1 212.12 HUMAN 1 -1.1415 -2.9107 RDDPSDVTDEDEGPA-p Q3YEC7-2;T600-p RDDPSDVTDEDEGPA 0.203968533214827 0.955505632112976 0.197333333333333 -0.00733333333333334 13.3759748668535 0.28216572775272 0.197333333333333 -0.00733333333333335 0.0459623804556806 0.937094582644904 2.57904145789235 -0.0826510031055511 Q3YEC7 RABL6 Q3YEC7.2.T600.p_RABL6 Q3YEC7-2_T600t _1_1_600_600 Q3YEC7-2 Q3YEC7-2 Isoform 2 of Rab-like protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24475.24475.5 17.41 12.52 1.198 2 1 1 0 899.4459 4413.2403 T600t TMT10 586 (R) RADDFPVRDDPSDVtDEDEGPAEPPPPPKLPLPAFR (L) RADDFPVRDDPS(0.0)DVT(0.99)DEDEGPAEPPPPPKLPLPAFR K:TMT10,t:Phosphorylated T RABL6 79919.7 2 6 429.1 317.58 HUMAN 1 13.376 -0.2822 RDEDDDWSSDEF___-p H8Y6P7;S761-p RDEDDDWSSDEF___ 0.880959558381171 0.0533844301144045 0.0233333333333333 0.248 1.08107291677411 16.9700855563917 0.0233333333333333 0.248 0.77963747868054 0.0200905323369495 0.294092879330645 3.25427094899053 H8Y6P7 GCOM1 H8Y6P7.S761.p_GCOM1 H8Y6P7_S761sS762s_2_2_761_762 H8Y6P7 H8Y6P7|P0CAP1-11|Q9BZD3|P0CAP2|P0CAP2-2 GRINL1A combined protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17560.17560.2 8.77 8.77 8.769 3 2 2 0 1226.4658 2291.989 S761s S762s TMT10 750 (R) YREVRDEDDDWssDEF (-) Y(0.0)REVRDEDDDWS(0.99)S(0.99)DEF s:Phosphorylated S GCOM1 88318.6 2 6 2612.1 76.74 HUMAN 1 1.0811 16.9701 RDEDMLYSPELAQRG-p Q9Y2W2;S237-p RDEDMLYSPELAQRG 0.851878330458589 0.251091267227614 0.05 0.132 1.34819810455615 7.90572390717305 0.05 0.132 0.733128646410808 0.161967399476799 0.359075588415868 1.61829528844729 Q9Y2W2 WBP11 Q9Y2W2.S237.p_WBP11 Q9Y2W2_S237s _1_1_237_237 Q9Y2W2 Q9Y2W2 WW domain-binding protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18983.18983.2 15.66 15.66 5.821 2 1 1 0 938.4236 1795.8734 S237s TMT10 231 (R) DEDMLYsPELAQR (G) DEDMLY(0.0)S(0.99)PELAQR s:Phosphorylated S WBP11 69996.4 8 1 1858.1 110.79 HUMAN 1 1.3482 7.9057 RDEIEGLSSDEEH__-p Q6PD74;S310-p RDEIEGLSSDEEH__ 0.862721178211236 0.823310497635034 0.025 -0.0236666666666667 1.25124866692864 1.18310734477674 0.025 -0.0236666666666666 0.749678633602026 0.76153394317018 0.335766041226463 -0.319166390531698 Q6PD74 AAGAB Q6PD74.S310.p_AAGAB Q6PD74_S310sS311s_2_2_310_311 Q6PD74 Q6PD74|Q6PD74-2 Alpha- and gamma-adaptin-binding protein p34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30400.30606.3 17.26 17.26 99 2 2 2 0 951.727 2693.2351 S310s S311s TMT10 294 (K) AFWMAIGGDRDEIEGLssDEEH (-) AFWMAIGGDRDEIEGLS(1.0)S(1.0)DEEH s:Phosphorylated S AAGAB 34935.3 37 3 3745.1 44.06 HUMAN 1 1.2512 -1.1831 RDEKLSKSISFTSES-p Q8IYS0;S239-p RDEKLSKSISFTSES 0.388976173212616 0.184537258531495 -0.134 -0.167 7.58691538988688 9.64699159005742 -0.134 -0.167 0.174304444462661 0.108467802331063 -1.56340789336658 -1.91969504126586 Q8IYS0 GRAMD1C Q8IYS0.S239.p_GRAMD1C Q8IYS0_S239s _1_1_239_239 Q8IYS0 Q8IYS0|E9PHT3 GRAM domain-containing protein 1C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17135.17135.2 11.32 3.74 2.23 6 1 1 0 761.8722 1442.7688 S239s TMT10 239 (K) sISFTSESISR (V) S(0.99)IS(0.0)FT(0.0)S(0.0)ES(0.0)IS(0.0)R s:Phosphorylated S GRAMD1C 76319.1 1 1 5652.1 17.46 HUMAN 1 -7.5869 -9.647 RDELFRRSPRPKGDF-p Q9P2W9;S42-p RDELFRRSPRPKGDF 0.658882278456647 0.698611546022269 -0.079 -0.0456666666666666 3.40072541977583 2.14130087262662 -0.079 -0.0456666666666666 0.457011846687494 0.61075905257413 -0.800692447328497 -0.539807287590836 Q9P2W9 STX18 Q9P2W9.S42.p_STX18 Q9P2W9_S42s _1_1_42_42 Q9P2W9 Q9P2W9|D6RF48 Syntaxin-18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14731.14731.5 18.25 18.25 4.125 2 1 1 0 627.7466 3054.7325 S42s TMT10 22 (K) ALGVAVGGGVDGSRDELFRRsPRPK (G) ALGVAVGGGVDGS(0.0)RDELFRRS(0.99)PRPK K:TMT10,s:Phosphorylated S STX18 38844 2 2 2491.1 81.28 HUMAN 1 -3.4007 -2.1413 RDERETVSPPCFDEY-p Q13029;S796-p RDERETVSPPCFDEY 0.267348209301553 0.108320782642705 0.197333333333333 0.255333333333333 10.8568364074472 12.7524744534178 0.197333333333333 0.255333333333333 0.082094934228128 0.0530582051564627 2.13104670593409 2.46523645055346 Q13029 PRDM2 Q13029.S796.p_PRDM2 Q13029_S796s _1_1_796_796 Q13029 Q13029|Q13029-2|Q13029-3|Q13029-5 PR domain zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20234.20234.3 16.24 12.61 2.061 3 1 1 0 670.6507 1929.9668 S796s TMT10 793 (R) ETVsPPCFDEYK (M) ET(0.0)VS(0.99)PPCFDEY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRDM2 191251.2 4 4 1106.1 176.67 HUMAN 1 10.8568 12.7525 RDESRGRSSFYPDGG-p Q9NYF8;S319-p RDESRGRSSFYPDGG 0.131896959320692 0.00550441818666763 0.262666666666667 1.12566666666667 18.1697925189604 32.7687583640306 0.262666666666667 1.12566666666667 0.0152412556605177 0.000528596354416953 3.49670985094853 7.30779128215271 Q9NYF8 BCLAF1 Q9NYF8.S319.p_BCLAF1 Q9NYF8_S319s _1_1_319_319 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10471.10471.3 15.23 15.23 1.192 4 1 1 0 751.6918 2173.0926 S319s TMT10 317 (R) GRsSFYPDGGDQETAK (T) GRS(0.99)S(0.0)FY(0.0)PDGGDQET(0.0)AK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 1 14 10.1 1293.04 HUMAN 1 18.1698 32.7688 RDEYEYVSDDGELKI-p O75151;S681-p RDEYEYVSDDGELKI 0.128023476673973 0.00407150998788187 -0.449333333333333 0.875333333333333 18.4913020599012 35.2080424482733 -0.449333333333333 0.875333333333333 0.0141536937392127 0.000301436442150811 -3.56238680239599 8.17111749679739 O75151 PHF2 O75151.S681.p_PHF2 O75151_S681s _1_1_681_681 O75151 O75151 Lysine-specific demethylase PHF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20595.20595.5 19.93 15.9 9.2 3 1 1 0 876.4613 4298.3002 S681s TMT10 667 (K) EDKPKPVRDEYEYVsDDGELKIDEFPIR (R) EDKPKPVRDEY(0.0)EY(0.0)VS(0.99)DDGELKIDEFPIR K:TMT10,s:Phosphorylated S PHF2 121742.7 2 6 376.2 336.84 HUMAN 1 -18.4913 35.208 RDFGKRLSLDSSLVE-p O14513;S17-p RDFGKRLSLDSSLVE 0.634663070490488 0.0419339431740207 -0.0666666666666667 0.253 3.67876198131363 18.4600109902404 -0.0666666666666667 0.253 0.428670701711309 0.0142560398596935 -0.855204013595934 3.55296543819656 O14513 NCKAP5 O14513.S17.p_NCKAP5 O14513_S17s _1_1_17_17 O14513 O14513|O14513-2|O14513-4 Nck-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.25516.25516.3 10.2 10.2 1.169 5 1 1 0 799.0722 2315.2317 S17s TMT10 15 (K) RLsLDSSLVEYMDSNK (Y) RLS(0.99)LDS(0.0)S(0.0)LVEY(0.0)MDS(0.0)NK K:TMT10,s:Phosphorylated S NCKAP5 210359.1 2 1 4560.1 29.87 HUMAN 1 -3.6788 18.46 RDFRRQLSIDTRPFR-p O95071;S2369-p RDFRRQLSIDTRPFR 0.817865312187549 0.0932747981632759 0.0346666666666667 0.244666666666667 1.67945773284355 13.6256842331605 0.0346666666666667 0.244666666666667 0.679288444382634 0.0433941890493679 0.436584414026251 2.62292404017188 O95071 UBR5 O95071.S2369.p_UBR5 O95071_S2369s _1_1_2369_2369 O95071 O95071|O95071-2|E7EMW7|E7ET84 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15943.15943.4 9.98 9.98 2.157 4 1 1 0 852.9218 3328.6872 S2369s TMT10 2367 (R) QLsIDTRPFRPASEGNPSDDPEPLPAHR (Q) QLS(0.99)IDT(0.0)RPFRPAS(0.0)EGNPS(0.0)DDPEPLPAHR s:Phosphorylated S UBR5 312542 1 25 80.1 636.57 HUMAN 1 1.6795 13.6257 RDGFRRKSFYSSHYA-p F8W0Q9;S128-p RDGFRRKSFYSSHYA 0.421331766603856 0.072891332009289 0.119333333333333 -0.199333333333333 6.91258683866291 15.1073885793567 0.119333333333333 -0.199333333333333 0.203582909196237 0.0308504243428553 1.44570315954925 -2.8967095147232 F8W0Q9 NotFound F8W0Q9.S128.p_NotFound F8W0Q9_S128s _1_1_128_128 F8W0Q9 Q8NEY8|Q8NEY8-3|F8W0Q9|Q8NEY8-2|Q8NEY8-8|F8W6A0|Q8NEY8-9|B7Z8L1|Q8NEY8-6|F8WF16|Q8NEY8-5 Periphilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8225.8225.3 15.33 15.33 1.293 5 1 1 0 476.2166 1346.6691 S128s TMT10 128 (K) sFYSSHYAR (E) S(0.99)FY(0.0)S(0.0)S(0.0)HY(0.0)AR s:Phosphorylated S PPHLN1 44796.3 3 3 663.1 251.09 HUMAN 1 6.9126 -15.1074 RDGGERISMPLDFKH-p Q16584;S493-p RDGGERISMPLDFKH 0.0476372614756949 0.00228635428030843 -0.575666666666667 -0.933666666666667 29.3775481102102 40.7434451096443 -0.575666666666667 -0.933666666666667 0.00115410464504184 8.42666034406404e-05 -6.24495408805901 -10.470863162859 Q16584 MAP3K11 Q16584.S493.p_MAP3K11 Q16584_S493s _1_1_493_493 Q16584 Q16584 Mitogen-activated protein kinase kinase kinase 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22336.22336.3 11.25 11.25 99 1 1 1 0 668.3412 1923.041 S493s TMT10 487 (R) DGGERIsMPLDFK (H) DGGERIS(1.0)MPLDFK K:TMT10,s:Phosphorylated S MAP3K11 93313.9 1 3 536.1 278.53 HUMAN 1 -29.3775 -40.7434 RDGGTFISDADDVVS-p Q96ST2;S554-p RDGGTFISDADDVVS 0.790665384129587 0.679516797990593 -0.039 0.0466666666666667 1.96969937066064 2.29346131035665 -0.039 0.0466666666666667 0.635374912546213 0.589730879574507 -0.502081243743748 0.572782907688796 Q96ST2 IWS1 Q96ST2.S554.p_IWS1 Q96ST2_S554s _1_1_554_554 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.37068.37068.3 20.04 16.38 5.175 3 1 1 0 826.7443 2398.2576 S554s TMT10 548 (R) DGGTFIsDADDVVSAMIVK (M) DGGT(0.0)FIS(0.99)DADDVVS(0.0)AMIVK K:TMT10,s:Phosphorylated S IWS1 92010 6 11 230.1 422.87 HUMAN 1 -1.9697 2.2935 RDGPEPPSPAKTHCV-p Q9H4Z2;S976-p RDGPEPPSPAKTHCV 0.388413834098731 0.00423666321237395 -0.201 -0.597 7.59884810863737 34.9020912414129 -0.201 -0.597 0.173826181163942 0.000323437875637605 -1.56548362006303 -8.05823913281419 Q9H4Z2 ZNF335 Q9H4Z2.S976.p_ZNF335 Q9H4Z2_S976s _1_1_976_976 Q9H4Z2 Q9H4Z2|Q9H4Z2-2 Zinc finger protein 335 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7790.7790.2 12.88 12.88 99 1 1 1 0 652.3102 1223.6469 S976s Hydrogen 970 (R) DGPEPPsPAK (T) DGPEPPS(1.0)PAK K:TMT10-Lys-Only,s:Phosphorylated S ZNF335 146887.1 3 1 2340.1 87.22 HUMAN 1 -7.5988 -34.9021 RDGYSYGSRSGGGGY-p Q13247;S84-p RDGYSYGSRSGGGGY 0.64722232097896 0.527727388660262 0.0676666666666667 0.0643333333333334 3.54046002545097 3.7312894028102 0.0676666666666667 0.0643333333333334 0.442541493771898 0.423517206830268 0.82820150836553 0.865264262540784 Q13247 SRSF6 Q13247.S84.p_SRSF6 Q13247_S84s _1_1_84_84 Q13247 Q13247|Q13247-3|Q13247-2 Serine/arginine-rich splicing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6223.6223.2 7.32 7.32 4.089 4 1 1 0 607.2584 1133.5425 S84s TMT10 78 (R) DGYSYGsR (S) DGY(0.0)S(0.0)Y(0.0)GS(0.99)R s:Phosphorylated S SRSF6 39700.2 1 17 743.1 233.79 HUMAN 1 3.5405 3.7313 RDIIDYESDVEPETK-p Q5FWF4;S569-p RDIIDYESDVEPETK 0.376518154999368 0.219515133337587 0.140333333333333 -0.133 7.84572759958715 8.6687265367522 0.140333333333333 -0.133 0.164220450825797 0.135871179746553 1.60838660089445 -1.7504141391145 Q5FWF4 ZRANB3 Q5FWF4.S569.p_ZRANB3 Q5FWF4_S569s _1_1_569_569 Q5FWF4 Q5FWF4|Q5FWF4-3|F5GYN7|Q5FWF4-2 DNA annealing helicase and endonuclease ZRANB3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21350.21350.3 16.55 16.55 5.828 3 1 1 0 731.0209 2111.0796 S569s TMT10 563 (R) DIIDYEsDVEPETK (R) DIIDY(0.0)ES(0.99)DVEPET(0.0)K K:TMT10,s:Phosphorylated S ZRANB3 124900.4 3 1 4469.1 30.95 HUMAN 1 7.8457 -8.6687 RDIKWDFTPCKNLRV-p P38606;T136-p RDIKWDFTPCKNLRV 0.794871010698842 0.440627007009389 -0.0513333333333333 0.095 1.92601991011437 4.74094851692755 -0.0513333333333333 0.095 0.641797482173782 0.335664295780385 -0.492355566307891 1.05616020478749 P38606 ATP6V1A P38606.T136.p_ATP6V1A P38606_T136t _1_1_136_136 P38606 P38606|P38606-2 V-type proton ATPase catalytic subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22411.22411.3 16.35 12.82 99 1 1 1 0 693.0317 1997.1133 T136t TMT10 130 (R) DIKWDFtPCK (N) DIKWDFT(1.0)PCK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ATP6V1A 68702.3 2 1 4072.1 38.14 HUMAN 1 -1.926 4.7409 RDIVEELSALKQLTQ-p P46013;S2135-p RDIVEELSALKQLTQ 0.764790724423398 0.0182792288756296 -0.0573333333333333 -0.487333333333333 2.23551715328035 23.9237666460001 -0.0573333333333334 -0.487333333333333 0.597651872697712 0.00405156989436112 -0.560349588110955 -4.77064024021352 P46013 MKI67 P46013.S2135.p_MKI67 P46013_S2135s _1_1_2135_2135 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27689.27689.2 13.53 13.53 99 1 1 1 0 827.9552 1574.9405 S2135s TMT10 2129 (R) DIVEELsALK (Q) DIVEELS(1.0)ALK K:TMT10,s:Phosphorylated S MKI67 360912.4 3 72 5.1 1918.46 HUMAN 1 -2.2355 -23.9238 RDKILGATIENSRIV-p P08727;T145-p RDKILGATIENSRIV 0.267970495769602 0.170911267603941 -0.177 0.153333333333333 10.8394097737364 10.0865275660073 -0.177 0.153333333333333 0.0824250126801307 0.0980273457121609 -2.12799841190081 1.99593233120976 P08727 KRT19 P08727.T145.p_KRT19 P08727_T145t _1_1_145_145 P08727 P08727 Keratin, type I cytoskeletal 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16453.16453.2 12.42 7.78 4.825 2 1 1 0 691.8658 1302.7579 T145t TMT10 141 (K) ILGAtIENSR (I) ILGAT(0.99)IENS(0.0)R t:Phosphorylated T KRT19 44105.2 1 12 383.1 334.07 HUMAN 1 -10.8394 10.0865 RDKKKGRSPDELPSA-p A0A0G2JH68;S22-p RDKKKGRSPDELPSA 0.369943419338104 0.072907361558901 -0.134333333333333 -0.217333333333333 8.00830513360799 15.1051527106092 -0.134333333333333 -0.217333333333333 0.158186525346137 0.0308663110882142 -1.63660130468239 -2.89628979209346 A0A0G2JH68 NotFound A0A0G2JH68.S22.p_NotFound A0A0G2JH68_S22s _1_1_22_22 A0A0G2JH68 O60610|A0A0G2JH68|O60610-3|A0A140T8Z0|O60610-2|B4E2I7 Protein diaphanous homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8600.8600.3 18.88 18.88 7.93 2 1 1 0 680.0056 1958.0343 S22s TMT10 20 (K) GRsPDELPSAGGDGGK (S) GRS(0.99)PDELPS(0.0)AGGDGGK K:TMT10,s:Phosphorylated S DIAPH1 142040.6 6 1 2810.1 69.79 HUMAN 1 -8.0083 -15.1052 RDKPRSTSPAGQHHS-p Q5T200;S318-p RDKPRSTSPAGQHHS 0.0922043466391237 0.0144840230392695 0.448666666666667 0.546666666666667 22.0518515523656 25.4830340518933 0.448666666666667 0.546666666666667 0.0062346897174008 0.00282941463008578 4.33379650376167 5.16056013037404 Q5T200 ZC3H13 Q5T200.S318.p_ZC3H13 Q5T200_S318sS325s_2_2_318_325 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3037.3037.3 7.96 7.96 1.103 6 2 2 0 570.2337 1548.7513 S318s S325s Hydrogen 316 (R) STsPAGQHHsPISSR (H) S(0.0)T(0.0)S(0.99)PAGQHHS(0.99)PIS(0.0)S(0.0)R s:Phosphorylated S ZC3H13 197316.7 3 35 24.1 987.82 HUMAN 1 22.0519 25.483 RDLELPLSPSLLGGP-p P19419;S324-p RDLELPLSPSLLGGP 0.257173550014472 0.0220642689874756 -0.171 -0.328 11.2046902104544 22.6275969464532 -0.171 -0.328 0.0757758783144339 0.00546059925318017 -2.19200882498245 -4.4620463552158 P19419 ELK1 P19419.S324.p_ELK1 P19419_S324s _1_1_324_324 P19419 P19419 ETS domain-containing protein Elk-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32680.32680.3 15.56 15.56 2.251 2 1 1 0 719.3782 2076.1538 S324s TMT10 318 (R) DLELPLsPSLLGGPGPER (T) DLELPLS(0.99)PS(0.0)LLGGPGPER s:Phosphorylated S ELK1 45058.3 3 3 2715.1 72.98 HUMAN 1 -11.2047 -22.6276 RDLRAEFSAGAWSEP-p Q8N6S5;S60-p RDLRAEFSAGAWSEP 0.98609608686731 0.180624739981569 0.00299999999999999 -0.139333333333333 0.123106109827725 9.77582329428058 0.003 -0.139333333333333 0.972051755699737 0.105297405537551 0.0366846593472798 -1.94202273300683 Q8N6S5 ARL6IP6 Q8N6S5.S60.p_ARL6IP6 Q8N6S5_S60s _1_1_60_60 Q8N6S5 Q8N6S5 ADP-ribosylation factor-like protein 6-interacting protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19895.19895.3 14.31 9.92 2.176 2 1 1 0 667.6541 1920.9765 S60s TMT10 54 (R) DLRAEFsAGAWSEPR (K) DLRAEFS(0.99)AGAWS(0.0)EPR s:Phosphorylated S ARL6IP6 24961.1 1 5 1404.1 146.21 HUMAN 1 0.1231 -9.7758 RDLSYCLSGMYDHRY-p P52597;S269-p RDLSYCLSGMYDHRY 0.508518592067906 0.112553955980954 -0.0953333333333333 0.195333333333333 5.41999254431728 12.5120822531299 -0.0953333333333334 0.195333333333333 0.287078551039667 0.056077904240875 -1.18049749944419 2.42223735278561 P52597 HNRNPF P52597.S269.p_HNRNPF P52597_S269s _1_1_269_269 P52597 P52597 Heterogeneous nuclear ribonucleoprotein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18838.18838.3 13.69 13.69 4.106 4 1 1 0 642.6107 1845.8461 S269s TMT10 263 (R) DLSYCLsGMYDHR (Y) DLS(0.0)Y(0.0)CLS(0.99)GMY(0.0)DHR C:Carbamidomethylation,s:Phosphorylated S HNRNPF 46013.4 1 15 990.1 191.56 HUMAN 1 -5.42 12.5121 RDLVMGSSPQLKRSV-p Q53LP3;S213-p RDLVMGSSPQLKRSV 0.219245224336186 0.285277106289853 -0.186666666666667 -0.124666666666667 12.6896997083721 7.18588954524616 -0.186666666666667 -0.124666666666667 0.0538307002307075 0.191166172769537 -2.45529991753823 -1.49309102408556 Q53LP3 SOWAHC Q53LP3.S213.p_SOWAHC Q53LP3_S213s _1_1_213_213 Q53LP3 Q53LP3 Ankyrin repeat domain-containing protein SOWAHC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21043.21043.3 13.58 8.48 1.426 2 1 1 0 742.0698 2144.2262 S213s TMT10 203 (R) QNLRDLVMGSsPQLK (R) QNLRDLVMGS(0.0)S(0.99)PQLK K:TMT10,s:Phosphorylated S SOWAHC 55956.3 16 2 2600.1 77.13 HUMAN 1 -12.6897 -7.1859 RDLYRSGYGFNEPEQ-p Q5BKZ1;Y93-p RDLYRSGYGFNEPEQ 0.0431670381948327 0.00202201743890692 -0.752 -1.031 30.2465191958999 42.1103342361017 -0.752 -1.031 0.000944817829996755 6.15129530084881e-05 -6.50747961577155 -11.1225219938697 Q5BKZ1 ZNF326 Q5BKZ1.Y93.p_ZNF326 Q5BKZ1_Y93y _1_1_93_93 Q5BKZ1 Q5BKZ1 DBIRD complex subunit ZNF326 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.9828.9873.2 17.19 10.34 1.28 3 1 1 0 840.3661 1599.7601 Y93y TMT10 91 (R) SGyGFNEPEQSR (F) S(0.0)GY(0.99)GFNEPEQS(0.0)R y:Phosphorylated Y ZNF326 65995 2 2 103.1 28.34 HUMAN 1 -30.2465 -42.1103 RDMANRISAFGYLEC-p P08134;S152-p RDMANRISAFGYLEC 0.556318909489347 0.965184778830359 0.0923333333333333 -0.00600000000000001 4.70241835807792 0.220370763886485 0.0923333333333334 -0.00600000000000003 0.338655524133673 0.95052364252535 1.04923123774947 -0.0649732212899865 P08134 RHOC P08134.S152.p_RHOC P08134_S152s _1_1_152_152 P08134 P08134 Rho-related GTP-binding protein RhoC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22453.22453.3 18 18 3.827 3 1 1 0 748.013 2162.0572 S152s Hydrogen 146 (R) DMANRIsAFGYLECSAK (T) DMANRIS(0.99)AFGY(0.0)LECS(0.0)AK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S RHOC 22348.3 3 1 4323.1 33.59 HUMAN 1 4.7024 -0.2204 RDMITRRSLGYAYVN-p Q13310-2;S51-p RDMITRRSLGYAYVN 0.51015581259786 0.340290930008732 0.122 0.1 5.4009137536389 6.20100122712882 0.122 0.1 0.288342476802461 0.239827995326392 1.1770466607961 1.31996841527357 Q13310 PABPC4 Q13310.2.S51.p_PABPC4 Q13310-2_S51s _1_1_51_51 Q13310-2 Q13310-3|P11940|Q13310-2|B1ANR0 Isoform 2 of Polyadenylate-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22212.22212.3 20.86 20.86 1.94 3 1 1 0 746.6861 2158.0766 S51s TMT10 51 (R) sLGYAYVNFQQPADAER (A) S(0.99)LGY(0.0)AY(0.0)VNFQQPADAER s:Phosphorylated S PABPC4 69805.6 1 6 1996.1 103.46 HUMAN 1 5.4009 6.201 RDNLAQQSFNMEQAN-p Q9NZZ3;S86-p RDNLAQQSFNMEQAN 0.167516061063847 0.169808560434942 -0.333333333333333 0.154 15.5008070646906 10.1247341901906 -0.333333333333333 0.154 0.0281785922992674 0.0971687421857111 -2.97291634018833 2.00256839701453 Q9NZZ3 CHMP5 Q9NZZ3.S86.p_CHMP5 Q9NZZ3_S86s _1_1_86_86 Q9NZZ3 Q9NZZ3|Q9NZZ3-2 Charged multivesicular body protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27408.27408.3 19.35 17.92 4.608 4 1 1 0 994.4854 2901.4817 S86s TMT10 80 (R) DNLAQQsFNMEQANYTIQSLK (D) DNLAQQS(0.99)FNMEQANY(0.0)T(0.0)IQS(0.0)LK K:TMT10,s:Phosphorylated S CHMP5 24627.4 4 2 2366.1 86.45 HUMAN 1 -15.5008 10.1247 RDNPFFRSKRSYSLS-p Q9P0V3;S241-p RDNPFFRSKRSYSLS 0.630943216429157 0.0368850339996155 0.104 0.407666666666667 3.72170201601267 19.2744499542066 0.104 0.407666666666667 0.424453186584978 0.0118182998505379 0.863544297395564 3.72161827123083 Q9P0V3 SH3BP4 Q9P0V3.S241.p_SH3BP4 Q9P0V3_S241s _1_1_241_241 Q9P0V3 Q9P0V3|Q9P0V3-2 SH3 domain-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15829.15829.3 11.95 4.02 99 1 1 1 0 516.9377 1468.8313 S241s TMT10 235 (R) DNPFFRsK (R) DNPFFRS(1.0)K K:TMT10,s:Phosphorylated S SH3BP4 108463.7 1 9 782.1 225.91 HUMAN 1 3.7217 19.2744 RDPAQPMSPGEATQS-p Q9BQG0-2;S11-p RDPAQPMSPGEATQS 0.395785791392469 0.239421362588105 -0.143666666666667 -0.187 7.42766931152094 8.17932895076257 -0.143666666666667 -0.187 0.180814422590626 0.152078249497784 -1.53568609213714 -1.66571535421033 Q9BQG0 MYBBP1A Q9BQG0.2.S11.p_MYBBP1A Q9BQG0-2_S11s _1_1_11_11 Q9BQG0-2 Q9BQG0-2 Isoform 2 of Myb-binding protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6453.6453.2 18.69 13.01 3.866 3 1 1 0 1109.9817 2138.9884 S11s Hydrogen 5 (R) DPAQPMsPGEATQSGARPADR (Y) DPAQPMS(0.99)PGEAT(0.0)QS(0.0)GARPADR s:Phosphorylated S MYBBP1A 150334.3 25 1 297.1 378.74 HUMAN 1 -7.4277 -8.1793 RDPGMVRSPQNQYPA-p P33993;S121-p RDPGMVRSPQNQYPA 0.147946322560902 0.473349491362873 0.283 0.072 16.8324556264391 4.32969633522616 0.283 0.072 0.0207374063304449 0.369003398901716 3.22970792694418 0.979473590169322 P33993 MCM7 P33993.S121.p_MCM7 P33993_S121s _1_1_121_121 P33993 P33993|P33993-2 DNA replication licensing factor MCM7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15611.15611.3 15.49 15.49 6.887 2 1 1 0 723.6586 2088.9954 S121s Hydrogen 115 (R) DPGMVRsPQNQYPAELMR (R) DPGMVRS(0.99)PQNQY(0.0)PAELMR s:Phosphorylated S MCM7 81934.1 3 1 1064.1 181.73 HUMAN 1 16.8325 4.3297 RDPGPAQSPDVHWMG-p P59923;S150-p RDPGPAQSPDVHWMG 0.840299429548807 0.358059564691188 0.034 0.125666666666667 1.45972744940469 5.9175725858133 0.034 0.125666666666667 0.714541167195493 0.256001636414109 0.385527571177158 1.26956774544035 P59923 ZNF445 P59923.S150.p_ZNF445 P59923_S150s _1_1_150_150 P59923 P59923 Zinc finger protein 445 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21058.21058.4 19.07 19.07 4.975 4 1 1 0 808.6268 3151.5217 S150s TMT10 136 (R) DLDGTSWRDPGPAQsPDVHWMGTGALR (S) DLDGT(0.0)S(0.0)WRDPGPAQS(0.99)PDVHWMGT(0.0)GALR s:Phosphorylated S ZNF445 121357 1 9 2565.2 78.32 HUMAN 1 1.4597 5.9176 RDPQLEGSLSRVKAQ-p K7EKI0;S993-p RDPQLEGSLSRVKAQ 0.531734774301321 0.316679314942699 -0.104 -0.186 5.07634529417273 6.59877120701195 -0.104 -0.186 0.310717325878724 0.218838071689355 -1.11803055870336 -1.39021850943896 K7EKI0 EVPL K7EKI0.S993.p_EVPL K7EKI0_S993s _1_1_993_993 K7EKI0 K7EKI0|Q92817 Envoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20422.20422.4 13.96 13.96 1.145 3 1 1 0 698.1243 2709.4976 S993s TMT10 980 (K) EVVEFYRDPQLEGsLSRVK (A) EVVEFY(0.0)RDPQLEGS(0.99)LS(0.0)RVK K:TMT10,s:Phosphorylated S EVPL 235195.7 1 6 1436.1 142.57 HUMAN 1 -5.0763 -6.5988 RDPRDNGSRSGDLPY-p Q86X29-6;S423-p RDPRDNGSRSGDLPY 0.0521538298795559 0.0335413266484082 0.479 0.428333333333333 27.8665370719622 19.8733455326199 0.476334760533976 0.428333333333333 0.0016343546116004 0.0102959268117133 5.80837518741118 3.84824963709535 Q86X29 LSR Q86X29.6.S423.p_LSR Q86X29-6_S423sS425s_2_2_423_425 Q86X29-6 Q86X29-2|Q86X29-5|Q86X29-6 Isoform 6 of Lipolysis-stimulated lipoprotein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6431.6431.2 9.22 9.22 3.404 3 2 2 0 834.8062 1508.6724 S423s S425s Hydrogen 420 (R) DNGsRsGDLPYDGR (L) DNGS(0.99)RS(0.99)GDLPY(0.0)DGR s:Phosphorylated S LSR 54725.6 2 19 206.1 448.79 HUMAN 1 27.8665 19.8733 RDPSLRKSGVGNIFI-p P11940;S96-p RDPSLRKSGVGNIFI 0.0807170651382237 0.659976116877198 -0.96 -0.057 23.3363087411924 2.46918816829532 -0.96 -0.057 0.00463840990994869 0.566345146698066 -4.63438366653 -0.610293359841944 P11940 PABPC1 P11940.S96.p_PABPC1 P11940_S96s _1_1_96_96 P11940 P11940|Q4VXU2|E7EQV3|P11940-2|A0A087WTT1|Q96DU9 Polyadenylate-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23656.23656.3 12.21 7.23 99 1 1 1 0 491.6146 1392.8615 S96s TMT10 96 (K) sGVGNIFIK (N) S(1.0)GVGNIFIK K:TMT10,s:Phosphorylated S PABPC1 70897.8 1 1 1996.2 103.46 HUMAN 1 -23.3363 -2.4692 RDPSLRKSGVGNVFI-p Q13310-2;S96-p RDPSLRKSGVGNVFI 0.072097360428574 0.985017746020059 -0.705666666666667 -0.00266666666666665 24.615129793253 0.0971222172956844 -0.705666666666667 -0.00266666666666665 0.00345531002883653 0.977884986112968 -4.94695677985587 -0.0290224710645001 Q13310 PABPC4 Q13310.2.S96.p_PABPC4 Q13310-2_S96s _1_1_96_96 Q13310-2 Q13310-3|Q13310-2|B1ANR0|Q5JQF8 Isoform 2 of Polyadenylate-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21491.21491.3 9.57 9.57 99 1 1 1 0 486.9428 1378.8459 S96s TMT10 96 (K) sGVGNVFIK (N) S(1.0)GVGNVFIK K:TMT10,s:Phosphorylated S PABPC4 69805.6 1 7 1996.1 103.46 HUMAN 1 -24.6151 -0.0971 RDPYALRSVRHLIDN-p J3KNN3;S349-p RDPYALRSVRHLIDN 0.257610758129902 0.0763317316243298 -0.165333333333333 0.278 11.191184342319 14.827026779172 -0.165333333333333 0.278 0.0760118960510625 0.0329076842874593 -2.18963761619099 2.84424262887239 J3KNN3 NotFound J3KNN3.S349.p_NotFound J3KNN3_S349s _1_1_349_349 J3KNN3 J3KNN3|P15735|P15735-2 Phosphorylase b kinase gamma catalytic chain, liver/testis isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15173.15173.4 13.97 11.24 7.064 2 1 1 0 489.0215 1873.0969 S349s TMT10 338 (K) NALLRDPYALRsVR (H) NALLRDPY(0.0)ALRS(0.99)VR s:Phosphorylated S PHKG2 47285.3 5 3 3238.1 56.2 HUMAN 1 -11.1912 14.827 RDQARDSSFERRHGE-p Q5T200;S621-p RDQARDSSFERRHGE 0.409041787828506 0.784997486043184 -0.127333333333333 0.0296666666666667 7.15827215552906 1.4576057114271 -0.127333333333333 0.0296666666666667 0.192385698488904 0.714890340300595 -1.48869047224761 0.384987208545207 Q5T200 ZC3H13 Q5T200.S621.p_ZC3H13 Q5T200_S621s _1_1_621_621 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4692.4692.2 7.79 2.33 1.128 2 1 1 0 603.2797 1125.585 S621s TMT10 619 (R) DSsFERR (H) DS(0.0)S(0.99)FERR s:Phosphorylated S ZC3H13 197316.7 2 12 24.1 987.82 HUMAN 1 -7.1583 1.4576 RDQHHLGSPSRLSVG-p Q9H8M2;S566-p RDQHHLGSPSRLSVG 0.157246543795891 0.522156577521319 0.535 -0.11 16.1152633622454 3.7924935416329 0.535 -0.11 0.0244609693681563 0.417590534363777 3.09035344223416 -0.877107790290498 Q9H8M2 BRD9 Q9H8M2.S566.p_BRD9 Q9H8M2_S566s _1_1_566_566 Q9H8M2 Q9H8M2|Q9H8M2-6|Q9H8M2-1|Q9H8M2-3|Q9H8M2-2 Bromodomain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5961.5961.5 17.58 17.58 1.258 9 1 1 0 646.7126 3149.5634 S566s TMT10 542 (R) GGSRPSSNLSSLSNASERDQHHLGsPSR (L) GGS(0.0)RPS(0.0)S(0.0)NLS(0.0)S(0.0)LS(0.0)NAS(0.0)ERDQHHLGS(0.99)PS(0.0)R s:Phosphorylated S BRD9 67341.2 4 5 1044.1 184.76 HUMAN 1 16.1153 -3.7925 RDQHLNNSSSSPQRS-p E7ETA6;S428-p RDQHLNNSSSSPQRS 0.92169646709418 0.00519854373998719 -0.017 -0.585333333333333 0.693993062365906 33.2203668034949 -0.017 -0.585333333333333 0.85231610303903 0.000476390749321728 -0.195254270525468 -7.46147169676839 E7ETA6 PCM1 E7ETA6.S428.p_PCM1 E7ETA6_S428s _1_1_428_428 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6|Q15154-3|E9PGW9 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15861.15861.4 19.1 19.1 1.325 5 1 1 0 703.6086 2731.4437 S428s TMT10 413 (K) LLGELHTLRDQHLNNsSSSPQR (S) LLGELHT(0.0)LRDQHLNNS(0.99)S(0.0)S(0.0)S(0.0)PQR s:Phosphorylated S PCM1 229381.8 5 15 13.1 1159.95 HUMAN 1 -0.694 -33.2204 RDRDRDRSRGRSIDQ-p A0A1B0GTW1;S299-p RDRDRDRSRGRSIDQ 0.881500601123495 0.479615981539871 -0.022 0.0746666666666667 1.07718147624106 4.25799721339925 -0.022 0.0746666666666667 0.780336376011203 0.375145964170039 -0.29312809063144 0.96596434355902 A0A1B0GTW1 NotFound A0A1B0GTW1.S299.p_NotFound A0A1B0GTW1_S299s _1_1_299_299 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4002.4002.5 8.89 8.89 8.894 2 1 1 0 494.0377 2386.1922 S299s TMT10 283 (R) GLDHDFGPSRDRDRDRsR (G) GLDHDFGPS(0.0)RDRDRDRS(0.99)R s:Phosphorylated S TJP2 141123.7 2 5 41.1 827.72 HUMAN 1 -1.0772 4.258 RDRDRMNSGAGSGAR-p Q15751;S1406-p RDRDRMNSGAGSGAR 0.00956415249523423 0.000952253650599092 -1.51066666666667 -2.12233333333333 48.281434276757 60.8859129119797 -1.51066666666667 -2.12233333333333 1.48544498648651e-05 8.15471352346626e-07 -14.6091248155686 -25.0571451550288 Q15751 HERC1 Q15751.S1406.p_HERC1 Q15751_S1406s _1_1_1406_1406 Q15751 Q15751 Probable E3 ubiquitin-protein ligase HERC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4232.4232.2 10.92 4.24 2.145 2 1 1 0 608.7714 1136.568 S1406s TMT10 1404 (R) MNsGAGSGAR (A) MNS(0.99)GAGS(0.0)GAR s:Phosphorylated S HERC1 539122.1 1 3 269.1 394.57 HUMAN 1 -48.2814 -60.8859 RDREKTKSLEITGER-p Q5T200;S1240-p RDREKTKSLEITGER 0.224262912799076 0.0408090072299597 -0.192666666666667 0.302666666666667 12.4727326409016 18.6224593069732 -0.192666666666667 0.302666666666667 0.0565883115518308 0.0137326410779248 -2.41647592212833 3.58628812182732 Q5T200 ZC3H13 Q5T200.S1240.p_ZC3H13 Q5T200_S1240s _1_1_1240_1240 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12457.12457.2 11.06 1.6 11.056 2 1 1 0 607.3059 1133.6364 S1240s TMT10 1240 (K) sLEITGER (K) S(0.99)LEIT(0.0)GER s:Phosphorylated S ZC3H13 197316.7 3 26 24.1 987.82 HUMAN 1 -12.4727 18.6225 RDRERASSPPDRIDI-p Q9NWB6;S77-p RDRERASSPPDRIDI 0.332791728499544 0.106373117431212 0.148 0.177333333333333 8.92100215464268 12.8554810729824 0.148 0.177333333333333 0.128203471306956 0.0518145693235062 1.79468789145111 2.48371306950074 Q9NWB6 ARGLU1 Q9NWB6.S77.p_ARGLU1 Q9NWB6_S77s _1_1_77_77 Q9NWB6 Q9NWB6|Q9NWB6-2 Arginine and glutamate-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16123.16123.3 15.57 15.57 1.336 2 1 1 0 504.2397 1430.7387 S77s Hydrogen 75 (R) ASsPPDRIDIFGR (T) AS(0.0)S(0.99)PPDRIDIFGR s:Phosphorylated S ARGLU1 33215.8 22 1 3933.1 40.51 HUMAN 1 8.921 12.8555 RDRFFQGSQEFLASA-p C9J6P4;S257-p RDRFFQGSQEFLASA 0.353945889738641 0.468727450900467 0.128333333333333 0.069 8.38152347133648 4.38647729859935 0.128333333333333 0.069 0.145160231743677 0.364210338997154 1.70128875120953 0.990141190436072 C9J6P4 ZC3HAV1 C9J6P4.S257.p_ZC3HAV1 C9J6P4_S257s _1_1_257_257 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2|Q7Z2W4-3 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.24158.24158.3 22.27 22.27 8.886 4 1 1 0 748.0172 2162.0716 S257s TMT10 253 (R) FFQGsQEFLASASASAER (S) FFQGS(0.99)QEFLAS(0.0)AS(0.0)AS(0.0)AER s:Phosphorylated S ZC3HAV1 115909.2 19 2 361.1 343.37 HUMAN 1 8.3815 4.3865 RDRKNSASAERDRKH-p Q96T37;S724-p RDRKNSASAERDRKH 0.0408130310723349 0.0288840362032124 0.832666666666667 0.316 31.0045695856466 20.8432384922919 0.832666666666667 0.316 0.000793492893237266 0.00823523792201958 6.7436850185108 4.05829755414516 Q96T37 RBM15 Q96T37.S724.p_RBM15 Q96T37_S724s _1_1_724_724 Q96T37 Q96T37|Q96T37-3|Q96T37-2 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3417.3417.3 8.56 5.47 2.58 2 1 1 0 438.8721 1234.6337 S724s TMT10 721 (K) NSAsAERDR (K) NS(0.0)AS(0.99)AERDR s:Phosphorylated S RBM15 107414.9 5 24 55.1 724.11 HUMAN 1 31.0046 20.8432 RDRPVGGSPGGPRLV-p Q8NHG8;S135-p RDRPVGGSPGGPRLV 0.390958401727834 0.190013173716585 -0.254333333333333 -0.243 7.53590020313081 9.48376068078254 -0.254333333333333 -0.243 0.176364016025776 0.112622180597297 -1.55453132932461 -1.89142308663506 Q8NHG8 ZNRF2 Q8NHG8.S135.p_ZNRF2 Q8NHG8_S135s _1_1_135_135 Q8NHG8 Q8NHG8 E3 ubiquitin-protein ligase ZNRF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4381.4381.3 12.81 5.85 99 1 1 1 0 487.5785 1380.7545 S135s TMT10 129 (R) DRPVGGsPGGPR (L) DRPVGGS(1.0)PGGPR s:Phosphorylated S ZNRF2 24627.8 5 4 1463.1 140.17 HUMAN 1 -7.5359 -9.4838 RDRSKARSPYSPAEE-p E9PKC0;S363-p RDRSKARSPYSPAEE 0.303423649713577 0.0988732515027111 -0.148333333333333 -0.194 9.70337000371133 13.2829511802038 -0.148333333333333 -0.194 0.107068815874109 0.0469574907881701 -1.93021862511165 -2.56073872563073 E9PKC0 PLEKHA7 E9PKC0.S363.p_PLEKHA7 E9PKC0_S363s _1_1_363_363 E9PKC0 E9PKC0|Q6IQ23-2 Pleckstrin homology domain-containing family A member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25372.25372.3 18.72 18.72 1.813 4 1 1 0 910.4342 2649.318 S363s TMT10 361 (K) ARsPYSPAEEDALFMDLPTGPR (G) ARS(0.99)PY(0.0)S(0.0)PAEEDALFMDLPT(0.0)GPR s:Phosphorylated S PLEKHA7 144991.9 2 3 809.1 221.2 HUMAN 1 -9.7034 -13.283 RDRSRGRSIDQDYER-p A0A1B0GTW1;S303-p RDRSRGRSIDQDYER 0.911196518625019 0.773735152472509 -0.0256666666666667 -0.042 0.79287366834415 1.54085493746278 -0.0256666666666667 -0.042 0.833129731424861 0.701317225887521 -0.221084317162224 -0.404493365685196 A0A1B0GTW1 NotFound A0A1B0GTW1.S303.p_NotFound A0A1B0GTW1_S303s _1_1_303_303 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3191.3191.2 15.41 15.41 11.092 2 1 1 0 659.7748 1238.576 S303s Hydrogen 301 (R) GRsIDQDYER (A) GRS(0.99)IDQDY(0.0)ER s:Phosphorylated S TJP2 141123.7 6 6 41.1 827.72 HUMAN 1 -0.7929 -1.5409 RDRVRSMSGGHGLRV-p P49815-4;S1132-p RDRVRSMSGGHGLRV 0.556161573711651 0.0511539757869579 -0.108666666666667 -0.367666666666667 4.70463366924338 17.2388372459416 -0.108666666666667 -0.367666666666667 0.338482821950175 0.0188849689627576 -1.04964164949948 -3.30726037900484 P49815 TSC2 P49815.4.S1132.p_TSC2 P49815-4_S1132s _1_1_1132_1132 P49815-4 P49815|P49815-4|P49815-2|P49815-3|H3BMQ0|P49815-5|P49815-6|P49815-7 Isoform 4 of Tuberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4467.4467.3 11.98 11.98 1.109 2 1 1 0 404.1913 1130.5938 S1132s TMT10 1130 (R) SMsGGHGLR (V) S(0.0)MS(0.99)GGHGLR s:Phosphorylated S TSC2 200147.7 5 11 214.1 435.34 HUMAN 1 -4.7046 -17.2388 RDSALQDTDDSDDDP-p Q58WW2-3;T731-p RDSALQDTDDSDDDP 0.192149955549525 0.473690328055589 0.253333333333333 0.131666666666667 13.9809277244233 4.32541123356392 0.253333333333333 0.131666666666667 0.0399859324110841 0.369367667267783 2.68941745020482 0.978667440460225 Q58WW2 DCAF6 Q58WW2.3.T731.p_DCAF6 Q58WW2-3_T731tS734s_2_2_731_734 Q58WW2-3 Q58WW2-3|Q58WW2-4|Q58WW2-2 Isoform 3 of DDB1- and CUL4-associated factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24735.24735.2 16.61 16.61 5.503 3 2 2 0 1302.5544 2444.1626 T731t S734s TMT10 725 (R) DSALQDtDDsDDDPVLIPGAR (Y) DS(0.0)ALQDT(0.99)DDS(0.99)DDDPVLIPGAR t:Phosphorylated T,s:Phosphorylated S DCAF6 107567.4 4 5 2596.1 77.25 HUMAN 1 13.9809 4.3254 RDSDKPETPPVVNVP-p A0A286YFF8;T1188-p RDSDKPETPPVVNVP 0.608081478632811 0.279682324306741 -0.0716666666666667 0.130666666666667 4.00108300828344 7.29001712967098 -0.0716666666666667 0.130666666666667 0.398007906200143 0.186637232937642 -0.917336623814291 1.51125473916106 A0A286YFF8 NotFound A0A286YFF8.T1188.p_NotFound A0A286YFF8_T1188t _1_1_1188_1188 A0A286YFF8 Q7Z3U7|Q7Z3U7-5|Q7Z3U7-6|Q7Z3U7-2|Q7Z3U7-3|A0A286YFF8 Protein MON2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36893.36893.5 28.15 30.29 3.602 6 1 1 0 967.9271 4755.6523 T1188t TMT10 1169 (K) SFQEILQIVSPVRDSDKPEtPPVVNVPVPVLIGPISGMSR (P) S(0.0)FQEILQIVS(0.0)PVRDS(0.0)DKPET(0.99)PPVVNVPVPVLIGPIS(0.0)GMS(0.0)R K:TMT10,t:Phosphorylated T MON2 192594.7 11 4 1105.1 176.81 HUMAN 1 -4.0011 7.29 RDSEGFNSPKQCDSS-p O43303;S170-p RDSEGFNSPKQCDSS 0.506609842161293 0.546099151368599 -0.119 0.063 5.44551420023206 3.53340507493629 -0.119 0.063 0.28539645872889 0.44326097000679 -1.18511068223395 0.826689797525821 O43303 CCP110 O43303.S170.p_CCP110 O43303_S170s_1_1_170_170 O43303 O43303|O43303-2 Centriolar coiled-coil protein of 110 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26965.26965.4 14.42 10.42 1.736 3 1 1 0 1040.028 4076.1213 N150n S170s TMT10 142 (K) IAGILPLDnEDQCKTDGIDLARDSEGFNsPK (Q) IAGILPLDN(0.99)EDQCKT(0.0)DGIDLARDS(0.0)EGFN(0.0)S(0.99)PK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S CCP110 114220.9 7 3 1000.1 190.08 HUMAN 1 -5.4455 3.5334 RDSENLASPSEYPEN-p P52948;S623-p RDSENLASPSEYPEN 0.254996768567997 0.505938158887248 -0.179666666666667 -0.064 11.2902026307912 3.96469796185941 -0.179666666666667 -0.064 0.0742984471316817 0.401356410367003 -2.20703058857121 -0.910222388062971 P52948 NUP98 P52948.S623.p_NUP98 P52948_S623s _1_1_623_623 P52948 P52948|P52948-5|P52948-2|P52948-6|P52948-3|P52948-4 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19407.19407.4 27.39 27.39 3.641 6 1 1 0 918.9237 3592.7102 S623s TMT10 604 (K) NLNNSNLFSPVNRDSENLAsPSEYPENGER (F) NLNNS(0.0)NLFS(0.0)PVNRDS(0.0)ENLAS(0.99)PS(0.0)EY(0.0)PENGER s:Phosphorylated S NUP98 198716.8 18 6 187.1 472.84 HUMAN 1 -11.2902 -3.9647 RDSGRGDSVSDSGSD-p Q53EL6;S76-p RDSGRGDSVSDSGSD 0.102728705875057 0.0678572374230969 -0.434666666666667 -0.408 20.8661200275839 15.5469038555714 -0.434666666666667 -0.408 0.00819196328575885 0.0278810814048956 -4.06734411575921 -2.97963474313996 Q53EL6 PDCD4 Q53EL6.S76.p_PDCD4 Q53EL6_S76s _1_1_76_76 Q53EL6 Q53EL6|Q53EL6-2 Programmed cell death protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3935.3935.2 19.42 19.42 1.283 5 1 1 0 880.8581 1680.742 S76s Hydrogen 70 (R) DSGRGDsVSDSGSDALR (S) DS(0.0)GRGDS(0.99)VS(0.0)DS(0.0)GS(0.0)DALR s:Phosphorylated S PDCD4 52133.7 11 5 476.1 301.17 HUMAN 1 -20.8661 -15.5469 RDSHGNASPARTPSA-p J3KQC6;S10-p RDSHGNASPARTPSA 0.384369345597367 0.277981764400795 -0.143333333333333 -0.305666666666667 7.68977108850739 7.32572265061267 -0.143333333333333 -0.305666666666667 0.170224822952429 0.185109085362567 -1.58129339423188 -1.51747837533645 J3KQC6 NotFound J3KQC6.S10.p_NotFound J3KQC6_S10s _1_1_10_10 J3KQC6 J3KQC6|E9PRA0|Q9BYE2-2|Q9BYE2-5|Q9BYE2-3|Q9BYE2-4 Transmembrane protease serine 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3055.3055.2 14.06 8.17 6.18 2 1 1 0 660.7994 1240.6232 S10s TMT10 4 (R) DSHGNAsPAR (T) DS(0.0)HGNAS(0.99)PAR s:Phosphorylated S TMPRSS13 64250 2 1 1604.1 128.27 HUMAN 1 -7.6898 -7.3257 RDSNAPKSPLTGYVR-p Q9NP66;S105-p RDSNAPKSPLTGYVR 0.711206464973155 0.0114504617192839 -0.0686666666666667 -0.441666666666667 2.78243535464325 27.1643267108161 -0.0686666666666667 -0.441666666666667 0.526934294289108 0.0019211767797853 -0.675865094769318 -5.60585887907688 Q9NP66 HMG20A Q9NP66.S105.p_HMG20A Q9NP66_S105s _1_1_105_105 Q9NP66 Q9NP66 High mobility group protein 20A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12332.12332.5 15.11 11.35 1.319 4 1 1 0 554.1189 2686.5971 S105s TMT10 95 (K) KPLRDSNAPKsPLTGYVR (F) KPLRDS(0.0)NAPKS(0.99)PLT(0.0)GY(0.0)VR K:TMT10,s:Phosphorylated S HMG20A 40142.8 12 2 3406.1 51.81 HUMAN 1 -2.7824 -27.1643 RDSRLSFSDSESDNS-p Q03111;S440-p RDSRLSFSDSESDNS 0.260407038253762 0.971438350726511 -0.171666666666667 -0.00366666666666665 11.072976356926 0.178031520863517 -0.171666666666667 -0.00366666666666665 0.078109231394086 0.959835587121762 -2.16889912992854 -0.052729623503126 Q03111 MLLT1 Q03111.S440.p_MLLT1 Q03111_S440sS442s_2_2_440_442 Q03111 Q03111 Protein ENL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17951.17951.5 16.25 16.25 1.166 9 2 2 0 868.6222 4179.1449 S440s S442s TMT10 437 (R) LSFsDsESDNSADSSLPSREPPPPQKPPPPNSK (V) LS(0.0)FS(0.99)DS(0.99)ES(0.0)DNS(0.0)ADS(0.0)S(0.0)LPS(0.0)REPPPPQKPPPPNS(0.0)K K:TMT10,s:Phosphorylated S MLLT1 62454.4 2 10 685.1 243.68 HUMAN 1 -11.073 -0.178 RDSSQEYTDSTGIDL-p B5MCU0;T147-p RDSSQEYTDSTGIDL 0.0520154613962689 0.399477556879128 -0.495333333333333 0.111666666666667 27.9946154502388 5.29971559184052 -0.495333333333333 0.111666666666667 0.00158685942255493 0.295140250001047 -5.84443651914336 1.15846367094823 B5MCU0 NotFound B5MCU0.T147.p_NotFound B5MCU0_T147t _1_1_147_147 B5MCU0 B5MCU0 R3H domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30934.30934.4 18.13 18.13 1.198 8 1 1 0 910.2017 3557.8198 T147t TMT10 137 (K) MLSRDSSQEYtDSTGIDLHEFLVNTLK (K) MLS(0.0)RDS(0.0)S(0.0)QEY(0.0)T(0.99)DS(0.0)T(0.0)GIDLHEFLVNT(0.0)LK K:TMT10,t:Phosphorylated T R3HDM2 109377.4 1 3 761.1 230.16 HUMAN 1 -27.9946 5.2997 RDVDASPSPLSVQDL-p Q8IWZ8;S411-p RDVDASPSPLSVQDL 0.744043857023488 0.187325038000205 -0.048 -0.131333333333333 2.4392021639529 9.56708724384706 -0.048 -0.131333333333333 0.570269025947901 0.110481935933202 -0.604010235417198 -1.90585320164972 Q8IWZ8 SUGP1 Q8IWZ8.S411.p_SUGP1 Q8IWZ8_S411s _1_1_411_411 Q8IWZ8 Q8IWZ8 SURP and G-patch domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22077.22077.2 16.7 16.7 1.26 3 1 1 0 1055.0483 2029.1218 S411s TMT10 405 (R) DVDASPsPLSVQDLK (G) DVDAS(0.0)PS(0.99)PLS(0.0)VQDLK K:TMT10,s:Phosphorylated S SUGP1 72583.7 4 4 1701.1 120.31 HUMAN 1 -2.4392 -9.5671 RDVDSEISDLENEVE-p Q96SB8-2;S695-p RDVDSEISDLENEVE 0.373695113080525 0.064075058176856 0.143 0.25 7.92117539525713 15.883706270664 0.143 0.25 0.161392169826214 0.0258005742891558 1.62148360818628 3.04376101361669 Q96SB8 SMC6 Q96SB8.2.S695.p_SMC6 Q96SB8-2_S695s _1_1_695_695 Q96SB8-2 Q96SB8-2 Isoform 2 of Structural maintenance of chromosomes protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28960.28960.3 15.81 13.84 4.22 2 1 1 0 791.7086 2293.1447 S695s TMT10 689 (R) DVDSEIsDLENEVENK (T) DVDS(0.0)EIS(0.99)DLENEVENK K:TMT10,s:Phosphorylated S SMC6 130178.6 4 3 3775.1 43.35 HUMAN 1 7.9212 15.8837 RDVFLNGSYNDYVRE-p J3QR07;S596-p RDVFLNGSYNDYVRE 0.348816513983719 0.469572007665595 -0.457 -0.0946666666666667 8.49946300226277 4.37679875656937 -0.457 -0.0946666666666667 0.141271221328519 0.365022911115138 -1.72171361545385 -0.98832475043843 J3QR07 YTHDC1 J3QR07.S596.p_YTHDC1 J3QR07_S596s _1_1_596_596 J3QR07 J3QR07|Q96MU7|Q96MU7-2 YTH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22731.22731.3 17.28 17.28 3.478 3 1 1 0 624.2905 1790.8911 S596s TMT10 590 (R) DVFLNGsYNDYVR (E) DVFLNGS(0.99)Y(0.0)NDY(0.0)VR s:Phosphorylated S YTHDC1 85871.1 4 17 702.1 239.92 HUMAN 1 -8.4995 -4.3768 RDVVLSTSPKLLATA-p Q9P275-2;S582-p RDVVLSTSPKLLATA 0.528368411677575 0.00307089593604883 -0.0936666666666667 -0.726333333333333 5.12656663636433 37.7619930207541 -0.0936666666666667 -0.726333333333333 0.307144919737672 0.000167417440435473 -1.12720231812862 -9.16889777204591 Q9P275 USP36 Q9P275.2.S582.p_USP36 Q9P275-2_S582s_1_1_582_582 Q9P275-2 Q9P275-2|A0A075B784 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19108.19108.3 10.69 10.28 1.15 5 1 1 0 685.3314 1991.0395 Q569q S582s Hydrogen 569 (R) qGSWDSRDVVLSTsPK (L) Q(1.0)GS(0.0)WDS(0.0)RDVVLS(0.0)T(0.0)S(0.99)PK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S USP36 124218 8 8 241.1 413.35 HUMAN 1 -5.1266 -37.762 RDYASHLSPGSIIQP-p Q9Y618;S54-p RDYASHLSPGSIIQP 0.931970571874728 0.715698318721438 0.0133333333333333 0.037 0.607294749908436 1.99821886029307 0.0133333333333333 0.037 0.869501879311966 0.631216167401185 0.172247577040729 0.508348555958328 Q9Y618 NCOR2 Q9Y618.S54.p_NCOR2 Q9Y618_S54s _1_1_54_54 Q9Y618 Q9Y618|Q9Y618-3 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17873.17873.3 19.88 19.88 4.248 4 1 1 0 693.3475 1998.0606 S54s TMT10 48 (R) DYASHLsPGSIIQPQR (R) DY(0.0)AS(0.0)HLS(0.99)PGS(0.0)IIQPQR s:Phosphorylated S NCOR2 275540.8 4 1 16.1 1053.89 HUMAN 1 0.6073 1.9982 RDYNIANTV______-p O43567;T380-p RDYNIANTV______ 0.240968535804429 0.0122787245480298 -0.199333333333333 -0.548666666666667 11.8126420700106 26.6750670944213 -0.199333333333333 -0.548666666666667 0.0658773002760942 0.00215027145940777 -2.2991459677343 -5.47348166239771 O43567 RNF13 O43567.T380.p_RNF13 O43567_T380t _1_1_380_380 O43567 O43567|O43567-2 E3 ubiquitin-protein ligase RNF13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15756.15756.2 10.01 10.01 10.007 2 1 1 0 609.7843 1138.5942 T380t TMT10 374 (R) DYNIANtV (-) DY(0.0)NIANT(0.99)V t:Phosphorylated T RNF13 43383.4 1 1 4515.1 30.43 HUMAN 1 -11.8126 -26.6751 RDYYSSRSQSGGYSD-p Q14011;S146-p RDYYSSRSQSGGYSD 0.148266672319898 0.25265234336626 0.262666666666667 0.142666666666667 16.8166289566772 7.86901109123332 0.262666666666667 0.142666666666667 0.0208131159807725 0.163342384376997 3.22660501631561 1.61192691034214 Q14011 CIRBP Q14011.S146.p_CIRBP Q14011_S146s _1_1_146_146 Q14011 D6W5Y5|Q14011-2|Q14011-3|K7EQR7|K7EPM4|K7EMY9 Cold-inducible RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5951.5951.3 12.26 7.84 1.108 8 1 1 0 679.6239 1956.8885 S146s TMT10 140 (R) DYYSSRsQSGGYSDR (S) DY(0.0)Y(0.0)S(0.0)S(0.0)RS(0.99)QS(0.0)GGY(0.0)S(0.0)DR s:Phosphorylated S CIRBP 18647.7 1 3 2655.1 74.98 HUMAN 1 16.8166 7.869 REANNGSSPAGSLAD-p P51692;S128-p REANNGSSPAGSLAD 0.95238129272552 0.0459729598138898 -0.00900000000000001 0.250666666666667 0.420298028109182 17.8958138552681 -0.00900000000000002 0.250666666666667 0.907758234486134 0.0162337410637503 -0.121395754712647 3.43841623444987 P51692 STAT5B P51692.S128.p_STAT5B P51692_S128s _1_1_128_128 P51692 P51692 Signal transducer and activator of transcription 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18632.18632.2 15.07 15.07 1.181 4 1 1 0 1187.0615 2293.1494 S128s TMT10 122 (R) EANNGSsPAGSLADAMSQK (H) EANNGS(0.0)S(0.99)PAGS(0.0)LADAMS(0.0)QK K:TMT10,s:Phosphorylated S STAT5B 90377.7 7 1 4456.1 31.13 HUMAN 1 -0.4203 17.8958 REAPGRLSEPDQFVL-p A4D2P6;S961-p REAPGRLSEPDQFVL 0.652911308934577 0.00239661551219452 -0.103666666666667 0.902 3.471208621697 40.1886609839666 -0.103666666666667 0.902 0.449654700630786 9.57489238714361e-05 -0.814597550839448 10.216547648123 A4D2P6 GRID2IP A4D2P6.S961.p_GRID2IP A4D2P6_S961s _1_1_961_961 A4D2P6 A4D2P6|C9JNS8|C9J5F6 Delphilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.36087.36087.4 16.65 16.65 9.367 3 1 1 0 793.6594 3091.6538 S961s TMT10 955 (R) EAPGRLsEPDQFVLQMLSVPEYK (T) EAPGRLS(0.99)EPDQFVLQMLS(0.0)VPEY(0.0)K K:TMT10,s:Phosphorylated S GRID2IP 133358.1 1 1 5163.1 22.27 HUMAN 1 -3.4712 40.1887 REARKDRTPPPRFRP-p P62854;T96-p REARKDRTPPPRFRP 0.048419304614536 0.484374195683068 0.456 -0.066 29.123261971565 4.20335511940722 0.456 -0.066 0.00122369673941171 0.379895796406139 6.16974609420669 -0.955638988378522 P62854 RPS26 P62854.T96.p_RPS26 P62854_T96t _1_1_96_96 P62854 P62854 40S ribosomal protein S26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.3604.3604.3 8.61 6.23 99 1 1 1 0 502.2848 1424.8738 T96t TMT10 93 (R) KDRtPPPR (F) KDRT(1.0)PPPR K:TMT10,t:Phosphorylated T RPS26 13300.5 6 2 3630.1 46.56 HUMAN 1 29.1233 -4.2034 REAVRLHSPQTHWKT-p Q9H8Y5;S361-p REAVRLHSPQTHWKT 0.85107973826145 0.0217204446464741 -0.0273333333333333 -0.311333333333333 1.35499961519281 22.738553485931 -0.0273333333333334 -0.311333333333333 0.731981388057111 0.00532285519239637 -0.360699661282258 -4.48793957049775 Q9H8Y5 ANKZF1 Q9H8Y5.S361.p_ANKZF1 Q9H8Y5_S361s _1_1_361_361 Q9H8Y5 Q9H8Y5|B8ZZS4 Ankyrin repeat and zinc finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9231.9231.3 15.53 15.53 2.839 2 1 1 0 557.9638 1591.9109 S361s TMT10 359 (R) LHsPQTHWK (T) LHS(0.99)PQT(0.0)HWK K:TMT10,s:Phosphorylated S ANKZF1 81610 7 1 1990.1 103.88 HUMAN 1 -1.355 -22.7386 RECLGRQSPLCPKFE-p A0A087WYR5;S132-p RECLGRQSPLCPKFE 0.833043573341717 0.0679750750480324 0.0316666666666667 0.277 1.52990006374418 15.5332146751596 0.0316666666666667 0.277 0.703088498588966 0.0279691026259893 0.401980892092844 2.97703917797029 A0A087WYR5 ZNF2 A0A087WYR5.S132.p_ZNF2 A0A087WYR5_S132s _1_1_132_132 A0A087WYR5 A0A087WYR5|Q9BSG1|Q9BSG1-2|Q9BSG1-4 Zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10568.10568.3 12.85 7.05 99 1 1 1 0 661.6699 1903.0294 S132s TMT10 126 (R) ECLGRQsPLCPK (F) ECLGRQS(1.0)PLCPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF2 51568.9 3 1 4173.1 36.2 HUMAN 1 1.5299 15.5332 RECRLRNSEGEATEL-p P19447;S202-p RECRLRNSEGEATEL 0.647680844341622 0.0510800613288817 0.0636666666666666 0.281333333333333 3.53371301452119 17.2505056550463 0.0636666666666666 0.281333333333333 0.443229541387344 0.0188342978639932 0.826878592036546 3.30956957890165 P19447 ERCC3 P19447.S202.p_ERCC3 P19447_S202s _1_1_202_202 P19447 P19447 TFIIH basal transcription factor complex helicase XPB subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26532.26532.4 14.71 13.53 2.465 6 1 1 0 666.8449 2584.387 S202s TMT10 199 (R) LRNsEGEATELITETFTSK (S) LRNS(0.99)EGEAT(0.0)ELIT(0.0)ET(0.0)FT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ERCC3 90074.9 2 1 5072.1 23.31 HUMAN 1 3.5337 17.2505 REDENDASDDEDDDE-p Q9Y5B6;S262-p REDENDASDDEDDDE 0.221440669353428 0.993182823561635 0.343 -0.000999999999999973 12.604336382331 0.041611793256023 0.343 -0.000999999999999973 0.0548992437227308 0.99046428654107 2.44000886717888 -0.0125124276881042 Q9Y5B6 PAXBP1 Q9Y5B6.S262.p_PAXBP1 Q9Y5B6_S262s _1_1_262_262 Q9Y5B6 Q9Y5B6|Q9Y5B6-2|Q9Y5B6-4|Q9Y5B6-3 PAX3- and PAX7-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6305.6305.5 21.51 21.51 99 1 1 1 0 592.671 2879.3655 S262s TMT10 253 (R) LVREDENDAsDDEDDDEKRR (I) LVREDENDAS(1.0)DDEDDDEKRR K:TMT10,s:Phosphorylated S PAXBP1 105258.2 6 5 978.1 192.69 HUMAN 1 12.6043 -0.0416 REDKSDQSDDEKIQN-p Q8WVC0;S154-p REDKSDQSDDEKIQN 0.0511487796737011 0.00378801928208732 -1.08533333333333 1.39533333333333 28.30936842986 35.9040243208883 -1.08533333333333 1.39533333333333 0.00147592115261659 0.000256801506950778 -5.93378731416775 8.43304499010722 Q8WVC0 LEO1 Q8WVC0.S154.p_LEO1 Q8WVC0_S154s _1_1_154_154 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7914.7914.4 9.91 5.64 6.934 2 1 1 0 616.3006 2382.214 S154s TMT10 145 (K) WGREDKSDQsDDEK (I) WGREDKS(0.0)DQS(0.99)DDEK K:TMT10,s:Phosphorylated S LEO1 75516.9 3 3 514.1 286.88 HUMAN 1 -28.3094 35.904 REDRRGRSPQPPAEE-p Q9BUJ2;S194-p REDRRGRSPQPPAEE 0.310570497074782 0.0158781727748385 0.143666666666667 0.365333333333333 9.49360131830383 24.8638408850599 0.143666666666667 0.365333333333333 0.112367279962767 0.00326299126730835 1.89384932161043 5.00317400807646 Q9BUJ2 HNRNPUL1 Q9BUJ2.S194.p_HNRNPUL1 Q9BUJ2_S194s _1_1_194_194 Q9BUJ2 Q9BUJ2|Q9BUJ2-2|B7Z4B8|A0A0A0MRA5|Q9BUJ2-4|Q9BUJ2-3 Heterogeneous nuclear ribonucleoprotein U-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.39619.40182.4 37.37 37.37 14.932 4 1 1 0 1062.7361 4167.9494 S194s TMT10 192 (R) GRsPQPPAEEDEDDFDDTLVAIDTYNCDLHFK (V) GRS(0.99)PQPPAEEDEDDFDDT(0.0)LVAIDT(0.0)Y(0.0)NCDLHFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HNRNPUL1 96307.3 132 1 999.1 190.09 HUMAN 1 9.4936 24.8638 REDSGLFSPIRSSAF-p Q9UKA4;S448-p REDSGLFSPIRSSAF 0.0444873405743474 0.00995309608398391 -0.499 -0.880666666666667 30.0177119498869 28.138350876923 -0.499 -0.880666666666667 0.000995929977904416 0.00153519982530483 -6.43751427391341 -5.87654800856999 Q9UKA4 AKAP11 Q9UKA4.S448.p_AKAP11 Q9UKA4_S448s _1_1_448_448 Q9UKA4 Q9UKA4 A-kinase anchor protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14602.14602.3 12.95 10.36 4.709 3 1 1 0 581.959 1663.8965 S448s TMT10 439 (K) ASREDSGLFsPIR (S) AS(0.0)REDS(0.0)GLFS(0.99)PIR s:Phosphorylated S AKAP11 213075.9 2 6 688.1 243.29 HUMAN 1 -30.0177 -28.1384 REDYKRLSLGAQKGR-p Q9H788;S261-p REDYKRLSLGAQKGR 0.0502983677372574 0.00550441818666763 -0.453666666666667 -0.822333333333333 28.6766101772169 32.7667534585347 -0.453666666666667 -0.822333333333333 0.00135624759877425 0.000528840435435964 -6.03936815627024 -7.30711502300673 Q9H788 SH2D4A Q9H788.S261.p_SH2D4A Q9H788_S261s _1_1_261_261 Q9H788 Q9H788 SH2 domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11378.11378.3 8.13 8.13 99 1 1 1 0 470.9464 1330.8571 S261s TMT10 259 (K) RLsLGAQK (G) RLS(1.0)LGAQK K:TMT10,s:Phosphorylated S SH2D4A 52954.2 1 2 3619.1 46.82 HUMAN 1 -28.6766 -32.7668 REEFLSASPEPRAKD-p Q9Y2G4;S328-p REEFLSASPEPRAKD 0.711219354636381 0.12063603803284 -0.051 0.213333333333333 2.78195589908341 12.1122891405068 -0.051 0.213333333333333 0.526992470373254 0.0614852702063422 -0.675766110175334 2.35108146640173 Q9Y2G4 ANKRD6 Q9Y2G4.S328.p_ANKRD6 Q9Y2G4_S328s _1_1_328_328 Q9Y2G4 Q9Y2G4|Q9Y2G4-3|Q9Y2G4-1|Q9Y2G4-4 Ankyrin repeat domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11423.11423.4 16.46 11.17 2.381 2 1 1 0 604.0602 2333.2501 S328s TMT10 317 (R) KEEAREEFLSAsPEPR (A) KEEAREEFLS(0.0)AS(0.99)PEPR K:TMT10,s:Phosphorylated S ANKRD6 80825.7 2 1 5767.1 16.46 HUMAN 1 -2.782 12.1123 REEIKIKSQDFYEKE-p Q8N183;S102-p REEIKIKSQDFYEKE 0.066704952367969 0.0103145516865812 -0.381 -0.423333333333333 25.3585634874262 27.8910473131734 -0.381 -0.423333333333333 0.00291168005301263 0.00162515679742796 -5.1351668882801 -5.80689975764805 Q8N183 NDUFAF2 Q8N183.S102.p_NDUFAF2 Q8N183_S102s _1_1_102_102 Q8N183 Q8N183 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15429.15429.3 11.08 11.08 6.287 2 1 1 0 642.352 1845.0725 S102s TMT10 100 (K) IKsQDFYEK (E) IKS(0.99)QDFY(0.0)EK K:TMT10,s:Phosphorylated S NDUFAF2 19856 1 1 3443.1 50.92 HUMAN 1 -25.3586 -27.891 REERDAVYSEYKLIM-p Q8TDM6;Y429-p REERDAVYSEYKLIM 0.970961786282762 0.165379493656444 -0.007 0.157666666666667 0.251707166786471 10.277581836678 -0.007 0.157666666666667 0.9436898486271 0.0938084189328451 -0.0739724810664204 2.02913349683893 Q8TDM6 DLG5 Q8TDM6.Y429.p_DLG5 Q8TDM6_Y429y _1_1_429_429 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2 Disks large homolog 5 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.10548.10592.4 18.84 18.84 4.429 4 1 1 0 562.2801 2166.1232 Y429y TMT10 421 (K) YREERDAVySEYK (L) Y(0.0)REERDAVY(0.99)S(0.0)EY(0.0)K K:TMT10,y:Phosphorylated Y DLG5 215575.4 6 1 71.1 34.26 HUMAN 1 -0.2517 10.2776 REERLRHSRNPATRG-p P48730-2;S318-p REERLRHSRNPATRG 0.566468680637233 0.180368650235634 -0.169 -0.217666666666667 4.54719314321174 9.78508652930458 -0.169 -0.217666666666667 0.350978639093225 0.105073051978792 -1.02038404631867 -1.94362865857861 P48730 CSNK1D P48730.2.S318.p_CSNK1D P48730-2_S318s _1_1_318_318 P48730-2 H7BYT1|P48730|P48730-2 Isoform 2 of Casein kinase I isoform delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.3184.3184.4 7.04 7.04 7.04 2 1 1 0 379.9568 1436.8396 S318s TMT10 315 (R) LRHsRNPATR (G) LRHS(0.99)RNPAT(0.0)R s:Phosphorylated S CSNK1D 47116.9 1 8 1498.1 136.39 HUMAN 1 -4.5472 -9.7851 REGAPGKSPEEMYIQ-p Q9NSA3;S10-p REGAPGKSPEEMYIQ 0.56180416027387 0.0969607108268271 -0.091 -0.285333333333333 4.60879232319469 13.4029347988152 -0.091 -0.285333333333333 0.346035589284829 0.0456779410944976 -1.03185320520945 -2.58246373571299 Q9NSA3 CTNNBIP1 Q9NSA3.S10.p_CTNNBIP1 Q9NSA3_S10s _1_1_10_10 Q9NSA3 Q9NSA3 Beta-catenin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15081.15081.3 10.24 10.24 2.842 2 1 1 0 853.776 2479.347 S10s TMT10 4 (R) EGAPGKsPEEMYIQQK (V) EGAPGKS(0.99)PEEMY(0.0)IQQK K:TMT10,s:Phosphorylated S CTNNBIP1 9170.2 1 1 6670.1 10.24 HUMAN 1 -4.6088 -13.4029 REGFGRQSMSEKRTK-p Q8TEW0;S827-p REGFGRQSMSEKRTK 0.986950836177615 0.769828622510024 0.00333333333333331 -0.035 0.116361654179899 1.56984497181899 0.00333333333333331 -0.035 0.97356249402645 0.696651381723276 0.0347007052298311 -0.411239399137311 Q8TEW0 PARD3 Q8TEW0.S827.p_PARD3 Q8TEW0_S827s _1_1_827_827 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6478.6478.4 12.71 12.71 2.14 2 1 1 0 488.2469 1870.0005 S827s TMT10 821 (R) EGFGRQsMSEKR (T) EGFGRQS(0.99)MS(0.0)EKR K:TMT10,s:Phosphorylated S PARD3 151933.9 3 14 65.1 692.2 HUMAN 1 0.1164 -1.5698 REGGKPPTPPPKILS-p Q8TD55;T311-p REGGKPPTPPPKILS 0.743332697084522 0.480670546191178 -0.0603333333333333 -0.0726666666666667 2.44764966009651 4.2466104047187 -0.0603333333333333 -0.0726666666666667 0.569160869269414 0.37613085355332 -0.605803771181127 -0.963814812947086 Q8TD55 PLEKHO2 Q8TD55.T311.p_PLEKHO2 Q8TD55_T311t _1_1_311_311 Q8TD55 Q8TD55|Q8TD55-2 Pleckstrin homology domain-containing family O member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8344.8760.3 13.52 9.02 99 1 1 1 0 624.6913 1792.0936 T311t TMT10 305 (R) EGGKPPtPPPK (I) EGGKPPT(1.0)PPPK K:TMT10,t:Phosphorylated T PLEKHO2 53691.3 4 1 2743.1 72.05 HUMAN 1 -2.4476 -4.2466 REGIDSQSLIELKTQ-p Q8N960;S347-p REGIDSQSLIELKTQ 0.128141212831292 0.00768778782016617 -0.317 0.718333333333333 18.4772991869827 30.1824756599616 -0.317 0.718333333333333 0.0141994028699122 0.000958853888927463 -3.55951378713295 6.47748533895351 Q8N960 CEP120 Q8N960.S347.p_CEP120 Q8N960_S347s _1_1_347_347 Q8N960 Q8N960|Q8N960-2 Centrosomal protein of 120 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23610.23610.3 9.04 5.86 2.446 2 1 1 0 624.0047 1790.0312 S347s TMT10 341 (R) EGIDSQsLIELK (T) EGIDS(0.0)QS(0.99)LIELK K:TMT10,s:Phosphorylated S CEP120 113265.7 1 1 3461.1 50.36 HUMAN 1 -18.4773 30.1825 REGLKNQSPTEAEKP-p Q99567;S35-p REGLKNQSPTEAEKP 0.217808202220663 0.0207607593661443 0.197 0.317666666666667 12.7533716082182 23.0209090526401 0.197 0.317091811095564 0.05304724565569 0.00498780073331187 2.46671933208109 4.55426530933327 Q99567 NUP88 Q99567.S35.p_NUP88 Q99567_S35s _1_1_35_35 Q99567 Q99567|I3L2W3 Nuclear pore complex protein Nup88 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18164.18164.3 15.66 13.91 1.806 8 1 1 0 1086.5658 3177.7156 S35s TMT10 33 (K) NQsPTEAEKPASSSLPSSPPPQLLTR (N) NQS(0.99)PT(0.0)EAEKPAS(0.0)S(0.0)S(0.0)LPS(0.0)S(0.0)PPPQLLT(0.0)R K:TMT10,s:Phosphorylated S NUP88 84681.5 8 1 1211.1 166.39 HUMAN 1 12.7534 23.0209 REGPSCPSPGPFCRE-p Q4AC94;S2114-p REGPSCPSPGPFCRE 0.982673656696447 0.145549168976197 -0.00566666666666668 -0.192333333333333 0.151229434533594 11.0258161547732 -0.00566666666666668 -0.192333333333333 0.965777440512918 0.0789620444784926 -0.0449262430569228 -2.15965644338765 Q4AC94 C2CD3 Q4AC94.S2114.p_C2CD3 Q4AC94_S2114s _1_1_2114_2114 Q4AC94 Q4AC94 C2 domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20121.20121.4 19.28 19.28 3.674 2 1 1 0 679.5726 2635.3083 S2114s TMT10 2108 (R) EGPSCPsPGPFCREELMVK (S) EGPS(0.0)CPS(0.99)PGPFCREELMVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C2CD3 262780.3 2 12 722.1 237.14 HUMAN 1 -0.1512 -11.0258 REGSFRLSGGGRPAE-p Q9Y6R0;S228-p REGSFRLSGGGRPAE 0.885538071886065 0.0186492288603813 -0.0413333333333334 -0.425333333333333 1.04212959413155 23.7993881484027 -0.0413333333333334 -0.425333333333334 0.786659950756067 0.00416928117849133 -0.28441306085235 -4.74043578110312 Q9Y6R0 NUMBL Q9Y6R0.S228.p_NUMBL Q9Y6R0_S228s _1_1_228_228 Q9Y6R0 Q9Y6R0|A0A0C4DGH3 Numb-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7758.7758.4 9.3 9.3 9.304 2 1 1 0 471.988 1804.9616 S228s TMT10 222 (R) EGSFRLsGGGRPAER (E) EGS(0.0)FRLS(0.99)GGGRPAER s:Phosphorylated S NUMBL 65632 1 17 538.2 277.23 HUMAN 1 -1.0421 -23.7994 REGSLEGS_______-p Q9BW27;S656-p REGSLEGS_______ 0.326712709573282 0.787520307114838 0.202666666666667 0.0373333333333334 9.09312679433303 1.44068045821302 0.202666666666667 0.0373333333333334 0.123221735302489 0.71768183514326 1.82448491800725 0.380996619659001 Q9BW27 NUP85 Q9BW27.S656.p_NUP85 Q9BW27_S656s _1_1_656_656 Q9BW27 Q9BW27|J3KT10|Q9BW27-3|J3QL54|F5H0W7 Nuclear pore complex protein Nup85 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13399.13399.2 12.26 12.26 4.788 2 1 1 0 720.869 1360.7634 S656s TMT10 646 (R) AIIREGSLEGs (-) AIIREGS(0.0)LEGS(0.99) s:Phosphorylated S NUP85 75873.9 1 5 3109.1 60.43 HUMAN 1 9.0931 1.4407 REGTRVASIETGLAA-p Q9UPP1;S904-p REGTRVASIETGLAA 0.339080085155691 0.441758446756907 -0.133333333333333 -0.082 8.73893868868757 4.72441891674238 -0.133333333333333 -0.082 0.13369221882736 0.336944295658283 -1.76317285583565 -1.05310252987311 Q9UPP1 PHF8 Q9UPP1.S904.p_PHF8 Q9UPP1_S904s _1_1_904_904 Q9UPP1 O75151|Q9UPP1|Q9UPP1-2|Q9UPP1-3 Histone lysine demethylase PHF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25409.25409.3 16.2 16.2 1.175 2 1 1 0 604.3411 1731.0417 S904s TMT10 902 (R) VAsIETGLAAAAAK (L) VAS(0.99)IET(0.0)GLAAAAAK K:TMT10,s:Phosphorylated S PHF8 118946 2 27 376.1 336.84 HUMAN 1 -8.7389 -4.7244 REHALLAYTLGVKQL-p Q5VTE0;Y141-p REHALLAYTLGVKQL 0.409152196973989 0.0249128990779079 -0.186 0.315666666666667 7.15368394460194 21.8174293040593 -0.186 0.315666666666667 0.192589056496754 0.0065804723645379 -1.48788887139445 4.27583120497984 Q5VTE0 NotFound Q5VTE0.Y141.p_NotFound Q5VTE0_Y141y _1_1_141_141 Q5VTE0 Q05639|P68104|Q5VTE0|A0A087WV01 Putative elongation factor 1-alpha-like 3 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.26571.26620.2 26.01 26.01 3.643 2 1 1 0 927.0195 1773.0675 Y141y TMT10 135 (R) EHALLAyTLGVK (Q) EHALLAY(0.99)T(0.0)LGVK K:TMT10,y:Phosphorylated Y EEF1A1P5 50526.4 5 2 26.1 67.85 HUMAN 1 -7.1537 21.8174 REHGHSYSNRKYESD-p O00418;S464-p REHGHSYSNRKYESD 0.152381872383781 0.722291152264131 0.65 0.0933333333333333 16.4375490605787 1.9450099971453 0.65 0.0933333333333334 0.0227114621086885 0.638997266421028 3.15266161758153 0.496532304848232 O00418 EEF2K O00418.S464.p_EEF2K O00418_S464s _1_1_464_464 O00418 O00418 Eukaryotic elongation factor 2 kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.2452.2452.3 12.67 12.67 1.11 3 1 1 0 465.8718 1315.6341 S464s TMT10 458 (R) EHGHSYsNR (K) EHGHS(0.0)Y(0.0)S(0.99)NR s:Phosphorylated S EEF2K 82713.2 1 6 995.1 190.99 HUMAN 1 16.4375 1.945 REHGPFRSVEDLVRM-p Q7L9B9;S173-p REHGPFRSVEDLVRM 0.235118035263392 0.375188526676318 0.175333333333333 -0.0886666666666666 12.0491502094366 5.65213678396923 0.175333333333333 -0.0886666666666666 0.0623856894559834 0.272136203397626 2.34105548489668 -1.22206218032757 Q7L9B9 EEPD1 Q7L9B9.S173.p_EEPD1 Q7L9B9_S173s _1_1_173_173 Q7L9B9 Q7L9B9 Endonuclease/exonuclease/phosphatase family domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15055.15261.3 17.31 11.03 99 1 1 1 0 617.3106 1769.9496 S173s TMT10 167 (R) EHGPFRsVEDLVR (M) EHGPFRS(1.0)VEDLVR s:Phosphorylated S EEPD1 62857.9 7 5 2305.1 88.81 HUMAN 1 12.0492 -5.6521 REHVHNASAHLTFNK-p Q9NRB3;S211-p REHVHNASAHLTFNK 0.990440674560662 0.154988827873835 -0.00300000000000001 -0.162 0.0855638831058777 10.647914111952 -0.003 -0.162 0.98049100020036 0.0861407381187344 -0.0256038803334383 -2.09362594529128 Q9NRB3 CHST12 Q9NRB3.S211.p_CHST12 Q9NRB3_S211s_1_1_211_211 Q9NRB3 Q9NRB3 Carbohydrate sulfotransferase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21695.21695.5 7.55 7.55 7.281 3 1 1 0 791.1989 3871.0843 N209n S211s Hydrogen 193 (R) GAPYRDPLRIPREHVHnAsAHLTFNKFWRR (Y) GAPY(0.0)RDPLRIPREHVHN(0.99)AS(0.99)AHLT(0.0)FN(0.0)KFWRR K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S CHST12 48698.8 1 1 6244.1 12.89 HUMAN 1 -0.0856 -10.6479 REIMREGSAFEDDDM-p O60216;S175-p REIMREGSAFEDDDM 0.399843082349158 0.383378569396106 0.146 0.132666666666667 7.34713477829981 5.53350723934336 0.146 0.132666666666667 0.184198683617158 0.279672185398657 1.52165087597062 1.20072496123104 O60216 RAD21 O60216.S175.p_RAD21 O60216_S175s _1_1_175_175 O60216 O60216 Double-strand-break repair protein rad21 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32773.32773.4 23.21 23.21 9.043 10 1 1 0 1168.8063 4592.2272 S175s TMT10 169 (R) EIMREGsAFEDDDMLVSTTTSNLLLESEQSTSNLNEK (I) EIMREGS(0.99)AFEDDDMLVS(0.0)T(0.0)T(0.0)T(0.0)S(0.0)NLLLES(0.0)EQS(0.0)T(0.0)S(0.0)NLNEK K:TMT10,s:Phosphorylated S RAD21 71973.5 11 2 1167.1 170.49 HUMAN 1 7.3471 5.5335 REIRRAITGRIPDSL-p Q13363;T340-p REIRRAITGRIPDSL 0.993618410078581 0.757335400309042 0.00133333333333333 -0.0376666666666667 0.0572209383112024 1.66860906727553 0.00133333333333333 -0.0376666666666667 0.986910810411725 0.680987426403314 0.0171772102080655 -0.434047335015411 Q13363 CTBP1 Q13363.T340.p_CTBP1 Q13363_T340t _1_1_340_340 Q13363 Q13363|Q13363-2 C-terminal-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13643.13643.3 7.54 4.76 7.54 2 1 1 0 493.9427 1399.847 T340t Hydrogen 338 (R) AItGRIPDSLK (N) AIT(0.99)GRIPDS(0.0)LK K:TMT10-Lys-Only,t:Phosphorylated T CTBP1 47990.9 1 2 5604.1 17.76 HUMAN 1 0.0572 -1.6686 REKEAVITPVASATQ-p P28749;T385-p REKEAVITPVASATQ 0.205784743513822 0.00566257669290382 -0.226333333333333 -0.778333333333333 13.2756714244271 32.5628428294578 -0.226333333333333 -0.778333333333333 0.0470362681475293 0.000554262781710008 -2.56086213965926 -7.2386097434031 P28749 RBL1 P28749.T385.p_RBL1 P28749_T385t _1_1_385_385 P28749 P28749|P28749-2 Retinoblastoma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16852.16852.3 14.83 14.83 5.47 5 1 1 0 642.3363 1845.0279 T385t TMT10 381 (K) EAVItPVASATQSVSR (L) EAVIT(0.99)PVAS(0.0)AT(0.0)QS(0.0)VS(0.0)R t:Phosphorylated T RBL1 122214.1 4 4 566.1 270.71 HUMAN 1 -13.2757 -32.5628 REKEEPPSPIEATPP-p O75151;S474-p REKEEPPSPIEATPP 0.225331748759477 0.185045710136098 -0.236333333333333 0.193666666666667 12.4327892862776 9.63406730835231 -0.236333333333333 0.193666666666667 0.0571111718414603 0.108791075246272 -2.40934307018722 1.91745585721754 O75151 PHF2 O75151.S474.p_PHF2 O75151_S474s _1_1_474_474 O75151 O75151 Lysine-specific demethylase PHF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19758.19758.5 24.66 15.78 3.445 6 1 1 0 1029.5221 5063.6086 S474s TMT10 448 (K) AVRPEVNTVASSDEVCDGDREKEEPPsPIEATPPQSLLEK (V) AVRPEVNT(0.0)VAS(0.0)S(0.0)DEVCDGDREKEEPPS(0.99)PIEAT(0.0)PPQS(0.0)LLEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PHF2 121742.7 2 2 376.2 336.84 HUMAN 1 -12.4328 9.6341 REKEKKRSPQDVEVL-p Q99996-6;S2669-p REKEKKRSPQDVEVL 0.488011358044077 0.148924472169831 -0.111 0.176 5.74062184040913 10.8867877548202 -0.111 0.176 0.2666476840245 0.0815307100334647 -1.23821640554278 2.13533579514996 Q99996 AKAP9 Q99996.6.S2669.p_AKAP9 Q99996-6_S2669s _1_1_2669_2669 Q99996-6 Q99996-6|A0A0A0MRF6|Q99996-2 Isoform 6 of A-kinase anchor protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11075.11075.3 9.05 9.05 99 1 1 1 0 689.4044 1986.2315 S2669s TMT10 2667 (K) KRsPQDVEVLK (T) KRS(1.0)PQDVEVLK K:TMT10,s:Phosphorylated S AKAP9 457697.2 1 6 1721.1 119.49 HUMAN 1 -5.7406 10.8868 REKFSLFSAAVRESH-p Q96ER9;S183-p REKFSLFSAAVRESH 0.215102413706098 0.0272025018745636 0.226333333333333 0.339666666666667 12.8599143930267 21.2354436574446 0.226333333333333 0.339666666666667 0.0517617034979345 0.00752411862935021 2.48585462518929 4.14506201482577 Q96ER9 CCDC51 Q96ER9.S183.p_CCDC51 Q96ER9_S183s _1_1_183_183 Q96ER9 Q96ER9|Q96ER9-2 Coiled-coil domain-containing protein 51 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28528.28528.2 10.13 10.13 4.042 2 1 1 0 653.8399 1226.7095 S183s TMT10 179 (K) FSLFsAAVR (E) FS(0.0)LFS(0.99)AAVR s:Phosphorylated S CCDC51 46038.7 1 2 5990.1 14.83 HUMAN 1 12.8599 21.2354 REKGTQTSGLLQQPL-p Q9UBY0;S760-p REKGTQTSGLLQQPL 0.201145638307609 0.0342497567891268 -0.203333333333333 0.271 13.5374153413293 19.7427184108517 -0.203333333333333 0.271 0.0442851852648785 0.0106103121036356 -2.6083722414676 3.82043485900241 Q9UBY0 SLC9A2 Q9UBY0.S760.p_SLC9A2 Q9UBY0_S760s _1_1_760_760 Q9UBY0 Q9UBY0 Sodium/hydrogen exchanger 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24189.24189.2 9.97 9.97 1.131 4 1 1 0 1055.0862 2029.2058 S760s TMT10 756 (K) GTQTsGLLQQPLLSK (D) GT(0.0)QT(0.0)S(0.99)GLLQQPLLS(0.0)K K:TMT10,s:Phosphorylated S SLC9A2 92088.6 2 10 1290.1 157.7 HUMAN 1 -13.5374 19.7427 REKLEQKSPDSKTLQ-p P17041;S59-p REKLEQKSPDSKTLQ 0.83264609900975 0.00791547599159641 -0.043 -0.627 1.5356142530858 29.9767413215518 -0.043 -0.627 0.702164024739164 0.00100536987499905 -0.403314436720185 -6.41489254785248 P17041 ZNF32 P17041.S59.p_ZNF32 P17041_S59s _1_1_59_59 P17041 P17041 Zinc finger protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8299.8299.4 9.53 9.53 2.267 2 1 1 0 572.0781 2205.3261 S59s TMT10 53 (R) EKLEQKsPDSK (T) EKLEQKS(0.99)PDS(0.0)K K:TMT10,s:Phosphorylated S ZNF32 31998.5 5 1 5452.1 19.17 HUMAN 1 -1.5356 -29.9767 REKLLRQSPPLPGRE-p Q9C0B5;S554-p REKLLRQSPPLPGRE 0.262340930270938 0.322896540703983 0.193 0.105333333333333 11.0224528446038 6.49033857945688 0.193 0.105333333333333 0.0790232188012366 0.224370699576945 2.1600433609269 1.37111873187453 Q9C0B5 ZDHHC5 Q9C0B5.S554.p_ZDHHC5 Q9C0B5_S554s _1_1_554_554 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15122.15122.5 26.94 23.91 9.306 5 1 1 0 741.1776 3621.8935 S554s TMT10 550 (K) LLRQsPPLPGREEEPGLGDSGIQSTPGSGHAPR (T) LLRQS(0.99)PPLPGREEEPGLGDS(0.0)GIQS(0.0)T(0.0)PGS(0.0)GHAPR s:Phosphorylated S ZDHHC5 78285 5 16 134.1 530.74 HUMAN 1 11.0225 6.4903 REKNHGSSPEQVVRP-p O43164;S309-p REKNHGSSPEQVVRP 0.625010568942101 0.11219674479053 0.068 -0.208 3.79252290982694 12.5346022674188 0.068 -0.208 0.417587710510634 0.0557878691063818 0.877256454160545 -2.42625849856178 O43164 PJA2 O43164.S309.p_PJA2 O43164_S308sS309s_2_2_308_309 O43164 O43164|O43164-2 E3 ubiquitin-protein ligase Praja-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7273.7273.3 7.43 7.43 99 2 2 2 0 685.0059 1893.0707 S308s S309s TMT10 305 (K) NHGssPEQVVRPK (V) NHGS(1.0)S(1.0)PEQVVRPK K:TMT10,s:Phosphorylated S PJA2 79239.7 1 5 2853.1 68.06 HUMAN 1 3.7925 -12.5346 REKPLPPTPGQRLHP-p Q8TF74;T212-p REKPLPPTPGQRLHP 0.972940601914744 0.0417675842092363 -0.00533333333333333 -0.263333333333333 0.232836229864166 18.4825940740606 -0.00533333333333333 -0.263333333333333 0.947799285595292 0.0141821016090207 -0.0685636471804199 -3.55758859986265 Q8TF74 WIPF2 Q8TF74.T212.p_WIPF2 Q8TF74_T212t _1_1_212_212 Q8TF74 Q8TF74|Q8TF74-2 WAS/WASL-interacting protein family member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9421.9421.3 8.48 8.48 99 1 1 1 0 586.6631 1678.0052 T212t TMT10 206 (R) EKPLPPtPGQR (L) EKPLPPT(1.0)PGQR K:TMT10,t:Phosphorylated T WIPF2 46344.7 1 4 952.1 196.18 HUMAN 1 -0.2328 -18.4826 REKPRHKSDVEIPAT-p Q9UEY8;S402-p REKPRHKSDVEIPAT 0.912604724527024 0.0535421916330441 -0.0176666666666667 0.266333333333333 0.774927054014633 16.9491135562504 -0.0176666666666667 0.266333333333333 0.836579647192507 0.0201877837694194 -0.216427586563736 3.25015166815092 Q9UEY8 ADD3 Q9UEY8.S402.p_ADD3 Q9UEY8_S402s _1_1_402_402 Q9UEY8 Q9UEY8|Q9UEY8-2 Gamma-adducin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.30850.30850.5 23.47 23.47 7.672 6 1 1 0 742.9973 3630.9874 S402s TMT10 400 (R) HKsDVEIPATVTAFSFEDDTVPLSPLK (Y) HKS(0.99)DVEIPAT(0.0)VT(0.0)AFS(0.0)FEDDT(0.0)VPLS(0.0)PLK K:TMT10,s:Phosphorylated S ADD3 79495.5 2 21 264.2 396.09 HUMAN 1 -0.7749 16.9491 REKRKPKSQETPATK-p P09012;S115-p REKRKPKSQETPATK 0.444406624505481 0.0115921938200649 0.257 0.510333333333333 6.49148590370641 27.0772324121476 0.257 0.510333333333334 0.224311432891623 0.00196009336597127 1.37167269350505 5.58212155001098 P09012 SNRPA P09012.S115.p_SNRPA P09012_S115s _1_1_115_115 P09012 P09012 U1 small nuclear ribonucleoprotein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6270.6270.3 8.43 8.43 8.43 3 1 1 0 586.332 1677.015 S115s TMT10 115 (K) sQETPATKK (A) S(0.99)QET(0.0)PAT(0.0)KK K:TMT10,s:Phosphorylated S SNRPA 31279 1 1 3475.1 50.13 HUMAN 1 6.4915 27.0772 REKRSVVSFDKVKEP-p Q15424;S604-p REKRSVVSFDKVKEP 0.095910076009562 0.069014797537959 0.360666666666667 -0.352 21.5937595930999 15.4379584273309 0.360666666666667 -0.352 0.00692825782093041 0.0285893418241643 4.22964557839757 -2.95900093889379 Q15424 SAFB Q15424.S604.p_SAFB Q15424_S604s _1_1_604_604 Q15424 Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18007.18007.3 11.78 11.78 3.856 2 1 1 0 592.6807 1696.0612 S604s TMT10 601 (R) SVVsFDKVK (E) S(0.0)VVS(0.99)FDKVK K:TMT10,s:Phosphorylated S SAFB 103096.3 12 37 83.1 629.62 HUMAN 1 21.5938 -15.438 REKSKKYSDVEVPAS-p P35611-3;S408-p REKSKKYSDVEVPAS 0.38526971329313 0.240607344120371 0.130333333333333 0.119 7.66779229023985 8.15189789110065 0.130333333333333 0.119 0.171088481202741 0.153041851410203 1.57747272797796 1.6609639814418 P35611 ADD1 P35611.3.S408.p_ADD1 P35611-3_S408s _1_1_408_408 P35611-3 P35611-3|E7ENY0 Isoform 3 of Alpha-adducin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23052.23052.4 18.91 17.28 1.26 10 1 1 0 898.4232 3510.7099 S408s TMT10 406 (K) KYsDVEVPASVTGYSFASDGDSGTCSPLR (H) KY(0.0)S(0.99)DVEVPAS(0.0)VT(0.0)GY(0.0)S(0.0)FAS(0.0)DGDS(0.0)GT(0.0)CS(0.0)PLR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ADD1 84872.1 2 6 264.1 396.09 HUMAN 1 7.6678 8.1519 REKVRGASGGALPKR-p Q92995;S104-p REKVRGASGGALPKR 0.881910569851389 0.0202348179849632 0.0253333333333333 -0.394 1.07343672059323 23.1967680748884 0.0253333333333333 -0.394 0.781009520472561 0.00478986410997005 0.292199153089978 -4.59589350208338 Q92995 USP13 Q92995.S104.p_USP13 Q92995_S104s _1_1_104_104 Q92995 Q92995|Q92995-2 Ubiquitin carboxyl-terminal hydrolase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7881.7881.2 9.43 3.99 99 1 1 1 0 533.7784 986.5832 S104s Hydrogen 102 (R) GAsGGALPK (R) GAS(1.0)GGALPK K:TMT10-Lys-Only,s:Phosphorylated S USP13 98067.1 2 2 1969.1 104.91 HUMAN 1 1.0734 -23.1968 RELARKGSLKNGSMG-p Q8IW50-6;S47-p RELARKGSLKNGSMG 0.756709311612952 0.0226469914874281 -0.0633333333333333 -0.444 2.3183850683681 22.4627299716346 -0.0633333333333334 -0.444 0.586356161545128 0.00567187959429616 -0.578210690925567 -4.4237482479022 Q8IW50 FAM219A Q8IW50.6.S47.p_FAM219A Q8IW50-6_S47s_1_1_47_47 Q8IW50-6 Q8IW50|A0A0A0MRW3|Q8IW50-4|A0A0A0MRW0|Q8IW50-6|Q8IW50-5|A0A0A0MRV9 Isoform 6 of Protein FAM219A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11296.11296.5 13.86 13.86 1.111 3 1 1 0 643.1708 3130.8743 S47s N50n TMT10 45 (R) KGsLKnGSMGSPVNQQPKK (N) KGS(0.99)LKN(0.99)GS(0.0)MGS(0.0)PVN(0.0)QQPKK K:TMT10,s:Phosphorylated S,n:Deamidated FAM219A 18841.5 5 2 1822.1 112.63 HUMAN 1 -2.3184 -22.4627 RELDEEGSDPPLPGR-p Q9BRJ6;S175-p RELDEEGSDPPLPGR 0.363936786774632 0.261509305475776 0.145333333333333 0.115333333333333 8.14540534121913 7.67459560085214 0.145333333333333 0.115333333333333 0.153270814703148 0.170820677462557 1.66037553165453 1.57817649237423 Q9BRJ6 C7orf50 Q9BRJ6.S175.p_C7orf50 Q9BRJ6_S175s _1_1_175_175 Q9BRJ6 Q9BRJ6 Uncharacterized protein C7orf50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30020.30020.5 18.04 14.96 9.731 2 1 1 0 684.5528 3338.7666 S175s TMT10 157 (R) ELTVQKAEALMRELDEEGsDPPLPGR (A) ELT(0.0)VQKAEALMRELDEEGS(0.99)DPPLPGR K:TMT10,s:Phosphorylated S C7orf50 22140 13 4 1700.1 120.32 HUMAN 1 8.1454 7.6746 RELGVWRSLLRLRAT-p O14523;S68-p RELGVWRSLLRLRAT 0.926116382201679 0.0270981587443738 -0.0146666666666667 0.288333333333333 0.658000110584011 21.2645089873613 -0.0146666666666667 0.288333333333333 0.859409181070224 0.00747393129560992 -0.185744795658979 4.15153504051604 O14523 C2CD2L O14523.S68.p_C2CD2L O14523_S68s _1_1_68_68 O14523 O14523-2 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24260.24260.3 8.91 8.91 99 1 1 1 0 513.2873 1457.879 S68s TMT10 62 (R) ELGVWRsLLR (L) ELGVWRS(1.0)LLR s:Phosphorylated S C2CD2L 76636.4 1 1 411.1 322.51 HUMAN 1 -0.658 21.2645 RELKEQYSDAPEEIR-p Q8NEJ9;S214-p RELKEQYSDAPEEIR 0.471141674992432 0.0710171265246076 -0.143 0.243 6.03251469040498 15.2714284367548 -0.143 0.243 0.249315070269827 0.0297068878262434 -1.29035375595958 2.9275616148033 Q8NEJ9 NGDN Q8NEJ9.S214.p_NGDN Q8NEJ9_S214s _1_1_214_214 Q8NEJ9 Q8NEJ9|Q8NEJ9-2 Neuroguidin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12992.12992.4 13.93 10.91 4.774 2 1 1 0 647.5759 2507.3142 S214s TMT10 208 (R) ELKEQYsDAPEEIRDAR (H) ELKEQY(0.0)S(0.99)DAPEEIRDAR K:TMT10,s:Phosphorylated S NGDN 35893.5 3 3 2339.1 87.27 HUMAN 1 -6.0325 15.2714 RELPAWVSFPDVEKA-p Q9BSJ8-2;S132-p RELPAWVSFPDVEKA 0.149214344489706 0.314233067889566 -0.556 -0.121333333333333 16.6513214570667 6.64397254748406 -0.556 -0.121333333333333 0.0216206055890422 0.21657221845766 -3.19427151928772 -1.39817017650982 Q9BSJ8 ESYT1 Q9BSJ8.2.S132.p_ESYT1 Q9BSJ8-2_S132s _1_1_132_132 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.31937.31937.3 14.07 12.17 99 1 1 1 0 685.6898 1975.0941 S132s TMT10 126 (R) ELPAWVsFPDVEK (A) ELPAWVS(1.0)FPDVEK K:TMT10,s:Phosphorylated S ESYT1 124514 1 2 400.1 328.2 HUMAN 1 -16.6513 -6.644 RELQRANSHFIEEQQ-p O43752;S152-p RELQRANSHFIEEQQ 0.771638354290043 0.13528915323875 0.0456666666666667 -0.234333333333333 2.15633552534844 11.4513647388935 0.0456666666666667 -0.234333333333333 0.608648347828178 0.0715918402698499 0.543151907824792 -2.23432704049013 O43752 STX6 O43752.S152.p_STX6 O43752_S152s _1_1_152_152 O43752 O43752|O43752-2 Syntaxin-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32216.32216.4 20.56 18.64 15.411 3 1 1 0 1119.3279 4394.3244 S152s TMT10 150 (R) ANsHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLK (N) ANS(0.99)HFIEEQQAQQQLIVEQQDEQLELVS(0.0)GS(0.0)IGVLK K:TMT10,s:Phosphorylated S STX6 29232.5 1 3 2488.1 81.33 HUMAN 1 2.1563 -11.4514 RELRSQETPEKPRSS-p Q68DK7;T386-p RELRSQETPEKPRSS 0.81830125880768 0.00562708483008173 -0.0953333333333333 -1.48566666666667 1.67650889296221 32.6035518574284 -0.0953333333333334 -1.48566666666667 0.679749834786024 0.000549091618119548 -0.435908012984474 -7.25224296226985 Q68DK7 MSL1 Q68DK7.T386.p_MSL1 Q68DK7_T386t _1_1_386_386 Q68DK7 Q68DK7|J3KSZ8|J3QQY0|Q68DK7-2|Q68DK7-3 Male-specific lethal 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4930.4930.3 12.18 9.08 2.531 2 1 1 0 537.2831 1529.8688 T386t TMT10 383 (R) SQEtPEKPR (S) S(0.0)QET(0.99)PEKPR K:TMT10,t:Phosphorylated T MSL1 67811.9 2 9 324.1 362.01 HUMAN 1 -1.6765 -32.6036 RELTNRHSLPFSLPS-p P22681;S619-p RELTNRHSLPFSLPS 0.704726707867908 0.370733928265046 -0.075 -0.094 2.85680128490258 5.71573618876607 -0.075 -0.0939999999999999 0.517988206049381 0.268179996716594 -0.691173859515841 -1.23347366614964 P22681 CBL P22681.S619.p_CBL P22681_S619s _1_1_619_619 P22681 P22681|A0A0U1RQX8|A0A0U1RR39 E3 ubiquitin-protein ligase CBL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18512.18512.4 14.33 14.33 1.394 4 1 1 0 721.6031 2803.4308 S619s Hydrogen 613 (R) ELTNRHsLPFSLPSQMEPRPDVPR (L) ELT(0.0)NRHS(0.99)LPFS(0.0)LPS(0.0)QMEPRPDVPR s:Phosphorylated S CBL 100943.3 2 5 741.1 234.1 HUMAN 1 -2.8568 -5.7157 RELVEPLTPSGEAPN-p P00533;T693-p RELVEPLTPSGEAPN 0.244203791569683 0.00917359434218356 -0.195333333333333 -0.437333333333333 11.7100026462458 28.8102906381963 -0.19884779125667 -0.437333333333333 0.0674527616694221 0.00131513681776916 -2.28100026905104 -6.06904017777701 P00533 EGFR P00533.T693.p_EGFR P00533_T693t _1_1_693_693 P00533 P00533|E9PFD7|Q504U8 Epidermal growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24321.24321.3 22.13 22.13 4.628 2 1 1 0 781.7426 2263.2495 T693t TMT10 687 (R) ELVEPLtPSGEAPNQALLR (I) ELVEPLT(0.99)PS(0.0)GEAPNQALLR t:Phosphorylated T EGFR 137698.3 4 1 521.2 283.33 HUMAN 1 -11.71 -28.8103 REMDTARTPLSEAEF-p Q16630-2;T444-p REMDTARTPLSEAEF 0.658328030598573 0.0458129244564755 0.0786666666666666 0.329333333333333 3.40724710496094 17.9165922201106 0.0786666666666666 0.329333333333333 0.45632607913245 0.0161562579318396 0.801981614335942 3.44260289445888 Q16630 CPSF6 Q16630.2.T444.p_CPSF6 Q16630-2_T444t _1_1_444_444 Q16630-2 Q16630-2|Q16630-3|F8WJN3 Isoform 2 of Cleavage and polyadenylation specificity factor subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23631.23631.3 16.92 11.62 2.221 3 1 1 0 893.4055 2598.2377 T444t TMT10 438 (R) EMDTARtPLSEAEFEEIMNR (N) EMDT(0.0)ART(0.99)PLS(0.0)EAEFEEIMNR t:Phosphorylated T CPSF6 63640.9 5 3 1308.1 155.75 HUMAN 1 3.4072 17.9166 REMHRSQSWEERGDR-p Q6Y7W6-5;S160-p REMHRSQSWEERGDR 0.960395582779587 0.458969442393276 -0.00733333333333333 0.0723333333333334 0.33793891517939 4.50912475760646 -0.00733333333333334 0.0723333333333334 0.925137123491979 0.354068690068008 -0.0984262200139946 1.0130934888753 Q6Y7W6 GIGYF2 Q6Y7W6.5.S160.p_GIGYF2 Q6Y7W6-5_S160s _1_1_160_160 Q6Y7W6-5 I1E4Y6|Q6Y7W6-3|Q6Y7W6-5|Q6Y7W6-4 Isoform 4 of GRB10-interacting GYF protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5371.5371.3 10.77 8.39 1.267 2 1 1 0 520.2331 1478.7185 S160s TMT10 158 (R) SQsWEERGDR (R) S(0.0)QS(0.99)WEERGDR s:Phosphorylated S GIGYF2 149826.1 7 5 470.1 302.35 HUMAN 1 -0.3379 4.5091 RENFTAGSDCVTLKV-p Q1W6H9;S241-p RENFTAGSDCVTLKV 0.869882563541638 0.669069046411955 -0.0273333333333333 0.0516666666666667 1.18324838883586 2.38530665839227 -0.0273333333333333 0.0516666666666667 0.761509211542484 0.577390101352861 -0.319233110314412 0.592461879492766 Q1W6H9 FAM110C Q1W6H9.S241.p_FAM110C Q1W6H9_S241s _1_1_241_241 Q1W6H9 Q1W6H9 Protein FAM110C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18253.18253.2 13.08 13.08 2.462 3 1 1 0 990.4813 1899.9886 S241s TMT10 235 (R) ENFTAGsDCVTLK (V) ENFT(0.0)AGS(0.99)DCVT(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM110C 34147.7 3 4 2986.1 64.03 HUMAN 1 -1.1832 2.3853 RENHLRRSIVVIHPD-p O60437;S1657-p RENHLRRSIVVIHPD 0.349528231300178 0.448182445577429 -0.127 -0.0843333333333333 8.47991350988548 4.64651897080723 -0.127 -0.0843333333333333 0.141908578262144 0.343042637607061 -1.71832840781634 -1.03866592909876 O60437 PPL O60437.S1657.p_PPL O60437_S1657s _1_1_1657_1657 O60437 O60437|K7EKI8 Periplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13126.13126.4 20.23 17.61 19.608 3 1 1 0 638.5774 2471.3204 S1657s TMT10 1657 (R) sIVVIHPDTGRELSPEEAHR (A) S(0.99)IVVIHPDT(0.0)GRELS(0.0)PEEAHR s:Phosphorylated S PPL 205313.7 9 6 2268.1 90.52 HUMAN 1 -8.4799 -4.6465 RENKDRLSDSTTGAD-p Q9P0K7;S327-p RENKDRLSDSTTGAD 0.114688242267433 0.00119261798920071 0.460666666666667 1.60366666666667 19.584916460298 48.2279171304698 0.460666666666667 1.60366666666667 0.011002930100284 1.50386304352164e-05 3.79042981460052 14.5321571125106 Q9P0K7 RAI14 Q9P0K7.S327.p_RAI14 Q9P0K7_S327s _1_1_327_327 Q9P0K7 Q9P0K7-2|Q9P0K7-3|Q9P0K7-4 Ankycorbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36231.36231.4 24.2 19.84 1.107 8 1 1 0 986.7505 3864.0126 S327s TMT10 324 (K) DRLsDSTTGADSLLDISSEADQQDLLSLLQAK (V) DRLS(0.99)DS(0.0)T(0.0)T(0.0)GADS(0.0)LLDIS(0.0)S(0.0)EADQQDLLS(0.0)LLQAK K:TMT10,s:Phosphorylated S RAI14 110666.9 5 11 498.1 292.24 HUMAN 1 19.5849 48.2279 RENMEAISPLKNGMV-p O96019;S86-p RENMEAISPLKNGMV 0.207899343804605 0.100472061235096 -0.365333333333333 0.243 13.1599138714464 13.1867284276246 -0.365333333333333 0.243 0.0483068382075945 0.0480094971534969 -2.53992287741417 2.54334999291486 O96019 ACTL6A O96019.S86.p_ACTL6A O96019_S86s _1_1_86_86 O96019 O96019|O96019-2 Actin-like protein 6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17284.17284.3 14.57 14.57 99 1 1 1 0 674.7009 1942.1196 S86s TMT10 77 (R) VPRENMEAIsPLK (N) VPRENMEAIS(1.0)PLK K:TMT10,s:Phosphorylated S ACTL6A 47973.6 5 2 2667.1 74.49 HUMAN 1 -13.1599 13.1867 REPASCESPHLKLLQ-p F5H527;S1310-p REPASCESPHLKLLQ 0.97076436181379 0.00806340809270054 0.007 -0.540666666666667 0.25528460992574 29.8215545270898 0.00699999999999999 -0.540666666666667 0.942912816721184 0.00104194440583608 0.0749954914616866 -6.36799961317012 F5H527 SSH2 F5H527.S1310.p_SSH2 F5H527_S1310s _1_1_1310_1310 F5H527 F5H527|Q76I76 Protein phosphatase Slingshot homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10905.10905.4 9.01 9.01 9.013 2 1 1 0 641.5583 2483.2423 S1310s TMT10 1298 (K) DCLPEREPASCEsPHLK (L) DCLPEREPAS(0.0)CES(0.99)PHLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SSH2 162969.8 1 10 998.1 190.13 HUMAN 1 0.2553 -29.8216 REPGDVATPPRKRKK-p Q9Y5N6;T195-p REPGDVATPPRKRKK 0.567686433414699 0.00112205987963851 0.0756666666666667 -1.317 4.52679773353161 49.3408069506594 0.0756666666666667 -1.317 0.352630787201008 1.16390974644152e-05 1.01658022956396 -15.2506633522136 Q9Y5N6 ORC6 Q9Y5N6.T195.p_ORC6 Q9Y5N6_T195t _1_1_195_195 Q9Y5N6 Q9Y5N6|H3BT22 Origin recognition complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9971.10185.4 15.83 12.26 99 1 1 1 0 626.0882 2421.3614 T195t TMT10 182 (K) IGQQVDREPGDVAtPPRK (R) IGQQVDREPGDVAT(1.0)PPRK K:TMT10,t:Phosphorylated T ORC6 28562.8 8 1 4124.1 37.09 HUMAN 1 4.5268 -49.3408 REPRLMASCHRASRV-p Q9Y3M8;S449-p REPRLMASCHRASRV 0.55827821703547 0.38346600469233 0.0866666666666667 -0.200333333333333 4.67401778763653 5.53202139070629 0.0866666666666667 -0.200333333333333 0.340877409857156 0.279767885815525 1.04396656379399 -1.20045727012496 Q9Y3M8 STARD13 Q9Y3M8.S449.p_STARD13 Q9Y3M8_S449s _1_1_449_449 Q9Y3M8 Q9Y3M8|Q9Y3M8-2|Q9Y3M8-4 StAR-related lipid transfer protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6065.6065.3 11.18 9.17 99 1 1 1 0 395.1818 1103.5651 S449s TMT10 446 (R) LMAsCHR (A) LMAS(1.0)CHR C:Carbamidomethylation,s:Phosphorylated S STARD13 126277.4 1 8 564.1 271.22 HUMAN 1 4.674 -5.532 REPSTPPSPISSSSS-p Q92908;S37-p REPSTPPSPISSSSS 1 0.0515995981725848 -1.85037170770859e-17 -0.341333333333333 0 17.1796803029472 0 -0.341333333333333 1 0.0191439684426565 0 -3.29556413233255 Q92908 GATA6 Q92908.S37.p_GATA6 Q92908_S37s _1_1_37_37 Q92908 Q92908 Transcription factor GATA-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12304.12304.3 15.49 11.99 2.819 10 1 1 0 901.0858 2621.2827 S37s TMT10 26 (R) AFPAREPSTPPsPISSSSSSCSR (G) AFPAREPS(0.0)T(0.0)PPS(0.99)PIS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)CS(0.0)R C:Carbamidomethylation,s:Phosphorylated S GATA6 60830.3 1 1 3524.1 49.06 HUMAN 1 0 -17.1797 REQAPDISPKSDTLT-p Q7Z333-4;S947-p REQAPDISPKSDTLT 0.916017505299201 0.975163564167458 -0.0206666666666667 0.00533333333333334 0.746314495553983 0.154646445173003 -0.0206666666666667 0.00533333333333334 0.842109468399436 0.965017869754796 -0.208974811466596 0.0459200070376321 Q7Z333 SETX Q7Z333.4.S947.p_SETX Q7Z333-4_S947s _1_1_947_947 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17095.17095.4 15.25 9.88 3.059 5 1 1 0 869.9515 3396.8214 S947s TMT10 941 (R) EQAPDIsPKSDTLTDSQIDRDLHK (L) EQAPDIS(0.99)PKS(0.0)DT(0.0)LT(0.0)DS(0.0)QIDRDLHK K:TMT10,s:Phosphorylated S SETX 310728.6 6 6 192.1 463.82 HUMAN 1 -0.7463 0.1546 REQDNSESPNGRTSP-p Q15652;S2047-p REQDNSESPNGRTSP 0.222515442905233 0.129681076821148 0.205666666666667 -0.162333333333333 12.5570877911543 11.6918075977161 0.205666666666667 -0.162333333333333 0.0554997747979295 0.0677359521903628 2.43155434612278 -2.27668431885247 Q15652 JMJD1C Q15652.S2047.p_JMJD1C Q15652_S2047s _1_1_2047_2047 Q15652 Q15652|Q15652-3|A0A1W2PNZ9 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13806.13806.4 15.34 9.88 2.271 3 1 1 0 814.1507 3173.6075 S2047s TMT10 2029 (K) ELTLENQIKEEREQDNSEsPNGR (T) ELT(0.0)LENQIKEEREQDNS(0.0)ES(0.99)PNGR K:TMT10,s:Phosphorylated S JMJD1C 286573.8 3 17 377.1 336.35 HUMAN 1 12.5571 -11.6918 REQFDTLTPEPPVDP-p Q6PKG0;T724-p REQFDTLTPEPPVDP 0.425435984446429 0.709472918052616 -0.107 -0.0436666666666667 6.83769832737159 2.050442761245 -0.107 -0.0436666666666667 0.20712387724797 0.623671249241558 -1.43257217546673 -0.51988327242398 Q6PKG0 LARP1 Q6PKG0.T724.p_LARP1 Q6PKG0_T724t _1_1_724_724 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22339.22339.4 16.86 14.46 1.716 2 1 1 0 742.1106 2885.4519 T724t TMT10 718 (R) EQFDTLtPEPPVDPNQEVPPGPPR (F) EQFDT(0.0)LT(0.99)PEPPVDPNQEVPPGPPR t:Phosphorylated T LARP1 123907.4 4 52 28.1 931.95 HUMAN 1 -6.8377 -2.0504 REQFRVASLHTRTRS-p Q9H1K0;S541-p REQFRVASLHTRTRS 0.168729110694674 0.155747705674919 0.298333333333333 -0.272333333333333 15.4177041830244 10.619553125758 0.298333333333333 -0.272333333333333 0.0287229856795901 0.0867051087774521 2.95716525474883 -2.08867990633016 Q9H1K0 RBSN Q9H1K0.S541.p_RBSN Q9H1K0_S541s _1_1_541_541 Q9H1K0 Q9H1K0 Rabenosyn-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5973.5973.3 10.62 10.62 5.558 2 1 1 0 364.8635 1012.6101 S541s TMT10 539 (R) VAsLHTR (T) VAS(0.99)LHT(0.0)R s:Phosphorylated S RBSN 89666.9 1 4 972.1 193.2 HUMAN 1 15.4177 -10.6196 REQKEFQSPASKSPK-p Q9H6E5;S133-p REQKEFQSPASKSPK 0.503727443653237 0.00121782159184786 -0.126 -1.044 5.49683381913157 47.9272490764932 -0.126 -1.044 0.282043839456822 1.61166617923184e-05 -1.19437676027889 -14.3436727681215 Q9H6E5 TUT1 Q9H6E5.S133.p_TUT1 Q9H6E5_S133s _1_1_133_133 Q9H6E5 F5H0R1|Q9H6E5|H3BRB1 Speckle targeted PIP5K1A-regulated poly(A) polymerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9883.9883.2 10.92 7.03 1.579 2 1 1 0 716.3681 1351.7622 S133s TMT10 130 (K) EFQsPASK (S) EFQS(0.99)PAS(0.0)K K:TMT10,s:Phosphorylated S TUT1 95043.4 4 2 2113.1 97.04 HUMAN 1 -5.4968 -47.9272 REQSGTPSCENLKMS-p Q8NEV8;S1310-p REQSGTPSCENLKMS 0.647680844341622 0.127212784009323 0.0613333333333333 -0.168666666666667 3.5336857674993 11.8037810680247 0.0613333333333333 -0.168666666666667 0.443232322155556 0.0660118483363445 0.826873248513051 -2.29645458667274 Q8NEV8 EXPH5 Q8NEV8.S1310.p_EXPH5 Q8NEV8_S1310s _1_1_1310_1310 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9534.9534.3 7.09 7.09 2.373 3 1 1 0 629.9697 1807.926 S1310s TMT10 1304 (R) EQSGTPsCENLK (M) EQS(0.0)GT(0.0)PS(0.99)CENLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EXPH5 223884.5 1 19 129.1 537.25 HUMAN 1 3.5337 -11.8038 REQSTLESEEWNPWE-p Q9Y2B1;S63-p REQSTLESEEWNPWE 0.539805799310612 0.183771933753545 0.0856666666666667 0.228666666666667 4.94573716579096 9.67483877655572 0.0856666666666667 0.228666666666667 0.320203653899202 0.107774526216445 1.09410469853846 1.92452010228556 Q9Y2B1 TMEM5 Q9Y2B1.S63.p_TMEM5 Q9Y2B1_S63s _1_1_63_63 Q9Y2B1 Q9Y2B1|F5GXF8 UDP-D-xylose:ribitol-5-phosphate beta1,4-xylosyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17746.17751.4 23.53 17.15 3.434 3 1 1 0 881.651 3443.614 S63s TMT10 57 (R) EQSTLEsEEWNPWEGDEKNEQQHR (F) EQS(0.0)T(0.0)LES(0.99)EEWNPWEGDEKNEQQHR K:TMT10,s:Phosphorylated S TMEM5 51658.3 4 1 3703.1 44.92 HUMAN 1 4.9457 9.6748 REQTLSPTITSGLHN-p D6REX3;T1196-p REQTLSPTITSGLHN 0.966490451651987 0.0799587703347656 -0.012 -0.222333333333333 0.286093715303712 14.5585727164719 -0.012 -0.222333333333333 0.936247408224794 0.0350060193370291 -0.0837748621938462 -2.79430584926246 D6REX3 NotFound D6REX3.T1196.p_NotFound D6REX3_T1196t _1_1_1196_1196 D6REX3 D6REX3|O94979-8|O94979-2|O94979-9|O94979-4|O94979-10|O94979-3|O94979-6|O94979-7|H7BXG7 Protein transport protein Sec31A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18632.18632.4 7.18 7.18 1.123 5 1 1 0 604.8282 2336.3248 T1196t TMT10 1188 (K) LREQTLSPtITSGLHNIAR (S) LREQT(0.0)LS(0.0)PT(0.99)IT(0.0)S(0.0)GLHNIAR t:Phosphorylated T SEC31A 137193.7 1 8 665.1 250.42 HUMAN 1 -0.2861 -14.5586 RERARKLSQGILIIR-p P13994;S40-p RERARKLSQGILIIR 0.0530637440823008 0.0177866148377142 -0.493 -0.337 27.7285978193819 24.1073133253045 -0.493 -0.337 0.0016870976405902 0.00388390561627559 -5.76972775024744 -4.81544954104862 P13994 CCDC130 P13994.S40.p_CCDC130 P13994_S40s _1_1_40_40 P13994 P13994 Coiled-coil domain-containing protein 130 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22073.22073.3 9.91 9.91 99 1 1 1 0 560.3518 1599.0722 S40s TMT10 38 (R) KLsQGILIIR (F) KLS(1.0)QGILIIR K:TMT10,s:Phosphorylated S CCDC130 45258 1 1 3212.1 57.26 HUMAN 1 -27.7286 -24.1073 RERASEYSPASLDAF-p P17029;S548-p RERASEYSPASLDAF 0.259805946096148 0.00203605351766751 -0.231 0.778333333333333 11.1037555517632 41.9771462411354 -0.231 0.778333333333333 0.0775576148831438 6.34286365355226e-05 -2.17429646633966 11.0574148870583 P17029 ZKSCAN1 P17029.S548.p_ZKSCAN1 P17029_S548s _1_1_548_548 P17029 P17029|E9PC66|B3KRF7 Zinc finger protein with KRAB and SCAN domains 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.34622.34622.3 13.89 13.89 2.286 4 1 1 0 771.3917 2232.1953 S548s TMT10 544 (R) ASEYsPASLDAFGAFLK (S) AS(0.0)EY(0.0)S(0.99)PAS(0.0)LDAFGAFLK K:TMT10,s:Phosphorylated S ZKSCAN1 64598.8 2 4 2843.1 68.21 HUMAN 1 -11.1038 41.9771 RERDGEQSPNVSLMQ-p Q58WW2-3;S336-p RERDGEQSPNVSLMQ 0.787817207878045 0.629153190308922 0.0446666666666667 0.0576666666666667 1.99936974480357 2.73585644274535 0.0446666666666667 0.0576666666666667 0.631048916677834 0.532616180334766 0.50866246129824 0.666142536778289 Q58WW2 DCAF6 Q58WW2.3.S336.p_DCAF6 Q58WW2-3_S336s _1_1_336_336 Q58WW2-3 Q58WW2-3|Q58WW2-4|Q58WW2-2|F2Z305 Isoform 3 of DDB1- and CUL4-associated factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12411.12411.3 12.16 12.16 4.526 2 1 1 0 590.6077 1689.8428 S336s TMT10 332 (R) DGEQsPNVSLMQR (M) DGEQS(0.99)PNVS(0.0)LMQR s:Phosphorylated S DCAF6 107567.4 3 2 2596.1 77.25 HUMAN 1 1.9994 2.7359 RERDHSPTPSVFNSD-p Q6UN15;T494-p RERDHSPTPSVFNSD 0.622172474425454 0.259813345728376 0.082 0.276 3.83021533942103 7.71143842656769 0.082 0.276 0.413979147678855 0.169377671182114 0.884532759888327 1.5845760054018 Q6UN15 FIP1L1 Q6UN15.T494.p_FIP1L1 Q6UN15_S492sT494t_2_2_492_494 Q6UN15 Q6UN15|Q6UN15-5|Q6UN15-3 Pre-mRNA 3'-end-processing factor FIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10140.10707.3 12.29 12.29 1.503 5 2 2 0 732.6192 2035.9104 S492s T494t Hydrogen 490 (R) DHsPtPSVFNSDEERYR (Y) DHS(0.99)PT(0.99)PS(0.0)VFNS(0.0)DEERY(0.0)R s:Phosphorylated S,t:Phosphorylated T FIP1L1 66639.3 19 15 404.1 326.66 HUMAN 1 3.8302 7.7114 REREHCDTEGEADDF-p Q9H8M2;T103-p REREHCDTEGEADDF 0.18142186480323 0.0123824029349833 -0.430333333333333 0.552 14.6009840926765 26.618635992722 -0.430333333333333 0.552 0.034665829026982 0.00217839384240618 -2.80394500980432 5.45836378936064 Q9H8M2 BRD9 Q9H8M2.T103.p_BRD9 Q9H8M2_T103t _1_1_103_103 Q9H8M2 Q9H8M2 Bromodomain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10716.10716.3 19.68 19.68 99 1 1 1 0 787.332 2280.0127 T103t TMT10 99 (R) EHCDtEGEADDFDPGK (K) EHCDT(1.0)EGEADDFDPGK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T BRD9 67341.2 6 2 1044.1 184.76 HUMAN 1 -14.601 26.6186 REREKEPSRERDIAK-p Q8NI27;S1364-p REREKEPSRERDIAK 0.948131958402904 0.180897348270083 -0.0136666666666667 0.136 0.459366461206926 9.76637350560372 -0.0136666666666667 0.136 0.89962880773791 0.10552677100422 -0.132165515763088 1.94038454089761 Q8NI27 THOC2 Q8NI27.S1364.p_THOC2 Q8NI27_S1364s _1_1_1364_1364 Q8NI27 Q8NI27|A0A0C4DG98|Q8NI27-2 THO complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5113.5113.5 9.51 6.04 99 1 1 1 0 445.8508 2145.2595 S1364s TMT10 1360 (R) EKEPsRERDIAK (E) EKEPS(1.0)RERDIAK K:TMT10,s:Phosphorylated S THOC2 184654.1 6 7 512.1 287.1 HUMAN 1 -0.4594 9.7664 REREKRFSFFKKNK_-p O15020;S2384-p REREKRFSFFKKNK_ 0.373673559607983 0.0207353276371136 0.204333333333333 -0.482 7.92297899654851 23.0273353924616 0.204333333333333 -0.482 0.161325158454216 0.00498042564554205 1.62179662285166 -4.55578218012601 O15020 SPTBN2 O15020.S2384.p_SPTBN2 O15020_S2384s _1_1_2384_2384 O15020 O15020 Spectrin beta chain, non-erythrocytic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17921.17921.4 7.9 7.9 99 1 1 1 0 432.5054 1647.0349 S2384s TMT10 2382 (K) RFsFFKK (N) RFS(1.0)FFKK K:TMT10,s:Phosphorylated S SPTBN2 272689.3 1 16 781.1 225.92 HUMAN 1 7.923 -23.0273 RERENMDTDDERQYQ-p Q96D46;T433-p RERENMDTDDERQYQ 0.536977434631499 0.410613446303059 0.110666666666667 -0.0913333333333333 4.99647961484315 5.14328205017599 0.110666666666667 -0.0913333333333333 0.316484203733378 0.305965032088571 1.10341293316023 -1.13001763809827 Q96D46 NMD3 Q96D46.T433.p_NMD3 Q96D46_T433t _1_1_433_433 Q96D46 C9JA08|Q96D46 60S ribosomal export protein NMD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26037.26037.5 25.91 25.91 9.121 2 1 1 0 814.7733 3989.8711 T433t TMT10 427 (R) ERENMDtDDERQYQDFLEDLEEDEAIRK (N) ERENMDT(0.99)DDERQY(0.0)QDFLEDLEEDEAIRK K:TMT10,t:Phosphorylated T NMD3 58800.3 3 4 1402.1 146.41 HUMAN 1 4.9965 -5.1433 RERERDHSPTPSVFN-p Q6UN15;S492-p RERERDHSPTPSVFN 0.826341992390725 0.0274331134885319 0.039 0.303333333333333 1.59807892512132 21.1833476336255 0.039 0.303333333333333 0.692137065780331 0.00761491809765315 0.417832023857969 4.1334749172025 Q6UN15 FIP1L1 Q6UN15.S492.p_FIP1L1 Q6UN15_S492s _1_1_492_492 Q6UN15 Q6UN15|Q6UN15-5|Q6UN15-3 Pre-mRNA 3'-end-processing factor FIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8096.8096.4 19.36 15.61 2.575 5 1 1 0 658.3019 2550.2171 S492s TMT10 488 (R) ERDHsPTPSVFNSDEERYR (Y) ERDHS(0.99)PT(0.0)PS(0.0)VFNS(0.0)DEERY(0.0)R s:Phosphorylated S FIP1L1 66639.3 29 11 404.1 326.66 HUMAN 1 1.5981 21.1833 RERGLGRSDFGRDRG-p P49750-4;S1160-p RERGLGRSDFGRDRG 0.27252742529443 0.170389705584643 -0.399333333333333 -0.186 10.6945071716569 10.1043212835669 -0.399333333333333 -0.186 0.0852215213501847 0.0976265341485064 -2.10267164824453 -1.99902269712085 P49750 YLPM1 P49750.4.S1160.p_YLPM1 P49750-4_S1160s _1_1_1160_1160 P49750-4 P49750-4|P49750-3 Isoform 4 of YLP motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8143.8143.3 11.62 11.62 99 1 1 1 0 425.2133 1193.6588 S1160s TMT10 1156 (R) GLGRsDFGR (D) GLGRS(1.0)DFGR s:Phosphorylated S YLPM1 241869.3 2 13 669.1 249.34 HUMAN 1 -10.6945 -10.1043 RERGRLGSPHRRPLS-p Q6UUV9;S113-p RERGRLGSPHRRPLS 0.80237851235545 0.17481165115692 0.0776666666666666 -0.195666666666667 1.84132396861086 9.96168496371587 0.0776666666666667 -0.195666666666667 0.654436635347835 0.100886139488385 0.473368124677262 -1.97425965016457 Q6UUV9 CRTC1 Q6UUV9.S113.p_CRTC1 Q6UUV9_S113s _1_1_113_113 Q6UUV9 Q6UUV9-2|Q6UUV9-3|M0QX46|M0QXN6 CREB-regulated transcription coactivator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.4848.4848.3 10.69 7.54 7.076 2 1 1 0 590.9913 1690.9914 S113s Hydrogen 111 (R) LGsPHRRPLSVDK (H) LGS(0.99)PHRRPLS(0.0)VDK K:TMT10-Lys-Only,s:Phosphorylated S CRTC1 67412.7 5 2 1799.1 114.19 HUMAN 1 1.8413 -9.9617 RERHRPSSPRAGAPH-p Q9H9J4;S1116-p RERHRPSSPRAGAPH 0.0745793811074775 0.542644163048135 0.61 0.103666666666667 24.1464064999645 3.57233974741397 0.61 0.103666666666667 0.00384910138038184 0.439304877596878 4.83078595126895 0.834314607006566 Q9H9J4 USP42 Q9H9J4.S1116.p_USP42 Q9H9J4_S1116s _1_1_1116_1116 Q9H9J4 Q9H9J4|Q9H9J4-2 Ubiquitin carboxyl-terminal hydrolase 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.0374.0632.3 7.03 0.62 1.391 2 1 1 0 382.5307 1065.6115 S1116s TMT10 1112 (R) HRPSsPR (A) HRPS(0.0)S(0.99)PR s:Phosphorylated S USP42 146872.9 1 8 255.1 399.37 HUMAN 1 24.1464 3.5723 RERLISDSVERDRDR-p Q5T200;S1366-p RERLISDSVERDRDR 0.449347026753219 0.134656528963281 0.143666666666667 -0.274 6.41767115450755 11.4773875873974 0.143666666666667 -0.274 0.228156520254679 0.0711641458780933 1.35864294618964 -2.23890521274811 Q5T200 ZC3H13 Q5T200.S1366.p_ZC3H13 Q5T200_S1366s _1_1_1366_1366 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5532.5532.5 7.21 3.49 2.764 2 1 1 0 463.2319 2232.1642 S1366s TMT10 1362 (R) LISDsVERDRDRDRDR (T) LIS(0.0)DS(0.99)VERDRDRDRDR s:Phosphorylated S ZC3H13 197316.7 3 29 24.1 987.82 HUMAN 1 6.4177 -11.4774 RERLLLASFKNEGAE-p Q9UNK0;S96-p RERLLLASFKNEGAE 0.33341548273698 0.00568317461142871 -0.173333333333333 0.537 8.90506530103145 32.5286480450469 -0.173333333333333 0.539155708391637 0.128674790519067 0.000558644073086463 -1.79192921410699 7.2271747297632 Q9UNK0 STX8 Q9UNK0.S96.p_STX8 Q9UNK0_S96s _1_1_96_96 Q9UNK0 Q9UNK0 Syntaxin-8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27967.27967.3 14.96 14.96 99 1 1 1 0 808.781 2344.3641 S96s TMT10 92 (R) LLLAsFKNEGAEPDLIR (S) LLLAS(1.0)FKNEGAEPDLIR K:TMT10,s:Phosphorylated S STX8 27020.3 1 1 3806.1 42.69 HUMAN 1 -8.9051 32.5286 RERLVLGSARNSSIS-p Q13610;S480-p RERLVLGSARNSSIS 0.76119081695692 0.780644778098735 0.0533333333333333 -0.0343333333333333 2.27460398269912 1.48850673775725 0.0533333333333334 -0.0343333333333333 0.592297093825835 0.709821788533824 0.568791421592994 -0.392251136953025 Q13610 PWP1 Q13610.S480.p_PWP1 Q13610_S480s _1_1_480_480 Q13610 Q13610|B4DJV5 Periodic tryptophan protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15105.15105.2 8.42 3.53 99 1 1 1 0 512.7921 944.609 S480s TMT10 476 (R) LVLGsAR (N) LVLGS(1.0)AR s:Phosphorylated S PWP1 56397.4 1 3 2267.1 90.54 HUMAN 1 2.2746 -1.4885 RERPGLGSNPCIPFF-p Q08379;S981-p RERPGLGSNPCIPFF 0.175020786098606 0.063731285855024 -0.294333333333333 -0.267666666666667 15.0808683982047 15.9190071003383 -0.294333333333333 -0.267666666666667 0.0310393887463489 0.0255917090688387 -2.89363191433785 -3.0505122280218 Q08379 GOLGA2 Q08379.S981.p_GOLGA2 Q08379_S981s _1_1_981_981 Q08379 Q08379|Q08379-2|A0A087WYC0 Golgin subfamily A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23186.23186.4 13.37 9.25 10.204 2 1 1 0 837.9092 3268.6461 S981s TMT10 975 (R) ERPGLGsNPCIPFFYRADENDEVK (I) ERPGLGS(0.99)NPCIPFFY(0.0)RADENDEVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GOLGA2 113711.9 3 11 458.1 306.2 HUMAN 1 -15.0809 -15.919 RERQELGSPEERLQD-p V9GYM8;S977-p RERQELGSPEERLQD 0.569246194913171 0.994086658918334 0.0926666666666667 -0.00133333333333333 4.50271984994435 0.0362530009576212 0.0926666666666667 -0.00133333333333338 0.354591250317846 0.991687182193657 1.01208546368012 -0.0109077061182114 V9GYM8 NotFound V9GYM8.S977.p_NotFound V9GYM8_S977s_1_1_977_977 V9GYM8 V9GYM8|Q92974|Q92974-2|Q92974-3 Rho guanine nucleotide exchange factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.12194.12194.3 23.01 23.01 2.379 7 1 1 0 995.4 2921.2515 Q973q S977s Hydrogen 973 (R) qELGsPEERLQDSSDPDTGSEEEGSSR (L) Q(1.0)ELGS(0.99)PEERLQDS(0.0)S(0.0)DPDT(0.0)GS(0.0)EEEGS(0.0)S(0.0)R q:Pyroglutamic acid,s:Phosphorylated S ARHGEF2 117095.6 8 19 380.1 335.31 HUMAN 1 4.5027 -0.0363 RERRLPSSPASPSPK-p Q9H4G0;S541-p RERRLPSSPASPSPK 0.283769579718898 0.989115464344108 0.172333333333333 0.00166666666666669 10.3323113043163 0.0712714872167688 0.172333333333333 0.0016666666666667 0.0926336698108671 0.983723058258583 2.03950807978623 0.0213592936005919 Q9H4G0 EPB41L1 Q9H4G0.S541.p_EPB41L1 Q9H4G0_S541s _1_1_541_541 Q9H4G0 Q9H4G0|A0A0C4DH22|Q9H4G0-2|Q9H4G0-3|Q9H4G0-4 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9336.9336.3 8.63 5.84 1.153 4 1 1 0 587.9938 1682.0001 S541s TMT10 537 (R) RLPSsPASPSPK (G) RLPS(0.0)S(0.99)PAS(0.0)PS(0.0)PK K:TMT10,s:Phosphorylated S EPB41L1 99071.6 3 11 174.1 483.37 HUMAN 1 10.3323 0.0713 RERSKDASPINRWSP-p Q13523;S431-p RERSKDASPINRWSP 0.177952626351024 0.126857062437182 0.234333333333333 0.229333333333333 14.8316433162686 11.8204244740851 0.234333333333333 0.229333333333333 0.0328727221050692 0.0657593561828432 2.84693497258132 2.29939568843457 Q13523 PRPF4B Q13523.S431.p_PRPF4B Q13523_S431s _1_1_431_431 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5379.5379.2 9.35 3.88 99 1 1 1 0 541.2653 1001.5577 S431s TMT10 429 (K) DAsPINR (W) DAS(1.0)PINR s:Phosphorylated S PRPF4B 117327.1 5 22 70.1 666.55 HUMAN 1 14.8316 11.8204 RERSSSASSPEMKDG-p Q9UQ35;S1423-p RERSSSASSPEMKDG 0.0378666968430127 0.00804251812163316 0.599333333333333 0.567 32.3841391464362 29.8434240079848 0.599333333333333 0.567 0.00057754534174692 0.00103671074355044 7.19160269536556 6.37459130513259 Q9UQ35 SRRM2 Q9UQ35.S1423.p_SRRM2 Q9UQ35_S1423sS1424s_2_2_1423_1424 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13233.13233.3 7.14 7.14 1.823 5 2 2 0 723.0032 2007.0581 S1423s S1424s TMT10 1419 (R) SSSAssPEMKDGLPR (T) S(0.0)S(0.0)S(0.0)AS(0.99)S(0.99)PEMKDGLPR K:TMT10,s:Phosphorylated S SRRM2 300351.7 5 208 2.1 3310.34 HUMAN 1 32.3841 29.8434 RERYRQRSPSPAPAP-p Q9H7N4;S498-p RERYRQRSPSPAPAP 0.524103697486929 0.726507044659559 0.0853333333333333 -0.036 5.19077103426917 1.90892038494241 0.0853333333333333 -0.036 0.30263760860628 0.644329419815217 1.13890574756975 -0.488480201815334 Q9H7N4 SCAF1 Q9H7N4.S498.p_SCAF1 Q9H7N4_S498s _1_1_498_498 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7503.7503.3 22.85 22.85 1.217 3 1 1 0 759.7276 2197.2039 S498s TMT10 496 (R) QRsPSPAPAPAPAAAAGPPTR (K) QRS(0.99)PS(0.0)PAPAPAPAAAAGPPT(0.0)R s:Phosphorylated S SCAF1 139895 3 6 76.1 647.25 HUMAN 1 5.1908 -1.9089 RESEALDSPNSKGEG-p P0C7T5;S289-p RESEALDSPNSKGEG 0.334837228172211 0.129930819366306 0.135666666666667 0.18 8.86773317968538 11.680705833674 0.135666666666667 0.18 0.129785651648807 0.067909325455344 1.78546706412416 2.27472574802453 P0C7T5 ATXN1L P0C7T5.S289.p_ATXN1L P0C7T5_S289s_1_1_289_289 P0C7T5 P0C7T5 Ataxin-1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.33739.33739.3 13.12 13.12 1.89 6 1 1 0 1471.3835 4331.1866 S289s N291n TMT10 283 (R) ESEALDsPnSKGEGQGLVPVVECVVDGQLFSGSQTPR (V) ES(0.0)EALDS(0.99)PN(1.0)S(0.0)KGEGQGLVPVVECVVDGQLFS(0.0)GS(0.0)QT(0.0)PR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated ATXN1L 73818.4 7 5 1155.1 171.78 HUMAN 1 8.8677 11.6807 RESGKASSSLGLQDF-p P41743;S247-p RESGKASSSLGLQDF 0.354713371481854 0.0680675435857707 -0.260666666666667 0.279333333333333 8.3650720843664 15.5264324240964 -0.260666666666667 0.279333333333333 0.145711151933624 0.0280128152865157 -1.69843919261578 2.97575352428988 P41743 PRKCI P41743.S247.p_PRKCI P41743_S247s _1_1_247_247 P41743 P41743 Protein kinase C iota type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30903.30903.2 12.53 5.29 1.127 3 1 1 0 915.9634 1750.9537 S247s TMT10 245 (K) ASsSLGLQDFDLLR (V) AS(0.0)S(0.99)S(0.0)LGLQDFDLLR s:Phosphorylated S PRKCI 69231.1 10 2 1048.1 184.27 HUMAN 1 -8.3651 15.5264 RESHTPVSIQEEIVG-p Q12830;S742-p RESHTPVSIQEEIVG 0.652424715540653 0.00343840613820786 0.0626666666666667 0.614333333333333 3.47823743615645 36.8360996210839 0.0626666666666667 0.614333333333333 0.448927548112448 0.00020720013683986 0.815980911854731 8.79536944527981 Q12830 BPTF Q12830.S742.p_BPTF Q12830_T739tS742s_2_2_739_742 Q12830 Q12830|Q12830-4|A0A0A0MR81 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24825.24825.4 12.67 12.67 1.36 3 2 2 0 897.6678 3427.7018 T739t S742s TMT10 726 (K) AADDPENGERESHtPVsIQEEIVGDFK (S) AADDPENGERES(0.0)HT(0.99)PVS(0.99)IQEEIVGDFK K:TMT10,t:Phosphorylated T,s:Phosphorylated S BPTF 340995.1 7 29 94.1 610.41 HUMAN 1 3.4782 36.8361 RESIPAKSPVPGVDP-p O75376-2;S1549-p RESIPAKSPVPGVDP 0.565175512627497 0.132867178357594 0.105 -0.182666666666667 4.56558544246732 11.5536480775893 0.105 -0.182666666666667 0.349495393357076 0.0699254374926189 1.02381153218623 -2.25233005552526 O75376 NCOR1 O75376.2.S1549.p_NCOR1 O75376-2_S1549s _1_1_1549_1549 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17259.17259.5 19.91 19.91 4.272 4 1 1 0 666.1496 3246.7424 S1549s TMT10 1543 (R) ESIPAKsPVPGVDPVVSHSPFDPHHR (G) ES(0.0)IPAKS(0.99)PVPGVDPVVS(0.0)HS(0.0)PFDPHHR K:TMT10,s:Phosphorylated S NCOR1 259453.1 3 18 35.1 889.74 HUMAN 1 4.5656 -11.5536 RESKLFITDEEVGPE-p Q9NR82-2;T863-p RESKLFITDEEVGPE 0.139286671509888 0.431682571034523 0.252 0.0923333333333334 17.5215462969899 4.86120659109019 0.252 0.0923333333333334 0.0176947882667773 0.326497109575156 3.36607444315746 1.07834819683852 Q9NR82 KCNQ5 Q9NR82.2.T863.p_KCNQ5 Q9NR82-2_T863t _1_1_863_863 Q9NR82-2 Q9NR82-6|A0A0A0MRC8|Q9NR82-3|A0A0A0MSD9|Q9NR82-7|F8WEA4|Q9NR82-2|A0A0A0MSC0 Isoform 2 of Potassium voltage-gated channel subfamily KQT member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28063.28063.3 21.62 21.5 3.845 4 1 1 0 1063.1615 3107.4894 T863t TMT10 860 (K) LFItDEEVGPEETETDTFDAAPQPAR (E) LFIT(0.99)DEEVGPEET(0.0)ET(0.0)DT(0.0)FDAAPQPAR t:Phosphorylated T KCNQ5 102286.2 1 6 2456.1 82.72 HUMAN 1 17.5215 4.8612 RESPSYDTPSQRVQF-p Q9Y6M7-13;T98-p RESPSYDTPSQRVQF 0.13430679397205 0.00393884678471773 0.302666666666667 -0.831666666666667 17.8866280715139 35.4606713056059 0.302666666666667 -0.831666666666667 0.0162681134664013 0.000284402146218538 3.43935727031235 -8.26535811934409 Q9Y6M7 SLC4A7 Q9Y6M7.13.T98.p_SLC4A7 Q9Y6M7-13_S93sT98t_2_2_93_98 Q9Y6M7-13 Q9Y6M7-7|Q9Y6M7-6|Q9Y6M7-9|Q9Y6M7-2|Q9Y6M7-10|Q9Y6M7-14|Q9Y6M7-11|Q9Y6M7-8|E9PFN4|Q9Y6M7-12|A0A0A0MST8|Q9Y6M7-13 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4479.4479.5 12.37 8 1.131 6 2 2 0 758.1753 3626.918 S93s T98t TMT10 80 (R) RKDKESDKEDGREsPSYDtPSQR (V) RKDKES(0.0)DKEDGRES(0.99)PS(0.0)Y(0.0)DT(0.99)PS(0.0)QR K:TMT10,s:Phosphorylated S,t:Phosphorylated T SLC4A7 128884.6 2 21 207.1 445.25 HUMAN 1 17.8866 -35.4607 RESRQPPTPPPRTCF-p Q96PE2;T170-p RESRQPPTPPPRTCF 0.186994852223034 0.0439115843580118 0.215333333333333 0.403666666666667 14.3107968279418 18.1834657023611 0.215333333333333 0.403666666666667 0.0370612716851826 0.0151933460548716 2.75016200488655 3.49659138123593 Q96PE2 ARHGEF17 Q96PE2.T170.p_ARHGEF17 Q96PE2_T170t _1_1_170_170 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5904.5904.3 10.2 10.2 99 1 1 1 0 400.2116 1118.652 T170t TMT10 167 (R) QPPtPPPR (T) QPPT(1.0)PPPR t:Phosphorylated T ARHGEF17 223779.6 5 5 30.1 908.19 HUMAN 1 14.3108 18.1835 RESSAMASPLPREME-p Q9C0C2;S14-p RESSAMASPLPREME 0.208094276358716 0.357108983053956 0.198 0.122 13.1499108756807 5.93164627274273 0.198 0.122 0.0484182303693646 0.255173383787774 2.53811548155862 1.27207796015239 Q9C0C2 TNKS1BP1 Q9C0C2.S14.p_TNKS1BP1 Q9C0C2_S14s _1_1_14_14 Q9C0C2 Q9C0C2|E9PKK0 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11583.11583.3 12.3 12.3 6.18 3 1 1 0 485.5683 1374.7249 S14s TMT10 8 (R) ESSAMAsPLPR (E) ES(0.0)S(0.0)AMAS(0.99)PLPR s:Phosphorylated S TNKS1BP1 182819.3 2 1 4.1 2105.7 HUMAN 1 13.1499 5.9316 RESSANNSVSPSESL-p H0YL70;S211-p RESSANNSVSPSESL 0.295243174589512 0.496219580390538 -0.167333333333333 0.0813333333333334 9.9806408499202 4.07017363728183 -0.167333333333333 0.0813333333333334 0.100446755895664 0.391726215008037 -1.97834729619714 0.93036018547231 H0YL70 TLE3 H0YL70.S211.p_TLE3 H0YL70_S211sS213s_2_2_211_213 H0YL70 H0YL70|H0YKN8|H0YKT5|Q04726|Q04726-4|Q04726-5|Q04726-6|Q04726-3|Q04726-7|Q04726-2 Transducin-like enhancer protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9687.9687.2 13.84 13.84 1.396 6 2 2 0 976.9144 1792.8875 S211s S213s TMT10 205 (R) ESSANNsVsPSESLR (A) ES(0.0)S(0.0)ANNS(0.99)VS(0.99)PS(0.0)ES(0.0)LR s:Phosphorylated S TLE3 85275.2 5 12 447.1 309.48 HUMAN 1 -9.9806 4.0702 RESSRSHSVFNIKLV-p Q02241;S303-p RESSRSHSVFNIKLV 0.28377835512685 0.575281894935857 0.171 -0.0573333333333333 10.322932631078 3.2383899755651 0.171 -0.0573333333333333 0.0928339301656456 0.474417829707809 2.0378750056325 -0.768316838366495 Q02241 KIF23 Q02241.S303.p_KIF23 Q02241_S303s _1_1_303_303 Q02241 Q02241|H7BYN4|Q02241-2|Q02241-3 Kinesin-like protein KIF23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13890.13890.3 8.06 8.06 2.145 2 1 1 0 490.6027 1389.8255 S303s TMT10 301 (R) SHsVFNIK (L) S(0.0)HS(0.99)VFNIK K:TMT10,s:Phosphorylated S KIF23 111083.9 1 5 352.1 350.35 HUMAN 1 10.3229 -3.2384 RESSSSRSPTPKQKK-p Q9UQ35;S182-p RESSSSRSPTPKQKK 0.14685232684758 0.0407186857143957 0.246333333333333 0.299333333333333 16.9216885862763 18.63691862794 0.246333333333333 0.299333333333333 0.0203156696104537 0.013686995901418 3.24722656303969 3.58926166070539 Q9UQ35 SRRM2 Q9UQ35.S182.p_SRRM2 Q9UQ35_S182s _1_1_182_182 Q9UQ35 Q9UQ35|Q9UQ35-2|Q9UQ35-3|A0A087X1W1 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3996.3996.3 8.54 8.54 1.574 6 1 1 0 567.6256 1620.8957 S182s TMT10 176 (R) ESSSSRsPTPK (Q) ES(0.0)S(0.0)S(0.0)S(0.0)RS(0.99)PT(0.0)PK K:TMT10,s:Phosphorylated S SRRM2 300351.7 1 2 2.1 3310.34 HUMAN 1 16.9217 18.6369 RETEPLVSPHQDKLM-p Q9BYW2;S754-p RETEPLVSPHQDKLM 0.352523805432325 0.0355714734653244 -0.188666666666667 -0.347666666666667 8.41108806476059 19.5025120504697 -0.188666666666667 -0.347666666666667 0.144175409472413 0.0112136964293076 -1.70640933335409 -3.76957228308138 Q9BYW2 SETD2 Q9BYW2.S754.p_SETD2 Q9BYW2_S754s _1_1_754_754 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13216.13216.5 15.41 15.41 8.103 4 1 1 0 596.5195 2898.5928 S754s TMT10 741 (K) KSESPFRETEPLVsPHQDK (L) KS(0.0)ES(0.0)PFRET(0.0)EPLVS(0.99)PHQDK K:TMT10,s:Phosphorylated S SETD2 290615.4 3 14 58.1 711.11 HUMAN 1 -8.4111 -19.5025 RETGTEHSPGVQPAD-p E9PNP3;S65-p RETGTEHSPGVQPAD 0.222927229268876 0.044570876291453 -0.234333333333333 0.433 12.5382149263876 18.0854416871779 -0.234333333333333 0.433 0.0557414815165815 0.0155401723571432 -2.42817908044059 3.47671436107976 E9PNP3 AAMDC E9PNP3.S65.p_AAMDC E9PNP3_S65s _1_1_65_65 E9PNP3 K4DI89|E9PNP3 Mth938 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16355.16355.4 15.28 15.28 2.424 4 1 1 0 734.3616 2854.4524 S65s TMT10 54 (R) TWDWRETGTEHsPGVQPADVK (E) T(0.0)WDWRET(0.0)GT(0.0)EHS(0.99)PGVQPADVK K:TMT10,s:Phosphorylated S AAMDC 15701.7 1 1 4514.1 30.44 HUMAN 1 -12.5382 18.0854 RETLSQISDDLLIPG-p Q6P3S1;S711-p RETLSQISDDLLIPG 0.432138626621738 0.791409097629011 -0.332666666666667 -0.032 6.7093568993507 1.4137524926006 -0.332666666666667 -0.032 0.213336079653807 0.722145568879841 -1.41003548206781 -0.374629956776463 Q6P3S1 DENND1B Q6P3S1.S711.p_DENND1B Q6P3S1_S711s _1_1_711_711 Q6P3S1 Q6P3S1 DENN domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31690.31690.3 16.36 12.88 3.623 3 1 1 0 712.7118 2056.1488 S711s TMT10 705 (R) ETLSQIsDDLLIPGLGR (H) ET(0.0)LS(0.0)QIS(0.99)DDLLIPGLGR s:Phosphorylated S DENND1B 87405.8 1 5 1975.1 104.63 HUMAN 1 -6.7094 -1.4138 RETSKVIYDFIEKTG-p O00401;Y256-p RETSKVIYDFIEKTG 0.21223423524631 0.333682754659385 -0.202333333333333 -0.144333333333333 12.9932040533786 6.31782553987887 -0.202333333333333 -0.144333333333333 0.0501972117651476 0.233462668913962 -2.50984240158152 -1.34065523545327 O00401 WASL O00401.Y256.p_WASL O00401_Y256y _1_1_256_256 O00401 O00401 Neural Wiskott-Aldrich syndrome protein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.32477.33185.2 14.56 6.05 99 1 1 1 0 782.9274 1484.8765 Y256y TMT10 254 (K) VIyDFIEK (T) VIY(1.0)DFIEK K:TMT10,y:Phosphorylated Y WASL 55225.3 3 1 248.1 14.56 HUMAN 1 -12.9932 -6.3178 REVEVKLTPLILKPF-p Q14739;T118-p REVEVKLTPLILKPF 0.297581492283108 0.00169413652665426 0.201666666666667 -0.914333333333333 9.89836060396603 44.0127889634334 0.201666666666667 -0.914333333333333 0.102367934283641 3.96936561865391e-05 1.96405751092106 -12.0923424901087 Q14739 LBR Q14739.T118.p_LBR Q14739_T118t _1_1_118_118 Q14739 Q14739 Lamin-B receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29635.29635.4 11.56 9.01 1.638 3 1 1 0 752.6937 2927.7901 T118t TMT10 112 (R) EVEVKLtPLILKPFGNSISR (Y) EVEVKLT(0.99)PLILKPFGNS(0.0)IS(0.0)R K:TMT10,t:Phosphorylated T LBR 71101.3 1 6 1716.1 119.76 HUMAN 1 9.8984 -44.0128 REVKKDLSQLQENLK-p Q8IX12;S1091-p REVKKDLSQLQENLK 0.560899556742354 0.220440594086202 -0.0866666666666667 0.141 4.62506074612328 8.64607764516704 -0.0866666666666667 0.141 0.344741784528598 0.136581612416471 -1.03487744836637 1.74649634133963 Q8IX12 CCAR1 Q8IX12.S1091.p_CCAR1 Q8IX12_S1091s _1_1_1091_1091 Q8IX12 Q8IX12|Q8IX12-2 Cell division cycle and apoptosis regulator protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22705.22705.3 11.54 8.03 99 1 1 1 0 575.9781 1645.9525 S1091s TMT10 1089 (K) DLsQLQENLK (I) DLS(1.0)QLQENLK K:TMT10,s:Phosphorylated S CCAR1 133503.3 2 11 1111.1 176.02 HUMAN 1 -4.6251 8.6461 REVKQKISPYFKSND-p Q9Y2M0;S126-p REVKQKISPYFKSND 0.59955563859167 0.00278908336687029 -0.0926666666666667 -0.773 4.10430648520808 38.654119659677 -0.0926666666666666 -0.773 0.388659557143049 0.00013632893249232 -0.937016090124414 -9.54217726274013 Q9Y2M0 FAN1 Q9Y2M0.S126.p_FAN1 Q9Y2M0_S126s _1_1_126_126 Q9Y2M0 Q9Y2M0|Q9Y2M0-2|H3BQ24 Fanconi-associated nuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15927.15927.3 9.71 9.71 1.496 2 1 1 0 593.3453 1698.0557 S126s TMT10 123 (K) QKIsPYFK (S) QKIS(0.99)PY(0.0)FK K:TMT10,s:Phosphorylated S FAN1 116048.4 2 2 1860.1 110.7 HUMAN 1 -4.1043 -38.6541 REWLEKES_______-p Q8NFU3;S115-p REWLEKES_______ 0.813480829172188 0.235864285172606 0.0383333333333333 0.205333333333333 1.72201014198639 8.26058526745311 0.0383333333333333 0.205333333333333 0.67266523956848 0.14925932499624 0.446319513459965 1.67978674220449 Q8NFU3 TSTD1 Q8NFU3.S115.p_TSTD1 Q8NFU3_S115s _1_1_115_115 Q8NFU3 Q8NFU3|Q8NFU3-2|R4GNF9 Thiosulfate:glutathione sulfurtransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20840.20840.3 12.51 12.51 12.514 3 1 1 0 752.0372 2174.1282 S115s TMT10 102 (R) NYAGAYREWLEKEs (-) NY(0.0)AGAY(0.0)REWLEKES(0.99) K:TMT10,s:Phosphorylated S TSTD1 12587.1 2 3 3768.1 43.57 HUMAN 1 1.722 8.2606 REYDSGDTDEIIAMK-p Q76FK4;T381-p REYDSGDTDEIIAMK 0.390342873465048 0.618028835500003 0.119666666666667 -0.0536666666666667 7.55116399744985 2.84068149219345 0.119666666666667 -0.0536666666666667 0.175745251784779 0.5199144054877 1.55718760992154 -0.687769253939046 Q76FK4 NOL8 Q76FK4.T381.p_NOL8 Q76FK4_S378sT381t_2_2_378_381 Q76FK4 Q76FK4 Nucleolar protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18358.18358.3 12.39 12.39 5.691 3 2 2 0 787.6562 2201.023 S378s T381t Hydrogen 372 (R) NDREYDsGDtDEIIAMK (K) NDREY(0.0)DS(0.99)GDT(0.99)DEIIAMK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T NOL8 132527 3 10 605.1 262.45 HUMAN 1 7.5512 -2.8407 REYEKRVSAIVEQSW-p P49459;S142-p REYEKRVSAIVEQSW 0.857856311166697 0.0237986460494067 0.0386666666666667 -0.343333333333333 1.29729821425912 22.1353144799835 0.0386666666666667 -0.343333333333333 0.741771560670938 0.00611601514250562 0.346875349232818 -4.34830634246988 P49459 UBE2A P49459.S142.p_UBE2A P49459_S142s _1_1_142_142 P49459 P49459|A0A0R4J2E5|P49459-2|A0A0D9SG71|P49459-3 Ubiquitin-conjugating enzyme E2 A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19020.19020.3 7.21 7.21 7.208 2 1 1 0 638.977 1834.9431 S142s TMT10 140 (K) RVsAIVEQSWRDC (-) RVS(0.99)AIVEQS(0.0)WRDC C:Carbamidomethylation,s:Phosphorylated S UBE2A 17429.2 1 1 7226.1 7.21 HUMAN 1 1.2973 -22.1353 REYQQRNSPGVPTGA-p Q08379;S37-p REYQQRNSPGVPTGA 0.628647939920457 0.00248947575194659 -0.0716666666666667 -0.713 3.74586941536092 39.8219210861918 -0.0716666666666667 -0.713 0.422097770719538 0.000104185646594647 -0.868229551125946 -10.0515500164898 Q08379 GOLGA2 Q08379.S37.p_GOLGA2 Q08379_S37s _1_1_37_37 Q08379 Q08379|R4GND7 Golgin subfamily A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9058.9058.2 15.31 9.86 8.028 2 1 1 0 733.3944 1385.8153 S37s TMT10 36 (R) NsPGVPTGAK (K) NS(0.99)PGVPT(0.0)GAK K:TMT10,s:Phosphorylated S GOLGA2 113711.9 11 1 458.1 306.2 HUMAN 1 -3.7459 -39.8219 RFAILKESPRSLLAQ-p Q5T5U3;S1526-p RFAILKESPRSLLAQ 0.529434722423025 0.0121852547555142 -0.110666666666667 -0.467 5.11049202473045 26.7258342322873 -0.110666666666667 -0.467 0.308283866678993 0.00212528206252279 -1.1242683281084 -5.48710855420355 Q5T5U3 ARHGAP21 Q5T5U3.S1526.p_ARHGAP21 Q5T5U3_S1526s _1_1_1526_1526 Q5T5U3 Q5T5U3|A0A087WW76 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19164.19164.3 10.31 5.47 99 1 1 1 0 533.6405 1518.9408 S1526s TMT10 1520 (R) FAILKEsPR (S) FAILKES(1.0)PR K:TMT10,s:Phosphorylated S ARHGAP21 218696.3 2 22 148.1 512.52 HUMAN 1 -5.1105 -26.7258 RFAIQDISVEETSAK-p O43707;S159-p RFAIQDISVEETSAK 0.375072477437412 0.00463734855393385 0.142 0.571333333333333 7.88586880983664 34.1471532195235 0.142 0.571333333333333 0.162709578117477 0.0003848439628431 1.61535548056613 7.78546814075284 O43707 ACTN4 O43707.S159.p_ACTN4 O43707_S159s _1_1_159_159 O43707 A0A087WSZ2|P12814-4|P12814-3|O43707|Q08043|P35609|P35609-2|P12814-2|H9KV75 Alpha-actinin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33713.33713.4 19.16 19.16 4.124 3 1 1 0 808.6696 3151.6862 S159s TMT10 153 (R) FAIQDIsVEETSAKEGLLLWCQR (K) FAIQDIS(0.99)VEET(0.0)S(0.0)AKEGLLLWCQR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ACTN4 105308.6 3 2 1097.1 178.17 HUMAN 1 7.8859 34.1472 RFASYRTSFSVGSDD-p Q9NRY4;S1174-p RFASYRTSFSVGSDD 0.301590454921122 0.745063438987604 -0.161 0.0446666666666667 9.76684162739786 1.76402717047501 -0.161 0.0446666666666667 0.105515396989313 0.666188732378438 -1.94122987012366 0.455835241377734 Q9NRY4 ARHGAP35 Q9NRY4.S1174.p_ARHGAP35 Q9NRY4_S1174s _1_1_1174_1174 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21963.21963.2 9.23 9.23 1.246 4 1 1 0 944.9516 1808.9228 S1174s TMT10 1173 (R) TsFSVGSDDELGPIR (K) T(0.0)S(0.99)FS(0.0)VGS(0.0)DDELGPIR s:Phosphorylated S ARHGAP35 172051.4 6 12 247.1 410.47 HUMAN 1 -9.7668 1.764 RFCFEVVSPTKSCML-p Q15057;S334-p RFCFEVVSPTKSCML 0.729757185802638 0.782724922388387 -0.0546666666666667 0.0443333333333333 2.59628905742582 1.47337330254259 -0.0546666666666667 0.0443333333333333 0.550010644078312 0.712299549621993 -0.63714959605359 0.388697213776721 Q15057 ACAP2 Q15057.S334.p_ACAP2 Q15057_S334s _1_1_334_334 Q15057 Q15057|A0A087X1H5 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26018.26018.3 10.55 10.55 2.536 2 1 1 0 584.6337 1671.918 S334s TMT10 328 (R) FCFEVVsPTK (S) FCFEVVS(0.99)PT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ACAP2 88997 1 2 629.1 257.13 HUMAN 1 -2.5963 1.4734 RFDFGEDSEHSEEPK-p A0A0A0MT33;S351-p RFDFGEDSEHSEEPK 0.886483152928741 0.00402946944258155 0.025 0.667666666666667 1.01995940963619 35.2972847479316 0.025 0.667666666666667 0.790686017935567 0.000295305492878859 0.278877568815942 8.20430081959738 A0A0A0MT33 SCAF8 A0A0A0MT33.S351.p_SCAF8 A0A0A0MT33_S351s _1_1_351_351 A0A0A0MT33 A0A0A0MT33|Q9UPN6-2 Protein SCAF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17592.17592.5 15.74 15.74 4.265 2 1 1 0 613.5028 2983.5074 S351s TMT10 341 (K) LMDRFDFGEDsEHSEEPKK (E) LMDRFDFGEDS(0.99)EHS(0.0)EEPKK K:TMT10,s:Phosphorylated S SCAF8 149312.7 2 2 2085.1 98.15 HUMAN 1 1.02 35.2973 RFEGKSCSPLAFSAF-p Q96EY5;S232-p RFEGKSCSPLAFSAF 0.0499167591004882 0.00725773005840269 -0.475666666666667 -0.455666666666667 28.7682655942424 30.6039162797483 -0.475666666666667 -0.455666666666667 0.00132792467408308 0.000870178546683513 -6.06594502749788 -6.60724015482936 Q96EY5 MVB12A Q96EY5.S232.p_MVB12A Q96EY5_S232s _1_1_232_232 Q96EY5 Q96EY5|Q96EY5-2 Multivesicular body subunit 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33344.33344.2 16.13 16.13 2.663 4 1 1 0 1126.573 2172.1775 S232s TMT10 230 (K) SCsPLAFSAFGDLTIK (S) S(0.0)CS(0.99)PLAFS(0.0)AFGDLT(0.0)IK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MVB12A 29124.8 7 6 1382.1 148.21 HUMAN 1 -28.7683 -30.6039 RFEINLISPDTKSVV-p O60343-2;S370-p RFEINLISPDTKSVV 0.406964394863387 0.798601580015462 -0.243666666666667 -0.0986666666666667 7.21062848160143 1.36651604102207 -0.243666666666667 -0.0986666666666667 0.190080318863741 0.730042924021089 -1.49783458434491 -0.36340848450163 O60343 TBC1D4 O60343.2.S370.p_TBC1D4 O60343-2_S370s _1_1_370_370 O60343-2 O60343|O60343-3|O60343-2 Isoform 2 of TBC1 domain family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28785.28785.3 12.45 8.02 3.346 2 1 1 0 605.662 1735.0042 S370s TMT10 364 (R) FEINLIsPDTK (S) FEINLIS(0.99)PDT(0.0)K K:TMT10,s:Phosphorylated S TBC1D4 141150.8 1 5 603.1 262.97 HUMAN 1 -7.2106 -1.3665 RFFDENESPVDPQHG-p Q6P4E1;S366-p RFFDENESPVDPQHG 0.632242831940884 0.127027967606568 0.100666666666667 -0.264333333333333 3.70927483821283 11.8124860087956 0.100666666666667 -0.264333333333333 0.425669483222516 0.065879667581383 0.861132623460592 -2.29799277868358 Q6P4E1 CASC4 Q6P4E1.S366.p_CASC4 Q6P4E1_S366s _1_1_366_366 Q6P4E1 Q6P4E1|Q6P4E1-5 Protein CASC4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16573.16573.3 14.61 14.61 14.609 2 1 1 0 791.0389 2291.1344 S366s TMT10 360 (R) FFDENEsPVDPQHGSK (L) FFDENES(0.99)PVDPQHGS(0.0)K K:TMT10,s:Phosphorylated S CASC4 48977.6 1 4 2657.1 74.96 HUMAN 1 3.7093 -11.8125 RFFSSETTAAHSLVG-p Q9HC98-2;T236-p RFFSSETTAAHSLVG 0.744043857023488 0.357800455290477 -0.045 0.14 2.43809265520459 5.92122210151884 -0.045 0.14 0.570414733371767 0.255786600398677 -0.60377457049673 1.27021876077295 Q9HC98 NEK6 Q9HC98.2.T236.p_NEK6 Q9HC98-2_T235tT236tS240s_3_3_235_240 Q9HC98-2 Q9HC98-2|Q9HC98-4|Q9HC98-3 Isoform 2 of Serine/threonine-protein kinase Nek6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30011.30011.3 8.56 8.56 1.204 9 3 3 0 1016.4224 2807.3548 T235t T236t S240s TMT10 230 (R) FFSSEttAAHsLVGTPYYMSPER (I) FFS(0.0)S(0.0)ET(0.99)T(0.99)AAHS(0.99)LVGT(0.0)PY(0.0)Y(0.0)MS(0.0)PER t:Phosphorylated T,s:Phosphorylated S NEK6 40528.1 2 4 5385.1 19.8 HUMAN 1 -2.4381 5.9212 RFGDSSDSDNGFSST-p Q8IU60;S249-p RFGDSSDSDNGFSST 0.789959591016176 0.580305896452006 -0.0446666666666667 -0.053 1.97717748570462 3.18900202934628 -0.0446666666666667 -0.053 0.634281802107529 0.479843699845242 -0.50374187836201 -0.758435768938513 Q8IU60 DCP2 Q8IU60.S249.p_DCP2 Q8IU60_S249s _1_1_249_249 Q8IU60 Q8IU60|Q8IU60-2 m7GpppN-mRNA hydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13991.13991.4 21.34 21.34 1.467 9 1 1 0 861.1763 3361.7115 S249s TMT10 242 (R) RFGDSSDsDNGFSSTGSTPAKPTVEK (L) RFGDS(0.0)S(0.0)DS(0.99)DNGFS(0.0)S(0.0)T(0.0)GS(0.0)T(0.0)PAKPT(0.0)VEK K:TMT10,s:Phosphorylated S DCP2 49026.8 8 2 1279.1 158.9 HUMAN 1 -1.9772 -3.189 RFGVRGRSPGQLQRP-p O75382;S529-p RFGVRGRSPGQLQRP 0.952809813911717 0.227758379286963 -0.00966666666666667 0.146666666666667 0.413796388765987 8.46389047266426 -0.00966666666666667 0.146666666666667 0.90911821874982 0.142433108558209 -0.11959572791265 1.71497656258057 O75382 TRIM3 O75382.S529.p_TRIM3 O75382_S529s _1_1_529_529 O75382 O75382|O75382-2|A0A1W2PPI7|O75382-3|O75382-4 Tripartite motif-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16899.16899.4 27.1 21.03 2.303 4 1 1 0 849.1728 3313.7086 S529s TMT10 527 (R) GRsPGQLQRPTGVAVDTNGDIIVADYDNR (W) GRS(0.99)PGQLQRPT(0.0)GVAVDT(0.0)NGDIIVADY(0.0)DNR s:Phosphorylated S TRIM3 81912.1 3 6 1265.1 160.44 HUMAN 1 -0.4138 8.4639 RFHGRAFSDPFVEAE-p P34932;S76-p RFHGRAFSDPFVEAE 0.478118474358418 0.109719779064839 -0.135 0.236 5.8971486508982 12.6753945713712 -0.135 0.236 0.257208392353232 0.0540083044146204 -1.26621974319128 2.45143093024384 P34932 HSPA4 P34932.S76.p_HSPA4 P34932_S76s _1_1_76_76 P34932 P34932|A0A087WYC1|A0A087WTS8|P34932-2 Heat shock 70 kDa protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24142.24142.2 17.57 17.57 99 1 1 1 0 889.4442 1697.9151 S76s TMT10 74 (R) AFsDPFVEAEK (S) AFS(1.0)DPFVEAEK K:TMT10,s:Phosphorylated S HSPA4 95185.1 2 6 549.1 274.67 HUMAN 1 -5.8971 12.6754 RFHHPKLSSLHRENF-p A2RU49;S167-p RFHHPKLSSLHRENF 0.290079611219067 0.0125314297512915 0.164666666666667 0.502 10.1299179195715 26.5352941643233 0.164666666666667 0.502 0.0970528309782659 0.00222060126850885 2.00429095712158 5.43609284792885 A2RU49 HYKK A2RU49.S167.p_HYKK A2RU49_S167s_1_1_167_167 A2RU49 A2RU49|A0A0C4DGM4|A2RU49-3 Hydroxylysine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15494.15494.3 7.34 0.34 4.96 2 1 1 0 766.408 2215.2752 S167s N173n N177n TMT10 166 (K) LsSLHREnFIWnLK (N) LS(0.99)S(0.0)LHREN(1.0)FIWN(1.0)LK K:TMT10,s:Phosphorylated S,n:Deamidated HYKK 42217.6 1 2 6187.1 13.34 HUMAN 1 10.1299 26.5353 RFIGSPRTPVSPVKF-p P23443-2;T421-p RFIGSPRTPVSPVKF 0.00874686268802314 0.000952253650599092 -1.36333333333333 -1.50366666666667 50.7081113017169 56.6665686518865 -1.36333333333333 -1.50366666666667 8.49549854471229e-06 2.15448331345081e-06 -16.2313360301232 -20.9128980705849 P23443 RPS6KB1 P23443.2.T421.p_RPS6KB1 P23443-2_T421tS424s_2_2_421_424 P23443-2 P23443|P23443-2|P23443-5|P23443-3 Isoform Alpha II of Ribosomal protein S6 kinase beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19025.19025.4 9.32 8.79 2.219 3 2 2 0 501.5184 1843.1206 T421t S424s TMT10 415 (R) FIGSPRtPVsPVK (F) FIGS(0.0)PRT(0.99)PVS(0.99)PVK K:TMT10,t:Phosphorylated T,s:Phosphorylated S RPS6KB1 56530.6 4 10 1663.1 122.57 HUMAN 1 -50.7081 -56.6666 RFIIGSVSEDNSEDE-p Q13085;S25-p RFIIGSVSEDNSEDE 0.80410604882838 0.992869511264831 -0.053 0.00133333333333335 1.82615375586354 0.0444734750404987 -0.053 0.00133333333333332 0.656726625921523 0.989811858269134 -0.469948823407096 0.0133685795839218 Q13085 ACACA Q13085.S25.p_ACACA Q13085_S25sS29s_2_2_25_29 Q13085 Q13085-4|A0A087WYK6|A0A087X126|A0A087X2F8 Acetyl-CoA carboxylase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36852.36852.4 24.13 24.13 1.153 4 2 2 0 971.4897 3723.0195 S25s S29s TMT10 19 (R) FIIGSVsEDNsEDEISNLVKLDLLEEK (E) FIIGS(0.0)VS(0.99)EDNS(0.99)EDEIS(0.0)NLVKLDLLEEK K:TMT10,s:Phosphorylated S ACACA 267260.7 17 12 860.1 210.55 HUMAN 1 -1.8262 0.0445 RFIPRPPSVAPPPMV-p Q9Y2T7;S189-p RFIPRPPSVAPPPMV 0.622172474425454 0.165843518491649 -0.117 -0.144666666666667 3.83079304429969 10.2606365435088 -0.117 -0.144666666666667 0.413924083228952 0.0941751554296287 -0.884644167442776 -2.0261869777506 Q9Y2T7 YBX2 Q9Y2T7.S189.p_YBX2 Q9Y2T7_S189s _1_1_189_189 Q9Y2T7 Q9Y2T7 Y-box-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25810.25810.5 24.61 17.1 24.265 4 1 1 0 708.3761 3457.903 S189s TMT10 183 (R) FIPRPPsVAPPPMVAEIPSAGTGPGSKGER (A) FIPRPPS(0.99)VAPPPMVAEIPS(0.0)AGT(0.0)GPGS(0.0)KGER K:TMT10,s:Phosphorylated S YBX2 38574.3 6 22 929.3 199.34 HUMAN 1 -3.8308 -10.2606 RFIQRHDSLSSVPSS-p Q8N9U0;S191-p RFIQRHDSLSSVPSS 0.262997981631407 0.082233593590898 0.276333333333333 -0.291333333333333 11.0049949322798 14.3760342114567 0.276333333333333 -0.291333333333333 0.0793415182601407 0.0365087176506596 2.15698443800385 -2.76051414328667 Q8N9U0 TC2N Q8N9U0.S191.p_TC2N Q8N9U0_S191s _1_1_191_191 Q8N9U0 Q8N9U0|Q8N9U0-2 Tandem C2 domains nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9446.9446.3 10.87 10.87 2.419 8 1 1 0 762.707 2206.1414 S191s TMT10 185 (R) FIQRHDsLSSVPSSSSSR (K) FIQRHDS(0.99)LS(0.0)S(0.0)VPS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)R s:Phosphorylated S TC2N 55796.6 1 6 1080.1 179.95 HUMAN 1 11.005 -14.376 RFITEPVSGAEMGTL-p Q9P2M7;S22-p RFITEPVSGAEMGTL 0.19060140727462 0.355920090740489 0.202333333333333 -0.137666666666667 14.0816940496388 5.95119069575155 0.202333333333333 -0.137666666666667 0.039068847047053 0.254027614807082 2.70793001378178 -1.27556258247571 Q9P2M7 CGN Q9P2M7.S22.p_CGN Q9P2M7_S22s _1_1_22_22 Q9P2M7 Q9P2M7|Q9P2M7-2 Cingulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24386.24386.3 14.94 14.94 2.688 3 1 1 0 639.652 1836.9727 S22s TMT10 16 (R) FITEPVsGAEMGTLR (R) FIT(0.0)EPVS(0.99)GAEMGT(0.0)LR s:Phosphorylated S CGN 136611.7 3 1 239.1 416.31 HUMAN 1 14.0817 -5.9512 RFKRRHRSEDCGGGP-p Q9UGU0;S1792-p RFKRRHRSEDCGGGP 0.459914950679283 0.0320825732477169 0.416333333333333 -0.698666666666667 6.21897802351932 20.1653123821926 0.416333333333333 -0.698666666666667 0.238837324587111 0.00962650768305127 1.32348044482318 -3.91082015319786 Q9UGU0 TCF20 Q9UGU0.S1792.p_TCF20 Q9UGU0_S1792s _1_1_1792_1792 Q9UGU0 Q9UGU0|Q9UGU0-2|A9JX13 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.2073.2234.3 9.1 9.1 99 1 1 1 0 512.8915 1456.6913 S1792s TMT10 1790 (R) HRsEDCGGGPR (S) HRS(1.0)EDCGGGPR C:Carbamidomethylation,s:Phosphorylated S TCF20 213250.7 1 27 197.1 457.96 HUMAN 1 6.219 -20.1653 RFLKRTLSNESEESV-p Q8NHM5;S474-p RFLKRTLSNESEESV 0.222927229268876 0.415366170516702 0.257666666666667 -0.0923333333333333 12.5380549676941 5.07539042459103 0.257666666666667 -0.0923333333333334 0.0557435346162948 0.310785649828115 2.42815047740915 -1.11762723542976 Q8NHM5 KDM2B Q8NHM5.S474.p_KDM2B Q8NHM5_S474s _1_1_474_474 Q8NHM5 Q8NHM5|Q8NHM5-3|Q8NHM5-2|Q8NHM5-4|F6SRV7|Q8NHM5-5|S4R3G4 Lysine-specific demethylase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8082.8082.2 12.94 12.94 1.829 4 1 1 0 766.3576 1451.7427 S474s Hydrogen 472 (R) TLsNESEESVK (S) T(0.0)LS(0.99)NES(0.0)EES(0.0)VK K:TMT10-Lys-Only,s:Phosphorylated S KDM2B 155065.3 4 3 800.1 223.19 HUMAN 1 12.5381 -5.0754 RFLLPRLSPKPVRVC-p Q96S99;S197-p RFLLPRLSPKPVRVC 0.468720713206654 0.0133279730379841 0.105666666666667 0.375 6.07555785850892 26.0790446246546 0.105666666666667 0.375 0.246856299350418 0.00246658188438617 1.2980124240762 5.31534962123155 Q96S99 PLEKHF1 Q96S99.S197.p_PLEKHF1 Q96S99_S197s _1_1_197_197 Q96S99 Q96S99 Pleckstrin homology domain-containing family F member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22649.22649.4 11.5 7.28 99 1 1 1 0 491.0526 1881.2202 S197s TMT10 191 (R) FLLPRLsPKPVR (V) FLLPRLS(1.0)PKPVR K:TMT10,s:Phosphorylated S PLEKHF1 31878.6 1 1 4605.1 28.85 HUMAN 1 6.0756 26.079 RFLSLEYSPAGKEYV-p Q9C0H5-2;S388-p RFLSLEYSPAGKEYV 0.710316644870655 0.0011424964448981 -0.061 -1.194 2.7938174173884 48.7883604414613 -0.061 -1.194 0.525555104129707 1.32179454692943e-05 -0.678213862524098 -14.8898363664607 Q9C0H5 ARHGAP39 Q9C0H5.2.S388.p_ARHGAP39 Q9C0H5-2_S388s _1_1_388_388 Q9C0H5-2 Q9C0H5-2 Isoform 2 of Rho GTPase-activating protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26624.26624.3 12.37 12.37 3.52 3 1 1 0 583.979 1669.9565 S388s TMT10 382 (R) FLSLEYsPAGK (E) FLS(0.0)LEY(0.0)S(0.99)PAGK K:TMT10,s:Phosphorylated S ARHGAP39 126053.9 2 8 910.1 201.84 HUMAN 1 -2.7938 -48.7884 RFLVHRYSVLQQHAE-p Q99523;S793-p RFLVHRYSVLQQHAE 0.33047015237505 0.43910939708751 -0.238333333333333 -0.104666666666667 8.98625799577658 4.76218599249224 -0.238333333333333 -0.104666666666667 0.126291522944926 0.334026867495375 -1.80598397155399 -1.06008590496651 Q99523 SORT1 Q99523.S793.p_SORT1 Q99523_S793s _1_1_793_793 Q99523 Q99523|Q99523-2 Sortilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19621.19621.5 17.36 17.36 9.074 5 1 1 0 807.0086 3951.0513 S793s TMT10 787 (R) FLVHRYsVLQQHAEANGVDGVDALDTASHTNK (S) FLVHRY(0.0)S(0.99)VLQQHAEANGVDGVDALDT(0.0)AS(0.0)HT(0.0)NK K:TMT10,s:Phosphorylated S SORT1 93035.9 2 2 2296.1 89.31 HUMAN 1 -8.9863 -4.7622 RFQELLASPAYRASP-p Q9NSI2;S203-p RFQELLASPAYRASP 0.253428545649867 0.124079610166788 -0.194666666666667 -0.193333333333333 11.3596185270098 11.9579051116607 -0.194666666666667 -0.193333333333333 0.073120330766166 0.0637102763426624 -2.21923565993924 -2.32371570143968 Q9NSI2 FAM207A Q9NSI2.S203.p_FAM207A Q9NSI2_S203s _1_1_203_203 Q9NSI2 Q9NSI2|Q9NSI2-2 Protein FAM207A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24761.24761.2 12.27 12.27 7.601 2 1 1 0 802.4088 1523.8419 S203s TMT10 197 (R) FQELLAsPAYR (A) FQELLAS(0.99)PAY(0.0)R s:Phosphorylated S FAM207A 25455.8 2 5 3498.1 49.73 HUMAN 1 -11.3596 -11.9579 RFQFSLGSEEHLDAP-p O75161;S451-p RFQFSLGSEEHLDAP 0.296434678159557 0.13191790542463 0.167333333333333 0.218666666666667 9.94623559705244 11.5967880059061 0.167333333333333 0.218666666666667 0.101245665709622 0.0692342830735082 1.97237122813077 2.25993001935472 O75161 NPHP4 O75161.S451.p_NPHP4 O75161_S451s _1_1_451_451 O75161 O75161|O75161-2 Nephrocystin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25659.25659.3 20.18 20.18 2.178 4 1 1 0 970.8151 2830.4663 S451s TMT10 445 (R) FQFSLGsEEHLDAPTEPVSGPK (V) FQFS(0.0)LGS(0.99)EEHLDAPT(0.0)EPVS(0.0)GPK K:TMT10,s:Phosphorylated S NPHP4 158850.4 2 2 3191.1 58.08 HUMAN 1 9.9462 11.5968 RFQKASVSGPNSPSE-p O15344;S92-p RFQKASVSGPNSPSE 0.311874595590947 0.166565653829041 0.143 0.162333333333333 9.46594037700418 10.237221833519 0.143 0.162333333333333 0.113085249954804 0.0946842659586948 1.88905574769009 2.02211612085006 O15344 MID1 O15344.S92.p_MID1 O15344_S92s _1_1_92_92 O15344 O15344|O15344-2|A0A087X255 E3 ubiquitin-protein ligase Midline-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4603.4603.3 15.52 9.31 1.144 5 1 1 0 585.2867 1673.8768 S92s TMT10 89 (K) ASVsGPNSPSETRR (E) AS(0.0)VS(0.99)GPNS(0.0)PS(0.0)ET(0.0)RR s:Phosphorylated S MID1 76961 1 3 2821.1 69.37 HUMAN 1 9.4659 10.2372 RFQPGYRS_______-p P28482;S360-p RFQPGYRS_______ 0.968657168836587 0.039972888530597 -0.00966666666666666 -0.319333333333333 0.271520762659793 18.7495828133071 -0.00966666666666666 -0.319333333333333 0.939394306628891 0.0133364953743309 -0.0796290085140462 -3.61247336072922 P28482 MAPK1 P28482.S360.p_MAPK1 P28482_S360s _1_1_360_360 P28482 P28482|P28482-2 Mitogen-activated protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9490.9490.2 10.12 10.12 4.863 2 1 1 0 582.2761 1083.5785 S360s TMT10 354 (R) FQPGYRs (-) FQPGY(0.0)RS(0.99) s:Phosphorylated S MAPK1 41788.3 1 3 3319.1 54 HUMAN 1 -0.2715 -18.7496 RFRDRSFSEGGERLL-p Q07352;S92-p RFRDRSFSEGGERLL 0.016158495038515 0.00262293931700471 -1.01333333333333 -0.861 41.9926115249525 39.3085019513606 -1.01333333333333 -0.861 6.32031680101703e-05 0.000117259977053999 -11.0922800689501 -9.82464127594065 Q07352 ZFP36L1 Q07352.S92.p_ZFP36L1 Q07352_S92s _1_1_92_92 Q07352 Q07352 mRNA decay activator protein ZFP36L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6625.6625.2 10.45 7.1 1.724 2 1 1 0 589.2578 1097.5425 S92s TMT10 90 (R) SFsEGGER (L) S(0.0)FS(0.99)EGGER s:Phosphorylated S ZFP36L1 36769.3 3 9 1672.2 122.01 HUMAN 1 -41.9926 -39.3085 RFRGRYRSPYSGPKF-p Q14498;S97-p RFRGRYRSPYSGPKF 0.744474740122106 0.380840065198391 0.045 0.094 2.43201681419974 5.56955017894897 0.045 0.094 0.571213310102132 0.277360736650374 0.602483625196289 1.2072150952204 Q14498 RBM39 Q14498.S97.p_RBM39 Q14498_S97s _1_1_97_97 Q14498 Q14498|Q14498-2|G3XAC6 RNA-binding protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4751.4751.2 12.3 12.3 3.355 4 1 1 0 682.3338 1283.6946 S97s Hydrogen 95 (R) YRsPYSGPK (F) Y(0.0)RS(0.99)PY(0.0)S(0.0)GPK K:TMT10-Lys-Only,s:Phosphorylated S RBM39 59663.8 27 2 915.1 200.83 HUMAN 1 2.432 5.5696 RFRLRLESYISQQKT-p Q8TD43;S255-p RFRLRLESYISQQKT 0.171029955711038 0.00825803939985841 -0.294333333333333 -0.513666666666667 15.2987898434574 29.6348503246015 -0.294333333333333 -0.513666666666667 0.0295203169228273 0.00108771462401897 -2.93467957825447 -6.31194586270572 Q8TD43 TRPM4 Q8TD43.S255.p_TRPM4 Q8TD43_S255s _1_1_255_255 Q8TD43 Q8TD43|Q8TD43-3|Q8TD43-2 Transient receptor potential cation channel subfamily M member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20870.20870.3 12.58 12.58 3.509 3 1 1 0 635.0199 1823.0791 S255s TMT10 251 (R) LRLEsYISQQK (T) LRLES(0.99)Y(0.0)IS(0.0)QQK K:TMT10,s:Phosphorylated S TRPM4 135782 1 2 2606.1 76.95 HUMAN 1 -15.2988 -29.6349 RFRLTPPSPVRSEPQ-p Q8TAP8;S87-p RFRLTPPSPVRSEPQ 0.799181127526886 0.0535106882457202 -0.037 -0.227333333333333 1.87599949592588 16.9564658137572 -0.037 -0.227333333333333 0.649232198497873 0.0201536363820287 -0.481162696450844 -3.25159552753631 Q8TAP8 PPP1R35 Q8TAP8.S87.p_PPP1R35 Q8TAP8_S87s _1_1_87_87 Q8TAP8 Q8TAP8 Protein phosphatase 1 regulatory subunit 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28776.28776.3 7.96 7.96 2.278 3 1 1 0 1093.2681 3197.8008 S87s TMT10 83 (R) LTPPsPVRSEPQPAVPQELEMPVLK (S) LT(0.0)PPS(0.99)PVRS(0.0)EPQPAVPQELEMPVLK K:TMT10,s:Phosphorylated S PPP1R35 28123.8 6 3 2252.1 91.23 HUMAN 1 -1.876 -16.9565 RFSTYSQSPPDTPSL-p Q6ZS17-4;S367-p RFSTYSQSPPDTPSL 0.808269800911761 0.691343255394419 -0.048 -0.046 1.77512562759069 2.19837210249884 -0.043453415028546 -0.046 0.664488451090781 0.602785490189707 -0.458405310372326 -0.552231672111729 Q6ZS17 FAM65A Q6ZS17.4.S367.p_FAM65A Q6ZS17-4_S367s _1_1_367_367 Q6ZS17-4 Q6ZS17-4|A0A0A0MTL6|Q6ZS17-3|Q6ZS17-2 Isoform 4 of Rho family-interacting cell polarization regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22520.22520.4 17.63 10.47 2.842 8 1 1 0 825.8979 3220.6047 S367s TMT10 360 (K) RFSTYSQsPPDTPSLREQAFYNMLR (R) RFS(0.0)T(0.0)Y(0.0)S(0.0)QS(0.99)PPDT(0.0)PS(0.0)LREQAFY(0.0)NMLR s:Phosphorylated S RIPOR1 135393.6 8 5 1530.1 133.82 HUMAN 1 -1.7751 -2.1984 RFTEHNSSPNVSGSL-p Q9UJF2-2;S776-p RFTEHNSSPNVSGSL 0.814882670518065 0.186717066077068 -0.0456666666666667 -0.143 1.70601760866277 9.58672491548362 -0.0456666666666667 -0.143 0.675146839742227 0.109983492998245 -0.442666328156692 -1.90925462347194 Q9UJF2 RASAL2 Q9UJF2.2.S776.p_RASAL2 Q9UJF2-2_S775sS776s_2_2_775_776 Q9UJF2-2 Q9UJF2-2 Isoform 2 of Ras GTPase-activating protein nGAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19046.19046.3 11.08 11.08 3.06 7 2 2 0 898.7576 2534.3251 S775s S776s TMT10 770 (R) FTEHNssPNVSGSLSSGLQK (I) FT(0.0)EHNS(0.99)S(0.99)PNVS(0.0)GS(0.0)LS(0.0)S(0.0)GLQK K:TMT10,s:Phosphorylated S RASAL2 145265.6 2 44 281.2 388.28 HUMAN 1 -1.706 -9.5867 RFTYRSDSFENPVLQ-p P12956;S477-p RFTYRSDSFENPVLQ 0.594811993936193 0.0419290620796673 0.0926666666666667 -0.259666666666667 4.16223676198338 18.4610482065258 0.0926666666666667 -0.259666666666667 0.383509674296608 0.0142526355265189 0.948017020017128 -3.55317770970961 P12956 XRCC6 P12956.S477.p_XRCC6 P12956_S477s _1_1_477_477 P12956 P12956|P12956-2|B1AHC9 X-ray repair cross-complementing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17510.17510.3 14.9 14.9 1.214 2 1 1 0 671.652 1932.9765 S477s TMT10 475 (R) SDsFENPVLQQHFR (N) S(0.0)DS(0.99)FENPVLQQHFR s:Phosphorylated S XRCC6 70127.1 1 12 815.1 220.5 HUMAN 1 4.1622 -18.461 RFVNVVPTFGKKKGP-p E9PR30;T87-p RFVNVVPTFGKKKGP 0.203968533214827 0.596154440971765 -0.316666666666667 -0.0956666666666666 13.3766385807294 3.04173235172721 -0.316666666666667 -0.0956666666666666 0.0459553567563181 0.496394275873448 -2.57916186278361 -0.728772831103509 E9PR30 NotFound E9PR30.T87.p_NotFound E9PR30_T87t _1_1_87_87 E9PR30 E9PR30|P62861 40S ribosomal protein S30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.28300.28300.3 8.48 8.92 99 1 1 1 0 549.3076 1565.9456 T87t TMT10 81 (R) FVNVVPtFGK (K) FVNVVPT(1.0)FGK K:TMT10,t:Phosphorylated T FAU 10904.6 1 1 6959.1 8.48 HUMAN 1 -13.3766 -3.0417 RFVQKPYSRSSSMSS-p Q9Y5P4;S373-p RFVQKPYSRSSSMSS 0.95578545369103 0.440680627800933 0.0183333333333333 -0.099 0.384757086625423 4.73999052117344 0.0183333333333333 -0.099 0.915217448589643 0.335738347018115 0.11152853348863 -1.05598304612055 Q9Y5P4 COL4A3BP Q9Y5P4.S373.p_COL4A3BP Q9Y5P4_S373s _1_1_373_373 Q9Y5P4 Q9Y5P4-3 Collagen type IV alpha-3-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11972.11972.2 10.26 7.61 10.262 2 1 1 0 781.928 1482.8833 S373s TMT10 367 (R) FVQKPYsR (S) FVQKPY(0.0)S(0.99)R K:TMT10,s:Phosphorylated S COL4A3BP 71518.3 3 7 1173.1 170.04 HUMAN 1 0.3848 -4.74 RFWRGGQYENFRVQY-p E7ERS3;Y409-p RFWRGGQYENFRVQY 0.296020891667406 0.0420903342469211 0.173 0.374 9.95759638880273 18.4369384768096 0.173 0.374 0.100981161363573 0.0143319786428194 1.97434442177153 3.5482451545011 E7ERS3 ZC3H18 E7ERS3.Y409.p_ZC3H18 E7ERS3_Y409y _1_1_409_409 E7ERS3 E7ERS3|Q86VM9|Q86VM9-2 Zinc finger CCCH domain-containing protein 18 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8086.8122.2 11.1 1.22 99 1 1 1 0 640.2866 1199.6007 Y409y TMT10 406 (R) GGQyENFR (V) GGQY(1.0)ENFR y:Phosphorylated Y ZC3H18 109165.8 2 1 319.1 11.1 HUMAN 1 9.9576 18.4369 RFYMEKGTHRGLYKS-p B0YJ81;T103-p RFYMEKGTHRGLYKS 0.549577794384144 0.271096035571099 0.114333333333333 0.153 4.8004003252671 7.46543299632571 0.114333333333333 0.153 0.331100599785729 0.17924898302691 1.06735019647023 1.54180890257012 B0YJ81 HACD1 B0YJ81.T103.p_HACD1 B0YJ81_T103t _1_1_103_103 B0YJ81 B0YJ81|B0YJ81-2 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15388.15388.2 7.45 0.47 2.577 2 1 1 0 735.4052 1389.8367 T103t TMT10 102 (K) GtHRGLYK (S) GT(0.99)HRGLY(0.0)K K:TMT10,t:Phosphorylated T HACD1 32501.3 1 1 7148.1 7.45 HUMAN 1 4.8004 7.4654 RGAFSSVSMSGGAGR-p P19013;S34-p RGAFSSVSMSGGAGR 0.137689822550301 0.193875594812555 0.261 0.133 17.6289665862776 9.36814856889017 0.261 0.133 0.0172624860795505 0.115660520689083 3.3875607132276 1.87140865313866 P19013 NotFound P19013.S34.p_NotFound P19013_S34s _1_1_34_34 P19013 P19013 Keratin, type II cytoskeletal 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12846.12846.2 13.98 13.98 1.167 4 1 1 0 790.3596 1499.7474 S34s TMT10 28 (R) GAFSSVsMSGGAGR (C) GAFS(0.0)S(0.0)VS(0.99)MS(0.0)GGAGR s:Phosphorylated S KRT4 57683.6 4 46 69.99 672.47 HUMAN 1 17.629 9.3681 RGAGQQQSQEMMEVD-p Q15435;S12-p RGAGQQQSQEMMEVD 0.24454454723607 0.00711063487906239 0.188333333333333 0.762333333333333 11.7013306053429 30.771943711468 0.188333333333333 0.762333333333333 0.0675875866653618 0.000837154524652191 2.27946826421367 6.65955592077423 Q15435 PPP1R7 Q15435.S12.p_PPP1R7 Q15435_S12s _1_1_12_12 Q15435 Q15435|Q15435-3|B5MBZ8 Protein phosphatase 1 regulatory subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10157.10157.2 19.41 19.41 99 1 1 1 0 1001.9326 1922.8898 S12s TMT10 6 (R) GAGQQQsQEMMEVDR (R) GAGQQQS(1.0)QEMMEVDR s:Phosphorylated S PPP1R7 41677.6 3 1 1222.1 164.72 HUMAN 1 11.7013 30.7719 RGAIRLPSFKVKRKE-p Q9UPS6;S961-p RGAIRLPSFKVKRKE 0.191404434921086 0.411863321160939 0.433666666666667 0.108333333333333 14.0194314008933 5.12523415862553 0.433666666666667 0.108333333333333 0.0396329920267466 0.307239170660861 2.6964868256438 1.12672657098337 Q9UPS6 SETD1B Q9UPS6.S961.p_SETD1B Q9UPS6_S961s _1_1_961_961 Q9UPS6 Q9UPS6|Q9UPS6-2|A0A0A0MQV9|O15047 Histone-lysine N-methyltransferase SETD1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22118.22118.3 8.58 8.58 99 1 1 1 0 509.6334 1446.9197 S961s TMT10 955 (R) GAIRLPsFK (V) GAIRLPS(1.0)FK K:TMT10,s:Phosphorylated S SETD1B 213997.2 2 19 570.1 269.37 HUMAN 1 14.0194 5.1252 RGALVRGTPVRGAIT-p Q07666;T317-p RGALVRGTPVRGAIT 0.23797684518109 0.035891588053178 -0.183 -0.362333333333333 11.9270846222937 19.4521524473781 -0.183 -0.362333333333333 0.0641640159005054 0.0113444842175657 -2.31940808689772 -3.75895525468873 Q07666 KHDRBS1 Q07666.T317.p_KHDRBS1 Q07666_T317t _1_1_317_317 Q07666 Q07666|Q07666-2|Q07666-3 KH domain-containing, RNA-binding, signal transduction-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7294.7294.3 8.53 8.53 99 1 1 1 0 445.5887 1254.7844 T317t TMT10 311 (R) GALVRGtPVR (G) GALVRGT(1.0)PVR t:Phosphorylated T KHDRBS1 48340.6 2 7 1739.1 118.29 HUMAN 1 -11.9271 -19.4522 RGAPHRHSMPELGLR-p O43900;S437-p RGAPHRHSMPELGLR 0.934949798273509 0.175128878451831 0.0136666666666667 -0.164666666666667 0.574718082838358 9.94957176791939 0.0136666666666667 -0.164666666666667 0.876048583452184 0.101167920503969 0.163512413880262 -1.97215766282959 O43900 PRICKLE3 O43900.S437.p_PRICKLE3 O43900_S437s _1_1_437_437 O43900 O43900|H0Y413|O43900-2 Prickle planar cell polarity protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7503.7503.4 12.72 9.65 99 1 1 1 0 467.4902 1786.9696 S437s TMT10 431 (R) GAPHRHsMPELGLR (S) GAPHRHS(1.0)MPELGLR s:Phosphorylated S PRICKLE3 70833 5 2 3620.1 46.82 HUMAN 1 0.5747 -9.9496 RGAPVNISSSDLTGR-p P48730-2;S382-p RGAPVNISSSDLTGR 0.574315878418945 0.387592767754703 0.108666666666667 -0.107666666666667 4.43323167415265 5.47143575684568 0.108666666666667 -0.107666666666667 0.360310428875463 0.283698098101033 0.999088050310217 -1.18953260708931 P48730 CSNK1D P48730.2.S382.p_CSNK1D P48730-2_S382s _1_1_382_382 P48730-2 H7BYT1|P48730|P48730-2 Isoform 2 of Casein kinase I isoform delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16574.16574.3 12.14 12.14 1.125 4 1 1 0 561.6161 1602.8649 S382s TMT10 376 (R) GAPVNIsSSDLTGR (Q) GAPVNIS(0.99)S(0.0)S(0.0)DLT(0.0)GR s:Phosphorylated S CSNK1D 47116.9 5 11 1498.1 136.39 HUMAN 1 4.4332 -5.4714 RGARRRLTPEQKKRS-p Q8TF72;T1012-p RGARRRLTPEQKKRS 0.889704895171331 0.0966845956479877 0.0206666666666667 -0.204333333333333 0.990650777303111 13.4172385385264 0.0206666666666667 -0.204333333333333 0.796040057255907 0.0455277456305706 0.271531626429378 -2.58505684260964 Q8TF72 SHROOM3 Q8TF72.T1012.p_SHROOM3 Q8TF72_T1012t _1_1_1012_1012 Q8TF72 Q8TF72 Protein Shroom3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4222.4222.3 7.82 7.82 99 1 1 1 0 513.3013 1457.9204 T1012t Hydrogen 1010 (R) RLtPEQKK (R) RLT(1.0)PEQKK K:TMT10-Lys-Only,t:Phosphorylated T SHROOM3 218451.1 4 43 90.2 622.62 HUMAN 1 0.9907 -13.4172 RGCGLQESEPEDFLK-p Q8TEY5;S63-p RGCGLQESEPEDFLK 0.495901315517715 0.0426543700628393 0.116666666666667 0.266 5.60867671526317 18.3547788189178 0.116666666666667 0.266 0.274873155734692 0.0146056913261909 1.2145246830441 3.53146168126029 Q8TEY5 CREB3L4 Q8TEY5.S63.p_CREB3L4 Q8TEY5_S63s _1_1_63_63 Q8TEY5 Q8TEY5|Q5T4K9 Cyclic AMP-responsive element-binding protein 3-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22661.22661.3 15.72 15.72 99 1 1 1 0 716.3403 2067.0469 S63s TMT10 57 (R) GCGLQEsEPEDFLK (L) GCGLQES(1.0)EPEDFLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CREB3L4 43945 3 1 2946.1 65.12 HUMAN 1 5.6087 18.3548 RGDCSTNSPVGVSKV-p Q96L73;S948-p RGDCSTNSPVGVSKV 0.909874857971449 0.0190570547915817 0.0196666666666667 -0.345 0.804924561315232 23.6536614277951 0.0196666666666667 -0.345 0.830821150271532 0.00431155427236096 0.224203602630848 -4.70521017808318 Q96L73 NSD1 Q96L73.S948.p_NSD1 Q96L73_S948s _1_1_948_948 Q96L73 Q96L73|Q96L73-3|Q96L73-2 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7199.7199.3 16.89 11.04 3.572 5 1 1 0 748.3688 2163.1228 S948s TMT10 938 (R) SPGRGDCSTNsPVGVSK (V) S(0.0)PGRGDCS(0.0)T(0.0)NS(0.99)PVGVS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NSD1 302295.2 1 8 601.1 263.26 HUMAN 1 0.8049 -23.6537 RGDPPRLSPDPVAGS-p Q9BUR4;S54-p RGDPPRLSPDPVAGS 0.237899467377921 0.0372582401182819 0.182 0.378666666666667 11.945674845396 19.2040088169102 0.182 0.378666666666667 0.0638899451754787 0.0120115517938756 2.32270252002766 3.70687230703322 Q9BUR4 WRAP53 Q9BUR4.S54.p_WRAP53 Q9BUR4_S54s _1_1_54_54 Q9BUR4 Q9BUR4|E9PMG4|E9PMR3 Telomerase Cajal body protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20534.20534.5 20.67 19.63 6.246 4 1 1 0 778.9852 3810.9282 S54s TMT10 35 (K) NADSELMPPPPERGDPPRLsPDPVAGSAVSQELR (E) NADS(0.0)ELMPPPPERGDPPRLS(0.99)PDPVAGS(0.0)AVS(0.0)QELR s:Phosphorylated S WRAP53 60164.1 7 2 1145.1 172.91 HUMAN 1 11.9457 19.204 RGDSEEASGAEEEVG-p E7EW59;S669-p RGDSEEASGAEEEVG 0.291769074233042 0.0505547637700606 -0.193 0.241666666666667 10.0912102254733 17.3180056586329 -0.193 0.241666666666667 0.0979217074139785 0.018543829866799 -1.99756134849832 3.32294207168108 E7EW59 SALL2 E7EW59.S669.p_SALL2 E7EW59_S669s _1_1_669_669 E7EW59 Q9Y467|E7EW59 Sal-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21981.21981.5 21.23 21.23 3.985 5 1 1 0 655.1292 3191.6432 S669s TMT10 658 (K) AISVRGDSEEAsGAEEEVGTVAAAATAGK (E) AIS(0.0)VRGDS(0.0)EEAS(0.99)GAEEEVGT(0.0)VAAAAT(0.0)AGK K:TMT10,s:Phosphorylated S SALL2 96608.7 6 2 179.2 480.48 HUMAN 1 -10.0912 17.318 RGDSQECSPRSCPEL-p Q13111;S203-p RGDSQECSPRSCPEL 0.0626849711829956 0.0123496888209154 0.468333333333333 -0.657 26.1425247957904 26.6404752918146 0.468333333333333 -0.657 0.00243079044430491 0.00216746688429656 5.33908579146342 -5.46421087189196 Q13111 CHAF1A Q13111.S203.p_CHAF1A Q13111_S203s _1_1_203_203 Q13111 Q13111|Q13111-3|Q13111-2 Chromatin assembly factor 1 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3380.3380.3 10.35 10.35 10.353 2 1 1 0 500.8871 1420.68 S203s TMT10 196 (R) RGDSQECsPR (S) RGDS(0.0)QECS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S CHAF1A 108122.1 1 6 633.1 256.49 HUMAN 1 26.1425 -26.6405 RGDSVSDSGSDALRS-p Q53EL6;S80-p RGDSVSDSGSDALRS 0.450620194622711 0.210212972618213 0.106666666666667 0.166333333333333 6.39162366581557 8.91009765076145 0.106666666666667 0.166333333333333 0.229529036383847 0.128525776070238 1.35404089968116 1.79216266915622 Q53EL6 PDCD4 Q53EL6.S80.p_PDCD4 Q53EL6_S80s _1_1_80_80 Q53EL6 Q53EL6|Q53EL6-2 Programmed cell death protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14864.14864.4 15.2 12.59 1.275 9 1 1 0 797.3951 3106.6017 S80s TMT10 70 (R) DSGRGDSVSDsGSDALRSGLTVPTSPK (G) DS(0.0)GRGDS(0.0)VS(0.0)DS(0.99)GS(0.0)DALRS(0.0)GLT(0.0)VPT(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S PDCD4 52133.7 3 6 476.1 301.17 HUMAN 1 6.3916 8.9101 RGDTVSASPCSAPLA-p Q15477;S245-p RGDTVSASPCSAPLA 0.777448579667312 0.858740289582643 -0.058 0.0213333333333334 2.09966112028391 0.932017033079133 -0.058 0.0213333333333334 0.616643116608579 0.80686020584268 -0.530761314090123 0.256712533377172 Q15477 SKIV2L Q15477.S245.p_SKIV2L Q15477_S245s _1_1_245_245 Q15477 Q15477 Helicase SKI2W HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11539.11539.2 16.64 16.64 1.588 4 1 1 0 899.4237 1717.8741 S245s TMT10 239 (R) GDTVSAsPCSAPLAR (A) GDT(0.0)VS(0.0)AS(0.99)PCS(0.0)APLAR C:Carbamidomethylation,s:Phosphorylated S SKIV2L 138722.7 4 1 2186.1 94.08 HUMAN 1 -2.0997 0.932 RGDYDRFYGRDYEYN-p Q1KMD3;Y702-p RGDYDRFYGRDYEYN 0.578850059128565 0.139987435491688 0.0783333333333333 0.173666666666667 4.36619806619568 11.2530437025307 0.0783333333333333 0.173666666666667 0.365914983519831 0.0749368838790455 0.986512858617009 2.19948311109399 Q1KMD3 HNRNPUL2 Q1KMD3.Y702.p_HNRNPUL2 Q1KMD3_Y702y _1_1_702_702 Q1KMD3 Q1KMD3|H3BQZ7 Heterogeneous nuclear ribonucleoprotein U-like protein 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11329.11329.4 10.83 5.81 1.259 5 1 1 0 655.0419 2537.1796 Y702y TMT10 694 (R) YRGDYDRFyGRDYEYNR (Y) Y(0.0)RGDY(0.0)DRFY(0.99)GRDY(0.0)EY(0.0)NR y:Phosphorylated Y HNRNPUL2 85673.7 1 2 70.1 34.32 HUMAN 1 4.3662 11.253 RGEAGTGTPVKGRTG-p O14841;T151-p RGEAGTGTPVKGRTG 0.125105447257903 0.561885993764206 0.454666666666667 0.066 18.7748475049482 3.37327291306388 0.454666666666667 0.066 0.0132591367412566 0.459909847490716 3.62081261870642 0.795140191674971 O14841 OPLAH O14841.T151.p_OPLAH O14841_T151t _1_1_151_151 O14841 O14841 5-oxoprolinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8908.8908.3 11.85 6.21 1.618 2 1 1 0 687.0547 1979.1802 T151t TMT10 140 (R) VVLHRGEAGTGtPVK (G) VVLHRGEAGT(0.0)GT(0.99)PVK K:TMT10,t:Phosphorylated T OPLAH 138824 8 1 1942.1 106.03 HUMAN 1 18.7748 3.3733 RGEDAGMSSEDDGLP-p Q6NV74;S154-p RGEDAGMSSEDDGLP 0.76154028601362 0.312467152506031 0.06 0.112333333333333 2.26512883452503 6.67711023512578 0.06 0.112333333333333 0.593590738915077 0.214926010096953 0.566747851564487 1.40399593696978 Q6NV74 KIAA1211L Q6NV74.S154.p_KIAA1211L Q6NV74_S154sS155s_2_2_154_155 Q6NV74 Q6NV74 Uncharacterized protein KIAA1211-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7642.7642.3 7.92 7.92 99 2 2 2 0 699.6141 1920.8919 M153m S154s S155s TMT10 147 (K) RGEDAGmssEDDGLPR (S) RGEDAGM(1.0)S(1.0)S(1.0)EDDGLPR m:Oxidized methionine,s:Phosphorylated S KIAA1211L 102725.9 1 11 756.1 230.87 HUMAN 1 2.2651 6.6771 RGEDHPPS_______-p Q9BTT4;S135-p RGEDHPPS_______ 0.344754219057617 0.0172203605445103 0.182 0.405333333333333 8.59023123898458 24.3364585346632 0.182 0.405333333333333 0.138349271329546 0.00368429287774471 1.73742947486593 4.87179016025974 Q9BTT4 MED10 Q9BTT4.S135.p_MED10 Q9BTT4_S135s _1_1_135_135 Q9BTT4 Q9BTT4 Mediator of RNA polymerase II transcription subunit 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4813.4813.3 13.33 8.88 12.151 2 1 1 0 468.5555 1323.6854 S135s TMT10 126 (R) SIRGEDHPPs (-) S(0.0)IRGEDHPPS(0.99) s:Phosphorylated S MED10 15801.8 2 1 6190.1 13.33 HUMAN 1 8.5902 24.3365 RGELIPISPSTEVGG-p P10244;S393-p RGELIPISPSTEVGG 0.771638354290043 0.00328132424303653 -0.0416666666666667 -0.613666666666667 2.15666000647609 37.187682224708 -0.0416666666666667 -0.613666666666667 0.608602874645169 0.000191087279537871 -0.543222650696255 -8.93557825772313 P10244 MYBL2 P10244.S393.p_MYBL2 P10244_S393s _1_1_393_393 P10244 P10244|P10244-2 Myb-related protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25464.25464.3 13.2 13.2 3.923 6 1 1 0 953.1814 2777.561 S393s Hydrogen 387 (R) GELIPIsPSTEVGGSGIGTPPSVLKR (Q) GELIPIS(0.99)PS(0.0)T(0.0)EVGGS(0.0)GIGT(0.0)PPS(0.0)VLKR K:TMT10-Lys-Only,s:Phosphorylated S MYBL2 79390.3 6 4 752.1 231.53 HUMAN 1 -2.1567 -37.1877 RGELQCRSPPRLHGA-p Q9BXI6;S383-p RGELQCRSPPRLHGA 0.383617908533383 0.444625036484755 0.123 -0.107 7.70239168973621 4.68679912866917 0.123 -0.107 0.169730867541455 0.33987567814524 1.58348699949951 -1.04613624924538 Q9BXI6 TBC1D10A Q9BXI6.S383.p_TBC1D10A Q9BXI6_S383s _1_1_383_383 Q9BXI6 Q9BXI6-2|B5MD46 TBC1 domain family member 10A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3735.3737.3 14.05 10.56 99 1 1 1 0 424.5658 1191.716 S383s Hydrogen 383 (R) sPPRLHGAK (A) S(1.0)PPRLHGAK K:TMT10-Lys-Only,s:Phosphorylated S TBC1D10A 57630.1 8 5 1460.1 140.31 HUMAN 1 7.7024 -4.6868 RGEPEGGSQDQKGQA-p Q14676;S955-p RGEPEGGSQDQKGQA 0.241066654274537 0.00921430324405043 -0.313 0.89 11.8095522013849 28.7682070502026 -0.313 0.89 0.0659241865800706 0.00132794257497801 -2.29859934336258 6.05684271095621 Q14676 MDC1 Q14676.S955.p_MDC1 Q14676_S955s _1_1_955_955 Q14676 Q14676|Q14676-3 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3441.3441.3 12.62 11.57 8.73 2 1 1 0 647.6233 1860.8885 S955s Hydrogen 945 (R) DTQRGEPEGGsQDQK (G) DT(0.0)QRGEPEGGS(0.99)QDQK K:TMT10-Lys-Only,s:Phosphorylated S MDC1 227803.2 4 23 6.1 1662.62 HUMAN 1 -11.8096 28.7682 RGEPNVSYICSRYYR-p P49840;Y279-p RGEPNVSYICSRYYR 0.532600177749201 0.962290182291263 0.123333333333333 -0.00633333333333329 5.06248871779106 0.238071921660642 0.123333333333333 -0.00633333333333331 0.311710282125604 0.946657342715562 1.11549726738695 -0.0700600015534277 P49840 GSK3A P49840.Y279.p_GSK3A P49840_Y279y_1_1_279_279 P49840 P49840|P49841-2|A8MT37 Glycogen synthase kinase-3 alpha GG20160819_MSz_CCLE_T4D7_pY_Injection_02.19227.19585.2 26.53 19.65 2.435 3 1 1 0 920.9251 1777.9014 Q269q Y279y Hydrogen 269 (K) qLVRGEPNVSyICSR (Y) Q(1.0)LVRGEPNVS(0.0)Y(0.99)ICS(0.0)R C:Carbamidomethylation,q:Pyroglutamic acid,y:Phosphorylated Y GSK3A 51436.3 32 2 46.1 47.13 HUMAN 1 5.0625 -0.2381 RGFEGKLTAQGKLLG-p Q86VW2-3;T389-p RGFEGKLTAQGKLLG 0.766186662098155 0.232358066884507 0.0416666666666667 -0.185666666666667 2.21904496263666 8.3482565858817 0.0416666666666667 -0.185666666666667 0.599922988103336 0.146276426275059 0.556782659984563 -1.6949643312147 Q86VW2 ARHGEF25 Q86VW2.3.T389.p_ARHGEF25 Q86VW2-3_T389tT399tT403t_3_3_389_403 Q86VW2-3 Q86VW2-3|Q86VW2-2 Isoform 3 of Rho guanine nucleotide exchange factor 25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29486.29486.3 7.8 2.37 6.963 5 3 3 0 1115.1992 3103.6625 T389t T399t T403t Hydrogen 388 (K) LtAQGKLLGQDtFWVtEPEAGGLLSSR (G) LT(0.99)AQGKLLGQDT(0.99)FWVT(0.99)EPEAGGLLS(0.0)S(0.0)R K:TMT10-Lys-Only,t:Phosphorylated T ARHGEF25 68683.5 1 2 5110.1 22.88 HUMAN 1 2.219 -8.3483 RGFGQSNSLPTAGSV-p Q9UPU9;S580-p RGFGQSNSLPTAGSV 0.401693583716226 0.579662109958999 0.140333333333333 -0.0586666666666666 7.31180961616664 3.19559672688506 0.140333333333333 -0.0586666666666667 0.185703050727666 0.479115617208193 1.51549098513218 -0.759757067058362 Q9UPU9 SAMD4A Q9UPU9.S580.p_SAMD4A Q9UPU9_S580s _1_1_580_580 Q9UPU9 Q9UPU9|Q9UPU9-3|Q9UPU9-2|G3V2R1 Protein Smaug homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17209.17209.3 15.08 15.08 2.585 4 1 1 0 716.0039 2066.0287 S580s TMT10 574 (R) GFGQSNsLPTAGSVGGGMGR (R) GFGQS(0.0)NS(0.99)LPT(0.0)AGS(0.0)VGGGMGR s:Phosphorylated S SAMD4A 80097.9 3 8 2441.1 83.32 HUMAN 1 7.3118 -3.1956 RGFPLGLSAKSGGGP-p Q9P270;S72-p RGFPLGLSAKSGGGP 0.263920652188996 0.199167205736452 -0.196333333333333 -0.171333333333333 10.9739097117096 9.22152748954524 -0.196333333333333 -0.171333333333333 0.0799114532717575 0.119631969077334 -2.15153916312404 -1.84603529448156 Q9P270 SLAIN2 Q9P270.S72.p_SLAIN2 Q9P270_S72s _1_1_72_72 Q9P270 Q9P270 SLAIN motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24860.24860.2 10.53 10.53 99 1 1 1 0 714.4082 1347.84 S72s TMT10 66 (R) GFPLGLsAK (S) GFPLGLS(1.0)AK K:TMT10,s:Phosphorylated S SLAIN2 62770.5 1 4 277.1 389.63 HUMAN 1 -10.9739 -9.2215 RGFSRKESLLQIAEN-p Q5VTJ3;S365-p RGFSRKESLLQIAEN 0.291864377986462 0.369199534880102 0.154666666666667 0.0893333333333334 10.0862766946403 5.7402491073122 0.154666666666667 0.0893333333333334 0.0980330084515114 0.266670570035334 1.9967037423919 1.23786694702208 Q5VTJ3 KLHDC7A Q5VTJ3.S365.p_KLHDC7A Q5VTJ3_S365s _1_1_365_365 Q5VTJ3 Q5VTJ3 Kelch domain-containing protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33623.33623.5 29.59 29.59 99 1 1 1 0 926.692 4549.4641 S365s TMT10 363 (R) KEsLLQIAENPELQLQPDGFRLPAPPCPDPGALPGLGR (S) KES(1.0)LLQIAENPELQLQPDGFRLPAPPCPDPGALPGLGR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S KLHDC7A 85847.2 11 3 2398.1 85.23 HUMAN 1 10.0863 5.7402 RGGLRPGSLDAEIDL-p Q15654;S92-p RGGLRPGSLDAEIDL 0.222327324136616 0.270315296286626 -0.240333333333333 -0.355 12.5652650131347 7.4809663088897 -0.240333333333333 -0.355 0.0553953739802826 0.178609012407623 -2.43301709500653 -1.54451200320248 Q15654 TRIP6 Q15654.S92.p_TRIP6 Q15654_S92s _1_1_92_92 Q15654 Q15654 Thyroid receptor-interacting protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37331.37331.3 28 22.59 12.938 4 1 1 0 897.7791 2611.3686 S92s Hydrogen 86 (R) GGLRPGsLDAEIDLLSSTLAELNGGR (G) GGLRPGS(0.99)LDAEIDLLS(0.0)S(0.0)T(0.0)LAELNGGR s:Phosphorylated S TRIP6 51770.4 3 1 2633.1 75.83 HUMAN 1 -12.5653 -7.481 RGGPGDGSPVVLPNS-p A7MBM2;S1373-p RGGPGDGSPVVLPNS 0.185461409283341 0.985813678326324 0.229666666666667 -0.00199999999999998 14.3848301779676 0.0923401627845544 0.229666666666667 -0.00199999999999999 0.0364348496897575 0.978962336852251 2.76385194729757 -0.0276081815660169 A7MBM2 DISP2 A7MBM2.S1373.p_DISP2 A7MBM2_S1373s _1_1_1373_1373 A7MBM2 A7MBM2 Protein dispatched homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30453.30453.3 17.16 17.16 7.986 2 1 1 0 927.7991 2701.4147 S1373s TMT10 1367 (R) GGPGDGsPVVLPNSQPDLPDVWLR (R) GGPGDGS(0.99)PVVLPNS(0.0)QPDLPDVWLR s:Phosphorylated S DISP2 154339.7 4 3 2793.1 70.42 HUMAN 1 14.3848 -0.0923 RGGPGKLSPRKGVSQ-p Q12888-2;S1367-p RGGPGKLSPRKGVSQ 0.53433256799454 0.742197460218764 0.089 -0.0356666666666666 5.04119268079735 1.78442911407799 0.089 -0.0356666666666666 0.313242536417271 0.66306650292344 1.11160156328859 -0.460463386456257 Q12888 TP53BP1 Q12888.2.S1367.p_TP53BP1 Q12888-2_S1367s _1_1_1367_1367 Q12888-2 Q12888-2|Q12888-3 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6489.6683.2 9.14 4.04 99 1 1 1 0 703.8991 1326.8258 S1367s TMT10 1361 (R) GGPGKLsPR (K) GGPGKLS(1.0)PR K:TMT10,s:Phosphorylated S TP53BP1 216167.2 16 57 3.1 2297.07 HUMAN 1 5.0412 -1.7844 RGGPVSRSPGAPSAG-p Q5SYE7-2;S1163-p RGGPVSRSPGAPSAG 0.703545989174049 0.0113828855454801 -0.068 -0.449 2.87080687094107 27.209059602081 -0.068 -0.449 0.51632043375499 0.00190148997376325 -0.694047298317688 -5.61808003195892 Q5SYE7 NHSL1 Q5SYE7.2.S1163.p_NHSL1 Q5SYE7-2_S1163s _1_1_1163_1163 Q5SYE7-2 Q5SYE7|Q5SYE7-2 Isoform 2 of NHS-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10007.10007.4 19.85 13.09 1.112 10 1 1 0 892.9365 3488.7567 S1163s TMT10 1157 (R) GGPVSRsPGAPSAGEAEARPSPSTTPLPDSSPSR (K) GGPVS(0.0)RS(0.99)PGAPS(0.0)AGEAEARPS(0.0)PS(0.0)T(0.0)T(0.0)PLPDS(0.0)S(0.0)PS(0.0)R s:Phosphorylated S NHSL1 171957.1 1 11 747.1 232.6 HUMAN 1 -2.8708 -27.2091 RGGRRRRSADSVMAE-p P11413-3;S26-p RGGRRRRSADSVMAE 0.769192567611738 0.44378231619079 -0.042 0.095 2.18434080900776 4.69834977545189 -0.042 0.095 0.604736133851068 0.338972934011642 -0.549249396776225 1.0482762377383 P11413 G6PD P11413.3.S26.p_G6PD P11413-3_S26s _1_1_26_26 P11413-3 P11413-3 Isoform 3 of Glucose-6-phosphate 1-dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18341.18341.3 18.84 18.84 1.285 3 1 1 0 591.621 1692.8788 S26s TMT10 26 (R) sADSVMAEQVALSR (T) S(0.99)ADS(0.0)VMAEQVALS(0.0)R s:Phosphorylated S G6PD 62980.7 1 2 4695.1 27.84 HUMAN 1 -2.1843 4.6983 RGGSGRISALQGKLS-p Q14966;S1472-p RGGSGRISALQGKLS 0.666837662699998 0.063844784726725 0.128333333333333 -0.223333333333333 3.28885892748037 15.9081301338493 0.128333333333333 -0.223333333333333 0.468936575133545 0.0256558841949834 0.778496237865714 -3.04843141431877 Q14966 ZNF638 Q14966.S1472.p_ZNF638 Q14966_S1472s _1_1_1472_1472 Q14966 Q14966|Q14966-3|Q14966-5 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10475.10475.3 7.15 7.15 1.65 2 1 1 0 556.979 1588.9535 S1472s TMT10 1466 (R) GGSGRIsALQGK (L) GGS(0.0)GRIS(0.99)ALQGK K:TMT10,s:Phosphorylated S ZNF638 222047.2 1 19 165.1 494.68 HUMAN 1 3.2889 -15.9081 RGGSGYHSRSPARQE-p Q9UQ35;S1822-p RGGSGYHSRSPARQE 0.325611631944441 0.0142923642473555 0.156666666666667 0.364 9.12354162090143 25.5789856902003 0.156666666666667 0.364 0.122361794610946 0.00276758794968352 1.82975075424114 5.18525850163231 Q9UQ35 SRRM2 Q9UQ35.S1822.p_SRRM2 Q9UQ35_S1822sS1824s_2_2_1822_1824 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3546.3546.4 10.93 10.93 2.733 6 2 2 0 552.7441 2048.0219 S1822s S1824s TMT10 1816 (R) GGSGYHsRsPARQESSR (T) GGS(0.0)GY(0.0)HS(0.99)RS(0.99)PARQES(0.0)S(0.0)R s:Phosphorylated S SRRM2 300351.7 9 226 2.1 3310.34 HUMAN 1 9.1235 25.579 RGGSSDLSDEDEDAE-p Q04721;S1845-p RGGSSDLSDEDEDAE 0.948754976233882 0.418593254762966 -0.012 0.089 0.452671585240688 5.03301304815305 -0.012 0.089 0.901016701950427 0.313833062746621 -0.130325609685727 1.10987892513819 Q04721 NOTCH2 Q04721.S1845.p_NOTCH2 Q04721_S1845s _1_1_1845_1845 Q04721 Q04721 Neurogenic locus notch homolog protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36595.36595.3 27.79 27.79 2.577 9 1 1 0 1394.6167 4101.8694 S1845s TMT10 1839 (R) GGSSDLsDEDEDAEDSSANIITDLVYQGASLQAQTDR (T) GGS(0.0)S(0.0)DLS(0.99)DEDEDAEDS(0.0)S(0.0)ANIIT(0.0)DLVY(0.0)QGAS(0.0)LQAQT(0.0)DR s:Phosphorylated S NOTCH2 279264.6 9 4 1083.1 179.88 HUMAN 1 -0.4527 5.033 RGGVKKVSGVGGTTY-p Q9C0B5;S704-p RGGVKKVSGVGGTTY 0.769192567611738 0.0272626558045556 0.0513333333333333 -0.359 2.18475868799687 21.2215001340708 0.0513333333333333 -0.359 0.604677948822827 0.00754831449780301 0.549340255265726 -4.14195883714357 Q9C0B5 ZDHHC5 Q9C0B5.S704.p_ZDHHC5 Q9C0B5_S704s _1_1_704_704 Q9C0B5 Q9ULC8|Q9C0B5|Q9ULC8-2|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21148.21148.3 7.7 7.7 1.152 5 1 1 0 645.6811 1855.0577 S704s TMT10 702 (K) KVsGVGGTTYEISV (-) KVS(0.99)GVGGT(0.0)T(0.0)Y(0.0)EIS(0.0)V K:TMT10,s:Phosphorylated S ZDHHC5 78285 3 24 134.1 530.74 HUMAN 1 2.1848 -21.2215 RGGVKRISGLIYEET-p P62805;S48-p RGGVKRISGLIYEET 0.0948633510902073 0.340600059053993 -0.315 0.189 21.7270003696589 6.196288499596 -0.315 0.189 0.00671892762586736 0.24008838487896 -4.25977889751961 1.31913288215884 P62805 HIST1H4I P62805.S48.p_HIST1H4I P62805_S48s _1_1_48_48 P62805 P62805 Histone H4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24144.24144.4 15.33 15.33 9.149 3 1 1 0 568.8262 2192.3167 S48s TMT10 46 (K) RIsGLIYEETRGVLK (V) RIS(0.99)GLIY(0.0)EET(0.0)RGVLK K:TMT10,s:Phosphorylated S HIST1H4A 11367.1 6 1 4732.1 27.3 HUMAN 1 -21.727 6.1963 RGGYRNFYDRYRGDY-p Q1KMD3;Y691-p RGGYRNFYDRYRGDY 0.809924688163494 0.297808443916201 0.122666666666667 0.144333333333333 1.76009223368864 6.94397987269707 0.122666666666667 0.144333333333333 0.666792607994121 0.202116613399867 0.454991970680595 1.45080596745659 Q1KMD3 HNRNPUL2 Q1KMD3.Y691.p_HNRNPUL2 Q1KMD3_Y691y _1_1_691_691 Q1KMD3 Q1KMD3|H3BQZ7 Heterogeneous nuclear ribonucleoprotein U-like protein 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.9343.9343.2 7.57 2.27 5.288 2 1 1 0 671.8098 1262.6479 Y691y TMT10 689 (R) NFyDRYR (G) NFY(0.99)DRY(0.0)R y:Phosphorylated Y HNRNPUL2 85673.7 1 1 70.1 34.32 HUMAN 1 1.7601 6.944 RGHDEGSSLEEPLIE-p B4DWF2;S85-p RGHDEGSSLEEPLIE 0.848604997500027 0.370544372074828 -0.031 0.174 1.37781882838986 5.71895683054514 -0.031 0.174 0.728145411609159 0.267981193471071 -0.366137950147571 1.23405103697604 B4DWF2 IKZF2 B4DWF2.S85.p_IKZF2 B4DWF2_S84sS85s_2_2_84_85 B4DWF2 B4DWF2|Q9UKS7 Zinc finger protein Helios HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16865.16865.4 8.73 8.73 8.733 4 2 2 0 883.1449 3369.6244 S84s S85s Hydrogen 74 (R) EDEIRGHDEGssLEEPLIESSEVADNRK (V) EDEIRGHDEGS(0.99)S(0.99)LEEPLIES(0.0)S(0.0)EVADNRK K:TMT10-Lys-Only,s:Phosphorylated S IKZF2 61457.9 1 5 2223.2 92.84 HUMAN 1 -1.3778 5.719 RGHNSSNSPSLQAGG-p Q8IWZ3-6;S2598-p RGHNSSNSPSLQAGG 0.455145758341492 0.132581781155776 0.164 0.477333333333333 6.30520973840746 11.5657349718419 0.164 0.477333333333333 0.234141839585459 0.0697310978503767 1.33875730603551 2.25445898964292 Q8IWZ3 ANKHD1 Q8IWZ3.6.S2598.p_ANKHD1 Q8IWZ3-6_S2598s _1_1_2598_2598 Q8IWZ3-6 Q8IWZ3-6|H7C0V5 Isoform 6 of Ankyrin repeat and KH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4974.4974.3 15.77 15.77 1.121 4 1 1 0 760.0059 2198.0384 S2598s TMT10 2592 (R) GHNSSNsPSLQAGGAEGAGDR (G) GHNS(0.0)S(0.0)NS(0.99)PS(0.0)LQAGGAEGAGDR s:Phosphorylated S ANKHD1 279224.1 2 42 287.1 383.69 HUMAN 1 6.3052 11.5657 RGHQVHKSWPLSISD-p Q92619;S619-p RGHQVHKSWPLSISD 0.200149573252671 0.30618225700787 -0.211666666666667 -0.0996666666666667 13.5943314040768 6.79091681658558 -0.211666666666667 -0.100816377808873 0.043708596323188 0.209367042527625 -2.61873404222528 -1.42398065085305 Q92619 HMHA1 Q92619.S619.p_HMHA1 Q92619_S619s _1_1_619_619 Q92619 K7EM85|Q92619-2|K7ES98 Rho GTPase-activating protein 45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30009.30009.3 15.2 15.2 2.482 5 1 1 0 948.4569 2763.3878 S619s TMT10 619 (K) sWPLSISDSDSGLDPGPGAGDFK (K) S(0.99)WPLS(0.0)IS(0.0)DS(0.0)DS(0.0)GLDPGPGAGDFK K:TMT10,s:Phosphorylated S ARHGAP45 125924.3 1 6 1815.1 113.01 HUMAN 1 -13.5943 -6.7909 RGHRKTASFGNILDV-p O43318;S417-p RGHRKTASFGNILDV 0.269034721726384 0.96641286487235 0.166 -0.00599999999999999 10.8122198670636 0.211179423691065 0.166 -0.00599999999999997 0.0829426703258479 0.952537446070862 2.12324335100157 -0.0623245151756904 O43318 MAP3K7 O43318.S417.p_MAP3K7 O43318_S417s _1_1_417_417 O43318 O43318|O43318-3 Mitogen-activated protein kinase kinase kinase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37011.37011.2 19.28 15.84 3.604 3 1 1 0 1297.163 2513.3561 S417s TMT10 415 (K) TAsFGNILDVPEIVISGNGQPR (R) T(0.0)AS(0.99)FGNILDVPEIVIS(0.0)GNGQPR s:Phosphorylated S MAP3K7 67936.6 14 6 1139.1 173.29 HUMAN 1 10.8122 -0.2112 RGHSRSRSPQWRRSR-p Q9UQ35;S510-p RGHSRSRSPQWRRSR 0.312188754380891 0.0262377057275732 0.200333333333333 0.315333333333333 9.45905982746726 21.4914579564498 0.200333333333333 0.315333333333333 0.113264553488973 0.00709339597805589 1.8878634371577 4.2022854958902 Q9UQ35 SRRM2 Q9UQ35.S510.p_SRRM2 Q9UQ35_S510s _1_1_510_510 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4323.4323.3 11.35 11.35 1.354 2 1 1 0 409.2057 1145.6377 S510s TMT10 508 (R) SRsPQWR (R) S(0.0)RS(0.99)PQWR s:Phosphorylated S SRRM2 300351.7 2 18 2.1 3310.34 HUMAN 1 9.4591 21.4915 RGHTASESDEQQWPE-p Q9NTI5;S1259-p RGHTASESDEQQWPE 0.0224122716392434 0.00880962755437148 -0.769666666666667 -0.760333333333333 38.193704425297 29.1293371827897 -0.769666666666667 -0.760333333333333 0.000151575691246559 0.00122198614460735 -9.36823445342861 -6.16213843427058 Q9NTI5 PDS5B Q9NTI5.S1259.p_PDS5B Q9NTI5_S1257sS1259s_2_2_1257_1259 Q9NTI5 Q9NTI5|Q9NTI5-2|Q9NTI5-5 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10239.10239.2 14.51 14.51 2.217 3 2 2 0 1123.9461 2086.9515 S1257s S1259s Hydrogen 1253 (R) GHTAsEsDEQQWPEEK (R) GHT(0.0)AS(0.99)ES(0.99)DEQQWPEEK K:TMT10-Lys-Only,s:Phosphorylated S PDS5B 165919.5 6 21 100.1 597.99 HUMAN 1 -38.1937 -29.1293 RGILDVQSVQEKRKK-p Q8NHG7;S46-p RGILDVQSVQEKRKK 0.372032422758504 0.32029773994645 0.175333333333333 -0.123333333333333 7.96529427582421 6.53914960610284 0.175333333333333 -0.123333333333333 0.159760927216535 0.221863080832491 1.62913949803713 -1.37972090765497 Q8NHG7 SVIP Q8NHG7.S46.p_SVIP Q8NHG7_S46s _1_1_46_46 Q8NHG7 Q8NHG7 Small VCP/p97-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20130.20130.3 11.25 11.25 99 1 1 1 0 585.3231 1673.9838 S46s TMT10 40 (R) GILDVQsVQEK (R) GILDVQS(1.0)VQEK K:TMT10,s:Phosphorylated S SVIP 8556.6 1 1 6513.1 11.25 HUMAN 1 7.9653 -6.5391 RGIPHSASPVSPDGV-p Q6PJF5;S325-p RGIPHSASPVSPDGV 0.139286671509888 0.00783394246445399 -0.425666666666667 -0.608 17.5273549709104 30.0473974337043 -0.425666666666667 -0.608 0.0176711373676939 0.000989145675523468 -3.36723468924021 -6.43633408486706 Q6PJF5 RHBDF2 Q6PJF5.S325.p_RHBDF2 Q6PJF5_S325sS328s_2_2_325_328 Q6PJF5 Q6PJF5 Inactive rhomboid protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23758.23758.3 14.19 14.19 3.152 3 2 2 0 839.7676 2357.3593 S325s S328s TMT10 319 (R) GIPHSAsPVsPDGVQIPLK (E) GIPHS(0.0)AS(0.99)PVS(0.99)PDGVQIPLK K:TMT10,s:Phosphorylated S RHBDF2 98224.8 1 10 1595.1 129.07 HUMAN 1 -17.5274 -30.0474 RGIPHSLSGLQDPII-p Q9ULH0-4;S1614-p RGIPHSLSGLQDPII 0.69223739326445 0.0304676998806353 -0.059 -0.292 2.99537174490075 20.4960488485256 -0.059 -0.292 0.501721631118083 0.00892062154942221 -0.719472091174366 -3.98238078840664 Q9ULH0 KIDINS220 Q9ULH0.4.S1614.p_KIDINS220 Q9ULH0-4_S1614s _1_1_1614_1614 Q9ULH0-4 Q9ULH0|Q9ULH0-4|Q9ULH0-2 Isoform 4 of Kinase D-interacting substrate of 220 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23546.23546.3 14.99 14.99 1.692 2 1 1 0 661.6948 1903.0963 S1614s TMT10 1608 (R) GIPHSLsGLQDPIIAR (M) GIPHS(0.0)LS(0.99)GLQDPIIAR s:Phosphorylated S KIDINS220 196163.1 1 16 306.1 373.6 HUMAN 1 -2.9954 -20.496 RGISQDRSPLVKVRS-p Q5T5U3;S615-p RGISQDRSPLVKVRS 0.132729111226826 0.381866170442185 0.258333333333333 0.118333333333333 18.1010962976625 5.55488762964948 0.258333333333333 0.118333333333333 0.0154842569758661 0.278298738057495 3.48275417172616 1.20457563794274 Q5T5U3 ARHGAP21 Q5T5U3.S615.p_ARHGAP21 Q5T5U3_S615s _1_1_615_615 Q5T5U3 Q5T5U3|A0A1B0GV73|F8W9U9|Q5T5U3-3 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10750.10750.3 10.7 5.41 2.724 2 1 1 0 579.9934 1658.0001 S615s TMT10 609 (R) GISQDRsPLVK (V) GIS(0.0)QDRS(0.99)PLVK K:TMT10,s:Phosphorylated S ARHGAP21 218696.3 5 10 148.1 512.52 HUMAN 1 18.1011 5.5549 RGKKQLGSLKKKFKS-p Q15527;S234-p RGKKQLGSLKKKFKS 0.572070063559519 0.0132282127607495 -0.115666666666667 -0.493666666666667 4.46786433991402 26.1440219715967 -0.115666666666667 -0.493666666666667 0.357448571671511 0.00242995260418445 -1.00557071383783 -5.33242481693443 Q15527 SURF2 Q15527.S234.p_SURF2 Q15527_S234s _1_1_234_234 Q15527 Q15527 Surfeit locus protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12528.12528.3 8.98 1.55 99 1 1 1 0 514.319 1460.9768 S234s TMT10 230 (K) KQLGsLK (K) KQLGS(1.0)LK K:TMT10,s:Phosphorylated S SURF2 30103.5 2 6 1281.1 158.83 HUMAN 1 -4.4679 -26.144 RGKRVALSDDETKET-p Q15054;S307-p RGKRVALSDDETKET 0.546890359308701 0.367763142305595 -0.112666666666667 0.0916666666666667 4.83800921652827 5.76143449283291 -0.112666666666667 0.0916666666666667 0.328245724776633 0.265372887945262 -1.07428711283044 1.24166164875338 Q15054 POLD3 Q15054.S307.p_POLD3 Q15054_S307s _1_1_307_307 Q15054 Q15054|Q15054-2|Q15054-3 DNA polymerase delta subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10032.10032.4 18.2 18.2 3.793 3 1 1 0 608.8031 2352.2229 S307s TMT10 303 (K) RVALsDDETKETENMR (K) RVALS(0.99)DDET(0.0)KET(0.0)ENMR K:TMT10,s:Phosphorylated S POLD3 51684.7 23 2 2048.1 100.6 HUMAN 1 -4.838 5.7614 RGLAAPGSRDHQKEK-p Q5BJD5;S35-p RGLAAPGSRDHQKEK 0.0721955710812666 0.122522050489403 -0.557 -0.169333333333333 24.5828526528929 12.0254571832065 -0.557 -0.169333333333333 0.00348108585634114 0.0627269659628213 -4.93889612524061 -2.33568246556292 Q5BJD5 TMEM41B Q5BJD5.S35.p_TMEM41B Q5BJD5_S35s _1_1_35_35 Q5BJD5 Q5BJD5 Transmembrane protein 41B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5013.5013.4 10.33 5.73 99 1 1 1 0 444.4896 1694.9702 S35s TMT10 29 (R) GLAAPGsRDHQK (E) GLAAPGS(1.0)RDHQK K:TMT10,s:Phosphorylated S TMEM41B 32684 1 1 6650.1 10.33 HUMAN 1 -24.5829 -12.0255 RGLERNDSWGSFDLR-p Q7Z417;S652-p RGLERNDSWGSFDLR 0.864901984525087 0.0800986161944382 -0.0296666666666667 -0.245333333333333 1.22530805051998 14.5490579011382 -0.0296666666666667 -0.245333333333333 0.754169899733965 0.0350827969504885 -0.32947733507497 -2.79254122948275 Q7Z417 NUFIP2 Q7Z417.S652.p_NUFIP2 Q7Z417_S652s _1_1_652_652 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19517.19517.3 12.21 6.4 2.154 2 1 1 0 654.3084 1880.9452 S652s TMT10 646 (R) GLERNDsWGSFDLR (A) GLERNDS(0.99)WGS(0.0)FDLR s:Phosphorylated S NUFIP2 76176.8 11 18 304.1 375.48 HUMAN 1 -1.2253 -14.5491 RGLERYISQEEGPLS-p Q5VUA4;S207-p RGLERYISQEEGPLS 0.128321216132974 0.0205017219056887 0.290666666666667 0.318 18.4679423508205 23.108574848313 0.290666666666667 0.318 0.014230028336983 0.00488812738541599 3.55759465662435 4.57498618427667 Q5VUA4 ZNF318 Q5VUA4.S207.p_ZNF318 Q5VUA4_S207s _1_1_207_207 Q5VUA4 Q5VUA4|Q5VUA4-2 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.35156.35156.3 21.88 21.88 4.762 4 1 1 0 922.4353 2685.3245 S207s TMT10 205 (R) YIsQEEGPLSPFLGQLDEDYR (T) Y(0.0)IS(0.99)QEEGPLS(0.0)PFLGQLDEDY(0.0)R s:Phosphorylated S ZNF318 252762.4 4 7 37.1 870.88 HUMAN 1 18.4679 23.1086 RGLGLALSPVSRKGL-p Q8IYS2-2;S646-p RGLGLALSPVSRKGL 0.275481256258864 0.0038559829297549 -0.155 -0.611 10.5968646069837 35.6954989864272 -0.155 -0.611 0.0871592609956349 0.00026943257476626 -2.08562441537429 -8.35380815446798 Q8IYS2 KIAA2013 Q8IYS2.2.S646.p_KIAA2013 Q8IYS2-2_S646s _1_1_646_646 Q8IYS2-2 Q8IYS2-2 Isoform 2 of Uncharacterized protein KIAA2013 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19787.19787.3 11.21 11.21 11.205 2 1 1 0 579.3473 1656.0572 S646s TMT10 640 (R) GLGLALsPVSRK (G) GLGLALS(0.99)PVS(0.0)RK K:TMT10,s:Phosphorylated S KIAA2013 73250.6 2 1 5224.1 21.58 HUMAN 1 -10.5969 -35.6955 RGLGRRPSDLTISIN-p Q86UU0;S915-p RGLGRRPSDLTISIN 0.421053324853859 0.0493423143818391 0.118333333333333 0.425666666666667 6.9275929034107 17.4804685052892 0.118333333333333 0.425666666666667 0.202880688324478 0.0178629486373806 1.44833268704317 3.35522714233622 Q86UU0 BCL9L Q86UU0.S915.p_BCL9L Q86UU0_S915s _1_1_915_915 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20818.20818.4 23.72 23.72 1.235 4 1 1 0 695.1119 2697.458 S915s TMT10 913 (R) RPsDLTISINQMGSPGMGHLK (S) RPS(0.99)DLT(0.0)IS(0.0)INQMGS(0.0)PGMGHLK K:TMT10,s:Phosphorylated S BCL9L 157526.3 3 12 139.1 524.37 HUMAN 1 6.9276 17.4805 RGLKKQWSTSSKSSR-p Q9BZ72;S305-p RGLKKQWSTSSKSSR 0.998180995519267 0.120732064280717 -0.000333333333333338 -0.183 0.0131800058918889 12.1074153127456 -0.000333333333333338 -0.183 0.99696979186719 0.0615543101878176 -0.00397638461638426 -2.35021662154609 Q9BZ72 PITPNM2 Q9BZ72.S305.p_PITPNM2 Q9BZ72_S305s _1_1_305_305 Q9BZ72 Q9BZ72|Q9BZ72-2|S4R414 Membrane-associated phosphatidylinositol transfer protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10129.10129.2 7.67 7.67 1.127 4 1 1 0 681.3473 1281.7203 S305s TMT10 303 (K) QWsTSSK (S) QWS(0.99)T(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S PITPNM2 150071.6 1 1 6278.1 12.63 HUMAN 1 -0.0132 -12.1074 RGLPATCSLPHLAGR-p B7Z1M9;S81-p RGLPATCSLPHLAGR 0.225471163382174 0.54487492798692 0.206666666666667 -0.099 12.4293901495525 3.54649317181316 0.206666666666667 -0.099 0.0571558891196823 0.441927149341924 2.40873627776357 -0.829254885684645 B7Z1M9 C2CD4D B7Z1M9.S81.p_C2CD4D B7Z1M9_S81s _1_1_81_81 B7Z1M9 B7Z1M9 C2 calcium-dependent domain-containing protein 4D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17706.17706.3 11.88 11.88 1.788 2 1 1 0 586.9693 1678.926 S81s TMT10 75 (R) GLPATCsLPHLAGR (E) GLPAT(0.0)CS(0.99)LPHLAGR C:Carbamidomethylation,s:Phosphorylated S C2CD4D 38096 1 1 3907.1 40.97 HUMAN 1 12.4294 -3.5465 RGLPSTASGRLRGTQ-p P48730-2;S331-p RGLPSTASGRLRGTQ 0.843482263601374 0.207208160030084 -0.0316666666666667 -0.159666666666667 1.43150807149009 8.9914672929971 -0.0316666666666666 -0.159666666666667 0.719199195383478 0.126140128971501 -0.378870227283534 -1.80623668036461 P48730 CSNK1D P48730.2.S331.p_CSNK1D P48730-2_S331s _1_1_331_331 P48730-2 H7BYT1|P48730|P48730-2 Isoform 2 of Casein kinase I isoform delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7238.7238.2 9.78 5.25 1.736 3 1 1 0 577.7922 1074.6105 S331s TMT10 325 (R) GLPSTAsGR (L) GLPS(0.0)T(0.0)AS(0.99)GR s:Phosphorylated S CSNK1D 47116.9 4 9 1498.1 136.39 HUMAN 1 -1.4315 -8.9915 RGLPTGDSPLGPMTH-p Q9NVS9;S241-p RGLPTGDSPLGPMTH 0.512060896825979 0.293316564679488 0.130666666666667 -0.104666666666667 5.37413288492431 7.03053829764705 0.130666666666667 -0.104666666666667 0.290126040833415 0.198128143547911 1.17219945602814 -1.46595094703615 Q9NVS9 PNPO Q9NVS9.S241.p_PNPO Q9NVS9_S241s _1_1_241_241 Q9NVS9 Q9NVS9|Q9NVS9-3|Q9NVS9-4 Pyridoxine-5'-phosphate oxidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22012.22012.4 19.54 17.63 3.49 4 1 1 0 756.3555 2942.4304 S241s TMT10 235 (R) GLPTGDsPLGPMTHRGEEDWLYER (L) GLPT(0.0)GDS(0.99)PLGPMT(0.0)HRGEEDWLY(0.0)ER s:Phosphorylated S PNPO 30329.8 3 3 3164.1 58.9 HUMAN 1 5.3741 -7.0305 RGLPWSCSADEVQRF-p G8JLB6;S23-p RGLPWSCSADEVQRF 0.146270525101547 0.0957606999027242 0.381 0.224666666666667 17.0015665345826 13.4734860328425 0.381 0.224666666666667 0.0199454273784025 0.0449418966534616 3.2629433519921 2.59526051900906 G8JLB6 HNRNPH1 G8JLB6.S23.p_HNRNPH1 G8JLB6_S23s _1_1_23_23 G8JLB6 G8JLB6|P31943|E9PCY7|D6RIH9|D6R9D3 Heterogeneous nuclear ribonucleoprotein H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19008.19008.2 10.82 5.43 1.132 2 1 1 0 907.4108 1733.8478 S23s TMT10 17 (R) GLPWSCsADEVQR (F) GLPWS(0.0)CS(0.99)ADEVQR C:Carbamidomethylation,s:Phosphorylated S HNRNPH1 51514.2 1 2 990.2 191.56 HUMAN 1 17.0016 13.4735 RGLPWSCSVEDVQNF-p P52597;S23-p RGLPWSCSVEDVQNF 0.487977822144069 0.191665078422291 0.0983333333333333 0.151666666666667 5.74158182574913 9.43438493000206 0.0983333333333333 0.151666666666667 0.26658874945612 0.113909909547667 1.23838848209369 1.88287440599895 P52597 HNRNPF P52597.S23.p_HNRNPF P52597_S23s_1_1_23_23 P52597 P52597 Heterogeneous nuclear ribonucleoprotein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.32400.32400.4 10.26 10.26 1.321 6 1 1 0 1016.2236 3980.8897 S23s N29n TMT10 17 (R) GLPWSCsVEDVQnFLSDCTIHDGAAGVHFIYTR (E) GLPWS(0.0)CS(0.99)VEDVQN(1.0)FLS(0.0)DCT(0.0)IHDGAAGVHFIY(0.0)T(0.0)R C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated HNRNPF 46013.4 5 7 990.1 191.56 HUMAN 1 5.7416 9.4344 RGLQRSQSDLSSRYS-p Q1W6H9;S202-p RGLQRSQSDLSSRYS 0.157598656025864 0.114723540358427 0.335333333333333 -0.292 16.0962482526881 12.4035013595862 0.335333333333333 -0.292 0.0245683038556233 0.0574976194358541 3.08669282569504 -2.40286915686436 Q1W6H9 FAM110C Q1W6H9.S202.p_FAM110C Q1W6H9_S202s _1_1_202_202 Q1W6H9 Q1W6H9 Protein FAM110C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4978.4978.2 11.88 6.66 1.389 4 1 1 0 594.7779 1108.5796 S202s TMT10 200 (R) SQsDLSSR (Y) S(0.0)QS(0.99)DLS(0.0)S(0.0)R s:Phosphorylated S FAM110C 34147.7 2 3 2986.1 64.03 HUMAN 1 16.0962 -12.4035 RGLRDSHSSEEDEAS-p Q5JTV8;S156-p RGLRDSHSSEEDEAS 0.40812613909849 0.42456247007069 0.1195 0.0755 7.18033054784669 4.95211508514871 0.1195 0.0755000000000001 0.191411023376293 0.319733757476349 1.49254367205602 1.09505605296004 Q5JTV8 TOR1AIP1 Q5JTV8.S156.p_TOR1AIP1 Q5JTV8_S156sS157s_2_2_156_157 Q5JTV8 J3KN66|Q5JTV8-3|A0A0A0MSK5|Q5JTV8-2 Torsin-1A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14204.14204.3 20.01 20.01 1.424 9 2 2 0 1043.1301 2967.4431 S156s S157s Hydrogen 153 (R) DSHssEEDEASSQTDLSQTISKK (T) DS(0.0)HS(0.99)S(0.99)EEDEAS(0.0)S(0.0)QT(0.0)DLS(0.0)QT(0.0)IS(0.0)KK K:TMT10-Lys-Only,s:Phosphorylated S TOR1AIP1 66418.4 46 18 585.1 265.22 HUMAN 2 7.1803 4.9521 RGLRKQITMEELVRS-p Q15149;T4030-p RGLRKQITMEELVRS 0.743065177288724 0.0652944656004785 0.103 -0.249666666666667 2.45086823996938 15.7698835958644 0.103 -0.249666666666667 0.56873921733725 0.0264857112742047 0.606486776793891 -3.02203176655917 Q15149 PLEC Q15149.T4030.p_PLEC Q15149_T4030t _1_1_4030_4030 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21066.21066.2 12.84 12.84 99 1 1 1 0 714.3617 1347.7504 T4030t TMT10 4028 (K) QItMEELVR (S) QIT(1.0)MEELVR t:Phosphorylated T PLEC 533778 4 31 44.1 794.85 HUMAN 1 2.4509 -15.7699 RGLRKQVSARDLFRA-p A0A087X1U6;S1529-p RGLRKQVSARDLFRA 0.816162932725909 0.13593628768413 -0.0923333333333333 -0.679 1.69384011192057 11.4195823711538 -0.0923333333333333 -0.679 0.67704258931594 0.0721176826084019 -0.439880125397511 -2.22873755631015 A0A087X1U6 EPPK1 A0A087X1U6.S1529.p_EPPK1 A0A087X1U6_S1529s_1_1_1529_1529 A0A087X1U6 P58107|A0A087X1U6|A0A075B730 Epiplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18632.18632.2 11.76 6.2 99 1 1 1 0 577.7717 1091.5956 Q1527q S1529s Hydrogen 1527 (K) qVsARDLFR (A) Q(1.0)VS(1.0)ARDLFR q:Pyroglutamic acid,s:Phosphorylated S EPPK1 558101.4 4 5 680.1 245.5 HUMAN 1 -1.6938 -11.4196 RGLRRQVSASELHTS-p A0A087X1U6;S2718-p RGLRRQVSASELHTS 0.488088514771249 0.295232287727978 0.137333333333333 -0.126666666666667 5.73815219515616 6.99438981278992 0.137333333333333 -0.126666666666667 0.266799358173593 0.199784144704083 1.2377737044973 -1.45962820624652 A0A087X1U6 EPPK1 A0A087X1U6.S2718.p_EPPK1 A0A087X1U6_S2718s_1_1_2718_2718 A0A087X1U6 P58107|A0A087X1U6|A0A075B730 Epiplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24116.24116.2 21.63 21.63 1.125 5 1 1 0 1029.4976 1995.0505 Q2716q S2718s Hydrogen 2716 (R) qVsASELHTSGILGPETLR (D) Q(1.0)VS(0.99)AS(0.0)ELHT(0.0)S(0.0)GILGPET(0.0)LR q:Pyroglutamic acid,s:Phosphorylated S EPPK1 558101.4 43 12 680.1 245.5 HUMAN 1 5.7382 -6.9944 RGLRRSDSVSASERA-p O43719;S387-p RGLRRSDSVSASERA 0.0635370415880919 0.0130423999112199 0.601333333333333 0.860666666666667 25.8574833632428 26.246810557722 0.601333333333333 0.860666666666667 0.00259568306510469 0.00237311587320013 5.26428096777876 5.35951769623364 O43719 HTATSF1 O43719.S387.p_HTATSF1 O43719_S387s _1_1_387_387 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3872.3872.3 9.54 9.54 1.278 4 1 1 0 468.2226 1322.6862 S387s TMT10 384 (R) RSDsVSASER (A) RS(0.0)DS(0.99)VS(0.0)AS(0.0)ER s:Phosphorylated S HTATSF1 86421.8 2 3 149.1 512 HUMAN 1 25.8575 26.2468 RGLSDHVSLDGQELG-p Q7L8J4;S362-p RGLSDHVSLDGQELG 0.296473227903219 0.0519221136406175 0.15 0.390333333333333 9.94355492772976 17.1467779926992 0.15 0.390333333333334 0.101308178576117 0.0192895546410501 1.97190565656092 3.28906677846593 Q7L8J4 SH3BP5L Q7L8J4.S362.p_SH3BP5L Q7L8J4_S362s _1_1_362_362 Q7L8J4 Q7L8J4|Q7L8J4-2 SH3 domain-binding protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13630.13630.3 19.62 19.62 2.055 3 1 1 0 588.6031 1683.8297 S362s Hydrogen 356 (R) GLSDHVsLDGQELGTR (S) GLS(0.0)DHVS(0.99)LDGQELGT(0.0)R s:Phosphorylated S SH3BP5L 43726.7 8 6 1783.1 115.12 HUMAN 1 9.9436 17.1468 RGLVAAYSGDSDNEE-p P52756;S621-p RGLVAAYSGDSDNEE 0.74246433868007 0.137834895278433 -0.0473333333333333 0.156 2.45627060660395 11.341287768 -0.0473333333333334 0.156 0.568032179218199 0.0734296102730257 -0.607632765351348 2.21497711757656 P52756 RBM5 P52756.S621.p_RBM5 P52756_S621sS624s_2_2_621_624 P52756 P52756 RNA-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29345.29345.5 20.51 20.51 2.687 4 2 2 0 703.9227 3355.6429 S621s S624s TMT10 615 (R) GLVAAYsGDsDNEEELVERLESEEEK (L) GLVAAY(0.0)S(0.99)GDS(0.99)DNEEELVERLES(0.0)EEEK K:TMT10,s:Phosphorylated S RBM5 92665.7 6 7 560.1 271.79 HUMAN 1 -2.4563 11.3413 RGLVAAYSGESDSEE-p A0A0A0MR66;S798-p RGLVAAYSGESDSEE 0.906395416103857 0.0929871975405746 -0.0236666666666667 0.296666666666667 0.838816625442884 13.6453161358527 -0.0236666666666667 0.296666666666667 0.824362708462966 0.0431984721022695 -0.232943794799134 2.62649811706361 A0A0A0MR66 RBM10 A0A0A0MR66.S798.p_RBM10 A0A0A0MR66_S798sS801sS803s_3_3_798_803 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2|P98175-3|P98175-4 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14223.14223.5 8.97 8.97 1.787 4 3 3 0 708.1047 3296.5919 S798s S801s S803s TMT10 792 (R) GLVAAYsGEsDsEEEQERGGPEREEK (L) GLVAAY(0.0)S(0.99)GES(0.99)DS(0.99)EEEQERGGPEREEK K:TMT10,s:Phosphorylated S RBM10 110706.4 3 21 270.1 394.36 HUMAN 1 -0.8388 13.6453 RGLVRPGSSREKVPG-p P49750-4;S1088-p RGLVRPGSSREKVPG 0.327770976645339 0.928193312474012 -0.154 -0.0123333333333333 9.06074535450343 0.455976967628756 -0.154 -0.0123333333333333 0.124143922827282 0.9003312058631 -1.81887884912019 -0.131222106352016 P49750 YLPM1 P49750.4.S1088.p_YLPM1 P49750-4_S1088s _1_1_1088_1088 P49750-4 P49750-4|P49750-3 Isoform 4 of YLP motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5510.5510.3 9.41 9.41 1.165 2 1 1 0 413.2249 1157.6952 S1088s TMT10 1082 (R) GLVRPGsSR (E) GLVRPGS(0.99)S(0.0)R s:Phosphorylated S YLPM1 241869.3 4 10 669.1 249.34 HUMAN 1 -9.0607 -0.456 RGLWSTDSAEEDKET-p Q99549-2;S403-p RGLWSTDSAEEDKET 0.497175098488218 0.248002756102177 -0.156 0.16 5.58897851386739 7.977725563467 -0.156 0.16 0.276122723671428 0.159304279846731 -1.21098063015763 1.63078096158418 Q99549 MPHOSPH8 Q99549.2.S403.p_MPHOSPH8 Q99549-2_S403s _1_1_403_403 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16202.16202.2 16.69 16.69 1.603 4 1 1 0 1232.1182 2383.2596 S403s TMT10 397 (R) GLWSTDsAEEDKETK (R) GLWS(0.0)T(0.0)DS(0.99)AEEDKET(0.0)K K:TMT10,s:Phosphorylated S MPHOSPH8 98148.4 6 17 242.1 413.34 HUMAN 1 -5.589 7.9777 RGNDPLTSSPGRSSR-p P49736;S26-p RGNDPLTSSPGRSSR 0.549780068218602 0.116793277977743 0.107666666666667 -0.306666666666667 4.79292829070445 12.2990089842724 0.107666666666667 -0.306666666666667 0.331670748544994 0.0588978038805855 1.06597082951871 -2.38426080170464 P49736 MCM2 P49736.S26.p_MCM2 P49736_T25tS26sS27s_3_3_25_27 P49736 P49736|F8WDM3 DNA replication licensing factor MCM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9245.9245.3 9.59 5.97 99 3 3 3 0 575.904 1485.7971 T25t S26s S27s TMT10 19 (R) RGNDPLtssPGR (S) RGNDPLT(1.0)S(1.0)S(1.0)PGR t:Phosphorylated T,s:Phosphorylated S MCM2 102579 2 14 259.1 397.63 HUMAN 1 4.7929 -12.299 RGNQSGRSPNNPFSR-p Q9UNY4;S883-p RGNQSGRSPNNPFSR 0.87285400617939 0.0137719194356848 -0.0353333333333333 -0.558666666666667 1.15751134080832 25.8449409407005 -0.0353333333333333 -0.558666666666667 0.76603544625206 0.00260319023167341 -0.312934827170726 -5.25415833740589 Q9UNY4 TTF2 Q9UNY4.S883.p_TTF2 Q9UNY4_S883s _1_1_883_883 Q9UNY4 Q9UNY4 Transcription termination factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6274.6274.3 15.41 9.88 2.454 3 1 1 0 609.6212 1746.8833 S883s TMT10 877 (R) GNQSGRsPNNPFSR (V) GNQS(0.0)GRS(0.99)PNNPFS(0.0)R s:Phosphorylated S TTF2 130841 1 3 3266.1 55.57 HUMAN 1 -1.1575 -25.8449 RGNRTDGSISGDRQP-p P51116;S601-p RGNRTDGSISGDRQP 0.18709748510332 0.328979915302619 0.214 0.139 14.3053480017337 6.39267790880775 0.214 0.139 0.0371077993688186 0.22947332533512 2.74915526678365 1.35388511491542 P51116 FXR2 P51116.S601.p_FXR2 P51116_S601s _1_1_601_601 P51116 P51116 Fragile X mental retardation syndrome-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17082.17527.3 16.56 16.56 1.153 6 1 1 0 816.0657 2366.2149 S601s TMT10 598 (R) TDGsISGDRQPVTVADYISR (A) T(0.0)DGS(0.99)IS(0.0)GDRQPVT(0.0)VADY(0.0)IS(0.0)R s:Phosphorylated S FXR2 74564.3 11 7 844.1 213.98 HUMAN 1 14.3053 6.3927 RGNSRPGTPSAEGGS-p P35269;T389-p RGNSRPGTPSAEGGS 0.861185379223848 0.726584374779792 0.0256666666666667 0.0626666666666667 1.26774713751279 1.90825435815084 0.0256666666666667 0.0626666666666667 0.746836072253837 0.6444282406803 0.339754179036475 0.48833131236177 P35269 GTF2F1 P35269.T389.p_GTF2F1 P35269_T389t _1_1_389_389 P35269 P35269 General transcription factor IIF subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4973.4973.3 12.14 7.19 2.301 8 1 1 0 743.3548 2148.0843 T389t TMT10 383 (R) GNSRPGtPSAEGGSTSSTLR (A) GNS(0.0)RPGT(0.99)PS(0.0)AEGGS(0.0)T(0.0)S(0.0)S(0.0)T(0.0)LR t:Phosphorylated T GTF2F1 58296.5 3 7 1159.1 171.17 HUMAN 1 1.2677 1.9083 RGPASVPSVGKAVAT-p E7ETY2;S849-p RGPASVPSVGKAVAT 0.336940767668124 0.251277043516527 0.164666666666667 -0.125666666666667 8.8028865165124 7.89999087853905 0.164666666666667 -0.125666666666667 0.131738085692804 0.162181350364053 1.77424224180025 -1.61730090551433 E7ETY2 TCOF1 E7ETY2.S849.p_TCOF1 E7ETY2_S849s _1_1_849_849 E7ETY2 Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-8|Q13428-2|Q13428-5 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13068.13068.2 12.95 7.72 3.805 2 1 1 0 718.9006 1356.8251 S849s TMT10 843 (R) GPASVPsVGK (A) GPAS(0.0)VPS(0.99)VGK K:TMT10,s:Phosphorylated S TCOF1 152529.5 2 19 19.1 1034.65 HUMAN 1 8.8029 -7.9 RGPAYGLSREVQQKI-p P37802;S11-p RGPAYGLSREVQQKI 0.569824107592447 0.607053819692363 0.0873333333333333 0.105666666666667 4.4942133193463 2.94312443879975 0.0873333333333333 0.105666666666667 0.355286469214598 0.507793989588268 1.01049641416894 0.708737969950235 P37802 TAGLN2 P37802.S11.p_TAGLN2 P37802_S11s _1_1_11_11 P37802 P37802-2 Transgelin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13199.13199.3 11.85 11.85 11.853 2 1 1 0 657.6878 1891.0802 S11s TMT10 5 (R) GPAYGLsREVQQK (I) GPAY(0.0)GLS(0.99)REVQQK K:TMT10,s:Phosphorylated S TAGLN2 22562.2 2 1 2811.1 69.69 HUMAN 1 4.4942 2.9431 RGPKVDVSAPDVEAH-p Q09666;S613-p RGPKVDVSAPDVEAH 0.240293144810692 0.151016134855453 0.234333333333333 0.256333333333333 11.838738558399 10.7952308854072 0.234333333333333 0.256333333333333 0.0654826345777341 0.083267765689172 2.30376357392922 2.11933787556757 Q09666 AHNAK Q09666.S613.p_AHNAK Q09666_S613s _1_1_613_613 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20423.20423.4 14.92 14.92 99 1 1 1 0 753.8989 2932.6136 S613s TMT10 607 (R) GPKVDVsAPDVEAHGPEWNLK (M) GPKVDVS(1.0)APDVEAHGPEWNLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 33 1.1 4313.36 HUMAN 1 11.8387 10.7952 RGPLTSGSDEENVAL-p O43237;S205-p RGPLTSGSDEENVAL 0.390292145863872 0.790723356628341 -0.126 -0.032 7.55293273874771 1.4194983834282 -0.126 -0.032 0.175673690987413 0.721190772977099 -1.55749539246433 -0.375990307782684 O43237 DYNC1LI2 O43237.S205.p_DYNC1LI2 O43237_S205s _1_1_205_205 O43237 O43237|O43237-2|B4E2E0 Cytoplasmic dynein 1 light intermediate chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.36617.36617.4 24.24 24.24 1.168 5 1 1 0 1042.5504 4087.215 S205s TMT10 199 (R) GPLTSGsDEENVALPLGDNVLTHNLGIPVLVVCTK (C) GPLT(0.0)S(0.0)GS(0.99)DEENVALPLGDNVLT(0.0)HNLGIPVLVVCT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DYNC1LI2 54383.6 15 4 576.1 267.98 HUMAN 1 -7.5529 -1.4195 RGPQYRASPPAESMS-p Q9HCD6-2;S1555-p RGPQYRASPPAESMS 0.889554663153291 0.188832033878987 -0.021 -0.167333333333333 0.992607565482688 9.51974270501766 -0.021 -0.167333333333333 0.795681468562751 0.111692941758793 -0.272023083768055 -1.89765375143104 Q9HCD6 TANC2 Q9HCD6.2.S1555.p_TANC2 Q9HCD6-2_S1555s _1_1_1555_1555 Q9HCD6-2 Q9HCD6-2 Isoform 2 of Protein TANC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9307.9307.4 20.82 19.03 7.319 5 1 1 0 591.04 2281.1709 S1555s TMT10 1548 (R) RGPQYRAsPPAESMSVYR (S) RGPQY(0.0)RAS(0.99)PPAES(0.0)MS(0.0)VY(0.0)R s:Phosphorylated S TANC2 222282.4 6 11 348.1 351.89 HUMAN 1 -0.9926 -9.5197 RGPRAKVSPVNDVDV-p Q8WUX9;S232-p RGPRAKVSPVNDVDV 0.732651492896551 0.109428042333078 -0.0543333333333334 0.203 2.55901317526667 12.6913658534549 -0.0543333333333334 0.203 0.55475175198925 0.0538100523620481 -0.629325815712438 2.4542900650407 Q8WUX9 CHMP7 Q8WUX9.S232.p_CHMP7 Q8WUX9_S232s _1_1_232_232 Q8WUX9 Q8WUX9 Charged multivesicular body protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.33704.33704.4 11.25 11.25 11.246 4 1 1 0 829.1874 3233.7604 S232s TMT10 229 (R) AKVsPVNDVDVGVYQLMQSEQLLSR (K) AKVS(0.99)PVNDVDVGVY(0.0)QLMQS(0.0)EQLLS(0.0)R K:TMT10,s:Phosphorylated S CHMP7 51195.3 1 1 1632.1 125.1 HUMAN 1 -2.559 12.6914 RGPRARRSASPHDVD-p Q66K74;S729-p RGPRARRSASPHDVD 0.289563930898932 0.106160016622062 -0.216166666666667 -0.174 10.1476279403158 12.8699736092609 -0.216166666666667 -0.174 0.096657866747305 0.0516419507384947 -2.00737055153044 -2.48631519330107 Q66K74 MAP1S Q66K74.S729.p_MAP1S Q66K74_S729sS731s_2_2_729_731 Q66K74 Q66K74|Q66K74-2 Microtubule-associated protein 1S HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19844.19844.5 17.77 15.03 17.772 3 2 2 0 621.0851 2941.4701 S729s S731s TMT10 729 (R) sAsPHDVDLCLVSPCEFEHRK (A) S(0.99)AS(0.99)PHDVDLCLVS(0.0)PCEFEHRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP1S 113179.3 7 18 456.1 307.14 HUMAN 2 -10.1476 -12.87 RGPSPACSDSSTLAL-p Q5TZA2;S516-p RGPSPACSDSSTLAL 0.992821359885708 0.00844241545590718 -0.002 0.563333333333333 0.0645591670063151 29.4439469219643 -0.00200000000000003 0.563333333333333 0.985244645526168 0.00113659386573972 -0.0193640578654379 6.25503757833004 Q5TZA2 CROCC Q5TZA2.S516.p_CROCC Q5TZA2_S512sS516s_2_2_512_516 Q5TZA2 Q5TZA2 Rootletin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23022.23022.5 10.62 10.62 1.126 6 2 2 0 585.4926 2763.4976 S512s S516s TMT10 509 (R) RGPsPACsDSSTLALIHSALHK (R) RGPS(0.99)PACS(0.99)DS(0.0)S(0.0)T(0.0)LALIHS(0.0)ALHK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CROCC 228918.7 1 11 912.1 201.7 HUMAN 1 -0.0646 29.4439 RGPSTPKSPGASNFS-p Q9Y4E8;S229-p RGPSTPKSPGASNFS 0.357240535601592 0.00897688600590423 -0.316666666666667 -0.613666666666667 8.30879935007254 28.9919744057847 -0.316666666666667 -0.613666666666667 0.147611456330052 0.00126125400822604 -1.68869108686184 -6.1219196479187 Q9Y4E8 USP15 Q9Y4E8.S229.p_USP15 Q9Y4E8_S229s _1_1_229_229 Q9Y4E8 Q9Y4E8 Ubiquitin carboxyl-terminal hydrolase 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16240.16240.4 17.86 13.83 2.116 6 1 1 0 635.8491 2460.4065 S229s TMT10 223 (R) GPSTPKsPGASNFSTLPK (I) GPS(0.0)T(0.0)PKS(0.99)PGAS(0.0)NFS(0.0)T(0.0)LPK K:TMT10,s:Phosphorylated S USP15 113672.2 8 3 1214.1 165.83 HUMAN 1 -8.3088 -28.992 RGPSTSRSPNKRGPP-p O14578-3;S1437-p RGPSTSRSPNKRGPP 0.243304829027304 0.0814348975501825 0.467 -0.442666666666667 11.7417499600834 14.4423960645502 0.467 -0.442666666666667 0.0669614738343286 0.0359550911062301 2.28661025146163 -2.77278406943703 O14578 CIT O14578.3.S1437.p_CIT O14578-3_S1437s _1_1_1437_1437 O14578-3 O14578-3 Isoform 3 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3735.3735.3 8.23 8.23 1.425 4 1 1 0 523.6112 1488.8535 S1437s TMT10 1431 (R) GPSTSRsPNK (R) GPS(0.0)T(0.0)S(0.0)RS(0.99)PNK K:TMT10,s:Phosphorylated S CIT 178629.2 1 2 366.2 342.11 HUMAN 1 11.7417 -14.4424 RGPVSQNSEVGEEET-p Q86YV5;S510-p RGPVSQNSEVGEEET 0.531734774301321 0.583312989164803 0.131 -0.0556666666666667 5.07637565417818 3.16045637933026 0.131 -0.0556666666666667 0.310715153770367 0.483008042364322 1.11803610789347 -0.752709623920787 Q86YV5 SGK223 Q86YV5.S510.p_SGK223 Q86YV5_S510s _1_1_510_510 Q86YV5 Q86YV5 Tyrosine-protein kinase PRAG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11925.11925.3 22.7 22.7 4.267 6 1 1 0 872.0658 2534.2168 S510s TMT10 504 (R) GPVSQNsEVGEEETSAGQGLSSR (E) GPVS(0.0)QNS(0.99)EVGEEET(0.0)S(0.0)AGQGLS(0.0)S(0.0)R s:Phosphorylated S PRAG1 152359.5 1 7 223.1 426.19 HUMAN 1 5.0764 -3.1605 RGQRKERSPQQNIVS-p Q8NEZ4-3;S200-p RGQRKERSPQQNIVS 0.460948870369204 0.00999477791167504 -0.215 0.442333333333333 6.20140292006666 28.1041960918527 -0.215 0.442333333333333 0.239805813889395 0.00154732089689255 -1.32036359863644 5.86689108615038 Q8NEZ4 KMT2C Q8NEZ4.3.S200.p_KMT2C Q8NEZ4-3_S200s _1_1_200_200 Q8NEZ4-3 Q8NEZ4-3|H0YMU7 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14885.14885.3 23.17 23.17 5.306 7 1 1 0 1110.8723 3250.6374 S200s TMT10 198 (K) ERsPQQNIVSCVSVSTQTASDDQAGK (L) ERS(0.99)PQQNIVS(0.0)CVS(0.0)VS(0.0)T(0.0)QT(0.0)AS(0.0)DDQAGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2C 554869.1 3 6 88.1 626.31 HUMAN 1 -6.2014 28.1042 RGQVIIISDSDDDDD-p Q7Z333-4;S1017-p RGQVIIISDSDDDDD 0.732651492896551 0.103308347769127 0.0493333333333333 0.226666666666667 2.55805289760866 13.0221717716064 0.0493333333333333 0.226666666666667 0.554874427877308 0.0498635073214172 0.629123941184083 2.51368095310793 Q7Z333 SETX Q7Z333.4.S1017.p_SETX Q7Z333-4_S1017s _1_1_1017_1017 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25443.25443.3 11.99 11.99 1.413 3 1 1 0 1005.1702 2933.5355 S1017s TMT10 1011 (R) GQVIIIsDSDDDDDERILSLEK (L) GQVIIIS(0.99)DS(0.0)DDDDDERILS(0.0)LEK K:TMT10,s:Phosphorylated S SETX 310728.6 3 9 192.1 463.82 HUMAN 1 2.5581 13.0222 RGQVKKGSVSHDTVQ-p Q96D71;S143-p RGQVKKGSVSHDTVQ 0.32809450446442 0.0104377289471877 -0.266 0.736333333333333 9.05125057670789 27.8093656162138 -0.266 0.736333333333334 0.124415629800255 0.00165601184320383 -1.81723510146216 5.78403485499019 Q96D71 REPS1 Q96D71.S143.p_REPS1 Q96D71_S143s _1_1_143_143 Q96D71 Q96D71|Q96D71-3|Q96D71-4|E9PMG1 RalBP1-associated Eps domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4549.4549.3 14.61 14.61 1.775 3 1 1 0 616.9965 1769.007 S143s TMT10 141 (K) KGsVSHDTVQPR (T) KGS(0.99)VS(0.0)HDT(0.0)VQPR K:TMT10,s:Phosphorylated S REPS1 86831.7 1 19 226.1 425.21 HUMAN 1 -9.0513 27.8094 RGQYYGGSLPNVNQI-p Q6UUV9-2;S64-p RGQYYGGSLPNVNQI 0.772184255224755 0.134683018480393 0.044 0.172333333333333 2.14640172674162 11.4761078520605 0.044 0.172333333333333 0.610042127967787 0.0711851189033797 0.540985075039774 2.23868003637717 Q6UUV9 CRTC1 Q6UUV9.2.S64.p_CRTC1 Q6UUV9-2_S64s_1_1_64_64 Q6UUV9-2 Q6UUV9-2 Isoform 2 of CREB-regulated transcription coactivator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37905.37905.4 24.99 22.65 1.23 12 1 1 0 1403.4301 5529.7474 S64s N69n TMT10 58 (R) GQYYGGsLPNVnQIGSGTMDLPFQPSGFLGEALAAAPVSLTPFQSSGLDTSR (T) GQY(0.0)Y(0.0)GGS(0.99)LPN(0.0)VN(0.99)QIGS(0.0)GT(0.0)MDLPFQPS(0.0)GFLGEALAAAPVS(0.0)LT(0.0)PFQS(0.0)S(0.0)GLDT(0.0)S(0.0)R s:Phosphorylated S,n:Deamidated CRTC1 68894.4 2 7 1799.2 114.19 HUMAN 1 2.1464 11.4761 RGRASSHSSQTQGGG-p P02545;S406-p RGRASSHSSQTQGGG 0.0144292492620541 0.0010212605030329 -0.913666666666667 -1.23633333333333 44.1536620552243 51.7586953453761 -0.913666666666667 -1.23633333333333 3.84267623490122e-05 6.67007113278374e-06 -12.1993024412582 -16.931361675142 P02545 LMNA P02545.S406.p_LMNA P02545_S406sS407s_2_2_406_407 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5753.5753.2 11.1 11.1 1.301 7 2 2 0 1068.9907 1977.0402 S406s S407s TMT10 402 (R) ASSHssQTQGGGSVTK (K) AS(0.0)S(0.0)HS(0.99)S(0.99)QT(0.0)QGGGS(0.0)VT(0.0)K K:TMT10,s:Phosphorylated S LMNA 74423.5 63 41 60.1 706.83 HUMAN 1 -44.1537 -51.7587 RGRGCNESFRAAIDK-p Q8TEW0;S924-p RGRGCNESFRAAIDK 0.182735755275441 0.729961018828838 0.261666666666667 0.0373333333333334 14.5121414508709 1.88435740519555 0.261666666666667 0.0373333333333334 0.0353822832523036 0.647983965776792 2.78744379611297 0.48298217177951 Q8TEW0 PARD3 Q8TEW0.S924.p_PARD3 Q8TEW0_S924s _1_1_924_924 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11|Q8TEW0-4|Q8TEW0-6|Q5VWV2|Q8TEW0-7|Q8TEW0-3|Q8TEW0-5|Q8TEW8|Q8TEW8-2|Q8TEW8-5|A0A087X1S9|Q8TEW0-8|A0A087WZG6|Q5VWU8|Q8TEW0-10|Q8TEW0-9|R4GN62|F5GZI3 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11319.11319.3 9.11 9.11 99 1 1 1 0 559.594 1596.8002 S924s Hydrogen 920 (R) GCNEsFRAAIDK (S) GCNES(1.0)FRAAIDK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S PARD3 151933.9 4 19 65.1 692.2 HUMAN 1 14.5121 1.8844 RGRGRAGSQGGRGGG-p Q86V81;S34-p RGRGRAGSQGGRGGG 0.146270525101547 0.0525507598724914 -0.678666666666667 -0.963666666666667 17.0042857069765 17.0688036053552 -0.678666666666667 -0.963666666666667 0.019932943204026 0.0196390121792406 -3.26347895768546 -3.27369141663883 Q86V81 ALYREF Q86V81.S34.p_ALYREF Q86V81_S34s _1_1_34_34 Q86V81 Q86V81 THO complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3320.3320.3 9.9 5.17 99 1 1 1 0 560.9424 1600.8465 S34s TMT10 32 (R) AGsQGGRGGGAQAAAR (V) AGS(1.0)QGGRGGGAQAAAR s:Phosphorylated S ALYREF 26887.4 1 2 2379.1 85.93 HUMAN 1 -17.0043 -17.0688 RGRGRRTSEEDTPKK-p A0A1B0GW41;S150-p RGRGRRTSEEDTPKK 0.554769935256136 0.356455256345275 0.092 -0.0963333333333333 4.72443143389106 5.94264010654463 0.092 -0.0963333333333334 0.336943324525573 0.254528248714979 1.05330784774495 -1.27403827183427 A0A1B0GW41 NotFound A0A1B0GW41.S150.p_NotFound A0A1B0GW41_S150s _1_1_150_150 A0A1B0GW41 A0A1B0GW41|Q8WYH8 Inhibitor of growth protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3960.3960.4 9.62 5.16 1.148 3 1 1 0 432.9792 1648.927 S150s Hydrogen 148 (R) RTsEEDTPKK (K) RT(0.0)S(0.99)EEDT(0.0)PKK K:TMT10-Lys-Only,s:Phosphorylated S ING5 28803.1 2 3 2243.1 92 HUMAN 1 4.7244 -5.9426 RGRIAEPSVCGRCHT-p P33991;S326-p RGRIAEPSVCGRCHT 0.882937902515112 0.225592060600986 0.0243333333333333 -0.166 1.06684093392399 8.51784121858904 0.0243333333333333 -0.166 0.782196568930873 0.140674661286161 0.29056174511825 -1.72431158652744 P33991 MCM4 P33991.S326.p_MCM4 P33991_S326s _1_1_326_326 P33991 P33991 DNA replication licensing factor MCM4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10276.10276.2 12.86 12.86 99 1 1 1 0 649.3107 1217.651 S326s TMT10 322 (R) IAEPsVCGR (C) IAEPS(1.0)VCGR C:Carbamidomethylation,s:Phosphorylated S MCM4 97126.8 2 7 1487.1 137.87 HUMAN 1 1.0668 -8.5178 RGRKRFVSEGDGGRL-p Q53EL6;S457-p RGRKRFVSEGDGGRL 0.0768119094193664 0.0353657867117229 -0.528 -0.279333333333333 23.8750274800212 19.5380295179373 -0.528 -0.279333333333333 0.00409729517238251 0.0111223625694157 -4.76438309892769 -3.77706984937497 Q53EL6 PDCD4 Q53EL6.S457.p_PDCD4 Q53EL6_S457s _1_1_457_457 Q53EL6 Q53EL6|Q53EL6-2 Programmed cell death protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9443.9648.2 13.3 6.6 99 1 1 1 0 616.7798 1152.5847 S457s TMT10 455 (R) FVsEGDGGR (L) FVS(1.0)EGDGGR s:Phosphorylated S PDCD4 52133.7 15 13 476.1 301.17 HUMAN 1 -23.875 -19.538 RGRLRLLSFRSMEEA-p O43149;S1537-p RGRLRLLSFRSMEEA 0.0118555182322253 0.00159168462790637 -1.22233333333333 -1.22233333333333 46.0323654457917 44.8963214852194 -1.22233333333333 -1.22233333333333 2.49323638090083e-05 3.23867859885955e-05 -13.2451548622015 -12.5691733524997 O43149 ZZEF1 O43149.S1537.p_ZZEF1 O43149_S1537sS1540s_2_2_1537_1540 O43149 O43149 Zinc finger ZZ-type and EF-hand domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24065.24065.3 8.51 8.51 99 2 2 2 0 576.5988 1567.8464 S1537s S1540s TMT10 1535 (R) LLsFRsMEEAR (L) LLS(1.0)FRS(1.0)MEEAR s:Phosphorylated S ZZEF1 335976 1 13 1481.1 138.54 HUMAN 1 -46.0324 -44.8963 RGRNSATSADEQPHI-p E9PC69;S43-p RGRNSATSADEQPHI 0.872044122053662 0.0519260893065422 -0.0323333333333333 -0.243 1.16401452370775 17.144724804803 -0.0323333333333333 -0.243 0.764889233054641 0.0192986762037603 -0.314528413316072 -3.28866151475165 E9PC69 NotFound E9PC69.S43.p_NotFound E9PC69_S43s _1_1_43_43 E9PC69 Q7KZI7|Q7KZI7-8|E9PC69|Q7KZI7-11|Q7KZI7-6|Q7KZI7-3|Q7KZI7-14|Q7KZI7-12|Q7KZI7-9|Q7KZI7-4|Q7KZI7-16|Q7KZI7-5|Q7KZI7-15|Q7KZI7-2|E7ETY4|Q7KZI7-7|Q7KZI7-13|Q7KZI7-10 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7939.7939.3 13.9 13.9 1.101 4 1 1 0 690.3146 1988.9623 S43s TMT10 39 (R) NSATsADEQPHIGNYR (L) NS(0.0)AT(0.0)S(0.99)ADEQPHIGNY(0.0)R s:Phosphorylated S MARK2 87089.2 5 2 200.1 451.67 HUMAN 1 -1.164 -17.1447 RGRSECDSSPEPKAL-p Q9UQ35;S1482-p RGRSECDSSPEPKAL 0.430184643956734 0.0713780522378276 0.141833333333333 0.292333333333333 6.7470128577724 15.2410044984166 0.141833333333333 0.292333333333333 0.211494322917311 0.0299157262286222 1.41665235402116 2.92183086399517 Q9UQ35 SRRM2 Q9UQ35.S1482.p_SRRM2 Q9UQ35_S1482sS1483s_2_2_1482_1483 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5090.5090.2 11.61 11.61 3.016 3 2 2 0 762.7796 1364.6201 S1482s S1483s Hydrogen 1478 (R) SECDssPEPK (A) S(0.0)ECDS(0.99)S(0.99)PEPK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 13 211 2.1 3310.34 HUMAN 2 6.747 15.241 RGRYAWASEEDDASS-p Q9UPN4-2;S489-p RGRYAWASEEDDASS 0.761268627373129 0.126377607963521 0.0456666666666667 -0.162333333333333 2.27294270329361 11.844197768963 0.0456666666666667 -0.162333333333333 0.592523704852463 0.0654003726757827 0.568433252687786 -2.30359787382432 Q9UPN4 CEP131 Q9UPN4.2.S489.p_CEP131 Q9UPN4-2_S489s _1_1_489_489 Q9UPN4-2 Q9UPN4-2|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22458.22458.3 18.65 13.69 1.107 5 1 1 0 842.0359 2444.1303 S489s Hydrogen 485 (R) YAWAsEEDDASSLTADNLEK (F) Y(0.0)AWAS(0.99)EEDDAS(0.0)S(0.0)LT(0.0)ADNLEK K:TMT10-Lys-Only,s:Phosphorylated S CEP131 122301.7 7 15 359.1 345.98 HUMAN 1 2.2729 -11.8442 RGSAMQVSPLMFTDK-p P50851;S2496-p RGSAMQVSPLMFTDK 0.137325721125408 0.127073004163705 -0.585666666666667 -0.228 17.6677313435082 11.8102495978267 -0.585666666666667 -0.228 0.0171090882190399 0.0659136012275344 -3.39532996654648 -2.29759758030057 P50851 LRBA P50851.S2496.p_LRBA P50851_S2496s _1_1_2496_2496 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26506.26506.3 11.86 13.01 5.793 3 1 1 0 684.0108 1970.0491 S2496s TMT10 2490 (R) GSAMQVsPLMFTDK (A) GS(0.0)AMQVS(0.99)PLMFT(0.0)DK K:TMT10,s:Phosphorylated S LRBA 321783.7 1 28 74.1 649.16 HUMAN 1 -17.6677 -11.8102 RGSEEYYSFHESDLD-p Q8NAX2;S218-p RGSEEYYSFHESDLD 0.470110243897234 0.0364204913303259 0.111333333333333 0.284666666666667 6.05063581569518 19.35785236149 0.111333333333333 0.284666666666667 0.248276959631671 0.0115935052721987 1.29357892769204 3.73911734617073 Q8NAX2 KDF1 Q8NAX2.S218.p_KDF1 Q8NAX2_S218sS222s_2_2_218_222 Q8NAX2 Q8NAX2 Keratinocyte differentiation factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27447.27447.3 13.36 13.36 3.096 9 2 2 0 1096.0989 3126.3506 S218s S222s TMT10 212 (R) GSEEYYsFHEsDLDLPEMGSGSMSSR (E) GS(0.0)EEY(0.0)Y(0.0)S(0.99)FHES(0.99)DLDLPEMGS(0.0)GS(0.0)MS(0.0)S(0.0)R s:Phosphorylated S KDF1 44496.8 3 7 2331.1 87.55 HUMAN 1 6.0506 19.3579 RGSEGDCSPEDKNSV-p Q9UKJ3;S1081-p RGSEGDCSPEDKNSV 0.220304594594813 0.534739255306803 0.218 0.0586666666666667 12.6482226843844 3.65710710680722 0.218 0.0590716785463074 0.0543472697866339 0.43081348551685 2.44786752553622 0.850855024116116 Q9UKJ3 GPATCH8 Q9UKJ3.S1081.p_GPATCH8 Q9UKJ3_S1081s _1_1_1081_1081 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9194.9194.4 15.63 15.63 3.589 8 1 1 0 997.2331 3905.9502 S1081s TMT10 1060 (K) ATGPPSQNSNIGTGRGSEGDCsPEDKNSVTAK (L) AT(0.0)GPPS(0.0)QNS(0.0)NIGT(0.0)GRGS(0.0)EGDCS(0.99)PEDKNS(0.0)VT(0.0)AK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GPATCH8 165107.3 11 14 231.1 422.52 HUMAN 1 12.6482 3.6571 RGSGGFGSTGKN___-p P33316;S248-p RGSGGFGSTGKN___ 0.481901097526115 0.0616110019365502 0.0943333333333333 -0.402666666666667 5.83254372919166 16.1159335107184 0.0943333333333333 -0.402666666666667 0.261063181952917 0.0244571951510573 1.25467460681007 -3.08828069381497 P33316 DUT P33316.S248.p_DUT P33316_S248s _1_1_248_248 P33316 P33316|H0YNW5|P33316-2|A0A0C4DGL3 Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5933.5933.2 11.17 11.17 1.199 3 1 1 0 639.2906 1197.6061 S248s Hydrogen 242 (R) GSGGFGsTGKN (-) GS(0.0)GGFGS(0.99)T(0.0)GKN K:TMT10-Lys-Only,s:Phosphorylated S DUT 26848 3 6 2301.1 89.12 HUMAN 1 5.8325 -16.1159 RGSGLLGSQPQPVIP-p O95071;S174-p RGSGLLGSQPQPVIP 0.350372223299442 0.645100209529137 -0.214666666666667 -0.0713333333333333 8.46232347556422 2.59579124021274 -0.214666666666667 -0.0713333333333333 0.142484509749727 0.550073693569078 -1.71528237902633 -0.636962531295286 O95071 UBR5 O95071.S174.p_UBR5 O95071_S174s _1_1_174_174 O95071 O95071|O95071-2|E7EMW7 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.37573.37573.4 21.74 21.74 1.5 4 1 1 0 970.2929 3798.1781 S174s TMT10 168 (R) GSGLLGsQPQPVIPASVIPEELISQAQVVLQGK (S) GS(0.0)GLLGS(0.99)QPQPVIPAS(0.0)VIPEELIS(0.0)QAQVVLQGK K:TMT10,s:Phosphorylated S UBR5 312542 4 6 80.1 636.57 HUMAN 1 -8.4623 -2.5958 RGSGRPASLYLARSK-p Q96HP0;S872-p RGSGRPASLYLARSK 0.621295713198345 0.120732779557619 0.12 -0.293333333333333 3.84272287362806 12.1051697841447 0.12 -0.293333333333333 0.41278861690075 0.0615861452006786 0.886944005545378 -2.34981818027054 Q96HP0 DOCK6 Q96HP0.S872.p_DOCK6 Q96HP0_S872s _1_1_872_872 Q96HP0 Q96HP0 Dedicator of cytokinesis protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11246.11246.3 9.49 9.49 3.256 3 1 1 0 519.6098 1476.8484 S872s TMT10 866 (R) GSGRPAsLYLAR (S) GS(0.0)GRPAS(0.99)LY(0.0)LAR s:Phosphorylated S DOCK6 231436.7 1 1 1743.1 118.18 HUMAN 1 3.8427 -12.1052 RGSGVAQSPQQPPPQ-p Q6VY07-2;S28-p RGSGVAQSPQQPPPQ 0.363649608980053 0.0371685007091737 -0.164 -0.258333333333333 8.15591277148006 19.2204419332049 -0.164 -0.258333333333333 0.152900435660142 0.0119661875852581 -1.66219697926422 -3.7103096268464 Q6VY07 PACS1 Q6VY07.2.S28.p_PACS1 Q6VY07-2_S28s _1_1_28_28 Q6VY07-2 Q6VY07-2 Isoform 2 of Phosphofurin acidic cluster sorting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10306.10306.4 22.53 22.53 3.742 3 1 1 0 882.4521 3446.8181 S28s TMT10 22 (R) GSGVAQsPQQPPPQQQQQQPPQQPTPPK (L) GS(0.0)GVAQS(0.99)PQQPPPQQQQQQPPQQPT(0.0)PPK K:TMT10,s:Phosphorylated S PACS1 109968.1 1 1 786.1 225.23 HUMAN 1 -8.1559 -19.2204 RGSLKEASPGASKPG-p Q9C0D6;S871-p RGSLKEASPGASKPG 0.510269140043288 0.00348168899643099 -0.103333333333333 -0.641666666666667 5.39930968620012 36.7429550653413 -0.103333333333333 -0.641666666666667 0.28844899581758 0.000211692023129788 -1.17675644031682 -8.75855294412483 Q9C0D6 FHDC1 Q9C0D6.S871.p_FHDC1 Q9C0D6_S871s _1_1_871_871 Q9C0D6 Q9C0D6 FH2 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4639.4639.3 12.07 7.76 3.434 3 1 1 0 584.9725 1672.9383 S871s TMT10 869 (K) EAsPGASKPGSAR (R) EAS(0.99)PGAS(0.0)KPGS(0.0)AR K:TMT10,s:Phosphorylated S FHDC1 125729.4 1 3 2652.1 75.2 HUMAN 1 -5.3993 -36.743 RGSLSPRSPVSSLQI-p P55197;S689-p RGSLSPRSPVSSLQI 0.337603610474496 0.299236655832636 0.245 0.145333333333333 8.78232937222221 6.91761315808335 0.245 0.145333333333333 0.132363140477387 0.203347428236344 1.77068382388057 1.4461891427043 P55197 MLLT10 P55197.S689.p_MLLT10 P55197_S689s _1_1_689_689 P55197 P55197|P55197-1 Protein AF-10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15905.15905.3 13.53 6.17 2.638 5 1 1 0 631.6777 1813.0493 S689s TMT10 683 (R) GSLSPRsPVSSLQIR (Y) GS(0.0)LS(0.0)PRS(0.99)PVS(0.0)S(0.0)LQIR s:Phosphorylated S MLLT10 114516.6 2 2 3514.1 49.29 HUMAN 1 8.7823 6.9176 RGSMPAYSGNNMDKS-p Q53TN4;S253-p RGSMPAYSGNNMDKS 0.132122654790992 0.00991769079995784 -0.269 0.583333333333333 18.1436410950599 28.1709716762554 -0.269 0.583333333333333 0.0153333090967076 0.00152371180536654 -3.49139399179396 5.88578260270527 Q53TN4 CYBRD1 Q53TN4.S253.p_CYBRD1 Q53TN4_S253s _1_1_253_253 Q53TN4 Q53TN4|Q53TN4-3 Cytochrome b reductase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12922.12922.3 7.54 7.54 3.334 3 1 1 0 637.292 1829.8926 S253s TMT10 247 (R) GSMPAYsGNNMDK (S) GS(0.0)MPAY(0.0)S(0.99)GNNMDK K:TMT10,s:Phosphorylated S CYBRD1 31754.8 1 1 5330.1 20.44 HUMAN 1 -18.1436 28.171 RGSPHYFSPFRPY__-p Q13242;S216-p RGSPHYFSPFRPY__ 0.993752696482329 0.0722474612308692 0.00166666666666666 -0.356666666666667 0.0554105887073694 15.1651807490035 0.00166666666666666 -0.356666666666667 0.987322288361067 0.0304426128828728 0.0166371593209499 -2.90756576349025 Q13242 SRSF9 Q13242.S216.p_SRSF9 Q13242_S216s _1_1_216_216 Q13242 Q13242 Serine/arginine-rich splicing factor 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20451.20657.3 11.58 11.58 1.798 4 1 1 0 588.6105 1683.8481 S216s TMT10 210 (R) GSPHYFsPFRPY (-) GS(0.0)PHY(0.0)FS(0.99)PFRPY(0.0) s:Phosphorylated S SRSF9 25655.9 1 5 2246.1 91.74 HUMAN 1 0.0554 -15.1652 RGSRTRASLPVVRST-p Q5T5P2;S169-p RGSRTRASLPVVRST 0.303533381577792 0.216309379100503 0.176666666666667 0.148 9.69931608389866 8.74812143065217 0.176666666666667 0.148 0.107168805870821 0.133409838040262 1.92951545233979 1.7641471377249 Q5T5P2 KIAA1217 Q5T5P2.S169.p_KIAA1217 Q5T5P2_S169s _1_1_169_169 Q5T5P2 Q5T5P2|Q5T5P2-10|Q5T5P2-7|Q5T5P2-2|Q5T5P2-9 Sickle tail protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14756.14756.2 10 3.22 99 1 1 1 0 525.7997 970.6247 S169s TMT10 168 (R) AsLPVVR (S) AS(1.0)LPVVR s:Phosphorylated S KIAA1217 214739.6 6 3 303.1 376.04 HUMAN 1 9.6993 8.7481 RGSSFRFSGRTQKQV-p A0A1B0GV68;S340-p RGSSFRFSGRTQKQV 0.621051956956043 0.0392359937418978 0.072 0.349 3.84629093711839 18.8777785350565 0.072 0.349 0.412449618551034 0.0129485800646406 0.887631573399222 3.63897711551791 A0A1B0GV68 NotFound A0A1B0GV68.S340.p_NotFound A0A1B0GV68_S340s _1_1_340_340 A0A1B0GV68 Q9Y4F1-2|C9JME2|A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9154.9377.3 11.18 11.18 11.181 3 1 1 0 437.2128 1229.6588 S340s TMT10 334 (R) GSSFRFsGR (T) GS(0.0)S(0.0)FRFS(0.99)GR s:Phosphorylated S FARP1 88555.5 3 5 147.1 514.5 HUMAN 1 3.8463 18.8778 RGSSFRYSGRTQKQL-p O94887;S344-p RGSSFRYSGRTQKQL 0.602695261332663 0.646966272471118 -0.102333333333333 0.068 4.06122299237055 2.57782535415435 -0.102333333333333 0.068 0.392534380425218 0.55235395063236 -0.928814480695787 0.633195357993731 O94887 FARP2 O94887.S344.p_FARP2 O94887_S344s _1_1_344_344 O94887 O94887|Q6ZUT3|Q6ZUT3-2|O94887-2|O94887-3 FERM, ARHGEF and pleckstrin domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5745.5745.3 11.62 11.62 5.607 4 1 1 0 442.545 1245.6538 S344s TMT10 338 (R) GSSFRYsGR (T) GS(0.0)S(0.0)FRY(0.0)S(0.99)GR s:Phosphorylated S FARP2 120799.1 2 2 733.1 235.57 HUMAN 1 -4.0612 2.5778 RGSSLSGSLCSLLES-p Q8IV03;S151-p RGSSLSGSLCSLLES 0.599791356462799 0.46647599671505 -0.0703333333333333 -0.0686666666666666 4.1005504052951 4.41600304937818 -0.0703333333333333 -0.0686666666666666 0.388995842286501 0.361742632768249 -0.936301749429111 -0.995677740961849 Q8IV03 LURAP1L Q8IV03.S151.p_LURAP1L Q8IV03_S151s _1_1_151_151 Q8IV03 Q8IV03 Leucine rich adaptor protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26946.26946.3 13.93 12.79 1.136 9 1 1 0 793.3882 2298.1809 S151s TMT10 145 (R) GSSLSGsLCSLLESQSTSLR (G) GS(0.0)S(0.0)LS(0.0)GS(0.99)LCS(0.0)LLES(0.0)QS(0.0)T(0.0)S(0.0)LR C:Carbamidomethylation,s:Phosphorylated S LURAP1L 24868 1 2 4680.1 28.09 HUMAN 1 -4.1006 -4.416 RGSSRRGSMNNELLS-p O00562;S593-p RGSSRRGSMNNELLS 0.838274783466982 0.908800328941999 0.0506666666666667 0.0116666666666667 1.48362761695578 0.581316312106601 0.0506666666666667 0.0116666666666667 0.710619692391309 0.874718614775571 0.391147522255212 0.165270242079977 O00562 PITPNM1 O00562.S593.p_PITPNM1 O00562_S593s _1_1_593_593 O00562 O00562|O00562-2 Membrane-associated phosphatidylinositol transfer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25993.25993.4 17.55 17.55 9.154 2 1 1 0 848.6742 3311.7004 S593s TMT10 591 (R) RGsMNNELLSPEFGPVRDPLADGVEGLGR (G) RGS(0.99)MNNELLS(0.0)PEFGPVRDPLADGVEGLGR s:Phosphorylated S PITPNM1 135986.3 3 5 1747.1 117.75 HUMAN 1 1.4836 0.5813 RGSSRYSSTETLKDD-p Q96PE2;S395-p RGSSRYSSTETLKDD 0.609681109698794 0.341382972206259 0.134666666666667 -0.115666666666667 3.98075853062683 6.18196048096646 0.134666666666667 -0.115666666666667 0.399874902258339 0.240881780088939 0.913449803700816 -1.31659212857407 Q96PE2 ARHGEF17 Q96PE2.S395.p_ARHGEF17 Q96PE2_S394sS395s_2_2_394_395 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17189.17189.4 8.02 8.02 1.463 9 2 2 0 727.8333 2748.3841 S394s S395s TMT10 389 (R) GSSRYssTETLKDDDLWSSR (G) GS(0.0)S(0.0)RY(0.0)S(0.99)S(0.99)T(0.0)ET(0.0)LKDDDLWS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S ARHGEF17 223779.6 1 43 30.1 908.19 HUMAN 1 3.9808 -6.182 RGSVLQESPVTKSGH-p Q2LD37;S2368-p RGSVLQESPVTKSGH 0.738473983077012 0.00725504179174429 -0.053 -0.492666666666667 2.49790091209902 30.6070329117745 -0.053 -0.492666666666667 0.562613188921314 0.000869554303559181 -0.616445647284032 -6.6082074810105 Q2LD37 KIAA1109 Q2LD37.S2368.p_KIAA1109 Q2LD37_S2368s _1_1_2368_2368 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7|Q2LD37-6|Q2LD37-2 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14321.14321.2 12.96 9.01 2.786 3 1 1 0 841.9606 1602.9467 S2368s TMT10 2362 (R) GSVLQEsPVTK (S) GS(0.0)VLQES(0.99)PVT(0.0)K K:TMT10,s:Phosphorylated S KIAA1109 559693.9 2 14 143.1 520.8 HUMAN 1 -2.4979 -30.607 RGSVSSVSPKPPSSF-p Q9NZJ0;S490-p RGSVSSVSPKPPSSF 0.751959847799119 0.000952253650599092 -0.0486666666666667 -1.407 2.3610412777802 56.1601436427034 -0.0486666666666667 -1.407 0.580625188353622 2.42094897263421e-06 -0.587351633470613 -20.4631231310443 Q9NZJ0 DTL Q9NZJ0.S490.p_DTL Q9NZJ0_S490s _1_1_490_490 Q9NZJ0 Q9NZJ0|F5GZ90 Denticleless protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14556.14556.3 16.23 12.59 2.507 6 1 1 0 753.419 2178.2737 S490s TMT10 484 (R) GSVSSVsPKPPSSFK (M) GS(0.0)VS(0.0)S(0.0)VS(0.99)PKPPS(0.0)S(0.0)FK K:TMT10,s:Phosphorylated S DTL 80892.7 8 8 461.1 305.23 HUMAN 1 -2.361 -56.1601 RGSWDCSSPEGNGSP-p Q9UN79;S77-p RGSWDCSSPEGNGSP 0.431693145064168 0.183970635400432 0.118666666666667 0.168333333333333 6.71713204541791 9.6670647874601 0.118666666666667 0.168333333333333 0.212954487131147 0.10796761831191 1.41140203785128 1.92317305010949 Q9UN79 SOX13 Q9UN79.S77.p_SOX13 Q9UN79_S76sS77sS83s_3_3_76_83 Q9UN79 Q9UN79 Transcription factor SOX-13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14110.14110.5 8.87 8.83 2.537 7 3 3 0 821.3615 3861.8917 S76s S77s N81n S83s TMT10 71 (R) GSWDCssPEGnGsPEPKRPGVSEAASGSQEK (L) GS(0.0)WDCS(0.99)S(0.99)PEGN(1.0)GS(0.99)PEPKRPGVS(0.0)EAAS(0.0)GS(0.0)QEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated SOX13 69740.6 2 15 1036.1 185.73 HUMAN 1 6.7171 9.6671 RGTAQYSSQKSVEER-p Q99959;S132-p RGTAQYSSQKSVEER 0.201147832961288 0.0243936061397655 0.277666666666667 0.296 13.5321325255467 21.9650791554156 0.277666666666667 0.296 0.0443390871294787 0.00636051211929922 2.60741104845991 4.30940063611852 Q99959 PKP2 Q99959.S132.p_PKP2 Q99959_S132sS135s_2_2_132_135 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7275.7275.2 9.64 9.64 1.185 5 2 2 0 1094.5086 2028.0762 S132s S135s TMT10 126 (R) GTAQYSsQKsVEER (S) GT(0.0)AQY(0.0)S(0.0)S(0.99)QKS(0.99)VEER K:TMT10,s:Phosphorylated S PKP2 97926.6 1 22 257.1 399.17 HUMAN 1 13.5321 21.9651 RGTHLPESPKLEDFY-p Q9ULD4;S713-p RGTHLPESPKLEDFY 0.305563538975379 0.250441300337034 0.167666666666667 -0.157666666666667 9.65401736782546 7.92290998273795 0.167666666666667 -0.157666666666667 0.108292470932644 0.161327722095444 1.92165905047484 -1.62127597374758 Q9ULD4 BRPF3 Q9ULD4.S713.p_BRPF3 Q9ULD4_S713s _1_1_713_713 Q9ULD4 Q9ULD4|E9PI60|Q9ULD4-2|Q9ULD4-3|E9PSF3 Bromodomain and PHD finger-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17648.17648.4 14.72 14.72 4.273 3 1 1 0 582.5515 2247.2174 S713s TMT10 707 (R) GTHLPEsPKLEDFYR (F) GT(0.0)HLPES(0.99)PKLEDFY(0.0)R K:TMT10,s:Phosphorylated S BRPF3 137397.1 4 3 1814.1 113.02 HUMAN 1 9.654 -7.9229 RGTIEILSDVQLIKT-p P05388;S156-p RGTIEILSDVQLIKT 0.541997271647713 0.87633884012908 -0.136666666666667 0.0173333333333333 4.90789145578546 0.806052513270989 -0.136666666666667 0.0173333333333333 0.323006196926537 0.830605396976145 -1.08715138641466 0.224473678903607 P05388 RPLP0 P05388.S156.p_RPLP0 P05388_S156s _1_1_156_156 P05388 P05388|Q8NHW5 60S acidic ribosomal protein P0 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.32733.32733.3 11.53 11.5 7.726 2 1 1 0 656.3784 1887.1567 S156s TMT10 150 (R) GTIEILsDVQLIK (T) GT(0.0)IEILS(0.99)DVQLIK K:TMT10,s:Phosphorylated S RPLP0 34444.1 1 2 2659.1 74.88 HUMAN 1 -4.9079 0.8061 RGTKRRASWASENGE-p Q12789;S1865-p RGTKRRASWASENGE 0.199418709267342 0.0041396896068766 -0.287333333333333 0.623666666666667 13.6191211075142 35.0651751112567 -0.287333333333333 0.623666666666667 0.0434598165978645 0.000311517528690437 -2.62325060830441 8.11823780802928 Q12789 GTF3C1 Q12789.S1865.p_GTF3C1 Q12789_S1865s _1_1_1865_1865 Q12789 Q12789|Q12789-3 General transcription factor 3C polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9297.9297.5 11.7 11.7 1.143 5 1 1 0 607.0917 2951.4682 S1865s TMT10 1862 (K) RRAsWASENGETDAEGTQMTPAK (R) RRAS(0.99)WAS(0.0)ENGET(0.0)DAEGT(0.0)QMT(0.0)PAK K:TMT10,s:Phosphorylated S GTF3C1 241209.8 8 12 225.1 425.73 HUMAN 1 -13.6191 35.0652 RGTLGRNTPYKTLEP-p Q8IZP0-9;T196-p RGTLGRNTPYKTLEP 0.27306154975907 0.0132156475940278 0.242333333333333 -0.631666666666667 10.6761905324688 26.1550419759 0.242333333333333 -0.631666666666667 0.0855817074228244 0.00242379453772027 2.09947263226184 -5.33532467585889 Q8IZP0 ABI1 Q8IZP0.9.T196.p_ABI1 Q8IZP0-9_T196t _1_1_196_196 Q8IZP0-9 Q8IZP0|Q8IZP0-12|Q8IZP0-2|Q8IZP0-7|Q8IZP0-8|B6VEX4|Q8IZP0-10|Q8IZP0-11|Q8IZP0-9|Q8IZP0-6|Q8IZP0-5|A0A0A0MRT6|Q8IZP0-3|Q8IZP0-4 Isoform 9 of Abl interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8229.8229.3 7.63 4.3 2.647 3 1 1 0 548.9687 1564.9211 T196t TMT10 190 (R) GTLGRNtPYK (T) GT(0.0)LGRNT(0.99)PY(0.0)K K:TMT10,t:Phosphorylated T ABI1 52580.9 1 2 1517.1 134.48 HUMAN 1 10.6762 -26.155 RGVAPADSPEAPRRS-p Q9P2G1;S737-p RGVAPADSPEAPRRS 0.74843463214063 0.501196022401641 0.0573333333333333 0.084 2.39260181158324 4.01563238671119 0.0573333333333333 0.084 0.576421032282809 0.396676763662008 0.594092178998266 0.919960305874048 Q9P2G1 ANKIB1 Q9P2G1.S737.p_ANKIB1 Q9P2G1_S737s _1_1_737_737 Q9P2G1 Q9P2G1 Ankyrin repeat and IBR domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7715.7715.3 18.08 16.68 99 1 1 1 0 492.5742 1395.743 S737s TMT10 731 (R) GVAPADsPEAPR (R) GVAPADS(1.0)PEAPR s:Phosphorylated S ANKIB1 124110.4 7 7 1291.1 157.55 HUMAN 1 2.3926 4.0156 RGVISYQTLPRNMPS-p Q9HAU0-6;T444-p RGVISYQTLPRNMPS 0.375395644744899 0.124770343712304 0.157666666666667 0.195333333333333 7.87225956417667 11.9214931302657 0.157666666666667 0.195333333333333 0.163220251828372 0.0642466795435655 1.61299298729533 2.3172700403519 Q9HAU0 PLEKHA5 Q9HAU0.6.T444.p_PLEKHA5 Q9HAU0-6_T444t _1_1_444_444 Q9HAU0-6 Q9HAU0-6|Q9HAU0-4|Q9HAU0-2|Q9HAU0-8|Q9HAU0-5|A0JP02|Q9HAU0-3 Isoform 6 of Pleckstrin homology domain-containing family A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17532.17532.2 13.47 13.47 3.813 3 1 1 0 721.8838 1362.7943 T444t TMT10 438 (R) GVISYQtLPR (N) GVIS(0.0)Y(0.0)QT(0.99)LPR t:Phosphorylated T PLEKHA5 147692.6 4 6 374.1 338.83 HUMAN 1 7.8723 11.9215 RGVKRSASPDYNRTN-p Q14669-3;S119-p RGVKRSASPDYNRTN 0.453195332145344 0.353922171982899 -0.213666666666667 0.147 6.34212487569528 5.98197346735208 -0.213666666666667 0.147 0.232160062724531 0.252233434400397 -1.34528936029718 1.28104773160725 Q14669 TRIP12 Q14669.3.S119.p_TRIP12 Q14669-3_S119s _1_1_119_119 Q14669-3 Q14669-3|Q14669-2|G5E9G6 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5442.5442.2 11.79 11.79 2.21 7 1 1 0 1110.5402 2140.1035 S119s TMT10 117 (R) SAsPDYNRTNSPSSAK (K) S(0.0)AS(0.99)PDY(0.0)NRT(0.0)NS(0.0)PS(0.0)S(0.0)AK K:TMT10,s:Phosphorylated S TRIP12 227456.1 11 2 234.1 420.47 HUMAN 1 -6.3421 5.982 RGVLHTFSPSPKLQN-p Q86YP4-3;S547-p RGVLHTFSPSPKLQN 0.432139015890412 0.00107644966075265 -0.172333333333333 -1.11033333333333 6.70898694191555 50.1329440700375 -0.172333333333333 -1.11033333333333 0.213354253642632 9.69852284223296e-06 -1.40997045443106 -15.7827370226464 Q86YP4 GATAD2A Q86YP4.3.S547.p_GATAD2A Q86YP4-3_S547s _1_1_547_547 Q86YP4-3 Q86YP4-3 Isoform 3 of Transcriptional repressor p66-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15817.15817.3 14.41 14.41 1.34 3 1 1 0 569.9799 1627.9572 S547s TMT10 541 (R) GVLHTFsPSPK (L) GVLHT(0.0)FS(0.99)PS(0.0)PK K:TMT10,s:Phosphorylated S GATAD2A 68475 1 11 1046.1 184.48 HUMAN 1 -6.709 -50.1329 RGYRDDRSPAREPGD-p B3KU38;S193-p RGYRDDRSPAREPGD 0.925681602029791 0.15952262667856 0.0163333333333333 -0.321333333333333 0.661987312653203 10.485135692176 0.0163333333333333 -0.321333333333333 0.858620530577816 0.0894306589532182 0.186801120636142 -2.0652545325035 B3KU38 IQCJ-SCHIP1 B3KU38.S193.p_IQCJ-SCHIP1 B3KU38_S193s _1_1_193_193 B3KU38 B3KU38|B3KU38-2|P0DPB3|P0DPB3-2|C9J366 IQCJ-SCHIP1 readthrough transcript protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3628.3628.4 18.54 18.54 6.494 3 1 1 0 521.7386 2003.9642 S193s Hydrogen 187 (R) GYRDDRsPAREPGDVSAR (T) GY(0.0)RDDRS(0.99)PAREPGDVS(0.0)AR s:Phosphorylated S IQCJ-SCHIP1 62703.3 3 2 4213.1 35.35 HUMAN 1 0.662 -10.4851 RHAAKAISPEGEDRF-p A7KAX9;S1820-p RHAAKAISPEGEDRF 0.833410479125805 0.0303477654130301 -0.0313333333333333 -0.322 1.52599110639312 20.5239561520966 -0.0313333333333334 -0.322 0.70372161282187 0.0088634823616732 -0.401068105295551 -3.98845263766922 A7KAX9 ARHGAP32 A7KAX9.S1820.p_ARHGAP32 A7KAX9_S1820s _1_1_1820_1820 A7KAX9 A7KAX9 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12490.12490.3 8.71 8.71 8.711 2 1 1 0 583.6115 1668.8543 S1820s TMT10 1818 (K) AIsPEGEDRFYR (R) AIS(0.99)PEGEDRFY(0.0)R s:Phosphorylated S ARHGAP32 232236.5 1 27 159.1 497.4 HUMAN 1 -1.526 -20.524 RHAELSGSPLKSKST-p Q9BTC8;S519-p RHAELSGSPLKSKST 0.873798109188382 0.0711978668918399 0.0273333333333333 -0.603 1.14664338158614 15.2571390702053 0.0273333333333333 -0.603 0.767954804600858 0.029804791837572 0.310268400238021 -2.92486952678724 Q9BTC8 MTA3 Q9BTC8.S519.p_MTA3 Q9BTC8_S519s _1_1_519_519 Q9BTC8 Q9BTC8|E7EV10|D6W5A2 Metastasis-associated protein MTA3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10742.10742.4 16.29 10.45 2.704 3 1 1 0 571.2957 2202.1919 S519s TMT10 507 (R) AEYADRHAELSGsPLK (S) AEY(0.0)ADRHAELS(0.0)GS(0.99)PLK K:TMT10,s:Phosphorylated S MTA3 68244.2 2 7 1441.1 142.09 HUMAN 1 1.1466 -15.2571 RHAEPGFSLKRPRGL-p Q99640;S40-p RHAEPGFSLKRPRGL 0.29821012666005 0.080184744405213 -0.316333333333333 -0.369333333333333 9.88236438706118 14.5433932528444 -0.316333333333333 -0.369333333333333 0.102745677756758 0.0351285864727487 -1.96128019646081 -2.79149083238997 Q99640 PKMYT1 Q99640.S40.p_PKMYT1 Q99640_S40s _1_1_40_40 Q99640 B4DZM6|Q99640|Q99640-3 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13295.13295.3 14.15 14.15 99 1 1 1 0 508.6061 1443.836 S40s TMT10 34 (R) HAEPGFsLK (R) HAEPGFS(1.0)LK K:TMT10,s:Phosphorylated S PKMYT1 55090.9 1 2 926.1 199.78 HUMAN 1 -9.8824 -14.5434 RHALYPPSPRKHAEP-p X6RAB3;S608-p RHALYPPSPRKHAEP 0.781374547736925 0.0837074528781429 -0.0406666666666667 -0.207333333333333 2.05829917498879 14.2615929903882 -0.0406666666666667 -0.207333333333333 0.622544044004615 0.0374835487522917 -0.52167444829352 -2.73939445693134 X6RAB3 NotFound X6RAB3.S608.p_NotFound X6RAB3_S608s _1_1_608_608 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8044.8365.3 10.44 10.44 5.993 2 1 1 0 449.5654 1266.7156 S608s TMT10 602 (R) HALYPPsPR (K) HALY(0.0)PPS(0.99)PR s:Phosphorylated S USP6NL 96835.5 6 9 364.1 342.41 HUMAN 1 -2.0583 -14.2616 RHAPHCLSEEEGEQD-p A0A0J9YX62;S277-p RHAPHCLSEEEGEQD 0.572570864246015 0.346289024344032 0.08 0.117333333333333 4.46059484127899 6.10439493748807 0.08 0.117333333333333 0.358047392971418 0.245222607609057 1.0042107788908 1.30282439501312 A0A0J9YX62 NotFound A0A0J9YX62.S277.p_NotFound A0A0J9YX62_S277s _1_1_277_277 A0A0J9YX62 A0A0J9YX62|O75190|O75190-3|O75190-4|E9PH18 DnaJ homolog subfamily B member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4976.4976.4 22.42 22.42 99 1 1 1 0 589.7646 2276.0676 S277s TMT10 271 (R) HAPHCLsEEEGEQDRPR (A) HAPHCLS(1.0)EEEGEQDRPR C:Carbamidomethylation,s:Phosphorylated S DNAJB6 36828 5 1 4220.1 35.16 HUMAN 1 4.4606 6.1044 RHDEESHSLSPPGEN-p Q96JQ2;S524-p RHDEESHSLSPPGEN 0.560423836734948 0.335488706397659 -0.0806666666666667 0.0953333333333334 4.63662047345058 6.28715705215697 -0.0806666666666667 0.0953333333333334 0.343825396629025 0.235117142441907 -1.03702516360385 1.33522920653611 Q96JQ2 CLMN Q96JQ2.S524.p_CLMN Q96JQ2_S524sS526s_2_2_524_526 Q96JQ2 Q96JQ2 Calmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21477.21477.3 14.14 14.14 1.146 5 2 2 0 1015.442 2884.3621 S524s S526s Hydrogen 518 (R) HDEESHsLsPPGENTVMADSFQIK (V) HDEES(0.0)HS(0.99)LS(0.99)PPGENT(0.0)VMADS(0.0)FQIK K:TMT10-Lys-Only,s:Phosphorylated S CLMN 112105.2 2 15 726.1 236.61 HUMAN 1 -4.6366 6.2872 RHDSPDPSPPRRARH-p Q9BRD0;S226-p RHDSPDPSPPRRARH 0.524824849913072 0.3652549307974 0.0953333333333333 0.122 5.18165762260191 5.79792366539219 0.0953333333333334 0.122 0.30327334243832 0.263152580713495 1.13724600028588 1.24819280835407 Q9BRD0 BUD13 Q9BRD0.S226.p_BUD13 Q9BRD0_S222sS226s_2_2_222_226 Q9BRD0 Q9BRD0 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3292.3292.4 14.73 14.73 99 2 2 2 0 419.6829 1515.7775 S222s S226s Hydrogen 218 (R) VRHDsPDPsPPRR (A) VRHDS(1.0)PDPS(1.0)PPRR s:Phosphorylated S BUD13 70576.6 11 28 171.1 490.08 HUMAN 1 5.1817 5.7979 RHDSPDPSPPRRPQH-p Q9BRD0;S201-p RHDSPDPSPPRRPQH 0.691847298094592 0.842830326093416 0.0866666666666667 0.04 3.00013870827266 1.04301826813081 0.0866666666666667 0.0399999999999999 0.501171226584081 0.786498997128164 0.72044047173505 0.284606370679748 Q9BRD0 BUD13 Q9BRD0.S201.p_BUD13 Q9BRD0_S197sS201s_2_2_197_201 Q9BRD0 Q9BRD0|Q9BRD0-2 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4528.4528.2 11.34 11.34 99 2 2 2 0 747.3049 1333.6698 S197s S201s TMT10 195 (R) HDsPDPsPPR (R) HDS(1.0)PDPS(1.0)PPR s:Phosphorylated S BUD13 70576.6 5 27 171.1 490.08 HUMAN 1 3.0001 1.043 RHDSRRNTLEWCLPV-p B0YIW6;T478-p RHDSRRNTLEWCLPV 0.412904330240318 0.122952151021574 -0.115333333333333 0.163 7.08721896588511 12.0077679469888 -0.115333333333333 0.163 0.195559133105663 0.0629829800209978 -1.47627196204532 2.33254774220713 B0YIW6 NotFound B0YIW6.T478.p_NotFound B0YIW6_T478t _1_1_478_478 B0YIW6 B0YIW6|P48444|P48444-2 Archain 1, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27258.27258.3 10.58 10.58 99 1 1 1 0 751.7334 2173.2204 T478t TMT10 476 (R) RNtLEWCLPVIDAK (N) RNT(1.0)LEWCLPVIDAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ARCN1 62195.8 1 6 1797.1 114.24 HUMAN 1 -7.0872 12.0078 RHDTPDPSPLRGARH-p Q9BRD0;S163-p RHDTPDPSPLRGARH 0.626930677300059 0.274918692010714 0.104 0.21 3.76771493458702 7.38961382332751 0.104 0.21 0.419979900709622 0.182405789118433 0.872459280035671 1.5286091732426 Q9BRD0 BUD13 Q9BRD0.S163.p_BUD13 Q9BRD0_T159tS163s_2_2_159_163 Q9BRD0 Q9BRD0|Q9BRD0-2 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3639.3639.3 15.56 15.56 99 2 2 2 0 507.8798 1361.692 T159t S163s Hydrogen 155 (R) ARHDtPDPsPLR (G) ARHDT(1.0)PDPS(1.0)PLR t:Phosphorylated T,s:Phosphorylated S BUD13 70576.6 18 25 171.1 490.08 HUMAN 1 3.7677 7.3896 RHDTPDPSPRRARHD-p Q9BRD0;S151-p RHDTPDPSPRRARHD 0.0702054773069024 0.332052623829058 0.426 -0.13 24.890959402001 6.34383769993977 0.426 -0.13 0.00324267975244098 0.232068518623472 5.01621305247762 -1.34525492097966 Q9BRD0 BUD13 Q9BRD0.S151.p_BUD13 Q9BRD0_T147tS151s_2_2_147_151 Q9BRD0 Q9BRD0|Q9BRD0-2 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3580.3580.4 11.13 11.13 99 2 2 2 0 510.4936 1879.0186 T147t S151s TMT10 142 (R) KDRHDtPDPsPR (R) KDRHDT(1.0)PDPS(1.0)PR K:TMT10,t:Phosphorylated T,s:Phosphorylated S BUD13 70576.6 7 24 171.1 490.08 HUMAN 1 24.891 -6.3438 RHFKRILSLLEGQKI-p P51648-2;S293-p RHFKRILSLLEGQKI 0.873037239741277 0.513304242410888 -0.024 0.065 1.15412947285184 3.88623172030468 -0.024 0.065 0.766632193336392 0.408673830020504 -0.31210553283298 0.895170807891228 P51648 ALDH3A2 P51648.2.S293.p_ALDH3A2 P51648-2_S293s _1_1_293_293 P51648-2 P51648-2|J3QRD1 Isoform 2 of Fatty aldehyde dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33216.33216.3 10.19 10.19 99 1 1 1 0 513.6376 1458.9296 S293s TMT10 291 (R) ILsLLEGQK (I) ILS(1.0)LLEGQK K:TMT10,s:Phosphorylated S ALDH3A2 58124.7 5 2 4612.1 28.82 HUMAN 1 -1.1541 3.8862 RHGGAGGSPSVTWAR-p Q9NZM4;S1256-p RHGGAGGSPSVTWAR 0.814817468336303 0.176245700206584 0.051 0.161666666666667 1.70688921617223 9.91414941876177 0.051 0.161666666666667 0.675011354712331 0.101996450417111 0.442865602152744 1.96601170469156 Q9NZM4 GLTSCR1 Q9NZM4.S1256.p_GLTSCR1 Q9NZM4_S1256s _1_1_1256_1256 Q9NZM4 Q9NZM4|A0A087WWH3|Q9NZM4-2 BRD4-interacting chromatin-remodeling complex-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7758.7758.3 16.25 16.25 3.22 3 1 1 0 550.265 1568.8131 S1256s TMT10 1250 (R) HGGAGGsPSVTWAR (A) HGGAGGS(0.99)PS(0.0)VT(0.0)WAR s:Phosphorylated S BICRA 158829.7 1 4 2101.1 97.63 HUMAN 1 1.7069 9.9141 RHGGRDCSPTCWEQG-p Q86YV5;S285-p RHGGRDCSPTCWEQG 0.53706412572523 0.289003105354673 -0.0886666666666667 -0.105 4.99272769390562 7.11230613652829 -0.0886666666666667 -0.105 0.316757736283814 0.194432735493097 -1.10272524228639 -1.48024228854337 Q86YV5 SGK223 Q86YV5.S285.p_SGK223 Q86YV5_S285s _1_1_285_285 Q86YV5 Q86YV5 Tyrosine-protein kinase PRAG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6970.6970.3 9.68 9.68 1.23 2 1 1 0 771.6822 2233.0643 S285s TMT10 279 (R) HGGRDCsPTCWEQGK (C) HGGRDCS(0.99)PT(0.0)CWEQGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRAG1 152359.5 4 3 223.1 426.19 HUMAN 1 -4.9927 -7.1123 RHGSGADSDYENTQS-p Q9Y2X7;S596-p RHGSGADSDYENTQS 0.706540552407433 0.341682876478045 -0.074 0.098 2.83539797785075 6.17685198462431 -0.074 0.098 0.52054730481298 0.241165289955256 -0.686776774324665 1.3156860691489 Q9Y2X7 GIT1 Q9Y2X7.S596.p_GIT1 Q9Y2X7_S596s _1_1_596_596 Q9Y2X7 Q9Y2X7-3|A0A0C4DGN6 ARF GTPase-activating protein GIT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16498.16498.4 16.14 15.59 2.11 5 1 1 0 786.1273 3061.5227 S596s TMT10 590 (R) HGSGADsDYENTQSGDPLLGLEGKR (F) HGS(0.0)GADS(0.99)DY(0.0)ENT(0.0)QS(0.0)GDPLLGLEGKR K:TMT10,s:Phosphorylated S GIT1 85081.2 3 31 474.2 301.74 HUMAN 1 -2.8354 6.1769 RHGTPDPSPRKDRHD-p Q9BRD0;S139-p RHGTPDPSPRKDRHD 0.548049797648108 0.991427477468661 -0.111 0.00133333333333335 4.81974496038351 0.0553204757017201 -0.111 0.00133333333333336 0.32962906908998 0.987342774806486 -1.07091950285547 0.0166087566394259 Q9BRD0 BUD13 Q9BRD0.S139.p_BUD13 Q9BRD0_T135tS139s_2_2_135_139 Q9BRD0 Q9BRD0|Q9BRD0-2 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4618.4618.4 8.61 8.61 99 2 2 2 0 428.2103 1549.8851 T135t S139s TMT10 133 (R) HGtPDPsPRK (D) HGT(1.0)PDPS(1.0)PRK K:TMT10,t:Phosphorylated T,s:Phosphorylated S BUD13 70576.6 4 23 171.1 490.08 HUMAN 1 -4.8197 0.0553 RHGVLRHSVDLIGRP-p Q96FX7;S46-p RHGVLRHSVDLIGRP 0.545982282559946 0.820265340775282 -0.107 0.028 4.85218715110046 1.20389237697391 -0.107 0.028 0.32717588428536 0.757898002242824 -1.07689971162254 0.324235819181459 Q96FX7 TRMT61A Q96FX7.S46.p_TRMT61A Q96FX7_S46s _1_1_46_46 Q96FX7 Q96FX7 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14041.14041.5 15.77 17.75 9.951 2 1 1 0 503.4839 2433.4243 S46s TMT10 40 (R) HGVLRHsVDLIGRPFGSK (V) HGVLRHS(0.99)VDLIGRPFGS(0.0)K K:TMT10,s:Phosphorylated S TRMT61A 31723.4 2 1 2579.1 77.84 HUMAN 1 -4.8522 1.2039 RHHKREDSFESLDSL-p Q8WWI1-3;S246-p RHHKREDSFESLDSL 0.739247480976757 0.89917859782695 0.0513333333333333 0.0186666666666667 2.48713010765146 0.646712357822163 0.0513333333333334 0.0186666666666667 0.564010240337863 0.861645777750358 0.614168578964888 0.182733141896004 Q8WWI1 LMO7 Q8WWI1.3.S246.p_LMO7 Q8WWI1-3_S246s _1_1_246_246 Q8WWI1-3 Q8WWI1-4|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15205.15205.3 13.85 13.85 2.369 4 1 1 0 636.2969 1826.9082 S246s TMT10 243 (K) REDsFESLDSLGSR (S) REDS(0.99)FES(0.0)LDS(0.0)LGS(0.0)R s:Phosphorylated S LMO7 154694.3 4 3 61.1 704.74 HUMAN 1 2.4871 0.6467 RHIFRRRSAGELPAA-p Q9UQQ2;S150-p RHIFRRRSAGELPAA 0.287218129279298 0.00758498686582333 0.21 -1.16366666666667 10.2140636461002 30.2817066672134 0.21 -1.16366666666667 0.0951905060007961 0.000937193641209765 2.01892639597785 -6.50785033018092 Q9UQQ2 SH2B3 Q9UQQ2.S150.p_SH2B3 Q9UQQ2_S150s _1_1_150_150 Q9UQQ2 Q9UQQ2 SH2B adapter protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12434.12434.4 18.42 16.55 1.134 4 1 1 0 794.9068 3096.6275 S150s Hydrogen 150 (R) sAGELPAAHTAAAPGTPGEAAETPARPGLAK (K) S(0.99)AGELPAAHT(0.0)AAAPGT(0.0)PGEAAET(0.0)PARPGLAK K:TMT10-Lys-Only,s:Phosphorylated S SH2B3 63965.7 1 1 5048.1 23.53 HUMAN 1 10.2141 -30.2817 RHKRRMHSQPRSRGR-p J3QR07;S515-p RHKRRMHSQPRSRGR 0.0226893244468939 0.0181749418560776 0.769666666666667 0.330666666666667 38.025515240348 23.9632482192832 0.769666666666667 0.330666666666667 0.000157560908379702 0.00401490411748307 9.29787360536516 4.7802550371277 J3QR07 YTHDC1 J3QR07.S515.p_YTHDC1 J3QR07_S515s _1_1_515_515 J3QR07 J3QR07|Q96MU7|Q96MU7-2 YTH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.2479.2479.3 8.36 3.91 99 1 1 1 0 407.5354 1140.6258 S515s TMT10 512 (R) RMHsQPR (S) RMHS(1.0)QPR s:Phosphorylated S YTHDC1 85871.1 3 14 702.1 239.92 HUMAN 1 38.0255 23.9632 RHKSDNETNLQQQVV-p A0A0U1RR27;T1063-p RHKSDNETNLQQQVV 0.130972992482068 0.205490478945353 -0.342333333333333 0.215666666666667 18.256991293597 9.04275839256878 -0.342333333333333 0.215666666666667 0.0149382894637712 0.124659149843373 -3.51446332496676 1.81510860959003 A0A0U1RR27 NotFound A0A0U1RR27.T1063.p_NotFound A0A0U1RR27_T1063t _1_1_1063_1063 A0A0U1RR27 A0A0U1RR27|Q7Z401-2 C-myc promoter-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9373.9373.4 15.46 11.2 2 2 1 1 0 712.6159 2767.4752 T1063t TMT10 1056 (K) RHKSDNEtNLQQQVVWGNR (N) RHKS(0.0)DNET(0.99)NLQQQVVWGNR K:TMT10,t:Phosphorylated T DENND4A 217514.7 1 6 399.1 328.24 HUMAN 1 -18.257 9.0428 RHKTYSLSPRDCLKT-p Q86U70;S265-p RHKTYSLSPRDCLKT 0.109756699463187 0.73702819260814 0.448333333333333 -0.117333333333333 20.087124544013 1.82695787657867 0.448333333333333 -0.117333333333333 0.00980138718712779 0.656605040541115 3.89767322798812 -0.470077322254326 Q86U70 LDB1 Q86U70.S265.p_LDB1 Q86U70_S265s _1_1_265_265 Q86U70 Q86U70|Q86U70-2|Q86U70-3 LIM domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14908.14908.3 13.63 10.51 2.445 4 1 1 0 626.6581 1797.9933 S265s TMT10 261 (K) TYSLsPRDCLK (T) T(0.0)Y(0.0)S(0.0)LS(0.99)PRDCLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LDB1 47159.4 2 3 765.1 229.16 HUMAN 1 20.0871 -1.827 RHKYVSGSSPDLVTR-p Q15678;S593-p RHKYVSGSSPDLVTR 0.45060350179761 0.0287769059904504 -0.102333333333333 0.368666666666667 6.39481196639168 20.8644505939307 -0.102333333333333 0.368666666666667 0.229360593303637 0.00819511289244881 -1.35460432421036 4.06296265912548 Q15678 PTPN14 Q15678.S593.p_PTPN14 Q15678_S593s _1_1_593_593 Q15678 Q15678 Tyrosine-protein phosphatase non-receptor type 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13783.13783.2 12.38 6.43 1.188 5 1 1 0 974.0229 1867.0689 S593s TMT10 589 (K) YVSGsSPDLVTRK (V) Y(0.0)VS(0.0)GS(0.99)S(0.0)PDLVT(0.0)RK K:TMT10,s:Phosphorylated S PTPN14 136114.4 14 9 337.1 355.06 HUMAN 1 -6.3948 20.8645 RHLEKVASEEEEVPL-p Q8N3V7-2;S19-p RHLEKVASEEEEVPL 0.873967520582428 0.212823434240992 0.0303333333333333 0.131666666666667 1.14539023118491 8.84186448742347 0.0303333333333333 0.131666666666667 0.768176428814191 0.130561025091277 0.309960679323906 1.78036108651923 Q8N3V7 SYNPO Q8N3V7.2.S19.p_SYNPO Q8N3V7-2_S19s _1_1_19_19 Q8N3V7-2 Q8N3V7|Q8N3V7-2|Q8N3V7-3 Isoform 2 of Synaptopodin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33059.33059.3 17.51 17.51 12.767 2 1 1 0 748.0719 2162.2361 S19s TMT10 17 (K) VAsEEEEVPLVVYLK (E) VAS(0.99)EEEEVPLVVY(0.0)LK K:TMT10,s:Phosphorylated S SYNPO 96794.1 2 1 947.1 196.99 HUMAN 1 1.1454 8.8419 RHLLAVHSKNFPHIC-p P17010-3;S582-p RHLLAVHSKNFPHIC 0.982795908449026 0.0715046833383873 -0.00333333333333335 -0.345666666666667 0.150322311245688 15.2294067761128 -0.00333333333333335 -0.345666666666667 0.965979186274075 0.0299957221711658 -0.0446611885989503 -2.91964732921671 P17010 ZFX P17010.3.S582.p_ZFX P17010-3_S582s _1_1_582_582 P17010-3 P17010-3|Q9Y462-3|P08048|Q9Y462-2|E9PEP7|P08048-3 Isoform 3 of Zinc finger X-chromosomal protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8645.8645.3 11.82 11.82 99 1 1 1 0 481.6146 1362.8622 S582s TMT10 576 (R) HLLAVHsK (N) HLLAVHS(1.0)K K:TMT10,s:Phosphorylated S ZFX 96324.3 1 3 2932.1 65.64 HUMAN 1 -0.1503 -15.2294 RHPKRSVSLSMRKSG-p O60238;S166-p RHPKRSVSLSMRKSG 0.72845418972499 0.729250043637755 0.136333333333333 0.0466666666666667 2.61261311799743 1.88949828762888 0.136333333333333 0.0466666666666667 0.547947169925876 0.647217380274616 0.640568187112868 0.484134071441051 O60238 BNIP3L O60238.S166.p_BNIP3L O60238_S166s _1_1_166_166 O60238 O60238|O60238-2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12699.12699.3 8.53 8.53 5.199 3 1 1 0 482.6033 1365.8288 S166s TMT10 164 (R) SVsLSMRK (S) S(0.0)VS(0.99)LS(0.0)MRK K:TMT10,s:Phosphorylated S BNIP3L 24044.1 3 5 2458.1 82.41 HUMAN 1 2.6126 1.8895 RHQEGKVSDEREGTT-p Q5T3I0;S253-p RHQEGKVSDEREGTT 0.275757791818365 0.328363171153847 -0.408666666666667 -0.169666666666667 10.5831775944844 6.4047016934812 -0.408666666666667 -0.169666666666667 0.0874343811599653 0.228838889015037 -2.08323601170289 -1.35600854008981 Q5T3I0 NotFound Q5T3I0.S253.p_NotFound Q5T3I0_S253s _1_1_253_253 Q5T3I0 Q5T3I0-3|E9PAV9|A0A0A0MRK1 G patch domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4015.4015.4 13.61 9.67 12.588 3 1 1 0 617.8239 2388.3086 S253s TMT10 247 (R) HQEGKVsDEREGTTK (G) HQEGKVS(0.99)DEREGT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S GPATCH4 50608.5 1 4 2093.1 97.96 HUMAN 1 -10.5832 -6.4047 RHRARAHSIQIMKVE-p Q02543;S123-p RHRARAHSIQIMKVE 0.361131241199818 0.371778658302515 -0.125 -0.0966666666666666 8.22127133291732 5.70151659636796 -0.124725637113792 -0.0966666666666667 0.150616609377943 0.269059505925371 -1.67352500859133 -1.23092391872436 Q02543 RPL18A Q02543.S123.p_RPL18A Q02543_S123s _1_1_123_123 Q02543 Q02543|M0R117|M0R1A7|M0R0P7 60S ribosomal protein L18a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20503.20503.4 19.98 19.98 11.149 2 1 1 0 574.0653 2213.2728 S123s Hydrogen 121 (R) AHsIQIMKVEEIAASK (C) AHS(0.99)IQIMKVEEIAAS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S RPL18A 21047.3 10 4 1623.1 126.57 HUMAN 1 -8.2213 -5.7015 RHRRYKHTHEKPFKC-p P49711;T346-p RHRRYKHTHEKPFKC 0.229625390337456 0.00475130945020873 -0.331333333333333 -1.29233333333333 12.2793906008275 33.9685443004987 -0.331333333333333 -1.29233333333333 0.0591644647540583 0.00040100110554011 -2.38199096657327 -7.72210986166568 P49711 CTCF P49711.T346.p_CTCF P49711_T346t _1_1_346_346 P49711 P49711|Q8NI51-7|Q8NI51-3|V9GY73|Q8NI51-8|Q8NI51-2|Q8NI51-4|Q8NI51-10|F5H2V8|Q8NI51-9|V9GZ46|Q8NI51-5|V9GYX4|Q8NI51-6|P49711-2|Q8NI51-11 Transcriptional repressor CTCF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6965.6965.5 13.89 13.89 12.334 2 1 1 0 463.068 2231.3471 T346t TMT10 343 (R) YKHtHEKPFK (C) Y(0.0)KHT(0.99)HEKPFK K:TMT10,t:Phosphorylated T CTCF 84324.5 1 2 1956.1 105.21 HUMAN 1 -12.2794 -33.9685 RHRSNSFSDEREFSG-p Q09666;S5784-p RHRSNSFSDEREFSG 0.198300279868763 0.0949906541206792 -0.229666666666667 -0.195 13.6838311037334 13.5190229666348 -0.229666666666667 -0.195 0.0428170645485506 0.0444731307527421 -2.63505054739858 -2.60352903200719 Q09666 AHNAK Q09666.S5784.p_AHNAK Q09666_S5782sS5784s_2_2_5782_5784 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5665.5665.2 8.25 1.05 2.117 3 2 2 0 665.7498 1170.5588 S5782s S5784s TMT10 5780 (R) SNsFsDER (E) S(0.0)NS(0.99)FS(0.99)DER s:Phosphorylated S AHNAK 629603.7 27 183 1.1 4313.36 HUMAN 1 -13.6838 -13.519 RHRSRCATPPRGDFC-p O43482;T14-p RHRSRCATPPRGDFC 1 0.00165562076525894 -9.25185853854297e-18 -0.836666666666667 0 44.1826506788146 -8.01234452659818e-18 -0.836666666666667 1 3.81711225583025e-05 -1.05844513849255e-16 -12.182673235679 O43482 OIP5 O43482.T14.p_OIP5 O43482_T14t _1_1_14_14 O43482 O43482 Protein Mis18-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5672.5672.3 14.7 14.7 14.7 2 1 1 0 587.567 1680.7217 T14t Hydrogen 12 (R) CAtPPRGDFCGGTER (A) CAT(0.99)PPRGDFCGGT(0.0)ER C:Carbamidomethylation,t:Phosphorylated T OIP5 25204.5 4 1 2455.1 82.73 HUMAN 1 0 -44.1827 RHRSRSRSPDIQAKE-p Q9HCS5;S543-p RHRSRSRSPDIQAKE 0.659829317652971 0.765951062343144 0.0626666666666667 0.0553333333333334 3.38377544688668 1.59994893809271 0.0626666666666667 0.0553333333333334 0.458798992257398 0.691839105126955 0.797339415771587 0.418219745646873 Q9HCS5 EPB41L4A Q9HCS5.S543.p_EPB41L4A Q9HCS5_S543s _1_1_543_543 Q9HCS5 Q9HCS5 Band 4.1-like protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19170.19170.3 15.19 15.19 99 1 1 1 0 661.3528 1902.0737 S543s Hydrogen 543 (R) sPDIQAKEELWK (H) S(1.0)PDIQAKEELWK K:TMT10-Lys-Only,s:Phosphorylated S EPB41L4A 79741.9 6 10 696.1 241.4 HUMAN 1 3.3838 1.5999 RHRSTSPSPSRLKER-p Q8WVK2;S63-p RHRSTSPSPSRLKER 0.358160899463675 0.00584944636792358 0.180666666666667 0.600666666666667 8.28530082625022 32.2750733645585 0.180666666666667 0.600666666666667 0.148412307455792 0.000592233082308393 1.68461992771171 7.14284842307946 Q8WVK2 SNRNP27 Q8WVK2.S63.p_SNRNP27 Q8WVK2_S63s _1_1_63_63 Q8WVK2 B8ZZ98|Q8WVK2 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8188.8188.2 8.89 8.89 1.474 5 1 1 0 799.4398 1517.9052 S63s TMT10 59 (R) STSPsPSRLK (E) S(0.0)T(0.0)S(0.0)PS(0.99)PS(0.0)RLK K:TMT10,s:Phosphorylated S SNRNP27 18859.9 1 1 4128.1 37.02 HUMAN 1 8.2853 32.2751 RHRTLENSPISSCDT-p Q8N556-2;S763-p RHRTLENSPISSCDT 0.26856242313541 0.143783821153633 0.157666666666667 0.150333333333333 10.8257164127275 11.0952154218251 0.157666666666667 0.150333333333333 0.0826853099525173 0.0777102771435557 2.12560351384061 2.1718097879328 Q8N556 AFAP1 Q8N556.2.S763.p_AFAP1 Q8N556-2_S763s _1_1_763_763 Q8N556-2 Q8N556-2 Isoform 2 of Actin filament-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21866.21866.4 21.2 18.5 1.138 8 1 1 0 946.7377 3703.9667 S763s TMT10 759 (R) TLENsPISSCDTSDTEGPVPVNSAAVLKK (S) T(0.0)LENS(0.99)PIS(0.0)S(0.0)CDT(0.0)S(0.0)DT(0.0)EGPVPVNS(0.0)AAVLKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AFAP1 90706.1 4 6 854.1 211.2 HUMAN 1 10.8257 11.0952 RHSDELTSLLGYFPN-p Q92878-2;S571-p RHSDELTSLLGYFPN 0.126867028860092 0.00224652614039878 -0.345333333333333 -0.969333333333333 18.5892767045939 41.0829811266619 -0.345333333333333 -0.969333333333334 0.0138379682411564 7.79294995591534e-05 -3.58252091679541 -10.629362067256 Q92878 RAD50 Q92878.2.S571.p_RAD50 Q92878-2_S571s_1_1_571_571 Q92878-2 Q92878-2|Q92878-3 Isoform 2 of DNA repair protein RAD50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17425.17425.4 8.11 7.04 1.26 4 1 1 0 565.7869 2179.1799 S571s N578n TMT10 565 (R) HSDELTsLLGYFPnK (K) HS(0.0)DELT(0.0)S(0.99)LLGY(0.0)FPN(1.0)K K:TMT10,s:Phosphorylated S,n:Deamidated RAD50 155611.3 1 3 1263.1 160.86 HUMAN 1 -18.5893 -41.083 RHSKARDSDEENDPD-p Q9Y2I9;S555-p RHSKARDSDEENDPD 0.608770429811842 0.0762862581614908 0.0696666666666667 0.196 3.99055808182056 14.8309734236544 0.0696666666666667 0.196 0.398973629724389 0.0328777930633983 0.91532435360871 2.8449789443446 Q9Y2I9 TBC1D30 Q9Y2I9.S555.p_TBC1D30 Q9Y2I9_S555s _1_1_555_555 Q9Y2I9 Q9Y2I9|Q9Y2I9-2|F8VZ81|Q9Y2I9-3 TBC1 domain family member 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36628.36628.4 27.3 22.49 13.272 2 1 1 0 1104.5145 4335.0763 S555s TMT10 552 (K) ARDsDEENDPDDEDAVVNAVGCLGPFSGFLAPELQK (Y) ARDS(0.99)DEENDPDDEDAVVNAVGCLGPFS(0.0)GFLAPELQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TBC1D30 103654.4 9 9 283.1 386.67 HUMAN 1 3.9906 14.831 RHSLSGSSPGMKDIP-p Q9UQ35;S1463-p RHSLSGSSPGMKDIP 0.512060896825979 0.0247309816796438 -0.152 0.345333333333333 5.37386865356802 21.8673374024356 -0.152 0.345333333333333 0.290143693079201 0.00650528397797757 -1.17215161231279 4.28716018596683 Q9UQ35 SRRM2 Q9UQ35.S1463.p_SRRM2 Q9UQ35_S1463s _1_1_1463_1463 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6919.6919.2 12.67 12.67 1.168 4 1 1 0 813.4103 1545.8459 S1463s TMT10 1457 (R) HSLSGSsPGMK (D) HS(0.0)LS(0.0)GS(0.0)S(0.99)PGMK K:TMT10,s:Phosphorylated S SRRM2 300351.7 25 90 2.1 3310.34 HUMAN 1 -5.3739 21.8673 RHTDDEMTGYVATRW-p Q16539-2;T180-p RHTDDEMTGYVATRW 0.294770909920445 0.00879794893477334 0.219 0.576666666666667 10.0078760775819 29.1443201562453 0.219 0.576666666666667 0.0998188109575806 0.00121777760860028 1.98307883306323 6.16653785539506 Q16539 MAPK14 Q16539.2.T180.p_MAPK14 Q16539-2_T180tY182y_2_2_180_182 Q16539-2 Q16539|Q16539-2|Q16539-4|Q16539-3|B4E0K5 Isoform CSBP1 of Mitogen-activated protein kinase 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7252.7252.3 18.82 18.47 6.703 4 2 2 0 628.9209 1724.8111 T180t Y182y TMT10 174 (R) HTDDEMtGyVATR (W) HT(0.0)DDEMT(0.99)GY(0.99)VAT(0.0)R t:Phosphorylated T,y:Phosphorylated Y MAPK14 41720.9 2 4 2943.1 65.26 HUMAN 1 10.0079 29.1443 RHTKKQFSLENVQEG-p O75113;S300-p RHTKKQFSLENVQEG 0.671323918223904 0.920347379548371 -0.0626666666666667 0.014 3.24175952310961 0.507907973684564 -0.0626666666666666 0.014 0.474049887327715 0.889629555319406 -0.769102828055257 0.145423868743279 O75113 N4BP1 O75113.S300.p_N4BP1 O75113_S300s _1_1_300_300 O75113 O75113 NEDD4-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22557.22557.3 23.25 23.25 99 1 1 1 0 832.4242 2415.292 S300s TMT10 298 (K) QFsLENVQEGEILHDAK (T) QFS(1.0)LENVQEGEILHDAK K:TMT10,s:Phosphorylated S N4BP1 101289.8 6 6 889.1 205.17 HUMAN 1 -3.2418 0.5079 RHTVDEYSPQKKNKA-p A8MQ07;S362-p RHTVDEYSPQKKNKA 0.95700161098603 0.0194690898512059 0.0113333333333333 -0.540666666666667 0.375078839680689 23.4921500476947 0.0113333333333333 -0.540666666666667 0.917259283765488 0.00447491711050024 0.108829830437964 -4.66637300699587 A8MQ07 RAPGEF5 A8MQ07.S362.p_RAPGEF5 A8MQ07_S362s _1_1_362_362 A8MQ07 A8MQ07|Q92565|Q92565-2 Rap guanine nucleotide exchange factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6726.6726.4 11.46 11.46 4.376 3 1 1 0 525.5338 2019.1478 S362s TMT10 356 (R) HTVDEYsPQKK (N) HT(0.0)VDEY(0.0)S(0.99)PQKK K:TMT10,s:Phosphorylated S RAPGEF5 85412.8 2 1 4997.1 24.03 HUMAN 1 0.3751 -23.4922 RHTVLYISPPPEDLL-p O94916-5;S163-p RHTVLYISPPPEDLL 0.538210889810119 0.827832243969319 0.11 0.025 4.97426770944952 1.14858680666848 0.11 0.025 0.318107002282911 0.767611229259661 1.09934039807491 0.310714264021174 O94916 NFAT5 O94916.5.S163.p_NFAT5 O94916-5_S163s _1_1_163_163 O94916-5 O94916-5|O94916-4|O94916-2 Isoform E of Nuclear factor of activated T-cells 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20752.20752.3 15.74 15.74 8.723 4 1 1 0 844.4331 2451.3193 S163s TMT10 156 (K) RHTVLYIsPPPEDLLDNSR (M) RHT(0.0)VLY(0.0)IS(0.99)PPPEDLLDNS(0.0)R s:Phosphorylated S NFAT5 168774.8 2 3 1405.1 146.06 HUMAN 1 4.9743 1.1486 RHVCLNQSIDTYTMV-p Q8N680;S414-p RHVCLNQSIDTYTMV 0.125743941781331 0.00649062992679106 -0.382666666666667 -0.596 18.7242140234334 31.4569490824255 -0.382666666666667 -0.596 0.0134146268839441 0.000714998435898953 -3.61034421135796 -6.87634391904616 Q8N680 ZBTB2 Q8N680.S414.p_ZBTB2 Q8N680_S414s _1_1_414_414 Q8N680 Q8N680 Zinc finger and BTB domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19954.19954.3 18.2 18.2 3.747 4 1 1 0 821.4004 2382.2198 S414s TMT10 408 (R) HVCLNQsIDTYTMVDK (Q) HVCLNQS(0.99)IDT(0.0)Y(0.0)T(0.0)MVDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZBTB2 58248.7 2 2 2616.1 76.7 HUMAN 1 -18.7242 -31.4569 RHVPFRWS_______-p Q8NE35-2;S684-p RHVPFRWS_______ 0.448349735417772 0.179132255652999 -0.193333333333333 0.170666666666667 6.43098043521388 9.82085797911137 -0.193333333333333 0.170666666666667 0.227458387741906 0.104211153263692 -1.36099357169992 1.94983089436844 Q8NE35 CPEB3 Q8NE35.2.S684.p_CPEB3 Q8NE35-2_S684s _1_1_684_684 Q8NE35-2 Q8NE35|Q8NE35-2 Isoform 2 of Cytoplasmic polyadenylation element-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16333.16333.3 7.73 7.73 99 1 1 1 0 413.208 1157.6417 S684s TMT10 678 (R) HVPFRWs (-) HVPFRWS(1.0) s:Phosphorylated S CPEB3 75066.7 1 5 2497.1 81.21 HUMAN 1 -6.431 9.8209 RIAAYAYSALSQIRV-p Q6IAA8;S141-p RIAAYAYSALSQIRV 0.876258591121638 0.643247086095429 0.0243333333333333 -0.0649999999999999 1.12498316563775 2.61181901699289 0.0243333333333333 -0.065 0.771794507251653 0.548047370411871 0.304941850200239 -0.640318562823866 Q6IAA8 LAMTOR1 Q6IAA8.S141.p_LAMTOR1 Q6IAA8_S141s _1_1_141_141 Q6IAA8 Q6IAA8 Ragulator complex protein LAMTOR1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28564.28564.3 16.79 16.79 4.702 4 1 1 0 579.3041 1655.9318 S141s TMT10 135 (R) IAAYAYsALSQIR (V) IAAY(0.0)AY(0.0)S(0.99)ALS(0.0)QIR s:Phosphorylated S LAMTOR1 17858.6 5 7 1333.1 152.96 HUMAN 1 1.125 -2.6118 RIAGLSKSLETSSAL-p Q7Z333-4;S1613-p RIAGLSKSLETSSAL 0.0963407255186167 0.64561599551343 -0.370333333333333 0.0733333333333333 21.5592750921048 2.59113493016378 -0.370333333333333 0.0733333333333333 0.00698348960111969 0.550663774108275 -4.22186783937071 0.635986715720457 Q7Z333 SETX Q7Z333.4.S1613.p_SETX Q7Z333-4_S1613s _1_1_1613_1613 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20355.20355.3 10.66 10.26 1.224 6 1 1 0 620.0042 1778.0312 S1613s TMT10 1613 (K) sLETSSALSPSLK (N) S(0.99)LET(0.0)S(0.0)S(0.0)ALS(0.0)PS(0.0)LK K:TMT10,s:Phosphorylated S SETX 310728.6 1 13 192.1 463.82 HUMAN 1 -21.5593 2.5911 RIAPRPASGPIRPIV-p P26373;S52-p RIAPRPASGPIRPIV 0.753636807176205 0.926764493182244 0.0833333333333333 0.00933333333333334 2.3462885579281 0.466900686893571 0.0833333333333333 0.00933333333333335 0.582600890634135 0.898069467050171 0.584194234749158 0.13422085982614 P26373 RPL13 P26373.S52.p_RPL13 P26373_S52s _1_1_52_52 P26373 P26373|P26373-2 60S ribosomal protein L13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12779.12779.4 8.38 8.38 99 1 1 1 0 478.0325 1829.1435 S52s TMT10 46 (R) IAPRPAsGPIRPIVR (C) IAPRPAS(1.0)GPIRPIVR s:Phosphorylated S RPL13 24318.1 2 1 3743.1 44.08 HUMAN 1 2.3463 0.4669 RIAQLSESPVILTPN-p Q6P4F7;S318-p RIAQLSESPVILTPN 0.768386735945348 0.0251249872477674 0.041 -0.437333333333333 2.19323095651858 21.7699092356447 0.041 -0.437333333333333 0.60349948572605 0.00665287060067112 0.551181574657683 -4.26506135493778 Q6P4F7 ARHGAP11A Q6P4F7.S318.p_ARHGAP11A Q6P4F7_S318s _1_1_318_318 Q6P4F7 Q6P4F7|Q6P4F7-3|Q6P4F7-2|H3BR51 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21416.21416.4 18.96 18.96 1.683 3 1 1 0 594.592 2295.38 S318s TMT10 312 (R) IAQLSEsPVILTPNAKR (T) IAQLS(0.0)ES(0.99)PVILT(0.0)PNAKR K:TMT10,s:Phosphorylated S ARHGAP11A 114948.2 3 2 414.1 321.53 HUMAN 1 2.1932 -21.7699 RIATTTASAATAAAI-p Q14980;S2096-p RIATTTASAATAAAI 0.375226204548174 0.768932504357497 0.126666666666667 -0.03 7.87862727479678 1.57809878244996 0.126666666666667 -0.03 0.162981110463079 0.695328646048303 1.61409841295782 -0.413155757488259 Q14980 NUMA1 Q14980.S2096.p_NUMA1 Q14980_S2096s _1_1_2096_2096 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19868.19868.3 15.55 15.55 1.279 6 1 1 0 675.6898 1945.0916 S2096s TMT10 2090 (R) IATTTAsAATAAAIGATPR (A) IAT(0.0)T(0.0)T(0.0)AS(0.99)AAT(0.0)AAAIGAT(0.0)PR s:Phosphorylated S NUMA1 239339.3 1 39 31.1 900.97 HUMAN 1 7.8786 -1.5781 RIAVNPASLGERRKD-p Q8TDM6;S1334-p RIAVNPASLGERRKD 0.62753280718401 0.130332427127905 0.0866666666666667 -0.187666666666667 3.76138821139037 11.6627992742911 0.0866666666666667 -0.187666666666667 0.420592165667146 0.0681899029856869 0.871234823611749 -2.27156726912258 Q8TDM6 DLG5 Q8TDM6.S1334.p_DLG5 Q8TDM6_S1334s _1_1_1334_1334 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17583.17583.2 10.84 6.99 99 1 1 1 0 718.3784 1355.7844 S1334s TMT10 1328 (R) IAVNPAsLGER (R) IAVNPAS(1.0)LGER s:Phosphorylated S DLG5 215575.4 1 34 34.1 890.58 HUMAN 1 3.7614 -11.6628 RIDDEIDTEVEETQE-p A0A0C4DGZ1;T32-p RIDDEIDTEVEETQE 0.932495418439431 0.0681786670618894 0.0146666666666667 -0.317 0.600432086490072 15.5167139264225 0.0146666666666667 -0.317 0.870876940713239 0.0280755716250112 0.170411595264819 -2.9739116277511 A0A0C4DGZ1 NotFound A0A0C4DGZ1.T32.p_NotFound A0A0C4DGZ1_T32t _1_1_32_32 A0A0C4DGZ1 A0A0C4DGZ1|Q8N5P1 Zinc finger CCCH domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17022.17022.3 24.07 24.07 5.923 5 1 1 0 1112.5065 3255.5276 T32t TMT10 18 (K) TATDSDERIDDEIDtEVEETQEEK (I) T(0.0)AT(0.0)DS(0.0)DERIDDEIDT(0.99)EVEET(0.0)QEEK K:TMT10,t:Phosphorylated T ZC3H8 34999.7 2 2 1997.1 103.4 HUMAN 1 0.6004 -15.5167 RIDFDLYT_______-p O95400;T341-p RIDFDLYT_______ 0.934377786071211 0.587542982414766 0.0146666666666667 0.058 0.579762190795928 3.12150148365307 0.0146666666666667 0.058 0.875031688544528 0.487359966310512 0.164868256359326 0.744877399178543 O95400 CD2BP2 O95400.T341.p_CD2BP2 O95400_T341t _1_1_341_341 O95400 O95400 CD2 antigen cytoplasmic tail-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22574.22574.2 12.32 10.77 3.428 2 1 1 0 676.3282 1271.6833 T341t TMT10 334 (K) RIDFDLYt (-) RIDFDLY(0.0)T(0.99) t:Phosphorylated T CD2BP2 37759.9 1 5 852.1 212.12 HUMAN 1 0.5798 3.1215 RIDFIPVSPAPSPTR-p Q96E09;S143-p RIDFIPVSPAPSPTR 0.322413243844237 0.723035339968581 0.206666666666667 0.0413333333333334 9.20126261154351 1.93829101236261 0.206666666666667 0.0413333333333334 0.120191495462692 0.639986626401088 1.84320813091677 0.495035526702165 Q96E09 FAM122A Q96E09.S143.p_FAM122A Q96E09_S143s _1_1_143_143 Q96E09 Q96E09 Protein FAM122A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20958.20958.3 17.41 17.41 4.935 3 1 1 0 654.6854 1882.0748 S143s TMT10 136 (K) RIDFIPVsPAPSPTR (G) RIDFIPVS(0.99)PAPS(0.0)PT(0.0)R s:Phosphorylated S FAM122A 30813.8 4 5 509.1 287.77 HUMAN 1 9.2013 1.9383 RIDFTPVSPAPSPTR-p G1UD79;S134-p RIDFTPVSPAPSPTR 0.451823780329444 0.36708239185726 0.104 0.185 6.36781587343603 5.77123464210042 0.104 0.185 0.230790757530811 0.264774731186068 1.34983262136272 1.24341635349694 G1UD79 FAM122B G1UD79.S134.p_FAM122B G1UD79_S134s _1_1_134_134 G1UD79 G1UD79|Q7Z309-3|Q7Z309-2|Q7Z309-4|Q7Z309-5 Protein FAM122B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15610.15610.3 19.87 19.87 5.578 4 1 1 0 650.6729 1870.0384 S134s TMT10 127 (K) RIDFTPVsPAPSPTR (G) RIDFT(0.0)PVS(0.99)PAPS(0.0)PT(0.0)R s:Phosphorylated S SPACIA2 29414.5 2 4 835.1 215.14 HUMAN 1 6.3678 5.7712 RIDGKLDSPSRSPSK-p O14523;S464-p RIDGKLDSPSRSPSK 0.164162708749184 0.0549664114060967 -0.320666666666667 -0.27 15.720688429969 16.7869543018112 -0.320666666666667 -0.27 0.0267874366513175 0.0209558156765264 -3.01474138072941 -3.21837653503867 O14523 C2CD2L O14523.S464.p_C2CD2L O14523_S464s _1_1_464_464 O14523 O14523-2|E9PK05 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10714.10714.2 13.1 9.38 1.905 2 1 1 0 813.4373 1545.9001 S464s TMT10 458 (R) IDGKLDsPSR (S) IDGKLDS(0.99)PS(0.0)R K:TMT10,s:Phosphorylated S C2CD2L 76636.4 9 10 411.1 322.51 HUMAN 1 -15.7207 -16.787 RIDRDSYSPRWKGRW-p Q99590;S963-p RIDRDSYSPRWKGRW 0.48046826185149 0.182300446136055 0.103 -0.133666666666667 5.85957090221662 9.72364383507534 0.103 -0.133666666666667 0.259443568856412 0.106570159676773 1.25950663758994 -1.93297796184072 Q99590 SCAF11 Q99590.S963.p_SCAF11 Q99590_S963s _1_1_963_963 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6247.6247.3 12.77 9.05 3.457 3 1 1 0 473.2275 1337.7011 S963s TMT10 957 (R) IDRDSYsPR (W) IDRDS(0.0)Y(0.0)S(0.99)PR s:Phosphorylated S SCAF11 166418 5 23 120.1 549.85 HUMAN 1 5.8596 -9.7236 RIEEELGSKAKFAGR-p P06733;S419-p RIEEELGSKAKFAGR 0.839274651786147 0.433845309697775 -0.041 0.205 1.47298221354716 4.83257821672506 -0.0410000000000001 0.205 0.712363696202306 0.328656463957243 -0.388646406122496 1.07307521149768 P06733 ENO1 P06733.S419.p_ENO1 P06733_S419s _1_1_419_419 P06733 P06733|P06733-2 Alpha-enolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26275.26275.3 14.62 14.62 14.616 2 1 1 0 744.0687 2150.2221 S419s TMT10 407 (K) YNQLLRIEEELGsK (A) Y(0.0)NQLLRIEEELGS(0.99)K K:TMT10,s:Phosphorylated S ENO1 47510.4 5 15 623.1 259.34 HUMAN 1 -1.473 4.8326 RIERNLQSPTQFQTP-p O75385;S450-p RIERNLQSPTQFQTP 0.106447952251166 0.0301337338809123 -0.300333333333333 -0.338 20.4830123458477 20.5776814667795 -0.300333333333333 -0.338 0.00894743939527943 0.00875451020529523 -3.98338537763122 -4.00015663142264 O75385 ULK1 O75385.S450.p_ULK1 O75385_S450s _1_1_450_450 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13334.13334.2 8.09 8.09 8.086 3 1 1 0 863.4282 1645.8859 S450s TMT10 447 (R) NLQsPTQFQTPR (S) NLQS(0.99)PT(0.0)QFQT(0.0)PR s:Phosphorylated S ULK1 113656.3 2 5 351.1 351.01 HUMAN 1 -20.483 -20.5777 RIESKSMSAPVIFDR-p O60749;S119-p RIESKSMSAPVIFDR 0.415832213781679 0.471106749262888 0.113 0.0746666666666667 7.03218043432276 4.35705097397306 0.113 0.0746666666666667 0.198053242299646 0.366686484309118 1.46664505974988 0.984616138834249 O60749 SNX2 O60749.S119.p_SNX2 O60749_S119s _1_1_119_119 O60749 O60749 Sorting nexin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21271.21271.2 13.87 7.15 2.831 2 1 1 0 716.3497 1351.7241 S119s TMT10 117 (K) SMsAPVIFDR (S) S(0.0)MS(0.99)APVIFDR s:Phosphorylated S SNX2 58584.2 4 1 1560.2 131.56 HUMAN 1 7.0322 4.3571 RIFRALGTPNNEVWP-p P06493;T222-p RIFRALGTPNNEVWP 0.582375705176241 0.3016616965161 0.086 -0.146333333333333 4.32259869395437 6.87037524422109 0.086 -0.146333333333333 0.369606951371007 0.205571296818317 0.97831388259639 -1.43791354746691 P06493 CDK1 P06493.T222.p_CDK1 P06493_T222t _1_1_222_222 P06493 A0A024QZP7|P06493|P06493-2 Cyclin-dependent kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30120.30120.3 8.86 8.86 7.966 3 1 1 0 943.1356 2747.4292 T222t TMT10 219 (R) ALGtPNNEVWPEVESLQDYK (N) ALGT(0.99)PNNEVWPEVES(0.0)LQDY(0.0)K K:TMT10,t:Phosphorylated T CDK1 34151.9 1 8 1934.1 106.29 HUMAN 1 4.3226 -6.8704 RIFSLSGTLETVRGR-p Q9Y2S7;T292-p RIFSLSGTLETVRGR 0.345757887787618 0.787855385190929 -0.141666666666667 -0.0306666666666666 8.56995736743929 1.43765758752151 -0.141666666666667 -0.0306666666666666 0.138996627576406 0.718181545516755 -1.73391941406576 -0.380282997365659 Q9Y2S7 POLDIP2 Q9Y2S7.T292.p_POLDIP2 Q9Y2S7_T292t _1_1_292_292 Q9Y2S7 Q9Y2S7|B4DEM9 Polymerase delta-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27521.27521.3 16.53 16.53 1.106 4 1 1 0 544.6254 1551.8944 T292t TMT10 286 (R) IFSLSGtLETVR (G) IFS(0.0)LS(0.0)GT(0.99)LET(0.0)VR t:Phosphorylated T POLDIP2 42260.7 3 2 4490.1 30.76 HUMAN 1 -8.57 -1.4377 RIGEEDSTDDEDGLL-p Q8IX21-2;T711-p RIGEEDSTDDEDGLL 0.235118035263392 0.0546575861182109 0.2025 -0.246833333333333 12.0465023943857 16.8261447215684 0.2025 -0.246833333333333 0.0624237364816808 0.0207675625810173 2.34058551712947 -3.22604364459466 Q8IX21 SLF2 Q8IX21.2.T711.p_SLF2 Q8IX21-2_S710sT711t_2_2_710_711 Q8IX21-2 Q8IX21-2 Isoform 2 of SMC5-SMC6 complex localization factor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15535.15535.3 15.47 15.47 99 2 2 2 0 807.3272 2260.0302 S710s T711t Hydrogen 705 (R) IGEEDstDDEDGLLEEHK (E) IGEEDS(1.0)T(1.0)DDEDGLLEEHK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T SLF2 134456.8 3 11 1220.1 164.91 HUMAN 2 12.0465 -16.8261 RIGIINYSHKVEKVA-p Q2UY09;S843-p RIGIINYSHKVEKVA 0.349046999006009 0.966504145237237 0.197666666666667 0.00433333333333334 8.49213304340264 0.209669156798312 0.197666666666667 0.00433333333333333 0.1415098581606 0.952868750287991 1.72044436953787 0.0618888090686905 Q2UY09 COL28A1 Q2UY09.S843.p_COL28A1 Q2UY09_T823tS843s_2_2_823_843 Q2UY09 Q2UY09 Collagen alpha-1(XXVIII) chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8194.8194.5 11.72 1.95 1.597 4 2 2 0 891.0772 4290.493 T823t N841n S843s TMT10 819 (K) NFVKtMADRVALDLATARIGIInYsHKVEK (V) N(0.0)FVKT(0.99)MADRVALDLAT(0.0)ARIGIIN(0.99)Y(0.0)S(0.99)HKVEK K:TMT10,t:Phosphorylated T,n:Deamidated,s:Phosphorylated S COL28A1 117510.9 1 1 6432.1 11.72 HUMAN 1 8.4921 0.2097 RIGTHNGTFHCDEAL-p Q9HB07;T53-p RIGTHNGTFHCDEAL 0.123350251698765 0.00898490162031833 0.330333333333333 0.462666666666667 18.9273921841437 28.981668409313 0.330333333333333 0.462666666666667 0.0128014976723847 0.00126425057278899 3.65244445003574 6.11891045434592 Q9HB07 NotFound Q9HB07.T53.p_NotFound Q9HB07_T53t _1_1_53_53 Q9HB07 Q9HB07|F8VQQ3 UPF0160 protein MYG1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22373.22373.3 18.86 18.86 3.538 2 1 1 0 855.7365 2485.2278 T53t TMT10 47 (R) IGTHNGtFHCDEALACALLR (L) IGT(0.0)HNGT(0.99)FHCDEALACALLR C:Carbamidomethylation,t:Phosphorylated T C12orf10 42790.8 1 1 3637.1 46.39 HUMAN 1 18.9274 28.9817 RIHLRNPSAAFFCVA-p O75223;S37-p RIHLRNPSAAFFCVA 0.548481226258502 0.355948754729404 0.100666666666667 0.095 4.81429822332098 5.95033451486912 0.100666666666667 0.095 0.330042735224875 0.25407769949306 1.06991477789051 1.27540996499128 O75223 GGCT O75223.S37.p_GGCT O75223_S37s _1_1_37_37 O75223 O75223|O75223-4|B8ZZK2|O75223-2|O75223-3 Gamma-glutamylcyclotransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20970.20970.2 7.59 2.24 99 1 1 1 0 774.8665 1468.7568 S37s TMT10 35 (R) NPsAAFFCVAR (L) NPS(1.0)AAFFCVAR C:Carbamidomethylation,s:Phosphorylated S GGCT 21235.6 1 3 1818.1 112.92 HUMAN 1 4.8143 5.9503 RIHQDSESGDELSSS-p Q1RLN5;S215-p RIHQDSESGDELSSS 0.239445180132605 0.243007598977205 0.223333333333333 0.354666666666667 11.8673714730332 8.093187955388 0.223333333333333 0.354666666666667 0.0650523294393218 0.155124789242638 2.30883187202247 1.65079279259509 Q1RLN5 ARHGAP12 Q1RLN5.S215.p_ARHGAP12 Q1RLN5_S215s _1_1_215_215 Q1RLN5 Q8IWW6|Q8IWW6-4|Q8IWW6-2|Q1RLN5|Q8IWW6-3 ARHGAP12 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9816.9816.3 23.14 19.28 4.313 7 1 1 0 838.7113 2434.1531 S215s TMT10 209 (R) IHQDSEsGDELSSSSTEQIR (A) IHQDS(0.0)ES(0.99)GDELS(0.0)S(0.0)S(0.0)S(0.0)T(0.0)EQIR s:Phosphorylated S ARHGAP12 91157.4 3 5 974.1 193.01 HUMAN 1 11.8674 8.0932 RIILNSHSPAGSAAI-p Q9UPU5;S1612-p RIILNSHSPAGSAAI 0.898522472312718 0.757213352961992 0.0186666666666667 -0.0316666666666667 0.910382363506737 1.67003367916836 0.0186666666666667 -0.0316666666666666 0.810889661997563 0.680764079405632 0.251245209767756 -0.434374391320129 Q9UPU5 USP24 Q9UPU5.S1612.p_USP24 Q9UPU5_S1612s _1_1_1612_1612 Q9UPU5 Q9UPU5 Ubiquitin carboxyl-terminal hydrolase 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17885.17885.5 25.08 25.08 2.114 4 1 1 0 572.1024 2776.5146 S1612s TMT10 1606 (R) IILNSHsPAGSAAISQQDFHPK (C) IILNS(0.0)HS(0.99)PAGS(0.0)AAIS(0.0)QQDFHPK K:TMT10,s:Phosphorylated S USP24 297383.8 2 132 8.4 1346.57 HUMAN 1 0.9104 -1.67 RIILPDDSSEEENNV-p Q8IYD8;S1673-p RIILPDDSSEEENNV 0.51636083436218 0.00840448513471 0.093 -0.568666666666667 5.29913109397731 29.4845311030751 0.093 -0.568666666666667 0.295179974303746 0.00112602203612417 1.1586038183764 -6.2671015338771 Q8IYD8 FANCM Q8IYD8.S1673.p_FANCM Q8IYD8_S1673sS1674s_2_2_1673_1674 Q8IYD8 Q8IYD8|Q8IYD8-3 Fanconi anemia group M protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20078.20078.4 9.72 7.64 99 2 2 2 0 677.0677 2545.3146 S1673s S1674s TMT10 1667 (R) IILPDDssEEENNVNDKR (E) IILPDDS(1.0)S(1.0)EEENNVNDKR K:TMT10,s:Phosphorylated S FANCM 234983 3 6 2500.1 81.07 HUMAN 1 5.2991 -29.4845 RIIYDSDSESEETLQ-p P35251;S71-p RIIYDSDSESEETLQ 0.599293333730841 0.014084328884231 -0.072 0.568666666666667 4.11001343478424 25.6773373950811 -0.072 0.568666666666667 0.388149165259676 0.00270561663529945 -0.938101202540018 5.21066211177326 P35251 RFC1 P35251.S71.p_RFC1 P35251_S71s _1_1_71_71 P35251 P35251|P35251-2|E0CX09 Replication factor C subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17560.17560.2 15.56 12.26 1.134 5 1 1 0 1083.0091 2085.0437 S71s Hydrogen 65 (R) IIYDSDsESEETLQVK (N) IIY(0.0)DS(0.0)DS(0.99)ES(0.0)EET(0.0)LQVK K:TMT10-Lys-Only,s:Phosphorylated S RFC1 128765.8 4 4 316.1 367.51 HUMAN 1 -4.11 25.6773 RIKEEPVSEEGEEDE-p Q9NVU0;S503-p RIKEEPVSEEGEEDE 0.126572282263763 0.024864136244629 0.272666666666667 0.305666666666667 18.6373236371434 21.8279914623434 0.272666666666667 0.305666666666667 0.0136857195552826 0.0065644879244216 3.59241548562301 4.27822724881455 Q9NVU0 POLR3E Q9NVU0.S503.p_POLR3E Q9NVU0_S503s _1_1_503_503 Q9NVU0 Q9NVU0|Q9NVU0-4|Q9NVU0-5|A0A0C4DH01|Q9NVU0-2|Q9NVU0-3 DNA-directed RNA polymerase III subunit RPC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15482.15482.5 28.78 28.78 16.587 5 1 1 0 894.4106 4388.0702 S503s TMT10 497 (R) IKEEPVsEEGEEDEEQEAEEEPMDTSPSGLHSK (L) IKEEPVS(0.99)EEGEEDEEQEAEEEPMDT(0.0)S(0.0)PS(0.0)GLHS(0.0)K K:TMT10,s:Phosphorylated S POLR3E 80581.3 2 3 2480.1 81.72 HUMAN 1 18.6373 21.828 RIKGRLDSSEMDHSE-p Q9NTI5;S1176-p RIKGRLDSSEMDHSE 0.807190843839437 0.0400978302262368 -0.039 0.262 1.79105030433618 18.7289990730445 -0.039 0.262 0.662056371626129 0.0133998548090546 -0.462014773461552 3.6082269487308 Q9NTI5 PDS5B Q9NTI5.S1176.p_PDS5B Q9NTI5_S1176sS1177sS1182s_3_3_1176_1182 Q9NTI5 Q9NTI5-2 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17281.17281.4 12.63 12.63 2.7 7 3 3 0 960.1747 3597.7768 S1176s S1177s S1182s TMT10 1172 (K) GRLDssEMDHsENEDYTMSSPLPGKK (S) GRLDS(0.99)S(0.99)EMDHS(0.99)ENEDY(0.0)T(0.0)MS(0.0)S(0.0)PLPGKK K:TMT10,s:Phosphorylated S PDS5B 165919.5 5 26 100.1 597.99 HUMAN 1 -1.7911 18.729 RIKLLNNSDERLQNS-p Q4LE39;S912-p RIKLLNNSDERLQNS 0.852198059300558 0.00238856624082869 -0.0526666666666667 -0.863666666666667 1.34509874863292 40.2261659409806 -0.0526666666666667 -0.863666666666667 0.733652032659339 9.49256120257588e-05 -0.358335040667549 -10.2335600480777 Q4LE39 ARID4B Q4LE39.S912.p_ARID4B Q4LE39_S912s _1_1_912_912 Q4LE39 Q4LE39|Q4LE39-2 AT-rich interactive domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10311.10319.3 16.92 10.9 16.42 2 1 1 0 623.3122 1787.9561 S912s TMT10 908 (K) LLNNsDERLQNSR (A) LLNNS(0.99)DERLQNS(0.0)R s:Phosphorylated S ARID4B 148890.9 1 11 191.1 463.89 HUMAN 1 -1.3451 -40.2262 RIKNLLRSPSIKLRR-p O60336;S18-p RIKNLLRSPSIKLRR 0.959656130624186 0.0524768061388775 -0.00833333333333333 -0.269 0.345583827504073 17.0758870135576 -0.00833333333333334 -0.269 0.923510031465896 0.0196070067632795 -0.100573909840858 -3.27508685065156 O60336 MAPKBP1 O60336.S18.p_MAPKBP1 O60336_S18s _1_1_18_18 O60336 O60336|O60336-6|O60336-3|O60336-2|D6RHX7|O60336-5|D6RAI2 Mitogen-activated protein kinase-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14854.14854.3 10.96 2.99 2.473 2 1 1 0 522.6445 1485.9517 S18s TMT10 14 (K) NLLRsPSIK (L) NLLRS(0.99)PS(0.0)IK K:TMT10,s:Phosphorylated S MAPKBP1 165641 2 1 2161.1 95 HUMAN 1 -0.3456 -17.0759 RIKRDIMSIYKEPPP-p Q9H832;S110-p RIKRDIMSIYKEPPP 0.143638422086766 0.685646728628593 -0.397333333333333 -0.0613333333333333 17.2040985303391 2.24343569940708 -0.397333333333333 -0.0613333333333333 0.0190366334198714 0.596563159325731 -3.30294247041608 -0.561994037846588 Q9H832 UBE2Z Q9H832.S110.p_UBE2Z Q9H832_S110s _1_1_110_110 Q9H832 Q9H832 Ubiquitin-conjugating enzyme E2 Z HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.34660.34660.4 21.81 21.81 6.105 4 1 1 0 870.198 3397.8065 S110s TMT10 107 (R) DIMsIYKEPPPGMFVVPDTVDMTK (I) DIMS(0.99)IY(0.0)KEPPPGMFVVPDT(0.0)VDMT(0.0)K K:TMT10,s:Phosphorylated S UBE2Z 38665.9 1 1 5205.1 21.81 HUMAN 1 -17.2041 -2.2434 RIKRNEQSLQEIWDY-p Q9UN81;S145-p RIKRNEQSLQEIWDY 0.43773303002828 0.997855839640213 0.105333333333333 -0.000333333333333306 6.60792533776571 0.0127165866009702 0.105333333333333 -0.000333333333333298 0.218377286986139 0.997076180436257 1.39219253228676 -0.00383642573660127 Q9UN81 NotFound Q9UN81.S145.p_NotFound Q9UN81_S145s _1_1_145_145 Q9UN81 Q9UN81 LINE-1 retrotransposable element ORF1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26153.26153.3 19.25 13.83 8.252 2 1 1 0 782.7346 2266.2232 S145s TMT10 141 (K) RNEQsLQEIWDYVK (R) RNEQS(0.99)LQEIWDY(0.0)VK K:TMT10,s:Phosphorylated S L1RE1 40283.2 2 158 240.3 415.72 HUMAN 1 6.6079 -0.0127 RIKTEPSSPLSDPSD-p Q9ULJ3;S435-p RIKTEPSSPLSDPSD 0.855055591870974 0.311457864458608 -0.0266666666666667 -0.0993333333333333 1.32128321491114 6.69510415025843 -0.0266666666666667 -0.0993333333333333 0.737686232923283 0.214037359682259 -0.352634571167129 -1.40715806113808 Q9ULJ3 ZBTB21 Q9ULJ3.S435.p_ZBTB21 Q9ULJ3_S435s _1_1_435_435 Q9ULJ3 Q9ULJ3|Q9ULJ3-2 Zinc finger and BTB domain-containing protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19880.19880.3 14.8 14.8 1.679 5 1 1 0 798.4308 2313.3066 S435s TMT10 429 (R) IKTEPSsPLSDPSDIIR (V) IKT(0.0)EPS(0.0)S(0.99)PLS(0.0)DPS(0.0)DIIR K:TMT10,s:Phosphorylated S ZBTB21 120636.9 10 4 692.1 242.92 HUMAN 1 -1.3213 -6.6951 RIKVGRDYVQKAQTK-p P35579;Y400-p RIKVGRDYVQKAQTK 0.077508331711075 0.147470428522424 -0.669 0.166333333333333 23.7917175766942 10.9429557585298 -0.669 0.166333333333333 0.00417665152987026 0.0804830496334875 -4.74412242663777 2.14515729149387 P35579 MYH9 P35579.Y400.p_MYH9 P35579_Y400y _1_1_400_400 P35579 P35580-5|P35579|Q7Z406-4|Q7Z406-5|P35579-2|Q7Z406-2|P35580-4|Q7Z406-6|P35580-3|P35580-2 Myosin-9 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.9286.9286.3 7.75 7.75 99 1 1 1 0 501.6094 1422.8469 Y400y TMT10 396 (K) VGRDyVQK (A) VGRDY(1.0)VQK K:TMT10,y:Phosphorylated Y MYH9 227783.5 2 1 229.1 15.68 HUMAN 1 -23.7917 10.943 RILARRQTIEERKER-p Q14152;T574-p RILARRQTIEERKER 0.275945181439664 0.00840448513471 0.505333333333333 0.673666666666667 10.5771519799527 29.4781214297624 0.505333333333333 0.673666666666667 0.0875557761015651 0.00112768513854797 2.08218462387537 6.26519498561784 Q14152 EIF3A Q14152.T574.p_EIF3A Q14152_T574t _1_1_574_574 Q14152 Q14152 Eukaryotic translation initiation factor 3 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4013.4013.3 7.2 4.35 99 1 1 1 0 414.2131 1160.6585 T574t TMT10 572 (R) RQtIEER (K) RQT(1.0)IEER t:Phosphorylated T EIF3A 166965.8 1 3 1342.1 151.61 HUMAN 1 10.5772 29.4781 RILDFSATPDLPDQV-p Q9Y4G8;T602-p RILDFSATPDLPDQV 0.930978723493408 0.658693362980574 -0.0176666666666667 -0.0613333333333333 0.615730566112539 2.48023352143495 -0.0176666666666667 -0.0613333333333333 0.867814582056396 0.564906598799768 -0.174501392064523 -0.612631609284995 Q9Y4G8 RAPGEF2 Q9Y4G8.T602.p_RAPGEF2 Q9Y4G8_T602t _1_1_602_602 Q9Y4G8 Q9Y4G8 Rap guanine nucleotide exchange factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.33440.33440.3 15.66 15.66 2.504 2 1 1 0 703.6986 2029.1167 T602t TMT10 596 (R) ILDFSAtPDLPDQVLR (V) ILDFS(0.0)AT(0.99)PDLPDQVLR t:Phosphorylated T RAPGEF2 168269.8 1 1 2213.1 93.37 HUMAN 1 -0.6157 -2.4802 RILEDHGSPAGEIDD-p E7ETA6;S1722-p RILEDHGSPAGEIDD 0.224449743030132 0.658693362980574 -0.304666666666667 -0.0613333333333333 12.4669680786071 2.48023352143495 -0.304666666666667 -0.0613333333333333 0.0566634733257244 0.564906598799768 -2.41544624435455 -0.612631609284995 E7ETA6 PCM1 E7ETA6.S1722.p_PCM1 E7ETA6_S1722s _1_1_1722_1722 E7ETA6 E7ETA6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12591.12591.4 19.13 19.13 9.105 3 1 1 0 913.9482 3572.8059 S1722s Hydrogen 1716 (R) ILEDHGsPAGEIDDEDKDKDETETVK (Q) ILEDHGS(0.99)PAGEIDDEDKDKDET(0.0)ET(0.0)VK K:TMT10-Lys-Only,s:Phosphorylated S PCM1 229381.8 5 49 13.1 1159.95 HUMAN 1 -12.467 -2.4802 RILEEWKTKYHPPPE-p Q9NZC7-3;T174-p RILEEWKTKYHPPPE 0.936822382599764 0.333288220646353 -0.013 0.110333333333333 0.551273835359686 6.32402858507044 -0.013 0.110333333333333 0.880790489197594 0.23312945128903 -0.157194582263057 1.34175231804723 Q9NZC7 WWOX Q9NZC7.3.T174.p_WWOX Q9NZC7-3_T174t _1_1_174_174 Q9NZC7-3 Q9NZC7-3 Isoform 3 of WW domain-containing oxidoreductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24486.24486.3 8.31 7.03 1.723 2 1 1 0 545.6257 1554.9044 T174t Hydrogen 174 (K) tKYHPPPEK (C) T(0.99)KY(0.0)HPPPEK K:TMT10-Lys-Only,t:Phosphorylated T WWOX 21672.8 1 2 4795.1 26.51 HUMAN 1 -0.5513 6.324 RILEIQLSPAQNASS-p Q86UQ0-3;S187-p RILEIQLSPAQNASS 0.247779449612631 0.596568718262188 0.26 0.075 11.578265885774 3.03676231328545 0.26 0.0750000000000001 0.0695301892428919 0.496962671499198 2.2577462070532 0.727766432190552 Q86UQ0 ZNF589 Q86UQ0.3.S187.p_ZNF589 Q86UQ0-3_S187s _1_1_187_187 Q86UQ0-3 Q86UQ0-3 Isoform 3 of Zinc finger protein 589 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25515.25515.3 11.9 11.9 7.163 3 1 1 0 803.403 2328.2244 S187s TMT10 181 (R) ILEIQLsPAQNASSEEVDR (I) ILEIQLS(0.99)PAQNAS(0.0)S(0.0)EEVDR s:Phosphorylated S ZNF589 49014.6 1 1 6394.1 11.9 HUMAN 1 11.5783 3.0368 RILRRTASAPAKGRK-p Q4KWH8;S923-p RILRRTASAPAKGRK 0.0395731079578075 0.188115797671727 0.565666666666667 0.152 31.5277151059386 9.54419860224492 0.565666666666667 0.152 0.00070344231501345 0.111065746455066 6.9107407820151 1.90188900859189 Q4KWH8 PLCH1 Q4KWH8.S923.p_PLCH1 Q4KWH8_S923s _1_1_923_923 Q4KWH8 Q4KWH8|Q4KWH8-2|Q4KWH8-4|Q4KWH8-3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6033.6033.2 9.22 1.98 2.806 2 1 1 0 592.3285 1103.6825 S923s TMT10 921 (R) TAsAPAK (G) T(0.0)AS(0.99)APAK K:TMT10,s:Phosphorylated S PLCH1 191330.6 5 5 201.1 451.38 HUMAN 1 31.5277 9.5442 RILRSRRSPLLKSGP-p O95235;S878-p RILRSRRSPLLKSGP 0.998180995519267 0.0028480387803829 -0.000333333333333343 -1.00066666666667 0.0121741148227307 38.5118938228991 -0.000333333333333346 -1.00066666666667 0.997200731747236 0.000140867438546657 -0.00367333253494481 -9.48176597041941 O95235 KIF20A O95235.S878.p_KIF20A O95235_S878s _1_1_878_878 O95235 O95235 Kinesin-like protein KIF20A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4417.4417.3 9.27 9.27 1.958 2 1 1 0 422.5813 1185.7629 S878s Hydrogen 875 (R) SRRsPLLK (S) S(0.0)RRS(0.99)PLLK K:TMT10-Lys-Only,s:Phosphorylated S KIF20A 101303.1 1 11 845.1 213.8 HUMAN 1 -0.0122 -38.5119 RILRVNLSPVIRLQP-p Q8IV32;S453-p RILRVNLSPVIRLQP 0.977778909000874 0.0173223641138069 -0.00466666666666667 -0.374 0.192781486764438 24.3023698436213 -0.00466666666666667 -0.374 0.956581222100514 0.00371332546299135 -0.0570125933696002 -4.86338039274958 Q8IV32 CCDC71 Q8IV32.S453.p_CCDC71 Q8IV32_S453s _1_1_453_453 Q8IV32 Q8IV32 Coiled-coil domain-containing protein 71 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20896.20896.2 11.28 11.28 99 1 1 1 0 603.8444 1126.7146 S453s TMT10 450 (R) VNLsPVIR (L) VNLS(1.0)PVIR s:Phosphorylated S CCDC71 49818.4 2 4 3496.1 49.75 HUMAN 1 -0.1928 -24.3024 RILSTMDSPST____-p Q13085;S2343-p RILSTMDSPST____ 0.295243174589512 0.917335215622243 0.186333333333333 -0.011 9.97943203581383 0.527570873403864 0.186333333333333 -0.011 0.100474718110313 0.88561081742914 1.97813730876907 -0.15076575575108 Q13085 ACACA Q13085.S2343.p_ACACA Q13085_S2343s _1_1_2343_2343 Q13085 Q13085-4|Q13085-2|Q13085-3 Acetyl-CoA carboxylase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21612.21612.2 7.85 7.85 1.186 5 1 1 0 680.818 1280.6605 S2343s TMT10 2337 (R) ILSTMDsPST (-) ILS(0.0)T(0.0)MDS(0.99)PS(0.0)T(0.0) s:Phosphorylated S ACACA 267260.7 2 10 860.1 210.55 HUMAN 1 9.9794 -0.5276 RILVTGGSGLVGKAI-p Q13630;S16-p RILVTGGSGLVGKAI 0.895863012427936 0.877206448607223 0.0226666666666667 0.0186666666666667 0.935314121906045 0.799465419904977 0.0226666666666666 0.0186666666666667 0.806247883947558 0.831866160550716 0.257573011433083 0.222769907801857 Q13630 TSTA3 Q13630.S16.p_TSTA3 Q13630_S16s _1_1_16_16 Q13630 Q13630|E9PP60 GDP-L-fucose synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24522.24522.2 13.07 9.37 2.272 2 1 1 0 819.9828 1558.9933 S16s TMT10 10 (R) ILVTGGsGLVGK (A) ILVT(0.0)GGS(0.99)GLVGK K:TMT10,s:Phosphorylated S TSTA3 36120.2 1 1 6214.1 13.07 HUMAN 1 0.9353 0.7995 RILWRRPSQPAVHRD-p Q0PNE2;S233-p RILWRRPSQPAVHRD 0.755909916805024 0.0117297467150433 -0.128333333333333 -0.48 2.32410173673049 26.9896550555109 -0.128333333333333 -0.48 0.585584841925729 0.00200002071777753 -0.579437799532778 -5.55832832882502 Q0PNE2 ELP6 Q0PNE2.S233.p_ELP6 Q0PNE2_S233s _1_1_233_233 Q0PNE2 Q0PNE2|C9IYN7 Elongator complex protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3300.3300.3 10.22 9.21 99 1 1 1 0 452.9086 1276.7436 S233s TMT10 231 (R) RPsQPAVHR (D) RPS(1.0)QPAVHR s:Phosphorylated S ELP6 30135.1 1 1 6672.1 10.22 HUMAN 1 -2.3241 -26.9897 RIMGPNYTPGKKEDL-p P13639;T435-p RIMGPNYTPGKKEDL 0.169333466748667 0.740657160494163 -0.432 0.0406666666666667 15.3867130528394 1.79768629788365 -0.432 0.0406666666666667 0.0289286851448793 0.661045525954291 -2.95129911214908 0.463465120571184 P13639 EEF2 P13639.T435.p_EEF2 P13639_T435t _1_1_435_435 P13639 P13639 Elongation factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20724.20724.5 16.47 9.84 3.965 3 1 1 0 692.395 3377.9789 T435t TMT10 429 (R) IMGPNYtPGKKEDLYLKPIQR (T) IMGPNY(0.0)T(0.99)PGKKEDLY(0.0)LKPIQR K:TMT10,t:Phosphorylated T EEF2 96306.4 8 7 693.1 242.75 HUMAN 1 -15.3867 1.7977 RIMVQSASPDIRVTR-p Q9NQT8;S1497-p RIMVQSASPDIRVTR 0.9858344442218 0.0268584189891589 -0.00466666666666667 -0.352333333333333 0.125589176691362 21.3239450395395 -0.00466666666666668 -0.352333333333333 0.971496146606859 0.00737234237828406 -0.0374143470633414 -4.16479053272638 Q9NQT8 KIF13B Q9NQT8.S1497.p_KIF13B Q9NQT8_S1497s _1_1_1497_1497 Q9NQT8 Q9NQT8 Kinesin-like protein KIF13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16505.16505.2 15.57 8.44 2.111 2 1 1 0 763.3858 1445.7984 S1497s TMT10 1491 (R) IMVQSAsPDIR (V) IMVQS(0.0)AS(0.99)PDIR s:Phosphorylated S KIF13B 204097.3 2 12 335.1 355.82 HUMAN 1 -0.1256 -21.3239 RINENEKSPSQNRKA-p Q9UM11-2;S70-p RINENEKSPSQNRKA 0.472422836600032 0.214706555239068 0.13 0.170333333333333 6.00568023900253 8.79098439388951 0.13 0.170333333333333 0.250860322411499 0.132099617655932 1.2855754178209 1.77156085468462 Q9UM11 FZR1 Q9UM11.2.S70.p_FZR1 Q9UM11-2_S70s _1_1_70_70 Q9UM11-2 Q9UM11|Q9UM11-2|Q9UM11-3|K7EQT1 Isoform 2 of Fizzy-related protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5584.5584.3 12.02 12.02 10.327 2 1 1 0 651.9973 1874.0132 S70s TMT10 64 (R) INENEKsPSQNR (K) INENEKS(0.99)PS(0.0)QNR K:TMT10,s:Phosphorylated S FZR1 55164.2 4 3 2691.1 73.84 HUMAN 1 6.0057 8.791 RINLCIHSEEEDMNL-p P41002;S774-p RINLCIHSEEEDMNL 0.472747504381845 0.0529355983987602 0.138666666666667 -0.418 5.99636087971507 17.0232499437367 0.138666666666667 -0.418 0.251399211973236 0.0198460922447022 1.28391527364398 -3.2647235427123 P41002 CCNF P41002.S774.p_CCNF P41002_S774s _1_1_774_774 P41002 P41002 Cyclin-F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21469.21469.4 18.09 18.09 99 1 1 1 0 652.5701 2527.2958 S774s TMT10 767 (K) RINLCIHsEEEDMNLGLVR (L) RINLCIHS(1.0)EEEDMNLGLVR C:Carbamidomethylation,s:Phosphorylated S CCNF 89464 4 3 2951.1 64.9 HUMAN 1 5.9964 -17.0232 RINLVNRSWCYK___-p P51955-2;S380-p RINLVNRSWCYK___ 0.643480349856784 0.00441986327131149 -0.101 -0.564333333333333 3.57914215736067 34.5932487281799 -0.101 -0.564333333333333 0.438617327355359 0.000347276285165262 -0.835775875197079 -7.94566840664968 P51955 NEK2 P51955.2.S380.p_NEK2 P51955-2_S380s _1_1_380_380 P51955-2 P51955-2 Isoform 2 of Serine/threonine-protein kinase Nek2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21007.21007.3 15.68 15.68 15.679 2 1 1 0 664.3486 1911.0675 S380s TMT10 374 (R) INLVNRsWCYK (-) INLVNRS(0.99)WCY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NEK2 45304.1 1 3 4033.1 38.85 HUMAN 1 -3.5791 -34.5932 RINPYMSSPCHIEMI-p P18621-3;S142-p RINPYMSSPCHIEMI 0.977130047691108 0.943694718302573 0.00466666666666665 -0.00866666666666664 0.198857289630276 0.361504206600176 0.00466666666666665 -0.00866666666666663 0.955243895572271 0.920130823384701 0.0587709788112258 -0.105026391705711 P18621 RPL17 P18621.3.S142.p_RPL17 P18621-3_S142s _1_1_142_142 P18621-3 P18621-3|A0A0A0MRF8|J3QLC8|P18621-2 Isoform 3 of 60S ribosomal protein L17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29844.29844.2 17.67 17.67 1.163 4 1 1 0 1351.1627 2621.3542 S142s TMT10 136 (R) INPYMSsPCHIEMILTEK (E) INPY(0.0)MS(0.0)S(0.99)PCHIEMILT(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RPL17 26714.6 16 1 5616.1 17.67 HUMAN 1 0.1989 -0.3615 RINSSGESGDESDEF-p O60841;S186-p RINSSGESGDESDEF 0.74843463214063 0.0865648874746129 0.0563333333333333 0.331666666666667 2.39186431285488 14.0679126337517 0.0563333333333333 0.331666666666667 0.576518925738323 0.039193020676592 0.593934885189169 2.70376442492785 O60841 EIF5B O60841.S186.p_EIF5B O60841_S182sS183sS186s_3_3_182_186 O60841 O60841|A0A087WUT6 Eukaryotic translation initiation factor 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.14289.14918.2 9.22 9.22 5.101 5 3 3 0 1098.8745 1956.8417 S182s S183s S186s Hydrogen 180 (R) INssGEsGDESDEFLQSR (K) INS(0.99)S(0.99)GES(0.99)GDES(0.0)DEFLQS(0.0)R s:Phosphorylated S EIF5B 139280.8 9 19 113.1 571.22 HUMAN 1 2.3919 14.0679 RIPNYQLSPTKLPSI-p O60934;S432-p RIPNYQLSPTKLPSI 0.369204116317882 0.00117984223282173 -0.180666666666667 -1.12866666666667 8.0267242354813 48.361553102803 -0.180666666666667 -1.12866666666667 0.157517052455361 1.45829265948667e-05 -1.63979624930657 -14.6166899378387 O60934 NBN O60934.S432.p_NBN O60934_S432s _1_1_432_432 O60934 O60934|A0A0C4DG07 Nibrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21572.21572.3 17.15 17.15 2.361 4 1 1 0 784.4441 2271.3477 S432s Hydrogen 426 (R) IPNYQLsPTKLPSINK (S) IPNY(0.0)QLS(0.99)PT(0.0)KLPS(0.0)INK K:TMT10-Lys-Only,s:Phosphorylated S NBN 85642.2 18 8 562.1 271.59 HUMAN 1 -8.0267 -48.3616 RIPRPSVSQGCSREA-p E3W994;S525-p RIPRPSVSQGCSREA 0.928692176788334 0.0176663353129441 0.023 0.382666666666667 0.637603403492407 24.1475550987841 0.023 0.382666666666667 0.863454902457717 0.00384808352523822 0.180329726624371 4.82531167005308 E3W994 NotFound E3W994.S525.p_NotFound E3W994_S525s _1_1_525_525 E3W994 O75122-3|E7EW49|E7ERI8|A0A0U1RQI6|J3KR49|E3W994 CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8620.8825.3 11.66 11.66 1.38 3 1 1 0 551.6103 1572.8478 S525s TMT10 519 (R) IPRPSVsQGCSR (E) IPRPS(0.0)VS(0.99)QGCS(0.0)R C:Carbamidomethylation,s:Phosphorylated S CLASP2 139660.6 2 12 158.1 498.15 HUMAN 1 0.6376 24.1476 RIPSIVSSPLNSPLD-p P49790-3;S334-p RIPSIVSSPLNSPLD 0.450399926319744 0.280859330814252 -0.115333333333333 -0.126 6.3988087372705 7.26717689607542 -0.115333333333333 -0.126 0.229149612024422 0.187621373266901 -1.35531057173134 -1.50727234000375 P49790 NUP153 P49790.3.S334.p_NUP153 P49790-3_S334sS338s_2_2_334_338 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23367.23367.3 8.81 8.81 1.15 4 2 2 0 714.0302 1980.1439 S334s S338s TMT10 327 (K) RIPSIVSsPLNsPLDR (S) RIPS(0.0)IVS(0.0)S(0.99)PLNS(0.99)PLDR s:Phosphorylated S NUP153 158989.2 16 46 64.1 696.53 HUMAN 1 -6.3988 -7.2672 RIPYPGRSPQDLAST-p Q9HC52;S110-p RIPYPGRSPQDLAST 0.522052848374207 0.85554001149252 -0.119 -0.028 5.21907977017473 0.95560728624303 -0.119 -0.028 0.300671332987158 0.802489338675346 -1.14405829105411 -0.262679891410192 Q9HC52 CBX8 Q9HC52.S110.p_CBX8 Q9HC52_S110s _1_1_110_110 Q9HC52 Q9HC52 Chromobox protein homolog 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16264.16264.4 15.25 15.25 5.388 5 1 1 0 595.8143 2300.2672 S110s TMT10 101 (R) GIRIPYPGRsPQDLASTSR (A) GIRIPY(0.0)PGRS(0.99)PQDLAS(0.0)T(0.0)S(0.0)R s:Phosphorylated S CBX8 43509.1 3 1 1574.1 130.51 HUMAN 1 -5.2191 -0.9556 RIQAAASTPTNATAA-p P49841-2;T403-p RIQAAASTPTNATAA 0.517913844218022 0.83761401175647 0.168 0.037 5.27825148507561 1.08084025980572 0.168 0.037 0.296602530191921 0.779679245951016 1.15481342952984 0.294005929206022 P49841 GSK3B P49841.2.T403.p_GSK3B P49841-2_T403t _1_1_403_403 P49841-2 P49841-2 Isoform 2 of Glycogen synthase kinase-3 beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9590.9590.4 11.62 11.62 1.211 12 1 1 0 944.4317 3694.7338 T403t TMT10 397 (R) IQAAAStPTNATAASDANTGDRGQTNNAASASASNST (-) IQAAAS(0.0)T(0.99)PT(0.0)NAT(0.0)AAS(0.0)DANT(0.0)GDRGQT(0.0)NNAAS(0.0)AS(0.0)AS(0.0)NS(0.0)T(0.0) t:Phosphorylated T GSK3B 48546.3 1 7 1908.2 107.94 HUMAN 1 5.2783 1.0808 RIQDYDVSLDKALDE-p Q93009;S752-p RIQDYDVSLDKALDE 0.287785082952937 0.00789155146769577 -0.240666666666667 0.455666666666667 10.2009987225947 29.9927346479341 -0.240666666666667 0.455666666666667 0.095477299699724 0.00100167430922935 -2.01665345594674 6.4197409186128 Q93009 USP7 Q93009.S752.p_USP7 Q93009_S752s _1_1_752_752 Q93009 Q93009|Q93009-3 Ubiquitin carboxyl-terminal hydrolase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19782.19782.2 12.9 6.63 6.019 2 1 1 0 867.443 1653.91 S752s TMT10 746 (R) IQDYDVsLDK (A) IQDY(0.0)DVS(0.99)LDK K:TMT10,s:Phosphorylated S USP7 129383.8 2 5 1927.1 106.49 HUMAN 1 -10.201 29.9927 RIQEQESSGEEDSDL-p P41236;S122-p RIQEQESSGEEDSDL 0.993608271974075 0.0167192170849026 0.00133333333333333 0.376 0.0593667335745678 24.5276885636577 0.00133333333333333 0.376 0.9864233104434 0.00352558462562742 0.0178170451195059 4.91915179604891 P41236 PPP1R2 P41236.S122.p_PPP1R2 P41236_S122s _1_1_122_122 P41236 P41236|Q6NXS1|G1AUC5 Protein phosphatase inhibitor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11378.11378.3 17.23 17.23 1.108 4 1 1 0 825.0232 2393.079 S122s TMT10 116 (R) IQEQESsGEEDSDLSPEER (E) IQEQES(0.0)S(0.99)GEEDS(0.0)DLS(0.0)PEER s:Phosphorylated S PPP1R2 23071.9 8 4 717.1 237.75 HUMAN 1 0.0594 24.5277 RIQKDGFSPCCPGWS-p Q5LJA5;S214-p RIQKDGFSPCCPGWS 0.67602030576956 0.117356489069572 -0.0703333333333333 0.167333333333333 3.18540053432898 12.2668805702511 -0.0703333333333333 0.167333333333333 0.480241787208049 0.0593351361149539 -0.757824115424804 2.37854517723462 Q5LJA5 NotFound Q5LJA5.S214.p_NotFound Q5LJA5_S214s _1_1_214_214 Q5LJA5 Q5LJA5 Ubiquitin carboxyl-terminal hydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27608.27608.4 13.18 13.18 1.636 4 1 1 0 929.4494 3634.8311 S214s TMT10 211 (K) DGFsPCCPGWSQTPELKPSACLDLPK (W) DGFS(0.99)PCCPGWS(0.0)QT(0.0)PELKPS(0.0)ACLDLPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UCHL5 40878.9 1 1 4415.2 31.76 HUMAN 1 -3.1854 12.2669 RIRTPSYSPTQRSPG-p Q03164-3;S2154-p RIRTPSYSPTQRSPG 0.585929527943446 0.0161628646769468 -0.106666666666667 -0.453333333333333 4.26864444384746 24.7359493088321 -0.106666666666667 -0.453333333333333 0.374227377014146 0.00336050904848418 -0.968145387044469 -4.97109092553923 Q03164 KMT2A Q03164.3.S2154.p_KMT2A Q03164-3_S2154s _1_1_2154_2154 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6592.6592.3 9.14 9.14 2.032 5 1 1 0 449.2164 1265.6687 S2154s TMT10 2150 (R) TPSYsPTQR (S) T(0.0)PS(0.0)Y(0.0)S(0.99)PT(0.0)QR s:Phosphorylated S KMT2A 436608.3 2 27 26.1 936.8 HUMAN 1 -4.2686 -24.7359 RIRTRRQSSGSATNV-p Q7Z460-4;S662-p RIRTRRQSSGSATNV 0.195369518145262 0.0892422400562561 -0.258333333333333 0.185333333333333 13.8278892161101 13.8869359389183 -0.258333333333333 0.185333333333333 0.0414200938311464 0.0408607567979912 -2.66137272295972 2.67059675715323 Q7Z460 CLASP1 Q7Z460.4.S662.p_CLASP1 Q7Z460-4_S662s _1_1_662_662 Q7Z460-4 Q7Z460|Q7Z460-3|Q7Z460-5|F8WA11|Q7Z460-4|Q7Z460-2 Isoform 4 of CLIP-associating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3576.3576.2 18.69 13.49 1.104 6 1 1 0 914.4034 1747.8318 S662s Hydrogen 660 (R) RQsSGSATNVASTPDNR (G) RQS(0.99)S(0.0)GS(0.0)AT(0.0)NVAS(0.0)T(0.0)PDNR s:Phosphorylated S CLASP1 164028.5 3 41 158.3 498.15 HUMAN 1 -13.8279 13.8869 RISGLGLTPEQKQKK-p O95831;T105-p RISGLGLTPEQKQKK 0.0891404210042399 0.121235250561901 0.398333333333333 -0.215 22.3581361293374 12.0826222031511 0.398333333333333 -0.215 0.00581013718887307 0.0619067178989772 4.4043099069553 -2.34581810453766 O95831 AIFM1 O95831.T105.p_AIFM1 O95831_T105t _1_1_105_105 O95831 O95831|O95831-3|O95831-4|O95831-6 Apoptosis-inducing factor 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22034.22034.3 12.9 12.9 5.713 2 1 1 0 560.9838 1600.9674 T105t TMT10 99 (R) ISGLGLtPEQK (Q) IS(0.0)GLGLT(0.99)PEQK K:TMT10,t:Phosphorylated T AIFM1 67184.7 1 1 1056.1 182.66 HUMAN 1 22.3581 -12.0826 RISHTPQTPLYTPER-p Q7Z2Z1;T1130-p RISHTPQTPLYTPER 0.202791717001177 0.0546575861182109 -0.379666666666667 -0.632 13.4425143387096 16.8265373902454 -0.379666666666667 -0.632 0.0452635451695056 0.0207656849604128 -2.59111978552918 -3.22612050464131 Q7Z2Z1 TICRR Q7Z2Z1.T1130.p_TICRR Q7Z2Z1_T1130t _1_1_1130_1130 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11587.11587.3 14.38 14.38 1.171 5 1 1 0 650.3289 1869.0068 T1130t TMT10 1124 (R) ISHTPQtPLYTPER (L) IS(0.0)HT(0.0)PQT(0.99)PLY(0.0)T(0.0)PER t:Phosphorylated T TICRR 212850 1 13 238.1 417.32 HUMAN 1 -13.4425 -16.8265 RISSRKLSEECNSLS-p Q9NYY8;S160-p RISSRKLSEECNSLS 0.320322868816563 0.162363007791104 -0.143 0.145666666666667 9.25403968264987 10.3802094861345 -0.143 0.145666666666667 0.11873972307669 0.0916176296408334 -1.85234766565866 2.04698674091465 Q9NYY8 FASTKD2 Q9NYY8.S160.p_FASTKD2 Q9NYY8_S160s _1_1_160_160 Q9NYY8 Q9NYY8|Q9NYY8-2 FAST kinase domain-containing protein 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.31432.31432.4 16.29 13.74 2.628 4 1 1 0 703.1129 2729.4635 S160s TMT10 158 (R) KLsEECNSLSDVLDAFSK (A) KLS(0.99)EECNS(0.0)LS(0.0)DVLDAFS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S FASTKD2 82431.4 2 2 2990.1 63.94 HUMAN 1 -9.254 10.3802 RISSSSFSRVGSSNF-p P05787;S39-p RISSSSFSRVGSSNF 0.80621185033956 0.232855151464391 0.074 -0.207666666666667 1.80432769079225 8.33638728067702 0.074 -0.207666666666667 0.66003540308035 0.146676747786634 0.465019330514221 -1.69290978565834 P05787 KRT8 P05787.S39.p_KRT8 P05787_S39s _1_1_39_39 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14990.14990.3 7.87 7.87 1.447 7 1 1 0 642.9818 1846.9609 S39s TMT10 33 (R) ISSSSFsRVGSSNFR (G) IS(0.0)S(0.0)S(0.0)S(0.0)FS(0.99)RVGS(0.0)S(0.0)NFR s:Phosphorylated S KRT8 53703.3 1 13 69.1 672.47 HUMAN 1 1.8043 -8.3364 RISVVDYSYLEGDLP-p Q5SWA1;S407-p RISVVDYSYLEGDLP 0.0948633510902073 0.0155267569080944 -0.329333333333333 -0.628333333333333 21.7419230933293 25.0070148117474 -0.329333333333333 -0.628333333333333 0.00669588044413911 0.00315717400861248 -4.26316189726495 -5.03926169832963 Q5SWA1 NotFound Q5SWA1.S407.p_NotFound Q5SWA1_S407s _1_1_407_407 Q5SWA1 Q5SWA1 Protein phosphatase 1 regulatory subunit 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29879.29879.4 18.34 18.12 1.791 6 1 1 0 798.9044 3112.6389 S407s TMT10 401 (R) ISVVDYsYLEGDLPISARPACSNK (L) IS(0.0)VVDY(0.0)S(0.99)Y(0.0)LEGDLPIS(0.0)ARPACS(0.0)NK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PPP1R15B 80120 1 1 2384.1 85.62 HUMAN 1 -21.7419 -25.007 RISYQRDSDENLTDA-p Q69YH5;S210-p RISYQRDSDENLTDA 0.878395260815069 0.00558647090816774 -0.025 -0.604666666666667 1.10723382021825 32.6493944352621 -0.025 -0.604666666666667 0.7749552378658 0.000543326085662658 -0.300564747443617 -7.26762117657167 Q69YH5 CDCA2 Q69YH5.S210.p_CDCA2 Q69YH5_S210s _1_1_210_210 Q69YH5 Q69YH5|E9PEI0 Cell division cycle-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13161.13161.3 15 15 2.734 4 1 1 0 827.0648 2399.2091 S210s TMT10 204 (R) ISYQRDsDENLTDAEGK (V) IS(0.0)Y(0.0)QRDS(0.99)DENLT(0.0)DAEGK K:TMT10,s:Phosphorylated S CDCA2 114214.8 1 4 407.1 324.13 HUMAN 1 -1.1072 -32.6494 RITFPVRSGKGKKRK-p O60306;S755-p RITFPVRSGKGKKRK 0.89100765848779 0.587748922481853 0.024 -0.0513333333333333 0.979015724327005 3.11884046941596 0.024 -0.0513333333333333 0.798175563563508 0.487658673582783 0.26860642830179 -0.744341612175363 O60306 AQR O60306.S755.p_AQR O60306_S755s _1_1_755_755 O60306 O60306 Intron-binding protein aquarius HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16493.16493.3 9.88 9.88 9.877 2 1 1 0 514.966 1462.9146 S755s TMT10 749 (R) ITFPVRsGK (G) IT(0.0)FPVRS(0.99)GK K:TMT10,s:Phosphorylated S AQR 172376.2 1 2 4471.1 30.94 HUMAN 1 0.979 -3.1188 RITFTQPS_______-p Q8IY18;S1101-p RITFTQPS_______ 0.693549863312391 0.768932504357497 0.055 -0.0756666666666667 2.98126820240708 1.57813334631821 0.055 -0.0756666666666667 0.503353600827138 0.695323112210534 0.716605085273625 -0.413163778479743 Q8IY18 SMC5 Q8IY18.S1101.p_SMC5 Q8IY18_S1101s _1_1_1101_1101 Q8IY18 Q8IY18 Structural maintenance of chromosomes protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13645.13645.2 8.32 8.32 8.323 3 1 1 0 629.8243 1178.6731 S1101s TMT10 1094 (R) RITFTQPs (-) RIT(0.0)FT(0.0)QPS(0.99) s:Phosphorylated S SMC5 130059.4 1 4 2154.1 95.46 HUMAN 1 2.9813 -1.5781 RITRKPMSWHDNLEE-p Q6ZVS7;S54-p RITRKPMSWHDNLEE 0.317830463090635 0.466348374421823 0.182 0.311666666666667 9.32191260743342 4.4174244619499 0.182 0.311666666666667 0.116898446373923 0.361624256548413 1.86410306088557 0.995944098884138 Q6ZVS7 NotFound Q6ZVS7.S54.p_NotFound Q6ZVS7_S54s _1_1_54_54 Q6ZVS7 Q6ZVS7 Protein FAM183BP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37089.37089.4 7.42 0.85 7.424 2 1 1 0 1048.5499 4111.1903 S54s TMT10 51 (R) KPMsWHDNLEEPADARFLNLIHHAAQGPTK (K) KPMS(0.99)WHDNLEEPADARFLNLIHHAAQGPT(0.0)K K:TMT10,s:Phosphorylated S FAM183BP 16193 1 1 7165.1 7.42 HUMAN 1 9.3219 4.4174 RITSVIPSPPPPPPL-p O15085-2;S150-p RITSVIPSPPPPPPL 0.716278239111013 0.396403236208669 0.081 0.0816666666666667 2.73340643587397 5.34330902503148 0.081 0.0816666666666667 0.532916732494379 0.292192522357483 0.665723717474412 1.16636601706378 O15085 ARHGEF11 O15085.2.S150.p_ARHGEF11 O15085-2_S150s _1_1_150_150 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27255.27674.3 14.28 14.28 4.011 3 1 1 0 766.0941 2216.3004 S150s TMT10 144 (R) ITSVIPsPPPPPPLPPPQR (I) IT(0.0)S(0.0)VIPS(0.99)PPPPPPLPPPQR s:Phosphorylated S ARHGEF11 173153.4 1 2 228.1 424.05 HUMAN 1 2.7334 5.3433 RIVALDRSFHIGCYK-p Q15654;S424-p RIVALDRSFHIGCYK 0.112193120608589 0.0683902820958578 -0.46 -0.494333333333333 19.8449234423974 15.499381619283 -0.46 -0.494333333333333 0.0103635287313934 0.0281878426211598 -3.84574803097869 -2.97062776617955 Q15654 TRIP6 Q15654.S424.p_TRIP6 Q15654_S424s _1_1_424_424 Q15654 Q15654 Thyroid receptor-interacting protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22652.22652.4 14.42 14.42 3.433 2 1 1 0 555.0472 2137.1992 S424s TMT10 418 (R) IVALDRsFHIGCYK (C) IVALDRS(0.99)FHIGCY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TRIP6 51770.4 1 3 2633.1 75.83 HUMAN 1 -19.8449 -15.4994 RIVASTLSNPELFEE-p P17174;S312-p RIVASTLSNPELFEE 0.853818308024502 0.482257721527163 0.0313333333333333 0.0833333333333334 1.33076623650843 4.22790738384804 0.0313333333333333 0.0833333333333334 0.736077218111336 0.377754165158111 0.354906564497943 0.960281714635867 P17174 GOT1 P17174.S312.p_GOT1 P17174_S312s _1_1_312_312 P17174 P17174|P17174-2 Aspartate aminotransferase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.34226.34226.3 17.69 13.49 2.289 4 1 1 0 924.8139 2692.4598 S312s TMT10 306 (R) IVASTLsNPELFEEWTGNVK (T) IVAS(0.0)T(0.0)LS(0.99)NPELFEEWT(0.0)GNVK K:TMT10,s:Phosphorylated S GOT1 46474.8 3 2 4359.1 32.8 HUMAN 1 1.3308 4.2279 RIVEDDASISSCNKL-p Q7Z5K2-2;S199-p RIVEDDASISSCNKL 0.936234507605524 0.487117694092726 0.0186666666666667 -0.112333333333333 0.557766762822449 4.17329892053315 0.0186666666666667 -0.112333333333333 0.879474645664776 0.382534058326594 0.15894697921835 -0.949948193098892 Q7Z5K2 WAPL Q7Z5K2.2.S199.p_WAPL Q7Z5K2-2_S199s _1_1_199_199 Q7Z5K2-2 Q7Z5K2-3|Q7Z5K2-2 Isoform 2 of Wings apart-like protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14690.14690.3 9.65 9.65 1.434 3 1 1 0 659.3206 1895.9785 S199s TMT10 193 (R) IVEDDAsISSCNK (L) IVEDDAS(0.99)IS(0.0)S(0.0)CNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WAPL 138966.1 1 5 244.1 413.16 HUMAN 1 0.5578 -4.1733 RIVERALSEQINIFF-p Q13409-2;S232-p RIVERALSEQINIFF 0.953628443834147 0.885975881230125 0.009 0.0203333333333334 0.404577510029737 0.738767597881271 0.009 0.0203333333333334 0.911050076647311 0.843574105733241 0.117039574812368 0.206983419477484 Q13409 DYNC1I2 Q13409.2.S232.p_DYNC1I2 Q13409-2_S232s _1_1_232_232 Q13409-2 Q13409|Q13409-5|Q13409-2|Q13409-7|Q13409-3|Q13409-6 Isoform 2B of Cytoplasmic dynein 1 intermediate chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32174.32174.4 13.54 13.54 1.575 3 1 1 0 1003.5121 3931.0692 S232s TMT10 230 (R) ALsEQINIFFDYSGRDLEDKEGEIQAGAK (L) ALS(0.99)EQINIFFDY(0.0)S(0.0)GRDLEDKEGEIQAGAK K:TMT10,s:Phosphorylated S DYNC1I2 71042.8 1 8 1616.1 127.25 HUMAN 1 0.4046 0.7388 RIVHLSNSFTQTVNC-p Q8TCG2;S466-p RIVHLSNSFTQTVNC 0.239911948391928 0.531485603378975 -0.350333333333333 -0.178 11.8485761751889 3.69012338324152 -0.350333333333333 -0.178 0.065334471515266 0.427550739244896 -2.30550470218616 -0.857275592263064 Q8TCG2 PI4K2B Q8TCG2.S466.p_PI4K2B Q8TCG2_S466s _1_1_466_466 Q8TCG2 Q8TCG2 Phosphatidylinositol 4-kinase type 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17501.17501.3 17.39 17.39 2.535 4 1 1 0 695.677 2005.0487 S466s TMT10 460 (R) IVHLSNsFTQTVNCR (K) IVHLS(0.0)NS(0.99)FT(0.0)QT(0.0)VNCR C:Carbamidomethylation,s:Phosphorylated S PI4K2B 55256.7 1 3 3756.1 43.8 HUMAN 1 -11.8486 -3.6901 RIVNHWASPELRQNP-p J3KNL6;S314-p RIVNHWASPELRQNP 0.662794592000247 0.0439275347453347 0.0623333333333333 -0.259 3.34379042343508 18.1803216499887 0.0623333333333333 -0.259 0.463042610269981 0.0152043491812788 0.789415381550661 -3.49595299061788 J3KNL6 SEC16A J3KNL6.S314.p_SEC16A J3KNL6_S314s _1_1_314_314 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16769.16769.2 16.91 16.91 99 1 1 1 0 815.9187 1550.8641 S314s TMT10 308 (R) IVNHWAsPELR (Q) IVNHWAS(1.0)PELR s:Phosphorylated S SEC16A 253486.5 8 8 15.1 1143.82 HUMAN 1 3.3438 -18.1803 RIVPEEPSDSEKDLS-p Q5SWA1;S508-p RIVPEEPSDSEKDLS 0.0394708703166875 0.0364477443114034 -0.801 -0.276666666666667 31.5920076184406 19.351198466389 -0.801 -0.276666666666667 0.000693105329296026 0.0116112814808687 -6.93150421839497 -3.73771966821012 Q5SWA1 NotFound Q5SWA1.S508.p_NotFound Q5SWA1_S508s _1_1_508_508 Q5SWA1 Q5SWA1 Protein phosphatase 1 regulatory subunit 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15462.15462.2 13.53 5.81 2.447 2 1 1 0 884.445 1687.9155 S508s TMT10 502 (R) IVPEEPsDSEK (D) IVPEEPS(0.99)DS(0.0)EK K:TMT10,s:Phosphorylated S PPP1R15B 80120 2 2 2384.1 85.62 HUMAN 1 -31.592 -19.3512 RIVVKLGSAVVTRGD-p P54886;S79-p RIVVKLGSAVVTRGD 0.885959515148723 0.00898490162031833 0.0276666666666667 0.428666666666667 1.03266783933614 28.9824548891455 0.0276666666666667 0.428666666666667 0.788375675410097 0.00126402164573736 0.282052855889336 6.11914005359243 P54886 ALDH18A1 P54886.S79.p_ALDH18A1 P54886_S79s _1_1_79_79 P54886 P54886|P54886-2 Delta-1-pyrroline-5-carboxylate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18783.18783.3 14.08 14.08 3.202 2 1 1 0 714.0295 2060.112 S79s TMT10 77 (K) LGsAVVTRGDECGLALGR (L) LGS(0.99)AVVT(0.0)RGDECGLALGR C:Carbamidomethylation,s:Phosphorylated S ALDH18A1 88042.4 2 1 2259.1 91 HUMAN 1 1.0327 28.9825 RIYSPVRSPSARFER-p Q5VTI5;S496-p RIYSPVRSPSARFER 0.916759627200909 0.40921289225276 0.016 0.0783333333333333 0.736511566253312 5.16443165331668 0.016 0.0783333333333334 0.844012431417282 0.30447864249811 0.206413283331893 1.13387183270554 Q5VTI5 NotFound Q5VTI5.S496.p_NotFound Q5VTI5_S496s _1_1_496_496 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10076.10076.3 13.66 13.66 2.572 4 1 1 0 514.6062 1461.8375 S496s TMT10 490 (R) IYSPVRsPSAR (F) IY(0.0)S(0.0)PVRS(0.99)PS(0.0)AR s:Phosphorylated S PLEKHA6 119745.7 5 18 52.1 743.36 HUMAN 1 0.7365 5.1644 RIYVGNASVAQDIPK-p P51452;S43-p RIYVGNASVAQDIPK 0.745259665546982 0.62217190871681 0.0636666666666666 0.063 2.42351343531921 2.80122604156377 0.0636666666666667 0.063 0.572332827315967 0.524659324601831 0.600675735513388 0.67964974356333 P51452 DUSP3 P51452.S43.p_DUSP3 P51452_S43s _1_1_43_43 P51452 P51452 Dual specificity protein phosphatase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23016.23016.3 14.01 11.27 14.01 2 1 1 0 671.699 1933.1159 S43s TMT10 37 (R) IYVGNAsVAQDIPK (L) IY(0.0)VGNAS(0.99)VAQDIPK K:TMT10,s:Phosphorylated S DUSP3 20706.1 1 1 4696.1 27.83 HUMAN 1 2.4235 2.8012 RKAEDSDSEPEPEDN-p Q9H0D6;S501-p RKAEDSDSEPEPEDN 0.581707096197332 0.0906944030027999 -0.0913333333333333 0.225 4.32958124869097 13.7920379275386 -0.0913333333333334 0.225 0.369013177493688 0.0417634345676466 -0.979628042365093 2.65325206068628 Q9H0D6 XRN2 Q9H0D6.S501.p_XRN2 Q9H0D6_S499sS501s_2_2_499_501 Q9H0D6 Q9H0D6|Q9H0D6-2 5'-3' exoribonuclease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23161.23375.4 18.77 12.89 99 2 2 2 0 827.1265 3145.5478 S499s S501s Hydrogen 495 (R) KAEDsDsEPEPEDNVRLWEAGWK (Q) KAEDS(1.0)DS(1.0)EPEPEDNVRLWEAGWK K:TMT10-Lys-Only,s:Phosphorylated S XRN2 109493.4 58 13 608.1 262.16 HUMAN 1 -4.3296 13.792 RKAEQPASPLQDAEG-p O60303;S368-p RKAEQPASPLQDAEG 0.611699205410215 0.382834402822501 -0.120333333333333 0.118666666666667 3.95677380821843 5.5399237480152 -0.120333333333333 0.118666666666667 0.402089395300648 0.279259287222639 -0.90885783197212 1.20188083493018 O60303 KIAA0556 O60303.S368.p_KIAA0556 O60303_S368s _1_1_368_368 O60303 O60303 Protein KIAA0556 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12765.12765.3 19.54 19.54 99 1 1 1 0 867.8024 2521.4229 S368s TMT10 362 (R) KAEQPAsPLQDAEGPPAK (P) KAEQPAS(1.0)PLQDAEGPPAK K:TMT10,s:Phosphorylated S KIAA0556 182055.4 1 2 1063.1 181.85 HUMAN 1 -3.9568 5.5399 RKAGIFQSVK_____-p P09669;S73-p RKAGIFQSVK_____ 0.379388566578902 0.00194036235975101 -0.309333333333333 -0.817 7.77712872057717 42.4775481605624 -0.309333333333333 -0.817 0.166834985502906 5.65256003922639e-05 -1.59647302081839 -11.3038767866241 P09669 COX6C P09669.S73.p_COX6C P09669_S73s _1_1_73_73 P09669 P09669 Cytochrome c oxidase subunit 6C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19201.19201.2 11.41 11.41 99 1 1 1 0 694.3918 1307.8087 S73s TMT10 68 (K) AGIFQsVK (-) AGIFQS(1.0)VK K:TMT10,s:Phosphorylated S COX6C 8781.3 2 1 6486.1 11.41 HUMAN 1 -7.7771 -42.4775 RKALDSNSLENDDLS-p Q32MZ4-2;S744-p RKALDSNSLENDDLS 0.196612231479941 0.669999472492289 0.302333333333333 0.041 13.7646209282335 2.37643135597765 0.302333333333333 0.041 0.0420279209937038 0.578571270307337 2.64980331582005 0.590567387425558 Q32MZ4 LRRFIP1 Q32MZ4.2.S744.p_LRRFIP1 Q32MZ4-2_S744s _1_1_744_744 Q32MZ4-2 Q32MZ4|Q32MZ4-2|Q32MZ4-3 Isoform 2 of Leucine-rich repeat flightless-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14696.14696.4 16.52 9.4 2.323 4 1 1 0 809.1218 3153.5035 S744s TMT10 739 (K) ALDSNsLENDDLSAPGREPGHFNPESR (E) ALDS(0.0)NS(0.99)LENDDLS(0.0)APGREPGHFNPES(0.0)R s:Phosphorylated S LRRFIP1 87029.9 4 17 235.1 419.93 HUMAN 1 13.7646 2.3764 RKAPAPVTPPAPVQN-p Q03468;T303-p RKAPAPVTPPAPVQN 0.772184255224755 0.0302131588935149 0.045 -0.288666666666667 2.14654593313945 20.563047652058 0.045 -0.288666666666667 0.610021872007617 0.00878405881082897 0.54101654539851 -3.99696673079183 Q03468 ERCC6 Q03468.T303.p_ERCC6 Q03468_T303t _1_1_303_303 Q03468 Q03468|P0DP91 DNA excision repair protein ERCC-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13798.14011.3 20.63 18.01 99 1 1 1 0 761.447 2202.3577 T303t TMT10 297 (R) KAPAPVtPPAPVQNK (N) KAPAPVT(1.0)PPAPVQNK K:TMT10,t:Phosphorylated T ERCC6 169554.2 6 4 403.1 327.23 HUMAN 1 2.1465 -20.563 RKAQRPKSLQLMDNR-p Q9H7D0;S1766-p RKAQRPKSLQLMDNR 0.696479931450379 0.0840158625645521 0.0606666666666667 0.205666666666667 2.95240510437685 14.241298692664 0.0606666666666667 0.205666666666667 0.506710016705993 0.0376591168190611 0.710728549351655 2.73565443888294 Q9H7D0 DOCK5 Q9H7D0.S1766.p_DOCK5 Q9H7D0_S1766s _1_1_1766_1766 Q9H7D0 Q9H7D0 Dedicator of cytokinesis protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15186.15186.2 13.02 5.18 99 1 1 1 0 643.3135 1205.651 S1766s TMT10 1766 (K) sLQLMDNR (L) S(1.0)LQLMDNR s:Phosphorylated S DOCK5 216331.8 3 9 828.1 217.17 HUMAN 1 2.9524 14.2413 RKAQSNPYYNGPHLN-p Q8WWI1;Y185-p RKAQSNPYYNGPHLN 0.159845829771225 0.120448210272887 -0.399 0.185333333333333 15.940032385593 12.1194109106907 -0.399 0.185333333333333 0.0254681126079403 0.0613845263224341 -3.05668432315089 2.35234531076735 Q8WWI1 LMO7 Q8WWI1.Y185.p_LMO7 Q8WWI1_Y185y _1_1_185_185 Q8WWI1 Q8WWI1|Q8WWI1-2 LIM domain only protein 7 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.18139.18190.3 26.07 21.14 2.283 3 1 1 0 752.053 2174.1759 Y185y TMT10 180 (K) AQSNPyYNGPHLNLK (A) AQS(0.0)NPY(0.99)Y(0.0)NGPHLNLK K:TMT10,y:Phosphorylated Y LMO7 194118.5 2 1 114.1 26.07 HUMAN 1 -15.94 12.1194 RKASAQASLASKDKT-p E7ETA6;S1287-p RKASAQASLASKDKT 0.783485670526388 0.00767067660835817 -0.0423333333333333 -0.625666666666667 2.03793021531188 30.1994043471545 -0.0423333333333334 -0.625666666666667 0.625470712049298 0.000955123576187426 -0.51718566842423 -6.48265748891535 E7ETA6 PCM1 E7ETA6.S1287.p_PCM1 E7ETA6_S1287s _1_1_1287_1287 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8919.8919.2 15.53 15.53 3.35 3 1 1 0 736.3989 1391.8259 S1287s TMT10 1282 (K) ASAQAsLASK (D) AS(0.0)AQAS(0.99)LAS(0.0)K K:TMT10,s:Phosphorylated S PCM1 229381.8 2 38 13.1 1159.95 HUMAN 1 -2.0379 -30.1994 RKASISLTDDEVDDE-p Q96L91;T945-p RKASISLTDDEVDDE 0.0202025974976289 0.00156981917847586 1.21666666666667 1.038 39.4504893548324 45.100249261239 1.21666666666667 1.038 0.000113488293199896 3.09011807157636e-05 9.90941136753704 12.6817175500787 Q96L91 EP400 Q96L91.T945.p_EP400 Q96L91_T945t _1_1_945_945 Q96L91 Q96L91|Q96L91-2|Q96L91-5|Q96L91-3|Q96L91-4|A0A0A0MR80 E1A-binding protein p400 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26932.26932.4 20.87 20.87 1.421 6 1 1 0 1186.0538 4661.2001 T945t TMT10 940 (K) ASISLtDDEVDDEEETIEEEEANEGVVDHQTELSNLAK (E) AS(0.0)IS(0.0)LT(0.99)DDEVDDEEET(0.0)IEEEEANEGVVDHQT(0.0)ELS(0.0)NLAK K:TMT10,t:Phosphorylated T EP400 344909.2 1 19 91.1 620.97 HUMAN 1 39.4505 45.1002 RKCEDPDSPVTKKMR-p Q9BUB4;S191-p RKCEDPDSPVTKKMR 0.257542694496263 0.00362547325782365 -0.214333333333333 -0.951333333333333 11.1941697133141 36.2824639302431 -0.214333333333333 -0.951333333333333 0.0759596628907088 0.000235371354704935 -2.19016172313485 -8.57853510782986 Q9BUB4 ADAT1 Q9BUB4.S191.p_ADAT1 Q9BUB4_S191s _1_1_191_191 Q9BUB4 Q9BUB4|Q9BUB4-2 tRNA-specific adenosine deaminase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7724.7724.3 17.59 13.78 5.257 2 1 1 0 800.7716 2320.3352 S191s TMT10 185 (R) KCEDPDsPVTKK (M) KCEDPDS(0.99)PVT(0.0)KK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ADAT1 56190.2 9 1 2969.1 64.46 HUMAN 1 -11.1942 -36.2825 RKDIEVLSEDTDYEE-p Q4LE39;S790-p RKDIEVLSEDTDYEE 0.608670397110072 0.0257079144253812 -0.116 0.367333333333333 3.99187054022253 21.6276625132784 -0.116 0.367333333333333 0.398853076229098 0.00687438337790767 -0.915575342200637 4.2329217981149 Q4LE39 ARID4B Q4LE39.S790.p_ARID4B Q4LE39_S790s _1_1_790_790 Q4LE39 Q4LE39|Q4LE39-2|Q4LE39-3|Q4LE39-4 AT-rich interactive domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22852.22852.2 20.37 20.37 2.3 4 1 1 0 1334.117 2587.2551 S790s TMT10 785 (K) DIEVLsEDTDYEEDEVTK (K) DIEVLS(0.99)EDT(0.0)DY(0.0)EEDEVT(0.0)K K:TMT10,s:Phosphorylated S ARID4B 148890.9 3 8 191.1 463.89 HUMAN 1 -3.9919 21.6277 RKDSVWGSGGGQQSV-p Q53EL6;S317-p RKDSVWGSGGGQQSV 0.301887758255495 0.0692736098608303 -0.169666666666667 0.258 9.75038262060749 15.4160341976115 -0.169666666666667 0.258 0.105916040728637 0.0287340326057221 -1.93837418718384 2.95485491831764 Q53EL6 PDCD4 Q53EL6.S317.p_PDCD4 Q53EL6_S317s _1_1_317_317 Q53EL6 Q53EL6|Q53EL6-2 Programmed cell death protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17582.17582.3 18.14 14.97 1.109 3 1 1 0 798.4059 2313.2352 S317s TMT10 312 (K) DSVWGsGGGQQSVNHLVK (E) DS(0.0)VWGS(0.99)GGGQQS(0.0)VNHLVK K:TMT10,s:Phosphorylated S PDCD4 52133.7 2 10 476.1 301.17 HUMAN 1 -9.7504 15.416 RKDVLGDSEEEDMGL-p Q9HCE6;S281-p RKDVLGDSEEEDMGL 0.874281580876972 0.563951511645017 -0.027 -0.058 1.14197984420672 3.35248216177686 -0.027 -0.058 0.768779892106032 0.462116828178051 -0.309122955316452 -0.791020841532825 Q9HCE6 ARHGEF10L Q9HCE6.S281.p_ARHGEF10L Q9HCE6_S281s _1_1_281_281 Q9HCE6 Q9HCE6|Q9HCE6-2|Q9HCE6-3|Q9HCE6-5 Rho guanine nucleotide exchange factor 10-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36293.36293.4 33.54 33.54 9.138 4 1 1 0 1250.13 4917.5154 S281s TMT10 276 (K) DVLGDsEEEDMGLLEVSVSDIKPPAPELGPMPEGLSPQQVVR (R) DVLGDS(0.99)EEEDMGLLEVS(0.0)VS(0.0)DIKPPAPELGPMPEGLS(0.0)PQQVVR K:TMT10,s:Phosphorylated S ARHGEF10L 142004.4 10 2 2776.1 71.1 HUMAN 1 -1.142 -3.3525 RKEDLRPSAPQQEGE-p O76070;S103-p RKEDLRPSAPQQEGE 0.872093972512128 0.0572605133020844 -0.0246666666666667 0.459333333333333 1.16318175746456 16.5500501500598 -0.0246666666666667 0.459333333333333 0.7650359157858 0.0221306915409071 -0.314324427786523 3.17219356814929 O76070 SNCG O76070.S103.p_SNCG O76070_S103s _1_1_103_103 O76070 O76070 Gamma-synuclein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8414.8414.4 13.45 13.45 9.555 2 1 1 0 660.1016 2557.4189 S103s TMT10 97 (R) KEDLRPsAPQQEGEASK (E) KEDLRPS(0.99)APQQEGEAS(0.0)K K:TMT10,s:Phosphorylated S SNCG 13330.6 1 6 1321.1 154.3 HUMAN 1 -1.1632 16.5501 RKEDQDRSPRRHGHE-p O60318;S300-p RKEDQDRSPRRHGHE 0.0635370415880919 0.102189462836418 0.477 0.234666666666667 25.9399069094105 13.0863480780422 0.477 0.234666666666667 0.00254688484422285 0.0491320847371567 5.28583326986384 2.52524156859888 O60318 MCM3AP O60318.S300.p_MCM3AP O60318_S300s _1_1_300_300 O60318 O60318 Germinal-center associated nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.2829.2829.4 8.18 5.31 99 1 1 1 0 456.9923 1744.9819 S300s TMT10 293 (K) RKEDQDRsPR (R) RKEDQDRS(1.0)PR K:TMT10,s:Phosphorylated S MCM3AP 220797 3 2 653.1 254.06 HUMAN 1 25.9399 13.0863 RKEEAKESPSAAGPE-p Q3KQU3;S517-p RKEEAKESPSAAGPE 0.123443650291058 0.00507942483656417 -0.375666666666667 -0.794 18.8953154113698 33.427608169798 -0.375666666666667 -0.794 0.0128963989291487 0.000454191688974791 -3.64578127809409 -7.53290548843281 Q3KQU3 MAP7D1 Q3KQU3.S517.p_MAP7D1 Q3KQU3_S517s _1_1_517_517 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2|Q3KQU3-3 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5548.5548.4 13.22 8.38 1.157 2 1 1 0 707.136 2745.5553 S517s TMT10 510 (R) RKEEAKEsPSAAGPEDK (S) RKEEAKES(0.99)PS(0.0)AAGPEDK K:TMT10,s:Phosphorylated S MAP7D1 93160.6 2 18 160.1 495.56 HUMAN 1 -18.8953 -33.4276 RKEENFSSPKNAKRP-p Q96SB8-2;S11-p RKEENFSSPKNAKRP 0.167516061063847 0.001207413039409 -0.226666666666667 -1.13833333333333 15.5011122282306 48.0195018765375 -0.226666666666667 -1.13833333333333 0.0281766123577228 1.5777922276184e-05 -2.97297423662034 -14.4012546778335 Q96SB8 SMC6 Q96SB8.2.S11.p_SMC6 Q96SB8-2_S11s _1_1_11_11 Q96SB8-2 Q96SB8-2 Isoform 2 of Structural maintenance of chromosomes protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6436.6436.4 11.51 9.67 1.483 2 1 1 0 498.0244 1909.111 S11s TMT10 4 (K) RKEENFSsPK (N) RKEENFS(0.0)S(0.99)PK K:TMT10,s:Phosphorylated S SMC6 130178.6 4 1 3775.1 43.35 HUMAN 1 -15.5011 -48.0195 RKEEPRYSGKEHPVS-p Q7Z2K8;S262-p RKEEPRYSGKEHPVS 0.0394708703166875 0.00934563065091057 -0.998333333333333 -0.737 31.5984120310683 28.6481996769418 -0.998333333333334 -0.737 0.000692083980571845 0.00136514892774132 -6.93357535955559 -6.02216475107794 Q7Z2K8 GPRIN1 Q7Z2K8.S262.p_GPRIN1 Q7Z2K8_S262s _1_1_262_262 Q7Z2K8 Q7Z2K8|Q7Z2K8-2 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6114.6114.3 8.29 4.39 4.934 2 1 1 0 621.0102 1781.0524 S262s TMT10 256 (R) KEEPRYsGK (E) KEEPRY(0.0)S(0.99)GK K:TMT10,s:Phosphorylated S GPRIN1 103196.3 1 8 292.1 381.4 HUMAN 1 -31.5984 -28.6482 RKEGQGNSDSDQPGP-p Q9H0M4;S536-p RKEGQGNSDSDQPGP 0.24047106331053 0.0155764211987011 -0.262666666666667 0.349666666666667 11.8295890804727 24.988703522587 -0.262666666666667 0.349666666666667 0.0656207352207709 0.00317051379927784 -2.3021444463795 5.03463613583969 Q9H0M4 ZCWPW1 Q9H0M4.S536.p_ZCWPW1 Q9H0M4_S536s _1_1_536_536 Q9H0M4 Q9H0M4 Zinc finger CW-type PWWP domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6053.6053.3 10.66 10.66 2.382 2 1 1 0 771.0551 2231.1871 S536s TMT10 531 (K) EGQGNsDSDQPGPKK (K) EGQGNS(0.99)DS(0.0)DQPGPKK K:TMT10,s:Phosphorylated S ZCWPW1 72804.5 1 3 4226.1 35.11 HUMAN 1 -11.8296 24.9887 RKEKGGRSPDEVTLT-p Q9UKS6;S319-p RKEKGGRSPDEVTLT 0.498541224247654 0.338643066759598 0.100333333333333 -0.132 5.56925563549518 6.23029717483999 0.100333333333333 -0.132 0.277379548208684 0.23821564598766 1.20743024112709 -1.3251605763222 Q9UKS6 PACSIN3 Q9UKS6.S319.p_PACSIN3 Q9UKS6_S319s _1_1_319_319 Q9UKS6 Q9UKS6 Protein kinase C and casein kinase substrate in neurons protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16872.16872.5 18.35 18.35 5.787 5 1 1 0 516.8816 2500.4135 S319s TMT10 314 (K) EKGGRsPDEVTLTSIVPTR (D) EKGGRS(0.99)PDEVT(0.0)LT(0.0)S(0.0)IVPT(0.0)R K:TMT10,s:Phosphorylated S PACSIN3 48828.3 9 5 547.1 275.62 HUMAN 1 5.5693 -6.2303 RKERPARTPPRRRTL-p E7ERS3;T701-p RKERPARTPPRRRTL 0.101218422745456 0.130080583050137 1.60733333333333 -0.552333333333333 21.0438920792287 11.6736072962817 1.60733333333333 -0.552333333333333 0.00786340767528871 0.0680204139175568 4.10664909652633 -2.27347357309354 E7ERS3 ZC3H18 E7ERS3.T701.p_ZC3H18 E7ERS3_T701t _1_1_701_701 E7ERS3 E7ERS3|Q86VM9|Q86VM9-2 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.2906.2906.5 7.16 1.62 99 1 1 1 0 381.2244 1822.1288 T701t TMT10 694 (R) RKERPARtPPR (R) RKERPART(1.0)PPR K:TMT10,t:Phosphorylated T ZC3H18 109165.8 1 13 157.1 499.97 HUMAN 1 21.0439 -11.6736 RKESYSIYVYKVLKR-p Q6DN03;Y41-p RKESYSIYVYKVLKR 0.657305140848715 0.00647611080454284 -0.0806666666666667 -0.520333333333333 3.41895664627759 31.4732426347537 -0.0806666666666667 -0.520333333333333 0.455097380100773 0.000712320981164706 -0.804294969351735 -6.88157004267579 Q6DN03 NotFound Q6DN03.Y41.p_NotFound Q6DN03_Y41y _1_1_41_41 Q6DN03 Q6DN03|Q6DRA6|P33778|P06899|P23527 Putative histone H2B type 2-C GG20160819_MSz_CCLE_T4D7_pY_Injection_02.19466.19466.3 8.99 8.99 8.988 5 1 1 0 683.0417 1967.1457 Y41y TMT10 35 (R) KESYSIyVYK (V) KES(0.0)Y(0.0)S(0.0)IY(0.99)VY(0.0)K K:TMT10,y:Phosphorylated Y HIST2H2BC 21985.2 3 1 50.2 44.01 HUMAN 1 -3.419 -31.4732 RKESYSVYVYKVLKQ-p U3KQK0;Y41-p RKESYSVYVYKVLKQ 0.98609608686731 0.00303364984304312 -0.00466666666666667 -0.636 0.123056192107376 37.8382583050295 -0.00466666666666667 -0.636 0.972062928507264 0.00016450313144472 -0.0366699862114221 -9.20028752576172 U3KQK0 NotFound U3KQK0.Y41.p_NotFound U3KQK0_Y41y _1_1_41_41 U3KQK0 U3KQK0|Q5QNW6-2|P57053|P62807|P58876|Q93079|O60814|Q99880 Histone H2B GG20160819_MSz_CCLE_T4D7_pY_Injection_01.19901.20098.2 19.78 19.78 2.956 5 1 1 0 838.423 1595.8721 Y41y TMT10 36 (K) ESYSVyVYK (V) ES(0.0)Y(0.0)S(0.0)VY(0.99)VY(0.0)K K:TMT10,y:Phosphorylated Y HIST1H2BN 18803.6 6 2 50.1 44.01 HUMAN 1 -0.1231 -37.8383 RKFLEHLSGAGKAIG-p Q01813;S21-p RKFLEHLSGAGKAIG 0.157589549248673 0.00212228854410704 -0.436333333333333 -0.845 16.1015871884236 41.5523153063889 -0.436333333333333 -0.845 0.0245381197273858 6.99468996374263e-05 -3.08772045551394 -10.8520931432046 Q01813 PFKP Q01813.S21.p_PFKP Q01813_S21s _1_1_21_21 Q01813 Q01813 ATP-dependent 6-phosphofructokinase, platelet type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17656.17656.3 14.84 10.85 99 1 1 1 0 532.958 1516.8888 S21s TMT10 16 (K) FLEHLsGAGK (A) FLEHLS(1.0)GAGK K:TMT10,s:Phosphorylated S PFKP 86507.4 1 1 1494.1 136.65 HUMAN 1 -16.1016 -41.5523 RKFPFYKSKENMAQE-p Q92796-2;S275-p RKFPFYKSKENMAQE 0.0807694920786818 0.0068028918723379 0.846666666666667 -2.20733333333333 23.3303452046956 31.1060868543831 0.846666666666667 -2.20733333333333 0.00464478354080968 0.000775159929521045 4.63295791258495 -6.76459442230031 Q92796 DLG3 Q92796.2.S275.p_DLG3 Q92796-2_S275s _1_1_275_275 Q92796-2 Q92796-2 Isoform 2 of Disks large homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17531.17531.4 7.7 7.7 7.697 2 1 1 0 511.0572 1961.2394 S275s TMT10 269 (R) KFPFYKsK (E) KFPFY(0.0)KS(0.99)K K:TMT10,s:Phosphorylated S DLG3 58107.5 1 2 1430.1 143.07 HUMAN 1 23.3303 -31.1061 RKFTYLGSQDRARPP-p C9J6P4;S302-p RKFTYLGSQDRARPP 0.251097989416281 0.00497230711762437 -0.235 -0.656333333333333 11.4519271254661 33.5948383828859 -0.235 -0.656333333333334 0.0715825701352754 0.000437034942462136 -2.2354814675285 -7.59097087093911 C9J6P4 ZC3HAV1 C9J6P4.S302.p_ZC3HAV1 C9J6P4_S302s _1_1_302_302 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2|Q7Z2W4-3 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13612.13612.3 9.2 9.2 9.195 3 1 1 0 584.976 1672.9423 S302s TMT10 296 (R) KFTYLGsQDR (A) KFT(0.0)Y(0.0)LGS(0.99)QDR K:TMT10,s:Phosphorylated S ZC3HAV1 115909.2 1 6 361.1 343.37 HUMAN 1 -11.4519 -33.5948 RKGAGDGSDEEVDGK-p P35579;S1943-p RKGAGDGSDEEVDGK 0.218892489028321 0.320661489051755 -0.237333333333333 0.114 12.7118172959649 6.53092106709895 -0.237333333333333 0.114 0.0535572501450785 0.222283841322364 -2.4592652991091 1.37827126805241 P35579 MYH9 P35579.S1943.p_MYH9 P35579_S1943s _1_1_1943_1943 P35579 P35579|P35579-2 Myosin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8942.8942.3 20.72 20.72 99 1 1 1 0 905.076 2633.2579 S1943s Hydrogen 1938 (K) GAGDGsDEEVDGKADGAEAKPAE (-) GAGDGS(1.0)DEEVDGKADGAEAKPAE K:TMT10-Lys-Only,s:Phosphorylated S MYH9 227783.5 45 36 296.1 379.15 HUMAN 1 -12.7118 6.5309 RKGESGQSWPRLTKE-p A0A087WYT3;S89-p RKGESGQSWPRLTKE 0.862800750352503 0.24660626512283 0.026 0.113666666666667 1.24982542385343 8.01138886796259 0.026 0.113666666666667 0.749924353918238 0.158074243910517 0.335421585414326 1.63661670383349 A0A087WYT3 PTGES3 A0A087WYT3.S89.p_PTGES3 A0A087WYT3_S89s _1_1_89_89 A0A087WYT3 A0A087WYT3|Q15185|Q15185-4|Q15185-3|B4DDC6 Prostaglandin E synthase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8464.8670.3 8.37 8.37 8.373 2 1 1 0 557.2875 1589.88 S89s TMT10 83 (R) KGESGQsWPR (L) KGES(0.0)GQS(0.99)WPR K:TMT10,s:Phosphorylated S PTGES3 19439.9 4 3 1781.1 115.3 HUMAN 1 1.2498 8.0114 RKGGFFSSFMKKRNA-p P42684-6;S634-p RKGGFFSSFMKKRNA 0.856296769318185 0.153490733848371 0.0656666666666667 0.199666666666667 1.31105651088425 10.7018819866152 0.0656666666666667 0.199666666666667 0.739425372706848 0.0850769283027928 0.350181204328193 2.10304118635095 P42684 ABL2 P42684.6.S634.p_ABL2 P42684-6_S634s _1_1_634_634 P42684-6 P42684-3|P42684-6|P42684-2|P42684-5|P42684-10|P42684-7 Isoform 6 of Abelson tyrosine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24542.24542.3 10.73 10.73 1.399 2 1 1 0 635.0106 1823.0493 S634s TMT10 628 (R) KGGFFSsFMK (K) KGGFFS(0.0)S(0.99)FMK K:TMT10,s:Phosphorylated S ABL2 127186.4 4 6 615.1 261.3 HUMAN 1 1.3111 10.7019 RKGGPEFSV______-p Q9NXF8-2;S344-p RKGGPEFSV______ 0.567656016658623 0.0394532304370001 -0.0806666666666667 -0.412 4.52755273364619 18.8337275366965 -0.0806666666666667 -0.412 0.352569489359285 0.0130805873810813 -1.01672109711452 -3.62985869665987 Q9NXF8 ZDHHC7 Q9NXF8.2.S344.p_ZDHHC7 Q9NXF8-2_S344s _1_1_344_344 Q9NXF8-2 Q9NXF8-2 Isoform 2 of Palmitoyltransferase ZDHHC7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15967.15967.2 10.19 10.19 99 1 1 1 0 679.8594 1278.7458 S344s TMT10 338 (R) KGGPEFsV (-) KGGPEFS(1.0)V K:TMT10,s:Phosphorylated S ZDHHC7 40057.8 1 1 6681.1 10.19 HUMAN 1 -4.5276 -18.8337 RKGLPLGSAVSSPVL-p Q8WUM0;S41-p RKGLPLGSAVSSPVL 0.911753399332893 0.345294206674116 -0.0213333333333333 -0.104 0.780959234539283 6.12022673968445 -0.0213333333333333 -0.104 0.835418477373058 0.244330298758932 -0.21799432392011 -1.30563634546753 Q8WUM0 NUP133 Q8WUM0.S41.p_NUP133 Q8WUM0_S41s _1_1_41_41 Q8WUM0 Q8WUM0 Nuclear pore complex protein Nup133 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.32714.32714.3 11.99 11.99 2.612 4 1 1 0 717.059 2069.1956 S41s TMT10 36 (K) GLPLGsAVSSPVLFSPVGR (R) GLPLGS(0.99)AVS(0.0)S(0.0)PVLFS(0.0)PVGR s:Phosphorylated S NUP133 130003.6 1 3 652.1 254.15 HUMAN 1 -0.781 -6.1202 RKGQRSLTPPPSSTE-p Q9UGU0;T1671-p RKGQRSLTPPPSSTE 0.764821841803188 0.0538191978752484 0.044 0.252333333333333 2.23510920598979 16.918082982855 0.044 0.252333333333333 0.597708014768046 0.0203325431067254 0.560261317375187 3.24406084130622 Q9UGU0 TCF20 Q9UGU0.T1671.p_TCF20 Q9UGU0_T1671t _1_1_1671_1671 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11056.11264.2 16.54 11.2 2.716 6 1 1 0 884.9615 1688.9471 T1671t TMT10 1669 (R) SLtPPPSSTESK (A) S(0.0)LT(0.99)PPPS(0.0)S(0.0)T(0.0)ES(0.0)K K:TMT10,t:Phosphorylated T TCF20 213250.7 4 24 197.1 457.96 HUMAN 1 2.2351 16.9181 RKGRGFGSEGSRARM-p Q9Y5S9-2;S42-p RKGRGFGSEGSRARM 0.249013894617825 0.13831596200526 -0.179666666666667 -0.250333333333333 11.5218517429659 11.3180602196944 -0.179666666666667 -0.250333333333333 0.070439266628328 0.073823388934931 -2.24779998655836 -2.21089726371614 Q9Y5S9 RBM8A Q9Y5S9.2.S42.p_RBM8A Q9Y5S9-2_S42s _1_1_42_42 Q9Y5S9-2 Q9Y5S9-2 Isoform 2 of RNA-binding protein 8A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6361.6361.2 9.11 5.07 3.039 2 1 1 0 553.2475 1025.5213 S42s TMT10 39 (R) GFGsEGSR (A) GFGS(0.99)EGS(0.0)R s:Phosphorylated S RBM8A 19816.6 1 3 2408.1 84.82 HUMAN 1 -11.5219 -11.3181 RKGRHRGSEEDPLLS-p Q13017;S1195-p RKGRHRGSEEDPLLS 0.0387298944141393 0.0378256948773241 -0.553666666666667 -0.588333333333333 32.084123779472 19.1002802327163 -0.553666666666667 -0.588333333333334 0.000618853173062146 0.0123018938909076 -7.09215266484997 -3.6852137669852 Q13017 ARHGAP5 Q13017.S1195.p_ARHGAP5 Q13017_S1195s _1_1_1195_1195 Q13017 Q13017|Q13017-2|A0A0A0MSK6 Rho GTPase-activating protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23164.23164.5 16.73 16.73 16.733 5 1 1 0 975.5128 4793.5404 S1195s TMT10 1192 (R) HRGsEEDPLLSPVETWKGGIDNPAITSDQELDDKK (M) HRGS(0.99)EEDPLLS(0.0)PVET(0.0)WKGGIDNPAIT(0.0)S(0.0)DQELDDKK K:TMT10,s:Phosphorylated S ARHGAP5 173940.2 1 10 639.1 255.25 HUMAN 1 -32.0841 -19.1003 RKGRKRKSVTWPEEG-p Q96QC0;S398-p RKGRKRKSVTWPEEG 0.450118444429121 0.040571581138409 -0.153666666666667 -0.265333333333333 6.40401768788086 18.6601710444232 -0.153666666666667 -0.265333333333333 0.228874933545923 0.0136139106379371 -1.35623093884736 -3.59404608148252 Q96QC0 PPP1R10 Q96QC0.S398.p_PPP1R10 Q96QC0_S398s _1_1_398_398 Q96QC0 Q96QC0 Serine/threonine-protein phosphatase 1 regulatory subunit 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16893.16893.3 12.17 12.17 1.463 2 1 1 0 524.2696 1490.8255 S398s TMT10 398 (K) sVTWPEEGK (L) S(0.99)VT(0.0)WPEEGK K:TMT10,s:Phosphorylated S PPP1R10 99398.3 2 4 592.1 264.27 HUMAN 1 -6.404 -18.6602 RKGSDGASPPASPSI-p Q02779;S502-p RKGSDGASPPASPSI 0.657493781284077 0.34914169115162 0.083 -0.109666666666667 3.41548054471428 6.05907727576651 0.083 -0.109666666666667 0.455461786754127 0.247794847929574 0.803608401415662 -1.29477002607263 Q02779 MAP3K10 Q02779.S502.p_MAP3K10 Q02779_S502sS506s_2_2_502_506 Q02779 Q02779 Mitogen-activated protein kinase kinase kinase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12788.12788.3 7.75 7.75 1.357 4 2 2 0 804.4138 2251.2923 S502s S506s TMT10 495 (K) RKGSDGAsPPAsPSIIPR (L) RKGS(0.0)DGAS(0.99)PPAS(0.99)PS(0.0)IIPR K:TMT10,s:Phosphorylated S MAP3K10 104434.3 1 3 4708.1 27.66 HUMAN 1 3.4155 -6.0591 RKHEKLHTADRPFVC-p O43829;T300-p RKHEKLHTADRPFVC 0.511831594720313 0.00854535309038411 0.103333333333333 -0.595 5.37836610417151 29.3512249951235 0.103333333333333 -0.595 0.289843382679292 0.00116112105539573 1.17296590333886 -6.22754422133473 O43829 ZBTB14 O43829.T300.p_ZBTB14 O43829_T300t _1_1_300_300 O43829 O43829 Zinc finger and BTB domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14799.14799.4 10.97 10.97 10.968 2 1 1 0 601.5413 2323.1761 T300t TMT10 298 (K) LHtADRPFVCEMCTK (G) LHT(0.99)ADRPFVCEMCT(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ZBTB14 51925.3 1 6 1836.1 111.99 HUMAN 1 5.3784 -29.3512 RKHKKDISENKRAVR-p P11142;S254-p RKHKKDISENKRAVR 0.117612251860766 0.036021439241004 0.711 -0.624666666666667 19.3339559291364 19.4278997952588 0.711 -0.624666666666667 0.0116574727002474 0.011408013343212 3.73744566957381 -3.75384789873262 P11142 HSPA8 P11142.S254.p_HSPA8 P11142_S254s _1_1_254_254 P11142 P11142|E9PKE3|E9PNE6|P11142-2|A8K7Q2 Heat shock cognate 71 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5566.5566.2 7.76 1.66 99 1 1 1 0 700.3712 1319.7683 S254s TMT10 252 (K) DIsENKR (A) DIS(1.0)ENKR K:TMT10,s:Phosphorylated S HSPA8 71125 4 15 367.1 341.38 HUMAN 1 19.334 -19.4279 RKHKKGQSEEIQKKR-p P83731;S64-p RKHKKGQSEEIQKKR 0.331019235460815 0.0368476744802948 -0.134333333333333 -0.289 8.97243278812561 19.2822988098491 -0.134333333333333 -0.289 0.126694196395164 0.0117969603303054 -1.8035907228348 -3.72326323430915 P83731 RPL24 P83731.S64.p_RPL24 P83731_S64s _1_1_64_64 P83731 P83731|C9JNW5|C9JXB8 60S ribosomal protein L24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7786.7786.3 10.66 10.66 99 1 1 1 0 605.3392 1734.0365 S64s TMT10 61 (K) KGQsEEIQK (K) KGQS(1.0)EEIQK K:TMT10,s:Phosphorylated S RPL24 17892.7 1 2 2884.1 66.97 HUMAN 1 -8.9724 -19.2823 RKHKYRSSPCPNVKH-p Q9C0B0;S255-p RKHKYRSSPCPNVKH 0.633204865850603 0.326377938509364 0.0746666666666667 0.154 3.69569837222252 6.43726683345554 0.0746666666666666 0.154 0.427002249333175 0.227129380654775 0.858495992028782 1.36175725164085 Q9C0B0 UNK Q9C0B0.S255.p_UNK Q9C0B0_S255s _1_1_255_255 Q9C0B0 Q9C0B0 RING finger protein unkempt homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7493.7493.3 10.24 10.24 1.432 3 1 1 0 582.6323 1665.9147 S255s TMT10 252 (K) YRSsPCPNVK (H) Y(0.0)RS(0.0)S(0.99)PCPNVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UNK 89851.6 2 5 1185.1 168.8 HUMAN 1 3.6957 6.4373 RKHPDADSLYVEEVD-p Q12904-2;S197-p RKHPDADSLYVEEVD 0.458814176947663 0.876203962572503 0.113666666666667 -0.026 6.24189267289367 0.807865274054641 0.113666666666667 -0.026 0.23758046757058 0.830258771643153 1.32754256850261 -0.224942235370197 Q12904 AIMP1 Q12904.2.S197.p_AIMP1 Q12904-2_S197s _1_1_197_197 Q12904-2 Q12904-2 Isoform 2 of Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19706.19706.4 21.41 21.41 4.631 2 1 1 0 720.1152 2797.4772 S197s TMT10 191 (R) KHPDADsLYVEEVDVGEIAPR (T) KHPDADS(0.99)LY(0.0)VEEVDVGEIAPR K:TMT10,s:Phosphorylated S AIMP1 37380.8 1 4 2576.1 78.03 HUMAN 1 6.2419 -0.8079 RKHSKIHSIRSLASQ-p A0A1B0GV68;S370-p RKHSKIHSIRSLASQ 0.65332034533549 0.0724034151142646 0.0636666666666666 0.319 3.46682083583756 15.1515289296437 0.0636666666666667 0.319 0.450109227601519 0.0305384582039649 0.813733677438645 2.90499999009293 A0A1B0GV68 NotFound A0A1B0GV68.S370.p_NotFound A0A1B0GV68_S370sS373s_2_2_370_373 A0A1B0GV68 Q9Y4F1-2|C9JME2|A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27020.27024.4 12.12 12.12 1.13 12 2 2 0 1249.0792 4832.3595 S370s S373s N382n TMT10 368 (K) IHsIRsLASQPTELnSEVLEQSQQSTSLTFGEGAESPGGQSCR (R) IHS(0.99)IRS(0.99)LAS(0.0)QPT(0.0)ELN(1.0)S(0.0)EVLEQS(0.0)QQS(0.0)T(0.0)S(0.0)LT(0.0)FGEGAES(0.0)PGGQS(0.0)CR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated FARP1 88555.5 1 25 147.1 514.5 HUMAN 1 3.4668 15.1515 RKHVKQDSNVNEEWK-p Q99570;S853-p RKHVKQDSNVNEEWK 0.11918102835135 0.0327984188490608 -0.428666666666667 -0.388 19.2212770282169 20.0239362282493 -0.428666666666667 -0.388 0.0119638868553876 0.00994503640327341 -3.71378515142879 -3.88045257606356 Q99570 PIK3R4 Q99570.S853.p_PIK3R4 Q99570_S853s _1_1_853_853 Q99570 Q99570 Phosphoinositide 3-kinase regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9745.9745.4 15.21 15.21 99 1 1 1 0 595.813 2300.2602 S853s TMT10 848 (K) HVKQDsNVNEEWK (S) HVKQDS(1.0)NVNEEWK K:TMT10,s:Phosphorylated S PIK3R4 154412.9 2 2 2103.1 97.58 HUMAN 1 -19.2213 -20.0239 RKIDTHPSPSHSSTV-p Q8NI27;S1417-p RKIDTHPSPSHSSTV 0.192652167830757 0.744658741972167 0.310666666666667 0.0326666666666667 13.9583168539912 1.76733817784844 0.310666666666667 0.0326666666666667 0.0401946558548358 0.665681031891773 2.68526857572735 0.456587055626939 Q8NI27 THOC2 Q8NI27.S1417.p_THOC2 Q8NI27_S1417s _1_1_1417_1417 Q8NI27 Q8NI27|A0A0C4DG98|Q8NI27-2 THO complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6741.6741.3 14.7 14.7 3.435 6 1 1 0 677.6816 1951.0649 S1417s TMT10 1412 (K) IDTHPsPSHSSTVK (D) IDT(0.0)HPS(0.99)PS(0.0)HS(0.0)S(0.0)T(0.0)VK K:TMT10,s:Phosphorylated S THOC2 184654.1 6 11 512.1 287.1 HUMAN 1 13.9583 1.7673 RKIFKLGSEKKKKQY-p Q9H2G2;S14-p RKIFKLGSEKKKKQY 0.140132708968999 0.263746661523847 -0.311666666666667 -0.257 17.4626406656234 7.62571590951685 -0.311666666666667 -0.257 0.0179364269635753 0.172754118179027 -3.35431875186706 -1.56968337487237 Q9H2G2 SLK Q9H2G2.S14.p_SLK Q9H2G2_S14s _1_1_14_14 Q9H2G2 Q9H2G2|Q9H2G2-2 STE20-like serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19883.19883.3 12.41 12.41 99 1 1 1 0 563.6702 1609.0292 S14s TMT10 9 (K) IFKLGsEK (K) IFKLGS(1.0)EK K:TMT10,s:Phosphorylated S SLK 143320 2 1 329.1 359.67 HUMAN 1 -17.4626 -7.6257 RKIFPGLSPVRIMKK-p Q5VZK9;S122-p RKIFPGLSPVRIMKK 0.536352617148932 0.0285944835192666 -0.0833333333333333 0.296666666666667 5.00368279144713 20.9086014679956 -0.0833333333333333 0.296666666666667 0.315959720413508 0.00811222248744603 -1.10473295533087 4.07268261573102 Q5VZK9 LRRC16A Q5VZK9.S122.p_LRRC16A Q5VZK9_S122s _1_1_122_122 Q5VZK9 Q5VZK9|Q5VZK9-2|Q5VZK9-3|A0A0U1RR91 F-actin-uncapping protein LRRC16A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21141.21141.3 10.4 10.4 99 1 1 1 0 551.3283 1572.0038 S122s TMT10 116 (R) KIFPGLsPVR (I) KIFPGLS(1.0)PVR K:TMT10,s:Phosphorylated S CARMIL1 152809.3 3 1 280.1 388.82 HUMAN 1 -5.0037 20.9086 RKIGDFRSLEKISRE-p O95831;S292-p RKIGDFRSLEKISRE 0.886998410068536 0.0167192170849026 0.028 0.358333333333333 1.01593147386387 24.5280896932189 0.028 0.358333333333333 0.791419692895415 0.00352525900534814 0.277869909498371 4.91925147405713 O95831 AIFM1 O95831.S292.p_AIFM1 O95831_S292s _1_1_292_292 O95831 O95831|O95831-3|O95831-4|O95831-6 Apoptosis-inducing factor 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18182.18182.3 10.86 6.46 99 1 1 1 0 534.9611 1522.8993 S292s TMT10 287 (K) IGDFRsLEK (I) IGDFRS(1.0)LEK K:TMT10,s:Phosphorylated S AIFM1 67184.7 3 7 1056.1 182.66 HUMAN 1 1.0159 24.5281 RKILGQSSPEKKIRI-p P29374;S864-p RKILGQSSPEKKIRI 0.887815236374425 0.448798607940632 -0.022 -0.087 1.00635276924591 4.63771971643989 -0.022 -0.087 0.793167157330181 0.343738381977585 -0.275471194445604 -1.03703243906802 P29374 ARID4A P29374.S864.p_ARID4A P29374_S864s _1_1_864_864 P29374 P29374|P29374-2|P29374-3 AT-rich interactive domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12114.12114.3 10.26 10.26 1.425 2 1 1 0 618.6959 1774.1041 S864s TMT10 858 (R) KILGQSsPEK (K) KILGQS(0.0)S(0.99)PEK K:TMT10,s:Phosphorylated S ARID4A 143719.1 11 5 532.1 280.77 HUMAN 1 -1.0064 -4.6377 RKINSAPSSPIKTNK-p A0AVK6;S416-p RKINSAPSSPIKTNK 0.113798805771488 0.00404124447761282 0.405333333333333 -0.607666666666667 19.6805852912366 35.2721263960099 0.405333333333333 -0.607666666666667 0.0107632015003148 0.00029702113984497 3.81073338769955 -8.19493422449698 A0AVK6 E2F8 A0AVK6.S416.p_E2F8 A0AVK6_S416sS417s_2_2_416_417 A0AVK6 A0AVK6 Transcription factor E2F8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13272.13272.3 8.87 6.57 2.749 3 2 2 0 663.6979 1829.1463 S416s S417s TMT10 410 (R) KINSAPssPIK (T) KINS(0.0)APS(0.99)S(0.99)PIK K:TMT10,s:Phosphorylated S E2F8 94792 6 8 1788.1 114.89 HUMAN 1 19.6806 -35.2721 RKIQSSLSVNSDISK-p Q9P1T7-1;S249-p RKIQSSLSVNSDISK 0.390105099545893 0.500965989636653 -0.115666666666667 -0.0696666666666666 7.55903403885196 4.01831124863718 -0.115666666666667 -0.0696666666666666 0.175427064468679 0.396432156683214 -1.55855705739259 -0.92047177089815 Q9P1T7 MDFIC Q9P1T7.1.S249.p_MDFIC Q9P1T7-1_S249sS252s_2_2_249_252 Q9P1T7-1 Q9P1T7-1|J3KN13 Isoform 1 of MyoD family inhibitor domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19345.19345.4 11.31 11.31 1.583 5 2 2 0 589.0666 2193.3058 S249s S252s TMT10 244 (K) IQSSLsVNsDISKK (S) IQS(0.0)S(0.0)LS(0.99)VNS(0.99)DIS(0.0)KK K:TMT10,s:Phosphorylated S MDFIC 38638.9 9 3 2928.1 65.75 HUMAN 1 -7.559 -4.0183 RKKAGSFSRRLIKRF-p O14523;S683-p RKKAGSFSRRLIKRF 0.0295447532421185 0.00178284028886761 -1.22666666666667 -0.994666666666667 35.6986543338214 43.3453423368704 -1.22666666666667 -0.994666666666667 0.000269236890813247 4.62877175593704e-05 -8.37166006211361 -11.7434460723427 O14523 C2CD2L O14523.S683.p_C2CD2L O14523_S683s _1_1_683_683 O14523 O14523-2 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6121.6121.3 8.32 8.32 8.319 2 1 1 0 430.9041 1210.7308 S683s TMT10 678 (K) KAGSFsR (R) KAGS(0.0)FS(0.99)R K:TMT10,s:Phosphorylated S C2CD2L 76636.4 1 17 411.1 322.51 HUMAN 1 -35.6987 -43.3453 RKKEARYSDGSIALD-p Q12923-4;S345-p RKKEARYSDGSIALD 0.166624001871184 0.525279076708485 -0.305 -0.0656666666666667 15.5614800568458 3.75644216872001 -0.305 -0.0656666666666667 0.0277876611487964 0.421071437661111 -2.98443556832083 -0.870136377414653 Q12923 PTPN13 Q12923.4.S345.p_PTPN13 Q12923-4_S345s _1_1_345_345 Q12923-4 Q12923-4|Q12923-3|Q12923-2 Isoform 4 of Tyrosine-protein phosphatase non-receptor type 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29056.29056.3 13.8 11.8 1.195 3 1 1 0 640.6504 1839.969 S345s Hydrogen 344 (R) YsDGSIALDIFGPQK (M) Y(0.0)S(0.99)DGS(0.0)IALDIFGPQK K:TMT10-Lys-Only,s:Phosphorylated S PTPN13 279614.3 6 3 518.1 284.65 HUMAN 1 -15.5615 -3.7564 RKKEPPRSKSQSRSQ-p O75494;S235-p RKKEPPRSKSQSRSQ 0.775124418170112 0.00177043297676807 -0.100333333333333 1.226 2.11923466468157 43.4689762802131 -0.100333333333333 1.226 0.613870174886279 4.49885889583843e-05 -0.535048439100437 11.8073539602393 O75494 SRSF10 O75494.S235.p_SRSF10 O75494_S235s _1_1_235_235 O75494 O75494|O75494-2 Serine/arginine-rich splicing factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4841.4841.4 7.67 7.67 99 1 1 1 0 492.3057 1886.2357 S235s TMT10 229 (R) KKEPPRsK (S) KKEPPRS(1.0)K K:TMT10,s:Phosphorylated S SRSF10 31357 1 4 867.1 210.03 HUMAN 1 -2.1192 43.469 RKKGAKLTPEEEEIL-p P62241;T130-p RKKGAKLTPEEEEIL 0.757811548618003 0.0017724175152835 -0.0803333333333333 0.820666666666667 2.30668635698657 43.4193681060775 -0.0803333333333334 0.820666666666667 0.587937774725011 4.55054265252534e-05 -0.575697501769251 11.7816719260066 P62241 RPS8 P62241.T130.p_RPS8 P62241_T130t _1_1_130_130 P62241 P62241|Q5JR95 40S ribosomal protein S8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19277.19277.4 13.98 13.98 99 1 1 1 0 585.3287 2258.3211 T130t TMT10 126 (K) GAKLtPEEEEILNK (K) GAKLT(1.0)PEEEEILNK K:TMT10,t:Phosphorylated T RPS8 24490 3 1 4465.1 30.97 HUMAN 1 -2.3067 43.4194 RKKHLFSSTENLAAG-p Q6WKZ4;S357-p RKKHLFSSTENLAAG 0.857856311166697 0.492555298459146 -0.0263333333333333 -0.074 1.29758687774884 4.11153031012088 -0.0263333333333333 -0.074 0.741722258812337 0.388013618732913 -0.346944771838897 -0.938227386516699 Q6WKZ4 RAB11FIP1 Q6WKZ4.S357.p_RAB11FIP1 Q6WKZ4_S357s _1_1_357_357 Q6WKZ4 Q6WKZ4|Q6WKZ4-3|E7EX40|Q6WKZ4-2 Rab11 family-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18932.18932.4 15.3 15.3 1.166 6 1 1 0 925.4767 3618.9119 S357s TMT10 352 (K) KHLFSsTENLAAGSWKEPAEGGGLSSDR (Q) KHLFS(0.0)S(0.99)T(0.0)ENLAAGS(0.0)WKEPAEGGGLS(0.0)S(0.0)DR K:TMT10,s:Phosphorylated S RAB11FIP1 137564.1 16 8 56.1 721.17 HUMAN 1 -1.2976 -4.1115 RKKKPPVSPPLLLVQ-p Q8IY92;S467-p RKKKPPVSPPLLLVQ 0.577239623752612 0.910780755138753 -0.16 0.0126666666666667 4.39040780343946 0.568459032614892 -0.16 0.0126666666666667 0.363880866032459 0.877312054535835 -0.991058737266934 0.161813130507181 Q8IY92 SLX4 Q8IY92.S467.p_SLX4 Q8IY92_S467s _1_1_467_467 Q8IY92 Q8IY92|Q8IY92-2 Structure-specific endonuclease subunit SLX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20839.20839.4 10.86 10.86 10.468 4 1 1 0 733.1742 2849.7067 S467s TMT10 462 (K) KKPPVsPPLLLVQDSETTGR (Q) KKPPVS(0.99)PPLLLVQDS(0.0)ET(0.0)T(0.0)GR K:TMT10,s:Phosphorylated S SLX4 201834.1 1 2 218.1 430.83 HUMAN 1 -4.3904 0.5685 RKKKSYTTPKKNKHK-p P62979;T87-p RKKKSYTTPKKNKHK 0.0560512733223567 0.000952253650599092 -0.875666666666667 -2.00266666666667 27.2748888709135 58.8776708063409 -0.875666666666667 -2.00266666666667 0.00187288500656843 1.29489012640248e-06 -5.64398395288777 -22.9927938289679 P62979 RPS27A P62979.T87.p_RPS27A P62979_T87t _1_1_87_87 P62979 P62979 Ubiquitin-40S ribosomal protein S27a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7349.7349.3 8.23 8.23 1.356 4 1 1 0 531.3083 1511.94 T87t TMT10 83 (K) KSYTtPK (K) KS(0.0)Y(0.0)T(0.0)T(0.99)PK K:TMT10,t:Phosphorylated T RPS27A 18306.9 7 3 2864.1 67.87 HUMAN 1 -27.2749 -58.8777 RKKKVRASPAGQLPS-p Q12796;S105-p RKKKVRASPAGQLPS 0.0391574900042898 0.162135055402848 0.652 0.159 31.9043562548478 10.3885538012922 0.652 0.159 0.00064500692073885 0.0914417691464227 7.03311413959987 2.04843894205936 Q12796 PNRC1 Q12796.S105.p_PNRC1 Q12796_S105s _1_1_105_105 Q12796 Q12796 Proline-rich nuclear receptor coactivator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7426.7426.3 11.87 9.33 6.206 2 1 1 0 516.614 1467.8593 S105s TMT10 102 (K) VRAsPAGQLPSR (F) VRAS(0.99)PAGQLPS(0.0)R s:Phosphorylated S PNRC1 35281 1 1 6401.1 11.87 HUMAN 1 31.9044 10.3886 RKKLLHNSEDEQSLK-p Q9NSI6-2;S1678-p RKKLLHNSEDEQSLK 0.0830934452836521 0.329747487375062 -0.418333333333333 0.0973333333333334 23.1046670907334 6.38046915573274 -0.418333333333333 0.0973333333333334 0.00489252767461584 0.230119321275222 -4.57921430478038 1.35172853826613 Q9NSI6 BRWD1 Q9NSI6.2.S1678.p_BRWD1 Q9NSI6-2_S1678s _1_1_1678_1678 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13618.13618.3 15.06 15.06 7.045 2 1 1 0 651.0031 1871.0275 S1678s TMT10 1674 (K) LLHNsEDEQSLK (S) LLHNS(0.99)EDEQS(0.0)LK K:TMT10,s:Phosphorylated S BRWD1 259915.1 1 13 208.1 444.81 HUMAN 1 -23.1047 6.3805 RKKLNHPSLTESKES-p Q13352-5;S110-p RKKLNHPSLTESKES 0.297330507583042 0.0363048709168136 -0.228 -0.363666666666667 9.91062052268458 19.3824626251345 -0.228 -0.363666666666667 0.102079362165343 0.0115279938863576 -1.96618628635683 -3.74428923649717 Q13352 ITGB3BP Q13352.5.S110.p_ITGB3BP Q13352-5_S110s _1_1_110_110 Q13352-5 Q13352-5|Q13352-2|Q13352-3 Isoform 5 of Centromere protein R HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10826.10826.3 12.33 12.33 2.591 3 1 1 0 555.2981 1583.9157 S110s TMT10 106 (K) LNHPsLTESK (E) LNHPS(0.99)LT(0.0)ES(0.0)K K:TMT10,s:Phosphorylated S ITGB3BP 24900.1 1 3 3166.1 58.82 HUMAN 1 -9.9106 -19.3825 RKKNLQYYDISAKSN-p B5MDF5;Y164-p RKKNLQYYDISAKSN 0.678864300290406 0.36708239185726 -0.0713333333333333 -0.103333333333333 3.1481879661433 5.77143003267386 -0.0713333333333333 -0.103333333333333 0.484374423979677 0.264762819148279 -0.750353533110556 -1.24345133354567 B5MDF5 NotFound B5MDF5.Y164.p_NotFound B5MDF5_Y164y _1_1_164_164 B5MDF5 B5MDF5|P62826|B4DV51 GTP-binding nuclear protein Ran GG20160819_MSz_CCLE_T4D7_pY_Injection_01.20180.20180.2 13.81 13.81 2.545 3 1 1 0 876.9534 1672.931 Y164y TMT10 160 (K) NLQYyDISAK (S) NLQY(0.0)Y(0.99)DIS(0.0)AK K:TMT10,y:Phosphorylated Y RAN 26394.9 2 1 56.1 40.69 HUMAN 1 -3.1482 -5.7714 RKKPLRDSNAPKSPL-p Q9NP66;S100-p RKKPLRDSNAPKSPL 0.740403333746134 0.0219973880959178 0.0523333333333333 -0.328666666666667 2.47614485173472 22.6501703837954 0.0523333333333333 -0.328666666666667 0.56543868110198 0.00543229018940349 0.611843989902812 -4.4673064296814 Q9NP66 HMG20A Q9NP66.S100.p_HMG20A Q9NP66_S100s _1_1_100_100 Q9NP66 Q9NP66 High mobility group protein 20A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12172.12172.2 7.06 7.06 1.153 4 1 1 0 907.457 1733.9384 S100s Hydrogen 99 (R) DsNAPKSPLTGYVR (F) DS(0.99)NAPKS(0.0)PLT(0.0)GY(0.0)VR K:TMT10-Lys-Only,s:Phosphorylated S HMG20A 40142.8 2 1 3406.1 51.81 HUMAN 1 2.4761 -22.6502 RKKPRIDYPPEFHQR-p J3QR07;Y553-p RKKPRIDYPPEFHQR 0.127580448450417 0.00259997565261951 0.392333333333333 -0.835 18.5453382835051 39.4393962938329 0.392333333333333 -0.835 0.0139786802742921 0.000113778543665753 3.57348441521266 -9.88204374922459 J3QR07 YTHDC1 J3QR07.Y553.p_YTHDC1 J3QR07_Y553y _1_1_553_553 J3QR07 J3QR07|Q96MU7|Q96MU7-2 YTH domain-containing protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.17671.17671.4 12.33 4.95 5.156 2 1 1 0 692.3585 2686.4506 Y553y TMT10 551 (R) IDyPPEFHQRPGYLKDPR (Y) IDY(0.99)PPEFHQRPGY(0.0)LKDPR K:TMT10,y:Phosphorylated Y YTHDC1 85871.1 2 2 161.1 20.83 HUMAN 1 18.5453 -39.4394 RKKRRPASGDDLSAK-p Q92564-3;S115-p RKKRRPASGDDLSAK 0.483120816011782 0.0395615477487953 0.223666666666667 -0.302 5.81823081099293 18.8127522584651 0.223666666666667 -0.302 0.261924979686148 0.0131439159758551 1.25211439971102 -3.62552097777701 Q92564 DCUN1D4 Q92564.3.S115.p_DCUN1D4 Q92564-3_S115s _1_1_115_115 Q92564-3 Q92564-3|Q92564-2|D6RAL8|D6RB33 Isoform 3 of DCN1-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5640.5640.3 9.87 9.87 5.228 2 1 1 0 594.9885 1702.9852 S115s Hydrogen 112 (R) RPAsGDDLSAKK (S) RPAS(0.99)GDDLS(0.0)AKK K:TMT10-Lys-Only,s:Phosphorylated S DCUN1D4 38895.2 3 1 5594.1 17.83 HUMAN 1 5.8182 -18.8128 RKKRRTRSRSPESQV-p O95218-2;S305-p RKKRRTRSRSPESQV 0.829514559316201 0.00687614048228366 0.042 0.702 1.56227710121023 31.0138179736017 0.042 0.702 0.697866401475323 0.000791804932143613 0.40952461287449 6.73545535664156 O95218 ZRANB2 O95218.2.S305.p_ZRANB2 O95218-2_T303tS305sS307s_3_3_303_307 O95218-2 O95218-2 Isoform 2 of Zinc finger Ran-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5863.5863.5 11.47 10.67 1.192 5 3 3 0 632.1267 2916.7058 T303t S305s S307s TMT10 300 (K) KRRtRsRsPESQVIGENTK (Q) KRRT(0.99)RS(0.99)RS(0.99)PES(0.0)QVIGENT(0.0)K K:TMT10,t:Phosphorylated T,s:Phosphorylated S ZRANB2 36774.1 8 10 212.1 438.05 HUMAN 1 1.5623 31.0138 RKKRSKPSSSEEDEG-p Q01831;S397-p RKKRSKPSSSEEDEG 0.65110354538022 0.0197234274726644 0.0613333333333333 0.355 3.49655910942393 23.4004269761951 0.0613333333333333 0.355 0.44703763726588 0.00457043253243216 0.819584075497276 4.64441193509936 Q01831 XPC Q01831.S397.p_XPC Q01831_S397sS398sS399s_3_3_397_399 Q01831 Q01831|Q01831-2 DNA repair protein complementing XP-C cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9823.9823.5 10.3 11.21 2.418 4 3 3 0 618.8884 2850.5139 S397s S398s S399s TMT10 394 (R) SKPsssEEDEGPGDKQEK (A) S(0.0)KPS(0.99)S(0.99)S(0.99)EEDEGPGDKQEK K:TMT10,s:Phosphorylated S XPC 106806.6 16 13 780.1 226.3 HUMAN 1 3.4966 23.4004 RKKSKGDSDISDEEA-p Q5T200;S1014-p RKKSKGDSDISDEEA 0.154450690078266 0.189277432033007 -0.376333333333333 -0.142833333333333 16.3030252962139 9.50658905233458 -0.376333333333333 -0.142833333333333 0.0234259639370539 0.112031743502725 -3.12659266018202 -1.895375966348 Q5T200 ZC3H13 Q5T200.S1014.p_ZC3H13 Q5T200_S1014sS1017s_2_2_1014_1017 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9468.9468.5 13.53 13.53 3.061 4 2 2 0 672.153 3196.8034 S1014s S1017s TMT10 1009 (K) KSKGDsDIsDEEAAQQSKK (K) KS(0.0)KGDS(0.99)DIS(0.99)DEEAAQQS(0.0)KK K:TMT10,s:Phosphorylated S ZC3H13 197316.7 16 43 24.1 987.82 HUMAN 2 -16.303 -9.5066 RKKTLCGTPNYIAPE-p P53350;T214-p RKKTLCGTPNYIAPE 0.306379665118902 0.0166813759068686 -0.211 -0.668333333333333 9.62919571824694 24.5469676305088 -0.211 -0.668333333333334 0.108913177393092 0.00350996864560021 -1.91735476990834 -4.92394408778264 P53350 PLK1 P53350.T214.p_PLK1 P53350_T214t _1_1_214_214 P53350 P53350 Serine/threonine-protein kinase PLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26167.26167.3 19.18 19.18 2.672 4 1 1 0 767.7372 2221.2303 T214t TMT10 210 (K) TLCGtPNYIAPEVLSK (K) T(0.0)LCGT(0.99)PNY(0.0)IAPEVLS(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T PLK1 68995.2 9 1 2769.1 71.24 HUMAN 1 -9.6292 -24.547 RKKTVSASESEDRLV-p Q9ULG6-5;S188-p RKKTVSASESEDRLV 0.045900649404995 0.00179491522816465 -0.509333333333333 -1.05166666666667 29.7311589014662 43.2735120580526 -0.509333333333333 -1.05166666666667 0.00106385909281717 4.70596609823017e-05 -6.35074326439179 -11.706464788874 Q9ULG6 CCPG1 Q9ULG6.5.S188.p_CCPG1 Q9ULG6-5_S186sS188s_2_2_186_188 Q9ULG6-5 Q9ULG6-5|Q9ULG6-2|Q9ULG6-4|Q9ULG6-3 Isoform 5 of Cell cycle progression protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15875.15875.3 12.17 12.17 2.459 6 2 2 0 970.7852 2750.4096 S186s S188s TMT10 184 (K) TVsAsESEDRLVAEQETEPSK (E) T(0.0)VS(0.99)AS(0.99)ES(0.0)EDRLVAEQET(0.0)EPS(0.0)K K:TMT10,s:Phosphorylated S CCPG1 94171.2 5 2 3887.1 41.36 HUMAN 1 -29.7312 -43.2735 RKKYNDDSDDSYFTS-p Q9NP61;S345-p RKKYNDDSDDSYFTS 0.996421434325015 0.79953327590994 0.000666666666666667 -0.0276666666666666 0.0278754319989482 1.35891224964838 0.000666666666666667 -0.0276666666666666 0.993601999507517 0.731322230272778 0.00839585411588944 -0.361595708982251 Q9NP61 ARFGAP3 Q9NP61.S345.p_ARFGAP3 Q9NP61_S345s _1_1_345_345 Q9NP61 Q9NP61|Q9NP61-2 ADP-ribosylation factor GTPase-activating protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24216.24216.3 14.74 14.74 1.198 10 1 1 0 1168.8511 3424.5745 S345s TMT10 340 (K) KYNDDsDDSYFTSSSSYFDEPVELR (S) KY(0.0)NDDS(0.99)DDS(0.0)Y(0.0)FT(0.0)S(0.0)S(0.0)S(0.0)S(0.0)Y(0.0)FDEPVELR K:TMT10,s:Phosphorylated S ARFGAP3 57440.9 2 2 2396.1 85.33 HUMAN 1 0.0279 -1.3589 RKKYNPPSWEHRGQP-p O95248-4;S1077-p RKKYNPPSWEHRGQP 0.0658837618616825 0.124245590642598 -0.477 -0.205 25.4665177116081 11.947890839269 -0.477 -0.205 0.00284019545974963 0.063857353554247 -5.16291004474769 -2.32194264730067 O95248 SBF1 O95248.4.S1077.p_SBF1 O95248-4_S1077s _1_1_1077_1077 O95248-4 O95248-4|G5E933 Isoform 4 of Myotubularin-related protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9937.9937.4 11.89 11.89 8.717 2 1 1 0 463.7384 1771.9644 S1077s TMT10 1072 (K) KYNPPsWEHR (G) KY(0.0)NPPS(0.99)WEHR K:TMT10,s:Phosphorylated S SBF1 213155.5 1 2 1740.1 118.23 HUMAN 1 -25.4665 -11.9479 RKLAEVGSHEKVGQH-p Q99640;S160-p RKLAEVGSHEKVGQH 0.268882767582247 0.0192035253059585 -0.242333333333333 -0.475666666666667 10.816162405222 23.5976673749222 -0.242333333333333 -0.475666666666667 0.0828674088907275 0.00436750350825384 -2.1239327570024 -4.69172160740829 Q99640 PKMYT1 Q99640.S160.p_PKMYT1 Q99640_S160s _1_1_160_160 Q99640 B4DZM6|Q99640|Q99640-3|Q99640-2|A6NHV6|Q99640-4 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8342.8342.3 14.71 14.71 99 1 1 1 0 622.3551 1785.0837 S160s TMT10 154 (R) KLAEVGsHEK (V) KLAEVGS(1.0)HEK K:TMT10,s:Phosphorylated S PKMYT1 55090.9 3 8 926.1 199.78 HUMAN 1 -10.8162 -23.5977 RKLDEDASPNEEKGD-p Q9H0B6;S151-p RKLDEDASPNEEKGD 0.149214344489706 0.0283487985085973 -0.531666666666667 0.290666666666667 16.6555295467217 20.9626730979211 -0.531666666666667 0.290666666666667 0.0215996664828437 0.0080118477952426 -3.19509289393904 4.08460512145898 Q9H0B6 KLC2 Q9H0B6.S151.p_KLC2 Q9H0B6_S151s _1_1_151_151 Q9H0B6 Q9H0B6|A8MZ87|A8MX29 Kinesin light chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9342.9342.3 15.09 8.64 99 1 1 1 0 714.7028 2062.1271 S151s TMT10 145 (R) KLDEDAsPNEEK (G) KLDEDAS(1.0)PNEEK K:TMT10,s:Phosphorylated S KLC2 69332.8 1 1 1131.1 174.01 HUMAN 1 -16.6555 20.9627 RKLDNGGYYITTRAQ-p J3QRU1;Y227-p RKLDNGGYYITTRAQ 0.497175098488218 0.217906969082404 0.108333333333333 0.157666666666667 5.58980686325113 8.70813345305972 0.108333333333333 0.157666666666667 0.276070062565674 0.134643891343122 1.21112970278378 1.75723050506409 J3QRU1 NotFound J3QRU1.Y227.p_NotFound J3QRU1_Y227y _1_1_227_227 J3QRU1 P06241|P06241-2|P06241-3|J3QRU1|P07947 Tyrosine-protein kinase GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11171.11479.2 18.07 10.85 2.152 4 1 1 0 855.4275 1629.8798 Y227y Hydrogen 221 (R) KLDNGGyYITTR (A) KLDNGGY(0.99)Y(0.0)IT(0.0)T(0.0)R K:TMT10-Lys-Only,y:Phosphorylated Y YES1 61899.4 14 2 4.1 124.38 HUMAN 1 5.5898 8.7081 RKLDRLAYIAHPKLG-p P47914;Y98-p RKLDRLAYIAHPKLG 0.866370368858268 0.185576010457177 0.0353333333333333 -0.246 1.21258428600207 9.61858698476017 0.0353333333333333 -0.246 0.756382672665263 0.109179550392335 0.326384566478653 -1.91477398893919 P47914 RPL29 P47914.Y98.p_RPL29 P47914_Y98y _1_1_98_98 P47914 P47914 60S ribosomal protein L29 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16541.16541.3 8.84 8.84 99 1 1 1 0 484.28 1370.856 Y98y TMT10 96 (R) LAyIAHPK (L) LAY(1.0)IAHPK K:TMT10,y:Phosphorylated Y RPL29 17808.8 1 1 377.1 8.84 HUMAN 1 1.2126 -9.6186 RKLEEVLSTEGAEEN-p O15355;S527-p RKLEEVLSTEGAEEN 0.471941186312508 0.382559884498192 0.101666666666667 -0.0906666666666667 6.01676249526095 5.54368299271735 0.101666666666667 -0.0906666666666667 0.250220997160098 0.279017665508193 1.28754915172701 -1.20255793175049 O15355 PPM1G O15355.S527.p_PPM1G O15355_S527s_1_1_527_527 O15355 O15355 Protein phosphatase 1G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16454.16454.4 15.37 15.37 1.171 3 1 1 0 794.4177 3093.7085 S527s N534n TMT10 521 (R) KLEEVLsTEGAEEnGNSDKK (K) KLEEVLS(0.99)T(0.0)EGAEEN(0.99)GN(0.0)S(0.0)DKK K:TMT10,s:Phosphorylated S,n:Deamidated PPM1G 59955.3 6 4 1835.1 112.03 HUMAN 1 6.0168 -5.5437 RKLEGARSPLNGDQQ-p Q96JK9;S170-p RKLEGARSPLNGDQQ 0.136120325935342 0.0760892956053193 0.354 0.212333333333333 17.7675058184516 14.847467780057 0.354 0.212333333333333 0.0167205060819378 0.0327531611496066 3.41536490099852 2.84805694546934 Q96JK9 MAML3 Q96JK9.S170.p_MAML3 Q96JK9_S170s _1_1_170_170 Q96JK9 Q96JK9 Mastermind-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10467.10467.4 26.18 26.18 11.465 4 1 1 0 847.4124 3306.6537 S170s Hydrogen 164 (R) KLEGARsPLNGDQQNGACDGNFSPTSK (R) KLEGARS(0.99)PLNGDQQNGACDGNFS(0.0)PT(0.0)S(0.0)K K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S MAML3 122747.3 2 2 4494.1 30.73 HUMAN 1 17.7675 14.8475 RKLERVQSGLDLFSM-p Q13158;S41-p RKLERVQSGLDLFSM 0.972247636963192 0.451534163853148 0.00833333333333333 0.227333333333333 0.236965440914824 4.60261629791845 0.00833333333333334 0.227333333333333 0.946898559588329 0.346528030459924 0.0697489715331145 1.03051011830698 Q13158 FADD Q13158.S41.p_FADD Q13158_S41s _1_1_41_41 Q13158 Q13158 FAS-associated death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37615.37615.3 18.49 18.49 4.936 3 1 1 0 1088.5463 3183.6557 S41s TMT10 39 (R) VQsGLDLFSMLLEQNDLEPGHTELLR (E) VQS(0.99)GLDLFS(0.0)MLLEQNDLEPGHT(0.0)ELLR s:Phosphorylated S FADD 23507.2 2 1 4363.1 32.74 HUMAN 1 0.237 4.6026 RKLGFTQSQIDEIDH-p Q13546;S610-p RKLGFTQSQIDEIDH 0.620003001212767 0.620586312762135 -0.0806666666666667 0.059 3.85826077459 2.81851758913416 -0.0806666666666667 0.059 0.41131440780356 0.52257453295722 -0.889937212567708 0.683211190418076 Q13546 RIPK1 Q13546.S610.p_RIPK1 Q13546_S610s _1_1_610_610 Q13546 Q13546|Q13546-2 Receptor-interacting serine/threonine-protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24148.24148.4 16.7 16.7 2.498 3 1 1 0 755.124 2937.4994 S610s TMT10 605 (K) LGFTQsQIDEIDHDYERDGLK (E) LGFT(0.0)QS(0.99)QIDEIDHDY(0.0)ERDGLK K:TMT10,s:Phosphorylated S RIPK1 76500.1 3 1 4405.1 31.93 HUMAN 1 -3.8583 2.8185 RKLGQSESQGPPRAF-p O00233;S129-p RKLGQSESQGPPRAF 0.234787342649998 0.0464065578708671 0.191333333333333 -0.303333333333333 12.0654647928412 17.8402269503074 0.191333333333333 -0.303333333333333 0.0621517727807797 0.0164428579513322 2.34395159787895 -3.42722777666203 O00233 PSMD9 O00233.S129.p_PSMD9 O00233_S129s _1_1_129_129 O00233 O00233|J3KN29|O00233-2|F5GX23|F5H169 26S proteasome non-ATPase regulatory subunit 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6850.6850.3 13.18 13.18 2.538 2 1 1 0 607.9931 1741.9961 S129s TMT10 123 (R) KLGQSEsQGPPR (A) KLGQS(0.0)ES(0.99)QGPPR K:TMT10,s:Phosphorylated S PSMD9 24852.5 2 1 6206.1 13.18 HUMAN 1 12.0655 -17.8402 RKLGRRPSSSEIITE-p Q9BQF6-5;S11-p RKLGRRPSSSEIITE 0.166553758928775 0.0057354115382082 -0.250333333333333 0.504333333333333 15.5711070709961 32.4450067239848 -0.250333333333333 0.504333333333333 0.0277261324074087 0.000569507342384817 -2.98626484690454 7.19926819680042 Q9BQF6 SENP7 Q9BQF6.5.S11.p_SENP7 Q9BQF6-5_S11s _1_1_11_11 Q9BQF6-5 Q9BQF6|J3QT09|Q9BQF6-5 Isoform 5 of Sentrin-specific protease 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11254.11254.2 10.56 10.56 1.105 4 1 1 0 921.4922 1762.0111 S11s TMT10 9 (R) RPsSSEIITEGK (R) RPS(0.99)S(0.0)S(0.0)EIIT(0.0)EGK K:TMT10,s:Phosphorylated S SENP7 113127.1 4 3 1683.1 121.31 HUMAN 1 -15.5711 32.445 RKLHLEDSATTRATL-p Q9NYQ6;S2726-p RKLHLEDSATTRATL 0.626617753150603 0.0218530636857154 0.0796666666666666 -0.391 3.77069256924224 22.6964122797075 0.0796666666666667 -0.391 0.419692050379165 0.0053747562331435 0.873035415936579 -4.47809408163642 Q9NYQ6 CELSR1 Q9NYQ6.S2726.p_CELSR1 Q9NYQ6_S2726s _1_1_2726_2726 Q9NYQ6 Q9NYQ6 Cadherin EGF LAG seven-pass G-type receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8732.8732.4 12.85 11.68 1.126 3 1 1 0 452.9979 1729.0009 S2726s TMT10 2720 (R) KLHLEDsATTR (A) KLHLEDS(0.99)AT(0.0)T(0.0)R K:TMT10,s:Phosphorylated S CELSR1 334558.1 1 1 1317.1 154.7 HUMAN 1 3.7707 -22.6964 RKLKAEKSPKAKINE-p P07814;S845-p RKLKAEKSPKAKINE 0.203756827794153 0.0666530516700962 0.224 -0.257 13.3864106173362 15.6427378941917 0.224 -0.257 0.0458520691041436 0.0272725791343954 2.58093478651705 -2.9978290102422 P07814 EPRS P07814.S845.p_EPRS P07814_S845s _1_1_845_845 P07814 P07814 Bifunctional glutamate/proline--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8610.8610.2 10.89 6.91 99 1 1 1 0 949.0887 1817.203 S845s TMT10 840 (K) LKAEKsPK (A) LKAEKS(1.0)PK K:TMT10,s:Phosphorylated S EPRS 172185.3 5 8 375.1 337.76 HUMAN 1 13.3864 -15.6427 RKLMGIKSEDEAGCS-p Q7L4I2;S376-p RKLMGIKSEDEAGCS 0.839353804661943 0.610415755464269 -0.0296666666666667 0.0526666666666667 1.47106097133433 2.91266187844163 -0.0296666666666667 0.0526666666666667 0.712678903056896 0.511368311519236 -0.388194660046957 0.702519455106016 Q7L4I2 RSRC2 Q7L4I2.S376.p_RSRC2 Q7L4I2_S376s _1_1_376_376 Q7L4I2 Q7L4I2|Q7L4I2-2 Arginine/serine-rich coiled-coil protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19171.19171.4 15.47 15.47 3.733 5 1 1 0 776.1209 3021.5 S376s TMT10 371 (K) LMGIKsEDEAGCSSVDEESYK (T) LMGIKS(0.99)EDEAGCS(0.0)S(0.0)VDEES(0.0)Y(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RSRC2 50615.9 2 7 1070.1 180.75 HUMAN 1 -1.4711 2.9127 RKLNEVQSFSEAQTE-p Q96C92;S290-p RKLNEVQSFSEAQTE 0.519727553846798 0.980917315900319 0.140666666666667 0.00333333333333335 5.24946304306717 0.119428061097266 0.140666666666667 0.00333333333333334 0.298575175116882 0.972875336990153 1.14958328779136 0.035599832233049 Q96C92 SDCCAG3 Q96C92.S290.p_SDCCAG3 Q96C92_S290s _1_1_290_290 Q96C92 Q96C92|Q96C92-2|Q96C92-3|Q96C92-4 Serologically defined colon cancer antigen 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21615.21615.3 15.27 15.27 1.943 3 1 1 0 726.3465 2097.0484 S290s TMT10 285 (K) LNEVQsFSEAQTEMVR (T) LNEVQS(0.99)FS(0.0)EAQT(0.0)EMVR s:Phosphorylated S SDCCAG3 48302.7 1 4 1849.1 111.15 HUMAN 1 5.2495 0.1194 RKLPPNLSPTIEYND-p P25054;S2512-p RKLPPNLSPTIEYND 0.62053038171775 0.268187135286565 -0.0666666666666667 -0.109666666666667 3.85157277810611 7.5276197494658 -0.0666666666666667 -0.109666666666667 0.411948306837757 0.176700600351945 -0.888649146834141 -1.55262831482184 P25054 APC P25054.S2512.p_APC P25054_S2512s _1_1_2512_2512 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17302.17542.4 16.1 16.1 2.001 3 1 1 0 720.1525 2797.6179 S2512s TMT10 2506 (R) KLPPNLsPTIEYNDGRPAK (R) KLPPNLS(0.99)PT(0.0)IEY(0.0)NDGRPAK K:TMT10,s:Phosphorylated S APC 313808.5 6 43 33.1 890.71 HUMAN 1 -3.8516 -7.5276 RKLQRLNSCETKSST-p Q5T5Y3-3;S838-p RKLQRLNSCETKSST 0.104709651653521 0.720497558437245 0.444666666666667 0.0373333333333334 20.6589628992948 1.96194105007195 0.444666666666667 0.0373333333333334 0.00859218679513747 0.636510973012021 4.02181987755186 0.500299336610742 Q5T5Y3 CAMSAP1 Q5T5Y3.3.S838.p_CAMSAP1 Q5T5Y3-3_S838s _1_1_838_838 Q5T5Y3-3 Q5T5Y3-3|Q5T5Y3-2 Isoform 3 of Calmodulin-regulated spectrin-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8824.8824.2 10.13 4.86 3.182 2 1 1 0 695.3467 1309.7186 S838s TMT10 836 (R) LNsCETK (S) LNS(0.99)CET(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CAMSAP1 180710.7 5 9 220.1 428.42 HUMAN 1 20.659 1.9619 RKLQRNESEPSEMKA-p A7KAX9;S682-p RKLQRNESEPSEMKA 0.560135693219576 0.0284736929295266 0.078 0.309 4.64133634918351 20.9359142931497 0.078 0.309 0.343452249399521 0.00806136472593822 1.03790105532938 4.07870240319533 A7KAX9 ARHGAP32 A7KAX9.S682.p_ARHGAP32 A7KAX9_S682s _1_1_682_682 A7KAX9 A7KAX9|A7KAX9-2|G3V174 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6421.6421.2 10.16 10.16 6.227 2 1 1 0 680.2891 1279.6037 S682s Hydrogen 680 (R) NEsEPSEMK (A) NES(0.99)EPS(0.0)EMK K:TMT10-Lys-Only,s:Phosphorylated S ARHGAP32 232236.5 5 9 159.1 497.4 HUMAN 1 4.6413 20.9359 RKLRSIHSFELEKRL-p Q8IWY7;S853-p RKLRSIHSFELEKRL 0.155823496231451 0.248849513583655 -0.259333333333333 -0.157666666666667 16.2266334101284 7.95842308706743 -0.259333333333333 -0.157666666666667 0.0238416692594477 0.160013892978528 -3.11182808509144 -1.62743426602318 Q8IWY7 TTBK2 Q8IWY7.S853.p_TTBK2 Q8IWY7_S853s _1_1_853_853 Q8IWY7 Q8IWY7|Q6IQ55|Q6IQ55-2 Tau-tubulin kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17341.17341.3 16.86 15.7 4.828 2 1 1 0 543.2883 1547.8834 S853s TMT10 850 (R) SIHsFELEK (R) S(0.0)IHS(0.99)FELEK K:TMT10,s:Phosphorylated S TTBK2 184004.2 1 1 1983.1 104.1 HUMAN 1 -16.2266 -7.9584 RKLSAPVSQKMHRKI-p Q9P1T7-1;S237-p RKLSAPVSQKMHRKI 0.757838648247001 0.0332693129059235 0.048 -0.313333333333333 2.30534329530435 19.9240452663151 0.048 -0.313333333333333 0.588119623410726 0.0101764305571825 0.575408803869914 -3.85907499348946 Q9P1T7 MDFIC Q9P1T7.1.S237.p_MDFIC Q9P1T7-1_S237s _1_1_237_237 Q9P1T7-1 Q9P1T7-1|J3KN13 Isoform 1 of MyoD family inhibitor domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13122.13122.2 8.9 3.89 2.429 2 1 1 0 684.3903 1287.8037 S237s TMT10 232 (K) LSAPVsQK (M) LS(0.0)APVS(0.99)QK K:TMT10,s:Phosphorylated S MDFIC 38638.9 2 1 2928.1 65.75 HUMAN 1 2.3053 -19.924 RKLSRRWSAPAAAGQ-p C9JI98;S124-p RKLSRRWSAPAAAGQ 0.107444119760209 0.311968372906276 -0.653666666666667 0.627333333333333 20.3997709564236 6.6861508659399 -0.653666666666667 0.627333333333334 0.00912058939375943 0.214479067810216 -3.96527564273939 1.40558478645897 C9JI98 TMEM238 C9JI98.S124.p_TMEM238 C9JI98_S124s _1_1_124_124 C9JI98 C9JI98 Transmembrane protein 238 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7679.7679.4 9.1 9.1 9.097 2 1 1 0 512.0156 1965.0728 S124s TMT10 122 (R) RWsAPAAAGQRPAPGSR (R) RWS(0.99)APAAAGQRPAPGS(0.0)R s:Phosphorylated S TMEM238 18153.7 1 1 4240.1 34.92 HUMAN 1 -20.3998 6.6862 RKLTATPTPLGGMTG-p O75533;T436-p RKLTATPTPLGGMTG 0.952789431211013 0.888139576657369 0.00899999999999999 0.0146666666666667 0.414646961494613 0.723849611339506 0.00892161060394044 0.0146666666666667 0.908940183919094 0.846476759614942 0.119831342288702 0.203079141056399 O75533 SF3B1 O75533.T436.p_SF3B1 O75533_T436t _1_1_436_436 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23143.23143.3 22.29 22.29 2.358 5 1 1 0 857.4053 2490.2318 T436t TMT10 431 (K) LTATPtPLGGMTGFHMQTEDR (T) LT(0.0)AT(0.0)PT(0.99)PLGGMT(0.0)GFHMQT(0.0)EDR t:Phosphorylated T SF3B1 146569.5 14 28 53.1 735.77 HUMAN 1 0.4146 0.7238 RKLVIIESDLERAEE-p P09493-4;S174-p RKLVIIESDLERAEE 0.729757185802638 0.102331537175361 0.0493333333333333 0.199 2.59708330609525 13.0743037840232 0.0493333333333333 0.199 0.549910065945918 0.049268531923166 0.6373160350507 2.52307094482193 P09493 TPM1 P09493.4.S174.p_TPM1 P09493-4_S174s _1_1_174_174 P09493-4 P09493-3|P09493-4|P09493-8|P09493-10|B7Z596 Isoform 4 of Tropomyosin alpha-1 chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28656.28656.4 16.13 11.46 6.701 2 1 1 0 738.3823 2870.5421 S174s TMT10 169 (K) LVIIEsDLERAEERAELSEGQVR (Q) LVIIES(0.99)DLERAEERAELS(0.0)EGQVR s:Phosphorylated S TPM1 32847.3 4 5 2271.2 90.46 HUMAN 1 2.5971 13.0743 RKLVRRHSMQTEQIR-p Q69YU3;S473-p RKLVRRHSMQTEQIR 0.30137742196241 0.855194420035551 0.202333333333333 0.02 9.77665461120958 0.957747341929353 0.202333333333333 0.02 0.105277251669138 0.802093996601657 1.94293256105424 0.263220171295413 Q69YU3 ANKRD34A Q69YU3.S473.p_ANKRD34A Q69YU3_S473s _1_1_473_473 Q69YU3 Q69YU3 Ankyrin repeat domain-containing protein 34A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3696.3696.3 12.14 12.14 3.431 2 1 1 0 532.2628 1514.8059 S473s TMT10 471 (R) RHsMQTEQIR (L) RHS(0.99)MQT(0.0)EQIR s:Phosphorylated S ANKRD34A 52919.9 1 11 922.1 199.97 HUMAN 1 9.7767 0.9577 RKMGQLASGIRSSLL-p P46939;S1861-p RKMGQLASGIRSSLL 0.0258916763087389 0.103068850601818 -1.01233333333333 0.257666666666667 36.8297234572294 13.0352482852311 -1.01233333333333 0.257666666666667 0.000207504564453136 0.0497135951756239 -8.81111222645282 2.51603549009913 P46939 UTRN P46939.S1861.p_UTRN P46939_S1861s _1_1_1861_1861 P46939 P46939-2 Utrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.32028.32028.4 14.98 12.18 1.128 5 1 1 0 761.6636 2963.664 S1861s TMT10 1856 (K) MGQLAsGIRSSLLPTDYLVEINK (I) MGQLAS(0.99)GIRS(0.0)S(0.0)LLPT(0.0)DY(0.0)LVEINK K:TMT10,s:Phosphorylated S UTRN 396684.3 2 8 527.1 282.18 HUMAN 1 -36.8297 13.0352 RKMKDTDSEEEIREA-p E7EMB3;S129-p RKMKDTDSEEEIREA 0.626892612694255 0.00963400225198682 -0.119333333333333 0.481 3.76851819129604 28.4243979391536 -0.119333333333333 0.481 0.41990222979941 0.00143734229778071 -0.872614709661052 5.95790595875433 E7EMB3 NotFound E7EMB3.S129.p_NotFound E7EMB3_S129s _1_1_129_129 E7EMB3 E7EMB3|E7ETZ0|P0DP24|Q96HY3|G3V226 Calmodulin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14371.14371.4 12.14 12.14 1.29 2 1 1 0 599.2911 2314.1749 S129s TMT10 124 (K) MKDTDsEEEIREAFR (V) MKDT(0.0)DS(0.99)EEEIREAFR K:TMT10,s:Phosphorylated S CALM2 21860.1 3 3 2687.1 73.97 HUMAN 1 -3.7685 28.4244 RKMNDSNSAGAGGPV-p Q92930;S182-p RKMNDSNSAGAGGPV 0.810690999381857 0.213740919505277 0.038 0.185333333333333 1.75072011999696 8.81657099646156 0.038 0.185333333333333 0.668233106139946 0.131323636507472 0.452861112362778 1.77598633229457 Q92930 RAB8B Q92930.S182.p_RAB8B Q92930_S182s _1_1_182_182 Q92930 Q92930 Ras-related protein Rab-8B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9861.9861.3 14.45 14.45 2.409 2 1 1 0 614.966 1762.9158 S182s TMT10 177 (K) MNDSNsAGAGGPVK (I) MNDS(0.0)NS(0.99)AGAGGPVK K:TMT10,s:Phosphorylated S RAB8B 23754.8 2 17 2008.6 102.72 HUMAN 1 1.7507 8.8166 RKNANGGYVCNACGL-p Q9UHF7-2;Y928-p RKNANGGYVCNACGL 0.615350842498504 0.107027683362565 0.094 -0.237333333333333 3.91333132707697 12.822378552401 0.094 -0.237333333333333 0.406131679684375 0.0522110160379534 0.900526164160049 -2.47777190954987 Q9UHF7 TRPS1 Q9UHF7.2.Y928.p_TRPS1 Q9UHF7-2_Y928y _1_1_928_928 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3 Isoform 2 of Zinc finger transcription factor Trps1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.16412.16412.3 23.52 23.52 23.518 2 1 1 0 776.3615 2247.1051 Y928y TMT10 923 (K) NANGGyVCNACGLYQK (L) NANGGY(0.99)VCNACGLY(0.0)QK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y TRPS1 145246 2 3 25.1 68.03 HUMAN 1 3.9133 -12.8224 RKNPTRWSTTAGFLK-p Q8TEW0;S174-p RKNPTRWSTTAGFLK 0.485292660991449 0.788423890521773 0.167 0.0306666666666667 5.78610300629471 1.43401190125854 0.167 0.0306666666666667 0.263869806973005 0.718784676333057 1.24636429912997 0.379421980675331 Q8TEW0 PARD3 Q8TEW0.S174.p_PARD3 Q8TEW0_S174s _1_1_174_174 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11|Q8TEW0-4|Q8TEW0-6|Q5VWV2|Q8TEW0-7|Q8TEW0-3|Q8TEW0-5|Q8TEW0-8|Q5VWU8|Q8TEW0-10|Q8TEW0-9 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26640.26640.2 13.08 13.08 1.112 3 1 1 0 774.9155 1468.8564 S174s TMT10 173 (R) WsTTAGFLK (Q) WS(0.99)T(0.0)T(0.0)AGFLK K:TMT10,s:Phosphorylated S PARD3 151933.9 7 4 65.1 692.2 HUMAN 1 5.7861 1.434 RKNQDEESQEAPELL-p Q8NE71;S595-p RKNQDEESQEAPELL 0.904222813932841 0.0603984147486401 -0.0263333333333333 0.355333333333333 0.859185314730432 16.2372721367395 -0.0263333333333334 0.355333333333333 0.820505447046998 0.0237833368159987 -0.238173740874511 3.11164338501572 Q8NE71 ABCF1 Q8NE71.S595.p_ABCF1 Q8NE71_S595s _1_1_595_595 Q8NE71 Q8NE71|Q8NE71-2 ATP-binding cassette sub-family F member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17470.17470.3 12.6 12.6 99 1 1 1 0 723.3579 2088.0861 S595s TMT10 590 (K) NQDEEsQEAPELLK (R) NQDEES(1.0)QEAPELLK K:TMT10,s:Phosphorylated S ABCF1 96380.4 1 7 203.1 449.36 HUMAN 1 -0.8592 16.2373 RKNRWDETPKTERDT-p O75533;T296-p RKNRWDETPKTERDT 0.643173153319585 0.0123347901426189 0.0646666666666667 0.511333333333333 3.58302747162952 26.6542500662813 0.0646666666666667 0.511333333333334 0.438225104068501 0.00216060309252498 0.836535706048151 5.46790119663354 O75533 SF3B1 O75533.T296.p_SF3B1 O75533_T296t _1_1_296_296 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8217.8217.5 10.58 10.58 10.582 5 1 1 0 684.5322 3338.6667 T296t TMT10 291 (K) NRWDEtPKTERDTPGHGSGWAETPR (T) NRWDET(0.99)PKT(0.0)ERDT(0.0)PGHGS(0.0)GWAET(0.0)PR K:TMT10,t:Phosphorylated T SF3B1 146569.5 4 19 53.1 735.77 HUMAN 1 3.583 26.6543 RKNSSRDSGRGDSVS-p Q53EL6;S71-p RKNSSRDSGRGDSVS 0.835210572147612 0.414866623450841 0.049 -0.116333333333333 1.50984746066147 5.08279123617513 0.049 -0.116333333333333 0.70634236302963 0.3102564910488 0.397293737483624 -1.11897926587526 Q53EL6 PDCD4 Q53EL6.S71.p_PDCD4 Q53EL6_S71s _1_1_71_71 Q53EL6 Q53EL6|Q53EL6-2 Programmed cell death protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4736.4736.4 17.81 17.81 1.299 7 1 1 0 609.2751 2354.113 S71s TMT10 66 (K) NSSRDsGRGDSVSDSGSDALR (S) NS(0.0)S(0.0)RDS(0.99)GRGDS(0.0)VS(0.0)DS(0.0)GS(0.0)DALR s:Phosphorylated S PDCD4 52133.7 4 4 476.1 301.17 HUMAN 1 1.5098 -5.0828 RKPERKPSDEEFASR-p Q14155-5;S601-p RKPERKPSDEEFASR 0.0930623897669081 0.315736307890648 -0.494 -0.142666666666667 21.924311884383 6.61512432196311 -0.494 -0.142666666666667 0.00642049942716102 0.218015598673338 -4.3046427904342 -1.39309597640676 Q14155 ARHGEF7 Q14155.5.S601.p_ARHGEF7 Q14155-5_S601s _1_1_601_601 Q14155-5 Q14155|Q14155-3|Q14155-2|Q14155-5|B1ALK7|Q14155-1|Q14155-6|E9PDQ5 Isoform 5 of Rho guanine nucleotide exchange factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8467.8467.2 11.53 8.24 3.656 2 1 1 0 852.4234 1623.8743 S601s TMT10 599 (R) KPsDEEFASR (K) KPS(0.99)DEEFAS(0.0)R K:TMT10,s:Phosphorylated S ARHGEF7 83311.3 6 8 434.1 313.68 HUMAN 1 -21.9243 -6.6151 RKPFSVSSTPTMSRS-p P82094-2;S931-p RKPFSVSSTPTMSRS 0.153364244244344 0.0527171545383055 0.238333333333333 0.259333333333333 16.3726282669961 17.0506452361854 0.238333333333333 0.259333333333333 0.0230535161184824 0.0197212971282344 3.14006977044065 3.27011540008824 P82094 TMF1 P82094.2.S931.p_TMF1 P82094-2_S931sT932t_2_2_931_932 P82094-2 P82094|P82094-2 Isoform 2 of TATA element modulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12302.12760.2 11.29 11.29 1.107 6 2 2 0 907.4112 1653.8832 S931s T932t Hydrogen 925 (R) KPFSVSstPTMSR (S) KPFS(0.0)VS(0.0)S(0.99)T(0.99)PT(0.0)MS(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T TMF1 123666.4 7 25 393.1 331.84 HUMAN 1 16.3726 17.0506 RKPGPPLSPEIRSPA-p Q96JM3;S427-p RKPGPPLSPEIRSPA 0.82619699417303 0.0434887195464555 0.0323333333333333 0.334 1.60117730483712 18.2448612144724 0.0323333333333333 0.334 0.691643451713916 0.0149800712341759 0.41854929558168 3.50906888538361 Q96JM3 CHAMP1 Q96JM3.S427.p_CHAMP1 Q96JM3_S427s _1_1_427_427 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19826.20030.4 13.94 10.41 1.186 2 1 1 0 694.3984 2694.6071 S427s TMT10 411 (K) AVPPVSPELRKPGPPLsPEIR (S) AVPPVS(0.0)PELRKPGPPLS(0.99)PEIR K:TMT10,s:Phosphorylated S CHAMP1 90067.4 15 21 25.1 950.05 HUMAN 1 1.6012 18.2449 RKPKTQQSPISNGSP-p Q15723;S185-p RKPKTQQSPISNGSP 0.589571770794032 0.0199037089525882 0.0723333333333333 -0.333 4.22704313509163 23.3315677410166 0.0723333333333333 -0.333 0.377829345955347 0.00464347622108583 0.960287853246991 -4.62796992772228 Q15723 ELF2 Q15723.S185.p_ELF2 Q15723_S185s _1_1_185_185 Q15723 Q15723|Q15723-1|Q15723-3|Q15723-2 ETS-related transcription factor Elf-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17471.17471.3 12.01 12.01 1.134 4 1 1 0 732.0547 2114.1858 S185s TMT10 182 (K) TQQsPISNGSPELGIK (K) T(0.0)QQS(0.99)PIS(0.0)NGS(0.0)PELGIK K:TMT10,s:Phosphorylated S ELF2 64422.1 2 2 1339.1 152.08 HUMAN 1 4.227 -23.3316 RKPKVIRSDGAPAEG-p Q13769;S16-p RKPKVIRSDGAPAEG 0.168851864469139 0.0989828254601126 0.344666666666667 -0.191333333333333 15.4072293382916 13.2750974693816 0.344666666666667 -0.191333333333333 0.0287923468977893 0.0470424847789955 2.95518205418276 -2.55931833028134 Q13769 THOC5 Q13769.S16.p_THOC5 Q13769_S16s _1_1_16_16 Q13769 Q13769|F8WCP5|F5GZF3|F8WES8 THO complex subunit 5 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6412.6412.3 11.72 9.18 99 1 1 1 0 632.0142 1814.0649 S16s TMT10 13 (K) VIRsDGAPAEGKR (N) VIRS(1.0)DGAPAEGKR K:TMT10,s:Phosphorylated S THOC5 79248.1 2 1 2086.1 98.12 HUMAN 1 15.4072 -13.2751 RKPKYVESPRVPGDA-p Q9C0D5;S97-p RKPKYVESPRVPGDA 0.465135171359363 0.606197232379905 0.103 -0.0693333333333333 6.13461054392132 2.95055350246587 0.103 -0.0693333333333334 0.243522417029107 0.506926097109402 1.30850806667659 -0.710252392355913 Q9C0D5 TANC1 Q9C0D5.S97.p_TANC1 Q9C0D5_S97s _1_1_97_97 Q9C0D5 Q9C0D5|Q9C0D5-2 Protein TANC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24726.24726.3 9.94 9.94 9.941 2 1 1 0 748.0483 2162.163 S97s TMT10 94 (K) YVEsPRVPGDAVIMPFR (E) Y(0.0)VES(0.99)PRVPGDAVIMPFR s:Phosphorylated S TANC1 204383.7 1 4 678.1 246.63 HUMAN 1 6.1346 -2.9506 RKPLEIRSPSAESKK-p Q96B01;S294-p RKPLEIRSPSAESKK 0.167787448802573 0.00105578872948118 -0.240666666666667 -1.16133333333333 15.4834989426247 50.6164790774228 -0.240666666666667 -1.16133333333333 0.0282911177147437 8.67665026148312e-06 -2.96963327712878 -16.1162621794018 Q96B01 RAD51AP1 Q96B01.S294.p_RAD51AP1 Q96B01_S294s _1_1_294_294 Q96B01 Q96B01|Q96B01-2 RAD51-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14105.14105.5 13.33 9.14 1.226 8 1 1 0 631.9513 3075.7617 S294s TMT10 279 (K) VSLSSDTTRKPLEIRsPSAESK (K) VS(0.0)LS(0.0)S(0.0)DT(0.0)T(0.0)RKPLEIRS(0.99)PS(0.0)AES(0.0)K K:TMT10,s:Phosphorylated S RAD51AP1 38684.9 3 4 1345.1 151.31 HUMAN 1 -15.4835 -50.6165 RKPLRPDSLIIYRQK-p Q1W6H9;S99-p RKPLRPDSLIIYRQK 0.853677520289608 0.179065094415602 0.0473333333333333 -0.223 1.33190167591121 9.82435102317735 0.0473333333333333 -0.223 0.735884799863496 0.104127369606276 0.355178408569238 -1.95043659662519 Q1W6H9 FAM110C Q1W6H9.S99.p_FAM110C Q1W6H9_S99s _1_1_99_99 Q1W6H9 Q1W6H9 Protein FAM110C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17782.17782.3 12.22 12.22 8.632 2 1 1 0 670.3968 1929.205 S99s TMT10 93 (R) KPLRPDsLIIYR (Q) KPLRPDS(0.99)LIIY(0.0)R K:TMT10,s:Phosphorylated S FAM110C 34147.7 1 1 2986.1 64.03 HUMAN 1 1.3319 -9.8244 RKPNAGGSPAPVRRR-p Q3KQU3;S399-p RKPNAGGSPAPVRRR 0.437266828441152 0.945818175866251 0.138 -0.00799999999999997 6.61695333247519 0.347487628110901 0.138 -0.00799999999999997 0.217923801774288 0.923105284520063 1.39378183986444 -0.101098922134423 Q3KQU3 MAP7D1 Q3KQU3.S399.p_MAP7D1 Q3KQU3_S399s _1_1_399_399 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4603.4603.3 10.17 10.17 99 1 1 1 0 615.6806 1765.0597 S399s TMT10 392 (R) RKPNAGGsPAPVR (R) RKPNAGGS(1.0)PAPVR K:TMT10,s:Phosphorylated S MAP7D1 93160.6 3 13 160.1 495.56 HUMAN 1 6.617 -0.3475 RKPNIFYSGPASPAR-p Q6PL18;S323-p RKPNIFYSGPASPAR 0.114688242267433 0.042983734585329 0.451666666666667 -0.373666666666667 19.5988440760661 18.3134625167157 0.451666666666667 -0.373666666666667 0.01096770075071 0.0147453045980635 3.79338199681854 -3.52303641351999 Q6PL18 ATAD2 Q6PL18.S323.p_ATAD2 Q6PL18_S323sS327s_2_2_323_327 Q6PL18 Q6PL18|Q6PL18-2 ATPase family AAA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15785.15785.4 7.1 7.1 7.102 3 2 2 0 594.8063 2216.2704 S323s S327s TMT10 317 (R) KPNIFYsGPAsPARPR (Y) KPNIFY(0.0)S(0.99)GPAS(0.99)PARPR K:TMT10,s:Phosphorylated S ATAD2 159920.6 2 23 266.1 395.28 HUMAN 1 19.5988 -18.3135 RKPPRTVSVLDPYYR-p Q96S53;S381-p RKPPRTVSVLDPYYR 0.513829023087372 0.0550088980333294 0.101333333333333 0.268 5.34175516791609 16.7817028309203 0.101333333333333 0.268 0.292297084280591 0.0209811706885623 1.16633409257629 3.21734974186834 Q96S53 TESK2 Q96S53.S381.p_TESK2 Q96S53_S381s _1_1_381_381 Q96S53 Q96S53|Q96S53-2|Q96S53-3 Dual specificity testis-specific protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18986.18986.3 13.33 8.24 2.062 4 1 1 0 592.3085 1694.9427 S381s TMT10 379 (R) TVsVLDPYYRPR (D) T(0.0)VS(0.99)VLDPY(0.0)Y(0.0)RPR s:Phosphorylated S TESK2 64265.9 2 3 1787.1 114.9 HUMAN 1 5.3418 16.7817 RKPSPAASPATKKAT-p Q8N3F8;S644-p RKPSPAASPATKKAT 0.445918453479766 0.00773564910804752 -0.157333333333333 -0.498333333333333 6.46958192224247 30.1478609036655 -0.157333333333333 -0.498333333333333 0.225445622910251 0.000966526819850259 -1.3678080026843 -6.46691996376499 Q8N3F8 MICALL1 Q8N3F8.S644.p_MICALL1 Q8N3F8_S644s _1_1_644_644 Q8N3F8 Q8N3F8 MICAL-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5041.5041.3 13.46 13.46 4.387 3 1 1 0 531.6328 1512.915 S644s Hydrogen 638 (R) KPSPAAsPATK (K) KPS(0.0)PAAS(0.99)PAT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S MICALL1 94409.4 3 11 755.1 231.25 HUMAN 1 -6.4696 -30.1479 RKPSPSESPEPWKPF-p Q96JM3;S286-p RKPSPSESPEPWKPF 0.635192177446917 0.0332750897952283 -0.073 0.266666666666667 3.6743248135699 19.9227003854283 -0.073 0.266666666666667 0.42910889650677 0.0101795823831505 -0.854341025898709 3.85878762032071 Q96JM3 CHAMP1 Q96JM3.S286.p_CHAMP1 Q96JM3_S286s _1_1_286_286 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20031.20031.5 18.73 18.73 2.796 4 1 1 0 643.5454 3133.7289 S286s TMT10 280 (R) KPSPSEsPEPWKPFPAVSPEPR (R) KPS(0.0)PS(0.0)ES(0.99)PEPWKPFPAVS(0.0)PEPR K:TMT10,s:Phosphorylated S CHAMP1 90067.4 6 11 25.1 950.05 HUMAN 1 -3.6743 19.9227 RKPSTPLSEVIVKNL-p Q92547;S864-p RKPSTPLSEVIVKNL 0.672055923167882 0.0464336108867438 0.132333333333333 -0.330666666666667 3.23216685875393 17.8346364497439 0.132333333333333 -0.330666666666667 0.475098122449199 0.016464037819096 0.767186110824675 -3.42610347842516 Q92547 TOPBP1 Q92547.S864.p_TOPBP1 Q92547_S864s _1_1_864_864 Q92547 Q92547 DNA topoisomerase 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15899.15899.4 7.31 6.36 1.561 3 1 1 0 556.0898 2141.3625 S864s TMT10 857 (K) RKPSTPLsEVIVK (N) RKPS(0.0)T(0.0)PLS(0.99)EVIVK K:TMT10,s:Phosphorylated S TOPBP1 172786.5 1 9 1135.1 173.67 HUMAN 1 3.2322 -17.8346 RKPTAEASPVKASRS-p Q6ZRI6;S586-p RKPTAEASPVKASRS 0.0778192953261892 0.00295525371037851 -0.438666666666667 -0.811333333333333 23.697004555711 38.1149720032805 -0.438666666666667 -0.811333333333333 0.00426873843505828 0.000154348637335096 -4.72115879941931 -9.31499004322703 Q6ZRI6 C15orf39 Q6ZRI6.S586.p_C15orf39 Q6ZRI6_S586s _1_1_586_586 Q6ZRI6 Q6ZRI6|Q6ZRI6-2 Uncharacterized protein C15orf39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5601.5601.3 13.48 13.48 6.114 2 1 1 0 522.6284 1485.9041 S586s Hydrogen 580 (R) KPTAEAsPVK (A) KPT(0.0)AEAS(0.99)PVK K:TMT10-Lys-Only,s:Phosphorylated S C15orf39 112154.2 4 3 2185.1 94.11 HUMAN 1 -23.697 -38.115 RKPVKSLSLPGLRAH-p Q6ZW13;S114-p RKPVKSLSLPGLRAH 0.403134583733992 0.00267960937510165 -0.132666666666667 0.666666666666667 7.28493654776734 39.0720413562175 -0.132666666666667 0.666666666666667 0.186855697745212 0.000123821443985605 -1.51080342982612 9.7217107109126 Q6ZW13 C16orf86 Q6ZW13.S114.p_C16orf86 Q6ZW13_S114s _1_1_114_114 Q6ZW13 Q6ZW13 Uncharacterized protein C16orf86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22830.22830.2 8.29 8.29 2.176 2 1 1 0 576.3229 1071.6724 S114s TMT10 112 (K) SLsLPGLR (A) S(0.0)LS(0.99)LPGLR s:Phosphorylated S C16orf86 33738.4 1 1 5036.1 23.67 HUMAN 1 -7.2849 39.072 RKPWTSLSSESVSCP-p Q6DT37;S1514-p RKPWTSLSSESVSCP 0.252651211577592 0.535008821576608 0.438666666666667 -0.065 11.3936361442591 3.6546940143058 0.438666666666667 -0.065 0.0725498277356723 0.431052927118196 2.22522047595433 -0.850385283891433 Q6DT37 CDC42BPG Q6DT37.S1514.p_CDC42BPG Q6DT37_S1514s _1_1_1514_1514 Q6DT37 Q6DT37 Serine/threonine-protein kinase MRCK gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23645.23645.4 18.3 14.35 1.117 11 1 1 0 1007.7552 3948.0359 S1514s TMT10 1508 (R) KPWTSLsSESVSCPQGSLSPATSLMQVSERPR (S) KPWT(0.0)S(0.0)LS(0.99)S(0.0)ES(0.0)VS(0.0)CPQGS(0.0)LS(0.0)PAT(0.0)S(0.0)LMQVS(0.0)ERPR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CDC42BPG 173882.5 1 8 997.1 190.4 HUMAN 1 11.3936 -3.6547 RKQAREESEESEAEP-p Q9BW71;S196-p RKQAREESEESEAEP 0.290027496028783 0.703953959582358 0.223 -0.048 10.135090293428 2.09490319193384 0.223 -0.048 0.0969373115018973 0.617319052320852 2.0051903427941 -0.529655362225667 Q9BW71 HIRIP3 Q9BW71.S196.p_HIRIP3 Q9BW71_S196sS199s_2_2_196_199 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5049.5049.2 16.32 16.32 99 2 2 2 0 1008.883 1873.8522 Q191q S196s S199s Hydrogen 191 (K) qAREEsEEsEAEPVQR (T) Q(1.0)AREES(1.0)EES(1.0)EAEPVQR q:Pyroglutamic acid,s:Phosphorylated S HIRIP3 62298.3 10 22 178.1 481.23 HUMAN 1 10.1351 -2.0949 RKQDNVLSNVLSGLI-p Q9NXZ1;S458-p RKQDNVLSNVLSGLI 0.0887698163036001 0.105047850755091 -0.368666666666667 -0.553666666666667 22.4049756917164 12.9279898734494 -0.368666666666667 -0.553666666666667 0.00574781035994695 0.0509566668775789 -4.41515640335955 -2.49673834681975 Q9NXZ1 SAGE1 Q9NXZ1.S458.p_SAGE1 Q9NXZ1_S458s_1_1_458_458 Q9NXZ1 Q9NXZ1 Sarcoma antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12960.12960.4 7.31 7.31 1.162 5 1 1 0 739.6125 2874.5015 Q453q N455n S458s N459n M467m TMT10 453 (K) qDnVLsnVLSGLINmAGASIPAMSSR (D) Q(1.0)DN(0.99)VLS(0.99)N(0.99)VLS(0.0)GLIN(0.0)M(0.99)AGAS(0.0)IPAM(0.0)S(0.0)S(0.0)R q:Pyroglutamic acid,n:Deamidated,s:Phosphorylated S,m:Oxidized methionine SAGE1 99679.4 1 2 5694.1 17.07 HUMAN 1 -22.405 -12.928 RKQEEDDSLSDAGTY-p J3KQR7;S564-p RKQEEDDSLSDAGTY 0.691290202121515 0.358330436787067 -0.0883333333333333 0.094 3.00730048054823 5.91327734447926 -0.0883333333333333 0.0940000000000001 0.500345446725267 0.256254951340004 -0.721894718636754 1.26880147149838 J3KQR7 NotFound J3KQR7.S564.p_NotFound J3KQR7_S564sS566sT570t_3_3_564_570 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18595.18595.4 16.33 16.33 2.794 7 3 3 0 1022.1928 3845.8453 S564s S566s T570t Hydrogen 558 (R) KQEEDDsLsDAGtYTIETEAQDTEVEEARK (M) KQEEDDS(0.99)LS(0.99)DAGT(0.99)Y(0.0)T(0.0)IET(0.0)EAQDT(0.0)EVEEARK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T CEP170B 172326.6 2 41 51.1 746.11 HUMAN 1 -3.0073 5.9133 RKQHYLSSEDEPDDN-p Q8NFC6;S2780-p RKQHYLSSEDEPDDN 0.451712086772319 0.857382052214102 0.171333333333333 0.0226666666666667 6.37334902307071 0.942159114017026 0.171333333333333 0.0226666666666667 0.230496904693529 0.804978143296691 1.3508108304408 0.25928070742671 Q8NFC6 BOD1L1 Q8NFC6.S2780.p_BOD1L1 Q8NFC6_S2779sS2780s_2_2_2779_2780 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.16921.17134.2 21.09 21.09 5.566 4 2 2 0 1237.4525 2331.0008 Q2775q S2779s S2780s Hydrogen 2775 (K) qHYLssEDEPDDNPDVLDSR (I) Q(1.0)HY(0.0)LS(0.99)S(0.99)EDEPDDNPDVLDS(0.0)R q:Pyroglutamic acid,s:Phosphorylated S BOD1L1 332628.7 11 29 97.1 603.4 HUMAN 1 6.3733 0.9422 RKQIHCLSEDELSSS-p P51957;S677-p RKQIHCLSEDELSSS 0.191015759076221 0.0270837062306863 -0.246666666666667 -0.296666666666667 14.0555442074256 21.2677617138843 -0.246666666666667 -0.296666666666667 0.0393047989610482 0.00746833565627064 -2.7031222083392 -4.1522598161886 P51957 NEK4 P51957.S677.p_NEK4 P51957_S677s _1_1_677_677 P51957 P51957|P51957-2|P51957-3 Serine/threonine-protein kinase Nek4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12971.12971.5 23.22 18.17 8.773 10 1 1 0 832.2091 4077.0376 S677s TMT10 671 (R) KQIHCLsEDELSSSTSSTDKSDGDYGEGK (G) KQIHCLS(0.99)EDELS(0.0)S(0.0)S(0.0)T(0.0)S(0.0)S(0.0)T(0.0)DKS(0.0)DGDY(0.0)GEGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NEK4 95394.3 5 8 1066.1 181.01 HUMAN 1 -14.0555 -21.2678 RKQKKRQSVSGLHRY-p Q8N1G4;S431-p RKQKKRQSVSGLHRY 0.090424384916148 0.003348748305798 -0.594333333333333 -0.855333333333333 22.2065588828774 37.0325911259059 -0.594333333333334 -0.855333333333333 0.00601650264151634 0.000198034514234423 -4.36932454569569 -8.8734859094124 Q8N1G4 LRRC47 Q8N1G4.S431.p_LRRC47 Q8N1G4_S431s _1_1_431_431 Q8N1G4 Q8N1G4 Leucine-rich repeat-containing protein 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3766.3766.4 9.35 9.35 2.223 2 1 1 0 427.246 1625.9964 S431s TMT10 428 (K) KRQsVSGLHR (Y) KRQS(0.99)VS(0.0)GLHR K:TMT10,s:Phosphorylated S LRRC47 64042.3 2 3 814.1 220.85 HUMAN 1 -22.2066 -37.0326 RKQKLADSLRLQQLF-p A0A0D9SGF6;S783-p RKQKLADSLRLQQLF 0.110073096853557 0.0136973443304448 -0.362666666666667 0.479 20.0510270646264 25.8893088710291 -0.362666666666667 0.479 0.00988319339011559 0.00257673118106461 -3.88990989085117 5.26571619652765 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.S783.p_SPTAN1 A0A0D9SGF6_S783s _1_1_783_783 A0A0D9SGF6 A0A0D9SGF6|Q13813-2|A0A0D9SF54|Q13813-3 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26083.26083.3 8.6 8.6 99 1 1 1 0 590.3279 1689.0009 S783s TMT10 780 (K) LADsLRLQQLFR (D) LADS(1.0)LRLQQLFR s:Phosphorylated S SPTAN1 288398.5 1 2 263.1 396.39 HUMAN 1 -20.051 25.8893 RKQKQRLTPRPSPSP-p Q7KZ85;T1697-p RKQKQRLTPRPSPSP 0.760086950779645 0.797859497876107 0.0566666666666666 0.0253333333333333 2.28480024920739 1.37157166138347 0.0566666666666667 0.0253333333333333 0.590908143367847 0.729193575798293 0.570988505946218 0.364612772721991 Q7KZ85 SUPT6H Q7KZ85.T1697.p_SUPT6H Q7KZ85_T1697t _1_1_1697_1697 Q7KZ85 Q7KZ85|Q7KZ85-3|Q7KZ85-2 Transcription elongation factor SPT6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28130.28130.4 15.03 15.03 1.218 7 1 1 0 980.4817 3838.9339 T1697t TMT10 1694 (K) QRLtPRPSPSPMIESTPMSIAGDATPLLDEMDR (-) QRLT(0.99)PRPS(0.0)PS(0.0)PMIES(0.0)T(0.0)PMS(0.0)IAGDAT(0.0)PLLDEMDR t:Phosphorylated T SUPT6H 200324.3 5 12 279.1 388.92 HUMAN 1 2.2848 1.3716 RKQSRTGSIVLPYIM-p Q9H7D0;S1656-p RKQSRTGSIVLPYIM 0.108078410418423 0.0324563954685826 -0.344 -0.287 20.3341279813341 20.0883517854718 -0.344 -0.287 0.0092594928755297 0.00979861787510007 -3.95102759180946 -3.89427272002781 Q9H7D0 DOCK5 Q9H7D0.S1656.p_DOCK5 Q9H7D0_S1656s _1_1_1656_1656 Q9H7D0 Q9H7D0 Dedicator of cytokinesis protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33380.33380.2 11.32 11.32 1.804 6 1 1 0 974.0141 1867.056 S1656s TMT10 1654 (R) TGsIVLPYIMSSTLR (R) T(0.0)GS(0.99)IVLPY(0.0)IMS(0.0)S(0.0)T(0.0)LR s:Phosphorylated S DOCK5 216331.8 4 5 828.1 217.17 HUMAN 1 -20.3341 -20.0884 RKRARGISPIVFDRS-p J3QR07;S308-p RKRARGISPIVFDRS 0.391150856817222 0.0705656450953409 0.120333333333333 0.211333333333333 7.52980168716505 15.3104486585598 0.120333333333333 0.211333333333333 0.176611846549696 0.0294411746881618 1.55346993750749 2.93491744267372 J3QR07 YTHDC1 J3QR07.S308.p_YTHDC1 J3QR07_S308s _1_1_308_308 J3QR07 J3QR07|Q96MU7|Q96MU7-2 YTH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22204.22410.2 13.88 5.67 99 1 1 1 0 656.8465 1232.72 S308s TMT10 306 (R) GIsPIVFDR (S) GIS(1.0)PIVFDR s:Phosphorylated S YTHDC1 85871.1 4 9 702.1 239.92 HUMAN 1 7.5298 15.3104 RKRGHKGSFKDDPQL-p Q5VV41;S208-p RKRGHKGSFKDDPQL 0.620504869032167 0.348052816425527 -0.088 -0.115 3.85229580648247 6.07569984045756 -0.088 -0.115 0.411879729976745 0.246848229119973 -0.888788419623703 -1.29772529866581 Q5VV41 ARHGEF16 Q5VV41.S208.p_ARHGEF16 Q5VV41_S208s _1_1_208_208 Q5VV41 Q5VV41 Rho guanine nucleotide exchange factor 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12932.12932.4 16.57 13.8 6.159 2 1 1 0 704.1051 2733.436 S208s Hydrogen 204 (R) GHKGsFKDDPQLYQEIQER (G) GHKGS(0.99)FKDDPQLY(0.0)QEIQER K:TMT10-Lys-Only,s:Phosphorylated S ARHGEF16 80388.8 6 8 597.1 263.65 HUMAN 1 -3.8523 -6.0757 RKRGHTASESDEQQW-p Q9NTI5;S1257-p RKRGHTASESDEQQW 0.0188125555564293 0.00260171574325973 -1.185 -0.912333333333333 40.5326367636107 39.3771864780067 -1.185 -0.912333333333333 8.84578386266858e-05 0.000115420075005821 -10.3980032185817 -9.85472432407126 Q9NTI5 PDS5B Q9NTI5.S1257.p_PDS5B Q9NTI5_S1257s _1_1_1257_1257 Q9NTI5 Q9NTI5|Q9NTI5-2|Q9NTI5-5 Sister chromatid cohesion protein PDS5 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6658.6658.3 8.81 8.81 1.172 3 1 1 0 775.0101 2243.0526 S1257s Hydrogen 1253 (R) GHTAsESDEQQWPEEKR (L) GHT(0.0)AS(0.99)ES(0.0)DEQQWPEEKR K:TMT10-Lys-Only,s:Phosphorylated S PDS5B 165919.5 12 10 100.1 597.99 HUMAN 1 -40.5326 -39.3772 RKRGRSGSAAQAEGL-p Q92685;S13-p RKRGRSGSAAQAEGL 0.293180007917268 0.0277035326877483 0.292666666666667 -0.974666666666667 10.0549236303489 21.1173699554109 0.292666666666667 -0.974666666666667 0.0987432999368496 0.00773148654559241 1.9912542133298 -4.11882784474758 Q92685 ALG3 Q92685.S13.p_ALG3 Q92685_S13s _1_1_13_13 Q92685 Q92685|F8WE30|F8WF93 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10849.10849.2 16.69 16.69 2.234 2 1 1 0 858.9234 1636.8729 S13s TMT10 11 (R) SGsAAQAEGLCK (Q) S(0.0)GS(0.99)AAQAEGLCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ALG3 50867.2 2 2 4360.1 32.77 HUMAN 1 10.0549 -21.1174 RKRHCAPSPDRSPEL-p Q96T37;S670-p RKRHCAPSPDRSPEL 0.212494308183896 0.0165705183711879 0.259333333333333 0.360333333333333 12.9825402807027 24.5901905636726 0.259333333333333 0.360333333333333 0.0503206186698799 0.00347520912270799 2.50792125033371 4.9346999112506 Q96T37 RBM15 Q96T37.S670.p_RBM15 Q96T37_S670s _1_1_670_670 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4862.4862.3 16 16 3.759 5 1 1 0 697.9872 2011.9817 S670s TMT10 666 (R) HCAPsPDRSPELSSSR (D) HCAPS(0.99)PDRS(0.0)PELS(0.0)S(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S RBM15 107414.9 3 20 55.1 724.11 HUMAN 1 12.9825 24.5902 RKRHREDSDVEMVED-p P40692;S477-p RKRHREDSDVEMVED 0.483726315617236 0.156795614180223 -0.0933333333333333 -0.143 5.80928225069903 10.5807017741663 -0.0933333333333334 -0.143 0.262465227827074 0.0874842398482772 -1.2505132807706 -2.0819063883951 P40692 MLH1 P40692.S477.p_MLH1 P40692_S477s _1_1_477_477 P40692 P40692|P40692-3|P40692-2 DNA mismatch repair protein Mlh1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7141.7141.4 20.12 20.12 20.116 2 1 1 0 564.75 2176.0138 S477s Hydrogen 473 (R) HREDsDVEMVEDDSRK (E) HREDS(0.99)DVEMVEDDS(0.0)RK K:TMT10-Lys-Only,s:Phosphorylated S MLH1 85227 10 3 2162.1 94.86 HUMAN 1 -5.8093 -10.5807 RKRKAPASPGAGSDA-p Q5T6F0;S15-p RKRKAPASPGAGSDA 0.25414491835742 0.0108456278071732 0.218666666666667 -0.406666666666667 11.3279958585839 27.5330424348524 0.218666666666667 -0.406666666666667 0.0736546913838301 0.00176480106230168 2.21367436106004 -5.70719163431624 Q5T6F0 DCAF12 Q5T6F0.S15.p_DCAF12 Q5T6F0_S15s _1_1_15_15 Q5T6F0 Q5T6F0 DDB1- and CUL4-associated factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13229.13229.4 18.89 18.89 2.269 3 1 1 0 778.8871 3032.5491 S15s TMT10 12 (K) APAsPGAGSDAQGPQFGWDHSLHKR (K) APAS(0.99)PGAGS(0.0)DAQGPQFGWDHS(0.0)LHKR K:TMT10,s:Phosphorylated S DCAF12 51086.9 4 1 3365.1 52.8 HUMAN 1 11.328 -27.533 RKRKHSPSPPPPTPT-p Q92922;S330-p RKRKHSPSPPPPTPT 0.419598745385739 0.0740755265792305 0.169666666666667 0.229666666666667 6.96409609474745 15.0016763688766 0.169666666666667 0.229666666666667 0.201182587972344 0.0316105726223909 1.45472694930273 2.87688803598761 Q92922 SMARCC1 Q92922.S330.p_SMARCC1 Q92922_S330s _1_1_330_330 Q92922 Q92922 SWI/SNF complex subunit SMARCC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.3690.3690.4 12.29 12.29 1.374 5 1 1 0 578.0611 2229.2504 S330s TMT10 325 (K) RKHSPsPPPPTPTESR (K) RKHS(0.0)PS(0.99)PPPPT(0.0)PT(0.0)ES(0.0)R K:TMT10,s:Phosphorylated S SMARCC1 123378.3 3 2 2356.1 86.86 HUMAN 1 6.9641 15.0017 RKRKKRDSEEEFGSE-p Q12873-3;S132-p RKRKKRDSEEEFGSE 0.149285094777406 0.343881984312331 0.255 -0.158 16.6446093555755 6.14152199611485 0.255 -0.158 0.0216540464697002 0.24313517863013 3.19296157198314 -1.30941718650441 Q12873 CHD3 Q12873.3.S132.p_CHD3 Q12873-3_S132s _1_1_132_132 Q12873-3 Q12873-3|Q12873-2 Isoform 3 of Chromodomain-helicase-DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5517.5517.5 10.98 10.98 2.144 3 1 1 0 586.2955 2847.484 S132s TMT10 128 (R) KKRDsEEEFGSERDEYR (E) KKRDS(0.99)EEEFGS(0.0)ERDEY(0.0)R K:TMT10,s:Phosphorylated S CHD3 234573.2 3 40 49.3 753.68 HUMAN 1 16.6446 -6.1415 RKRKREDSAPPSSVA-p Q9BZE4;S558-p RKRKREDSAPPSSVA 0.375429973739957 0.272327121176551 0.139666666666667 -0.148 7.87020021868773 7.43974622698765 0.139666666666667 -0.148 0.163297666257647 0.180312310038658 1.6126354784521 -1.53733804100037 Q9BZE4 GTPBP4 Q9BZE4.S558.p_GTPBP4 Q9BZE4_S558s _1_1_558_558 Q9BZE4 Q9BZE4|Q9BZE4-2|Q9BZE4-3 Nucleolar GTP-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.3834.3834.4 11.62 11.62 5.144 3 1 1 0 524.2852 2014.1558 S558s TMT10 553 (K) RKREDsAPPSSVAR (S) RKREDS(0.99)APPS(0.0)S(0.0)VAR K:TMT10,s:Phosphorylated S GTPBP4 74362.6 4 2 3169.1 58.8 HUMAN 1 7.8702 -7.4397 RKRKYNWSAKAKRRN-p P61927;S50-p RKRKYNWSAKAKRRN 0.161855009563346 0.561028527411634 0.377 -0.0813333333333333 15.8328000117989 3.38366096762388 0.377 -0.0813333333333333 0.026104777674248 0.458811086277666 3.03615155659902 -0.797196384960632 P61927 RPL37 P61927.S50.p_RPL37 P61927_S50s _1_1_50_50 P61927 P61927|D6RG19 60S ribosomal protein L37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12745.12745.3 8.38 8.38 8.384 2 1 1 0 555.3108 1583.9513 S50s TMT10 46 (R) KYNWsAK (A) KY(0.0)NWS(0.99)AK K:TMT10,s:Phosphorylated S RPL37 11305.9 1 1 4893.1 25.38 HUMAN 1 15.8328 -3.3837 RKRRGRKSANNTPEN-p Q9NRL2;S1363-p RKRRGRKSANNTPEN 0.147571881565505 0.00849347474824415 0.553666666666667 -0.449 16.8659020162588 29.3936623420069 0.553666666666667 -0.449 0.0205783144090326 0.00114983034483492 3.23626949706191 -6.24011560825016 Q9NRL2 BAZ1A Q9NRL2.S1363.p_BAZ1A Q9NRL2_S1363s _1_1_1363_1363 Q9NRL2 Q9NRL2|Q9NRL2-2 Bromodomain adjacent to zinc finger domain protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16664.16664.3 7.27 7.27 3.152 3 1 1 0 705.6553 2034.9831 S1363s TMT10 1363 (K) sANNTPENSPNFPNFR (V) S(0.99)ANNT(0.0)PENS(0.0)PNFPNFR s:Phosphorylated S BAZ1A 180353.8 1 8 567.1 270.71 HUMAN 1 16.8659 -29.3937 RKRRKEKSLGDEEEP-p Q5T1R4;S720-p RKRRKEKSLGDEEEP 0.08581207963261 0.664897471138696 -0.364 0.057 22.817004114928 2.42598519935441 -0.364 0.057 0.00522756676856446 0.57200717979854 -4.51130001826219 0.601125797877163 Q5T1R4 HIVEP3 Q5T1R4.S720.p_HIVEP3 Q5T1R4_S720s _1_1_720_720 Q5T1R4 Q5T1R4|Q5T1R4-2 Transcription factor HIVEP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18788.18788.3 19.23 19.23 19.229 3 1 1 0 725.3505 2094.0643 S720s TMT10 720 (K) sLGDEEEPPAFESTK (S) S(0.99)LGDEEEPPAFES(0.0)T(0.0)K K:TMT10,s:Phosphorylated S HIVEP3 261285.6 1 23 465.1 303.46 HUMAN 1 -22.817 2.426 RKRRKMKSVGDDEEL-p P15822;S1036-p RKRRKMKSVGDDEEL 0.128775556701859 0.341396096569795 -0.322333333333333 -0.0926666666666667 18.4412002549156 6.18128126045986 -0.322333333333333 -0.0926666666666667 0.0143179214175835 0.240919456054518 -3.5521125612915 -1.31647166535426 P15822 HIVEP1 P15822.S1036.p_HIVEP1 P15822_S1036s _1_1_1036_1036 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12901.12901.3 17.38 17.38 7.548 4 1 1 0 982.8155 2866.4707 S1036s TMT10 1034 (K) MKsVGDDEELQQNESGTSPK (S) MKS(0.99)VGDDEELQQNES(0.0)GT(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S HIVEP1 299483.8 1 18 82.1 631.69 HUMAN 1 -18.4412 -6.1813 RKRRKSVTPDPKEKQ-p O75618-2;T184-p RKRRKSVTPDPKEKQ 0.922642065307985 0.3029587065791 -0.022 0.102666666666667 0.68560410405765 6.84799804197139 -0.022 0.102666666666667 0.853964052671624 0.206633244917594 -0.193043097728943 1.43399136604225 O75618 DEDD O75618.2.T184.p_DEDD O75618-2_T184t _1_1_184_184 O75618-2 O75618-2|B1AQP5 Isoform 2 of Death effector domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7826.7826.3 9.24 9.24 2.971 2 1 1 0 546.9857 1558.9772 T184t TMT10 181 (R) KSVtPDPK (E) KS(0.0)VT(0.99)PDPK K:TMT10,t:Phosphorylated T DEDD 40874 3 2 4377.1 32.42 HUMAN 1 -0.6856 6.848 RKRRRPVSPERYSYG-p Q8WXF8;S111-p RKRRRPVSPERYSYG 0.070052967559613 0.754131066918749 0.470666666666667 0.087 24.9043183173061 1.69338060828649 0.470666666666667 0.087 0.00323272058187462 0.677114227340797 5.01958429555817 0.439726598178873 Q8WXF8 DEDD2 Q8WXF8.S111.p_DEDD2 Q8WXF8_S111s _1_1_111_111 Q8WXF8 Q8WXF8|Q8WXF8-2|M0QXK7 DNA-binding death effector domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7829.7829.3 10.9 10.9 9.858 9 1 1 0 809.4092 2346.2454 S111s TMT10 108 (R) RPVsPERYSYGTSSSSK (R) RPVS(0.99)PERY(0.0)S(0.0)Y(0.0)GT(0.0)S(0.0)S(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S DEDD2 36634.7 1 1 6565.1 10.9 HUMAN 1 24.9043 1.6934 RKRRRTNSSSSSPVV-p Q7Z589-4;S224-p RKRRRTNSSSSSPVV 0.313661999472413 0.0036981515606232 -0.294666666666667 -0.636333333333333 9.4177432840275 36.0889407707108 -0.294666666666667 -0.636333333333333 0.114347236075974 0.000246096775251965 -1.88070439316712 -8.50386203929874 Q7Z589 C11orf30 Q7Z589.4.S224.p_C11orf30 Q7Z589-4_S224s _1_1_224_224 Q7Z589-4 Q7Z589-7|Q7Z589-4|Q7Z589-5|Q7Z589-6|E9PMC9|Q7Z589-2 Isoform 4 of BRCA2-interacting transcriptional repressor EMSY HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15080.15080.2 13.72 8.32 1.112 6 1 1 0 872.4673 1663.9631 S224s TMT10 222 (R) TNsSSSSPVVLK (E) T(0.0)NS(0.99)S(0.0)S(0.0)S(0.0)S(0.0)PVVLK K:TMT10,s:Phosphorylated S EMSY 142030.9 11 3 879.1 207.7 HUMAN 1 -9.4177 -36.0889 RKRRSSLSPPSSAYE-p Q9BYW2;S2082-p RKRRSSLSPPSSAYE 0.232352790917739 0.291062510566789 0.247 0.124666666666667 12.1910957921675 7.07448931212469 0.247 0.124666666666667 0.0603796263016512 0.19613317953712 2.36627619731417 1.47363449313119 Q9BYW2 SETD2 Q9BYW2.S2082.p_SETD2 Q9BYW2_S2082s _1_1_2082_2082 Q9BYW2 Q9BYW2 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11176.11176.2 9.99 3.01 1.841 6 1 1 0 795.3752 1509.7747 S2082s TMT10 2079 (R) SSLsPPSSAYER (G) S(0.0)S(0.0)LS(0.99)PPS(0.0)S(0.0)AY(0.0)ER s:Phosphorylated S SETD2 290615.4 1 27 58.1 711.11 HUMAN 1 12.1911 7.0745 RKRRVALSPVTENST-p P10244;S421-p RKRRVALSPVTENST 0.523929192761669 0.00109454193985794 -0.0863333333333333 -1.34133333333333 5.19284325993633 49.9602610868971 -0.0863333333333333 -1.34133333333333 0.302493240245013 1.00919221416051e-05 -1.13928307648908 -15.6652460075025 P10244 MYBL2 P10244.S421.p_MYBL2 P10244_S421s _1_1_421_421 P10244 P10244|P10244-2 Myb-related protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31979.31979.3 23.65 18.31 1.155 9 1 1 0 1069.2073 3125.6441 S421s TMT10 418 (R) VALsPVTENSTSLSFLDSCNSLTPK (S) VALS(0.99)PVT(0.0)ENS(0.0)T(0.0)S(0.0)LS(0.0)FLDS(0.0)CNS(0.0)LT(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MYBL2 79390.3 4 6 752.1 231.53 HUMAN 1 -5.1928 -49.9603 RKRSRKESYSVYVYK-p U3KQK0;S37-p RKRSRKESYSVYVYK 0.0217780195589434 0.00107644966075265 -0.838666666666667 -1.14633333333333 38.552508109746 50.1028547858657 -0.838666666666667 -1.14633333333333 0.000139556217213602 9.76595056157468e-06 -9.51994262193734 -15.7622038407051 U3KQK0 NotFound U3KQK0.S37.p_NotFound U3KQK0_S37s _1_1_37_37 U3KQK0 U3KQK0|Q5QNW6-2|P57053|P62807|P58876|Q93079|O60814|Q99880|Q99879|Q99877 Histone H2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15376.15376.2 12.99 12.99 2.137 5 1 1 0 902.4696 1723.9671 S37s Hydrogen 35 (R) KEsYSVYVYK (V) KES(0.99)Y(0.0)S(0.0)VY(0.0)VY(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S HIST1H2BN 18803.6 7 4 2194.1 93.83 HUMAN 1 -38.5525 -50.1029 RKRSVAVSDEEEVEE-p Q9Y6X9;S743-p RKRSVAVSDEEEVEE 0.319991630816832 0.916231237903057 0.177666666666667 0.012 9.26261288914253 0.53448582355141 0.177666666666667 0.012 0.118505555686992 0.884201846757418 1.85383241151773 0.152639815804776 Q9Y6X9 MORC2 Q9Y6X9.S743.p_MORC2 Q9Y6X9_S743s _1_1_743_743 Q9Y6X9 Q9Y6X9|Q9Y6X9-2 MORC family CW-type zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14354.14354.4 24.4 24.4 4.677 2 1 1 0 658.0738 2549.3095 S743s TMT10 739 (R) SVAVsDEEEVEEEAERRK (E) S(0.0)VAVS(0.99)DEEEVEEEAERRK K:TMT10,s:Phosphorylated S MORC2 118619.8 14 9 309.1 372.4 HUMAN 1 9.2626 0.5345 RKRVSASSPTTKDKE-p Q9BVI0;S519-p RKRVSASSPTTKDKE 0.184102689727552 0.128782702969415 -0.432333333333333 -0.175333333333333 14.4483482824118 11.736803977628 -0.432333333333333 -0.175333333333333 0.0359058466525065 0.0670377766539529 -2.77561443756016 -2.28462547017886 Q9BVI0 PHF20 Q9BVI0.S519.p_PHF20 Q9BVI0_S519s _1_1_519_519 Q9BVI0 Q9BVI0 PHD finger protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5464.5464.3 9.27 9.27 1.501 5 1 1 0 524.6227 1491.8895 S519s TMT10 514 (K) RVSASsPTTK (D) RVS(0.0)AS(0.0)S(0.99)PT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S PHF20 116810 7 5 1726.1 119.34 HUMAN 1 -14.4483 -11.7368 RKSFDLGSPKPGDET-p O60229-6;S107-p RKSFDLGSPKPGDET 0.335167066678141 0.00538864127968498 -0.416333333333333 0.577 8.8554189320326 32.9323056652424 -0.416333333333333 0.577 0.130154175933648 0.000509060539551579 -1.78333549253673 7.36313402315186 O60229 KALRN O60229.6.S107.p_KALRN O60229-6_S107s _1_1_107_107 O60229-6 J3QSW6|O60229|O60229-4|O60229-6|O60229-5 Isoform 6 of Kalirin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9683.9890.3 7.6 7.6 4.395 2 1 1 0 582.664 1666.0143 S107s TMT10 101 (R) KSFDLGsPK (P) KS(0.0)FDLGS(0.99)PK K:TMT10,s:Phosphorylated S KALRN 143044.5 1 2 450.2 308.79 HUMAN 1 -8.8554 32.9323 RKSLVMHTPPVLKKI-p P46013;T543-p RKSLVMHTPPVLKKI 0.843014095868429 0.00525260486566216 0.0306666666666667 -0.511666666666667 1.43519110599144 33.1537955184903 0.0306666666666667 -0.511666666666667 0.718589537028328 0.000483749409784442 0.379740454366663 -7.43864759228555 P46013 MKI67 P46013.T543.p_MKI67 P46013_T543t _1_1_543_543 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18687.18687.4 14.49 14.49 5.245 2 1 1 0 530.069 2037.2862 T543t TMT10 538 (K) SLVMHtPPVLKK (I) S(0.0)LVMHT(0.99)PPVLKK K:TMT10,t:Phosphorylated T MKI67 360912.4 5 11 5.1 1918.46 HUMAN 1 1.4352 -33.1538 RKSNFSNSADDIKSK-p P45973;S97-p RKSNFSNSADDIKSK 0.0431670381948327 0.00413791477536262 -0.541 -0.601666666666667 30.2970545330166 35.0927325866087 -0.541 -0.601666666666667 0.000933887466131357 0.000309547101190461 -6.52301465675094 -8.12841445917985 P45973 CBX5 P45973.S97.p_CBX5 P45973_S97s _1_1_97_97 P45973 P45973 Chromobox protein homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12665.12665.2 15.56 11.49 2.268 3 1 1 0 868.4186 1655.8641 S97s TMT10 92 (K) SNFSNsADDIK (S) S(0.0)NFS(0.0)NS(0.99)ADDIK K:TMT10,s:Phosphorylated S CBX5 22395.7 2 3 1801.1 114.16 HUMAN 1 -30.2971 -35.0927 RKSNIRKSVQIAYHR-p P55201-2;S1193-p RKSNIRKSVQIAYHR 0.785321801685938 0.910988819115982 0.064 -0.0126666666666666 2.02208372377138 0.566528956882582 0.064 -0.0126666666666666 0.627757091750801 0.877702033016526 0.51368710355154 -0.16129347900526 P55201 BRPF1 P55201.2.S1193.p_BRPF1 P55201-2_S1193s _1_1_1193_1193 P55201-2 P55201-2|P55201-3|P55201-4 Isoform 2 of Peregrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8372.8372.3 10.43 10.43 10.428 2 1 1 0 428.2221 1202.6843 S1193s TMT10 1193 (K) sVQIAYHR (A) S(0.99)VQIAY(0.0)HR s:Phosphorylated S BRPF1 139837.6 1 11 723.1 237.03 HUMAN 1 2.0221 -0.5665 RKSQGAGSGQDEADV-p Q9UHG0;S438-p RKSQGAGSGQDEADV 0.622457643811592 0.0067068015121567 0.0723333333333333 0.527333333333333 3.82587272454561 31.2205297439086 0.0723333333333333 0.527333333333334 0.414393302402699 0.00075500012861059 0.883695197228802 6.80087942914488 Q9UHG0 DCDC2 Q9UHG0.S438.p_DCDC2 Q9UHG0_S438s _1_1_438_438 Q9UHG0 Q9UHG0|Q9UHG0-2 Doublecortin domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9063.9063.4 15.51 10.05 2.072 2 1 1 0 765.381 2978.5332 S438s TMT10 433 (K) SQGAGsGQDEADVDPQRPPRPEVK (I) S(0.0)QGAGS(0.99)GQDEADVDPQRPPRPEVK K:TMT10,s:Phosphorylated S DCDC2 52889.9 2 5 1697.1 120.47 HUMAN 1 3.8259 31.2205 RKSRRSRSESETSTM-p Q5BIX2;S145-p RKSRRSRSESETSTM 0.104209357384164 0.0914355921751823 -0.299333333333333 -0.38 20.7213605382084 13.7402364363919 -0.299333333333333 -0.38 0.00846962040118819 0.0422645604182342 -4.03550096285174 -2.6437977036263 Q5BIX2 C18orf25 Q5BIX2.S145.p_C18orf25 Q5BIX2_S145s _1_1_145_145 Q5BIX2 Q5BIX2|Q96B23|Q96B23-2|A0A087WVF1 Chromosome 18 open reading frame 25, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7223.7223.3 11.55 5.59 9.083 6 1 1 0 760.7324 2200.221 S145s TMT10 143 (R) SRsESETSTMAAKK (N) S(0.0)RS(0.99)ES(0.0)ET(0.0)S(0.0)T(0.0)MAAKK K:TMT10,s:Phosphorylated S C18orf25 43622.5 16 2 1972.1 104.68 HUMAN 1 -20.7214 -13.7402 RKSRVSVSPGRTSGK-p A9Z1X7;S426-p RKSRVSVSPGRTSGK 0.18516399568195 0.488157183212655 0.268666666666667 0.148333333333333 14.4063086160596 4.16128019799539 0.268666666666667 0.148333333333333 0.0362551025915541 0.383594154289457 2.76782763187811 0.947670316800788 A9Z1X7 NotFound A9Z1X7.S426.p_NotFound A9Z1X7_S426s _1_1_426_426 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7999.7999.3 10.28 7.02 1.794 4 1 1 0 538.299 1532.9161 S426s TMT10 423 (R) VSVsPGRTSGK (V) VS(0.0)VS(0.99)PGRT(0.0)S(0.0)GK K:TMT10,s:Phosphorylated S SRRM1 103445.7 12 12 8.1 1346.57 HUMAN 1 14.4063 4.1613 RKSSLVTSKLAGQSF-p Q5T5H1;S129-p RKSSLVTSKLAGQSF 0.624769574961845 0.0979404308740438 -0.0753333333333333 -0.245333333333333 3.79649127542749 13.3397502758423 -0.0753333333333333 -0.245333333333333 0.417206314039102 0.0463473569215844 -0.878023223829947 -2.57101722335925 Q5T5H1 NotFound Q5T5H1.S129.p_NotFound Q5T5H1_S129s _1_1_129_129 Q5T5H1 Q5T5H1|O43768-4 Alpha-endosulfine HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11216.11216.2 8.25 8.25 8.254 4 1 1 0 630.3527 1179.7349 S129s TMT10 124 (K) SSLVTsK (L) S(0.0)S(0.0)LVT(0.0)S(0.99)K K:TMT10,s:Phosphorylated S ENSA 21164.7 1 13 1520.1 134.39 HUMAN 1 -3.7965 -13.3398 RKSSSQPSPSDPKKK-p Q9H321;S27-p RKSSSQPSPSDPKKK 0.90552186362789 0.00586651472949607 0.0223333333333333 -0.593666666666667 0.846520113221862 32.252584898021 0.0223333333333333 -0.593666666666667 0.822901755254189 0.000595307714027227 0.234923769712183 -7.13540976597252 Q9H321 VCX3B Q9H321.S27.p_VCX3B Q9H321_S27s _1_1_27_27 Q9H321 Q9H321|Q9H321-2|B5MDK9|Q9H320|J3KNW2|Q9NNX9|E7EUP4|E7ESE9 Variable charge X-linked protein 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6807.6807.4 11.43 11.43 2.263 5 1 1 0 593.087 2289.3584 S27s TMT10 22 (K) SSSQPsPSDPKKK (T) S(0.0)S(0.0)S(0.0)QPS(0.99)PS(0.0)DPKKK K:TMT10,s:Phosphorylated S VCX3B 26877.4 3 1 4284.1 34.26 HUMAN 1 0.8465 -32.2526 RKSTKKRSESPPAEL-p Q14669-3;S352-p RKSTKKRSESPPAEL 0.415981113251715 0.242964992347711 0.179 -0.115666666666667 7.02948747107598 8.09508214385581 0.179 -0.115666666666667 0.19817608878241 0.155057145850936 1.46617385737434 -1.65112099424306 Q14669 TRIP12 Q14669.3.S352.p_TRIP12 Q14669-3_S352sS354s_2_2_352_354 Q14669-3 Q14669-3|Q14669-2|G5E9G6 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10872.10872.5 12.5 11.83 12.501 3 2 2 0 469.0491 2181.2868 S352s S354s TMT10 350 (K) KRsEsPPAELPSLRR (S) KRS(0.99)ES(0.99)PPAELPS(0.0)LRR K:TMT10,s:Phosphorylated S TRIP12 227456.1 2 21 234.1 420.47 HUMAN 1 7.0295 -8.0951 RKSVYRGSLTQRNPN-p Q9BV36;S574-p RKSVYRGSLTQRNPN 0.934979371920407 0.241218597261276 0.018 -0.145666666666667 0.572786106579953 8.13519952779922 0.018 -0.145666666666667 0.876438383841001 0.153631420886702 0.162992780799718 -1.65807135500538 Q9BV36 MLPH Q9BV36.S574.p_MLPH Q9BV36_S574s _1_1_574_574 Q9BV36 Q9BV36|Q9BV36-2|Q9BV36-3|Q9BV36-5 Melanophilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6739.6739.3 9.5 9.5 1.112 4 1 1 0 492.5906 1395.7906 S574s TMT10 569 (K) SVYRGsLTQR (N) S(0.0)VY(0.0)RGS(0.99)LT(0.0)QR s:Phosphorylated S MLPH 66632.6 3 10 496.1 293.1 HUMAN 1 0.5728 -8.1352 RKSYIVMSPESPVKC-p H7BY22;S191-p RKSYIVMSPESPVKC 0.530763566971729 0.00727421865613144 0.086 0.502666666666667 5.08991230708443 30.5888423061073 0.086 0.502666666666667 0.309748184306246 0.000873204106398256 1.12050976970058 6.60256318269959 H7BY22 ZBTB44 H7BY22.S191.p_ZBTB44 H7BY22_S191s _1_1_191_191 H7BY22 Q8NCP5|H7BY22|Q8NCP5-2|Q8NCP5-4|Q8NCP5-3 Zinc finger and BTB domain-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21352.21352.2 12.75 9.84 2.204 4 1 1 0 937.9875 1795.0076 S191s TMT10 186 (K) SYIVMsPESPVK (C) S(0.0)Y(0.0)IVMS(0.99)PES(0.0)PVK K:TMT10,s:Phosphorylated S ZBTB44 64850.4 5 2 3799.1 42.87 HUMAN 1 5.0899 30.5888 RKTAPTLSPEHWKAV-p Q96JM3;S405-p RKTAPTLSPEHWKAV 0.422807784151987 0.00363879152855353 -0.108333333333333 -0.721 6.88507448115209 36.2437896604833 -0.108333333333333 -0.721 0.204876691346949 0.000237476715669025 -1.44088073220238 -8.56356618621472 Q96JM3 CHAMP1 Q96JM3.S405.p_CHAMP1 Q96JM3_S405s _1_1_405_405 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15011.15011.3 15.99 15.99 3.297 3 1 1 0 721.4063 2082.2315 S405s TMT10 399 (R) KTAPTLsPEHWK (A) KT(0.0)APT(0.0)LS(0.99)PEHWK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 15 19 25.1 950.05 HUMAN 1 -6.8851 -36.2438 RKTASLNSPVSCKEK-p Q8IUY3;S27-p RKTASLNSPVSCKEK 0.82812019258662 0.00542252106697309 -0.0373333333333333 -0.651666666666667 1.57237686092778 32.8778529474281 -0.0373333333333334 -0.651666666666667 0.696245359987211 0.000515483424811137 -0.411871767799931 -7.34466868506146 Q8IUY3 GRAMD2 Q8IUY3.S27.p_GRAMD2 Q8IUY3_S27s _1_1_27_27 Q8IUY3 Q8IUY3|H3BTF7 GRAM domain-containing protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11459.11459.2 13.42 13.42 2.861 4 1 1 0 851.4366 1621.8984 S27s TMT10 22 (K) TASLNsPVSCK (E) T(0.0)AS(0.0)LNS(0.99)PVS(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GRAMD2A 40933.4 2 1 4155.1 36.55 HUMAN 1 -1.5724 -32.8779 RKTERKPSEEEYVIR-p Q15052;S640-p RKTERKPSEEEYVIR 0.218756095380882 0.00333693896053592 -0.187666666666667 0.931666666666667 12.7160017062044 37.0571120397884 -0.187666666666667 0.931666666666667 0.0535056727966389 0.000196919532483246 -2.46001566906685 8.88327749384058 Q15052 ARHGEF6 Q15052.S640.p_ARHGEF6 Q15052_S640s _1_1_640_640 Q15052 Q15052|Q15052-2 Rho guanine nucleotide exchange factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12353.12353.4 8.99 8.99 8.99 2 1 1 0 537.054 2065.2261 S640s TMT10 638 (R) KPsEEEYVIRK (S) KPS(0.99)EEEY(0.0)VIRK K:TMT10,s:Phosphorylated S ARHGEF6 88752.5 4 22 434.2 313.68 HUMAN 1 -12.716 37.0571 RKTESSLSLDIHSKS-p O43166;S1393-p RKTESSLSLDIHSKS 0.826766553707022 0.08037670191759 0.0353333333333333 -0.235333333333333 1.59404550588479 14.5270310948319 0.0353333333333333 -0.235333333333333 0.692780172204651 0.0352611839650065 0.416897894366888 -2.7884575044164 O43166 SIPA1L1 O43166.S1393.p_SIPA1L1 O43166_S1393s _1_1_1393_1393 O43166 O43166|O43166-2|O43166-3|F5GYF8 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13951.13951.3 15.49 7.72 2.508 5 1 1 0 738.0775 2132.253 S1393s TMT10 1387 (R) KTESSLsLDIHSK (S) KT(0.0)ES(0.0)S(0.0)LS(0.99)LDIHS(0.0)K K:TMT10,s:Phosphorylated S SIPA1L1 201223.1 5 19 46.1 777.88 HUMAN 1 1.594 -14.527 RKTRQDGSQEAPEAP-p Q14676;S1086-p RKTRQDGSQEAPEAP 0.450792703794699 0.00923137433812997 0.102 0.460666666666667 6.38854247609379 28.747645518619 0.102 0.460666666666667 0.229691938164368 0.00133424458264286 1.35349637180654 6.05089013162522 Q14676 MDC1 Q14676.S1086.p_MDC1 Q14676_S1086s _1_1_1086_1086 Q14676 Q14676|Q14676-2|Q14676-3 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19916.19916.4 25.09 25.09 11.248 3 1 1 0 847.1907 3305.7621 S1086s TMT10 1083 (R) QDGsQEAPEAPLSSELEPFHPKPK (I) QDGS(0.99)QEAPEAPLS(0.0)S(0.0)ELEPFHPKPK K:TMT10,s:Phosphorylated S MDC1 227803.2 14 29 6.1 1662.62 HUMAN 1 6.3885 28.7476 RKTSAVSSPLLDQQR-p Q5T200;S242-p RKTSAVSSPLLDQQR 0.36202743547635 0.274170718040952 0.142333333333333 -0.223333333333333 8.19623166785669 7.40362560160138 0.142333333333333 -0.223333333333333 0.151487512115104 0.181818235964151 1.66918545469109 -1.53104928092986 Q5T200 ZC3H13 Q5T200.S242.p_ZC3H13 Q5T200_S242s _1_1_242_242 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11914.11914.3 11.74 11.74 1.156 4 1 1 0 690.0451 1988.1541 S242s TMT10 236 (R) KTSAVSsPLLDQQR (N) KT(0.0)S(0.0)AVS(0.0)S(0.99)PLLDQQR K:TMT10,s:Phosphorylated S ZC3H13 197316.7 6 7 24.1 987.82 HUMAN 1 8.1962 -7.4036 RKTSGLGSPRAIKRG-p Q9ULM0;S522-p RKTSGLGSPRAIKRG 0.820904102287946 0.00534270105353013 0.0566666666666666 -0.624 1.64816540067842 32.9963572783435 0.0566666666666667 -0.624 0.684200614548417 0.000501607789619375 0.42939479043941 -7.38490455031873 Q9ULM0 PLEKHH1 Q9ULM0.S522.p_PLEKHH1 Q9ULM0_S522s _1_1_522_522 Q9ULM0 Q9ULM0|Q9ULM0-2 Pleckstrin homology domain-containing family H member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6498.6498.3 8.97 4.19 5.796 3 1 1 0 480.9377 1360.8313 S522s TMT10 516 (R) KTSGLGsPR (A) KT(0.0)S(0.0)GLGS(0.99)PR K:TMT10,s:Phosphorylated S PLEKHH1 152827.1 1 11 981.1 192.43 HUMAN 1 1.6482 -32.9964 RKTVQSNSPISALAP-p O95292;S206-p RKTVQSNSPISALAP 0.234058938491699 0.602169080354675 0.263 -0.0743333333333333 12.0903305781358 2.98707967065398 0.263 -0.0743333333333333 0.0617969359491442 0.502680493688228 2.34836700188734 -0.717686329599765 O95292 VAPB O95292.S206.p_VAPB O95292_S206s _1_1_206_206 O95292 O95292 Vesicle-associated membrane protein-associated protein B/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18523.18523.4 16.99 16.89 1.789 7 1 1 0 721.132 2801.5409 S206s TMT10 201 (K) TVQSNsPISALAPTGKEEGLSTR (L) T(0.0)VQS(0.0)NS(0.99)PIS(0.0)ALAPT(0.0)GKEEGLS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S VAPB 27456.1 4 7 1400.1 146.44 HUMAN 1 12.0903 -2.9871 RKVARTDSPDMHEDT-p Q9BW61;S95-p RKVARTDSPDMHEDT 0.2040437776167 0.0284058958503704 0.249666666666667 0.424333333333333 13.3706305713703 20.9488216585881 0.249666666666667 0.424333333333333 0.0460189751744585 0.00803744166992667 2.57807199835809 4.08154901277711 Q9BW61 DDA1 Q9BW61.S95.p_DDA1 Q9BW61_S95s_1_1_95_95 Q9BW61 Q9BW61 DET1- and DDB1-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4604.4604.3 7.96 7.96 1.622 3 1 1 0 600.2559 1702.7904 S95s M98m TMT10 90 (K) VARTDsPDmHEDT (-) VART(0.0)DS(0.99)PDM(1.0)HEDT(0.0) s:Phosphorylated S,m:Oxidized methionine DDA1 11892.1 4 2 3061.1 61.74 HUMAN 1 13.3706 20.9488 RKVDVERSPGGTPLT-p Q96HE9;S307-p RKVDVERSPGGTPLT 0.162505797171768 0.00695221592447754 -0.375 -0.54 15.801948006177 30.9374900111117 -0.375 -0.54 0.0262908846289877 0.000805844041222029 -3.0302539184011 -6.71142810285737 Q96HE9 PRR11 Q96HE9.S307.p_PRR11 Q96HE9_S307s _1_1_307_307 Q96HE9 Q96HE9 Proline-rich protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12893.12893.3 13.98 13.98 3.345 3 1 1 0 703.3774 2028.149 S307s TMT10 302 (K) VDVERsPGGTPLTNK (E) VDVERS(0.99)PGGT(0.0)PLT(0.0)NK K:TMT10,s:Phosphorylated S PRR11 40597.8 6 5 1094.1 178.6 HUMAN 1 -15.8019 -30.9375 RKVEEEGSPGDPDHE-p Q9NZT2;S315-p RKVEEEGSPGDPDHE 0.444636977587231 0.0198070948003416 0.102333333333333 0.342333333333333 6.48539888570847 23.369580938272 0.102333333333333 0.342333333333333 0.224626045461803 0.00460300987044789 1.37059886300271 4.63704186643537 Q9NZT2 OGFR Q9NZT2.S315.p_OGFR Q9NZT2_S315s _1_1_315_315 Q9NZT2 Q9NZT2|Q9NZT2-2|A0A0A0MRN5 Opioid growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5498.5498.3 22.58 22.58 22.578 3 1 1 0 769.3312 2226.0108 S315s TMT10 310 (K) VEEEGsPGDPDHEASTQGR (T) VEEEGS(0.99)PGDPDHEAS(0.0)T(0.0)QGR s:Phosphorylated S OGFR 73893.9 4 1 620.1 259.74 HUMAN 1 6.4854 23.3696 RKVELSESEEDKGGK-p A9Z1X7;S460-p RKVELSESEEDKGGK 0.575281775131801 0.0269995627488565 0.0826666666666667 0.354666666666667 4.41559736992914 21.2898044378592 0.0826666666666667 0.354666666666667 0.361776425140107 0.0074305259668812 0.995783491618877 4.15717338174705 A9Z1X7 NotFound A9Z1X7.S460.p_NotFound A9Z1X7_S460s _1_1_460_460 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11175.11175.5 13.13 13.13 2.071 2 1 1 0 507.0818 2451.4112 S460s TMT10 454 (R) KVELSEsEEDKGGK (M) KVELS(0.0)ES(0.99)EEDKGGK K:TMT10,s:Phosphorylated S SRRM1 103445.7 4 16 8.1 1346.57 HUMAN 1 4.4156 21.2898 RKVESTKTDSRDKPL-p P23284;T187-p RKVESTKTDSRDKPL 0.326502819643871 0.0930175903911019 -0.908 0.660666666666667 9.10191411348338 13.6415632149997 -0.908 0.660666666666667 0.122972666049967 0.0432358178483589 -1.8260062754024 2.62581477767978 P23284 PPIB P23284.T187.p_PPIB P23284_T187t _1_1_187_187 P23284 P23284 Peptidyl-prolyl cis-trans isomerase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7857.7857.4 8.96 8.96 1.428 2 1 1 0 457.5139 1747.0681 T187t TMT10 187 (K) tDSRDKPLK (D) T(0.99)DS(0.0)RDKPLK K:TMT10,t:Phosphorylated T PPIB 23799.1 1 1 6871.1 8.96 HUMAN 1 -9.1019 13.6416 RKVGRQESVDDLDRD-p O15021;S1526-p RKVGRQESVDDLDRD 0.176496196454084 0.763938303252188 -0.348333333333333 0.047 14.9516613997052 1.61517985181242 -0.348333333333333 0.047 0.0319767160186868 0.689417042158379 -2.86939013438546 0.421741860666047 O15021 MAST4 O15021.S1526.p_MAST4 O15021_S1526s _1_1_1526_1526 O15021 O15021|J3QT34 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10313.10313.3 10.82 9.26 99 1 1 1 0 619.9725 1777.9332 S1526s TMT10 1524 (R) QEsVDDLDRDK (L) QES(1.0)VDDLDRDK K:TMT10,s:Phosphorylated S MAST4 286597.7 2 10 121.99 549.41 HUMAN 1 -14.9517 1.6152 RKVIKMESEEGKEAR-p P29590-8;S493-p RKVIKMESEEGKEAR 0.168743407773913 0.00656479998141686 -0.287333333333333 0.532666666666667 15.4152135523995 31.3912264461194 -0.287333333333333 0.532666666666667 0.0287394627171532 0.000725900934313729 -2.95669366015724 6.85529667642412 P29590 PML P29590.8.S493.p_PML P29590-8_S493s _1_1_493_493 P29590-8 P29590|P29590-11|P29590-8 Isoform PML-2 of Protein PML HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14064.14064.3 8.83 8.83 99 1 1 1 0 639.6847 1837.0708 S493s TMT10 488 (K) VIKMEsEEGK (E) VIKMES(1.0)EEGK K:TMT10,s:Phosphorylated S PML 92374.1 1 9 777.1 226.8 HUMAN 1 -15.4152 31.3912 RKVKVLGSGAFGTVY-p P04626;S728-p RKVKVLGSGAFGTVY 0.134150744259901 0.559006029167553 -0.347333333333333 0.0613333333333333 17.9440794716009 3.40598067640096 -0.347333333333333 0.0613333333333334 0.0160543250870288 0.456459165936849 -3.4509569033147 0.801609764490774 P04626 ERBB2 P04626.S728.p_ERBB2 P04626_S728s _1_1_728_728 P04626 Q15303|Q15303-2|Q15303-3|E9PFD7|Q504U8|J3QLU9|B4DTR1|P04626-6|P04626-2|Q15303-4|A0A0A0MSE1|P04626-4|P04626-5|P00533 Receptor tyrosine-protein kinase erbB-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24848.24848.3 14.2 9.57 3.183 3 1 1 0 579.6524 1656.9725 S728s TMT10 725 (K) VLGsGAFGTVYK (G) VLGS(0.99)GAFGT(0.0)VY(0.0)K K:TMT10,s:Phosphorylated S ERBB2 141274.2 2 13 521.1 283.33 HUMAN 1 -17.9441 3.406 RKVLISDSLDPCCRK-p A0A2C9F2M7;S14-p RKVLISDSLDPCCRK 0.992771175265535 0.870006215796507 -0.00200000000000001 0.0333333333333333 0.0668915974783647 0.853381405426019 -0.00200000000000001 0.0333333333333334 0.984715650166634 0.821602703142853 -0.0200583886144203 0.236662359478587 A0A2C9F2M7 NotFound A0A2C9F2M7.S14.p_NotFound A0A2C9F2M7_S14s _1_1_14_14 A0A2C9F2M7 O43175|A0A2C9F2M7|A0A286YF22|A0A286YFA2|A0A286YFL2|A0A286YFB2|A0A286YFK5|A0A286YFC8|A0A286YER3|A0A286YFF3 D-3-phosphoglycerate dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18576.18576.4 14.46 10.03 2.066 2 1 1 0 526.0187 2021.0924 S14s TMT10 9 (K) VLISDsLDPCCRK (I) VLIS(0.0)DS(0.99)LDPCCRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PHGDH 56909.6 2 1 1205.1 166.89 HUMAN 1 -0.0669 0.8534 RKVNAEGSVDSVFSQ-p Q5T9B7;S194-p RKVNAEGSVDSVFSQ 0.770087115709017 0.0302643232240756 0.044 0.417333333333333 2.17283019885456 20.5501701199749 0.044 0.417333333333333 0.606341062060837 0.00881014361614753 0.546745231725218 3.99416087070265 Q5T9B7 AK1 Q5T9B7.S194.p_AK1 Q5T9B7_S194s _1_1_194_194 Q5T9B7 Q5T9B7|P00568 Adenylate kinase isoenzyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27682.27682.4 22.19 22.19 1.245 4 1 1 0 818.6807 3191.7338 S194s TMT10 188 (R) KVNAEGsVDSVFSQVCTHLDALK (-) KVNAEGS(0.99)VDS(0.0)VFS(0.0)QVCT(0.0)HLDALK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S AK1 23638.6 3 2 3153.1 59.14 HUMAN 1 2.1728 20.5502 RKVSPESSPDQEETE-p Q8IYW5;S415-p RKVSPESSPDQEETE 0.225596004363036 0.0339566328439142 0.278666666666667 -0.269333333333333 12.4134622821871 19.7999287057965 0.278666666666667 -0.269333333333333 0.0573658947512697 0.0104714573795582 2.4058933632815 -3.83260325556748 Q8IYW5 RNF168 Q8IYW5.S415.p_RNF168 Q8IYW5_S411sS414sS415s_3_3_411_415 Q8IYW5 Q8IYW5 E3 ubiquitin-protein ligase RNF168 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19776.19776.3 11.5 11.5 2.796 5 3 3 0 997.7803 2751.4089 S411s S414s S415s Hydrogen 409 (R) KVsPEssPDQEETEINFTQK (L) KVS(0.99)PES(0.99)S(0.99)PDQEET(0.0)EINFT(0.0)QK K:TMT10-Lys-Only,s:Phosphorylated S RNF168 66159.9 3 11 1172.1 170.1 HUMAN 1 12.4135 -19.7999 RKVTPIDSPPVWSPE-p Q5JSZ5;S740-p RKVTPIDSPPVWSPE 0.453746543710854 0.0289613527604455 -0.101333333333333 -0.296333333333333 6.33119189404202 20.8278270442121 -0.101333333333333 -0.296333333333333 0.232745241524788 0.00826451354107017 -1.34335527368233 -4.05491012058003 Q5JSZ5 PRRC2B Q5JSZ5.S740.p_PRRC2B Q5JSZ5_S740s _1_1_740_740 Q5JSZ5 Q5JSZ5|Q5JSZ5-5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27542.27542.3 22.27 22.27 4.936 5 1 1 0 1066.5692 3117.7262 S740s TMT10 734 (R) KVTPIDsPPVWSPEGYMALQSK (G) KVT(0.0)PIDS(0.99)PPVWS(0.0)PEGY(0.0)MALQS(0.0)K K:TMT10,s:Phosphorylated S PRRC2B 244103.4 5 63 36.2 882.05 HUMAN 1 -6.3312 -20.8278 RKYGKSLYYYIQQDT-p P07355-2;Y334-p RKYGKSLYYYIQQDT 0.665910502569337 0.127949246266623 -0.0906666666666667 0.289666666666667 3.30130269293477 11.7736388432516 -0.0906666666666667 0.289666666666667 0.467594862302662 0.0664715974163944 -0.780973172313311 2.29112973631353 P07355 ANXA2 P07355.2.Y334.p_ANXA2 P07355-2_Y334y _1_1_334_334 P07355-2 P07355-2|A6NMY6 Isoform 2 of Annexin A2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.24680.24680.3 22.41 22.41 2.176 6 1 1 0 927.4763 2700.4488 Y334y TMT10 332 (K) SLyYYIQQDTKGDYQK (A) S(0.0)LY(0.99)Y(0.0)Y(0.0)IQQDT(0.0)KGDY(0.0)QK K:TMT10,y:Phosphorylated Y ANXA2 40695.7 2 4 8.1 109.57 HUMAN 1 -3.3013 11.7736 RKYIEIDSDEEPRGE-p Q9NVU7;S585-p RKYIEIDSDEEPRGE 0.486932192244721 0.467953517260107 0.0973333333333333 -0.077 5.75751864124629 4.39644616822271 0.0973333333333333 -0.077 0.265612271477033 0.363375283139387 1.24124453260643 -0.992011311563337 Q9NVU7 SDAD1 Q9NVU7.S585.p_SDAD1 Q9NVU7_S585s _1_1_585_585 Q9NVU7 Q9NVU7|E7EW05|Q9NVU7-2 Protein SDA1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24069.24675.3 20.79 17.11 8.634 3 1 1 0 815.0717 2363.2292 S585s TMT10 580 (K) YIEIDsDEEPRGELLSLR (D) Y(0.0)IEIDS(0.99)DEEPRGELLS(0.0)LR s:Phosphorylated S SDAD1 80326.4 27 1 1435.1 142.63 HUMAN 1 5.7575 -4.3964 RLAAQESSEAEDMSV-p A0A0A0MR88;S1054-p RLAAQESSEAEDMSV 0.93306667659969 0.757356365974704 -0.0203333333333333 -0.0356666666666666 0.593109170514632 1.66726475866031 -0.0203333333333333 -0.0356666666666667 0.872346620524147 0.681198250855747 -0.168450026956902 -0.433738664746385 A0A0A0MR88 NotFound A0A0A0MR88.S1054.p_NotFound A0A0A0MR88_S1054s _1_1_1054_1054 A0A0A0MR88 A0A0A0MR88|A0A096LPC5|Q9Y4E1-4|Q9Y4E1-2|Q9Y4E1-6 WASH complex subunit 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11636.11636.3 11.39 11.39 1.269 3 1 1 0 729.011 2105.0494 S1054s TMT10 1047 (R) RLAAQESsEAEDMSVPR (G) RLAAQES(0.0)S(0.99)EAEDMS(0.0)VPR s:Phosphorylated S WASHC2C 147223 2 12 12.99 1178.3 HUMAN 1 -0.5931 -1.6673 RLAAQESSETEDMSV-p Q641Q2;S1054-p RLAAQESSETEDMSV 0.570368207991043 0.910404590195555 0.0753333333333333 -0.017 4.48804000977994 0.571003694274277 0.0753333333333333 -0.017 0.355791852779366 0.876798161650736 1.00934286233627 -0.162497978288225 Q641Q2 FAM21A Q641Q2.S1054.p_FAM21A Q641Q2_S1054s _1_1_1054_1054 Q641Q2 Q641Q2|Q641Q2-2|E7ESD2|F8W7U3|A0A087WYF6 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15144.15144.2 15.68 11.84 1.104 4 1 1 0 1029.9674 1978.9589 S1054s TMT10 1048 (R) LAAQESsETEDMSVPR (G) LAAQES(0.0)S(0.99)ET(0.0)EDMS(0.0)VPR s:Phosphorylated S WASHC2A 147352.2 5 55 12.1 1178.3 HUMAN 1 4.488 -0.571 RLALGDDSPALKEKR-p P17174;S93-p RLALGDDSPALKEKR 0.178115895866256 0.296128583215862 -0.211 -0.132 14.8029723655863 6.97681005118992 -0.211 -0.132 0.0330904568750773 0.200594487869016 -2.84157951093024 -1.45655224612058 P17174 GOT1 P17174.S93.p_GOT1 P17174_S93s _1_1_93_93 P17174 P17174|P17174-2 Aspartate aminotransferase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21845.21845.3 7.07 7.07 99 1 1 1 0 546.6357 1557.9252 S93s TMT10 87 (R) LALGDDsPALK (E) LALGDDS(1.0)PALK K:TMT10,s:Phosphorylated S GOT1 46474.8 1 1 4359.1 32.8 HUMAN 1 -14.803 -6.9768 RLANFCFTPPSESKS-p Q9NXL9;T1064-p RLANFCFTPPSESKS 0.272925101260209 0.0720886126494586 -0.181333333333333 -0.316 10.6810806846803 15.1773143393142 -0.181333333333333 -0.316 0.085485396725344 0.0303576791127334 -2.10032664875808 -2.90984686253869 Q9NXL9 MCM9 Q9NXL9.T1064.p_MCM9 Q9NXL9_T1064t _1_1_1064_1064 Q9NXL9 Q9NXL9|Q9NXL9-4 DNA helicase MCM9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25751.25751.3 10.41 10.41 10.411 3 1 1 0 679.3386 1956.0301 T1064t TMT10 1058 (R) LANFCFtPPSESK (S) LANFCFT(0.99)PPS(0.0)ES(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MCM9 128793.8 1 5 1757.1 117.14 HUMAN 1 -10.6811 -15.1773 RLAPWQASPPHPCRF-p Q8IY92;S1028-p RLAPWQASPPHPCRF 0.582575200829836 0.0522517366091346 0.0943333333333333 -0.233333333333333 4.3182162843507 17.1061787837979 0.0943333333333334 -0.233333333333333 0.369980105219325 0.0194707249406214 0.977488875909938 -3.28105728193639 Q8IY92 SLX4 Q8IY92.S1028.p_SLX4 Q8IY92_S1028s _1_1_1028_1028 Q8IY92 Q8IY92|Q8IY92-2 Structure-specific endonuclease subunit SLX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16173.16449.3 18.2 18.2 99 1 1 1 0 609.2972 1745.9107 S1028s TMT10 1022 (R) LAPWQAsPPHPCR (F) LAPWQAS(1.0)PPHPCR C:Carbamidomethylation,s:Phosphorylated S SLX4 201834.1 4 11 218.1 430.83 HUMAN 1 4.3182 -17.1062 RLARLQLSPDFTFTA-p Q9HBM0;S732-p RLARLQLSPDFTFTA 0.211405693252962 0.270443405119256 0.203 0.141333333333333 13.0269112460193 7.47798335077054 0.203 0.141333333333333 0.0498091207423584 0.178731732414275 2.51591731787699 1.54399294016948 Q9HBM0 VEZT Q9HBM0.S732.p_VEZT Q9HBM0_S732s _1_1_732_732 Q9HBM0 Q9HBM0 Vezatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.37030.37030.3 12.67 12.67 1.264 3 1 1 0 796.4161 2307.2546 S732s TMT10 729 (R) LQLsPDFTFTAGLAAEVAAR (S) LQLS(0.99)PDFT(0.0)FT(0.0)AGLAAEVAAR s:Phosphorylated S VEZT 89518.7 1 5 2200.1 93.61 HUMAN 1 13.0269 7.478 RLASEYLTPEEMVTF-p O43290;T392-p RLASEYLTPEEMVTF 0.302068454531195 0.805891684538003 0.151333333333333 0.0386666666666667 9.74288620414771 1.31208024762883 0.151333333333333 0.0386666666666667 0.106099021732952 0.739251092870559 1.93707361493808 0.350390817927922 O43290 SART1 O43290.T392.p_SART1 O43290_T392t _1_1_392_392 O43290 O43290 U4/U6.U5 tri-snRNP-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27278.27278.3 17.02 17.02 3.711 4 1 1 0 885.14 2573.4504 T392t TMT10 386 (R) LASEYLtPEEMVTFKK (T) LAS(0.0)EY(0.0)LT(0.99)PEEMVT(0.0)FKK K:TMT10,t:Phosphorylated T SART1 90424.4 1 2 2155.1 95.34 HUMAN 1 9.7429 1.3121 RLAVISDSGEKRVTI-p Q03164-3;S2958-p RLAVISDSGEKRVTI 0.515757067329565 0.00517027241772152 -0.0933333333333333 -0.524333333333333 5.31103335109824 33.2657989351223 -0.0933333333333334 -0.524333333333334 0.294372112768897 0.000471433137759701 -1.16076341293304 -7.47708224656296 Q03164 KMT2A Q03164.3.S2958.p_KMT2A Q03164-3_S2958s _1_1_2958_2958 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18433.18433.2 14.27 10.33 2.277 2 1 1 0 778.9202 1476.8674 S2958s TMT10 2952 (R) LAVISDsGEK (R) LAVIS(0.0)DS(0.99)GEK K:TMT10,s:Phosphorylated S KMT2A 436608.3 2 35 26.1 936.8 HUMAN 1 -5.311 -33.2658 RLCSSSDTLVSEGEE-p Q5T0W9;T806-p RLCSSSDTLVSEGEE 0.17909935093331 0.129569147656071 0.258666666666667 0.202333333333333 14.748696008202 11.69694197563 0.258666666666667 0.202333333333333 0.0335066029375899 0.067655919748667 2.83145043865305 2.27759022009649 Q5T0W9 FAM83B Q5T0W9.T806.p_FAM83B Q5T0W9_T806tS809s_2_2_806_809 Q5T0W9 Q5T0W9 Protein FAM83B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15814.15814.3 10.55 10.55 1.367 5 2 2 0 985.806 2795.47 T806t S809s TMT10 800 (R) LCSSSDtLVsEGEENQKPK (K) LCS(0.0)S(0.0)S(0.0)DT(0.99)LVS(0.99)EGEENQKPK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S FAM83B 115253.5 1 24 249.1 407.75 HUMAN 1 14.7487 11.6969 RLDADSDSGDDSDKR-p O60333-3;S665-p RLDADSDSGDDSDKR 0.363237668928785 0.0238611578663223 -0.129 -0.446 8.16750913353671 22.1170447939897 -0.129 -0.446 0.152492711460657 0.00614179788602119 -1.66420709686339 -4.34412058454877 O60333 KIF1B O60333.3.S665.p_KIF1B O60333-3_S663sS665s_2_2_663_665 O60333-3 O60333-3 Isoform 3 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18093.18093.4 11.51 11.51 4.094 3 2 2 0 981.9653 3764.9029 S663s S665s TMT10 646 (K) EKEEADLLLEQQRLDADsDsGDDSDKR (S) EKEEADLLLEQQRLDADS(0.99)DS(0.99)GDDS(0.0)DKR K:TMT10,s:Phosphorylated S KIF1B 131388.1 5 19 606.2 262.24 HUMAN 1 -8.1675 -22.117 RLDGLVETPTGYIES-p F5H4R6;T62-p RLDGLVETPTGYIES 0.773596108491475 0.392560628970657 -0.0446666666666667 -0.124 2.13293522059138 5.39887444121319 -0.0446666666666667 -0.124 0.611936668709344 0.288477905296262 -0.538044305955361 -1.17642352716079 F5H4R6 NAP1L1 F5H4R6.T62.p_NAP1L1 F5H4R6_T62t _1_1_62_62 F5H4R6 P55209|F5H4R6|F8W0J6|P55209-2|B7Z9C2|F8VV59|P55209-3 Nucleosome assembly protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31387.31592.3 19.41 19.41 2.504 4 1 1 0 723.7053 2089.1379 T62t TMT10 56 (R) LDGLVEtPTGYIESLPR (V) LDGLVET(0.99)PT(0.0)GY(0.0)IES(0.0)LPR t:Phosphorylated T NAP1L1 44911.2 7 2 836.1 215.14 HUMAN 1 -2.1329 -5.3989 RLDHGEESNESAESS-p Q9H4L7-2;S239-p RLDHGEESNESAESS 0.946761617823574 0.0194182157756464 0.014 0.338666666666667 0.469955524765762 23.5129596372192 0.014 0.338666666666667 0.897437984937626 0.00445352645301874 0.135070928288077 4.67136493112585 Q9H4L7 SMARCAD1 Q9H4L7.2.S239.p_SMARCAD1 Q9H4L7-2_S239s _1_1_239_239 Q9H4L7-2 Q9H4L7-2 Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9165.9165.3 15.4 15.4 1.201 6 1 1 0 977.4459 2850.3542 S239s TMT10 231 (K) TRLDHGEEsNESAESSSNWEK (Q) T(0.0)RLDHGEES(0.99)NES(0.0)AES(0.0)S(0.0)S(0.0)NWEK K:TMT10,s:Phosphorylated S SMARCAD1 118399.2 4 9 250.1 406.83 HUMAN 1 0.47 23.513 RLDMEDPSCEMCLSK-p P36896-4;S168-p RLDMEDPSCEMCLSK 0.660414873314641 0.138057980544252 0.075 0.158666666666667 3.37345826691532 11.3303689914157 0.075 0.158666666666667 0.459890219278522 0.0736144549484006 0.795296727956835 2.21305912757061 P36896 ACVR1B P36896.4.S168.p_ACVR1B P36896-4_S168s _1_1_168_168 P36896-4 P36896-4|P36896-3|P36896-2|P36896-5 Isoform 4 of Activin receptor type-1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17031.17031.3 16.96 10.04 5.535 2 1 1 0 846.3821 2457.1646 S168s TMT10 160 (R) QRLDMEDPsCEMCLSK (D) QRLDMEDPS(0.99)CEMCLS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ACVR1B 62465 4 1 4783.1 26.69 HUMAN 1 3.3735 11.3304 RLDNVPHTPSSYIET-p Q99733-2;T51-p RLDNVPHTPSSYIET 0.737147411232257 0.0221420189415373 0.0456666666666667 -0.306333333333333 2.50902829967595 22.6019935763461 0.0456666666666667 -0.306333333333333 0.56117352022339 0.00549288671648856 0.618795885991309 -4.45608501871797 Q99733 NAP1L4 Q99733.2.T51.p_NAP1L4 Q99733-2_T51t _1_1_51_51 Q99733-2 Q99733-2 Isoform 2 of Nucleosome assembly protein 1-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23460.23460.2 15 10.91 1.275 5 1 1 0 1225.1405 2369.3117 T51t TMT10 45 (R) LDNVPHtPSSYIETLPK (A) LDNVPHT(0.99)PS(0.0)S(0.0)Y(0.0)IET(0.0)LPK K:TMT10,t:Phosphorylated T NAP1L4 44306.2 5 4 1403.1 146.36 HUMAN 1 2.509 -22.602 RLDSPPPSPITEASE-p Q9C0C2;S498-p RLDSPPPSPITEASE 0.970811478408808 0.422309218009305 0.00600000000000001 0.082 0.253069304356132 4.98387390290627 0.006 0.082 0.943393912600475 0.317404156529529 0.0743620882131129 1.10088018030827 Q9C0C2 TNKS1BP1 Q9C0C2.S498.p_TNKS1BP1 Q9C0C2_S494sS498s_2_2_494_498 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31441.31845.3 23.37 19.63 1.766 6 2 2 0 999.7775 2837.3799 S494s S498s Hydrogen 492 (R) LDsPPPsPITEASEAAEAAEAGNLAVSSR (E) LDS(0.99)PPPS(0.99)PIT(0.0)EAS(0.0)EAAEAAEAGNLAVS(0.0)S(0.0)R s:Phosphorylated S TNKS1BP1 182819.3 31 75 4.1 2105.7 HUMAN 1 0.2531 4.9839 RLEAGGASPKLRWDH-p O95873;S112-p RLEAGGASPKLRWDH 0.890988784685547 0.00352917669002825 0.0206666666666667 -0.735333333333333 0.980299097292149 36.6270791282798 0.0206666666666667 -0.735333333333333 0.79793973150837 0.000217416293263972 0.26892933653241 -8.71294228717078 O95873 C6orf47 O95873.S112.p_C6orf47 O95873_S112s _1_1_112_112 O95873 O95873 Uncharacterized protein C6orf47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16605.16605.5 22.34 17.11 1.108 6 1 1 0 760.5953 3718.979 S112s TMT10 87 (K) RMDSLKWDQPISSTQESGRLEAGGAsPK (L) RMDS(0.0)LKWDQPIS(0.0)S(0.0)T(0.0)QES(0.0)GRLEAGGAS(0.99)PK K:TMT10,s:Phosphorylated S C6orf47 31880.5 10 2 1923.1 106.86 HUMAN 1 0.9803 -36.6271 RLEARRNSPAFLSTD-p Q9UPX8-3;S1099-p RLEARRNSPAFLSTD 0.630154689695046 0.110148211194914 0.07 0.179 3.73062664095745 12.6525985008941 0.07 0.179 0.423581843264554 0.0542925387403786 0.865275218035737 2.44735132512237 Q9UPX8 SHANK2 Q9UPX8.3.S1099.p_SHANK2 Q9UPX8-3_S1099s _1_1_1099_1099 Q9UPX8-3 Q9UPX8-3|A6NHU9 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22763.22763.3 17.21 17.21 5.596 3 1 1 0 930.7962 2710.3998 S1099s TMT10 1097 (R) RNsPAFLSTDLGDEDVGLGPPAPR (T) RNS(0.99)PAFLS(0.0)T(0.0)DLGDEDVGLGPPAPR s:Phosphorylated S SHANK2 202341.2 3 16 86.1 628.23 HUMAN 1 3.7306 12.6526 RLEEDRHSIDITSEL-p Q5PSV4;S174-p RLEEDRHSIDITSEL 0.351536663952324 0.0418159080531837 0.188666666666667 0.558333333333333 8.43415985744385 18.4770400651854 0.188666666666667 0.558333333333333 0.143411511875357 0.0142002501025419 1.71040508803531 3.55645131858678 Q5PSV4 BRMS1L Q5PSV4.S174.p_BRMS1L Q5PSV4_S174s _1_1_174_174 Q5PSV4 Q5PSV4 Breast cancer metastasis-suppressor 1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20151.20151.4 7.78 7.78 1.156 4 1 1 0 788.3853 3070.5391 S174s TMT10 167 (R) RLEEDRHsIDITSELWNDELQSR (K) RLEEDRHS(0.99)IDIT(0.0)S(0.0)ELWNDELQS(0.0)R s:Phosphorylated S BRMS1L 38027.8 1 1 3512.1 49.33 HUMAN 1 8.4342 18.477 RLEEDRQSLDLSSEW-p G5E9I4;S173-p RLEEDRQSLDLSSEW 0.193883926313618 0.163334598344602 0.281666666666667 0.156 13.909170463307 10.3453712301349 0.281666666666667 0.156 0.0406520970459619 0.0923555240561773 2.67625713974943 2.04092468133944 G5E9I4 BRMS1 G5E9I4.S173.p_BRMS1 G5E9I4_S173s _1_1_173_173 G5E9I4 G5E9I4|Q9HCU9 Breast cancer metastasis suppressor 1, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25736.25736.3 15.84 12.19 1.216 3 1 1 0 930.4401 2709.3408 S173s TMT10 167 (R) LEEDRQsLDLSSEWWDDK (L) LEEDRQS(0.99)LDLS(0.0)S(0.0)EWWDDK K:TMT10,s:Phosphorylated S BRMS1 34056.6 2 1 3486.1 49.85 HUMAN 1 13.9092 10.3454 RLEEGVASDEEAEEA-p Q7Z406-2;S2010-p RLEEGVASDEEAEEA 0.227824784716705 0.0152362677395447 0.208666666666667 0.396666666666667 12.347401064533 25.1390997096188 0.208666666666667 0.396666666666667 0.0582451668307604 0.0030625982430397 2.39410978617056 5.07271558993899 Q7Z406 MYH14 Q7Z406.2.S2010.p_MYH14 Q7Z406-2_S2010s _1_1_2010_2010 Q7Z406-2 Q7Z406-2|Q7Z406-6|Q7Z406-4|A1L2Z2 Isoform 2 of Myosin-14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15220.15220.3 28.04 28.04 5.541 4 1 1 0 1207.5347 3540.6088 S2010s TMT10 2004 (R) LEEGVAsDEEAEEAQPGSGPSPEPEGSPPAHPQ (-) LEEGVAS(0.99)DEEAEEAQPGS(0.0)GPS(0.0)PEPEGS(0.0)PPAHPQ s:Phosphorylated S MYH14 233033.9 10 51 296.6 379.15 HUMAN 1 12.3474 25.1391 RLEGFRKSEVAAYLQ-p Q8NDX1;S604-p RLEGFRKSEVAAYLQ 0.0286358512894737 0.10713346825862 -0.756666666666667 -0.185666666666667 36.1212595587693 12.815865754545 -0.756666666666667 -0.185666666666667 0.000244272200164036 0.0522893718314162 -8.5335377901624 -2.47660339553197 Q8NDX1 PSD4 Q8NDX1.S604.p_PSD4 Q8NDX1_S604s _1_1_604_604 Q8NDX1 Q8NDX1 PH and SEC7 domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21706.21706.4 7.76 7.76 7.001 2 1 1 0 570.0658 2197.2745 S604s Hydrogen 598 (R) LEGFRKsEVAAYLQK (N) LEGFRKS(0.99)EVAAY(0.0)LQK K:TMT10-Lys-Only,s:Phosphorylated S PSD4 117388.3 1 5 3127.1 60.04 HUMAN 1 -36.1213 -12.8159 RLEICNLTPDALKSR-p P07384;T354-p RLEICNLTPDALKSR 0.265419473261086 0.697177039463929 -0.226 0.0703333333333333 10.9211140471691 2.15359492982645 -0.226 0.0703333333333334 0.0808888377454261 0.609032553805291 -2.14229482399229 0.542489514081839 P07384 CAPN1 P07384.T354.p_CAPN1 P07384_T354t _1_1_354_354 P07384 P07384 Calpain-1 catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27068.27068.3 13.83 13.83 99 1 1 1 0 642.3452 1845.0556 T354t TMT10 348 (R) LEICNLtPDALK (S) LEICNLT(1.0)PDALK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CAPN1 82516.1 1 5 1866.1 110.2 HUMAN 1 -10.9211 2.1536 RLEISPDSSPERAHY-p Q99959;S154-p RLEISPDSSPERAHY 0.422925979108925 0.153486072232388 0.116333333333333 0.261333333333333 6.88311476443656 10.7029293846021 0.116333333333333 0.261333333333333 0.20496916106365 0.0850564125784043 1.44053715841267 2.10322396107121 Q99959 PKP2 Q99959.S154.p_PKP2 Q99959_S154sS155s_2_2_154_155 Q99959 Q99959|Q99959-2 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12660.12660.3 7.41 7.41 3.392 3 2 2 0 592.2707 1614.8649 S154s S155s TMT10 147 (R) RLEISPDssPER (A) RLEIS(0.0)PDS(0.99)S(0.99)PER s:Phosphorylated S PKP2 97926.6 5 23 257.1 399.17 HUMAN 1 6.8831 10.7029 RLEKDRFSVNLDVKH-p P02511;S76-p RLEKDRFSVNLDVKH 0.102728705875057 0.0659953549830547 -0.412333333333333 -0.258333333333333 20.8691702854075 15.7052836750042 -0.412333333333333 -0.258333333333333 0.00818621169825198 0.026882622438476 -4.06801665590224 -3.0097257198534 P02511 CRYAB P02511.S76.p_CRYAB P02511_S76s _1_1_76_76 P02511 P02511|E9PRA8|A0A024R3B9 Alpha-crystallin B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19379.19379.3 7.99 7.99 99 1 1 1 0 577.6463 1650.9579 S76s TMT10 73 (K) DRFsVNLDVK (H) DRFS(1.0)VNLDVK K:TMT10,s:Phosphorylated S CRYAB 20158.5 2 1 7050.1 7.99 HUMAN 1 -20.8692 -15.7053 RLEQMEDSEGTVRQI-p Q86W92-2;S959-p RLEQMEDSEGTVRQI 0.08581207963261 0.153816048765111 -0.365 -0.192333333333333 22.8190989048375 10.6909942241419 -0.365 -0.192333333333333 0.00522504589528329 0.0852904837382472 -4.5117922083292 -2.10114133603253 Q86W92 PPFIBP1 Q86W92.2.S959.p_PPFIBP1 Q86W92-2_S959s _1_1_959_959 Q86W92-2 Q86W92|Q86W92-2|Q86W92-4|Q86W92-3 Isoform 2 of Liprin-beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22871.22871.3 18.14 18.14 2.643 3 1 1 0 951.0903 2771.2879 S959s TMT10 944 (R) LYEEDDLDRLEQMEDsEGTVR (Q) LY(0.0)EEDDLDRLEQMEDS(0.99)EGT(0.0)VR s:Phosphorylated S PPFIBP1 113749.6 1 16 449.1 309.07 HUMAN 1 -22.8191 -10.691 RLEQTQKSKPVFSES-p O60220;S87-p RLEQTQKSKPVFSES 0.981575064370413 0.35232300272229 -0.00433333333333333 0.111 0.161098381305204 6.0062084339158 -0.00433333333333334 0.111 0.963585290865744 0.250829814289825 -0.0478065444767778 1.28536342604079 O60220 TIMM8A O60220.S87.p_TIMM8A O60220_S87s _1_1_87_87 O60220 O60220 Mitochondrial import inner membrane translocase subunit Tim8 A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18750.18750.2 7.17 7.17 1.238 4 1 1 0 867.4446 1653.91 S87s TMT10 87 (K) sKPVFSESLSD (-) S(0.99)KPVFS(0.0)ES(0.0)LS(0.0)D K:TMT10,s:Phosphorylated S TIMM8A 11226.4 1 3 3648.1 46.12 HUMAN 1 -0.1611 6.0062 RLERDVWSAPSSLRL-p Q70EL4;S1065-p RLERDVWSAPSSLRL 0.156870667579318 0.871755047100959 0.233333333333333 0.0213333333333333 16.1380895919117 0.840476055269097 0.233333333333333 0.0213333333333334 0.0243327414109818 0.824047781424578 3.09475001591771 0.233347994252582 Q70EL4 USP43 Q70EL4.S1065.p_USP43 Q70EL4_S1065s _1_1_1065_1065 Q70EL4 Q70EL4 Ubiquitin carboxyl-terminal hydrolase 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22151.22151.3 8.23 8.23 8.229 3 1 1 0 598.3161 1712.9645 S1065s TMT10 1062 (R) DVWsAPSSLRLPR (K) DVWS(0.99)APS(0.0)S(0.0)LRLPR s:Phosphorylated S USP43 124119.2 2 11 817.1 219.69 HUMAN 1 16.1381 0.8405 RLERFFDSEDEDFEI-p Q9Y4P1;S383-p RLERFFDSEDEDFEI 0.983596559616755 0.105858984291583 0.00399999999999999 -0.247 0.142644862763943 12.885279508295 0.00399999999999999 -0.247 0.967688352480651 0.051460268654958 0.0424158254910311 -2.48906404532562 Q9Y4P1 ATG4B Q9Y4P1.S383.p_ATG4B Q9Y4P1_S383s _1_1_383_383 Q9Y4P1 Q9Y4P1|Q9Y4P1-4 Cysteine protease ATG4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.37905.37905.2 18.34 18.34 7.552 2 1 1 0 1007.9426 1934.9109 S383s TMT10 380 (R) FFDsEDEDFEILSL (-) FFDS(0.99)EDEDFEILS(0.0)L s:Phosphorylated S ATG4B 45035.3 5 2 4266.1 34.5 HUMAN 1 0.1426 -12.8853 RLESDSYSPPHVRRK-p Q86X10;S1453-p RLESDSYSPPHVRRK 0.511696284595283 0.0950158945147294 0.137 0.435666666666667 5.3801526694672 13.5174831141336 0.137 0.435666666666667 0.289724173788616 0.044488902125982 1.17328934179244 2.60324931369539 Q86X10 RALGAPB Q86X10.S1453.p_RALGAPB Q86X10_S1453s _1_1_1453_1453 Q86X10 Q86X10 Ral GTPase-activating protein subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8014.8014.3 10.43 10.43 2.664 4 1 1 0 617.9706 1771.9289 S1453s TMT10 1446 (K) RLESDSYsPPHVR (R) RLES(0.0)DS(0.0)Y(0.0)S(0.99)PPHVR s:Phosphorylated S RALGAPB 168564.2 1 13 1153.1 171.93 HUMAN 1 5.3802 13.5175 RLESEDDSLGWGAPD-p Q9Y6R4;S503-p RLESEDDSLGWGAPD 0.708105602459154 0.554743243006358 0.0913333333333333 -0.101333333333333 2.81762751111459 3.44786630127729 0.0913333333333333 -0.101333333333333 0.522681644558211 0.452077996776832 0.683120555425921 -0.809875434552657 Q9Y6R4 MAP3K4 Q9Y6R4.S503.p_MAP3K4 Q9Y6R4_S499sS503s_2_2_499_503 Q9Y6R4 Q9Y6R4 Mitogen-activated protein kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25835.25835.4 10.86 6.5 10.861 5 2 2 0 914.9218 3496.7385 S499s S503s TMT10 493 (K) KLERLEsEDDsLGWGAPDWSTEAGFSR (H) KLERLES(0.99)EDDS(0.99)LGWGAPDWS(0.0)T(0.0)EAGFS(0.0)R K:TMT10,s:Phosphorylated S MAP3K4 183393.1 1 11 1091.1 179.07 HUMAN 1 2.8176 -3.4479 RLESSDLTPPHSPPP-p Q9H7P9;T1257-p RLESSDLTPPHSPPP 0.108085133456159 0.0596704447182032 0.362 -0.313333333333333 20.3054164706257 16.3106385238397 0.362 -0.313333333333333 0.0093209108233742 0.023384933951114 3.94480477053616 -3.12580362251145 Q9H7P9 PLEKHG2 Q9H7P9.T1257.p_PLEKHG2 Q9H7P9_T1257tS1261s_2_2_1257_1261 Q9H7P9 Q9H7P9|Q9H7P9-3 Pleckstrin homology domain-containing family G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14063.14063.3 13.57 13.57 2.792 6 2 2 0 731.6659 2033.0501 T1257t S1261s TMT10 1251 (R) LESSDLtPPHsPPPSSR (Q) LES(0.0)S(0.0)DLT(0.99)PPHS(0.99)PPPS(0.0)S(0.0)R t:Phosphorylated T,s:Phosphorylated S PLEKHG2 149335.7 1 15 886.1 206.23 HUMAN 1 20.3054 -16.3106 RLFDDEASVDEPRRT-p Q8NI35;S645-p RLFDDEASVDEPRRT 0.985275869892238 0.494102801812023 -0.003 0.0836666666666667 0.129420809099581 4.09355004794681 -0.003 0.0836666666666667 0.970639406611965 0.389623367128645 -0.0385395598147241 0.934808991359419 Q8NI35 INADL Q8NI35.S645.p_INADL Q8NI35_S645s _1_1_645_645 Q8NI35 Q8NI35|Q8NI35-2|Q8NI35-3|Q8NI35-4|A0A087WUZ6|A0A0X1KG69|Q8NI35-5|A0A0U1RR46 InaD-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18915.18915.2 15.36 9.69 99 1 1 1 0 851.3818 1621.7907 S645s TMT10 639 (R) LFDDEAsVDEPR (R) LFDDEAS(1.0)VDEPR s:Phosphorylated S PATJ 197163.3 11 9 127.1 542.92 HUMAN 1 -0.1294 4.0936 RLFDTPHTPKSLLSK-p P30291;T190-p RLFDTPHTPKSLLSK 0.371567802822301 0.00236955360943521 0.141666666666667 -0.718666666666667 7.97351463098286 40.315574659335 0.141666666666667 -0.718666666666667 0.159458816667786 9.29913460276084e-05 1.63056575442409 -10.2742208379836 P30291 WEE1 P30291.T190.p_WEE1 P30291_T190t _1_1_190_190 P30291 P30291 Wee1-like protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15115.15115.3 13.09 13.09 2.863 2 1 1 0 531.9537 1513.8779 T190t TMT10 184 (R) LFDTPHtPK (S) LFDT(0.0)PHT(0.99)PK K:TMT10,t:Phosphorylated T WEE1 72280.8 3 5 2739.1 72.21 HUMAN 1 7.9735 -40.3156 RLFVENDSPSDGGTP-p Q08999;S688-p RLFVENDSPSDGGTP 0.76634179505546 0.562503097600281 0.046 -0.056 2.21648114625117 3.36629822812077 0.046 -0.056 0.600277251521255 0.460649047175427 0.556226983392354 -0.793758876770578 Q08999 RBL2 Q08999.S688.p_RBL2 Q08999_S688s _1_1_688_688 Q08999 Q08999 Retinoblastoma-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17748.17748.3 15.71 15.71 3.807 3 1 1 0 652.9698 1876.9238 S688s TMT10 682 (R) LFVENDsPSDGGTPGR (M) LFVENDS(0.99)PS(0.0)DGGT(0.0)PGR s:Phosphorylated S RBL2 129790.7 3 9 408.1 323.79 HUMAN 1 2.2165 -3.3663 RLGAGGGSPEKSPSA-p Q9UNE7;S19-p RLGAGGGSPEKSPSA 0.543328167061294 0.0135098973611704 0.104 -0.590333333333333 4.8902975857874 25.9850119920061 0.104 -0.590333333333333 0.324317393821836 0.0025205702196761 1.08391569247222 -5.29070931745298 Q9UNE7 STUB1 Q9UNE7.S19.p_STUB1 Q9UNE7_S19s _1_1_19_19 Q9UNE7 Q9UNE7 E3 ubiquitin-protein ligase CHIP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14406.14406.2 20.95 20.95 4.827 3 1 1 0 1240.6706 2400.3702 S19s TMT10 13 (R) LGAGGGsPEKSPSAQELK (E) LGAGGGS(0.99)PEKS(0.0)PS(0.0)AQELK K:TMT10,s:Phosphorylated S STUB1 35312 23 1 2394.1 85.43 HUMAN 1 4.8903 -25.985 RLGAPENSGISTLER-p A0A1B0GV68;S20-p RLGAPENSGISTLER 0.16541735067902 0.0201544544723462 0.298 0.348333333333333 15.6392029522507 23.223987841027 0.298 0.348333333333333 0.0272947866994795 0.00475993712308313 2.99921601928521 4.60235885449075 A0A1B0GV68 NotFound A0A1B0GV68.S20.p_NotFound A0A1B0GV68_S20s _1_1_20_20 A0A1B0GV68 Q9Y4F1-2|C9JME2|A0A1B0GV68|Q9Y4F1-3 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17425.17425.3 15.09 15.09 4.075 3 1 1 0 584.9631 1672.9067 S20s TMT10 14 (R) LGAPENsGISTLER (G) LGAPENS(0.99)GIS(0.0)T(0.0)LER s:Phosphorylated S FARP1 88555.5 3 2 147.1 514.5 HUMAN 1 15.6392 23.224 RLGDSSLSRKDSRWG-p Q14152;S884-p RLGDSSLSRKDSRWG 0.113112267835937 0.105569708070363 -0.723666666666667 -0.206333333333333 19.7548389859868 12.899766878302 -0.723666666666667 -0.206333333333333 0.0105807414320567 0.0512888914234223 -3.82653260369528 -2.49166654866006 Q14152 EIF3A Q14152.S884.p_EIF3A Q14152_S884s _1_1_884_884 Q14152 Q14152|Q14152-2 Eukaryotic translation initiation factor 3 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9506.9506.2 9.02 2.63 2.072 3 1 1 0 572.2832 1063.5945 S884s TMT10 878 (R) LGDSSLsR (K) LGDS(0.0)S(0.0)LS(0.99)R s:Phosphorylated S EIF3A 166965.8 2 6 1342.1 151.61 HUMAN 1 -19.7548 -12.8998 RLGEVTGSPSPPPRS-p O94875-12;S344-p RLGEVTGSPSPPPRS 0.821911830828182 0.749569447738948 0.0336666666666667 -0.0383333333333333 1.63936957453906 1.73061373412602 0.0336666666666667 -0.0383333333333333 0.685587739712955 0.671333974979811 0.427369158961865 -0.448232510674467 O94875 SORBS2 O94875.12.S344.p_SORBS2 O94875-12_S344sS346s_2_2_344_346 O94875-12 O94875-10|O94875-12|O94875-4|O94875-3|O94875-5 Isoform 12 of Sorbin and SH3 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15510.15724.3 11.87 11.87 1.188 3 2 2 0 561.597 1522.8427 S344s S346s TMT10 338 (R) LGEVTGsPsPPPR (S) LGEVT(0.0)GS(0.99)PS(0.99)PPPR s:Phosphorylated S SORBS2 81021.6 2 16 962.1 194.05 HUMAN 1 1.6394 -1.7306 RLGGHGPSFPLKGIT-p P13010;S191-p RLGGHGPSFPLKGIT 0.615307213301471 0.739466349441332 -0.0676666666666667 -0.0486666666666667 3.91476882741288 1.80789123695466 -0.0676666666666667 -0.0486666666666667 0.405997273690139 0.659494041858667 -0.900802157033694 -0.465772753292802 P13010 XRCC5 P13010.S191.p_XRCC5 P13010_S191s _1_1_191_191 P13010 P13010 X-ray repair cross-complementing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18866.18866.3 13.31 13.31 99 1 1 1 0 549.9741 1567.9361 S191s TMT10 185 (R) LGGHGPsFPLK (G) LGGHGPS(1.0)FPLK K:TMT10,s:Phosphorylated S XRCC5 83273.6 1 2 1948.1 105.79 HUMAN 1 -3.9148 -1.8079 RLGGPQASLSTKVTA-p Q9NUI1;S226-p RLGGPQASLSTKVTA 0.807434902944981 0.269755113000643 0.0413333333333333 0.120666666666667 1.78467272753579 7.49189085510082 0.0413333333333334 0.120666666666667 0.663029309866688 0.178160291452836 0.460570009564541 1.54641285668282 Q9NUI1 DECR2 Q9NUI1.S226.p_DECR2 Q9NUI1_S226s _1_1_226_226 Q9NUI1 Q9NUI1|Q4VXZ8|Q9NUI1-3 Peroxisomal 2,4-dienoyl-CoA reductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14935.14935.2 13.51 13.51 2.205 3 1 1 0 798.941 1516.9099 S226s TMT10 220 (R) LGGPQAsLSTK (V) LGGPQAS(0.99)LS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S DECR2 31119.3 2 1 4237.1 34.97 HUMAN 1 1.7847 7.4919 RLGKRPHSPEKAFSS-p Q53F19;S500-p RLGKRPHSPEKAFSS 0.0506176118125653 0.00422755426421801 0.527333333333333 0.732666666666667 28.5137230763001 34.9188821297939 0.527333333333334 0.732666666666667 0.0014080811751188 0.00032218979982931 5.99236035422262 8.06439868306222 Q53F19 NCBP3 Q53F19.S500.p_NCBP3 Q53F19_S500s _1_1_500_500 Q53F19 Q53F19|Q53F19-2 Nuclear cap-binding protein subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3089.3089.3 9.04 9.04 99 1 1 1 0 463.5866 1308.7788 S500s TMT10 497 (K) RPHsPEK (A) RPHS(1.0)PEK K:TMT10,s:Phosphorylated S NCBP3 70705.4 3 5 1350.1 150.87 HUMAN 1 28.5137 34.9189 RLGLPLLTDCAQPSR-p P55199;T431-p RLGLPLLTDCAQPSR 0.614617666332898 0.402441533053227 0.0756666666666667 0.175333333333333 3.92434031137337 5.2585695460736 0.0756666666666667 0.175333333333333 0.405103475243481 0.297949763744513 0.902639307919216 1.15099525253146 P55199 ELL P55199.T431.p_ELL P55199_T431t _1_1_431_431 P55199 P55199|U3KQ90 RNA polymerase II elongation factor ELL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20719.20719.4 11.14 11.14 1.102 4 1 1 0 642.8309 2488.3292 T431t TMT10 425 (R) LGLPLLtDCAQPSRPHGSPSR (S) LGLPLLT(0.99)DCAQPS(0.0)RPHGS(0.0)PS(0.0)R C:Carbamidomethylation,t:Phosphorylated T ELL 69005.2 3 3 1646.1 123.88 HUMAN 1 3.9243 5.2586 RLGQDSLTPEQVAWR-p Q86UU0;T514-p RLGQDSLTPEQVAWR 0.158297715435374 0.135124879019501 0.253333333333333 0.167 16.0498483144338 11.4602570990188 0.253333333333333 0.167 0.0248321983493282 0.0714454029690274 3.07776753792575 2.23589130128065 Q86UU0 BCL9L Q86UU0.T514.p_BCL9L Q86UU0_T514t _1_1_514_514 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21415.21415.2 17.15 12.1 2.213 2 1 1 0 954.9771 1828.9755 T514t TMT10 508 (R) LGQDSLtPEQVAWR (K) LGQDS(0.0)LT(0.99)PEQVAWR t:Phosphorylated T BCL9L 157526.3 1 9 139.1 524.37 HUMAN 1 16.0498 11.4603 RLGQMVLSGVDTVLG-p O60664;S187-p RLGQMVLSGVDTVLG 0.945565498713959 0.159210482416507 -0.0133333333333333 0.183666666666667 0.477734150613866 10.497835151619 -0.0133333333333333 0.183666666666667 0.895832027077206 0.0891695314978298 -0.137201561956253 2.06746657540884 O60664 PLIN3 O60664.S187.p_PLIN3 O60664_S187s _1_1_187_187 O60664 O60664|O60664-3|O60664-4 Perilipin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.36736.36736.3 14.02 12.32 2.806 2 1 1 0 685.7147 1975.1662 S187s TMT10 181 (R) LGQMVLsGVDTVLGK (S) LGQMVLS(0.99)GVDT(0.0)VLGK K:TMT10,s:Phosphorylated S PLIN3 47245.3 4 7 1075.1 180.54 HUMAN 1 -0.4777 10.4978 RLGRREKSPALPEKK-p Q86V25;S332-p RLGRREKSPALPEKK 0.307533175710051 0.0118666492276053 -0.266666666666667 -0.535666666666667 9.56948350753474 26.9077312351768 -0.266666666666667 -0.535666666666667 0.110420993223098 0.00203810651139569 -1.90700203054363 -5.53613954436437 Q86V25 VASH2 Q86V25.S332.p_VASH2 Q86V25_S332s _1_1_332_332 Q86V25 Q86V25|Q86V25-5|Q86V25-2|Q86V25-6 Vasohibin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11326.11326.3 11.26 11.26 99 1 1 1 0 589.3407 1686.0405 S332s TMT10 330 (R) EKsPALPEK (K) EKS(1.0)PALPEK K:TMT10,s:Phosphorylated S VASH2 40620.3 1 1 6510.1 11.26 HUMAN 1 -9.5695 -26.9077 RLGSHAGSTRGSLLS-p Q70EL4;S744-p RLGSHAGSTRGSLLS 0.162745792256947 0.483911663708732 0.303333333333333 -0.193 15.7899574277252 4.20842607935556 0.303333333333333 -0.193 0.0263635722892932 0.379452476907068 3.0279629964129 -0.956598322006615 Q70EL4 USP43 Q70EL4.S744.p_USP43 Q70EL4_S744s _1_1_744_744 Q70EL4 Q70EL4|Q70EL4-4|Q70EL4-3|Q70EL4-2 Ubiquitin carboxyl-terminal hydrolase 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3755.3755.3 8.91 8.91 1.177 3 1 1 0 398.8664 1114.6166 S744s TMT10 738 (R) LGSHAGsTR (G) LGS(0.0)HAGS(0.99)T(0.0)R s:Phosphorylated S USP43 124119.2 1 3 817.1 219.69 HUMAN 1 15.79 -4.2084 RLHGGFDSDCSEDGE-p O00178;S44-p RLHGGFDSDCSEDGE 0.826817782780066 0.386460193164008 -0.036 0.0853333333333334 1.59061952191534 5.48908608033112 -0.036 0.0853333333333334 0.693326895746666 0.282547449894099 -0.416104091934128 1.19271720653568 O00178 GTPBP1 O00178.S44.p_GTPBP1 O00178_S44sS47s_2_2_44_47 O00178 O00178|F8WAZ4 GTP-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25141.25894.4 16.94 16.94 10.496 4 2 2 0 878.3812 3350.5735 S44s S47s TMT10 38 (R) LHGGFDsDCsEDGEALNGEPELDLTSK (L) LHGGFDS(0.99)DCS(0.99)EDGEALNGEPELDLT(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GTPBP1 73080.2 9 9 2114.1 97.01 HUMAN 1 -1.5906 5.4891 RLHNGNASPPRVPSP-p O15037;S353-p RLHNGNASPPRVPSP 0.325306077824017 0.239132002688733 -0.142666666666667 0.114333333333333 9.13339350942513 8.18657316372518 -0.142666666666667 0.114333333333333 0.122084533783905 0.151824788090196 -1.83145650401674 1.66697004191814 O15037 KHNYN O15037.S353.p_KHNYN O15037_S353sS359s_2_2_353_359 O15037 O15037 Protein KHNYN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16430.16430.4 8.39 8.39 99 2 2 2 0 832.8803 3168.5747 S353s S359s TMT10 347 (R) LHNGNAsPPRVPsPPPAPEPPWHCGDR (G) LHNGNAS(1.0)PPRVPS(1.0)PPPAPEPPWHCGDR C:Carbamidomethylation,s:Phosphorylated S KHNYN 75274.3 2 2 5049.1 23.52 HUMAN 1 -9.1334 8.1866 RLHSRELSPEARRSL-p Q9P0B6;S42-p RLHSRELSPEARRSL 0.388754166810574 0.113755467588167 -0.145 0.203 7.5909675920249 12.4496735630931 -0.145 0.203 0.174141884849653 0.056889569021058 -1.5641128071196 2.41110115922551 Q9P0B6 CCDC167 Q9P0B6.S42.p_CCDC167 Q9P0B6_S42s _1_1_42_42 Q9P0B6 Q9P0B6 Coiled-coil domain-containing protein 167 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5222.5222.3 9.17 5.07 99 1 1 1 0 422.8849 1186.6742 S42s TMT10 40 (R) ELsPEARR (S) ELS(1.0)PEARR s:Phosphorylated S CCDC167 11516.2 2 1 5552.1 18.25 HUMAN 1 -7.591 12.4497 RLIAHAGSLLNLAKH-p Q9Y2X3;S304-p RLIAHAGSLLNLAKH 0.565301052278164 0.0415389477499685 -0.0986666666666667 0.402666666666667 4.56432864477396 18.5185459632263 -0.0986666666666667 0.402666666666667 0.349596547892729 0.014065183537567 -1.02357740479869 3.56495474765488 Q9Y2X3 NOP58 Q9Y2X3.S304.p_NOP58 Q9Y2X3_S304s _1_1_304_304 Q9Y2X3 Q9Y2X3 Nucleolar protein 58 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28162.28162.3 17.86 14.33 99 1 1 1 0 620.3691 1779.1257 S304s TMT10 298 (R) LIAHAGsLLNLAK (H) LIAHAGS(1.0)LLNLAK K:TMT10,s:Phosphorylated S NOP58 60090.6 2 5 481.1 298.21 HUMAN 1 -4.5643 18.5185 RLIAHAGSLTNLAKY-p O00567;S314-p RLIAHAGSLTNLAKY 0.483726315617236 0.326774532636207 -0.182666666666667 0.133 5.80912609464101 6.43147336351813 -0.182666666666667 0.133 0.262474665265012 0.227432572466933 -1.25048533746494 1.3607347828778 O00567 NOP56 O00567.S314.p_NOP56 O00567_S314s _1_1_314_314 O00567 O00567 Nucleolar protein 56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21259.21259.2 19.08 15.69 2.246 2 1 1 0 924.0314 1767.0893 S314s TMT10 308 (R) LIAHAGsLTNLAK (Y) LIAHAGS(0.99)LT(0.0)NLAK K:TMT10,s:Phosphorylated S NOP56 66448.1 7 3 262.1 396.77 HUMAN 1 -5.8091 6.4315 RLIEDNEYTARQGAK-p J3QRU1;Y431-p RLIEDNEYTARQGAK 0.761476943047114 0.815675569435547 -0.117 0.0336666666666667 2.26851831272432 1.23785695109962 -0.117 0.0336666666666667 0.593127648078691 0.751993877802059 -0.567479091164676 0.332488419873216 J3QRU1 NotFound J3QRU1.Y431.p_NotFound J3QRU1_Y431y _1_1_431_431 J3QRU1 J3QRU1|P07947|P12931-2|P06239-3|P06241|P06241-2|Q573B4 Tyrosine-protein kinase GG20160819_MSz_CCLE_T4D7_pY_Injection_02.13712.13873.2 20.68 11.34 1.159 2 1 1 0 766.8644 1452.7532 Y431y TMT10 425 (R) LIEDNEyTAR (Q) LIEDNEY(0.99)T(0.0)AR y:Phosphorylated Y YES1 61899.4 2 4 4.1 124.38 HUMAN 1 -2.2685 1.2379 RLIHGEDSDSEGEEE-p Q9C0C9;S87-p RLIHGEDSDSEGEEE 0.563005808318766 0.214427967317373 0.0815 -0.123 4.59501120149727 8.79776567249112 0.0815 -0.123 0.347135380541062 0.131893512044155 1.02928979168592 -1.7727337532086 Q9C0C9 UBE2O Q9C0C9.S87.p_UBE2O Q9C0C9_S87sS89s_2_2_87_89 Q9C0C9 Q9C0C9 (E3-independent) E2 ubiquitin-conjugating enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7228.7228.4 24.4 24.4 4.175 5 2 2 0 934.1191 3573.5218 S87s S89s TMT10 81 (R) LIHGEDsDsEGEEEGRGSSGCSEAGGAGHEEGR (A) LIHGEDS(0.99)DS(0.99)EGEEEGRGS(0.0)S(0.0)GCS(0.0)EAGGAGHEEGR C:Carbamidomethylation,s:Phosphorylated S UBE2O 142717.3 3 17 308.1 373.27 HUMAN 2 4.595 -8.7978 RLIIRNLSFKCSEDD-p Q9NW13;S122-p RLIIRNLSFKCSEDD 0.259441883712572 0.00367909740653814 -0.166666666666667 -0.637333333333333 11.1187076034946 36.1441748444374 -0.166666666666667 -0.637333333333334 0.0772910557690367 0.000242986707069626 -2.17691905915362 -8.52511611062354 Q9NW13 RBM28 Q9NW13.S122.p_RBM28 Q9NW13_S122s _1_1_122_122 Q9NW13 Q9NW13 RNA-binding protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18294.18294.3 12.54 4.97 1.108 2 1 1 0 741.7152 2143.1672 S122s TMT10 120 (R) NLsFKCSEDDLK (T) NLS(0.99)FKCS(0.0)EDDLK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RBM28 86249.5 2 1 3296.1 54.56 HUMAN 1 -11.1187 -36.1442 RLIITPETPEPEAQP-p Q96DU7;T336-p RLIITPETPEPEAQP 0.282067524168147 0.043479843297551 0.371666666666667 -0.269333333333333 10.3912242938413 18.2467972475909 0.371666666666667 -0.269333333333333 0.0913855585541441 0.0149733947849363 2.04976908713011 -3.50946269943825 Q96DU7 ITPKC Q96DU7.T336.p_ITPKC Q96DU7_T336t _1_1_336_336 Q96DU7 Q96DU7 Inositol-trisphosphate 3-kinase C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23121.23121.3 15.83 15.83 3.121 3 1 1 0 813.091 2357.2914 T336t TMT10 330 (R) LIITPEtPEPEAQPVGPPSR (V) LIIT(0.0)PET(0.99)PEPEAQPVGPPS(0.0)R t:Phosphorylated T ITPKC 75947.8 1 3 2777.1 71.06 HUMAN 1 10.3912 -18.2468 RLINGVRSPQTRQAG-p Q92615;S451-p RLINGVRSPQTRQAG 0.493565503761746 0.00792052213892768 -0.139333333333333 -0.486333333333333 5.64574194046795 29.9711285247693 -0.139333333333333 -0.486333333333333 0.272537210174699 0.00100667004920243 -1.22118829769877 -6.41319172571057 Q92615 LARP4B Q92615.S451.p_LARP4B Q92615_S451s _1_1_451_451 Q92615 Q92615 La-related protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31464.31464.4 16.25 16.25 1.376 5 1 1 0 838.6956 3271.7749 S451s TMT10 428 (R) GPGLLESPSIFNFTADRLINGVRsPQTR (Q) GPGLLES(0.0)PS(0.0)IFNFT(0.0)ADRLINGVRS(0.99)PQT(0.0)R s:Phosphorylated S LARP4B 80949.9 5 3 332.1 357.69 HUMAN 1 -5.6457 -29.9711 RLIPHKGTMPKEVNL-p Q9UKK3;T333-p RLIPHKGTMPKEVNL 0.133469229088605 0.109503855803623 -0.556333333333333 -0.206333333333333 18.001317489883 12.687623001324 -0.556333333333333 -0.206333333333333 0.0158441246702198 0.0538564471216951 -3.46253192967648 -2.45361996331087 Q9UKK3 PARP4 Q9UKK3.T333.p_PARP4 Q9UKK3_T333t _1_1_333_333 Q9UKK3 Q9UKK3 Poly [ADP-ribose] polymerase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13591.13591.4 12.75 10.42 99 1 1 1 0 473.0317 1809.1388 T333t TMT10 327 (R) LIPHKGtMPK (E) LIPHKGT(1.0)MPK K:TMT10,t:Phosphorylated T PARP4 194702.2 1 3 2490.1 81.31 HUMAN 1 -18.0013 -12.6876 RLISPLASPADGVKS-p Q8WYP5-2;S2261-p RLISPLASPADGVKS 0.0428370985731628 0.0010212605030329 -0.638333333333333 -1.52066666666667 30.5432417087625 51.4924077884798 -0.638333333333333 -1.52066666666667 0.000882420988128237 7.09184477299498e-06 -6.59912393272093 -16.7378465842266 Q8WYP5 AHCTF1 Q8WYP5.2.S2261.p_AHCTF1 Q8WYP5-2_S2261s _1_1_2261_2261 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25017.25017.3 15.12 15.12 6.477 2 1 1 0 602.6786 1726.0515 S2261s TMT10 2255 (R) LISPLAsPADGVK (S) LIS(0.0)PLAS(0.99)PADGVK K:TMT10,s:Phosphorylated S AHCTF1 258049.6 1 39 40.1 829.79 HUMAN 1 -30.5432 -51.4924 RLISQIVSSITASLR-p P68363;S236-p RLISQIVSSITASLR 0.453195332145344 0.805240783460221 -0.169666666666667 0.0746666666666667 6.34130633673706 1.31696879851418 -0.169666666666667 0.0746666666666666 0.232203823346212 0.73841943749411 -1.34514457152786 0.351563678886527 P68363 TUBA1B P68363.S236.p_TUBA1B P68363_S236s _1_1_236_236 P68363 F5H5D3|P68363|Q9BQE3|Q9NY65|P68366|P68366-2|Q9NY65-2|P68363-2|Q9H853 Tubulin alpha-1B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.38185.38185.3 19.44 13.48 1.15 5 1 1 0 599.6748 1717.0421 S236s TMT10 230 (R) LISQIVsSITASLR (F) LIS(0.0)QIVS(0.99)S(0.0)IT(0.0)AS(0.0)LR s:Phosphorylated S TUBA1B 50835.4 2 9 868.1 210.03 HUMAN 1 -6.3413 1.317 RLIVENLSSRCSWQD-p Q13247;S118-p RLIVENLSSRCSWQD 0.278257140485788 0.149143005302023 0.154 0.159666666666667 10.5089709505361 10.8777792603746 0.154 0.159666666666667 0.0889411836710604 0.0817000032789764 2.07029176822642 2.13376108791205 Q13247 SRSF6 Q13247.S118.p_SRSF6 Q13247_S118s _1_1_118_118 Q13247 Q08170|Q13247|Q13247-3|Q13243|Q13243-3|B4DUA4|B4DJK0 Serine/arginine-rich splicing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18459.18459.2 8.29 7.57 1.348 2 1 1 0 670.3623 1259.7521 S118s TMT10 112 (R) LIVENLsSR (C) LIVENLS(0.99)S(0.0)R s:Phosphorylated S SRSF6 39700.2 6 18 743.1 233.79 HUMAN 1 10.509 10.8778 RLKETRISFVEEDVH-p Q8WYP5-2;S1267-p RLKETRISFVEEDVH 0.425998757587894 0.00203690866710184 0.255333333333333 -0.849666666666667 6.82676363133895 41.9362930973725 0.255333333333333 -0.849666666666667 0.207646032223061 6.40281111614074e-05 1.43065371385769 -11.0375153050781 Q8WYP5 AHCTF1 Q8WYP5.2.S1267.p_AHCTF1 Q8WYP5-2_S1267s _1_1_1267_1267 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21803.21803.3 13.95 9.39 99 1 1 1 0 613.3217 1757.9838 S1267s TMT10 1266 (R) IsFVEEDVHPK (W) IS(1.0)FVEEDVHPK K:TMT10,s:Phosphorylated S AHCTF1 258049.6 9 15 40.1 829.79 HUMAN 1 6.8268 -41.9363 RLKEVKLSPDNGKKR-p B2RNG4;S441-p RLKEVKLSPDNGKKR 0.0584327871562607 0.0066063112490667 -0.511 -0.558333333333333 26.9296726268694 31.3345287991561 -0.511 -0.558333333333333 0.00202783557291617 0.000735439784895477 -5.54969887911723 -6.83718223022626 B2RNG4 TRIM6-TRIM34 B2RNG4.S441.p_TRIM6-TRIM34 B2RNG4_S441s _1_1_441_441 B2RNG4 B2RNG4|Q9BYJ4|Q9BYJ4-2 TRIM6-TRIM34 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11390.11390.2 11.67 11.67 99 1 1 1 0 927.5203 1774.0678 S441s TMT10 437 (K) EVKLsPDNGK (K) EVKLS(1.0)PDNGK K:TMT10,s:Phosphorylated S TRIM6-TRIM34 99895.6 4 1 6443.1 11.67 HUMAN 1 -26.9297 -31.3345 RLKGQEDSLASAVDA-p J3KR35;S162-p RLKGQEDSLASAVDA 0.960348290562728 0.152786719067864 0.00766666666666666 -0.185666666666667 0.338664360178311 10.7312511148864 0.00766666666666666 -0.185666666666667 0.924982601600177 0.0845035372429944 0.0986301588508063 -2.10816687126554 J3KR35 CCDC12 J3KR35.S162.p_CCDC12 J3KR35_S162s _1_1_162_162 J3KR35 J3KR35|Q8WUD4 Coiled-coil domain containing 12, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20963.20963.4 13.18 13.18 2.17 3 1 1 0 682.8665 2648.471 S162s TMT10 156 (R) LKGQEDsLASAVDAATEQK (T) LKGQEDS(0.99)LAS(0.0)AVDAAT(0.0)EQK K:TMT10,s:Phosphorylated S CCDC12 20557.9 2 1 3177.1 58.58 HUMAN 1 0.3387 -10.7313 RLKKAWSSQDEVSTN-p A1L390;S433-p RLKKAWSSQDEVSTN 0.86020729522646 0.557377336369019 -0.0283333333333333 -0.0623333333333333 1.27685209776834 3.42180514251009 -0.0283333333333334 -0.0623333333333333 0.745271974613437 0.454798983922607 -0.341951293458919 -0.804735077264674 A1L390 PLEKHG3 A1L390.S433.p_PLEKHG3 A1L390_S433s _1_1_433_433 A1L390 A1L390|A1L390-3 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11824.11824.3 10.88 10.88 1.118 4 1 1 0 715.6955 2065.1078 S433s TMT10 429 (K) KAWSsQDEVSTNVR (Q) KAWS(0.0)S(0.99)QDEVS(0.0)T(0.0)NVR K:TMT10,s:Phosphorylated S PLEKHG3 135322.7 4 3 284.1 386.18 HUMAN 1 -1.2769 -3.4218 RLKLEDDSEESDAEF-p Q03468;S486-p RLKLEDDSEESDAEF 0.31256981829013 0.0227741938685918 -0.201333333333333 0.438666666666667 9.44928137467122 22.4247150823852 -0.201333333333333 0.438666666666667 0.113519864099378 0.00572174490759868 -1.88616900560097 4.41494713789691 Q03468 ERCC6 Q03468.S486.p_ERCC6 Q03468_S486sS489s_2_2_486_489 Q03468 Q03468 DNA excision repair protein ERCC-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35860.35860.5 13.87 13.87 99 2 2 2 0 814.4043 3908.0663 S486s S489s TMT10 480 (R) LKLEDDsEEsDAEFDEGFKVPGFLFK (K) LKLEDDS(1.0)EES(1.0)DAEFDEGFKVPGFLFK K:TMT10,s:Phosphorylated S ERCC6 169554.2 8 14 403.1 327.23 HUMAN 1 -9.4493 22.4247 RLKMNIASPGTVHKR-p Q9NRH2;S518-p RLKMNIASPGTVHKR 0.101218422745456 0.0288397521665792 -0.470333333333333 -0.281666666666667 21.0281783605036 20.8522904596168 -0.470333333333333 -0.281666666666667 0.00789191072817558 0.00821809115301125 -4.10316588970129 -4.06028794118907 Q9NRH2 SNRK Q9NRH2.S518.p_SNRK Q9NRH2_S518s _1_1_518_518 Q9NRH2 Q9NRH2|E7EUC4 SNF-related serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13571.13571.3 15.1 15.1 3.381 2 1 1 0 564.9686 1612.9245 S518s TMT10 514 (K) MNIAsPGTVHK (R) MNIAS(0.99)PGT(0.0)VHK K:TMT10,s:Phosphorylated S SNRK 85187.6 2 4 3054.1 62.03 HUMAN 1 -21.0282 -20.8523 RLKRKTQSFYMSSPG-p Q08AE8;S735-p RLKRKTQSFYMSSPG 0.252651211577592 0.102315023930303 0.293666666666667 -0.269 11.3939480129651 13.0772576160942 0.293666666666667 -0.269 0.0725446180888847 0.0492350335721876 2.22527535515953 -2.52360324247649 Q08AE8 SPIRE1 Q08AE8.S735.p_SPIRE1 Q08AE8_S735s _1_1_735_735 Q08AE8 Q08AE8|Q08AE8-2|Q08AE8-5 Protein spire homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15056.15056.3 13.85 13.85 1.159 8 1 1 0 959.4383 2796.3373 S735s TMT10 732 (R) KTQsFYMSSPGPSEYCPSER (T) KT(0.0)QS(0.99)FY(0.0)MS(0.0)S(0.0)PGPS(0.0)EY(0.0)CPS(0.0)ER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SPIRE1 86683.2 1 6 1694.1 120.62 HUMAN 1 11.3939 -13.0773 RLKRRPVSAIFTESI-p Q9BY89;S244-p RLKRRPVSAIFTESI 0.510762279292918 0.211231947206593 -0.203333333333333 -0.143666666666667 5.3928773311102 8.88362048848452 -0.203333333333333 -0.143666666666667 0.288876535458944 0.129311738689934 -1.1755925105283 -1.78758317720765 Q9BY89 KIAA1671 Q9BY89.S244.p_KIAA1671 Q9BY89_S244s _1_1_244_244 Q9BY89 Q9BY89 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18612.18612.5 17.38 17.38 2.235 4 1 1 0 707.0002 3451.0152 S244s TMT10 240 (K) RRPVsAIFTESIQPQKPGPGAAATVGK (V) RRPVS(0.99)AIFT(0.0)ES(0.0)IQPQKPGPGAAAT(0.0)VGK K:TMT10,s:Phosphorylated S KIAA1671 197734.4 1 4 105.1 590.35 HUMAN 1 -5.3929 -8.8836 RLKSTCIYGGAPKGP-p A0A1W2PQ51;Y279-p RLKSTCIYGGAPKGP 0.0626849711829956 0.00756903109707508 -0.490333333333333 -0.576666666666667 26.1356475689405 30.3066431571973 -0.490333333333333 -0.576666666666667 0.00243464274754451 0.000931827845708845 -5.337271942113 -6.51549896002782 A0A1W2PQ51 NotFound A0A1W2PQ51.Y279.p_NotFound A0A1W2PQ51_Y279y _1_1_279_279 A0A1W2PQ51 A0A1W2PQ51|Q92841|A0A1X7SBZ2|Q92841-2|Q92841-3|Q92841-1|P17844|J3KTA4|P17844-2 Probable ATP-dependent RNA helicase DDX17 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11951.11988.2 19.06 11.99 6.77 3 1 1 0 796.402 1511.8292 Y279y TMT10 275 (K) STCIyGGAPK (G) S(0.0)T(0.0)CIY(0.99)GGAPK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y DDX17 81140.9 2 1 183.1 19.06 HUMAN 1 -26.1356 -30.3066 RLLDLYASGERRAYG-p Q9BRK3-2;S228-p RLLDLYASGERRAYG 0.356019622503244 0.875252582774429 -0.137 0.0166666666666667 8.33636919451863 0.814038492380965 -0.137 0.0166666666666667 0.14667735862203 0.829079450258341 -1.69346721244137 0.22653683720494 Q9BRK3 MXRA8 Q9BRK3.2.S228.p_MXRA8 Q9BRK3-2_S228s _1_1_228_228 Q9BRK3-2 Q9BRK3-2|Q9BRK3-3|Q9BRK3-4 Isoform 2 of Matrix remodeling-associated protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19103.19103.3 7.63 7.63 7.628 2 1 1 0 534.6139 1521.8587 S228s TMT10 222 (R) LLDLYAsGERR (A) LLDLY(0.0)AS(0.99)GERR s:Phosphorylated S MXRA8 50018.5 2 1 4167.1 36.31 HUMAN 1 -8.3364 0.814 RLLEDSDSEDEAAPS-p Q9BW85;S213-p RLLEDSDSEDEAAPS 0.752880589938391 0.167055830818824 0.044 0.154666666666667 2.35230618907635 10.2216908869017 0.044 0.154666666666667 0.58179419157549 0.0950234756182815 0.585482646596058 2.01941630099043 Q9BW85 CCDC94 Q9BW85.S213.p_CCDC94 Q9BW85_S211sS213s_2_2_211_213 Q9BW85 Q9BW85 Coiled-coil domain-containing protein 94 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27143.27813.5 27.94 27.94 10.575 4 2 2 0 946.4891 4568.4815 S211s S213s TMT10 206 (R) RLLEDsDsEDEAAPSPLQPALRPNPTAILDEAPKPK (R) RLLEDS(0.99)DS(0.99)EDEAAPS(0.0)PLQPALRPNPT(0.0)AILDEAPKPK K:TMT10,s:Phosphorylated S CCDC94 37370.4 25 3 2597.1 77.21 HUMAN 1 2.3523 10.2217 RLLEVQGSRPGKNVQ-p P62136;S22-p RLLEVQGSRPGKNVQ 0.991883667014353 0.403135824316543 0.00166666666666665 -0.0856666666666667 0.0745329965550493 5.24791112503441 0.00166666666666665 -0.0856666666666667 0.982984569139075 0.2986818877318 0.0223305942994749 -1.14905908161008 P62136 PPP1CA P62136.S22.p_PPP1CA P62136_S22s _1_1_22_22 P62136 P62136 Serine/threonine-protein phosphatase PP1-alpha catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14377.14377.3 11.06 5.17 99 1 1 1 0 574.6622 1642.0052 S22s TMT10 16 (R) LLEVQGsRPGK (N) LLEVQGS(1.0)RPGK K:TMT10,s:Phosphorylated S PPP1CA 38253.1 1 5 1839.1 111.78 HUMAN 1 0.0745 -5.2479 RLLEVRGSKPGKNVQ-p P36873-2;S22-p RLLEVRGSKPGKNVQ 0.203968533214827 0.010153816812367 -0.418333333333333 -0.537 13.3750443259797 27.9984354378837 -0.418333333333333 -0.537 0.0459722296381644 0.0015854642590204 -2.57887265016832 -5.83706547879682 P36873 PPP1CC P36873.2.S22.p_PPP1CC P36873-2_S22s _1_1_22_22 P36873-2 P36873-2|F8VYE8|F8VR82|A0A087WYY5 Isoform Gamma-2 of Serine/threonine-protein phosphatase PP1-gamma catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13964.13964.4 10.29 10.29 99 1 1 1 0 488.5481 1871.2045 S22s TMT10 16 (R) LLEVRGsKPGK (N) LLEVRGS(1.0)KPGK K:TMT10,s:Phosphorylated S PPP1CC 39259.3 1 1 1839.3 111.78 HUMAN 1 -13.375 -27.9984 RLLFKKISLEDIQAF-p Q8WXX5;S109-p RLLFKKISLEDIQAF 0.921627477279005 0.528572271571601 -0.0166666666666667 -0.0693333333333333 0.694755092343086 3.72299093078469 -0.0166666666666667 -0.0693333333333333 0.852166565462596 0.424327234533946 -0.195454971275304 -0.86365534525013 Q8WXX5 DNAJC9 Q8WXX5.S109.p_DNAJC9 Q8WXX5_S109s _1_1_109_109 Q8WXX5 Q8WXX5 DnaJ homolog subfamily C member 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25992.25992.3 12.89 7.71 99 1 1 1 0 730.0794 2108.257 S109s TMT10 107 (K) KIsLEDIQAFEK (T) KIS(1.0)LEDIQAFEK K:TMT10,s:Phosphorylated S DNAJC9 30080.4 2 1 5004.1 23.98 HUMAN 1 -0.6948 -3.723 RLLGDSDSEEEQKEA-p Q9BW71;S291-p RLLGDSDSEEEQKEA 0.16127524660131 0.016864644809907 -0.260333333333333 0.665666666666667 15.8718967081225 24.4678482239214 -0.260333333333333 0.665666666666667 0.0258708280348013 0.00357449898110018 -3.04363156760571 4.90429742808076 Q9BW71 HIRIP3 Q9BW71.S291.p_HIRIP3 Q9BW71_S291s _1_1_291_291 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10779.10779.3 14.19 7.8 3.872 2 1 1 0 682.0043 1964.0337 S291s TMT10 284 (K) RLLGDSDsEEEQK (E) RLLGDS(0.0)DS(0.99)EEEQK K:TMT10,s:Phosphorylated S HIRIP3 62298.3 2 11 178.1 481.23 HUMAN 1 -15.8719 24.4678 RLLGGTRTPINDAS_-p Q8N357;T365-p RLLGGTRTPINDAS_ 0.137301954068809 0.188115797671727 0.266666666666667 0.152 17.6815520736115 9.54419860224491 0.266666666666667 0.152 0.0170547278136148 0.111065746455066 3.39810192201646 1.90188900859188 Q8N357 SLC35F6 Q8N357.T365.p_SLC35F6 Q8N357_T365t _1_1_365_365 Q8N357 Q8N357 Solute carrier family 35 member F6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16265.16265.2 11.18 11.18 1.102 3 1 1 0 812.4189 1543.8641 T365t TMT10 359 (R) LLGGTRtPINDAS (-) LLGGT(0.0)RT(0.99)PINDAS(0.0) t:Phosphorylated T SLC35F6 40498.7 6 1 5061.1 23.4 HUMAN 1 17.6816 9.5442 RLLKHWVSPLKDAMR-p Q96JF6;S50-p RLLKHWVSPLKDAMR 0.120260347431319 0.00594624852197438 -0.342666666666667 -1.07 19.1179024859579 32.1555753383448 -0.342666666666667 -1.07 0.0122520779556019 0.000608754894671313 -3.69214782301753 -7.1033953203556 Q96JF6 ZNF594 Q96JF6.S50.p_ZNF594 Q96JF6_S50s _1_1_50_50 Q96JF6 Q96JF6 Zinc finger protein 594 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16126.16126.3 11.47 5.2 99 1 1 1 0 468.9314 1324.8142 S50s TMT10 47 (K) HWVsPLK (D) HWVS(1.0)PLK K:TMT10,s:Phosphorylated S ZNF594 96758 1 1 6477.1 11.47 HUMAN 1 -19.1179 -32.1556 RLLLAEDSEEEVDFL-p Q14676;S168-p RLLLAEDSEEEVDFL 0.642910629713767 0.115747127817729 0.0646666666666667 0.166666666666667 3.58590629581549 12.3523044902695 0.0646666666666667 0.166666666666667 0.437934712400731 0.0581794419152911 0.837098591163361 2.39374814635252 Q14676 MDC1 Q14676.S168.p_MDC1 Q14676_S168s _1_1_168_168 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31371.31986.2 22.37 19.82 10.167 2 1 1 0 1152.0472 2223.123 S168s TMT10 162 (R) LLLAEDsEEEVDFLSER (R) LLLAEDS(0.99)EEEVDFLS(0.0)ER s:Phosphorylated S MDC1 227803.2 48 4 6.1 1662.62 HUMAN 1 3.5859 12.3523 RLLLERPSPIRDRRG-p Q96T37;S700-p RLLLERPSPIRDRRG 0.156450973477083 0.066548451994915 0.254666666666667 0.346333333333333 16.1640517471001 15.6539780995645 0.254666666666667 0.346333333333333 0.0241877140280661 0.0272020847931273 3.0997536259937 2.99996568546997 Q96T37 RBM15 Q96T37.S700.p_RBM15 Q96T37_S700s _1_1_700_700 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14609.14609.4 12.03 12.03 99 1 1 1 0 444.2545 1694.0275 S700s TMT10 694 (R) LLLERPsPIRDR (R) LLLERPS(1.0)PIRDR s:Phosphorylated S RBM15 107414.9 11 22 55.1 724.11 HUMAN 1 16.1641 15.654 RLLNLQDSDSEECTS-p Q52LR7;S538-p RLLNLQDSDSEECTS 0.648592155019236 0.0269995627488565 -0.077 0.311666666666667 3.5238839304405 21.2904372650578 -0.077 0.311666666666667 0.444233807906817 0.00742944331523504 -0.824950406078554 4.15731449698814 Q52LR7 EPC2 Q52LR7.S538.p_EPC2 Q52LR7_S538s _1_1_538_538 Q52LR7 Q52LR7 Enhancer of polycomb homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18656.18656.2 17.86 17.86 2.857 4 1 1 0 1038.4597 1995.9491 S538s TMT10 532 (R) LLNLQDsDSEECTSR (K) LLNLQDS(0.99)DS(0.0)EECT(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S EPC2 91949.1 5 3 1676.1 121.76 HUMAN 1 -3.5239 21.2904 RLLPDPGSPRLAQNA-p A6ND36;S760-p RLLPDPGSPRLAQNA 0.702360190260937 0.0127182007681037 -0.0543333333333333 -0.412 2.88517161027113 26.4233686519989 -0.0543333333333333 -0.412 0.514615471723004 0.00227857398587899 -0.696991271080686 -5.4062888346133 A6ND36 FAM83G A6ND36.S760.p_FAM83G A6ND36_S760s _1_1_760_760 A6ND36 A6ND36 Protein FAM83G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17230.17230.2 11 11 99 1 1 1 0 630.8312 1180.6887 S760s TMT10 754 (R) LLPDPGsPR (L) LLPDPGS(1.0)PR s:Phosphorylated S FAM83G 91118.6 2 6 1966.1 104.97 HUMAN 1 -2.8852 -26.4234 RLLPLTKSPVESTTE-p P53992;S957-p RLLPLTKSPVESTTE 0.86446812533848 0.757293418847766 0.0293333333333333 0.0353333333333334 1.23230204653812 1.66917244102708 0.0293333333333333 0.0353333333333334 0.752956341527341 0.680899093354113 0.331175065589432 0.43417667842103 P53992 SEC24C P53992.S957.p_SEC24C P53992_S957s _1_1_957_957 P53992 P53992|G5EA31|P53992-2 Protein transport protein Sec24C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23400.23400.3 8.55 8.55 1.113 5 1 1 0 858.4837 2493.4692 S957s TMT10 951 (R) LLPLTKsPVESTTEPPAVR (A) LLPLT(0.0)KS(0.99)PVES(0.0)T(0.0)T(0.0)EPPAVR K:TMT10,s:Phosphorylated S SEC24C 119863.1 2 4 2432.1 83.59 HUMAN 1 1.2323 1.6692 RLLRRSRSGDVLAKN-p P85299-5;S263-p RLLRRSRSGDVLAKN 0.47756957700383 0.181091614774775 0.119666666666667 -0.191 5.90423525825653 9.76058366801833 0.119666666666667 -0.191 0.256789034372649 0.105667548826714 1.2674850652852 -1.93938086623232 P85299 PRR5 P85299.5.S263.p_PRR5 P85299-5_S263s _1_1_263_263 P85299-5 P85299-5|P85299-3|P85299-4|P85299-2 Isoform 5 of Proline-rich protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8178.8178.2 10.03 10.03 10.026 2 1 1 0 735.9063 1390.8418 S263s TMT10 261 (R) SRsGDVLAK (N) S(0.0)RS(0.99)GDVLAK K:TMT10,s:Phosphorylated S PRR5 45456.6 1 3 2028.1 101.7 HUMAN 1 5.9042 -9.7606 RLLSVKGSPKVDEKV-p Q96T58;S1287-p RLLSVKGSPKVDEKV 0.0482466396076474 0.00196368390122345 0.491333333333333 0.928666666666667 29.1843380287365 42.2972885301465 0.491333333333333 0.928666666666667 0.00120660799082042 5.89211408207627e-05 6.18774448341051 11.2145121236945 Q96T58 SPEN Q96T58.S1287.p_SPEN Q96T58_S1287s _1_1_1287_1287 Q96T58 Q96T58 Msx2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16538.16538.4 11.18 7.09 2.074 2 1 1 0 599.8646 2316.4672 S1287s TMT10 1281 (R) LLSVKGsPKVDEK (V) LLS(0.0)VKGS(0.99)PKVDEK K:TMT10,s:Phosphorylated S SPEN 403267.9 1 8 2199.1 93.72 HUMAN 1 29.1843 42.2973 RLLVTDMSDAEQYRS-p O14929;S343-p RLLVTDMSDAEQYRS 0.468720713206654 0.0221420189415373 0.105 -0.342333333333333 6.07499784454166 22.6022121067753 0.105 -0.342333333333333 0.246888133024287 0.00549261032967225 1.29791282705361 -4.45613587859223 O14929 HAT1 O14929.S343.p_HAT1 O14929_S343s _1_1_343_343 O14929 O14929|O14929-2 Histone acetyltransferase type B catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23002.23002.3 8.1 8.1 2.628 3 1 1 0 617.2922 1769.8941 S343s TMT10 337 (R) LLVTDMsDAEQYR (S) LLVT(0.0)DMS(0.99)DAEQY(0.0)R s:Phosphorylated S HAT1 49911.1 1 1 5086.1 23.14 HUMAN 1 6.075 -22.6022 RLLVTRQSLQKAVQQ-p O14907;S113-p RLLVTRQSLQKAVQQ 0.0608497647854506 0.261223101034105 -0.497333333333333 -0.130333333333333 26.5601452658595 7.68184220116282 -0.497333333333333 -0.130333333333333 0.00220793087936555 0.170535885218778 -5.45007883086768 -1.57943535218974 O14907 TAX1BP3 O14907.S113.p_TAX1BP3 O14907_S113s _1_1_113_113 O14907 O14907|A0A087X282 Tax1-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15702.15702.3 12.29 12.29 3.267 2 1 1 0 575.3467 1644.0572 S113s TMT10 107 (R) LLVTRQsLQK (A) LLVT(0.0)RQS(0.99)LQK K:TMT10,s:Phosphorylated S TAX1BP3 13734.5 1 3 2411.1 84.6 HUMAN 1 -26.5601 -7.6818 RLMTGDTYTAHAGAK-p P42684;Y439-p RLMTGDTYTAHAGAK 0.384541584575696 0.524838223211786 0.154666666666667 0.0833333333333334 7.68496995986083 3.76144163587778 0.154666666666667 0.0833333333333334 0.170413110674565 0.420586991808488 1.58045884842079 0.871103971269959 P42684 ABL2 P42684.Y439.p_ABL2 P42684_Y439y _1_1_439_439 P42684 P42684|P42684-3|P42684-6|P00519-2|P42684-2|P42684-5|P42684-10|P42684-7|P42684-4|P42684-8 Abelson tyrosine-protein kinase 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.12996.13033.3 21.56 21.56 2.463 4 1 1 0 658.9943 1895.0097 Y439y TMT10 433 (R) LMTGDTyTAHAGAK (F) LMT(0.0)GDT(0.0)Y(0.99)T(0.0)AHAGAK K:TMT10,y:Phosphorylated Y ABL2 129367.6 3 2 95.1 29.29 HUMAN 1 7.685 3.7614 RLNPHRESDGGAGDL-p O75688-2;S376-p RLNPHRESDGGAGDL 0.552676502068556 0.739045218529465 0.0793333333333333 0.0343333333333333 4.75426074364757 1.81184398077539 0.0793333333333333 0.0343333333333333 0.334636974933404 0.65889407451649 1.05882643719375 0.466665884642175 O75688 PPM1B O75688.2.S376.p_PPM1B O75688-2_S376s _1_1_376_376 O75688-2 O75688-2 Isoform Beta-2 of Protein phosphatase 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17949.17962.3 14.37 14.37 99 1 1 1 0 758.6725 2194.0362 S376s TMT10 370 (R) LNPHREsDGGAGDLEDPW (-) LNPHRES(1.0)DGGAGDLEDPW s:Phosphorylated S PPM1B 43340.7 1 2 4424.2 31.61 HUMAN 1 4.7543 1.8118 RLNYSDESPEAGKML-p Q9GZR1;S919-p RLNYSDESPEAGKML 0.265419473261086 0.0390406979875848 -0.261333333333333 0.405333333333333 10.9250587318192 18.912063850373 -0.261333333333333 0.405333333333333 0.0808153999967107 0.0128467601226782 -2.14298535216064 3.64608215854024 Q9GZR1 SENP6 Q9GZR1.S919.p_SENP6 Q9GZR1_S919s _1_1_919_919 Q9GZR1 Q9GZR1|Q9GZR1-2 Sentrin-specific protease 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12952.12952.2 14.34 14.34 3.639 3 1 1 0 924.4414 1767.9165 S919s TMT10 913 (R) LNYSDEsPEAGK (M) LNY(0.0)S(0.0)DES(0.99)PEAGK K:TMT10,s:Phosphorylated S SENP6 127627.2 4 2 1568.1 131.02 HUMAN 1 -10.9251 18.9121 RLPALSHSEGEEDED-p P55201-2;S462-p RLPALSHSEGEEDED 0.147571881565505 0.211983976313256 0.417333333333333 0.129333333333333 16.8648229072622 8.86259401023019 0.417333333333333 0.129333333333333 0.0205834282210209 0.129939322781553 3.23605770622864 1.78394645007562 P55201 BRPF1 P55201.2.S462.p_BRPF1 P55201-2_S460sS462s_2_2_460_462 P55201-2 P55201-2|P55201-3|P55201-4 Isoform 2 of Peregrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15958.15958.4 11.11 11.11 11.111 4 2 2 0 1006.2021 3861.8506 S460s S462s TMT10 455 (R) RLPALsHsEGEEDEDEEEDEGKGWSSEK (V) RLPALS(0.99)HS(0.99)EGEEDEDEEEDEGKGWS(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S BRPF1 139837.6 4 14 723.1 237.03 HUMAN 1 16.8648 8.8626 RLPARELSAPARLYH-p Q9H1K1;S29-p RLPARELSAPARLYH 0.529480199246688 0.395493367077361 0.083 -0.102666666666667 5.10905229106572 5.35574156774843 0.083 -0.102666666666667 0.30838608309154 0.291357259311808 1.12400546720423 -1.1686177971205 Q9H1K1 ISCU Q9H1K1.S29.p_ISCU Q9H1K1_S29s _1_1_29_29 Q9H1K1 Q9H1K1|B3KQ30|B4DNC9|F5H5N2|F5H672 Iron-sulfur cluster assembly enzyme ISCU, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10683.10683.3 11.23 11.23 99 1 1 1 0 497.2744 1409.8426 S29s TMT10 23 (R) LPARELsAPAR (L) LPARELS(1.0)APAR s:Phosphorylated S ISCU 18226.9 6 1 5212.1 21.74 HUMAN 1 5.1091 -5.3557 RLPEASQSPLVLKQA-p Q13330;S522-p RLPEASQSPLVLKQA 0.959787547516884 0.970148459727511 -0.015 -0.00799999999999996 0.34464870342607 0.186912778161595 -0.015 -0.00799999999999997 0.923708903310757 0.957874743311632 -0.100311378566036 -0.055306943828744 Q13330 MTA1 Q13330.S522.p_MTA1 Q13330_S522s _1_1_522_522 Q13330 Q13330|E7ESY4|Q13330-3 Metastasis-associated protein MTA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19135.19135.3 16.48 11.1 1.947 3 1 1 0 836.7829 2428.3634 S522s TMT10 510 (K) AECTARLPEASQsPLVLK (Q) AECT(0.0)ARLPEAS(0.0)QS(0.99)PLVLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTA1 81469.4 9 5 1200.1 167 HUMAN 1 -0.3446 -0.1869 RLPILQLTVQYRMHP-p Q7Z333-4;T2255-p RLPILQLTVQYRMHP 0.672055923167882 0.279482640255134 0.0873333333333333 0.264333333333333 3.23229993125068 7.29464629867795 0.0873333333333333 0.264333333333333 0.475083565155151 0.186438401261033 0.767212708479124 1.51206175721251 Q7Z333 SETX Q7Z333.4.T2255.p_SETX Q7Z333-4_T2255tY2258y_2_2_2255_2258 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23246.23246.3 7.88 5.29 99 2 2 2 0 501.9155 1343.8045 T2255t Y2258y Hydrogen 2249 (R) LPILQLtVQyR (M) LPILQLT(1.0)VQY(1.0)R t:Phosphorylated T,y:Phosphorylated Y SETX 310728.6 3 22 192.1 463.82 HUMAN 1 3.2323 7.2946 RLPKAAKTPLKIHPL-p O94776;T505-p RLPKAAKTPLKIHPL 0.292579056536687 0.000952253650599092 0.165666666666667 -1.58033333333333 10.0687881117874 53.5051864890042 0.165666666666667 -1.58033333333333 0.0984285729987091 4.46150466165185e-06 1.99366388651218 -18.2553859356409 O94776 MTA2 O94776.T505.p_MTA2 O94776_T505t _1_1_505_505 O94776 O94776|O94776-2 Metastasis-associated protein MTA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8464.8464.2 8.22 3.46 99 1 1 1 0 748.4646 1415.9553 T505t TMT10 502 (K) AAKtPLK (I) AAKT(1.0)PLK K:TMT10,t:Phosphorylated T MTA2 75763.5 2 5 2100.1 97.64 HUMAN 1 10.0688 -53.5052 RLPLNFLSGEKFKEC-p Q9BXJ9;S302-p RLPLNFLSGEKFKEC 0.180325945197864 0.469999841758836 -0.374333333333333 0.100333333333333 14.6769047907752 4.37051921672439 -0.374333333333333 0.100333333333333 0.0340650884500004 0.365551085880848 -2.81807118487818 0.987145810854202 Q9BXJ9 NAA15 Q9BXJ9.S302.p_NAA15 Q9BXJ9_S302s _1_1_302_302 Q9BXJ9 Q9BXJ9|A0A0B4J1W3|Q9BXJ9-4 N-alpha-acetyltransferase 15, NatA auxiliary subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25045.25045.3 9.68 9.68 99 1 1 1 0 604.6766 1732.0522 S302s TMT10 295 (R) RLPLNFLsGEK (F) RLPLNFLS(1.0)GEK K:TMT10,s:Phosphorylated S NAA15 102525.8 1 1 2350.1 87.07 HUMAN 1 -14.6769 4.3705 RLPLVPESPRRMMTR-p Q86WB0;S321-p RLPLVPESPRRMMTR 0.817865312187549 0.0248288235074772 -0.0383333333333333 -0.47 1.67925831663473 21.8362180285845 -0.0383333333333333 -0.47 0.679319636175752 0.00655206499899758 -0.43653867947237 -4.28009402929053 Q86WB0 ZC3HC1 Q86WB0.S321.p_ZC3HC1 Q86WB0_S321s _1_1_321_321 Q86WB0 Q86WB0|Q86WB0-2|C9J0I9|Q86WB0-3 Nuclear-interacting partner of ALK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16391.16391.3 10.59 8.56 99 1 1 1 0 491.6106 1392.8525 S321s TMT10 315 (R) LPLVPEsPRR (M) LPLVPES(1.0)PRR s:Phosphorylated S ZC3HC1 56401.6 7 4 624.1 258.98 HUMAN 1 -1.6793 -21.8362 RLPPKVESLESLYFT-p Q14980;S1769-p RLPPKVESLESLYFT 0.891125219480611 0.286492318870489 0.026 -0.13 0.977264719211215 7.16176860816966 0.026 -0.13 0.798497439925744 0.192230873409168 0.268165758492758 -1.48888038519881 Q14980 NUMA1 Q14980.S1769.p_NUMA1 Q14980_S1769s _1_1_1769_1769 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31751.31960.3 14.6 8.91 1.107 4 1 1 0 899.1676 2615.5213 S1769s TMT10 1763 (R) LPPKVEsLESLYFTPIPAR (S) LPPKVES(0.99)LES(0.0)LY(0.0)FT(0.0)PIPAR K:TMT10,s:Phosphorylated S NUMA1 239339.3 3 19 31.1 900.97 HUMAN 1 0.9773 -7.1618 RLPRRKMSFDIIDKS-p M0R2Z9;S329-p RLPRRKMSFDIIDKS 0.633204865850603 0.0310889125388133 -0.0983333333333333 0.427333333333333 3.69752139886079 20.3680017918434 -0.0983333333333334 0.427333333333333 0.426823045325458 0.00918755222599354 -0.858850151785831 3.95458870285631 M0R2Z9 SUGP2 M0R2Z9.S329.p_SUGP2 M0R2Z9_S329s _1_1_329_329 M0R2Z9 M0R2Z9|Q8IX01|Q8IX01-3|Q8IX01-4|M0R3F6 SURP and G-patch domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21378.21378.3 9.8 7.69 99 1 1 1 0 545.6245 1554.8966 S329s Hydrogen 327 (R) KMsFDIIDK (S) KMS(1.0)FDIIDK K:TMT10-Lys-Only,s:Phosphorylated S SUGP2 122455.2 3 6 963.1 194.03 HUMAN 1 -3.6975 20.368 RLPSLSGSDGIPYRT-p P21709;S910-p RLPSLSGSDGIPYRT 0.105885561453204 0.0705656450953409 -0.332666666666667 -0.262666666666667 20.5392653466424 15.3097136636397 -0.332666666666667 -0.262666666666667 0.00883229295015077 0.0294461576999036 -3.99565024499998 -2.93477882546303 P21709 EPHA1 P21709.S910.p_EPHA1 P21709_S910s _1_1_910_910 P21709 P21709 Ephrin type-A receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23722.23722.3 13.04 13.04 1.114 4 1 1 0 557.6168 1590.8689 S910s TMT10 904 (R) LPSLSGsDGIPYR (T) LPS(0.0)LS(0.0)GS(0.99)DGIPY(0.0)R s:Phosphorylated S EPHA1 109779.8 4 2 4516.1 30.43 HUMAN 1 -20.5393 -15.3097 RLPSSPASPSPKGTP-p Q9H4G0;S544-p RLPSSPASPSPKGTP 0.598806533260307 0.98477856307107 0.08 -0.00299999999999998 4.1154904953576 0.0985410305312358 0.08 -0.00299999999999998 0.387659963438663 0.977565569309344 0.939142321655205 -0.029441797739614 Q9H4G0 EPB41L1 Q9H4G0.S544.p_EPB41L1 Q9H4G0_S544s _1_1_544_544 Q9H4G0 Q9H4G0|A0A0C4DH22 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13555.13555.2 11.15 7.22 1.208 4 1 1 0 803.4341 1525.899 S544s TMT10 538 (R) LPSSPAsPSPK (G) LPS(0.0)S(0.0)PAS(0.99)PS(0.0)PK K:TMT10,s:Phosphorylated S EPB41L1 99071.6 2 12 174.1 483.37 HUMAN 1 4.1155 -0.0985 RLPVSRETKSFENVS-p Q52LW3;T169-p RLPVSRETKSFENVS 0.463034255771599 0.00326766235965598 -0.128666666666667 -0.617 6.16992443384368 37.2540291306652 -0.128666666666667 -0.617 0.241550286322647 0.00018819023602126 -1.31477826614316 -8.96225885483226 Q52LW3 ARHGAP29 Q52LW3.T169.p_ARHGAP29 Q52LW3_T169t _1_1_169_169 Q52LW3 Q52LW3|F8VWZ8|Q52LW3-2 Rho GTPase-activating protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16335.16335.4 14.28 14.28 1.133 7 1 1 0 714.6112 2775.4503 T169t TMT10 168 (R) EtKSFENVSVESVDSSSEK (G) ET(0.99)KS(0.0)FENVS(0.0)VES(0.0)VDS(0.0)S(0.0)S(0.0)EK K:TMT10,t:Phosphorylated T ARHGAP29 143601.5 2 3 517.1 284.75 HUMAN 1 -6.1699 -37.254 RLPYKVLSVPESTPF-p P61960;S22-p RLPYKVLSVPESTPF 0.817365787868304 0.0181153584903393 -0.0386666666666667 -0.534666666666667 1.68343491764951 23.986587916389 -0.0386666666666667 -0.534666666666667 0.678666649930265 0.00399338523964074 -0.437496330192156 -4.78594499860594 P61960 UFM1 P61960.S22.p_UFM1 P61960_S22s _1_1_22_22 P61960 P61960 Ubiquitin-fold modifier 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.33534.33534.3 12.88 13.59 1.104 4 1 1 0 709.402 2046.2251 S22s TMT10 20 (K) VLsVPESTPFTAVLK (F) VLS(0.99)VPES(0.0)T(0.0)PFT(0.0)AVLK K:TMT10,s:Phosphorylated S UFM1 9174.5 1 1 6245.1 12.88 HUMAN 1 -1.6834 -23.9866 RLQDRSLTQPITTEE-p O95425-2;T342-p RLQDRSLTQPITTEE 0.336940767668124 0.0191130460952602 0.133 0.388333333333333 8.80353502791204 23.634079061255 0.133 0.388333333333333 0.13171841533651 0.00433103899407765 1.77435449807516 4.70048999738509 O95425 SVIL O95425.2.T342.p_SVIL O95425-2_T342t _1_1_342_342 O95425-2 O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.35016.35016.4 20.84 20.84 1.168 6 1 1 0 769.4192 2994.6876 T342t TMT10 340 (R) SLtQPITTEEVVIAATLQASAHQK (A) S(0.0)LT(0.99)QPIT(0.0)T(0.0)EEVVIAAT(0.0)LQAS(0.0)AHQK K:TMT10,t:Phosphorylated T SVIL 202384.1 2 11 406.2 324.74 HUMAN 1 8.8035 23.6341 RLQDSFASETNLDFR-p Q92621;S1942-p RLQDSFASETNLDFR 0.86832082258041 0.75769420805602 -0.0263333333333333 -0.0303333333333333 1.19704318603611 1.66406128448438 -0.0263333333333333 -0.0303333333333333 0.759094214447064 0.681700906569691 -0.32259961016104 -0.433002912034922 Q92621 NUP205 Q92621.S1942.p_NUP205 Q92621_S1942s _1_1_1942_1942 Q92621 Q92621 Nuclear pore complex protein Nup205 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24028.24028.3 15.76 15.76 1.22 3 1 1 0 651.3066 1871.9337 S1942s TMT10 1936 (R) LQDSFAsETNLDFR (S) LQDS(0.0)FAS(0.99)ET(0.0)NLDFR s:Phosphorylated S NUP205 230313.6 3 6 2077.1 98.86 HUMAN 1 -1.197 -1.6641 RLQEGSLSSSKASQD-p Q9Y618;S1583-p RLQEGSLSSSKASQD 0.4574607801757 0.0212672691812805 -0.135666666666667 -0.418333333333333 6.25929982562023 22.8698310903286 -0.135666666666667 -0.418333333333333 0.236630116443247 0.00516436454587256 -1.33062712373827 -4.51869895020439 Q9Y618 NCOR2 Q9Y618.S1583.p_NCOR2 Q9Y618_S1583s _1_1_1583_1583 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12434.12434.3 9.5 9.5 1.35 4 1 1 0 525.2802 1493.8575 S1583s TMT10 1577 (R) LQEGSLsSSK (A) LQEGS(0.0)LS(0.99)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S NCOR2 275540.8 1 27 16.1 1053.89 HUMAN 1 -6.2593 -22.8698 RLQITPDSNGEQFSS-p Q96PU5;S321-p RLQITPDSNGEQFSS 0.574777890570195 0.421002827196796 0.095 -0.0853333333333333 4.42209629211429 5.00067826596514 0.095 -0.0853333333333333 0.361235456134709 0.316178382524334 0.997001642117136 -1.10395924978174 Q96PU5 NEDD4L Q96PU5.S321.p_NEDD4L Q96PU5_S321s_1_1_321_321 Q96PU5 A0A1B0GVY1|Q96PU5|Q96PU5-7|Q96PU5-5|Q96PU5-6|Q96PU5-2|Q96PU5-3|Q96PU5-4|Q96PU5-9 E3 ubiquitin-protein ligase NEDD4-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22585.22585.3 14.62 14.62 5.652 4 1 1 0 833.7537 2418.2939 S321s N322n TMT10 314 (R) RLQITPDsnGEQFSSLIQR (E) RLQIT(0.0)PDS(0.99)N(1.0)GEQFS(0.0)S(0.0)LIQR s:Phosphorylated S,n:Deamidated NEDD4L 112272 6 6 495.1 293.21 HUMAN 1 4.4221 -5.0007 RLQPERGSPKKCEAE-p Q9UKV3;S729-p RLQPERGSPKKCEAE 0.527013800866447 0.0254138205318732 -0.112666666666667 0.303666666666667 5.1489212093069 21.7043682453004 -0.112666666666667 0.303666666666667 0.305568005212761 0.00675403295669992 -1.13127997049293 4.25023448600878 Q9UKV3 ACIN1 Q9UKV3.S729.p_ACIN1 Q9UKV3_S729s _1_1_729_729 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9938.9938.5 27.81 18.11 12.127 8 1 1 0 1020.5075 5018.5369 S729s TMT10 723 (R) LQPERGsPKKCEAEEAEPPAATQPQTSETQTSHLPESER (I) LQPERGS(0.99)PKKCEAEEAEPPAAT(0.0)QPQT(0.0)S(0.0)ET(0.0)QT(0.0)S(0.0)HLPES(0.0)ER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ACIN1 152258.2 18 27 32.2 899.18 HUMAN 1 -5.1489 21.7044 RLQQLSVSATHLADK-p Q2KHM9;S672-p RLQQLSVSATHLADK 0.687993217534669 0.322706764666212 0.057 0.143333333333333 3.05059252055473 6.4941827067357 0.057 0.143333333333333 0.49538259970955 0.224172187287888 0.730669608327482 1.37179646517743 Q2KHM9 KIAA0753 Q2KHM9.S672.p_KIAA0753 Q2KHM9_S672s _1_1_672_672 Q2KHM9 Q2KHM9 Protein moonraker HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.34353.34353.4 11.9 11.9 1.163 3 1 1 0 740.9001 2880.6195 S672s TMT10 666 (R) LQQLSVsATHLADKVEEAVLDR (L) LQQLS(0.0)VS(0.99)AT(0.0)HLADKVEEAVLDR K:TMT10,s:Phosphorylated S KIAA0753 110317.7 1 3 2251.1 91.27 HUMAN 1 3.0506 6.4942 RLQSWEETWSLIPEK-p Q7Z736;T80-p RLQSWEETWSLIPEK 0.611292719322086 0.0781842354520125 -0.0746666666666667 -0.257666666666667 3.96103556754246 14.6883281489791 -0.0746666666666667 -0.257666666666667 0.40169501595932 0.0339756039198433 -0.909674174314779 -2.81840624308196 Q7Z736 PLEKHH3 Q7Z736.T80.p_PLEKHH3 Q7Z736_T80tS82s_2_2_80_82 Q7Z736 Q7Z736|X6R3U4|Q7Z736-2|Q7Z736-3 Pleckstrin homology domain-containing family H member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33536.33536.3 11.49 9.46 4.397 3 2 2 0 788.7192 2204.2003 T80t S82s TMT10 74 (R) LQSWEEtWsLIPEK (G) LQS(0.0)WEET(0.99)WS(0.99)LIPEK K:TMT10,t:Phosphorylated T,s:Phosphorylated S PLEKHH3 86342.8 1 2 5915.1 15.4 HUMAN 1 -3.961 -14.6883 RLRAESPSPPRLLAA-p P50219;S79-p RLRAESPSPPRLLAA 0.527344543785721 0.911451390145283 -0.222 -0.0136666666666667 5.14094000303953 0.56315814187506 -0.222 -0.0136666666666667 0.306130076271812 0.878383533649403 -1.12982447735309 -0.160385493506581 P50219 MNX1 P50219.S79.p_MNX1 P50219_S77sS79s_2_2_77_79 P50219 P50219 Motor neuron and pancreas homeobox protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21441.21441.5 11.69 11.69 99 2 2 2 0 583.9178 2755.6169 S77s S79s TMT10 73 (R) LRAEsPsPPRLLAAHCALLPK (P) LRAES(1.0)PS(1.0)PPRLLAAHCALLPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MNX1 40796.5 2 3 3467.1 50.26 HUMAN 1 -5.1409 -0.5632 RLRDQTRSPKLSHSP-p Q5T5P2;S121-p RLRDQTRSPKLSHSP 0.399942889360242 0.0120021009436103 0.125333333333333 0.655333333333333 7.34487416336461 26.8311649122879 0.125333333333333 0.655333333333334 0.184294588747309 0.00207435703603203 1.52125674369878 5.51546140101082 Q5T5P2 KIAA1217 Q5T5P2.S121.p_KIAA1217 Q5T5P2_S121s _1_1_121_121 Q5T5P2 Q5T5P2|Q5T5P2-10|Q5T5P2-7|Q5T5P2-2|Q5T5P2-9 Sickle tail protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4342.4342.4 8.25 3.2 1.832 2 1 1 0 410.4829 1558.9429 S121s TMT10 115 (R) LRDQTRsPK (L) LRDQT(0.0)RS(0.99)PK K:TMT10,s:Phosphorylated S KIAA1217 214739.6 1 2 303.1 376.04 HUMAN 1 7.3449 26.8312 RLRECELSPGVNRDL-p Q9BXP5;S493-p RLRECELSPGVNRDL 0.434135403741661 0.0703565929597372 0.107 0.247666666666667 6.6763332040195 15.3273658110234 0.107 0.247666666666667 0.214964467674305 0.0293267150145544 1.40422940735773 2.93810860065096 Q9BXP5 SRRT Q9BXP5.S493.p_SRRT Q9BXP5_S493s _1_1_493_493 Q9BXP5 Q9BXP5|Q9BXP5-3|Q9BXP5-2|Q9BXP5-4|Q9BXP5-5 Serrate RNA effector molecule homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9650.9650.3 10.78 6.57 99 1 1 1 0 580.2896 1658.8846 S493s TMT10 487 (R) LRECELsPGVNR (D) LRECELS(1.0)PGVNR C:Carbamidomethylation,s:Phosphorylated S SRRT 101121.1 5 10 321.1 364.45 HUMAN 1 6.6763 15.3274 RLRFKAFSGEGQKLG-p Q14CS0;S216-p RLRFKAFSGEGQKLG 0.299604684368704 0.0189239531474383 -0.166 -0.384333333333333 9.8443129580744 23.7036604535318 -0.166 -0.384333333333333 0.103649856268368 0.00426220127487354 -1.9546745697448 -4.71727637546559 Q14CS0 UBXN2B Q14CS0.S216.p_UBXN2B Q14CS0_S216s _1_1_216_216 Q14CS0 Q14CS0 UBX domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9465.9465.2 10.2 10.2 99 1 1 1 0 681.348 1281.7203 S216s TMT10 214 (K) AFsGEGQK (L) AFS(1.0)GEGQK K:TMT10,s:Phosphorylated S UBXN2B 37190 2 5 2111.1 97.2 HUMAN 1 -9.8443 -23.7037 RLRGKPWSPCKFGNS-p O43151-4;S1514-p RLRGKPWSPCKFGNS 0.0884809517257935 0.000952253650599092 -0.539666666666667 -1.33466666666667 22.4490333814584 54.8355387959207 -0.539666666666667 -1.33466666666667 0.00568979555751602 3.28432495669676e-06 -4.42537408819907 -19.3309255714258 O43151 NotFound O43151.4.S1514.p_NotFound O43151-4_S1514s _1_1_1514_1514 O43151-4 O43151-4|J3KNF3|O43151-2 Isoform 4 of Methylcytosine dioxygenase TET3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13003.13003.3 10.32 10.32 99 1 1 1 0 576.3163 1646.9655 S1514s TMT10 1510 (R) GKPWsPCK (F) GKPWS(1.0)PCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TET3 195926.1 1 10 1535.1 133.43 HUMAN 1 -22.449 -54.8355 RLRGRKISPPSYARR-p A0A0A0MQS2;S285-p RLRGRKISPPSYARR 0.915417923105005 0.862895201571829 0.0176666666666667 -0.0276666666666667 0.751517662867492 0.903543282303019 0.0176666666666667 -0.0276666666666667 0.841101163452131 0.812167621853279 0.210332716282771 -0.249480873843686 A0A0A0MQS2 CLASRP A0A0A0MQS2.S285.p_CLASRP A0A0A0MQS2_S285s _1_1_285_285 A0A0A0MQS2 Q8N2M8|A0A0A0MQS2|F5H0Q6|Q8N2M8-4|Q8N2M8-3 CLK4-associating serine/arginine-rich protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7308.7723.3 11.91 11.91 11.915 3 1 1 0 443.2376 1247.7309 S285s Hydrogen 283 (R) KIsPPSYAR (R) KIS(0.99)PPS(0.0)Y(0.0)AR K:TMT10-Lys-Only,s:Phosphorylated S CLASRP 77332.1 11 4 1177.1 169.72 HUMAN 1 0.7515 -0.9035 RLRLDTGSPEPETRG-p Q9Y2F5;S1854-p RLRLDTGSPEPETRG 0.803071219855168 0.4685597414732 -0.0353333333333333 0.11 1.83423779882538 4.38942731754417 -0.0353333333333333 0.11 0.655505319089591 0.363963026950654 -0.471771637640776 0.990694687634796 Q9Y2F5 ICE1 Q9Y2F5.S1854.p_ICE1 Q9Y2F5_S1854s _1_1_1854_1854 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9151.9151.2 13.67 13.67 2.178 3 1 1 0 755.8542 1430.7325 S1854s TMT10 1850 (R) LDTGsPEPETR (G) LDT(0.0)GS(0.99)PEPET(0.0)R s:Phosphorylated S ICE1 250910.2 6 19 216.1 433.09 HUMAN 1 -1.8342 4.3894 RLRNRAQSYDIQAWK-p Q8WWQ0;S1315-p RLRNRAQSYDIQAWK 0.0732853965819104 0.0734611468879375 -0.419333333333333 0.204666666666667 24.4165283301347 15.0561636927307 -0.419333333333333 0.204666666666667 0.00361698882511013 0.0312164584866623 -4.89750308262841 2.88709876058332 Q8WWQ0 PHIP Q8WWQ0.S1315.p_PHIP Q8WWQ0_S1315s _1_1_1315_1315 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16314.16314.2 17.18 17.18 4.947 2 1 1 0 938.4918 1796.0107 S1315s Hydrogen 1313 (R) AQsYDIQAWKK (Q) AQS(0.99)Y(0.0)DIQAWKK K:TMT10-Lys-Only,s:Phosphorylated S PHIP 208454.1 10 12 108.1 577.05 HUMAN 1 -24.4165 15.0562 RLRPRSRSLSPGRAT-p O60307;S155-p RLRPRSRSLSPGRAT 0.531734774301321 0.0737462611660232 -0.115333333333333 0.299666666666667 5.0760403137036 15.0311708093254 -0.115333333333333 0.299666666666667 0.310739146566567 0.0313966216198772 -1.11797481417675 2.88241363903113 O60307 MAST3 O60307.S155.p_MAST3 O60307_S155sS157s_2_2_155_157 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24136.24136.3 8.9 8.9 7.501 5 2 2 0 919.0669 2595.2443 S155s S157s Hydrogen 155 (R) sLsPGRATGTFDNEIVMMNHVYR (E) S(0.99)LS(0.99)PGRAT(0.0)GT(0.0)FDNEIVMMNHVY(0.0)R s:Phosphorylated S MAST3 143933.5 2 34 121.3 549.41 HUMAN 1 -5.076 15.0312 RLRRGPSSPRRPYQD-p A0A0A0MR66;S58-p RLRRGPSSPRRPYQD 0.340727355898959 0.261389929090717 0.140666666666667 0.155666666666667 8.69419052878697 7.67713198203176 0.140666666666667 0.155666666666667 0.135076857095256 0.17072094332472 1.75542670472304 1.57861711366567 A0A0A0MR66 RBM10 A0A0A0MR66.S58.p_RBM10 A0A0A0MR66_S58s _1_1_58_58 A0A0A0MR66 A0A0A0MR66 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5489.5489.5 13.69 13.69 1.44 4 1 1 0 487.4325 2353.1669 S58s TMT10 54 (R) RGPSsPRRPYQDMEYER (R) RGPS(0.0)S(0.99)PRRPY(0.0)QDMEY(0.0)ER s:Phosphorylated S RBM10 110706.4 10 3 270.1 394.36 HUMAN 1 8.6942 7.6771 RLRRLGDSSGPALKR-p Q9UHD8;S22-p RLRRLGDSSGPALKR 0.878163316796656 0.160541721028053 -0.0273333333333333 -0.160666666666667 1.10986075025599 10.4494271347579 -0.0273333333333333 -0.160666666666667 0.774486630108826 0.0901690069080944 -0.301213267865463 -2.05903590309702 Q9UHD8 SEPT9 Q9UHD8.S22.p_SEPT9 Q9UHD8_S22s _1_1_22_22 Q9UHD8 Q9UHD8 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16308.16308.2 13.38 13.38 1.11 2 1 1 0 741.9023 1402.8306 S22s TMT10 19 (R) LGDsSGPALK (R) LGDS(0.99)S(0.0)GPALK K:TMT10,s:Phosphorylated S SEPT9 65685.6 38 2 110.1 572.91 HUMAN 1 -1.1099 -10.4494 RLRRLNHSVAKETAR-p O95295;S112-p RLRRLNHSVAKETAR 0.0986992178204749 0.0189613448383213 -0.371333333333333 -0.41 21.2858145632934 23.6860484849942 -0.371333333333333 -0.41 0.0074373555468781 0.00427952089810949 -4.16049606595237 -4.713023754006 O95295 SNAPIN O95295.S112.p_SNAPIN O95295_S112s _1_1_112_112 O95295 O95295 SNARE-associated protein Snapin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7491.7491.3 8.32 8.32 99 1 1 1 0 436.248 1226.7621 S112s TMT10 109 (R) LNHsVAK (E) LNHS(1.0)VAK K:TMT10,s:Phosphorylated S SNAPIN 14930.8 2 2 3118.1 60.29 HUMAN 1 -21.2858 -23.686 RLRRPGRSPGAAPSS-p Q86SI9-2;S161-p RLRRPGRSPGAAPSS 0.163253188438932 0.698386791144986 0.331333333333333 0.0413333333333333 15.7742078123722 2.14316994743212 0.331333333333333 0.0413333333333333 0.0264593529031974 0.610496256523385 3.02495487778954 0.540215276069869 Q86SI9 C5orf38 Q86SI9.2.S161.p_C5orf38 Q86SI9-2_S161s _1_1_161_161 Q86SI9-2 Q86SI9-2 Isoform 2 of Protein CEI HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3319.3319.3 9.85 4.41 7.656 4 1 1 0 597.6458 1710.9561 S161s TMT10 157 (R) RPGRsPGAAPSSVSR (G) RPGRS(0.99)PGAAPS(0.0)S(0.0)VS(0.0)R s:Phosphorylated S C5orf38 24546.6 1 2 5191.1 22.01 HUMAN 1 15.7742 2.1432 RLRRQLESGGFEARL-p Q8IYI6;S19-p RLRRQLESGGFEARL 0.0562746082957609 0.117271774476799 -0.599666666666667 -0.183 27.2522138583655 12.2732351402585 -0.599666666666667 -0.183 0.00188268912574034 0.0592483807960524 -5.63775441157195 -2.37967543281597 Q8IYI6 EXOC8 Q8IYI6.S19.p_EXOC8 Q8IYI6_S19s _1_1_19_19 Q8IYI6 Q8IYI6 Exocyst complex component 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11617.11617.2 14.23 9.39 99 1 1 1 0 701.8324 1322.6902 S19s TMT10 16 (R) QLEsGGFEAR (L) QLES(1.0)GGFEAR s:Phosphorylated S EXOC8 82482.3 6 1 1770.1 116.15 HUMAN 1 -27.2522 -12.2732 RLRRRKDSAQDDQAK-p Q13045;S436-p RLRRRKDSAQDDQAK 0.441027182521617 0.265721509234561 -0.167333333333333 0.211 6.54744986255593 7.5781685327344 -0.167333333333333 0.211 0.221439460016586 0.174655854045139 -1.3815401544233 1.56141852700602 Q13045 FLII Q13045.S436.p_FLII Q13045_S436s _1_1_436_436 Q13045 Q13045|Q13045-3|Q13045-2|J3KS54 Protein flightless-1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3607.3607.3 9.16 9.16 99 1 1 1 0 677.0291 1949.1019 S436s TMT10 433 (R) RKDsAQDDQAK (Q) RKDS(1.0)AQDDQAK K:TMT10,s:Phosphorylated S FLII 146231.9 2 3 2583.1 77.55 HUMAN 1 -6.5474 7.5782 RLRRVSLSEIGFGKL-p Q00536-2;S229-p RLRRVSLSEIGFGKL 0.467536736396759 0.0497121111153576 0.124333333333333 0.311666666666667 6.09708389375374 17.4311003062028 0.124333333333333 0.311666666666667 0.24563577037889 0.018067163276475 1.3018398594962 3.34540162351562 Q00536 CDK16 Q00536.2.S229.p_CDK16 Q00536-2_S229s _1_1_229_229 Q00536-2 Q00536-2|Q00536-3|A0A087WZU2 Isoform 2 of Cyclin-dependent kinase 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22982.22982.3 9.63 9.63 1.914 2 1 1 0 577.6596 1650.9943 S229s TMT10 225 (R) RVSLsEIGFGK (L) RVS(0.0)LS(0.99)EIGFGK K:TMT10,s:Phosphorylated S CDK16 63855.9 1 9 672.1 248.68 HUMAN 1 6.0971 17.4311 RLSDRLGSPVDNLED-p Q5VUA4;S173-p RLSDRLGSPVDNLED 0.293316872942695 0.107098583239332 0.15 0.273 10.0502147003235 12.8176671370263 0.15 0.273 0.0988504225184289 0.0522676875526356 1.99043584089197 2.47692658350725 Q5VUA4 ZNF318 Q5VUA4.S173.p_ZNF318 Q5VUA4_S173s _1_1_173_173 Q5VUA4 Q5VUA4|Q5VUA4-2 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24692.24692.2 27.92 27.92 15.955 4 1 1 0 1403.1025 2725.2257 S173s Hydrogen 171 (R) LGsPVDNLEDMDRDDLTDDSVFTR (S) LGS(0.99)PVDNLEDMDRDDLT(0.0)DDS(0.0)VFT(0.0)R s:Phosphorylated S ZNF318 252762.4 10 6 37.1 870.88 HUMAN 1 10.0502 12.8177 RLSERALSLEENGVG-p Q8NF50;S451-p RLSERALSLEENGVG 0.544047599257806 0.437491801027725 -0.0893333333333333 0.0733333333333334 4.88128957749406 4.78288790411487 -0.0893333333333333 0.0733333333333334 0.324990781531708 0.332438420032678 -1.08225823117095 1.06390955201452 Q8NF50 DOCK8 Q8NF50.S451.p_DOCK8 Q8NF50_S451s _1_1_451_451 Q8NF50 Q8NF50|Q8NF50-2|Q8NF50-3|Q8NF50-4|E9PDJ4 Dedicator of cytokinesis protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21657.21657.3 16.11 16.11 7.718 2 1 1 0 668.3467 1923.0588 S451s TMT10 449 (R) ALsLEENGVGSNFK (T) ALS(0.99)LEENGVGS(0.0)NFK K:TMT10,s:Phosphorylated S DOCK8 241035.1 3 1 3624.1 46.67 HUMAN 1 -4.8813 4.7829 RLSESQLSFRRSPTK-p Q96PK6;S623-p RLSESQLSFRRSPTK 0.164616537021326 0.157941666947255 -0.3 0.182333333333333 15.6893047316264 10.543570366009 -0.3 0.182333333333333 0.0269817135205976 0.0882354212451598 -3.00875829216304 2.07543485397699 Q96PK6 RBM14 Q96PK6.S623.p_RBM14 Q96PK6_S623sS627s_2_2_623_627 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14291.14291.4 7.46 7.46 4.458 5 2 2 0 564.2911 2094.2072 S623s S627s TMT10 617 (R) LSESQLsFRRsPTK (S) LS(0.0)ES(0.0)QLS(0.99)FRRS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S RBM14 69661.6 1 22 151.1 510.8 HUMAN 1 -15.6893 10.5436 RLSESSASPQPKRRQ-p Q8N5Y2;S367-p RLSESSASPQPKRRQ 0.789473812042836 0.00417215414210897 0.0453333333333333 -0.67 1.98097445869493 35.0167076889397 0.0453333333333333 -0.67 0.633727501170038 0.000315013547216076 0.504584563661455 -8.10036622451857 Q8N5Y2 MSL3 Q8N5Y2.S367.p_MSL3 Q8N5Y2_S367s _1_1_367_367 Q8N5Y2 Q8N5Y2|Q8N5Y2-3|Q8N5Y2-2|Q8N5Y2-5|Q8N5Y2-6|Q8N5Y2-4 Male-specific lethal 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9630.9630.2 13.12 12.22 2.195 4 1 1 0 834.9349 1588.8947 S367s TMT10 361 (R) LSESSAsPQPK (R) LS(0.0)ES(0.0)S(0.0)AS(0.99)PQPK K:TMT10,s:Phosphorylated S MSL3 60279.1 7 3 1755.1 117.41 HUMAN 1 1.981 -35.0167 RLSLDIQSPPNIGLR-p Q9NSI6-2;S701-p RLSLDIQSPPNIGLR 0.679261720290048 0.0108096196580659 -0.0593333333333334 -0.548666666666667 3.14463327721439 27.5563801900602 -0.0593333333333334 -0.548666666666667 0.484771045468318 0.00175534295666791 -0.749638922577243 -5.71365158257075 Q9NSI6 BRWD1 Q9NSI6.2.S701.p_BRWD1 Q9NSI6-2_S701s _1_1_701_701 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28734.28734.3 16.37 16.37 16.369 2 1 1 0 611.3354 1752.0217 S701s TMT10 695 (R) LSLDIQsPPNIGLR (R) LS(0.0)LDIQS(0.99)PPNIGLR s:Phosphorylated S BRWD1 259915.1 2 6 208.1 444.81 HUMAN 1 -3.1446 -27.5564 RLSLFPASPRARPKE-p Q53GA4;S42-p RLSLFPASPRARPKE 0.131133770128844 0.00741055972021653 -0.277 -0.456333333333333 18.2390062801631 30.4591722788702 -0.277 -0.456333333333333 0.0150002802132237 0.000899669032962228 -3.51079803317305 -6.5624413250709 Q53GA4 PHLDA2 Q53GA4.S42.p_PHLDA2 Q53GA4_S42s _1_1_42_42 Q53GA4 Q53GA4 Pleckstrin homology-like domain family A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23753.23753.3 10.56 10.56 4.622 4 1 1 0 675.6971 1945.1068 S42s TMT10 29 (R) GVLTSDRLSLFPAsPR (A) GVLT(0.0)S(0.0)DRLS(0.0)LFPAS(0.99)PR s:Phosphorylated S PHLDA2 17263.3 3 1 2681.1 74.17 HUMAN 1 -18.239 -30.4592 RLSLGGISPAGQETV-p Q5HYI7;S249-p RLSLGGISPAGQETV 0.660198012756113 0.031189407960935 0.06 0.276 3.37789005714614 20.3449173437566 0.06 0.276 0.459421160263597 0.00923651767473 0.796174336356788 3.94959004201943 Q5HYI7 MTX3 Q5HYI7.S249.p_MTX3 Q5HYI7_S249s _1_1_249_249 Q5HYI7 Q5HYI7|Q5HYI7-5 Metaxin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25134.25134.2 16.7 16.7 2.603 3 1 1 0 1268.6787 2456.3761 S249s TMT10 243 (R) LSLGGIsPAGQETVDANLQK (L) LS(0.0)LGGIS(0.99)PAGQET(0.0)VDANLQK K:TMT10,s:Phosphorylated S MTX3 35320.9 5 1 3123.1 60.2 HUMAN 1 3.3779 20.3449 RLSLGPLSPEKLEEI-p Q6PGN9-2;S70-p RLSLGPLSPEKLEEI 0.934528785503059 0.0200510267309114 -0.0186666666666667 -0.710666666666667 0.578603257141058 23.2713589729733 -0.0186666666666667 -0.710666666666667 0.875265225703348 0.00470829973539663 -0.164556845975185 -4.61362481893681 Q6PGN9 PSRC1 Q6PGN9.2.S70.p_PSRC1 Q6PGN9-2_S70s _1_1_70_70 Q6PGN9-2 Q6PGN9|Q6PGN9-2|Q6PGN9-3 Isoform A of Proline/serine-rich coiled-coil protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36519.36519.3 14.58 14.58 3.023 2 1 1 0 921.1656 2681.5126 S70s TMT10 64 (R) LSLGPLsPEKLEEILDEANR (L) LS(0.0)LGPLS(0.99)PEKLEEILDEANR K:TMT10,s:Phosphorylated S PSRC1 35745.9 1 1 2605.1 76.95 HUMAN 1 -0.5786 -23.2714 RLSLVIRSPSLLQSG-p Q9BQG0-2;S1308-p RLSLVIRSPSLLQSG 0.662891847562873 0.00480740028593783 0.063 -0.808666666666667 3.34093798521413 33.8538004202802 0.063 -0.808666666666667 0.463346835706672 0.000411737058906323 0.788849329548776 -7.68164010515151 Q9BQG0 MYBBP1A Q9BQG0.2.S1308.p_MYBBP1A Q9BQG0-2_S1308s _1_1_1308_1308 Q9BQG0-2 Q9BQG0-2 Isoform 2 of Myb-binding protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25950.25950.3 15.57 15.57 2.638 4 1 1 0 736.4354 2127.3265 S1308s TMT10 1302 (R) LSLVIRsPSLLQSGAK (K) LS(0.0)LVIRS(0.99)PS(0.0)LLQS(0.0)GAK K:TMT10,s:Phosphorylated S MYBBP1A 150334.3 3 13 297.1 378.74 HUMAN 1 3.3409 -33.8538 RLSQKAPSLEDGSDA-p O75387;S267-p RLSQKAPSLEDGSDA 0.798971679519919 0.108767509896276 0.0363333333333333 -0.187 1.87823216144592 12.7294377759399 0.0363333333333333 -0.187 0.648898520342451 0.0533403943825262 0.481663568524258 -2.46110860161211 O75387 SLC43A1 O75387.S267.p_SLC43A1 O75387_S267s _1_1_267_267 O75387 O75387-2 Large neutral amino acids transporter small subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20418.20418.4 17.53 17.53 2.261 4 1 1 0 729.8604 2836.4551 S267s TMT10 261 (R) LSQKAPsLEDGSDAFMSPQDVR (G) LS(0.0)QKAPS(0.99)LEDGS(0.0)DAFMS(0.0)PQDVR K:TMT10,s:Phosphorylated S SLC43A1 62331.6 2 1 5640.1 17.53 HUMAN 1 1.8782 -12.7294 RLSSFTSYENPT___-p Q13882;Y447-p RLSSFTSYENPT___ 0.459152430542572 0.91142024325533 -0.107 0.0206666666666667 6.23388872862223 0.563566251777958 -0.107 0.0206666666666667 0.238018726462385 0.878300995143641 -1.32612390646718 0.160495453934122 Q13882 PTK6 Q13882.Y447.p_PTK6 Q13882_Y447y _1_1_447_447 Q13882 Q13882 Protein-tyrosine kinase 6 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.24573.24929.2 20.04 15.68 3.265 6 1 1 0 777.8483 1474.7263 Y447y TMT10 441 (R) LSSFTSyENPT (-) LS(0.0)S(0.0)FT(0.0)S(0.0)Y(0.99)ENPT(0.0) y:Phosphorylated Y PTK6 52403.8 2 3 33.1 58.07 HUMAN 1 -6.2339 0.5636 RLSSGLVSPAPSFYS-p Q15911;S2896-p RLSSGLVSPAPSFYS 0.826776350969775 0.146819010551792 -0.0323333333333333 0.247333333333333 1.59253240264325 10.9717967750823 -0.0323333333333333 0.247333333333333 0.693021582260843 0.0799503413820884 -0.416547347545591 2.15020257475815 Q15911 ZFHX3 Q15911.S2896.p_ZFHX3 Q15911_S2896s _1_1_2896_2896 Q15911 Q15911|Q15911-2 Zinc finger homeobox protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24482.24482.3 13.34 13.34 3.286 6 1 1 0 693.3733 1998.1312 S2896s TMT10 2890 (R) LSSGLVsPAPSFYSK (E) LS(0.0)S(0.0)GLVS(0.99)PAPS(0.0)FY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ZFHX3 409090.1 2 13 529.1 281.73 HUMAN 1 -1.5925 10.9718 RLSSLRASTSKSESS-p P62753;S240-p RLSSLRASTSKSESS 0.300478673172259 0.00101974401157986 -0.382 -2.312 9.81101807909452 51.8472381296564 -0.382 -2.312 0.104447534317409 6.5354603929959e-06 -1.94889577511023 -16.9961853621275 P62753 RPS6 P62753.S240.p_RPS6 P62753_S240s _1_1_240_240 P62753 P62753|A2A3R5 40S ribosomal protein S6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9942.9942.4 12.8 12.8 1.133 8 1 1 0 616.5915 2383.376 S240s TMT10 234 (R) LSSLRAsTSKSESSQK (-) LS(0.0)S(0.0)LRAS(0.99)T(0.0)S(0.0)KS(0.0)ES(0.0)S(0.0)QK K:TMT10,s:Phosphorylated S RPS6 28851.3 6 5 2203.1 93.5 HUMAN 1 -9.811 -51.8472 RLSSLSLSPANHENQ-p Q9Y4F3;S1571-p RLSSLSLSPANHENQ 0.141585108983502 0.00829912119026097 0.25 0.468666666666667 17.3455211127605 29.5873053180857 0.25 0.468666666666667 0.0184267137237391 0.00109968795496238 3.33100102990272 6.29773444332382 Q9Y4F3 KIAA0430 Q9Y4F3.S1571.p_KIAA0430 Q9Y4F3_S1571s _1_1_1571_1571 Q9Y4F3 Q9Y4F3|Q9Y4F3-5|Q9Y4F3-4|Q9Y4F3-3|G8JLP4 Meiosis regulator and mRNA stability factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15277.15277.3 17.54 17.54 1.496 5 1 1 0 821.059 2381.1894 S1571s TMT10 1565 (R) LSSLSLsPANHENQPSEGER (I) LS(0.0)S(0.0)LS(0.0)LS(0.99)PANHENQPS(0.0)EGER s:Phosphorylated S MARF1 195936.7 1 6 1655.1 123.29 HUMAN 1 17.3455 29.5873 RLSTIQNSPTKKRKK-p Q5VYV7;S396-p RLSTIQNSPTKKRKK 0.776195238243228 0.0989337459498716 -0.04 -0.277333333333333 2.10969558799258 13.279533760279 -0.04 -0.277333333333333 0.615219994093584 0.0469944557106761 -0.532960164784436 -2.56012063800683 Q5VYV7 SLX4IP Q5VYV7.S396.p_SLX4IP Q5VYV7_S396s _1_1_396_396 Q5VYV7 Q5VYV7 Protein SLX4IP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11902.11902.2 14.01 14.01 2.635 4 1 1 0 992.5759 1904.1784 S396s TMT10 390 (R) LSTIQNsPTKK (R) LS(0.0)T(0.0)IQNS(0.99)PT(0.0)KK K:TMT10,s:Phosphorylated S SLX4IP 46121.3 9 4 2344.1 87.17 HUMAN 1 -2.1097 -13.2795 RLSYNTASNKTRLSR-p P49207;S17-p RLSYNTASNKTRLSR 0.363419774329538 0.10634189580341 -0.180666666666667 0.197666666666667 8.1605998717548 12.8587107824648 -0.180666666666667 0.197666666666667 0.152735507686765 0.0517760508059287 -1.66300945479792 2.48429290646573 P49207 RPL34 P49207.S17.p_RPL34 P49207_S17s _1_1_17_17 P49207 P49207 60S ribosomal protein L34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11713.11713.3 10.55 10.55 1.606 4 1 1 0 512.6019 1455.8208 S17s TMT10 11 (R) LSYNTAsNK (T) LS(0.0)Y(0.0)NT(0.0)AS(0.99)NK K:TMT10,s:Phosphorylated S RPL34 13520.9 1 2 4190.1 35.62 HUMAN 1 -8.1606 12.8587 RLTGPSHSKGSLGEE-p Q86U86;S316-p RLTGPSHSKGSLGEE 0.703541668762757 0.0138319957403419 -0.0536666666666667 -0.49 2.87173883257969 25.8150479620568 -0.0536666666666667 -0.49 0.516209647357427 0.00262117009113341 -0.694238395225528 -5.24638151443075 Q86U86 PBRM1 Q86U86.S316.p_PBRM1 Q86U86_S316s _1_1_316_316 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-9|Q86U86-7|Q86U86-4 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6600.6600.2 10.81 4.09 2.149 3 1 1 0 682.8712 1284.7676 S316s TMT10 310 (R) LTGPSHsK (G) LT(0.0)GPS(0.0)HS(0.99)K K:TMT10,s:Phosphorylated S PBRM1 194199.5 1 6 194.1 462.54 HUMAN 1 -2.8717 -25.815 RLTSYLQSQLKSLCA-p Q9ULE0;S351-p RLTSYLQSQLKSLCA 0.416481641896136 0.00522879771554352 0.115666666666667 0.581333333333333 7.02192772982671 33.18728348538 0.115666666666667 0.581333333333333 0.19852135327274 0.000480033616067627 1.46485100212877 7.45012160788631 Q9ULE0 WWC3 Q9ULE0.S351.p_WWC3 Q9ULE0_S351s _1_1_351_351 Q9ULE0 Q9ULE0|Q9ULE0-2 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23664.23664.2 14.39 14.39 5.382 4 1 1 0 859.9774 1638.9831 S351s TMT10 345 (R) LTSYLQsQLK (S) LT(0.0)S(0.0)Y(0.0)LQS(0.99)QLK K:TMT10,s:Phosphorylated S WWC3 123814.7 2 6 161.1 495.35 HUMAN 1 7.0219 33.1873 RLTYHGVSPCKVTAE-p Q9UBS8;S348-p RLTYHGVSPCKVTAE 0.359204648614872 0.0304113300175539 -0.188666666666667 0.277 8.26273911320713 20.5086853047746 -0.188666666666667 0.277 0.149185319483399 0.00889470337356398 -1.68071076540147 3.98512947498314 Q9UBS8 RNF14 Q9UBS8.S348.p_RNF14 Q9UBS8_S348s _1_1_348_348 Q9UBS8 Q9UBS8|Q9UBS8-2 E3 ubiquitin-protein ligase RNF14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12808.12808.3 17.65 17.65 9.417 3 1 1 0 567.2939 1619.898 S348s TMT10 342 (R) LTYHGVsPCK (V) LT(0.0)Y(0.0)HGVS(0.99)PCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RNF14 55662.2 3 2 2286.1 89.63 HUMAN 1 -8.2627 20.5087 RLVQTRKSGYFPSSS-p P52735-3;S629-p RLVQTRKSGYFPSSS 0.28296354989842 0.541089948527304 -0.182333333333333 -0.0746666666666666 10.364639972448 3.58796668857962 -0.182333333333333 -0.0746666666666666 0.0919466694888798 0.437726995392123 -2.04513825413136 -0.837369992317178 P52735 VAV2 P52735.3.S629.p_VAV2 P52735-3_S629s _1_1_629_629 P52735-3 P52735-2|P52735-3 Isoform 3 of Guanine nucleotide exchange factor VAV2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14914.14914.4 7.24 7.24 1.175 7 1 1 0 842.1883 3285.7567 S629s TMT10 629 (K) sGYFPSSSVKPCPVDGRPPISRPPSR (E) S(0.99)GY(0.0)FPS(0.0)S(0.0)S(0.0)VKPCPVDGRPPIS(0.0)RPPS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S VAV2 98228.6 1 2 2598.1 77.13 HUMAN 1 -10.3646 -3.588 RLVRDPLSPAVRQKE-p Q6P444;S119-p RLVRDPLSPAVRQKE 0.827100696431272 0.0330563508390189 -0.0416666666666667 -0.269666666666667 1.58776140741391 19.9655459668813 -0.0416666666666667 -0.269666666666667 0.69378332794504 0.0100796488658493 -0.41544161640069 -3.86794861960251 Q6P444 MTFR2 Q6P444.S119.p_MTFR2 Q6P444_S119s _1_1_119_119 Q6P444 Q6P444 Mitochondrial fission regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17994.17994.3 8.86 8.86 99 1 1 1 0 511.29 1451.8896 S119s TMT10 113 (R) LVRDPLsPAVR (Q) LVRDPLS(1.0)PAVR s:Phosphorylated S MTFR2 43611.5 2 1 4205.1 35.43 HUMAN 1 -1.5878 -19.9655 RLVSRSSSVLSLEGS-p A1L390;S640-p RLVSRSSSVLSLEGS 0.213619309408308 0.0346351493435808 -0.224333333333333 -0.265333333333333 12.9216129993426 19.6737509957747 -0.224333333333333 -0.265333333333333 0.0510315430140611 0.010780152396714 -2.49695155400117 -3.80579369740865 A1L390 PLEKHG3 A1L390.S640.p_PLEKHG3 A1L390_S640s _1_1_640_640 A1L390 A1L390|A1L390-3|A1L390-2|G3V311 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16921.16921.2 13.13 13.13 1.154 5 1 1 0 880.955 1680.942 S640s TMT10 638 (R) SSsVLSLEGSEK (G) S(0.0)S(0.0)S(0.99)VLS(0.0)LEGS(0.0)EK K:TMT10,s:Phosphorylated S PLEKHG3 135322.7 2 8 284.1 386.18 HUMAN 1 -12.9216 -19.6738 RLWLPSKSLPHLPGT-p Q14244-7;S357-p RLWLPSKSLPHLPGT 0.599833489163788 0.0320753859136855 -0.095 -0.318666666666667 4.09977936690554 20.167490291701 -0.095 -0.318666666666667 0.38906491001967 0.0096216813710868 -0.936155095261837 -3.91128899821778 Q14244 MAP7 Q14244.7.S357.p_MAP7 Q14244-7_S357s _1_1_357_357 Q14244-7 Q14244-7|Q14244-4|Q14244-6|Q14244-2|Q14244-3 Isoform 7 of Ensconsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18497.18497.4 15.49 15.49 6.083 6 1 1 0 666.6233 2583.5023 S357s TMT10 357 (K) sLPHLPGTPRPTSSLPPGSVK (A) S(0.99)LPHLPGT(0.0)PRPT(0.0)S(0.0)S(0.0)LPPGS(0.0)VK K:TMT10,s:Phosphorylated S MAP7 87064.8 2 13 581.1 266.4 HUMAN 1 -4.0998 -20.1675 RLYADSDSGDDSDKR-p O43896;S676-p RLYADSDSGDDSDKR 0.874041515701776 0.21583086558282 -0.0266666666666667 0.133333333333333 1.14358356790691 8.76331086331456 -0.0266666666666667 0.133333333333333 0.76849605637394 0.132944052665168 -0.309516942823395 1.76677437038508 O43896 KIF1C O43896.S676.p_KIF1C O43896_S676s _1_1_676_676 O43896 O43896 Kinesin-like protein KIF1C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9227.9227.3 14.17 14.17 1.101 4 1 1 0 694.6525 2001.9766 S676s TMT10 670 (R) LYADSDsGDDSDKR (S) LY(0.0)ADS(0.0)DS(0.99)GDDS(0.0)DKR K:TMT10,s:Phosphorylated S KIF1C 123800.2 2 4 954.1 195.97 HUMAN 1 -1.1436 8.7633 RLYNSEESRPYTNKV-p Q9NYV4-2;S889-p RLYNSEESRPYTNKV 0.164495596876669 0.116212421700754 -0.294666666666667 0.318333333333333 15.7013106024939 12.3309211669442 -0.294666666666667 0.318333333333333 0.0269072268216113 0.0584666059504164 -3.01104659914651 2.38994069604892 Q9NYV4 CDK12 Q9NYV4.2.S889.p_CDK12 Q9NYV4-2_S889s _1_1_889_889 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11506.11506.3 8.37 8.37 1.252 5 1 1 0 713.6896 2059.086 S889s TMT10 883 (R) LYNSEEsRPYTNK (V) LY(0.0)NS(0.0)EES(0.99)RPY(0.0)T(0.0)NK K:TMT10,s:Phosphorylated S CDK12 163853.1 3 26 59.1 708.76 HUMAN 1 -15.7013 12.3309 RLYSSEESRPYTNKV-p Q14004-2;S867-p RLYSSEESRPYTNKV 0.622172474425454 0.676048027995285 -0.0893333333333333 -0.065 3.82983166768307 2.32235704965341 -0.0893333333333333 -0.065 0.414015721736736 0.585820135624363 -0.884458768764754 -0.578991968041022 Q14004 CDK13 Q14004.2.S867.p_CDK13 Q14004-2_S867s _1_1_867_867 Q14004-2 Q14004|Q14004-2|A0A087X209|Q9BVE2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10868.10868.3 10.46 10.46 2.54 6 1 1 0 704.6854 2032.0751 S867s TMT10 861 (R) LYSSEEsRPYTNK (V) LY(0.0)S(0.0)S(0.0)EES(0.99)RPY(0.0)T(0.0)NK K:TMT10,s:Phosphorylated S CDK13 159173.6 3 12 145.1 520.12 HUMAN 1 -3.8298 -2.3224 RMAKASLTPVKSGEH-p Q9UPS6;T909-p RMAKASLTPVKSGEH 0.142109681552459 0.00129606731851265 -0.327 -1.37133333333333 17.3198011402228 47.186387733636 -0.327 -1.37133333333333 0.0185361649700634 1.91144244951071e-05 -3.32589020816484 -13.8891509969178 Q9UPS6 SETD1B Q9UPS6.T909.p_SETD1B Q9UPS6_T909t _1_1_909_909 Q9UPS6 Q9UPS6|Q9UPS6-2|A0A0A0MQV9 Histone-lysine N-methyltransferase SETD1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13206.13206.2 9.03 5.16 2.503 2 1 1 0 627.3674 1173.7607 T909t TMT10 906 (K) ASLtPVK (S) AS(0.0)LT(0.99)PVK K:TMT10,t:Phosphorylated T SETD1B 213997.2 1 18 570.1 269.37 HUMAN 1 -17.3198 -47.1864 RMCYQCESEDEPQAD-p Q9HBM0;S696-p RMCYQCESEDEPQAD 0.322168845598486 0.682401324186522 0.143 0.061 9.2105635395696 2.27131770423231 0.143 0.061 0.119934366648013 0.592745450847771 1.84481871977879 0.568013482906141 Q9HBM0 VEZT Q9HBM0.S696.p_VEZT Q9HBM0_S696s _1_1_696_696 Q9HBM0 Q9HBM0 Vezatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16649.16649.3 26.13 26.13 7.544 6 1 1 0 1069.4485 3126.3652 S696s TMT10 690 (R) MCYQCEsEDEPQADGSGLTTAPPTPR (D) MCY(0.0)QCES(0.99)EDEPQADGS(0.0)GLT(0.0)T(0.0)APPT(0.0)PR C:Carbamidomethylation,s:Phosphorylated S VEZT 89518.7 5 4 2200.1 93.61 HUMAN 1 9.2106 2.2713 RMDKNASTFEDVTQV-p Q14247;T323-p RMDKNASTFEDVTQV 0.79879406065728 0.204136776102466 0.0493333333333333 0.162 1.88045124039003 9.0786191632009 0.0493333333333333 0.162 0.64856704267362 0.123634046469649 0.482161273490822 1.82131180146646 Q14247 CTTN Q14247.T323.p_CTTN Q14247_T323t _1_1_323_323 Q14247 Q14247-2|Q14247-3 Src substrate cortactin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19893.19893.3 15.23 15.23 1.171 6 1 1 0 805.0622 2333.2025 T323t TMT10 320 (K) NAStFEDVTQVSSAYQK (T) NAS(0.0)T(0.99)FEDVT(0.0)QVS(0.0)S(0.0)AY(0.0)QK K:TMT10,t:Phosphorylated T CTTN 61756.2 1 6 493.1 293.68 HUMAN 1 1.8805 9.0786 RMEREDSSEEEEEEI-p P55081;S133-p RMEREDSSEEEEEEI 0.633387977519939 0.66880436165464 0.0836666666666667 0.0763333333333334 3.69283504581807 2.39004931326585 0.0836666666666667 0.0763333333333334 0.427283866992063 0.576759914362123 0.857939659581096 0.593473612598221 P55081 MFAP1 P55081.S133.p_MFAP1 P55081_S132sS133s_2_2_132_133 P55081 P55081 Microfibrillar-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10177.10177.5 14.08 14.08 99 2 2 2 0 666.4749 3168.4072 S132s S133s TMT10 127 (R) MEREDssEEEEEEIDDEEIERRR (G) MEREDS(1.0)S(1.0)EEEEEEIDDEEIERRR s:Phosphorylated S MFAP1 51957.5 6 13 354.1 349.52 HUMAN 1 3.6928 2.39 RMFAPFPSPVLPSNL-p Q9Y4B4;S1402-p RMFAPFPSPVLPSNL 0.813083216141779 0.49490066251578 0.0453333333333333 0.113 1.72609533473506 4.08493873458459 0.0453333333333334 0.113 0.672032794248456 0.390396689749328 0.447251629104854 0.933170750963822 Q9Y4B4 RAD54L2 Q9Y4B4.S1402.p_RAD54L2 Q9Y4B4_S1402s _1_1_1402_1402 Q9Y4B4 Q9Y4B4 Helicase ARIP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33493.33493.3 11.76 11.76 7.792 3 1 1 0 690.356 1989.0829 S1402s TMT10 1396 (R) MFAPFPsPVLPSNLSR (G) MFAPFPS(0.99)PVLPS(0.0)NLS(0.0)R s:Phosphorylated S RAD54L2 164135.1 1 5 1338.1 152.26 HUMAN 1 1.7261 4.0849 RMFPTPPSLEQHPAF-p Q71F56;S870-p RMFPTPPSLEQHPAF 0.668305358322548 0.00962210462395573 -0.059 0.504333333333333 3.27440281688715 28.4370392422264 -0.059 0.504333333333333 0.47050009809667 0.0014331646114752 -0.775616224913962 5.96152135857618 Q71F56 MED13L Q71F56.S870.p_MED13L Q71F56_S870sS878s_2_2_870_878 Q71F56 Q71F56 Mediator of RNA polymerase II transcription subunit 13-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31364.31364.3 14.26 14.26 2 4 2 2 0 1012.8125 2876.488 S870s S878s TMT10 864 (R) MFPTPPsLEQHPAFsPVMNYK (D) MFPT(0.0)PPS(0.99)LEQHPAFS(0.99)PVMNY(0.0)K K:TMT10,s:Phosphorylated S MED13L 245507 9 20 415.1 321.44 HUMAN 1 -3.2744 28.437 RMGFTEVTPVTGASL-p P55265-4;T851-p RMGFTEVTPVTGASL 0.854734502857347 0.0873198693961679 -0.037 -0.237333333333333 1.32369923450547 14.0191730681435 -0.037 -0.237333333333333 0.737275965509247 0.0396353495985685 -0.353213684450766 -2.69482012987623 P55265 ADAR P55265.4.T851.p_ADAR P55265-4_T851t _1_1_851_851 P55265-4 P55265-4|P55265-5 Isoform 4 of Double-stranded RNA-specific adenosine deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22678.22678.3 16.2 16.2 4.263 4 1 1 0 625.6479 1794.9621 T851t TMT10 845 (R) MGFTEVtPVTGASLR (R) MGFT(0.0)EVT(0.99)PVT(0.0)GAS(0.0)LR t:Phosphorylated T ADAR 142147.5 3 13 584.1 265.43 HUMAN 1 -1.3237 -14.0192 RMGPGAASGGERPNL-p Q9H0U4;S179-p RMGPGAASGGERPNL 0.470110243897234 0.466681505376195 -0.209666666666667 -0.0916666666666666 6.05160168357529 4.4131579991558 -0.209666666666667 -0.0916666666666667 0.24822174914969 0.361979686928359 -1.29375079535248 -0.99514455876553 Q9H0U4 RAB1B Q9H0U4.S179.p_RAB1B Q9H0U4_S179s _1_1_179_179 Q9H0U4 Q9H0U4|E9PLD0 Ras-related protein Rab-1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11025.11025.3 14.2 9.77 99 1 1 1 0 660.6754 1900.0475 S179s TMT10 173 (R) MGPGAAsGGERPNLK (I) MGPGAAS(1.0)GGERPNLK K:TMT10,s:Phosphorylated S RAB1B 22341.9 5 24 2008.2 102.72 HUMAN 1 -6.0516 -4.4132 RMHSQPRSRGRPSRR-p J3QR07;S519-p RMHSQPRSRGRPSRR 0.266920990214539 0.433412963048542 0.421666666666667 0.232 10.872344368326 4.83810140129236 0.421666666666667 0.232 0.0818023091265845 0.328238757399699 2.13375982438623 1.07409294612912 J3QR07 YTHDC1 J3QR07.S519.p_YTHDC1 J3QR07_S519s _1_1_519_519 J3QR07 J3QR07|Q96MU7|Q96MU7-2 YTH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.2609.2609.3 7.45 7.45 7.451 2 1 1 0 436.5461 1227.6578 S519s TMT10 513 (R) MHSQPRsR (G) MHS(0.0)QPRS(0.99)R s:Phosphorylated S YTHDC1 85871.1 1 15 702.1 239.92 HUMAN 1 10.8723 4.8381 RMIHRSTSQGSINSP-p O14639;S452-p RMIHRSTSQGSINSP 0.648120240178882 0.703846477821015 0.085 0.053 3.52862838085218 2.09675675904789 0.085 0.053 0.443748769636457 0.617055637012672 0.825881273399443 0.530061820957137 O14639 ABLIM1 O14639.S452.p_ABLIM1 O14639_S452s _1_1_452_452 O14639 O14639|O14639-6|A0A0A0MRL6|O14639-2|F8W8M4|O14639-5|O14639-3|O14639-4|J3QSX6 Actin-binding LIM protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9450.9450.2 13.62 13.62 13.617 7 1 1 0 896.4252 1711.8812 S452s TMT10 450 (R) STsQGSINSPVYSR (H) S(0.0)T(0.0)S(0.99)QGS(0.0)INS(0.0)PVY(0.0)S(0.0)R s:Phosphorylated S ABLIM1 89568.8 1 5 435.1 313.2 HUMAN 1 3.5286 2.0968 RMKDRKFSWGQQRTN-p Q9Y2K6;S333-p RMKDRKFSWGQQRTN 0.0866557243462627 0.0370459736980261 -0.421333333333333 0.333333333333333 22.7409434301125 19.2432113091172 -0.421333333333333 0.333333333333333 0.00531992680447914 0.011903614920407 -4.49345223058465 3.71507506356044 Q9Y2K6 USP20 Q9Y2K6.S333.p_USP20 Q9Y2K6_S333s _1_1_333_333 Q9Y2K6 Q9Y2K6 Ubiquitin carboxyl-terminal hydrolase 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10480.10480.3 7.87 7.87 99 1 1 1 0 449.2256 1265.6952 S333s Hydrogen 331 (R) KFsWGQQR (T) KFS(1.0)WGQQR K:TMT10-Lys-Only,s:Phosphorylated S USP20 103827 3 5 1704.1 120.18 HUMAN 1 -22.7409 19.2432 RMKETQKSIYYITGE-p P08238;S482-p RMKETQKSIYYITGE 0.993911734338014 0.044056009065469 -0.00133333333333333 -0.306 0.0535832758795533 18.159291627514 -0.00133333333333334 -0.306 0.987737795893952 0.015278152380147 -0.0160918255745374 -3.49168435590922 P08238 HSP90AB1 P08238.S482.p_HSP90AB1 P08238_S482s _1_1_482_482 P08238 P08238|Q58FF8 Heat shock protein HSP 90-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19399.19399.3 11.57 11.57 2.863 5 1 1 0 566.9635 1618.9092 S482s TMT10 482 (K) sIYYITGESK (E) S(0.99)IY(0.0)Y(0.0)IT(0.0)GES(0.0)K K:TMT10,s:Phosphorylated S HSP90AB1 83605 4 35 43.2 810.87 HUMAN 1 -0.0536 -18.1593 RMKGISRSLESVLSL-p Q13470-2;S497-p RMKGISRSLESVLSL 0.745341841524256 0.422497252807175 -0.0526666666666667 -0.138333333333333 2.42226243455544 4.98170015397183 -0.0526666666666667 -0.138333333333333 0.572497713577573 0.317563064753023 -0.600409647723288 -1.10048175172941 Q13470 TNK1 Q13470.2.S497.p_TNK1 Q13470-2_S497s _1_1_497_497 Q13470-2 Q13470|Q13470-2 Isoform 2 of Non-receptor tyrosine-protein kinase TNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24179.24179.3 15.97 15.97 1.151 4 1 1 0 627.3442 1800.0541 S497s TMT10 493 (K) GISRsLESVLSLGPR (P) GIS(0.0)RS(0.99)LES(0.0)VLS(0.0)LGPR s:Phosphorylated S TNK1 72548.5 5 5 1259.1 161.29 HUMAN 1 -2.4223 -4.9817 RMKKRDFSLEQLRQY-p O15173-2;S128-p RMKKRDFSLEQLRQY 0.0401593416855375 0.547648113865931 0.894666666666667 0.0873333333333334 31.2572531632945 3.51665302160354 0.894666666666667 0.0873333333333334 0.000748642854324267 0.444974063636374 6.82395506477111 0.82340369343643 O15173 PGRMC2 O15173.2.S128.p_PGRMC2 O15173-2_S128s _1_1_128_128 O15173-2 O15173-2 Isoform 2 of Membrane-associated progesterone receptor component 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20544.20544.2 11.19 3.17 99 1 1 1 0 658.826 1236.6786 S128s TMT10 126 (R) DFsLEQLR (Q) DFS(1.0)LEQLR s:Phosphorylated S PGRMC2 26226.7 2 1 2278.1 89.96 HUMAN 1 31.2573 3.5167 RMLERLVSSESKNYI-p O76024;S235-p RMLERLVSSESKNYI 0.378389324662461 0.0261582417768877 -0.152666666666667 -0.524 7.79946003932536 21.5141774873536 -0.152666666666667 -0.524 0.165979325760153 0.00705638472644702 -1.60035190397891 -4.20738643234594 O76024 WFS1 O76024.S235.p_WFS1 O76024_S235s _1_1_235_235 O76024 O76024 Wolframin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10973.10973.2 10.66 2.7 1.102 3 1 1 0 644.3518 1207.7298 S235s TMT10 233 (R) LVsSESK (N) LVS(0.99)S(0.0)ES(0.0)K K:TMT10,s:Phosphorylated S WFS1 101430.7 3 3 3140.1 59.55 HUMAN 1 -7.7995 -21.5142 RMLSPANSLDIAMEK-p P15822;S1753-p RMLSPANSLDIAMEK 0.93698049113563 0.179221418469082 0.0146666666666667 -0.159 0.549721738285341 9.81785531463401 0.0146666666666667 -0.159 0.881105325492334 0.104283228626767 0.156775378315625 -1.94931023381151 P15822 HIVEP1 P15822.S1753.p_HIVEP1 P15822_S1753s _1_1_1753_1753 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22190.22190.3 13.99 11.67 2.422 2 1 1 0 610.2979 1748.9124 S1753s Hydrogen 1747 (R) MLSPANsLDIAMEK (H) MLS(0.0)PANS(0.99)LDIAMEK K:TMT10-Lys-Only,s:Phosphorylated S HIVEP1 299483.8 8 26 82.1 631.69 HUMAN 1 0.5497 -9.8179 RMLTRSRSLGPGAGP-p P78549;S22-p RMLTRSRSLGPGAGP 0.15903936509186 0.00219928027114295 0.262333333333333 -0.949666666666667 15.9938741243063 41.2958590807909 0.262333333333333 -0.949666666666667 0.0251543203526199 7.42017404266541e-05 3.06701414046824 -10.7298592700111 P78549 NTHL1 P78549.S22.p_NTHL1 P78549_S22s _1_1_22_22 P78549 P78549|P78549-2|P78549-3 Endonuclease III-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4715.4715.2 15.15 15.15 99 1 1 1 0 446.208 811.4421 S22s Hydrogen 22 (R) sLGPGAGPR (G) S(1.0)LGPGAGPR s:Phosphorylated S NTHL1 34788.4 2 1 3002.1 63.53 HUMAN 1 15.9939 -41.2959 RMMSLSQSRSSKSAP-p O43353;S178-p RMMSLSQSRSSKSAP 0.148724295141356 0.055685672571272 -0.298 -0.243666666666667 16.6990229409383 16.7120440063504 -0.298 -0.243666666666667 0.021384431341196 0.0213204123207667 -3.20358756243847 -3.2037428679084 O43353 RIPK2 O43353.S178.p_RIPK2 O43353_S178s _1_1_178_178 O43353 O43353|O43353-2 Receptor-interacting serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12800.12800.2 10.26 10.26 1.7 3 1 1 0 624.7866 1168.6016 S178s TMT10 172 (R) MMSLSQsR (S) MMS(0.0)LS(0.0)QS(0.99)R s:Phosphorylated S RIPK2 61764.4 2 3 1914.1 107.79 HUMAN 1 -16.699 -16.712 RMNARYQTQPVTLGE-p O95425-2;T426-p RMNARYQTQPVTLGE 0.100054229677911 0.0138811738705875 0.398666666666667 0.807666666666667 21.1535854673992 25.7830574242399 0.398666666666667 0.807666666666667 0.007667282291444 0.0026405491616322 4.13101305861585 5.23806817417167 O95425 SVIL O95425.2.T426.p_SVIL O95425-2_T426t _1_1_426_426 O95425-2 O95425|O95425-3|O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20816.20816.3 16.52 16.52 2.014 4 1 1 0 843.7725 2449.3339 T426t TMT10 424 (R) YQtQPVTLGEVEQVQSGK (L) Y(0.0)QT(0.99)QPVT(0.0)LGEVEQVQS(0.0)GK K:TMT10,t:Phosphorylated T SVIL 202384.1 1 12 406.2 324.74 HUMAN 1 21.1536 25.7831 RMNRFRQSLPLSRSA-p A0A087X165;S199-p RMNRFRQSLPLSRSA 0.48374924621179 0.71388801424788 -0.105333333333333 -0.04 5.80825418151898 2.01507854080064 -0.105333333333333 -0.04 0.262527366390403 0.628770482897421 -1.25032931122424 -0.51207908789707 A0A087X165 NotFound A0A087X165.S199.p_NotFound A0A087X165_S199s _1_1_199_199 A0A087X165 A0A087X165|Q9C0H9-5 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13492.13492.3 11.39 11.39 4.743 2 1 1 0 471.5916 1332.7949 S199s TMT10 196 (R) FRQsLPLSR (S) FRQS(0.99)LPLS(0.0)R s:Phosphorylated S SRCIN1 130745.5 2 6 98.1 603.22 HUMAN 1 -5.8083 -2.0151 RMPLHEGSPLGELHR-p P83369;S154-p RMPLHEGSPLGELHR 0.718648709176867 0.990455751802061 0.0596666666666667 0.00233333333333335 2.70802366621568 0.0608080620543579 0.0596666666666667 0.00233333333333339 0.536040536737002 0.986095992420662 0.660457980763008 0.0182449845208939 P83369 LSM11 P83369.S154.p_LSM11 P83369_S154s _1_1_154_154 P83369 P83369 U7 snRNA-associated Sm-like protein LSm11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14359.14359.3 15.22 15.22 99 1 1 1 0 627.9786 1801.9581 S154s TMT10 148 (R) MPLHEGsPLGELHR (C) MPLHEGS(1.0)PLGELHR s:Phosphorylated S LSM11 39670.1 1 3 3741.1 44.09 HUMAN 1 2.708 0.0608 RMREDYDSVEQDGDE-p Q9Y5S9-2;S55-p RMREDYDSVEQDGDE 0.318288997290547 0.0247309816796438 -0.149333333333333 0.3 9.30975948517035 21.8655332701431 -0.149333333333333 0.3 0.117226028421215 0.00650798694370037 -1.86199802516199 4.2867503332777 Q9Y5S9 RBM8A Q9Y5S9.2.S55.p_RBM8A Q9Y5S9-2_S55s _1_1_55_55 Q9Y5S9-2 Q9Y5S9|Q9Y5S9-2 Isoform 2 of RNA-binding protein 8A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8996.8996.2 16.09 16.09 5.106 2 1 1 0 1266.5311 2452.0884 S55s TMT10 49 (R) MREDYDsVEQDGDEPGPQR (S) MREDY(0.0)DS(0.99)VEQDGDEPGPQR s:Phosphorylated S RBM8A 19816.6 9 4 2408.1 84.82 HUMAN 1 -9.3098 21.8655 RMRGRLGSVDSFERS-p O60343-2;S588-p RMRGRLGSVDSFERS 0.0144292492620541 0.00502548640285455 -0.960666666666667 -0.919 44.2840540235554 33.5128472797067 -0.960666666666667 -0.919 3.72901901263609e-05 0.00044536416729094 -12.2692986038437 -7.56245464095323 O60343 TBC1D4 O60343.2.S588.p_TBC1D4 O60343-2_S588s _1_1_588_588 O60343-2 O60343|O60343-3|O60343-2 Isoform 2 of TBC1 domain family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16798.16798.2 12.08 5.69 1.488 2 1 1 0 659.8157 1238.6578 S588s TMT10 586 (R) LGsVDSFER (S) LGS(0.99)VDS(0.0)FER s:Phosphorylated S TBC1D4 141150.8 2 8 603.1 262.97 HUMAN 1 -44.2841 -33.5128 RMRRNSFTPLSSSNT-p O60825;T468-p RMRRNSFTPLSSSNT 0.0428370985731628 0.0635570471399929 -0.499 -0.228666666666667 30.4863390487047 15.937653437521 -0.499 -0.231031413447796 0.000894058826634529 0.0254820671749424 -6.58146885532348 -3.05408063532112 O60825 PFKFB2 O60825.T468.p_PFKFB2 O60825_T468t _1_1_468_468 O60825 O60825 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16777.16777.3 10.65 10.65 1.112 6 1 1 0 578.288 1652.8805 T468t TMT10 465 (R) NSFtPLSSSNTIR (R) NS(0.0)FT(0.99)PLS(0.0)S(0.0)S(0.0)NT(0.0)IR t:Phosphorylated T PFKFB2 58989.2 1 2 2266.1 90.54 HUMAN 1 -30.4863 -15.9377 RMRSRTSSFTEQLDE-p Q13439-4;S41-p RMRSRTSSFTEQLDE 0.610138431047996 0.0389855335108308 -0.105333333333333 -0.254666666666667 3.97612466756894 18.920173244162 -0.105333333333333 -0.254666666666667 0.400301791042517 0.0128227943030077 -0.912563069868972 -3.64776372901763 Q13439 GOLGA4 Q13439.4.S41.p_GOLGA4 Q13439-4_S41s _1_1_41_41 Q13439-4 Q13439|Q13439-4|Q13439-3|Q86W71 Isoform 4 of Golgin subfamily A member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16970.16970.3 14.52 14.52 1.118 8 1 1 0 1133.5289 3318.6126 S41s TMT10 39 (R) TSsFTEQLDEGTPNRESGDTQSFAQK (L) T(0.0)S(0.0)S(0.99)FT(0.0)EQLDEGT(0.0)PNRES(0.0)GDT(0.0)QS(0.0)FAQK K:TMT10,s:Phosphorylated S GOLGA4 261859.2 5 1 575.2 268.28 HUMAN 1 -3.9761 -18.9202 RMRTRVLSLQGRGAT-p Q8N5J2-3;S489-p RMRTRVLSLQGRGAT 0.183956421457418 0.0224644789927254 -0.238 -0.313 14.454740772663 22.5179188197151 -0.238 -0.313 0.0358530348063454 0.00560025906920757 -2.7767990941884 -4.43654515052126 Q8N5J2 FAM63A Q8N5J2.3.S489.p_FAM63A Q8N5J2-3_S489s _1_1_489_489 Q8N5J2-3 Q8N5J2-3|Q8N5J2-4|Q8N5J2-2 Isoform 3 of Ubiquitin carboxyl-terminal hydrolase MINDY-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14626.14626.2 8.93 8.93 99 1 1 1 0 541.3025 1001.6305 S489s TMT10 487 (R) VLsLQGR (G) VLS(1.0)LQGR s:Phosphorylated S MINDY1 57731.8 2 3 4449.1 31.23 HUMAN 1 -14.4547 -22.5179 RMSRFQKSAGLEEIE-p Q9H6U6;S461-p RMSRFQKSAGLEEIE 0.247048592039774 0.0323705301095536 -0.199333333333333 0.283 11.6062864088258 20.1030778606537 -0.199333333333333 0.283 0.0690830270624957 0.00976544894769462 -2.26268906515045 3.89743597897258 Q9H6U6 BCAS3 Q9H6U6.S461.p_BCAS3 Q9H6U6_S461s _1_1_461_461 Q9H6U6 Q9H6U6-8|Q9H6U6-3|Q9H6U6-7|Q9H6U6-2|K7ESE9|Q9H6U6-6 Breast carcinoma-amplified sequence 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.31093.31093.3 16.55 15.84 15.842 3 1 1 0 691.3568 1992.0901 S461s TMT10 461 (K) sAGLEEIEQELTSK (Q) S(0.99)AGLEEIEQELT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S BCAS3 102547.1 1 2 847.1 212.9 HUMAN 1 -11.6063 20.1031 RMSTSQNSIPFEHHG-p P48730-2;S401-p RMSTSQNSIPFEHHG 0.837310998322305 0.304556952100615 -0.034 0.1 1.49146677123965 6.81905671559934 -0.034 0.1 0.709338158074393 0.208014844474397 -0.392987197937788 1.42891677775923 P48730 CSNK1D P48730.2.S401.p_CSNK1D P48730-2_S401s _1_1_401_401 P48730-2 P48730-2 Isoform 2 of Casein kinase I isoform delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11777.11777.4 19.8 19.8 2.995 4 1 1 0 560.2752 2158.1115 S401s TMT10 395 (R) MSTSQNsIPFEHHGK (-) MS(0.0)T(0.0)S(0.0)QNS(0.99)IPFEHHGK K:TMT10,s:Phosphorylated S CSNK1D 47116.9 8 13 1498.1 136.39 HUMAN 1 -1.4915 6.8191 RMTRARRSQVEQQQL-p Q6PL18;S1302-p RMTRARRSQVEQQQL 0.777764453490353 0.00318236578405637 0.0613333333333333 -0.640333333333333 2.09682236123954 37.4829570882875 0.0613333333333334 -0.640333333333333 0.617046316172065 0.000178527157888718 0.530138860444026 -9.05486568193228 Q6PL18 ATAD2 Q6PL18.S1302.p_ATAD2 Q6PL18_S1302s _1_1_1302_1302 Q6PL18 Q6PL18|A0A0B4J211 ATPase family AAA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11830.11830.3 11.89 7.04 11.888 2 1 1 0 817.7887 2371.3822 S1302s TMT10 1299 (R) ARRsQVEQQQLITVEK (A) ARRS(0.99)QVEQQQLIT(0.0)VEK K:TMT10,s:Phosphorylated S ATAD2 159920.6 5 21 266.1 395.28 HUMAN 1 2.0968 -37.483 RMVRHPDSHQLFIGN-p Q13283;S339-p RMVRHPDSHQLFIGN 0.452265730447125 0.0886642515243664 -0.112333333333333 -0.246666666666667 6.35703025363215 13.9265329805074 -0.112333333333333 -0.246666666666667 0.231364634242549 0.0404898997929387 -1.34792553300233 -2.67784353995088 Q13283 G3BP1 Q13283.S339.p_G3BP1 Q13283_S339s _1_1_339_339 Q13283 Q13283 Ras GTPase-activating protein-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18642.18642.5 18.09 18.09 18.092 2 1 1 0 662.3554 3227.778 S339s TMT10 336 (R) HPDsHQLFIGNLPHEVDKSELK (D) HPDS(0.99)HQLFIGNLPHEVDKS(0.0)ELK K:TMT10,s:Phosphorylated S G3BP1 52220.4 1 9 1003.1 189.39 HUMAN 1 -6.357 -13.9265 RMVTGNGSLKRKSSR-p P52701;S309-p RMVTGNGSLKRKSSR 0.241601130409521 0.0369181497054097 -0.241666666666667 -0.421666666666667 11.7959708423551 19.2645756491644 -0.241666666666667 -0.421666666666667 0.0661306689344968 0.011845201012649 -2.29619695422288 -3.7195493575718 P52701 MSH6 P52701.S309.p_MSH6 P52701_S309s _1_1_309_309 P52701 P52701|P52701-3|P52701-2|A0A087WWJ1|P52701-4 DNA mismatch repair protein Msh6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13669.13669.2 13.22 6.92 3.21 2 1 1 0 722.8872 1364.7972 S309s TMT10 303 (R) MVTGNGsLK (R) MVT(0.0)GNGS(0.99)LK K:TMT10,s:Phosphorylated S MSH6 154608.6 8 10 875.1 209.27 HUMAN 1 -11.796 -19.2646 RNANTFISPQQRWRA-p P08493-2;S70-p RNANTFISPQQRWRA 0.780519381080653 0.818989930830292 0.0596666666666667 0.0263333333333334 2.06961605006828 1.21338977901129 0.0596666666666667 0.0263333333333334 0.620923926283953 0.756242398154834 0.524164407701387 0.326547356433555 P08493 MGP P08493.2.S70.p_MGP P08493-2_S70s _1_1_70_70 P08493-2 P08493-2 Isoform 2 of Matrix Gla protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10751.10751.3 10.81 10.81 3.66 2 1 1 0 528.93 1504.807 S70s TMT10 64 (R) NANTFIsPQQR (W) NANT(0.0)FIS(0.99)PQQR s:Phosphorylated S MGP 15496.3 1 1 4178.1 35.99 HUMAN 1 2.0696 1.2134 RNASLSQSPRVGFLS-p A4D1P6;S256-p RNASLSQSPRVGFLS 0.0645929327454927 0.0746300329356068 -0.404333333333333 -0.222 25.7278183109621 14.9597677204588 -0.404333333333333 -0.222 0.00267434953735708 0.0319170855696427 -5.23050418266189 -2.86904296206583 A4D1P6 WDR91 A4D1P6.S256.p_WDR91 A4D1P6_S256s _1_1_256_256 A4D1P6 A4D1P6|C9J1X0|A4D1P6-2|A4D1P6-3 WD repeat-containing protein 91 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5102.5102.2 12.67 7.14 2.348 3 1 1 0 634.8127 1188.6534 S256s TMT10 250 (R) NASLSQsPR (V) NAS(0.0)LS(0.0)QS(0.99)PR s:Phosphorylated S WDR91 84255.8 2 2 3379.1 52.46 HUMAN 1 -25.7278 -14.9598 RNCSEEKSPQTSILK-p Q8ND24;S154-p RNCSEEKSPQTSILK 0.451943451197645 0.661698762454924 -0.104666666666667 -0.0416666666666666 6.36509378372108 2.45555095950852 -0.104666666666667 -0.0416666666666666 0.230935458902358 0.568126312714118 -1.34935134418447 -0.607403324298667 Q8ND24 RNF214 Q8ND24.S154.p_RNF214 Q8ND24_S154s _1_1_154_154 Q8ND24 Q8ND24 RING finger protein 214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13071.13071.3 12.64 5.39 1.758 4 1 1 0 796.7541 2308.2786 S154s TMT10 148 (R) NCSEEKsPQTSILK (E) NCS(0.0)EEKS(0.99)PQT(0.0)S(0.0)ILK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RNF214 78407.7 5 7 887.1 205.7 HUMAN 1 -6.3651 -2.4556 RNDREYDSGDTDEII-p Q76FK4;S378-p RNDREYDSGDTDEII 0.390342873465048 0.618028835500003 0.119666666666667 -0.0536666666666667 7.55116399744985 2.84068149219345 0.119666666666667 -0.0536666666666667 0.175745251784779 0.5199144054877 1.55718760992154 -0.687769253939046 Q76FK4 NOL8 Q76FK4.S378.p_NOL8 Q76FK4_S378sT381t_2_2_378_381 Q76FK4 Q76FK4 Nucleolar protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18358.18358.3 12.39 12.39 5.691 3 2 2 0 787.6562 2201.023 S378s T381t Hydrogen 372 (R) NDREYDsGDtDEIIAMK (K) NDREY(0.0)DS(0.99)GDT(0.99)DEIIAMK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T NOL8 132527 3 10 605.1 262.45 HUMAN 1 7.5512 -2.8407 RNEEENIYSVPHDST-p Q9NRY4;Y1105-p RNEEENIYSVPHDST 0.54543406139008 0.333944165481148 -0.117 0.099 4.85941576669338 6.3131321246216 -0.117 0.099 0.326631769254548 0.233715108121061 -1.07823122084471 1.33982506156549 Q9NRY4 ARHGAP35 Q9NRY4.Y1105.p_ARHGAP35 Q9NRY4_Y1105y _1_1_1105_1105 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11584.11584.4 29.2 29.2 3.864 4 1 1 0 622.0462 2405.1985 Y1105y TMT10 1099 (R) NEEENIySVPHDSTQGK (I) NEEENIY(0.99)S(0.0)VPHDS(0.0)T(0.0)QGK K:TMT10,y:Phosphorylated Y ARHGAP35 172051.4 7 1 97.1 29.2 HUMAN 1 -4.8594 6.3131 RNEKGEISMEKVKVK-p P55081;S30-p RNEKGEISMEKVKVK 0.934979371920407 0.00319184557443355 -0.0156666666666667 -0.762333333333333 0.572458250526061 37.4554172880532 -0.0156666666666667 -0.762333333333334 0.876504550114889 0.000179662844440769 -0.162904581362304 -9.04368017454743 P55081 MFAP1 P55081.S30.p_MFAP1 P55081_S30s _1_1_30_30 P55081 P55081 Microfibrillar-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15848.15848.4 14.08 6.54 2.185 3 1 1 0 834.202 3253.8182 S30s TMT10 10 (K) QPPIQSTAGAVPVRNEKGEIsMEK (V) Q(0.0)PPIQS(0.0)T(0.0)AGAVPVRN(0.0)EKGEIS(0.99)M(0.0)EK K:TMT10,s:Phosphorylated S MFAP1 51957.5 2 2 354.1 349.52 HUMAN 1 -0.5725 -37.4554 RNEPIIISDDDEQPC-p Q149N8-2;S37-p RNEPIIISDDDEQPC 0.735304684778739 0.967670362765191 0.0486666666666667 -0.00799999999999995 2.52865376493173 0.202415871909253 0.0486666666666667 -0.00799999999999994 0.558643337323569 0.954461495189055 0.622935567799472 -0.0597943444919979 Q149N8 SHPRH Q149N8.2.S37.p_SHPRH Q149N8-2_S37s _1_1_37_37 Q149N8-2 Q149N8-2|K4DI94 Isoform 2 of E3 ubiquitin-protein ligase SHPRH HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20080.20080.3 14.86 14.86 99 1 1 1 0 979.7927 2857.3814 S37s TMT10 31 (R) NEPIIIsDDDEQPCPGEDVEK (Q) NEPIIIS(1.0)DDDEQPCPGEDVEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SHPRH 109051 1 1 4136.1 36.86 HUMAN 1 2.5287 -0.2024 RNESCDISKEHTSET-p P49454;S1770-p RNESCDISKEHTSET 0.233493203593579 0.195080685730673 -0.425333333333333 -0.413 12.1334989879388 9.33215793571294 -0.425333333333333 -0.413 0.0611857237002075 0.116622999314208 -2.35603617321148 -1.86517946551612 P49454 CENPF P49454.S1770.p_CENPF P49454_S1770s _1_1_1770_1770 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7759.7759.2 9.99 4.69 2.849 2 1 1 0 745.8513 1410.7299 S1770s TMT10 1764 (R) NESCDIsK (E) NES(0.0)CDIS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CENPF 371067.2 1 20 47.1 771.73 HUMAN 1 -12.1335 -9.3322 RNFDFEGSLSPVIAP-p Q9H1A4;S686-p RNFDFEGSLSPVIAP 0.756736491111287 0.00687726723352394 -0.0453333333333333 -0.595333333333333 2.31793424312767 31.0115371135614 -0.0453333333333334 -0.595333333333333 0.586417032196104 0.000792220887360866 -0.578113891898888 -6.73473634891691 Q9H1A4 ANAPC1 Q9H1A4.S686.p_ANAPC1 Q9H1A4_S686sS688s_2_2_686_688 Q9H1A4 Q9H1A4 Anaphase-promoting complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27620.27620.3 11.38 11.38 99 2 2 2 0 866.1224 2436.4106 S686s S688s TMT10 680 (R) NFDFEGsLsPVIAPKK (A) NFDFEGS(1.0)LS(1.0)PVIAPKK K:TMT10,s:Phosphorylated S ANAPC1 218664.2 6 20 460.1 305.66 HUMAN 1 -2.3179 -31.0115 RNFDGYRSPLPTNES-p Q9H6U6;S910-p RNFDGYRSPLPTNES 0.58813607527305 0.211365118645541 -0.0726666666666667 0.202333333333333 4.24468725890874 8.8800765845523 -0.0720918110955634 0.202333333333333 0.376297448959654 0.129417301948486 -0.963622265819503 1.78697022513408 Q9H6U6 BCAS3 Q9H6U6.S910.p_BCAS3 Q9H6U6_S910s _1_1_910_910 Q9H6U6 Q9H6U6-8|Q9H6U6-3|Q9H6U6-2|K7ESE9|Q9H6U6-6 Breast carcinoma-amplified sequence 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.36258.36466.3 10.68 10.68 1.699 6 1 1 0 1030.8339 3010.5148 S910s TMT10 904 (R) NFDGYRsPLPTNESQPLSLFPTGFP (-) NFDGY(0.0)RS(0.99)PLPT(0.0)NES(0.0)QPLS(0.0)LFPT(0.0)GFP s:Phosphorylated S BCAS3 102547.1 3 12 847.1 212.9 HUMAN 1 -4.2447 8.8801 RNFSPSASAHFSFAR-p O15021;S270-p RNFSPSASAHFSFAR 0.682264803548482 0.626434449053383 -0.0696666666666667 0.07 3.11157029142007 2.76235683020858 -0.0696666666666667 0.07 0.488475707800232 0.529376084001748 -0.742983794455849 0.671626602514116 O15021 MAST4 O15021.S270.p_MAST4 O15021_S266sS270s_2_2_266_270 O15021 O15021|J3QT34|O15021-1|E7EWQ5|O15021-3|O15021-2|D6RAK1|F8WBH1 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19356.19356.3 10.07 10.07 1.305 4 2 2 0 638.9423 1754.8812 S266s S270s TMT10 264 (R) NFsPSAsAHFSFAR (S) NFS(0.99)PS(0.0)AS(0.99)AHFS(0.0)FAR s:Phosphorylated S MAST4 286597.7 1 17 121.99 549.41 HUMAN 1 -3.1116 2.7624 RNGGMRNSPNTSPKL-p A0A1W2PQA0;S724-p RNGGMRNSPNTSPKL 0.457955481063929 0.411569936883501 0.111666666666667 -0.0853333333333333 6.25272117023591 5.12929813364043 0.111666666666667 -0.0853333333333333 0.236988833326384 0.306951801526873 1.32946150857978 -1.12746781507142 A0A1W2PQA0 NotFound A0A1W2PQA0.S724.p_NotFound A0A1W2PQA0_S724s _1_1_724_724 A0A1W2PQA0 Q5SVJ8|A0A1W2PRV4|A0A1W2PR62|Q5SVJ9|A0A1W2PRB0|A0A1W2PQA0|A0A0A0MRR0|A0A1W2PNY9|A0A1W2PPX7|Q12791-3|Q12791-7|A0A1W2PRN5|A0A1W2PPZ1|A0A1W2PRG5|Q12791-4|A0A1W2PQ61|A0A1W2PP94|A0A1W2PNH9|Q12791-5|A0A1W2PPY5|A0A1W2PNW6|Q12791-2|A0A1W2PR56|Q5SVJ7|B7ZMF5|A0A1W2PQU4|A0A1W2PSD3|A0A1W2PQK5|A0A1W2PNQ3|D5MRH1|A0A0A0MRC3 Calcium-activated potassium channel subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4522.4522.3 9.7 6.02 1.277 3 1 1 0 633.3155 1817.9692 S724s TMT10 718 (R) NGGMRNsPNTSPK (L) NGGMRNS(0.99)PNT(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S KCNMA1 139284.7 3 2 2591.1 77.42 HUMAN 1 6.2527 -5.1293 RNGPLNESQEDEEDS-p Q9H2K8;S324-p RNGPLNESQEDEEDS 0.640860993560146 0.00556995614729869 0.069 0.590666666666667 3.60800603790944 32.6706681782139 0.069 0.590666666666667 0.435711874741146 0.000540671132281433 0.841416513407308 7.27476690262056 Q9H2K8 TAOK3 Q9H2K8.S324.p_TAOK3 Q9H2K8_S324s _1_1_324_324 Q9H2K8 Q9H2K8 Serine/threonine-protein kinase TAO3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8224.8224.3 26.12 26.12 12.299 4 1 1 0 922.73 2686.2026 S324s TMT10 318 (R) NGPLNEsQEDEEDSEHGTSLNR (E) NGPLNES(0.99)QEDEEDS(0.0)EHGT(0.0)S(0.0)LNR s:Phosphorylated S TAOK3 105860.4 2 12 1125.2 174.76 HUMAN 1 3.608 32.6707 RNGVLGDSRDKEAMA-p Q9Y289;S608-p RNGVLGDSRDKEAMA 0.376518154999368 0.527940459374322 0.129333333333333 -0.0696666666666666 7.84630262868094 3.72931108239015 0.129333333333333 -0.0696666666666666 0.164198708600277 0.423710173500095 1.60848644363579 -0.864880771107208 Q9Y289 SLC5A6 Q9Y289.S608.p_SLC5A6 Q9Y289_S608s _1_1_608_608 Q9Y289 Q9Y289 Sodium-dependent multivitamin transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25910.25910.4 11.59 11.59 2.173 9 1 1 0 1028.9967 4032.9894 S608s TMT10 602 (R) NGVLGDsRDKEAMALDGTAYQGSSSTCILQETSL (-) NGVLGDS(0.99)RDKEAMALDGT(0.0)AY(0.0)QGS(0.0)S(0.0)S(0.0)T(0.0)CILQET(0.0)S(0.0)L K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SLC5A6 69553.6 2 1 3451.1 50.67 HUMAN 1 7.8463 -3.7293 RNHSGSRTPPVALNS-p Q9UQ35;T2104-p RNHSGSRTPPVALNS 0.224767265517543 0.0249628041136662 0.186333333333333 0.299333333333333 12.4479627070202 21.8046347330202 0.186333333333333 0.299333333333333 0.0569119844654732 0.00659988740830337 2.41205212608412 4.27292983524572 Q9UQ35 SRRM2 Q9UQ35.T2104.p_SRRM2 Q9UQ35_T2104t _1_1_2104_2104 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4306.4306.3 9.86 3.98 1.102 5 1 1 0 663.668 1909.0201 T2104t TMT10 2098 (R) NHSGSRtPPVALNSSR (M) NHS(0.0)GS(0.0)RT(0.99)PPVALNS(0.0)S(0.0)R t:Phosphorylated T SRRM2 300351.7 8 132 2.1 3310.34 HUMAN 1 12.448 21.8046 RNIEEHASADVEKMI-p P61006;S111-p RNIEEHASADVEKMI 0.936107507392066 0.635630740398694 -0.0153333333333334 0.053 0.56233287356879 2.67858061776487 -0.0153333333333333 0.053 0.878550464384289 0.539686976803619 -0.160178117161212 0.654250187484123 P61006 RAB8A P61006.S111.p_RAB8A P61006_S111s _1_1_111_111 P61006 P61006|P61006-2 Ras-related protein Rab-8A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9462.9462.3 16.82 16.82 99 1 1 1 0 627.3132 1799.954 S111s TMT10 105 (R) NIEEHAsADVEK (M) NIEEHAS(1.0)ADVEK K:TMT10,s:Phosphorylated S RAB8A 23838.9 1 6 2008.4 102.72 HUMAN 1 -0.5623 2.6786 RNIPRVMSPENFPTA-p Q3L8U1;S550-p RNIPRVMSPENFPTA 0.89934219379599 0.804736354592703 0.0196666666666667 0.0423333333333333 0.901051122500596 1.32087293126008 0.0196666666666667 0.0423333333333334 0.812633810680756 0.737755926394052 0.248870594983962 0.352499812266885 Q3L8U1 CHD9 Q3L8U1.S550.p_CHD9 Q3L8U1_S550s _1_1_550_550 Q3L8U1 Q3L8U1|Q3L8U1-3|Q3L8U1-2 Chromodomain-helicase-DNA-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18175.18175.5 19.52 14.39 19.518 3 1 1 0 621.5396 3023.6893 S550s TMT10 548 (R) VMsPENFPTASVEGKEEKK (G) VMS(0.99)PENFPT(0.0)AS(0.0)VEGKEEKK K:TMT10,s:Phosphorylated S CHD9 328184.1 5 2 1062.1 182 HUMAN 1 0.9011 1.3209 RNIRRLLSFQRYLRS-p Q13946;S113-p RNIRRLLSFQRYLRS 0.35707940462963 0.00195162346428314 0.138333333333333 0.801666666666667 8.31644800101874 42.400206178248 0.138333333333333 0.801666666666667 0.14735171669907 5.75412619379679e-05 1.69001616059886 11.2654533453083 Q13946 PDE7A Q13946.S113.p_PDE7A Q13946_S113s _1_1_113_113 Q13946 Q13946|Q13946-2|Q9NP56|Q13946-3 High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14084.14084.3 8.18 8.18 99 1 1 1 0 410.2303 1148.7101 S113s TMT10 110 (R) RLLsFQR (Y) RLLS(1.0)FQR s:Phosphorylated S PDE7A 56017.5 1 2 5233.1 21.49 HUMAN 1 8.3164 42.4002 RNKEKSGSQPACLDH-p O75815;S317-p RNKEKSGSQPACLDH 0.0530637440823008 0.0169810526826426 0.604666666666667 0.373666666666667 27.6893764750851 24.4243518538073 0.604666666666667 0.373666666666667 0.00170240290809978 0.0036104789277798 5.75877466980681 4.89351953660882 O75815 BCAR3 O75815.S317.p_BCAR3 O75815_S317s _1_1_317_317 O75815 O75815|O75815-3 Breast cancer anti-estrogen resistance protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5906.5906.4 12.29 12.29 2.218 2 1 1 0 517.4836 1986.9435 S317s TMT10 315 (K) SGsQPACLDHMQDRR (A) S(0.0)GS(0.99)QPACLDHMQDRR C:Carbamidomethylation,s:Phosphorylated S BCAR3 93533.8 6 7 401.1 327.42 HUMAN 1 27.6894 24.4244 RNKKITRSLTEDFER-p Q9C0I3;S130-p RNKKITRSLTEDFER 0.128023476673973 0.953118976700446 -0.369666666666667 -0.00633333333333334 18.4909899614106 0.296298800878056 -0.369666666666667 -0.00633333333333334 0.0141547109073699 0.934049989536944 -3.56232275556563 -0.0866628709685272 Q9C0I3 CCSER1 Q9C0I3.S130.p_CCSER1 Q9C0I3_S130s _1_1_130_130 Q9C0I3 Q9C0I3|Q9C0I3-2|E7EUW0 Serine-rich coiled-coil domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15634.15634.3 13.56 10.12 3.152 2 1 1 0 597.9687 1711.9267 S130s TMT10 130 (R) sLTEDFEREK (E) S(0.99)LT(0.0)EDFEREK K:TMT10,s:Phosphorylated S CCSER1 100307.3 1 1 1823.1 112.62 HUMAN 1 -18.491 -0.2963 RNLDSATSPQNGDQQ-p Q92585;S120-p RNLDSATSPQNGDQQ 0.307290133537941 0.200096950904064 0.193 -0.156333333333333 9.57861490945947 9.19417045527869 0.193 -0.156333333333333 0.110189067827095 0.120387932049609 1.90858504338026 -1.84130198432601 Q92585 MAML1 Q92585.S120.p_MAML1 Q92585_S120s_1_1_120_120 Q92585 Q92585 Mastermind-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17770.17770.4 18.29 18.29 1.101 4 1 1 0 889.9368 3475.7809 S120s N128n TMT10 114 (R) NLDSATsPQNGDQQnGYGDLFPGHKK (T) N(0.0)LDS(0.0)AT(0.0)S(0.99)PQN(0.0)GDQQN(0.99)GY(0.0)GDLFPGHKK K:TMT10,s:Phosphorylated S,n:Deamidated MAML1 108508.8 8 2 1563.1 131.35 HUMAN 1 9.5786 -9.1942 RNLFPIFSPSALKPE-p I3L4C2;S33-p RNLFPIFSPSALKPE 0.77396492534342 0.0149879362389162 0.0406666666666667 -0.540333333333333 2.13040829993864 25.2494069669087 0.0406666666666667 -0.540333333333333 0.612292824593421 0.0029857903034821 0.537492053604381 -5.10077315325385 I3L4C2 BAIAP2 I3L4C2.S33.p_BAIAP2 I3L4C2_S33s _1_1_33_33 I3L4C2 I3L4C2|I3L3J7 Brain-specific angiogenesis inhibitor 1-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31955.31955.4 16.5 16.5 2.687 3 1 1 0 586.0731 2261.3058 S33s TMT10 27 (R) NLFPIFsPSALKPESR (N) NLFPIFS(0.99)PS(0.0)ALKPES(0.0)R K:TMT10,s:Phosphorylated S BAIAP2 61608.4 2 2 386.1 333.05 HUMAN 1 2.1304 -25.2494 RNLGLYGSA______-p Q5JTZ5;S238-p RNLGLYGSA______ 0.102957268131371 0.482552934336713 -0.339666666666667 -0.203 20.8504118368249 4.22386546931617 -0.339666666666667 -0.203 0.00822164681250504 0.378105899025829 -4.06388170107286 -0.95951777230318 Q5JTZ5 C9orf152 Q5JTZ5.S238.p_C9orf152 Q5JTZ5_S238s _1_1_238_238 Q5JTZ5 Q5JTZ5 Uncharacterized protein C9orf152 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19384.19384.2 7.16 7.16 3.223 2 1 1 0 552.2704 1023.5672 S238s TMT10 232 (R) NLGLYGsA (-) NLGLY(0.0)GS(0.99)A s:Phosphorylated S C9orf152 26655.7 1 2 2848.1 68.13 HUMAN 1 -20.8504 -4.2239 RNLGVQQSQGWVHYM-p P61024;S51-p RNLGVQQSQGWVHYM 0.207292801328694 0.0186697134330253 -0.245666666666667 0.344 13.2077432959587 23.7873505348391 -0.245666666666667 0.344 0.0477777474433936 0.00418085346802236 -2.54856941667782 4.73751935253204 P61024 CKS1B P61024.S51.p_CKS1B P61024_S51s _1_1_51_51 P61024 P61024|Q9BZU3 Cyclin-dependent kinases regulatory subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27299.27299.4 28.34 28.34 5.989 2 1 1 0 860.1866 3357.7516 S51s TMT10 45 (R) NLGVQQsQGWVHYMIHEPEPHILLFR (R) NLGVQQS(0.99)QGWVHY(0.0)MIHEPEPHILLFR s:Phosphorylated S CKS1B 9660 3 2 3871.1 41.51 HUMAN 1 -13.2077 23.7874 RNLLEDDSDEEEDFF-p O75379;S30-p RNLLEDDSDEEEDFF 0.536999686617219 0.264520058399026 0.085 0.114666666666667 4.99547379440663 7.60720874349475 0.085 0.114666666666667 0.31655750955651 0.173491869006977 1.10322858476761 1.56646678208809 O75379 VAMP4 O75379.S30.p_VAMP4 O75379_S30s _1_1_30_30 O75379 O75379 Vesicle-associated membrane protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30233.30233.2 22.85 22.85 99 1 1 1 0 1147.9965 2215.024 S30s TMT10 24 (R) NLLEDDsDEEEDFFLR (G) NLLEDDS(1.0)DEEEDFFLR s:Phosphorylated S VAMP4 16453.6 18 1 1944.1 105.95 HUMAN 1 4.9955 7.6072 RNLLGALSLPVSETA-p Q4KWH8;S982-p RNLLGALSLPVSETA 0.445065812877998 0.53958320499659 -0.162333333333333 -0.14 6.4799425969583 3.60405685749623 -0.162333333333333 -0.14 0.224908433299878 0.436108261860202 -1.36963620373726 -0.840513024794577 Q4KWH8 PLCH1 Q4KWH8.S982.p_PLCH1 Q4KWH8_S982s _1_1_982_982 Q4KWH8 Q4KWH8|Q4KWH8-2|Q4KWH8-4|Q4KWH8-3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29104.29104.4 9.96 9.96 1.453 5 1 1 0 872.7331 3407.9449 S982s TMT10 963 (R) SLQARPVSMPVDRNLLGALsLPVSETAK (D) S(0.0)LQARPVS(0.0)MPVDRNLLGALS(0.99)LPVS(0.0)ET(0.0)AK K:TMT10,s:Phosphorylated S PLCH1 191330.6 1 7 201.1 451.38 HUMAN 1 -6.4799 -3.6041 RNLLSKVSPSFSAEL-p Q13416;S280-p RNLLSKVSPSFSAEL 0.912869099045042 0.587476868482012 0.0276666666666667 0.133 0.772203536197868 3.12281211668391 0.0276666666666667 0.133 0.837104441828018 0.487212910862272 0.215719699269474 0.74514125486631 Q13416 ORC2 Q13416.S280.p_ORC2 Q13416_S280s _1_1_280_280 Q13416 Q13416 Origin recognition complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21213.21213.2 14.06 7.92 1.399 3 1 1 0 801.9325 1522.8881 S280s TMT10 279 (K) VsPSFSAELK (Q) VS(0.99)PS(0.0)FS(0.0)AELK K:TMT10,s:Phosphorylated S ORC2 66027.4 3 4 1988.1 103.92 HUMAN 1 0.7722 3.1228 RNLNLVSSTASIKDL-p Q9NRY4;S770-p RNLNLVSSTASIKDL 0.338303322331957 0.814763285324871 -0.195333333333333 0.0263333333333334 8.75935225944485 1.24507014794383 -0.195333333333333 0.0263333333333334 0.133065286709255 0.750745927852926 -1.76670648294257 0.334236114299679 Q9NRY4 ARHGAP35 Q9NRY4.S770.p_ARHGAP35 Q9NRY4_S770s _1_1_770_770 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15629.15629.3 14.51 14.51 1.158 4 1 1 0 647.7029 1861.1271 S770s TMT10 763 (K) RNLNLVSsTASIK (D) RNLNLVS(0.0)S(0.99)T(0.0)AS(0.0)IK K:TMT10,s:Phosphorylated S ARHGAP35 172051.4 10 2 247.1 410.47 HUMAN 1 -8.7594 1.2451 RNLPRSRSQPCDLDA-p Q9NYF3;S273-p RNLPRSRSQPCDLDA 0.91593380801589 0.465769586191802 -0.0203333333333333 0.0773333333333333 0.747301099028528 4.42491607869198 -0.0203333333333333 0.0773333333333333 0.84191818488145 0.361000989356033 -0.209232381983285 0.997347678610374 Q9NYF3 FAM53C Q9NYF3.S273.p_FAM53C Q9NYF3_S273s _1_1_273_273 Q9NYF3 Q9NYF3 Protein FAM53C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5743.5743.2 14.22 7.24 99 1 1 1 0 749.8496 1418.7259 S273s Hydrogen 273 (R) sQPCDLDARK (T) S(1.0)QPCDLDARK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S FAM53C 43832.4 8 9 976.1 192.85 HUMAN 1 -0.7473 4.4249 RNLTEDNSQNQDLIA-p Q9UBB4;S430-p RNLTEDNSQNQDLIA 0.143638422086766 0.523069387137989 0.314 0.159666666666667 17.2233913873093 3.78106782206726 0.314 0.159666666666667 0.018952253697029 0.418690606858882 3.30676396276809 0.874899839496167 Q9UBB4 ATXN10 Q9UBB4.S430.p_ATXN10 Q9UBB4_S430s _1_1_430_430 Q9UBB4 Q9UBB4|Q9UBB4-2|B1AHE3 Ataxin-10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35377.35377.4 22.62 19.73 3.531 3 1 1 0 964.7485 3775.9991 S430s TMT10 424 (R) NLTEDNsQNQDLIAKMEEQGLADASLLK (K) NLT(0.0)EDNS(0.99)QNQDLIAKMEEQGLADAS(0.0)LLK K:TMT10,s:Phosphorylated S ATXN10 54229.5 4 2 3107.1 60.47 HUMAN 1 17.2234 3.7811 RNLVRRESEALDSPN-p P0C7T5;S284-p RNLVRRESEALDSPN 0.706129390725202 0.112643775287512 0.0596666666666667 0.223333333333333 2.8423505840318 12.5078924606351 0.0596666666666667 0.223333333333333 0.519714629024107 0.0561320306834519 0.688205900040868 2.42148938606378 P0C7T5 ATXN1L P0C7T5.S284.p_ATXN1L P0C7T5_S284s _1_1_284_284 P0C7T5 P0C7T5 Ataxin-1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31036.31036.4 19.66 19.66 2.591 6 1 1 0 1142.5681 4487.2877 S284s TMT10 282 (R) REsEALDSPNSKGEGQGLVPVVECVVDGQLFSGSQTPR (V) RES(0.99)EALDS(0.0)PNS(0.0)KGEGQGLVPVVECVVDGQLFS(0.0)GS(0.0)QT(0.0)PR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ATXN1L 73818.4 2 4 1155.1 171.78 HUMAN 1 2.8424 12.5079 RNLVYDQSPNRTGGP-p Q9NXR1;S282-p RNLVYDQSPNRTGGP 0.714570848433642 0.00839507320642349 0.051 -0.49 2.75070166391835 29.5042468169077 0.051 -0.49 0.530798679298446 0.00112092180718079 0.669305605376117 -6.27296882673911 Q9NXR1 NDE1 Q9NXR1.S282.p_NDE1 Q9NXR1_S282s _1_1_282_282 Q9NXR1 Q9NXR1|Q9NXR1-2 Nuclear distribution protein nudE homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8858.8858.3 15.35 12.05 2.887 4 1 1 0 733.3568 2118.0889 S282s TMT10 276 (R) NLVYDQsPNRTGGPASGR (S) NLVY(0.0)DQS(0.99)PNRT(0.0)GGPAS(0.0)GR s:Phosphorylated S NDE1 38864.4 7 4 2022.1 102 HUMAN 1 2.7507 -29.5042 RNLYAGDYYRVQGRA-p Q08345-5;Y802-p RNLYAGDYYRVQGRA 0.716998750868002 0.189441129035682 0.08 0.147666666666667 2.72636900556998 9.50117567532975 0.08 0.147666666666667 0.533780985843019 0.112171475463801 0.664264844150433 1.89443857653534 Q08345 DDR1 Q08345.5.Y802.p_DDR1 Q08345-5_Y802y _1_1_802_802 Q08345-5 Q08345-5 Isoform 4 of Epithelial discoidin domain-containing receptor 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.14861.14861.2 15.03 15.03 1.447 3 1 1 0 722.3252 1363.6844 Y802y TMT10 796 (R) NLYAGDyYR (V) NLY(0.0)AGDY(0.99)Y(0.0)R y:Phosphorylated Y DDR1 102764.5 1 2 207.1 17.45 HUMAN 1 2.7264 9.5012 RNNVVRNSRTSGSSG-p Q9BYG5;S259-p RNNVVRNSRTSGSSG 0.125683938208233 0.870866417140156 0.464 -0.039 18.7411923032916 0.846167898034116 0.464 -0.039 0.0133622862068091 0.822968495740575 3.61385273487187 -0.234810620151673 Q9BYG5 PARD6B Q9BYG5.S259.p_PARD6B Q9BYG5_S259s _1_1_259_259 Q9BYG5 Q9BYG5 Partitioning defective 6 homolog beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3206.3206.3 7.64 7.64 99 1 1 1 0 423.2205 1187.6806 S259s TMT10 253 (R) NNVVRNsR (T) NNVVRNS(1.0)R s:Phosphorylated S PARD6B 41238.5 1 3 2369.1 86.37 HUMAN 1 18.7412 -0.8462 RNQDLALSNLESIPG-p Q9UHD9;S256-p RNQDLALSNLESIPG 0.970349550775535 0.0706624267750748 0.00699999999999999 -0.276333333333333 0.257980706787557 15.2985669475884 0.00699999999999998 -0.276333333333333 0.94232763881489 0.0295218320527269 0.0757659754994418 -2.93267688491152 Q9UHD9 UBQLN2 Q9UHD9.S256.p_UBQLN2 Q9UHD9_S256s _1_1_256_256 Q9UHD9 Q9UHD9 Ubiquilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28003.28003.3 18.05 12.56 2.225 3 1 1 0 818.7493 2374.2564 S256s TMT10 250 (R) NQDLALsNLESIPGGYNALR (R) NQDLALS(0.99)NLES(0.0)IPGGY(0.0)NALR s:Phosphorylated S UBQLN2 65695 1 1 4305.1 33.98 HUMAN 1 0.258 -15.2986 RNQDRALSNLESIPG-p Q9NRR5;S270-p RNQDRALSNLESIPG 0.662812468106192 0.511447283899316 0.0646666666666667 0.0903333333333334 3.34322684398799 3.90560518481634 0.0646666666666667 0.0903333333333333 0.46310270272849 0.406854835063274 0.789303550220832 0.898892792827672 Q9NRR5 UBQLN4 Q9NRR5.S270.p_UBQLN4 Q9NRR5_S270s _1_1_270_270 Q9NRR5 Q9NRR5|Q9UMX0|Q9UMX0-2|Q9UMX0-3 Ubiquilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22538.22538.3 9.87 8.07 1.214 3 1 1 0 714.0424 2060.145 S270s TMT10 268 (R) ALsNLESIPGGYNALRR (M) ALS(0.99)NLES(0.0)IPGGY(0.0)NALRR s:Phosphorylated S UBQLN4 63909 1 6 2792.1 70.44 HUMAN 1 3.3432 3.9056 RNQIHVKSPPREGSQ-p A8K070;S503-p RNQIHVKSPPREGSQ 0.934559013892197 0.424039119750647 -0.0136666666666667 0.0866666666666667 0.578269835078614 4.95963234530085 -0.0136666666666667 0.0866666666666667 0.875332425253806 0.319180804816262 -0.16446724214688 1.09643520241192 A8K070 NotFound A8K070.S503.p_NotFound A8K070_S503s _1_1_503_503 A8K070 Q13098-7|A8K070|A0A096LPJ3|Q13098-5|A0A096LP07|C9JFE4 COP9 signalosome complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8619.8619.4 16.36 11.32 1.685 5 1 1 0 814.6711 3175.6972 S503s TMT10 497 (R) NQIHVKsPPREGSQGELTPANSQSR (M) NQIHVKS(0.99)PPREGS(0.0)QGELT(0.0)PANS(0.0)QS(0.0)R K:TMT10,s:Phosphorylated S GPS1 59605.7 7 4 2547.1 79 HUMAN 1 -0.5783 4.9596 RNQSLGQSAPSLTAG-p Q6P0Q8;S148-p RNQSLGQSAPSLTAG 0.512436496519705 0.320794419628764 0.0936666666666667 -0.112 5.36681735563731 6.52845352397184 0.0936666666666667 -0.112 0.290615159211564 0.222410172841013 1.17087471239364 -1.37783651551741 Q6P0Q8 MAST2 Q6P0Q8.S148.p_MAST2 Q6P0Q8_S148s _1_1_148_148 Q6P0Q8 Q6P0Q8|Q6P0Q8-2 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20581.20581.3 14.05 14.05 3.034 4 1 1 0 704.0501 2030.1646 S148s TMT10 142 (R) NQSLGQsAPSLTAGLK (E) NQS(0.0)LGQS(0.99)APS(0.0)LT(0.0)AGLK K:TMT10,s:Phosphorylated S MAST2 197687.5 7 40 121.1 549.41 HUMAN 1 5.3668 -6.5285 RNQVIPRTPSSFRQP-p P57740;T55-p RNQVIPRTPSSFRQP 0.477468266229797 0.0350917284270556 0.112333333333333 -0.32 5.90851976740693 19.5856297026454 0.112333333333333 -0.32 0.256535825435828 0.0110011232361317 1.2682499670868 -3.78713053862499 P57740 NUP107 P57740.T55.p_NUP107 P57740_T55t _1_1_55_55 P57740 P57740|G3V1T4 Nuclear pore complex protein Nup107 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15512.15512.4 10.66 7.32 1.319 6 1 1 0 657.0932 2545.3837 T55t TMT10 49 (R) NQVIPRtPSSFRQPFTPTSR (S) NQVIPRT(0.99)PS(0.0)S(0.0)FRQPFT(0.0)PT(0.0)S(0.0)R t:Phosphorylated T NUP107 107113.9 2 4 1162.1 171.06 HUMAN 1 5.9085 -19.5856 RNRGNRGSGGGGGGG-p Q99729-4;S256-p RNRGNRGSGGGGGGG 0.473883553504948 0.00466206681165093 -0.103 -0.581333333333333 5.97372165860396 34.1004282739604 -0.103 -0.581333333333333 0.252713145924367 0.000389006781695456 -1.27988088335676 -7.76885039106181 Q99729 HNRNPAB Q99729.4.S256.p_HNRNPAB Q99729-4_S256s _1_1_256_256 Q99729-4 Q99729-4|Q99729-3 Isoform 4 of Heterogeneous nuclear ribonucleoprotein A/B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5738.5738.3 23.43 23.43 12.325 4 1 1 0 664.9772 1912.9513 S256s TMT10 255 (R) GsGGGGGGGGQGSTNYGK (S) GS(0.99)GGGGGGGGQGS(0.0)T(0.0)NY(0.0)GK K:TMT10,s:Phosphorylated S HNRNPAB 30814.7 6 3 1879.1 109.49 HUMAN 1 -5.9737 -34.1004 RNRNASASFQELEDK-p Q99543;S49-p RNRNASASFQELEDK 0.979213683234262 0.00153570152759703 0.00866666666666667 0.883 0.179369322064586 45.3880574095547 0.00866666666666663 0.883 0.959539964795743 2.89197316685823e-05 0.0531230192346881 12.8421732229652 Q99543 DNAJC2 Q99543.S49.p_DNAJC2 Q99543_S49s _1_1_49_49 Q99543 Q99543|Q99543-2|F2Z3N9|F2Z3H0 DnaJ homolog subfamily C member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16068.16068.4 8.84 8.84 2.411 2 1 1 0 559.2973 2154.201 S49s TMT10 45 (R) NASAsFQELEDKK (E) NAS(0.0)AS(0.99)FQELEDKK K:TMT10,s:Phosphorylated S DNAJC2 72508.6 1 2 2137.1 96.08 HUMAN 1 0.1794 45.3881 RNRRERFSPPRHELS-p Q9BXP5;S67-p RNRRERFSPPRHELS 0.711933993473629 0.0118032019929087 0.0543333333333333 0.467 2.77613117265197 26.9468275198582 0.0543333333333333 0.467 0.527699743081964 0.002019841299881 0.67456328811012 5.54672040077985 Q9BXP5 SRRT Q9BXP5.S67.p_SRRT Q9BXP5_S67s _1_1_67_67 Q9BXP5 Q9BXP5|Q9BXP5-3|Q9BXP5-2|Q9BXP5-4|Q9BXP5-5 Serrate RNA effector molecule homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7802.8223.5 16.83 14.04 14.402 2 1 1 0 500.6741 2419.3723 S67s TMT10 64 (R) ERFsPPRHELSPPQKR (M) ERFS(0.99)PPRHELS(0.0)PPQKR K:TMT10,s:Phosphorylated S SRRT 101121.1 13 4 321.1 364.45 HUMAN 1 2.7761 26.9468 RNRYRDVSPFDHSRI-p P18031;S50-p RNRYRDVSPFDHSRI 0.328749137036182 0.166565653829041 0.155333333333333 -0.155333333333333 9.03359391026058 10.2363596250524 0.155333333333333 -0.155333333333333 0.124922483331159 0.0947030655712828 1.81417840739653 -2.02196623118206 P18031 PTPN1 P18031.S50.p_PTPN1 P18031_S50s _1_1_50_50 P18031 P18031 Tyrosine-protein phosphatase non-receptor type 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7982.7982.4 14.45 14.45 4.698 3 1 1 0 422.7002 1607.8128 S50s TMT10 46 (R) YRDVsPFDHSR (I) Y(0.0)RDVS(0.99)PFDHS(0.0)R s:Phosphorylated S PTPN1 50536.5 7 1 1124.1 174.81 HUMAN 1 9.0336 -10.2364 RNSASATTPLSGNSS-p Q9Y608;T317-p RNSASATTPLSGNSS 0.114690899194205 0.0737948997882683 0.279333333333333 0.369333333333333 19.5689760302109 15.0253664680929 0.279333333333333 0.369333333333333 0.0110433896777376 0.0314386112252904 3.78705250357119 2.8813259430047 Q9Y608 LRRFIP2 Q9Y608.T317.p_LRRFIP2 Q9Y608_T317t _1_1_317_317 Q9Y608 Q9Y608|Q9Y608-5|Q9Y608-4|Q9Y608-2 Leucine-rich repeat flightless-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5846.5846.3 10.4 10.4 1.122 7 1 1 0 586.9459 1678.8558 T317t TMT10 311 (R) NSASATtPLSGNSSR (R) NS(0.0)AS(0.0)AT(0.0)T(0.99)PLS(0.0)GNS(0.0)S(0.0)R t:Phosphorylated T LRRFIP2 82398.2 5 3 1556.1 131.81 HUMAN 1 19.569 15.0254 RNSATCHSEDSDLEI-p Q13371;S293-p RNSATCHSEDSDLEI 0.518846820664332 0.431902759085041 0.1 -0.0813333333333333 5.26387975234076 4.85786153274604 0.1 -0.0813333333333333 0.29758567718936 0.326748683711444 1.15220302969511 -1.0777323659349 Q13371 PDCL Q13371.S293.p_PDCL Q13371_S293sS296s_2_2_293_296 Q13371 Q13371|Q13371-2 Phosducin-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12757.12757.3 10.73 10.73 4.668 4 2 2 0 694.593 1921.8283 S293s S296s TMT10 287 (R) NSATCHsEDsDLEID (-) NS(0.0)AT(0.0)CHS(0.99)EDS(0.99)DLEID C:Carbamidomethylation,s:Phosphorylated S PDCL 34680.3 4 4 4196.1 35.57 HUMAN 1 5.2639 -4.8579 RNSATFKSFEDRVGT-p O43399-2;S146-p RNSATFKSFEDRVGT 0.720864219409363 0.139962950234914 -0.0543333333333333 -0.273 2.68533399379759 11.2541410390509 -0.0543333333333334 -0.273 0.538848403689655 0.0749179518881963 -0.655741892162397 -2.1996756866056 O43399 TPD52L2 O43399.2.S146.p_TPD52L2 O43399-2_S146s _1_1_146_146 O43399-2 O43399-7|O43399-5|O43399-3|O43399-4|O43399-2|O43399-6 Isoform 2 of Tumor protein D54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19772.19772.5 14.15 14.15 2.194 4 1 1 0 514.2825 2487.4174 S146s TMT10 140 (R) NSATFKsFEDRVGTIK (S) NS(0.0)AT(0.0)FKS(0.99)FEDRVGT(0.0)IK K:TMT10,s:Phosphorylated S TPD52L2 19957.8 16 16 793.1 224.4 HUMAN 1 -2.6853 -11.2541 RNSDEEESASESELW-p Q70Z53;S283-p RNSDEEESASESELW 0.175496488250389 0.0393465291354279 -0.404666666666667 0.281333333333333 15.0335613114452 18.8535289794162 -0.404666666666667 0.281333333333333 0.031379344624331 0.0130210828451006 -2.88474799758562 3.63395608913412 Q70Z53 FRA10AC1 Q70Z53.S283.p_FRA10AC1 Q70Z53_S283sS285s_2_2_283_285 Q70Z53 Q70Z53 Protein FRA10AC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20859.20859.3 9.04 9.04 1.144 4 2 2 0 786.6646 2198.0501 S283s S285s TMT10 277 (R) NSDEEEsAsESELWK (G) NS(0.0)DEEES(0.99)AS(0.99)ES(0.0)ELWK K:TMT10,s:Phosphorylated S FRA10AC1 37946.8 9 4 1518.1 134.45 HUMAN 2 -15.0336 18.8535 RNSGSFPSPSISPR_-p Q9ULD2;S1264-p RNSGSFPSPSISPR_ 0.786969878882323 0.418593254762966 0.063 -0.100333333333333 2.00905423887559 5.033116857295 0.063 -0.100333333333333 0.629643285061059 0.313825561303947 0.510806233907517 -1.10989791934641 Q9ULD2 MTUS1 Q9ULD2.S1264.p_MTUS1 Q9ULD2_S1264s _1_1_1264_1264 Q9ULD2 Q9ULD2|Q9ULD2-2|Q9ULD2-6 Microtubule-associated tumor suppressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14029.14029.2 13.98 13.98 1.972 5 1 1 0 821.3972 1561.8172 S1264s TMT10 1258 (R) NSGSFPsPSISPR (-) NS(0.0)GS(0.0)FPS(0.99)PS(0.0)IS(0.0)PR s:Phosphorylated S MTUS1 142763.7 2 14 645.1 254.81 HUMAN 1 2.0091 -5.0331 RNSKQQLSAEELDAQ-p Q86V81;S239-p RNSKQQLSAEELDAQ 0.407530934819907 0.151689811407285 -0.111666666666667 0.169 7.19785753655168 10.7681019163662 -0.111666666666667 0.169 0.190640095258214 0.0837895404223601 -1.49560462249482 2.11460027928966 Q86V81 ALYREF Q86V81.S239.p_ALYREF Q86V81_S239s _1_1_239_239 Q86V81 E9PB61|Q86V81 THO complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21764.21764.2 20.9 20.9 12.603 2 1 1 0 1172.5533 2264.1356 S239s TMT10 236 (K) QQLsAEELDAQLDAYNAR (M) QQLS(0.99)AEELDAQLDAY(0.0)NAR s:Phosphorylated S ALYREF 26887.4 2 5 2379.1 85.93 HUMAN 1 -7.1979 10.7681 RNSLNRASFRKADL_-p Q96HP0;S2041-p RNSLNRASFRKADL_ 0.0635370415880919 0.00356137322963082 0.636666666666667 -0.640333333333333 25.9652259726583 36.4878415330667 0.636666666666667 -0.640333333333333 0.00253207988235002 0.000224499742234889 5.29246654236133 -8.65841429671755 Q96HP0 DOCK6 Q96HP0.S2041.p_DOCK6 Q96HP0_S2041s _1_1_2041_2041 Q96HP0 Q96HP0 Dedicator of cytokinesis protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6275.6275.3 8.07 8.07 8.074 2 1 1 0 458.5676 1293.7225 S2041s TMT10 2035 (R) NSLNRAsFR (K) NS(0.0)LNRAS(0.99)FR s:Phosphorylated S DOCK6 231436.7 1 7 1743.1 118.18 HUMAN 1 25.9652 -36.4878 RNSMRADSVSSSNIK-p Q53F19;S444-p RNSMRADSVSSSNIK 0.194748055065004 0.260093308472007 -0.228 -0.130666666666667 13.8660224109222 7.70509807737781 -0.228 -0.130666666666667 0.0410579970246348 0.169625129512873 -2.66835279321788 -1.58347482879381 Q53F19 NCBP3 Q53F19.S444.p_NCBP3 Q53F19_S444s _1_1_444_444 Q53F19 Q53F19|Q53F19-2 Nuclear cap-binding protein subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9565.9565.2 12.59 5.57 1.171 4 1 1 0 773.4003 1465.8262 S444s TMT10 442 (R) ADsVSSSNIK (N) ADS(0.99)VS(0.0)S(0.0)S(0.0)NIK K:TMT10,s:Phosphorylated S NCBP3 70705.4 1 4 1350.1 150.87 HUMAN 1 -13.866 -7.7051 RNSNANGYVRLQLGG-p Q9C0C4;Y789-p RNSNANGYVRLQLGG 0.0395731079578075 0.0257079144253812 0.553666666666667 -0.317 31.4133217936226 21.6253636729418 0.553666666666667 -0.317 0.000722217189127057 0.00687802314164077 6.87392405859454 -4.23240360587836 Q9C0C4 SEMA4C Q9C0C4.Y789.p_SEMA4C Q9C0C4_Y789y _1_1_789_789 Q9C0C4 Q9C0C4 Semaphorin-4C GG20160819_MSz_CCLE_T4D7_pY_Injection_01.4768.4768.2 18.17 9.79 10.018 2 1 1 0 652.3039 1223.633 Y789y TMT10 783 (R) NSNANGyVR (L) NS(0.0)NANGY(0.99)VR y:Phosphorylated Y SEMA4C 93819.3 2 1 191.1 18.17 HUMAN 1 31.4133 -21.6254 RNSNSPPSPSSMNQR-p Q7Z5L9;S460-p RNSNSPPSPSSMNQR 0.299833271733525 0.398127404984571 0.19 -0.128666666666667 9.83379837687404 5.3173552837517 0.19 -0.128666666666667 0.103901104033451 0.293943913264442 1.95284950621882 -1.16166254956523 Q7Z5L9 IRF2BP2 Q7Z5L9.S460.p_IRF2BP2 Q7Z5L9_S460s _1_1_460_460 Q7Z5L9 Q7Z5L9|Q7Z5L9-2|Q7Z5L9-3 Interferon regulatory factor 2-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5069.5069.2 15.16 15.16 1.219 5 1 1 0 791.8178 1502.6652 S460s Hydrogen 454 (R) NSNSPPsPSSMNQR (R) NS(0.0)NS(0.0)PPS(0.99)PS(0.0)S(0.0)MNQR s:Phosphorylated S IRF2BP2 61765.3 4 13 154.1 504.92 HUMAN 1 9.8338 -5.3174 RNSNVRRSFNGTDNH-p Q5T0W9;S466-p RNSNVRRSFNGTDNH 0.850669835142506 0.921112239217941 -0.0776666666666666 -0.0146666666666666 1.35877544677157 0.501122776474834 -0.0776666666666666 -0.0146666666666666 0.731345267305231 0.891020553846678 -0.36160063583932 -0.143576040061145 Q5T0W9 FAM83B Q5T0W9.S466.p_FAM83B Q5T0W9_S466s_1_1_466_466 Q5T0W9 Q5T0W9 Protein FAM83B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4724.4724.2 13.38 13.38 5.815 2 1 1 0 621.2515 1160.5443 S466s N468n Hydrogen 466 (R) sFnGTDNHIR (F) S(0.99)FN(0.99)GT(0.0)DN(0.0)HIR s:Phosphorylated S,n:Deamidated FAM83B 115253.5 6 4 249.1 407.75 HUMAN 1 -1.3588 -0.5011 RNSPMAQTPPCHLPN-p Q13542;T70-p RNSPMAQTPPCHLPN 0.6001203379453 0.040720136274863 -0.138333333333333 -0.43 4.09612562832901 18.6356886653435 -0.138333333333333 -0.43 0.389392369766926 0.0136908727356369 -0.935460066653775 -3.58900867253056 Q13542 EIF4EBP2 Q13542.T70.p_EIF4EBP2 Q13542_T70t_1_1_70_70 Q13542 Q13542 Eukaryotic translation initiation factor 4E-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29110.29110.5 13.6 13.6 1.14 6 1 1 0 1049.5255 5162.6152 T70t N77n TMT10 64 (R) NSPMAQtPPCHLPnIPGVTSPGTLIEDSKVEVNNLNNLNNHDR (K) N(0.0)S(0.0)PMAQT(0.99)PPCHLPN(0.99)IPGVT(0.0)S(0.0)PGT(0.0)LIEDS(0.0)KVEVN(0.0)N(0.0)LN(0.0)N(0.0)LN(0.0)N(0.0)HDR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,n:Deamidated EIF4EBP2 13053.3 1 3 1092.1 178.83 HUMAN 1 -4.0961 -18.6357 RNSPTFKSFEERVET-p J3KNE7;S154-p RNSPTFKSFEERVET 0.738219394528982 0.027223455897518 -0.066 -0.313333333333333 2.49987282974262 21.2303610833052 -0.066 -0.313333333333333 0.562357791929181 0.00753292930469837 -0.616862303941776 -4.14393071115646 J3KNE7 NotFound J3KNE7.S154.p_NotFound J3KNE7_S154s _1_1_154_154 J3KNE7 J3KNE7|Q16890|E9PPQ1|Q16890-5|E9PNK6 Tumor protein D53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24808.24808.3 16.27 16.27 7.499 5 1 1 0 722.0478 2084.164 S154s TMT10 154 (K) sFEERVETTVTSLK (T) S(0.99)FEERVET(0.0)T(0.0)VT(0.0)S(0.0)LK K:TMT10,s:Phosphorylated S TPD52L1 23056.4 10 5 793.3 224.4 HUMAN 1 -2.4999 -21.2304 RNSPVTKTPPRDLPT-p Q13541;T70-p RNSPVTKTPPRDLPT 0.979231901498508 0.600787527442354 0.004 0.0506666666666667 0.178950093576239 2.99943735780136 0.004 0.0506666666666667 0.959632594548576 0.501252168220247 0.0530012635431635 0.720196946094944 Q13541 EIF4EBP1 Q13541.T70.p_EIF4EBP1 Q13541_T70t _1_1_70_70 Q13541 Q13541 Eukaryotic translation initiation factor 4E-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20650.20862.4 16.8 11.65 1.321 8 1 1 0 877.9304 3428.7318 T70t TMT10 70 (K) tPPRDLPTIPGVTSPSSDEPPMEASQSHLR (N) T(0.99)PPRDLPT(0.0)IPGVT(0.0)S(0.0)PS(0.0)S(0.0)DEPPMEAS(0.0)QS(0.0)HLR t:Phosphorylated T EIF4EBP1 12693.9 6 5 227.1 424.6 HUMAN 1 0.179 2.9994 RNSRMVCSPVTVRIA-p A8CG34;S246-p RNSRMVCSPVTVRIA 0.626617753150603 0.0839340897122803 0.0796666666666667 -0.224 3.77069256924224 14.2470259961256 0.0796666666666666 -0.224 0.419692050379165 0.0376094862013451 0.873035415936579 -2.73670976032526 A8CG34 NotFound A8CG34.S246.p_NotFound A8CG34_S246s _1_1_246_246 A8CG34 Q96HA1|A8CG34|A0A075B7F8|Q96HA1-3|A8CG34-2|A0A087WY75|Q96HA1-2 Nuclear envelope pore membrane protein POM 121C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12700.12700.2 11.83 11.83 1.258 2 1 1 0 679.332 1277.6907 S246s TMT10 243 (R) MVCsPVTVR (I) MVCS(0.99)PVT(0.0)VR C:Carbamidomethylation,s:Phosphorylated S POM121C 125455.9 6 10 133.2 532.02 HUMAN 1 3.7707 -14.247 RNSRTALSEEEEEER-p Q9NU22;S3565-p RNSRTALSEEEEEER 0.48848292416817 0.752628053383012 -0.224 0.035 5.73080833168099 1.70466253577029 -0.224 0.0350000000000001 0.267250894097998 0.675357529944837 -1.23645710197429 0.442307784338103 Q9NU22 MDN1 Q9NU22.S3565.p_MDN1 Q9NU22_S3565s _1_1_3565_3565 Q9NU22 Q9NU22 Midasin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8146.8146.2 7.07 3.87 2.374 2 1 1 0 815.8548 1550.7383 S3565s TMT10 3562 (R) TALsEEEEEER (E) T(0.0)ALS(0.99)EEEEEER s:Phosphorylated S MDN1 638399.7 1 3 905.1 202.58 HUMAN 1 -5.7308 1.7047 RNSSPPPSPNKNNNA-p P20020;S1220-p RNSSPPPSPNKNNNA 0.177952626351024 0.0291117805384549 0.307333333333333 0.385666666666667 14.8423871812956 20.7907849055423 0.307333333333333 0.385666666666667 0.0327914998920506 0.00833530526050064 2.84894269685979 4.04677497902662 P20020 ATP2B1 P20020.S1220.p_ATP2B1 P20020_S1216sS1220s_2_2_1216_1220 P20020 P20020|P20020-4|P20020-3|P20020-6|E7ERY9 Plasma membrane calcium-transporting ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7257.7257.2 9.06 9.06 1.376 3 2 2 0 821.8859 1482.8317 S1216s S1220s TMT10 1214 (R) NSsPPPsPNK (N) NS(0.0)S(0.99)PPPS(0.99)PNK K:TMT10,s:Phosphorylated S ATP2B1 139722.6 6 13 921.1 200.23 HUMAN 1 14.8424 20.7908 RNSSSGVSPLYSPVS-p Q9BZH6;S402-p RNSSSGVSPLYSPVS 0.274481083437932 0.0345063839089973 0.160666666666667 0.268666666666667 10.6259952366479 19.6980643549965 0.160666666666667 0.267739058813296 0.0865765900233934 0.0107199698647744 2.09070871304229 3.81095172902678 Q9BZH6 WDR11 Q9BZH6.S402.p_WDR11 Q9BZH6_S402s _1_1_402_402 Q9BZH6 Q9BZH6 WD repeat-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36743.36743.4 25.2 25.2 1.15 9 1 1 0 1394.7063 5495.8343 S402s TMT10 396 (R) NSSSGVsPLYSPVSFCGIPVGVLQNKLPDLSLDNMIGQSAIAGEEHPR (G) NS(0.0)S(0.0)S(0.0)GVS(0.99)PLY(0.0)S(0.0)PVS(0.0)FCGIPVGVLQNKLPDLS(0.0)LDNMIGQS(0.0)AIAGEEHPR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WDR11 138508.1 6 2 1513.1 134.66 HUMAN 1 10.626 19.6981 RNSSSPVSPASVPGQ-p Q9H1B7;S662-p RNSSSPVSPASVPGQ 0.583395195139055 0.301368477994011 0.0943333333333333 -0.148666666666667 4.30618454274969 6.8764508061977 0.0943333333333333 -0.148666666666667 0.371006523273559 0.205283913948703 0.975223014600534 -1.43897823066464 Q9H1B7 IRF2BPL Q9H1B7.S662.p_IRF2BPL Q9H1B7_S662s _1_1_662_662 Q9H1B7 Q9H1B7 Interferon regulatory factor 2-binding protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6630.6630.3 16.55 16.55 1.782 5 1 1 0 645.6598 1854.9983 S662s TMT10 655 (R) RNSSSPVsPASVPGQR (R) RNS(0.0)S(0.0)S(0.0)PVS(0.99)PAS(0.0)VPGQR s:Phosphorylated S IRF2BPL 83627.3 3 15 282.1 386.92 HUMAN 1 4.3062 -6.8765 RNSTADISIGEEERE-p Q9NRL2;S702-p RNSTADISIGEEERE 0.978785641241596 0.232714225550127 -0.00800000000000001 -0.309333333333333 0.184065765679725 8.33987733326266 -0.00799999999999997 -0.309333333333333 0.95850288286367 0.146558923602733 -0.0544862590995175 -1.69351391258448 Q9NRL2 BAZ1A Q9NRL2.S702.p_BAZ1A Q9NRL2_S702s _1_1_702_702 Q9NRL2 Q9NRL2|Q9NRL2-2 Bromodomain adjacent to zinc finger domain protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11994.11994.2 16.63 14.09 5.383 3 1 1 0 865.3967 1649.818 S702s TMT10 696 (R) NSTADIsIGEEER (E) NS(0.0)T(0.0)ADIS(0.99)IGEEER s:Phosphorylated S BAZ1A 180353.8 2 3 567.1 270.71 HUMAN 1 -0.1841 -8.3399 RNTDVAQSPEAPKQE-p Q9P2E9;S615-p RNTDVAQSPEAPKQE 0.609605623677079 0.00799594721155976 -0.0806666666666667 -0.527333333333333 3.98204332061655 29.8959716363323 -0.0806666666666667 -0.527333333333333 0.399756623231695 0.00102424260340343 -0.913695623494704 -6.39045198763216 Q9P2E9 RRBP1 Q9P2E9.S615.p_RRBP1 Q9P2E9_S615s _1_1_615_615 Q9P2E9 Q9P2E9|A0A0A0MRV0|Q9P2E9-2|Q9P2E9-3|A0A087WVV2 Ribosome-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9597.9597.2 21.09 21.09 8.265 2 1 1 0 1324.7003 2568.4236 S615s TMT10 609 (R) NTDVAQsPEAPKQEAPAK (K) NT(0.0)DVAQS(0.99)PEAPKQEAPAK K:TMT10,s:Phosphorylated S RRBP1 152868.9 8 13 479.1 299.08 HUMAN 1 -3.982 -29.896 RNTEKAKSLIEEGGD-p Q15008-4;S219-p RNTEKAKSLIEEGGD 0.608670397110072 0.0243672937676495 -0.099 0.490666666666667 3.99182328997767 21.9783996962985 -0.099 0.490666666666667 0.398857415682815 0.00634103324853771 -0.915566306567648 4.3124371221555 Q15008 PSMD6 Q15008.4.S219.p_PSMD6 Q15008-4_S219s _1_1_219_219 Q15008-4 Q15008-4 Isoform 4 of 26S proteasome non-ATPase regulatory subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15927.15927.3 7.04 3.83 99 1 1 1 0 724.0417 2090.1395 S219s TMT10 217 (K) AKsLIEEGGDWDRR (N) AKS(1.0)LIEEGGDWDRR K:TMT10,s:Phosphorylated S PSMD6 52378.2 2 2 4381.1 32.29 HUMAN 1 -3.9918 21.9784 RNTETSKSPEKDVPM-p O14617-5;S829-p RNTETSKSPEKDVPM 0.772883727112607 0.00157273645056424 -0.067 -0.906 2.13997133367223 45.0827811939404 -0.067 -0.906 0.610946057543071 3.10257208458816e-05 -0.53958131111972 -12.6720401251308 O14617 AP3D1 O14617.5.S829.p_AP3D1 O14617-5_S829s _1_1_829_829 O14617-5 O14617-5 Isoform 5 of AP-3 complex subunit delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5407.5407.3 9.21 5.08 1.381 4 1 1 0 630.0067 1808.0369 S829s TMT10 823 (R) NTETSKsPEK (D) NT(0.0)ET(0.0)S(0.0)KS(0.99)PEK K:TMT10,s:Phosphorylated S AP3D1 137789.5 29 6 513.1 286.98 HUMAN 1 -2.14 -45.0828 RNTRTPRTPRTPQLK-p Q6PKG0;T785-p RNTRTPRTPRTPQLK 0.0217780195589434 0.01553954473342 -0.89 -0.750333333333333 38.7407466928289 25.0016620918218 -0.89 -0.750333333333333 0.000133636573225552 0.00316106765395801 -9.60041654025135 -5.03790925547141 Q6PKG0 LARP1 Q6PKG0.T785.p_LARP1 Q6PKG0_T785t _1_1_785_785 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5628.5628.2 8.22 8.22 1.574 2 1 1 0 625.3469 1169.7204 T785t Hydrogen 785 (R) tPRTPQLK (D) T(0.99)PRT(0.0)PQLK K:TMT10-Lys-Only,t:Phosphorylated T LARP1 123907.4 3 56 28.1 931.95 HUMAN 1 -38.7407 -25.0017 RNVKPSQTPQPKDK_-p Q96HR9-2;T178-p RNVKPSQTPQPKDK_ 0.599146623555677 0.00134344590831299 -0.0766666666666667 -0.973 4.11135576965203 46.6705478295424 -0.0766666666666667 -0.973 0.388029213091734 2.15251019476674e-05 -0.938356388788532 -13.580823142377 Q96HR9 REEP6 Q96HR9.2.T178.p_REEP6 Q96HR9-2_T178t _1_1_178_178 Q96HR9-2 Q96HR9-2 Isoform 2 of Receptor expression-enhancing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8066.8066.3 12.77 9.87 2.798 2 1 1 0 664.382 1911.1631 T178t TMT10 172 (R) NVKPSQtPQPK (D) NVKPS(0.0)QT(0.99)PQPK K:TMT10,t:Phosphorylated T REEP6 20904 6 2 4712.1 27.6 HUMAN 1 -4.1114 -46.6705 RNVPQEESLEDSDVD-p O00505;S56-p RNVPQEESLEDSDVD 0.103158959778694 0.144653662962401 -0.356333333333333 0.159333333333333 20.8233090864059 11.0602883217428 -0.356333333333333 0.159333333333333 0.00827311557343864 0.0783377633746608 -4.05791172483447 2.16569216367922 O00505 KPNA3 O00505.S56.p_KPNA3 O00505_S56sS60s_2_2_56_60 O00505 O00505 Importin subunit alpha-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22011.22011.3 13.48 13.48 99 2 2 2 0 885.7239 2495.219 S56s S60s TMT10 50 (R) NVPQEEsLEDsDVDADFK (A) NVPQEES(1.0)LEDS(1.0)DVDADFK K:TMT10,s:Phosphorylated S KPNA3 58323.3 3 2 2592.1 77.29 HUMAN 1 -20.8233 11.0603 RNVPQKLSPHSKRPD-p Q12852-2;S533-p RNVPQKLSPHSKRPD 0.755115471714797 0.849081754034618 -0.0576666666666667 0.0193333333333333 2.33168585293211 0.998160445661807 -0.0576666666666667 0.0193333333333333 0.584563123223871 0.794664762016086 -0.58106477369821 0.27339001017807 Q12852 MAP3K12 Q12852.2.S533.p_MAP3K12 Q12852-2_S533s _1_1_533_533 Q12852-2 Q12852-2 Isoform 2 of Mitogen-activated protein kinase kinase kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8624.8624.4 11.85 11.85 4.464 2 1 1 0 501.2908 1922.179 S533s TMT10 527 (R) NVPQKLsPHSK (R) NVPQKLS(0.99)PHS(0.0)K K:TMT10,s:Phosphorylated S MAP3K12 97346.8 2 2 3813.1 42.56 HUMAN 1 -2.3317 0.9982 RNYGYNPSPVKPEGL-p Q15047;S1066-p RNYGYNPSPVKPEGL 0.260386657049657 0.00110103410174541 -0.181333333333333 -1.154 11.0765777456127 49.829090698698 -0.181333333333333 -1.154 0.0780444861321855 1.04013792124603e-05 -2.16953056465519 -15.5765627458418 Q15047 SETDB1 Q15047.S1066.p_SETDB1 Q15047_S1066s _1_1_1066_1066 Q15047 Q15047|Q15047-3 Histone-lysine N-methyltransferase SETDB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14329.14329.3 15.79 15.79 7.45 3 1 1 0 743.7204 2149.1806 S1066s TMT10 1060 (R) NYGYNPsPVKPEGLR (R) NY(0.0)GY(0.0)NPS(0.99)PVKPEGLR K:TMT10,s:Phosphorylated S SETDB1 145208.3 7 4 2410.1 84.76 HUMAN 1 -11.0766 -49.8291 RNYILSASASALWND-p Q9NR46;S205-p RNYILSASASALWND 0.741409981555911 0.188103342617803 -0.0536666666666667 0.138333333333333 2.46669239291206 9.54540461741517 -0.0536666666666667 0.138333333333333 0.566670703792216 0.111034908306252 -0.60984198295186 1.90209787551399 Q9NR46 SH3GLB2 Q9NR46.S205.p_SH3GLB2 Q9NR46_S205s _1_1_205_205 Q9NR46 Q9NR46-2|B7ZC38 Endophilin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.32897.32897.4 20.11 15.52 1.214 4 1 1 0 815.9117 3180.6577 S205s TMT10 199 (R) NYILSAsASALWNDEVDKAEQELR (V) NY(0.0)ILS(0.0)AS(0.99)AS(0.0)ALWNDEVDKAEQELR K:TMT10,s:Phosphorylated S SH3GLB2 44201.3 2 2 2345.1 87.15 HUMAN 1 -2.4667 9.5454 RNYNKQASEQNWANY-p P17302;S306-p RNYNKQASEQNWANY 0.0741090610494485 0.0439711539603473 -0.536 0.241666666666667 24.2389093480932 18.1688982318283 -0.536 0.241666666666667 0.00376798413197813 0.0152443944206931 -4.85356280603604 3.49363397370724 P17302 GJA1 P17302.S306.p_GJA1 P17302_S306s _1_1_306_306 P17302 P17302 Gap junction alpha-1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11842.11842.2 15.14 15.14 9.308 3 1 1 0 1102.9807 2124.9896 S306s TMT10 304 (K) QAsEQNWANYSAEQNR (M) QAS(0.99)EQNWANY(0.0)S(0.0)AEQNR s:Phosphorylated S GJA1 43521.1 2 5 1330.1 153.26 HUMAN 1 -24.2389 18.1689 RPAALVYSQPEIREH-p Q16825;S492-p RPAALVYSQPEIREH 0.566954789947018 0.780802191147751 -0.0816666666666667 0.033 4.5405521810595 1.48723356975157 -0.0816666666666667 0.033 0.351515744432863 0.710029908808919 -1.01914583568044 0.391952405194294 Q16825 PTPN21 Q16825.S492.p_PTPN21 Q16825_S492s _1_1_492_492 Q16825 Q16825 Tyrosine-protein phosphatase non-receptor type 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22583.22583.4 26.04 26.04 7.349 7 1 1 0 745.3806 2898.5311 S492s TMT10 474 (R) NLNIGSSYAYSRPAALVYsQPEIR (E) NLNIGS(0.0)S(0.0)Y(0.0)AY(0.0)S(0.0)RPAALVY(0.0)S(0.99)QPEIR s:Phosphorylated S PTPN21 134191.5 2 1 762.1 229.75 HUMAN 1 -4.5406 1.4872 RPAEATSSPTSPERP-p Q9BU76;S217-p RPAEATSSPTSPERP 0.145152146047681 0.885635217912888 0.328666666666667 0.0196666666666667 17.092358643561 0.741387024010217 0.328666666666667 0.0196666666666667 0.019532783465827 0.843065461506488 3.28084781809134 0.207667962577835 Q9BU76 C1orf35 Q9BU76.S217.p_C1orf35 Q9BU76_S217s _1_1_217_217 Q9BU76 Q9BU76 Multiple myeloma tumor-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3918.3918.5 8.66 8.66 1.818 5 1 1 0 410.4081 1968.046 S217s TMT10 210 (R) RPAEATSsPTSPERPR (H) RPAEAT(0.0)S(0.0)S(0.99)PT(0.0)S(0.0)PERPR s:Phosphorylated S MMTAG2 29696.6 4 4 2785.1 70.71 HUMAN 1 17.0924 0.7414 RPAGGRPSPSAMGKR-p Q92615;S718-p RPAGGRPSPSAMGKR 0.21300200203599 0.0249410853666206 -0.209666666666667 -0.513333333333333 12.9585879557677 21.8111502150043 -0.209666666666667 -0.513333333333333 0.0505989150144749 0.00658999338269066 -2.50360736547095 -4.27440717237009 Q92615 LARP4B Q92615.S718.p_LARP4B Q92615_S718s _1_1_718_718 Q92615 Q92615 La-related protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.4536.4536.4 9.28 7.97 1.411 2 1 1 0 577.3044 2226.229 S718s TMT10 708 (R) DQRRPAGGRPsPSAMGK (R) DQRRPAGGRPS(0.99)PS(0.0)AMGK K:TMT10,s:Phosphorylated S LARP4B 80949.9 13 11 332.1 357.69 HUMAN 1 -12.9586 -21.8112 RPAPRAPSASPLALH-p Q8N3F8;S484-p RPAPRAPSASPLALH 0.248491641321601 0.378182026453703 0.275333333333333 0.110333333333333 11.5495361656374 5.60965700434109 0.275333333333333 0.110333333333333 0.0699916744384952 0.274811118394777 2.2526800683947 1.21442946501073 Q8N3F8 MICALL1 Q8N3F8.S484.p_MICALL1 Q8N3F8_S484sS486s_2_2_484_486 Q8N3F8 Q8N3F8 MICAL-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13141.13141.3 12.88 12.88 12.883 3 2 2 0 556.2695 1506.859 S484s S486s TMT10 482 (R) APsAsPLALHASR (L) APS(0.99)AS(0.99)PLALHAS(0.0)R s:Phosphorylated S MICALL1 94409.4 2 13 755.1 231.25 HUMAN 1 11.5495 5.6097 RPASVPPSPSLSRHS-p P13807;S645-p RPASVPPSPSLSRHS 0.871036397965817 0.0827361607772573 0.029 0.213 1.17447076354123 14.3338881342437 0.029 0.213 0.763049871667604 0.0368647409610671 0.317087632816797 2.75273040954965 P13807 GYS1 P13807.S645.p_GYS1 P13807_S641sS645s_2_2_641_645 P13807 P13807|P13807-2 Glycogen [starch] synthase, muscle HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19632.19632.4 12.01 12.01 1.466 8 2 2 0 1074.248 4134.0307 S641s S645s TMT10 616 (K) AFPEHFTYEPNEADAAQGYRYPRPAsVPPsPSLSR (H) AFPEHFT(0.0)Y(0.0)EPNEADAAQGY(0.0)RY(0.0)PRPAS(0.99)VPPS(0.99)PS(0.0)LS(0.0)R s:Phosphorylated S GYS1 84582.8 10 7 1394.1 146.91 HUMAN 1 1.1745 14.3339 RPDDRYDTPTSKKKV-p Q9BYW2;T2101-p RPDDRYDTPTSKKKV 0.427328335550124 0.00339997254298751 0.236666666666667 -0.690666666666667 6.80175202972809 36.9059630675861 0.236666666666667 -0.690666666666667 0.208845343751507 0.000203893646612219 1.42626435436343 -8.82307385291783 Q9BYW2 SETD2 Q9BYW2.T2101.p_SETD2 Q9BYW2_T2101t _1_1_2101_2101 Q9BYW2 Q9BYW2 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.4933.4933.5 11.12 5.02 1.253 5 1 1 0 501.6684 2424.345 T2101t TMT10 2091 (R) GTKRPDDRYDtPTSK (K) GT(0.0)KRPDDRY(0.0)DT(0.99)PT(0.0)S(0.0)K K:TMT10,t:Phosphorylated T SETD2 290615.4 2 28 58.1 711.11 HUMAN 1 6.8018 -36.906 RPDHSGGSPSPPTSE-p Q8TAD8;S52-p RPDHSGGSPSPPTSE 0.647342264442296 0.0540543139764796 -0.084 0.249333333333333 3.53819875080186 16.8919814640325 -0.084 0.249333333333333 0.442771975270311 0.0204551116146377 -0.827758189494677 3.23894132922654 Q8TAD8 SNIP1 Q8TAD8.S52.p_SNIP1 Q8TAD8_S52s _1_1_52_52 Q8TAD8 Q8TAD8 Smad nuclear-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4034.4034.3 19.14 14.68 2.197 5 1 1 0 714.3372 2061.0311 S52s TMT10 45 (R) RPDHSGGsPSPPTSEPAR (S) RPDHS(0.0)GGS(0.99)PS(0.0)PPT(0.0)S(0.0)EPAR s:Phosphorylated S SNIP1 45833.8 3 2 1038.1 185.39 HUMAN 1 -3.5382 16.892 RPDPEPVSDNEEDSY-p G3V1L9;S125-p RPDPEPVSDNEEDSY 0.514530931412314 0.0557983520109645 0.089 0.246666666666667 5.32824856604914 16.6980754275327 0.089 0.246666666666667 0.293207546178024 0.021389097356236 1.163885626502 3.20101723958936 G3V1L9 TJP1 G3V1L9.S125.p_TJP1 G3V1L9_S125s _1_1_125_125 G3V1L9 G3V1L9|Q07157|G5E9E7|A0A087X0K9|Q07157-2|H0YKB1 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15417.15417.5 22.68 22.68 2.071 4 1 1 0 806.7885 3949.9456 S125s TMT10 111 (K) KVQIPVSRPDPEPVsDNEEDSYDEEIHDPR (S) KVQIPVS(0.0)RPDPEPVS(0.99)DNEEDS(0.0)Y(0.0)DEEIHDPR K:TMT10,s:Phosphorylated S TJP1 197797.8 6 39 41.2 827.72 HUMAN 1 5.3282 16.6981 RPDPQGGSPGLRPPI-p B0QXZ6;S125-p RPDPQGGSPGLRPPI 0.582849044638515 0.839331208046422 -0.0776666666666667 -0.026 4.31309474622008 1.06961649761696 -0.0776666666666667 -0.026 0.370416671885987 0.781696829034536 -0.976524519302069 -0.291222011887578 B0QXZ6 CBX6 B0QXZ6.S125.p_CBX6 B0QXZ6_S125s _1_1_125_125 B0QXZ6 O95503|B0QXZ6 Chromobox protein homolog 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17682.17682.4 13.48 7.66 5.7 4 1 1 0 805.6819 3139.7326 S125s TMT10 114 (R) RPLPRPDPQGGsPGLRPPISPFSETVR (I) RPLPRPDPQGGS(0.99)PGLRPPIS(0.0)PFS(0.0)ET(0.0)VR s:Phosphorylated S CBX6 42145.5 2 2 1678.1 121.53 HUMAN 1 -4.3131 -1.0696 RPEAEPPSPPSGDLR-p Q8WUA7;S132-p RPEAEPPSPPSGDLR 0.491927851699248 0.0827361607772573 0.0943333333333333 0.201666666666667 5.67230190925606 14.333658769877 0.0943333333333333 0.201666666666667 0.270875551828235 0.0368666879536263 1.22595924838504 2.75268806815352 Q8WUA7 TBC1D22A Q8WUA7.S132.p_TBC1D22A Q8WUA7_S132s _1_1_132_132 Q8WUA7 Q8WUA7|A0A0A0MRY0|Q8WUA7-4|B0QYI1|Q8WUA7-2|Q8WUA7-3|F8WDP1 TBC1 domain family member 22A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12208.12413.5 24.04 18.39 3.12 3 1 1 0 772.4071 3778.04 S132s TMT10 109 (R) QGRPTLQEGPGLQQKPRPEAEPPsPPSGDLR (L) QGRPT(0.0)LQEGPGLQQKPRPEAEPPS(0.99)PPS(0.0)GDLR K:TMT10,s:Phosphorylated S TBC1D22A 59462.2 8 1 2448.1 83.12 HUMAN 1 5.6723 14.3337 RPEAQSLSPYTTSAN-p O94776;S435-p RPEAQSLSPYTTSAN 0.465076272777371 0.563392974355581 0.0993333333333333 0.0556666666666667 6.13585090937911 3.35810061676028 0.0993333333333334 0.0556666666666667 0.243452875813054 0.461519375536573 1.30872837984799 0.792134583762091 O94776 MTA2 O94776.S435.p_MTA2 O94776_S435s _1_1_435_435 O94776 O94776|O94776-2 Metastasis-associated protein MTA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8843.8843.4 12.46 12.46 1.63 7 1 1 0 621.0578 2401.2422 S435s TMT10 424 (R) GHLSRPEAQSLsPYTTSANR (A) GHLS(0.0)RPEAQS(0.0)LS(0.99)PY(0.0)T(0.0)T(0.0)S(0.0)ANR s:Phosphorylated S MTA2 75763.5 4 3 2100.1 97.64 HUMAN 1 6.1359 3.3581 RPEEGKQSPPPQPWG-p Q96EP1;S10-p RPEEGKQSPPPQPWG 0.206108312152609 0.358471607988196 0.195 0.095 13.2659925616869 5.910948314786 0.195 0.095 0.0471412119775853 0.256392412320201 2.55910966761456 1.26838593867017 Q96EP1 CHFR Q96EP1.S10.p_CHFR Q96EP1_S10s _1_1_10_10 Q96EP1 Q96EP1|Q96EP1-4|Q96EP1-2|Q96EP1-3|Q96EP1-5 E3 ubiquitin-protein ligase CHFR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13126.13126.3 13.16 7.57 99 1 1 1 0 819.7249 2377.192 S10s Acetyl 1 (-) MERPEEGKQsPPPQPWGR (L) MERPEEGKQS(1.0)PPPQPWGR K:TMT10,s:Phosphorylated S CHFR 75439.2 3 1 3382.1 52.35 HUMAN 1 13.266 5.9109 RPEEQMESDNCSGGD-p Q13501;S328-p RPEEQMESDNCSGGD 0.223384438939749 0.00597952894292079 -0.221333333333333 -0.490333333333333 12.5080559677747 32.1102025864062 -0.221333333333333 -0.490333333333333 0.0561299174134492 0.000615148177073544 -2.42278748874436 -7.08846286251496 Q13501 SQSTM1 Q13501.S328.p_SQSTM1 Q13501_S328sS332s_2_2_328_332 Q13501 Q13501|Q13501-2 Sequestosome-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21438.21438.4 22.75 22.75 4.825 6 2 2 0 1025.1858 3937.7857 S328s S332s TMT10 314 (K) IALESEGRPEEQMEsDNCsGGDDDWTHLSSK (E) IALES(0.0)EGRPEEQMES(0.99)DNCS(0.99)GGDDDWT(0.0)HLS(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SQSTM1 48485.1 8 17 541.1 276.49 HUMAN 1 -12.5081 -32.1102 RPEEVLPSPTLQSLA-p I3L2J0;S2279-p RPEEVLPSPTLQSLA 0.862721178211236 0.0872678702559474 0.0383333333333333 0.323333333333333 1.25210333311305 14.0229547730891 0.0383333333333333 0.323333333333333 0.749531115739682 0.0396008513575617 0.335972857022388 2.69551380538028 I3L2J0 NotFound I3L2J0.S2279.p_NotFound I3L2J0_S2279s _1_1_2279_2279 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30246.30246.3 13.94 13.94 2.131 5 1 1 0 997.8334 2911.52 S2279s Hydrogen 2265 (R) FAELPEFRPEEVLPsPTLQSLATSPR (A) FAELPEFRPEEVLPS(0.99)PT(0.0)LQS(0.0)LAT(0.0)S(0.0)PR s:Phosphorylated S CIC 259056.7 4 38 23.1 999.57 HUMAN 1 1.2521 14.023 RPEGGSPSPAGTPPQ-p Q9BR39;S486-p RPEGGSPSPAGTPPQ 0.53494190060823 0.960792474264386 0.0876666666666667 -0.00599999999999999 5.02901332255629 0.250285125926657 0.0876666666666667 -0.006 0.314122226985761 0.9439988982025 1.10937231323359 -0.0735588767476041 Q9BR39 JPH2 Q9BR39.S486.p_JPH2 Q9BR39_S486sT490t_2_2_486_490 Q9BR39 Q9BR39 Junctophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7788.7788.3 13.12 11.11 1.524 4 2 2 0 792.6996 2216.1509 S486s T490t Hydrogen 476 (R) ETPRPEGGSPsPAGtPPQPK (R) ET(0.0)PRPEGGS(0.0)PS(0.99)PAGT(0.99)PPQPK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T JPH2 74448.4 5 11 1028.1 186.58 HUMAN 1 5.029 -0.2503 RPEKRQQSLGGFFKG-p O75363;S552-p RPEKRQQSLGGFFKG 0.25414491835742 0.197713261865413 -0.211 0.171333333333333 11.3320835358655 9.26186633660601 -0.211 0.171333333333333 0.0735853985478404 0.118525928551803 -2.2143931209128 1.85301520606622 O75363 BCAS1 O75363.S552.p_BCAS1 O75363_S552s _1_1_552_552 O75363 O75363-2|G3XAF7 Breast carcinoma-amplified sequence 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17837.17837.3 10.17 10.17 99 1 1 1 0 569.3114 1625.9528 S552s TMT10 549 (K) RQQsLGGFFK (G) RQQS(1.0)LGGFFK K:TMT10,s:Phosphorylated S BCAS1 61993.1 1 4 3655.1 46.01 HUMAN 1 -11.3321 9.2619 RPEPEAASPTTRTRP-p Q86WB0;S370-p RPEPEAASPTTRTRP 0.597678517169112 0.013916377534992 -0.085 -0.377666666666667 4.13011011808357 25.7643885175296 -0.085 -0.377666666666667 0.386357180601788 0.00265192445514705 -0.941919974713682 -5.23322108573139 Q86WB0 ZC3HC1 Q86WB0.S370.p_ZC3HC1 Q86WB0_S370s _1_1_370_370 Q86WB0 Q86WB0|Q86WB0-2|C9J0I9 Nuclear-interacting partner of ALK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11643.11643.3 18.52 18.52 1.931 7 1 1 0 861.0637 2501.2106 S370s TMT10 354 (R) SWDSSSPVDRPEPEAAsPTTR (T) S(0.0)WDS(0.0)S(0.0)S(0.0)PVDRPEPEAAS(0.99)PT(0.0)T(0.0)R s:Phosphorylated S ZC3HC1 56401.6 5 9 624.1 258.98 HUMAN 1 -4.1301 -25.7644 RPESASDSDT_____-p Q9Y3B9;S280-p RPESASDSDT_____ 0.153650540414552 0.0115830568386836 -0.375 0.725 16.347082676625 27.0902876560335 -0.375 0.725 0.0231895185620665 0.00195421001390084 -3.13512067742828 5.58567492777792 Q9Y3B9 RRP15 Q9Y3B9.S280.p_RRP15 Q9Y3B9_S278sS280s_2_2_278_280 Q9Y3B9 Q9Y3B9 RRP15-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4681.4681.3 11.1 11.1 1.419 6 2 2 0 752.6082 2095.8737 S278s S280s TMT10 265 (K) ESDGPDDSRPESAsDsDT (-) ES(0.0)DGPDDS(0.0)RPES(0.0)AS(0.99)DS(0.99)DT(0.0) s:Phosphorylated S RRP15 31654.8 1 5 2423.1 84.16 HUMAN 1 -16.3471 27.0903 RPETQGQSWTRDASR-p X6RAB3;S774-p RPETQGQSWTRDASR 0.887864083220312 0.0430524791563996 0.0233333333333333 -0.248666666666667 1.00570929012956 18.3012568715678 0.0233333333333333 -0.248666666666667 0.793284686871944 0.014786803881883 0.275309930242284 -3.52054930959604 X6RAB3 NotFound X6RAB3.S774.p_NotFound X6RAB3_S774s _1_1_774_774 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18580.18580.3 14.67 14.67 1.166 9 1 1 0 924.4279 2691.3001 S774s TMT10 758 (R) TWSEVSYTYRPETQGQsWTR (D) T(0.0)WS(0.0)EVS(0.0)Y(0.0)T(0.0)Y(0.0)RPET(0.0)QGQS(0.99)WT(0.0)R s:Phosphorylated S USP6NL 96835.5 2 15 364.1 342.41 HUMAN 1 1.0057 -18.3013 RPFLYRRSPTDSDVS-p Q8N3V7-2;S854-p RPFLYRRSPTDSDVS 0.885891325309933 0.00990702550110924 -0.0416666666666667 0.549333333333333 1.03381452734156 28.1825816863502 -0.0416666666666667 0.549333333333333 0.788167544376319 0.0015196439008799 -0.282339069451911 5.88907195940499 Q8N3V7 SYNPO Q8N3V7.2.S854.p_SYNPO Q8N3V7-2_S854s _1_1_854_854 Q8N3V7-2 Q8N3V7-2 Isoform 2 of Synaptopodin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10270.10270.2 14.95 14.95 1.167 6 1 1 0 1009.9346 1938.8977 S854s Hydrogen 854 (R) sPTDSDVSLDSEDSGAK (S) S(0.99)PT(0.0)DS(0.0)DVS(0.0)LDS(0.0)EDS(0.0)GAK K:TMT10-Lys-Only,s:Phosphorylated S SYNPO 96794.1 1 15 947.1 196.99 HUMAN 1 -1.0338 28.1826 RPFTFSQSTPIGLDR-p Q96N96-6;S703-p RPFTFSQSTPIGLDR 0.643642555621903 0.63944412364079 0.0656666666666667 -0.06 3.57778243165646 2.64515951838046 0.0656666666666667 -0.06 0.43875467485844 0.54385615526434 0.835509919718099 -0.647285470060314 Q96N96 SPATA13 Q96N96.6.S703.p_SPATA13 Q96N96-6_S703s _1_1_703_703 Q96N96-6 Q96N96-6|A0A0A0MRY4|Q96N96-4 Isoform 6 of Spermatogenesis-associated protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25548.25548.3 10.32 8.73 1.198 4 1 1 0 726.7026 2098.1283 S703s TMT10 695 (R) FRPFTFSQsTPIGLDR (V) FRPFT(0.0)FS(0.0)QS(0.99)T(0.0)PIGLDR s:Phosphorylated S SPATA13 143201.7 2 3 3680.1 45.48 HUMAN 1 3.5778 -2.6452 RPFVRTDSIGEKLGR-p A0A286YFF8;S1215-p RPFVRTDSIGEKLGR 0.901377807990309 0.66030884046905 0.0183333333333333 -0.0646666666666667 0.885036701342469 2.46636743826318 0.0183333333333333 -0.0646666666666667 0.815635894330778 0.566713105705324 0.244787170473988 -0.6096958646056 A0A286YFF8 NotFound A0A286YFF8.S1215.p_NotFound A0A286YFF8_S1215s _1_1_1215_1215 A0A286YFF8 A0A286YFF8|Q7Z3U7|Q7Z3U7-5|Q7Z3U7-6|Q7Z3U7-2|Q7Z3U7-3 Protein MON2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9766.9766.2 12.59 12.59 1.383 2 1 1 0 779.3981 1477.8212 S1215s Hydrogen 1209 (R) PFVRTDsIGEK (L) PFVRT(0.0)DS(0.99)IGEK K:TMT10-Lys-Only,s:Phosphorylated S MON2 192594.7 14 5 1105.1 176.81 HUMAN 1 0.885 -2.4664 RPFYRASSFLDTSKD-p F5H269;S1896-p RPFYRASSFLDTSKD 0.139456423677268 0.9257979254086 -0.325333333333333 0.0116666666666667 17.5077191469367 0.47311145643256 -0.325333333333333 0.0116666666666667 0.0177512150478014 0.896786071489058 -3.36331329417004 0.135923097025638 F5H269 DMXL1 F5H269.S1896.p_DMXL1 F5H269_S1896s _1_1_1896_1896 F5H269 F5H269|Q9Y485 DmX-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17392.17392.2 11.33 11.33 1.102 4 1 1 0 747.3859 1413.799 S1896s TMT10 1894 (R) ASsFLDTSK (D) AS(0.0)S(0.99)FLDT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S DMXL1 344060.7 2 11 523.1 283.18 HUMAN 1 -17.5077 0.4731 RPGAPSLSPAPRSGE-p Q5QP82-2;S63-p RPGAPSLSPAPRSGE 0.213229385106179 0.0616646994700244 0.196 0.214666666666667 12.9461721636928 16.1096864749612 0.196 0.214666666666667 0.0507437762755346 0.0244924005053024 2.50137194464517 3.08707977600121 Q5QP82 DCAF10 Q5QP82.2.S63.p_DCAF10 Q5QP82-2_S63s _1_1_63_63 Q5QP82-2 Q5QP82|Q5QP82-2 Isoform 2 of DDB1- and CUL4-associated factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5361.5361.3 13.13 13.13 2.863 2 1 1 0 429.2186 1205.6749 S63s Hydrogen 56 (R) RPGAPSLsPAPR (S) RPGAPS(0.0)LS(0.99)PAPR s:Phosphorylated S DCAF10 57709 4 1 2092.1 97.98 HUMAN 1 12.9462 16.1097 RPGARDKSPAPEEKG-p Q6DT37;S1462-p RPGARDKSPAPEEKG 0.0521538298795559 0.549785838569211 0.483 -0.101 27.8613236341304 3.49684271855801 0.483 -0.101 0.00163631773174039 0.447008445134074 5.80691092061068 -0.819513403746363 Q6DT37 CDC42BPG Q6DT37.S1462.p_CDC42BPG Q6DT37_S1462s _1_1_1462_1462 Q6DT37 Q6DT37 Serine/threonine-protein kinase MRCK gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6609.6609.3 10.48 10.48 99 1 1 1 0 589.9891 1687.9834 S1462s TMT10 1460 (R) DKsPAPEEK (G) DKS(1.0)PAPEEK K:TMT10,s:Phosphorylated S CDC42BPG 173882.5 4 5 997.1 190.4 HUMAN 1 27.8613 -3.4968 RPGCQPSSPCVPKLS-p O14545;S480-p RPGCQPSSPCVPKLS 0.766531584549804 0.0251035401475302 0.051 -0.374333333333333 2.21432605440405 21.7747533103046 0.051 -0.374333333333333 0.600575199962062 0.00664545419611469 0.55575978811421 -4.26615844591343 O14545 TRAFD1 O14545.S480.p_TRAFD1 O14545_S480s _1_1_480_480 O14545 O14545 TRAF-type zinc finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8464.8464.3 10.58 6.84 1.341 5 1 1 0 813.0637 2357.2106 S480s TMT10 468 (R) STSGPRPGCQPSsPCVPK (L) S(0.0)T(0.0)S(0.0)GPRPGCQPS(0.0)S(0.99)PCVPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TRAFD1 66266.3 5 5 2541.1 79.18 HUMAN 1 2.2143 -21.7748 RPGDLPPSPDDVKRR-p O75382;S427-p RPGDLPPSPDDVKRR 0.602317144656904 0.725175445104735 0.0696666666666667 -0.034 4.0664464469846 1.92178147068333 0.0696666666666667 -0.034 0.392062545517142 0.642424141659848 0.929809770476863 -0.491353216854056 O75382 TRIM3 O75382.S427.p_TRIM3 O75382_S427s _1_1_427_427 O75382 O75382|O75382-2|A0A1W2PPI7|O75382-3|O75382-4 Tripartite motif-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15982.16733.3 17.04 17.04 99 1 1 1 0 705.7138 2035.1588 S427s TMT10 418 (R) ALRPGDLPPsPDDVK (R) ALRPGDLPPS(1.0)PDDVK K:TMT10,s:Phosphorylated S TRIM3 81912.1 20 2 1265.1 160.44 HUMAN 1 4.0664 -1.9218 RPGEATLSC______-p P57081;S411-p RPGEATLSC______ 0.175126391202982 0.215541018358196 0.223333333333333 0.122 15.0669150757758 8.77061444352289 0.223333333333333 0.122 0.0311392746796055 0.132720667011855 2.89101059834769 1.7680376224307 P57081 WDR4 P57081.S411.p_WDR4 P57081_S411s _1_1_411_411 P57081 P57081|P57081-2|P57081-3 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9334.9334.3 11.46 11.46 6.909 2 1 1 0 596.6368 1707.9286 S411s TMT10 402 (K) KMRPGEATLsC (-) KMRPGEAT(0.0)LS(0.99)C K:TMT10,C:Carbamidomethylation,s:Phosphorylated S WDR4 46230.6 3 2 2090.1 97.98 HUMAN 1 15.0669 8.7706 RPGGKTGSGGVASSS-p Q15428;S13-p RPGGKTGSGGVASSS 0.502812376540683 0.467006854358302 0.092 0.0996666666666667 5.50807454086323 4.40850054873577 0.092 0.0996666666666667 0.281314777245105 0.362368088539287 1.19640454252642 0.994271577798855 Q15428 SF3A2 Q15428.S13.p_SF3A2 Q15428_S13s _1_1_13_13 Q15428 Q15428 Splicing factor 3A subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4541.4541.2 11.5 11.5 2.158 6 1 1 0 802.8591 1524.7451 S13s TMT10 11 (K) TGsGGVASSSESNR (D) T(0.0)GS(0.99)GGVAS(0.0)S(0.0)S(0.0)ES(0.0)NR s:Phosphorylated S SF3A2 49368.8 1 1 4199.1 35.56 HUMAN 1 5.5081 4.4085 RPGNFSHSLDMKSGP-p O00400;S22-p RPGNFSHSLDMKSGP 0.139309018176778 0.294742794505295 -0.312666666666667 -0.109666666666667 17.5165733400981 7.00492590197837 -0.312666666666667 -0.109666666666667 0.0177150615657554 0.199300050985144 -3.36508127192653 -1.46147138282016 O00400 SLC33A1 O00400.S22.p_SLC33A1 O00400_S22s _1_1_22_22 O00400 O00400 Acetyl-coenzyme A transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10737.10737.4 15.11 10.57 4.42 2 1 1 0 482.4965 1846.9998 S22s TMT10 15 (R) RPGNFSHsLDMK (S) RPGNFS(0.0)HS(0.99)LDMK K:TMT10,s:Phosphorylated S SLC33A1 61421.3 5 2 4760.1 26.96 HUMAN 1 -17.5166 -7.0049 RPGRTSDSPWFLSGS-p O95071;S110-p RPGRTSDSPWFLSGS 0.325306077824017 0.66239093090053 0.172333333333333 -0.062 9.1342746956872 2.44974755554777 0.172333333333333 -0.062 0.122059765267321 0.568885997794092 1.83160907340858 -0.606172406104799 O95071 UBR5 O95071.S110.p_UBR5 O95071_S110s _1_1_110_110 O95071 O95071|O95071-2|E7EMW7 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25986.25986.3 14.6 14.6 1.191 6 1 1 0 683.6568 1968.9864 S110s TMT10 107 (R) TSDsPWFLSGSETLGR (L) T(0.0)S(0.0)DS(0.99)PWFLS(0.0)GS(0.0)ET(0.0)LGR s:Phosphorylated S UBR5 312542 3 1 80.1 636.57 HUMAN 1 9.1343 -2.4497 RPGTRRESLGLESKD-p Q96BH1;S450-p RPGTRRESLGLESKD 0.142551392436685 0.352824505264303 -0.308333333333333 -0.228333333333333 17.2822950206162 5.99773270863829 -0.308333333333333 -0.228333333333333 0.0186969384323648 0.251319813716673 -3.31844368500218 -1.28385436204827 Q96BH1 RNF25 Q96BH1.S450.p_RNF25 Q96BH1_S450s _1_1_450_450 Q96BH1 Q96BH1 E3 ubiquitin-protein ligase RNF25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11035.11035.3 9.47 9.47 9.474 2 1 1 0 519.6206 1476.8786 S450s TMT10 448 (R) REsLGLESK (D) RES(0.99)LGLES(0.0)K K:TMT10,s:Phosphorylated S RNF25 51845.3 2 2 3651.1 46.07 HUMAN 1 -17.2823 -5.9977 RPHRGELSPSFLNPP-p E9PGC8;S2687-p RPHRGELSPSFLNPP 0.926174294973416 0.206319195334453 -0.0176666666666667 -0.132333333333333 0.657533804216798 9.01783717969758 -0.0176666666666667 -0.132333333333333 0.859501461655173 0.125376540441703 -0.185621210252812 -1.8107978828687 E9PGC8 NotFound E9PGC8.S2687.p_NotFound E9PGC8_S2687s _1_1_2687_2687 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28719.28719.3 11.1 11.1 1.613 5 1 1 0 1097.208 3209.6528 S2687s TMT10 2684 (R) GELsPSFLNPPLPPSIDDRDLSTEEVR (L) GELS(0.99)PS(0.0)FLNPPLPPS(0.0)IDDRDLS(0.0)T(0.0)EEVR s:Phosphorylated S MAP1A 332906.7 4 40 20.1 1016.98 HUMAN 1 -0.6575 -9.0178 RPIERSQSPVHLRRP-p Q96T58;S727-p RPIERSQSPVHLRRP 0.12656840713573 0.003987334905569 0.43 0.741333333333333 18.6495638688083 35.3701493412741 0.43 0.741333333333333 0.0136472017889042 0.000290392279526645 3.59493837678443 8.23148140485563 Q96T58 SPEN Q96T58.S727.p_SPEN Q96T58_S727s _1_1_727_727 Q96T58 Q96T58 Msx2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5655.5655.3 9.93 9.93 1.89 2 1 1 0 411.5498 1152.6687 S727s TMT10 725 (R) SQsPVHLR (R) S(0.0)QS(0.99)PVHLR s:Phosphorylated S SPEN 403267.9 1 4 2199.1 93.72 HUMAN 1 18.6496 35.3701 RPITTGNSPPRYRLL-p P27694;S38-p RPITTGNSPPRYRLL 0.249157518555538 0.011926040774687 0.166 0.480333333333333 11.5176676101329 26.8786893527559 0.166 0.480333333333333 0.0705071627865765 0.00205178128771717 2.24706257389966 5.52828948644303 P27694 RPA1 P27694.S38.p_RPA1 P27694_S38s _1_1_38_38 P27694 P27694 Replication protein A 70 kDa DNA-binding subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25868.25868.5 13.15 13.15 2.229 5 1 1 0 715.2048 3492.0215 S38s TMT10 17 (K) GDTNIKPILQVINIRPITTGNsPPRYR (L) GDT(0.0)NIKPILQVINIRPIT(0.0)T(0.0)GNS(0.99)PPRY(0.0)R K:TMT10,s:Phosphorylated S RPA1 68764.6 4 1 1852.1 110.98 HUMAN 1 11.5177 26.8787 RPKAVTFSPDLGPVP-p Q9P1Y5;S685-p RPKAVTFSPDLGPVP 0.262604390656816 0.118687857455807 -0.169666666666667 0.192666666666667 11.0150949061067 12.2047035360008 -0.169666666666667 0.192666666666667 0.079157215625748 0.0601907349714406 -2.15875405653052 2.36749169931467 Q9P1Y5 CAMSAP3 Q9P1Y5.S685.p_CAMSAP3 Q9P1Y5_S685s _1_1_685_685 Q9P1Y5 Q9P1Y5-2 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22954.22954.3 20.92 20.92 2.412 3 1 1 0 855.4161 2484.2721 S685s TMT10 681 (K) AVTFsPDLGPVPHEGLGEYNR (A) AVT(0.0)FS(0.99)PDLGPVPHEGLGEY(0.0)NR s:Phosphorylated S CAMSAP3 135546 1 14 217.1 432.4 HUMAN 1 -11.0151 12.2047 RPKRQMRSPVKMKPP-p Q9NR48;S899-p RPKRQMRSPVKMKPP 0.217253177036105 0.00273649503124045 0.423 -0.993666666666667 12.7729982547829 38.8594386661384 0.423 -0.993666666666667 0.0528080552987428 0.000130033763828004 2.47024175493451 -9.63000112684217 Q9NR48 ASH1L Q9NR48.S899.p_ASH1L Q9NR48_S899s _1_1_899_899 Q9NR48 Q9NR48|Q9NR48-2 Histone-lysine N-methyltransferase ASH1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.6350.6350.3 8.21 4.37 99 1 1 1 0 461.9243 1303.792 S899s TMT10 896 (R) QMRsPVK (M) QMRS(1.0)PVK K:TMT10,s:Phosphorylated S ASH1L 336378.7 3 9 245.1 412 HUMAN 1 12.773 -38.8594 RPKVQVEYKGETKSF-p P11142;Y107-p RPKVQVEYKGETKSF 0.585907705398247 0.45083229458664 -0.0793333333333333 -0.0746666666666666 4.26957433418535 4.61218908958874 -0.0793333333333333 -0.0746666666666666 0.374147257835984 0.345765048771783 -0.968320850270918 -1.03228968586373 P11142 HSPA8 P11142.Y107.p_HSPA8 P11142_Y107y _1_1_107_107 P11142 P11142|P54652|E9PKE3|P11142-2 Heat shock cognate 71 kDa protein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.12136.12175.3 14.3 14.3 1.664 2 1 1 0 650.0302 1868.1096 Y107y TMT10 103 (K) VQVEyKGETK (S) VQVEY(0.99)KGET(0.0)K K:TMT10,y:Phosphorylated Y HSPA8 71125 2 2 77.1 32.82 HUMAN 1 -4.2696 -4.6122 RPLARRKSELPQDPH-p Q13362;S497-p RPLARRKSELPQDPH 0.191584052886347 0.876754986878946 0.208 0.027 14.0076539632478 0.803296945143572 0.208 0.0270000000000001 0.0397406168291628 0.831132577522506 2.69432387732169 0.2237611647824 Q13362 PPP2R5C Q13362.S497.p_PPP2R5C Q13362_S497s _1_1_497_497 Q13362 Q13362-5|Q13362-4|Q13362-3 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6468.6468.5 14.28 12.09 8.383 2 1 1 0 512.9012 2480.5119 S497s TMT10 495 (R) RKsELPQDPHTKK (A) RKS(0.99)ELPQDPHT(0.0)KK K:TMT10,s:Phosphorylated S PPP2R5C 61459 3 2 2426.2 83.98 HUMAN 1 14.0077 0.8033 RPLARSASPPKAKNL-p P52701;S65-p RPLARSASPPKAKNL 0.0608498573638083 0.0101099102642081 1.29766666666667 -0.816 26.5485760603596 28.0218881439948 1.29766666666667 -0.816 0.00221382044527348 0.00157692553457288 5.44698142327449 -5.84366934137131 P52701 MSH6 P52701.S65.p_MSH6 P52701_S65s _1_1_65_65 P52701 P52701|P52701-3|P52701-2|A0A087WWJ1|F8WAX8|F8W7G9 DNA mismatch repair protein Msh6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6431.6638.3 10.33 10.33 2.355 2 1 1 0 518.3072 1472.9404 S65s TMT10 63 (R) SAsPPKAK (N) S(0.0)AS(0.99)PPKAK K:TMT10,s:Phosphorylated S MSH6 154608.6 7 6 875.1 209.27 HUMAN 1 26.5486 -28.0219 RPLEAQPSAPGHSVK-p Q9ULH7-5;S619-p RPLEAQPSAPGHSVK 0.245005563669872 0.143220511057626 -0.217333333333333 -0.344333333333333 11.6794415547226 11.1192446105089 -0.217333333333333 -0.344333333333333 0.0679290974838699 0.0772814992872439 -2.27560211365019 -2.17601992915304 Q9ULH7 MKL2 Q9ULH7.5.S619.p_MKL2 Q9ULH7-5_S619s _1_1_619_619 Q9ULH7-5 Q9ULH7-5|Q9ULH7-4 Isoform 5 of MKL/myocardin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5213.5213.4 12.24 12.24 5.279 2 1 1 0 678.1132 2629.4687 S619s TMT10 607 (K) RGQQQRPLEAQPsAPGHSVK (S) RGQQQRPLEAQPS(0.99)APGHS(0.0)VK K:TMT10,s:Phosphorylated S MKL2 119334.1 1 12 464.1 303.55 HUMAN 1 -11.6794 -11.1192 RPLERRLSPGSDIYV-p O43166;S1127-p RPLERRLSPGSDIYV 0.947625064272277 0.161256887101371 -0.0116666666666667 -0.155333333333333 0.463970133704029 10.4224073387487 -0.0116666666666667 -0.155333333333333 0.898675675190845 0.0907317455412435 -0.133429371882959 -2.05433160787118 O43166 SIPA1L1 O43166.S1127.p_SIPA1L1 O43166_S1127s _1_1_1127_1127 O43166 O43166|O43166-2|O43166-3|F5GYF8 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28034.28034.4 21.83 21.83 1.635 6 1 1 0 583.8034 2252.227 S1127s TMT10 1125 (R) RLsPGSDIYVTVSSMALAR (S) RLS(0.99)PGS(0.0)DIY(0.0)VT(0.0)VS(0.0)S(0.0)MALAR s:Phosphorylated S SIPA1L1 201223.1 7 12 46.1 777.88 HUMAN 1 -0.464 -10.4224 RPLGRTQSAPLPQNA-p P56524;S467-p RPLGRTQSAPLPQNA 0.815726627142776 0.454271938961351 0.039 -0.0883333333333333 1.69781561913205 4.56835339707723 0.039 -0.0883333333333333 0.676423111921656 0.349272715148818 0.440790147023227 -1.02413502452905 P56524 HDAC4 P56524.S467.p_HDAC4 P56524_S467s _1_1_467_467 P56524 P56524|P56524-2 Histone deacetylase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24253.24253.4 21.1 21.1 2.423 2 1 1 0 941.2509 3682.0229 S467s TMT10 465 (R) TQsAPLPQNAQALQHLVIQQQHQQFLEK (H) T(0.0)QS(0.99)APLPQNAQALQHLVIQQQHQQFLEK K:TMT10,s:Phosphorylated S HDAC4 119836.3 3 4 1282.1 158.68 HUMAN 1 1.6978 -4.5684 RPLKRRGSMEQAPAV-p Q8WUF5;S526-p RPLKRRGSMEQAPAV 0.297330507583042 0.0606818757947398 -0.192 0.227333333333333 9.91257866489916 16.2118916290165 -0.192 0.229319198033508 0.102033347108458 0.0239227354198498 -1.96652630598918 3.10675078187936 Q8WUF5 PPP1R13L Q8WUF5.S526.p_PPP1R13L Q8WUF5_S526s _1_1_526_526 Q8WUF5 Q8WUF5 RelA-associated inhibitor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8885.8885.5 19.31 17.2 19.308 2 1 1 0 569.1251 2761.6226 S526s TMT10 523 (K) RRGsMEQAPAVALPPTHKK (Q) RRGS(0.99)MEQAPAVALPPT(0.0)HKK K:TMT10,s:Phosphorylated S PPP1R13L 89431.8 4 19 371.1 339.39 HUMAN 1 -9.9126 16.2119 RPLLRSMSAAFCSLL-p Q13671;S351-p RPLLRSMSAAFCSLL 0.55149404590049 0.567117469582556 0.0966666666666667 0.06 4.76983473001468 3.32199809564916 0.0966666666666667 0.0600000000000001 0.333439101486939 0.465371936627776 1.06170521547113 0.7849710312844 Q13671 RIN1 Q13671.S351.p_RIN1 Q13671_S351s _1_1_351_351 Q13671 Q13671|Q13671-2|E9PNR2 Ras and Rab interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29723.29723.3 20.85 20.85 2.133 3 1 1 0 616.9584 1768.8923 S351s TMT10 349 (R) SMsAAFCSLLAPER (Q) S(0.0)MS(0.99)AAFCS(0.0)LLAPER C:Carbamidomethylation,s:Phosphorylated S RIN1 84953.2 8 3 2540.1 79.24 HUMAN 1 4.7698 3.322 RPLRLQRSPVLKRRP-p Q6F5E8;S1381-p RPLRLQRSPVLKRRP 0.895863012427936 0.150277269319722 0.0196666666666667 0.240666666666667 0.93500930815 10.8306386871797 0.0196666666666667 0.240666666666667 0.806304473216025 0.0825916478759921 0.257495795217206 2.12552306844614 Q6F5E8 RLTPR Q6F5E8.S1381.p_RLTPR Q6F5E8_S1381s _1_1_1381_1381 Q6F5E8 Q6F5E8|Q6F5E8-2 Capping protein, Arp2/3 and myosin-I linker protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11528.11528.3 9.72 7.53 99 1 1 1 0 493.6338 1398.9197 S1381s TMT10 1378 (R) LQRsPVLK (R) LQRS(1.0)PVLK K:TMT10,s:Phosphorylated S CARMIL2 156226.7 1 5 2015.1 102.3 HUMAN 1 0.935 10.8306 RPLRRIISVEEDPLP-p Q9BSW2-2;S473-p RPLRRIISVEEDPLP 0.879481914454382 0.0191094454160677 -0.0433333333333334 -0.467666666666667 1.09756228142568 23.6356949750476 -0.0433333333333333 -0.467666666666667 0.776682950668498 0.00432942780994101 -0.298174983151657 -4.70087938185125 Q9BSW2 CRACR2A Q9BSW2.2.S473.p_CRACR2A Q9BSW2-2_S473s _1_1_473_473 Q9BSW2-2 Q9BSW2-2 Isoform 2 of EF-hand calcium-binding domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37472.37472.4 17.5 16.11 9.996 2 1 1 0 766.4081 2982.644 S473s TMT10 471 (R) IIsVEEDPLPQLLDGGFEQPLSK (C) IIS(0.99)VEEDPLPQLLDGGFEQPLS(0.0)K K:TMT10,s:Phosphorylated S CRACR2A 83990.5 1 2 5182.1 22.09 HUMAN 1 -1.0976 -23.6357 RPLSIQDSFVEVSPV-p J3KNP4;S813-p RPLSIQDSFVEVSPV 0.434011055157773 0.146133867812973 0.159 -0.161 6.68034222760533 11.0024120987892 0.159 -0.161 0.21476612300001 0.0793887182334077 1.40493441609297 -2.15555987728254 J3KNP4 SEMA4B J3KNP4.S813.p_SEMA4B J3KNP4_S813s _1_1_813_813 J3KNP4 J3KNP4|Q9NPR2 Semaphorin-4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19055.19055.4 15.77 15.77 4.161 3 1 1 0 662.8456 2568.3918 S813s TMT10 806 (K) RPLSIQDsFVEVSPVCPRPR (V) RPLS(0.0)IQDS(0.99)FVEVS(0.0)PVCPRPR C:Carbamidomethylation,s:Phosphorylated S SEMA4B 94133.5 2 3 2228.1 92.61 HUMAN 1 6.6803 -11.0024 RPLSRAQSSPAAPAS-p Q8WUI4-8;S542-p RPLSRAQSSPAAPAS 0.564664126408835 0.0142372187802329 0.079 -0.428 4.57386502906002 25.6072074529246 0.079 -0.431566717520709 0.348829734241712 0.00274966163846757 1.02535362584283 -5.19253892330861 Q8WUI4 HDAC7 Q8WUI4.8.S542.p_HDAC7 Q8WUI4-8_S542s _1_1_542_542 Q8WUI4-8 Q8WUI4-8|J3KPH8|Q8WUI4-5|Q8WUI4-6|Q8WUI4-7|Q8WUI4-4|Q8WUI4-3|Q8WUI4-10 Isoform 8 of Histone deacetylase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12676.12676.2 14.31 11.49 1.146 5 1 1 0 1152.0641 2223.1567 S542s TMT10 540 (R) AQsSPAAPASLSAPEPASQAR (V) AQS(0.99)S(0.0)PAAPAS(0.0)LS(0.0)APEPAS(0.0)QAR s:Phosphorylated S HDAC7 109962.1 2 4 2445.1 83.2 HUMAN 1 4.5739 -25.6072 RPLSRPGSQECMDAA-p Q9NYQ7-2;S3106-p RPLSRPGSQECMDAA 0.675922624629322 0.420826921348439 0.065 -0.094 3.18812089396417 5.00347503995239 0.065 -0.094 0.479941064691859 0.315974835197825 0.758369500513639 -1.10447152911163 Q9NYQ7 CELSR3 Q9NYQ7.2.S3106.p_CELSR3 Q9NYQ7-2_S3106s _1_1_3106_3106 Q9NYQ7-2 Q9NYQ7-2 Isoform 2 of Cadherin EGF LAG seven-pass G-type receptor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16966.16966.4 12.92 12.92 1.119 2 1 1 0 920.9715 3600.8828 S3106s Hydrogen 3090 (R) LEEAPAPVLRPLSRPGsQECMDAAPGRLEPK (D) LEEAPAPVLRPLS(0.0)RPGS(0.99)QECMDAAPGRLEPK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S CELSR3 363540.1 3 4 1821.1 112.78 HUMAN 1 3.1881 -5.0035 RPLSSGFSPEEAQQQ-p Q9C0C2;S987-p RPLSSGFSPEEAQQQ 0.840992808957559 0.303010010226008 0.0313333333333333 -0.190333333333333 1.45261848959657 6.84664424237023 0.0313333333333333 -0.190333333333333 0.715711756358189 0.206697667474537 0.383852700697946 -1.43375403744646 Q9C0C2 TNKS1BP1 Q9C0C2.S987.p_TNKS1BP1 Q9C0C2_S987s _1_1_987_987 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20489.20489.4 15.02 15.02 1.55 5 1 1 0 842.8996 3288.6061 S987s TMT10 976 (R) SFGTRPLSSGFsPEEAQQQDEEFEK (K) S(0.0)FGT(0.0)RPLS(0.0)S(0.0)GFS(0.99)PEEAQQQDEEFEK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 3 39 4.1 2105.7 HUMAN 1 1.4526 -6.8466 RPLYPQISPLKIHIP-p P85037;S223-p RPLYPQISPLKIHIP 0.225942891288564 0.896104293953276 -0.484333333333333 0.016 12.4018176075113 0.669137366675457 -0.484333333333333 0.016 0.057519915483665 0.85720809441966 -2.40381538746106 0.188675702093246 P85037 FOXK1 P85037.S223.p_FOXK1 P85037_S223s _1_1_223_223 P85037 P85037|P85037-2 Forkhead box protein K1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24978.24978.3 17.48 17.48 5.95 3 1 1 0 882.1552 2564.4852 S223s TMT10 208 (K) EEAPASPLRPLYPQIsPLK (I) EEAPAS(0.0)PLRPLY(0.0)PQIS(0.99)PLK K:TMT10,s:Phosphorylated S FOXK1 75912.4 3 3 686.1 243.66 HUMAN 1 -12.4018 0.6691 RPMRKRLSAPELRLS-p Q7Z465;S88-p RPMRKRLSAPELRLS 0.642636606553244 0.0384394477566116 0.0676666666666667 0.277 3.5900343506386 19.0125490509141 0.0676666666666667 0.277 0.437518644579106 0.0125529296494291 0.83790556778731 3.66694696766835 Q7Z465 BNIPL Q7Z465.S88.p_BNIPL Q7Z465_S88s _1_1_88_88 Q7Z465 Q7Z465|Q7Z465-2 Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10068.10068.4 8.77 8.77 99 1 1 1 0 402.7403 1527.9735 S88s TMT10 85 (R) KRLsAPELR (L) KRLS(1.0)APELR K:TMT10,s:Phosphorylated S BNIPL 39940.2 5 2 3518.1 49.24 HUMAN 1 3.59 19.0125 RPMRKSFSQPGLRSL-p Q86TI0-2;S237-p RPMRKSFSQPGLRSL 0.53850328576255 0.1011105901973 0.117666666666667 -0.190333333333333 4.96951333947179 13.1486372834939 0.117666666666667 -0.190333333333333 0.318455435565777 0.0484324313608939 1.09846827799998 -2.53647464921068 Q86TI0 TBC1D1 Q86TI0.2.S237.p_TBC1D1 Q86TI0-2_S237s _1_1_237_237 Q86TI0-2 Q86TI0|Q86TI0-2 Isoform 2 of TBC1 domain family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12064.12064.2 11.73 4.88 2.721 2 1 1 0 600.8024 1120.6312 S237s TMT10 235 (K) SFsQPGLR (S) S(0.0)FS(0.99)QPGLR s:Phosphorylated S TBC1D1 132688.3 6 2 587.1 264.9 HUMAN 1 4.9695 -13.1486 RPNARVGSEHSLLDP-p Q96RT1-8;S1179-p RPNARVGSEHSLLDP 0.0832139716415161 0.00925852667105384 -0.349333333333333 -0.626666666666667 23.0704486129382 28.7199103300164 -0.349333333333333 -0.626666666666667 0.00493122863238 0.00134279268586386 -4.57110116549675 -6.04286799517343 Q96RT1 ERBB2IP Q96RT1.8.S1179.p_ERBB2IP Q96RT1-8_S1179s _1_1_1179_1179 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5|Q96RT1-4|Q96RT1-6|Q96RT1-7 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16370.16370.4 10.32 10.32 1.47 2 1 1 0 469.2513 1794.0162 S1179s TMT10 1177 (R) VGsEHSLLDPPGK (S) VGS(0.99)EHS(0.0)LLDPPGK K:TMT10,s:Phosphorylated S ERBIN 159762.8 2 25 81.1 633.5 HUMAN 1 -23.0704 -28.7199 RPNKQEESESPVERP-p Q96SB4-3;S480-p RPNKQEESESPVERP 0.182372527376184 0.113287379906483 -0.452 -0.178 14.5352473172896 12.4730054237062 -0.452 -0.178 0.035194537975207 0.0565847573198056 -2.79173235123081 -2.41526322008693 Q96SB4 SRPK1 Q96SB4.3.S480.p_SRPK1 Q96SB4-3_S480sS482s_2_2_480_482 Q96SB4-3 Q96SB4-3|Q96SB4-4 Isoform 1 of SRSF protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7905.7905.5 9.76 8.67 99 2 2 2 0 574.902 2710.5455 S480s S482s TMT10 473 (K) RPNKQEEsEsPVERPLK (E) RPNKQEES(1.0)ES(1.0)PVERPLK K:TMT10,s:Phosphorylated S SRPK1 93208.6 4 5 1661.1 122.72 HUMAN 1 -14.5352 -12.473 RPNKRKGSDSSIPDE-p Q15652;S317-p RPNKRKGSDSSIPDE 0.0291289577020664 0.00211428234964463 -1.091 -0.777 35.8808536698783 41.5849570995554 -1.091 -0.777 0.000258175265917948 6.94231459432191e-05 -8.44111702059946 -10.8677430212214 Q15652 JMJD1C Q15652.S317.p_JMJD1C Q15652_S317s _1_1_317_317 Q15652 Q15652|Q15652-3|A0A1W2PNZ9|Q15652-2 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6820.6820.3 10.21 7.66 1.223 3 1 1 0 739.0574 2135.1911 S317s TMT10 314 (K) RKGsDSSIPDEEK (M) RKGS(0.99)DS(0.0)S(0.0)IPDEEK K:TMT10,s:Phosphorylated S JMJD1C 286573.8 1 3 377.1 336.35 HUMAN 1 -35.8809 -41.585 RPNKTARSPPKLKNS-p P15822;S232-p RPNKTARSPPKLKNS 0.742614310686798 0.0102983178170609 0.0556666666666667 -0.471666666666667 2.45468488400609 27.8990352309111 0.0556666666666667 -0.471666666666667 0.568239620473516 0.00162217041647907 0.607296446663011 -5.80913948488042 P15822 HIVEP1 P15822.S232.p_HIVEP1 P15822_S232s _1_1_232_232 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4037.4037.3 10.64 10.64 3.835 2 1 1 0 432.2477 1214.7621 S232s TMT10 229 (K) TARsPPK (L) T(0.0)ARS(0.99)PPK K:TMT10,s:Phosphorylated S HIVEP1 299483.8 5 5 82.1 631.69 HUMAN 1 2.4547 -27.899 RPPAEKLSPNPPKLT-p P51531;S1377-p RPPAEKLSPNPPKLT 0.775124418170112 0.068566248862505 -0.0403333333333333 0.316666666666667 2.11878318128466 15.4806985714554 -0.0403333333333333 0.316666666666667 0.613933994854055 0.0283093659729873 -0.534949645608632 2.96708947806967 P51531 SMARCA2 P51531.S1377.p_SMARCA2 P51531_S1377s _1_1_1377_1377 P51531 P51531|P51531-2|F6VDE0|A0A0U1RQZ9|B1ALF6|B4DNT1|A0A0U1RR26|B1ALG2|F6T8Q0|B1ALG1 Probable global transcription activator SNF2L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9949.9949.4 11.03 11.72 99 1 1 1 0 564.5784 2175.3217 S1377s TMT10 1369 (R) GRPPAEKLsPNPPK (L) GRPPAEKLS(1.0)PNPPK K:TMT10,s:Phosphorylated S SMARCA2 181903.8 15 23 392.2 331.85 HUMAN 1 -2.1188 15.4807 RPPAEKLSPNPPNLT-p A0A0A0MT49;S1486-p RPPAEKLSPNPPNLT 0.430974594387657 0.0944129586072945 -0.119 0.212666666666667 6.73169983460775 13.556028084562 -0.119 0.212666666666667 0.212241358379574 0.0440957964894409 -1.41396202401281 2.61025353646751 A0A0A0MT49 NotFound A0A0A0MT49.S1486.p_NotFound A0A0A0MT49_S1486s _1_1_1486_1486 A0A0A0MT49 A0A0A0MT49|Q9HBD4|P51532|P51532-4|P51532-3|P51532-2|P51532-5 Transcription activator BRG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12058.12058.3 14.94 14.94 7.502 2 1 1 0 785.4382 2274.3334 S1486s Hydrogen 1478 (R) GRPPAEKLsPNPPNLTK (K) GRPPAEKLS(0.99)PNPPNLT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S SMARCA4 189484.7 25 12 392.1 331.85 HUMAN 1 -6.7317 13.556 RPPEDALSGDSDVDT-p J3KQR7;S952-p RPPEDALSGDSDVDT 0.148266672319898 0.885150204505266 -0.267 -0.02 16.7793774426565 0.744715488918278 -0.267 -0.0199999999999999 0.0209924078638763 0.842419577461856 -3.21930667902495 -0.208537370516785 J3KQR7 NotFound J3KQR7.S952.p_NotFound J3KQR7_S952sS955s_2_2_952_955 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24305.24305.4 30.65 30.65 4.893 10 2 2 0 1074.2305 4133.9618 S952s S955s TMT10 929 (R) LLSNSVDAECEGGSTPRPPEDALsGDsDVDTASTVSLR (S) LLS(0.0)NS(0.0)VDAECEGGS(0.0)T(0.0)PRPPEDALS(0.99)GDS(0.99)DVDT(0.0)AS(0.0)T(0.0)VS(0.0)LR C:Carbamidomethylation,s:Phosphorylated S CEP170B 172326.6 3 38 51.1 746.11 HUMAN 1 -16.7794 -0.7447 RPPGLDYSFDTCKPP-p P22607-2;S580-p RPPGLDYSFDTCKPP 0.577872976852993 0.0387970800964784 -0.0863333333333333 -0.308333333333333 4.38201037047005 18.9474957940899 -0.0863333333333334 -0.308333333333333 0.364585139607402 0.0127423761338968 -0.989482493186848 -3.65343228269854 P22607 FGFR3 P22607.2.S580.p_FGFR3 P22607-2_S580s _1_1_580_580 P22607-2 P22607-2|F8W9L4|P22607-4|P22607-3 Isoform 2 of Fibroblast growth factor receptor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23486.23486.4 11.68 11.68 1.237 4 1 1 0 848.9327 3312.7542 S580s TMT10 573 (R) RPPGLDYsFDTCKPPEEQLTFK (D) RPPGLDY(0.0)S(0.99)FDT(0.0)CKPPEEQLT(0.0)FK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FGFR3 89125.6 2 3 2711.1 73.11 HUMAN 1 -4.382 -18.9475 RPPGMEYSYDINRVP-p P21802-11;S588-p RPPGMEYSYDINRVP 0.215102413706098 0.193037010661573 -0.292666666666667 0.192333333333333 12.8626152276669 9.39303761516003 -0.292666666666667 0.192333333333333 0.0517295234112385 0.114999575830056 -2.48634014601462 1.87571676966395 P21802 FGFR2 P21802.11.S588.p_FGFR2 P21802-11_S588s _1_1_588_588 P21802-11 P21802-11|P21802-3|P21802-16|A0A0A0MR25|P21802-18|P21802-5|P21802-9|P21802-10|P21802-7|P21802-6|P21802-12|P21802-17|P21802-2|P21802-13|P21802-8|D2CGD1|P21802-23|P21802-21|E7EVR7|P21802-15|P21802-20|P21802-4|P21802-22|S4R381 Isoform 11 of Fibroblast growth factor receptor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20464.20464.4 19.09 19.09 7.112 4 1 1 0 807.1436 3145.5851 S588s TMT10 581 (R) RPPGMEYsYDINRVPEEQMTFK (D) RPPGMEY(0.0)S(0.99)Y(0.0)DINRVPEEQMT(0.0)FK K:TMT10,s:Phosphorylated S FGFR2 93644.2 5 3 1625.1 126.26 HUMAN 1 -12.8626 9.393 RPPKKNRSPADAGRG-p Q6ZRS2;S2869-p RPPKKNRSPADAGRG 0.233628206047255 0.119464099601837 0.195 0.231333333333333 12.1061621628736 12.1671374853932 0.195 0.231333333333333 0.0615720741496143 0.0607136372457957 2.35117903524294 2.36081833967274 Q6ZRS2 SRCAP Q6ZRS2.S2869.p_SRCAP Q6ZRS2_S2869s _1_1_2869_2869 Q6ZRS2 Q6ZRS2|Q6ZRS2-2|Q6ZRS2-3|A0A0A0MS59 Helicase SRCAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7820.7820.4 19.21 19.21 14.507 4 1 1 0 642.3322 2486.3363 S2869s TMT10 2867 (K) NRsPADAGRGVDEAPSSTLK (G) NRS(0.99)PADAGRGVDEAPS(0.0)S(0.0)T(0.0)LK K:TMT10,s:Phosphorylated S SRCAP 345203 3 16 219.1 428.72 HUMAN 1 12.1062 12.1671 RPPKMARYDNGSGYR-p Q08211;Y1167-p RPPKMARYDNGSGYR 0.0373775900671563 0.901159228464042 0.612666666666667 0.0276666666666667 32.6040391327535 0.632255519828072 0.612666666666667 0.0276666666666667 0.000549030013885909 0.864518812041828 7.26523486207113 0.178889886187369 Q08211 DHX9 Q08211.Y1167.p_DHX9 Q08211_Y1167y _1_1_1167_1167 Q08211 Q08211|Q08211-2 ATP-dependent RNA helicase A GG20160819_MSz_CCLE_T4D7_pY_Injection_01.5206.5206.2 9.26 6.34 6.342 3 1 1 0 620.7635 1160.5534 Y1167y TMT10 1167 (R) yDNGSGYR (R) Y(0.99)DNGS(0.0)GY(0.0)R y:Phosphorylated Y DHX9 142268.2 1 2 218.1 16.41 HUMAN 1 32.604 0.6323 RPPKNPPSPRPSQLP-p Q6ZRS2;S3016-p RPPKNPPSPRPSQLP 0.62753280718401 0.533701909697181 0.0653333333333333 0.0613333333333334 3.76144877689537 3.66823308955729 0.0653333333333333 0.0613333333333334 0.42058630024625 0.429711217566747 0.871246547310704 0.853020005539265 Q6ZRS2 SRCAP Q6ZRS2.S3016.p_SRCAP Q6ZRS2_S3016s _1_1_3016_3016 Q6ZRS2 Q6ZRS2|Q6ZRS2-2|Q6ZRS2-3|A0A0A0MS59 Helicase SRCAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20650.20650.4 15.31 8.32 4.133 6 1 1 0 836.67 3263.7004 S3016s TMT10 3013 (K) NPPsPRPSQLPVLDRDSTSVLESCGLGR (R) NPPS(0.99)PRPS(0.0)QLPVLDRDS(0.0)T(0.0)S(0.0)VLES(0.0)CGLGR C:Carbamidomethylation,s:Phosphorylated S SRCAP 345203 12 19 219.1 428.72 HUMAN 1 3.7614 3.6682 RPPPAAPSPPAAPGP-p Q4KMQ1;S175-p RPPPAAPSPPAAPGP 0.911605742223265 0.101587514049587 0.0263333333333333 -0.190333333333333 0.785422942312064 13.1221674934639 0.0263333333333334 -0.190333333333333 0.834560269777931 0.0487285233232985 0.21915268572085 -2.53169965089491 Q4KMQ1 TPRN Q4KMQ1.S175.p_TPRN Q4KMQ1_S175s _1_1_175_175 Q4KMQ1 Q4KMQ1 Taperin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13481.13481.5 17.87 17.87 99 1 1 1 0 623.5416 3033.71 S175s TMT10 155 (R) ARPPPPPPPPAPPRPPPAAPsPPAAPGPR (G) ARPPPPPPPPAPPRPPPAAPS(1.0)PPAAPGPR s:Phosphorylated S TPRN 75839.7 3 1 1021.1 187.66 HUMAN 1 0.7854 -13.1222 RPPSRGNSPKEQPFS-p Q9NYF3;S86-p RPPSRGNSPKEQPFS 0.164904495488496 0.10625471425705 -0.223 0.21 15.6728474349692 12.864344501467 -0.223 0.21 0.0270841528762247 0.0517089298494689 -3.00562261440016 2.48530441597265 Q9NYF3 FAM53C Q9NYF3.S86.p_FAM53C Q9NYF3_S86s _1_1_86_86 Q9NYF3 Q9NYF3 Protein FAM53C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18929.18929.4 14.31 10.17 4.056 2 1 1 0 811.6832 3163.7355 S86s TMT10 84 (R) GNsPKEQPFSQVLRPEPPDPEK (L) GNS(0.99)PKEQPFS(0.0)QVLRPEPPDPEK K:TMT10,s:Phosphorylated S FAM53C 43832.4 2 2 976.1 192.85 HUMAN 1 -15.6728 12.8643 RPPSYAGSPVHHAAE-p A0A087X165;S377-p RPPSYAGSPVHHAAE 0.904333446509495 0.20011126579215 -0.026 -0.159 0.858224759840865 9.19355937925554 -0.026 -0.159 0.820686943178588 0.120404872480041 -0.237927485626607 -1.84119625892329 A0A087X165 NotFound A0A087X165.S377.p_NotFound A0A087X165_S377s _1_1_377_377 A0A087X165 A0A087X165|Q9C0H9-5 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8237.8237.4 21.86 21.86 5.394 5 1 1 0 648.0696 2509.2898 S377s TMT10 364 (R) LSYAGGRPPSYAGsPVHHAAER (L) LS(0.0)Y(0.0)AGGRPPS(0.0)Y(0.0)AGS(0.99)PVHHAAER s:Phosphorylated S SRCIN1 130745.5 2 9 98.1 603.22 HUMAN 1 -0.8582 -9.1936 RPPVRVPSWGLEDNV-p Q86VP1-2;S624-p RPPVRVPSWGLEDNV 0.979664479571705 0.452574790517004 -0.004 -0.075 0.176568808872602 4.58884226130552 -0.004 -0.075 0.960158916000287 0.347628819700044 -0.0523094663596405 -1.02794833466646 Q86VP1 TAX1BP1 Q86VP1.2.S624.p_TAX1BP1 Q86VP1-2_S624s _1_1_624_624 Q86VP1-2 Q86VP1-2|Q86VP1-4|Q86VP1-3 Isoform 2 of Tax1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24741.24741.5 21.94 21.44 3.334 3 1 1 0 965.6738 4744.3652 S624s TMT10 601 (R) KMEDGADGAFYPDEIQRPPVRVPsWGLEDNVVCSQPAR (N) KMEDGADGAFY(0.0)PDEIQRPPVRVPS(0.99)WGLEDNVVCS(0.0)QPAR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TAX1BP1 87225.4 4 8 2039.1 101.24 HUMAN 1 -0.1766 -4.5888 RPQLRAASGEDSTEE-p A0A0A0MR88;S1087-p RPQLRAASGEDSTEE 0.887864083220312 0.101246376539955 0.0243333333333333 0.188666666666667 1.00575332487152 13.1416770335444 0.0243333333333333 0.188666666666667 0.79327664350256 0.04851011415808 0.275320966414029 2.53521884418299 A0A0A0MR88 NotFound A0A0A0MR88.S1087.p_NotFound A0A0A0MR88_S1087s _1_1_1087_1087 A0A0A0MR88 Q9Y4E1-3|J3KP36|Q9Y4E1-5|Q5SRD0|A0A0A0MR88|A0A096LPC5|Q9Y4E1-4|Q9Y4E1-2|Q9Y4E1-6 WASH complex subunit 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33998.33998.4 27 27 1.16 5 1 1 0 949.4667 3714.8539 S1087s TMT10 1085 (R) AAsGEDSTEEALAAAAAPWEGGPVPGVDTSPFAK (S) AAS(0.99)GEDS(0.0)T(0.0)EEALAAAAAPWEGGPVPGVDT(0.0)S(0.0)PFAK K:TMT10,s:Phosphorylated S WASHC2C 147223 3 13 12.99 1178.3 HUMAN 1 1.0058 13.1417 RPQQESPSPQQQLPP-p O75376-2;S1922-p RPQQESPSPQQQLPP 0.394618340155404 0.390354782508678 0.135666666666667 -0.0936666666666666 7.45238194039335 5.43196351614043 0.135666666666667 -0.0936666666666666 0.179788457321967 0.286288332104975 1.53999071825457 -1.18240489855204 O75376 NCOR1 O75376.2.S1922.p_NCOR1 O75376-2_S1922s _1_1_1922_1922 O75376-2 O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12603.12603.5 20.65 15.2 1.825 6 1 1 0 876.422 4298.0999 S1922s TMT10 1906 (R) QYEGPLHHYRPQQESPsPQQQLPPSSQAEGMGQVPR (T) QY(0.0)EGPLHHY(0.0)RPQQES(0.0)PS(0.99)PQQQLPPS(0.0)S(0.0)QAEGMGQVPR s:Phosphorylated S NCOR1 259453.1 2 25 35.1 889.74 HUMAN 1 7.4524 -5.432 RPQRFPESYQNELDN-p Q96BY6;S1022-p RPQRFPESYQNELDN 0.651183474642633 0.625776439362819 0.0643333333333333 0.101333333333333 3.49127471887949 2.77098660388853 0.0643333333333333 0.101333333333333 0.447581912948135 0.528325216419889 0.818545251297427 0.673410008182417 Q96BY6 DOCK10 Q96BY6.S1022.p_DOCK10 Q96BY6_S1022s _1_1_1022_1022 Q96BY6 Q96BY6|Q96BY6-3 Dedicator of cytokinesis protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22237.22237.5 8.74 3.02 2.088 4 1 1 0 919.6924 4514.4423 S1022s Hydrogen 1011 (K) IQLPRPQRFPEsYQNELDNLVMVLSDHVIWKYK (D) IQLPRPQRFPES(0.99)Y(0.0)QNELDNLVMVLS(0.0)DHVIWKY(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S DOCK10 251979.7 2 4 2997.1 63.67 HUMAN 1 3.4913 2.771 RPQTKPWSPGSNGHR-p P51826-2;S979-p RPQTKPWSPGSNGHR 0.329289630661066 0.410508191881055 0.170666666666667 0.116333333333333 9.01995944371741 5.14463800141997 0.170666666666667 0.116333333333333 0.125315287736616 0.30586951880804 1.81181807171693 1.13026481957732 P51826 AFF3 P51826.2.S979.p_AFF3 P51826-2_S979s _1_1_979_979 P51826-2 P51826-2 Isoform 2 of AF4/FMR2 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5542.5542.4 9.13 6.03 1.3 4 1 1 0 583.3039 2250.2256 S979s TMT10 971 (K) SRPQTKPWsPGSNGHR (D) S(0.0)RPQT(0.0)KPWS(0.99)PGS(0.0)NGHR K:TMT10,s:Phosphorylated S AFF3 137490.8 1 5 632.2 256.73 HUMAN 1 9.02 5.1446 RPRAPRESAQAIEDL-p P46013;S2793-p RPRAPRESAQAIEDL 0.986720829133154 0.0218392489834702 0.00433333333333333 -0.409 0.118106255205443 22.7017078734233 0.00433333333333335 -0.409 0.973171483526715 0.00536820648853471 0.0352141779281375 -4.47933053693435 P46013 MKI67 P46013.S2793.p_MKI67 P46013_S2793s _1_1_2793_2793 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20096.20096.5 20.68 20.68 8.161 4 1 1 0 811.8 3975.0009 S2793s TMT10 2789 (R) APREsAQAIEDLAGFKDPAAGHTEESMTDDK (T) APRES(0.99)AQAIEDLAGFKDPAAGHT(0.0)EES(0.0)MT(0.0)DDK K:TMT10,s:Phosphorylated S MKI67 360912.4 1 92 5.1 1918.46 HUMAN 1 0.1181 -22.7017 RPRDQSLSPSKGENK-p Q5TCQ9;S1282-p RPRDQSLSPSKGENK 0.279768059006979 0.213033694991763 0.162333333333333 0.136 10.4538442787913 8.83554268368443 0.162333333333333 0.136 0.0900773439860519 0.130751214521558 2.06068099420226 1.77926767091131 Q5TCQ9 MAGI3 Q5TCQ9.S1282.p_MAGI3 Q5TCQ9_S1282s _1_1_1282_1282 Q5TCQ9 Q5TCQ9|Q5TCQ9-4 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8405.8405.2 8.1 3.52 2.507 3 1 1 0 700.3666 1319.7571 S1282s TMT10 1278 (R) DQSLsPSK (G) DQS(0.0)LS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S MAGI3 166517.7 3 7 1019.1 188.04 HUMAN 1 10.4538 8.8355 RPREAPDTYLAQGPD-p Q15653;T160-p RPREAPDTYLAQGPD 0.789534097325871 0.870622174199802 -0.103333333333333 0.0206666666666667 1.97996750666488 0.847844670088574 -0.103333333333333 0.0206666666666667 0.633874453803485 0.822650816313892 -0.504361116980429 0.235241244874905 Q15653 NFKBIB Q15653.T160.p_NFKBIB Q15653_T160tY161y_2_2_160_161 Q15653 Q15653 NF-kappa-B inhibitor beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12362.12362.4 8.77 2.96 2.493 7 2 2 0 1202.8403 4647.3956 T160t Y161y N173n TMT10 151 (R) PRRPREAPDtyLAQGPDRTPDTnHTPVALYPDSDLEK (E) PRRPREAPDT(0.99)Y(0.99)LAQGPDRT(0.0)PDT(0.0)N(1.0)HT(0.0)PVALY(0.0)PDS(0.0)DLEK K:TMT10,t:Phosphorylated T,y:Phosphorylated Y,n:Deamidated NFKBIB 38169.8 1 1 6901.1 8.77 HUMAN 1 -1.98 0.8478 RPRERHPSWRSEETQ-p P23588;S406-p RPRERHPSWRSEETQ 0.8286411774081 0.0572012482294128 -0.0423333333333333 -0.226 1.56792628568093 16.5582901674543 -0.0423333333333333 -0.226 0.696959225988263 0.0220887420334064 -0.410837819270585 -3.17379521356689 P23588 EIF4B P23588.S406.p_EIF4B P23588_S406s _1_1_406_406 P23588 E7EX17|P23588|P23588-2 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3703.3703.3 16.5 12.67 1.628 3 1 1 0 541.2305 1541.7091 S406s Hydrogen 404 (R) HPsWRSEETQER (E) HPS(0.99)WRS(0.0)EET(0.0)QER s:Phosphorylated S EIF4B 69207 19 12 146.1 516.36 HUMAN 1 -1.5679 -16.5583 RPRGLSRSLPPPPPA-p Q99640;S50-p RPRGLSRSLPPPPPA 0.978680387045124 0.00702391618163091 0.00433333333333333 -0.482 0.18527103092124 30.8498664487983 0.00433333333333334 -0.482 0.958236913580716 0.000822267935366755 0.0548358938100256 -6.68393135548975 Q99640 PKMYT1 Q99640.S50.p_PKMYT1 Q99640_S50s _1_1_50_50 Q99640 B4DZM6|Q99640|Q99640-3|Q99640-2|A6NHV6 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14085.14505.3 12.88 12.88 99 1 1 1 0 481.2788 1361.8557 S50s TMT10 50 (R) sLPPPPPAK (G) S(1.0)LPPPPPAK K:TMT10,s:Phosphorylated S PKMYT1 55090.9 6 3 926.1 199.78 HUMAN 1 0.1853 -30.8499 RPRGRECSPTSSLER-p Q9P1Y6;S1124-p RPRGRECSPTSSLER 0.827387741869713 0.0876311942740425 0.0483333333333333 0.260666666666667 1.58331873502501 13.9961577075934 0.0483333333333333 0.260666666666667 0.694493405833715 0.0398459539988426 0.414411409919246 2.69059956877406 Q9P1Y6 PHRF1 Q9P1Y6.S1124.p_PHRF1 Q9P1Y6_S1124s _1_1_1124_1124 Q9P1Y6 Q9P1Y6|Q9P1Y6-3|A0A0J9YWD5|A0A0J9YYB5|F8WEF5 PHD and RING finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5377.5377.3 8.97 4.35 1.119 4 1 1 0 563.2603 1607.8009 S1124s TMT10 1120 (R) GRECsPTSSLER (L) GRECS(0.99)PT(0.0)S(0.0)S(0.0)LER C:Carbamidomethylation,s:Phosphorylated S PHRF1 180374.6 3 14 438.1 312.23 HUMAN 1 1.5833 13.9962 RPRKDGASPFQRARK-p Q8NEZ4-3;S46-p RPRKDGASPFQRARK 0.167787448802573 0.0499530681835299 0.291 -0.471333333333333 15.4860346418971 17.4000368643806 0.291 -0.471333333333333 0.028274604304826 0.0181968541244082 2.97011417368305 -3.33922591193559 Q8NEZ4 KMT2C Q8NEZ4.3.S46.p_KMT2C Q8NEZ4-3_S46s _1_1_46_46 Q8NEZ4-3 Q8NEZ4-3|H0YMU7 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7542.7542.3 7.8 7.8 99 1 1 1 0 515.2748 1463.8371 S46s TMT10 42 (R) KDGAsPFQR (A) KDGAS(1.0)PFQR K:TMT10,s:Phosphorylated S KMT2C 554869.1 2 2 88.1 626.31 HUMAN 1 15.486 -17.4 RPRKEAASQGLLKQV-p Q96I34;S60-p RPRKEAASQGLLKQV 0.374297731091176 0.178788388097215 0.162666666666667 -0.145666666666667 7.90158935021489 9.83371740887892 0.162666666666667 -0.145666666666667 0.162121668603639 0.103903041138999 1.6180842388314 -1.95206080445441 Q96I34 PPP1R16A Q96I34.S60.p_PPP1R16A Q96I34_S60s _1_1_60_60 Q96I34 Q96I34 Protein phosphatase 1 regulatory subunit 16A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14529.14529.2 14.57 9.06 99 1 1 1 0 727.9057 1374.8357 S60s TMT10 57 (K) EAAsQGLLK (Q) EAAS(1.0)QGLLK K:TMT10,s:Phosphorylated S PPP1R16A 58438 3 1 3132.1 59.87 HUMAN 1 7.9016 -9.8337 RPRLGRGSPPTRRGM-p Q8NDL9;S794-p RPRLGRGSPPTRRGM 0.108274227113564 0.163521969534818 0.306666666666667 -0.146666666666667 20.2683331458185 10.3390817561209 0.306666666666667 -0.146666666666667 0.00940084052509992 0.0924893706749223 3.93677566283972 -2.03983044802868 Q8NDL9 AGBL5 Q8NDL9.S794.p_AGBL5 Q8NDL9_S794s _1_1_794_794 Q8NDL9 Q8NDL9 Cytosolic carboxypeptidase-like protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4777.4777.3 10.65 10.65 2.592 2 1 1 0 417.2254 1169.6952 S794s TMT10 790 (R) LGRGsPPTR (R) LGRGS(0.99)PPT(0.0)R s:Phosphorylated S AGBL5 98730.3 1 3 3996.1 39.47 HUMAN 1 20.2683 -10.3391 RPRSLPLSPELESSP-p Q6DT37;S1544-p RPRSLPLSPELESSP 0.992991258523428 0.754216034974715 0.00199999999999999 0.0383333333333334 0.0631968930881746 1.69269002505594 0.00200000000000003 0.0383333333333334 0.985553740774833 0.677221905639621 0.0189583612742683 0.439568491236569 Q6DT37 CDC42BPG Q6DT37.S1544.p_CDC42BPG Q6DT37_S1544s _1_1_1544_1544 Q6DT37 Q6DT37 Serine/threonine-protein kinase MRCK gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26408.26408.2 11.61 11.61 1.14 4 1 1 0 782.8889 1484.8046 S1544s TMT10 1540 (R) SLPLsPELESSP (-) S(0.0)LPLS(0.99)PELES(0.0)S(0.0)P s:Phosphorylated S CDC42BPG 173882.5 1 11 997.1 190.4 HUMAN 1 0.0632 1.6927 RPRSRSLSPGRATGT-p O60307;S157-p RPRSRSLSPGRATGT 0.531734774301321 0.0737462611660232 -0.115333333333333 0.299666666666667 5.0760403137036 15.0311708093254 -0.115333333333333 0.299666666666667 0.310739146566567 0.0313966216198772 -1.11797481417675 2.88241363903113 O60307 MAST3 O60307.S157.p_MAST3 O60307_S155sS157s_2_2_155_157 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24136.24136.3 8.9 8.9 7.501 5 2 2 0 919.0669 2595.2443 S155s S157s Hydrogen 155 (R) sLsPGRATGTFDNEIVMMNHVYR (E) S(0.99)LS(0.99)PGRAT(0.0)GT(0.0)FDNEIVMMNHVY(0.0)R s:Phosphorylated S MAST3 143933.5 2 34 121.3 549.41 HUMAN 1 -5.076 15.0312 RPRSRSLSPGRSPVS-p Q6P0Q8;S301-p RPRSRSLSPGRSPVS 0.345614283878969 0.752400094712724 -0.136333333333333 -0.0476666666666666 8.57410404106684 1.70662664293586 -0.136333333333333 -0.0476666666666666 0.13886397597739 0.675052166944911 -1.73463734601372 -0.44275680986101 Q6P0Q8 MAST2 Q6P0Q8.S301.p_MAST2 Q6P0Q8_S299sS301s_2_2_299_301 Q6P0Q8 Q6P0Q8|Q6P0Q8-2|E7ERL6 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27480.27557.4 20.7 20.7 1.128 6 2 2 0 746.5998 2823.4371 S299s S301s Hydrogen 299 (R) sLsPGRSPVSFDSEIIMMNHVYK (E) S(0.99)LS(0.99)PGRS(0.0)PVS(0.0)FDS(0.0)EIIMMNHVY(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S MAST2 197687.5 4 70 121.1 549.41 HUMAN 1 -8.5741 -1.7066 RPRTECCSDAGDSPL-p Q96M89;S149-p RPRTECCSDAGDSPL 0.749520863039578 0.0322345694854982 0.0466666666666667 -0.423333333333333 2.38247972660045 20.1291526493893 0.0466666666666666 -0.423333333333333 0.577766061410127 0.00970699341616649 0.591932433259798 -3.90304052034514 Q96M89 CCDC138 Q96M89.S149.p_CCDC138 Q96M89_S149s _1_1_149_149 Q96M89 Q96M89|Q96M89-2 Coiled-coil domain-containing protein 138 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14233.14233.4 12.42 12.42 3.177 4 1 1 0 719.5971 2795.3981 S149s TMT10 145 (R) TECCsDAGDSPLKPVSCPK (S) T(0.0)ECCS(0.99)DAGDS(0.0)PLKPVS(0.0)CPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCDC138 76958.9 2 2 2970.1 64.38 HUMAN 1 2.3825 -20.1292 RPRVAVRSAYGGPVG-p P08729;S53-p RPRVAVRSAYGGPVG 0.67010206648574 0.028602122908627 0.109666666666667 0.369 3.25633015329167 20.9042571378568 0.109666666666667 0.369 0.472462109459653 0.00812034135763674 0.772011870843575 4.07172559710982 P08729 KRT7 P08729.S53.p_KRT7 P08729_S53s _1_1_53_53 P08729 P08729 Keratin, type II cytoskeletal 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13363.13363.3 14.57 14.57 9.891 2 1 1 0 613.6652 1759.0176 S53s TMT10 49 (R) VAVRsAYGGPVGAGIR (E) VAVRS(0.99)AY(0.0)GGPVGAGIR s:Phosphorylated S KRT7 51441.8 1 43 69.2 672.47 HUMAN 1 3.2563 20.9043 RPSEYTKSVIDLRPE-p Q96C24;S274-p RPSEYTKSVIDLRPE 0.172417958704635 0.0115841932008813 0.229 0.445333333333333 15.1992532041196 27.0863656501737 0.229 0.445333333333333 0.0302047106419155 0.00195597560965736 2.91590549270268 5.58460725829554 Q96C24 SYTL4 Q96C24.S274.p_SYTL4 Q96C24_S274s _1_1_274_274 Q96C24 Q96C24|Q96C24-2 Synaptotagmin-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20284.20284.3 14.53 7.11 13.541 3 1 1 0 830.4164 2409.2571 S274s TMT10 274 (K) sVIDLRPEDVVHESGSLGDR (S) S(0.99)VIDLRPEDVVHES(0.0)GS(0.0)LGDR s:Phosphorylated S SYTL4 76649.8 1 4 1078.1 180.34 HUMAN 1 15.1993 27.0864 RPSFGLGTPKAKGDG-p O14686-3;T1806-p RPSFGLGTPKAKGDG 0.515885052439712 0.00415615768684408 -0.0866666666666667 -0.592666666666667 5.30629700270417 35.0423583802238 -0.0866666666666667 -0.592666666666667 0.294693325561433 0.000313158469577898 -1.15990412451938 -8.10982024116006 O14686 KMT2D O14686.3.T1806.p_KMT2D O14686-3_T1806t _1_1_1806_1806 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27602.27602.4 16.51 16.51 7.699 2 1 1 0 578.8287 2232.3269 T1806t TMT10 1791 (K) ALFAVGVGRPSFGLGtPK (A) ALFAVGVGRPS(0.0)FGLGT(0.99)PK K:TMT10,t:Phosphorylated T KMT2D 600227.3 4 15 17.1 1042.08 HUMAN 1 -5.3063 -35.0424 RPSLFVLSPIKEPAK-p Q8N3V7-2;S575-p RPSLFVLSPIKEPAK 0.116602871314905 0.231463566837642 -0.448 -0.169666666666667 19.4328924063199 8.37161079175027 -0.448 -0.169666666666667 0.0113949063269848 0.145491935307993 -3.75828612938443 -1.69900666299553 Q8N3V7 SYNPO Q8N3V7.2.S575.p_SYNPO Q8N3V7-2_S575s _1_1_575_575 Q8N3V7-2 Q8N3V7|Q8N3V7-2|Q8N3V7-3 Isoform 2 of Synaptopodin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10560.10560.4 9.72 2.1 9.716 3 1 1 0 573.8292 2212.3055 S575s Hydrogen 562 (K) QPPYQLRPSLFVLsPIK (E) QPPY(0.0)QLRPS(0.0)LFVLS(0.99)PIK K:TMT10-Lys-Only,s:Phosphorylated S SYNPO 96794.1 1 9 947.1 196.99 HUMAN 1 -19.4329 -8.3716 RPSQNAISFFNVGHS-p Q9BXB4;S194-p RPSQNAISFFNVGHS 0.476079193431219 0.0230030135791894 0.101333333333333 -0.351333333333333 5.93540481556482 22.3640667760206 0.101333333333333 -0.351333333333333 0.254952642968301 0.00580220838584489 1.27304793221217 -4.4009288678243 Q9BXB4 OSBPL11 Q9BXB4.S194.p_OSBPL11 Q9BXB4_S194s_1_1_194_194 Q9BXB4 Q9BXB4 Oxysterol-binding protein-related protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19269.19269.4 12.03 12.03 1.2 3 1 1 0 582.8056 2247.2399 N191n S194s TMT10 187 (R) RPSQnAIsFFNVGHSK (L) RPS(0.0)QN(0.99)AIS(0.99)FFN(0.0)VGHS(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S OSBPL11 84383.5 1 7 1360.1 150.18 HUMAN 1 5.9354 -22.3641 RPSQRSSSPVGLAKW-p Q9NRA8;S951-p RPSQRSSSPVGLAKW 0.830631691171762 0.509251692313356 -0.035 -0.0933333333333333 1.55180005168853 3.92906298291962 -0.035 -0.0933333333333333 0.699551987543509 0.404663190854019 -0.407086748206436 -0.903394404901566 Q9NRA8 EIF4ENIF1 Q9NRA8.S951.p_EIF4ENIF1 Q9NRA8_S951s _1_1_951_951 Q9NRA8 Q9NRA8-3|B1AKL4|Q9NRA8-2 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12230.12444.2 12.31 8.91 1.37 3 1 1 0 692.3861 1303.7986 S951s TMT10 949 (R) SSsPVGLAK (W) S(0.0)S(0.0)S(0.99)PVGLAK K:TMT10,s:Phosphorylated S EIF4ENIF1 108541.3 4 22 150.1 511.59 HUMAN 1 -1.5518 -3.9291 RPSRFFMTPPRLHYT-p Q5TKA1-2;T313-p RPSRFFMTPPRLHYT 0.96003211231951 0.343327766238157 -0.00800000000000001 0.112666666666667 0.342346513965935 6.15063507523521 -0.00800000000000001 0.112666666666667 0.92419869001797 0.242625527424785 -0.0996648445915181 1.31103463720337 Q5TKA1 LIN9 Q5TKA1.2.T313.p_LIN9 Q5TKA1-2_T313tS325s_2_2_313_325 Q5TKA1-2 Q5TKA1-2|Q5TKA1-3 Isoform 2 of Protein lin-9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.36363.36363.5 18.99 15.98 1.574 5 2 2 0 805.4005 3863.0304 T313t S325s TMT10 310 (R) FFMtPPRLHYTPPLQsPIIDNDPLLGQSPWR (S) FFMT(0.99)PPRLHY(0.0)T(0.0)PPLQS(0.99)PIIDNDPLLGQS(0.0)PWR t:Phosphorylated T,s:Phosphorylated S LIN9 64323.3 4 9 1238.1 163 HUMAN 1 -0.3423 6.1506 RPTFLQLSPGGLRRA-p Q5JR12;S76-p RPTFLQLSPGGLRRA 0.180801698912031 0.134683018480393 0.234 0.196666666666667 14.6512011146218 11.4755736401718 0.234 0.196666666666667 0.0342673001443034 0.0711938756979836 2.81328603607225 2.23858603993862 Q5JR12 PPM1J Q5JR12.S76.p_PPM1J Q5JR12_S76s _1_1_76_76 Q5JR12 Q5JR12|S4R3C3 Protein phosphatase 1J HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24497.24497.4 13.03 13.13 12.7 4 1 1 0 536.5386 2063.1599 S76s TMT10 65 (R) ASFSRPTFLQLsPGGLR (R) AS(0.0)FS(0.0)RPT(0.0)FLQLS(0.99)PGGLR s:Phosphorylated S PPM1J 55517.9 8 3 2032.1 101.56 HUMAN 1 14.6512 11.4756 RPTRAEGSDVANAVL-p P14618;S346-p RPTRAEGSDVANAVL 0.905401095573681 0.0481854795612809 -0.0183333333333333 -0.317 0.850145466734171 17.6110475358964 -0.0183333333333334 -0.317 0.822215109429095 0.0173338584763291 -0.235854727686711 -3.38127904666885 P14618 PKM P14618.S346.p_PKM P14618_S346s _1_1_346_346 P14618 P14618|P14618-2|P14618-3|B4DNK4|H3BR70 Pyruvate kinase PKM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34455.34455.5 29.35 29.02 28.257 4 1 1 0 807.3963 3952.9673 S346s TMT10 343 (R) AEGsDVANAVLDGADCIMLSGETAKGDYPLEAVR (M) AEGS(0.99)DVANAVLDGADCIMLS(0.0)GET(0.0)AKGDY(0.0)PLEAVR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PKM 58506.4 5 14 502.1 291.2 HUMAN 1 -0.8501 -17.611 RPTSRAPSPSGLMSP-p Q9P1Y5;S1074-p RPTSRAPSPSGLMSP 0.657342184724599 0.72026850542444 -0.0643333333333333 -0.037 3.41845089485103 1.96393573337634 -0.0643333333333333 -0.037 0.455150380901187 0.636218695228005 -0.804195087160046 -0.500742699777001 Q9P1Y5 CAMSAP3 Q9P1Y5.S1074.p_CAMSAP3 Q9P1Y5_S1074s _1_1_1074_1074 Q9P1Y5 Q9P1Y5-2 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14618.14618.3 8.09 8.09 1.111 4 1 1 0 499.2444 1415.7514 S1074s TMT10 1072 (R) APsPSGLMSPSR (L) APS(0.99)PS(0.0)GLMS(0.0)PS(0.0)R s:Phosphorylated S CAMSAP3 135546 7 23 217.1 432.4 HUMAN 1 -3.4185 -1.9639 RPVLGRESVQVPDDQ-p Q9Y365;S21-p RPVLGRESVQVPDDQ 0.0370606253912864 0.216252885857927 -0.716333333333333 -0.188333333333333 32.715476968484 8.75095604042157 -0.716333333333333 -0.188333333333333 0.000535121380275315 0.133322790780841 -7.30279020850822 -1.76463742643091 Q9Y365 STARD10 Q9Y365.S21.p_STARD10 Q9Y365_S21s _1_1_21_21 Q9Y365 Q9Y365 START domain-containing protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17557.17557.4 18.34 14.25 2.343 3 1 1 0 844.1745 3293.7076 S21s TMT10 4 (K) LAASTEPQGPRPVLGREsVQVPDDQDFR (S) LAAS(0.0)T(0.0)EPQGPRPVLGRES(0.99)VQVPDDQDFR s:Phosphorylated S STARD10 33447.5 1 2 2136.1 96.25 HUMAN 1 -32.7155 -8.751 RPVLPDPSPPGPSTV-p Q18PE1-3;S220-p RPVLPDPSPPGPSTV 0.892926925432374 0.0114504617192839 0.0413333333333333 -0.420666666666667 0.963050968143682 27.1648757939739 0.0413333333333334 -0.420666666666667 0.80111507320437 0.00192093389870472 0.264584297897336 -5.60600876935881 Q18PE1 DOK7 Q18PE1.3.S220.p_DOK7 Q18PE1-3_S220s _1_1_220_220 Q18PE1-3 Q18PE1-3|Q18PE1-2 Isoform 3 of Protein Dok-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24687.24687.4 11.7 4.48 3.827 5 1 1 0 881.4769 3442.9099 S220s TMT10 202 (R) GISPTKGPFGLRPVLPDPsPPGPSTVEER (V) GIS(0.0)PT(0.0)KGPFGLRPVLPDPS(0.99)PPGPS(0.0)T(0.0)VEER K:TMT10,s:Phosphorylated S DOK7 64678.5 1 1 4340.1 33.21 HUMAN 1 0.9631 -27.1649 RPVSSAASVYAGAGG-p P05783;S34-p RPVSSAASVYAGAGG 0.0654149293186431 0.632379182346825 0.447666666666667 0.073 25.5947989132964 2.70570314561263 0.447666666666667 0.073 0.00275752912829635 0.536327030242873 5.19601567764774 0.65988851040245 P05783 KRT18 P05783.S34.p_KRT18 P05783_S34s _1_1_34_34 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16736.16748.4 26.49 26.49 2.748 10 1 1 0 791.64 3083.5708 S34s TMT10 15 (R) SLGSVQAPSYGARPVSSAAsVYAGAGGSGSR (I) S(0.0)LGS(0.0)VQAPS(0.0)Y(0.0)GARPVS(0.0)S(0.0)AAS(0.99)VY(0.0)AGAGGS(0.0)GS(0.0)R s:Phosphorylated S KRT18 48057 17 8 89.1 623.62 HUMAN 1 25.5948 2.7057 RPVVGAVSVPELTNA-p Q16825;S538-p RPVVGAVSVPELTNA 0.234975861639753 0.414271121961552 0.176333333333333 0.094 12.0549089739171 5.09096344837247 0.176333333333333 0.094 0.0623030205712594 0.309673223716068 2.34207768498915 1.12047183071717 Q16825 PTPN21 Q16825.S538.p_PTPN21 Q16825_S538s _1_1_538_538 Q16825 Q16825 Tyrosine-protein phosphatase non-receptor type 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25591.25591.4 24.42 24.42 3.228 4 1 1 0 865.6954 3379.7994 S538s TMT10 531 (R) RPVVGAVsVPELTNAQLQAQDYPSPNIMR (T) RPVVGAVS(0.99)VPELT(0.0)NAQLQAQDY(0.0)PS(0.0)PNIMR s:Phosphorylated S PTPN21 134191.5 10 2 762.1 229.75 HUMAN 1 12.0549 5.091 RPVYPTKTFPNHYSI-p P22413;T256-p RPVYPTKTFPNHYSI 0.37550402812562 0.0140375296445244 -0.255 0.377 7.8651908985403 25.6983830287546 -0.255 0.377 0.163486128756589 0.00269253710648022 -1.61176582558005 5.21610960655727 P22413 ENPP1 P22413.T256.p_ENPP1 P22413_T256t _1_1_256_256 P22413 P22413|E9PE72 Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24231.24231.4 7.05 7.05 7.054 6 1 1 0 785.9015 3060.6195 T256t TMT10 256 (K) tFPNHYSIVTGLYPESHGIIDNK (M) T(0.99)FPNHY(0.0)S(0.0)IVT(0.0)GLY(0.0)PES(0.0)HGIIDNK K:TMT10,t:Phosphorylated T ENPP1 107090.6 1 1 7275.1 7.05 HUMAN 1 -7.8652 25.6984 RPWVRQPSAPEKHSR-p A7KAX9;S1957-p RPWVRQPSAPEKHSR 0.833043573341717 0.530785724898093 -0.0326666666666667 -0.137 1.52998932528934 3.69892502387999 -0.0326666666666667 -0.137 0.70307404799762 0.426685119856193 -0.402001730599179 -0.85898519069217 A7KAX9 ARHGAP32 A7KAX9.S1957.p_ARHGAP32 A7KAX9_S1957s _1_1_1957_1957 A7KAX9 A7KAX9 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12162.12162.4 13.13 13.13 99 1 1 1 0 595.3095 2298.2429 S1957s TMT10 1947 (K) EMERPWVRQPsAPEK (H) EMERPWVRQPS(1.0)APEK K:TMT10,s:Phosphorylated S ARHGAP32 232236.5 1 28 159.1 497.4 HUMAN 1 -1.53 -3.6989 RPYDGAASAYAQNYR-p J3KNL6;S1207-p RPYDGAASAYAQNYR 0.726532216049973 0.449449752681948 -0.0713333333333333 0.0826666666666667 2.6310595637918 4.62953585408698 -0.0713333333333334 0.0826666666666667 0.545624726833801 0.344386734628159 -0.644425705399124 1.03551267478219 J3KNL6 SEC16A J3KNL6.S1207.p_SEC16A J3KNL6_S1207s _1_1_1207_1207 J3KNL6 J3KNL6|F1T0I1|O15027-5 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11785.11785.3 15.13 15.13 5.699 5 1 1 0 725.6675 2095.0195 S1207s TMT10 1199 (R) YRPYDGAAsAYAQNYR (Y) Y(0.0)RPY(0.0)DGAAS(0.99)AY(0.0)AQNY(0.0)R s:Phosphorylated S SEC16A 253486.5 2 23 15.1 1143.82 HUMAN 1 -2.6311 4.6295 RPYVAWGSPEPESYE-p Q86V87;S486-p RPYVAWGSPEPESYE 0.933071381648512 0.364297438884349 -0.014 0.119666666666667 0.590787390961733 5.81308793961679 -0.014 0.119666666666667 0.872813109997443 0.262235332322718 -0.167827567795392 1.25090530274366 Q86V87 FAM160B2 Q86V87.S486.p_FAM160B2 Q86V87_S486s _1_1_486_486 Q86V87 Q86V87 Protein FAM160B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32939.32939.5 33.38 31.15 2.69 10 1 1 0 1161.546 5723.7382 S486s TMT10 475 (R) NLEGRPYVAWGsPEPESYEDTLDLEEDPYFTDSFLDSGFQTPAKPR (L) NLEGRPY(0.0)VAWGS(0.99)PEPES(0.0)Y(0.0)EDT(0.0)LDLEEDPY(0.0)FT(0.0)DS(0.0)FLDS(0.0)GFQT(0.0)PAKPR K:TMT10,s:Phosphorylated S FAM160B2 83251.4 1 1 3939.1 40.45 HUMAN 1 -0.5908 5.8131 RQACTAQTPEPLRRH-p Q86VI3;T1415-p RQACTAQTPEPLRRH 0.369204116317882 0.219827083788016 0.147 -0.197333333333333 8.02674646282451 8.66168329108686 0.147 -0.197333333333333 0.15751624627965 0.136091709951747 1.63980010463774 -1.74919581200798 Q86VI3 IQGAP3 Q86VI3.T1415.p_IQGAP3 Q86VI3_T1415t _1_1_1415_1415 Q86VI3 Q86VI3|F2Z2E2 Ras GTPase-activating-like protein IQGAP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6444.6444.3 13.19 13.19 3.246 2 1 1 0 612.9714 1756.9326 T1415t TMT10 1409 (R) QACTAQtPEPLRR (H) QACT(0.0)AQT(0.99)PEPLRR C:Carbamidomethylation,t:Phosphorylated T IQGAP3 185380.1 3 4 1872.1 109.83 HUMAN 1 8.0267 -8.6617 RQALKSASTDLGTAD-p B5MCU0;S869-p RQALKSASTDLGTAD 0.820251131741865 0.132411490459811 0.037 0.184 1.65813081383589 11.5733790628789 0.037 0.184 0.682632433207278 0.0696084709096645 0.431687254138533 2.25580555359319 B5MCU0 NotFound B5MCU0.S869.p_NotFound B5MCU0_S869s _1_1_869_869 B5MCU0 B5MCG9|B5MCU0|Q9Y2K5|A0A0U1RRA6|Q9Y2K5-2|Q9Y2K5-3 R3H domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20315.20315.2 15.64 15.64 1.104 4 1 1 0 885.9437 1690.9173 S869s TMT10 867 (K) SAsTDLGTADVVLGR (V) S(0.0)AS(0.99)T(0.0)DLGT(0.0)ADVVLGR s:Phosphorylated S R3HDM2 109377.4 2 9 761.1 230.16 HUMAN 1 1.6581 11.5734 RQAQAQESEEEEESR-p Q9NVM6;S112-p RQAQAQESEEEEESR 0.975009344981545 0.0281961996774925 0.00533333333333333 0.281666666666667 0.2136921409548 21.001489434751 0.00533333333333333 0.281666666666667 0.951986491563816 0.00794055862572691 0.0630548939026976 4.09317648819583 Q9NVM6 DNAJC17 Q9NVM6.S112.p_DNAJC17 Q9NVM6_S112s _1_1_112_112 Q9NVM6 Q9NVM6|H0YLQ7 DnaJ homolog subfamily C member 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3424.3424.2 19.09 19.09 6.448 2 1 1 0 979.9129 1878.8515 S112s TMT10 106 (R) QAQAQEsEEEEESR (S) QAQAQES(0.99)EEEEES(0.0)R s:Phosphorylated S DNAJC17 34800.8 3 1 3601.1 47.41 HUMAN 1 0.2137 21.0015 RQAQKVATPLPDPMA-p Q14126;T922-p RQAQKVATPLPDPMA 0.212213168338447 0.440973595762745 0.201 0.0736666666666667 12.9966925019249 4.7356361607426 0.201 0.0736666666666667 0.0501569072970365 0.336075136676647 2.51047094630344 1.05517772789646 Q14126 DSG2 Q14126.T922.p_DSG2 Q14126_T922t _1_1_922_922 Q14126 Q14126 Desmoglein-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18477.18477.2 13.38 8.49 2.062 2 1 1 0 782.3938 1483.814 T922t TMT10 920 (K) VAtPLPDPMASR (N) VAT(0.99)PLPDPMAS(0.0)R t:Phosphorylated T DSG2 123090.5 9 9 494.1 293.66 HUMAN 1 12.9967 4.7356 RQASLPGSPQALRNP-p O15018;S948-p RQASLPGSPQALRNP 0.404860087625753 0.0491784469380527 0.216666666666667 -0.401 7.25043147003956 17.4989113795097 0.216666666666667 -0.401 0.188346195891142 0.0177872521677397 1.50478263229086 -3.35890110262164 O15018 PDZD2 O15018.S948.p_PDZD2 O15018_S948s _1_1_948_948 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20463.20463.3 12.69 12.69 3.184 2 1 1 0 709.7263 2047.1974 S948s TMT10 942 (R) QASLPGsPQALRNPLLR (Q) QAS(0.0)LPGS(0.99)PQALRNPLLR s:Phosphorylated S PDZD2 304146 1 10 85.1 628.64 HUMAN 1 7.2504 -17.4989 RQASLRRSLIYTDTL-p Q5SYE7-2;S190-p RQASLRRSLIYTDTL 0.176527526104725 0.0470205414235501 0.35 -0.247333333333333 14.9379428844768 17.7622805798601 0.35 -0.247333333333333 0.0320778839255714 0.0167406355603009 2.86682039151407 -3.41156769576317 Q5SYE7 NHSL1 Q5SYE7.2.S190.p_NHSL1 Q5SYE7-2_S190s _1_1_190_190 Q5SYE7-2 Q5SYE7-2 Isoform 2 of NHS-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22101.22101.2 11.24 11.24 3.612 4 1 1 0 745.397 1409.8201 S190s TMT10 190 (R) sLIYTDTLVR (R) S(0.99)LIY(0.0)T(0.0)DT(0.0)LVR s:Phosphorylated S NHSL1 171957.1 3 2 747.1 232.6 HUMAN 1 14.9379 -17.7623 RQASVHDSGEEGEA_-p Q8TE77;S653-p RQASVHDSGEEGEA_ 0.399783218903748 0.174887432749875 0.116666666666667 0.145333333333333 7.34896204413876 9.9585188676281 0.116666666666667 0.145333333333333 0.184121199518421 0.100959714374387 1.52196944836938 1.97371022731912 Q8TE77 SSH3 Q8TE77.S653.p_SSH3 Q8TE77_S653s_1_1_653_653 Q8TE77 Q8TE77|Q8TE77-3|Q8TE77-4|C9JUG3 Protein phosphatase Slingshot homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5474.5474.2 13.23 13.23 8.178 2 1 1 0 804.325 1544.7026 Q647q S653s TMT10 647 (R) qASVHDsGEEGEA (-) Q(1.0)AS(0.0)VHDS(0.99)GEEGEA q:Pyroglutamic acid,s:Phosphorylated S SSH3 73336.6 5 10 930.1 199.29 HUMAN 1 7.349 9.9585 RQDKKDKSRAPISAK-p P60891;S103-p RQDKKDKSRAPISAK 0.137378774237888 0.109254310366661 -0.583666666666667 0.210333333333333 17.6560428283403 12.7034500259189 -0.583666666666667 0.210333333333333 0.0171551972989306 0.0536605348886094 -3.39298647894946 2.45645383467547 P60891 PRPS1 P60891.S103.p_PRPS1 P60891_S103s _1_1_103_103 P60891 P60891|P11908 Ribose-phosphate pyrophosphokinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7352.7352.3 8.23 8.23 8.225 2 1 1 0 456.5986 1287.8149 S103s TMT10 103 (K) sRAPISAK (L) S(0.99)RAPIS(0.0)AK K:TMT10,s:Phosphorylated S PRPS1 35347.1 1 2 2695.1 73.72 HUMAN 1 -17.656 12.7035 RQDPQVVSPFSRGKQ-p Q12986;S326-p RQDPQVVSPFSRGKQ 0.636854133601066 0.0891732094339126 0.0763333333333333 -0.212333333333333 3.65494257859604 13.8922707474107 0.0763333333333333 -0.212333333333333 0.431028256922452 0.0408105948705621 0.850568807986128 -2.67157276817908 Q12986 NFX1 Q12986.S326.p_NFX1 Q12986_S326s _1_1_326_326 Q12986 Q12986|Q12986-2|Q12986-3 Transcriptional repressor NF-X1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9871.9871.3 10.28 5.34 2.126 2 1 1 0 575.6277 1644.9019 S326s TMT10 319 (R) RQDPQVVsPFSR (G) RQDPQVVS(0.99)PFS(0.0)R s:Phosphorylated S NFX1 130097.9 3 5 3026.1 62.9 HUMAN 1 3.6549 -13.8923 RQDRGEFSASPMLKS-p Q9UQ35;S1122-p RQDRGEFSASPMLKS 0.778250235060927 0.0643939943843267 0.0563333333333333 0.316333333333333 2.0916057509291 15.8583555126396 0.0563333333333333 0.316333333333333 0.617787938342931 0.0259516185283541 0.52899455845105 3.03891628532776 Q9UQ35 SRRM2 Q9UQ35.S1122.p_SRRM2 Q9UQ35_S1122s _1_1_1122_1122 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18121.18121.2 8.73 8.73 1.276 2 1 1 0 688.3314 1295.6867 S1122s Hydrogen 1119 (R) GEFsASPMLK (S) GEFS(0.99)AS(0.0)PMLK K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 10 60 2.1 3310.34 HUMAN 1 2.0916 15.8584 RQEDTHGSDGDGDGE-p Q8IY42;S279-p RQEDTHGSDGDGDGE 0.64300099764055 0.0376881526945584 -0.067 0.313 3.58450006751482 19.1278717514308 -0.067 0.313 0.438076536882853 0.0122239854657133 -0.836823648767812 3.69096842219913 Q8IY42 C4orf19 Q8IY42.S279.p_C4orf19 Q8IY42_S279s _1_1_279_279 Q8IY42 Q8IY42 Uncharacterized protein C4orf19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37068.37068.4 30.26 30.26 1.516 5 1 1 0 1479.1505 5833.6216 S279s TMT10 259 (K) GPVHAMPVVDSGNRQEDTHGsDGDGDGEIVDEDAAVAEALAALEAATAGEDLDETD (-) GPVHAMPVVDS(0.0)GNRQEDT(0.0)HGS(0.99)DGDGDGEIVDEDAAVAEALAALEAAT(0.0)AGEDLDET(0.0)D s:Phosphorylated S C4orf19 34254.4 2 9 703.1 239.48 HUMAN 1 -3.5845 19.1279 RQEEIDESDDDLDDK-p Q9ULH1-2;S720-p RQEEIDESDDDLDDK 0.269424134699647 0.0181749418560776 0.175666666666667 0.537333333333333 10.7942306025285 23.9642057160643 0.175666666666667 0.537333333333333 0.0832869464332421 0.00401401904199056 2.12009801944529 4.78048837458643 Q9ULH1 ASAP1 Q9ULH1.2.S720.p_ASAP1 Q9ULH1-2_S720s _1_1_720_720 Q9ULH1-2 Q9ULH1-2|A0A0A0MRE5 Isoform 1 of Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15802.15802.4 19.84 19.84 19.845 2 1 1 0 828.9307 3232.7243 S720s TMT10 714 (R) QEEIDEsDDDLDDKPSPIKK (E) QEEIDES(0.99)DDDLDDKPS(0.0)PIKK K:TMT10,s:Phosphorylated S ASAP1 126865.1 2 4 801.1 222.95 HUMAN 1 10.7942 23.9642 RQEEQRGSPPLRAEG-p Q8TB36;S11-p RQEEQRGSPPLRAEG 0.114363706149739 0.00663803760741578 0.283666666666667 0.584333333333333 19.6266621202139 31.2942832243285 0.283666666666667 0.584333333333333 0.0108976733972579 0.000742286697370935 3.79928219027788 6.82434797493835 Q8TB36 GDAP1 Q8TB36.S11.p_GDAP1 Q8TB36_S11s _1_1_11_11 Q8TB36 Q8TB36|E5RGI2 Ganglioside-induced differentiation-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5540.5744.4 16.55 16.55 99 1 1 1 0 598.0513 2309.2159 S11s Acetyl 2 (M) AERQEEQRGsPPLRAEGK (A) AERQEEQRGS(1.0)PPLRAEGK K:TMT10,s:Phosphorylated S GDAP1 41573.1 18 1 2664.1 74.6 HUMAN 1 19.6267 31.2943 RQEGPRKSPRQQQFL-p Q9UGU0;S1122-p RQEGPRKSPRQQQFL 0.0495990523839634 0.675055290843456 0.519333333333333 -0.0443333333333333 28.8522474890503 2.3324950685253 0.519333333333333 -0.0443333333333333 0.00130249255958187 0.584454212439438 6.09037690493846 -0.581166502816304 Q9UGU0 TCF20 Q9UGU0.S1122.p_TCF20 Q9UGU0_S1122s _1_1_1122_1122 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3194.3194.4 9.24 5.11 99 1 1 1 0 398.9724 1512.9011 S1122s TMT10 1116 (R) QEGPRKsPR (Q) QEGPRKS(1.0)PR K:TMT10,s:Phosphorylated S TCF20 213250.7 3 16 197.1 457.96 HUMAN 1 28.8522 -2.3325 RQEGRKDSLSVNEFK-p Q99584;S32-p RQEGRKDSLSVNEFK 0.619282776629408 0.0139388185480406 -0.081 0.686666666666667 3.86702803032761 25.7554944104627 -0.081 0.686666666666667 0.410484910464584 0.00265736101246719 -0.891625037310467 5.23091300373948 Q99584 S100A13 Q99584.S32.p_S100A13 Q99584_S32s _1_1_32_32 Q99584 Q99584 Protein S100-A13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13556.13556.3 11.64 11.64 1.1 2 1 1 0 802.099 2324.3177 S32s TMT10 26 (R) QEGRKDsLSVNEFK (E) QEGRKDS(0.99)LS(0.0)VNEFK K:TMT10,s:Phosphorylated S S100A13 11471 6 1 5331.1 20.44 HUMAN 1 -3.867 25.7555 RQEIESDSESDGELQ-p Q9BYW2;S1415-p RQEIESDSESDGELQ 0.867635849079879 0.0775282848153013 -0.028 0.202666666666667 1.20129741506794 14.7332445255417 -0.028 0.202666666666667 0.758350990759107 0.0336260262326801 -0.323636515948767 2.82676459992213 Q9BYW2 SETD2 Q9BYW2.S1415.p_SETD2 Q9BYW2_S1413sS1415sS1417s_3_3_1413_1417 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7629.7629.3 9.65 9.65 99 3 3 3 0 864.0187 2350.132 S1413s S1415s S1417s Hydrogen 1408 (R) RQEIEsDsEsDGELQDRK (K) RQEIES(1.0)DS(1.0)ES(1.0)DGELQDRK K:TMT10-Lys-Only,s:Phosphorylated S SETD2 290615.4 3 38 58.1 711.11 HUMAN 1 -1.2013 14.7332 RQENKRPSPRKLSSE-p Q9Y4B6;S197-p RQENKRPSPRKLSSE 0.839200328421563 0.18006669195997 0.0346666666666667 -0.359666666666667 1.47379712839476 9.79360441704053 0.0346666666666667 -0.359666666666667 0.712230040050497 0.104867172470258 0.388837986160259 -1.94510543182738 Q9Y4B6 VPRBP Q9Y4B6.S197.p_VPRBP Q9Y4B6_S197s _1_1_197_197 Q9Y4B6 Q9Y4B6|Q9Y4B6-2|Q9Y4B6-3 DDB1- and CUL4-associated factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11339.11339.5 13.43 12.34 99 1 1 1 0 592.3352 2877.6787 S197s Hydrogen 181 (R) ELQLQEVALRQENKRPsPRK (L) ELQLQEVALRQENKRPS(1.0)PRK K:TMT10-Lys-Only,s:Phosphorylated S DCAF1 170772.9 7 1 1102.1 177.43 HUMAN 1 1.4738 -9.7936 RQEQEKRSPLGSVRS-p Q92620;S1194-p RQEQEKRSPLGSVRS 0.411414426364872 0.0074845512145942 0.17 -0.540666666666667 7.1162934417501 30.400568358383 0.17 -0.540666666666667 0.194254306589639 0.000911891492896076 1.48135480642473 -6.54437319807607 Q92620 DHX38 Q92620.S1194.p_DHX38 Q92620_S1194s _1_1_1194_1194 Q92620 Q92620|Q92620-2 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6224.6224.4 8.16 4.85 4.348 2 1 1 0 513.7807 1972.134 S1194s TMT10 1188 (R) QEQEKRsPLGSVR (S) QEQEKRS(0.99)PLGS(0.0)VR K:TMT10,s:Phosphorylated S DHX38 141356.1 1 3 4343.1 33.14 HUMAN 1 7.1163 -30.4006 RQEQHRFSMDLKMPA-p Q92618;S670-p RQEQHRFSMDLKMPA 0.176409109456939 0.0156864256430834 0.26 0.509333333333333 14.9633812959233 24.9457269050861 0.26 0.509333333333333 0.0318905397964662 0.00320204410417929 2.87158612094971 5.02379160204615 Q92618 ZNF516 Q92618.S670.p_ZNF516 Q92618_S670s_1_1_670_670 Q92618 Q92618 Zinc finger protein 516 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8087.8087.3 7.21 1.8 0 1 1 1 0 778.0764 2236.2589 S670s M675m TMT10 669 (R) FsMDLKmPAFHPK (Q) FS(1.0)M(0.50)DLKM(0.50)PAFHPK K:TMT10,s:Phosphorylated S,m:Oxidized methionine ZNF516 126397.9 1 3 3011.1 63.33 HUMAN 1 14.9634 24.9457 RQGDDEQSDWFYEKE-p Q9NW75;S284-p RQGDDEQSDWFYEKE 0.21657303556267 0.988931562210736 0.513333333333333 0.005 12.8060159509787 0.0729156640288299 0.513333333333333 0.00500000000000002 0.0524080987690381 0.983350705262432 2.47617008960382 0.0218480020602311 Q9NW75 GPATCH2 Q9NW75.S284.p_GPATCH2 Q9NW75_S284s _1_1_284_284 Q9NW75 Q9NW75|Q9NW75-2 G patch domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20793.20793.3 13.3 13.3 5.894 2 1 1 0 728.9879 2104.9864 S284s TMT10 278 (R) QGDDEQsDWFYEK (E) QGDDEQS(0.99)DWFY(0.0)EK K:TMT10,s:Phosphorylated S GPATCH2 59341.9 1 5 1558.1 131.71 HUMAN 1 12.806 0.0729 RQGEGNRTPESQKRK-p A0AV02-2;T514-p RQGEGNRTPESQKRK 0.0291798921635941 0.866707262753281 0.643 -0.0196666666666667 35.8354981573688 0.875075381811845 0.643 -0.0196666666666667 0.000260885645704101 0.81750884807121 8.42377974176046 -0.242218536825403 A0AV02 SLC12A8 A0AV02.2.T514.p_SLC12A8 A0AV02-2_T514t _1_1_514_514 A0AV02-2 A0AV02-2|A0AV02-3|A0AV02-4|A0AV02-5 Isoform 2 of Solute carrier family 12 member 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3866.3866.3 12.49 7.86 3.092 2 1 1 0 623.6472 1788.9604 T514t TMT10 508 (R) QGEGNRtPESQK (R) QGEGNRT(0.99)PES(0.0)QK K:TMT10,t:Phosphorylated T SLC12A8 82733.5 4 1 3701.1 44.92 HUMAN 1 35.8355 -0.8751 RQGHLDRSFTCSTRS-p Q9P0U3;S57-p RQGHLDRSFTCSTRS 0.896873028140097 0.183313099831904 0.034 -0.187 0.926761336465506 9.69362188973568 0.034 -0.187 0.807837234009579 0.107309410977079 0.255405020278038 -1.92777497237277 Q9P0U3 SENP1 Q9P0U3.S57.p_SENP1 Q9P0U3_S57s _1_1_57_57 Q9P0U3 Q9P0U3|Q9P0U3-2|F8W0I8 Sentrin-specific protease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4854.4854.4 18.87 18.87 2.164 4 1 1 0 469.22 1793.8914 S57s TMT10 51 (R) QGHLDRsFTCSTR (S) QGHLDRS(0.99)FT(0.0)CS(0.0)T(0.0)R C:Carbamidomethylation,s:Phosphorylated S SENP1 74049.8 2 2 1420.1 144.33 HUMAN 1 0.9268 -9.6936 RQGIAVMTPTVPGSP-p Q9UPX8-3;T825-p RQGIAVMTPTVPGSP 0.185121577862873 0.948033082322748 0.279 0.00833333333333336 14.4114262085238 0.331956162432129 0.279 0.00833333333333336 0.036212405856082 0.926412451871507 2.76877516964448 0.0967343085104921 Q9UPX8 SHANK2 Q9UPX8.3.T825.p_SHANK2 Q9UPX8-3_T825t _1_1_825_825 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6|Q9UPX8-4|E7EUA2|Q9UPX8-2|B7ZKU9 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27723.27723.3 11.17 11.17 1.162 3 1 1 0 881.8126 2563.4632 T825t Hydrogen 819 (R) QGIAVMtPTVPGSPKAPFLGIPR (G) QGIAVMT(0.99)PT(0.0)VPGS(0.0)PKAPFLGIPR K:TMT10-Lys-Only,t:Phosphorylated T SHANK2 202341.2 6 7 86.1 628.23 HUMAN 1 14.4114 0.332 RQGNFFASPMLK___-p Q9H0H5;S628-p RQGNFFASPMLK___ 0.442299902006713 0.0112920875204421 0.140666666666667 -0.403333333333333 6.52763177827858 27.2655340135071 0.140666666666667 -0.403333333333333 0.222452259927352 0.00187692361549152 1.37804695585393 -5.63353750945168 Q9H0H5 RACGAP1 Q9H0H5.S628.p_RACGAP1 Q9H0H5_S628s _1_1_628_628 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25032.25032.3 13.25 13.25 99 1 1 1 0 593.3093 1697.9449 S628s TMT10 622 (R) QGNFFAsPMLK (-) QGNFFAS(1.0)PMLK K:TMT10,s:Phosphorylated S RACGAP1 71709.9 3 17 574.1 268.64 HUMAN 1 6.5276 -27.2655 RQGRGIKSPIRIGEE-p Q8IX21-2;S701-p RQGRGIKSPIRIGEE 0.919415137256337 0.0591148794902953 -0.019 -0.571333333333333 0.712384090541606 16.3642240071084 -0.019 -0.571333333333333 0.848714439284895 0.0230981713778853 -0.200090813033738 -3.13616241771671 Q8IX21 SLF2 Q8IX21.2.S701.p_SLF2 Q8IX21-2_S701s _1_1_701_701 Q8IX21-2 Q8IX21-2 Isoform 2 of SMC5-SMC6 complex localization factor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8977.8977.3 7.52 1.62 99 1 1 1 0 436.9321 1228.8142 S701s TMT10 698 (R) GIKsPIR (I) GIKS(1.0)PIR K:TMT10,s:Phosphorylated S SLF2 134456.8 1 10 1220.1 164.91 HUMAN 1 -0.7124 -16.3642 RQGSGRESPSLASRE-p Q8WWM7-3;S339-p RQGSGRESPSLASRE 0.176367789189959 0.640539541450107 0.222333333333333 0.0576666666666667 14.9668082524215 2.63475204150777 0.222333333333333 0.0576666666666667 0.0318653853471538 0.545161020525038 2.87222834715417 0.64511274871435 Q8WWM7 ATXN2L Q8WWM7.3.S339.p_ATXN2L Q8WWM7-3_S339s_1_1_339_339 Q8WWM7-3 Q8WWM7-3|H3BUF6|Q8WWM7-2|Q8WWM7-9|Q8WWM7-4|Q8WWM7-5|Q8WWM7-8|Q8WWM7-6|Q8WWM7-7 Isoform 3 of Ataxin-2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4433.4433.2 15.44 10.9 1.354 4 1 1 0 697.8064 1331.6662 Q333q S339s Hydrogen 333 (R) qGSGREsPSLASR (E) Q(1.0)GS(0.0)GRES(0.99)PS(0.0)LAS(0.0)R q:Pyroglutamic acid,s:Phosphorylated S ATXN2L 116093.7 5 12 184.1 476.17 HUMAN 1 14.9668 2.6348 RQILIACSPVSSVRK-p Q5QJE6;S117-p RQILIACSPVSSVRK 0.827264797305235 0.0169048692505771 0.034 -0.401 1.58417941803279 24.4472813489556 0.034 -0.401 0.694355785055089 0.0035914668743683 0.414611035592007 -4.8991991691537 Q5QJE6 DNTTIP2 Q5QJE6.S117.p_DNTTIP2 Q5QJE6_S117s _1_1_117_117 Q5QJE6 Q5QJE6|J3KP30 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20400.20400.3 16.53 16.53 4.464 3 1 1 0 580.3096 1658.9461 S117s TMT10 111 (R) QILIACsPVSSVR (K) QILIACS(0.99)PVS(0.0)S(0.0)VR C:Carbamidomethylation,s:Phosphorylated S DNTTIP2 84866.9 8 5 448.1 309.47 HUMAN 1 1.5842 -24.4473 RQIPVVGSVLNWFSP-p Q6P996;S646-p RQIPVVGSVLNWFSP 0.783485670526388 0.116907202644623 0.04 -0.301666666666667 2.03751781873467 12.2936033872496 0.04 -0.301666666666667 0.625530108205301 0.0589711587190185 0.517094691523151 -2.38329895650174 Q6P996 PDXDC1 Q6P996.S646.p_PDXDC1 Q6P996_S646s _1_1_646_646 Q6P996 H3BND4|Q6P996|Q6P996-5|Q6P996-4|Q6P996-3 Pyridoxal-dependent decarboxylase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.37421.37421.3 21.07 21.07 4.19 2 1 1 0 916.8461 2668.5591 S646s TMT10 640 (R) QIPVVGsVLNWFSPVQALQK (G) QIPVVGS(0.99)VLNWFS(0.0)PVQALQK K:TMT10,s:Phosphorylated S PDXDC1 87618.2 5 9 600.1 263.32 HUMAN 1 2.0375 -12.2936 RQKERAASPHQVTPQ-p Q96L73;S2471-p RQKERAASPHQVTPQ 0.909465039529785 0.977801541700258 -0.0176666666666667 0.00366666666666669 0.809144204176796 0.139810194820457 -0.0176666666666667 0.00366666666666667 0.830014309264823 0.968320175050952 -0.225294384342949 0.0415820543142262 Q96L73 NSD1 Q96L73.S2471.p_NSD1 Q96L73_S2471s _1_1_2471_2471 Q96L73 Q96L73|Q96L73-3|Q96L73-2 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7564.7564.3 17.5 17.5 6.526 2 1 1 0 673.0104 1937.0493 S2471s TMT10 2469 (R) AAsPHQVTPQADEK (M) AAS(0.99)PHQVT(0.0)PQADEK K:TMT10,s:Phosphorylated S NSD1 302295.2 4 13 601.1 263.26 HUMAN 1 -0.8091 0.1398 RQKIRHPSLGGLPIK-p Q9P241;S613-p RQKIRHPSLGGLPIK 0.102728705875057 0.24660626512283 -0.318 -0.12 20.8664550735982 8.01126276186693 -0.318 -0.12 0.00819133132314059 0.158078833979231 -4.06741798565362 -1.63659484455067 Q9P241 ATP10D Q9P241.S613.p_ATP10D Q9P241_S613s _1_1_613_613 Q9P241 Q9P241 Probable phospholipid-transporting ATPase VD HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17017.17017.4 10.2 10.2 99 1 1 1 0 457.2755 1746.1154 S613s TMT10 609 (K) IRHPsLGGLPIK (S) IRHPS(1.0)LGGLPIK K:TMT10,s:Phosphorylated S ATP10D 162210.8 2 3 2880.1 67.35 HUMAN 1 -20.8665 -8.0113 RQKKRNGSLPDCPPP-p Q99570;S755-p RQKKRNGSLPDCPPP 0.36150993011329 0.416418908734533 0.136 0.077 8.21325453726804 5.06053404712613 0.136 0.0770000000000001 0.150894894680693 0.31185060812676 1.67213568648657 1.11491215310828 Q99570 PIK3R4 Q99570.S755.p_PIK3R4 Q99570_S755s _1_1_755_755 Q99570 Q99570 Phosphoinositide 3-kinase regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27492.27492.4 21.08 21.08 99 1 1 1 0 757.6603 2947.653 S755s TMT10 753 (R) NGsLPDCPPPEDPAIAQLLKK (L) NGS(1.0)LPDCPPPEDPAIAQLLKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PIK3R4 154412.9 2 1 2103.1 97.58 HUMAN 1 8.2133 5.0605 RQKNHPMTPEAVKAN-p P51659;T265-p RQKNHPMTPEAVKAN 0.43676275365902 0.321432765920206 -0.178333333333333 0.0963333333333334 6.62450169493107 6.51709952188891 -0.178333333333333 0.0963333333333334 0.217545362903565 0.222992392854045 -1.39511048956846 1.3758358323732 P51659 HSD17B4 P51659.T265.p_HSD17B4 P51659_T265t _1_1_265_265 P51659 P51659-2|P51659-3|E7EWE5|E7ET17|G5E9S2|E7ER27 Peroxisomal multifunctional enzyme type 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8323.8323.3 16.11 16.11 99 1 1 1 0 554.6212 1581.8823 T265t TMT10 261 (K) NHPMtPEAVK (A) NHPMT(1.0)PEAVK K:TMT10,t:Phosphorylated T HSD17B4 80141.3 5 2 1401.1 146.42 HUMAN 1 -6.6245 6.5171 RQKRSQGSSQFRSQG-p Q15172;S41-p RQKRSQGSSQFRSQG 0.528821908499878 0.96291783884833 0.108666666666667 -0.00499999999999997 5.12004371254442 0.233887797221244 0.108666666666667 -0.00499999999999996 0.307606585341203 0.947569820525515 1.1260119206595 -0.0688592929147093 Q15172 PPP2R5A Q15172.S41.p_PPP2R5A Q15172_S41s _1_1_41_41 Q15172 Q15172 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4917.5257.2 11.8 5.05 1.102 3 1 1 0 603.2802 1125.585 S41s TMT10 38 (R) SQGsSQFR (S) S(0.0)QGS(0.99)S(0.0)QFR s:Phosphorylated S PPP2R5A 56535 2 3 2567.1 78.3 HUMAN 1 5.12 -0.2339 RQLKRHLSMQSFDES-p Q8N4C6-7;S269-p RQLKRHLSMQSFDES 0.471941186312508 0.0705887157471207 -0.210666666666667 -0.247333333333333 6.01723203662301 15.3064016149883 -0.210666666666667 -0.247333333333333 0.250193945755641 0.0294686227112823 -1.28763276557425 -2.93415421491657 Q8N4C6 NIN Q8N4C6.7.S269.p_NIN Q8N4C6-7_S269s _1_1_269_269 Q8N4C6-7 Q8N4C6-7|Q8N4C6-10 Isoform 7 of Ninein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6556.6556.4 14.24 14.24 2.245 3 1 1 0 504.4931 1934.9816 S269s TMT10 266 (K) RHLsMQSFDESGRR (T) RHLS(0.99)MQS(0.0)FDES(0.0)GRR s:Phosphorylated S NIN 250243.4 1 4 2284.1 89.71 HUMAN 1 -6.0172 -15.3064 RQLMASPSQDMEMPL-p Q01974;S449-p RQLMASPSQDMEMPL 0.365755403490374 0.0739670197242903 -0.124333333333333 -0.209 8.10682943379636 15.0093134341586 -0.124333333333333 -0.209 0.154638296419614 0.0315550342999584 -1.65368773265073 -2.87831844383487 Q01974 ROR2 Q01974.S449.p_ROR2 Q01974_S449s _1_1_449_449 Q01974 Q01974|B1APY4 Tyrosine-protein kinase transmembrane receptor ROR2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24565.24565.3 20.73 20.73 2.592 2 1 1 0 912.7836 2656.3661 S449s TMT10 443 (R) QLMASPsQDMEMPLINQHK (Q) Q(0.0)LM(0.0)AS(0.0)PS(0.99)QDM(0.0)EM(0.0)PLIN(0.0)QHK K:TMT10,s:Phosphorylated S ROR2 106410.1 4 1 5309.1 20.73 HUMAN 1 -8.1068 -15.0093 RQLRKVRSVELDQLP-p Q13233;S67-p RQLRKVRSVELDQLP 0.614617666332898 0.889469027764128 0.0716666666666667 -0.0193333333333333 3.92389740938196 0.713316363354554 0.0716666666666667 -0.0193333333333333 0.405144790593447 0.848532270615436 0.902554317458114 -0.200316534020826 Q13233 MAP3K1 Q13233.S67.p_MAP3K1 Q13233_S67s _1_1_67_67 Q13233 Q13233 Mitogen-activated protein kinase kinase kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28871.28871.5 27.3 21 11.401 10 1 1 0 1151.7892 5674.8979 S67s TMT10 65 (K) VRsVELDQLPEQPLFLAASPPASSTSPSPEPADAAGSGTGFQPVAVPPPHGAASR (G) VRS(0.99)VELDQLPEQPLFLAAS(0.0)PPAS(0.0)S(0.0)T(0.0)S(0.0)PS(0.0)PEPADAAGS(0.0)GT(0.0)GFQPVAVPPPHGAAS(0.0)R s:Phosphorylated S MAP3K1 166521 1 3 505.1 289.91 HUMAN 1 3.9239 -0.7133 RQLSEEPSPRSSPLL-p Q2M3V2;S248-p RQLSEEPSPRSSPLL 0.474773316010134 0.974718273747839 0.189666666666667 0.00633333333333334 5.9597810260179 0.157184824789738 0.189666666666667 0.00633333333333331 0.253525645648457 0.964453997529424 1.27739557924831 0.046660816791955 Q2M3V2 NotFound Q2M3V2.S248.p_NotFound Q2M3V2_S248s _1_1_248_248 Q2M3V2 Q2M3V2 Ankyrin repeat domain-containing protein SOWAHA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7351.7351.2 11.76 8.54 4.85 2 1 1 0 676.3261 1271.6793 S248s TMT10 242 (R) QLSEEPsPR (S) QLS(0.0)EEPS(0.99)PR s:Phosphorylated S SOWAHA 57612.8 1 1 2717.1 72.95 HUMAN 1 5.9598 0.1572 RQLSLEGSGLGVEDL-p Q9UMZ2;S756-p RQLSLEGSGLGVEDL 0.255903152682223 0.0121567318783698 -0.319 0.480666666666667 11.24762858532 26.7422339682351 -0.319 0.480666666666667 0.0750303792187352 0.00211727175125796 -2.19954987036706 5.49151591734236 Q9UMZ2 SYNRG Q9UMZ2.S756.p_SYNRG Q9UMZ2_S756s _1_1_756_756 Q9UMZ2 Q9UMZ2|Q9UMZ2-5 Synergin gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26030.26030.3 10.61 10.61 3.773 2 1 1 0 695.0419 2003.1425 S756s TMT10 750 (R) QLSLEGsGLGVEDLK (D) QLS(0.0)LEGS(0.99)GLGVEDLK K:TMT10,s:Phosphorylated S SYNRG 141393.5 1 6 236.1 418.49 HUMAN 1 -11.2476 26.7422 RQLSRPKSAEPPRSP-p Q6P0Q8;S1393-p RQLSRPKSAEPPRSP 0.0887698163036001 0.0700542827318938 -0.547666666666667 -0.255666666666667 22.4067574634379 15.3508391364431 -0.547666666666667 -0.255666666666667 0.00574545270037781 0.0291686336814931 -4.41556933525795 -2.94253853997349 Q6P0Q8 MAST2 Q6P0Q8.S1393.p_MAST2 Q6P0Q8_S1393s _1_1_1393_1393 Q6P0Q8 O15021|J3QT34|O15021-1|E7EWQ5|O15021-3|O15021-2|Q6P0Q8|Q6P0Q8-2|Q9Y2H9 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14082.14082.3 12.65 9.82 12.652 2 1 1 0 578.3305 1653.01 S1393s TMT10 1393 (K) sAEPPRSPLLK (R) S(0.99)AEPPRS(0.0)PLLK K:TMT10,s:Phosphorylated S MAST2 197687.5 1 60 121.1 549.41 HUMAN 1 -22.4068 -15.3508 RQLSSGVSEIRHTAD-p P04792;S86-p RQLSSGVSEIRHTAD 0.233628206047255 0.970454431549133 0.224333333333333 -0.00733333333333328 12.1085814051856 0.184994161671096 0.224333333333333 -0.00733333333333325 0.0615377849075482 0.958298004569388 2.35160880213494 -0.0547505758776524 P04792 HSPB1 P04792.S86.p_HSPB1 P04792_S86s _1_1_86_86 P04792 P04792|F8WE04 Heat shock protein beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15989.15989.4 14.68 14.68 1.215 4 1 1 0 577.5447 2227.1893 S86s TMT10 80 (R) QLSSGVsEIRHTADRWR (V) QLS(0.0)S(0.0)GVS(0.99)EIRHT(0.0)ADRWR s:Phosphorylated S HSPB1 22839.1 2 8 357.1 346.69 HUMAN 1 12.1086 -0.185 RQLSSSSSYSGDISR-p P33527-9;S929-p RQLSSSSSYSGDISR 0.42064448546641 0.630984865857374 0.125333333333333 0.055 6.93812582098641 2.71884860651634 0.125333333333333 0.055 0.202389239223893 0.534706100897768 1.45017806002871 0.662616826395809 P33527 ABCC1 P33527.9.S929.p_ABCC1 P33527-9_S928sS929s_2_2_928_929 P33527-9 P33527-9|P33527-3 Isoform 9 of Multidrug resistance-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12266.12681.2 12.9 12.9 1.129 8 2 2 0 931.8917 1702.8445 S928s S929s TMT10 923 (R) QLSSSssYSGDISR (H) QLS(0.0)S(0.0)S(0.0)S(0.99)S(0.99)Y(0.0)S(0.0)GDIS(0.0)R s:Phosphorylated S ABCC1 174063.4 1 6 3098.1 60.69 HUMAN 1 6.9381 2.7188 RQMQRSYTAPDKTGI-p O94964-2;T1243-p RQMQRSYTAPDKTGI 0.0654149293186431 0.189843568691221 -0.529333333333333 -0.204 25.5782420206997 9.49012846744065 -0.529333333333333 -0.204 0.00276806190158964 0.112457170783255 -5.19173433045792 -1.89252567823153 O94964 SOGA1 O94964.2.T1243.p_SOGA1 O94964-2_T1243t _1_1_1243_1243 O94964-2 O94964-2|O94964-3 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8817.8817.2 8.86 5.98 2.919 3 1 1 0 660.3358 1239.6985 T1243t TMT10 1241 (R) SYtAPDK (T) S(0.0)Y(0.0)T(0.99)APDK K:TMT10,t:Phosphorylated T SOGA1 185623.3 1 13 215.1 433.51 HUMAN 1 -25.5782 -9.4901 RQMSLCGTPEKSSYR-p Q9UPU5;T1289-p RQMSLCGTPEKSSYR 0.125743941781331 0.00415615768684408 0.299666666666667 -0.581 18.7211690502831 35.0412523053913 0.299666666666667 -0.581 0.0134240355923997 0.000313238235918042 3.60971515711843 -8.10941237998053 Q9UPU5 USP24 Q9UPU5.T1289.p_USP24 Q9UPU5_T1289t _1_1_1289_1289 Q9UPU5 Q9UPU5 Ubiquitin carboxyl-terminal hydrolase 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13456.13456.3 15.27 15.27 5.79 2 1 1 0 563.6103 1608.849 T1289t TMT10 1283 (R) QMSLCGtPEK (S) QMS(0.0)LCGT(0.99)PEK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T USP24 297383.8 3 130 8.4 1346.57 HUMAN 1 18.7212 -35.0413 RQMSSQNSPSRLNIQ-p Q15788;S569-p RQMSSQNSPSRLNIQ 0.124542516675675 0.00994130061946245 0.331666666666667 0.458333333333333 18.8217937118844 28.1506535085307 0.331666666666667 0.458333333333333 0.0131165804950068 0.00153085708725145 3.63053245677807 5.88002944184221 Q15788 NCOA1 Q15788.S569.p_NCOA1 Q15788_S569s _1_1_569_569 Q15788 Q15788 Nuclear receptor coactivator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12652.12652.3 13.01 8.48 1.726 4 1 1 0 808.757 2344.2807 S569s TMT10 563 (R) QMSSQNsPSRLNIQPAK (A) QMS(0.0)S(0.0)QNS(0.99)PS(0.0)RLNIQPAK K:TMT10,s:Phosphorylated S NCOA1 158066.1 3 5 1320.1 154.47 HUMAN 1 18.8218 28.1507 RQNFRPPTPPYPGPG-p Q8TAP9;T10-p RQNFRPPTPPYPGPG 0.395179917614244 0.0293660896783938 0.117 0.294666666666667 7.44144871220874 20.7389491745958 0.117 0.294666666666667 0.180241639354599 0.00843538836988425 1.53808641211752 4.03540677293759 Q8TAP9 MPLKIP Q8TAP9.T10.p_MPLKIP Q8TAP9_T10t _1_1_10_10 Q8TAP9 Q8TAP9 M-phase-specific PLK1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21170.21170.4 19.36 16.36 1.839 5 1 1 0 718.0906 2789.3746 T10t TMT10 4 (R) QNFRPPtPPYPGPGGGGWGSGSSFR (G) QNFRPPT(0.99)PPY(0.0)PGPGGGGWGS(0.0)GS(0.0)S(0.0)FR t:Phosphorylated T MPLKIP 19203.6 3 1 1651.1 123.4 HUMAN 1 7.4414 20.7389 RQNFSSQSLEHVEKE-p Q2NKX8;S971-p RQNFSSQSLEHVEKE 0.994556694699213 0.193014792451486 -0.00133333333333334 -0.241 0.0478064095253461 9.39384090380394 -0.00133333333333333 -0.241 0.989052531899821 0.114978307010303 -0.0143663339417025 -1.8758558184323 Q2NKX8 ERCC6L Q2NKX8.S971.p_ERCC6L Q2NKX8_S971s _1_1_971_971 Q2NKX8 Q2NKX8|B5MDQ0 DNA excision repair protein ERCC-6-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12664.12664.3 16.62 16.62 2.289 3 1 1 0 691.0149 1991.0598 S971s TMT10 965 (R) QNFSSQsLEHVEK (E) QNFS(0.0)S(0.0)QS(0.99)LEHVEK K:TMT10,s:Phosphorylated S ERCC6L 142070.4 1 7 422.1 320.12 HUMAN 1 -0.0478 -9.3938 RQNGSNDSDRYSDNE-p P42167;S180-p RQNGSNDSDRYSDNE 0.857564991790625 0.0453960353890061 0.0283333333333333 0.248333333333333 1.30086375197838 17.9721235917826 0.0283333333333333 0.248333333333333 0.741162819552733 0.0159509899285946 0.347732661620728 3.45380382677583 P42167 TMPO P42167.S180.p_TMPO P42167_S180sS184s_2_2_180_184 P42167 P42167|G5E972|P42167-2|P42167-3 Lamina-associated polypeptide 2, isoforms beta/gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18383.18383.5 12.99 12.99 1.13 13 2 2 0 1004.6714 4859.4022 S180s S184s TMT10 158 (R) SSTPLPTISSSAENTRQNGSNDsDRYsDNEEDSKIELK (L) S(0.0)S(0.0)T(0.0)PLPT(0.0)IS(0.0)S(0.0)S(0.0)AENT(0.0)RQNGS(0.0)NDS(0.99)DRY(0.0)S(0.99)DNEEDS(0.0)KIELK K:TMT10,s:Phosphorylated S TMPO 50726.4 75 46 123.2 546.19 HUMAN 2 1.3009 17.9721 RQNQRRFSMEDVSKR-p Q07002-2;S89-p RQNQRRFSMEDVSKR 0.313934747378777 0.337511825351373 -0.191666666666667 0.0983333333333333 9.41297716061775 6.24896010786044 -0.191666666666667 0.0983333333333334 0.11447279424435 0.237194158488509 -1.87987861461795 1.32846662906264 Q07002 CDK18 Q07002.2.S89.p_CDK18 Q07002-2_S89s _1_1_89_89 Q07002-2 Q07002-2 Isoform 2 of Cyclin-dependent kinase 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13953.13953.3 8.68 8.68 5.242 2 1 1 0 546.277 1556.8507 S89s TMT10 87 (R) RFsMEDVSK (R) RFS(0.99)MEDVS(0.0)K K:TMT10,s:Phosphorylated S CDK18 54765.8 5 4 1225.1 164.54 HUMAN 1 -9.413 6.249 RQNSSSGSPRMEICS-p Q15648;S675-p RQNSSSGSPRMEICS 0.541115801504562 0.467320235639802 0.202 0.146 4.91924560027112 4.4048884989463 0.202 0.146 0.322162836194067 0.362669597328687 1.08923844495792 0.993594422246749 Q15648 MED1 Q15648.S675.p_MED1 Q15648_S675s _1_1_675_675 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.1578.2065.2 8.38 5.07 2.228 4 1 1 0 614.78 1148.5857 S675s TMT10 669 (R) QNSSSGsPR (M) QNS(0.0)S(0.0)S(0.0)GS(0.99)PR s:Phosphorylated S MED1 169445 1 4 115.1 566.87 HUMAN 1 4.9192 4.4049 RQPAQELSPTPGGTA-p Q9UPN4-2;S381-p RQPAQELSPTPGGTA 0.739118396287836 0.00901683866038459 0.046 -0.532666666666667 2.48842365098719 28.9445802403291 0.046 -0.532666666666667 0.563842275264019 0.00127509333588526 0.614442160258902 -6.1080908608351 Q9UPN4 CEP131 Q9UPN4.2.S381.p_CEP131 Q9UPN4-2_S381s _1_1_381_381 Q9UPN4-2 Q9UPN4|Q9UPN4-2|I3L2J8|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11926.11926.3 19.54 19.54 2.21 3 1 1 0 823.768 2389.324 S381s TMT10 375 (R) QPAQELsPTPGGTAHQALK (A) QPAQELS(0.99)PT(0.0)PGGT(0.0)AHQALK K:TMT10,s:Phosphorylated S CEP131 122301.7 8 12 359.1 345.98 HUMAN 1 2.4884 -28.9446 RQPGALAYGAFGPPS-p Q96RK1;Y64-p RQPGALAYGAFGPPS 0.995222800843425 0.400422596323296 -0.001 -0.083 0.0387849624234697 5.2862746238986 -0.00100000000000001 -0.083 0.991109191443179 0.296055093690111 -0.0116672230848254 -1.15602504779643 Q96RK1 CITED4 Q96RK1.Y64.p_CITED4 Q96RK1_Y64yS71sS72s_3_3_64_72 Q96RK1 Q96RK1 Cbp/p300-interacting transactivator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.39721.39721.5 8.66 1.52 2.112 5 3 3 0 1172.5714 5619.0167 Y64y S71s S72s TMT10 46 (R) PRGAPLGPPPPRQPGALAyGAFGPPssFQPFPAVPPPAAGIAHLQPVATPYPGR (A) PRGAPLGPPPPRQPGALAY(0.99)GAFGPPS(0.99)S(0.99)FQPFPAVPPPAAGIAHLQPVAT(0.0)PY(0.0)PGR y:Phosphorylated Y,s:Phosphorylated S CITED4 18682.9 6 2 6925.1 8.66 HUMAN 1 -0.0388 -5.2863 RQQAEEASQESENEL-p P78380;S95-p RQQAEEASQESENEL 0.561579394570095 0.00179932178180885 -0.0926666666666667 0.954333333333333 4.61263781514573 43.2346049937139 -0.0926666666666667 0.954333333333334 0.345729325177453 4.7483147659015e-05 -1.03256824724954 11.6864792388882 P78380 OLR1 P78380.S95.p_OLR1 P78380_S95s _1_1_95_95 P78380 P78380|P78380-3|P78380-2|F5GZH1 Oxidized low-density lipoprotein receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10009.10009.2 19.56 19.56 2.387 2 1 1 0 1129.5322 2178.0926 S95s TMT10 89 (R) QQAEEAsQESENELK (E) QQAEEAS(0.99)QES(0.0)ENELK K:TMT10,s:Phosphorylated S OLR1 31472.3 2 1 5416.1 19.56 HUMAN 1 -4.6126 43.2346 RQQGSSLSGSKDNVE-p Q14161;S363-p RQQGSSLSGSKDNVE 0.409041787828506 0.509514256180378 -0.133 -0.0706666666666666 7.15733811244164 3.92568728646457 -0.133 -0.0706666666666666 0.192427079594227 0.404977850879731 -1.48852729017242 -0.902746938619005 Q14161 GIT2 Q14161.S363.p_GIT2 Q14161_S363s _1_1_363_363 Q14161 Q14161|Q14161-3|Q14161-5|Q14161-4|F8VXI9|Q14161-8|Q14161-10|F8WAK2|Q14161-6|Q14161-7|Q14161-11|Q14161-2|F8W822 ARF GTPase-activating protein GIT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6422.6422.2 8.66 8.66 1.104 4 1 1 0 758.894 1436.8109 S363s TMT10 357 (R) QQGSSLsGSK (D) QQGS(0.0)S(0.0)LS(0.99)GS(0.0)K K:TMT10,s:Phosphorylated S GIT2 85168.8 9 2 474.1 301.74 HUMAN 1 -7.1573 -3.9257 RQQLQALSEPQPRLQ-p Q8NBJ4;S204-p RQQLQALSEPQPRLQ 0.567246377055338 0.383850077579025 -0.0766666666666667 -0.147666666666667 4.5359880047093 5.52708402524004 -0.0766666666666667 -0.147666666666667 0.35188536073323 0.280086126512111 -1.01829464564746 -1.19956767262781 Q8NBJ4 GOLM1 Q8NBJ4.S204.p_GOLM1 Q8NBJ4_S204s _1_1_204_204 Q8NBJ4 Q8NBJ4|Q8NBJ4-2 Golgi membrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11962.11962.3 11.82 11.82 99 1 1 1 0 568.6279 1623.9016 S204s TMT10 198 (R) QQLQALsEPQPR (L) QQLQALS(1.0)EPQPR s:Phosphorylated S GOLM1 45503.6 1 3 1754.1 117.54 HUMAN 1 -4.536 -5.5271 RQQRKEQTLQGAEED-p Q92692;T390-p RQQRKEQTLQGAEED 0.645166976093224 0.119937375227062 0.252 0.7155 3.56295031249771 12.1449676568625 0.252 0.7155 0.44025568099723 0.0610243601284308 0.847510479252474 2.49773255212635 Q92692 PVRL2 Q92692.T390.p_PVRL2 Q92692_T390t _1_1_390_390 Q92692 Q92692 Nectin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16490.16490.4 24.48 24.48 14.913 4 1 1 0 970.7527 3800.0412 T390t TMT10 387 (R) KEQtLQGAEEDEDLEGPPSYKPPTPK (A) KEQT(0.99)LQGAEEDEDLEGPPS(0.0)Y(0.0)KPPT(0.0)PK K:TMT10,t:Phosphorylated T NECTIN2 58197.4 1 1 1687.1 120.88 HUMAN 1 3.563 12.145 RQQRKRVSLEPHQGP-p Q14980;S1991-p RQQRKRVSLEPHQGP 0.259311710735691 0.0101016889752398 0.171666666666667 -0.605 11.1314793914977 28.0393483713414 0.171666666666667 -0.605 0.0770640911315872 0.00157059844402579 2.17915957292436 -5.84858954235951 Q14980 NUMA1 Q14980.S1991.p_NUMA1 Q14980_S1991s _1_1_1991_1991 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8413.8413.4 15.48 15.48 6.2 3 1 1 0 654.3641 2534.4658 S1991s TMT10 1988 (R) KRVsLEPHQGPGTPESK (K) KRVS(0.99)LEPHQGPGT(0.0)PES(0.0)K K:TMT10,s:Phosphorylated S NUMA1 239339.3 3 31 31.1 900.97 HUMAN 1 11.1315 -28.0393 RQQRVTKSPAPVHRG-p Q9NRA8;S670-p RQQRVTKSPAPVHRG 0.883710246902233 0.147198805117803 0.022 -0.209333333333333 1.0614120181881 10.954218699637 0.022 -0.209333333333333 0.783174968314071 0.080274596273033 0.289212829628935 -2.14712738993718 Q9NRA8 EIF4ENIF1 Q9NRA8.S670.p_EIF4ENIF1 Q9NRA8_S670s _1_1_670_670 Q9NRA8 Q9NRA8|B1AKL4|Q9NRA8-2 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5687.5687.4 10.1 10.1 1.37 2 1 1 0 408.2367 1549.9579 S670s TMT10 667 (R) VTKsPAPVHR (G) VT(0.0)KS(0.99)PAPVHR K:TMT10,s:Phosphorylated S EIF4ENIF1 108541.3 5 18 150.1 511.59 HUMAN 1 1.0614 -10.9542 RQRAADSSDSDGAEE-p P16383;S17-p RQRAADSSDSDGAEE 0.992821359885708 0.542991428044876 0.00666666666666667 -0.161333333333333 0.0655242340753385 3.5666600473996 0.00666666666666672 -0.161333333333333 0.985025733804793 0.439879776034024 0.0196513882080203 -0.833203413177039 P16383 GCFC2 P16383.S17.p_GCFC2 P16383_S16sS17sS19s_3_3_16_19 P16383 P16383|P16383-2|P16383-4|P16383-3 GC-rich sequence DNA-binding factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8342.8926.3 14 14 3.988 4 3 3 0 828.9728 2245.0054 S16s S17s S19s TMT10 13 (R) AADssDsDGAEESPAEPGAPR (E) AADS(0.99)S(0.99)DS(0.99)DGAEES(0.0)PAEPGAPR s:Phosphorylated S GCFC2 89953.6 2 8 2330.1 87.66 HUMAN 1 0.0655 -3.5667 RQRASQDTEDEESGA-p O15234;T13-p RQRASQDTEDEESGA 0.82619699417303 0.104828823135371 -0.037 0.316333333333333 1.59960578782568 12.9415279044793 -0.037 0.316333333333333 0.691893771755907 0.0507980696903019 -0.418185524098959 2.49917205493939 O15234 CASC3 O15234.T13.p_CASC3 O15234_S10sT13t_2_2_10_13 O15234 O15234 Protein CASC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6739.6739.3 11.84 11.84 3.12 7 2 2 0 971.3977 2752.2455 S10s T13t TMT10 7 (R) QRAsQDtEDEESGASGSDSGGSPLR (G) QRAS(0.99)QDT(0.99)EDEES(0.0)GAS(0.0)GS(0.0)DS(0.0)GGS(0.0)PLR s:Phosphorylated S,t:Phosphorylated T CASC3 76390.7 2 13 323.1 362.08 HUMAN 1 -1.5996 12.9415 RQREKQGSKVQESTK-p O43390;S113-p RQREKQGSKVQESTK 0.0953221604306548 0.0210017799591509 0.959333333333333 -0.911666666666667 21.6556289134613 22.947521896933 0.959333333333333 -0.911666666666667 0.00683025800023251 0.00507280081913155 4.24362155765598 -4.53696621310291 O43390 HNRNPR O43390.S113.p_HNRNPR O43390_S113s _1_1_113_113 O43390 O43390-2 Heterogeneous nuclear ribonucleoprotein R HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7844.7844.5 11.87 11.87 11.869 3 1 1 0 635.1578 3091.7972 S113s TMT10 109 (R) EKQGsKVQESTKGPDEAK (I) EKQGS(0.99)KVQES(0.0)T(0.0)KGPDEAK K:TMT10,s:Phosphorylated S HNRNPR 71227 1 3 1376.2 148.68 HUMAN 1 21.6556 -22.9475 RQREKVASDTEEADR-p Q9P2R6;S656-p RQREKVASDTEEADR 0.924466206150438 0.864358031273441 -0.0146666666666667 0.021 0.671591572475357 0.892798577896368 -0.0146666666666667 0.021 0.856723821453745 0.814179460649165 -0.189342596261301 0.246743639482387 Q9P2R6 RERE Q9P2R6.S656.p_RERE Q9P2R6_S656s _1_1_656_656 Q9P2R6 Q9P2R6|B1AKN3|Q9P2R6-2 Arginine-glutamic acid dipeptide repeats protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6749.6749.4 16.26 16.26 1.229 5 1 1 0 630.826 2440.3134 S656s TMT10 652 (R) EKVAsDTEEADRTSSK (K) EKVAS(0.99)DT(0.0)EEADRT(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S RERE 173561.6 13 8 278.1 389.04 HUMAN 1 -0.6716 0.8928 RQRFLPGSPRLEGHA-p Q3MIP1;S78-p RQRFLPGSPRLEGHA 0.469686395123555 0.466719185736756 0.158333333333333 -0.256333333333333 6.06102499808043 4.41257434997967 0.158333333333333 -0.256333333333333 0.247683741902497 0.362028336715943 1.29542740010591 -0.995035170702285 Q3MIP1 ITPRIPL2 Q3MIP1.S78.p_ITPRIPL2 Q3MIP1_S78s _1_1_78_78 Q3MIP1 Q3MIP1 Inositol 1,4,5-trisphosphate receptor-interacting protein-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16139.16139.2 10.96 4.37 99 1 1 1 0 541.7837 1002.5934 S78s TMT10 74 (R) FLPGsPR (L) FLPGS(1.0)PR s:Phosphorylated S ITPRIPL2 59415.1 2 1 6556.1 10.96 HUMAN 1 6.061 -4.4126 RQRLTHLSPEEKALR-p P17861-2;S68-p RQRLTHLSPEEKALR 0.295243174589512 0.0895540620641122 -0.169 -0.201666666666667 9.97782410356022 13.8678420498931 -0.169 -0.201666666666667 0.100511924765636 0.0410407978463525 -1.97785799146413 -2.66710434069113 P17861 XBP1 P17861.2.S68.p_XBP1 P17861-2_S68s _1_1_68_68 P17861-2 P17861-2|B1AHH2 Isoform 2 of X-box-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12184.12184.3 11.36 11.36 11.361 2 1 1 0 531.2871 1511.8834 S68s TMT10 64 (R) LTHLsPEEK (A) LT(0.0)HLS(0.99)PEEK K:TMT10,s:Phosphorylated S XBP1 40375.7 3 2 4665.1 28.22 HUMAN 1 -9.9778 -13.8678 RQRPDLGSAQKGLQV-p P33991;S120-p RQRPDLGSAQKGLQV 0.862120390295491 0.000993050805672115 0.026 -1.721 1.25824424414828 52.5788458779474 0.026 -1.721 0.748472029923649 5.5222417138158e-06 0.33745815534068 -17.5410877180399 P33991 MCM4 P33991.S120.p_MCM4 P33991_S120s _1_1_120_120 P33991 P33991 DNA replication licensing factor MCM4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6830.6830.3 10.13 6.03 99 1 1 1 0 546.6314 1557.9113 S120s TMT10 114 (R) QRPDLGsAQK (G) QRPDLGS(1.0)AQK K:TMT10,s:Phosphorylated S MCM4 97126.8 5 5 1487.1 137.87 HUMAN 1 1.2582 -52.5788 RQRQLIMSPLITSHV-p Q9H7D0;S365-p RQRQLIMSPLITSHV 0.475726626039854 0.265044526652652 0.101 0.177333333333333 5.94090186470159 7.59456496151817 0.101 0.177333333333333 0.2546301427576 0.173997698508685 1.27402857831622 1.56426897883652 Q9H7D0 DOCK5 Q9H7D0.S365.p_DOCK5 Q9H7D0_S365s_1_1_365_365 Q9H7D0 Q9H7D0 Dedicator of cytokinesis protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33877.33877.3 13.36 13.36 1.292 5 1 1 0 1091.6023 3191.8114 S365s N376n TMT10 361 (R) QLIMsPLITSHVIGEnEPLTSVLNK (V) QLIMS(0.99)PLIT(0.0)S(0.0)HVIGEN(0.99)EPLT(0.0)S(0.0)VLN(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated DOCK5 216331.8 1 1 828.1 217.17 HUMAN 1 5.9409 7.5946 RQRQRDASPGRGSHG-p P17600;S427-p RQRQRDASPGRGSHG 0.880578075090593 0.37288104214687 0.023 0.12 1.08663112879999 5.6837154536231 0.023 0.12 0.778640316897266 0.270164607691463 0.295469958579551 1.22773063116794 P17600 SYN1 P17600.S427.p_SYN1 P17600_S427s _1_1_427_427 P17600 P17600|P17600-2 Synapsin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9859.9859.3 15.95 9.48 1.661 4 1 1 0 808.7377 2344.2319 S427s TMT10 425 (R) DAsPGRGSHGQTPSPGALPLGR (Q) DAS(0.99)PGRGS(0.0)HGQT(0.0)PS(0.0)PGALPLGR s:Phosphorylated S SYN1 74281.2 5 3 2174.1 94.5 HUMAN 1 1.0866 5.6837 RQRSDQDSDSDQPSR-p Q6PD62;S1085-p RQRSDQDSDSDQPSR 0.0332552830156115 0.0289406662787547 0.677 0.457 34.556434937717 20.8321971296341 0.677 0.457 0.000350232550029327 0.00825620156231485 7.94749189700717 4.05587049769878 Q6PD62 CTR9 Q6PD62.S1085.p_CTR9 Q6PD62_S1085s _1_1_1085_1085 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4397.4397.2 14 14 1.481 4 1 1 0 1001.9601 1922.9456 S1085s TMT10 1081 (R) SDQDsDSDQPSRK (R) S(0.0)DQDS(0.99)DS(0.0)DQPS(0.0)RK K:TMT10,s:Phosphorylated S CTR9 134412.8 4 9 152.1 508.81 HUMAN 1 34.5564 20.8322 RQRSLGPSLATDKS_-p Q9H3N1;S274-p RQRSLGPSLATDKS_ 0.618803324936163 0.115480981947455 0.0706666666666667 -0.168333333333333 3.87328117379751 12.3686931368896 0.0706666666666667 -0.168333333333333 0.409894303370627 0.0579603082232707 0.892828379698738 -2.3966670985631 Q9H3N1 TMX1 Q9H3N1.S274.p_TMX1 Q9H3N1_S274s _1_1_274_274 Q9H3N1 Q9H3N1 Thioredoxin-related transmembrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16883.16883.2 9.42 3.12 2.259 4 1 1 0 807.4339 1533.8888 S274s TMT10 270 (R) SLGPsLATDKS (-) S(0.0)LGPS(0.99)LAT(0.0)DKS(0.0) K:TMT10,s:Phosphorylated S TMX1 32190 2 4 695.1 242.17 HUMAN 1 3.8733 -12.3687 RQRSRSGSSPEVDSK-p Q9UQ35;S1581-p RQRSRSGSSPEVDSK 0.256105749737423 0.00727421865613144 0.185333333333333 0.457666666666667 11.2374009519363 30.5880352852775 0.185333333333333 0.457666666666667 0.0752072839565637 0.000873366383242716 2.19775330974513 6.60231286561994 Q9UQ35 SRRM2 Q9UQ35.S1581.p_SRRM2 Q9UQ35_S1581sS1582s_2_2_1581_1582 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8893.8893.2 7.78 7.78 1.583 4 2 2 0 805.86 1450.779 S1581s S1582s TMT10 1579 (R) SGssPEVDSK (S) S(0.0)GS(0.99)S(0.99)PEVDS(0.0)K K:TMT10,s:Phosphorylated S SRRM2 300351.7 7 218 2.1 3310.34 HUMAN 1 11.2374 30.588 RQRSRSLSSSGTKHS-p Q9NZJ5;S1096-p RQRSRSLSSSGTKHS 0.0658837618616825 0.915668315902531 0.593333333333333 -0.016 25.4716605729777 0.537716789655014 0.593333333333334 -0.016 0.00283683412614353 0.883544282846398 5.16423436387423 -0.153514652003226 Q9NZJ5 EIF2AK3 Q9NZJ5.S1096.p_EIF2AK3 Q9NZJ5_S1096s _1_1_1096_1096 Q9NZJ5 Q9NZJ5|E7ER02 Eukaryotic translation initiation factor 2-alpha kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7719.7719.2 11.06 3.12 1.13 5 1 1 0 652.8465 1224.72 S1096s TMT10 1094 (R) SLsSSGTK (H) S(0.0)LS(0.99)S(0.0)S(0.0)GT(0.0)K K:TMT10,s:Phosphorylated S EIF2AK3 126241 1 11 1191.1 168.13 HUMAN 1 25.4717 -0.5377 RQRVRYDSSNQVKGK-p O95983;S85-p RQRVRYDSSNQVKGK 0.0158058455711388 0.000952253650599092 -1.054 -1.43066666666667 42.4747372967165 53.4070783418203 -1.054 -1.43066666666667 5.65621970338688e-05 4.5634381192018e-06 -11.3308097007052 -18.1784171797822 O95983 MBD3 O95983.S85.p_MBD3 O95983_S85s _1_1_85_85 O95983 O95983|O95983-2|K7EIE8|A0A0A0MTS6 Methyl-CpG-binding domain protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7649.7649.2 10.3 10.3 1.202 3 1 1 0 867.4529 1653.9324 S85s TMT10 81 (R) VRYDsSNQVK (G) VRY(0.0)DS(0.99)S(0.0)NQVK K:TMT10,s:Phosphorylated S MBD3 33071.7 9 3 2405.1 84.93 HUMAN 1 -42.4747 -53.4071 RQRYEILTPNSIPKG-p P35579;T725-p RQRYEILTPNSIPKG 0.473939665716417 0.0261269019940543 -0.113333333333333 0.301333333333333 5.97180945090116 21.5207277537508 -0.113333333333333 0.301333333333333 0.252824440551812 0.00704574992390329 -1.27954002614099 4.20885777565646 P35579 MYH9 P35579.T725.p_MYH9 P35579_T725t _1_1_725_725 P35579 P35579|P35579-2 Myosin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24730.24730.3 10.07 7.67 1.574 3 1 1 0 605.0042 1733.0249 T725t TMT10 721 (R) YEILtPNSIPK (G) Y(0.0)EILT(0.99)PNS(0.0)IPK K:TMT10,t:Phosphorylated T MYH9 227783.5 4 25 296.1 379.15 HUMAN 1 -5.9718 21.5207 RQSSLSCSPIGDSTQ-p Q2KHR3;S236-p RQSSLSCSPIGDSTQ 0.786969878882323 0.0131822884002457 0.042 -0.381666666666667 2.00875105748155 26.1802115980046 0.042 -0.381666666666667 0.629687242053436 0.00240978801555358 0.510739153573315 -5.34195223543365 Q2KHR3 QSER1 Q2KHR3.S236.p_QSER1 Q2KHR3_S236s_1_1_236_236 Q2KHR3 Q2KHR3 Glutamine and serine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16338.16338.3 17.44 17.44 1.244 7 1 1 0 973.1419 2836.4511 S236s N246n TMT10 230 (R) QSSLSCsPIGDSTQVSnGGLQQK (T) QS(0.0)S(0.0)LS(0.0)CS(0.99)PIGDS(0.0)T(0.0)QVS(0.0)N(1.0)GGLQQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated QSER1 190710.4 4 1 748.1 232.52 HUMAN 1 2.0088 -26.1802 RQSVIQFSPPFPGAQ-p Q9Y2G9;S1356-p RQSVIQFSPPFPGAQ 0.688287844973563 0.940609497059658 0.0746666666666667 -0.00999999999999997 3.04608680806849 0.379063730732369 0.0746666666666667 -0.00999999999999997 0.49589681527329 0.916418033861736 0.729757603121243 -0.109931444603917 Q9Y2G9 SBNO2 Q9Y2G9.S1356.p_SBNO2 Q9Y2G9_S1356s _1_1_1356_1356 Q9Y2G9 Q9Y2G9|K7ES28|Q9Y2G9-3 Protein strawberry notch homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.36009.36009.2 11.57 11.57 5.068 2 1 1 0 1047.0402 2013.1007 S1356s TMT10 1350 (R) QSVIQFsPPFPGAQAPL (-) QS(0.0)VIQFS(0.99)PPFPGAQAPL s:Phosphorylated S SBNO2 151641.7 2 1 6456.1 11.57 HUMAN 1 3.0461 -0.3791 RQSWRRASMKETNRR-p Q9H410;S100-p RQSWRRASMKETNRR 0.0908120109461902 0.0719370773476004 0.558333333333333 -0.213 22.1582074646849 15.1898879765894 0.558333333333333 -0.213 0.00608386058685778 0.030269915063531 4.35820136749873 -2.9122113533579 Q9H410 DSN1 Q9H410.S100.p_DSN1 Q9H410_S100s _1_1_100_100 Q9H410 Q9H410|Q9H410-4|Q9H410-2|Q5JW54 Kinetochore-associated protein DSN1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4062.4062.4 7.04 7.04 7.041 2 1 1 0 408.4677 1550.8837 S100s TMT10 98 (R) RAsMKETNR (R) RAS(0.99)MKET(0.0)NR K:TMT10,s:Phosphorylated S DSN1 40408.8 1 5 1406.1 145.92 HUMAN 1 22.1582 -15.1899 RQTHLRATPTKAPAP-p A0A0C4DFM2;T242-p RQTHLRATPTKAPAP 0.134264480831341 0.0039586533389266 -0.333333333333333 -0.570666666666667 17.8998178325246 35.4263897708108 -0.333333333333333 -0.570666666666667 0.0162187812660169 0.000286655991082953 -3.44201868939665 -8.25251439070154 A0A0C4DFM2 NotFound A0A0C4DFM2.T242.p_NotFound A0A0C4DFM2_T242t _1_1_242_242 A0A0C4DFM2 A0A0C4DFM2|Q6ZN55-2 HCG1643764, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26305.26305.4 22.52 21.79 1.846 3 1 1 0 755.1895 2937.7654 T242t TMT10 241 (R) AtPTKAPAPVVLGSPVVLGPPVGQAR (V) AT(0.99)PT(0.0)KAPAPVVLGS(0.0)PVVLGPPVGQAR K:TMT10,t:Phosphorylated T ZNF574 111041.3 7 1 1417.1 144.46 HUMAN 1 -17.8998 -35.4264 RQTRSSGSETEQVVD-p O95251;S102-p RQTRSSGSETEQVVD 0.973941639738379 0.0144161850125245 0.006 0.399333333333333 0.224846927426885 25.5256846958787 0.00599999999999999 0.399333333333334 0.949544466505918 0.002801763869012 0.0662673720219163 5.17152821781771 O95251 KAT7 O95251.S102.p_KAT7 O95251_S99sS100sS102s_3_3_99_102 O95251 O95251|O95251-4 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16206.16206.4 11.77 11.77 1.113 7 3 3 0 771.8389 2844.4376 S99s S100s S102s TMT10 96 (R) QTRssGsETEQVVDFSDRETK (N) QT(0.0)RS(0.99)S(0.99)GS(0.99)ET(0.0)EQVVDFS(0.0)DRET(0.0)K K:TMT10,s:Phosphorylated S KAT7 71325.8 4 19 691.1 243.06 HUMAN 1 0.2248 25.5257 RQTTFLGSPGPRHER-p Q9H0X9-3;S658-p RQTTFLGSPGPRHER 0.622172474425454 0.12892169630849 0.095 -0.204333333333333 3.83151967197787 11.7277067068966 0.095 -0.204333333333333 0.413854834470716 0.0671783494726624 0.884784289124372 -2.28301956853914 Q9H0X9 OSBPL5 Q9H0X9.3.S658.p_OSBPL5 Q9H0X9-3_S658s _1_1_658_658 Q9H0X9-3 Q9H0X9|Q9H0X9-2|Q9H0X9-3|E9PNH0 Isoform 3 of Oxysterol-binding protein-related protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7538.7538.3 14.75 10.82 1.281 3 1 1 0 631.3181 1811.9714 S658s TMT10 652 (R) QTTFLGsPGPRHER (S) QT(0.0)T(0.0)FLGS(0.99)PGPRHER s:Phosphorylated S OSBPL5 89402.9 5 5 2965.1 64.51 HUMAN 1 3.8315 -11.7277 RQVDGDNSHVEMKLA-p P02786;S34-p RQVDGDNSHVEMKLA 0.266942627760972 0.00781271525487499 -0.195333333333333 -0.593333333333333 10.8702236682388 30.0637324469746 -0.195333333333333 -0.593333333333333 0.0818422637043461 0.000985432213881118 -2.13338878315305 -6.44129932582779 P02786 TFRC P02786.S34.p_TFRC P02786_S34s _1_1_34_34 P02786 P02786|F8WBE5 Transferrin receptor protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8328.8328.2 14.75 14.75 99 1 1 1 0 948.9495 1816.9264 S34s TMT10 28 (R) QVDGDNsHVEMK (L) QVDGDNS(1.0)HVEMK K:TMT10,s:Phosphorylated S TFRC 85326.2 4 3 3387.1 52.22 HUMAN 1 -10.8702 -30.0637 RQVLDYPSPDVECAK-p Q9P270;S160-p RQVLDYPSPDVECAK 0.605388287873157 0.00226437279650065 -0.0823333333333334 -0.87 4.0280092766424 40.9250230551104 -0.0823333333333334 -0.87 0.395547890154141 8.08160638871019e-05 -0.92247982790865 -10.5553530782981 Q9P270 SLAIN2 Q9P270.S160.p_SLAIN2 Q9P270_S160s _1_1_160_160 Q9P270 Q9P270 SLAIN motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17458.17458.4 16.84 16.84 3.518 2 1 1 0 629.8336 2436.3412 S160s TMT10 154 (R) QVLDYPsPDVECAKK (S) QVLDY(0.0)PS(0.99)PDVECAKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLAIN2 62770.5 3 8 277.1 389.63 HUMAN 1 -4.028 -40.925 RQVTITGSAASISLA-p Q15365;S332-p RQVTITGSAASISLA 0.308816829804886 0.698016270980836 0.21 0.0693333333333334 9.53821882756523 2.14630176201161 0.21 0.0693333333333334 0.111218777544994 0.610056169914209 1.90158244266337 0.540898732982831 Q15365 PCBP1 Q15365.S332.p_PCBP1 Q15365_S332s _1_1_332_332 Q15365 Q15365 Poly(rC)-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.34234.34234.3 15.33 15.33 1.229 6 1 1 0 829.449 2406.3554 S332s TMT10 326 (R) QVTITGsAASISLAQYLINAR (L) QVT(0.0)IT(0.0)GS(0.99)AAS(0.0)IS(0.0)LAQY(0.0)LINAR s:Phosphorylated S PCBP1 38010.7 1 7 1412.1 145.32 HUMAN 1 9.5382 2.1463 RQYGLDNSGGYKQQQ-p Q96AP4;S272-p RQYGLDNSGGYKQQQ 0.0591308077305013 0.0128774434955101 -0.431666666666667 -0.370333333333333 26.8547876315915 26.3261650907041 -0.431666666666667 -0.370333333333333 0.00206310454989982 0.00233014791786916 -5.52940258939237 -5.38050237242793 Q96AP4 ZUFSP Q96AP4.S272.p_ZUFSP Q96AP4_S272s _1_1_272_272 Q96AP4 Q96AP4 Zinc finger with UFM1-specific peptidase domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13276.13276.3 8.9 8.9 4.279 3 1 1 0 580.6204 1659.8743 S272s TMT10 266 (R) QYGLDNsGGYK (Q) QY(0.0)GLDNS(0.99)GGY(0.0)K K:TMT10,s:Phosphorylated S ZUFSP 67212.8 1 1 6023.1 14.59 HUMAN 1 -26.8548 -26.3262 RQYGRGRSGGQVRDE-p P52298;S130-p RQYGRGRSGGQVRDE 0.759306370961676 0.0189342040006697 0.05 -0.346333333333333 2.29158774273289 23.6960865989995 0.05 -0.346333333333333 0.589985347243982 0.00426964080232561 0.572449917252689 -4.7154472639387 P52298 NCBP2 P52298.S130.p_NCBP2 P52298_S130s _1_1_130_130 P52298 P52298 Nuclear cap-binding protein subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4228.4228.3 17.99 14.38 16.694 3 1 1 0 684.625 1971.8904 S130s Hydrogen 130 (R) sGGQVRDEYRQDYDAGR (G) S(0.99)GGQVRDEY(0.0)RQDY(0.0)DAGR s:Phosphorylated S NCBP2 18171.9 2 2 4186.1 35.73 HUMAN 1 2.2916 -23.6961 RQYKEDESQSEEEND-p Q8NHQ1;S238-p RQYKEDESQSEEEND 0.948413989552235 0.352484569652781 -0.016 0.138666666666667 0.456947445559288 6.00320196032137 -0.016 0.138666666666667 0.900130039607362 0.251003515390934 -0.131500981229513 1.28482817024188 Q8NHQ1 CEP70 Q8NHQ1.S238.p_CEP70 Q8NHQ1_S238sS240s_2_2_238_240 Q8NHQ1 Q8NHQ1 Centrosomal protein of 70 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15015.15015.4 10.38 10.38 10.383 7 2 2 0 972.189 3725.8022 S238s S240s TMT10 232 (R) QYKEDEsQsEEENDYRNLDASPTYK (G) QY(0.0)KEDES(0.99)QS(0.99)EEENDY(0.0)RNLDAS(0.0)PT(0.0)Y(0.0)K K:TMT10,s:Phosphorylated S CEP70 70321.1 1 2 5627.1 17.62 HUMAN 1 -0.4569 6.0032 RRAAKLQSSQEPEAP-p Q9UNF1;S264-p RRAAKLQSSQEPEAP 0.595527418368709 0.744777232011421 0.0793333333333333 0.0326666666666667 4.15360367030835 1.76594162004976 0.0793333333333333 0.0326666666666667 0.384272789474183 0.665895128908126 0.946379538699442 0.456269980104351 Q9UNF1 MAGED2 Q9UNF1.S264.p_MAGED2 Q9UNF1_S264s _1_1_264_264 Q9UNF1 Q9UNF1|Q9UNF1-2|Q5H909|Q5H907 Melanoma-associated antigen D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17454.17454.3 13.77 6.51 1.158 2 1 1 0 866.4471 2517.3623 S264s TMT10 262 (K) LQsSQEPEAPPPRDVALLQGR (A) LQS(0.99)S(0.0)QEPEAPPPRDVALLQGR s:Phosphorylated S MAGED2 65124.3 5 12 893.1 204.33 HUMAN 1 4.1536 1.7659 RRAGNALTPELAPVQ-p P0C1Z6;T207-p RRAGNALTPELAPVQ 0.460948870369204 0.0657093201936484 -0.103 0.243666666666667 6.20122929142524 15.7316970998088 -0.103 0.243666666666667 0.239815401390902 0.0267196207754022 -1.32033280101282 3.01475508558333 P0C1Z6 TFPT P0C1Z6.T207.p_TFPT P0C1Z6_T207t _1_1_207_207 P0C1Z6 P0C1Z6|P0C1Z6-2 TCF3 fusion partner HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24220.24220.3 16.45 16.45 99 1 1 1 0 687.3908 1980.1894 T207t TMT10 202 (R) AGNALtPELAPVQIK (V) AGNALT(1.0)PELAPVQIK K:TMT10,t:Phosphorylated T TFPT 28334.9 4 4 969.1 193.6 HUMAN 1 -6.2012 15.7317 RRAKLGLSPGEPSPV-p A0A0G2JHC2;S54-p RRAKLGLSPGEPSPV 0.436796315220559 0.601826364077864 0.108666666666667 -0.0813333333333333 6.62380518483548 2.99020167599947 0.108666666666667 -0.0813333333333333 0.21758025505598 0.502319262472248 1.39498789791929 -0.71832081537515 A0A0G2JHC2 NotFound A0A0G2JHC2.S54.p_NotFound A0A0G2JHC2_S54s _1_1_54_54 A0A0G2JHC2 Q6NYC8|A0A0G2JHC2|Q6NYC8-2 PPP1R18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.34893.34893.5 19.22 19.22 1.611 4 1 1 0 845.6351 4144.1764 S54s TMT10 51 (K) LGLsPGEPSPVLGTVEAGPPDPDESAVLLEAIGPVHQNR (F) LGLS(0.99)PGEPS(0.0)PVLGT(0.0)VEAGPPDPDES(0.0)AVLLEAIGPVHQNR s:Phosphorylated S PPP1R18 68325.8 1 1 1213.1 166.15 HUMAN 1 6.6238 -2.9902 RRAKQVVSVVQDEEV-p Q96TA1;S624-p RRAKQVVSVVQDEEV 0.553785383781856 0.331555744370979 -0.0976666666666667 0.106333333333333 4.73854523770939 6.35206050302075 -0.0976666666666667 0.106333333333333 0.335850095578392 0.231629542667428 -1.0559197670916 1.34670846917271 Q96TA1 FAM129B Q96TA1.S624.p_FAM129B Q96TA1_S624sS646s_2_2_624_646 Q96TA1 Q96TA1|Q96TA1-2 Niban-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.33739.33739.4 16.83 16.83 1.615 5 2 2 0 988.4644 3790.9224 S624s S646s TMT10 621 (K) QVVsVVQDEEVGLPFEASPESPPPAsPDGVTEIR (G) QVVS(0.99)VVQDEEVGLPFEAS(0.0)PES(0.0)PPPAS(0.99)PDGVT(0.0)EIR s:Phosphorylated S FAM129B 84649.8 7 12 1146.1 172.91 HUMAN 1 -4.7385 6.3521 RRALINLSPPSMVVQ-p Q9H5V7;S200-p RRALINLSPPSMVVQ 0.845613661542749 0.257425557659873 0.0276666666666666 0.117666666666667 1.40784965355425 7.76480209678862 0.0276666666666667 0.117666666666667 0.72312776125021 0.167309187561532 0.373270484658882 1.59384204367253 Q9H5V7 IKZF5 Q9H5V7.S200.p_IKZF5 Q9H5V7_S200s _1_1_200_200 Q9H5V7 Q9H5V7 Zinc finger protein Pegasus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34139.34139.4 15.09 15.09 1.251 8 1 1 0 1269.1447 4993.5934 S200s TMT10 195 (R) ALINLsPPSMVVQKPDYLNDFTHEIPNIQTDSYESMAK (T) ALINLS(0.99)PPS(0.0)MVVQKPDY(0.0)LNDFT(0.0)HEIPNIQT(0.0)DS(0.0)Y(0.0)ES(0.0)MAK K:TMT10,s:Phosphorylated S IKZF5 47422.2 3 143 240.61 415.72 HUMAN 1 1.4078 7.7648 RRALSSDSILSPAPD-p Q8IVT2;S397-p RRALSSDSILSPAPD 0.201344466647756 0.0529355983987602 -0.206333333333333 -0.232 13.5178241953516 17.0216668753461 -0.206333333333333 -0.232 0.0444854082448252 0.0198533277610232 -2.60480816937408 -3.26441208667796 Q8IVT2 MISP Q8IVT2.S397.p_MISP Q8IVT2_S397s _1_1_397_397 Q8IVT2 Q8IVT2 Mitotic interactor and substrate of PLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18259.18259.3 17.14 15.41 1.207 4 1 1 0 603.6379 1728.9329 S397s TMT10 392 (R) ALSSDsILSPAPDAR (A) ALS(0.0)S(0.0)DS(0.99)ILS(0.0)PAPDAR s:Phosphorylated S MISP 75526.3 2 11 490.1 294.31 HUMAN 1 -13.5178 -17.0217 RRAPISHSLRRSRFS-p Q9BY89;S1662-p RRAPISHSLRRSRFS 0.814772258094084 0.402510904170218 -0.0776666666666667 0.235 1.70747865439967 5.25757687674279 -0.0776666666666667 0.235 0.674919746249956 0.298017874072677 -0.443000353041312 1.15081495504025 Q9BY89 KIAA1671 Q9BY89.S1662.p_KIAA1671 Q9BY89_S1662s _1_1_1662_1662 Q9BY89 Q9BY89|A0A1B0GVJ7|Q9BY89-2 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4602.4602.3 10.68 9.42 1.723 2 1 1 0 449.2485 1265.764 S1662s TMT10 1657 (R) APISHsLRR (S) APIS(0.0)HS(0.99)LRR s:Phosphorylated S KIAA1671 197734.4 2 23 105.1 590.35 HUMAN 1 -1.7075 5.2576 RRAQRPNSLDLSATN-p Q13873;S940-p RRAQRPNSLDLSATN 0.468579597242891 0.547740166870021 0.098 -0.0576666666666666 6.07847357332319 3.51552020925346 0.098 -0.0576666666666666 0.24669062351519 0.445090145668838 1.2985309568075 -0.823181360242215 Q13873 BMPR2 Q13873.S940.p_BMPR2 Q13873_S940s _1_1_940_940 Q13873 Q13873 Bone morphogenetic protein receptor type-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23181.23181.3 19.18 19.18 1.639 7 1 1 0 1137.5601 3330.6975 S940s Hydrogen 935 (R) AQRPNsLDLSATNVLDGSSIQIGESTQDGK (S) AQRPNS(0.99)LDLS(0.0)AT(0.0)NVLDGS(0.0)S(0.0)IQIGES(0.0)T(0.0)QDGK K:TMT10-Lys-Only,s:Phosphorylated S BMPR2 116511.6 3 5 2108.1 97.4 HUMAN 1 6.0785 -3.5155 RRARIKHSEGGDIPP-p Q8N5Y8-3;S245-p RRARIKHSEGGDIPP 0.535600087803484 0.653768558186368 -0.0953333333333334 -0.043 5.01974558254411 2.52182953429714 -0.0953333333333334 -0.043 0.314793272021492 0.559521844400627 -1.10767536922133 -0.621417303668365 Q8N5Y8 PARP16 Q8N5Y8.3.S245.p_PARP16 Q8N5Y8-3_S245s _1_1_245_245 Q8N5Y8-3 Q8N5Y8-3|Q8N5Y8-2 Isoform 3 of Mono [ADP-ribose] polymerase PARP16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9418.9418.4 8.31 0.57 99 1 1 1 0 512.0406 1965.1736 S245s TMT10 242 (R) IKHsEGGDIPPK (Y) IKHS(1.0)EGGDIPPK K:TMT10,s:Phosphorylated S PARP16 36811.5 1 1 6989.1 8.31 HUMAN 1 -5.0197 -2.5218 RRARRNNSGEAGGAA-p A0A0C4DFM2;S388-p RRARRNNSGEAGGAA 0.867635849079879 0.183970635400432 -0.0283333333333333 -0.173 1.20154591258167 9.66793202671943 -0.0283333333333333 -0.173 0.758307600167627 0.107946060495029 -0.323697064657419 -1.92332332029721 A0A0C4DFM2 NotFound A0A0C4DFM2.S388.p_NotFound A0A0C4DFM2_S388s _1_1_388_388 A0A0C4DFM2 A0A0C4DFM2|Q6ZN55-2 HCG1643764, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27401.27401.4 34.72 34.72 12.808 4 1 1 0 1024.2289 4013.9184 S388s TMT10 386 (R) NNsGEAGGAATQELFCSACDQLFLSPHQLQQHLR (S) NNS(0.99)GEAGGAAT(0.0)QELFCS(0.0)ACDQLFLS(0.0)PHQLQQHLR C:Carbamidomethylation,s:Phosphorylated S ZNF574 111041.3 3 3 1417.1 144.46 HUMAN 1 -1.2015 -9.6679 RRASVRGSSEEDEDA-p Q8NC56;S138-p RRASVRGSSEEDEDA 0.473025507918826 0.16552827983193 0.121333333333333 0.165333333333333 5.99081115812056 10.2717650296613 0.121333333333333 0.165333333333333 0.251720672989505 0.0939341472299385 1.28292648460183 2.02812200506054 Q8NC56 LEMD2 Q8NC56.S138.p_LEMD2 Q8NC56_S138sS139s_2_2_138_139 Q8NC56 Q8NC56 LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4726.4726.4 12.11 8.37 2.121 4 2 2 0 592.2525 2206.0533 S138s S139s TMT10 133 (R) ASVRGssEEDEDARTPDR (A) AS(0.0)VRGS(0.99)S(0.99)EEDEDART(0.0)PDR s:Phosphorylated S LEMD2 57373.5 12 11 664.1 250.64 HUMAN 2 5.9908 10.2718 RRATGDGSSPELPSL-p Q9H2Y7;S1025-p RRATGDGSSPELPSL 0.413312492292849 0.00611045881424865 -0.11 -0.531666666666667 7.07622150935024 31.9154135502918 -0.11 -0.531666666666667 0.196054966799187 0.000643366798453913 -1.47434890041977 -7.02465298843325 Q9H2Y7 ZNF106 Q9H2Y7.S1025.p_ZNF106 Q9H2Y7_S1025sS1026s_2_2_1025_1026 Q9H2Y7 Q9H2Y7|Q9H2Y7-2|A0A0C4DGM5 Zinc finger protein 106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18659.18659.3 11.26 11.26 11.261 4 2 2 0 635.6143 1744.8915 S1025s S1026s TMT10 1020 (R) ATGDGssPELPSLER (K) AT(0.0)GDGS(0.99)S(0.99)PELPS(0.0)LER s:Phosphorylated S ZNF106 210818.9 6 17 170.1 490.3 HUMAN 1 -7.0762 -31.9154 RRATRPRSGCCDDSA-p Q9P1Y5;S1020-p RRATRPRSGCCDDSA 0.959344047178047 0.752627238822166 -0.0116666666666667 0.148333333333333 0.348621690453167 1.70507008798502 -0.0116666666666667 0.148333333333333 0.922864267810249 0.675294155770357 -0.101426440877014 0.442400965440463 Q9P1Y5 CAMSAP3 Q9P1Y5.S1020.p_CAMSAP3 Q9P1Y5_S1020s _1_1_1020_1020 Q9P1Y5 Q9P1Y5-2 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6918.6918.2 12.4 7.7 3.514 2 1 1 0 760.8079 1440.6409 S1020s TMT10 1020 (R) sGCCDDSALAR (S) S(0.99)GCCDDS(0.0)ALAR C:Carbamidomethylation,s:Phosphorylated S CAMSAP3 135546 1 21 217.1 432.4 HUMAN 1 -0.3486 1.7051 RRCLVPASPEQHVEV-p P98171-2;S900-p RRCLVPASPEQHVEV 0.625103302677489 0.0551829830092749 -0.07 -0.246666666666667 3.78860491682481 16.7651383067107 -0.07 -0.246666666666667 0.417964607760113 0.0210613482532798 -0.876499255054196 -3.21411187819839 P98171 ARHGAP4 P98171.2.S900.p_ARHGAP4 P98171-2_S900s _1_1_900_900 P98171-2 P98171-2|E7EQN5|E9PCM6 Isoform 2 of Rho GTPase-activating protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15966.15966.3 17.93 17.93 99 1 1 1 0 749.3825 2166.1629 S900s TMT10 895 (R) CLVPAsPEQHVEVDK (A) CLVPAS(1.0)PEQHVEVDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARHGAP4 110417.7 2 2 1843.1 111.4 HUMAN 1 -3.7886 -16.7651 RRCQVAFSYLPQNDD-p Q96B97;S108-p RRCQVAFSYLPQNDD 0.0520154613962689 0.750193167117678 -0.539666666666667 -0.031 27.9596946014155 1.72538735450205 -0.539666666666667 -0.031 0.00159967051448644 0.672142356938553 -5.83458738198398 -0.447040723592338 Q96B97 SH3KBP1 Q96B97.S108.p_SH3KBP1 Q96B97_S108s _1_1_108_108 Q96B97 Q96B97|Q96B97-2 SH3 domain-containing kinase-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27297.27297.3 17.71 17.71 3.898 2 1 1 0 903.1101 2627.3427 S108s TMT10 103 (R) CQVAFsYLPQNDDELELK (V) CQVAFS(0.99)Y(0.0)LPQNDDELELK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SH3KBP1 73296.1 1 1 2944.1 65.24 HUMAN 1 -27.9597 -1.7254 RRCRKRQSPEPSPVT-p Q9NRL2;S1413-p RRCRKRQSPEPSPVT 0.901524480760981 0.0352706764539189 -0.0186666666666667 -0.262 0.883531296138747 19.5549001687093 -0.0186666666666667 -0.261843221207881 0.815918669130798 0.0110792403293595 -0.244402788680738 -3.78063395716107 Q9NRL2 BAZ1A Q9NRL2.S1413.p_BAZ1A Q9NRL2_S1413s _1_1_1413_1413 Q9NRL2 Q9NRL2|Q9NRL2-2 Bromodomain adjacent to zinc finger domain protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8793.8793.3 14.67 14.67 3.247 3 1 1 0 578.3027 1652.9281 S1413s TMT10 1411 (K) RQsPEPSPVTLGR (R) RQS(0.99)PEPS(0.0)PVT(0.0)LGR s:Phosphorylated S BAZ1A 180353.8 13 11 567.1 270.71 HUMAN 1 -0.8835 -19.5549 RRDLRIKSQELEVKN-p Q14204;S3226-p RRDLRIKSQELEVKN 0.9421991389452 0.357108983053956 0.0153333333333333 0.122 0.508835006737647 5.93164627274273 0.0153333333333333 0.122 0.889439677708108 0.255173383787774 0.145689737785176 1.27207796015239 Q14204 DYNC1H1 Q14204.S3226.p_DYNC1H1 Q14204_S3226s _1_1_3226_3226 Q14204 Q14204 Cytoplasmic dynein 1 heavy chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15113.15113.3 11.67 11.67 99 1 1 1 0 614.363 1761.1089 S3226s TMT10 3224 (R) IKsQELEVK (N) IKS(1.0)QELEVK K:TMT10,s:Phosphorylated S DYNC1H1 535136.6 1 7 1294.1 156.82 HUMAN 1 0.5088 5.9316 RRDMQPLSPISVHER-p P28749;S640-p RRDMQPLSPISVHER 0.491254403752362 0.00356137322963082 -0.101 -1.023 5.6848163498064 36.4953579517461 -0.101 -1.023 0.270096132151469 0.000224111532222798 -1.22820605978345 -8.66135013893618 P28749 RBL1 P28749.S640.p_RBL1 P28749_S640s _1_1_640_640 P28749 P28749|P28749-2 Retinoblastoma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14911.14911.2 15.12 15.12 2.818 2 1 1 0 909.4454 1737.9155 S640s TMT10 635 (R) DMQPLsPISVHER (Y) DMQPLS(0.99)PIS(0.0)VHER s:Phosphorylated S RBL1 122214.1 3 5 566.1 270.71 HUMAN 1 -5.6848 -36.4954 RRDPFRDSPLSSRLL-p Q9UJY1;S24-p RRDPFRDSPLSSRLL 0.0866557243462627 0.853499596224303 0.331 -0.035 22.7012245873462 0.968868587530251 0.331 -0.035 0.00536880389972012 0.80004265285098 4.4841501605802 -0.266025013425295 Q9UJY1 HSPB8 Q9UJY1.S24.p_HSPB8 Q9UJY1_S24s _1_1_24_24 Q9UJY1 Q9UJY1 Heat shock protein beta-8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8088.8088.3 8.67 8.67 1.52 3 1 1 0 581.2918 1661.8921 S24s TMT10 18 (R) RDPFRDsPLSSR (L) RDPFRDS(0.99)PLS(0.0)S(0.0)R s:Phosphorylated S HSPB8 21775.1 2 1 3869.1 41.52 HUMAN 1 22.7012 -0.9689 RRDQMEGSPNSSESF-p Q9Y520-7;S781-p RRDQMEGSPNSSESF 0.615350842498504 0.925799558676314 0.116 -0.0156666666666666 3.91305327033579 0.47291721406953 0.116 -0.0156666666666666 0.406157683069455 0.896826182001272 0.900472776271057 -0.135869889267552 Q9Y520 PRRC2C Q9Y520.7.S781.p_PRRC2C Q9Y520-7_S781s _1_1_781_781 Q9Y520-7 Q9Y520-7|Q9Y520-5|E7EPN9|Q9Y520-4|Q9Y520-6|Q9Y520-3 Isoform 7 of Protein PRRC2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12490.12490.3 15.58 15.58 2.531 4 1 1 0 777.3367 2250.0294 S781s TMT10 776 (R) DQMEGsPNSSESFEHIAR (S) DQMEGS(0.99)PNS(0.0)S(0.0)ES(0.0)FEHIAR s:Phosphorylated S PRRC2C 317703.2 1 99 36.3 882.05 HUMAN 1 3.9131 -0.4729 RRDRDGYSYGSRSGG-p Q13247;S81-p RRDRDGYSYGSRSGG 0.129751256844141 0.168262334196269 -0.316666666666667 0.274333333333333 18.3641339270468 10.1805992243112 -0.316666666666667 0.274333333333333 0.0145742631668085 0.0959268265909811 -3.53633746783327 2.01227455240724 Q13247 SRSF6 Q13247.S81.p_SRSF6 Q13247_S81s _1_1_81_81 Q13247 Q13247|Q13247-3|Q13247-2 Serine/arginine-rich splicing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4924.4924.3 12.34 12.34 1.25 4 1 1 0 495.5507 1404.6705 S81s TMT10 76 (R) DRDGYsYGSR (S) DRDGY(0.0)S(0.99)Y(0.0)GS(0.0)R s:Phosphorylated S SRSF6 39700.2 1 16 743.1 233.79 HUMAN 1 -18.3641 10.1806 RRDRDNDSDDVESNL-p Q9NZM1;S340-p RRDRDNDSDDVESNL 0.55149957194832 0.235262802342653 0.085 0.129 4.76949232856807 8.2768184311649 0.085 0.129 0.333465391144351 0.148702461275135 1.06164194246663 1.68259736154504 Q9NZM1 MYOF Q9NZM1.S340.p_MYOF Q9NZM1_S340s _1_1_340_340 Q9NZM1 Q9NZM1|Q9NZM1-3|Q9NZM1-6|Q9NZM1-2|Q9NZM1-5 Myoferlin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27265.27265.3 19.93 19.93 3.393 2 1 1 0 903.1124 2627.3474 S340s TMT10 335 (R) DRDNDsDDVESNLLLPAGIALR (W) DRDNDS(0.99)DDVES(0.0)NLLLPAGIALR s:Phosphorylated S MYOF 236244.8 1 4 829.1 216.58 HUMAN 1 4.7695 8.2768 RRDYDDMSPRRGPPP-p P61978-2;S284-p RRDYDDMSPRRGPPP 0.693334723869984 0.474778658086438 0.057 0.067 2.98449922419134 4.31405403607836 0.057 0.067 0.502979259984575 0.370334861563698 0.717262154557923 0.976530076793491 P61978 HNRNPK P61978.2.S284.p_HNRNPK P61978-2_S284s _1_1_284_284 P61978-2 P61978-2 Isoform 2 of Heterogeneous nuclear ribonucleoprotein K HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6131.6131.3 11.58 6.74 6.449 2 1 1 0 488.5445 1383.6524 S284s TMT10 279 (R) DYDDMsPRR (G) DY(0.0)DDMS(0.99)PRR s:Phosphorylated S HNRNPK 51312.6 27 7 595.1 264.01 HUMAN 1 2.9845 4.3141 RREARAFSEGEQEKC-p Q7Z333-4;S2668-p RREARAFSEGEQEKC 0.91140351910678 0.492337150426793 0.0183333333333333 -0.0696666666666667 0.791108059987541 4.11391307596471 0.0183333333333333 -0.0696666666666667 0.833468506133893 0.387800792630901 0.220626788245815 -0.938680171907011 Q7Z333 SETX Q7Z333.4.S2668.p_SETX Q7Z333-4_S2668s _1_1_2668_2668 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10789.10789.2 12.49 12.49 99 1 1 1 0 781.8784 1482.784 S2668s TMT10 2666 (R) AFsEGEQEK (C) AFS(1.0)EGEQEK K:TMT10,s:Phosphorylated S SETX 310728.6 1 19 192.1 463.82 HUMAN 1 0.7911 -4.1139 RREEAEESGPQLAPL-p Q9BUP0;S22-p RREEAEESGPQLAPL 0.109209229853993 0.454960520576408 0.330333333333333 0.0846666666666667 20.1415096742445 4.55919036540866 0.330333333333333 0.0846666666666667 0.00967941326518829 0.350010411726475 3.90938589374885 1.02242859993482 Q9BUP0 EFHD1 Q9BUP0.S22.p_EFHD1 Q9BUP0_S22s _1_1_22_22 Q9BUP0 Q9BUP0 EF-hand domain-containing protein D1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19419.19419.5 22.52 14.76 21.035 5 1 1 0 1051.535 5173.6806 S22s TMT10 16 (R) REEAEEsGPQLAPLGAPAPEPKPEPEPPARAPTASADAELSAQLSR (R) REEAEES(0.99)GPQLAPLGAPAPEPKPEPEPPARAPT(0.0)AS(0.0)ADAELS(0.0)AQLS(0.0)R K:TMT10,s:Phosphorylated S EFHD1 27041.3 1 2 3915.1 40.8 HUMAN 1 20.1415 4.5592 RREEGDPSPHSGGVC-p O75376-2;S2212-p RREEGDPSPHSGGVC 0.39901938589383 0.472071556219389 0.136333333333333 0.119666666666667 7.36152836547372 4.34538032339988 0.136333333333333 0.119666666666667 0.183589214403687 0.367673193834361 1.52416014904174 0.982422876506812 O75376 NCOR1 O75376.2.S2212.p_NCOR1 O75376-2_S2212s _1_1_2212_2212 O75376-2 O75376|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5076.5076.5 14.34 8.68 3.766 2 1 1 0 521.6703 2524.3545 S2212s TMT10 2206 (R) REEGDPsPHSGGVCKPK (L) REEGDPS(0.99)PHS(0.0)GGVCKPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NCOR1 259453.1 5 32 35.1 889.74 HUMAN 1 7.3615 4.3454 RREERSLSAPGNLLT-p Q96RR4-3;S511-p RREERSLSAPGNLLT 0.558689256078238 0.00807983777316582 -0.086 0.540333333333333 4.6680479683006 29.8085204618131 -0.086 0.540333333333333 0.341346302721237 0.00104507619122724 -1.04285918016753 6.36407359614597 Q96RR4 CAMKK2 Q96RR4.3.S511.p_CAMKK2 Q96RR4-3_S511s _1_1_511_511 Q96RR4-3 Q96RR4|Q96RR4-7|Q96RR4-4|Q96RR4-3|Q96RR4-2|Q96RR4-5 Isoform 3 of Calcium/calmodulin-dependent protein kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22542.22542.2 14 14 3.238 3 1 1 0 819.9648 1558.9569 S511s TMT10 509 (R) SLsAPGNLLTK (Q) S(0.0)LS(0.99)APGNLLT(0.0)K K:TMT10,s:Phosphorylated S CAMKK2 60285.4 4 12 1793.1 114.32 HUMAN 1 -4.668 29.8085 RREERSMSAPGNLLV-p J3KPJ3;S502-p RREERSMSAPGNLLV 0.141034174122955 0.010646171406777 -0.26 0.64 17.3912430235888 27.6616807116904 -0.26 0.64 0.0182337374750342 0.0017132941375008 -3.34009518394276 5.74286788992064 J3KPJ3 NotFound J3KPJ3.S502.p_NotFound J3KPJ3_S502s _1_1_502_502 J3KPJ3 J3KPJ3|Q8N5S9 Calcium/calmodulin-dependent protein kinase kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22504.22504.3 11.55 8.53 2.125 2 1 1 0 552.3053 1574.934 S502s TMT10 500 (R) SMsAPGNLLVK (E) S(0.0)MS(0.99)APGNLLVK K:TMT10,s:Phosphorylated S CAMKK1 59428.6 1 4 1793.3 114.32 HUMAN 1 -17.3912 27.6617 RREHFSFSPRMPVGD-p F8VU39;S611-p RREHFSFSPRMPVGD 0.664065722849874 0.411595957047796 0.0626666666666666 -0.137 3.32649591852296 5.12878124227846 0.0626666666666667 -0.137 0.464890218093637 0.30698833668528 0.785981787820287 -1.1273735427754 F8VU39 BAZ2A F8VU39.S611.p_BAZ2A F8VU39_S611s _1_1_611_611 F8VU39 F8VU39|Q9UIF9-3|Q9UIF9-2|J3KPG5 Bromodomain adjacent to zinc finger domain protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11560.11560.3 7.23 7.23 1.147 2 1 1 0 439.2063 1235.637 S611s TMT10 606 (R) EHFSFsPR (M) EHFS(0.0)FS(0.99)PR s:Phosphorylated S BAZ2A 212873.4 1 7 471.1 302.34 HUMAN 1 3.3265 -5.1288 RREHSPDSDAYNSGD-p Q5T200;S848-p RREHSPDSDAYNSGD 0.9215282521125 0.214331342452024 0.0153333333333333 0.178 0.696740444059558 8.80210714288719 0.0153333333333333 0.178 0.851777091551888 0.131761729189783 0.195977744304595 1.77348465794277 Q5T200 ZC3H13 Q5T200.S848.p_ZC3H13 Q5T200_S845sS848sS853s_3_3_845_853 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5221.5221.4 15.06 15.06 2.817 4 3 3 0 716.2928 2622.2432 S845s S848s S853s Hydrogen 842 (R) REHsPDsDAYNsGDDKNEK (H) REHS(0.99)PDS(0.99)DAY(0.0)NS(0.99)GDDKNEK K:TMT10-Lys-Only,s:Phosphorylated S ZC3H13 197316.7 14 48 24.1 987.82 HUMAN 1 0.6967 8.8021 RREKVIETPENDFKH-p Q9H0G5;T275-p RREKVIETPENDFKH 0.112544694105773 0.00319184557443355 0.411333333333333 -0.621666666666667 19.7967369217249 37.4539602935295 0.411333333333333 -0.621666666666666 0.0104791560533869 0.000179723128811377 3.83546308264991 -9.04308874854082 Q9H0G5 NSRP1 Q9H0G5.T275.p_NSRP1 Q9H0G5_T275t _1_1_275_275 Q9H0G5 Q9H0G5|A0A024QZ33 Nuclear speckle splicing regulatory protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15681.15681.3 18.09 10.82 99 1 1 1 0 739.4001 2136.2155 T275t TMT10 270 (R) EKVIEtPENDFK (H) EKVIET(1.0)PENDFK K:TMT10,t:Phosphorylated T NSRP1 66617.1 7 3 900.1 203.68 HUMAN 1 19.7967 -37.454 RRELDRYSLDSEDLY-p Q9UPX8-3;S960-p RRELDRYSLDSEDLY 0.428805292254878 0.486589563508319 0.158 0.068 6.77015973509507 4.17939119823997 0.158 0.068 0.210370106345082 0.381997816222936 1.42071782135188 0.951102349347565 Q9UPX8 SHANK2 Q9UPX8.3.S960.p_SHANK2 Q9UPX8-3_S960s _1_1_960_960 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6|Q9UPX8-4|E7EUA2 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17305.17305.2 17.62 17.62 1.647 5 1 1 0 1085.4983 2090.0239 S960s TMT10 955 (R) ELDRYsLDSEDLYSR (N) ELDRY(0.0)S(0.99)LDS(0.0)EDLY(0.0)S(0.0)R s:Phosphorylated S SHANK2 202341.2 4 12 86.1 628.23 HUMAN 1 6.7702 4.1794 RRELEVRSPRQNKYS-p Q5QPK2;S21-p RRELEVRSPRQNKYS 0.207892104417555 0.328751203387295 -0.324333333333333 -0.137 13.1608429199981 6.3973065988291 -0.324333333333333 -0.137 0.0482965054495345 0.229228884037017 -2.54009075929829 -1.35470260714204 Q5QPK2 DPM1 Q5QPK2.S21.p_DPM1 Q5QPK2_S21s _1_1_21_21 Q5QPK2 Q5QPK2|O60762 Dolichol-phosphate mannosyltransferase subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7130.7130.3 9.53 4.97 99 1 1 1 0 432.2289 1214.7055 S21s TMT10 16 (R) ELEVRsPR (Q) ELEVRS(1.0)PR s:Phosphorylated S DPM1 32597 1 2 4214.1 35.29 HUMAN 1 -13.1608 -6.3973 RRELRAPSPPVEHPR-p Q86WR7;S179-p RRELRAPSPPVEHPR 0.324195658268258 0.654976908619292 0.147666666666667 -0.05 9.16248493382592 2.51190972819972 0.147666666666667 -0.05 0.121269477566622 0.560801319985572 1.83649354260478 -0.619324943737457 Q86WR7 PROSER2 Q86WR7.S179.p_PROSER2 Q86WR7_S179s _1_1_179_179 Q86WR7 Q86WR7|Q86WR7-2 Proline and serine-rich protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9363.9564.4 17.19 17.19 99 1 1 1 0 449.2369 1713.9598 S179s TMT10 174 (R) ELRAPsPPVEHPR (L) ELRAPS(1.0)PPVEHPR s:Phosphorylated S PROSER2 46143.5 11 4 734.1 235.52 HUMAN 1 9.1625 -2.5119 RREPKRKSLTFTGGA-p Q8NHQ8;S129-p RREPKRKSLTFTGGA 0.232360077075551 0.0464137390734325 -0.317 -0.420333333333333 12.1887174850141 17.8370052274224 -0.317 -0.420333333333333 0.060412700777653 0.0164550602674506 -2.36585319056408 -3.42657983902916 Q8NHQ8 RASSF8 Q8NHQ8.S129.p_RASSF8 Q8NHQ8_S129s _1_1_129_129 Q8NHQ8 Q8NHQ8|Q8NHQ8-2 Ras association domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17159.17159.2 11.59 11.59 3.289 3 1 1 0 710.3869 1339.7986 S129s TMT10 129 (K) sLTFTGGAK (G) S(0.99)LT(0.0)FT(0.0)GGAK K:TMT10,s:Phosphorylated S RASSF8 48554.3 3 1 6370.1 12.03 HUMAN 1 -12.1887 -17.837 RRERGRPSLYVQRDI-p Q8IVT2;S348-p RRERGRPSLYVQRDI 0.066791213713894 0.170111781453783 -0.440666666666667 -0.182 25.3412754069443 10.1142790529528 -0.440666666666667 -0.182 0.00292329375844269 0.0974029464883174 -5.13073388516586 -2.0007522917913 Q8IVT2 MISP Q8IVT2.S348.p_MISP Q8IVT2_S348s _1_1_348_348 Q8IVT2 Q8IVT2 Mitotic interactor and substrate of PLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7784.7784.3 9.03 9.03 9.03 2 1 1 0 462.2484 1304.7636 S348s TMT10 345 (R) GRPsLYVQR (D) GRPS(0.99)LY(0.0)VQR s:Phosphorylated S MISP 75526.3 1 8 490.1 294.31 HUMAN 1 -25.3413 -10.1143 RRESNRLSAPSYLAR-p Q9H4B6;S94-p RRESNRLSAPSYLAR 0.640615783875993 0.508560790420655 0.094 0.0893333333333333 3.61244127786613 3.93632397672801 0.094 0.0893333333333333 0.435267130367211 0.403987197450974 0.842282416086321 0.904786695958674 Q9H4B6 SAV1 Q9H4B6.S94.p_SAV1 Q9H4B6_S94s _1_1_94_94 Q9H4B6 Q9H4B6 Protein salvador homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11972.11972.3 11.18 11.18 2.439 4 1 1 0 591.6359 1692.923 S94s TMT10 89 (R) ESNRLsAPSYLAR (S) ES(0.0)NRLS(0.99)APS(0.0)Y(0.0)LAR s:Phosphorylated S SAV1 44747.2 3 1 2825.1 69.19 HUMAN 1 3.6124 3.9363 RRESRQESDPEDDDV-p Q9H307;S100-p RRESRQESDPEDDDV 0.451823780329444 0.646809183668774 0.104 0.0536666666666667 6.36781587343604 2.57980560533192 0.104 0.0536666666666667 0.230790757530811 0.552102151386705 1.34983262136272 0.633610863822779 Q9H307 PNN Q9H307.S100.p_PNN Q9H307_S100s _1_1_100_100 Q9H307 Q9H307 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15018.15018.3 22.03 16.83 21.528 5 1 1 0 1114.241 3260.7465 S100s Hydrogen 98 (R) QEsDPEDDDVKKPALQSSVVATSK (E) QES(0.99)DPEDDDVKKPALQS(0.0)S(0.0)VVAT(0.0)S(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S PNN 81726.4 49 3 180.1 480.36 HUMAN 1 6.3678 2.5798 RRFSFCCSPEPEAEA-p Q13501;S28-p RRFSFCCSPEPEAEA 0.927038488214909 0.119416691644614 -0.0236666666666667 -0.201 0.649590462352697 12.1720405095461 -0.0236666666666667 -0.201 0.86107494731746 0.0606451324707321 -0.183514454586448 -2.36168912075999 Q13501 SQSTM1 Q13501.S28.p_SQSTM1 Q13501_S28s _1_1_28_28 Q13501 Q13501 Sequestosome-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21537.21537.3 20.24 18.54 4.633 2 1 1 0 979.0699 2855.2272 S28s TMT10 23 (R) FSFCCsPEPEAEAEAAAGPGPCER (L) FS(0.0)FCCS(0.99)PEPEAEAEAAAGPGPCER C:Carbamidomethylation,s:Phosphorylated S SQSTM1 48485.1 1 2 541.1 276.49 HUMAN 1 -0.6496 -12.172 RRFTEHNSSPNVSGS-p Q9UJF2-2;S775-p RRFTEHNSSPNVSGS 0.814882670518065 0.186717066077068 -0.0456666666666667 -0.143 1.70601760866277 9.58672491548362 -0.0456666666666667 -0.143 0.675146839742227 0.109983492998245 -0.442666328156692 -1.90925462347194 Q9UJF2 RASAL2 Q9UJF2.2.S775.p_RASAL2 Q9UJF2-2_S775sS776s_2_2_775_776 Q9UJF2-2 Q9UJF2-2 Isoform 2 of Ras GTPase-activating protein nGAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19046.19046.3 11.08 11.08 3.06 7 2 2 0 898.7576 2534.3251 S775s S776s TMT10 770 (R) FTEHNssPNVSGSLSSGLQK (I) FT(0.0)EHNS(0.99)S(0.99)PNVS(0.0)GS(0.0)LS(0.0)S(0.0)GLQK K:TMT10,s:Phosphorylated S RASAL2 145265.6 2 44 281.2 388.28 HUMAN 1 -1.706 -9.5867 RRGADFDSWGQLVEA-p Q96BJ3;S24-p RRGADFDSWGQLVEA 0.941601783060378 0.441016680456103 -0.0156666666666667 0.115 0.51408143745878 4.73490060791111 -0.0156666666666667 0.115 0.888365851905441 0.336132061635112 -0.147116829865085 1.05504167758745 Q96BJ3 AIDA Q96BJ3.S24.p_AIDA Q96BJ3_S24s _1_1_24_24 Q96BJ3 Q96BJ3 Axin interactor, dorsalization-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.37154.37154.3 21.14 21.14 16.975 2 1 1 0 935.7849 2725.3671 S24s TMT10 19 (R) GADFDsWGQLVEAIDEYQILAR (H) GADFDS(0.99)WGQLVEAIDEY(0.0)QILAR s:Phosphorylated S AIDA 35193.7 1 1 2219.1 92.95 HUMAN 1 -0.5141 4.7349 RRGEAAGSPVPTPPR-p Q9HB09;S113-p RRGEAAGSPVPTPPR 0.698366744053494 0.899226362092759 0.0896666666666667 -0.016 2.92998778402821 0.646104462639317 0.0896666666666667 -0.016 0.509332303721105 0.861766393369348 0.706155798242861 -0.182571731027933 Q9HB09 BCL2L12 Q9HB09.S113.p_BCL2L12 Q9HB09_S113sT117tS121s_3_3_113_121 Q9HB09 Q9HB09|I6LJZ7|A0A087WSV0|I6LJZ9|M0QZM6|M0R1Z8 Bcl-2-like protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19080.19080.4 9.33 9.33 3.453 5 3 3 0 830.3755 3078.5806 S113s T117t S121s TMT10 107 (R) RGEAAGsPVPtPPRsPAQEEPTDFLSR (L) RGEAAGS(0.99)PVPT(0.99)PPRS(0.99)PAQEEPT(0.0)DFLS(0.0)R s:Phosphorylated S,t:Phosphorylated T BCL2L12 37277.2 2 9 1874.1 109.69 HUMAN 1 2.93 -0.6461 RRGFRRLSLDIQSPP-p Q9NSI6-2;S696-p RRGFRRLSLDIQSPP 0.338134809606962 0.791409097629011 -0.152 0.058 8.76636037306472 1.4138196007432 -0.152 0.0580000000000001 0.132850735365718 0.722134410213218 -1.76791959221081 0.374645850524484 Q9NSI6 BRWD1 Q9NSI6.2.S696.p_BRWD1 Q9NSI6-2_S696s _1_1_696_696 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19747.19747.4 18.5 18.5 7.994 2 1 1 0 536.8031 2064.2239 S696s TMT10 694 (R) RLsLDIQSPPNIGLRR (S) RLS(0.99)LDIQS(0.0)PPNIGLRR s:Phosphorylated S BRWD1 259915.1 6 5 208.1 444.81 HUMAN 1 -8.7664 1.4138 RRGGIPASPIDPFQS-p Q96LD4;S588-p RRGGIPASPIDPFQS 0.821837362955326 0.283044454425062 -0.0473333333333333 -0.137 1.64041307271087 7.227841023604 -0.0473333333333333 -0.137 0.685423030364248 0.189328457945566 -0.42760958021811 -1.50041145124696 Q96LD4 TRIM47 Q96LD4.S588.p_TRIM47 Q96LD4_S588s _1_1_588_588 Q96LD4 Q96LD4|Q96LD4-2 Tripartite motif-containing protein 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18498.18498.3 16.5 16.5 2.704 2 1 1 0 636.3297 1827.0074 S588s TMT10 582 (R) RGGIPAsPIDPFQSR (L) RGGIPAS(0.99)PIDPFQS(0.0)R s:Phosphorylated S TRIM47 71014.3 6 2 4024.1 38.93 HUMAN 1 -1.6404 -7.2278 RRGGIPQSPALHRAA-p Q5T011;S1717-p RRGGIPQSPALHRAA 0.194002306690035 0.0499073205008784 0.366666666666667 0.266666666666667 13.889468777837 17.4057606467406 0.366666666666667 0.266666666666667 0.0408369334370973 0.0181728873848536 2.67264712605989 3.34036346703932 Q5T011 SZT2 Q5T011.S1717.p_SZT2 Q5T011_S1717s _1_1_1717_1717 Q5T011 Q5T011 KICSTOR complex protein SZT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8240.8240.3 12.96 11.69 99 1 1 1 0 481.2556 1361.7851 S1717s TMT10 1712 (R) GGIPQsPALHR (A) GGIPQS(1.0)PALHR s:Phosphorylated S SZT2 382015.9 1 7 964.1 193.97 HUMAN 1 13.8895 17.4058 RRGGLRATAGPRLSR-p Q8ND30;T533-p RRGGLRATAGPRLSR 0.154208880727061 0.0167000243121098 0.293 0.387333333333333 16.3122135908512 24.5373643896621 0.293 0.387333333333333 0.0233764544144759 0.00351773857364903 3.12837042399189 4.92155656172108 Q8ND30 PPFIBP2 Q8ND30.T533.p_PPFIBP2 Q8ND30_T533t _1_1_533_533 Q8ND30 Q8ND30|Q8ND30-2|Q8ND30-3|E9PP16 Liprin-beta-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.4521.4521.3 10.59 4.9 99 1 1 1 0 422.2285 1184.7061 T533t TMT10 528 (R) GGLRAtAGPR (L) GGLRAT(1.0)AGPR t:Phosphorylated T PPFIBP2 99112.4 2 6 1287.1 158.1 HUMAN 1 16.3122 24.5374 RRGHHDDSDEEASPE-p Q5VT06;S1648-p RRGHHDDSDEEASPE 0.572719143373661 0.192768552675818 0.093 -0.140333333333333 4.4551375999019 9.4012057928327 0.093 -0.140333333333333 0.358497589620921 0.114783488771302 1.00318959353188 -1.87713069172202 Q5VT06 CEP350 Q5VT06.S1648.p_CEP350 Q5VT06_S1648s _1_1_1648_1648 Q5VT06 Q5VT06 Centrosome-associated protein 350 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3976.3976.3 19.19 19.19 6.052 2 1 1 0 697.6411 2010.9405 S1648s TMT10 1643 (R) GHHDDsDEEASPEK (T) GHHDDS(0.99)DEEAS(0.0)PEK K:TMT10,s:Phosphorylated S CEP350 352521.4 2 13 265.1 395.34 HUMAN 1 4.4551 -9.4012 RRGIRYRTIDEHDAI-p Q8N131;T200-p RRGIRYRTIDEHDAI 0.856296769318185 0.456898927853257 0.0303333333333333 0.111666666666667 1.31128706822152 4.53626469031417 0.028046975948263 0.111666666666667 0.739386119290786 0.351862943107267 0.350236551283686 1.01815634356143 Q8N131 TMEM123 Q8N131.T200.p_TMEM123 Q8N131_T200t _1_1_200_200 Q8N131 Q8N131|Q8N131-2|E9PKT4 Porimin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15652.15652.3 13.95 11.52 7.277 2 1 1 0 552.2718 1574.8376 T200t TMT10 198 (R) YRtIDEHDAII (-) Y(0.0)RT(0.99)IDEHDAII t:Phosphorylated T TMEM123 21587.8 1 1 6105.1 13.95 HUMAN 1 1.3113 4.5363 RRGLAPNTPGKARKL-p O43663;T481-p RRGLAPNTPGKARKL 0.714570848433642 0.00162277786781607 -0.138 -1.33033333333333 2.75084037299063 44.6205572131432 -0.138 -1.33033333333333 0.530781726419771 3.45099459176e-05 -0.669334312655772 -12.4184805520634 O43663 PRC1 O43663.T481.p_PRC1 O43663_T481t _1_1_481_481 O43663 O43663|O43663-4|O43663-2|O43663-3 Protein regulator of cytokinesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7456.7456.2 10.83 10.83 99 1 1 1 0 582.3049 1083.636 T481t Hydrogen 476 (R) GLAPNtPGK (A) GLAPNT(1.0)PGK K:TMT10-Lys-Only,t:Phosphorylated T PRC1 72290 3 5 715.1 238.03 HUMAN 1 -2.7508 -44.6206 RRGLLYDSDEEDEER-p P49736;S139-p RRGLLYDSDEEDEER 0.48537558187556 0.552659965165097 -0.097 0.0593333333333333 5.78469633167555 3.46820037953033 -0.097 0.0593333333333333 0.263955287929914 0.449966272357982 -1.24611243400941 0.813880438473506 P49736 MCM2 P49736.S139.p_MCM2 P49736_S139s _1_1_139_139 P49736 P49736 DNA replication licensing factor MCM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9841.9841.4 22.48 22.48 5.553 2 1 1 0 583.5234 2251.104 S139s Hydrogen 134 (R) GLLYDsDEEDEERPARK (R) GLLY(0.0)DS(0.99)DEEDEERPARK K:TMT10-Lys-Only,s:Phosphorylated S MCM2 102579 37 6 259.1 397.63 HUMAN 1 -5.7847 3.4682 RRGNDPLTSSPGRSS-p P49736;T25-p RRGNDPLTSSPGRSS 0.549780068218602 0.116793277977743 0.107666666666667 -0.306666666666667 4.79292829070445 12.2990089842724 0.107666666666667 -0.306666666666667 0.331670748544994 0.0588978038805855 1.06597082951871 -2.38426080170464 P49736 MCM2 P49736.T25.p_MCM2 P49736_T25tS26sS27s_3_3_25_27 P49736 P49736|F8WDM3 DNA replication licensing factor MCM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9245.9245.3 9.59 5.97 99 3 3 3 0 575.904 1485.7971 T25t S26s S27s TMT10 19 (R) RGNDPLtssPGR (S) RGNDPLT(1.0)S(1.0)S(1.0)PGR t:Phosphorylated T,s:Phosphorylated S MCM2 102579 2 14 259.1 397.63 HUMAN 1 4.7929 -12.299 RRGPGVPSPQPDVTM-p P78537;S22-p RRGPGVPSPQPDVTM 0.772883727112607 0.894370647501386 -0.042 0.0183333333333333 2.1398455217744 0.680366789789746 -0.042 0.0183333333333333 0.610963756454647 0.854994500017781 -0.539553837406137 0.191642873679391 P78537 BLOC1S1 P78537.S22.p_BLOC1S1 P78537_S22s _1_1_22_22 P78537 P78537|F8VP73|F8W036|F8VNQ1 Biogenesis of lysosome-related organelles complex 1 subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15247.15247.3 11.47 11.47 6.971 3 1 1 0 701.6919 2023.0956 S22s TMT10 16 (R) RGPGVPsPQPDVTMLSR (L) RGPGVPS(0.99)PQPDVT(0.0)MLS(0.0)R s:Phosphorylated S BLOC1S1 17319.4 3 1 5513.1 18.63 HUMAN 1 -2.1398 0.6804 RRGRATDSLPGKFED-p Q9BUB5;S39-p RRGRATDSLPGKFED 0.0373980687278816 0.0509683801015723 -0.547666666666667 -0.250666666666667 32.589374779021 17.2624630101087 -0.547666666666667 -0.250666666666667 0.000550886997739268 0.0187825130383879 -7.26030498243445 -3.31193670677229 Q9BUB5 MKNK1 Q9BUB5.S39.p_MKNK1 Q9BUB5_S39s _1_1_39_39 Q9BUB5 Q9BUB5|Q9BUB5-2|Q9BUB5-3|E9PMM8|E9PN34 MAP kinase-interacting serine/threonine-protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22880.22880.4 15.35 15.35 2.524 3 1 1 0 593.0575 2289.2404 S39s TMT10 36 (R) ATDsLPGKFEDMYK (L) AT(0.0)DS(0.99)LPGKFEDMY(0.0)K K:TMT10,s:Phosphorylated S MKNK1 52083.2 4 1 1937.1 106.18 HUMAN 1 -32.5894 -17.2625 RRGRSSLSLAKSVST-p V9GYM8;S190-p RRGRSSLSLAKSVST 0.489507873402064 0.988931562210736 -0.116666666666667 -0.00233333333333332 5.71873359106316 0.0728738717789052 -0.116666666666667 -0.00233333333333332 0.267994968806215 0.983360168112615 -1.23429181566259 -0.02183558211662 V9GYM8 NotFound V9GYM8.S190.p_NotFound V9GYM8_S190s _1_1_190_190 V9GYM8 V9GYM8|Q92974|Q92974-2 Rho guanine nucleotide exchange factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14904.14904.2 10.19 3.87 2.729 3 1 1 0 622.357 1163.74 S190s TMT10 187 (R) SSLsLAK (S) S(0.0)S(0.0)LS(0.99)LAK K:TMT10,s:Phosphorylated S ARHGEF2 117095.6 1 9 380.1 335.31 HUMAN 1 -5.7187 -0.0729 RRGSLLGSMKLRKSE-p Q9HDC5;S220-p RRGSLLGSMKLRKSE 0.311376194225896 0.00254880172900523 -0.155666666666667 -0.826666666666667 9.478355255977 39.640996877107 -0.155666666666667 -0.826666666666667 0.112762442507822 0.000108617627471029 -1.8912071581728 -9.97105068744013 Q9HDC5 JPH1 Q9HDC5.S220.p_JPH1 Q9HDC5_S220s _1_1_220_220 Q9HDC5 Q9HDC5 Junctophilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13811.13811.3 10.99 10.99 10.986 2 1 1 0 496.2781 1406.8554 S220s TMT10 214 (R) RGSLLGsMK (L) RGS(0.0)LLGS(0.99)MK K:TMT10,s:Phosphorylated S JPH1 72141.1 1 4 675.1 247.46 HUMAN 1 -9.4784 -39.641 RRGSSPGSLEIPKDL-p Q6GYQ0-2;S864-p RRGSSPGSLEIPKDL 0.266142547410633 0.0221420189415373 -0.200666666666667 -0.470333333333333 10.8944735848677 22.6042900760852 -0.200666666666667 -0.470333333333333 0.0813865504710696 0.00548998290839393 -2.13763205765606 -4.45661951507722 Q6GYQ0 RALGAPA1 Q6GYQ0.2.S864.p_RALGAPA1 Q6GYQ0-2_S864s _1_1_864_864 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7|Q6GYQ0-4|Q6GYQ0-3 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17839.17839.3 8.25 6.35 2.247 3 1 1 0 537.2919 1529.8939 S864s TMT10 859 (R) GSSPGsLEIPK (D) GS(0.0)S(0.0)PGS(0.99)LEIPK K:TMT10,s:Phosphorylated S RALGAPA1 236609.9 2 15 317.1 366.49 HUMAN 1 -10.8945 -22.6043 RRHHNHGSPHLKAKH-p Q9UK58;S445-p RRHHNHGSPHLKAKH 0.251704693334651 0.668018635747631 -0.315333333333333 0.408 11.4290972053359 2.39808962927528 -0.315333333333333 0.408 0.0719598549835596 0.575693117027839 -2.23146184179999 0.59518784333467 Q9UK58 CCNL1 Q9UK58.S445.p_CCNL1 Q9UK58_S445s _1_1_445_445 Q9UK58 Q9UK58 Cyclin-L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.2962.2962.4 11.28 11.28 99 1 1 1 0 426.224 1621.9076 S445s TMT10 440 (R) HHNHGsPHLK (A) HHNHGS(1.0)PHLK K:TMT10,s:Phosphorylated S CCNL1 60031.9 3 7 883.1 206.76 HUMAN 1 -11.4291 2.3981 RRHSHSHSPMSTRRR-p P62995;S99-p RRHSHSHSPMSTRRR 0.0478194935682717 0.325511214091535 0.807 0.395333333333333 29.3042438032907 6.4503738003012 0.807 0.395333333333333 0.00117375003890956 0.226444939646015 6.22319967852911 1.36407005691597 P62995 TRA2B P62995.S99.p_TRA2B P62995_S99s _1_1_99_99 P62995 P62995 Transformer-2 protein homolog beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.1973.2110.3 9.11 9.11 1.567 5 1 1 0 524.9028 1492.7277 S99s TMT10 94 (R) HSHSHsPMSTR (R) HS(0.0)HS(0.0)HS(0.99)PMS(0.0)T(0.0)R s:Phosphorylated S TRA2B 33779.2 2 103 8.3 1346.57 HUMAN 1 29.3042 6.4504 RRIARRGSCVTQVGL-p P78527;S1790-p RRIARRGSCVTQVGL 0.949569876341279 0.0435225593042151 -0.0116666666666667 0.274 0.444718240985654 18.2383361032672 -0.0116666666666667 0.274 0.90266826835122 0.0150025951440682 -0.128136836349964 3.50774175209493 P78527 PRKDC P78527.S1790.p_PRKDC P78527_S1790s _1_1_1790_1790 P78527 P78527|P78527-2 DNA-dependent protein kinase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33531.33531.4 19.02 17.68 2.75 4 1 1 0 725.1266 2817.5156 S1790s TMT10 1788 (R) RGsCVTQVGLLESVYEMFRK (D) RGS(0.99)CVT(0.0)QVGLLES(0.0)VY(0.0)EMFRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRKDC 474044.1 8 7 362.1 342.68 HUMAN 1 -0.4447 18.2383 RRIEHLGSTKSLNHS-p Q63HR2-4;S112-p RRIEHLGSTKSLNHS 0.30691553421572 0.652437034763859 -0.191666666666667 -0.0553333333333333 9.59272593721564 2.53237356288155 -0.191666666666667 -0.0553333333333333 0.109831624261617 0.558165055709378 -1.91103143544317 -0.623639387069157 Q63HR2 TNS2 Q63HR2.4.S112.p_TNS2 Q63HR2-4_S112s _1_1_112_112 Q63HR2-4 Q63HR2-4|Q63HR2-6|F8VV64|Q63HR2-2 Isoform 4 of Tensin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7047.7047.3 12.6 12.6 1.143 2 1 1 0 526.9641 1498.9106 S112s TMT10 106 (R) RIEHLGsTK (S) RIEHLGS(0.99)T(0.0)K K:TMT10,s:Phosphorylated S TNS2 155500.6 5 1 453.1 308.04 HUMAN 1 -9.5927 -2.5324 RRIHKEASPNRIRV_-p Q3T906;S1250-p RRIHKEASPNRIRV_ 0.0797989207565665 0.00389142811872595 1.441 -1.499 23.4461578998853 35.5762533444684 1.441 -1.499 0.00452255867470221 0.000276932971402524 4.66069798873768 -8.30879025335583 Q3T906 GNPTAB Q3T906.S1250.p_GNPTAB Q3T906_S1250s _1_1_1250_1250 Q3T906 Q3T906 N-acetylglucosamine-1-phosphotransferase subunits alpha/beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4562.4562.3 9.74 4.7 99 1 1 1 0 530.6245 1509.8902 S1250s TMT10 1245 (R) IHKEAsPNR (I) IHKEAS(1.0)PNR K:TMT10,s:Phosphorylated S GNPTAB 144874.4 2 1 6754.1 9.74 HUMAN 1 23.4462 -35.5763 RRILNLLSPSDGERF-p Q9Y5Q9;S282-p RRILNLLSPSDGERF 0.803071219855168 0.76142739997274 -0.0423333333333333 0.03 1.83397689033508 1.63652301974856 -0.0423333333333333 0.03 0.65554470067231 0.686037251013585 -0.471712832376586 0.426666744404518 Q9Y5Q9 GTF3C3 Q9Y5Q9.S282.p_GTF3C3 Q9Y5Q9_S282s _1_1_282_282 Q9Y5Q9 Q9Y5Q9|Q9Y5Q9-2 General transcription factor 3C polypeptide 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27760.27760.3 11.42 11.42 3.535 2 1 1 0 541.6163 1542.8689 S282s TMT10 277 (R) ILNLLsPSDGER (F) ILNLLS(0.99)PS(0.0)DGER s:Phosphorylated S GTF3C3 102069.2 3 4 2873.1 67.61 HUMAN 1 -1.834 1.6365 RRIPRAPSQHIFFVQ-p Q8N3E9;S105-p RRIPRAPSQHIFFVQ 0.283356232329426 0.158882149624186 0.252333333333333 0.240666666666667 10.3427253809117 10.5103518548457 0.252333333333333 0.240666666666667 0.0924118068900966 0.0889129079860349 2.04132158214029 2.06964701228622 Q8N3E9 PLCD3 Q8N3E9.S105.p_PLCD3 Q8N3E9_S105s _1_1_105_105 Q8N3E9 Q8N3E9 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19337.19337.4 20.47 20.47 99 1 1 1 0 547.788 2108.1603 S105s TMT10 103 (R) APsQHIFFVQHIEAVR (E) APS(1.0)QHIFFVQHIEAVR s:Phosphorylated S PLCD3 90169.7 4 2 1567.1 131.06 HUMAN 1 10.3427 10.5104 RRISACLSDYSLASD-p Q9ULE0;S567-p RRISACLSDYSLASD 0.263920652188996 0.522353737898739 -0.189333333333333 -0.0643333333333333 10.9736416465477 3.7901760727282 -0.189333333333333 -0.0643333333333333 0.0799163859012702 0.417813427209362 -2.15149221314693 -0.876660064857233 Q9ULE0 WWC3 Q9ULE0.S567.p_WWC3 Q9ULE0_S567s _1_1_567_567 Q9ULE0 Q9ULE0 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29263.29263.4 16.11 16.11 1.48 7 1 1 0 764.3876 2974.5596 S567s TMT10 562 (R) ISACLsDYSLASDSGVFEPLTKR (N) IS(0.0)ACLS(0.99)DY(0.0)S(0.0)LAS(0.0)DS(0.0)GVFEPLT(0.0)KR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WWC3 123814.7 3 17 161.1 495.35 HUMAN 1 -10.9736 -3.7902 RRISHEGSPVKPVAI-p Q96II8-2;S419-p RRISHEGSPVKPVAI 0.506520727045966 0.00898875481129879 -0.0936666666666667 -0.836666666666667 5.45173055900755 28.974774901737 -0.0936666666666667 -0.836666666666667 0.284988243164407 0.00126625889700971 -1.1862338086403 -6.11689830229473 Q96II8 LRCH3 Q96II8.2.S419.p_LRCH3 Q96II8-2_S419s _1_1_419_419 Q96II8-2 Q96II8-2|Q96II8-3 Isoform 2 of Leucine-rich repeat and calponin homology domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11626.11626.4 14.13 14.13 5.899 2 1 1 0 507.7916 1948.1744 S419s TMT10 414 (R) ISHEGsPVKPVAIR (E) IS(0.0)HEGS(0.99)PVKPVAIR K:TMT10,s:Phosphorylated S LRCH3 90369.5 5 6 1119.1 175.39 HUMAN 1 -5.4517 -28.9748 RRKADKESRPENEEE-p O75695;S15-p RRKADKESRPENEEE 0.152207539398086 0.10988033291554 0.282666666666667 0.184 16.4580720220134 12.6661077435073 0.282666666666667 0.184 0.022604390317567 0.0541239177821936 3.15664649760275 2.44976876921401 O75695 RP2 O75695.S15.p_RP2 O75695_S15s _1_1_15_15 O75695 O75695 Protein XRP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.3936.3936.5 8.97 3.98 99 1 1 1 0 588.5222 2858.6142 S15s TMT10 10 (R) KADKEsRPENEEERPK (Q) KADKES(1.0)RPENEEERPK K:TMT10,s:Phosphorylated S RP2 40496.2 1 1 3875.1 41.48 HUMAN 1 16.4581 12.6661 RRKARLGSVSLDLCD-p Q8N6R0;S267-p RRKARLGSVSLDLCD 0.207219378790471 0.0688340947029094 -0.268666666666667 -0.24 13.2141981657945 15.4572050958001 -0.268666666666667 -0.24 0.0477067886626448 0.0284629225089728 -2.54973688625787 -2.96264235841867 Q8N6R0 METTL13 Q8N6R0.S267.p_METTL13 Q8N6R0_S267s _1_1_267_267 Q8N6R0 Q8N6R0|Q8N6R0-4|Q8N6R0-3|Q8N6R0-2 Methyltransferase-like protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23090.23090.3 18.18 18.18 1.336 3 1 1 0 700.6543 2019.9855 S267s TMT10 265 (R) LGsVSLDLCDGDTGEPR (Y) LGS(0.99)VS(0.0)LDLCDGDT(0.0)GEPR C:Carbamidomethylation,s:Phosphorylated S METTL13 79622.3 2 2 3629.1 46.6 HUMAN 1 -13.2142 -15.4572 RRKDREDSPERCSDS-p Q14677-3;S227-p RRKDREDSPERCSDS 0.0975419138893254 0.111430762168816 -0.330666666666667 -0.197666666666667 21.4073308408108 12.5807416278342 -0.330666666666667 -0.197666666666667 0.00723214152011132 0.0551983171207879 -4.18770084758425 -2.43450156504176 Q14677 CLINT1 Q14677.3.S227.p_CLINT1 Q14677-3_S227s _1_1_227_227 Q14677-3 Q14677-3|Q14677-2 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3523.3523.3 12.12 12.12 4.422 3 1 1 0 831.3605 2412.0985 S227s TMT10 223 (K) DREDsPERCSDSDEEK (K) DREDS(0.99)PERCS(0.0)DS(0.0)DEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CLINT1 70350.7 4 16 632.1 256.73 HUMAN 1 -21.4073 -12.5807 RRKEDEVSIGSAPLA-p Q7Z7G8;S999-p RRKEDEVSIGSAPLA 0.18805512807753 0.704067513949742 -0.203666666666667 -0.0406666666666666 14.2402020203352 2.09353807917185 -0.203666666666667 -0.0406666666666666 0.0376686276298055 0.617513123995623 -2.73712756337962 -0.529355966103459 Q7Z7G8 VPS13B Q7Z7G8.S999.p_VPS13B Q7Z7G8_S999s _1_1_999_999 Q7Z7G8 Q7Z7G8|Q7Z7G8-6|Q7Z7G8-2|Q7Z7G8-3 Vacuolar protein sorting-associated protein 13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14471.14471.3 7.43 7.43 1.215 2 1 1 0 789.7808 2287.3589 S999s TMT10 993 (R) RKEDEVsIGSAPLAK (Q) RKEDEVS(0.99)IGS(0.0)APLAK K:TMT10,s:Phosphorylated S VPS13B 454589.9 1 4 766.1 229.13 HUMAN 1 -14.2402 -2.0935 RRKIPQCSQLQEDVD-p Q8N0S6-2;S53-p RRKIPQCSQLQEDVD 0.780774653521955 0.321499801754901 -0.0496666666666667 0.107333333333333 2.06726215736732 6.51541237781227 -0.0496666666666667 0.107333333333333 0.621260560646959 0.223079037607036 -0.523646733095776 1.37553850787809 Q8N0S6 CENPL Q8N0S6.2.S53.p_CENPL Q8N0S6-2_S53s _1_1_53_53 Q8N0S6-2 Q8N0S6-2|Q8N0S6-3 Isoform 2 of Centromere protein L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16817.16817.4 16.3 12.24 99 1 1 1 0 670.855 2600.4321 S53s TMT10 48 (R) KIPQCsQLQEDVDPQK (V) KIPQCS(1.0)QLQEDVDPQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CENPL 44423 3 3 2413.1 84.52 HUMAN 1 -2.0673 6.5154 RRKLAFRSGEARDWS-p Q86YP4-3;S513-p RRKLAFRSGEARDWS 0.659829317652971 0.0194802086299571 0.149 -0.488 3.38350158334722 23.4849550368416 0.149 -0.488 0.458827924763542 0.00448233690603157 0.797285210969076 -4.66464784733258 Q86YP4 GATAD2A Q86YP4.3.S513.p_GATAD2A Q86YP4-3_S513s _1_1_513_513 Q86YP4-3 Q86YP4-3 Isoform 3 of Transcriptional repressor p66-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9448.9448.3 8.62 8.62 99 1 1 1 0 439.2289 1235.7058 S513s TMT10 509 (K) LAFRsGEAR (D) LAFRS(1.0)GEAR s:Phosphorylated S GATAD2A 68475 2 10 1046.1 184.48 HUMAN 1 3.3835 -23.485 RRKLDFNSPGGSSPV-p Q9Y2F5;S939-p RRKLDFNSPGGSSPV 0.0719549135296335 0.00927799623665531 -0.368 -0.668 24.6510189119528 28.7045607843244 -0.368 -0.668 0.00342687378150034 0.00134754700012181 -4.95593014228591 -6.0384318486142 Q9Y2F5 ICE1 Q9Y2F5.S939.p_ICE1 Q9Y2F5_S939s _1_1_939_939 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14172.14172.3 17.51 17.51 1.141 7 1 1 0 998.459 2913.4049 S939s TMT10 934 (R) KLDFNsPGGSSPVENSDCSTNSR (L) KLDFNS(0.99)PGGS(0.0)S(0.0)PVENS(0.0)DCS(0.0)T(0.0)NS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ICE1 250910.2 2 9 216.1 433.09 HUMAN 1 -24.651 -28.7046 RRKQKLASPQPSYAA-p Q5TGY3;S596-p RRKQKLASPQPSYAA 0.451712086772319 0.0571041591939199 -0.168666666666667 -0.248333333333333 6.37298081192929 16.5684769630132 -0.168666666666667 -0.248333333333333 0.230516447913596 0.0220369914771826 -1.35074573729946 -3.17577572647441 Q5TGY3 AHDC1 Q5TGY3.S596.p_AHDC1 Q5TGY3_S596s _1_1_596_596 Q5TGY3 Q5TGY3 AT-hook DNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21367.21367.3 13.67 13.67 2.49 6 1 1 0 1126.9128 3298.741 S596s TMT10 594 (K) LAsPQPSYAADANDSKAEYSDVLAK (L) LAS(0.99)PQPS(0.0)Y(0.0)AADANDS(0.0)KAEY(0.0)S(0.0)DVLAK K:TMT10,s:Phosphorylated S AHDC1 170057.9 2 5 334.1 355.89 HUMAN 1 -6.373 -16.5685 RRKRKTRSLSVEIVY-p Q9NS56;S864-p RRKRKTRSLSVEIVY 0.839145106122672 0.313627809581638 -0.0293333333333333 -0.103666666666667 1.47471729967966 6.65733116032586 -0.0293333333333333 -0.103666666666667 0.712079150680744 0.215907080032438 -0.389054287715369 -1.40051905640163 Q9NS56 TOPORS Q9NS56.S864.p_TOPORS Q9NS56_S864sS866s_2_2_864_866 Q9NS56 Q9NS56|Q9NS56-2 E3 ubiquitin-protein ligase Topors HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26625.26625.3 12.05 12.05 7.122 3 2 2 0 614.6417 1681.9777 S864s S866s TMT10 864 (R) sLsVEIVYEGK (A) S(0.99)LS(0.99)VEIVY(0.0)EGK K:TMT10,s:Phosphorylated S TOPORS 120222.5 9 13 580.1 266.48 HUMAN 1 -1.4747 -6.6573 RRKRNQMTPDFSRQS-p J3KNU2;T243-p RRKRNQMTPDFSRQS 0.0525315331631904 0.358471607988196 0.506666666666667 0.0913333333333333 27.7955624691947 5.91104285494339 0.506666666666667 0.0913333333333333 0.0016612835054937 0.25638683105767 5.78846515622679 1.2684028064552 J3KNU2 NotFound J3KNU2.T243.p_NotFound J3KNU2_T243t _1_1_243_243 J3KNU2 E5RFF8|J3KNU2|Q8IX29|Q8IX29-2 F-box only protein 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10761.10761.2 8.61 8.61 3.865 2 1 1 0 702.8131 1324.6517 T243t TMT10 240 (R) NQMtPDFSR (Q) NQMT(0.99)PDFS(0.0)R t:Phosphorylated T FBXO16 37143.1 1 1 5091.1 23.1 HUMAN 1 27.7956 5.911 RRKRRRKSQLDSLKR-p Q14693-7;S211-p RRKRRRKSQLDSLKR 0.0526648577824593 0.0573268533878443 -0.567333333333333 0.256 27.7788434281091 16.5436187897163 -0.567333333333333 0.256 0.00166769127714928 0.0221634886167994 -5.78378265932108 3.17094371193578 Q14693 LPIN1 Q14693.7.S211.p_LPIN1 Q14693-7_S211s _1_1_211_211 Q14693-7 Q14693-7|Q14693-5 Isoform 7 of Phosphatidate phosphatase LPIN1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11544.11544.3 7.49 0.43 4.586 2 1 1 0 495.6104 1404.8575 S211s TMT10 211 (K) sQLDSLKR (D) S(0.99)QLDS(0.0)LKR K:TMT10,s:Phosphorylated S LPIN1 108658.1 2 2 2939.1 65.31 HUMAN 1 -27.7788 16.5436 RRKTMCGTLDYLPPE-p Q96GD4-5;T237-p RRKTMCGTLDYLPPE 0.275593372930551 0.890155722123356 0.19 -0.015 10.5902329694627 0.708845951817905 0.19 -0.015 0.0872924540665369 0.849406157250257 2.08446714913257 -0.199142576010918 Q96GD4 AURKB Q96GD4.5.T237.p_AURKB Q96GD4-5_T237t _1_1_237_237 Q96GD4-5 Q96GD4-5|Q96GD4-2|Q9UQB9|Q5Y191|Q96GD4-4|Q9UQB9-3|Q9UQB9-2|A0A0A0MSY3 Isoform 5 of Aurora kinase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27265.27265.3 9.78 9.78 1.117 3 1 1 0 764.6832 2212.065 T237t TMT10 233 (K) TMCGtLDYLPPEMIEGR (M) T(0.0)MCGT(0.99)LDY(0.0)LPPEMIEGR C:Carbamidomethylation,t:Phosphorylated T AURKB 39751.3 1 3 4692.1 27.88 HUMAN 1 10.5902 -0.7088 RRKVSPESSPDQEET-p Q8IYW5;S414-p RRKVSPESSPDQEET 0.225596004363036 0.0339566328439142 0.278666666666667 -0.269333333333333 12.4134622821871 19.7999287057965 0.278666666666667 -0.269333333333333 0.0573658947512697 0.0104714573795582 2.4058933632815 -3.83260325556748 Q8IYW5 RNF168 Q8IYW5.S414.p_RNF168 Q8IYW5_S411sS414sS415s_3_3_411_415 Q8IYW5 Q8IYW5 E3 ubiquitin-protein ligase RNF168 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19776.19776.3 11.5 11.5 2.796 5 3 3 0 997.7803 2751.4089 S411s S414s S415s Hydrogen 409 (R) KVsPEssPDQEETEINFTQK (L) KVS(0.99)PES(0.99)S(0.99)PDQEET(0.0)EINFT(0.0)QK K:TMT10-Lys-Only,s:Phosphorylated S RNF168 66159.9 3 11 1172.1 170.1 HUMAN 1 12.4135 -19.7999 RRLAAAASPHSGGRA-p O95613;S3274-p RRLAAAASPHSGGRA 0.739466638213317 0.0771131891275331 -0.068 -0.203666666666667 2.48441761033974 14.7644843455478 -0.068 -0.203666666666667 0.564362617396662 0.0333850142117328 -0.613594793043718 -2.83258273578528 O95613 PCNT O95613.S3274.p_PCNT O95613_S3274s _1_1_3274_3274 O95613 O95613|O95613-2 Pericentrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5259.5259.3 15.7 15.7 6.845 2 1 1 0 468.5718 1323.7331 S3274s TMT10 3269 (R) LAAAAsPHSGGR (A) LAAAAS(0.99)PHS(0.0)GGR s:Phosphorylated S PCNT 380826.2 3 19 222.1 428 HUMAN 1 -2.4844 -14.7645 RRLCRSLSEGLYPYP-p Q63HR2-4;S658-p RRLCRSLSEGLYPYP 0.815840126284847 0.853648815675612 -0.038 0.0276666666666667 1.69699346314508 0.967916556260965 -0.038 0.0276666666666667 0.676551176628276 0.800218052065968 -0.440601983829259 0.265785091340574 Q63HR2 TNS2 Q63HR2.4.S658.p_TNS2 Q63HR2-4_S658s _1_1_658_658 Q63HR2-4 Q63HR2-4|Q63HR2-6|F8VV64|Q63HR2-2|Q63HR2-5 Isoform 4 of Tensin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25720.25720.3 15.5 15.5 2.102 6 1 1 0 1057.5148 3090.5647 S658s TMT10 656 (R) SLsEGLYPYPPEMGKPATGDFGYR (A) S(0.0)LS(0.99)EGLY(0.0)PY(0.0)PPEMGKPAT(0.0)GDFGY(0.0)R K:TMT10,s:Phosphorylated S TNS2 155500.6 4 5 453.1 308.04 HUMAN 1 -1.697 0.9679 RRLEVLDSTKSSRES-p P47985;S99-p RRLEVLDSTKSSRES 0.878580170278046 0.00787666209730615 -0.038 0.485666666666667 1.10466304692688 30.0037851977558 -0.038 0.485666666666667 0.77541410254654 0.000999128805717639 -0.299929853479519 6.42309260229252 P47985 UQCRFS1 P47985.S99.p_UQCRFS1 P47985_S99s _1_1_99_99 P47985 P0C7P4|P47985 Cytochrome b-c1 complex subunit Rieske, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19741.19741.2 12.16 12.16 1.191 2 1 1 0 721.899 1362.8245 S99s TMT10 94 (R) LEVLDsTK (S) LEVLDS(0.99)T(0.0)K K:TMT10,s:Phosphorylated S UQCRFS1 29952.7 3 3 3209.1 57.37 HUMAN 1 -1.1047 30.0038 RRLGVQQSLGWVHYM-p P33552;S51-p RRLGVQQSLGWVHYM 0.331647864397022 0.985263771141859 -0.293666666666667 0.00233333333333337 8.95199640284935 0.095491494055187 -0.293666666666667 0.00233333333333337 0.127291780051854 0.978252239040429 -1.80005307483694 0.0285403531441002 P33552 CKS2 P33552.S51.p_CKS2 P33552_S51s _1_1_51_51 P33552 P33552 Cyclin-dependent kinases regulatory subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31197.31197.5 24.53 24.53 3.424 2 1 1 0 662.5449 3228.7342 S51s TMT10 46 (R) LGVQQsLGWVHYMIHEPEPHILLFR (R) LGVQQS(0.99)LGWVHY(0.0)MIHEPEPHILLFR s:Phosphorylated S CKS2 9860.2 2 1 4967.1 24.53 HUMAN 1 -8.952 0.0955 RRLNECISPVANEMN-p P23497-4;S18-p RRLNECISPVANEMN 0.744487889778061 0.0475205231748668 0.0656666666666667 0.256 2.43129159444268 17.6981076503693 0.0656666666666667 0.256 0.571308703846468 0.0169898378873561 0.602329490266093 3.39869996391967 P23497 SP100 P23497.4.S18.p_SP100 P23497-4_S18s _1_1_18_18 P23497-4 P23497-4|P23497-3|P23497-2|P23497-5 Isoform Sp100-C of Nuclear autoantigen Sp-100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14400.14400.5 23.75 19.2 11.969 2 1 1 0 650.3144 3167.5788 S18s TMT10 12 (R) RLNECIsPVANEMNHLPAHSHDLQR (M) RLNECIS(0.99)PVANEMNHLPAHS(0.0)HDLQR C:Carbamidomethylation,s:Phosphorylated S SP100 103285 6 1 542.1 276.37 HUMAN 1 2.4313 17.6981 RRLNQQPSQGLGPRG-p P36915;S68-p RRLNQQPSQGLGPRG 0.142827912098432 0.811823964095005 0.269333333333333 0.0376666666666667 17.2622311554383 1.2692086114091 0.269333333333333 0.0376666666666667 0.0187835157979896 0.746584791650565 3.31446324820548 0.340072197152516 P36915 GNL1 P36915.S68.p_GNL1 P36915_S68s _1_1_68_68 P36915 P36915 Guanine nucleotide-binding protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6966.6966.3 7.95 7.95 99 1 1 1 0 587.3115 1679.9503 S68s TMT10 62 (R) RLNQQPsQGLGPR (G) RLNQQPS(1.0)QGLGPR s:Phosphorylated S GNL1 69173.1 1 3 1812.1 113.26 HUMAN 1 17.2622 1.2692 RRLPQSLSQEGDFTP-p P17020;S131-p RRLPQSLSQEGDFTP 0.543328167061294 0.020025890583684 0.149333333333333 0.357666666666667 4.89004614558684 23.2878208124125 0.149333333333333 0.357666666666667 0.324336171124935 0.00469048680705166 1.08386943514689 4.61754405296789 P17020 ZNF16 P17020.S131.p_ZNF16 P17020_S131s _1_1_131_131 P17020 P17020 Zinc finger protein 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27303.27303.3 15.43 11.91 1.494 3 1 1 0 866.1098 2516.3493 S131s TMT10 125 (R) RLPQSLsQEGDFTPAAMGLLR (G) RLPQS(0.0)LS(0.99)QEGDFT(0.0)PAAMGLLR s:Phosphorylated S ZNF16 78866.5 1 2 2565.5 78.32 HUMAN 1 4.89 23.2878 RRLQKLESPVAH___-p Q86TM6;S613-p RRLQKLESPVAH___ 0.949272863477047 0.0048975805709655 -0.01 -0.580666666666667 0.447883458699536 33.7198834281758 -0.01 -0.580666666666667 0.902010626866905 0.000424630961590897 -0.129008302082433 -7.63463758672564 Q86TM6 SYVN1 Q86TM6.S613.p_SYVN1 Q86TM6_S613s _1_1_613_613 Q86TM6 Q86TM6|Q86TM6-3|Q86TM6-2 E3 ubiquitin-protein ligase synoviolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14970.14970.2 11.92 11.92 99 1 1 1 0 830.4653 1579.9572 S613s TMT10 608 (R) LQKLEsPVAH (-) LQKLES(1.0)PVAH K:TMT10,s:Phosphorylated S SYVN1 68197.1 10 2 3990.1 39.53 HUMAN 1 -0.4479 -33.7199 RRLQNRISEDVEERL-p P55081;S94-p RRLQNRISEDVEERL 0.152434937700836 0.435449080080588 -0.260333333333333 0.202333333333333 16.4285296334663 4.81083126430041 -0.260333333333333 0.202333333333333 0.0227586782818991 0.330306312481954 -3.15091099885111 1.06906595948898 P55081 MFAP1 P55081.S94.p_MFAP1 P55081_S94s _1_1_94_94 P55081 P55081 Microfibrillar-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10864.10864.3 11.48 7.84 99 1 1 1 0 599.6306 1716.9078 S94s TMT10 89 (R) LQNRIsEDVEER (L) LQNRIS(1.0)EDVEER s:Phosphorylated S MFAP1 51957.5 1 5 354.1 349.52 HUMAN 1 -16.4285 4.8108 RRLQRRLTEEFQNVR-p Q9UI43;T209-p RRLQRRLTEEFQNVR 0.7557794691721 0.221435052354208 -0.0456666666666667 0.132 2.32531784683206 8.62215626759746 -0.0456666666666667 0.132 0.58542088959049 0.137335993392765 -0.579698760175996 1.74235830816111 Q9UI43 FTSJ2 Q9UI43.T209.p_FTSJ2 Q9UI43_T209t _1_1_209_209 Q9UI43 Q9UI43|E9PGN6 rRNA methyltransferase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12875.12875.3 10.52 10.52 99 1 1 1 0 534.2737 1520.8383 T209t TMT10 207 (R) RLtEEFQNVR (I) RLT(1.0)EEFQNVR t:Phosphorylated T MRM2 27822.5 1 1 6620.1 10.52 HUMAN 1 -2.3253 8.6222 RRLRRSHSGPAGSFN-p Q9UJM3;S251-p RRLRRSHSGPAGSFN 0.162233033531411 0.0153465811137057 -0.240666666666667 -0.378666666666667 15.8181890076884 25.0907187412739 -0.240666666666667 -0.378666666666667 0.0261927500874615 0.00309690673021595 -3.03335798395322 -5.06044383270999 Q9UJM3 ERRFI1 Q9UJM3.S251.p_ERRFI1 Q9UJM3_S251s _1_1_251_251 Q9UJM3 Q9UJM3 ERBB receptor feedback inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9958.9958.3 12.09 5.39 2.311 3 1 1 0 688.6976 1984.1129 S251s TMT10 249 (R) SHsGPAGSFNKPAIR (I) S(0.0)HS(0.99)GPAGS(0.0)FNKPAIR K:TMT10,s:Phosphorylated S ERRFI1 51186.7 6 3 1507.1 135.54 HUMAN 1 -15.8182 -25.0907 RRLSPSASPPRRRHR-p A9Z1X7;S388-p RRLSPSASPPRRRHR 0.608004594906275 0.909796904423261 0.0933333333333333 -0.0273333333333333 4.00231957548714 0.574654258652639 0.0933333333333333 -0.0273333333333333 0.39789459749283 0.876061458010962 0.917572973968965 -0.163479915297228 A9Z1X7 NotFound A9Z1X7.S388.p_NotFound A9Z1X7_S388s _1_1_388_388 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9444.9444.2 8.65 3.81 2.375 3 1 1 0 610.816 1140.6574 S388s TMT10 383 (R) LSPSAsPPR (R) LS(0.0)PS(0.0)AS(0.99)PPR s:Phosphorylated S SRRM1 103445.7 3 8 8.1 1346.57 HUMAN 1 4.0023 -0.5747 RRLSQPESAEKHVTQ-p Q9UKV3;S714-p RRLSQPESAEKHVTQ 0.906665267605411 0.00643604816749604 0.0173333333333333 -0.488333333333333 0.835073425746556 31.5084162049876 0.0173333333333333 -0.488333333333333 0.825073535922691 0.000706575182731473 0.231980824903875 -6.89286305036954 Q9UKV3 ACIN1 Q9UKV3.S714.p_ACIN1 Q9UKV3_S714s _1_1_714_714 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6620.6620.3 12.71 12.71 12.708 2 1 1 0 561.6346 1602.9215 S714s TMT10 708 (R) RLSQPEsAEK (H) RLS(0.0)QPES(0.99)AEK K:TMT10,s:Phosphorylated S ACIN1 152258.2 3 26 32.2 899.18 HUMAN 1 0.8351 -31.5084 RRLSRKLSLRPTVAE-p J3KP75;S548-p RRLSRKLSLRPTVAE 0.764651986229889 0.270405004126434 0.072 0.123 2.23746148675717 7.47897824288758 0.072 0.123 0.597384364242101 0.178690792813835 0.560770251962876 1.54416606242794 J3KP75 NotFound J3KP75.S548.p_NotFound J3KP75_S548s _1_1_548_548 J3KP75 O75167-4|J3KP75|O75167-2|O75167-5 Phosphatase and actin regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17418.17418.4 11.54 11.54 2.238 2 1 1 0 530.8147 2040.2694 S548s TMT10 546 (R) KLsLRPTVAELQAR (R) KLS(0.99)LRPT(0.0)VAELQAR K:TMT10,s:Phosphorylated S PHACTR2 68408.7 3 7 2025.1 101.72 HUMAN 1 2.2375 7.479 RRLTRKLSQRPTVAE-p Q8IZ21;S628-p RRLTRKLSQRPTVAE 0.824384050430131 0.556162073931393 -0.0403333333333333 -0.0603333333333333 1.61745254973596 3.43344734870138 -0.0403333333333333 -0.0603333333333333 0.689056359062501 0.453581429224417 -0.422312662195817 -0.807032435158399 Q8IZ21 PHACTR4 Q8IZ21.S628.p_PHACTR4 Q8IZ21_S628s _1_1_628_628 Q8IZ21 Q8IZ21-2|Q8IZ21-3 Phosphatase and actin regulator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17793.17793.4 11.23 11.23 1.148 2 1 1 0 530.8155 2040.2694 S628s TMT10 626 (R) KLsQRPTVAELLAR (K) KLS(0.99)QRPT(0.0)VAELLAR K:TMT10,s:Phosphorylated S PHACTR4 78438 6 16 350.1 351.04 HUMAN 1 -1.6175 -3.4334 RRLTRKLSQRPTVEE-p Q9C0D0;S505-p RRLTRKLSQRPTVEE 0.303423649713577 0.334172656538678 -0.148 -0.28 9.70205121832161 6.30861341343265 -0.14968537201528 -0.28 0.107101333494468 0.233958408629164 -1.92998987369766 -1.33902571812072 Q9C0D0 PHACTR1 Q9C0D0.S505.p_PHACTR1 Q9C0D0_S505s _1_1_505_505 Q9C0D0 Q9C0D0|Q4VY12|Q4VY13 Phosphatase and actin regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9319.9319.5 10.4 10.4 4.081 2 1 1 0 456.6587 2199.2974 S505s TMT10 503 (R) KLsQRPTVEELRER (K) KLS(0.99)QRPT(0.0)VEELRER K:TMT10,s:Phosphorylated S PHACTR1 66763.3 2 12 638.1 255.38 HUMAN 1 -9.7021 -6.3086 RRLTSSVSCALDEAA-p Q8IWZ3-6;S180-p RRLTSSVSCALDEAA 0.771034218132474 0.611749341121048 0.0753333333333333 0.0683333333333333 2.16496828168105 2.90038034411545 0.0753333333333334 0.0683333333333334 0.607439699230282 0.512816470856102 0.545033248944669 0.700008367466164 Q8IWZ3 ANKHD1 Q8IWZ3.6.S180.p_ANKHD1 Q8IWZ3-6_S180s _1_1_180_180 Q8IWZ3-6 Q8IWZ3-6|O75179-4|O75179-3|A0A1W2PQ15|O75179-5|Q8IWZ3-2|Q8IWZ3-3|Q8IWZ3-5 Isoform 6 of Ankyrin repeat and KH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37300.37300.3 16.98 16.98 2.506 5 1 1 0 715.6884 2065.0797 S180s TMT10 175 (R) LTSSVsCALDEAAAALTR (M) LT(0.0)S(0.0)S(0.0)VS(0.99)CALDEAAAALT(0.0)R C:Carbamidomethylation,s:Phosphorylated S ANKHD1 279224.1 2 25 287.1 383.69 HUMAN 1 2.165 2.9004 RRLVEVDSSRQQEYD-p Q03252;S246-p RRLVEVDSSRQQEYD 0.36773033854316 0.291394708544913 0.121666666666667 -0.120666666666667 8.060220827806 7.06819454100392 0.121666666666667 -0.120666666666667 0.156306816254094 0.196417665916266 1.64560573861104 -1.47253429771043 Q03252 LMNB2 Q03252.S246.p_LMNB2 Q03252_S246s _1_1_246_246 Q03252 Q03252 Lamin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18648.18648.3 18.78 13.27 1.505 3 1 1 0 794.397 2301.2127 S246s TMT10 241 (R) LVEVDsSRQQEYDFK (M) LVEVDS(0.99)S(0.0)RQQEY(0.0)DFK K:TMT10,s:Phosphorylated S LMNB2 70061.3 2 25 440.2 312.01 HUMAN 1 8.0602 -7.0682 RRMATFGSAGSINYP-p O43295;S919-p RRMATFGSAGSINYP 0.0147628603234759 0.00354828925306984 -0.879666666666667 -0.742333333333333 43.3692962951166 36.5433598930819 -0.879666666666667 -0.742333333333333 4.60331156854577e-05 0.000221648098916219 -11.7860876712629 -8.6801200110612 O43295 SRGAP3 O43295.S919.p_SRGAP3 O43295_S919s _1_1_919_919 O43295 O43295|O43295-2 SLIT-ROBO Rho GTPase-activating protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18838.18838.4 9.42 9.42 1.128 4 1 1 0 614.3228 2374.3044 S919s TMT10 914 (R) MATFGsAGSINYPDKK (A) MAT(0.0)FGS(0.99)AGS(0.0)INY(0.0)PDKK K:TMT10,s:Phosphorylated S SRGAP3 125471.5 4 10 754.1 231.27 HUMAN 1 -43.3693 -36.5434 RRMGRSRSPATAKRG-p Q9UQ35;S486-p RRMGRSRSPATAKRG 0.774092565349424 0.239981607404973 0.051 0.129666666666667 2.12855012468929 8.16661824104389 0.051 0.129666666666667 0.61255485665987 0.152523996349775 0.537085866564245 1.66351378391027 Q9UQ35 SRRM2 Q9UQ35.S486.p_SRRM2 Q9UQ35_S484sS486s_2_2_484_486 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3207.3207.2 10.85 5.47 3.723 3 2 2 0 603.7783 1046.6156 S484s S486s Hydrogen 484 (R) sRsPATAK (R) S(0.99)RS(0.99)PAT(0.0)AK K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 42 178 2.1 3310.34 HUMAN 1 2.1286 8.1666 RRMKKSLSAPLHPEF-p Q53HC0;S211-p RRMKKSLSAPLHPEF 0.723464556533112 0.223833513329335 0.062 0.128 2.6610015089445 8.56400875694384 0.062 0.128 0.541875916178263 0.13918714423214 0.650674755908025 1.73229906949881 Q53HC0 CCDC92 Q53HC0.S211.p_CCDC92 Q53HC0_S211s _1_1_211_211 Q53HC0 Q53HC0 Coiled-coil domain-containing protein 92 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21711.21711.3 16.61 16.61 2.125 3 1 1 0 695.0081 2003.0436 S211s TMT10 209 (K) SLsAPLHPEFEEVYR (F) S(0.0)LS(0.99)APLHPEFEEVY(0.0)R s:Phosphorylated S CCDC92 37074.5 1 2 3168.1 58.81 HUMAN 1 2.661 8.564 RRMLRERSPSPPTIQ-p Q14687;S826-p RRMLRERSPSPPTIQ 0.733177391690238 0.51419439823657 0.047 -0.0613333333333333 2.55175518522873 3.87598357054618 0.047 -0.0613333333333333 0.555679635995589 0.409639326041145 0.627799598525399 -0.893200421593123 Q14687 GSE1 Q14687.S826.p_GSE1 Q14687_S826s _1_1_826_826 Q14687 Q14687|Q14687-3|Q14687-2 Genetic suppressor element 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8149.8354.3 12.77 12.77 2.695 4 1 1 0 622.3369 1785.0271 S826s TMT10 824 (R) ERsPSPPTIQSK (R) ERS(0.99)PS(0.0)PPT(0.0)IQS(0.0)K K:TMT10,s:Phosphorylated S GSE1 136446.7 6 8 221.1 428.09 HUMAN 1 2.5518 -3.876 RRMMGQRSPASERRP-p Q8N3V7-2;S304-p RRMMGQRSPASERRP 0.662355671026916 0.0511952944975014 0.0726666666666667 0.244666666666667 3.35165593664309 17.2294598971532 0.0726666666666666 0.244666666666667 0.462204752127221 0.0189257897133175 0.790975719497372 3.30540510417618 Q8N3V7 SYNPO Q8N3V7.2.S304.p_SYNPO Q8N3V7-2_S304s _1_1_304_304 Q8N3V7-2 Q8N3V7|Q8N3V7-2|Q8N3V7-3 Isoform 2 of Synaptopodin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4776.4776.3 12.3 8.38 2.39 2 1 1 0 520.2411 1478.7405 S304s TMT10 299 (R) MMGQRsPASER (R) MMGQRS(0.99)PAS(0.0)ER s:Phosphorylated S SYNPO 96794.1 2 4 947.1 196.99 HUMAN 1 3.3517 17.2295 RRMQPDCSNPLTLDE-p Q9UBB9;S392-p RRMQPDCSNPLTLDE 0.700854981475579 0.00925004074850009 0.0543333333333333 0.423333333333333 2.90291128730634 28.7309515831902 0.0531836221911266 0.423333333333333 0.512517703247829 0.00133938318285309 0.700622543369685 6.046060578249 Q9UBB9 TFIP11 Q9UBB9.S392.p_TFIP11 Q9UBB9_S392s _1_1_392_392 Q9UBB9 Q9UBB9 Tuftelin-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18787.18787.2 14.6 14.6 2.52 2 1 1 0 1108.4743 2135.9721 S392s TMT10 387 (R) MQPDCsNPLTLDECAR (I) MQPDCS(0.99)NPLT(0.0)LDECAR C:Carbamidomethylation,s:Phosphorylated S TFIP11 97217.4 2 5 1343.1 151.47 HUMAN 1 2.9029 28.731 RRNGSKDSLMEEKPQ-p Q9HCS5;S652-p RRNGSKDSLMEEKPQ 0.24984344746911 0.0111404332292139 0.202666666666667 0.435 11.4965609127001 27.3495978490096 0.202666666666667 0.435 0.0708506613890639 0.0018409424624325 2.24334330896038 5.65660553702157 Q9HCS5 EPB41L4A Q9HCS5.S652.p_EPB41L4A Q9HCS5_S649sS652s_2_2_649_652 Q9HCS5 Q9HCS5 Band 4.1-like protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13538.13538.5 9.47 4.97 1.705 5 2 2 0 717.17 3421.8879 S649s S652s TMT10 646 (R) RNGsKDsLMEEKPQTSTNNLAGK (H) RNGS(0.99)KDS(0.99)LMEEKPQT(0.0)S(0.0)T(0.0)NNLAGK K:TMT10,s:Phosphorylated S EPB41L4A 79741.9 3 17 696.1 241.4 HUMAN 1 11.4966 27.3496 RRNLRNQSYRAAMKG-p Q5VV41;S153-p RRNLRNQSYRAAMKG 0.94478758147709 0.926660621773207 -0.031 0.061 0.485966135940296 0.46757398632243 -0.031 0.0610000000000001 0.894135599487295 0.897930247507901 -0.13945302155216 0.134405491959639 Q5VV41 ARHGEF16 Q5VV41.S153.p_ARHGEF16 Q5VV41_S153s _1_1_153_153 Q5VV41 Q5VV41 Rho guanine nucleotide exchange factor 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7291.7291.3 9.42 9.42 9.419 2 1 1 0 536.2774 1526.8514 S153s TMT10 151 (R) NQsYRAAMK (G) NQS(0.99)Y(0.0)RAAMK K:TMT10,s:Phosphorylated S ARHGEF16 80388.8 1 5 597.1 263.65 HUMAN 1 -0.486 0.4676 RRNVGFESDTGGAFK-p Q9UKX7;S52-p RRNVGFESDTGGAFK 0.955750339780897 0.61079877964658 0.00833333333333333 -0.0516666666666667 0.385903896992935 2.90847195297489 0.00833333333333333 -0.0516666666666667 0.914975805571635 0.511861900336167 0.11184797728863 -0.701663039528585 Q9UKX7 NUP50 Q9UKX7.S52.p_NUP50 Q9UKX7_S52s _1_1_52_52 Q9UKX7 Q9UKX7|Q9UKX7-2 Nuclear pore complex protein Nup50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18881.18881.2 15.2 15.2 1.563 2 1 1 0 933.9567 1786.9376 S52s TMT10 47 (R) NVGFEsDTGGAFK (G) NVGFES(0.99)DT(0.0)GGAFK K:TMT10,s:Phosphorylated S NUP50 50542.6 2 1 2469.1 82.07 HUMAN 1 0.3859 -2.9085 RRPAPAVSPGSWKPG-p Q96JM3;S308-p RRPAPAVSPGSWKPG 0.628647939920457 0.0253754209709607 0.069 0.422 3.74605091148153 21.7147056836969 0.069 0.422 0.422080131189142 0.00673797556397586 0.868264713412221 4.25257096003 Q96JM3 CHAMP1 Q96JM3.S308.p_CHAMP1 Q96JM3_S308s _1_1_308_308 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17529.17529.4 15.45 11.46 4.208 3 1 1 0 794.945 3096.7826 S308s TMT10 302 (R) RPAPAVsPGSWKPGPPGSPRPWK (S) RPAPAVS(0.99)PGS(0.0)WKPGPPGS(0.0)PRPWK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 5 13 25.1 950.05 HUMAN 1 3.7461 21.7147 RRPASMGSEGLGGDA-p Q6DT37;S1495-p RRPASMGSEGLGGDA 0.411787607643824 0.0691861777541296 -0.144666666666667 0.205333333333333 7.1085301674036 15.4245702067268 -0.144666666666667 0.205333333333333 0.19460185835598 0.028677611653882 -1.47999779383969 2.95646888434437 Q6DT37 CDC42BPG Q6DT37.S1495.p_CDC42BPG Q6DT37_S1492sS1495s_2_2_1492_1495 Q6DT37 Q6DT37 Serine/threonine-protein kinase MRCK gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16895.16895.3 9.36 9.36 99 2 2 2 0 798.6942 2234.131 S1492s S1495s TMT10 1489 (R) RPAsMGsEGLGGDADPMK (R) RPAS(1.0)MGS(1.0)EGLGGDADPMK K:TMT10,s:Phosphorylated S CDC42BPG 173882.5 2 13 997.1 190.4 HUMAN 1 -7.1085 15.4246 RRPERRHSDPWGRQD-p Q92576;S1898-p RRPERRHSDPWGRQD 0.729507519403757 0.409796310019284 -0.0526666666666667 0.113333333333333 2.60057574201526 5.15435951179587 -0.0526666666666667 0.113333333333333 0.549468026328537 0.305185607715473 -0.638047763153021 1.13203666933097 Q92576 PHF3 Q92576.S1898.p_PHF3 Q92576_S1898s _1_1_1898_1898 Q92576 Q92576|Q92576-2 PHD finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7973.7973.5 20.67 13.71 99 1 1 1 0 569.8768 2765.393 S1898s TMT10 1896 (R) RHsDPWGRQDQQQLDRPFNR (G) RHS(1.0)DPWGRQDQQQLDRPFNR s:Phosphorylated S PHF3 231702.4 3 17 96.1 606.54 HUMAN 1 -2.6006 5.1544 RRPILQLSPPGPRGS-p Q8N3X1-2;S18-p RRPILQLSPPGPRGS 0.476079193431219 0.207217835447598 0.094 0.144666666666667 5.93496825813714 8.99064238445378 0.094 0.144666666666667 0.254978272366991 0.126164090582145 1.27297004719515 1.80609399742438 Q8N3X1 FNBP4 Q8N3X1.2.S18.p_FNBP4 Q8N3X1-2_S18s _1_1_18_18 Q8N3X1-2 Q8N3X1-2 Isoform 2 of Formin-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14259.14670.3 14.68 14.68 99 1 1 1 0 470.9256 1330.7954 S18s Hydrogen 12 (R) RPILQLsPPGPR (G) RPILQLS(1.0)PPGPR s:Phosphorylated S FNBP4 110905.5 23 1 405.1 325.34 HUMAN 1 5.935 8.9906 RRPKHRPSEADEEEL-p O14617-5;S658-p RRPKHRPSEADEEEL 0.981575064370413 0.033005677375021 -0.00366666666666668 0.279333333333333 0.160778460456209 19.978139921841 -0.00366666666666669 0.279333333333333 0.963656275506759 0.0100504615819646 -0.0477132693847828 3.87064366270335 O14617 AP3D1 O14617.5.S658.p_AP3D1 O14617-5_S658s _1_1_658_658 O14617-5 O14617-5 Isoform 5 of AP-3 complex subunit delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4776.4776.2 12.7 8.48 99 1 1 1 0 924.4288 1767.8823 S658s TMT10 655 (K) HRPsEADEEELAR (R) HRPS(1.0)EADEEELAR s:Phosphorylated S AP3D1 137789.5 2 4 513.1 286.98 HUMAN 1 -0.1608 19.9781 RRPKLPQTSDDEKKD-p Q9GZT3;T101-p RRPKLPQTSDDEKKD 0.374752683635426 0.132453744619697 0.225333333333333 0.168 7.89260810676702 11.5714279197123 0.225333333333333 0.168 0.162457284375577 0.0696397507466073 1.61652531395858 2.25546183282669 Q9GZT3 SLIRP Q9GZT3.T101.p_SLIRP Q9GZT3_T101t _1_1_101_101 Q9GZT3 Q9GZT3|Q9GZT3-2 SRA stem-loop-interacting RNA-binding protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9924.9924.3 7.15 3.2 1.199 2 1 1 0 643.3508 1848.0682 T101t TMT10 98 (K) LPQtSDDEKK (D) LPQT(0.99)S(0.0)DDEKK K:TMT10,t:Phosphorylated T SLIRP 12405.8 14 4 2024.1 101.99 HUMAN 1 7.8926 11.5714 RRPLEAGSPGQDLEP-p Q9HCM7;S141-p RRPLEAGSPGQDLEP 0.498857200580771 0.119447273680974 0.138 0.19 5.56519879358565 12.1705725678154 0.138 0.19 0.277638775706051 0.060665634358592 1.2066997169829 2.36142840656093 Q9HCM7 FBRSL1 Q9HCM7.S141.p_FBRSL1 Q9HCM7_S141s _1_1_141_141 Q9HCM7 Q9HCM7|A0A1B0GUN3 Fibrosin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11719.11719.4 15.67 15.67 4.324 4 1 1 0 997.9478 3908.7977 S141s TMT10 121 (R) ESETCPPAEPSENRRPLEAGsPGQDLEPACDGAR (K) ES(0.0)ET(0.0)CPPAEPS(0.0)ENRRPLEAGS(0.99)PGQDLEPACDGAR C:Carbamidomethylation,s:Phosphorylated S FBRSL1 111247 1 3 716.1 237.81 HUMAN 1 5.5652 12.1706 RRPQGGRSMPTTPVL-p Q9Y2L6;S662-p RRPQGGRSMPTTPVL 0.256453406250396 0.0721356909592865 0.226 -0.238666666666667 11.2266927733871 15.1736207647287 0.226 -0.238666666666667 0.0753929475349138 0.0303835086020616 2.19587256221499 -2.90915240882615 Q9Y2L6 FRMD4B Q9Y2L6.S662.p_FRMD4B Q9Y2L6_S662s _1_1_662_662 Q9Y2L6 Q9Y2L6|Q9Y2L6-2|E9PGA7 FERM domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16332.16332.2 8.13 8.13 2.49 4 1 1 0 706.3627 1331.7554 S662s TMT10 662 (R) sMPTTPVLTR (N) S(0.99)MPT(0.0)T(0.0)PVLT(0.0)R s:Phosphorylated S FRMD4B 118900.4 1 3 1893.1 108.71 HUMAN 1 11.2267 -15.1736 RRPQRPRSPPLPAVI-p Q9Y6X9;S615-p RRPQRPRSPPLPAVI 0.183294233804836 0.897116264488935 0.211 0.023 14.487894643968 0.661377147843689 0.211 0.023 0.0355803761942228 0.858741171492881 2.7829457484434 0.186621864219469 Q9Y6X9 MORC2 Q9Y6X9.S615.p_MORC2 Q9Y6X9_S615s _1_1_615_615 Q9Y6X9 Q9Y6X9|Q9Y6X9-2 MORC family CW-type zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7832.7832.4 10.54 10.54 99 1 1 1 0 455.7597 1740.0504 S615s Hydrogen 609 (R) RPQRPRsPPLPAVIR (N) RPQRPRS(1.0)PPLPAVIR s:Phosphorylated S MORC2 118619.8 21 2 309.1 372.4 HUMAN 1 14.4879 0.6614 RRPRHAPSLHGSTEL-p Q9H5N1;S189-p RRPRHAPSLHGSTEL 0.931074993503674 0.167788200693427 0.0173333333333333 0.146 0.614014106343296 10.1985678357829 0.0173333333333333 0.146 0.868157635739755 0.0955307563946312 0.174043072383528 2.01539725431925 Q9H5N1 RABEP2 Q9H5N1.S189.p_RABEP2 Q9H5N1_S189sS193s_2_2_189_193 Q9H5N1 Q9H5N1|Q9H5N1-2|B4DHR0 Rab GTPase-binding effector protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18494.18494.3 7.73 7.73 1.237 4 2 2 0 702.0104 1944.0864 S189s S193s TMT10 186 (R) HAPsLHGsTELLPLSR (D) HAPS(0.99)LHGS(0.99)T(0.0)ELLPLS(0.0)R s:Phosphorylated S RABEP2 63998.1 2 2 4775.1 26.84 HUMAN 1 0.614 10.1986 RRPRRQRSDQDSDSD-p Q6PD62;S1081-p RRPRRQRSDQDSDSD 0.0386603595331013 0.347503208437812 0.644666666666667 -0.109666666666667 32.192606386217 6.08533040470158 0.644666666666667 -0.109666666666667 0.000603586282813353 0.246301444867701 7.12797938079628 -1.29943699568413 Q6PD62 CTR9 Q6PD62.S1081.p_CTR9 Q6PD62_S1081sS1085sS1087s_3_3_1081_1087 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3739.3739.3 9.02 9.02 9.021 4 3 3 0 734.274 1977.9423 Q1079q S1081s S1085s S1087s Hydrogen 1079 (R) qRsDQDsDsDQPSRK (R) Q(1.0)RS(0.99)DQDS(0.99)DS(0.99)DQPS(0.0)RK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S CTR9 134412.8 10 18 152.1 508.81 HUMAN 1 32.1926 -6.0853 RRPSSMYSTGGKRKD-p O75382;S458-p RRPSSMYSTGGKRKD 0.123781235897274 0.362748478687642 0.288666666666667 0.0883333333333334 18.8595008632135 5.83938361092454 0.288666666666667 0.0883333333333334 0.0130031901575039 0.260652346457232 3.63834905000484 1.2556065178629 O75382 TRIM3 O75382.S458.p_TRIM3 O75382_S458s _1_1_458_458 O75382 O75382|O75382-2|A0A1W2PPI7|O75382-3|O75382-4 Tripartite motif-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7297.7297.3 8.2 8.2 1.308 5 1 1 0 570.288 1628.883 S458s TMT10 452 (R) RPSSMYsTGGK (R) RPS(0.0)S(0.0)MY(0.0)S(0.99)T(0.0)GGK K:TMT10,s:Phosphorylated S TRIM3 81912.1 1 5 1265.1 160.44 HUMAN 1 18.8595 5.8394 RRPTPQDSPIFLPVD-p P49327;S1411-p RRPTPQDSPIFLPVD 0.702360190260937 0.0886078805081825 -0.0763333333333334 -0.199333333333333 2.88470671549819 13.9304066218037 -0.0763333333333334 -0.199333333333333 0.514670562187712 0.040453801378636 -0.696896043273446 -2.67855277176931 P49327 FASN P49327.S1411.p_FASN P49327_S1411s _1_1_1411_1411 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23066.23066.3 19.16 15.78 2.595 4 1 1 0 833.084 2417.2662 S1411s TMT10 1405 (R) RPTPQDsPIFLPVDDTSFR (W) RPT(0.0)PQDS(0.99)PIFLPVDDT(0.0)S(0.0)FR s:Phosphorylated S FASN 276046.1 2 15 175.1 481.87 HUMAN 1 -2.8847 -13.9304 RRQAVDVSPLRRVNQ-p M0R0R2;S163-p RRQAVDVSPLRRVNQ 0.128023476673973 0.00827722160832736 -0.359333333333333 -0.491 18.4885140566291 29.6142073763531 -0.359333333333333 -0.491 0.0141627827824513 0.00109289707181788 -3.56181468672541 -6.30577246545974 M0R0R2 NotFound M0R0R2.S163.p_NotFound M0R0R2_S163s _1_1_163_163 M0R0R2 M0R0R2|P46782|M0QZN2 40S ribosomal protein S5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9681.9681.3 8.99 8.99 99 1 1 1 0 483.9311 1369.8113 S163s TMT10 158 (R) QAVDVsPLRR (V) QAVDVS(1.0)PLRR s:Phosphorylated S RPS5 25504 4 3 2365.1 86.45 HUMAN 1 -18.4885 -29.6142 RRQLCPLTPGPGKAL-p O14523;T388-p RRQLCPLTPGPGKAL 0.186994852223034 0.00815813217337322 -0.216666666666667 -0.521666666666667 14.3120609178273 29.7415598650462 -0.216666666666667 -0.521666666666667 0.0370504859250091 0.00106131429414311 -2.75039557747735 -6.34393467596348 O14523 C2CD2L O14523.T388.p_C2CD2L O14523_T388t _1_1_388_388 O14523 O14523|E9PK05 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16184.16184.3 12.58 12.58 99 1 1 1 0 569.3094 1625.9449 T388t TMT10 383 (R) QLCPLtPGPGK (A) QLCPLT(1.0)PGPGK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T C2CD2L 76636.4 1 6 411.1 322.51 HUMAN 1 -14.3121 -29.7416 RRQSQSRSPKRDTTR-p Q99590;S866-p RRQSQSRSPKRDTTR 0.183151029010853 0.517489810177796 0.456333333333333 0.262666666666667 14.4931513683364 3.84234437452138 0.456333333333333 0.262666666666667 0.035537335564148 0.412824594086237 2.78392073115718 0.886725163583884 Q99590 SCAF11 Q99590.S866.p_SCAF11 Q99590_S866s _1_1_866_866 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.0261.0416.3 9.31 5.22 6.992 3 1 1 0 423.8887 1189.6851 S866s Hydrogen 866 (R) sPKRDTTR (E) S(0.99)PKRDT(0.0)T(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S SCAF11 166418 2 20 120.1 549.85 HUMAN 1 14.4932 3.8423 RRQTEPVSPVLKRIK-p Q8IYH5;S113-p RRQTEPVSPVLKRIK 0.158210679187272 0.00187522448824152 -0.250333333333333 -0.868 16.0648179467382 42.8500510666241 -0.250333333333333 -0.868 0.0247467519584286 5.18793938641737e-05 -3.08064591510188 -11.4906497037405 Q8IYH5 ZZZ3 Q8IYH5.S113.p_ZZZ3 Q8IYH5_S113s _1_1_113_113 Q8IYH5 Q8IYH5|Q8IYH5-2|Q8IYH5-4 ZZ-type zinc finger-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15435.15435.2 12.32 12.32 3.39 2 1 1 0 818.4598 1555.946 S113s TMT10 108 (R) QTEPVsPVLK (R) QT(0.0)EPVS(0.99)PVLK K:TMT10,s:Phosphorylated S ZZZ3 103390.7 10 4 1027.1 186.83 HUMAN 1 -16.0648 -42.8501 RRRAMLDSGIYPPGS-p O95295;S126-p RRRAMLDSGIYPPGS 0.10503732738293 0.036903380234195 0.434666666666667 0.266 20.6069588156772 19.2690587386032 0.434666666666667 0.266 0.00869569139375098 0.0118329798818614 4.01043810181175 3.72048860185959 O95295 SNAPIN O95295.S126.p_SNAPIN O95295_S126s _1_1_126_126 O95295 O95295 SNARE-associated protein Snapin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21489.21489.3 20.25 20.25 3.335 3 1 1 0 676.6808 1948.0614 S126s TMT10 122 (R) AMLDsGIYPPGSPGK (-) AMLDS(0.99)GIY(0.0)PPGS(0.0)PGK K:TMT10,s:Phosphorylated S SNAPIN 14930.8 3 3 3118.1 60.29 HUMAN 1 20.607 19.2691 RRRARVGSPSGDAAS-p Q9NP87-3;S12-p RRRARVGSPSGDAAS 0.395179917614244 0.754975517398065 0.122333333333333 0.0546666666666667 7.4417040910411 1.68771513986347 0.122333333333333 0.0546666666666667 0.180231040890194 0.677998114359018 1.5381308952097 0.438429134496583 Q9NP87 POLM Q9NP87.3.S12.p_POLM Q9NP87-3_S12s _1_1_12_12 Q9NP87-3 Q9NP87-3|Q9NP87-2|Q6PIY2|Q9H980|F8WDE4|F8WB78|F8WEJ1 Isoform 3 of DNA-directed DNA/RNA polymerase mu HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4449.4449.2 18.03 18.03 5.106 7 1 1 0 827.3588 1573.7453 S12s Hydrogen 10 (R) VGsPSGDAASSTPPSTR (F) VGS(0.99)PS(0.0)GDAAS(0.0)S(0.0)T(0.0)PPS(0.0)T(0.0)R s:Phosphorylated S POLM 56323.9 6 1 3654.1 46.03 HUMAN 1 7.4417 1.6877 RRRDEQLSPEEEEKR-p P15408;S120-p RRRDEQLSPEEEEKR 0.466414944822307 0.181892466621234 -0.121666666666667 0.244666666666667 6.11474607716148 9.73646685095554 -0.121666666666667 0.244666666666667 0.244638830704277 0.106255963792179 -1.30497896154474 1.93520049074124 P15408 FOSL2 P15408.S120.p_FOSL2 P15408_S120s _1_1_120_120 P15408 P15408|P15408-2|P15408-3 Fos-related antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7661.7661.2 11.3 11.3 99 1 1 1 0 821.3585 1561.7431 S120s Hydrogen 116 (R) DEQLsPEEEEK (R) DEQLS(1.0)PEEEEK K:TMT10-Lys-Only,s:Phosphorylated S FOSL2 35363.9 1 1 2212.1 93.37 HUMAN 1 -6.1147 9.7365 RRREAPGSPPLSPRG-p Q86UU0;S21-p RRREAPGSPPLSPRG 0.591892051068078 0.0247321482775332 0.0793333333333333 0.377 4.1975722083091 21.8620738535019 0.0793333333333333 0.377 0.380401989097415 0.006513173011787 0.954712283681889 4.28596450961849 Q86UU0 BCL9L Q86UU0.S21.p_BCL9L Q86UU0_S21s _1_1_21_21 Q86UU0 Q86UU0|Q86UU0-2|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10772.10978.2 14 14 1.154 2 1 1 0 708.8582 1336.7422 S21s TMT10 17 (R) EAPGsPPLSPR (G) EAPGS(0.99)PPLS(0.0)PR s:Phosphorylated S BCL9L 157526.3 4 1 139.1 524.37 HUMAN 1 4.1976 21.8621 RRRERERSPDSFSMR-p Q92834;S418-p RRRERERSPDSFSMR 0.191102046396083 0.864789497199412 0.247666666666667 -0.0293333333333333 14.0490233839135 0.88987235326175 0.247666666666667 -0.0293333333333334 0.0393638584651426 0.814728229955483 2.7019237118001 -0.245997380726241 Q92834 RPGR Q92834.S418.p_RPGR Q92834_S418s _1_1_418_418 Q92834 Q92834-6|Q92834-2|Q92834-3|Q92834-5 X-linked retinitis pigmentosa GTPase regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7885.7885.3 10.17 10.17 10.169 3 1 1 0 507.564 1440.7103 S418s TMT10 416 (R) ERsPDSFSMR (R) ERS(0.99)PDS(0.0)FS(0.0)MR s:Phosphorylated S RPGR 114411.7 1 1 4792.1 26.55 HUMAN 1 14.049 -0.8899 RRRERRSTVLGLPQH-p Q9P206-3;T173-p RRRERRSTVLGLPQH 0.229800062555284 0.31474284734076 0.201 0.112 12.2746857172906 6.63562171019509 0.201 0.112 0.0592285946848964 0.21698905526851 2.38115306322492 1.39670156871323 Q9P206 KIAA1522 Q9P206.3.T173.p_KIAA1522 Q9P206-3_T173t _1_1_173_173 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10557.10557.4 14.96 14.96 1.187 2 1 1 0 443.7496 1692.0118 T173t Hydrogen 171 (R) RStVLGLPQHVQK (E) RS(0.0)T(0.99)VLGLPQHVQK K:TMT10-Lys-Only,t:Phosphorylated T KIAA1522 108782.6 5 7 62.1 704.36 HUMAN 1 12.2747 6.6356 RRRESEKSLENETLN-p P23588;S445-p RRRESEKSLENETLN 0.0118555182322253 0.0965712209027386 -1.66833333333333 -0.275333333333333 45.9495934117912 13.4237461490087 -1.66833333333333 -0.275333333333333 2.54121060355318e-05 0.0454595764544885 -13.1973450427935 -2.58623682504507 P23588 EIF4B P23588.S445.p_EIF4B P23588_S445s _1_1_445_445 P23588 E7EX17|P23588|P23588-2 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13905.13905.5 18.57 11.62 1.104 5 1 1 0 889.6757 4364.3781 S445s TMT10 445 (K) sLENETLNKEEDCHSPTSKPPKPDQPLK (V) S(0.99)LENET(0.0)LNKEEDCHS(0.0)PT(0.0)S(0.0)KPPKPDQPLK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S EIF4B 69207 6 15 146.1 516.36 HUMAN 1 -45.9496 -13.4237 RRRGDSESEEDEQDS-p Q9NZ63;S17-p RRRGDSESEEDEQDS 0.780774653521955 0.88733109138329 0.0466666666666667 -0.0166666666666666 2.06630296873612 0.730421534959931 0.0466666666666667 -0.0166666666666666 0.621397788243158 0.845196804676879 0.523435750600349 -0.204800320009919 Q9NZ63 C9orf78 Q9NZ63.S17.p_C9orf78 Q9NZ63_S15sS17s_2_2_15_17 Q9NZ63 Q9NZ63 Telomere length and silencing protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18114.18114.5 19.56 19.56 19.556 4 2 2 0 799.5642 3833.8587 S15s S17s Hydrogen 12 (R) RGDsEsEEDEQDSEEVRLKLEETREVQNLR (K) RGDS(0.99)ES(0.99)EEDEQDS(0.0)EEVRLKLEET(0.0)REVQNLR K:TMT10-Lys-Only,s:Phosphorylated S C9orf78 33744.5 15 4 987.1 191.91 HUMAN 1 2.0663 -0.7304 RRRGRSRTPPTSRKR-p Q9UQ35;T1844-p RRRGRSRTPPTSRKR 0.407521297549467 0.7606304389451 0.128333333333333 -0.0303333333333333 7.19867589430412 1.64184342264297 0.128333333333333 -0.0303333333333333 0.190604175598086 0.685197323292922 1.49574752732093 -0.427892487317722 Q9UQ35 SRRM2 Q9UQ35.T1844.p_SRRM2 Q9UQ35_T1844t _1_1_1844_1844 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4422.4422.3 8.06 1.61 1.802 3 1 1 0 417.8961 1171.7109 T1844t Hydrogen 1844 (R) tPPTSRKR (S) T(0.99)PPT(0.0)S(0.0)RKR K:TMT10-Lys-Only,t:Phosphorylated T SRRM2 300351.7 1 117 2.1 3310.34 HUMAN 1 7.1987 -1.6418 RRRIIHGTASYKKER-p Q14244-7;T313-p RRRIIHGTASYKKER 0.673156700289378 0.00575569388165388 0.0576666666666667 -0.700333333333333 3.2204603069791 32.3970354629155 0.0576666666666667 -0.700333333333333 0.476380492752224 0.000575832872424817 0.764845361076804 -7.18330357684397 Q14244 MAP7 Q14244.7.T313.p_MAP7 Q14244-7_T313t _1_1_313_313 Q14244-7 A0A087WZ40|Q14244-7|Q14244-4 Isoform 7 of Ensconsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10198.10198.4 12.24 12.24 2.255 3 1 1 0 472.0283 1805.1252 T313t TMT10 309 (R) IIHGtASYKK (E) IIHGT(0.99)AS(0.0)Y(0.0)KK K:TMT10,t:Phosphorylated T MAP7 87064.8 1 10 581.1 266.4 HUMAN 1 3.2205 -32.397 RRRKAHNSGEDSDLK-p Q9HCS5;S464-p RRRKAHNSGEDSDLK 0.301376256583531 0.0485469522499612 -0.257 0.284333333333333 9.7781540596532 17.5700568847595 -0.257 0.284333333333333 0.105240909838923 0.0174982376893302 -1.94319274387003 3.37309103143374 Q9HCS5 EPB41L4A Q9HCS5.S464.p_EPB41L4A Q9HCS5_S464s _1_1_464_464 Q9HCS5 Q9HCS5 Band 4.1-like protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5633.5633.3 13.11 13.11 4.857 2 1 1 0 570.9414 1630.8437 S464s TMT10 461 (K) AHNsGEDSDLK (Q) AHNS(0.99)GEDS(0.0)DLK K:TMT10,s:Phosphorylated S EPB41L4A 79741.9 2 8 696.1 241.4 HUMAN 1 -9.7782 17.5701 RRRKDDKSPRLPKRR-p Q96JP5;S296-p RRRKDDKSPRLPKRR 0.951494005968289 0.0253160001297539 0.0186666666666667 -0.776 0.427760137767619 21.7292854904955 0.0186666666666667 -0.776 0.906199850557682 0.00671539326759547 0.123458948227939 -4.25586762648945 Q96JP5 ZFP91 Q96JP5.S296.p_ZFP91 Q96JP5_S296s _1_1_296_296 Q96JP5 Q96JP5|Q96JP5-2|H3BTR0 E3 ubiquitin-protein ligase ZFP91 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9529.9529.3 10.52 10.52 99 1 1 1 0 608.3517 1743.0732 S296s TMT10 293 (K) DDKsPRLPK (R) DDKS(1.0)PRLPK K:TMT10,s:Phosphorylated S ZFP91 64299.7 3 4 1081.1 179.92 HUMAN 1 0.4278 -21.7293 RRRPGHGSLTNISRH-p Q7Z6B7;S917-p RRRPGHGSLTNISRH 0.788195837750741 0.642101750329396 0.0556666666666667 -0.0693333333333333 1.99199231534802 2.62183763307981 0.0556666666666667 -0.0693333333333333 0.632121800516313 0.546784552633905 0.507027950161864 -0.642414085120938 Q7Z6B7 SRGAP1 Q7Z6B7.S917.p_SRGAP1 Q7Z6B7_S917s _1_1_917_917 Q7Z6B7 Q7Z6B7|Q7Z6B7-2|G5EA48 SLIT-ROBO Rho GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3542.3542.4 9.49 9.49 1.392 3 1 1 0 440.7375 1679.9615 S917s TMT10 911 (R) RRPGHGsLTNISR (H) RRPGHGS(0.99)LT(0.0)NIS(0.0)R s:Phosphorylated S SRGAP1 125175 3 5 1722.1 119.46 HUMAN 1 1.992 -2.6218 RRRREPESPPASAPI-p Q96AY4;S28-p RRRREPESPPASAPI 0.473939665716417 0.524715537196005 0.11 -0.0643333333333333 5.97111084887548 3.76307855038164 0.11 -0.0643333333333333 0.252865112925095 0.420428496767416 1.27941549436308 -0.871420720761465 Q96AY4 TTC28 Q96AY4.S28.p_TTC28 Q96AY4_S28s _1_1_28_28 Q96AY4 Q96AY4 Tetratricopeptide repeat protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21167.21167.4 22.15 22.15 1.68 3 1 1 0 718.6231 2791.5052 S28s TMT10 23 (R) RREPEsPPASAPIPLFGADTIGQR (S) RREPES(0.99)PPAS(0.0)APIPLFGADT(0.0)IGQR s:Phosphorylated S TTC28 272819.5 9 1 1011.1 188.93 HUMAN 1 5.9711 -3.7631 RRRRFRGSQEDLEAR-p Q9NRR6;S99-p RRRRFRGSQEDLEAR 0.962760324423884 0.0387397913969685 0.0136666666666667 -0.258666666666667 0.319298329104148 18.9577672191671 0.0136666666666667 -0.258666666666667 0.929116488004659 0.0127122749662948 0.0931758717097364 -3.65556444336071 Q9NRR6 INPP5E Q9NRR6.S99.p_INPP5E Q9NRR6_S99s _1_1_99_99 Q9NRR6 Q9NRR6|Q9NRR6-2 72 kDa inositol polyphosphate 5-phosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8636.8636.3 11.77 6.63 99 1 1 1 0 539.5928 1536.7968 S99s TMT10 96 (R) FRGsQEDLEAR (N) FRGS(1.0)QEDLEAR s:Phosphorylated S INPP5E 70888.7 1 2 3349.1 53.19 HUMAN 1 0.3193 -18.9578 RRRRHRHSPTGPPGF-p A0A0A0MR66;S154-p RRRRHRHSPTGPPGF 0.176872821059086 0.170752749769222 0.231 0.155 14.9172216615898 10.0921333280465 0.231 0.155 0.0322313008441455 0.0979008961492599 2.86294039620485 1.99690588691321 A0A0A0MR66 RBM10 A0A0A0MR66.S154.p_RBM10 A0A0A0MR66_S154s _1_1_154_154 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4244.4244.3 16.39 16.39 2.219 2 1 1 0 508.2407 1442.74 S154s Hydrogen 151 (R) HRHsPTGPPGFPR (D) HRHS(0.99)PT(0.0)GPPGFPR s:Phosphorylated S RBM10 110706.4 24 5 270.1 394.36 HUMAN 1 14.9172 10.0921 RRRRPRDSPTLSNSG-p Q9HD20;S899-p RRRRPRDSPTLSNSG 0.490214660431765 0.632340136988952 0.093 -0.065 5.70751455377854 2.70623390530984 0.093 -0.065 0.268688169507731 0.536261488682877 1.23227937737855 -0.659998724110474 Q9HD20 ATP13A1 Q9HD20.S899.p_ATP13A1 Q9HD20_S899s _1_1_899_899 Q9HD20 Q9HD20|Q9HD20-2|Q9HD20-3 Manganese-transporting ATPase 13A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4552.4552.3 12.44 12.44 1.494 4 1 1 0 545.9374 1555.8299 S899s Hydrogen 895 (R) RPRDsPTLSNSGIR (A) RPRDS(0.99)PT(0.0)LS(0.0)NS(0.0)GIR s:Phosphorylated S ATP13A1 134607 10 2 3639.1 46.29 HUMAN 1 5.7075 -2.7062 RRRRREDSYHVRSRS-p P49760;S50-p RRRRREDSYHVRSRS 0.943864818517262 0.680033311159679 0.0113333333333333 0.0396666666666667 0.494526750709015 2.2889120635644 0.0113333333333333 0.0396666666666667 0.892374856088994 0.590348947970823 0.141790722714256 0.571803863907101 P49760 CLK2 P49760.S50.p_CLK2 P49760_S50s _1_1_50_50 P49760 P49760|P49760-3|B1AVT0|P49760-2 Dual specificity protein kinase CLK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5068.5068.2 12.04 5.81 7.37 2 1 1 0 607.7735 1134.5741 S50s TMT10 48 (R) EDsYHVR (S) EDS(0.99)Y(0.0)HVR s:Phosphorylated S CLK2 60545.5 5 2 1587.1 129.39 HUMAN 1 0.4945 2.2889 RRRRRKESFESSPHS-p O95279;S266-p RRRRRKESFESSPHS 0.108078410418423 0.0156968487462265 -0.319 -0.352 20.3459172471776 24.9393019185506 -0.319 -0.352 0.0092343913381314 0.0032067847390747 -3.95358435666384 -5.02217175291146 O95279 KCNK5 O95279.S266.p_KCNK5 O95279_S266s _1_1_266_266 O95279 O95279 Potassium channel subfamily K member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3820.3820.4 9.56 9.56 1.354 4 1 1 0 497.0058 1905.0343 S266s TMT10 263 (R) RKEsFESSPHSR (K) RKES(0.99)FES(0.0)S(0.0)PHS(0.0)R K:TMT10,s:Phosphorylated S KCNK5 55414.2 1 1 5668.1 17.35 HUMAN 1 -20.3459 -24.9393 RRRRRRRTNGWVPVG-p Q8TBE0;T588-p RRRRRRRTNGWVPVG 0.653780563370571 0.00559214187883693 0.0686666666666667 -0.511333333333333 3.46130467888694 32.6394165859583 0.0686666666666667 -0.511333333333333 0.450681293496095 0.000544575804089992 0.812647319992193 -7.26427170738647 Q8TBE0 BAHD1 Q8TBE0.T588.p_BAHD1 Q8TBE0_T588t_1_1_588_588 Q8TBE0 Q8TBE0|Q8TBE0-2|Q8TBE0-3 Bromo adjacent homology domain-containing 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11982.11982.4 18.46 18.46 99 1 1 1 0 560.7909 2159.1908 T588t N589n TMT10 586 (R) RRtnGWVPVGAACEK (A) RRT(1.0)N(1.0)GWVPVGAACEK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,n:Deamidated BAHD1 85848.7 10 8 636.1 256.1 HUMAN 1 3.4613 -32.6394 RRRRRSASPPPATSS-p Q9H7N4;S614-p RRRRRSASPPPATSS 0.864103736661318 0.0827361607772573 0.0253333333333333 0.265666666666667 1.23683112231729 14.3333197052811 0.0253333333333333 0.265666666666667 0.752171524101952 0.0368695663407912 0.332273591151685 2.75262547611376 Q9H7N4 SCAF1 Q9H7N4.S614.p_SCAF1 Q9H7N4_S612sS614s_2_2_612_614 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2807.2807.2 19.99 12.32 19.992 9 2 2 0 783.2977 1405.6554 S612s S614s Hydrogen 612 (R) sAsPPPATSSSSSSR (R) S(0.99)AS(0.99)PPPAT(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)R s:Phosphorylated S SCAF1 139895 7 27 76.1 647.25 HUMAN 1 1.2368 14.3333 RRRRSDPYVKSYLLP-p Q8IYJ3;Y304-p RRRRSDPYVKSYLLP 0.471987673858967 0.611873171315744 0.097 -0.048 6.01451272501431 2.89928573463699 0.097 -0.048 0.250350652408466 0.512945739023028 1.28714851044347 -0.699784451443292 Q8IYJ3 SYTL1 Q8IYJ3.Y304.p_SYTL1 Q8IYJ3_Y304y _1_1_304_304 Q8IYJ3 Q8IYJ3|Q8IYJ3-2|A0A087X1N4 Synaptotagmin-like protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.6735.6812.2 10.38 7.45 10.131 2 1 1 0 701.8783 1322.7833 Y304y TMT10 300 (R) RSDPyVK (S) RS(0.0)DPY(0.99)VK K:TMT10,y:Phosphorylated Y SYTL1 62141.3 4 1 332.1 10.38 HUMAN 1 6.0145 -2.8993 RRRSFSISPSRRSRT-p P18583-5;S1952-p RRRSFSISPSRRSRT 0.351909559122908 0.0138918542029703 0.198666666666667 0.399 8.42764287951498 25.7739456830948 0.198666666666667 0.399 0.14362687524751 0.00264609499716987 1.70927645006444 5.23570205099687 P18583 SON P18583.5.S1952.p_SON P18583-5_S1952s _1_1_1952_1952 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-2|P18583-6 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9686.9686.3 8.5 4.53 1.311 4 1 1 0 449.2333 1265.7164 S1952s TMT10 1948 (R) SFSIsPSRR (S) S(0.0)FS(0.0)IS(0.99)PS(0.0)RR s:Phosphorylated S SON 267429.6 1 31 45.1 778.56 HUMAN 1 8.4276 25.7739 RRRSNRNSIERERRR-p Q8TF01;S601-p RRRSNRNSIERERRR 0.684296974001412 0.163836609584056 -0.110666666666667 0.391666666666667 3.08975231196456 10.3291358935597 -0.110666666666667 0.391666666666667 0.490935874545375 0.0927014251073632 -0.738583786506043 2.03810018786843 Q8TF01 PNISR Q8TF01.S601.p_PNISR Q8TF01_S601s _1_1_601_601 Q8TF01 Q8TF01 Arginine/serine-rich protein PNISR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3654.3654.4 10.77 10.77 10.769 2 1 1 0 393.1978 1489.8033 S601s TMT10 597 (R) SNRNsIERER (R) S(0.0)NRNS(0.99)IERER s:Phosphorylated S PNISR 92575.2 1 5 613.1 261.5 HUMAN 1 -3.0898 10.3291 RRRSRERSKDKDRDR-p P08621;S281-p RRRSRERSKDKDRDR 0.202255091053404 0.361119564775305 1.04266666666667 -0.494 13.4700728848916 5.86900236217332 1.04266666666667 -0.494 0.0449772306586263 0.258880753373815 2.59612661590415 -1.26089824289367 P08621 SNRNP70 P08621.S281.p_SNRNP70 P08621_S281s _1_1_281_281 P08621 P08621|P08621-2|P08621-4 U1 small nuclear ribonucleoprotein 70 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3044.3044.4 8.59 4.85 99 1 1 1 0 390.2092 1477.8487 S281s Hydrogen 281 (R) sKDKDRDR (K) S(1.0)KDKDRDR K:TMT10-Lys-Only,s:Phosphorylated S SNRNP70 51612.9 4 5 607.1 262.24 HUMAN 1 13.4701 -5.869 RRRSRSRSFDYNYRR-p O75494-3;S133-p RRRSRSRSFDYNYRR 0.368060254747326 0.0199156990572054 0.176666666666667 0.340666666666667 8.04783145950503 23.3251908156737 0.176666666666667 0.340666666666667 0.156753358328016 0.00465029943728459 1.64345709936634 4.62644920256912 O75494 SRSF10 O75494.3.S133.p_SRSF10 O75494-3_S133s _1_1_133_133 O75494-3 O75494|O75494-2|O75494-3|O75494-6|O75494-4|Q5JRI1|O75494-5 Isoform 3 of Serine/arginine-rich splicing factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6770.6770.2 13.24 9.55 7.598 3 1 1 0 600.7456 1120.517 S133s Hydrogen 133 (R) sFDYNYRR (S) S(0.99)FDY(0.0)NY(0.0)RR s:Phosphorylated S SRSF10 22336.2 9 14 867.2 210.03 HUMAN 1 8.0478 23.3252 RRRSSRSSPELTRKA-p Q9UQ35;S1694-p RRRSSRSSPELTRKA 0.301607988548506 0.026551938336873 0.155 0.341333333333333 9.76447811006656 21.3914020473382 0.155 0.341333333333333 0.105572836204645 0.0072587158406475 1.94081977904858 4.17986543507564 Q9UQ35 SRRM2 Q9UQ35.S1694.p_SRRM2 Q9UQ35_S1694s _1_1_1694_1694 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4131.4131.3 10.73 2.98 1.566 5 1 1 0 476.9067 1348.7382 S1694s TMT10 1690 (R) SSRSsPELTR (K) S(0.0)S(0.0)RS(0.0)S(0.99)PELT(0.0)R s:Phosphorylated S SRRM2 300351.7 16 113 2.1 3310.34 HUMAN 1 9.7645 21.3914 RRRSSSDTAAYPAGT-p O15047;T224-p RRRSSSDTAAYPAGT 0.148266672319898 0.0480332831393178 0.253 0.281 16.7905893285374 17.6315084688536 0.253 0.281 0.0209382830844582 0.017252385473652 3.22150257490733 3.3853696039495 O15047 SETD1A O15047.T224.p_SETD1A O15047_T224t_1_1_224_224 O15047 O15047 Histone-lysine N-methyltransferase SETD1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9796.9796.4 14.63 14.63 1.703 15 1 1 0 986.9512 3863.8052 T224t N239n TMT10 218 (R) RRSSSDtAAYPAGTTAVGTPGnGTPCSQDTSFSSSR (Q) RRS(0.0)S(0.0)S(0.0)DT(0.99)AAY(0.0)PAGT(0.0)T(0.0)AVGT(0.0)PGN(1.0)GT(0.0)PCS(0.0)QDT(0.0)S(0.0)FS(0.0)S(0.0)S(0.0)R C:Carbamidomethylation,t:Phosphorylated T,n:Deamidated SETD1A 186829.5 1 2 570.2 269.37 HUMAN 1 16.7906 17.6315 RRSASCGSPLSGGAE-p O15211;S622-p RRSASCGSPLSGGAE 0.261326436954116 0.884805253649508 0.172666666666667 0.016 11.0440820666327 0.747734792998389 0.172666666666667 0.016 0.0786306368847875 0.841834113675339 2.16383395073594 0.209325608342507 O15211 RGL2 O15211.S622.p_RGL2 O15211_S622s _1_1_622_622 O15211 O15211 Ral guanine nucleotide dissociation stimulator-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11410.11410.3 20.62 20.62 1.709 9 1 1 0 1133.4618 3318.4073 S622s TMT10 617 (R) SASCGsPLSGGAEEASGGTGYGGEGSGPGASDCR (I) S(0.0)AS(0.0)CGS(0.99)PLS(0.0)GGAEEAS(0.0)GGT(0.0)GY(0.0)GGEGS(0.0)GPGAS(0.0)DCR C:Carbamidomethylation,s:Phosphorylated S RGL2 84061 2 4 1945.1 105.92 HUMAN 1 11.0441 0.7477 RRSASSNSAEAGGDT-p Q9UGU0;S1372-p RRSASSNSAEAGGDT 0.850731297937716 0.842758914018359 0.0323333333333333 0.034 1.35825147560554 1.043773639065 0.0323333333333333 0.034 0.73143350857145 0.786362212793109 0.361475634369313 0.284794607204828 Q9UGU0 TCF20 Q9UGU0.S1372.p_TCF20 Q9UGU0_S1372s _1_1_1372_1372 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.32984.32984.3 14.91 12.49 1.112 7 1 1 0 930.4666 2709.4195 S1372s TMT10 1367 (R) SASSNsAEAGGDTVTLDDILSLK (S) S(0.0)AS(0.0)S(0.0)NS(0.99)AEAGGDT(0.0)VT(0.0)LDDILS(0.0)LK K:TMT10,s:Phosphorylated S TCF20 213250.7 3 22 197.1 457.96 HUMAN 1 1.3583 1.0438 RRSCFESSPDPELKS-p Q9UQ35;S876-p RRSCFESSPDPELKS 0.560135693219576 0.203816100144595 0.0916666666666667 0.125333333333333 4.64343333588471 9.08932803431396 0.0916666666666667 0.125333333333333 0.343286453843749 0.123329564114296 1.03829048124398 1.82316427316426 Q9UQ35 SRRM2 Q9UQ35.S876.p_SRRM2 Q9UQ35_S875sS876s_2_2_875_876 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15832.15832.2 11.98 10.92 3.231 3 2 2 0 892.8576 1624.7726 S875s S876s Hydrogen 871 (R) SCFEssPDPELK (S) S(0.0)CFES(0.99)S(0.99)PDPELK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 8 190 2.1 3310.34 HUMAN 1 4.6434 9.0893 RRSLMSVSGAETVNG-p Q8IUW5;S249-p RRSLMSVSGAETVNG 0.877182701795958 0.0184169942324567 0.0226666666666667 -0.351333333333333 1.11809433570151 23.875692357764 0.0226666666666667 -0.351333333333333 0.773019708195416 0.00409666795008037 0.30324434166681 -4.7589504646766 Q8IUW5 RELL1 Q8IUW5.S249.p_RELL1 Q8IUW5_S249s _1_1_249_249 Q8IUW5 Q8IUW5 RELT-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19707.19707.4 14.95 11.71 1.166 5 1 1 0 692.6176 2687.4802 S249s TMT10 244 (R) SLMSVsGAETVNGEVPATPVKR (E) S(0.0)LMS(0.0)VS(0.99)GAET(0.0)VNGEVPAT(0.0)PVKR K:TMT10,s:Phosphorylated S RELL1 29624.9 1 5 2329.1 87.71 HUMAN 1 1.1181 -23.8757 RRSPGGGSEANGLAL-p O95049-3;S188-p RRSPGGGSEANGLAL 0.840682095696136 0.162825656894658 -0.0305 -0.146 1.4563473318005 10.3640100797739 -0.0305 -0.146 0.715097511660303 0.0919600062306966 -0.384731402362818 -2.04416774825423 O95049 TJP3 O95049.3.S188.p_TJP3 O95049-3_S183sS188s_2_2_183_188 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30691.30691.3 15.94 15.94 9.605 3 2 2 0 756.037 2106.1595 S183s S188s TMT10 183 (R) sPGGGsEANGLALVSGFK (R) S(0.99)PGGGS(0.99)EANGLALVS(0.0)GFK K:TMT10,s:Phosphorylated S TJP3 103593.6 20 25 125.1 544.41 HUMAN 2 -1.4563 -10.364 RRSPSVSSPEPAEKS-p Q9UQ35;S1732-p RRSPSVSSPEPAEKS 0.588586350860677 0.00949153116870816 0.094 1.168 4.24022111052115 28.5432953261761 0.094 1.168 0.376684620510204 0.00139852575085155 0.962778503973867 5.99197766566476 Q9UQ35 SRRM2 Q9UQ35.S1732.p_SRRM2 Q9UQ35_S1731sS1732s_2_2_1731_1732 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8676.8676.3 8.91 8.91 2.555 4 2 2 0 663.6547 1829.0169 S1731s S1732s TMT10 1726 (R) RSPSVssPEPAEK (S) RS(0.0)PS(0.0)VS(0.99)S(0.99)PEPAEK K:TMT10,s:Phosphorylated S SRRM2 300351.7 4 224 2.1 3310.34 HUMAN 1 4.2402 28.5433 RRSRRRRTDEDAVLM-p P51114-2;T511-p RRSRRRRTDEDAVLM 0.0608498573638083 0.013271733212951 -0.473666666666667 -0.441333333333333 26.545222977502 26.1091443028798 -0.473666666666667 -0.441333333333333 0.00221553034259871 0.00244954583209611 -5.44608394943259 -5.32325447990755 P51114 FXR1 P51114.2.T511.p_FXR1 P51114-2_T511t _1_1_511_511 P51114-2 P51114-2|E9PFF5 Isoform 2 of Fragile X mental retardation syndrome-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13595.13595.5 25.71 25.71 16.017 5 1 1 0 773.1791 3781.8962 T511t TMT10 508 (R) RRRtDEDAVLMDGMTESDTASVNENGLGKR (C) RRRT(0.99)DEDAVLMDGMT(0.0)ES(0.0)DT(0.0)AS(0.0)VNENGLGKR K:TMT10,t:Phosphorylated T FXR1 61190.3 4 12 553.2 273.48 HUMAN 1 -26.5452 -26.1091 RRSRSGSSPEVKDKP-p Q9UQ35;S1601-p RRSRSGSSPEVKDKP 0.418116670228811 0.347991046962556 0.168 0.118666666666667 6.98765090548971 6.07723523841265 0.168 0.118666666666667 0.200094388552273 0.246760974205959 1.45885139532669 1.29799821802998 Q9UQ35 SRRM2 Q9UQ35.S1601.p_SRRM2 Q9UQ35_S1598sS1600sS1601s_3_3_1598_1601 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7956.7956.3 9.54 9.54 99 3 3 3 0 662.3037 1744.9958 S1598s S1600s S1601s Hydrogen 1598 (R) sGssPEVKDKPR (A) S(1.0)GS(1.0)S(1.0)PEVKDKPR K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 3 273 2.1 3310.34 HUMAN 1 6.9877 6.0772 RRSRSPYSPVLRRSG-p Q14004-2;S400-p RRSRSPYSPVLRRSG 0.254772818874808 0.0414134903015843 0.175666666666667 0.277 11.2997329482697 18.5366360356617 0.175666666666667 0.277 0.0741355826561058 0.0140067183686785 2.20870567241283 3.56866406887071 Q14004 CDK13 Q14004.2.S400.p_CDK13 Q14004-2_S400s _1_1_400_400 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10595.10595.3 11.25 11.25 2.86 3 1 1 0 461.9161 1303.7684 S400s TMT10 397 (R) SPYsPVLRR (S) S(0.0)PY(0.0)S(0.99)PVLRR s:Phosphorylated S CDK13 159173.6 3 7 145.1 520.12 HUMAN 1 11.2997 18.5366 RRSRSRASPVSRRRS-p Q9UQ35;S1916-p RRSRSRASPVSRRRS 0.0700237545877012 0.148298128846236 0.44 0.218333333333333 24.9117246027215 10.9135508751296 0.44 0.218333333333333 0.00322721232684443 0.0810298271501439 5.0214540206906 2.14001488585744 Q9UQ35 SRRM2 Q9UQ35.S1916.p_SRRM2 Q9UQ35_S1916s _1_1_1916_1916 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3357.3357.3 9.17 9.17 1.353 3 1 1 0 390.2061 1088.6374 S1916s TMT10 1913 (R) SRAsPVSR (R) S(0.0)RAS(0.99)PVS(0.0)R s:Phosphorylated S SRRM2 300351.7 2 123 2.1 3310.34 HUMAN 1 24.9117 10.9136 RRSRSSSSPPPKQKS-p Q9UQ35;S820-p RRSRSSSSPPPKQKS 0.0412311366109555 0.00356137322963082 0.601666666666667 0.908666666666667 30.8795765552325 36.5020802401656 0.601666666666667 0.908666666666667 0.000816661993459339 0.000223764906359382 6.70426505858062 8.66397654676543 Q9UQ35 SRRM2 Q9UQ35.S820.p_SRRM2 Q9UQ35_S820s _1_1_820_820 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5375.5375.2 9.61 9.61 1.346 4 1 1 0 662.8496 1244.7251 S820s TMT10 817 (R) SSSsPPPK (Q) S(0.0)S(0.0)S(0.0)S(0.99)PPPK K:TMT10,s:Phosphorylated S SRRM2 300351.7 1 26 2.1 3310.34 HUMAN 1 30.8796 36.5021 RRSRVTASPGTLRAE-p Q12872-2;S807-p RRSRVTASPGTLRAE 0.533929938978611 0.39746589931695 0.110666666666667 -0.119 5.04610184872761 5.32727087624202 0.110666666666667 -0.119 0.31288865409072 0.293273560900975 1.11249985168885 -1.16345994074953 Q12872 SFSWAP Q12872.2.S807.p_SFSWAP Q12872-2_S807s _1_1_807_807 Q12872-2 Q12872-2 Isoform 2 of Splicing factor, suppressor of white-apricot homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10281.10281.2 10.42 6.08 2.189 3 1 1 0 605.824 1130.6731 S807s TMT10 804 (R) VTAsPGTLR (A) VT(0.0)AS(0.99)PGT(0.0)LR s:Phosphorylated S SFSWAP 110466.6 2 6 485.1 296.41 HUMAN 1 5.0461 -5.3273 RRSSAPFSPPSGPPE-p Q5TZA2;S2009-p RRSSAPFSPPSGPPE 0.443953440113018 0.897193484903589 0.130666666666667 -0.0336666666666667 6.49842384556798 0.660084707283172 0.130666666666667 -0.0336666666666666 0.223953376934509 0.858996766977068 1.37289649847363 -0.186279537556476 Q5TZA2 CROCC Q5TZA2.S2009.p_CROCC Q5TZA2_S2009s _1_1_2009_2009 Q5TZA2 Q5TZA2|Q5TZA2-2 Rootletin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16754.16754.3 14.26 14.26 2.877 4 1 1 0 641.66 1843.0002 S2009s TMT10 2004 (R) SSAPFsPPSGPPEK (-) S(0.0)S(0.0)APFS(0.99)PPS(0.0)GPPEK K:TMT10,s:Phosphorylated S CROCC 228918.7 2 9 912.1 201.7 HUMAN 1 6.4984 -0.6601 RRSSERLSDTPGSFQ-p O75064;S1139-p RRSSERLSDTPGSFQ 0.916056654296661 0.863821531657096 0.0166666666666667 0.019 0.744556569424278 0.897038895348602 0.0166666666666667 0.019 0.842450404319678 0.813384908871508 0.208515768697436 0.247824417591905 O75064 DENND4B O75064.S1139.p_DENND4B O75064_S1139s _1_1_1139_1139 O75064 O75064 DENN domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30287.30287.3 14.93 14.93 1.135 10 1 1 0 1141.543 3342.6507 S1139s TMT10 1134 (R) SSERLsDTPGSFQSPSLEILLSSCSLCR (A) S(0.0)S(0.0)ERLS(0.99)DT(0.0)PGS(0.0)FQS(0.0)PS(0.0)LEILLS(0.0)S(0.0)CS(0.0)LCR C:Carbamidomethylation,s:Phosphorylated S DENND4B 165840.7 2 7 1759.1 117.11 HUMAN 1 0.7446 0.897 RRSSGAGTPRHSPTL-p Q86XN8-3;T510-p RRSSGAGTPRHSPTL 0.879389376158343 0.160373411329136 0.0456666666666667 -0.148333333333333 1.09863321124688 10.4549480980369 0.0456666666666667 -0.148333333333333 0.776491451484689 0.0900544524975667 0.2984397658575 -2.059997258659 Q86XN8 MEX3D Q86XN8.3.T510.p_MEX3D Q86XN8-3_T510tS514s_2_2_510_514 Q86XN8-3 Q86XN8-3|Q86XN8-2 Isoform 3 of RNA-binding protein MEX3D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22235.22235.4 10.17 10.17 1.37 6 2 2 0 736.3612 2782.4959 T510t S514s Hydrogen 505 (R) SSGAGtPRHsPTLPEPGGLRLELPLSR (R) S(0.0)S(0.0)GAGT(0.99)PRHS(0.99)PT(0.0)LPEPGGLRLELPLS(0.0)R t:Phosphorylated T,s:Phosphorylated S MEX3D 67266.1 4 4 2383.1 85.65 HUMAN 1 1.0986 -10.4549 RRSSKSFSLDEPPLF-p Q92576;S682-p RRSSKSFSLDEPPLF 0.114688242267433 0.582023472940159 -0.287 0.0526666666666667 19.5891246402448 3.1722592362858 -0.287 0.0526666666666667 0.0109922737631167 0.481697149542675 -3.79132167543395 0.75507857565341 Q92576 PHF3 Q92576.S682.p_PHF3 Q92576_S682s _1_1_682_682 Q92576 Q92576|Q92576-2|D6R9X2 PHD finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32557.32557.3 16.58 16.58 2.251 3 1 1 0 870.7887 2530.3867 S682s TMT10 680 (K) SFsLDEPPLFIPDNIATIRR (E) S(0.0)FS(0.99)LDEPPLFIPDNIAT(0.0)IRR s:Phosphorylated S PHF3 231702.4 4 5 96.1 606.54 HUMAN 1 -19.5891 3.1723 RRSTRRLYAQAQKLR-p O95049-3;Y744-p RRSTRRLYAQAQKLR 0.918430174900821 0.700851152080925 -0.0176666666666667 -0.126666666666667 0.719029044512204 2.12229332733026 -0.0176666666666667 -0.126666666666667 0.847416850595631 0.6134379887039 -0.201834640315803 -0.535654003984547 O95049 TJP3 O95049.3.Y744.p_TJP3 O95049-3_Y744y _1_1_744_744 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8516.8557.3 7.14 4.03 99 1 1 1 0 505.9536 1435.8786 Y744y TMT10 742 (R) RLyAQAQK (L) RLY(1.0)AQAQK K:TMT10,y:Phosphorylated Y TJP3 103593.6 1 1 446.1 7.14 HUMAN 1 -0.719 -2.1223 RRTAMRVSPHHPAPT-p Q01196-8;S239-p RRTAMRVSPHHPAPT 0.689454359376595 0.306714138912708 0.0603333333333333 -0.138333333333333 3.02784709333086 6.78232192440944 0.0603333333333333 -0.138333333333333 0.497983886903251 0.209781800034556 0.726062703136226 -1.42247257738952 Q01196 RUNX1 Q01196.8.S239.p_RUNX1 Q01196-8_S239s _1_1_239_239 Q01196-8 Q01196|Q01196-11|Q01196-4|Q01196-3|Q01196-7|Q01196-8|Q01196-2|Q01196-10|Q01196-9 Isoform AML-1G of Runt-related transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5421.5421.4 13.02 13.02 1.111 3 1 1 0 544.5266 2095.1181 S239s TMT10 234 (R) TAMRVsPHHPAPTPNPR (A) T(0.0)AMRVS(0.99)PHHPAPT(0.0)PNPR s:Phosphorylated S RUNX1 52102.5 6 3 1762.1 116.8 HUMAN 1 3.0278 -6.7823 RRTDALTSSPGRDLP-p P49736;S40-p RRTDALTSSPGRDLP 0.517913844218022 0.924133970760431 0.113666666666667 0.0133333333333333 5.27787731191168 0.483163732239568 0.113666666666667 0.0133333333333333 0.296628085544975 0.894712751082886 1.15474548158122 0.138674039505645 P49736 MCM2 P49736.S40.p_MCM2 P49736_S40sS41s_2_2_40_41 P49736 P49736|F8WDM3 DNA replication licensing factor MCM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6174.6174.3 7.54 7.54 1.365 4 2 2 0 517.2372 1389.7648 S40s S41s TMT10 34 (R) RTDALTssPGR (D) RT(0.0)DALT(0.0)S(0.99)S(0.99)PGR s:Phosphorylated S MCM2 102579 5 13 259.1 397.63 HUMAN 1 5.2779 0.4832 RRTHSDASDDEAFTT-p Q13017;S1176-p RRTHSDASDDEAFTT 0.0969394664773803 0.0228187423066895 0.363 0.311666666666667 21.5017308422992 22.4140705492257 0.363 0.311666666666667 0.0070766369506043 0.00573578607234611 4.20890842447424 4.41248472449369 Q13017 ARHGAP5 Q13017.S1176.p_ARHGAP5 Q13017_S1176s _1_1_1176_1176 Q13017 Q13017|Q13017-2 Rho GTPase-activating protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9372.9372.3 18.68 17.28 5.569 6 1 1 0 717.3282 2070.0028 S1176s TMT10 1171 (R) THSDAsDDEAFTTSK (T) T(0.0)HS(0.0)DAS(0.99)DDEAFT(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ARHGAP5 173940.2 4 9 639.1 255.25 HUMAN 1 21.5017 22.4141 RRTHSEGSLLQEPRG-p P49796;S946-p RRTHSEGSLLQEPRG 0.201297381037897 0.299989237307142 0.446666666666667 -0.278333333333333 13.5247488070816 6.90218528986465 0.446666666666667 -0.278333333333333 0.044414534968189 0.204071083816328 2.60606776254265 -1.44348693931524 P49796 RGS3 P49796.S946.p_RGS3 P49796_S943sS946s_2_2_943_946 P49796 P49796|P49796-6|P49796-4|P49796-1 Regulator of G-protein signaling 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11676.11676.3 9.14 9.14 2.249 3 2 2 0 581.5954 1582.8387 S943s S946s TMT10 941 (R) THsEGsLLQEPR (G) T(0.0)HS(0.99)EGS(0.99)LLQEPR s:Phosphorylated S RGS3 134216.1 3 12 1029.1 186.27 HUMAN 1 13.5247 -6.9022 RRTIEGQSPEPVFGD-p Q9Y2I9;S800-p RRTIEGQSPEPVFGD 0.630331817286583 0.137869498250327 -0.064 -0.159 3.72913723390031 11.3388791955065 -0.064 -0.159 0.423727134997701 0.0734703452118454 -0.864986409086289 -2.2145540072245 Q9Y2I9 TBC1D30 Q9Y2I9.S800.p_TBC1D30 Q9Y2I9_S800s _1_1_800_800 Q9Y2I9 Q9Y2I9|Q9Y2I9-2|F8VZ81 TBC1 domain family member 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24995.24995.3 21.36 21.36 3.697 3 1 1 0 999.8342 2917.5195 S800s TMT10 795 (R) TIEGQsPEPVFGDADVDVSAVQAK (L) T(0.0)IEGQS(0.99)PEPVFGDADVDVS(0.0)AVQAK K:TMT10,s:Phosphorylated S TBC1D30 103654.4 6 15 283.1 386.67 HUMAN 1 -3.7291 -11.3389 RRTIILGSGHKGKAT-p Q5JTW2-2;S346-p RRTIILGSGHKGKAT 0.84768925371821 0.00188082223295555 0.0276666666666667 -0.966 1.38896891129086 42.816114850542 0.0276666666666667 -0.966 0.726278367762065 5.22863727834829e-05 0.368789395936169 -11.4735158611421 Q5JTW2 CEP78 Q5JTW2.2.S346.p_CEP78 Q5JTW2-2_S346s _1_1_346_346 Q5JTW2-2 Q5JTW2-2|Q5JTW2-5|Q5JTW2-3|A8MST6 Isoform 2 of Centrosomal protein of 78 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13731.13731.3 11.41 11.41 5.696 2 1 1 0 488.6175 1383.8724 S346s TMT10 341 (R) TIILGsGHK (G) T(0.0)IILGS(0.99)GHK K:TMT10,s:Phosphorylated S CEP78 80985 1 3 2272.1 90.44 HUMAN 1 1.389 -42.8161 RRTKSKGSLEITESQ-p Q9C0B5;S299-p RRTKSKGSLEITESQ 0.915262614364166 0.691045226554522 -0.0186666666666667 0.0423333333333334 0.753108942326892 2.20065929257209 -0.0186666666666667 0.0423333333333334 0.840793035698547 0.602468119817332 -0.210747769011457 0.552728168590052 Q9C0B5 ZDHHC5 Q9C0B5.S299.p_ZDHHC5 Q9C0B5_S296sS299s_2_2_296_299 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18176.18176.5 21.71 18.24 2.37 6 2 2 0 736.9753 3520.9102 S296s S299s TMT10 296 (K) sKGsLEITESQSADAEPPPPPKPDLSR (Y) S(0.99)KGS(0.99)LEIT(0.0)ES(0.0)QS(0.0)ADAEPPPPPKPDLS(0.0)R K:TMT10,s:Phosphorylated S ZDHHC5 78285 8 26 134.1 530.74 HUMAN 1 -0.7531 2.2007 RRTKTEISEMNRNIS-p P05787;S308-p RRTKTEISEMNRNIS 0.456417468206896 0.0183385960938542 -0.169 0.769 6.27776816179685 23.9023518834245 -0.169 0.769 0.235625985413439 0.00407159724336062 -1.33389855889575 4.76543063180056 P05787 KRT8 P05787.S308.p_KRT8 P05787_S308s _1_1_308_308 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8905.8905.3 8.87 8.87 2.732 3 1 1 0 582.9668 1666.9198 S308s TMT10 303 (R) TKTEIsEMNR (N) T(0.0)KT(0.0)EIS(0.99)EMNR K:TMT10,s:Phosphorylated S KRT8 53703.3 1 24 69.1 672.47 HUMAN 1 -6.2778 23.9024 RRTSEEDTPKKKKHK-p A0A1B0GW41;T154-p RRTSEEDTPKKKKHK 0.103499370858852 0.00137406073843988 0.354333333333333 -1.053 20.798450833875 46.5002701209471 0.354333333333333 -1.053 0.00832060521385245 2.23858189971231e-05 4.05244063747385 -13.4804819888903 A0A1B0GW41 NotFound A0A1B0GW41.T154.p_NotFound A0A1B0GW41_T154t _1_1_154_154 A0A1B0GW41 A0A1B0GW41 Inhibitor of growth protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5608.5608.3 9.77 5.96 2.097 3 1 1 0 601.3245 1721.9888 T154t TMT10 149 (R) TSEEDtPKK (K) T(0.0)S(0.0)EEDT(0.99)PKK K:TMT10,t:Phosphorylated T ING5 28803.1 1 4 2243.1 92 HUMAN 1 20.7985 -46.5003 RRVESEESGDEEGKK-p Q15435;S27-p RRVESEESGDEEGKK 0.545021211681862 0.0644373724837148 -0.209 0.441333333333333 4.86655100237226 15.8549824916535 -0.209 0.441333333333333 0.326095570597838 0.0259717821176403 -1.07954518420333 3.03827189808466 Q15435 PPP1R7 Q15435.S27.p_PPP1R7 Q15435_S27s _1_1_27_27 Q15435 Q15435 Protein phosphatase 1 regulatory subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13180.13180.4 16.84 12.2 3.402 3 1 1 0 916.6633 3583.6641 S27s TMT10 6 (R) GAGQQQSQEMMEVDRRVESEEsGDEEGK (K) GAGQQQS(0.0)QEMMEVDRRVES(0.0)EES(0.99)GDEEGK K:TMT10,s:Phosphorylated S PPP1R7 41677.6 4 3 1222.1 164.72 HUMAN 1 -4.8666 15.855 RRVFIMDSCDELIPE-p P08238;S365-p RRVFIMDSCDELIPE 0.580949089819777 0.242888583022494 0.0766666666666667 0.118666666666667 4.33866397611704 8.09786441287936 0.0766666666666666 0.118666666666667 0.368242238899162 0.154957841680254 0.981336853382729 1.65160306616545 P08238 HSP90AB1 P08238.S365.p_HSP90AB1 P08238_S365s _1_1_365_365 P08238 P08238 Heat shock protein HSP 90-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.37191.37191.3 17.97 15.89 9.253 2 1 1 0 895.0947 2603.3087 S365s TMT10 360 (R) VFIMDsCDELIPEYLNFIR (G) VFIMDS(0.99)CDELIPEY(0.0)LNFIR C:Carbamidomethylation,s:Phosphorylated S HSP90AB1 83605 1 30 43.2 810.87 HUMAN 1 4.3387 8.0979 RRVKSPGSGHVKQKA-p Q9C040-2;S470-p RRVKSPGSGHVKQKA 0.33192913029798 0.175547954428537 0.149333333333333 0.165666666666667 8.94495796333654 9.93731488696153 0.149333333333333 0.165666666666667 0.127498244082084 0.101453845068421 1.79883469453733 1.97003089138207 Q9C040 TRIM2 Q9C040.2.S470.p_TRIM2 Q9C040-2_S470s _1_1_470_470 Q9C040-2 Q9C040-2|A0A0J9YX34 Isoform 2 of Tripartite motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5745.5745.4 9.39 9.39 2.277 2 1 1 0 441.5098 1683.0521 S470s TMT10 465 (R) VKSPGsGHVK (Q) VKS(0.0)PGS(0.99)GHVK K:TMT10,s:Phosphorylated S TRIM2 85627.1 3 3 2827.1 69.05 HUMAN 1 8.945 9.9373 RRVQPQWSPPAGTQP-p P49589-3;S102-p RRVQPQWSPPAGTQP 0.49943620222942 0.168285387501699 0.097 -0.143 5.55756417852419 10.1796872315389 0.097 -0.143 0.278127275900313 0.0959469727734518 1.20532471539423 -2.01211607066788 P49589 CARS P49589.3.S102.p_CARS P49589-3_S102s _1_1_102_102 P49589-3 P49589-3|B4DKY1|P49589-2|E9PLP0|E9PRS8|C9JLN0 Isoform 3 of Cysteine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11894.11894.3 14.08 14.08 6.72 2 1 1 0 725.3547 2094.0864 S102s TMT10 96 (R) RVQPQWsPPAGTQPCR (L) RVQPQWS(0.99)PPAGT(0.0)QPCR C:Carbamidomethylation,s:Phosphorylated S CARS 95434.6 5 2 2202.1 93.6 HUMAN 1 5.5576 -10.1797 RRVSGNNSPSLSNGG-p Q96J02;S240-p RRVSGNNSPSLSNGG 0.51428507339171 0.132289051630432 0.0896666666666667 -0.159333333333333 5.33195022944616 11.580836185326 0.0896666666666667 -0.159333333333333 0.292957740280811 0.0694890511331853 1.1645567605122 -2.25711930612082 Q96J02 ITCH Q96J02.S240.p_ITCH Q96J02_S240s_1_1_240_240 Q96J02 Q96J02|Q96J02-2|Q96J02-3 E3 ubiquitin-protein ligase Itchy homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9918.9918.5 18.38 18.38 2.405 7 1 1 0 756.2014 3696.0247 S240s N245n TMT10 235 (R) VSGNNsPSLSnGGFKPSRPPRPSRPPPPTPR (R) VS(0.0)GN(0.0)N(0.0)S(0.99)PS(0.0)LS(0.0)N(0.99)GGFKPS(0.0)RPPRPS(0.0)RPPPPT(0.0)PR K:TMT10,s:Phosphorylated S,n:Deamidated ITCH 103656.7 22 6 2298.1 89.16 HUMAN 1 5.332 -11.5808 RRVSSSRSVSGSPEP-p A9Z1X7;S761-p RRVSSSRSVSGSPEP 0.864973205117234 0.120297291769479 0.0306666666666667 0.204 1.22458147703198 12.1267503457559 0.0306666666666667 0.204 0.754296082708134 0.0612808760829148 0.329300872368741 2.35364791859969 A9Z1X7 NotFound A9Z1X7.S761.p_NotFound A9Z1X7_S761sS763sS765s_3_3_761_765 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7669.7669.2 8.16 8.16 99 3 3 3 0 749.797 1258.684 S761s S763s S765s Hydrogen 761 (R) sVsGsPEPAAK (K) S(1.0)VS(1.0)GS(1.0)PEPAAK K:TMT10-Lys-Only,s:Phosphorylated S SRRM1 103445.7 23 82 8.1 1346.57 HUMAN 1 1.2246 12.1268 RRVTQHESDNENEIQ-p Q5VZL5;S122-p RRVTQHESDNENEIQ 0.767296234797179 0.259163724943929 -0.041 0.113 2.20354247177108 7.72480671360307 -0.041 0.113 0.60206828809797 0.168857100908159 -0.553420608788475 1.58689760678344 Q5VZL5 ZMYM4 Q5VZL5.S122.p_ZMYM4 Q5VZL5_S122s _1_1_122_122 Q5VZL5 Q5VZL5|Q5VZL5-4|Q5VZL5-2 Zinc finger MYM-type protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11318.11318.3 19.45 19.45 6.039 2 1 1 0 855.4186 2484.2731 S122s TMT10 117 (R) VTQHEsDNENEIQIQNK (L) VT(0.0)QHES(0.99)DNENEIQIQNK K:TMT10,s:Phosphorylated S ZMYM4 176265.3 10 1 535.1 278.69 HUMAN 1 -2.2035 7.7248 RRWLDGASFDNERGS-p O95071;S327-p RRWLDGASFDNERGS 0.938814714787851 0.0155266563439339 -0.0116666666666667 0.355333333333333 0.535839580203617 25.0079318861788 -0.0116666666666667 0.355333333333333 0.8839262716255 0.00315650739690028 -0.153020732767224 5.039493436081 O95071 UBR5 O95071.S327.p_UBR5 O95071_S327s _1_1_327_327 O95071 O95071|O95071-2|E7EMW7 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18212.18212.3 14.53 11.93 5.694 4 1 1 0 770.0394 2228.1348 S327s TMT10 322 (R) WLDGAsFDNERGSTSK (E) WLDGAS(0.99)FDNERGS(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S UBR5 312542 7 7 80.1 636.57 HUMAN 1 -0.5358 25.0079 RRWSDQLSLDEKDGF-p Q8IZQ1;S3339-p RRWSDQLSLDEKDGF 0.512325875114465 0.119464099601837 -0.281333333333333 0.36 5.36843368850529 12.1673813979387 -0.281333333333333 0.36 0.290507019814615 0.060710227485235 -1.17116743329239 2.36086165726374 Q8IZQ1 WDFY3 Q8IZQ1.S3339.p_WDFY3 Q8IZQ1_S3339s _1_1_3339_3339 Q8IZQ1 Q8IZQ1|Q8IZQ1-2 WD repeat and FYVE domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21336.21336.2 13.38 9.14 5.531 2 1 1 0 879.9397 1678.9052 S3339s TMT10 3334 (R) WSDQLsLDEK (D) WS(0.0)DQLS(0.99)LDEK K:TMT10,s:Phosphorylated S WDFY3 399758.5 3 8 977.1 192.72 HUMAN 1 -5.3684 12.1674 RRYGKAGSPETKWID-p Q8WWI1-3;S795-p RRYGKAGSPETKWID 0.0768338580443976 0.0275163694325009 0.993666666666667 -0.676 23.8555508515036 21.1623809449507 0.993666666666667 -0.676 0.00411571141030296 0.00765176996745479 4.75964125708125 -4.12881697048141 Q8WWI1 LMO7 Q8WWI1.3.S795.p_LMO7 Q8WWI1-3_S795s _1_1_795_795 Q8WWI1-3 Q8WWI1|Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4736.4736.3 15.39 15.39 6.044 3 1 1 0 525.9445 1495.8521 S795s Hydrogen 790 (R) YGKAGsPETK (W) Y(0.0)GKAGS(0.99)PET(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S LMO7 154694.3 5 21 61.1 704.74 HUMAN 1 23.8556 -21.1624 RRYNQRISLAIPNLG-p Q15018;S159-p RRYNQRISLAIPNLG 0.94478758147709 0.394698858261189 -0.011 -0.0813333333333333 0.488207084773613 5.36668349784599 -0.011 -0.0813333333333333 0.893674346732399 0.290624116659671 -0.140065329343797 -1.17059890189692 Q15018 FAM175B Q15018.S159.p_FAM175B Q15018_S159s _1_1_159_159 Q15018 Q15018 BRISC complex subunit Abraxas 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23500.23500.4 13.05 13.05 5.39 5 1 1 0 744.6406 2895.5729 S159s TMT10 154 (R) YNQRIsLAIPNLGNTSQQEYK (V) Y(0.0)NQRIS(0.99)LAIPNLGNT(0.0)S(0.0)QQEY(0.0)K K:TMT10,s:Phosphorylated S ABRAXAS2 47128.2 2 2 3052.1 62.08 HUMAN 1 -0.4882 -5.3667 RSAAASNYV______-p O14493;Y208-p RSAAASNYV______ 0.253422222265936 0.151689811407285 0.165 -0.169 11.3649917743474 10.7681019163662 0.165 -0.169 0.0730299196078091 0.0837895404223603 2.22018082926941 -2.11460027928966 O14493 CLDN4 O14493.Y208.p_CLDN4 O14493_Y208y _1_1_208_208 O14493 O14493 Claudin-4 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.9653.10392.2 12.17 12.17 12.167 3 1 1 0 546.2516 1011.5308 Y208y TMT10 202 (R) SAAASNyV (-) S(0.0)AAAS(0.0)NY(0.99)V y:Phosphorylated Y CLDN4 22590.4 3 1 292.1 12.17 HUMAN 1 11.365 -10.7681 RSAPGGGSKVPQKKV-p P06748;S149-p RSAPGGGSKVPQKKV 0.35152970692666 0.00710721031446719 0.148 -0.587333333333333 8.43557494044348 30.7755712514429 0.148 -0.587333333333334 0.143364791011493 0.000836455564913779 1.71065015572919 -6.66068906378785 P06748 NPM1 P06748.S149.p_NPM1 P06748_S149s _1_1_149_149 P06748 P06748|P06748-2|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8800.8800.4 8.39 5.81 4.056 2 1 1 0 470.7717 1800.0946 S149s TMT10 143 (R) SAPGGGsKVPQK (K) S(0.0)APGGGS(0.99)KVPQK K:TMT10,s:Phosphorylated S NPM1 32745.6 2 11 78.1 640.75 HUMAN 1 8.4356 -30.7756 RSAPTAPTPPPPPPP-p A6NHB5;T819-p RSAPTAPTPPPPPPP 0.882720709020121 0.89520259237886 0.0226666666666667 0.015 1.0685213971728 0.674832411002465 0.0226666666666667 0.015 0.781893963586523 0.856084746359559 0.290979070731631 0.190181226996628 A6NHB5 NotFound A6NHB5.T819.p_NotFound A6NHB5_T819t _1_1_819_819 A6NHB5 A6NHB5|Q14202|Q14202-2|A6NHN7 Zinc finger MYM-type protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11804.11804.3 19.67 19.67 3.567 4 1 1 0 805.7793 2335.3538 T819t TMT10 813 (R) SAPTAPtPPPPPPPATPRK (N) S(0.0)APT(0.0)APT(0.99)PPPPPPPAT(0.0)PRK K:TMT10,t:Phosphorylated T ZMYM3 156426.3 6 10 331.1 357.99 HUMAN 1 1.0685 0.6748 RSARRRTTQIINITM-p Q14980;T1812-p RSARRRTTQIINITM 0.892228666049809 0.13016385753973 0.0213333333333333 -0.202666666666667 0.968664684278285 11.6701367145185 0.0213333333333333 -0.202666666666667 0.800080216102421 0.0680747928628652 0.265999717880285 -2.27286140771806 Q14980 NUMA1 Q14980.T1812.p_NUMA1 Q14980_T1811tT1812t_2_2_1811_1812 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17914.17914.3 10.82 10.82 10.818 4 2 2 0 732.0593 2034.2258 T1811t T1812t TMT10 1809 (R) RRttQIINITMTK (K) RRT(0.99)T(0.99)QIINIT(0.0)MT(0.0)K K:TMT10,t:Phosphorylated T NUMA1 239339.3 1 45 31.1 900.97 HUMAN 1 0.9687 -11.6701 RSASRSGSAHGSGKS-p P62995;S22-p RSASRSGSAHGSGKS 0.19519838261091 0.00873264486200055 -0.333666666666667 -0.424666666666667 13.8376659784724 29.19237394643 -0.333666666666667 -0.424666666666667 0.0413269545075029 0.00120437742197636 -2.66316180628048 -6.18066446488072 P62995 TRA2B P62995.S22.p_TRA2B P62995_S22s _1_1_22_22 P62995 P62995 Transformer-2 protein homolog beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3000.3000.2 10.34 10.34 2.073 3 1 1 0 663.3344 1245.6952 S22s TMT10 20 (R) SGsAHGSGK (S) S(0.0)GS(0.99)AHGS(0.0)GK K:TMT10,s:Phosphorylated S TRA2B 33779.2 1 99 8.3 1346.57 HUMAN 1 -13.8377 -29.1924 RSATTTGSPGTEKAR-p Q6GYQ0-2;S740-p RSATTTGSPGTEKAR 0.132826527475612 0.774129165859027 0.305333333333333 0.037 18.0917420351212 1.53744768005167 0.305333333333333 0.037 0.0155176444381841 0.701867660219101 3.48085593237046 0.403698929618109 Q6GYQ0 RALGAPA1 Q6GYQ0.2.S740.p_RALGAPA1 Q6GYQ0-2_S740s _1_1_740_740 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7|Q6GYQ0-4|Q6GYQ0-3 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6110.6110.2 14.67 10.88 1.112 6 1 1 0 837.9216 1594.8688 S740s TMT10 734 (R) SATTTGsPGTEK (A) S(0.0)AT(0.0)T(0.0)T(0.0)GS(0.99)PGT(0.0)EK K:TMT10,s:Phosphorylated S RALGAPA1 236609.9 6 9 317.1 366.49 HUMAN 1 18.0917 1.5374 RSAVRPASLNLNRSR-p Q96N67-6;S888-p RSAVRPASLNLNRSR 0.0591308077305013 0.0186372710405204 -0.489666666666667 -0.453 26.8509560193469 23.8029822386817 -0.489666666666667 -0.453 0.00206492555043189 0.00416583223432666 -5.52836558353268 -4.74130677691535 Q96N67 DOCK7 Q96N67.6.S888.p_DOCK7 Q96N67-6_S888s _1_1_888_888 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10989.10989.3 11.54 11.54 4.132 2 1 1 0 536.2933 1526.8964 S888s TMT10 882 (R) SAVRPAsLNLNR (S) S(0.0)AVRPAS(0.99)LNLNR s:Phosphorylated S DOCK7 243551.1 2 13 345.1 352.4 HUMAN 1 -26.851 -23.803 RSAYKRLSTIFEECD-p Q5T5P2;S1461-p RSAYKRLSTIFEECD 0.863512578300451 0.0862549088207715 0.027 0.229333333333333 1.24291850532606 14.0888217629895 0.027 0.229333333333333 0.751117965079587 0.0390047791937452 0.333749012670927 2.70760418826132 Q5T5P2 KIAA1217 Q5T5P2.S1461.p_KIAA1217 Q5T5P2_S1461s _1_1_1461_1461 Q5T5P2 Q5T5P2|Q5T5P2-3 Sickle tail protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23293.23293.3 11.94 11.94 1.159 2 1 1 0 745.6784 2155.0539 S1461s TMT10 1459 (K) RLsTIFEECDEELER (M) RLS(0.99)T(0.0)IFEECDEELER C:Carbamidomethylation,s:Phosphorylated S KIAA1217 214739.6 4 13 303.1 376.04 HUMAN 1 1.2429 14.0888 RSCDEPLTPPPHSPT-p Q9Y2K7;T713-p RSCDEPLTPPPHSPT 0.787952750145453 0.758652181828998 -0.0683333333333333 0.0333333333333333 1.99543858790524 1.65636466816538 -0.0683333333333333 0.0333333333333333 0.631620389609409 0.68291009584091 -0.507791645908101 0.431234081945991 Q9Y2K7 KDM2A Q9Y2K7.T713.p_KDM2A Q9Y2K7_T713t _1_1_713_713 Q9Y2K7 Q9Y2K7|I3VM54|Q9Y2K7-2|Q9Y2K7-3 Lysine-specific demethylase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24797.24797.4 17.56 17.56 3.953 6 1 1 0 830.1525 3237.6234 T713t TMT10 707 (R) SCDEPLtPPPHSPTSMLQLIHDPVSPR (G) S(0.0)CDEPLT(0.99)PPPHS(0.0)PT(0.0)S(0.0)MLQLIHDPVS(0.0)PR C:Carbamidomethylation,t:Phosphorylated T KDM2A 135243.8 1 9 409.1 323.7 HUMAN 1 -1.9954 1.6564 RSCLAKGSPERHHKQ-p A0A0G2JHC2;S530-p RSCLAKGSPERHHKQ 0.201147832961288 0.0134291665885687 0.7 -0.897666666666667 13.5338116532926 26.0344916379102 0.7 -0.897666666666667 0.0443219474687733 0.00249201605636638 2.60771655051016 -5.30366462423473 A0A0G2JHC2 NotFound A0A0G2JHC2.S530.p_NotFound A0A0G2JHC2_S530s _1_1_530_530 A0A0G2JHC2 Q6NYC8|A0A0G2JHC2|Q6NYC8-3|Q6NYC8-4 PPP1R18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.6355.6355.2 11.64 5.78 5.696 2 1 1 0 821.9218 1562.8725 S530s TMT10 524 (R) SCLAKGsPER (H) S(0.0)CLAKGS(0.99)PER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PPP1R18 68325.8 5 9 1213.1 166.15 HUMAN 1 13.5338 -26.0345 RSCMLTGTPESVQSA-p Q96AE4;T153-p RSCMLTGTPESVQSA 0.537563738449042 0.0149453165098355 0.0826666666666667 0.418333333333333 4.98316347289584 25.2662100873508 0.0826666666666667 0.418333333333333 0.317456082559454 0.00297426041658135 1.10097180739364 5.1050567503497 Q96AE4 FUBP1 Q96AE4.T153.p_FUBP1 Q96AE4_T153t _1_1_153_153 Q96AE4 E9PEB5|Q96AE4-2 Far upstream element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15471.15471.2 17.7 15.03 1.933 5 1 1 0 1067.52 2054.0662 T153t TMT10 147 (R) SCMLTGtPESVQSAK (R) S(0.0)CMLT(0.0)GT(0.99)PES(0.0)VQS(0.0)AK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T FUBP1 67730.3 10 6 1157.1 171.64 HUMAN 1 4.9832 25.2662 RSCQRSDSDAEAQGK-p Q13131-2;S523-p RSCQRSDSDAEAQGK 0.97481484113528 0.461641787037362 -0.0143333333333333 0.445333333333333 0.216508619990947 4.47688987349674 -0.0143333333333333 0.445333333333333 0.951369311084673 0.356706491302905 -0.0638667190535174 1.0070726938123 Q13131 PRKAA1 Q13131.2.S523.p_PRKAA1 Q13131-2_S523s _1_1_523_523 Q13131-2 Q13131-2 Isoform 2 of 5'-AMP-activated protein kinase catalytic subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4107.4107.3 14.65 14.65 1.637 3 1 1 0 692.9856 1996.9758 S523s TMT10 517 (R) SCQRSDsDAEAQGK (S) S(0.0)CQRS(0.0)DS(0.99)DAEAQGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRKAA1 66149.4 2 9 1453.1 140.73 HUMAN 1 -0.2165 4.4769 RSCRGRESDEDTEDA-p Q9H7L9;S45-p RSCRGRESDEDTEDA 0.80012376994327 0.00385233994224125 -0.0816666666666667 0.718333333333333 1.86684305115259 35.7087279279767 -0.0816666666666667 0.718333333333333 0.650602450742298 0.000268613111277236 -0.479107296316279 8.35881551234691 Q9H7L9 SUDS3 Q9H7L9.S45.p_SUDS3 Q9H7L9_S45s _1_1_45_45 Q9H7L9 Q9H7L9 Sin3 histone deacetylase corepressor complex component SDS3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15226.15226.5 21.36 20.27 1.306 5 1 1 0 802.9637 3930.8278 S45s TMT10 42 (R) GREsDEDTEDASETDLAKHDEEDYVEMK (E) GRES(0.99)DEDT(0.0)EDAS(0.0)ET(0.0)DLAKHDEEDY(0.0)VEMK K:TMT10,s:Phosphorylated S SUDS3 38249.6 1 2 1096.1 178.23 HUMAN 1 -1.8668 35.7087 RSDAGLESDTAMKKG-p Q9NR30;S13-p RSDAGLESDTAMKKG 0.54675450438427 0.00385233994224125 0.113666666666667 -0.647 4.84152772071456 35.7160288887422 0.113666666666667 -0.647 0.32797989910135 0.000268161922889552 1.07493560243774 -8.36158016421889 Q9NR30 DDX21 Q9NR30.S13.p_DDX21 Q9NR30_S13s _1_1_13_13 Q9NR30 Q9NR30 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13227.13227.5 15.55 12.37 4.447 4 1 1 0 607.5374 2953.6798 S13s TMT10 7 (R) SDAGLEsDTAMKKGETLRK (Q) S(0.0)DAGLES(0.99)DT(0.0)AMKKGET(0.0)LRK K:TMT10,s:Phosphorylated S DDX21 87856.3 21 13 103.1 590.75 HUMAN 1 4.8415 -35.716 RSDDDDRSSDRKDGV-p Q09161;S680-p RSDDDDRSSDRKDGV 0.510576045070076 0.563392974355581 -0.123333333333333 0.0913333333333334 5.3951002363829 3.35788851361427 -0.123333333333333 0.0913333333333333 0.288728713902394 0.461541916026036 -1.17599476848303 0.792092545942751 Q09161 NCBP1 Q09161.S680.p_NCBP1 Q09161_S680s _1_1_680_680 Q09161 Q09161 Nuclear cap-binding protein subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9599.9599.4 15.99 15.99 1.125 3 1 1 0 694.0685 2693.2812 S680s Hydrogen 674 (R) SDDDDRsSDRKDGVLEEQIER (L) S(0.0)DDDDRS(0.99)S(0.0)DRKDGVLEEQIER K:TMT10-Lys-Only,s:Phosphorylated S NCBP1 92921.8 1 4 1603.1 128.33 HUMAN 1 -5.3951 3.3579 RSDEGQLSPATRGAY-p Q15149;S720-p RSDEGQLSPATRGAY 0.0756084078669892 0.0373272768948999 -0.465 0.526666666666667 24.0047274842673 19.1873575064594 -0.465 0.526666666666667 0.00397674049366987 0.0120576937558039 -4.79604144996663 3.70339104829455 Q15149 PLEC Q15149.S720.p_PLEC Q15149_S720s _1_1_720_720 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6690.6690.2 14.51 11.31 2.361 3 1 1 0 735.3458 1389.7171 S720s TMT10 714 (R) SDEGQLsPATR (G) S(0.0)DEGQLS(0.99)PAT(0.0)R s:Phosphorylated S PLEC 533778 3 6 44.1 794.85 HUMAN 1 -24.0047 19.1874 RSDELLGSDDSHDGE-p P38398;S395-p RSDELLGSDDSHDGE 0.739466638213317 0.0521054341908535 -0.0483333333333333 -0.441333333333333 2.48420485662007 17.1212670279848 -0.0483333333333333 -0.441333333333333 0.564390265269745 0.0194031971842256 -0.613549782668025 -3.28403291842849 P38398 BRCA1 P38398.S395.p_BRCA1 P38398_S395s _1_1_395_395 P38398 P38398-7|P38398-4|P38398-8|Q5YLB2 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11776.11776.3 19.84 19.84 1.941 5 1 1 0 877.39 2550.1844 S395s TMT10 389 (R) SDELLGsDDSHDGESESNAK (V) S(0.0)DELLGS(0.99)DDS(0.0)HDGES(0.0)ES(0.0)NAK K:TMT10,s:Phosphorylated S BRCA1 210227.6 2 3 106.1 588.91 HUMAN 1 -2.4842 -17.1213 RSDGKNFSPPPFPRK-p F8W912;S58-p RSDGKNFSPPPFPRK 0.318061545883325 0.705159099344392 -0.164666666666667 0.0426666666666667 9.31630015988721 2.08413190103319 -0.164666666666667 0.0426666666666667 0.117049613506663 0.618852015771549 -1.86313092340453 0.527291899045145 F8W912 NotFound F8W912.S58.p_NotFound F8W912_S58s _1_1_58_58 F8W912 Q86Z20|F8W912 Coiled-coil domain-containing protein 125 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20502.20502.2 12.89 12.89 99 1 1 1 0 684.3398 1287.7047 S58s TMT10 56 (K) NFsPPPFPR (K) NFS(1.0)PPPFPR s:Phosphorylated S CCDC125 36565.4 2 1 3771.1 43.49 HUMAN 1 -9.3163 2.0841 RSDPHRCSFSKHHLN-p Q14865;S787-p RSDPHRCSFSKHHLN 0.104209357384164 0.951627785467761 0.546 -0.00733333333333329 20.7217900323557 0.30701867686722 0.546 -0.00733333333333329 0.00846878284218683 0.931747277207089 4.03559522523147 -0.0896982527385988 Q14865 ARID5B Q14865.S787.p_ARID5B Q14865_S787s _1_1_787_787 Q14865 Q14865|Q14865-2 AT-rich interactive domain-containing protein 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5120.5120.3 12.03 5.84 2.113 3 1 1 0 586.9511 1678.8735 S787s TMT10 781 (R) SDPHRCsFSK (H) S(0.0)DPHRCS(0.99)FS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARID5B 133513.4 3 8 1262.1 160.88 HUMAN 1 20.7218 -0.307 RSDQDSDSDQPSRKR-p Q6PD62;S1087-p RSDQDSDSDQPSRKR 0.0350618685416583 0.120286132015524 0.577666666666667 0.1645 33.9697704356145 12.1288066939669 0.577666666666667 0.1645 0.000400887907662574 0.0612518669666633 7.73696361427916 2.35401290547897 Q6PD62 CTR9 Q6PD62.S1087.p_CTR9 Q6PD62_S1085sS1087s_2_2_1085_1087 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4939.4939.3 9.12 9.12 3.373 4 2 2 0 694.9621 1922.9456 S1085s S1087s TMT10 1081 (R) SDQDsDsDQPSRK (R) S(0.0)DQDS(0.99)DS(0.99)DQPS(0.0)RK K:TMT10,s:Phosphorylated S CTR9 134412.8 5 16 152.1 508.81 HUMAN 2 33.9698 12.1288 RSDSAPPTPVNRLSM-p Q86X10;T363-p RSDSAPPTPVNRLSM 0.936234507605524 0.0646181984401455 0.0136666666666667 -0.231666666666667 0.55719454172003 15.8320635063802 0.0136666666666667 -0.231666666666667 0.87959053180374 0.0261092050711795 0.1587926228604 -3.03389480637211 Q86X10 RALGAPB Q86X10.T363.p_RALGAPB Q86X10_T363t _1_1_363_363 Q86X10 Q86X10|Q86X10-3|Q86X10-2|Q86X10-4 Ral GTPase-activating protein subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5963.5963.2 11.79 11.79 2.542 3 1 1 0 725.3511 1369.7273 T363t TMT10 357 (R) SDSAPPtPVNR (L) S(0.0)DS(0.0)APPT(0.99)PVNR t:Phosphorylated T RALGAPB 168564.2 1 3 1153.1 171.93 HUMAN 1 0.5572 -15.8321 RSDVQEESEGSDTDD-p Q9UIG0;S705-p RSDVQEESEGSDTDD 0.223329192805893 0.0540855042709586 -0.305 0.369333333333333 12.5120106171847 16.8880436249065 -0.305 0.369333333333333 0.0560788292415308 0.0204736671042757 -2.42349432420605 3.2381692696587 Q9UIG0 BAZ1B Q9UIG0.S705.p_BAZ1B Q9UIG0_S705sS708s_2_2_705_708 Q9UIG0 Q9UIG0|Q9UIG0-2 Tyrosine-protein kinase BAZ1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5558.5558.3 11.52 11.52 2.767 4 2 2 0 843.686 2369.1105 S705s S708s TMT10 698 (R) RSDVQEEsEGsDTDDNK (D) RS(0.0)DVQEES(0.99)EGS(0.99)DT(0.0)DDNK K:TMT10,s:Phosphorylated S BAZ1B 172497.3 5 14 370.1 339.44 HUMAN 1 -12.512 16.888 RSEAPNSSEEDSPIK-p Q8IYH5;S131-p RSEAPNSSEEDSPIK 0.204713889706557 0.0824598277305984 0.203333333333333 -0.295 13.3205243877317 14.3581499948346 0.203333333333333 -0.295 0.0465529879846179 0.0366593702768918 2.56898731894448 -2.75721036791401 Q8IYH5 ZZZ3 Q8IYH5.S131.p_ZZZ3 Q8IYH5_S130sS131sS135s_3_3_130_135 Q8IYH5 Q8IYH5|Q8IYH5-2|Q8IYH5-4 ZZ-type zinc finger-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13745.13745.4 7.57 7.57 7.568 6 3 3 0 869.6437 3235.6533 S130s S131s S135s TMT10 125 (R) SEAPNssEEDsPIKSDKESVEQR (S) S(0.0)EAPNS(0.99)S(0.99)EEDS(0.99)PIKS(0.0)DKES(0.0)VEQR K:TMT10,s:Phosphorylated S ZZZ3 103390.7 2 12 1027.1 186.83 HUMAN 1 13.3205 -14.3581 RSEDESETEDEEEKS-p P25205-2;T719-p RSEDESETEDEEEKS 0.555457154962577 0.111532827688031 0.0928666666666667 0.313333333333333 4.71489134008388 12.5756710620654 0.0928666666666667 0.313333333333333 0.337684297353664 0.0552628010509674 1.05154154058368 2.43359538302025 P25205 MCM3 P25205.2.T719.p_MCM3 P25205-2_S717sT719t_2_2_717_719 P25205-2 P25205|P25205-2|J3KQ69 Isoform 2 of DNA replication licensing factor MCM3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7003.7003.3 20.6 20.6 1.62 4 2 2 0 1049.424 2986.3173 S717s T719t Hydrogen 713 (R) SEDEsEtEDEEEKSQEDQEQK (R) S(0.0)EDES(0.99)ET(0.99)EDEEEKS(0.0)QEDQEQK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T MCM3 96534.2 48 9 136.1 528.96 HUMAN 3 4.7149 12.5757 RSEDGYHSDGDYGEH-p P52756;S78-p RSEDGYHSDGDYGEH 0.171158122502722 0.00676494660155751 0.229333333333333 1.02933333333333 15.2800696700231 31.1478618658779 0.229333333333333 1.02933333333333 0.029647838277378 0.000767739372526835 2.93114539307742 6.77782109143302 P52756 RBM5 P52756.S78.p_RBM5 P52756_S78s _1_1_78_78 P52756 P52756|P52756-5|P52756-2|P52756-4 RNA-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5197.5197.4 24.94 24.94 2.197 6 1 1 0 734.2785 2854.1208 S78s Hydrogen 72 (R) SEDGYHsDGDYGEHDYRHDISDER (E) S(0.0)EDGY(0.0)HS(0.99)DGDY(0.0)GEHDY(0.0)RHDIS(0.0)DER s:Phosphorylated S RBM5 92665.7 6 3 560.1 271.79 HUMAN 1 15.2801 31.1479 RSEDLDNSIDKTEAG-p Q9UQE7;S886-p RSEDLDNSIDKTEAG 0.262842348634952 0.018957101455693 0.182333333333333 0.335 11.0099624643959 23.6888435576333 0.182333333333333 0.335 0.0792508180013674 0.00427676753053859 2.15785477687247 4.71369848722896 Q9UQE7 SMC3 Q9UQE7.S886.p_SMC3 Q9UQE7_S886s _1_1_886_886 Q9UQE7 Q9UQE7 Structural maintenance of chromosomes protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15444.15444.3 16.9 16.9 4.988 3 1 1 0 834.7731 2422.328 S886s TMT10 880 (R) SEDLDNsIDKTEAGIK (E) S(0.0)EDLDNS(0.99)IDKT(0.0)EAGIK K:TMT10,s:Phosphorylated S SMC3 141938.5 1 3 1472.1 139.47 HUMAN 1 11.01 23.6888 RSEDMPFSPKASVAA-p Q12888-2;S270-p RSEDMPFSPKASVAA 0.804661397719842 0.122200418194899 0.0386666666666667 0.164333333333333 1.81946822586747 12.0411112237535 0.0386666666666667 0.164333333333333 0.657738369540969 0.0625012751098803 0.468440129909813 2.33845718439947 Q12888 TP53BP1 Q12888.2.S270.p_TP53BP1 Q12888-2_S270s _1_1_270_270 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13843.13843.2 17.26 9.44 4.648 2 1 1 0 1233.104 2385.2273 S270s TMT10 256 (K) EQNPPPARSEDMPFsPK (A) EQNPPPARS(0.0)EDMPFS(0.99)PK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 26 10 3.1 2297.07 HUMAN 1 1.8195 12.0411 RSEEISESESEETNA-p P54259;S79-p RSEEISESESEETNA 0.908569951975086 0.288789659711844 -0.0186666666666667 0.145666666666667 0.819003807303544 7.11632085484451 -0.0186666666666667 0.145666666666667 0.828132100396797 0.194253080441239 -0.227840200063746 1.48094360749359 P54259 ATN1 P54259.S79.p_ATN1 P54259_S77sS79s_2_2_77_79 P54259 P54259 Atrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7975.7975.2 12.61 9.82 1.301 5 2 2 0 1077.9338 1994.924 S77s S79s Hydrogen 73 (R) SEEIsEsESEETNAPK (K) S(0.0)EEIS(0.99)ES(0.99)ES(0.0)EET(0.0)NAPK K:TMT10-Lys-Only,s:Phosphorylated S ATN1 125583.1 4 12 869.1 209.92 HUMAN 1 -0.819 7.1163 RSEGPSLSPSGKRLP-p A8MU93;S54-p RSEGPSLSPSGKRLP 0.238535570822241 0.0386745972221711 0.172333333333333 0.260666666666667 11.9080230831637 18.9705378089392 0.172333333333333 0.260666666666667 0.064446255935295 0.0126749489580115 2.31603101516737 3.65821627707811 A8MU93 NotFound A8MU93.S54.p_NotFound A8MU93_S54s _1_1_54_54 A8MU93 A8MU93|D3DTM5 Uncharacterized protein C17orf100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7616.7616.3 15.31 15.31 2.836 4 1 1 0 580.6419 1659.943 S54s TMT10 47 (R) RSEGPSLsPSGK (R) RS(0.0)EGPS(0.0)LS(0.99)PS(0.0)GK K:TMT10,s:Phosphorylated S C17orf100 18115 4 1 4639.1 28.48 HUMAN 1 11.908 18.9705 RSEHKVWSPLVTEEG-p O00151;S90-p RSEHKVWSPLVTEEG 0.505031370996872 0.0345299216923991 0.132333333333333 -0.500666666666667 5.47987718619664 19.6921950215085 0.132333333333333 -0.500666666666667 0.283147206564855 0.0107344673120904 1.19131663231724 -3.80970621525156 O00151 PDLIM1 O00151.S90.p_PDLIM1 O00151_S90s _1_1_90_90 O00151 O00151 PDZ and LIM domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17033.17033.4 15.53 15.53 4.71 3 1 1 0 674.1249 2613.512 S90s TMT10 88 (K) VWsPLVTEEGKRHPYK (M) VWS(0.99)PLVT(0.0)EEGKRHPY(0.0)K K:TMT10,s:Phosphorylated S PDLIM1 36527.5 5 1 1380.1 148.35 HUMAN 1 5.4799 -19.6922 RSEIKGFYDPPRRLL-p P31942;Y100-p RSEIKGFYDPPRRLL 0.856573366450357 0.187720986073057 -0.027 0.137 1.30923536231694 9.55638531218924 -0.027 0.137 0.73973550463177 0.110754522433632 -0.349743964844642 1.90399963993379 P31942 HNRNPH3 P31942.Y100.p_HNRNPH3 P31942_Y100y _1_1_100_100 P31942 P31942|P31942-2|P31942-3 Heterogeneous nuclear ribonucleoprotein H3 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.7940.8047.3 11.38 11.38 99 1 1 1 0 439.5496 1236.6687 Y100y TMT10 98 (K) GFyDPPRR (L) GFY(1.0)DPPRR y:Phosphorylated Y HNRNPH3 36982.9 4 1 81.1 32.19 HUMAN 1 -1.3092 9.5564 RSENVLMSPWKGKLI-p Q5VWN6;S19-p RSENVLMSPWKGKLI 0.212579182379981 0.021639767427757 -0.399 -0.332333333333333 12.9792799917178 22.7632741779839 -0.399 -0.332333333333333 0.0503584090083736 0.00529264277218893 -2.50733395777263 -4.49372152723967 Q5VWN6 FAM208B Q5VWN6.S19.p_FAM208B Q5VWN6_S19s _1_1_19_19 Q5VWN6 Q5VWN6|Q5VWN6-2 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20253.20253.3 13.44 9.88 6.106 2 1 1 0 715.0585 2063.1926 S19s TMT10 13 (R) SENVLMsPWKGK (L) S(0.0)ENVLMS(0.99)PWKGK K:TMT10,s:Phosphorylated S FAM208B 271861.7 3 1 275.1 391.61 HUMAN 1 -12.9793 -22.7633 RSEVFRKSIGILNIF-p Q8NDA8;S718-p RSEVFRKSIGILNIF 0.176053518103929 0.542767729972682 -0.22 -0.111333333333333 14.9923719632316 3.57069256534564 -0.22 -0.111333333333333 0.0316783682977282 0.439471527736345 -2.87702064978022 -0.833992385620375 Q8NDA8 MROH1 Q8NDA8.S718.p_MROH1 Q8NDA8_S718s _1_1_718_718 Q8NDA8 Q8NDA8|E9PHY8|Q8NDA8-2 Maestro heat-like repeat-containing protein family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36199.36199.2 10.2 10.2 99 1 1 1 0 771.9583 1462.9398 S718s TMT10 718 (K) sIGILNIFK (D) S(1.0)IGILNIFK K:TMT10,s:Phosphorylated S MROH1 183813.7 1 1 6676.1 10.2 HUMAN 1 -14.9924 -3.5707 RSFADFKSEDELNQL-p P26045;S607-p RSFADFKSEDELNQL 0.43606840550564 0.282908801865195 0.104666666666667 -0.108 6.63489185786691 7.23100387216077 0.104666666666667 -0.108 0.217025524365386 0.189190625376496 1.39693908100352 -1.50096321980182 P26045 PTPN3 P26045.S607.p_PTPN3 P26045_S607s_1_1_607_607 P26045 P26045|J3KN34|P26045-2 Tyrosine-protein phosphatase non-receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36255.36255.5 16.55 10.97 1.115 4 1 1 0 1075.7357 5293.6917 S607s N612n TMT10 601 (R) SFADFKsEDELnQLFPEAIFPMCPEGGDTLEGSMAQLKK (G) S(0.0)FADFKS(0.99)EDELN(1.0)QLFPEAIFPMCPEGGDT(0.0)LEGS(0.0)MAQLKK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated PTPN3 105129.1 2 9 1253.1 161.68 HUMAN 1 6.6349 -7.231 RSFAGAVSPQEEEEF-p P33992;S315-p RSFAGAVSPQEEEEF 0.579965732613118 0.827950080485717 0.078 0.0213333333333334 4.35231192733006 1.1470043916449 0.078 0.0213333333333334 0.36708683312502 0.767890970520952 0.983903258501634 0.310325833730087 P33992 MCM5 P33992.S315.p_MCM5 P33992_S315s _1_1_315_315 P33992 P33992|B1AHB1 DNA replication licensing factor MCM5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14361.14361.3 7.98 7.98 7.983 2 1 1 0 716.6719 2068.0297 S315s TMT10 309 (R) SFAGAVsPQEEEEFRR (L) S(0.0)FAGAVS(0.99)PQEEEEFRR s:Phosphorylated S MCM5 83082.8 1 2 3773.1 43.41 HUMAN 1 4.3523 1.147 RSFCSAPSLRRHVRV-p Q8N1G0;S1007-p RSFCSAPSLRRHVRV 0.180325945197864 0.579815811366854 0.263 -0.0656666666666667 14.6748456817099 3.19422665627559 0.263 -0.0656666666666666 0.0340812434707348 0.479266787855028 2.81768775063194 -0.759482611262063 Q8N1G0 ZNF687 Q8N1G0.S1007.p_ZNF687 Q8N1G0_S1007s _1_1_1007_1007 Q8N1G0 Q8N1G0|Q8N1G0-2 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9586.9586.3 9.09 9.09 9.091 3 1 1 0 497.244 1409.7521 S1007s TMT10 1001 (R) SFCSAPsLRR (H) S(0.0)FCS(0.0)APS(0.99)LRR C:Carbamidomethylation,s:Phosphorylated S ZNF687 131979.7 2 15 156.1 501.88 HUMAN 1 14.6748 -3.1942 RSFIRTKSLIAQDHR-p O15013;S379-p RSFIRTKSLIAQDHR 0.191522536825993 0.198367031963421 0.24 -0.243666666666667 14.0107914257275 9.24421428473084 0.24 -0.243666666666667 0.0397119174851831 0.119008661733101 2.69490002811328 -1.84996076113132 O15013 ARHGEF10 O15013.S379.p_ARHGEF10 O15013_S379s _1_1_379_379 O15013 O15013|O15013-6|O15013-5|O15013-4|O15013-7|E9PB39 Rho guanine nucleotide exchange factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8050.8050.3 10.09 5.23 1.367 2 1 1 0 569.6506 1626.9692 S379s TMT10 377 (R) TKsLIAQDHR (S) T(0.0)KS(0.99)LIAQDHR K:TMT10,s:Phosphorylated S ARHGEF10 152807 4 2 2315.1 88.25 HUMAN 1 14.0108 -9.2442 RSFLSEPSSPGRTKT-p Q69YN4;S1578-p RSFLSEPSSPGRTKT 0.801313682662727 0.944232842957325 -0.038 0.00933333333333335 1.85219032644409 0.357916372716071 -0.038 0.00933333333333336 0.652801234985472 0.920891284477294 -0.475813881315135 0.104022101779692 Q69YN4 KIAA1429 Q69YN4.S1578.p_KIAA1429 Q69YN4_S1578sS1579s_2_2_1578_1579 Q69YN4 Q69YN4|Q69YN4-3 Protein virilizer homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16310.16310.3 7.06 7.06 7.063 5 2 2 0 670.9958 1851.0376 S1578s S1579s TMT10 1572 (R) SFLSEPssPGRTK (T) S(0.0)FLS(0.0)EPS(0.99)S(0.99)PGRT(0.0)K K:TMT10,s:Phosphorylated S VIRMA 203675.9 1 11 1178.1 169.26 HUMAN 1 -1.8522 0.3579 RSFPRAPTVHGGAGG-p Q9C075;T33-p RSFPRAPTVHGGAGG 0.282535045693496 0.176071094793262 0.430666666666667 0.295666666666667 10.3751164389265 9.91907873667832 0.430666666666667 0.295666666666667 0.0917251342585159 0.101880748345978 2.04696307793629 1.96686689268038 Q9C075 KRT23 Q9C075.T33.p_KRT23 Q9C075_T33t _1_1_33_33 Q9C075 Q9C075 Keratin, type I cytoskeletal 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7805.7805.3 13.19 13.19 2.847 2 1 1 0 616.314 1766.9612 T33t TMT10 27 (R) SFPRAPtVHGGAGGAR (I) S(0.0)FPRAPT(0.99)VHGGAGGAR t:Phosphorylated T KRT23 48301.4 5 2 2033.1 101.49 HUMAN 1 10.3751 9.9191 RSGAPPPSPPVGGPA-p Q2TAZ0-3;S1329-p RSGAPPPSPPVGGPA 0.890459560272579 0.804326179177927 0.0266666666666667 0.034 0.984398197731772 1.32367858195174 0.0266666666666667 0.034 0.797186949206819 0.737279471579052 0.269960287934151 0.353172252662247 Q2TAZ0 ATG2A Q2TAZ0.3.S1329.p_ATG2A Q2TAZ0-3_S1329s _1_1_1329_1329 Q2TAZ0-3 Q2TAZ0-3 Isoform 2 of Autophagy-related protein 2 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15635.15635.3 16.53 16.53 4.732 5 1 1 0 920.7886 2680.3653 S1329s TMT10 1323 (R) SGAPPPsPPVGGPAGSLGSCSEEK (E) S(0.0)GAPPPS(0.99)PPVGGPAGS(0.0)LGS(0.0)CS(0.0)EEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATG2A 215251.5 1 5 2029.1 101.69 HUMAN 1 0.9844 1.3237 RSGDSDQTDEDGEPG-p Q9BV36;T165-p RSGDSDQTDEDGEPG 0.361753568197081 0.0263297759478762 0.143333333333333 0.331 8.20425014238673 21.4664083855768 0.143333333333333 0.331 0.151208075434376 0.00713442803265312 1.67057516038441 4.19666574239226 Q9BV36 MLPH Q9BV36.T165.p_MLPH Q9BV36_S162sT165t_2_2_162_165 Q9BV36 Q9BV36|Q9BV36-2|Q9BV36-4|Q9BV36-5 Melanophilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14369.14369.4 17.22 17.52 1.102 5 2 2 0 929.1655 3553.7134 S162s T165t TMT10 159 (R) SGDsDQtDEDGEPGSEAQAQAQPFGSKK (K) S(0.0)GDS(0.99)DQT(0.99)DEDGEPGS(0.0)EAQAQAQPFGS(0.0)KK K:TMT10,s:Phosphorylated S,t:Phosphorylated T MLPH 66632.6 7 11 496.1 293.1 HUMAN 1 8.2043 21.4664 RSGETEDTFIADLVV-p P06733;T379-p RSGETEDTFIADLVV 0.144678447430122 0.00596953490640367 0.362 0.65 17.1361053909335 32.1209824811054 0.362 0.65 0.0193370161928075 0.000613623172783598 3.28949017396596 7.09200822302084 P06733 ENO1 P06733.T379.p_ENO1 P06733_T379t _1_1_379_379 P06733 P06733|P09104|P13929|P13929-2|P09104-2 Alpha-enolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.37239.37239.3 15.61 11.75 1.13 4 1 1 0 964.4878 2811.485 T379t TMT10 373 (R) SGETEDtFIADLVVGLCTGQIK (T) S(0.0)GET(0.0)EDT(0.99)FIADLVVGLCT(0.0)GQIK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ENO1 47510.4 1 14 623.1 259.34 HUMAN 1 17.1361 32.121 RSGGDTHSPPRGLGP-p O43295;S874-p RSGGDTHSPPRGLGP 0.765963295929894 0.0994199807847619 0.045 0.217666666666667 2.22335111078839 13.2480733407214 0.045 0.217666666666667 0.599328442912776 0.0473361209476129 0.557715661598348 2.55443237219018 O43295 SRGAP3 O43295.S874.p_SRGAP3 O43295_S874s _1_1_874_874 O43295 O43295|O43295-2 SLIT-ROBO Rho GTPase-activating protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9422.9422.5 16.99 16.99 2.851 5 1 1 0 482.8394 2330.205 S874s TMT10 868 (R) SGGDTHsPPRGLGPSIDTPPR (A) S(0.0)GGDT(0.0)HS(0.99)PPRGLGPS(0.0)IDT(0.0)PPR s:Phosphorylated S SRGAP3 125471.5 5 7 754.1 231.27 HUMAN 1 2.2234 13.2481 RSGGHKRSFD_____-p Q9BQ39;S735-p RSGGHKRSFD_____ 0.1560557092084 0.746974650804076 0.230333333333333 0.0336666666666667 16.1926476158186 1.7489038659868 0.230333333333333 0.0336666666666667 0.0240289746042218 0.668512624975723 3.10526855827455 0.452397708944314 Q9BQ39 DDX50 Q9BQ39.S735.p_DDX50 Q9BQ39_S735s _1_1_735_735 Q9BQ39 Q9BQ39 ATP-dependent RNA helicase DDX50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3600.3600.3 8.29 8.29 8.287 2 1 1 0 510.2617 1448.801 S735s TMT10 729 (R) SGGHKRsFD (-) S(0.0)GGHKRS(0.99)FD K:TMT10,s:Phosphorylated S DDX50 83134.1 1 10 103.2 590.75 HUMAN 1 16.1926 1.7489 RSGKPRGYAFIEYEH-p P08621;Y146-p RSGKPRGYAFIEYEH 0.481005429235313 0.640465769177158 0.109666666666667 -0.0733333333333333 5.85251913693835 2.6356769941929 0.109666666666667 -0.0733333333333334 0.259865177089002 0.545044925461056 1.25824619752414 -0.645305921884006 P08621 SNRNP70 P08621.Y146.p_SNRNP70 P08621_Y146y _1_1_146_146 P08621 P08621|P08621-2|P08621-3 U1 small nuclear ribonucleoprotein 70 kDa GG20160819_MSz_CCLE_T4D7_pY_Injection_02.15982.15982.3 17.65 17.65 17.649 2 1 1 0 574.9318 1642.8063 Y146y TMT10 145 (R) GyAFIEYEHER (D) GY(0.99)AFIEY(0.0)EHER y:Phosphorylated Y SNRNP70 51612.9 2 2 41.1 48.77 HUMAN 1 5.8525 -2.6357 RSGKSGPSPTTPQPL-p J3KQR7;S973-p RSGKSGPSPTTPQPL 0.769192567611738 0.542644163048135 0.0413333333333333 0.0693333333333334 2.18549985802017 3.57234550615761 0.0413333333333333 0.0693333333333334 0.604574762863106 0.439304295079116 0.549501397212664 0.834315733475808 J3KQR7 NotFound J3KQR7.S973.p_NotFound J3KQR7_S973s _1_1_973_973 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10787.10787.3 7.51 7.51 7.509 4 1 1 0 701.717 2023.17 S973s TMT10 970 (K) SGPsPTTPQPLRAQK (E) S(0.0)GPS(0.99)PT(0.0)T(0.0)PQPLRAQK K:TMT10,s:Phosphorylated S CEP170B 172326.6 3 22 51.1 746.11 HUMAN 1 2.1855 3.5723 RSGNTPNSPRLAAES-p Q96EA4;S555-p RSGNTPNSPRLAAES 0.235994492699351 0.0119195582660442 0.413333333333333 -1.08766666666667 12.0123332318495 26.8821013120747 0.413333333333333 -1.08766666666667 0.0629168073703705 0.00205016997434603 2.33452233620199 -5.52921131449302 Q96EA4 SPDL1 Q96EA4.S555.p_SPDL1 Q96EA4_S555s _1_1_555_555 Q96EA4 Q96EA4|Q96EA4-3|Q96EA4-2 Protein Spindly HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7680.7680.3 12.32 6.88 2.177 4 1 1 0 689.6916 1987.0973 S555s TMT10 549 (R) SGNTPNsPRLAAESK (L) S(0.0)GNT(0.0)PNS(0.99)PRLAAES(0.0)K K:TMT10,s:Phosphorylated S SPDL1 70798.5 2 1 5268.1 21.21 HUMAN 1 12.0123 -26.8821 RSGPRAPSPTKPLRR-p B5MBX0;S21-p RSGPRAPSPTKPLRR 0.242513966680905 0.00160137763209639 0.204333333333333 -0.862666666666667 11.7716774551228 44.717148408652 0.204333333333333 -0.862666666666667 0.0665016245184405 3.37508845298795e-05 2.29190082227153 -12.4710685847646 B5MBX0 NotFound B5MBX0.S21.p_NotFound B5MBX0_S21s _1_1_21_21 B5MBX0 B5MBX0|Q96FF9 Sororin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5555.5555.3 11.46 7.78 1.448 3 1 1 0 512.6167 1455.8684 S21s TMT10 15 (R) SGPRAPsPTK (P) S(0.0)GPRAPS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S CDCA5 34133.5 23 1 682.1 245.26 HUMAN 1 11.7717 -44.7171 RSGSAHGSGKSARHT-p P62995;S26-p RSGSAHGSGKSARHT 0.544463415002689 0.00670130303311298 0.243 1.436 4.87545816038588 31.2282652832932 0.243 1.436 0.325427450611627 0.000753656539125572 1.08118496963384 6.80333778497884 P62995 TRA2B P62995.S26.p_TRA2B P62995_S26s _1_1_26_26 P62995 P62995 Transformer-2 protein homolog beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.2431.2431.3 12.36 12.36 10.147 3 1 1 0 442.5586 1245.6952 S26s TMT10 20 (R) SGSAHGsGK (S) S(0.0)GS(0.0)AHGS(0.99)GK K:TMT10,s:Phosphorylated S TRA2B 33779.2 1 100 8.3 1346.57 HUMAN 1 4.8755 31.2283 RSGSPPKSPRTTVHD-p J3KNJ8;S107-p RSGSPPKSPRTTVHD 0.408116983785071 0.011710589904749 -0.111 -0.424 7.18105572454621 27.0096486394077 -0.111431141678327 -0.424 0.191379064594462 0.00199083439847267 -1.49267033059982 -5.56375355795156 J3KNJ8 DNAJC4 J3KNJ8.S107.p_DNAJC4 J3KNJ8_S107s _1_1_107_107 J3KNJ8 J3KNJ8|Q9NNZ3 DnaJ homolog subfamily C member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.3911.3911.3 8.55 4.12 3.444 3 1 1 0 484.2655 1370.8156 S107s TMT10 101 (R) SGSPPKsPR (T) S(0.0)GS(0.0)PPKS(0.99)PR K:TMT10,s:Phosphorylated S DNAJC4 28410.7 1 1 6947.1 8.55 HUMAN 1 -7.1811 -27.0096 RSGSRKRSWGHESPE-p Q9UKJ3;S1009-p RSGSRKRSWGHESPE 0.403159221089301 0.102017438932645 0.312666666666667 0.264666666666667 7.28362747945893 13.0944823472735 0.312666666666667 0.264666666666667 0.186912029048341 0.0490401472194593 1.51057505088644 2.52670778578217 Q9UKJ3 GPATCH8 Q9UKJ3.S1009.p_GPATCH8 Q9UKJ3_S1009sS1014s_2_2_1009_1014 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4209.4209.2 9.37 9.37 99 2 2 2 0 687.2317 1213.5232 S1009s S1014s Hydrogen 1009 (R) sWGHEsPEER (H) S(1.0)WGHES(1.0)PEER s:Phosphorylated S GPATCH8 165107.3 3 19 231.1 422.52 HUMAN 1 7.2836 13.0945 RSGSRRGSFDATGNS-p P15924;S2849-p RSGSRRGSFDATGNS 0.202893185580468 0.436309418540271 0.316 0.111333333333333 13.4271486649283 4.79892465939294 0.316 0.111333333333333 0.0454239747226253 0.33121312179421 2.58832926776699 1.06686948738559 P15924 DSP P15924.S2849.p_DSP P15924_S2849s _1_1_2849_2849 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17557.17557.3 17.13 17.13 2.521 14 1 1 0 987.426 2880.291 S2849s TMT10 2847 (R) RGsFDATGNSSYSYSYSFSSSSIGH (-) RGS(0.99)FDAT(0.0)GNS(0.0)S(0.0)Y(0.0)S(0.0)Y(0.0)S(0.0)Y(0.0)S(0.0)FS(0.0)S(0.0)S(0.0)S(0.0)IGH s:Phosphorylated S DSP 334221.3 2 24 104.1 590.4 HUMAN 1 13.4271 4.7989 RSGSRSSSLGSTPHE-p Q9NRA8;S353-p RSGSRSSSLGSTPHE 0.17776892686696 0.166444982529729 -0.269666666666667 0.142 14.8639700681454 10.2412742689028 -0.269666666666667 0.142 0.0326289420942976 0.0945959565456773 -2.85297736820295 2.02282062426315 Q9NRA8 EIF4ENIF1 Q9NRA8.S353.p_EIF4ENIF1 Q9NRA8_S353sS356s_2_2_353_356 Q9NRA8 Q9NRA8-3|B1AKL4|Q9NRA8-2 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10053.10053.2 7.94 7.94 1.327 5 2 2 0 959.4146 1757.8867 S353s S356s TMT10 351 (R) SSsLGsTPHEELER (L) S(0.0)S(0.0)S(0.99)LGS(0.99)T(0.0)PHEELER s:Phosphorylated S EIF4ENIF1 108541.3 4 24 150.1 511.59 HUMAN 1 -14.864 10.2413 RSGVQMPTPPPSGYN-p Q9P2G1;T290-p RSGVQMPTPPPSGYN 0.729035669255208 0.229595679783943 0.0546666666666667 -0.137666666666667 2.60571267721414 8.41860509475739 0.0546666666666667 -0.137666666666667 0.548818487107267 0.143926077846999 0.639123658242428 -1.70713997730453 Q9P2G1 ANKIB1 Q9P2G1.T290.p_ANKIB1 Q9P2G1_T290t _1_1_290_290 Q9P2G1 Q9P2G1 Ankyrin repeat and IBR domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25286.25286.3 14.07 14.07 5.36 6 1 1 0 922.1058 2684.334 T290t TMT10 284 (R) SGVQMPtPPPSGYNAWDTLPSPR (T) S(0.0)GVQMPT(0.99)PPPS(0.0)GY(0.0)NAWDT(0.0)LPS(0.0)PR t:Phosphorylated T ANKIB1 124110.4 1 2 1291.1 157.55 HUMAN 1 2.6057 -8.4186 RSHDSDDSDYASSKH-p Q9UKJ3;S914-p RSHDSDDSDYASSKH 0.885820345057877 0.0970280843037502 0.0263333333333333 0.231166666666667 1.03618319119933 13.396083306797 0.0263333333333333 0.231166666666667 0.787737791055205 0.04575006014239 0.28293013470709 2.58122187883301 Q9UKJ3 GPATCH8 Q9UKJ3.S914.p_GPATCH8 Q9UKJ3_S911sS914s_2_2_911_914 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4669.4669.2 12.74 12.74 2.903 6 2 2 0 901.8214 1642.703 S911s S914s Hydrogen 908 (R) SHDsDDsDYASSK (H) S(0.0)HDS(0.99)DDS(0.99)DY(0.0)AS(0.0)S(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S GPATCH8 165107.3 6 17 231.1 422.52 HUMAN 2 1.0362 13.3961 RSHHAPMSPGSSGGG-p O14497;S363-p RSHHAPMSPGSSGGG 0.763958217078772 0.72204717354958 -0.0513333333333333 0.035 2.24273846078115 1.94688583730515 -0.0513333333333334 0.035 0.59665894232223 0.638721325105909 -0.561911556124445 0.496949994328074 O14497 ARID1A O14497.S363.p_ARID1A O14497_S363s _1_1_363_363 O14497 O14497|O14497-2 AT-rich interactive domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4843.4843.3 13.64 13.64 5.255 4 1 1 0 733.01 2117.0508 S363s TMT10 357 (R) SHHAPMsPGSSGGGGQPLAR (T) S(0.0)HHAPMS(0.99)PGS(0.0)S(0.0)GGGGQPLAR s:Phosphorylated S ARID1A 242953.4 1 2 3995.1 39.48 HUMAN 1 -2.2427 1.9469 RSHHKDHSDSESTSS-p A0A087X0R0;S1089-p RSHHKDHSDSESTSS 0.0217780195589434 0.828650801620176 0.779333333333333 -0.0283333333333333 38.5552327960379 1.14059279545972 0.779333333333333 -0.0283333333333333 0.00013946868958599 0.769025464069662 9.52110309272322 -0.308751108368066 A0A087X0R0 NotFound A0A087X0R0.S1089.p_NotFound A0A087X0R0_S1089s _1_1_1089_1089 A0A087X0R0 A0A087X0R0|O15550|F8W8R6|F5H6S1 Lysine-specific demethylase 6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.2726.2726.5 13.91 13.91 2.46 8 1 1 0 553.6548 2684.2773 S1089s TMT10 1083 (R) SHHKDHsDSESTSSDNSGRR (R) S(0.0)HHKDHS(0.99)DS(0.0)ES(0.0)T(0.0)S(0.0)S(0.0)DNS(0.0)GRR K:TMT10,s:Phosphorylated S KDM6A 159358.2 2 4 2962.1 64.6 HUMAN 1 38.5552 -1.1406 RSHISDQSPLSSKRK-p P42166;S351-p RSHISDQSPLSSKRK 0.942209909891952 0.00259686134026793 0.011 -0.88 0.508268924980248 39.4655406819968 0.011 -0.88 0.889555619404898 0.000113095658028516 0.145535674693492 -9.89354558821284 P42166 TMPO P42166.S351.p_TMPO P42166_S351s _1_1_351_351 P42166 P42166 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8631.8631.2 15.64 15.64 3.241 5 1 1 0 912.4694 1743.9641 S351s TMT10 345 (R) SHISDQsPLSSK (R) S(0.0)HIS(0.0)DQS(0.99)PLS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S TMPO 76061.2 6 18 123.1 546.19 HUMAN 1 0.5083 -39.4655 RSHKEPPSPADVPEK-p Q86VP3-2;S349-p RSHKEPPSPADVPEK 0.297927914099142 0.177265925915221 -0.159333333333333 -0.185666666666667 9.88963202795987 9.88252858353694 -0.159333333333333 -0.185666666666667 0.102573883208068 0.102741793259032 -1.96254199680414 -1.9605263585738 Q86VP3 PACS2 Q86VP3.2.S349.p_PACS2 Q86VP3-2_S349s _1_1_349_349 Q86VP3-2 Q86VP3-2|Q86VP3-3|F8VW41|Q86VP3-4 Isoform 2 of Phosphofurin acidic cluster sorting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8686.8686.3 18.93 18.93 18.93 2 1 1 0 762.41 2205.2482 S349s TMT10 343 (R) SHKEPPsPADVPEK (T) S(0.0)HKEPPS(0.99)PADVPEK K:TMT10,s:Phosphorylated S PACS2 100425.5 5 1 1483.1 138.31 HUMAN 1 -9.8896 -9.8825 RSHSLSPSPVNKHKQ-p Q96GE4;S453-p RSHSLSPSPVNKHKQ 0.206758450653763 0.150862215249214 0.200333333333333 -0.203666666666667 13.2312634097429 10.8043127120467 0.200333333333333 -0.203666666666667 0.0475196965882677 0.0830938207508988 2.55282406891487 -2.12092412937468 Q96GE4 CEP95 Q96GE4.S453.p_CEP95 Q96GE4_S453s _1_1_453_453 Q96GE4 Q96GE4|A0A0A0MTQ1|Q96GE4-2 Centrosomal protein of 95 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7978.7978.3 8.28 8.28 2.994 4 1 1 0 564.3027 1610.9266 S453s TMT10 447 (R) SHSLSPsPVNK (H) S(0.0)HS(0.0)LS(0.0)PS(0.99)PVNK K:TMT10,s:Phosphorylated S CEP95 95922.6 1 5 2407.1 84.85 HUMAN 1 13.2313 -10.8043 RSHSVPRSPSQGSYS-p Q5VTI5;S479-p RSHSVPRSPSQGSYS 0.102231937186315 0.0645697468226713 0.304 0.273333333333333 20.9542860574206 15.8377921779042 0.304 0.273333333333333 0.00802733512475551 0.0260747877664602 4.08680972429112 3.03498864747375 Q5VTI5 NotFound Q5VTI5.S479.p_NotFound Q5VTI5_S479s _1_1_479_479 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3439.3439.3 16.99 11.85 1.287 7 1 1 0 647.6442 1860.9514 S479s TMT10 473 (R) SHSVPRsPSQGSYSR (A) S(0.0)HS(0.0)VPRS(0.99)PS(0.0)QGS(0.0)Y(0.0)S(0.0)R s:Phosphorylated S PLEKHA6 119745.7 8 16 52.1 743.36 HUMAN 1 20.9543 15.8378 RSHYLADSDPLISKS-p O94929;S576-p RSHYLADSDPLISKS 0.240839339020782 0.00605456056815993 0.346 0.648333333333333 11.816954724131 32.011557429452 0.346 0.648333333333333 0.0658119149196685 0.000629280475246838 2.29990895156834 7.05608827755664 O94929 ABLIM3 O94929.S576.p_ABLIM3 O94929_S576s _1_1_576_576 O94929 O94929|A0A0C4DGA7|O94929-3|O94929-2|A0A0A0MRD5|O94929-4 Actin-binding LIM protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17519.17519.3 20.02 20.02 7.256 4 1 1 0 662.0109 1904.053 S576s TMT10 570 (R) SHYLADsDPLISK (S) S(0.0)HY(0.0)LADS(0.99)DPLIS(0.0)K K:TMT10,s:Phosphorylated S ABLIM3 79511.8 1 5 2058.1 100.14 HUMAN 1 11.817 32.0116 RSINKLDSPDPFKLN-p P42566;S796-p RSINKLDSPDPFKLN 0.557101429711056 0.00295034438929059 -0.108666666666667 0.703666666666667 4.69132281729327 38.1583513229379 -0.108666666666667 0.703666666666667 0.339521841902451 0.00015281460658869 -1.04717512922849 9.33308747766651 P42566 EPS15 P42566.S796.p_EPS15 P42566_S796s _1_1_796_796 P42566 P42566|B1AUU8|P42566-2 Epidermal growth factor receptor substrate 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27822.27822.4 15.88 15.88 1.653 3 1 1 0 1003.5283 3931.1412 S796s TMT10 790 (R) SINKLDsPDPFKLNDPFQPFPGNDSPK (E) S(0.0)INKLDS(0.99)PDPFKLNDPFQPFPGNDS(0.0)PK K:TMT10,s:Phosphorylated S EPS15 99281.5 15 15 342.1 353.17 HUMAN 1 -4.6913 38.1584 RSIPGRGSQKSESKM-p Q7L099-3;S512-p RSIPGRGSQKSESKM 0.556318909489347 0.138571516170084 -0.128666666666667 0.154666666666667 4.70192082988056 11.3069969366708 -0.128666666666667 0.154666666666667 0.338694322767087 0.0740116874829107 -1.04913906009622 2.20895441599018 Q7L099 RUFY3 Q7L099.3.S512.p_RUFY3 Q7L099-3_S512s _1_1_512_512 Q7L099-3 Q7L099-3|Q7L099-4 Isoform 3 of Protein RUFY3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.5978.5978.3 10.41 10.41 10.408 2 1 1 0 489.9411 1387.8422 S512s TMT10 506 (R) SIPGRGsQK (S) S(0.0)IPGRGS(0.99)QK K:TMT10,s:Phosphorylated S RUFY3 71350.3 1 1 6638.1 10.41 HUMAN 1 -4.7019 11.307 RSIQPQVSPRQRVQR-p Q13322;S104-p RSIQPQVSPRQRVQR 0.367637362775763 0.0814045473053514 -0.142 -0.414333333333333 8.06514709270011 14.4453540912402 -0.142 -0.414333333333333 0.156129615699461 0.0359306100428881 -1.64646004483565 -2.77333138972192 Q13322 GRB10 Q13322.S104.p_GRB10 Q13322_S104s _1_1_104_104 Q13322 Q13322|Q13322-4|Q13322-2|Q13322-3 Growth factor receptor-bound protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8954.8954.2 10.67 1.88 6.897 2 1 1 0 660.8474 1240.7211 S104s TMT10 98 (R) SIQPQVsPR (Q) S(0.0)IQPQVS(0.99)PR s:Phosphorylated S GRB10 68200.1 3 2 2006.1 102.87 HUMAN 1 -8.0651 -14.4454 RSIREKQSDDEVYAP-p Q15459;S451-p RSIREKQSDDEVYAP 0.377499561171247 0.537037118330437 0.135666666666667 -0.0713333333333333 7.82022886774918 3.63340638232622 0.135666666666667 -0.0713333333333333 0.16518747442064 0.433170988086813 1.60395886364987 -0.846238547159226 Q15459 SF3A1 Q15459.S451.p_SF3A1 Q15459_S451s _1_1_451_451 Q15459 Q15459|Q15459-2 Splicing factor 3A subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23210.23210.4 20.06 16.98 6.897 4 1 1 0 691.0954 2681.3922 S451s Hydrogen 448 (R) EKQsDDEVYAPGLDIESSLK (Q) EKQS(0.99)DDEVY(0.0)APGLDIES(0.0)S(0.0)LK K:TMT10-Lys-Only,s:Phosphorylated S SF3A1 88941.6 6 4 1612.1 127.6 HUMAN 1 7.8202 -3.6334 RSISLSQSAENVPAS-p Q4ADV7;S1021-p RSISLSQSAENVPAS 0.751136874065957 0.0398508919592681 -0.0556666666666667 -0.293 2.36843995202221 18.7709910397175 -0.0556666666666667 -0.293 0.579636872900848 0.0132709158707421 -0.588933523473292 -3.61689254590279 Q4ADV7 RIC1 Q4ADV7.S1021.p_RIC1 Q4ADV7_S1021s _1_1_1021_1021 Q4ADV7 Q4ADV7|Q4ADV7-3|Q4ADV7-2 RAB6A-GEF complex partner protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16393.16393.3 15.18 10.59 2.268 5 1 1 0 686.0293 1976.1064 S1021s TMT10 1015 (R) SISLSQsAENVPASK (F) S(0.0)IS(0.0)LS(0.0)QS(0.99)AENVPAS(0.0)K K:TMT10,s:Phosphorylated S RIC1 160895.7 1 5 1588.1 129.39 HUMAN 1 -2.3684 -18.771 RSISQSISGQK____-p Q8WXI9;S590-p RSISQSISGQK____ 0.568633177625559 0.813981090249684 0.093 0.0283333333333333 4.50999651191145 1.25120343409391 0.093 0.0283333333333334 0.353997625400786 0.7496864417294 1.01344431950238 0.335720804356082 Q8WXI9 GATAD2B Q8WXI9.S590.p_GATAD2B Q8WXI9_S590s _1_1_590_590 Q8WXI9 Q8WXI9|A0A0U1RRM1 Transcriptional repressor p66-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10816.10816.2 10.34 10.34 1.168 4 1 1 0 786.9243 1492.8735 S590s TMT10 584 (R) SISQSIsGQK (-) S(0.0)IS(0.0)QS(0.0)IS(0.99)GQK K:TMT10,s:Phosphorylated S GATAD2B 65601.9 2 8 870.1 209.9 HUMAN 1 4.51 1.2512 RSIVRQKTVDIDDAQ-p Q6GYQ0-2;T754-p RSIVRQKTVDIDDAQ 0.755115471714797 0.406454312408655 -0.0473333333333334 0.0926666666666667 2.33100188986872 5.20523906242047 -0.0473333333333334 0.0926666666666667 0.584655192335104 0.301631083227398 -0.580918093531099 1.14130090232986 Q6GYQ0 RALGAPA1 Q6GYQ0.2.T754.p_RALGAPA1 Q6GYQ0-2_T754t _1_1_754_754 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-5|Q6GYQ0-7|Q6GYQ0-4 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18761.18761.2 16.66 16.66 99 1 1 1 0 1075.5839 2070.1959 T754t TMT10 752 (R) QKtVDIDDAQILPR (S) QKT(1.0)VDIDDAQILPR K:TMT10,t:Phosphorylated T RALGAPA1 236609.9 9 10 317.1 366.49 HUMAN 1 -2.331 5.2052 RSKEAENSRLCMQIK-p Q5BJF6-4;S356-p RSKEAENSRLCMQIK 0.63378091608585 0.0110905751621127 -0.092 -0.422 3.68719589223789 27.3819612622717 -0.0920000000000001 -0.422 0.427839039682954 0.00182727483735504 -0.856843732625708 -5.6655053181718 Q5BJF6 ODF2 Q5BJF6.4.S356.p_ODF2 Q5BJF6-4_S356s _1_1_356_356 Q5BJF6-4 Q5BJF6|Q5BJF6-4|Q5BJF6-3|Q5BJF6-2 Isoform 4 of Outer dense fiber protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13463.13463.3 10.13 10.13 99 1 1 1 0 673.0037 1937.0349 S356s TMT10 352 (K) EAENsRLCMQIK (N) EAENS(1.0)RLCMQIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ODF2 96031.2 1 8 853.1 211.96 HUMAN 1 -3.6872 -27.382 RSKKRKGSDDAPYSP-p O75151;S899-p RSKKRKGSDDAPYSP 0.34217424614225 0.0534293002302108 -0.166 0.238333333333333 8.65222422947583 16.9645162088442 -0.166 0.238333333333333 0.136388444731883 0.0201163127547013 -1.7481618401895 3.25317680781779 O75151 PHF2 O75151.S899.p_PHF2 O75151_S899s _1_1_899_899 O75151 O75151|A0A087WW48|E7ET14 Lysine-specific demethylase PHF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5710.5710.2 12.98 12.98 4.091 4 1 1 0 837.3907 1593.807 S899s Hydrogen 897 (R) KGsDDAPYSPTAR (V) KGS(0.99)DDAPY(0.0)S(0.0)PT(0.0)AR K:TMT10-Lys-Only,s:Phosphorylated S PHF2 121742.7 3 10 376.2 336.84 HUMAN 1 -8.6522 16.9645 RSKLRSVSVDLNVDP-p Q9Y5X3;S22-p RSKLRSVSVDLNVDP 0.889554663153291 0.72763551888443 -0.0206666666666667 0.0336666666666667 0.991865696369856 1.9009572160692 -0.0206666666666667 0.0336666666666667 0.795817399814457 0.645511937910833 -0.27183677658459 0.486699353578526 Q9Y5X3 SNX5 Q9Y5X3.S22.p_SNX5 Q9Y5X3_S22s _1_1_22_22 Q9Y5X3 Q9Y5X3 Sorting nexin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27953.27953.4 24.58 21.78 1.485 4 1 1 0 873.4675 3410.8783 S22s Hydrogen 20 (R) SVsVDLNVDPSLQIDIPDALSERDKVK (F) S(0.0)VS(0.99)VDLNVDPS(0.0)LQIDIPDALS(0.0)ERDKVK K:TMT10-Lys-Only,s:Phosphorylated S SNX5 47100.9 25 1 2397.1 85.28 HUMAN 1 -0.9919 1.901 RSKLVRLSSDSFARL-p Q9HB09;S242-p RSKLVRLSSDSFARL 0.219245224336186 0.00719792492613561 0.553 -0.881666666666667 12.6886056794888 30.6663813925711 0.553 -0.881666666666667 0.0538442624014719 0.000857752239729962 2.4551038104741 -6.62664972116689 Q9HB09 BCL2L12 Q9HB09.S242.p_BCL2L12 Q9HB09_S242s _1_1_242_242 Q9HB09 Q9HB09|Q9HB09-3|A0A087WSV0 Bcl-2-like protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14435.14435.4 14.07 14.07 1.107 4 1 1 0 501.7813 1924.138 S242s TMT10 236 (R) SKLVRLsSDSFAR (L) S(0.0)KLVRLS(0.99)S(0.0)DS(0.0)FAR K:TMT10,s:Phosphorylated S BCL2L12 37277.2 7 5 1874.1 109.69 HUMAN 1 12.6886 -30.6664 RSKNRDFSLPVPKFK-p O15047;S75-p RSKNRDFSLPVPKFK 0.39120743112417 0.137621195265172 -0.142666666666667 -0.191666666666667 7.51661977164161 11.3514587302654 -0.142666666666667 -0.191666666666667 0.177148721704743 0.0732578429662833 -1.55117555050157 -2.21676396688166 O15047 SETD1A O15047.S75.p_SETD1A O15047_S75s _1_1_75_75 O15047 O15047 Histone-lysine N-methyltransferase SETD1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18755.18755.3 10.41 4.86 99 1 1 1 0 570.9832 1630.9681 S75s TMT10 71 (K) NRDFsLPVPK (F) NRDFS(1.0)LPVPK K:TMT10,s:Phosphorylated S SETD1A 186829.5 1 1 570.2 269.37 HUMAN 1 -7.5166 -11.3515 RSKRPPKSPEEEGQM-p Q9BRL6;S273-p RSKRPPKSPEEEGQM 0.425998757587894 0.247471402894631 0.152 0.189666666666667 6.82706105455544 7.99069978317311 0.152 0.189666666666667 0.207631812232094 0.158829080504432 1.43070589992913 1.63303025027579 Q9BRL6 SRSF8 Q9BRL6.S273.p_SRSF8 Q9BRL6_S273s_1_1_273_273 Q9BRL6 Q9BRL6|Q9BRL6-2 Serine/arginine-rich splicing factor 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.4976.4976.3 8.94 8.94 1.113 4 1 1 0 853.1038 2461.3324 S273s M280m TMT10 267 (R) SKRPPKsPEEEGQmSS (-) S(0.0)KRPPKS(0.99)PEEEGQM(1.0)S(0.0)S(0.0) K:TMT10,s:Phosphorylated S,m:Oxidized methionine SRSF8 32401.1 5 6 1728.1 119.22 HUMAN 1 6.8271 7.9907 RSKSISSSNPDLAVA-p Q96HP0;S884-p RSKSISSSNPDLAVA 0.139661670983594 0.063731285855024 0.383 -0.267666666666667 17.4946518688555 15.9190071003383 0.383 -0.267666666666667 0.017804706259409 0.0255917090688387 3.36070483773569 -3.0505122280218 Q96HP0 DOCK6 Q96HP0.S884.p_DOCK6 Q96HP0_S884s _1_1_884_884 Q96HP0 Q96HP0 Dedicator of cytokinesis protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18849.18849.2 18.88 18.88 1.164 6 1 1 0 1256.0908 2431.215 S884s TMT10 880 (K) SISSsNPDLAVAPGSVDDEVSR (I) S(0.0)IS(0.0)S(0.0)S(0.99)NPDLAVAPGS(0.0)VDDEVS(0.0)R s:Phosphorylated S DOCK6 231436.7 3 2 1743.1 118.18 HUMAN 1 17.4947 -15.919 RSKSSRFSGGFGARD-p A0A0D9SF53;S594-p RSKSSRFSGGFGARD 0.505955843363506 0.00309831083212838 -0.116666666666667 -0.832666666666667 5.46146823305275 37.6968692827607 -0.116666666666667 -0.832666666666667 0.284349963404314 0.000169946831400018 -1.18799273733667 -9.14216969283918 A0A0D9SF53 NotFound A0A0D9SF53.S594.p_NotFound A0A0D9SF53_S594s _1_1_594_594 A0A0D9SF53 A0A0D9SF53|O00571|A0A0D9SG12|O00571-2|A0A0D9SFB3 ATP-dependent RNA helicase DDX3X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8815.8815.3 13.06 13.06 3.148 3 1 1 0 479.8997 1357.7174 S594s TMT10 590 (K) SSRFsGGFGAR (D) S(0.0)S(0.0)RFS(0.99)GGFGAR s:Phosphorylated S DDX3X 82160.2 4 12 1042.1 184.93 HUMAN 1 -5.4615 -37.6969 RSLAAETTEEEEEEE-p O60333-2;T682-p RSLAAETTEEEEEEE 0.356019622503244 0.733647766538202 0.157 -0.043 8.33688534860892 1.85443575505934 0.157 -0.043 0.146659927219369 0.652463805023987 1.69355662563985 -0.476265063128703 O60333 KIF1B O60333.2.T682.p_KIF1B O60333-2_T682t _1_1_682_682 O60333-2 O60333-4|Q4R9M9|A0A087WWA3|O60333-2 Isoform 2 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33319.33319.3 18.85 18.85 1.175 4 1 1 0 1353.9479 3979.8348 T682t TMT10 676 (R) SLAAETtEEEEEEEEVPWTQHEFELAQWAFR (K) S(0.0)LAAET(0.0)T(0.99)EEEEEEEEVPWT(0.0)QHEFELAQWAFR t:Phosphorylated T KIF1B 200628.3 1 2 606.1 262.24 HUMAN 1 8.3369 -1.8544 RSLARELSGTIKEIL-p P30050;S126-p RSLARELSGTIKEIL 0.0636603099033149 0.018662450602294 1.03433333333333 -0.566333333333333 25.8235630858255 23.7899653697317 1.03433333333333 -0.566333333333333 0.00261603585107605 0.00417833698403299 5.25542986234632 -4.73815276296565 P30050 RPL12 P30050.S126.p_RPL12 P30050_S126s _1_1_126_126 P30050 P30050|P30050-2 60S ribosomal protein L12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34307.34307.3 18.9 18.9 1.207 4 1 1 0 981.5068 2862.5395 S126s TMT10 124 (R) ELsGTIKEILGTAQSVGCNVDGR (H) ELS(0.99)GT(0.0)IKEILGT(0.0)AQS(0.0)VGCNVDGR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RPL12 17989.4 3 4 1867.1 110.2 HUMAN 1 25.8236 -23.79 RSLATMDSPPHQKQP-p Q14676;S1820-p RSLATMDSPPHQKQP 0.787969297282557 0.0521023459859068 0.038 -0.321 1.99449536468094 17.1220098157525 0.038 -0.321 0.631757583091008 0.0193998788770198 0.507582654126919 -3.28417943837424 Q14676 MDC1 Q14676.S1820.p_MDC1 Q14676_S1820s _1_1_1820_1820 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8556.8761.4 18.77 18.77 3.766 3 1 1 0 590.5554 2279.2331 S1820s TMT10 1814 (R) SLATMDsPPHQKQPQR (G) S(0.0)LAT(0.0)MDS(0.99)PPHQKQPQR K:TMT10,s:Phosphorylated S MDC1 227803.2 13 55 6.1 1662.62 HUMAN 1 1.9945 -17.122 RSLENRMSPSKSPFL-p Q8NFD5-3;S1608-p RSLENRMSPSKSPFL 0.408116983785071 0.0392872253413521 -0.164666666666667 -0.676666666666667 7.18195305367333 18.8696583704092 -0.164666666666667 -0.676666666666667 0.191339526383379 0.0129728131516651 -1.49282705563506 -3.63729538894052 Q8NFD5 ARID1B Q8NFD5.3.S1608.p_ARID1B Q8NFD5-3_S1608s _1_1_1608_1608 Q8NFD5-3 Q8NFD5-3|Q8NFD5-2|A0A1B0GVK1|Q8NFD5-4|A0A1B0GWJ2 Isoform 3 of AT-rich interactive domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20060.20060.4 12.99 7.06 1.453 5 1 1 0 701.6262 2723.5191 S1608s TMT10 1602 (R) SLENRMsPSKSPFLPSMK (M) S(0.0)LENRMS(0.99)PS(0.0)KS(0.0)PFLPS(0.0)MK K:TMT10,s:Phosphorylated S ARID1B 242543.1 13 13 656.1 253.59 HUMAN 1 -7.182 -18.8697 RSLEPSPSPGPQEED-p A0A0G2JPP5;S1606-p RSLEPSPSPGPQEED 0.761476943047114 0.336107286565258 0.0433333333333333 0.124333333333333 2.26641756876783 6.27401368321135 0.0433333333333333 0.124333333333333 0.593414621728793 0.235829772303427 0.567025907933757 1.33290281605465 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1606.p_SCRIB A0A0G2JPP5_S1606s _1_1_1606_1606 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30630.30630.5 24.54 24.54 1.257 6 1 1 0 893.8411 4385.2132 S1606s TMT10 1600 (R) SLEPSPsPGPQEEDGEVALVLLGRPSPGAVGPEDVALCSSR (R) S(0.0)LEPS(0.0)PS(0.99)PGPQEEDGEVALVLLGRPS(0.0)PGAVGPEDVALCS(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S SCRIB 178690.9 7 42 22.1 1004.81 HUMAN 1 2.2664 6.274 RSLERTTSGDDACNL-p Q96N67-6;S452-p RSLERTTSGDDACNL 0.330875085214081 0.111529287647724 -0.227333333333333 0.223333333333333 8.97680715172199 12.5761736936165 -0.227333333333333 0.223333333333333 0.126566649882504 0.0552564055701924 -1.80434795560332 2.43368520713652 Q96N67 DOCK7 Q96N67.6.S452.p_DOCK7 Q96N67-6_S452s _1_1_452_452 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3|Q96N67-4|Q96N67-7|A0A1B0GUE9 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30451.30451.3 17.93 17.93 1.63 8 1 1 0 1025.1572 2993.4876 S452s Hydrogen 450 (R) TTsGDDACNLTSFRPATLTVTNFFK (Q) T(0.0)T(0.0)S(0.99)GDDACNLT(0.0)S(0.0)FRPAT(0.0)LT(0.0)VT(0.0)NFFK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S DOCK7 243551.1 9 10 345.1 352.4 HUMAN 1 -8.9768 12.5762 RSLEVWGSQEALEEA-p P23025;S196-p RSLEVWGSQEALEEA 0.0848925536936968 0.162481590731178 0.347666666666667 0.233666666666667 22.9196951027461 10.3757577340389 0.347666666666667 0.233666666666667 0.00510540841332591 0.0917115907897529 4.53546895614076 2.04621201960227 P23025 XPA P23025.S196.p_XPA P23025_S196s _1_1_196_196 P23025 P23025|F2Z2T2 DNA repair protein complementing XP-A cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24236.24236.3 15.65 15.65 5.83 2 1 1 0 738.7065 2134.1432 S196s TMT10 190 (R) SLEVWGsQEALEEAK (E) S(0.0)LEVWGS(0.99)QEALEEAK K:TMT10,s:Phosphorylated S XPA 31766.8 1 1 5881.1 15.65 HUMAN 1 22.9197 10.3758 RSLGLSLSGGDQEDA-p Q9UJ70-2;S122-p RSLGLSLSGGDQEDA 0.250463232223352 0.255159479746612 0.202333333333333 0.111 11.4756164914529 7.81440169531571 0.202333333333333 0.111 0.0711931732405842 0.165409264472636 2.23965359957065 1.60245134531952 Q9UJ70 NAGK Q9UJ70.2.S122.p_NAGK Q9UJ70-2_S122s _1_1_122_122 Q9UJ70-2 Q9UJ70-2 Isoform 2 of N-acetyl-D-glucosamine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18380.18380.3 18.9 18.9 2.013 3 1 1 0 624.2969 1790.9082 S122s TMT10 116 (R) SLGLSLsGGDQEDAGR (I) S(0.0)LGLS(0.0)LS(0.99)GGDQEDAGR s:Phosphorylated S NAGK 42436.3 2 1 5484.1 18.9 HUMAN 1 11.4756 7.8144 RSLLNARTPENHENL-p Q7LBC6;T614-p RSLLNARTPENHENL 0.43957470059203 0.515311703470183 -0.111 0.0636666666666667 6.57491599022259 3.86508053687097 -0.111 0.0636666666666667 0.220043427435175 0.410669024234683 -1.38637947780936 0.89110294931688 Q7LBC6 KDM3B Q7LBC6.T614.p_KDM3B Q7LBC6_T614t _1_1_614_614 Q7LBC6 Q7LBC6|Q7LBC6-2 Lysine-specific demethylase 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16580.16580.3 8.89 5.39 99 1 1 1 0 658.3314 1893.0068 T614t Hydrogen 614 (R) tPENHENLFLQPPK (L) T(1.0)PENHENLFLQPPK K:TMT10-Lys-Only,t:Phosphorylated T KDM3B 193289 4 8 305.1 374.1 HUMAN 1 -6.5749 3.8651 RSLNCNTTFGDGPDM-p Q9NYQ6;T2743-p RSLNCNTTFGDGPDM 0.56125599376124 0.0944658600620255 0.078 0.185333333333333 4.61778221511716 13.5515841050541 0.078 0.185333333333333 0.345320036774039 0.0441409412283666 1.03352463909169 2.60944573780108 Q9NYQ6 CELSR1 Q9NYQ6.T2743.p_CELSR1 Q9NYQ6_T2743tS2764s_2_2_2743_2764 Q9NYQ6 Q9NYQ6 Cadherin EGF LAG seven-pass G-type receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30276.30276.5 14.31 14.31 1.131 8 2 2 0 927.0355 4471.2121 T2743t S2764s TMT10 2737 (R) SLNCNTtFGDGPDMLRTDLGESTASLDsIVRDEGIQK (L) S(0.0)LNCNT(0.0)T(0.99)FGDGPDMLRT(0.0)DLGES(0.0)T(0.0)AS(0.0)LDS(0.99)IVRDEGIQK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S CELSR1 334558.1 6 10 1317.1 154.7 HUMAN 1 4.6178 13.5516 RSLQLPASPAPDPSP-p Q5VTI5;S868-p RSLQLPASPAPDPSP 0.653324093094854 0.636520349041465 0.0743333333333333 0.0663333333333334 3.46653362797149 2.67080400444188 0.0743333333333333 0.0663333333333334 0.450138995234046 0.540654222977914 0.813677123478904 0.652631283587994 Q5VTI5 NotFound Q5VTI5.S868.p_NotFound Q5VTI5_S868s _1_1_868_868 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18353.18353.3 16.84 11.52 3.894 4 1 1 0 844.1222 2450.3808 S868s TMT10 862 (R) SLQLPAsPAPDPSPRPAYK (V) S(0.0)LQLPAS(0.99)PAPDPS(0.0)PRPAY(0.0)K K:TMT10,s:Phosphorylated S PLEKHA6 119745.7 4 27 52.1 743.36 HUMAN 1 3.4665 2.6708 RSLRDPASPPGRLVK-p O75064;S953-p RSLRDPASPPGRLVK 0.365755403490374 0.0330183593605983 0.126 -0.281 8.10619973852059 19.9746291064362 0.126 -0.281 0.154660719468591 0.0100585896109636 1.65357855445864 -3.86989226180669 O75064 DENND4B O75064.S953.p_DENND4B O75064_S953s _1_1_953_953 O75064 O75064 DENN domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7260.7260.3 9.94 9.94 5.149 2 1 1 0 487.9196 1381.7749 S953s TMT10 947 (R) SLRDPAsPPGR (L) S(0.0)LRDPAS(0.99)PPGR s:Phosphorylated S DENND4B 165840.7 2 4 1759.1 117.11 HUMAN 1 8.1062 -19.9746 RSLRKINSAPPTETK-p Q9NRL2;S1320-p RSLRKINSAPPTETK 0.541053998664189 0.00162286863808758 0.0946666666666667 -0.879 4.92122165641301 44.5712984238372 0.0946666666666667 -0.879 0.32201628424159 3.49035947505535e-05 1.08960158648574 -12.3917425869488 Q9NRL2 BAZ1A Q9NRL2.S1320.p_BAZ1A Q9NRL2_S1320s _1_1_1320_1320 Q9NRL2 Q9NRL2|Q9NRL2-2 Bromodomain adjacent to zinc finger domain protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10685.10685.2 11.75 11.75 3.3 3 1 1 0 798.4277 1515.8783 S1320s TMT10 1318 (K) INsAPPTETK (S) INS(0.99)APPT(0.0)ET(0.0)K K:TMT10,s:Phosphorylated S BAZ1A 180353.8 2 6 567.1 270.71 HUMAN 1 4.9212 -44.5713 RSLRRSNSISKSPGP-p P53671-3;S268-p RSLRRSNSISKSPGP 0.124587233090732 0.00387979257248964 0.570333333333333 -1.03933333333333 18.8168118467365 35.6214635214971 0.570333333333333 -1.03933333333333 0.0131316353786129 0.000274065044921857 3.629500371398 -8.32583305236765 P53671 LIMK2 P53671.3.S268.p_LIMK2 P53671-3_S268s _1_1_268_268 P53671-3 P53671-3 Isoform 3 of LIM domain kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.4319.4319.3 7.54 2.98 1.843 3 1 1 0 443.9146 1249.7629 S268s TMT10 265 (R) RSNsISK (S) RS(0.0)NS(0.99)IS(0.0)K K:TMT10,s:Phosphorylated S LIMK2 79253.5 12 2 2030.1 101.67 HUMAN 1 18.8168 -35.6215 RSLSRSNSLPHPAGG-p Q09019;S495-p RSLSRSNSLPHPAGG 0.330875085214081 0.0175936501308428 -0.137666666666667 -0.342666666666667 8.97822899778133 24.1820425442491 -0.137666666666667 -0.342666666666667 0.126525219736687 0.00381764679645473 -1.80459408761032 -4.83377447211669 Q09019 DMWD Q09019.S495.p_DMWD Q09019_S495s _1_1_495_495 Q09019 Q09019|G5E9A7 Dystrophia myotonica WD repeat-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7764.7764.3 14.46 14.46 2.105 2 1 1 0 553.9599 1579.8957 S495s TMT10 493 (R) SNsLPHPAGGGK (A) S(0.0)NS(0.99)LPHPAGGGK K:TMT10,s:Phosphorylated S DMWD 71349.7 2 1 5299.1 20.84 HUMAN 1 -8.9782 -24.182 RSLSRTPSPPPFRGR-p Q7L4I2;S222-p RSLSRTPSPPPFRGR 0.839353804661943 0.0079657699052288 -0.035 0.522 1.46959292304352 29.926305965119 -0.035 0.522 0.712919851063564 0.00101711346442488 -0.387849401352693 6.39962227704156 Q7L4I2 RSRC2 Q7L4I2.S222.p_RSRC2 Q7L4I2_T220tS222s_2_2_220_222 Q7L4I2 Q7L4I2|Q7L4I2-2 Arginine/serine-rich coiled-coil protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13293.13293.3 8.06 4.53 1.174 4 2 2 0 577.6122 1570.8903 T220t S222s TMT10 216 (R) SLSRtPsPPPFR (G) S(0.0)LS(0.0)RT(0.99)PS(0.99)PPPFR t:Phosphorylated T,s:Phosphorylated S RSRC2 50615.9 1 11 1070.1 180.75 HUMAN 1 -1.4696 29.9263 RSLSSFRSDASGDRG-p Q8TDM6;S897-p RSLSSFRSDASGDRG 0.322409753465923 0.045408253461249 0.171666666666667 0.243333333333333 9.2021916960076 17.9682984314511 0.171666666666667 0.243333333333333 0.120165785693836 0.0159650453620994 1.84336901380328 3.45303172051696 Q8TDM6 DLG5 Q8TDM6.S897.p_DLG5 Q8TDM6_S897s _1_1_897_897 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19849.19849.4 12.79 5.84 1.618 5 1 1 0 635.0656 2457.2684 S897s TMT10 891 (R) SLSSFRsDASGDRGFGLVDVR (G) S(0.0)LS(0.0)S(0.0)FRS(0.99)DAS(0.0)GDRGFGLVDVR s:Phosphorylated S DLG5 215575.4 1 17 34.1 890.58 HUMAN 1 9.2022 17.9683 RSLTGCWSAGTISKV-p Q6KB66;S51-p RSLTGCWSAGTISKV 0.480385007398323 0.0507442801508768 0.096 -0.293666666666667 5.86160052430827 17.2931164002259 0.096 -0.293666666666667 0.259322349408224 0.0186504089884509 1.25986937482563 -3.31800842993324 Q6KB66 KRT80 Q6KB66.S51.p_KRT80 Q6KB66_S51s _1_1_51_51 Q6KB66 Q6KB66 Keratin, type II cytoskeletal 80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21150.21150.3 11.56 8.28 2.34 5 1 1 0 635.9902 1825.9882 S51s TMT10 45 (R) SLTGCWsAGTISK (V) S(0.0)LT(0.0)GCWS(0.99)AGT(0.0)IS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KRT80 51037.9 1 54 69.3 672.47 HUMAN 1 5.8616 -17.2931 RSLYRTLSDESICSN-p Q9P2F8;S1488-p RSLYRTLSDESICSN 0.688325849910063 0.0283447568358296 -0.054 -0.324666666666667 3.04422873943694 20.9642267762301 -0.054 -0.324666666666667 0.4961090232312 0.00800898208814132 -0.7293814249906 -4.08494800032406 Q9P2F8 SIPA1L2 Q9P2F8.S1488.p_SIPA1L2 Q9P2F8_S1488s _1_1_1488_1488 Q9P2F8 Q9P2F8|Q9P2F8-2 Signal-induced proliferation-associated 1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10357.10357.2 14.8 14.8 2.464 4 1 1 0 795.8539 1510.7369 S1488s TMT10 1486 (R) TLsDESICSNR (R) T(0.0)LS(0.99)DES(0.0)ICS(0.0)NR C:Carbamidomethylation,s:Phosphorylated S SIPA1L2 192488.1 4 12 322.1 363.46 HUMAN 1 -3.0442 -20.9642 RSMGTGVSADFSGFQ-p Q7L0X0;S756-p RSMGTGVSADFSGFQ 0.100054229677911 0.206930708045146 0.307666666666667 0.259 21.1526483680137 8.99993087555876 0.307666666666667 0.259 0.00766893687860816 0.125894544962836 4.13080455875067 1.80770061629174 Q7L0X0 TRIL Q7L0X0.S756.p_TRIL Q7L0X0_S756s _1_1_756_756 Q7L0X0 Q7L0X0 TLR4 interactor with leucine rich repeats HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14524.14524.4 19.54 19.54 2.904 5 1 1 0 584.0233 2253.1032 S756s TMT10 750 (R) SMGTGVsADFSGFQSHRPR (T) S(0.0)MGT(0.0)GVS(0.99)ADFS(0.0)GFQS(0.0)HRPR s:Phosphorylated S TRIL 89691 4 1 3227.1 56.63 HUMAN 1 21.1526 8.9999 RSMSIDDTPRGSWAC-p Q96N67-6;T186-p RSMSIDDTPRGSWAC 0.207841226704015 0.17459998891911 -0.239333333333333 -0.235 13.1647219901362 9.96865591097319 -0.239333333333333 -0.235 0.0482533868060105 0.10072433502837 -2.54079174900929 -1.9754693768183 Q96N67 DOCK7 Q96N67.6.T186.p_DOCK7 Q96N67-6_T186t _1_1_186_186 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3|Q96N67-4|Q96N67-7|A0A1B0GUE9 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30229.30229.3 14.46 10.92 2 5 1 1 0 942.1202 2744.3788 T186t TMT10 180 (R) SMSIDDtPRGSWACSIFDLK (N) S(0.0)MS(0.0)IDDT(0.99)PRGS(0.0)WACS(0.0)IFDLK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T DOCK7 243551.1 2 5 345.1 352.4 HUMAN 1 -13.1647 -9.9687 RSMVSSVSL______-p Q5SRH9;S612-p RSMVSSVSL______ 0.126511809207966 0.0336752713788425 -0.365 -0.280666666666667 18.6586242011166 19.8519172473602 -0.365 -0.280666666666667 0.0136187604203149 0.0103468529106494 -3.59680641863759 -3.84367930182516 Q5SRH9 TTC39A Q5SRH9.S612.p_TTC39A Q5SRH9_S612s _1_1_612_612 Q5SRH9 Q5SRH9|Q5SRH9-4|Q5SRH9-6|Q5SRH9-5|D3DQ30|Q5SRH9-2 Tetratricopeptide repeat protein 39A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21402.21402.2 8.86 8.86 2.565 4 1 1 0 559.7721 1038.5703 S612s TMT10 606 (R) SMVSSVsL (-) S(0.0)MVS(0.0)S(0.0)VS(0.99)L s:Phosphorylated S TTC39A 70747.1 2 2 5945.1 15.1 HUMAN 1 -18.6586 -19.8519 RSNAKPLSPKDVVAS-p A0A0J9YWL0;S150-p RSNAKPLSPKDVVAS 0.0332552830156115 0.00170546265850223 -1.08066666666667 -0.897333333333333 34.478365934618 43.9684503472646 -1.08066666666667 -0.897333333333333 0.00035658527605845 4.01009780704049e-05 -7.91919470497608 -12.0688673303616 A0A0J9YWL0 NotFound A0A0J9YWL0.S150.p_NotFound A0A0J9YWL0_S150s _1_1_150_150 A0A0J9YWL0 A0A0J9YWL0 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9331.9331.3 7.5 7.5 7.502 2 1 1 0 570.3368 1629.0303 S150s TMT10 144 (R) SNAKPLsPK (D) S(0.0)NAKPLS(0.99)PK K:TMT10,s:Phosphorylated S CRYBG1 233643.7 1 2 79.1 640.71 HUMAN 1 -34.4784 -43.9685 RSNIQYRSLPRPAKS-p Q8NEY1;S672-p RSNIQYRSLPRPAKS 0.622522960003643 0.0892358487623822 0.0773333333333333 0.203333333333333 3.82487416320962 13.8880365348659 0.0773333333333333 0.203333333333333 0.414488593667539 0.0408504031123311 0.88350257647672 2.67079810440766 Q8NEY1 NAV1 Q8NEY1.S672.p_NAV1 Q8NEY1_S672s _1_1_672_672 Q8NEY1 Q8NEY1|Q8NEY1-3|Q8NEY1-2|A0A0A0MRJ3|Q8NEY1-4|Q8NEY1-7|Q8NEY1-5|Q8NEY1-6 Neuron navigator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5994.5994.3 7.51 7.51 99 1 1 1 0 359.8718 997.6356 S672s Hydrogen 672 (R) sLPRPAK (S) S(1.0)LPRPAK K:TMT10-Lys-Only,s:Phosphorylated S NAV1 203209.9 2 3 3927.1 40.57 HUMAN 1 3.8249 13.888 RSNKSSWSSSDEKRG-p Q9ULU4-19;S1207-p RSNKSSWSSSDEKRG 0.478855036748759 0.653261915150196 -0.116 -0.048 5.88517351229087 2.52583002830006 -0.116 -0.048 0.257918591697567 0.559006679400654 -1.26408108669115 -0.622260616134243 Q9ULU4 ZMYND8 Q9ULU4.19.S1207.p_ZMYND8 Q9ULU4-19_S1207s _1_1_1207_1207 Q9ULU4-19 Q9ULU4|Q9ULU4-20|Q9ULU4-5|Q9ULU4-9|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-18|Q9ULU4-21|Q9ULU4-8|Q9ULU4-4|Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-10|Q9ULU4-23|Q9ULU4-15|A0A087WYS3|Q9ULU4-17|Q9ULU4-6|Q9ULU4-3|Q9ULU4-13 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9997.9997.2 12.11 4.84 1.162 5 1 1 0 775.8607 1470.7477 S1207s TMT10 1204 (K) SSWsSSDEK (R) S(0.0)S(0.0)WS(0.99)S(0.0)S(0.0)DEK K:TMT10,s:Phosphorylated S ZMYND8 139738.7 4 21 57.1 712.18 HUMAN 1 -5.8852 -2.5258 RSNSISKSPGPSSPK-p P53671-3;S272-p RSNSISKSPGPSSPK 0.273201475250242 0.0196344528580471 -0.177333333333333 -0.323 10.6716598539319 23.434319051423 -0.177333333333333 -0.323 0.0856710351816672 0.00453490396870822 -2.09868142832935 -4.65251868630379 P53671 LIMK2 P53671.3.S272.p_LIMK2 P53671-3_S272s _1_1_272_272 P53671-3 P53671-3|B5MC51|P53671-2 Isoform 3 of LIM domain kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17410.17410.4 10.94 5.37 1.106 7 1 1 0 746.4118 2902.6605 S272s TMT10 266 (R) SNSISKsPGPSSPKEPLLFSR (D) S(0.0)NS(0.0)IS(0.0)KS(0.99)PGPS(0.0)S(0.0)PKEPLLFS(0.0)R K:TMT10,s:Phosphorylated S LIMK2 79253.5 2 3 2030.1 101.67 HUMAN 1 -10.6717 -23.4343 RSNTGQKTQPDVMSQ-p Q96Q15;T3550-p RSNTGQKTQPDVMSQ 0.0917156286406609 0.0908933218086992 0.523 -0.263333333333333 22.0903968727004 13.7759247726948 0.523 -0.263333333333333 0.00617959926330625 0.0419186726907792 4.34263141863346 -2.6503102119594 Q96Q15 SMG1 Q96Q15.T3550.p_SMG1 Q96Q15_T3550t _1_1_3550_3550 Q96Q15 Q96Q15|Q96Q15-2|Q96Q15-3|Q96Q15-4 Serine/threonine-protein kinase SMG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7093.7093.3 13.8 9.89 2.501 4 1 1 0 800.73 2320.208 T3550t TMT10 3544 (R) SNTGQKtQPDVMSQNAR (K) S(0.0)NT(0.0)GQKT(0.99)QPDVMS(0.0)QNAR K:TMT10,t:Phosphorylated T SMG1 414601.1 1 5 1337.1 152.31 HUMAN 1 22.0904 -13.7759 RSPCHQMSVDYPESE-p P15822;S2303-p RSPCHQMSVDYPESE 0.808989318004032 0.194694282046569 0.062 -0.268666666666667 1.7679652636377 9.34402012713465 0.062 -0.268666666666667 0.665584919922425 0.11630489332308 0.45678026261137 -1.86723248248575 P15822 HIVEP1 P15822.S2303.p_HIVEP1 P15822_S2303s _1_1_2303_2303 P15822 P15822|F5H212|P15822-3|P15822-2 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17392.17392.3 21.04 21.04 6.268 4 1 1 0 829.3694 2406.1267 S2303s TMT10 2297 (R) SPCHQMsVDYPESEEILR (S) S(0.0)PCHQMS(0.99)VDY(0.0)PES(0.0)EEILR C:Carbamidomethylation,s:Phosphorylated S HIVEP1 299483.8 1 31 82.1 631.69 HUMAN 1 1.768 -9.344 RSPEASQTDSPVESP-p O95049-3;T344-p RSPEASQTDSPVESP 0.932495418439431 0.0365538443686854 0.0133333333333333 0.319 0.598540318817815 19.3363056943489 0.0133333333333333 0.319 0.871256373514004 0.0116511670905889 0.169905096100823 3.73459238161537 O95049 TJP3 O95049.3.T344.p_TJP3 O95049-3_T344tS346s_2_2_344_346 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7550.7550.3 11.73 11.73 2.158 5 2 2 0 659.2811 1815.8922 T344t S346s TMT10 338 (R) SPEASQtDsPVESPR (L) S(0.0)PEAS(0.0)QT(0.99)DS(0.99)PVES(0.0)PR t:Phosphorylated T,s:Phosphorylated S TJP3 103593.6 6 26 125.1 544.41 HUMAN 1 0.5985 19.3363 RSPERRFSLDTDYRI-p Q9C0D7-2;S613-p RSPERRFSLDTDYRI 0.181336554886184 0.557400840840386 -0.258666666666667 0.093 14.6124173620077 3.42112631383101 -0.258666666666667 0.0930000000000001 0.0345746875262079 0.454870077324863 -2.80607085832877 0.80460107267032 Q9C0D7 ZC3H12C Q9C0D7.2.S613.p_ZC3H12C Q9C0D7-2_S613s _1_1_613_613 Q9C0D7-2 Q9C0D7-2|E9PP00 Isoform 2 of Probable ribonuclease ZC3H12C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13626.13626.3 9.85 4.63 2.153 3 1 1 0 494.5726 1401.7324 S613s TMT10 611 (R) RFsLDTDYR (I) RFS(0.99)LDT(0.0)DY(0.0)R s:Phosphorylated S ZC3H12C 100617.7 1 4 1811.1 113.32 HUMAN 1 -14.6124 3.4211 RSPFEIISPPASPPE-p E9PGC8;S2035-p RSPFEIISPPASPPE 0.842179784254459 0.689380297130335 -0.0296666666666667 0.045 1.44215717797123 2.21341635073966 -0.0296666666666667 0.0450000000000001 0.717437845217614 0.600701013829746 -0.381385287441086 0.555495442203501 E9PGC8 NotFound E9PGC8.S2035.p_NotFound E9PGC8_S2035sS2039s_2_2_2035_2039 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30714.31120.3 17.72 17.72 6.184 3 2 2 0 810.0456 2268.1896 S2035s S2039s TMT10 2029 (R) SPFEIIsPPAsPPEMVGQR (V) S(0.0)PFEIIS(0.99)PPAS(0.99)PPEMVGQR s:Phosphorylated S MAP1A 332906.7 4 52 20.1 1016.98 HUMAN 1 -1.4422 2.2134 RSPGEDASPGAGHEQ-p A0A0J9YWL0;S280-p RSPGEDASPGAGHEQ 0.129739749890184 0.0364324249202507 0.631333333333333 -0.44 18.3693921966077 19.3558618367908 0.631333333333334 -0.44 0.0145566278910449 0.0115988202022522 3.53741270763247 -3.73869919931454 A0A0J9YWL0 NotFound A0A0J9YWL0.S280.p_NotFound A0A0J9YWL0_S280s _1_1_280_280 A0A0J9YWL0 A0A0J9YWL0 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14681.14681.3 18.73 18.73 5.16 2 1 1 0 807.3747 2340.1418 S280s TMT10 274 (R) SPGEDAsPGAGHEQEAFLGVR (G) S(0.0)PGEDAS(0.99)PGAGHEQEAFLGVR s:Phosphorylated S CRYBG1 233643.7 2 8 79.1 640.71 HUMAN 1 18.3694 -19.3559 RSPGVVISDDEPGYD-p P00492;S11-p RSPGVVISDDEPGYD 0.834583820338347 0.845205650280789 0.044 -0.0223333333333333 1.51469039750452 1.02731099986026 0.044 -0.0223333333333333 0.705555140302442 0.789348703564492 0.398426797510421 -0.2806873941538 P00492 HPRT1 P00492.S11.p_HPRT1 P00492_S11s _1_1_11_11 P00492 P00492 Hypoxanthine-guanine phosphoribosyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32878.32878.4 11.48 11.48 1.947 4 1 1 0 936.9292 3664.7315 S11s TMT10 5 (R) SPGVVIsDDEPGYDLDLFCIPNHYAEDLER (V) S(0.0)PGVVIS(0.99)DDEPGY(0.0)DLDLFCIPNHY(0.0)AEDLER C:Carbamidomethylation,s:Phosphorylated S HPRT1 24807.2 1 2 4397.1 32.05 HUMAN 1 1.5147 -1.0273 RSPLDQRSPYGSRSP-p O14646;S1683-p RSPLDQRSPYGSRSP 0.175126391202982 0.976105737133176 0.224666666666667 0.00500000000000004 15.0630917541985 0.149356762818385 0.224666666666667 0.00500000000000006 0.0311667002828551 0.966193972188297 2.89029248110624 0.0443749507406874 O14646 CHD1 O14646.S1683.p_CHD1 O14646_S1683s _1_1_1683_1683 O14646 O14646 Chromodomain-helicase-DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7393.7393.3 10.85 6.49 2.604 4 1 1 0 557.94 1591.839 S1683s TMT10 1677 (R) SPLDQRsPYGSR (S) S(0.0)PLDQRS(0.99)PY(0.0)GS(0.0)R s:Phosphorylated S CHD1 197825.1 2 10 848.1 212.75 HUMAN 1 15.0631 0.1494 RSPLEHSSPEKEAPS-p Q13459;S1115-p RSPLEHSSPEKEAPS 0.592036231647899 0.0404650891952282 0.0711666666666667 -0.322166666666667 4.19485037150332 18.6761401175329 0.0711666666666667 -0.322166666666667 0.38064047167076 0.0135639440050589 0.954196954360014 -3.59733373596554 Q13459 MYO9B Q13459.S1115.p_MYO9B Q13459_S1115sS1122s_2_2_1115_1122 Q13459 Q13459|M0R0P8|Q13459-2 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11416.11416.4 11.39 11.39 1.2 4 2 2 0 674.8367 2536.3862 S1115s S1122s TMT10 1109 (R) SPLEHSsPEKEAPsPEK (T) S(0.0)PLEHS(0.0)S(0.99)PEKEAPS(0.99)PEK K:TMT10,s:Phosphorylated S MYO9B 244993.9 2 23 211.1 438.12 HUMAN 2 4.1949 -18.6761 RSPLKALSEFFKGDP-p O75369-8;S1480-p RSPLKALSEFFKGDP 0.810931912225789 0.213130469918843 0.0353333333333333 0.166333333333333 1.74811447310749 8.83209812506714 0.0353333333333333 0.166333333333333 0.668634147834305 0.130854959536922 0.452268288950301 1.77867190164285 O75369 FLNB O75369.8.S1480.p_FLNB O75369-8_S1480s _1_1_1480_1480 O75369-8 O75369-8 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29028.29028.2 12.16 12.16 99 1 1 1 0 690.3735 1299.7713 S1480s TMT10 1478 (K) ALsEFFK (G) ALS(1.0)EFFK K:TMT10,s:Phosphorylated S FLNB 283797.6 1 26 67.1 680.07 HUMAN 1 1.7481 8.8321 RSPLTAASPGELPTE-p Q92619;S99-p RSPLTAASPGELPTE 0.569012171547148 0.990509390928545 -0.092 0.00200000000000002 4.50606352728134 0.0602515356663761 -0.092 0.00200000000000004 0.354318351978948 0.986222363725724 -1.01270991892053 0.0180791372713004 Q92619 HMHA1 Q92619.S99.p_HMHA1 Q92619_S99s _1_1_99_99 Q92619 K7EM85|Q92619-2|K7ES98 Rho GTPase-activating protein 45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.37180.37180.4 30 30 3.171 5 1 1 0 899.205 3513.8274 S99s TMT10 93 (R) SPLTAAsPGELPTEGAGPDVVEDISHLLADVAR (F) S(0.0)PLT(0.0)AAS(0.99)PGELPT(0.0)EGAGPDVVEDIS(0.0)HLLADVAR s:Phosphorylated S ARHGAP45 125924.3 2 3 1815.1 113.01 HUMAN 1 -4.5061 0.0603 RSPQPVCSPAGSEGT-p Q6KC79;S280-p RSPQPVCSPAGSEGT 0.691992312130027 0.00628666004669093 0.0606666666666667 0.551666666666667 2.9985923540474 31.705277165105 0.0606666666666667 0.551666666666667 0.501349705994737 0.00067526195765572 0.720126375451937 6.95635088322112 Q6KC79 NIPBL Q6KC79.S280.p_NIPBL Q6KC79_S280s _1_1_280_280 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17064.17064.3 16.29 16.29 2.379 5 1 1 0 998.5031 2913.5293 S280s TMT10 266 (R) NAASFPLRSPQPVCsPAGSEGTPK (G) NAAS(0.0)FPLRS(0.0)PQPVCS(0.99)PAGS(0.0)EGT(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NIPBL 318099.5 5 3 50.1 752.87 HUMAN 1 2.9986 31.7053 RSPRLVASGDDSVDS-p Q9NR48;S1709-p RSPRLVASGDDSVDS 0.887539377298516 0.012924838006992 -0.0233333333333333 -0.417 1.0090312639831 26.2952537584358 -0.0233333333333333 -0.417 0.792678125315508 0.00234679213552399 -0.27614229320123 -5.37232099898587 Q9NR48 ASH1L Q9NR48.S1709.p_ASH1L Q9NR48_S1709s _1_1_1709_1709 Q9NR48 Q9NR48|Q9NR48-2 Histone-lysine N-methyltransferase ASH1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24468.24468.3 16.45 16.45 1.639 3 1 1 0 628.6491 1803.965 S1709s TMT10 1706 (R) LVAsGDDSVDSLLQR (M) LVAS(0.99)GDDS(0.0)VDS(0.0)LLQR s:Phosphorylated S ASH1L 336378.7 2 17 245.1 412 HUMAN 1 -1.009 -26.2953 RSPRRGPSPACSDSS-p Q5TZA2;S512-p RSPRRGPSPACSDSS 0.849753757037693 0.0213175688831904 0.0306666666666667 0.408666666666667 1.36892348694164 22.8543646979029 0.0306666666666667 0.408666666666667 0.729638347889181 0.00518278902224805 0.364019926052628 4.51506803805416 Q5TZA2 CROCC Q5TZA2.S512.p_CROCC Q5TZA2_S512s _1_1_512_512 Q5TZA2 Q5TZA2 Rootletin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17688.17688.5 20.5 20.5 2.2 6 1 1 0 600.7194 2919.5987 S512s TMT10 509 (R) RGPsPACSDSSTLALIHSALHKR (Q) RGPS(0.99)PACS(0.0)DS(0.0)S(0.0)T(0.0)LALIHS(0.0)ALHKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CROCC 228918.7 3 3 912.1 201.7 HUMAN 1 1.3689 22.8544 RSPSHENSI______-p Q5UIP0;S2471-p RSPSHENSI______ 0.517029486020493 0.185516494185612 0.122333333333333 -0.216333333333333 5.28971905686991 9.62149540063862 0.122333333333333 -0.216333333333333 0.295820382522544 0.109106458688712 1.15689550174384 -1.91527784042055 Q5UIP0 RIF1 Q5UIP0.S2471.p_RIF1 Q5UIP0_S2471s _1_1_2471_2471 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5671.5671.2 14.05 11.41 14.051 3 1 1 0 590.2662 1099.5581 S2471s TMT10 2465 (R) SPSHENsI (-) S(0.0)PS(0.0)HENS(0.99)I s:Phosphorylated S RIF1 276628.8 1 39 29.1 922.06 HUMAN 1 5.2897 -9.6215 RSPSSAGSPRSPGTP-p E7ERA6;S33-p RSPSSAGSPRSPGTP 0.278650239773871 0.155513481322637 0.255666666666667 0.246 10.4974768287358 10.6286873053757 0.255666666666667 0.246 0.0891768889023321 0.0865229402722682 2.06828752113818 2.09027273416222 E7ERA6 RNF223 E7ERA6.S33.p_RNF223 E7ERA6_S33s _1_1_33_33 E7ERA6 E7ERA6 RING finger protein 223 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3697.3697.2 8.27 4.32 3.391 4 1 1 0 577.7742 1074.5741 S33s TMT10 27 (R) SPSSAGsPR (S) S(0.0)PS(0.0)S(0.0)AGS(0.99)PR s:Phosphorylated S RNF223 27541.5 1 4 3068.1 61.62 HUMAN 1 10.4975 10.6287 RSPYGSRSPFEHSVE-p O14646;S1689-p RSPYGSRSPFEHSVE 0.371567802822301 0.906543460619518 0.162 -0.015 7.97282608647071 0.596222989576091 0.162 -0.015 0.159484099788284 0.871721386702509 1.6304462923631 -0.169268517217279 O14646 CHD1 O14646.S1689.p_CHD1 O14646_S1689s _1_1_1689_1689 O14646 O14646 Chromodomain-helicase-DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7884.7884.5 17.35 17.35 1.226 5 1 1 0 477.2387 2302.1981 S1689s TMT10 1683 (R) SPYGSRsPFEHSVEHK (S) S(0.0)PY(0.0)GS(0.0)RS(0.99)PFEHS(0.0)VEHK K:TMT10,s:Phosphorylated S CHD1 197825.1 3 11 848.1 212.75 HUMAN 1 7.9728 -0.5962 RSQALGQSAPSLTAS-p O15021;S206-p RSQALGQSAPSLTAS 0.731426286874222 0.771655781571801 0.0563333333333333 -0.0326666666666667 2.57766650203845 1.55713071222789 0.0563333333333333 -0.0326666666666667 0.552374154480703 0.698693863234328 0.633243984652865 -0.40828368493483 O15021 MAST4 O15021.S206.p_MAST4 O15021_S206s _1_1_206_206 O15021 O15021|J3QT34|O15021-4|E7EX28 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21226.21226.3 13.52 13.52 3.697 5 1 1 0 699.7179 2017.1694 S206s TMT10 200 (R) SQALGQsAPSLTASLK (E) S(0.0)QALGQS(0.99)APS(0.0)LT(0.0)AS(0.0)LK K:TMT10,s:Phosphorylated S MAST4 286597.7 2 4 121.99 549.41 HUMAN 1 2.5777 -1.5571 RSQDATFSPGSEQAE-p Q86WB0;S335-p RSQDATFSPGSEQAE 0.633204865850603 0.0302131588935149 -0.078 -0.317666666666667 3.69624344778584 20.5626229383615 -0.078 -0.317666666666667 0.426948660375459 0.00878491788057772 -0.85860188778045 -3.99687417280167 Q86WB0 ZC3HC1 Q86WB0.S335.p_ZC3HC1 Q86WB0_S335s _1_1_335_335 Q86WB0 Q86WB0|Q86WB0-2|C9J0I9 Nuclear-interacting partner of ALK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13974.13974.3 20.44 17.37 2.208 6 1 1 0 971.819 2833.4732 S335s TMT10 329 (R) SQDATFsPGSEQAEKSPGPIVSR (T) S(0.0)QDAT(0.0)FS(0.99)PGS(0.0)EQAEKS(0.0)PGPIVS(0.0)R K:TMT10,s:Phosphorylated S ZC3HC1 56401.6 5 5 624.1 258.98 HUMAN 1 -3.6962 -20.5626 RSQFFSQSVDSPSSE-p Q9UPQ0-4;S760-p RSQFFSQSVDSPSSE 0.571989583067721 0.0468054028585808 0.0833333333333333 0.279333333333333 4.46876459187312 17.7877847012213 0.0833333333333333 0.279333333333333 0.357374483595283 0.0166426135928967 1.00573909840858 3.41668799067937 Q9UPQ0 LIMCH1 Q9UPQ0.4.S760.p_LIMCH1 Q9UPQ0-4_S760s _1_1_760_760 Q9UPQ0-4 Q9UPQ0-4|Q9UPQ0-5 Isoform 4 of LIM and calponin homology domains-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17811.17824.3 17.5 17.5 2.731 6 1 1 0 733.3522 2118.0755 S760s TMT10 754 (R) SQFFSQsVDSPSSEK (S) S(0.0)QFFS(0.0)QS(0.99)VDS(0.0)PS(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S LIMCH1 121463.5 2 16 679.1 246.52 HUMAN 1 4.4688 17.7878 RSQKASVTP______-p Q9UIJ7;T226-p RSQKASVTP______ 0.131009621387088 0.00604775327324358 0.451 0.768666666666667 18.2478619087535 32.0255791853148 0.451 0.768666666666667 0.0149697245476424 0.000627252038601646 3.51260255048968 7.0606825959194 Q9UIJ7 AK3 Q9UIJ7.T226.p_AK3 Q9UIJ7_T226t _1_1_226_226 Q9UIJ7 Q9UIJ7|Q9UIJ7-3|Q9UIJ7-2 GTP:AMP phosphotransferase AK3, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7634.7634.2 8.04 8.04 2.06 3 1 1 0 678.371 1275.7673 T226t TMT10 220 (R) SQKASVtP (-) S(0.0)QKAS(0.0)VT(0.99)P K:TMT10,t:Phosphorylated T AK3 25564.9 1 1 7044.1 8.04 HUMAN 1 18.2479 32.0256 RSQMANSSREKIVIP-p Q8N9B8-2;S381-p RSQMANSSREKIVIP 0.327394528659194 0.620749587807368 -0.361666666666667 -0.048 9.07437851863558 2.81587292696001 -0.361666666666667 -0.048 0.123754827212101 0.522892854750882 -1.82123907419286 -0.682666791047228 Q8N9B8 RASGEF1A Q8N9B8.2.S381.p_RASGEF1A Q8N9B8-2_S375sS380sS381s_3_3_375_381 Q8N9B8-2 Q8N9B8-2 Isoform 2 of Ras-GEF domain-containing family member 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28559.28559.4 10.11 2.48 0 3 3 3 0 834.6858 3094.8054 S375s S380s S381s N391n TMT10 375 (R) sQMANssREKIVIPVFnLFVK (D) S(1.0)QMAN(0.50)S(1.0)S(1.0)REKIVIPVFN(0.50)LFVK K:TMT10,s:Phosphorylated S,n:Deamidated RASGEF1A 56158.6 1 1 6691.1 10.11 HUMAN 1 -9.0744 -2.8159 RSQNHSRSPSEERGH-p Q9H0G5;S291-p RSQNHSRSPSEERGH 0.79813572883131 0.0660128826966847 0.045 0.368666666666667 1.88759731903668 15.7010197823385 0.045 0.368666666666667 0.647500738519177 0.0269090286925117 0.483763222515876 3.00891413118663 Q9H0G5 NSRP1 Q9H0G5.S291.p_NSRP1 Q9H0G5_S291s _1_1_291_291 Q9H0G5 Q9H0G5|A0A024QZ33 Nuclear speckle splicing regulatory protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.1144.1287.5 16.6 12.79 1.694 6 1 1 0 453.0133 2181.0707 S291s TMT10 285 (R) SQNHSRsPSEERGHSTR (H) S(0.0)QNHS(0.0)RS(0.99)PS(0.0)EERGHS(0.0)T(0.0)R s:Phosphorylated S NSRP1 66617.1 5 4 900.1 203.68 HUMAN 1 1.8876 15.701 RSQPAPVSPQQKSVL-p Q13118;S249-p RSQPAPVSPQQKSVL 0.127638476804876 0.00767296279508775 -0.273333333333333 -0.460333333333333 18.5290978858102 30.1952080902407 -0.273333333333333 -0.460333333333333 0.0140310512654512 0.000956046885367377 -3.57014725701193 -6.48137511493397 Q13118 KLF10 Q13118.S249.p_KLF10 Q13118_S249s _1_1_249_249 Q13118 Q13118|Q13118-2 Krueppel-like factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8014.8014.3 14.56 14.56 14.56 2 1 1 0 568.9744 1624.9423 S249s TMT10 243 (R) SQPAPVsPQQK (S) S(0.0)QPAPVS(0.99)PQQK K:TMT10,s:Phosphorylated S KLF10 53410.1 4 2 2790.1 70.55 HUMAN 1 -18.5291 -30.1952 RSQSAAVTPSSTTSS-p Q16186;T217-p RSQSAAVTPSSTTSS 0.97902521233224 0.0249636637183794 0.00533333333333331 -0.447 0.181711318858366 21.8038016328955 0.00533333333333331 -0.447 0.959022658268694 0.00660115357553717 0.0538030017015668 -4.2727409585198 Q16186 ADRM1 Q16186.T217.p_ADRM1 Q16186_T217t _1_1_217_217 Q16186 Q16186|A0A087WX59 Proteasomal ubiquitin receptor ADRM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5321.5635.2 15.75 12.06 1.833 10 1 1 0 938.947 1796.9188 T217t TMT10 211 (R) SQSAAVtPSSTTSSTR (A) S(0.0)QS(0.0)AAVT(0.99)PS(0.0)S(0.0)T(0.0)T(0.0)S(0.0)S(0.0)T(0.0)R t:Phosphorylated T ADRM1 42437.8 1 2 3503.1 49.61 HUMAN 1 0.1817 -21.8038 RSQSGGYSDRSSGGS-p Q14011;S152-p RSQSGGYSDRSSGGS 0.198787967086859 0.864117024069509 0.385 0.0473333333333333 13.6572884735827 0.895169660419145 0.385 0.0473333333333334 0.0430795494585703 0.813735070982765 2.63020869948471 0.247348072706623 Q14011 CIRBP Q14011.S152.p_CIRBP Q14011_S152s _1_1_152_152 Q14011 Q14011-3|K7EQR7|K7EPM4 Cold-inducible RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4096.4096.2 10.8 6.88 3.503 4 1 1 0 633.2711 1185.5697 S152s TMT10 146 (R) SQSGGYsDR (S) S(0.0)QS(0.0)GGY(0.0)S(0.99)DR s:Phosphorylated S CIRBP 18647.7 1 4 2655.1 74.98 HUMAN 1 13.6573 0.8952 RSQSLPNSLDYTQTS-p Q96TC7;S50-p RSQSLPNSLDYTQTS 0.230234313621884 0.866328418655912 0.180666666666667 0.0256666666666667 12.2552826472389 0.877740655859616 0.180666666666667 0.0256666666666667 0.0594938035782248 0.817007295150095 2.37769815418991 0.242899843022088 Q96TC7 RMDN3 Q96TC7.S50.p_RMDN3 Q96TC7_S46sS50s_2_2_46_50 Q96TC7 Q96TC7 Regulator of microtubule dynamics protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15936.15936.2 12.42 8.37 1.641 7 2 2 0 1178.0126 2195.0778 S46s S50s TMT10 44 (R) SQsLPNsLDYTQTSDPGR (H) S(0.0)QS(0.99)LPNS(0.99)LDY(0.0)T(0.0)QT(0.0)S(0.0)DPGR s:Phosphorylated S RMDN3 52573.8 3 6 697.1 241.25 HUMAN 1 12.2553 0.8777 RSQSRSNSPLPVPPS-p Q13247;S303-p RSQSRSNSPLPVPPS 0.415666897037693 0.184402796560541 -0.111666666666667 -0.163666666666667 7.03504740355624 9.65287311872399 -0.111666666666667 -0.163666666666667 0.197922541773135 0.108321006843899 -1.467146691191 -1.92071408077394 Q13247 SRSF6 Q13247.S303.p_SRSF6 Q13247_S303s _1_1_303_303 Q13247 Q13247|Q13247-3 Serine/arginine-rich splicing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15406.15607.2 13.11 9.21 2.122 3 1 1 0 830.9559 1580.9412 S303s TMT10 301 (R) SNsPLPVPPSK (A) S(0.0)NS(0.99)PLPVPPS(0.0)K K:TMT10,s:Phosphorylated S SRSF6 39700.2 32 25 743.1 233.79 HUMAN 1 -7.035 -9.6529 RSRADLESPQRKHKC-p A0A087X1K6;S160-p RSRADLESPQRKHKC 0.995703835699076 0.820092241758375 -0.00100000000000001 0.0256666666666667 0.0349930871556913 1.20585400876574 -0.00100000000000002 0.0256666666666667 0.991974918205197 0.757555750345384 -0.0105310954228285 0.324713502252761 A0A087X1K6 NotFound A0A087X1K6.S160.p_NotFound A0A087X1K6_S160s _1_1_160_160 A0A087X1K6 Q9Y2Y9|A0A087X1K6 Krueppel-like factor 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5007.5007.2 9.48 3.78 99 1 1 1 0 676.8428 1272.7109 S160s Hydrogen 156 (R) ADLEsPQRK (H) ADLES(1.0)PQRK K:TMT10-Lys-Only,s:Phosphorylated S KLF13 31681 2 1 4960.1 24.66 HUMAN 1 -0.035 1.2059 RSRAEAESMYQIKYE-p P05787;S280-p RSRAEAESMYQIKYE 0.724309472221847 0.0359648549186556 0.0483333333333333 0.404333333333333 2.65161924877235 19.4366604739674 0.0483333333333333 0.404333333333333 0.543047820638374 0.0113850240562121 0.648718268274055 3.75569238014969 P05787 KRT8 P05787.S280.p_KRT8 P05787_S280s _1_1_280_280 P05787 P05787|P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29097.29097.3 18.72 18.72 5.786 4 1 1 0 1019.1907 2975.6003 S280s TMT10 276 (R) AEAEsMYQIKYEELQSLAGK (H) AEAES(0.99)MY(0.0)QIKY(0.0)EELQS(0.0)LAGK K:TMT10,s:Phosphorylated S KRT8 53703.3 17 22 69.1 672.47 HUMAN 1 2.6516 19.4367 RSRASPGSPGRPGSG-p Q96JH8;S818-p RSRASPGSPGRPGSG 0.146473317485752 0.571159824068409 0.6 -0.140333333333333 16.9893059616233 3.27927444476205 0.6 -0.140333333333333 0.0200018148958068 0.469972618148095 3.26052881671317 -0.776472131794815 Q96JH8 RADIL Q96JH8.S818.p_RADIL Q96JH8_S818s_1_1_818_818 Q96JH8 Q96JH8|Q96JH8-1|Q96JH8-2|Q96JH8-3 Ras-associating and dilute domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13562.13562.5 13.88 13.88 1.207 5 1 1 0 899.627 4398.1491 S818s M835m TMT10 814 (R) ASPGsPGRPGSGASQPVCPEGmHHVVLDGHLEAPSCPLAPR (D) AS(0.0)PGS(0.99)PGRPGS(0.0)GAS(0.0)QPVCPEGM(1.0)HHVVLDGHLEAPS(0.0)CPLAPR C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine RADIL 118765.4 1 6 1785.1 114.97 HUMAN 1 16.9893 -3.2793 RSRDVPESPQHAADT-p P13994;S306-p RSRDVPESPQHAADT 0.23427169248397 0.999097706837257 0.234333333333333 0.000333333333333371 12.0850160191175 0.00590894761719393 0.234333333333333 0.000333333333333314 0.0618726045354427 0.998640339706905 2.34742316531721 0.00178404438088628 P13994 CCDC130 P13994.S306.p_CCDC130 P13994_S306s _1_1_306_306 P13994 P13994 Coiled-coil domain-containing protein 130 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7091.7091.3 13.77 13.77 10.889 2 1 1 0 600.9508 1720.8703 S306s Hydrogen 302 (R) DVPEsPQHAADTPK (S) DVPES(0.99)PQHAADT(0.0)PK K:TMT10-Lys-Only,s:Phosphorylated S CCDC130 45258 1 3 3212.1 57.26 HUMAN 1 12.085 0.0059 RSREKIATAPKKEIL-p Q12955;T2508-p RSREKIATAPKKEIL 0.171158122502722 0.000952253650599092 -0.464333333333333 -2.19833333333333 15.284829930377 56.9823660875972 -0.464333333333333 -2.19833333333333 0.0296153593680537 2.00338026477544e-06 -2.93204393887413 -21.1982523554089 Q12955 ANK3 Q12955.T2508.p_ANK3 Q12955_T2508t _1_1_2508_2508 Q12955 Q12955|P07305 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9548.9548.3 7.76 3.52 99 1 1 1 0 499.312 1415.9553 T2508t TMT10 2506 (K) IAtAPKK (E) IAT(1.0)APKK K:TMT10,t:Phosphorylated T ANK3 482683.6 1 23 135.1 530.51 HUMAN 1 -15.2848 -56.9824 RSREPTDTNVLRYIQ-p Q8N6N2;T205-p RSREPTDTNVLRYIQ 0.148266672319898 0.00289691525155908 0.243666666666667 0.749333333333333 16.8107794241308 38.3601453687256 0.243666666666667 0.749333333333333 0.0208411681509064 0.000145876543109846 3.22545850487874 9.41769047847378 Q8N6N2 TTC9B Q8N6N2.T205.p_TTC9B Q8N6N2_T205t_1_1_205_205 Q8N6N2 Q8N6N2 Tetratricopeptide repeat protein 9B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10186.10186.2 7.93 0.39 1.207 3 1 1 0 799.3929 1516.8281 T205t N206n TMT10 199 (R) SREPTDtnVLR (Y) S(0.0)REPT(0.0)DT(0.99)N(1.0)VLR t:Phosphorylated T,n:Deamidated TTC9B 26217.2 1 1 7064.1 7.93 HUMAN 1 16.8108 38.3601 RSRERSPSPLRGNVV-p Q9Y2V2;S32-p RSRERSPSPLRGNVV 0.23797684518109 0.0659575173762657 0.177833333333333 0.209 11.9299526733084 15.7091056687247 0.177833333333333 0.209 0.0641216564123459 0.0268589748856282 2.31991628772876 3.01045326760833 Q9Y2V2 CARHSP1 Q9Y2V2.S32.p_CARHSP1 Q9Y2V2_S30sS32s_2_2_30_32 Q9Y2V2 Q9Y2V2|I3L3X8 Calcium-regulated heat-stable protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12964.12964.5 17.84 17.84 11.451 4 2 2 0 521.6735 2444.4047 S30s S32s TMT10 28 (R) ERsPsPLRGNVVPSPLPTRR (T) ERS(0.99)PS(0.99)PLRGNVVPS(0.0)PLPT(0.0)RR s:Phosphorylated S CARHSP1 16120 25 8 1307.1 155.77 HUMAN 2 11.93 15.7091 RSRGRASSHSSQTQG-p P02545;S404-p RSRGRASSHSSQTQG 0.00956415249523423 0.00129606731851265 -1.15 -1.307 48.4890438230688 47.2722404004477 -1.15 -1.307 1.41610552658181e-05 1.87402750172117e-05 -14.7415798171334 -13.9411095078744 P02545 LMNA P02545.S404.p_LMNA P02545_S404s _1_1_404_404 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4081.4081.2 15.52 15.52 1.152 7 1 1 0 1029.0067 1977.0402 S404s TMT10 402 (R) ASsHSSQTQGGGSVTK (K) AS(0.0)S(0.99)HS(0.0)S(0.0)QT(0.0)QGGGS(0.0)VT(0.0)K K:TMT10,s:Phosphorylated S LMNA 74423.5 36 20 60.1 706.83 HUMAN 1 -48.489 -47.2722 RSRHRSRSRSPDIQA-p Q9HCS5;S541-p RSRHRSRSRSPDIQA 0.331071537910901 0.42073562028855 0.183 0.0856666666666667 8.97092861963558 5.00538033044491 0.183 0.0856666666666667 0.126738084225074 0.315836244486448 1.80333034139912 1.10482048880546 Q9HCS5 EPB41L4A Q9HCS5.S541.p_EPB41L4A Q9HCS5_S541sS543s_2_2_541_543 Q9HCS5 Q9HCS5 Band 4.1-like protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18642.18642.3 11.72 11.72 99 2 2 2 0 769.0499 2145.2068 S541s S543s Hydrogen 541 (R) sRsPDIQAKEELWK (H) S(1.0)RS(1.0)PDIQAKEELWK K:TMT10-Lys-Only,s:Phosphorylated S EPB41L4A 79741.9 1 16 696.1 241.4 HUMAN 1 8.9709 5.0054 RSRHSSISPSTLTLK-p Q14004-2;S439-p RSRHSSISPSTLTLK 0.542135646907035 0.0142580161297992 0.123 0.422333333333333 4.90617638710359 25.5959739026585 0.123 0.422333333333334 0.323133780222053 0.00275678317612249 1.0868360577323 5.18964010905136 Q14004 CDK13 Q14004.2.S439.p_CDK13 Q14004-2_S437sS439s_2_2_437_439 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17162.17162.2 11.45 11.45 2 6 2 2 0 830.403 1499.8631 S437s S439s Hydrogen 435 (R) HSsIsPSTLTLK (S) HS(0.0)S(0.99)IS(0.99)PS(0.0)T(0.0)LT(0.0)LK K:TMT10-Lys-Only,s:Phosphorylated S CDK13 159173.6 6 21 145.1 520.12 HUMAN 1 4.9062 25.596 RSRHSSISPVRLPLN-p Q9NYV4-2;S385-p RSRHSSISPVRLPLN 0.552107161722498 0.131895871226618 -0.0913333333333333 0.207666666666667 4.76112530526253 11.5978940992522 -0.0913333333333334 0.207666666666667 0.334108457595302 0.0692166522188876 -1.06009552917013 2.26012493414796 Q9NYV4 CDK12 Q9NYV4.2.S385.p_CDK12 Q9NYV4-2_S383sS385s_2_2_383_385 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22256.22256.4 20.88 20.88 1.208 6 2 2 0 595.7913 2220.2095 S383s S385s Hydrogen 381 (R) HSsIsPVRLPLNSSLGAELSR (K) HS(0.0)S(0.99)IS(0.99)PVRLPLNS(0.0)S(0.0)LGAELS(0.0)R s:Phosphorylated S CDK12 163853.1 24 42 59.1 708.76 HUMAN 1 -4.7611 11.5979 RSRKDDDSLSEASHS-p Q8NDX6;S70-p RSRKDDDSLSEASHS 0.191125222863442 0.0118796517356686 0.211333333333333 0.627333333333333 14.0335227641378 26.8988887403092 0.211333333333333 0.627333333333334 0.0395046049882328 0.00204226044529439 2.69907540417658 5.53374853039537 Q8NDX6 ZNF740 Q8NDX6.S70.p_ZNF740 Q8NDX6_S70s _1_1_70_70 Q8NDX6 Q8NDX6 Zinc finger protein 740 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5152.5152.4 15.03 15.03 2 4 1 1 0 579.3034 2234.2232 S70s Hydrogen 66 (R) KDDDsLSEASHSKK (T) KDDDS(0.99)LS(0.0)EAS(0.0)HS(0.0)KK K:TMT10-Lys-Only,s:Phosphorylated S ZNF740 22484.2 3 2 2891.1 66.71 HUMAN 1 14.0335 26.8989 RSRKESYSIYVYKVL-p P33778;S39-p RSRKESYSIYVYKVL 0.306383440584975 0.00629476989233203 -0.229666666666667 -0.538 9.61970333506349 31.6946332915583 -0.229666666666667 -0.538 0.109151489487649 0.000676918948012233 -1.91570883377531 -6.95290591707846 P33778 HIST1H2BB P33778.S39.p_HIST1H2BB P33778_S39s _1_1_39_39 P33778 Q6DN03|Q6DRA6|P33778|P06899|P23527|Q16778 Histone H2B type 1-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20336.20336.2 13.02 13.02 2.751 5 1 1 0 845.4318 1609.8878 S39s TMT10 36 (K) ESYsIYVYK (V) ES(0.0)Y(0.0)S(0.99)IY(0.0)VY(0.0)K K:TMT10,s:Phosphorylated S HIST1H2BB 13949.9 10 1 2194.2 93.83 HUMAN 1 -9.6197 -31.6946 RSRKESYSVYVYKVL-p U3KQK0;S39-p RSRKESYSVYVYKVL 0.468752455569706 0.0574912329713743 0.107 -0.267333333333333 6.0727376240791 16.5265342387373 0.107 -0.267333333333333 0.24701665568936 0.022250848468144 1.297510840441 -3.16762453051268 U3KQK0 NotFound U3KQK0.S39.p_NotFound U3KQK0_S39s _1_1_39_39 U3KQK0 U3KQK0|Q5QNW6-2 Histone H2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18681.18681.2 15.41 15.41 2.973 5 1 1 0 838.4222 1595.8721 S39s TMT10 36 (K) ESYsVYVYK (V) ES(0.0)Y(0.0)S(0.99)VY(0.0)VY(0.0)K K:TMT10,s:Phosphorylated S HIST1H2BN 18803.6 5 5 2194.1 93.83 HUMAN 1 6.0727 -16.5265 RSRKSSGTPTMNGGK-p P61328;T229-p RSRKSSGTPTMNGGK 0.100718023880825 0.0016237919479163 0.305666666666667 1.76866666666667 21.0932862737262 44.508252309695 0.305666666666667 1.76866666666667 0.00777448039314488 3.54139825560634e-05 4.11760948726738 12.3575998234701 P61328 FGF12 P61328.T229.p_FGF12 P61328_T229t _1_1_229_229 P61328 P61328|P61328-2|C9JEN8 Fibroblast growth factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6954.6954.2 13.51 9.67 1.593 4 1 1 0 787.8856 1494.7986 T229t TMT10 226 (K) SSGtPTMNGGK (V) S(0.0)S(0.0)GT(0.99)PT(0.0)MNGGK K:TMT10,t:Phosphorylated T FGF12 27627 2 1 6162.1 13.51 HUMAN 1 21.0933 44.5083 RSRLTPVSPESSSTE-p Q13501;S272-p RSRLTPVSPESSSTE 0.295510663674384 0.00212228854410704 -0.184666666666667 -0.745666666666667 9.96826814422992 41.545487989923 -0.184666666666667 -0.745666666666667 0.100733328762507 7.00569459773447e-05 -1.97619806115073 -10.8488224691486 Q13501 SQSTM1 Q13501.S272.p_SQSTM1 Q13501_S272s _1_1_272_272 Q13501 Q13501|E7EMC7|Q13501-2 Sequestosome-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10001.10001.2 14.03 14.03 2.394 6 1 1 0 900.431 1719.885 S272s Hydrogen 268 (R) LTPVsPESSSTEEK (S) LT(0.0)PVS(0.99)PES(0.0)S(0.0)S(0.0)T(0.0)EEK K:TMT10-Lys-Only,s:Phosphorylated S SQSTM1 48485.1 7 9 541.1 276.49 HUMAN 1 -9.9683 -41.5455 RSRMSDYSPNSTGSV-p Q93075;S420-p RSRMSDYSPNSTGSV 0.781374547736925 0.746401233120036 -0.0466666666666667 -0.07 2.05849432890735 1.75385492726909 -0.0466666666666667 -0.07 0.622516070087123 0.667750938798177 -0.521717410429936 -0.4535237310004 Q93075 TATDN2 Q93075.S420.p_TATDN2 Q93075_S420s _1_1_420_420 Q93075 Q93075 Putative deoxyribonuclease TATDN2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9286.9286.2 12.84 12.84 1.725 8 1 1 0 1070.4625 2059.9552 S420s TMT10 416 (R) MSDYsPNSTGSVQNTSR (D) MS(0.0)DY(0.0)S(0.99)PNS(0.0)T(0.0)GS(0.0)VQNT(0.0)S(0.0)R s:Phosphorylated S TATDN2 86048.5 1 5 1656.1 123.28 HUMAN 1 -2.0585 -1.7539 RSRPRANSGGVDLDS-p Q92766;S1167-p RSRPRANSGGVDLDS 0.104981509317 0.184388752201514 -0.619333333333333 -0.132 20.630119127427 9.65351158954641 -0.619333333333333 -0.132 0.0086494419294133 0.108305083381421 -4.01550474757884 -1.92082470441467 Q92766 RREB1 Q92766.S1167.p_RREB1 Q92766_S1167s _1_1_1167_1167 Q92766 Q92766-2|Q92766-3|Q92766-5|A0A087X055 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22022.22022.3 22.07 22.07 5.197 4 1 1 0 807.7252 2341.1924 S1167s TMT10 1165 (R) ANsGGVDLDSSGEFASIEK (M) ANS(0.99)GGVDLDS(0.0)S(0.0)GEFAS(0.0)IEK K:TMT10,s:Phosphorylated S RREB1 184269.8 2 20 179.1 480.48 HUMAN 1 -20.6301 -9.6535 RSRQNPQSPPQDSSV-p Q9UBN7;S22-p RSRQNPQSPPQDSSV 0.61012981654243 0.818320929484172 0.0776666666666667 0.0236666666666667 3.97673691114942 1.21811337567769 0.0776666666666667 0.0236666666666667 0.400245362757632 0.755420319522989 0.912680240501162 0.327695886704642 Q9UBN7 HDAC6 Q9UBN7.S22.p_HDAC6 Q9UBN7_S22s _1_1_22_22 Q9UBN7 Q9UBN7 Histone deacetylase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8501.8501.2 18.71 15.57 7.405 5 1 1 0 1069.5287 2058.0868 S22s TMT10 18 (R) QNPQsPPQDSSVTSK (R) QNPQS(0.99)PPQDS(0.0)S(0.0)VT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S HDAC6 133014.4 6 1 4845.1 25.96 HUMAN 1 3.9767 1.2181 RSRRKTGTLQPWNSD-p Q9H0H5;T251-p RSRRKTGTLQPWNSD 0.3728639655768 0.00868295677400181 0.129333333333333 0.432333333333333 7.94802973311395 29.2329211571567 0.129333333333333 0.432333333333333 0.160397290118715 0.00119318527267356 1.62614383471761 6.19260413159145 Q9H0H5 RACGAP1 Q9H0H5.T251.p_RACGAP1 Q9H0H5_T251t _1_1_251_251 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17118.17118.2 7.38 7.38 1.559 6 1 1 0 1043.4963 2006.014 T251t TMT10 249 (K) TGtLQPWNSDSTLNSR (Q) T(0.0)GT(0.99)LQPWNS(0.0)DS(0.0)T(0.0)LNS(0.0)R t:Phosphorylated T RACGAP1 71709.9 1 8 574.1 268.64 HUMAN 1 7.948 29.2329 RSRRYSGSDSDSISE-p O14646;S1098-p RSRRYSGSDSDSISE 0.361131241199818 0.357245080537483 -0.166666666666667 0.088 8.22107555557948 5.92973852166289 -0.166666666666667 0.088 0.150623399237058 0.255285499933793 -1.67349108061085 1.27173773773991 O14646 CHD1 O14646.S1098.p_CHD1 O14646_S1096sS1098s_2_2_1096_1098 O14646 O14646|O14646-2 Chromodomain-helicase-DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5688.5688.4 8.97 8.97 1.471 6 2 2 0 622.5475 2327.2356 S1096s S1098s Hydrogen 1094 (R) RYsGsDSDSISEGKRPK (K) RY(0.0)S(0.99)GS(0.99)DS(0.0)DS(0.0)IS(0.0)EGKRPK K:TMT10-Lys-Only,s:Phosphorylated S CHD1 197825.1 6 15 848.1 212.75 HUMAN 1 -8.2211 5.9297 RSRSAMDSPVPASMF-p O00178;S12-p RSRSAMDSPVPASMF 0.465135171359363 0.294497649687101 0.140666666666667 0.120666666666667 6.13492519038819 7.0096088345758 0.140666666666667 0.120666666666667 0.24350477446267 0.199085264535239 1.3085639545898 1.46229053067183 O00178 GTPBP1 O00178.S12.p_GTPBP1 O00178_S12s _1_1_12_12 O00178 O00178|F8WAZ4 GTP-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22301.22301.3 11.32 11.32 1.282 5 1 1 0 857.0582 2489.2002 S12s TMT10 8 (R) SAMDsPVPASMFAPEPSSPGAAR (A) S(0.0)AMDS(0.99)PVPAS(0.0)MFAPEPS(0.0)S(0.0)PGAAR s:Phosphorylated S GTPBP1 73080.2 1 1 2114.1 97.01 HUMAN 1 6.1349 7.0096 RSRSKSYSPGRRRRS-p J3QK89;S817-p RSRSKSYSPGRRRRS 0.697222520756474 0.00320981770772267 0.102333333333333 0.685 2.94157165935037 37.385383286559 0.102333333333333 0.685 0.507975579058135 0.000182583560285811 0.708519652945556 9.01529086686789 J3QK89 NotFound J3QK89.S817.p_NotFound J3QK89_S817s _1_1_817_817 J3QK89 J3QK89|Q8IWX8 Calcium homeostasis endoplasmic reticulum protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3627.3627.3 8.65 8.65 3.321 3 1 1 0 377.8551 1051.5846 S817s TMT10 815 (K) SYsPGRR (R) S(0.0)Y(0.0)S(0.99)PGRR s:Phosphorylated S CHERP 105388.1 3 3 2291.1 89.54 HUMAN 1 2.9416 37.3854 RSRSLSESYELSSDL-p A0A087WWK8;S95-p RSRSLSESYELSSDL 0.0428370985731628 0.159929472702876 -0.551 -0.182333333333333 30.5006060105384 10.4702065754348 -0.551 -0.182333333333333 0.000891126582471393 0.0897386108640756 -6.58589183961965 -2.06265441369404 A0A087WWK8 IQSEC1 A0A087WWK8.S95.p_IQSEC1 A0A087WWK8_S95s _1_1_95_95 A0A087WWK8 A0A087WWK8|Q6DN90 IQ motif and SEC7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20441.20441.3 13.51 13.51 2.348 6 1 1 0 747.0315 2159.112 S95s TMT10 91 (R) SLSEsYELSSDLQDK (Q) S(0.0)LS(0.0)ES(0.99)Y(0.0)ELS(0.0)S(0.0)DLQDK K:TMT10,s:Phosphorylated S IQSEC1 125330.2 3 2 768.1 228.42 HUMAN 1 -30.5006 -10.4702 RSRSLSNSNPDISGT-p Q96N67-6;S900-p RSRSLSNSNPDISGT 0.273928033215129 0.567519876778809 0.203333333333333 0.104666666666667 10.6491896734266 3.31737608701349 0.203333333333333 0.104666666666667 0.0861154415338007 0.465867475527987 2.09475788516829 0.784052721810772 Q96N67 DOCK7 Q96N67.6.S900.p_DOCK7 Q96N67-6_S900s _1_1_900_900 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3|Q96N67-4 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13812.13812.2 20.86 20.86 3.396 7 1 1 0 1249.0664 2417.163 S900s TMT10 896 (R) SLSNsNPDISGTPTSPDDEVR (S) S(0.0)LS(0.0)NS(0.99)NPDIS(0.0)GT(0.0)PT(0.0)S(0.0)PDDEVR s:Phosphorylated S DOCK7 243551.1 5 14 345.1 352.4 HUMAN 1 10.6492 3.3174 RSRSQSRSNSPLPVP-p Q13247;S301-p RSRSQSRSNSPLPVP 0.850252688548194 0.635580470232454 -0.0286666666666667 -0.0513333333333333 1.36363909917052 2.67913697588278 -0.0286666666666667 -0.0513333333333333 0.730526694122134 0.539617843989025 -0.362760528281708 -0.654365968850986 Q13247 SRSF6 Q13247.S301.p_SRSF6 Q13247_S301sS303s_2_2_301_303 Q13247 Q13247|Q13247-3 Serine/arginine-rich splicing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18024.18024.3 9.33 6.29 9.329 3 2 2 0 580.9626 1580.9412 S301s S303s TMT10 301 (R) sNsPLPVPPSK (A) S(0.99)NS(0.99)PLPVPPS(0.0)K K:TMT10,s:Phosphorylated S SRSF6 39700.2 6 30 743.1 233.79 HUMAN 1 -1.3636 -2.6791 RSRSRGRSKDRDPNR-p Q9P2N5;S187-p RSRSRGRSKDRDPNR 0.0974577541997144 0.00185583081132343 1.59333333333333 -1.39366666666667 21.4229878991397 42.9133932718036 1.59333333333333 -1.39366666666667 0.00720611535645313 5.11282199465692e-05 4.19121384774313 -11.5226939632614 Q9P2N5 RBM27 Q9P2N5.S187.p_RBM27 Q9P2N5_S187s _1_1_187_187 Q9P2N5 Q9P2N5|U3KPZ7 RNA-binding protein 27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.2742.2742.3 8.59 4.69 99 1 1 1 0 580.3082 1658.9451 S187s TMT10 185 (R) GRsKDRDPNR (N) GRS(1.0)KDRDPNR K:TMT10,s:Phosphorylated S RBM27 119172.2 3 2 1221.1 164.77 HUMAN 1 21.423 -42.9134 RSRSRHSSISPSTLT-p Q14004-2;S437-p RSRSRHSSISPSTLT 0.542135646907035 0.0142580161297992 0.123 0.422333333333333 4.90617638710359 25.5959739026585 0.123 0.422333333333334 0.323133780222053 0.00275678317612249 1.0868360577323 5.18964010905136 Q14004 CDK13 Q14004.2.S437.p_CDK13 Q14004-2_S437sS439s_2_2_437_439 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17162.17162.2 11.45 11.45 2 6 2 2 0 830.403 1499.8631 S437s S439s Hydrogen 435 (R) HSsIsPSTLTLK (S) HS(0.0)S(0.99)IS(0.99)PS(0.0)T(0.0)LT(0.0)LK K:TMT10-Lys-Only,s:Phosphorylated S CDK13 159173.6 6 21 145.1 520.12 HUMAN 1 4.9062 25.596 RSRSRRSSIGLRVAF-p Q96GN5;S139-p RSRSRRSSIGLRVAF 0.0521675815690823 0.00903530492813261 -0.646333333333333 -0.866 27.8544225991381 28.9254823985057 -0.646333333333333 -0.866 0.00163891994360258 0.00128071282971491 -5.80497310207875 -6.10252536349583 Q96GN5 CDCA7L Q96GN5.S139.p_CDCA7L Q96GN5_S139s _1_1_139_139 Q96GN5 Q96GN5|Q96GN5-2|Q96GN5-4|Q96GN5-5 Cell division cycle-associated 7-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4304.4304.2 9.76 2.51 1.56 2 1 1 0 434.7239 788.4737 S139s Hydrogen 137 (R) RSsIGLR (V) RS(0.0)S(0.99)IGLR s:Phosphorylated S CDCA7L 53118.2 3 3 3714.1 44.69 HUMAN 1 -27.8544 -28.9255 RSRSRRYSGSDSDSI-p O14646;S1096-p RSRSRRYSGSDSDSI 0.301224036518654 0.157195410713329 0.173333333333333 -0.177 9.78390079984779 10.5680228990572 0.173333333333333 -0.177 0.105101743391507 0.0877400161674299 1.9441899308013 -2.07969638992297 O14646 CHD1 O14646.S1096.p_CHD1 O14646_S1096s _1_1_1096_1096 O14646 O14646|O14646-2 Chromodomain-helicase-DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6613.6613.4 14.75 14.75 1.81 6 1 1 0 659.8458 2556.3985 S1096s TMT10 1094 (R) RYsGSDSDSISEGKRPK (K) RY(0.0)S(0.99)GS(0.0)DS(0.0)DS(0.0)IS(0.0)EGKRPK K:TMT10,s:Phosphorylated S CHD1 197825.1 2 5 848.1 212.75 HUMAN 1 9.7839 -10.568 RSRSRSRSPGRPPKS-p Q14739;S86-p RSRSRSRSPGRPPKS 0.733523257001101 0.845772025039165 0.061 0.026 2.54779984935405 1.02229222049563 0.061 0.026 0.556185951609274 0.790261415343829 0.626967473049201 0.279433280242699 Q14739 LBR Q14739.S86.p_LBR Q14739_S86s _1_1_86_86 Q14739 Q14739 Lamin-B receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3513.3513.2 8.43 8.43 99 1 1 1 0 524.2819 967.5886 S86s Hydrogen 86 (R) sPGRPPK (S) S(1.0)PGRPPK K:TMT10-Lys-Only,s:Phosphorylated S LBR 71101.3 1 3 1716.1 119.76 HUMAN 1 2.5478 1.0223 RSRSRSYSPAHNRER-p Q9Y2W1;S55-p RSRSRSYSPAHNRER 0.320124779698436 0.00683011918389872 0.144666666666667 0.612 9.25836698918413 31.0697472150596 0.144666666666667 0.612 0.118621469840819 0.000781673301249386 1.85309708401258 6.75310586837727 Q9Y2W1 THRAP3 Q9Y2W1.S55.p_THRAP3 Q9Y2W1_S55s _1_1_55_55 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3682.3682.3 14.98 14.98 2.233 3 1 1 0 414.1939 1160.601 S55s TMT10 53 (R) SYsPAHNR (E) S(0.0)Y(0.0)S(0.99)PAHNR s:Phosphorylated S THRAP3 108720.9 5 53 10.2 1293.04 HUMAN 1 9.2584 31.0697 RSRSWEDSPERGRPH-p A0A1B0GTW1;S233-p RSRSWEDSPERGRPH 0.490630337084989 0.342330388859627 -0.0923333333333333 0.172666666666667 5.69915266471282 6.16659588494561 -0.0923333333333334 0.172666666666667 0.269205999017917 0.241735487875907 -1.23077906836529 1.31386672403482 A0A1B0GTW1 NotFound A0A1B0GTW1.S233.p_NotFound A0A1B0GTW1_S233s _1_1_233_233 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4384.4384.4 14.3 9.17 5.111 2 1 1 0 512.4892 1966.9681 S233s TMT10 229 (R) SWEDsPERGRPHER (A) S(0.0)WEDS(0.99)PERGRPHER s:Phosphorylated S TJP2 141123.7 4 4 41.1 827.72 HUMAN 1 -5.6992 6.1666 RSRTRTDSYSAGQSV-p P42345;S2448-p RSRTRTDSYSAGQSV 0.0651075040180817 0.0309874230077924 -0.431 -0.285333333333333 25.6550038011688 20.3914908870139 -0.431 -0.285333333333333 0.00271956610579365 0.00913799489921416 -5.21160499656749 -3.95967865257403 P42345 MTOR P42345.S2448.p_MTOR P42345_S2448s _1_1_2448_2448 P42345 P42345|B1AKP8 Serine/threonine-protein kinase mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20678.20678.3 26.51 26.51 1.116 5 1 1 0 1056.8676 3088.6203 S2448s Hydrogen 2446 (R) TDsYSAGQSVEILDGVELGEPAHKK (T) T(0.0)DS(0.99)Y(0.0)S(0.0)AGQS(0.0)VEILDGVELGEPAHKK K:TMT10-Lys-Only,s:Phosphorylated S MTOR 290940.5 20 4 571.1 269.24 HUMAN 1 -25.655 -20.3915 RSRTSVQTEDDQLIA-p P35221;T658-p RSRTSVQTEDDQLIA 0.766023104823569 0.880448169638418 0.0443333333333333 0.017 2.22196456258836 0.776971908058468 0.0443333333333333 0.017 0.599519817769365 0.836185840530058 0.557415283550108 0.216938090803435 P35221 CTNNA1 P35221.T658.p_CTNNA1 P35221_T658t _1_1_658_658 P35221 P26232|P26232-5|P35221-2|P26232-2|P26232-3|G3XAM7|P26232-6|A0A0A0MRI5|P26232-4|P35221-3|A0A0A0MTJ6 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13656.13656.2 18.9 18.9 4.382 4 1 1 0 1064.512 2048.0457 T658t TMT10 654 (R) TSVQtEDDQLIAGQSAR (A) T(0.0)S(0.0)VQT(0.99)EDDQLIAGQS(0.0)AR t:Phosphorylated T CTNNA1 100754.2 4 16 169.1 491.55 HUMAN 1 2.222 0.777 RSRVVGGSLRGAQAA-p P18031;S378-p RSRVVGGSLRGAQAA 0.370901171336834 0.129054586273671 -0.144 -0.307666666666667 7.98652323283813 11.7208050981995 -0.144 -0.307666666666667 0.158981897717241 0.0672851910956157 -1.63282265439738 -2.28180138533367 P18031 PTPN1 P18031.S378.p_PTPN1 P18031_S378s _1_1_378_378 P18031 P18031|B4DSN5 Tyrosine-protein phosphatase non-receptor type 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10180.10180.2 8.08 4.17 99 1 1 1 0 498.7759 916.5777 S378s TMT10 374 (R) VVGGsLR (G) VVGGS(1.0)LR s:Phosphorylated S PTPN1 50536.5 4 5 1124.1 174.81 HUMAN 1 -7.9865 -11.7208 RSSAEDRSPENTGSS-p Q7Z3E2;S740-p RSSAEDRSPENTGSS 0.180112631184488 0.14400537470726 0.426333333333333 -0.157333333333333 14.6857269875536 11.0858071202407 0.426333333333333 -0.157333333333333 0.0339959593480707 0.0778788066220333 2.81971419256311 -2.17016166091673 Q7Z3E2 CCDC186 Q7Z3E2.S740.p_CCDC186 Q7Z3E2_S740s_1_1_740_740 Q7Z3E2 Q7Z3E2 Coiled-coil domain-containing protein 186 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16508.16508.3 15.84 11.96 1.709 6 1 1 0 1059.1719 3094.5329 S740s N752n TMT10 734 (R) SSAEDRsPENTGSSVAVDnFPQVDK (A) S(0.0)S(0.0)AEDRS(0.99)PEN(0.0)T(0.0)GS(0.0)S(0.0)VAVDN(0.99)FPQVDK K:TMT10,s:Phosphorylated S,n:Deamidated CCDC186 104369.4 2 2 4728.1 27.39 HUMAN 1 14.6857 -11.0858 RSSAQADSGSSDDEA-p Q12894-2;S195-p RSSAQADSGSSDDEA 0.0416981743708974 0.187316791772281 -1.367 -0.819333333333333 30.7943163683568 9.56758488490866 -1.367 -0.819333333333333 0.000832853016728976 0.110469276965541 -6.6774839591025 -1.90593939434555 Q12894 IFRD2 Q12894.2.S195.p_IFRD2 Q12894-2_S195sS197sS198s_3_3_195_198 Q12894-2 Q12894-2|A0A0R4J2F6|F8WEI6 Isoform 2 of Interferon-related developmental regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4670.4670.3 13.95 13.95 6.87 6 3 3 0 770.6084 2069.9057 S195s S197s S198s TMT10 189 (R) SSAQADsGssDDEAASEAR (S) S(0.0)S(0.0)AQADS(0.99)GS(0.99)S(0.99)DDEAAS(0.0)EAR s:Phosphorylated S IFRD2 66338.4 2 2 6104.1 13.95 HUMAN 1 -30.7943 -9.5676 RSSDKFCSPISSELA-p Q8IVH2;S448-p RSSDKFCSPISSELA 0.423351056629167 0.0144832167858916 -0.120333333333333 -0.370333333333333 6.87837905303554 25.4874384424379 -0.120333333333333 -0.370333333333333 0.205192789098557 0.00282654663829289 -1.43970686367743 -5.16169200088657 Q8IVH2 FOXP4 Q8IVH2.S448.p_FOXP4 Q8IVH2_S448s _1_1_448_448 Q8IVH2 Q8IVH2|Q8IVH2-2|B7ZBM3|Q8IVH2-3 Forkhead box protein P4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23363.23363.3 15.06 15.06 1.196 4 1 1 0 865.7498 2515.2692 S448s TMT10 446 (K) FCsPISSELAQNHEFYK (N) FCS(0.99)PIS(0.0)S(0.0)ELAQNHEFY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FOXP4 73886.5 2 7 2736.1 72.25 HUMAN 1 -6.8784 -25.4874 RSSDSDLSPPRRRQR-p Q9BRD0;S391-p RSSDSDLSPPRRRQR 0.050054490215346 0.0116884830732904 0.455666666666667 0.518 28.7111435470891 27.0222345045251 0.455666666666667 0.518 0.00134550602026937 0.00198507330718944 6.04937094649141 5.567170737143 Q9BRD0 BUD13 Q9BRD0.S391.p_BUD13 Q9BRD0_S391s _1_1_391_391 Q9BRD0 Q9BRD0|Q9BRD0-2 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5443.5443.3 10.14 8.05 1.682 4 1 1 0 509.2452 1445.7546 S391s TMT10 385 (R) SSDSDLsPPRR (R) S(0.0)S(0.0)DS(0.0)DLS(0.99)PPRR s:Phosphorylated S BUD13 70576.6 1 20 171.1 490.08 HUMAN 1 28.7111 27.0222 RSSERGRSPKRLTDL-p P18583-5;S2046-p RSSERGRSPKRLTDL 0.271732742608548 0.0390853824373534 0.969666666666667 -1.37266666666667 10.7230409434314 18.9058961538035 0.969666666666667 -1.37266666666667 0.084663439052037 0.0128650175981006 2.10765617230691 -3.6448034859831 P18583 SON P18583.5.S2046.p_SON P18583-5_S2046s _1_1_2046_2046 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7911.7911.4 10.69 10.69 2.49 2 1 1 0 481.7748 1844.1118 S2046s Hydrogen 2044 (R) GRsPKRLTDLDK (A) GRS(0.99)PKRLT(0.0)DLDK K:TMT10-Lys-Only,s:Phosphorylated S SON 267429.6 1 35 45.1 778.56 HUMAN 1 10.723 -18.9059 RSSGGGYSGDRSGGG-p Q92804;S438-p RSSGGGYSGDRSGGG 0.104115468669624 0.0016237919479163 -0.403333333333333 -0.883333333333333 20.7435505124898 44.4876960957482 -0.403333333333333 -0.883333333333333 0.00842645583232434 3.55820028743056e-05 -4.04037273120032 -12.3464867082795 Q92804 TAF15 Q92804.S438.p_TAF15 Q92804_S438s _1_1_438_438 Q92804 Q92804|Q92804-2 TATA-binding protein-associated factor 2N HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4627.4627.3 15.35 9.68 2.383 6 1 1 0 686.6227 1977.8848 S438s TMT10 432 (R) SSGGGYsGDRSGGGYGGDR (S) S(0.0)S(0.0)GGGY(0.0)S(0.99)GDRS(0.0)GGGY(0.0)GGDR s:Phosphorylated S TAF15 62057.1 1 7 1461.1 140.26 HUMAN 1 -20.7436 -44.4877 RSSGLRNSATGYRQS-p Q9UIQ6;S91-p RSSGLRNSATGYRQS 0.929690895540327 0.0477102565539202 -0.0306666666666667 -0.328 0.62804767873559 17.675547473706 -0.0306666666666667 -0.328 0.865356842640712 0.0170783241631617 -0.177786202004711 -3.39418164677944 Q9UIQ6 LNPEP Q9UIQ6.S91.p_LNPEP Q9UIQ6_S91s _1_1_91_91 Q9UIQ6 Q9UIQ6|Q9UIQ6-2|Q9UIQ6-3 Leucyl-cystinyl aminopeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4578.4578.3 13.53 13.53 2.248 5 1 1 0 526.5926 1497.7971 S91s TMT10 85 (R) SSGLRNsATGYR (Q) S(0.0)S(0.0)GLRNS(0.99)AT(0.0)GY(0.0)R s:Phosphorylated S LNPEP 117860.4 1 4 3800.1 42.87 HUMAN 1 -0.628 -17.6755 RSSGRCHSADDILDV-p Q13796;S897-p RSSGRCHSADDILDV 0.304547302421123 0.682343949117826 0.171666666666667 0.0523333333333334 9.67614057674802 2.27189094667501 0.171666666666667 0.0523333333333334 0.107742225581907 0.592667217197476 1.92549579685128 0.568137075367957 Q13796 SHROOM2 Q13796.S897.p_SHROOM2 Q13796_S897s _1_1_897_897 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13054.13054.5 27.96 21.12 10.096 2 1 1 0 618.894 3010.4751 S897s TMT10 895 (R) CHsADDILDVSLDPQERPQHVHGR (S) CHS(0.99)ADDILDVS(0.0)LDPQERPQHVHGR C:Carbamidomethylation,s:Phosphorylated S SHROOM2 177605.1 2 15 90.1 622.62 HUMAN 1 9.6761 2.2719 RSSGVQPSPARSSSY-p Q5VWQ8;S722-p RSSGVQPSPARSSSY 0.880959558381171 0.00526496528212972 -0.023 -0.518 1.08144185248071 33.1084061539557 -0.023 -0.518 0.77957125083308 0.000488831726015706 -0.294184319717086 -7.42311967319743 Q5VWQ8 DAB2IP Q5VWQ8.S722.p_DAB2IP Q5VWQ8_S722s _1_1_722_722 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4637.4637.2 11.9 11.9 6.22 3 1 1 0 647.8221 1214.6691 S722s TMT10 716 (R) SSGVQPsPAR (S) S(0.0)S(0.0)GVQPS(0.99)PAR s:Phosphorylated S DAB2IP 132592.9 1 9 281.1 388.28 HUMAN 1 -1.0814 -33.1084 RSSHYGGSLPNVNQI-p Q53ET0;S70-p RSSHYGGSLPNVNQI 0.481005429235313 0.116522799853761 0.116333333333333 0.236 5.84965268695319 12.3157530921588 0.116333333333333 0.236 0.260036751088017 0.0586711621553396 1.25773378401013 2.38724066265614 Q53ET0 CRTC2 Q53ET0.S70.p_CRTC2 Q53ET0_S70s_1_1_70_70 Q53ET0 Q53ET0 CREB-regulated transcription coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26859.26859.5 15.47 15.47 1.183 9 1 1 0 750.5674 3667.8302 S70s N75n TMT10 64 (R) SSHYGGsLPNVnQIGSGLAEFQSPLHSPLDSSR (S) S(0.0)S(0.0)HY(0.0)GGS(0.99)LPN(0.0)VN(0.99)QIGS(0.0)GLAEFQS(0.0)PLHS(0.0)PLDS(0.0)S(0.0)R s:Phosphorylated S,n:Deamidated CRTC2 73528.7 2 1 1040.1 185.06 HUMAN 1 5.8497 12.3158 RSSLPPNSPKPVRLT-p A0A0U1RR27;S1300-p RSSLPPNSPKPVRLT 0.495458193368512 0.225384884918916 0.106333333333333 -0.207666666666667 5.61751045498706 8.52241117267058 0.106333333333333 -0.207666666666667 0.274314619948558 0.140526711301144 1.21611341801896 -1.72510226982213 A0A0U1RR27 NotFound A0A0U1RR27.S1300.p_NotFound A0A0U1RR27_S1300s _1_1_1300_1300 A0A0U1RR27 A0A0U1RR27|Q7Z401-2 C-myc promoter-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8787.8996.3 9.27 9.27 1.236 3 1 1 0 606.3417 1737.0423 S1300s TMT10 1294 (R) SSLPPNsPKPVR (L) S(0.0)S(0.0)LPPNS(0.99)PKPVR K:TMT10,s:Phosphorylated S DENND4A 217514.7 1 12 399.1 328.24 HUMAN 1 5.6175 -8.5224 RSSLSSLSPPSSPLD-p Q9ULE0;S462-p RSSLSSLSPPSSPLD 0.891963954203852 0.0914364449085443 0.0223333333333333 0.189 0.971364297328129 13.7386321767729 0.0223333333333333 0.189 0.799583033680659 0.0422801755952739 0.266679957848257 2.64350505921603 Q9ULE0 WWC3 Q9ULE0.S462.p_WWC3 Q9ULE0_S462s _1_1_462_462 Q9ULE0 Q9ULE0|Q9ULE0-2 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30545.30545.2 19.78 19.78 2.675 9 1 1 0 1276.6493 2472.3183 S462s TMT10 456 (R) SSLSSLsPPSSPLDTPFLPASR (D) S(0.0)S(0.0)LS(0.0)S(0.0)LS(0.99)PPS(0.0)S(0.0)PLDT(0.0)PFLPAS(0.0)R s:Phosphorylated S WWC3 123814.7 2 13 161.1 495.35 HUMAN 1 0.9714 13.7386 RSSNRRFSIPESGQG-p Q9Y572;S316-p RSSNRRFSIPESGQG 0.84006019925634 0.0316031790361677 0.0323333333333333 0.388333333333333 1.46211139691572 20.2687457547094 0.0323333333333333 0.388333333333334 0.714149045889108 0.0093999474246136 0.386088894198222 3.9331212716114 Q9Y572 RIPK3 Q9Y572.S316.p_RIPK3 Q9Y572_S316s _1_1_316_316 Q9Y572 Q9Y572 Receptor-interacting serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15380.15380.4 18.66 13.38 5.929 3 1 1 0 609.7885 2356.1665 S316s TMT10 314 (R) RFsIPESGQGGTEMDGFRR (T) RFS(0.99)IPES(0.0)GQGGT(0.0)EMDGFRR s:Phosphorylated S RIPK3 57399.7 5 2 3189.1 58.17 HUMAN 1 1.4621 20.2687 RSSPATHSP______-p A8MUP8;S477-p RSSPATHSP______ 0.168210601929357 0.0456921667392721 0.426666666666667 0.329666666666667 15.4499017889521 17.9338762366608 0.426666666666667 0.329666666666667 0.0285108274095899 0.0160920871654676 2.96326426051123 3.44608731034396 A8MUP8 RARA A8MUP8.S477.p_RARA A8MUP8_S477s _1_1_477_477 A8MUP8 A8MUP8|P10276|P10276-2|P10276-3 Retinoic acid receptor alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4055.4055.2 9.05 9.05 3.153 4 1 1 0 546.7497 1012.5261 S477s TMT10 471 (R) SSPATHsP (-) S(0.0)S(0.0)PAT(0.0)HS(0.99)P s:Phosphorylated S RARA 53989.8 1 3 4310.1 33.86 HUMAN 1 15.4499 17.9339 RSSPEKRSPSAPVCK-p Q6P1L5;S192-p RSSPEKRSPSAPVCK 0.264910169118696 0.458329390726784 0.165 0.079 10.9407106515453 4.51706008492667 0.165 0.0790000000000001 0.0805246665034982 0.353422334711248 2.14572553822674 1.01457438853629 Q6P1L5 FAM117B Q6P1L5.S192.p_FAM117B Q6P1L5_S192s _1_1_192_192 Q6P1L5 Q6P1L5|Q6P1L5-2 Protein FAM117B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6919.6919.4 15.1 15.1 2.794 4 1 1 0 575.0628 2217.2628 S192s TMT10 186 (R) SSPEKRsPSAPVCK (A) S(0.0)S(0.0)PEKRS(0.99)PS(0.0)APVCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S FAM117B 62537.3 2 3 492.1 293.79 HUMAN 1 10.9407 4.5171 RSSPPLRTPDVLESS-p O75676;T687-p RSSPPLRTPDVLESS 0.267884306972317 0.179082848987937 0.258666666666667 -0.174333333333333 10.8413944025461 9.82329885999642 0.258666666666667 -0.174333333333333 0.0823873548948234 0.10415259955081 2.12834553989147 -1.95025414784743 O75676 RPS6KA4 O75676.T687.p_RPS6KA4 O75676_T687t _1_1_687_687 O75676 O75676 Ribosomal protein S6 kinase alpha-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16066.16066.3 9.99 9.99 1.358 5 1 1 0 758.7253 2194.2029 T687t TMT10 681 (R) SSPPLRtPDVLESSGPAVR (S) S(0.0)S(0.0)PPLRT(0.99)PDVLES(0.0)S(0.0)GPAVR t:Phosphorylated T RPS6KA4 86174.8 1 5 1564.1 131.32 HUMAN 1 10.8414 -9.8233 RSSSESHSPLYMHPP-p P41182;S466-p RSSSESHSPLYMHPP 0.101215219100673 0.0268091516661689 0.320333333333333 0.364333333333333 21.0556441911472 21.3363311824002 0.320333333333333 0.364333333333333 0.00784215787139868 0.00735134630356597 4.10925528532846 4.16755607672637 P41182 BCL6 P41182.S466.p_BCL6 P41182_S466s _1_1_466_466 P41182 P41182|P41182-2 B-cell lymphoma 6 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9682.9682.4 16.85 13.38 1.279 6 1 1 0 556.2729 2142.1054 S466s TMT10 460 (R) SSSESHsPLYMHPPK (C) S(0.0)S(0.0)S(0.0)ES(0.0)HS(0.99)PLY(0.0)MHPPK K:TMT10,s:Phosphorylated S BCL6 80670.9 2 13 557.1 273.04 HUMAN 1 21.0556 21.3363 RSSSLGNSPERGPLR-p Q5SQI0;S276-p RSSSLGNSPERGPLR 0.53813657509314 0.431082438265567 -0.0846666666666667 -0.0746666666666666 4.97578477508178 4.86892150600351 -0.0846666666666667 -0.0746666666666666 0.317995901418845 0.325917626866309 -1.09961865118996 -1.07976823803572 Q5SQI0 ATAT1 Q5SQI0.S276.p_ATAT1 Q5SQI0_S276s _1_1_276_276 Q5SQI0 Q5SQI0|Q5SQI0-2 Alpha-tubulin N-acetyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21566.21566.4 16.66 16.66 2.882 4 1 1 0 744.3883 2894.5686 S276s TMT10 270 (R) SSSLGNsPERGPLRPFVPEQELLR (S) S(0.0)S(0.0)S(0.0)LGNS(0.99)PERGPLRPFVPEQELLR s:Phosphorylated S ATAT1 47037.5 2 3 3389.1 52.22 HUMAN 1 -4.9758 -4.8689 RSSSRPCSPVHHHEG-p Q9Y2K6;S394-p RSSSRPCSPVHHHEG 0.732378734096004 0.278390901829383 -0.139333333333333 -0.152333333333333 2.56460311129116 7.31635078111126 -0.139333333333333 -0.152333333333333 0.554038173513039 0.185508973327732 -0.630500637080586 -1.51584504177951 Q9Y2K6 USP20 Q9Y2K6.S394.p_USP20 Q9Y2K6_S394s _1_1_394_394 Q9Y2K6 Q9Y2K6 Ubiquitin carboxyl-terminal hydrolase 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.2756.2756.5 12.87 12.87 1.137 4 1 1 0 490.4402 2368.2093 S394s TMT10 388 (R) SSSRPCsPVHHHEGHAK (L) S(0.0)S(0.0)S(0.0)RPCS(0.99)PVHHHEGHAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S USP20 103827 1 7 1704.1 120.18 HUMAN 1 -2.5646 -7.3164 RSSTHIRSLEPPAGL-p Q9BSJ5;S517-p RSSTHIRSLEPPAGL 0.89898957204769 0.412468308221042 -0.0286666666666667 0.196666666666667 0.90355433874064 5.11571092350183 -0.0286666666666667 0.196666666666667 0.812165554208031 0.307913625738443 -0.2495079524119 1.12498920145697 Q9BSJ5 C17orf80 Q9BSJ5.S517.p_C17orf80 Q9BSJ5_S517s _1_1_517_517 Q9BSJ5 Q9BSJ5|Q9BSJ5-3 Uncharacterized protein C17orf80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9106.9106.5 8.82 2.63 4.499 7 1 1 0 820.2271 4017.1728 S517s Hydrogen 517 (R) sLEPPAGLTTSNFSLMRLLGAVQKGWIRCNTTIR (K) S(0.99)LEPPAGLT(0.0)T(0.0)S(0.0)NFS(0.0)LMRLLGAVQKGWIRCNT(0.0)T(0.0)IR K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S C17orf80 68398 1 3 3866.1 41.56 HUMAN 1 -0.9036 5.1157 RSSTPLHSPSPIRVH-p O95817;S289-p RSSTPLHSPSPIRVH 0.701517981620146 0.93200471188142 0.0526666666666667 0.00966666666666669 2.89593830496342 0.431237111522592 0.0526666666666667 0.00966666666666669 0.51334125675539 0.90547463476931 0.69919576411532 0.124407761962641 O95817 BAG3 O95817.S289.p_BAG3 O95817_S289s _1_1_289_289 O95817 O95817 BAG family molecular chaperone regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8193.8193.3 16.57 16.57 3.626 5 1 1 0 529.9423 1507.843 S289s TMT10 283 (R) SSTPLHsPSPIR (V) S(0.0)S(0.0)T(0.0)PLHS(0.99)PS(0.0)PIR s:Phosphorylated S BAG3 61764.7 9 11 416.1 321.05 HUMAN 1 2.8959 0.4312 RSSTPRESPCGKIAV-p P49792;S2462-p RSSTPRESPCGKIAV 0.0651075040180817 0.00616818883059662 -0.445 -0.814333333333333 25.6409744064214 31.8489025016972 -0.445 -0.814333333333334 0.00272836556338092 0.000653295625030937 -5.20796926746473 -7.00297458589368 P49792 RANBP2 P49792.S2462.p_RANBP2 P49792_S2462s _1_1_2462_2462 P49792 P49792|Q99666|O14715|J3KNE0|A6NKT7|Q7Z3J3|A0A286YES2|F8VYC4|P0DJD1|A0A1W2PNU4|P0DJD0|J3KQ37|H7BZ48 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4351.4351.3 12.39 7.34 4.682 4 1 1 0 581.9549 1663.8838 S2462s TMT10 2456 (R) SSTPREsPCGK (I) S(0.0)S(0.0)T(0.0)PRES(0.99)PCGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RANBP2 362585.9 2 53 9.1 1298.62 HUMAN 1 -25.641 -31.8489 RSSTRPPSIADPDPS-p Q9NX94-2;S194-p RSSTRPPSIADPDPS 0.274514677336249 0.00778808550426966 0.295333333333333 0.499 10.6215426165155 30.0886683930711 0.295333333333333 0.499 0.086665398508244 0.000979790356627708 2.08993149242578 6.448884856175 Q9NX94 WBP1L Q9NX94.2.S194.p_WBP1L Q9NX94-2_S194s _1_1_194_194 Q9NX94-2 Q9NX94-2 Isoform 2 of WW domain binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16135.16135.3 11.99 11.99 1.396 5 1 1 0 811.0601 2351.204 S194s TMT10 188 (R) SSTRPPsIADPDPSDLPVDR (A) S(0.0)S(0.0)T(0.0)RPPS(0.99)IADPDPS(0.0)DLPVDR s:Phosphorylated S WBP1L 41065.9 1 1 2953.1 64.8 HUMAN 1 10.6215 30.0887 RSSTSGDTEEEEEEE-p O15231-3;T158-p RSSTSGDTEEEEEEE 0.384449353793913 0.0938066784636305 0.165 0.181333333333333 7.68641953036829 13.5924514158421 0.165 0.181333333333333 0.170356240369149 0.0437275211399195 1.58071082006817 2.61687688744732 O15231 ZNF185 O15231.3.T158.p_ZNF185 O15231-3_T158t _1_1_158_158 O15231-3 O15231-6|O15231-8|O15231-3|O15231-7|O15231-4|H7BZT5|O15231-5|O15231-2 Isoform 3 of Zinc finger protein 185 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16631.16631.3 24.32 20.31 2.208 7 1 1 0 1123.5055 3288.528 T158t TMT10 151 (R) RSSTSGDtEEEEEEEVVPFSSDEQK (R) RS(0.0)S(0.0)T(0.0)S(0.0)GDT(0.99)EEEEEEEVVPFS(0.0)S(0.0)DEQK K:TMT10,t:Phosphorylated T ZNF185 74524.1 3 5 166.1 494.62 HUMAN 1 7.6864 13.5925 RSSYHNITDVCELAV-p P16471;T434-p RSSYHNITDVCELAV 0.127652091791245 0.0885820566418882 0.267666666666667 -0.287333333333333 18.5256733390273 13.9322290169381 0.267666666666667 -0.287333333333333 0.0140421195481281 0.0404368296352271 3.56944376270661 -2.67888645610319 P16471 PRLR P16471.T434.p_PRLR P16471_T434t_1_1_434_434 P16471 P16471|P16471-2 Prolactin receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29919.29919.5 11.58 11.58 1.204 5 1 1 0 831.035 4070.1835 N432n T434t TMT10 428 (R) SSYHnItDVCELAVGPAGAPATLLNEAGKDALK (S) S(0.0)S(0.0)Y(0.0)HN(0.99)IT(0.99)DVCELAVGPAGAPAT(0.0)LLN(0.0)EAGKDALK C:Carbamidomethylation,K:TMT10,n:Deamidated,t:Phosphorylated T PRLR 70474.2 1 5 827.1 217.44 HUMAN 1 18.5257 -13.9322 RSTFRGPSPEPPPSP-p Q9HCH0;S567-p RSTFRGPSPEPPPSP 0.775461946756303 0.453305179998159 0.04 0.074 2.11580353872882 4.57925149689982 0.04 0.074 0.614355352160927 0.34839735587024 0.534297530659914 1.02616373507519 Q9HCH0 NCKAP5L Q9HCH0.S567.p_NCKAP5L Q9HCH0_S567s _1_1_567_567 Q9HCH0 Q9HCH0|Q9HCH0-3|Q9HCH0-2 Nck-associated protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.32871.32871.3 23.73 23.73 1.13 7 1 1 0 1378.7194 4054.1851 S567s TMT10 561 (R) STFRGPsPEPPPSPLQVPTYPQLTLEVPQAPEVLR (S) S(0.0)T(0.0)FRGPS(0.99)PEPPPS(0.0)PLQVPT(0.0)Y(0.0)PQLT(0.0)LEVPQAPEVLR s:Phosphorylated S NCKAP5L 140323.1 10 8 609.1 261.98 HUMAN 1 2.1158 4.5793 RSTFSTNYRSLGSVQ-p P05783;Y13-p RSTFSTNYRSLGSVQ 0.64769061845746 0.100371309693376 0.170333333333333 -0.292333333333333 3.5333561638658 13.1930353835754 0.170333333333333 -0.292333333333333 0.443265962124244 0.0479398269090842 0.826808607925072 -2.54448882883423 P05783 KRT18 P05783.Y13.p_KRT18 P05783_Y13y _1_1_13_13 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.9248.9370.2 15.27 7.78 3.863 5 1 1 0 642.7944 1204.616 Y13y TMT10 7 (R) STFSTNyR (S) S(0.0)T(0.0)FS(0.0)T(0.0)NY(0.99)R y:Phosphorylated Y KRT18 48057 2 1 29.1 61.39 HUMAN 1 3.5334 -13.193 RSTGPGASLGTGYDR-p O15551;S209-p RSTGPGASLGTGYDR 0.389352290909405 0.080556827652968 0.129333333333333 -0.232 7.58110521093954 14.5092829953133 0.129333333333333 -0.232 0.174537792525259 0.0354055789605475 1.5623971238119 -2.78516843325916 O15551 CLDN3 O15551.S209.p_CLDN3 O15551_S209s _1_1_209_209 O15551 O15551 Claudin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10472.10472.2 13.17 9.23 2.275 5 1 1 0 824.3826 1567.7914 S209s TMT10 203 (R) STGPGAsLGTGYDR (K) S(0.0)T(0.0)GPGAS(0.99)LGT(0.0)GY(0.0)DR s:Phosphorylated S CLDN3 23831.6 5 3 3325.1 53.91 HUMAN 1 7.5811 -14.5093 RSTREARSPQPNKRH-p A9Z1X7;S684-p RSTREARSPQPNKRH 0.108274227113564 0.35009355225705 0.680666666666667 -0.144333333333333 20.2782282307389 6.04331356238586 0.680666666666667 -0.144333333333333 0.00937944577394472 0.248695910427968 3.93891719856201 -1.29196644912492 A9Z1X7 NotFound A9Z1X7.S684.p_NotFound A9Z1X7_S684s _1_1_684_684 A9Z1X7 A9Z1X7|Q8IYB3 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3045.3045.4 10.76 6.06 99 1 1 1 0 430.9873 1640.9597 S684s TMT10 681 (R) EARsPQPNKR (H) EARS(1.0)PQPNKR K:TMT10,s:Phosphorylated S SRRM1 103445.7 8 36 8.1 1346.57 HUMAN 1 20.2782 -6.0433 RSTSYGYSRSRSGSR-p Q13242;S193-p RSTSYGYSRSRSGSR 0.481330488339782 0.0362655689559175 0.109666666666667 0.362 5.8450459259805 19.3906827268194 0.109666666666667 0.362 0.260312730355357 0.0115061949313083 1.25691019404816 3.74601754918951 Q13242 SRSF9 Q13242.S193.p_SRSF9 Q13242_S193s _1_1_193_193 Q13242 Q13242 Serine/arginine-rich splicing factor 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5746.5746.2 12.07 12.07 4.271 6 1 1 0 615.2747 1149.5738 S193s TMT10 187 (R) STSYGYsR (S) S(0.0)T(0.0)S(0.0)Y(0.0)GY(0.0)S(0.99)R s:Phosphorylated S SRSF9 25655.9 2 2 2246.1 91.74 HUMAN 1 5.845 19.3907 RSTTCMTSLKSTNPS-p P30550;S360-p RSTTCMTSLKSTNPS 0.0635370415880919 0.670308848152671 -0.39 0.08 25.8573448990324 2.37400786507802 -0.39 0.0800000000000001 0.00259576582345194 0.578894220186618 -5.264244815305 0.590049814613314 P30550 GRPR P30550.S360.p_GRPR P30550_S360s _1_1_360_360 P30550 P30550 Gastrin-releasing peptide receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12886.12886.2 10.44 10.44 10.441 5 1 1 0 783.8872 1486.801 S360s TMT10 354 (R) STTCMTsLK (S) S(0.0)T(0.0)T(0.0)CMT(0.0)S(0.99)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GRPR 43996.8 3 1 4735.1 27.29 HUMAN 1 -25.8573 2.374 RSTTTRDSPVLRNIN-p O94964-2;S1482-p RSTTTRDSPVLRNIN 0.82619699417303 0.468772082796792 -0.04 0.075 1.60026906914891 4.38559860354504 -0.04 0.075 0.691788109539874 0.36428403604247 -0.418339067382517 0.989976311455178 O94964 SOGA1 O94964.2.S1482.p_SOGA1 O94964-2_S1482s _1_1_1482_1482 O94964-2 O94964-2|O94964-3 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5435.5435.3 9.97 5.33 2.47 5 1 1 0 514.6019 1461.8223 S1482s TMT10 1476 (R) STTTRDsPVLR (N) S(0.0)T(0.0)T(0.0)T(0.0)RDS(0.99)PVLR s:Phosphorylated S SOGA1 185623.3 2 20 215.1 433.51 HUMAN 1 -1.6003 4.3856 RSTWSQLSAVKRKGL-p Q96DR7;S422-p RSTWSQLSAVKRKGL 0.0469412164037233 0.0639348260471012 -0.511333333333333 -0.266666666666667 29.4993482917211 15.8986108031485 -0.511333333333333 -0.266666666666667 0.00112218683856968 0.0257121811808276 -6.28123362313217 -3.04661077245068 Q96DR7 ARHGEF26 Q96DR7.S422.p_ARHGEF26 Q96DR7_S422s _1_1_422_422 Q96DR7 Q96DR7|Q96DR7-4|Q96DR7-3 Rho guanine nucleotide exchange factor 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20060.20060.3 13.03 11.26 3.844 4 1 1 0 548.9646 1564.9099 S422s TMT10 416 (R) STWSQLsAVK (R) S(0.0)T(0.0)WS(0.0)QLS(0.99)AVK K:TMT10,s:Phosphorylated S ARHGEF26 97914.4 2 13 478.1 300.31 HUMAN 1 -29.4993 -15.8986 RSVASNQSEMEFSSL-p Q8N163;S681-p RSVASNQSEMEFSSL 0.89832071009182 0.00917997185674062 -0.019 0.421333333333333 0.912391333942787 28.7932061383254 -0.019 0.421333333333333 0.81051464534458 0.00132032056002728 -0.251756001830026 6.0640861147447 Q8N163 CCAR2 Q8N163.S681.p_CCAR2 Q8N163_S681s _1_1_681_681 Q8N163 Q8N163|Q8N163-2|G3V119 Cell cycle and apoptosis regulator protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23217.23217.3 21.13 21.13 3.15 5 1 1 0 885.0812 2573.2628 S681s TMT10 675 (R) SVASNQsEMEFSSLQDMPK (E) S(0.0)VAS(0.0)NQS(0.99)EMEFS(0.0)S(0.0)LQDMPK K:TMT10,s:Phosphorylated S CCAR2 103527.3 1 7 891.1 204.52 HUMAN 1 -0.9124 28.7932 RSVENQESVEIINDL-p Q8WYP5-2;S1919-p RSVENQESVEIINDL 0.307627396487881 0.0226216412887326 0.204 -0.380333333333333 9.56754109631338 22.471203820709 0.204 -0.380333333333333 0.110470390799368 0.00566082354942566 1.90666530309276 -4.4257116007368 Q8WYP5 AHCTF1 Q8WYP5.2.S1919.p_AHCTF1 Q8WYP5-2_S1919s _1_1_1919_1919 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23922.23922.3 16.66 16.34 8.826 2 1 1 0 752.3907 2175.1909 S1919s TMT10 1913 (R) SVENQEsVEIINDLK (V) S(0.0)VENQES(0.99)VEIINDLK K:TMT10,s:Phosphorylated S AHCTF1 258049.6 1 29 40.1 829.79 HUMAN 1 9.5675 -22.4712 RSVICDISPLRQIVR-p Q9UGU0;S871-p RSVICDISPLRQIVR 0.90552186362789 0.00493362651224114 0.022 -0.611666666666667 0.846406972745044 33.6514337578066 0.022 -0.611666666666667 0.822923193405858 0.000431376640818121 0.234894707603487 -7.6107079586451 Q9UGU0 TCF20 Q9UGU0.S871.p_TCF20 Q9UGU0_S871s _1_1_871_871 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24833.24833.3 16.68 13.94 4.646 2 1 1 0 655.691 1885.0891 S871s TMT10 865 (R) SVICDIsPLRQIVR (D) S(0.0)VICDIS(0.99)PLRQIVR C:Carbamidomethylation,s:Phosphorylated S TCF20 213250.7 3 13 197.1 457.96 HUMAN 1 0.8464 -33.6514 RSVIVIRSLVADGVA-p Q8NI35;S718-p RSVIVIRSLVADGVA 0.536318608089857 0.910913482532797 -0.0943333333333333 -0.012 5.00592531556453 0.567450935600831 -0.0943333333333334 -0.012 0.31579661348461 0.877515722404977 -1.10514384322263 -0.161541733953069 Q8NI35 INADL Q8NI35.S718.p_INADL Q8NI35_S718s _1_1_718_718 Q8NI35 Q8NI35|Q8NI35-2 InaD-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24795.24795.3 12.48 12.48 4.523 2 1 1 0 665.0425 1913.1381 S718s TMT10 712 (R) SVIVIRsLVADGVAER (S) S(0.0)VIVIRS(0.99)LVADGVAER s:Phosphorylated S PATJ 197163.3 1 11 127.1 542.92 HUMAN 1 -5.0059 -0.5675 RSVQRKVSPASGVSK-p Q9UNY4;S396-p RSVQRKVSPASGVSK 0.147752489627941 0.00254880172900523 -0.238666666666667 -0.923333333333333 16.8543315569488 39.6466176766825 -0.238666666666667 -0.923333333333334 0.0206332121833959 0.000108477141456868 -3.23399893700567 -9.97354270284156 Q9UNY4 TTF2 Q9UNY4.S396.p_TTF2 Q9UNY4_S396s _1_1_396_396 Q9UNY4 Q9UNY4|Q9UNY4-2 Transcription termination factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9192.9192.3 10.73 5.95 2.28 3 1 1 0 576.3409 1647.0408 S396s TMT10 394 (R) KVsPASGVSK (K) KVS(0.99)PAS(0.0)GVS(0.0)K K:TMT10,s:Phosphorylated S TTF2 130841 1 1 3266.1 55.57 HUMAN 1 -16.8543 -39.6466 RSVQRVHSFQQDKSD-p Q7Z2Z1;S1045-p RSVQRVHSFQQDKSD 0.330021163399156 0.0131166768270829 -0.191666666666667 -1.20166666666667 8.99973519753893 26.2153693383562 -0.191666666666667 -1.20166666666667 0.125900217461862 0.00239035864271489 -1.80831700481779 -5.35121984875104 Q7Z2Z1 TICRR Q7Z2Z1.S1045.p_TICRR Q7Z2Z1_S1045s _1_1_1045_1045 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7932.7932.3 8.81 8.81 99 1 1 1 0 509.5975 1446.8105 S1045s TMT10 1043 (R) VHsFQQDK (S) VHS(1.0)FQQDK K:TMT10,s:Phosphorylated S TICRR 212850 1 10 238.1 417.32 HUMAN 1 -8.9997 -26.2154 RSVSEINSDDELSGK-p P82094-2;S344-p RSVSEINSDDELSGK 0.6525879959072 0.120732779557619 -0.0616666666666667 -0.217 3.47562817981041 12.1054327331619 -0.0616666666666667 -0.217 0.449197346383859 0.0615824165034946 -0.815467445823986 -2.3498648366545 P82094 TMF1 P82094.2.S344.p_TMF1 P82094-2_S344s _1_1_344_344 P82094-2 P82094-2 Isoform 2 of TATA element modulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30147.30147.5 22.82 22.82 3.21 8 1 1 0 758.2045 3707.0358 S344s TMT10 338 (R) SVSEINsDDELSGKGYALVPIIVNSSTPK (S) S(0.0)VS(0.0)EINS(0.99)DDELS(0.0)GKGY(0.0)ALVPIIVNS(0.0)S(0.0)T(0.0)PK K:TMT10,s:Phosphorylated S TMF1 123666.4 10 11 393.1 331.84 HUMAN 1 -3.4756 -12.1054 RSVSRLPSKPKEEVP-p O43683;S563-p RSVSRLPSKPKEEVP 0.543328167061294 0.00185469371649783 0.131 -0.884666666666667 4.89089792655501 42.9226203730378 0.131 -0.884666666666667 0.324272565369073 5.10197072955621e-05 1.08402613515661 -11.5273688172142 O43683 BUB1 O43683.S563.p_BUB1 O43683_S563s _1_1_563_563 O43683 O43683|O43683-3|O43683-2 Mitotic checkpoint serine/threonine-protein kinase BUB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23302.23302.4 13.94 13.94 13.941 3 1 1 0 855.1917 3337.7833 S563s Hydrogen 561 (R) LPsKPKEEVPHAEEFLDDSTVWGIR (C) LPS(0.99)KPKEEVPHAEEFLDDS(0.0)T(0.0)VWGIR K:TMT10-Lys-Only,s:Phosphorylated S BUB1 123514.1 1 4 1341.1 151.76 HUMAN 1 4.8909 -42.9226 RSVVGFLSQRGLHGD-p Q96JK2;S19-p RSVVGFLSQRGLHGD 0.159068785438629 0.210002490099544 0.267 -0.156 15.9919283774122 8.91637302155906 0.267 -0.156 0.0251655926363877 0.128340195892955 3.06664060178234 -1.79324806249985 Q96JK2 DCAF5 Q96JK2.S19.p_DCAF5 Q96JK2_S19s _1_1_19_19 Q96JK2 Q96JK2|Q96JK2-3|Q8TBB7 DDB1- and CUL4-associated factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20051.20051.2 9.03 9.03 3.068 2 1 1 0 651.3487 1221.7153 S19s TMT10 13 (R) SVVGFLsQR (G) S(0.0)VVGFLS(0.99)QR s:Phosphorylated S DCAF5 105045.5 1 2 948.1 196.79 HUMAN 1 15.9919 -8.9164 RSWKYNQSISLRRPR-p Q9UBH6;S666-p RSWKYNQSISLRRPR 0.806490904011309 0.0430095027967312 0.058 -0.416 1.79966782774986 18.308931571003 0.058 -0.416 0.66074398340041 0.0147606962368509 0.463965346993969 -3.52211305747551 Q9UBH6 XPR1 Q9UBH6.S666.p_XPR1 Q9UBH6_S666s _1_1_666_666 Q9UBH6 Q9UBH6|Q9UBH6-2 Xenotropic and polytropic retrovirus receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12335.12335.2 11.29 4.95 2.701 3 1 1 0 645.3266 1209.6789 S666s TMT10 663 (K) YNQsISLR (R) Y(0.0)NQS(0.99)IS(0.0)LR s:Phosphorylated S XPR1 82218.3 1 1 5431.1 19.38 HUMAN 1 1.7997 -18.3089 RSWQGDGSPMANGAG-p Q9H201;S264-p RSWQGDGSPMANGAG 0.275495542064131 0.343881984312331 0.240666666666667 0.105 10.5934775552252 6.14146866862899 0.240666666666667 0.105 0.0872272627981845 0.24313816413143 2.08503334318164 1.30940772066866 Q9H201 EPN3 Q9H201.S264.p_EPN3 Q9H201_S264s _1_1_264_264 Q9H201 Q9H201|I6L9I8 Epsin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10237.10237.3 25.58 25.58 6.142 2 1 1 0 824.3804 2391.1574 S264s TMT10 258 (R) SWQGDGsPMANGAGAVVHHQR (D) S(0.0)WQGDGS(0.99)PMANGAGAVVHHQR s:Phosphorylated S EPN3 68392.2 12 6 953.1 196.01 HUMAN 1 10.5935 6.1415 RSYKRTFSEPGDHPG-p Q9HA47;S253-p RSYKRTFSEPGDHPG 0.772883727112607 0.823510283623829 -0.0423333333333333 0.0276666666666667 2.13936398349239 1.18166282489719 -0.0423333333333334 0.0276666666666667 0.611031502825105 0.761787281384597 -0.539448680120113 0.318813529259108 Q9HA47 UCK1 Q9HA47.S253.p_UCK1 Q9HA47_S253s _1_1_253_253 Q9HA47 Q9HA47-4|Q9HA47-3 Uridine-cytidine kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12362.12362.3 16.48 16.48 2.329 4 1 1 0 785.7231 2275.1905 S253s TMT10 251 (R) TFsEPGDHPGMLTSGKR (S) T(0.0)FS(0.99)EPGDHPGMLT(0.0)S(0.0)GKR K:TMT10,s:Phosphorylated S UCK1 31662.3 8 2 2617.1 76.65 HUMAN 1 -2.1394 1.1817 RSYPKSNSSKEYV__-p O95471;S206-p RSYPKSNSSKEYV__ 0.419035843671977 0.011783186674255 0.435333333333333 -1.16966666666667 6.97350237234715 26.9594823654834 0.435333333333333 -1.16966666666667 0.200747323077375 0.00201396427946087 1.45637414155374 -5.55014847599798 O95471 CLDN7 O95471.S206.p_CLDN7 O95471_S206s _1_1_206_206 O95471 O95471 Claudin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10235.10235.2 8.67 8.67 8.668 4 1 1 0 726.3626 1371.752 S206s TMT10 204 (K) SNsSKEYV (-) S(0.0)NS(0.99)S(0.0)KEY(0.0)V K:TMT10,s:Phosphorylated S CLDN7 22874.6 2 1 6920.1 8.67 HUMAN 1 6.9735 -26.9595 RTADGRVSPAGGTLD-p Q8WY36;S844-p RTADGRVSPAGGTLD 0.936325615209413 0.0368615028203003 0.0143333333333333 0.396333333333333 0.556041137368293 19.2801047828785 0.0143333333333333 0.396333333333333 0.879824165506333 0.0118029215822294 0.158481444350693 3.72280337164478 Q8WY36 BBX Q8WY36.S844.p_BBX Q8WY36_S844s _1_1_844_844 Q8WY36 Q8WY36|Q8WY36-2|C9JA69 HMG box transcription factor BBX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10488.10488.5 16.64 16.64 2.565 3 1 1 0 642.1488 3126.7474 S844s TMT10 838 (R) TADGRVsPAGGTLDDKPKEQLQR (S) T(0.0)ADGRVS(0.99)PAGGT(0.0)LDDKPKEQLQR K:TMT10,s:Phosphorylated S BBX 106212.3 7 9 621.1 259.66 HUMAN 1 0.556 19.2801 RTAERQKSQLQRLLQ-p Q8N163;S883-p RTAERQKSQLQRLLQ 0.0444873405743474 0.0344585108087388 0.538333333333333 0.379333333333333 30.0284816937306 19.7075858562309 0.538333333333333 0.379333333333333 0.00099346330540698 0.0106964930759658 6.44079386382009 3.81297272740323 Q8N163 CCAR2 Q8N163.S883.p_CCAR2 Q8N163_S883s _1_1_883_883 Q8N163 Q8N163|Q8N163-2|G3V119 Cell cycle and apoptosis regulator protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.4519.4519.3 7.26 7.26 99 1 1 1 0 475.9373 1345.8316 S883s TMT10 881 (R) QKsQLQR (L) QKS(1.0)QLQR K:TMT10,s:Phosphorylated S CCAR2 103527.3 1 9 891.1 204.52 HUMAN 1 30.0285 19.7076 RTAITTASIRRHRWR-p Q8IXS8;S321-p RTAITTASIRRHRWR 0.161455043097139 0.0345052639513176 0.229666666666667 -0.615 15.8536412836638 19.6987871274534 0.229666666666667 -0.615 0.0259798040802528 0.0107181859475065 3.04013804358612 -3.81110512166105 Q8IXS8 FAM126B Q8IXS8.S321.p_FAM126B Q8IXS8_S321s _1_1_321_321 Q8IXS8 Q8IXS8 Protein FAM126B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7641.7641.2 7.56 5.41 1.1 4 1 1 0 699.8878 1318.8004 S321s TMT10 315 (R) TAITTAsIRR (H) T(0.0)AIT(0.0)T(0.0)AS(0.99)IRR s:Phosphorylated S FAM126B 59101.9 2 2 955.1 195.77 HUMAN 1 15.8536 -19.6988 RTAKAYHSLKD____-p Q99959;S878-p RTAKAYHSLKD____ 0.167300432977981 0.218466675207213 -0.376 -0.177666666666667 15.5258281284768 8.69302463930809 -0.376 -0.177666666666667 0.0280167133787201 0.135113124152249 -2.97766478307726 -1.75461710685568 Q99959 PKP2 Q99959.S878.p_PKP2 Q99959_S878s _1_1_878_878 Q99959 Q99959 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7461.7461.3 10.35 10.35 10.347 2 1 1 0 457.9073 1291.7411 S878s TMT10 875 (K) AYHsLKD (-) AY(0.0)HS(0.99)LKD K:TMT10,s:Phosphorylated S PKP2 97926.6 1 20 257.1 399.17 HUMAN 1 -15.5258 -8.693 RTANEKTTPFPAEPT-p A0A1B0GV46;T801-p RTANEKTTPFPAEPT 0.992821359885708 0.012159953222783 0.00999999999999994 0.594 0.064122107717434 26.7370856639142 0.00999999999999986 0.594 0.985343802206808 0.00211978313999982 0.0192339114025736 5.49013204941017 A0A1B0GV46 NotFound A0A1B0GV46.T801.p_NotFound A0A1B0GV46_T800tT801tT808t_3_3_800_808 A0A1B0GV46 A0A1B0GV46 Diffuse panbronchiolitis critical region protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11860.11860.5 8.46 5.44 1.247 9 3 3 0 939.9993 4453.2069 N778n N780n N797n T800t T801t T808t Hydrogen 774 (R) TPLAnEnTTLSPAEPTENRERTAnEKttPFPAEPtENR (E) T(0.0)PLAN(0.99)EN(0.99)T(0.0)T(0.0)LS(0.0)PAEPT(0.0)EN(0.0)RERT(0.0)AN(0.99)EKT(0.99)T(0.99)PFPAEPT(0.99)EN(0.0)R K:TMT10-Lys-Only,n:Deamidated,t:Phosphorylated T DPCR1 158728 1 4 5532.1 18.44 HUMAN 1 0.0641 26.7371 RTAPRPGSQEQAGKD-p Q8N8Q3-3;S255-p RTAPRPGSQEQAGKD 0.0360407965324359 0.0306554662810929 -0.575 -0.278333333333333 33.2690352455479 20.4536155962613 -0.575 -0.278333333333333 0.000471081962298057 0.00900820872324263 -7.49178043695154 -3.97315858845231 Q8N8Q3 ENDOV Q8N8Q3.3.S255.p_ENDOV Q8N8Q3-3_S255s _1_1_255_255 Q8N8Q3-3 Q8N8Q3-3|I3L0L4 Isoform 3 of Endonuclease V HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4765.4765.3 11.07 11.07 11.07 2 1 1 0 622.3278 1785.0019 S255s TMT10 249 (R) TAPRPGsQEQAGK (D) T(0.0)APRPGS(0.99)QEQAGK K:TMT10,s:Phosphorylated S ENDOV 29015.5 2 5 2332.1 87.5 HUMAN 1 -33.269 -20.4536 RTARGKRSLTRSPPA-p Q9UQ35;S2067-p RTARGKRSLTRSPPA 0.732651492896551 0.559030464172909 -0.106833333333333 0.210666666666667 2.55911781930564 3.40484598444704 -0.106833333333333 0.210666666666667 0.554738385306733 0.456578441735221 -0.629347813536295 0.801385545574436 Q9UQ35 SRRM2 Q9UQ35.S2067.p_SRRM2 Q9UQ35_S2067sT2069t_2_2_2067_2069 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8297.8503.2 9.32 6.36 1.908 3 2 2 0 629.2916 1097.6426 S2067s T2069t Hydrogen 2067 (R) sLtRSPPAIR (R) S(0.99)LT(0.99)RS(0.0)PPAIR s:Phosphorylated S,t:Phosphorylated T SRRM2 300351.7 4 236 2.1 3310.34 HUMAN 2 -2.5591 3.4048 RTASDQESGDEELNR-p Q9BXL6;S259-p RTASDQESGDEELNR 0.772582000372314 0.37288104214687 0.068 0.0866666666666667 2.14335484369132 5.68366622583864 0.068 0.0866666666666667 0.610470265847477 0.270167670056058 0.540320046052497 1.2277217983084 Q9BXL6 CARD14 Q9BXL6.S259.p_CARD14 Q9BXL6_S259s _1_1_259_259 Q9BXL6 Q9BXL6|Q9BXL6-2 Caspase recruitment domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5225.5583.2 16.87 16.87 2.437 3 1 1 0 930.3966 1779.8194 S259s TMT10 253 (R) TASDQEsGDEELNR (L) T(0.0)AS(0.0)DQES(0.99)GDEELNR s:Phosphorylated S CARD14 114922.3 4 4 816.1 219.94 HUMAN 1 2.1434 5.6837 RTASETRSEGSEYEE-p P48634;S1089-p RTASETRSEGSEYEE 0.341280214844005 0.74743490444788 -0.130666666666667 0.0333333333333334 8.6742117508835 1.74501722048413 -0.130666666666667 0.0333333333333334 0.135699680431694 0.669111166905753 -1.75196817849708 0.451513326819413 P48634 PRRC2A P48634.S1089.p_PRRC2A P48634_S1089sS1092s_2_2_1089_1092 P48634 P48634 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17568.17568.3 8.06 5.16 1.865 3 2 2 0 629.2815 1725.8947 S1089s S1092s TMT10 1089 (R) sEGsEYEEIPK (R) S(0.99)EGS(0.99)EY(0.0)EEIPK K:TMT10,s:Phosphorylated S PRRC2A 229315.4 12 39 36.1 882.05 HUMAN 1 -8.6742 1.745 RTCECHESIEKNKDK-p Q8TEP8-3;S457-p RTCECHESIEKNKDK 0.19675938921535 0.0047629261337893 -0.211 -0.903666666666667 13.7580684571375 33.949509099164 -0.211 -0.903666666666667 0.0420913789928476 0.000402762557653653 -2.64860592932448 -7.71538361195552 Q8TEP8 NotFound Q8TEP8.3.S457.p_NotFound Q8TEP8-3_S457s _1_1_457_457 Q8TEP8-3 Q8TEP8-3|A0A0A0MR42 Isoform 3 of Centrosomal protein of 192 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6779.6779.3 15.98 14.92 10.336 2 1 1 0 610.9434 1750.8504 S457s TMT10 451 (R) TCECHEsIEK (N) T(0.0)CECHES(0.99)IEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CEP192 281787.5 1 5 491.1 293.99 HUMAN 1 -13.7581 -33.9495 RTDALTSSPGRDLPP-p P49736;S41-p RTDALTSSPGRDLPP 0.517913844218022 0.924133970760431 0.113666666666667 0.0133333333333333 5.27787731191168 0.483163732239568 0.113666666666667 0.0133333333333333 0.296628085544975 0.894712751082886 1.15474548158122 0.138674039505645 P49736 MCM2 P49736.S41.p_MCM2 P49736_S40sS41s_2_2_40_41 P49736 P49736|F8WDM3 DNA replication licensing factor MCM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6174.6174.3 7.54 7.54 1.365 4 2 2 0 517.2372 1389.7648 S40s S41s TMT10 34 (R) RTDALTssPGR (D) RT(0.0)DALT(0.0)S(0.99)S(0.99)PGR s:Phosphorylated S MCM2 102579 5 13 259.1 397.63 HUMAN 1 5.2779 0.4832 RTDGRRWSLASLPSS-p Q6P0Q8;S230-p RTDGRRWSLASLPSS 0.701857680860892 0.0523716320006097 0.0523333333333333 0.277 2.88954169323986 17.0918619343038 0.0523333333333333 0.277 0.514097900973464 0.0195350175879756 0.697886264937656 3.27823487249726 Q6P0Q8 MAST2 Q6P0Q8.S230.p_MAST2 Q6P0Q8_S230s_1_1_230_230 Q6P0Q8 O15021|J3QT34|O15021-1|E7EWQ5|O15021-3|O15021-2|Q6P0Q8|Q6P0Q8-2|D6RAK1|F8WBH1 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20082.20082.4 10.54 10.54 1.306 15 1 1 0 922.6919 3606.7746 S230s N242n TMT10 228 (R) RWsLASLPSSGYGTnTPSSTVSSSCSSQEK (L) RWS(0.99)LAS(0.0)LPS(0.0)S(0.0)GY(0.0)GT(0.0)N(1.0)T(0.0)PS(0.0)S(0.0)T(0.0)VS(0.0)S(0.0)S(0.0)CS(0.0)S(0.0)QEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated MAST2 197687.5 3 41 121.1 549.41 HUMAN 1 2.8895 17.0919 RTDKSSASAPDVDDP-p Q8NC51;S394-p RTDKSSASAPDVDDP 0.039271926938295 0.0086777312522388 -0.526 -0.466333333333333 31.8004578354489 29.2478736756583 -0.526 -0.466333333333333 0.000660623801039864 0.00118908426567888 -6.99917891158015 -6.19701168234129 Q8NC51 SERBP1 Q8NC51.S394.p_SERBP1 Q8NC51_S394s _1_1_394_394 Q8NC51 Q8NC51|Q8NC51-2|Q8NC51-3|Q8NC51-4 Plasminogen activator inhibitor 1 RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28097.28097.2 17.82 17.82 2.172 3 1 1 0 1034.9702 1988.965 S394s TMT10 391 (K) SSAsAPDVDDPEAFPALA (-) S(0.0)S(0.0)AS(0.99)APDVDDPEAFPALA s:Phosphorylated S SERBP1 45021.6 4 12 616.1 261.14 HUMAN 1 -31.8005 -29.2479 RTDSLAATPPAAKCS-p Q9Y4H2;T350-p RTDSLAATPPAAKCS 0.600340886630407 0.619145561952698 -0.0933333333333334 0.0673333333333333 4.09350920882284 2.8292558309162 -0.0933333333333333 0.0673333333333334 0.389627030990948 0.52128402612947 -0.934962284905859 0.685420503843472 Q9Y4H2 IRS2 Q9Y4H2.T350.p_IRS2 Q9Y4H2_T350t _1_1_350_350 Q9Y4H2 Q9Y4H2 Insulin receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12886.12886.3 7.24 7.24 7.245 3 1 1 0 560.9705 1600.931 T350t TMT10 344 (R) TDSLAAtPPAAK (C) T(0.0)DS(0.0)LAAT(0.99)PPAAK K:TMT10,t:Phosphorylated T IRS2 138529.8 1 1 1344.1 151.43 HUMAN 1 -4.0935 2.8293 RTEAREESEPEVKED-p E9PGC8;S882-p RTEAREESEPEVKED 0.238905427298457 0.019380298893346 -0.227666666666667 0.346666666666667 11.8902177882279 23.5285757182311 -0.227666666666667 0.346666666666667 0.0647110163917963 0.00443754150574044 -2.31287731354831 4.67511332609811 E9PGC8 NotFound E9PGC8.S882.p_NotFound E9PGC8_S882s _1_1_882_882 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15281.15281.3 12.92 12.92 99 1 1 1 0 733.3671 2118.1218 S882s Hydrogen 880 (R) EEsEPEVKEDVIEK (A) EES(1.0)EPEVKEDVIEK K:TMT10-Lys-Only,s:Phosphorylated S MAP1A 332906.7 1 11 20.1 1016.98 HUMAN 1 -11.8902 23.5286 RTEEGQASPVKTCRD-p Q3KQV3;S196-p RTEEGQASPVKTCRD 0.175973502111451 0.00493055216620731 -0.355333333333333 -0.530333333333333 14.9965787560564 33.6596658619617 -0.355333333333333 -0.530333333333334 0.0316476979080264 0.000430559735676856 -2.87780953952462 -7.61358246721222 Q3KQV3 ZNF792 Q3KQV3.S196.p_ZNF792 Q3KQV3_S196s _1_1_196_196 Q3KQV3 Q3KQV3 Zinc finger protein 792 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8845.8845.4 18.73 18.73 2.466 2 1 1 0 725.1312 2817.5372 S196s TMT10 179 (K) QVQQNVHNPIRTEEGQAsPVK (T) QVQQNVHNPIRT(0.0)EEGQAS(0.99)PVK K:TMT10,s:Phosphorylated S ZNF792 73744.2 1 1 4984.1 24.19 HUMAN 1 -14.9966 -33.6597 RTEKPSKSPPPPPPR-p A0A087X165;S1037-p RTEKPSKSPPPPPPR 0.447395794331388 0.723500249797033 0.100666666666667 0.038 6.44272484535469 1.93427443258668 0.100666666666667 0.038 0.226844114261317 0.640578792893249 1.36306734595819 0.494140253808781 A0A087X165 NotFound A0A087X165.S1037.p_NotFound A0A087X165_S1037s _1_1_1037_1037 A0A087X165 A0A087X165|Q9C0H9-5|Q9C0H9-2 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6951.6951.5 9.42 9.42 1.14 4 1 1 0 521.0964 2521.4858 S1037s TMT10 1029 (R) YRTEKPSKsPPPPPPR (R) Y(0.0)RT(0.0)EKPS(0.0)KS(0.99)PPPPPPR K:TMT10,s:Phosphorylated S SRCIN1 130745.5 13 29 98.1 603.22 HUMAN 1 6.4427 1.9343 RTFDSPDSDEEEMKV-p Q9H6X5;S213-p RTFDSPDSDEEEMKV 0.848303400988284 0.106189212642225 -0.03 0.264 1.38079730133136 12.8680363623988 -0.03 0.264 0.727646207042286 0.0516649916767344 -0.366846593472798 2.48596732537691 Q9H6X5 C19orf44 Q9H6X5.S213.p_C19orf44 Q9H6X5_S213s _1_1_213_213 Q9H6X5 Q9H6X5|M0R2B3|Q9H6X5-2|M0QZ23 Uncharacterized protein C19orf44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11855.11855.2 17.45 17.45 1.747 3 1 1 0 919.8671 1758.7577 S213s Hydrogen 207 (R) TFDSPDsDEEEMK (V) T(0.0)FDS(0.0)PDS(0.99)DEEEMK K:TMT10-Lys-Only,s:Phosphorylated S C19orf44 71455.9 3 2 3449.1 50.73 HUMAN 1 -1.3808 12.868 RTFNEPGSPIVKSAK-p Q8WWQ0;S1243-p RTFNEPGSPIVKSAK 0.690167617914824 0.612238582904788 -0.069 -0.0786666666666666 3.01835543736183 2.89554307410391 -0.069 -0.0786666666666667 0.499073438087709 0.513387975640113 -0.724138034800867 -0.699018705078877 Q8WWQ0 PHIP Q8WWQ0.S1243.p_PHIP Q8WWQ0_S1243s _1_1_1243_1243 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17993.17993.3 9.12 9.12 9.116 2 1 1 0 576.3124 1646.9518 S1243s TMT10 1237 (R) TFNEPGsPIVK (S) T(0.0)FNEPGS(0.99)PIVK K:TMT10,s:Phosphorylated S PHIP 208454.1 1 9 108.1 577.05 HUMAN 1 -3.0184 -2.8955 RTFPLAHSPQAECED-p Q7Z3B3;S1045-p RTFPLAHSPQAECED 0.913103740581483 0.708658585868283 0.0193333333333333 -0.0406666666666667 0.770168203307701 2.05627099429406 0.0193333333333333 -0.0406666666666667 0.83749684504251 0.622834843620641 0.21519047567915 -0.521166763854433 Q7Z3B3 KANSL1 Q7Z3B3.S1045.p_KANSL1 Q7Z3B3_S1045s _1_1_1045_1045 Q7Z3B3 Q7Z3B3|A0A0G2JQF4|A0A0G2JNT7|A0A0G2JNB1|A0A0G2JQF5|A0A1W2PRB5|A0A0J9YVS1|Q7Z3B3-2|Q7Z3B3-4 KAT8 regulatory NSL complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15990.16013.4 24.18 24.18 3.745 2 1 1 0 688.562 2671.262 S1045s TMT10 1039 (R) TFPLAHsPQAECEDQLDAQER (A) T(0.0)FPLAHS(0.99)PQAECEDQLDAQER C:Carbamidomethylation,s:Phosphorylated S KANSL1 121821.3 6 11 391.1 332.08 HUMAN 1 0.7702 -2.0563 RTFSRSGSISVKIIR-p Q8TF01;S726-p RTFSRSGSISVKIIR 0.053164661743746 0.0203620833082504 0.426333333333333 0.478666666666667 27.6698736635063 23.1588627448132 0.426333333333333 0.478666666666667 0.00171006506024949 0.00483185313677821 5.75333413981249 4.5868999517536 Q8TF01 PNISR Q8TF01.S726.p_PNISR Q8TF01_S726s _1_1_726_726 Q8TF01 Q8TF01 Arginine/serine-rich protein PNISR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10398.10398.2 11.38 4.83 2.099 3 1 1 0 608.3419 1135.7087 S726s TMT10 724 (R) SGsISVK (I) S(0.0)GS(0.99)IS(0.0)VK K:TMT10,s:Phosphorylated S PNISR 92575.2 2 8 613.1 261.5 HUMAN 1 27.6699 23.1589 RTFTEMDSHEEKVFR-p B0YIW6;S179-p RTFTEMDSHEEKVFR 0.10854647135141 0.0387970800964784 -0.374666666666667 -0.319 20.2254448840871 18.9477421140741 -0.374666666666667 -0.319 0.00949413737846984 0.0127416534415737 -3.92750117919714 -3.65348340675708 B0YIW6 NotFound B0YIW6.S179.p_NotFound B0YIW6_S179s _1_1_179_179 B0YIW6 B0YIW6|P48444|P48444-2|Q6P1Q5 Archain 1, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11443.11443.3 15.07 15.07 6.379 3 1 1 0 631.2885 1811.8886 S179s TMT10 173 (R) TFTEMDsHEEK (V) T(0.0)FT(0.0)EMDS(0.99)HEEK K:TMT10,s:Phosphorylated S ARCN1 62195.8 3 1 1797.1 114.24 HUMAN 1 -20.2254 -18.9477 RTGIVDISILTTGMS-p P33991;S784-p RTGIVDISILTTGMS 0.764384366850706 0.896916293211812 0.0623333333333333 -0.022 2.23921305488579 0.662559480000902 0.0623333333333333 -0.022 0.597143479662748 0.858507417864734 0.56114914418973 -0.186934959965727 P33991 MCM4 P33991.S784.p_MCM4 P33991_S784s _1_1_784_784 P33991 P33991 DNA replication licensing factor MCM4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32695.32695.3 12.97 12.97 2.033 7 1 1 0 711.3674 2052.1208 S784s TMT10 778 (R) TGIVDIsILTTGMSATSR (K) T(0.0)GIVDIS(0.99)ILT(0.0)T(0.0)GMS(0.0)AT(0.0)S(0.0)R s:Phosphorylated S MCM4 97126.8 1 9 1487.1 137.87 HUMAN 1 2.2392 -0.6626 RTGPPPISPSKRKFS-p Q14135-4;S58-p RTGPPPISPSKRKFS 0.30696215480319 0.0173615564197841 -0.143666666666667 -0.338 9.5915613281035 24.274907183623 -0.143666666666667 -0.338 0.109861080786544 0.00373688111669643 -1.91082952485915 -4.85661249574655 Q14135 VGLL4 Q14135.4.S58.p_VGLL4 Q14135-4_S58s _1_1_58_58 Q14135-4 Q14135-4|G5E9M7|A0A0A6YYI5|A0A075B6E4|Q14135-2 Isoform 4 of Transcription cofactor vestigial-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12329.12329.2 13.57 7.56 1.828 3 1 1 0 759.9205 1438.867 S58s TMT10 52 (R) TGPPPIsPSK (R) T(0.0)GPPPIS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S VGLL4 32338.7 4 1 3252.1 55.83 HUMAN 1 -9.5916 -24.2749 RTHFPQFSYSASIRE-p P31751;S474-p RTHFPQFSYSASIRE 0.540233736657724 0.0033889360602677 -0.185 -2.43833333333333 4.93610113847685 36.9321555428737 -0.185 -2.43833333333333 0.320914903253188 0.000202667656523562 -1.09233518024137 -8.83348045062756 P31751 AKT2 P31751.S474.p_AKT2 P31751_S474s _1_1_474_474 P31751 P31751|P31751-2 RAC-beta serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18731.18731.3 11.42 11.42 1.13 5 1 1 0 660.3138 1898.9598 S474s TMT10 468 (R) THFPQFsYSASIRE (-) T(0.0)HFPQFS(0.99)Y(0.0)S(0.0)AS(0.0)IRE s:Phosphorylated S AKT2 56167.2 1 11 1794.2 114.3 HUMAN 1 -4.9361 -36.9322 RTHQRSKSDATASIS-p Q9UBF8-2;S277-p RTHQRSKSDATASIS 0.131539706649705 0.00775531376968322 -0.519333333333333 -0.469666666666667 18.1920343865458 30.1184900745716 -0.519333333333333 -0.469666666666667 0.0151633989467168 0.000973085480693949 -3.50123409108154 -6.45796603999811 Q9UBF8 PI4KB Q9UBF8.2.S277.p_PI4KB Q9UBF8-2_S277s _1_1_277_277 Q9UBF8-2 A0A0B4J1S8|Q9UBF8|Q9UBF8-2 Isoform 2 of Phosphatidylinositol 4-kinase beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17806.17806.2 17.68 17.68 1.466 7 1 1 0 1188.6512 2296.3327 S277s TMT10 275 (R) SKsDATASISLSSNLK (R) S(0.0)KS(0.99)DAT(0.0)AS(0.0)IS(0.0)LS(0.0)S(0.0)NLK K:TMT10,s:Phosphorylated S PI4KB 90547.4 5 4 325.1 361.79 HUMAN 1 -18.192 -30.1185 RTHVRIHTGDRPYVC-p P25490;T378-p RTHVRIHTGDRPYVC 0.427483839751622 0.0145497038675128 -0.115 -0.46 6.79610636261302 25.4512194594538 -0.115 -0.46 0.209117011489683 0.00285021783985479 -1.425273357418 -5.15238944108792 P25490 YY1 P25490.T378.p_YY1 P25490_T378t _1_1_378_378 P25490 P25490 Transcriptional repressor protein YY1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13824.13824.3 17.96 15.78 9.529 2 1 1 0 858.7405 2494.2372 T378t TMT10 376 (R) IHtGDRPYVCPFDGCNK (K) IHT(0.99)GDRPY(0.0)VCPFDGCNK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T YY1 45168.2 4 7 1217.1 165.22 HUMAN 1 -6.7961 -25.4512 RTIQRRDSFIGTPYW-p Q9H2G2;S189-p RTIQRRDSFIGTPYW 0.657493781284077 0.165843518491649 -0.0636666666666667 0.141666666666667 3.41617376458631 10.2612148806009 -0.0636666666666667 0.141666666666667 0.455389091848427 0.0941626152382382 -0.803745331745474 2.02628753548817 Q9H2G2 SLK Q9H2G2.S189.p_SLK Q9H2G2_S189s _1_1_189_189 Q9H2G2 Q9H2G2|Q9H2G2-2 STE20-like serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30383.30641.3 22.92 22.92 3.113 5 1 1 0 971.7783 2833.3561 S189s Hydrogen 187 (R) RDsFIGTPYWMAPEVVMCETSK (D) RDS(0.99)FIGT(0.0)PY(0.0)WMAPEVVMCET(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S SLK 143320 27 3 329.1 359.67 HUMAN 1 -3.4162 10.2612 RTISVSGSTAKETVT-p Q8TDJ6-3;S1404-p RTISVSGSTAKETVT 0.0350618685416583 0.00630838540915913 -0.616333333333333 -0.521333333333333 33.9326374148994 31.678051064815 -0.616333333333334 -0.521333333333333 0.000404330272515872 0.000679508499700106 -7.72380110986632 -6.94754177121805 Q8TDJ6 DMXL2 Q8TDJ6.3.S1404.p_DMXL2 Q8TDJ6-3_S1404s _1_1_1404_1404 Q8TDJ6-3 Q8TDJ6-3 Isoform 3 of DmX-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11961.11961.2 12.45 6.99 1.133 5 1 1 0 744.905 1408.8412 S1404s TMT10 1398 (R) TISVSGsTAK (E) T(0.0)IS(0.0)VS(0.0)GS(0.99)T(0.0)AK K:TMT10,s:Phosphorylated S DMXL2 343259.8 5 4 1366.1 149.7 HUMAN 1 -33.9326 -31.6781 RTITRQMSFDLTKLL-p Q9ULH0-4;S918-p RTITRQMSFDLTKLL 0.240968535804429 0.107220253402057 -0.24 -0.219666666666667 11.8130364482322 12.8112383333295 -0.24 -0.219666666666667 0.0658713182998053 0.0523451160122991 -2.29921573828098 -2.475773229389 Q9ULH0 KIDINS220 Q9ULH0.4.S918.p_KIDINS220 Q9ULH0-4_S918s_1_1_918_918 Q9ULH0-4 Q9ULH0|Q9ULH0-4|Q9ULH0-2|A0A1W2PPB7|Q9ULH0-3 Isoform 4 of Kinase D-interacting substrate of 220 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26175.26175.2 8.92 8.92 8.924 2 1 1 0 631.2903 1198.6339 Q916q S918s Hydrogen 916 (R) qMsFDLTK (L) Q(1.0)MS(0.99)FDLT(0.0)K K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S KIDINS220 196163.1 8 4 306.1 373.6 HUMAN 1 -11.813 -12.8112 RTIVAVGSMEEAVIL-p Q9UPX8-3;S1380-p RTIVAVGSMEEAVIL 0.890371578316635 0.270791951447825 -0.0216666666666667 0.130666666666667 0.985176497334289 7.4705804988702 -0.0216666666666667 0.130666666666667 0.797044098049508 0.179036652904889 -0.270155963472164 1.54270471191633 Q9UPX8 SHANK2 Q9UPX8.3.S1380.p_SHANK2 Q9UPX8-3_S1380s _1_1_1380_1380 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6|Q9UPX8-4|E7EUA2 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.36153.36556.3 19.05 19.05 6.957 2 1 1 0 714.3806 2061.1616 S1380s TMT10 1374 (R) TIVAVGsMEEAVILPFR (I) T(0.0)IVAVGS(0.99)MEEAVILPFR s:Phosphorylated S SHANK2 202341.2 10 23 86.1 628.23 HUMAN 1 -0.9852 7.4706 RTKEGVGSPKLGPGK-p Q5T4S7-2;S457-p RTKEGVGSPKLGPGK 0.182172012499362 0.0447919352870384 0.426333333333333 -0.445333333333333 14.550087597115 18.0536000007153 0.426333333333333 -0.445333333333333 0.0350744799365242 0.0156545288002226 2.79448789247825 -3.47026932614534 Q5T4S7 UBR4 Q5T4S7.2.S457.p_UBR4 Q5T4S7-2_S457s _1_1_457_457 Q5T4S7-2 Q5T4S7-2|Q5T4S7-4|Q5T4S7-3|Q5T4S7-5 Isoform 2 of E3 ubiquitin-protein ligase UBR4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.6868.6868.2 10.2 5.06 4.513 2 1 1 0 835.4774 1589.983 S457s TMT10 451 (R) TKEGVGsPK (L) T(0.0)KEGVGS(0.99)PK K:TMT10,s:Phosphorylated S UBR4 583136.9 3 5 528.1 281.83 HUMAN 1 14.5501 -18.0536 RTKIRPVSLPVDRLL-p Q52LW3;S1019-p RTKIRPVSLPVDRLL 0.195954837597201 0.00455061128120994 -0.340333333333333 -0.593333333333333 13.8015329126443 34.3194719761334 -0.340333333333333 -0.593333333333333 0.041672226864115 0.000369873146959271 -2.65655140072609 -7.84701772963671 Q52LW3 ARHGAP29 Q52LW3.S1019.p_ARHGAP29 Q52LW3_S1019s _1_1_1019_1019 Q52LW3 Q52LW3 Rho GTPase-activating protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16677.16677.3 10.4 9.37 99 1 1 1 0 487.6112 1380.8525 S1019s TMT10 1015 (K) IRPVsLPVDR (L) IRPVS(1.0)LPVDR s:Phosphorylated S ARHGAP29 143601.5 3 15 517.1 284.75 HUMAN 1 -13.8015 -34.3195 RTKKELASALKSALS-p P07355;S85-p RTKKELASALKSALS 0.770087115709017 0.0383760722253743 -0.044 0.31 2.17283019885456 19.0213758960094 -0.044 0.31 0.606341062060837 0.012527442279572 -0.546745231725218 3.66878270929296 P07355 ANXA2 P07355.S85.p_ANXA2 P07355_S85s _1_1_85_85 P07355 P07355-2|A6NMY6|H0YMU9 Annexin A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17819.17819.2 10.21 2.52 99 1 1 1 0 635.3648 1189.7556 S85s TMT10 82 (K) ELAsALK (S) ELAS(1.0)ALK K:TMT10,s:Phosphorylated S ANXA2 38831.6 2 6 537.1 277.57 HUMAN 1 -2.1728 19.0214 RTKMVSQSQPGSRSG-p E3W994;S455-p RTKMVSQSQPGSRSG 0.541137912596287 0.315236968297759 0.0826666666666667 0.136666666666667 4.91872669594736 6.62435454529041 0.0826666666666667 0.136666666666667 0.322201331197581 0.217552733999822 1.08914308121578 1.39471976839456 E3W994 NotFound E3W994.S455.p_NotFound E3W994_S455s _1_1_455_455 E3W994 O75122-3|E7EW49|E7ERI8|J3KR49|E3W994 CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5699.5699.2 12.9 12.9 1.116 3 1 1 0 693.3257 1305.6783 S455s TMT10 451 (K) MVSQsQPGSR (S) MVS(0.0)QS(0.99)QPGS(0.0)R s:Phosphorylated S CLASP2 139660.6 3 7 158.1 498.15 HUMAN 1 4.9187 6.6244 RTKRKAPSPPSKIPP-p Q53SF7;S404-p RTKRKAPSPPSKIPP 0.391781704474241 0.106284260548253 0.128333333333333 0.232666666666667 7.50319266049904 12.8619155121984 0.128333333333333 0.232666666666667 0.177697261100584 0.0517378585076391 1.54883821154922 2.48486828986681 Q53SF7 COBLL1 Q53SF7.S404.p_COBLL1 Q53SF7_S404s _1_1_404_404 Q53SF7 A0A0D9SG04|Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4|A0A0B4J1Z0 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5319.5570.4 17.71 17.71 2.841 4 1 1 0 653.3417 2530.3778 S404s Hydrogen 401 (R) KAPsPPSKIPPHQSDENSR (V) KAPS(0.99)PPS(0.0)KIPPHQS(0.0)DENS(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S COBLL1 132526.1 3 13 163.1 494.83 HUMAN 1 7.5032 12.8619 RTKSKARSQSVSPSK-p Q12872-2;S918-p RTKSKARSQSVSPSK 0.113413178970906 0.0417217648713714 0.326666666666667 0.451 19.7201795229191 18.4894906081591 0.326666666666667 0.451 0.0106655203259923 0.0141595985070554 3.81915356754622 3.55900103780302 Q12872 SFSWAP Q12872.2.S918.p_SFSWAP Q12872-2_S918sS920sS922s_3_3_918_922 Q12872-2 Q12872-2 Isoform 2 of Splicing factor, suppressor of white-apricot homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5809.5809.2 7.01 7.01 7.01 4 3 3 0 644.7455 1048.5836 S918s S920s S922s Hydrogen 918 (R) sQsVsPSK (Q) S(0.99)QS(0.99)VS(0.99)PS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S SFSWAP 110466.6 1 16 485.1 296.41 HUMAN 1 19.7202 18.4895 RTLEFKPYVIFIKPP-p Q5T2T1;Y482-p RTLEFKPYVIFIKPP 0.574777890570195 0.269610429958332 -0.0753333333333333 0.127666666666667 4.4231578001876 7.49595256513836 -0.0753333333333334 0.127666666666667 0.361147173296532 0.177993746126544 -0.997200577431732 1.54711953935722 Q5T2T1 MPP7 Q5T2T1.Y482.p_MPP7 Q5T2T1_Y482y _1_1_482_482 Q5T2T1 Q5T2T1 MAGUK p55 subfamily member 7 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.35073.35073.4 16.42 12.03 3.107 3 1 1 0 736.9286 2864.7257 Y482y TMT10 476 (R) TLEFKPyVIFIKPPSIER (L) T(0.0)LEFKPY(0.99)VIFIKPPS(0.0)IER K:TMT10,y:Phosphorylated Y MPP7 65693.7 2 2 128.1 24.62 HUMAN 1 -4.4232 7.496 RTLEPDSSDEEPPPV-p Q9NWM3;S123-p RTLEPDSSDEEPPPV 0.158894462563312 0.286646167838699 0.23 0.117 16.001261925181 7.15809042566539 0.23 0.117 0.0251115666118284 0.192393749007555 3.06843259065629 1.48823820409656 Q9NWM3 CUEDC1 Q9NWM3.S123.p_CUEDC1 Q9NWM3_S122sS123s_2_2_122_123 Q9NWM3 Q9NWM3|Q9NWM3-2 CUE domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25968.26228.5 28.85 29.45 3.958 8 2 2 0 957.845 4625.2649 S122s S123s TMT10 117 (R) TLEPDssDEEPPPVYSPPAYHMHVFDRPYPLAPPTPPPR (I) T(0.0)LEPDS(0.99)S(0.99)DEEPPPVY(0.0)S(0.0)PPAY(0.0)HMHVFDRPY(0.0)PLAPPT(0.0)PPPR s:Phosphorylated S CUEDC1 42428.4 2 3 2526.1 79.86 HUMAN 1 16.0013 7.1581 RTLKENLSDHLRNGS-p P30414;S866-p RTLKENLSDHLRNGS 0.804661397719842 0.0158797016689661 -0.0376666666666667 0.384333333333333 1.8195161505206 24.8625433215166 -0.0376666666666667 0.384333333333333 0.657731111399177 0.00326396631333072 -0.468450948790835 5.00284777801056 P30414 NKTR P30414.S866.p_NKTR P30414_S866s _1_1_866_866 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7534.7534.2 14.65 6.5 99 1 1 1 0 646.8133 1212.6534 S866s TMT10 863 (K) ENLsDHLR (N) ENLS(1.0)DHLR s:Phosphorylated S NKTR 166700.6 4 16 202.1 449.45 HUMAN 1 -1.8195 24.8625 RTLKWLISPVKIVSR-p Q8NCD3;S412-p RTLKWLISPVKIVSR 0.622191770659147 0.00134430048436996 0.0676666666666667 -1.074 3.82935715409877 46.6565203762893 0.0676666666666667 -1.074 0.414060959893132 2.15947391471473e-05 0.884367256675922 -13.5725302965463 Q8NCD3 HJURP Q8NCD3.S412.p_HJURP Q8NCD3_S412s _1_1_412_412 Q8NCD3 Q8NCD3|Q8NCD3-2|Q8NCD3-3 Holliday junction recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.26615.26615.2 9.95 4.95 99 1 1 1 0 690.9068 1300.8393 S412s TMT10 409 (K) WLIsPVK (I) WLIS(1.0)PVK K:TMT10,s:Phosphorylated S HJURP 84336.4 2 6 596.1 263.83 HUMAN 1 3.8294 -46.6565 RTLLRRATPHPGELK-p Q9BTT6;T480-p RTLLRRATPHPGELK 0.137325721125408 0.00319184557443355 0.379666666666667 0.843666666666667 17.6613817254585 37.4572950071061 0.379666666666667 0.843666666666667 0.0171341209179512 0.000179585182061706 3.3940568073705 9.04444243279976 Q9BTT6 LRRC1 Q9BTT6.T480.p_LRRC1 Q9BTT6_T480t _1_1_480_480 Q9BTT6 Q9BTT6 Leucine-rich repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5816.5816.4 11.25 11.25 99 1 1 1 0 411.7314 1563.9371 T480t TMT10 478 (R) RAtPHPGELK (H) RAT(1.0)PHPGELK K:TMT10,t:Phosphorylated T LRRC1 59982.4 4 57 22.3 1004.81 HUMAN 1 17.6614 37.4573 RTLLRTNSAEVTPPV-p A0A1C7CYX1;S700-p RTLLRTNSAEVTPPV 0.431086362849781 0.335478563792707 0.147 0.108666666666667 6.72763901610128 6.28754625372133 0.147 0.108666666666667 0.212439904928011 0.235096072899638 1.41324847718449 1.33529808646468 A0A1C7CYX1 NotFound A0A1C7CYX1.S700.p_NotFound A0A1C7CYX1_S700s _1_1_700_700 A0A1C7CYX1 A0A1C7CYX1|Q6PJG2 ELM2 and SANT domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31829.31829.2 19.3 19.3 2.448 6 1 1 0 1445.7284 2810.4807 S700s TMT10 698 (R) TNsAEVTPPVLSVMGEATPVSIEPR (I) T(0.0)NS(0.99)AEVT(0.0)PPVLS(0.0)VMGEAT(0.0)PVS(0.0)IEPR s:Phosphorylated S ELMSAN1 121244.8 7 6 548.1 275.48 HUMAN 1 6.7276 6.2875 RTLMRQQSLQQPLSQ-p O43581-3;S226-p RTLMRQQSLQQPLSQ 0.404907731878647 0.216370899350747 -0.113666666666667 -0.140333333333333 7.24953197972328 8.74566513044476 -0.113666666666667 -0.140333333333333 0.188385209309885 0.133485313855268 -1.50462565001868 -1.76372228266791 O43581 SYT7 O43581.3.S226.p_SYT7 O43581-3_S226s _1_1_226_226 O43581-3 O43581-3|O43581-4 Isoform 3 of Synaptotagmin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6860.6860.3 10.32 10.32 10.321 2 1 1 0 629.6537 1806.9772 S226s TMT10 224 (R) QQsLQQPLSQHQR (G) QQS(0.99)LQQPLS(0.0)QHQR s:Phosphorylated S SYT7 76194.9 1 4 1782.1 115.27 HUMAN 1 -7.2495 -8.7457 RTLNKLKSPKRPASP-p Q9H7L9;S228-p RTLNKLKSPKRPASP 0.41751649911322 0.0649865517810917 0.114 0.263666666666667 7.00186242823999 15.7968815343015 0.114 0.263666666666667 0.19944068502189 0.0263215734265569 1.46133921665496 3.02718041256885 Q9H7L9 SUDS3 Q9H7L9.S228.p_SUDS3 Q9H7L9_S228sS234s_2_2_228_234 Q9H7L9 Q9H7L9 Sin3 histone deacetylase corepressor complex component SDS3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12786.12786.5 17.48 11.08 2.095 6 2 2 0 838.2368 4027.2444 S228s S234s TMT10 226 (K) LKsPKRPAsPSSPEHLPATPAESPAQRFEAR (I) LKS(0.99)PKRPAS(0.99)PS(0.0)S(0.0)PEHLPAT(0.0)PAES(0.0)PAQRFEAR K:TMT10,s:Phosphorylated S SUDS3 38249.6 12 5 1096.1 178.23 HUMAN 1 7.0019 15.7969 RTLQNTPSLHSRHWG-p Q9Y5Y5-2;S183-p RTLQNTPSLHSRHWG 0.952789431211013 0.147144465082663 0.00999999999999999 -0.235 0.414811203930628 10.9590980216404 0.00999999999999999 -0.235 0.908905810070616 0.0801844579746767 0.119876834139565 -2.14798094439261 Q9Y5Y5 PEX16 Q9Y5Y5.2.S183.p_PEX16 Q9Y5Y5-2_S183s _1_1_183_183 Q9Y5Y5-2 Q9Y5Y5-2 Isoform 2 of Peroxisomal membrane protein PEX16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7696.7696.3 14.49 11.29 1.343 4 1 1 0 521.6016 1482.8226 S183s TMT10 177 (R) TLQNTPsLHSR (H) T(0.0)LQNT(0.0)PS(0.99)LHS(0.0)R s:Phosphorylated S PEX16 39383 1 1 6039.1 14.49 HUMAN 1 0.4148 -10.9591 RTLQPPESPRLGRRG-p Q86UU1;S443-p RTLQPPESPRLGRRG 0.71948805368516 0.0149879362389162 0.0813333333333333 -0.370666666666667 2.69961211849939 25.2493043306641 0.0813333333333334 -0.370666666666667 0.537079762441702 0.00298586086710608 0.6587106263077 -5.10074699613469 Q86UU1 PHLDB1 Q86UU1.S443.p_PHLDB1 Q86UU1_S443s _1_1_443_443 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8867.9486.2 10.58 6.35 10.579 2 1 1 0 667.3393 1253.7051 S443s TMT10 437 (R) TLQPPEsPR (L) T(0.0)LQPPES(0.99)PR s:Phosphorylated S PHLDB1 152129.1 6 8 99.1 600.41 HUMAN 1 2.6996 -25.2493 RTLQRLSSGFDDIDL-p Q9Y446-2;S329-p RTLQRLSSGFDDIDL 0.388754166810574 0.3936953859546 -0.127666666666667 -0.082 7.59029369227316 5.38232033870071 -0.127666666666667 -0.082 0.174168908743191 0.289579601499903 -1.56399557837567 -1.17342892552751 Q9Y446 PKP3 Q9Y446.2.S329.p_PKP3 Q9Y446-2_S329s _1_1_329_329 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29663.29882.2 14.56 14.56 1.105 3 1 1 0 1051.5457 2022.1159 S329s TMT10 327 (R) LSsGFDDIDLPSAVK (Y) LS(0.0)S(0.99)GFDDIDLPS(0.0)AVK K:TMT10,s:Phosphorylated S PKP3 89109.7 19 11 454.1 307.47 HUMAN 1 -7.5903 -5.3823 RTLSDPPSPLPHGPP-p Q9ULH1-2;S846-p RTLSDPPSPLPHGPP 0.782230814615309 0.296899669423631 0.0443333333333333 -0.108 2.04787574779423 6.96151581961001 0.0443333333333333 -0.108 0.624039995747532 0.201302152159882 0.519378555295441 -1.45387560557763 Q9ULH1 ASAP1 Q9ULH1.2.S846.p_ASAP1 Q9ULH1-2_S846s _1_1_846_846 Q9ULH1-2 Q9ULH1-2|A0A0A0MRE5 Isoform 1 of Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16266.16266.3 19.03 19.03 1.984 3 1 1 0 731.3906 2112.1854 S846s TMT10 840 (R) TLSDPPsPLPHGPPNK (G) T(0.0)LS(0.0)DPPS(0.99)PLPHGPPNK K:TMT10,s:Phosphorylated S ASAP1 126865.1 8 6 801.1 222.95 HUMAN 1 2.0479 -6.9615 RTLTRAASLRGGVGA-p Q9ULR3;S211-p RTLTRAASLRGGVGA 0.278257140485788 0.497959826036772 0.167333333333333 -0.084 10.5086929471266 4.05199421808576 0.167333333333333 -0.084 0.0889468772142072 0.393369404379292 2.07024329007416 -0.926896883894918 Q9ULR3 PPM1H Q9ULR3.S211.p_PPM1H Q9ULR3_S211s _1_1_211_211 Q9ULR3 Q9ULR3 Protein phosphatase 1H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9639.9639.2 14.64 9.7 13.452 5 1 1 0 1073.0553 2065.1352 S211s TMT10 209 (R) AAsLRGGVGAPGSPSTPPTR (F) AAS(0.99)LRGGVGAPGS(0.0)PS(0.0)T(0.0)PPT(0.0)R s:Phosphorylated S PPM1H 56960.5 8 5 820.1 218.82 HUMAN 1 10.5087 -4.052 RTNKLPGSPGLSKSM-p Q8N9U0;S168-p RTNKLPGSPGLSKSM 0.251274204758535 0.0619237436116897 -0.170666666666667 -0.32 11.4465792862861 16.0824925249449 -0.170666666666667 -0.32 0.07167077016556 0.0246462442148153 -2.23453978222389 -3.08185421474435 Q8N9U0 TC2N Q8N9U0.S168.p_TC2N Q8N9U0_S168s _1_1_168_168 Q8N9U0 Q8N9U0|Q8N9U0-2 Tandem C2 domains nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13726.13726.3 14.25 14.25 3.808 3 1 1 0 656.0491 1886.1678 S168s TMT10 162 (R) TNKLPGsPGLSK (S) T(0.0)NKLPGS(0.99)PGLS(0.0)K K:TMT10,s:Phosphorylated S TC2N 55796.6 11 4 1080.1 179.95 HUMAN 1 -11.4466 -16.0825 RTNSAEVTPPVLSVM-p A0A1C7CYX1;T704-p RTNSAEVTPPVLSVM 0.23797684518109 0.0322234319972865 0.189333333333333 0.272666666666667 11.927323205937 20.1324543869016 0.189333333333333 0.272666666666667 0.0641604910884629 0.00969961644830719 2.31945036166419 3.9037505188491 A0A1C7CYX1 NotFound A0A1C7CYX1.T704.p_NotFound A0A1C7CYX1_T704t _1_1_704_704 A0A1C7CYX1 A0A1C7CYX1|Q6PJG2 ELM2 and SANT domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30609.30815.3 22.08 22.08 3.501 6 1 1 0 964.1547 2810.4807 T704t TMT10 698 (R) TNSAEVtPPVLSVMGEATPVSIEPR (I) T(0.0)NS(0.0)AEVT(0.99)PPVLS(0.0)VMGEAT(0.0)PVS(0.0)IEPR t:Phosphorylated T ELMSAN1 121244.8 11 7 548.1 275.48 HUMAN 1 11.9273 20.1325 RTNSFSLSPLHSNTK-p Q9UBZ9;S301-p RTNSFSLSPLHSNTK 0.936107507392066 0.00455061128120994 -0.0123333333333333 -0.841333333333333 0.562727328244532 34.3381996840128 -0.0123333333333333 -0.841333333333333 0.878470672304128 0.000368281608753139 -0.160284424700518 -7.85373212563466 Q9UBZ9 REV1 Q9UBZ9.S301.p_REV1 Q9UBZ9_S301s _1_1_301_301 Q9UBZ9 Q9UBZ9|Q9UBZ9-2|Q9UBZ9-3 DNA repair protein REV1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17275.17275.3 15.03 15.03 2.636 6 1 1 0 691.0253 1991.0962 S301s TMT10 295 (R) TNSFSLsPLHSNTK (I) T(0.0)NS(0.0)FS(0.0)LS(0.99)PLHS(0.0)NT(0.0)K K:TMT10,s:Phosphorylated S REV1 139443.7 1 2 1665.1 122.52 HUMAN 1 -0.5627 -34.3382 RTPAAPASPAAVPSE-p P07199;S156-p RTPAAPASPAAVPSE 0.796289087702069 0.241741680312526 -0.04 -0.123 1.91157224912852 8.12210448555789 -0.04 -0.123 0.643936103155809 0.154095356333886 -0.489128791297064 -1.65580277301896 P07199 CENPB P07199.S156.p_CENPB P07199_S156s _1_1_156_156 P07199 P07199 Major centromere autoantigen B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14721.14721.3 19.61 19.61 6.428 7 1 1 0 841.0697 2441.2258 S156s TMT10 150 (R) TPAAPAsPAAVPSEGSGGSTTGWR (A) T(0.0)PAAPAS(0.99)PAAVPS(0.0)EGS(0.0)GGS(0.0)T(0.0)T(0.0)GWR s:Phosphorylated S CENPB 65569.5 5 2 5026.1 23.75 HUMAN 1 -1.9116 -8.1221 RTPATKRSFSKEVEE-p Q04637-9;S1192-p RTPATKRSFSKEVEE 0.120014369208718 0.0126231003819755 0.887333333333333 -1.14566666666667 19.1505748146465 26.4726943344563 0.887333333333333 -1.14566666666667 0.0121602504182848 0.00225284113066839 3.69897931898114 -5.41940867079984 Q04637 EIF4G1 Q04637.9.S1192.p_EIF4G1 Q04637-9_S1192s _1_1_1192_1192 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1|Q04637-4|E7EX73|Q04637-5|Q04637-7|Q04637-6 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8089.8089.4 8.26 8.26 8.258 4 1 1 0 473.2762 1810.1154 S1192s TMT10 1186 (R) TPATKRsFSK (E) T(0.0)PAT(0.0)KRS(0.99)FS(0.0)K K:TMT10,s:Phosphorylated S EIF4G1 176975.4 5 25 107.1 585.61 HUMAN 1 19.1506 -26.4727 RTPDGFDSVPLKTSS-p Q6UXG2;S999-p RTPDGFDSVPLKTSS 0.210044301362565 0.0326501501708347 -0.21 0.311333333333333 13.0758509159764 20.0537584545233 -0.21 0.311333333333333 0.0492509836126021 0.00987697954936939 -2.52474387852638 3.88684745067828 Q6UXG2 KIAA1324 Q6UXG2.S999.p_KIAA1324 Q6UXG2_S999s _1_1_999_999 Q6UXG2 Q6UXG2|Q6UXG2-3 UPF0577 protein KIAA1324 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16561.16561.3 11.13 11.13 4.765 2 1 1 0 624.0016 1790.0213 S999s TMT10 992 (K) RTPDGFDsVPLK (T) RT(0.0)PDGFDS(0.99)VPLK K:TMT10,s:Phosphorylated S KIAA1324 114517.5 1 2 3926.2 40.58 HUMAN 1 -13.0759 20.0538 RTPHTPGTPKSAILV-p P11137;T1631-p RTPHTPGTPKSAILV 0.206669838771857 0.120732779557619 0.194 -0.177 13.2409617597278 12.1055317002151 0.194 -0.177 0.0474136974406505 0.0615810131789989 2.55457896841102 -2.34988239692884 P11137 MAP2 P11137.T1631.p_MAP2 P11137_T1631t _1_1_1631_1631 P11137 P11137|P11137-3|P11137-4|P11137-2 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5363.5363.2 11.1 6.26 3.109 3 1 1 0 737.3974 1393.8204 T1631t TMT10 1625 (R) TPHTPGtPK (S) T(0.0)PHT(0.0)PGT(0.99)PK K:TMT10,t:Phosphorylated T MAP2 199979.2 1 16 117.1 560.28 HUMAN 1 13.241 -12.1055 RTPMAGVSPKKAHPC-p Q9H707;S86-p RTPMAGVSPKKAHPC 0.952809813911717 0.00795843639894566 -0.00966666666666667 -0.477 0.413796388765987 29.9404461792158 -0.00966666666666667 -0.477 0.90911821874982 0.00101380722531827 -0.11959572791265 -6.40390056106149 Q9H707 ZNF552 Q9H707.S86.p_ZNF552 Q9H707_S86s _1_1_86_86 Q9H707 B7Z6K7|A0A087WWD1|Q9H707 Zinc finger protein 552 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13221.13221.2 11.86 9.28 5.585 2 1 1 0 713.3817 1345.7914 S86s TMT10 80 (R) TPMAGVsPK (K) T(0.0)PMAGVS(0.99)PK K:TMT10,s:Phosphorylated S ZNF552 47452.6 15 4 3243.1 56.13 HUMAN 1 -0.4138 -29.9404 RTPPLQQSPSVIRRL-p Q6IQ26;S1085-p RTPPLQQSPSVIRRL 0.584672854353861 0.126502339261226 0.0903333333333333 0.179666666666667 4.2902184052003 11.8381676057001 0.0903333333333333 0.179666666666667 0.372372979274712 0.0654912439306526 0.972214312038475 2.30253185014376 Q6IQ26 DENND5A Q6IQ26.S1085.p_DENND5A Q6IQ26_S1085s _1_1_1085_1085 Q6IQ26 Q6IQ26|Q6IQ26-2 DENN domain-containing protein 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14541.14541.3 9.1 9.1 3.75 3 1 1 0 544.6291 1551.9056 S1085s TMT10 1079 (R) TPPLQQsPSVIR (R) T(0.0)PPLQQS(0.99)PS(0.0)VIR s:Phosphorylated S DENND5A 148633.4 4 4 2138.1 96.07 HUMAN 1 4.2902 11.8382 RTPPSPGSPLPFLLL-p Q7L099-2;S97-p RTPPSPGSPLPFLLL 0.688872970307857 0.40467672946711 0.0673333333333333 0.104333333333333 3.03726924899505 5.22841639291364 0.0673333333333333 0.104333333333333 0.496904666290226 0.300025633004144 0.727971989598989 1.14551605839018 Q7L099 RUFY3 Q7L099.2.S97.p_RUFY3 Q7L099-2_S97s _1_1_97_97 Q7L099-2 Q7L099-2 Isoform 2 of Protein RUFY3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.34653.34653.4 20.18 20.18 1.63 9 1 1 0 785.6592 3059.6454 S97s TMT10 91 (R) TPPSPGsPLPFLLLSYPSGGGGSSGSGK (H) T(0.0)PPS(0.0)PGS(0.99)PLPFLLLS(0.0)Y(0.0)PS(0.0)GGGGS(0.0)S(0.0)GS(0.0)GK K:TMT10,s:Phosphorylated S RUFY3 56101.9 4 1 5351.1 20.18 HUMAN 1 3.0373 5.2284 RTPQAPASANLVGPR-p Q9UQ35;S2335-p RTPQAPASANLVGPR 0.792766940905892 0.0257729799287224 0.0443333333333333 0.931333333333333 1.9455960750589 21.6061776272088 0.0443333333333333 0.931333333333333 0.638911039924489 0.00690847574684345 0.496719907335427 4.22808029027831 Q9UQ35 SRRM2 Q9UQ35.S2335.p_SRRM2 Q9UQ35_S2335s _1_1_2335_2335 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12783.12783.2 11.57 8.29 3.249 2 1 1 0 844.44 1607.9067 S2335s TMT10 2329 (R) TPQAPAsANLVGPR (S) T(0.0)PQAPAS(0.99)ANLVGPR s:Phosphorylated S SRRM2 300351.7 1 149 2.1 3310.34 HUMAN 1 1.9456 21.6062 RTPRAGVSPKKAHPC-p Q8TAU3;S87-p RTPRAGVSPKKAHPC 0.11965989897032 0.014808098748328 0.286333333333333 -0.515333333333333 19.1866714468869 25.3307776912319 0.286333333333333 -0.515333333333333 0.0120595986728577 0.00293036845711558 3.70653448355323 -5.12154054208655 Q8TAU3 ZNF417 Q8TAU3.S87.p_ZNF417 Q8TAU3_S87s _1_1_87_87 Q8TAU3 Q8TAU3|Q96SQ5|M0R230|Q96SQ5-2|E7EP41 Zinc finger protein 417 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7522.7522.3 8.22 3.22 99 1 1 1 0 485.2964 1373.9083 S87s TMT10 84 (R) AGVsPKK (A) AGVS(1.0)PKK K:TMT10,s:Phosphorylated S ZNF417 67843 2 1 7003.1 8.22 HUMAN 1 19.1867 -25.3308 RTPRIQNSPQKKDSG-p X6R7X0;S44-p RTPRIQNSPQKKDSG 0.0391574900042898 0.00582209922016007 0.596333333333333 -0.598666666666667 31.8918683523616 32.3058631867543 0.596333333333334 -0.598666666666667 0.000646864272264086 0.000588049224159495 7.02902814168516 -7.15304347618652 X6R7X0 NotFound X6R7X0.S44.p_NotFound X6R7X0_S44s _1_1_44_44 X6R7X0 X6R7X0|Q96MN5 Transcription elongation factor A N-terminal and central domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7352.7352.3 8.77 8.77 99 1 1 1 0 570.6689 1630.0255 S44s TMT10 41 (R) IQNsPQKK (D) IQNS(1.0)PQKK K:TMT10,s:Phosphorylated S TCEANC2 27426.2 2 2 4787.1 26.64 HUMAN 1 31.8919 -32.3059 RTPRTPASQDRILQE-p Q99459;S358-p RTPRTPASQDRILQE 0.895863012427936 0.0126229462168664 0.022 -0.408666666666667 0.934917896770729 26.47624139355 0.022 -0.408666666666667 0.806321444691089 0.00225100189517969 0.257472637942076 -5.42035303061067 Q99459 CDC5L Q99459.S358.p_CDC5L Q99459_S358s_1_1_358_358 Q99459 Q99459 Cell division cycle 5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.35983.35983.4 17.29 17.29 1.204 4 1 1 0 852.454 3325.819 S358s N374n TMT10 355 (R) TPAsQDRILQEAQNLMALTnVDTPLK (G) T(0.0)PAS(0.99)QDRILQEAQN(0.0)LMALT(0.0)N(0.99)VDT(0.0)PLK K:TMT10,s:Phosphorylated S,n:Deamidated CDC5L 92477.2 2 6 751.1 232.35 HUMAN 1 0.9349 -26.4762 RTPRTPRTPQLKDSS-p Q6PKG0;T788-p RTPRTPRTPQLKDSS 0.0807170651382237 0.0110382865087685 -0.348666666666667 -0.579666666666667 23.3401834168279 27.414691428874 -0.348666666666667 -0.579666666666667 0.00463427347263577 0.00181355552645817 -4.63531017326166 -5.67451667423482 Q6PKG0 LARP1 Q6PKG0.T788.p_LARP1 Q6PKG0_T788t _1_1_788_788 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8165.8165.3 10.43 8.51 2.524 2 1 1 0 493.621 1398.8833 T788t TMT10 785 (R) TPRtPQLK (D) T(0.0)PRT(0.99)PQLK K:TMT10,t:Phosphorylated T LARP1 123907.4 10 57 28.1 931.95 HUMAN 1 -23.3402 -27.4147 RTPSLHDSDNDELSC-p Q9H2F5;S539-p RTPSLHDSDNDELSC 0.487530750090205 0.00663831508918505 -0.100666666666667 0.503333333333333 5.75019607187091 31.2924857058248 -0.100666666666667 0.503333333333333 0.266060493817953 0.000742593988918782 -1.23993239128629 6.82377521082652 Q9H2F5 EPC1 Q9H2F5.S539.p_EPC1 Q9H2F5_S539s _1_1_539_539 Q9H2F5 Q9H2F5|Q9H2F5-2|Q9H2F5-3 Enhancer of polycomb homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9059.9059.4 19.04 19.04 4.469 4 1 1 0 603.788 2332.1603 S539s TMT10 533 (R) TPSLHDsDNDELSCRK (L) T(0.0)PS(0.0)LHDS(0.99)DNDELS(0.0)CRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EPC1 94032.2 1 4 2237.1 92.28 HUMAN 1 -5.7502 31.2925 RTPSRERSSSASSPE-p Q9UQ35;S1419-p RTPSRERSSSASSPE 0.110631198359183 0.0746300329356068 -0.375 0.474666666666667 20.0108163192104 14.9582894947385 -0.375 0.474666666666667 0.00997512549307854 0.0319279511664255 -3.88127205019103 2.86876637981669 Q9UQ35 SRRM2 Q9UQ35.S1419.p_SRRM2 Q9UQ35_S1419s _1_1_1419_1419 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5744.5744.3 12.77 12.77 1.129 5 1 1 0 611.9657 1753.9155 S1419s TMT10 1417 (R) ERsSSASSPEMK (D) ERS(0.99)S(0.0)S(0.0)AS(0.0)S(0.0)PEMK K:TMT10,s:Phosphorylated S SRRM2 300351.7 2 83 2.1 3310.34 HUMAN 1 -20.0108 14.9583 RTPSRGRSECDSSPE-p Q9UQ35;S1478-p RTPSRGRSECDSSPE 0.59150473958965 0.265578874827687 0.0886666666666667 0.211333333333333 4.20100014999953 7.58242561843307 0.0886666666666667 0.211333333333333 0.380101851426555 0.174484734982924 0.955361207123213 1.56215864164345 Q9UQ35 SRRM2 Q9UQ35.S1478.p_SRRM2 Q9UQ35_S1478sS1482sS1483s_3_3_1478_1483 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4092.4092.2 8.44 8.44 99 3 3 3 0 909.3232 1577.7427 S1478s S1482s S1483s Hydrogen 1476 (R) GRsECDssPEPK (A) GRS(1.0)ECDS(1.0)S(1.0)PEPK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 4 268 2.1 3310.34 HUMAN 1 4.201 7.5824 RTPSSGMSSTMKESA-p Q5T4S7-2;S1737-p RTPSSGMSSTMKESA 0.84768925371821 0.130628168200247 -0.0316666666666667 0.184666666666667 1.39019431229643 11.6493050327796 -0.0316666666666667 0.184666666666667 0.726073470685815 0.0684021097027466 -0.36908055868958 2.26918754570991 Q5T4S7 UBR4 Q5T4S7.2.S1737.p_UBR4 Q5T4S7-2_S1737s _1_1_1737_1737 Q5T4S7-2 Q5T4S7-2|Q5T4S7-4 Isoform 2 of E3 ubiquitin-protein ligase UBR4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8098.8098.3 9.34 9.34 1.18 6 1 1 0 603.3002 1727.9184 S1737s TMT10 1730 (K) RTPSSGMsSTMK (E) RT(0.0)PS(0.0)S(0.0)GMS(0.99)S(0.0)T(0.0)MK K:TMT10,s:Phosphorylated S UBR4 583136.9 1 8 528.1 281.83 HUMAN 1 -1.3902 11.6493 RTPSVAKSPEAKSPL-p Q9UI08-2;S351-p RTPSVAKSPEAKSPL 0.303775166198443 0.00298089814036961 -0.173666666666667 -0.754 9.69483446003196 38.0207551621345 -0.173666666666667 -0.754 0.107279453875091 0.000157733697454437 -1.9287381075737 -9.27579225625114 Q9UI08 EVL Q9UI08.2.S351.p_EVL Q9UI08-2_S351s _1_1_351_351 Q9UI08-2 Q9UI08-2|Q9UI08-3|Q9UI08-4 Isoform 1 of Ena/VASP-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9309.9309.3 10.13 6.09 1.586 3 1 1 0 628.0282 1802.0991 S351s TMT10 345 (R) TPSVAKsPEAK (S) T(0.0)PS(0.0)VAKS(0.99)PEAK K:TMT10,s:Phosphorylated S EVL 44905.3 2 6 2000.1 103.33 HUMAN 1 -9.6948 -38.0208 RTPVKLESIDGNEEE-p Q8TEQ6;S757-p RTPVKLESIDGNEEE 0.0658837618616825 0.0337362506468539 -0.612666666666667 0.272333333333333 25.4908635925105 19.8422957944758 -0.612666666666667 0.272333333333333 0.0028243183047228 0.0103698009604088 -5.1691814013739 3.84162815536901 Q8TEQ6 GEMIN5 Q8TEQ6.S757.p_GEMIN5 Q8TEQ6_S757s _1_1_757_757 Q8TEQ6 Q8TEQ6 Gem-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18015.18015.4 16.03 16.03 5.173 3 1 1 0 669.0983 2593.3998 S757s TMT10 751 (R) TPVKLEsIDGNEEESMK (E) T(0.0)PVKLES(0.99)IDGNEEES(0.0)MK K:TMT10,s:Phosphorylated S GEMIN5 170925.5 7 4 798.1 223.37 HUMAN 1 -25.4909 19.8423 RTQAQVNSPIVTENK-p A7KAX9;S613-p RTQAQVNSPIVTENK 0.389389394272965 0.0165602452122879 -0.140333333333333 -0.348666666666667 7.57874226364804 24.5966945930696 -0.140333333333333 -0.348666666666667 0.17463278240866 0.00347000851653708 -1.56198603898141 -4.93631980943359 A7KAX9 ARHGAP32 A7KAX9.S613.p_ARHGAP32 A7KAX9_S613s _1_1_613_613 A7KAX9 A7KAX9|A7KAX9-2|G3V174 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23048.23048.4 20.66 20.66 1.124 4 1 1 0 928.0001 3629.0153 S613s TMT10 607 (R) TQAQVNsPIVTENKYIEVGEGPAALQGK (F) T(0.0)QAQVNS(0.99)PIVT(0.0)ENKY(0.0)IEVGEGPAALQGK K:TMT10,s:Phosphorylated S ARHGAP32 232236.5 3 5 159.1 497.4 HUMAN 1 -7.5787 -24.5967 RTRGRKRSFVPEEEK-p A0A0U1RRH6;S835-p RTRGRKRSFVPEEEK 0.191102046396083 0.676048027995285 -0.207333333333333 0.0533333333333333 14.0368217208387 2.32236278044915 -0.207333333333333 0.0533333333333334 0.0394746081769875 0.585819362597429 -2.69968152751938 0.578993197827217 A0A0U1RRH6 NotFound A0A0U1RRH6.S835.p_NotFound A0A0U1RRH6_S835s _1_1_835_835 A0A0U1RRH6 A0A0U1RRH6|O94880|O94880-2 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7606.7606.4 17.05 11.65 99 1 1 1 0 545.0202 2097.0926 S835s Hydrogen 835 (R) sFVPEEEKHEERVPR (E) S(1.0)FVPEEEKHEERVPR K:TMT10-Lys-Only,s:Phosphorylated S PHF14 109152.4 3 17 126.1 543.2 HUMAN 1 -14.0368 2.3224 RTRILAPSPDSLLHT-p Q99758;S1372-p RTRILAPSPDSLLHT 0.220879983269058 0.256538183577856 0.232333333333333 0.122666666666667 12.6261174290438 7.78152958303443 0.232333333333333 0.122666666666667 0.0546245984047872 0.16666601122951 2.44390846999092 1.59674586496781 Q99758 ABCA3 Q99758.S1372.p_ABCA3 Q99758_S1372s _1_1_1372_1372 Q99758 Q99758|H0Y3H2 ATP-binding cassette sub-family A member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.34714.34714.3 18.41 18.41 1.299 3 1 1 0 789.465 2286.4201 S1372s TMT10 1368 (R) ILAPsPDSLLHTPLIIK (E) ILAPS(0.99)PDS(0.0)LLHT(0.0)PLIIK K:TMT10,s:Phosphorylated S ABCA3 192956.2 1 12 1112.1 175.87 HUMAN 1 12.6261 7.7815 RTRKSRVSVSPGRTS-p A9Z1X7;S424-p RTRKSRVSVSPGRTS 0.876974320191993 0.470271380686201 0.0243333333333333 0.107666666666667 1.11979619901925 4.36731375380175 0.0243333333333333 0.107666666666667 0.772716845458782 0.365820993290876 0.303663861243559 0.986543881654608 A9Z1X7 NotFound A9Z1X7.S424.p_NotFound A9Z1X7_S424sS426s_2_2_424_426 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6352.6352.2 7.75 7.75 7.747 4 2 2 0 732.3484 1303.7531 S424s S426s Hydrogen 423 (R) VsVsPGRTSGK (V) VS(0.99)VS(0.99)PGRT(0.0)S(0.0)GK K:TMT10-Lys-Only,s:Phosphorylated S SRRM1 103445.7 15 57 8.1 1346.57 HUMAN 1 1.1198 4.3673 RTRMQNDSILKSELG-p Q5JTV8;S305-p RTRMQNDSILKSELG 0.260407038253762 0.0294709095436178 -0.312333333333333 -0.309 11.0747040262978 20.716127827734 -0.312333333333333 -0.309 0.078078164895603 0.00847983139475523 -2.16920204070236 -4.03040763346834 Q5JTV8 TOR1AIP1 Q5JTV8.S305.p_TOR1AIP1 Q5JTV8_S305s _1_1_305_305 Q5JTV8 Q5JTV8-3|A0A0A0MSK5 Torsin-1A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15920.16216.2 7.4 7.4 99 1 1 1 0 743.8902 1406.8078 S305s TMT10 301 (R) MQNDsILK (S) MQNDS(1.0)ILK K:TMT10,s:Phosphorylated S TOR1AIP1 66418.4 2 16 585.1 265.22 HUMAN 1 -11.0747 -20.7161 RTRSRSRSRSPLSPR-p Q9NXX6;S30-p RTRSRSRSRSPLSPR 0.0318453853028823 0.00804251812163316 0.599333333333333 0.603666666666667 35.0483140449566 29.8426254392642 0.599333333333333 0.603666666666667 0.000312729316389823 0.00103690138859104 8.12780226976884 6.37435051234676 Q9NXX6 NSMCE4A Q9NXX6.S30.p_NSMCE4A Q9NXX6_S30s _1_1_30_30 Q9NXX6 Q9NXX6|Q9NXX6-2 Non-structural maintenance of chromosomes element 4 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4119.4119.3 7.17 2.46 1.211 3 1 1 0 403.55 1128.6687 S30s TMT10 30 (R) sRSPLSPR (S) S(0.99)RS(0.0)PLS(0.0)PR s:Phosphorylated S NSMCE4A 44414.7 1 1 3661.1 45.81 HUMAN 1 35.0483 29.8426 RTRVLKISEEDELDT-p Q15121-2;S111-p RTRVLKISEEDELDT 0.319825102614354 0.104706221180298 0.253666666666667 -0.213333333333333 9.26886746557367 12.9492217679433 0.253666666666667 -0.213333333333333 0.118335010443091 0.0507081566388582 1.85491562584374 -2.50055541759221 Q15121 PEA15 Q15121.2.S111.p_PEA15 Q15121-2_S111s _1_1_111_111 Q15121-2 Q15121-2 Isoform 2 of Astrocytic phosphoprotein PEA-15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20027.20027.3 13.8 13.8 5.714 2 1 1 0 762.7527 2206.2785 S111s TMT10 107 (R) VLKIsEEDELDTK (L) VLKIS(0.99)EEDELDT(0.0)K K:TMT10,s:Phosphorylated S PEA15 17420.4 2 2 1203.1 166.92 HUMAN 1 9.2689 -12.9492 RTSFSGRSVELCCAS-p J3KQR7;S1200-p RTSFSGRSVELCCAS 0.689199622098369 0.323603568597262 -0.059 -0.180333333333333 3.03427194771553 6.47901913865423 -0.059 -0.180333333333333 0.497247725463405 0.224956261594268 -0.727364761535474 -1.3691228068017 J3KQR7 NotFound J3KQR7.S1200.p_NotFound J3KQR7_S1200s _1_1_1200_1200 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11293.11293.3 14.5 8.02 2.246 5 1 1 0 675.9744 1945.9421 S1200s TMT10 1194 (R) TSFSGRsVELCCASR (K) T(0.0)S(0.0)FS(0.0)GRS(0.99)VELCCAS(0.0)R C:Carbamidomethylation,s:Phosphorylated S CEP170B 172326.6 3 29 51.1 746.11 HUMAN 1 -3.0343 -6.479 RTSFSVGSDDELGPI-p Q9NRY4;S1179-p RTSFSVGSDDELGPI 0.336003398897719 0.190013173716585 -0.247 0.138 8.83309615257846 9.48377136028512 -0.247 0.138 0.130824891955974 0.112621903654476 -1.7794714692509 1.89142493578628 Q9NRY4 ARHGAP35 Q9NRY4.S1179.p_ARHGAP35 Q9NRY4_S1179s _1_1_1179_1179 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21773.21773.2 18.17 18.17 2.47 4 1 1 0 944.9475 1808.9228 S1179s TMT10 1173 (R) TSFSVGsDDELGPIR (K) T(0.0)S(0.0)FS(0.0)VGS(0.99)DDELGPIR s:Phosphorylated S ARHGAP35 172051.4 12 13 247.1 410.47 HUMAN 1 -8.8331 9.4838 RTSIPVHSKQAEKIS-p Q96QT4;S1493-p RTSIPVHSKQAEKIS 0.306684187031916 0.109354597119407 0.212333333333333 0.186 9.60836182137887 12.6961198299556 0.212333333333333 0.186 0.109436908944548 0.0537511817627581 1.91374235379801 2.45514125240884 Q96QT4 TRPM7 Q96QT4.S1493.p_TRPM7 Q96QT4_S1493s _1_1_1493_1493 Q96QT4 Q96QT4|H0YLN8 Transient receptor potential cation channel subfamily M member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8410.8410.2 9.47 3.83 9.471 3 1 1 0 703.896 1326.8146 S1493s TMT10 1487 (R) TSIPVHsK (Q) T(0.0)S(0.0)IPVHS(0.99)K K:TMT10,s:Phosphorylated S TRPM7 214804.2 1 11 965.1 193.95 HUMAN 1 9.6084 12.6961 RTSPRPASPARSGSP-p O15047;S464-p RTSPRPASPARSGSP 0.608256782187761 0.492914919569268 -0.095 0.0946666666666667 3.99698227198709 4.10652554644568 -0.095 0.0946666666666667 0.398383894458862 0.388461019263524 -0.916552727669094 0.937276184939383 O15047 SETD1A O15047.S464.p_SETD1A O15047_S464s _1_1_464_464 O15047 O15047 Histone-lysine N-methyltransferase SETD1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3447.3447.3 8.35 8.35 2.02 3 1 1 0 450.2361 1268.7272 S464s TMT10 458 (R) TSPRPAsPAR (S) T(0.0)S(0.0)PRPAS(0.99)PAR s:Phosphorylated S SETD1A 186829.5 2 3 570.2 269.37 HUMAN 1 -3.997 4.1065 RTSSKESSPIPSPTS-p A0A087WUZ3;S2167-p RTSSKESSPIPSPTS 0.760470283235028 0.100371309693376 0.0473333333333333 0.215 2.28098366074573 13.1929772470357 0.0473333333333333 0.215 0.591427662852142 0.0479404686566598 0.570166354072099 2.54447833063867 A0A087WUZ3 NotFound A0A087WUZ3.S2167.p_NotFound A0A087WUZ3_S2167sS2171s_2_2_2167_2171 A0A087WUZ3 A0A087WUZ3|Q01082 Spectrin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10403.10403.2 9 9 1.153 5 2 2 0 1009.9866 1859.0275 S2167s S2171s TMT10 2165 (K) ESsPIPsPTSDRK (A) ES(0.0)S(0.99)PIPS(0.99)PT(0.0)S(0.0)DRK K:TMT10,s:Phosphorylated S SPTBN1 275623.3 10 23 233.1 420.49 HUMAN 1 2.281 13.193 RTSSKRVSRSLDGAP-p O43491;S548-p RTSSKRVSRSLDGAP 0.0768338580443976 0.13528915323875 -0.352666666666667 -0.182666666666667 23.8537722098202 11.4512219959005 -0.352666666666667 -0.182666666666667 0.00411739733434798 0.0715941933740043 -4.7592083814868 -2.23430193185238 O43491 EPB41L2 O43491.S548.p_EPB41L2 O43491_S548sS550s_2_2_548_550 O43491 O43491|E9PHY5|O43491-4|E9PK52 Band 4.1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23736.23736.4 12.24 8.23 6.731 3 2 2 0 695.3546 2618.4522 S548s S550s TMT10 546 (K) RVsRsLDGAPIGVMDQSLMK (D) RVS(0.99)RS(0.99)LDGAPIGVMDQS(0.0)LMK K:TMT10,s:Phosphorylated S EPB41L2 113099.5 2 18 469.1 302.69 HUMAN 1 -23.8538 -11.4512 RTSTPFGSGRVREKR-p Q8TAP9;S124-p RTSTPFGSGRVREKR 0.991883667014353 0.0504606065948183 -0.00233333333333334 -0.284 0.0744332376826459 17.3275802923862 -0.00233333333333334 -0.284 0.983007148877606 0.0185029924136229 -0.0223009554327263 -3.32484086639111 Q8TAP9 MPLKIP Q8TAP9.S124.p_MPLKIP Q8TAP9_S124s _1_1_124_124 Q8TAP9 Q8TAP9 M-phase-specific PLK1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8823.8823.3 8.31 3.79 2 4 1 1 0 491.9191 1393.7749 S124s TMT10 118 (R) TSTPFGsGRVR (E) T(0.0)S(0.0)T(0.0)PFGS(0.99)GRVR s:Phosphorylated S MPLKIP 19203.6 1 6 1651.1 123.4 HUMAN 1 -0.0744 -17.3276 RTSWPPATARSTESF-p Q12774;T902-p RTSWPPATARSTESF 0.294305276064614 0.549574727690917 -0.147666666666667 -0.0753333333333333 10.0233077036626 3.49873297427026 -0.147666666666667 -0.0753333333333333 0.0994647578426666 0.446813928177192 -1.98576009792769 -0.819884807572134 Q12774 ARHGEF5 Q12774.T902.p_ARHGEF5 Q12774_T902t _1_1_902_902 Q12774 Q12774 Rho guanine nucleotide exchange factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9703.9703.2 7.61 2.41 3.506 3 1 1 0 648.3219 1215.6683 T902t TMT10 896 (R) TSWPPAtAR (S) T(0.0)S(0.0)WPPAT(0.99)AR t:Phosphorylated T ARHGEF5 177994.4 1 16 487.1 295.28 HUMAN 1 -10.0233 -3.4987 RTTDEELSELEDRVA-p Q9BV36;S463-p RTTDEELSELEDRVA 0.77329629731901 0.141688317329408 0.0643333333333333 0.402333333333333 2.1348471393649 11.1834087263926 0.0643333333333333 0.402333333333333 0.611667331713426 0.0761481097836771 0.538462060235643 2.18726748696758 Q9BV36 MLPH Q9BV36.S463.p_MLPH Q9BV36_S463s _1_1_463_463 Q9BV36 Q9BV36|Q9BV36-2 Melanophilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37183.37183.4 25.06 25.06 1.21 8 1 1 0 990.965 3880.8621 S463s TMT10 457 (R) TTDEELsELEDRVAVTASEVQQAESEVSDIESR (I) T(0.0)T(0.0)DEELS(0.99)ELEDRVAVT(0.0)AS(0.0)EVQQAES(0.0)EVS(0.0)DIES(0.0)R s:Phosphorylated S MLPH 66632.6 1 6 496.1 293.1 HUMAN 1 2.1348 11.1834 RTTNNEKSPIIKPLI-p O75717;S958-p RTTNNEKSPIIKPLI 0.207422631751664 0.00538864127968498 -0.466 -0.656666666666667 13.1909264841593 32.935946405071 -0.466 -0.656666666666667 0.0479631117602418 0.000508633967161032 -2.54552845342054 -7.36437002171804 O75717 WDHD1 O75717.S958.p_WDHD1 O75717_S958s _1_1_958_958 O75717 O75717|O75717-2 WD repeat and HMG-box DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11291.11291.3 9.58 3.12 2.441 3 1 1 0 671.3848 1932.1733 S958s TMT10 952 (R) TTNNEKsPIIK (P) T(0.0)T(0.0)NNEKS(0.99)PIIK K:TMT10,s:Phosphorylated S WDHD1 127448.5 5 10 554.1 273.24 HUMAN 1 -13.1909 -32.9359 RTTSLGDSLNAHSAA-p Q13796;S851-p RTTSLGDSLNAHSAA 0.338169094611732 0.31585031847978 -0.146333333333333 -0.108666666666667 8.76546010882665 6.61245274170203 -0.146333333333333 -0.108666666666667 0.132878277314355 0.218149753118792 -1.76776375606553 -1.39262594275857 Q13796 SHROOM2 Q13796.S851.p_SHROOM2 Q13796_S851s _1_1_851_851 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10966.10966.3 14.56 14.56 2.229 5 1 1 0 714.028 2060.1024 S851s TMT10 845 (R) TTSLGDsLNAHSAAEK (A) T(0.0)T(0.0)S(0.0)LGDS(0.99)LNAHS(0.0)AAEK K:TMT10,s:Phosphorylated S SHROOM2 177605.1 2 14 90.1 622.62 HUMAN 1 -8.7655 -6.6125 RTTVCALSEADLIEF-p Q7L0X0;S775-p RTTVCALSEADLIEF 0.244161971200343 0.464435838107312 0.171 0.089 11.7117723460157 4.44226986734471 0.171 0.089 0.0674252810488057 0.359561359037427 2.28131292609663 1.00059722426244 Q7L0X0 TRIL Q7L0X0.S775.p_TRIL Q7L0X0_S775s _1_1_775_775 Q7L0X0 Q7L0X0 TLR4 interactor with leucine rich repeats HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28189.28189.3 17.63 17.63 5.668 3 1 1 0 802.7036 2326.1257 S775s TMT10 769 (R) TTVCALsEADLIEFPCDR (F) T(0.0)T(0.0)VCALS(0.99)EADLIEFPCDR C:Carbamidomethylation,s:Phosphorylated S TRIL 89691 2 2 3227.1 56.63 HUMAN 1 11.7118 4.4423 RTVGRRNTFIGTPYW-p A0A0D9SEY1;T187-p RTVGRRNTFIGTPYW 0.976894053422127 0.183041802556552 0.00533333333333332 0.19 0.2002245719192 9.70200092758656 0.00533333333333332 0.19 0.954943205018002 0.107102573721134 0.0591663715591663 1.92922703970754 A0A0D9SEY1 NotFound A0A0D9SEY1.T187.p_NotFound A0A0D9SEY1_T187t _1_1_187_187 A0A0D9SEY1 Q8N4C8|O95819-3|A0A0D9SEY1|Q8N4C8-4|Q8N4C8-3|Q8N4C8-2 Mitogen-activated protein kinase kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28958.28958.3 18 18 1.789 6 1 1 0 1182.5103 3465.5515 T187t Hydrogen 185 (R) RNtFIGTPYWMAPEVIACDENPDATYDYR (S) RNT(0.99)FIGT(0.0)PY(0.0)WMAPEVIACDENPDAT(0.0)Y(0.0)DY(0.0)R C:Carbamidomethylation,t:Phosphorylated T MAP4K4 151879.6 3 1 131.2 535.29 HUMAN 1 0.2002 9.702 RTVIADGSLSHPKEH-p Q8IXS6-2;S260-p RTVIADGSLSHPKEH 0.600746876542819 0.0684984640530155 -0.0946666666666667 -0.238333333333333 4.0882769300172 15.4898120955155 -0.0946666666666667 -0.238333333333333 0.390096727449464 0.0282500220053012 -0.933966637248372 -2.96881524929732 Q8IXS6 PALM2 Q8IXS6.2.S260.p_PALM2 Q8IXS6-2_S260s _1_1_260_260 Q8IXS6-2 B1ALY0|Q8IXS6-2|C9JA33 Isoform 2 of Paralemmin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12331.12331.3 15.92 15.92 1.579 3 1 1 0 588.3207 1682.9841 S260s TMT10 254 (R) TVIADGsLSHPK (E) T(0.0)VIADGS(0.99)LS(0.0)HPK K:TMT10,s:Phosphorylated S PALM2 45722.2 2 2 779.2 226.39 HUMAN 1 -4.0883 -15.4898 RTVIDKCSPPLEFLD-p Q93075;S299-p RTVIDKCSPPLEFLD 0.865330882677542 0.339845618254319 0.0593333333333333 -0.0933333333333333 1.22195713881069 6.20899686089457 0.0593333333333333 -0.0933333333333333 0.754752023626996 0.239386863147555 0.328663353316334 -1.32138579984838 Q93075 TATDN2 Q93075.S299.p_TATDN2 Q93075_S299s _1_1_299_299 Q93075 Q93075 Putative deoxyribonuclease TATDN2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26449.26449.5 21.38 21.38 4.521 4 1 1 0 711.5688 3473.8441 S299s TMT10 293 (R) TVIDKCsPPLEFLDDSDSHLEIQK (H) T(0.0)VIDKCS(0.99)PPLEFLDDS(0.0)DS(0.0)HLEIQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TATDN2 86048.5 1 4 1656.1 123.28 HUMAN 1 1.222 -6.209 RTVIIEQSWGSPKVT-p P10809;S67-p RTVIIEQSWGSPKVT 0.200797395490016 0.139962950234914 0.904666666666667 -0.356 13.5498614825468 11.2542001968045 0.904666666666667 -0.356 0.0441584531388856 0.074916931394559 2.61063715932965 -2.19968606847959 P10809 HSPD1 P10809.S67.p_HSPD1 P10809_S67s _1_1_67_67 P10809 P10809|P10809-2 60 kDa heat shock protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22539.22539.3 12.4 12.65 1.129 3 1 1 0 628.342 1803.0417 S67s TMT10 61 (R) TVIIEQsWGSPK (V) T(0.0)VIIEQS(0.99)WGS(0.0)PK K:TMT10,s:Phosphorylated S HSPD1 61224.7 10 1 1165.1 170.59 HUMAN 1 13.5499 -11.2542 RTVKVTLTPLKMENE-p Q03164-3;T2528-p RTVKVTLTPLKMENE 0.129751256844141 0.000952253650599092 -0.286 -1.48566666666667 18.3588997739365 56.7589048720248 -0.286 -1.48566666666667 0.0145918387786451 2.10915993399827e-06 -3.53526731940316 -20.9959416547148 Q03164 KMT2A Q03164.3.T2528.p_KMT2A Q03164-3_T2528t _1_1_2528_2528 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20148.20148.3 15.32 8.2 2.202 4 1 1 0 824.7839 2392.3725 T2528t TMT10 2525 (K) VTLtPLKMENESQSK (N) VT(0.0)LT(0.99)PLKMENES(0.0)QS(0.0)K K:TMT10,t:Phosphorylated T KMT2A 436608.3 3 29 26.1 936.8 HUMAN 1 -18.3589 -56.7589 RTVNSGGSSEPSPTE-p Q6PIJ6;S736-p RTVNSGGSSEPSPTE 0.492994289859056 0.0264579096715966 0.188666666666667 0.545 5.65714884924336 21.4127632861755 0.188666666666667 0.545 0.271822320141287 0.00722310073018743 1.22323772181357 4.18464591811112 Q6PIJ6 FBXO38 Q6PIJ6.S736.p_FBXO38 Q6PIJ6_S736sS737sS740s_3_3_736_740 Q6PIJ6 Q6PIJ6|Q6PIJ6-2 F-box only protein 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13822.13822.3 10.69 10.69 10.693 7 3 3 0 791.9843 2134.0461 S736s S737s S740s TMT10 730 (R) TVNSGGssEPsPTEVDVSR (Q) T(0.0)VNS(0.0)GGS(0.99)S(0.99)EPS(0.99)PT(0.0)EVDVS(0.0)R s:Phosphorylated S FBXO38 135824.2 1 8 2435.1 83.55 HUMAN 1 5.6571 21.4128 RTVPLYESPRKICYQ-p Q16531;S720-p RTVPLYESPRKICYQ 0.156870667579318 0.0121052262026033 -0.252666666666667 -0.416333333333333 16.141062652183 26.7767843696301 -0.252666666666667 -0.416333333333333 0.0243160895874995 0.00210049456931596 -3.09532284179833 -5.50080976962579 Q16531 DDB1 Q16531.S720.p_DDB1 Q16531_S720s _1_1_720_720 Q16531 Q16531|F5GY55 DNA damage-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13500.13500.3 11.97 7.77 4.955 3 1 1 0 576.6545 1647.9834 S720s TMT10 714 (R) TVPLYEsPRK (I) T(0.0)VPLY(0.0)ES(0.99)PRK K:TMT10,s:Phosphorylated S DDB1 128220.8 1 4 2321.1 87.89 HUMAN 1 -16.1411 -26.7768 RTVQPTQSPYPTQLF-p P32519;S376-p RTVQPTQSPYPTQLF 0.689199622098369 0.235666497597913 0.0686666666666667 -0.139666666666667 3.03396913953041 8.26565690893834 0.0686666666666667 -0.139666666666667 0.49728239685273 0.14908512339198 0.727303407935239 -1.68066486695367 P32519 ELF1 P32519.S376.p_ELF1 P32519_S376s _1_1_376_376 P32519 P32519|P32519-2 ETS-related transcription factor Elf-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21869.21869.3 13.24 13.24 2.241 5 1 1 0 691.3526 1992.0752 S376s TMT10 370 (R) TVQPTQsPYPTQLFR (T) T(0.0)VQPT(0.0)QS(0.99)PY(0.0)PT(0.0)QLFR s:Phosphorylated S ELF1 67725 1 6 1950.1 105.53 HUMAN 1 3.034 -8.2657 RTVSRVESFEDRSRP-p Q6ZNL6;S744-p RTVSRVESFEDRSRP 0.337467872878156 0.14570623251734 -0.162 -0.230666666666667 8.78598795149184 11.0197997710499 -0.162 -0.230666666666667 0.132251682205662 0.0790715082619384 -1.77131712125245 -2.15860326067159 Q6ZNL6 FGD5 Q6ZNL6.S744.p_FGD5 Q6ZNL6_S744s _1_1_744_744 Q6ZNL6 Q6ZNL6|B7ZM68 FYVE, RhoGEF and PH domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9859.9859.3 14.08 9.33 4.405 3 1 1 0 545.2642 1553.8121 S744s TMT10 738 (R) TVSRVEsFEDR (S) T(0.0)VS(0.0)RVES(0.99)FEDR s:Phosphorylated S FGD5 161828 3 9 1305.1 156.12 HUMAN 1 -8.786 -11.0198 RTVTPALSSNVLPRH-p Q9C0E8;S217-p RTVTPALSSNVLPRH 0.147571881565505 0.233323515170399 -0.248 -0.146 16.8710010642049 8.3233801726226 -0.248 -0.146 0.0205541676051268 0.147116702754935 -3.23727034008389 -1.69065820001761 Q9C0E8 KIAA1715 Q9C0E8.S217.p_KIAA1715 Q9C0E8_S217s _1_1_217_217 Q9C0E8 Q9C0E8-4|Q9C0E8-2|Q9C0E8-3 Endoplasmic reticulum junction formation protein lunapark HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20229.20229.3 11.27 11.27 1.182 4 1 1 0 555.3041 1583.9318 S217s TMT10 211 (R) TVTPALsSNVLPR (H) T(0.0)VT(0.0)PALS(0.99)S(0.0)NVLPR s:Phosphorylated S LNPK 48081.4 1 5 1776.1 115.62 HUMAN 1 -16.871 -8.3234 RTVTQVPSDPDPPAP-p Q8N1G0;S351-p RTVTQVPSDPDPPAP 0.664945111459205 0.0941718201205601 -0.0723333333333333 -0.185 3.31552203535564 13.5705418125797 -0.0723333333333334 -0.185 0.466066402016398 0.0439486782983878 -0.78380109220009 -2.61289222092627 Q8N1G0 ZNF687 Q8N1G0.S351.p_ZNF687 Q8N1G0_S351s _1_1_351_351 Q8N1G0 Q8N1G0|Q8N1G0-2|F8WCX2 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37342.37342.4 20.17 17.74 5.246 4 1 1 0 843.9489 3292.8081 S351s TMT10 345 (R) TVTQVPsDPDPPAPLAEGAFLAEASLLK (L) T(0.0)VT(0.0)QVPS(0.99)DPDPPAPLAEGAFLAEAS(0.0)LLK K:TMT10,s:Phosphorylated S ZNF687 131979.7 1 9 156.1 501.88 HUMAN 1 -3.3155 -13.5705 RTYADYESVNECMEG-p P84090;S24-p RTYADYESVNECMEG 0.860558395251919 0.0195952057295762 0.03 0.326666666666667 1.27403705512817 23.4484099133824 0.03 0.326666666666667 0.745755207203582 0.00452021413121814 0.341272284626648 4.65589186731732 P84090 ERH P84090.S24.p_ERH P84090_S24s_1_1_24_24 P84090 P84090|G3V279 Enhancer of rudimentary homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14968.14968.3 17.47 17.47 7.042 4 1 1 0 870.3784 2513.1399 S24s M29m TMT10 18 (R) TYADYEsVNECmEGVCK (M) T(0.0)Y(0.0)ADY(0.0)ES(0.99)VNECM(1.0)EGVCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,m:Oxidized methionine ERH 12429.9 2 3 4064.1 38.28 HUMAN 1 1.274 23.4484 RTYGEPESAGPSRAV-p P50402;S110-p RTYGEPESAGPSRAV 0.257843559813616 0.0970329337247747 0.185666666666667 -0.267 11.1845198813069 13.3954829569091 0.185666666666667 -0.267 0.0761286295630677 0.0457563848697583 2.18846767742797 -2.58111307076031 P50402 EMD P50402.S110.p_EMD P50402_S110s _1_1_110_110 P50402 P50402|Q5HY57 Emerin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7022.7022.2 12.72 12.72 3.216 4 1 1 0 780.3513 1479.7277 S110s TMT10 104 (R) TYGEPEsAGPSR (A) T(0.0)Y(0.0)GEPES(0.99)AGPS(0.0)R s:Phosphorylated S EMD 29050.4 1 5 483.1 297.25 HUMAN 1 11.1845 -13.3955 RVAFISLSPVRRREA-p Q6ZU65;S13-p RVAFISLSPVRRREA 0.778032299460764 0.311957103734021 -0.0393333333333333 -0.099 2.09418822381691 6.68657064619532 -0.0393333333333333 -0.099 0.61742068837451 0.214458337699542 -0.529561117117597 -1.40565855538512 Q6ZU65 UBN2 Q6ZU65.S13.p_UBN2 Q6ZU65_S13s _1_1_13_13 Q6ZU65 Q6ZU65|Q6ZU65-2 Ubinuclein-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27106.27106.3 17.21 17.21 2.078 2 1 1 0 466.5967 1317.8092 S13s TMT10 7 (R) VAFISLsPVR (R) VAFIS(0.0)LS(0.99)PVR s:Phosphorylated S UBN2 146713.5 11 1 1034.1 185.79 HUMAN 1 -2.0942 -6.6866 RVALERCSLLEEELG-p Q13136;S190-p RVALERCSLLEEELG 0.213475099509294 0.0136706666678471 -0.274333333333333 -0.515666666666667 12.9313650892806 25.9025506136603 -0.274333333333333 -0.515666666666667 0.0509170801592574 0.00256888663124853 -2.49870660468991 -5.26916922189567 Q13136 PPFIA1 Q13136.S190.p_PPFIA1 Q13136_S190s _1_1_190_190 Q13136 Q13136|Q13136-2|E9PJZ7 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21787.21787.4 12.26 12.26 8.37 2 1 1 0 649.0933 2513.3798 S190s TMT10 184 (R) VALERCsLLEEELGATHK (E) VALERCS(0.99)LLEEELGAT(0.0)HK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PPFIA1 136347 1 21 248.1 410.18 HUMAN 1 -12.9314 -25.9026 RVALVNDSLSDVTST-p Q7Z2W4;S492-p RVALVNDSLSDVTST 0.745894200275955 0.0711689612142599 -0.0466666666666667 -0.248666666666667 2.41598765120434 15.2593343924171 -0.0466666666666667 -0.248666666666667 0.573325468853922 0.0297897295723096 -0.599074557388653 -2.92528306381591 Q7Z2W4 ZC3HAV1 Q7Z2W4.S492.p_ZC3HAV1 Q7Z2W4_S492s _1_1_492_492 Q7Z2W4 Q7Z2W4|Q7Z2W4-2 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20521.20521.3 15.52 15.52 1.487 8 1 1 0 721.0272 2081.0924 S492s TMT10 486 (R) VALVNDsLSDVTSTTSSR (V) VALVNDS(0.99)LS(0.0)DVT(0.0)S(0.0)T(0.0)T(0.0)S(0.0)S(0.0)R s:Phosphorylated S ZC3HAV1 103198.2 1 23 361.2 343.37 HUMAN 1 -2.416 -15.2593 RVASETHSEGSEYEE-p Q5JSZ5;S1136-p RVASETHSEGSEYEE 0.0147628603234759 0.00178284028886761 -1.059 -1.17 43.1952480187061 43.3497938153508 -1.059 -1.17 4.79154088395106e-05 4.62402973815367e-05 -11.6961911618682 -11.7457414719468 Q5JSZ5 PRRC2B Q5JSZ5.S1136.p_PRRC2B Q5JSZ5_S1136sS1139s_2_2_1136_1139 Q5JSZ5 Q5JSZ5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15929.15929.4 10.58 7.9 1.166 5 2 2 0 628.2859 2350.1815 S1136s S1139s TMT10 1130 (R) VASETHsEGsEYEELPK (R) VAS(0.0)ET(0.0)HS(0.99)EGS(0.99)EY(0.0)EELPK K:TMT10,s:Phosphorylated S PRRC2B 244103.4 6 91 36.2 882.05 HUMAN 1 -43.1952 -43.3498 RVATSRISDAHLADT-p Q9Y657;S124-p RVATSRISDAHLADT 0.317067114607464 0.00799058412544102 -0.176333333333333 -0.505333333333333 9.3426025060415 29.9046043223885 -0.176333333333333 -0.505333333333333 0.116342863684025 0.00102220868788684 -1.86768690678515 -6.39306064175566 Q9Y657 SPIN1 Q9Y657.S124.p_SPIN1 Q9Y657_S124s _1_1_124_124 Q9Y657 Q9Y657 Spindlin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17876.17876.3 16.59 16.59 1.237 4 1 1 0 808.7612 2344.3059 S124s TMT10 118 (R) VATSRIsDAHLADTMIGK (A) VAT(0.0)S(0.0)RIS(0.99)DAHLADT(0.0)MIGK K:TMT10,s:Phosphorylated S SPIN1 29714.2 4 1 3565.1 48.07 HUMAN 1 -9.3426 -29.9046 RVCFAQHTPSLPAES-p P51790-2;T738-p RVCFAQHTPSLPAES 0.180052462758709 0.792540930437292 0.221 -0.0316666666666667 14.6895404276865 1.40675365316472 0.221 -0.0316666666666666 0.0339661213786393 0.723310275271123 2.82042448860502 -0.37297161729418 P51790 CLCN3 P51790.2.T738.p_CLCN3 P51790-2_T738t _1_1_738_738 P51790-2 P51790-2 Isoform 2 of H(+)/Cl(-) exchange transporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17246.17246.4 19.28 19.28 3.157 3 1 1 0 669.1054 2593.4325 T738t TMT10 732 (R) VCFAQHtPSLPAESPRPLK (L) VCFAQHT(0.99)PS(0.0)LPAES(0.0)PRPLK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CLCN3 97757.8 1 1 4518.1 30.4 HUMAN 1 14.6895 -1.4068 RVDLEPVSPRSCLTK-p Q9HCH0;S763-p RVDLEPVSPRSCLTK 0.93306667659969 0.00679864713825252 0.0133333333333333 -0.55 0.591628420935728 31.1110396642388 0.0133333333333333 -0.55 0.872644102343594 0.000774276420391552 0.168053073903226 -6.76616146013014 Q9HCH0 NCKAP5L Q9HCH0.S763.p_NCKAP5L Q9HCH0_S763s _1_1_763_763 Q9HCH0 Q9HCH0|Q9HCH0-3|Q9HCH0-2 Nck-associated protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15869.15869.2 12.09 12.09 99 1 1 1 0 660.8418 1240.7099 S763s TMT10 757 (R) VDLEPVsPR (S) VDLEPVS(1.0)PR s:Phosphorylated S NCKAP5L 140323.1 1 13 609.1 261.98 HUMAN 1 0.5916 -31.111 RVDSLEFSLESQKQM-p P49454;S838-p RVDSLEFSLESQKQM 0.700019935039556 0.0255885678931815 0.054 -0.382333333333333 2.91080806046095 21.6589944527827 0.054 -0.382333333333333 0.511586639443231 0.00682496698270425 0.702237448874205 -4.23998831355117 P49454 CENPF P49454.S838.p_CENPF P49454_S838s _1_1_838_838 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23570.23570.4 11.2 9.33 2.654 4 1 1 0 704.8682 2736.4932 S838s TMT10 824 (K) NSAILQNRVDSLEFsLESQK (Q) NS(0.0)AILQNRVDS(0.0)LEFS(0.99)LES(0.0)QK K:TMT10,s:Phosphorylated S CENPF 371067.2 1 9 47.1 771.73 HUMAN 1 2.9108 -21.659 RVDVGRASPLSSDSP-p Q9Y426;S435-p RVDVGRASPLSSDSP 0.503727443653237 0.39561846975412 -0.113666666666667 -0.0883333333333333 5.49629676748196 5.35363207549471 -0.113666666666667 -0.0883333333333333 0.282078719355488 0.291498814224341 -1.19427986219262 -1.16823578559198 Q9Y426 C2CD2 Q9Y426.S435.p_C2CD2 Q9Y426_S435s _1_1_435_435 Q9Y426 Q9Y426|Q9Y426-3|Q9Y426-2 C2 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14925.14925.4 12.22 10.65 1.16 4 1 1 0 538.7904 2072.1752 S435s TMT10 429 (R) VDVGRAsPLSSDSPVK (T) VDVGRAS(0.99)PLS(0.0)S(0.0)DS(0.0)PVK K:TMT10,s:Phosphorylated S C2CD2 76045.3 5 1 1354.1 150.76 HUMAN 1 -5.4963 -5.3536 RVEAEYLSPLDKSQV-p O75362;S106-p RVEAEYLSPLDKSQV 0.230596370435391 0.0394778082910222 -0.233333333333333 -0.496333333333333 12.2456619914586 18.8281731767249 -0.233333333333333 -0.496333333333333 0.0596257425884454 0.0130973273522267 -2.37598547467334 -3.62870978968798 O75362 ZNF217 O75362.S106.p_ZNF217 O75362_S106s _1_1_106_106 O75362 O75362 Zinc finger protein 217 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22377.22377.3 14.55 14.55 4.585 2 1 1 0 601.3177 1721.9726 S106s TMT10 100 (R) VEAEYLsPLDK (S) VEAEY(0.0)LS(0.99)PLDK K:TMT10,s:Phosphorylated S ZNF217 117152.8 1 1 394.1 330.8 HUMAN 1 -12.2457 -18.8282 RVESGYFSLEKTKQD-p Q6WCQ1-2;S269-p RVESGYFSLEKTKQD 0.112241107364691 0.251135506142142 0.642 -0.21 19.8356836826119 7.90355808189608 0.642 -0.21 0.0103856009553957 0.162048192714383 3.84377472491092 -1.61791963425292 Q6WCQ1 MPRIP Q6WCQ1.2.S269.p_MPRIP Q6WCQ1-2_S269s _1_1_269_269 Q6WCQ1-2 Q6WCQ1-2|Q6WCQ1-3 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21766.21766.3 11.81 10.36 4.859 3 1 1 0 566.2928 1616.8936 S269s TMT10 263 (R) VESGYFsLEK (T) VES(0.0)GY(0.0)FS(0.99)LEK K:TMT10,s:Phosphorylated S MPRIP 118899.7 1 4 204.1 449.03 HUMAN 1 19.8357 -7.9036 RVESVEPSENEASKE-p Q9H307;S417-p RVESVEPSENEASKE 0.862029975440239 0.00580120755760381 -0.043 0.498333333333333 1.26157579386718 32.3372026802286 -0.0430000000000001 0.498333333333333 0.747898083972736 0.000583821026217084 -0.338263437693875 7.16343301752293 Q9H307 PNN Q9H307.S417.p_PNN Q9H307_S413sS417sS422s_3_3_413_422 Q9H307 Q9H307|Q9H307-2 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26266.26266.5 15.52 8.69 1.119 4 3 3 0 1115.1096 5330.6175 S413s S417s N419n S422s TMT10 398 (K) HVIADQEVMETNRVEsVEPsEnEAsKELEPEMEFEIEPDK (E) HVIADQEVMET(0.0)N(0.0)RVES(0.99)VEPS(0.99)EN(0.99)EAS(0.99)KELEPEMEFEIEPDK K:TMT10,s:Phosphorylated S,n:Deamidated PNN 81726.4 1 15 180.1 480.36 HUMAN 1 -1.2616 32.3372 RVFKKSMSLPSH___-p Q9BZD6;S222-p RVFKKSMSLPSH___ 0.987541600775548 0.251979874963257 -0.003 -0.204333333333333 0.109916854668655 7.88282288317793 -0.00299999999999999 -0.204333333333333 0.975008303994733 0.162823734593803 -0.0328021689120824 -1.61432293959731 Q9BZD6 PRRG4 Q9BZD6.S222.p_PRRG4 Q9BZD6_S222s _1_1_222_222 Q9BZD6 Q9BZD6 Transmembrane gamma-carboxyglutamic acid protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10880.10880.2 9.73 9.73 1.485 3 1 1 0 534.2434 987.5131 S222s TMT10 220 (K) SMsLPSH (-) S(0.0)MS(0.99)LPS(0.0)H s:Phosphorylated S PRRG4 25745 1 4 3095.1 60.78 HUMAN 1 -0.1099 -7.8828 RVGEGSSSDEESGGT-p O15357;S1040-p RVGEGSSSDEESGGT 0.636854133601066 0.995379464898605 0.0706666666666667 -0.000666666666666649 3.65415779580175 0.0271677262717251 0.0706666666666667 -0.000666666666666643 0.431106152023225 0.993763925378398 0.850415983783867 -0.00818261296698251 O15357 INPPL1 O15357.S1040.p_INPPL1 O15357_S1040s _1_1_1040_1040 O15357 O15357|A0A0A0MTP6|O15357-2 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.34659.34659.5 21.69 20.23 1.364 7 1 1 0 969.2879 4762.4341 S1040s TMT10 1034 (R) VGEGSSsDEESGGTLPPPDFPPPPLPDSAIFLPPSLDPLPGPVVR (G) VGEGS(0.0)S(0.0)S(0.99)DEES(0.0)GGT(0.0)LPPPDFPPPPLPDS(0.0)AIFLPPS(0.0)LDPLPGPVVR s:Phosphorylated S INPPL1 139395 7 4 1829.1 112.43 HUMAN 1 3.6542 -0.0272 RVGLSPDSPAGDRNS-p Q8WXE0;S396-p RVGLSPDSPAGDRNS 0.664425582516381 0.0569149053499529 0.0606666666666667 -0.241333333333333 3.32050372789707 16.5866425581001 0.0606666666666667 -0.241333333333333 0.465532094424909 0.0219450080347627 0.784791229385379 -3.17930875016535 Q8WXE0 CASKIN2 Q8WXE0.S396.p_CASKIN2 Q8WXE0_S396s _1_1_396_396 Q8WXE0 Q8WXE0|Q8WXE0-2 Caskin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13883.13883.3 19.28 13.5 1.321 6 1 1 0 903.7733 2629.3379 S396s TMT10 390 (R) VGLSPDsPAGDRNSVGSEGSVGSIR (S) VGLS(0.0)PDS(0.99)PAGDRNS(0.0)VGS(0.0)EGS(0.0)VGS(0.0)IR s:Phosphorylated S CASKIN2 127351.5 3 2 984.1 192.08 HUMAN 1 3.3205 -16.5866 RVGPTDGTPEPQVEL-p Q92508;T1854-p RVGPTDGTPEPQVEL 0.387052436335747 0.0421847261286683 0.131 -0.267 7.6270380382921 18.4197851375722 0.131 -0.267 0.172701534405302 0.0143886976299707 1.57038652722831 -3.54473785299435 Q92508 PIEZO1 Q92508.T1854.p_PIEZO1 Q92508_T1854t _1_1_1854_1854 Q92508 Q92508 Piezo-type mechanosensitive ion channel component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13777.13777.4 19.71 19.71 3.589 2 1 1 0 540.0287 2077.1239 T1854t TMT10 1848 (R) VGPTDGtPEPQVELRPR (D) VGPT(0.0)DGT(0.99)PEPQVELRPR t:Phosphorylated T PIEZO1 290036.4 2 6 1703.1 120.26 HUMAN 1 7.627 -18.4198 RVGRLHGSVPNLSRY-p Q9BZF2;S272-p RVGRLHGSVPNLSRY 0.261797446042436 0.148834243042887 0.169666666666667 0.187666666666667 11.0338597438112 10.8914010902004 0.169666666666667 0.187666666666667 0.0788159338430851 0.0814441492268062 2.16204234788297 2.13614227200922 Q9BZF2 OSBPL7 Q9BZF2.S272.p_OSBPL7 Q9BZF2_S272s _1_1_272_272 Q9BZF2 Q9BZF2|J3QLK7|Q9BZF2-2 Oxysterol-binding protein-related protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11230.11230.3 13.19 13.19 13.187 2 1 1 0 463.5803 1308.7586 S272s TMT10 269 (R) LHGsVPNLSR (Y) LHGS(0.99)VPNLS(0.0)R s:Phosphorylated S OSBPL7 96456.8 2 4 4385.1 32.2 HUMAN 1 11.0339 10.8914 RVGSAQPSPPDDLDA-p Q8N3D4;S1168-p RVGSAQPSPPDDLDA 0.107930259374796 0.0539566839659301 0.462666666666667 0.238666666666667 20.3652925205162 16.9036551453365 0.462666666666667 0.238666666666667 0.0091932855103326 0.0204002028311821 3.9577883488851 3.24123055679011 Q8N3D4 EHBP1L1 Q8N3D4.S1168.p_EHBP1L1 Q8N3D4_S1168s _1_1_1168_1168 Q8N3D4 Q8N3D4 EH domain-binding protein 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17105.17105.3 10.96 9.14 1.921 2 1 1 0 754.032 2180.1145 S1168s TMT10 1162 (R) VGSAQPsPPDDLDAGGLAQR (L) VGS(0.0)AQPS(0.99)PPDDLDAGGLAQR s:Phosphorylated S EHBP1L1 162650.3 1 11 593.1 264.13 HUMAN 1 20.3653 16.9037 RVGSFGSSPPGLSST-p Q9Y6G9;S13-p RVGSFGSSPPGLSST 0.651562730292208 0.740283839076173 -0.0706666666666667 -0.0353333333333333 3.48674026447086 1.80051883301066 -0.0706666666666667 -0.0353333333333333 0.448049475800014 0.66061452250657 -0.817653587037465 -0.464105900110183 Q9Y6G9 DYNC1LI1 Q9Y6G9.S13.p_DYNC1LI1 Q9Y6G9_S13s_1_1_13_13 Q9Y6G9 Q9Y6G9|E9PHI6 Cytoplasmic dynein 1 light intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.34424.34424.4 26.68 26.68 1.111 13 1 1 0 1378.3805 5428.5349 S13s N28n N34n TMT10 7 (R) VGSFGSsPPGLSSTYTGGPLGnEIASGnGGAAAGDDEDGQNLWSCILSEVSTR (S) VGS(0.0)FGS(0.0)S(0.99)PPGLS(0.0)S(0.0)T(0.0)Y(0.0)T(0.0)GGPLGN(0.99)EIAS(0.0)GN(0.99)GGAAAGDDEDGQN(0.0)LWS(0.0)CILS(0.0)EVS(0.0)T(0.0)R C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated DYNC1LI1 56863.4 8 2 510.1 287.75 HUMAN 1 -3.4867 -1.8005 RVHDAESSDEDGYDW-p O95049-3;S925-p RVHDAESSDEDGYDW 0.74587727060098 0.448798607940632 -0.049 0.0803333333333334 2.41649610614765 4.63818306148635 -0.049 0.0803333333333334 0.573258350086094 0.343701710781578 -0.599182769338904 1.03711846856036 O95049 TJP3 O95049.3.S925.p_TJP3 O95049-3_S924sS925s_2_2_924_925 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26477.27102.3 12.72 12.72 1.422 4 2 2 0 856.6615 2408.0364 S924s S925s TMT10 919 (R) VHDAEssDEDGYDWGPATDL (-) VHDAES(0.99)S(0.99)DEDGY(0.0)DWGPAT(0.0)DL s:Phosphorylated S TJP3 103593.6 3 30 125.1 544.41 HUMAN 1 -2.4165 4.6382 RVHKRIHTGEKPYKC-p Q8NB50;T192-p RVHKRIHTGEKPYKC 0.202355208694217 0.0016237919479163 0.344666666666667 -1.022 13.462405765857 44.5054439608851 0.344666666666667 -1.022 0.0450567044658269 3.54368902794818e-05 2.59473339729656 -12.3560810171015 Q8NB50 ZFP62 Q8NB50.T192.p_ZFP62 Q8NB50_T192t _1_1_192_192 Q8NB50 O43345|Q05481|O43345-2|A0A075B7G2|Q05481-2|Q8TF20-2|Q8NB50|Q8NB50-3|A0A0B4J2G0|A0A087WYK5|A0A087WSW2|P17038|Q6ZR52-2|A6NNF4|A0A0A0MR41|P17038-2|Q9UII5|Q86V71|O75437|Q7Z3I0|Q8IYB9|Q8NB50-2|Q8TAQ5|Q02386|Q96N22|P0DKX0|A8MTY0|A0A087WZJ7|A0A075B7G4|A6NNF4-3|A0A0G2JMG9|P35789|Q03938|Q03923|Q2VY69|P35789-2|Q8N7Q3|A0A087X0A2|Q03936|A0A087WV98|Q8TF32|Q96N22-2|F5H2M4|Q6ZN08|A6NK75|Q14593|Q8TD23|A0A0G2JP77|A0A075B7G6|A0A087WU35|Q96N38|Q03936-3|Q8IYN0|Q9Y2Q1|Q03923-2|A0A087X1I5|Q8TAQ5-2|O75373|Q49A12|P35789-3|Q9Y2Q1-2|Q68DY1|Q5SXM1|Q96N38-2|Q03936-2|Q9Y2Q1-3|Q9P255|Q9Y2Q1-4|Q8NEM1|Q8IW36|C9IZS8|Q14593-2|B9EG95|Q6ZMV8|O75346|P17019|A8MUV8|O95780|Q03924|A0A0A0MTN5|Q3SXZ3|A8WFQ3|Q15928|O95780-3|A0A075B7G3|Q96H40|Q68DY1-2|Q96N38-3|A0A1W2PNY2|A0A1W2PRC0|Q15929|Q3SXZ3-2|A0A075B7G5|Q5JVG8|B4DX44|O75346-2|O95780-2|Q5JVG8-2 Zinc finger protein 62 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8240.8240.5 14.04 14.04 10.155 2 1 1 0 567.2977 2752.4932 T192t TMT10 190 (R) IHtGEKPYKCEECGK (A) IHT(0.99)GEKPY(0.0)KCEECGK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ZFP62 105647.2 1 100 240.13 415.72 HUMAN 1 13.4624 -44.5054 RVHSAPRSGAPAAES-p Q9NRX4;S33-p RVHSAPRSGAPAAES 0.70004138781017 0.539272693454831 0.0606666666666667 0.0843333333333334 2.90939180022607 3.6081224216416 0.0606666666666667 0.0843333333333334 0.511753498106087 0.435700198540601 0.701947890758578 0.841306719675955 Q9NRX4 PHPT1 Q9NRX4.S33.p_PHPT1 Q9NRX4_S33s _1_1_33_33 Q9NRX4 Q9NRX4|Q9NRX4-2 14 kDa phosphohistidine phosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4145.4145.3 16.08 16.08 2.144 3 1 1 0 668.3548 1923.0812 S33s TMT10 27 (R) VHSAPRsGAPAAESK (E) VHS(0.0)APRS(0.99)GAPAAES(0.0)K K:TMT10,s:Phosphorylated S PHPT1 14003.4 2 1 4780.1 26.75 HUMAN 1 2.9094 3.6081 RVHSEAISPAPEEKA-p Q9BY89;S749-p RVHSEAISPAPEEKA 0.0599482253455959 0.00360607418522774 -0.474 -0.625333333333333 26.7308402408523 36.3336934233222 -0.474 -0.625333333333334 0.00212283371209646 0.000232611219239377 -5.4959300088176 -8.5983990709982 Q9BY89 KIAA1671 Q9BY89.S749.p_KIAA1671 Q9BY89_S749s _1_1_749_749 Q9BY89 Q9BY89 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9513.9513.3 16.83 18.02 5.218 2 1 1 0 644.6678 1852.0217 S749s TMT10 743 (R) VHSEAIsPAPEEK (A) VHS(0.0)EAIS(0.99)PAPEEK K:TMT10,s:Phosphorylated S KIAA1671 197734.4 2 13 105.1 590.35 HUMAN 1 -26.7308 -36.3337 RVIEGSLSPKERTLL-p M0R2Z9;S617-p RVIEGSLSPKERTLL 0.336940767668124 0.542767729972682 -0.161333333333333 -0.061 8.80108500722012 3.57080090555585 -0.161333333333333 -0.0609999999999999 0.131792743678444 0.439460564704161 -1.77393040337218 -0.834013580069634 M0R2Z9 SUGP2 M0R2Z9.S617.p_SUGP2 M0R2Z9_S617s _1_1_617_617 M0R2Z9 M0R2Z9|Q8IX01|Q8IX01-3|Q8IX01-4|M0R3F6 SURP and G-patch domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9192.9394.5 11.51 4.09 2.994 3 1 1 0 631.9525 3075.8043 S617s Hydrogen 596 (R) ADHRVVGTIDQLVKRVIEGSLsPK (E) ADHRVVGT(0.0)IDQLVKRVIEGS(0.0)LS(0.99)PK K:TMT10-Lys-Only,s:Phosphorylated S SUGP2 122455.2 12 8 963.1 194.03 HUMAN 1 -8.8011 -3.5708 RVIPLYNS_______-p Q969V5;S352-p RVIPLYNS_______ 0.997373655286016 0.202970335211543 -0.000666666666666677 0.17 0.020285153307285 9.11186987382735 -0.000666666666666659 0.17 0.995340062197259 0.122691086559893 -0.00611502020574707 1.82706375543303 Q969V5 MUL1 Q969V5.S352.p_MUL1 Q969V5_S352s _1_1_352_352 Q969V5 Q969V5 Mitochondrial ubiquitin ligase activator of NFKB 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25465.25465.2 8.33 8.33 6.063 2 1 1 0 557.7912 1034.6084 S352s TMT10 346 (R) VIPLYNs (-) VIPLY(0.0)NS(0.99) s:Phosphorylated S MUL1 40598 1 1 6985.1 8.33 HUMAN 1 -0.0203 9.1119 RVIQLMPSPIMHPLI-p P41212;S271-p RVIQLMPSPIMHPLI 0.924305950904693 0.678611824466633 -0.0166666666666667 -0.0496666666666667 0.673319614533992 2.30112375217412 -0.0166666666666667 -0.0496666666666667 0.85638300194923 0.588691309709391 -0.189799425857552 -0.574431010548464 P41212 ETV6 P41212.S271.p_ETV6 P41212_S271s _1_1_271_271 P41212 P41212 Transcription factor ETV6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34329.34329.4 20.27 20.27 99 1 1 1 0 595.3307 2298.3392 S271s TMT10 265 (R) VIQLMPsPIMHPLILNPR (H) VIQLMPS(1.0)PIMHPLILNPR s:Phosphorylated S ETV6 53284.3 3 5 2218.1 92.96 HUMAN 1 -0.6733 -2.3011 RVIQRTNSMQQLEQW-p Q9HAU0-6;S416-p RVIQRTNSMQQLEQW 0.963589631791426 0.318559156999531 -0.00700000000000001 -0.0973333333333333 0.309794747977601 6.56940716174059 -0.00700000000000001 -0.0973333333333333 0.931151881620019 0.220322719637738 -0.0904915710165516 -1.38504969136845 Q9HAU0 PLEKHA5 Q9HAU0.6.S416.p_PLEKHA5 Q9HAU0-6_S416s _1_1_416_416 Q9HAU0-6 Q9HAU0-6|Q9HAU0-4|Q9HAU0-2|Q9HAU0-8|Q9HAU0-5|A0JP02|Q9HAU0-3 Isoform 6 of Pleckstrin homology domain-containing family A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27902.27902.3 16.32 10.4 1.107 2 1 1 0 682.0165 1964.0676 S416s TMT10 414 (R) TNsMQQLEQWIK (I) T(0.0)NS(0.99)MQQLEQWIK K:TMT10,s:Phosphorylated S PLEKHA5 147692.6 4 5 374.1 338.83 HUMAN 1 -0.3098 -6.5694 RVKALPLSPRKRLGD-p Q99741;S54-p RVKALPLSPRKRLGD 0.0946777628850844 0.00163920734354588 -0.399666666666667 -1.07866666666667 21.7814430651912 44.3889294576326 -0.399666666666667 -1.07866666666667 0.00663522559793027 3.64004752782911e-05 -4.27212905910078 -12.2932223784291 Q99741 CDC6 Q99741.S54.p_CDC6 Q99741_S54s _1_1_54_54 Q99741 Q99741 Cell division control protein 6 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13720.13720.3 9.42 9.42 99 1 1 1 0 473.9545 1339.8826 S54s TMT10 50 (K) ALPLsPRK (R) ALPLS(1.0)PRK K:TMT10,s:Phosphorylated S CDC6 63689.1 4 2 1629.1 125.37 HUMAN 1 -21.7814 -44.3889 RVKAPNKSLPSAVYC-p O43290;S667-p RVKAPNKSLPSAVYC 0.153998790819573 0.125002043686343 -0.412333333333333 -0.180666666666667 16.3273632761202 11.9106286037499 -0.412333333333334 -0.180666666666667 0.0232950513646955 0.0644076034325447 -3.13130250167448 -2.31534742630412 O43290 SART1 O43290.S667.p_SART1 O43290_S667s _1_1_667_667 O43290 O43290 U4/U6.U5 tri-snRNP-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24237.24237.3 16.66 16.66 2.245 3 1 1 0 640.6583 1839.9927 S667s TMT10 667 (K) sLPSAVYCIEDK (M) S(0.99)LPS(0.0)AVY(0.0)CIEDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SART1 90424.4 1 5 2155.1 95.34 HUMAN 1 -16.3274 -11.9106 RVKEEPPSPPQSPRV-p Q00613;S303-p RVKEEPPSPPQSPRV 0.0832139716415161 0.010646171406777 0.374 0.402333333333333 23.0799551075572 27.6630063848435 0.374 0.402333333333333 0.00492044621854958 0.0017127712385182 4.57335419862755 5.74323642666101 Q00613 HSF1 Q00613.S303.p_HSF1 Q00613_S303s _1_1_303_303 Q00613 Q00613|E9PMQ6|Q00613-2 Heat shock factor protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32968.32968.5 21.33 20.11 2.358 9 1 1 0 958.9119 4710.5718 S303s TMT10 297 (R) VKEEPPsPPQSPRVEEASPGRPSSVDTLLSPTALIDSILR (E) VKEEPPS(0.99)PPQS(0.0)PRVEEAS(0.0)PGRPS(0.0)S(0.0)VDT(0.0)LLS(0.0)PT(0.0)ALIDS(0.0)ILR K:TMT10,s:Phosphorylated S HSF1 57544.7 8 3 1960.1 105.12 HUMAN 1 23.08 27.663 RVKGPVGSLKSVEAI-p Q96K76;S865-p RVKGPVGSLKSVEAI 0.0391574900042898 0.129179148908115 -0.597666666666667 -0.192 31.9398680055803 11.7131501302879 -0.597666666666667 -0.192 0.000639754279135538 0.0674038940034935 -7.0447442470886 -2.28045035749407 Q96K76 USP47 Q96K76.S865.p_USP47 Q96K76_S865s _1_1_865_865 Q96K76 Q96K76|Q96K76-4|Q96K76-2 Ubiquitin carboxyl-terminal hydrolase 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13089.13089.2 8.44 1.65 99 1 1 1 0 598.3465 1115.7189 S865s TMT10 861 (K) GPVGsLK (S) GPVGS(1.0)LK K:TMT10,s:Phosphorylated S USP47 158677.8 1 4 770.1 227.83 HUMAN 1 -31.9399 -11.7132 RVKKLSLSLSPSPQT-p Q96R06;S10-p RVKKLSLSLSPSPQT 0.584672854353861 0.00369002570624909 -0.0736666666666667 -0.595666666666667 4.28976890201702 36.1199407540859 -0.0736666666666667 -0.595666666666667 0.372411522592449 0.000244346388589763 -0.972129574919255 -8.51578508231757 Q96R06 SPAG5 Q96R06.S10.p_SPAG5 Q96R06_S10sS12s_2_2_10_12 Q96R06 Q96R06|J3QRV8|J3KSV2 Sperm-associated antigen 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19954.19954.4 8.56 8.56 1.241 6 2 2 0 691.123 2601.5365 S10s S12s TMT10 6 (K) KLSLsLsPSPQTGKPSMR (T) KLS(0.0)LS(0.99)LS(0.99)PS(0.0)PQT(0.0)GKPS(0.0)MR K:TMT10,s:Phosphorylated S SPAG5 135788.8 1 15 612.1 261.64 HUMAN 1 -4.2898 -36.1199 RVKLDDDSDDDEESK-p Q12872-2;S604-p RVKLDDDSDDDEESK 0.390551410796954 0.0229307347474798 -0.276 0.307 7.5448324774328 22.3834705286985 -0.276 0.307 0.176001655248461 0.00577634264540744 -1.55608581003234 4.40541080382426 Q12872 SFSWAP Q12872.2.S604.p_SFSWAP Q12872-2_S604s _1_1_604_604 Q12872-2 Q12872-2 Isoform 2 of Splicing factor, suppressor of white-apricot homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10301.10301.3 11.92 11.92 5.067 2 1 1 0 640.9399 1840.8336 S604s TMT10 600 (K) LDDDsDDDEESK (E) LDDDS(0.99)DDDEES(0.0)K K:TMT10,s:Phosphorylated S SFSWAP 110466.6 11 4 485.1 296.41 HUMAN 1 -7.5448 22.3835 RVKLINESVDEADME-p Q9H6Z4-3;S208-p RVKLINESVDEADME 0.239656056670629 0.0794726316929369 -0.276 0.201666666666667 11.8595591430088 14.5928744425562 -0.276 0.201666666666667 0.0651694544916178 0.0347306215575984 -2.30744881858721 2.80067043031167 Q9H6Z4 RANBP3 Q9H6Z4.3.S208.p_RANBP3 Q9H6Z4-3_S208s_1_1_208_208 Q9H6Z4-3 Q9H6Z4|Q9H6Z4-2|Q9H6Z4-3 Isoform 3 of Ran-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37057.37057.4 16.19 16.19 1.253 15 1 1 0 1437.1486 5664.6448 S208s N241n TMT10 204 (K) LINEsVDEADMENAGHPSADTPTATNYFLQYISSSLEnSTNSADASSNK (F) LIN(0.0)ES(0.99)VDEADMEN(0.0)AGHPS(0.0)ADT(0.0)PT(0.0)AT(0.0)N(0.0)Y(0.0)FLQY(0.0)IS(0.0)S(0.0)S(0.0)LEN(0.99)S(0.0)T(0.0)N(0.0)S(0.0)ADAS(0.0)S(0.0)N(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated RANBP3 53752.1 2 9 444.1 311.24 HUMAN 1 -11.8596 14.5929 RVKRRKQSPVPALPI-p O95714;S2454-p RVKRRKQSPVPALPI 0.751959847799119 0.656555201768095 -0.097 0.0723333333333334 2.36087496273424 2.49660481902498 -0.097 0.0723333333333334 0.580647424084897 0.562781118266156 -0.587316061970091 0.616093224129159 O95714 HERC2 O95714.S2454.p_HERC2 O95714_S2454s _1_1_2454_2454 O95714 O95714 E3 ubiquitin-protein ligase HERC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.37220.37220.4 26.88 26.88 26.879 2 1 1 0 717.1442 2785.5873 S2454s TMT10 2452 (R) KQsPVPALPIVVQLMEMGFSR (R) KQS(0.99)PVPALPIVVQLMEMGFS(0.0)R K:TMT10,s:Phosphorylated S HERC2 533836.7 8 6 552.1 274.16 HUMAN 1 -2.3609 2.4966 RVKSLKKSLRQSFRR-p Q6P1M3;S649-p RVKSLKKSLRQSFRR 0.807840650085328 0.873768076073362 -0.052 -0.082 1.77984386575372 0.824917727445301 -0.052 -0.0819999999999998 0.663766933216481 0.827005175169023 -0.459475406520972 -0.229343181097131 Q6P1M3 LLGL2 Q6P1M3.S649.p_LLGL2 Q6P1M3_S649s _1_1_649_649 Q6P1M3 Q15334|A0A087WW77|Q6P1M3|J3QRV5|Q6P1M3-2 Lethal(2) giant larvae protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8300.8300.3 8.7 8.7 8.695 2 1 1 0 401.5463 1122.6581 S649s TMT10 649 (K) sLRQSFR (R) S(0.99)LRQS(0.0)FR s:Phosphorylated S LLGL2 114415.8 2 5 881.1 207.2 HUMAN 1 -1.7798 -0.8249 RVKYHTLSLGRKKTL-p Q70EL4;S1111-p RVKYHTLSLGRKKTL 0.460948870369204 0.776089509390509 0.117333333333333 0.0363333333333334 6.20152424083842 1.52339350978382 0.117333333333333 0.0363333333333334 0.239799114973967 0.70414264779619 1.32038511801366 0.400418562246544 Q70EL4 USP43 Q70EL4.S1111.p_USP43 Q70EL4_S1111s _1_1_1111_1111 Q70EL4 Q70EL4|Q70EL4-4|Q70EL4-3|Q70EL4-2 Ubiquitin carboxyl-terminal hydrolase 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10305.10305.2 11.85 11.85 2.452 3 1 1 0 628.323 1175.6734 S1111s TMT10 1107 (K) YHTLsLGR (K) Y(0.0)HT(0.0)LS(0.99)LGR s:Phosphorylated S USP43 124119.2 3 12 817.1 219.69 HUMAN 1 6.2015 1.5234 RVLLRSNSDNNLNAS-p Q9UPX8-3;S422-p RVLLRSNSDNNLNAS 0.43773303002828 0.333622593340859 0.104 0.100333333333333 6.60914126501045 6.31886695331733 0.104 0.100333333333333 0.218316154796792 0.233406692606983 1.39240660045365 1.34083943102615 Q9UPX8 SHANK2 Q9UPX8.3.S422.p_SHANK2 Q9UPX8-3_S422s _1_1_422_422 Q9UPX8-3 Q9UPX8-3 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14873.14873.2 21.79 21.79 2.375 7 1 1 0 1442.627 2804.2855 S422s TMT10 420 (R) SNsDNNLNASAPDWAVCSTATSHR (S) S(0.0)NS(0.99)DNNLNAS(0.0)APDWAVCS(0.0)T(0.0)AT(0.0)S(0.0)HR C:Carbamidomethylation,s:Phosphorylated S SHANK2 202341.2 4 4 86.1 628.23 HUMAN 1 6.6091 6.3189 RVLMKSPSPALHPPQ-p Q9H6S0;S1223-p RVLMKSPSPALHPPQ 0.957810192524261 0.226078941261076 0.00866666666666666 -0.118666666666667 0.363473893706848 8.50471195256847 0.00866666666666667 -0.118666666666667 0.91971360443113 0.141100581884072 0.105587180947251 -1.72203994869873 Q9H6S0 YTHDC2 Q9H6S0.S1223.p_YTHDC2 Q9H6S0_S1223s _1_1_1223_1223 Q9H6S0 Q9H6S0 Probable ATP-dependent RNA helicase YTHDC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10515.10515.4 11.17 11.17 1.993 2 1 1 0 424.985 1616.9524 S1223s TMT10 1221 (K) SPsPALHPPQK (Y) S(0.0)PS(0.99)PALHPPQK K:TMT10,s:Phosphorylated S YTHDC2 161671.9 3 10 668.1 249.65 HUMAN 1 0.3635 -8.5047 RVLPCGPSPQHHRAL-p P98174;S82-p RVLPCGPSPQHHRAL 0.307172848614777 0.109411600099727 -0.197666666666667 0.177 9.58283975448865 12.6923860198894 -0.197666666666667 0.177 0.1100819273056 0.0537974137574713 -1.90931747899753 2.45447271767985 P98174 FGD1 P98174.S82.p_FGD1 P98174_S82s _1_1_82_82 P98174 P98174 FYVE, RhoGEF and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6883.6883.3 14.7 14.7 99 1 1 1 0 565.2787 1613.8532 S82s TMT10 76 (R) VLPCGPsPQHHR (A) VLPCGPS(1.0)PQHHR C:Carbamidomethylation,s:Phosphorylated S FGD1 107757.1 2 2 1189.1 168.38 HUMAN 1 -9.5828 12.6924 RVLQALGSEPIQYAV-p O00159-3;S897-p RVLQALGSEPIQYAV 0.872158487982599 0.0258549518202345 -0.0243333333333333 0.331 1.16241496011428 21.5876693580184 -0.0243333333333333 0.331 0.765171003687797 0.00693798032947155 -0.314136580160795 4.22391223858451 O00159 MYO1C O00159.3.S897.p_MYO1C O00159-3_S897s _1_1_897_897 O00159-3 O00159|O00159-3|F5H6E2 Isoform 3 of Unconventional myosin-Ic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32841.32841.3 20.04 20.04 3.878 2 1 1 0 817.1363 2369.4208 S897s TMT10 891 (R) VLQALGsEPIQYAVPVVK (Y) VLQALGS(0.99)EPIQY(0.0)AVPVVK K:TMT10,s:Phosphorylated S MYO1C 120424.7 1 9 296.4 379.15 HUMAN 1 -1.1624 21.5877 RVLQQQGSQERSPGL-p Q96A22;S62-p RVLQQQGSQERSPGL 0.622172474425454 0.874717339186603 0.106666666666667 0.0166666666666667 3.83097139905274 0.818483829022358 0.106666666666667 0.0166666666666667 0.413907084668107 0.828231258112015 0.884678561584856 0.227684125303501 Q96A22 C11orf52 Q96A22.S62.p_C11orf52 Q96A22_S62s _1_1_62_62 Q96A22 Q96A22 Uncharacterized protein C11orf52 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7052.7052.2 14.37 6.37 99 1 1 1 0 741.3694 1401.7648 S62s TMT10 56 (R) VLQQQGsQER (S) VLQQQGS(1.0)QER s:Phosphorylated S C11orf52 14148.5 4 2 1649.1 123.6 HUMAN 1 3.831 0.8185 RVMKFSVSPVVRVAV-p P13639;S502-p RVMKFSVSPVVRVAV 0.242071630356468 0.0184540333840829 -0.223666666666667 -0.423 11.7809242964972 23.862094445095 -0.223666666666667 -0.423 0.0663601822897973 0.00410951486280027 -2.29353590270484 -4.75564748160685 P13639 EEF2 P13639.S502.p_EEF2 P13639_S502s _1_1_502_502 P13639 P13639 Elongation factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19458.19458.2 12.64 5.42 2.206 2 1 1 0 600.323 1119.6724 S502s TMT10 499 (K) FSVsPVVR (V) FS(0.0)VS(0.99)PVVR s:Phosphorylated S EEF2 96306.4 2 8 693.1 242.75 HUMAN 1 -11.7809 -23.8621 RVNAKKLTPLLPPPL-p Q9Y2U8;T365-p RVNAKKLTPLLPPPL 0.941100878539265 0.0688340947029094 -0.0156666666666667 -0.294 0.518555012714446 15.4574653905708 -0.0156666666666667 -0.294 0.887451236245707 0.0284612166323894 -0.148332613742868 -2.96269161670337 Q9Y2U8 LEMD3 Q9Y2U8.T365.p_LEMD3 Q9Y2U8_T365t _1_1_365_365 Q9Y2U8 Q9Y2U8 Inner nuclear membrane protein Man1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35894.35894.5 18.79 14.29 9.852 8 1 1 0 702.3895 3427.9577 T365t TMT10 363 (K) KLtPLLPPPLTDMDSTLDSSTGSLLK (T) KLT(0.99)PLLPPPLT(0.0)DMDS(0.0)T(0.0)LDS(0.0)S(0.0)T(0.0)GS(0.0)LLK K:TMT10,t:Phosphorylated T LEMD3 100851.5 3 12 412.1 321.94 HUMAN 1 -0.5186 -15.4575 RVPAMPGSPVEVKIQ-p O43439-4;S43-p RVPAMPGSPVEVKIQ 0.34689437832203 0.380910017248404 -0.136666666666667 -0.105 8.54408397608605 5.5683211165843 -0.136666666666667 -0.105 0.139827181092931 0.277439241420389 -1.72943972785465 -1.20699388822105 O43439 CBFA2T2 O43439.4.S43.p_CBFA2T2 O43439-4_S43s _1_1_43_43 O43439-4 O43439-4|O43439-5 Isoform 4 of Protein CBFA2T2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15640.15640.3 9.98 9.98 99 1 1 1 0 635.6866 1825.077 S43s TMT10 36 (K) RVPAMPGsPVEVK (I) RVPAMPGS(1.0)PVEVK K:TMT10,s:Phosphorylated S CBFA2T2 68762.1 2 1 2492.1 81.27 HUMAN 1 -8.5441 -5.5683 RVPATRRSPGPGPSQ-p Q9P1Y5;S769-p RVPATRRSPGPGPSQ 0.749520863039578 0.421418445191683 0.0493333333333333 0.0783333333333334 2.38264304688875 4.99496832112652 0.0493333333333333 0.0783333333333334 0.577744334413951 0.316594355678566 0.591967296392715 1.10291321651664 Q9P1Y5 CAMSAP3 Q9P1Y5.S769.p_CAMSAP3 Q9P1Y5_S769s _1_1_769_769 Q9P1Y5 Q9P1Y5 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4747.4747.2 9.82 3.3 6.139 3 1 1 0 688.3317 1295.6905 S769s TMT10 769 (R) sPGPGPSQSPR (S) S(0.99)PGPGPS(0.0)QS(0.0)PR s:Phosphorylated S CAMSAP3 135546 4 16 217.1 432.4 HUMAN 1 2.3826 4.995 RVPGFVGSPLAAMNP-p Q86TB9-4;S261-p RVPGFVGSPLAAMNP 0.369489108717469 0.00685566093054045 -0.126 -0.514 8.01956263609766 31.043249947764 -0.126 -0.514 0.157777015381935 0.00078645704150898 -1.63855404737315 -6.74473898298844 Q86TB9 PATL1 Q86TB9.4.S261.p_PATL1 Q86TB9-4_S261s _1_1_261_261 Q86TB9-4 Q86TB9|Q86TB9-4|Q86TB9-2 Isoform 4 of Protein PAT1 homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.28590.28590.3 14.57 14.57 99 1 1 1 0 675.0335 1943.1189 S261s TMT10 255 (R) VPGFVGsPLAAMNPK (L) VPGFVGS(1.0)PLAAMNPK K:TMT10,s:Phosphorylated S PATL1 80249 1 7 1540.1 133.07 HUMAN 1 -8.0196 -31.0432 RVPLSHGYSKLRSSA-p Q8NFH8;Y212-p RVPLSHGYSKLRSSA 0.76634179505546 0.084633414096391 -0.0713333333333333 0.371 2.21632418522505 14.1960926131219 -0.0713333333333334 0.371 0.600298946900759 0.0380531610095055 -0.556192959562259 2.72732905248672 Q8NFH8 REPS2 Q8NFH8.Y212.p_REPS2 Q8NFH8_Y212y _1_1_212_212 Q8NFH8 Q8NFH8|Q8NFH8-4|Q8NFH8-2|Q8NFH8-3 RalBP1-associated Eps domain-containing protein 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11478.11478.3 15.72 15.72 3.221 3 1 1 0 509.2778 1445.8517 Y212y TMT10 206 (R) VPLSHGySK (L) VPLS(0.0)HGY(0.99)S(0.0)K K:TMT10,y:Phosphorylated Y REPS2 72045.7 2 1 227.1 15.72 HUMAN 1 -2.2163 14.1961 RVPSPPPSPRLRRRT-p O94827-2;S932-p RVPSPPPSPRLRRRT 0.892095557925807 0.0544812684353702 0.029 0.315333333333333 0.969917268028553 16.8477946288294 0.029 0.315333333333333 0.799849491787091 0.0206642923350936 0.266315374635866 3.23028251523411 O94827 PLEKHG5 O94827.2.S932.p_PLEKHG5 O94827-2_S928sS932s_2_2_928_932 O94827-2 O94827-6|O94827-2|O94827-7 Isoform 2 of Pleckstrin homology domain-containing family G member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11374.11374.3 10.48 10.48 4.217 3 2 2 0 653.9814 1799.9965 S928s S932s TMT10 920 (R) APESPRVPsPPPsPR (L) APES(0.0)PRVPS(0.99)PPPS(0.99)PR s:Phosphorylated S PLEKHG5 121312.9 1 6 2914.1 66.07 HUMAN 1 0.9699 16.8478 RVQAGPGSPRRARGR-p Q6PK04;S19-p RVQAGPGSPRRARGR 0.187498948197206 0.00248584650157384 -0.204 -0.904333333333333 14.2691190506516 39.8833105513881 -0.204 -0.904333333333333 0.0374186482836967 0.000102723295776285 -2.74246442024799 -10.0789986474395 Q6PK04 CCDC137 Q6PK04.S19.p_CCDC137 Q6PK04_S19s _1_1_19_19 Q6PK04 Q6PK04 Coiled-coil domain-containing protein 137 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5198.5198.3 12.25 4.43 99 1 1 1 0 393.2021 1097.6265 S19s TMT10 13 (R) VQAGPGsPR (R) VQAGPGS(1.0)PR s:Phosphorylated S CCDC137 33287.8 5 1 3943.1 40.42 HUMAN 1 -14.2691 -39.8833 RVQAMQISSEKEEDD-p Q9UKY7;S106-p RVQAMQISSEKEEDD 0.825130077485234 0.570498074951917 0.0386666666666667 0.063 1.60922920126452 3.28540751844163 0.0386666666666667 0.063 0.690362320521112 0.469309394796893 0.420412065089209 0.777693619084901 Q9UKY7 CDV3 Q9UKY7.S106.p_CDV3 Q9UKY7_S106s _1_1_106_106 Q9UKY7 Q9UKY7|Q9UKY7-2 Protein CDV3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13775.13775.3 17.17 17.17 1.234 2 1 1 0 916.4528 2667.375 S106s TMT10 100 (R) VQAMQIsSEKEEDDNEK (R) VQAMQIS(0.99)S(0.0)EKEEDDNEK K:TMT10,s:Phosphorylated S CDV3 27334.4 16 5 802.1 222.73 HUMAN 1 1.6092 3.2854 RVQEHEDSGDSEVEN-p Q9Y5J1;S121-p RVQEHEDSGDSEVEN 0.589224306297175 0.0980923575295458 0.0713333333333333 -0.177666666666667 4.23041468145279 13.3300990008466 0.0713333333333333 -0.177666666666667 0.377536140568719 0.0464504686352003 0.960925223855202 -2.56926995925463 Q9Y5J1 UTP18 Q9Y5J1.S121.p_UTP18 Q9Y5J1_S121sS124s_2_2_121_124 Q9Y5J1 Q9Y5J1 U3 small nucleolar RNA-associated protein 18 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9689.10269.3 18.84 18.84 99 2 2 2 0 840.6922 2360.1254 S121s S124s TMT10 115 (R) VQEHEDsGDsEVENEAK (G) VQEHEDS(1.0)GDS(1.0)EVENEAK K:TMT10,s:Phosphorylated S UTP18 62458.9 13 3 2737.1 72.25 HUMAN 1 4.2304 -13.3301 RVQEKPDSPGGSTQI-p Q13459;S1290-p RVQEKPDSPGGSTQI 0.200339870079459 0.100714122656824 -0.207 -0.179333333333333 13.5869781010879 13.1706079220548 -0.207 -0.179333333333333 0.0437826646828113 0.0481880339666862 -2.61739471486956 -2.54043972111507 Q13459 MYO9B Q13459.S1290.p_MYO9B Q13459_S1290s _1_1_1290_1290 Q13459 Q13459|M0R0P8|Q13459-2 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7779.7779.4 15.16 15.16 3.248 3 1 1 0 567.0475 2185.1977 S1290s TMT10 1284 (R) VQEKPDsPGGSTQIQR (Y) VQEKPDS(0.99)PGGS(0.0)T(0.0)QIQR K:TMT10,s:Phosphorylated S MYO9B 244993.9 7 10 211.1 438.12 HUMAN 1 -13.587 -13.1706 RVQSKEPTPKVKRKG-p Q5T011;T703-p RVQSKEPTPKVKRKG 0.347879336040844 0.826485360620122 -0.130333333333333 0.0313333333333333 8.5198589226052 1.15780314982603 -0.130333333333333 0.0313333333333334 0.140609319930006 0.765983976903331 -1.72524524679561 0.312974843873857 Q5T011 SZT2 Q5T011.T703.p_SZT2 Q5T011_T703t _1_1_703_703 Q5T011 Q5T011|Q5T011-5|Q5T011-4 KICSTOR complex protein SZT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7846.7846.3 12.37 6.68 4.021 2 1 1 0 594.344 1701.0514 T703t TMT10 697 (R) VQSKEPtPK (V) VQS(0.0)KEPT(0.99)PK K:TMT10,t:Phosphorylated T SZT2 382015.9 4 2 964.1 193.97 HUMAN 1 -8.5199 1.1578 RVQSKIGSLDNITHV-p P10636;S673-p RVQSKIGSLDNITHV 0.969977322086965 0.199721328867987 -0.00666666666666667 -0.130333333333333 0.260228132365276 9.20413349362463 -0.00666666666666666 -0.130333333333333 0.941840120909659 0.12011206972705 -0.0764079145318028 -1.8430257582694 P10636 MAPT P10636.S673.p_MAPT P10636_S673s _1_1_673_673 P10636 P10636-9|A0A0G2JMX7|A0A0G2JS76|A0A0G2JPD5|A0A0G2JQJ7|P10636-8|P10636-7|P10636-5|P10636-6|P10636-4|P10636-2 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19524.19892.3 15.65 11.11 2.673 2 1 1 0 706.3762 2037.1493 S673s TMT10 671 (K) IGsLDNITHVPGGGNK (K) IGS(0.99)LDNIT(0.0)HVPGGGNK K:TMT10,s:Phosphorylated S MAPT 79154.4 7 20 119.1 551.6 HUMAN 1 -0.2602 -9.2041 RVREKRMSNELENYF-p Q8TAP9;S133-p RVREKRMSNELENYF 0.282955735863136 0.0847774187878305 -0.199 0.238 10.3658723391189 14.1877658749773 -0.199 0.238 0.0919205821356319 0.0381261904104549 -2.04535290388182 2.72579639751782 Q8TAP9 MPLKIP Q8TAP9.S133.p_MPLKIP Q8TAP9_S133s_1_1_133_133 Q8TAP9 Q8TAP9 M-phase-specific PLK1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.35725.35725.5 20.56 20.56 1.169 10 1 1 0 1144.9659 5623.8332 M132m S133s N166n TMT10 131 (K) RmsNELENYFKPSMLEDPWAGLEPVSVVDISQQYSnTQTFTGK (K) RM(0.99)S(0.99)N(0.0)ELEN(0.0)Y(0.0)FKPS(0.0)M(0.0)LEDPWAGLEPVS(0.0)VVDIS(0.0)QQY(0.0)S(0.0)N(0.99)T(0.0)QT(0.0)FT(0.0)GK K:TMT10,m:Oxidized methionine,s:Phosphorylated S,n:Deamidated MPLKIP 19203.6 13 7 1651.1 123.4 HUMAN 1 -10.3659 14.1878 RVRFACHSASLTVRN-p Q15233;S147-p RVRFACHSASLTVRN 0.167853660719156 0.359761064708486 -0.225666666666667 -0.102333333333333 15.4763742115476 5.89016378859224 -0.225666666666667 -0.102333333333333 0.0283375682321854 0.257622399618749 -2.96828222173818 -1.26467666411609 Q15233 NONO Q15233.S147.p_NONO Q15233_S147s _1_1_147_147 Q15233 Q15233|Q15233-2 Non-POU domain-containing octamer-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11429.11429.3 14.29 14.29 3.03 3 1 1 0 519.9201 1477.7783 S147s TMT10 143 (R) FACHsASLTVR (N) FACHS(0.99)AS(0.0)LT(0.0)VR C:Carbamidomethylation,s:Phosphorylated S NONO 54344.7 3 3 2102.1 97.61 HUMAN 1 -15.4764 -5.8902 RVRGGCVSPERGPTF-p Q9ULD5-3;S605-p RVRGGCVSPERGPTF 0.310574696890336 0.134282341797339 -0.152666666666667 0.156 9.49304314207247 11.4922094684856 -0.152666666666667 0.156 0.112381722876097 0.070921686285323 -1.89375258636629 2.24151345957533 Q9ULD5 ZNF777 Q9ULD5.3.S605.p_ZNF777 Q9ULD5-3_S605s _1_1_605_605 Q9ULD5-3 Q9ULD5-3|Q9ULD5-2 Isoform 3 of Zinc finger protein 777 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11666.11666.3 15.85 15.85 3.771 2 1 1 0 714.3582 2061.0952 S605s TMT10 601 (R) GGCVsPERGPTFNPK (H) GGCVS(0.99)PERGPT(0.0)FNPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF777 95258 4 4 2050.1 100.48 HUMAN 1 -9.493 11.4922 RVRGRNDSGEENVPL-p Q6R327-3;S21-p RVRGRNDSGEENVPL 0.830498755736582 0.668990133242619 -0.031 0.0436666666666667 1.55369183543514 2.38791537162944 -0.031 0.0436666666666667 0.699247329542859 0.577043379722901 -0.40752716902259 0.593018439859643 Q6R327 RICTOR Q6R327.3.S21.p_RICTOR Q6R327-3_S21s _1_1_21_21 Q6R327-3 Q6R327-3|Q6R327-4 Isoform 3 of Rapamycin-insensitive companion of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30794.30794.4 14.77 10.7 6.86 3 1 1 0 901.4509 3522.7986 S21s TMT10 19 (R) NDsGEENVPLDLTREPSDNLREILQNVAR (L) NDS(0.99)GEENVPLDLT(0.0)REPS(0.0)DNLREILQNVAR s:Phosphorylated S RICTOR 197118.3 6 1 452.1 308.36 HUMAN 1 -1.5537 2.3879 RVRPCVVYGGADIGQ-p A0A0D9SF53;Y301-p RVRPCVVYGGADIGQ 0.313179859530122 0.596124931439691 0.170333333333333 -0.250333333333333 9.43300808053667 3.04238147452751 0.170333333333333 -0.250333333333333 0.113946028280075 0.496320087327082 1.88334925728382 -0.728904247781115 A0A0D9SF53 NotFound A0A0D9SF53.Y301.p_NotFound A0A0D9SF53_Y301y _1_1_301_301 A0A0D9SF53 A0A0D9SF53|O00571|O15523|O15523-2|A0A0D9SG12|O00571-2|A0A0D9SFB3 ATP-dependent RNA helicase DDX3X GG20160819_MSz_CCLE_T4D7_pY_Injection_02.17594.17594.3 16.29 11.6 99 1 1 1 0 733.0441 2117.1487 Y301y TMT10 295 (R) VRPCVVyGGADIGQQIR (D) VRPCVVY(1.0)GGADIGQQIR C:Carbamidomethylation,y:Phosphorylated Y DDX3X 82160.2 2 3 61.1 38.06 HUMAN 1 9.433 -3.0424 RVRSPTRSPSVKTSP-p Q03164-3;S165-p RVRSPTRSPSVKTSP 0.333220403018828 0.0516125847155946 -0.207666666666667 0.259333333333333 8.91072304892727 17.1776132205048 -0.207666666666667 0.259333333333333 0.128507269273406 0.0191530824382603 -1.79290857096217 3.29515577024011 Q03164 KMT2A Q03164.3.S165.p_KMT2A Q03164-3_S165s _1_1_165_165 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5160.5160.3 9.59 4.38 2.595 4 1 1 0 499.6132 1416.8575 S165s TMT10 161 (R) SPTRsPSVK (T) S(0.0)PT(0.0)RS(0.99)PS(0.0)VK K:TMT10,s:Phosphorylated S KMT2A 436608.3 1 4 26.1 936.8 HUMAN 1 -8.9107 17.1776 RVRVRRASISEPSDT-p Q8N1F8;S398-p RVRVRRASISEPSDT 0.0719549135296335 0.0153374743357658 0.381 0.473333333333333 24.6460029900839 25.0950882866331 0.381 0.473333333333333 0.00343083396564602 0.00309379242188425 4.95467533372356 5.06155130327225 Q8N1F8 STK11IP Q8N1F8.S398.p_STK11IP Q8N1F8_S398s _1_1_398_398 Q8N1F8 Q8N1F8|C9JQV3|Q8N1F8-2 Serine/threonine-protein kinase 11-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4417.4417.2 14.22 10.5 2.041 4 1 1 0 868.878 1656.7824 S398s Hydrogen 396 (R) RAsISEPSDTDPEPR (T) RAS(0.99)IS(0.0)EPS(0.0)DT(0.0)DPEPR s:Phosphorylated S STK11IP 122825.3 5 2 813.1 220.97 HUMAN 1 24.646 25.0951 RVSAPEVSVGHKGGK-p Q09666;S337-p RVSAPEVSVGHKGGK 0.449207968067092 0.432284490071129 -0.101666666666667 0.08 6.42018232827807 4.85358475095783 -0.101666666666667 0.08 0.228024633923538 0.327070612995775 -1.35908650201547 1.07694489302046 Q09666 AHNAK Q09666.S337.p_AHNAK Q09666_S337s _1_1_337_337 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12405.12405.3 12.76 12.76 5.948 2 1 1 0 549.9683 1567.9208 S337s TMT10 331 (R) VSAPEVsVGHK (G) VS(0.0)APEVS(0.99)VGHK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 18 1.1 4313.36 HUMAN 1 -6.4202 4.8536 RVSAPGESIEALVDV-p Q8IVF2;S2666-p RVSAPGESIEALVDV 0.194822091031277 0.0753289554570543 -0.286666666666667 0.214333333333333 13.8572233475852 14.9059934217224 -0.286666666666667 0.214333333333333 0.0411412672842898 0.0323147393920394 -2.66674170840575 2.85898740274157 Q8IVF2 AHNAK2 Q8IVF2.S2666.p_AHNAK2 Q8IVF2_S2666s _1_1_2666_2666 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32407.32407.3 18.99 18.99 5.699 3 1 1 0 794.4246 2301.2954 S2666s TMT10 2660 (R) VSAPGEsIEALVDVSELK (V) VS(0.0)APGES(0.99)IEALVDVS(0.0)ELK K:TMT10,s:Phosphorylated S AHNAK2 617759.6 2 14 237.1 418.35 HUMAN 1 -13.8572 14.906 RVSGAGFSPSSKMEG-p Q9C0C2;S1138-p RVSGAGFSPSSKMEG 0.306735184126758 0.00309831083212838 -0.210666666666667 -0.771333333333333 9.59881508847761 37.6903678083492 -0.210666666666667 -0.771333333333333 0.109677739563966 0.000170201435698925 -1.91208713941283 -9.1395051915291 Q9C0C2 TNKS1BP1 Q9C0C2.S1138.p_TNKS1BP1 Q9C0C2_S1138s _1_1_1138_1138 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22287.22287.4 18.96 18.96 4.523 6 1 1 0 703.8578 2732.4408 S1138s TMT10 1121 (R) SYQFGIIGNDRVSGAGFsPSSK (M) S(0.0)Y(0.0)QFGIIGNDRVS(0.0)GAGFS(0.99)PS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 15 48 4.1 2105.7 HUMAN 1 -9.5988 -37.6904 RVSGIGPSAARKFVD-p P06746;S109-p RVSGIGPSAARKFVD 0.201147832961288 0.929641552337573 0.209666666666667 0.01 13.5330176932398 0.447288722408242 0.209666666666667 0.01 0.0443300509732036 0.902134159449313 2.60757209548173 0.128832637865369 P06746 POLB P06746.S109.p_POLB P06746_S109s _1_1_109_109 P06746 P06746|E5RIJ0 DNA polymerase beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10500.10500.2 9.5 9.5 6.372 2 1 1 0 612.3218 1143.6683 S109s TMT10 103 (R) VSGIGPsAAR (K) VS(0.0)GIGPS(0.99)AAR s:Phosphorylated S POLB 38348.1 1 2 5317.1 20.65 HUMAN 1 13.533 0.4473 RVSKLRASVADPGQL-p Q8IYJ3;S69-p RVSKLRASVADPGQL 0.0893916699807837 0.978108959441114 -0.364333333333333 -0.0033333333333333 22.3269231270561 0.137686804712529 -0.364333333333333 -0.00333333333333331 0.00585204540786851 0.968793730276031 -4.39709133824233 -0.0409600640019836 Q8IYJ3 SYTL1 Q8IYJ3.S69.p_SYTL1 Q8IYJ3_S69s _1_1_69_69 Q8IYJ3 Q8IYJ3|Q8IYJ3-2|A0A087X1N4 Synaptotagmin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15577.15577.3 12.07 8.65 99 1 1 1 0 598.3406 1713.0423 S69s TMT10 66 (K) LRAsVADPGQLK (I) LRAS(1.0)VADPGQLK K:TMT10,s:Phosphorylated S SYTL1 62141.3 1 1 1335.1 152.58 HUMAN 1 -22.3269 -0.1377 RVSPAHRSPTVLCQK-p Q5VUA4;S2035-p RVSPAHRSPTVLCQK 0.301378662873895 0.160285211680087 0.146 0.162 9.77553260424233 10.4586248765324 0.146 0.162 0.105304453734691 0.0899782438034332 1.94273787279601 2.06063751336447 Q5VUA4 ZNF318 Q5VUA4.S2035.p_ZNF318 Q5VUA4_S2035s _1_1_2035_2035 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9187.9187.2 10.9 10.9 1.17 2 1 1 0 621.3121 1161.6499 S2035s Hydrogen 2035 (R) sPTVLCQK (V) S(0.99)PT(0.0)VLCQK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S ZNF318 252762.4 3 31 37.1 870.88 HUMAN 1 9.7755 10.4586 RVSPGLPSPNLENGA-p Q9UGP4;S277-p RVSPGLPSPNLENGA 0.90137191050127 0.087064041164927 -0.0193333333333333 -0.212333333333333 0.885264833179325 14.0362978134313 -0.0193333333333333 -0.212333333333333 0.815593050676187 0.0394793704495836 -0.244845412459563 -2.69796172961818 Q9UGP4 LIMD1 Q9UGP4.S277.p_LIMD1 Q9UGP4_S277s _1_1_277_277 Q9UGP4 Q9UGP4|C9JRJ5 LIM domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22996.22996.4 18.61 18.61 5.063 2 1 1 0 641.3389 2482.3615 S277s TMT10 271 (R) VSPGLPsPNLENGAPAVGPVQPR (T) VS(0.0)PGLPS(0.99)PNLENGAPAVGPVQPR s:Phosphorylated S LIMD1 73900.6 6 5 1009.1 188.97 HUMAN 1 -0.8853 -14.0363 RVTAKELSLVNKNKS-p Q9UHB6-4;S24-p RVTAKELSLVNKNKS 0.993618410078581 0.264012487913359 -0.00133333333333335 0.111333333333333 0.0576890861962635 7.6191340024141 -0.00133333333333335 0.111333333333333 0.98680443206085 0.173016132472082 -0.017316829152598 1.56853947828579 Q9UHB6 LIMA1 Q9UHB6.4.S24.p_LIMA1 Q9UHB6-4_S24s _1_1_24_24 Q9UHB6-4 Q9UHB6-4|F8VRN8 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18202.18202.2 8.44 2.41 99 1 1 1 0 670.8834 1260.7928 S24s TMT10 22 (K) ELsLVNK (N) ELS(1.0)LVNK K:TMT10,s:Phosphorylated S LIMA1 85678.4 1 4 42.1 822.82 HUMAN 1 -0.0577 7.6191 RVTNVLITPGKSQMD-p Q96HE9;T287-p RVTNVLITPGKSQMD 0.315167340543659 0.00957046944143617 -0.179666666666667 -0.717333333333333 9.38309243800045 28.4773714786717 -0.179666666666667 -0.717333333333333 0.115263222205319 0.00141991665117922 -1.87470106905827 -5.97306768502627 Q96HE9 PRR11 Q96HE9.T287.p_PRR11 Q96HE9_T287t _1_1_287_287 Q96HE9 Q96HE9 Proline-rich protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20710.20710.3 12.63 11.68 6.859 2 1 1 0 527.3131 1499.9561 T287t TMT10 281 (R) VTNVLItPGK (S) VT(0.0)NVLIT(0.99)PGK K:TMT10,t:Phosphorylated T PRR11 40597.8 3 4 1094.1 178.6 HUMAN 1 -9.3831 -28.4774 RVTQGAASPGHGIQE-p Q9HB58-6;S380-p RVTQGAASPGHGIQE 0.86020254858192 0.0531707306191217 -0.0253333333333333 -0.301 1.27748852346524 16.9966398277985 -0.0253333333333333 -0.301 0.74516276864744 0.0199680666322758 -0.342104768312424 -3.25948993471431 Q9HB58 SP110 Q9HB58.6.S380.p_SP110 Q9HB58-6_S380s _1_1_380_380 Q9HB58-6 Q9HB58-6|Q9HB58-7|Q9HB58-3|Q9HB58-5|G5E9C0 Isoform 6 of Sp110 nuclear body protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8603.8603.3 17.03 16.78 3.009 2 1 1 0 673.3536 1938.0809 S380s TMT10 374 (R) VTQGAAsPGHGIQEK (L) VT(0.0)QGAAS(0.99)PGHGIQEK K:TMT10,s:Phosphorylated S SP110 82536.7 6 5 1355.1 150.64 HUMAN 1 -1.2775 -16.9966 RVTQILQSPAFREDL-p Q9UEY8;S64-p RVTQILQSPAFREDL 0.379231264309477 0.0131588910628106 0.184333333333333 -0.469666666666667 7.78007821033234 26.1957510226177 0.184333333333333 -0.469666666666667 0.166721718804237 0.00240118099731524 1.5969853722707 -5.34604700046358 Q9UEY8 ADD3 Q9UEY8.S64.p_ADD3 Q9UEY8_S64s _1_1_64_64 Q9UEY8 Q9UEY8|Q9UEY8-2 Gamma-adducin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.35580.35580.5 23.97 23.97 3.966 2 1 1 0 735.1963 3591.9846 S64s TMT10 58 (R) VTQILQsPAFREDLECLIQEQMKK (G) VT(0.0)QILQS(0.99)PAFREDLECLIQEQMKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ADD3 79495.5 2 20 264.2 396.09 HUMAN 1 7.7801 -26.1958 RVTSQRCSLEFLEDA-p Q9BTV7;S130-p RVTSQRCSLEFLEDA 0.925621036663268 0.0583650119787409 0.02 -0.238 0.662466305425854 16.4391087573264 0.02 -0.238 0.85852583668543 0.0227033071274415 0.186927970891447 -3.15066201554176 Q9BTV7 CABLES2 Q9BTV7.S130.p_CABLES2 Q9BTV7_S130s _1_1_130_130 Q9BTV7 Q9BTV7 CDK5 and ABL1 enzyme substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27331.27331.3 18.65 18.65 99 1 1 1 0 744.6735 2152.0364 S130s TMT10 129 (R) CsLEFLEDAVGCAPAQR (T) CS(1.0)LEFLEDAVGCAPAQR C:Carbamidomethylation,s:Phosphorylated S CABLES2 52690.7 5 2 2299.1 89.16 HUMAN 1 0.6625 -16.4391 RVTSSMSSPSMQPKK-p Q13136;S1172-p RVTSSMSSPSMQPKK 0.788058272894985 0.207208160030084 0.0436666666666667 -0.127 1.99349868126998 8.99138560718043 0.0436666666666667 -0.127 0.631902584832156 0.126142501545131 0.507361794992985 -1.80622255131246 Q13136 PPFIA1 Q13136.S1172.p_PPFIA1 Q13136_S1172s_1_1_1172_1172 Q13136 Q13136|Q13136-2 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10524.10524.2 10.8 10.8 1.103 6 1 1 0 960.9653 1824.96 S1172s M1175m TMT10 1166 (R) VTSSMSsPSmQPK (K) VT(0.0)S(0.0)S(0.0)M(0.0)S(0.0)S(0.99)PS(0.0)M(0.99)QPK K:TMT10,s:Phosphorylated S,m:Oxidized methionine PPFIA1 136347 9 35 248.1 410.18 HUMAN 1 1.9935 -8.9914 RVVACNLYPFVKTVA-p P31939;Y104-p RVVACNLYPFVKTVA 0.179935774950283 0.0167256092394986 -0.267666666666667 0.391333333333333 14.6983699190335 24.5243146004938 -0.267666666666667 0.391333333333333 0.0338971361780497 0.00352832465916262 -2.82206930654972 4.91831344382928 P31939 ATIC P31939.Y104.p_ATIC P31939_Y104y _1_1_104_104 P31939 P31939|P31939-2 Bifunctional purine biosynthesis protein PURH GG20160819_MSz_CCLE_T4D7_pY_Injection_02.31024.31024.3 12.6 12.6 99 1 1 1 0 616.6673 1768.0232 Y104y TMT10 98 (R) VVACNLyPFVK (T) VVACNLY(1.0)PFVK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y ATIC 65128.2 1 1 132.1 24.15 HUMAN 1 -14.6984 24.5243 RVVDLEGSLKVVYPS-p Q8N1G4;S561-p RVVDLEGSLKVVYPS 0.123844498909698 0.0326962748945092 -0.365666666666667 0.283666666666667 18.8547984882661 20.0440442370033 -0.365666666666667 0.283666666666667 0.0130172771407247 0.00989909691862144 -3.6373737909796 3.88476375992068 Q8N1G4 LRRC47 Q8N1G4.S561.p_LRRC47 Q8N1G4_S561s _1_1_561_561 Q8N1G4 Q8N1G4 Leucine-rich repeat-containing protein 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20863.20863.3 8.48 3.69 99 1 1 1 0 499.9488 1417.8667 S561s TMT10 555 (R) VVDLEGsLK (V) VVDLEGS(1.0)LK K:TMT10,s:Phosphorylated S LRRC47 64042.3 1 6 814.1 220.85 HUMAN 1 -18.8548 20.044 RVVKKDHSVNSFKNQ-p A0A0A0MR88;S909-p RVVKKDHSVNSFKNQ 0.486093065914574 0.761500504080935 0.0996666666666667 0.0393333333333334 5.77163788260186 1.63567483840041 0.0996666666666667 0.0393333333333334 0.26475014811092 0.686171247840543 1.24377389742225 0.426471265008249 A0A0A0MR88 NotFound A0A0A0MR88.S909.p_NotFound A0A0A0MR88_S909s _1_1_909_909 A0A0A0MR88 A0A0A0MR88|A0A096LPC5|Q9Y4E1-4|Q9Y4E1-2|Q9Y4E1-3|J3KP36|Q9Y4E1-5 WASH complex subunit 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7997.7997.3 8.88 5.24 8.881 2 1 1 0 491.2504 1391.7683 S909s TMT10 907 (K) DHsVNSFK (N) DHS(0.99)VNS(0.0)FK K:TMT10,s:Phosphorylated S WASHC2C 147223 1 11 12.99 1178.3 HUMAN 1 5.7716 1.6357 RVVLASASPRRQEIL-p O95671;S21-p RVVLASASPRRQEIL 0.446255553665082 0.84342475725858 0.107666666666667 -0.0316666666666666 6.46350213777749 1.03840717228479 0.107666666666667 -0.0316666666666666 0.225761450237112 0.78733450123048 1.36673503311567 -0.28345684218676 O95671 ASMTL O95671.S21.p_ASMTL O95671_S21s _1_1_21_21 O95671 O95671|O95671-2 N-acetylserotonin O-methyltransferase-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8119.8119.3 14.06 14.06 4.011 2 1 1 0 455.5918 1284.7949 S21s TMT10 14 (K) RVVLASAsPR (R) RVVLAS(0.0)AS(0.99)PR s:Phosphorylated S ASMTL 69597.2 6 1 2260.1 90.98 HUMAN 1 6.4635 -1.0384 RVVLREASFKRPVVI-p O95049-3;S635-p RVVLREASFKRPVVI 0.819781554496128 0.810746109314699 -0.0336666666666667 0.0263333333333334 1.66300705093619 1.27753420604808 -0.0336666666666667 0.0263333333333334 0.681866406991641 0.745154930467981 -0.432808022826402 0.342080701883552 O95049 TJP3 O95049.3.S635.p_TJP3 O95049-3_S635s _1_1_635_635 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29126.29126.4 20.11 18.08 99 1 1 1 0 759.937 2956.7625 S635s TMT10 633 (R) EAsFKRPVVILGPVADIAMQK (L) EAS(1.0)FKRPVVILGPVADIAMQK K:TMT10,s:Phosphorylated S TJP3 103593.6 3 15 125.1 544.41 HUMAN 1 -1.663 1.2775 RVVPEDGSPEKRCPG-p Q02040;S537-p RVVPEDGSPEKRCPG 0.164298040401019 0.145880129428577 0.341 -0.173 15.7120723646738 11.0129547402038 0.341 -0.173 0.02684063359747 0.079196233234666 3.01309833891637 -2.15740510167312 Q02040 AKAP17A Q02040.S537.p_AKAP17A Q02040_S537s _1_1_537_537 Q02040 Q02040 A-kinase anchor protein 17A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8677.8677.2 14.02 9.54 99 1 1 1 0 875.9605 1670.9478 S537s TMT10 531 (R) VVPEDGsPEKR (C) VVPEDGS(1.0)PEKR K:TMT10,s:Phosphorylated S AKAP17A 81361.6 11 3 1803.1 114.1 HUMAN 1 15.7121 -11.013 RVVQMLGSLGGQINK-p P78527;S861-p RVVQMLGSLGGQINK 0.554720459620056 0.0053737355742873 0.08 0.78 4.72511631847853 32.9596680455666 0.08 0.78 0.336890192583002 0.00050586332635723 1.05343462614887 7.37242759439479 P78527 PRKDC P78527.S861.p_PRKDC P78527_S861s _1_1_861_861 P78527 P78527|P78527-2 DNA-dependent protein kinase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27502.27502.3 15.4 15.4 99 1 1 1 0 661.3682 1902.1247 S861s TMT10 855 (R) VVQMLGsLGGQINK (N) VVQMLGS(1.0)LGGQINK K:TMT10,s:Phosphorylated S PRKDC 474044.1 1 3 362.1 342.68 HUMAN 1 4.7251 32.9597 RVVRIVKSESGYGFN-p Q96L92;S49-p RVVRIVKSESGYGFN 0.844154809597015 0.154518871824549 0.0293333333333333 0.167 1.42402155737133 10.664681355149 0.0293333333333333 0.167 0.720440044309037 0.0858088070925456 0.37710005949231 2.09655067012574 Q96L92 SNX27 Q96L92.S49.p_SNX27 Q96L92_S49s _1_1_49_49 Q96L92 Q96L92|Q96L92-3|H7C603 Sorting nexin-27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17217.17217.3 14.39 14.39 2.132 3 1 1 0 665.3559 1914.0849 S49s TMT10 46 (R) IVKsESGYGFNVR (G) IVKS(0.99)ES(0.0)GY(0.0)GFNVR K:TMT10,s:Phosphorylated S SNX27 61891.7 1 1 3679.1 45.49 HUMAN 1 1.424 10.6647 RVVRRSLSPVFNHTM-p Q8IYJ3;S470-p RVVRRSLSPVFNHTM 0.49696828746939 0.023509919426035 0.093 0.34 5.59305409316992 22.2146965472945 0.093 0.34 0.27586372148975 0.00600523967593179 1.21171405328086 4.36652268483973 Q8IYJ3 SYTL1 Q8IYJ3.S470.p_SYTL1 Q8IYJ3_S470s _1_1_470_470 Q8IYJ3 Q8IYJ3|Q8IYJ3-2|A0A087X1N4 Synaptotagmin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29163.29163.3 19.68 19.68 2.582 4 1 1 0 878.0893 2552.2805 S470s TMT10 468 (R) SLsPVFNHTMVYDGFGPADLR (Q) S(0.0)LS(0.99)PVFNHT(0.0)MVY(0.0)DGFGPADLR s:Phosphorylated S SYTL1 62141.3 4 10 1335.1 152.58 HUMAN 1 5.5931 22.2147 RVVVDALSGLKGDLA-p P12532-2;S227-p RVVVDALSGLKGDLA 0.410789406643469 0.22101866054034 0.197666666666667 0.157666666666667 7.12710842515822 8.63237091190267 0.197666666666667 0.157666666666667 0.193771168180358 0.137013357501723 1.48324504423633 1.74412530183008 P12532 CKMT1B P12532.2.S227.p_CKMT1B P12532-2_S227s _1_1_227_227 P12532-2 P12532-2|F8WCN3 Isoform 2 of Creatine kinase U-type, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28619.28619.3 13.19 13.19 99 1 1 1 0 703.4009 2028.2217 S227s TMT10 221 (R) VVVDALsGLKGDLAGR (Y) VVVDALS(1.0)GLKGDLAGR K:TMT10,s:Phosphorylated S CKMT1A 50933.3 1 3 1688.1 120.83 HUMAN 1 7.1271 8.6324 RVYQPPDSPGYFDGH-p Q5W125;S143-p RVYQPPDSPGYFDGH 0.421053324853859 0.522156577521319 -0.115666666666667 0.081 6.9205546540729 3.7926524435581 -0.115666666666667 0.081 0.203209746743275 0.417575255623497 -1.4470994347602 0.877138487414814 Q5W125 NMRK1 Q5W125.S143.p_NMRK1 Q5W125_S143s _1_1_143_143 Q5W125 Q5W125|Q9NWW6|Q9NWW6-2 Nicotinamide riboside kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30649.30649.3 18.05 18.05 2.476 4 1 1 0 1012.1603 2954.4951 S143s TMT10 137 (R) VYQPPDsPGYFDGHVWPMYLK (Y) VY(0.0)QPPDS(0.99)PGY(0.0)FDGHVWPMY(0.0)LK K:TMT10,s:Phosphorylated S NMRK1 24082 4 1 5574.1 18.05 HUMAN 1 -6.9206 3.7927 RVYQTSPTDEDEEDE-p Q9UKE5;T987-p RVYQTSPTDEDEEDE 0.766782196280721 0.837196792710555 -0.0443333333333333 -0.0276666666666667 2.20921752987621 1.08378077725803 -0.0443333333333334 -0.0276666666666667 0.601282060956649 0.779151520054357 -0.55465194473518 -0.294734537608664 Q9UKE5 TNIK Q9UKE5.T987.p_TNIK Q9UKE5_T987t _1_1_987_987 Q9UKE5 Q9UKE5|Q9UKE5-4|Q9UKE5-2|Q9UKE5-6|Q9UKE5-3|Q9UKE5-7|Q9UKE5-5|Q9UKE5-8 TRAF2 and NCK-interacting protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.31388.31388.4 27.4 27.4 2 8 1 1 0 1064.5034 4175.0192 T987t TMT10 981 (R) VYQTSPtDEDEEDEESSAAALFTSELLRQEQAK (L) VY(0.0)QT(0.0)S(0.0)PT(0.99)DEDEEDEES(0.0)S(0.0)AAALFT(0.0)S(0.0)ELLRQEQAK K:TMT10,t:Phosphorylated T TNIK 155453.9 5 45 131.1 535.29 HUMAN 1 -2.2092 -1.0838 RWAAHGASPEDFSLT-p Q86UU1;S501-p RWAAHGASPEDFSLT 0.479494742996737 0.00578350556809829 -0.095 -0.491666666666667 5.87568647913742 32.3562740429081 -0.095 -0.491666666666667 0.258482622982803 0.000581262888466327 -1.26238635298067 -7.16976164929804 Q86UU1 PHLDB1 Q86UU1.S501.p_PHLDB1 Q86UU1_S501s _1_1_501_501 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23309.23309.3 21.92 21.92 3.218 3 1 1 0 732.3538 2115.0821 S501s TMT10 495 (R) WAAHGAsPEDFSLTLGAR (G) WAAHGAS(0.99)PEDFS(0.0)LT(0.0)LGAR s:Phosphorylated S PHLDB1 152129.1 4 12 99.1 600.41 HUMAN 1 -5.8757 -32.3563 RWERFVHSENQHLVS-p P68400;S287-p RWERFVHSENQHLVS 0.95234052937084 0.0403455591727108 -0.012 -0.300333333333333 0.421123630740068 18.6951651356112 -0.012 -0.300333333333333 0.907585684203644 0.0135046547694197 -0.121624169214455 -3.60125251257857 P68400 CSNK2A1 P68400.S287.p_CSNK2A1 P68400_S287s _1_1_287_287 P68400 P68400|Q8NEV1 Casein kinase II subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26132.26132.4 18.64 15.15 5.192 2 1 1 0 716.6171 2783.4769 S287s TMT10 284 (R) FVHsENQHLVSPEALDFLDK (L) FVHS(0.99)ENQHLVS(0.0)PEALDFLDK K:TMT10,s:Phosphorylated S CSNK2A1 45256.9 1 6 2696.1 73.72 HUMAN 1 -0.4211 -18.6952 RWGPRPGSSRRGIPP-p P48634;S932-p RWGPRPGSSRRGIPP 0.492994289859056 0.129179148908115 -0.254333333333333 -0.484333333333333 5.65584315560567 11.7131791029519 -0.254333333333333 -0.484333333333333 0.271904055011624 0.0674034443399718 -1.22300316538016 -2.28045547063448 P48634 PRRC2A P48634.S932.p_PRRC2A P48634_S932s _1_1_932_932 P48634 P48634|P48634-3|P48634-2 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7161.7161.3 9.22 9.22 1.202 2 1 1 0 436.8849 1228.6748 S932s TMT10 926 (R) WGPRPGsSR (R) WGPRPGS(0.99)S(0.0)R s:Phosphorylated S PRRC2A 229315.4 1 15 36.1 882.05 HUMAN 1 -5.6558 -11.7132 RWHQPPPSPLPLRES-p Q68DK7;S442-p RWHQPPPSPLPLRES 0.309222647686921 0.0435481324596422 -0.158666666666667 0.328333333333333 9.53020792379635 18.232640225429 -0.158666666666667 0.328333333333333 0.111424118665475 0.0150222843213606 -1.90019389511677 3.50658347495532 Q68DK7 MSL1 Q68DK7.S442.p_MSL1 Q68DK7_S442s _1_1_442_442 Q68DK7 Q68DK7|J3KSZ8|J3QQY0 Male-specific lethal 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16989.17197.3 11.55 11.55 99 1 1 1 0 578.6418 1653.9427 S442s TMT10 436 (R) WHQPPPsPLPLR (E) WHQPPPS(1.0)PLPLR s:Phosphorylated S MSL1 67811.9 4 13 324.1 362.01 HUMAN 1 -9.5302 18.2326 RWKAEGHSDDESDSE-p B4E0Y9;S322-p RWKAEGHSDDESDSE 0.0869195095593095 0.739253358356835 0.628 -0.136333333333333 22.6296620748131 1.81041831587101 0.628 -0.136333333333333 0.00545800328244357 0.659110406152434 4.46742148276483 -0.466343797342482 B4E0Y9 NotFound B4E0Y9.S322.p_NotFound B4E0Y9_S322s _1_1_322_322 B4E0Y9 B4E0Y9|Q9P289|Q8NBY1|Q9P289-3|Q9P289-2 Serine/threonine-protein kinase 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6767.6767.4 18.63 18.63 3.001 8 1 1 0 759.8232 2956.3081 S322s TMT10 316 (R) WKAEGHsDDESDSEGSDSESTSR (E) WKAEGHS(0.99)DDES(0.0)DS(0.0)EGS(0.0)DS(0.0)ES(0.0)T(0.0)S(0.0)R K:TMT10,s:Phosphorylated S STK26 49468.3 2 3 982.2 192.43 HUMAN 1 22.6297 -1.8104 RWKHRSLSPVPRNAE-p A2AJT9;S17-p RWKHRSLSPVPRNAE 0.406715246318421 0.068537762840327 0.153333333333333 0.265 7.21506605527617 15.4866918788059 0.153333333333333 0.265 0.189886196059116 0.0282703257085639 1.49860936355255 2.96822435193109 A2AJT9 CXorf23 A2AJT9.S17.p_CXorf23 A2AJT9_S17s _1_1_17_17 A2AJT9 A2AJT9|A2AJT9-2|A2AJT9-3 BCLAF1 and THRAP3 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10425.10425.2 8.87 3.21 2.217 2 1 1 0 532.7895 984.6039 S17s TMT10 15 (R) SLsPVPR (N) S(0.0)LS(0.99)PVPR s:Phosphorylated S BCLAF3 84269.3 1 1 1202.1 166.95 HUMAN 1 7.2151 15.4867 RWKSMRKSPLGGGGG-p Q68DK7;S205-p RWKSMRKSPLGGGGG 0.714354134547226 0.00826927420702601 0.0633333333333333 -0.456333333333333 2.7542705732135 29.6248313123542 0.0633333333333334 -0.456333333333333 0.530362663124708 0.00109022683789831 0.670044128502548 -6.30894901762253 Q68DK7 MSL1 Q68DK7.S205.p_MSL1 Q68DK7_S205s _1_1_205_205 Q68DK7 Q68DK7|J3KSZ8|J3QQY0|Q68DK7-2 Male-specific lethal 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13922.13922.3 22.39 22.39 11.003 4 1 1 0 734.0325 2120.117 S205s TMT10 205 (K) sPLGGGGGSGASSQAACLK (Q) S(0.99)PLGGGGGS(0.0)GAS(0.0)S(0.0)QAACLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MSL1 67811.9 11 7 324.1 362.01 HUMAN 1 2.7543 -29.6248 RWKSRRRSVSQDLIK-p Q9UPQ0-4;S365-p RWKSRRRSVSQDLIK 0.235621777934373 0.131444570378739 -0.369333333333333 0.312333333333333 12.0245696675645 11.6176039417392 -0.369333333333333 0.312333333333333 0.0627397860318285 0.0689032339460902 -2.33669330309809 2.26359864300088 Q9UPQ0 LIMCH1 Q9UPQ0.4.S365.p_LIMCH1 Q9UPQ0-4_S365s _1_1_365_365 Q9UPQ0-4 Q9UPQ0-3|G5EA03|Q9UPQ0-4 Isoform 4 of LIM and calponin homology domains-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13371.13371.4 8.04 2.58 8.044 2 1 1 0 672.1401 2605.5695 S365s TMT10 365 (R) sVSQDLIKKEEERK (K) S(0.99)VS(0.0)QDLIKKEEERK K:TMT10,s:Phosphorylated S LIMCH1 121463.5 1 10 679.1 246.52 HUMAN 1 -12.0246 11.6176 RWLPGDPSPRGRSQS-p J3KP75;S46-p RWLPGDPSPRGRSQS 0.988576956790509 0.0325545439165347 0.00266666666666667 -0.44 0.102987176389693 20.0718746137978 0.00266666666666666 -0.44 0.976565286043887 0.00983586453177586 0.0307578055884186 -3.89073500468813 J3KP75 NotFound J3KP75.S46.p_NotFound J3KP75_S46s _1_1_46_46 J3KP75 J3KP75 Phosphatase and actin regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18368.18368.2 10.61 4.88 99 1 1 1 0 667.3288 1253.684 S46s TMT10 40 (R) WLPGDPsPR (G) WLPGDPS(1.0)PR s:Phosphorylated S PHACTR2 68408.7 1 1 2025.1 101.72 HUMAN 1 0.103 -20.0719 RWNNNKKSPIKASDL-p Q5QJE6;S381-p RWNNNKKSPIKASDL 0.153364244244344 0.0010212605030329 -0.265 -1.26066666666667 16.3688168106625 51.5786128916294 -0.265 -1.26066666666667 0.0230737572318515 6.95246339296362e-06 -3.13933115300798 -16.8002576590452 Q5QJE6 DNTTIP2 Q5QJE6.S381.p_DNTTIP2 Q5QJE6_S381s_1_1_381_381 Q5QJE6 Q5QJE6|J3KP30 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12122.12122.3 9.25 9.25 1.615 1 1 1 0 742.7628 2145.3314 N377n S381s TMT10 375 (R) WNnNKKsPIK (A) WN(0.0)N(0.99)N(0.0)KKS(1.0)PIK K:TMT10,n:Deamidated,s:Phosphorylated S DNTTIP2 84866.9 6 14 448.1 309.47 HUMAN 1 -16.3688 -51.5786 RWNVISKSQLKNIKK-p O43776;S61-p RWNVISKSQLKNIKK 0.186904399781084 0.0469576566617599 -0.479 -0.443 14.3201986913968 17.7696158912745 -0.479 -0.443 0.0369811260385759 0.0167123841929074 -2.75189938442233 -3.41303999035258 O43776 NARS O43776.S61.p_NARS O43776_S61s _1_1_61_61 O43776 O43776|O43776-2|K7EJ19 Asparagine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22044.22044.3 12.6 12.6 1.359 2 1 1 0 657.3867 1890.178 S61s TMT10 55 (R) WNVISKsQLK (N) WNVIS(0.0)KS(0.99)QLK K:TMT10,s:Phosphorylated S NARS 63797.6 3 1 3872.1 41.5 HUMAN 1 -14.3202 -17.7696 RWQQMAKSPEFPSVS-p Q8WW38;S581-p RWQQMAKSPEFPSVS 0.0719549135296335 0.618723381878048 -0.615666666666667 -0.0646666666666666 24.6379984352128 2.83351317615652 -0.615666666666667 -0.0646666666666666 0.00343716322460419 0.520773267014779 -4.95267332918213 -0.686295917578811 Q8WW38 ZFPM2 Q8WW38.S581.p_ZFPM2 Q8WW38_S581s _1_1_581_581 Q8WW38 Q8WW38|Q8WW38-2|E7ET52 Zinc finger protein ZFPM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21546.21546.3 13.24 13.24 1.508 3 1 1 0 882.7932 2566.3943 S581s TMT10 575 (R) WQQMAKsPEFPSVSEK (M) WQQMAKS(0.99)PEFPS(0.0)VS(0.0)EK K:TMT10,s:Phosphorylated S ZFPM2 130381.7 2 6 1154.1 171.84 HUMAN 1 -24.638 -2.8335 RWRSLPGSPEFLHQE-p Q96S53;S460-p RWRSLPGSPEFLHQE 0.2592179584854 0.0951559016776592 0.179666666666667 0.234333333333333 11.1404743921669 13.5103164964736 0.179666666666667 0.234333333333333 0.0769046430577935 0.0445623771933372 2.18073772567458 2.60194758435859 Q96S53 TESK2 Q96S53.S460.p_TESK2 Q96S53_S456sS460s_2_2_456_460 Q96S53 Q96S53|Q96S53-2|Q96S53-3 Dual specificity testis-specific protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23384.23384.4 15.75 15.75 15.754 4 2 2 0 863.8812 3292.5692 S456s S460s Hydrogen 456 (R) sLPGsPEFLHQEACPFVGREESLSDGPPPR (L) S(0.99)LPGS(0.99)PEFLHQEACPFVGREES(0.0)LS(0.0)DGPPPR C:Carbamidomethylation,s:Phosphorylated S TESK2 64265.9 5 5 1787.1 114.9 HUMAN 1 11.1405 13.5103 RWSARNPSPGTSAKN-p Q9P212;S1060-p RWSARNPSPGTSAKN 0.122576750325325 0.122200418194899 0.323 0.259333333333333 18.9758003472405 12.0413948754805 0.323 0.259333333333333 0.012659599463526 0.0624971930834171 3.662511926183 2.33850746807696 Q9P212 PLCE1 Q9P212.S1060.p_PLCE1 Q9P212_S1060s _1_1_1060_1060 Q9P212 Q9P212|Q9P212-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4611.4611.2 9.54 9.54 9.545 3 1 1 0 584.2856 1087.5945 S1060s Hydrogen 1058 (R) NPsPGTSAK (N) NPS(0.99)PGT(0.0)S(0.0)AK K:TMT10-Lys-Only,s:Phosphorylated S PLCE1 261905 2 2 1584.1 129.49 HUMAN 1 18.9758 12.0414 RWTDGSLSPPAKEPL-p O15085-2;S1520-p RWTDGSLSPPAKEPL 0.524824849913072 0.908696407990322 -0.136333333333333 0.014 5.181358172433 0.582868115630191 -0.136333333333333 0.014 0.303294254144172 0.874406119681764 -1.13719145575341 0.165686961064843 O15085 ARHGEF11 O15085.2.S1520.p_ARHGEF11 O15085-2_S1520s _1_1_1520_1520 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19490.19704.3 17.42 12.6 2.155 5 1 1 0 851.4313 2472.3135 S1520s TMT10 1514 (R) WTDGSLsPPAKEPLASDSR (N) WT(0.0)DGS(0.0)LS(0.99)PPAKEPLAS(0.0)DS(0.0)R K:TMT10,s:Phosphorylated S ARHGEF11 173153.4 4 19 228.1 424.05 HUMAN 1 -5.1814 0.5829 RWTRDDHSASRQPEY-p F8W0Q9;S110-p RWTRDDHSASRQPEY 0.580132943065601 0.951627785467761 0.0736666666666667 0.00700000000000001 4.34854983221488 0.307728444549704 0.0736666666666667 0.00700000000000003 0.367404961484346 0.931595014146887 0.983195977394194 0.0898989964525832 F8W0Q9 NotFound F8W0Q9.S110.p_NotFound F8W0Q9_S110s _1_1_110_110 F8W0Q9 Q8NEY8|Q8NEY8-3|F8W0Q9|Q8NEY8-2|Q8NEY8-8|Q8NEY8-9|B7Z8L1|Q8NEY8-6|F8WF16|Q8NEY8-5|F8VP48 Periphilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3918.3918.4 9.09 9.09 2.529 3 1 1 0 443.2009 1689.8142 S110s TMT10 107 (R) DDHsASRQPEYR (D) DDHS(0.99)AS(0.0)RQPEY(0.0)R s:Phosphorylated S PPHLN1 44796.3 3 2 663.1 251.09 HUMAN 1 4.3485 0.3077 RYAALSLSETSLTEK-p C9J069;S509-p RYAALSLSETSLTEK 0.958739785397171 0.0570175575743654 0.00766666666666667 0.311333333333333 0.354583852893448 16.5760050656987 0.00766666666666667 0.311333333333333 0.921598193344709 0.0219988254306022 0.10309815406848 3.17723966751345 C9J069 C9orf172 C9J069.S509.p_C9orf172 C9J069_S509s _1_1_509_509 C9J069 C9J069 Uncharacterized protein C9orf172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24697.24697.2 19.55 19.55 1.5 6 1 1 0 1026.0378 1971.105 S509s TMT10 503 (R) YAALSLsETSLTEK (G) Y(0.0)AALS(0.0)LS(0.99)ET(0.0)S(0.0)LT(0.0)EK K:TMT10,s:Phosphorylated S C9orf172 107960.6 5 11 430.1 316.49 HUMAN 1 0.3546 16.576 RYAGLDDTDSEDELP-p Q9NZC7-3;T12-p RYAGLDDTDSEDELP 0.931970571874728 0.178815572886967 0.014 0.137 0.606861052373945 9.83102866341613 0.014 0.137 0.869588714320643 0.103967388106197 0.172131614785382 1.95159454594403 Q9NZC7 WWOX Q9NZC7.3.T12.p_WWOX Q9NZC7-3_T12tS14s_2_2_12_14 Q9NZC7-3 Q9NZC7-2|Q9NZC7-6|Q9NZC7-5|Q9NZC7-7|F5H3R5|Q9NZC7-3 Isoform 3 of WW domain-containing oxidoreductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25186.25397.2 18.2 18.2 9.141 3 2 2 0 1342.0391 2523.1361 T12t S14s TMT10 6 (R) YAGLDDtDsEDELPPGWEER (T) Y(0.0)AGLDDT(0.99)DS(0.99)EDELPPGWEER t:Phosphorylated T,s:Phosphorylated S WWOX 21672.8 2 3 4795.1 26.51 HUMAN 1 0.6069 9.831 RYALLRKSKERQGLD-p O43286;S347-p RYALLRKSKERQGLD 0.55812241502505 0.945765679801271 0.219666666666667 0.015 4.67896856797963 0.348725396282229 0.219666666666667 0.015 0.340489044885247 0.922842230859445 1.04488472163529 0.101446182054748 O43286 B4GALT5 O43286.S347.p_B4GALT5 O43286_S347s _1_1_347_347 O43286 O43286 Beta-1,4-galactosyltransferase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20857.20857.4 7.52 3.35 1.521 3 1 1 0 817.7019 3187.8481 S347s Hydrogen 326 (K) SIPHHHRGEVQFLGRYALLRKsK (E) S(0.0)IPHHHRGEVQFLGRY(0.0)ALLRKS(0.99)K K:TMT10-Lys-Only,s:Phosphorylated S B4GALT5 45346 1 1 7138.1 7.52 HUMAN 1 4.679 0.3487 RYALYDASFETKESR-p P60981;S88-p RYALYDASFETKESR 0.306452172412958 0.819569074656242 -0.18 -0.039 9.61725580159045 1.20914553200206 -0.18 -0.0389999999999999 0.1092130208283 0.756981815428051 -1.91528445338332 -0.325514740066725 P60981 DSTN P60981.S88.p_DSTN P60981_S88s _1_1_88_88 P60981 P60981|P60981-2|F6RFD5 Destrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22114.22114.3 10.69 10.69 3.589 4 1 1 0 615.9738 1765.9413 S88s TMT10 82 (R) YALYDAsFETK (E) Y(0.0)ALY(0.0)DAS(0.99)FET(0.0)K K:TMT10,s:Phosphorylated S DSTN 18961.8 2 3 2609.1 76.79 HUMAN 1 -9.6173 -1.2091 RYANNSNYKNDVMIR-p Q96A72;Y42-p RYANNSNYKNDVMIR 0.253428545649867 0.0229636990525408 0.167333333333333 0.479333333333333 11.360426998856 22.3729289827023 0.167333333333333 0.479333333333333 0.0731067201334745 0.00579038048022576 2.21937786855813 4.40297553032614 Q96A72 MAGOHB Q96A72.Y42.p_MAGOHB Q96A72_Y42y _1_1_42_42 Q96A72 Q96A72|P61326|P61326-2|F5H6N1 Protein mago nashi homolog 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.4624.4624.2 12.57 12.57 5.364 3 1 1 0 641.788 1202.6003 Y42y Hydrogen 36 (R) YANNSNyK (N) Y(0.0)ANNS(0.0)NY(0.99)K K:TMT10-Lys-Only,y:Phosphorylated Y MAGOHB 17332.5 7 1 83.1 31.23 HUMAN 1 11.3604 22.3729 RYCVRPNSGIIDPGS-p Q9P0L0-2;S65-p RYCVRPNSGIIDPGS 0.355435296240703 0.639090543168944 0.126333333333333 -0.0513333333333333 8.34876985527692 2.6486242629724 0.126333333333333 -0.0513333333333333 0.146259139668954 0.543422446961083 1.69561533569563 -0.648008378565888 Q9P0L0 VAPA Q9P0L0.2.S65.p_VAPA Q9P0L0-2_S65s _1_1_65_65 Q9P0L0-2 Q9P0L0-2 Isoform 2 of Vesicle-associated membrane protein-associated protein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29231.29231.4 21.28 15.53 2.797 7 1 1 0 1074.0428 4213.1462 S65s TMT10 58 (R) RYCVRPNsGIIDPGSTVTVSVMLQPFDYDPNEK (S) RY(0.0)CVRPNS(0.99)GIIDPGS(0.0)T(0.0)VT(0.0)VS(0.0)VMLQPFDY(0.0)DPNEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VAPA 32841.2 7 3 1813.1 113.12 HUMAN 1 8.3488 -2.6486 RYDKKIDSLMNAVGC-p Q5BJF6-4;S124-p RYDKKIDSLMNAVGC 0.92648668397199 0.00184315572268208 -0.02 -0.798333333333333 0.655050494926701 42.9924970484003 -0.02 -0.798333333333334 0.859993067788894 5.02053842308363e-05 -0.184962890215687 -11.5628288570341 Q5BJF6 ODF2 Q5BJF6.4.S124.p_ODF2 Q5BJF6-4_S124sS134s_2_2_124_134 Q5BJF6-4 Q5BJF6|Q5BJF6-4|Q5BJF6-3|Q5BJF6-2|Q5BJF6-7|Q5BJF6-6|Q5BJF6-10|Q5BJF6-5|Q5BJF6-8 Isoform 4 of Outer dense fiber protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31010.31010.4 7.06 7.06 99 2 2 2 0 742.9017 2808.6497 S124s S134s TMT10 121 (K) KIDsLMNAVGCLKsEVK (M) KIDS(1.0)LMNAVGCLKS(1.0)EVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ODF2 96031.2 1 14 853.1 211.96 HUMAN 1 -0.6551 -42.9925 RYEDDGISDDEIEGK-p Q9Y2K7;S28-p RYEDDGISDDEIEGK 0.829567152899261 0.554255874150106 0.0313333333333333 0.0576666666666667 1.56114261643789 3.45301436493446 0.0313333333333333 0.0576666666666667 0.698048725279996 0.451542427581776 0.40926078312088 0.810889871107136 Q9Y2K7 KDM2A Q9Y2K7.S28.p_KDM2A Q9Y2K7_S28s _1_1_28_28 Q9Y2K7 Q9Y2K7|I3VM54|Q9Y2K7-3 Lysine-specific demethylase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16784.16784.2 18.51 18.51 12.543 2 1 1 0 1061.9792 2042.9806 S28s TMT10 22 (R) YEDDGIsDDEIEGK (R) Y(0.0)EDDGIS(0.99)DDEIEGK K:TMT10,s:Phosphorylated S KDM2A 135243.8 23 1 409.1 323.7 HUMAN 1 1.5611 3.453 RYFILPDSLPLDTLL-p P62314;S73-p RYFILPDSLPLDTLL 0.560899556742354 0.0249522643694336 0.0773333333333333 0.3 4.62567379083227 21.8074348344932 0.0773333333333333 0.3 0.344693124639954 0.00659563352092386 1.03499137264806 4.27356469914751 P62314 SNRPD1 P62314.S73.p_SNRPD1 P62314_S73s _1_1_73_73 P62314 P62314|J3QLI9 Small nuclear ribonucleoprotein Sm D1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.37910.37910.3 17.69 17.69 1.17 3 1 1 0 942.516 2745.573 S73s TMT10 67 (R) YFILPDsLPLDTLLVDVEPK (V) Y(0.0)FILPDS(0.99)LPLDT(0.0)LLVDVEPK K:TMT10,s:Phosphorylated S SNRPD1 13281.3 2 1 5614.1 17.69 HUMAN 1 4.6257 21.8074 RYGRPPDSHHSRRGP-p Q01130-2;S98-p RYGRPPDSHHSRRGP 0.39565569868497 0.667537575243595 0.213666666666667 -0.0876666666666667 7.429888258044 2.4018474570674 0.213666666666667 -0.0876666666666667 0.180722062436124 0.575195201440702 1.53607264544614 -0.595988606924865 Q01130 SRSF2 Q01130.2.S98.p_SRSF2 Q01130-2_S98s _1_1_98_98 Q01130-2 Q01130|Q01130-2 Isoform 2 of Serine/arginine-rich splicing factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3055.3055.4 13.21 13.21 2.184 3 1 1 0 405.1924 1537.7821 S98s TMT10 92 (R) YGRPPDsHHSR (R) Y(0.0)GRPPDS(0.99)HHS(0.0)R s:Phosphorylated S SRSF2 24152.5 1 4 1329.1 153.29 HUMAN 1 7.4299 -2.4018 RYGRRKQYPISLVLA-p A0A0D9SF53;Y266-p RYGRRKQYPISLVLA 0.873216810979358 0.542767729972682 -0.0256666666666667 0.117333333333333 1.15179953761217 3.57046371363282 -0.0256666666666667 0.117333333333333 0.767043592205381 0.439494686322504 -0.311533960810654 0.833947615223103 A0A0D9SF53 NotFound A0A0D9SF53.Y266.p_NotFound A0A0D9SF53_Y266y _1_1_266_266 A0A0D9SF53 A0A0D9SF53 ATP-dependent RNA helicase DDX3X GG20160819_MSz_CCLE_T4D7_pY_Injection_02.24974.24974.3 8 8 7.999 3 1 1 0 675.3953 1944.2046 Y266y TMT10 264 (R) KQyPISLVLAPTR (E) KQY(0.99)PIS(0.0)LVLAPT(0.0)R K:TMT10,y:Phosphorylated Y DDX3X 82160.2 1 1 61.1 38.06 HUMAN 1 -1.1518 3.5705 RYHDCQFSEHDWPVH-p Q16659;S363-p RYHDCQFSEHDWPVH 0.148303739525478 0.0173572366667531 -0.251 -0.415 16.7341045053166 24.282496857756 -0.251 -0.415 0.0212123873739544 0.00373035629465007 -3.21044627169515 -4.85848225194476 Q16659 MAPK6 Q16659.S363.p_MAPK6 Q16659_S363s _1_1_363_363 Q16659 Q16659 Mitogen-activated protein kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21926.21926.4 18.41 12.94 8.936 2 1 1 0 931.1512 3641.6342 S363s TMT10 357 (R) YHDCQFsEHDWPVHNNFDIDEVQLDPR (A) Y(0.0)HDCQFS(0.99)EHDWPVHNNFDIDEVQLDPR C:Carbamidomethylation,s:Phosphorylated S MAPK6 83306.9 2 2 2324.1 87.84 HUMAN 1 -16.7341 -24.2825 RYHSRSRSPQAFRGQ-p Q7Z6E9;S772-p RYHSRSRSPQAFRGQ 0.358160899463675 0.0259536015753379 -0.128666666666667 0.349333333333333 8.2853792061208 21.5637277956042 -0.128666666666667 0.349333333333333 0.148409628989229 0.0069763332879066 -1.68463350769223 4.21852430209328 Q7Z6E9 RBBP6 Q7Z6E9.S772.p_RBBP6 Q7Z6E9_S772s _1_1_772_772 Q7Z6E9 Q7Z6E9 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4078.4078.3 11.38 4.61 1.332 2 1 1 0 419.8814 1177.6639 S772s TMT10 770 (R) SRsPQAFR (G) S(0.0)RS(0.99)PQAFR s:Phosphorylated S RBBP6 202473.6 2 6 27.1 935.6 HUMAN 1 -8.2854 21.5637 RYHTRRNSLVNVELW-p Q8IYW5;S70-p RYHTRRNSLVNVELW 0.5704143009409 0.221387183045515 -0.0826666666666667 -0.129333333333333 4.48624078333378 8.62367808406217 -0.0826666666666667 -0.129333333333333 0.355939283326803 0.137287877754431 -1.0090066002823 -1.74262156315751 Q8IYW5 RNF168 Q8IYW5.S70.p_RNF168 Q8IYW5_S70s _1_1_70_70 Q8IYW5 Q8IYW5|F8WD60 E3 ubiquitin-protein ligase RNF168 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31783.31783.3 15.1 15.1 10.47 2 1 1 0 784.4485 2271.3589 S70s TMT10 68 (R) RNsLVNVELWTIIQK (H) RNS(0.99)LVNVELWT(0.0)IIQK K:TMT10,s:Phosphorylated S RNF168 66159.9 1 1 1172.1 170.1 HUMAN 1 -4.4862 -8.6237 RYIVPMLTVDGKRVP-p P14550;T304-p RYIVPMLTVDGKRVP 0.194002306690035 0.0036981515606232 -0.282666666666667 0.852333333333333 13.8922335403244 36.0863100896594 -0.282666666666667 0.852333333333334 0.0408109445065561 0.000246245890257486 -2.67315363890676 8.50285091783168 P14550 AKR1A1 P14550.T304.p_AKR1A1 P14550_T304t _1_1_304_304 P14550 P14550 Alcohol dehydrogenase [NADP(+)] HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29281.29281.3 13.3 10.84 13.3 2 1 1 0 591.9926 1693.9963 T304t TMT10 298 (R) YIVPMLtVDGK (R) Y(0.0)IVPMLT(0.99)VDGK K:TMT10,t:Phosphorylated T AKR1A1 36914.7 1 4 4017.1 39.05 HUMAN 1 -13.8922 36.0863 RYKSYSPYDMLESIR-p P07355-2;Y256-p RYKSYSPYDMLESIR 0.151240834577384 0.0103832756361471 -0.257333333333333 0.412333333333333 16.524857902878 27.8461771777914 -0.257333333333333 0.412333333333333 0.022259438744183 0.00164203451734816 -3.16962849693053 5.79433088904215 P07355 ANXA2 P07355.2.Y256.p_ANXA2 P07355-2_Y256y _1_1_256_256 P07355-2 P07355-2|A6NMY6 Isoform 2 of Annexin A2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.28477.28847.3 20.06 20.06 2.163 5 1 1 0 709.6926 2047.0934 Y256y TMT10 252 (K) SYSPyDMLESIRK (E) S(0.0)Y(0.0)S(0.0)PY(0.99)DMLES(0.0)IRK K:TMT10,y:Phosphorylated Y ANXA2 40695.7 4 3 8.1 109.57 HUMAN 1 -16.5249 27.8462 RYLEEDNSDESDAEG-p Q9H1C4;S547-p RYLEEDNSDESDAEG 0.744043857023488 0.70000272694535 -0.046 -0.0396666666666666 2.43768232583217 2.12982593338181 -0.046 -0.0396666666666666 0.570468629745488 0.612374935416297 -0.603687408770615 -0.5373008589151 Q9H1C4 UNC93B1 Q9H1C4.S547.p_UNC93B1 Q9H1C4_S547sS550s_2_2_547_550 Q9H1C4 Q9H1C4 Protein unc-93 homolog B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16057.16263.5 27.92 25.9 6.919 3 2 2 0 899.3776 4332.9239 S547s S550s TMT10 541 (R) YLEEDNsDEsDAEGEHGDGAEEEAPPAGPRPGPEPAGLGR (R) Y(0.0)LEEDNS(0.99)DES(0.99)DAEGEHGDGAEEEAPPAGPRPGPEPAGLGR s:Phosphorylated S UNC93B1 66972.3 8 2 3530.1 48.94 HUMAN 1 -2.4377 -2.1298 RYLERGESIEPLDPS-p P21860;S686-p RYLERGESIEPLDPS 0.116071900024829 0.00390579112306504 0.280666666666667 0.613666666666667 19.4684696428422 35.5471485782934 0.280483758075862 0.613666666666667 0.0113019409977571 0.000278795103644652 3.76579537629061 8.2978348361567 P21860 ERBB3 P21860.S686.p_ERBB3 P21860_S686s _1_1_686_686 P21860 P21860|P21860-4|B4DGQ7|P21860-5 Receptor tyrosine-protein kinase erbB-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18487.18487.2 15.23 7.98 3.031 3 1 1 0 1200.6079 2320.2437 S686s TMT10 680 (R) YLERGEsIEPLDPSEK (A) Y(0.0)LERGES(0.99)IEPLDPS(0.0)EK K:TMT10,s:Phosphorylated S ERBB3 151518.9 7 1 1255.1 161.59 HUMAN 1 19.4685 35.5471 RYLSVPPSPNISTSE-p Q9BTC0;S1030-p RYLSVPPSPNISTSE 0.884092624795392 0.0747004775417928 0.0213333333333333 0.217666666666667 1.05525318083473 14.9516579926847 0.0213333333333333 0.217666666666667 0.784286395972577 0.0319767411042857 0.287681252946819 2.86752570974858 Q9BTC0 DIDO1 Q9BTC0.S1030.p_DIDO1 Q9BTC0_S1030s _1_1_1030_1030 Q9BTC0 Q9BTC0|Q9BTC0-1 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18714.19190.3 14.51 14.51 4.179 7 1 1 0 681.6713 1963.0334 S1030s TMT10 1024 (R) YLSVPPsPNISTSESR (S) Y(0.0)LS(0.0)VPPS(0.99)PNIS(0.0)T(0.0)S(0.0)ES(0.0)R s:Phosphorylated S DIDO1 245579.9 18 12 153.1 505.54 HUMAN 1 1.0553 14.9517 RYMEDSTYYKASKGK-p E7ESA6;Y620-p RYMEDSTYYKASKGK 0.166624001871184 0.896690461516835 0.276333333333333 0.0163333333333333 15.5601629820084 0.664786203850382 0.276333333333333 0.0163333333333333 0.0277960895265303 0.858067354951022 2.98418533651919 0.187524450336123 E7ESA6 NotFound E7ESA6.Y620.p_NotFound E7ESA6_Y620y _1_1_620_620 E7ESA6 E7ESA6|Q05397-5|Q05397-7|Q05397-2|E9PEI4|Q05397-3|Q05397-4 Focal adhesion kinase 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.16696.16779.3 14.85 9.56 2.559 5 1 1 0 579.9338 1657.8184 Y620y TMT10 614 (R) YMEDSTyYK (A) Y(0.0)MEDS(0.0)T(0.0)Y(0.99)Y(0.0)K K:TMT10,y:Phosphorylated Y PTK2 124992.4 5 3 52.1 42.66 HUMAN 1 15.5602 0.6648 RYPEDKITPENLPQI-p A8MXP9;T134-p RYPEDKITPENLPQI 0.706330237322343 0.719543801337322 -0.0513333333333333 0.0403333333333333 2.83907007318676 1.96892151001522 -0.0513333333333333 0.0403333333333334 0.520107351849875 0.635488724124211 -0.687531677206573 0.501850497545535 A8MXP9 NotFound A8MXP9.T134.p_NotFound A8MXP9_T134t _1_1_134_134 A8MXP9 A8MXP9|P43243|D6REM6 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35180.35180.5 16.28 16.28 2.387 3 1 1 0 770.4302 3768.1402 T134t TMT10 121 (R) DLDELSRYPEDKItPENLPQILLQLK (R) DLDELS(0.0)RY(0.0)PEDKIT(0.99)PENLPQILLQLK K:TMT10,t:Phosphorylated T MATR3 100478.9 3 9 92.1 615.57 HUMAN 1 -2.8391 1.9689 RYPEGYRTLPRNSKT-p Q9HAU0-6;T466-p RYPEGYRTLPRNSKT 0.775124418170112 0.581775966742634 0.0413333333333333 0.0706666666666667 2.11925417275691 3.175198514465 0.0413333333333333 0.0706666666666667 0.613867417448821 0.481371250188399 0.535052707753901 0.755668222742054 Q9HAU0 PLEKHA5 Q9HAU0.6.T466.p_PLEKHA5 Q9HAU0-6_T466t _1_1_466_466 Q9HAU0-6 Q9HAU0-6|Q9HAU0-4|Q9HAU0-2|Q9HAU0-8|Q9HAU0-5|A0JP02|Q9HAU0-3 Isoform 6 of Pleckstrin homology domain-containing family A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10465.10465.3 12.44 4.3 7.446 3 1 1 0 520.9303 1480.811 T466t TMT10 460 (R) YPEGYRtLPR (N) Y(0.0)PEGY(0.0)RT(0.99)LPR t:Phosphorylated T PLEKHA5 147692.6 4 7 374.1 338.83 HUMAN 1 2.1193 3.1752 RYPRKRNSLIELPDD-p Q8IWV7;S1593-p RYPRKRNSLIELPDD 0.900356606703368 0.0830859537469911 0.0203333333333333 0.189333333333333 0.892924176628266 14.3056789303233 0.0203333333333333 0.189333333333333 0.814155914775712 0.0371049718947506 0.246799631291557 2.74752441253055 Q8IWV7 UBR1 Q8IWV7.S1593.p_UBR1 Q8IWV7_S1593s _1_1_1593_1593 Q8IWV7 Q8IWV7 E3 ubiquitin-protein ligase UBR1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28424.28424.4 26.52 26.52 10.827 4 1 1 0 740.111 2877.4515 S1593s TMT10 1591 (K) RNsLIELPDDYSCLLNQASHFR (C) RNS(0.99)LIELPDDY(0.0)S(0.0)CLLNQAS(0.0)HFR C:Carbamidomethylation,s:Phosphorylated S UBR1 203573.2 5 3 1745.1 118.06 HUMAN 1 0.8929 14.3057 RYPSSISSSPQKDLT-p Q14157-5;S608-p RYPSSISSSPQKDLT 0.373935912464191 0.0158781727748385 0.145333333333333 -0.365333333333333 7.90930593171844 24.8638408850599 0.145333333333333 -0.365333333333333 0.161833865197587 0.00326299126730835 1.61942358201726 -5.00317400807646 Q14157 UBAP2L Q14157.5.S608.p_UBAP2L Q14157-5_S608sS609s_2_2_608_609 Q14157-5 Q14157-4|Q14157-5|F8W726|Q14157-3|Q14157-1 Isoform 5 of Ubiquitin-associated protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14564.14564.4 10.37 10.37 1.132 7 2 2 0 710.8698 2680.5237 S608s S609s TMT10 601 (R) RYPSSISssPQKDLTQAK (N) RY(0.0)PS(0.0)S(0.0)IS(0.0)S(0.99)S(0.99)PQKDLT(0.0)QAK K:TMT10,s:Phosphorylated S UBAP2L 116866.1 6 25 189.1 467.5 HUMAN 1 7.9093 -24.8638 RYQTRRASQGLLSSI-p Q5UIP0;S1542-p RYQTRRASQGLLSSI 0.0955024150221834 0.652392067434461 -0.336 0.0716666666666667 21.6323182321477 2.53309544572387 -0.336 0.0716666666666667 0.00686701785778682 0.558072285409936 -4.23835249816089 0.623791446065404 Q5UIP0 RIF1 Q5UIP0.S1542.p_RIF1 Q5UIP0_S1542s _1_1_1542_1542 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18257.18257.3 20.41 20.41 5.197 7 1 1 0 911.7882 2653.3681 S1542s TMT10 1540 (R) RAsQGLLSSIENSESDSSEAK (E) RAS(0.99)QGLLS(0.0)S(0.0)IENS(0.0)ES(0.0)DS(0.0)S(0.0)EAK K:TMT10,s:Phosphorylated S RIF1 276628.8 2 17 29.1 922.06 HUMAN 1 -21.6323 2.5331 RYRCLQCSDMDLCKT-p O43149;S1801-p RYRCLQCSDMDLCKT 0.2867979339798 0.215814877971722 0.189666666666667 0.176 10.2361223771916 8.76392600995923 0.189666666666667 0.176 0.0947082391837422 0.132925223437575 2.02276449304009 1.7668807684296 O43149 ZZEF1 O43149.S1801.p_ZZEF1 O43149_S1801s _1_1_1801_1801 O43149 O43149|O43149-2 Zinc finger ZZ-type and EF-hand domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17369.17369.3 10.49 10.49 99 1 1 1 0 656.6226 1887.8837 S1801s TMT10 1797 (R) CLQCsDMDLCK (T) CLQCS(1.0)DMDLCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZZEF1 335976 2 8 1481.1 138.54 HUMAN 1 10.2361 8.7639 RYRDMRDSRDPMYRR-p Q9HCD5;S116-p RYRDMRDSRDPMYRR 0.189064200656008 0.0849545450792066 0.211666666666667 0.204333333333333 14.1638420105975 14.172816817398 0.211666666666667 0.204333333333333 0.0383367946819543 0.0382576525157973 2.72305003783748 2.72304546403879 Q9HCD5 NCOA5 Q9HCD5.S116.p_NCOA5 Q9HCD5_S116s _1_1_116_116 Q9HCD5 Q9HCD5 Nuclear receptor coactivator 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4600.4600.3 11.81 11.81 11.811 2 1 1 0 507.8716 1441.6311 S116s Hydrogen 112 (R) DMRDsRDPMYR (R) DMRDS(0.99)RDPMY(0.0)R s:Phosphorylated S NCOA5 65763.5 3 9 426.1 319.02 HUMAN 1 14.1638 14.1728 RYREPPPTPPGYLGI-p Q8TEU7;T1507-p RYREPPPTPPGYLGI 0.95578545369103 0.0305385015304316 0.00933333333333332 -0.536333333333333 0.385254204787225 20.4745251889331 0.00933333333333333 -0.536333333333333 0.915112693591285 0.0089649419366459 0.111667014357252 -3.97770143987203 Q8TEU7 RAPGEF6 Q8TEU7.T1507.p_RAPGEF6 Q8TEU7_T1507t _1_1_1507_1507 Q8TEU7 E9PCH4|Q8TEU7-4 Rap guanine nucleotide exchange factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28813.28813.4 13.72 13.72 6.188 4 1 1 0 681.372 2642.4958 T1507t TMT10 1501 (R) YREPPPtPPGYLGISLADLK (E) Y(0.0)REPPPT(0.99)PPGY(0.0)LGIS(0.0)LADLK K:TMT10,t:Phosphorylated T RAPGEF6 180960.1 2 17 795.1 224.05 HUMAN 1 0.3853 -20.4745 RYRERRDSDTYRCEE-p P49761;S215-p RYRERRDSDTYRCEE 0.243014371525134 0.873268242874909 0.198 0.0346666666666667 11.7528513545627 0.828930719085366 0.198 0.0346666666666667 0.0667905261286415 0.826241354270301 2.28857250563771 0.230377108062406 P49761 CLK3 P49761.S215.p_CLK3 P49761_S215s _1_1_215_215 P49761 P49761|P49761-1|P49761-3|P49761-2 Dual specificity protein kinase CLK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3898.3898.3 7.52 6.26 1.404 3 1 1 0 407.8537 1141.5799 S215s TMT10 213 (R) RDsDTYR (C) RDS(0.99)DT(0.0)Y(0.0)R s:Phosphorylated S CLK3 74312.5 2 2 2160.1 95.02 HUMAN 1 11.7529 0.8289 RYRKKGDSPERHGYK-p Q9Y4E5-4;S551-p RYRKKGDSPERHGYK 0.0359965247863966 0.857443441311734 -0.565 -0.0376666666666666 33.6063635165265 0.941192955896036 -0.565 -0.0376666666666666 0.000435876694109579 0.805157243589044 -7.60896883258571 -0.259036229740405 Q9Y4E5 ZNF451 Q9Y4E5.4.S551.p_ZNF451 Q9Y4E5-4_S551s _1_1_551_551 Q9Y4E5-4 Q9Y4E5-4 Isoform 3 of E3 SUMO-protein ligase ZNF451 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.4106.4106.4 8.63 5.24 8.627 2 1 1 0 539.5366 2075.1601 S551s TMT10 548 (K) KGDsPERHGYKN (-) KGDS(0.99)PERHGY(0.0)KN K:TMT10,s:Phosphorylated S ZNF451 63590.1 3 2 3684.1 45.43 HUMAN 1 -33.6064 -0.9412 RYRQRSPSPAPAPAP-p Q9H7N4;S500-p RYRQRSPSPAPAPAP 0.805134921082359 0.250908284027077 0.0443333333333333 0.111666666666667 1.81493369203304 7.91085176252924 0.0443333333333333 0.111666666666667 0.658425482689545 0.161776272189084 0.467416211421061 1.61918467583602 Q9H7N4 SCAF1 Q9H7N4.S500.p_SCAF1 Q9H7N4_S498sS500s_2_2_498_500 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10443.10443.3 23.29 23.29 23.294 3 2 2 0 704.3209 1968.041 Q496q S498s S500s Hydrogen 496 (R) qRsPsPAPAPAPAAAAGPPTR (K) Q(1.0)RS(0.99)PS(0.99)PAPAPAPAAAAGPPT(0.0)R q:Pyroglutamic acid,s:Phosphorylated S SCAF1 139895 21 26 76.1 647.25 HUMAN 1 1.8149 7.9109 RYRRRSPSPYYSRYR-p Q13595;S262-p RYRRRSPSPYYSRYR 0.439923915975208 0.0693312315998734 0.113 0.213666666666667 6.57038426066839 15.4115518634363 0.113 0.213666666666667 0.220273155830962 0.0287637041832427 1.38558117571477 2.95400753856541 Q13595 TRA2A Q13595.S262.p_TRA2A Q13595_S262s _1_1_262_262 Q13595 P62995|Q13595|P62995-3|Q13595-3|Q13595-4 Transformer-2 protein homolog alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4534.4534.2 9.41 6.25 9.409 5 1 1 0 711.3422 1341.7113 S262s TMT10 259 (R) RSPsPYYSR (Y) RS(0.0)PS(0.99)PY(0.0)Y(0.0)S(0.0)R s:Phosphorylated S TRA2A 32745.1 2 119 8.2 1346.57 HUMAN 1 6.5704 15.4116 RYSEEGLSPSKRRRL-p F8VU39;S1781-p RYSEEGLSPSKRRRL 0.0520154613962689 0.000952253650599092 -0.476333333333333 -1.446 27.9056046918931 56.0268165771335 -0.476333333333333 -1.446 0.00161971845596817 2.49642396067354e-06 -5.81935685179705 -20.3462925747256 F8VU39 BAZ2A F8VU39.S1781.p_BAZ2A F8VU39_S1781s _1_1_1781_1781 F8VU39 Q9UIF9|F8VU39|Q9UIF9-3|Q9UIF9-2|J3KPG5 Bromodomain adjacent to zinc finger domain protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12176.12176.2 14.2 10.25 1.703 4 1 1 0 817.9071 1554.8416 S1781s TMT10 1775 (R) YSEEGLsPSK (R) Y(0.0)S(0.0)EEGLS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S BAZ2A 212873.4 7 16 471.1 302.34 HUMAN 1 -27.9056 -56.0268 RYSEPPGSPERAALE-p Q8IWT3;S930-p RYSEPPGSPERAALE 0.782152828295493 0.386485804512897 0.0453333333333333 0.0866666666666667 2.04876182377746 5.48855107515207 0.0453333333333334 0.0866666666666667 0.623912688017002 0.282582258915772 0.51957381881626 1.19262070053509 Q8IWT3 CUL9 Q8IWT3.S930.p_CUL9 Q8IWT3_S930s _1_1_930_930 Q8IWT3 Q8IWT3|E9PEZ1|Q8IWT3-3 Cullin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26463.26463.3 15.84 13.33 1.745 5 1 1 0 1177.2643 3449.8114 S930s TMT10 924 (R) YSEPPGsPERAALETPIIQGQDGSPELLIR (S) Y(0.0)S(0.0)EPPGS(0.99)PERAALET(0.0)PIIQGQDGS(0.0)PELLIR s:Phosphorylated S CUL9 285617.3 3 4 1190.1 168.21 HUMAN 1 2.0488 5.4886 RYSHSGSSSPDTKVK-p Q9UQ35;S973-p RYSHSGSSSPDTKVK 0.0461335186156422 0.0579257352109434 0.5705 0.282 29.6703702012873 16.4802452350891 0.5705 0.282 0.00107885475457685 0.0224892761100675 6.33245653705789 3.15863874431912 Q9UQ35 SRRM2 Q9UQ35.S973.p_SRRM2 Q9UQ35_S973sS974s_2_2_973_974 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5917.6156.3 13.91 13.91 1.239 7 2 2 0 624.2735 1710.8699 S973s S974s TMT10 967 (R) YSHSGSssPDTK (V) Y(0.0)S(0.0)HS(0.0)GS(0.0)S(0.99)S(0.99)PDT(0.0)K K:TMT10,s:Phosphorylated S SRRM2 300351.7 9 196 2.1 3310.34 HUMAN 2 29.6704 16.4802 RYSHSYLSDSDTEAK-p Q92614;S2041-p RYSHSYLSDSDTEAK 0.272925101260209 0.0584042510352364 -0.216666666666667 0.246 10.6805942893408 16.4320102528339 -0.216666666666667 0.246 0.0854949713409036 0.0227404458231999 -2.10024170293321 3.14928639056698 Q92614 MYO18A Q92614.S2041.p_MYO18A Q92614_S2041s _1_1_2041_2041 Q92614 Q92614|Q92614-4|A0A0D9SFK2|Q92614-3|Q92614-2|Q92614-5 Unconventional myosin-XVIIIa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10994.10994.3 19.76 19.76 1.28 7 1 1 0 714.3346 2061.0177 S2041s TMT10 2035 (R) YSHSYLsDSDTEAK (L) Y(0.0)S(0.0)HS(0.0)Y(0.0)LS(0.99)DS(0.0)DT(0.0)EAK K:TMT10,s:Phosphorylated S MYO18A 234309.1 5 14 783.1 225.59 HUMAN 1 -10.6806 16.432 RYSPSQNSPIHHIPS-p Q9NYF8;S290-p RYSPSQNSPIHHIPS 0.269424134699647 0.032325080935548 0.165666666666667 0.285666666666667 10.7967640093646 20.1115768666804 0.165666666666667 0.285666666666667 0.0832383761202204 0.00974635695942592 2.12054093970094 3.89926227174804 Q9NYF8 BCLAF1 Q9NYF8.S290.p_BCLAF1 Q9NYF8_S290s _1_1_290_290 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|Q9NYF8-4|A0A1W2PQ43|E9PJA7 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7768.7768.4 16.25 16.25 1.403 5 1 1 0 508.0024 1949.0191 S290s TMT10 284 (R) YSPSQNsPIHHIPSR (R) Y(0.0)S(0.0)PS(0.0)QNS(0.99)PIHHIPS(0.0)R s:Phosphorylated S BCLAF1 106234.3 6 11 10.1 1293.04 HUMAN 1 10.7968 20.1116 RYTAGSASPTPTFKT-p Q2LD37;S2603-p RYTAGSASPTPTFKT 0.950466896477293 0.27702704206942 0.0113333333333333 0.114333333333333 0.434971802460608 7.34474614808577 0.0113333333333333 0.114333333333333 0.904696311661951 0.184300021206589 0.125450119251074 1.52079331043249 Q2LD37 KIAA1109 Q2LD37.S2603.p_KIAA1109 Q2LD37_S2603s _1_1_2603_2603 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7|Q2LD37-6|Q2LD37-2 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15674.15674.2 16.45 16.45 1.469 6 1 1 0 933.4745 1785.9787 S2603s TMT10 2597 (R) YTAGSAsPTPTFK (T) Y(0.0)T(0.0)AGS(0.0)AS(0.99)PT(0.0)PT(0.0)FK K:TMT10,s:Phosphorylated S KIAA1109 559693.9 5 15 143.1 520.8 HUMAN 1 0.435 7.3447 RYVGFGNTPPPQKKE-p Q8N6T3;T189-p RYVGFGNTPPPQKKE 0.3628557333861 0.0120558086435679 -0.209 -0.408 8.17940208581892 26.8002863057703 -0.209 -0.408 0.152075688526332 0.00208915839992579 -1.66626852410079 -5.50713830182277 Q8N6T3 ARFGAP1 Q8N6T3.T189.p_ARFGAP1 Q8N6T3_T189t _1_1_189_189 Q8N6T3 Q8N6T3-2|Q8N6T3-3|Q8N6T3-5|F8VWH9|Q8N6T3-4 ADP-ribosylation factor GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14868.14868.3 15.68 15.68 7.944 2 1 1 0 734.0763 2120.2471 T189t TMT10 183 (R) YVGFGNtPPPQKK (E) Y(0.0)VGFGNT(0.99)PPPQKK K:TMT10,t:Phosphorylated T ARFGAP1 45009.4 6 6 243.1 413.25 HUMAN 1 -8.1794 -26.8003 RYVTKPNSDDEDDGD-p P51784;S648-p RYVTKPNSDDEDDGD 0.271325573639408 0.970594517996063 -0.702333333333333 0.0539999999999999 10.7380420319484 0.184001251459174 -0.702333333333333 0.0539999999999997 0.0843715051517683 0.958517121480152 -2.11027722259688 0.0550671981305802 P51784 USP11 P51784.S648.p_USP11 P51784_S648s _1_1_648_648 P51784 P51784|G5E9A6 Ubiquitin carboxyl-terminal hydrolase 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10813.10813.3 17.32 17.32 5.552 3 1 1 0 865.4076 2514.2451 S648s TMT10 642 (R) YVTKPNsDDEDDGDEK (E) Y(0.0)VT(0.0)KPNS(0.99)DDEDDGDEK K:TMT10,s:Phosphorylated S USP11 111012.7 1 2 2240.1 92.03 HUMAN 1 -10.738 0.184 RYYRLLQSPLCAGCS-p Q9UJX6;S218-p RYYRLLQSPLCAGCS 0.30994340307923 0.645414619282595 -0.165333333333333 -0.0436666666666666 9.51137920729691 2.59270167164232 -0.165333333333333 -0.0436666666666666 0.11190824353023 0.5504651549202 -1.89693043760479 -0.636315097501756 Q9UJX6 ANAPC2 Q9UJX6.S218.p_ANAPC2 Q9UJX6_S218s _1_1_218_218 Q9UJX6 Q9UJX6|Q9UJX6-2 Anaphase-promoting complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19924.19924.3 15.25 15.25 8.533 3 1 1 0 692.0086 1994.0451 S218s TMT10 215 (R) LLQsPLCAGCSSDK (Q) LLQS(0.99)PLCAGCS(0.0)S(0.0)DK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANAPC2 94682.2 2 1 1208.1 166.75 HUMAN 1 -9.5114 -2.5927 SAAAGEMSDEEIKKT-p Q7Z569;S32-p SAAAGEMSDEEIKKT 0.522286712615586 0.984984833791561 -0.134 0.00333333333333335 5.21678060943833 0.09744938955966 -0.134 0.00333333333333334 0.300830550930248 0.977811320706808 -1.14363998822691 0.0291191776159784 Q7Z569 BRAP Q7Z569.S32.p_BRAP Q7Z569_S32s _1_1_32_32 Q7Z569 Q7Z569 BRCA1-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26448.26448.5 24.43 24.43 2.317 3 1 1 0 757.7887 3704.9449 S32s TMT10 10 (R) LELAEHSPVPAGFGFSAAAGEMsDEEIKK (T) LELAEHS(0.0)PVPAGFGFS(0.0)AAAGEMS(0.99)DEEIKK K:TMT10,s:Phosphorylated S BRAP 68615.7 1 2 1332.1 153 HUMAN 1 -5.2168 0.0974 SAAASPGSPPPGRAR-p Q86UX6;S18-p SAAASPGSPPPGRAR 0.771638354290043 0.0843634491930799 -0.0426666666666667 0.222 2.15503978126296 14.2164043210818 -0.0426666666666667 0.222 0.608829968868981 0.0378756040573867 -0.542869389461506 2.73106880754344 Q86UX6 STK32C Q86UX6.S18.p_STK32C Q86UX6_S18s _1_1_18_18 Q86UX6 Q86UX6 Serine/threonine-protein kinase 32C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3736.3736.3 19.51 19.51 3.682 4 1 1 0 587.6266 1680.8979 S18s TMT10 8 (R) RGSSAAASPGsPPPGR (A) RGS(0.0)S(0.0)AAAS(0.0)PGS(0.99)PPPGR s:Phosphorylated S STK32C 55392.8 5 1 3966.1 40.07 HUMAN 1 -2.155 14.2164 SAAEEKYSQKEDKYE-p P06753-2;S179-p SAAEEKYSQKEDKYE 0.395179917614244 0.0601189258219044 0.164 0.388666666666667 7.44223001525858 16.265685068045 0.164 0.388666666666667 0.180209216498223 0.0236282465130495 1.53822250283978 3.11712421233546 P06753 TPM3 P06753.2.S179.p_TPM3 P06753-2_S179s _1_1_179_179 P06753-2 P06753-2|P06753-6|P06753-3|Q5HYB6|Q5VU61 Isoform 2 of Tropomyosin alpha-3 chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17250.17250.4 13.39 13.39 3.199 4 1 1 0 951.5025 3723.0172 S179s TMT10 170 (K) CLSAAEEKYsQKEDKYEEEIK (I) CLS(0.0)AAEEKY(0.0)S(0.99)QKEDKY(0.0)EEEIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TPM3 29260.4 2 3 2934.1 65.55 HUMAN 1 7.4422 16.2657 SAAEMYGSSFDLDYD-p P07910-2;S107-p SAAEMYGSSFDLDYD 0.592062917051146 0.930431025891797 0.076 0.00966666666666669 4.19381146847172 0.441897652800052 0.076 0.00966666666666669 0.380731537953912 0.903254709700259 0.954000239946258 0.127348002423751 P07910 HNRNPC P07910.2.S107.p_HNRNPC P07910-2_S107s _1_1_107_107 P07910-2 P07910-2|G3V4C1|B2R5W2|B4DY08|P07910-4 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24024.24024.3 13.98 14.98 1.148 7 1 1 0 965.3839 2814.1624 S107s Hydrogen 100 (R) SAAEMYGsSFDLDYDFQRDYYDR (M) S(0.0)AAEMY(0.0)GS(0.99)S(0.0)FDLDY(0.0)DFQRDY(0.0)Y(0.0)DR s:Phosphorylated S HNRNPC 32394 13 12 261.1 397.39 HUMAN 1 4.1938 0.4419 SAAKGQKSPGALETP-p Q9Y2D5-4;S624-p SAAKGQKSPGALETP 0.489574336508487 0.0439711539603473 -0.111 -0.270666666666667 5.71781389249728 18.1724634939827 -0.111 -0.270666666666667 0.268051727687195 0.0152318849456873 -1.23412686459303 -3.49435766170543 Q9Y2D5 AKAP2 Q9Y2D5.4.S624.p_AKAP2 Q9Y2D5-4_S624s _1_1_624_624 Q9Y2D5-4 Q9Y2D5-4|Q9Y2D5-6|Q9Y2D5-7|Q9Y2D5-5 Isoform 3 of A-kinase anchor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10861.10861.3 20.31 20.31 1.288 6 1 1 0 1032.869 3016.6267 S624s TMT10 621 (K) GQKsPGALETPSAAGSQGNTASQGK (E) GQKS(0.99)PGALET(0.0)PS(0.0)AAGS(0.0)QGNT(0.0)AS(0.0)QGK K:TMT10,s:Phosphorylated S AKAP2 122582.3 3 11 779.1 226.39 HUMAN 1 -5.7178 -18.1725 SAAPVEGSPDRKQSR-p A0A1B0GTL5;S1209-p SAAPVEGSPDRKQSR 0.148266672319898 0.826156583925135 -0.332 0.0333333333333334 16.8124967899949 1.15992116528475 -0.332 0.0333333333333334 0.0208329283881574 0.76561050442569 -3.22579509139547 0.313493934212762 A0A1B0GTL5 NotFound A0A1B0GTL5.S1209.p_NotFound A0A1B0GTL5_S1209s _1_1_1209_1209 A0A1B0GTL5 A0A1B0GTL5|Q9BXF6 Rab11 family-interacting protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12822.12822.3 9.47 9.47 3.94 2 1 1 0 654.6876 1882.0798 S1209s TMT10 1200 (K) PLSAAPVEGsPDRK (Q) PLS(0.0)AAPVEGS(0.99)PDRK K:TMT10,s:Phosphorylated S RAB11FIP5 139038.8 4 18 714.1 238.09 HUMAN 1 -16.8125 1.1599 SADCSVPSPALDKTS-p O43439-4;S587-p SADCSVPSPALDKTS 0.991368220615931 0.107245945597716 0.00266666666666666 0.187 0.0788673650215929 12.8098276031869 0.00266666666666665 0.187 0.982004015136578 0.0523621221753885 0.0236177228053377 2.47552015506853 O43439 CBFA2T2 O43439.4.S587.p_CBFA2T2 O43439-4_S587s _1_1_587_587 O43439-4 O43439-4|O43439-5|O43439-2|Q68DC6 Isoform 4 of Protein CBFA2T2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14374.14374.2 14.16 12.32 3.364 3 1 1 0 942.9622 1804.9515 S587s TMT10 580 (R) SADCSVPsPALDK (T) S(0.0)ADCS(0.0)VPS(0.99)PALDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CBFA2T2 68762.1 2 6 2492.1 81.27 HUMAN 1 0.0789 12.8098 SADDEELTNDSLTLS-p A0A0U1RRH6;T287-p SADDEELTNDSLTLS 0.793656902930619 0.0235986321445072 0.0476666666666667 0.324166666666667 1.93691312045864 22.1860590588179 0.0476666666666667 0.324166666666667 0.640189708027216 0.006044969223795 0.494785225587414 4.35994557161094 A0A0U1RRH6 NotFound A0A0U1RRH6.T287.p_NotFound A0A0U1RRH6_T287tS290s_2_2_287_290 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17855.17855.2 18.95 18.95 2.454 6 2 2 0 1343.0994 2525.2619 T287t S290s TMT10 279 (R) NSADDEELtNDsLTLSQSK (S) NS(0.0)ADDEELT(0.99)NDS(0.99)LT(0.0)LS(0.0)QS(0.0)K K:TMT10,t:Phosphorylated T,s:Phosphorylated S PHF14 109152.4 9 22 126.1 543.2 HUMAN 2 1.9369 22.1861 SADRKDGYVWSGKKL-p Q8WXH5;Y30-p SADRKDGYVWSGKKL 0.246620451673501 0.0883333005401025 -0.440666666666667 -0.383 11.629453815315 13.9476106167818 -0.440666666666667 -0.383 0.068715485369747 0.0402938660460304 -2.26677716331902 -2.68170333858809 Q8WXH5 SOCS4 Q8WXH5.Y30.p_SOCS4 Q8WXH5_Y30y _1_1_30_30 Q8WXH5 Q8WXH5 Suppressor of cytokine signaling 4 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.17423.17423.2 7.39 7.39 7.392 2 1 1 0 725.3575 1369.7516 Y30y TMT10 28 (K) DGyVWSGK (K) DGY(0.99)VWS(0.0)GK K:TMT10,y:Phosphorylated Y SOCS4 51592.2 1 1 436.1 7.39 HUMAN 1 -11.6295 -13.9476 SADSEEDSDEQDPGQ-p Q8TF30;S799-p SADSEEDSDEQDPGQ 0.665637504889505 0.101587514049587 0.086 0.405 3.30385564595321 13.1231786092961 0.086 0.405 0.467320072507312 0.0487171797653169 0.781481091052687 2.53188200951886 Q8TF30 WHAMM Q8TF30.S799.p_WHAMM Q8TF30_S799s _1_1_799_799 Q8TF30 Q8TF30 WASP homolog-associated protein with actin, membranes and microtubules HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11214.11214.3 14.15 14.15 2.336 3 1 1 0 844.3438 2451.0382 S799s TMT10 790 (K) RVSADSEEDsDEQDPGQWDG (-) RVS(0.0)ADS(0.0)EEDS(0.99)DEQDPGQWDG s:Phosphorylated S WHAMM 91892.7 1 5 3009.1 63.37 HUMAN 1 3.3039 13.1232 SAEDCGVSDSELSFR-p Q969G2;S252-p SAEDCGVSDSELSFR 0.127638476804876 0.0185337296351753 0.385666666666667 -0.400333333333333 18.5327099860131 23.8356039774941 0.385666666666667 -0.400333333333333 0.0140193862559424 0.00413465809263092 3.57088935482232 -4.74921726700108 Q969G2 LHX4 Q969G2.S252.p_LHX4 Q969G2_S252s _1_1_252_252 Q969G2 Q969G2 LIM/homeobox protein Lhx4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24351.24351.4 23.9 23.9 3.023 7 1 1 0 919.9122 3596.6608 S252s TMT10 243 (K) ESSAEDCGVsDSELSFREDQILSELGHTNR (I) ES(0.0)S(0.0)AEDCGVS(0.99)DS(0.0)ELS(0.0)FREDQILS(0.0)ELGHT(0.0)NR C:Carbamidomethylation,s:Phosphorylated S LHX4 43921.6 1 1 3316.1 54.08 HUMAN 1 18.5327 -23.8356 SAEEEVLSSEKQLIK-p A0A0U1RRH6;S91-p SAEEEVLSSEKQLIK 0.930978723493408 0.241928326031268 -0.013 0.135 0.615439806784375 8.11790211674262 -0.013 0.135 0.867872684022255 0.154244535968997 -0.174423764810167 1.65507472682109 A0A0U1RRH6 NotFound A0A0U1RRH6.S91.p_NotFound A0A0U1RRH6_S91s _1_1_91_91 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13485.13485.3 15.8 15.8 1.185 3 1 1 0 620.6371 1779.9376 S91s TMT10 83 (K) NSAEEEVLsSEK (Q) NS(0.0)AEEEVLS(0.99)S(0.0)EK K:TMT10,s:Phosphorylated S PHF14 109152.4 1 3 126.1 543.2 HUMAN 1 -0.6154 8.1179 SAEGSGLSF______-p Q8WV07;S136-p SAEGSGLSF______ 0.336506803863882 0.121974108786039 -0.199 0.172333333333333 8.81824789233069 12.0519895078236 -0.199 0.172333333333333 0.131272939673098 0.0623449167302066 -1.77690126758776 2.3403857512018 Q8WV07 ORAOV1 Q8WV07.S136.p_ORAOV1 Q8WV07_S136s _1_1_136_136 Q8WV07 Q8WV07|F5GWS9 Oral cancer-overexpressed protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25045.25045.2 10.66 10.66 4.691 3 1 1 0 638.8045 1196.636 S136s TMT10 128 (K) ISAEGSGLsF (-) IS(0.0)AEGS(0.0)GLS(0.99)F s:Phosphorylated S ORAOV1 15582.3 1 2 4878.1 25.54 HUMAN 1 -8.8182 12.052 SAEGSHVSGQSNGRD-p Q9H9G7;S832-p SAEGSHVSGQSNGRD 0.167474891729899 0.0847774187878305 0.266333333333333 0.361 15.5078146021565 14.1858964056816 0.266333333333333 0.361 0.0281331615310253 0.0381426057894725 2.9742459334724 2.72545233086145 Q9H9G7 AGO3 Q9H9G7.S832.p_AGO3 Q9H9G7_S825sS829sS832s_3_3_825_832 Q9H9G7 Q9H9G7|Q9H9G7-2 Protein argonaute-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11423.11423.5 8.09 8.09 2.469 5 3 3 0 832.7891 3920.0254 S825s S829s S832s TMT10 816 (R) YHLVDKEHDsAEGsHVsGQSNGRDPQALAK (A) Y(0.0)HLVDKEHDS(0.99)AEGS(0.99)HVS(0.99)GQS(0.0)NGRDPQALAK K:TMT10,s:Phosphorylated S AGO3 98556.6 1 1 7033.1 8.09 HUMAN 1 15.5078 14.1859 SAEILPHTPRLTHFP-p Q8TCT9-2;T356-p SAEILPHTPRLTHFP 0.78776392544686 0.210462230336256 0.049 -0.223333333333333 2.00053344849169 8.9042046648502 0.049 -0.223333333333333 0.630879848083816 0.128700292375181 0.508920173079389 -1.79114341532141 Q8TCT9 HM13 Q8TCT9.2.T356.p_HM13 Q8TCT9-2_T356t _1_1_356_356 Q8TCT9-2 Q8TCT9-2|Q8TCT9-4 Isoform 2 of Minor histocompatibility antigen H13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24378.24378.3 15.95 15.95 1.263 6 1 1 0 897.087 2609.2755 T356t TMT10 338 (K) GEVTEMFSYESSAEILPHtPR (L) GEVT(0.0)EMFS(0.0)Y(0.0)ES(0.0)S(0.0)AEILPHT(0.99)PR t:Phosphorylated T HM13 47109.8 1 2 4029.1 38.89 HUMAN 1 2.0005 -8.9042 SAEKAVDSSSEEIEV-p Q9Y6X4;S635-p SAEKAVDSSSEEIEV 0.824817850402609 0.130628168200247 0.034 0.155666666666667 1.61343853578434 11.6497092258307 0.034 0.155666666666667 0.689693521298287 0.0683957438905964 0.421385166540973 2.26925881957982 Q9Y6X4 FAM169A Q9Y6X4.S635.p_FAM169A Q9Y6X4_S635s _1_1_635_635 Q9Y6X4 Q9Y6X4|D6RB01 Soluble lamin-associated protein of 75 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19566.19799.3 19.21 19.21 1.167 3 1 1 0 808.7344 2344.2194 S635s TMT10 632 (K) AVDsSSEEIEVEVPVVDRR (N) AVDS(0.99)S(0.0)S(0.0)EEIEVEVPVVDRR s:Phosphorylated S FAM169A 75295.8 2 12 731.1 236 HUMAN 1 1.6134 11.6497 SAEKELSSPISPKSL-p E9PGC8;S2257-p SAEKELSSPISPKSL 0.0147380963983692 0.00170546265850223 -0.920666666666667 -1.09133333333333 43.8403121671397 43.975211893634 -0.920666666666667 -1.09133333333333 4.13017813557846e-05 4.00385932899279e-05 -12.0326224775315 -12.0724444782065 E9PGC8 NotFound E9PGC8.S2257.p_NotFound E9PGC8_S2257sS2260s_2_2_2257_2260 E9PGC8 E9PGC8 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16350.16350.2 7.3 3.4 1.126 3 2 2 0 788.3962 1415.851 S2257s S2260s TMT10 2254 (K) ELSsPIsPK (S) ELS(0.0)S(0.99)PIS(0.99)PK K:TMT10,s:Phosphorylated S MAP1A 332906.7 1 53 20.1 1016.98 HUMAN 1 -43.8403 -43.9752 SAEKLLESPGVEAGE-p A0A0G2JHC2;S368-p SAEKLLESPGVEAGE 0.133129641422699 0.135242759288428 -0.257333333333333 0.183333333333333 18.0474037061182 11.4533946745028 -0.257333333333333 0.183333333333333 0.0156768798331267 0.0715583853507458 -3.4718652308031 2.23468411292511 A0A0G2JHC2 NotFound A0A0G2JHC2.S368.p_NotFound A0A0G2JHC2_S368s _1_1_368_368 A0A0G2JHC2 A0A0G2JHC2|Q6NYC8-3 PPP1R18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19185.19185.3 12.9 12.9 99 1 1 1 0 718.3632 2073.1116 S368s TMT10 365 (K) LLEsPGVEAGEGEAEK (E) LLES(1.0)PGVEAGEGEAEK K:TMT10,s:Phosphorylated S PPP1R18 68325.8 1 7 1213.1 166.15 HUMAN 1 -18.0474 11.4534 SAEPIVVSSDEEGPV-p Q9BQF6-5;S377-p SAEPIVVSSDEEGPV 0.207735478203539 0.0646181984401455 0.197 0.211333333333333 13.1684392926994 15.8323421640359 0.197 0.211333333333333 0.048212102446722 0.0261075298722594 2.54146355102393 3.03394801019016 Q9BQF6 SENP7 Q9BQF6.5.S377.p_SENP7 Q9BQF6-5_S377sS378s_2_2_377_378 Q9BQF6-5 Q9BQF6|Q9BQF6-2|J3QT09|Q9BQF6-5|Q9BQF6-4 Isoform 5 of Sentrin-specific protease 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18971.18971.3 20.46 21.08 3.808 4 2 2 0 1192.8912 3416.7334 S377s S378s TMT10 360 (R) GHNEGNQSLISAEPIVVssDEEGPVEHK (S) GHNEGNQS(0.0)LIS(0.0)AEPIVVS(0.99)S(0.99)DEEGPVEHK K:TMT10,s:Phosphorylated S SENP7 113127.1 3 10 1683.1 121.31 HUMAN 1 13.1684 15.8323 SAEPQPASPQPAAAA-p Q9UPG8;S381-p SAEPQPASPQPAAAA 0.62353043003294 0.156058980738877 0.0756666666666667 0.161 3.81188429515332 10.6082855579231 0.0756666666666667 0.158569928722154 0.415730196422178 0.0869303532061203 0.880995909177497 2.08671523210564 Q9UPG8 PLAGL2 Q9UPG8.S381.p_PLAGL2 Q9UPG8_S381s _1_1_381_381 Q9UPG8 Q9UPG8 Zinc finger protein PLAGL2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.38022.38022.4 20.93 18.07 1.894 6 1 1 0 1178.8774 4632.5064 S381s TMT10 357 (K) VEVDSFLAELPGSLSLSSAEPQPAsPQPAAAAALLDEALLAK (S) VEVDS(0.0)FLAELPGS(0.0)LS(0.0)LS(0.0)S(0.0)AEPQPAS(0.99)PQPAAAAALLDEALLAK K:TMT10,s:Phosphorylated S PLAGL2 55609.7 2 1 5294.1 20.93 HUMAN 1 3.8119 10.6083 SAFDNPDYWHSRLFP-p P21860;Y1328-p SAFDNPDYWHSRLFP 0.129755728316385 0.0416872601858746 0.597333333333333 0.362333333333333 18.350147156014 18.4962802670787 0.597333333333333 0.362333333333333 0.0146212763099522 0.0141374790151355 3.53347815974726 3.56039185898983 P21860 ERBB3 P21860.Y1328.p_ERBB3 P21860_Y1328y _1_1_1328_1328 P21860 P21860|P21860-4|P21860-5 Receptor tyrosine-protein kinase erbB-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18276.18276.3 24.42 24.42 4.981 5 1 1 0 807.3529 2340.073 Y1328y TMT10 1315 (R) SLEATDSAFDNPDyWHSR (L) S(0.0)LEAT(0.0)DS(0.0)AFDNPDY(0.99)WHS(0.0)R y:Phosphorylated Y ERBB3 151518.9 1 7 1255.1 161.59 HUMAN 1 18.3501 18.4963 SAFEFLSSA______-p P40925-3;S351-p SAFEFLSSA______ 0.736926628232361 0.0471479098093293 -0.0523333333333333 0.259 2.51164251647892 17.7479948865344 -0.0523333333333333 0.259 0.560835825903131 0.0167957929155545 -0.619347714751331 3.4087012182756 P40925 MDH1 P40925.3.S351.p_MDH1 P40925-3_S351s _1_1_351_351 P40925-3 P40925-3|P40925-2|B9A041|B8ZZ51 Isoform 3 of Malate dehydrogenase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29956.29956.2 12.51 12.51 1.548 3 1 1 0 698.8147 1316.6572 S351s TMT10 343 (K) ESAFEFLSsA (-) ES(0.0)AFEFLS(0.0)S(0.99)A s:Phosphorylated S MDH1 38912.2 2 4 2746.1 71.96 HUMAN 1 -2.5116 17.748 SAFLRSGSVYEPLKS-p Q93100-2;S20-p SAFLRSGSVYEPLKS 0.329350427440409 0.0506644786183798 0.362 -0.424666666666667 9.01615672457421 17.3061277707073 0.362 -0.424666666666667 0.125425062913391 0.0185946163775226 1.81115976867173 -3.32058718280261 Q93100 PHKB Q93100.2.S20.p_PHKB Q93100-2_S20s _1_1_20_20 Q93100-2 Q93100|Q93100-3|Q93100-2|Q93100-4 Isoform 2 of Phosphorylase b kinase regulatory subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15811.15811.3 12.44 8.7 2.127 3 1 1 0 506.606 1437.8354 S20s TMT10 18 (R) SGsVYEPLK (S) S(0.0)GS(0.99)VY(0.0)EPLK K:TMT10,s:Phosphorylated S PHKB 125160.1 1 4 1018.1 188.04 HUMAN 1 9.0162 -17.3061 SAGGRPGSGPQLGTG-p O14908;S232-p SAGGRPGSGPQLGTG 0.887456189668158 0.0190433095105341 -0.0513333333333333 -0.900666666666667 1.01072205623142 23.6593457568656 -0.0513333333333333 -0.900666666666667 0.792369580485675 0.00430591472079394 -0.276565784097034 -4.70658093276969 O14908 GIPC1 O14908.S232.p_GIPC1 O14908_S232s _1_1_232_232 O14908 O14908|O14908-2 PDZ domain-containing protein GIPC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4918.4918.3 14.31 14.31 3.567 3 1 1 0 588.63 1683.9088 S232s TMT10 225 (R) SAGGRPGsGPQLGTGR (G) S(0.0)AGGRPGS(0.99)GPQLGT(0.0)GR s:Phosphorylated S GIPC1 36162.7 2 1 4970.1 24.48 HUMAN 1 -1.0107 -23.6593 SAGKAMDTPKPAVSD-p P46013;T2389-p SAGKAMDTPKPAVSD 0.25567774491366 0.0138524396572908 0.187333333333333 -0.653 11.2581622555327 25.8027106635027 0.187333333333333 -0.653 0.0748486160143437 0.00262862681357688 2.20140040841911 -5.24317431359141 P46013 MKI67 P46013.T2389.p_MKI67 P46013_T2389t _1_1_2389_2389 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11421.11421.4 11.33 11.33 4.45 2 1 1 0 539.7881 2076.1614 T2389t TMT10 2386 (K) AMDtPKPAVSDEK (N) AMDT(0.99)PKPAVS(0.0)DEK K:TMT10,t:Phosphorylated T MKI67 360912.4 3 82 5.1 1918.46 HUMAN 1 11.2582 -25.8027 SAGKAMHTPKPAVGE-p P46013;T1784-p SAGKAMHTPKPAVGE 0.964401735367619 0.0104621656458214 0.00699999999999999 -0.624333333333333 0.304266397151846 27.7865052455167 0.007 -0.624333333333333 0.932337945980189 0.0016647517321746 0.0889277326867584 -5.77764792546791 P46013 MKI67 P46013.T1784.p_MKI67 P46013_T1784t _1_1_1784_1784 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8731.8731.4 16.15 16.15 99 1 1 1 0 541.2972 2082.1985 T1784t TMT10 1781 (K) AMHtPKPAVGEEK (D) AMHT(1.0)PKPAVGEEK K:TMT10,t:Phosphorylated T MKI67 360912.4 3 56 5.1 1918.46 HUMAN 1 0.3043 -27.7865 SAGKAMHTPKPAVSG-p P46013;T1540-p SAGKAMHTPKPAVSG 0.626199485405885 0.00544848158522519 0.0916666666666667 -0.714 3.77593826820993 32.8426229254207 0.0916666666666667 -0.714 0.419185424305 0.000519682039301701 0.874050165764415 -7.33274272810831 P46013 MKI67 P46013.T1540.p_MKI67 P46013_T1540t_1_1_1540_1540 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6184.6184.4 10.97 10.97 10.966 2 1 1 0 534.7929 2040.1879 M1538m T1540t TMT10 1537 (K) AmHtPKPAVSGEK (N) AM(1.0)HT(0.99)PKPAVS(0.0)GEK K:TMT10,m:Oxidized methionine,t:Phosphorylated T MKI67 360912.4 4 48 5.1 1918.46 HUMAN 1 3.7759 -32.8426 SAGKAMHTPKPSVGE-p P46013;T1298-p SAGKAMHTPKPSVGE 0.132882806400642 0.0217672324909033 0.315666666666667 -0.404333333333333 18.0808482553198 22.7215408535806 0.315666666666667 -0.404333333333333 0.0155566175317881 0.00534374732464265 3.47864591059261 -4.48396322958812 P46013 MKI67 P46013.T1298.p_MKI67 P46013_T1298t _1_1_1298_1298 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8422.8422.4 10.74 10.74 10.737 2 1 1 0 545.2957 2098.1934 T1298t TMT10 1295 (K) AMHtPKPSVGEEK (D) AMHT(0.99)PKPS(0.0)VGEEK K:TMT10,t:Phosphorylated T MKI67 360912.4 2 37 5.1 1918.46 HUMAN 1 18.0808 -22.7215 SAGKAMLTPKPAGGD-p P46013;T1176-p SAGKAMLTPKPAGGD 0.538096091598491 0.0233937076168462 0.132 -0.517333333333333 4.97672318528454 22.2508533761897 0.132 -0.517333333333333 0.317927197262274 0.00595545109126601 1.09979076263458 -4.37483559551775 P46013 MKI67 P46013.T1176.p_MKI67 P46013_T1176t _1_1_1176_1176 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13376.13376.3 10.52 10.52 99 1 1 1 0 694.7148 2002.161 T1176t TMT10 1173 (K) AMLtPKPAGGDEK (D) AMLT(1.0)PKPAGGDEK K:TMT10,t:Phosphorylated T MKI67 360912.4 4 30 5.1 1918.46 HUMAN 1 4.9767 -22.2509 SAGNIPLSPLARTPS-p O15021;S1380-p SAGNIPLSPLARTPS 0.306684187031916 0.165000491070934 0.149 0.153 9.61060606512497 10.2897770404128 0.149 0.153 0.109380371350545 0.0935453697556839 1.91413147079796 2.03125427531137 O15021 MAST4 O15021.S1380.p_MAST4 O15021_S1380s _1_1_1380_1380 O15021 O15021|J3QT34|O15021-1|E7EWQ5|O15021-3|O15021-2 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19750.19750.2 9.6 9.6 8.199 2 1 1 0 752.9066 1424.8423 S1380s TMT10 1373 (K) SAGNIPLsPLAR (T) S(0.0)AGNIPLS(0.99)PLAR s:Phosphorylated S MAST4 286597.7 1 7 121.99 549.41 HUMAN 1 9.6106 10.2898 SAGSLSESAVGPVEA-p Q9BSQ5;S185-p SAGSLSESAVGPVEA 0.281285200254826 0.747273331029444 -0.379 0.145333333333333 10.4169052921765 1.74696572679704 -0.379 0.145333333333333 0.0908467658021396 0.66881103071785 -2.05424349063407 0.451956745866347 Q9BSQ5 CCM2 Q9BSQ5.S185.p_CCM2 Q9BSQ5_S185s _1_1_185_185 Q9BSQ5 Q9BSQ5-2|A0A0A0MT72|Q9BSQ5-4 Cerebral cavernous malformations 2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.36473.36473.4 10.25 10.25 2.366 5 1 1 0 829.1737 3233.7162 S185s TMT10 176 (R) GLSAGSLSEsAVGPVEACCLVILAAESK (V) GLS(0.0)AGS(0.0)LS(0.0)ES(0.99)AVGPVEACCLVILAAES(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCM2 49292.3 1 3 2227.1 92.63 HUMAN 1 -10.4169 1.747 SAGSVRCSPPETLAS-p O94915;S889-p SAGSVRCSPPETLAS 0.156870667579318 0.176305251274796 0.238 0.171 16.1396285963606 9.91221299540948 0.238 0.171 0.0243241201725383 0.102041938526105 3.09504653392705 1.96567576081714 O94915 FRYL O94915.S889.p_FRYL O94915_S889s _1_1_889_889 O94915 O94915|F2Z2S2 Protein furry homolog-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18871.18871.3 16.18 16.18 1.252 8 1 1 0 884.0861 2570.2696 S889s TMT10 888 (R) CsPPETLASTPDSGYSIDSK (I) CS(0.99)PPET(0.0)LAS(0.0)T(0.0)PDS(0.0)GY(0.0)S(0.0)IDS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FRYL 342387.4 1 5 526.1 282.44 HUMAN 1 16.1396 9.9122 SAGVAPESFEYIEAH-p P49327;S286-p SAGVAPESFEYIEAH 0.521613480576598 0.630308437349205 0.113666666666667 0.0703333333333334 5.22610233306185 2.72527761415378 0.113666666666667 0.0703333333333334 0.30018553885149 0.533915143014313 1.14533576780977 0.663950114334709 P49327 FASN P49327.S286.p_FASN P49327_S286s _1_1_286_286 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21508.21508.4 20.86 20.86 2.516 7 1 1 0 770.8835 3000.5355 S286s TMT10 275 (R) SLYQSAGVAPEsFEYIEAHGTGTK (V) S(0.0)LY(0.0)QS(0.0)AGVAPES(0.99)FEY(0.0)IEAHGT(0.0)GT(0.0)K K:TMT10,s:Phosphorylated S FASN 276046.1 1 5 175.1 481.87 HUMAN 1 5.2261 2.7253 SAHKKKDSPEPQVKM-p Q96JQ2;S619-p SAHKKKDSPEPQVKM 0.578214566607126 0.768942344155265 0.0786666666666667 0.0303333333333334 4.37564456965991 1.57742223741444 0.0786666666666667 0.0303333333333334 0.365119932991176 0.695436972956936 0.988287210533131 0.412998749777114 Q96JQ2 CLMN Q96JQ2.S619.p_CLMN Q96JQ2_S619s _1_1_619_619 Q96JQ2 Q96JQ2 Calmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5678.5678.3 9.47 9.47 99 1 1 1 0 641.7025 1843.1256 S619s Hydrogen 616 (K) KKDsPEPQVK (M) KKDS(1.0)PEPQVK K:TMT10-Lys-Only,s:Phosphorylated S CLMN 112105.2 6 10 726.1 236.61 HUMAN 1 4.3756 1.5774 SAHYGGPSPEKKAKS-p O94762;S727-p SAHYGGPSPEKKAKS 0.213516296888393 0.165457050690476 0.191 -0.321333333333333 12.9261999674683 10.2749084133054 0.191 -0.321333333333333 0.0509776725418032 0.0938661831542122 2.49777701867283 -2.02866860662064 O94762 RECQL5 O94762.S727.p_RECQL5 O94762_S727s _1_1_727_727 O94762 O94762|O94762-4 ATP-dependent DNA helicase Q5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9320.9320.3 20.02 20.02 3.831 3 1 1 0 722.0212 2084.0813 S727s TMT10 714 (R) GEVPGGSAHYGGPsPEK (K) GEVPGGS(0.0)AHY(0.0)GGPS(0.99)PEK K:TMT10,s:Phosphorylated S RECQL5 110568 8 2 823.1 218.4 HUMAN 1 12.9262 -10.2749 SAIKSSESPRDSVVR-p Q8IXS8;S398-p SAIKSSESPRDSVVR 0.950446988114183 0.997027909793755 -0.01 -0.000666666666666649 0.437477961290945 0.0186776317289232 -0.01 -0.000666666666666675 0.904174394235455 0.995708551057491 -0.126141443397646 -0.00563094952597252 Q8IXS8 FAM126B Q8IXS8.S398.p_FAM126B Q8IXS8_S398s _1_1_398_398 Q8IXS8 Q8IXS8 Protein FAM126B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5398.5398.4 9.88 5.79 2.464 4 1 1 0 472.0046 1805.0281 S398s TMT10 395 (K) SSEsPRDSVVRK (Q) S(0.0)S(0.0)ES(0.99)PRDS(0.0)VVRK K:TMT10,s:Phosphorylated S FAM126B 59101.9 3 4 955.1 195.77 HUMAN 1 -0.4375 -0.0187 SAISRAVSDASAGDY-p Q16630-2;S471-p SAISRAVSDASAGDY 0.502812265515442 0.0128313351438553 0.0886666666666667 0.422666666666667 5.50887853443752 26.3540721673466 0.0886666666666667 0.422666666666667 0.281262703284125 0.00231522276053029 1.19654955526984 5.38789641885098 Q16630 CPSF6 Q16630.2.S471.p_CPSF6 Q16630-2_S471s _1_1_471_471 Q16630-2 Q16630-2|Q16630-3|F8WJN3 Isoform 2 of Cleavage and polyadenylation specificity factor subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.37980.37980.3 19.49 16.71 1.214 7 1 1 0 997.5283 2910.6076 S471s TMT10 469 (R) AVsDASAGDYGSAIETLVTAISLIK (Q) AVS(0.99)DAS(0.0)AGDY(0.0)GS(0.0)AIET(0.0)LVT(0.0)AIS(0.0)LIK K:TMT10,s:Phosphorylated S CPSF6 63640.9 2 4 1308.1 155.75 HUMAN 1 5.5089 26.3541 SAKELEDSPQENVSV-p Q5F1R6-3;S443-p SAKELEDSPQENVSV 0.229977783899196 0.200501267663209 -0.184333333333333 0.137 12.2664819375164 9.18245713189417 -0.184333333333333 0.137 0.0593405826527584 0.120713067687291 -2.37969217573863 1.83927542319796 Q5F1R6 DNAJC21 Q5F1R6.3.S443.p_DNAJC21 Q5F1R6-3_S443s _1_1_443_443 Q5F1R6-3 Q5F1R6-2|Q5F1R6-3 Isoform 3 of DnaJ homolog subfamily C member 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21165.21165.4 21.25 14.68 1.115 4 1 1 0 1014.2741 3974.1086 S443s TMT10 439 (K) ELEDsPQENVSVTEIIKPCDDPKSEAK (S) ELEDS(0.99)PQENVS(0.0)VT(0.0)EIIKPCDDPKS(0.0)EAK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DNAJC21 64139.2 3 5 1325.1 153.94 HUMAN 1 -12.2665 9.1825 SAKIKLKSSELQAIK-p Q9UKM9-2;S168-p SAKIKLKSSELQAIK 0.654531796805768 0.113209479996292 -0.0776666666666667 0.170666666666667 3.44989709852045 12.4785264955205 -0.0776666666666667 0.170666666666667 0.451866650749976 0.0565128683072757 -0.810399534490866 2.41624831972275 Q9UKM9 RALY Q9UKM9.2.S168.p_RALY Q9UKM9-2_S168s _1_1_168_168 Q9UKM9-2 Q9UKM9|Q9UKM9-2 Isoform 1 of RNA-binding protein Raly HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30899.30899.4 19.42 19.42 1.104 4 1 1 0 732.4403 2846.7736 S168s TMT10 166 (K) LKsSELQAIKTELTQIK (S) LKS(0.99)S(0.0)ELQAIKT(0.0)ELT(0.0)QIK K:TMT10,s:Phosphorylated S RALY 30420.5 3 11 967.1 193.88 HUMAN 1 -3.4499 12.4785 SAKKVVVSPTKKVAV-p P19338;S67-p SAKKVVVSPTKKVAV 0.804235267767312 0.00109454193985794 -0.0433333333333333 -1.13066666666667 1.82442255836163 49.8932077210306 -0.0433333333333333 -1.13066666666667 0.656988464414442 1.02489465424294e-05 -0.469558258000054 -15.6198512180157 P19338 NCL P19338.S67.p_NCL P19338_S67s _1_1_67_67 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.10943.11529.3 12.82 12.82 12.824 2 1 1 0 661.4244 1902.2922 S67s TMT10 63 (K) KVVVsPTKK (V) KVVVS(0.99)PT(0.0)KK K:TMT10,s:Phosphorylated S NCL 76670.1 58 1 114.1 570.88 HUMAN 1 -1.8244 -49.8932 SAKLLGMSFMNRSSG-p Q9UIQ6;S80-p SAKLLGMSFMNRSSG 0.32003811870746 0.0201264196371064 -0.182666666666667 -0.449666666666667 9.26100616562737 23.2409741554018 -0.182666666666667 -0.449666666666667 0.118549406322146 0.00474135621122217 -1.85355414973555 -4.60639652542368 Q9UIQ6 LNPEP Q9UIQ6.S80.p_LNPEP Q9UIQ6_S80s _1_1_80_80 Q9UIQ6 Q9UIQ6|Q9UIQ6-2|Q9UIQ6-3 Leucyl-cystinyl aminopeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29182.29182.2 10.61 6.12 99 1 1 1 0 689.3362 1297.6958 S80s TMT10 76 (K) LLGMsFMNR (S) LLGMS(1.0)FMNR s:Phosphorylated S LNPEP 117860.4 2 2 3800.1 42.87 HUMAN 1 -9.261 -23.241 SAKNALESYAFNMKS-p A0A0G2JIW1;S545-p SAKNALESYAFNMKS 0.629969878212203 0.0883815370999018 0.072 0.348 3.73243825076131 13.9444473292176 0.072 0.348 0.423405187786431 0.0403232257366608 0.865626472637616 2.68112396533341 A0A0G2JIW1 NotFound A0A0G2JIW1.S545.p_NotFound A0A0G2JIW1_S545s _1_1_545_545 A0A0G2JIW1 A0A0G2JIW1|P0DMV8|P34931|P0DMV8-2|V9GZ37 Heat shock 70 kDa protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24704.24704.3 10.24 10.24 4.444 2 1 1 0 609.3043 1745.9297 S545s TMT10 541 (K) NALEsYAFNMK (S) NALES(0.99)Y(0.0)AFNMK K:TMT10,s:Phosphorylated S HSPA1B 70393.3 1 5 367.3 341.38 HUMAN 1 3.7324 13.9444 SAKPSSTTPRLSRLA-p E7EVA0;T2062-p SAKPSSTTPRLSRLA 0.187863102695022 0.147228921248642 0.261333333333333 0.157666666666667 14.2528801486242 10.9516943200969 0.261333333333333 0.157666666666667 0.0375588239545955 0.0803212702379491 2.73946701467132 2.14668580928104 E7EVA0 NotFound E7EVA0.T2062.p_NotFound E7EVA0_T2062tS2066s_2_2_2062_2066 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4461.4461.3 8 1.84 1.169 5 2 2 0 497.5755 1330.764 T2062t S2066s TMT10 2058 (K) PSSTtPRLsR (L) PS(0.0)S(0.0)T(0.0)T(0.99)PRLS(0.99)R t:Phosphorylated T,s:Phosphorylated S MAP4 246695.2 1 47 38.1 865.62 HUMAN 1 14.2529 10.9517 SAKRPAGSAKAENDK-p Q9P206-3;S32-p SAKRPAGSAKAENDK 0.476862386005606 0.190943054200091 0.112 -0.142666666666667 5.9181736993279 9.45712306925188 0.112 -0.142666666666667 0.255966205295245 0.113315075654139 1.2699731756424 -1.88681100465422 Q9P206 KIAA1522 Q9P206.3.S32.p_KIAA1522 Q9P206-3_S32s _1_1_32_32 Q9P206-3 Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4101.4101.3 8.22 3.94 99 1 1 1 0 671.0363 1931.1277 S32s TMT10 28 (K) RPAGsAKAENDK (H) RPAGS(1.0)AKAENDK K:TMT10,s:Phosphorylated S KIAA1522 108782.6 2 4 62.1 704.36 HUMAN 1 5.9182 -9.4571 SAKRRKVSPESSPDQ-p Q8IYW5;S411-p SAKRRKVSPESSPDQ 0.76931520167793 0.431492664272224 0.0523333333333333 -0.084 2.18131892512876 4.86359552520078 0.0523333333333333 -0.084 0.605157064435735 0.32631756191081 0.548592246560455 -1.07878795743099 Q8IYW5 RNF168 Q8IYW5.S411.p_RNF168 Q8IYW5_S411s _1_1_411_411 Q8IYW5 Q8IYW5 E3 ubiquitin-protein ligase RNF168 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17155.17155.4 18.91 18.91 1.339 5 1 1 0 765.8915 2980.5718 S411s TMT10 409 (R) KVsPESSPDQEETEINFTQK (L) KVS(0.99)PES(0.0)S(0.0)PDQEET(0.0)EINFT(0.0)QK K:TMT10,s:Phosphorylated S RNF168 66159.9 4 6 1172.1 170.1 HUMAN 1 2.1813 -4.8636 SAKSCSPSPVSPQVQ-p Q9NQW6;S99-p SAKSCSPSPVSPQVQ 0.326106298508116 0.0271669948321718 0.135666666666667 -0.317666666666667 9.11370798141338 21.2470107595176 0.135666666666667 -0.317666666666667 0.12263916978253 0.00750410537733546 1.8280481912357 -4.14763735957732 Q9NQW6 ANLN Q9NQW6.S99.p_ANLN Q9NQW6_S99s_1_1_99_99 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29291.29291.4 8.92 8.92 1.393 8 1 1 0 920.2001 3581.8141 S99s M126m TMT10 95 (K) SCSPsPVSPQVQPQAADTISDSVAVPASLLGmR (R) S(0.0)CS(0.0)PS(0.99)PVS(0.0)PQVQPQAADT(0.0)IS(0.0)DS(0.0)VAVPAS(0.0)LLGM(1.0)R C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine ANLN 125566 10 12 68.1 675.08 HUMAN 1 9.1137 -21.247 SAKSFSRSPSWRKMF-p O75145;S1127-p SAKSFSRSPSWRKMF 0.776758299864296 0.0200678473676497 -0.0436666666666667 -0.329 2.10529872523913 23.2605492407027 -0.0436666666666667 -0.329 0.615843167484624 0.00472003344478807 -0.531996950157304 -4.61105242395913 O75145 PPFIA3 O75145.S1127.p_PPFIA3 O75145_S1127s _1_1_1127_1127 O75145 O75145|O75145-2|A0A0C4DGR8 Liprin-alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9204.9204.4 11.89 11.89 1.236 4 1 1 0 444.739 1695.9695 S1127s TMT10 1123 (K) SFSRsPSWRK (M) S(0.0)FS(0.0)RS(0.99)PS(0.0)WRK K:TMT10,s:Phosphorylated S PPFIA3 134064.6 5 14 248.2 410.18 HUMAN 1 -2.1053 -23.2605 SAKSSEMSPVPMRSA-p Q8TEU7;S1157-p SAKSSEMSPVPMRSA 0.333833894765237 0.688070934478663 0.163333333333333 0.042 8.89337279299482 2.22312506968788 0.163333333333333 0.042 0.129021688356338 0.599359637503554 1.78990524606244 0.557599212830572 Q8TEU7 RAPGEF6 Q8TEU7.S1157.p_RAPGEF6 Q8TEU7_S1157s _1_1_1157_1157 Q8TEU7 Q8TEU7-4|Q8TEU7-3|Q8TEU7-5|Q8TEU7-2|B7Z7Y1 Rap guanine nucleotide exchange factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11709.11709.2 11.63 11.63 2.586 3 1 1 0 715.3246 1349.6755 S1157s TMT10 1153 (K) SSEMsPVPMR (S) S(0.0)S(0.0)EMS(0.99)PVPMR s:Phosphorylated S RAPGEF6 180960.1 3 12 795.1 224.05 HUMAN 1 8.8934 2.2231 SAKSVPVTPARPPPH-p Q99618;T10-p SAKSVPVTPARPPPH 0.409041787828506 0.0314271135473857 0.128666666666667 -0.375 7.15859357501532 20.2997636138094 0.128666666666667 -0.375 0.19237146063262 0.00933305099147464 1.48874662545501 -3.93982285035584 Q99618 CDCA3 Q99618.T10.p_CDCA3 Q99618_T10t _1_1_10_10 Q99618 Q99618|J3KMY0|F8WDL1|F5GX58 Cell division cycle-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7569.7569.4 19.67 19.24 4.298 2 1 1 0 509.5371 1955.1591 T10t TMT10 6 (K) SVPVtPARPPPHNK (H) S(0.0)VPVT(0.99)PARPPPHNK K:TMT10,t:Phosphorylated T CDCA3 28997.8 3 1 831.1 215.73 HUMAN 1 7.1586 -20.2998 SALCNADSPKDPVLP-p Q29RF7;S1097-p SALCNADSPKDPVLP 0.453708353731836 0.0399680514577044 -0.0993333333333333 -0.270333333333333 6.33221139365139 18.750650130566 -0.0993333333333333 -0.270333333333333 0.232690611350127 0.0133332182148636 -1.34353564412627 -3.61269361648574 Q29RF7 PDS5A Q29RF7.S1097.p_PDS5A Q29RF7_S1097s _1_1_1097_1097 Q29RF7 Q29RF7 Sister chromatid cohesion protein PDS5 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20250.20250.4 18.31 12.68 7.669 2 1 1 0 653.3466 2530.3976 S1097s TMT10 1090 (K) SALCNADsPKDPVLPMK (F) S(0.0)ALCNADS(0.99)PKDPVLPMK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PDS5A 152367.9 2 1 1024.1 187.11 HUMAN 1 -6.3322 -18.7507 SALKDKGSSLEPRQH-p Q99743;S384-p SALKDKGSSLEPRQH 0.23797684518109 0.00137827447980014 0.176666666666667 1.18666666666667 11.9295132146413 46.4042708692068 0.176666666666667 1.18666666666667 0.0641281451531836 2.28861591177433e-05 2.31983841706525 13.4242225095992 Q99743 NPAS2 Q99743.S384.p_NPAS2 Q99743_S384s _1_1_384_384 Q99743 Q99743 Neuronal PAS domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6073.6073.2 7.32 2.11 1.507 2 1 1 0 527.7612 974.5468 S384s TMT10 383 (K) GsSLEPR (Q) GS(0.99)S(0.0)LEPR s:Phosphorylated S NPAS2 92587.7 1 1 7202.1 7.32 HUMAN 1 11.9295 46.4043 SALKREFSGGSYSAK-p Q5VT25-2;S1673-p SALKREFSGGSYSAK 0.12782311980828 0.168000381415784 -0.417333333333333 0.206 18.508347915267 10.1908543316522 -0.417333333333334 0.206 0.0140982500311822 0.0957005793341065 -3.56588571296182 2.01405670415466 Q5VT25 CDC42BPA Q5VT25.2.S1673.p_CDC42BPA Q5VT25-2_S1673s _1_1_1673_1673 Q5VT25-2 Q5VT25-6|Q5VT25-2|Q5VT25-5|A0A0A0MRJ0|Q5VT25-4|Q5VT25-3|A0A0A0MRJ1 Isoform 2 of Serine/threonine-protein kinase MRCK alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12076.12291.2 13.22 10.39 1.157 4 1 1 0 785.8807 1490.7891 S1673s TMT10 1671 (R) EFsGGSYSAK (R) EFS(0.99)GGS(0.0)Y(0.0)S(0.0)AK K:TMT10,s:Phosphorylated S CDC42BPA 201918 6 12 917.1 200.65 HUMAN 1 -18.5083 10.1909 SALNPHQSPDFKRSP-p Q9NYL2;S727-p SALNPHQSPDFKRSP 0.608234333641847 0.033093279041258 0.0756666666666667 -0.277 3.99769442773558 19.9577343984749 0.0756666666666667 -0.277 0.398318572855168 0.0100977952445172 0.916688874909721 -3.86627750301998 Q9NYL2 ZAK Q9NYL2.S727.p_ZAK Q9NYL2_S727s _1_1_727_727 Q9NYL2 Q9NYL2 Mitogen-activated protein kinase kinase kinase 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13650.13661.3 14.92 14.92 7.976 3 1 1 0 731.7082 2113.1442 S727s TMT10 717 (R) VSQSALNPHQsPDFK (R) VS(0.0)QS(0.0)ALNPHQS(0.99)PDFK K:TMT10,s:Phosphorylated S MAP3K20 91781 5 9 1239.1 162.96 HUMAN 1 3.9977 -19.9577 SALPRTSSDPVLLKA-p Q9BRG2;S180-p SALPRTSSDPVLLKA 0.477468266229797 0.283944374109889 -0.101333333333333 0.109333333333333 5.90586413708208 7.2100090957391 -0.101333333333333 0.109333333333333 0.256692740312381 0.190107429836363 -1.26777587368041 1.49730025059223 Q9BRG2 SH2D3A Q9BRG2.S180.p_SH2D3A Q9BRG2_S180s _1_1_180_180 Q9BRG2 Q9BRG2|Q9BRG2-2 SH2 domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15642.15642.2 7.32 4.49 1.531 3 1 1 0 634.8387 1188.7037 S180s Hydrogen 178 (R) TSsDPVLLK (A) T(0.0)S(0.0)S(0.99)DPVLLK K:TMT10-Lys-Only,s:Phosphorylated S SH2D3A 63662.5 4 5 1551.1 132.49 HUMAN 1 -5.9059 7.21 SALPYRRSVPTWLKL-p P62277;S21-p SALPYRRSVPTWLKL 0.982990376250462 0.0924702254822229 0.0103333333333333 -0.237333333333333 0.146850426961179 13.6753682074742 0.0103333333333333 -0.237333333333333 0.966751728640133 0.0429005815338058 0.0436462532470273 -2.63197182148948 P62277 RPS13 P62277.S21.p_RPS13 P62277_S21s _1_1_21_21 P62277 P62277 40S ribosomal protein S13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23548.23548.2 9.99 3.32 7.225 2 1 1 0 684.8882 1288.8029 S21s TMT10 21 (R) sVPTWLK (L) S(0.99)VPT(0.0)WLK K:TMT10,s:Phosphorylated S RPS13 17222 1 2 3268.1 55.43 HUMAN 1 0.1469 -13.6754 SALSLSKSPAKLNQS-p J3KNE0;S1299-p SALSLSKSPAKLNQS 0.0775649771385732 0.000993050805672115 -0.485 -1.66866666666667 23.7295212243873 52.4194743851295 -0.485 -1.66866666666667 0.00423689671939138 5.72865359136141e-06 -4.72903422009828 -17.4209637348408 J3KNE0 NotFound J3KNE0.S1299.p_NotFound J3KNE0_S1299s _1_1_1299_1299 J3KNE0 Q99666|O14715|J3KNE0|A6NKT7|A0A286YES2|F8VYC4|P0DJD1|A0A1W2PNU4|P0DJD0|J3KQ37 RanBP2-like and GRIP domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14215.14215.3 11.29 11.29 1.36 4 1 1 0 619.3677 1776.1198 S1299s TMT10 1292 (K) SALSLSKsPAK (L) S(0.0)ALS(0.0)LS(0.0)KS(0.99)PAK K:TMT10,s:Phosphorylated S RGPD3 198988 2 1 9.99 1298.62 HUMAN 1 -23.7295 -52.4195 SALTDKHSDKS____-p Q9NZN5;S1541-p SALTDKHSDKS____ 0.398962840085262 0.899801252921161 -0.129333333333333 0.018 7.36326125639813 0.641653153659984 -0.129333333333333 0.018 0.183515974555115 0.862650115168315 -1.52446222413295 0.181389282655308 Q9NZN5 ARHGEF12 Q9NZN5.S1541.p_ARHGEF12 Q9NZN5_S1541s _1_1_1541_1541 Q9NZN5 Q9NZN5|Q9NZN5-2|E9PMR6 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11038.11038.4 17.08 17.08 2.586 4 1 1 0 550.0512 2117.2169 S1541s TMT10 1531 (R) LAGSALTDKHsDKS (-) LAGS(0.0)ALT(0.0)DKHS(0.99)DKS(0.0) K:TMT10,s:Phosphorylated S ARHGEF12 174199.1 2 15 251.1 406.16 HUMAN 1 -7.3633 0.6417 SALYYTQSEDNIYED-p Q68D51;S305-p SALYYTQSEDNIYED 0.471584237529337 0.243504401148603 0.112333333333333 0.163 6.02402231083741 8.08177091740078 0.112333333333333 0.163 0.249803068564766 0.155533128670721 1.28884184974357 1.64881452547861 Q68D51 DENND2C Q68D51.S305.p_DENND2C Q68D51_S305s _1_1_305_305 Q68D51 Q68D51|Q68D51-3|Q68D51-2 DENN domain-containing protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29822.29822.3 22.14 19.35 2.173 9 1 1 0 1108.1984 3242.6145 S305s TMT10 295 (R) NSGSALYYTQsEDNIYEDIIYPTK (E) NS(0.0)GS(0.0)ALY(0.0)Y(0.0)T(0.0)QS(0.99)EDNIY(0.0)EDIIY(0.0)PT(0.0)K K:TMT10,s:Phosphorylated S DENND2C 108175.7 3 3 2738.1 72.24 HUMAN 1 6.024 8.0818 SAMATRTSLKDEELK-p A0A1B0GUS7;S3199-p SAMATRTSLKDEELK 0.0552688318450056 0.0811012265203804 -0.690666666666667 -0.247 27.4161225149196 14.4648435999903 -0.690666666666667 -0.247 0.00181295802256351 0.0357697281893958 -5.68290200857618 -2.77693836396429 A0A1B0GUS7 NotFound A0A1B0GUS7.S3199.p_NotFound A0A1B0GUS7_S3199s _1_1_3199_3199 A0A1B0GUS7 A0A1B0GUS7|A0A1B0GVW8|B1AM27|O14795-2|I6L9J0|F8W8M9 Protein unc-13 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13798.13798.3 7.09 7.09 7.088 2 1 1 0 610.6797 1750.0565 S3199s TMT10 3198 (R) TsLKDEELK (S) T(0.0)S(0.99)LKDEELK K:TMT10,s:Phosphorylated S UNC13B 488684 1 3 68.2 675.08 HUMAN 1 -27.4161 -14.4648 SAMLGSKSPDPYRLA-p P18583-5;S910-p SAMLGSKSPDPYRLA 0.889575476234096 0.0247605888182867 0.027 0.454333333333333 0.991484543373266 21.8515956063916 0.027 0.454333333333333 0.79588724677552 0.00652890635285132 0.271741048727184 4.28358486318265 P18583 SON P18583.5.S910.p_SON P18583-5_S910s _1_1_910_910 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-6 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14301.14301.3 11.14 11.14 2.017 3 1 1 0 629.6382 1806.9336 S910s TMT10 910 (K) sPDPYRLAQDPYR (L) S(0.99)PDPY(0.0)RLAQDPY(0.0)R s:Phosphorylated S SON 267429.6 1 11 45.1 778.56 HUMAN 1 0.9915 21.8516 SAMLVPVTPEVKPKR-p P82970;T31-p SAMLVPVTPEVKPKR 0.830787004001354 0.00328132424303653 0.032 -0.930333333333333 1.54939538214121 37.1922776658446 0.032 -0.930333333333333 0.699939433672412 0.000190885189492224 0.40652677799661 -8.9374239750788 P82970 HMGN5 P82970.T31.p_HMGN5 P82970_T31t _1_1_31_31 P82970 P82970 High mobility group nucleosome-binding domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26276.26276.4 18.72 18.72 8.944 2 1 1 0 594.855 2296.4281 T31t TMT10 23 (R) LSAMLVPVtPEVKPK (R) LS(0.0)AMLVPVT(0.99)PEVKPK K:TMT10,t:Phosphorylated T HMGN5 31524.1 1 1 5505.1 18.72 HUMAN 1 1.5494 -37.1923 SAMPFTASPASSTTA-p O00151;S130-p SAMPFTASPASSTTA 0.796999034788062 0.0141967693378884 -0.0533333333333333 -0.357666666666667 1.90166967233496 25.6268387102371 -0.0533333333333333 -0.357666666666667 0.645406050932526 0.0027372604911747 -0.486914266042582 -5.1976075406321 O00151 PDLIM1 O00151.S130.p_PDLIM1 O00151_S130s _1_1_130_130 O00151 O00151 PDZ and LIM domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15824.15824.3 16.09 13.84 1.623 7 1 1 0 631.2988 1811.9159 S130s TMT10 123 (R) SAMPFTAsPASSTTAR (V) S(0.0)AMPFT(0.0)AS(0.99)PAS(0.0)S(0.0)T(0.0)T(0.0)AR s:Phosphorylated S PDLIM1 36527.5 10 3 1380.1 148.35 HUMAN 1 -1.9017 -25.6268 SAMSSDGSLAENGVM-p Q9NZB2-6;S1076-p SAMSSDGSLAENGVM 0.202089387369954 0.00863269704744706 0.195333333333333 0.445333333333333 13.4804841230575 29.2818604875337 0.195333333333333 0.445333333333333 0.0448695369522778 0.00117981510274319 2.59801879714029 6.20703916578258 Q9NZB2 FAM120A Q9NZB2.6.S1076.p_FAM120A Q9NZB2-6_S1072sS1073sS1076s_3_3_1072_1076 Q9NZB2-6 Q9NZB2-6|Q9NZB2-4 Isoform F of Constitutive coactivator of PPAR-gamma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20845.20845.4 15.91 15.91 2.669 7 3 3 0 996.4153 3740.7566 S1072s S1073s S1076s N1080n N1093n TMT10 1068 (K) SSAMssDGsLAEnGVMAEEKPAPQMnGSTGDAR (A) S(0.0)S(0.0)AMS(0.99)S(0.99)DGS(0.99)LAEN(1.0)GVMAEEKPAPQMN(1.0)GS(0.0)T(0.0)GDAR K:TMT10,s:Phosphorylated S,n:Deamidated FAM120A 126524.7 5 16 839.1 214.86 HUMAN 1 13.4805 29.2819 SANASKWSPPQNYKK-p Q96K21;S144-p SANASKWSPPQNYKK 0.856591863651627 0.124524730450313 -0.0323333333333333 0.188333333333333 1.30851385072264 11.93437710841 -0.0323333333333333 0.188333333333333 0.739858410195441 0.0640563648519963 -0.349570707876742 2.31955039502292 Q96K21 ZFYVE19 Q96K21.S144.p_ZFYVE19 Q96K21_S144s _1_1_144_144 Q96K21 Q96K21|Q96K21-2|H3BRF9|Q96K21-3 Abscission/NoCut checkpoint regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13832.13832.5 16.36 16.36 1.216 5 1 1 0 498.6619 2409.313 S144s TMT10 135 (R) GSSANASKWsPPQNYK (K) GS(0.0)S(0.0)ANAS(0.0)KWS(0.99)PPQNY(0.0)K K:TMT10,s:Phosphorylated S ZFYVE19 52458.3 19 1 971.1 193.47 HUMAN 1 -1.3085 11.9344 SANGACPSPVGNGYV-p Q14814;S219-p SANGACPSPVGNGYV 0.086569904991124 0.0132589498636546 0.371 0.414333333333333 22.7639501013927 26.1225338294534 0.371 0.414333333333333 0.00529181910462743 0.00244200538364015 4.4988459981646 5.32677361392817 Q14814 MEF2D Q14814.S219.p_MEF2D Q14814_S219s _1_1_219_219 Q14814 Q14814|Q14814-2|Q14814-4|Q14814-5|Q14814-3|Q14814-6 Myocyte-specific enhancer factor 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20209.20209.4 26.58 26.58 7.107 7 1 1 0 1066.519 4183.061 S219s TMT10 189 (R) NSVSPGLPQRPASAGAMLGGDLNSANGACPsPVGNGYVSAR (A) NS(0.0)VS(0.0)PGLPQRPAS(0.0)AGAMLGGDLNS(0.0)ANGACPS(0.99)PVGNGY(0.0)VS(0.0)AR C:Carbamidomethylation,s:Phosphorylated S MEF2D 56165 1 6 1187.1 168.72 HUMAN 1 22.764 26.1225 SANGEDDS_______-p P07910-2;S293-p SANGEDDS_______ 0.595327797782473 0.842675148434626 -0.368666666666667 0.286333333333333 4.15618006650029 1.04498019386741 -0.368666666666667 0.286333333333333 0.384044892186321 0.786143776372675 -0.946868287107965 0.288531012848669 P07910 HNRNPC P07910.2.S293.p_HNRNPC P07910-2_S293s _1_1_293_293 P07910-2 P07910|G3V2Q1|P07910-2|G3V4C1|P07910-4|P07910-3 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4854.4854.3 18.66 18.66 1.421 2 1 1 0 989.0625 2885.2081 S293s TMT10 272 (K) DDEKEAEEGEDDRDSANGEDDs (-) DDEKEAEEGEDDRDS(0.0)ANGEDDS(0.99) K:TMT10,s:Phosphorylated S HNRNPC 32394 1 22 261.1 397.39 HUMAN 1 -4.1562 1.045 SANGGSESDGEENIG-p O43290;S598-p SANGGSESDGEENIG 0.738786253352318 0.156768643033099 -0.0523333333333333 0.336333333333333 2.49393608200479 10.5824207908491 -0.0523333333333333 0.336333333333333 0.563127053207676 0.0874496188445485 -0.615607683801846 2.08220604113285 O43290 SART1 O43290.S598.p_SART1 O43290_S598s _1_1_598_598 O43290 O43290 U4/U6.U5 tri-snRNP-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22510.22510.2 25.15 25.15 2.442 5 1 1 0 1581.7152 3082.4489 S598s TMT10 591 (R) SANGGSEsDGEENIGWSTVNLDEEK (Q) S(0.0)ANGGS(0.0)ES(0.99)DGEENIGWS(0.0)T(0.0)VNLDEEK K:TMT10,s:Phosphorylated S SART1 90424.4 8 4 2155.1 95.34 HUMAN 1 -2.4939 10.5824 SANLSILSGGTPKRC-p P30307;S64-p SANLSILSGGTPKRC 0.519517124214582 0.698301605134956 0.117666666666667 -0.0486666666666666 5.25186473229478 2.14390647477466 0.117666666666667 -0.0486666666666666 0.298410105890626 0.610392730211603 1.15001979420446 -0.540376027477032 P30307 CDC25C P30307.S64.p_CDC25C P30307_S61sS64s_2_2_61_64 P30307 P30307|P30307-2 M-phase inducer phosphatase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.31786.31786.3 8.81 8.81 2.187 4 2 2 0 765.7205 2135.2112 S61s S64s TMT10 53 (K) FLGDSANLsILsGGTPK (R) FLGDS(0.0)ANLS(0.99)ILS(0.99)GGT(0.0)PK K:TMT10,s:Phosphorylated S CDC25C 54219.5 1 6 1847.1 111.23 HUMAN 1 5.2519 -2.1439 SANRENFSPERFLPL-p Q7Z6E9;S861-p SANRENFSPERFLPL 0.919774718344234 0.217778450144277 -0.0176666666666667 0.148 0.709149247650881 8.71169848984301 -0.0176666666666667 0.148 0.849346839813987 0.134533410210231 -0.199241190695422 1.75784715056835 Q7Z6E9 RBBP6 Q7Z6E9.S861.p_RBBP6 Q7Z6E9_S861s _1_1_861_861 Q7Z6E9 Q7Z6E9|Q7Z6E9-2 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24135.24135.4 14.82 14.82 2.563 2 1 1 0 642.3328 2486.3466 S861s TMT10 853 (R) PSANRENFsPERFLPLNIR (N) PS(0.0)ANRENFS(0.99)PERFLPLNIR s:Phosphorylated S RBBP6 202473.6 14 9 27.1 935.6 HUMAN 1 -0.7091 8.7117 SANSRSLSQILMEQL-p Q659A1;S457-p SANSRSLSQILMEQL 0.934343230853707 0.239121353066602 0.013 0.128333333333333 0.580816521077493 8.18733595872353 0.013 0.128333333333333 0.874819284181061 0.151798123920177 0.165151503561123 1.66710215474895 Q659A1 ICE2 Q659A1.S457.p_ICE2 Q659A1_S457s _1_1_457_457 Q659A1 Q659A1 Little elongation complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33320.33320.3 16.52 14.47 1.104 2 1 1 0 652.6934 1876.0978 S457s TMT10 455 (R) SLsQILMEQLQK (E) S(0.0)LS(0.99)QILMEQLQK K:TMT10,s:Phosphorylated S ICE2 111036.5 4 5 1160.1 171.12 HUMAN 1 0.5808 8.1873 SAPELNVSSSETEED-p Q86UV5-8;S898-p SAPELNVSSSETEED 0.918221647629323 0.950561945305192 0.028 0.00800000000000003 0.723510315443035 0.315026444826328 0.028 0.00800000000000005 0.846542893844677 0.93003085164281 0.20300955586223 0.0919614391025567 Q86UV5 USP48 Q86UV5.8.S898.p_USP48 Q86UV5-8_S898sS899sS900s_3_3_898_900 Q86UV5-8 Q86UV5-8|Q86UV5-6 Isoform 8 of Ubiquitin carboxyl-terminal hydrolase 48 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15515.15515.5 13.8 13.8 2.307 7 3 3 0 1125.3287 5382.707 S898s S899s S900s TMT10 890 (K) DSAPELNVsssETEEDKEEAKPDGEKDPDFNQSNGGTKR (Q) DS(0.0)APELNVS(0.99)S(0.99)S(0.99)ET(0.0)EEDKEEAKPDGEKDPDFNQS(0.0)NGGT(0.0)KR K:TMT10,s:Phosphorylated S USP48 122634.9 3 5 3513.1 49.33 HUMAN 1 0.7235 0.315 SAPELRLSLTKGPGN-p Q7Z465;S95-p SAPELRLSLTKGPGN 0.015464429325557 0.00714952946615024 -1.44633333333333 -0.580333333333333 42.6947058497906 30.703960125553 -1.44633333333333 -0.580333333333333 5.37686849735866e-05 0.000850362279506321 -11.4412148133229 -6.63834870043972 Q7Z465 BNIPL Q7Z465.S95.p_BNIPL Q7Z465_S95s _1_1_95_95 Q7Z465 Q7Z465 Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24032.24032.3 11.54 11.54 1.224 3 1 1 0 622.7011 1786.1202 S95s TMT10 87 (R) LSAPELRLsLTK (G) LS(0.0)APELRLS(0.99)LT(0.0)K K:TMT10,s:Phosphorylated S BNIPL 39940.2 2 3 3518.1 49.24 HUMAN 1 -42.6947 -30.704 SAPERTPSPAPKRKK-p Q96P11-2;S444-p SAPERTPSPAPKRKK 0.106562833231388 0.494012735230107 0.312333333333333 -0.0683333333333333 20.4675912902148 4.09480019634472 0.312333333333333 -0.0683333333333333 0.00897926669830064 0.389511227336535 3.98002687616178 -0.935046765713055 Q96P11 NSUN5 Q96P11.2.S444.p_NSUN5 Q96P11-2_S444s _1_1_444_444 Q96P11-2 Q96P11-2|Q63ZY6|Q63ZY6-6|Q3KNT7-3 Isoform 2 of Probable 28S rRNA (cytosine-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6335.6335.2 10.34 6.9 1.104 3 1 1 0 923.9965 1767.0165 S444s TMT10 436 (K) ASAPERTPsPAPK (R) AS(0.0)APERT(0.0)PS(0.99)PAPK K:TMT10,s:Phosphorylated S NSUN5 51151.8 9 4 2119.1 96.89 HUMAN 1 20.4676 -4.0948 SAPGGGGSPGACPAL-p O95197;S30-p SAPGGGGSPGACPAL 0.541991205801994 0.136961575549505 0.135 0.160666666666667 4.90824330729645 11.3770805931578 0.135 0.160666666666667 0.322980029056689 0.072826919588665 1.08721607464421 2.22126619904606 O95197 RTN3 O95197.S30.p_RTN3 O95197_S30s _1_1_30_30 O95197 O95197|O95197-2|O95197-7|O95197-4 Reticulon-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18907.18907.3 20.12 20.12 1.29 11 1 1 0 1307.9381 3841.8136 S30s Acetyl 2 (M) AEPSAATQSHSISSSSFGAEPSAPGGGGsPGACPALGTK (S) AEPS(0.0)AAT(0.0)QS(0.0)HS(0.0)IS(0.0)S(0.0)S(0.0)S(0.0)FGAEPS(0.0)APGGGGS(0.99)PGACPALGT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RTN3 113236.6 1 1 1374.1 148.87 HUMAN 1 4.9082 11.3771 SAPIEEVSPVSRQSI-p Q9H6S3;S449-p SAPIEEVSPVSRQSI 0.582695188042248 0.460135572068747 0.084 -0.07 4.31566332391268 4.49552801278363 0.084 -0.07 0.370197658581435 0.355178933402602 0.977008195695446 -1.01055490245375 Q9H6S3 EPS8L2 Q9H6S3.S449.p_EPS8L2 Q9H6S3_S449s _1_1_449_449 Q9H6S3 Q9H6S3-3|Q9H6S3-2|A0A087WX39 Epidermal growth factor receptor kinase substrate 8-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.36737.36737.5 28.85 22.43 2.297 4 1 1 0 831.411 4073.0494 S449s TMT10 419 (K) FHSGWEPPVDVLQEAPWEVEGLASAPIEEVsPVSR (Q) FHS(0.0)GWEPPVDVLQEAPWEVEGLAS(0.0)APIEEVS(0.99)PVS(0.0)R s:Phosphorylated S EPS8L2 81246.7 3 7 559.1 272.21 HUMAN 1 4.3157 -4.4955 SAPKPQTSPSPKRAT-p Q01518;S308-p SAPKPQTSPSPKRAT 0.729035669255208 0.745717514988468 0.0516666666666667 0.0483333333333334 2.60616582905879 1.75844109202712 0.0516666666666667 0.0483333333333334 0.5487612252387 0.667046163683971 0.639218545740028 0.454566204608505 Q01518 CAP1 Q01518.S308.p_CAP1 Q01518_S308s _1_1_308_308 Q01518 Q01518|Q01518-2 Adenylyl cyclase-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12722.13354.4 13.1 13.1 1.104 5 1 1 0 709.407 2754.6324 S308s TMT10 295 (R) SGPKPFSAPKPQTsPSPK (R) S(0.0)GPKPFS(0.0)APKPQT(0.0)S(0.99)PS(0.0)PK K:TMT10,s:Phosphorylated S CAP1 52357 60 4 1493.1 137.01 HUMAN 1 2.6062 1.7584 SAPPEAESPLASTSK-p Q8NFC6;S2203-p SAPPEAESPLASTSK 0.856181591614162 0.0101099102642081 -0.0316666666666667 0.440666666666667 1.31247789979516 28.0258491063032 -0.0316666666666667 0.440666666666667 0.739183408073012 0.00157548796275258 -0.35052239202506 5.84478524181673 Q8NFC6 BOD1L1 Q8NFC6.S2203.p_BOD1L1 Q8NFC6_S2203s _1_1_2203_2203 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.26950.26950.5 24.16 23.98 2.657 8 1 1 0 862.64 4229.2142 S2203s TMT10 2179 (R) ATGPVLISTADFEGPMPSAPPEAEsPLASTSKEEK (D) AT(0.0)GPVLIS(0.0)T(0.0)ADFEGPMPS(0.0)APPEAES(0.99)PLAS(0.0)T(0.0)S(0.0)KEEK K:TMT10,s:Phosphorylated S BOD1L1 332628.7 2 18 97.1 603.4 HUMAN 1 -1.3125 28.0258 SAPPPKKSLGTQPPK-p Q14978-3;S304-p SAPPPKKSLGTQPPK 0.154045884939488 0.0061067792656021 -0.266333333333333 -0.521666666666667 16.3193371346047 31.928341244838 -0.266333333333333 -0.521666666666667 0.0233381424609479 0.000641454528543831 -3.12974897922931 -7.0288730575812 Q14978 NOLC1 Q14978.3.S304.p_NOLC1 Q14978-3_S304s _1_1_304_304 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10083.10083.3 11.62 11.62 3.138 2 1 1 0 575.0092 1643.0459 S304s TMT10 304 (K) sLGTQPPKK (A) S(0.99)LGT(0.0)QPPKK K:TMT10,s:Phosphorylated S NOLC1 73744 2 6 72.1 655.55 HUMAN 1 -16.3193 -31.9283 SAPQNGPSPMAALMS-p Q9H1B7;S622-p SAPQNGPSPMAALMS 0.805134921082359 0.0772938913506075 0.0376666666666667 0.199 1.81593357783707 14.7518151653365 0.0376666666666667 0.199 0.658273909381645 0.0334825467172364 0.467642034088611 2.8302227378833 Q9H1B7 IRF2BPL Q9H1B7.S622.p_IRF2BPL Q9H1B7_S622s _1_1_622_622 Q9H1B7 Q9H1B7 Interferon regulatory factor 2-binding protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34696.34696.5 24.04 24.04 4.751 8 1 1 0 740.7697 3619.85 S622s TMT10 610 (R) TTPPESAPQNGPsPMAALMSVADTLGTAHSPK (D) T(0.0)T(0.0)PPES(0.0)APQNGPS(0.99)PMAALMS(0.0)VADT(0.0)LGT(0.0)AHS(0.0)PK K:TMT10,s:Phosphorylated S IRF2BPL 83627.3 8 10 282.1 386.92 HUMAN 1 1.8159 14.7518 SAPSRSLSELCLAVP-p O94827-2;S980-p SAPSRSLSELCLAVP 0.911196518625019 0.0145939287297353 0.0313333333333333 0.429666666666667 0.792687433630253 25.4262147776109 0.0313333333333333 0.429666666666667 0.833165458566335 0.00286667541738527 0.221036063654411 5.14597414450879 O94827 PLEKHG5 O94827.2.S980.p_PLEKHG5 O94827-2_S980s _1_1_980_980 O94827-2 O94827-6|O94827-2|O94827-7|O94827-3|O94827-5 Isoform 2 of Pleckstrin homology domain-containing family G member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30501.30501.2 17.7 17.7 3.1 2 1 1 0 946.4994 1812.0251 S980s TMT10 978 (R) SLsELCLAVPAPGIR (T) S(0.0)LS(0.99)ELCLAVPAPGIR C:Carbamidomethylation,s:Phosphorylated S PLEKHG5 121312.9 2 5 2914.1 66.07 HUMAN 1 0.7927 25.4262 SAPTKPQSPAQNATS-p Q96L91;S755-p SAPTKPQSPAQNATS 0.617631263830795 0.0198091090176268 0.130333333333333 0.344666666666667 3.88445061606113 23.3638126305765 0.130333333333333 0.344666666666667 0.408841467419286 0.0046091276589767 0.894976815838938 4.63566449464855 Q96L91 EP400 Q96L91.S755.p_EP400 Q96L91_S755s _1_1_755_755 Q96L91 Q96L91|Q96L91-2|Q96L91-5|Q96L91-3|Q96L91-4 E1A-binding protein p400 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18061.18061.4 33.58 33.58 4.881 12 1 1 0 1272.1339 5005.5503 S755s TMT10 742 (R) TPGVVASAPTKPQsPAQNATSSQDSSQDTLTEQITLENQVHQR (I) T(0.0)PGVVAS(0.0)APT(0.0)KPQS(0.99)PAQNAT(0.0)S(0.0)S(0.0)QDS(0.0)S(0.0)QDT(0.0)LT(0.0)EQIT(0.0)LENQVHQR K:TMT10,s:Phosphorylated S EP400 344909.2 2 17 91.1 620.97 HUMAN 1 3.8845 23.3638 SAPTQRLSPGEALPP-p Q63HR2-4;S951-p SAPTQRLSPGEALPP 0.151446699968719 0.676371567137043 -0.455 0.0456666666666667 16.5092610177331 2.31944490636922 -0.455 0.0456666666666667 0.0223395231301569 0.58621308657023 -3.16659476203619 0.578366960114926 Q63HR2 TNS2 Q63HR2.4.S951.p_TNS2 Q63HR2-4_S951s _1_1_951_951 Q63HR2-4 Q63HR2|Q63HR2-6|F8VV64|Q63HR2-2|Q63HR2-5|Q63HR2-4 Isoform 4 of Tensin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17645.17645.3 18 18 1.14 7 1 1 0 1024.8767 2992.6468 S951s TMT10 941 (R) SPTSAPTQRLsPGEALPPVSQAGTGK (A) S(0.0)PT(0.0)S(0.0)APT(0.0)QRLS(0.99)PGEALPPVS(0.0)QAGT(0.0)GK K:TMT10,s:Phosphorylated S TNS2 155500.6 3 10 453.1 308.04 HUMAN 1 -16.5093 2.3194 SAPVEDDSDAETYGE-p Q9NQS1;S94-p SAPVEDDSDAETYGE 0.132277812902063 0.386255993477595 0.283 0.0916666666666667 18.1312924342483 5.49187587630633 0.283 0.0916666666666667 0.0153769696284097 0.282366006967723 3.48888521211083 1.19322041539714 Q9NQS1 AVEN Q9NQS1.S94.p_AVEN Q9NQS1_S94s _1_1_94_94 Q9NQS1 Q9NQS1 Cell death regulator Aven HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15185.15185.3 27.62 27.62 1.248 6 1 1 0 1409.2722 4145.8485 S94s TMT10 77 (R) REPGGWGAGASAPVEDDsDAETYGEENDEQGNYSK (R) REPGGWGAGAS(0.0)APVEDDS(0.99)DAET(0.0)Y(0.0)GEENDEQGNY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S AVEN 38733.7 6 1 2257.1 91.07 HUMAN 1 18.1313 5.4919 SAPVGKETPSKRMKR-p Q13416;T226-p SAPVGKETPSKRMKR 0.210966553981742 0.00165031614303791 -0.262333333333333 -1.26466666666667 13.0445099904374 44.2916926301179 -0.262333333333333 -1.26466666666667 0.0496076896034798 3.72246597663883e-05 -2.51909048690228 -12.2409941864162 Q13416 ORC2 Q13416.T226.p_ORC2 Q13416_T226t _1_1_226_226 Q13416 Q13416 Origin recognition complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13447.13447.4 14.99 14.99 2.323 3 1 1 0 517.3021 1986.2202 T226t TMT10 217 (R) VVSAPVGKEtPSK (R) VVS(0.0)APVGKET(0.99)PS(0.0)K K:TMT10,t:Phosphorylated T ORC2 66027.4 6 3 1988.1 103.92 HUMAN 1 -13.0445 -44.2917 SAQADSGSSDDEAAS-p Q12894-2;S197-p SAQADSGSSDDEAAS 0.0719549135296335 0.284404869336375 -0.977 -0.308 24.6675477290963 7.20107688654843 -0.977 -0.308 0.00341385622732081 0.190498829413166 -4.96006663316777 -1.49574158010311 Q12894 IFRD2 Q12894.2.S197.p_IFRD2 Q12894-2_S197sS198s_2_2_197_198 Q12894-2 Q12894-2|A0A0R4J2F6|F8WEI6 Isoform 2 of Interferon-related developmental regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4371.4371.3 11.54 11.54 1.177 6 2 2 0 743.9538 2069.9057 S197s S198s TMT10 189 (R) SSAQADSGssDDEAASEAR (S) S(0.0)S(0.0)AQADS(0.0)GS(0.99)S(0.99)DDEAAS(0.0)EAR s:Phosphorylated S IFRD2 66338.4 1 1 6104.1 13.95 HUMAN 2 -24.6675 -7.2011 SAQAKLKSPQAVLQL-p Q9Y6G5;S155-p SAQAKLKSPQAVLQL 0.604667554342646 0.0189198803073457 -0.0936666666666667 -0.338 4.03650306170712 23.7053977888159 -0.0936666666666667 -0.338 0.394775046922275 0.00426049658092504 -0.924100792488706 -4.71769601451535 Q9Y6G5 COMMD10 Q9Y6G5.S155.p_COMMD10 Q9Y6G5_S155s _1_1_155_155 Q9Y6G5 Q9Y6G5|D6RJ90 COMM domain-containing protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22838.22838.3 18.57 18.57 15.476 2 1 1 0 903.1711 2627.5335 S155s TMT10 153 (K) LKsPQAVLQLGVNNEDSK (S) LKS(0.99)PQAVLQLGVNNEDS(0.0)K K:TMT10,s:Phosphorylated S COMMD10 23023.1 2 1 5518.1 18.57 HUMAN 1 -4.0365 -23.7054 SAQASLASKDKTPKS-p E7ETA6;S1290-p SAQASLASKDKTPKS 0.373286167839328 0.30090774310507 -0.201333333333333 -0.155666666666667 7.93136813426673 6.88545581647532 -0.201333333333333 -0.155666666666667 0.161013832216315 0.204858702794783 -1.62325251277894 -1.44055610314656 E7ETA6 PCM1 E7ETA6.S1290.p_PCM1 E7ETA6_S1290s _1_1_1290_1290 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9702.9702.2 15.97 15.97 3.464 3 1 1 0 736.4002 1391.8259 S1290s TMT10 1282 (K) ASAQASLAsK (D) AS(0.0)AQAS(0.0)LAS(0.99)K K:TMT10,s:Phosphorylated S PCM1 229381.8 2 39 13.1 1159.95 HUMAN 1 -7.9314 -6.8855 SAQDPVPSKLLPFEG-p Q9BTC0;S1172-p SAQDPVPSKLLPFEG 0.368041649069891 0.15641637371979 -0.174 0.151 8.04847534727126 10.5951076627226 -0.174 0.151 0.156730119697955 0.0871945285270544 -1.64356876953701 2.08441770823429 Q9BTC0 DIDO1 Q9BTC0.S1172.p_DIDO1 Q9BTC0_S1172s _1_1_1172_1172 Q9BTC0 Q9BTC0|Q9BTC0-1 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.32270.32270.3 10.09 8.49 4.339 3 1 1 0 765.421 2214.2786 S1172s TMT10 1158 (K) DLYLIPLSAQDPVPsK (L) DLY(0.0)LIPLS(0.0)AQDPVPS(0.99)K K:TMT10,s:Phosphorylated S DIDO1 245579.9 1 15 153.1 505.54 HUMAN 1 -8.0485 10.5951 SAQGSDMSLTACKV_-p A0A140T8Y4;S365-p SAQGSDMSLTACKV_ 0.212702492337707 0.190013173716585 0.192 -0.178 12.9733942444074 9.48401471828251 0.192 -0.178 0.0504267031770654 0.112615593034793 2.50627381167785 -1.89146707313594 A0A140T8Y4 NotFound A0A140T8Y4.S365.p_NotFound A0A140T8Y4_S365s _1_1_365_365 A0A140T8Y4 A0A140T8Y4|P18462|P30450|P30512|P16189|P10314|P16190|P30453|P30456|P30457|P30459|B0UXQ0 HLA class I histocompatibility antigen, A-3 alpha chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14778.14778.4 17.23 17.23 1.204 9 1 1 0 840.9086 3280.6393 S365s TMT10 346 (R) KGGSYSQAASSDSAQGSDMsLTACKV (-) KGGS(0.0)Y(0.0)S(0.0)QAAS(0.0)S(0.0)DS(0.0)AQGS(0.0)DMS(0.99)LT(0.0)ACKV K:TMT10,C:Carbamidomethylation,s:Phosphorylated S HLA-A 41906 1 2 3870.1 41.51 HUMAN 1 12.9734 -9.484 SAQGSDVSLTA____-p Q29940;S359-p SAQGSDVSLTA____ 0.221798193479614 0.128782702969415 0.322666666666667 -0.306333333333333 12.5877943084938 11.7363271193473 0.322666666666667 -0.306333333333333 0.0551087511248704 0.0670451378513292 2.4370481477812 -2.28454128769686 Q29940 NotFound Q29940.S359.p_NotFound Q29940_S356sS359s_2_2_356_359 Q29940 P30490|P30491|P30492|P30493|Q29836|P10319|P30464|P18463|Q95365|P30483|P30487|P30488|P18464|Q29940|P30498|Q29718|P30466|P30685|P30475|P30484|P30495 HLA class I histocompatibility antigen, B-59 alpha chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8936.8936.4 15.81 15.81 1.144 11 2 2 0 899.1837 3433.7762 S356s S359s TMT10 334 (R) RKSSGGKGGSYSQAASSDSAQGsDVsLTA (-) RKS(0.0)S(0.0)GGKGGS(0.0)Y(0.0)S(0.0)QAAS(0.0)S(0.0)DS(0.0)AQGS(0.99)DVS(0.99)LT(0.0)A K:TMT10,s:Phosphorylated S HLA-B 40868.9 1 1 5856.1 15.81 HUMAN 1 12.5878 -11.7363 SAQKQKNSPLLSTDF-p Q8ND24-2;S47-p SAQKQKNSPLLSTDF 0.855055591870974 0.153423914074048 0.0306666666666667 0.201 1.32112469603539 10.7059933041444 0.0306666666666667 0.201 0.737713159198268 0.0849964269904582 0.352596568154678 2.10375863611476 Q8ND24 RNF214 Q8ND24.2.S47.p_RNF214 Q8ND24-2_S47s _1_1_47_47 Q8ND24-2 Q8ND24-2|E9PN76 Isoform 2 of RING finger protein 214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17827.17827.3 13.15 13.15 1.309 3 1 1 0 715.7369 2065.2261 S47s TMT10 44 (K) QKNsPLLSTDFK (T) QKNS(0.99)PLLS(0.0)T(0.0)DFK K:TMT10,s:Phosphorylated S RNF214 61887.1 5 13 887.2 205.7 HUMAN 1 1.3211 10.706 SAQKQKNSPLLSVSS-p Q8ND24;S47-p SAQKQKNSPLLSVSS 0.896873028140097 0.61107936054356 0.026 -0.0696666666666666 0.926384604388766 2.90600180018109 0.026 -0.0696666666666666 0.807907313509072 0.512153116733395 0.255309459079447 -0.70115801810065 Q8ND24 RNF214 Q8ND24.S47.p_RNF214 Q8ND24_S47s _1_1_47_47 Q8ND24 Q8ND24 RING finger protein 214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18171.18171.3 17.41 15.22 1.569 6 1 1 0 833.4786 2418.4535 S47s TMT10 44 (K) QKNsPLLSVSSQTITK (E) QKNS(0.99)PLLS(0.0)VS(0.0)S(0.0)QT(0.0)IT(0.0)K K:TMT10,s:Phosphorylated S RNF214 78407.7 5 4 887.1 205.7 HUMAN 1 0.9264 -2.906 SAQKRWNSLPSENHK-p Q15785;S160-p SAQKRWNSLPSENHK 0.10503732738293 0.0379569294197724 -0.327 -0.272 20.6031360138769 19.0807129486823 -0.327 -0.272 0.00870334899491766 0.0123574455387606 -4.0096021633516 -3.68113552268498 Q15785 TOMM34 Q15785.S160.p_TOMM34 Q15785_S160s _1_1_160_160 Q15785 Q15785 Mitochondrial import receptor subunit TOM34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9634.9634.3 8.13 8.13 1.469 2 1 1 0 635.9938 1826.0073 S160s TMT10 157 (K) RWNsLPSENHK (E) RWNS(0.99)LPS(0.0)ENHK K:TMT10,s:Phosphorylated S TOMM34 34958.1 2 2 4280.1 34.32 HUMAN 1 -20.6031 -19.0807 SAQSPPLSPLALGIK-p Q9C0D6;S664-p SAQSPPLSPLALGIK 0.045879533129693 0.00914826924812473 -0.68 -0.488333333333333 29.7471176341534 28.8347001791947 -0.68 -0.488333333333333 0.00105995697384507 0.00130776581910643 -6.35555101030922 -6.07612379259677 Q9C0D6 FHDC1 Q9C0D6.S664.p_FHDC1 Q9C0D6_S660sS664s_2_2_660_664 Q9C0D6 Q9C0D6 FH2 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28927.28927.4 13.96 13.96 3.936 6 2 2 0 772.1587 2925.6814 S660s S664s TMT10 648 (K) RYSEPVSLGSAQsPPLsPLALGIK (E) RY(0.0)S(0.0)EPVS(0.0)LGS(0.0)AQS(0.99)PPLS(0.99)PLALGIK K:TMT10,s:Phosphorylated S FHDC1 125729.4 2 4 2652.1 75.2 HUMAN 1 -29.7471 -28.8347 SAQTSLDSQEESTGI-p Q92628;S1194-p SAQTSLDSQEESTGI 0.862317355465895 0.979326453741939 0.0296666666666667 -0.00266666666666665 1.25683585243588 0.129717866242922 0.0296666666666666 -0.00266666666666665 0.748714794405433 0.970573017210183 0.337117617905065 -0.0386232279149364 Q92628 KIAA0232 Q92628.S1194.p_KIAA0232 Q92628_S1194s _1_1_1194_1194 Q92628 Q92628 Uncharacterized protein KIAA0232 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21029.21029.3 17.19 17.19 2.186 7 1 1 0 859.1021 2495.3241 S1194s TMT10 1187 (K) SAQTSLDsQEESTGILSVGK (Q) S(0.0)AQT(0.0)S(0.0)LDS(0.99)QEES(0.0)T(0.0)GILS(0.0)VGK K:TMT10,s:Phosphorylated S KIAA0232 157125.3 1 11 568.1 270.65 HUMAN 1 1.2568 -0.1297 SAQVKRPSVSKEGRK-p A0FGR8-6;S697-p SAQVKRPSVSKEGRK 0.574658438736738 0.0116327352591839 -0.193333333333333 -1.97533333333333 4.42633330187593 27.0515060856122 -0.193333333333333 -1.97533333333333 0.360883203953681 0.00197173884014217 -0.997795638011491 -5.57512429590815 A0FGR8 ESYT2 A0FGR8.6.S697.p_ESYT2 A0FGR8-6_S697s _1_1_697_697 A0FGR8-6 A0FGR8-6 Isoform 6 of Extended synaptotagmin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.3816.3816.4 7.52 7.52 7.515 2 1 1 0 389.2191 1473.8902 S697s TMT10 695 (K) RPsVSKEGR (K) RPS(0.99)VS(0.0)KEGR K:TMT10,s:Phosphorylated S ESYT2 105219.8 1 2 1886.1 109.02 HUMAN 1 -4.4263 -27.0515 SAQYETLSDSDD___-p O75376-2;S2333-p SAQYETLSDSDD___ 0.233628206047255 0.901272848642271 0.184666666666667 -0.0123333333333333 12.1274652195724 0.630244767287106 0.184666666666667 -0.0123333333333333 0.0612707897267083 0.864919170773193 2.35496394199988 -0.178354575032685 O75376 NCOR1 O75376.2.S2333.p_NCOR1 O75376-2_S2333sS2335s_2_2_2333_2335 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30902.31545.3 11.83 11.83 1.171 5 2 2 0 975.434 2764.3515 S2333s S2335s TMT10 2316 (R) IWEREPAPLLSAQYETLsDsDD (-) IWEREPAPLLS(0.0)AQY(0.0)ET(0.0)LS(0.99)DS(0.99)DD s:Phosphorylated S NCOR1 259453.1 3 47 35.1 889.74 HUMAN 1 12.1275 -0.6302 SARDASPTPSTDAEY-p O43639;T92-p SARDASPTPSTDAEY 0.131204843499942 0.412087125161981 0.350333333333333 -0.260666666666667 18.2323781934619 5.12117921147854 0.350333333333333 -0.260666666666667 0.0150231907195827 0.307526169561973 3.50944771941449 -1.12598687439518 O43639 NCK2 O43639.T92.p_NCK2 O43639_T92t _1_1_92_92 O43639 O43639 Cytoplasmic protein NCK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8329.8329.3 16.27 13.29 1.874 6 1 1 0 796.6784 2308.0527 T92t TMT10 88 (R) DASPtPSTDAEYPANGSGADR (I) DAS(0.0)PT(0.99)PS(0.0)T(0.0)DAEY(0.0)PANGS(0.0)GADR t:Phosphorylated T NCK2 43142.5 1 2 2561.1 78.45 HUMAN 1 18.2324 -5.1212 SAREKELSPPPGLPS-p Q7Z4S6-5;S1192-p SAREKELSPPPGLPS 0.272413698836405 0.00320981770772267 -0.188333333333333 -0.664666666666667 10.6974758337767 37.3747773164126 -0.188333333333333 -0.664666666666667 0.0851632872569037 0.000183029995215236 -2.10319017823768 -9.01099852343581 Q7Z4S6 KIF21A Q7Z4S6.5.S1192.p_KIF21A Q7Z4S6-5_S1192s _1_1_1192_1192 Q7Z4S6-5 Q7Z4S6-4|Q7Z4S6-2|Q7Z4S6-5|Q7Z4S6-3|Q7Z4S6-6 Isoform 5 of Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17206.17411.3 15.19 15.19 6.894 2 1 1 0 716.0755 2066.2465 S1192s TMT10 1188 (R) EKELsPPPGLPSK (I) EKELS(0.99)PPPGLPS(0.0)K K:TMT10,s:Phosphorylated S KIF21A 184163.5 7 15 390.1 332.37 HUMAN 1 -10.6975 -37.3748 SARKRSASADNLTLP-p Q8ND76;S326-p SARKRSASADNLTLP 0.957960301214889 0.0619237436116897 0.00866666666666667 0.227333333333333 0.362065989649133 16.0832331485913 0.00866666666666667 0.227333333333333 0.92001180725864 0.0246420415284645 0.105193285468533 3.08199648594946 Q8ND76 CCNY Q8ND76.S326.p_CCNY Q8ND76_S326s _1_1_326_326 Q8ND76 Q8ND76|Q8ND76-2|Q8ND76-3 Cyclin-Y HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14237.14237.2 13.96 13.96 2.376 3 1 1 0 727.3666 1373.7586 S326s TMT10 324 (R) SAsADNLTLPR (W) S(0.0)AS(0.99)ADNLT(0.0)LPR s:Phosphorylated S CCNY 39849.4 7 11 1234.1 163.69 HUMAN 1 0.3621 16.0832 SARLRLGSGSNGLLR-p Q9HC62;S333-p SARLRLGSGSNGLLR 0.0395731079578075 0.00589303770702603 -0.514333333333333 -0.654666666666667 31.4102110675971 32.2211317384261 -0.514333333333333 -0.654666666666667 0.00072273467776358 0.000599634795621359 -6.87292515484944 -7.12501664633483 Q9HC62 SENP2 Q9HC62.S333.p_SENP2 Q9HC62_S333s _1_1_333_333 Q9HC62 Q9HC62|Q9HC62-2 Sentrin-specific protease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11007.11007.2 9.14 7.19 2.479 2 1 1 0 527.2585 973.5425 S333s Hydrogen 331 (R) LGsGSNGLLR (R) LGS(0.99)GS(0.0)NGLLR s:Phosphorylated S SENP2 68652.1 4 5 1030.1 186.01 HUMAN 1 -31.4102 -32.2211 SARRNSSSPVSPASV-p Q9H1B7;S659-p SARRNSSSPVSPASV 0.351928236415973 0.0463462978252902 0.157666666666667 0.346333333333333 8.42298439019846 17.8489316806615 0.157666666666667 0.346333333333333 0.143781020250276 0.0164099339089254 1.7084696618002 3.42897871884514 Q9H1B7 IRF2BPL Q9H1B7.S659.p_IRF2BPL Q9H1B7_S659s _1_1_659_659 Q9H1B7 Q9H1B7 Interferon regulatory factor 2-binding protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6365.6365.2 8.51 7.27 1.15 5 1 1 0 967.9852 1854.9983 S659s TMT10 656 (R) NSSsPVSPASVPGQRR (L) NS(0.0)S(0.0)S(0.99)PVS(0.0)PAS(0.0)VPGQRR s:Phosphorylated S IRF2BPL 83627.3 2 14 282.1 386.92 HUMAN 1 8.423 17.8489 SASASRKSQEKPREI-p P14868;S10-p SASASRKSQEKPREI 0.0970963427309302 0.00562708483008173 0.461 0.636333333333333 21.4791928531377 32.6030938803471 0.461 0.636333333333334 0.00711345706699264 0.000549149524597014 4.20383925162525 7.25208946860975 P14868 DARS P14868.S10.p_DARS P14868_S10s _1_1_10_10 P14868 P14868 Aspartate--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17227.17227.5 13.17 10.58 10.493 2 1 1 0 621.9355 3025.6798 S10s TMT10 9 (R) KsQEKPREIMDAAEDYAK (E) KS(0.99)QEKPREIMDAAEDY(0.0)AK K:TMT10,s:Phosphorylated S DARS 57534.6 2 1 3746.1 44.03 HUMAN 1 21.4792 32.6031 SASEKELSPHLPALI-p P12755;S394-p SASEKELSPHLPALI 0.435053977919998 0.0935597375395542 -0.132666666666667 -0.249666666666667 6.65424347995687 13.6081661606236 -0.132666666666667 -0.249666666666667 0.216060636920572 0.0435695810507142 -1.40034400387044 -2.61973591987117 P12755 SKI P12755.S394.p_SKI P12755_S394s _1_1_394_394 P12755 P12755 Ski oncogene HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22872.22872.3 12.33 12.33 99 1 1 1 0 518.9584 1474.8943 S394s TMT10 392 (K) ELsPHLPALIR (D) ELS(1.0)PHLPALIR s:Phosphorylated S SKI 81258.8 1 2 3633.1 46.5 HUMAN 1 -6.6542 -13.6082 SASERLPSVEEAEVP-p E9PDI4;S78-p SASERLPSVEEAEVP 0.130343131685262 0.0134659845747831 -0.353333333333333 -0.372666666666667 18.2985739799163 26.0099578988724 -0.353333333333333 -0.372666666666667 0.0147959413797185 0.00250613354773107 -3.52294490707785 -5.29723806404044 E9PDI4 NotFound E9PDI4.S78.p_NotFound E9PDI4_S78s _1_1_78_78 E9PDI4 E9PDI4|O00515 Ladinin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24654.24654.4 17.88 14.36 17.237 3 1 1 0 935.7465 3659.9784 S78s Hydrogen 76 (R) LPsVEEAEVPKPLPPASKDEDEDIQSILR (T) LPS(0.99)VEEAEVPKPLPPAS(0.0)KDEDEDIQS(0.0)ILR K:TMT10-Lys-Only,s:Phosphorylated S LAD1 58791 1 1 769.1 228.41 HUMAN 1 -18.2986 -26.01 SASGRKISENSYSLD-p Q9UHB6-4;S225-p SASGRKISENSYSLD 0.0249456258107883 0.0013036590626876 -0.767 -0.948333333333333 37.1047760789207 46.9502872944562 -0.767 -0.948333333333333 0.000194770147032312 2.01823284913974e-05 -8.92101531069533 -13.7472112008709 Q9UHB6 LIMA1 Q9UHB6.4.S225.p_LIMA1 Q9UHB6-4_S225s_1_1_225_225 Q9UHB6-4 Q9UHB6-4|Q9UHB6-5|Q9UHB6-2|F8VQE1|F8VRN8 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22762.22762.5 24.17 19.72 1.117 10 1 1 0 892.2473 4376.2461 S225s N227n TMT10 223 (R) KIsEnSYSLDDLEIGPGQLSSSTFDSEKNESRR (N) KIS(0.99)EN(0.99)S(0.0)Y(0.0)S(0.0)LDDLEIGPGQLS(0.0)S(0.0)S(0.0)T(0.0)FDS(0.0)EKN(0.0)ES(0.0)RR K:TMT10,s:Phosphorylated S,n:Deamidated LIMA1 85678.4 33 10 42.1 822.82 HUMAN 1 -37.1048 -46.9503 SASLAPRSPEIMSTI-p Q9UPX8-3;S1661-p SASLAPRSPEIMSTI 0.447471486981734 0.959273532092304 0.105 0.00533333333333332 6.44127737034438 0.260569468944823 0.105 0.00533333333333332 0.226919732516911 0.941766099280226 1.36281178118352 0.0764983657770582 Q9UPX8 SHANK2 Q9UPX8.3.S1661.p_SHANK2 Q9UPX8-3_S1661s _1_1_1661_1661 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6|Q9UPX8-4|E7EUA2 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17720.17720.4 15.58 15.58 4.807 7 1 1 0 568.291 2190.175 S1661s TMT10 1654 (K) SASLAPRsPEIMSTISGTR (S) S(0.0)AS(0.0)LAPRS(0.99)PEIMS(0.0)T(0.0)IS(0.0)GT(0.0)R s:Phosphorylated S SHANK2 202341.2 6 28 86.1 628.23 HUMAN 1 6.4413 0.2606 SASLGSTSKNTSPMR-p Q13490;S125-p SASLGSTSKNTSPMR 0.441348079207725 0.47176649299885 -0.29 0.0743333333333333 6.54157502973443 4.34888396538235 -0.29 0.0743333333333333 0.22173921056733 0.367376695534332 -1.38050476107236 0.983081434667969 Q13490 BIRC2 Q13490.S125.p_BIRC2 Q13490_S125s _1_1_125_125 Q13490 Q13490|E9PMH5|Q13490-2|A0A087X2B2 Baculoviral IAP repeat-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36860.36860.4 21.54 21.54 1.101 8 1 1 0 732.1262 2845.517 S125s TMT10 105 (K) QLYPSCSFIQNLVSASLGSTsK (N) QLY(0.0)PS(0.0)CS(0.0)FIQNLVS(0.0)AS(0.0)LGS(0.0)T(0.0)S(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BIRC2 71153.6 4 2 3580.1 47.77 HUMAN 1 -6.5416 4.3489 SASNGGGSPARREEK-p O60504-2;S31-p SASNGGGSPARREEK 0.81089476501821 0.100028043418156 -0.037 -0.184333333333333 1.74888727901949 13.215051055585 -0.037 -0.184333333333333 0.668515178224428 0.0476974206785647 -0.452444131949785 -2.54846516197608 O60504 SORBS3 O60504.2.S31.p_SORBS3 O60504-2_S31s _1_1_31_31 O60504-2 O60504|O60504-2 Isoform Beta of Vinexin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9238.9238.5 17.8 17.8 1.658 7 1 1 0 661.9245 3225.6289 S31s TMT10 13 (R) DFVYPSSTRDPSASNGGGsPARREEK (K) DFVY(0.0)PS(0.0)S(0.0)T(0.0)RDPS(0.0)AS(0.0)NGGGS(0.99)PARREEK K:TMT10,s:Phosphorylated S SORBS3 36912.6 7 4 1539.1 133.11 HUMAN 1 -1.7489 -13.2151 SASNGSKTDTEEEEE-p Q9UGU0;T1762-p SASNGSKTDTEEEEE 0.685043585085589 0.02314576476409 0.057 0.328666666666667 3.08121342427123 22.3264639725357 0.057 0.328666666666667 0.491902078417082 0.00585266414360192 0.736859935420491 4.39225142522188 Q9UGU0 TCF20 Q9UGU0.T1762.p_TCF20 Q9UGU0_T1762t _1_1_1762_1762 Q9UGU0 Q9UGU0|Q9UGU0-2|A9JX13 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7090.7090.4 16.27 15.25 1.162 5 1 1 0 787.8788 3068.5223 T1762t TMT10 1755 (K) SASNGSKtDTEEEEEQQQQQK (E) S(0.0)AS(0.0)NGS(0.0)KT(0.99)DT(0.0)EEEEEQQQQQK K:TMT10,t:Phosphorylated T TCF20 213250.7 3 25 197.1 457.96 HUMAN 1 3.0812 22.3265 SASNRRMSGEPIQTV-p Q5VT52;S1099-p SASNRRMSGEPIQTV 0.104709651653521 0.261316542792079 -0.347666666666667 0.112 20.6629869771717 7.67890494101887 -0.347666666666667 0.112 0.00858422914965242 0.170651262619888 -4.02270137396262 1.5789251077796 Q5VT52 RPRD2 Q5VT52.S1099.p_RPRD2 Q5VT52_S1099s _1_1_1099_1099 Q5VT52 Q5VT52|Q5VT52-3|Q5VT52-2 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19840.19840.4 13.38 13.38 4.38 3 1 1 0 631.3449 2442.3903 S1099s TMT10 1097 (R) RMsGEPIQTVESIRVPGK (G) RMS(0.99)GEPIQT(0.0)VES(0.0)IRVPGK K:TMT10,s:Phosphorylated S RPRD2 156473.2 8 26 172.1 488.65 HUMAN 1 -20.663 7.6789 SASQKEGSDGDNEDD-p A0A0U1RRH6;S232-p SASQKEGSDGDNEDD 0.513311363016096 0.0390921366602911 -0.15 0.417666666666667 5.35244570456295 18.903051233584 -0.15 0.417666666666667 0.291578454416308 0.0128734478086014 -1.16827135825599 3.64421376113971 A0A0U1RRH6 NotFound A0A0U1RRH6.S232.p_NotFound A0A0U1RRH6_S232sS244sS246s_3_3_232_246 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7777.7777.5 23.93 23.93 2.124 8 3 3 0 1124.2186 5376.1597 S232s S244s S246s N251n TMT10 225 (R) SASQKEGsDGDNEDDEDEGsGsDEDEnDEGNDEDHSSPASEGGCK (K) S(0.0)AS(0.0)QKEGS(0.99)DGDN(0.0)EDDEDEGS(0.99)GS(0.99)DEDEN(0.99)DEGN(0.0)DEDHS(0.0)S(0.0)PAS(0.0)EGGCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated PHF14 109152.4 1 27 126.1 543.2 HUMAN 1 -5.3524 18.9031 SASQSQPSPCDSKSG-p O00512;S62-p SASQSQPSPCDSKSG 0.769121315284167 0.0192358120846332 0.0503333333333333 0.328 2.18655082496195 23.5774056219952 0.0503333333333333 0.328 0.604428477049633 0.00438792744458601 0.549729874157186 4.68684703105029 O00512 BCL9 O00512.S62.p_BCL9 O00512_S62s _1_1_62_62 O00512 O00512 B-cell CLL/lymphoma 9 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5521.5521.3 14.89 14.89 4.363 5 1 1 0 720.333 2079.0177 S62s TMT10 52 (K) QGGSASQSQPsPCDSK (S) QGGS(0.0)AS(0.0)QS(0.0)QPS(0.99)PCDS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BCL9 149515.8 1 4 313.1 369.9 HUMAN 1 2.1866 23.5774 SASREKRSVVSFDKV-p Q15424;S601-p SASREKRSVVSFDKV 0.345621974407163 0.0621773708295257 0.170333333333333 0.270333333333333 8.57313398597739 16.0577734541345 0.170333333333333 0.270333333333333 0.1388949965769 0.0247869251081877 1.73446939651154 3.07710725150885 Q15424 SAFB Q15424.S601.p_SAFB Q15424_S601s _1_1_601_601 Q15424 Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16699.16699.2 9.68 3.86 4.969 2 1 1 0 660.3548 1239.7349 S601s TMT10 601 (R) sVVSFDK (V) S(0.99)VVS(0.0)FDK K:TMT10,s:Phosphorylated S SAFB 103096.3 5 36 83.1 629.62 HUMAN 1 8.5731 16.0578 SASSFLDSDELERTG-p Q14498;S341-p SASSFLDSDELERTG 0.996384841779556 0.873356920289124 0.000999999999999992 -0.0186666666666666 0.0303915267293924 0.828107697784724 0.000999999999999973 -0.0186666666666666 0.99302652069999 0.826397948171535 0.00915105713948464 -0.230165115163165 Q14498 RBM39 Q14498.S341.p_RBM39 Q14498_S341s _1_1_341_341 Q14498 Q14498|Q14498-2|Q14498-3|G3XAC6 RNA-binding protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24877.24877.3 14.02 11.96 1.168 9 1 1 0 1037.4838 3030.4701 S341s TMT10 330 (R) TDASSASSFLDsDELERTGIDLGTTGR (L) T(0.0)DAS(0.0)S(0.0)AS(0.0)S(0.0)FLDS(0.99)DELERT(0.0)GIDLGT(0.0)T(0.0)GR s:Phosphorylated S RBM39 59663.8 2 10 915.1 200.83 HUMAN 1 0.0304 -0.8281 SASSVPNTDDEDSDY-p Q9UH92-3;T56-p SASSVPNTDDEDSDY 0.805400905500171 0.116089728800882 0.0493333333333333 -0.190666666666667 1.81105936239229 12.3369524603791 0.0493333333333334 -0.190666666666667 0.659013124407264 0.0583854664180224 0.466540965280896 -2.39101448483911 Q9UH92 MLX Q9UH92.3.T56.p_MLX Q9UH92-3_T56tS61s_2_2_56_61 Q9UH92-3 Q9UH92|Q9UH92-3 Isoform Beta of Max-like protein X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13649.13649.3 17.93 17.93 1.921 10 2 2 0 1203.1726 3446.5872 N55n T56t S61s TMT10 42 (R) ANSIGSTSASSVPntDDEDsDYHQEAYK (E) AN(0.0)S(0.0)IGS(0.0)T(0.0)S(0.0)AS(0.0)S(0.0)VPN(0.99)T(0.99)DDEDS(0.99)DY(0.0)HQEAY(0.0)K K:TMT10,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S MLX 28053.8 4 7 2068.1 99.55 HUMAN 1 1.8111 -12.337 SASTLQLSPPRTKNI-p Q6N043;S545-p SASTLQLSPPRTKNI 0.685573827086692 0.111417071129047 0.0716666666666667 -0.178666666666667 3.07569103316217 12.5816401370896 0.0716666666666667 -0.178666666666667 0.492527967903285 0.055186898355234 0.73574451301641 -2.43466214903356 Q6N043 ZNF280D Q6N043.S545.p_ZNF280D Q6N043_S545s _1_1_545_545 Q6N043 Q6N043|Q6N043-2|Q6N043-3|Q6N043-4|H0YL38 Zinc finger protein 280D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22683.22683.5 22.15 21.32 1.722 11 1 1 0 707.1861 3451.9161 S545s TMT10 520 (R) ASVGPLQSGASPTPSISASASTLQLsPPRTK (N) AS(0.0)VGPLQS(0.0)GAS(0.0)PT(0.0)PS(0.0)IS(0.0)AS(0.0)AS(0.0)T(0.0)LQLS(0.99)PPRT(0.0)K K:TMT10,s:Phosphorylated S ZNF280D 111279.9 5 2 2653.1 75.19 HUMAN 1 3.0757 -12.5816 SASTQDLSPH_____-p Q6P597-3;S516-p SASTQDLSPH_____ 0.106562833231388 0.00767296279508775 -0.39 -0.538 20.4700644433479 30.1959352501375 -0.39 -0.538 0.0089741547798641 0.000955886823292784 -3.98056538741026 -6.48159732001719 Q6P597 KLC3 Q6P597.3.S516.p_KLC3 Q6P597-3_S516s _1_1_516_516 Q6P597-3 Q6P597-3|Q6P597-2 Isoform 3 of Kinesin light chain 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11859.11859.2 12.44 12.44 5.486 5 1 1 0 783.3739 1485.7747 S516s TMT10 507 (R) TLSASTQDLsPH (-) T(0.0)LS(0.0)AS(0.0)T(0.0)QDLS(0.99)PH s:Phosphorylated S KLC3 57077.1 2 4 2702.1 73.48 HUMAN 1 -20.4701 -30.1959 SASTSQASPSPCITE-p Q66PJ3-7;S44-p SASTSQASPSPCITE 0.470110243897234 0.116501650488491 0.108333333333333 0.191666666666667 6.0507363129332 12.3172593867621 0.108333333333333 0.191666666666667 0.248271214483837 0.0586508163452195 1.29359681045796 2.38750876691743 Q66PJ3 ARL6IP4 Q66PJ3.7.S44.p_ARL6IP4 Q66PJ3-7_S44s _1_1_44_44 Q66PJ3-7 Q66PJ3-7 Isoform 7 of ADP-ribosylation factor-like protein 6-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7842.7842.3 17.19 17.19 2.413 7 1 1 0 754.6622 2182.0066 S44s TMT10 35 (R) NCSASTSQAsPSPCITER (S) NCS(0.0)AS(0.0)T(0.0)S(0.0)QAS(0.99)PS(0.0)PCIT(0.0)ER C:Carbamidomethylation,s:Phosphorylated S ARL6IP4 25519.3 2 6 1859.2 110.77 HUMAN 1 6.0507 12.3173 SASTTSYSPC_____-p Q9P2K3-2;S434-p SASTTSYSPC_____ 0.588938726682811 0.4312604036263 0.11 0.083 4.23537146647435 4.86641185080251 0.11 0.083 0.377105488548758 0.326106019138951 0.961862093247236 1.07930634384549 Q9P2K3 RCOR3 Q9P2K3.2.S434.p_RCOR3 Q9P2K3-2_S434s _1_1_434_434 Q9P2K3-2 Q9P2K3-2 Isoform 2 of REST corepressor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7740.7740.2 10.99 10.99 1.877 7 1 1 0 685.2805 1289.5881 S434s TMT10 427 (K) SASTTSYsPC (-) S(0.0)AS(0.0)T(0.0)T(0.0)S(0.0)Y(0.0)S(0.99)PC C:Carbamidomethylation,s:Phosphorylated S RCOR3 48215.5 1 2 1817.2 112.96 HUMAN 1 4.2354 4.8664 SATAAPQTPDSDIFT-p Q9Y3P9;T284-p SATAAPQTPDSDIFT 0.351928236415973 0.534206601243114 -0.135666666666667 0.0933333333333333 8.4234847192824 3.66323034143606 -0.135666666666667 0.0933333333333334 0.143764456907773 0.430206498008885 -1.7085563125835 0.852046701508285 Q9Y3P9 RABGAP1 Q9Y3P9.T284.p_RABGAP1 Q9Y3P9_T284t _1_1_284_284 Q9Y3P9 Q9Y3P9|Q9Y3P9-2|Q9Y3P9-3 Rab GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.33059.33059.4 14.03 14.03 3.286 8 1 1 0 1044.7837 4096.1581 T284t TMT10 273 (K) QTPLSATAAPQtPDSDIFTFSVSLEIKEDDGK (G) QT(0.0)PLS(0.0)AT(0.0)AAPQT(0.99)PDS(0.0)DIFT(0.0)FS(0.0)VS(0.0)LEIKEDDGK K:TMT10,t:Phosphorylated T RABGAP1 122989.9 1 6 520.1 284.17 HUMAN 1 -8.4235 3.6632 SATDEAGSPLAAAAA-p Q6ZNJ1;S1647-p SATDEAGSPLAAAAA 0.443926771270007 0.56807815897764 0.149 0.0556666666666667 6.49975942026928 3.31090474498664 0.149 0.0556666666666667 0.22388451571477 0.466562173516323 1.37313206757147 0.782766522976252 Q6ZNJ1 NBEAL2 Q6ZNJ1.S1647.p_NBEAL2 Q6ZNJ1_S1647s _1_1_1647_1647 Q6ZNJ1 Q6ZNJ1|Q6ZNJ1-3|Q6ZNJ1-2 Neurobeachin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28403.28403.3 24.62 24.62 3.594 6 1 1 0 1008.8292 2944.5061 S1647s TMT10 1632 (R) VLNTSSLESATDEAGsPLAAAAAAAAAER (C) VLNT(0.0)S(0.0)S(0.0)LES(0.0)AT(0.0)DEAGS(0.99)PLAAAAAAAAAER s:Phosphorylated S NBEAL2 305591.9 4 4 1347.1 151.04 HUMAN 1 6.4998 3.3109 SATDIPPSPGNIPTT-p Q7Z6Z7;S2508-p SATDIPPSPGNIPTT 0.645253408332387 0.959422236694117 -0.138333333333333 -0.0053333333333333 3.56037201646645 0.258875299541856 -0.138333333333333 -0.0053333333333333 0.440517127212157 0.942133551002305 -0.832102648449632 -0.0760145610990578 Q7Z6Z7 HUWE1 Q7Z6Z7.S2508.p_HUWE1 Q7Z6Z7_S2508s_1_1_2508_2508 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.33882.33882.5 16.82 12.22 1.719 6 1 1 0 903.6299 4417.1682 S2508s N2511n M2519m TMT10 2485 (R) FDREDDLIIEFDNMFSSATDIPPsPGnIPTTHPLmVR (H) FDREDDLIIEFDN(0.0)M(0.0)FS(0.0)S(0.0)AT(0.0)DIPPS(0.99)PGN(0.99)IPT(0.0)T(0.0)HPLM(0.99)VR s:Phosphorylated S,n:Deamidated,m:Oxidized methionine HUWE1 485818.9 2 29 11.1 1210.45 HUMAN 1 -3.5604 -0.2589 SATHGGGSPPGTRGP-p P46379-3;S113-p SATHGGGSPPGTRGP 0.196036533561212 0.253375641207012 0.234333333333333 0.129333333333333 13.7889364778352 7.85352173293101 0.234333333333333 0.129333333333333 0.0417932699577159 0.163925994348671 2.65424803023461 1.60923961196419 P46379 BAG6 P46379.3.S113.p_BAG6 P46379-3_S113s _1_1_113_113 P46379-3 P46379-3 Isoform 3 of Large proline-rich protein BAG6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5917.5917.5 23.19 18.4 2.135 11 1 1 0 794.9799 3890.908 S113s TMT10 88 (R) APPQTHLPSGASSGTGSASATHGGGsPPGTRGPGASVHDR (N) APPQT(0.0)HLPS(0.0)GAS(0.0)S(0.0)GT(0.0)GS(0.0)AS(0.0)AT(0.0)HGGGS(0.99)PPGT(0.0)RGPGAS(0.0)VHDR s:Phosphorylated S BAG6 122796.4 3 3 590.1 264.42 HUMAN 1 13.7889 7.8535 SATIQNETPKKKPKL-p Q5HYJ3;T215-p SATIQNETPKKKPKL 0.635993227924701 0.00318868833041793 0.132666666666667 -0.875666666666667 3.66520595247983 37.4711167534764 0.132666666666667 -0.875666666666667 0.430010841039183 0.000179014547327554 0.852566809630887 -9.05005512323909 Q5HYJ3 FAM76B Q5HYJ3.T215.p_FAM76B Q5HYJ3_T215t _1_1_215_215 Q5HYJ3 Q5HYJ3|F5GX09|Q5HYJ3-2|Q5HYJ3-3 Protein FAM76B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7751.7751.2 12.72 8.37 4.743 4 1 1 0 857.4457 1633.9161 T215t TMT10 207 (K) SSATIQNEtPK (K) S(0.0)S(0.0)AT(0.0)IQNET(0.99)PK K:TMT10,t:Phosphorylated T FAM76B 39677.2 5 3 2297.1 89.3 HUMAN 1 3.6652 -37.4711 SATKQATSISSETKN-p P52701;S328-p SATKQATSISSETKN 0.682578198225975 0.199943877720488 0.059 -0.126333333333333 3.10881868082995 9.19779447282325 0.059 -0.126333333333333 0.488785295159404 0.120287514933097 0.742429247700306 -1.84192899675503 P52701 MSH6 P52701.S328.p_MSH6 P52701_S328s _1_1_328_328 P52701 P52701|P52701-3 DNA mismatch repair protein Msh6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8497.8497.2 12.53 12.53 1.133 5 1 1 0 795.4136 1509.8525 S328s TMT10 325 (K) QATsISSETK (N) QAT(0.0)S(0.99)IS(0.0)S(0.0)ET(0.0)K K:TMT10,s:Phosphorylated S MSH6 154608.6 1 11 875.1 209.27 HUMAN 1 3.1088 -9.1978 SATNKALSPVTSRTP-p Q96L91;S736-p SATNKALSPVTSRTP 0.222294886715951 0.00645623305637878 -0.203 -0.528 12.5679628752092 31.4898809709816 -0.203 -0.528 0.0553609727444644 0.000709597215943084 -2.43349973303318 -6.88691013097503 Q96L91 EP400 Q96L91.S736.p_EP400 Q96L91_S736s _1_1_736_736 Q96L91 Q96L91|Q96L91-2|Q96L91-5 E1A-binding protein p400 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9554.9554.2 12.04 5.45 1.568 3 1 1 0 570.306 1059.636 S736s TMT10 734 (K) ALsPVTSR (T) ALS(0.99)PVT(0.0)S(0.0)R s:Phosphorylated S EP400 344909.2 1 16 91.1 620.97 HUMAN 1 -12.568 -31.4899 SATRPSPSPERSSTG-p Q9UQ35;S353-p SATRPSPSPERSSTG 0.343164410890753 0.211365118645541 -0.16 0.178 8.6256428622712 8.88001144703226 -0.16 0.178 0.137225781818414 0.129419243024339 -1.74356011957399 1.78695895897994 Q9UQ35 SRRM2 Q9UQ35.S353.p_SRRM2 Q9UQ35_S353s _1_1_353_353 Q9UQ35 Q9UQ35|Q9UQ35-2|Q9UQ35-3 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13283.13283.4 18.88 16.15 1.762 8 1 1 0 799.4057 3114.6381 S353s TMT10 346 (K) SATRPSPsPERSSTGPEPPAPTPLLAER (H) S(0.0)AT(0.0)RPS(0.0)PS(0.99)PERS(0.0)S(0.0)T(0.0)GPEPPAPT(0.0)PLLAER s:Phosphorylated S SRRM2 300351.7 6 10 2.1 3310.34 HUMAN 1 -8.6256 8.88 SATSSQRSSPYGTLK-p Q5JSZ5;S1690-p SATSSQRSSPYGTLK 0.0645591710737108 0.032895332674453 -0.443 -0.268666666666667 25.734455854275 20.002190661472 -0.443 -0.268666666666667 0.00267026531488301 0.00999495708752681 -5.23222941662496 -3.87579327726851 Q5JSZ5 PRRC2B Q5JSZ5.S1690.p_PRRC2B Q5JSZ5_S1690sS1691s_2_2_1690_1691 Q5JSZ5 Q5JSZ5|Q5JSZ5-5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18574.18574.4 12.01 8.05 1.123 10 2 2 0 989.7375 3795.9678 S1690s S1691s TMT10 1681 (R) ESSATSSQRssPYGTLKPEEMSGPGLAEPK (A) ES(0.0)S(0.0)AT(0.0)S(0.0)S(0.0)QRS(0.99)S(0.99)PY(0.0)GT(0.0)LKPEEMS(0.0)GPGLAEPK K:TMT10,s:Phosphorylated S PRRC2B 244103.4 1 92 36.2 882.05 HUMAN 1 -25.7345 -20.0022 SATVLSGSIAGLEGG-p Q92614;S987-p SATVLSGSIAGLEGG 0.718947568381735 0.145860462851465 0.0916666666666667 -0.178666666666667 2.7043692855237 11.0138731992838 0.0916666666666667 -0.178666666666667 0.53649177907584 0.0791794863471017 0.659698990430881 -2.15756586442939 Q92614 MYO18A Q92614.S987.p_MYO18A Q92614_S987s _1_1_987_987 Q92614 Q92614|Q92614-4|A0A0D9SFK2|Q92614-3|Q92614-2|Q92614-5 Unconventional myosin-XVIIIa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22269.22269.3 8.95 8.95 1.149 5 1 1 0 860.7938 2500.4045 S987s TMT10 978 (R) AGSATVLSGsIAGLEGGSQLALRR (A) AGS(0.0)AT(0.0)VLS(0.0)GS(0.99)IAGLEGGS(0.0)QLALRR s:Phosphorylated S MYO18A 234309.1 1 5 783.1 225.59 HUMAN 1 2.7044 -11.0139 SAVAGNETPGASTKG-p A0A1B0GTW1;T1086-p SAVAGNETPGASTKG 0.179943033176446 0.0571526324813905 0.230333333333333 -0.408333333333333 14.6965255783167 16.5629190178576 0.230333333333333 -0.408333333333333 0.03391153450633 0.0220652116829606 2.82172570406682 -3.17469508922629 A0A1B0GTW1 NotFound A0A1B0GTW1.T1086.p_NotFound A0A1B0GTW1_T1086t _1_1_1086_1086 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8612.8612.3 15.17 15.17 8.129 5 1 1 0 709.3566 2046.0868 T1086t TMT10 1076 (K) SNPSAVAGNEtPGASTK (G) S(0.0)NPS(0.0)AVAGNET(0.99)PGAS(0.0)T(0.0)K K:TMT10,t:Phosphorylated T TJP2 141123.7 1 28 41.1 827.72 HUMAN 1 14.6965 -16.5629 SAVQASLSLPATPVG-p Q9GZM8;S215-p SAVQASLSLPATPVG 0.267086807703558 0.21738366251685 -0.268666666666667 -0.150666666666667 10.8646361568072 8.72191971212138 -0.268666666666667 -0.150666666666667 0.0819476274380598 0.134217154983561 -2.13241122025847 -1.75961510819859 Q9GZM8 NDEL1 Q9GZM8.S215.p_NDEL1 Q9GZM8_S215s _1_1_215_215 Q9GZM8 Q9GZM8-2|Q9GZM8-3|A6NIZ0 Nuclear distribution protein nudE-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25698.25698.3 15.2 15.2 1.147 4 1 1 0 770.7472 2230.2517 S215s TMT10 206 (K) MDSAVQASLsLPATPVGK (G) MDS(0.0)AVQAS(0.0)LS(0.99)LPAT(0.0)PVGK K:TMT10,s:Phosphorylated S NDEL1 38545.3 1 2 3012.1 63.32 HUMAN 1 -10.8646 -8.7219 SAVQRQGSGRESPSL-p Q8WWM7-3;S335-p SAVQRQGSGRESPSL 0.943309913754527 0.140790283126385 0.012 -0.228333333333333 0.498992593357928 11.2191009777192 0.012 -0.228333333333333 0.891457700203024 0.0755248553622333 0.143008772325088 -2.19352756106377 Q8WWM7 ATXN2L Q8WWM7.3.S335.p_ATXN2L Q8WWM7-3_S335s_1_1_335_335 Q8WWM7-3 Q8WWM7-3|H3BUF6|Q8WWM7-2|Q8WWM7-9 Isoform 3 of Ataxin-2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5223.5223.2 16.56 16.56 5.036 4 1 1 0 697.8079 1331.6662 Q333q S335s Hydrogen 333 (R) qGsGRESPSLASR (E) Q(1.0)GS(0.99)GRES(0.0)PS(0.0)LAS(0.0)R q:Pyroglutamic acid,s:Phosphorylated S ATXN2L 116093.7 2 11 184.1 476.17 HUMAN 1 0.499 -11.2191 SAVQRSKSCKVPGLG-p Q9C0C2;S1689-p SAVQRSKSCKVPGLG 0.372213196911415 0.778772570149873 -0.316333333333333 -0.058 7.96192220896951 1.50430499537071 -0.316333333333333 -0.058 0.159885021293132 0.707244372458718 -1.62855441545092 -0.395954063762826 Q9C0C2 TNKS1BP1 Q9C0C2.S1689.p_TNKS1BP1 Q9C0C2_S1689s _1_1_1689_1689 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20445.20445.5 13.42 13.42 13.415 2 1 1 0 655.1985 3191.9927 S1689s TMT10 1689 (K) sCKVPGLGKPLTLPPKPEK (S) S(0.99)CKVPGLGKPLT(0.0)LPPKPEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 4 70 4.1 2105.7 HUMAN 1 -7.9619 -1.5043 SAWAEGGSPRSTRSL-p Q8N9B5;S115-p SAWAEGGSPRSTRSL 0.40984377964096 0.763649661396316 0.125666666666667 -0.049 7.14133356623439 1.61802288518569 0.125666666666667 -0.049 0.193137516828973 0.688965874959871 1.48573093758231 -0.422398600903128 Q8N9B5 JMY Q8N9B5.S115.p_JMY Q8N9B5_S115s _1_1_115_115 Q8N9B5 Q8N9B5|Q8N9B5-2 Junction-mediating and -regulatory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8204.8204.2 15.9 11.74 9.195 3 1 1 0 707.3221 1333.6698 S115s TMT10 107 (R) SSAWAEGGsPR (S) S(0.0)S(0.0)AWAEGGS(0.99)PR s:Phosphorylated S JMY 112127.7 5 7 1120.1 175.11 HUMAN 1 7.1413 -1.618 SAWIRDYSSGGSSRT-p Q9C0C2;S962-p SAWIRDYSSGGSSRT 0.434135403741661 0.0201111058616564 -0.170666666666667 -0.562 6.67655960384792 23.2494394119303 -0.170666666666667 -0.562 0.214953261764006 0.0047321233734989 -1.40426922219643 -4.6084095936013 Q9C0C2 TNKS1BP1 Q9C0C2.S962.p_TNKS1BP1 Q9C0C2_S962s _1_1_962_962 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11326.11326.3 13.63 13.63 1.146 6 1 1 0 613.2857 1757.8768 S962s TMT10 955 (K) SAWIRDYsSGGSSR (T) S(0.0)AWIRDY(0.0)S(0.99)S(0.0)GGS(0.0)S(0.0)R s:Phosphorylated S TNKS1BP1 182819.3 1 37 4.1 2105.7 HUMAN 1 -6.6766 -23.2494 SAWSASKSGNWESSE-p Q9Y5X1;S116-p SAWSASKSGNWESSE 0.191102046396083 0.468982350473826 0.240666666666667 0.128 14.0354687692772 4.38318588000072 0.240666666666667 0.128 0.0394869075624966 0.36448647031082 2.6994329423818 0.989523553521946 Q9Y5X1 SNX9 Q9Y5X1.S116.p_SNX9 Q9Y5X1_S116s _1_1_116_116 Q9Y5X1 Q9Y5X1 Sorting nexin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15413.15413.3 17.04 17.04 4.487 3 1 1 0 824.0262 2390.0959 S116s TMT10 116 (K) sGNWESSEGWGAQPEGAGAQR (N) S(0.99)GNWES(0.0)S(0.0)EGWGAQPEGAGAQR s:Phosphorylated S SNX9 66989.8 1 1 5701.1 17.04 HUMAN 1 14.0355 4.3832 SAYGGLTSPGLSYSL-p P05787;S432-p SAYGGLTSPGLSYSL 0.909631856881929 0.48033283005708 0.0166666666666667 -0.0676666666666667 0.807470183862988 4.24989378013025 0.0166666666666667 -0.0676666666666667 0.830334306109308 0.37584659664294 0.224861737746315 -0.964434743944302 P05787 KRT8 P05787.S432.p_KRT8 P05787_S432s _1_1_432_432 P05787 P05787|P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.39271.39271.3 36.56 38.47 1.193 19 1 1 0 1345.6178 3954.8831 S432s TMT10 415 (K) TTSGYAGGLSSAYGGLTsPGLSYSLGSSFGSGAGSSSFSR (T) T(0.0)T(0.0)S(0.0)GY(0.0)AGGLS(0.0)S(0.0)AY(0.0)GGLT(0.0)S(0.99)PGLS(0.0)Y(0.0)S(0.0)LGS(0.0)S(0.0)FGS(0.0)GAGS(0.0)S(0.0)S(0.0)FS(0.0)R s:Phosphorylated S KRT8 53703.3 418 31 69.1 672.47 HUMAN 1 0.8075 -4.2499 SAYQEYDSDSDVPEE-p Q96JG6;S559-p SAYQEYDSDSDVPEE 0.376929733135012 0.0185971183561211 -0.238 0.407666666666667 7.83298859837458 23.8131575669121 -0.238 0.407666666666667 0.164702859838996 0.00415608329819678 -1.60617462368115 4.74377325828318 Q96JG6 VPS50 Q96JG6.S559.p_VPS50 Q96JG6_S559s _1_1_559_559 Q96JG6 Q96JG6 Syndetin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15507.15507.3 20.97 17.45 2.382 5 1 1 0 890.4182 2589.2721 S559s TMT10 552 (K) SAYQEYDsDSDVPEELKR (D) S(0.0)AY(0.0)QEY(0.0)DS(0.99)DS(0.0)DVPEELKR K:TMT10,s:Phosphorylated S VPS50 112027.8 3 4 1224.1 164.69 HUMAN 1 -7.833 23.8132 SCDSRLISDFEDTDG-p A0A1B0GTW1;S979-p SCDSRLISDFEDTDG 0.921287678498597 0.196057108702102 -0.0176666666666667 0.155 0.699254849338823 9.30674054761466 -0.0176666666666667 0.155 0.851284086681197 0.117307544790087 -0.196639572603361 1.86078063428952 A0A1B0GTW1 NotFound A0A1B0GTW1.S979.p_NotFound A0A1B0GTW1_S979s _1_1_979_979 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.33469.33469.4 21.44 21.44 3.547 7 1 1 0 999.1953 3913.8188 S979s TMT10 977 (R) LIsDFEDTDGEGGAYTDNELDEPAEEPLVSSITR (S) LIS(0.99)DFEDT(0.0)DGEGGAY(0.0)T(0.0)DNELDEPAEEPLVS(0.0)S(0.0)IT(0.0)R s:Phosphorylated S TJP2 141123.7 2 22 41.1 827.72 HUMAN 1 -0.6993 9.3067 SCDTVILSPTARAVR-p F8VWW7;S390-p SCDTVILSPTARAVR 0.377341542057701 0.795660816661041 0.122333333333333 0.065 7.82352742070722 1.38632562572931 0.122333333333333 0.065 0.165062058882567 0.726720543645589 1.60453168358774 0.368122769842095 F8VWW7 NotFound F8VWW7.S390.p_NotFound F8VWW7_S390s _1_1_390_390 F8VWW7 F8VWW7|Q8NCJ5 SPRY domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23874.23874.3 13.97 13.97 2.564 7 1 1 0 985.107 2873.3196 S390s TMT10 371 (R) DYILDSEGDSDDSCDTVILsPTAR (A) DY(0.0)ILDS(0.0)EGDS(0.0)DDS(0.0)CDT(0.0)VILS(0.99)PT(0.0)AR C:Carbamidomethylation,s:Phosphorylated S SPRYD3 54416.3 1 3 4786.1 26.64 HUMAN 1 7.8235 1.3863 SCDYASKSYDAVVFD-p Q5JS13-7;S38-p SCDYASKSYDAVVFD 0.039271926938295 0.335409260962587 -0.940333333333333 0.213 31.834771960834 6.28870142520876 -0.940333333333334 0.213 0.000655424699942865 0.235033548465939 -7.01037150348156 1.33550252275498 Q5JS13 RALGPS1 Q5JS13.7.S38.p_RALGPS1 Q5JS13-7_S38s _1_1_38_38 Q5JS13-7 Q5JS13-7|Q5JS13-2|Q5JS13-3|Q5JS13-4|Q5JS13-5|Q5JS13-6 Isoform 7 of Ras-specific guanine nucleotide-releasing factor RalGPS1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33538.33538.3 12.41 11.48 2.934 2 1 1 0 598.655 1713.9827 S38s TMT10 38 (K) sYDAVVFDVLK (V) S(0.99)Y(0.0)DAVVFDVLK K:TMT10,s:Phosphorylated S RALGPS1 60377.8 1 1 3444.1 50.89 HUMAN 1 -31.8348 6.2887 SCFPRPMTPRDRHEG-p Q14980;T2015-p SCFPRPMTPRDRHEG 0.0635370415880919 0.00479967872381982 0.509666666666667 0.765333333333333 25.9222202136353 33.8859400118391 0.509666666666667 0.765333333333333 0.00255727821302801 0.000408701280891888 5.28120314935086 7.69295727778366 Q14980 NUMA1 Q14980.T2015.p_NUMA1 Q14980_T2015t _1_1_2015_2015 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11482.11482.3 12.19 6.57 5.212 3 1 1 0 577.2753 1649.8453 T2015t TMT10 2006 (K) ATSCFPRPMtPR (D) AT(0.0)S(0.0)CFPRPMT(0.99)PR C:Carbamidomethylation,t:Phosphorylated T NUMA1 239339.3 4 33 31.1 900.97 HUMAN 1 25.9222 33.8859 SCGETFNSITKRRHH-p Q5JSP0;S547-p SCGETFNSITKRRHH 0.701391719781544 0.0192120044489922 0.0656666666666667 0.448 2.89754269072515 23.5862503031605 0.0656666666666667 0.448 0.513151651469533 0.00437900024695157 0.69952411189077 4.68897447253438 Q5JSP0 FGD3 Q5JSP0.S547.p_FGD3 Q5JSP0_S547s _1_1_547_547 Q5JSP0 Q5JSP0|Q5JSP0-3|Q5JSP0-2 FYVE, RhoGEF and PH domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14193.14193.3 11.72 11.72 2 4 1 1 0 594.6241 1701.8882 S547s TMT10 540 (K) SCGETFNsITK (R) S(0.0)CGET(0.0)FNS(0.99)IT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FGD3 80255.2 1 5 1834.1 112.05 HUMAN 1 2.8975 23.5863 SCGTDSQSENEASPV-p Q9H8U3;S124-p SCGTDSQSENEASPV 0.0360961121648541 0.00266411370065118 -0.708666666666667 -1.126 33.0856198768243 39.1182066341895 -0.708666666666667 -1.126 0.000491403236269274 0.000122512199393215 -7.42870774641737 -9.74172911641699 Q9H8U3 ZFAND3 Q9H8U3.S124.p_ZFAND3 Q9H8U3_S122sS124sS129s_3_3_122_129 Q9H8U3 Q9H8U3 AN1-type zinc finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6955.6955.2 9.69 9.69 2.115 5 3 3 0 1082.8906 1924.8756 S122s S124s S129s Hydrogen 117 (R) SCGTDsQsENEAsPVK (R) S(0.0)CGT(0.0)DS(0.99)QS(0.99)ENEAS(0.99)PVK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S ZFAND3 26039.5 3 3 4596.1 29.06 HUMAN 1 -33.0856 -39.1182 SCIVKSMSVDETDKS-p Q53SF7;S364-p SCIVKSMSVDETDKS 0.766023104823569 0.172330268584419 -0.0426666666666667 -0.192333333333333 2.22139221017743 10.039542738928 -0.0426666666666667 -0.192333333333333 0.599598833100945 0.0990936273349247 -0.557291279143326 -1.9877738127556 Q53SF7 COBLL1 Q53SF7.S364.p_COBLL1 Q53SF7_S364s _1_1_364_364 Q53SF7 A0A0D9SG04|Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4|A0A0B4J1Z0 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9756.9756.3 16.77 11.64 2.196 4 1 1 0 769.6841 2227.0735 S364s TMT10 362 (K) SMsVDETDKSPCEAGR (V) S(0.0)MS(0.99)VDET(0.0)DKS(0.0)PCEAGR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S COBLL1 132526.1 3 10 163.1 494.83 HUMAN 1 -2.2214 -10.0395 SCKGGYLSDGDSPEL-p Q5VT97;S622-p SCKGGYLSDGDSPEL 0.253932288685351 0.940373837726395 -0.168666666666667 -0.00766666666666665 11.3414967667281 0.380540998472851 -0.168666666666667 -0.00766666666666666 0.0734260766509031 0.91610636410038 -2.21604843505267 -0.110343339113234 Q5VT97 SYDE2 Q5VT97.S622.p_SYDE2 Q5VT97_S622s _1_1_622_622 Q5VT97 Q5VT97|Q5VT97-2 Rho GTPase-activating protein SYDE2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17530.17530.2 16.04 16.04 1.274 5 1 1 0 1039.51 1998.0432 S622s TMT10 618 (K) GGYLsDGDSPELTTK (A) GGY(0.0)LS(0.99)DGDS(0.0)PELT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S SYDE2 134825.4 2 3 2624.1 76.52 HUMAN 1 -11.3415 -0.3805 SCKIVSGSPISTPSP-p Q9ULM3;S465-p SCKIVSGSPISTPSP 0.203469268152067 0.166565653829041 0.232666666666667 0.187666666666667 13.4032505991285 10.2366643398315 0.232666666666667 0.187666666666667 0.0456746197113684 0.0946964211370179 2.58399078519471 2.02201920387766 Q9ULM3 YEATS2 Q9ULM3.S465.p_YEATS2 Q9ULM3_S465s _1_1_465_465 Q9ULM3 Q9ULM3 YEATS domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21132.21132.2 15.44 10.49 1.668 6 1 1 0 1001.0375 1921.0956 S465s TMT10 461 (K) IVSGsPISTPSPSPLPR (T) IVS(0.0)GS(0.99)PIS(0.0)T(0.0)PS(0.0)PS(0.0)PLPR s:Phosphorylated S YEATS2 151691.8 2 5 1060.1 182.14 HUMAN 1 13.4033 10.2367 SCLLLPPTPVRGGQK-p O75691;T2064-p SCLLLPPTPVRGGQK 0.411053514702822 0.0956185527756798 0.132333333333333 -0.184666666666667 7.12393402706222 13.4815402422212 0.132333333333333 -0.184666666666667 0.193912853536364 0.0448586268858562 1.48269024971552 -2.59672247741822 O75691 UTP20 O75691.T2064.p_UTP20 O75691_T2064t _1_1_2064_2064 O75691 O75691 Small subunit processome component 20 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26974.26974.3 12.73 12.73 6.186 2 1 1 0 666.3657 1917.1193 T2064t TMT10 2053 (R) LPPQSCLLLPPtPVR (G) LPPQS(0.0)CLLLPPT(0.99)PVR C:Carbamidomethylation,t:Phosphorylated T UTP20 321004.1 2 4 1054.1 182.86 HUMAN 1 7.1239 -13.4815 SCLPLGMSQEDNQLK-p E9PL17;S355-p SCLPLGMSQEDNQLK 0.595696306545859 0.586958482236644 -0.0863333333333333 -0.0553333333333333 4.15209215607407 3.12817178878432 -0.0863333333333333 -0.0553333333333333 0.384406554673485 0.486612007350959 -0.94609277291872 -0.74622001166566 E9PL17 NotFound E9PL17.S355.p_NotFound E9PL17_S355s _1_1_355_355 E9PL17 E9PL17|Q92989|Q92989-2 Polyribonucleotide 5'-hydroxyl-kinase Clp1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27720.27720.3 17.41 16.17 2.326 3 1 1 0 1003.5012 2928.5211 S355s TMT10 340 (K) VGAPTIPDSCLPLGMsQEDNQLK (L) VGAPT(0.0)IPDS(0.0)CLPLGMS(0.99)QEDNQLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CLP1 49395.4 2 1 5658.1 17.41 HUMAN 1 -4.1521 -3.1282 SCPHGRLTEEVYKKL-p O15050;T1325-p SCPHGRLTEEVYKKL 0.488442737073134 0.109724717737801 0.102666666666667 0.176 5.73215668660809 12.6748319330856 0.102666666666667 0.176 0.267167933539712 0.0540153017653856 1.23669885249441 2.4513302218334 O15050 TRANK1 O15050.T1325.p_TRANK1 O15050_T1325t _1_1_1325_1325 O15050 O15050 TPR and ankyrin repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30927.30927.3 7.15 7.15 1.493 4 1 1 0 906.7919 2638.3699 T1325t TMT10 1312 (K) GSFEALSCPHGRLtEEVYK (K) GS(0.0)FEALS(0.0)CPHGRLT(0.99)EEVY(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T TRANK1 340551 1 1 7247.1 7.15 HUMAN 1 5.7322 12.6748 SCPIKEDSFLQRYSS-p P00533;S1064-p SCPIKEDSFLQRYSS 0.517317056020968 0.0481919543404315 -0.0906666666666667 -0.664 5.28604097918696 17.6099616109419 -0.0906666666666667 -0.664 0.296071021492693 0.0173381932362158 -1.15622778379778 -3.38106201186033 P00533 EGFR P00533.S1064.p_EGFR P00533_S1064s _1_1_1064_1064 P00533 P00533|E9PFD7 Epidermal growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18135.18135.3 13.15 13.15 13.147 2 1 1 0 810.7457 2350.2589 S1064s TMT10 1053 (R) NGLQSCPIKEDsFLQR (Y) NGLQS(0.0)CPIKEDS(0.99)FLQR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EGFR 137698.3 1 5 521.2 283.33 HUMAN 1 -5.286 -17.61 SCPKKPLSPPKKKVS-p Q13029;S1484-p SCPKKPLSPPKKKVS 0.232221202833204 0.00784647848245682 -0.187333333333333 -0.446 12.1942515069449 30.0318732569598 -0.187333333333333 -0.446 0.060335768579 0.000992687776714334 -2.3668374971259 -6.43161815232848 Q13029 PRDM2 Q13029.S1484.p_PRDM2 Q13029_S1484s _1_1_1484_1484 Q13029 Q13029|Q13029-2|Q13029-3|Q13029-5 PR domain zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11266.11266.3 8.58 1.05 99 1 1 1 0 511.9843 1453.9709 S1484s TMT10 1481 (K) KPLsPPK (K) KPLS(1.0)PPK K:TMT10,s:Phosphorylated S PRDM2 191251.2 4 8 1106.1 176.67 HUMAN 1 -12.1943 -30.0319 SCPLSDLSENVESVV-p Q99590;S572-p SCPLSDLSENVESVV 0.536999686617219 0.160990496583212 0.11 0.141666666666667 4.99537989166304 10.4308770301103 0.11 0.141666666666667 0.316564354207146 0.0905549712421846 1.10321137379311 2.05580611853078 Q99590 SCAF11 Q99590.S572.p_SCAF11 Q99590_S572s _1_1_572_572 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30511.30511.3 16.67 16.67 1.166 5 1 1 0 1087.1997 3179.6182 S572s TMT10 560 (K) VYQPVSCPLSDLsENVESVVNEEK (I) VY(0.0)QPVS(0.0)CPLS(0.0)DLS(0.99)ENVES(0.0)VVNEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SCAF11 166418 6 7 120.1 549.85 HUMAN 1 4.9954 10.4309 SCPPPGGSWGSGRSS-p Q9C075;S58-p SCPPPGGSWGSGRSS 0.306735184126758 0.00993953167813799 0.206333333333333 0.414666666666667 9.60226314151578 28.1540286840769 0.206333333333333 0.414666666666667 0.109590696188116 0.00152966782411895 1.9126849559178 5.88098483535156 Q9C075 KRT23 Q9C075.S58.p_KRT23 Q9C075_S58s _1_1_58_58 Q9C075 Q9C075 Keratin, type I cytoskeletal 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8637.8637.2 11.57 5.75 2.301 3 1 1 0 805.8553 1530.7321 S58s TMT10 51 (R) SCPPPGGsWGSGR (S) S(0.0)CPPPGGS(0.99)WGS(0.0)GR C:Carbamidomethylation,s:Phosphorylated S KRT23 48301.4 5 5 2033.1 101.49 HUMAN 1 9.6023 28.154 SCQEEMISLGDGDIR-p Q15003;S408-p SCQEEMISLGDGDIR 0.69342676446775 0.154361497553468 0.058 -0.178333333333333 2.98292641716379 10.6723626335511 0.058 -0.178333333333333 0.503161448018834 0.0856571729317882 0.716942323515325 -2.0978906690905 Q15003 NCAPH Q15003.S408.p_NCAPH Q15003_S408s _1_1_408_408 Q15003 Q15003|E9PHA2|Q15003-2 Condensin complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22073.22073.3 15.66 15.66 4.596 3 1 1 0 1130.8553 3310.5907 S408s TMT10 392 (R) SWKEPCQVQSCQEEMIsLGDGDIR (T) S(0.0)WKEPCQVQS(0.0)CQEEMIS(0.99)LGDGDIR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NCAPH 83360.5 2 12 558.1 272.98 HUMAN 1 2.9829 -10.6724 SCRDLSSSPPGPYGQ-p O43741;S184-p SCRDLSSSPPGPYGQ 0.621729850184917 0.353990834936428 0.0903333333333333 0.109 3.83779903899076 5.98011670057931 0.0903333333333333 0.109 0.413256883385831 0.252341296417915 0.88599496445472 1.28071698588477 O43741 PRKAB2 O43741.S184.p_PRKAB2 O43741_S184s _1_1_184_184 O43741 O43741|O43741-2 5'-AMP-activated protein kinase subunit beta-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23059.23059.2 15.31 10.01 1.109 5 1 1 0 1156.0171 2231.064 S184s TMT10 180 (R) DLSSsPPGPYGQEMYAFR (S) DLS(0.0)S(0.0)S(0.99)PPGPY(0.0)GQEMY(0.0)AFR s:Phosphorylated S PRKAB2 30415.8 8 4 1446.1 140.95 HUMAN 1 3.8378 5.9801 SCRKLYRSINRTGTA-p Q9H2F5;S552-p SCRKLYRSINRTGTA 0.059919731852883 0.618723381878048 -0.645666666666667 0.0606666666666667 26.7380112842761 2.83350638587158 -0.645666666666667 0.0606666666666667 0.00211933139459681 0.520774081255297 -5.49786247760616 0.686294521558162 Q9H2F5 EPC1 Q9H2F5.S552.p_EPC1 Q9H2F5_S552s _1_1_552_552 Q9H2F5 Q9H2F5 Enhancer of polycomb homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7680.7680.3 11.47 4.37 7.358 2 1 1 0 410.8901 1150.6894 S552s TMT10 549 (K) LYRsINR (T) LY(0.0)RS(0.99)INR s:Phosphorylated S EPC1 94032.2 1 5 2237.1 92.28 HUMAN 1 -26.738 2.8335 SCRNLRGSPKLPDFL-p O75385;S605-p SCRNLRGSPKLPDFL 0.0333915231240893 0.00143774220577793 -0.806 -0.971333333333333 34.3885239454862 45.8422646809205 -0.806 -0.971333333333333 0.000364038742448044 2.60479489409338e-05 -7.88673792808717 -13.0993079156249 O75385 ULK1 O75385.S605.p_ULK1 O75385_S605s _1_1_605_605 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18876.18876.4 12.72 12.72 99 1 1 1 0 545.5598 2099.249 S605s TMT10 601 (R) NLRGsPKLPDFLQR (N) NLRGS(1.0)PKLPDFLQR K:TMT10,s:Phosphorylated S ULK1 113656.3 3 13 351.1 351.01 HUMAN 1 -34.3885 -45.8423 SCRRNEESDDDLDFD-p Q96MD7-1;S137-p SCRRNEESDDDLDFD 0.815726627142776 0.0699911058958282 0.033 0.242333333333333 1.69783884687006 15.3562570069225 0.033 0.242333333333333 0.67641949416056 0.0291322681844238 0.44079546279443 2.94356135369677 Q96MD7 C9orf85 Q96MD7.1.S137.p_C9orf85 Q96MD7-1_S137s _1_1_137_137 Q96MD7-1 Q96MD7-1 Isoform 2 of Uncharacterized protein C9orf85 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22177.22177.3 15.46 12.9 7.343 2 1 1 0 1068.7667 3124.3123 S137s TMT10 133 (R) RNEEsDDDLDFDIDLEDTGGDHQMN (-) RNEES(0.99)DDDLDFDIDLEDT(0.0)GGDHQMN s:Phosphorylated S C9orf85 18834 2 1 5905.1 15.46 HUMAN 1 1.6978 15.3563 SCRRSLLSPKKTQRR-p Q9P0U3;S170-p SCRRSLLSPKKTQRR 0.544611402901639 0.00341447528451321 -0.0806666666666667 -0.684 4.87337093341892 36.8784453073239 -0.0806666666666667 -0.684 0.325583889209714 0.000205189658780518 -1.08080076409459 -8.8121524299912 Q9P0U3 SENP1 Q9P0U3.S170.p_SENP1 Q9P0U3_S170s _1_1_170_170 Q9P0U3 Q9P0U3|Q9P0U3-2 Sentrin-specific protease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14693.14693.2 10.43 10.43 4.241 2 1 1 0 770.4769 1459.9815 S170s TMT10 167 (R) SLLsPKK (T) S(0.0)LLS(0.99)PKK K:TMT10,s:Phosphorylated S SENP1 74049.8 3 9 1420.1 144.33 HUMAN 1 -4.8734 -36.8784 SCRSLSLSSSKSNSQ-p Q8N961;S33-p SCRSLSLSSSKSNSQ 0.0869195095593095 0.00971111834999003 -0.463666666666667 -0.677666666666667 22.6328307796598 28.3417369838506 -0.463666666666667 -0.677666666666667 0.00545402245966514 0.00146496180451376 -4.46816136428475 -5.93430675585081 Q8N961 ABTB2 Q8N961.S33.p_ABTB2 Q8N961_S33s _1_1_33_33 Q8N961 Q8N961 Ankyrin repeat and BTB/POZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14971.14971.2 11.41 3.85 1.133 5 1 1 0 673.87 1266.7669 S33s TMT10 29 (R) SLSLsSSK (S) S(0.0)LS(0.0)LS(0.99)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ABTB2 114795.2 1 1 3088.1 61.05 HUMAN 1 -22.6328 -28.3417 SCRYRRLTGDSGIEL-p A8MX15;T243-p SCRYRRLTGDSGIEL 0.108274227113564 0.543130621577017 -0.301666666666667 0.0613333333333333 20.2618742030208 3.56532379633384 -0.301666666666667 0.0613333333333334 0.00941483210637597 0.440015140465262 -3.9353781450694 0.832941930795223 A8MX15 NotFound A8MX15.T243.p_NotFound A8MX15_T243tS246s_2_2_243_246 A8MX15 A8MX15|Q96G27|B8ZZ95 HCG2039828, isoform CRA_g HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20497.20497.4 15.63 11.11 5.724 3 2 2 0 762.608 2887.4694 T243t S246s TMT10 241 (R) RLtGDsGIELCPCPASGEGEPVK (E) RLT(0.99)GDS(0.99)GIELCPCPAS(0.0)GEGEPVK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S WBP1 33794.2 2 3 3640.1 46.28 HUMAN 1 -20.2619 3.5653 SCSDPQPSPEMKPHS-p Q9H000;S139-p SCSDPQPSPEMKPHS 0.348798222753359 0.0933407931117027 -0.128666666666667 -0.180333333333333 8.50102811668975 13.621835632005 -0.128366173981772 -0.180333333333333 0.141220319049192 0.0434326608590431 -1.7219846260979 -2.62222354110284 Q9H000 MKRN2 Q9H000.S139.p_MKRN2 Q9H000_S139s _1_1_139_139 Q9H000 Q9H000|C9J494|Q9H000-2 Probable E3 ubiquitin-protein ligase makorin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16519.16519.4 25.21 25.21 4.871 8 1 1 0 1078.0304 4229.1396 S139s TMT10 121 (R) KTQPSMVSNPGSCSDPQPsPEMKPHSYLDAIR (S) KT(0.0)QPS(0.0)MVS(0.0)NPGS(0.0)CS(0.0)DPQPS(0.99)PEMKPHS(0.0)Y(0.0)LDAIR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MKRN2 48308.8 15 1 3731.1 44.33 HUMAN 1 -8.501 -13.6218 SCSPDRRSPSPKESG-p E9PGC8;S2328-p SCSPDRRSPSPKESG 0.278750676864012 0.78326174899117 0.180333333333333 -0.0313333333333333 10.4891408684899 1.46900571581343 0.180333333333333 -0.0313333333333333 0.0893482216995459 0.713016251089635 2.06683408808527 -0.387670284603055 E9PGC8 NotFound E9PGC8.S2328.p_NotFound E9PGC8_S2328s_1_1_2328_2328 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16444.16444.4 11.57 11.57 1.206 5 1 1 0 743.8836 2891.5562 N2316n S2328s TMT10 2310 (K) GPSPPLnGNILSCSPDRRsPSPK (E) GPS(0.0)PPLN(0.99)GN(0.0)ILS(0.0)CS(0.0)PDRRS(0.99)PS(0.0)PK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S MAP1A 332906.7 1 36 20.1 1016.98 HUMAN 1 10.4891 -1.469 SCSPSPVSPQVQPQA-p Q9NQW6;S102-p SCSPSPVSPQVQPQA 0.865822564736223 0.0682046325220197 0.027 -0.213333333333333 1.21679751614594 15.5141825380763 0.027 -0.213333333333333 0.755649237382555 0.0280919409076711 0.327409277494459 -2.97343193570423 Q9NQW6 ANLN Q9NQW6.S102.p_ANLN Q9NQW6_S102s _1_1_102_102 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32481.32734.3 25.63 21.66 2.301 8 1 1 0 1221.2635 3581.8141 S102s TMT10 95 (K) SCSPSPVsPQVQPQAADTISDSVAVPASLLGMR (R) S(0.0)CS(0.0)PS(0.0)PVS(0.99)PQVQPQAADT(0.0)IS(0.0)DS(0.0)VAVPAS(0.0)LLGMR C:Carbamidomethylation,s:Phosphorylated S ANLN 125566 6 13 68.1 675.08 HUMAN 1 1.2168 -15.5142 SCSSSRRSGGDGGDE-p Q96DT7;S210-p SCSSSRRSGGDGGDE 0.26669435938696 0.0615870424439535 0.444666666666667 -0.239 10.8789827057238 16.1183456604271 0.444666666666667 -0.239 0.0816773670559263 0.024443614956427 2.13492132965495 -3.08874445015195 Q96DT7 ZBTB10 Q96DT7.S210.p_ZBTB10 Q96DT7_S210s _1_1_210_210 Q96DT7 Q96DT7 Zinc finger and BTB domain-containing protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15714.15714.5 20.91 20.91 3.766 3 1 1 0 707.7441 3454.7239 S210s TMT10 210 (R) sGGDGGDEVEGSGVGAGEGETVQHFPLARPK (S) S(0.99)GGDGGDEVEGS(0.0)GVGAGEGET(0.0)VQHFPLARPK K:TMT10,s:Phosphorylated S ZBTB10 96033.4 1 1 3046.1 62.23 HUMAN 1 10.879 -16.1183 SCVPRPPSHGGPTRD-p Q9UN79;S324-p SCVPRPPSHGGPTRD 0.693977037937363 0.232259852047911 -0.0573333333333333 0.137666666666667 2.97574725725494 8.35152318637181 -0.0573333333333333 0.137666666666667 0.503993893272337 0.146166443991365 -0.71548197443688 1.69552975777782 Q9UN79 SOX13 Q9UN79.S324.p_SOX13 Q9UN79_S324s _1_1_324_324 Q9UN79 Q9UN79 Transcription factor SOX-13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7858.7858.4 15.14 15.14 1.984 4 1 1 0 508.7424 1951.9792 S324s TMT10 315 (K) MSSCVPRPPsHGGPTR (D) MS(0.0)S(0.0)CVPRPPS(0.99)HGGPT(0.0)R C:Carbamidomethylation,s:Phosphorylated S SOX13 69740.6 2 6 1036.1 185.73 HUMAN 1 -2.9757 8.3515 SCVRRRYSDFEWLKN-p A0A087X0R6;S73-p SCVRRRYSDFEWLKN 0.204653309018144 0.0198070948003416 -0.251666666666667 0.357333333333333 13.3352249359976 23.3700308063216 -0.251666666666667 0.357333333333333 0.046395675944904 0.00460253308800817 -2.57165178999504 4.63714929843216 A0A087X0R6 NotFound A0A087X0R6.S73.p_NotFound A0A087X0R6_S73s _1_1_73_73 A0A087X0R6 Q9UMY4|A0A087X0R6|Q9UMY4-2|Q9UMY4-3 Sorting nexin-12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23210.23210.3 13.83 13.83 11.647 2 1 1 0 594.6393 1701.9365 S73s TMT10 71 (R) RYsDFEWLK (N) RY(0.0)S(0.99)DFEWLK K:TMT10,s:Phosphorylated S SNX12 20053.4 10 4 2063.1 99.88 HUMAN 1 -13.3352 23.37 SDACLLGSGSKHRGA-p O60347;S113-p SDACLLGSGSKHRGA 0.398383907271419 0.00967298248282981 0.145666666666667 -0.482666666666667 7.37766764436421 28.3778841406245 0.145666666666667 -0.482666666666667 0.182908225140795 0.00145281925092733 1.52697332322878 -5.94461764954547 O60347 TBC1D12 O60347.S113.p_TBC1D12 O60347_S113s _1_1_113_113 O60347 O60347 TBC1 domain family member 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14364.14364.3 13.18 13.18 2.394 3 1 1 0 544.9404 1552.8405 S113s TMT10 106 (R) SDACLLGsGSK (H) S(0.0)DACLLGS(0.99)GS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TBC1D12 86422.8 2 2 2018.1 102.13 HUMAN 1 7.3777 -28.3779 SDADDSDSDAVSDKS-p Q96ST2;S422-p SDADDSDSDAVSDKS 0.152381872383781 0.00964718606683653 0.531 -0.582666666666667 16.4378916174168 28.4099871450753 0.531 -0.582666666666667 0.0227096707758136 0.00144211962012888 3.15272811377124 -5.95378655454017 Q96ST2 IWS1 Q96ST2.S422.p_IWS1 Q96ST2_S415sS420sS422s_3_3_415_422 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12116.12116.4 10.15 10.15 10.146 5 3 3 0 745.8358 2740.4204 S415s S420s S422s TMT10 413 (R) VVsDADDsDsDAVSDKSGKR (E) VVS(0.99)DADDS(0.99)DS(0.99)DAVS(0.0)DKS(0.0)GKR K:TMT10,s:Phosphorylated S IWS1 92010 3 22 230.1 422.87 HUMAN 1 16.4379 -28.41 SDAEYTNSPLVPTFC-p Q8IX90;S283-p SDAEYTNSPLVPTFC 0.472567058699638 0.704737453630861 -0.0976666666666667 -0.0613333333333333 6.00047381846787 2.08772269086562 -0.0976666666666667 -0.0613333333333334 0.251161239780486 0.618340554259457 -1.28464799256911 -0.528080080932769 Q8IX90 SKA3 Q8IX90.S283.p_SKA3 Q8IX90_S283s _1_1_283_283 Q8IX90 Q8IX90|Q8IX90-3 Spindle and kinetochore-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26383.26383.3 12.8 12.8 1.2 6 1 1 0 912.4567 2655.374 S283s TMT10 276 (K) SDAEYTNsPLVPTFCTPGLK (I) S(0.0)DAEY(0.0)T(0.0)NS(0.99)PLVPT(0.0)FCT(0.0)PGLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SKA3 46872 1 7 966.1 193.88 HUMAN 1 -6.0005 -2.0877 SDANLSRYGIHPAKF-p A3KMH1;Y1837-p SDANLSRYGIHPAKF 0.744559708906949 0.0110367334761063 0.0733333333333333 0.43 2.42988179909246 27.4195823616064 0.0733333333333333 0.43 0.571494190683155 0.00181151428814196 0.602029830546069 5.67586418567636 A3KMH1 VWA8 A3KMH1.Y1837.p_VWA8 A3KMH1_Y1837y _1_1_1837_1837 A3KMH1 A3KMH1|A3KMH1-3 von Willebrand factor A domain-containing protein 8 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8719.8719.3 9.63 7.56 99 1 1 1 0 441.9128 1243.7563 Y1837y TMT10 1837 (R) yGIHPAK (F) Y(1.0)GIHPAK K:TMT10,y:Phosphorylated Y VWA8 215847.5 2 1 353.1 9.63 HUMAN 1 2.4299 27.4196 SDAPAYRTPPSRQGR-p Q5JTV8;T47-p SDAPAYRTPPSRQGR 0.349266178256773 0.0425422944439411 0.130666666666667 -0.465 8.48762417179256 18.3688449804796 0.130666666666667 -0.465 0.141656850843407 0.0145584621587468 1.71966360967241 -3.53433232122178 Q5JTV8 TOR1AIP1 Q5JTV8.T47.p_TOR1AIP1 Q5JTV8_T47t _1_1_47_47 Q5JTV8 J3KN66|Q5JTV8-3|Q5JTV8-2 Torsin-1A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8667.8667.3 15.81 15.81 2 5 1 1 0 784.3835 2271.1679 T47t TMT10 32 (R) LAPQNGGSSDAPAYRtPPSR (Q) LAPQNGGS(0.0)S(0.0)DAPAY(0.0)RT(0.99)PPS(0.0)R t:Phosphorylated T TOR1AIP1 66418.4 1 3 585.1 265.22 HUMAN 1 8.4876 -18.3688 SDDDGGDSPVQDIDT-p O75446;S138-p SDDDGGDSPVQDIDT 0.876965772598429 0.00823648400774715 -0.0263333333333333 0.440666666666667 1.12007805338787 29.6544421198641 -0.0263333333333334 0.440666666666667 0.772666698252106 0.00108281880146794 -0.303733330185635 6.31780934818866 O75446 SAP30 O75446.S138.p_SAP30 O75446_S131sS138s_2_2_131_138 O75446 O75446 Histone deacetylase complex subunit SAP30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26669.27081.4 20.47 20.47 3.43 5 2 2 0 1041.7461 4004.0249 S131s S138s TMT10 128 (K) RKGsDDDGGDsPVQDIDTPEVDLYQLQVNTLR (R) RKGS(0.99)DDDGGDS(0.99)PVQDIDT(0.0)PEVDLY(0.0)QLQVNT(0.0)LR K:TMT10,s:Phosphorylated S SAP30 23591.1 8 2 2714.1 72.99 HUMAN 1 -1.1201 29.6544 SDDEAGQS_______-p Q2VPK5;S515-p SDDEAGQS_______ 0.452515170667867 0.991714713219151 0.108333333333333 -0.00233333333333333 6.35357598687242 0.0531550906242047 0.108333333333333 -0.00233333333333329 0.231548728932372 0.98783518502228 1.34731467572585 -0.0159625517464201 Q2VPK5 CTU2 Q2VPK5.S515.p_CTU2 Q2VPK5_S515s _1_1_515_515 Q2VPK5 H3BSW6|Q2VPK5|Q2VPK5-3 Cytoplasmic tRNA 2-thiolation protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28735.28735.2 19.78 19.78 2.384 2 1 1 0 1408.6216 2736.262 S515s TMT10 494 (R) AWGLQEIRDCLIEDSDDEAGQs (-) AWGLQEIRDCLIEDS(0.0)DDEAGQS(0.99) C:Carbamidomethylation,s:Phosphorylated S CTU2 57247.3 1 5 3167.1 58.81 HUMAN 1 6.3536 -0.0532 SDDIFGLSTDSLSRL-p Q96QF0;S154-p SDDIFGLSTDSLSRL 0.295243174589512 0.478426535172176 0.175 -0.0726666666666667 9.9780918718614 4.27086120309226 0.175 -0.0726666666666667 0.100505727800494 0.374036409744247 1.97790450587345 -0.968391372203027 Q96QF0 RAB3IP Q96QF0.S154.p_RAB3IP Q96QF0_S154s _1_1_154_154 Q96QF0 Q96QF0|Q96QF0-2|Q96QF0-4|Q96QF0-3|J3KPG1|Q96QF0-6|Q96QF0-7|Q96QF0-5 Rab-3A-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29779.29779.3 24.44 24.44 1.117 8 1 1 0 1392.9559 4096.8879 S154s TMT10 126 (K) DNYNAEREFLQGATITEACDGSDDIFGLsTDSLSR (L) DNY(0.0)NAEREFLQGAT(0.0)IT(0.0)EACDGS(0.0)DDIFGLS(0.99)T(0.0)DS(0.0)LS(0.0)R C:Carbamidomethylation,s:Phosphorylated S RAB3IP 53704.9 8 1 1620.1 126.94 HUMAN 1 9.9781 -4.2709 SDDISRDSDGMDEQC-p P46100;S213-p SDDISRDSDGMDEQC 0.146016916633759 0.0616566648286297 0.322666666666667 0.398 17.019718213216 16.110905896909 0.322666666666667 0.398 0.0198622378693309 0.0244855244386321 3.26651948400322 3.08731418075925 P46100 ATRX P46100.S213.p_ATRX P46100_S213s _1_1_213_213 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13493.13493.3 17.94 17.94 2.559 5 1 1 0 884.6812 2572.0588 S213s TMT10 203 (K) YYMSDDISRDsDGMDEQCR (W) Y(0.0)Y(0.0)MS(0.0)DDIS(0.0)RDS(0.99)DGMDEQCR C:Carbamidomethylation,s:Phosphorylated S ATRX 285034.2 3 6 18.1 1035.36 HUMAN 1 17.0197 16.1109 SDDKHFGSGDLMDPE-p Q9P2F8;S1244-p SDDKHFGSGDLMDPE 0.145152146047681 0.661302171191657 -0.467333333333333 -0.042 17.0859100104609 2.45899680246318 -0.467333333333333 -0.042 0.0195618083144921 0.567675720386629 -3.27957471071714 -0.608133901695423 Q9P2F8 SIPA1L2 Q9P2F8.S1244.p_SIPA1L2 Q9P2F8_S1244s _1_1_1244_1244 Q9P2F8 Q9P2F8|Q9P2F8-2 Signal-induced proliferation-associated 1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34156.34156.3 24.49 24.49 17.99 3 1 1 0 882.123 2564.3835 S1244s TMT10 1241 (K) HFGsGDLMDPELLGLTYIK (G) HFGS(0.99)GDLMDPELLGLT(0.0)Y(0.0)IK K:TMT10,s:Phosphorylated S SIPA1L2 192488.1 2 8 322.1 363.46 HUMAN 1 -17.0859 -2.459 SDDNEEESDEVEDND-p P42568;S419-p SDDNEEESDEVEDND 0.263054148508799 0.579863297192307 -0.274666666666667 0.0611666666666667 10.9987749712112 3.19359985582138 -0.274666666666667 0.0611666666666667 0.0794552325116389 0.479335963571505 -2.15589473064215 0.759357040661114 P42568 MLLT3 P42568.S419.p_MLLT3 P42568_S412sS419s_2_2_412_419 P42568 P42568|P42568-2|B1APT5|A0A0D9SF09 Protein AF-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.8782.8782.4 14.53 14.53 5.479 3 2 2 0 956.6182 3662.5106 S412s N415n S419s TMT10 409 (K) DLHsDDnEEEsDEVEDNDNDSEMERPVNR (G) DLHS(0.99)DDN(0.99)EEES(0.99)DEVEDN(0.0)DN(0.0)DS(0.0)EMERPVN(0.0)R s:Phosphorylated S,n:Deamidated MLLT3 63692.6 5 5 2734.1 72.29 HUMAN 2 -10.9988 3.1936 SDDSKAASPPLKGSV-p Q8TDB6;S539-p SDDSKAASPPLKGSV 0.187254795627764 0.39420227799623 -0.465333333333333 -0.0813333333333333 14.2830466921455 5.37436061552144 -0.465333333333333 -0.0813333333333333 0.0372988404634177 0.290110827919819 -2.74503601337946 -1.17198850493775 Q8TDB6 DTX3L Q8TDB6.S539.p_DTX3L Q8TDB6_S539s _1_1_539_539 Q8TDB6 Q8TDB6 E3 ubiquitin-protein ligase DTX3L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11265.11265.2 10.56 4.18 99 1 1 1 0 611.3534 1141.7345 S539s TMT10 537 (K) AAsPPLK (G) AAS(1.0)PPLK K:TMT10,s:Phosphorylated S DTX3L 84636.9 3 6 2047.1 100.69 HUMAN 1 -14.283 -5.3744 SDDSKSSSPELVTHL-p Q07960;S51-p SDDSKSSSPELVTHL 0.193883926313618 0.210624420098535 -0.457 0.179 13.908495556294 8.89880097333825 -0.457 0.179 0.0406584149980642 0.128860526857904 -2.67613345069271 1.79020879153448 Q07960 ARHGAP1 Q07960.S51.p_ARHGAP1 Q07960_S51s _1_1_51_51 Q07960 Q07960 Rho GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22429.22429.5 21.84 15.87 1.108 8 1 1 0 759.1818 3711.9109 S51s TMT10 44 (K) SDDSKSSsPELVTHLKWDDPYYDIAR (H) S(0.0)DDS(0.0)KS(0.0)S(0.0)S(0.99)PELVT(0.0)HLKWDDPY(0.0)Y(0.0)DIAR K:TMT10,s:Phosphorylated S ARHGAP1 50491.8 12 5 951.1 196.28 HUMAN 1 -13.9085 8.8988 SDEEDEDSDFGEEQR-p Q9HCL2;S695-p SDEEDEDSDFGEEQR 0.198278297009499 0.027590049228953 -0.263333333333333 -0.381333333333333 13.6996057994917 21.1416777703852 -0.263333333333333 -0.381333333333333 0.0426618240337803 0.00768833366503263 -2.63792930384153 -4.12422061427968 Q9HCL2 GPAM Q9HCL2.S695.p_GPAM Q9HCL2_S695s _1_1_695_695 Q9HCL2 Q9HCL2|Q5VW52 Glycerol-3-phosphate acyltransferase 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21614.21614.5 15.44 15.44 5.147 4 1 1 0 868.8123 4260.0646 S695s TMT10 679 (K) KLPEPLSWRSDEEDEDsDFGEEQRDCYLK (V) KLPEPLS(0.0)WRS(0.0)DEEDEDS(0.99)DFGEEQRDCY(0.0)LK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GPAM 94820.1 3 6 2157.1 95.28 HUMAN 1 -13.6996 -21.1417 SDEEDPDSMEAPTRI-p Q9H6Y2;S21-p SDEEDPDSMEAPTRI 0.611098814783857 0.0914364449085443 0.078 0.319 3.96296343902172 13.7396828811374 0.078 0.319 0.401516739573781 0.0422699478365774 0.910043400616367 2.64369672465132 Q9H6Y2 WDR55 Q9H6Y2.S21.p_WDR55 Q9H6Y2_S14sS21s_2_2_14_21 Q9H6Y2 Q9H6Y2|D6RGJ8 WD repeat-containing protein 55 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6266.6266.3 15.32 15.32 2.59 4 2 2 0 1043.3928 2952.2309 S14s S21s M22m TMT10 4 (R) TCEERPAEDGsDEEDPDsmEAPTR (I) T(0.0)CEERPAEDGS(0.99)DEEDPDS(0.99)M(1.0)EAPT(0.0)R C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine WDR55 42582.8 8 3 2434.1 83.56 HUMAN 1 3.963 13.7397 SDEEDQRSGKDSEAW-p Q96F63;S264-p SDEEDQRSGKDSEAW 0.912869099045042 0.436851484241623 -0.0266666666666667 0.101666666666667 0.772233588095988 4.79115216712965 -0.0266666666666667 0.101666666666667 0.837098649332048 0.33180641886445 -0.215727511983122 1.06543512652795 Q96F63 CCDC97 Q96F63.S264.p_CCDC97 Q96F63_S257sS264s_2_2_257_264 Q96F63 Q96F63 Coiled-coil domain-containing protein 97 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22474.22474.5 19.23 19.23 2.609 4 2 2 0 1132.4768 5498.3985 S257s S264s TMT10 237 (R) LLQQQEEEEACLEEEEEEEDsDEEDQRsGKDSEAWVPDSEER (L) LLQQQEEEEACLEEEEEEEDS(0.99)DEEDQRS(0.99)GKDS(0.0)EAWVPDS(0.0)EER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCDC97 39288.2 2 4 1741.1 118.22 HUMAN 1 -0.7722 4.7912 SDEEDRASEPKSQDQ-p E7ERS3;S74-p SDEEDRASEPKSQDQ 0.996377054095677 0.0474461792514769 0.00166666666666665 0.406 0.0306077883469718 17.7085019781048 0.00166666666666666 0.406 0.992977073105382 0.0169492233306858 0.0092159476868192 3.40078266250471 E7ERS3 ZC3H18 E7ERS3.S74.p_ZC3H18 E7ERS3_S67sS74s_2_2_67_74 E7ERS3 E7ERS3|Q86VM9|Q86VM9-2 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9533.9533.5 16.06 16.06 14.291 5 2 2 0 856.3578 4116.839 N65n S67s S74s TMT10 45 (R) ASDLEDEESAARGPSQEEEDnHsDEEDRAsEPK (S) AS(0.0)DLEDEES(0.0)AARGPS(0.0)QEEEDN(1.0)HS(0.99)DEEDRAS(0.99)EPK K:TMT10,n:Deamidated,s:Phosphorylated S ZC3H18 109165.8 6 23 157.1 499.97 HUMAN 1 0.0306 17.7085 SDEEESASESELWKG-p Q70Z53;S285-p SDEEESASESELWKG 0.175496488250389 0.0393465291354279 -0.404666666666667 0.281333333333333 15.0335613114452 18.8535289794162 -0.404666666666667 0.281333333333333 0.031379344624331 0.0130210828451006 -2.88474799758562 3.63395608913412 Q70Z53 FRA10AC1 Q70Z53.S285.p_FRA10AC1 Q70Z53_S283sS285s_2_2_283_285 Q70Z53 Q70Z53 Protein FRA10AC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20859.20859.3 9.04 9.04 1.144 4 2 2 0 786.6646 2198.0501 S283s S285s TMT10 277 (R) NSDEEEsAsESELWK (G) NS(0.0)DEEES(0.99)AS(0.99)ES(0.0)ELWK K:TMT10,s:Phosphorylated S FRA10AC1 37946.8 9 4 1518.1 134.45 HUMAN 2 -15.0336 18.8535 SDEEETGSPSEDGMQ-p Q13610;S57-p SDEEETGSPSEDGMQ 0.317722808999546 0.714457930300217 0.274333333333333 0.0543333333333333 9.32485814616171 2.01017664110244 0.274333333333333 0.0543333333333333 0.116819188595206 0.629480579399305 1.86461326638789 0.510995112766801 Q13610 PWP1 Q13610.S57.p_PWP1 Q13610_T55tS57sS59s_3_3_55_59 Q13610 Q13610|Q13610-2 Periodic tryptophan protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12955.12955.3 12.68 12.68 1.187 5 3 3 0 1179.8038 3297.5065 T55t S57s S59s TMT10 41 (K) EKLQEEGGGSDEEEtGsPsEDGMQSAR (T) EKLQEEGGGS(0.0)DEEET(0.99)GS(0.99)PS(0.99)EDGMQS(0.0)AR K:TMT10,t:Phosphorylated T,s:Phosphorylated S PWP1 56397.4 3 7 2267.1 90.54 HUMAN 1 9.3249 2.0102 SDEELLASLDENDEL-p Q9H9A7;S250-p SDEELLASLDENDEL 0.763094407024719 0.639566102059308 -0.048 0.0596666666666667 2.25001961447792 2.64348121748719 -0.048 0.0596666666666667 0.595659453286314 0.544066365316672 -0.563485392993123 0.646935224037936 Q9H9A7 RMI1 Q9H9A7.S250.p_RMI1 Q9H9A7_S250s _1_1_250_250 Q9H9A7 Q9H9A7 RecQ-mediated genome instability protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33443.33443.4 17.19 17.19 1.136 7 1 1 0 1039.2303 4073.936 S250s TMT10 232 (R) VTDVLDPALGPSDEELLAsLDENDELTANNDTSSER (C) VT(0.0)DVLDPALGPS(0.0)DEELLAS(0.99)LDENDELT(0.0)ANNDT(0.0)S(0.0)S(0.0)ER s:Phosphorylated S RMI1 70713.7 2 4 2180.1 94.33 HUMAN 1 -2.25 2.6435 SDEEREPTPVLGSGA-p P42166;T74-p SDEEREPTPVLGSGA 0.122884208631954 0.11292919862777 0.327666666666667 0.186 18.9597803883044 12.49218945792 0.327666666666667 0.186 0.0127063835654037 0.0563353574410536 3.65917866408432 2.41868650548509 P42166 TMPO P42166.T74.p_TMPO P42166_T74t _1_1_74_74 P42166 P42166|P42167|G5E972|P42167-2|P42167-3 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15885.16093.4 22.94 19.69 3.028 4 1 1 0 720.5907 2799.3747 T74t TMT10 61 (K) GPPDFSSDEEREPtPVLGSGAAAAGR (S) GPPDFS(0.0)S(0.0)DEEREPT(0.99)PVLGS(0.0)GAAAAGR t:Phosphorylated T TMPO 76061.2 15 3 123.1 546.19 HUMAN 1 18.9598 12.4922 SDEFISLSPGTPPST-p Q99728;S391-p SDEFISLSPGTPPST 0.453195332145344 0.169808560434942 0.119 -0.154 6.34034807056804 10.1247341901906 0.119 -0.154 0.23225506452655 0.0971687421857112 1.34497506399395 -2.00256839701453 Q99728 BARD1 Q99728.S391.p_BARD1 Q99728_S391sT394t_2_2_391_394 Q99728 Q99728|Q99728-2|Q99728-3 BRCA1-associated RING domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26460.26460.3 16.88 16.88 1.174 12 2 2 0 1050.7897 2990.4251 S391s T394t TMT10 380 (K) NSNMSDEFISLsPGtPPSTLSSSSYR (R) NS(0.0)NMS(0.0)DEFIS(0.0)LS(0.99)PGT(0.99)PPS(0.0)T(0.0)LS(0.0)S(0.0)S(0.0)S(0.0)Y(0.0)R s:Phosphorylated S,t:Phosphorylated T BARD1 88129.6 4 9 1495.1 136.58 HUMAN 1 6.3403 -10.1247 SDEGGAASDDSMTDL-p Q15527;S163-p SDEGGAASDDSMTDL 0.305580482046367 0.268525391264189 0.158 0.115333333333333 9.65224708907193 7.51940330401917 0.158 0.115333333333333 0.108336622296731 0.177035217795467 1.92135205391866 1.5511991442441 Q15527 SURF2 Q15527.S163.p_SURF2 Q15527_S163sS166s_2_2_163_166 Q15527 Q15527 Surfeit locus protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33911.34325.4 23.54 17.72 1.574 8 2 2 0 1042.714 4007.8897 S163s S166s TMT10 148 (R) EAFWEPTSSDEGGAAsDDsMTDLYPPELFTRK (D) EAFWEPT(0.0)S(0.0)S(0.0)DEGGAAS(0.99)DDS(0.99)MT(0.0)DLY(0.0)PPELFT(0.0)RK K:TMT10,s:Phosphorylated S SURF2 30103.5 4 8 1281.1 158.83 HUMAN 1 9.6522 7.5194 SDEIKRASGDVQTMK-p Q5VZ89-7;S1662-p SDEIKRASGDVQTMK 0.0506176118125653 0.124524730450313 -0.446 -0.179666666666667 28.5444847760034 11.9342648067066 -0.446 -0.179666666666667 0.00139814277374597 0.064058021269979 -6.00121605972216 -2.31953051682171 Q5VZ89 DENND4C Q5VZ89.7.S1662.p_DENND4C Q5VZ89-7_S1662s _1_1_1662_1662 Q5VZ89-7 Q5VZ89-7|Q5VZ89-3 Isoform 2 of DENN domain-containing protein 4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6649.6649.3 8.68 8.68 3.476 2 1 1 0 544.2835 1550.8725 S1662s TMT10 1660 (K) RAsGDVQTMK (I) RAS(0.99)GDVQT(0.0)MK K:TMT10,s:Phosphorylated S DENND4C 220154.2 7 24 116.1 565.52 HUMAN 1 -28.5445 -11.9343 SDEKKAASLGSSQSS-p P20810-6;S51-p SDEKKAASLGSSQSS 0.909465039529785 0.592984753364656 -0.0176666666666667 0.0523333333333333 0.809144204176796 3.07089973732761 -0.0176666666666667 0.0543583927315383 0.830014309264823 0.49307164264777 -0.225294384342949 0.734671886663948 P20810 CAST P20810.6.S51.p_CAST P20810-6_S51s _1_1_51_51 P20810-6 P20810-6|P20810-7|P20810-10|P20810-5|A0A0C4DGB5|P20810-9 Isoform 6 of Calpastatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5811.5811.3 11.84 11.84 2.127 5 1 1 0 572.9733 1636.9383 S51s TMT10 48 (K) KAAsLGSSQSSR (T) KAAS(0.99)LGS(0.0)S(0.0)QS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S CAST 85340.8 2 4 314.1 369.19 HUMAN 1 -0.8091 3.0709 SDENVLDSPKQRRSF-p Q2LD37;S1355-p SDENVLDSPKQRRSF 0.513458021750611 0.771637506922735 0.087 0.0376666666666667 5.34707118753331 1.5576326109763 0.087 0.0376666666666667 0.291939514364195 0.698613122325148 1.16729750296034 0.40840044869434 Q2LD37 KIAA1109 Q2LD37.S1355.p_KIAA1109 Q2LD37_S1355s _1_1_1355_1355 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7|Q2LD37-6|Q2LD37-2 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12353.12353.3 11.16 7.93 11.157 2 1 1 0 547.9442 1561.8474 S1355s TMT10 1348 (R) SDENVLDsPK (Q) S(0.0)DENVLDS(0.99)PK K:TMT10,s:Phosphorylated S KIAA1109 559693.9 6 7 143.1 520.8 HUMAN 1 5.3471 1.5576 SDESDEDTF______-p Q9BS91;T423-p SDESDEDTF______ 0.102728705875057 0.79536872724611 0.381333333333333 -0.0333333333333333 20.8639181147484 1.38890975542469 0.381333333333333 -0.0333333333333333 0.00819611773932536 0.726288260569901 4.06685866438991 -0.368736850281199 Q9BS91 SLC35A5 Q9BS91.T423.p_SLC35A5 Q9BS91_T423t _1_1_423_423 Q9BS91 Q9BS91 Probable UDP-sugar transporter protein SLC35A5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16156.16156.3 11.23 11.23 1.217 4 1 1 0 793.7392 2299.2272 T423t TMT10 411 (R) LTKPKSDESDEDtF (-) LT(0.0)KPKS(0.0)DES(0.0)DEDT(0.99)F K:TMT10,t:Phosphorylated T SLC35A5 49127.1 1 3 4445.1 31.33 HUMAN 1 20.8639 -1.3889 SDESQLLTPGKMSQR-p Q9BZF1;T39-p SDESQLLTPGKMSQR 0.737762464655857 0.0171552060422052 0.0486666666666667 -0.339 2.50422269860783 24.3579931097505 0.0486666666666667 -0.339 0.561794819540704 0.00366606945885071 0.617781160479528 -4.87710791342702 Q9BZF1 OSBPL8 Q9BZF1.T39.p_OSBPL8 Q9BZF1_T39t _1_1_39_39 Q9BZF1 Q9BZF1 Oxysterol-binding protein-related protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24182.24182.3 20.26 20.26 1.604 5 1 1 0 922.4863 2685.4711 T39t TMT10 21 (K) DVLGPSTVVANSDESQLLtPGK (M) DVLGPS(0.0)T(0.0)VVANS(0.0)DES(0.0)QLLT(0.99)PGK K:TMT10,t:Phosphorylated T OSBPL8 101821.3 8 2 1293.1 156.92 HUMAN 1 2.5042 -24.358 SDETRSLSPGAASSS-p Q6ZN18;S141-p SDETRSLSPGAASSS 0.659749593472852 0.111712876108522 -0.0633333333333334 -0.195 3.38512311427797 12.5653841763017 -0.0633333333333334 -0.195 0.458656643564869 0.0553938540444061 -0.797606141009497 -2.43175719552751 Q6ZN18 AEBP2 Q6ZN18.S141.p_AEBP2 Q6ZN18_S141s _1_1_141_141 Q6ZN18 Q6ZN18|Q6ZN18-2 Zinc finger protein AEBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12030.12030.3 12.64 8.03 1.71 6 1 1 0 1113.8864 3259.7009 S141s TMT10 139 (R) SLsPGAASSSSGDGDGKEGLEEPKGPR (G) S(0.0)LS(0.99)PGAAS(0.0)S(0.0)S(0.0)S(0.0)GDGDGKEGLEEPKGPR K:TMT10,s:Phosphorylated S AEBP2 54979.1 4 3 1557.1 131.71 HUMAN 1 -3.3851 -12.5654 SDEVEPATPEEGEPA-p O76087;T40-p SDEVEPATPEEGEPA 0.456489657396021 0.0645428542028742 0.104333333333333 0.234666666666667 6.27552197458999 15.8425013501794 0.104333333333333 0.234666666666667 0.235747883569492 0.026046529493748 1.3335007384204 3.03588793689978 O76087 GAGE7 O76087.T40.p_GAGE7 O76087_T40t _1_1_40_40 O76087 Q13065|Q13068|O76087|P0CL80-2 G antigen 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22027.22027.3 15.06 15.06 3.231 4 1 1 0 1307.922 3841.7684 T40t Hydrogen 17 (R) YVQPPEMIGPMRPEQFSDEVEPAtPEEGEPATQR (Q) Y(0.0)VQPPEMIGPMRPEQFS(0.0)DEVEPAT(0.99)PEEGEPAT(0.0)QR t:Phosphorylated T GAGE7 13148.8 2 3 2911.3 66.12 HUMAN 1 6.2755 15.8425 SDFENIESPLNERDS-p Q96K76;S910-p SDFENIESPLNERDS 0.406662089963844 0.0549350907862547 0.142666666666667 0.332666666666667 7.21718226405338 16.7950298198125 0.142666666666667 0.332666666666667 0.189793691787386 0.0209168854496449 1.4989788299661 3.2199557717563 Q96K76 USP47 Q96K76.S910.p_USP47 Q96K76_S910s _1_1_910_910 Q96K76 Q96K76|Q96K76-4|Q96K76-2 Ubiquitin carboxyl-terminal hydrolase 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18789.18789.3 19.44 19.44 7.244 5 1 1 0 759.6761 2197.0458 S910s TMT10 899 (K) STETSDFENIEsPLNER (D) S(0.0)T(0.0)ET(0.0)S(0.0)DFENIES(0.99)PLNER s:Phosphorylated S USP47 158677.8 5 6 770.1 227.83 HUMAN 1 7.2172 16.795 SDFRMEESFSSKYVP-p P42167;S385-p SDFRMEESFSSKYVP 0.287795094392825 0.061046582696923 -0.179 -0.531 10.2003029709442 16.1744217441144 -0.179 -0.531 0.0954925966498164 0.0241300279851586 -2.0165324200387 -3.09953333576942 P42167 TMPO P42167.S385.p_TMPO P42167_S385s _1_1_385_385 P42167 P42167|G5E972|P42167-2 Lamina-associated polypeptide 2, isoforms beta/gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20804.20804.4 17.58 13.78 2.217 4 1 1 0 713.8582 2772.4391 S385s TMT10 369 (K) GAAGRPLELSDFRMEEsFSSK (Y) GAAGRPLELS(0.0)DFRMEES(0.99)FS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S TMPO 50726.4 26 43 123.2 546.19 HUMAN 1 -10.2003 -16.1744 SDFSDTLSPSKEKSS-p Q14BN4;S452-p SDFSDTLSPSKEKSS 0.141525291296506 0.00262293931700471 0.471333333333333 -1.09566666666667 17.3676372733463 39.2970376889757 0.471333333333333 -1.09566666666667 0.0183331154210401 0.000117569922279032 3.3353985669188 -9.81962819111684 Q14BN4 SLMAP Q14BN4.S452.p_SLMAP Q14BN4_S452s _1_1_452_452 Q14BN4 Q14BN4|Q14BN4-3|Q14BN4-2|Q14BN4-6|Q14BN4-4 Sarcolemmal membrane-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13799.13799.3 17.43 9.79 1.699 5 1 1 0 760.3977 2199.2112 S452s TMT10 442 (R) AKESDFSDTLsPSK (E) AKES(0.0)DFS(0.0)DT(0.0)LS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S SLMAP 96052.4 8 3 2581.1 77.77 HUMAN 1 17.3676 -39.297 SDGGLSQSQDDSIVG-p Q8TEU7;S701-p SDGGLSQSQDDSIVG 0.616862436970969 0.256632212378542 0.084 -0.116666666666667 3.8943021353108 7.77965986866461 0.084 -0.116666666666667 0.407915104090768 0.166737779335544 0.896870701758767 -1.59642130731497 Q8TEU7 RAPGEF6 Q8TEU7.S701.p_RAPGEF6 Q8TEU7_S701s _1_1_701_701 Q8TEU7 Q8TEU7|Q8TEU7-3|Q8TEU7-5|Q8TEU7-2|B7Z7Y1|D6RE77 Rap guanine nucleotide exchange factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23676.23676.3 15.06 15.06 1.153 5 1 1 0 764.3658 2211.1091 S701s TMT10 692 (K) LFSDGGLSQsQDDSIVGTR (H) LFS(0.0)DGGLS(0.0)QS(0.99)QDDS(0.0)IVGT(0.0)R s:Phosphorylated S RAPGEF6 180960.1 1 8 795.1 224.05 HUMAN 1 3.8943 -7.7797 SDGLRRLSGNEYVLS-p O60658;S457-p SDGLRRLSGNEYVLS 0.146782194171833 0.992600251712628 -0.261666666666667 -0.00133333333333332 16.9289994954363 0.0463766566870026 -0.261666666666667 -0.00133333333333332 0.020281499001092 0.989378194214039 -3.24866368813769 -0.0139376635403192 O60658 PDE8A O60658.S457.p_PDE8A O60658_S457s _1_1_457_457 O60658 O60658|O60658-2|O60658-6 High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15421.15421.3 12.26 12.26 6.533 4 1 1 0 635.6795 1825.0584 S457s TMT10 455 (R) RLsGNEYVLSTK (N) RLS(0.99)GNEY(0.0)VLS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S PDE8A 94443.4 1 2 4894.1 25.36 HUMAN 1 -16.929 -0.0464 SDGTPRGSPSPASVS-p Q96II5;S260-p SDGTPRGSPSPASVS 0.431732922980342 1 0.107 1.85037170770859e-17 6.71630593405592 0 0.107 0 0.212994999010037 1 1.4112568487367 0 Q96II5 ARAF Q96II5.S260.p_ARAF Q96II5_S260s _1_1_260_260 Q96II5 Q96II5|P10398 ARAF protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3996.3996.2 13.5 6.39 1.407 5 1 1 0 584.7541 1088.5331 S260s Hydrogen 259 (R) GsPSPASVSSGR (K) GS(0.99)PS(0.0)PAS(0.0)VS(0.0)S(0.0)GR s:Phosphorylated S ARAF 68723.3 9 35 441.2 311.96 HUMAN 1 6.7163 0 SDGVAKMSPKDLFEQ-p Q9H6S3;S28-p SDGVAKMSPKDLFEQ 0.653780563370571 0.0537292744776855 0.0843333333333333 -0.332 3.46149593819906 16.927738103372 0.0843333333333333 -0.332 0.450661446341738 0.0202873905420967 0.812684992928859 -3.24595546494828 Q9H6S3 EPS8L2 Q9H6S3.S28.p_EPS8L2 Q9H6S3_S28s _1_1_28_28 Q9H6S3 Q9H6S3-3 Epidermal growth factor receptor kinase substrate 8-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17603.17603.5 14.83 8.51 2.542 2 1 1 0 587.329 2852.6474 S28s TMT10 21 (R) SDGVAKMsPKDLFEQRK (K) S(0.0)DGVAKMS(0.99)PKDLFEQRK K:TMT10,s:Phosphorylated S EPS8L2 81246.7 14 2 559.1 272.21 HUMAN 1 3.4615 -16.9277 SDHDEADS_______-p Q9NRG0;S131-p SDHDEADS_______ 0.662891847562873 0.0644841419775167 -0.135333333333333 -0.261666666666667 3.3410865117643 15.8507180487531 -0.135333333333333 -0.261666666666667 0.463330989746586 0.0259972969654867 -0.788878806440232 -3.03745728722944 Q9NRG0 CHRAC1 Q9NRG0.S131.p_CHRAC1 Q9NRG0_S124sS131s_2_2_124_131 Q9NRG0 Q9NRG0 Chromatin accessibility complex protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3691.3691.4 24.84 24.84 99 2 2 2 0 842.8218 3208.331 S124s S131s TMT10 109 (K) EEKREEDEENDNDNEsDHDEADs (-) EEKREEDEENDNDNES(1.0)DHDEADS(1.0) K:TMT10,s:Phosphorylated S CHRAC1 14767.3 2 2 3595.1 47.5 HUMAN 1 -3.3411 -15.8507 SDHRFLGTVEKEATF-p O75534;T431-p SDHRFLGTVEKEATF 0.0745793811074775 0.00461053140437773 -0.393333333333333 -0.570333333333333 24.1501983130188 34.1997748449992 -0.393333333333333 -0.570333333333333 0.00384574220731741 0.000380209107315378 -4.83171817164013 -7.80421959090262 O75534 CSDE1 O75534.T431.p_CSDE1 O75534_T431t _1_1_431_431 O75534 O75534|O75534-2|E9PLT0 Cold shock domain-containing protein E1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20103.20103.2 9.42 4.53 99 1 1 1 0 666.3723 1251.7713 T431t TMT10 428 (R) FLGtVEK (E) FLGT(1.0)VEK K:TMT10,t:Phosphorylated T CSDE1 89738.9 1 5 1077.1 180.35 HUMAN 1 -24.1502 -34.1998 SDIASHFSNKRKKCV-p Q9H2P0;S805-p SDIASHFSNKRKKCV 0.267978150841997 0.721499874179873 -0.214666666666667 0.038 10.8384888974256 1.95447172394742 -0.214666666666667 0.038 0.0824424919004698 0.637606634824987 -2.12783734531648 0.49863829057113 Q9H2P0 ADNP Q9H2P0.S805.p_ADNP Q9H2P0_S805s _1_1_805_805 Q9H2P0 Q9H2P0 Activity-dependent neuroprotector homeobox protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10510.10510.3 13.92 13.92 2.435 3 1 1 0 548.6111 1563.8531 S805s TMT10 798 (K) SDIASHFsNK (R) S(0.0)DIAS(0.0)HFS(0.99)NK K:TMT10,s:Phosphorylated S ADNP 124930 2 9 276.1 391.38 HUMAN 1 -10.8385 1.9545 SDIGNRRSPPPSLAK-p P54284;S152-p SDIGNRRSPPPSLAK 0.883580859844558 0.545173038876923 0.023 0.0636666666666667 1.06225184829228 3.54389488311708 0.023 0.0636666666666667 0.78302353412573 0.442191623775905 0.289421571137407 0.828745815784924 P54284 CACNB3 P54284.S152.p_CACNB3 P54284_S152s _1_1_152_152 P54284 P54284|P54284-4|P54284-3|F8VNV8|P54284-2|P54284-5 Voltage-dependent L-type calcium channel subunit beta-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13154.13154.4 15.7 15.7 1.875 6 1 1 0 694.6185 2695.4891 S152s TMT10 138 (R) SGNPSSLSDIGNRRsPPPSLAK (Q) S(0.0)GNPS(0.0)S(0.0)LS(0.0)DIGNRRS(0.99)PPPS(0.0)LAK K:TMT10,s:Phosphorylated S CACNB3 54759.2 4 2 4973.1 24.4 HUMAN 1 1.0623 3.5439 SDIIAIKSPDTFVRT-p P13804;S140-p SDIIAIKSPDTFVRT 0.8987845085049 0.0178421493972779 -0.0276666666666667 0.571333333333333 0.906403816486787 24.0789015037715 -0.0276666666666667 0.571333333333333 0.811632853764603 0.00390939766851172 -0.250233170792207 4.80849483282428 P13804 ETFA P13804.S140.p_ETFA P13804_S140s _1_1_140_140 P13804 P13804|P13804-2|H0YK49 Electron transfer flavoprotein subunit alpha, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34243.34243.3 18.57 18.57 3.427 3 1 1 0 908.1782 2642.5533 S140s TMT10 127 (K) LEVAPISDIIAIKsPDTFVR (T) LEVAPIS(0.0)DIIAIKS(0.99)PDT(0.0)FVR K:TMT10,s:Phosphorylated S ETFA 35421.3 2 1 2905.1 66.39 HUMAN 1 -0.9064 24.0789 SDIQECLSPGPCPAT-p Q9NRF2;S376-p SDIQECLSPGPCPAT 0.816789054725037 0.0629095680996146 -0.0596666666666667 -0.216333333333333 1.68845965266806 15.9924807856416 -0.0596666666666667 -0.216333333333333 0.677881894827349 0.0251623918597339 -0.438647837173039 -3.06458248885442 Q9NRF2 SH2B1 Q9NRF2.S376.p_SH2B1 Q9NRF2_S376s _1_1_376_376 Q9NRF2 Q9NRF2|Q9NRF2-3|Q9NRF2-2|F5GXU7|B4DLN5 SH2B adapter protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.33376.33376.4 29.06 29.06 8.828 8 1 1 0 1055.766 4140.0918 S376s TMT10 366 (K) AWVSDIQECLsPGPCPATSPRPMTLPLAPGTSFLTR (E) AWVS(0.0)DIQECLS(0.99)PGPCPAT(0.0)S(0.0)PRPMT(0.0)LPLAPGT(0.0)S(0.0)FLT(0.0)R C:Carbamidomethylation,s:Phosphorylated S SH2B1 79821.5 1 3 2248.1 91.44 HUMAN 1 -1.6885 -15.9925 SDITKKLSVACFYGG-p Q9NR30;S288-p SDITKKLSVACFYGG 0.644315963725357 0.841637571929101 0.0796666666666666 -0.0203333333333333 3.57085573371124 1.05265634384931 0.0796666666666667 -0.0203333333333333 0.439455016703659 0.784755495404366 0.834154762519011 -0.287006584349858 Q9NR30 DDX21 Q9NR30.S288.p_DDX21 Q9NR30_S288s _1_1_288_288 Q9NR30 Q9NR30|Q9NR30-2 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22849.22849.3 15.27 15.27 4.249 4 1 1 0 892.4453 2595.343 S288s TMT10 286 (K) KLsVACFYGGTPYGGQFER (M) KLS(0.99)VACFY(0.0)GGT(0.0)PY(0.0)GGQFER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DDX21 87856.3 1 21 103.1 590.75 HUMAN 1 3.5709 -1.0527 SDKLGELSDKIGSTI-p Q14677-3;S205-p SDKLGELSDKIGSTI 0.484727412479806 0.00363879152855353 -0.199333333333333 0.656666666666667 5.79409791983662 36.2254789172182 -0.199333333333333 0.656666666666667 0.263384496710298 0.000238480079761747 -1.24779562164079 8.55648702709573 Q14677 CLINT1 Q14677.3.S205.p_CLINT1 Q14677-3_S205s _1_1_205_205 Q14677-3 Q14677-3|Q14677-2 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28070.28070.3 16.24 16.24 3.72 5 1 1 0 887.1559 2579.4747 S205s TMT10 201 (K) LGELsDKIGSTIDDTISK (F) LGELS(0.99)DKIGS(0.0)T(0.0)IDDT(0.0)IS(0.0)K K:TMT10,s:Phosphorylated S CLINT1 70350.7 1 13 632.1 256.73 HUMAN 1 -5.7941 36.2255 SDKLGFKSPTSKDDK-p Q6KC79;S912-p SDKLGFKSPTSKDDK 0.160947056827815 0.0264579096715966 -0.373666666666667 -0.394333333333333 15.8887181262742 21.4143004681394 -0.373666666666667 -0.394333333333333 0.0257708170220303 0.00722054457166555 -3.04685203722243 -4.18499005410173 Q6KC79 NIPBL Q6KC79.S912.p_NIPBL Q6KC79_S912s _1_1_912_912 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13585.13585.3 7.79 3.39 7.787 3 1 1 0 773.775 2239.3468 S912s TMT10 908 (K) LGFKsPTSKDDK (R) LGFKS(0.99)PT(0.0)S(0.0)KDDK K:TMT10,s:Phosphorylated S NIPBL 318099.5 2 20 50.1 752.87 HUMAN 1 -15.8887 -21.4143 SDKNLIDSMDQSAFA-p Q05655-2;S685-p SDKNLIDSMDQSAFA 0.0507410919483046 0.0126231003819755 -0.475 -0.726666666666667 28.4609256556436 26.4721361533231 -0.475 -0.726666666666667 0.00142530377185279 0.00225313069783566 -5.97718462131602 -5.41926007310028 Q05655 PRKCD Q05655.2.S685.p_PRKCD Q05655-2_S685s _1_1_685_685 Q05655-2 Q05655-2 Isoform 2 of Protein kinase C delta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.35290.35290.3 18.53 18.53 1.105 3 1 1 0 909.4449 2646.3638 S685s TMT10 681 (K) NLIDsMDQSAFAGFSFVNPK (F) NLIDS(0.99)MDQS(0.0)AFAGFS(0.0)FVNPK K:TMT10,s:Phosphorylated S PRKCD 82263.9 4 10 687.1 243.52 HUMAN 1 -28.4609 -26.4721 SDKPFVDSPASRFAG-p O94913;S728-p SDKPFVDSPASRFAG 0.328716152633685 0.160433672085933 0.203666666666667 -0.153 9.03450527338161 10.4529946763334 0.203666666666667 -0.153 0.124896271209145 0.0900949673780672 1.81433617961184 -2.05965710790164 O94913 PCF11 O94913.S728.p_PCF11 O94913_S728s _1_1_728_728 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13542.13542.3 13.44 13.44 1.991 4 1 1 0 751.028 2171.1021 S728s TMT10 718 (R) YEDSDKPFVDsPASR (F) Y(0.0)EDS(0.0)DKPFVDS(0.99)PAS(0.0)R K:TMT10,s:Phosphorylated S PCF11 173731.7 1 12 508.1 288.88 HUMAN 1 9.0345 -10.453 SDLCDLVSNQSAEGL-p A6NHB5;S959-p SDLCDLVSNQSAEGL 0.216703587286115 0.00613915320714873 -0.371666666666667 0.632333333333333 12.8022475088577 31.8779350913739 -0.371666666666667 0.632333333333333 0.0524535938433478 0.000648942908408913 -2.47549329953871 7.01243054124374 A6NHB5 NotFound A6NHB5.S959.p_NotFound A6NHB5_S959sS962s_2_2_959_962 A6NHB5 A6NHB5|Q14202|Q14202-2|A6NHN7 Zinc finger MYM-type protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36646.36646.4 23.18 23.18 8.938 4 2 2 0 1150.7843 4440.1773 S959s S962s TMT10 950 (K) ASSDLCDLVsNQsAEGLLEDCDLFGPARDDVLAMAVK (M) AS(0.0)S(0.0)DLCDLVS(0.99)NQS(0.99)AEGLLEDCDLFGPARDDVLAMAVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZMYM3 156426.3 2 17 331.1 357.99 HUMAN 1 -12.8022 31.8779 SDLEDNRSEDSVRPW-p O43166;S318-p SDLEDNRSEDSVRPW 0.96543844430701 0.183313099831904 -0.00733333333333334 -0.139 0.294552915606363 9.69217232963887 -0.00733333333333333 -0.139 0.934425557732085 0.107345233997866 -0.0861758166996805 -1.92752377264124 O43166 SIPA1L1 O43166.S318.p_SIPA1L1 O43166_S318s _1_1_318_318 O43166 O43166|O43166-2|O43166-3 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12988.12988.4 17.85 17.85 3.614 5 1 1 0 729.8458 2836.3936 S318s TMT10 310 (K) SSDLEDNRsEDSVRPWTCPK (C) S(0.0)S(0.0)DLEDNRS(0.99)EDS(0.0)VRPWT(0.0)CPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SIPA1L1 201223.1 3 10 46.1 777.88 HUMAN 1 -0.2946 -9.6922 SDLEREVSDSEAGGG-p Q9BW71;S370-p SDLEREVSDSEAGGG 0.62471869465399 0.112523345752437 -0.0893333333333333 0.342333333333333 3.79765691526508 12.5147147996259 -0.0893333333333334 0.342333333333333 0.417094351519776 0.0560439220094539 -0.878248417941724 2.42270734333439 Q9BW71 HIRIP3 Q9BW71.S370.p_HIRIP3 Q9BW71_S370s _1_1_370_370 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4117.4117.3 11.16 12.77 2.404 2 1 1 0 637.96 1831.8984 S370s Hydrogen 368 (R) EVsDSEAGGGPQGERK (N) EVS(0.99)DS(0.0)EAGGGPQGERK K:TMT10-Lys-Only,s:Phosphorylated S HIRIP3 62298.3 2 14 178.1 481.23 HUMAN 1 -3.7977 12.5147 SDLKAARSIPAGAEP-p Q9H910-3;S160-p SDLKAARSIPAGAEP 0.708594492326133 0.0638458482560625 -0.081 -0.250666666666667 2.81144853719199 15.9076080463191 -0.081 -0.250666666666667 0.523425825057154 0.0256589686049688 -0.681848081737858 -3.04833155036712 Q9H910 HN1L Q9H910.3.S160.p_HN1L Q9H910-3_S160s _1_1_160_160 Q9H910-3 Q9H910-3|A6NGP5|Q9H910-2 Isoform 3 of Jupiter microtubule associated homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8752.8752.2 13.83 13.83 99 1 1 1 0 682.8354 1284.6997 S160s Hydrogen 160 (R) sIPAGAEPGEK (G) S(1.0)IPAGAEPGEK K:TMT10-Lys-Only,s:Phosphorylated S JPT2 23082.3 3 9 1318.1 154.67 HUMAN 1 -2.8114 -15.9076 SDLKAVHSPIRSQPV-p Q7RTP6;S1221-p SDLKAVHSPIRSQPV 0.179811527158843 0.00383049919619955 -0.298666666666667 -0.698333333333333 14.7112229520191 35.799963776594 -0.298666666666667 -0.698333333333334 0.0337969652203934 0.000263028993038797 -2.8244642222411 -8.39342136985538 Q7RTP6 MICAL3 Q7RTP6.S1221.p_MICAL3 Q7RTP6_S1221s _1_1_1221_1221 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11029.11029.3 14.94 14.94 2.828 3 1 1 0 723.058 2087.1923 S1221s TMT10 1218 (K) AVHsPIRSQPVTLPEAR (T) AVHS(0.99)PIRS(0.0)QPVT(0.0)LPEAR s:Phosphorylated S MICAL3 225431.9 4 9 190.1 466.81 HUMAN 1 -14.7112 -35.8 SDLMLKNSPNSGQSS-p Q86VQ1;S480-p SDLMLKNSPNSGQSS 0.619195445375422 0.306362818674657 0.0806666666666667 0.136 3.86855450793234 6.78782785592859 0.0806666666666667 0.136 0.410340656751372 0.209516009791528 0.89191882634576 1.42343867916222 Q86VQ1 GLCCI1 Q86VQ1.S480.p_GLCCI1 Q86VQ1_S480s _1_1_480_480 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24364.24364.3 15.11 15.11 2.568 8 1 1 0 852.7567 2476.2841 S480s TMT10 479 (K) NsPNSGQSSALATLTVEQLSSR (V) NS(0.99)PNS(0.0)GQS(0.0)S(0.0)ALAT(0.0)LT(0.0)VEQLS(0.0)S(0.0)R s:Phosphorylated S GLCCI1 58707.2 1 16 307.1 373.49 HUMAN 1 3.8686 6.7878 SDLNGLPSPVEERCG-p E7EWN3;S91-p SDLNGLPSPVEERCG 0.932222789878927 0.0341449488552692 -0.0136666666666667 0.322 0.603634839426168 19.7618667411821 -0.0136666666666667 0.322 0.870234939586545 0.0105636335174194 -0.171268710386436 3.82450528704735 E7EWN3 SETD5 E7EWN3.S91.p_SETD5 E7EWN3_S91s _1_1_91_91 E7EWN3 E7EWN3|Q9C0A6 SET domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16036.16036.2 12.3 12.3 9.665 2 1 1 0 861.4201 1641.8645 S91s TMT10 84 (R) SDLNGLPsPVEER (C) S(0.0)DLNGLPS(0.99)PVEER s:Phosphorylated S SETD5 161030.5 2 3 773.1 227.48 HUMAN 1 -0.6036 19.7619 SDLPPGASPRKKPRK-p Q9H0E3-3;S866-p SDLPPGASPRKKPRK 0.445088815343942 0.0621773708295257 0.12 -0.230666666666667 6.47909957522675 16.0564717694274 0.12 -0.230666666666667 0.224952095171751 0.0247943554575103 1.36948746018835 -3.07685736033774 Q9H0E3 SAP130 Q9H0E3.3.S866.p_SAP130 Q9H0E3-3_S866s_1_1_866_866 Q9H0E3-3 Q9H0E3|Q9H0E3-2|Q9H0E3-3|H7BXF5 Isoform 3 of Histone deacetylase complex subunit SAP130 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36573.36573.5 31.52 25.78 3.863 9 1 1 0 1154.005 5668.0204 N852n N853n M856m S866s TMT10 819 (K) VKEEVEPMDIMRPVSAVPPLATNTVSPSLALLAnnLSmPTSDLPPGAsPR (K) VKEEVEPM(0.0)DIM(0.0)RPVS(0.0)AVPPLAT(0.0)N(0.0)T(0.0)VS(0.0)PS(0.0)LALLAN(0.99)N(0.99)LS(0.0)M(0.99)PT(0.0)S(0.0)DLPPGAS(0.99)PR K:TMT10,n:Deamidated,m:Oxidized methionine,s:Phosphorylated S SAP130 114136.2 23 5 1227.1 164.39 HUMAN 1 6.4791 -16.0565 SDLQKCDSVEHLRGL-p Q7L8J4;S350-p SDLQKCDSVEHLRGL 0.30089772208368 0.596154440971765 0.265 0.125666666666667 9.79489924146497 3.04189014153911 0.265 0.125666666666667 0.104835911576508 0.496376240982421 1.94609848559451 0.728804776638243 Q7L8J4 SH3BP5L Q7L8J4.S350.p_SH3BP5L Q7L8J4_S350s _1_1_350_350 Q7L8J4 Q7L8J4|Q7L8J4-2 SH3 domain-binding protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12441.12441.4 17.58 18.22 4.253 3 1 1 0 599.8055 2316.2382 S350s TMT10 340 (R) TVASDLQKCDsVEHLR (G) T(0.0)VAS(0.0)DLQKCDS(0.99)VEHLR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SH3BP5L 43726.7 3 5 1783.1 115.12 HUMAN 1 9.7949 3.0419 SDLSAACSDADLHRH-p Q9H9J4;S1226-p SDLSAACSDADLHRH 0.676419919699668 0.310159388884265 -0.0703333333333333 0.200666666666667 3.18111088262984 6.71719465850425 -0.0703333333333333 0.200666666666667 0.480716370196015 0.212951416946714 -0.756963910849145 1.41103886776792 Q9H9J4 USP42 Q9H9J4.S1226.p_USP42 Q9H9J4_S1219sS1222sS1226s_3_3_1219_1226 Q9H9J4 Q9H9J4|Q9H9J4-2 Ubiquitin carboxyl-terminal hydrolase 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8147.8357.3 14.93 14.93 99 3 3 3 0 832.3148 2255.0308 S1219s S1222s S1226s TMT10 1215 (R) HQQDsDLsAACsDADLHR (H) HQQDS(1.0)DLS(1.0)AACS(1.0)DADLHR C:Carbamidomethylation,s:Phosphorylated S USP42 146872.9 1 14 255.1 399.37 HUMAN 1 -3.1811 6.7172 SDLTPPHSPPPSSRQ-p Q9H7P9;S1261-p SDLTPPHSPPPSSRQ 0.347011640393522 0.00400140022563593 0.134 -0.765 8.53987659283264 35.3441848191808 0.134 -0.765 0.139962709318176 0.000292133605030273 1.7287112479046 -8.22178689944865 Q9H7P9 PLEKHG2 Q9H7P9.S1261.p_PLEKHG2 Q9H7P9_S1261s _1_1_1261_1261 Q9H7P9 Q9H7P9|Q9H7P9-3 Pleckstrin homology domain-containing family G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12263.12263.3 13.47 13.47 1.506 6 1 1 0 705.0096 2033.0501 S1261s TMT10 1251 (R) LESSDLTPPHsPPPSSR (Q) LES(0.0)S(0.0)DLT(0.0)PPHS(0.99)PPPS(0.0)S(0.0)R s:Phosphorylated S PLEKHG2 149335.7 1 12 886.1 206.23 HUMAN 1 8.5399 -35.3442 SDMELNSSSEDSKGS-p O15014;S453-p SDMELNSSSEDSKGS 0.43536856953517 0.132939760585225 -0.109333333333333 0.173333333333333 6.6492851561744 11.5499027959759 -0.109333333333333 0.173333333333333 0.216307453405873 0.0699857660078696 -1.3994716865632 2.25167044277781 O15014 ZNF609 O15014.S453.p_ZNF609 O15014_S452sS453sS454s_3_3_452_454 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19687.19687.3 10.02 10.02 1.112 5 3 3 0 936.7523 2568.343 S452s S453s S454s TMT10 442 (K) NKPLSDMELNsssEDSK (G) NKPLS(0.0)DMELNS(0.99)S(0.99)S(0.99)EDS(0.0)K K:TMT10,s:Phosphorylated S ZNF609 152443.5 1 39 63.1 699.07 HUMAN 1 -6.6493 11.5499 SDMHYELSGDSDLDL-p Q5VWN6;S1827-p SDMHYELSGDSDLDL 0.141525291296506 0.837128948953312 0.252 -0.021 17.36105759564 1.08448980121795 0.252 -0.021 0.0183609116325557 0.779024327095088 3.3340900020691 -0.294910174711968 Q5VWN6 FAM208B Q5VWN6.S1827.p_FAM208B Q5VWN6_S1827sS1830s_2_2_1827_1830 Q5VWN6 Q5VWN6|Q5VWN6-2 Protein FAM208B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23806.23806.4 12.8 12.8 2.435 4 2 2 0 931.8931 3564.6169 S1827s S1830s TMT10 1813 (R) DGEVGVNSDMHYELsGDsDLDLLGDCRNPR (L) DGEVGVNS(0.0)DMHY(0.0)ELS(0.99)GDS(0.99)DLDLLGDCRNPR C:Carbamidomethylation,s:Phosphorylated S FAM208B 271861.7 2 22 275.1 391.61 HUMAN 1 17.3611 -1.0845 SDMPRAHSFTSKGPG-p P78314-4;S282-p SDMPRAHSFTSKGPG 0.961207761243369 0.260931976381405 -0.00900000000000001 -0.239333333333333 0.330817847339492 7.68945435308608 -0.009 -0.239333333333333 0.926655302640796 0.170237238076128 -0.0964227747364543 -1.58075763910955 P78314 SH3BP2 P78314.4.S282.p_SH3BP2 P78314-4_S282s _1_1_282_282 P78314-4 P78314-4|P78314-3 Isoform 4 of SH3 domain-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6258.6258.3 10.44 5.02 6.597 3 1 1 0 439.2315 1235.7148 S282s TMT10 280 (R) AHsFTSK (G) AHS(0.99)FT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SH3BP2 68698.6 2 1 1751.1 117.58 HUMAN 1 -0.3308 -7.6895 SDNGQPGTPDPADSG-p O75691;T1741-p SDNGQPGTPDPADSG 0.729445294623791 0.144320902498158 -0.0536666666666667 -0.181666666666667 2.60179231381114 11.0736289883865 -0.0536666666666667 -0.181666666666667 0.549314127600226 0.0780974944934684 -0.638302607005778 -2.16802856700021 O75691 UTP20 O75691.T1741.p_UTP20 O75691_T1741t_1_1_1741_1741 O75691 O75691 Small subunit processome component 20 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20998.20998.5 23.57 19 9.033 9 1 1 0 1114.9572 5489.8152 N1736n T1741t TMT10 1732 (K) SLSDnGQPGtPDPADSGGTSAKESECITKPVSFLPQNKEEIER (T) S(0.0)LS(0.0)DN(0.99)GQPGT(0.99)PDPADS(0.0)GGT(0.0)S(0.0)AKES(0.0)ECIT(0.0)KPVS(0.0)FLPQN(0.0)KEEIER K:TMT10,C:Carbamidomethylation,n:Deamidated,t:Phosphorylated T UTP20 321004.1 11 3 1054.1 182.86 HUMAN 1 -2.6018 -11.0736 SDNIKPKSAPWNSFL-p Q16637;S187-p SDNIKPKSAPWNSFL 0.305986635992007 0.0992735738240799 -0.163 -0.247 9.64069697548515 13.2566587181816 -0.163 -0.247 0.108625128309457 0.047242636675615 -1.91934912571327 -2.55598434986135 Q16637 SMN1 Q16637.S187.p_SMN1 Q16637_S187s _1_1_187_187 Q16637 Q16637|E7EQZ4|Q16637-3|A0A1W2PRV5|Q16637-2 Survival motor neuron protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32456.32456.3 13.35 13.35 2.616 2 1 1 0 752.041 2174.1418 S187s TMT10 187 (K) sAPWNSFLPPPPPMPGPR (L) S(0.99)APWNS(0.0)FLPPPPPMPGPR s:Phosphorylated S SMN1 32304.6 1 6 1780.1 115.32 HUMAN 1 -9.6407 -13.2567 SDNKMGITPLRNYHP-p Q12789;T774-p SDNKMGITPLRNYHP 0.812521070407363 0.00377183674542825 -0.034 -0.682666666666667 1.73440419581285 35.938642904738 -0.034 -0.682666666666667 0.670748299668281 0.000254762621741647 -0.449146121828413 -8.44626322198997 Q12789 GTF3C1 Q12789.T774.p_GTF3C1 Q12789_T774t _1_1_774_774 Q12789 Q12789|Q12789-3|H3BNA8 General transcription factor 3C polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16746.16746.2 9.28 5.66 99 1 1 1 0 548.7931 1016.6124 T774t TMT10 771 (K) MGItPLR (N) MGIT(1.0)PLR t:Phosphorylated T GTF3C1 241209.8 1 5 225.1 425.73 HUMAN 1 -1.7344 -35.9386 SDNQRRLSPPFPLEP-p Q8NEV8;S1753-p SDNQRRLSPPFPLEP 0.956627121738796 0.878083176837687 -0.00833333333333334 0.0166666666666667 0.378098647835494 0.792855677773848 -0.00833333333333334 0.0166666666666667 0.916621701576201 0.833133182656841 -0.10967242408625 0.221058443336488 Q8NEV8 EXPH5 Q8NEV8.S1753.p_EXPH5 Q8NEV8_S1753s _1_1_1753_1753 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22356.22568.3 17.61 17.61 99 1 1 1 0 673.3793 1938.1577 S1753s TMT10 1751 (R) RLsPPFPLEPAQK (S) RLS(1.0)PPFPLEPAQK K:TMT10,s:Phosphorylated S EXPH5 223884.5 5 26 129.1 537.25 HUMAN 1 -0.3781 0.7929 SDNSLNRSPRSENEK-p Q6UB98-2;S1166-p SDNSLNRSPRSENEK 0.980593512823283 0.0311310082375152 0.00433333333333333 -0.303 0.170186232328958 20.3567291031441 0.00433333333333333 -0.303 0.961571043815419 0.00921143071158737 0.0504535102172135 -3.9521472910709 Q6UB98 ANKRD12 Q6UB98.2.S1166.p_ANKRD12 Q6UB98-2_S1166s _1_1_1166_1166 Q6UB98-2 Q6UB98|Q6UB98-2 Isoform 2 of Ankyrin repeat domain-containing protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9725.9725.3 14.61 9.46 2.176 5 1 1 0 625.6374 1794.9296 S1166s TMT10 1155 (K) SSFVSDNSLNRsPR (S) S(0.0)S(0.0)FVS(0.0)DNS(0.0)LNRS(0.99)PR s:Phosphorylated S ANKRD12 234548.2 3 9 480.1 298.87 HUMAN 1 0.1702 -20.3567 SDPADRLSPFLAARH-p Q9ULP9;S480-p SDPADRLSPFLAARH 0.237912707669171 0.0550562085009536 -0.185 0.325666666666667 11.9430506503512 16.7760742470854 -0.185 0.325666666666667 0.0639285619086733 0.0210083805295786 -2.32223742618497 3.21624936847655 Q9ULP9 TBC1D24 Q9ULP9.S480.p_TBC1D24 Q9ULP9_S480s _1_1_480_480 Q9ULP9 Q9ULP9|Q9ULP9-2 TBC1 domain family member 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23114.23114.5 25 24.21 3.466 7 1 1 0 903.6737 4434.3644 S480s TMT10 449 (K) HPELTKPPPLMAAEPTAPLSHSASSDPADRLsPFLAAR (H) HPELT(0.0)KPPPLMAAEPT(0.0)APLS(0.0)HS(0.0)AS(0.0)S(0.0)DPADRLS(0.99)PFLAAR K:TMT10,s:Phosphorylated S TBC1D24 64059.4 2 1 4926.1 25 HUMAN 1 -11.9431 16.7761 SDPDGGDSPLPASGG-p Q8N1G0;S1191-p SDPDGGDSPLPASGG 0.133441087976541 0.0198490672400033 0.318666666666667 0.393333333333333 18.0124002627558 23.351394143729 0.318666666666667 0.393333333333333 0.0158037435509938 0.00462232614690773 3.46477529504555 4.63270008849614 Q8N1G0 ZNF687 Q8N1G0.S1191.p_ZNF687 Q8N1G0_S1191s _1_1_1191_1191 Q8N1G0 Q8N1G0 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20779.20779.4 26.06 26.06 4.664 6 1 1 0 1026.4912 4022.9653 S1191s TMT10 1167 (K) ASALGLGDGEEEAPPSRSDPDGGDsPLPASGGPLTCK (V) AS(0.0)ALGLGDGEEEAPPS(0.0)RS(0.0)DPDGGDS(0.99)PLPAS(0.0)GGPLT(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF687 131979.7 5 21 156.1 501.88 HUMAN 1 18.0124 23.3514 SDPEKPGTPGEGMLS-p O14686-3;T1868-p SDPEKPGTPGEGMLS 0.677421637236938 0.180666830284821 0.0603333333333333 0.174 3.16730301359121 9.77388139212758 0.0603333333333333 0.174 0.482247182118897 0.105344498694104 0.754193320082737 1.94168608343259 O14686 KMT2D O14686.3.T1868.p_KMT2D O14686-3_T1868t _1_1_1868_1868 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25105.25105.5 17.98 16.11 3.095 8 1 1 0 982.5092 4828.5406 T1868t TMT10 1856 (K) ASPVPSDPEKPGtPGEGMLSSDLDRISTEELPKMESK (D) AS(0.0)PVPS(0.0)DPEKPGT(0.99)PGEGMLS(0.0)S(0.0)DLDRIS(0.0)T(0.0)EELPKMES(0.0)K K:TMT10,t:Phosphorylated T KMT2D 600227.3 5 17 17.1 1042.08 HUMAN 1 3.1673 9.7739 SDPGLQKSFLDSGYR-p P18206-2;S816-p SDPGLQKSFLDSGYR 0.90518773404092 0.414511607970219 -0.0216666666666667 -0.128666666666667 0.852164127198361 5.08795953999219 -0.0216666666666667 -0.128666666666667 0.821833021348154 0.309887491180533 -0.236372868461651 -1.11992324735463 P18206 VCL P18206.2.S816.p_VCL P18206-2_S816s _1_1_816_816 P18206-2 P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16196.16196.2 12.14 9.3 3.733 3 1 1 0 627.2916 1173.6102 S816s TMT10 816 (K) sFLDSGYR (I) S(0.99)FLDS(0.0)GY(0.0)R s:Phosphorylated S VCL 117290.9 1 19 319.1 365.38 HUMAN 1 -0.8522 -5.088 SDPKKFLSITEKRAD-p Q15147-5;S855-p SDPKKFLSITEKRAD 0.0923837833274272 0.00759424447007243 -0.424 -0.453666666666667 22.0247401727823 30.2697630792376 -0.424 -0.453666666666667 0.00627373228987854 0.000939774576709017 -4.32758903656911 -6.50418950293855 Q15147 PLCB4 Q15147.5.S855.p_PLCB4 Q15147-5_S855s _1_1_855_855 Q15147-5 Q15147-4|Q15147-5|Q15147-2 Isoform 4 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19874.19874.3 10.03 10.03 1.162 2 1 1 0 578.3461 1653.0554 S855s TMT10 852 (K) KFLsITEK (R) KFLS(0.99)IT(0.0)EK K:TMT10,s:Phosphorylated S PLCB4 136983.7 2 7 1968.1 104.91 HUMAN 1 -22.0247 -30.2698 SDQEAKPSTEDLGDK-p B8ZZN6;S9-p SDQEAKPSTEDLGDK 0.203469268152067 0.212989392757002 0.260666666666667 0.139 13.4022131600148 8.83674041811493 0.260666666666667 0.139 0.045685531730521 0.13071515980638 2.58380249074144 1.77947483044232 B8ZZN6 NotFound B8ZZN6.S9.p_NotFound B8ZZN6_S2sS9s_2_2_2_9 B8ZZN6 B8ZZN6|P63165|B9A032|B8ZZJ0 Small ubiquitin-related modifier 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16718.16718.4 7.26 7.26 1.129 4 2 2 0 897.1984 3425.8458 S2s S9s Acetyl 2 (M) sDQEAKPsTEDLGDKKEGEYIK (L) S(0.99)DQEAKPS(0.99)T(0.0)EDLGDKKEGEY(0.0)IK K:TMT10,s:Phosphorylated S SUMO1 16701.5 1 4 2393.1 85.43 HUMAN 1 13.4022 8.8367 SDQLRDNSPPPAFKP-p A0A1B0GTW1;S1045-p SDQLRDNSPPPAFKP 0.744503481010559 0.900495266403675 -0.0463333333333333 0.0143333333333334 2.43044523075148 0.636963966375399 -0.0463333333333333 0.0143333333333334 0.571420052731348 0.863582043322913 -0.602149595496541 0.180142655949455 A0A1B0GTW1 NotFound A0A1B0GTW1.S1045.p_NotFound A0A1B0GTW1_S1045s _1_1_1045_1045 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11595.11807.5 20.55 14.09 1.656 3 1 1 0 655.3533 3192.7733 S1045s TMT10 1034 (R) RAASSDQLRDNsPPPAFKPEPPK (A) RAAS(0.0)S(0.0)DQLRDNS(0.99)PPPAFKPEPPK K:TMT10,s:Phosphorylated S TJP2 141123.7 19 27 41.1 827.72 HUMAN 1 -2.4304 0.637 SDQSPLQSPSNLRDN-p Q9HAU0-6;S1103-p SDQSPLQSPSNLRDN 0.378389324662461 0.361826617608752 0.158666666666667 -0.094 7.80111475996487 5.85571986339417 0.158666666666667 -0.094 0.165916097441215 0.259673728439091 1.60063930062162 -1.25852564263701 Q9HAU0 PLEKHA5 Q9HAU0.6.S1103.p_PLEKHA5 Q9HAU0-6_S1099sS1103s_2_2_1099_1103 Q9HAU0-6 Q9HAU0-6|Q9HAU0-4|Q9HAU0-2|Q9HAU0-8 Isoform 6 of Pleckstrin homology domain-containing family A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23528.23528.3 7.36 7.36 1.243 4 2 2 0 814.7281 2282.2302 S1099s S1103s TMT10 1089 (K) GLNVIGASDQsPLQsPSNLR (D) GLNVIGAS(0.0)DQS(0.99)PLQS(0.99)PS(0.0)NLR s:Phosphorylated S PLEKHA5 147692.6 3 17 374.1 338.83 HUMAN 1 7.8011 -5.8557 SDRESRRSLTNSHLE-p F8VX04;S52-p SDRESRRSLTNSHLE 0.0608497647854506 0.00167082213187757 -0.588666666666667 -0.893 26.5615956934681 44.1179530857516 -0.588666666666667 -0.893 0.00220719361252638 3.87440209991421e-05 -5.45046724340209 -12.1481932780723 F8VX04 SLC38A1 F8VX04.S52.p_SLC38A1 F8VX04_S52s _1_1_52_52 F8VX04 F8VX04|Q9H2H9 Sodium-coupled neutral amino acid transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6328.6328.3 16.89 11.81 1.847 3 1 1 0 565.6461 1614.9579 S52s Hydrogen 52 (R) sLTNSHLEKK (K) S(0.99)LT(0.0)NS(0.0)HLEKK K:TMT10-Lys-Only,s:Phosphorylated S SLC38A1 56936.1 13 3 2270.1 90.47 HUMAN 1 -26.5616 -44.118 SDRGPVRSEDESVEA-p Q9UMN6;S844-p SDRGPVRSEDESVEA 0.251728832793614 0.0421452937324321 -0.184333333333333 0.247666666666667 11.4267848924909 18.4251136752035 -0.184333333333333 0.247666666666667 0.0719981787496392 0.0143710543708497 -2.23105477895604 3.5458271827688 Q9UMN6 KMT2B Q9UMN6.S844.p_KMT2B Q9UMN6_S844s _1_1_844_844 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8675.8675.3 13.48 8.02 1.293 3 1 1 0 847.4307 2460.3095 S844s TMT10 835 (K) QISDRGPVRsEDESVEAK (R) QIS(0.0)DRGPVRS(0.99)EDES(0.0)VEAK K:TMT10,s:Phosphorylated S KMT2B 297845.7 2 9 388.1 332.76 HUMAN 1 -11.4268 18.4251 SDRKRSISESSRSGK-p Q9H307;S692-p SDRKRSISESSRSGK 0.738672985447136 0.00105021245706955 -0.0803333333333333 -2.12733333333333 2.49625636283751 50.9010768154174 -0.0803333333333334 -2.12733333333333 0.562826274822008 8.12629003143016e-06 -0.616098107911523 -16.3157345926549 Q9H307 PNN Q9H307.S692.p_PNN Q9H307_S692s _1_1_692_692 Q9H307 Q9H307|Q9H307-2 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5452.5452.2 9.84 2.73 1.317 4 1 1 0 537.756 994.5367 S692s TMT10 690 (R) SIsESSR (S) S(0.0)IS(0.99)ES(0.0)S(0.0)R s:Phosphorylated S PNN 81726.4 2 12 180.1 480.36 HUMAN 1 -2.4963 -50.9011 SDRLSMLSQEIQTLK-p Q9UHY8-2;S195-p SDRLSMLSQEIQTLK 0.18878716220005 0.896845422605359 -0.343 -0.0216666666666667 14.1768027006377 0.663658015487481 -0.343 -0.0216666666666667 0.0382225563800976 0.858290288327972 -2.72543787935304 -0.18722580828778 Q9UHY8 FEZ2 Q9UHY8.2.S195.p_FEZ2 Q9UHY8-2_S195s _1_1_195_195 Q9UHY8-2 Q9UHY8-2|G3V0F5|Q7Z674 Isoform 2 of Fasciculation and elongation protein zeta-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31470.31470.2 13.45 13.45 3.821 3 1 1 0 965.0325 1849.0869 S195s TMT10 191 (R) LSMLsQEIQTLK (R) LS(0.0)MLS(0.99)QEIQT(0.0)LK K:TMT10,s:Phosphorylated S FEZ2 42897 3 2 3458.1 50.41 HUMAN 1 -14.1768 -0.6637 SDRNPPLSPQSSIDS-p Q9P270;S247-p SDRNPPLSPQSSIDS 0.461954974649846 0.0373242977169981 -0.139 0.26 6.18585938196641 19.1891038489401 -0.139 0.26 0.240665624276634 0.0120528462086486 -1.31760610856163 3.70375607259451 Q9P270 SLAIN2 Q9P270.S247.p_SLAIN2 Q9P270_S247s _1_1_247_247 Q9P270 Q9P270|D6RIF6 SLAIN motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23634.23634.4 23.13 20.29 1.129 11 1 1 0 1016.4824 3982.9406 S247s TMT10 239 (K) SSDRNPPLsPQSSIDSELSASELDEDSIGSNYK (L) S(0.0)S(0.0)DRNPPLS(0.99)PQS(0.0)S(0.0)IDS(0.0)ELS(0.0)AS(0.0)ELDEDS(0.0)IGS(0.0)NY(0.0)K K:TMT10,s:Phosphorylated S SLAIN2 62770.5 5 11 277.1 389.63 HUMAN 1 -6.1859 19.1891 SDRNSRRSKGIAYVE-p Q14498;S193-p SDRNSRRSKGIAYVE 0.577114205340763 0.461978652704692 0.297 -0.127666666666667 4.39201525554899 4.47278499453351 0.297 -0.127666666666667 0.36374620790182 0.357043803711301 0.991360398734629 -1.00630539977664 Q14498 RBM39 Q14498.S193.p_RBM39 Q14498_S193s _1_1_193_193 Q14498 Q14498|Q14498-2|Q14498-3|G3XAC6 RNA-binding protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.35862.35862.4 18.71 16.58 4.687 5 1 1 0 786.9348 3064.7447 S193s TMT10 193 (R) sKGIAYVEFVDVSSVPLAIGLTGQR (V) S(0.99)KGIAY(0.0)VEFVDVS(0.0)S(0.0)VPLAIGLT(0.0)GQR K:TMT10,s:Phosphorylated S RBM39 59663.8 1 8 915.1 200.83 HUMAN 1 4.392 -4.4728 SDRQLSESSTKDSLK-p Q6WKZ4;S384-p SDRQLSESSTKDSLK 0.216321397365098 0.0366069010283796 -0.345333333333333 -0.422666666666667 12.8128457088808 19.3283058470136 -0.345333333333333 -0.422666666666667 0.0523257460467916 0.0116726487027943 -2.47739678293061 -3.73291308973644 Q6WKZ4 RAB11FIP1 Q6WKZ4.S384.p_RAB11FIP1 Q6WKZ4_S384s _1_1_384_384 Q6WKZ4 Q6WKZ4|Q6WKZ4-3|E7EX40|Q6WKZ4-2 Rab11 family-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13212.13212.4 10.45 10.23 1.104 5 1 1 0 523.2899 2010.1686 S384s TMT10 380 (R) QLSEsSTKDSLK (S) QLS(0.0)ES(0.99)S(0.0)T(0.0)KDS(0.0)LK K:TMT10,s:Phosphorylated S RAB11FIP1 137564.1 7 9 56.1 721.17 HUMAN 1 -12.8128 -19.3283 SDRQSWPSPAVKGRF-p Q86XL3;S875-p SDRQSWPSPAVKGRF 0.996421434325015 0.00362578188783414 0.000666666666666663 -0.613666666666667 0.0296180710645561 36.2793111918263 0.000666666666666663 -0.613666666666667 0.993203389257556 0.00023554228336215 0.00891895122549438 -8.57731397356321 Q86XL3 ANKLE2 Q86XL3.S875.p_ANKLE2 Q86XL3_S875s _1_1_875_875 Q86XL3 Q86XL3 Ankyrin repeat and LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19824.19824.4 13.54 13.54 3.74 6 1 1 0 694.1019 2693.4121 S875s TMT10 860 (K) SAVLCYSPSDRQSWPsPAVK (G) S(0.0)AVLCY(0.0)S(0.0)PS(0.0)DRQS(0.0)WPS(0.99)PAVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANKLE2 104968.3 4 11 897.1 204.02 HUMAN 1 0.0296 -36.2793 SDRRSVASSQPAKPT-p G3V1L9;S178-p SDRRSVASSQPAKPT 0.81449177054185 0.235357675893401 -0.0441666666666667 0.1595 1.70955580691243 8.27393207014198 -0.0441666666666667 0.1595 0.674597021438983 0.148801323145559 -0.443475136361875 1.68209762739311 G3V1L9 TJP1 G3V1L9.S178.p_TJP1 G3V1L9_S175sS178s_2_2_175_178 G3V1L9 G3V1L9|Q07157|G5E9E7|A0A087X0K9|Q07157-2|H0YKB1 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7672.7672.2 11.64 11.64 1.247 4 2 2 0 909.9637 1658.9841 S175s S178s Hydrogen 175 (R) sVAsSQPAKPTK (V) S(0.99)VAS(0.99)S(0.0)QPAKPT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S TJP1 197797.8 10 63 41.2 827.72 HUMAN 2 -1.7096 8.2739 SDRSGSSSPDSEITE-p P17812;S575-p SDRSGSSSPDSEITE 0.340030512994892 0.0395258109750821 -0.317 0.274 8.71502706570493 18.8210311066117 -0.317 0.274 0.134430338880013 0.0131188839209398 -1.75903365454382 3.62723274058169 P17812 CTPS1 P17812.S575.p_CTPS1 P17812_S574sS575s_2_2_574_575 P17812 P17812|P17812-2 CTP synthase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21360.21360.2 8.71 8.71 1.318 6 2 2 0 1027.9689 1895.001 S574s S575s TMT10 571 (R) SGSssPDSEITELK (F) S(0.0)GS(0.0)S(0.99)S(0.99)PDS(0.0)EIT(0.0)ELK K:TMT10,s:Phosphorylated S CTPS1 67373.8 8 3 2509.1 80.59 HUMAN 1 -8.715 18.821 SDRYSDASDDSFSEP-p Q9NRF8;S571-p SDRYSDASDDSFSEP 0.638067226462082 0.14102155293819 0.0645 0.169666666666667 3.64134249659675 11.2079316701222 0.0645 0.169666666666667 0.43238015247489 0.0757193422950823 0.847919432321196 2.19156830493989 Q9NRF8 CTPS2 Q9NRF8.S571.p_CTPS2 Q9NRF8_S568sS571s_2_2_568_571 Q9NRF8 Q9NRF8 CTP synthase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13495.13495.2 8.69 6.01 1.21 8 2 2 0 1255.5 2350.0632 S568s S571s TMT10 561 (K) LSSSDRYsDAsDDSFSEPR (I) LS(0.0)S(0.0)S(0.0)DRY(0.0)S(0.99)DAS(0.99)DDS(0.0)FS(0.0)EPR s:Phosphorylated S CTPS2 66361 2 11 2509.2 80.59 HUMAN 2 3.6413 11.2079 SDSALGDSESEDTGH-p Q8TF40;S946-p SDSALGDSESEDTGH 0.74843463214063 0.137623353898847 -0.049 -0.213666666666667 2.39304739147765 11.3507669495289 -0.049 -0.213666666666667 0.576361895347375 0.073269513020387 -0.594187207304758 -2.21664242709796 Q8TF40 FNIP1 Q8TF40.S946.p_FNIP1 Q8TF40_S946s _1_1_946_946 Q8TF40 Q8TF40|Q8TF40-3|J3KNG8|A0A087WX11 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6930.6930.3 30.16 30.16 2.423 7 1 1 0 883.6863 2569.0794 S946s TMT10 936 (R) NESSDSALGDsESEDTGHDMTR (Q) NES(0.0)S(0.0)DS(0.0)ALGDS(0.99)ES(0.0)EDT(0.0)GHDMT(0.0)R s:Phosphorylated S FNIP1 132549.9 3 21 310.1 372.19 HUMAN 1 -2.393 -11.3508 SDSDNNNSDDCGNIL-p Q03164-3;S2841-p SDSDNNNSDDCGNIL 0.298289139550046 0.0704333907532247 -0.345 0.258666666666667 9.8795462010818 15.3217607367656 -0.345 0.258666666666667 0.102812372225399 0.0293645889785595 -1.96079091961861 2.93705115278645 Q03164 KMT2A Q03164.3.S2841.p_KMT2A Q03164-3_S2841s _1_1_2841_2841 Q03164-3 Q03164-3 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36896.36896.3 19.82 19.82 4.872 4 1 1 0 1108.4984 3243.5186 S2841s TMT10 2834 (K) SDSDNNNsDDCGNILPSDIMDFVLK (N) S(0.0)DS(0.0)DNNNS(0.99)DDCGNILPS(0.0)DIMDFVLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2A 436608.3 2 33 26.1 936.8 HUMAN 1 -9.8795 15.3218 SDSDYDLSPKSMSRN-p Q08499-6;S138-p SDSDYDLSPKSMSRN 0.959999200186118 0.930980441078259 -0.0106666666666667 -0.00866666666666666 0.342870862679809 0.436995284024252 -0.0106666666666667 -0.00866666666666666 0.924087112928823 0.904274890257517 -0.0998121255401033 -0.125996636742296 Q08499 PDE4D Q08499.6.S138.p_PDE4D Q08499-6_S138s _1_1_138_138 Q08499-6 Q08499|Q08499-11|Q08499-6|Q07343|Q07343-3|A0A1B0GW84|Q08499-9 Isoform 5 of cAMP-specific 3',5'-cyclic phosphodiesterase 4D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19335.19335.3 12.69 8.47 4.839 6 1 1 0 820.7281 2380.2073 S138s TMT10 125 (R) ESFLYRSDSDYDLsPK (S) ES(0.0)FLY(0.0)RS(0.0)DS(0.0)DY(0.0)DLS(0.99)PK K:TMT10,s:Phosphorylated S PDE4D 84996.7 2 3 2699.1 73.54 HUMAN 1 -0.3429 -0.437 SDSEESGSEEEEEEE-p A0A0A0MT49;S726-p SDSEESGSEEEEEEE 0.341280214844005 0.0551895874012082 -0.135 0.288 8.6754733498562 16.7636715662754 -0.135 0.288 0.135660266227531 0.0210684624924584 -1.75218657580738 3.2138252415436 A0A0A0MT49 NotFound A0A0A0MT49.S726.p_NotFound A0A0A0MT49_S724sS726s_2_2_724_726 A0A0A0MT49 A0A0A0MT49|Q9HBD4|P51532|P51532-4 Transcription activator BRG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21799.21799.4 12.52 12.52 2.171 5 2 2 0 1080.7128 4159.8727 S724s S726s TMT10 719 (R) SDSEEsGsEEEEEEEEEEQPQAAQPPTLPVEEK (K) S(0.0)DS(0.0)EES(0.99)GS(0.99)EEEEEEEEEEQPQAAQPPT(0.0)LPVEEK K:TMT10,s:Phosphorylated S SMARCA4 189484.7 1 14 392.1 331.85 HUMAN 1 -8.6755 16.7637 SDSESNVSVKEEESS-p Q7Z6E9;S1651-p SDSESNVSVKEEESS 0.957283577168532 0.0271669948321718 -0.0153333333333333 0.444333333333333 0.369088376436911 21.2477014789278 -0.0153333333333333 0.444333333333333 0.918525383069623 0.00750291198913987 -0.107156893107004 4.14779117411688 Q7Z6E9 RBBP6 Q7Z6E9.S1651.p_RBBP6 Q7Z6E9_S1651s _1_1_1651_1651 Q7Z6E9 Q7Z6E9|Q7Z6E9-2|Q7Z6E9-4 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18100.18100.4 22.48 21.98 1.23 9 1 1 0 1098.251 4310.0199 S1651s TMT10 1631 (R) ETDEAAFEPDYNESDSESNVsVKEEESSGNISK (D) ET(0.0)DEAAFEPDY(0.0)NES(0.0)DS(0.0)ES(0.0)NVS(0.99)VKEEES(0.0)S(0.0)GNIS(0.0)K K:TMT10,s:Phosphorylated S RBBP6 202473.6 1 25 27.1 935.6 HUMAN 1 -0.3691 21.2477 SDSKLTWSPGSVTNT-p Q8NDV7;S1704-p SDSKLTWSPGSVTNT 0.564969684752459 0.020379930359248 0.103333333333333 -0.448666666666667 4.56804416320177 23.1489583325759 0.103333333333333 -0.448666666666667 0.349297585554762 0.00484288511604636 1.02426952957781 -4.58455188925118 Q8NDV7 TNRC6A Q8NDV7.S1704.p_TNRC6A Q8NDV7_S1704s _1_1_1704_1704 Q8NDV7 Q8NDV7|Q8NDV7-5 Trinucleotide repeat-containing gene 6A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30664.30664.3 16.94 16.94 1.252 6 1 1 0 889.1315 2585.4128 S1704s TMT10 1701 (K) LTWsPGSVTNTSLAHELWK (V) LT(0.0)WS(0.99)PGS(0.0)VT(0.0)NT(0.0)S(0.0)LAHELWK K:TMT10,s:Phosphorylated S TNRC6A 211092.3 2 17 181.1 478.43 HUMAN 1 4.568 -23.149 SDSKPLGSEDIDNQG-p Q14692;S403-p SDSKPLGSEDIDNQG 0.554202721246531 0.11777049096364 -0.101333333333333 0.36 4.73304167500278 12.2487279516606 -0.101333333333333 0.36 0.336275968759026 0.059583663849722 -1.05490143898687 2.37531705264878 Q14692 BMS1 Q14692.S403.p_BMS1 Q14692_S403s _1_1_403_403 Q14692 Q14692 Ribosome biogenesis protein BMS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29315.29315.5 18.86 15.85 2.586 4 1 1 0 678.7535 3309.7678 S403s TMT10 392 (R) VTLFSDSKPLGsEDIDNQGLMMPK (E) VT(0.0)LFS(0.0)DS(0.0)KPLGS(0.99)EDIDNQGLMMPK K:TMT10,s:Phosphorylated S BMS1 146660.4 2 2 1331.1 153.07 HUMAN 1 -4.733 12.2487 SDSLSVASSSREGYV-p Q5T0W9;S427-p SDSLSVASSSREGYV 0.811247020585663 0.665955953747741 0.078 -0.059 1.74598891138547 2.41634666252429 0.0779999999999999 -0.059 0.668961476653882 0.573278076627076 0.451784563036209 -0.599075764961816 Q5T0W9 FAM83B Q5T0W9.S427.p_FAM83B Q5T0W9_S427s _1_1_427_427 Q5T0W9 Q5T0W9 Protein FAM83B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8986.8986.2 8.54 8.54 1.155 6 1 1 0 929.9899 1779.0012 S427s TMT10 418 (K) KPSDSLSVAsSSR (E) KPS(0.0)DS(0.0)LS(0.0)VAS(0.99)S(0.0)S(0.0)R K:TMT10,s:Phosphorylated S FAM83B 115253.5 4 3 249.1 407.75 HUMAN 1 1.746 -2.4163 SDSPWFLSGSETLGR-p O95071;S115-p SDSPWFLSGSETLGR 0.439356541484028 0.49026413185222 -0.12 -0.073 6.57851618913054 4.13889402059446 -0.12 -0.073 0.219861092205681 0.385576536535693 -1.38701363978043 -0.943424037075701 O95071 UBR5 O95071.S115.p_UBR5 O95071_S115s _1_1_115_115 O95071 O95071|O95071-2|E7EMW7 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25712.25712.3 16.55 16.55 2.386 6 1 1 0 683.6558 1968.9864 S115s TMT10 107 (R) TSDSPWFLsGSETLGR (L) T(0.0)S(0.0)DS(0.0)PWFLS(0.99)GS(0.0)ET(0.0)LGR s:Phosphorylated S UBR5 312542 3 2 80.1 636.57 HUMAN 1 -6.5785 -4.1389 SDSSATCSADEVDEA-p Q9Y618;S922-p SDSSATCSADEVDEA 0.537081120321362 0.0176032432582518 0.115333333333333 -1.161 4.99043172141534 24.1735795821466 0.115333333333333 -1.161 0.31692523998324 0.00382509337967156 1.1023043685319 -4.83169683113315 Q9Y618 NCOR2 Q9Y618.S922.p_NCOR2 Q9Y618_S922s _1_1_922_922 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9836.9836.3 26.02 26.02 1.105 7 1 1 0 1070.7836 3130.3643 S922s TMT10 908 (K) SSGAPQDSDSSATCsADEVDEAEGGDK (N) S(0.0)S(0.0)GAPQDS(0.0)DS(0.0)S(0.0)AT(0.0)CS(0.99)ADEVDEAEGGDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NCOR2 275540.8 2 8 16.1 1053.89 HUMAN 1 4.9904 -24.1736 SDSSRPYSQEK____-p Q9UK61;S1667-p SDSSRPYSQEK____ 0.531254297514747 0.663280448342843 -0.128 0.055 5.08305986888173 2.44244651320429 -0.128 0.055 0.310237300737432 0.569843171816957 -1.11925770850587 0.604622945321547 Q9UK61 FAM208A Q9UK61.S1667.p_FAM208A Q9UK61_S1667s _1_1_1667_1667 Q9UK61 Q9UK61 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5295.5295.3 12.78 12.78 3.001 5 1 1 0 607.9654 1741.9121 S1667s TMT10 1660 (K) SDSSRPYsQEK (-) S(0.0)DS(0.0)S(0.0)RPY(0.0)S(0.99)QEK K:TMT10,s:Phosphorylated S FAM208A 190568.5 1 17 246.1 411.17 HUMAN 1 -5.0831 2.4424 SDSSTASTPVAEQIE-p Q16643-3;T392-p SDSSTASTPVAEQIE 0.182164595842396 0.0201187438985674 -0.298333333333333 -0.692666666666667 14.5523214423584 23.2470222583345 -0.298333333333333 -0.692666666666667 0.0350564436002324 0.00473475786534599 -2.79490274836568 -4.60783472715876 Q16643 DBN1 Q16643.3.T392.p_DBN1 Q16643-3_T392t_1_1_392_392 Q16643-3 Q16643-3|Q16643-2|D6R9Q9 Isoform 3 of Drebrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14567.14567.3 12.14 12.14 1.246 9 1 1 0 1051.175 3055.5567 M374m T392t TMT10 374 (R) mAPTPIPTRSPSDSSTAStPVAEQIER (A) M(1.0)APT(0.0)PIPT(0.0)RS(0.0)PS(0.0)DS(0.0)S(0.0)T(0.0)AS(0.0)T(0.99)PVAEQIER m:Oxidized methionine,t:Phosphorylated T DBN1 76925.9 2 6 1729.1 119.21 HUMAN 1 -14.5523 -23.247 SDSTDLASPKTMGNR-p Q96AV8;S638-p SDSTDLASPKTMGNR 0.827721689148675 0.0016939373039229 0.0343333333333333 -0.834666666666667 1.57969788682779 44.0262514097558 0.0343333333333333 -0.834666666666667 0.695072668031566 3.95708026031161e-05 0.413571369503002 -12.0994786808368 Q96AV8 E2F7 Q96AV8.S638.p_E2F7 Q96AV8_S638s _1_1_638_638 Q96AV8 Q96AV8|Q96AV8-3|Q96AV8-2 Transcription factor E2F7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10732.10732.3 11.81 7.36 4.571 4 1 1 0 671.7014 1933.1209 S638s TMT10 629 (K) KPSDSTDLAsPK (T) KPS(0.0)DS(0.0)T(0.0)DLAS(0.99)PK K:TMT10,s:Phosphorylated S E2F7 100342.7 2 5 2042.1 101.08 HUMAN 1 1.5797 -44.0263 SDSTSVASFPSADET-p Q13464;S1105-p SDSTSVASFPSADET 0.552918441896641 0.350470585251074 0.082 0.0936666666666667 4.74907813083981 6.03774283284925 0.082 0.0936666666666667 0.335036549221825 0.249015119313812 1.05786807707595 1.29097546117311 Q13464 ROCK1 Q13464.S1105.p_ROCK1 Q13464_S1105sS1108s_2_2_1105_1108 Q13464 Q13464 Rho-associated protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30536.30746.3 21.25 21.25 3.511 8 2 2 0 1071.4807 3052.4796 S1105s S1108s TMT10 1094 (K) LLDLSDSTSVAsFPsADETDGNLPESR (I) LLDLS(0.0)DS(0.0)T(0.0)S(0.0)VAS(0.99)FPS(0.99)ADET(0.0)DGNLPES(0.0)R s:Phosphorylated S ROCK1 159198.9 1 9 2757.1 71.63 HUMAN 1 4.7491 6.0377 SDSVSGQTVVDPKGY-p O94906;T266-p SDSVSGQTVVDPKGY 0.472379749153772 0.00371744391183794 -0.104666666666667 0.761 6.00653908647903 36.058287609854 -0.104666666666667 0.761 0.250810717946833 0.000247839907893145 -1.28572839482627 8.49208683616209 O94906 PRPF6 O94906.T266.p_PRPF6 O94906_T266t _1_1_266_266 O94906 O94906|O94906-2 Pre-mRNA-processing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17967.18182.3 18.44 14.89 2.621 5 1 1 0 762.0668 2204.2174 T266t TMT10 255 (R) LSQVSDSVSGQtVVDPK (G) LS(0.0)QVS(0.0)DS(0.0)VS(0.0)GQT(0.99)VVDPK K:TMT10,t:Phosphorylated T PRPF6 107721.8 2 6 1650.1 123.56 HUMAN 1 -6.0065 36.0583 SDTDGLDSVEAAAPP-p Q9P2K8;S695-p SDTDGLDSVEAAAPP 0.93698049113563 0.745434440541611 0.017 -0.035 0.549317114923221 1.76091878409207 0.017 -0.035 0.881187420113031 0.666665715924547 0.156666074823591 -0.455129181139666 Q9P2K8 EIF2AK4 Q9P2K8.S695.p_EIF2AK4 Q9P2K8_S695s _1_1_695_695 Q9P2K8 Q9P2K8|Q9P2K8-2 eIF-2-alpha kinase GCN2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28728.28728.4 20.28 20.28 6.523 9 1 1 0 931.4335 3642.7609 S695s TMT10 684 (R) GQPASDTDGLDsVEAAAPPPILSSSVEWSTSGER (S) GQPAS(0.0)DT(0.0)DGLDS(0.99)VEAAAPPPILS(0.0)S(0.0)S(0.0)VEWS(0.0)T(0.0)S(0.0)GER s:Phosphorylated S EIF2AK4 188390.5 1 4 1647.1 123.7 HUMAN 1 0.5493 -1.7609 SDTESIPSPHTEAAK-p Q9Y618;S753-p SDTESIPSPHTEAAK 0.491091158286831 0.400440334834717 -0.0913333333333333 0.093 5.68692107694273 5.28534894210102 -0.0913333333333333 0.093 0.269965266816217 0.296118203407469 -1.22858386535241 1.15585706215877 Q9Y618 NCOR2 Q9Y618.S753.p_NCOR2 Q9Y618_S745sS746sS753s_3_3_745_753 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14170.14170.4 13.58 13.58 0 8 3 3 0 861.3655 3201.537 N744n S745s S746s S753s TMT10 734 (R) GECSGPATVNnssDTESIPsPHTEAAK (D) GECS(0.0)GPAT(0.0)VN(0.50)N(0.50)S(0.99)S(0.99)DT(0.0)ES(0.0)IPS(0.99)PHT(0.0)EAAK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S NCOR2 275540.8 2 50 16.1 1053.89 HUMAN 1 -5.6869 5.2853 SDTESWMSPLAWLEK-p Q96R06;S341-p SDTESWMSPLAWLEK 0.342035741870036 0.00608899043357202 -0.143333333333333 -0.509666666666667 8.65988047685589 31.9651668420073 -0.143333333333333 -0.509666666666667 0.136148215160152 0.000636038369814215 -1.74948725048947 -7.04090581142275 Q96R06 SPAG5 Q96R06.S341.p_SPAG5 Q96R06_S341s _1_1_341_341 Q96R06 Q96R06 Sperm-associated antigen 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.37398.37398.3 18.74 18.74 3.303 4 1 1 0 867.7752 2521.3413 S341s TMT10 331 (R) ILGSDTESWMsPLAWLEK (G) ILGS(0.0)DT(0.0)ES(0.0)WMS(0.99)PLAWLEK K:TMT10,s:Phosphorylated S SPAG5 135788.8 2 9 612.1 261.64 HUMAN 1 -8.6599 -31.9652 SDTSEVISPQPDEVQ-p Q4AC94;S2099-p SDTSEVISPQPDEVQ 0.58471981560589 0.981835145804689 0.082 -0.00333333333333332 4.28598227023503 0.114637466006127 0.082 -0.00333333333333334 0.372736371357094 0.97394908383206 0.971415677534544 -0.0341899265913565 Q4AC94 C2CD3 Q4AC94.S2099.p_C2CD3 Q4AC94_S2099s _1_1_2099_2099 Q4AC94 Q4AC94 C2 domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26822.26822.3 17.8 17.8 1.164 8 1 1 0 985.1359 2873.4366 S2099s TMT10 2084 (K) TSPWSSVISDTSEVIsPQPDEVQR (E) T(0.0)S(0.0)PWS(0.0)S(0.0)VIS(0.0)DT(0.0)S(0.0)EVIS(0.99)PQPDEVQR s:Phosphorylated S C2CD3 262780.3 1 10 722.1 237.14 HUMAN 1 4.286 -0.1146 SDTTLHCSDGEGAAS-p P49796;S965-p SDTTLHCSDGEGAAS 0.597271895016862 0.00382266961587119 -0.07 -0.670666666666667 4.13423908774509 35.8199373838227 -0.07 -0.670666666666667 0.385990033641781 0.000261822075721194 -0.942704103152211 -8.40101411960389 P49796 RGS3 P49796.S965.p_RGS3 P49796_S965s _1_1_965_965 P49796 P49796|P49796-6|P49796-4|P49796-1 Regulator of G-protein signaling 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22491.22491.4 30.19 30.19 4.658 9 1 1 0 1030.9924 4040.9759 S965s TMT10 953 (R) GPCFASDTTLHCsDGEGAASTWGMPSPSTLKK (E) GPCFAS(0.0)DT(0.0)T(0.0)LHCS(0.99)DGEGAAS(0.0)T(0.0)WGMPS(0.0)PS(0.0)T(0.0)LKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RGS3 134216.1 4 10 1029.1 186.27 HUMAN 1 -4.1342 -35.8199 SDVDDDMSGDEKQDN-p Q93008;S1600-p SDVDDDMSGDEKQDN 0.718947568381735 0.0340474106016949 0.066 0.416333333333333 2.70391315129187 19.7830623810817 0.066 0.416333333333333 0.536548129116445 0.0105122035562851 0.659604238844945 3.82901366771901 Q93008 USP9X Q93008.S1600.p_USP9X Q93008_S1600s _1_1_1600_1600 Q93008 Q93008|Q93008-1 Probable ubiquitin carboxyl-terminal hydrolase FAF-X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20200.20200.3 21.67 15.25 3.576 4 1 1 0 1310.9226 3850.7925 S1600s TMT10 1583 (R) NGILAIEGTGSDVDDDMsGDEKQDNESNVDPR (D) NGILAIEGT(0.0)GS(0.0)DVDDDMS(0.99)GDEKQDNES(0.0)NVDPR K:TMT10,s:Phosphorylated S USP9X 295697.8 7 4 1218.1 165.22 HUMAN 1 2.7039 19.7831 SDVSASESPQHDVVD-p Q8N9M5;S218-p SDVSASESPQHDVVD 0.470204260758744 0.618028835500003 -0.115666666666667 -0.0496666666666667 6.04802235565742 2.84034357583306 -0.115666666666667 -0.0496666666666667 0.248426410571479 0.519954860622655 -1.29311386727991 -0.687699818577348 Q8N9M5 TMEM102 Q8N9M5.S218.p_TMEM102 Q8N9M5_S218s _1_1_218_218 Q8N9M5 Q8N9M5 Transmembrane protein 102 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19836.19836.3 22.64 22.64 2.247 7 1 1 0 1021.1781 2981.5468 S218s TMT10 209 (K) SPSDVSASEsPQHDVVDLGSTAPLK (T) S(0.0)PS(0.0)DVS(0.0)AS(0.0)ES(0.99)PQHDVVDLGS(0.0)T(0.0)APLK K:TMT10,s:Phosphorylated S TMEM102 54801.4 3 1 3827.1 42.2 HUMAN 1 -6.048 -2.8403 SDVSDIGSDNCSLAD-p Q5TH69;S632-p SDVSDIGSDNCSLAD 0.646466566739135 0.0343129908746764 0.0823333333333333 0.459666666666667 3.54766029745548 19.7335409076608 0.0823333333333334 0.459666666666667 0.441808401526879 0.0106327575035516 0.829612711580681 3.81848479949392 Q5TH69 ARFGEF3 Q5TH69.S632.p_ARFGEF3 Q5TH69_S632s _1_1_632_632 Q5TH69 Q5TH69 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11088.11088.2 21.96 21.96 5.224 5 1 1 0 1187.9708 2294.9677 S632s Hydrogen 625 (R) SDVSDIGsDNCSLADEEQTPR (D) S(0.0)DVS(0.0)DIGS(0.99)DNCS(0.0)LADEEQT(0.0)PR C:Carbamidomethylation,s:Phosphorylated S ARFGEF3 244013.5 4 3 618.1 260.46 HUMAN 1 3.5477 19.7335 SDVSSPRSITSTPLS-p Q9P0K7;S293-p SDVSSPRSITSTPLS 0.126572282263763 0.00849347474824415 -0.391 -0.632666666666667 18.6288327510563 29.3942358625021 -0.391 -0.632666666666667 0.0137125026620714 0.0011496785105945 -3.59066591319391 -6.24028564180863 Q9P0K7 RAI14 Q9P0K7.S293.p_RAI14 Q9P0K7_S293s _1_1_293_293 Q9P0K7 Q9P0K7-2|Q9P0K7-3|Q9P0K7-4 Ankycorbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15989.15989.2 12.44 12.44 3.352 5 1 1 0 764.9224 1448.8725 S293s TMT10 293 (R) sITSTPLSGK (E) S(0.99)IT(0.0)S(0.0)T(0.0)PLS(0.0)GK K:TMT10,s:Phosphorylated S RAI14 110666.9 4 7 498.1 292.24 HUMAN 1 -18.6288 -29.3942 SDYDYHSSSEKLKER-p A0A1B0GTW1;S490-p SDYDYHSSSEKLKER 0.0780301070491484 0.00231833552407385 0.923333333333333 -0.837333333333333 23.6696786841401 40.5795212035493 0.923333333333333 -0.837333333333333 0.00429568207498432 8.75080244843722e-05 4.71454734885817 -10.3951219953173 A0A1B0GTW1 NotFound A0A1B0GTW1.S490.p_NotFound A0A1B0GTW1_S489sS490s_2_2_489_490 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9987.9987.4 15.77 15.77 1.198 7 2 2 0 709.3306 2674.3716 S489s S490s TMT10 480 (R) HQYSDYDYHssSEKLK (E) HQY(0.0)S(0.0)DY(0.0)DY(0.0)HS(0.99)S(0.99)S(0.0)EKLK K:TMT10,s:Phosphorylated S TJP2 141123.7 7 34 41.1 827.72 HUMAN 1 23.6697 -40.5795 SDYEKPETPERVLKT-p O95340-2;T187-p SDYEKPETPERVLKT 0.134738301810513 0.186117509613327 0.685 -0.172 17.867537519306 9.60376217020355 0.685 -0.172 0.0163397816255896 0.109552875940359 3.43550692038024 -1.91220584445734 O95340 PAPSS2 O95340.2.T187.p_PAPSS2 O95340-2_T187t _1_1_187_187 O95340-2 O95340-2 Isoform B of Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15710.15710.3 14.57 9.55 3.568 4 1 1 0 827.0677 2399.2131 T187t TMT10 174 (K) GFTGIDSDYEKPEtPER (V) GFT(0.0)GIDS(0.0)DY(0.0)EKPET(0.99)PER K:TMT10,t:Phosphorylated T PAPSS2 70539.6 1 2 4549.1 29.99 HUMAN 1 17.8675 -9.6038 SEAAAFDSDESEAVG-p Q8IX03-2;S651-p SEAAAFDSDESEAVG 0.340105250121122 0.405630916385282 -0.160666666666667 0.160333333333333 8.71315849977776 5.21599475269773 -0.160666666666667 0.160333333333333 0.134488190408664 0.300884991204431 -1.75871019514274 1.14325737748702 Q8IX03 WWC1 Q8IX03.2.S651.p_WWC1 Q8IX03-2_S651s _1_1_651_651 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18783.18783.3 23.12 23.12 1.824 4 1 1 0 788.3574 2283.0938 S651s TMT10 641 (R) LGASEAAAFDsDESEAVGATR (I) LGAS(0.0)EAAAFDS(0.99)DES(0.0)EAVGAT(0.0)R s:Phosphorylated S WWC1 126701.1 2 11 312.1 370.85 HUMAN 1 -8.7132 5.216 SEAADSKSLVLENVT-p A0A0J9YWL0;S825-p SEAADSKSLVLENVT 0.2734486714236 0.423321848251142 -0.271333333333333 0.0956666666666667 10.6620666145854 4.97011341186778 -0.271333333333333 0.0956666666666667 0.0858604852357554 0.318411437052614 -2.09700624430098 1.09835749482587 A0A0J9YWL0 NotFound A0A0J9YWL0.S825.p_NotFound A0A0J9YWL0_S825s _1_1_825_825 A0A0J9YWL0 A0A0J9YWL0|Q9Y4K1 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27833.27833.4 22.57 22.57 1.207 8 1 1 0 990.7504 3880.0166 S825s TMT10 816 (K) EDSEAADSKsLVLENVTDTAQDIPTTVDTK (D) EDS(0.0)EAADS(0.0)KS(0.99)LVLENVT(0.0)DT(0.0)AQDIPT(0.0)T(0.0)VDT(0.0)K K:TMT10,s:Phosphorylated S CRYBG1 233643.7 3 22 79.1 640.71 HUMAN 1 -10.6621 4.9701 SEAARWNSKENLLAG-p P00519-2;S69-p SEAARWNSKENLLAG 0.461449271051433 0.113430877564924 0.160666666666667 -0.273 6.19367436009352 12.4660606635481 0.160666666666667 -0.273 0.240232944270666 0.0566753138309744 1.31899262874184 -2.41402421881786 P00519 ABL1 P00519.2.S69.p_ABL1 P00519-2_S69s _1_1_69_69 P00519-2 P00519-2 Isoform IB of Tyrosine-protein kinase ABL1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.37296.37296.4 26.58 24.63 5.103 7 1 1 0 1202.6216 4727.4812 S69s TMT10 67 (R) WNsKENLLAGPSENDPNLFVALYDFVASGDNTLSITK (G) WNS(0.99)KENLLAGPS(0.0)ENDPNLFVALY(0.0)DFVAS(0.0)GDNT(0.0)LS(0.0)IT(0.0)K K:TMT10,s:Phosphorylated S ABL1 125637.1 3 2 347.1 352.28 HUMAN 1 6.1937 -12.4661 SEAASEESNSEIEQE-p Q9NR30;S171-p SEAASEESNSEIEQE 0.844490429219358 0.715698318721438 -0.0311666666666667 -0.0373333333333333 1.41923182984616 1.99802739573379 -0.0311666666666667 -0.0373333333333333 0.721235038306585 0.631243996027708 -0.375966655477119 -0.508306153571832 Q9NR30 DDX21 Q9NR30.S171.p_DDX21 Q9NR30_S171sS173s_2_2_171_173 Q9NR30 Q9NR30|Q9NR30-2 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21581.21581.4 21.42 17.13 2.119 4 2 2 0 1079.2234 4152.9344 S171s N172n S173s TMT10 152 (K) NGFPHPEPDCNPSEAASEEsnsEIEQEIPVEQK (E) N(0.0)GFPHPEPDCN(0.0)PS(0.0)EAAS(0.0)EES(0.99)N(0.99)S(0.99)EIEQEIPVEQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated DDX21 87856.3 34 27 103.1 590.75 HUMAN 2 -1.4192 -1.998 SEAESHVSGISRIVL-p Q5QJE6;S148-p SEAESHVSGISRIVL 0.774604847043055 0.447928014708607 0.042 0.0736666666666667 2.12362212683281 4.64922127701725 0.042 0.0736666666666667 0.613250325392858 0.3428292529238 0.536008273852537 1.03916746920018 Q5QJE6 DNTTIP2 Q5QJE6.S148.p_DNTTIP2 Q5QJE6_S141sS145sS148s_3_3_141_148 Q5QJE6 Q5QJE6|J3KP30 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26058.26476.3 10.26 10.26 2.335 7 3 3 0 893.3684 2438.1884 S141s S145s S148s TMT10 133 (K) ESYTEEIVsEAEsHVsGISR (I) ES(0.0)Y(0.0)T(0.0)EEIVS(0.99)EAES(0.99)HVS(0.99)GIS(0.0)R s:Phosphorylated S DNTTIP2 84866.9 1 23 448.1 309.47 HUMAN 1 2.1236 4.6492 SEAGHASSPDSEVTS-p Q6NZY4;S598-p SEAGHASSPDSEVTS 0.222584517889466 0.544120842159125 0.184 0.075 12.5521610016694 3.55384505325366 0.184 0.0750000000000001 0.0555627714222248 0.441179673219286 2.43067312989494 0.830694877550064 Q6NZY4 ZCCHC8 Q6NZY4.S598.p_ZCCHC8 Q6NZY4_S598s _1_1_598_598 Q6NZY4 Q6NZY4|Q6NZY4-2 Zinc finger CCHC domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12336.12336.3 17.26 17.26 1.137 6 1 1 0 843.3975 2448.2077 S598s TMT10 591 (K) SEAGHASsPDSEVTSLCQK (E) S(0.0)EAGHAS(0.0)S(0.99)PDS(0.0)EVT(0.0)S(0.0)LCQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZCCHC8 79203.5 3 11 443.1 311.3 HUMAN 1 12.5522 3.5538 SEAGSQDSGDGAVGS-p Q13409-2;S98-p SEAGSQDSGDGAVGS 0.297363648018023 0.704154488403536 0.224 0.0716666666666667 9.9068393683625 2.09268874365766 0.224 0.0716666666666667 0.102168275543419 0.61763390082722 1.96552972233106 0.52916966957189 Q13409 DYNC1I2 Q13409.2.S98.p_DYNC1I2 Q13409-2_S95sS98s_2_2_95_98 Q13409-2 Q13409|Q13409-5|Q13409-2|Q13409-7 Isoform 2B of Cytoplasmic dynein 1 intermediate chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9194.9194.3 13.37 13.37 3.161 7 2 2 0 780.6578 2180.0265 S95s S98s TMT10 86 (K) SVSTPSEAGsQDsGDGAVGSR (T) S(0.0)VS(0.0)T(0.0)PS(0.0)EAGS(0.99)QDS(0.99)GDGAVGS(0.0)R s:Phosphorylated S DYNC1I2 71042.8 1 10 1616.1 127.25 HUMAN 1 9.9068 2.0927 SEAKIQLSDSEAKSH-p Q9Y2M0;S317-p SEAKIQLSDSEAKSH 0.407878856431238 0.0177570537854108 -0.149666666666667 -0.435 7.18876584772242 24.1178492954772 -0.149666666666667 -0.435 0.191039606645007 0.00387449469378288 -1.49401690702131 -4.81803028979037 Q9Y2M0 FAN1 Q9Y2M0.S317.p_FAN1 Q9Y2M0_S317s _1_1_317_317 Q9Y2M0 Q9Y2M0|Q9Y2M0-2|H3BQ24 Fanconi-associated nuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15019.15019.2 11.41 4.6 1.355 2 1 1 0 764.9049 1448.8361 S317s TMT10 314 (K) IQLsDSEAK (S) IQLS(0.99)DS(0.0)EAK K:TMT10,s:Phosphorylated S FAN1 116048.4 2 6 1860.1 110.7 HUMAN 1 -7.1888 -24.1178 SEANSIQSANATTKT-p Q8N488;S130-p SEANSIQSANATTKT 0.142827912098432 0.142866565520357 0.269333333333333 0.174333333333333 17.2622311554383 11.1356886203121 0.269333333333333 0.174333333333333 0.0187835157979896 0.0769894359699986 3.31446324820548 2.17890170633588 Q8N488 RYBP Q8N488.S130.p_RYBP Q8N488_S130s _1_1_130_130 Q8N488 Q8N488 RING1 and YY1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17378.17660.4 17.97 14.63 2.426 6 1 1 0 764.4065 2974.63 S130s TMT10 115 (K) SDILKDPPSEANSIQsANATTK (T) S(0.0)DILKDPPS(0.0)EANS(0.0)IQS(0.99)ANAT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S RYBP 25049.3 1 4 2169.1 94.66 HUMAN 1 17.2622 11.1357 SEAQPPESPETRLGQ-p Q9Y6A5;S434-p SEAQPPESPETRLGQ 0.922642065307985 0.710363521107458 0.02 -0.0356666666666667 0.685283269246258 2.04170607395149 0.02 -0.0356666666666667 0.854027141549705 0.624927149389927 0.192958468982967 -0.517957865245175 Q9Y6A5 TACC3 Q9Y6A5.S434.p_TACC3 Q9Y6A5_S434s _1_1_434_434 Q9Y6A5 Q9Y6A5 Transforming acidic coiled-coil-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5517.5517.3 13.58 13.58 2.631 4 1 1 0 647.6135 1860.8595 S434s TMT10 424 (K) SGCSEAQPPEsPETR (L) S(0.0)GCS(0.0)EAQPPES(0.99)PET(0.0)R C:Carbamidomethylation,s:Phosphorylated S TACC3 91213.8 2 8 1278.1 159 HUMAN 1 0.6853 -2.0417 SEAQSNLSGGENRVQ-p Q6ISB3;S108-p SEAQSNLSGGENRVQ 0.393892217649771 0.987148699475048 0.182 0.00200000000000002 7.46752620728175 0.0844612168118028 0.182 0.00200000000000003 0.179162609484423 0.98073997680169 1.54262816650275 0.0252747305336063 Q6ISB3 GRHL2 Q6ISB3.S108.p_GRHL2 Q6ISB3_S108s _1_1_108_108 Q6ISB3 Q6ISB3|Q6ISB3-2 Grainyhead-like protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13133.13133.4 15.54 14.61 2.629 4 1 1 0 789.6564 3075.637 S108s TMT10 95 (K) RNCLGTSEAQSNLsGGENRVQVLK (T) RNCLGT(0.0)S(0.0)EAQS(0.0)NLS(0.99)GGENRVQVLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GRHL2 71446.2 6 3 651.1 254.16 HUMAN 1 7.4675 0.0845 SECDQAGSSDMEADM-p A0A0U1RRH6;S781-p SECDQAGSSDMEADM 0.152872172873321 0.30961316318236 0.333 0.299 16.40038355417 6.72995446697971 0.333 0.299 0.0229066534003341 0.212326672298764 3.14545057618291 1.41327987152045 A0A0U1RRH6 NotFound A0A0U1RRH6.S781.p_NotFound A0A0U1RRH6_S781sS782s_2_2_781_782 A0A0U1RRH6 A0A0U1RRH6|O94880|O94880-2 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22529.22529.4 22.04 22.04 3.967 7 2 2 0 1076.9327 4128.7754 S781s S782s M784m TMT10 768 (K) NSYWQCSECDQAGssDmEADMAMETLPDGTKR (S) NS(0.0)Y(0.0)WQCS(0.0)ECDQAGS(0.99)S(0.99)DM(0.99)EADM(0.0)AM(0.0)ET(0.0)LPDGT(0.0)KR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,m:Oxidized methionine PHF14 109152.4 8 24 126.1 543.2 HUMAN 1 16.4004 6.73 SECSLIASSPEENWP-p Q9ULH0-4;S1642-p SECSLIASSPEENWP 0.651183474642633 0.962872227289093 0.0856666666666667 0.00600000000000002 3.49238554724364 0.234277187984198 0.0856666666666667 0.00600000000000003 0.447467446123045 0.947484864715577 0.818763649458665 0.0689710793269175 Q9ULH0 KIDINS220 Q9ULH0.4.S1642.p_KIDINS220 Q9ULH0-4_S1642sS1643s_2_2_1642_1643 Q9ULH0-4 Q9ULH0|Q9ULH0-4|Q9ULH0-2|Q9ULH0-5 Isoform 4 of Kinase D-interacting substrate of 220 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20496.20496.4 11.18 11.18 11.184 5 2 2 0 839.1462 3192.6272 S1642s S1643s N1647n TMT10 1632 (K) KSPSECSLIAssPEEnWPACQK (A) KS(0.0)PS(0.0)ECS(0.0)LIAS(0.99)S(0.99)PEEN(1.0)WPACQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated KIDINS220 196163.1 1 26 306.1 373.6 HUMAN 1 3.4924 0.2343 SEDDDEDTEEEQGEE-p Q5C9Z4;T287-p SEDDDEDTEEEQGEE 0.265496929072473 0.646451769518778 -0.388666666666667 -0.056 10.9174495257859 2.58302760370214 -0.388666666666667 -0.056 0.0809571195174386 0.551692702820539 -2.14165336396902 -0.634286771945549 Q5C9Z4 NOM1 Q5C9Z4.T287.p_NOM1 Q5C9Z4_S280sT287t_2_2_280_287 Q5C9Z4 Q5C9Z4 Nucleolar MIF4G domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8454.8454.3 19.82 19.82 99 2 2 2 0 1196.1753 3426.5759 S280s T287t TMT10 272 (K) KAQEAEAQsEDDDEDtEEEQGEEK (E) KAQEAEAQS(1.0)EDDDEDT(1.0)EEEQGEEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T NOM1 96826.2 3 5 2040.1 101.14 HUMAN 1 -10.9174 -2.583 SEDEAGCSSVDEESY-p Q7L4I2;S383-p SEDEAGCSSVDEESY 0.70799170433049 0.012032742021195 -0.0666666666666667 0.91 2.8200402368582 26.8120735162268 -0.0666666666666667 0.91 0.522391349084065 0.0020834958914032 -0.683617258630356 5.51031435747476 Q7L4I2 RSRC2 Q7L4I2.S383.p_RSRC2 Q7L4I2_S383s _1_1_383_383 Q7L4I2 Q7L4I2|Q7L4I2-2 Arginine/serine-rich coiled-coil protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10153.10153.2 13.67 13.67 1.109 5 1 1 0 1165.4963 2250.012 S383s TMT10 376 (K) SEDEAGCsSVDEESYK (T) S(0.0)EDEAGCS(0.99)S(0.0)VDEES(0.0)Y(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RSRC2 50615.9 2 8 1070.1 180.75 HUMAN 1 -2.82 26.8121 SEDEEDDSSGEEVVI-p P19338;S41-p SEDEEDDSSGEEVVI 0.53052591129584 0.0101099102642081 -0.1095 0.619833333333333 5.09552193282867 28.0229422388311 -0.1095 0.619833333333333 0.30934835198854 0.00157654283863141 -1.12153453388445 5.84396628986656 P19338 NCL P19338.S41.p_NCL P19338_S41sS42s_2_2_41_42 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20335.20335.5 29.39 29.39 5.29 4 2 2 0 1028.6677 4979.3843 S41s S42s TMT10 17 (K) MAPPPKEVEEDSEDEEMSEDEEDDssGEEVVIPQKK (G) MAPPPKEVEEDS(0.0)EDEEMS(0.0)EDEEDDS(0.99)S(0.99)GEEVVIPQKK K:TMT10,s:Phosphorylated S NCL 76670.1 7 24 114.1 570.88 HUMAN 2 -5.0955 28.0229 SEDGLDDSNPLLPQS-p Q9ULG1;S58-p SEDGLDDSNPLLPQS 0.656070561836029 0.122804689945719 -0.0616666666666667 0.191 3.43469731655536 12.0133325688974 -0.0616666666666667 0.191 0.453450900137169 0.062902331509922 -0.807402069748867 2.33353376884877 Q9ULG1 INO80 Q9ULG1.S58.p_INO80 Q9ULG1_S58s_1_1_58_58 Q9ULG1 Q9ULG1|H0YMN5 DNA helicase INO80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30057.30057.4 14.79 9.87 4.237 5 1 1 0 902.6929 3526.7801 S58s N59n TMT10 45 (R) NISSDDSEDGLDDsnPLLPQSGDPLIQVK (E) N(0.0)IS(0.0)S(0.0)DDS(0.0)EDGLDDS(0.99)N(0.99)PLLPQS(0.0)GDPLIQVK K:TMT10,s:Phosphorylated S,n:Deamidated INO80 177663 2 2 3307.1 54.31 HUMAN 1 -3.4347 12.0133 SEDGQVFSPKKGQKK-p Q5T200;S993-p SEDGQVFSPKKGQKK 0.165718424751192 0.00153742933174576 -0.235333333333333 -0.9 15.613178632053 45.3497280189053 -0.235333333333333 -0.9 0.0274588368574919 2.91760972639399e-05 -2.99426397624862 -12.8206940974425 Q5T200 ZC3H13 Q5T200.S993.p_ZC3H13 Q5T200_S993s _1_1_993_993 Q5T200 Q5T200 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16382.16382.3 19.68 19.68 9.004 4 1 1 0 749.704 2167.1283 S993s TMT10 980 (R) GNIETTSEDGQVFsPK (K) GNIET(0.0)T(0.0)S(0.0)EDGQVFS(0.99)PK K:TMT10,s:Phosphorylated S ZC3H13 197316.7 10 19 24.1 987.82 HUMAN 1 -15.6132 -45.3497 SEDGRALSDREEEEE-p Q8N3E9;S496-p SEDGRALSDREEEEE 0.912946068007014 0.0282928627273433 0.019 0.415 0.771134982736804 20.978903193269 0.019 0.415 0.837310431297544 0.00798196245544989 0.215441878010765 4.08818774726007 Q8N3E9 PLCD3 Q8N3E9.S496.p_PLCD3 Q8N3E9_S496s _1_1_496_496 Q8N3E9 Q8N3E9 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13434.13434.3 20.39 14.25 99 1 1 1 0 1134.4825 3321.4676 S496s TMT10 494 (R) ALsDREEEEEDDEEEEEEVEAAAQRR (L) ALS(1.0)DREEEEEDDEEEEEEVEAAAQRR s:Phosphorylated S PLCD3 90169.7 2 6 1567.1 131.06 HUMAN 1 0.7711 20.9789 SEDGRRGSALGPDEA-p O75145;S17-p SEDGRRGSALGPDEA 0.584672854353861 0.874348555147037 0.0723333333333333 0.0223333333333334 4.28964311052347 0.820506102666951 0.0723333333333333 0.0223333333333334 0.372422309485224 0.827845685552884 0.972105861298489 0.228205777548165 O75145 PPFIA3 O75145.S17.p_PPFIA3 O75145_S17s _1_1_17_17 O75145 O75145|O75145-2|R4GN36 Liprin-alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7407.7407.3 18.41 18.41 99 1 1 1 0 565.2567 1613.7878 S17s Hydrogen 15 (R) RGsALGPDEAGGELER (L) RGS(1.0)ALGPDEAGGELER s:Phosphorylated S PPFIA3 134064.6 5 1 248.2 410.18 HUMAN 1 4.2896 0.8205 SEDGTLRSLEPEPQQ-p Q8IV36;S640-p SEDGTLRSLEPEPQQ 0.0961571674234334 0.673105507813863 0.363666666666667 0.0646666666666667 21.5750867182505 2.35168915338999 0.363666666666667 0.0646666666666667 0.00695811060874462 0.581876857438532 4.22543296440722 0.585277996177944 Q8IV36 HID1 Q8IV36.S640.p_HID1 Q8IV36_S640s _1_1_640_640 Q8IV36 Q8IV36 Protein HID1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18255.18255.4 17.54 13.54 1.147 7 1 1 0 1084.2799 4254.1315 S640s TMT10 630 (K) SQVSEDGTLRsLEPEPQQSLEDGSPAKGEPSQAWR (E) S(0.0)QVS(0.0)EDGT(0.0)LRS(0.99)LEPEPQQS(0.0)LEDGS(0.0)PAKGEPS(0.0)QAWR K:TMT10,s:Phosphorylated S HID1 89370.5 1 7 589.1 264.44 HUMAN 1 21.5751 2.3517 SEDISHITPTQGFNI-p P36405;T46-p SEDISHITPTQGFNI 0.117612251860766 0.423449001975383 0.302666666666667 0.0923333333333333 19.3364891921947 4.9680822577556 0.302666666666667 0.0923333333333334 0.0116506748165708 0.318560389891756 3.73797852105389 1.09798502396949 P36405 ARL3 P36405.T46.p_ARL3 P36405_T46t _1_1_46_46 P36405 P36405 ADP-ribosylation factor-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22294.22294.3 23.52 23.52 2.809 4 1 1 0 879.7947 2557.4026 T46t TMT10 36 (K) QLASEDISHItPTQGFNIK (S) QLAS(0.0)EDIS(0.0)HIT(0.99)PT(0.0)QGFNIK K:TMT10,t:Phosphorylated T ARL3 20626.3 3 2 4177.1 36 HUMAN 1 19.3365 4.9681 SEDLDGHSDPEESFA-p Q86VR2;S320-p SEDLDGHSDPEESFA 0.0717004271880835 0.108527077221696 0.388333333333333 0.182666666666667 24.7244586236635 12.7423667457431 0.388333333333333 0.182666666666667 0.00336941215039034 0.0531818358768768 4.97432742597846 2.4634250987517 Q86VR2 FAM134C Q86VR2.S320.p_FAM134C Q86VR2_S320s _1_1_320_320 Q86VR2 Q86VR2|K7EQI9|Q86VR2-2 Reticulophagy regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16167.16599.3 23.25 23.25 4.284 5 1 1 0 961.7574 2803.2856 S320s TMT10 305 (R) GQTPLTEGSEDLDGHsDPEESFAR (D) GQT(0.0)PLT(0.0)EGS(0.0)EDLDGHS(0.99)DPEES(0.0)FAR s:Phosphorylated S RETREG3 51794.7 4 5 1136.1 173.56 HUMAN 1 24.7245 12.7424 SEDLDQQSLPSEPEE-p Q8NC44;S344-p SEDLDQQSLPSEPEE 0.718244338748863 0.180554602563136 0.0523333333333333 0.166333333333333 2.71158954133836 9.77906044989149 0.0523333333333333 0.166333333333333 0.535600588916461 0.105218947925073 0.661198375531613 1.94258393582101 Q8NC44 FAM134A Q8NC44.S344.p_FAM134A Q8NC44_S344s _1_1_344_344 Q8NC44 Q8NC44 Reticulophagy regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24448.24448.3 24.14 23.52 3.872 8 1 1 0 1132.5426 3315.6277 S344s TMT10 328 (R) ATTPQLTDVSEDLDQQsLPSEPEETLSR (D) AT(0.0)T(0.0)PQLT(0.0)DVS(0.0)EDLDQQS(0.99)LPS(0.0)EPEET(0.0)LS(0.0)R s:Phosphorylated S RETREG2 58171.3 2 4 1304.1 156.18 HUMAN 1 2.7116 9.7791 SEDNRVPSPPPTGDD-p P50851;S10-p SEDNRVPSPPPTGDD 0.183896650188356 0.523042281118338 -0.241333333333333 -0.064 14.4596917535589 3.78174449785655 -0.241333333333333 -0.064 0.0358121854388431 0.418625375607303 -2.77771672047774 -0.875030641384534 P50851 LRBA P50851.S10.p_LRBA P50851_S10s _1_1_10_10 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20073.20073.4 18.19 13.89 3.73 6 1 1 0 1098.7871 4312.1643 S10s Acetyl 2 (M) ASEDNRVPsPPPTGDDGGGGGREETPTEGGALSLKPGLPIR (G) AS(0.0)EDNRVPS(0.99)PPPT(0.0)GDDGGGGGREET(0.0)PT(0.0)EGGALS(0.0)LKPGLPIR K:TMT10,s:Phosphorylated S LRBA 321783.7 4 1 74.1 649.16 HUMAN 1 -14.4597 -3.7817 SEDPSPASPPLRSSG-p Q9BTK6;S237-p SEDPSPASPPLRSSG 0.766697935852592 0.20308768764784 0.042 0.150333333333333 2.21002717740595 9.10607188360279 0.042 0.150333333333333 0.601169975452612 0.122854993035458 0.554827562258627 1.82606075724517 Q9BTK6 PAGR1 Q9BTK6.S237.p_PAGR1 Q9BTK6_S237s _1_1_237_237 Q9BTK6 Q9BTK6 PAXIP1-associated glutamate-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27172.27172.3 24.22 24.22 3.659 4 1 1 0 751.3618 2172.1022 S237s TMT10 224 (R) DLFSLDSEDPSPAsPPLR (S) DLFS(0.0)LDS(0.0)EDPS(0.0)PAS(0.99)PPLR s:Phosphorylated S PAGR1 27829.6 14 2 2728.1 72.58 HUMAN 1 2.21 9.1061 SEDSNLHYADIQVCS-p Q96A22;Y78-p SEDSNLHYADIQVCS 0.113333020977986 0.0683902820958578 0.364666666666667 0.235333333333333 19.7367225822816 15.4999725750151 0.364666666666667 0.235333333333333 0.0106249707166862 0.0281840072894702 3.82267463526839 2.97073970952933 Q96A22 C11orf52 Q96A22.Y78.p_C11orf52 Q96A22_Y78y _1_1_78_78 Q96A22 Q96A22 Uncharacterized protein C11orf52 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16117.16175.4 38.87 31.23 8.371 5 1 1 0 788.1186 3069.4832 Y78y TMT10 66 (R) SPGLMSEDSNLHyADIQVCSRPHAR (E) S(0.0)PGLMS(0.0)EDS(0.0)NLHY(0.99)ADIQVCS(0.0)RPHAR C:Carbamidomethylation,y:Phosphorylated Y C11orf52 14148.5 15 1 11.1 96.16 HUMAN 1 19.7367 15.5 SEDTTSGSPPKKSSA-p Q9BZZ5;S464-p SEDTTSGSPPKKSSA 0.97076436181379 0.428280255264028 0.00633333333333333 0.0996666666666667 0.254345381429621 4.90322481956223 0.00633333333333333 0.0996666666666667 0.943116758146662 0.323353464189105 0.0747269810657629 1.08607742825943 Q9BZZ5 API5 Q9BZZ5.S464.p_API5 Q9BZZ5_S464s _1_1_464_464 Q9BZZ5 Q9BZZ5|Q9BZZ5-6|G3V1C3 Apoptosis inhibitor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6422.6422.3 15.25 11.36 2.04 5 1 1 0 691.3683 1992.1216 S464s TMT10 456 (R) ASEDTTSGsPPKK (S) AS(0.0)EDT(0.0)T(0.0)S(0.0)GS(0.99)PPKK K:TMT10,s:Phosphorylated S API5 59345.8 4 3 2573.1 78.1 HUMAN 1 0.2543 4.9032 SEDVKRHSSASFENV-p P35568;S1142-p SEDVKRHSSASFENV 0.490269854004561 0.0534293002302108 0.137 0.249666666666667 5.70533438374452 16.9646466291577 0.137 0.249666666666667 0.268823085556111 0.0201157086631158 1.23188823750131 3.25320242806838 P35568 IRS1 P35568.S1142.p_IRS1 P35568_S1142s _1_1_1142_1142 P35568 P35568 Insulin receptor substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18726.18726.4 16.44 16.44 1.198 3 1 1 0 734.1351 2853.5524 S1142s TMT10 1140 (K) RHsSASFENVWLRPGELGGAPK (E) RHS(0.99)S(0.0)AS(0.0)FENVWLRPGELGGAPK K:TMT10,s:Phosphorylated S IRS1 132786.8 3 20 229.1 423.14 HUMAN 1 5.7053 16.9646 SEEDDASSLTADNLE-p Q9UPN4-2;S496-p SEEDDASSLTADNLE 0.284643143205623 0.182667560824705 0.155666666666667 -0.175 10.2963241607229 9.71243417830054 0.155666666666667 -0.175 0.0934044535336027 0.10684558522582 2.03324240124948 -1.93103517478108 Q9UPN4 CEP131 Q9UPN4.2.S496.p_CEP131 Q9UPN4-2_S496s _1_1_496_496 Q9UPN4-2 Q9UPN4-2|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23276.23276.2 19.22 19.22 1.183 5 1 1 0 1377.1433 2673.2932 S496s TMT10 485 (R) YAWASEEDDASsLTADNLEK (F) Y(0.0)AWAS(0.0)EEDDAS(0.0)S(0.99)LT(0.0)ADNLEK K:TMT10,s:Phosphorylated S CEP131 122301.7 4 16 359.1 345.98 HUMAN 1 10.2963 -9.7124 SEEDPLLSPVETWKG-p Q13017;S1202-p SEEDPLLSPVETWKG 0.492994289859056 0.127079279755815 -0.0953333333333333 -0.193666666666667 5.65550122630388 11.8096866985423 -0.0953333333333334 -0.193666666666667 0.271925463440143 0.0659221449979703 -1.22294173944219 -2.29749811167996 Q13017 ARHGAP5 Q13017.S1202.p_ARHGAP5 Q13017_S1202s _1_1_1202_1202 Q13017 Q13017|Q13017-2|A0A0A0MSK6 Rho GTPase-activating protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27526.27526.3 15.38 15.38 5.07 3 1 1 0 742.3771 2145.148 S1202s TMT10 1194 (R) GSEEDPLLsPVETWK (G) GS(0.0)EEDPLLS(0.99)PVET(0.0)WK K:TMT10,s:Phosphorylated S ARHGAP5 173940.2 3 11 639.1 255.25 HUMAN 1 -5.6555 -11.8097 SEEEEEDSDEEEVEL-p O75607;S158-p SEEEEEDSDEEEVEL 0.295408715152096 0.824898780665274 -0.21 -0.0226666666666666 9.970772942551 1.17077378272499 -0.21 -0.0226666666666666 0.100675247452406 0.763699703035861 -1.97663315121787 -0.316151303938658 O75607 NPM3 O75607.S158.p_NPM3 O75607_S147sS151sS158s_3_3_147_158 O75607 O75607 Nucleoplasmin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27305.27305.4 30.22 30.22 3.312 5 3 3 0 1308.3237 4990.38 S147s S151s S158s TMT10 137 (R) HQIVTMSNDVsEEEsEEEEEDsDEEEVELCPILPAKK (Q) HQIVT(0.0)MS(0.0)NDVS(0.99)EEES(0.99)EEEEEDS(0.99)DEEEVELCPILPAKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NPM3 19628.6 8 3 2964.1 64.53 HUMAN 1 -9.9708 -1.1708 SEEEKANSDDERPVA-p Q8WVC0;S212-p SEEEKANSDDERPVA 0.0930004911854097 0.00319836444136788 -1.34433333333333 2.16033333333333 21.9395917653735 37.432279013347 -1.34433333333333 2.16033333333333 0.00639794973061504 0.000180622603809406 -4.30812913429811 9.03429192135935 Q8WVC0 LEO1 Q8WVC0.S212.p_LEO1 Q8WVC0_S212s _1_1_212_212 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6266.6266.3 14.48 14.48 5.714 2 1 1 0 805.6974 2335.105 S212s TMT10 210 (K) ANsDDERPVASDNDDEK (Q) ANS(0.99)DDERPVAS(0.0)DNDDEK K:TMT10,s:Phosphorylated S LEO1 75516.9 1 5 514.1 286.88 HUMAN 1 -21.9396 37.4323 SEEELEHSQDTDADD-p Q9UKM9-2;S279-p SEEELEHSQDTDADD 0.739902386885637 0.0172398563484147 0.057 0.358 2.48050426028439 24.3298553036175 0.057 0.358 0.564871383663065 0.00368989892213145 0.612766748520109 4.87016035111968 Q9UKM9 RALY Q9UKM9.2.S279.p_RALY Q9UKM9-2_S279s _1_1_279_279 Q9UKM9-2 Q9UKM9|Q9UKM9-2 Isoform 1 of RNA-binding protein Raly HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16774.16992.4 21.62 21.62 1.105 5 1 1 0 959.905 3756.643 S279s TMT10 259 (R) TRDDGDEEGLLTHSEEELEHsQDTDADDGALQ (-) T(0.0)RDDGDEEGLLT(0.0)HS(0.0)EEELEHS(0.99)QDT(0.0)DADDGALQ s:Phosphorylated S RALY 30420.5 5 13 967.1 193.88 HUMAN 1 2.4805 24.3299 SEEELNKSFNLEASL-p C9JJN9;S26-p SEEELNKSFNLEASL 0.210578226562875 0.00254880172900523 -0.234333333333333 -0.724666666666667 13.0607370733882 39.6434627056285 -0.234333333333333 -0.724666666666667 0.0494226800971217 0.000108555974276109 -2.52201720060165 -9.9721438575511 C9JJN9 NotFound C9JJN9.S26.p_NotFound C9JJN9_S26s _1_1_26_26 C9JJN9 Q8N3P4|C9JJN9|Q8N3P4-3|Q8N3P4-2|C9JP71 Vacuolar protein sorting-associated protein 8 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22732.22732.3 16.86 16.86 3.443 5 1 1 0 931.8226 2713.4863 S26s TMT10 18 (K) TSEEELNKsFNLEASLSK (F) T(0.0)S(0.0)EEELNKS(0.99)FNLEAS(0.0)LS(0.0)K K:TMT10,s:Phosphorylated S VPS8 163852.7 4 2 2244.1 91.97 HUMAN 1 -13.0607 -39.6435 SEEESNLSNDFIDEN-p Q12830;S1684-p SEEESNLSNDFIDEN 0.427853715175935 0.363227998769371 0.111666666666667 -0.112666666666667 6.78902676367398 5.83113184100954 0.111666666666667 -0.112666666666667 0.209458179054797 0.261148067199619 1.42403054254505 -1.25413156850695 Q12830 BPTF Q12830.S1684.p_BPTF Q12830_S1684s _1_1_1684_1684 Q12830 Q12830|Q12830-2|Q12830-4 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22549.22549.5 26.66 20.82 2.285 8 1 1 0 1029.9211 5065.6259 S1684s TMT10 1669 (K) KVTSSPITSEEESNLsNDFIDENGLPINKNENVNGESK (R) KVT(0.0)S(0.0)S(0.0)PIT(0.0)S(0.0)EEES(0.0)NLS(0.99)NDFIDENGLPINKNENVNGES(0.0)K K:TMT10,s:Phosphorylated S BPTF 340995.1 3 19 94.1 610.41 HUMAN 1 6.789 -5.8311 SEEKEDHSDGLAGLK-p Q6P0Q8;S883-p SEEKEDHSDGLAGLK 0.115120255396574 0.968509550199507 -0.419666666666667 -0.00433333333333332 19.5470994399755 0.197185532251667 -0.419666666666667 -0.00433333333333332 0.0110991585685092 0.955611674463361 -3.78242013097598 -0.0582820487721769 Q6P0Q8 MAST2 Q6P0Q8.S883.p_MAST2 Q6P0Q8_S883s _1_1_883_883 Q6P0Q8 Q6P0Q8|Q6P0Q8-2|E7ERL6 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12719.12719.4 11.13 8.34 1.201 3 1 1 0 685.3636 2658.4666 S883s TMT10 873 (K) RSLSEEKEDHsDGLAGLK (G) RS(0.0)LS(0.0)EEKEDHS(0.99)DGLAGLK K:TMT10,s:Phosphorylated S MAST2 197687.5 2 50 121.1 549.41 HUMAN 1 -19.5471 -0.1972 SEEKISDSEGFKANL-p P23246;S275-p SEEKISDSEGFKANL 0.518987067569368 0.334268531645526 -0.128666666666667 0.0946666666666667 5.26037946430117 6.30659319210843 -0.128666666666667 0.0946666666666667 0.297825619326994 0.234067265115803 -1.15156708078782 1.33866832569951 P23246 SFPQ P23246.S275.p_SFPQ P23246_S275s _1_1_275_275 P23246 P23246|P23246-2 Splicing factor, proline- and glutamine-rich HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15384.15384.2 10.04 4.09 1.26 2 1 1 0 710.86 1340.7462 S275s TMT10 272 (K) ISDsEGFK (A) IS(0.0)DS(0.99)EGFK K:TMT10,s:Phosphorylated S SFPQ 76262.2 2 4 1659.1 123.09 HUMAN 1 -5.2604 6.3066 SEEKKRISSKSPGHM-p Q9NWH9;S550-p SEEKKRISSKSPGHM 0.213504219163969 0.157866320995109 -0.304666666666667 0.151333333333333 12.9292576495667 10.5459661918354 -0.304666666666667 0.151333333333333 0.050941793969965 0.0881867587796972 -2.49832731106483 2.07585235430883 Q9NWH9 SLTM Q9NWH9.S550.p_SLTM Q9NWH9_S550sS551s_2_2_550_551 Q9NWH9 Q9NWH9|Q9NWH9-3 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16498.16498.2 10.61 10.61 1.204 4 2 2 0 1180.0961 2199.2571 S550s S551s Hydrogen 549 (R) IssKSPGHMVILDQTK (G) IS(0.99)S(0.99)KS(0.0)PGHMVILDQT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S SLTM 117431.6 29 23 167.1 494.15 HUMAN 1 -12.9293 10.546 SEEPEGRSYSTLTTV-p Q96NY8;S444-p SEEPEGRSYSTLTTV 0.791634956034985 0.135548726112461 -0.061 -0.273666666666667 1.9587428510337 11.4388009034298 -0.061 -0.274782235684066 0.636979880309714 0.0717992503208372 -0.499645839663882 -2.23211721491913 Q96NY8 PVRL4 Q96NY8.S444.p_PVRL4 Q96NY8_S444s _1_1_444_444 Q96NY8 Q96NY8|Q96NY8-2 Nectin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13223.13223.2 10.55 3.68 3.156 6 1 1 0 668.8388 1256.7048 S444s TMT10 444 (R) sYSTLTTVR (E) S(0.99)Y(0.0)S(0.0)T(0.0)LT(0.0)T(0.0)VR s:Phosphorylated S NECTIN4 55966.8 1 5 1903.1 108.23 HUMAN 1 -1.9587 -11.4388 SEEPTGFSVDSNLLG-p Q96PE2;S754-p SEEPTGFSVDSNLLG 0.361204552200767 0.0444107133605986 0.135 0.282333333333333 8.21909000030112 18.1078200290029 0.135 0.282333333333333 0.150692278643679 0.0154603028532776 1.67314698479504 3.48124736684288 Q96PE2 ARHGEF17 Q96PE2.S754.p_ARHGEF17 Q96PE2_S754s _1_1_754_754 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30322.30322.3 16.98 14.97 1.127 7 1 1 0 949.1511 2765.4609 S754s TMT10 744 (R) AATSEEPTGFsVDSNLLGSLSPK (T) AAT(0.0)S(0.0)EEPT(0.0)GFS(0.99)VDS(0.0)NLLGS(0.0)LS(0.0)PK K:TMT10,s:Phosphorylated S ARHGEF17 223779.6 3 25 30.1 908.19 HUMAN 1 8.2191 18.1078 SEEQSEASSEQLDQF-p Q9Y6X4;S618-p SEEQSEASSEQLDQF 0.940646984077448 0.00436830434740437 0.0135 0.553833333333333 0.522302552846381 34.6765322205697 0.0135 0.553833333333333 0.886685782211553 0.00034068010932772 0.149350318293213 7.97588973759668 Q9Y6X4 FAM169A Q9Y6X4.S618.p_FAM169A Q9Y6X4_S618sS619s_2_2_618_619 Q9Y6X4 Q9Y6X4|D6RB01 Soluble lamin-associated protein of 75 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19000.19676.3 20.52 20.52 1.131 6 2 2 0 1073.4653 3058.4489 S618s S619s TMT10 609 (K) NQSEEQSEAssEQLDQFTQSAEK (A) NQS(0.0)EEQS(0.0)EAS(0.99)S(0.99)EQLDQFT(0.0)QS(0.0)AEK K:TMT10,s:Phosphorylated S FAM169A 75295.8 3 16 731.1 236 HUMAN 2 0.5223 34.6765 SEERRTKSWGEQCPE-p P27987;S204-p SEERRTKSWGEQCPE 0.148266672319898 0.0761209066341781 -0.241666666666667 -0.26 16.7898265299791 14.8444632279328 -0.241666666666667 -0.26 0.0209419610254724 0.032775828402486 -3.22135315727376 -2.84749618484825 P27987 ITPKB P27987.S204.p_ITPKB P27987_S204s _1_1_204_204 P27987 P27987|P27987-2 Inositol-trisphosphate 3-kinase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9512.9512.4 19.18 19.18 18.718 5 1 1 0 605.7803 2340.129 S204s TMT10 204 (K) sWGEQCPETSGTDSGRK (G) S(0.99)WGEQCPET(0.0)S(0.0)GT(0.0)DS(0.0)GRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ITPKB 103230.2 8 7 424.1 319.61 HUMAN 1 -16.7898 -14.8445 SEERSGDSDQTDEDG-p Q9BV36;S162-p SEERSGDSDQTDEDG 0.361753568197081 0.0263297759478762 0.143333333333333 0.331 8.20425014238673 21.4664083855768 0.143333333333333 0.331 0.151208075434376 0.00713442803265312 1.67057516038441 4.19666574239226 Q9BV36 MLPH Q9BV36.S162.p_MLPH Q9BV36_S162sT165t_2_2_162_165 Q9BV36 Q9BV36|Q9BV36-2|Q9BV36-4|Q9BV36-5 Melanophilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14369.14369.4 17.22 17.52 1.102 5 2 2 0 929.1655 3553.7134 S162s T165t TMT10 159 (R) SGDsDQtDEDGEPGSEAQAQAQPFGSKK (K) S(0.0)GDS(0.99)DQT(0.99)DEDGEPGS(0.0)EAQAQAQPFGS(0.0)KK K:TMT10,s:Phosphorylated S,t:Phosphorylated T MLPH 66632.6 7 11 496.1 293.1 HUMAN 1 8.2043 21.4664 SEESRPYTNKVITLW-p Q9NYV4-2;T893-p SEESRPYTNKVITLW 0.310969346790867 0.0191434561000209 -0.271333333333333 0.393666666666667 9.48453254979399 23.6239854281736 -0.271333333333333 0.393666666666667 0.112602166102452 0.00434111666274143 -1.89227767434652 4.69805823417844 Q9NYV4 CDK12 Q9NYV4.2.T893.p_CDK12 Q9NYV4-2_T893t _1_1_893_893 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10341.10547.3 14.12 14.12 1.879 5 1 1 0 713.6891 2059.086 T893t TMT10 883 (R) LYNSEESRPYtNK (V) LY(0.0)NS(0.0)EES(0.0)RPY(0.0)T(0.99)NK K:TMT10,t:Phosphorylated T CDK12 163853.1 5 27 59.1 708.76 HUMAN 1 -9.4845 23.624 SEEWPDWSEPEEPEN-p Q8IZE3-2;S479-p SEEWPDWSEPEEPEN 0.530039241124765 0.501467984039475 0.089 0.098 5.10167769799843 4.01259140907534 0.089 0.098 0.308910186883882 0.396954618353442 1.12265884623904 0.919379619935671 Q8IZE3 SCYL3 Q8IZE3.2.S479.p_SCYL3 Q8IZE3-2_S479s _1_1_479_479 Q8IZE3-2 Q8IZE3|Q8IZE3-2 Isoform 2 of Protein-associating with the carboxyl-terminal domain of ezrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28237.28237.4 24.76 24.76 5.842 3 1 1 0 941.2037 3681.8226 S479s TMT10 471 (K) KSEEWPDWsEPEEPENQTVNIQIWPR (E) KS(0.0)EEWPDWS(0.99)EPEEPENQT(0.0)VNIQIWPR K:TMT10,s:Phosphorylated S SCYL3 77470.8 12 2 1163.1 171.02 HUMAN 1 5.1017 4.0126 SEFKEAFSLFDKDGD-p E7EMB3;S65-p SEFKEAFSLFDKDGD 0.175566091093158 0.0453272697780073 -0.295333333333333 0.363333333333333 15.024570524033 17.9813661561812 -0.295333333333333 0.363333333333333 0.03144437359854 0.0159170794617681 -2.88306066610252 3.45566977154632 E7EMB3 NotFound E7EMB3.S65.p_NotFound E7EMB3_S65s _1_1_65_65 E7EMB3 E7EMB3|E7ETZ0 Calmodulin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25350.25350.3 13.97 13.97 2.985 4 1 1 0 871.4525 2532.38 S65s TMT10 62 (K) EAFsLFDKDGDGTITTK (E) EAFS(0.99)LFDKDGDGT(0.0)IT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S CALM2 21860.1 1 1 2687.1 73.97 HUMAN 1 -15.0246 17.9814 SEFQELDSPDDTMGT-p Q12851;S394-p SEFQELDSPDDTMGT 0.912301904467893 0.187178585400915 0.017 0.138333333333333 0.776959820556812 9.57140336340118 0.017 0.138333333333333 0.836188167847632 0.110372190958657 0.216955729892693 1.90660077005993 Q12851 MAP4K2 Q12851.S394.p_MAP4K2 Q12851_S394s _1_1_394_394 Q12851 Q12851|Q12851-2 Mitogen-activated protein kinase kinase kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23007.23007.2 21.91 21.91 4.428 5 1 1 0 1305.1082 2529.2431 S394s TMT10 385 (R) SASEFQELDsPDDTMGTIK (R) S(0.0)AS(0.0)EFQELDS(0.99)PDDT(0.0)MGT(0.0)IK K:TMT10,s:Phosphorylated S MAP4K2 92524.2 4 4 1581.1 129.87 HUMAN 1 0.777 9.5714 SEGAGRRSPARPATE-p Q9BR39;S534-p SEGAGRRSPARPATE 0.948846569796209 0.714446889516852 -0.0463333333333333 -0.148 0.451994529406259 2.0110643782795 -0.0463333333333333 -0.148 0.901157179482315 0.629351921028891 -0.13013941033934 -0.517930522729973 Q9BR39 JPH2 Q9BR39.S534.p_JPH2 Q9BR39_S534s _1_1_534_534 Q9BR39 Q9BR39 Junctophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3221.3221.5 12.39 12.39 1.32 5 1 1 0 479.0473 2311.2428 S534s TMT10 523 (R) SVTPSEGAGRRsPARPATER (M) S(0.0)VT(0.0)PS(0.0)EGAGRRS(0.99)PARPAT(0.0)ER s:Phosphorylated S JPH2 74448.4 1 8 1028.1 186.58 HUMAN 1 -0.452 -2.0111 SEGGADDSAEEGDLL-p B4DY08;S247-p SEGGADDSAEEGDLL 0.804537435558644 0.0258110240510366 -0.0493333333333333 0.423666666666667 1.82080062821895 21.5990974143535 -0.0493333333333334 0.423666666666667 0.657536608347509 0.00691974767725572 -0.46874089548274 4.2264855363958 B4DY08 NotFound B4DY08.S247.p_NotFound B4DY08_S247s _1_1_247_247 B4DY08 B4DY08 Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15222.15222.5 26.21 26.21 7.569 3 1 1 0 1031.2729 5072.3692 S247s TMT10 231 (K) KDETNVKMESEGGADDsAEEGDLLDDDDNEDRGDDQVK (T) KDET(0.0)NVKMES(0.0)EGGADDS(0.99)AEEGDLLDDDDNEDRGDDQVK K:TMT10,s:Phosphorylated S HNRNPC 32085.2 9 1 261.4 397.39 HUMAN 1 -1.8208 21.5991 SEGGRKSSLLQKSKA-p Q9BT25;S70-p SEGGRKSSLLQKSKA 0.407981403554209 0.121368762951153 -0.121333333333333 -0.249 7.18379800721758 12.0764265304293 -0.121333333333333 -0.249 0.19125825950573 0.0619950974431917 -1.49314928508267 -2.34471918188959 Q9BT25 HAUS8 Q9BT25.S70.p_HAUS8 Q9BT25_S70s _1_1_70_70 Q9BT25 Q9BT25 HAUS augmin-like complex subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12733.12733.3 8.01 8.01 1.363 2 1 1 0 524.3231 1490.9873 S70s TMT10 68 (R) KSsLLQK (S) KS(0.0)S(0.99)LLQK K:TMT10,s:Phosphorylated S HAUS8 44970.7 1 1 5092.1 23.09 HUMAN 1 -7.1838 -12.0764 SEGIFLGSESDEDSV-p Q9BYW2;S321-p SEGIFLGSESDEDSV 0.30880050022541 0.0136427353644521 0.161666666666667 0.386333333333333 9.53900090477406 25.9185033507399 0.161666666666667 0.386333333333333 0.111198751078303 0.00255946776906863 1.90171800410124 5.27333135700815 Q9BYW2 SETD2 Q9BYW2.S321.p_SETD2 Q9BYW2_S321s _1_1_321_321 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15090.15090.3 21.35 21.35 1.101 6 1 1 0 899.1014 2615.3201 S321s TMT10 310 (K) KSSQSEGIFLGsESDEDSVR (T) KS(0.0)S(0.0)QS(0.0)EGIFLGS(0.99)ES(0.0)DEDS(0.0)VR K:TMT10,s:Phosphorylated S SETD2 290615.4 6 2 58.1 711.11 HUMAN 1 9.539 25.9185 SEGKGSDSDSEGDNP-p Q9UN37;S97-p SEGKGSDSDSEGDNP 0.214718677142886 0.769477678187172 -0.339333333333333 0.0313333333333334 12.879180818534 1.57300108990046 -0.339333333333333 0.0313333333333334 0.0515325837979846 0.69614529302555 -2.48931857787956 0.411972407090821 Q9UN37 VPS4A Q9UN37.S97.p_VPS4A Q9UN37_S97s _1_1_97_97 Q9UN37 Q9UN37 Vacuolar protein sorting-associated protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5771.5771.2 13.2 13.2 1.262 3 1 1 0 937.9078 1794.8394 S97s TMT10 94 (K) GSDsDSEGDNPEK (K) GS(0.0)DS(0.99)DS(0.0)EGDNPEK K:TMT10,s:Phosphorylated S VPS4A 49182.3 10 1 1671.1 122.19 HUMAN 1 -12.8792 1.573 SEGKTSPSPIRIEEE-p Q8WYB5;S1303-p SEGKTSPSPIRIEEE 0.281655667968343 0.00434479659787257 -0.372333333333333 0.817 10.402034812196 34.7092464116223 -0.372333333333333 0.817 0.091158363243083 0.000338123502352229 -2.05165249361355 7.98778799657452 Q8WYB5 KAT6B Q8WYB5.S1303.p_KAT6B Q8WYB5_S1303s _1_1_1303_1303 Q8WYB5 Q8WYB5 Histone acetyltransferase KAT6B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17223.17223.3 11.35 11.35 1.192 3 1 1 0 675.033 1943.1214 S1303s TMT10 1300 (K) TSPsPIRIEEEVK (E) T(0.0)S(0.0)PS(0.99)PIRIEEEVK K:TMT10,s:Phosphorylated S KAT6B 234283.8 1 5 903.2 203.52 HUMAN 1 -10.402 34.7092 SEGLLGWSQKDLQSE-p Q9C0C2;S724-p SEGLLGWSQKDLQSE 0.0474835790496334 0.125851360418095 -0.667333333333333 -0.216666666666667 29.4007033670079 11.8700102751371 -0.667333333333334 -0.216666666666667 0.00114796768591199 0.0650128152178539 -6.25183832651184 -2.30816204151363 Q9C0C2 TNKS1BP1 Q9C0C2.S724.p_TNKS1BP1 Q9C0C2_S724s _1_1_724_724 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18355.18355.4 22.59 16.05 22.586 6 1 1 0 883.4558 3450.8254 S724s TMT10 701 (R) RGAGAELKDTQSPSTCSEGLLGWsQK (D) RGAGAELKDT(0.0)QS(0.0)PS(0.0)T(0.0)CS(0.0)EGLLGWS(0.99)QK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TNKS1BP1 182819.3 3 25 4.1 2105.7 HUMAN 1 -29.4007 -11.87 SEGPPRMSPKAQRHP-p Q99700;S624-p SEGPPRMSPKAQRHP 0.10854647135141 0.164537842503167 0.698 -0.284 20.2131386743094 10.3045644159707 0.698 -0.284 0.00952107820838544 0.0932273969869082 3.9248422599124 -2.0338260943008 Q99700 ATXN2 Q99700.S624.p_ATXN2 Q99700_S624s _1_1_624_624 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10809.10809.3 13.16 10.04 5.29 3 1 1 0 614.64 1761.9392 S624s TMT10 615 (R) MSSEGPPRMsPK (A) MS(0.0)S(0.0)EGPPRMS(0.99)PK K:TMT10,s:Phosphorylated S ATXN2 140907.9 13 8 176.1 481.52 HUMAN 1 20.2131 -10.3046 SEGYFSQSQEEEFAQ-p Q16643-3;S647-p SEGYFSQSQEEEFAQ 0.417803412052618 0.910622602799234 -0.118666666666667 -0.013 6.99611311868603 0.569588509341054 -0.118666666666667 -0.013 0.199704884913799 0.877083920229118 -1.46033281727865 -0.1621171463685 Q16643 DBN1 Q16643.3.S647.p_DBN1 Q16643-3_S647s _1_1_647_647 Q16643-3 Q16643-3|Q16643-2 Isoform 3 of Drebrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22411.23134.3 24.51 24.51 2.939 6 1 1 0 1203.1951 3527.6161 S647s TMT10 635 (K) EGTQASEGYFSQsQEEEFAQSEELCAK (A) EGT(0.0)QAS(0.0)EGY(0.0)FS(0.0)QS(0.99)QEEEFAQS(0.0)EELCAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DBN1 76925.9 6 8 1729.1 119.21 HUMAN 1 -6.9961 -0.5696 SEHLEPITPTKNNKV-p O00267;T1034-p SEHLEPITPTKNNKV 0.147571881565505 0.0802529084845163 0.248 0.223 16.8710010642049 14.5368160255549 0.248 0.223 0.0205541676051268 0.0351818277071828 3.23727034008389 2.7902713744473 O00267 SUPT5H O00267.T1034.p_SUPT5H O00267_T1034t _1_1_1034_1034 O00267 O00267 Transcription elongation factor SPT5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19908.19908.4 20.39 20.39 4.01 5 1 1 0 569.5639 2195.2688 T1034t TMT10 1022 (K) VVSISSEHLEPItPTK (N) VVS(0.0)IS(0.0)S(0.0)EHLEPIT(0.99)PT(0.0)K K:TMT10,t:Phosphorylated T SUPT5H 121396.8 2 6 1946.1 105.81 HUMAN 1 16.871 14.5368 SEHLSELTEEEYEAH-p Q9Y2E8-2;T526-p SEHLSELTEEEYEAH 0.832987870919974 0.0235819629746551 0.039 0.362 1.53104702385794 22.1916253046128 0.039 0.362 0.702902839313671 0.00603722649798037 0.402248637739137 4.3612234755506 Q9Y2E8 SLC9A8 Q9Y2E8.2.T526.p_SLC9A8 Q9Y2E8-2_S519sS523sT526t_3_3_519_526 Q9Y2E8-2 Q9Y2E8-2 Isoform 2 of Sodium/hydrogen exchanger 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22324.22324.4 12.39 12.39 1.201 6 3 3 0 834.5928 3095.4465 S519s S523s T526t TMT10 513 (K) MGNTVEsEHLsELtEEEYEAHYIR (R) MGNT(0.0)VES(0.99)EHLS(0.99)ELT(0.99)EEEY(0.0)EAHY(0.0)IR s:Phosphorylated S,t:Phosphorylated T SLC9A8 67673.2 1 2 4249.1 34.7 HUMAN 1 1.531 22.1916 SEHRTQVSLKDQITS-p O96017-9;S478-p SEHRTQVSLKDQITS 0.495458193368512 0.00221937322358509 -0.152 1.10233333333333 5.61637475548808 41.1687191984932 -0.152 1.10233333333333 0.274386363829125 7.64061083768834e-05 -1.21590918522557 10.6697332036053 O96017 CHEK2 O96017.9.S478.p_CHEK2 O96017-9_S478s _1_1_478_478 O96017-9 O96017-9|O96017-12 Isoform 9 of Serine/threonine-protein kinase Chk2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16655.16655.3 13.66 13.66 2.136 4 1 1 0 724.7471 2092.2581 S478s TMT10 475 (R) TQVsLKDQITSGK (Y) T(0.0)QVS(0.99)LKDQIT(0.0)S(0.0)GK K:TMT10,s:Phosphorylated S CHEK2 66216.4 1 7 745.1 233.29 HUMAN 1 -5.6164 41.1687 SEIALLQSRLKTEGS-p P04843;S535-p SEIALLQSRLKTEGS 0.298588809863832 0.746799966728225 0.204666666666667 -0.0406666666666666 9.86585973712274 1.75012156113806 0.204666666666667 -0.0406666666666666 0.103136888759973 0.668325210559064 1.95841486460878 -0.452674708159311 P04843 RPN1 P04843.S535.p_RPN1 P04843_S535s _1_1_535_535 P04843 P04843|B7Z4L4 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24777.24777.3 14.89 14.89 9.322 3 1 1 0 537.6295 1530.9053 S535s TMT10 525 (K) ALTSEIALLQsR (L) ALT(0.0)S(0.0)EIALLQS(0.99)R s:Phosphorylated S RPN1 68682.2 2 4 3998.1 39.38 HUMAN 1 9.8659 -1.7501 SEIEPKNSPEDLGLS-p Q12888-2;S505-p SEIEPKNSPEDLGLS 0.302699451769611 0.0485424938312482 0.143333333333333 0.279666666666667 9.72407917894875 17.5709572130253 0.143333333333333 0.279666666666667 0.106559477445527 0.0174946105363773 1.93381094461831 3.37327077692027 Q12888 TP53BP1 Q12888.2.S505.p_TP53BP1 Q12888-2_S505s _1_1_505_505 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21664.22075.3 21.15 18.53 3.558 6 1 1 0 1082.2138 3164.66 S505s TMT10 497 (K) TSEIEPKNsPEDLGLSLTGDSCK (L) T(0.0)S(0.0)EIEPKNS(0.99)PEDLGLS(0.0)LT(0.0)GDS(0.0)CK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TP53BP1 216167.2 20 20 3.1 2297.07 HUMAN 1 9.7241 17.571 SEIISFKSMEDLVNE-p Q99689;S58-p SEIISFKSMEDLVNE 0.983028189885502 0.0157790503450447 0.00633333333333331 1.01333333333333 0.146315880344255 24.9086631116858 0.00633333333333333 1.01333333333333 0.966870727543426 0.00322948810174914 0.0434899219972885 5.01445220143443 Q99689 FEZ1 Q99689.S58.p_FEZ1 Q99689_S58s _1_1_58_58 Q99689 Q99689|Q99689-2 Fasciculation and elongation protein zeta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28191.28191.3 12.19 12.19 99 1 1 1 0 665.3129 1913.9567 S58s TMT10 58 (K) sMEDLVNEFDEK (L) S(1.0)MEDLVNEFDEK K:TMT10,s:Phosphorylated S FEZ1 45403.2 1 1 4925.1 25.01 HUMAN 1 0.1463 24.9087 SEITRTISINSPKAQ-p Q9P1Y6;S864-p SEITRTISINSPKAQ 0.869521280017076 0.0970151084556389 0.0356666666666667 0.216333333333333 1.18623537372859 13.3989646319901 0.0356666666666667 0.216333333333333 0.760985641806228 0.0457197173478569 0.319962606619927 2.5817441100608 Q9P1Y6 PHRF1 Q9P1Y6.S864.p_PHRF1 Q9P1Y6_S864s _1_1_864_864 Q9P1Y6 Q9P1Y6|Q9P1Y6-3|A0A0J9YWD5|A0A0J9YYB5|F8WEF5|B7ZM65 PHD and RING finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14815.14815.2 11.74 11.74 3.195 3 1 1 0 699.3946 1317.8142 S864s TMT10 862 (R) TIsINSPK (A) T(0.0)IS(0.99)INS(0.0)PK K:TMT10,s:Phosphorylated S PHRF1 180374.6 1 8 438.1 312.23 HUMAN 1 1.1862 13.399 SEKESEKSDGDPIVD-p Q8TAQ2;S813-p SEKESEKSDGDPIVD 0.1560557092084 0.00238856624082869 -0.388666666666667 0.769 16.1944690026842 40.2369042944264 -0.388666666666667 0.769 0.0240188992096854 9.46911891539773e-05 -3.10561995954146 10.2384357800303 Q8TAQ2 SMARCC2 Q8TAQ2.S813.p_SMARCC2 Q8TAQ2_S806sS810sS813s_3_3_806_813 Q8TAQ2 Q8TAQ2|Q8TAQ2-3|Q8TAQ2-2 SWI/SNF complex subunit SMARCC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14875.14875.5 8.3 7.5 99 3 3 3 0 772.9758 3620.9516 S806s S810s S813s TMT10 801 (K) GKEGDsEKEsEKsDGDPIVDPEK (E) GKEGDS(1.0)EKES(1.0)EKS(1.0)DGDPIVDPEK K:TMT10,s:Phosphorylated S SMARCC2 133276.4 2 16 499.1 292.05 HUMAN 1 -16.1945 40.2369 SEKGAHPSGGADDVA-p Q07065;S26-p SEKGAHPSGGADDVA 0.131539706649705 0.00690102088025228 -0.610666666666667 -0.496666666666667 18.1958596621497 30.9887248639551 -0.610666666666667 -0.496666666666667 0.0151500488709338 0.000796393145821282 -3.50201248037793 -6.72754856960924 Q07065 CKAP4 Q07065.S26.p_CKAP4 Q07065_S26s _1_1_26_26 Q07065 Q07065 Cytoskeleton-associated protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5957.5957.3 14.35 10.73 99 1 1 1 0 573.9539 1639.8804 S26s TMT10 22 (K) GAHPsGGADDVAK (K) GAHPS(1.0)GGADDVAK K:TMT10,s:Phosphorylated S CKAP4 66135.4 1 2 4654.1 28.31 HUMAN 1 -18.1959 -30.9887 SEKIDENSDKEMEVE-p Q8N3X1-2;S501-p SEKIDENSDKEMEVE 0.79813572883131 0.00165401543705715 -0.0403333333333333 0.873333333333333 1.89062942703331 44.211800272418 -0.0403333333333333 0.873333333333334 0.647048831563458 3.7915778086017e-05 -0.484442564774547 12.1982382436061 Q8N3X1 FNBP4 Q8N3X1.2.S501.p_FNBP4 Q8N3X1-2_S501s _1_1_501_501 Q8N3X1-2 Q8N3X1-2 Isoform 2 of Formin-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14872.14872.4 16.12 14.36 7.617 2 1 1 0 694.5879 2695.3587 S501s TMT10 497 (K) IDENsDKEMEVEESPEK (I) IDENS(0.99)DKEMEVEES(0.0)PEK K:TMT10,s:Phosphorylated S FNBP4 110905.5 1 11 405.1 325.34 HUMAN 1 -1.8906 44.2118 SEKKVSPTEIVLESF-p Q14207;T1153-p SEKKVSPTEIVLESF 0.93931869762336 0.0511642402924895 -0.0136666666666667 -0.292666666666667 0.531266095490555 17.2360550178108 -0.0136666666666667 -0.292666666666667 0.884857610340861 0.0188970711486729 -0.151781693686222 -3.30670987682337 Q14207 NPAT Q14207.T1153.p_NPAT Q14207_T1153t _1_1_1153_1153 Q14207 Q14207 Protein NPAT HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26032.26032.4 11.3 11.3 1.182 3 1 1 0 596.0933 2301.3785 T1153t TMT10 1149 (K) KVSPtEIVLESFHK (A) KVS(0.0)PT(0.99)EIVLES(0.0)FHK K:TMT10,t:Phosphorylated T NPAT 155599.6 1 6 1274.1 159.34 HUMAN 1 -0.5313 -17.2361 SEKLNLDSIIGRLLE-p P62136;S11-p SEKLNLDSIIGRLLE 0.73762669844845 0.0173615564197841 -0.0843333333333333 0.464 2.50525930532654 24.2741981496334 -0.0843333333333334 0.464 0.561660742131666 0.00373749125385804 -0.618000080308127 4.85643784655347 P62136 PPP1CA P62136.S11.p_PPP1CA P62136_S11s _1_1_11_11 P62136 P62136-2|P62136-3 Serine/threonine-protein phosphatase PP1-alpha catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27962.27962.2 10.72 6.92 99 1 1 1 0 655.3585 1229.7415 S11s TMT10 7 (K) LNLDsIIGR (L) LNLDS(1.0)IIGR s:Phosphorylated S PPP1CA 38253.1 1 4 1839.1 111.78 HUMAN 1 -2.5053 24.2742 SEKPFRGSQSPKRYK-p Q9Y2W1;S406-p SEKPFRGSQSPKRYK 0.185461409283341 0.502359877123272 -0.431666666666667 0.173666666666667 14.3813012893346 4.00327609129382 -0.431666666666667 0.173666666666667 0.0364644670999406 0.397806972487479 -2.76319891755686 0.917600271653637 Q9Y2W1 THRAP3 Q9Y2W1.S406.p_THRAP3 Q9Y2W1_S406sS408s_2_2_406_408 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13570.13570.5 7.36 3.59 1.308 6 2 2 0 675.3465 3212.7721 S406s S408s TMT10 390 (K) SDSFAPKTDSEKPFRGsQsPK (R) S(0.0)DS(0.0)FAPKT(0.0)DS(0.0)EKPFRGS(0.99)QS(0.99)PK K:TMT10,s:Phosphorylated S THRAP3 108720.9 2 93 10.2 1293.04 HUMAN 1 -14.3813 4.0033 SEKPSADYVLSVRDT-p Q13882;Y114-p SEKPSADYVLSVRDT 0.127638476804876 0.128626438438198 -0.279333333333333 0.178 18.529370464202 11.7446069769641 -0.279333333333333 0.178 0.0140301706552823 0.0669174375511222 -3.57020325494023 2.28600305265139 Q13882 PTK6 Q13882.Y114.p_PTK6 Q13882_Y114y _1_1_114_114 Q13882 Q13882 Protein-tyrosine kinase 6 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.19131.19247.3 22.78 12.45 4.427 4 1 1 0 696.7095 2008.1479 Y114y TMT10 106 (R) VSEKPSADyVLSVR (D) VS(0.0)EKPS(0.0)ADY(0.99)VLS(0.0)VR K:TMT10,y:Phosphorylated Y PTK6 52403.8 4 1 33.1 58.07 HUMAN 1 -18.5294 11.7446 SEKPSSPSPDLPFTT-p Q9Y4U1;S247-p SEKPSSPSPDLPFTT 0.0688704451228065 0.0109952044988489 -0.503666666666667 -0.514333333333333 25.0533052746109 27.4436697144837 -0.503666666666667 -0.514333333333333 0.00312370111450812 0.00180149486503675 -5.05729004560598 -5.68250406420683 Q9Y4U1 MMACHC Q9Y4U1.S247.p_MMACHC Q9Y4U1_S247s _1_1_247_247 Q9Y4U1 Q9Y4U1|A0A0C4DGU2 Methylmalonic aciduria and homocystinuria type C protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33280.33469.4 18.88 17.64 1.11 6 1 1 0 907.5033 3547.039 S247s TMT10 231 (R) LALLGLAQPSEKPSSPsPDLPFTTPAPK (K) LALLGLAQPS(0.0)EKPS(0.0)S(0.0)PS(0.99)PDLPFT(0.0)T(0.0)PAPK K:TMT10,s:Phosphorylated S MMACHC 32013.1 3 1 3383.1 52.31 HUMAN 1 -25.0533 -27.4437 SEKRDKKSPLIESTA-p O14974;S299-p SEKRDKKSPLIESTA 0.886141859582666 0.0201320943264057 0.0333333333333333 -0.317 1.02426648098598 23.2334028386247 0.0333333333333334 -0.317 0.789902251830055 0.00474962931193117 0.279954390909118 -4.60459652671285 O14974 PPP1R12A O14974.S299.p_PPP1R12A O14974_S299s _1_1_299_299 O14974 O14974|O14974-2|O14974-3|O14974-4|O14974-5 Protein phosphatase 1 regulatory subunit 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13175.13175.3 19.21 15.02 4.376 4 1 1 0 1082.2418 3164.7391 S299s TMT10 296 (R) DKKsPLIESTANMDNNQSQK (T) DKKS(0.99)PLIES(0.0)T(0.0)ANMDNNQS(0.0)QK K:TMT10,s:Phosphorylated S PPP1R12A 115678 27 1 286.1 385.3 HUMAN 1 1.0243 -23.2334 SEKRYSRSLTIAEFK-p Q99426;S31-p SEKRYSRSLTIAEFK 0.175458928500627 0.124737312899916 -0.430666666666667 -0.227666666666667 15.0395612856492 11.9229940187135 -0.430666666666667 -0.227666666666667 0.0313360225765932 0.0642244802196412 -2.88587422305361 -2.3175356639856 Q99426 TBCB Q99426.S31.p_TBCB Q99426_S31s _1_1_31_31 Q99426 Q99426|K7EK42 Tubulin-folding cofactor B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24243.24243.2 11.17 11.17 2.229 2 1 1 0 723.9043 1366.8346 S31s TMT10 31 (R) sLTIAEFK (C) S(0.99)LT(0.0)IAEFK K:TMT10,s:Phosphorylated S TBCB 27610.3 1 1 5842.1 15.9 HUMAN 1 -15.0396 -11.923 SEKVSLGSQIDLQKK-p O75128-2;S349-p SEKVSLGSQIDLQKK 0.23075974588782 0.018519553671557 0.310333333333333 -0.662666666666667 12.2390930646842 23.8418353523664 0.310333333333333 -0.662666666666667 0.0597159978227511 0.00412872982723089 2.37481620916151 -4.75072932696298 O75128 COBL O75128.2.S349.p_COBL O75128-2_S349s _1_1_349_349 O75128-2 O75128-2|O75128-7|O75128-3|O75128-4|A0A0J9YWK3 Isoform 2 of Protein cordon-bleu HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19786.19786.3 11.79 11.79 2.138 2 1 1 0 695.0761 2003.2468 S349s TMT10 345 (K) VSLGsQIDLQKK (K) VS(0.0)LGS(0.99)QIDLQKK K:TMT10,s:Phosphorylated S COBL 144838.3 2 9 254.1 405.31 HUMAN 1 12.2391 -23.8418 SELDELMSEEAYEKY-p P23434;S160-p SELDELMSEEAYEKY 0.490214660431765 0.337687928607312 0.097 0.119 5.70754196930204 6.24595705224487 0.097 0.119 0.268686473376676 0.237358230013451 1.23228429580222 1.32793473522114 P23434 GCSH P23434.S160.p_GCSH P23434_S160s _1_1_160_160 P23434 P23434 Glycine cleavage system H protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29699.29699.3 18.99 18.99 6.551 5 1 1 0 952.1116 2774.3516 S160s TMT10 147 (K) MTLSNPSELDELMsEEAYEK (Y) MT(0.0)LS(0.0)NPS(0.0)ELDELMS(0.99)EEAY(0.0)EK K:TMT10,s:Phosphorylated S GCSH 19112.4 1 2 5475.1 18.99 HUMAN 1 5.7075 6.246 SELDERISEKDSTPY-p Q03001-13;S145-p SELDERISEKDSTPY 0.256105749737423 0.0178298256387578 -0.364 0.387 11.2373835526554 24.0844677182357 -0.364 0.387 0.0752075852625523 0.00390439032722362 -2.19775025360945 4.80985680704778 Q03001 DST Q03001.13.S145.p_DST Q03001-13_S145s _1_1_145_145 Q03001-13 Q03001-13 Isoform 8 of Dystonin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15617.15617.5 10.6 10.6 1.314 5 1 1 0 599.7088 2914.5435 S145s TMT10 137 (K) VSELDERIsEKDSTPYCAK (R) VS(0.0)ELDERIS(0.99)EKDS(0.0)T(0.0)PY(0.0)CAK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DST 103494 2 19 796.3 223.72 HUMAN 1 -11.2374 24.0845 SELEGQPTPPAPPPL-p I3L2J0;T2135-p SELEGQPTPPAPPPL 0.224767265517543 0.0264818589367827 0.22 0.351333333333333 12.456594565013 21.4048635118331 0.22 0.351333333333333 0.0567989808903685 0.00723625143696848 2.41359354110087 4.18287762698378 I3L2J0 NotFound I3L2J0.T2135.p_NotFound I3L2J0_T2135t _1_1_2135_2135 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25474.25474.5 25.49 25.49 10.365 6 1 1 0 896.0521 4396.2662 T2135t TMT10 2113 (R) QPLEPGPVREPTAPESELEGQPtPPAPPPLPETWTPTAR (S) QPLEPGPVREPT(0.0)APES(0.0)ELEGQPT(0.99)PPAPPPLPET(0.0)WT(0.0)PT(0.0)AR t:Phosphorylated T CIC 259056.7 2 35 23.1 999.57 HUMAN 1 12.4566 21.4049 SELGSQLSDEAVEDG-p Q96T37;S182-p SELGSQLSDEAVEDG 0.362826680057782 0.0154803912636741 -0.165 0.346333333333333 8.18061229844795 25.0297914419271 -0.165 0.346333333333333 0.152033316751908 0.00314065951185697 -1.66647828679444 5.04501938950559 Q96T37 RBM15 Q96T37.S182.p_RBM15 Q96T37_S182s _1_1_182_182 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30893.30893.4 25.03 25.03 3.565 3 1 1 0 747.8705 2908.498 S182s TMT10 174 (K) ISELGSQLsDEAVEDGLFHEFK (R) IS(0.0)ELGS(0.0)QLS(0.99)DEAVEDGLFHEFK K:TMT10,s:Phosphorylated S RBM15 107414.9 3 8 55.1 724.11 HUMAN 1 -8.1806 25.0298 SELGTTPSGGGFFQG-p P42166;S214-p SELGTTPSGGGFFQG 0.720703944335452 0.528349737298303 0.06 0.0653333333333333 2.68678324357804 3.72504488502282 0.06 0.0653333333333334 0.538668618847927 0.42412660047222 0.656043378241649 0.86405363764539 P42166 TMPO P42166.S214.p_TMPO P42166_S214s _1_1_214_214 P42166 P42166 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36538.36538.4 23.65 23.65 1.129 9 1 1 0 1194.3696 4694.4758 S214s TMT10 202 (R) DIVPFSELGTTPsGGGFFQGISFPEISTRPPLGSTELQAAK (K) DIVPFS(0.0)ELGT(0.0)T(0.0)PS(0.99)GGGFFQGIS(0.0)FPEIS(0.0)T(0.0)RPPLGS(0.0)T(0.0)ELQAAK K:TMT10,s:Phosphorylated S TMPO 76061.2 1 11 123.1 546.19 HUMAN 1 2.6868 3.725 SELIDELSEDFDRSE-p P20810-6;S456-p SELIDELSEDFDRSE 0.814817468336303 0.00537626259668251 0.0416666666666667 0.534666666666667 1.70680137744574 32.9499531876498 0.0416666666666667 0.534666666666667 0.675025007369651 0.000506996173127578 0.442845520650045 7.36912683174969 P20810 CAST P20810.6.S456.p_CAST P20810-6_S456s _1_1_456_456 P20810-6 P20810-6|P20810-7|P20810-10|E7EVY3|P20810-8|E9PCH5|P20810-4|E9PDE4|P20810-3 Isoform 6 of Calpastatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26814.26814.4 17.15 14.59 5.26 4 1 1 0 707.325 2746.3129 S456s TMT10 447 (R) SESELIDELsEDFDRSECK (E) S(0.0)ES(0.0)ELIDELS(0.99)EDFDRS(0.0)ECK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CAST 85340.8 3 12 314.1 369.19 HUMAN 1 1.7068 32.95 SELKGGGSGTSLERE-p Q8NCN4;S539-p SELKGGGSGTSLERE 0.981188453710745 0.0140887498875376 0.00433333333333333 0.622 0.164384353928146 25.6750336354017 0.00433333333333333 0.622 0.962856495666632 0.0027070522381606 0.0487642231084591 5.21006604945303 Q8NCN4 RNF169 Q8NCN4.S539.p_RNF169 Q8NCN4_S539s _1_1_539_539 Q8NCN4 Q8NCN4 E3 ubiquitin-protein ligase RNF169 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18070.18070.4 11.09 6.82 1.15 5 1 1 0 851.6892 3323.7686 S539s TMT10 536 (K) GGGsGTSLEREQFEGLGSTPDAKLDK (T) GGGS(0.99)GT(0.0)S(0.0)LEREQFEGLGS(0.0)T(0.0)PDAKLDK K:TMT10,s:Phosphorylated S RNF169 78277 2 11 729.1 236.14 HUMAN 1 0.1644 25.675 SELRKHPSSPARVTK-p Q9ULW0;S292-p SELRKHPSSPARVTK 0.957246455101486 0.0239312948460154 0.0163333333333333 -0.904666666666667 0.371042380337978 22.0986841986808 0.0163333333333333 -0.904666666666667 0.918112207550946 0.00616781842695798 0.107702795836218 -4.33991652236076 Q9ULW0 TPX2 Q9ULW0.S292.p_TPX2 Q9ULW0_S292s _1_1_292_292 Q9ULW0 Q9ULW0-2 Targeting protein for Xklp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4061.4061.5 9.95 9.95 1.619 3 1 1 0 395.8352 1895.1794 S292s TMT10 289 (R) KHPsSPARVTK (G) KHPS(0.99)S(0.0)PARVT(0.0)K K:TMT10,s:Phosphorylated S TPX2 86279.1 10 5 599.1 263.33 HUMAN 1 0.371 -22.0987 SELRRWRSEGADPAK-p P15822;S148-p SELRRWRSEGADPAK 0.183247833295496 0.0675856784902588 -0.343666666666667 0.253333333333333 14.4899252528518 15.5687198627343 -0.343666666666667 0.253333333333333 0.0355637439451645 0.0277413769590671 -2.78332235952147 2.98377293835345 P15822 HIVEP1 P15822.S148.p_HIVEP1 P15822_S148s _1_1_148_148 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18243.18243.4 17.88 12.56 4.128 7 1 1 0 918.1918 3589.7684 S148s TMT10 146 (R) WRsEGADPAKFSDLDEQCDSSSLSSK (T) WRS(0.99)EGADPAKFS(0.0)DLDEQCDS(0.0)S(0.0)S(0.0)LS(0.0)S(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S HIVEP1 299483.8 4 3 82.1 631.69 HUMAN 1 -14.4899 15.5687 SELSAEESPEKLGTS-p Q567U6;S305-p SELSAEESPEKLGTS 0.179420120091279 0.0116327352591839 0.267333333333333 -0.441666666666667 14.7317558853368 27.0525082999277 0.267333333333333 -0.441666666666667 0.0336375542710799 0.00197128387767303 2.8282915318897 -5.57539676363508 Q567U6 CCDC93 Q567U6.S305.p_CCDC93 Q567U6_S305s _1_1_305_305 Q567U6 Q567U6|F8W9X7 Coiled-coil domain-containing protein 93 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12358.12358.4 19.48 19.48 5.025 5 1 1 0 691.8531 2684.4255 S305s TMT10 297 (K) QSELSAEEsPEKLGTSQLHR (R) QS(0.0)ELS(0.0)AEES(0.99)PEKLGT(0.0)S(0.0)QLHR K:TMT10,s:Phosphorylated S CCDC93 73481.6 5 3 3247.1 56.09 HUMAN 1 14.7318 -27.0525 SEMDNNCSPTRKDFT-p O95243;S387-p SEMDNNCSPTRKDFT 0.0904989301263926 0.00883365388369699 -0.545333333333333 -0.447 22.1974741068182 29.108488516819 -0.545333333333333 -0.447 0.00602910141723498 0.00122786649346822 -4.367233253403 -6.15602078657506 O95243 MBD4 O95243.S387.p_MBD4 O95243_S387s _1_1_387_387 O95243 O95243|O95243-2|O95243-5 Methyl-CpG-binding domain protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3602.3602.4 8.03 8.03 8.031 3 1 1 0 548.2604 2110.0534 S387s TMT10 378 (K) RGSEMDNNCsPTRK (D) RGS(0.0)EMDNNCS(0.99)PT(0.0)RK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MBD4 66848.5 1 2 4271.1 34.42 HUMAN 1 -22.1975 -29.1085 SEMKYLGSPITTVPK-p P30307;S168-p SEMKYLGSPITTVPK 0.0447859715508879 0.00488731018917169 -0.519 -0.609333333333333 29.8887416382416 33.7386632448659 -0.519 -0.609333333333333 0.00102594915041931 0.000422798731369682 -6.39834425825273 -7.64121412287743 P30307 CDC25C P30307.S168.p_CDC25C P30307_S168s _1_1_168_168 P30307 P30307|P30307-2|P30307-3|P30307-4 M-phase inducer phosphatase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22181.22181.2 12.28 8.34 1.991 4 1 1 0 857.4823 1633.9929 S168s TMT10 165 (K) YLGsPITTVPK (L) Y(0.0)LGS(0.99)PIT(0.0)T(0.0)VPK K:TMT10,s:Phosphorylated S CDC25C 54219.5 5 3 1847.1 111.23 HUMAN 1 -29.8887 -33.7387 SEMNRNISRLQAEIE-p P05787;S315-p SEMNRNISRLQAEIE 0.116256621255214 0.0118666492276053 -0.754 0.617 19.4566831403746 26.9090033029323 -0.754 0.617 0.0113326554754389 0.00203750962839877 -3.76330672607779 5.53648357512662 P05787 KRT8 P05787.S315.p_KRT8 P05787_S315s _1_1_315_315 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22810.22810.3 12.36 12.36 99 1 1 1 0 593.991 1699.9904 S315s Hydrogen 313 (R) NIsRLQAEIEGLK (G) NIS(1.0)RLQAEIEGLK K:TMT10-Lys-Only,s:Phosphorylated S KRT8 53703.3 3 25 69.1 672.47 HUMAN 1 -19.4567 26.909 SENADGQSDENKDDY-p A8MXP9;S814-p SENADGQSDENKDDY 0.177952626351024 0.00220348767094801 -0.509 0.962 14.8316076194014 41.2222523733444 -0.509 0.962 0.0328729923037634 7.54700717129391e-05 -2.84692830264069 10.6950117579533 A8MXP9 NotFound A8MXP9.S814.p_NotFound A8MXP9_S814s _1_1_814_814 A8MXP9 Q68E03|A8MXP9|P43243|D6REM6|P43243-2|B3KM87 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14218.14218.4 24.05 17.52 2.737 9 1 1 0 1418.8676 5592.4645 S814s TMT10 785 (K) NEENTEPGAESSENADDPNKDTSENADGQsDENKDDYTIPDEYR (I) NEENT(0.0)EPGAES(0.0)S(0.0)ENADDPNKDT(0.0)S(0.0)ENADGQS(0.99)DENKDDY(0.0)T(0.0)IPDEY(0.0)R K:TMT10,s:Phosphorylated S MATR3 100478.9 4 29 92.1 615.57 HUMAN 1 -14.8316 41.2223 SENAGIQSLLLSKIS-p Q9P0K7;S235-p SENAGIQSLLLSKIS 0.136977240488925 0.00310921667971064 -0.348666666666667 -0.753333333333333 17.70946593351 37.6652486437136 -0.348666666666667 -0.753333333333334 0.0169454617166101 0.000171188716436688 -3.40370367578243 -9.1292171251888 Q9P0K7 RAI14 Q9P0K7.S235.p_RAI14 Q9P0K7_S235s _1_1_235_235 Q9P0K7 Q9P0K7-2|Q9P0K7-3|Q9P0K7-4 Ankycorbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29982.29982.3 13.32 13.48 6.401 3 1 1 0 671.0455 1931.1577 S235s TMT10 227 (K) LSENAGIQsLLLSK (I) LS(0.0)ENAGIQS(0.99)LLLS(0.0)K K:TMT10,s:Phosphorylated S RAI14 110666.9 1 3 498.1 292.24 HUMAN 1 -17.7095 -37.6652 SENALHASEEEEGEG-p B4DTS2;S362-p SENALHASEEEEGEG 0.989212250278208 0.169828385746525 -0.00233333333333335 -0.179666666666667 0.0958088564944865 10.123911337785 -0.00233333333333334 -0.179666666666667 0.978180755476504 0.0971871543718203 -0.0286368074275895 -2.00242545925907 B4DTS2 NotFound B4DTS2.S362.p_NotFound B4DTS2_S362s_1_1_362_362 B4DTS2 B4DTS2|Q9BZL6|Q9BZL6-2 Serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16688.16688.4 17.84 17.84 2.268 6 1 1 0 1006.706 3942.8187 N357n S362s TMT10 338 (K) SALMDESEDSGVIPGSHSEnALHAsEEEEGEGGK (A) S(0.0)ALMDES(0.0)EDS(0.0)GVIPGS(0.0)HS(0.0)EN(1.0)ALHAS(0.99)EEEEGEGGK K:TMT10,n:Deamidated,s:Phosphorylated S PRKD2 99053.8 1 5 1565.2 131.21 HUMAN 1 -0.0958 -10.1239 SENLELLSLKRLTLT-p Q9BYI3;S422-p SENLELLSLKRLTLT 0.235468649934548 0.431863138583821 -0.355333333333333 -0.0986666666666666 12.0342393342021 4.85867353512104 -0.355333333333333 -0.0986666666666666 0.0626002498515241 0.326687597071793 -2.33840914608035 -1.0778818638919 Q9BYI3 FAM126A Q9BYI3.S422.p_FAM126A Q9BYI3_S422s _1_1_422_422 Q9BYI3 Q9BYI3|Q9BYI3-2 Hyccin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24795.24795.3 12.76 10.93 12.759 2 1 1 0 628.3495 1803.0628 S422s TMT10 413 (R) AQSENLELLsLK (R) AQS(0.0)ENLELLS(0.99)LK K:TMT10,s:Phosphorylated S FAM126A 58366.1 1 3 2241.1 92.02 HUMAN 1 -12.0342 -4.8587 SENNAKESSPEKEAE-p O43719;S452-p SENNAKESSPEKEAE 0.709808893232867 0.00609801306239028 -0.091 0.626166666666667 2.79838869578258 31.9483671032154 -0.0910000000000001 0.626166666666667 0.525002208605785 0.000638503510964832 -0.679156594136691 7.03541438105468 O43719 HTATSF1 O43719.S452.p_HTATSF1 O43719_S452sS453s_2_2_452_453 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13509.13509.4 11.21 11.21 2.359 5 2 2 0 1423.8868 5532.6039 S452s S453s TMT10 434 (K) TEDGGEFEEGASENNAKEssPEKEAEEGCPEKESEEGCPK (R) T(0.0)EDGGEFEEGAS(0.0)ENNAKES(0.99)S(0.99)PEKEAEEGCPEKES(0.0)EEGCPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S HTATSF1 86421.8 6 17 149.1 512 HUMAN 2 -2.7984 31.9484 SENVRKLSRADLTEY-p P31930;S212-p SENVRKLSRADLTEY 0.829977720603796 0.0395364073946374 0.038 0.319 1.55792006254201 18.8179002916493 0.038 0.319 0.698566883931965 0.0131283446919061 0.408511165680073 3.62658535429257 P31930 UQCRC1 P31930.S212.p_UQCRC1 P31930_S212s _1_1_212_212 P31930 P31930 Cytochrome b-c1 complex subunit 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17804.17804.5 15.15 11.97 1.319 6 1 1 0 604.1385 2936.6925 S212s TMT10 210 (R) KLsRADLTEYLSTHYKAPR (M) KLS(0.99)RADLT(0.0)EY(0.0)LS(0.0)T(0.0)HY(0.0)KAPR K:TMT10,s:Phosphorylated S UQCRC1 53329.5 3 2 2464.1 82.19 HUMAN 1 1.5579 18.8179 SENYWRKSYESSEDC-p Q6P6C2;S371-p SENYWRKSYESSEDC 0.700333672511515 0.0101895633915288 -0.0593333333333333 0.474 2.90713145809538 27.9775914085783 -0.0593333333333333 0.474 0.51201991619621 0.00159309200880477 -0.701485694667512 5.83120096745761 Q6P6C2 ALKBH5 Q6P6C2.S371.p_ALKBH5 Q6P6C2_S371s _1_1_371_371 Q6P6C2 Q6P6C2|Q6P6C2-3|K7ER58 RNA demethylase ALKBH5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6522.6522.3 22.11 22.11 1.664 6 1 1 0 704.6193 2031.8763 S371s TMT10 371 (K) sYESSEDCSEAAGSPAR (K) S(0.99)Y(0.0)ES(0.0)S(0.0)EDCS(0.0)EAAGS(0.0)PAR C:Carbamidomethylation,s:Phosphorylated S ALKBH5 44597.5 4 5 578.1 267.46 HUMAN 1 -2.9071 27.9776 SEPDLRCSPVNSHLC-p Q6AWC2-6;S269-p SEPDLRCSPVNSHLC 0.800669679150768 0.42521435734187 0.0413333333333333 0.076 1.8585668072338 4.94305261350558 0.0413333333333333 0.0760000000000001 0.65184347006428 0.32040164609563 0.477247731093222 1.09339292454411 Q6AWC2 WWC2 Q6AWC2.6.S269.p_WWC2 Q6AWC2-6_S269s _1_1_269_269 Q6AWC2-6 Q6AWC2-6|Q6AWC2-4|Q6AWC2-2 Isoform 6 of Protein WWC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12221.12425.4 18.7 18.7 3.983 4 1 1 0 609.7898 2356.1699 S269s TMT10 262 (R) SEPDLRCsPVNSHLCLSR (Q) S(0.0)EPDLRCS(0.99)PVNS(0.0)HLCLS(0.0)R C:Carbamidomethylation,s:Phosphorylated S WWC2 137930.4 2 3 1158.1 171.22 HUMAN 1 1.8586 4.9431 SEPIGPESPSSTECP-p Q56NI9;S512-p SEPIGPESPSSTECP 0.179935774950283 0.00552846196235592 0.259666666666667 -0.525 14.7048919160037 32.7348143367794 0.259666666666667 -0.525 0.0338462695170545 0.000532743998927869 2.82328447159047 -7.29634898514773 Q56NI9 ESCO2 Q56NI9.S512.p_ESCO2 Q56NI9_S512s _1_1_512_512 Q56NI9 Q56NI9 N-acetyltransferase ESCO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17761.17761.3 18.55 18.55 2.615 5 1 1 0 751.0232 2171.0852 S512s TMT10 503 (R) VLSEPIGPEsPSSTECPR (A) VLS(0.0)EPIGPES(0.99)PS(0.0)S(0.0)T(0.0)ECPR C:Carbamidomethylation,s:Phosphorylated S ESCO2 69275.7 2 5 3025.1 62.91 HUMAN 1 14.7049 -32.7348 SEPNTPKSAKCEGDI-p I3L2J0;S2335-p SEPNTPKSAKCEGDI 0.0395731079578075 0.00908580846191256 -0.831666666666667 -0.426666666666667 31.4873411118723 28.8844819739292 -0.831666666666667 -0.426666666666667 0.000710012326919227 0.00129286090394327 -6.89772815985692 -6.09059041104067 I3L2J0 NotFound I3L2J0.S2335.p_NotFound I3L2J0_S2335s _1_1_2335_2335 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19101.19101.3 12.2 6.54 4.226 2 1 1 0 695.3372 2004.0261 S2335s TMT10 2335 (K) sAKCEGDIFTFDR (T) S(0.99)AKCEGDIFT(0.0)FDR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CIC 259056.7 2 43 23.1 999.57 HUMAN 1 -31.4873 -28.8845 SEPPAPASSPEAASP-p Q92766;S1134-p SEPPAPASSPEAASP 0.254658962170373 0.751199828908856 -0.225 0.0383333333333334 11.3037329366642 1.71634818006126 -0.225 0.0383333333333334 0.0740673328941335 0.673542775176322 -2.20940878049521 0.444977819148262 Q92766 RREB1 Q92766.S1134.p_RREB1 Q92766_S1134sS1135sS1140s_3_3_1134_1140 Q92766 Q92766 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12796.12796.4 11.4 11.4 2.795 8 3 3 0 906.4177 3382.7581 S1134s S1135s S1140s TMT10 1125 (K) ESSEPPAPAssPEAAsPTEQGPAGTSKK (R) ES(0.0)S(0.0)EPPAPAS(0.99)S(0.99)PEAAS(0.99)PT(0.0)EQGPAGT(0.0)S(0.0)KK K:TMT10,s:Phosphorylated S RREB1 184269.8 1 35 179.1 480.48 HUMAN 1 -11.3037 1.7163 SEPPNPASSSKSEKR-p Q92575;S456-p SEPPNPASSSKSEKR 0.314849254680584 0.0134399239574354 0.150333333333333 -0.384 9.39093812989699 26.0234472051072 0.150333333333333 -0.384 0.115055182864717 0.00249836150423899 1.87606029343624 -5.30077086067528 Q92575 UBXN4 Q92575.S456.p_UBXN4 Q92575_S456s _1_1_456_456 Q92575 Q92575 UBX domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10260.10260.2 16.62 11.09 1.143 6 1 1 0 963.4838 1845.9958 S456s TMT10 446 (R) VTSSEPPNPAsSSK (S) VT(0.0)S(0.0)S(0.0)EPPNPAS(0.99)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S UBXN4 57061.8 4 2 3884.1 41.41 HUMAN 1 9.3909 -26.0234 SEPVKEESSELEQPF-p Q15424;S234-p SEPVKEESSELEQPF 0.234816848145482 0.0409810113459499 0.184333333333333 0.262333333333333 12.0633048995919 18.5956078667606 0.184333333333333 0.262333333333333 0.0621826906457161 0.0138178098932493 2.34356814150542 3.58076943741623 Q15424 SAFB Q15424.S234.p_SAFB Q15424_S234s _1_1_234_234 Q15424 Q14151|Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27555.27555.5 18.45 18.45 1.234 7 1 1 0 1023.9351 5035.6592 S234s TMT10 217 (K) ILDILGETCKSEPVKEEsSELEQPFAQDTSSVGPDRK (L) ILDILGET(0.0)CKS(0.0)EPVKEES(0.99)S(0.0)ELEQPFAQDT(0.0)S(0.0)S(0.0)VGPDRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SAFB 103096.3 8 21 83.1 629.62 HUMAN 1 12.0633 18.5956 SEPYEPISPPQVPVV-p O75376-2;S2048-p SEPYEPISPPQVPVV 0.844428199093222 0.209652597955105 -0.028 0.169333333333333 1.4211332903101 8.9255705519633 -0.028 0.169333333333333 0.720919330925251 0.12806868339625 -0.376416685132077 1.79483887927391 O75376 NCOR1 O75376.2.S2048.p_NCOR1 O75376-2_S2048s _1_1_2048_2048 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17988.17988.3 19.94 19.94 6.177 5 1 1 0 994.1821 2900.5558 S2048s TMT10 2037 (R) SHVSSEPYEPIsPPQVPVVHEK (Q) S(0.0)HVS(0.0)S(0.0)EPY(0.0)EPIS(0.99)PPQVPVVHEK K:TMT10,s:Phosphorylated S NCOR1 259453.1 6 29 35.1 889.74 HUMAN 1 -1.4211 8.9256 SEQKQQFSPSMTERK-p Q8TDB6;S202-p SEQKQQFSPSMTERK 0.246863210495205 0.0943861126647731 -0.227666666666667 -0.34 11.6174270768073 13.5579603520611 -0.227666666666667 -0.34 0.0689060400636985 0.0440761817059145 -2.26465478508575 -2.61060479295006 Q8TDB6 DTX3L Q8TDB6.S202.p_DTX3L Q8TDB6_S202s _1_1_202_202 Q8TDB6 Q8TDB6 E3 ubiquitin-protein ligase DTX3L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10963.10963.3 11.29 11.29 3.047 3 1 1 0 507.2321 1439.715 S202s TMT10 199 (K) QQFsPSMTER (K) QQFS(0.99)PS(0.0)MT(0.0)ER s:Phosphorylated S DTX3L 84636.9 3 2 2047.1 100.69 HUMAN 1 -11.6174 -13.558 SEQNWANYSAEQNRM-p P17302;Y313-p SEQNWANYSAEQNRM 0.701391719781544 0.0504318281101793 0.161 0.339 2.89736304672477 17.3353561538288 0.161 0.339 0.513172878200686 0.0184698932181481 0.699487348557934 3.63959596553221 P17302 GJA1 P17302.Y313.p_GJA1 P17302_Y313y _1_1_313_313 P17302 P17302 Gap junction alpha-1 protein GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11048.11048.3 25.95 25.95 4.778 3 1 1 0 735.6572 2124.9896 Y313y TMT10 304 (K) QASEQNWANySAEQNR (M) QAS(0.0)EQNWANY(0.99)S(0.0)AEQNR y:Phosphorylated Y GJA1 43521.1 2 1 117.1 25.95 HUMAN 1 2.8974 17.3354 SEQSDNESVQSGRSH-p Q6PD62;S1106-p SEQSDNESVQSGRSH 0.924864295750906 0.0145244896537955 0.0236666666666667 1.06466666666667 0.668305029974137 25.4653695793115 0.0236666666666666 1.06466666666667 0.857372396330565 0.0028409464136185 0.188473384111551 5.15602236720622 Q6PD62 CTR9 Q6PD62.S1106.p_CTR9 Q6PD62_S1106s _1_1_1106_1106 Q6PD62 Q6PD62 RNA polymerase-associated protein CTR9 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3610.3610.4 14.29 14.29 2.711 5 1 1 0 572.017 2205.0806 S1106s TMT10 1094 (K) RRPSGSEQSDNEsVQSGR (S) RRPS(0.0)GS(0.0)EQS(0.0)DNES(0.99)VQS(0.0)GR s:Phosphorylated S CTR9 134412.8 1 10 152.1 508.81 HUMAN 1 0.6683 25.4654 SERALTRSLSRPSSL-p Q12802-2;S2565-p SERALTRSLSRPSSL 0.152381872383781 0.204882543802633 -0.379333333333333 -0.175 16.4409021056702 9.05830806975032 -0.379333333333333 -0.175 0.0226939341018093 0.124213612639592 -3.15331252628649 -1.81779835929098 Q12802 AKAP13 Q12802.2.S2565.p_AKAP13 Q12802-2_S2565s _1_1_2565_2565 Q12802-2 Q12802-2|Q12802-4|A8MYJ1|A0A087WTD7 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16386.16386.3 12.96 12.96 2.081 4 1 1 0 671.3656 1932.1166 S2565s TMT10 2565 (R) sLSRPSSLIEQEK (Q) S(0.99)LS(0.0)RPS(0.0)S(0.0)LIEQEK K:TMT10,s:Phosphorylated S AKAP13 310921 2 25 66.1 683.25 HUMAN 1 -16.4409 -9.0583 SEREKEISGLWNELD-p Q86UP2;S1009-p SEREKEISGLWNELD 0.106562833231388 0.607941318314778 -0.556666666666667 0.0496666666666667 20.4714483387266 2.9352675857696 -0.556666666666667 0.0496666666666667 0.00897129558792673 0.508713474857682 -3.98086673875983 0.707135440962183 Q86UP2 KTN1 Q86UP2.S1009.p_KTN1 Q86UP2_S1009s _1_1_1009_1009 Q86UP2 Q86UP2|Q86UP2-4|Q86UP2-3|Q86UP2-2|G3V4Y7|B7Z6P3 Kinectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36624.36624.3 14.96 14.96 6.668 2 1 1 0 681.3583 1962.0948 S1009s TMT10 1007 (K) EIsGLWNELDSLK (D) EIS(0.99)GLWNELDS(0.0)LK K:TMT10,s:Phosphorylated S KTN1 156557.7 1 11 186.1 473.59 HUMAN 1 -20.4714 2.9353 SERGLGFSIAGGKGS-p A0A0G2JPP5;S875-p SERGLGFSIAGGKGS 0.667400215435917 0.0507442801508768 -0.0836666666666667 0.310666666666667 3.28337020157617 17.2925912301658 -0.0836666666666667 0.310666666666667 0.469529603960347 0.0186526644231961 -0.777403068454981 3.31790436412016 A0A0G2JPP5 SCRIB A0A0G2JPP5.S875.p_SCRIB A0A0G2JPP5_S875s _1_1_875_875 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22699.22699.2 13.69 13.69 99 1 1 1 0 722.9037 1364.8302 S875s TMT10 871 (R) GLGFsIAGGK (G) GLGFS(1.0)IAGGK K:TMT10,s:Phosphorylated S SCRIB 178690.9 2 21 22.1 1004.81 HUMAN 1 -3.2834 17.2926 SERGLSISGEGGAFE-p Q8TDD1-2;S698-p SERGLSISGEGGAFE 0.666595970118167 0.678399854906874 -0.066 -0.0636666666666666 3.29399846532246 2.30289722524444 -0.066 -0.0636666666666666 0.468381953363546 0.588450962413083 -0.779519506765796 -0.574812297841863 Q8TDD1 DDX54 Q8TDD1.2.S698.p_DDX54 Q8TDD1-2_S698s _1_1_698_698 Q8TDD1-2 Q8TDD1-2 Isoform 2 of ATP-dependent RNA helicase DDX54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.37150.37150.3 27.17 27.17 2.416 3 1 1 0 1172.2279 3434.7059 S698s TMT10 694 (R) GLSIsGEGGAFEQQAAGAVLDLMGDEAQNLTR (G) GLS(0.0)IS(0.99)GEGGAFEQQAAGAVLDLMGDEAQNLT(0.0)R s:Phosphorylated S DDX54 98949.4 1 5 373.1 338.92 HUMAN 1 -3.294 -2.3029 SERGVRLSLPRASSL-p D3DTX6;S94-p SERGVRLSLPRASSL 0.772037219526426 0.00827888839024055 -0.094 -0.444 2.14878351566719 29.608831758605 -0.094 -0.444 0.609707656016646 0.00109425067740663 -0.541504799372499 -6.30416564233328 D3DTX6 PPP1R9B D3DTX6.S94.p_PPP1R9B D3DTX6_S94s _1_1_94_94 D3DTX6 D3DTX6|Q96SB3 Neurabin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15384.15598.3 9.67 9.67 99 1 1 1 0 402.9021 1126.7258 S94s TMT10 90 (R) GVRLsLPR (A) GVRLS(1.0)LPR s:Phosphorylated S PPP1R9B 89503.8 1 2 1790.1 114.58 HUMAN 1 -2.1488 -29.6088 SERKDELSDWSLAGE-p P51114-2;S420-p SERKDELSDWSLAGE 0.888804722871773 0.0315935807224558 0.0266666666666667 0.373 0.998279902642806 20.2713461394937 0.0266666666666667 0.373 0.794642904278584 0.00939432078995991 0.273446903452142 3.93368285277511 P51114 FXR1 P51114.2.S420.p_FXR1 P51114-2_S420s _1_1_420_420 P51114-2 P51114|B4DXZ6|P51114-2|P51114-3 Isoform 2 of Fragile X mental retardation syndrome-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18949.18949.3 8.79 4.23 1.253 3 1 1 0 759.0011 2195.005 S420s TMT10 417 (K) DELsDWSLAGEDDRDSR (H) DELS(0.99)DWS(0.0)LAGEDDRDS(0.0)R s:Phosphorylated S FXR1 61190.3 2 9 553.2 273.48 HUMAN 1 0.9983 20.2713 SERKEMKSPELSTVD-p Q15916;S202-p SERKEMKSPELSTVD 0.0767656687210305 0.0140449661692756 -0.499333333333333 0.394666666666667 23.9079447417184 25.6923154537268 -0.499333333333333 0.394666666666667 0.0040663572021418 0.00269630150813052 -4.77240446260342 5.21453864470531 Q15916 ZBTB6 Q15916.S202.p_ZBTB6 Q15916_S202s _1_1_202_202 Q15916 Q15916 Zinc finger and BTB domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23623.23623.4 12.38 7.65 3.083 3 1 1 0 612.833 2368.3401 S202s TMT10 199 (K) EMKsPELSTVDIGFK (D) EMKS(0.99)PELS(0.0)T(0.0)VDIGFK K:TMT10,s:Phosphorylated S ZBTB6 49261.9 3 1 6325.1 12.38 HUMAN 1 -23.9079 25.6923 SERLLQLSLERNGAR-p Q9Y2J4-4;S224-p SERLLQLSLERNGAR 0.095467434057863 0.865842304013024 -0.343 0.0183333333333334 21.6389387404665 0.881494724958132 -0.343 0.0183333333333334 0.00685655755592008 0.81630137399787 -4.23984856837511 0.243858985637864 Q9Y2J4 AMOTL2 Q9Y2J4.4.S224.p_AMOTL2 Q9Y2J4-4_S224s _1_1_224_224 Q9Y2J4-4 Q9Y2J4-4|Q9Y2J4-2|Q9Y2J4-3 Isoform 4 of Angiomotin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24785.24785.2 10.36 5.37 99 1 1 1 0 640.8633 1200.7513 S224s TMT10 220 (R) LLQLsLER (N) LLQLS(1.0)LER s:Phosphorylated S AMOTL2 92272.2 2 3 849.1 212.62 HUMAN 1 -21.6389 0.8815 SERLQLGTPPPLLAA-p Q9P2N5;T447-p SERLQLGTPPPLLAA 0.548579795198745 0.00775531376968322 0.0923333333333333 0.531666666666667 4.81187544140519 30.1186663566326 0.0923333333333333 0.531666666666667 0.330226906262283 0.000973045983523291 1.06946779725365 6.45801975123294 Q9P2N5 RBM27 Q9P2N5.T447.p_RBM27 Q9P2N5_T447t _1_1_447_447 Q9P2N5 Q9P2N5 RNA-binding protein 27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27731.27933.3 16.69 16.69 99 1 1 1 0 552.6529 1575.9784 T447t TMT10 443 (R) LQLGtPPPLLAAR (L) LQLGT(1.0)PPPLLAAR t:Phosphorylated T RBM27 119172.2 4 3 1221.1 164.77 HUMAN 1 4.8119 30.1187 SERLRSFSMQDLTTI-p A0A1C7CYY3;S152-p SERLRSFSMQDLTTI 0.200797395490016 0.0355964478505024 0.228 -0.471 13.548402460925 19.4983174803313 0.228 -0.471 0.0441732907581051 0.0112245322470039 2.61037162267226 -3.76868735553089 A0A1C7CYY3 NotFound A0A1C7CYY3.S152.p_NotFound A0A1C7CYY3_S152s _1_1_152_152 A0A1C7CYY3 A0A1C7CYY3|Q9H902-3|Q9H902-2 Receptor expression-enhancing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24271.24271.2 9.27 9.27 1.398 4 1 1 0 804.3896 1527.8038 S152s TMT10 150 (R) SFsMQDLTTIR (G) S(0.0)FS(0.99)MQDLT(0.0)T(0.0)IR s:Phosphorylated S REEP1 32249.4 1 1 4989.1 24.14 HUMAN 1 13.5484 -19.4983 SERNLFISCKSSHDR-p P42166;S279-p SERNLFISCKSSHDR 0.574453900470181 0.249451339611809 -0.0753333333333333 -0.118 4.43104592786713 7.94484187937133 -0.0753333333333334 -0.118 0.360491813956008 0.160515069835523 -0.998678591619103 -1.62507931278715 P42166 TMPO P42166.S279.p_TMPO P42166_S279s _1_1_279_279 P42166 P42166 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20062.20062.2 9.73 9.73 99 1 1 1 0 710.3743 1339.7808 S279s TMT10 275 (R) NLFIsCK (S) NLFIS(1.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TMPO 76061.2 1 14 123.1 546.19 HUMAN 1 -4.431 -7.9448 SERRKRRSTDSSSVS-p Q9H8G2;S89-p SERRKRRSTDSSSVS 0.849397707010341 0.314577143351567 0.0343333333333333 -0.097 1.37263817652851 6.63843311261536 0.0343333333333333 -0.097 0.729014526664252 0.216848633004926 0.364904709015637 -1.39719601415315 Q9H8G2 CAAP1 Q9H8G2.S89.p_CAAP1 Q9H8G2_S89s _1_1_89_89 Q9H8G2 Q9H8G2 Caspase activity and apoptosis inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11566.11566.2 17.67 17.67 1.147 8 1 1 0 1090.031 2099.0868 S89s TMT10 89 (R) sTDSSSVSGSLQQETK (Y) S(0.99)T(0.0)DS(0.0)S(0.0)S(0.0)VS(0.0)GS(0.0)LQQET(0.0)K K:TMT10,s:Phosphorylated S CAAP1 38994.8 4 1 3116.1 60.32 HUMAN 1 1.3726 -6.6384 SERVRNMSPDEIKIP-p Q9UHR5;S113-p SERVRNMSPDEIKIP 0.731756915583991 0.824952597623758 0.0473333333333333 0.023 2.57172186577291 1.17015727169517 0.0473333333333333 0.023 0.553130763633676 0.763808123181712 0.631995967405568 0.316000453703826 Q9UHR5 SAP30BP Q9UHR5.S113.p_SAP30BP Q9UHR5_S113s _1_1_113_113 Q9UHR5 Q9UHR5|Q9UHR5-2|X6R3T8|J3KRU5|F5H478 SAP30-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16840.17452.3 17.72 17.72 99 1 1 1 0 696.0125 2006.0578 S113s Hydrogen 111 (R) NMsPDEIKIPPEPPGR (C) NMS(1.0)PDEIKIPPEPPGR K:TMT10-Lys-Only,s:Phosphorylated S SAP30BP 33983.9 20 4 1421.1 144.21 HUMAN 1 2.5717 1.1702 SERWQPDTEEEYEDS-p Q12874;T475-p SERWQPDTEEEYEDS 0.902824138970015 0.870866417140156 -0.0203333333333333 -0.018 0.870690614772397 0.846052685057527 -0.0203333333333333 -0.018 0.818334646270966 0.822990328370663 -0.241120417076354 -0.23478102719233 Q12874 SF3A3 Q12874.T475.p_SF3A3 Q12874_T475t _1_1_475_475 Q12874 Q12874 Splicing factor 3A subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16483.16483.4 23.6 23.6 5.88 4 1 1 0 781.1306 3041.5307 T475t TMT10 471 (R) WQPDtEEEYEDSSGNVVNKK (T) WQPDT(0.99)EEEY(0.0)EDS(0.0)S(0.0)GNVVNKK K:TMT10,t:Phosphorylated T SF3A3 59190.2 4 5 2105.1 97.51 HUMAN 1 -0.8707 -0.8461 SESEKEESAEELQAA-p O00193;S147-p SESEKEESAEELQAA 0.235718859550154 0.746458577174133 -0.629666666666667 0.322 12.0180864976217 1.75291524841367 -0.629666666666667 0.322 0.062833514242605 0.667895435067788 -2.33554302341207 0.453310067714725 O00193 C11orf58 O00193.S147.p_C11orf58 O00193_S147s _1_1_147_147 O00193 O00193 Small acidic protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13751.13751.3 21.89 15.36 99 1 1 1 0 930.7671 2710.3096 S147s TMT10 145 (K) EEsAEELQAAEHPDEVEDPK (N) EES(1.0)AEELQAAEHPDEVEDPK K:TMT10,s:Phosphorylated S SMAP 20389.2 1 4 825.1 217.63 HUMAN 1 -12.0181 1.7529 SESHHGGSPIHWVLP-p J3QR07;S424-p SESHHGGSPIHWVLP 0.260386657049657 0.0169763171147853 0.172 0.338 11.0771609826742 24.4264132964246 0.172 0.338 0.0780340058285349 0.00360876556753603 2.1696328264395 4.89402997078698 J3QR07 YTHDC1 J3QR07.S424.p_YTHDC1 J3QR07_S424s _1_1_424_424 J3QR07 J3QR07|Q96MU7|Q96MU7-2 YTH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19631.19631.4 23.39 23.39 2.39 5 1 1 0 731.6223 2843.5027 S424s TMT10 415 (R) LSSESHHGGsPIHWVLPAGMSAK (M) LS(0.0)S(0.0)ES(0.0)HHGGS(0.99)PIHWVLPAGMS(0.0)AK K:TMT10,s:Phosphorylated S YTHDC1 85871.1 5 13 702.1 239.92 HUMAN 1 11.0772 24.4264 SESISNLSEAGSIKK-p P30622;S200-p SESISNLSEAGSIKK 0.677824728505112 0.13254427747244 -0.063 -0.210333333333333 3.16143379267558 11.5679946911547 -0.063 -0.210333333333333 0.482899349897471 0.0696948248310075 -0.753014856435641 -2.25485704270907 P30622 CLIP1 P30622.S200.p_CLIP1 P30622_S200s _1_1_200_200 P30622 P30622|P30622-1|P30622-2|J3KP58|F5H1T5 CAP-Gly domain-containing linker protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17617.17617.2 16.81 16.81 2.392 6 1 1 0 1066.5485 2052.1225 S200s TMT10 191 (K) TASESISNLsEAGSIK (K) T(0.0)AS(0.0)ES(0.0)IS(0.0)NLS(0.99)EAGS(0.0)IK K:TMT10,s:Phosphorylated S CLIP1 162985.2 16 7 372.1 339.16 HUMAN 1 -3.1614 -11.568 SESLIDASEDSQLEA-p O94888;S285-p SESLIDASEDSQLEA 0.14371133901046 0.152335101858858 0.256666666666667 0.289333333333333 17.1991681596807 10.7457415137336 0.256666666666667 0.289333333333333 0.0190582572164754 0.0842220578548807 3.30196618761395 2.11069633924252 O94888 UBXN7 O94888.S285.p_UBXN7 O94888_S285s _1_1_285_285 O94888 O94888|C9JAT7 UBX domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24191.24744.3 19.91 18.29 2.348 4 1 1 0 748.3596 2163.0978 S285s TMT10 278 (R) SESLIDAsEDSQLEAAIR (A) S(0.0)ES(0.0)LIDAS(0.99)EDS(0.0)QLEAAIR s:Phosphorylated S UBXN7 55260.7 7 3 3980.1 39.79 HUMAN 1 17.1992 10.7457 SESLSNCSIGKKRLE-p Q92625;S652-p SESLSNCSIGKKRLE 0.43020000791812 0.561638266089434 -0.162 0.0666666666666667 6.74649018975256 3.3756297268199 -0.162 0.0666666666666667 0.211519777528317 0.459660332969112 -1.41656053732775 0.795606813578059 Q92625 ANKS1A Q92625.S652.p_ANKS1A Q92625_S652s _1_1_652_652 Q92625 Q92625 Ankyrin repeat and SAM domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11743.11743.3 12.97 8.14 2.786 4 1 1 0 573.952 1639.8725 S652s TMT10 645 (R) SESLSNCsIGK (K) S(0.0)ES(0.0)LS(0.0)NCS(0.99)IGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANKS1A 124075.6 1 7 709.1 238.85 HUMAN 1 -6.7465 3.3756 SESNKRKSNFSNSAD-p P45973;S92-p SESNKRKSNFSNSAD 0.188778224113783 0.00448198400218091 -0.288333333333333 -0.638666666666667 14.2012911415467 34.4720770661068 -0.288333333333333 -0.638666666666667 0.038007638420903 0.000357102008931669 -2.72995129548045 -7.90187516276015 P45973 CBX5 P45973.S92.p_CBX5 P45973_S92s _1_1_92_92 P45973 P45973 Chromobox protein homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13705.13705.3 14.59 10.95 2.765 3 1 1 0 579.2814 1655.8641 S92s TMT10 92 (K) sNFSNSADDIK (S) S(0.99)NFS(0.0)NS(0.0)ADDIK K:TMT10,s:Phosphorylated S CBX5 22395.7 8 2 1801.1 114.16 HUMAN 1 -14.2013 -34.4721 SESPFAWSPLAGEKF-p Q9NYZ3;S72-p SESPFAWSPLAGEKF 0.968204070179253 0.0112538164768556 0.00766666666666666 -0.391666666666667 0.274111761380183 27.2868071921674 0.00766666666666665 -0.391666666666667 0.938834031598999 0.00186775230387033 0.080367017012041 -5.6393684076374 Q9NYZ3 GTSE1 Q9NYZ3.S72.p_GTSE1 Q9NYZ3_S72s _1_1_72_72 Q9NYZ3 Q9NYZ3 G2 and S phase-expressed protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35072.35072.4 19.72 19.72 1.893 5 1 1 0 989.7397 3875.9727 S72s Hydrogen 45 (R) CIAASLELNNPVPEQPPLPTSESPFAWsPLAGEK (F) CIAAS(0.0)LELNNPVPEQPPLPT(0.0)S(0.0)ES(0.0)PFAWS(0.99)PLAGEK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S GTSE1 77156.9 5 1 271.1 394.28 HUMAN 1 0.2741 -27.2868 SESPGTPSPDGAAWE-p Q96PE2;S152-p SESPGTPSPDGAAWE 0.299833271733525 0.0399314665698219 -0.24 0.285333333333333 9.8319383343304 18.7557109842383 -0.24 0.285333333333333 0.103945613432861 0.0133176900033523 -1.952526660845 3.61373808655749 Q96PE2 ARHGEF17 Q96PE2.S152.p_ARHGEF17 Q96PE2_S152s _1_1_152_152 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12182.12182.3 13.68 13.68 1.913 5 1 1 0 915.4215 2664.2851 S152s TMT10 140 (R) RPSADSESPGTPsPDGAAWEPPAR (E) RPS(0.0)ADS(0.0)ES(0.0)PGT(0.0)PS(0.99)PDGAAWEPPAR s:Phosphorylated S ARHGEF17 223779.6 1 4 30.1 908.19 HUMAN 1 -9.8319 18.7557 SESPVILTPNAKRTL-p Q6P4F7;T323-p SESPVILTPNAKRTL 0.381973221450573 0.0310889125388133 0.163666666666667 -0.397 7.7304161401861 20.3720635204686 0.163666666666667 -0.397 0.168639142792551 0.00917896360689111 1.58835723828234 -3.95546859102967 Q6P4F7 ARHGAP11A Q6P4F7.T323.p_ARHGAP11A Q6P4F7_S318sT323t_2_2_318_323 Q6P4F7 Q6P4F7|Q6P4F7-3|Q6P4F7-2|H3BR51 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26203.26203.3 11.83 11.83 1.153 3 2 2 0 767.0764 2139.2789 S318s T323t TMT10 312 (R) IAQLSEsPVILtPNAK (R) IAQLS(0.0)ES(0.99)PVILT(0.99)PNAK K:TMT10,s:Phosphorylated S,t:Phosphorylated T ARHGAP11A 114948.2 2 22 414.1 321.53 HUMAN 1 7.7304 -20.3721 SESRLAPTPTEGKVR-p Q8IY33;T330-p SESRLAPTPTEGKVR 0.761476943047114 0.0127124067900697 0.0826666666666667 -0.541333333333333 2.26664660516146 26.4265708342645 0.0826666666666667 -0.541333333333333 0.593383327303757 0.00227689454479842 0.567075321155858 -5.40713985586322 Q8IY33 MICALL2 Q8IY33.T330.p_MICALL2 Q8IY33_T330t _1_1_330_330 Q8IY33 Q8IY33|Q8IY33-5|Q8IY33-2|Q8IY33-4 MICAL-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12476.12476.2 10.86 10.86 1.906 2 1 1 0 726.4 1371.8248 T330t TMT10 327 (R) LAPtPTEGK (V) LAPT(0.99)PT(0.0)EGK K:TMT10,t:Phosphorylated T MICALL2 98299.3 1 20 387.1 332.82 HUMAN 1 2.2666 -26.4266 SESRRRYSFDFCSLD-p Q9Y6X0;S893-p SESRRRYSFDFCSLD 0.804045302605656 0.732625879354503 0.0433333333333333 0.037 1.82677601771757 1.86292859576413 0.0433333333333333 0.037 0.656632536157565 0.651189126940509 0.470089190183944 0.478173827010972 Q9Y6X0 SETBP1 Q9Y6X0.S893.p_SETBP1 Q9Y6X0_S893s _1_1_893_893 Q9Y6X0 Q9Y6X0 SET-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23385.23385.3 20.58 15.23 3.162 7 1 1 0 953.7608 2779.3082 S893s Hydrogen 891 (R) RYsFDFCSLDNPEAIPSDTSTK (N) RY(0.0)S(0.99)FDFCS(0.0)LDNPEAIPS(0.0)DT(0.0)S(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S SETBP1 175746.2 1 6 1489.1 137.6 HUMAN 1 1.8268 1.8629 SESSMEDSPTTERLN-p A0A0A0MTH9;S95-p SESSMEDSPTTERLN 0.654054249121603 0.293120144405209 0.0743333333333333 0.122333333333333 3.45727118816467 7.03585634408458 0.0743333333333333 0.122333333333333 0.451100056178739 0.197885679077003 0.811852728059949 1.46688087915243 A0A0A0MTH9 NotFound A0A0A0MTH9.S95.p_NotFound A0A0A0MTH9_S95s _1_1_95_95 A0A0A0MTH9 O14981|A0A0A0MTH9 TATA-binding protein-associated factor 172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5299.5299.3 14.68 14.68 1.937 8 1 1 0 826.3623 2397.1037 S95s TMT10 82 (R) TRQEPTSESSMEDsPTTER (L) T(0.0)RQEPT(0.0)S(0.0)ES(0.0)S(0.0)MEDS(0.99)PT(0.0)T(0.0)ER s:Phosphorylated S BTAF1 209212 2 2 2247.1 91.7 HUMAN 1 3.4573 7.0359 SESSNYDSELEKEIK-p P46100;S819-p SESSNYDSELEKEIK 0.254230063174712 0.00361099019317346 0.238666666666667 0.637333333333333 11.3208106690448 36.3249759064256 0.238666666666667 0.637333333333334 0.0737766503237534 0.000233078604586626 2.21241103140088 8.59501603798038 P46100 ATRX P46100.S819.p_ATRX P46100_S819s _1_1_819_819 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12076.12076.3 19.79 19.79 3.671 6 1 1 0 761.6871 2203.0767 S819s TMT10 809 (R) QTQSESSNYDsELEK (E) QT(0.0)QS(0.0)ES(0.0)S(0.0)NY(0.0)DS(0.99)ELEK K:TMT10,s:Phosphorylated S ATRX 285034.2 10 22 18.1 1035.36 HUMAN 1 11.3208 36.325 SESSQLISPPLAQAI-p P42166;S370-p SESSQLISPPLAQAI 0.152434937700836 0.372997549926889 0.311666666666667 0.0973333333333333 16.4314355632546 5.68156118285422 0.311666666666667 0.0973333333333334 0.0227434552010526 0.270298653163965 3.15147497937528 1.22734408332361 P42166 TMPO P42166.S370.p_TMPO P42166_S370s _1_1_370_370 P42166 P42166 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25819.25819.3 14.79 14.79 3.314 4 1 1 0 816.7578 2368.2921 S370s TMT10 359 (K) ALEESESSQLIsPPLAQAIR (D) ALEES(0.0)ES(0.0)S(0.0)QLIS(0.99)PPLAQAIR s:Phosphorylated S TMPO 76061.2 2 19 123.1 546.19 HUMAN 1 16.4314 5.6816 SESSTKDSLKSMTLP-p Q6WKZ4;S389-p SESSTKDSLKSMTLP 0.368440852136111 0.0132031691560471 0.303 -0.501666666666667 8.04122180607725 26.1634874637959 0.303 -0.501666666666667 0.156992107434827 0.00241908569669009 1.64231075900297 -5.33754783945363 Q6WKZ4 RAB11FIP1 Q6WKZ4.S389.p_RAB11FIP1 Q6WKZ4_S389s _1_1_389_389 Q6WKZ4 Q6WKZ4|Q6WKZ4-3|E7EX40|Q6WKZ4-2 Rab11 family-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11549.11549.3 10.93 4.13 2.263 5 1 1 0 697.3842 2010.1686 S389s TMT10 380 (R) QLSESSTKDsLK (S) QLS(0.0)ES(0.0)S(0.0)T(0.0)KDS(0.99)LK K:TMT10,s:Phosphorylated S RAB11FIP1 137564.1 1 10 56.1 721.17 HUMAN 1 8.0412 -26.1635 SETHSEGSEYEELPK-p Q5JSZ5;S1139-p SETHSEGSEYEELPK 0.0147628603234759 0.00178284028886761 -1.059 -1.17 43.1952480187061 43.3497938153508 -1.059 -1.17 4.79154088395106e-05 4.62402973815367e-05 -11.6961911618682 -11.7457414719468 Q5JSZ5 PRRC2B Q5JSZ5.S1139.p_PRRC2B Q5JSZ5_S1136sS1139s_2_2_1136_1139 Q5JSZ5 Q5JSZ5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15929.15929.4 10.58 7.9 1.166 5 2 2 0 628.2859 2350.1815 S1136s S1139s TMT10 1130 (R) VASETHsEGsEYEELPK (R) VAS(0.0)ET(0.0)HS(0.99)EGS(0.99)EY(0.0)EELPK K:TMT10,s:Phosphorylated S PRRC2B 244103.4 6 91 36.2 882.05 HUMAN 1 -43.1952 -43.3498 SETRAFLSPPTLLEG-p Q96PC5;S1144-p SETRAFLSPPTLLEG 0.136378264556902 0.033735830597684 0.296333333333333 0.343 17.7445970148691 19.8435260216752 0.296333333333333 0.343 0.0168089388988659 0.0103668639199841 3.41075989572474 3.84189038759382 Q96PC5 MIA2 Q96PC5.S1144.p_MIA2 Q96PC5_S1144s _1_1_1144_1144 Q96PC5 Q96PC5|G3V599|O15320-5|O15320-10|O15320-3|O15320-4|O15320-6|O15320-8|O15320-9 Melanoma inhibitory activity protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34005.34617.3 16.09 14.34 15.363 2 1 1 0 607.3354 1740.0257 S1144s TMT10 1141 (R) AFLsPPTLLEGPLR (L) AFLS(0.99)PPT(0.0)LLEGPLR s:Phosphorylated S MIA2 160460.4 6 5 569.1 269.96 HUMAN 1 17.7446 19.8435 SETRLDRSKGDARSD-p Q96S15;S633-p SETRLDRSKGDARSD 0.45677574660352 0.2750508709707 0.237 -0.146 6.27070198063697 7.38670913141992 0.237 -0.146 0.236009672335882 0.182527828394805 1.33264701375249 -1.52810328792415 Q96S15 WDR24 Q96S15.S633.p_WDR24 Q96S15_S633s _1_1_633_633 Q96S15 Q96S15|Q96S15-2 GATOR complex protein WDR24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.4154.4154.4 7.57 4.32 99 1 1 1 0 389.7144 1475.8694 S633s TMT10 630 (R) LDRsKGDAR (S) LDRS(1.0)KGDAR K:TMT10,s:Phosphorylated S WDR24 103984.5 1 5 2568.1 78.27 HUMAN 1 6.2707 -7.3867 SETRSEGSEYEEIPK-p P48634;S1092-p SETRSEGSEYEEIPK 0.285328406473615 0.101634066156776 0.295666666666667 0.502333333333333 10.2793789331625 13.1162883877593 0.295666666666667 0.502333333333333 0.0937696093434507 0.0487945324818361 2.03029267429447 2.5306393957946 P48634 PRRC2A P48634.S1092.p_PRRC2A P48634_S1092s _1_1_1092_1092 P48634 P48634 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14772.14772.3 12.04 8.47 2.064 3 1 1 0 602.6248 1725.8947 S1092s TMT10 1089 (R) SEGsEYEEIPK (R) S(0.0)EGS(0.99)EY(0.0)EEIPK K:TMT10,s:Phosphorylated S PRRC2A 229315.4 1 20 36.1 882.05 HUMAN 1 10.2794 13.1163 SETTAAHSLVGTPYY-p Q9HC98-2;S240-p SETTAAHSLVGTPYY 0.118727214055873 0.00933164146131915 -0.288666666666667 -0.466666666666667 19.2455055222339 28.6571806866534 -0.288666666666667 -0.466666666666667 0.0118973283525075 0.00136232877965407 -3.71886601004621 -6.0247545891473 Q9HC98 NEK6 Q9HC98.2.S240.p_NEK6 Q9HC98-2_S240s_1_1_240_240 Q9HC98-2 Q9HC98-2|Q9HC98-4|Q9HC98-3 Isoform 2 of Serine/threonine-protein kinase Nek6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22065.22065.4 19.8 15.24 4.348 9 1 1 0 726.5834 2807.3548 S240s M248m TMT10 230 (R) FFSSETTAAHsLVGTPYYmSPER (I) FFS(0.0)S(0.0)ET(0.0)T(0.0)AAHS(0.99)LVGT(0.0)PY(0.0)Y(0.0)M(1.0)S(0.0)PER s:Phosphorylated S,m:Oxidized methionine NEK6 40528.1 8 2 5385.1 19.8 HUMAN 1 -19.2455 -28.6572 SETTKGAYCLSVSDF-p P12931-2;Y193-p SETTKGAYCLSVSDF 0.889554663153291 0.0961248246099933 -0.0203333333333333 0.199666666666667 0.991788147632146 13.4505235362128 -0.0203333333333333 0.199666666666667 0.795831610261141 0.0451801477025787 -0.271817300403093 2.59109368447842 P12931 SRC P12931.2.Y193.p_SRC P12931-2_Y193y _1_1_193_193 P12931-2 P12931-2 Isoform 2 of Proto-oncogene tyrosine-protein kinase Src GG20160819_MSz_CCLE_T4D7_pY_Injection_01.24001.24001.3 17.94 17.94 7.552 3 1 1 0 695.6639 2005.0101 Y193y TMT10 191 (K) GAyCLSVSDFDNAK (G) GAY(0.99)CLS(0.0)VS(0.0)DFDNAK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y SRC 61101 2 7 4.2 124.38 HUMAN 1 -0.9918 13.4505 SETVDQNSDSDEMLA-p P46100;S729-p SETVDQNSDSDEMLA 0.707285047480196 0.686159031854962 0.0516666666666667 -0.0526666666666666 2.82805253272966 2.23912007603259 0.0516666666666667 -0.0526666666666667 0.521428478121115 0.597156264147145 0.685266074953206 -0.561060927014083 P46100 ATRX P46100.S729.p_ATRX P46100_S729s _1_1_729_729 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27764.27764.2 17.97 17.33 1.242 4 1 1 0 1331.1428 2581.3067 S729s TMT10 721 (K) QSETVDQNsDSDEMLAILK (E) Q(0.0)S(0.0)ET(0.0)VDQN(0.0)S(0.99)DS(0.0)DEM(0.0)LAILK K:TMT10,s:Phosphorylated S ATRX 285034.2 10 17 18.1 1035.36 HUMAN 1 2.8281 -2.2391 SEVKRIRSILDVSMG-p Q03169;S632-p SEVKRIRSILDVSMG 0.369489108717469 0.126516872107044 -0.144666666666667 0.158 8.01989189567064 11.8359235021319 -0.144666666666667 0.158 0.15776505399959 0.0655250935691107 -1.6386111594905 2.30213515542554 Q03169 TNFAIP2 Q03169.S632.p_TNFAIP2 Q03169_S632s _1_1_632_632 Q03169 Q03169 Tumor necrosis factor alpha-induced protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.28582.28582.4 20.25 20.25 3.758 4 1 1 0 717.3929 2786.58 S632s Hydrogen 630 (R) IRsILDVSMGAQEPSRPLFSLIK (V) IRS(0.99)ILDVS(0.0)MGAQEPS(0.0)RPLFS(0.0)LIK K:TMT10-Lys-Only,s:Phosphorylated S TNFAIP2 73059.4 4 3 1938.1 106.12 HUMAN 1 -8.0199 11.8359 SEVNAILSPRSESGG-p Q8TB72;S82-p SEVNAILSPRSESGG 0.90916953958039 0.110833927115115 0.0236666666666667 0.169333333333333 0.812631940724999 12.6117323422869 0.0236666666666667 0.169333333333333 0.829348008110752 0.0548058308224969 0.226195405103367 2.44004164142777 Q8TB72 PUM2 Q8TB72.S82.p_PUM2 Q8TB72_S82s _1_1_82_82 Q8TB72 Q8TB72|Q8TB72-3|Q8TB72-4|Q8TB72-2|A0A0A0MR59 Pumilio homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14597.14597.3 16.57 16.57 5.339 3 1 1 0 727.0213 2099.0831 S82s TMT10 67 (R) SGQGFHGNSEVNAILsPR (S) S(0.0)GQGFHGNS(0.0)EVNAILS(0.99)PR s:Phosphorylated S PUM2 114784.2 1 1 944.1 197.75 HUMAN 1 0.8126 12.6117 SEVNSVLSPRSESGG-p Q5T1Z8;S245-p SEVNSVLSPRSESGG 0.801789763948685 0.0769706679382071 -0.036 -0.203666666666667 1.84775252786049 14.7754898331328 -0.036 -0.203666666666667 0.653468634908285 0.0333005201117696 -0.474815388360011 -2.83463335232329 Q5T1Z8 NotFound Q5T1Z8.S245.p_NotFound Q5T1Z8_S245s _1_1_245_245 Q5T1Z8 Q5T1Z8|Q5T1Z4|Q14671-3|Q14671-2 Pumilio homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13393.13393.3 20.48 20.48 1.144 4 1 1 0 807.0747 2339.2418 S245s TMT10 229 (R) RPGQSFHVNSEVNSVLsPR (S) RPGQS(0.0)FHVNS(0.0)EVNS(0.0)VLS(0.99)PR s:Phosphorylated S PUM1 130847.9 4 7 720.1 237.18 HUMAN 1 -1.8478 -14.7755 SEVRSVASNQSEMEF-p Q8N163;S678-p SEVRSVASNQSEMEF 0.736579803240874 0.0120284235378374 -0.0466666666666667 0.427333333333333 2.51665197006661 26.8153806522893 -0.0466666666666667 0.427333333333333 0.560189291937144 0.00208190992108975 -0.62040480330462 5.51120570680388 Q8N163 CCAR2 Q8N163.S678.p_CCAR2 Q8N163_S678s_1_1_678_678 Q8N163 Q8N163|Q8N163-2|G3V119|A0A087X2B6 Cell cycle and apoptosis regulator protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19685.19685.3 18.06 18.06 2.203 5 1 1 0 890.4127 2573.2628 S678s M691m TMT10 675 (R) SVAsNQSEMEFSSLQDmPK (E) S(0.0)VAS(0.99)NQS(0.0)EM(0.0)EFS(0.0)S(0.0)LQDM(0.99)PK K:TMT10,s:Phosphorylated S,m:Oxidized methionine CCAR2 103527.3 17 6 891.1 204.52 HUMAN 1 -2.5167 26.8154 SEVSRNESLESPMGE-p O95210;S145-p SEVSRNESLESPMGE 0.558908100806178 0.209652597955105 0.101 -0.129333333333333 4.66191267960791 8.92538978509999 0.101 -0.129333333333333 0.341828864249717 0.128074014123891 1.04172083106802 -1.79480761354991 O95210 STBD1 O95210.S145.p_STBD1 O95210_S145s _1_1_145_145 O95210 O95210 Starch-binding domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23124.23124.3 11.74 11.74 1.298 6 1 1 0 1029.1493 3005.4715 S145s TMT10 136 (R) SYSEVSRNEsLESPMGEWGFQK (G) S(0.0)Y(0.0)S(0.0)EVS(0.0)RNES(0.99)LES(0.0)PMGEWGFQK K:TMT10,s:Phosphorylated S STBD1 39234.8 1 1 4889.1 25.41 HUMAN 1 4.6619 -8.9254 SEVTPDQSKPEN___-p O43482;S225-p SEVTPDQSKPEN___ 0.572779506907362 0.0189905361404552 -0.075 -0.345666666666667 4.45410252000309 23.6749470553025 -0.075 -0.345666666666667 0.358583042668994 0.00429047419709987 -1.00299587754767 -4.71034449355933 O43482 OIP5 O43482.S225.p_OIP5 O43482_S225s _1_1_225_225 O43482 O43482 Protein Mis18-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19787.19787.3 15.12 15.12 3.237 3 1 1 0 699.0296 2015.1061 S225s TMT10 216 (K) ILSEVTPDQsKPEN (-) ILS(0.0)EVT(0.0)PDQS(0.99)KPEN K:TMT10,s:Phosphorylated S OIP5 25204.5 2 5 2455.1 82.73 HUMAN 1 -4.4541 -23.6749 SEVTTPDSDVGEDEN-p Q8TC07-2;S623-p SEVTTPDSDVGEDEN 0.458939795114556 0.920501077507358 0.155666666666667 0.01 6.23899730961244 0.506061037821007 0.155666666666667 0.01 0.237738911009534 0.890007970940465 1.32702940501655 0.144921116592681 Q8TC07 TBC1D15 Q8TC07.2.S623.p_TBC1D15 Q8TC07-2_S623s _1_1_623_623 Q8TC07-2 Q8TC07|Q8TC07-3|Q8TC07-2 Isoform 2 of TBC1 domain family member 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37272.37272.4 40.91 32.53 1.123 11 1 1 0 1489.4484 5874.8197 S623s TMT10 602 (K) ELPQAVCEILGLQGSEVTTPDsDVGEDENVVMTPCPTSAFQSNALPTLSASGAR (N) ELPQAVCEILGLQGS(0.0)EVT(0.0)T(0.0)PDS(0.99)DVGEDENVVMT(0.0)PCPT(0.0)S(0.0)AFQS(0.0)NALPT(0.0)LS(0.0)AS(0.0)GAR C:Carbamidomethylation,s:Phosphorylated S TBC1D15 78306.6 3 8 1180.1 169.17 HUMAN 1 6.239 0.5061 SEWRPFGYPRRRRPL-p Q9Y276;Y181-p SEWRPFGYPRRRRPL 0.327023352325424 0.0129515201579319 -0.151333333333333 0.474666666666667 9.08412374204871 26.2853020967244 -0.151333333333333 0.474666666666667 0.123477442534991 0.0023521758695416 -1.82292623062488 5.36968900383968 Q9Y276 BCS1L Q9Y276.Y181.p_BCS1L Q9Y276_Y181y _1_1_181_181 Q9Y276 Q9Y276 Mitochondrial chaperone BCS1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.28889.28976.3 27.12 27.12 5.809 5 1 1 0 809.392 2346.1902 Y181y TMT10 166 (K) TVMYTAVGSEWRPFGyPR (R) T(0.0)VMY(0.0)T(0.0)AVGS(0.0)EWRPFGY(0.99)PR y:Phosphorylated Y BCS1L 47704.5 6 1 43.1 48.05 HUMAN 1 -9.0841 26.2853 SFAHLLPSPEPSPEG-p Q8IY67-2;S707-p SFAHLLPSPEPSPEG 0.15104190066403 0.467638854068137 0.272333333333333 -0.087 16.5477983012854 4.40029856419926 0.272333333333333 -0.087 0.0221421694423843 0.363053095120109 3.17409280473038 -0.992733787464386 Q8IY67 RAVER1 Q8IY67.2.S707.p_RAVER1 Q8IY67-2_S707s _1_1_707_707 Q8IY67-2 E9PAU2|Q8IY67-2|A0A087WZ13 Isoform 2 of Ribonucleoprotein PTB-binding 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22873.22883.5 22.62 19 1.378 9 1 1 0 851.0161 4171.0925 S707s TMT10 700 (R) SFAHLLPsPEPSPEGSYVGQHSQGLGGHYADSYLK (R) S(0.0)FAHLLPS(0.99)PEPS(0.0)PEGS(0.0)Y(0.0)VGQHS(0.0)QGLGGHY(0.0)ADS(0.0)Y(0.0)LK K:TMT10,s:Phosphorylated S RAVER1 78371.6 1 10 785.1 225.39 HUMAN 1 16.5478 -4.4003 SFASDPKYATPQVIQ-p C9J1X3;Y859-p SFASDPKYATPQVIQ 0.911329212235474 0.0660980962173286 0.0363333333333333 -0.537666666666667 0.791857399733366 15.6905485755568 0.0363333333333334 -0.537666666666667 0.83332471033932 0.0269739869119449 0.220820983638954 -3.00692139289081 C9J1X3 TNK2 C9J1X3.Y859.p_TNK2 C9J1X3_Y859y _1_1_859_859 C9J1X3 Q07912-3|C9J1X3 Activated CDC42 kinase 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.16399.16499.2 20.31 20.31 5.663 2 1 1 0 853.946 1626.9165 Y859y TMT10 859 (K) yATPQVIQAPGPR (A) Y(0.99)AT(0.0)PQVIQAPGPR y:Phosphorylated Y TNK2 115861.1 6 4 12.1 93.88 HUMAN 1 0.7919 -15.6905 SFASDSSSKSSSPAS-p Q8N4U5;S46-p SFASDSSSKSSSPAS 0.312808396386622 0.0011418699812441 0.337333333333333 1.828 9.44310916022858 48.8611872627261 0.337333333333333 1.828 0.113681313785469 1.29981418970518e-05 1.88509949968732 14.9369296675312 Q8N4U5 TCP11L2 Q8N4U5.S46.p_TCP11L2 Q8N4U5_S46s _1_1_46_46 Q8N4U5 Q8N4U5|G3V1Z2|Q8N4U5-2|F8VU20 T-complex protein 11-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8382.8382.3 12.56 12.56 1.142 5 1 1 0 527.9244 1501.7899 S46s TMT10 38 (R) QSFASDSSsK (S) QS(0.0)FAS(0.0)DS(0.0)S(0.0)S(0.99)K K:TMT10,s:Phosphorylated S TCP11L2 58546.7 2 1 3493.1 49.81 HUMAN 1 9.4431 48.8612 SFDERQPYAHMNGGR-p P08069;Y1346-p SFDERQPYAHMNGGR 0.0417571234602878 0.333288220646353 0.496333333333333 -0.244 30.7715529991778 6.32389733836824 0.496333333333333 -0.244 0.00083722984250421 0.233136496723703 6.67034851370253 -1.34172910685995 P08069 IGF1R P08069.Y1346.p_IGF1R P08069_Y1346y _1_1_1346_1346 P08069 P08069|C9J5X1 Insulin-like growth factor 1 receptor GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8379.8390.3 8.77 5.67 6.8 2 1 1 0 715.6573 2064.9871 Y1346y TMT10 1338 (R) ASFDERQPyAHMNGGR (K) AS(0.0)FDERQPY(0.99)AHMNGGR y:Phosphorylated Y IGF1R 157300.7 2 2 129.1 24.36 HUMAN 1 30.7716 -6.3239 SFDKLMHSPAGRSVF-p P49795;S97-p SFDKLMHSPAGRSVF 0.718244338748863 0.934682850698998 0.0593333333333333 -0.00999999999999997 2.71131230797718 0.413941275544603 0.0593333333333333 -0.00999999999999997 0.535634780253709 0.909087889786769 0.661140820181357 -0.119624788889186 P49795 RGS19 P49795.S97.p_RGS19 P49795_S97s _1_1_97_97 P49795 P49795 Regulator of G-protein signaling 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5880.5880.2 11.32 6.5 99 1 1 1 0 589.2911 1097.6087 S97s TMT10 94 (K) LMHsPAGR (S) LMHS(1.0)PAGR s:Phosphorylated S RGS19 25262.8 3 2 3840.1 41.87 HUMAN 1 2.7113 -0.4139 SFEDRVGTIKSKVVG-p O43399-2;T153-p SFEDRVGTIKSKVVG 0.5704143009409 0.165521480584948 0.116333333333333 0.172 4.48635879191015 10.2725804532638 0.116333333333333 0.172 0.355929611705546 0.0939165119769937 1.00902865599069 2.0282637975024 O43399 TPD52L2 O43399.2.T153.p_TPD52L2 O43399-2_T153t _1_1_153_153 O43399-2 O43399-7|O43399-5|O43399-3|O43399-4|O43399-2|O43399-6|A0A087WZ51 Isoform 2 of Tumor protein D54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13054.13054.3 9.08 9.08 3.882 2 1 1 0 563.972 1609.9314 T153t TMT10 146 (K) SFEDRVGtIK (S) S(0.0)FEDRVGT(0.99)IK K:TMT10,t:Phosphorylated T TPD52L2 19957.8 2 17 793.1 224.4 HUMAN 1 4.4864 10.2726 SFEILRGSDGEDSAS-p Q14674;S1508-p SFEILRGSDGEDSAS 0.699877948209552 0.00908580846191256 -0.0603333333333333 -0.504333333333333 2.91193632550563 28.8834601415403 -0.0603333333333333 -0.504333333333333 0.511453750268648 0.0012931651312889 -0.702468103793511 -6.09029319567474 Q14674 ESPL1 Q14674.S1508.p_ESPL1 Q14674_S1508s _1_1_1508_1508 Q14674 Q14674|Q14674-2 Separin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21598.21598.3 20.49 20.49 4.052 5 1 1 0 1122.8677 3286.6228 S1508s TMT10 1507 (R) GsDGEDSASGGKTPAPGPEAASGEWELLR (L) GS(0.99)DGEDS(0.0)AS(0.0)GGKT(0.0)PAPGPEAAS(0.0)GEWELLR K:TMT10,s:Phosphorylated S ESPL1 236708.6 10 4 895.1 204.23 HUMAN 1 -2.9119 -28.8835 SFEKAKESWEMNSEE-p Q02790;S258-p SFEKAKESWEMNSEE 0.162678281037978 0.25993335179648 0.277 0.181333333333333 15.7939910979482 7.70860127559485 0.277 0.181333333333333 0.0263390975165934 0.16948835806514 3.02873359621562 1.58408326230922 Q02790 FKBP4 Q02790.S258.p_FKBP4 Q02790_S258s _1_1_258_258 Q02790 Q02790 Peptidyl-prolyl cis-trans isomerase FKBP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20982.20982.5 18.28 18.28 3.002 4 1 1 0 673.36 3282.8061 S258s TMT10 255 (K) AKEsWEMNSEEKLEQSTIVK (E) AKES(0.99)WEMNS(0.0)EEKLEQS(0.0)T(0.0)IVK K:TMT10,s:Phosphorylated S FKBP4 52088.9 4 7 706.1 239.22 HUMAN 1 15.794 7.7086 SFEKMAPSFDKDSNL-p Q6ZV73;S417-p SFEKMAPSFDKDSNL 0.254504068269259 0.72844195887989 -0.177 0.04 11.3111534188328 1.89472069985768 -0.177 0.04 0.0739408873442063 0.646439565989212 -2.21071322137168 0.48530358980681 Q6ZV73 FGD6 Q6ZV73.S417.p_FGD6 Q6ZV73_S417s _1_1_417_417 Q6ZV73 Q6ZV73|Q6ZV73-2|F8VY01 FYVE, RhoGEF and PH domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27627.27627.4 19.3 19.3 1.168 11 1 1 0 1041.4812 4082.9575 S417s TMT10 414 (K) MAPsFDKDSNLSSDSTTVDGSSMSLAVDEGTGFIR (C) MAPS(0.99)FDKDS(0.0)NLS(0.0)S(0.0)DS(0.0)T(0.0)T(0.0)VDGS(0.0)S(0.0)MS(0.0)LAVDEGT(0.0)GFIR K:TMT10,s:Phosphorylated S FGD6 162696.3 2 4 630.1 257.05 HUMAN 1 -11.3112 1.8947 SFELPPYTPPPILSP-p A0A1C7CYX1;T655-p SFELPPYTPPPILSP 0.336200474871642 0.0533763971173213 0.149333333333333 0.246333333333333 8.82405654915011 16.9721801118074 0.149333333333333 0.246333333333333 0.131097480443665 0.0200808452262094 1.77790673386191 3.2546824817882 A0A1C7CYX1 NotFound A0A1C7CYX1.T655.p_NotFound A0A1C7CYX1_T655t _1_1_655_655 A0A1C7CYX1 A0A1C7CYX1|Q6PJG2 ELM2 and SANT domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.33189.33387.3 23.36 23.36 4.03 4 1 1 0 740.3954 2139.2051 T655t TMT10 648 (R) SFELPPYtPPPILSPVR (E) S(0.0)FELPPY(0.0)T(0.99)PPPILS(0.0)PVR t:Phosphorylated T ELMSAN1 121244.8 5 4 548.1 275.48 HUMAN 1 8.8241 16.9722 SFFKTLVSPNKAETK-p O75363;S296-p SFFKTLVSPNKAETK 0.23797684518109 0.0286113715981068 -0.174333333333333 -0.313 11.9348598319277 20.8971273417038 -0.174333333333333 -0.313 0.06404924530601 0.00813368344028747 -2.32078585285036 -4.07015524847759 O75363 BCAS1 O75363.S296.p_BCAS1 O75363_S296s _1_1_296_296 O75363 O75363-2|G3XAF7 Breast carcinoma-amplified sequence 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12555.12555.2 7.17 7.17 2.11 2 1 1 0 648.8724 1216.7665 S296s TMT10 293 (K) TLVsPNK (A) T(0.0)LVS(0.99)PNK K:TMT10,s:Phosphorylated S BCAS1 61993.1 1 1 3655.1 46.01 HUMAN 1 -11.9349 -20.8971 SFFSDRGSGSRGRFD-p A0A0D9SF53;S90-p SFFSDRGSGSRGRFD 0.884092624795392 0.0329047388127223 -0.0243333333333333 -0.318666666666667 1.0552801129813 19.9997594891504 -0.0243333333333333 -0.318666666666667 0.784281532348572 0.0100005538120318 -0.287687953431058 -3.87527255605181 A0A0D9SF53 NotFound A0A0D9SF53.S90.p_NotFound A0A0D9SF53_S90s _1_1_90_90 A0A0D9SF53 A0A0D9SF53|O00571|A0A0D9SG12|O00571-2|A0A0D9SFB3|B4DLA0|A0A087WX09 ATP-dependent RNA helicase DDX3X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9712.9712.2 8.25 8.25 1.274 5 1 1 0 799.8619 1518.7498 S90s TMT10 82 (K) SSFFSDRGsGSR (G) S(0.0)S(0.0)FFS(0.0)DRGS(0.99)GS(0.0)R s:Phosphorylated S DDX3X 82160.2 4 6 1042.1 184.93 HUMAN 1 -1.0553 -19.9998 SFGDPQLSPEARPRC-p O95425-2;S270-p SFGDPQLSPEARPRC 0.49647751130558 0.0154308676321095 0.114 0.375666666666667 5.60027605644819 25.0597724809701 0.114 0.375666666666667 0.275405363815525 0.00311905298136234 1.21301348714277 5.05260530509566 O95425 SVIL O95425.2.S270.p_SVIL O95425-2_S270s _1_1_270_270 O95425-2 O95425-3|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12820.12820.3 16.9 11.99 3.104 3 1 1 0 684.004 1970.0293 S270s TMT10 261 (R) SPSFGDPQLsPEARPR (C) S(0.0)PS(0.0)FGDPQLS(0.99)PEARPR s:Phosphorylated S SVIL 202384.1 4 7 406.2 324.74 HUMAN 1 5.6003 25.0598 SFGGGRGSRGSAGGH-p Q15056;S21-p SFGGGRGSRGSAGGH 0.785321801685938 0.935835815498169 0.112333333333333 -0.0196666666666667 2.0218699190715 0.40672953400737 0.112333333333333 -0.0196666666666667 0.627787997213805 0.910598743275321 0.513639861453734 -0.11762579271386 Q15056 EIF4H Q15056.S21.p_EIF4H Q15056_S21s _1_1_21_21 Q15056 Q15056|Q15056-2 Eukaryotic translation initiation factor 4H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6531.6531.3 8.31 8.31 8.308 4 1 1 0 504.2386 1430.7338 S21s TMT10 11 (R) AYSSFGGGRGsR (G) AY(0.0)S(0.0)S(0.0)FGGGRGS(0.99)R s:Phosphorylated S EIF4H 27441.6 2 2 2065.1 99.65 HUMAN 1 2.0219 -0.4067 SFGLKIPSEAGGANG-p Q86UQ4-4;S4378-p SFGLKIPSEAGGANG 0.957246455101486 0.334345117440773 -0.008 0.147333333333333 0.371479994689718 6.30508208643421 -0.008 0.147333333333333 0.918019699160111 0.234148721806705 -0.107825026525566 1.33840099051228 Q86UQ4 ABCA13 Q86UQ4.4.S4378.p_ABCA13 Q86UQ4-4_S4378s_1_1_4378_4378 Q86UQ4-4 Q86UQ4|A0A0A0MT16|Q86UQ4-3|Q86UQ4-5|Q86UQ4-7|Q86UQ4-6|Q86UQ4-4 Isoform 4 of ATP-binding cassette sub-family A member 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14680.14680.3 7.42 1.36 0 3 1 1 0 1018.2166 2971.6518 S4378s N4386n Hydrogen 4365 (K) PRLGGWSFGLKIPsEAGGANGnISK (P) PRLGGWS(0.0)FGLKIPS(0.99)EAGGAN(0.50)GN(0.50)IS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated ABCA13 580971.2 1 1 1112.3 175.87 HUMAN 1 -0.3715 6.3051 SFGPSPVSGGECSPP-p Q5JRA6;S1673-p SFGPSPVSGGECSPP 0.366079105130034 0.948686173963343 0.1285 -0.00666666666666664 8.1002215060934 0.327301093661217 0.1285 -0.00666666666666664 0.15487376256063 0.927405977210826 1.65254201729626 -0.0954235395517054 Q5JRA6 MIA3 Q5JRA6.S1673.p_MIA3 Q5JRA6_S1673sS1678s_2_2_1673_1678 Q5JRA6 Q5JRA6|Q5JRA6-2|Q5JRA6-4 Transport and Golgi organization protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23429.23429.5 17.95 17.95 2 8 2 2 0 912.857 4400.3095 S1673s S1678s TMT10 1658 (R) RGPLSQNGSFGPSPVsGGECsPPLTVEPPVRPLSATLNRR (D) RGPLS(0.0)QNGS(0.0)FGPS(0.0)PVS(0.99)GGECS(0.99)PPLT(0.0)VEPPVRPLS(0.0)AT(0.0)LNRR C:Carbamidomethylation,s:Phosphorylated S MIA3 214383.2 11 15 378.1 336.1 HUMAN 2 8.1002 -0.3273 SFGSLTDSSEEALEG-p Q969H4;S572-p SFGSLTDSSEEALEG 0.367705250238363 0.149094719080599 0.125333333333333 0.153666666666667 8.06118046969093 10.8795154989156 0.125333333333333 0.153666666666667 0.156272281623105 0.0816673474775831 1.64577216003119 2.13406457582427 Q969H4 CNKSR1 Q969H4.S572.p_CNKSR1 Q969H4_S572s _1_1_572_572 Q969H4 Q969H4|Q969H4-2|G3V160 Connector enhancer of kinase suppressor of ras 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26835.26835.2 12.69 12.69 1.128 6 1 1 0 1163.0259 2245.0856 S572s TMT10 564 (R) TSFGSLTDsSEEALEGMVR (G) T(0.0)S(0.0)FGS(0.0)LT(0.0)DS(0.99)S(0.0)EEALEGMVR s:Phosphorylated S CNKSR1 80560.2 3 8 1912.1 107.86 HUMAN 1 8.0612 10.8795 SFGYFIRSPEKREPI-p Q8TEP8-3;S612-p SFGYFIRSPEKREPI 0.622409350359126 0.00714231278100688 -0.172666666666667 -0.719666666666667 3.82648114502319 30.7201368094338 -0.172666666666667 -0.719666666666667 0.414335252456945 0.000847200725595845 -0.883812555414516 -6.64338997290473 Q8TEP8 NotFound Q8TEP8.3.S612.p_NotFound Q8TEP8-3_S612s _1_1_612_612 Q8TEP8-3 Q8TEP8-3 Isoform 3 of Centrosomal protein of 192 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14220.14220.5 12.31 12.31 12.309 3 1 1 0 456.4516 2198.2599 S612s TMT10 603 (K) RPSFGYFIRsPEKR (E) RPS(0.0)FGY(0.0)FIRS(0.99)PEKR K:TMT10,s:Phosphorylated S CEP192 281787.5 1 8 491.1 293.99 HUMAN 1 -3.8265 -30.7201 SFGYLDRSPSACKRD-p P78524;S105-p SFGYLDRSPSACKRD 0.395304354889455 0.00205530259496525 -0.129 -0.984333333333333 7.43718832798142 41.8549089904793 -0.129 -0.984333333333333 0.180418541305454 6.52392712211729e-05 -1.53734430249469 -10.9979719182644 P78524 ST5 P78524.S105.p_ST5 P78524_S105s _1_1_105_105 P78524 P78524 Suppression of tumorigenicity 5 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12308.12308.4 14.22 14.22 1.503 5 1 1 0 589.2994 2274.2065 S105s TMT10 96 (K) TASFGYLDRsPSACKR (D) T(0.0)AS(0.0)FGY(0.0)LDRS(0.99)PS(0.0)ACKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ST5 127680.5 1 1 2234.1 92.43 HUMAN 1 -7.4372 -41.8549 SFHFKSGSLENVPNV-p P53004;S237-p SFHFKSGSLENVPNV 0.566468680637233 0.298626723945236 0.0776666666666667 0.122666666666667 4.54745772285266 6.92940098714089 0.0776666666666666 0.122666666666667 0.350957257524364 0.202796241264237 1.02043337029105 1.4482534030235 P53004 BLVRA P53004.S237.p_BLVRA P53004_S237s _1_1_237_237 P53004 P53004 Biliverdin reductase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16959.16959.4 10.08 10.08 1.108 2 1 1 0 488.7622 1872.0591 S237s TMT10 235 (K) SGsLENVPNVGVNK (N) S(0.0)GS(0.99)LENVPNVGVNK K:TMT10,s:Phosphorylated S BLVRA 33713.1 2 2 4885.1 25.47 HUMAN 1 4.5475 6.9294 SFISPEKSRKMLPTP-p Q96RY5;S1175-p SFISPEKSRKMLPTP 0.156281344285149 0.235718493770492 -0.551333333333333 -0.268 16.1803270887666 8.26384179172891 -0.551333333333333 -0.268 0.0240972393356193 0.149147445973056 -3.10289196962858 -1.68035059201096 Q96RY5 CRAMP1 Q96RY5.S1175.p_CRAMP1 Q96RY5_S1175sT1181t_2_2_1175_1181 Q96RY5 Q96RY5 Protein cramped-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20335.20335.4 7.22 3.86 1.594 8 2 2 0 877.1808 3327.8459 S1175s M1178m T1181t N1186n N1200n TMT10 1175 (K) sRKmLPtPIGTnSGTSLLGPSLLDGnSR (D) S(0.99)RKM(1.0)LPT(0.99)PIGT(0.0)N(1.0)S(0.0)GT(0.0)S(0.0)LLGPS(0.0)LLDGN(1.0)S(0.0)R K:TMT10,s:Phosphorylated S,m:Oxidized methionine,t:Phosphorylated T,n:Deamidated CRAMP1 135914.1 2 14 647.1 254.68 HUMAN 1 -16.1803 -8.2638 SFIVRLDSQKHIDFS-p P46781;S153-p SFIVRLDSQKHIDFS 0.356784883442257 0.0734693602419909 -0.285333333333333 0.253 8.32206335456377 15.0551863318108 -0.285333333333333 0.253 0.147161316562308 0.0312234844059766 -1.69098895943753 2.88691549687919 P46781 RPS9 P46781.S153.p_RPS9 P46781_S153s _1_1_153_153 P46781 P46781 40S ribosomal protein S9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29552.29552.3 13.57 13.57 2.45 2 1 1 0 794.4509 2301.3695 S153s TMT10 140 (K) QVVNIPSFIVRLDsQK (H) QVVNIPS(0.0)FIVRLDS(0.99)QK K:TMT10,s:Phosphorylated S RPS9 22648.1 3 3 3125.1 60.11 HUMAN 1 -8.3221 15.0552 SFKKQEKTPKTPKGP-p P06748;T234-p SFKKQEKTPKTPKGP 0.10854647135141 0.0273337882990078 -0.31 -0.567333333333333 20.2326201206753 21.206920801223 -0.31 -0.567333333333333 0.00947846450189756 0.00757369688687811 -3.92905195048248 -4.13871563293868 P06748 NPM1 P06748.T234.p_NPM1 P06748_T234tT237t_2_2_234_237 P06748 P06748|P06748-2|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14389.14389.5 10.4 7.41 1.711 4 2 2 0 532.8964 2500.5156 T234t T237t TMT10 234 (K) tPKtPKGPSSVEDIK (A) T(0.99)PKT(0.99)PKGPS(0.0)S(0.0)VEDIK K:TMT10,t:Phosphorylated T NPM1 32745.6 11 27 78.1 640.75 HUMAN 1 -20.2326 -21.2069 SFLARSRSAVTLPRN-p Q3KQU3;S313-p SFLARSRSAVTLPRN 0.182722695333724 0.747497134073955 0.257333333333333 0.038 14.5175833929654 1.74425188292496 0.257333333333333 0.038 0.0353379751253666 0.66922909173636 2.78845365520032 0.451339133254035 Q3KQU3 MAP7D1 Q3KQU3.S313.p_MAP7D1 Q3KQU3_S313s _1_1_313_313 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8275.8275.2 8.23 5.8 4.963 2 1 1 0 412.2078 743.441 S313s Hydrogen 313 (R) sAVTLPR (N) S(0.99)AVT(0.0)LPR s:Phosphorylated S MAP7D1 93160.6 5 10 160.1 495.56 HUMAN 1 14.5176 1.7443 SFLDQDQSPPRFYSG-p A7KAX9;S1203-p SFLDQDQSPPRFYSG 0.621617461371381 0.876861734043744 0.0663333333333333 0.0156666666666667 3.83988989039818 0.801936692342688 0.0663333333333333 0.0156666666666667 0.413057974394124 0.831392937147556 0.886397994695424 0.223409323323878 A7KAX9 ARHGAP32 A7KAX9.S1203.p_ARHGAP32 A7KAX9_S1203s _1_1_1203_1203 A7KAX9 A7KAX9|A7KAX9-2 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23103.23103.3 10.85 10.85 1.108 4 1 1 0 743.3444 2148.0593 S1203s TMT10 1190 (K) NSMPTVSFLDQDQsPPR (F) NS(0.0)MPT(0.0)VS(0.0)FLDQDQS(0.99)PPR s:Phosphorylated S ARHGAP32 232236.5 7 20 159.1 497.4 HUMAN 1 3.8399 0.8019 SFLKAVPSQKRT___-p P31949;S101-p SFLKAVPSQKRT___ 0.0552688318450056 0.398683806220813 0.436333333333333 -0.140666666666667 27.3979352698051 5.30971470539473 0.436333333333333 -0.140666666666667 0.00182056618956206 0.294461506365678 5.67787905678911 -1.16027717729117 P31949 S100A11 P31949.S101.p_S100A11 P31949_S101s _1_1_101_101 P31949 P31949 Protein S100-A11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.4762.4762.3 7.89 4.25 99 1 1 1 0 441.9232 1243.7887 S101s TMT10 98 (K) AVPsQKR (T) AVPS(1.0)QKR K:TMT10,s:Phosphorylated S S100A11 11854.4 2 3 2333.1 87.44 HUMAN 1 27.3979 -5.3097 SFLSEPSSPGRTKTT-p Q69YN4;S1579-p SFLSEPSSPGRTKTT 0.801313682662727 0.944232842957325 -0.038 0.00933333333333335 1.85219032644409 0.357916372716071 -0.038 0.00933333333333336 0.652801234985472 0.920891284477294 -0.475813881315135 0.104022101779692 Q69YN4 KIAA1429 Q69YN4.S1579.p_KIAA1429 Q69YN4_S1578sS1579s_2_2_1578_1579 Q69YN4 Q69YN4|Q69YN4-3 Protein virilizer homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16310.16310.3 7.06 7.06 7.063 5 2 2 0 670.9958 1851.0376 S1578s S1579s TMT10 1572 (R) SFLSEPssPGRTK (T) S(0.0)FLS(0.0)EPS(0.99)S(0.99)PGRT(0.0)K K:TMT10,s:Phosphorylated S VIRMA 203675.9 1 11 1178.1 169.26 HUMAN 1 -1.8522 0.3579 SFMSGADSFDEMNAE-p O14777;S242-p SFMSGADSFDEMNAE 0.560135693219576 0.708334710064715 0.0856666666666667 -0.0453333333333333 4.64099243254851 2.05893827665835 0.0856666666666667 -0.0453333333333333 0.343479448367927 0.622452438036545 1.03783718436915 -0.521753900177829 O14777 NDC80 O14777.S242.p_NDC80 O14777_S242s _1_1_242_242 O14777 O14777 Kinetochore protein NDC80 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27512.27512.3 18.28 17.57 2.97 5 1 1 0 1028.7695 3004.3415 S242s TMT10 232 (K) CYESFMSGADsFDEMNAELQSK (L) CY(0.0)ES(0.0)FMS(0.0)GADS(0.99)FDEMNAELQS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NDC80 74424.8 1 1 5547.1 18.28 HUMAN 1 4.641 -2.0589 SFPGSSESPLSSKRP-p Q15911;S1204-p SFPGSSESPLSSKRP 0.796323249979386 0.00484987545703216 -0.0583333333333333 -0.643 1.90760915932651 33.8050588321516 -0.0583333333333333 -0.643 0.64452398567525 0.00041638408039691 -0.488242800731801 -7.66450411862912 Q15911 ZFHX3 Q15911.S1204.p_ZFHX3 Q15911_S1204s _1_1_1204_1204 Q15911 Q15911|Q15911-2 Zinc finger homeobox protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17617.17617.3 13.19 13.19 3.203 6 1 1 0 706.3727 2037.1381 S1204s TMT10 1195 (K) RISFPGSSEsPLSSK (R) RIS(0.0)FPGS(0.0)S(0.0)ES(0.99)PLS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ZFHX3 409090.1 3 6 529.1 281.73 HUMAN 1 -1.9076 -33.8051 SFPSPSISPR_____-p Q9ULD2;S1268-p SFPSPSISPR_____ 0.0868192866229433 0.194735073510352 -0.340666666666667 -0.163 22.6550376965119 9.34167698648188 -0.340666666666667 -0.163 0.00542620541393396 0.116367660008819 -4.47334879668053 -1.86682694451851 Q9ULD2 MTUS1 Q9ULD2.S1268.p_MTUS1 Q9ULD2_S1268s _1_1_1268_1268 Q9ULD2 Q9ULD2-2|Q9ULD2-6|Q9ULD2-3|Q9ULD2-7|Q9ULD2-4 Microtubule-associated tumor suppressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14249.14249.2 13.79 11.29 1.108 5 1 1 0 821.3945 1561.8172 S1268s TMT10 1258 (R) NSGSFPSPSIsPR (-) NS(0.0)GS(0.0)FPS(0.0)PS(0.0)IS(0.99)PR s:Phosphorylated S MTUS1 142763.7 2 15 645.1 254.81 HUMAN 1 -22.655 -9.3417 SFPSYLASPAGSRGS-p Q96PE2;S383-p SFPSYLASPAGSRGS 0.625010568942101 0.0259210237700486 0.11 -0.394666666666667 3.79111011752165 21.5717790478328 0.11 -0.394666666666667 0.417723577001954 0.00696341205838155 0.87698343373726 -4.22033573455939 Q96PE2 ARHGEF17 Q96PE2.S383.p_ARHGEF17 Q96PE2_S383s _1_1_383_383 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22765.22765.3 17.82 17.82 3.605 5 1 1 0 583.2923 1667.8954 S383s TMT10 375 (K) VSFPSYLAsPAGSR (G) VS(0.0)FPS(0.0)Y(0.0)LAS(0.99)PAGS(0.0)R s:Phosphorylated S ARHGEF17 223779.6 5 10 30.1 908.19 HUMAN 1 3.7911 -21.5718 SFQSLACSPGLPAAD-p Q96JY6-5;S411-p SFQSLACSPGLPAAD 0.481891116961331 0.0109306351277347 -0.123666666666667 -0.548 5.83363454676619 27.4791882081067 -0.123666666666667 -0.548 0.260997618940109 0.00178682153987856 -1.2548696889633 -5.69230571937976 Q96JY6 PDLIM2 Q96JY6.5.S411.p_PDLIM2 Q96JY6-5_S411s _1_1_411_411 Q96JY6-5 Q96JY6-5|Q96JY6-3|Q96JY6-4 Isoform 5 of PDZ and LIM domain protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19698.19698.3 15.77 15.77 5.698 3 1 1 0 662.6496 1905.969 S411s TMT10 404 (R) SFQSLACsPGLPAADR (L) S(0.0)FQS(0.0)LACS(0.99)PGLPAADR C:Carbamidomethylation,s:Phosphorylated S PDLIM2 63315 2 8 1306.1 155.86 HUMAN 1 -5.8336 -27.4792 SFRDRQRSPIALPVK-p Q8TF01;S211-p SFRDRQRSPIALPVK 0.701611654046682 0.246174730677739 0.0546666666666667 0.128666666666667 2.8935321840798 8.02168956579571 0.0546666666666667 0.128666666666667 0.513625741912586 0.157699764006926 0.698703262303339 1.63840218147449 Q8TF01 PNISR Q8TF01.S211.p_PNISR Q8TF01_S211s _1_1_211_211 Q8TF01 Q8TF01|Q8TF01-2 Arginine/serine-rich protein PNISR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21959.21959.3 20.97 20.97 99 1 1 1 0 823.4713 2388.4267 S211s Hydrogen 211 (R) sPIALPVKQEPPQIDAVK (R) S(1.0)PIALPVKQEPPQIDAVK K:TMT10-Lys-Only,s:Phosphorylated S PNISR 92575.2 38 1 613.1 261.5 HUMAN 1 2.8935 8.0217 SFRERITSEAEDLVA-p P61289-2;S24-p SFRERITSEAEDLVA 0.297330507583042 0.0115864077268657 -0.165666666666667 -0.432 9.91242111554176 27.0804697104799 -0.165666666666667 -0.432 0.102037048647512 0.00195863282644008 -1.96649894834952 -5.58300252077676 P61289 PSME3 P61289.2.S24.p_PSME3 P61289-2_S24s _1_1_24_24 P61289-2 P61289-2|P61289-3|K9J957|A0A087WTV2|B7Z8D3 Isoform 2 of Proteasome activator complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32301.32502.3 15.14 15.14 1.483 2 1 1 0 783.0812 2267.2688 S24s Hydrogen 22 (R) ITsEAEDLVANFFPKK (L) IT(0.0)S(0.99)EAEDLVANFFPKK K:TMT10-Lys-Only,s:Phosphorylated S PSME3 31057.2 9 2 2122.1 96.8 HUMAN 1 -9.9124 -27.0805 SFRGGMGSGGLATGI-p P05783;S60-p SFRGGMGSGGLATGI 0.927873054334042 0.0792603482411338 0.016 0.208666666666667 0.643931808783023 14.6106472533604 0.016 0.208666666666667 0.862197618855421 0.0345887824387237 0.182011885134212 2.80396995840733 P05783 KRT18 P05783.S60.p_KRT18 P05783_S60s _1_1_60_60 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28407.28407.4 23.65 23.65 5.827 4 1 1 0 969.2204 3793.9035 S60s TMT10 56 (R) GGMGsGGLATGIAGGLAGMGGIQNEKETMQSLNDR (L) GGMGS(0.99)GGLAT(0.0)GIAGGLAGMGGIQNEKET(0.0)MQS(0.0)LNDR K:TMT10,s:Phosphorylated S KRT18 48057 45 14 89.1 623.62 HUMAN 1 0.6439 14.6106 SFRRRHNSWSSSSRH-p Q96F86;S161-p SFRRRHNSWSSSSRH 0.921627477279005 0.0825574604132757 0.0446666666666667 -0.246 0.694757098214586 14.348391926883 0.0446666666666666 -0.246 0.852166171873383 0.036741832022122 0.195455499540366 -2.75540826632093 Q96F86 EDC3 Q96F86.S161.p_EDC3 Q96F86_S161s _1_1_161_161 Q96F86 Q96F86 Enhancer of mRNA-decapping protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.2177.2601.2 9.67 9.67 2.785 5 1 1 0 564.2175 1047.4602 S161s Hydrogen 159 (R) HNsWSSSSR (H) HNS(0.99)WS(0.0)S(0.0)S(0.0)S(0.0)R s:Phosphorylated S EDC3 56818.2 2 4 2217.1 93.04 HUMAN 1 0.6948 -14.3484 SFRSGMNSPLRTTPD-p Q9UQR1;S665-p SFRSGMNSPLRTTPD 0.812937085947395 0.393816447395128 0.0623333333333333 0.186 1.72990740842514 5.38057854420179 0.0623333333333333 0.186 0.671443167940352 0.289695764457792 0.448121036971027 1.17311375318076 Q9UQR1 ZNF148 Q9UQR1.S665.p_ZNF148 Q9UQR1_S665s _1_1_665_665 Q9UQR1 Q9UQR1 Zinc finger protein 148 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10096.10096.3 13.03 10.07 2.381 4 1 1 0 647.9997 1862.0206 S665s TMT10 661 (R) SGMNsPLRTTPDK (S) S(0.0)GMNS(0.99)PLRT(0.0)T(0.0)PDK K:TMT10,s:Phosphorylated S ZNF148 89602.2 10 6 975.1 192.87 HUMAN 1 1.7299 5.3806 SFSCGQASATPFTDI-p Q14680;S343-p SFSCGQASATPFTDI 0.237591296850965 0.00404943846968545 -0.188333333333333 -0.825333333333333 11.9639659692867 35.236715897554 -0.188333333333333 -0.825333333333333 0.0636214265840736 0.000299452822052971 -2.32594478457648 -8.18176648759828 Q14680 MELK Q14680.S343.p_MELK Q14680_S343s _1_1_343_343 Q14680 Q14680|Q14680-6|Q14680-7|Q14680-8|Q14680-2|Q14680-5 Maternal embryonic leucine zipper kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27596.27596.3 14.03 14.03 1.209 6 1 1 0 908.8013 2644.4169 S343s TMT10 332 (R) LRLSSFSCGQAsATPFTDIK (S) LRLS(0.0)S(0.0)FS(0.0)CGQAS(0.99)AT(0.0)PFT(0.0)DIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MELK 75553.6 1 2 1543.1 132.89 HUMAN 1 -11.964 -35.2367 SFSDGVPSDSVEAAK-p Q99733-2;S12-p SFSDGVPSDSVEAAK 0.235532008134595 0.885735498521344 0.183333333333333 0.0253333333333333 12.0317116290662 0.740705439894784 0.183333333333333 0.0253333333333333 0.062636695405634 0.843197783040316 2.33796059223815 0.207489870744341 Q99733 NAP1L4 Q99733.2.S12.p_NAP1L4 Q99733-2_S12s_1_1_12_12 Q99733-2 Q99733-2 Isoform 2 of Nucleosome assembly protein 1-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15990.15990.4 7.91 7.91 0 6 1 1 0 786.8681 3063.4907 S12s N23n Acetyl 2 (M) ADHSFSDGVPsDSVEAAKNASnTEK (L) ADHS(0.0)FS(0.0)DGVPS(0.99)DS(0.0)VEAAKN(0.50)AS(0.0)N(0.50)T(0.0)EK K:TMT10,s:Phosphorylated S,n:Deamidated NAP1L4 44306.2 2 3 1403.1 146.36 HUMAN 1 12.0317 0.7407 SFSLTTFSPSGKLVQ-p P25787;S14-p SFSLTTFSPSGKLVQ 0.219245224336186 0.927601724721068 -0.211333333333333 0.0103333333333334 12.6906829465776 0.460876731270222 -0.211333333333333 0.0103333333333334 0.0538185143954536 0.899316013931458 -2.45547616813399 0.132567936506989 P25787 PSMA2 P25787.S14.p_PSMA2 P25787_S14s _1_1_14_14 P25787 P25787|H3BT36 Proteasome subunit alpha type-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26009.26009.2 16.53 16.53 1.139 7 1 1 0 1009.0077 1937.0421 S14s TMT10 5 (R) GYSFSLTTFsPSGK (L) GY(0.0)S(0.0)FS(0.0)LT(0.0)T(0.0)FS(0.99)PS(0.0)GK K:TMT10,s:Phosphorylated S PSMA2 26012.2 3 2 4092.1 37.8 HUMAN 1 -12.6907 0.4609 SFSRLRRSLDDKPYK-p P17026;S49-p SFSRLRRSLDDKPYK 0.811737876665422 0.00448198400218091 0.0516666666666667 0.714666666666667 1.74139002339106 34.4827331870869 0.0516666666666667 0.714666666666667 0.669670237298962 0.000356226875192819 0.450737571157831 7.90571807002892 P17026 ZNF22 P17026.S49.p_ZNF22 P17026_S49s _1_1_49_49 P17026 P17026 Zinc finger protein 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9234.9234.2 8.67 1.02 5.999 2 1 1 0 752.3956 1423.8197 S49s Hydrogen 49 (R) sLDDKPYK (C) S(0.99)LDDKPY(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S ZNF22 26599.6 4 36 240.73 415.72 HUMAN 1 1.7414 34.4827 SFSSSRASSSRSGGG-p A0A0D9SF53;S619-p SFSSSRASSSRSGGG 0.684616339845596 0.0103255452545617 0.0766666666666667 -0.449666666666667 3.08654273259364 27.8852739784585 0.0766666666666666 -0.449666666666667 0.491298826438796 0.00162731865158871 0.737935949658407 -5.80528138625693 A0A0D9SF53 NotFound A0A0D9SF53.S619.p_NotFound A0A0D9SF53_S619s _1_1_619_619 A0A0D9SF53 A0A0D9SF53|O00571|A0A0D9SG12|O00571-2|A0A0D9SFB3 ATP-dependent RNA helicase DDX3X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3824.3824.3 11.93 11.93 1.182 12 1 1 0 720.3216 2078.99 S619s TMT10 604 (R) QSSGASSSSFSSSRAsSSR (S) QS(0.0)S(0.0)GAS(0.0)S(0.0)S(0.0)S(0.0)FS(0.0)S(0.0)S(0.0)RAS(0.99)S(0.0)S(0.0)R s:Phosphorylated S DDX3X 82160.2 1 14 1042.1 184.93 HUMAN 1 3.0865 -27.8853 SFTDKQQTPEKLPIP-p Q96GX5;T519-p SFTDKQQTPEKLPIP 0.257518332951923 0.002248452490626 -0.208 -0.743 11.1959133877256 41.0220927714333 -0.208 -0.743 0.0759291715212084 7.90297708809255e-05 -2.19046784794829 -10.6007773079921 Q96GX5 MASTL Q96GX5.T519.p_MASTL Q96GX5_T519t _1_1_519_519 Q96GX5 Q96GX5|Q96GX5-3|Q96GX5-2 Serine/threonine-protein kinase greatwall HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28738.28738.5 18.39 18.39 3.531 3 1 1 0 748.421 3658.106 T519t TMT10 507 (K) ENIVNSFTDKQQtPEKLPIPMIAK (N) ENIVNS(0.0)FT(0.0)DKQQT(0.99)PEKLPIPMIAK K:TMT10,t:Phosphorylated T MASTL 98458.4 10 3 659.1 251.91 HUMAN 1 -11.1959 -41.0221 SFTDNAPSPSIGGSS-p O15014;S804-p SFTDNAPSPSIGGSS 0.441027182521617 0.0322345694854982 0.133333333333333 0.326666666666667 6.54784459150081 20.1294681211447 0.133333333333333 0.326666666666667 0.221419334365467 0.00970628832522905 1.38160971860062 3.90310835560289 O15014 ZNF609 O15014.S804.p_ZNF609 O15014_S804s _1_1_804_804 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20641.20641.3 20.04 20.04 2.783 7 1 1 0 722.3421 2085.045 S804s TMT10 795 (K) IYSFTDNAPsPSIGGSSR (L) IY(0.0)S(0.0)FT(0.0)DNAPS(0.99)PS(0.0)IGGS(0.0)S(0.0)R s:Phosphorylated S ZNF609 152443.5 5 21 63.1 699.07 HUMAN 1 6.5478 20.1295 SFTEVPRSPKHAHSS-p O95425-2;S245-p SFTEVPRSPKHAHSS 0.301211864443897 0.411457587643908 -0.211 -0.0773333333333333 9.78570184521242 5.13096852438349 -0.211 -0.0773333333333333 0.105058166102228 0.306833763909909 -1.94450245810457 -1.12777245528566 O95425 SVIL O95425.2.S245.p_SVIL O95425-2_S245s _1_1_245_245 O95425-2 O95425|O95425-3|O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11517.11517.3 13.4 10.03 3.618 4 1 1 0 629.9931 1807.9954 S245s TMT10 236 (R) DSSFTEVPRsPK (H) DS(0.0)S(0.0)FT(0.0)EVPRS(0.99)PK K:TMT10,s:Phosphorylated S SVIL 202384.1 5 5 406.2 324.74 HUMAN 1 -9.7857 -5.131 SFTMVADTPENLRLK-p Q14847-2;T68-p SFTMVADTPENLRLK 0.979213683234262 0.0447171083705694 -0.00566666666666668 -0.267 0.17989286505313 18.062081362128 -0.00566666666666667 -0.267 0.959424299006028 0.0156239868152183 -0.0532750555846154 -3.47198546755117 Q14847 LASP1 Q14847.2.T68.p_LASP1 Q14847-2_T68t _1_1_68_68 Q14847-2 Q14847-2|F6S2S5 Isoform 2 of LIM and SH3 domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21693.21693.4 18.75 18.75 4.801 3 1 1 0 597.8169 2308.2735 T68t TMT10 60 (K) QSFTMVADtPENLRLK (Q) QS(0.0)FT(0.0)MVADT(0.99)PENLRLK K:TMT10,t:Phosphorylated T LASP1 36812.2 6 2 1322.1 154.29 HUMAN 1 -0.1799 -18.0621 SFTNPLHSDDSDSDE-p Q05209;S603-p SFTNPLHSDDSDSDE 0.599304429327995 0.336156248036714 0.07 0.097 4.10798032794049 6.2728542468142 0.07 0.0970000000000001 0.388330916007637 0.23589274020538 0.937714664571478 1.33269756562048 Q05209 PTPN12 Q05209.S603.p_PTPN12 Q05209_S603sS606s_2_2_603_606 Q05209 Q05209|Q05209-3|Q05209-2 Tyrosine-protein phosphatase non-receptor type 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20220.20632.4 18.6 18.6 1.424 8 2 2 0 942.174 3605.7356 S603s S606s TMT10 593 (R) TPLSFTNPLHsDDsDSDERNSDGAVTQNK (T) T(0.0)PLS(0.0)FT(0.0)NPLHS(0.99)DDS(0.99)DS(0.0)DERNS(0.0)DGAVT(0.0)QNK K:TMT10,s:Phosphorylated S PTPN12 88960.6 10 17 644.1 254.82 HUMAN 2 4.108 6.2729 SFTTVADTPENLRLK-p O76041-2;T68-p SFTTVADTPENLRLK 0.761946443912756 0.585542990143469 0.0503333333333333 0.076 2.26072708162054 3.14040217505507 0.0503333333333333 0.0760000000000001 0.594192672493715 0.485243562475629 0.565797879778595 0.748680165763291 O76041 NEBL O76041.2.T68.p_NEBL O76041-2_T68t _1_1_68_68 O76041-2 O76041-2 Isoform 2 of Nebulette HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15266.15266.3 11.13 11.13 3.255 4 1 1 0 629.9733 1807.9388 T68t TMT10 60 (K) QSFTTVADtPENLR (L) QS(0.0)FT(0.0)T(0.0)VADT(0.99)PENLR t:Phosphorylated T NEBL 31595 1 2 5139.1 22.49 HUMAN 1 2.2607 3.1404 SFVPSLFSKKKKNVT-p P55210;S37-p SFVPSLFSKKKKNVT 0.902776256738348 0.80132427943147 -0.0193333333333333 -0.032 0.872859138183759 1.34563940919563 -0.0193333333333333 -0.032 0.81792613662038 0.733560704759001 -0.241675207540325 -0.358427091553942 P55210 CASP7 P55210.S37.p_CASP7 P55210_S37s _1_1_37_37 P55210 P55210-3 Caspase-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29229.29229.3 12.78 12.78 3.454 4 1 1 0 546.2966 1556.9089 S37s TMT10 29 (R) SSFVPSLFsK (K) S(0.0)S(0.0)FVPS(0.0)LFS(0.99)K K:TMT10,s:Phosphorylated S CASP7 34903.8 1 2 3253.1 55.79 HUMAN 1 -0.8729 -1.3456 SFVVPNQTLPQLNIM-p Q01968;T405-p SFVVPNQTLPQLNIM 0.134264480831341 0.00790829872128323 -0.265666666666667 0.906666666666667 17.9076270335869 29.9821042415508 -0.265666666666667 0.906666666666667 0.0161896439121377 0.00100412915221753 -3.44359488331951 6.41651798818845 Q01968 OCRL Q01968.T405.p_OCRL Q01968_T405t _1_1_405_405 Q01968 Q01968|Q01968-2 Inositol polyphosphate 5-phosphatase OCRL-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.34008.34008.3 13.66 13.53 6.482 2 1 1 0 833.4495 2418.3653 T405t TMT10 397 (R) MSFVVPNQtLPQLNIMK (H) MS(0.0)FVVPNQT(0.99)LPQLNIMK K:TMT10,t:Phosphorylated T OCRL 105458 2 1 6143.1 13.66 HUMAN 1 -17.9076 29.9821 SFWQSSQSQNFTAHD-p Q5JTV8;S266-p SFWQSSQSQNFTAHD 0.263920652188996 0.288493903254485 0.171 -0.226 10.9753216843824 7.12292095424394 0.171 -0.226 0.0798854767850829 0.193958092599617 2.15178646367377 -1.48209648483779 Q5JTV8 TOR1AIP1 Q5JTV8.S266.p_TOR1AIP1 Q5JTV8_S266s_1_1_266_266 Q5JTV8 J3KN66|Q5JTV8-3 Torsin-1A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23310.23310.4 20.01 20.01 1.141 9 1 1 0 808.6294 3150.5169 S266s N268n TMT10 252 (R) SSSQYIESFWQSSQsQnFTAHDK (Q) S(0.0)S(0.0)S(0.0)QY(0.0)IES(0.0)FWQS(0.0)S(0.0)QS(0.99)QN(1.0)FT(0.0)AHDK K:TMT10,s:Phosphorylated S,n:Deamidated TOR1AIP1 66418.4 1 15 585.1 265.22 HUMAN 1 10.9753 -7.1229 SFWRFGRSAKRPAGS-p Q9P206-3;S25-p SFWRFGRSAKRPAGS 0.183896650188356 0.508134369093636 -0.338333333333333 -0.269 14.4587745587733 3.94019453281542 -0.338333333333333 -0.269 0.035819749481179 0.403627312950611 -2.77754671820118 -0.905528658825949 Q9P206 KIAA1522 Q9P206.3.S25.p_KIAA1522 Q9P206-3_S25s _1_1_25_25 Q9P206-3 Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.3029.3029.3 8.23 8.23 8.232 2 1 1 0 504.2889 1430.8844 S25s Hydrogen 25 (R) sAKRPAGSAK (A) S(0.99)AKRPAGS(0.0)AK K:TMT10-Lys-Only,s:Phosphorylated S KIAA1522 108782.6 1 3 62.1 704.36 HUMAN 1 -14.4588 -3.9402 SGAFLSPSVSVQECR-p P52948;S1062-p SGAFLSPSVSVQECR 0.405906564884755 0.234721694854237 0.121666666666667 0.117666666666667 7.23030031308145 8.28853477906567 0.121666666666667 0.117666666666667 0.189221276828452 0.148301834087021 1.50126890048754 1.68462583515126 P52948 NUP98 P52948.S1062.p_NUP98 P52948_S1062s _1_1_1062_1062 P52948 P52948|P52948-5|P52948-2|P52948-6 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24336.24336.3 13.47 13.47 1.173 5 1 1 0 727.6809 2101.0586 S1062s TMT10 1053 (K) FTSGAFLSPsVSVQECR (T) FT(0.0)S(0.0)GAFLS(0.0)PS(0.99)VS(0.0)VQECR C:Carbamidomethylation,s:Phosphorylated S NUP98 198716.8 3 21 187.1 472.84 HUMAN 1 7.2303 8.2885 SGAGGGGSKGNSLKR-p Q96S21;S252-p SGAGGGGSKGNSLKR 0.331844171960253 0.261823729556559 -0.134333333333333 -0.25 8.94701074623601 7.66647544717759 -0.134333333333333 -0.25 0.12743799363437 0.171140365545955 -1.79919003840421 -1.57676579728597 Q96S21 RAB40C Q96S21.S252.p_RAB40C Q96S21_S252s _1_1_252_252 Q96S21 Q96S21|Q96S21-2 Ras-related protein Rab-40C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11795.11795.3 10.94 10.94 2.464 5 1 1 0 579.6263 1656.8957 S252s TMT10 240 (R) SYSLASGAGGGGsK (G) S(0.0)Y(0.0)S(0.0)LAS(0.0)GAGGGGS(0.99)K K:TMT10,s:Phosphorylated S RAB40C 31759.9 1 2 4470.1 30.95 HUMAN 1 -8.947 -7.6665 SGAGVLPSPATPRFS-p Q71F56;S1040-p SGAGVLPSPATPRFS 0.902248402372467 0.0764028488621542 0.0203333333333333 0.209 0.877250763710605 14.8214064667971 0.0203333333333333 0.209 0.817099460271071 0.032950298504245 0.242798170578264 2.84319417146372 Q71F56 MED13L Q71F56.S1040.p_MED13L Q71F56_S1040s_1_1_1040_1040 Q71F56 Q71F56 Mediator of RNA polymerase II transcription subunit 13-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30855.30855.4 24.98 21.45 0.547 12 1 1 0 1327.1421 5224.5694 N1019n S1040s TMT10 996 (R) DGYNNVPSVGSLADPDYLNTPQMnTPVTLNSAAPASNSGAGVLPsPATPR (F) DGY(0.0)N(0.0)N(0.0)VPS(0.0)VGS(0.0)LADPDY(0.0)LN(0.33)T(0.0)PQMN(0.33)T(0.0)PVT(0.0)LN(0.33)S(0.0)AAPAS(0.0)N(0.0)S(0.0)GAGVLPS(0.99)PAT(0.0)PR n:Deamidated,s:Phosphorylated S MED13L 245507 2 13 415.1 321.44 HUMAN 1 0.8773 14.8214 SGAHSSASPPRSRSR-p P18615-3;S188-p SGAHSSASPPRSRSR 0.508887458699246 0.0150423224102586 0.116666666666667 0.357 5.41556316814094 25.2208909853562 0.116666666666667 0.357 0.28737149226063 0.00300545964841032 1.17969651634369 5.09350941985623 P18615 NELFE P18615.3.S188.p_NELFE P18615-3_S188s _1_1_188_188 P18615-3 P18615-3|P18615-4 Isoform 2 of Negative elongation factor E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3507.3507.2 14.52 9.42 2.212 4 1 1 0 681.821 1282.6701 S188s TMT10 181 (R) SGAHSSAsPPR (S) S(0.0)GAHS(0.0)S(0.0)AS(0.99)PPR s:Phosphorylated S NELFE 44038 9 5 611.1 261.65 HUMAN 1 5.4156 25.2209 SGAKFRISLGLPVGA-p P62829;S17-p SGAKFRISLGLPVGA 0.843642878291984 0.294174975027372 -0.038 -0.104 1.42968239260774 7.01570690346628 -0.038 -0.104 0.719501594529786 0.198805918659515 -0.378438705251179 -1.46335714230392 P62829 RPL23 P62829.S17.p_RPL23 P62829_S17s _1_1_17_17 P62829 P62829|J3KT29|B9ZVP7 60S ribosomal protein L23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.32070.32070.3 20.47 20.47 17.906 2 1 1 0 937.8365 2731.5329 S17s TMT10 14 (K) FRIsLGLPVGAVINCADNTGAK (N) FRIS(0.99)LGLPVGAVINCADNT(0.0)GAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RPL23 14979.3 1 1 3704.1 44.92 HUMAN 1 -1.4297 -7.0157 SGALPVASPASSRTD-p Q9UBK8;S198-p SGALPVASPASSRTD 0.401913424081807 0.126566152430532 0.255333333333333 -0.186666666666667 7.30669216229133 11.8331853987749 0.255333333333333 -0.186666666666667 0.185922000532226 0.0655664183051838 1.51459843317835 -2.30165115163166 Q9UBK8 MTRR Q9UBK8.S198.p_MTRR Q9UBK8_S198s _1_1_198_198 Q9UBK8 Q9UBK8|Q9UBK8-2 Methionine synthase reductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16147.16214.3 16.14 16.14 1.346 4 1 1 0 689.0114 1985.0501 S198s TMT10 186 (R) GQEEISGALPVAsPASSR (T) GQEEIS(0.0)GALPVAS(0.99)PAS(0.0)S(0.0)R s:Phosphorylated S MTRR 81435.5 1 2 4245.1 34.79 HUMAN 1 7.3067 -11.8332 SGAPGVPSGNGAPGP-p P52272;S29-p SGAPGVPSGNGAPGP 0.436041698805425 0.0795145791240596 0.135333333333333 0.391 6.63784972846653 14.589755673923 0.135333333333333 0.391 0.216877764057142 0.0347555713737566 1.39745958789504 2.80009155940709 P52272 HNRNPM P52272.S29.p_HNRNPM P52272_S29s_1_1_29_29 P52272 P52272|A0A087X0X3|P52272-2|M0R0Y6 Heterogeneous nuclear ribonucleoprotein M HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31142.31343.5 23.78 20.25 2.288 3 1 1 0 1071.9298 5274.6792 S29s N31n Acetyl 2 (M) AAGVEAAAEVAATEIKMEEESGAPGVPsGnGAPGPKGEGERPAQNEK (R) AAGVEAAAEVAAT(0.0)EIKMEEES(0.0)GAPGVPS(0.99)GN(0.99)GAPGPKGEGERPAQN(0.0)EK K:TMT10,s:Phosphorylated S,n:Deamidated HNRNPM 77799.7 6 1 830.1 216.57 HUMAN 1 6.6378 14.5898 SGAQTPKSPPEHYVQ-p P25054;S1371-p SGAQTPKSPPEHYVQ 0.930101995315696 0.0304698237240543 -0.0133333333333333 -0.312333333333333 0.624186629853342 20.4916973495941 -0.0133333333333334 -0.312333333333333 0.86612652102072 0.00892956422093264 -0.176757272852939 -3.98143449878814 P25054 APC P25054.S1371.p_APC P25054_S1371s _1_1_1371_1371 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17892.18099.4 21.04 21.04 2.253 6 1 1 0 782.1444 3045.5868 S1371s TMT10 1364 (K) SGAQTPKsPPEHYVQETPLMFSR (C) S(0.0)GAQT(0.0)PKS(0.99)PPEHY(0.0)VQET(0.0)PLMFS(0.0)R K:TMT10,s:Phosphorylated S APC 313808.5 4 18 33.1 890.71 HUMAN 1 -0.6242 -20.4917 SGARTASTPTPPQTG-p Q04637-9;T212-p SGARTASTPTPPQTG 0.80621185033956 0.289880919002154 0.0373333333333333 -0.104666666666667 1.8029357651255 7.0959123685418 0.0373333333333333 -0.104666666666667 0.660246980132027 0.195168068068452 0.464704556941839 -1.47737815550583 Q04637 EIF4G1 Q04637.9.T212.p_EIF4G1 Q04637-9_T212tT214t_2_2_212_214 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1|Q04637-4|E7EX73|Q04637-5|Q04637-7|Q04637-6 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21251.21251.4 21.33 21.33 1.113 6 2 2 0 962.2162 3685.8983 T212t T214t TMT10 209 (R) TAStPtPPQTGGGLEPQANGETPQVAVIVRPDDR (S) T(0.0)AS(0.0)T(0.99)PT(0.99)PPQT(0.0)GGGLEPQANGET(0.0)PQVAVIVRPDDR t:Phosphorylated T EIF4G1 176975.4 7 33 107.1 585.61 HUMAN 1 1.8029 -7.0959 SGASSDISLDEQYKH-p P22059;S389-p SGASSDISLDEQYKH 0.17368064594083 0.0157813938405238 0.335666666666667 -0.511166666666667 15.1487284827559 24.9044872982727 0.335666666666667 -0.511166666666667 0.0305581565683115 0.00323259480140905 2.90639215020906 -5.01340073278144 P22059 OSBP P22059.S389.p_OSBP P22059_S386sS389s_2_2_386_389 P22059 P22059 Oxysterol-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19132.19132.2 15.99 15.99 1.145 7 2 2 0 1295.5922 2430.24 S386s S389s TMT10 377 (R) TGSNISGASsDIsLDEQYK (H) T(0.0)GS(0.0)NIS(0.0)GAS(0.0)S(0.99)DIS(0.99)LDEQY(0.0)K K:TMT10,s:Phosphorylated S OSBP 90274.8 6 15 468.1 302.79 HUMAN 2 15.1487 -24.9045 SGATSFGSNEEISEC-p Q5VT06;S2431-p SGATSFGSNEEISEC 0.537153491656725 0.877725994037635 0.0856666666666667 -0.0163333333333333 4.98923409309427 0.796514687467206 0.0856666666666667 -0.0163333333333333 0.317012648642116 0.832431548467421 1.10208481846336 -0.22200610046084 Q5VT06 CEP350 Q5VT06.S2431.p_CEP350 Q5VT06_S2431s _1_1_2431_2431 Q5VT06 Q5VT06 Centrosome-associated protein 350 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19683.19683.3 21.02 21.02 3.177 9 1 1 0 949.1009 2765.3188 S2431s TMT10 2421 (R) SSTSGATSFGsNEEISECLSEK (S) S(0.0)S(0.0)T(0.0)S(0.0)GAT(0.0)S(0.0)FGS(0.99)NEEIS(0.0)ECLS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CEP350 352521.4 2 20 265.1 395.34 HUMAN 1 4.9892 -0.7965 SGAVQAASPERAGWT-p Q86U90;S60-p SGAVQAASPERAGWT 0.835690822687422 0.0423601538772069 -0.031 -0.281 1.50649630383579 18.3938211623241 -0.031 -0.281 0.706887610002909 0.0144749770479731 -0.396509300488246 -3.53943231697668 Q86U90 YRDC Q86U90.S60.p_YRDC Q86U90_S60s _1_1_60_60 Q86U90 Q86U90 YrdC domain-containing protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18550.18550.3 14.02 14.02 8.595 2 1 1 0 677.7022 1951.1286 S60s TMT10 47 (R) LLRLPGSGAVQAAsPER (A) LLRLPGS(0.0)GAVQAAS(0.99)PER s:Phosphorylated S YRDC 29726.7 3 2 3868.1 41.55 HUMAN 1 -1.5065 -18.3938 SGCKVQISPDSGGLP-p A0A087WTP3;S181-p SGCKVQISPDSGGLP 0.804458682239313 0.519161969270771 0.0416666666666667 0.0736666666666667 1.82144688641669 3.82471022763896 0.0416666666666667 0.0736666666666667 0.657438769939252 0.414504239895949 0.46888676065826 0.883326087990971 A0A087WTP3 NotFound A0A087WTP3.S181.p_NotFound A0A087WTP3_S181s _1_1_181_181 A0A087WTP3 Q92945|A0A087WTP3 Far upstream element-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15528.15528.3 14.08 14.08 2.549 2 1 1 0 555.2808 1583.8591 S181s TMT10 178 (K) VQIsPDSGGLPER (S) VQIS(0.99)PDS(0.0)GGLPER s:Phosphorylated S KHSRP 73482.9 3 4 970.1 193.49 HUMAN 1 1.8214 3.8247 SGCPKSASYSLESTD-p Q9H706-3;S699-p SGCPKSASYSLESTD 0.0446868387859731 0.00373082510144117 0.517 0.760666666666667 29.9741301711381 36.0210493129755 0.517 0.760666666666667 0.0010059745249339 0.000249974131812405 6.42425647277132 8.47780129504492 Q9H706 GAREM Q9H706.3.S699.p_GAREM Q9H706-3_S699s _1_1_699_699 Q9H706-3 Q9H706|Q9H706-3|Q9H706-2 Isoform 3 of GRB2-associated and regulator of MAPK protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15351.15351.2 14.93 11.36 1.135 6 1 1 0 912.9561 1744.9369 S699s TMT10 697 (K) SAsYSLESTDVK (S) S(0.0)AS(0.99)Y(0.0)S(0.0)LES(0.0)T(0.0)DVK K:TMT10,s:Phosphorylated S GAREM1 98523.6 2 5 2571.1 78.14 HUMAN 1 29.9741 36.021 SGCSPRDSGCYESSE-p O94885;S725-p SGCSPRDSGCYESSE 0.137289036873108 0.279354203184613 -0.324 -0.144333333333333 17.692509455089 7.29755348837488 -0.324 -0.144333333333333 0.0170117524550231 0.186313640194623 -3.40030033732581 -1.51256855667739 O94885 SASH1 O94885.S725.p_SASH1 O94885_S725s _1_1_725_725 O94885 O94885|A0A087WW74 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19764.19764.4 12.54 12.54 1.166 7 1 1 0 924.9255 3616.726 S725s TMT10 710 (K) LLVDSQGLSGCSPRDsGCYESSENLENGK (T) LLVDS(0.0)QGLS(0.0)GCS(0.0)PRDS(0.99)GCY(0.0)ES(0.0)S(0.0)ENLENGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SASH1 137734.8 1 14 295.1 379.69 HUMAN 1 -17.6925 -7.2976 SGDARRLTVSSLQES-p P21333-2;T2328-p SGDARRLTVSSLQES 0.0973600331101722 0.227641136635105 -0.546 0.199 21.4470972963647 8.46665852403149 -0.546 0.199 0.00716622220562041 0.142342355265437 -4.19662677768021 1.71545554244332 P21333 FLNA P21333.2.T2328.p_FLNA P21333-2_T2328t _1_1_2328_2328 P21333-2 Q60FE5|Q5HY54|A0A087WWY3|P21333|P21333-2 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18306.18306.3 12.13 12.13 1.18 4 1 1 0 652.7025 1876.1268 T2328t TMT10 2326 (R) RLtVSSLQESGLK (V) RLT(0.99)VS(0.0)S(0.0)LQES(0.0)GLK K:TMT10,t:Phosphorylated T FLNA 282751.6 3 19 198.1 454.47 HUMAN 1 -21.4471 8.4667 SGDETPGSEVPGDKA-p Q1KMD3;S168-p SGDETPGSEVPGDKA 0.977130047691108 0.00796790921037812 -0.0055 0.558333333333333 0.196957684139521 29.9225294502392 -0.00550000000000001 0.558333333333333 0.955661810957549 0.00101799830520874 -0.0582214594384164 6.39848003597773 Q1KMD3 HNRNPUL2 Q1KMD3.S168.p_HNRNPUL2 Q1KMD3_S161sS168s_2_2_161_168 Q1KMD3 Q1KMD3|H3BQZ7 Heterogeneous nuclear ribonucleoprotein U-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12149.12149.4 19.28 19.28 1.8 4 2 2 0 906.899 3464.6392 S161s S168s TMT10 161 (R) sGDETPGsEVPGDKAAEEQGDDQDSEK (S) S(0.99)GDET(0.0)PGS(0.99)EVPGDKAAEEQGDDQDS(0.0)EK K:TMT10,s:Phosphorylated S HNRNPUL2 85673.7 28 11 294.1 379.87 HUMAN 2 -0.197 29.9225 SGDGAGPSPEEKDFL-p Q92917;S42-p SGDGAGPSPEEKDFL 0.793362409885505 0.263598686727802 -0.0523333333333333 -0.109333333333333 1.94009344331426 7.62925707932984 -0.0523333333333334 -0.109333333333333 0.639721071020361 0.17261331456415 -0.495494050162348 -1.57029878400725 Q92917 GPKOW Q92917.S42.p_GPKOW Q92917_S42s _1_1_42_42 Q92917 Q92917 G-patch domain and KOW motifs-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6750.6750.2 18.05 18.05 4.414 2 1 1 0 869.8912 1658.8071 S42s Hydrogen 32 (R) LADSGDGAGPsPEEK (D) LADS(0.0)GDGAGPS(0.99)PEEK K:TMT10-Lys-Only,s:Phosphorylated S GPKOW 52456.1 5 4 1512.1 134.72 HUMAN 1 -1.9401 -7.6293 SGDKCTKSLPYEPYK-p Q96GV9;S140-p SGDKCTKSLPYEPYK 0.869521280017076 0.0474557203885791 -0.045 0.422 1.18687091065953 17.7057504329615 -0.045 0.422 0.760874288999745 0.0169599651963752 -0.320117781408308 3.40023128112661 Q96GV9 C5orf30 Q96GV9.S140.p_C5orf30 Q96GV9_S140s _1_1_140_140 Q96GV9 Q96GV9 UNC119-binding protein C5orf30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18429.18429.3 10.63 4.74 2.304 3 1 1 0 512.2715 1454.8295 S140s TMT10 140 (K) sLPYEPYK (A) S(0.99)LPY(0.0)EPY(0.0)K K:TMT10,s:Phosphorylated S C5orf30 23368.2 1 4 2347.1 87.13 HUMAN 1 -1.1869 17.7058 SGDRAEGSPHFHLEW-p Q693B1-2;S191-p SGDRAEGSPHFHLEW 0.389389394272965 0.278248808944813 -0.128666666666667 0.170666666666667 7.57718835772926 7.32019570861976 -0.128666666666667 0.170666666666667 0.174695277208418 0.185344809853538 -1.56171569964821 1.51651515678129 Q693B1 KCTD11 Q693B1.2.S191.p_KCTD11 Q693B1-2_S191s _1_1_191_191 Q693B1-2 Q693B1-2 Isoform 2 of BTB/POZ domain-containing protein KCTD11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12425.12425.3 8.1 1.69 99 1 1 1 0 648.3134 1862.9499 S191s TMT10 188 (R) AEGsPHFHLEWAPR (P) AEGS(1.0)PHFHLEWAPR s:Phosphorylated S KCTD11 29988.4 1 1 7028.1 8.1 HUMAN 1 -7.5772 7.3202 SGDRSGYSSPGSPGT-p P10636;S515-p SGDRSGYSSPGSPGT 0.126572282263763 0.00887586990450017 0.273666666666667 0.454 18.6428819247412 29.0683224485001 0.273666666666667 0.454 0.0136682151864947 0.00123927518954588 3.59356101964258 6.1442482621286 P10636 MAPT P10636.S515.p_MAPT P10636_S515s _1_1_515_515 P10636 P10636-9|A0A0G2JMX7|A0A0G2JS76|A0A0G2JPD5|A0A0G2JQJ7|P10636-8|P10636-7|P10636-5|P10636-6|P10636-4|P10636-2|I3L170|P10636-3 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6807.6807.2 13.25 13.25 1.16 7 1 1 0 851.8867 1622.7972 S515s TMT10 512 (R) SGYsSPGSPGTPGSR (S) S(0.0)GY(0.0)S(0.99)S(0.0)PGS(0.0)PGT(0.0)PGS(0.0)R s:Phosphorylated S MAPT 79154.4 7 11 119.1 551.6 HUMAN 1 18.6429 29.0683 SGDSGYPSEKRGELD-p O00418;S445-p SGDSGYPSEKRGELD 0.931581314885231 0.00285263123867896 -0.02 0.685333333333333 0.610376291451761 38.49578302151 -0.02 0.685333333333333 0.868885142072231 0.00014139097778795 -0.173071266376903 9.4749446166778 O00418 EEF2K O00418.S445.p_EEF2K O00418_S445s _1_1_445_445 O00418 O00418 Eukaryotic elongation factor 2 kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3861.3861.5 21.02 21.02 2.572 5 1 1 0 587.6492 2854.2462 S445s Hydrogen 425 (R) DHDHLDNHRESENSGDSGYPsEK (R) DHDHLDNHRES(0.0)ENS(0.0)GDS(0.0)GY(0.0)PS(0.99)EK K:TMT10-Lys-Only,s:Phosphorylated S EEF2K 82713.2 4 4 995.1 190.99 HUMAN 1 -0.6104 38.4958 SGDTGSLSCDNALFV-p Q5QJE6;S483-p SGDTGSLSCDNALFV 0.579285083552818 0.129179148908115 0.0893333333333333 0.217333333333333 4.36107513825895 11.7132295796606 0.0893333333333333 0.217333333333333 0.366346870687554 0.0674026609350714 0.985550301521264 2.28046437884646 Q5QJE6 DNTTIP2 Q5QJE6.S483.p_DNTTIP2 Q5QJE6_S483s _1_1_483_483 Q5QJE6 Q5QJE6|J3KP30 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30456.30456.3 21.53 18.7 1.137 8 1 1 0 1176.2167 3446.6707 S483s TMT10 473 (R) ESLSGDTGSLsCDNALFVIDTTPGMSADK (N) ES(0.0)LS(0.0)GDT(0.0)GS(0.0)LS(0.99)CDNALFVIDT(0.0)T(0.0)PGMS(0.0)ADK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DNTTIP2 84866.9 5 16 448.1 309.47 HUMAN 1 4.3611 11.7132 SGDYMPMSPKSVSAP-p P35568;S636-p SGDYMPMSPKSVSAP 0.0576036189507777 0.0867119305335331 -0.420666666666667 -0.288 27.0388619791724 14.0574861913672 -0.420666666666667 -0.288 0.00197748775109819 0.0392872274218059 -5.57939217155449 -2.70185031164769 P35568 IRS1 P35568.S636.p_IRS1 P35568_S636s _1_1_636_636 P35568 P35568 Insulin receptor substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13799.13799.3 15.48 11.68 6.875 3 1 1 0 689.0197 1985.0803 S636s TMT10 627 (R) KGSGDYMPMsPK (S) KGS(0.0)GDY(0.0)MPMS(0.99)PK K:TMT10,s:Phosphorylated S IRS1 132786.8 2 12 229.1 423.14 HUMAN 1 -27.0389 -14.0575 SGEAASCSPIIMPYK-p Q14244-7;S276-p SGEAASCSPIIMPYK 0.689385882760621 0.00320981770772267 -0.0623333333333334 -0.780666666666667 3.0300338723538 37.3919582159707 -0.0623333333333333 -0.780666666666667 0.497733202944603 0.000182307350062073 -0.726505941841593 -9.01795272332228 Q14244 MAP7 Q14244.7.S276.p_MAP7 Q14244-7_S276s _1_1_276_276 Q14244-7 Q14244-7|Q14244-4 Isoform 7 of Ensconsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23672.23672.3 19.54 19.54 1.167 6 1 1 0 864.7665 2512.3192 S276s TMT10 264 (K) STAALSGEAASCsPIIMPYK (A) S(0.0)T(0.0)AALS(0.0)GEAAS(0.0)CS(0.99)PIIMPY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP7 87064.8 1 7 581.1 266.4 HUMAN 1 -3.03 -37.392 SGEEMEESEEDEEEE-p Q9P1Z0;S636-p SGEEMEESEEDEEEE 0.292579056536687 0.00752314179680432 -0.676 0.768 10.0686838771729 30.3399605176654 -0.676 0.768 0.0984309354020818 0.000924706580540237 -1.9936457695388 6.52572951153083 Q9P1Z0 ZBTB4 Q9P1Z0.S636.p_ZBTB4 Q9P1Z0_S629sS636s_2_2_629_636 Q9P1Z0 Q9P1Z0 Zinc finger and BTB domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20912.20912.4 18.65 18.65 3.988 5 2 2 0 1306.2612 5062.1062 S629s S636s TMT10 618 (R) ISETDLRPGELsGEEMEEsEEDEEEEDEEEEEEDEEESK (A) IS(0.0)ET(0.0)DLRPGELS(0.99)GEEMEES(0.99)EEDEEEEDEEEEEEDEEES(0.0)K K:TMT10,s:Phosphorylated S ZBTB4 106081.6 1 6 2994.1 63.81 HUMAN 1 -10.0687 30.34 SGEGKGSTDDEAEDG-p O95180;T1175-p SGEGKGSTDDEAEDG 0.506609842161293 0.114269099239299 0.108666666666667 0.201666666666667 5.44767359080342 12.4250516668515 0.108666666666667 0.201666666666667 0.285254589729912 0.0572130148132676 1.1855008479769 2.40671061107363 O95180 CACNA1H O95180.T1175.p_CACNA1H O95180_S1174sT1175t_2_2_1174_1175 O95180 O95180|O95180-2|A0A1W2PR14|A0A1W2PQW2 Voltage-dependent T-type calcium channel subunit alpha-1H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15536.15536.3 8.31 8.31 8.311 4 2 2 0 890.7224 2510.2258 S1174s T1175t TMT10 1164 (R) ESLLSGEGKGstDDEAEDGR (A) ES(0.0)LLS(0.0)GEGKGS(0.99)T(0.99)DDEAEDGR K:TMT10,s:Phosphorylated S,t:Phosphorylated T CACNA1H 262353.2 1 3 5013.1 23.9 HUMAN 1 5.4477 12.4251 SGEINIDSSGETVGS-p P42695;S530-p SGEINIDSSGETVGS 0.375226204548174 0.0403911539482336 -0.140666666666667 0.366333333333333 7.87760329580847 18.6876146885395 -0.140666666666667 0.366333333333333 0.163019542659588 0.0135281537715004 -1.61392065457504 3.59969701290692 P42695 NCAPD3 P42695.S530.p_NCAPD3 P42695_S530sS531s_2_2_530_531 P42695 P42695|G3V1A9|E9PKK4 Condensin-2 complex subunit D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.11053.11438.2 13.84 13.84 2.552 6 2 2 0 1133.9385 2106.9422 S530s S531s Hydrogen 520 (R) SEPSGEINIDssGETVGSGER (C) S(0.0)EPS(0.0)GEINIDS(0.99)S(0.99)GET(0.0)VGS(0.0)GER s:Phosphorylated S NCAPD3 171055.8 3 10 1254.1 161.61 HUMAN 1 -7.8776 18.6876 SGEKNEGSESAPEGQ-p P67809;S174-p SGEKNEGSESAPEGQ 0.156803893293657 0.0592934192331361 0.274 -0.217333333333333 16.1489013383508 16.3473997532979 0.274 -0.217333333333333 0.0242722404732192 0.0231878255663482 3.09683334062472 -3.13290856527252 P67809 YBX1 P67809.S174.p_YBX1 P67809_S174s _1_1_174_174 P67809 P67809 Nuclease-sensitive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6654.6654.4 24.74 21.35 1.119 6 1 1 0 949.6788 3715.7221 S174s TMT10 157 (R) NYQQNYQNSESGEKNEGsESAPEGQAQQR (R) NY(0.0)QQNY(0.0)QNS(0.0)ES(0.0)GEKNEGS(0.99)ES(0.0)APEGQAQQR K:TMT10,s:Phosphorylated S YBX1 35923.5 1 13 929.2 199.34 HUMAN 1 16.1489 -16.3474 SGEMPPASPSFPRNK-p Q96JM7;S608-p SGEMPPASPSFPRNK 0.906740608202702 0.204159964881708 0.0186666666666667 -0.126333333333333 0.834183521405106 9.07752905304346 0.0186666666666667 -0.126333333333333 0.825242617452127 0.123665083393119 0.23175180450409 -1.82112323042682 Q96JM7 L3MBTL3 Q96JM7.S608.p_L3MBTL3 Q96JM7_S608s _1_1_608_608 Q96JM7 Q96JM7|Q96JM7-2 Lethal(3)malignant brain tumor-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20526.20730.4 20.78 17.62 2.489 3 1 1 0 671.0834 2601.3445 S608s TMT10 593 (K) DRIFPDRLSGEMPPAsPSFPR (N) DRIFPDRLS(0.0)GEMPPAS(0.99)PS(0.0)FPR s:Phosphorylated S L3MBTL3 89704.4 18 3 1586.1 129.42 HUMAN 1 0.8342 -9.0775 SGEPALRTKSNSLSE-p Q5T1M5;T342-p SGEPALRTKSNSLSE 0.732783197794934 0.0237293674313767 0.064 -0.327 2.55486692762817 22.1586882413988 0.064 -0.327 0.555281631268884 0.00608318712294646 0.628454053118638 -4.35366514963576 Q5T1M5 FKBP15 Q5T1M5.T342.p_FKBP15 Q5T1M5_T342t _1_1_342_342 Q5T1M5 Q5T1M5|Q5T1M5-2|Q5T1M5-3 FK506-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6852.6852.3 7.28 7.28 7.278 2 1 1 0 499.6139 1416.8575 T342t TMT10 335 (K) SGEPALRtK (S) S(0.0)GEPALRT(0.99)K K:TMT10,t:Phosphorylated T FKBP15 134140.9 6 4 173.1 487.64 HUMAN 1 2.5549 -22.1587 SGEQAEGSPGGPGDS-p P38936;S130-p SGEQAEGSPGGPGDS 0.0752440132125947 0.00107644966075265 -0.511666666666667 -1.20433333333333 24.0403979690748 50.1170501610999 -0.511666666666667 -1.20433333333333 0.00394421157334389 9.73408162941974e-06 -4.80477306048735 -15.7718876768668 P38936 CDKN1A P38936.S130.p_CDKN1A P38936_S130s _1_1_130_130 P38936 P38936 Cyclin-dependent kinase inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4147.4147.2 20.55 20.55 6.146 3 1 1 0 991.4271 1901.8787 S130s TMT10 123 (R) SGEQAEGsPGGPGDSQGR (K) S(0.0)GEQAEGS(0.99)PGGPGDS(0.0)QGR s:Phosphorylated S CDKN1A 18404.3 3 1 4068.1 38.22 HUMAN 1 -24.0404 -50.1171 SGEQLVGSPQDKAAE-p Q2NKX8;S1188-p SGEQLVGSPQDKAAE 0.0294621594800929 0.00389791878905511 -0.726 -0.699 35.7506560543476 35.5589209323384 -0.726 -0.699 0.000266032315545114 0.000278040401366701 -8.39143252067159 -8.30226458275186 Q2NKX8 ERCC6L Q2NKX8.S1188.p_ERCC6L Q2NKX8_S1188s _1_1_1188_1188 Q2NKX8 Q2NKX8|B5MDQ0 DNA excision repair protein ERCC-6-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29161.29161.5 27.53 25.11 2.892 9 1 1 0 899.667 4414.3419 S1188s TMT10 1157 (K) SSWLMTSKPSALAQETSLGAPEPLSGEQLVGsPQDK (A) S(0.0)S(0.0)WLMT(0.0)S(0.0)KPS(0.0)ALAQET(0.0)S(0.0)LGAPEPLS(0.0)GEQLVGS(0.99)PQDK K:TMT10,s:Phosphorylated S ERCC6L 142070.4 7 12 422.1 320.12 HUMAN 1 -35.7507 -35.5589 SGESLAQSPDSSKSI-p Q9H7U1-3;S206-p SGESLAQSPDSSKSI 0.0782221681558717 0.00283011770418068 -0.423 -0.754 23.621990216537 38.5484651024367 -0.423 -0.754 0.0043431114926884 0.000139686195728423 -4.70302399750317 -9.49726678647834 Q9H7U1 CCSER2 Q9H7U1.3.S206.p_CCSER2 Q9H7U1-3_S206s _1_1_206_206 Q9H7U1-3 Q9H7U1-3|Q9H7U1-2 Isoform 3 of Serine-rich coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8409.8409.2 16.05 9.87 3.12 7 1 1 0 1002.9829 1924.9864 S206s TMT10 197 (R) SSSGESLAQsPDSSK (S) S(0.0)S(0.0)S(0.0)GES(0.0)LAQS(0.99)PDS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CCSER2 117824 3 3 2789.1 70.56 HUMAN 1 -23.622 -38.5485 SGEVDATSDQEESVA-p Q8NCD3;S123-p SGEVDATSDQEESVA 0.19675938921535 0.0347677052789133 0.246666666666667 -0.454666666666667 13.7587168475024 19.643564991352 0.246666666666667 -0.454666666666667 0.0420850953285287 0.0108553417578735 2.64872440818336 -3.79939504993641 Q8NCD3 HJURP Q8NCD3.S123.p_HJURP Q8NCD3_S123s _1_1_123_123 Q8NCD3 Q8NCD3 Holliday junction recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29330.29330.3 16.58 16.58 1.186 5 1 1 0 1311.6656 3853.002 S123s TMT10 116 (K) SGEVDATsDQEESVAWALAPAVPQSPLKNELR (R) S(0.0)GEVDAT(0.0)S(0.99)DQEES(0.0)VAWALAPAVPQS(0.0)PLKNELR K:TMT10,s:Phosphorylated S HJURP 84336.4 5 1 596.1 263.83 HUMAN 1 13.7587 -19.6436 SGFGARLSPGSGGPE-p O95613;S2352-p SGFGARLSPGSGGPE 0.629008964028517 0.0576729795871987 0.078 -0.266666666666667 3.74068132541613 16.5053382839546 0.078 -0.266666666666667 0.422602310802448 0.0223597102598669 0.867224283227536 -3.16350858751113 O95613 PCNT O95613.S2352.p_PCNT O95613_S2352s _1_1_2352_2352 O95613 O95613|O95613-2 Pericentrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17586.17586.4 19.67 19.67 1.143 8 1 1 0 835.1559 3257.6348 S2352s TMT10 2342 (K) SDGSGFGARLsPGSGGPEAQTAGPVTPASISGR (F) S(0.0)DGS(0.0)GFGARLS(0.99)PGS(0.0)GGPEAQT(0.0)AGPVT(0.0)PAS(0.0)IS(0.0)GR s:Phosphorylated S PCNT 380826.2 2 15 222.1 428 HUMAN 1 3.7407 -16.5053 SGFGPANSLEDVVRL-p Q52LW3;S499-p SGFGPANSLEDVVRL 0.312004739259331 0.717369465720309 -0.149 -0.04 9.46261678465659 1.98534053021798 -0.149 -0.04 0.113171825571055 0.63309071913375 -1.88847980845771 -0.505494610672116 Q52LW3 ARHGAP29 Q52LW3.S499.p_ARHGAP29 Q52LW3_S499s _1_1_499_499 Q52LW3 Q52LW3|F8VWZ8 Rho GTPase-activating protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23338.23338.5 10.7 12.24 1.18 10 1 1 0 1128.5483 5558.761 S499s TMT10 485 (K) HLNSSQPSGFGPANsLEDVVRLPDSSNKIEEDRCSNSADITGPSFIR (S) HLNS(0.0)S(0.0)QPS(0.0)GFGPANS(0.99)LEDVVRLPDS(0.0)S(0.0)NKIEEDRCS(0.0)NS(0.0)ADIT(0.0)GPS(0.0)FIR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ARHGAP29 143601.5 1 8 517.1 284.75 HUMAN 1 -9.4626 -1.9853 SGFPFLESENEKNAP-p Q9H5J8;S138-p SGFPFLESENEKNAP 0.784157423434827 0.642221827133025 -0.049 0.07 2.03266422187527 2.62081028605497 -0.049 0.07 0.626229580166495 0.546913912769261 -0.516023675718588 0.64219928200975 Q9H5J8 TAF1D Q9H5J8.S138.p_TAF1D Q9H5J8_S138s _1_1_138_138 Q9H5J8 Q9H5J8|E9PM59 TATA box-binding protein-associated factor RNA polymerase I subunit D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25124.25124.3 13.21 13.21 13.21 2 1 1 0 660.3235 1898.99 S138s TMT10 130 (R) GSGFPFLEsENEK (N) GS(0.0)GFPFLES(0.99)ENEK K:TMT10,s:Phosphorylated S TAF1D 32171.4 3 2 3161.1 58.98 HUMAN 1 -2.0327 2.6208 SGFSSRASDKDITVS-p P49790-3;S192-p SGFSSRASDKDITVS 0.584672854353861 0.764274574239123 -0.138666666666667 0.0516666666666667 4.2896078101969 1.61278912998599 -0.138666666666667 0.0516666666666667 0.372425336620756 0.6897966597168 -0.972099206622599 0.421189433028961 P49790 NUP153 P49790.3.S192.p_NUP153 P49790-3_S192s _1_1_192_192 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11837.11837.2 14.49 14.49 6.177 3 1 1 0 916.0112 1751.0518 S192s TMT10 191 (R) AsDKDITVSK (N) AS(0.99)DKDIT(0.0)VS(0.0)K K:TMT10,s:Phosphorylated S NUP153 158989.2 5 3 64.1 696.53 HUMAN 1 -4.2896 1.6128 SGFTGRQSPAGISLG-p Q9UPM8;S676-p SGFTGRQSPAGISLG 0.352645276788012 0.73575025977309 -0.146333333333333 -0.038 8.40607261526532 1.83675507717004 -0.146333333333333 -0.038 0.144342006611952 0.655125482069008 -1.70554068699711 -0.472285681312185 Q9UPM8 AP4E1 Q9UPM8.S676.p_AP4E1 Q9UPM8_S676s _1_1_676_676 Q9UPM8 Q9UPM8|Q9UPM8-2 AP-4 complex subunit epsilon-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32906.32906.4 23.19 23.19 1.136 12 1 1 0 1165.5828 4579.3357 S676s TMT10 656 (K) VLNFEPYGLSFSSSGFTGRQsPAGISLGSDVSGNSAETGLK (E) VLNFEPY(0.0)GLS(0.0)FS(0.0)S(0.0)S(0.0)GFT(0.0)GRQS(0.99)PAGIS(0.0)LGS(0.0)DVS(0.0)GNS(0.0)AET(0.0)GLK K:TMT10,s:Phosphorylated S AP4E1 128483.2 4 1 2801.1 70.11 HUMAN 1 -8.4061 -1.8368 SGGAGGRSLDSRLEL-p Q9Y3Q8;S123-p SGGAGGRSLDSRLEL 0.206446708127283 0.315302344151525 0.408333333333333 -0.241333333333333 13.2493832489771 6.6229302198803 0.408333333333333 -0.241333333333333 0.0473218456970403 0.217624094958302 2.55610307108691 -1.39446921542018 Q9Y3Q8 TSC22D4 Q9Y3Q8.S123.p_TSC22D4 Q9Y3Q8_S123s _1_1_123_123 Q9Y3Q8 Q9Y3Q8 TSC22 domain family protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3902.3902.3 8.04 2.84 3.289 3 1 1 0 519.5844 1476.7716 S123s TMT10 114 (R) GASGGAGGRsLDSR (L) GAS(0.0)GGAGGRS(0.99)LDS(0.0)R s:Phosphorylated S TSC22D4 41082.3 2 3 648.1 254.5 HUMAN 1 13.2494 -6.6229 SGGARGGSGGFGDEC-p P50895;S621-p SGGARGGSGGFGDEC 0.0832139716415161 0.669024579634656 -0.407666666666667 0.078 23.0767105703379 2.38715272047501 -0.407666666666667 0.078 0.00492412357031585 0.577144721430221 -4.57258516417305 0.592855744204943 P50895 BCAM P50895.S621.p_BCAM P50895_S621s _1_1_621_621 P50895 P50895 Basal cell adhesion molecule HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9882.9882.2 10.1 10.1 99 1 1 1 0 626.2314 1171.4887 S621s TMT10 619 (R) GGsGGFGDEC (-) GGS(1.0)GGFGDEC C:Carbamidomethylation,s:Phosphorylated S BCAM 68202.4 1 3 4039.1 38.76 HUMAN 1 -23.0767 2.3872 SGGEKAISVRGDSEE-p E7EW59;S660-p SGGEKAISVRGDSEE 0.490692853704506 0.0244824157611905 -0.105333333333333 0.351 5.69601156054363 21.9378349648788 -0.105333333333333 0.351 0.269400776983836 0.00640053834166212 -1.23021540072383 4.30319428973484 E7EW59 SALL2 E7EW59.S660.p_SALL2 E7EW59_S660sS665sS669s_3_3_660_669 E7EW59 E7EW59 Sal-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27435.27435.4 8.52 8.52 1.84 5 3 3 0 858.6395 3191.6432 S660s S665s S669s TMT10 658 (K) AIsVRGDsEEAsGAEEEVGTVAAAATAGK (E) AIS(0.99)VRGDS(0.99)EEAS(0.99)GAEEEVGT(0.0)VAAAAT(0.0)AGK K:TMT10,s:Phosphorylated S SALL2 96608.7 1 5 179.2 480.48 HUMAN 1 -5.696 21.9378 SGGFGSRSLYNLRGN-p P19013;S51-p SGGFGSRSLYNLRGN 0.659511115500432 0.247773567451614 -0.087 0.124 3.39189529769942 7.98455550847137 -0.087 0.124 0.457941993357012 0.159053946395653 -0.798946123907597 1.63196506203156 P19013 NotFound P19013.S51.p_NotFound P19013_S51s _1_1_51_51 P19013 P19013|F8VZR6|F8VX05 Keratin, type II cytoskeletal 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13950.13950.3 14.53 6.54 1.117 5 1 1 0 657.3099 1889.9489 S51s TMT10 42 (R) CSSGGFGSRsLYNLR (G) CS(0.0)S(0.0)GGFGS(0.0)RS(0.99)LY(0.0)NLR C:Carbamidomethylation,s:Phosphorylated S KRT4 57683.6 1 47 69.99 672.47 HUMAN 1 -3.3919 7.9846 SGGGSGGSGGQVSLK-p Q9H7N4;S936-p SGGGSGGSGGQVSLK 0.300478673172259 0.0549350907862547 0.146333333333333 0.228666666666667 9.81102902744771 16.7930467897375 0.146333333333333 0.228666666666667 0.104447271010574 0.0209264384801125 1.94889767518471 3.21956794268262 Q9H7N4 SCAF1 Q9H7N4.S936.p_SCAF1 Q9H7N4_S936s _1_1_936_936 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9944.9944.2 10.63 10.63 2.105 4 1 1 0 886.9514 1692.9281 S936s TMT10 929 (R) SGGGSGGsGGQVSLK (K) S(0.0)GGGS(0.0)GGS(0.99)GGQVS(0.0)LK K:TMT10,s:Phosphorylated S SCAF1 139895 3 18 76.1 647.25 HUMAN 1 9.811 16.793 SGGGSGGYGSRRF__-p P51991;Y373-p SGGGSGGYGSRRF__ 0.0658837618616825 0.530111871359837 0.647666666666667 -0.227 25.4915334737259 3.70675865607312 0.647666666666667 -0.227 0.00282388269894108 0.425916175807275 5.16935403556741 -0.860506053562202 P51991 HNRNPA3 P51991.Y373.p_HNRNPA3 P51991_Y373y _1_1_373_373 P51991 P51991|P51991-2 Heterogeneous nuclear ribonucleoprotein A3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8547.8583.3 21.56 21.56 1.115 9 1 1 0 740.6445 2139.9529 Y373y TMT10 355 (R) SSGSPYGGGYGSGGGSGGyGSR (R) S(0.0)S(0.0)GS(0.0)PY(0.0)GGGY(0.0)GS(0.0)GGGS(0.0)GGY(0.99)GS(0.0)R y:Phosphorylated Y HNRNPA3 39822.5 3 4 62.1 37.54 HUMAN 1 25.4915 -3.7068 SGGGSRRSLHLDKSS-p Q96T37;S97-p SGGGSRRSLHLDKSS 0.726691746567019 0.89086011292226 0.13 0.0516666666666667 2.62986542682153 0.704463748314542 0.13 0.0516666666666668 0.545774772544446 0.850263674300183 0.644176164825363 0.197990922129081 Q96T37 RBM15 Q96T37.S97.p_RBM15 Q96T37_S97s _1_1_97_97 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5596.5596.3 9.58 9.58 99 1 1 1 0 393.2145 1097.6629 S97s Hydrogen 96 (R) RsLHLDK (S) RS(1.0)LHLDK K:TMT10-Lys-Only,s:Phosphorylated S RBM15 107414.9 1 4 55.1 724.11 HUMAN 1 2.6299 0.7045 SGGGSVASPPPSPAM-p O75420;S24-p SGGGSVASPPPSPAM 0.554720459620056 0.992447996701479 0.118666666666667 0.00100000000000002 4.72513477285332 0.0474802108542152 0.118666666666667 0.00100000000000002 0.336888761046354 0.989126822444973 1.0534380421762 0.0142675333889533 O75420 GIGYF1 O75420.S24.p_GIGYF1 O75420_S24s _1_1_24_24 O75420 O75420 GRB10-interacting GYF protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18007.18007.3 16.9 12.72 3.813 4 1 1 0 749.3959 2166.1993 S24s TMT10 15 (R) ALSGGGSVAsPPPSPAMPK (Y) ALS(0.0)GGGS(0.0)VAS(0.99)PPPS(0.0)PAMPK K:TMT10,s:Phosphorylated S GIGYF1 115112.8 3 1 1679.1 121.41 HUMAN 1 4.7251 0.0475 SGGKPGSSPITKHGL-p Q15648;S1156-p SGGKPGSSPITKHGL 0.698184520976541 0.619034492494264 0.0586666666666667 0.059 2.93258052106408 2.83067903947862 0.0586666666666667 0.059 0.509028323202712 0.5211132262755 0.706685058568236 0.68571318189163 Q15648 MED1 Q15648.S1156.p_MED1 Q15648_S1156s _1_1_1156_1156 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8302.8302.3 12.61 8.09 1.353 6 1 1 0 767.0814 2219.2599 S1156s TMT10 1145 (K) NSSQSGGKPGSsPITK (H) NS(0.0)S(0.0)QS(0.0)GGKPGS(0.0)S(0.99)PIT(0.0)K K:TMT10,s:Phosphorylated S MED1 169445 8 14 115.1 566.87 HUMAN 1 2.9326 2.8307 SGGKTTGTPPDSSLV-p Q13561;T198-p SGGKTTGTPPDSSLV 0.476938518658867 0.954500469810866 0.0953333333333333 0.00800000000000003 5.91636819572284 0.288211334771687 0.0948499320576327 0.00800000000000004 0.256072640906098 0.935791005360372 1.26965092628038 0.0843685330353916 Q13561 DCTN2 Q13561.T198.p_DCTN2 Q13561_T198t _1_1_198_198 Q13561 Q13561-2|Q13561-3|F8W1I6 Dynactin subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14403.14403.5 23.84 17.61 2.237 9 1 1 0 754.5862 3688.9385 T198t TMT10 189 (K) GGSGGKTTGtPPDSSLVTYELHSRPEQDK (F) GGS(0.0)GGKT(0.0)T(0.0)GT(0.99)PPDS(0.0)S(0.0)LVT(0.0)Y(0.0)ELHS(0.0)RPEQDK K:TMT10,t:Phosphorylated T DCTN2 44344.3 10 4 1016.1 188.09 HUMAN 1 5.9164 0.2882 SGGPQNLSGPGGRER-p Q9H0W8;S32-p SGGPQNLSGPGGRER 0.989020433252707 0.322861970291187 -0.00233333333333334 -0.105666666666667 0.0988203171733009 6.49106368603002 -0.00233333333333333 -0.105666666666667 0.977502705921002 0.224333241332626 -0.0295270197438599 -1.37124657425652 Q9H0W8 SMG9 Q9H0W8.S32.p_SMG9 Q9H0W8_S32s _1_1_32_32 Q9H0W8 Q9H0W8|Q9H0W8-2 Protein SMG9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12573.12573.3 18.95 18.95 7.717 2 1 1 0 773.7264 2239.1984 S32s TMT10 20 (R) WKEPGSGGPQNLsGPGGR (E) WKEPGS(0.0)GGPQNLS(0.99)GPGGR K:TMT10,s:Phosphorylated S SMG9 57877.9 6 2 1449.1 140.87 HUMAN 1 -0.0988 -6.4911 SGGRATPSPNSRLER-p O95613;S3284-p SGGRATPSPNSRLER 0.387197491638052 0.235869015216302 0.154666666666667 -0.124333333333333 7.62155343828069 8.26021257659512 0.154666666666667 -0.124333333333333 0.172919772772625 0.149272134270852 1.56943271072499 -1.67972221234021 O95613 PCNT O95613.S3284.p_PCNT O95613_S3284s _1_1_3284_3284 O95613 O95613|O95613-2 Pericentrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5377.5377.3 7.22 7.22 2.126 3 1 1 0 512.9291 1456.807 S3284s TMT10 3281 (R) ATPsPNSRLER (S) AT(0.0)PS(0.99)PNS(0.0)RLER s:Phosphorylated S PCNT 380826.2 2 20 222.1 428 HUMAN 1 7.6216 -8.2602 SGGSGFRSPHLWKKS-p P00519-2;S702-p SGGSGFRSPHLWKKS 0.64684633129603 0.874067257969815 0.0873333333333333 -0.029 3.54362890062557 0.823001699336003 0.0873333333333333 -0.029 0.442218706512723 0.827370115277693 0.828822660297223 -0.22884929067913 P00519 ABL1 P00519.2.S702.p_ABL1 P00519-2_S702s _1_1_702_702 P00519-2 P00519-2 Isoform IB of Tyrosine-protein kinase ABL1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12703.12703.5 16.38 16.38 1.121 3 1 1 0 488.8686 2360.3442 S702s TMT10 694 (R) ESGGSGFRsPHLWKK (S) ES(0.0)GGS(0.0)GFRS(0.99)PHLWKK K:TMT10,s:Phosphorylated S ABL1 125637.1 3 8 347.1 352.28 HUMAN 1 3.5436 -0.823 SGGSGSDSEPDSPVF-p P36956-4;S487-p SGGSGSDSEPDSPVF 0.177952626351024 0.600375904153485 0.394 0.054 14.8349276979949 3.00328049659385 0.394 0.054 0.0328478712821058 0.500808798653812 2.84754868003651 0.720977270401992 P36956 SREBF1 P36956.4.S487.p_SREBF1 P36956-4_S485sS487s_2_2_485_487 P36956-4 P36956-4|P36956-2|P36956-3|B5MD58|P36956-5 Isoform 4 of Sterol regulatory element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17621.17621.3 17.75 17.75 2.296 7 2 2 0 901.7132 2543.1786 S485s S487s TMT10 477 (R) GSGSGGSGsDsEPDSPVFEDSK (A) GS(0.0)GS(0.0)GGS(0.0)GS(0.99)DS(0.99)EPDS(0.0)PVFEDS(0.0)K K:TMT10,s:Phosphorylated S SREBF1 125717 1 3 4120.1 37.21 HUMAN 1 14.8349 3.0033 SGGSLFGSPPTSVPP-p Q641Q2;S704-p SGGSLFGSPPTSVPP 0.048419304614536 0.0477102565539202 -0.455666666666667 -0.245666666666667 29.1044153238724 17.6737307084101 -0.455666666666667 -0.245666666666667 0.00122901863410731 0.0170854699590696 -6.16420053933534 -3.39381790910305 Q641Q2 FAM21A Q641Q2.S704.p_FAM21A Q641Q2_S704s _1_1_704_704 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q9Y4E1-3|J3KP36|F8W7U3|A0A087WYF6|Q9Y4E1-5|Q641Q2-2|Q9Y4E1-4|Q9Y4E1-2|E7ESD2|Q9Y4E1-6 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.36057.36452.3 29.79 24.53 3.103 7 1 1 0 1119.9017 3277.7244 S704s TMT10 687 (R) VSLLFEDDVDSGGSLFGsPPTSVPPATK (K) VS(0.0)LLFEDDVDS(0.0)GGS(0.0)LFGS(0.99)PPT(0.0)S(0.0)VPPAT(0.0)K K:TMT10,s:Phosphorylated S WASHC2A 147352.2 10 42 12.1 1178.3 HUMAN 1 -29.1044 -17.6737 SGGSSEPSPTEVDVS-p Q6PIJ6;S740-p SGGSSEPSPTEVDVS 0.0558640413719207 0.333220772237698 -0.423333333333333 -0.132333333333333 27.3218852589265 6.32539271683152 -0.423333333333333 -0.132333333333333 0.001852727185679 0.233056236140778 -5.65691182544316 -1.34199356343741 Q6PIJ6 FBXO38 Q6PIJ6.S740.p_FBXO38 Q6PIJ6_S740s _1_1_740_740 Q6PIJ6 Q6PIJ6|Q6PIJ6-2 F-box only protein 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10775.10775.2 19.84 19.84 1.932 7 1 1 0 1107.5109 2134.0461 S740s TMT10 730 (R) TVNSGGSSEPsPTEVDVSR (Q) T(0.0)VNS(0.0)GGS(0.0)S(0.0)EPS(0.99)PT(0.0)EVDVS(0.0)R s:Phosphorylated S FBXO38 135824.2 1 2 2435.1 83.55 HUMAN 1 -27.3219 -6.3254 SGGSSTNSLTGSRPP-p Q5T9C2;S189-p SGGSSTNSLTGSRPP 0.188778224113783 0.39098681143098 -0.270666666666667 -0.107 14.1869607013802 5.42247381661805 -0.270666666666667 -0.107 0.0381332595879428 0.286914580130778 -2.72730980487252 -1.18069007829472 Q5T9C2 FAM102A Q5T9C2.S189.p_FAM102A Q5T9C2_S189s _1_1_189_189 Q5T9C2 Q5T9C2|Q5T9C2-2|Q5T9C2-3 Protein FAM102A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6663.6663.3 17.88 17.88 2.145 9 1 1 0 810.7381 2350.2363 S189s TMT10 177 (K) GGGTSSGGSSTNsLTGSRPPK (A) GGGT(0.0)S(0.0)S(0.0)GGS(0.0)S(0.0)T(0.0)NS(0.99)LT(0.0)GS(0.0)RPPK K:TMT10,s:Phosphorylated S FAM102A 42240.5 4 2 2072.1 99.26 HUMAN 1 -14.187 -5.4225 SGGVDLDSSGEFASI-p Q92766;S1174-p SGGVDLDSSGEFASI 0.314605425744953 0.255601482862994 -0.174 -0.118166666666667 9.39598912387393 7.80381931257237 -0.174 -0.118166666666667 0.114921447520109 0.165812805978957 -1.87693536854352 -1.60061474357482 Q92766 RREB1 Q92766.S1174.p_RREB1 Q92766_S1174sS1175s_2_2_1174_1175 Q92766 Q92766-2|Q92766-3|Q92766-5|A0A087X055 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24295.24295.2 17.69 17.69 5.114 4 2 2 0 1251.0648 2341.1924 S1174s S1175s TMT10 1165 (R) ANSGGVDLDssGEFASIEK (M) ANS(0.0)GGVDLDS(0.99)S(0.99)GEFAS(0.0)IEK K:TMT10,s:Phosphorylated S RREB1 184269.8 4 33 179.1 480.48 HUMAN 2 -9.396 -7.8038 SGIYPPGSPGK____-p O95295;S133-p SGIYPPGSPGK____ 0.771545626217162 0.018442201631359 -0.0406666666666667 -0.416333333333333 2.16048327006279 23.8656914947538 -0.0406666666666667 -0.416333333333333 0.608067333578273 0.00410611256097926 -0.54405602475516 -4.75652106848863 O95295 SNAPIN O95295.S133.p_SNAPIN O95295_S133s _1_1_133_133 O95295 O95295 SNARE-associated protein Snapin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21718.21718.2 19 19 5.311 3 1 1 0 1014.5172 1948.0614 S133s TMT10 122 (R) AMLDSGIYPPGsPGK (-) AMLDS(0.0)GIY(0.0)PPGS(0.99)PGK K:TMT10,s:Phosphorylated S SNAPIN 14930.8 20 4 3118.1 60.29 HUMAN 1 -2.1605 -23.8657 SGKAGCFSPKISHKE-p Q6P4F7;S422-p SGKAGCFSPKISHKE 0.615350842498504 0.000952253650599092 0.0716666666666667 -1.561 3.9123950859221 57.9399920029347 0.0716666666666667 -1.561 0.406219241971463 1.60694421202492e-06 0.900346399426369 -22.0870866629216 Q6P4F7 ARHGAP11A Q6P4F7.S422.p_ARHGAP11A Q6P4F7_S422s _1_1_422_422 Q6P4F7 Q6P4F7|Q6P4F7-3|Q6P4F7-2|H3BR51 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11766.11766.2 10.44 5.46 99 1 1 1 0 652.8273 1224.6811 S422s TMT10 418 (K) AGCFsPK (I) AGCFS(1.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARHGAP11A 114948.2 2 3 414.1 321.53 HUMAN 1 3.9124 -57.94 SGKHYGVYSCEGCKG-p P28702-3;Y220-p SGKHYGVYSCEGCKG 0.0649352658370469 0.0829283633876042 0.404333333333333 0.384333333333333 25.7004995407934 14.3157155425068 0.404333333333333 0.384333333333333 0.00269122523192821 0.0370193207434608 5.22340777376013 2.74937631601507 P28702 RXRB P28702.3.Y220.p_RXRB P28702-3_Y220y _1_1_220_220 P28702-3 P28702-3|P48443 Isoform 2 of Retinoic acid receptor RXR-beta GG20160819_MSz_CCLE_T4D7_pY_Injection_01.9466.9466.3 22.93 22.93 6.59 3 1 1 0 633.2849 1817.8715 Y220y TMT10 216 (K) HYGVySCEGCK (G) HY(0.0)GVY(0.99)S(0.0)CEGCK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y RXRB 58277.3 2 1 145.1 22.93 HUMAN 1 25.7005 14.3157 SGKKSYLSGGAGAAG-p P25490;S187-p SGKKSYLSGGAGAAG 0.733191468551962 0.219437691927096 -0.055 -0.198 2.55119494867019 8.67113502236553 -0.055 -0.198 0.555751322867116 0.135795849971115 -0.627681752586325 -1.75083075210966 P25490 YY1 P25490.S187.p_YY1 P25490_S187s _1_1_187_187 P25490 P25490 Transcriptional repressor protein YY1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12817.12817.3 19.25 17.87 2.119 3 1 1 0 734.6913 2122.0929 S187s TMT10 184 (K) SYLsGGAGAAGGGGADPGNK (K) S(0.0)Y(0.0)LS(0.99)GGAGAAGGGGADPGNK K:TMT10,s:Phosphorylated S YY1 45168.2 1 2 1217.1 165.22 HUMAN 1 -2.5512 -8.6711 SGKNMRLSSLALSSF-p P98198-3;S1183-p SGKNMRLSSLALSSF 0.290988380713952 0.387368896424247 -0.148333333333333 -0.0983333333333333 10.1068700449736 5.47542675354508 -0.148333333333333 -0.0983333333333333 0.0975692564827326 0.28343751038042 -2.00028371189585 -1.19025283195588 P98198 ATP8B2 P98198.3.S1183.p_ATP8B2 P98198-3_S1183s _1_1_1183_1183 P98198-3 P98198-3 Isoform 3 of Phospholipid-transporting ATPase ID HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25695.25695.3 13.44 13.44 1.195 6 1 1 0 665.0096 1913.0476 S1183s TMT10 1179 (K) NMRLsSLALSSFTTR (S) NMRLS(0.99)S(0.0)LALS(0.0)S(0.0)FT(0.0)T(0.0)R s:Phosphorylated S ATP8B2 140028.6 2 1 4598.1 29 HUMAN 1 -10.1069 -5.4754 SGKTTPNSGDVQVTE-p P35269;S449-p SGKTTPNSGDVQVTE 0.048419304614536 0.00204409866863737 0.455333333333333 0.899666666666667 29.1140348478724 41.8942024977276 0.455333333333333 0.899666666666667 0.00122629939841942 6.46516704051104e-05 6.16703055771972 11.0170476653019 P35269 GTF2F1 P35269.S449.p_GTF2F1 P35269_S449s_1_1_449_449 P35269 P35269 General transcription factor IIF subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10897.10897.3 7.98 6.9 1.161 7 1 1 0 1088.5535 3182.6806 N448n S449s TMT10 436 (K) STPQPPSGKTTPnsGDVQVTEDAVRR (Y) S(0.0)T(0.0)PQPPS(0.0)GKT(0.0)T(0.0)PN(1.0)S(0.99)GDVQVT(0.0)EDAVRR K:TMT10,n:Deamidated,s:Phosphorylated S GTF2F1 58296.5 1 11 1159.1 171.17 HUMAN 1 29.114 41.8942 SGLGTPLTPPKMKLN-p Q8TBC3;T696-p SGLGTPLTPPKMKLN 0.407186408153387 0.00930957946811404 0.186333333333333 -0.424 7.20732919819371 28.6761352315615 0.186333333333333 -0.424 0.190224775480113 0.00135639592649995 1.49725852019222 -6.03022332091718 Q8TBC3 SHKBP1 Q8TBC3.T696.p_SHKBP1 Q8TBC3_T696t _1_1_696_696 Q8TBC3 Q8TBC3|M0R2P6 SH3KBP1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21492.21492.3 13.11 13.11 2.939 5 1 1 0 821.7737 2383.3335 T696t Hydrogen 679 (R) RPPTPAPWPSSGLGTPLtPPK (M) RPPT(0.0)PAPWPS(0.0)S(0.0)GLGT(0.0)PLT(0.99)PPK K:TMT10-Lys-Only,t:Phosphorylated T SHKBP1 76969.9 2 2 417.2 320.81 HUMAN 1 7.2073 -28.6761 SGLHRTYSQDCSFKN-p Q86U86;S948-p SGLHRTYSQDCSFKN 0.685814166852822 0.0137597280500031 -0.057 0.418333333333333 3.07372507936697 25.8583594572238 -0.057 0.418333333333333 0.49275097474821 0.00259515949571825 -0.735347321869869 5.25765193526895 Q86U86 PBRM1 Q86U86.S948.p_PBRM1 Q86U86_S948s _1_1_948_948 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-9|Q86U86-3|Q86U86-7|Q86U86-4|Q86U86-5 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12449.12449.2 12.54 12.54 2.429 4 1 1 0 837.3865 1593.7983 S948s TMT10 946 (R) TYsQDCSFK (N) T(0.0)Y(0.0)S(0.99)QDCS(0.0)FK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PBRM1 194199.5 4 15 194.1 462.54 HUMAN 1 -3.0737 25.8584 SGLPGRRSPVGGGGP-p Q96CN9;S620-p SGLPGRRSPVGGGGP 0.955092767066371 0.46500244647022 0.0303333333333334 0.228333333333333 0.391819347719127 4.43464082264382 0.0303333333333334 0.228333333333333 0.913730381082247 0.360193538480595 0.113494600676199 0.999168963824254 Q96CN9 GCC1 Q96CN9.S620.p_GCC1 Q96CN9_S620s _1_1_620_620 Q96CN9 Q96CN9 GRIP and coiled-coil domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.37239.37239.4 32.77 28.84 5.305 9 1 1 0 1097.5159 4307.0739 S620s Hydrogen 620 (R) sPVGGGGPGDPADTSSSDSLTQALQLAAANEPTFFLYAEQLAR (K) S(0.99)PVGGGGPGDPADT(0.0)S(0.0)S(0.0)S(0.0)DS(0.0)LT(0.0)QALQLAAANEPT(0.0)FFLY(0.0)AEQLAR s:Phosphorylated S GCC1 88037.3 5 2 3490.1 49.82 HUMAN 1 0.3918 4.4346 SGLQIQKSPEPEVLS-p Q12888-2;S299-p SGLQIQKSPEPEVLS 0.57894728698726 0.021045775789504 0.0766666666666667 0.335 4.36507354366488 22.9338642230567 0.0766666666666667 0.335 0.366009742476591 0.00508877885162063 0.986301588508063 4.53375147095393 Q12888 TP53BP1 Q12888.2.S299.p_TP53BP1 Q12888-2_S299s _1_1_299_299 Q12888-2 Q12888|A6NNK5|Q12888-2|Q12888-3 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.31133.31133.4 32.45 33.92 2.678 6 1 1 0 1211.6082 4763.454 S299s TMT10 282 (K) EQLSAQELMESGLQIQKsPEPEVLSTQEDLFDQSNK (T) EQLS(0.0)AQELMES(0.0)GLQIQKS(0.99)PEPEVLS(0.0)T(0.0)QEDLFDQS(0.0)NK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 51 12 3.1 2297.07 HUMAN 1 4.3651 22.9339 SGLQRRNSSEASSGD-p Q9UK76;S87-p SGLQRRNSSEASSGD 0.16541735067902 0.0291023937200316 -0.235 0.36 15.6385614456141 20.7934481403499 -0.235 0.36 0.0272988187746751 0.00833019534755408 -2.99909391322253 4.04735955881434 Q9UK76 HN1 Q9UK76.S87.p_HN1 Q9UK76_S87s _1_1_87_87 Q9UK76 Q9UK76-2|Q9UK76-3|J3KT51 Jupiter microtubule associated homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21820.21820.2 11.24 11.24 1.107 4 1 1 0 889.9063 1698.8384 S87s Hydrogen 86 (R) NsSEASSGDFLDLK (G) NS(0.99)S(0.0)EAS(0.0)S(0.0)GDFLDLK K:TMT10-Lys-Only,s:Phosphorylated S JPT1 16014.2 30 8 705.1 239.23 HUMAN 1 -15.6386 20.7934 SGLRDTVTPGELLKA-p A0A087X1U6;T568-p SGLRDTVTPGELLKA 0.300478673172259 0.131874636376236 -0.260666666666667 0.199333333333333 9.815283473465 11.6003157225918 -0.260666666666667 0.199333333333333 0.104345002225075 0.0691780678148259 -1.94963603774843 2.26055167999156 A0A087X1U6 EPPK1 A0A087X1U6.T568.p_EPPK1 A0A087X1U6_T568t _1_1_568_568 A0A087X1U6 P58107|A0A087X1U6|A0A075B730 Epiplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27744.27744.3 10.71 5.27 1.394 4 1 1 0 791.1075 2291.3375 T568t TMT10 558 (R) VTFSGLRDTVtPGELLK (A) VT(0.0)FS(0.0)GLRDT(0.0)VT(0.99)PGELLK K:TMT10,t:Phosphorylated T EPPK1 558101.4 1 4 680.1 245.5 HUMAN 1 -9.8153 11.6003 SGLRRAFSWLRGKRR-p Q9P206-2;S39-p SGLRRAFSWLRGKRR 0.703621330842431 0.458612029104725 0.227333333333333 -0.129666666666667 2.86878484233409 4.51344529861282 0.227333333333333 -0.129666666666667 0.516560882991553 0.353716623055386 0.69363263911738 -1.01389985408965 Q9P206 KIAA1522 Q9P206.2.S39.p_KIAA1522 Q9P206-2_S39s _1_1_39_39 Q9P206-2 Q9P206-2 Isoform 2 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18368.18368.3 8.09 8.09 99 1 1 1 0 415.5554 1164.6839 S39s TMT10 36 (R) RAFsWLR (G) RAFS(1.0)WLR s:Phosphorylated S KIAA1522 113458.9 1 1 62.2 704.36 HUMAN 1 2.8688 -4.5134 SGLRRRGSDPASGEV-p Q8WWA1;S137-p SGLRRRGSDPASGEV 0.761380727443584 0.138615217917896 0.042 -0.16 2.27079680955093 11.3052891235058 0.042 -0.16 0.59281654925741 0.074040797452087 0.567970519669282 -2.20865452528137 Q8WWA1 TMEM40 Q8WWA1.S137.p_TMEM40 Q8WWA1_S137s _1_1_137_137 Q8WWA1 Q8WWA1|Q8WWA1-2|Q8WWA1-3 Transmembrane protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8229.8229.3 20.15 15.7 5.658 3 1 1 0 656.6521 1887.9722 S137s TMT10 135 (R) RGsDPASGEVEASQLR (R) RGS(0.99)DPAS(0.0)GEVEAS(0.0)QLR s:Phosphorylated S TMEM40 25608.5 19 2 1848.1 111.18 HUMAN 1 2.2708 -11.3053 SGLRVLHSPPAVRRV-p Q9Y4B5;S1514-p SGLRVLHSPPAVRRV 0.500562123425219 0.0253160001297539 0.122 -0.553666666666667 5.54033258966316 21.7298899409805 0.122 -0.553666666666667 0.279232999195034 0.00671445868508848 1.20222022759941 -4.25600433349458 Q9Y4B5 MTCL1 Q9Y4B5.S1514.p_MTCL1 Q9Y4B5_S1514s _1_1_1514_1514 Q9Y4B5 Q9Y4B5|Q9Y4B5-3|Q9Y4B5-2|Q9Y4B5-4 Microtubule cross-linking factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9648.9862.3 15.71 12.66 99 1 1 1 0 428.9057 1204.7364 S1514s TMT10 1511 (R) VLHsPPAVR (R) VLHS(1.0)PPAVR s:Phosphorylated S MTCL1 210777.5 4 6 1389.1 147.22 HUMAN 1 5.5403 -21.7299 SGLTRTPSSEEISPT-p Q15311;S29-p SGLTRTPSSEEISPT 0.74959744833606 0.300245129802362 0.0846666666666666 0.159 2.38135537430751 6.89715407323027 0.0846666666666666 0.159 0.577915659602115 0.20430763316819 0.591692409764759 1.44260559259213 Q15311 RALBP1 Q15311.S29.p_RALBP1 Q15311_S29s _1_1_29_29 Q15311 Q15311|A0A1W2PRI7 RalA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11697.11697.2 9.23 6.9 1.136 5 1 1 0 857.4396 1633.9049 S29s TMT10 27 (R) TPsSEEISPTK (F) T(0.0)PS(0.99)S(0.0)EEIS(0.0)PT(0.0)K K:TMT10,s:Phosphorylated S RALBP1 76461.4 14 2 822.1 218.43 HUMAN 1 2.3814 6.8972 SGMEKYGSFEEAEAS-p O95425-2;S542-p SGMEKYGSFEEAEAS 0.5988039568714 0.452734613054459 -0.0803333333333333 0.0736666666666667 4.11579402132443 4.58638806939359 -0.0803333333333334 0.0736666666666667 0.38763287104895 0.347825319765079 -0.939200009978202 1.02749173780064 O95425 SVIL O95425.2.S542.p_SVIL O95425-2_S542s _1_1_542_542 O95425-2 O95425|O95425-3|O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23770.23770.2 15.87 15.87 4.753 4 1 1 0 1078.0001 2075.0283 S542s TMT10 540 (K) YGsFEEAEASYPILNR (A) Y(0.0)GS(0.99)FEEAEAS(0.0)Y(0.0)PILNR s:Phosphorylated S SVIL 202384.1 2 17 406.2 324.74 HUMAN 1 -4.1158 4.5864 SGMGARVSLQALEAE-p Q9P206-3;S226-p SGMGARVSLQALEAE 0.617684437816445 0.073737684616814 -0.074 -0.208666666666667 3.88353075987173 15.0325548154107 -0.074 -0.208666666666667 0.408928071140963 0.0313866177644003 -0.894799929805092 -2.88267301370219 Q9P206 KIAA1522 Q9P206.3.S226.p_KIAA1522 Q9P206-3_S226s _1_1_226_226 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34457.34457.3 24.98 24.95 24.976 2 1 1 0 876.0883 2546.2969 S226s TMT10 225 (R) VsLQALEAEAEAGAETEAMLQR (H) VS(0.99)LQALEAEAEAGAET(0.0)EAMLQR s:Phosphorylated S KIAA1522 108782.6 3 9 62.1 704.36 HUMAN 1 -3.8835 -15.0326 SGMSPRASPLPPPPP-p Q8NDT2;S113-p SGMSPRASPLPPPPP 0.953524163607394 0.794875925344772 0.009 0.031 0.406944462318544 1.39219525701379 0.009 0.031 0.910553679703149 0.725739020605891 0.117696299309191 0.36951730587481 Q8NDT2 RBM15B Q8NDT2.S113.p_RBM15B Q8NDT2_S113s _1_1_113_113 Q8NDT2 Q8NDT2 Putative RNA-binding protein 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17955.17955.3 22.22 18.39 5.027 4 1 1 0 1007.1517 2939.4811 S113s Hydrogen 112 (R) AsPLPPPPPPPGAEPACPGSSAAAPEYK (T) AS(0.99)PLPPPPPPPGAEPACPGS(0.0)S(0.0)AAAPEY(0.0)K C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S RBM15B 97489 3 3 199.1 454.11 HUMAN 1 0.4069 1.3922 SGNDSDGSEPSEKRT-p O75419-3;S151-p SGNDSDGSEPSEKRT 0.880940674436184 0.640522626625036 -0.0276666666666667 0.0466666666666667 1.08361711403705 2.63507909157384 -0.0276666666666667 0.0466666666666667 0.779180882815227 0.545119968141912 -0.294723356786467 0.645181053664832 O75419 CDC45 O75419.3.S151.p_CDC45 O75419-3_S144sS148sS151s_3_3_144_151 O75419-3 O75419-3|O75419-2 Isoform 3 of Cell division control protein 45 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30287.30287.5 13.1 13.1 1.401 5 3 3 0 1105.2893 5281.4911 S144s N146n S148s S151s TMT10 117 (K) LLIKQDDDLEVPAYEDIFRDEEEDEEHsGnDsDGsEPSEK (R) LLIKQDDDLEVPAY(0.0)EDIFRDEEEDEEHS(0.99)GN(1.0)DS(0.99)DGS(0.99)EPS(0.0)EK K:TMT10,s:Phosphorylated S,n:Deamidated CDC45 69451.6 3 2 6210.1 13.1 HUMAN 1 -1.0836 2.6351 SGNISQKSDEEDFVK-p E7ETA6;S1950-p SGNISQKSDEEDFVK 0.21223423524631 0.796821947011772 -0.671666666666667 -0.185666666666667 12.9938730596457 1.37821187873852 -0.671666666666667 -0.185666666666667 0.0501894797620452 0.728079515110511 -2.50996293943297 -0.366193323631776 E7ETA6 PCM1 E7ETA6.S1950.p_PCM1 E7ETA6_S1950s _1_1_1950_1950 E7ETA6 Q15154|E7ETA6|Q15154-2 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25883.25883.4 16.24 15.9 99 1 1 1 0 633.3379 2450.3633 S1950s TMT10 1950 (K) sDEEDFVKVEDLPLK (L) S(1.0)DEEDFVKVEDLPLK K:TMT10,s:Phosphorylated S PCM1 229381.8 1 55 13.1 1159.95 HUMAN 1 -12.9939 -1.3782 SGNNKGVSPEPIHLK-p O00429-6;S139-p SGNNKGVSPEPIHLK 0.0782221681558717 0.994968639683149 -0.418333333333333 0.000666666666666667 23.6197880010043 0.0305901585762442 -0.418333333333333 0.000666666666666671 0.0043453143512021 0.992981104009388 -4.70249231206714 0.00920981793515082 O00429 DNM1L O00429.6.S139.p_DNM1L O00429-6_S139s _1_1_139_139 O00429-6 O00429-6|O00429-8|O00429-2 Isoform 6 of Dynamin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16057.16057.3 12.2 8.96 99 1 1 1 0 538.9718 1534.9357 S139s TMT10 137 (K) GVsPEPIHLK (I) GVS(1.0)PEPIHLK K:TMT10,s:Phosphorylated S DNM1L 83910.8 1 1 2824.1 69.19 HUMAN 1 -23.6198 0.0306 SGNRQEDTHGSDGDG-p Q8IY42;T276-p SGNRQEDTHGSDGDG 0.554565606315745 0.0181749418560776 0.0853333333333333 0.349333333333333 4.72751926360236 23.9627823693829 0.0853333333333333 0.349333333333333 0.336703843282001 0.00401533480289961 1.05387940681695 4.78014151447455 Q8IY42 C4orf19 Q8IY42.T276.p_C4orf19 Q8IY42_T276t_1_1_276_276 Q8IY42 Q8IY42 Uncharacterized protein C4orf19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37009.37009.5 30.77 30.77 1.546 5 1 1 0 1186.7196 5833.6216 M264m T276t TMT10 259 (K) GPVHAmPVVDSGNRQEDtHGSDGDGDGEIVDEDAAVAEALAALEAATAGEDLDETD (-) GPVHAM(1.0)PVVDS(0.0)GNRQEDT(0.99)HGS(0.0)DGDGDGEIVDEDAAVAEALAALEAAT(0.0)AGEDLDET(0.0)D m:Oxidized methionine,t:Phosphorylated T C4orf19 34254.4 2 8 703.1 239.48 HUMAN 1 4.7275 23.9628 SGNSQRRSPPATKRD-p Q9UGI0;S216-p SGNSQRRSPPATKRD 0.43606840550564 0.241069076171382 0.109 0.123666666666667 6.63663250241756 8.13916577848889 0.109 0.123666666666667 0.216938558350721 0.153491179047363 1.39724539136308 1.65875844076786 Q9UGI0 ZRANB1 Q9UGI0.S216.p_ZRANB1 Q9UGI0_S216s _1_1_216_216 Q9UGI0 Q9UGI0 Ubiquitin thioesterase ZRANB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.2980.2980.3 8.23 3.06 6.754 2 1 1 0 407.8937 1141.7003 S216s Hydrogen 215 (R) RsPPATKR (D) RS(0.99)PPAT(0.0)KR K:TMT10-Lys-Only,s:Phosphorylated S ZRANB1 82392.1 2 2 4566.1 29.74 HUMAN 1 6.6366 8.1392 SGPALKRSFEVEEVE-p Q9UHD8;S30-p SGPALKRSFEVEEVE 0.419598745385739 0.884700569219726 0.130666666666667 -0.0196666666666667 6.96217666753923 0.748441670648345 0.130666666666667 -0.0196666666666667 0.20127152317537 0.841697104038127 1.45439080114184 -0.20951009299893 Q9UHD8 SEPT9 Q9UHD8.S30.p_SEPT9 Q9UHD8_S30s _1_1_30_30 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2|Q9UHD8-7 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14195.14195.4 23.51 23.51 14.399 4 1 1 0 571.5266 2203.1192 S30s TMT10 30 (R) sFEVEEVETPNSTPPRR (V) S(0.99)FEVEEVET(0.0)PNS(0.0)T(0.0)PPRR s:Phosphorylated S SEPT9 65685.6 23 4 110.1 572.91 HUMAN 1 6.9622 -0.7484 SGPAPAHSLGDLKGS-p P81408-4;S575-p SGPAPAHSLGDLKGS 0.131504655206906 0.0196754678220892 -0.352 -0.325666666666667 18.2131775655963 23.4189169817432 -0.352 -0.325666666666667 0.0150897569072312 0.00455101536568066 -3.50553748022144 -4.64883346217714 P81408 FAM189B P81408.4.S575.p_FAM189B P81408-4_S575s _1_1_575_575 P81408-4 P81408-4 Isoform 3 of Protein FAM189B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22258.22258.3 17.13 17.13 7.366 2 1 1 0 732.0715 2114.2374 S575s TMT10 564 (K) VPLPSGPAPAHsLGDLK (G) VPLPS(0.0)GPAPAHS(0.99)LGDLK K:TMT10,s:Phosphorylated S FAM189B 73136.4 2 2 2672.1 74.31 HUMAN 1 -18.2132 -23.4189 SGPEGESSE______-p Q8NBR0;S392-p SGPEGESSE______ 0.213251150765665 0.861839640259032 0.296666666666667 -0.0216666666666667 12.9394687465961 0.910312261358905 0.296666666666667 -0.0216666666666667 0.0508221607279916 0.810902751172792 2.50016521556937 -0.251202930544861 Q8NBR0 TP53I13 Q8NBR0.S392.p_TP53I13 Q8NBR0_S391sS392s_2_2_391_392 Q8NBR0 Q8NBR0 Tumor protein p53-inducible protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15962.15962.3 9.03 9.03 6.555 4 2 2 0 804.0337 2250.1564 S391s S392s TMT10 375 (R) RRPLLPPTPDSGPEGEssE (-) RRPLLPPT(0.0)PDS(0.0)GPEGES(0.99)S(0.99)E s:Phosphorylated S TP53I13 42750.4 3 3 5674.1 17.31 HUMAN 1 12.9395 -0.9103 SGPERILSISADIET-p P61978-2;S89-p SGPERILSISADIET 0.746532044361936 0.871953721200884 0.0713333333333333 0.0186666666666667 2.40968997565258 0.839295208283983 0.0713333333333333 0.0186666666666667 0.574157447401034 0.82427187053469 0.597733849823548 0.233044386764437 P61978 HNRNPK P61978.2.S89.p_HNRNPK P61978-2_S89s _1_1_89_89 P61978-2 P61978-2|P61978-3 Isoform 2 of Heterogeneous nuclear ribonucleoprotein K HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36879.36879.3 17.2 17.2 3.844 3 1 1 0 794.4643 2301.4045 S89s Hydrogen 87 (R) ILsISADIETIGEILKK (I) ILS(0.99)IS(0.0)ADIET(0.0)IGEILKK K:TMT10-Lys-Only,s:Phosphorylated S HNRNPK 51312.6 2 3 595.1 264.01 HUMAN 1 2.4097 0.8393 SGPESGPTPASAEQN-p P49006;T187-p SGPESGPTPASAEQN 0.254996768567997 0.22817890664111 0.552333333333333 0.349 11.2878510544562 8.45356770176435 0.552333333333333 0.349 0.074338688439888 0.142772061315456 2.20661729533322 1.71319029627061 P49006 MARCKSL1 P49006.T187.p_MARCKSL1 P49006_T187t _1_1_187_187 P49006 P49006 MARCKS-related protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13342.13342.4 13.88 13.88 1.21 9 1 1 0 984.4221 3854.7162 T187t TMT10 158 (K) GAEASAASEEEAGPQATEPSTPSGPESGPtPASAEQNE (-) GAEAS(0.0)AAS(0.0)EEEAGPQAT(0.0)EPS(0.0)T(0.0)PS(0.0)GPES(0.0)GPT(0.99)PAS(0.0)AEQNE t:Phosphorylated T MARCKSL1 19585.5 1 15 402.1 327.42 HUMAN 1 11.2879 8.4536 SGPGAQNSPYQLRRK-p Q86XK2-5;S97-p SGPGAQNSPYQLRRK 0.223361512903295 0.200856639780602 0.252333333333333 0.174666666666667 12.5096039689373 9.17162125486672 0.252333333333333 0.174666666666667 0.0561099140062081 0.121014629225392 2.42306416592761 1.83740071085898 Q86XK2 FBXO11 Q86XK2.5.S97.p_FBXO11 Q86XK2-5_S97s _1_1_97_97 Q86XK2-5 Q86XK2-5 Isoform 5 of F-box only protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17767.17767.4 24.44 19.02 3.172 3 1 1 0 910.6631 3559.6557 S97s TMT10 72 (R) NNVGERDDDVPADMVAEESGPGAQNsPYQLR (R) NNVGERDDDVPADMVAEES(0.0)GPGAQNS(0.99)PY(0.0)QLR s:Phosphorylated S FBXO11 108402.3 2 1 4972.1 24.44 HUMAN 1 12.5096 9.1716 SGPGKFYSPLPNDQL-p Q9UIF8;S1541-p SGPGKFYSPLPNDQL 0.78030934257184 0.0919994443327988 -0.0556666666666667 0.239333333333333 2.07151081846393 13.7063574708283 -0.0556666666666667 0.239333333333333 0.620653084615255 0.0425955522192015 -0.524581021639493 2.63761952011944 Q9UIF8 BAZ2B Q9UIF8.S1541.p_BAZ2B Q9UIF8_S1541s _1_1_1541_1541 Q9UIF8 Q9UIF8|Q9UIF8-3|Q9UIF8-5 Bromodomain adjacent to zinc finger domain protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27940.27940.3 12.11 10.48 3.958 2 1 1 0 658.3576 1893.0886 S1541s TMT10 1539 (K) FYsPLPNDQLLK (T) FY(0.0)S(0.99)PLPNDQLLK K:TMT10,s:Phosphorylated S BAZ2B 242223.6 1 4 1765.1 116.68 HUMAN 1 -2.0715 13.7064 SGPGSRISSSSFSRV-p P05787;S34-p SGPGSRISSSSFSRV 0.974387172364495 0.862796545915633 -0.00500000000000001 0.0176666666666667 0.220519460330311 0.904883228303704 -0.00500000000000001 0.0176666666666667 0.950491098463268 0.811917079206138 -0.065021986006871 0.249821905852374 P05787 KRT8 P05787.S34.p_KRT8 P05787_S34s _1_1_34_34 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9951.10274.3 13.56 13.56 1.118 10 1 1 0 691.3266 1991.9984 S34s TMT10 24 (R) SYTSGPGSRIsSSSFSR (V) S(0.0)Y(0.0)T(0.0)S(0.0)GPGS(0.0)RIS(0.99)S(0.0)S(0.0)S(0.0)FS(0.0)R s:Phosphorylated S KRT8 53703.3 13 11 69.1 672.47 HUMAN 1 -0.2205 0.9049 SGPLKISSVSEVMKE-p Q16891-2;S113-p SGPLKISSVSEVMKE 0.340998799441524 0.0161274384525132 -0.132 0.446 8.68625282720131 24.75940961494 -0.132 0.446 0.135323965973444 0.00334240473983586 -1.75405261677314 4.97696547822377 Q16891 IMMT Q16891.2.S113.p_IMMT Q16891-2_S113s _1_1_113_113 Q16891-2 Q16891|Q16891-4|Q16891-2 Isoform 2 of MICOS complex subunit MIC60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20384.20384.2 11.32 6.03 1.123 3 1 1 0 759.4064 1437.8387 S113s TMT10 111 (K) ISsVSEVMK (E) IS(0.0)S(0.99)VS(0.0)EVMK K:TMT10,s:Phosphorylated S IMMT 83022.6 3 4 1057.1 182.65 HUMAN 1 -8.6863 24.7594 SGPNSADSANDGFVR-p P52597;S107-p SGPNSADSANDGFVR 0.209814655046862 0.0208431447184522 0.829333333333333 0.332333333333333 13.0929506389164 22.9923157528123 0.829333333333333 0.332333333333333 0.0490574461846004 0.00502074800909079 2.52782970024287 4.54752012398008 P52597 HNRNPF P52597.S107.p_HNRNPF P52597_S107s _1_1_107_107 P52597 P52597 Heterogeneous nuclear ribonucleoprotein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6474.6474.3 16.83 16.83 1.764 3 1 1 0 647.2889 1859.8834 S107s TMT10 99 (K) HSGPNSADsANDGFVR (L) HS(0.0)GPNS(0.0)ADS(0.99)ANDGFVR s:Phosphorylated S HNRNPF 46013.4 2 10 990.1 191.56 HUMAN 1 13.093 22.9923 SGPQRPHSFSEALRR-p Q6DT37;S1482-p SGPQRPHSFSEALRR 0.376028311938342 0.774969315446929 -0.12 -0.0426666666666666 7.85539736705582 1.5313379612601 -0.12 -0.0426666666666666 0.163855213158219 0.70285575285854 -1.61006552132461 -0.402273560152148 Q6DT37 CDC42BPG Q6DT37.S1482.p_CDC42BPG Q6DT37_S1482s _1_1_1482_1482 Q6DT37 Q6DT37 Serine/threonine-protein kinase MRCK gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7407.7407.4 18.59 18.59 2.821 3 1 1 0 484.4918 1854.9772 S1482s TMT10 1474 (R) GSGPQRPHsFSEALR (R) GS(0.0)GPQRPHS(0.99)FS(0.0)EALR s:Phosphorylated S CDC42BPG 173882.5 5 6 997.1 190.4 HUMAN 1 -7.8554 -1.5313 SGPRSTASDLTSSKA-p Q8IWE5;S253-p SGPRSTASDLTSSKA 0.297330507583042 0.920200840101043 0.168 -0.0116666666666666 9.91043855952425 0.509347498195025 0.168 -0.0116666666666666 0.102083639233842 0.889334725109931 1.96615468973949 -0.145815601762439 Q8IWE5 PLEKHM2 Q8IWE5.S253.p_PLEKHM2 Q8IWE5_S253s _1_1_253_253 Q8IWE5 Q8IWE5|Q5VVD7 Pleckstrin homology domain-containing family M member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10114.10114.2 12.1 12.1 1.182 6 1 1 0 767.8921 1454.8103 S253s TMT10 250 (R) STAsDLTSSK (A) S(0.0)T(0.0)AS(0.99)DLT(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S PLEKHM2 114490 1 1 2834.1 68.64 HUMAN 1 9.9104 -0.5093 SGPSEDPSVNFLKNV-p Q13501;S233-p SGPSEDPSVNFLKNV 0.775124418170112 0.00577906652466547 -0.0616666666666667 -0.53 2.11842800835709 32.3654276404239 -0.0616666666666667 -0.53 0.613984205404721 0.000580039054514013 -0.534871923662687 -7.17280083464352 Q13501 SQSTM1 Q13501.S233.p_SQSTM1 Q13501_S233s _1_1_233_233 Q13501 Q13501|E7EMC7|Q13501-2 Sequestosome-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17078.17078.3 17.1 10.7 5.201 5 1 1 0 1037.1775 3029.558 S233s TMT10 213 (R) AGEARPGPTAESASGPSEDPsVNFLK (N) AGEARPGPT(0.0)AES(0.0)AS(0.0)GPS(0.0)EDPS(0.99)VNFLK K:TMT10,s:Phosphorylated S SQSTM1 48485.1 2 6 541.1 276.49 HUMAN 1 -2.1184 -32.3654 SGPSESPSPPAAEEL-p P55884-2;S85-p SGPSESPSPPAAEEL 0.129751256844141 0.592245003928541 0.294 0.115 18.3558381535668 3.07834479963599 0.294 0.115 0.014602129128493 0.492227099482163 3.53464142993693 0.736175694652447 P55884 EIF3B P55884.2.S85.p_EIF3B P55884-2_S85s _1_1_85_85 P55884-2 P55884|P55884-2 Isoform 2 of Eukaryotic translation initiation factor 3 subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17238.17238.5 34.45 29.79 1.105 6 1 1 0 954.2437 4687.2233 S85s TMT10 68 (R) TEPAAEAEAASGPSESPsPPAAEELPGSHAEPPVPAQGEAPGEQAR (D) T(0.0)EPAAEAEAAS(0.0)GPS(0.0)ES(0.0)PS(0.99)PPAAEELPGS(0.0)HAEPPVPAQGEAPGEQAR s:Phosphorylated S EIF3B 99769.3 7 1 1156.1 171.77 HUMAN 1 18.3558 3.0783 SGPSPLSSPNGKLTV-p O75179;S1700-p SGPSPLSSPNGKLTV 0.936107507392066 0.00227084207720462 -0.0133333333333333 -0.756666666666667 0.558749055342801 40.8734437171074 -0.0133333333333333 -0.756666666666667 0.879275747518355 8.17816047677985e-05 -0.159211915133288 -10.5312892140325 O75179 ANKRD17 O75179.S1700.p_ANKRD17 O75179_S1699sS1700s_2_2_1699_1700 O75179 O75179|O75179-2|O75179-7|O75179-6|O75179-4 Ankyrin repeat domain-containing protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19828.19828.3 8.01 8.01 1.281 6 2 2 0 891.4703 2511.475 S1699s S1700s N1702n TMT10 1693 (K) SGPSPLssPnGKLTVASPK (R) S(0.0)GPS(0.0)PLS(0.99)S(0.99)PN(1.0)GKLT(0.0)VAS(0.0)PK K:TMT10,s:Phosphorylated S,n:Deamidated ANKRD17 276135.9 14 16 287.2 383.69 HUMAN 1 -0.5587 -40.8734 SGPSPPGSPGHDRER-p Q9BTU6;S51-p SGPSPPGSPGHDRER 0.280836423359022 0.232919094154321 0.266333333333333 -0.157666666666667 10.4275467980929 8.33332467920625 0.266333333333333 -0.157666666666667 0.0906244367155967 0.146780219248862 2.05609783080207 -1.69237964483731 Q9BTU6 PI4K2A Q9BTU6.S51.p_PI4K2A Q9BTU6_S51s _1_1_51_51 Q9BTU6 Q9BTU6 Phosphatidylinositol 4-kinase type 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5391.5391.4 16.64 16.64 2.366 3 1 1 0 571.2781 2202.1213 S51s TMT10 38 (R) VAAAAGSGPSPPGsPGHDRER (Q) VAAAAGS(0.0)GPS(0.0)PPGS(0.99)PGHDRER s:Phosphorylated S PI4K2A 54420.7 1 3 2560.1 78.53 HUMAN 1 10.4275 -8.3333 SGPTKTPSFHIKRPA-p O60890;S703-p SGPTKTPSFHIKRPA 0.796289087702069 0.115533842942246 -0.05 -0.269 1.91212230455266 12.3657115029855 -0.05 -0.269 0.643854550630641 0.0580001143373556 -0.489251732511611 -2.39613599081592 O60890 OPHN1 O60890.S703.p_OPHN1 O60890_S703s _1_1_703_703 O60890 O60890 Oligophrenin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16808.16808.4 15.86 15.86 1.128 5 1 1 0 698.8739 2712.511 S703s TMT10 688 (K) ATNGPMPGSGPTKTPsFHIK (R) AT(0.0)NGPMPGS(0.0)GPT(0.0)KT(0.0)PS(0.99)FHIK K:TMT10,s:Phosphorylated S OPHN1 92266.6 2 2 2894.1 66.64 HUMAN 1 -1.9121 -12.3657 SGPVGYDSEDELEES-p Q6NV74;S75-p SGPVGYDSEDELEES 0.538880734861638 0.128148562191972 0.0833333333333333 0.161 4.96000808245519 11.7659862899306 0.0833333333333333 0.161 0.319153191548173 0.0665888279798977 1.0967242408625 2.28977819497091 Q6NV74 KIAA1211L Q6NV74.S75.p_KIAA1211L Q6NV74_S75s _1_1_75_75 Q6NV74 Q6NV74 Uncharacterized protein KIAA1211-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21473.21473.3 23.88 23.88 2.328 6 1 1 0 1139.8649 3337.6233 S75s TMT10 61 (R) NEVIAIESGPVGYDsEDELEESRGTLGSR (A) NEVIAIES(0.0)GPVGY(0.0)DS(0.99)EDELEES(0.0)RGT(0.0)LGS(0.0)R s:Phosphorylated S KIAA1211L 102725.9 6 2 756.1 230.87 HUMAN 1 4.96 11.766 SGQALGKSGGGIVEP-p Q8N954;S91-p SGQALGKSGGGIVEP 0.120260347431319 0.476404816328505 -0.636333333333333 0.162666666666667 19.1192061192903 4.29480422352179 -0.636333333333333 0.162666666666667 0.0122484007685991 0.371979989344351 -3.69242027500046 0.97290486176887 Q8N954 GPATCH11 Q8N954.S91.p_GPATCH11 Q8N954_S91s _1_1_91_91 Q8N954 A0A0A0MSF9|Q8N954 G patch domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28414.28414.2 15.71 15.71 99 1 1 1 0 966.5534 1852.1308 S91s TMT10 91 (K) sGGGIVEPIPLNIK (T) S(1.0)GGGIVEPIPLNIK K:TMT10,s:Phosphorylated S GPATCH11 30483.6 2 2 4547.1 30.01 HUMAN 1 -19.1192 4.2948 SGQGDPGSNPNKRQR-p P14866;S298-p SGQGDPGSNPNKRQR 0.214979748495542 0.00775433628140887 0.268 -0.468 12.8676518029285 30.1261966548236 0.268 -0.468 0.0516695667156397 0.000971360266134966 2.48724561512176 -6.460314486448 P14866 HNRNPL P14866.S298.p_HNRNPL P14866_S298s _1_1_298_298 P14866 P14866|P14866-2 Heterogeneous nuclear ribonucleoprotein L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21826.21826.4 19.16 12.51 1.644 5 1 1 0 1065.5233 4179.1099 S298s TMT10 273 (R) LNVFKNDQDTWDYTNPNLSGQGDPGsNPNKR (Q) LNVFKNDQDT(0.0)WDY(0.0)T(0.0)NPNLS(0.0)GQGDPGS(0.99)NPNKR K:TMT10,s:Phosphorylated S HNRNPL 64759.2 4 5 846.1 213.74 HUMAN 1 12.8677 -30.1262 SGQKRSRSRSPHEAG-p Q9NTZ6;S422-p SGQKRSRSRSPHEAG 0.451852660250753 0.144894526954526 0.103333333333333 0.160166666666667 6.3670081597892 11.0496225248132 0.103333333333333 0.160166666666667 0.230833684666215 0.0785303887802768 1.34968981667524 2.16382445852406 Q9NTZ6 RBM12 Q9NTZ6.S422.p_RBM12 Q9NTZ6_S422sS424s_2_2_422_424 Q9NTZ6 Q9NTZ6 RNA-binding protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17252.17895.3 13.39 13.39 5.687 3 2 2 0 680.6392 1879.9686 S422s S424s Hydrogen 422 (R) sRsPHEAGFCVYLK (G) S(0.99)RS(0.99)PHEAGFCVY(0.0)LK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S RBM12 97622 37 3 2839.1 68.44 HUMAN 2 6.367 11.0496 SGQNAMGSQDSLLEI-p O75052;S371-p SGQNAMGSQDSLLEI 0.786231643290655 0.0254785458919158 0.047 0.318666666666667 2.01522361354204 21.6887552907313 0.047 0.318666666666667 0.628749479652398 0.00677835750821887 0.51217078512486 4.24670711846832 O75052 NOS1AP O75052.S371.p_NOS1AP O75052_S371s _1_1_371_371 O75052 O75052|O75052-3|O75052-2 Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30440.30440.4 20.94 20.94 2.237 4 1 1 0 594.7926 2296.1805 S371s TMT10 363 (K) LSGQNAMGsQDSLLEITFR (S) LS(0.0)GQNAMGS(0.99)QDS(0.0)LLEIT(0.0)FR s:Phosphorylated S NOS1AP 56491.1 9 6 1378.1 148.59 HUMAN 1 2.0152 21.6888 SGQTRYYSPCEEHPA-p A5YM69;S184-p SGQTRYYSPCEEHPA 0.233628206047255 0.685039050863407 -0.228 -0.0643333333333333 12.1085736285523 2.24977992646411 -0.228 -0.0643333333333333 0.0615378950994203 0.595692328760701 -2.3516074206288 -0.563365078150126 A5YM69 ARHGEF35 A5YM69.S184.p_ARHGEF35 A5YM69_S184s _1_1_184_184 A5YM69 A5YM69 Rho guanine nucleotide exchange factor 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6946.6946.3 20.2 20.2 2.434 6 1 1 0 940.3734 2739.1587 S184s Hydrogen 182 (R) YYsPCEEHPAETNQNEGAESGTIR (Q) Y(0.0)Y(0.0)S(0.99)PCEEHPAET(0.0)NQNEGAES(0.0)GT(0.0)IR C:Carbamidomethylation,s:Phosphorylated S ARHGEF35 53685.2 2 2 487.2 295.28 HUMAN 1 -12.1086 -2.2498 SGQVGSRSPSMISND-p Q86YT6;S805-p SGQVGSRSPSMISND 0.813072191749547 0.178565734299045 0.034 0.137666666666667 1.72810369307062 9.84238854749594 0.034 0.137666666666667 0.671722090176974 0.103695794931494 0.447709716113271 1.95356452133357 Q86YT6 MIB1 Q86YT6.S805.p_MIB1 Q86YT6_S805s _1_1_805_805 Q86YT6 Q86YT6 E3 ubiquitin-protein ligase MIB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20022.20022.4 21.46 15.93 1.17 8 1 1 0 1004.461 3934.8478 S805s TMT10 797 (K) VSGQVGSRsPSMISNDSETLEECMVCSDMKR (D) VS(0.0)GQVGS(0.0)RS(0.99)PS(0.0)MIS(0.0)NDS(0.0)ET(0.0)LEECMVCS(0.0)DMKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MIB1 112530.2 12 10 2088.1 98.03 HUMAN 1 1.7281 9.8424 SGRARAPSPGDYKSP-p P55198;S423-p SGRARAPSPGDYKSP 0.246620451673501 0.0194616458380096 -0.216 0.406 11.6299622313218 23.4949440134198 -0.216 0.406 0.0687074415171812 0.00447203916830125 -2.26686689155054 4.66704303445473 P55198 MLLT6 P55198.S423.p_MLLT6 P55198_S423s _1_1_423_423 P55198 P55198|A0A087WW39 Protein AF-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11399.11399.2 11.67 10.71 6.947 2 1 1 0 686.8495 1292.7251 S423s TMT10 421 (R) APsPGDYK (S) APS(0.99)PGDY(0.0)K K:TMT10,s:Phosphorylated S MLLT6 113557.5 4 5 1008.1 189 HUMAN 1 -11.63 23.4949 SGRDMPSTPPTPHSR-p Q9UBY0;T746-p SGRDMPSTPPTPHSR 0.545100783727678 0.136228682802852 -0.145666666666667 0.182666666666667 4.86342865277133 11.4071858444753 -0.145666666666667 0.182666666666667 0.326330100511406 0.0723238298104783 -1.0789702414231 2.22655798887811 Q9UBY0 SLC9A2 Q9UBY0.T746.p_SLC9A2 Q9UBY0_T746t _1_1_746_746 Q9UBY0 Q9UBY0 Sodium/hydrogen exchanger 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15357.15357.5 14.47 14.47 1.547 5 1 1 0 682.1272 3326.6298 T746t TMT10 729 (K) MEWKNEVDVDSGRDMPStPPTPHSR (E) MEWKNEVDVDS(0.0)GRDMPS(0.0)T(0.99)PPT(0.0)PHS(0.0)R K:TMT10,t:Phosphorylated T SLC9A2 92088.6 1 9 1290.1 157.7 HUMAN 1 -4.8634 11.4072 SGREKPDSDDDLDIA-p Q86V48;S659-p SGREKPDSDDDLDIA 0.80064254088907 0.0782971722290232 0.0796666666666667 -0.387 1.8593517703417 14.6808117568392 0.0796666666666667 -0.387 0.651725663631272 0.0340344568617981 0.477424173642412 -2.81700833354707 Q86V48 LUZP1 Q86V48.S659.p_LUZP1 Q86V48_S659s _1_1_659_659 Q86V48 Q86V48|Q86V48-3|Q86V48-2 Leucine zipper protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26432.26432.2 19.32 19.32 7.627 3 1 1 0 1350.2008 2619.4332 S659s TMT10 655 (R) EKPDsDDDLDIASLVTAK (L) EKPDS(0.99)DDDLDIAS(0.0)LVT(0.0)AK K:TMT10,s:Phosphorylated S LUZP1 120843.3 11 10 507.1 289.34 HUMAN 1 1.8594 -14.6808 SGREREGSLKGHTLA-p Q9Y6D5;S1024-p SGREREGSLKGHTLA 0.490692853704506 0.439230795161564 0.174 0.147 5.69495447849509 4.75947951163246 0.174 0.147 0.269466357689501 0.334235094657672 1.2300256982355 1.05958579506873 Q9Y6D5 ARFGEF2 Q9Y6D5.S1024.p_ARFGEF2 Q9Y6D5_S1024s _1_1_1024_1024 Q9Y6D5 Q9Y6D5 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5523.5523.3 7.65 2.19 99 1 1 1 0 452.9145 1276.7625 S1024s TMT10 1020 (R) EREGsLK (G) EREGS(1.0)LK K:TMT10,s:Phosphorylated S ARFGEF2 204545.1 5 7 205.1 448.88 HUMAN 1 5.695 4.7595 SGRFQAPSPSTLLRQ-p Q6P9B9;S1010-p SGRFQAPSPSTLLRQ 0.976750121529905 0.141712750487374 -0.00466666666666668 0.155333333333333 0.201419134907847 11.1821880839792 -0.00466666666666667 0.155333333333333 0.954680576090877 0.0761695152308948 -0.059511724166062 2.18705344211385 Q6P9B9 INTS5 Q6P9B9.S1010.p_INTS5 Q6P9B9_S1010s _1_1_1010_1010 Q6P9B9 Q6P9B9 Integrator complex subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25512.25512.3 10.08 10.08 3.009 3 1 1 0 509.2707 1445.8314 S1010s TMT10 1006 (R) FQAPsPSTLLR (Q) FQAPS(0.99)PS(0.0)T(0.0)LLR s:Phosphorylated S INTS5 109305.5 3 2 4740.1 27.25 HUMAN 1 -0.2014 11.1822 SGRGRKLSGDQITLP-p O00559-2;S36-p SGRGRKLSGDQITLP 0.394856068688803 0.457002200804006 0.177666666666667 0.075 7.4480040375854 4.53364064283607 0.177666666666667 0.075 0.179969784341838 0.352075606196003 1.53922821594988 1.01766708711528 O00559 EBAG9 O00559.2.S36.p_EBAG9 O00559-2_S36s _1_1_36_36 O00559-2 O00559-2|E9PND3 Isoform 2 of Receptor-binding cancer antigen expressed on SiSo cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28985.28985.5 23.77 19.81 2.213 12 1 1 0 1070.7483 5269.745 S36s TMT10 34 (R) KLsGDQITLPTTVDYSSVPKQTDVEEWTSWDEDAPTSVK (I) KLS(0.99)GDQIT(0.0)LPT(0.0)T(0.0)VDY(0.0)S(0.0)S(0.0)VPKQT(0.0)DVEEWT(0.0)S(0.0)WDEDAPT(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S EBAG9 29751.1 15 1 2390.1 85.52 HUMAN 1 7.448 4.5336 SGRGRQKSPAQSDST-p Q9UHB7;S549-p SGRGRQKSPAQSDST 0.124624583682506 0.323077596274766 0.278 0.1 18.8137958424685 6.48738389671513 0.278 0.1 0.013140757949878 0.224523400066267 3.62887562315855 1.37059777955528 Q9UHB7 AFF4 Q9UHB7.S549.p_AFF4 Q9UHB7_S549s _1_1_549_549 Q9UHB7 Q9UHB7|Q9UHB7-2 AF4/FMR2 family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3444.3444.3 13.18 9.68 2.269 5 1 1 0 658.001 1892.0238 S549s TMT10 547 (R) QKsPAQSDSTTQR (R) QKS(0.99)PAQS(0.0)DS(0.0)T(0.0)T(0.0)QR K:TMT10,s:Phosphorylated S AFF4 127856.3 10 11 137.1 525.98 HUMAN 1 18.8138 6.4874 SGRIICHSYLERLLN-p Q9NQS7;S357-p SGRIICHSYLERLLN 0.479127125332647 0.0937741407763109 0.114 -0.336666666666667 5.88069388178038 13.595897140877 0.114 -0.336666666666667 0.258184765024042 0.0436928411557525 1.26328090726306 -2.61750370621923 Q9NQS7 INCENP Q9NQS7.S357.p_INCENP Q9NQS7_S357s _1_1_357_357 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12796.12796.3 12.3 12.3 6.653 2 1 1 0 500.5809 1419.7616 S357s TMT10 353 (R) IICHsYLER (L) IICHS(0.99)Y(0.0)LER C:Carbamidomethylation,s:Phosphorylated S INCENP 105826.3 1 16 138.1 524.38 HUMAN 1 5.8807 -13.5959 SGRLDKASPDSRHSP-p O15119;S432-p SGRLDKASPDSRHSP 0.992582441628813 0.866252038171613 0.00233333333333333 -0.0173333333333333 0.0691750961479548 0.878506885427573 0.00233333333333332 -0.0173333333333333 0.984198027695281 0.816863162550693 0.02073780301126 -0.24309565622244 O15119 TBX3 O15119.S432.p_TBX3 O15119_S432s _1_1_432_432 O15119 O15119|O15119-2 T-box transcription factor TBX3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4648.4648.3 9.74 4.22 1.888 3 1 1 0 647.998 1862.0132 S432s TMT10 424 (R) DSGRLDKAsPDSR (H) DS(0.0)GRLDKAS(0.99)PDS(0.0)R K:TMT10,s:Phosphorylated S TBX3 79786.8 1 4 1589.1 129.37 HUMAN 1 0.0692 -0.8785 SGRLPLPSPALEYTL-p Q8IU81;S125-p SGRLPLPSPALEYTL 0.356258324670696 0.132572832170073 0.193333333333333 -0.175 8.33082731058657 11.5663717765673 0.193333333333333 -0.175 0.146864648073926 0.0697208739495279 1.69250718476257 -2.25457116264395 Q8IU81 IRF2BP1 Q8IU81.S125.p_IRF2BP1 Q8IU81_S125s _1_1_125_125 Q8IU81 Q8IU81 Interferon regulatory factor 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.31484.31484.3 12.56 12.56 6.302 4 1 1 0 641.678 1843.0527 S125s TMT10 121 (R) LPLPsPALEYTLGSR (L) LPLPS(0.99)PALEY(0.0)T(0.0)LGS(0.0)R s:Phosphorylated S IRF2BP1 62599.7 2 2 274.1 392.67 HUMAN 1 8.3308 -11.5664 SGRLRSPSNDSAHRS-p Q5T200;S1210-p SGRLRSPSNDSAHRS 0.416520725516141 0.0883087663456007 0.156333333333333 0.312666666666667 7.02044481215447 13.9511949771097 0.156333333333333 0.312666666666667 0.198589150839046 0.0402606240507743 1.46459149607096 2.68235987750758 Q5T200 ZC3H13 Q5T200.S1210.p_ZC3H13 Q5T200_S1208sS1210s_2_2_1208_1210 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4116.4116.3 9.17 9.17 1.136 3 2 2 0 543.577 1468.7818 S1208s S1210s TMT10 1206 (R) LRsPsNDSAHR (S) LRS(0.99)PS(0.99)NDS(0.0)AHR s:Phosphorylated S ZC3H13 197316.7 1 44 24.1 987.82 HUMAN 1 7.0204 13.9512 SGRPRQRSHILEDDE-p O75717;S374-p SGRPRQRSHILEDDE 0.0784181587076148 0.0237558606994797 -0.382 -0.316 23.59592697651 22.1510229738937 -0.382 -0.316 0.00436925409909688 0.00609393338680732 -4.69673406057258 -4.35190731220966 O75717 WDHD1 O75717.S374.p_WDHD1 O75717_S374s _1_1_374_374 O75717 O75717|O75717-2 WD repeat and HMG-box DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19061.19061.4 19.63 17.71 8.278 3 1 1 0 692.5998 2687.4075 S374s TMT10 372 (R) QRsHILEDDENSVDISMLK (T) Q(0.0)RS(0.99)HILEDDEN(0.0)S(0.0)VDIS(0.0)M(0.0)LK K:TMT10,s:Phosphorylated S WDHD1 127448.5 4 4 554.1 273.24 HUMAN 1 -23.5959 -22.151 SGRRAFGSGYRRDDD-p P23588;S283-p SGRRAFGSGYRRDDD 0.146674740935683 0.0742781148277095 0.436 -0.286666666666667 16.9560376447047 14.9875594746074 0.436 -0.286666666666667 0.0201556234182773 0.0317134910754286 3.25398104443513 -2.87424461054321 P23588 EIF4B P23588.S283.p_EIF4B P23588_S283s _1_1_283_283 P23588 E7EX17|P23588|P23588-2 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6952.6952.3 8.27 4.79 4.993 2 1 1 0 408.202 1142.6268 S283s TMT10 280 (R) AFGsGYRR (D) AFGS(0.99)GY(0.0)RR s:Phosphorylated S EIF4B 69207 3 8 146.1 516.36 HUMAN 1 16.956 -14.9876 SGRRSSPSPPPSEEK-p Q9Y5W9;S194-p SGRRSSPSPPPSEEK 0.299702423811655 0.0340474106016949 -0.33 0.265666666666667 9.83980978709572 19.7860264533005 -0.33 0.265666666666667 0.103757385862775 0.0105050313951808 -1.95389292139612 3.82964436583159 Q9Y5W9 SNX11 Q9Y5W9.S194.p_SNX11 Q9Y5W9_S192sS194s_2_2_192_194 Q9Y5W9 Q9Y5W9|Q9Y5W9-2|B4DJI7 Sorting nexin-11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8371.8371.2 9.18 6.6 1.124 4 2 2 0 880.4017 1599.863 S192s S194s TMT10 191 (R) SsPsPPPSEEK (D) S(0.0)S(0.99)PS(0.99)PPPS(0.0)EEK K:TMT10,s:Phosphorylated S SNX11 30889.3 7 5 2131.1 96.53 HUMAN 1 -9.8398 19.786 SGRTRHGSASQVQKQ-p P21359;S2817-p SGRTRHGSASQVQKQ 0.114002998190606 0.0137936499341328 0.308333333333333 -0.535666666666667 19.6675463044504 25.830451008255 0.308333333333333 -0.535666666666667 0.0107955648240257 0.00261189009947581 3.80796270041283 -5.2503876665235 P21359 NF1 P21359.S2817.p_NF1 P21359_S2817s _1_1_2817_2817 P21359 P21359|P21359-6|P21359-2 Neurofibromin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3624.3624.2 13.29 9.68 3.405 2 1 1 0 625.808 1170.6429 S2817s Hydrogen 2815 (R) HGsASQVQK (Q) HGS(0.99)AS(0.0)QVQK K:TMT10-Lys-Only,s:Phosphorylated S NF1 322961 4 17 437.1 312.53 HUMAN 1 19.6675 -25.8305 SGRVLGKSPGKTQLK-p B9EGE7;S841-p SGRVLGKSPGKTQLK 0.171136113251505 0.00171671240553537 -0.585 -1.07966666666667 15.2950481618524 43.8723670380755 -0.585 -1.07966666666667 0.0295457612300473 4.0998059009037e-05 -2.93397306339042 -12.018142456787 B9EGE7 NotFound B9EGE7.S841.p_NotFound B9EGE7_S841s _1_1_841_841 B9EGE7 B9EGE7|Q8TCN5 ZNF507 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11832.11832.3 7.26 7.26 99 1 1 1 0 518.3196 1472.9768 S841s TMT10 837 (R) VLGKsPGK (T) VLGKS(1.0)PGK K:TMT10,s:Phosphorylated S ZNF507 108208.7 1 2 4899.1 25.32 HUMAN 1 -15.295 -43.8724 SGSDGSPSPLLARRG-p Q9HCH0;S494-p SGSDGSPSPLLARRG 0.147946322560902 0.113740006812717 0.272 0.209 16.8436998406111 12.4509867234657 0.272 0.209 0.0206837850542802 0.0568723701300426 3.23191319774356 2.41133536758498 Q9HCH0 NCKAP5L Q9HCH0.S494.p_NCKAP5L Q9HCH0_S494s _1_1_494_494 Q9HCH0 Q9HCH0|Q9HCH0-3|Q9HCH0-2 Nck-associated protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11307.11307.3 13.74 13.74 3.14 4 1 1 0 556.2721 1586.8336 S494s TMT10 486 (R) NSGSDGSPsPLLAR (R) NS(0.0)GS(0.0)DGS(0.0)PS(0.99)PLLAR s:Phosphorylated S NCKAP5L 140323.1 3 7 609.1 261.98 HUMAN 1 16.8437 12.451 SGSERRLSGDLSSMP-p Q9NP71;S614-p SGSERRLSGDLSSMP 0.654531796805768 0.6684220242286 -0.06 -0.042 3.45002023220347 2.39379043789585 -0.06 -0.042 0.451853839346999 0.576263292434961 -0.810423805545112 -0.594271390033765 Q9NP71 MLXIPL Q9NP71.S614.p_MLXIPL Q9NP71_S614s _1_1_614_614 Q9NP71 Q9NP71|Q9NP71-3|Q9NP71-2|Q9NP71-4|Q9NP71-6|A0A0C4DG26 Carbohydrate-responsive element-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20301.20301.3 15.04 15.04 2.623 5 1 1 0 713.7 2059.1167 S614s TMT10 612 (R) RLsGDLSSMPGPGTLSVR (V) RLS(0.99)GDLS(0.0)S(0.0)MPGPGT(0.0)LS(0.0)VR s:Phosphorylated S MLXIPL 93755.5 2 13 1023.1 187.4 HUMAN 1 -3.45 -2.3938 SGSFKACSVAGSWVC-p Q6ZUM4;S182-p SGSFKACSVAGSWVC 0.199298505216404 0.492827529954649 0.216 -0.118 13.6378179915342 4.10844241559463 0.216 -0.118 0.0432731191835551 0.388289599945957 2.62665850409134 -0.937640530981367 Q6ZUM4 ARHGAP27 Q6ZUM4.S182.p_ARHGAP27 Q6ZUM4_S182s _1_1_182_182 Q6ZUM4 Q6ZUM4|A0A0G2JNY3|E9PIR1|A0A0G2JRG8|Q6ZUM4-3|Q6ZUM4-4 Rho GTPase-activating protein 27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17024.17024.2 16.56 16.56 3.257 2 1 1 0 829.8728 1578.7718 S182s TMT10 180 (K) ACsVAGSWVCPR (P) ACS(0.99)VAGS(0.0)WVCPR C:Carbamidomethylation,s:Phosphorylated S ARHGAP27 99078.8 5 5 467.1 303.27 HUMAN 1 13.6378 -4.1084 SGSGGSGSDSEPDSP-p P36956-4;S485-p SGSGGSGSDSEPDSP 0.177952626351024 0.600375904153485 0.394 0.054 14.8349276979949 3.00328049659385 0.394 0.054 0.0328478712821058 0.500808798653812 2.84754868003651 0.720977270401992 P36956 SREBF1 P36956.4.S485.p_SREBF1 P36956-4_S485sS487s_2_2_485_487 P36956-4 P36956-4|P36956-2|P36956-3|B5MD58|P36956-5 Isoform 4 of Sterol regulatory element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17621.17621.3 17.75 17.75 2.296 7 2 2 0 901.7132 2543.1786 S485s S487s TMT10 477 (R) GSGSGGSGsDsEPDSPVFEDSK (A) GS(0.0)GS(0.0)GGS(0.0)GS(0.99)DS(0.99)EPDS(0.0)PVFEDS(0.0)K K:TMT10,s:Phosphorylated S SREBF1 125717 1 3 4120.1 37.21 HUMAN 1 14.8349 3.0033 SGSGGSGSGGLIGLM-p P22681;S22-p SGSGGSGSGGLIGLM 0.975009344981545 0.280293869381939 0.00499999999999999 -0.111333333333333 0.21321644917231 7.27917734539624 0.00499999999999999 -0.111333333333333 0.952090770335888 0.187103652456877 0.062917732855958 -1.50936484795765 P22681 CBL P22681.S22.p_CBL P22681_S22s _1_1_22_22 P22681 P22681|A0A0U1RQX8|A0A0U1RR39 E3 ubiquitin-protein ligase CBL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20775.20775.3 10.32 10.32 1.129 6 1 1 0 911.8121 2653.4546 S22s TMT10 7 (K) KSSGAGGGSGSGGSGsGGLIGLMK (D) KS(0.0)S(0.0)GAGGGS(0.0)GS(0.0)GGS(0.0)GS(0.99)GGLIGLMK K:TMT10,s:Phosphorylated S CBL 100943.3 3 1 741.1 234.1 HUMAN 1 0.2132 -7.2792 SGSGKRLSGVSSVDS-p P57078;S420-p SGSGKRLSGVSSVDS 0.670948364346811 0.311466293111434 0.094 0.0973333333333333 3.24598154742342 6.69472362975309 0.094 0.0973333333333333 0.473589260336841 0.214056114047285 0.769946048006637 1.40709120044485 P57078 NotFound P57078.S420.p_NotFound P57078_S420s _1_1_420_420 P57078 P57078|P57078-2 Receptor-interacting serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16007.16007.3 15.08 15.08 4.205 6 1 1 0 621.9775 1783.95 S420s TMT10 418 (K) RLsGVSSVDSAFSSR (G) RLS(0.99)GVS(0.0)S(0.0)VDS(0.0)AFS(0.0)S(0.0)R s:Phosphorylated S RIPK4 92350.8 2 4 2665.1 74.56 HUMAN 1 3.246 6.6947 SGSKVSHSPALSSDV-p Q68CP9;S1496-p SGSKVSHSPALSSDV 0.275717902604065 0.0200510267309114 0.164666666666667 0.383 10.5862032296135 23.2738705218864 0.164666666666667 0.383 0.0873734887433364 0.00470557768688645 2.08376396478097 4.61422262744718 Q68CP9 ARID2 Q68CP9.S1496.p_ARID2 Q68CP9_S1496s _1_1_1496_1496 Q68CP9 Q68CP9|Q68CP9-3|F8WCU9|F8W108|F8VWP4 AT-rich interactive domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7019.7019.3 14.35 14.35 3.297 4 1 1 0 521.9285 1483.8066 S1496s TMT10 1493 (K) VSHsPALSSDVR (S) VS(0.0)HS(0.99)PALS(0.0)S(0.0)DVR s:Phosphorylated S ARID2 199041.9 2 5 1654.1 123.29 HUMAN 1 10.5862 23.2739 SGSLKKQSPKVTFEC-p P38398;S896-p SGSLKKQSPKVTFEC 0.0721955710812666 0.0350177201412657 -0.623 -0.556333333333333 24.5621754588447 19.5994132559709 -0.623 -0.556333333333333 0.00349769917123027 0.0109662634343096 -4.9337371272796 -3.79004648916214 P38398 BRCA1 P38398.S896.p_BRCA1 P38398_S896s _1_1_896_896 P38398 P38398-7|P38398-4|P38398-8|Q5YLB2 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11754.11759.4 12.25 8.51 3.091 2 1 1 0 652.111 2525.4567 S896s TMT10 894 (K) KQsPKVTFECEQK (E) KQS(0.99)PKVT(0.0)FECEQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BRCA1 210227.6 1 10 106.1 588.91 HUMAN 1 -24.5622 -19.5994 SGSLLTRSPTPAPFS-p A0A087WU18;S640-p SGSLLTRSPTPAPFS 0.152381872383781 0.0595039663553112 -0.275666666666667 -0.313666666666667 16.43798089511 16.3278480754913 -0.275666666666667 -0.313666666666667 0.0227092039390787 0.023292451102337 -3.1527454442059 -3.12912894551412 A0A087WU18 NotFound A0A087WU18.S640.p_NotFound A0A087WU18_S640s _1_1_640_640 A0A087WU18 Q99607|A0A087WU18 ETS-related transcription factor Elf-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32588.32588.3 14.33 13.94 1.247 5 1 1 0 704.033 2030.116 S640s Hydrogen 640 (R) sPTPAPFSPFNPTSLIK (M) S(0.99)PT(0.0)PAPFS(0.0)PFNPT(0.0)S(0.0)LIK K:TMT10-Lys-Only,s:Phosphorylated S ELF4 71367.2 1 4 3083.1 61.18 HUMAN 1 -16.438 -16.3278 SGSPKPFSPQLSAPI-p Q9ULU4-19;S522-p SGSPKPFSPQLSAPI 0.890068638318009 0.0418370804114387 0.02 0.257 0.987461968738047 18.4739051380503 0.02 0.257 0.796624764546523 0.01421050416336 0.270730430590321 3.55580946653904 Q9ULU4 ZMYND8 Q9ULU4.19.S522.p_ZMYND8 Q9ULU4-19_S522s _1_1_522_522 Q9ULU4-19 Q9ULU4-19|Q9ULU4-5|Q9ULU4-9|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-7|Q9ULU4-11|Q9ULU4-10|Q9ULU4-13|Q9ULU4-20|Q9ULU4-14|Q9ULU4-21|Q9ULU4-8|Q9ULU4-23|A0A087WYS3|Q9ULU4-17|Q9ULU4-6|Q9ULU4-3|A0A087WV57|Q9ULU4-4 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21869.21869.4 20.05 20.05 1.141 8 1 1 0 806.9454 3144.7872 S522s TMT10 508 (K) TGQAGSLSGSPKPFsPQLSAPITTK (T) T(0.0)GQAGS(0.0)LS(0.0)GS(0.0)PKPFS(0.99)PQLS(0.0)APIT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S ZMYND8 139738.7 3 9 57.1 712.18 HUMAN 1 0.9875 18.4739 SGSPSDNSGAEEMEV-p P31749;S129-p SGSPSDNSGAEEMEV 0.580132943065601 0.618949304320441 -0.0883333333333333 0.055 4.34855986118427 2.83149143811938 -0.0883333333333334 0.055 0.367404113053383 0.52101575506636 -0.983197863016805 0.685880234635963 P31749 AKT1 P31749.S129.p_AKT1 P31749_S129s _1_1_129_129 P31749 P31749|P31749-2 RAC-alpha serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17612.17612.4 20.14 20.14 2.909 5 1 1 0 722.6142 2807.47 S129s TMT10 122 (R) SGSPSDNsGAEEMEVSLAKPK (H) S(0.0)GS(0.0)PS(0.0)DNS(0.99)GAEEMEVS(0.0)LAKPK K:TMT10,s:Phosphorylated S AKT1 56084.8 6 3 1794.1 114.3 HUMAN 1 -4.3486 2.8315 SGSQAVPSPATRSEA-p Q12888-2;S635-p SGSQAVPSPATRSEA 0.486974176039615 0.068560310956675 0.112 0.262333333333333 5.75681292195246 15.4837020020337 0.112 0.262333333333333 0.265655436413089 0.0282897949617309 1.24111808432862 2.96765817838612 Q12888 TP53BP1 Q12888.2.S635.p_TP53BP1 Q12888-2_S635s _1_1_635_635 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19927.19927.5 24.61 24.61 1.718 6 1 1 0 686.7161 3349.5838 S635s TMT10 611 (K) GREETVAEDVCIDLTCDSGSQAVPsPATR (S) GREET(0.0)VAEDVCIDLT(0.0)CDS(0.0)GS(0.0)QAVPS(0.99)PAT(0.0)R C:Carbamidomethylation,s:Phosphorylated S TP53BP1 216167.2 8 30 3.1 2297.07 HUMAN 1 5.7568 15.4837 SGSRCSVSAVNLPKH-p Q3KQU3;S254-p SGSRCSVSAVNLPKH 0.227780752069412 0.20191700466613 0.201 0.138 12.3546203709112 9.14104955365141 0.201 0.138 0.0581484259270539 0.121869504293682 2.39539693644522 1.83211169930045 Q3KQU3 MAP7D1 Q3KQU3.S254.p_MAP7D1 Q3KQU3_S254s _1_1_254_254 Q3KQU3 Q3KQU3|Q3KQU3-4 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17081.17081.2 14.43 10.79 2.881 2 1 1 0 806.9298 1532.8871 S254s TMT10 251 (R) CSVsAVNLPK (H) CS(0.0)VS(0.99)AVNLPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP7D1 93160.6 5 7 160.1 495.56 HUMAN 1 12.3546 9.141 SGSRGRDSPYQSRGS-p Q13242;S204-p SGSRGRDSPYQSRGS 0.559128987934177 0.0545478476546813 0.128 0.284 4.65990116667413 16.8396324018741 0.128 0.284 0.341987225101717 0.0207031657834572 1.04134755245067 3.22868413987175 Q13242 SRSF9 Q13242.S204.p_SRSF9 Q13242_S204s _1_1_204_204 Q13242 Q13242 Serine/arginine-rich splicing factor 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.0443.0735.2 12.78 12.78 2.974 3 1 1 0 573.2401 1065.5072 S204s Hydrogen 201 (R) GRDsPYQSR (G) GRDS(0.99)PY(0.0)QS(0.0)R s:Phosphorylated S SRSF9 25655.9 8 3 2246.1 91.74 HUMAN 1 4.6599 16.8396 SGSRPDLSPSYEYDD-p O00139-4;S573-p SGSRPDLSPSYEYDD 0.959845672221263 0.53177361231964 0.0103333333333333 -0.061 0.344128714832502 3.68687200197686 0.0103333333333333 -0.061 0.923819507260228 0.427870948461772 0.100165373524507 -0.856643840830001 O00139 KIF2A O00139.4.S573.p_KIF2A O00139-4_S573s _1_1_573_573 O00139-4 O00139-4 Isoform 4 of Kinesin-like protein KIF2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28947.28947.4 28.78 28.78 1.14 12 1 1 0 1058.9856 4152.9512 S573s TMT10 552 (K) EFGISPSDIPFSQGSGSRPDLsPSYEYDDFSPSVTR (V) EFGIS(0.0)PS(0.0)DIPFS(0.0)QGS(0.0)GS(0.0)RPDLS(0.99)PS(0.0)Y(0.0)EY(0.0)DDFS(0.0)PS(0.0)VT(0.0)R s:Phosphorylated S KIF2A 84772.1 2 6 1020.1 187.91 HUMAN 1 0.3441 -3.6869 SGSRYYYSDNFFDGQ-p Q9H4B6;S136-p SGSRYYYSDNFFDGQ 0.539494846432312 0.0523931863384115 -0.11 0.348 4.95323124896194 17.0853777057117 -0.11 0.348 0.319651594471941 0.0195642061072498 -1.0954804625692 3.27695692890593 Q9H4B6 SAV1 Q9H4B6.S136.p_SAV1 Q9H4B6_S136s _1_1_136_136 Q9H4B6 Q9H4B6 Protein salvador homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21573.21573.2 13.29 13.29 4.046 4 1 1 0 942.3971 1803.8176 S136s TMT10 133 (R) YYYsDNFFDGQR (K) Y(0.0)Y(0.0)Y(0.0)S(0.99)DNFFDGQR s:Phosphorylated S SAV1 44747.2 3 4 2825.1 69.19 HUMAN 1 -4.9532 17.0854 SGSSKPNSPSISPSI-p Q99700;S861-p SGSSKPNSPSISPSI 0.183896650188356 0.11660422812589 -0.269666666666667 -0.189666666666667 14.4619198897861 12.3109248396341 -0.269666666666667 -0.189666666666667 0.0357938168052508 0.0587364258702307 -2.77812971983795 -2.38638132667802 Q99700 ATXN2 Q99700.S861.p_ATXN2 Q99700_S861s _1_1_861_861 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19748.19748.4 24.53 24.53 1.312 14 1 1 0 1091.5325 4283.1341 S861s TMT10 842 (K) DSFIENSSSNCTSGSSKPNsPSISPSILSNTEHK (R) DS(0.0)FIENS(0.0)S(0.0)S(0.0)NCT(0.0)S(0.0)GS(0.0)S(0.0)KPNS(0.99)PS(0.0)IS(0.0)PS(0.0)ILS(0.0)NT(0.0)EHK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATXN2 140907.9 4 22 176.1 481.52 HUMAN 1 -14.4619 -12.3109 SGSTKPGTPGNSPSS-p P78524;T364-p SGSTKPGTPGNSPSS 0.95908364921958 0.0391438999922893 0.0126666666666667 -0.261333333333333 0.351522756870494 18.8945610681365 0.0126666666666667 -0.261333333333333 0.922248004735989 0.0128986391501497 0.102240106816291 -3.64245412123768 P78524 ST5 P78524.T364.p_ST5 P78524_T364tS368s_2_2_364_368 P78524 P78524 Suppression of tumorigenicity 5 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9609.9609.5 10.49 10.49 2.405 8 2 2 0 621.5142 2943.6103 T364t S368s TMT10 355 (R) EGSGSTKPGtPGNsPSSQRLPSK (S) EGS(0.0)GS(0.0)T(0.0)KPGT(0.99)PGNS(0.99)PS(0.0)S(0.0)QRLPS(0.0)K K:TMT10,t:Phosphorylated T,s:Phosphorylated S ST5 127680.5 3 7 2234.1 92.43 HUMAN 1 0.3515 -18.8946 SGSTYTPSEAGNELD-p E9PSH4;S244-p SGSTYTPSEAGNELD 0.424465603303582 0.0235444509348884 -0.135 0.325666666666667 6.85988214633631 22.2046661510369 -0.135 0.325666666666667 0.206068583294894 0.00601912531079194 -1.43646334003749 4.3642183202562 E9PSH4 NotFound E9PSH4.S244.p_NotFound E9PSH4_S244s _1_1_244_244 E9PSH4 E9PSH4|Q9H063 Repressor of RNA polymerase III transcription MAF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26358.26358.4 22.41 22.41 4.173 8 1 1 0 896.639 3503.5693 S244s TMT10 235 (R) SISGSTYTPsEAGNELDMELGEEEVEEESR (S) S(0.0)IS(0.0)GS(0.0)T(0.0)Y(0.0)T(0.0)PS(0.99)EAGNELDMELGEEEVEEES(0.0)R s:Phosphorylated S MAF1 32485.4 2 5 1842.1 111.45 HUMAN 1 -6.8599 22.2047 SGSVLSHSNLEIKNL-p Q4KWH8;S1131-p SGSVLSHSNLEIKNL 0.115277012680993 0.415310346531125 0.410666666666667 0.0933333333333334 19.5362543575626 5.07645728269289 0.410666666666667 0.0933333333333334 0.0111269097174484 0.310709313728829 3.780124812382 1.1178221570694 Q4KWH8 PLCH1 Q4KWH8.S1131.p_PLCH1 Q4KWH8_S1131s_1_1_1131_1131 Q4KWH8 Q4KWH8|Q4KWH8-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23101.23101.3 14.34 14.34 1.469 5 1 1 0 741.7435 2142.2534 S1131s N1132n TMT10 1121 (K) SILSGSVLSHsnLEIK (N) S(0.0)ILS(0.0)GS(0.0)VLS(0.0)HS(0.99)N(1.0)LEIK K:TMT10,s:Phosphorylated S,n:Deamidated PLCH1 191330.6 1 10 201.1 451.38 HUMAN 1 19.5363 5.0765 SGSYSGRSPSPYGRR-p Q9NYV4-2;S323-p SGSYSGRSPSPYGRR 0.362969263101371 0.0300001465061648 0.138666666666667 0.300666666666667 8.17509248604698 20.6082758940377 0.138666666666667 0.300666666666667 0.152226671480101 0.00869305466430502 1.66552154501001 4.00683035654647 Q9NYV4 CDK12 Q9NYV4.2.S323.p_CDK12 Q9NYV4-2_S323sS325s_2_2_323_325 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5456.5456.3 7.08 7.08 1.837 7 2 2 0 616.2621 1686.8397 S323s S325s TMT10 316 (R) SGSYSGRsPsPYGR (R) S(0.0)GS(0.0)Y(0.0)S(0.0)GRS(0.99)PS(0.99)PY(0.0)GR s:Phosphorylated S CDK12 163853.1 4 39 59.1 708.76 HUMAN 1 8.1751 20.6083 SGTDGDESEEDPPEH-p Q96RS0;S412-p SGTDGDESEEDPPEH 0.159393285726736 0.614604205436038 -0.349 -0.0583333333333333 15.9696529781306 2.87348153328167 -0.349 -0.0583333333333333 0.0252950010741545 0.516002548606543 -3.06236550488187 -0.694500554764858 Q96RS0 TGS1 Q96RS0.S412.p_TGS1 Q96RS0_S405sT407tS412s_3_3_405_412 Q96RS0 Q96RS0 Trimethylguanosine synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6750.6750.5 12.36 11.28 12.361 4 3 3 0 709.7112 3304.6285 S405s T407t S412s TMT10 400 (K) DRPHAsGtDGDEsEEDPPEHKPSK (L) DRPHAS(0.99)GT(0.99)DGDES(0.99)EEDPPEHKPS(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T TGS1 97473.9 2 12 1387.1 147.41 HUMAN 1 -15.9697 -2.8735 SGTERPQSPGSSKAP-p Q8IYD8;S34-p SGTERPQSPGSSKAP 0.304889204560792 0.0594223545600391 -0.370333333333333 -0.402666666666667 9.66769344417947 16.3356559420701 -0.370333333333333 -0.402666666666667 0.107951990745996 0.0232506129082978 -1.92403079695662 -3.13063809615131 Q8IYD8 FANCM Q8IYD8.S34.p_FANCM Q8IYD8_S34s _1_1_34_34 Q8IYD8 Q8IYD8|Q8IYD8-3|Q8IYD8-2 Fanconi anemia group M protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4612.4612.3 12.64 7.47 1.475 9 1 1 0 863.738 2509.2353 S34s TMT10 19 (R) SSGTPGCSSGTERPQsPGSSK (A) S(0.0)S(0.0)GT(0.0)PGCS(0.0)S(0.0)GT(0.0)ERPQS(0.99)PGS(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FANCM 234983 3 1 2500.1 81.07 HUMAN 1 -9.6677 -16.3357 SGTGAPGSLGRLDPT-p Q7Z2K8;S341-p SGTGAPGSLGRLDPT 0.990440674560662 0.237833759142707 -0.00200000000000001 -0.176666666666667 0.0854875106056618 8.21508570199753 -0.00200000000000001 -0.176666666666667 0.980508242696102 0.150831284578301 -0.0255812451927902 -1.67190801041177 Q7Z2K8 GPRIN1 Q7Z2K8.S341.p_GPRIN1 Q7Z2K8_S341s_1_1_341_341 Q7Z2K8 Q7Z2K8|Q7Z2K8-2 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25847.25847.4 13.84 12.39 1.103 8 1 1 0 1095.0493 4296.2004 S341s N360n TMT10 329 (K) NGPVSSGTGAPGsLGRLDPTCLGMADPASVGnVETVPATK (E) N(0.0)GPVS(0.0)S(0.0)GT(0.0)GAPGS(0.99)LGRLDPT(0.0)CLGMADPAS(0.0)VGN(0.99)VET(0.0)VPAT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated GPRIN1 103196.3 3 9 292.1 381.4 HUMAN 1 -0.0855 -8.2151 SGTLASASPDWVGPS-p Q5VWQ8;S957-p SGTLASASPDWVGPS 0.191102046396083 0.687843004406755 0.246666666666667 -0.05 14.0390692348883 2.22477144359397 0.246666666666667 -0.05 0.0394541849877704 0.599132468360456 2.70009449046811 -0.557955771101319 Q5VWQ8 DAB2IP Q5VWQ8.S957.p_DAB2IP Q5VWQ8_S957s _1_1_957_957 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27569.27569.4 21.66 21.66 1.203 11 1 1 0 916.4651 3582.8754 S957s TMT10 935 (R) TPPNLLSTLQYPRPSSGTLASAsPDWVGPSTR (L) T(0.0)PPNLLS(0.0)T(0.0)LQY(0.0)PRPS(0.0)S(0.0)GT(0.0)LAS(0.0)AS(0.99)PDWVGPS(0.0)T(0.0)R s:Phosphorylated S DAB2IP 132592.9 4 17 281.1 388.28 HUMAN 1 14.0391 -2.2248 SGTRRAPSPVVSPTE-p Q9UPX8-3;S1709-p SGTRRAPSPVVSPTE 0.411382195733206 0.207208160030084 -0.122666666666667 0.132333333333333 7.11919057264728 8.99188748600428 -0.122666666666667 0.132333333333333 0.194124764883154 0.126127925124043 -1.48186118959479 1.80630936042471 Q9UPX8 SHANK2 Q9UPX8.3.S1709.p_SHANK2 Q9UPX8-3_S1709s _1_1_1709_1709 Q9UPX8-3 Q9UPX8-3|A6NHU9|A0A0A0MSQ6|Q9UPX8-4 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12960.12960.3 16.12 16.12 2.968 3 1 1 0 684.3643 1971.1098 S1709s TMT10 1706 (R) RAPsPVVSPTEMNK (E) RAPS(0.99)PVVS(0.0)PT(0.0)EMNK K:TMT10,s:Phosphorylated S SHANK2 202341.2 11 29 86.1 628.23 HUMAN 1 -7.1192 8.9919 SGTRRAVSPSNPKAR-p Q14244-7;S337-p SGTRRAVSPSNPKAR 0.534705148071304 0.0442583861123211 0.088 -0.240666666666667 5.03268633953738 18.1300164045464 0.088 -0.240666666666667 0.313856672492188 0.015381488302634 1.11004470189928 -3.48574631932303 Q14244 MAP7 Q14244.7.S337.p_MAP7 Q14244-7_S337s _1_1_337_337 Q14244-7 A0A087WZ40|Q14244-7|Q14244-4|Q14244-6|Q14244-2 Isoform 7 of Ensconsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7831.7831.2 11.7 11.7 1.269 2 1 1 0 669.3652 1257.7567 S337s TMT10 335 (R) AVsPSNPK (A) AVS(0.99)PS(0.0)NPK K:TMT10,s:Phosphorylated S MAP7 87064.8 7 12 581.1 266.4 HUMAN 1 5.0327 -18.13 SGTSRKKSIPLSIKN-p Q9C0C9;S515-p SGTSRKKSIPLSIKN 0.224767265517543 0.00989476164701252 -0.213333333333333 0.907666666666667 12.4575986462832 28.19482541709 -0.213333333333333 0.907666666666667 0.0567858505829269 0.00151536571896484 -2.41377285623259 5.89254239304171 Q9C0C9 UBE2O Q9C0C9.S515.p_UBE2O Q9C0C9_S515s _1_1_515_515 Q9C0C9 Q9C0C9 (E3-independent) E2 ubiquitin-conjugating enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16592.16592.3 9.43 9.43 9.431 2 1 1 0 670.7684 1930.3235 S515s TMT10 513 (R) KKsIPLSIK (N) KKS(0.99)IPLS(0.0)IK K:TMT10,s:Phosphorylated S UBE2O 142717.3 3 9 308.1 373.27 HUMAN 1 -12.4576 28.1948 SGTSSPQSPVFRHRT-p Q8N556-2;S752-p SGTSSPQSPVFRHRT 0.558270743644086 0.0866625222424598 -0.0843333333333333 -0.233666666666667 4.67574144929224 14.0611583963683 -0.0843333333333333 -0.233666666666667 0.340742146628306 0.0392540218938338 -1.04428624950832 -2.70252441875486 Q8N556 AFAP1 Q8N556.2.S752.p_AFAP1 Q8N556-2_S752s _1_1_752_752 Q8N556-2 Q8N556-2 Isoform 2 of Actin filament-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9267.9267.2 16.44 16.44 2.926 5 1 1 0 779.8772 1478.7801 S752s TMT10 745 (K) SGTSSPQsPVFR (H) S(0.0)GT(0.0)S(0.0)S(0.0)PQS(0.99)PVFR s:Phosphorylated S AFAP1 90706.1 3 5 854.1 211.2 HUMAN 1 -4.6757 -14.0612 SGTVLSRSQPWDLTP-p Q9H201;S358-p SGTVLSRSQPWDLTP 0.15698322903478 0.0261710921872688 -0.302 -0.398333333333333 16.1299502227795 21.5086995223701 -0.302 -0.398333333333333 0.0243783875981107 0.00706529089928056 -3.09318200212881 -4.20615619119513 Q9H201 EPN3 Q9H201.S358.p_EPN3 Q9H201_S358s _1_1_358_358 Q9H201 Q9H201 Epsin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32643.32643.3 17.93 17.93 5.266 5 1 1 0 795.0391 2303.1328 S358s TMT10 358 (R) sQPWDLTPMLSSSEPWGR (T) S(0.99)QPWDLT(0.0)PMLS(0.0)S(0.0)S(0.0)EPWGR s:Phosphorylated S EPN3 68392.2 8 7 953.1 196.01 HUMAN 1 -16.13 -21.5087 SGVDTQNSEGNADEE-p Q8ND56-2;S347-p SGVDTQNSEGNADEE 0.667412528016874 0.0600984255283445 -0.0633333333333333 0.227666666666667 3.28277636639609 16.2694661691568 -0.0633333333333334 0.227666666666667 0.469593809763537 0.023607683988599 -0.777284773034569 3.11785387547101 Q8ND56 LSM14A Q8ND56.2.S347.p_LSM14A Q8ND56-2_S347s_1_1_347_347 Q8ND56-2 Q8ND56|Q8ND56-2|Q8ND56-3 Isoform 2 of Protein LSM14 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16192.16192.5 19.62 19.62 1.16 5 1 1 0 1034.4855 5087.4106 S347s N350n TMT10 328 (K) QEKPVNGEDKGDSGVDTQNsEGnADEEDPLGPNCYYDK (T) QEKPVN(0.0)GEDKGDS(0.0)GVDT(0.0)QN(0.0)S(0.99)EGN(0.99)ADEEDPLGPN(0.0)CY(0.0)Y(0.0)DK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated LSM14A 50781.2 4 6 646.1 254.77 HUMAN 1 -3.2828 16.2695 SGVKIHVSDQELQSA-p P22314;S810-p SGVKIHVSDQELQSA 0.45105259442033 0.03709403949016 0.125666666666667 0.283 6.38284854135819 19.2358930232939 0.125666666666667 0.283 0.229993279461831 0.0119236905831286 1.35249002080629 3.7135430587271 P22314 UBA1 P22314.S810.p_UBA1 P22314_S810s _1_1_810_810 P22314 P22314|P22314-2|Q5JRR6 Ubiquitin-like modifier-activating enzyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19828.19828.4 21.5 21.5 9.411 4 1 1 0 806.1592 3141.6428 S810s TMT10 807 (K) IHVsDQELQSANASVDDSRLEELK (A) IHVS(0.99)DQELQS(0.0)ANAS(0.0)VDDS(0.0)RLEELK K:TMT10,s:Phosphorylated S UBA1 118930.9 5 8 289.1 381.86 HUMAN 1 6.3828 19.2359 SGVKRSRSGEGEVSG-p Q13263;S473-p SGVKRSRSGEGEVSG 0.198291367686798 0.0632688303323146 0.247 0.327666666666667 13.6957575292825 15.9619027746808 0.247 0.327666666666667 0.0426996432997329 0.0253401815771857 2.63722694445733 3.05872372404868 Q13263 TRIM28 Q13263.S473.p_TRIM28 Q13263_S473s_1_1_473_473 Q13263 Q13263|Q13263-2 Transcription intermediary factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5856.5856.2 16.5 16.5 16.497 2 1 1 0 609.248 1121.5255 S473s M482m Hydrogen 473 (R) sGEGEVSGLmR (K) S(0.99)GEGEVS(0.0)GLM(1.0)R s:Phosphorylated S,m:Oxidized methionine TRIM28 90316.8 19 12 118.1 555.36 HUMAN 1 13.6958 15.9619 SGVNLQRSLSSPPSS-p Q5VW30;S262-p SGVNLQRSLSSPPSS 0.403143532640297 0.954099200136673 0.155666666666667 0.00833333333333336 7.28445027388475 0.29059057080523 0.155666666666667 0.00833333333333337 0.186876620905996 0.935278482634289 1.51071859527058 0.0850438883167416 Q5VW30 NFIB Q5VW30.S262.p_NFIB Q5VW30_S262s _1_1_262_262 Q5VW30 Q5VW30|O00712-5|Q5VW27|A0A1B0GU97|O00712-4|A0A0A0MRX8|A0A1B0GWJ4|A0A1B0GVN4|U3KQE8|A0A1B0GW37|O00712-6|A0A1B0GWB8|Q5VW31 Nuclear factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9503.9503.2 13.71 13.71 4.401 5 1 1 0 714.3819 1347.7884 S262s TMT10 262 (R) sLSSPPSSK (R) S(0.99)LS(0.0)S(0.0)PPS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S NFIB 63015.1 4 5 655.1 253.73 HUMAN 1 7.2845 0.2906 SGVSPLYSPVSFCGI-p Q9BZH6;S406-p SGVSPLYSPVSFCGI 0.94241987079367 0.299049067591787 0.0116666666666667 0.148 0.507109848600102 6.92219871236845 0.0116666666666667 0.148 0.88979306209672 0.203132834542975 0.145220174044325 1.44699219521791 Q9BZH6 WDR11 Q9BZH6.S406.p_WDR11 Q9BZH6_S402sS406s_2_2_402_406 Q9BZH6 Q9BZH6 WD repeat-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.35439.35439.4 13.47 13.47 1.108 7 2 2 0 828.6605 3151.6862 S402s S406s TMT10 396 (R) NSSSGVsPLYsPVSFCGIPVGVLQNK (L) NS(0.0)S(0.0)S(0.0)GVS(0.99)PLY(0.0)S(0.99)PVS(0.0)FCGIPVGVLQNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WDR11 138508.1 2 7 1513.1 134.66 HUMAN 1 0.5071 6.9222 SGYSSPGSPGTPGSR-p P10636;S519-p SGYSSPGSPGTPGSR 0.601665992716289 0.86740165726671 -0.0926666666666667 0.0176666666666667 4.07558838120217 0.869298497734288 -0.0926666666666667 0.0176666666666667 0.391238118682484 0.818597002864755 -0.931551080631023 0.24074084682608 P10636 MAPT P10636.S519.p_MAPT P10636_S519s _1_1_519_519 P10636 P10636-9|A0A0G2JMX7|A0A0G2JS76|A0A0G2JPD5|A0A0G2JQJ7|P10636-8|P10636-7|P10636-5|P10636-6|P10636-4|P10636-2|I3L170|P10636-3 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6121.6121.3 21.14 21.14 2.603 7 1 1 0 568.2598 1622.7972 S519s TMT10 512 (R) SGYSSPGsPGTPGSR (S) S(0.0)GY(0.0)S(0.0)S(0.0)PGS(0.99)PGT(0.0)PGS(0.0)R s:Phosphorylated S MAPT 79154.4 5 12 119.1 551.6 HUMAN 1 -4.0756 0.8693 SHAAGDNSTLLSFKE-p I3L4C2;S424-p SHAAGDNSTLLSFKE 0.08581207963261 0.412412716721558 -0.417 -0.0793333333333333 22.8263126049738 5.11653841013449 -0.417 -0.0793333333333333 0.00521637421517972 0.307854962746456 -4.51348739760962 -1.12514018554154 I3L4C2 BAIAP2 I3L4C2.S424.p_BAIAP2 I3L4C2_S424s_1_1_424_424 I3L4C2 I3L4C2|Q9UQB8|Q9UQB8-2|Q9UQB8-6|Q9UQB8-4|Q9UQB8-5|Q9UQB8-3|B4DWA1 Brain-specific angiogenesis inhibitor 1-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.33897.33897.4 19 19 1.169 5 1 1 0 931.9944 3644.01 N423n S424s TMT10 414 (K) AIFSHAAGDnsTLLSFKEGDLITLLVPEAR (D) AIFS(0.0)HAAGDN(1.0)S(0.99)T(0.0)LLS(0.0)FKEGDLIT(0.0)LLVPEAR K:TMT10,n:Deamidated,s:Phosphorylated S BAIAP2 61608.4 4 14 386.1 333.05 HUMAN 1 -22.8263 -5.1165 SHCQKSGSPISSEER-p H8Y6P7;S667-p SHCQKSGSPISSEER 0.954047274316953 0.453720722515677 0.0103333333333333 -0.0796666666666667 0.400029337523396 4.57456560981585 0.0103333333333333 -0.0796666666666667 0.91200467854796 0.348773467423044 0.115776820506754 -1.02529155548521 H8Y6P7 GCOM1 H8Y6P7.S667.p_GCOM1 H8Y6P7_S667s _1_1_667_667 H8Y6P7 H8Y6P7|P0CAP1-11|P0CAP2|P0CAP2-3|P0CAP2-2 GRINL1A combined protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5832.5832.2 14.43 9.93 2.371 4 1 1 0 679.3142 1277.6535 S667s TMT10 665 (K) SGsPISSEER (R) S(0.0)GS(0.99)PIS(0.0)S(0.0)EER s:Phosphorylated S GCOM1 88318.6 3 4 2612.1 76.74 HUMAN 1 0.4 -4.5746 SHCSQFVTPPRMRRQ-p O60333-3;T1132-p SHCSQFVTPPRMRRQ 0.686404096983296 0.0656903611780786 -0.075 -0.424666666666667 3.06645283749436 15.7333948398907 -0.075 -0.424666666666667 0.493576775280655 0.0267091776066348 -0.733877598767416 -3.0150784597572 O60333 KIF1B O60333.3.T1132.p_KIF1B O60333-3_T1132t _1_1_1132_1132 O60333-3 O60333-3 Isoform 3 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8796.8796.4 15.02 10.04 4.131 4 1 1 0 678.3399 2630.3696 T1132t TMT10 1120 (K) QTDKPSHCSQFVtPPRMR (R) QT(0.0)DKPS(0.0)HCS(0.0)QFVT(0.99)PPRMR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T KIF1B 131388.1 2 17 606.2 262.24 HUMAN 1 -3.0665 -15.7334 SHCYIPQSPEPDLHK-p A0A087WTF0;S492-p SHCYIPQSPEPDLHK 0.0866557243462627 0.00610086493342327 -0.410666666666667 -0.553333333333333 22.7057666538652 31.9435827210789 -0.410666666666667 -0.556299065484252 0.00536319187420808 0.000639207302565729 -4.48521327789174 -7.03385113263873 A0A087WTF0 PTPDC1 A0A087WTF0.S492.p_PTPDC1 A0A087WTF0_S492s _1_1_492_492 A0A087WTF0 A0A087WTF0|A2A3K4-2 Protein tyrosine phosphatase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17520.17520.3 17.86 17.86 8.321 3 1 1 0 858.1113 2492.3372 S492s TMT10 483 (K) LISHCYIPQsPEPDLHK (E) LIS(0.0)HCY(0.0)IPQS(0.99)PEPDLHK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PTPDC1 91341.7 3 2 4346.1 33.09 HUMAN 1 -22.7058 -31.9436 SHEFQDETDTEEETL-p O75976;T1368-p SHEFQDETDTEEETL 0.379613640101979 0.0128852408631601 0.123333333333333 0.382666666666667 7.77126664278163 26.3145943484069 0.123333333333333 0.382666666666667 0.167060330297875 0.00233636431950859 1.59545469710214 5.37743885256297 O75976 CPD O75976.T1368.p_CPD O75976_T1368t _1_1_1368_1368 O75976 O75976 Carboxypeptidase D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19663.19663.4 17.96 16.47 1.108 8 1 1 0 871.6829 3403.736 T1368t TMT10 1357 (K) KSLLSHEFQDEtDTEEETLYSSK (H) KS(0.0)LLS(0.0)HEFQDET(0.99)DT(0.0)EEET(0.0)LY(0.0)S(0.0)S(0.0)K K:TMT10,t:Phosphorylated T CPD 154012.3 3 2 2250.1 91.39 HUMAN 1 7.7713 26.3146 SHEGETAYIRVKVDG-p J3KTL2;Y189-p SHEGETAYIRVKVDG 0.199306780118349 0.88941033203103 0.291 0.0256666666666667 13.6332444910637 0.714757624486196 0.291 0.0256666666666667 0.043318713563373 0.848250721176708 2.62582477611356 0.200694829729828 J3KTL2 NotFound J3KTL2.Y189.p_NotFound J3KTL2_Y189y _1_1_189_189 J3KTL2 J3KTL2|Q07955 Serine/arginine-rich-splicing factor 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.5599.5638.3 19.61 19.61 6.862 3 1 1 0 491.2305 1391.7117 Y189y TMT10 182 (R) SHEGETAyIR (V) S(0.0)HEGET(0.0)AY(0.99)IR y:Phosphorylated Y SRSF1 28442.8 4 1 178.1 19.61 HUMAN 1 13.6332 0.7148 SHFEQWGTLTDCVVM-p P09651-2;T39-p SHFEQWGTLTDCVVM 0.814089108611631 0.0519260893065422 -0.046 0.243 1.71786524055877 17.144724804803 -0.046 0.243 0.673307536937187 0.0192986762037603 -0.445373330905066 3.28866151475166 P09651 HNRNPA1 P09651.2.T39.p_HNRNPA1 P09651-2_T39t _1_1_39_39 P09651-2 P09651|P09651-2 Isoform A1-A of Heterogeneous nuclear ribonucleoprotein A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21193.21193.4 19.68 19.68 3.369 4 1 1 0 765.6186 2979.4857 T39t TMT10 32 (R) SHFEQWGtLTDCVVMRDPNTK (R) S(0.0)HFEQWGT(0.99)LT(0.0)DCVVMRDPNT(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T HNRNPA1 34309.7 1 5 504.1 289.99 HUMAN 1 -1.7179 17.1447 SHFRNVHSEDFENRI-p Q9H2P0;S98-p SHFRNVHSEDFENRI 0.198479957783328 0.00752314179680432 -0.270666666666667 -0.596 13.6723698126932 30.3451930503048 -0.270666666666667 -0.596 0.0429302105758048 0.000923593132429739 -2.63295950116135 -6.52733740834444 Q9H2P0 ADNP Q9H2P0.S98.p_ADNP Q9H2P0_S98s _1_1_98_98 Q9H2P0 Q9H2P0 Activity-dependent neuroprotector homeobox protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5992.5992.3 17.93 17.93 99 1 1 1 0 519.2303 1475.7076 S98s TMT10 95 (R) NVHsEDFENR (I) NVHS(1.0)EDFENR s:Phosphorylated S ADNP 124930 3 2 276.1 391.38 HUMAN 1 -13.6724 -30.3452 SHGEARLSDPPGRAA-p Q7L2J0;S101-p SHGEARLSDPPGRAA 0.580942837297792 0.0264893449795394 0.0793333333333333 -0.320333333333333 4.33958325741174 21.4029746179986 0.0793333333333333 -0.320333333333333 0.368164300451565 0.00723939941240314 0.981509767007269 -4.18245488200819 Q7L2J0 MEPCE Q7L2J0.S101.p_MEPCE Q7L2J0_S101s _1_1_101_101 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4803.4803.3 13.85 8.28 3.093 2 1 1 0 761.6977 2203.1166 S101s TMT10 87 (R) GGGPQAQSHGEARLsDPPGR (A) GGGPQAQS(0.0)HGEARLS(0.99)DPPGR s:Phosphorylated S MEPCE 74981.5 1 3 428.1 317.7 HUMAN 1 4.3396 -21.403 SHGGMRASPNLKQEE-p Q96PN7;S540-p SHGGMRASPNLKQEE 0.361131241199818 0.0111912357624314 -0.229666666666667 0.677666666666667 8.22429482292206 27.3235985188737 -0.229666666666667 0.677666666666667 0.15051178895037 0.00185199644250934 -1.67404897259569 5.64946347045167 Q96PN7 TRERF1 Q96PN7.S540.p_TRERF1 Q96PN7_S540s _1_1_540_540 Q96PN7 Q05GC8|Q96PN7 Transcriptional-regulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6967.6967.5 14.49 14.49 1.12 2 1 1 0 545.2853 2642.4287 S540s TMT10 533 (R) SHGGMRAsPNLKQEEGEK (V) S(0.0)HGGMRAS(0.99)PNLKQEEGEK K:TMT10,s:Phosphorylated S TRERF1 132995.3 6 4 1115.1 175.65 HUMAN 1 -8.2243 27.3236 SHGGMRASPNLKQEI-p Q96PN7-5;S540-p SHGGMRASPNLKQEI 0.140818172070489 0.00338010316755577 -0.408666666666667 -0.703666666666667 17.4086796039295 36.9579701903426 -0.408666666666667 -0.703666666666667 0.0181606772233116 0.000201466564618523 -3.34356630006283 -8.84374759789064 Q96PN7 TRERF1 Q96PN7.5.S540.p_TRERF1 Q96PN7-5_S540s _1_1_540_540 Q96PN7-5 Q96PN7-5 Isoform 5 of Transcriptional-regulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11326.11326.4 7.67 7.67 99 1 1 1 0 480.5263 1839.1216 S540s Hydrogen 539 (R) AsPNLKQEIPRK (H) AS(1.0)PNLKQEIPRK K:TMT10-Lys-Only,s:Phosphorylated S TRERF1 125852.2 1 13 1115.3 175.65 HUMAN 1 -17.4087 -36.958 SHGGRSRSWEDSPER-p A0A1B0GTW1;S229-p SHGGRSRSWEDSPER 0.44074595414421 0.0886642515243664 0.111 0.277 6.55488118478975 13.9262076237827 0.111 0.277 0.221060873377715 0.0404929332541502 1.38284971870731 2.67778397228692 A0A1B0GTW1 NotFound A0A1B0GTW1.S229.p_NotFound A0A1B0GTW1_S229s _1_1_229_229 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5899.5899.2 9.79 5.9 1.123 3 1 1 0 779.3486 1477.7233 S229s TMT10 227 (R) SRsWEDSPER (G) S(0.0)RS(0.99)WEDS(0.0)PER s:Phosphorylated S TJP2 141123.7 3 3 41.1 827.72 HUMAN 1 6.5549 13.9262 SHGLPRCSPYKKLTE-p P55265-4;S534-p SHGLPRCSPYKKLTE 0.945369130311494 0.0358943447129582 -0.00966666666666668 -0.691333333333333 0.479208437519588 19.4495322364266 -0.0103068467344862 -0.691333333333333 0.895527973183304 0.0113513307034737 -0.13760503449484 -3.75840328746542 P55265 ADAR P55265.4.S534.p_ADAR P55265-4_S534s _1_1_534_534 P55265-4 P55265-4 Isoform 4 of Double-stranded RNA-specific adenosine deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23324.23324.5 17.08 17.08 2.832 5 1 1 0 582.687 2829.4291 S534s TMT10 518 (R) AIMEMPSFYSHGLPRCsPYK (K) AIMEMPS(0.0)FY(0.0)S(0.0)HGLPRCS(0.99)PY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ADAR 142147.5 1 8 584.1 265.43 HUMAN 1 -0.4792 -19.4495 SHHFMPGSPTKTVYK-p Q9HCI7;S447-p SHHFMPGSPTKTVYK 0.229401753870038 0.00209247194223276 -0.216333333333333 -0.960666666666667 12.2906297614185 41.7245875379109 -0.216333333333333 -0.960666666666667 0.0590115502542479 6.72266153149814e-05 -2.38399281517909 -10.9349236730561 Q9HCI7 MSL2 Q9HCI7.S447.p_MSL2 Q9HCI7_S447s _1_1_447_447 Q9HCI7 Q9HCI7|Q9HCI7-2 E3 ubiquitin-protein ligase MSL2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11192.11192.4 22.52 22.52 2.788 3 1 1 0 615.8329 2380.3414 S447s TMT10 436 (K) EKIPSHHFMPGsPTK (T) EKIPS(0.0)HHFMPGS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S MSL2 64251.1 3 3 3201.1 57.66 HUMAN 1 -12.2906 -41.7246 SHHKVSVSPVVHVRG-p D6W592;S75-p SHHKVSVSPVVHVRG 0.216110872870992 0.365983934919881 -0.223 -0.149666666666667 12.8238412552845 5.78700713518023 -0.223 -0.149666666666667 0.0521934343398724 0.263814879385212 -2.47937198922744 -1.24623949376245 D6W592 NotFound D6W592.S75.p_NotFound D6W592_S75s _1_1_75_75 D6W592 Q8WVV9|D6W592|Q8WVV9-4|C9IYN3|Q8WVV9-5|B7WPG3|Q8WVV9-2|Q8WVV9-3 Heterogeneous nuclear ribonucleoprotein L-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14526.14526.3 13.28 13.28 2.145 2 1 1 0 463.2596 1307.7997 S75s TMT10 72 (K) VSVsPVVHVR (G) VS(0.0)VS(0.99)PVVHVR s:Phosphorylated S HNRPLL 60954 1 4 1148.1 172.52 HUMAN 1 -12.8238 -5.787 SHHSQRSSLSGDEED-p Q5T1M5;S1162-p SHHSQRSSLSGDEED 0.998180995519267 0.223872840714642 -0.000333333333333348 -0.149 0.0120654668333849 8.56064045883341 -0.000333333333333346 -0.149 0.997225679153715 0.139295136773258 -0.00364059519309408 -1.73171634070937 Q5T1M5 FKBP15 Q5T1M5.S1162.p_FKBP15 Q5T1M5_S1162sS1164s_2_2_1162_1164 Q5T1M5 Q5T1M5|Q5T1M5-2 FK506-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24933.25349.2 12.99 12.99 2.002 3 2 2 0 1037.4567 1913.9744 S1162s S1164s TMT10 1161 (R) SsLsGDEEDELFK (G) S(0.0)S(0.99)LS(0.99)GDEEDELFK K:TMT10,s:Phosphorylated S FKBP15 134140.9 13 26 173.1 487.64 HUMAN 1 -0.0121 -8.5606 SHKKSRLSSAEEASK-p Q70Z53;S251-p SHKKSRLSSAEEASK 0.45060350179761 0.0300834069969236 0.109 -0.440666666666667 6.39386538477387 20.5911359538675 0.109 -0.440666666666667 0.229410589836534 0.00872743061199194 1.35443705131929 -4.00309074537835 Q70Z53 FRA10AC1 Q70Z53.S251.p_FRA10AC1 Q70Z53_S251s _1_1_251_251 Q70Z53 Q70Z53|Q70Z53-3|Q70Z53-5|Q70Z53-4|Q70Z53-2 Protein FRA10AC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6789.6789.2 11.08 11.08 1.106 4 1 1 0 851.943 1622.9114 S251s TMT10 248 (K) SRLsSAEEASK (K) S(0.0)RLS(0.99)S(0.0)AEEAS(0.0)K K:TMT10,s:Phosphorylated S FRA10AC1 37946.8 2 1 1518.1 134.45 HUMAN 1 6.3939 -20.5911 SHKRRRETPSPRPMR-p Q9UQ35;T2738-p SHKRRRETPSPRPMR 0.140818172070489 0.825533350414788 0.625666666666667 0.036 17.4017290196644 1.16553355173005 0.625666666666667 0.036 0.0181897654078474 0.764621745196805 3.34218244495108 0.314868688244425 Q9UQ35 SRRM2 Q9UQ35.T2738.p_SRRM2 Q9UQ35_T2738tS2740s_2_2_2738_2740 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.2899.2899.4 9.77 9.77 99 2 2 2 0 386.4244 1382.7434 T2738t S2740s Hydrogen 2735 (R) RREtPsPRPMR (H) RRET(1.0)PS(1.0)PRPMR t:Phosphorylated T,s:Phosphorylated S SRRM2 300351.7 15 245 2.1 3310.34 HUMAN 1 17.4017 1.1655 SHLNGPSSDPEAAFL-p Q9H4A3-7;S2425-p SHLNGPSSDPEAAFL 0.761476943047114 0.572500692280055 0.046 -0.0586666666666666 2.26675149276651 3.26499843952678 0.046 -0.0586666666666666 0.593368996519668 0.471520040759339 0.567097949671726 -0.773626966226909 Q9H4A3 WNK1 Q9H4A3.7.S2425.p_WNK1 Q9H4A3-7_S2424sS2425s_2_2_2424_2425 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2|F5GWT4|Q9H4A3-4 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19280.19280.5 23.49 23.49 9.305 5 2 2 0 734.769 3509.8843 S2424s S2425s TMT10 2409 (K) KEKPELSEPSHLNGPssDPEAAFLSR (D) KEKPELS(0.0)EPS(0.0)HLNGPS(0.99)S(0.99)DPEAAFLS(0.0)R K:TMT10,s:Phosphorylated S WNK1 301202.7 10 29 162.1 495.27 HUMAN 1 2.2668 -3.265 SHLPVAESPDMKKEQ-p Q9NZC4-3;S206-p SHLPVAESPDMKKEQ 0.804458682239313 0.0109636238301829 0.0806666666666666 0.493 1.8216544042516 27.4635276385706 0.0806666666666666 0.493 0.657407356459147 0.00179327641261055 0.468933596748011 5.68798246994925 Q9NZC4 EHF Q9NZC4.3.S206.p_EHF Q9NZC4-3_S206s _1_1_206_206 Q9NZC4-3 Q9NZC4-3 Isoform 3 of ETS homologous factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18299.18299.4 18.01 18.01 4.151 6 1 1 0 760.655 2959.62 S206s TMT10 191 (R) AQISMTTTSHLPVAEsPDMKK (E) AQIS(0.0)MT(0.0)T(0.0)T(0.0)S(0.0)HLPVAES(0.99)PDMKK K:TMT10,s:Phosphorylated S EHF 37698 1 1 5579.1 18.01 HUMAN 1 1.8217 27.4635 SHLRRLNSPIGRDGK-p P30876;S487-p SHLRRLNSPIGRDGK 0.655753206660464 0.00671367697232148 -0.0656666666666667 -0.485333333333333 3.43826314677892 31.2099882275163 -0.0656666666666667 -0.485333333333333 0.453078741297133 0.000756834946581694 -0.808105519673861 -6.79753050600201 P30876 POLR2B P30876.S487.p_POLR2B P30876_S487s _1_1_487_487 P30876 P30876|C9J2Y9|A0A1W2PPT5|C9J4M6 DNA-directed RNA polymerase II subunit RPB2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6257.6257.3 9.27 3.72 99 1 1 1 0 407.8936 1141.7003 S487s TMT10 484 (R) RLNsPIGR (D) RLNS(1.0)PIGR s:Phosphorylated S POLR2B 135320.6 2 2 4578.1 29.47 HUMAN 1 -3.4383 -31.21 SHLSRNMTLQRTMKL-p O60551;T321-p SHLSRNMTLQRTMKL 0.886118944763575 0.893796276220667 -0.046 0.0206666666666667 1.0248465929918 0.684300459083058 -0.046 0.0206666666666667 0.789796747110136 0.854220430105913 -0.280099373555163 0.192680928397214 O60551 NMT2 O60551.T321.p_NMT2 O60551_T321t _1_1_321_321 O60551 Q6GYQ0|Q6GYQ0-4|Q6GYQ0-3|O60551|Q5VUC6 Glycylpeptide N-tetradecanoyltransferase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7835.7835.2 7.01 3.37 99 1 1 1 0 536.2651 991.5556 T321t TMT10 319 (R) NMtLQR (T) NMT(1.0)LQR t:Phosphorylated T NMT2 57321.5 1 4 2519.1 80.26 HUMAN 1 -1.0248 0.6843 SHMDDLNSENAKLDA-p Q14789-2;S2529-p SHMDDLNSENAKLDA 0.96776831271533 0.919701500302714 0.006 0.0113333333333333 0.277424229532162 0.512303144532463 0.006 0.0113333333333334 0.93811823338394 0.888729682958628 0.0813099600329725 0.146619587861637 Q14789 GOLGB1 Q14789.2.S2529.p_GOLGB1 Q14789-2_S2529s_1_1_2529_2529 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30971.30971.5 8.82 8.82 2.359 4 1 1 0 877.6569 4303.2847 S2529s N2546n TMT10 2522 (R) SHMDDLNsENAKLDAELIQYREDLnQVITIK (D) S(0.0)HMDDLN(0.0)S(0.99)EN(0.0)AKLDAELIQY(0.0)REDLN(0.99)QVIT(0.0)IK K:TMT10,s:Phosphorylated S,n:Deamidated GOLGB1 378557.2 1 23 93.1 610.98 HUMAN 1 0.2774 0.5123 SHMIHNRSKINLQDL-p P04035-3;S892-p SHMIHNRSKINLQDL 0.360609439778779 0.00104745705872082 0.514 -1.24166666666667 8.23642585846717 50.9604261135526 0.514 -1.24166666666667 0.150091954888182 8.01599409583889e-06 1.67615119328716 -16.3576313458093 P04035 HMGCR P04035.3.S892.p_HMGCR P04035-3_S892s _1_1_892_892 P04035-3 P04035-3|P04035-2 Isoform 3 of 3-hydroxy-3-methylglutaryl-coenzyme A reductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18626.18626.4 15.29 15.29 15.288 2 1 1 0 586.5745 2263.3047 S892s TMT10 892 (R) sKINLQDLQGACTK (K) S(0.99)KINLQDLQGACT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S HMGCR 101347.4 3 1 4683.1 28.04 HUMAN 1 8.2364 -50.9604 SHMNGHVTEESDSEV-p Q8N3R9;T11-p SHMNGHVTEESDSEV 0.279555400121424 0.0645346162319406 -0.207333333333333 0.214333333333333 10.463673256511 15.8443995024967 -0.207333333333333 0.214333333333333 0.0898737109411668 0.0260351479359287 -2.06239425523183 3.03625044735499 Q8N3R9 MPP5 Q8N3R9.T11.p_MPP5 Q8N3R9_T11tS14s_2_2_11_14 Q8N3R9 Q8N3R9|G3V2B0 MAGUK p55 subfamily member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6127.6127.3 11.24 11.24 1.696 6 2 2 0 812.328 2259.0397 M6m T11t S14s Acetyl 2 (M) TTSHmNGHVtEEsDSEVK (N) T(0.0)T(0.0)S(0.0)HM(1.0)NGHVT(0.99)EES(0.99)DS(0.0)EVK K:TMT10,m:Oxidized methionine,t:Phosphorylated T,s:Phosphorylated S MPP5 77577.4 2 5 2822.1 69.26 HUMAN 1 -10.4637 15.8444 SHNPVPLSPLRSRVS-p O95398;S864-p SHNPVPLSPLRSRVS 0.946798211390342 0.634110361555822 -0.02 -0.176333333333333 0.469597024463174 2.69068432700361 -0.02 -0.176333333333333 0.897512069477504 0.538184972889818 -0.134972657452197 -0.656767867101363 O95398 RAPGEF3 O95398.S864.p_RAPGEF3 O95398_S864s _1_1_864_864 O95398 O95398|O95398-3|F8VRX1 Rap guanine nucleotide exchange factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13212.13212.3 11.82 11.82 11.819 2 1 1 0 509.2745 1445.8426 S864s TMT10 857 (R) SHNPVPLsPLR (S) S(0.0)HNPVPLS(0.99)PLR s:Phosphorylated S RAPGEF3 104833.2 2 2 4632.1 28.59 HUMAN 1 -0.4696 -2.6907 SHNVAAGSYEAPLPP-p J3KNL6;S1389-p SHNVAAGSYEAPLPP 0.295408715152096 0.0729754826063382 0.277 -0.320666666666667 9.97132766425196 15.0989627510358 0.277 -0.320666666666667 0.100662389085479 0.0309103359260606 1.97672950871884 -2.89512790850195 J3KNL6 SEC16A J3KNL6.S1389.p_SEC16A J3KNL6_S1389sS1398s_2_2_1389_1398 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20792.20792.3 13.97 8.35 1.107 7 2 2 0 1119.8258 3197.5278 S1389s S1398s TMT10 1382 (R) SHNVAAGsYEAPLPPGsFHGDFAYGTYR (S) S(0.0)HNVAAGS(0.99)Y(0.0)EAPLPPGS(0.99)FHGDFAY(0.0)GT(0.0)Y(0.0)R s:Phosphorylated S SEC16A 253486.5 2 51 15.1 1143.82 HUMAN 1 9.9713 -15.099 SHRCDAGSPSKDSAA-p O75132;S1053-p SHRCDAGSPSKDSAA 0.738993942982216 0.0140166815842457 0.0526666666666667 -0.399333333333333 2.49157105181306 25.710225072989 0.0526666666666667 -0.399333333333333 0.563433797878724 0.00268520528136679 0.615107700361915 -5.21917661880406 O75132 ZBED4 O75132.S1053.p_ZBED4 O75132_S1053s _1_1_1053_1053 O75132 O75132 Zinc finger BED domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28074.28074.3 12.4 12.4 1.314 4 1 1 0 1034.8574 3022.5759 S1053s TMT10 1049 (R) CDAGsPSKDSAAEENLWSLVAK (V) CDAGS(0.99)PS(0.0)KDS(0.0)AAEENLWS(0.0)LVAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZBED4 132031.4 8 2 2933.1 65.56 HUMAN 1 2.4916 -25.7102 SHRGLHQSIEEFRAK-p Q15149;S701-p SHRGLHQSIEEFRAK 1 0.197679311494721 -9.25185853854297e-18 -0.14 9.64327466553287e-16 9.26368898603006 -3.20493781063927e-17 -0.14 1 0.118476195962811 -2.76381788241466e-16 -1.85333059737751 Q15149 PLEC Q15149.S701.p_PLEC Q15149_S701s _1_1_701_701 Q15149 Q15149|Q15149-2|Q15149-3 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11715.11715.3 8.8 8.8 99 1 1 1 0 508.9193 1444.7746 S701s TMT10 697 (R) GLHQsIEEFR (A) GLHQS(1.0)IEEFR s:Phosphorylated S PLEC 533778 1 5 44.1 794.85 HUMAN 1 0 -9.2637 SHRHGAGSGCLGTME-p Q9BYG5;S11-p SHRHGAGSGCLGTME 0.521914890520653 0.454904252621326 0.086 0.084 5.22069666240691 4.56066734705358 0.086 0.084 0.300559412924609 0.349891397767171 1.14435244561957 1.02270370057521 Q9BYG5 PARD6B Q9BYG5.S11.p_PARD6B Q9BYG5_S11s _1_1_11_11 Q9BYG5 Q9BYG5|Q9BYG5-2 Partitioning defective 6 homolog beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10680.10680.2 19.47 19.47 6.553 2 1 1 0 856.8899 1632.8035 S11s Hydrogen 7 (R) HGAGsGCLGTMEVK (S) HGAGS(0.99)GCLGT(0.0)MEVK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S PARD6B 41238.5 15 1 2369.1 86.37 HUMAN 1 5.2207 4.5607 SHRMWRFSGQIERVT-p Q13610;S342-p SHRMWRFSGQIERVT 0.239911948391928 0.0281324370185015 -0.225666666666667 -0.422666666666667 11.8512117721859 21.015275418535 -0.225666666666667 -0.422666666666667 0.0652948341022458 0.00791539255622422 -2.30597120771741 -4.0962232233599 Q13610 PWP1 Q13610.S342.p_PWP1 Q13610_S342s _1_1_342_342 Q13610 Q13610|B4DJV5 Periodic tryptophan protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18140.18140.3 11.69 11.69 99 1 1 1 0 540.2644 1538.8099 S342s TMT10 338 (R) MWRFsGQIER (V) MWRFS(1.0)GQIER s:Phosphorylated S PWP1 56397.4 1 2 2267.1 90.54 HUMAN 1 -11.8512 -21.0153 SHRSQPSSGDEDSDD-p Q9UKJ3;S815-p SHRSQPSSGDEDSDD 0.621295713198345 0.696484843776687 0.099 0.126666666666667 3.84345279392098 2.15894358718954 0.099 0.126666666666667 0.412719245199726 0.608282946918205 0.887084672261126 0.543655441811802 Q9UKJ3 GPATCH8 Q9UKJ3.S815.p_GPATCH8 Q9UKJ3_S814sS815sS820s_3_3_814_820 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3037.3037.3 10.85 10.85 3.546 6 3 3 0 749.2564 2005.8533 S814s S815s S820s TMT10 811 (R) SQPssGDEDsDDASSHR (L) S(0.0)QPS(0.99)S(0.99)GDEDS(0.99)DDAS(0.0)S(0.0)HR s:Phosphorylated S GPATCH8 165107.3 1 22 231.1 422.52 HUMAN 1 3.8435 2.1589 SHSFSDPSPKFAHHH-p A0A0D9SEY1;S648-p SHSFSDPSPKFAHHH 0.548865378149301 0.0118652788781028 0.108333333333333 0.388333333333333 4.80825534995212 26.9134975976656 0.108333333333333 0.388333333333333 0.330502283921377 0.00203540220298555 1.06879984896381 5.53769918451739 A0A0D9SEY1 NotFound A0A0D9SEY1.S648.p_NotFound A0A0D9SEY1_S648s _1_1_648_648 A0A0D9SEY1 O95819-3|A0A0D9SEY1 Mitogen-activated protein kinase kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7060.7060.3 10.35 10.35 3.054 4 1 1 0 542.9363 1546.8266 S648s TMT10 641 (R) SHSFSDPsPK (F) S(0.0)HS(0.0)FS(0.0)DPS(0.99)PK K:TMT10,s:Phosphorylated S MAP4K4 151879.6 1 5 131.2 535.29 HUMAN 1 4.8083 26.9135 SHSLENESIKRTSRD-p Q13496;S18-p SHSLENESIKRTSRD 0.771638354290043 0.825657726325012 0.0473333333333333 -0.05 2.15597281159785 1.16371469712767 0.0473333333333333 -0.05 0.608699182999568 0.764942041010754 0.543072826894918 -0.314423278728775 Q13496 MTM1 Q13496.S18.p_MTM1 Q13496_S18s _1_1_18_18 Q13496 Q13496|Q13496-2 Myotubularin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7759.7759.3 14.27 14.27 2.441 4 1 1 0 705.6929 2035.0973 S18s TMT10 9 (K) YNSHSLENEsIKR (T) Y(0.0)NS(0.0)HS(0.0)LENES(0.99)IKR K:TMT10,s:Phosphorylated S MTM1 70443.9 4 2 2603.1 76.99 HUMAN 1 2.156 -1.1637 SHSSIQNSPKLTPKM-p O15440;S509-p SHSSIQNSPKLTPKM 0.260386657049657 0.834743698929883 0.181 -0.0216666666666667 11.0779473093347 1.09949997657986 0.181 -0.0216666666666667 0.0780198783949144 0.776336494711868 2.16977069792614 -0.298624216997337 O15440 ABCC5 O15440.S509.p_ABCC5 O15440_S509sT513t_2_2_509_513 O15440 O15440|O15440-5 Multidrug resistance-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18043.18043.4 17.48 17.48 2.212 7 2 2 0 808.1617 3069.6936 S509s T513t TMT10 494 (K) NATLAWDSSHSSIQNsPKLtPK (M) NAT(0.0)LAWDS(0.0)S(0.0)HS(0.0)S(0.0)IQNS(0.99)PKLT(0.99)PK K:TMT10,s:Phosphorylated S,t:Phosphorylated T ABCC5 161741.5 9 10 1666.1 122.51 HUMAN 1 11.0779 -1.0995 SHSSKTRSLVGGLLQ-p P52948;S1043-p SHSSKTRSLVGGLLQ 0.400124584561269 0.917202802589914 0.139333333333333 0.0116666666666667 7.33800673156577 0.528759474778532 0.139333333333333 0.0116666666666667 0.184586241476178 0.885368471683094 1.52005936949185 0.151088053108197 P52948 NUP98 P52948.S1043.p_NUP98 P52948_S1043s _1_1_1043_1043 P52948 P52948|P52948-5|P52948-2|P52948-6 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22063.22063.2 13.31 13.31 13.312 2 1 1 0 655.8684 1230.7619 S1043s Hydrogen 1043 (R) sLVGGLLQSK (F) S(0.99)LVGGLLQS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S NUP98 198716.8 4 19 187.1 472.84 HUMAN 1 7.338 0.5288 SHSSPSVSPSRSHSP-p Q7Z6E9;S1699-p SHSSPSVSPSRSHSP 0.146674740935683 0.418593254762966 0.254333333333333 -0.0926666666666667 16.9392256042368 5.0327878130095 0.254333333333333 -0.0926666666666667 0.0202337993784679 0.313849339275772 3.25067432400883 -1.10983771309034 Q7Z6E9 RBBP6 Q7Z6E9.S1699.p_RBBP6 Q7Z6E9_S1695sS1699s_2_2_1695_1699 Q7Z6E9 Q7Z6E9|Q7Z6E9-2|Q7Z6E9-4 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4277.4277.2 11.57 11.57 1.164 6 2 2 0 879.8751 1598.8084 S1695s S1699s TMT10 1690 (R) NQSHSsPSVsPSR (S) NQS(0.0)HS(0.0)S(0.99)PS(0.0)VS(0.99)PS(0.0)R s:Phosphorylated S RBBP6 202473.6 1 33 27.1 935.6 HUMAN 1 16.9392 -5.0328 SHSYLSDSDTEAKLT-p Q92614;S2043-p SHSYLSDSDTEAKLT 0.191651529590969 0.0124575369107156 0.380666666666667 0.442333333333333 14.0047700343327 26.5793765819709 0.380666666666667 0.442333333333333 0.0397670153168762 0.00219817539229408 2.6937943164224 5.44786437910694 Q92614 MYO18A Q92614.S2043.p_MYO18A Q92614_S2043s _1_1_2043_2043 Q92614 Q92614|Q92614-4|A0A0D9SFK2|Q92614-3|Q92614-2|Q92614-5 Unconventional myosin-XVIIIa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10884.10884.2 14.85 14.85 1.312 7 1 1 0 1070.9967 2061.0177 S2043s TMT10 2035 (R) YSHSYLSDsDTEAK (L) Y(0.0)S(0.0)HS(0.0)Y(0.0)LS(0.0)DS(0.99)DT(0.0)EAK K:TMT10,s:Phosphorylated S MYO18A 234309.1 3 15 783.1 225.59 HUMAN 1 14.0048 26.5794 SHTGFCQSSGDEALS-p P46100;S1244-p SHTGFCQSSGDEALS 0.518852766909706 0.0305140104862788 -0.105 0.318 5.26244503530046 20.4802788386913 -0.105 0.318 0.297684002586178 0.00895307280516907 -1.15194237188905 3.97895200481723 P46100 ATRX P46100.S1244.p_ATRX P46100_S1244sS1245s_2_2_1244_1245 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24341.24341.5 18.84 18.84 4.595 7 2 2 0 751.1782 3591.9296 S1244s S1245s TMT10 1226 (K) IKPVTENLVLSSHTGFCQssGDEALSK (S) IKPVT(0.0)ENLVLS(0.0)S(0.0)HT(0.0)GFCQS(0.99)S(0.99)GDEALS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ATRX 285034.2 3 55 18.1 1035.36 HUMAN 1 -5.2624 20.4803 SHVQNKGTPPPKVWF-p Q9NZB2-6;T131-p SHVQNKGTPPPKVWF 0.34689437832203 0.0630771977951708 -0.141666666666667 0.217333333333333 8.5423781454803 15.9786885120616 -0.141666666666667 0.217333333333333 0.13988211348203 0.0252424293145101 -1.72914437548378 3.06193934084532 Q9NZB2 FAM120A Q9NZB2.6.T131.p_FAM120A Q9NZB2-6_T131t _1_1_131_131 Q9NZB2-6 Q9NZB2-6|Q9NZB2-4|Q9NZB2-5|Q9NZB2-2 Isoform F of Constitutive coactivator of PPAR-gamma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13113.13113.4 18.33 18.33 4.522 3 1 1 0 707.1481 2745.5979 T131t TMT10 117 (R) QTAQQIVSHVQNKGtPPPK (V) QT(0.0)AQQIVS(0.0)HVQNKGT(0.99)PPPK K:TMT10,t:Phosphorylated T FAM120A 126524.7 1 2 839.1 214.86 HUMAN 1 -8.5424 15.9787 SHVRGVGSRGFPLRL-p Q9UI30;S18-p SHVRGVGSRGFPLRL 0.354856925059928 0.74864043091369 -0.14 -0.042 8.36067608561038 1.73700883979973 -0.14 -0.0419999999999999 0.145858717782206 0.670346144722583 -1.69767773515645 -0.449689844094064 Q9UI30 TRMT112 Q9UI30.S18.p_TRMT112 Q9UI30_S18s _1_1_18_18 Q9UI30 Q9UI30|Q9UI30-2|F5GX77 Multifunctional methyltransferase subunit TRM112-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12586.12586.3 8.04 3.69 99 1 1 1 0 452.2448 1274.7531 S18s TMT10 15 (R) GVGsRGFPLR (L) GVGS(1.0)RGFPLR s:Phosphorylated S TRMT112 14313.2 2 1 3693.1 45.14 HUMAN 1 -8.3607 -1.737 SHVSPGATKIAVHSP-p Q9NXL9;T946-p SHVSPGATKIAVHSP 0.795842244766724 0.776385332570271 -0.0673333333333333 -0.056 1.91668976967584 1.52048505641537 -0.0673333333333333 -0.056 0.643177766222508 0.704614367344056 -0.490272315544061 -0.399738998104072 Q9NXL9 MCM9 Q9NXL9.T946.p_MCM9 Q9NXL9_S942sT946t_2_2_942_946 Q9NXL9 Q9NXL9|Q9NXL9-4 DNA helicase MCM9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17016.17016.4 7.62 7.62 7.618 5 2 2 0 731.8704 2764.5349 S942s T946t TMT10 929 (K) SKLIHSFEDHSHVsPGAtK (I) S(0.0)KLIHS(0.0)FEDHS(0.0)HVS(0.99)PGAT(0.99)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T MCM9 128793.8 2 8 1757.1 117.14 HUMAN 1 -1.9167 -1.5205 SIADFLNSDEEEDRV-p Q15649;S80-p SIADFLNSDEEEDRV 0.408908657626615 0.0682144420747053 -0.119666666666667 -0.218 7.16315826163055 15.5126804177149 -0.119666666666667 -0.218 0.19216937330372 0.0281016589162057 -1.48954407091179 -2.97314730093372 Q15649 ZNHIT3 Q15649.S80.p_ZNHIT3 Q15649_S80s _1_1_80_80 Q15649 Q15649|Q15649-2 Zinc finger HIT domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24310.24310.5 26.88 20.14 6.705 4 1 1 0 955.6882 4694.4455 S80s TMT10 61 (K) TVKPVENKDDDDSIADFLNsDEEEDRVSLQNLK (N) T(0.0)VKPVENKDDDDS(0.0)IADFLNS(0.99)DEEEDRVS(0.0)LQNLK K:TMT10,s:Phosphorylated S ZNHIT3 18177.5 3 1 4771.1 26.88 HUMAN 1 -7.1632 -15.5127 SIAGASASPKEKYSL-p P15924;S2024-p SIAGASASPKEKYSL 0.541386275750762 0.225671825599469 -0.0996666666666667 0.175 4.91543427901073 8.51566229960842 -0.0996666666666667 0.175 0.322445686899451 0.140745257530798 -1.08853796273509 1.7239345922181 P15924 DSP P15924.S2024.p_DSP P15924_S2024s _1_1_2024_2024 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9730.9730.2 12.96 12.96 1.127 3 1 1 0 806.4294 1531.8844 S2024s TMT10 2014 (R) GAGSIAGASAsPK (E) GAGS(0.0)IAGAS(0.0)AS(0.99)PK K:TMT10,s:Phosphorylated S DSP 334221.3 7 11 104.1 590.4 HUMAN 1 -4.9154 8.5157 SIAKRLQSIGTENTE-p P04075;S46-p SIAKRLQSIGTENTE 0.112507468607091 0.00971111834999003 0.320666666666667 0.523333333333333 19.8194440854164 28.3437942188954 0.320666666666667 0.523333333333333 0.010424508587991 0.00146426802248419 3.84030783004691 5.93489320666682 P04075 ALDOA P04075.S46.p_ALDOA P04075_S46s _1_1_46_46 P04075 P04075-2|J3KPS3|H3BQN4|P00883 Fructose-bisphosphate aldolase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9094.9094.3 13.62 13.62 2.229 3 1 1 0 652.6515 1875.9722 S46s TMT10 44 (R) LQsIGTENTEENRR (F) LQS(0.99)IGT(0.0)ENT(0.0)EENRR s:Phosphorylated S ALDOA 39875.7 4 3 1050.1 183.91 HUMAN 1 19.8194 28.3438 SIASDPKSFHGLDFG-p Q9UPV0;S407-p SIASDPKSFHGLDFG 0.0732853965819104 0.111211777557805 -0.765 0.358 24.394962175536 12.5910719491501 -0.765 0.358 0.00363499470396293 0.0550671759845053 -4.89215346483225 2.43634796687901 Q9UPV0 CEP164 Q9UPV0.S407.p_CEP164 Q9UPV0_S407s _1_1_407_407 Q9UPV0 Q9UPV0|Q9UPV0-2 Centrosomal protein of 164 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23920.23920.3 12.65 12.65 99 1 1 1 0 497.9044 1411.732 S407s TMT10 407 (K) sFHGLDFGFR (S) S(1.0)FHGLDFGFR s:Phosphorylated S CEP164 164824.4 1 2 1433.1 142.71 HUMAN 1 -24.395 12.5911 SIDKSTETDNGYVSL-p Q8N3S3;T273-p SIDKSTETDNGYVSL 0.349608728294085 0.990516180488175 -0.152666666666667 0.00266666666666667 8.478023306753 0.0600402470567058 -0.152666666666667 0.00266666666666664 0.141970355335468 0.986270345597406 -1.71800109105187 0.0180161669481433 Q8N3S3 PHTF2 Q8N3S3.T273.p_PHTF2 Q8N3S3_T273tS279s_2_2_273_279 Q8N3S3 Q8N3S3|Q8N3S3-2 Putative homeodomain transcription factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15653.15653.4 11.27 11.27 2.176 5 2 2 0 616.0513 2301.2541 T273t S279s TMT10 270 (K) STEtDNGYVsLDGKK (T) S(0.0)T(0.0)ET(0.99)DNGY(0.0)VS(0.99)LDGKK K:TMT10,t:Phosphorylated T,s:Phosphorylated S PHTF2 89782.6 1 2 3885.1 41.39 HUMAN 1 -8.478 0.06 SIDNIDGTPVRDERS-p Q5VT52;T723-p SIDNIDGTPVRDERS 0.298571414929819 0.0589606781369833 0.146 0.291333333333333 9.86872945689035 16.3787779888137 0.146 0.291333333333333 0.103068760746412 0.0230208948471088 1.95891305094495 3.13897830228965 Q5VT52 RPRD2 Q5VT52.T723.p_RPRD2 Q5VT52_T723t _1_1_723_723 Q5VT52 Q5VT52|Q5VT52-3|Q5VT52-2|Q5VT52-5 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11491.11491.4 19.58 19.58 3.99 5 1 1 0 585.5319 2259.1414 T723t TMT10 711 (R) GPTSTSIDNIDGtPVRDER (S) GPT(0.0)S(0.0)T(0.0)S(0.0)IDNIDGT(0.99)PVRDER t:Phosphorylated T RPRD2 156473.2 3 15 172.1 488.65 HUMAN 1 9.8687 16.3788 SIDSLDLSCEEGTPL-p Q14980;S1728-p SIDSLDLSCEEGTPL 0.569246194913171 0.0575073175770347 -0.0893333333333333 0.266333333333333 4.50151950246606 16.5238956601036 -0.0893333333333333 0.266333333333333 0.35468926941702 0.0222643711939387 -1.01186126899413 3.16711203664844 Q14980 NUMA1 Q14980.S1728.p_NUMA1 Q14980_S1728s _1_1_1728_1728 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.34897.34897.3 11.09 11.09 1.195 7 1 1 0 1086.2101 3176.6648 S1728s TMT10 1716 (K) PQLDLSIDSLDLsCEEGTPLSITSK (L) PQLDLS(0.0)IDS(0.0)LDLS(0.99)CEEGT(0.0)PLS(0.0)IT(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NUMA1 239339.3 3 17 31.1 900.97 HUMAN 1 -4.5015 16.5239 SIEFGQESPEQSLAM-p P46821;S1653-p SIEFGQESPEQSLAM 0.236551014520431 0.118258433558303 0.199666666666667 0.195666666666667 11.997882168736 12.2254163165814 0.199666666666667 0.195666666666667 0.0631265105023345 0.0599043511287054 2.33195893997966 2.37117276658665 P46821 MAP1B P46821.S1653.p_MAP1B P46821_S1653s _1_1_1653_1653 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27586.27586.3 16.49 16.49 4.211 7 1 1 0 1039.4484 3036.3764 S1653s TMT10 1640 (R) SEQSSMSIEFGQEsPEQSLAMDFSR (Q) S(0.0)EQS(0.0)S(0.0)MS(0.0)IEFGQES(0.99)PEQS(0.0)LAMDFS(0.0)R s:Phosphorylated S MAP1B 271827.6 1 15 210.1 442.48 HUMAN 1 11.9979 12.2254 SIELLQHSLPKINRS-p P04049-2;S632-p SIELLQHSLPKINRS 0.79354197059539 0.0384049652935769 -0.048 0.288666666666667 1.93821424468467 19.0170001664534 -0.048 0.288666666666667 0.63999793916777 0.0125400706518542 -0.495075246448169 3.66787261828783 P04049 RAF1 P04049.2.S632.p_RAF1 P04049-2_S632s _1_1_632_632 P04049-2 P04049-2 Isoform 2 of RAF proto-oncogene serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35104.35104.4 19.39 15.25 7.735 3 1 1 0 778.9341 3032.7549 S632s TMT10 614 (K) EERPLFPQILSSIELLQHsLPK (I) EERPLFPQILS(0.0)S(0.0)IELLQHS(0.99)LPK K:TMT10,s:Phosphorylated S RAF1 76249.7 1 9 441.4 311.96 HUMAN 1 -1.9382 19.017 SIETDRVSKEFIEFL-p Q9UJ41;S317-p SIETDRVSKEFIEFL 0.201924458418182 0.888294370092233 -0.211333333333333 -0.0146666666666666 13.495261183755 0.722674527930466 -0.211333333333333 -0.0146666666666666 0.0447171258198055 0.846705824320301 -2.60070507346816 -0.202771188294661 Q9UJ41 RABGEF1 Q9UJ41.S317.p_RABGEF1 Q9UJ41_S317s _1_1_317_317 Q9UJ41 Q9UJ41|Q9UJ41-3|Q9UJ41-4|E9PFK9|Q9UJ41-2 Rab5 GDP/GTP exchange factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8107.8107.3 10.49 10.49 2.303 4 1 1 0 601.321 1721.9798 S317s TMT10 308 (R) QTSIETDRVsK (E) QT(0.0)S(0.0)IET(0.0)DRVS(0.99)K K:TMT10,s:Phosphorylated S RABGEF1 80625 2 3 1593.1 129.22 HUMAN 1 -13.4953 -0.7227 SIETLSNSSGSTSGS-p Q9H6U6;S893-p SIETLSNSSGSTSGS 0.138406999744561 0.373389139453331 0.324666666666667 0.104 17.5904466588145 5.67625599649839 0.324666666666667 0.104 0.0174162774300435 0.270629042104092 3.37984868938558 1.2263920636061 Q9H6U6 BCAS3 Q9H6U6.S893.p_BCAS3 Q9H6U6_S893s _1_1_893_893 Q9H6U6 Q9H6U6-8|Q9H6U6-3|Q9H6U6-2|K7ESE9|Q9H6U6-6 Breast carcinoma-amplified sequence 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14448.14448.3 12.16 12.16 1.218 9 1 1 0 759.0266 2195.0989 S893s TMT10 884 (R) EGSIETLSNsSGSTSGSIPR (N) EGS(0.0)IET(0.0)LS(0.0)NS(0.99)S(0.0)GS(0.0)T(0.0)S(0.0)GS(0.0)IPR s:Phosphorylated S BCAS3 102547.1 1 11 847.1 212.9 HUMAN 1 17.5904 5.6763 SIEVSDDTDQEEEEA-p Q6UWV2;T207-p SIEVSDDTDQEEEEA 0.404577762556746 0.109187450709599 0.146 0.216666666666667 7.25656980014312 12.7071777001243 0.146 0.216666666666667 0.188080174903627 0.0536144962721109 1.50585387461318 2.45712139129518 Q6UWV2 MPZL3 Q6UWV2.T207.p_MPZL3 Q6UWV2_T207t _1_1_207_207 Q6UWV2 Q6UWV2|Q6UWV2-2 Myelin protein zero-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12245.12245.3 22.34 22.34 4.09 4 1 1 0 989.7719 2887.3338 T207t TMT10 198 (K) KSSIEVSDDtDQEEEEACMAR (L) KS(0.0)S(0.0)IEVS(0.0)DDT(0.99)DQEEEEACMAR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T MPZL3 26387.6 4 1 3431.1 51.22 HUMAN 1 7.2566 12.7072 SIFDANESGFESYEA-p P26358;S394-p SIFDANESGFESYEA 0.848075740909989 0.0107838546200267 -0.0273333333333333 -0.478 1.38429483063054 27.5723126723014 -0.0273333333333333 -0.478 0.727060443341796 0.00174891512148837 -0.367678383061672 -5.7180649089031 P26358 DNMT1 P26358.S394.p_DNMT1 P26358_S394s _1_1_394_394 P26358 P26358-2|P26358-3 DNA (cytosine-5)-methyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27917.27917.4 22.66 22.66 3.362 4 1 1 0 730.8619 2840.4507 S394s TMT10 386 (K) LSIFDANEsGFESYEALPQHK (L) LS(0.0)IFDANES(0.99)GFES(0.0)Y(0.0)EALPQHK K:TMT10,s:Phosphorylated S DNMT1 185501.2 2 8 431.1 316.29 HUMAN 1 -1.3843 -27.5723 SIFIKPKSMENIMEM-p Q12959-2;S856-p SIFIKPKSMENIMEM 0.3626106053244 0.00792052213892768 -0.203333333333333 0.465333333333333 8.18577901417877 29.9722427545966 -0.203333333333333 0.465333333333333 0.151852553262477 0.00100641181015799 -1.6673738071658 6.41352933735821 Q12959 DLG1 Q12959.2.S856.p_DLG1 Q12959-2_S856s _1_1_856_856 Q12959-2 Q12959-2|Q12959-7|Q12959-4|A0A0C4DFT3|Q12959-6|Q12959-3|Q12959-5|Q12959-9|Q12959-8 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21427.21427.3 14.27 14.27 99 1 1 1 0 588.943 1684.8473 S856s TMT10 856 (K) sMENIMEMNK (R) S(1.0)MENIMEMNK K:TMT10,s:Phosphorylated S DLG1 103604.4 2 25 196.1 460.79 HUMAN 1 -8.1858 29.9722 SIGESFGTSEKFQKI-p P06400;T841-p SIGESFGTSEKFQKI 0.177952626351024 0.00224652614039878 -0.234333333333333 -0.744666666666667 14.8316433162686 41.0492825084226 -0.234333333333333 -0.744666666666667 0.0328727221050692 7.85365372960297e-05 -2.84693497258132 -10.613533093456 P06400 RB1 P06400.T841.p_RB1 P06400_T841t _1_1_841_841 P06400 P06400 Retinoblastoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29160.29160.3 16.55 16.55 1.498 4 1 1 0 669.0263 1925.0996 T841t TMT10 831 (R) ILVSIGESFGtSEK (F) ILVS(0.0)IGES(0.0)FGT(0.99)S(0.0)EK K:TMT10,t:Phosphorylated T RB1 107013.3 2 13 155.1 502.88 HUMAN 1 -14.8316 -41.0493 SIGNITLSPAISRHS-p Q0JRZ9;S387-p SIGNITLSPAISRHS 0.389389394272965 0.00383473386221413 -0.187666666666667 -0.720333333333333 7.57772835943679 35.7701213701256 -0.187666666666667 -0.720333333333333 0.174673556950088 0.000264842612332069 -1.56180964633973 -8.38208831655761 Q0JRZ9 FCHO2 Q0JRZ9.S387.p_FCHO2 Q0JRZ9_S387s _1_1_387_387 Q0JRZ9 Q0JRZ9|Q0JRZ9-3 F-BAR domain only protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26180.26180.3 18.86 18.86 2.668 4 1 1 0 579.6554 1656.9846 S387s TMT10 379 (K) VSIGNITLsPAISR (H) VS(0.0)IGNIT(0.0)LS(0.99)PAIS(0.0)R s:Phosphorylated S FCHO2 89436.3 2 3 864.1 210.2 HUMAN 1 -7.5777 -35.7701 SIGSRKASVVDPSTE-p Q66K14;S411-p SIGSRKASVVDPSTE 0.557001864801171 0.0114918904032358 0.439333333333333 0.521 4.6936252552911 27.1407036871981 0.439333333333333 0.521 0.339341890086299 0.00193165530561695 1.04760186586044 5.59941303870947 Q66K14 TBC1D9B Q66K14.S411.p_TBC1D9B Q66K14_S411s _1_1_411_411 Q66K14 Q66K14|Q66K14-2 TBC1 domain family member 9B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14345.14345.3 24.86 24.86 1.706 10 1 1 0 1240.281 3638.855 S411s TMT10 409 (R) KAsVVDPSTESSPAPQEGSEQPASPASPLSSR (Q) KAS(0.99)VVDPS(0.0)T(0.0)ES(0.0)S(0.0)PAPQEGS(0.0)EQPAS(0.0)PAS(0.0)PLS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S TBC1D9B 141663.3 2 5 988.1 191.79 HUMAN 1 4.6936 27.1407 SIHFVPGSCRLVEEE-p Q9NZL9;S16-p SIHFVPGSCRLVEEE 0.850108893774089 0.132411490459811 0.0356666666666667 0.164333333333333 1.3654254300118 11.574435177433 0.0356666666666667 0.164333333333333 0.730226277221144 0.0695915456240828 0.36318635112864 2.25599160624201 Q9NZL9 MAT2B Q9NZL9.S16.p_MAT2B Q9NZL9_S16s _1_1_16_16 Q9NZL9 Q9NZL9 Methionine adenosyltransferase 2 subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19114.19114.3 10.24 10.24 10.242 2 1 1 0 570.9473 1630.8573 S16s TMT10 7 (K) ELSIHFVPGsCR (L) ELS(0.0)IHFVPGS(0.99)CR C:Carbamidomethylation,s:Phosphorylated S MAT2B 37893.4 1 1 3673.1 45.59 HUMAN 1 1.3654 11.5744 SIIIRVQSPDGVKRI-p Q8TAT6-2;S11-p SIIIRVQSPDGVKRI 0.114688242267433 0.00399065362481503 0.536 -1.09 19.5783797447538 35.3640551719885 0.536 -1.09 0.0110195034580614 0.000290800053978573 3.78904467962199 -8.22920509872295 Q8TAT6 NPLOC4 Q8TAT6.2.S11.p_NPLOC4 Q8TAT6-2_S11s _1_1_11_11 Q8TAT6-2 Q8TAT6-2|I3L4U9|A0A0D9SFI9 Isoform 2 of Nuclear protein localization protein 4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6439.6439.3 9.58 5.68 99 1 1 1 0 508.6158 1443.8684 S11s TMT10 9 (R) VQsPDGVKR (I) VQS(1.0)PDGVKR K:TMT10,s:Phosphorylated S NPLOC4 70258.3 1 1 5537.1 18.41 HUMAN 1 19.5784 -35.3641 SIIPRPRSPNMQDLK-p Q6T310;S217-p SIIPRPRSPNMQDLK 0.107930259374796 0.0480181724894645 -0.396 -0.396666666666667 20.3645418944896 17.6380920317838 -0.396 -0.396666666666667 0.00919487459701227 0.01722625202668 -3.95762543306967 -3.38668627747218 Q6T310 RASL11A Q6T310.S217.p_RASL11A Q6T310_S217s _1_1_217_217 Q6T310 Q6T310 Ras-like protein family member 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16338.16338.4 11.77 11.77 11.77 2 1 1 0 591.0781 2281.3215 S217s TMT10 209 (R) ASIIPRPRsPNMQDLK (R) AS(0.0)IIPRPRS(0.99)PNMQDLK K:TMT10,s:Phosphorylated S RASL11A 27176.8 1 1 6428.1 11.77 HUMAN 1 -20.3645 -17.6381 SIKAFKESPKQILDP-p P46013;S2528-p SIKAFKESPKQILDP 0.220879983269058 0.00433927353594864 0.199666666666667 -0.802 12.6255475383674 34.717093683071 0.199666666666667 -0.802 0.0546317668338583 0.000337513098284906 2.44380642123622 -7.99064435769721 P46013 MKI67 P46013.S2528.p_MKI67 P46013_S2528s _1_1_2528_2528 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18312.18312.5 16.18 10.36 14.916 4 1 1 0 605.9422 2945.714 S2528s TMT10 2524 (K) AFKEsPKQILDPAASVTGSRR (Q) AFKES(0.99)PKQILDPAAS(0.0)VT(0.0)GS(0.0)RR K:TMT10,s:Phosphorylated S MKI67 360912.4 10 88 5.1 1918.46 HUMAN 1 12.6255 -34.7171 SIKKQPDSPAGSTTS-p Q6ZSZ6;S489-p SIKKQPDSPAGSTTS 0.885585284476882 0.00508786135659444 0.0273333333333333 0.620666666666667 1.04134111695248 33.3946469325252 0.0273333333333333 0.620666666666667 0.786802784651877 0.000457651939007801 0.284216503653381 7.5215054367706 Q6ZSZ6 TSHZ1 Q6ZSZ6.S489.p_TSHZ1 Q6ZSZ6_S489s _1_1_489_489 Q6ZSZ6 Q6ZSZ6|Q6ZSZ6-2 Teashirt homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6413.6413.3 9.49 9.49 1.167 5 1 1 0 777.0677 2249.2228 S489s TMT10 485 (K) KQPDsPAGSTTSEEK (K) KQPDS(0.99)PAGS(0.0)T(0.0)T(0.0)S(0.0)EEK K:TMT10,s:Phosphorylated S TSHZ1 118884.1 1 2 4512.1 30.47 HUMAN 1 1.0413 33.3946 SIKPQKISIPDVGLH-p Q09666;S1452-p SIKPQKISIPDVGLH 0.585329136085302 0.00167082213187757 -0.100666666666667 1.139 4.27891252136641 44.1197285641289 -0.100666666666667 1.139 0.373343631789029 3.87281849443092e-05 -0.970082481677926 12.1491382780941 Q09666 AHNAK Q09666.S1452.p_AHNAK Q09666_S1452s _1_1_1452_1452 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27257.27257.3 19.18 13.03 99 1 1 1 0 577.3382 1650.0354 S1452s TMT10 1451 (K) IsIPDVGLHLK (G) IS(1.0)IPDVGLHLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 57 1.1 4313.36 HUMAN 1 -4.2789 44.1197 SIKPVTPSPSKLVTS-p Q9H792;S854-p SIKPVTPSPSKLVTS 0.0629489541987992 0.00413791477536262 -0.548666666666667 -0.679 26.0879984715682 35.0767831408318 -0.548666666666667 -0.679 0.00246150177252081 0.00031068600158358 -5.3247169332235 -8.12252316557574 Q9H792 PEAK1 Q9H792.S854.p_PEAK1 Q9H792_S854s _1_1_854_854 Q9H792 Q9H792|H0YN99 Pseudopodium-enriched atypical kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14166.14166.4 14.53 14.53 3.483 4 1 1 0 530.8048 2040.2308 S854s TMT10 845 (K) DPSIKPVTPsPSK (L) DPS(0.0)IKPVT(0.0)PS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S PEAK1 195156.9 3 11 583.1 265.81 HUMAN 1 -26.088 -35.0768 SIKSEPISPPRDRMT-p Q02078-2;S406-p SIKSEPISPPRDRMT 0.759287965351101 0.0541453769156041 -0.0613333333333333 0.241333333333333 2.29215819973677 16.8822731094609 -0.0613333333333334 0.241333333333333 0.589907856236285 0.0205008887571565 -0.572572700147296 3.23703803535291 Q02078 MEF2A Q02078.2.S406.p_MEF2A Q02078-2_S406s _1_1_406_406 Q02078-2 Q02078|Q02078-2|Q02078-5|Q02078-3|Q02078-6|Q02078-4|Q02078-7|Q02078-8 Isoform MEFA of Myocyte-specific enhancer factor 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6997.6997.3 10.91 10.91 1.496 2 1 1 0 488.2465 1382.7589 S406s TMT10 402 (K) SEPIsPPRDR (M) S(0.0)EPIS(0.99)PPRDR s:Phosphorylated S MEF2A 54612.1 3 8 2279.1 89.95 HUMAN 1 -2.2922 16.8823 SIKSRTHSVSADPSC-p Q6F5E8;S1268-p SIKSRTHSVSADPSC 0.657592622082227 0.723381537131527 0.0943333333333333 -0.0343333333333333 3.41366581154822 1.93519122442392 0.0943333333333334 -0.0343333333333333 0.455652144761703 0.640443581544638 0.803249912835593 -0.494344634882257 Q6F5E8 RLTPR Q6F5E8.S1268.p_RLTPR Q6F5E8_S1268s _1_1_1268_1268 Q6F5E8 Q6F5E8|Q6F5E8-2 Capping protein, Arp2/3 and myosin-I linker protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10225.10225.4 18.1 18.1 1.147 7 1 1 0 784.3744 3054.5104 S1268s TMT10 1266 (R) THsVSADPSCRPGPGSQGPESATWK (T) T(0.0)HS(0.99)VS(0.0)ADPS(0.0)CRPGPGS(0.0)QGPES(0.0)AT(0.0)WK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CARMIL2 156226.7 2 3 2015.1 102.3 HUMAN 1 3.4137 -1.9352 SIKVEMYSDEESSRL-p Q9H2S9;S105-p SIKVEMYSDEESSRL 0.800325882980012 0.866483797425873 -0.0356666666666667 -0.02 1.86287442031378 0.876770160482113 -0.0356666666666667 -0.02 0.651197250157754 0.817189887938122 -0.478215803824457 -0.242651794903404 Q9H2S9 IKZF4 Q9H2S9.S105.p_IKZF4 Q9H2S9_S105s _1_1_105_105 Q9H2S9 Q9H2S9 Zinc finger protein Eos HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18788.18788.3 19.44 19.44 3.943 7 1 1 0 890.7635 2590.3071 S105s TMT10 93 (R) SLSANSIKVEMYsDEESSR (L) S(0.0)LS(0.0)ANS(0.0)IKVEMY(0.0)S(0.99)DEES(0.0)S(0.0)R K:TMT10,s:Phosphorylated S IKZF4 65303 1 8 2223.1 92.84 HUMAN 1 -1.8629 -0.8768 SILAPVRSPQGPSPV-p Q99638;S375-p SILAPVRSPQGPSPV 0.379185107920536 0.0660840635677049 0.161333333333333 0.230333333333333 7.78192479610361 15.6928719330785 0.161333333333333 0.230333333333333 0.166650845117206 0.0269595604208084 1.59730613463485 3.00736349996634 Q99638 RAD9A Q99638.S375.p_RAD9A Q99638_S375s _1_1_375_375 Q99638 Q99638 Cell cycle checkpoint control protein RAD9A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.35885.35885.4 14.79 14.79 1.126 5 1 1 0 813.907 3172.6364 S375s TMT10 363 (R) SLFFGSILAPVRsPQGPSPVLAEDSEGEG (-) S(0.0)LFFGS(0.0)ILAPVRS(0.99)PQGPS(0.0)PVLAEDS(0.0)EGEG s:Phosphorylated S RAD9A 43117.2 3 4 1917.1 107.16 HUMAN 1 7.7819 15.6929 SILEKQASVAAENSV-p P98174;S816-p SILEKQASVAAENSV 0.702883247704392 0.44914329590855 0.0643333333333333 -0.112666666666667 2.87807663843649 4.63320578079346 0.0643333333333333 -0.112666666666667 0.515456874614821 0.344095839792771 0.695537594022796 -1.03619425115214 P98174 FGD1 P98174.S816.p_FGD1 P98174_S816s _1_1_816_816 P98174 P98174 FYVE, RhoGEF and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.36399.36399.3 23.58 23.58 3.484 4 1 1 0 941.4595 2742.3995 S816s TMT10 814 (K) QAsVAAENSVICSFLHYMEK (G) Q(0.0)AS(0.99)VAAEN(0.0)S(0.0)VICS(0.0)FLHY(0.0)M(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FGD1 107757.1 6 10 1189.1 168.38 HUMAN 1 2.8781 -4.6332 SILHQGITRKNPRTP-p H3BMM1;T390-p SILHQGITRKNPRTP 0.179935774950283 0.362634117704378 0.217 0.105 14.6977520354571 5.84192258650742 0.217 0.105 0.0339019591667338 0.260500008225807 2.82195419269819 1.25606028333646 H3BMM1 NotFound H3BMM1.T390.p_NotFound H3BMM1_T381tS383sT390t_3_3_381_390 H3BMM1 H3BMM1 Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19088.19088.4 7.04 7.04 7.044 4 3 3 0 828.4253 3070.7712 T381t S383s T390t TMT10 371 (K) LLSHIHLEMEtRsILHQGItRK (N) LLS(0.0)HIHLEMET(0.99)RS(0.99)ILHQGIT(0.99)RK K:TMT10,t:Phosphorylated T,s:Phosphorylated S MYO9A 151307 1 23 457.2 306.95 HUMAN 1 14.6978 5.8419 SILKPPRSPLQDLRG-p Q8NG31;S32-p SILKPPRSPLQDLRG 0.226360812769627 0.00390851163108543 0.204 -0.632 12.3923724853755 35.5346713044466 0.204 -0.632 0.0576451470601748 0.000279597233259408 2.40213019414421 -8.29314209581458 Q8NG31 CASC5 Q8NG31.S32.p_CASC5 Q8NG31_S32s _1_1_32_32 Q8NG31 Q8NG31|Q8NG31-2|Q8NG31-4|Q8NG31-3|E9PPJ1|H0YN41 Kinetochore scaffold 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14059.14274.4 11.85 11.85 3.258 3 1 1 0 596.3416 2302.376 S32s TMT10 23 (R) HSSILKPPRsPLQDLR (G) HS(0.0)S(0.0)ILKPPRS(0.99)PLQDLR K:TMT10,s:Phosphorylated S KNL1 268353.4 3 1 650.1 254.2 HUMAN 1 12.3924 -35.5347 SILLQENTFVEQVVN-p Q8IWJ2;T324-p SILLQENTFVEQVVN 0.188214971231843 0.0789167244059908 0.379333333333333 0.923333333333333 14.232689539989 14.6389362033145 0.379333333333333 0.923333333333334 0.037733843683215 0.0343642112121727 2.73574160053863 2.8092244066274 Q8IWJ2 GCC2 Q8IWJ2.T324.p_GCC2 Q8IWJ2_S317sT324t_2_2_317_324 Q8IWJ2 Q8IWJ2 GRIP and coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29789.29789.4 7.86 2.32 1.151 4 2 2 0 1014.4787 3893.0115 S317s N323n T324t N331n Hydrogen 304 (R) KATSNANQDNQICsILLQEntFVEQVVnEK (V) KAT(0.0)S(0.0)N(0.0)AN(0.0)QDN(0.0)QICS(0.99)ILLQEN(0.99)T(0.99)FVEQVVN(0.99)EK K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T GCC2 196990.2 1 94 9.3 1298.62 HUMAN 1 14.2327 14.6389 SILNTWISLKQADKK-p P22234-2;S419-p SILNTWISLKQADKK 0.79189855843937 0.250149310733292 0.053 0.221666666666667 1.95523062906745 7.92933794337245 0.053 0.221666666666667 0.637495226394889 0.161089118743475 0.49886455721213 1.62239073512124 P22234 PAICS P22234.2.S419.p_PAICS P22234-2_S419s _1_1_419_419 P22234-2 P22234-2|D6RF62 Isoform 2 of Multifunctional protein ADE2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.32750.32750.3 10.99 10.99 2.108 3 1 1 0 595.3439 1704.046 S419s TMT10 411 (R) ASILNTWIsLK (Q) AS(0.0)ILNT(0.0)WIS(0.99)LK K:TMT10,s:Phosphorylated S PAICS 48699 1 8 991.1 191.33 HUMAN 1 1.9552 7.9293 SILPYPVSPKQKYSH-p Q8IWI9-4;S924-p SILPYPVSPKQKYSH 0.905522607121834 0.0195304420076309 -0.02 -0.357666666666667 0.845982152484628 23.4674910167055 -0.02 -0.357666666666667 0.823003694438878 0.00450039774423622 -0.234785580413801 -4.66046222338767 Q8IWI9 MGA Q8IWI9.4.S924.p_MGA Q8IWI9-4_S924s _1_1_924_924 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24121.24327.2 13.52 11.27 4.816 3 1 1 0 819.9678 1558.9609 S924s TMT10 917 (K) SILPYPVsPK (Q) S(0.0)ILPY(0.0)PVS(0.99)PK K:TMT10,s:Phosphorylated S MGA 338321.5 5 9 141.1 523.06 HUMAN 1 -0.846 -23.4675 SILSPGGSCGPIKVK-p P78347;S214-p SILSPGGSCGPIKVK 0.1768008818503 0.0854573914426086 0.226 0.234333333333333 14.9250478301124 14.1391672100032 0.226 0.234333333333333 0.0321732709914287 0.0385552282920354 2.86440561551303 2.71685631035442 P78347 GTF2I P78347.S214.p_GTF2I P78347_S214s _1_1_214_214 P78347 P78347|P78347-3|P78347-4|P78347-2|P78347-5 General transcription factor II-I HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20343.20343.2 13.97 8.15 2.192 3 1 1 0 905.9799 1730.9875 S214s TMT10 207 (R) SILSPGGsCGPIK (V) S(0.0)ILS(0.0)PGGS(0.99)CGPIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GTF2I 112927.8 2 4 140.1 523.54 HUMAN 1 14.925 14.1392 SILSRTPSVAKSPEA-p Q9UI08-2;S347-p SILSRTPSVAKSPEA 0.0813263831752068 0.0316339171991764 0.479666666666667 -0.416 23.2859232960861 20.2633742681348 0.479666666666667 -0.416 0.004692536618942 0.00941158075895426 4.62234665938588 -3.93196138367722 Q9UI08 EVL Q9UI08.2.S347.p_EVL Q9UI08-2_S347s _1_1_347_347 Q9UI08-2 Q9UI08-2|Q9UI08-3|Q9UI08-4 Isoform 1 of Ena/VASP-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9847.9847.4 10.46 10.46 1.798 3 1 1 0 471.2714 1802.0991 S347s TMT10 345 (R) TPsVAKSPEAK (S) T(0.0)PS(0.99)VAKS(0.0)PEAK K:TMT10,s:Phosphorylated S EVL 44905.3 1 5 2000.1 103.33 HUMAN 1 23.2859 -20.2634 SILTRGDSIGSSKGG-p B5MCU0;S375-p SILTRGDSIGSSKGG 0.198291367686798 0.275769462629812 -0.22 -0.194 13.6961049497348 7.37265496936005 -0.22 -0.194 0.0426962276136813 0.183119461722139 -2.63729035107044 -1.52565538827322 B5MCU0 NotFound B5MCU0.S375.p_NotFound B5MCU0_S375s _1_1_375_375 B5MCU0 B5MCG9|B5MCU0|Q9Y2K5|A0A0U1RRA6|Q9Y2K5-2 R3H domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23579.23579.4 15.35 15.35 1.142 8 1 1 0 627.8344 2428.3448 S375s TMT10 361 (K) ASSFSGISILTRGDsIGSSK (G) AS(0.0)S(0.0)FS(0.0)GIS(0.0)ILT(0.0)RGDS(0.99)IGS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S R3HDM2 109377.4 3 8 761.1 230.16 HUMAN 1 -13.6961 -7.3727 SIMKDLHSDDNEEES-p P42568;S412-p SIMKDLHSDDNEEES 0.475489721842475 0.0125588311624891 -0.651333333333333 0.6975 5.94441585312787 26.5135860044987 -0.651333333333334 0.6975 0.25442419828447 0.00223172870547374 -1.27465539096398 6.34703210320945 P42568 MLLT3 P42568.S412.p_MLLT3 P42568_S412s_1_1_412_412 P42568 P42568|P42568-2|B1APT5|A0A0D9SF09 Protein AF-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6366.6366.4 10.54 10.54 3.134 3 1 1 0 940.3723 3662.5106 S412s M431m TMT10 409 (K) DLHsDDNEEESDEVEDNDNDSEmERPVNR (G) DLHS(0.99)DDNEEES(0.0)DEVEDNDNDS(0.0)EM(1.0)ERPVNR s:Phosphorylated S,m:Oxidized methionine MLLT3 63692.6 1 2 2734.1 72.29 HUMAN 1 -5.9444 26.5136 SINHQIESPSERRKS-p Q9UPQ0-4;S985-p SINHQIESPSERRKS 0.319370286133767 0.0454157214584925 0.141666666666667 0.268 9.2810631568186 17.966727708344 0.141666666666667 0.268 0.118003172745681 0.0159708205220468 1.85702781412684 3.45271469479188 Q9UPQ0 LIMCH1 Q9UPQ0.4.S985.p_LIMCH1 Q9UPQ0-4_S985s _1_1_985_985 Q9UPQ0-4 Q9UPQ0-3|G5EA03|Q9UPQ0-4|Q9UPQ0-2 Isoform 4 of LIM and calponin homology domains-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6184.6184.2 17.37 14.05 2 3 1 1 0 853.4118 1625.8445 S985s TMT10 978 (K) SINHQIEsPSER (R) S(0.0)INHQIES(0.99)PS(0.0)ER s:Phosphorylated S LIMCH1 121463.5 3 18 679.1 246.52 HUMAN 1 9.2811 17.9667 SINKRLASPVAPGAL-p Q96L91;S2656-p SINKRLASPVAPGAL 0.446888783137279 0.568662466865634 0.192666666666667 0.0603333333333333 6.45275466041859 3.30373594968058 0.192666666666667 0.0603333333333333 0.226320833539465 0.467332952533188 1.3648380176444 0.781341074645247 Q96L91 EP400 Q96L91.S2656.p_EP400 Q96L91_S2656s _1_1_2656_2656 Q96L91 Q96L91|Q96L91-2 E1A-binding protein p400 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16657.16657.4 18.98 18.98 5.241 5 1 1 0 810.6895 3159.7588 S2656s TMT10 2653 (K) RLAsPVAPGALTTPGGSAPAQVVHTQPPPR (A) RLAS(0.99)PVAPGALT(0.0)T(0.0)PGGS(0.0)APAQVVHT(0.0)QPPPR s:Phosphorylated S EP400 344909.2 1 25 91.1 620.97 HUMAN 1 6.4528 3.3037 SINQILLSPEKIKEG-p Q14997;S1121-p SINQILLSPEKIKEG 0.808989318004032 0.21636220192059 -0.038 -0.210333333333333 1.76830949615043 8.74676797527712 -0.038 -0.210333333333333 0.665532166111577 0.133451420977363 -0.456858416114298 -1.76391303679839 Q14997 PSME4 Q14997.S1121.p_PSME4 Q14997_S1121s _1_1_1121_1121 Q14997 Q14997|Q14997-2 Proteasome activator complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23759.23759.3 11.5 11.5 10.413 2 1 1 0 664.3742 1911.1315 S1121s TMT10 1112 (K) NPSINQILLsPEK (I) NPS(0.0)INQILLS(0.99)PEK K:TMT10,s:Phosphorylated S PSME4 213669.3 2 1 4724.1 27.43 HUMAN 1 -1.7683 -8.7468 SINYTFKTPEKAKEK-p P49792;T2613-p SINYTFKTPEKAKEK 0.885480474668744 0.0011424964448981 -0.028 -1.467 1.04362468867785 48.7973837182376 -0.028 -1.467 0.786389183194423 1.31905112353485e-05 -0.284785705897907 -14.8956635118472 P49792 RANBP2 P49792.T2613.p_RANBP2 P49792_T2613t _1_1_2613_2613 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28517.28517.5 18.42 18.42 1.265 7 1 1 0 664.3447 3237.7287 T2613t TMT10 2595 (K) NLFASFPTEESSINYTFKtPEK (A) NLFAS(0.0)FPT(0.0)EES(0.0)S(0.0)INY(0.0)T(0.0)FKT(0.99)PEK K:TMT10,t:Phosphorylated T RANBP2 362585.9 3 58 9.1 1298.62 HUMAN 1 -1.0436 -48.7974 SIPFIDCSDVDSEYD-p A0A1B0GV68;S491-p SIPFIDCSDVDSEYD 0.335158882684874 0.0549075865221613 0.171333333333333 0.39 8.85704088299512 16.7987214577371 0.171333333333333 0.39 0.130105576588182 0.0208991130022759 1.78361624881333 3.22067781306098 A0A1B0GV68 NotFound A0A1B0GV68.S491.p_NotFound A0A1B0GV68_S491s _1_1_491_491 A0A1B0GV68 A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32154.32154.3 19.79 19.79 4.004 7 1 1 0 929.0884 2705.2814 S491s TMT10 480 (R) GSSTSIPFIDCsDVDSEYDLLR (E) GS(0.0)S(0.0)T(0.0)S(0.0)IPFIDCS(0.99)DVDS(0.0)EY(0.0)DLLR C:Carbamidomethylation,s:Phosphorylated S FARP1 88555.5 5 13 147.1 514.5 HUMAN 1 8.857 16.7987 SIPRAPSSDEECFFD-p A0A0A0MRC4;S525-p SIPRAPSSDEECFFD 0.366009236572898 0.0987083081343399 -0.172333333333333 -0.344 8.10233213600443 13.2932478063703 -0.172333333333333 -0.344 0.154798513670395 0.0468462918125603 -1.65290797260506 -2.56260124320529 A0A0A0MRC4 NotFound A0A0A0MRC4.S525.p_NotFound A0A0A0MRC4_S524sS525s_2_2_524_525 A0A0A0MRC4 A0A0A0MRC4|Q86YR5|A0A0A0MSK4|Q86YR5-4 G-protein-signaling modulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.34558.34558.4 13.94 13.94 1.1 5 2 2 0 733.5958 2771.4326 S524s S525s TMT10 517 (R) TSIPRAPssDEECFFDLLTK (F) T(0.0)S(0.0)IPRAPS(0.99)S(0.99)DEECFFDLLT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GPSM1 78910.1 3 6 1684.1 121.22 HUMAN 1 -8.1023 -13.2932 SIPSLPQSPMRETPS-p Q8NEZ4-3;S4324-p SIPSLPQSPMRETPS 0.98609608686731 0.524213898579004 0.003 -0.06 0.123106109827725 3.76931817892879 0.003 -0.06 0.972051755699737 0.419824889269397 0.0366846593472798 -0.872627852070119 Q8NEZ4 KMT2C Q8NEZ4.3.S4324.p_KMT2C Q8NEZ4-3_S4324s _1_1_4324_4324 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17678.17678.4 15.01 14.89 1.508 5 1 1 0 606.3163 2342.279 S4324s TMT10 4316 (K) ESIPSLPQsPMRETPSK (A) ES(0.0)IPS(0.0)LPQS(0.99)PMRET(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S KMT2C 554869.1 7 23 88.1 626.31 HUMAN 1 0.1231 -3.7693 SIPVTELSASGPFES-p Q9Y244;S20-p SIPVTELSASGPFES 0.171158122502722 0.500710313362768 -0.265666666666667 0.089 15.2788168058569 4.02098512360573 -0.265666666666667 0.089 0.029656392397692 0.396188155477395 -2.9309089190763 0.920982215132228 Q9Y244 POMP Q9Y244.S20.p_POMP Q9Y244_S20s _1_1_20_20 Q9Y244 Q9Y244 Proteasome maturation protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23610.24212.4 21.55 21.55 2.488 5 1 1 0 734.886 2856.5507 S20s TMT10 12 (K) DSIPVTELsASGPFESHDLLRK (G) DS(0.0)IPVT(0.0)ELS(0.99)AS(0.0)GPFES(0.0)HDLLRK K:TMT10,s:Phosphorylated S POMP 15845.8 5 1 2587.1 77.51 HUMAN 1 -15.2788 4.021 SIQEAPVSEDLVIRL-p Q5JTV8;S186-p SIQEAPVSEDLVIRL 0.47451765078145 0.457416754383376 0.163 -0.131666666666667 5.96310887297715 4.52853002829699 0.163 -0.131666666666667 0.253331452210636 0.352490159428897 1.27798893216402 -1.01671405441394 Q5JTV8 TOR1AIP1 Q5JTV8.S186.p_TOR1AIP1 Q5JTV8_S186s _1_1_186_186 Q5JTV8 Q5JTV8|A0A0A0MSK5 Torsin-1A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21435.21435.3 16.81 16.81 13.991 2 1 1 0 622.3261 1784.9955 S186s TMT10 179 (R) SIQEAPVsEDLVIR (L) S(0.0)IQEAPVS(0.99)EDLVIR s:Phosphorylated S TOR1AIP1 66418.4 1 9 585.1 265.22 HUMAN 1 5.9631 -4.5285 SIQESTGSIIEVLSK-p P51659;S294-p SIQESTGSIIEVLSK 0.577114205340763 0.129784448583912 -0.129 0.185 4.39281632071778 11.6873091683711 -0.129 0.185 0.363679120347639 0.0678061495493956 -0.99151072219917 2.27589067295286 P51659 HSD17B4 P51659.S294.p_HSD17B4 P51659_S294s _1_1_294_294 P51659 P51659-2|P51659-3|E7EWE5|E7ET17|G5E9S2|E7ER27 Peroxisomal multifunctional enzyme type 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27128.27128.5 22.57 21.19 1.106 6 1 1 0 801.8367 3925.1762 S294s TMT10 275 (K) KICDFENASKPQSIQESTGsIIEVLSK (I) KICDFENAS(0.0)KPQS(0.0)IQES(0.0)T(0.0)GS(0.99)IIEVLS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S HSD17B4 80141.3 8 3 1401.1 146.42 HUMAN 1 -4.3928 11.6873 SIQLQPQSPSASKKH-p Q08174-2;S984-p SIQLQPQSPSASKKH 0.375226204548174 0.115747127817729 0.119333333333333 0.203 7.87993893839413 12.3527246453654 0.119333333333333 0.203 0.16293189406286 0.0581738136589742 1.61432611052089 2.39382297030806 Q08174 PCDH1 Q08174.2.S984.p_PCDH1 Q08174-2_S984s _1_1_984_984 Q08174-2 Q08174-2 Isoform 2 of Protocadherin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22357.22357.2 20.28 20.28 2 6 1 1 0 1252.6609 2424.3499 S984s TMT10 971 (R) SNSPLPSIQLQPQsPSASK (K) S(0.0)NS(0.0)PLPS(0.0)IQLQPQS(0.99)PS(0.0)AS(0.0)K K:TMT10,s:Phosphorylated S PCDH1 134290.1 7 5 666.1 249.91 HUMAN 1 7.8799 12.3527 SIRPALNSPVERPSS-p Q9UKV5;S516-p SIRPALNSPVERPSS 0.937961135762645 0.164248827005797 0.015 -0.202 0.542084793977218 10.3147103592912 0.015 -0.202 0.882656087103537 0.0930098543038776 0.154711014515053 -2.03559083868735 Q9UKV5 AMFR Q9UKV5.S516.p_AMFR Q9UKV5_S516s _1_1_516_516 Q9UKV5 Q9UKV5 E3 ubiquitin-protein ligase AMFR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16482.16482.5 11.86 5.97 1.79 9 1 1 0 892.6379 4379.1912 S516s TMT10 507 (R) SDSIRPALNsPVERPSSDQEEGETSAQTERVPLDLSPR (L) S(0.0)DS(0.0)IRPALNS(0.99)PVERPS(0.0)S(0.0)DQEEGET(0.0)S(0.0)AQT(0.0)ERVPLDLS(0.0)PR s:Phosphorylated S AMFR 73793.2 1 3 1976.1 104.62 HUMAN 1 0.5421 -10.3147 SIRSSQWSFSTISSS-p Q9H6X4;S93-p SIRSSQWSFSTISSS 0.502618439159992 0.710190844557123 0.103666666666667 0.042 5.51119917068298 2.04399475094731 0.103666666666667 0.042 0.281112451762211 0.624597907446239 1.196968099758 0.518462412723268 Q9H6X4 TMEM134 Q9H6X4.S93.p_TMEM134 Q9H6X4_S93s _1_1_93_93 Q9H6X4 Q9H6X4|Q9H6X4-3|Q9H6X4-2 Transmembrane protein 134 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20000.20000.2 12.91 9.43 2.306 9 1 1 0 999.4654 1917.9504 S93s TMT10 89 (R) SSQWsFSTISSSTQR (S) S(0.0)S(0.0)QWS(0.99)FS(0.0)T(0.0)IS(0.0)S(0.0)S(0.0)T(0.0)QR s:Phosphorylated S TMEM134 21757.1 2 2 4872.1 25.6 HUMAN 1 5.5112 2.044 SIRTFKESPKQILDP-p P46013;S1071-p SIRTFKESPKQILDP 0.486043064859747 0.00172005316210418 0.121333333333333 -0.906333333333333 5.77392430830356 43.8123130850998 0.121333333333333 -0.906333333333334 0.264610802056063 4.15689152352703e-05 1.24418341070725 -11.9865400038664 P46013 MKI67 P46013.S1071.p_MKI67 P46013_S1071s _1_1_1071_1071 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18296.18296.4 10.48 3.62 2.385 2 1 1 0 617.8529 2388.4218 S1071s TMT10 1067 (R) TFKEsPKQILDPAAR (V) T(0.0)FKES(0.99)PKQILDPAAR K:TMT10,s:Phosphorylated S MKI67 360912.4 7 24 5.1 1918.46 HUMAN 1 5.7739 -43.8123 SISASKASPPGDLQN-p O00273;S315-p SISASKASPPGDLQN 0.650567073565383 0.84629558466175 0.0663333333333333 -0.0256666666666667 3.50210593427099 1.01912146706953 0.0663333333333334 -0.0256666666666667 0.446467043636697 0.790838590307608 0.820674132917843 -0.278640476454348 O00273 DFFA O00273.S315.p_DFFA O00273_S315s _1_1_315_315 O00273 O00273 DNA fragmentation factor subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13719.13719.3 16.97 10.71 2.845 4 1 1 0 822.1188 2384.3752 S315s TMT10 308 (R) SISASKAsPPGDLQNPK (R) S(0.0)IS(0.0)AS(0.0)KAS(0.99)PPGDLQNPK K:TMT10,s:Phosphorylated S DFFA 36920.6 9 7 1497.1 136.46 HUMAN 1 3.5021 -1.0191 SISCLELSNNLEKKP-p Q9Y6M5;S473-p SISCLELSNNLEKKP 0.936804537148267 0.0503279155104688 0.0136666666666667 -0.277666666666667 0.551670275509691 17.3508612792205 0.0136666666666667 -0.277666666666667 0.880710091036567 0.0184040698152436 0.157301637485618 -3.32945987011981 Q9Y6M5 SLC30A1 Q9Y6M5.S473.p_SLC30A1 Q9Y6M5_S473s_1_1_473_473 Q9Y6M5 Q9Y6M5 Zinc transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26529.26529.3 12.04 12.04 1.213 4 1 1 0 805.4216 2333.2787 S473s N474n TMT10 462 (K) TPAVSISCLELsnNLEK (K) T(0.0)PAVS(0.0)IS(0.0)CLELS(0.99)N(0.99)N(0.0)LEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated SLC30A1 56325.8 1 3 2465.1 82.17 HUMAN 1 0.5517 -17.3509 SISDPPESPPLLPPR-p Q07889;S1210-p SISDPPESPPLLPPR 0.341244205876587 0.124347286638145 -0.14 -0.203666666666667 8.68016360184672 11.943269429557 -0.14 -0.203666666666667 0.135513836235529 0.0639253415390157 -1.75299851010839 -2.32112449728683 Q07889 SOS1 Q07889.S1210.p_SOS1 Q07889_S1210s _1_1_1210_1210 Q07889 Q07889|G5E9C8 Son of sevenless homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18625.18625.3 14.52 13.75 2.996 4 1 1 0 831.7709 2413.3288 S1210s TMT10 1202 (R) TSISDPPEsPPLLPPREPVR (T) T(0.0)S(0.0)IS(0.0)DPPES(0.99)PPLLPPREPVR s:Phosphorylated S SOS1 153431.2 1 6 2313.1 88.35 HUMAN 1 -8.6802 -11.9433 SISEEADSEPGRSGG-p Q9NSI6-2;S1793-p SISEEADSEPGRSGG 0.725540797054666 0.425781745842734 0.0836666666666667 0.143333333333333 2.6415643881874 4.9348634701949 0.0836666666666667 0.143333333333333 0.54430655085297 0.321006371787714 0.646619861571925 1.09188960757669 Q9NSI6 BRWD1 Q9NSI6.2.S1793.p_BRWD1 Q9NSI6-2_S1793s _1_1_1793_1793 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11790.11790.3 19.58 19.58 7.388 3 1 1 0 752.7106 2176.1498 S1793s TMT10 1782 (K) LKAESISEEADsEPGR (S) LKAES(0.0)IS(0.0)EEADS(0.99)EPGR K:TMT10,s:Phosphorylated S BRWD1 259915.1 3 17 208.1 444.81 HUMAN 1 2.6416 4.9349 SISITTESLKSLIPD-p Q9UKV3;S870-p SISITTESLKSLIPD 0.642148346575429 0.125032389011678 0.0686666666666667 0.324666666666667 3.59512059026395 11.9088729510784 0.0686666666666667 0.324666666666667 0.437006544570084 0.0644336457252321 0.838899588152688 2.31503676854959 Q9UKV3 ACIN1 Q9UKV3.S870.p_ACIN1 Q9UKV3_S870s _1_1_870_870 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4|Q9UKV3-2 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18387.18387.3 14.17 14.17 1.106 5 1 1 0 691.073 1991.2356 S870s TMT10 861 (K) KPSISITTEsLK (S) KPS(0.0)IS(0.0)IT(0.0)T(0.0)ES(0.99)LK K:TMT10,s:Phosphorylated S ACIN1 152258.2 1 33 32.2 899.18 HUMAN 1 3.5951 11.9089 SITKRAHTPTPGIYM-p Q13595;T202-p SITKRAHTPTPGIYM 0.266306780221325 0.0575735191135027 0.158 0.229666666666667 10.88886746958 16.5151659476255 0.158 0.229666666666667 0.0814916766043828 0.0223091696061352 2.13665100256539 3.16541670017178 Q13595 TRA2A Q13595.T202.p_TRA2A Q13595_T202t _1_1_202_202 Q13595 Q13595|Q13595-3|Q13595-4 Transformer-2 protein homolog alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4644.4644.4 27.3 27.3 1.15 5 1 1 0 718.5681 2791.2826 T202t Hydrogen 200 (R) AHtPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR (R) AHT(0.99)PT(0.0)PGIY(0.0)MGRPT(0.0)HS(0.0)GGGGGGGGGGGGGGGGR t:Phosphorylated T TRA2A 32745.1 111 116 8.2 1346.57 HUMAN 1 10.8889 16.5152 SITKRPHTPTPGIYM-p P62995;T201-p SITKRPHTPTPGIYM 0.494855442199795 0.258449517528879 0.0903333333333333 0.110333333333333 5.62711575664746 7.74192232080082 0.0903333333333333 0.110333333333333 0.273708588061967 0.168192942264802 1.2178404910165 1.58986965219014 P62995 TRA2B P62995.T201.p_TRA2B P62995_T201t _1_1_201_201 P62995 P62995|P62995-3 Transformer-2 protein homolog beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14169.14169.5 19.21 19.21 1.475 9 1 1 0 666.9397 3250.6993 T201t Hydrogen 191 (R) VDFSITKRPHtPTPGIYMGRPTYGSSR (R) VDFS(0.0)IT(0.0)KRPHT(0.99)PT(0.0)PGIY(0.0)MGRPT(0.0)Y(0.0)GS(0.0)S(0.0)R K:TMT10-Lys-Only,t:Phosphorylated T TRA2B 33779.2 112 104 8.3 1346.57 HUMAN 1 5.6271 7.7419 SITPAVKSPLPGPSE-p Q13112;S458-p SITPAVKSPLPGPSE 0.63402157136799 0.000993050805672115 -0.0806666666666667 -1.32033333333333 3.68474409512316 52.8431186112602 -0.0806666666666667 -1.32033333333333 0.428080643184795 5.19622728318353e-06 -0.856367135459955 -17.7420527240438 Q13112 CHAF1B Q13112.S458.p_CHAF1B Q13112_S458s _1_1_458_458 Q13112 Q13112 Chromatin assembly factor 1 subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20479.20479.5 24.1 20.04 3.819 5 1 1 0 750.222 3667.1038 S458s TMT10 439 (R) QAPAPTVIRDPPSITPAVKsPLPGPSEEK (T) QAPAPT(0.0)VIRDPPS(0.0)IT(0.0)PAVKS(0.99)PLPGPS(0.0)EEK K:TMT10,s:Phosphorylated S CHAF1B 61947.8 3 5 1182.1 168.89 HUMAN 1 -3.6847 -52.8431 SITPSKSSPVPVSDT-p Q76FK4;S268-p SITPSKSSPVPVSDT 0.155306054967913 0.0107326901308278 -0.284666666666667 -0.399333333333333 16.2485183389589 27.607478853839 -0.284666666666667 -0.399333333333333 0.0237218287354248 0.00173481078980129 -3.11605499305374 -5.72781513755724 Q76FK4 NOL8 Q76FK4.S268.p_NOL8 Q76FK4_S268s _1_1_268_268 Q76FK4 Q76FK4|Q76FK4-4 Nucleolar protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10307.10307.2 13.47 13.47 1.441 4 1 1 0 841.9427 1602.9103 S268s TMT10 267 (K) SsPVPVSDTQK (L) S(0.0)S(0.99)PVPVS(0.0)DT(0.0)QK K:TMT10,s:Phosphorylated S NOL8 132527 7 1 605.1 262.45 HUMAN 1 -16.2485 -27.6075 SITPVLGSPSTKRRG-p Q9NYF5;S760-p SITPVLGSPSTKRRG 0.177928026787036 0.249232583186775 -0.23 -0.121666666666667 14.850968875282 7.94977575675378 -0.23 -0.121666666666667 0.0327267676006423 0.160332817466444 -2.850546714836 -1.62593485822108 Q9NYF5 FAM13B Q9NYF5.S760.p_FAM13B Q9NYF5_S760s _1_1_760_760 Q9NYF5 Q9NYF5|Q9NYF5-2|Q9NYF5-3 Protein FAM13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19745.19745.2 14.3 14.3 2 5 1 1 0 898.5031 1716.0308 S760s TMT10 752 (R) ASITPVLGsPSTK (R) AS(0.0)IT(0.0)PVLGS(0.99)PS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S FAM13B 105225.4 2 2 5301.1 20.8 HUMAN 1 -14.851 -7.9498 SITSPPLSPALPKYK-p Q6Y7W6-5;S30-p SITSPPLSPALPKYK 0.149214344489706 0.00112568182952083 -0.449 -1.11866666666667 16.6502586549546 49.0700411843542 -0.449 -1.11866666666667 0.0216258972144493 1.23878483901857e-05 -3.19406408560733 -15.0727782627748 Q6Y7W6 GIGYF2 Q6Y7W6.5.S30.p_GIGYF2 Q6Y7W6-5_S30s _1_1_30_30 Q6Y7W6-5 I1E4Y6|Q6Y7W6-3|Q6Y7W6-5|Q6Y7W6-4|F8WCD5 Isoform 4 of GRB10-interacting GYF protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24490.24490.3 17.68 15.6 2.854 6 1 1 0 773.4315 2238.311 S30s TMT10 17 (R) ALSSGGSITSPPLsPALPK (Y) ALS(0.0)S(0.0)GGS(0.0)IT(0.0)S(0.0)PPLS(0.99)PALPK K:TMT10,s:Phosphorylated S GIGYF2 149826.1 1 4 470.1 302.35 HUMAN 1 -16.6503 -49.07 SITSTPLSGKESVFF-p Q9P0K7;S300-p SITSTPLSGKESVFF 0.0520154613962689 0.00320981770772267 -1.18933333333333 -0.769666666666667 27.9364762652012 37.3469106262879 -1.18933333333333 -0.769666666666667 0.0016082456058967 0.000184208190892237 -5.82804587807524 -8.99972927954213 Q9P0K7 RAI14 Q9P0K7.S300.p_RAI14 Q9P0K7_S300s _1_1_300_300 Q9P0K7 Q9P0K7-2|Q9P0K7-3|Q9P0K7-4 Ankycorbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15728.15728.2 12.29 12.29 1.862 5 1 1 0 764.9239 1448.8725 S300s TMT10 293 (R) SITSTPLsGK (E) S(0.0)IT(0.0)S(0.0)T(0.0)PLS(0.99)GK K:TMT10,s:Phosphorylated S RAI14 110666.9 2 9 498.1 292.24 HUMAN 1 -27.9365 -37.3469 SIVKRPRSAELSEDD-p Q9UQ84;S422-p SIVKRPRSAELSEDD 0.0675927151943729 0.00120235374474026 -0.431333333333333 -1.07266666666667 25.2394839499391 48.0607125290904 -0.431333333333334 -1.07266666666667 0.00299262021333276 1.56289120447467e-05 -5.10468753431989 -14.4270486883743 Q9UQ84 EXO1 Q9UQ84.S422.p_EXO1 Q9UQ84_S422s _1_1_422_422 Q9UQ84 Q9UQ84|Q9UQ84-4 Exonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30872.30872.3 15.28 15.28 3.908 7 1 1 0 814.7245 2362.1863 S422s Hydrogen 422 (R) sAELSEDDLLSQYSLSFTK (K) S(0.99)AELS(0.0)EDDLLS(0.0)QY(0.0)S(0.0)LS(0.0)FT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S EXO1 95242.6 2 2 1477.1 139.01 HUMAN 1 -25.2395 -48.0607 SIWHRNYSPRPESGT-p Q9UQ84;S376-p SIWHRNYSPRPESGT 0.473186311260259 0.00105578872948118 -0.105333333333333 -1.59066666666667 5.98615636996908 50.8129317617175 -0.105333333333333 -1.59066666666667 0.251990612995539 8.29290754940304e-06 -1.28209704949478 -16.2537010516394 Q9UQ84 EXO1 Q9UQ84.S376.p_EXO1 Q9UQ84_S376s _1_1_376_376 Q9UQ84 Q9UQ84|Q9UQ84-4 Exonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13102.13102.3 18.96 14.62 3.117 5 1 1 0 828.7557 2404.2873 S376s TMT10 374 (R) NYsPRPESGTVSDAPQLK (E) NY(0.0)S(0.99)PRPES(0.0)GT(0.0)VS(0.0)DAPQLK K:TMT10,s:Phosphorylated S EXO1 95242.6 1 1 1477.1 139.01 HUMAN 1 -5.9862 -50.8129 SIYPGYMSPHAGYPA-p Q9Y4B4;S1421-p SIYPGYMSPHAGYPA 0.284595187898323 0.171264081098051 0.294333333333333 0.233 10.2987083625563 10.0759963309667 0.294333333333333 0.233 0.0933531901715412 0.0982653413000468 2.03365745920166 1.99410346046289 Q9Y4B4 RAD54L2 Q9Y4B4.S1421.p_RAD54L2 Q9Y4B4_S1421s _1_1_1421_1421 Q9Y4B4 Q9Y4B4 Helicase ARIP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25038.25038.3 15.7 15.7 2.82 5 1 1 0 868.7512 2524.2678 S1421s TMT10 1412 (R) GMSIYPGYMsPHAGYPAGGLLR (S) GMS(0.0)IY(0.0)PGY(0.0)MS(0.99)PHAGY(0.0)PAGGLLR s:Phosphorylated S RAD54L2 164135.1 1 6 1338.1 152.26 HUMAN 1 10.2987 10.076 SKAAGGNSREPSPLP-p Q13207;S653-p SKAAGGNSREPSPLP 0.540568630290251 0.0965194882869486 0.120666666666667 0.211 4.93089234229623 13.4269648258311 0.120666666666667 0.211 0.321300029754742 0.0454258975836324 1.09137840755155 2.58682049895741 Q13207 TBX2 Q13207.S653.p_TBX2 Q13207_S653sS657s_2_2_653_657 Q13207 Q13207 T-box transcription factor TBX2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19297.19297.5 9.36 8.16 99 2 2 2 0 517.0716 2421.3978 S653s S657s TMT10 648 (K) AAGGNsREPsPLPELALRK (V) AAGGNS(1.0)REPS(1.0)PLPELALRK K:TMT10,s:Phosphorylated S TBX2 75292.9 1 7 2245.1 91.76 HUMAN 1 4.9309 13.427 SKAAQAPSPWGASGK-p P51826-2;S1130-p SKAAQAPSPWGASGK 0.803215176917681 0.2098444109855 0.0416666666666667 0.189333333333333 1.83276652767709 8.92082652086341 0.0416666666666667 0.189333333333333 0.655727424016727 0.128208656110455 0.471440010982927 1.79401834483619 P51826 AFF3 P51826.2.S1130.p_AFF3 P51826-2_S1130s _1_1_1130_1130 P51826-2 P51826-2 Isoform 2 of AF4/FMR2 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14949.14949.3 12.34 12.34 4.153 2 1 1 0 589.3061 1685.9375 S1130s TMT10 1125 (K) AAQAPsPWGASGK (S) AAQAPS(0.99)PWGAS(0.0)GK K:TMT10,s:Phosphorylated S AFF3 137490.8 2 6 632.2 256.73 HUMAN 1 1.8328 8.9208 SKAARRPSHPKQPRV-p Q8TBE0;S568-p SKAARRPSHPKQPRV 0.16260279192036 0.0132282127607495 -0.291333333333333 -0.409666666666667 15.7971231575879 26.1447277741264 -0.291333333333333 -0.409666666666667 0.0263201090450316 0.00242955772757184 -3.02933200235433 -5.33261051099304 Q8TBE0 BAHD1 Q8TBE0.S568.p_BAHD1 Q8TBE0_S568s _1_1_568_568 Q8TBE0 Q8TBE0|Q8TBE0-2|Q8TBE0-3 Bromo adjacent homology domain-containing 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.2770.2770.4 8.03 8.03 99 1 1 1 0 410.9843 1560.9487 S568s TMT10 566 (R) RPsHPKQPR (V) RPS(1.0)HPKQPR K:TMT10,s:Phosphorylated S BAHD1 85848.7 1 7 636.1 256.1 HUMAN 1 -15.7971 -26.1447 SKADLNCSKNKDLYQ-p Q5W0B1;S339-p SKADLNCSKNKDLYQ 0.0617660610365025 0.00123467326444358 -0.524333333333333 -1.86433333333333 26.3553915221106 47.7768643656517 -0.524333333333333 -1.86433333333333 0.00231451951967172 1.66845141052729e-05 -5.39545142392963 -14.2502777255949 Q5W0B1 RNF219 Q5W0B1.S339.p_RNF219 Q5W0B1_S339s _1_1_339_339 Q5W0B1 Q5W0B1 RING finger protein 219 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7942.7942.3 10.95 10.95 8.442 4 1 1 0 745.7148 2155.1632 S339s TMT10 328 (R) QESTSKADLNCsK (N) QES(0.0)T(0.0)S(0.0)KADLNCS(0.99)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RNF219 82427.3 1 2 1133.1 173.85 HUMAN 1 -26.3554 -47.7769 SKAFHRLSRRRSKDV-p O60292;S142-p SKAFHRLSRRRSKDV 0.610139807926776 0.995091444663301 -0.112666666666667 0.00100000000000003 3.97567074106272 0.0296919757238717 -0.112666666666667 0.00100000000000005 0.40034363294874 0.993186487883805 -0.912476195459027 0.00894031562532834 O60292 SIPA1L3 O60292.S142.p_SIPA1L3 O60292_S142s _1_1_142_142 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.4242.4242.3 8.14 8.14 99 1 1 1 0 399.2142 1115.6635 S142s TMT10 137 (K) AFHRLsR (R) AFHRLS(1.0)R s:Phosphorylated S SIPA1L3 195918.6 1 3 144.1 520.25 HUMAN 1 -3.9757 0.0297 SKAGTAPSPRVDAGL-p A6NEL2;S540-p SKAGTAPSPRVDAGL 0.926849009761647 0.445299931314962 0.0303333333333333 0.193333333333333 0.651451116224069 4.67879357232738 0.0303333333333333 0.193333333333333 0.860706114799046 0.340502764908283 0.184008201677351 1.0446524912756 A6NEL2 SOWAHB A6NEL2.S540.p_SOWAHB A6NEL2_S540s _1_1_540_540 A6NEL2 A6NEL2 Ankyrin repeat domain-containing protein SOWAHB HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16913.16913.3 13.85 9.82 2.312 3 1 1 0 693.3865 1998.1748 S540s TMT10 535 (K) AGTAPsPRVDAGLSLK (L) AGT(0.0)APS(0.99)PRVDAGLS(0.0)LK K:TMT10,s:Phosphorylated S SOWAHB 86311.4 1 8 711.1 238.55 HUMAN 1 0.6515 4.6788 SKALRPPTSPGVFGA-p O75151;T654-p SKALRPPTSPGVFGA 0.0884809517257935 0.232258513697766 -0.797666666666667 0.202666666666667 22.4360843177547 8.3518354150878 -0.797666666666667 0.202666666666667 0.00570678575128911 0.146155935978356 -4.42236944333855 1.69558380216781 O75151 PHF2 O75151.T654.p_PHF2 O75151_T654t _1_1_654_654 O75151 O75151 Lysine-specific demethylase PHF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29059.29059.4 13.19 13.19 1.169 2 1 1 0 610.3392 2358.3698 T654t TMT10 649 (K) ALRPPtSPGVFGALQNFK (E) ALRPPT(0.99)S(0.0)PGVFGALQNFK K:TMT10,t:Phosphorylated T PHF2 121742.7 4 5 376.2 336.84 HUMAN 1 -22.4361 8.3518 SKANNLSSLSKKYRQ-p O75396;S175-p SKANNLSSLSKKYRQ 0.217577899275613 0.0313647905340148 -0.339666666666667 -0.296666666666667 12.7601926993499 20.3114286946833 -0.339666666666667 -0.296666666666667 0.0529639942893782 0.00930801620117606 -2.46794339295408 -3.94234481578538 O75396 SEC22B O75396.S175.p_SEC22B O75396_S175s _1_1_175_175 O75396 O75396 Vesicle-trafficking protein SEC22b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13313.13313.3 11.41 8.53 1.306 3 1 1 0 491.2694 1391.8259 S175s TMT10 170 (K) ANNLSsLSK (K) ANNLS(0.0)S(0.99)LS(0.0)K K:TMT10,s:Phosphorylated S SEC22B 24821.1 2 4 3041.1 62.34 HUMAN 1 -12.7602 -20.3114 SKAPGMNSLEQGMVG-p Q9BYJ9;S182-p SKAPGMNSLEQGMVG 0.551113986742318 0.860140272835132 -0.121666666666667 0.0186666666666667 4.77492144822415 0.921925127458223 -0.121666666666667 0.0186666666666667 0.333048786179206 0.808737325072377 -1.06264510305705 0.254153076785917 Q9BYJ9 YTHDF1 Q9BYJ9.S182.p_YTHDF1 Q9BYJ9_S182s _1_1_182_182 Q9BYJ9 Q9BYJ9 YTH domain-containing family protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.26078.26078.3 14.67 14.67 99 1 1 1 0 690.6888 1990.0866 S182s TMT10 177 (K) APGMNsLEQGMVGLK (I) APGMNS(1.0)LEQGMVGLK K:TMT10,s:Phosphorylated S YTHDF1 61043.7 2 9 1868.2 109.97 HUMAN 1 -4.7749 0.9219 SKAQRGNSVEELEEM-p Q96JH7;S1198-p SKAQRGNSVEELEEM 0.254904931587033 0.0323164429347562 0.173 0.317 11.2948283800896 20.1139366019976 0.173 0.317 0.0742193526379955 0.00974106272322772 2.20784360420212 3.8997694233841 Q96JH7 VCPIP1 Q96JH7.S1198.p_VCPIP1 Q96JH7_S1198s _1_1_1198_1198 Q96JH7 Q96JH7 Deubiquitinating protein VCIP135 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20662.20662.3 27.34 27.34 10.842 6 1 1 0 1112.4464 3255.3449 S1198s TMT10 1196 (R) GNsVEELEEMDSQDAEMTNTTEPMDHS (-) GNS(0.99)VEELEEMDS(0.0)QDAEMT(0.0)NT(0.0)T(0.0)EPMDHS(0.0) s:Phosphorylated S VCPIP1 135687.4 27 10 725.1 236.71 HUMAN 1 11.2948 20.1139 SKARRIVSDGEDEDD-p Q2NKX8;S1028-p SKARRIVSDGEDEDD 0.638088289295175 0.0353033330217512 -0.0656666666666667 -0.277333333333333 3.64041380490332 19.5480050323376 -0.0656666666666667 -0.277333333333333 0.432472622172096 0.0110968444093923 -0.847738442351734 -3.77917706715657 Q2NKX8 ERCC6L Q2NKX8.S1028.p_ERCC6L Q2NKX8_S1028s _1_1_1028_1028 Q2NKX8 Q2NKX8|B5MDQ0 DNA excision repair protein ERCC-6-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.35195.35389.4 19.98 17.18 2.164 9 1 1 0 1081.5256 4243.1174 S1028s TMT10 1026 (R) IVsDGEDEDDSFKDTSSINPFNTSLFQFSSVK (Q) IVS(0.99)DGEDEDDS(0.0)FKDT(0.0)S(0.0)S(0.0)INPFNT(0.0)S(0.0)LFQFS(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S ERCC6L 142070.4 17 10 422.1 320.12 HUMAN 1 -3.6404 -19.548 SKASEAASPLPDSPG-p Q68CZ2;S1149-p SKASEAASPLPDSPG 0.858927631567306 0.049088445318004 0.048 -0.296333333333333 1.28831079925121 17.507366432062 0.048 -0.296333333333333 0.743308193516119 0.0177526567819491 0.344712564879233 -3.36058602594064 Q68CZ2 TNS3 Q68CZ2.S1149.p_TNS3 Q68CZ2_S1149s _1_1_1149_1149 Q68CZ2 Q68CZ2|Q68CZ2-2 Tensin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12525.12525.3 15.51 15.51 3.702 3 1 1 0 660.6619 1900.0064 S1149s TMT10 1144 (K) ASEAAsPLPDSPGDK (L) AS(0.0)EAAS(0.99)PLPDS(0.0)PGDK K:TMT10,s:Phosphorylated S TNS3 156460.9 2 19 183.1 477.16 HUMAN 1 1.2883 -17.5074 SKASIGQSPGLPSTT-p Q5VT52;S614-p SKASIGQSPGLPSTT 0.879970339303398 0.246900105530861 -0.0306666666666667 0.221 1.09106032356129 8.00448178288451 -0.0306666666666667 0.221 0.777846617752251 0.158325847601239 -0.296566523175709 1.63541940506318 Q5VT52 RPRD2 Q5VT52.S614.p_RPRD2 Q5VT52_S614s _1_1_614_614 Q5VT52 Q5VT52|Q5VT52-3|Q5VT52-2|Q5VT52-5 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20992.20992.2 17.33 17.33 3.524 5 1 1 0 1015.0416 1949.1108 S614s TMT10 609 (K) ASIGQsPGLPSTTFK (L) AS(0.0)IGQS(0.99)PGLPS(0.0)T(0.0)T(0.0)FK K:TMT10,s:Phosphorylated S RPRD2 156473.2 3 12 172.1 488.65 HUMAN 1 -1.0911 8.0045 SKASKEKTPSPKEED-p Q9H1E3;T202-p SKASKEKTPSPKEED 0.672358497278125 0.00471188329012025 -0.0813333333333334 0.616166666666667 3.22850298882307 34.0305064488448 -0.0813333333333334 0.616166666666667 0.475499102029378 0.000395320517411562 -0.766453708263691 7.7440395237806 Q9H1E3 NUCKS1 Q9H1E3.T202.p_NUCKS1 Q9H1E3_T202tS204s_2_2_202_204 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10936.10936.3 10.62 10.62 4.076 3 2 2 0 1086.8668 3098.6551 T202t S204s TMT10 200 (K) EKtPsPKEEDEEPESPPEK (K) EKT(0.99)PS(0.99)PKEEDEEPES(0.0)PPEK K:TMT10,t:Phosphorylated T,s:Phosphorylated S NUCKS1 27295.9 23 25 48.1 767.83 HUMAN 2 -3.2285 34.0305 SKATEPPSPDAGELS-p Q8IYB8;S725-p SKATEPPSPDAGELS 0.24274860516399 0.0728743838384277 0.175666666666667 0.243333333333333 11.7622086098815 15.1092526409858 0.175666666666667 0.243333333333333 0.0666467750029962 0.0308371856868423 2.29022669533541 2.89705945701912 Q8IYB8 SUPV3L1 Q8IYB8.S725.p_SUPV3L1 Q8IYB8_S725s _1_1_725_725 Q8IYB8 Q8IYB8 ATP-dependent RNA helicase SUPV3L1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16605.16605.2 16.15 11.52 4.975 4 1 1 0 1003.9871 1926.997 S725s TMT10 720 (K) ATEPPsPDAGELSLASR (L) AT(0.0)EPPS(0.99)PDAGELS(0.0)LAS(0.0)R s:Phosphorylated S SUPV3L1 88845.5 2 1 5803.1 16.15 HUMAN 1 11.7622 15.1093 SKAVCSTYLQSRYYR-p Q86Z02;Y352-p SKAVCSTYLQSRYYR 0.998180995519267 0.0498857862049089 0.000333333333333329 0.276666666666667 0.0123779070992258 17.4089974975819 0.000333333333333338 0.276666666666667 0.997153939294717 0.0181593479518223 0.0037347361453792 3.3410068423067 Q86Z02 HIPK1 Q86Z02.Y352.p_HIPK1 Q86Z02_Y352y _1_1_352_352 Q86Z02 Q86Z02|Q9H2X6|J3KP92 Homeodomain-interacting protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8705.8705.3 11.78 11.78 2.781 4 1 1 0 498.5716 1413.7358 Y352y TMT10 347 (K) AVCSTyLQSR (Y) AVCS(0.0)T(0.0)Y(0.99)LQS(0.0)R C:Carbamidomethylation,y:Phosphorylated Y HIPK1 131924.3 2 2 3723.1 44.49 HUMAN 1 0.0124 17.409 SKAVEESSDEERQRD-p Q9BW71;S143-p SKAVEESSDEERQRD 0.339146804580708 0.489843879097225 0.180333333333333 0.0656666666666667 8.73502234815382 4.14371890256822 0.180333333333333 0.0656666666666667 0.133812832932518 0.385148410382174 1.7624949253955 0.944339620919625 Q9BW71 HIRIP3 Q9BW71.S143.p_HIRIP3 Q9BW71_S142sS143s_2_2_142_143 Q9BW71 Q9BW71 HIRA-interacting protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4240.4240.3 11.53 11.53 99 2 2 2 0 608.5853 1663.8085 S142s S143s TMT10 138 (K) AVEEssDEERQR (D) AVEES(1.0)S(1.0)DEERQR s:Phosphorylated S HIRIP3 62298.3 6 20 178.1 481.23 HUMAN 1 8.735 4.1437 SKAVGMPSPVSPKLS-p Q9UHB7;S1055-p SKAVGMPSPVSPKLS 0.704484897054693 0.335743382074166 0.052 -0.111666666666667 2.86050506407 6.28148779327509 0.052 -0.111666666666667 0.517546640208913 0.235424263620964 0.691934036886251 -1.33422581543568 Q9UHB7 AFF4 Q9UHB7.S1055.p_AFF4 Q9UHB7_S1055s_1_1_1055_1055 Q9UHB7 Q9UHB7 AF4/FMR2 family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11431.11431.3 8.83 8.83 2.843 2 1 1 0 541.9591 1527.8969 M1053m S1055s TMT10 1050 (K) AVGmPsPVSPK (L) AVGM(1.0)PS(0.99)PVS(0.0)PK K:TMT10,m:Oxidized methionine,s:Phosphorylated S AFF4 127856.3 4 22 137.1 525.98 HUMAN 1 2.8605 -6.2815 SKCGKPYSPRSNIV_-p Q9BWM5;S588-p SKCGKPYSPRSNIV_ 0.516678776654512 0.179528858064841 -0.0956666666666667 0.186333333333333 5.29519348495789 9.80907905048525 -0.0956666666666667 0.186333333333333 0.295447725898232 0.104494178238581 -1.15788918907845 1.94778847975963 Q9BWM5 ZNF416 Q9BWM5.S588.p_ZNF416 Q9BWM5_S588s _1_1_588_588 Q9BWM5 Q9BWM5 Zinc finger protein 416 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5853.5853.3 7.83 3.95 5.452 2 1 1 0 501.5911 1422.7928 S588s TMT10 583 (K) CGKPYsPR (S) CGKPY(0.0)S(0.99)PR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF416 69469.2 1 1 7081.1 7.83 HUMAN 1 -5.2952 9.8091 SKDAKVPSPPPGHKW-p P11387;S394-p SKDAKVPSPPPGHKW 0.35954248405996 0.0727841803049565 0.125333333333333 0.210333333333333 8.25437047400961 15.1193324961842 0.125333333333333 0.210333333333333 0.149473069343249 0.0307656964233819 1.67926069132053 2.89895201423569 P11387 TOP1 P11387.S394.p_TOP1 P11387_S394s _1_1_394_394 P11387 P11387 DNA topoisomerase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8766.8995.3 15.36 15.36 99 1 1 1 0 666.3791 1917.1525 S394s TMT10 389 (K) DAKVPsPPPGHK (W) DAKVPS(1.0)PPPGHK K:TMT10,s:Phosphorylated S TOP1 91180.5 9 6 1682.1 121.32 HUMAN 1 8.2544 15.1193 SKDDKHGSYEDAVHS-p P17987;S544-p SKDDKHGSYEDAVHS 0.621295713198345 0.0114875367347324 -0.0793333333333334 0.398 3.8425962242551 27.1434246962904 -0.0793333333333333 0.398 0.412800654857475 0.00193044543405259 -0.886919597730891 5.60015521766306 P17987 TCP1 P17987.S544.p_TCP1 P17987_S544s _1_1_544_544 P17987 P17987|E7EQR6|F5H282 T-complex protein 1 subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9568.9568.5 24.19 23.12 3.707 4 1 1 0 678.5352 3308.6751 S544s TMT10 533 (K) LHPESKDDKHGsYEDAVHSGALND (-) LHPES(0.0)KDDKHGS(0.99)Y(0.0)EDAVHS(0.0)GALND K:TMT10,s:Phosphorylated S TCP1 60856 5 6 1979.1 104.48 HUMAN 1 -3.8426 27.1434 SKDKEKDSEKEKDLK-p Q5VZU9;S1024-p SKDKEKDSEKEKDLK 0.123250585962086 0.034251662249006 0.347 -0.286666666666667 18.9362719509594 19.741893424756 0.347 -0.286666666666667 0.0127753499347352 0.0106123278306983 3.65429011172143 -3.82025954171836 Q5VZU9 TPP2 Q5VZU9.S1024.p_TPP2 Q5VZU9_S1024s _1_1_1024_1024 Q5VZU9 Q5VZU9|P29144 Tripeptidyl-peptidase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.4568.4568.5 7.12 4.24 2.378 2 1 1 0 567.7007 2754.5129 S1024s Hydrogen 1023 (K) DsEKEKDLKEEFTEALR (D) DS(0.99)EKEKDLKEEFT(0.0)EALR K:TMT10-Lys-Only,s:Phosphorylated S TPP2 141246.4 1 1 6249.1 12.85 HUMAN 1 18.9363 -19.7419 SKDKRRDSAPYGEYG-p Q9H0B6;S428-p SKDKRRDSAPYGEYG 0.0975054875421888 0.781985415408876 -0.531333333333333 0.08 21.4135248513254 1.47847591987598 -0.531333333333333 0.0800000000000001 0.00722183422100053 0.711463145330332 -4.18909039634753 0.389896257389509 Q9H0B6 KLC2 Q9H0B6.S428.p_KLC2 Q9H0B6_S428s _1_1_428_428 Q9H0B6 Q9H0B6|Q9H0B6-2|A8MZ87 Kinesin light chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13673.13673.4 11.5 11.5 2.033 5 1 1 0 594.0411 2293.1766 S428s TMT10 425 (K) RRDsAPYGEYGSWYK (A) RRDS(0.99)APY(0.0)GEY(0.0)GS(0.0)WY(0.0)K K:TMT10,s:Phosphorylated S KLC2 69332.8 1 2 1131.1 174.01 HUMAN 1 -21.4135 1.4785 SKDQVNLSPKLIQPG-p Q5FBB7;S256-p SKDQVNLSPKLIQPG 0.588063231943662 0.00265134466421331 -0.111 -0.988 4.24607261712986 39.1825218746781 -0.111 -0.988 0.376177432784201 0.000120711268161362 -0.96388395762656 -9.76968011573971 Q5FBB7 SGOL1 Q5FBB7.S256.p_SGOL1 Q5FBB7_S256s_1_1_256_256 Q5FBB7 Q5FBB7|Q5FBB7-6 Shugoshin 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28908.28908.5 17.71 17.71 1.182 2 1 1 0 917.6704 4502.368 N244n N254n S256s TMT10 226 (R) VGFLDPLVNMHIPENVQHnACQWSKDQVnLsPK (L) VGFLDPLVN(0.0)MHIPEN(0.0)VQHN(0.99)ACQWS(0.0)KDQVN(0.99)LS(0.99)PK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S SGO1 65044.6 5 16 1140.1 173.27 HUMAN 1 -4.2461 -39.1825 SKDRGLDSGAETEEE-p E9PGC8;S850-p SKDRGLDSGAETEEE 0.222409462668413 0.0666983545483172 0.301666666666667 -0.344333333333333 12.5606484976738 15.6389037347904 0.301666666666667 -0.344333333333333 0.0554542901260456 0.0272966673031816 2.43219126500818 -2.99710029667703 E9PGC8 NotFound E9PGC8.S850.p_NotFound E9PGC8_S850s _1_1_850_850 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17094.17094.4 20.68 20.68 6.138 3 1 1 0 705.8417 2740.3768 S850s TMT10 847 (R) GLDsGAETEEEKDTWEEK (K) GLDS(0.99)GAET(0.0)EEEKDT(0.0)WEEK K:TMT10,s:Phosphorylated S MAP1A 332906.7 3 10 20.1 1016.98 HUMAN 1 12.5606 -15.6389 SKDRPHASGTDGDES-p Q96RS0;S405-p SKDRPHASGTDGDES 0.159393285726736 0.614604205436038 -0.349 -0.0583333333333333 15.9696529781306 2.87348153328167 -0.349 -0.0583333333333333 0.0252950010741545 0.516002548606543 -3.06236550488187 -0.694500554764858 Q96RS0 TGS1 Q96RS0.S405.p_TGS1 Q96RS0_S405sT407tS412s_3_3_405_412 Q96RS0 Q96RS0 Trimethylguanosine synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6750.6750.5 12.36 11.28 12.361 4 3 3 0 709.7112 3304.6285 S405s T407t S412s TMT10 400 (K) DRPHAsGtDGDEsEEDPPEHKPSK (L) DRPHAS(0.99)GT(0.99)DGDES(0.99)EEDPPEHKPS(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T TGS1 97473.9 2 12 1387.1 147.41 HUMAN 1 -15.9697 -2.8735 SKDSLVQSCPGSLSL-p Q9UQ35;S1028-p SKDSLVQSCPGSLSL 0.506609842161293 0.0317929518081462 0.119 0.541333333333333 5.44551420023206 20.2229978500286 0.119 0.541333333333334 0.28539645872889 0.00949948836147659 1.18511068223395 3.92324887538253 Q9UQ35 SRRM2 Q9UQ35.S1028.p_SRRM2 Q9UQ35_S1028s _1_1_1028_1028 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19727.19727.3 17.26 17.26 2.869 5 1 1 0 954.1684 2780.5253 S1028s TMT10 1021 (K) SKDSLVQsCPGSLSLCAGVK (S) S(0.0)KDS(0.0)LVQS(0.99)CPGS(0.0)LS(0.0)LCAGVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SRRM2 300351.7 2 50 2.1 3310.34 HUMAN 1 5.4455 20.223 SKDYDVYSDNDICSQ-p A0A0C4DGZ1;S77-p SKDYDVYSDNDICSQ 0.248650960362662 0.560392494075147 -0.276333333333333 -0.0616666666666666 11.5380667561445 3.39079792083165 -0.276333333333333 -0.0616666666666666 0.0701767617842508 0.458057720925963 -2.2506580886817 -0.798608280714755 A0A0C4DGZ1 NotFound A0A0C4DGZ1.S77.p_NotFound A0A0C4DGZ1_S77s _1_1_77_77 A0A0C4DGZ1 A0A0C4DGZ1|Q8N5P1 Zinc finger CCCH domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20085.20085.3 23.86 25.63 4.139 5 1 1 0 1018.101 2972.3144 S77s TMT10 72 (K) DYDVYsDNDICSQESEDNFAK (E) DY(0.0)DVY(0.0)S(0.99)DNDICS(0.0)QES(0.0)EDNFAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZC3H8 34999.7 5 4 1997.1 103.4 HUMAN 1 -11.5381 -3.3908 SKEADIDSSDESDIE-p Q9P2I0;S419-p SKEADIDSSDESDIE 0.573276533538498 0.130632858899369 -0.104666666666667 0.180333333333333 4.44629617273273 11.6479553851877 -0.104666666666667 0.180333333333333 0.359228167383332 0.0684233701821738 -1.00153463760123 2.26894955664817 Q9P2I0 CPSF2 Q9P2I0.S419.p_CPSF2 Q9P2I0_S419sS420sS423s_3_3_419_423 Q9P2I0 Q9P2I0 Cleavage and polyadenylation specificity factor subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20023.20442.3 15.82 15.82 10.709 4 3 3 0 1081.7695 3003.3955 S419s S420s S423s TMT10 414 (K) EADIDssDEsDIEEDIDQPSAHK (T) EADIDS(0.99)S(0.99)DES(0.99)DIEEDIDQPS(0.0)AHK K:TMT10,s:Phosphorylated S CPSF2 89341 7 3 3554.1 48.31 HUMAN 1 -4.4463 11.648 SKEEEMETESDAEVE-p Q9NWZ8;T124-p SKEEEMETESDAEVE 0.322902320626858 0.614131621377045 0.174666666666667 0.0496666666666667 9.19168455220053 2.87897549052784 0.174666666666667 0.0496666666666667 0.120456861868333 0.515350202399049 1.84154958484689 0.695626404803778 Q9NWZ8 GEMIN8 Q9NWZ8.T124.p_GEMIN8 Q9NWZ8_T124tS126s_2_2_124_126 Q9NWZ8 Q9NWZ8 Gem-associated protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26519.26519.5 21.89 21.89 3.518 7 2 2 0 1073.6924 5204.49 T124t S126s TMT10 106 (R) IQASTKEDQALSKEEEMEtEsDAEVECDLSNMEITEELR (Q) IQAS(0.0)T(0.0)KEDQALS(0.0)KEEEMET(0.99)ES(0.99)DAEVECDLS(0.0)NMEIT(0.0)EELR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S GEMIN8 28921.4 6 5 2387.1 85.57 HUMAN 1 9.1917 2.879 SKEEERPSSEDEIAL-p P41182;S307-p SKEEERPSSEDEIAL 0.308184669593711 0.586854778928161 0.168666666666667 0.0563333333333334 9.55364622069805 3.12937520288428 0.168666666666667 0.0563333333333334 0.11082439724654 0.486477187626203 1.90425662713923 0.746462171487698 P41182 BCL6 P41182.S307.p_BCL6 P41182_S307sS308s_2_2_307_308 P41182 P41182|P41182-2 B-cell lymphoma 6 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19503.19503.4 12.04 6.41 1.135 3 2 2 0 920.9363 3520.8072 S307s S308s TMT10 299 (K) ASKEEERPssEDEIALHFEPPNAPLNR (K) AS(0.0)KEEERPS(0.99)S(0.99)EDEIALHFEPPNAPLNR K:TMT10,s:Phosphorylated S BCL6 80670.9 2 16 557.1 273.04 HUMAN 1 9.5536 3.1294 SKEELMSSDLEETAG-p O00567;S520-p SKEELMSSDLEETAG 0.0868192866229433 0.0462213034011671 1.11 -0.823666666666667 22.6664786735206 17.8667900563012 1.11 -0.823666666666667 0.00541192952670449 0.0163425941028056 4.47602285615308 -3.43257221914862 O00567 NOP56 O00567.S520.p_NOP56 O00567_S520s _1_1_520_520 O00567 O00567 Nucleolar protein 56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18875.18875.5 14.83 14.83 1.241 8 1 1 0 751.6024 3674.0128 S520s TMT10 510 (K) KSFSKEELMSsDLEETAGSTSIPKR (K) KS(0.0)FS(0.0)KEELMS(0.0)S(0.99)DLEET(0.0)AGS(0.0)T(0.0)S(0.0)IPKR K:TMT10,s:Phosphorylated S NOP56 66448.1 1 8 262.1 396.77 HUMAN 1 22.6665 -17.8668 SKEELSHSPEPCTKM-p P41229;S301-p SKEELSHSPEPCTKM 0.743332697084522 0.108373700824997 -0.0586666666666667 0.212333333333333 2.44760969613704 12.74998433484 -0.0586666666666667 0.212333333333333 0.569166106735584 0.0530886359153954 -0.60579528933381 2.46479018084733 P41229 KDM5C P41229.S301.p_KDM5C P41229_S301s _1_1_301_301 P41229 P41229|P41229-5|P41229-2|P41229-3|P41229-4 Lysine-specific demethylase 5C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16619.16619.4 17.83 13.56 3.205 5 1 1 0 722.3692 2806.49 S301s TMT10 290 (K) TFLESKEELSHsPEPCTK (M) T(0.0)FLES(0.0)KEELS(0.0)HS(0.99)PEPCT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S KDM5C 178398.7 9 2 1409.1 145.61 HUMAN 1 -2.4476 12.75 SKEEPVSSGPEEAVG-p O00567;S570-p SKEEPVSSGPEEAVG 0.414715625274144 0.861839640259032 -0.123 0.024 7.0523393371746 0.910281312013463 -0.123 0.0240000000000001 0.197136057218427 0.810908529970322 -1.47017186256482 0.251195061028628 O00567 NOP56 O00567.S570.p_NOP56 O00567_S570s _1_1_570_570 O00567 O00567 Nucleolar protein 56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15764.15970.3 17.71 17.71 1.188 3 1 1 0 848.7789 2464.3538 S570s TMT10 562 (K) FSKEEPVSsGPEEAVGK (S) FS(0.0)KEEPVS(0.0)S(0.99)GPEEAVGK K:TMT10,s:Phosphorylated S NOP56 66448.1 12 11 262.1 396.77 HUMAN 1 -7.0523 0.9103 SKEKDRQSPLHGNHI-p Q86VQ1;S258-p SKEKDRQSPLHGNHI 0.812778255129154 0.959283227928085 -0.037 0.014 1.73232393939915 0.260145754974631 -0.037 0.014 0.671069662877524 0.94185798599214 -0.448671972862776 0.0763773813145765 Q86VQ1 GLCCI1 Q86VQ1.S258.p_GLCCI1 Q86VQ1_S258s _1_1_258_258 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4394.4394.5 20.21 20.21 5.705 6 1 1 0 545.2729 2642.3709 S258s TMT10 255 (K) DRQsPLHGNHITISHTQATGSR (S) DRQS(0.99)PLHGNHIT(0.0)IS(0.0)HT(0.0)QAT(0.0)GS(0.0)R s:Phosphorylated S GLCCI1 58707.2 1 9 307.1 373.49 HUMAN 1 -1.7323 0.2601 SKEKERASLDKKRDK-p Q9NWH9;S590-p SKEKERASLDKKRDK 0.137325721125408 0.0108809847099449 0.570666666666667 -0.884333333333333 17.6637311088909 27.5100306573086 0.570666666666667 -0.884333333333334 0.0171248544558449 0.00177417695674244 3.39452785538973 -5.70082732571549 Q9NWH9 SLTM Q9NWH9.S590.p_SLTM Q9NWH9_S590s _1_1_590_590 Q9NWH9 Q9NWH9|Q9NWH9-3 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6658.6658.3 7.79 7.79 99 1 1 1 0 452.9146 1276.7625 S590s TMT10 587 (K) ERAsLDK (K) ERAS(1.0)LDK K:TMT10,s:Phosphorylated S SLTM 117431.6 4 13 167.1 494.15 HUMAN 1 17.6637 -27.51 SKEKGRGSWGGRHHH-p Q7L2J0;S390-p SKEKGRGSWGGRHHH 0.491826652904497 0.026124045466515 -0.118333333333333 -0.469666666666667 5.67352362934734 21.5225432280228 -0.118333333333333 -0.469666666666667 0.27079936215181 0.00704280521586766 -1.22617862525805 -4.20926562862295 Q7L2J0 MEPCE Q7L2J0.S390.p_MEPCE Q7L2J0_S390s _1_1_390_390 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3905.3905.3 9.89 9.89 99 1 1 1 0 381.1866 1061.5802 S390s TMT10 387 (K) GRGsWGGR (H) GRGS(1.0)WGGR s:Phosphorylated S MEPCE 74981.5 2 14 428.1 317.7 HUMAN 1 -5.6735 -21.5225 SKENRNFSEDVLGWR-p O15492;S56-p SKENRNFSEDVLGWR 1 0.436696446947909 -4.62592926927149e-18 0.0806666666666667 4.82163733276644e-16 4.79318015787322 -1.60246890531964e-17 0.0806666666666667 1 0.331651514004013 -1.65856473960462e-16 1.0658094189347 O15492 RGS16 O15492.S56.p_RGS16 O15492_S56s_1_1_56_56 O15492 O15492 Regulator of G-protein signaling 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20771.20771.3 7.1 4.79 99 1 1 1 0 644.9543 1850.9347 N52n N54n S56s TMT10 51 (K) EnRnFsEDVLGWR (E) EN(1.0)RN(1.0)FS(1.0)EDVLGWR n:Deamidated,s:Phosphorylated S RGS16 23147.6 2 1 7260.1 7.1 HUMAN 1 0 4.7932 SKEPKDGSPVQPSLL-p Q8NFU7;S871-p SKEPKDGSPVQPSLL 0.530950321566452 0.0823409353972692 -0.0933333333333333 -0.309333333333333 5.08678356131129 14.3666406758024 -0.0933333333333333 -0.309333333333333 0.309971413597591 0.0365877693330555 -1.11993812831054 -2.75877870910811 Q8NFU7 TET1 Q8NFU7.S871.p_TET1 Q8NFU7_S871s _1_1_871_871 Q8NFU7 Q8NFU7 Methylcytosine dioxygenase TET1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31037.31037.3 7.87 7.87 5.844 3 1 1 0 670.6976 1930.1084 S871s TMT10 869 (K) DGsPVQPSLLSLMK (D) DGS(0.99)PVQPS(0.0)LLS(0.0)LMK K:TMT10,s:Phosphorylated S TET1 238100.1 1 1 4433.1 31.46 HUMAN 1 -5.0868 -14.3666 SKERNLVSWESQTQP-p O15400;S144-p SKERNLVSWESQTQP 0.34874773875041 0.278328404471092 0.135666666666667 0.106666666666667 8.50210311567786 7.31841091789921 0.135666666666667 0.106666666666667 0.141185367439362 0.185420995412761 1.72217076928197 1.51620409704199 O15400 STX7 O15400.S144.p_STX7 O15400_S144s _1_1_144_144 O15400 O15400|O15400-2 Syntaxin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.26349.26349.3 16.09 16.09 1.15 4 1 1 0 1132.5374 3315.6178 S144s TMT10 141 (R) NLVsWESQTQPQVQVQDEEITEDDLR (L) NLVS(0.99)WES(0.0)QT(0.0)QPQVQVQDEEIT(0.0)EDDLR s:Phosphorylated S STX7 29929.1 3 9 1215.1 165.8 HUMAN 1 8.5021 7.3184 SKERVRASLSDLSSL-p Q969K3-2;S255-p SKERVRASLSDLSSL 0.491273131309244 0.861625065303233 0.0936666666666667 0.018 5.68268300371759 0.912512879665121 0.0936666666666667 0.018 0.270228841660157 0.810491961839818 1.22782309592857 0.251762386592002 Q969K3 RNF34 Q969K3.2.S255.p_RNF34 Q969K3-2_S255s _1_1_255_255 Q969K3-2 H7BYJ1|Q969K3-2|A0A087WTM5 Isoform 2 of E3 ubiquitin-protein ligase RNF34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22534.22534.2 19.66 19.66 2.313 5 1 1 0 1108.5173 2136.0601 S255s Hydrogen 252 (R) VRAsLSDLSSLDDVEGMSVR (Q) VRAS(0.99)LS(0.0)DLS(0.0)S(0.0)LDDVEGMS(0.0)VR s:Phosphorylated S RNF34 43108.4 9 3 1566.1 131.12 HUMAN 1 5.6827 0.9125 SKEVEERSRERPSQP-p Q04637-9;S1201-p SKEVEERSRERPSQP 0.0668913505644243 0.00319839337295755 -0.589333333333333 -0.880666666666667 25.3129798757802 37.4290405055051 -0.589333333333334 -0.880666666666667 0.00294240203611576 0.000180757343230112 -5.1234842134446 -9.03297860543634 Q04637 EIF4G1 Q04637.9.S1201.p_EIF4G1 Q04637-9_S1201s _1_1_1201_1201 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1|Q04637-4|E7EX73|Q04637-5|Q04637-7|Q04637-6 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3588.3588.3 9.33 9.33 4.182 2 1 1 0 497.9073 1411.7401 S1201s Hydrogen 1201 (R) sRERPSQPEGLR (K) S(0.99)RERPS(0.0)QPEGLR s:Phosphorylated S EIF4G1 176975.4 3 26 107.1 585.61 HUMAN 1 -25.313 -37.429 SKEWYHASLTRAQAE-p P19174-2;S672-p SKEWYHASLTRAQAE 0.878443024385905 0.689736990388935 0.0236666666666667 -0.0383333333333333 1.10573373389117 2.21054762924515 0.0236666666666667 -0.0383333333333333 0.775222959560672 0.601097936482362 0.300194305438898 -0.554873450047389 P19174 PLCG1 P19174.2.S672.p_PLCG1 P19174-2_S672s _1_1_672_672 P19174-2 P19174-2 Isoform 2 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12899.12899.3 11.97 11.97 1.437 3 1 1 0 491.2357 1391.7269 S672s TMT10 667 (K) EWYHAsLTR (A) EWY(0.0)HAS(0.99)LT(0.0)R s:Phosphorylated S PLCG1 149969.8 1 4 1779.1 115.42 HUMAN 1 1.1057 -2.2105 SKEYDRLYEEYTRTS-p F6TDL0;Y245-p SKEYDRLYEEYTRTS 0.864901984525087 0.00825803939985841 -0.026 -0.715666666666667 1.22553886563884 29.6381819814216 -0.026 -0.715666666666667 0.754129818821907 0.00108688051206698 -0.329533389395304 -6.31294266459025 F6TDL0 PIK3R3 F6TDL0.Y245.p_PIK3R3 F6TDL0_Y245y _1_1_245_245 F6TDL0 F6TDL0|Q92569|Q92569-2 Uncharacterized protein GG20160819_MSz_CCLE_T4D7_pY_Injection_02.13450.13450.3 16.88 8.68 3.862 5 1 1 0 764.0441 2210.1494 Y245y TMT10 238 (K) SKEYDRLyEEYTR (T) S(0.0)KEY(0.0)DRLY(0.99)EEY(0.0)T(0.0)R K:TMT10,y:Phosphorylated Y LOC110117498-PIK3R3 59735.5 2 1 9.2 106.64 HUMAN 1 -1.2255 -29.6382 SKFNYSGSGGRSGGN-p Q12906-7;S816-p SKFNYSGSGGRSGGN 0.238311937705907 0.0512566026928885 -0.182 -0.228333333333333 11.9160021948739 17.2227957091206 -0.182 -0.228333333333333 0.0643279602154718 0.0189548533658915 -2.31744454005191 -3.30408689989961 Q12906 ILF3 Q12906.7.S816.p_ILF3 Q12906-7_S816s _1_1_816_816 Q12906-7 Q12906-7 Isoform 7 of Interleukin enhancer-binding factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9383.9589.2 8.96 5.44 1.271 3 1 1 0 627.2791 1173.585 S816s TMT10 811 (K) FNYSGsGGR (S) FNY(0.0)S(0.0)GS(0.99)GGR s:Phosphorylated S ILF3 96205.6 2 17 130.1 537.24 HUMAN 1 -11.916 -17.2228 SKFRRKASEEIEDFR-p Q96FT9;S78-p SKFRRKASEEIEDFR 0.511272956349633 0.149208662656429 0.092 0.174 5.38470470623263 10.8746117109738 0.092 0.174 0.28942065987768 0.0817596133372772 1.17411336177222 2.13320742568052 Q96FT9 IFT43 Q96FT9.S78.p_IFT43 Q96FT9_S78s _1_1_78_78 Q96FT9 Q96FT9|Q96FT9-3 Intraflagellar transport protein 43 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10940.10940.2 10.99 2.79 99 1 1 1 0 766.8639 1452.7532 S78s Hydrogen 76 (R) KAsEEIEDFR (L) KAS(1.0)EEIEDFR K:TMT10-Lys-Only,s:Phosphorylated S IFT43 23585.7 4 1 5593.1 17.89 HUMAN 1 5.3847 10.8746 SKFSEQDSPPPSHPL-p Q9Y2K6;S112-p SKFSEQDSPPPSHPL 0.781783194314642 0.135464638890742 -0.04 -0.177666666666667 2.05149442133095 11.4434281997397 -0.04 -0.177666666666667 0.623520243235218 0.0717227908013051 -0.520175888054967 -2.23293106095486 Q9Y2K6 USP20 Q9Y2K6.S112.p_USP20 Q9Y2K6_S112s _1_1_112_112 Q9Y2K6 Q9Y2K6 Ubiquitin carboxyl-terminal hydrolase 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12212.12212.3 15.58 15.58 4.542 3 1 1 0 702.0218 2024.0853 S112s TMT10 107 (K) FSEQDsPPPSHPLK (A) FS(0.0)EQDS(0.99)PPPS(0.0)HPLK K:TMT10,s:Phosphorylated S USP20 103827 5 2 1704.1 120.18 HUMAN 1 -2.0515 -11.4434 SKFSFLASDTEEEEE-p O15047;S508-p SKFSFLASDTEEEEE 0.246863210495205 0.14215984298869 0.183333333333333 0.161666666666667 11.6148159474205 11.1652821051751 0.183333333333333 0.161666666666667 0.0689474812268565 0.0764666016325616 2.2641940380833 2.18408920371315 O15047 SETD1A O15047.S508.p_SETD1A O15047_S508s _1_1_508_508 O15047 O15047 Histone-lysine N-methyltransferase SETD1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25735.25735.4 23.9 23.9 1.742 6 1 1 0 801.132 3121.54 S508s TMT10 501 (R) SKFSFLAsDTEEEEENSSMVLGAR (D) S(0.0)KFS(0.0)FLAS(0.99)DT(0.0)EEEEENS(0.0)S(0.0)MVLGAR K:TMT10,s:Phosphorylated S SETD1A 186829.5 24 5 570.2 269.37 HUMAN 1 11.6148 11.1653 SKFSSINSDKSLGEK-p Q9UMZ2;S789-p SKFSSINSDKSLGEK 0.244161971200343 0.0705928215491744 -0.188333333333333 0.236333333333333 11.7135471646603 15.3054434445865 -0.188333333333333 0.236333333333333 0.0673977321845836 0.0294751249990789 -2.28162649481935 2.9339735249522 Q9UMZ2 SYNRG Q9UMZ2.S789.p_SYNRG Q9UMZ2_S789s _1_1_789_789 Q9UMZ2 Q9UMZ2|Q9UMZ2-5|Q9UMZ2-7|Q9UMZ2-3|Q9UMZ2-8|Q9UMZ2-4|Q9UMZ2-9|Q9UMZ2-6 Synergin gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14542.14542.2 8.88 3.8 2.519 3 1 1 0 718.3659 1355.7571 S789s TMT10 784 (K) FSSINsDK (S) FS(0.0)S(0.0)INS(0.99)DK K:TMT10,s:Phosphorylated S SYNRG 141393.5 1 7 236.1 418.49 HUMAN 1 -11.7135 15.3054 SKFTRTISPPTLGTL-p Q9UQ84;S598-p SKFTRTISPPTLGTL 0.982842045127411 0.00106093798192059 0.00299999999999998 -1.15866666666667 0.147835364508502 50.528850280071 0.00327436288620824 -1.15866666666667 0.96653250363254 8.85349959980569e-06 0.043934256854294 -16.0553190591371 Q9UQ84 EXO1 Q9UQ84.S598.p_EXO1 Q9UQ84_S598s _1_1_598_598 Q9UQ84 Q9UQ84|Q9UQ84-4 Exonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21463.21670.2 10.23 5.57 1.907 4 1 1 0 732.9052 1384.8361 S598s TMT10 596 (R) TIsPPTLGTLR (S) T(0.0)IS(0.99)PPT(0.0)LGT(0.0)LR s:Phosphorylated S EXO1 95242.6 2 5 1477.1 139.01 HUMAN 1 0.1478 -50.5289 SKGAPNNSCSEIKMN-p Q05086;S107-p SKGAPNNSCSEIKMN 0.205745646167926 0.4718149114637 0.275333333333333 -0.135333333333333 13.2781578452988 4.34820617408032 0.275333333333333 -0.135333333333333 0.0470093466710967 0.36743403546632 2.56131238505018 -0.982954042398845 Q05086 UBE3A Q05086.S107.p_UBE3A Q05086_S107s _1_1_107_107 Q05086 Q05086|Q05086-3 Ubiquitin-protein ligase E3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8392.8392.3 8.65 8.65 1.818 2 1 1 0 572.2816 1634.8572 S107s TMT10 102 (K) GAPNNsCSEIK (M) GAPNNS(0.99)CS(0.0)EIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UBE3A 101655.7 2 1 4183.1 35.77 HUMAN 1 13.2782 -4.3482 SKGATVYSPSRYSYQ-p E7EWN3;S1252-p SKGATVYSPSRYSYQ 0.283800433388815 0.522306919586435 0.180666666666667 -0.088 10.3209116793095 3.79079131175889 0.180666666666667 -0.088 0.0928771396840605 0.417754242271076 2.03752311994186 -0.876778932016652 E7EWN3 SETD5 E7EWN3.S1252.p_SETD5 E7EWN3_S1252s _1_1_1252_1252 E7EWN3 E7EWN3|Q9C0A6|Q9C0A6-3|Q9C0A6-2 SET domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20467.20467.3 14.78 9.55 1.85 8 1 1 0 919.7709 2677.3242 S1252s TMT10 1247 (K) GATVYsPSRYSYQLLQCDSPR (T) GAT(0.0)VY(0.0)S(0.99)PS(0.0)RY(0.0)S(0.0)Y(0.0)QLLQCDS(0.0)PR C:Carbamidomethylation,s:Phosphorylated S SETD5 161030.5 2 13 773.1 227.48 HUMAN 1 10.3209 -3.7908 SKGDSDISDEEAAQQ-p Q5T200;S1017-p SKGDSDISDEEAAQQ 0.0476372614756949 0.00362308686222021 0.493333333333333 1.35966666666667 29.3704858013592 36.2964700307142 0.493333333333333 1.35966666666667 0.00115598292682876 0.000234613499188411 6.24285560298753 8.5839618738647 Q5T200 ZC3H13 Q5T200.S1017.p_ZC3H13 Q5T200_S1017s _1_1_1017_1017 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8012.8012.4 18.59 14.37 2.8 4 1 1 0 730.6334 2839.5455 S1017s TMT10 1010 (K) SKGDSDIsDEEAAQQSKK (K) S(0.0)KGDS(0.0)DIS(0.99)DEEAAQQS(0.0)KK K:TMT10,s:Phosphorylated S ZC3H13 197316.7 6 20 24.1 987.82 HUMAN 1 29.3705 36.2965 SKGEPRDSGTLQSQE-p Q641Q2;S648-p SKGEPRDSGTLQSQE 0.164162708749184 0.00868295677400181 -0.240333333333333 -0.573333333333333 15.7184986667454 29.2341216988445 -0.240333333333333 -0.573333333333333 0.0268009465936778 0.00119285548016024 -3.01432377137461 -6.1929579237861 Q641Q2 FAM21A Q641Q2.S648.p_FAM21A Q641Q2_S648s _1_1_648_648 Q641Q2 Q641Q2|A0A0A0MR88|A0A096LPC5|Q641Q2-2|Q9Y4E1-4|Q9Y4E1-2|E7ESD2|Q9Y4E1-6|Q9Y4E1-3|J3KP36|F8W7U3|A0A087WYF6|Q9Y4E1-5 WASH complex subunit 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6202.6202.3 12.09 6.31 1.135 4 1 1 0 862.457 2505.3876 S648s TMT10 641 (R) SKGEPRDsGTLQSQEAK (A) S(0.0)KGEPRDS(0.99)GT(0.0)LQS(0.0)QEAK K:TMT10,s:Phosphorylated S WASHC2A 147352.2 2 39 12.1 1178.3 HUMAN 1 -15.7185 -29.2341 SKGHKKISWPYPQPA-p Q9NVN8;S22-p SKGHKKISWPYPQPA 0.685449015532138 0.00493909262777022 -0.0573333333333333 -0.530666666666667 3.07698487773651 33.6440586840769 -0.0573333333333333 -0.530666666666667 0.492381256455197 0.000432109815543484 -0.736005884791773 -7.60813349645714 Q9NVN8 GNL3L Q9NVN8.S22.p_GNL3L Q9NVN8_S22s _1_1_22_22 Q9NVN8 Q9NVN8 Guanine nucleotide-binding protein-like 3-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20831.20831.3 10.77 10.77 2.278 2 1 1 0 694.7317 2002.2093 S22s TMT10 20 (K) KIsWPYPQPAK (Q) KIS(0.99)WPY(0.0)PQPAK K:TMT10,s:Phosphorylated S GNL3L 66256.7 1 1 3327.1 53.86 HUMAN 1 -3.077 -33.6441 SKGKDSLSDDGVDLK-p P07948-2;S13-p SKGKDSLSDDGVDLK 0.51428507339171 0.0849018631701529 -0.119 -0.249333333333333 5.33119105315849 14.1771164677343 -0.119 -0.249333333333333 0.293008955762288 0.0382197949940299 -1.16441912337763 -2.72383660199711 P07948 LYN P07948.2.S13.p_LYN P07948-2_S13s _1_1_13_13 P07948-2 P07948|P07948-2 Isoform 2 of Tyrosine-protein kinase Lyn HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15607.15607.3 12.79 8.41 2.737 2 1 1 0 706.0434 2036.1479 S13s TMT10 8 (K) GKDSLsDDGVDLK (T) GKDS(0.0)LS(0.99)DDGVDLK K:TMT10,s:Phosphorylated S LYN 56488.7 7 1 2975.1 64.28 HUMAN 1 -5.3312 -14.1771 SKGKEKDSPFKPKLY-p Q15291;S497-p SKGKEKDSPFKPKLY 0.118574736750033 0.000952253650599092 -0.483333333333333 -1.41433333333333 19.265865044727 54.8813481989897 -0.483333333333333 -1.41433333333333 0.0118416847619873 3.24986394803833e-06 -3.72313834912457 -19.3690395221427 Q15291 RBBP5 Q15291.S497.p_RBBP5 Q15291_S497s _1_1_497_497 Q15291 Q15291 Retinoblastoma-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11578.11578.2 10.56 10.56 99 1 1 1 0 793.4507 1505.9295 S497s TMT10 496 (K) DsPFKPK (L) DS(1.0)PFKPK K:TMT10,s:Phosphorylated S RBBP5 59836.2 8 6 1667.1 122.41 HUMAN 1 -19.2659 -54.8813 SKGLQRGSPAGAWDS-p Q8N398;S1004-p SKGLQRGSPAGAWDS 0.698903056964039 0.0355197046291181 0.0873333333333333 -0.367666666666667 2.92392909524522 19.5099839492814 0.0873333333333333 -0.367666666666667 0.510043351075038 0.0111944202070961 0.704918631207062 -3.7711489030266 Q8N398 VWA5B2 Q8N398.S1004.p_VWA5B2 Q8N398_S1004s _1_1_1004_1004 Q8N398 Q8N398|Q8N398-2|E9PF42 von Willebrand factor A domain-containing protein 5B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10574.10574.3 10.3 10.3 3.756 3 1 1 0 861.7529 2503.269 S1004s TMT10 999 (K) GLQRGsPAGAWDSDQNGNSK (R) GLQRGS(0.99)PAGAWDS(0.0)DQNGNS(0.0)K K:TMT10,s:Phosphorylated S VWA5B2 134815.6 1 4 3362.1 52.86 HUMAN 1 2.9239 -19.51 SKGNSPPSSGEACRE-p P41227;S189-p SKGNSPPSSGEACRE 0.0719549135296335 0.36962998145014 0.487 -0.148333333333333 24.6402527658091 5.73318787881884 0.487 -0.148333333333333 0.00343537952901263 0.267104504507465 4.95323709901003 -1.23660169422085 P41227 NAA10 P41227.S189.p_NAA10 P41227_S189s _1_1_189_189 P41227 P41227|P41227-2 N-alpha-acetyltransferase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5113.5113.3 10.18 10.18 1.178 3 1 1 0 715.0016 2063.0228 S189s TMT10 184 (K) GNSPPsSGEACREEK (G) GNS(0.0)PPS(0.99)S(0.0)GEACREEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NAA10 26629.2 1 3 1452.1 140.76 HUMAN 1 24.6403 -5.7332 SKGPPDFSSDEEREP-p P42166;S66-p SKGPPDFSSDEEREP 0.384620913819272 0.530391467363541 0.135 -0.0766666666666667 7.68201810057044 3.70311915892279 0.135 -0.0766666666666667 0.170528978257034 0.426273253890079 1.57994573282638 -0.859799545682817 P42166 TMPO P42166.S66.p_TMPO P42166_S66s _1_1_66_66 P42166 P42166|P42167|G5E972|P42167-2|P42167-3 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16410.16410.5 15.88 15.88 1.168 6 1 1 0 869.0399 4261.2002 S66s TMT10 49 (R) NRPPLPAGTNSKGPPDFsSDEEREPTPVLGSGAAAAGR (S) NRPPLPAGT(0.0)NS(0.0)KGPPDFS(0.99)S(0.0)DEEREPT(0.0)PVLGS(0.0)GAAAAGR K:TMT10,s:Phosphorylated S TMPO 76061.2 10 2 123.1 546.19 HUMAN 1 7.682 -3.7031 SKGSRHGSEEAYIDP-p Q9GZY6;S106-p SKGSRHGSEEAYIDP 0.500562123425219 0.930980441078259 0.0966666666666667 0.00966666666666668 5.54032715980498 0.437781764192137 0.0966666666666667 0.00966666666666667 0.279233348312187 0.904111146552588 1.20221924910922 0.126213518811902 Q9GZY6 LAT2 Q9GZY6.S106.p_LAT2 Q9GZY6_S106s _1_1_106_106 Q9GZY6 Q9GZY6 Linker for activation of T-cells family member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27214.27214.3 13.6 13.6 6.947 4 1 1 0 904.0625 2630.2183 S106s TMT10 104 (R) HGsEEAYIDPIAMEYYNWGR (F) HGS(0.99)EEAY(0.0)IDPIAMEY(0.0)Y(0.0)NWGR s:Phosphorylated S LAT2 26835 1 1 3908.1 40.93 HUMAN 1 5.5403 0.4378 SKGTLVQTKGTGASG-p P16402;T97-p SKGTLVQTKGTGASG 0.165369748740517 0.250441300337034 -0.281333333333333 0.13 15.6452900637714 7.92230736720554 -0.281333333333333 0.13 0.0272565568725527 0.161350109056458 -3.00037474890304 1.621171463685 P16402 HIST1H1D P16402.T97.p_HIST1H1D P16402_T97t _1_1_97_97 P16402 P16401|P16402|P10412|Q02539|P16403 Histone H1.3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10879.10879.2 9.38 4.24 5.674 2 1 1 0 642.8695 1204.7665 T97t TMT10 92 (K) GTLVQtK (G) GT(0.0)LVQT(0.99)K K:TMT10,t:Phosphorylated T HIST1H1D 22349.5 1 19 738.1 234.77 HUMAN 1 -15.6453 7.9223 SKGVDFESSEDDDDD-p P49959;S688-p SKGVDFESSEDDDDD 0.377818064461619 0.147228921248642 0.12 0.149333333333333 7.81408899035073 10.9513987571764 0.12 0.149333333333333 0.165421174861233 0.0803267367584874 1.60289259197974 2.14663410826105 P49959 MRE11A P49959.S688.p_MRE11A P49959_S688sS689s_2_2_688_689 P49959 P49959-3|F8W7U8|P49959-2 Double-strand break repair protein MRE11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28285.28285.2 17.98 17.98 8.014 5 2 2 0 1434.0529 2707.1515 S688s S689s TMT10 683 (K) GVDFEssEDDDDDPFMNTSSLR (R) GVDFES(0.99)S(0.99)EDDDDDPFMNT(0.0)S(0.0)S(0.0)LR s:Phosphorylated S MRE11 80934.2 27 11 588.1 264.48 HUMAN 1 7.8141 10.9514 SKGVKQKSPPAAVAV-p P51826-2;S574-p SKGVKQKSPPAAVAV 0.384885130706101 0.780169837329772 0.142 0.0306666666666667 7.67538645628378 1.49174612348504 0.142 0.0306666666666667 0.17078957364555 0.709292532619177 1.57879292587577 0.393011002250884 P51826 AFF3 P51826.2.S574.p_AFF3 P51826-2_S574s _1_1_574_574 P51826-2 P51826-2 Isoform 2 of AF4/FMR2 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20474.20474.4 24.08 24.08 16.371 2 1 1 0 974.775 3816.1107 S574s TMT10 572 (K) QKsPPAAVAVAVSAAAPPPAVPCAPAENAPAPARR (S) QKS(0.99)PPAAVAVAVS(0.0)AAAPPPAVPCAPAENAPAPARR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S AFF3 137490.8 6 1 632.2 256.73 HUMAN 1 7.6754 1.4917 SKHSTSGTDEGEDGD-p Q14008-3;T832-p SKHSTSGTDEGEDGD 0.255523666986709 0.0585270371817823 0.193 0.303666666666667 11.2649462718237 16.4168591911453 0.193 0.303666666666667 0.0747317879479925 0.0228199180721677 2.20259233180292 3.14635107746504 Q14008 CKAP5 Q14008.3.T832.p_CKAP5 Q14008-3_T832t _1_1_832_832 Q14008-3 Q14008-3|Q14008-2 Isoform 3 of Cytoskeleton-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20650.20650.3 22.41 22.41 2.313 5 1 1 0 1079.7918 3157.3879 T832t TMT10 827 (K) HSTSGtDEGEDGDEPDDGSNDVVDLLPR (T) HS(0.0)T(0.0)S(0.0)GT(0.99)DEGEDGDEPDDGS(0.0)NDVVDLLPR t:Phosphorylated T CKAP5 228079.2 1 3 1323.1 154.15 HUMAN 1 11.2649 16.4169 SKIGEEQSAEDAEDG-p Q16576;S354-p SKIGEEQSAEDAEDG 0.187863102695022 0.668990133242619 -0.210333333333333 0.0466666666666667 14.2489646921416 2.38763496324518 -0.210333333333333 0.0466666666666667 0.0375927010262593 0.577080638548948 -2.73874444351242 0.592958621894107 Q16576 RBBP7 Q16576.S354.p_RBBP7 Q16576_S354s _1_1_354_354 Q16576 Q16576-2|E9PC52 Histone-binding protein RBBP7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22248.22248.5 27.81 27.81 27.807 2 1 1 0 677.9327 3305.669 S354s TMT10 349 (K) IGEEQsAEDAEDGPPELLFIHGGHTAK (I) IGEEQS(0.99)AEDAEDGPPELLFIHGGHT(0.0)AK K:TMT10,s:Phosphorylated S RBBP7 48161.5 6 7 1734.1 118.69 HUMAN 1 -14.249 2.3876 SKIGEEQSPEDAEDG-p Q09028;S355-p SKIGEEQSPEDAEDG 0.275717902604065 0.0804080974031953 0.174666666666667 0.239 10.5854099358961 14.5238307843605 0.174666666666667 0.239 0.0873894500722022 0.0352871774623927 2.08362553898533 2.78786433248205 Q09028 RBBP4 Q09028.S355.p_RBBP4 Q09028_S355s _1_1_355_355 Q09028 Q09028|Q09028-2|Q09028-3|Q09028-4 Histone-binding protein RBBP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22389.22389.4 23.06 23.06 23.058 2 1 1 0 853.6673 3331.6847 S355s TMT10 350 (K) IGEEQsPEDAEDGPPELLFIHGGHTAK (I) IGEEQS(0.99)PEDAEDGPPELLFIHGGHT(0.0)AK K:TMT10,s:Phosphorylated S RBBP4 47940.1 3 2 1734.2 118.69 HUMAN 1 10.5854 14.5238 SKIHNVGSPLKSQNH-p P52701;S830-p SKIHNVGSPLKSQNH 0.726047754139629 0.0320503118559129 -0.0616666666666667 -0.637666666666667 2.63708582298425 20.1776890639246 -0.0616666666666667 -0.637666666666666 0.544868144386993 0.00959911276620656 -0.645684648811787 -3.91348493554375 P52701 MSH6 P52701.S830.p_MSH6 P52701_S830s _1_1_830_830 P52701 P52701|P52701-3|P52701-2|A0A087WWJ1|P52701-4 DNA mismatch repair protein Msh6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12191.12191.3 13.73 13.73 99 1 1 1 0 501.622 1422.8833 S830s TMT10 825 (K) IHNVGsPLK (S) IHNVGS(1.0)PLK K:TMT10,s:Phosphorylated S MSH6 154608.6 1 13 875.1 209.27 HUMAN 1 -2.6371 -20.1777 SKIHSIRSLASQPTE-p A0A1B0GV68;S373-p SKIHSIRSLASQPTE 0.65332034533549 0.0724034151142646 0.0636666666666666 0.319 3.46682083583756 15.1515289296437 0.0636666666666667 0.319 0.450109227601519 0.0305384582039649 0.813733677438645 2.90499999009293 A0A1B0GV68 NotFound A0A1B0GV68.S373.p_NotFound A0A1B0GV68_S370sS373s_2_2_370_373 A0A1B0GV68 Q9Y4F1-2|C9JME2|A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27020.27024.4 12.12 12.12 1.13 12 2 2 0 1249.0792 4832.3595 S370s S373s N382n TMT10 368 (K) IHsIRsLASQPTELnSEVLEQSQQSTSLTFGEGAESPGGQSCR (R) IHS(0.99)IRS(0.99)LAS(0.0)QPT(0.0)ELN(1.0)S(0.0)EVLEQS(0.0)QQS(0.0)T(0.0)S(0.0)LT(0.0)FGEGAES(0.0)PGGQS(0.0)CR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated FARP1 88555.5 1 25 147.1 514.5 HUMAN 1 3.4668 15.1515 SKILLVDSPGMGNAD-p Q9UKN8;S611-p SKILLVDSPGMGNAD 0.512178756015011 0.0393543922252008 0.0903333333333333 0.252666666666667 5.37127478397731 18.8515690106638 0.0903333333333333 0.252666666666667 0.290317036219893 0.0130269605792687 1.17168192683735 3.63355041957906 Q9UKN8 GTF3C4 Q9UKN8.S611.p_GTF3C4 Q9UKN8_S611s _1_1_611_611 Q9UKN8 Q9UKN8 General transcription factor 3C polypeptide 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23824.23824.2 23.01 23.01 10.649 4 1 1 0 1529.7186 2978.4665 S611s TMT10 606 (K) ILLVDsPGMGNADDEQQEEGTSSK (Q) ILLVDS(0.99)PGMGNADDEQQEEGT(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S GTF3C4 93292.9 12 3 1958.1 105.19 HUMAN 1 5.3713 18.8516 SKIYRSQSPHYFRSG-p Q9UKJ3;S1035-p SKIYRSQSPHYFRSG 0.205092081604782 0.0480248023052339 0.240666666666667 0.308 13.307743075197 17.6341031361967 0.240666666666667 0.308 0.0466901955084788 0.0172420812138355 2.56667128993839 3.38588849380066 Q9UKJ3 GPATCH8 Q9UKJ3.S1035.p_GPATCH8 Q9UKJ3_S1035s _1_1_1035_1035 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6167.6167.2 13.25 8.7 2.169 3 1 1 0 665.811 1250.6479 S1035s TMT10 1033 (R) SQsPHYFR (S) S(0.0)QS(0.99)PHY(0.0)FR s:Phosphorylated S GPATCH8 165107.3 4 12 231.1 422.52 HUMAN 1 13.3077 17.6341 SKIYSYMSPNKCSGM-p Q9NQR1;S100-p SKIYSYMSPNKCSGM 0.902795808622011 0.00203605351766751 -0.0276666666666667 -0.792 0.871637538440067 41.9711313976872 -0.0276666666666667 -0.792 0.818156238300227 6.35165440841672e-05 -0.241362699394194 -11.0544829689235 Q9NQR1 SETD8 Q9NQR1.S100.p_SETD8 Q9NQR1_S100s _1_1_100_100 Q9NQR1 Q9NQR1|Q9NQR1-2|A0A0C4DFR3 N-lysine methyltransferase KMT5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18508.18508.3 12.93 12.93 3.247 4 1 1 0 547.6096 1560.8496 S100s TMT10 95 (K) IYSYMsPNK (C) IY(0.0)S(0.0)Y(0.0)MS(0.99)PNK K:TMT10,s:Phosphorylated S KMT5A 43402.6 3 1 4621.1 28.68 HUMAN 1 -0.8716 -41.9711 SKKEVKGSPSFLKKG-p Q5T0W9;S764-p SKKEVKGSPSFLKKG 0.206683314343438 0.494258896526599 -0.216666666666667 -0.085 13.2370280196857 4.0914907056226 -0.216666666666667 -0.085 0.0474566631386107 0.38980816297289 -2.55386712805777 -0.934417279133299 Q5T0W9 FAM83B Q5T0W9.S764.p_FAM83B Q5T0W9_S764s _1_1_764_764 Q5T0W9 Q5T0W9 Protein FAM83B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16819.16819.2 10.76 3.42 2.374 2 1 1 0 637.3518 1193.7294 S764s TMT10 763 (K) GsPSFLK (K) GS(0.99)PS(0.0)FLK K:TMT10,s:Phosphorylated S FAM83B 115253.5 8 10 249.1 407.75 HUMAN 1 -13.237 -4.0915 SKKHSAPSSPNAAKR-p H3BM45;S91-p SKKHSAPSSPNAAKR 0.365498843349433 0.458020049166311 0.155 -0.177666666666667 8.11405204666913 4.52136657356096 0.155 -0.177666666666667 0.154381336136371 0.353072052825616 1.6549399853882 -1.01537786451575 H3BM45 ANKFN1 H3BM45.S91.p_ANKFN1 H3BM45_S91sS92s_2_2_91_92 H3BM45 H3BM45|Q8N957 Ankyrin repeat and fibronectin type-III domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4983.4983.3 8.8 8.8 2.456 3 2 2 0 681.3533 1882.1114 S91s S92s TMT10 86 (K) KHSAPssPNAAK (R) KHS(0.0)APS(0.99)S(0.99)PNAAK K:TMT10,s:Phosphorylated S ANKFN1 131209.3 3 5 3372.1 52.61 HUMAN 1 8.1141 -4.5214 SKKKDELSDYAEKST-p P46100;S1061-p SKKKDELSDYAEKST 0.51514462577286 0.662370046767003 -0.143666666666667 0.0516666666666667 5.31912954158785 2.45051586349171 -0.143666666666667 0.0516666666666667 0.29382385054321 0.568785365391417 -1.16223197080907 0.606335402280979 P46100 ATRX P46100.S1061.p_ATRX P46100_S1061s _1_1_1061_1061 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12030.12030.4 13.77 7.9 2.856 2 1 1 0 581.3254 2242.3101 S1061s TMT10 1056 (K) KKDELsDYAEK (S) KKDELS(0.99)DY(0.0)AEK K:TMT10,s:Phosphorylated S ATRX 285034.2 9 32 18.1 1035.36 HUMAN 1 -5.3191 2.4505 SKKKGPRTPSPPPPI-p Q5T200;T263-p SKKKGPRTPSPPPPI 0.690945783326679 0.107288545373446 0.0536666666666667 0.170666666666667 3.01046362540249 12.8052231431611 0.0536666666666667 0.170666666666667 0.4999811572924 0.0524176667798752 0.722536778440111 2.47469419112848 Q5T200 ZC3H13 Q5T200.T263.p_ZC3H13 Q5T200_T263tS265s_2_2_263_265 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25466.25466.4 17.65 17.65 99 2 2 2 0 651.8571 2444.4732 T263t S265s TMT10 263 (R) tPsPPPPIPEDIALGKK (Y) T(1.0)PS(1.0)PPPPIPEDIALGKK K:TMT10,t:Phosphorylated T,s:Phosphorylated S ZC3H13 197316.7 28 34 24.1 987.82 HUMAN 1 3.0105 12.8052 SKKKILATPPQEDAP-p P29401-2;T295-p SKKKILATPPQEDAP 0.340105250121122 0.116903214242003 0.165666666666667 0.212 8.71331602773938 12.2944245973313 0.165666666666667 0.212 0.134483312320832 0.0589600088808868 1.7587374641471 2.383445073524 P29401 TKT P29401.2.T295.p_TKT P29401-2_T295t _1_1_295_295 P29401-2 P29401-2|A0A0B4J1R6|E9PFF2 Isoform 2 of Transketolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25954.26158.3 20.72 20.72 9.321 2 1 1 0 777.0724 2249.2339 T295t TMT10 292 (K) ILAtPPQEDAPSVDIANIR (M) ILAT(0.99)PPQEDAPS(0.0)VDIANIR t:Phosphorylated T TKT 69497 2 6 1447.1 140.91 HUMAN 1 8.7133 12.2944 SKKKREQSNDIARGF-p P45973;S110-p SKKKREQSNDIARGF 0.38707572980181 0.0889735012140798 -0.164666666666667 -0.187333333333333 7.62545905866926 13.9063542181662 -0.164666666666667 -0.187333333333333 0.172764335521333 0.0406784670330801 -1.5701119341368 -2.67414985234754 P45973 CBX5 P45973.S110.p_CBX5 P45973_S110s _1_1_110_110 P45973 P45973 Chromobox protein homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4860.4860.2 12.71 5.26 99 1 1 1 0 621.2903 1161.6061 S110s TMT10 108 (R) EQsNDIAR (G) EQS(1.0)NDIAR s:Phosphorylated S CBX5 22395.7 3 4 1801.1 114.16 HUMAN 1 -7.6255 -13.9064 SKKLGPISPPQPPSV-p Q9Y520-7;S2015-p SKKLGPISPPQPPSV 0.0684521497222417 0.0663989869212601 -0.409 -0.224666666666667 25.0994779269551 15.6668394028428 -0.409 -0.224666666666667 0.00309066694469939 0.0271216470361716 -5.06901567986053 -3.0024112176466 Q9Y520 PRRC2C Q9Y520.7.S2015.p_PRRC2C Q9Y520-7_S2015s _1_1_2015_2015 Q9Y520-7 Q9Y520-7|Q9Y520-5|E7EPN9|Q9Y520-4|Q9Y520-6|Q9Y520-3|Q9Y520-2 Isoform 7 of Protein PRRC2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26935.27143.4 18.96 19.06 10.604 8 1 1 0 1079.8414 4236.3838 S2015s TMT10 2010 (K) KLGPIsPPQPPSVSAWNKPLTSFGSAPSSEGAK (N) KLGPIS(0.99)PPQPPS(0.0)VS(0.0)AWNKPLT(0.0)S(0.0)FGS(0.0)APS(0.0)S(0.0)EGAK K:TMT10,s:Phosphorylated S PRRC2C 317703.2 4 108 36.3 882.05 HUMAN 1 -25.0995 -15.6668 SKKLLSESAQPLKKV-p Q9H3N1;S228-p SKKLLSESAQPLKKV 0.106447952251166 0.0041902045604516 -0.406666666666667 -0.604 20.485499592932 34.9795733864034 -0.406666666666667 -0.604 0.00894231657608457 0.000317718615479967 -3.98392721834549 -8.08669668247612 Q9H3N1 TMX1 Q9H3N1.S228.p_TMX1 Q9H3N1_S228s _1_1_228_228 Q9H3N1 Q9H3N1 Thioredoxin-related transmembrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21074.21074.2 12.15 7.99 2.316 2 1 1 0 812.4591 1543.946 S228s TMT10 224 (K) LLSEsAQPLK (K) LLS(0.0)ES(0.99)AQPLK K:TMT10,s:Phosphorylated S TMX1 32190 7 1 695.1 242.17 HUMAN 1 -20.4855 -34.9796 SKKLSFLSWGTNKNR-p Q8IUC4;S642-p SKKLSFLSWGTNKNR 0.416624556825426 0.0357280708410532 -0.255333333333333 -0.345 7.01860432994412 19.4771329220848 -0.255333333333333 -0.345 0.198673328113323 0.0112794184277427 -1.4642694104637 -3.76421974914183 Q8IUC4 RHPN2 Q8IUC4.S642.p_RHPN2 Q8IUC4_S642s _1_1_642_642 Q8IUC4 Q8IUC4|A8MT19|Q8IUC4-2 Rhophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26188.26188.3 13.92 13.92 3.252 3 1 1 0 683.3901 1968.1885 S642s TMT10 637 (K) KLSFLsWGTNK (N) KLS(0.0)FLS(0.99)WGT(0.0)NK K:TMT10,s:Phosphorylated S RHPN2 77619.5 4 3 1611.1 127.64 HUMAN 1 -7.0186 -19.4771 SKKNELFSNL_____-p O14745;S356-p SKKNELFSNL_____ 0.482238877706587 0.847173800730779 -0.0993333333333333 -0.0233333333333333 5.82883356500602 1.01179436638727 -0.0993333333333334 -0.0233333333333333 0.261286302705454 0.792173961821959 -1.25401104115262 -0.276807001407223 O14745 SLC9A3R1 O14745.S356.p_SLC9A3R1 O14745_S356s _1_1_356_356 O14745 O14745|O14745-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23516.23516.2 7.32 7.32 99 1 1 1 0 751.9041 1422.8357 S356s TMT10 351 (K) KNELFsNL (-) KNELFS(1.0)NL K:TMT10,s:Phosphorylated S SLC9A3R1 39153 2 16 534.1 279.04 HUMAN 1 -5.8288 -1.0118 SKKPKRETNSDSVPP-p O60291-2;T377-p SKKPKRETNSDSVPP 0.788556245854916 0.161298297753186 0.0873333333333333 0.262666666666667 1.98872736019267 10.4197210856399 0.0873333333333333 0.262666666666667 0.632597198062455 0.0907878834467942 0.506304183969936 2.05386397178058 O60291 MGRN1 O60291.2.T377.p_MGRN1 O60291-2_T377t _1_1_377_377 O60291-2 O60291-2 Isoform 2 of E3 ubiquitin-protein ligase MGRN1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.35906.35906.3 11.48 10.01 1.229 5 1 1 0 1012.8458 2956.5577 T377t TMT10 375 (K) REtNSDSVPPGYEPISLLEALNGLR (A) RET(0.99)NS(0.0)DS(0.0)VPPGY(0.0)EPIS(0.0)LLEALNGLR t:Phosphorylated T MGRN1 63873.2 1 5 1708.1 120.05 HUMAN 1 1.9887 10.4197 SKKQPPGSEEAAGEP-p O14617-5;S960-p SKKQPPGSEEAAGEP 0.64684633129603 0.146935899326992 -0.085 0.252666666666667 3.54351232575529 10.9677315985005 -0.085 0.252666666666667 0.442230576863922 0.0800252132556665 -0.828799811769802 2.14949134602298 O14617 AP3D1 O14617.5.S960.p_AP3D1 O14617-5_S960s _1_1_960_960 O14617-5 O14617-5|O14617-2|O14617-4|O14617-3 Isoform 5 of AP-3 complex subunit delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24008.24008.5 20.41 20.41 11.471 7 1 1 0 1005.4997 4943.5041 S960s TMT10 955 (K) KQPPGsEEAAGEPVQNGAPEEEQLPPESSYSLLAENSYVK (M) KQPPGS(0.99)EEAAGEPVQNGAPEEEQLPPES(0.0)S(0.0)Y(0.0)S(0.0)LLAENS(0.0)Y(0.0)VK K:TMT10,s:Phosphorylated S AP3D1 137789.5 1 9 513.1 286.98 HUMAN 1 -3.5435 10.9677 SKKRKHRSPTPKSKR-p Q9UQ35;S231-p SKKRKHRSPTPKSKR 0.0832139716415161 0.0014286003693118 0.447333333333333 0.928 23.0703106753753 46.0147480366617 0.447333333333333 0.928 0.00493138525708746 2.50337088149428e-05 4.5710684796998 13.1982246269131 Q9UQ35 SRRM2 Q9UQ35.S231.p_SRRM2 Q9UQ35_S231s _1_1_231_231 Q9UQ35 Q9UQ35|Q9UQ35-2|Q9UQ35-3|A0A087X1W1 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.2893.2893.3 8.43 8.43 3.649 2 1 1 0 454.2545 1280.7839 S231s TMT10 229 (K) HRsPTPK (S) HRS(0.99)PT(0.0)PK K:TMT10,s:Phosphorylated S SRRM2 300351.7 1 3 2.1 3310.34 HUMAN 1 23.0703 46.0147 SKKRRHKSDSPESDA-p O75400;S883-p SKKRRHKSDSPESDA 0.830680447880338 0.0217325297470457 0.047 0.434666666666667 1.55021421413782 22.7329361607117 0.0469999999999999 0.434666666666667 0.699807477407445 0.00532974442431485 0.406717475985722 4.4866263908969 O75400 PRPF40A O75400.S883.p_PRPF40A O75400_S883sS885sS888s_3_3_883_888 O75400 O75400|O75400-3|O75400-2 Pre-mRNA-processing factor 40 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5325.5533.4 7.68 7.68 99 3 3 3 0 578.9959 2073.0613 S883s S885s S888s Hydrogen 881 (R) HKsDsPEsDAEREK (D) HKS(1.0)DS(1.0)PES(1.0)DAEREK K:TMT10-Lys-Only,s:Phosphorylated S PRPF40A 109088.4 8 14 718.2 237.38 HUMAN 1 1.5502 22.7329 SKKSKGESDDFHMDF-p P11388-2;S1521-p SKKSKGESDDFHMDF 0.788756991728145 0.00332740927341359 -0.0383333333333333 -0.636 1.98672092114007 37.0879477805372 -0.0383333333333333 -0.636 0.632889525278538 0.000195526317951641 -0.505859281066581 -8.89560432625075 P11388 TOP2A P11388.2.S1521.p_TOP2A P11388-2_S1521s _1_1_1521_1521 P11388-2 P11388-4|P11388-3|P11388-2 Isoform 2 of DNA topoisomerase 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17442.17442.3 18.13 18.13 1.118 3 1 1 0 883.7407 2569.2393 S1521s TMT10 1517 (K) SKGEsDDFHMDFDSAVAPR (A) S(0.0)KGES(0.99)DDFHMDFDS(0.0)AVAPR K:TMT10,s:Phosphorylated S TOP2A 178239.3 5 15 71.2 658.36 HUMAN 1 -1.9867 -37.0879 SKKTGPLSAQPSVEK-p Q71F23;S190-p SKKTGPLSAQPSVEK 0.086569904991124 0.138371129389698 0.398 -0.170333333333333 22.7617071163022 11.3154119635722 0.398 -0.170333333333333 0.00529455285729242 0.0738684189478142 4.49831996192934 -2.21043217490563 Q71F23 CENPU Q71F23.S190.p_CENPU Q71F23_S190sS194s_2_2_190_194 Q71F23 Q71F23|Q71F23-3|Q09GN1 Centromere protein U HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19751.19751.4 10.97 10.97 2.697 5 2 2 0 880.2234 3357.9399 S190s S194s TMT10 185 (K) KTGPLsAQPsVEKENLAIESQSK (T) KT(0.0)GPLS(0.99)AQPS(0.99)VEKENLAIES(0.0)QS(0.0)K K:TMT10,s:Phosphorylated S CENPU 47749 1 14 1181.1 168.95 HUMAN 1 22.7617 -11.3154 SKKTSTPSPQPSKRA-p Q8IY18;S12-p SKKTSTPSPQPSKRA 0.301639765350884 0.0954269904939943 0.207333333333333 -0.205 9.76031924016326 13.4948751135904 0.207333333333333 -0.205 0.105673982777662 0.0447211011674589 1.94009819018576 -2.59914343562058 Q8IY18 SMC5 Q8IY18.S12.p_SMC5 Q8IY18_S12s _1_1_12_12 Q8IY18 Q8IY18 Structural maintenance of chromosomes protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6973.6973.3 14.03 14.03 3.325 5 1 1 0 642.3623 1845.1049 S12s TMT10 7 (K) KTSTPsPQPSK (R) KT(0.0)S(0.0)T(0.0)PS(0.99)PQPS(0.0)K K:TMT10,s:Phosphorylated S SMC5 130059.4 10 1 2154.1 95.46 HUMAN 1 9.7603 -13.4949 SKKTTRLSQLLKQEA-p A1IGU5;S251-p SKKTTRLSQLLKQEA 0.0367029378893747 0.0288397521665792 -0.717333333333333 -0.371666666666667 32.8717238626906 20.8521836563953 -0.717333333333333 -0.371666666666667 0.000516211426706418 0.00821829325767505 -7.35572170286262 -4.06026445351173 A1IGU5 ARHGEF37 A1IGU5.S251.p_ARHGEF37 A1IGU5_S251s _1_1_251_251 A1IGU5 A1IGU5 Rho guanine nucleotide exchange factor 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20343.20343.3 7.9 7.9 1.5 3 1 1 0 533.3203 1517.9779 S251s TMT10 247 (K) TTRLsQLLK (Q) T(0.0)T(0.0)RLS(0.99)QLLK K:TMT10,s:Phosphorylated S ARHGEF37 76676.1 1 1 2088.2 98.03 HUMAN 1 -32.8717 -20.8522 SKLANMGSKGKIISG-p Q9P2Q2;S357-p SKLANMGSKGKIISG 0.0506176118125653 0.0159716440659024 -0.517666666666667 -0.468 28.5697521509062 24.8190439771129 -0.517666666666667 -0.468 0.00139003195718796 0.00329682277942803 -6.00849765255915 -4.99191985438807 Q9P2Q2 FRMD4A Q9P2Q2.S357.p_FRMD4A Q9P2Q2_S357s _1_1_357_357 Q9P2Q2 Q9P2Q2 FERM domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13550.13550.2 11.04 5.27 99 1 1 1 0 629.8352 1178.6968 S357s TMT10 352 (K) LANMGsK (G) LANMGS(1.0)K K:TMT10,s:Phosphorylated S FRMD4A 116026.8 1 2 787.1 225.06 HUMAN 1 -28.5698 -24.819 SKLESVISDEGDLQF-p B2RTY4-5;S1113-p SKLESVISDEGDLQF 0.702380338642873 0.303067272618419 -0.0686666666666667 -0.127666666666667 2.8841109587616 6.84538217874612 -0.0686666666666667 -0.127666666666667 0.514741168538691 0.206757742728942 -0.696774005192559 -1.43353278651208 B2RTY4 MYO9A B2RTY4.5.S1113.p_MYO9A B2RTY4-5_S1113s _1_1_1113_1113 B2RTY4-5 B2RTY4-4|B2RTY4-2|H3BRD5|B2RTY4-5|H3BMM1 Isoform 5 of Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26080.26080.4 12.62 12.62 3.418 4 1 1 0 711.6311 2763.5383 S1113s TMT10 1106 (K) SKLESVIsDEGDLQFPSPK (I) S(0.0)KLES(0.0)VIS(0.99)DEGDLQFPS(0.0)PK K:TMT10,s:Phosphorylated S MYO9A 267577.4 1 10 457.1 306.95 HUMAN 1 -2.8841 -6.8454 SKLGSAHSEAENGVE-p Q96HH9;S29-p SKLGSAHSEAENGVE 0.0933084416341688 0.729961018828838 0.418 -0.0733333333333333 21.8875798106914 1.88388306032893 0.418 -0.0733333333333333 0.00647503348888367 0.648054743709023 4.29626891368141 -0.482875854959606 Q96HH9 GRAMD3 Q96HH9.S29.p_GRAMD3 Q96HH9_S29s _1_1_29_29 Q96HH9 Q96HH9|E9PD09 GRAM domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9469.9469.3 19.49 19.49 3.529 2 1 1 0 699.0086 2015.0446 S29s TMT10 24 (K) LGSAHsEAENGVEEK (K) LGS(0.0)AHS(0.99)EAENGVEEK K:TMT10,s:Phosphorylated S GRAMD2B 48324.7 1 1 735.1 235.43 HUMAN 1 21.8876 -1.8839 SKLIRSQSFNNQAFH-p Q6NUP7;S775-p SKLIRSQSFNNQAFH 0.919774718344234 0.100321915560546 0.0156666666666667 -0.191333333333333 0.708924341287985 13.1958718716161 0.0156666666666667 -0.191333333333333 0.849390825741245 0.0479085264079766 0.199182102442595 -2.54500105011152 Q6NUP7 PPP4R4 Q6NUP7.S775.p_PPP4R4 Q6NUP7_S775s _1_1_775_775 Q6NUP7 Q6NUP7 Serine/threonine-protein phosphatase 4 regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11197.11197.4 12.01 12.01 1.486 2 1 1 0 479.9909 1836.9757 S775s TMT10 773 (R) SQsFNNQAFHAK (Y) S(0.0)QS(0.99)FNNQAFHAK K:TMT10,s:Phosphorylated S PPP4R4 100534.2 6 1 3685.1 45.41 HUMAN 1 0.7089 -13.1959 SKLKKTETQEKNPLP-p P62328;T23-p SKLKKTETQEKNPLP 0.0717004271880835 0.00894700841055443 0.771666666666667 -0.489333333333333 24.7218250039782 29.0181473542951 0.771666666666667 -0.489333333333333 0.00337145602652993 0.00125367586326259 4.97366686369821 -6.12956696201715 P62328 TMSB4X P62328.T23.p_TMSB4X P62328_T23t _1_1_23_23 P62328 P62328 Thymosin beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10803.10803.4 8.21 8.21 1.136 3 1 1 0 624.8624 2416.4581 T23t TMT10 20 (K) KTEtQEKNPLPSK (E) KT(0.0)ET(0.99)QEKNPLPS(0.0)K K:TMT10,t:Phosphorylated T TMSB4X 5052.6 4 3 2087.1 98.1 HUMAN 1 24.7218 -29.0181 SKLKRSYSSPDITQA-p P40818;S718-p SKLKRSYSSPDITQA 0.496747780420215 0.970945799147971 0.0933333333333333 0.004 5.59563266979781 0.181880711049456 0.0933333333333333 0.004 0.275699978996539 0.95898525328473 1.21217804068185 0.0538472446510231 P40818 USP8 P40818.S718.p_USP8 P40818_S718s _1_1_718_718 P40818 P40818|P40818-2 Ubiquitin carboxyl-terminal hydrolase 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21487.21487.2 19.74 19.74 1.187 5 1 1 0 1182.0766 2283.1756 S718s TMT10 716 (R) SYsSPDITQAIQEEEK (R) S(0.0)Y(0.0)S(0.99)S(0.0)PDIT(0.0)QAIQEEEK K:TMT10,s:Phosphorylated S USP8 128490.8 13 9 788.1 224.97 HUMAN 1 5.5956 0.1819 SKLLSPYSPQTQETD-p Q9P265;S53-p SKLLSPYSPQTQETD 0.811833558035211 0.0568870376518296 0.0373333333333333 -0.25 1.74065909340429 16.5901760194805 0.0373333333333333 -0.25 0.669782954192915 0.021927160628043 0.450571116087045 -3.17999616259948 Q9P265 DIP2B Q9P265.S53.p_DIP2B Q9P265_S53s _1_1_53_53 Q9P265 Q9P265 Disco-interacting protein 2 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20985.20985.3 15.94 15.94 1.284 6 1 1 0 844.1004 2450.3179 S53s TMT10 48 (K) LLSPYsPQTQETDSAVQK (E) LLS(0.0)PY(0.0)S(0.99)PQT(0.0)QET(0.0)DS(0.0)AVQK K:TMT10,s:Phosphorylated S DIP2B 173713.6 2 3 1010.1 188.94 HUMAN 1 1.7407 -16.5902 SKLLSTYSAEELYQA-p Q9NXL2;S582-p SKLLSTYSAEELYQA 0.301870812532595 0.110972727126059 0.148 0.242 9.7534733680735 12.6041064215846 0.148 0.242 0.105840690179745 0.0549021507376333 1.93891042267581 2.43867813347692 Q9NXL2 ARHGEF38 Q9NXL2.S582.p_ARHGEF38 Q9NXL2_S582s _1_1_582_582 Q9NXL2 Q9NXL2 Rho guanine nucleotide exchange factor 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25816.25816.3 15.9 15.9 2.454 5 1 1 0 718.7095 2074.1472 S582s TMT10 577 (K) LLSTYsAEELYQAK (R) LLS(0.0)T(0.0)Y(0.0)S(0.99)AEELY(0.0)QAK K:TMT10,s:Phosphorylated S ARHGEF38 89988.8 1 4 2438.1 83.38 HUMAN 1 9.7535 12.6041 SKLPHSQSSPTVSST-p Q155Q3;S592-p SKLPHSQSSPTVSST 0.900644796410221 0.968349549397408 -0.0183333333333333 0.00566666666666669 0.890367657802346 0.198164591916716 -0.0183333333333333 0.00566666666666668 0.814635317059295 0.95539626868839 -0.246147617260332 0.058565259647912 Q155Q3 DIXDC1 Q155Q3.S592.p_DIXDC1 Q155Q3_S592s _1_1_592_592 Q155Q3 Q155Q3|Q155Q3-2 Dixin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9103.9103.3 13.33 13.33 1.132 8 1 1 0 752.3759 2175.148 S592s TMT10 587 (K) LPHSQsSPTVSSTCTK (V) LPHS(0.0)QS(0.99)S(0.0)PT(0.0)VS(0.0)S(0.0)T(0.0)CT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DIXDC1 77933.1 1 2 3782.1 43.16 HUMAN 1 -0.8904 0.1982 SKLPLTRSHNNFVAI-p Q9Y478;S108-p SKLPLTRSHNNFVAI 0.367685965345823 0.156037701927593 -0.160333333333333 0.147666666666667 8.06257771079327 10.6092022392205 -0.160333333333333 0.147666666666667 0.156222012751778 0.0869120064338468 -1.64601446865532 2.08687506238247 Q9Y478 PRKAB1 Q9Y478.S108.p_PRKAB1 Q9Y478_S108s _1_1_108_108 Q9Y478 Q9Y478 5'-AMP-activated protein kinase subunit beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21719.21719.4 24.63 24.63 20.714 2 1 1 0 630.8107 2440.2458 S108s Hydrogen 108 (R) sHNNFVAILDLPEGEHQYK (F) S(0.99)HNNFVAILDLPEGEHQY(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S PRKAB1 30552.9 11 3 1669.1 122.33 HUMAN 1 -8.0626 10.6092 SKLQPLPSCEVCATP-p P49795;S72-p SKLQPLPSCEVCATP 0.740933320571624 0.369350115314893 0.0603333333333333 0.087 2.47114458805999 5.73727217468079 0.0603333333333333 0.087 0.566090075691394 0.266853425792984 0.610785151451016 1.2373335587731 P49795 RGS19 P49795.S72.p_RGS19 P49795_S72s _1_1_72_72 P49795 P49795 Regulator of G-protein signaling 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.33182.33182.3 19.3 19.3 1.185 5 1 1 0 1210.2422 3548.7442 S72s TMT10 67 (K) LQPLPsCEVCATPSPEEVQSWAQSFDK (L) LQPLPS(0.99)CEVCAT(0.0)PS(0.0)PEEVQS(0.0)WAQS(0.0)FDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RGS19 25262.8 1 1 3840.1 41.87 HUMAN 1 2.4711 5.7373 SKLQRPPSVDSIIRS-p Q1MSJ5;S901-p SKLQRPPSVDSIIRS 0.828102470990375 0.034922319435251 0.036 -0.287666666666667 1.57363493443861 19.6153029551529 0.036 -0.287666666666667 0.696043699357649 0.0109262140544433 0.412163940421936 -3.79340949916945 Q1MSJ5 CSPP1 Q1MSJ5.S901.p_CSPP1 Q1MSJ5_S901s _1_1_901_901 Q1MSJ5 Q1MSJ5|Q1MSJ5-1|Q1MSJ5-2 Centrosome and spindle pole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18330.18330.3 11.14 11.14 3.494 2 1 1 0 563.98 1609.9587 S901s TMT10 896 (K) LQRPPsVDSIIR (S) LQRPPS(0.99)VDS(0.0)IIR s:Phosphorylated S CSPP1 145804.7 3 5 1677.1 121.74 HUMAN 1 1.5736 -19.6153 SKLSDLDSETRSMVE-p Q9Y266;S281-p SKLSDLDSETRSMVE 0.221740675120778 0.881726598410713 -0.22 -0.015 12.5926130083256 0.76817552823378 -0.22 -0.015 0.0550476393047005 0.837881202218886 -2.43791052278835 -0.214651632718447 Q9Y266 NUDC Q9Y266.S281.p_NUDC Q9Y266_S281s _1_1_281_281 Q9Y266 Q9Y266 Nuclear migration protein nudC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20275.20275.3 10.47 10.47 1.654 4 1 1 0 716.6935 2068.0996 S281s TMT10 276 (K) LSDLDsETRSMVEK (M) LS(0.0)DLDS(0.99)ET(0.0)RS(0.0)MVEK K:TMT10,s:Phosphorylated S NUDC 38299.3 2 8 739.1 234.62 HUMAN 1 -12.5926 -0.7682 SKLSLQESESKRRCR-p Q9NRL2;S1402-p SKLSLQESESKRRCR 0.402711796637755 0.00315537063565764 -0.167 -0.626666666666667 7.2930039940616 37.5425653995639 -0.167 -0.626666666666667 0.18650891713458 0.000176093554555616 -1.51221079964183 -9.07911840128676 Q9NRL2 BAZ1A Q9NRL2.S1402.p_BAZ1A Q9NRL2_S1402s _1_1_1402_1402 Q9NRL2 Q9NRL2|Q9NRL2-2 Bromodomain adjacent to zinc finger domain protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14799.14799.2 12.59 6 2.202 3 1 1 0 779.9111 1478.8466 S1402s TMT10 1397 (K) LSLQEsESK (R) LS(0.0)LQES(0.99)ES(0.0)K K:TMT10,s:Phosphorylated S BAZ1A 180353.8 1 10 567.1 270.71 HUMAN 1 -7.293 -37.5426 SKLSRHGSGADSDYE-p Q9Y2X7;S592-p SKLSRHGSGADSDYE 0.469994578421718 0.314966338701214 0.12 -0.174666666666667 6.05546490563586 6.63145941972776 0.12 -0.174666666666667 0.248001044213783 0.217197117874241 1.29443818520243 -1.39596949903155 Q9Y2X7 GIT1 Q9Y2X7.S592.p_GIT1 Q9Y2X7_S592s _1_1_592_592 Q9Y2X7 Q9Y2X7-3|A0A0C4DGN6|J3QRU8 ARF GTPase-activating protein GIT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16722.16722.4 23.61 21.35 2.089 5 1 1 0 786.1285 3061.5227 S592s TMT10 590 (R) HGsGADSDYENTQSGDPLLGLEGKR (F) HGS(0.99)GADS(0.0)DY(0.0)ENT(0.0)QS(0.0)GDPLLGLEGKR K:TMT10,s:Phosphorylated S GIT1 85081.2 8 30 474.2 301.74 HUMAN 1 6.0555 -6.6315 SKLTKDFSALESQLQ-p P35579;S1304-p SKLTKDFSALESQLQ 0.681659995508636 0.304105265806427 -0.0643333333333334 0.112333333333333 3.12233700634421 6.8276199646251 -0.0643333333333334 0.112333333333333 0.487266213992622 0.207605093024622 -0.745152652960126 1.43041848486244 P35579 MYH9 P35579.S1304.p_MYH9 P35579_S1304s _1_1_1304_1304 P35579 P35579 Myosin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.34765.34765.3 16.73 16.73 3.173 3 1 1 0 934.7747 2722.3369 S1304s TMT10 1302 (K) DFsALESQLQDTQELLQEENR (Q) DFS(0.99)ALES(0.0)QLQDT(0.0)QELLQEENR s:Phosphorylated S MYH9 227783.5 3 30 296.1 379.15 HUMAN 1 -3.1223 6.8276 SKLVLAESPQPKGKN-p A0A1B0GVL4;S1435-p SKLVLAESPQPKGKN 0.308419138780829 0.00758498686582333 -0.147333333333333 -0.561333333333333 9.54833364004964 30.2824826415426 -0.147333333333333 -0.561333333333333 0.110960048015107 0.000937026203383201 -1.90333572630006 -6.50808823134686 A0A1B0GVL4 NotFound A0A1B0GVL4.S1435.p_NotFound A0A1B0GVL4_S1435s _1_1_1435_1435 A0A1B0GVL4 A0A1B0GVL4|P78312|P78312-5|P78312-2|P78312-6|P78312-4 Protein FAM193A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19416.19416.2 14.72 9.36 99 1 1 1 0 810.462 1539.9511 S1435s TMT10 1430 (K) LVLAEsPQPK (G) LVLAES(1.0)PQPK K:TMT10,s:Phosphorylated S FAM193A 168423.2 4 8 1381.1 148.28 HUMAN 1 -9.5483 -30.2825 SKMQQNGYENPTYKF-p P05067;Y757-p SKMQQNGYENPTYKF 0.672358497278125 0.146270680828253 -0.0573333333333333 -0.213 3.22841274656735 10.9968465674338 -0.0573333333333334 -0.213 0.475508982550353 0.0794905209621192 -0.766435666710361 -2.15458585231253 P05067 APP P05067.Y757.p_APP P05067_Y757y _1_1_757_757 P05067 P05067|P05067-9|P05067-8|P05067-11|P05067-7|P05067-6|E9PG40|P05067-5|P05067-4|P05067-3|A0A0A0MRG2|P05067-10 Amyloid-beta A4 protein GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12692.12692.3 19.62 13.8 14.165 3 1 1 0 670.9846 1930.9733 Y757y TMT10 752 (K) MQQNGyENPTYK (F) MQQNGY(0.99)ENPT(0.0)Y(0.0)K K:TMT10,y:Phosphorylated Y APP 87968.7 4 1 176.1 19.62 HUMAN 1 -3.2284 -10.9968 SKMSSPETDEEIEKM-p Q6UWZ7;T390-p SKMSSPETDEEIEKM 0.770066539694405 0.773260212453139 -0.0483333333333333 0.0493333333333334 2.1734053006819 1.54511707327243 -0.0483333333333333 0.0493333333333334 0.606260774426521 0.700629295664811 -0.546870412740195 0.405486661011681 Q6UWZ7 FAM175A Q6UWZ7.T390.p_FAM175A Q6UWZ7_T390t _1_1_390_390 Q6UWZ7 Q6UWZ7|D6REL5|Q6UWZ7-2 BRCA1-A complex subunit Abraxas 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13864.13864.3 11.33 8.28 3.131 3 1 1 0 644.9684 1852.925 T390t TMT10 385 (K) MSSPEtDEEIEK (M) MS(0.0)S(0.0)PET(0.99)DEEIEK K:TMT10,t:Phosphorylated T ABRAXAS1 47061.3 1 3 2650.1 75.21 HUMAN 1 -2.1734 1.5451 SKNKYLHSPESRPVT-p Q8WYB5;S1048-p SKNKYLHSPESRPVT 0.202846697385928 0.0358887394622494 0.282 0.354666666666667 13.4346278146081 19.4536409287417 0.282 0.354666666666667 0.0453458156958073 0.0113405967263248 2.58968743611428 3.75926883375481 Q8WYB5 KAT6B Q8WYB5.S1048.p_KAT6B Q8WYB5_S1048s _1_1_1048_1048 Q8WYB5 Q8WYB5|Q8WYB5-2|Q8WYB5-3 Histone acetyltransferase KAT6B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6074.6074.4 12.31 12.31 4.674 4 1 1 0 484.9929 1856.9816 S1048s TMT10 1045 (K) YLHsPESRPVTGER (G) Y(0.0)LHS(0.99)PES(0.0)RPVT(0.0)GER s:Phosphorylated S KAT6B 234283.8 1 4 903.2 203.52 HUMAN 1 13.4346 19.4536 SKNPQVPSDGGVRLN-p Q9UHF7-2;S204-p SKNPQVPSDGGVRLN 0.958144471433062 0.570145030030526 -0.0103333333333333 0.0723333333333334 0.36085480603454 3.28883992581894 -0.0103333333333333 0.0723333333333334 0.920268420839628 0.468938626873527 -0.10485434058723 0.778377017593688 Q9UHF7 TRPS1 Q9UHF7.2.S204.p_TRPS1 Q9UHF7-2_S204s _1_1_204_204 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3|E5RJ97 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12863.12863.3 12.92 12.92 99 1 1 1 0 673.6979 1939.1125 S204s TMT10 199 (K) NPQVPsDGGVRLNK (S) NPQVPS(1.0)DGGVRLNK K:TMT10,s:Phosphorylated S TRPS1 145246 3 8 14.1 1150.14 HUMAN 1 -0.3609 3.2888 SKNQTEDSLRKELIA-p Q14BN4;S235-p SKNQTEDSLRKELIA 0.492235246826051 0.0158735128847127 -0.0926666666666667 -0.429 5.66921619846824 24.8677549156195 -0.0926666666666667 -0.429 0.271068080321165 0.00326005185759113 -1.22540513480577 -5.00415815328368 Q14BN4 SLMAP Q14BN4.S235.p_SLMAP Q14BN4_S235s _1_1_235_235 Q14BN4 Q14BN4|Q14BN4-3|Q14BN4-2|Q14BN4-6|Q14BN4-7 Sarcolemmal membrane-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6032.6032.3 9.56 9.56 3.102 2 1 1 0 543.6193 1548.8746 S235s TMT10 230 (K) NQTEDsLRK (E) NQT(0.0)EDS(0.99)LRK K:TMT10,s:Phosphorylated S SLMAP 96052.4 1 2 2581.1 77.77 HUMAN 1 -5.6692 -24.8678 SKNSCQDSEADEETS-p Q86W56;S316-p SKNSCQDSEADEETS 0.719529968451986 0.00504012507895614 -0.0633333333333333 0.536 2.69884126215998 33.4950718275325 -0.0633333333333334 0.536 0.537175100536428 0.000447190755684152 -0.658550435294421 7.55628444437378 Q86W56 BPHL Q86W56.S316.p_BPHL Q86W56_S316s _1_1_316_316 Q86W56 Q86W56|Q86W56-2|Q86W56-3 Poly(ADP-ribose) glycohydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9398.9398.4 29.67 29.67 3.306 9 1 1 0 1032.6881 4047.7634 S316s TMT10 311 (K) NSCQDsEADEETSPGFDEQEDGSSSQTANKPSR (F) NS(0.0)CQDS(0.99)EADEET(0.0)S(0.0)PGFDEQEDGS(0.0)S(0.0)S(0.0)QT(0.0)ANKPS(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PARG 112534.8 2 8 855.1 211.13 HUMAN 1 -2.6988 33.4951 SKNSKLLSTSAKRIQ-p P51965;S46-p SKNSKLLSTSAKRIQ 0.0622808715508477 0.191528226431223 -0.409666666666667 -0.144 26.235940218091 9.44048504198763 -0.409666666666667 -0.144 0.00237906319415777 0.113750023696366 -5.36376834443977 -1.88393047508256 P51965 UBE2E1 P51965.S46.p_UBE2E1 P51965_S46s _1_1_46_46 P51965 P51965 Ubiquitin-conjugating enzyme E2 E1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15895.15895.2 8.87 2.81 1.115 3 1 1 0 629.3644 1177.7556 S46s TMT10 44 (K) LLsTSAK (R) LLS(0.99)T(0.0)S(0.0)AK K:TMT10,s:Phosphorylated S UBE2E1 21689.1 1 3 3831.1 42.11 HUMAN 1 -26.2359 -9.4405 SKNTLKDSLFKNGNS-p Q9P0U3;S233-p SKNTLKDSLFKNGNS 0.659992016473591 0.140510220551839 -0.184333333333333 -0.214333333333333 3.38144852220945 11.2311191892071 -0.184333333333333 -0.214333333333333 0.459044879966548 0.0753161446879892 -0.796878826366777 -2.19563600136948 Q9P0U3 SENP1 Q9P0U3.S233.p_SENP1 Q9P0U3_S233s _1_1_233_233 Q9P0U3 Q9P0U3|Q9P0U3-2 Sentrin-specific protease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18223.18223.3 9.6 9.6 9.603 2 1 1 0 611.688 1753.0827 S233s TMT10 228 (K) NTLKDsLFK (N) NT(0.0)LKDS(0.99)LFK K:TMT10,s:Phosphorylated S SENP1 74049.8 1 10 1420.1 144.33 HUMAN 1 -3.3814 -11.2311 SKPDLESSLESLVFD-p Q99549-2;S189-p SKPDLESSLESLVFD 0.982795908449026 0.828892841143029 -0.00333333333333334 0.022 0.149731415990063 1.1389111612723 -0.00333333333333334 0.022 0.966110625049925 0.769323296524767 -0.0444885057644432 0.308337852058058 Q99549 MPHOSPH8 Q99549.2.S189.p_MPHOSPH8 Q99549-2_S189sS192s_2_2_189_192 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35705.35909.3 9.18 5.27 1.102 4 2 2 0 851.7576 2393.3328 S189s S192s TMT10 182 (K) SKPDLESsLEsLVFDLR (T) S(0.0)KPDLES(0.0)S(0.99)LES(0.99)LVFDLR K:TMT10,s:Phosphorylated S MPHOSPH8 98148.4 4 20 242.1 413.34 HUMAN 1 -0.1497 1.1389 SKPFSELSDSDLEEK-p Q6NUN7-2;S214-p SKPFSELSDSDLEEK 0.689103452022098 0.763553479953782 -0.06 -0.0326666666666667 3.0353154064593 1.61893564033025 -0.06 -0.0326666666666667 0.497128268463179 0.688821090465872 -0.727576172209908 -0.422609400307071 Q6NUN7 C11orf63 Q6NUN7.2.S214.p_C11orf63 Q6NUN7-2_S214sS216s_2_2_214_216 Q6NUN7-2 Q6NUN7|Q6NUN7-2 Isoform 2 of Jhy protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21081.21081.3 7.49 7.49 7.488 4 2 2 0 853.4155 2398.2956 S214s S216s TMT10 207 (R) SKPFSELsDsDLEEK (S) S(0.0)KPFS(0.0)ELS(0.99)DS(0.99)DLEEK K:TMT10,s:Phosphorylated S JHY 34827.9 1 4 4631.1 28.6 HUMAN 1 -3.0353 -1.6189 SKPGAVSTPVKHADD-p G3V1L9;T354-p SKPGAVSTPVKHADD 0.373228695696441 0.00177043297676807 -0.187 -1.13266666666667 7.93475659127667 43.4456162188541 -0.187 -1.13266666666667 0.16088825482891 4.52312279355046e-05 -1.62384054122673 -11.7952539960968 G3V1L9 TJP1 G3V1L9.T354.p_TJP1 G3V1L9_T354t _1_1_354_354 G3V1L9 G3V1L9|Q07157|G5E9E7|A0A087X0K9|Q07157-2 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13414.13414.3 13.32 13.32 1.13 3 1 1 0 651.0583 1871.1933 T354t TMT10 346 (R) ISKPGAVStPVK (H) IS(0.0)KPGAVS(0.0)T(0.99)PVK K:TMT10,t:Phosphorylated T TJP1 197797.8 6 46 41.2 827.72 HUMAN 1 -7.9348 -43.4456 SKPGSPGSVIPAQAH-p Q8IZD2;S1362-p SKPGSPGSVIPAQAH 0.343568239873255 0.111211777557805 -0.166 0.17 8.61737739444464 12.590014598543 -0.166 0.17 0.137487197828063 0.0550805844902176 -1.7421291851731 2.43615896610727 Q8IZD2 KMT2E Q8IZD2.S1362.p_KMT2E Q8IZD2_S1362s _1_1_1362_1362 Q8IZD2 Q8IZD2|Q8IZD2-7|Q8IZD2-2|Q8IZD2-5|Q8IZD2-6 Histone-lysine N-methyltransferase 2E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13423.13423.4 14.8 14.8 1.17 3 1 1 0 629.8468 2436.4 S1362s TMT10 1354 (K) MSKPGSPGsVIPAQAHGK (I) MS(0.0)KPGS(0.0)PGS(0.99)VIPAQAHGK K:TMT10,s:Phosphorylated S KMT2E 207015.2 3 11 544.1 275.86 HUMAN 1 -8.6174 12.59 SKPIKAYSTENYSLE-p Q6ZV73;S692-p SKPIKAYSTENYSLE 0.481005429235313 0.0239391331585884 -0.125 -0.372 5.85147981978263 22.0958596624966 -0.125 -0.372 0.259927373287084 0.00617183111729389 -1.258060410774 -4.33927000704319 Q6ZV73 FGD6 Q6ZV73.S692.p_FGD6 Q6ZV73_S692s _1_1_692_692 Q6ZV73 Q6ZV73|Q6ZV73-2|F8VY01 FYVE, RhoGEF and PH domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14407.14407.2 15.83 15.83 1.133 6 1 1 0 1029.4951 1978.017 S692s TMT10 690 (K) AYsTENYSLESQK (K) AY(0.0)S(0.99)T(0.0)ENY(0.0)S(0.0)LES(0.0)QK K:TMT10,s:Phosphorylated S FGD6 162696.3 3 10 630.1 257.05 HUMAN 1 -5.8515 -22.0959 SKPKANVSPQRQNRM-p A0A1B0GUI1;S1241-p SKPKANVSPQRQNRM 0.326502819643871 0.0931066747813488 0.158 -0.223666666666667 9.10323304878476 13.6362395388661 0.158 -0.223666666666667 0.122935325404179 0.0432888497506026 1.8262346257109 -2.62484551568088 A0A1B0GUI1 NotFound A0A1B0GUI1.S1241.p_NotFound A0A1B0GUI1_S1241s _1_1_1241_1241 A0A1B0GUI1 A0A1B0GUI1 Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4441.4441.2 8.89 8.89 99 1 1 1 0 540.7743 1000.5737 S1241s TMT10 1238 (K) ANVsPQR (Q) ANVS(1.0)PQR s:Phosphorylated S RALGAPA1 282518.3 1 1 317.3 366.49 HUMAN 1 9.1032 -13.6362 SKPPAQLSPSVPKRP-p P18887;S266-p SKPPAQLSPSVPKRP 0.292579056536687 0.0337379104235365 -0.224333333333333 -0.271333333333333 10.0695230857714 19.8414941758173 -0.224333333333333 -0.271333333333333 0.0984119169456407 0.0103717151899232 -1.9937916323683 -3.84145728955921 P18887 XRCC1 P18887.S266.p_XRCC1 P18887_S266s _1_1_266_266 P18887 P18887|F5H8D7 DNA repair protein XRCC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11531.11531.5 14.01 14.01 3.183 4 1 1 0 583.1534 2831.7641 S266s TMT10 257 (K) TPSKPPAQLsPSVPKRPK (L) T(0.0)PS(0.0)KPPAQLS(0.99)PS(0.0)VPKRPK K:TMT10,s:Phosphorylated S XRCC1 69817.6 9 6 433.1 315.31 HUMAN 1 -10.0695 -19.8415 SKPPYTDYVSTRWYR-p Q9UPZ9;Y159-p SKPPYTDYVSTRWYR 0.62753280718401 0.089337815622274 0.104333333333333 -0.432 3.76154378555596 13.879748522798 0.104333333333333 -0.432 0.420577099368589 0.0409284358558732 0.871264938111991 -2.66928197073928 Q9UPZ9 ICK Q9UPZ9.Y159.p_ICK Q9UPZ9_Y159y _1_1_159_159 Q9UPZ9 Q9UPZ9|Q9UPZ9-2 Serine/threonine-protein kinase ICK GG20160819_MSz_CCLE_T4D7_pY_Injection_02.12207.12348.3 17.5 17.5 2.149 6 1 1 0 651.3355 1872.0267 Y159y TMT10 152 (R) SKPPYTDyVSTR (W) S(0.0)KPPY(0.0)T(0.0)DY(0.99)VS(0.0)T(0.0)R K:TMT10,y:Phosphorylated Y ICK 71767.8 2 1 205.1 17.5 HUMAN 1 3.7615 -13.8797 SKPSGNDSCELRNLK-p P33981;S321-p SKPSGNDSCELRNLK 0.79813572883131 0.0497997777102317 -0.055 -0.479 1.88995702877685 17.4200252806512 -0.055 -0.479 0.647149018926262 0.0181132954868555 -0.484291933317779 -3.34319920928086 P33981 TTK P33981.S321.p_TTK P33981_S321s _1_1_321_321 P33981 P33981|P33981-2 Dual specificity protein kinase TTK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16601.16601.3 10.87 10.87 1.191 3 1 1 0 823.4149 2388.2593 S321s TMT10 308 (R) DLVVPGSKPSGNDsCELR (N) DLVVPGS(0.0)KPS(0.0)GNDS(0.99)CELR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TTK 98040.5 1 7 1204.1 166.9 HUMAN 1 -1.89 -17.42 SKPVDSDSDDDPLEA-p Q86XP3;S111-p SKPVDSDSDDDPLEA 0.741409981555911 0.104047407974328 -0.0456666666666667 0.295 2.46622330406091 12.982983038091 -0.0456666666666667 0.295 0.566731914163702 0.0503154888119229 -0.609742588271569 2.5066278722677 Q86XP3 DDX42 Q86XP3.S111.p_DDX42 Q86XP3_S111s _1_1_111_111 Q86XP3 Q86XP3|J3KTK9 ATP-dependent RNA helicase DDX42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32145.32725.4 23.94 20.88 1.136 3 1 1 0 979.702 3835.8121 S111s TMT10 100 (R) QQFHSKPVDSDsDDDPLEAFMAEVEDQAAR (D) QQFHS(0.0)KPVDS(0.0)DS(0.99)DDDPLEAFMAEVEDQAAR K:TMT10,s:Phosphorylated S DDX42 103258.6 2 2 914.1 200.89 HUMAN 1 -2.4662 12.983 SKPVFSESLSD____-p O60220;S94-p SKPVFSESLSD____ 0.9421991389452 0.00722776447877584 0.011 0.499333333333333 0.50850998810756 30.6339607906149 0.0108432212078809 0.499333333333334 0.889506244357053 0.000864179422677722 0.145601283658346 6.61657001709214 O60220 TIMM8A O60220.S94.p_TIMM8A O60220_S94s _1_1_94_94 O60220 O60220 Mitochondrial import inner membrane translocase subunit Tim8 A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17922.17922.3 10.19 10.19 1.272 4 1 1 0 578.6303 1653.91 S94s TMT10 87 (K) SKPVFSEsLSD (-) S(0.0)KPVFS(0.0)ES(0.99)LS(0.0)D K:TMT10,s:Phosphorylated S TIMM8A 11226.4 5 4 3648.1 46.12 HUMAN 1 0.5085 30.634 SKPYISNTLPSDAPK-p Q53SF7;T322-p SKPYISNTLPSDAPK 0.684799668184202 0.43910939708751 0.061 0.106 3.08490510728279 4.76239022758279 0.061 0.106 0.49148411893898 0.334011159627487 0.737605347542035 1.06012364191427 Q53SF7 COBLL1 Q53SF7.T322.p_COBLL1 Q53SF7_T322t _1_1_322_322 Q53SF7 A0A0D9SG04|Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4|A0A0B4J1Z0 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16778.16778.5 15.61 15.61 2.288 7 1 1 0 632.3619 3077.8017 T322t TMT10 311 (R) SNTISKPYISNtLPSDAPKK (R) S(0.0)NT(0.0)IS(0.0)KPY(0.0)IS(0.0)NT(0.99)LPS(0.0)DAPKK K:TMT10,t:Phosphorylated T COBLL1 132526.1 4 8 163.1 494.83 HUMAN 1 3.0849 4.7624 SKQARANSFVGTAQY-p O15530;S241-p SKQARANSFVGTAQY 0.813072191749547 0.505881687739408 0.0343333333333333 0.068 1.72769043353272 3.96574491922992 0.0343333333333333 0.068 0.671786011958181 0.401259666700145 0.447615464173714 0.910422805311881 O15530 PDPK1 O15530.S241.p_PDPK1 O15530_S241s _1_1_241_241 O15530 O15530|E9PER6|O15530-2|O15530-5|O15530-4|Q6A1A2 3-phosphoinositide-dependent protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28175.28843.3 21.64 21.64 3.836 5 1 1 0 864.7832 2512.3699 S241s TMT10 239 (R) ANsFVGTAQYVSPELLTEK (S) ANS(0.99)FVGT(0.0)AQY(0.0)VS(0.0)PELLT(0.0)EK K:TMT10,s:Phosphorylated S PDPK1 63664.2 22 4 2897.1 66.6 HUMAN 1 1.7277 3.9657 SKQDSRGSPLLGPVV-p P49454;S2996-p SKQDSRGSPLLGPVV 0.921459930847429 0.00379001554573942 0.0146666666666667 -0.647666666666667 0.697649018544789 35.8977326010765 0.0146666666666667 -0.647666666666667 0.851598912455118 0.000257173810567006 0.196216926960877 -8.43064460769689 P49454 CENPF P49454.S2996.p_CENPF P49454_S2996s _1_1_2996_2996 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27516.27516.3 15.1 15.1 4.372 4 1 1 0 779.7591 2257.3005 S2996s Hydrogen 2995 (R) GsPLLGPVVPGPSPIPSVTEK (R) GS(0.99)PLLGPVVPGPS(0.0)PIPS(0.0)VT(0.0)EK K:TMT10-Lys-Only,s:Phosphorylated S CENPF 371067.2 7 26 47.1 771.73 HUMAN 1 0.6976 -35.8977 SKQETELSPEMISSG-p K7ER00;S233-p SKQETELSPEMISSG 0.707522429944391 0.825345818182737 0.0593333333333333 -0.0246666666666666 2.82365462848424 1.16789246222266 0.0593333333333333 -0.0246666666666666 0.521956772656629 0.764206546620655 0.684361174342315 -0.315446179542424 K7ER00 NotFound K7ER00.S233.p_NotFound K7ER00_S233s _1_1_233_233 K7ER00 K7ER00|Q9Y285|K7ER16 Phenylalanine--tRNA ligase alpha subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24023.24023.4 22.26 22.26 5.077 10 1 1 0 835.9103 3260.6509 S233s TMT10 218 (K) GSAFSTSISKQETELsPEMISSGSWR (D) GS(0.0)AFS(0.0)T(0.0)S(0.0)IS(0.0)KQET(0.0)ELS(0.99)PEMIS(0.0)S(0.0)GS(0.0)WR K:TMT10,s:Phosphorylated S FARSA 62451.2 2 2 2453.1 82.83 HUMAN 1 2.8237 -1.1679 SKQGGRCSPVPGLSS-p Q9H6U6;S480-p SKQGGRCSPVPGLSS 0.0576036189507777 0.00505966130244211 0.527666666666667 0.681 27.0503588623538 33.4559208056245 0.527666666666667 0.681 0.00197225975936711 0.000451240341717651 5.58252555483964 7.54270948815457 Q9H6U6 BCAS3 Q9H6U6.S480.p_BCAS3 Q9H6U6_S480s _1_1_480_480 Q9H6U6 Q9H6U6-3|Q9H6U6-7|Q9H6U6-2|K7ESE9|Q9H6U6-6 Breast carcinoma-amplified sequence 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12483.12483.4 11.68 11.68 1.913 6 1 1 0 697.6055 2707.435 S480s TMT10 475 (K) QGGRCsPVPGLSSSPSGSPLHGK (L) QGGRCS(0.99)PVPGLS(0.0)S(0.0)S(0.0)PS(0.0)GS(0.0)PLHGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BCAS3 102547.1 1 3 847.1 212.9 HUMAN 1 27.0504 33.4559 SKQRLKISLGKVGVK-p P46013;S2002-p SKQRLKISLGKVGVK 0.333753980172976 0.0023076715634852 -0.227333333333333 -1.06866666666667 8.89581553679079 40.6380200722821 -0.227333333333333 -1.06866666666667 0.128949138894228 8.63372065243328e-05 -1.79032808327744 -10.4220935243373 P46013 MKI67 P46013.S2002.p_MKI67 P46013_S2002s _1_1_2002_2002 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19830.19830.3 10.06 10.06 99 1 1 1 0 509.3281 1446.0022 S2002s TMT10 1999 (R) LKIsLGK (V) LKIS(1.0)LGK K:TMT10,s:Phosphorylated S MKI67 360912.4 1 67 5.1 1918.46 HUMAN 1 -8.8958 -40.638 SKQRTNPSPTNPFSS-p P49757;S634-p SKQRTNPSPTNPFSS 0.124010758438145 0.00274524440290629 0.273333333333333 0.706 18.8455348210276 38.7994887383224 0.273333333333333 0.706 0.0130450731246518 0.000131841193597481 3.635452924326 9.60428270360473 P49757 NUMB P49757.S634.p_NUMB P49757_S634s _1_1_634_634 P49757 P49757|P49757-3|P49757-2|P49757-4|G3V3Z8|P49757-5|P49757-6|P49757-7|P49757-8|P49757-9 Protein numb homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18116.18116.2 14.6 14.6 1.629 5 1 1 0 971.4606 1861.9493 S634s Hydrogen 631 (R) TNPsPTNPFSSDLQK (T) T(0.0)NPS(0.99)PT(0.0)NPFS(0.0)S(0.0)DLQK K:TMT10-Lys-Only,s:Phosphorylated S NUMB 71487.2 13 9 538.1 277.23 HUMAN 1 18.8455 38.7995 SKQSCELSPSKLEKN-p P20936;S831-p SKQSCELSPSKLEKN 0.244663424257806 0.0115534666197557 -0.453666666666667 0.596 11.6985422541644 27.1110485754744 -0.453666666666667 0.596 0.067630994640053 0.00194489044391825 -2.27897571048206 5.5913291171598 P20936 RASA1 P20936.S831.p_RASA1 P20936_S831s_1_1_831_831 P20936 P20936|E9PGC0|P20936-4|P20936-2 Ras GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17363.17363.3 11.88 11.88 3.323 3 1 1 0 642.9936 1864.025 Q826q S831s Hydrogen 826 (K) qSCELsPSKLEK (N) Q(1.0)S(0.0)CELS(0.99)PS(0.0)KLEK C:Carbamidomethylation,K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S RASA1 117314 3 2 4336.1 33.28 HUMAN 1 -11.6985 27.111 SKQSLFDSCKMSHGG-p Q8N697;S298-p SKQSLFDSCKMSHGG 0.117289050573617 0.00298393706599723 -0.442666666666667 0.822 19.3624110932588 37.9379656441301 -0.442666666666667 0.822 0.0115813421078377 0.000160769416521709 -3.74343329783976 9.24147099262608 Q8N697 SLC15A4 Q8N697.S298.p_SLC15A4 Q8N697_S298s _1_1_298_298 Q8N697 Q8N697 Solute carrier family 15 member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16423.16423.2 11.27 11.27 3.229 2 1 1 0 761.8702 1442.7714 S298s TMT10 293 (K) QSLFDsCK (M) QS(0.0)LFDS(0.99)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLC15A4 62774.1 3 2 4454.1 31.16 HUMAN 1 -19.3624 37.938 SKQVSSVSPCEPGTS-p Q9UNA4;S598-p SKQVSSVSPCEPGTS 0.44321391319195 0.114269099239299 -0.125666666666667 0.188 6.51368919778825 12.4253943873965 -0.125666666666667 0.188 0.223167567770108 0.0572085000651478 -1.37558867960335 2.40677171311623 Q9UNA4 POLI Q9UNA4.S598.p_POLI Q9UNA4_S598s_1_1_598_598 Q9UNA4 Q9UNA4|J3KQ09|J3KSW2 DNA polymerase iota HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16489.16489.3 15.1 15.1 1.165 13 1 1 0 1117.8364 3270.5295 S598s N608n TMT10 593 (K) QVSSVsPCEPGTSGFnSSSSSYMSSQK (D) QVS(0.0)S(0.0)VS(0.99)PCEPGT(0.0)S(0.0)GFN(1.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)Y(0.0)MS(0.0)S(0.0)QK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated POLI 83803.3 1 3 4111.1 37.39 HUMAN 1 -6.5137 12.4254 SKRAFKQSPPAVPAL-p O15350;S333-p SKRAFKQSPPAVPAL 0.612310168463098 0.0304698237240543 -0.0753333333333333 -0.436666666666667 3.94941516378344 20.4917557332723 -0.0753333333333333 -0.436666666666667 0.402771269268669 0.0089294441785831 -0.907447859297848 -3.98144719422528 O15350 TP73 O15350.S333.p_TP73 O15350_S333s _1_1_333_333 O15350 O15350|O15350-8|O15350-11|O15350-5|O15350-13|O15350-6|O15350-2|O15350-3|O15350-9|O15350-10 Tumor protein p73 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17186.17186.4 18.07 15.5 99 1 1 1 0 634.1281 2453.5211 S333s Hydrogen 329 (R) AFKQsPPAVPALGAGVKK (R) AFKQS(1.0)PPAVPALGAGVKK K:TMT10-Lys-Only,s:Phosphorylated S TP73 70249.7 6 2 2112.1 97.19 HUMAN 1 -3.9494 -20.4918 SKRAGPLTPPKPPRR-p Q8TDM6;T1011-p SKRAGPLTPPKPPRR 0.782152828295493 0.992869511264831 0.0453333333333333 0.00100000000000002 2.04876182377746 0.0446633554604064 0.0453333333333333 0.00100000000000002 0.623912688017003 0.989768583074416 0.51957381881626 0.0134253680525401 Q8TDM6 DLG5 Q8TDM6.T1011.p_DLG5 Q8TDM6_T1011t _1_1_1011_1011 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9141.9348.3 14.66 14.66 99 1 1 1 0 480.6045 1359.831 T1011t Hydrogen 1007 (R) AGPLtPPKPPR (R) AGPLT(1.0)PPKPPR K:TMT10-Lys-Only,t:Phosphorylated T DLG5 215575.4 26 23 34.1 890.58 HUMAN 1 2.0488 0.0447 SKRARLQSPATKVKE-p O60437;S830-p SKRARLQSPATKVKE 0.586827715306576 0.105376889148903 0.114666666666667 -0.241 4.25916357964528 12.9121728679429 0.114666666666667 -0.241 0.375045226339618 0.0511425894233845 0.966355993433554 -2.49389566120075 O60437 PPL O60437.S830.p_PPL O60437_S830s _1_1_830_830 O60437 O60437|K7EKI8 Periplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10241.10241.2 9.47 2.11 2.473 2 1 1 0 641.8624 1202.7509 S830s TMT10 828 (R) LQsPATK (V) LQS(0.99)PAT(0.0)K K:TMT10,s:Phosphorylated S PPL 205313.7 1 3 2268.1 90.52 HUMAN 1 4.2592 -12.9122 SKRHDSDTFPELKLT-p P38398;T696-p SKRHDSDTFPELKLT 0.0768119094193664 0.00615440935818188 -0.356333333333333 -0.874666666666667 23.8713469784827 31.8604383895912 -0.356333333333333 -0.874666666666667 0.00410076896575595 0.000651562620098783 -4.76348678903126 -7.00673057389761 P38398 BRCA1 P38398.T696.p_BRCA1 P38398_T696t _1_1_696_696 P38398 P38398-7|P38398-4 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12014.12014.4 9.72 9.72 1.138 2 1 1 0 471.4926 1802.9801 T696t TMT10 691 (K) RHDSDtFPELK (L) RHDS(0.0)DT(0.99)FPELK K:TMT10,t:Phosphorylated T BRCA1 210227.6 2 9 106.1 588.91 HUMAN 1 -23.8713 -31.8604 SKRKGHEYTNIKYSL-p Q06124;Y546-p SKRKGHEYTNIKYSL 0.722639639573387 0.476358679283284 0.0736666666666666 0.0863333333333334 2.66947085238436 4.29545631467121 0.0736666666666666 0.0863333333333334 0.540820212867039 0.371924140914465 0.652439592497457 0.973027718378987 Q06124 PTPN11 Q06124.Y546.p_PTPN11 Q06124_Y546y _1_1_546_546 Q06124 Q06124|Q06124-2 Tyrosine-protein phosphatase non-receptor type 11 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.7963.7963.2 17.43 9.84 3.008 2 1 1 0 750.3879 1419.7996 Y546y TMT10 543 (K) GHEyTNIK (Y) GHEY(0.99)T(0.0)NIK K:TMT10,y:Phosphorylated Y PTPN11 69005.6 8 2 19.1 80.27 HUMAN 1 2.6695 4.2955 SKRNLRKSREDLSAQ-p G3V1L9;S617-p SKRNLRKSREDLSAQ 0.540902757630975 0.0149918966091793 0.113 -0.479333333333333 4.9245618025822 25.2460961505044 0.113 -0.479333333333333 0.321768717671955 0.00298806736960283 1.09021534975376 -5.09992943065403 G3V1L9 TJP1 G3V1L9.S617.p_TJP1 G3V1L9_S617s _1_1_617_617 G3V1L9 G3V1L9|Q07157|G5E9E7|A0A087X0K9|Q07157-2 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14631.14631.4 15.88 9.52 2.246 4 1 1 0 690.8583 2680.4459 S617s TMT10 617 (K) sREDLSAQPVQTKFPAYER (V) S(0.99)REDLS(0.0)AQPVQT(0.0)KFPAY(0.0)ER K:TMT10,s:Phosphorylated S TJP1 197797.8 19 49 41.2 827.72 HUMAN 1 4.9246 -25.2461 SKRRRATSPSSSVSG-p Q86U86;S10-p SKRRRATSPSSSVSG 0.194933326368064 0.0226193350033276 0.243 0.316666666666667 13.8527555573127 22.4728755960908 0.243 0.316666666666667 0.0411836130061715 0.00565864488849116 2.66592377494323 4.42609900862849 Q86U86 PBRM1 Q86U86.S10.p_PBRM1 Q86U86_S10s _1_1_10_10 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-9|Q86U86-3|Q86U86-7|Q86U86-4|Q86U86-5|Q86U86-6 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9474.9474.3 20.17 20.17 1.118 10 1 1 0 960.7613 2800.2972 S10s TMT10 8 (R) ATsPSSSVSGDFDDGHHSVSTPGPSR (K) AT(0.0)S(0.99)PS(0.0)S(0.0)S(0.0)VS(0.0)GDFDDGHHS(0.0)VS(0.0)T(0.0)PGPS(0.0)R s:Phosphorylated S PBRM1 194199.5 3 1 194.1 462.54 HUMAN 1 13.8528 22.4729 SKRRRMGSGDSSRSC-p S5FZ81;S50-p SKRRRMGSGDSSRSC 0.178039570484092 0.26347109371465 0.782333333333333 0.156666666666667 14.8142566906376 7.63218785400219 0.782333333333333 0.156666666666667 0.0330045891522399 0.172496868214194 2.84368691219888 1.57080810111083 S5FZ81 NotFound S5FZ81.S50.p_NotFound S5FZ81_S50s _1_1_50_50 S5FZ81 Q8WUB8-2|S5FZ81 PHD finger protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3254.3254.3 8.05 2.87 3.718 3 1 1 0 421.1903 1181.5894 S50s TMT10 47 (R) RMGsGDSSR (S) RMGS(0.99)GDS(0.0)S(0.0)R s:Phosphorylated S PHF10 42782.4 2 3 1372.1 149.1 HUMAN 1 14.8143 7.6322 SKRSLSRSPLPRKSM-p Q9NYV4-3;S345-p SKRSLSRSPLPRKSM 0.143638422086766 0.170111781453783 0.651666666666667 -0.234333333333333 17.218039483585 10.1140140609141 0.651666666666667 -0.234333333333333 0.0189756233608457 0.0974088898732582 3.30570367058565 -2.0007062630781 Q9NYV4 CDK12 Q9NYV4.3.S345.p_CDK12 Q9NYV4-3_S345s _1_1_345_345 Q9NYV4-3 Q9NYV4-3 Isoform 3 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7958.7958.3 9.46 9.46 1.273 3 1 1 0 441.2439 1241.7527 S345s TMT10 341 (R) SLSRsPLPR (K) S(0.0)LS(0.0)RS(0.99)PLPR s:Phosphorylated S CDK12 142131.4 2 50 59.3 708.76 HUMAN 1 17.218 -10.114 SKRTGVQTFRRDHDR-p P53621-2;T286-p SKRTGVQTFRRDHDR 0.185110745098635 0.0887848698666244 0.286666666666667 -0.331 14.4126042847012 13.9183394985861 0.286666666666667 -0.331 0.036202584136301 0.0405663609083054 2.76899330849557 -2.67634355977575 P53621 COPA P53621.2.T286.p_COPA P53621-2_T286t _1_1_286_286 P53621-2 P53621-2 Isoform 2 of Coatomer subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5514.5514.3 8.45 8.45 8.451 2 1 1 0 425.2263 1193.6952 T286t TMT10 282 (R) TGVQtFRR (D) T(0.0)GVQT(0.99)FRR t:Phosphorylated T COPA 140918.9 1 3 545.1 275.81 HUMAN 1 14.4126 -13.9183 SKRVRTNSMGSATGP-p O15014;S467-p SKRVRTNSMGSATGP 0.0147628603234759 0.00105578872948118 -0.940666666666667 -1.196 43.3164974943261 50.6555032472814 -0.940666666666667 -1.196 4.65961731655874e-05 8.59903418113905e-06 -11.7587488910137 -16.1434740416177 O15014 ZNF609 O15014.S467.p_ZNF609 O15014_S467s _1_1_467_467 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20255.20255.3 17.84 13.8 2.177 6 1 1 0 956.1652 2786.5123 S467s TMT10 465 (R) TNsMGSATGPLPGTKVEPTVLDR (N) T(0.0)NS(0.99)MGS(0.0)AT(0.0)GPLPGT(0.0)KVEPT(0.0)VLDR K:TMT10,s:Phosphorylated S ZNF609 152443.5 9 10 63.1 699.07 HUMAN 1 -43.3165 -50.6555 SKSALHSSVPKSTND-p Q12830;S1382-p SKSALHSSVPKSTND 0.268964236629914 0.048830958054751 0.602333333333333 -0.255333333333333 10.8139440464722 17.5397126604375 0.602333333333333 -0.255333333333333 0.0829097480423768 0.0176209262679573 2.12354484379034 -3.36703554619212 Q12830 BPTF Q12830.S1382.p_BPTF Q12830_S1382s _1_1_1382_1382 Q12830 Q12830|Q12830-2|Q12830-4 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8624.8624.3 8.08 8.08 1.431 3 1 1 0 488.6055 1383.836 S1382s TMT10 1377 (K) SALHSsVPK (S) S(0.0)ALHS(0.0)S(0.99)VPK K:TMT10,s:Phosphorylated S BPTF 340995.1 1 14 94.1 610.41 HUMAN 1 10.8139 -17.5397 SKSASAKSIDSKVAD-p Q5SW79;S138-p SKSASAKSIDSKVAD 0.104117071824167 0.00370753114313693 0.535333333333333 -0.789666666666667 20.7367901721758 36.0725955772161 0.535333333333333 -0.789666666666667 0.00843958288588042 0.000247024735118491 4.03888815047293 -8.4975813579698 Q5SW79 CEP170 Q5SW79.S138.p_CEP170 Q5SW79_S138s _1_1_138_138 Q5SW79 Q5SW79|Q5SW79-3|Q5SW79-2 Centrosomal protein of 170 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8113.8113.3 11.89 11.89 1.234 4 1 1 0 587.6639 1681.0099 S138s TMT10 133 (K) SASAKsIDSK (V) S(0.0)AS(0.0)AKS(0.99)IDS(0.0)K K:TMT10,s:Phosphorylated S CEP170 175689.3 2 4 128.1 537.52 HUMAN 1 20.7368 -36.0726 SKSASNKSPLVLEAN-p Q92560;S292-p SKSASNKSPLVLEAN 0.824074812382964 0.26681713065269 0.0323333333333333 0.137 1.62081195347668 7.55562649283961 0.0323333333333333 0.137 0.688523558498566 0.175564761444491 0.42308856207365 1.55749903930433 Q92560 BAP1 Q92560.S292.p_BAP1 Q92560_S292s _1_1_292_292 Q92560 Q92560|F8W6N3 Ubiquitin carboxyl-terminal hydrolase BAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12439.12439.3 12.59 8.42 1.412 3 1 1 0 675.3711 1944.1278 S292s TMT10 287 (K) SASNKsPLVLEANR (A) S(0.0)AS(0.0)NKS(0.99)PLVLEANR K:TMT10,s:Phosphorylated S BAP1 80816.6 2 1 1051.1 183.41 HUMAN 1 1.6208 7.5556 SKSDLRKSPVFSDED-p O00566;S163-p SKSDLRKSPVFSDED 0.898002110206447 0.230511338041786 0.028 0.119666666666667 0.915935271204685 8.39382947208762 0.028 0.119666666666667 0.809853517580906 0.144749493516689 0.252656679488589 1.70285218904545 O00566 MPHOSPH10 O00566.S163.p_MPHOSPH10 O00566_S163sS167sS171s_3_3_163_171 O00566 O00566|U3KQ48 U3 small nucleolar ribonucleoprotein protein MPP10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27847.28468.5 14.85 14.85 1.513 6 3 3 0 877.8284 4145.206 S163s S167s S171s TMT10 158 (K) SDLRKsPVFsDEDsDLDFDISKLEQQSK (V) S(0.0)DLRKS(0.99)PVFS(0.99)DEDS(0.99)DLDFDIS(0.0)KLEQQS(0.0)K K:TMT10,s:Phosphorylated S MPHOSPH10 78976.5 8 6 2195.1 93.81 HUMAN 1 0.9159 8.3938 SKSFGRDSDEGKLEK-p Q9UKL3;S1161-p SKSFGRDSDEGKLEK 0.134264480831341 0.00360332108061802 -0.375 -1.00633333333333 17.9083126973855 36.3436212606218 -0.375 -1.00633333333333 0.0161870880941464 0.000232080084509209 -3.44373329270516 -8.60225322767972 Q9UKL3 CASP8AP2 Q9UKL3.S1161.p_CASP8AP2 Q9UKL3_S1161s _1_1_1161_1161 Q9UKL3 Q9UKL3|A0A087WTW5 CASP8-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10978.10978.4 11.11 11.11 3.409 2 1 1 0 559.5466 2155.1962 S1161s TMT10 1156 (K) SFGRDsDEGKLEK (T) S(0.0)FGRDS(0.99)DEGKLEK K:TMT10,s:Phosphorylated S CASP8AP2 224993 1 6 740.1 234.21 HUMAN 1 -17.9083 -36.3436 SKSFKLYSPKEPPNG-p Q86U70;S19-p SKSFKLYSPKEPPNG 0.516754558486383 0.299915739334881 0.087 0.127 5.29392452445661 6.90404658929153 0.087 0.127 0.295534065073105 0.203983641764116 1.15765886940584 1.44381297804124 Q86U70 LDB1 Q86U70.S19.p_LDB1 Q86U70_S19s _1_1_19_19 Q86U70 Q86U70 LIM domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29068.29280.5 21.72 17.1 3.766 7 1 1 0 1053.1271 5181.6371 S19s TMT10 17 (K) LYsPKEPPNGNAFPPFHPGTMLDRDVGPTPMYPPTYLEPGIGR (H) LY(0.0)S(0.99)PKEPPNGNAFPPFHPGT(0.0)MLDRDVGPT(0.0)PMY(0.0)PPT(0.0)Y(0.0)LEPGIGR K:TMT10,s:Phosphorylated S LDB1 47159.4 4 1 765.1 229.16 HUMAN 1 5.2939 6.904 SKSHSDNSPNAFKDA-p O94875-12;S243-p SKSHSDNSPNAFKDA 0.111108589236148 0.0901418714903252 -0.384666666666667 -0.234 19.9439990444198 13.8303678943707 -0.384666666666667 -0.234 0.0101297819164614 0.0413964606057571 -3.86694225556907 -2.6602538335563 O94875 SORBS2 O94875.12.S243.p_SORBS2 O94875-12_S243s _1_1_243_243 O94875-12 O94875-11|O94875-7|O94875-10|O94875-12|O94875-4|O94875-2 Isoform 12 of Sorbin and SH3 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6844.6844.3 8.96 8.96 4.211 3 1 1 0 581.2818 1661.8648 S243s TMT10 238 (K) SHSDNsPNAFK (D) S(0.0)HS(0.0)DNS(0.99)PNAFK K:TMT10,s:Phosphorylated S SORBS2 81021.6 1 4 962.1 194.05 HUMAN 1 -19.944 -13.8304 SKSHWNKTIHGLIYN-p Q14738;T461-p SKSHWNKTIHGLIYN 0.206941841188072 0.0194744971299651 -0.99 0.826 13.2245214200043 23.4877998068705 -0.99 0.826 0.0475935234789645 0.00447940179105734 -2.55160429817361 4.66532989215412 Q14738 PPP2R5D Q14738.T461.p_PPP2R5D Q14738_T461t_1_1_461_461 Q14738 Q14738|E9PFR3 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24453.24453.3 17.01 17.01 15.46 2 1 1 0 594.6758 1701.0463 T461t N468n TMT10 461 (K) tIHGLIYnALK (L) T(0.99)IHGLIY(0.0)N(1.0)ALK K:TMT10,t:Phosphorylated T,n:Deamidated PPP2R5D 70332.8 1 7 2426.1 83.98 HUMAN 1 -13.2245 23.4878 SKSLSKRSLRDLMEE-p P53794;S673-p SKSLSKRSLRDLMEE 0.953787591584108 0.572500692280055 0.0116666666666667 -0.156333333333333 0.403474486175342 3.26491942445177 0.0116666666666667 -0.156333333333333 0.911281495104972 0.47152861962273 0.116733432637491 -0.773611211339719 P53794 NotFound P53794.S673.p_NotFound P53794_S673s _1_1_673_673 P53794 P53794 Sodium/myo-inositol cotransporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.35067.35067.3 11.29 11.29 11.288 2 1 1 0 921.1006 2681.3146 S673s TMT10 673 (R) sLRDLMEEEAVCLQMLEETR (Q) S(0.99)LRDLMEEEAVCLQMLEET(0.0)R C:Carbamidomethylation,s:Phosphorylated S SLC5A3 80548.3 1 1 6507.1 11.29 HUMAN 1 0.4035 -3.2649 SKSPRQNSPVTQDGI-p O75815;S83-p SKSPRQNSPVTQDGI 0.187103126028544 0.0263581786161247 -0.275 -0.293 14.3009945522235 21.4494415982334 -0.275 -0.293 0.0371450155743252 0.00716235495531002 -2.74835099518727 -4.19286189243367 O75815 BCAR3 O75815.S83.p_BCAR3 O75815_S83s _1_1_83_83 O75815 O75815 Breast cancer anti-estrogen resistance protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15486.15486.3 16.34 16.34 2.657 3 1 1 0 798.7025 2314.1261 S83s TMT10 81 (R) QNsPVTQDGIQESPWQDR (H) QNS(0.99)PVT(0.0)QDGIQES(0.0)PWQDR s:Phosphorylated S BCAR3 93533.8 9 2 401.1 327.42 HUMAN 1 -14.301 -21.4494 SKSQSEMSLEGFSEG-p Q9Y4D2;S732-p SKSQSEMSLEGFSEG 0.39120743112417 0.771394160664152 0.152333333333333 -0.0386666666666666 7.5166400970892 1.55940190569073 0.152333333333333 -0.0386666666666666 0.177147892631664 0.69832856868481 1.55117908846531 -0.4088120080041 Q9Y4D2 DAGLA Q9Y4D2.S732.p_DAGLA Q9Y4D2_S732s _1_1_732_732 Q9Y4D2 Q9Y4D2 Sn1-specific diacylglycerol lipase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16697.16697.2 9.63 9.63 1.427 4 1 1 0 926.903 1772.8322 S732s TMT10 727 (K) SQSEMsLEGFSEGR (L) S(0.0)QS(0.0)EMS(0.99)LEGFS(0.0)EGR s:Phosphorylated S DAGLA 116490.4 1 3 1490.1 137.27 HUMAN 1 7.5166 -1.5594 SKSRSRHSHSGEERA-p Q14004-2;S236-p SKSRSRHSHSGEERA 0.601142606804026 0.975513571665078 0.186 0.00966666666666669 4.08242604726869 0.152540068201931 0.186 0.00966666666666664 0.390622625992496 0.965486027772229 0.932852974001057 0.0453049683530801 Q14004 CDK13 Q14004.2.S236.p_CDK13 Q14004-2_S236s _1_1_236_236 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3804.3804.3 9.81 9.81 1.475 2 1 1 0 582.6109 1665.8506 S236s Hydrogen 235 (R) HsHSGEERAEVAK (S) HS(0.99)HS(0.0)GEERAEVAK K:TMT10-Lys-Only,s:Phosphorylated S CDK13 159173.6 1 1 145.1 520.12 HUMAN 1 4.0824 0.1525 SKSSAMSSDGSLAEN-p Q9NZB2-6;S1073-p SKSSAMSSDGSLAEN 0.202089387369954 0.00863269704744706 0.195333333333333 0.445333333333333 13.4804841230575 29.2818604875337 0.195333333333333 0.445333333333333 0.0448695369522778 0.00117981510274319 2.59801879714029 6.20703916578258 Q9NZB2 FAM120A Q9NZB2.6.S1073.p_FAM120A Q9NZB2-6_S1072sS1073sS1076s_3_3_1072_1076 Q9NZB2-6 Q9NZB2-6|Q9NZB2-4 Isoform F of Constitutive coactivator of PPAR-gamma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20845.20845.4 15.91 15.91 2.669 7 3 3 0 996.4153 3740.7566 S1072s S1073s S1076s N1080n N1093n TMT10 1068 (K) SSAMssDGsLAEnGVMAEEKPAPQMnGSTGDAR (A) S(0.0)S(0.0)AMS(0.99)S(0.99)DGS(0.99)LAEN(1.0)GVMAEEKPAPQMN(1.0)GS(0.0)T(0.0)GDAR K:TMT10,s:Phosphorylated S,n:Deamidated FAM120A 126524.7 5 16 839.1 214.86 HUMAN 1 13.4805 29.2819 SKSSGFGSPRLVSRS-p A1L390;S631-p SKSSGFGSPRLVSRS 0.700782909342861 0.00886193742486239 -0.0553333333333333 -0.443666666666667 2.90360504553696 29.0803259047622 -0.0553333333333333 -0.443666666666667 0.512435838294029 0.0012358546885311 -0.700764456349785 -6.14776457644172 A1L390 PLEKHG3 A1L390.S631.p_PLEKHG3 A1L390_S631s _1_1_631_631 A1L390 A1L390|A1L390-3|A1L390-2|G3V311 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6091.6091.2 11.3 3.82 5.037 3 1 1 0 552.2581 1023.5421 S631s TMT10 626 (K) SSGFGsPR (L) S(0.0)S(0.0)GFGS(0.99)PR s:Phosphorylated S PLEKHG3 135322.7 2 7 284.1 386.18 HUMAN 1 -2.9036 -29.0803 SKSSRSSSLGNKSPQ-p Q9H4A3-7;S2553-p SKSSRSSSLGNKSPQ 0.140218997800079 0.00238856624082869 0.257666666666667 1.27466666666667 17.4557336770613 40.2550094658298 0.257666666666667 1.27466666666667 0.0179649756252681 9.42972556166122e-05 3.35294156676699 10.2466612182786 Q9H4A3 WNK1 Q9H4A3.7.S2553.p_WNK1 Q9H4A3-7_S2553s _1_1_2553_2553 Q9H4A3-7 Q9H4A3-7 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7065.7065.2 9.85 2.65 1.308 3 1 1 0 615.8284 1150.6832 S2553s TMT10 2551 (R) SSsLGNK (S) S(0.0)S(0.0)S(0.99)LGNK K:TMT10,s:Phosphorylated S WNK1 301202.7 1 22 162.1 495.27 HUMAN 1 17.4557 40.255 SKSSSPNSPLPMFRR-p A0A0U1RR27;S731-p SKSSSPNSPLPMFRR 0.303936907431484 0.654976908619292 0.160666666666667 -0.043 9.68996489636306 2.51214956401154 0.160666666666667 -0.043 0.107399809333729 0.560770351015971 1.92789349230601 -0.619375552665829 A0A0U1RR27 NotFound A0A0U1RR27.S731.p_NotFound A0A0U1RR27_S731s _1_1_731_731 A0A0U1RR27 A0A0U1RR27|Q7Z401-2 C-myc promoter-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19811.19811.3 13.12 13.12 1.61 4 1 1 0 543.5951 1548.8042 S731s TMT10 726 (K) SSSPNsPLPMFR (R) S(0.0)S(0.0)S(0.0)PNS(0.99)PLPMFR s:Phosphorylated S DENND4A 217514.7 7 2 399.1 328.24 HUMAN 1 9.69 -2.5121 SKSTEDLSPQKSGPV-p Q96RT1-8;S857-p SKSTEDLSPQKSGPV 0.134150744259901 0.0067839258240158 0.71 -0.926333333333333 17.9483081965424 31.130919597107 0.71 -0.926333333333333 0.0160387006002916 0.000770740251344756 3.45181143028203 -6.77245433548886 Q96RT1 ERBB2IP Q96RT1.8.S857.p_ERBB2IP Q96RT1-8_S857s _1_1_857_857 Q96RT1-8 Q96RT1-8|Q96RT1-2 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15932.15932.3 12.41 12.41 1.405 5 1 1 0 861.4733 2502.4382 S857s TMT10 852 (K) STEDLsPQKSGPVGSVVK (S) S(0.0)T(0.0)EDLS(0.99)PQKS(0.0)GPVGS(0.0)VVK K:TMT10,s:Phosphorylated S ERBIN 159762.8 4 12 81.1 633.5 HUMAN 1 17.9483 -31.1309 SKSVLPRTPESWRLT-p Q08050-3;T658-p SKSVLPRTPESWRLT 0.356108068197239 0.0079657699052288 0.154666666666667 -0.748666666666667 8.33385813865624 29.9265261759857 0.154666666666667 -0.748666666666667 0.146762190816664 0.00101706189256099 1.69303222105028 -6.39968888683955 Q08050 FOXM1 Q08050.3.T658.p_FOXM1 Q08050-3_T658t _1_1_658_658 Q08050-3 Q08050-3|Q08050-2|A0A0D9SFF0 Isoform 4 of Forkhead box protein M1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14648.14648.3 13.43 13.43 2.554 3 1 1 0 546.2849 1556.8746 T658t TMT10 653 (K) SVLPRtPESWR (L) S(0.0)VLPRT(0.99)PES(0.0)WR t:Phosphorylated T FOXM1 89107.7 3 4 1076.1 180.52 HUMAN 1 8.3339 -29.9265 SKTADNATKNAEPLI-p Q9Y224;T114-p SKTADNATKNAEPLI 0.513314534436529 0.255670999258198 0.095 -0.130666666666667 5.3511464941979 7.80088082109415 0.095 -0.130666666666667 0.291665694396255 0.165925034987396 1.16803595747224 -1.60010473686489 Q9Y224 C14orf166 Q9Y224.T114.p_C14orf166 Q9Y224_Y99yS107sT114t_3_3_99_114 Q9Y224 Q9Y224|G3V4C6 RNA transcription, translation and transport factor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13629.13629.5 8.08 3.45 1.124 4 3 3 0 608.497 2796.5913 Y99y N106n S107s N112n T114t TMT10 99 (K) yKDLVPDnsKTADnAtK (N) Y(0.99)KDLVPDN(1.0)S(0.99)KT(0.0)ADN(1.0)AT(0.99)K K:TMT10,y:Phosphorylated Y,n:Deamidated,s:Phosphorylated S,t:Phosphorylated T RTRAF 28181.7 1 2 5345.1 20.24 HUMAN 1 5.3511 -7.8009 SKTDQRWSSTSSSKI-p P49959;S667-p SKTDQRWSSTSSSKI 0.298583715457429 0.781985415408876 0.147666666666667 -0.052 9.86654976200298 1.47876275195862 0.147666666666667 -0.052 0.103120503249927 0.711416157923082 1.95853465293078 -0.389963636245676 P49959 MRE11A P49959.S667.p_MRE11A P49959_S667s _1_1_667_667 P49959 P49959-3|F8W7U8|P49959-2 Double-strand break repair protein MRE11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6909.6909.3 9.31 6.99 1.172 7 1 1 0 636.6469 1827.9601 S667s TMT10 662 (K) TDQRWsSTSSSK (I) T(0.0)DQRWS(0.99)S(0.0)T(0.0)S(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S MRE11 80934.2 2 8 588.1 264.48 HUMAN 1 9.8665 -1.4788 SKTEQSVTPEQQKKL-p Q9BY11;T184-p SKTEQSVTPEQQKKL 0.401796102098674 0.668684537466373 0.178333333333333 -0.138333333333333 7.30913803616412 2.39124665569201 0.178333333333333 -0.138333333333333 0.185817321851059 0.576600924562123 1.51502503202485 -0.593728969347099 Q9BY11 PACSIN1 Q9BY11.T184.p_PACSIN1 Q9BY11_T184t _1_1_184_184 Q9BY11 Q9BY11|F6U236 Protein kinase C and casein kinase substrate in neurons protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6692.6692.4 14.5 14.5 2.971 3 1 1 0 543.2988 2090.206 T184t TMT10 179 (K) TEQSVtPEQQKK (L) T(0.0)EQS(0.0)VT(0.99)PEQQKK K:TMT10,t:Phosphorylated T PACSIN1 51307 9 3 968.1 193.63 HUMAN 1 7.3091 -2.3912 SKTERSKSYDEGLDD-p Q5T5U3;S880-p SKTERSKSYDEGLDD 0.821896268924698 0.0870917569532257 -0.032 0.245666666666667 1.63966845806174 14.0325246780634 -0.032 0.245666666666667 0.685540558862998 0.0395136848934232 -0.427438024527932 2.69726944100179 Q5T5U3 ARHGAP21 Q5T5U3.S880.p_ARHGAP21 Q5T5U3_S880s _1_1_880_880 Q5T5U3 Q5T5U3|A0A1B0GV73 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13679.13679.3 11.37 7.07 1.72 3 1 1 0 738.6729 2134.0341 S880s TMT10 880 (K) sYDEGLDDYREDAK (L) S(0.99)Y(0.0)DEGLDDY(0.0)REDAK K:TMT10,s:Phosphorylated S ARHGAP21 218696.3 3 14 148.1 512.52 HUMAN 1 -1.6397 14.0325 SKTIPVKSPNLSEIK-p Q9H792;S587-p SKTIPVKSPNLSEIK 0.435048063020442 0.00257185058433366 -0.104 -0.715333333333333 6.65563586340067 39.5473542031719 -0.104 -0.71383086990886 0.215991377225679 0.000110985074954937 -1.40058895325471 -9.92961697031214 Q9H792 PEAK1 Q9H792.S587.p_PEAK1 Q9H792_S587s _1_1_587_587 Q9H792 Q9H792|H0YN99 Pseudopodium-enriched atypical kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20689.20689.3 12.46 8.89 1.195 3 1 1 0 731.766 2113.32 S587s TMT10 582 (K) TIPVKsPNLSEIK (F) T(0.0)IPVKS(0.99)PNLS(0.0)EIK K:TMT10,s:Phosphorylated S PEAK1 195156.9 1 5 583.1 265.81 HUMAN 1 -6.6556 -39.5474 SKTKETDSPSTPGKD-p Q7Z5J4;S1133-p SKTKETDSPSTPGKD 0.288657613845318 0.0822101506802639 -0.274 0.2 10.1753529373771 14.3776795811508 -0.274 0.2 0.0960427764291169 0.036494888564084 -2.01219239642603 2.76081815660171 Q7Z5J4 RAI1 Q7Z5J4.S1133.p_RAI1 Q7Z5J4_S1133s _1_1_1133_1133 Q7Z5J4 Q7Z5J4|Q7Z5J4-2|A0A1W2PQJ7|Q7Z5J4-3 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4564.4564.3 14.59 8.7 1.399 5 1 1 0 805.4215 2334.2868 S1133s TMT10 1128 (K) TKETDsPSTPGKDQR (S) T(0.0)KET(0.0)DS(0.99)PS(0.0)T(0.0)PGKDQR K:TMT10,s:Phosphorylated S RAI1 206315.3 4 13 142.1 522.21 HUMAN 1 -10.1754 14.3777 SKTKKRRSLGLGPGE-p Q8N5C6;S964-p SKTKKRRSLGLGPGE 0.612980948063973 0.00604775327324358 0.102666666666667 -0.619666666666667 3.94246282508638 32.0300400460347 0.102666666666667 -0.619666666666667 0.403416556032781 0.000626608086729962 0.906115247646395 -7.06214474706418 Q8N5C6 SRBD1 Q8N5C6.S964.p_SRBD1 Q8N5C6_S964s _1_1_964_964 Q8N5C6 Q8N5C6 S1 RNA-binding domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29726.29726.3 17.13 7.58 99 1 1 1 0 857.4689 2490.4241 S964s TMT10 964 (R) sLGLGPGERVEVQVLNIDIPR (S) S(1.0)LGLGPGERVEVQVLNIDIPR s:Phosphorylated S SRBD1 113028.8 2 2 3224.1 56.8 HUMAN 1 3.9425 -32.03 SKTLKTESPNASRGS-p Q2LD37;S3894-p SKTLKTESPNASRGS 0.108085133456159 0.0445806846304834 0.431 0.264666666666667 20.3021890915222 18.0839677329141 0.431 0.264666666666667 0.00932784006017604 0.015545447439295 3.94410562711799 3.47641589327817 Q2LD37 KIAA1109 Q2LD37.S3894.p_KIAA1109 Q2LD37_S3894s _1_1_3894_3894 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6474.6474.2 12.34 8.14 2.138 4 1 1 0 871.4656 1661.9587 S3894s TMT10 3889 (K) TLKTEsPNASR (G) T(0.0)LKT(0.0)ES(0.99)PNAS(0.0)R K:TMT10,s:Phosphorylated S KIAA1109 559693.9 3 23 143.1 520.8 HUMAN 1 20.3022 18.084 SKTNRQKSLDSDLSD-p Q14161;S415-p SKTNRQKSLDSDLSD 0.435671177818813 0.100021310897609 0.147 0.196 6.64299524413756 13.2164806169835 0.147 0.196 0.216620959710261 0.0476817227654962 1.3983650030923 2.54872341438213 Q14161 GIT2 Q14161.S415.p_GIT2 Q14161_S415s _1_1_415_415 Q14161 Q14161|Q14161-3|Q14161-5|Q14161-6|Q14161-9|Q14161-7|Q14161-11|Q14161-2 ARF GTPase-activating protein GIT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33675.33675.3 20.1 20.1 1.139 4 1 1 0 912.1122 2654.3635 S415s TMT10 415 (K) sLDSDLSDGPVTVQEFMEVK (N) S(0.99)LDS(0.0)DLS(0.0)DGPVT(0.0)VQEFMEVK K:TMT10,s:Phosphorylated S GIT2 85168.8 7 4 474.1 301.74 HUMAN 1 6.643 13.2165 SKTRDKGSFNDKRKK-p A0A0C4DFT3;S636-p SKTRDKGSFNDKRKK 0.406668327002541 0.0499652291950844 0.239666666666667 -0.486 7.21634130564582 17.3976206061979 0.239666666666667 -0.486 0.189830446584325 0.0182069810159457 1.49883200906829 -3.33874575287371 A0A0C4DFT3 DLG1 A0A0C4DFT3.S636.p_DLG1 A0A0C4DFT3_S636s _1_1_636_636 A0A0C4DFT3 A0A0C4DFT3 Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8201.8201.3 10 5.55 99 1 1 1 0 559.9665 1597.9153 S636s TMT10 633 (R) DKGsFNDK (R) DKGS(1.0)FNDK K:TMT10,s:Phosphorylated S DLG1 100097.3 3 1 196.2 460.79 HUMAN 1 7.2163 -17.3976 SKTSLPLSPVKTAPL-p Q86XL3;S268-p SKTSLPLSPVKTAPL 0.188778224113783 0.00100708685169879 -0.207666666666667 -1.32066666666667 14.193173467219 52.2517199988229 -0.207666666666667 -1.32066666666667 0.0380787473511771 5.9542628160262e-06 -2.72845489137907 -17.2953830544551 Q86XL3 ANKLE2 Q86XL3.S268.p_ANKLE2 Q86XL3_S268s _1_1_268_268 Q86XL3 Q86XL3|Q86XL3-2 Ankyrin repeat and LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20328.20328.3 11.59 8.78 11.588 3 1 1 0 493.9584 1399.8925 S268s TMT10 263 (K) TSLPLsPVK (T) T(0.0)S(0.0)LPLS(0.99)PVK K:TMT10,s:Phosphorylated S ANKLE2 104968.3 2 3 897.1 204.02 HUMAN 1 -14.1932 -52.2517 SKTTAAHSLVGTPYY-p Q8TDX7;S195-p SKTTAAHSLVGTPYY 0.94478758147709 0.225256505978753 0.0166666666666667 -0.137 0.48322694773822 8.52546540694739 0.0166666666666667 -0.137 0.894699727822534 0.140427918746586 0.138704231468893 -1.72563070258293 Q8TDX7 NEK7 Q8TDX7.S195.p_NEK7 Q8TDX7_S195s _1_1_195_195 Q8TDX7 Q8TDX7 Serine/threonine-protein kinase Nek7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15821.15821.3 19.39 16.64 4.159 7 1 1 0 764.0303 2210.1113 S195s TMT10 190 (K) TTAAHsLVGTPYYMSPER (I) T(0.0)T(0.0)AAHS(0.99)LVGT(0.0)PY(0.0)Y(0.0)MS(0.0)PER s:Phosphorylated S NEK7 35006.8 8 2 3294.1 54.61 HUMAN 1 0.4832 -8.5255 SKTVCSTYLQSRYYR-p Q9H422;Y359-p SKTVCSTYLQSRYYR 0.176240941475 0.613102716882454 0.716333333333333 0.110666666666667 14.9721285192644 2.88711928992961 0.716333333333333 0.110666666666667 0.0318263729809211 0.514384733961059 2.87322548530165 0.697294417959108 Q9H422 HIPK3 Q9H422.Y359.p_HIPK3 Q9H422_Y359y _1_1_359_359 Q9H422 Q9H422|Q9H422-2 Homeodomain-interacting protein kinase 3 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.6437.6470.2 19.9 15.54 3.216 5 1 1 0 647.7787 1214.5834 Y359y Hydrogen 354 (K) TVCSTyLQSR (Y) T(0.0)VCS(0.0)T(0.0)Y(0.99)LQS(0.0)R C:Carbamidomethylation,y:Phosphorylated Y HIPK3 135509.4 5 2 174.1 19.9 HUMAN 1 14.9721 2.8871 SKTVKLKSPVLSNTT-p Q9P275-2;S667-p SKTVKLKSPVLSNTT 0.204713889706557 0.00389142811872595 -0.195666666666667 -0.573333333333333 13.322417876663 35.5699790930645 -0.195666666666667 -0.573333333333333 0.0465326956810963 0.000277333345544638 -2.56933047324019 -8.30642747351767 Q9P275 USP36 Q9P275.2.S667.p_USP36 Q9P275-2_S667s _1_1_667_667 Q9P275-2 Q9P275-2|A0A075B784 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18897.18897.5 19.2 12.86 3.091 8 1 1 0 625.1431 3041.716 S667s TMT10 665 (K) LKsPVLSNTTTEPASTMSPPPAK (K) LKS(0.99)PVLS(0.0)NT(0.0)T(0.0)T(0.0)EPAS(0.0)T(0.0)MS(0.0)PPPAK K:TMT10,s:Phosphorylated S USP36 124218 4 10 241.1 413.35 HUMAN 1 -13.3224 -35.57 SKTYDAASYICEAAF-p P42166;S626-p SKTYDAASYICEAAF 0.1560557092084 0.172640277394846 0.314666666666667 0.28 16.2073226070812 10.0283420139049 0.314666666666667 0.28 0.0239479167252367 0.0993495258153036 3.10810026620585 1.98582925490398 P42166 TMPO P42166.S626.p_TMPO P42166_S626s _1_1_626_626 P42166 P42166 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29826.29826.3 15.57 13.28 3.484 4 1 1 0 831.0539 2411.1841 S626s TMT10 621 (K) TYDAAsYICEAAFDEVK (M) T(0.0)Y(0.0)DAAS(0.99)Y(0.0)ICEAAFDEVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TMPO 76061.2 1 25 123.1 546.19 HUMAN 1 16.2073 10.0283 SKTYSYLTPDLWKET-p P15880;T252-p SKTYSYLTPDLWKET 0.0190481655214142 0.0798221560623504 -0.958666666666667 -0.280333333333333 40.4346154167459 14.5709217904264 -0.958666666666667 -0.280333333333333 9.04770554850504e-05 0.0349066218279237 -10.3528552808555 -2.79659664524695 P15880 RPS2 P15880.T252.p_RPS2 P15880_T252t _1_1_252_252 P15880 P15880|E9PQD7 40S ribosomal protein S2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28535.28535.3 16.97 16.97 4.826 5 1 1 0 642.3347 1845.0199 T252t TMT10 247 (K) TYSYLtPDLWK (E) T(0.0)Y(0.0)S(0.0)Y(0.0)LT(0.99)PDLWK K:TMT10,t:Phosphorylated T RPS2 31609.1 1 4 1346.1 151.14 HUMAN 1 -40.4346 -14.5709 SKVAQAPSPCIARST-p P51825-2;S1099-p SKVAQAPSPCIARST 0.457955481063929 0.05772415212498 0.151 -0.257666666666667 6.25351116884271 16.5005542875536 0.151 -0.257666666666667 0.236945728053605 0.0223843543010764 1.32960148965426 -3.16257991173885 P51825 AFF1 P51825.2.S1099.p_AFF1 P51825-2_S1099s _1_1_1099_1099 P51825-2 P51825-2|P51825-3|F5GXF9 Isoform 2 of AF4/FMR2 family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11002.11002.3 12.83 12.83 99 1 1 1 0 493.5845 1398.7725 S1099s TMT10 1094 (K) VAQAPsPCIAR (S) VAQAPS(1.0)PCIAR C:Carbamidomethylation,s:Phosphorylated S AFF1 133180 2 7 1199.1 167.15 HUMAN 1 6.2535 -16.5006 SKVASAGSAISNASG-p Q86YT6;S405-p SKVASAGSAISNASG 0.527026154039735 0.0540381948916242 0.0993333333333333 -0.229666666666667 5.14850774361458 16.8961433607647 0.0993333333333333 -0.229666666666667 0.305597097892131 0.0204355186225057 1.13120457811101 -3.23975740397704 Q86YT6 MIB1 Q86YT6.S405.p_MIB1 Q86YT6_S405s _1_1_405_405 Q86YT6 Q86YT6 E3 ubiquitin-protein ligase MIB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10779.10779.2 12.88 8.8 2.239 4 1 1 0 843.4058 1605.8394 S405s TMT10 400 (K) VASAGsAISNASGER (L) VAS(0.0)AGS(0.99)AIS(0.0)NAS(0.0)GER s:Phosphorylated S MIB1 112530.2 1 7 2088.1 98.03 HUMAN 1 5.1485 -16.8961 SKVEGVHTPRQKRST-p Q6VY07-2;T504-p SKVEGVHTPRQKRST 0.969847146216381 0.0102419910846509 -0.00633333333333334 -0.632 0.261346553469796 27.9366449875661 -0.00633333333333333 -0.632 0.94159760384157 0.00160818312715417 -0.0767272626576417 -5.81969372507738 Q6VY07 PACS1 Q6VY07.2.T504.p_PACS1 Q6VY07-2_S495sT504t_2_2_495_504 Q6VY07-2 Q6VY07-2|B4DF77 Isoform 2 of Phosphofurin acidic cluster sorting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9966.9966.5 11.34 11.34 1.145 7 2 2 0 623.9219 2955.6467 S495s T504t TMT10 485 (K) SSKTDLQGSAsPSKVEGVHtPR (Q) S(0.0)S(0.0)KT(0.0)DLQGS(0.0)AS(0.99)PS(0.0)KVEGVHT(0.99)PR K:TMT10,s:Phosphorylated S,t:Phosphorylated T PACS1 109968.1 4 14 786.1 225.23 HUMAN 1 -0.2613 -27.9366 SKVLLGFSSDESDVE-p Q9Y2U8;S140-p SKVLLGFSSDESDVE 0.5393051796237 0.937472703076645 -0.0913333333333333 0.00966666666666666 4.9557319158459 0.397097111523307 -0.0913333333333333 0.00966666666666666 0.319467592117865 0.912620644653081 -1.09593945413246 0.114951500704386 Q9Y2U8 LEMD3 Q9Y2U8.S140.p_LEMD3 Q9Y2U8_S140sS141s_2_2_140_141 Q9Y2U8 Q9Y2U8 Inner nuclear membrane protein Man1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27923.28350.3 14.55 14.55 2.557 4 2 2 0 732.9932 2037.0338 S140s S141s TMT10 135 (K) VLLGFssDESDVEASPR (D) VLLGFS(0.99)S(0.99)DES(0.0)DVEAS(0.0)PR s:Phosphorylated S LEMD3 100851.5 8 20 412.1 321.94 HUMAN 1 -4.9557 0.3971 SKVLSSLTPEKLYQT-p Q6P2P2;T549-p SKVLSSLTPEKLYQT 0.260757540836798 0.371787912277586 -0.195333333333333 0.0933333333333334 11.0619633340154 5.70065934753911 -0.195333333333333 0.0933333333333334 0.0783075554352185 0.269112620510385 -2.16696835835447 1.23077017354281 Q6P2P2 PRMT9 Q6P2P2.T549.p_PRMT9 Q6P2P2_T549t _1_1_549_549 Q6P2P2 Q6P2P2|Q6P2P2-2 Protein arginine N-methyltransferase 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19152.19152.3 12.57 8.82 3.29 3 1 1 0 504.6207 1431.8823 T549t TMT10 544 (K) VLSSLtPEK (L) VLS(0.0)S(0.0)LT(0.99)PEK K:TMT10,t:Phosphorylated T PRMT9 95583.7 2 1 6286.1 12.57 HUMAN 1 -11.062 5.7007 SKVNKRLSMENEELL-p Q9ULD2;S1224-p SKVNKRLSMENEELL 0.375395644744899 0.302808497806465 -0.121333333333333 -0.126333333333333 7.87260230994176 6.8506818496835 -0.121333333333333 -0.126333333333333 0.163207370973339 0.206505591308608 -1.61305248859201 -1.43446183879648 Q9ULD2 MTUS1 Q9ULD2.S1224.p_MTUS1 Q9ULD2_S1224s _1_1_1224_1224 Q9ULD2 Q9ULD2|Q9ULD2-2|Q9ULD2-6|Q9ULD2-3|Q9ULD2-7|Q9ULD2-4 Microtubule-associated tumor suppressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23474.23474.3 15.25 9.44 99 1 1 1 0 696.0327 2006.1145 S1224s TMT10 1222 (K) RLsMENEELLWK (L) RLS(1.0)MENEELLWK K:TMT10,s:Phosphorylated S MTUS1 142763.7 8 10 645.1 254.81 HUMAN 1 -7.8726 -6.8507 SKVPSPLTDEEGDFI-p Q5T0F9;T596-p SKVPSPLTDEEGDFI 0.621767197765368 0.968149405600761 0.0696666666666667 -0.00499999999999997 3.83639692028263 0.199533546040925 0.0696666666666667 -0.00499999999999997 0.413390324812544 0.955095162502228 0.885724668308559 -0.0589611569041391 Q5T0F9 CC2D1B Q5T0F9.T596.p_CC2D1B Q5T0F9_S593sT596t_2_2_593_596 Q5T0F9 Q5T0F9|Q5T0F9-2|Q5T0F9-3 Coiled-coil and C2 domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23543.23543.5 15.8 12.56 2.747 4 2 2 0 798.8035 3830.0489 S593s T596t TMT10 582 (R) SGRPVDLSKVPsPLtDEEGDFILIHHEDLR (L) S(0.0)GRPVDLS(0.0)KVPS(0.99)PLT(0.99)DEEGDFILIHHEDLR K:TMT10,s:Phosphorylated S,t:Phosphorylated T CC2D1B 94451 1 5 2588.1 77.5 HUMAN 1 3.8364 -0.1995 SKVQEAESPVFKELP-p Q08357;S268-p SKVQEAESPVFKELP 0.0520154613962689 0.00673806210231272 -0.602666666666667 -0.656 27.9369414738443 31.1811104959707 -0.602666666666667 -0.656 0.00160807334267038 0.000761884170460014 -5.82817689023568 -6.78836329355889 Q08357 SLC20A2 Q08357.S268.p_SLC20A2 Q08357_S268s _1_1_268_268 Q08357 Q08357 Sodium-dependent phosphate transporter 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16249.16249.3 11.32 11.32 99 1 1 1 0 557.964 1591.9096 S268s TMT10 263 (K) VQEAEsPVFK (E) VQEAES(1.0)PVFK K:TMT10,s:Phosphorylated S SLC20A2 70904.6 2 3 2608.1 76.8 HUMAN 1 -27.9369 -31.1811 SKVQGVGSKGWRDVT-p Q8N6T3;S284-p SKVQGVGSKGWRDVT 0.4299116301784 0.0156117994856739 -0.140666666666667 -0.432333333333333 6.75124051792821 24.9735262872988 -0.140666666666667 -0.432333333333333 0.211288542944286 0.00318161313751489 -1.41739499711355 -5.03080451021528 Q8N6T3 ARFGAP1 Q8N6T3.S284.p_ARFGAP1 Q8N6T3_S284s _1_1_284_284 Q8N6T3 Q8N6T3|Q8N6T3-4 ADP-ribosylation factor GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9814.9814.2 8.28 8.28 99 1 1 1 0 606.8411 1132.709 S284s TMT10 279 (K) VQGVGsK (G) VQGVGS(1.0)K K:TMT10,s:Phosphorylated S ARFGAP1 45009.4 1 9 243.1 413.25 HUMAN 1 -6.7512 -24.9735 SKVSGRRSPESCSKP-p Q03111;S475-p SKVSGRRSPESCSKP 0.488088514771249 0.284016611177778 0.093 0.102666666666667 5.73661095318748 7.20754944916536 0.093 0.102666666666667 0.266894057820582 0.190215128539847 1.23749741212349 1.49687105804894 Q03111 MLLT1 Q03111.S475.p_MLLT1 Q03111_S475s _1_1_475_475 Q03111 Q03111 Protein ENL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4876.4876.2 14.04 10.4 11.501 3 1 1 0 843.9127 1606.8511 S475s Hydrogen 475 (R) sPESCSKPEK (I) S(0.99)PES(0.0)CS(0.0)KPEK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S MLLT1 62454.4 13 8 685.1 243.68 HUMAN 1 5.7366 7.2075 SKVSTSGSSVDSSKK-p Q15648;S1370-p SKVSTSGSSVDSSKK 0.0775649771385732 0.469359730075671 0.447 -0.105 23.7746075546759 4.37899500899823 0.447 -0.105 0.00419313885800369 0.364838363575404 4.73996849862274 -0.988737004411272 Q15648 MED1 Q15648.S1370.p_MED1 Q15648_S1370s _1_1_1370_1370 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7259.7259.3 14.2 9.25 1.144 8 1 1 0 708.3785 2043.1537 S1370s TMT10 1363 (K) SKVSTSGsSVDSSK (K) S(0.0)KVS(0.0)T(0.0)S(0.0)GS(0.99)S(0.0)VDS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S MED1 169445 2 22 115.1 566.87 HUMAN 1 23.7746 -4.379 SKVTTFVSEDALPET-p Q9UMZ2;S952-p SKVTTFVSEDALPET 0.279768059006979 0.266884513441554 -0.293666666666667 0.130333333333333 10.4547877928822 7.55425518114653 -0.293666666666667 0.130333333333333 0.0900577766151819 0.175620205857 -2.0608454494592 1.55726057861299 Q9UMZ2 SYNRG Q9UMZ2.S952.p_SYNRG Q9UMZ2_S952s _1_1_952_952 Q9UMZ2 Q9UMZ2|Q9UMZ2-5|Q9UMZ2-7|Q9UMZ2-3 Synergin gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36545.36545.3 14.88 14.88 2.292 6 1 1 0 970.505 2829.5326 S952s TMT10 947 (K) VTTFVsEDALPETTFPALASFK (D) VT(0.0)T(0.0)FVS(0.99)EDALPET(0.0)T(0.0)FPALAS(0.0)FK K:TMT10,s:Phosphorylated S SYNRG 141393.5 1 13 236.1 418.49 HUMAN 1 -10.4548 7.5543 SKVVIKLSPQACSFT-p Q5VUA4;S1856-p SKVVIKLSPQACSFT 0.109204251400589 0.00224652614039878 -0.297 -0.729333333333333 20.1484223546888 41.0442822524342 -0.297 -0.729333333333333 0.0096640187642615 7.86270125296674e-05 -3.9108760495777 -10.6111862147954 Q5VUA4 ZNF318 Q5VUA4.S1856.p_ZNF318 Q5VUA4_S1856s _1_1_1856_1856 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22822.22822.3 15.41 15.41 3.421 3 1 1 0 782.4477 2265.3608 S1856s TMT10 1851 (K) VVIKLsPQACSFTK (A) VVIKLS(0.99)PQACS(0.0)FT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF318 252762.4 2 26 37.1 870.88 HUMAN 1 -20.1484 -41.0443 SKWKSTFSPISDIGL-p Q8TEK3;S1246-p SKWKSTFSPISDIGL 0.136285666158466 0.0360527683476488 -0.306333333333333 -0.321333333333333 17.7578224878155 19.4229569644639 -0.306333333333333 -0.321333333333333 0.0167578288739292 0.0114210045237416 -3.41341805475656 -3.75280744314921 Q8TEK3 DOT1L Q8TEK3.S1246.p_DOT1L Q8TEK3_S1246s _1_1_1246_1246 Q8TEK3 Q8TEK3|Q8TEK3-2 Histone-lysine N-methyltransferase, H3 lysine-79 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28736.28736.3 13.44 13.44 2.193 4 1 1 0 625.3418 1794.0413 S1246s TMT10 1243 (K) STFsPISDIGLAK (S) S(0.0)T(0.0)FS(0.99)PIS(0.0)DIGLAK K:TMT10,s:Phosphorylated S DOT1L 185648.6 2 23 132.1 534.85 HUMAN 1 -17.7578 -19.423 SKWNTRESYDDVSSF-p H7C2Q8;S319-p SKWNTRESYDDVSSF 0.301590454921122 0.145122203658151 -0.159333333333333 -0.243333333333333 9.76655254349443 11.0404526555948 -0.159333333333333 -0.243333333333333 0.105522420752985 0.078696376191685 -1.941179711261 -2.16221887587958 H7C2Q8 EBNA1BP2 H7C2Q8.S319.p_EBNA1BP2 H7C2Q8_S319s _1_1_319_319 H7C2Q8 H7C2Q8 EBNA1 binding protein 2, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15436.15436.3 12.51 12.51 1.716 5 1 1 0 690.9762 1990.9456 S319s TMT10 314 (K) WNTREsYDDVSSFR (A) WNT(0.0)RES(0.99)Y(0.0)DDVS(0.0)S(0.0)FR s:Phosphorylated S EBNA1BP2 40854.9 1 1 6298.1 12.51 HUMAN 1 -9.7666 -11.0405 SKYEAQGSLTKSHSA-p Q9UHF7-2;S1022-p SKYEAQGSLTKSHSA 0.17810369291245 0.0446192884078239 -0.232666666666667 -0.376 14.8078213212414 18.0781359141897 -0.232666666666667 -0.376 0.033053531557487 0.0155663362904319 -2.84248501228435 -3.47523510198354 Q9UHF7 TRPS1 Q9UHF7.2.S1022.p_TRPS1 Q9UHF7-2_S1022s _1_1_1022_1022 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11021.11021.2 12.13 6.66 2.172 3 1 1 0 767.8968 1454.8255 S1022s TMT10 1017 (K) YEAQGsLTK (S) Y(0.0)EAQGS(0.99)LT(0.0)K K:TMT10,s:Phosphorylated S TRPS1 145246 2 32 14.1 1150.14 HUMAN 1 -14.8078 -18.0781 SKYFPSSSPVNILLS-p Q7Z333-4;S1686-p SKYFPSSSPVNILLS 0.148266672319898 0.0552713103506331 -0.539333333333333 -0.487333333333333 16.768070003975 16.7553520492361 -0.539333333333333 -0.487333333333333 0.0210471356248163 0.0211088607552441 -3.21709271578291 -3.21219961146902 Q7Z333 SETX Q7Z333.4.S1686.p_SETX Q7Z333-4_S1686s _1_1_1686_1686 Q7Z333-4 Q7Z333-4|Q7Z333-3 Isoform 4 of Probable helicase senataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36287.36287.3 21.07 21.07 1.105 9 1 1 0 1014.1939 2960.6021 S1686s TMT10 1681 (K) YFPSSsPVNILLSSQSVSDTFVK (E) Y(0.0)FPS(0.0)S(0.0)S(0.99)PVNILLS(0.0)S(0.0)QS(0.0)VS(0.0)DT(0.0)FVK K:TMT10,s:Phosphorylated S SETX 310728.6 2 16 192.1 463.82 HUMAN 1 -16.7681 -16.7554 SKYGLQDSDEEEEEH-p P52948;S888-p SKYGLQDSDEEEEEH 0.250689107676978 0.0217642358956385 -0.189666666666667 0.372666666666667 11.4655265804856 22.7236114519859 -0.189666666666667 0.372666666666667 0.0713587677629526 0.00534120017797578 -2.23787643296943 4.48444706743247 P52948 NUP98 P52948.S888.p_NUP98 P52948_S888s _1_1_888_888 P52948 P52948|P52948-5|P52948-2|P52948-6|P52948-3|P52948-4 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10813.10813.4 18.52 18.52 6.264 3 1 1 0 608.2748 2350.1087 S888s TMT10 883 (K) YGLQDsDEEEEEHPSK (T) Y(0.0)GLQDS(0.99)DEEEEEHPS(0.0)K K:TMT10,s:Phosphorylated S NUP98 198716.8 4 13 187.1 472.84 HUMAN 1 -11.4655 22.7236 SKYNLDASEEEDSNK-p O95218-2;S188-p SKYNLDASEEEDSNK 0.218544112853148 0.138046624646755 -0.249 0.174 12.7291363494715 11.3316112444721 -0.249 0.174 0.0533440966549125 0.0735934013297424 -2.4623713772108 2.21327732916924 O95218 ZRANB2 O95218.2.S188.p_ZRANB2 O95218-2_S188s _1_1_188_188 O95218-2 O95218|O95218-2 Isoform 2 of Zinc finger Ran-binding domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18261.18261.4 24.93 21.41 4.003 5 1 1 0 1187.8287 4668.3185 S188s TMT10 167 (K) YKLDEDEDEDDADLSKYNLDAsEEEDSNKK (K) Y(0.0)KLDEDEDEDDADLS(0.0)KY(0.0)NLDAS(0.99)EEEDS(0.0)NKK K:TMT10,s:Phosphorylated S ZRANB2 36774.1 18 4 212.1 438.05 HUMAN 1 -12.7291 11.3316 SKYSRHYSPEDEPSP-p Q6ZSR9;S294-p SKYSRHYSPEDEPSP 0.374713726213654 0.0057354115382082 0.123333333333333 0.576666666666667 7.89365231613101 32.4454232605372 0.123333333333333 0.576666666666667 0.162418228151654 0.000569452722936689 1.61670656759278 7.19940694825848 Q6ZSR9 NotFound Q6ZSR9.S294.p_NotFound Q6ZSR9_S294s _1_1_294_294 Q6ZSR9 Q6ZSR9 Uncharacterized protein FLJ45252 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15607.15607.3 18.18 18.18 5.57 4 1 1 0 889.764 2587.3081 S294s TMT10 292 (R) HYsPEDEPSPEAQPIAAYK (I) HY(0.0)S(0.99)PEDEPS(0.0)PEAQPIAAY(0.0)K K:TMT10,s:Phosphorylated S 38203.6 3 3 3163.1 58.95 HUMAN 1 7.8937 32.4454 SLADCNFSYTSSRDA-p Q6R327-3;S1320-p SLADCNFSYTSSRDA 0.951125463979824 0.423812178637963 -0.00933333333333335 -0.0823333333333333 0.430216321918707 4.96387860242349 -0.00933333333333335 -0.0823333333333333 0.905687487514844 0.318868882500134 -0.124137416928205 -1.09721407767958 Q6R327 RICTOR Q6R327.3.S1320.p_RICTOR Q6R327-3_S1320s _1_1_1320_1320 Q6R327-3 Q6R327-3 Isoform 3 of Rapamycin-insensitive companion of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14665.14665.3 16.04 16.04 2.917 6 1 1 0 606.2643 1736.8111 S1320s TMT10 1313 (K) SLADCNFsYTSSR (D) S(0.0)LADCNFS(0.99)Y(0.0)T(0.0)S(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S RICTOR 197118.3 2 17 452.1 308.36 HUMAN 1 -0.4302 -4.9639 SLADPGSSDDDDVSS-p A8MW92;S882-p SLADPGSSDDDDVSS 0.958362880460048 0.112146275073429 0.00966666666666667 0.211666666666667 0.358359982334956 12.5397761272582 0.00966666666666666 0.211666666666667 0.920797224942681 0.055721447181965 0.104155921077343 2.42718253856714 A8MW92 PHF20L1 A8MW92.S882.p_PHF20L1 A8MW92_S881sS882s_2_2_881_882 A8MW92 A8MW92|F8W9L8 PHD finger protein 20-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22147.22147.3 18.36 14.68 1.152 5 2 2 0 1062.0914 3024.3214 S881s S882s TMT10 875 (K) SLADPGssDDDDVSSLEEEQEFHMR (S) S(0.0)LADPGS(0.99)S(0.99)DDDDVS(0.0)S(0.0)LEEEQEFHMR s:Phosphorylated S PHF20L1 116320.5 1 10 1882.1 109.28 HUMAN 1 0.3584 12.5398 SLADPLDTPPDSKEG-p Q5T2W1;T480-p SLADPLDTPPDSKEG 0.340522890201666 0.0392377041968168 -0.224333333333333 0.263 8.70280457412409 18.8770415871347 -0.224333333333333 0.263 0.13480920345284 0.0129507774765889 -1.75691786331732 3.63882447353995 Q5T2W1 PDZK1 Q5T2W1.T480.p_PDZK1 Q5T2W1_T480t _1_1_480_480 Q5T2W1 Q5T2W1|Q5T2W1-2|A8MUH7 Na(+)/H(+) exchange regulatory cofactor NHE-RF3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27774.27774.4 22.14 22.14 5.944 4 1 1 0 690.8902 2680.574 T480t TMT10 467 (K) KIPIVSSLADPLDtPPDSK (E) KIPIVS(0.0)S(0.0)LADPLDT(0.99)PPDS(0.0)K K:TMT10,t:Phosphorylated T PDZK1 57413.6 5 10 1301.1 156.33 HUMAN 1 -8.7028 18.877 SLAEAVGSPPPAATP-p Q9Y6I3-1;S540-p SLAEAVGSPPPAATP 0.811708655054686 0.997723120144405 -0.0383333333333333 0.000333333333333352 1.74220357585158 0.0135158960179551 -0.0383333333333333 0.00033333333333337 0.669544801479238 0.996892687650215 -0.450922825714728 0.00407719330630041 Q9Y6I3 EPN1 Q9Y6I3.1.S540.p_EPN1 Q9Y6I3-1_S540s _1_1_540_540 Q9Y6I3-1 Q9Y6I3-1|Q9Y6I3-3 Isoform 2 of Epsin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17426.17426.4 19.15 19.15 2.241 6 1 1 0 621.0717 2401.2925 S540s TMT10 532 (R) GSLAEAVGsPPPAATPTPTPPTR (K) GS(0.0)LAEAVGS(0.99)PPPAAT(0.0)PT(0.0)PT(0.0)PPT(0.0)R s:Phosphorylated S EPN1 69266.5 3 4 856.1 210.87 HUMAN 1 -1.7422 0.0135 SLAEPATSPGGNAEA-p Q13105-2;S120-p SLAEPATSPGGNAEA 0.455257033490563 0.0273588124414629 -0.107333333333333 0.341 6.30268890387179 21.2001641092216 -0.107333333333333 0.341 0.234277785168849 0.00758548910786716 -1.33831108058518 4.13721310310305 Q13105 ZBTB17 Q13105.2.S120.p_ZBTB17 Q13105-2_S120s _1_1_120_120 Q13105-2 Q13105-2 Isoform 2 of Zinc finger and BTB domain-containing protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18294.18294.3 16.8 16.8 1.128 4 1 1 0 894.4448 2601.3408 S120s TMT10 113 (K) SLAEPATsPGGNAEALATEGGDK (R) S(0.0)LAEPAT(0.0)S(0.99)PGGNAEALAT(0.0)EGGDK K:TMT10,s:Phosphorylated S ZBTB17 90416.5 5 1 2774.1 71.14 HUMAN 1 -6.3027 21.2002 SLAFEEGSQSTTISS-p Q13315;S1981-p SLAFEEGSQSTTISS 0.103158959778694 0.0246924727317736 0.419 0.332666666666667 20.8181237506344 21.8812192133016 0.419 0.332666666666667 0.00828299930534134 0.00648452365212826 4.05677012280919 4.29031458298773 Q13315 ATM Q13315.S1981.p_ATM Q13315_S1981s _1_1_1981_1981 Q13315 Q13315 Serine-protein kinase ATM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23555.23555.2 19.97 19.97 1.211 8 1 1 0 1270.1263 2459.2917 S1981s TMT10 1974 (R) SLAFEEGsQSTTISSLSEK (S) S(0.0)LAFEEGS(0.99)QS(0.0)T(0.0)T(0.0)IS(0.0)S(0.0)LS(0.0)EK K:TMT10,s:Phosphorylated S ATM 355759 5 5 2613.1 76.72 HUMAN 1 20.8181 21.8812 SLAGPKGSPSESEKE-p Q9NYD6;S226-p SLAGPKGSPSESEKE 0.18947715453248 0.00987906290264591 -0.550333333333333 0.491666666666667 14.1381056550151 28.2052631683689 -0.550333333333333 0.491666666666667 0.0385646535781351 0.00151172809076653 -2.71831032049986 5.89550217098046 Q9NYD6 HOXC10 Q9NYD6.S226.p_HOXC10 Q9NYD6_S226s _1_1_226_226 Q9NYD6 Q9NYD6 Homeobox protein Hox-C10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13976.13976.5 17.27 17.27 1.309 9 1 1 0 803.217 3932.0906 S226s TMT10 204 (K) SDSQTPSPNEIKTEQSLAGPKGsPSESEK (E) S(0.0)DS(0.0)QT(0.0)PS(0.0)PNEIKT(0.0)EQS(0.0)LAGPKGS(0.99)PS(0.0)ES(0.0)EK K:TMT10,s:Phosphorylated S HOXC10 38585.3 6 8 634.1 256.49 HUMAN 1 -14.1381 28.2053 SLAIMGVSPPMSSVV-p Q8NA72;S512-p SLAIMGVSPPMSSVV 0.0948633510902073 0.701755186172825 -0.388666666666667 0.0486666666666667 21.7246398365054 2.11318598421348 -0.388666666666667 0.0486666666666667 0.00672258057637508 0.614725744465096 -4.25924391205879 0.5336612317123 Q8NA72 POC5 Q8NA72.S512.p_POC5 Q8NA72_S512s _1_1_512_512 Q8NA72 Q8NA72|Q8NA72-3|D6RDG4 Centrosomal protein POC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32710.32710.3 12.02 12.02 4.182 6 1 1 0 886.1433 2576.4444 S512s TMT10 502 (R) ISSSLAIMGVsPPMSSVVVEK (H) IS(0.0)S(0.0)S(0.0)LAIMGVS(0.99)PPMS(0.0)S(0.0)VVVEK K:TMT10,s:Phosphorylated S POC5 63749.7 1 4 4119.1 37.22 HUMAN 1 -21.7246 2.1132 SLALCLDSDSEDELK-p Q86T82;S650-p SLALCLDSDSEDELK 0.848084418990848 0.0028480387803829 -0.029 -0.856 1.38378212040343 38.5100794421152 -0.029 -0.856 0.727146282178197 0.000140926301963264 -0.36755647278707 -9.48099753577139 Q86T82 USP37 Q86T82.S650.p_USP37 Q86T82_S650s _1_1_650_650 Q86T82 Q86T82|Q86T82-2 Ubiquitin carboxyl-terminal hydrolase 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24090.24090.3 19.42 17.92 1.692 4 1 1 0 774.0414 2240.1368 S650s TMT10 642 (K) SSLALCLDsDSEDELK (R) S(0.0)S(0.0)LALCLDS(0.99)DS(0.0)EDELK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S USP37 111080.6 2 4 1897.1 108.46 HUMAN 1 -1.3838 -38.5101 SLANIPLTPETQRDQ-p Q01664;T37-p SLANIPLTPETQRDQ 0.674523130091893 0.299400689422516 0.0956666666666667 -0.133 3.20552919711266 6.91470122560402 0.0956666666666667 -0.133 0.478021114705186 0.203483817843402 0.761857200563594 -1.44567915955303 Q01664 TFAP4 Q01664.T37.p_TFAP4 Q01664_T37t _1_1_37_37 Q01664 Q01664 Transcription factor AP-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29963.29963.3 17.88 17.88 3.005 3 1 1 0 826.4298 2397.3009 T37t TMT10 23 (K) EVIGGLCSLANIPLtPETQR (D) EVIGGLCS(0.0)LANIPLT(0.99)PET(0.0)QR C:Carbamidomethylation,t:Phosphorylated T TFAP4 38839 1 1 1820.1 112.81 HUMAN 1 3.2055 -6.9147 SLASKDKTPKSKSKK-p E7ETA6;T1294-p SLASKDKTPKSKSKK 0.0930004911854097 0.00195162346428314 0.83 -1.82866666666667 21.9416425579795 42.3800330412444 0.83 -1.82866666666667 0.00639492925231825 5.78091649251718e-05 4.30859718732231 -11.25545132496 E7ETA6 PCM1 E7ETA6.T1294.p_PCM1 E7ETA6_T1294t _1_1_1294_1294 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9375.9375.3 12.2 5.39 2.315 4 1 1 0 833.8166 2419.469 T1294t TMT10 1282 (K) ASAQASLASKDKtPK (S) AS(0.0)AQAS(0.0)LAS(0.0)KDKT(0.99)PK K:TMT10,t:Phosphorylated T PCM1 229381.8 2 40 13.1 1159.95 HUMAN 1 21.9416 -42.38 SLASNPYSGDLTKFG-p Q14157-5;S859-p SLASNPYSGDLTKFG 0.847373360446304 0.102258132282505 -0.04 -0.198666666666667 1.39375264822976 13.0811768959879 -0.04 -0.198666666666667 0.725478815378774 0.0491906215797313 -0.369925780431373 -2.52430956177777 Q14157 UBAP2L Q14157.5.S859.p_UBAP2L Q14157-5_S859s _1_1_859_859 Q14157-5 Q14157-5|F8W726|Q14157-3|Q14157-1|Q14157-4 Isoform 5 of Ubiquitin-associated protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16999.16999.3 13.88 13.88 5 5 1 1 0 688.3417 1983.0435 S859s TMT10 850 (R) DGSLASNPYsGDLTK (F) DGS(0.0)LAS(0.0)NPY(0.0)S(0.99)GDLT(0.0)K K:TMT10,s:Phosphorylated S UBAP2L 116866.1 2 21 189.1 467.5 HUMAN 1 -1.3938 -13.0812 SLASSSNSPISQRRP-p Q9BXB4;S181-p SLASSSNSPISQRRP 0.396926015285751 0.684916317548996 0.117666666666667 -0.0493333333333333 7.40728343727755 2.2509738012099 0.117666666666667 -0.0493333333333333 0.181665164427848 0.595528595553338 1.53213437172723 -0.563622992903377 Q9BXB4 OSBPL11 Q9BXB4.S181.p_OSBPL11 Q9BXB4_S181s _1_1_181_181 Q9BXB4 Q9BXB4 Oxysterol-binding protein-related protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15808.15808.2 18.71 18.71 1.143 7 1 1 0 938.9544 1796.934 S181s TMT10 172 (R) SFSLASSSNsPISQR (R) S(0.0)FS(0.0)LAS(0.0)S(0.0)S(0.0)NS(0.99)PIS(0.0)QR s:Phosphorylated S OSBPL11 84383.5 4 5 1360.1 150.18 HUMAN 1 7.4073 -2.251 SLASTGLSLTKVDER-p Q13492;S315-p SLASTGLSLTKVDER 0.885197669007242 0.976024404753072 -0.0323333333333334 -0.0033333333333333 1.04595942903038 0.150083845376252 -0.0323333333333334 -0.0033333333333333 0.785966538834742 0.966032228484011 -0.28536746435617 -0.0445874273568173 Q13492 PICALM Q13492.S315.p_PICALM Q13492_S315s _1_1_315_315 Q13492 Q13492|Q13492-5|Q13492-2 Phosphatidylinositol-binding clathrin assembly protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31547.31547.3 17.93 17.89 1.586 9 1 1 0 820.7795 2380.3699 S315s TMT10 299 (R) ATTLSNAVSSLASTGLsLTK (V) AT(0.0)T(0.0)LS(0.0)NAVS(0.0)S(0.0)LAS(0.0)T(0.0)GLS(0.99)LT(0.0)K K:TMT10,s:Phosphorylated S PICALM 70924.4 1 3 2544.1 79.1 HUMAN 1 -1.046 -0.1501 SLATAAGSEDAEKKV-p P16989;S79-p SLATAAGSEDAEKKV 0.623855159770314 0.617318209903101 -0.0863333333333334 -0.091 3.80745529817819 2.84832242493004 -0.0863333333333334 -0.091 0.416154380254573 0.519000477608824 -0.880140839461903 -0.689338842323792 P16989 YBX3 P16989.S79.p_YBX3 P16989_S79s_1_1_79_79 P16989 P16989|P16989-3|P16989-2 Y-box-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19223.19223.4 20.35 20.35 3.191 7 1 1 0 1230.3612 4837.4393 N55n S79s TMT10 34 (K) SPVGSGAPQAAAPAPAAHVAGnPGGDAAPAATGTAAAASLATAAGsEDAEK (K) S(0.0)PVGS(0.0)GAPQAAAPAPAAHVAGN(1.0)PGGDAAPAAT(0.0)GT(0.0)AAAAS(0.0)LAT(0.0)AAGS(0.99)EDAEK K:TMT10,n:Deamidated,s:Phosphorylated S YBX3 40089.2 3 2 929.1 199.34 HUMAN 1 -3.8075 -2.8483 SLCGEEDTEDEELEA-p Q92994;T365-p SLCGEEDTEDEELEA 0.823134573522057 0.542516204304714 -0.0316666666666667 -0.064 1.62793338936899 3.57470368649257 -0.0316666666666667 -0.064 0.687395462550522 0.43906582151208 -0.424732336238981 -0.834776985572731 Q92994 BRF1 Q92994.T365.p_BRF1 Q92994_T365t _1_1_365_365 Q92994 Q92994|Q92994-5|Q92994-8|Q92994-7|Q92994-3|Q92994-9 Transcription factor IIIB 90 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22310.22310.4 29.76 29.76 2.507 7 1 1 0 962.924 3768.6918 T365t TMT10 349 (K) DGSTEDTASSLCGEEDtEDEELEAAASHLNK (D) DGS(0.0)T(0.0)EDT(0.0)AS(0.0)S(0.0)LCGEEDT(0.99)EDEELEAAAS(0.0)HLNK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T BRF1 74808.7 3 1 1800.1 114.18 HUMAN 1 -1.6279 -3.5747 SLCQNGESPNCVEDK-p Q92664;S347-p SLCQNGESPNCVEDK 0.499236081199828 0.251123859717077 0.135666666666667 -0.126666666666667 5.55995379127779 7.90477846142835 0.135666666666667 -0.126666666666667 0.277974284393097 0.162002663120323 1.20575511794041 -1.6181313050718 Q92664 GTF3A Q92664.S347.p_GTF3A Q92664_S347s _1_1_347_347 Q92664 Q92664|A0A1X7SBT5|Q92664-2 Transcription factor IIIA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15135.15135.3 22.02 22.02 7.063 2 1 1 0 920.0921 2678.2914 S347s TMT10 335 (K) QGQGLSLCQNGEsPNCVEDK (M) QGQGLS(0.0)LCQNGES(0.99)PNCVEDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GTF3A 42826.4 3 3 2798.1 70.17 HUMAN 1 5.56 -7.9048 SLDEMSQTITDLLSE-p Q8TDY2;T631-p SLDEMSQTITDLLSE 0.0608497647854506 0.0266324501207383 0.475 0.402 26.5808824955482 21.3729673324183 0.475 0.402 0.00219741330839549 0.00728959276058495 5.45563402938807 4.17574251677128 Q8TDY2 RB1CC1 Q8TDY2.T631.p_RB1CC1 Q8TDY2_T631t _1_1_631_631 Q8TDY2 Q8TDY2|Q8TDY2-2 RB1-inducible coiled-coil protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.31364.31364.3 13.32 13.32 1.434 5 1 1 0 916.1245 2666.3959 T631t TMT10 621 (K) AAQSLDEMSQtITDLLSEQK (A) AAQS(0.0)LDEMS(0.0)QT(0.99)IT(0.0)DLLS(0.0)EQK K:TMT10,t:Phosphorylated T RB1CC1 185198.6 2 6 707.1 238.96 HUMAN 1 26.5809 21.373 SLDFARYSDDGNRET-p Q9P260-2;S193-p SLDFARYSDDGNRET 0.977959877009464 0.0132282127607495 -0.00533333333333333 0.5 0.191423642113689 26.1471495523001 -0.00533333333333332 0.5 0.956880349034643 0.00242820329874398 -0.0566193147411539 5.33324770767957 Q9P260 KIAA1468 Q9P260.2.S193.p_KIAA1468 Q9P260-2_S193s _1_1_193_193 Q9P260-2 Q9P260-2|A0A075B785 Isoform 2 of LisH domain and HEAT repeat-containing protein KIAA1468 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3190.3190.2 13.13 11.75 2.915 3 1 1 0 869.3619 1657.7503 S193s Hydrogen 192 (R) YsDDGNRETDEK (V) Y(0.0)S(0.99)DDGNRET(0.0)DEK K:TMT10-Lys-Only,s:Phosphorylated S KIAA1468 139711.8 3 6 724.1 236.86 HUMAN 1 -0.1914 26.1471 SLDGAEFSRPASVSE-p Q9H4G0;S437-p SLDGAEFSRPASVSE 0.582575200829836 0.864195916578528 -0.0946666666666667 -0.037 4.31845228311996 0.894389335704564 -0.0946666666666667 -0.037 0.369960000778494 0.813881293111328 -0.977533307788647 -0.247149178119836 Q9H4G0 EPB41L1 Q9H4G0.S437.p_EPB41L1 Q9H4G0_S437sS441s_2_2_437_441 Q9H4G0 Q9H4G0|A0A0C4DH22 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11097.11097.5 14 14 1.132 5 2 2 0 873.3855 4202.9611 S437s S441s TMT10 430 (R) SLDGAEFsRPAsVSENHDAGPDGDKRDEDGESGGQR (S) S(0.0)LDGAEFS(0.99)RPAS(0.99)VS(0.0)ENHDAGPDGDKRDEDGES(0.0)GGQR K:TMT10,s:Phosphorylated S EPB41L1 99071.6 1 26 174.1 483.37 HUMAN 1 -4.3185 -0.8944 SLDIEEYSDTEVQKN-p P51580;S14-p SLDIEEYSDTEVQKN 0.887011600311395 0.0233997153972448 -0.031 0.358 1.01554817211589 22.2465628596653 -0.031 0.358 0.791489545484252 0.00596133755501083 -0.277773988283787 4.37384863480555 P51580 TPMT P51580.S14.p_TPMT P51580_S14s _1_1_14_14 P51580 P51580 Thiopurine S-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19482.19690.3 17.29 15.92 1.677 5 1 1 0 765.7062 2215.1382 S14s TMT10 6 (R) TSLDIEEYsDTEVQK (N) T(0.0)S(0.0)LDIEEY(0.0)S(0.99)DT(0.0)EVQK K:TMT10,s:Phosphorylated S TPMT 28636.2 7 2 2459.1 82.41 HUMAN 1 -1.0155 22.2466 SLDLGGDSAGRSGAG-p Q00839;S66-p SLDLGGDSAGRSGAG 0.910128808420206 0.272100437355286 0.0253333333333333 0.208333333333333 0.801536125215342 7.44518015428659 0.0253333333333333 0.208333333333333 0.831469623371572 0.180086842916479 0.223327148109179 1.5382839231741 Q00839 HNRNPU Q00839.S66.p_HNRNPU Q00839_S66s _1_1_66_66 Q00839 Q00839|Q00839-2|A0A1W2PPS1|A0A1X7SBS1 Heterogeneous nuclear ribonucleoprotein U HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21430.21430.4 26.85 26.85 5.586 2 1 1 0 859.6496 3355.6022 S66s TMT10 38 (R) LQAALDDEEAGGRPAMEPGNGSLDLGGDsAGR (S) LQAALDDEEAGGRPAMEPGNGS(0.0)LDLGGDS(0.99)AGR s:Phosphorylated S HNRNPU 91324.5 4 4 657.1 253.07 HUMAN 1 0.8015 7.4452 SLDNGGYYISPRITF-p P07948;Y194-p SLDNGGYYISPRITF 0.21223423524631 0.0127794663735556 0.272666666666667 0.405666666666667 12.993277295264 26.384377423209 0.272666666666667 0.405666666666667 0.0501963652180269 0.00229912327324819 2.50985559783155 5.39593428220509 P07948 LYN P07948.Y194.p_LYN P07948_Y194y _1_1_194_194 P07948 P07948|P07948-2 Tyrosine-protein kinase Lyn GG20160819_MSz_CCLE_T4D7_pY_Injection_01.16899.17172.2 22.13 22.13 1.115 4 1 1 0 825.8898 1570.8063 Y194y TMT10 187 (R) SLDNGGYyISPR (I) S(0.0)LDNGGY(0.0)Y(0.99)IS(0.0)PR y:Phosphorylated Y LYN 59029.4 2 1 152.1 22.13 HUMAN 1 12.9933 26.3844 SLDNKGDTDGEDQVC-p Q6ULP2;T291-p SLDNKGDTDGEDQVC 0.659766368045437 0.0374083005770803 0.069 -0.263 3.38475275358214 19.1740259689956 0.069 -0.263 0.458695758875797 0.0120947641259868 0.797532842873746 -3.70060508101855 Q6ULP2 AFTPH Q6ULP2.T291.p_AFTPH Q6ULP2_T291t _1_1_291_291 Q6ULP2 Q6ULP2|Q6ULP2-4|Q6ULP2-2|Q6ULP2-5|Q6ULP2-3 Aftiphilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21160.21160.4 24.86 24.86 4.016 5 1 1 0 823.1478 3209.5996 T291t TMT10 284 (R) SLDNKGDtDGEDQVCVSEISIVTNR (G) S(0.0)LDNKGDT(0.99)DGEDQVCVS(0.0)EIS(0.0)IVT(0.0)NR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T AFTPH 102996.9 3 2 973.1 193.16 HUMAN 1 3.3848 -19.174 SLDNQEATIVYQPHL-p Q04656-3;T293-p SLDNQEATIVYQPHL 0.840299429548807 0.0513969838193508 0.05 0.879 1.45993389869153 17.2055447324217 0.05 0.879 0.714507201070119 0.019030295269914 0.385576188260786 3.3006756695281 Q04656 ATP7A Q04656.3.T293.p_ATP7A Q04656-3_T293tS302s_2_2_293_302 Q04656-3 Q04656-3|Q04656-2|Q04656-5 Isoform 2 of Copper-transporting ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.37739.37739.4 8.59 8.59 1.765 4 2 2 0 852.1724 3229.7543 T293t S302s M306m Hydrogen 285 (K) VSLDNQEAtIVYQPHLIsVEEmKK (Q) VS(0.0)LDNQEAT(0.99)IVY(0.0)QPHLIS(0.99)VEEM(1.0)KK K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S,m:Oxidized methionine ATP7A 173615 4 8 1241.1 162.93 HUMAN 1 1.4599 17.2055 SLDQWHRSAGEEEDG-p Q66PJ3;S332-p SLDQWHRSAGEEEDG 0.229977783899196 0.325756752586621 -0.214 0.115333333333333 12.2643224145184 6.44605997377917 -0.214 0.115333333333333 0.0593700970085973 0.226669978078501 -2.37930764885503 1.36330891610533 Q66PJ3 ARL6IP4 Q66PJ3.S332.p_ARL6IP4 Q66PJ3_S332s _1_1_332_332 Q66PJ3 Q66PJ3|Q66PJ3-2|Q66PJ3-3|Q66PJ3-4|F8WCT1|Q66PJ3-7|A0A0C4DG62 ADP-ribosylation factor-like protein 6-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13985.13985.3 19.74 19.74 15.255 2 1 1 0 748.0231 2162.0865 S332s TMT10 332 (R) sAGEEEDGPVLTDEQK (S) S(0.99)AGEEEDGPVLT(0.0)DEQK K:TMT10,s:Phosphorylated S ARL6IP4 45314 10 3 1859.1 110.77 HUMAN 1 -12.2643 6.4461 SLDSESISPGDFHRK-p Q52LW3;S559-p SLDSESISPGDFHRK 0.820292136365904 0.386759851396638 0.036 -0.122666666666667 1.65756255709563 5.48398979031262 0.036 -0.122666666666667 0.682721758740257 0.282879203807729 0.431556602902436 -1.19179786133081 Q52LW3 ARHGAP29 Q52LW3.S559.p_ARHGAP29 Q52LW3_S559s _1_1_559_559 Q52LW3 Q52LW3|F8VWZ8 Rho GTPase-activating protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14987.14987.3 12.08 12.08 1.96 4 1 1 0 619.2862 1775.8762 S559s TMT10 552 (R) SLDSESIsPGDFHR (K) S(0.0)LDS(0.0)ES(0.0)IS(0.99)PGDFHR s:Phosphorylated S ARHGAP29 143601.5 1 11 517.1 284.75 HUMAN 1 1.6576 -5.484 SLDSRSVSEINSDDE-p P82094-2;S340-p SLDSRSVSEINSDDE 0.880578075090593 0.619103151365058 -0.0233333333333333 0.075 1.08676488591532 2.82976799976236 -0.0233333333333333 0.075 0.778616336146139 0.521222554085277 -0.295503084002921 0.685525833316791 P82094 TMF1 P82094.2.S340.p_TMF1 P82094-2_S340sS344s_2_2_340_344 P82094-2 P82094-2|F8WF45 Isoform 2 of TATA element modulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18293.18293.3 13.93 10.41 2.326 4 2 2 0 699.984 1938.0068 S340s S344s TMT10 338 (R) SVsEINsDDELSGK (G) S(0.0)VS(0.99)EINS(0.99)DDELS(0.0)GK K:TMT10,s:Phosphorylated S TMF1 123666.4 7 23 393.1 331.84 HUMAN 1 -1.0868 2.8298 SLDVHMDSPDINIEG-p Q09666;S4960-p SLDVHMDSPDINIEG 0.790671547034773 0.111775323898403 0.0433333333333333 0.193 1.96895689489353 12.5611350498708 0.0433333333333333 0.193 0.635483546393316 0.0554480777755615 0.501916294739981 2.43099799706939 Q09666 AHNAK Q09666.S4960.p_AHNAK Q09666_S4960s _1_1_4960_4960 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25094.25094.4 17.89 17.89 8.032 2 1 1 0 754.6254 2935.5123 S4960s TMT10 4949 (K) VEAPSLDVHMDsPDINIEGPDVK (I) VEAPS(0.0)LDVHMDS(0.99)PDINIEGPDVK K:TMT10,s:Phosphorylated S AHNAK 629603.7 6 111 1.1 4313.36 HUMAN 1 1.969 12.5611 SLEASEGSIKLPKMK-p Q09666;S5400-p SLEASEGSIKLPKMK 0.120014369208718 0.412509490707116 -0.48 0.216333333333333 19.1627723480119 5.11455106296545 -0.48 0.216333333333333 0.0121261452271267 0.307995870522135 -3.70153140730355 1.12477756510934 Q09666 AHNAK Q09666.S5400.p_AHNAK Q09666_S5397sS5400s_2_2_5397_5400 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27973.27973.4 15.1 15.1 1.969 4 2 2 0 736.8994 2784.6326 S5397s S5400s TMT10 5385 (K) VSVGAPDLSLEAsEGsIKLPK (M) VS(0.0)VGAPDLS(0.0)LEAS(0.99)EGS(0.99)IKLPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 179 1.1 4313.36 HUMAN 1 -19.1628 5.1146 SLEDTEPSDSGDEMM-p Q9NXX6;S61-p SLEDTEPSDSGDEMM 0.384869987732766 0.0246924727317736 0.116833333333333 0.309833333333333 7.67596460104738 21.880041243706 0.116833333333333 0.309833333333333 0.170766839180862 0.00648628273681613 1.57889342955703 4.29004685481641 Q9NXX6 NSMCE4A Q9NXX6.S61.p_NSMCE4A Q9NXX6_S61sS63s_2_2_61_63 Q9NXX6 Q9NXX6|Q9NXX6-2 Non-structural maintenance of chromosomes element 4 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26254.26254.4 23.96 23.96 3.884 5 2 2 0 1081.6915 4163.8165 S61s S63s TMT10 48 (R) EAPERPSLEDTEPsDsGDEMMDPASLEAEADQGLCR (Q) EAPERPS(0.0)LEDT(0.0)EPS(0.99)DS(0.99)GDEMMDPAS(0.0)LEAEADQGLCR C:Carbamidomethylation,s:Phosphorylated S NSMCE4A 44414.7 2 4 3661.1 45.81 HUMAN 2 7.676 21.88 SLEEDEGSDFITENR-p Q9NUQ3;S86-p SLEEDEGSDFITENR 0.0963882658412096 0.0434884394351426 0.323333333333333 -0.282666666666667 21.5422432024521 18.2454139195685 0.323333333333333 -0.282666666666667 0.00701093078771781 0.0149781649159449 4.21802961405229 -3.50918131052111 Q9NUQ3 TXLNG Q9NUQ3.S86.p_TXLNG Q9NUQ3_S86s _1_1_86_86 Q9NUQ3 Q9NUQ3 Gamma-taxilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13070.13070.3 12.35 12.35 5.284 3 1 1 0 729.6511 2106.9777 S86s TMT10 78 (K) HSLEEDEGsDFITENR (N) HS(0.0)LEEDEGS(0.99)DFIT(0.0)ENR s:Phosphorylated S TXLNG 61098.1 1 1 3174.1 58.72 HUMAN 1 21.5422 -18.2454 SLEEKNESLTEHPRS-p Q99590;S687-p SLEEKNESLTEHPRS 0.326106298508116 0.089337615562597 0.239666666666667 -0.189 9.11358391357026 13.8803237404923 0.239666666666667 -0.189 0.122642673348716 0.0409230152939159 1.82802671071923 -2.66938718786522 Q99590 SCAF11 Q99590.S687.p_SCAF11 Q99590_S687s _1_1_687_687 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8541.8541.4 14.92 14.92 1.692 3 1 1 0 552.5334 2127.1446 S687s TMT10 680 (K) SLEEKNEsLTEHPR (S) S(0.0)LEEKNES(0.99)LT(0.0)EHPR K:TMT10,s:Phosphorylated S SCAF11 166418 3 12 120.1 549.85 HUMAN 1 9.1136 -13.8803 SLEGDHSTPPSAYGS-p P07355;T19-p SLEGDHSTPPSAYGS 0.431193631119531 0.0869288534593241 0.118666666666667 0.224333333333333 6.7250918932293 14.0446411317473 0.118666666666667 0.224333333333333 0.212564536779007 0.039403598646592 1.41280088672955 2.69949273379432 P07355 ANXA2 P07355.T19.p_ANXA2 P07355_T19t _1_1_19_19 P07355 P07355-2|A6NMY6|H0YMU9|H0YLV6|H0YKN4 Annexin A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17939.17939.3 16.73 16.73 1.111 6 1 1 0 795.0681 2303.2283 T19t TMT10 11 (K) LSLEGDHStPPSAYGSVK (A) LS(0.0)LEGDHS(0.0)T(0.99)PPS(0.0)AY(0.0)GS(0.0)VK K:TMT10,t:Phosphorylated T ANXA2 38831.6 6 3 537.1 277.57 HUMAN 1 6.7251 14.0446 SLEGEKLSPKSDISP-p P46821;S1779-p SLEGEKLSPKSDISP 0.901186878444473 0.131551413007147 0.0266666666666667 0.205333333333333 0.886555898292967 11.6137305080998 0.0266666666666667 0.205333333333333 0.815350628246429 0.0689647155375183 0.245174981671219 2.26291591141166 P46821 MAP1B P46821.S1779.p_MAP1B P46821_S1779s _1_1_1779_1779 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16098.16098.3 14.33 8.01 4.843 2 1 1 0 694.7307 2002.2152 S1779s TMT10 1770 (K) VQSLEGEKLsPK (S) VQS(0.0)LEGEKLS(0.99)PK K:TMT10,s:Phosphorylated S MAP1B 271827.6 2 16 210.1 442.48 HUMAN 1 0.8866 11.6137 SLEHKTQTPPVEENV-p Q6P1Q9;T154-p SLEHKTQTPPVEENV 0.29470932998648 0.0843144751960144 0.146666666666667 -0.242666666666667 10.0136841153561 14.2193287753293 0.146666666666667 -0.242666666666667 0.0996854074822436 0.0378501079503686 1.98408795706478 -2.73160738093945 Q6P1Q9 METTL2B Q6P1Q9.T154.p_METTL2B Q6P1Q9_T154t _1_1_154_154 Q6P1Q9 Q6P1Q9|Q6P1Q9-2 Methyltransferase-like protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11176.11176.4 15.79 10.31 2.231 4 1 1 0 708.884 2752.5448 T154t TMT10 147 (K) SLEHKTQtPPVEENVTQK (I) S(0.0)LEHKT(0.0)QT(0.99)PPVEENVT(0.0)QK K:TMT10,t:Phosphorylated T METTL2B 44167 1 2 5068.1 23.37 HUMAN 1 10.0137 -14.2193 SLEIDLDSMRNLKAS-p P05783;S312-p SLEIDLDSMRNLKAS 0.765963295929894 0.0488021781575391 -0.046 0.265333333333333 2.22377922305451 17.5432748843101 -0.046 0.265333333333333 0.599269366129031 0.0176064789399354 -0.557808398694263 3.367746164336 P05783 KRT18 P05783.S312.p_KRT18 P05783_S312s _1_1_312_312 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25483.25483.4 16.37 16.37 7.383 3 1 1 0 600.8193 2320.2947 S312s TMT10 302 (R) TVQSLEIDLDsMRNLK (A) T(0.0)VQS(0.0)LEIDLDS(0.99)MRNLK K:TMT10,s:Phosphorylated S KRT18 48057 6 22 89.1 623.62 HUMAN 1 -2.2238 17.5433 SLEMATFSP______-p A7E2V4-4;S1841-p SLEMATFSP______ 0.782324670594102 0.349411321950526 0.06 -0.123333333333333 2.04712817125382 6.05547000383767 0.06 -0.123333333333333 0.624147424654657 0.248000753084449 0.519213799130709 -1.29412855854784 A7E2V4 ZSWIM8 A7E2V4.4.S1841.p_ZSWIM8 A7E2V4-4_S1841s _1_1_1841_1841 A7E2V4-4 A7E2V4-4|A7E2V4-3|S4R410|A7E2V4-5|S4R393 Isoform 4 of Zinc finger SWIM domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29241.29241.2 10.64 10.64 2.028 3 1 1 0 695.8294 1310.6864 S1841s TMT10 1833 (R) VSLEMATFsP (-) VS(0.0)LEMAT(0.0)FS(0.99)P s:Phosphorylated S ZSWIM8 199945.4 1 13 805.1 222.5 HUMAN 1 2.0471 -6.0555 SLEMRTKSYPRYPLE-p Q92613;S592-p SLEMRTKSYPRYPLE 0.0869330223051714 0.0443495965553124 -0.424 0.515 22.6200794944096 18.1163974653268 -0.424 0.515 0.00547005950260873 0.0154297984602943 -4.46518445927921 3.48298558387966 Q92613 JADE3 Q92613.S592.p_JADE3 Q92613_S592s _1_1_592_592 Q92613 Q92613 Protein Jade-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14795.14795.3 11.12 11.12 11.121 4 1 1 0 593.3148 1697.9627 S592s TMT10 592 (K) sYPRYPLESK (N) S(0.99)Y(0.0)PRY(0.0)PLES(0.0)K K:TMT10,s:Phosphorylated S JADE3 95461.1 2 3 1439.1 142.43 HUMAN 1 -22.6201 18.1164 SLERLPNSIASRFRL-p Q9ULT0-4;S182-p SLERLPNSIASRFRL 0.744487889778061 0.300754368148205 -0.0816666666666667 0.143 2.43124259948902 6.88820099996663 -0.0816666666666667 0.143 0.571315149104819 0.204729252145333 -0.602319076744882 1.44103707887272 Q9ULT0 TTC7A Q9ULT0.4.S182.p_TTC7A Q9ULT0-4_S182s _1_1_182_182 Q9ULT0-4 Q9ULT0-4|G5E9G4 Isoform 3 of Tetratricopeptide repeat protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18380.18380.3 14.97 14.97 2.493 3 1 1 0 607.998 1742.0122 S182s TMT10 173 (K) GLSLERLPNsIASR (F) GLS(0.0)LERLPNS(0.99)IAS(0.0)R s:Phosphorylated S TTC7A 99850 4 2 1883.1 109.27 HUMAN 1 -2.4312 6.8882 SLESRRPSSPLIDIK-p Q9BSW7;S118-p SLESRRPSSPLIDIK 0.218544112853148 0.035438870739653 0.193666666666667 0.517333333333333 12.7283471516026 19.5233208881525 0.193666666666667 0.517333333333333 0.0533537911996264 0.011160095504888 2.46222981955633 3.7739639614106 Q9BSW7 SYT17 Q9BSW7.S118.p_SYT17 Q9BSW7_S118sS119s_2_2_118_119 Q9BSW7 Q9BSW7|H3BN78|H3BRH9|H3BQZ6 Synaptotagmin-17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32855.32855.4 11.37 9.74 10.237 3 2 2 0 754.4225 2854.7373 S118s S119s TMT10 116 (R) RPssPLIDIKPIEFGVLSAK (K) RPS(0.99)S(0.99)PLIDIKPIEFGVLS(0.0)AK K:TMT10,s:Phosphorylated S SYT17 54475.7 1 2 5570.1 18.12 HUMAN 1 12.7283 19.5233 SLETLRNSSPEDLFD-p Q13426;S327-p SLETLRNSSPEDLFD 0.362971528924294 0.114060155754848 0.130666666666667 0.196666666666667 8.17248705660533 12.4340831768688 0.130666666666667 0.196666666666667 0.152318023054057 0.0570941592833375 1.66506994178806 2.40832090497522 Q13426 XRCC4 Q13426.S327.p_XRCC4 Q13426_S327sS328s_2_2_327_328 Q13426 Q13426|Q13426-2 DNA repair protein XRCC4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32381.33009.3 8.62 8.62 2.592 5 2 2 0 1089.1443 3105.4884 S327s S328s TMT10 312 (K) EHISAENMSLETLRNssPEDLFDEI (-) EHIS(0.0)AENMS(0.0)LET(0.0)LRNS(0.99)S(0.99)PEDLFDEI s:Phosphorylated S XRCC4 38571.3 3 4 3571.1 48.01 HUMAN 1 8.1725 12.4341 SLFSDGDSSESEDTL-p Q8IV63;S82-p SLFSDGDSSESEDTL 0.805930071607606 0.171345970800116 0.0373333333333333 0.146666666666667 1.80645143568372 10.0726604249294 0.0373333333333333 0.146666666666667 0.659712717852838 0.0983408499440009 0.465499506290497 1.99352416740347 Q8IV63 VRK3 Q8IV63.S82.p_VRK3 Q8IV63_S82sS83s_2_2_82_83 Q8IV63 Q8IV63|Q8IV63-2|M0QYA8|M0QYG0 Inactive serine/threonine-protein kinase VRK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28143.28625.3 15.96 15.96 1.363 9 2 2 0 879.6999 2477.1365 S82s S83s TMT10 74 (R) LSLFSDGDssESEDTLSSSER (S) LS(0.0)LFS(0.0)DGDS(0.99)S(0.99)ES(0.0)EDT(0.0)LS(0.0)S(0.0)S(0.0)ER s:Phosphorylated S VRK3 53622 1 9 387.2 332.82 HUMAN 1 1.8065 10.0727 SLFTSQPSGEAEAPQ-p Q9H792;S826-p SLFTSQPSGEAEAPQ 0.951125463979824 0.992479875885763 0.0103333333333333 -0.000999999999999982 0.4301292999539 0.0470847015476492 0.0103333333333333 -0.000999999999999981 0.905705635453071 0.989216905716593 0.124113384363727 -0.0141493188103275 Q9H792 PEAK1 Q9H792.S826.p_PEAK1 Q9H792_S826s _1_1_826_826 Q9H792 Q9H792 Pseudopodium-enriched atypical kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18531.18531.4 14.12 14.12 2.031 9 1 1 0 730.3591 2838.4409 S826s TMT10 819 (K) SLFTSQPsGEAEAPQTTDSPTTK (V) S(0.0)LFT(0.0)S(0.0)QPS(0.99)GEAEAPQT(0.0)T(0.0)DS(0.0)PT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S PEAK1 195156.9 1 9 583.1 265.81 HUMAN 1 0.4301 -0.0471 SLGATSASFNFGKKV-p Q9UKX7;S270-p SLGATSASFNFGKKV 0.705165098884978 0.0369032041877839 -0.064 -0.443666666666667 2.85287135192846 19.2701172335046 -0.064 -0.443666666666667 0.518457145980304 0.0118300962111823 -0.690367032107963 -3.72071038348439 Q9UKX7 NUP50 Q9UKX7.S270.p_NUP50 Q9UKX7_S270s _1_1_270_270 Q9UKX7 Q9UKX7|Q9UKX7-2 Nuclear pore complex protein Nup50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19512.19512.4 14.75 14.75 1.108 6 1 1 0 646.3442 2502.3807 S270s TMT10 258 (K) KTDPSSLGATSAsFNFGK (K) KT(0.0)DPS(0.0)S(0.0)LGAT(0.0)S(0.0)AS(0.99)FNFGK K:TMT10,s:Phosphorylated S NUP50 50542.6 1 3 2469.1 82.07 HUMAN 1 -2.8529 -19.2701 SLGDRSKSVPGLNVD-p Q96C24;S296-p SLGDRSKSVPGLNVD 0.145152146047681 0.0140130410445387 0.281666666666667 0.449666666666667 17.1026217747741 25.7125668901464 0.281666666666667 0.449666666666667 0.0194866786119216 0.00268375774634678 3.282874443081 5.21978328722613 Q96C24 SYTL4 Q96C24.S296.p_SYTL4 Q96C24_S296s _1_1_296_296 Q96C24 Q96C24|Q96C24-2 Synaptotagmin-like protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28126.28126.3 13.09 13.09 99 1 1 1 0 1065.1704 3113.5237 S296s TMT10 296 (K) sVPGLNVDMEEEEEEEDIDHLVK (L) S(1.0)VPGLNVDMEEEEEEEDIDHLVK K:TMT10,s:Phosphorylated S SYTL4 76649.8 7 6 1078.1 180.34 HUMAN 1 17.1026 25.7126 SLGEGHLSVKGSGGE-p Q09666;S5589-p SLGEGHLSVKGSGGE 0.654095329364309 0.0656201451126223 0.07 0.270666666666667 3.45616732005774 15.7415970764374 0.07 0.270666666666667 0.45121472911957 0.0266587813304515 0.811635233369689 3.01664095161107 Q09666 AHNAK Q09666.S5589.p_AHNAK Q09666_S5589s _1_1_5589_5589 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21719.21719.5 23.59 22.97 1.633 4 1 1 0 644.3549 3137.7773 S5589s TMT10 5566 (K) IKGGADVSGGVSAPDISLGEGHLsVK (G) IKGGADVS(0.0)GGVS(0.0)APDIS(0.0)LGEGHLS(0.99)VK K:TMT10,s:Phosphorylated S AHNAK 629603.7 4 148 1.1 4313.36 HUMAN 1 3.4562 15.7416 SLGGDVASDGDFLIF-p O00267;S354-p SLGGDVASDGDFLIF 0.526493980821254 0.126427538931054 0.0836666666666667 0.172666666666667 5.15497630863408 11.8419284808756 0.0836666666666667 0.172666666666667 0.305142267502926 0.0654345547973551 1.13238395630969 2.30319669458808 O00267 SUPT5H O00267.S354.p_SUPT5H O00267_S354s _1_1_354_354 O00267 O00267|O00267-2 Transcription elongation factor SPT5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.29282.29282.3 15.48 14.41 6.339 2 1 1 0 760.0262 2198.0927 S354s TMT10 347 (R) SLGGDVAsDGDFLIFEGNR (Y) S(0.0)LGGDVAS(0.99)DGDFLIFEGNR s:Phosphorylated S SUPT5H 121396.8 1 3 1946.1 105.81 HUMAN 1 5.155 11.8419 SLGGKVVTPLHINLS-p Q8TDM6;T718-p SLGGKVVTPLHINLS 0.73696254035752 0.0335797701165508 -0.0476666666666667 -0.354333333333333 2.51035827247177 19.8660161691317 -0.0476666666666667 -0.354333333333333 0.561001694128681 0.010313317385665 -0.619076642205372 -3.84668605806457 Q8TDM6 DLG5 Q8TDM6.T718.p_DLG5 Q8TDM6_S711sT718t_2_2_711_718 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23138.23138.4 12.55 12.55 3.191 3 2 2 0 674.6283 2535.559 S711s T718t TMT10 711 (K) sLGGKVVtPLHINLSGQK (D) S(0.99)LGGKVVT(0.99)PLHINLS(0.0)GQK K:TMT10,s:Phosphorylated S,t:Phosphorylated T DLG5 215575.4 1 42 34.1 890.58 HUMAN 1 -2.5104 -19.866 SLGGLRLSEEQEEDE-p A0A1B0GV68;S794-p SLGGLRLSEEQEEDE 0.217250444611228 0.0316359987498557 -0.196666666666667 0.27 12.7756515075043 20.2583294143639 -0.196666666666667 0.27 0.0527758029144619 0.0094225197964602 -2.47071802633283 3.93087220186487 A0A1B0GV68 NotFound A0A1B0GV68.S794.p_NotFound A0A1B0GV68_S794s _1_1_794_794 A0A1B0GV68 A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17509.17509.2 8.23 8.23 3.774 2 1 1 0 1028.9677 1976.961 S794s TMT10 786 (R) GSLGGLRLsEEQEEDE (-) GS(0.0)LGGLRLS(0.99)EEQEEDE s:Phosphorylated S FARP1 88555.5 1 23 147.1 514.5 HUMAN 1 -12.7757 20.2583 SLGGQQGSPKHGPHS-p A0A087WWK8;S403-p SLGGQQGSPKHGPHS 0.154754532748189 0.0107770897420086 -0.306 -0.496333333333333 16.2855510130171 27.5772673611714 -0.306 -0.496333333333333 0.0235204105822274 0.00174692099318006 -3.1232128424296 -5.71943789237122 A0A087WWK8 IQSEC1 A0A087WWK8.S403.p_IQSEC1 A0A087WWK8_S403s _1_1_403_403 A0A087WWK8 A0A087WWK8|Q6DN90|Q6DN90-2|A0A0C4DGT3 IQ motif and SEC7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7693.7693.2 14.76 9.07 8.901 2 1 1 0 748.897 1416.8211 S403s TMT10 396 (R) SLGGQQGsPK (H) S(0.0)LGGQQGS(0.99)PK K:TMT10,s:Phosphorylated S IQSEC1 125330.2 5 6 768.1 228.42 HUMAN 1 -16.2856 -27.5773 SLGKDTTSPMELAAL-p Q6VY07-2;S430-p SLGKDTTSPMELAAL 0.843642878291984 0.00329742944023503 -0.03 -0.718 1.42962158204562 37.1581217268096 -0.03 -0.718 0.719511669169128 0.000192392362362542 -0.378424330192936 -8.92371366268813 Q6VY07 PACS1 Q6VY07.2.S430.p_PACS1 Q6VY07-2_S430s _1_1_430_430 Q6VY07-2 Q6VY07-2 Isoform 2 of Phosphofurin acidic cluster sorting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22783.22783.4 12.06 11.8 1.131 4 1 1 0 654.6055 2535.4307 S430s TMT10 422 (K) GSLGKDTTsPMELAALEK (I) GS(0.0)LGKDT(0.0)T(0.0)S(0.99)PMELAALEK K:TMT10,s:Phosphorylated S PACS1 109968.1 7 6 786.1 225.23 HUMAN 1 -1.4296 -37.1581 SLGPKTQSVEITKTD-p Q9Y5K6;S256-p SLGPKTQSVEITKTD 0.263930779322743 0.033743433274078 -0.199666666666667 -0.277 10.9728782394644 19.8401954223049 -0.199666666666667 -0.277 0.0799304349163999 0.0103748173052931 -2.15135850776994 -3.84118046778145 Q9Y5K6 CD2AP Q9Y5K6.S256.p_CD2AP Q9Y5K6_S256s _1_1_256_256 Q9Y5K6 Q9Y5K6 CD2-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11739.11739.3 16.51 16.51 2.154 5 1 1 0 768.748 2224.264 S256s TMT10 254 (K) TQsVEITKTDTEGK (I) T(0.0)QS(0.99)VEIT(0.0)KT(0.0)DT(0.0)EGK K:TMT10,s:Phosphorylated S CD2AP 71678 4 4 413.1 321.76 HUMAN 1 -10.9729 -19.8402 SLGTARGSPEEELPL-p Q5JTD0;S300-p SLGTARGSPEEELPL 0.476389852828649 0.419120613258458 0.115666666666667 0.102 5.92844118128911 5.02665991232802 0.115666666666667 0.102 0.255361771144252 0.31429249366616 1.27180547514493 1.10871634792789 Q5JTD0 TJAP1 Q5JTD0.S300.p_TJAP1 Q5JTD0_S300s _1_1_300_300 Q5JTD0 Q5JTD0|Q5JTD0-2|Q5JTD0-4 Tight junction-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27841.27841.3 18.17 18.17 99 1 1 1 0 694.3574 2001.0945 S300s TMT10 299 (R) GsPEEELPLPAFEK (L) GS(1.0)PEEELPLPAFEK K:TMT10,s:Phosphorylated S TJAP1 62162.4 6 3 1364.1 149.81 HUMAN 1 5.9284 5.0267 SLHEKASTPVLKSST-p Q04724;T312-p SLHEKASTPVLKSST 0.689586040425026 0.0232121000687203 0.056 0.543333333333333 3.02455299011144 22.3083445750693 0.056 0.543333333333333 0.498361748624394 0.00587713331866359 0.725394890048146 4.38807392656572 Q04724 TLE1 Q04724.T312.p_TLE1 Q04724_T312t _1_1_312_312 Q04724 Q04724 Transducin-like enhancer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12092.12295.2 8.87 1.14 1.342 2 1 1 0 627.3666 1173.7607 T312t TMT10 310 (K) AStPVLK (S) AS(0.0)T(0.99)PVLK K:TMT10,t:Phosphorylated T TLE1 84112.2 1 3 3332.1 53.66 HUMAN 1 3.0246 22.3083 SLHINNISPGNTISR-p Q8IZ41;S377-p SLHINNISPGNTISR 0.221373736351063 0.344181187663868 0.246 0.098 12.611468544367 6.13601846127682 0.246 0.098 0.0548091599238027 0.243443483521374 2.44128563344997 1.30844023147028 Q8IZ41 RASEF Q8IZ41.S377.p_RASEF Q8IZ41_S377s _1_1_377_377 Q8IZ41 Q8IZ41 Ras and EF-hand domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14665.14665.3 16.96 16.96 4.009 4 1 1 0 644.6685 1852.0238 S377s TMT10 370 (R) SLHINNIsPGNTISR (S) S(0.0)LHINNIS(0.99)PGNT(0.0)IS(0.0)R s:Phosphorylated S RASEF 83619.4 3 3 1851.1 111.08 HUMAN 1 12.6115 6.136 SLHKEDPSESEEEQI-p O15018;S1592-p SLHKEDPSESEEEQI 0.420320976430283 0.0421918828246993 0.151 -0.262333333333333 6.94683787301899 18.4165607904774 0.151 -0.262333333333333 0.201983648478025 0.0143993842455924 1.45170421806026 -3.54407876973659 O15018 PDZD2 O15018.S1592.p_PDZD2 O15018_S1592sS1594s_2_2_1592_1594 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15983.15983.3 16.48 11.3 4.114 5 2 2 0 1074.1572 3060.5196 S1592s S1594s TMT10 1584 (R) VSLHKEDPsEsEEEQIEICSTR (G) VS(0.0)LHKEDPS(0.99)ES(0.99)EEEQIEICS(0.0)T(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PDZD2 304146 2 42 85.1 628.64 HUMAN 1 6.9468 -18.4166 SLHREYGSTSSIDKQ-p O43166;S208-p SLHREYGSTSSIDKQ 0.714776389363648 0.0320825732477169 -0.0533333333333333 -0.268666666666667 2.748841865177 20.1654542114799 -0.0533333333333334 -0.268666666666667 0.531026034275074 0.00962619331146999 -0.668920670485351 -3.91085068425312 O43166 SIPA1L1 O43166.S208.p_SIPA1L1 O43166_S208s _1_1_208_208 O43166 O43166|O43166-2|O43166-3 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30537.30537.3 17.33 11.57 1.137 8 1 1 0 1088.5525 3183.6665 S208s TMT10 205 (R) EYGsTSSIDKQGTSGESFFDLLK (G) EY(0.0)GS(0.99)T(0.0)S(0.0)S(0.0)IDKQGT(0.0)S(0.0)GES(0.0)FFDLLK K:TMT10,s:Phosphorylated S SIPA1L1 201223.1 11 5 46.1 777.88 HUMAN 1 -2.7488 -20.1655 SLHRQMGSDRDLQSS-p Q9NV58;S40-p SLHRQMGSDRDLQSS 0.822556582247602 0.119736570141193 0.0366666666666667 -0.189333333333333 1.63163325396293 12.1537635941411 0.0366666666666667 -0.189333333333333 0.686810102337732 0.0609008901636568 0.425585796382168 -2.35844344279843 Q9NV58 RNF19A Q9NV58.S40.p_RNF19A Q9NV58_S40s _1_1_40_40 Q9NV58 Q9NV58|Q9NV58-3|Q9NV58-2|A3KCU8 E3 ubiquitin-protein ligase RNF19A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18093.18093.3 11.08 6.83 1.125 7 1 1 0 906.4592 2637.3918 S40s TMT10 37 (R) QMGsDRDLQSSASSVSLPSVK (K) QMGS(0.99)DRDLQS(0.0)S(0.0)AS(0.0)S(0.0)VS(0.0)LPS(0.0)VK K:TMT10,s:Phosphorylated S RNF19A 92691.7 2 1 2862.1 67.91 HUMAN 1 1.6316 -12.1538 SLHTRTRSLDFREIG-p Q9H1K0;S548-p SLHTRTRSLDFREIG 0.535204694146268 0.726135028831451 0.0976666666666667 0.0556666666666667 5.02502422562365 1.91236771204427 0.0976666666666667 0.0556666666666667 0.314410888188009 0.643818169264392 1.10864196670415 0.489250678940196 Q9H1K0 RBSN Q9H1K0.S548.p_RBSN Q9H1K0_S548s _1_1_548_548 Q9H1K0 Q9H1K0 Rabenosyn-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23071.23071.4 21.93 21.93 21.926 2 1 1 0 589.0394 2273.1673 S548s Hydrogen 548 (R) sLDFREIGPFQLEPSREPR (T) S(0.99)LDFREIGPFQLEPS(0.0)REPR s:Phosphorylated S RBSN 89666.9 7 5 972.1 193.2 HUMAN 1 5.025 1.9124 SLIGGNASAEGPEGE-p A0A0B4J2C3;S53-p SLIGGNASAEGPEGE 0.767860162181217 0.09174904714775 -0.05 -0.231666666666667 2.19804929597837 13.720684045674 -0.05 -0.231666666666667 0.602830296266354 0.0424552688516306 -0.552228100182636 -2.64023162948338 A0A0B4J2C3 TPT1 A0A0B4J2C3.S53.p_TPT1 A0A0B4J2C3_S53s _1_1_53_53 A0A0B4J2C3 A0A0B4J2C3|Q5W0H4|P13693|J3KPG2|P13693-2 Translationally-controlled tumor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30561.30592.5 34.05 34.05 4.552 10 1 1 0 1079.917 5315.5902 S53s TMT10 39 (R) TEGNIDDSLIGGNAsAEGPEGEGTESTVITGVDIVMNHHLQETSFTK (E) T(0.0)EGNIDDS(0.0)LIGGNAS(0.99)AEGPEGEGT(0.0)ES(0.0)T(0.0)VIT(0.0)GVDIVMNHHLQET(0.0)S(0.0)FT(0.0)K K:TMT10,s:Phosphorylated S TPT1 22801.7 3 2 4296.1 34.05 HUMAN 1 -2.198 -13.7207 SLINSRSSPPASPTI-p P80192-4;S548-p SLINSRSSPPASPTI 0.902785380781038 0.865002384950298 -0.0263333333333333 0.0196666666666667 0.872343473279883 0.888036064710173 -0.0263333333333333 0.0196666666666667 0.818023259853859 0.815072787050841 -0.241543298127012 0.24552890748396 P80192 MAP3K9 P80192.4.S548.p_MAP3K9 P80192-4_S548s _1_1_548_548 P80192-4 P80192-4|J3KPI6|A0A087WW79|G3V347|G3V4P9 Isoform 2 of Mitogen-activated protein kinase kinase kinase 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17760.17760.3 13.03 4.98 1.366 6 1 1 0 734.7338 2122.2182 S548s TMT10 541 (K) SLINSRSsPPASPTIIPR (L) S(0.0)LINS(0.0)RS(0.0)S(0.99)PPAS(0.0)PT(0.0)IIPR s:Phosphorylated S MAP3K9 124398 2 2 3610.1 47.07 HUMAN 1 -0.8723 0.888 SLIPRPKSPNMQDLK-p Q9BPW5;S224-p SLIPRPKSPNMQDLK 0.161645700630594 0.091750458035977 -0.237666666666667 -0.188 15.8406614098159 13.7202266915832 -0.237666666666667 -0.188 0.0260575667544492 0.0424597400374574 -3.03765503672123 -2.64014823075476 Q9BPW5 RASL11B Q9BPW5.S224.p_RASL11B Q9BPW5_S224s _1_1_224_224 Q9BPW5 Q9BPW5 Ras-like protein family member 11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18545.18545.4 13.56 8.89 3.645 3 1 1 0 648.8696 2512.4888 S224s TMT10 216 (R) TSLIPRPKsPNMQDLK (R) T(0.0)S(0.0)LIPRPKS(0.99)PNMQDLK K:TMT10,s:Phosphorylated S RASL11B 27906.6 3 1 6157.1 13.56 HUMAN 1 -15.8407 -13.7202 SLIQREPSSRLRSCS-p Q96PU5;S335-p SLIQREPSSRLRSCS 0.820113805232747 0.0386745972221711 0.0393333333333333 -0.344666666666667 1.65950946145766 18.9689498864652 0.0393333333333333 -0.344666666666667 0.682415769109489 0.0126795841806794 0.432004191122733 -3.65788648853862 Q96PU5 NEDD4L Q96PU5.S335.p_NEDD4L Q96PU5_S335s _1_1_335_335 Q96PU5 A0A1B0GVY1|Q96PU5|Q96PU5-7|Q96PU5-5|Q96PU5-6|Q96PU5-2|Q96PU5-3|Q96PU5-4|Q96PU5-9 E3 ubiquitin-protein ligase NEDD4-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22780.22780.3 12.95 12.95 1.232 6 1 1 0 966.8125 2818.4533 S335s TMT10 315 (R) LQITPDSNGEQFSSLIQREPsSR (L) LQIT(0.0)PDS(0.0)NGEQFS(0.0)S(0.0)LIQREPS(0.99)S(0.0)R s:Phosphorylated S NEDD4L 112272 3 7 495.1 293.21 HUMAN 1 1.6595 -18.9689 SLIRPRPTTAPITIS-p Q52LW3;T856-p SLIRPRPTTAPITIS 0.992500838833107 0.772249621887867 0.00166666666666667 -0.0406666666666666 0.0700789538805962 1.55259231025807 0.00166666666666667 -0.0406666666666666 0.983993216795839 0.699424383917169 0.0210066342379032 -0.407227530226827 Q52LW3 ARHGAP29 Q52LW3.T856.p_ARHGAP29 Q52LW3_S849sT856tT857t_3_3_849_857 Q52LW3 Q52LW3|F8VWZ8 Rho GTPase-activating protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28611.28611.3 7.15 3.98 6.872 8 3 3 0 1337.3389 3769.0962 S849s T856t T857t N870n TMT10 841 (K) NLGVIFGPsLIRPRPttAPITISSLAEYSnQAR (L) N(0.0)LGVIFGPS(0.99)LIRPRPT(0.99)T(0.99)APIT(0.0)IS(0.0)S(0.0)LAEY(0.0)S(0.0)N(0.99)QAR s:Phosphorylated S,t:Phosphorylated T,n:Deamidated ARHGAP29 143601.5 1 20 517.1 284.75 HUMAN 1 0.0701 -1.5526 SLITPHVSRSSTPRE-p P49792;S2454-p SLITPHVSRSSTPRE 0.295154464069677 0.423255625183961 0.463666666666667 -0.146 9.98501409548582 4.97126740790646 0.463666666666667 -0.146 0.100345659231827 0.318326840830852 1.9791070011252 -1.09856910154061 P49792 RANBP2 P49792.S2454.p_RANBP2 P49792_S2454s _1_1_2454_2454 P49792 P49792|Q99666|O14715|J3KNE0|A6NKT7 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11531.11531.2 10.81 10.81 3.261 3 1 1 0 717.3701 1353.7688 S2454s TMT10 2446 (K) DSLITPHVsR (S) DS(0.0)LIT(0.0)PHVS(0.99)R s:Phosphorylated S RANBP2 362585.9 1 51 9.1 1298.62 HUMAN 1 9.985 -4.9713 SLIVPGKSPTRKKSG-p J3KPC5;S515-p SLIVPGKSPTRKKSG 0.989624159550082 0.0200981637570064 -0.00233333333333334 -0.394666666666667 0.0925390461965693 23.2530033148177 -0.00233333333333334 -0.394666666666667 0.9789175066921 0.00472824169621529 -0.0276695560579423 -4.60925727457331 J3KPC5 NotFound J3KPC5.S515.p_NotFound J3KPC5_S515s _1_1_515_515 J3KPC5 P47736-4|J3KPC5|P47736-3|F2Z357 RAP1, GTPase activating protein 1, isoform CRA_e HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21108.21108.4 17.31 14.37 1.155 3 1 1 0 502.046 1925.1948 S515s TMT10 504 (K) AAGISLIVPGKsPTR (K) AAGIS(0.0)LIVPGKS(0.99)PT(0.0)R K:TMT10,s:Phosphorylated S RAP1GAP 77232.3 4 2 3303.1 54.4 HUMAN 1 -0.0925 -23.253 SLKEEDESDDDNM__-p P25788;S250-p SLKEEDESDDDNM__ 0.561099518094358 0.48190388588484 0.0896666666666667 0.0666666666666667 4.6215835350887 4.23178726862177 0.0896666666666667 0.0666666666666667 0.345017915127842 0.377416839172117 1.03423121291058 0.961014897322858 P25788 PSMA3 P25788.S250.p_PSMA3 P25788_S250s _1_1_250_250 P25788 P25788|P25788-2|G3V4X5 Proteasome subunit alpha type-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12353.12766.2 12.87 12.87 10.199 2 1 1 0 1097.461 2113.9483 S250s TMT10 242 (K) ESLKEEDEsDDDNM (-) ES(0.0)LKEEDES(0.99)DDDNM K:TMT10,s:Phosphorylated S PSMA3 28660.9 33 3 4012.1 39.1 HUMAN 1 4.6216 4.2318 SLKEKKLSPGDRVGY-p P31629;S629-p SLKEKKLSPGDRVGY 0.144175666768838 0.00447115521927803 -0.277666666666667 -0.572333333333333 17.1688370667181 34.502040010062 -0.277666666666667 -0.572333333333333 0.0191918258153093 0.000354646761993217 -3.29596302610694 -7.9126847795894 P31629 HIVEP2 P31629.S629.p_HIVEP2 P31629_S629s _1_1_629_629 P31629 P31629 Transcription factor HIVEP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13319.13319.3 10.84 10.84 9.42 3 1 1 0 813.4037 2358.2276 S629s TMT10 627 (K) KLsPGDRVGYDYDVCR (K) KLS(0.99)PGDRVGY(0.0)DY(0.0)DVCR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S HIVEP2 271273.5 2 6 465.2 303.46 HUMAN 1 -17.1688 -34.502 SLKERVKSLQADTTN-p X6RLX0;S603-p SLKERVKSLQADTTN 0.0171093022974706 0.0127979790415235 -0.917333333333333 -0.434 41.3462836176008 26.3770861751858 -0.917333333333334 -0.434 7.33451900492728e-05 0.00230298644868899 -10.7798112526146 -5.39399962340759 X6RLX0 ERC1 X6RLX0.S603.p_ERC1 X6RLX0_S603s _1_1_603_603 X6RLX0 X6RLX0|Q8IUD2|Q8IUD2-3|G8JLD3|Q8IUD2-2|X6RM00|Q8IUD2-4|Q8IUD2-5 ELKS/Rab6-interacting/CAST family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36497.36497.3 20.29 20.29 3.602 7 1 1 0 992.1686 2894.5246 S603s TMT10 603 (K) sLQADTTNTDTALTTLEEALAEK (E) S(0.99)LQADT(0.0)T(0.0)NT(0.0)DT(0.0)ALT(0.0)T(0.0)LEEALAEK K:TMT10,s:Phosphorylated S ERC1 128700.8 2 9 904.1 203.11 HUMAN 1 -41.3463 -26.3771 SLKGNRESDGFREEK-p Q9NYF8;S450-p SLKGNRESDGFREEK 0.86893044003796 0.208198221718993 0.0326666666666667 0.144333333333333 1.19110213490068 8.96658279142239 0.0326666666666667 0.144333333333333 0.760133348906377 0.126864969928399 0.321150540889138 1.80193249051787 Q9NYF8 BCLAF1 Q9NYF8.S450.p_BCLAF1 Q9NYF8_S450s _1_1_450_450 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|A0A1W2PQ43 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5227.5227.4 12.81 12.81 99 1 1 1 0 491.2425 1881.9819 S450s TMT10 446 (K) GNREsDGFREEK (N) GNRES(1.0)DGFREEK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 6 23 10.1 1293.04 HUMAN 1 1.1911 8.9666 SLKGTTVTPDKRKGL-p Q16186;T39-p SLKGTTVTPDKRKGL 0.0756084078669892 0.240505705960235 -0.526 -0.226 24.0068939686856 8.15436780421169 -0.526 -0.226 0.00397475718554779 0.152954838421635 -4.79657146714725 -1.66139182173045 Q16186 ADRM1 Q16186.T39.p_ADRM1 Q16186_T39t _1_1_39_39 Q16186 Q16186|A0A087WX59 Proteasomal ubiquitin receptor ADRM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7775.7775.3 9.52 9.52 2.92 3 1 1 0 452.9111 1276.7513 T39t TMT10 35 (K) GTTVtPDK (R) GT(0.0)T(0.0)VT(0.99)PDK K:TMT10,t:Phosphorylated T ADRM1 42437.8 1 1 3503.1 49.61 HUMAN 1 -24.0069 -8.1544 SLKNRKGSEGAERLQ-p Q5JSZ5;S1754-p SLKNRKGSEGAERLQ 0.603085598910672 0.505881687739408 -0.25 0.359333333333333 4.0562550508884 3.9657865064092 -0.25 0.359333333333334 0.392983661662182 0.401255824335461 -0.927867638781186 0.910430766052169 Q5JSZ5 PRRC2B Q5JSZ5.S1754.p_PRRC2B Q5JSZ5_S1754s _1_1_1754_1754 Q5JSZ5 Q5JSZ5|Q5JSZ5-5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.2731.2895.2 9 3.24 99 1 1 1 0 571.7746 1062.5741 S1754s Hydrogen 1752 (R) KGsEGAER (L) KGS(1.0)EGAER K:TMT10-Lys-Only,s:Phosphorylated S PRRC2B 244103.4 1 81 36.2 882.05 HUMAN 1 -4.0563 3.9658 SLKNRLDSPQIRKTA-p O75044;S916-p SLKNRLDSPQIRKTA 0.198300279868763 0.160756443151667 0.203666666666667 -0.297333333333333 13.6816702127326 10.4420137159225 0.203666666666667 -0.297333333333333 0.0428383740597635 0.090323057097285 2.63465627007949 -2.05774508480561 O75044 SRGAP2 O75044.S916.p_SRGAP2 O75044_S916s _1_1_916_916 O75044 O75044|B7ZM87 SLIT-ROBO Rho GTPase-activating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10917.10917.3 8.37 8.37 99 1 1 1 0 498.9531 1414.8782 S916s TMT10 914 (R) LDsPQIRK (T) LDS(1.0)PQIRK K:TMT10,s:Phosphorylated S SRGAP2 122066.6 5 7 489.1 294.64 HUMAN 1 13.6817 -10.442 SLKPNPASPLPASPY-p Q15654;S142-p SLKPNPASPLPASPY 0.709478018853833 0.150485631664233 -0.0633333333333334 -0.230333333333333 2.80285758868543 10.8197618744276 -0.0633333333333334 -0.230333333333333 0.524462258860617 0.0827987561389475 -0.680077888587619 -2.12362283429803 Q15654 TRIP6 Q15654.S142.p_TRIP6 Q15654_S142s _1_1_142_142 Q15654 Q15654 Thyroid receptor-interacting protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26995.26995.5 27.85 27.85 3.029 12 1 1 0 950.3053 4667.5328 S142s TMT10 133 (R) TGSLKPNPAsPLPASPYGGPTPASYTTASTPAGPAFPVQVK (V) T(0.0)GS(0.0)LKPNPAS(0.99)PLPAS(0.0)PY(0.0)GGPT(0.0)PAS(0.0)Y(0.0)T(0.0)T(0.0)AS(0.0)T(0.0)PAGPAFPVQVK K:TMT10,s:Phosphorylated S TRIP6 51770.4 2 2 2633.1 75.83 HUMAN 1 -2.8029 -10.8198 SLLASKQSPECENFL-p Q12802-2;S1411-p SLLASKQSPECENFL 0.895226148980626 0.384302646849019 -0.0253333333333333 -0.140333333333333 0.941621972885708 5.51920051263669 -0.0253333333333333 -0.140333333333333 0.805077710210107 0.280595013431431 -0.259170120580222 -1.19814699396285 Q12802 AKAP13 Q12802.2.S1411.p_AKAP13 Q12802-2_S1411s_1_1_1411_1411 Q12802-2 Q12802-2|Q12802-4|A8MYJ1|A0A087WTD7 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32669.32669.4 11.9 11.9 1.163 4 1 1 0 1101.5261 4322.0932 S1411s N1416n TMT10 1391 (R) ENWCTIEPCPDAASLLASKQsPECEnFLDVGLGR (E) EN(0.0)WCT(0.0)IEPCPDAAS(0.0)LLAS(0.0)KQS(0.99)PECEN(0.99)FLDVGLGR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated AKAP13 310921 4 10 66.1 683.25 HUMAN 1 -0.9416 -5.5192 SLLDSDDSSDLLDFA-p Q5TGY3;S849-p SLLDSDDSSDLLDFA 0.116602871314905 0.019785565185533 0.535666666666667 0.478666666666667 19.4182625437283 23.3775303783854 0.535666666666667 0.478666666666667 0.0114333565084378 0.00459459210684065 3.75520054096759 4.63894049585554 Q5TGY3 AHDC1 Q5TGY3.S849.p_AHDC1 Q5TGY3_S849s _1_1_849_849 Q5TGY3 Q5TGY3 AT-hook DNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32110.32110.3 15.31 15.31 1.132 7 1 1 0 969.1281 2825.4002 S849s TMT10 842 (R) SLLDSDDsSDLLDFALSASRPESR (K) S(0.0)LLDS(0.0)DDS(0.99)S(0.0)DLLDFALS(0.0)AS(0.0)RPES(0.0)R s:Phosphorylated S AHDC1 170057.9 1 8 334.1 355.89 HUMAN 1 19.4183 23.3775 SLLEERRTPPPTKRS-p Q6P0Q8;T867-p SLLEERRTPPPTKRS 0.0900658455258724 0.00739033881289099 -0.419 -0.462333333333333 22.2620051829923 30.4776670654639 -0.419 -0.462333333333333 0.00594017831052379 0.000895845865035676 -4.38210173083187 -6.56815179800849 Q6P0Q8 MAST2 Q6P0Q8.T867.p_MAST2 Q6P0Q8_T867t _1_1_867_867 Q6P0Q8 Q6P0Q8|Q6P0Q8-2|E7ERL6 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15629.15629.4 16.31 14.38 5.467 3 1 1 0 544.5638 2095.2639 T867t TMT10 859 (R) LSLLEERRtPPPTK (R) LS(0.0)LLEERRT(0.99)PPPT(0.0)K K:TMT10,t:Phosphorylated T MAST2 197687.5 4 48 121.1 549.41 HUMAN 1 -22.262 -30.4777 SLLFHQISPSRDNHY-p A0A0A0MR11;S286-p SLLFHQISPSRDNHY 0.151513441134185 0.466776537445169 0.360333333333333 0.0756666666666667 16.5035514227343 4.41169062179418 0.360333333333333 0.0756666666666667 0.0223689118318945 0.362102011886074 3.1654844956715 0.994869536272514 A0A0A0MR11 ZNF33A A0A0A0MR11.S286.p_ZNF33A A0A0A0MR11_S286s _1_1_286_286 A0A0A0MR11 A0A0A0MR11|Q06730-3|Q06730-2|A0A0A0MRS1 Zinc finger protein 33A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21069.21069.4 17.74 17.74 2 8 1 1 0 978.4527 3830.8154 S286s TMT10 273 (R) TLCDSSSLLFHQIsPSRDNHYEFSDCEK (F) T(0.0)LCDS(0.0)S(0.0)S(0.0)LLFHQIS(0.99)PS(0.0)RDNHY(0.0)EFS(0.0)DCEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF33A 99493.4 1 1 5606.1 17.74 HUMAN 1 16.5036 4.4117 SLLGKRLSEDSSRHQ-p Q9NYP9;S36-p SLLGKRLSEDSSRHQ 0.0613809554565416 0.00840448513471 -0.520666666666667 -0.630333333333333 26.4250017288139 29.4756022098979 -0.520666666666667 -0.630333333333333 0.00227771733515682 0.00112833946666838 -5.41397778910465 -6.26444577301791 Q9NYP9 MIS18A Q9NYP9.S36.p_MIS18A Q9NYP9_S36s _1_1_36_36 Q9NYP9 Q9NYP9 Protein Mis18-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4086.4086.3 9.6 9.6 9.603 3 1 1 0 420.2044 1178.6327 S36s TMT10 34 (K) RLsEDSSR (H) RLS(0.99)EDS(0.0)S(0.0)R s:Phosphorylated S MIS18A 26833 2 2 1982.1 104.28 HUMAN 1 -26.425 -29.4756 SLLGLSNSEPNGSVE-p Q13033-2;S209-p SLLGLSNSEPNGSVE 0.76119081695692 0.621867543902399 0.054 0.052 2.27408322366781 2.80442137434367 0.054 0.052 0.592368119953742 0.524273447131832 0.568679152832729 0.680308227113146 Q13033 STRN3 Q13033.2.S209.p_STRN3 Q13033-2_S209s _1_1_209_209 Q13033-2 Q13033|Q13033-2|G3V340 Isoform Alpha of Striatin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21736.21736.3 19.37 19.37 2.669 5 1 1 0 757.3959 2190.2018 S209s TMT10 202 (R) SLLGLSNsEPNGSVETK (N) S(0.0)LLGLS(0.0)NS(0.99)EPNGS(0.0)VET(0.0)K K:TMT10,s:Phosphorylated S STRN3 78142.7 3 4 1014.1 188.21 HUMAN 1 2.2741 2.8044 SLLGPVTTPEHQLLK-p Q9H0H5;T580-p SLLGPVTTPEHQLLK 0.957246455101486 0.00246432253845191 -0.00800000000000001 -0.719666666666667 0.370835940144982 39.9594670322936 -0.00800000000000001 -0.719666666666667 0.918155850694949 0.00010093767495438 -0.107645131116093 -10.1131450197591 Q9H0H5 RACGAP1 Q9H0H5.T580.p_RACGAP1 Q9H0H5_T580t _1_1_580_580 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25569.25569.2 14.89 13.02 1.127 3 1 1 0 1135.6464 2190.3262 T580t TMT10 572 (K) VSLLGPVTtPEHQLLK (T) VS(0.0)LLGPVT(0.0)T(0.99)PEHQLLK K:TMT10,t:Phosphorylated T RACGAP1 71709.9 5 14 574.1 268.64 HUMAN 1 -0.3708 -39.9595 SLLGRSGSYSYLEER-p O14974;S910-p SLLGRSGSYSYLEER 0.618885857104294 0.951219360688189 -0.0733333333333333 -0.00966666666666668 3.87209014747787 0.310915647648022 -0.0733333333333333 -0.00966666666666667 0.410006729816805 0.930911585415267 -0.89259921167358 -0.0908000822352385 O14974 PPP1R12A O14974.S910.p_PPP1R12A O14974_S910s _1_1_910_910 O14974 O14974|O14974-2|O14974-3 Protein phosphatase 1 regulatory subunit 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12391.12391.2 12.89 6.23 2.125 5 1 1 0 750.3335 1419.6953 S910s TMT10 908 (R) SGsYSYLEER (K) S(0.0)GS(0.99)Y(0.0)S(0.0)Y(0.0)LEER s:Phosphorylated S PPP1R12A 115678 2 12 286.1 385.3 HUMAN 1 -3.8721 -0.3109 SLLHTSRSLSSLNRS-p Q6P0Q8;S1247-p SLLHTSRSLSSLNRS 0.681920528763249 0.0170738521588409 -0.132 -0.779 3.11768106143978 24.3871031110814 -0.132 -0.779 0.487788878053726 0.00364157860560404 -0.744214952624161 -4.88430265364381 Q6P0Q8 MAST2 Q6P0Q8.S1247.p_MAST2 Q6P0Q8_S1247s _1_1_1247_1247 Q6P0Q8 Q6P0Q8|Q6P0Q8-2|Q9Y2H9 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10144.10144.2 9.88 9.88 3.118 3 1 1 0 543.2823 1005.589 S1247s TMT10 1247 (R) sLSSLNR (S) S(0.99)LS(0.0)S(0.0)LNR s:Phosphorylated S MAST2 197687.5 2 56 121.1 549.41 HUMAN 1 -3.1177 -24.3871 SLLKRQGSFSEDVIS-p H3BQK9;S3959-p SLLKRQGSFSEDVIS 0.757201638201782 0.116672149591831 -0.0503333333333333 0.217 2.31218809080236 12.3060420504166 -0.0503333333333333 0.217 0.587193434361988 0.0588025005921326 -0.576879754715112 2.38551234790501 H3BQK9 NotFound H3BQK9.S3959.p_NotFound H3BQK9_S3959s_1_1_3959_3959 H3BQK9 H3BQK9|H3BPE1|Q9UPN3|Q9UPN3-5 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18596.18596.3 14.61 14.61 3.722 3 1 1 0 689.6642 2004.0348 Q3957q S3959s Hydrogen 3957 (R) qGsFSEDVISHKGDLR (F) Q(1.0)GS(0.99)FS(0.0)EDVIS(0.0)HKGDLR K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S MACF1 866539.7 7 4 472.1 301.95 HUMAN 1 -2.3122 12.306 SLLKRVRSMTDVLTM-p Q5T5P2;S809-p SLLKRVRSMTDVLTM 0.37275294026204 0.0121567318783698 -0.151666666666667 0.478333333333333 7.95154952257316 26.7432441087804 -0.151666666666667 0.478333333333333 0.160267346958627 0.00211677934497119 -1.62675459589824 5.49178747412933 Q5T5P2 KIAA1217 Q5T5P2.S809.p_KIAA1217 Q5T5P2_S809s _1_1_809_809 Q5T5P2 Q5T5P2|Q5T5P2-3|Q5T5P2-10|Q5T5P2-7|Q5T5P2-2|Q5T5P2-9|Q5T5P2-6|Q5T5P2-8|Q5T5P2-4 Sickle tail protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31035.31035.2 10.63 10.63 3.15 3 1 1 0 738.3649 1395.7537 S809s TMT10 809 (R) sMTDVLTMLR (R) S(0.99)MT(0.0)DVLT(0.0)MLR s:Phosphorylated S KIAA1217 214739.6 2 10 303.1 376.04 HUMAN 1 -7.9515 26.7432 SLLLPIQSPEPSVIT-p Q8IZD4;S566-p SLLLPIQSPEPSVIT 0.92648668397199 0.0155209282366236 -0.02 0.728333333333333 0.6550504949267 25.0121234289282 -0.02 0.728333333333334 0.859993067788895 0.0031534624001066 -0.184962890215686 5.04055270213034 Q8IZD4 DCP1B Q8IZD4.S566.p_DCP1B Q8IZD4_S566s _1_1_566_566 Q8IZD4 Q8IZD4|Q8IZD4-2 mRNA-decapping enzyme 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.37049.37049.5 26.08 23.57 1.662 9 1 1 0 864.8801 4240.3732 S566s TMT10 542 (R) ESGLLPVGGQEPPAAATSLLLPIQsPEPSVITSSPLTK (L) ES(0.0)GLLPVGGQEPPAAAT(0.0)S(0.0)LLLPIQS(0.99)PEPS(0.0)VIT(0.0)S(0.0)S(0.0)PLT(0.0)K K:TMT10,s:Phosphorylated S DCP1B 68121.1 3 11 577.1 267.77 HUMAN 1 -0.6551 25.0121 SLLSKIISPGSSTPS-p Q5VT52;S758-p SLLSKIISPGSSTPS 0.297363648018023 0.0999683207734881 0.186 -0.194666666666667 9.90698204670158 13.219919609957 0.186 -0.194666666666667 0.102164919074244 0.0476439805858748 1.96555449690774 -2.5493447006062 Q5VT52 RPRD2 Q5VT52.S758.p_RPRD2 Q5VT52_S758s _1_1_758_758 Q5VT52 Q5VT52|Q5VT52-3|Q5VT52-2|Q5VT52-5 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11783.11783.2 10.44 3.85 1.628 7 1 1 0 799.9031 1518.8325 S758s TMT10 756 (K) IIsPGSSTPSSTR (S) IIS(0.99)PGS(0.0)S(0.0)T(0.0)PS(0.0)S(0.0)T(0.0)R s:Phosphorylated S RPRD2 156473.2 3 18 172.1 488.65 HUMAN 1 9.907 -13.2199 SLLTILGSPSPERMG-p Q96A19;S26-p SLLTILGSPSPERMG 0.758824185220205 0.811297337793882 0.0496666666666667 -0.0263333333333333 2.29631422899697 1.2731665923817 0.0496666666666667 -0.0263333333333333 0.589343607389228 0.745904694984917 0.573467031716856 -0.341027319872787 Q96A19 CCDC102A Q96A19.S26.p_CCDC102A Q96A19_S26s _1_1_26_26 Q96A19 Q96A19 Coiled-coil domain-containing protein 102A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27683.27683.3 17.72 17.72 2.603 4 1 1 0 579.3114 1655.953 S26s TMT10 18 (K) GSLLTILGsPSPER (M) GS(0.0)LLT(0.0)ILGS(0.99)PS(0.0)PER s:Phosphorylated S CCDC102A 62823.1 2 2 4345.1 33.11 HUMAN 1 2.2963 -1.2732 SLLVSSPSTKLLTLE-p A7KAX9;S594-p SLLVSSPSTKLLTLE 0.532600177749201 0.123652029356351 0.101 -0.164666666666667 5.06250783015876 11.9771558270446 0.101 -0.164666666666667 0.311708910358596 0.0634284965336337 1.11550076236893 -2.32712478739716 A7KAX9 ARHGAP32 A7KAX9.S594.p_ARHGAP32 A7KAX9_S594s _1_1_594_594 A7KAX9 A7KAX9|A7KAX9-2|G3V174 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17645.17645.3 9.68 10.74 1.214 5 1 1 0 519.6284 1476.9038 S594s TMT10 587 (K) SLLVSSPsTK (L) S(0.0)LLVS(0.0)S(0.0)PS(0.99)T(0.0)K K:TMT10,s:Phosphorylated S ARHGAP32 232236.5 1 4 159.1 497.4 HUMAN 1 5.0625 -11.9772 SLMEKNQSLVEENEK-p O95239;S394-p SLMEKNQSLVEENEK 0.351928236415973 0.434432443436027 -0.180666666666667 -0.0823333333333333 8.42344059118964 4.82527350580874 -0.180666666666667 -0.0823333333333333 0.143765917686987 0.32920972002691 -1.70854867015031 -1.07172888219307 O95239 KIF4A O95239.S394.p_KIF4A O95239_S394s _1_1_394_394 O95239 Q2VIQ3|O95239|O95239-2 Chromosome-associated kinesin KIF4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10800.10800.2 14.37 14.37 99 1 1 1 0 864.4352 1647.8954 S394s TMT10 392 (K) NQsLVEENEK (L) NQS(1.0)LVEENEK K:TMT10,s:Phosphorylated S KIF4A 141476.1 2 2 516.1 285.41 HUMAN 1 -8.4234 -4.8253 SLMHLTKSPSSKPSL-p O60508;S43-p SLMHLTKSPSSKPSL 0.500583169612807 0.0903375772701281 -0.131666666666667 -0.207333333333333 5.53949670178294 13.8130851130152 -0.131666666666667 -0.207333333333333 0.279286748425787 0.041561526352377 -1.20206959429263 -2.65709612391358 O60508 CDC40 O60508.S43.p_CDC40 O60508_S43s _1_1_43_43 O60508 O60508|Q5SRN1 Pre-mRNA-processing factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28655.28655.5 25.89 16.75 2.288 6 1 1 0 908.6987 4459.5106 S43s TMT10 43 (K) sPSSKPSLAVAVDSAPEVAVKEDLETGVHLDPAVK (E) S(0.99)PS(0.0)S(0.0)KPS(0.0)LAVAVDS(0.0)APEVAVKEDLET(0.0)GVHLDPAVK K:TMT10,s:Phosphorylated S CDC40 66204.7 10 1 3677.1 45.52 HUMAN 1 -5.5395 -13.8131 SLNERAETPPLPIPP-p Q8IX15-3;T453-p SLNERAETPPLPIPP 0.456411337786712 0.0827104739026718 0.158666666666667 0.355 6.27895377053194 14.3394658511842 0.158666666666667 0.355 0.235561669123583 0.0368174253459885 1.33410853406916 2.75376013610436 Q8IX15 HOMEZ Q8IX15.3.T453.p_HOMEZ Q8IX15-3_T453t _1_1_453_453 Q8IX15-3 Q8IX15-3 Isoform 2 of Homeobox and leucine zipper protein Homez HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29485.29625.3 19.52 14.61 99 1 1 1 0 828.4432 2403.3485 T453t TMT10 451 (R) AEtPPLPIPPPPPDIQPLER (Y) AET(1.0)PPLPIPPPPPDIQPLER t:Phosphorylated T HOMEZ 62093.3 6 5 1600.1 128.63 HUMAN 1 6.279 14.3395 SLNGCSPSPVHTMEQ-p Q9ULJ7;S1111-p SLNGCSPSPVHTMEQ 0.879685039296077 0.880448169638418 0.0223333333333333 -0.0213333333333333 1.09563134518409 0.776782014426365 0.0223333333333333 -0.0213333333333333 0.777028351950208 0.836222403241416 0.297697464189437 -0.21688876631485 Q9ULJ7 ANKRD50 Q9ULJ7.S1111.p_ANKRD50 Q9ULJ7_S1111s _1_1_1111_1111 Q9ULJ7 Q9ULJ7|Q9ULJ7-2 Ankyrin repeat domain-containing protein 50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19837.19837.5 19.34 19.34 1.131 9 1 1 0 752.3831 3677.9234 S1111s TMT10 1100 (K) YGASSLNGCSPsPVHTMEQKPLQSLSSK (V) Y(0.0)GAS(0.0)S(0.0)LNGCS(0.0)PS(0.99)PVHT(0.0)MEQKPLQS(0.0)LS(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANKRD50 157796.3 3 3 1875.1 109.69 HUMAN 1 1.0956 -0.7768 SLNGRRISDPQVFSK-p Q4L180;S791-p SLNGRRISDPQVFSK 0.419691736928719 0.00140340959819132 0.168 0.988666666666667 6.95879549529933 46.1655091386737 0.168 0.988666666666667 0.201428282861844 2.4179598553881e-05 1.45379863756599 13.2852634131568 Q4L180 FILIP1L Q4L180.S791.p_FILIP1L Q4L180_S791s _1_1_791_791 Q4L180 Q4L180|Q4L180-2|Q4L180-7|Q4L180-3|Q4L180-5|Q4L180-6 Filamin A-interacting protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15437.15437.3 9.96 9.96 2.804 2 1 1 0 572.3149 1634.963 S791s TMT10 789 (R) RIsDPQVFSK (E) RIS(0.99)DPQVFS(0.0)K K:TMT10,s:Phosphorylated S FILIP1L 131007 1 1 6727.1 9.96 HUMAN 1 6.9588 46.1655 SLNIENGSEKHDLSK-p Q15643;S1008-p SLNIENGSEKHDLSK 0.726488633986434 0.618028835500003 0.048 -0.0496666666666667 2.63223253516809 2.84034357583306 0.048 -0.0496666666666667 0.545477380783322 0.519954860622655 0.644670799154809 -0.687699818577348 Q15643 TRIP11 Q15643.S1008.p_TRIP11 Q15643_S1008s _1_1_1008_1008 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14945.14945.4 13.52 13.52 4.79 3 1 1 0 667.11 2585.4502 S1008s TMT10 999 (K) VQSLNIENGsEKHDLSK (A) VQS(0.0)LNIENGS(0.99)EKHDLS(0.0)K K:TMT10,s:Phosphorylated S TRIP11 228267 1 11 463.1 303.86 HUMAN 1 2.6322 -2.8403 SLNLPAVSWKMKAPE-p P35221;S858-p SLNLPAVSWKMKAPE 0.971623711929894 0.337999349808633 0.00566666666666666 0.109 0.242801564650809 6.24113050505751 0.00566666666666665 0.109 0.945626955656138 0.237622165563163 0.0714225564088707 1.32707980193688 P35221 CTNNA1 P35221.S858.p_CTNNA1 P35221_S858s _1_1_858_858 P35221 P35221-2|P35221-3 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28184.28184.3 20.54 20.15 11.287 3 1 1 0 709.7077 2047.1411 S858s TMT10 846 (K) SQGMASLNLPAVsWK (M) S(0.0)QGMAS(0.0)LNLPAVS(0.99)WK K:TMT10,s:Phosphorylated S CTNNA1 100754.2 1 24 169.1 491.55 HUMAN 1 0.2428 6.2411 SLNPEQWSQLKEQIS-p P53999;S111-p SLNPEQWSQLKEQIS 0.421570885738566 0.00539147169776956 -0.116 0.532 6.9093748335702 32.9250283194983 -0.116 0.532 0.203733533079549 0.000509914272512254 -1.44514024657701 7.36066395408082 P53999 SUB1 P53999.S111.p_SUB1 P53999_S111s _1_1_111_111 P53999 P53999 Activated RNA polymerase II transcriptional coactivator p15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28399.28399.3 10.85 10.85 10.488 2 1 1 0 680.0311 1958.1111 S111s TMT10 102 (K) GISLNPEQWsQLK (E) GIS(0.0)LNPEQWS(0.99)QLK K:TMT10,s:Phosphorylated S SUB1 14395.1 2 5 2095.1 97.85 HUMAN 1 -6.9094 32.925 SLNSSPWSGLMALGN-p Q8TCJ2;S21-p SLNSSPWSGLMALGN 0.642458231029281 0.175068160327959 -0.068 0.149 3.59214813898844 9.95139063232989 -0.068 0.149 0.437305748301305 0.101125559338802 -0.838318708210377 1.97247327863749 Q8TCJ2 STT3B Q8TCJ2.S21.p_STT3B Q8TCJ2_S21s _1_1_21_21 Q8TCJ2 Q8TCJ2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30159.30159.3 14.99 14.99 1.276 6 1 1 0 725.0153 2093.0647 S21s TMT10 13 (K) SSLNSSPWsGLMALGNSR (H) S(0.0)S(0.0)LNS(0.0)S(0.0)PWS(0.99)GLMALGNS(0.0)R s:Phosphorylated S STT3B 94300.1 1 3 3653.1 46.06 HUMAN 1 -3.5921 9.9514 SLNTLQDSLEFINQD-p Q8TF40;S181-p SLNTLQDSLEFINQD 0.213993081004726 0.0923945894091804 -0.332 0.235666666666667 12.9049580967857 13.6816006610701 -0.332 0.235666666666667 0.0512276212974446 0.0428390601159116 -2.49395490389144 2.63310739797255 Q8TF40 FNIP1 Q8TF40.S181.p_FNIP1 Q8TF40_S181s _1_1_181_181 Q8TF40 Q8TF40|Q8TF40-3|J3KNG8|Q8TF40-2 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27427.27427.4 14.94 14.94 1.243 7 1 1 0 877.682 3427.7415 S181s TMT10 167 (R) TGSSICGSLNTLQDsLEFINQDNNTLK (A) T(0.0)GS(0.0)S(0.0)ICGS(0.0)LNT(0.0)LQDS(0.99)LEFINQDNNT(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FNIP1 132549.9 2 4 310.1 372.19 HUMAN 1 -12.905 13.6816 SLPAEEDSVLEKLGE-p E7EVA0;S660-p SLPAEEDSVLEKLGE 0.0732853965819104 0.434464510584299 -0.435333333333333 -0.0773333333333333 24.4007533576091 4.82450008781934 -0.435333333333333 -0.0773333333333333 0.00363015078171498 0.329268352913938 -4.8935896092109 -1.07158631234747 E7EVA0 NotFound E7EVA0.S660.p_NotFound E7EVA0_S660s _1_1_660_660 E7EVA0 E7EVA0 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17253.17253.3 14.36 10.96 1.157 2 1 1 0 791.4185 2292.2724 S660s TMT10 651 (K) KCSLPAEEDsVLEK (L) KCS(0.0)LPAEEDS(0.99)VLEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MAP4 246695.2 1 19 38.1 865.62 HUMAN 1 -24.4008 -4.8245 SLPARSPSPPRRRRL-p Q8IY33;S660-p SLPARSPSPPRRRRL 0.949294543225558 0.0173223641138069 0.0306666666666667 0.548 0.447498789796345 24.3028330528926 0.0306666666666667 0.548 0.902090524452483 0.00371292942870385 0.128902420593842 4.86349460117928 Q8IY33 MICALL2 Q8IY33.S660.p_MICALL2 Q8IY33_S660s _1_1_660_660 Q8IY33 Q8IY33|Q8IY33-5 MICAL-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3757.3757.3 7.21 7.21 7.21 2 1 1 0 369.1954 1025.6053 S660s TMT10 658 (R) SPsPPRR (R) S(0.0)PS(0.99)PPRR s:Phosphorylated S MICALL2 98299.3 1 24 387.1 332.82 HUMAN 1 0.4475 24.3028 SLPDAGLSPGSQVDS-p Q13459;S1405-p SLPDAGLSPGSQVDS 0.0750306974350764 0.0322001530658071 -0.376333333333333 -0.386 24.0906160621755 20.1361934379673 -0.376333333333333 -0.386 0.00389886675941358 0.00969126917357847 -4.81708394551783 -3.90455464315792 Q13459 MYO9B Q13459.S1405.p_MYO9B Q13459_S1405s _1_1_1405_1405 Q13459 Q13459|M0R0P8|Q13459-2 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16433.16433.3 22.65 22.65 4.407 5 1 1 0 960.8364 2800.5296 S1405s TMT10 1392 (K) KPGDASSLPDAGLsPGSQVDSK (S) KPGDAS(0.0)S(0.0)LPDAGLS(0.99)PGS(0.0)QVDS(0.0)K K:TMT10,s:Phosphorylated S MYO9B 244993.9 3 16 211.1 438.12 HUMAN 1 -24.0906 -20.1362 SLPDKCNSFLHNKAE-p Q9NYL2;S275-p SLPDKCNSFLHNKAE 0.0742703858650733 0.0321231090575653 -0.498333333333333 0.465333333333333 24.2148376488251 20.1478268375587 -0.498333333333334 0.465333333333333 0.00378892697530708 0.00966534401326983 -4.84762863822195 3.90705712466147 Q9NYL2 ZAK Q9NYL2.S275.p_ZAK Q9NYL2_S275s _1_1_275_275 Q9NYL2 Q9NYL2|Q9NYL2-2|Q9NYL2-3 Mitogen-activated protein kinase kinase kinase 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10894.10894.2 12.76 12.76 99 1 1 1 0 779.3854 1477.7986 S275s TMT10 273 (K) CNsFLHNK (A) CNS(1.0)FLHNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP3K20 91781 1 3 1239.1 162.96 HUMAN 1 -24.2148 20.1478 SLPETDDSLLCDAGT-p O14686-3;S1270-p SLPETDDSLLCDAGT 0.139932386670141 0.0160877143467991 0.297 0.504333333333333 17.475013936369 24.7744826600274 0.297 0.504333333333333 0.0178853978973243 0.00333082437368702 3.3567865042538 4.98074236899183 O14686 KMT2D O14686.3.S1270.p_KMT2D O14686-3_S1270s _1_1_1270_1270 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28374.28374.4 21.61 21.66 1.239 6 1 1 0 970.2295 3797.9028 S1270s TMT10 1259 (R) LCTDSLPETDDsLLCDAGTAISGGKAEGEK (G) LCT(0.0)DS(0.0)LPET(0.0)DDS(0.99)LLCDAGT(0.0)AIS(0.0)GGKAEGEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2D 600227.3 5 10 17.1 1042.08 HUMAN 1 17.475 24.7745 SLPGTPHSPAPPSGG-p Q8N1G0;S140-p SLPGTPHSPAPPSGG 0.80621185033956 0.168500160742522 0.0373333333333333 0.176666666666667 1.8029357651255 10.1728802795084 0.0373333333333333 0.176666666666667 0.660246980132028 0.0960974740028932 0.464704556941839 2.01093322231774 Q8N1G0 ZNF687 Q8N1G0.S140.p_ZNF687 Q8N1G0_S140s_1_1_140_140 Q8N1G0 Q8N1G0|Q8N1G0-2|F8WCX2 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21723.21723.3 24.06 22.03 2.21 6 1 1 0 1119.8694 3276.6512 N125n S140s TMT10 123 (R) MQnGFGSPEPSLPGTPHsPAPPSGGTWK (E) MQN(1.0)GFGS(0.0)PEPS(0.0)LPGT(0.0)PHS(0.99)PAPPS(0.0)GGT(0.0)WK K:TMT10,n:Deamidated,s:Phosphorylated S ZNF687 131979.7 15 1 156.1 501.88 HUMAN 1 1.8029 10.1729 SLPLEGWSPALKTQG-p E9PIR9;S98-p SLPLEGWSPALKTQG 0.181080338359562 0.00611959233892658 -0.239666666666667 -0.492666666666667 14.6369950144346 31.9020659460041 -0.239666666666667 -0.493620404318724 0.0343795745976077 0.000645347163296015 -2.81064248693887 -7.0202980524335 E9PIR9 NotFound E9PIR9.S98.p_NotFound E9PIR9_S98s _1_1_98_98 E9PIR9 E9PIR9 Beta/gamma crystallin domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32346.32346.3 17.02 17.02 8.013 2 1 1 0 727.39 2100.1928 S98s TMT10 88 (K) LACSLPLEGWsPALK (T) LACS(0.0)LPLEGWS(0.99)PALK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CRYBG2 87519.3 1 3 3434.1 51.2 HUMAN 1 -14.637 -31.9021 SLPLEKGSPVTTTKA-p Q7Z2K8;S615-p SLPLEKGSPVTTTKA 0.0879384467271527 0.135639067593483 0.367 -0.179333333333333 22.5021990929991 11.4345427176614 0.367 -0.179333333333333 0.00562056650186861 0.0718696828249292 4.43772397619552 -2.23136832792973 Q7Z2K8 GPRIN1 Q7Z2K8.S615.p_GPRIN1 Q7Z2K8_S615s _1_1_615_615 Q7Z2K8 Q7Z2K8|Q7Z2K8-2 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19332.19332.2 10.09 10.09 1.599 5 1 1 0 1191.1846 2301.3997 S615s TMT10 606 (K) VGSLPLEKGsPVTTTK (A) VGS(0.0)LPLEKGS(0.99)PVT(0.0)T(0.0)T(0.0)K K:TMT10,s:Phosphorylated S GPRIN1 103196.3 6 16 292.1 381.4 HUMAN 1 22.5022 -11.4345 SLPPLAQSPPKHERA-p A0A1B0GW72;S973-p SLPPLAQSPPKHERA 0.266942627760972 0.0258237434974621 -0.161333333333333 -0.352 10.8705115762513 21.5959325416884 -0.161333333333333 -0.352 0.081836838292916 0.00692479220415149 -2.13343915556113 -4.22577279528976 A0A1B0GW72 NotFound A0A1B0GW72.S973.p_NotFound A0A1B0GW72_S973s _1_1_973_973 A0A1B0GW72 A0A1B0GW72|Q96PX9 Pleckstrin homology domain-containing family G member 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23622.23634.5 21.98 17.45 2.243 3 1 1 0 718.1848 3506.9371 S973s TMT10 952 (R) LRLEEALSEAAPDPSLPPLAQsPPKHER (A) LRLEEALS(0.0)EAAPDPS(0.0)LPPLAQS(0.99)PPKHER K:TMT10,s:Phosphorylated S PLEKHG4B 181102.6 6 7 1118.1 175.42 HUMAN 1 -10.8705 -21.5959 SLPPRRDSTEAPKPK-p Q8N201;S1318-p SLPPRRDSTEAPKPK 0.989497403870838 0.0916933984707473 0.00266666666666667 0.357666666666667 0.0934995076261692 13.7244908984459 0.00266666666666666 0.357666666666667 0.978701038698906 0.0424180705564454 0.0279537450476664 2.64092583930529 Q8N201 INTS1 Q8N201.S1318.p_INTS1 Q8N201_S1318s _1_1_1318_1318 Q8N201 Q8N201 Integrator complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3809.3809.3 11.36 11.36 1.112 2 1 1 0 556.3024 1586.9266 S1318s Hydrogen 1316 (R) RDsTEAPKPK (S) RDS(0.99)T(0.0)EAPKPK K:TMT10-Lys-Only,s:Phosphorylated S INTS1 246518.1 6 5 604.1 262.74 HUMAN 1 0.0935 13.7245 SLPQVPDSPIFTNSL-p Q70EL4;S766-p SLPQVPDSPIFTNSL 0.660412515639265 0.103521516153491 0.0656666666666667 0.181666666666667 3.3746894851472 13.0105992867053 0.0656666666666667 0.181666666666667 0.459759859582091 0.0499965539540249 0.795540565450286 2.51159767319524 Q70EL4 USP43 Q70EL4.S766.p_USP43 Q70EL4_S766s _1_1_766_766 Q70EL4 Q70EL4|Q70EL4-4|Q70EL4-3|Q70EL4-2 Ubiquitin carboxyl-terminal hydrolase 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34499.34499.4 21.65 21.65 3.263 8 1 1 0 1014.5011 3975.0032 S766s TMT10 747 (R) GSLLSWSSAPCPSLPQVPDsPIFTNSLCNQEK (G) GS(0.0)LLS(0.0)WS(0.0)S(0.0)APCPS(0.0)LPQVPDS(0.99)PIFT(0.0)NS(0.0)LCNQEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S USP43 124119.2 4 5 817.1 219.69 HUMAN 1 3.3747 13.0106 SLPSRSVSVDESRPE-p Q96BY7;S497-p SLPSRSVSVDESRPE 0.59992802754024 0.0153689716978106 -0.097 0.353 4.09816791926225 25.0834914797642 -0.097 0.353 0.389209299158617 0.00310206470241713 -0.935848574567391 5.05861244138744 Q96BY7 ATG2B Q96BY7.S497.p_ATG2B Q96BY7_S497s _1_1_497_497 Q96BY7 Q96BY7 Autophagy-related protein 2 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19178.19178.3 15.1 15.1 1.13 3 1 1 0 648.3327 1863.0173 S497s TMT10 495 (R) SVsVDESRPELIFR (L) S(0.0)VS(0.99)VDES(0.0)RPELIFR s:Phosphorylated S ATG2B 234641.2 2 4 1188.1 168.47 HUMAN 1 -4.0982 25.0835 SLPSTSSTSSTKRLK-p Q12857-2;T272-p SLPSTSSTSSTKRLK 0.541115801504562 0.313892978028703 0.0896666666666667 0.0986666666666667 4.91994904567646 6.65103619373348 0.0896666666666667 0.100051545997052 0.322110658323129 0.216220257702405 1.08936772066056 1.39941225907343 Q12857 NFIA Q12857.2.T272.p_NFIA Q12857-2_T272t _1_1_272_272 Q12857-2 Q12857-4|B1AKN8|Q12857-3|Q12857-2|B1AKN5|B1AKN7 Isoform 2 of Nuclear factor 1 A-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10335.10335.3 10.64 10.64 1.143 9 1 1 0 574.2964 1640.9107 T272t TMT10 265 (R) SLPSTSStSSTK (R) S(0.0)LPS(0.0)T(0.0)S(0.0)S(0.0)T(0.99)S(0.0)S(0.0)T(0.0)K K:TMT10,t:Phosphorylated T NFIA 55018.3 3 6 555.1 273.2 HUMAN 1 4.9199 6.651 SLPTHDPSPLQRYSE-p P04626;S1107-p SLPTHDPSPLQRYSE 0.154452652161597 0.0102221069934532 -0.269333333333333 -0.589666666666667 16.300587818833 27.9501434258981 -0.269333333333333 -0.589666666666667 0.0234391154474594 0.0016031924443316 -3.12612112251629 -5.82348529461107 P04626 ERBB2 P04626.S1107.p_ERBB2 P04626_S1107s _1_1_1107_1107 P04626 P04626|P04626-4|P04626-5|B4DTR1|P04626-2|P04626-3 Receptor tyrosine-protein kinase erbB-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13570.13570.3 18.97 18.97 2.638 3 1 1 0 652.3365 1875.0286 S1107s TMT10 1097 (K) GLQSLPTHDPsPLQR (Y) GLQS(0.0)LPT(0.0)HDPS(0.99)PLQR s:Phosphorylated S ERBB2 141274.2 2 20 521.1 283.33 HUMAN 1 -16.3006 -27.9501 SLPVRRGSVTVLSGY-p Q6P6C2;S252-p SLPVRRGSVTVLSGY 0.952606731320845 0.53740570482938 0.0116666666666667 -0.113333333333333 0.416955586734946 3.62810822555517 0.0116666666666667 -0.113333333333333 0.908457137345443 0.433699755630752 0.120470654128883 -0.845205699474355 Q6P6C2 ALKBH5 Q6P6C2.S252.p_ALKBH5 Q6P6C2_S252s _1_1_252_252 Q6P6C2 Q6P6C2-1|Q6P6C2-3 RNA demethylase ALKBH5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22267.22267.4 20.37 20.37 1.475 5 1 1 0 831.9391 3244.7513 S252s TMT10 250 (R) RGsVTVLSGYAADEITHCIRPQDIK (E) RGS(0.99)VT(0.0)VLS(0.0)GY(0.0)AADEIT(0.0)HCIRPQDIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ALKBH5 44597.5 1 2 578.1 267.46 HUMAN 1 0.417 -3.6281 SLQARPVSMPVDRNL-p Q4KWH8;S970-p SLQARPVSMPVDRNL 0.420320976430283 0.229548400724636 -0.113 -0.153 6.94656690412039 8.41978782789496 -0.113 -0.153 0.201996251215684 0.14388688716611 -1.45165675302127 -1.70734465957004 Q4KWH8 PLCH1 Q4KWH8.S970.p_PLCH1 Q4KWH8_S970s _1_1_970_970 Q4KWH8 Q4KWH8|Q4KWH8-2|Q4KWH8-4|Q4KWH8-3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29111.29111.5 17.88 16.72 1.106 5 1 1 0 698.3878 3407.9449 S970s TMT10 963 (R) SLQARPVsMPVDRNLLGALSLPVSETAK (D) S(0.0)LQARPVS(0.99)MPVDRNLLGALS(0.0)LPVS(0.0)ET(0.0)AK K:TMT10,s:Phosphorylated S PLCH1 191330.6 6 6 201.1 451.38 HUMAN 1 -6.9466 -8.4198 SLQDRYGSY______-p Q8N6H7;S520-p SLQDRYGSY______ 0.403159221089301 0.353807684020909 -0.129333333333333 -0.103333333333333 7.28329842557433 5.98388580021531 -0.129333333333333 -0.103333333333333 0.186926191433972 0.252122392670941 -1.51051764392673 -1.28138836068863 Q8N6H7 ARFGAP2 Q8N6H7.S520.p_ARFGAP2 Q8N6H7_S520s _1_1_520_520 Q8N6H7 Q8N6H7|G5E9L0|Q8N6H7-2|A0A0D9SF70|Q8N6H7-3 ADP-ribosylation factor GTPase-activating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30290.30290.3 13.81 13.81 1.271 4 1 1 0 800.0434 2318.1471 S520s TMT10 503 (K) MAVLANGVMNSLQDRYGsY (-) MAVLANGVMNS(0.0)LQDRY(0.0)GS(0.99)Y(0.0) s:Phosphorylated S ARFGAP2 57061.7 4 11 866.1 210.19 HUMAN 1 -7.2833 -5.9839 SLQEKFFTPPSCWPR-p Q7RTP6;T1545-p SLQEKFFTPPSCWPR 0.797816348721616 0.00362223001802219 -0.0406666666666667 -0.869333333333333 1.89364919509691 36.3002927873025 -0.0406666666666667 -0.869333333333334 0.646599077232478 0.000234407078031733 -0.485118923198874 -8.585443554746 Q7RTP6 MICAL3 Q7RTP6.T1545.p_MICAL3 Q7RTP6_T1545t _1_1_1545_1545 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21676.21676.4 14.84 8 13.988 2 1 1 0 610.8148 2360.2738 T1545t TMT10 1543 (K) FFtPPSCWPRPEKPR (H) FFT(0.99)PPS(0.0)CWPRPEKPR C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MICAL3 225431.9 1 18 190.1 466.81 HUMAN 1 -1.8936 -36.3003 SLQKEDKSPETGTAG-p Q8NFC6;S2475-p SLQKEDKSPETGTAG 0.267388625917713 0.169199836432821 0.287666666666667 -0.293 10.8553178054222 10.1476012486728 0.287666666666667 -0.293 0.0821236454684854 0.0966584608062478 2.13078104885157 -2.00654094716639 Q8NFC6 BOD1L1 Q8NFC6.S2475.p_BOD1L1 Q8NFC6_S2475s _1_1_2475_2475 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18053.18053.5 20.44 20.44 1.234 10 1 1 0 779.4056 3813.0233 S2475s TMT10 2463 (K) NVLLNSLQKEDKsPETGTAGGSSTASYSAGR (G) NVLLNS(0.0)LQKEDKS(0.99)PET(0.0)GT(0.0)AGGS(0.0)S(0.0)T(0.0)AS(0.0)Y(0.0)S(0.0)AGR K:TMT10,s:Phosphorylated S BOD1L1 332628.7 2 19 97.1 603.4 HUMAN 1 10.8553 -10.1476 SLQQGEGSKKGKGKK-p P09132;S135-p SLQQGEGSKKGKGKK 0.0629489541987992 0.0470169763412251 0.403 -0.26 26.0841451380454 17.7631175525861 0.403 -0.26 0.00246368674073367 0.0167374096143343 5.32370256167207 -3.41173567232878 P09132 SRP19 P09132.S135.p_SRP19 P09132_S135s _1_1_135_135 P09132 P09132|A0A087WYR0 Signal recognition particle 19 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7476.7476.3 13.68 13.68 3.349 3 1 1 0 786.7475 2278.2606 S135s TMT10 122 (K) TGGADQSLQQGEGsKK (G) T(0.0)GGADQS(0.0)LQQGEGS(0.99)KK K:TMT10,s:Phosphorylated S SRP19 16383.6 4 2 2826.1 69.07 HUMAN 1 26.0841 -17.7631 SLREARGSPNTASAE-p Q6PJG6;S742-p SLREARGSPNTASAE 0.543303086473255 0.177267713482447 0.0866666666666667 0.156333333333333 4.89228878334609 9.88217296391712 0.0866666666666667 0.156333333333333 0.324168731563749 0.102750206558056 1.08428199722667 1.96046467375794 Q6PJG6 BRAT1 Q6PJG6.S742.p_BRAT1 Q6PJG6_S742s _1_1_742_742 Q6PJG6 Q6PJG6|Q6PJG6-3 BRCA1-associated ATM activator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11137.11137.2 13.85 6.26 2.492 4 1 1 0 840.9105 1600.8492 S742s TMT10 741 (R) GsPNTASAEATLPR (W) GS(0.99)PNT(0.0)AS(0.0)AEAT(0.0)LPR s:Phosphorylated S BRAT1 89829.1 8 1 4040.1 38.75 HUMAN 1 4.8923 9.8822 SLRGRGPSPAAASPE-p Q9P107;S914-p SLRGRGPSPAAASPE 0.446807749322286 0.539072151578794 -0.216 -0.0646666666666667 6.45514783755899 3.61045887391656 -0.216 -0.0646666666666667 0.226196153935212 0.435465860095687 -1.36526046402075 -0.841762765771074 Q9P107 GMIP Q9P107.S914.p_GMIP Q9P107_S914s _1_1_914_914 Q9P107 Q9P107|Q9P107-2 GEM-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7965.7965.3 14.34 9.73 4.774 3 1 1 0 639.3254 1835.9925 S914s TMT10 910 (R) GRGPsPAAASPEGSPLR (R) GRGPS(0.99)PAAAS(0.0)PEGS(0.0)PLR s:Phosphorylated S GMIP 107650.9 2 8 1251.1 161.9 HUMAN 1 -6.4551 -3.6105 SLRKRKASPEPPDSA-p Q9H1B7;S547-p SLRKRKASPEPPDSA 0.87289946291738 0.848312243900627 0.0243333333333333 0.0366666666666667 1.15522651559574 1.00325701610266 0.0243333333333333 0.0366666666666667 0.766438563873986 0.793732747081352 0.312374590638369 0.274668150952818 Q9H1B7 IRF2BPL Q9H1B7.S547.p_IRF2BPL Q9H1B7_S547s _1_1_547_547 Q9H1B7 Q9H1B7 Interferon regulatory factor 2-binding protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11924.11924.5 24.58 24.58 10.929 2 1 1 0 652.9508 3180.758 S547s TMT10 544 (K) RKAsPEPPDSAEGALKLGEEQQR (Q) RKAS(0.99)PEPPDS(0.0)AEGALKLGEEQQR K:TMT10,s:Phosphorylated S IRF2BPL 83627.3 22 8 282.1 386.92 HUMAN 1 1.1552 1.0033 SLRLASDSDAESDSR-p Q8WXG6;S820-p SLRLASDSDAESDSR 0.325800852562895 0.949485171508749 0.170333333333333 -0.0073333333333333 9.11950338518956 0.322535773262917 0.170333333333333 -0.00733333333333331 0.122475624187207 0.928424137074767 1.82905158456986 -0.0940804710694751 Q8WXG6 MADD Q8WXG6.S820.p_MADD Q8WXG6_S820s _1_1_820_820 Q8WXG6 Q8WXG6|Q8WXG6-2|A0A0A0MRB5|Q8WXG6-3|Q8WXG6-7|Q8WXG6-4|Q8WXG6-5|Q8WXG6-8|Q8WXG6-6 MAP kinase-activating death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6978.6978.2 14.17 9.66 1.273 4 1 1 0 781.3325 1481.6917 S820s TMT10 816 (R) LASDsDAESDSR (A) LAS(0.0)DS(0.99)DAES(0.0)DS(0.0)R s:Phosphorylated S MADD 184612.2 1 6 546.1 275.73 HUMAN 1 9.1195 -0.3225 SLRLCTDSLPETDDS-p O14686-3;S1263-p SLRLCTDSLPETDDS 0.110880621512576 0.0340474106016949 0.332333333333333 0.530666666666667 19.9741428277415 19.7841169977043 0.332333333333333 0.530666666666667 0.0100597159323604 0.0105096511410211 3.87340333698432 3.82923806356611 O14686 KMT2D O14686.3.S1263.p_KMT2D O14686-3_S1263s _1_1_1263_1263 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29848.29848.3 17.57 17.69 1.183 6 1 1 0 1045.4938 3054.5012 S1263s TMT10 1259 (R) LCTDsLPETDDSLLCDAGTAISGGK (A) LCT(0.0)DS(0.99)LPET(0.0)DDS(0.0)LLCDAGT(0.0)AIS(0.0)GGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2D 600227.3 2 9 17.1 1042.08 HUMAN 1 19.9741 19.7841 SLRLFSLSNPSLSTT-p Q6UUV7;S370-p SLRLFSLSNPSLSTT 0.380643803112374 0.0274245396118315 -0.136 -0.298333333333333 7.74936110346538 21.1853563438728 -0.136 -0.298333333333333 0.1679051007438 0.00761139684012252 -1.59164903455102 -4.13392133427148 Q6UUV7 CRTC3 Q6UUV7.S370.p_CRTC3 Q6UUV7_S370s _1_1_370_370 Q6UUV7 Q6UUV7|Q6UUV7-3 CREB-regulated transcription coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28111.28111.2 15.68 14.01 1.899 8 1 1 0 1144.0798 2207.1869 S370s TMT10 366 (R) LFSLsNPSLSTTNLSGPSR (R) LFS(0.0)LS(0.99)NPS(0.0)LS(0.0)T(0.0)T(0.0)NLS(0.0)GPS(0.0)R s:Phosphorylated S CRTC3 67129.2 6 4 1297.1 156.77 HUMAN 1 -7.7494 -21.1854 SLRRRTHSEGSLLQE-p P49796;S943-p SLRRRTHSEGSLLQE 0.886118944763575 0.898557812141414 -0.0233333333333333 0.0146666666666667 1.02547346781307 0.651199988561846 -0.0233333333333333 0.0146666666666667 0.789682753498752 0.86075588595039 -0.280256029208416 0.18392419114147 P49796 RGS3 P49796.S943.p_RGS3 P49796_S943s _1_1_943_943 P49796 P49796-1|P49796-6|P49796-4 Regulator of G-protein signaling 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9370.9370.3 9.96 9.96 2.315 3 1 1 0 554.9399 1582.8387 S943s TMT10 941 (R) THsEGSLLQEPR (G) T(0.0)HS(0.99)EGS(0.0)LLQEPR s:Phosphorylated S RGS3 134216.1 2 8 1029.1 186.27 HUMAN 1 -1.0255 0.6512 SLRRVELSGPKAAEP-p Q9UHD8;S96-p SLRRVELSGPKAAEP 0.538169181193011 0.768029889254702 -0.118333333333333 0.0316666666666667 4.9752158318793 1.58477760111541 -0.118333333333333 0.0316666666666667 0.318037562887115 0.69426015333561 -1.09951430000605 0.414705045475324 Q9UHD8 SEPT9 Q9UHD8.S96.p_SEPT9 Q9UHD8_S96s _1_1_96_96 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2|Q9UHD8-7 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9979.9979.3 8.93 8.93 99 1 1 1 0 475.2739 1343.8411 S96s TMT10 92 (R) RVELsGPK (A) RVELS(1.0)GPK K:TMT10,s:Phosphorylated S SEPT9 65685.6 1 11 110.1 572.91 HUMAN 1 -4.9752 1.5848 SLRSLFGSGYSKSPD-p O60333-2;S1381-p SLRSLFGSGYSKSPD 0.479956479680966 0.0277339477345732 -0.134 -0.297666666666667 5.86949545436857 21.1016089338393 -0.134 -0.297666666666667 0.258851362064955 0.007759595930731 -1.26128020125331 -4.1153334351621 O60333 KIF1B O60333.2.S1381.p_KIF1B O60333-2_S1381s _1_1_1381_1381 O60333-2 O60333-4|Q4R9M9|A0A087WWA3|O60333-2 Isoform 2 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19803.19803.2 13.01 13.01 2.23 4 1 1 0 742.3842 1403.7935 S1381s TMT10 1377 (R) SLFGsGYSK (S) S(0.0)LFGS(0.99)GY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S KIF1B 200628.3 1 6 606.1 262.24 HUMAN 1 -5.8695 -21.1016 SLRTAALSLKLLKNQ-p Q5TH69;S659-p SLRTAALSLKLLKNQ 0.192059131883792 0.891326488944317 -0.254333333333333 -0.031 13.9882213409637 0.701709892908326 -0.254333333333333 -0.031 0.0399188357030114 0.850802996313868 -2.69075615814444 -0.19726676558838 Q5TH69 ARFGEF3 Q5TH69.S659.p_ARFGEF3 Q5TH69_S659s _1_1_659_659 Q5TH69 Q5TH69 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16158.16158.2 10.69 4.71 5.162 2 1 1 0 621.3665 1161.7607 S659s TMT10 655 (R) TAALsLK (L) T(0.0)AALS(0.99)LK K:TMT10,s:Phosphorylated S ARFGEF3 244013.5 2 4 618.1 260.46 HUMAN 1 -13.9882 -0.7017 SLRTLGPSVDPEIPS-p Q6Y2X3;S28-p SLRTLGPSVDPEIPS 0.98090727141703 0.990203016828385 0.00633333333333332 -0.00133333333333332 0.16594241203519 0.0646820510172015 0.00633333333333332 -0.00133333333333332 0.962511126944915 0.985216768335471 0.0492180758232905 -0.0193988779063898 Q6Y2X3 DNAJC14 Q6Y2X3.S28.p_DNAJC14 Q6Y2X3_S28s _1_1_28_28 Q6Y2X3 Q6Y2X3 DnaJ homolog subfamily C member 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27744.27744.3 14.87 9.31 3.443 4 1 1 0 694.357 2001.0854 S28s TMT10 24 (R) TLGPsVDPEIPSFSGLR (D) T(0.0)LGPS(0.99)VDPEIPS(0.0)FS(0.0)GLR s:Phosphorylated S DNAJC14 79480.2 1 1 4306.1 33.98 HUMAN 1 0.1659 -0.0647 SLSEPLESDEADLAK-p Q03188;S620-p SLSEPLESDEADLAK 0.505955843363506 0.14669895998015 0.091 0.151333333333333 5.46078510283883 10.9770091849679 0.091 0.151333333333333 0.284394694188953 0.0798544424046095 1.18786935865981 2.15111456267832 Q03188 CENPC Q03188.S620.p_CENPC Q03188_S620s _1_1_620_620 Q03188 Q03188 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19611.19611.4 18.67 18.67 4.912 3 1 1 0 665.5954 2579.3841 S620s TMT10 612 (R) CSLSEPLEsDEADLAKK (K) CS(0.0)LS(0.0)EPLES(0.99)DEADLAKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CENPC 107459.5 3 19 209.1 442.77 HUMAN 1 5.4608 10.977 SLSFSSDSEGNFETP-p O75410;S57-p SLSFSSDSEGNFETP 0.497175098488218 0.318667388255672 -0.106333333333333 0.099 5.58864348900239 6.56738205065965 -0.106333333333333 0.099 0.276144025242207 0.220425479871145 -1.21092033697118 1.38469312625601 O75410 TACC1 O75410.S57.p_TACC1 O75410_S57s _1_1_57_57 O75410 O75410-2 Transforming acidic coiled-coil-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25567.25567.5 23.76 23.69 1.209 8 1 1 0 680.331 3317.6578 S57s TMT10 50 (K) SLSFSSDsEGNFETPEAETPIRSPFK (E) S(0.0)LS(0.0)FS(0.0)S(0.0)DS(0.99)EGNFET(0.0)PEAET(0.0)PIRS(0.0)PFK K:TMT10,s:Phosphorylated S TACC1 88648.6 15 4 442.1 311.73 HUMAN 1 -5.5886 6.5674 SLSFTTRSCPPPGGS-p Q9C075;S51-p SLSFTTRSCPPPGGS 0.18516399568195 0.0407557024821666 0.208 0.343666666666667 14.4058144856568 18.6302846809143 0.208 0.343666666666667 0.0362592278495029 0.0137079190753202 2.767736147545 3.58789724542965 Q9C075 KRT23 Q9C075.S51.p_KRT23 Q9C075_S51s _1_1_51_51 Q9C075 Q9C075 Keratin, type I cytoskeletal 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8827.8827.2 12.82 4.93 7.675 3 1 1 0 805.853 1530.7321 S51s TMT10 51 (R) sCPPPGGSWGSGR (S) S(0.99)CPPPGGS(0.0)WGS(0.0)GR C:Carbamidomethylation,s:Phosphorylated S KRT23 48301.4 1 4 2033.1 101.49 HUMAN 1 14.4058 18.6303 SLSKPNISPSHSRPP-p Q15648;S1192-p SLSKPNISPSHSRPP 0.519299715278748 0.36172445548333 -0.14 0.114666666666667 5.25524216197289 5.85820564371831 -0.14 0.114666666666667 0.298178127959864 0.259525140976845 -1.15063358575824 1.25896972551508 Q15648 MED1 Q15648.S1192.p_MED1 Q15648_S1192s _1_1_1192_1192 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16483.16483.4 7.83 5.02 6.784 8 1 1 0 886.218 3461.8778 S1192s TMT10 1178 (K) PSSLMNPSLSKPNIsPSHSRPPGGSDK (L) PS(0.0)S(0.0)LMNPS(0.0)LS(0.0)KPNIS(0.99)PS(0.0)HS(0.0)RPPGGS(0.0)DK K:TMT10,s:Phosphorylated S MED1 169445 2 15 115.1 566.87 HUMAN 1 -5.2552 5.8582 SLSLAPLSPRAPSED-p Q969H4;S314-p SLSLAPLSPRAPSED 0.871383375527358 0.442761281671774 0.0256666666666667 0.0756666666666667 1.1706041747104 4.71214093083499 0.0256666666666667 0.0756666666666667 0.763729528908653 0.337898222285447 0.316141702414055 1.05083006228223 Q969H4 CNKSR1 Q969H4.S314.p_CNKSR1 Q969H4_S314s _1_1_314_314 Q969H4 Q969H4|Q969H4-2|G3V160 Connector enhancer of kinase suppressor of ras 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21269.21475.3 13.87 13.87 4.572 4 1 1 0 511.9462 1453.8576 S314s TMT10 305 (R) SPSLSLAPLsPR (A) S(0.0)PS(0.0)LS(0.0)LAPLS(0.99)PR s:Phosphorylated S CNKSR1 80560.2 2 5 1912.1 107.86 HUMAN 1 1.1706 4.7121 SLSLEATSPLSAEKH-p Q86YC2;S387-p SLSLEATSPLSAEKH 0.425266233604415 0.00110621338012195 -0.11 -1.06566666666667 6.84133510269708 49.7531476688557 -0.11 -1.06566666666667 0.206950504632188 1.05848628001682e-05 -1.43321017054725 -15.5254392995897 Q86YC2 PALB2 Q86YC2.S387.p_PALB2 Q86YC2_S387s _1_1_387_387 Q86YC2 Q86YC2|H3BN63 Partner and localizer of BRCA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21087.21087.2 13.74 13.74 1.148 5 1 1 0 986.0262 1891.0788 S387s TMT10 380 (K) SLSLEATsPLSAEK (H) S(0.0)LS(0.0)LEAT(0.0)S(0.99)PLS(0.0)AEK K:TMT10,s:Phosphorylated S PALB2 133061.7 2 6 934.1 198.86 HUMAN 1 -6.8413 -49.7531 SLSLGTITDEEMKTG-p Q14980;T1952-p SLSLGTITDEEMKTG 0.725251266026429 0.0629015317055474 -0.079 0.343666666666667 2.64377960994704 15.9945513249034 -0.079 0.343666666666667 0.544028985213816 0.025150398315055 -0.647082316941748 3.06497936324403 Q14980 NUMA1 Q14980.T1952.p_NUMA1 Q14980_T1952t _1_1_1952_1952 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23460.23460.3 17.38 17.38 1.127 7 1 1 0 1022.5039 2985.5313 T1952t TMT10 1936 (K) TCYPLESRPSLSLGTItDEEMK (T) T(0.0)CY(0.0)PLES(0.0)RPS(0.0)LS(0.0)LGT(0.0)IT(0.99)DEEMK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T NUMA1 239339.3 5 29 31.1 900.97 HUMAN 1 -2.6438 15.9946 SLSLPGPSPPPDGTE-p Q9BZQ8;S646-p SLSLPGPSPPPDGTE 0.181245294135483 0.344851518675479 -0.255333333333333 -0.104666666666667 14.6201096626817 6.12629087156199 -0.255333333333333 -0.104666666666667 0.0345135024302219 0.243989374048101 -2.80750142351878 -1.30671316864345 Q9BZQ8 FAM129A Q9BZQ8.S646.p_FAM129A Q9BZQ8_S646s _1_1_646_646 Q9BZQ8 Q9BZQ8 Protein Niban HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23341.23341.3 15.99 15.99 7.339 5 1 1 0 881.4473 2562.3613 S646s TMT10 637 (K) GESLSLPGPsPPPDGTEQVIISR (V) GES(0.0)LS(0.0)LPGPS(0.99)PPPDGT(0.0)EQVIIS(0.0)R s:Phosphorylated S FAM129A 104102.7 1 5 641.1 254.96 HUMAN 1 -14.6201 -6.1263 SLSLSEESPSKETSL-p E9PGC8;S1441-p SLSLSEESPSKETSL 0.577853582650898 0.960003970681119 -0.093 0.00533333333333337 4.38244257363414 0.255309041625335 -0.093 0.00533333333333337 0.364548858462478 0.942907512279418 -0.989563634248047 0.0749955950156894 E9PGC8 NotFound E9PGC8.S1441.p_NotFound E9PGC8_S1441s _1_1_1441_1441 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21533.21533.5 25.73 23.55 1.111 11 1 1 0 864.2305 4237.1603 S1441s TMT10 1422 (K) DRWPEVSPEDTQSLSLSEEsPSKETSLDVSSK (Q) DRWPEVS(0.0)PEDT(0.0)QS(0.0)LS(0.0)LS(0.0)EES(0.99)PS(0.0)KET(0.0)S(0.0)LDVS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S MAP1A 332906.7 5 24 20.1 1016.98 HUMAN 1 -4.3824 0.2553 SLSNLQVTQPTVGMN-p P08708;T120-p SLSNLQVTQPTVGMN 0.96472530859038 0.0526657241444228 -0.00833333333333334 -0.265 0.301925323922716 17.0564122312403 -0.00833333333333334 -0.265 0.932840660126755 0.0196951266037614 -0.0882649766911698 -3.27125093742062 P08708 RPS17 P08708.T120.p_RPS17 P08708_T120t _1_1_120_120 P08708 P08708 40S ribosomal protein S17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.33534.33534.3 16.59 16.59 1.128 5 1 1 0 1101.2493 3221.7757 T120t TMT10 108 (K) LLDFGSLSNLQVtQPTVGMNFKTPR (G) LLDFGS(0.0)LS(0.0)NLQVT(0.99)QPT(0.0)VGMNFKT(0.0)PR K:TMT10,t:Phosphorylated T RPS17 15606.9 4 3 2548.1 78.98 HUMAN 1 -0.3019 -17.0564 SLSNQPGTPRDDGEM-p A0A087X159;T341-p SLSNQPGTPRDDGEM 0.167474891729899 0.172411197899548 0.340666666666667 0.216333333333333 15.513929236461 10.0359873676247 0.340666666666667 0.216333333333333 0.0280935794137589 0.099174783993597 2.97540628855973 1.98715655019587 A0A087X159 SSBP2 A0A087X159.T341.p_SSBP2 A0A087X159_T341t _1_1_341_341 A0A087X159 A0A087X159|P81877|P81877-3 Single-stranded DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8710.8710.3 9.89 9.89 1.241 4 1 1 0 674.9827 1942.9602 T341t TMT10 328 (K) NSPNNMSLSNQPGtPR (D) NS(0.0)PNNMS(0.0)LS(0.0)NQPGT(0.99)PR t:Phosphorylated T SSBP2 38925.1 1 1 3623.1 46.68 HUMAN 1 15.5139 10.036 SLSPRAGSPFSPPPS-p Q96JY6-5;S384-p SLSPRAGSPFSPPPS 0.389389394272965 0.0398624788620018 -0.127 0.264666666666667 7.57583155571344 18.7648466372277 -0.127 0.264666666666667 0.174749863196361 0.0132897048634357 -1.56147964841026 3.6156239098196 Q96JY6 PDLIM2 Q96JY6.5.S384.p_PDLIM2 Q96JY6-5_S384s _1_1_384_384 Q96JY6-5 Q96JY6-5|Q96JY6-3|Q96JY6-4|Q96JY6-2 Isoform 5 of PDZ and LIM domain protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18910.18910.2 14.78 9.26 1.224 8 1 1 0 1206.5873 2332.1982 S384s TMT10 382 (R) AGsPFSPPPSSSSLTGEAAISR (S) AGS(0.99)PFS(0.0)PPPS(0.0)S(0.0)S(0.0)S(0.0)LT(0.0)GEAAIS(0.0)R s:Phosphorylated S PDLIM2 63315 3 6 1306.1 155.86 HUMAN 1 -7.5758 18.7648 SLSPRPASPKAQWPQ-p M0QXA7;S201-p SLSPRPASPKAQWPQ 0.300468131536679 0.00868479616614982 -0.230333333333333 0.426 9.81773377796059 29.2306749379725 -0.230333333333333 0.426 0.104286147018452 0.00119380256093857 -1.95006129752717 6.1919422274879 M0QXA7 WIZ M0QXA7.S201.p_WIZ M0QXA7_S201s _1_1_201_201 M0QXA7 O95785|M0QXA7|O95785-3|O95785-4|B9EGQ5 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14042.14042.2 14.39 7.09 2.163 4 1 1 0 1002.0577 1923.1428 S201s TMT10 190 (K) SPQLSLSPRPAsPK (A) S(0.0)PQLS(0.0)LS(0.0)PRPAS(0.99)PK K:TMT10,s:Phosphorylated S WIZ 104190.1 9 4 195.1 461.51 HUMAN 1 -9.8177 29.2307 SLSPRPDSPQPRHGS-p Q8TAP8;S52-p SLSPRPDSPQPRHGS 0.824817850402609 0.734474449700073 -0.097 -0.0623333333333333 1.61363367256448 1.84812247669698 -0.0970000000000001 -0.0623333333333333 0.689662532751319 0.653412972293415 -0.421430265901364 -0.474845015388001 Q8TAP8 PPP1R35 Q8TAP8.S52.p_PPP1R35 Q8TAP8_S52s _1_1_52_52 Q8TAP8 Q8TAP8 Protein phosphatase 1 regulatory subunit 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26592.26592.4 26.98 23.05 1.188 4 1 1 0 1232.6251 4847.5165 S52s TMT10 12 (K) SADGEEAAAVPGPPPEPQVPQLRAPVPEPGLDLSLSPRPDsPQPR (H) S(0.0)ADGEEAAAVPGPPPEPQVPQLRAPVPEPGLDLS(0.0)LS(0.0)PRPDS(0.99)PQPR s:Phosphorylated S PPP1R35 28123.8 1 2 2252.1 91.23 HUMAN 1 -1.6136 -1.8481 SLSPSKKSPVGKSPP-p Q9Y2W1;S315-p SLSPSKKSPVGKSPP 0.272455389487987 0.0217596155400949 -0.229 0.430666666666667 10.6962332141607 22.7252700480557 -0.229 0.430666666666667 0.0851876579815551 0.00533916073179905 -2.10297313074528 4.48483465655006 Q9Y2W1 THRAP3 Q9Y2W1.S315.p_THRAP3 Q9Y2W1_S315sS320s_2_2_315_320 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13164.13164.4 7.45 2.51 6.035 13 2 2 0 1038.5156 3991.1066 S315s S320s TMT10 315 (K) sPVGKsPPSTGSTYGSSQKEESAASGGAAYTK (R) S(0.99)PVGKS(0.99)PPS(0.0)T(0.0)GS(0.0)T(0.0)Y(0.0)GS(0.0)S(0.0)QKEES(0.0)AAS(0.0)GGAAY(0.0)T(0.0)K K:TMT10,s:Phosphorylated S THRAP3 108720.9 4 91 10.2 1293.04 HUMAN 1 -10.6962 22.7253 SLSPSPPSPLEKTPL-p P46821;S1265-p SLSPSPPSPLEKTPL 0.196058125449831 0.0339566328439142 -0.2 -0.292666666666667 13.7871119964917 19.8006071459893 -0.2 -0.292666666666667 0.0418108310973029 0.0104698216915663 -2.65391445452263 -3.83274768344562 P46821 MAP1B P46821.S1265.p_MAP1B P46821_S1265s _1_1_1265_1265 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18464.18464.3 14.8 14.81 4.204 5 1 1 0 654.3501 1881.0734 S1265s TMT10 1256 (K) SPSLSPSPPsPLEK (T) S(0.0)PS(0.0)LS(0.0)PS(0.0)PPS(0.99)PLEK K:TMT10,s:Phosphorylated S MAP1B 271827.6 2 10 210.1 442.48 HUMAN 1 -13.7871 -19.8006 SLSRKTVSLEHLQRE-p Q96SN8;S1490-p SLSRKTVSLEHLQRE 0.820292136365904 0.364030872794028 -0.035 0.102333333333333 1.65726232115182 5.8175225362062 -0.035 0.102333333333333 0.682768958211017 0.261967699544481 -0.4314875704024 1.25169834503409 Q96SN8 CDK5RAP2 Q96SN8.S1490.p_CDK5RAP2 Q96SN8_S1490s _1_1_1490_1490 Q96SN8 Q96SN8|Q96SN8-2|Q96SN8-3|Q96SN8-4|A0A0A0MRG9 CDK5 regulatory subunit-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11438.11438.2 11.83 11.83 1.422 2 1 1 0 696.3663 1311.7582 S1490s TMT10 1488 (K) TVsLEHLQR (E) T(0.0)VS(0.99)LEHLQR s:Phosphorylated S CDK5RAP2 216574.2 3 8 932.1 199.16 HUMAN 1 -1.6573 5.8175 SLSRSKNSPMEFFRI-p Q96S38;S596-p SLSRSKNSPMEFFRI 0.0871878154630908 0.0221420189415373 -0.332333333333333 -0.314666666666667 22.5802698110642 22.6083929229204 -0.332333333333333 -0.314666666666667 0.00552043141821158 0.00548479888611404 -4.45589865806527 -4.45757452924279 Q96S38 RPS6KC1 Q96S38.S596.p_RPS6KC1 Q96S38_S596s _1_1_596_596 Q96S38 Q96S38|Q96S38-2|F6RJM5|F5H7T0|A0A087X1U5 Ribosomal protein S6 kinase delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21562.21562.4 10.7 6.32 1.974 3 1 1 0 614.0771 2373.3204 S596s TMT10 593 (R) SKNsPMEFFRIDSK (D) S(0.0)KNS(0.99)PMEFFRIDS(0.0)K K:TMT10,s:Phosphorylated S RPS6KC1 119593.1 4 14 253.1 405.38 HUMAN 1 -22.5803 -22.6084 SLSSTDVSPNQSNTS-p Q99550;S395-p SLSSTDVSPNQSNTS 0.653780563370571 0.0727112126621179 0.0616666666666667 -0.207666666666667 3.46038217286872 15.1279664926601 0.0616666666666667 -0.207666666666667 0.450777035068324 0.0307045934030759 0.812465604939189 -2.90057344494909 Q99550 MPHOSPH9 Q99550.S395.p_MPHOSPH9 Q99550_S395s _1_1_395_395 Q99550 Q99550|Q99550-2|A0A0A0MTP3 M-phase phosphoprotein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28338.28338.4 16.26 16.26 1.504 10 1 1 0 923.9843 3612.9398 S395s TMT10 385 (K) TFISLSSTDVsPNQSNTSNEMKLPSLK (D) T(0.0)FIS(0.0)LS(0.0)S(0.0)T(0.0)DVS(0.99)PNQS(0.0)NT(0.0)S(0.0)NEMKLPS(0.0)LK K:TMT10,s:Phosphorylated S MPHOSPH9 133763.4 3 2 1356.1 150.46 HUMAN 1 3.4604 -15.128 SLSSVPISPYKDEPW-p Q9Y676;S49-p SLSSVPISPYKDEPW 0.16127524660131 0.244605031417522 -0.395333333333333 0.137666666666667 15.8629749254554 8.0590737098303 -0.395333333333333 0.137666666666667 0.025924029528165 0.156348107600887 -3.04192402096467 1.64488137843265 Q9Y676 MRPS18B Q9Y676.S49.p_MRPS18B Q9Y676_S49s _1_1_49_49 Q9Y676 Q9Y676|A0A0G2JIC6 28S ribosomal protein S18b, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23879.23879.3 17.99 17.99 2.413 6 1 1 0 1076.8795 3148.6657 S49s TMT10 36 (K) APSEEDSLSSVPIsPYKDEPWK (Y) APS(0.0)EEDS(0.0)LS(0.0)S(0.0)VPIS(0.99)PY(0.0)KDEPWK K:TMT10,s:Phosphorylated S MRPS18B 29737.4 3 2 4028.1 38.89 HUMAN 1 -15.863 8.0591 SLSSVTPSPTPENEK-p Q92870-4;S342-p SLSSVTPSPTPENEK 0.124850140124064 0.0882139835366017 -0.318333333333333 0.205333333333333 18.795896644943 13.9582380740633 -0.318333333333333 0.205333333333333 0.0131950285885369 0.0401953849824067 -3.62516903387925 2.68365008112129 Q92870 APBB2 Q92870.4.S342.p_APBB2 Q92870-4_S342s _1_1_342_342 Q92870-4 Q92870-4 Isoform 4 of Amyloid-beta A4 precursor protein-binding family B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13730.13730.3 16.03 16.03 2.691 6 1 1 0 723.3681 2088.1225 S342s TMT10 334 (K) GSLSSVTPsPTPENEK (Q) GS(0.0)LS(0.0)S(0.0)VT(0.0)PS(0.99)PT(0.0)PENEK K:TMT10,s:Phosphorylated S APBB2 84356.2 1 13 667.1 249.66 HUMAN 1 -18.7959 13.9582 SLSTSGESLYHVLGL-p Q9H3Z4;S15-p SLSTSGESLYHVLGL 0.0922379394545988 0.00507942483656417 -0.642 0.779 22.0467250341497 33.4211284233428 -0.642 0.779 0.00624205364295715 0.000454869856379488 -4.33262230421554 7.5306632289224 Q9H3Z4 DNAJC5 Q9H3Z4.S15.p_DNAJC5 Q9H3Z4_S15s _1_1_15_15 Q9H3Z4 Q9H3Z4|Q9H3Z4-2 DnaJ homolog subfamily C member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28191.28191.3 16.09 16.09 2.187 6 1 1 0 782.0788 2264.2538 S15s TMT10 8 (R) SLSTSGEsLYHVLGLDK (N) S(0.0)LS(0.0)T(0.0)S(0.0)GES(0.99)LY(0.0)HVLGLDK K:TMT10,s:Phosphorylated S DNAJC5 22947.1 1 2 3479.1 50 HUMAN 1 -22.0467 33.4211 SLTPKGLSPAMSPAL-p Q96DF8;S391-p SLTPKGLSPAMSPAL 0.886118944763575 0.150957672199772 0.0286666666666667 0.151666666666667 1.02514838913255 10.7982688159044 0.0286666666666666 0.151666666666667 0.789741865149045 0.0832095394759793 0.280174794055477 2.11986847255365 Q96DF8 DGCR14 Q96DF8.S391.p_DGCR14 Q96DF8_S391s _1_1_391_391 Q96DF8 Q96DF8 Protein DGCR14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16636.16636.3 7.14 7.14 7.137 2 1 1 0 512.9324 1456.8144 S391s TMT10 389 (K) GLsPAMSPALQR (L) GLS(0.99)PAMS(0.0)PALQR s:Phosphorylated S DGCR14 52624.2 1 6 924.1 199.86 HUMAN 1 1.0251 10.7983 SLTRSPVSPLAAQGI-p Q96SI1;S38-p SLTRSPVSPLAAQGI 0.293180007917268 0.362272965251925 -0.152 -0.110333333333333 10.055264226757 5.84961028044499 -0.152 -0.110333333333333 0.0987355562753627 0.260039290218703 -1.99131340707246 -1.25743405663165 Q96SI1 KCTD15 Q96SI1.S38.p_KCTD15 Q96SI1_S38s _1_1_38_38 Q96SI1 Q96SI1|Q96SI1-2 BTB/POZ domain-containing protein KCTD15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30998.30998.3 19.7 19.7 2.337 3 1 1 0 809.4653 2346.4161 S38s TMT10 35 (R) SPVsPLAAQGIPLPAQLTK (S) S(0.0)PVS(0.99)PLAAQGIPLPAQLT(0.0)K K:TMT10,s:Phosphorylated S KCTD15 32283.9 2 3 2985.1 64.05 HUMAN 1 -10.0553 -5.8496 SLTSDASSPRSYVSP-p Q9BTA9;S446-p SLTSDASSPRSYVSP 0.278970775596523 0.0710896873724867 0.182333333333333 0.213 10.4800787409992 15.2654701812531 0.182333333333333 0.213 0.0895348532030618 0.0297476718352971 2.06525415723803 2.92643898430064 Q9BTA9 WAC Q9BTA9.S446.p_WAC Q9BTA9_S446s _1_1_446_446 Q9BTA9 Q9BTA9|Q9BTA9-2|Q9BTA9-5|A0A0A0MRT2 WW domain-containing adapter protein with coiled-coil HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37885.37885.3 30.73 28.36 1.102 14 1 1 0 1573.1022 4637.3355 S446s TMT10 406 (K) FLTAGPSAFNITSLISQAAQLSTQAQPSNQSPMSLTSDASsPR (S) FLT(0.0)AGPS(0.0)AFNIT(0.0)S(0.0)LIS(0.0)QAAQLS(0.0)T(0.0)QAQPS(0.0)NQS(0.0)PMS(0.0)LT(0.0)S(0.0)DAS(0.0)S(0.99)PR s:Phosphorylated S WAC 71065.3 31 6 918.1 200.44 HUMAN 1 10.4801 15.2655 SLVAKQESVVRRASR-p Q9NQS7;S330-p SLVAKQESVVRRASR 0.557684345085016 0.00610513292104681 0.122666666666667 -0.870666666666667 4.68342225496332 31.9369565112148 0.122666666666667 -0.870666666666667 0.340140052575566 0.000640183311865643 1.04571053757193 -7.03168656207953 Q9NQS7 INCENP Q9NQS7.S330.p_INCENP Q9NQS7_S330s _1_1_330_330 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15382.15382.3 11.99 11.99 7.083 3 1 1 0 639.6912 1837.0948 S330s TMT10 322 (K) YSLVAKQEsVVR (R) Y(0.0)S(0.0)LVAKQES(0.99)VVR K:TMT10,s:Phosphorylated S INCENP 105826.3 1 15 138.1 524.38 HUMAN 1 4.6834 -31.937 SLVDKENTPPALSGT-p P31350;T33-p SLVDKENTPPALSGT 0.407878856431238 0.00101755219513798 -0.126333333333333 -1.67433333333333 7.18645196775182 52.058616671496 -0.126333333333333 -1.67433333333333 0.191141417862244 6.2249853379368e-06 -1.49361279932015 -17.1519123404026 P31350 RRM2 P31350.T33.p_RRM2 P31350_T33t_1_1_33_33 P31350 P31350-2|A0A286YFD6 Ribonucleoside-diphosphate reductase subunit M2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19763.19763.4 11.73 11.73 5.035 4 1 1 0 599.3273 2313.3178 N32n T33t TMT10 24 (K) GLSLVDKEntPPALSGTR (V) GLS(0.0)LVDKEN(1.0)T(0.99)PPALS(0.0)GT(0.0)R K:TMT10,n:Deamidated,t:Phosphorylated T RRM2 45162.1 1 2 3089.1 61.01 HUMAN 1 -7.1865 -52.0586 SLVIFEESDDEQEKG-p Q6NT04;S357-p SLVIFEESDDEQEKG 0.962854260146885 0.00623118177103645 -0.012 0.605666666666667 0.317039365880271 31.7761564364225 -0.012 0.605666666666667 0.929599889477697 0.000664330751808286 -0.092538285182589 6.97932750197347 Q6NT04 TIGD7 Q6NT04.S357.p_TIGD7 Q6NT04_S357s _1_1_357_357 Q6NT04 Q6NT04|Q6NT04-2 Tigger transposable element-derived protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25437.25437.4 12.42 12.42 5.332 2 1 1 0 809.403 3154.6246 S357s TMT10 346 (K) QLEESLVIFEEsDDEQEKGDK (G) QLEES(0.0)LVIFEES(0.99)DDEQEKGDK K:TMT10,s:Phosphorylated S TIGD7 63805.8 1 1 6319.1 12.42 HUMAN 1 -0.317 31.7762 SLVIKWNSPPYVCST-p P48552;S579-p SLVIKWNSPPYVCST 0.259311710735691 0.230776669890078 -0.221666666666667 -0.159333333333333 11.1319139586915 8.38701031314471 -0.221666666666667 -0.159333333333333 0.0770563802690845 0.144976953266581 -2.17923581317629 -1.70167198073974 P48552 NRIP1 P48552.S579.p_NRIP1 P48552_S579s _1_1_579_579 P48552 P48552 Nuclear receptor-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18067.18067.3 14.98 14.98 2.458 5 1 1 0 741.0184 2141.0738 S579s TMT10 577 (K) WNsPPYVCSTQSEK (L) WNS(0.99)PPY(0.0)VCS(0.0)T(0.0)QS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NRIP1 127738.5 1 7 807.1 221.77 HUMAN 1 -11.1319 -8.387 SLVKELHSAEEGAEE-p E7EVB6;S601-p SLVKELHSAEEGAEE 0.884436508440204 0.871067048264114 -0.026 0.0173333333333333 1.05315278896585 0.844478550718457 -0.026 0.0173333333333334 0.784665794571542 0.82328868172318 -0.287158612094971 0.234376649364557 E7EVB6 DTNB E7EVB6.S601.p_DTNB E7EVB6_S601s_1_1_601_601 E7EVB6 O60941|E7EVB6|E9PEY4 Dystrobrevin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15884.15884.4 25.01 25.01 99 1 1 1 0 761.3625 2961.4715 S601s N615n TMT10 598 (K) ELHsAEEGAEEEEEKMQnGK (D) ELHS(1.0)AEEGAEEEEEKMQN(1.0)GK K:TMT10,s:Phosphorylated S,n:Deamidated DTNB 71367.3 4 6 792.3 224.62 HUMAN 1 -1.0532 0.8445 SLVKELNSEVGSETE-p Q9Y4J8-15;S577-p SLVKELNSEVGSETE 0.207537307622837 0.688476025649689 -0.234666666666667 0.0496666666666667 13.1760469392658 2.22036149644488 -0.234666666666667 0.0496666666666667 0.0481277220115708 0.599741153144088 -2.54283856640029 0.557000575246695 Q9Y4J8 DTNA Q9Y4J8.15.S577.p_DTNA Q9Y4J8-15_S577s _1_1_577_577 Q9Y4J8-15 Q9Y4J8|Q9Y4J8-15|Q9Y4J8-14|Q9Y4J8-2|Q9Y4J8-13 Isoform 15 of Dystrobrevin alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18660.18660.3 17.58 17.58 3.391 5 1 1 0 836.705 2428.1313 S577s TMT10 574 (K) ELNsEVGSETESNVDSEFAR (T) ELNS(0.99)EVGS(0.0)ET(0.0)ES(0.0)NVDS(0.0)EFAR s:Phosphorylated S DTNA 83008.6 1 20 792.1 224.62 HUMAN 1 -13.176 2.2204 SLVKYYYSWKKTRSR-p Q9P2K3-3;S187-p SLVKYYYSWKKTRSR 0.422027476301534 0.370638833057348 -0.150333333333333 0.105 6.90056226929117 5.71710018009726 -0.150333333333333 0.105 0.204147362350421 0.268095782486569 -1.44359569198593 1.23371819741193 Q9P2K3 RCOR3 Q9P2K3.3.S187.p_RCOR3 Q9P2K3-3_S187s _1_1_187_187 Q9P2K3-3 Q9P2K3-3|Q8IZ40|Q9P2K3-4|Q9P2K3-2|B4DV59 Isoform 3 of REST corepressor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17054.17054.3 9.66 9.66 9.655 4 1 1 0 602.326 1724.9979 S187s TMT10 184 (K) YYYsWKK (T) Y(0.0)Y(0.0)Y(0.0)S(0.99)WKK K:TMT10,s:Phosphorylated S RCOR3 61384.5 2 3 1817.1 112.96 HUMAN 1 -6.9006 5.7171 SLVNNPKTPPDGKSH-p Q9HCM1;T1240-p SLVNNPKTPPDGKSH 0.79382020749629 0.0285989114629691 0.04 -0.295 1.9353779367064 20.9064415183955 0.04 -0.295 0.640416048127232 0.00811625807859987 0.494442981734707 -4.07220678098752 Q9HCM1 KIAA1551 Q9HCM1.T1240.p_KIAA1551 Q9HCM1_T1240t _1_1_1240_1240 Q9HCM1 Q9HCM1 Uncharacterized protein KIAA1551 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12265.12265.4 11.1 11.1 7.324 2 1 1 0 534.3019 2054.2213 T1240t TMT10 1233 (K) SLVNNPKtPPDGK (S) S(0.0)LVNNPKT(0.99)PPDGK K:TMT10,t:Phosphorylated T KIAA1551 196679.6 1 6 1693.1 120.71 HUMAN 1 1.9354 -20.9064 SLVPGTHTPPIRRRS-p Q9C0D0;T104-p SLVPGTHTPPIRRRS 0.370385892620223 0.0639903266232231 0.138 0.275333333333333 7.99804522970178 15.894195121247 0.138 0.275333333333333 0.158560671740881 0.0257383372929981 1.63482150609472 3.04576638332271 Q9C0D0 PHACTR1 Q9C0D0.T104.p_PHACTR1 Q9C0D0_T104t _1_1_104_104 Q9C0D0 Q9C0D0|Q9C0D0-2 Phosphatase and actin regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13285.13491.3 15.75 15.75 1.587 4 1 1 0 595.9749 1705.9435 T104t TMT10 95 (R) SDSLVPGTHtPPIR (R) S(0.0)DS(0.0)LVPGT(0.0)HT(0.99)PPIR t:Phosphorylated T PHACTR1 66763.3 8 6 638.1 255.38 HUMAN 1 7.998 15.8942 SLVPVDKSDDELKKV-p Q9NYY8;S126-p SLVPVDKSDDELKKV 0.525170023338528 0.456997943722006 0.086 0.0726666666666667 5.17523211076802 4.53415032711526 0.086 0.0726666666666667 0.303722376172813 0.352034289329324 1.13607548462481 1.01776212246459 Q9NYY8 FASTKD2 Q9NYY8.S126.p_FASTKD2 Q9NYY8_S126s _1_1_126_126 Q9NYY8 Q9NYY8|Q9NYY8-2 FAST kinase domain-containing protein 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18860.18860.3 14.71 8.39 4.61 2 1 1 0 780.7605 2260.3003 S126s TMT10 118 (K) QSLVPVDKsDDELK (K) QS(0.0)LVPVDKS(0.99)DDELK K:TMT10,s:Phosphorylated S FASTKD2 82431.4 4 1 2990.1 63.94 HUMAN 1 5.1752 4.5342 SLVQRRFSEGVLQSP-p Q9C0C2;S429-p SLVQRRFSEGVLQSP 0.323878615336012 0.0095765672413085 0.16 0.741 9.16937898182645 28.4685761891829 0.16 0.741 0.121077125506772 0.00142279516631867 1.8376872520044 5.97054829221521 Q9C0C2 TNKS1BP1 Q9C0C2.S429.p_TNKS1BP1 Q9C0C2_S429s _1_1_429_429 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14533.14533.3 19.6 19.6 5.906 3 1 1 0 791.734 2293.2188 S429s TMT10 427 (R) RFsEGVLQSPSQDQEK (L) RFS(0.99)EGVLQS(0.0)PS(0.0)QDQEK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 2 14 4.1 2105.7 HUMAN 1 9.1694 28.4686 SLVSANDSPSGMQTR-p Q5UIP0;S2161-p SLVSANDSPSGMQTR 0.260789944862731 0.171498053455762 0.162333333333333 -0.154333333333333 11.0593240231893 10.0666036174539 0.161849932057633 -0.154333333333333 0.0783551592620502 0.0984780948679764 2.16650567583464 -1.99247241055371 Q5UIP0 RIF1 Q5UIP0.S2161.p_RIF1 Q5UIP0_S2161s _1_1_2161_2161 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18735.18735.3 20.46 20.46 1.607 5 1 1 0 771.6946 2233.0968 S2161s TMT10 2150 (R) ELDPSLVSANDsPSGMQTR (C) ELDPS(0.0)LVS(0.0)ANDS(0.99)PS(0.0)GMQT(0.0)R s:Phosphorylated S RIF1 276628.8 5 27 29.1 922.06 HUMAN 1 11.0593 -10.0666 SLWKEFETPEKANKI-p Q9Y2X3;T34-p SLWKEFETPEKANKI 0.82619699417303 0.12344433166707 -0.042 -0.188 1.59998953092292 11.9858334022321 -0.042 -0.188 0.691832638644591 0.0633018875026689 -0.418274358435513 -2.32866178845284 Q9Y2X3 NOP58 Q9Y2X3.T34.p_NOP58 Q9Y2X3_T34t _1_1_34_34 Q9Y2X3 Q9Y2X3|F8WED0 Nucleolar protein 58 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26532.26532.5 21.85 21.85 10.216 2 1 1 0 621.3448 3022.7271 T34t TMT10 21 (K) KLQEVDSLWKEFEtPEK (A) KLQEVDS(0.0)LWKEFET(0.99)PEK K:TMT10,t:Phosphorylated T NOP58 60090.6 5 1 481.1 298.21 HUMAN 1 -1.6 -11.9858 SLWKSVFSGYKKDKK-p Q7RTP6;S1745-p SLWKSVFSGYKKDKK 0.248798577375663 0.00372578897340773 -0.185333333333333 -0.895666666666667 11.531598749171 36.04462699177 -0.185333333333333 -0.895666666666667 0.070281354859672 0.000248620709120609 -2.24951795078862 -8.48684382495569 Q7RTP6 MICAL3 Q7RTP6.S1745.p_MICAL3 Q7RTP6_S1745s _1_1_1745_1745 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15830.15830.3 9.49 9.49 9.487 3 1 1 0 561.6547 1602.9822 S1745s TMT10 1742 (K) SVFsGYKK (D) S(0.0)VFS(0.99)GY(0.0)KK K:TMT10,s:Phosphorylated S MICAL3 225431.9 1 21 190.1 466.81 HUMAN 1 -11.5316 -36.0446 SLYKLVGSPPWKEAF-p Q86UA6-8;S18-p SLYKLVGSPPWKEAF 0.202379079896646 0.00475341800540323 0.383666666666667 -1.03066666666667 13.4610819347865 33.9644764348128 0.383666666666667 -1.03066666666667 0.0450704408957577 0.000401376883472602 2.59449285956264 -7.72067202496466 Q86UA6 RPAIN Q86UA6.8.S18.p_RPAIN Q86UA6-8_S18s _1_1_18_18 Q86UA6-8 Q86UA6-8|A0A0A0MSE7|A0A0B4J1T3 Isoform 8 of RPA-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23556.23556.2 12.54 8.6 99 1 1 1 0 711.4009 1341.8295 S18s TMT10 15 (K) LVGsPPWK (E) LVGS(1.0)PPWK K:TMT10,s:Phosphorylated S RPAIN 26848 6 2 4243.1 34.86 HUMAN 1 13.4611 -33.9645 SLYRREESLEKEPEY-p Q8WUM0;S755-p SLYRREESLEKEPEY 0.897204271827988 0.69839497299098 0.0216666666666667 -0.0643333333333333 0.923629233959212 2.14291231586305 0.0216666666666667 -0.0643333333333333 0.808420050909682 0.610532473371698 0.254610367521783 -0.540159043739015 Q8WUM0 NUP133 Q8WUM0.S755.p_NUP133 Q8WUM0_S755s _1_1_755_755 Q8WUM0 Q8WUM0 Nuclear pore complex protein Nup133 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19023.19023.4 11.76 11.76 5.571 5 1 1 0 807.4121 3146.6523 S755s TMT10 752 (R) REEsLEKEPEYVPWTATSGPGGIR (T) REES(0.99)LEKEPEY(0.0)VPWT(0.0)AT(0.0)S(0.0)GPGGIR K:TMT10,s:Phosphorylated S NUP133 130003.6 1 14 652.1 254.15 HUMAN 1 0.9236 -2.1429 SMADTPMSPLLKGSL-p Q9H6A9;S238-p SMADTPMSPLLKGSL 0.985606509431769 0.587879200663396 0.00366666666666666 -0.219666666666667 0.127563552870564 3.11766010757159 0.00366666666666667 -0.219666666666667 0.971054588402477 0.487791231546331 0.0379942672615171 -0.744103918381893 Q9H6A9 PCNXL3 Q9H6A9.S238.p_PCNXL3 Q9H6A9_S238s _1_1_238_238 Q9H6A9 Q9H6A9|Q9H6A9-2 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36498.36498.5 19.58 19.58 2.734 12 1 1 0 1111.5508 5473.7435 S238s TMT10 192 (K) LIGDLPQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMsPLLK (G) LIGDLPQT(0.0)PPGAVPDPS(0.0)LAS(0.0)T(0.0)DS(0.0)S(0.0)EPS(0.0)PLAGDGAPWS(0.0)GS(0.0)S(0.0)MADT(0.0)PMS(0.99)PLLK K:TMT10,s:Phosphorylated S PCNX3 224430.8 1 8 168.1 492.45 HUMAN 1 0.1276 -3.1177 SMAQRARTMALYNPI-p A0A087WW63;T58-p SMAQRARTMALYNPI 0.691026542335788 0.549924210794757 0.0583333333333333 -0.0786666666666666 3.00945659632277 3.49530524303414 0.0583333333333333 -0.0786666666666667 0.500097104872838 0.447166721657945 0.722332386023544 -0.819211284013788 A0A087WW63 CACNA1A A0A087WW63.T58.p_CACNA1A A0A087WW63_T58tY62y_2_2_58_62 A0A087WW63 A0A087WW63|A0A1C7CYY9|A0A1B0GTN7|A0A1B0GU81|O00555-8|O00555-4|A0A1B0GUS3 Voltage-dependent P/Q-type calcium channel subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3444.3444.4 7.28 3.02 1.103 3 2 2 0 653.0642 2432.3216 T58t M59m Y62y N63n TMT10 50 (K) QSMAQRARtmALynPIPVR (Q) QS(0.0)M(0.0)AQRART(0.99)M(0.99)ALY(0.99)N(1.0)PIPVR t:Phosphorylated T,m:Oxidized methionine,y:Phosphorylated Y,n:Deamidated CACNA1A 284723.9 4 1 340.2 353.72 HUMAN 1 3.0095 -3.4953 SMDDHKLSLDELHRK-p P05023-4;S47-p SMDDHKLSLDELHRK 0.513801353921322 0.716859246129506 0.103333333333333 0.0436666666666667 5.34343993367558 1.98884010670644 0.103333333333333 0.0436666666666667 0.292183714980915 0.632580775518334 1.16663943559914 0.506270521559643 P05023 ATP1A1 P05023.4.S47.p_ATP1A1 P05023-4_S47s _1_1_47_47 P05023-4 P05023|P05023-4|P05023-3|P05023-2 Isoform 4 of Sodium/potassium-transporting ATPase subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14479.14479.5 17.65 17.65 6.588 2 1 1 0 564.7005 2739.5067 S47s TMT10 38 (K) EVSMDDHKLsLDELHRK (Y) EVS(0.0)MDDHKLS(0.99)LDELHRK K:TMT10,s:Phosphorylated S ATP1A1 114310.4 2 3 1313.1 155.17 HUMAN 1 5.3434 1.9888 SMDLRTKSTGGAPTF-p P07737;S92-p SMDLRTKSTGGAPTF 0.270224768390149 0.0618895264352358 -0.176333333333333 0.219666666666667 10.7690848929548 16.0875151164928 -0.173655028967966 0.219666666666667 0.0837705777507743 0.0246177574459188 -2.11570233205091 3.08281908771672 P07737 PFN1 P07737.S92.p_PFN1 P07737_S92s _1_1_92_92 P07737 P07737|K7EJ44 Profilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20090.20090.2 13.27 13.27 1.152 5 1 1 0 959.5117 1838.0424 S92s TMT10 92 (K) sTGGAPTFNVTVTK (T) S(0.99)T(0.0)GGAPT(0.0)FNVT(0.0)VT(0.0)K K:TMT10,s:Phosphorylated S PFN1 15225.1 8 5 1550.1 132.52 HUMAN 1 -10.7691 16.0875 SMDNTPHTPTPFKNA-p P10244;T518-p SMDNTPHTPTPFKNA 0.759104657690589 0.00153570152759703 0.0543333333333333 -0.971333333333333 2.29343941210585 45.373041891107 0.0543333333333333 -0.971333333333333 0.589733853157594 2.90198932728345e-05 0.572848439561151 -12.8337547387426 P10244 MYBL2 P10244.T518.p_MYBL2 P10244_T518t _1_1_518_518 P10244 P10244|P10244-2 Myb-related protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15910.15910.3 14.71 14.71 1.66 5 1 1 0 725.352 2094.073 T518t TMT10 510 (K) YSMDNTPHtPTPFK (N) Y(0.0)S(0.0)MDNT(0.0)PHT(0.99)PT(0.0)PFK K:TMT10,t:Phosphorylated T MYBL2 79390.3 2 12 752.1 231.53 HUMAN 1 2.2934 -45.373 SMDSSDLSDGAVTLQ-p Q9Y2X7;S417-p SMDSSDLSDGAVTLQ 0.807399255272832 0.436089780335632 0.0436666666666667 0.0816666666666667 1.78620511662183 4.80158764879775 0.0436666666666667 0.0816666666666667 0.662795404143115 0.331010092119588 0.460917247505094 1.06736082771869 Q9Y2X7 GIT1 Q9Y2X7.S417.p_GIT1 Q9Y2X7_S417s _1_1_417_417 Q9Y2X7 Q9Y2X7-3|A0A0C4DGN6|J3QRU8 ARF GTPase-activating protein GIT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30375.30375.4 20.84 20.84 3.138 6 1 1 0 799.9143 3116.664 S417s TMT10 410 (R) SMDSSDLsDGAVTLQEYLELKK (A) S(0.0)MDS(0.0)S(0.0)DLS(0.99)DGAVT(0.0)LQEY(0.0)LELKK K:TMT10,s:Phosphorylated S GIT1 85081.2 4 27 474.2 301.74 HUMAN 1 1.7862 4.8016 SMEDRGYSPDTRVVR-p O95049-3;S397-p SMEDRGYSPDTRVVR 0.696852709038782 0.584734654674724 0.054 -0.0756666666666666 2.94827201625301 3.14749232002382 0.054 -0.0756666666666667 0.507192471375643 0.484452016532706 0.709886036361931 -0.750105409000327 O95049 TJP3 O95049.3.S397.p_TJP3 O95049-3_S397s _1_1_397_397 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14190.14190.4 12.41 5.93 2.989 10 1 1 0 809.3612 3154.4585 S397s TMT10 377 (R) ESSYDIYRVPSSQSMEDRGYsPDTR (V) ES(0.0)S(0.0)Y(0.0)DIY(0.0)RVPS(0.0)S(0.0)QS(0.0)MEDRGY(0.0)S(0.99)PDT(0.0)R s:Phosphorylated S TJP3 103593.6 4 9 125.1 544.41 HUMAN 1 2.9483 -3.1475 SMFGSATTDNHNPMK-p E9PQ57;T23-p SMFGSATTDNHNPMK 0.386528379627285 0.90018758425285 -0.178 0.0146666666666667 7.64103003769801 0.638825064462969 -0.178 0.0146666666666666 0.172146023932708 0.863212048622672 -1.57281966078333 0.18063755288674 E9PQ57 NotFound E9PQ57.T23.p_NotFound E9PQ57_T23t_1_1_23_23 E9PQ57 E9PQ57|P78406|E9PPG9 mRNA export factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31193.31193.3 8.65 8.65 1.117 11 1 1 0 1097.4821 3209.4717 T23t N25n Acetyl 2 (M) SLFGTTSGFGTSGTSMFGSATtDnHNPMK (D) S(0.0)LFGT(0.0)T(0.0)S(0.0)GFGT(0.0)S(0.0)GT(0.0)S(0.0)MFGS(0.0)AT(0.0)T(0.99)DN(0.99)HN(0.0)PMK K:TMT10,t:Phosphorylated T,n:Deamidated RAE1 48743.9 1 1 6927.1 8.65 HUMAN 1 -7.641 0.6388 SMGLTPESPIVPPPM-p Q13409-2;S73-p SMGLTPESPIVPPPM 0.810447471146822 0.0796851246213352 0.0356666666666667 0.209 1.75334056392374 14.5796238449501 0.0356666666666667 0.209 0.667830029590568 0.0348367486848028 0.453457126837396 2.7982112692674 Q13409 DYNC1I2 Q13409.2.S73.p_DYNC1I2 Q13409-2_S73s _1_1_73_73 Q13409-2 Q13409-2|Q13409-3|Q13409-6 Isoform 2B of Cytoplasmic dynein 1 intermediate chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.35863.35863.4 27.25 22.16 3.498 6 1 1 0 833.6792 3251.7308 S73s TMT10 59 (R) EAEALLQSMGLTPEsPIVPPPMSPSSK (S) EAEALLQS(0.0)MGLT(0.0)PES(0.99)PIVPPPMS(0.0)PS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S DYNC1I2 71042.8 8 4 1616.1 127.25 HUMAN 1 1.7533 14.5796 SMGQRSYSFEASEED-p Q6NT76-5;S148-p SMGQRSYSFEASEED 0.445972173170048 0.00964139024199053 0.123 0.587333333333333 6.46809718717616 28.4182658309774 0.123 0.587333333333333 0.225522709831545 0.00143937321557088 1.36754598508957 5.95615279288845 Q6NT76 HMBOX1 Q6NT76.5.S148.p_HMBOX1 Q6NT76-5_S148s _1_1_148_148 Q6NT76-5 Q6NT76-5|Q6NT76-3|Q6NT76-2|H0YKJ1|E5RGZ2 Isoform 5 of Homeobox-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30408.30408.3 19.68 16.03 1.134 4 1 1 0 1048.8146 3064.4709 S148s TMT10 146 (R) SYsFEASEEDLDVDDKVEELMR (R) S(0.0)Y(0.0)S(0.99)FEAS(0.0)EEDLDVDDKVEELMR K:TMT10,s:Phosphorylated S HMBOX1 50037.1 3 2 2310.1 88.47 HUMAN 1 6.4681 28.4183 SMGTLENTFEGHKSK-p Q6P0N0;T702-p SMGTLENTFEGHKSK 0.210044301362565 0.451865028373067 0.234333333333333 -0.098 13.0766230065037 4.59775979529531 0.234333333333333 -0.098 0.0492422285306165 0.346915752540279 2.52488319025421 -1.02960703822633 Q6P0N0 MIS18BP1 Q6P0N0.T702.p_MIS18BP1 Q6P0N0_T702t _1_1_702_702 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13985.13985.3 19.69 16.14 6.582 3 1 1 0 663.657 1908.989 T702t TMT10 695 (K) SMGTLENtFEGHK (S) S(0.0)MGT(0.0)LENT(0.99)FEGHK K:TMT10,t:Phosphorylated T MIS18BP1 129996 2 26 54.1 728.39 HUMAN 1 13.0766 -4.5978 SMHNKSATYSVGMQK-p Q8IUC4;T606-p SMHNKSATYSVGMQK 0.842291647274574 0.09174904714775 0.0293333333333333 0.266333333333333 1.44039882702473 13.7207237110449 0.0293333333333333 0.266333333333333 0.717728376867873 0.0424548810971534 0.380970241357152 2.64023886251657 Q8IUC4 RHPN2 Q8IUC4.T606.p_RHPN2 Q8IUC4_T606t _1_1_606_606 Q8IUC4 Q8IUC4|A8MT19|Q8IUC4-2 Rhophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13180.13180.2 14.79 7.97 2.383 4 1 1 0 805.4067 1529.8398 T606t TMT10 604 (K) SAtYSVGMQK (T) S(0.0)AT(0.99)Y(0.0)S(0.0)VGMQK K:TMT10,t:Phosphorylated T RHPN2 77619.5 6 1 1611.1 127.64 HUMAN 1 1.4404 13.7207 SMHSLRISVGGLPVL-p Q8WVQ1;S21-p SMHSLRISVGGLPVL 0.406140557506172 0.0277238968700976 0.189666666666667 0.495 7.22507942094931 21.1085457905288 0.189666666666667 0.495 0.189448886885993 0.00774721165191503 1.50035750836154 4.11687120485011 Q8WVQ1 CANT1 Q8WVQ1.S21.p_CANT1 Q8WVQ1_S21s _1_1_21_21 Q8WVQ1 Q8WVQ1|Q8WVQ1-3|K7EN15|Q8WVQ1-2 Soluble calcium-activated nucleotidase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34226.34226.3 16.05 16.05 10.128 3 1 1 0 637.6959 1831.1127 S21s TMT10 20 (R) IsVGGLPVLASMTK (A) IS(0.99)VGGLPVLAS(0.0)MT(0.0)K K:TMT10,s:Phosphorylated S CANT1 44952.9 1 1 5817.1 16.05 HUMAN 1 7.2251 21.1085 SMHYPRISPTAGNQN-p Q8WXX7;S1198-p SMHYPRISPTAGNQN 0.418292592287951 0.100738914458146 -0.116666666666667 0.201 6.98498621979956 13.1687835676292 -0.116666666666667 0.201 0.200217197448748 0.0482082807172261 -1.45838487308817 2.54011041862739 Q8WXX7 AUTS2 Q8WXX7.S1198.p_AUTS2 Q8WXX7_S1198s _1_1_1198_1198 Q8WXX7 Q8WXX7|Q8WXX7-2|A0A087WVB5|Q8WXX7-5 Autism susceptibility gene 2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19242.19242.3 19.31 15.86 1.124 2 1 1 0 655.6921 1885.0907 S1198s TMT10 1197 (R) IsPTAGNQNGLLNK (T) IS(0.99)PT(0.0)AGNQNGLLNK K:TMT10,s:Phosphorylated S AUTS2 139379 12 8 684.1 243.98 HUMAN 1 -6.985 13.1688 SMKAFMESPKQILDS-p P46013;S1679-p SMKAFMESPKQILDS 0.159710954476212 0.00265134466421331 -0.266666666666667 -0.814 15.9550555179905 39.1880812288253 -0.266666666666667 -0.814 0.0253801654104799 0.000120556845901441 -3.0595652219432 -9.77209958910756 P46013 MKI67 P46013.S1679.p_MKI67 P46013_S1679s _1_1_1679_1679 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.32562.32766.3 23.88 23.88 7.829 5 1 1 0 950.1762 2768.5471 S1679s TMT10 1675 (K) AFMEsPKQILDSAASLTGSK (R) AFMES(0.99)PKQILDS(0.0)AAS(0.0)LT(0.0)GS(0.0)K K:TMT10,s:Phosphorylated S MKI67 360912.4 14 52 5.1 1918.46 HUMAN 1 -15.9551 -39.1881 SMKDKPRSPFSKIRD-p A0A1B0GTL5;S188-p SMKDKPRSPFSKIRD 0.581703121269256 0.0314410880455276 -0.097 -0.397333333333333 4.32989581106894 20.2953991888307 -0.097 -0.397333333333333 0.368986450592066 0.00934243491801852 -0.979687235267037 -3.93887950453035 A0A1B0GTL5 NotFound A0A1B0GTL5.S188.p_NotFound A0A1B0GTL5_S188s _1_1_188_188 A0A1B0GTL5 A0A1B0GTL5|Q9BXF6 Rab11 family-interacting protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8709.8709.4 11.68 11.68 4.577 2 1 1 0 458.0121 1749.0626 S188s TMT10 184 (K) DKPRsPFSK (I) DKPRS(0.99)PFS(0.0)K K:TMT10,s:Phosphorylated S RAB11FIP5 139038.8 2 3 714.1 238.09 HUMAN 1 -4.3299 -20.2954 SMKKKVLSDSEDEEK-p Q8WWQ0;S1281-p SMKKKVLSDSEDEEK 0.886027178849554 0.132179387390988 0.023 0.200333333333333 1.02944852678754 11.5851260778395 0.023 0.200333333333333 0.78896029454072 0.0694204448322554 0.281249054995812 2.25787513029255 Q8WWQ0 PHIP Q8WWQ0.S1281.p_PHIP Q8WWQ0_S1281sS1283s_2_2_1281_1283 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16056.16056.4 16.06 13.59 14.095 5 2 2 0 692.8136 2608.299 S1281s S1283s TMT10 1279 (K) VLsDsEDEEKDADVPGTSTR (K) VLS(0.99)DS(0.99)EDEEKDADVPGT(0.0)S(0.0)T(0.0)R K:TMT10,s:Phosphorylated S PHIP 208454.1 23 29 108.1 577.05 HUMAN 1 1.0294 11.5851 SMKTRRLSSASTGKP-p O75152;S758-p SMKTRRLSSASTGKP 0.111618830719723 0.0987295984972258 -0.292666666666667 0.180666666666667 19.8925011347678 13.2915495929046 -0.292666666666667 0.180666666666667 0.0102506141560598 0.0468646136110266 -3.85591784398166 2.56229403598115 O75152 ZC3H11A O75152.S758.p_ZC3H11A O75152_S758s _1_1_758_758 O75152 O75152|A0A1B0GUI2|A0A1B0GTU1 Zinc finger CCCH domain-containing protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18951.18951.3 14.99 14.99 1.172 5 1 1 0 977.5209 2850.5816 S758s TMT10 756 (R) RLsSASTGKPPLSVEDDFEK (L) RLS(0.99)S(0.0)AS(0.0)T(0.0)GKPPLS(0.0)VEDDFEK K:TMT10,s:Phosphorylated S ZC3H11A 89985.3 9 8 890.1 204.63 HUMAN 1 -19.8925 13.2915 SMLPAKASPVAESPK-p P78364;S664-p SMLPAKASPVAESPK 0.320215302539956 0.24952342541987 -0.136666666666667 0.119333333333333 9.2561638074094 7.94302532676178 -0.136666666666667 0.119333333333333 0.118681661939222 0.160582223592029 -1.85271552819717 1.62476431230997 P78364 PHC1 P78364.S664.p_PHC1 P78364_S664s _1_1_664_664 P78364 P78364 Polyhomeotic-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18302.18302.5 18.73 17.36 3.409 6 1 1 0 783.2065 3832.0253 S664s Hydrogen 642 (R) KADSEEERDDVSTLGSMLPAKAsPVAESPK (V) KADS(0.0)EEERDDVS(0.0)T(0.0)LGS(0.0)MLPAKAS(0.99)PVAES(0.0)PK K:TMT10-Lys-Only,s:Phosphorylated S PHC1 106159.3 1 3 1503.1 135.84 HUMAN 1 -9.2562 7.943 SMMHRQETVECLKKF-p Q13554;T287-p SMMHRQETVECLKKF 0.254772818874808 0.297064096289644 0.173333333333333 0.181 11.300077578138 6.95831167265041 0.173333333333333 0.181 0.0741296999374774 0.201450724085053 2.2087662493107 1.45331477911186 Q13554 CAMK2B Q13554.T287.p_CAMK2B Q13554_T287t _1_1_287_287 Q13554 Q13554|Q13554-2|Q13554-5|Q13554-8|Q13554-3 Calcium/calmodulin-dependent protein kinase type II subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14194.14194.3 14.51 14.51 3.32 4 1 1 0 849.0833 2465.2715 T287t TMT10 276 (R) STVASMMHRQEtVECLK (K) S(0.0)T(0.0)VAS(0.0)MMHRQET(0.99)VECLK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CAMK2B 73589.3 1 1 3471.1 50.18 HUMAN 1 11.3001 6.9583 SMMHRQETVECLRKF-p Q13555-8;T287-p SMMHRQETVECLRKF 0.558090717370634 0.0717130340570516 -0.113 0.201333333333333 4.67980771453054 15.210312769814 -0.113 0.201333333333333 0.340423261731696 0.0301278904159947 -1.04504032971863 2.91605370757771 Q13555 CAMK2G Q13555.8.T287.p_CAMK2G Q13555-8_T287t _1_1_287_287 Q13555-8 Q13555-6|A0A0A0MT11|Q13555-8|Q13555-2|Q13555-9|A0A0A0MS52|Q13555-7|Q13555-4|Q13555-5|Q13555-3|Q5SWX3|Q13555-10 Isoform 8 of Calcium/calmodulin-dependent protein kinase type II subunit gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12518.12518.3 16.88 16.88 5.093 4 1 1 0 782.0301 2264.1147 T287t TMT10 276 (R) STVASMMHRQEtVECLR (K) S(0.0)T(0.0)VAS(0.0)MMHRQET(0.99)VECLR C:Carbamidomethylation,t:Phosphorylated T CAMK2G 62905.2 10 6 1309.1 155.32 HUMAN 1 -4.6798 15.2103 SMNSRHNSWDTVNTV-p Q8N961;S67-p SMNSRHNSWDTVNTV 0.467528317100315 0.273971534600652 0.113 0.111666666666667 6.09792526570853 7.40759957325382 0.113 0.111666666666667 0.24558818722076 0.181651940957076 1.30198942355547 1.53174127465519 Q8N961 ABTB2 Q8N961.S67.p_ABTB2 Q8N961_S67s _1_1_67_67 Q8N961 Q8N961 Ankyrin repeat and BTB/POZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29816.29816.3 17.01 17.01 1.57 4 1 1 0 984.131 2870.4158 S67s TMT10 65 (R) HNsWDTVNTVLPEDPEVADLFSR (C) HNS(0.99)WDT(0.0)VNT(0.0)VLPEDPEVADLFS(0.0)R s:Phosphorylated S ABTB2 114795.2 2 2 3088.1 61.05 HUMAN 1 6.0979 7.4076 SMPAMRNSPTFKSFE-p J3KNE7;S149-p SMPAMRNSPTFKSFE 0.895249079123384 0.428466146337461 0.0276666666666666 -0.077 0.940506098097922 4.90014344740774 0.0276666666666667 -0.077 0.805284593184512 0.323582968812098 0.258887700619643 -1.08551101159847 J3KNE7 NotFound J3KNE7.S149.p_NotFound J3KNE7_S149s _1_1_149_149 J3KNE7 J3KNE7|Q16890|Q16890-5|E9PNK6 Tumor protein D53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14182.14182.3 13.63 13.63 1.631 4 1 1 0 748.0457 2162.1615 S149s TMT10 139 (R) HSISMPAMRNsPTFK (S) HS(0.0)IS(0.0)MPAMRNS(0.99)PT(0.0)FK K:TMT10,s:Phosphorylated S TPD52L1 23056.4 6 4 793.3 224.4 HUMAN 1 0.9405 -4.9001 SMQALGESPESSSSE-p Q03164-3;S2869-p SMQALGESPESSSSE 0.379137677424821 0.361826617608752 0.131 0.0876666666666667 7.78287927408786 5.85592353520956 0.131 0.0876666666666667 0.166614223172584 0.25966155076202 1.59747193125156 1.25856202946374 Q03164 KMT2A Q03164.3.S2869.p_KMT2A Q03164-3_S2869s _1_1_2869_2869 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29786.29786.4 23.86 23.86 3 8 1 1 0 1022.002 4005.0123 S2869s TMT10 2859 (K) NTPSMQALGEsPESSSSELLNLGEGLGLDSNREK (D) NT(0.0)PS(0.0)MQALGES(0.99)PES(0.0)S(0.0)S(0.0)S(0.0)ELLNLGEGLGLDS(0.0)NREK K:TMT10,s:Phosphorylated S KMT2A 436608.3 12 34 26.1 936.8 HUMAN 1 7.7829 5.8559 SMQDVDLSLGSPKLK-p Q09666;S508-p SMQDVDLSLGSPKLK 0.175358480804402 0.0507114805701827 -0.277333333333333 -0.354666666666667 15.0460836427306 17.2981628045256 -0.277333333333333 -0.354666666666667 0.0312889965749531 0.0186287502181948 -2.88709867512197 -3.31900848172626 Q09666 AHNAK Q09666.S508.p_AHNAK Q09666_S508s _1_1_508_508 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26303.26303.3 15.02 15.02 3.476 3 1 1 0 676.6882 1948.0825 S508s TMT10 500 (K) ISMQDVDLsLGSPK (L) IS(0.0)MQDVDLS(0.99)LGS(0.0)PK K:TMT10,s:Phosphorylated S AHNAK 629603.7 17 25 1.1 4313.36 HUMAN 1 -15.0461 -17.2982 SMQQLDPSPARKLLK-p Q9H410;S331-p SMQQLDPSPARKLLK 0.801994299573419 0.0359648549186556 -0.052 -0.268333333333333 1.84495530200617 19.4366761282122 -0.052 -0.268333333333333 0.653889659863581 0.0113849830187042 -0.474185772417598 -3.75569567644025 Q9H410 DSN1 Q9H410.S331.p_DSN1 Q9H410_S331s _1_1_331_331 Q9H410 Q9H410|Q9H410-4|Q9H410-2|Q5JW54|Q9H410-3 Kinetochore-associated protein DSN1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7885.7885.2 12.07 7.61 3.268 2 1 1 0 833.9149 1586.8522 S331s Hydrogen 324 (R) SMQQLDPsPARK (L) S(0.0)MQQLDPS(0.99)PARK K:TMT10-Lys-Only,s:Phosphorylated S DSN1 40408.8 7 8 1406.1 145.92 HUMAN 1 -1.845 -19.4367 SMREKRRSLQLPASP-p Q5VTI5;S862-p SMREKRRSLQLPASP 0.997321136371163 0.962290182291263 -0.000666666666666677 -0.00599999999999999 0.0206949347670623 0.237821702535505 -0.000666666666666691 -0.006 0.995246150651349 0.946711886027944 -0.00623825784625668 -0.0699882259200514 Q5VTI5 NotFound Q5VTI5.S862.p_NotFound Q5VTI5_S862s _1_1_862_862 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16427.16427.3 17.54 13.97 8.52 4 1 1 0 767.7354 2221.2178 S862s Hydrogen 862 (R) sLQLPASPAPDPSPRPAYK (V) S(0.99)LQLPAS(0.0)PAPDPS(0.0)PRPAY(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S PLEKHA6 119745.7 7 26 52.1 743.36 HUMAN 1 -0.0207 -0.2378 SMRNLKASLENSLRE-p P05783;S319-p SMRNLKASLENSLRE 0.346875076240835 0.0446424938319812 -0.254 0.434666666666667 8.54696599278706 18.071735290326 -0.254 0.434666666666667 0.139734421316891 0.0155892948414064 -1.72993872640969 3.47393936400219 P05783 KRT18 P05783.S319.p_KRT18 P05783_S319s _1_1_319_319 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17386.17386.3 7.57 7.57 7.566 2 1 1 0 595.001 1703.0216 S319s TMT10 315 (R) NLKAsLENSLR (E) NLKAS(0.99)LENS(0.0)LR K:TMT10,s:Phosphorylated S KRT18 48057 1 23 89.1 623.62 HUMAN 1 -8.547 18.0717 SMRSMQHSPNLRTYR-p O76041-2;S209-p SMRSMQHSPNLRTYR 0.0732937591551094 0.0200356433418179 -0.422666666666667 -0.326666666666667 24.3882693993364 23.2837024270651 -0.422666666666667 -0.326666666666667 0.00364060079899891 0.00469493687377823 -4.89049409605427 -4.61656334341946 O76041 NEBL O76041.2.S209.p_NEBL O76041-2_S209s _1_1_209_209 O76041-2 O76041|O76041-2 Isoform 2 of Nebulette HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4582.4582.3 11.36 11.36 3.18 2 1 1 0 460.2214 1298.6837 S209s TMT10 205 (R) SMQHsPNLR (T) S(0.0)MQHS(0.99)PNLR s:Phosphorylated S NEBL 31595 2 3 5139.1 22.49 HUMAN 1 -24.3883 -23.2837 SMRSTSGSPRPAGAK-p Q9H0E3-3;S709-p SMRSTSGSPRPAGAK 0.658417455592086 0.00215840414867258 0.0963333333333334 0.746 3.40587514812374 41.4255889878213 0.0963333333333333 0.746 0.456470257474191 7.20180074183908e-05 0.801710457890199 10.7915322236136 Q9H0E3 SAP130 Q9H0E3.3.S709.p_SAP130 Q9H0E3-3_S709s _1_1_709_709 Q9H0E3-3 Q9H0E3-3|H7BXF5|Q9H0E3-2 Isoform 3 of Histone deacetylase complex subunit SAP130 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4776.4776.3 10.12 10.12 2.072 4 1 1 0 703.3991 2028.2169 S709s TMT10 705 (R) STSGsPRPAGAKPK (S) S(0.0)T(0.0)S(0.0)GS(0.99)PRPAGAKPK K:TMT10,s:Phosphorylated S SAP130 114136.2 7 3 1227.1 164.39 HUMAN 1 3.4059 41.4256 SMSDPGVSYRTREEI-p P08559-4;S338-p SMSDPGVSYRTREEI 0.189011352569334 0.0238250163038362 0.251333333333333 0.465 14.1659474575803 22.1257349018334 0.251333333333333 0.465 0.0383182136200813 0.00612952061219009 2.72343789640031 4.34611125789836 P08559 PDHA1 P08559.4.S338.p_PDHA1 P08559-4_S338s _1_1_338_338 P08559-4 P08559-4|P08559-2|P29803|P08559-3|Q5JPU3 Isoform 4 of Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6199.6199.2 17.91 11.2 1.182 5 1 1 0 951.4118 1821.854 S338s TMT10 327 (R) YHGHSMSDPGVsYR (T) Y(0.0)HGHS(0.0)MS(0.0)DPGVS(0.99)Y(0.0)R s:Phosphorylated S PDHA1 48320.5 3 4 1899.1 108.34 HUMAN 1 14.1659 22.1257 SMSEDSDSGDDFFIG-p Q8NEF9;S281-p SMSEDSDSGDDFFIG 0.554522632403375 0.0105407926544461 -0.102666666666667 0.526 4.72815347197363 27.725764879602 -0.102666666666667 0.526 0.336654677378713 0.00168819850771917 -1.05399679073979 5.76070382011606 Q8NEF9 SRFBP1 Q8NEF9.S281.p_SRFBP1 Q8NEF9_S281s _1_1_281_281 Q8NEF9 Q8NEF9 Serum response factor-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22858.22858.3 13.67 13.67 2.176 5 1 1 0 830.6965 2410.1121 S281s TMT10 272 (K) QSSMSEDSDsGDDFFIGK (V) QS(0.0)S(0.0)MS(0.0)EDS(0.0)DS(0.99)GDDFFIGK K:TMT10,s:Phosphorylated S SRFBP1 48747.1 1 4 1171.1 170.26 HUMAN 1 -4.7282 27.7258 SMSEFLESEDGEVEQ-p Q15022;S546-p SMSEFLESEDGEVEQ 0.194510235340957 0.269665305927878 0.217333333333333 -0.114 13.8735375900193 7.49442618223801 0.217333333333333 -0.114 0.0409870103098622 0.17805631527518 2.669729023652 -1.54685397241523 Q15022 SUZ12 Q15022.S546.p_SUZ12 Q15022_S546s _1_1_546_546 Q15022 Q15022|J3QQW9 Polycomb protein SUZ12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20615.20615.2 21.76 21.76 7.3 3 1 1 0 1190.5144 2300.055 S546s TMT10 538 (K) ASMSEFLEsEDGEVEQQR (T) AS(0.0)MS(0.0)EFLES(0.99)EDGEVEQQR s:Phosphorylated S SUZ12 83795 7 3 1074.1 180.59 HUMAN 1 13.8735 -7.4944 SMSNGHGSPGEKAGS-p Q15742;S147-p SMSNGHGSPGEKAGS 0.091379469142163 0.0312461944784181 0.423 -0.33 22.1123126467127 20.3358058223299 0.423 -0.33 0.0061484937417975 0.00925591628021891 4.34765969016085 -3.94761803334315 Q15742 NAB2 Q15742.S147.p_NAB2 Q15742_S147s _1_1_147_147 Q15742 Q15742|Q15742-3|Q15742-2 NGFI-A-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4364.4364.3 12.34 12.34 7.764 3 1 1 0 594.9464 1702.8583 S147s TMT10 139 (K) GSMSNGHGsPGEK (A) GS(0.0)MS(0.0)NGHGS(0.99)PGEK K:TMT10,s:Phosphorylated S NAB2 56878.4 6 2 983.1 192.11 HUMAN 1 22.1123 -20.3358 SMTGAGKSPPSVQSL-p A2ABF9;S197-p SMTGAGKSPPSVQSL 0.58729668703518 0.0577995192793928 -0.075 -0.226333333333333 4.25484603572365 16.4939555866843 -0.075 -0.226333333333333 0.375418263408556 0.0224183910975879 -0.965540853353361 -3.16129914786586 A2ABF9 EHMT2 A2ABF9.S197.p_EHMT2 A2ABF9_S197s _1_1_197_197 A2ABF9 A2ABF9|A0A0G2JK64|A2ABF8|A0A0G2JIR1|Q96KQ7|Q96KQ7-2|A0A0G2JIS2|Q96KQ7-3 Histone-lysine N-methyltransferase EHMT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19621.19823.3 16.12 9.99 2.271 5 1 1 0 825.4181 2394.2708 S197s TMT10 189 (K) MSMTGAGKsPPSVQSLAMR (L) MS(0.0)MT(0.0)GAGKS(0.99)PPS(0.0)VQS(0.0)LAMR K:TMT10,s:Phosphorylated S EHMT2 141220.9 11 6 719.1 237.26 HUMAN 1 -4.2548 -16.494 SMTKILDSFAAAPVP-p P18583-5;S244-p SMTKILDSFAAAPVP 0.93306667659969 0.0229553714843276 0.022 -0.319 0.591377927427344 22.3752210311868 0.022 -0.319 0.872694436390189 0.00578732533405705 0.167985912371883 -4.40350495977972 P18583 SON P18583.5.S244.p_SON P18583-5_S244s _1_1_244_244 P18583-5 P18583-9|P18583-5|P18583-7 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35628.35628.3 17.86 17.86 8.398 4 1 1 0 799.126 2315.399 S244s TMT10 241 (K) ILDsFAAAPVPTTTLVLK (S) ILDS(0.99)FAAAPVPT(0.0)T(0.0)T(0.0)LVLK K:TMT10,s:Phosphorylated S SON 267429.6 1 8 45.1 778.56 HUMAN 1 0.5914 -22.3752 SMVINSDTDDEEEVS-p Q14676;T404-p SMVINSDTDDEEEVS 0.746527005315183 0.0810327570440762 0.0486666666666667 0.199333333333333 2.41010748762535 14.4722013359417 0.0486666666666667 0.199333333333333 0.574102253034955 0.035709179089422 0.597822756830049 2.77830046492364 Q14676 MDC1 Q14676.T404.p_MDC1 Q14676_T404t _1_1_404_404 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31334.31334.3 22.63 22.63 2.291 6 1 1 0 1138.224 3332.6932 T404t TMT10 394 (K) SQASMVINSDtDDEEEVSAALTLAHLK (E) S(0.0)QAS(0.0)MVINS(0.0)DT(0.99)DDEEEVS(0.0)AALT(0.0)LAHLK K:TMT10,t:Phosphorylated T MDC1 227803.2 25 12 6.1 1662.62 HUMAN 1 2.4101 14.4722 SMVSPVPSPTGTISV-p P85037;S243-p SMVSPVPSPTGTISV 0.678718870744885 0.147144465082663 -0.066 -0.151 3.15040442089583 10.9566685643956 -0.066 -0.151 0.484127282897542 0.0802293259658268 -0.750799026178625 -2.14755594683607 P85037 FOXK1 P85037.S243.p_FOXK1 P85037_S239sS243s_2_2_239_243 P85037 P85037|P85037-2 Forkhead box protein K1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21906.21906.2 16.24 16.24 1.316 8 2 2 0 1407.6461 2654.3479 S239s S243s TMT10 236 (R) SMVsPVPsPTGTISVPNSCPASPR (G) S(0.0)MVS(0.99)PVPS(0.99)PT(0.0)GT(0.0)IS(0.0)VPNS(0.0)CPAS(0.0)PR C:Carbamidomethylation,s:Phosphorylated S FOXK1 75912.4 14 15 686.1 243.66 HUMAN 1 -3.1504 -10.9567 SMYLQQATPPKNYQP-p Q96KQ4;T588-p SMYLQQATPPKNYQP 0.183885261808134 0.0093305335540636 -0.237666666666667 -0.531333333333333 14.4646137768496 28.6601730665309 -0.237666666666667 -0.531333333333333 0.0357716211282052 0.00136139042991997 -2.77862907516373 -6.02561768880695 Q96KQ4 PPP1R13B Q96KQ4.T588.p_PPP1R13B Q96KQ4_T588t _1_1_588_588 Q96KQ4 Q96KQ4 Apoptosis-stimulating of p53 protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21490.21490.4 15.24 15.24 1.222 8 1 1 0 823.9363 3212.7592 T588t TMT10 569 (R) KGPQTVNSSSIYSMYLQQAtPPK (N) KGPQT(0.0)VNS(0.0)S(0.0)S(0.0)IY(0.0)S(0.0)MY(0.0)LQQAT(0.99)PPK K:TMT10,t:Phosphorylated T PPP1R13B 120133.8 2 7 1161.1 171.12 HUMAN 1 -14.4646 -28.6602 SNALLRNSGSQEEDG-p A0A0C4DGZ1;S163-p SNALLRNSGSQEEDG 0.194002306690035 0.0232121000687203 0.306333333333333 0.370333333333333 13.8883250475612 22.308320578693 0.306333333333333 0.370333333333333 0.0408476894079384 0.00587716579208849 2.67243759931643 4.38806839576008 A0A0C4DGZ1 NotFound A0A0C4DGZ1.S163.p_NotFound A0A0C4DGZ1_S163s _1_1_163_163 A0A0C4DGZ1 A0A0C4DGZ1|Q8N5P1 Zinc finger CCCH domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10014.10014.4 13.93 10.48 1.196 3 1 1 0 689.3655 2674.4727 S163s TMT10 155 (K) GSNALLRNsGSQEEDGKPK (E) GS(0.0)NALLRNS(0.99)GS(0.0)QEEDGKPK K:TMT10,s:Phosphorylated S ZC3H8 34999.7 3 6 1997.1 103.4 HUMAN 1 13.8883 22.3083 SNALWDESDDSNSEI-p Q2M2Z5;S647-p SNALWDESDDSNSEI 0.291613067200657 0.272625045870108 0.179333333333333 0.129666666666667 10.0953417280559 7.43445175640999 0.179333333333333 0.129666666666667 0.0978285974548585 0.180532262261649 1.9982795576268 1.5364163869943 Q2M2Z5 KIZ Q2M2Z5.S647.p_KIZ Q2M2Z5_S647sS650s_2_2_647_650 Q2M2Z5 Q2M2Z5|A0A087X251|Q2M2Z5-2|Q2M2Z5-5 Centrosomal protein kizuna HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25467.25467.3 14.18 14.18 1.33 4 2 2 0 955.4177 2704.3012 S647s S650s TMT10 640 (K) SNALWDEsDDsNSEIEAALRPR (N) S(0.0)NALWDES(0.99)DDS(0.99)NS(0.0)EIEAALRPR s:Phosphorylated S KIZ 75794.3 1 7 2276.1 90.11 HUMAN 1 10.0953 7.4345 SNASKDETAQRCIHF-p Q9NWW7;T241-p SNASKDETAQRCIHF 0.771408500809374 0.543408214995881 0.121 -0.332666666666667 2.1616791495679 3.56087433561461 0.121 -0.332666666666667 0.607899918337364 0.440466178512413 0.544316632510045 -0.83207109550342 Q9NWW7 C2orf42 Q9NWW7.T241.p_C2orf42 Q9NWW7_S225sT241t_2_2_225_241 Q9NWW7 Q9NWW7 Uncharacterized protein C2orf42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18791.19005.4 8.47 2.81 1.785 6 2 2 0 895.4269 3417.7611 S225s N235n T241t Hydrogen 222 (R) FFCsCQTLKSHKSnASKDEtAQR (C) FFCS(0.99)CQT(0.0)LKS(0.0)HKS(0.0)N(1.0)AS(0.0)KDET(0.99)AQR C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated,t:Phosphorylated T C2orf42 65159.4 1 1 6962.1 8.47 HUMAN 1 2.1617 -3.5609 SNDDLDVSESKGCME-p Q96EB6;S569-p SNDDLDVSESKGCME 0.0635370415880919 0.0160204973261027 -0.427666666666667 -0.520333333333333 25.87333491074 24.796159404667 -0.425249660288164 -0.520333333333333 0.00258622621114384 0.00331424080103444 -5.26842093015698 -4.98617745451766 Q96EB6 SIRT1 Q96EB6.S569.p_SIRT1 Q96EB6_S569s _1_1_569_569 Q96EB6 Q96EB6|E9PC49|B0QZ35 NAD-dependent protein deacetylase sirtuin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12094.12094.3 9.68 9.68 2.414 3 1 1 0 582.9448 1666.8536 S569s TMT10 562 (K) SNDDLDVsESK (G) S(0.0)NDDLDVS(0.99)ES(0.0)K K:TMT10,s:Phosphorylated S SIRT1 82763.6 1 6 475.1 301.26 HUMAN 1 -25.8733 -24.7962 SNDESEGSGSEKSSA-p Q96T23;S865-p SNDESEGSGSEKSSA 0.378389324662461 0.00756903109707508 -0.118333333333333 -0.679 7.80202986938402 30.3042937948442 -0.118333333333333 -0.679 0.165881140656204 0.00093233206429651 -1.60079823808635 -6.51477804438692 Q96T23 RSF1 Q96T23.S865.p_RSF1 Q96T23_S865s _1_1_865_865 Q96T23 Q96T23 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11904.11904.3 15.77 12.25 2.264 6 1 1 0 853.0728 2477.2399 S865s TMT10 854 (R) WKYSSNDESEGsGSEK (S) WKY(0.0)S(0.0)S(0.0)NDES(0.0)EGS(0.99)GS(0.0)EK K:TMT10,s:Phosphorylated S RSF1 165358.1 1 13 39.1 857.38 HUMAN 1 -7.802 -30.3043 SNDSDRYSDNEEDSK-p P42167;S184-p SNDSDRYSDNEEDSK 0.738151511468251 0.0602666189041986 0.0533333333333333 0.216666666666667 2.50098394841901 16.2522706167344 0.0533333333333333 0.216666666666667 0.562213934167562 0.023701342071858 0.617097046820728 3.11453609457519 P42167 TMPO P42167.S184.p_TMPO P42167_S184s _1_1_184_184 P42167 P42167|G5E972|P42167-2|P42167-3 Lamina-associated polypeptide 2, isoforms beta/gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12818.12818.5 22.83 22.83 1.705 5 1 1 0 662.92 3230.6016 S184s TMT10 174 (R) QNGSNDSDRYsDNEEDSKIELK (L) QNGS(0.0)NDS(0.0)DRY(0.0)S(0.99)DNEEDS(0.0)KIELK K:TMT10,s:Phosphorylated S TMPO 50726.4 102 33 123.2 546.19 HUMAN 1 2.501 16.2523 SNDSDRYSDNEEGKK-p P42166;S184-p SNDSDRYSDNEEGKK 0.367103810267829 0.113545843627483 0.151666666666667 -0.284666666666667 8.07996765101972 12.4605761119665 0.151666666666667 -0.284666666666667 0.155597722145737 0.0567469322952451 1.64903008289302 -2.41304582536692 P42166 TMPO P42166.S184.p_TMPO P42166_S184s_1_1_184_184 P42166 P42166 Lamina-associated polypeptide 2, isoform alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12325.12823.4 21.64 17.41 0 12 1 1 0 1021.4665 4001.8961 N175n S184s TMT10 158 (R) SSTPLPTISSSAENTRQnGSNDSDRYsDNEEGK (K) S(0.0)S(0.0)T(0.0)PLPT(0.0)IS(0.0)S(0.0)S(0.0)AEN(0.50)T(0.0)RQN(0.50)GS(0.0)N(0.0)DS(0.0)DRY(0.0)S(0.99)DN(0.0)EEGK K:TMT10,n:Deamidated,s:Phosphorylated S TMPO 76061.2 56 10 123.1 546.19 HUMAN 1 8.08 -12.4606 SNEKLTISNGPKNHS-p Q14694;S556-p SNEKLTISNGPKNHS 0.306023660774545 0.299912424436301 -0.213666666666667 -0.132666666666667 9.63882270755252 6.90436033654898 -0.213666666666667 -0.132666666666667 0.108672017353943 0.203968905911109 -1.91902411471505 -1.44386793545889 Q14694 USP10 Q14694.S556.p_USP10 Q14694_S556s _1_1_556_556 Q14694 Q14694-2|Q14694-3 Ubiquitin carboxyl-terminal hydrolase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15690.15690.2 9.9 4.8 1.237 2 1 1 0 684.3898 1287.8037 S556s TMT10 553 (K) LTIsNGPK (N) LT(0.0)IS(0.99)NGPK K:TMT10,s:Phosphorylated S USP10 87759.8 1 13 358.1 346.34 HUMAN 1 -9.6388 -6.9044 SNEVFQESEEEKQPE-p Q9BZQ8;S622-p SNEVFQESEEEKQPE 0.404766243702161 0.547185190146381 -0.121666666666667 -0.0583333333333333 7.25314716318121 3.5216604928657 -0.121666666666667 -0.0583333333333333 0.188228457672802 0.444461298484209 -1.50525657545232 -0.824386311324904 Q9BZQ8 FAM129A Q9BZQ8.S622.p_FAM129A Q9BZQ8_S622s _1_1_622_622 Q9BZQ8 Q9BZQ8 Protein Niban HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27875.27875.5 29.3 26.94 5.651 7 1 1 0 945.502 4643.5023 S622s TMT10 600 (R) RASAILPGVLGSETLSNEVFQEsEEEKQPEVPSSLAK (G) RAS(0.0)AILPGVLGS(0.0)ET(0.0)LS(0.0)NEVFQES(0.99)EEEKQPEVPS(0.0)S(0.0)LAK K:TMT10,s:Phosphorylated S FAM129A 104102.7 11 3 641.1 254.96 HUMAN 1 -7.2531 -3.5217 SNGAEGLTPRSGTTP-p Q99459;T424-p SNGAEGLTPRSGTTP 0.282315789529105 0.322706764666212 0.179333333333333 -0.137333333333333 10.3857304317257 6.49398767593548 0.179333333333333 -0.137333333333333 0.0915012352131407 0.224182254526732 2.04881200924343 -1.37176208165988 Q99459 CDC5L Q99459.T424.p_CDC5L Q99459_T424t _1_1_424_424 Q99459 Q99459 Cell division cycle 5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8380.8380.3 12.83 12.83 8.52 3 1 1 0 503.5821 1428.7644 T424t TMT10 415 (R) TPSNGAEGLtPR (S) T(0.0)PS(0.0)NGAEGLT(0.99)PR t:Phosphorylated T CDC5L 92477.2 5 12 751.1 232.35 HUMAN 1 10.3857 -6.494 SNGELSESPGAGKGA-p Q12830;S763-p SNGELSESPGAGKGA 0.492434952554336 0.73575025977309 -0.147 -0.054 5.66566282471174 1.83683209524495 -0.147 -0.054 0.27128995750255 0.655113864132756 -1.22476698566124 -0.472303032366638 Q12830 BPTF Q12830.S763.p_BPTF Q12830_S763s _1_1_763_763 Q12830 Q12830|Q12830-2|Q12830-4|A0A0A0MR81 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8871.8871.2 16.87 9.95 2.214 3 1 1 0 885.9373 1690.9012 S763s TMT10 756 (K) SNGELSEsPGAGK (G) S(0.0)NGELS(0.0)ES(0.99)PGAGK K:TMT10,s:Phosphorylated S BPTF 340995.1 5 7 94.1 610.41 HUMAN 1 -5.6657 -1.8368 SNGLPPASPLGQSDK-p Q92585;S159-p SNGLPPASPLGQSDK 0.878395260815069 0.116907202644623 -0.0253333333333333 0.196666666666667 1.10661654554634 12.2935597734661 -0.0253333333333334 0.196666666666667 0.775065392209701 0.0589717509365963 -0.300412322914802 2.38329119639885 Q92585 MAML1 Q92585.S159.p_MAML1 Q92585_S159s _1_1_159_159 Q92585 Q92585 Mastermind-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24840.25043.5 20.09 20.09 2.533 7 1 1 0 835.0428 4091.2228 S159s TMT10 143 (R) EAPLGVAISSNGLPPAsPLGQSDKPSGADALQSSGK (H) EAPLGVAIS(0.0)S(0.0)NGLPPAS(0.99)PLGQS(0.0)DKPS(0.0)GADALQS(0.0)S(0.0)GK K:TMT10,s:Phosphorylated S MAML1 108508.8 4 3 1563.1 131.35 HUMAN 1 -1.1066 12.2936 SNGPKNHSVNEEEQE-p Q14694;S563-p SNGPKNHSVNEEEQE 0.507195047903141 0.0773808127257072 -0.128 0.234 5.43805364348318 14.7456961505252 -0.128 0.234 0.285887150288909 0.033529755376142 -1.18376249738039 2.82908312916022 Q14694 USP10 Q14694.S563.p_USP10 Q14694_S563sS576s_2_2_563_576 Q14694 Q14694-2|Q14694-3 Ubiquitin carboxyl-terminal hydrolase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13257.13257.3 21.48 21.48 99 2 2 2 0 1139.4487 3256.41 S563s S576s TMT10 561 (K) NHsVNEEEQEEQGEGsEDEWEQVGPR (N) NHS(1.0)VNEEEQEEQGEGS(1.0)EDEWEQVGPR s:Phosphorylated S USP10 87759.8 2 19 358.1 346.34 HUMAN 1 -5.4381 14.7457 SNGPVKKSMREKAVE-p Q16585;S21-p SNGPVKKSMREKAVE 0.215386959262723 0.144788199463998 0.202333333333333 -0.164 12.8452581373309 11.0548978387896 0.202333333333333 -0.164 0.051936680230091 0.0784350569326177 2.48322030122097 -2.16474820104866 Q16585 SGCB Q16585.S21.p_SGCB Q16585_S13sS14sS21s_3_3_13_21 Q16585 Q16585 Beta-sarcoglycan HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26707.26707.4 11.69 11.89 99 3 3 3 0 847.4031 3130.7246 S13s S14s S21s M22m Acetyl 2 (M) AAAAAAAAEQQssNGPVKKsmREK (A) AAAAAAAAEQQS(1.0)S(1.0)NGPVKKS(1.0)M(1.0)REK K:TMT10,s:Phosphorylated S,m:Oxidized methionine SGCB 35118.5 3 2 5779.1 16.36 HUMAN 1 12.8453 -11.0549 SNGSGNGSDSEMDTS-p Q9NRY4;S1134-p SNGSGNGSDSEMDTS 0.903935218257586 0.0297329085588789 0.0193333333333333 0.284333333333333 0.863156614750031 20.6607625779138 0.0193333333333333 0.284333333333333 0.819755498781035 0.00858862700516786 0.239191455825301 4.01829442034367 Q9NRY4 ARHGAP35 Q9NRY4.S1134.p_ARHGAP35 Q9NRY4_S1134s_1_1_1134_1134 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9605.9605.2 21.13 21.13 1.579 7 1 1 0 1220.4886 2358.0313 N1128n N1132n S1134s TMT10 1125 (K) AQSnGSGnGsDSEMDTSSLER (G) AQS(0.0)N(1.0)GS(0.0)GN(1.0)GS(0.99)DS(0.0)EMDT(0.0)S(0.0)S(0.0)LER n:Deamidated,s:Phosphorylated S ARHGAP35 172051.4 15 9 247.1 410.47 HUMAN 1 0.8632 20.6608 SNGSKTDTEEEEEQQ-p Q9UGU0;T1764-p SNGSKTDTEEEEEQQ 0.443926771270007 0.0943689521238227 0.106 0.190333333333333 6.49940127889799 13.559137078415 0.106 0.190333333333333 0.223902979134644 0.0440642408268879 1.3730688990197 2.61081870993468 Q9UGU0 TCF20 Q9UGU0.T1764.p_TCF20 Q9UGU0_T1764t _1_1_1764_1764 Q9UGU0 Q9UGU0|Q9UGU0-2|A9JX13 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5529.5529.3 15.6 13.77 2 5 1 1 0 1050.1681 3068.5223 T1764t TMT10 1755 (K) SASNGSKTDtEEEEEQQQQQK (E) S(0.0)AS(0.0)NGS(0.0)KT(0.0)DT(0.99)EEEEEQQQQQK K:TMT10,t:Phosphorylated T TCF20 213250.7 2 26 197.1 457.96 HUMAN 1 6.4994 13.5591 SNGWETASAVDMMEL-p Q9UIC8;S277-p SNGWETASAVDMMEL 0.455145758341492 0.884348541848555 -0.133333333333333 -0.0273333333333333 6.30541062192452 0.750740049638659 -0.133333333333333 -0.0273333333333333 0.234131009572555 0.841251777834045 -1.33879286448868 -0.210109786481972 Q9UIC8 LCMT1 Q9UIC8.S277.p_LCMT1 Q9UIC8_S277s _1_1_277_277 Q9UIC8 Q9UIC8-2|Q9UIC8-3 Leucine carboxyl methyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.32639.32639.3 14.38 14.38 1.132 4 1 1 0 870.4044 2529.2315 S277s TMT10 268 (R) LLSNGWETAsAVDMMELYNR (L) LLS(0.0)NGWET(0.0)AS(0.99)AVDMMELY(0.0)NR s:Phosphorylated S LCMT1 39177.2 1 2 5038.1 23.64 HUMAN 1 -6.3054 -0.7507 SNHKLVFSNVNLKEV-p Q16531;S669-p SNHKLVFSNVNLKEV 0.455652494519437 0.450360468103117 -0.113666666666667 0.0753333333333333 6.2957586242408 4.61791510594388 -0.113666666666667 0.0753333333333333 0.234651933762174 0.345309470403755 -1.33708420494541 1.03335381514052 Q16531 DDB1 Q16531.S669.p_DDB1 Q16531_S669s _1_1_669_669 Q16531 Q16531|F5GY55 DNA damage-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26620.26620.2 8.28 3.42 99 1 1 1 0 786.4536 1491.9299 S669s TMT10 666 (K) LVFsNVNLK (E) LVFS(1.0)NVNLK K:TMT10,s:Phosphorylated S DDB1 128220.8 2 3 2321.1 87.89 HUMAN 1 -6.2958 4.6179 SNHLNHVSPGQLTKK-p Q8N7R7;S112-p SNHLNHVSPGQLTKK 0.790931383472512 0.724469495274812 -0.041 0.0416666666666667 1.96643984932567 1.92703154898846 -0.041 0.0416666666666667 0.635851961080598 0.641648000267949 -0.501357011079491 0.492524897436895 Q8N7R7 CCNYL1 Q8N7R7.S112.p_CCNYL1 Q8N7R7_S112s _1_1_112_112 Q8N7R7 Q8N7R7|Q8N7R7-3 Cyclin-Y-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9980.9980.3 14.29 14.29 6.845 3 1 1 0 690.7018 1990.1234 S112s TMT10 105 (K) SNHLNHVsPGQLTK (K) S(0.0)NHLNHVS(0.99)PGQLT(0.0)K K:TMT10,s:Phosphorylated S CCNYL1 41274.9 2 2 1234.2 163.69 HUMAN 1 -1.9664 1.927 SNISGASSDISLDEQ-p P22059;S386-p SNISGASSDISLDEQ 0.17368064594083 0.0157813938405238 0.335666666666667 -0.511166666666667 15.1487284827559 24.9044872982727 0.335666666666667 -0.511166666666667 0.0305581565683115 0.00323259480140905 2.90639215020906 -5.01340073278144 P22059 OSBP P22059.S386.p_OSBP P22059_S386sS389s_2_2_386_389 P22059 P22059 Oxysterol-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19132.19132.2 15.99 15.99 1.145 7 2 2 0 1295.5922 2430.24 S386s S389s TMT10 377 (R) TGSNISGASsDIsLDEQYK (H) T(0.0)GS(0.0)NIS(0.0)GAS(0.0)S(0.99)DIS(0.99)LDEQY(0.0)K K:TMT10,s:Phosphorylated S OSBP 90274.8 6 15 468.1 302.79 HUMAN 2 15.1487 -24.9045 SNKFQNSSVEDDDDV-p Q9UBW7;S53-p SNKFQNSSVEDDDDV 0.0703738782399641 0.725498552427761 0.435333333333333 0.0406666666666667 24.868832657314 1.91801109049259 0.435333333333333 0.0406666666666667 0.00325924294611685 0.642982112135403 5.01063264771261 0.490511364462781 Q9UBW7 ZMYM2 Q9UBW7.S53.p_ZMYM2 Q9UBW7_S53s _1_1_53_53 Q9UBW7 Q9UBW7|Q9UBW7-2 Zinc finger MYM-type protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31471.31471.4 18.51 18.51 1.123 3 1 1 0 958.4639 3750.87 S53s TMT10 49 (K) FQNSsVEDDDDVVFIEPVQPPPPSVPVVADQR (T) FQNS(0.0)S(0.99)VEDDDDVVFIEPVQPPPPS(0.0)VPVVADQR s:Phosphorylated S ZMYM2 158502.5 4 2 750.1 232.41 HUMAN 1 24.8688 1.918 SNKGRWESQQDVSQT-p Q9NQT8;S1410-p SNKGRWESQQDVSQT 0.0975054875421888 0.420017747535652 0.338 0.0876666666666667 21.4134085483226 5.01544597108799 0.338 0.0876666666666667 0.00722202762254894 0.315105078647684 4.18906430267203 1.10666365949889 Q9NQT8 KIF13B Q9NQT8.S1410.p_KIF13B Q9NQT8_S1410s _1_1_1410_1410 Q9NQT8 Q9NQT8 Kinesin-like protein KIF13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8053.8053.2 11.49 6.98 9.81 5 1 1 0 1087.0159 2093.0573 S1410s TMT10 1406 (K) GRWEsQQDVSQTTVSR (G) GRWES(0.99)QQDVS(0.0)QT(0.0)T(0.0)VS(0.0)R s:Phosphorylated S KIF13B 204097.3 4 9 335.1 355.82 HUMAN 1 21.4134 5.0154 SNKKRKLTPDHNKNT-p Q8NDD1;T142-p SNKKRKLTPDHNKNT 0.174431385631127 0.00227084207720462 -0.221333333333333 -0.730333333333333 15.1036779904585 40.8831425538538 -0.221333333333333 -0.730333333333333 0.0308767940443913 8.15991706274276e-05 -2.89791878007161 -10.5358102611604 Q8NDD1 C1orf131 Q8NDD1.T142.p_C1orf131 Q8NDD1_T142t _1_1_142_142 Q8NDD1 Q8NDD1|Q8NDD1-2|Q8NDD1-3|Q5TBH9|Q8NDD1-4 Uncharacterized protein C1orf131 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4158.4158.3 14.08 14.08 99 1 1 1 0 497.6093 1410.8469 T142t Hydrogen 140 (R) KLtPDHNK (N) KLT(1.0)PDHNK K:TMT10-Lys-Only,t:Phosphorylated T C1orf131 32822.9 3 3 1643.1 124.3 HUMAN 1 -15.1037 -40.8831 SNKKWDGSEEDEDNS-p O60841;S164-p SNKKWDGSEEDEDNS 0.356757958170201 0.0787838886592226 0.21 -0.257333333333333 8.32342591173052 14.6497424710999 0.21 -0.257333333333333 0.147115153356636 0.034278811266893 1.69122500500211 -2.81123242879915 O60841 EIF5B O60841.S164.p_EIF5B O60841_S164s _1_1_164_164 O60841 O60841|A0A087WUT6 Eukaryotic translation initiation factor 5B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9952.10457.2 16.6 16.6 7.601 2 1 1 0 1153.5433 2226.1129 S164s TMT10 160 (K) KWDGsEEDEDNSK (K) KWDGS(0.99)EEDEDNS(0.0)K K:TMT10,s:Phosphorylated S EIF5B 139280.8 41 7 113.1 571.22 HUMAN 1 8.3234 -14.6497 SNKRRRFSGTAVYEN-p Q6AHZ1;S655-p SNKRRRFSGTAVYEN 0.957810192524261 0.352590738318364 -0.012 -0.108666666666667 0.363747421842397 6.0013864678845 -0.012 -0.108666666666667 0.919655680686765 0.251108464973247 -0.105663694542061 -1.28450493251542 Q6AHZ1 ZNF518A Q6AHZ1.S655.p_ZNF518A Q6AHZ1_S655s _1_1_655_655 Q6AHZ1 Q6AHZ1|Q6AHZ1-2 Zinc finger protein 518A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9718.9718.3 13.85 13.85 1.145 3 1 1 0 611.9637 1753.9183 S655s TMT10 653 (R) RFsGTAVYENPQR (E) RFS(0.99)GT(0.0)AVY(0.0)ENPQR s:Phosphorylated S ZNF518A 169174.9 3 2 5178.1 22.14 HUMAN 1 -0.3637 -6.0014 SNKVARTSPINLGLN-p P50616;S205-p SNKVARTSPINLGLN 0.266142547410633 0.138848625682961 0.172666666666667 0.192 10.8971695423938 11.2962908820126 0.172666666666667 0.192 0.0813360440511677 0.0741943632181622 2.13810386262969 2.20707453846135 P50616 TOB1 P50616.S205.p_TOB1 P50616_S205s _1_1_205_205 P50616 P50616 Protein Tob1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33809.33809.2 15.76 15.76 1.157 2 1 1 0 1075.1005 2069.2371 S205s TMT10 204 (R) TsPINLGLNVNDLLK (Q) T(0.0)S(0.99)PINLGLNVNDLLK K:TMT10,s:Phosphorylated S TOB1 38268.4 18 1 2607.1 76.83 HUMAN 1 10.8972 11.2963 SNLCRGKSPPPEFAK-p P52294;S244-p SNLCRGKSPPPEFAK 0.929264170031949 0.0701717006908627 0.0136666666666667 0.218666666666667 0.632371962828609 15.342697953545 0.0136666666666667 0.218666666666667 0.864495632881337 0.0292233638026328 0.178937755998398 2.94100184573448 P52294 KPNA1 P52294.S244.p_KPNA1 P52294_S244s _1_1_244_244 P52294 P52294 Importin subunit alpha-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13256.13256.3 12.07 6.13 99 1 1 1 0 609.0089 1745.0565 S244s TMT10 242 (R) GKsPPPEFAK (V) GKS(1.0)PPPEFAK K:TMT10,s:Phosphorylated S KPNA1 60962.4 2 3 4687.1 27.93 HUMAN 1 0.6324 15.3427 SNLDAKYSPAPGGPP-p K7EKI0;S361-p SNLDAKYSPAPGGPP 0.497175098488218 0.899801252921161 0.106333333333333 0.015 5.58864348900239 0.64151091272817 0.106333333333333 0.015 0.276144025242207 0.862678369307099 1.21092033697118 0.181351482638476 K7EKI0 EVPL K7EKI0.S361.p_EVPL K7EKI0_S361s _1_1_361_361 K7EKI0 K7EKI0|Q92817 Envoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30958.30958.4 18.61 18.61 2.446 4 1 1 0 1026.2896 4022.1689 S361s TMT10 352 (K) LNSNLDAKYsPAPGGPPGAPTELLQQLEAEEK (R) LNS(0.0)NLDAKY(0.0)S(0.99)PAPGGPPGAPT(0.0)ELLQQLEAEEK K:TMT10,s:Phosphorylated S EVPL 235195.7 3 3 1436.1 142.57 HUMAN 1 5.5886 0.6415 SNLDTCGSISQVIEQ-p Q12888-2;S108-p SNLDTCGSISQVIEQ 0.374297731091176 0.442070699751668 0.134333333333333 0.0893333333333334 7.90195770178378 4.7193936611273 0.134333333333333 0.0893333333333334 0.16210791866183 0.337334402207607 1.61814817388068 1.052172562472 Q12888 TP53BP1 Q12888.2.S108.p_TP53BP1 Q12888-2_S108s _1_1_108_108 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28974.28974.3 22.81 21.05 1.764 5 1 1 0 1116.8701 3268.6317 S108s TMT10 94 (K) VADPVDSSNLDTCGsISQVIEQLPQPNR (T) VADPVDS(0.0)S(0.0)NLDT(0.0)CGS(0.99)IS(0.0)QVIEQLPQPNR C:Carbamidomethylation,s:Phosphorylated S TP53BP1 216167.2 10 4 3.1 2297.07 HUMAN 1 7.902 4.7194 SNLGHPESPPRKRLK-p A0A0A0MTL5;S75-p SNLGHPESPPRKRLK 0.343568239873255 0.0549479045140509 -0.272666666666667 -0.490333333333333 8.61658097879621 16.7893650351843 -0.272666666666667 -0.490333333333333 0.137512412745783 0.0209441865014854 -1.74199130727826 -3.21884794006422 A0A0A0MTL5 NotFound A0A0A0MTL5.S75.p_NotFound A0A0A0MTL5_S75s _1_1_75_75 A0A0A0MTL5 A0A0A0MTL5|Q13309|Q13309-2 S-phase kinase-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24850.24850.5 24.38 24.38 2.484 3 1 1 0 670.9377 3270.7007 S75s TMT10 55 (K) EEPDSENIPQELLSNLGHPEsPPRK (R) EEPDS(0.0)ENIPQELLS(0.0)NLGHPES(0.99)PPRK K:TMT10,s:Phosphorylated S SKP2 49683.1 5 1 2389.1 85.56 HUMAN 1 -8.6166 -16.7894 SNLKRTASNPKVENE-p Q9UBF8-2;S294-p SNLKRTASNPKVENE 0.177849910632019 0.184044918490489 -0.224 -0.211666666666667 14.860023365841 9.6650036049937 -0.224 -0.211666666666667 0.0326586075074525 0.108018872423795 -2.85223943391005 -1.92281590265904 Q9UBF8 PI4KB Q9UBF8.2.S294.p_PI4KB Q9UBF8-2_S294s _1_1_294_294 Q9UBF8-2 Q9UBF8-2 Isoform 2 of Phosphatidylinositol 4-kinase beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10300.10300.4 19.12 19.12 2.036 2 1 1 0 640.8187 2480.2942 S294s Hydrogen 292 (R) TAsNPKVENEDEPVRLAPER (E) T(0.0)AS(0.99)NPKVENEDEPVRLAPER K:TMT10-Lys-Only,s:Phosphorylated S PI4KB 90547.4 14 5 325.1 361.79 HUMAN 1 -14.86 -9.665 SNLQKSISNPPGSNL-p Q9H4A3-7;S2823-p SNLQKSISNPPGSNL 0.178323796166991 0.862895201571829 0.361333333333333 -0.0193333333333333 14.7907881958979 0.903999426248965 0.361333333333333 -0.0193333333333333 0.033183422788731 0.812082323535031 2.83930464665582 -0.249596975836102 Q9H4A3 WNK1 Q9H4A3.7.S2823.p_WNK1 Q9H4A3-7_S2823s _1_1_2823_2823 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2|F5GWT4|Q9H4A3-4 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10301.10497.2 12.34 6.89 2.506 3 1 1 0 725.8661 1370.7589 S2823s TMT10 2821 (K) SIsNPPGSNLR (T) S(0.0)IS(0.99)NPPGS(0.0)NLR s:Phosphorylated S WNK1 301202.7 3 25 162.1 495.27 HUMAN 1 14.7908 -0.904 SNLSEAGSIKKGERE-p P30622;S204-p SNLSEAGSIKKGERE 0.526362968041427 0.115747127817729 -0.0873333333333333 -0.243 5.15709384331748 12.3526311470624 -0.0873333333333334 -0.243 0.304993522385855 0.0581750660836838 -1.13276998092763 -2.39380631947999 P30622 CLIP1 P30622.S204.p_CLIP1 P30622_S200sS204s_2_2_200_204 P30622 P30622-2|J3KP58|F5H1T5|P30622-1 CAP-Gly domain-containing linker protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18886.18886.3 14.42 13.61 5.323 6 2 2 0 738.0226 2052.1225 S200s S204s TMT10 191 (K) TASESISNLsEAGsIK (K) T(0.0)AS(0.0)ES(0.0)IS(0.0)NLS(0.99)EAGS(0.99)IK K:TMT10,s:Phosphorylated S CLIP1 162985.2 12 18 372.1 339.16 HUMAN 1 -5.1571 -12.3526 SNMKRAASLNYLNQP-p Q9NSK0-3;S608-p SNMKRAASLNYLNQP 0.200797395490016 0.462663228122581 0.354666666666667 0.113333333333333 13.547339579428 4.46369448684385 0.354666666666667 0.113333333333333 0.0441841029422711 0.357791938641734 2.61017818668995 1.00460570284242 Q9NSK0 KLC4 Q9NSK0.3.S608.p_KLC4 Q9NSK0-3_S608s _1_1_608_608 Q9NSK0-3 Q9NSK0-3|Q9NSK0-5 Isoform 3 of Kinesin light chain 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17978.17978.4 22.07 22.07 5.556 4 1 1 0 617.0774 2385.32 S608s TMT10 605 (K) RAAsLNYLNQPSAAPLQVSR (G) RAAS(0.99)LNY(0.0)LNQPS(0.0)AAPLQVS(0.0)R s:Phosphorylated S KLC4 71007 11 5 1761.1 117.07 HUMAN 1 13.5473 4.4637 SNMMSKLSSEDEEED-p Q8NEJ9;S142-p SNMMSKLSSEDEEED 0.519883367174228 0.143220511057626 -0.0963333333333333 -0.166666666666667 5.24721762602696 11.120246163283 -0.0963333333333334 -0.164328049684223 0.298729586272841 0.0772636789881394 -1.14917515413504 -2.17619543440123 Q8NEJ9 NGDN Q8NEJ9.S142.p_NGDN Q8NEJ9_S142sS143s_2_2_142_143 Q8NEJ9 Q8NEJ9|Q8NEJ9-2 Neuroguidin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16127.16127.5 13.85 13.85 1.695 6 2 2 0 1004.2729 4857.4055 S142s S143s TMT10 130 (R) FKPHPSNMMSKLssEDEEEDEAEDDQSEASGKK (S) FKPHPS(0.0)NMMS(0.0)KLS(0.99)S(0.99)EDEEEDEAEDDQS(0.0)EAS(0.0)GKK K:TMT10,s:Phosphorylated S NGDN 35893.5 2 4 2339.1 87.27 HUMAN 1 -5.2472 -11.1202 SNMRMQFSFEEYEKA-p A0A1W2PR28;S393-p SNMRMQFSFEEYEKA 0.129739749890184 0.72197682317235 -0.27 -0.0546666666666667 18.3683591250079 1.94806894107225 -0.27 -0.0546666666666667 0.0145600909393237 0.638547348526308 -3.53720144677344 -0.497213391342577 A0A1W2PR28 NotFound A0A1W2PR28.S393.p_NotFound A0A1W2PR28_S393s _1_1_393_393 A0A1W2PR28 Q5JU85-2|A0A1W2PR28|Q5JU85-3 IQ motif and SEC7 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24592.24592.2 15.38 15.38 9.732 2 1 1 0 938.4332 1795.8977 S393s TMT10 390 (R) MQFsFEEYEK (A) MQFS(0.99)FEEY(0.0)EK K:TMT10,s:Phosphorylated S IQSEC2 128893.2 7 2 1275.1 159.32 HUMAN 1 -18.3684 -1.9481 SNMRMQFSFEGPEKV-p A0A087WWK8;S166-p SNMRMQFSFEGPEKV 0.121292901003909 0.0840621276807936 -0.306333333333333 -0.268666666666667 19.0566648338116 14.2371804042797 -0.306333333333333 -0.268666666666667 0.0124260620119684 0.0376948448025532 -3.67936129775048 -2.73489567375168 A0A087WWK8 IQSEC1 A0A087WWK8.S166.p_IQSEC1 A0A087WWK8_S166s _1_1_166_166 A0A087WWK8 A0A087WWK8|Q6DN90|Q6DN90-2|A0A0C4DGT3 IQ motif and SEC7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23394.23394.3 14.84 14.66 99 1 1 1 0 579.9489 1657.866 S166s TMT10 163 (R) MQFsFEGPEK (V) MQFS(1.0)FEGPEK K:TMT10,s:Phosphorylated S IQSEC1 125330.2 7 4 768.1 228.42 HUMAN 1 -19.0567 -14.2372 SNNEQDNSLLEQYLT-p Q8IW35-2;S796-p SNNEQDNSLLEQYLT 0.793626137607919 0.244625075964834 0.0383333333333333 -0.208666666666667 1.93730551580809 8.05843508190152 0.0383333333333334 -0.208666666666667 0.640131867984017 0.156371100204746 0.494872694773855 -1.64477070564015 Q8IW35 CEP97 Q8IW35.2.S796.p_CEP97 Q8IW35-2_S796s_1_1_796_796 Q8IW35-2 Q8IW35-2 Isoform 2 of Centrosomal protein of 97 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32329.32329.5 24.47 24.47 3.641 9 1 1 0 906.6106 4448.0447 N795n S796s TMT10 787 (K) ESSNNEQDnsLLEQYLTSVQQLEDADERTNFDTETR (D) ES(0.0)S(0.0)N(0.0)N(0.0)EQDN(0.99)S(0.99)LLEQY(0.0)LT(0.0)S(0.0)VQQLEDADERT(0.0)N(0.0)FDT(0.0)ET(0.0)R n:Deamidated,s:Phosphorylated S CEP97 100762.5 5 12 759.1 230.22 HUMAN 1 1.9373 -8.0584 SNNIAELSPGAINSC-p Q9Y2I9;S610-p SNNIAELSPGAINSC 0.391198751974399 0.00344325143052596 -0.133 -0.625333333333333 7.5198664063055 36.8162749444824 -0.133 -0.625333333333334 0.177016340962694 0.000208148126169228 -1.55174067028175 -8.787522027359 Q9Y2I9 TBC1D30 Q9Y2I9.S610.p_TBC1D30 Q9Y2I9_S610s _1_1_610_610 Q9Y2I9 Q9Y2I9|Q9Y2I9-2|F8VZ81|Q9Y2I9-3 TBC1 domain family member 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16487.16487.2 12.87 12.87 2.014 3 1 1 0 1006.4765 1931.9806 S610s TMT10 603 (R) SNNIAELsPGAINSCR (S) S(0.0)NNIAELS(0.99)PGAINS(0.0)CR C:Carbamidomethylation,s:Phosphorylated S TBC1D30 103654.4 2 10 283.1 386.67 HUMAN 1 -7.5199 -36.8163 SNNSRKSSADTEFSD-p Q9H6S0;S1202-p SNNSRKSSADTEFSD 0.0334086386812578 0.805737242276234 -0.643333333333333 -0.0303333333333333 34.3532720887307 1.31389787961116 -0.643333333333333 -0.0303333333333333 0.000367005684581061 0.738941762372191 -7.87403404505159 -0.350826993019531 Q9H6S0 YTHDC2 Q9H6S0.S1202.p_YTHDC2 Q9H6S0_S1202s _1_1_1202_1202 Q9H6S0 Q9H6S0 Probable ATP-dependent RNA helicase YTHDC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9385.9385.3 12.08 12.08 1.125 6 1 1 0 824.705 2392.1339 S1202s TMT10 1200 (R) KSsADTEFSDECTTAER (V) KS(0.0)S(0.99)ADT(0.0)EFS(0.0)DECT(0.0)T(0.0)AER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S YTHDC2 161671.9 1 7 668.1 249.65 HUMAN 1 -34.3533 -1.3139 SNPQKADSEPESPLN-p Q5T1V6;S156-p SNPQKADSEPESPLN 0.239193915947816 0.308072801409393 -0.192333333333333 0.135333333333333 11.8745927041835 6.75826996799077 -0.192333333333333 0.135333333333333 0.0649442535602321 0.210946829896606 -2.31011041218937 1.41825134875524 Q5T1V6 DDX59 Q5T1V6.S156.p_DDX59 Q5T1V6_S156s _1_1_156_156 Q5T1V6 Q5T1V6|Q5T1V6-2 Probable ATP-dependent RNA helicase DDX59 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21391.21391.4 19.1 19.1 2.239 6 1 1 0 801.9156 3124.677 S156s TMT10 148 (K) LSNPQKADsEPESPLNASYVYK (E) LS(0.0)NPQKADS(0.99)EPES(0.0)PLNAS(0.0)Y(0.0)VY(0.0)K K:TMT10,s:Phosphorylated S DDX59 69493.1 2 2 2478.1 81.77 HUMAN 1 -11.8746 6.7583 SNPSDDNSCEDLEEE-p Q9NV79;S310-p SNPSDDNSCEDLEEE 0.265368066946808 0.00117984223282173 -0.356 1.14466666666667 10.9275154977826 48.3711791161969 -0.356 1.14466666666667 0.0807696963588706 1.45506397484175e-05 -2.1434154299611 14.6227971095173 Q9NV79 PCMTD2 Q9NV79.S310.p_PCMTD2 Q9NV79_S306sS310s_2_2_306_310 Q9NV79 Q9NV79|Q9NV79-2|A0A0G2JM70|V9GZ41|Q9NV79-3 Protein-L-isoaspartate O-methyltransferase domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11247.11247.4 13.18 13.18 2.488 3 2 2 0 857.613 3267.4959 S306s S310s TMT10 302 (R) ISNPsDDNsCEDLEEERREEEEK (T) IS(0.0)NPS(0.99)DDNS(0.99)CEDLEEERREEEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCMTD2 41470.5 1 2 5130.1 22.57 HUMAN 1 -10.9275 48.3712 SNQDGNDSDEFM___-p Q86WR0;S204-p SNQDGNDSDEFM___ 0.812891412800423 0.183647783482981 0.0443333333333333 0.134 1.73062509841623 9.67993155051136 0.0443333333333333 0.134 0.671332218286035 0.107648218001489 0.448284676210601 1.92540258707112 Q86WR0 CCDC25 Q86WR0.S204.p_CCDC25 Q86WR0_S204s _1_1_204_204 Q86WR0 Q86WR0|Q86WR0-2 Coiled-coil domain-containing protein 25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26227.26227.4 16.15 16.15 4.795 7 1 1 0 814.0982 3173.4114 S204s TMT10 185 (R) SYSSLMKVENMSSNQDGNDsDEFM (-) S(0.0)Y(0.0)S(0.0)S(0.0)LMKVENMS(0.0)S(0.0)NQDGNDS(0.99)DEFM K:TMT10,s:Phosphorylated S CCDC25 24649.6 11 1 4412.1 31.82 HUMAN 1 1.7306 9.6799 SNQKPVKSPDNSIKM-p Q9UKL0;S460-p SNQKPVKSPDNSIKM 0.1560557092084 0.00885809255924247 -0.437 0.463666666666667 16.2104265691159 29.0874282478061 -0.437 0.463666666666667 0.0239308069367889 0.00123383525448244 -3.10869934389845 6.14984589362108 Q9UKL0 RCOR1 Q9UKL0.S460.p_RCOR1 Q9UKL0_S460s _1_1_460_460 Q9UKL0 Q9UKL0 REST corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20172.20172.4 16.46 13.3 1.309 2 1 1 0 866.1978 3381.8179 S460s TMT10 457 (K) PVKsPDNSIKMPEEEDEAPVLDVR (Y) PVKS(0.99)PDNS(0.0)IKMPEEEDEAPVLDVR K:TMT10,s:Phosphorylated S RCOR1 53440.6 6 7 318.1 366.35 HUMAN 1 -16.2104 29.0874 SNQNGKDSKPSSTPR-p P06748;S214-p SNQNGKDSKPSSTPR 0.537243068570589 0.157585482042155 0.093 -0.167333333333333 4.98728525591562 10.5546697705486 0.093 -0.167333333333333 0.317154935661241 0.0880102030465569 1.10172753671601 -2.07736912486037 P06748 NPM1 P06748.S214.p_NPM1 P06748_S214s _1_1_214_214 P06748 P06748|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.4202.4202.3 12.53 4.99 2.335 5 1 1 0 790.7496 2290.2718 S214s TMT10 207 (K) SNQNGKDsKPSSTPR (S) S(0.0)NQNGKDS(0.99)KPS(0.0)S(0.0)T(0.0)PR K:TMT10,s:Phosphorylated S NPM1 32745.6 3 15 78.1 640.75 HUMAN 1 4.9873 -10.5547 SNQPLLKSPAPPLLH-p Q8N163;S124-p SNQPLLKSPAPPLLH 0.695852540592144 0.93212497171739 -0.0633333333333333 0.0136666666666667 2.95830662078511 0.430304711832515 -0.0633333333333334 0.0136666666666667 0.506021929069087 0.905669054670852 -0.71193110700618 0.124150318124442 Q8N163 CCAR2 Q8N163.S124.p_CCAR2 Q8N163_S124s _1_1_124_124 Q8N163 Q8N163|Q8N163-2 Cell cycle and apoptosis regulator protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27852.27852.5 23.15 23.15 8.539 3 1 1 0 698.4139 3408.0709 S124s TMT10 113 (K) VQTLSNQPLLKsPAPPLLHVAALGQK (Q) VQT(0.0)LS(0.0)NQPLLKS(0.99)PAPPLLHVAALGQK K:TMT10,s:Phosphorylated S CCAR2 103527.3 4 3 891.1 204.52 HUMAN 1 -2.9583 0.4303 SNQRMGRSLLKSKDL-p P28290;S713-p SNQRMGRSLLKSKDL 0.588601036027886 0.250841142164965 -0.107666666666667 -0.225666666666667 4.23871392551592 7.91313548050627 -0.107666666666667 -0.225666666666667 0.376815368645515 0.161691225227564 -0.962493721493127 -1.61958076040943 P28290 SSFA2 P28290.S713.p_SSFA2 P28290_S713s _1_1_713_713 P28290 P28290|P28290-3|E9PHV5 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13560.13560.3 10.72 6.5 99 1 1 1 0 448.2609 1262.8019 S713s TMT10 710 (R) MGRsLLK (S) MGRS(1.0)LLK K:TMT10,s:Phosphorylated S SSFA2 139638.7 1 17 73.1 652.35 HUMAN 1 -4.2387 -7.9131 SNRQLERSGRFGGNP-p Q13148;S273-p SNRQLERSGRFGGNP 0.849547343270056 0.390911568821126 -0.0403333333333333 -0.175333333333333 1.37039951059448 5.42355596906071 -0.0403333333333333 -0.175333333333333 0.729390410023762 0.286843097151529 -0.364371543706981 -1.18088565081615 Q13148 TARDBP Q13148.S273.p_TARDBP Q13148_S273s _1_1_273_273 Q13148 Q13148|Q13148-4 TAR DNA-binding protein 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11894.11894.4 20.72 20.72 20.724 2 1 1 0 716.3406 2782.3719 S273s TMT10 269 (R) QLERsGRFGGNPGGFGNQGGFGNSR (G) QLERS(0.99)GRFGGNPGGFGNQGGFGNS(0.0)R s:Phosphorylated S TARDBP 45081.4 4 3 2002.1 103.31 HUMAN 1 -1.3704 -5.4236 SNSEPNGSVETKNLE-p Q13033-2;S214-p SNSEPNGSVETKNLE 0.275294038676077 0.0192981180328375 0.195666666666667 0.369666666666667 10.603334538901 23.5564839462133 0.195666666666667 0.369666666666667 0.0870295115585926 0.00440911681719081 2.0867535279693 4.68181721728068 Q13033 STRN3 Q13033.2.S214.p_STRN3 Q13033-2_S214s _1_1_214_214 Q13033-2 Q13033|Q13033-2|G3V340 Isoform Alpha of Striatin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21843.21843.3 18.04 18.04 5.139 5 1 1 0 757.3972 2190.2018 S214s TMT10 202 (R) SLLGLSNSEPNGsVETK (N) S(0.0)LLGLS(0.0)NS(0.0)EPNGS(0.99)VET(0.0)K K:TMT10,s:Phosphorylated S STRN3 78142.7 1 5 1014.1 188.21 HUMAN 1 10.6033 23.5565 SNSGRARSDPTHQHR-p Q13627;S529-p SNSGRARSDPTHQHR 0.127767258653097 0.00965613323391043 0.495666666666667 0.632 18.5146140526829 28.4011276489229 0.495666666666667 0.632 0.0140779233000499 0.00144506450993141 3.56717235916625 5.95125511226594 Q13627 DYRK1A Q13627.S529.p_DYRK1A Q13627_S529s _1_1_529_529 Q13627 Q13627 Dual specificity tyrosine-phosphorylation-regulated kinase 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.2819.2819.3 11.26 6.62 3.313 2 1 1 0 505.2452 1433.7559 S529s TMT10 527 (R) ARsDPTHQHR (H) ARS(0.99)DPT(0.0)HQHR s:Phosphorylated S DYRK1A 86095.8 1 3 2424.1 84.13 HUMAN 1 18.5146 28.4011 SNSLDQKTPEANSRA-p O60333-2;T1604-p SNSLDQKTPEANSRA 0.177952626351024 0.299611951856657 0.239 0.140333333333333 14.8387237343291 6.91004254502113 0.239 0.140333333333333 0.0328191724983699 0.20370221222199 2.848258048808 1.44486321591687 O60333 KIF1B O60333.2.T1604.p_KIF1B O60333-2_T1604t _1_1_1604_1604 O60333-2 O60333-4|Q4R9M9|A0A087WWA3|O60333-2 Isoform 2 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6073.6073.3 9.33 9.33 1.454 4 1 1 0 695.6843 2005.0715 T1604t TMT10 1597 (R) SNSLDQKtPEANSR (A) S(0.0)NS(0.0)LDQKT(0.99)PEANS(0.0)R K:TMT10,t:Phosphorylated T KIF1B 200628.3 1 11 606.1 262.24 HUMAN 1 14.8387 6.91 SNSLRRDSPPPPARA-p O96013;S104-p SNSLRRDSPPPPARA 0.942893505001481 0.23018396451088 0.0126666666666667 0.154666666666667 0.503538255067447 8.4035474462581 0.0126666666666667 0.154666666666667 0.890525119814601 0.144425957470531 0.14424756365174 1.70453406314125 O96013 PAK4 O96013.S104.p_PAK4 O96013_S104s _1_1_104_104 O96013 O96013|O96013-4|O96013-2 Serine/threonine-protein kinase PAK 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3416.3621.4 14.76 14.76 5.41 3 1 1 0 465.4927 1778.9823 S104s TMT10 97 (R) SNSLRRDsPPPPAR (A) S(0.0)NS(0.0)LRRDS(0.99)PPPPAR s:Phosphorylated S PAK4 64356.2 10 2 573.1 269.06 HUMAN 1 0.5035 8.4035 SNSPESETDPEEKAG-p F8VU11;T821-p SNSPESETDPEEKAG 0.103884021690019 0.0423677491977485 -0.571333333333333 0.538 20.7557397930133 18.3914560633824 -0.571333333333333 0.538 0.00840283857900012 0.0144828620379669 -4.04305031378983 3.53894922200105 F8VU11 PRPF40B F8VU11.T821.p_PRPF40B F8VU11_S816sS819sT821t_3_3_816_821 F8VU11 F8VU11|Q6NWY9|Q6NWY9-3|Q6NWY9-2 PRP40 pre-mRNA processing factor 40 homolog B (Yeast), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7745.7958.3 8.04 8.04 1.153 4 3 3 0 716.2803 1906.9282 S816s S819s T821t TMT10 814 (K) SNsPEsEtDPEEK (A) S(0.0)NS(0.99)PES(0.99)ET(0.99)DPEEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T PRPF40B 101691.8 2 7 1236.1 163.46 HUMAN 1 -20.7557 18.3915 SNSRDHLSDKESKES-p Q9Y6Q9;S594-p SNSRDHLSDKESKES 0.502330390820957 0.235626283639957 -0.194666666666667 0.17 5.51562790929322 8.26769550761481 -0.194666666666667 0.17 0.280825932118823 0.149015158557702 -1.19776678108727 1.68101783367991 Q9Y6Q9 NCOA3 Q9Y6Q9.S594.p_NCOA3 Q9Y6Q9_S594s _1_1_594_594 Q9Y6Q9 Q9Y6Q9|Q9Y6Q9-5|Q9Y6Q9-3|Q9Y6Q9-2|Q9Y6Q9-4 Nuclear receptor coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4985.4985.3 8.67 8.67 2.475 2 1 1 0 532.9396 1516.8371 S594s Hydrogen 591 (R) DHLsDKESK (E) DHLS(0.99)DKES(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S NCOA3 156203.6 1 6 503.1 290.6 HUMAN 1 -5.5156 8.2677 SNSRKSLSPGVSRDS-p Q9UKV3;S657-p SNSRKSLSPGVSRDS 0.0948633510902073 0.0776309221773109 0.773 -0.683 21.7583199649099 14.7229174485773 0.773 -0.683 0.00667064768227428 0.0337060806140865 4.26688098136663 -2.82484214363121 Q9UKV3 ACIN1 Q9UKV3.S657.p_ACIN1 Q9UKV3_S657s _1_1_657_657 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7944.7944.2 10.36 2.82 1.184 3 1 1 0 556.2894 1031.6047 S657s TMT10 655 (K) SLsPGVSR (D) S(0.0)LS(0.99)PGVS(0.0)R s:Phosphorylated S ACIN1 152258.2 4 20 32.2 899.18 HUMAN 1 21.7583 -14.7229 SNSRRATTPLYHGFK-p Q5T4S7-2;T905-p SNSRRATTPLYHGFK 0.176240941475 0.362634117704378 -0.409 0.102333333333333 14.9720199520595 5.84175923733846 -0.409 0.102333333333333 0.0318271686031749 0.260509806476049 -2.87320513616945 1.25603109043186 Q5T4S7 UBR4 Q5T4S7.2.T905.p_UBR4 Q5T4S7-2_T905t _1_1_905_905 Q5T4S7-2 Q5T4S7-2|Q5T4S7-4|Q5T4S7-3|Q5T4S7-5 Isoform 2 of E3 ubiquitin-protein ligase UBR4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12393.12393.3 14.29 14.29 1.522 3 1 1 0 481.9127 1363.7572 T905t Hydrogen 903 (R) ATtPLYHGFK (E) AT(0.0)T(0.99)PLY(0.0)HGFK K:TMT10-Lys-Only,t:Phosphorylated T UBR4 583136.9 3 7 528.1 281.83 HUMAN 1 -14.972 5.8418 SNSSLDISAIKPNKD-p Q6P0N0;S93-p SNSSLDISAIKPNKD 0.333299394179268 0.39055548873101 -0.239666666666667 -0.0946666666666666 8.90875656912507 5.42899186021409 -0.239666666666667 -0.0946666666666666 0.128565470374576 0.286484291663107 -1.79256817281473 -1.18186796144821 Q6P0N0 MIS18BP1 Q6P0N0.S93.p_MIS18BP1 Q6P0N0_S93s _1_1_93_93 Q6P0N0 Q6P0N0|G5E9K5|Q6P0N0-2 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30032.30032.5 22.18 22.18 1.205 9 1 1 0 736.5917 3598.9605 S93s TMT10 73 (K) NIFQSTMLTEATTSNSSLDIsAIKPNK (D) NIFQS(0.0)T(0.0)MLT(0.0)EAT(0.0)T(0.0)S(0.0)NS(0.0)S(0.0)LDIS(0.99)AIKPNK K:TMT10,s:Phosphorylated S MIS18BP1 129996 1 5 54.1 728.39 HUMAN 1 -8.9088 -5.429 SNSSYLGSDEMGSGD-p Q8TCU6;S1195-p SNSSYLGSDEMGSGD 0.674071856956608 0.140620711387097 0.0566666666666667 0.292333333333333 3.2108731766822 11.2260198386849 0.0566666666666667 0.292333333333333 0.477433273010657 0.0754046304974299 0.762927033135521 2.19474135124073 Q8TCU6 PREX1 Q8TCU6.S1195.p_PREX1 Q8TCU6_S1195sS1200s_2_2_1195_1200 Q8TCU6 Q8TCU6|Q8TCU6-3|Q8TCU6-2 Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20997.20997.4 20.08 20.08 4.091 7 2 2 0 1042.2159 4005.9083 S1195s S1200s TMT10 1188 (R) SNSSYLGsDEMGsGDELPCDMRIPSDKQDK (L) S(0.0)NS(0.0)S(0.0)Y(0.0)LGS(0.99)DEMGS(0.99)GDELPCDMRIPS(0.0)DKQDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PREX1 188881.6 13 17 379.1 336 HUMAN 1 3.2109 11.226 SNTAGSQSQVETEA_-p Q02790;S453-p SNTAGSQSQVETEA_ 0.248600080290762 0.00460926733093943 0.244666666666667 0.604 11.5463583695622 34.2043860983785 0.244666666666667 0.604 0.0700429071092188 0.000379805623008035 2.25211981516915 7.80586463553046 Q02790 FKBP4 Q02790.S453.p_FKBP4 Q02790_S453s _1_1_453_453 Q02790 Q02790 Peptidyl-prolyl cis-trans isomerase FKBP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7377.7377.2 8.61 8.61 2.534 5 1 1 0 859.3783 1637.7816 S453s TMT10 446 (K) SNTAGSQsQVETEA (-) S(0.0)NT(0.0)AGS(0.0)QS(0.99)QVET(0.0)EA s:Phosphorylated S FKBP4 52088.9 2 14 706.1 239.22 HUMAN 1 11.5464 34.2044 SNTPVNETATASDSK-p O15014;T386-p SNTPVNETATASDSK 0.795526882075104 0.00494938312222238 -0.0733333333333333 0.747666666666667 1.91952925002331 33.624396372927 -0.0733333333333334 0.747666666666667 0.642757384705904 0.000434070591040833 -0.490906537714173 7.60127348194077 O15014 ZNF609 O15014.T386.p_ZNF609 O15014_T386t _1_1_386_386 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6106.6106.3 14.53 14.53 1.79 6 1 1 0 777.0272 2249.1029 T386t Hydrogen 375 (R) MRPNSNTPVNEtATASDSK (G) MRPNS(0.0)NT(0.0)PVNET(0.99)AT(0.0)AS(0.0)DS(0.0)K K:TMT10-Lys-Only,t:Phosphorylated T ZNF609 152443.5 1 6 63.1 699.07 HUMAN 1 -1.9195 33.6244 SNTQQSRSPTFSEEL-p Q8N0Z3;S640-p SNTQQSRSPTFSEEL 0.955641444333664 0.485908276393118 -0.01 -0.0783333333333334 0.387482213445118 4.18731831509293 -0.01 -0.0783333333333334 0.914643344753604 0.381301196873305 -0.112287501171387 -0.952603609489725 Q8N0Z3 SPICE1 Q8N0Z3.S640.p_SPICE1 Q8N0Z3_S640s _1_1_640_640 Q8N0Z3 Q8N0Z3 Spindle and centriole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27316.27316.3 14.68 14.68 1.418 3 1 1 0 761.381 2202.1604 S640s TMT10 640 (R) sPTFSEELPVLGDGQQLR (T) S(0.99)PT(0.0)FS(0.0)EELPVLGDGQQLR s:Phosphorylated S SPICE1 96605.1 2 8 556.1 273.19 HUMAN 1 -0.3875 -4.1873 SNVGGLLSPQRKEAL-p Q99504;S438-p SNVGGLLSPQRKEAL 0.297184072075513 0.0149135591220802 -0.207 -0.746 9.92755066024833 25.2809007905912 -0.207 -0.746 0.101682199980194 0.00296421650368534 -1.96912622884426 -5.10880391326322 Q99504 EYA3 Q99504.S438.p_EYA3 Q99504_S438s _1_1_438_438 Q99504 Q99504|Q99504-3|Q99504-5|Q99504-4|Q99504-2|B1APR7 Eyes absent homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13877.13877.3 7.44 7.44 7.44 2 1 1 0 598.6742 1714.0376 S438s TMT10 431 (K) SNVGGLLsPQRK (E) S(0.0)NVGGLLS(0.99)PQRK K:TMT10,s:Phosphorylated S EYA3 63004 1 2 4817.1 26.3 HUMAN 1 -9.9276 -25.2809 SNVGTAISKKFGDMR-p J3KNE7;S122-p SNVGTAISKKFGDMR 0.602266281205279 0.409759757098886 -0.180333333333333 0.141666666666667 4.06709084558696 5.155404905234 -0.180333333333333 0.141666666666667 0.392004376273842 0.305112155104392 -0.929932537992933 1.13222717001605 J3KNE7 NotFound J3KNE7.S122.p_NotFound J3KNE7_S122s _1_1_122_122 J3KNE7 J3KNE7|Q16890|E9PPQ1 Tumor protein D53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19201.19201.3 9.05 9.05 1.841 4 1 1 0 626.0043 1796.0318 S122s TMT10 110 (K) ATAAFSNVGTAIsK (K) AT(0.0)AAFS(0.0)NVGT(0.0)AIS(0.99)K K:TMT10,s:Phosphorylated S TPD52L1 23056.4 1 3 793.3 224.4 HUMAN 1 -4.0671 5.1554 SNVPSGKSTDEEEEA-p Q9P2K3-3;S433-p SNVPSGKSTDEEEEA 0.391198751974399 0.0325710532695654 0.164666666666667 0.277 7.51994665750468 20.0684765000732 0.164666666666667 0.277 0.177013069992655 0.0098435635625113 1.55175463886173 3.89000563786738 Q9P2K3 RCOR3 Q9P2K3.3.S433.p_RCOR3 Q9P2K3-3_S433sT434t_2_2_433_434 Q9P2K3-3 Q9P2K3-3 Isoform 3 of REST corepressor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10437.10651.4 15.53 15.53 1.148 6 2 2 0 784.1076 2973.4802 S433s T434t TMT10 424 (K) SASNVPSGKstDEEEEAQTPQAPR (T) S(0.0)AS(0.0)NVPS(0.0)GKS(0.99)T(0.99)DEEEEAQT(0.0)PQAPR K:TMT10,s:Phosphorylated S,t:Phosphorylated T RCOR3 61384.5 1 8 1817.1 112.96 HUMAN 1 7.5199 20.0685 SNVSPAISIHEIGAV-p P46020-2;S985-p SNVSPAISIHEIGAV 0.796923436722831 0.932203362469907 0.039 -0.0123333333333333 1.90252798075837 0.429658521500724 0.039 -0.0123333333333333 0.645278510119406 0.905803819940098 0.4871063030141 -0.123971872507838 P46020 PHKA1 P46020.2.S985.p_PHKA1 P46020-2_S985s _1_1_985_985 P46020-2 A6NMN0|P46020|P46020-2|A6NIT2|P46020-3 Isoform 2 of Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18673.18673.4 21.78 21.78 2.151 6 1 1 0 761.9099 2964.6519 S985s TMT10 972 (R) SVRPTDSNVSPAIsIHEIGAVGATK (T) S(0.0)VRPT(0.0)DS(0.0)NVS(0.0)PAIS(0.99)IHEIGAVGAT(0.0)K K:TMT10,s:Phosphorylated S PHKA1 136832.8 8 7 2510.2 80.53 HUMAN 1 1.9025 -0.4297 SNVSSPATPTASSSS-p Q12888-2;T1643-p SNVSSPATPTASSSS 0.466667919827382 0.849560880763458 -0.108333333333333 0.0203333333333334 6.10757027784119 0.994551934221305 -0.108333333333333 0.0203333333333334 0.245043378840785 0.795325315775688 -1.30370374872527 0.27248446011835 Q12888 TP53BP1 Q12888.2.T1643.p_TP53BP1 Q12888-2_T1643t _1_1_1643_1643 Q12888-2 Q12888-2 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6576.6576.4 17.42 17.42 3.449 13 1 1 0 673.0922 2609.3783 T1643t TMT10 1636 (R) SNVSSPAtPTASSSSSTTPTRK (I) S(0.0)NVS(0.0)S(0.0)PAT(0.99)PT(0.0)AS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)T(0.0)T(0.0)PT(0.0)RK K:TMT10,t:Phosphorylated T TP53BP1 216167.2 2 68 3.1 2297.07 HUMAN 1 -6.1076 0.9946 SPAALPQSSEKLFQG-p O75582;S367-p SPAALPQSSEKLFQG 0.521309922362563 0.0719128234737837 0.094 0.265333333333333 5.23128061376194 15.1951303450674 0.094 0.265333333333333 0.299827827966531 0.030233398294672 1.14627756898967 2.91319738811048 O75582 RPS6KA5 O75582.S367.p_RPS6KA5 O75582_S367s_1_1_367_367 O75582 O75582|O75582-3|O75582-2 Ribosomal protein S6 kinase alpha-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30481.30481.5 20.73 20.73 1.154 7 1 1 0 1119.3835 5496.9059 M355m S367s TMT10 330 (K) KVPAPFKPVIRDELDVSNFAEEFTEmDPTYSPAALPQsSEK (L) KVPAPFKPVIRDELDVS(0.0)NFAEEFT(0.0)EM(1.0)DPT(0.0)Y(0.0)S(0.0)PAALPQS(0.99)S(0.0)EK K:TMT10,m:Oxidized methionine,s:Phosphorylated S RPS6KA5 90434.3 2 3 2444.1 83.26 HUMAN 1 5.2313 15.1951 SPAAPGQSPTGSVCY-p O75534;S123-p SPAAPGQSPTGSVCY 0.249964348485821 0.159605376371289 -0.204666666666667 -0.177 11.4938226233334 10.4816801063122 -0.204666666666667 -0.177 0.0708953478395206 0.0895018452824662 -2.24286085935171 -2.06465266464152 O75534 CSDE1 O75534.S123.p_CSDE1 O75534_S123s _1_1_123_123 O75534 O75534-4 Cold shock domain-containing protein E1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9865.9865.3 19.64 19.64 3.485 5 1 1 0 691.6482 1992.9647 S123s TMT10 116 (K) SPAAPGQsPTGSVCYER (N) S(0.0)PAAPGQS(0.99)PT(0.0)GS(0.0)VCY(0.0)ER C:Carbamidomethylation,s:Phosphorylated S CSDE1 89738.9 2 2 1077.1 180.35 HUMAN 1 -11.4938 -10.4817 SPAAPRISPGDQRLA-p Q5SPY9;S314-p SPAAPRISPGDQRLA 0.222294886715951 0.635181003664513 0.209666666666667 0.051 12.5683945660955 2.68208028806022 0.209666666666667 0.051 0.0553554701095825 0.539252256638065 2.43357696294894 0.65497840272596 Q5SPY9 NotFound Q5SPY9.S314.p_NotFound Q5SPY9_S314s _1_1_314_314 Q5SPY9 Q5SPY9|Q9NQX5 Neural proliferation differentiation and control protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8591.8591.3 9.14 9.14 4.489 2 1 1 0 629.3214 1805.982 S314s TMT10 304 (K) APGSPAAPRIsPGDQR (L) APGS(0.0)PAAPRIS(0.99)PGDQR s:Phosphorylated S NPDC1 43434.2 4 2 1634.1 125.02 HUMAN 1 12.5684 2.6821 SPADFQNSQSPVQDQ-p P78332;S360-p SPADFQNSQSPVQDQ 0.0949352610946194 0.443227943427826 0.450333333333333 0.123666666666667 21.6783391927121 4.70519833156958 0.450333333333333 0.123666666666667 0.00679463419951504 0.33843881584809 4.24875873653711 1.04954461401093 P78332 RBM6 P78332.S360.p_RBM6 P78332_S360sS362s_2_2_360_362 P78332 P78332|E9PGM9|F8WCA5|P78332-3 RNA-binding protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14864.14864.4 8 8 1.134 4 2 2 0 956.4196 3662.7247 S360s S362s TMT10 341 (R) EGETQGVAFEHESPADFQNsQsPVQDQDK (S) EGET(0.0)QGVAFEHES(0.0)PADFQNS(0.99)QS(0.99)PVQDQDK K:TMT10,s:Phosphorylated S RBM6 129269.2 1 6 1383.1 148.19 HUMAN 1 21.6783 4.7052 SPAGDRNSVGSEGSV-p Q8WXE0;S403-p SPAGDRNSVGSEGSV 0.233628206047255 0.0756341712467452 -0.189666666666667 -0.209666666666667 12.1148295458533 14.8829586683988 -0.189666666666667 -0.209666666666667 0.0614493149177725 0.0324865904297997 -2.35271882454677 -2.85468366604181 Q8WXE0 CASKIN2 Q8WXE0.S403.p_CASKIN2 Q8WXE0_S403s _1_1_403_403 Q8WXE0 Q8WXE0|Q8WXE0-2 Caskin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14089.14089.2 15.16 10.09 2.339 6 1 1 0 1355.155 2629.3379 S403s TMT10 390 (R) VGLSPDSPAGDRNsVGSEGSVGSIR (S) VGLS(0.0)PDS(0.0)PAGDRNS(0.99)VGS(0.0)EGS(0.0)VGS(0.0)IR s:Phosphorylated S CASKIN2 127351.5 1 3 984.1 192.08 HUMAN 1 -12.1148 -14.883 SPAGLDLSNGHLDTF-p O15156;S487-p SPAGLDLSNGHLDTF 0.403838199113338 0.663184445175642 -0.112 -0.054 7.27074013201931 2.44349592306813 -0.112 -0.054 0.18746749955511 0.5697054940828 -1.50832656504354 -0.604845716997278 O15156 ZBTB7B O15156.S487.p_ZBTB7B O15156_S487s _1_1_487_487 O15156 O15156 Zinc finger and BTB domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16431.16431.4 23.19 23.19 1.127 6 1 1 0 1003.2536 3930.0299 S487s TMT10 463 (R) RKDDAPPHYPPPSTAAASPAGLDLsNGHLDTFR (L) RKDDAPPHY(0.0)PPPS(0.0)T(0.0)AAAS(0.0)PAGLDLS(0.99)NGHLDT(0.0)FR K:TMT10,s:Phosphorylated S ZBTB7B 58938.8 2 7 701.1 240.09 HUMAN 1 -7.2707 -2.4435 SPAGQHHSPISSRHH-p Q5T200;S325-p SPAGQHHSPISSRHH 0.0922043466391237 0.0144840230392695 0.448666666666667 0.546666666666667 22.0518515523656 25.4830340518933 0.448666666666667 0.546666666666667 0.0062346897174008 0.00282941463008578 4.33379650376167 5.16056013037404 Q5T200 ZC3H13 Q5T200.S325.p_ZC3H13 Q5T200_S318sS325s_2_2_318_325 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3037.3037.3 7.96 7.96 1.103 6 2 2 0 570.2337 1548.7513 S318s S325s Hydrogen 316 (R) STsPAGQHHsPISSR (H) S(0.0)T(0.0)S(0.99)PAGQHHS(0.99)PIS(0.0)S(0.0)R s:Phosphorylated S ZC3H13 197316.7 3 35 24.1 987.82 HUMAN 1 22.0519 25.483 SPAGTALSPSGHTKL-p P32322-3;S328-p SPAGTALSPSGHTKL 0.134738301810513 0.149559196254141 0.349333333333333 0.148333333333333 17.8617723912154 10.8587538051554 0.349333333333333 0.148333333333333 0.0163614865953959 0.0820586975494026 3.43434455971241 2.13043585025374 P32322 PYCR1 P32322.3.S328.p_PYCR1 P32322-3_S328s _1_1_328_328 P32322-3 P32322-3|E2QRB3 Isoform 3 of Pyrroline-5-carboxylate reductase 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14006.14006.3 20.42 12.14 3.949 5 1 1 0 845.1384 2453.4331 S328s TMT10 317 (K) VKLDSPAGTALsPSGHTK (L) VKLDS(0.0)PAGT(0.0)ALS(0.99)PS(0.0)GHT(0.0)K K:TMT10,s:Phosphorylated S PYCR1 36208.1 4 4 2360.1 86.54 HUMAN 1 17.8618 10.8588 SPAISRHSPVQMNRN-p Q0JRZ9;S394-p SPAISRHSPVQMNRN 0.539507901385774 0.191485348462373 0.0843333333333333 0.147333333333333 4.95219061057929 9.44176174849524 0.0843333333333333 0.147333333333333 0.319728197235375 0.113716589227936 1.09528944390181 1.88415150483448 Q0JRZ9 FCHO2 Q0JRZ9.S394.p_FCHO2 Q0JRZ9_S394s _1_1_394_394 Q0JRZ9 Q0JRZ9|Q0JRZ9-3 F-BAR domain only protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20389.20389.3 16.69 10.14 1.13 5 1 1 0 896.1436 2606.4398 S394s TMT10 379 (K) VSIGNITLSPAISRHsPVQMNR (N) VS(0.0)IGNIT(0.0)LS(0.0)PAIS(0.0)RHS(0.99)PVQMNR s:Phosphorylated S FCHO2 89436.3 6 4 864.1 210.2 HUMAN 1 4.9522 9.4418 SPALASLSRSSSGRS-p J3KQC6;S97-p SPALASLSRSSSGRS 0.683561892694876 0.169166859447367 0.0613333333333333 0.141666666666667 3.09788152350647 10.1493970124845 0.0613333333333333 0.141666666666667 0.490017790404412 0.0966185017710125 0.740223976428717 2.00685293954257 J3KQC6 NotFound J3KQC6.S97.p_NotFound J3KQC6_S97s _1_1_97_97 J3KQC6 Q9BYE2|J3KQC6|E9PRA0|Q9BYE2-2 Transmembrane protease serine 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12980.13310.2 7.62 6.75 1.3 3 1 1 0 641.3425 1201.7102 S97s TMT10 89 (R) ASPALASLsR (S) AS(0.0)PALAS(0.0)LS(0.99)R s:Phosphorylated S TMPRSS13 64250 1 6 1604.1 128.27 HUMAN 1 3.0979 10.1494 SPALGANSPWNSKPP-p Q86U70;S388-p SPALGANSPWNSKPP 0.439415550353998 0.010893084594687 0.208 0.841666666666667 6.5772107391321 27.5004307392359 0.208 0.841666666666667 0.219927190398547 0.00177810304658916 1.38678369391608 5.69817388680254 Q86U70 LDB1 Q86U70.S388.p_LDB1 Q86U70_S388s_1_1_388_388 Q86U70 Q86U70|Q86U70-2 LIM domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23763.23763.4 27.69 23.62 0 8 1 1 0 1287.6084 5066.4495 N380n S388s TMT10 361 (R) LENTQFDAANGIDDEDSFNnSPALGANsPWNSKPPSSQESK (S) LEN(0.0)T(0.0)QFDAAN(0.0)GIDDEDS(0.0)FN(0.50)N(0.50)S(0.0)PALGAN(0.0)S(0.99)PWN(0.0)S(0.0)KPPS(0.0)S(0.0)QES(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S LDB1 47159.4 2 7 765.1 229.16 HUMAN 1 6.5772 27.5004 SPALGVHSFSGVQRF-p Q9H1A4;S362-p SPALGVHSFSGVQRF 0.808652261368213 0.0654881186106886 0.0573333333333333 -0.276333333333333 1.77160394031053 15.752915239775 0.0573333333333334 -0.276333333333333 0.665027502283038 0.0265893962409331 0.457606224455787 -3.01879751745401 Q9H1A4 ANAPC1 Q9H1A4.S362.p_ANAPC1 Q9H1A4_S355sS362s_2_2_355_362 Q9H1A4 Q9H1A4 Anaphase-promoting complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11664.11664.3 7.2 7.2 2.708 3 2 2 0 680.3188 1879.0136 S355s S362s TMT10 353 (R) AHsPALGVHsFSGVQR (F) AHS(0.99)PALGVHS(0.99)FS(0.0)GVQR s:Phosphorylated S ANAPC1 218664.2 1 17 460.1 305.66 HUMAN 1 1.7716 -15.7529 SPAPDADSCCKEPLA-p Q8NAX2;S186-p SPAPDADSCCKEPLA 0.273277902228437 0.709587739141651 0.156333333333333 -0.0363333333333333 10.6692926697687 2.04953435818866 0.156333333333333 -0.0363333333333333 0.0857177441327378 0.623801714662626 2.0982680539347 -0.519683156160495 Q8NAX2 KDF1 Q8NAX2.S186.p_KDF1 Q8NAX2_S186s _1_1_186_186 Q8NAX2 Q8NAX2 Keratinocyte differentiation factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15492.15492.3 13.02 6.85 4.464 3 1 1 0 1007.8027 2941.4258 S186s TMT10 177 (R) ATSPAPDADsCCKEPLADPPPMR (H) AT(0.0)S(0.0)PAPDADS(0.99)CCKEPLADPPPMR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KDF1 44496.8 2 4 2331.1 87.55 HUMAN 1 10.6693 -2.0495 SPAPGPGTPTGTPTR-p Q4KMP7;T148-p SPAPGPGTPTGTPTR 0.958063692418634 0.112779842324347 0.011 -0.326666666666667 0.361409122378309 12.499748990886 0.011 -0.326666666666667 0.920150968904564 0.0562373827762424 0.105009473755633 -2.42003574512045 Q4KMP7 TBC1D10B Q4KMP7.T148.p_TBC1D10B Q4KMP7_T148t _1_1_148_148 Q4KMP7 Q4KMP7 TBC1 domain family member 10B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10740.10740.5 20.59 20.04 3.638 7 1 1 0 700.1613 3416.8174 T148t TMT10 125 (R) ALAAGADSPKTEEARPSPAPGPGtPTGTPTR (T) ALAAGADS(0.0)PKT(0.0)EEARPS(0.0)PAPGPGT(0.99)PT(0.0)GT(0.0)PT(0.0)R K:TMT10,t:Phosphorylated T TBC1D10B 87710.7 6 3 462.1 304.34 HUMAN 1 0.3614 -12.4997 SPAPPAISPIIKNAI-p Q00587;S113-p SPAPPAISPIIKNAI 0.67602030576956 0.022724566391274 -0.0593333333333333 -0.405 3.18520333860331 22.4416506993176 -0.0593333333333333 -0.405 0.480263593558742 0.00569947601110935 -0.757784577197842 -4.41886666203606 Q00587 CDC42EP1 Q00587.S113.p_CDC42EP1 Q00587_S101sS113s_2_2_101_113 Q00587 Q00587|Q00587-2 Cdc42 effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.28879.28879.3 12.17 12.17 1.828 3 2 2 0 820.7644 2300.3452 S101s S113s TMT10 99 (R) MAsPPAPSPAPPAIsPIIK (N) MAS(0.99)PPAPS(0.0)PAPPAIS(0.99)PIIK K:TMT10,s:Phosphorylated S CDC42EP1 40408.2 2 10 1362.1 149.93 HUMAN 1 -3.1852 -22.4417 SPAPPRHTPDQSPGM-p Q7Z2K8;T60-p SPAPPRHTPDQSPGM 0.032486563457913 0.11771865620867 0.633 0.188 34.8648080082955 12.251582747994 0.633 0.188 0.000326226471805219 0.0595445099258726 8.06012304314758 2.37582467015895 Q7Z2K8 GPRIN1 Q7Z2K8.T60.p_GPRIN1 Q7Z2K8_T60t _1_1_60_60 Q7Z2K8 Q7Z2K8|Q7Z2K8-2 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4812.4812.4 20.66 20.66 5.316 4 1 1 0 582.5262 2247.1138 T60t TMT10 52 (K) ASPAPPRHtPDQSPGMESR (H) AS(0.0)PAPPRHT(0.99)PDQS(0.0)PGMES(0.0)R t:Phosphorylated T GPRIN1 103196.3 2 1 292.1 381.4 HUMAN 1 34.8648 12.2516 SPAPRPQSPARAREE-p Q9NWA0;S53-p SPAPRPQSPARAREE 0.125003663942402 0.376225771726283 0.301666666666667 0.143666666666667 18.7869162644485 5.63665974917729 0.301666666666667 0.143666666666667 0.0132223416170766 0.273107750477405 3.6233100919088 1.21928228743588 Q9NWA0 MED9 Q9NWA0.S53.p_MED9 Q9NWA0_S46sS53s_2_2_46_53 Q9NWA0 Q9NWA0|J3KTK5 Mediator of RNA polymerase II transcription subunit 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23789.23789.5 12.91 12.91 4.044 5 2 2 0 1096.7595 5319.853 S46s S53s TMT10 11 (R) QAEDVLPPTSDQPLPDTKPLPPPQPPPVPAPQPQQsPAPRPQsPAR (A) QAEDVLPPT(0.0)S(0.0)DQPLPDT(0.0)KPLPPPQPPPVPAPQPQQS(0.99)PAPRPQS(0.99)PAR K:TMT10,s:Phosphorylated S MED9 16516.6 1 2 3857.1 41.62 HUMAN 1 18.7869 5.6367 SPAPWKRSRSRASPA-p Q9UQ35;S1864-p SPAPWKRSRSRASPA 0.327196097758463 0.742197460218764 -0.242333333333333 0.113333333333333 9.08087312610889 1.78460735112943 -0.242333333333333 0.113333333333333 0.123569897771963 0.663039290836205 -1.82236346034583 0.460503772801837 Q9UQ35 SRRM2 Q9UQ35.S1864.p_SRRM2 Q9UQ35_S1864s _1_1_1864_1864 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7920.7920.4 8.02 8.02 1.175 3 1 1 0 431.7411 1643.9746 S1864s TMT10 1856 (R) TSPAPWKRsR (S) T(0.0)S(0.0)PAPWKRS(0.99)R K:TMT10,s:Phosphorylated S SRRM2 300351.7 1 120 2.1 3310.34 HUMAN 1 -9.0809 1.7846 SPARATNSPKPHMVP-p O75179;S1940-p SPARATNSPKPHMVP 0.754445686240657 0.0020346511457182 -0.0533333333333333 -1.01966666666667 2.33835824935667 42.0591663987252 -0.0533333333333334 -1.01966666666667 0.583665704002425 6.22419743306734e-05 -0.582495230895031 -11.0974673732883 O75179 ANKRD17 O75179.S1940.p_ANKRD17 O75179_S1940s _1_1_1940_1940 O75179 O75179|O75179-2|O75179-7|O75179-6|O75179-4 Ankyrin repeat domain-containing protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4609.4609.3 16.04 16.04 1.708 2 1 1 0 548.6147 1563.8627 S1940s Hydrogen 1937 (R) ATNsPKPHMVPR (H) AT(0.0)NS(0.99)PKPHMVPR K:TMT10-Lys-Only,s:Phosphorylated S ANKRD17 276135.9 5 10 287.2 383.69 HUMAN 1 -2.3384 -42.0592 SPARLQKSPEKSPRP-p Q7L590-2;S150-p SPARLQKSPEKSPRP 0.427414948238645 0.000952253650599092 -0.177 -2.36733333333333 6.79717574928764 65.2872456517987 -0.177 -2.36733333333333 0.209065525821624 2.95988906890119e-07 -1.42546107564463 -30.2420224437366 Q7L590 MCM10 Q7L590.2.S150.p_MCM10 Q7L590-2_S150s _1_1_150_150 Q7L590-2 Q7L590-2|Q5T670 Isoform 2 of Protein MCM10 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9388.9388.3 9.07 1.94 99 1 1 1 0 532.9828 1516.9666 S150s TMT10 147 (R) LQKsPEK (S) LQKS(1.0)PEK K:TMT10,s:Phosphorylated S MCM10 99223.3 3 10 1720.2 119.54 HUMAN 1 -6.7972 -65.2872 SPARLQKSPVEKSPR-p Q7L590;S150-p SPARLQKSPVEKSPR 0.343120598282226 0.000952253650599092 -0.149666666666667 -1.69066666666667 8.63044386649334 53.1919768083373 -0.149666666666667 -1.69066666666667 0.137074166367363 4.79515134722586e-06 -1.74439127212233 -18.0107659608572 Q7L590 MCM10 Q7L590.S150.p_MCM10 Q7L590_S150s _1_1_150_150 Q7L590 Q7L590 Protein MCM10 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10955.10955.3 9.38 5.97 99 1 1 1 0 566.0058 1616.035 S150s TMT10 147 (R) LQKsPVEK (S) LQKS(1.0)PVEK K:TMT10,s:Phosphorylated S MCM10 99322.4 2 3 1720.1 119.54 HUMAN 1 -8.6304 -53.192 SPARPCPSPGPAAAS-p Q9BQ89;S169-p SPARPCPSPGPAAAS 0.181080338359562 0.0160189558243031 0.231 -0.376333333333333 14.6285175718672 24.7983249694458 0.231 -0.376333333333333 0.0344467491814446 0.00331258860089733 2.80906534465323 -4.98672066041189 Q9BQ89 FAM110A Q9BQ89.S169.p_FAM110A Q9BQ89_S162sS169s_2_2_162_169 Q9BQ89 Q9BQ89 Protein FAM110A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13051.13051.5 10.72 10.72 2.484 4 2 2 0 775.7986 3715.0288 S162s S169s TMT10 153 (R) RVDVRPLPAsPARPCPsPGPAAASSPARPPGLQR (S) RVDVRPLPAS(0.99)PARPCPS(0.99)PGPAAAS(0.0)S(0.0)PARPPGLQR C:Carbamidomethylation,s:Phosphorylated S FAM110A 31612.3 3 8 2320.1 87.91 HUMAN 1 14.6285 -24.7983 SPASPAGSPSADFAV-p Q96C92;S247-p SPASPAGSPSADFAV 0.924650609802006 0.380757797341537 0.017 -0.0956666666666667 0.670335378434133 5.57197769435645 0.017 -0.0956666666666667 0.85697166411951 0.277205747500639 0.189010420703437 -1.20765197823643 Q96C92 SDCCAG3 Q96C92.S247.p_SDCCAG3 Q96C92_S247s _1_1_247_247 Q96C92 Q96C92|Q96C92-2|Q96C92-3|Q96C92-4 Serologically defined colon cancer antigen 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16512.16512.3 21.51 21.51 1.863 5 1 1 0 874.0808 2540.2579 S247s TMT10 239 (R) VSPASPAGsPSADFAVHGESLGDR (H) VS(0.0)PAS(0.0)PAGS(0.99)PS(0.0)ADFAVHGES(0.0)LGDR s:Phosphorylated S SDCCAG3 48302.7 3 2 1849.1 111.15 HUMAN 1 0.6703 -5.572 SPATGILSPRGDDYF-p P49792;S955-p SPATGILSPRGDDYF 0.191344692512221 0.164306587222076 0.211666666666667 -0.282666666666667 14.0235503575356 10.3128642170934 0.211666666666667 -0.282666666666667 0.039595420933059 0.0930494002629329 2.69724340060056 -2.03526971826148 P49792 RANBP2 P49792.S955.p_RANBP2 P49792_S955s _1_1_955_955 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21494.21494.2 12.22 7.98 4.112 3 1 1 0 792.4055 1503.8369 S955s TMT10 946 (R) FESPATGILsPR (G) FES(0.0)PAT(0.0)GILS(0.99)PR s:Phosphorylated S RANBP2 362585.9 3 15 9.1 1298.62 HUMAN 1 14.0236 -10.3129 SPATNHSSPASTPKR-p Q14687;S95-p SPATNHSSPASTPKR 0.378389324662461 0.00800154933185789 0.149666666666667 0.443666666666667 7.79640607454098 29.8881347699023 0.149666666666667 0.443666666666667 0.166096083698224 0.00102609252308148 1.59982147417535 6.38808455367266 Q14687 GSE1 Q14687.S95.p_GSE1 Q14687_S95s _1_1_95_95 Q14687 Q14687|Q14687-3 Genetic suppressor element 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10103.10103.3 16.72 16.72 1.188 13 1 1 0 1008.8254 2944.49 S95s TMT10 76 (R) GSSLSSESSPVSSPATNHSsPASTPK (R) GS(0.0)S(0.0)LS(0.0)S(0.0)ES(0.0)S(0.0)PVS(0.0)S(0.0)PAT(0.0)NHS(0.0)S(0.99)PAS(0.0)T(0.0)PK K:TMT10,s:Phosphorylated S GSE1 136446.7 3 3 221.1 428.09 HUMAN 1 7.7964 29.8881 SPAVIPLSPKKAPAT-p E9PAV3;S1411-p SPAVIPLSPKKAPAT 0.120581410713125 0.00293784493701977 -0.406333333333333 -0.689 19.0981877557712 38.1963552156424 -0.406333333333333 -0.689 0.0123078225021758 0.000151483202670419 -3.68802883377252 -9.34896830696571 E9PAV3 NACA E9PAV3.S1411.p_NACA E9PAV3_S1411s _1_1_1411_1411 E9PAV3 E9PAV3 Nascent polypeptide-associated complex subunit alpha, muscle-specific form HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21365.21365.3 14.79 14.79 10.627 3 1 1 0 639.688 1837.0835 S1411s TMT10 1400 (K) GDPTSPAVIPLsPK (K) GDPT(0.0)S(0.0)PAVIPLS(0.99)PK K:TMT10,s:Phosphorylated S NACA 206102.3 1 9 533.1 279.72 HUMAN 1 -19.0982 -38.1964 SPAVKQGSPVEPKAT-p Q9BY89;S1019-p SPAVKQGSPVEPKAT 0.113128338411947 0.00759424447007243 -0.387333333333333 -1.08433333333333 19.7516845915907 30.268512815579 -0.387333333333333 -1.08433333333333 0.010588429292869 0.000940045161575409 -3.82586070903728 -6.5038063807321 Q9BY89 KIAA1671 Q9BY89.S1019.p_KIAA1671 Q9BY89_S1019s _1_1_1019_1019 Q9BY89 Q9BY89 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9879.9879.3 17.36 11.35 7.954 3 1 1 0 812.4442 2355.3487 S1019s TMT10 1009 (R) DQTSPAVKQGsPVEPK (A) DQT(0.0)S(0.0)PAVKQGS(0.99)PVEPK K:TMT10,s:Phosphorylated S KIAA1671 197734.4 6 14 105.1 590.35 HUMAN 1 -19.7517 -30.2685 SPAYSDISDAGEDGE-p O15014;S849-p SPAYSDISDAGEDGE 0.446807749322286 0.0384554223233359 -0.206 0.294 6.45475791639487 19.0096378312671 -0.206 0.294 0.226216463340652 0.0125613471145642 -1.3651916359228 3.66634161787224 O15014 ZNF609 O15014.S849.p_ZNF609 O15014_S842sS846sS849s_3_3_842_849 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19267.19267.5 15.7 15.7 1.148 6 3 3 0 674.5035 3128.5838 S842s S846s S849s TMT10 840 (K) TNsPAYsDIsDAGEDGEGKVDSVK (S) T(0.0)NS(0.99)PAY(0.0)S(0.99)DIS(0.99)DAGEDGEGKVDS(0.0)VK K:TMT10,s:Phosphorylated S ZNF609 152443.5 3 40 63.1 699.07 HUMAN 1 -6.4548 19.0096 SPCCRFDSPRGPPPP-p Q9H4L4;S188-p SPCCRFDSPRGPPPP 0.0869195095593095 0.58973592776231 0.330666666666667 0.0733333333333333 22.6405696763099 3.10156980508945 0.330666666666667 0.0733333333333333 0.00544431233579331 0.489601815428454 4.46996869832105 0.740861814315324 Q9H4L4 SENP3 Q9H4L4.S188.p_SENP3 Q9H4L4_S188s _1_1_188_188 Q9H4L4 Q9H4L4|A0A087X0R7 Sentrin-specific protease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7828.8033.3 12.59 9.09 99 1 1 1 0 511.2593 1451.7957 S188s TMT10 186 (R) FDsPRGPPPPR (L) FDS(1.0)PRGPPPPR s:Phosphorylated S SENP3 65636.2 5 5 396.1 329.46 HUMAN 1 22.6406 3.1016 SPCETISSPSSTLES-p Q9C0D5;S214-p SPCETISSPSSTLES 0.151580878479368 0.46089878760727 -0.494333333333333 -0.082 16.4976796084371 4.48598961313038 -0.494333333333333 -0.082 0.0223991758426263 0.355959869341867 -3.16434285307862 -1.00877316314668 Q9C0D5 TANC1 Q9C0D5.S214.p_TANC1 Q9C0D5_S214s _1_1_214_214 Q9C0D5 Q9C0D5 Protein TANC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16020.16020.2 11.69 11.69 1.143 8 1 1 0 1124.5452 2168.1157 S214s TMT10 207 (K) SPCETISsPSSTLESK (D) S(0.0)PCET(0.0)IS(0.0)S(0.99)PS(0.0)S(0.0)T(0.0)LES(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TANC1 204383.7 2 6 678.1 246.63 HUMAN 1 -16.4977 -4.486 SPCGTSKSPNREWEV-p O75376-2;S1015-p SPCGTSKSPNREWEV 0.250528767860887 0.0221946483915287 0.169333333333333 0.319 11.4732089211911 22.5865861364504 0.169333333333333 0.319 0.071232651081618 0.00551240840653556 2.23922952691127 4.45250008470532 O75376 NCOR1 O75376.2.S1015.p_NCOR1 O75376-2_S1015s _1_1_1015_1015 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21563.21563.4 16.94 16.94 16.937 2 1 1 0 794.6615 3095.6588 S1015s TMT10 1015 (K) sPNREWEVLQPAPHQVITNLPEGVR (L) S(0.99)PNREWEVLQPAPHQVIT(0.0)NLPEGVR s:Phosphorylated S NCOR1 259453.1 5 5 35.1 889.74 HUMAN 1 11.4732 22.5866 SPCLFVGTSLGMVLI-p Q9Y2K9;T857-p SPCLFVGTSLGMVLI 0.663480609588847 0.211983976313256 -0.0583333333333333 0.221666666666667 3.33264808668323 8.86281463882498 -0.0583333333333333 0.221666666666667 0.464232125925286 0.12993272182225 -0.787203654782788 1.78398460983719 Q9Y2K9 STXBP5L Q9Y2K9.T857.p_STXBP5L Q9Y2K9_T857tS858sS866s_3_3_857_866 Q9Y2K9 Q9Y2K9|E9PFI2|C9JCY1|C9K0E4|C9JPK3 Syntaxin-binding protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5065.5065.5 9.12 3.59 6.871 6 3 3 0 814.9919 3831.0597 T857t S858s S866s Hydrogen 844 (R) KNDSTISPCLFVGtsLGMVLIIsLNLPLADEQR (F) KNDS(0.0)T(0.0)IS(0.0)PCLFVGT(0.99)S(0.99)LGMVLIIS(0.99)LNLPLADEQR K:TMT10-Lys-Only,C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S STXBP5L 133652.9 1 3 4722.1 27.46 HUMAN 1 -3.3326 8.8628 SPCPKQKSQTPPRRS-p Q9UQ35;S790-p SPCPKQKSQTPPRRS 0.181245294135483 0.038853936371035 0.337333333333333 0.517666666666667 14.6194226355732 18.939606728434 0.337333333333333 0.517666666666667 0.0345189626855071 0.012765544008438 2.80737364493038 3.6517950904004 Q9UQ35 SRRM2 Q9UQ35.S790.p_SRRM2 Q9UQ35_S790sT792t_2_2_790_792 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4314.4314.3 7.42 7.42 99 2 2 2 0 490.5673 1326.7803 Q788q S790s T792t Hydrogen 788 (K) qKsQtPPRR (S) Q(1.0)KS(1.0)QT(1.0)PPRR K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S,t:Phosphorylated T SRRM2 300351.7 1 185 2.1 3310.34 HUMAN 1 14.6194 18.9396 SPDEMNNSPNFEEKK-p Q14687;S857-p SPDEMNNSPNFEEKK 0.952606731320845 0.092090215741124 -0.00900000000000001 -0.224666666666667 0.416554143048651 13.7006606460392 -0.00900000000000001 -0.224666666666667 0.908541115211427 0.0426514632728357 -0.120359505305721 -2.636581039596 Q14687 GSE1 Q14687.S857.p_GSE1 Q14687_S857s _1_1_857_857 Q14687 Q14687 Genetic suppressor element 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14813.14813.3 17.3 17.3 5.792 3 1 1 0 899.4365 2616.3219 S857s TMT10 849 (R) YSPDEMNNsPNFEEKK (K) Y(0.0)S(0.0)PDEMNNS(0.99)PNFEEKK K:TMT10,s:Phosphorylated S GSE1 136446.7 5 12 221.1 428.09 HUMAN 1 -0.4166 -13.7007 SPDFPVPSPYLLSDK-p Q5T5X7;S717-p SPDFPVPSPYLLSDK 0.112544694105773 0.0173356761367885 -0.632666666666667 0.528666666666667 19.8080919609046 24.2973477000923 -0.632666666666667 0.528666666666667 0.0104517930978133 0.00371762200394819 -3.83788534927046 4.86214225540621 Q5T5X7 BEND3 Q5T5X7.S717.p_BEND3 Q5T5X7_S717s _1_1_717_717 Q5T5X7 Q5T5X7 BEN domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.37291.37291.4 19.37 19.37 2.649 4 1 1 0 794.6793 3095.7321 S717s TMT10 701 (K) IPLDELVVPSPDFPVPsPYLLSDK (E) IPLDELVVPS(0.0)PDFPVPS(0.99)PY(0.0)LLS(0.0)DK K:TMT10,s:Phosphorylated S BEND3 95614 1 7 2481.1 81.71 HUMAN 1 -19.8081 24.2973 SPDHRRRSYRDLDKP-p Q8NAV1;S216-p SPDHRRRSYRDLDKP 0.203469268152067 0.766062972058908 -0.438333333333333 0.0436666666666667 13.3998873098807 1.59865135910982 -0.438333333333333 0.0436666666666667 0.0457100050228591 0.692045842730649 -2.58338036373184 0.417919388228473 Q8NAV1 PRPF38A Q8NAV1.S216.p_PRPF38A Q8NAV1_S216s _1_1_216_216 Q8NAV1 Q8NAV1|Q8NAV1-2 Pre-mRNA-splicing factor 38A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6476.6476.2 9.16 3.7 7.162 2 1 1 0 603.2924 1125.6102 S216s Hydrogen 216 (R) sYRDLDK (P) S(0.99)Y(0.0)RDLDK K:TMT10-Lys-Only,s:Phosphorylated S PRPF38A 37704.1 5 2 1570.1 130.77 HUMAN 1 -13.3999 1.5987 SPDIIVLSDNEASSP-p Q8WXI9;S129-p SPDIIVLSDNEASSP 0.647618704185873 0.289494723113874 0.0616666666666667 -0.133 3.53489475202871 7.10304459016072 0.0616666666666667 -0.133 0.443108952768322 0.194847815428053 0.827110338991701 -1.47862428670248 Q8WXI9 GATAD2B Q8WXI9.S129.p_GATAD2B Q8WXI9_S129s _1_1_129_129 Q8WXI9 Q8WXI9|A0A0U1RRM1 Transcriptional repressor p66-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25094.25094.3 19.61 19.61 4.365 5 1 1 0 774.0585 2240.1972 S129s TMT10 119 (R) LTPSPDIIVLsDNEASSPR (S) LT(0.0)PS(0.0)PDIIVLS(0.99)DNEAS(0.0)S(0.0)PR s:Phosphorylated S GATAD2B 65601.9 11 2 870.1 209.9 HUMAN 1 3.5349 -7.103 SPDKPGGSPSASRRK-p Q9Y3T9;S56-p SPDKPGGSPSASRRK 0.225535098799466 0.663527066558177 0.300333333333333 -0.114333333333333 12.424595819429 2.439990626024 0.300333333333333 -0.114333333333333 0.0572190203636961 0.570165502946159 2.40788047886218 -0.604101522413046 Q9Y3T9 NOC2L Q9Y3T9.S56.p_NOC2L Q9Y3T9_S56s _1_1_56_56 Q9Y3T9 Q9Y3T9 Nucleolar complex protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4064.4064.4 10.24 6.73 1.271 4 1 1 0 552.7851 2128.1511 S56s TMT10 45 (R) EAARSPDKPGGsPSASR (R) EAARS(0.0)PDKPGGS(0.99)PS(0.0)AS(0.0)R K:TMT10,s:Phosphorylated S NOC2L 85773.7 4 3 1605.1 128.26 HUMAN 1 12.4246 -2.44 SPDLALDSPGTDHFV-p Q8TAV0-3;S243-p SPDLALDSPGTDHFV 0.233628206047255 0.0359465823064986 -0.228666666666667 0.280333333333333 12.1164503512841 19.4415022688692 -0.228666666666667 0.280333333333333 0.0614263860515963 0.0113723383700529 -2.35300678754973 3.75671198294315 Q8TAV0 FAM76A Q8TAV0.3.S243.p_FAM76A Q8TAV0-3_S243s _1_1_243_243 Q8TAV0-3 Q8TAV0-3|E9PQL1 Isoform 3 of Protein FAM76A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31733.31733.5 14.83 11.29 1.224 8 1 1 0 884.4583 4338.3112 S243s TMT10 223 (K) SKFESITTNGDSFSPDLALDsPGTDHFVIIAQLK (E) S(0.0)KFES(0.0)IT(0.0)T(0.0)NGDS(0.0)FS(0.0)PDLALDS(0.99)PGT(0.0)DHFVIIAQLK K:TMT10,s:Phosphorylated S FAM76A 39536.4 2 2 3566.1 48.06 HUMAN 1 -12.1165 19.4415 SPDLWKLSPDQRKTS-p Q96JM3;S452-p SPDLWKLSPDQRKTS 0.258652172886028 0.0290661507981743 -0.197333333333333 -0.378666666666667 11.1608203617897 20.8020183112037 -0.197333333333333 -0.378666666666667 0.0765452002981622 0.0083137731256337 -2.18430795872459 -4.0492410426178 Q96JM3 CHAMP1 Q96JM3.S452.p_CHAMP1 Q96JM3_S452s _1_1_452_452 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17471.17471.5 14.34 8.45 5.824 5 1 1 0 695.3781 3392.8894 S452s TMT10 432 (R) SPAGSPELRKPSGSPDLWKLsPDQR (K) S(0.0)PAGS(0.0)PELRKPS(0.0)GS(0.0)PDLWKLS(0.99)PDQR K:TMT10,s:Phosphorylated S CHAMP1 90067.4 11 25 25.1 950.05 HUMAN 1 -11.1608 -20.802 SPDMHEDT_______-p Q9BW61;T102-p SPDMHEDT_______ 0.516320631708658 0.129559588823096 0.228666666666667 0.241 5.30136641159012 11.6986471410435 0.228666666666667 0.241 0.295028083997308 0.0676293612971033 1.15900946359597 2.27789109006301 Q9BW61 DDA1 Q9BW61.T102.p_DDA1 Q9BW61_T102t _1_1_102_102 Q9BW61 Q9BW61 DET1- and DDB1-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5982.5982.2 14.62 14.62 3.839 3 1 1 0 891.8822 1702.7904 T102t TMT10 90 (K) VARTDSPDMHEDt (-) VART(0.0)DS(0.0)PDMHEDT(0.99) t:Phosphorylated T DDA1 11892.1 2 3 3061.1 61.74 HUMAN 1 5.3014 11.6986 SPDNPRRSPPGAGGS-p P78415;S365-p SPDNPRRSPPGAGGS 0.576683296043079 0.00273807456007999 0.101666666666667 0.697666666666667 4.39795949834853 38.8435891769074 0.101666666666667 0.697666666666667 0.363248684486279 0.000130509186412548 0.992475737202333 9.62319567012441 P78415 IRX3 P78415.S365.p_IRX3 P78415_S365s _1_1_365_365 P78415 P78415 Iroquois-class homeodomain protein IRX-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25057.25057.4 27.9 21.44 1.108 8 1 1 0 1220.8781 4800.5131 S365s TMT10 349 (K) IWSLAETATSPDNPRRsPPGAGGSPPGAAVAPSALQLSPAAAAAAAHR (L) IWS(0.0)LAET(0.0)AT(0.0)S(0.0)PDNPRRS(0.99)PPGAGGS(0.0)PPGAAVAPS(0.0)ALQLS(0.0)PAAAAAAAHR s:Phosphorylated S IRX3 52232 1 3 2172.1 94.55 HUMAN 1 4.398 38.8436 SPDSRASSLSESSPP-p Q9UHB6-4;S370-p SPDSRASSLSESSPP 0.566232422546953 0.0920959110676995 -0.113666666666667 -0.317 4.54987993451715 13.7000018453621 -0.113666666666667 -0.317 0.350761571007677 0.0426579337543591 -1.02088490345996 -2.63646095340906 Q9UHB6 LIMA1 Q9UHB6.4.S370.p_LIMA1 Q9UHB6-4_S370s _1_1_370_370 Q9UHB6-4 Q9UHB6-4|Q9UHB6-5|Q9UHB6-2|F8VQE1|Q9UHB6-3|F8VS07|F8VRN8 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9780.9780.2 12.87 8.59 1.101 5 1 1 0 814.4199 1547.8681 S370s TMT10 368 (R) ASsLSESSPPK (A) AS(0.0)S(0.99)LS(0.0)ES(0.0)S(0.0)PPK K:TMT10,s:Phosphorylated S LIMA1 85678.4 5 17 42.1 822.82 HUMAN 1 -4.5499 -13.7 SPDTKQASPLISPLL-p Q9Y4F1-2;S510-p SPDTKQASPLISPLL 0.167853660719156 0.171911565537946 -0.239666666666667 0.173333333333333 15.4735894050199 10.0526837249751 -0.239666666666667 0.173333333333333 0.0283557448277277 0.0987942406472803 -2.96775420314816 1.99005539132213 Q9Y4F1 FARP1 Q9Y4F1.2.S510.p_FARP1 Q9Y4F1-2_S510s _1_1_510_510 Q9Y4F1-2 Q9Y4F1-2|C9JME2 Isoform 2 of FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24236.24236.3 18.9 18.9 5.288 2 1 1 0 730.3706 2109.1324 S510s TMT10 508 (K) QAsPLISPLLNDQACPR (T) QAS(0.99)PLIS(0.0)PLLNDQACPR C:Carbamidomethylation,s:Phosphorylated S FARP1 122909.6 2 33 147.2 514.5 HUMAN 1 -15.4736 10.0527 SPDVIVLSDNEQPSS-p Q86YP4-3;S107-p SPDVIVLSDNEQPSS 0.263054148508799 0.0511642402924895 0.257 -0.266666666666667 10.999268006511 17.2365543457978 0.257 -0.266666666666667 0.0794462128228209 0.0188948985919241 2.15598110547276 -3.30680867274486 Q86YP4 GATAD2A Q86YP4.3.S107.p_GATAD2A Q86YP4-3_S107s _1_1_107_107 Q86YP4-3 Q86YP4-3|Q86YP4-2 Isoform 3 of Transcriptional repressor p66-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15576.15576.3 11.6 5.84 2.371 4 1 1 0 833.7544 2419.2779 S107s TMT10 97 (R) RPPSPDVIVLsDNEQPSSPR (V) RPPS(0.0)PDVIVLS(0.99)DNEQPS(0.0)S(0.0)PR s:Phosphorylated S GATAD2A 68475 1 5 1046.1 184.48 HUMAN 1 10.9993 -17.2366 SPEAPAHSPKAKAAD-p A7MBM2;S1270-p SPEAPAHSPKAKAAD 0.883910399642057 0.70685056850881 -0.0226666666666667 0.0448333333333334 1.05814018207871 2.07022729294355 -0.0226666666666667 0.0448333333333333 0.783765209662593 0.620836541195158 -0.288399363151425 0.524237153788833 A7MBM2 DISP2 A7MBM2.S1270.p_DISP2 A7MBM2_S1252sS1270s_2_2_1252_1270 A7MBM2 A7MBM2 Protein dispatched homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12403.12403.3 15.66 15.66 4.976 3 2 2 0 921.0718 2601.263 S1252s S1270s Hydrogen 1250 (R) QDsQGEEAEPLPASPEAPAHsPK (A) QDS(0.99)QGEEAEPLPAS(0.0)PEAPAHS(0.99)PK K:TMT10-Lys-Only,s:Phosphorylated S DISP2 154339.7 1 4 2793.1 70.42 HUMAN 2 -1.0581 2.0702 SPEDLGLSLTGDSCK-p Q12888-2;S512-p SPEDLGLSLTGDSCK 0.375099103740569 0.710239341293021 -0.227 -0.065 7.88276310484761 2.0432169966983 -0.227 -0.065 0.162825975791512 0.62470977328784 -1.61481636399302 -0.51829096698984 Q12888 TP53BP1 Q12888.2.S512.p_TP53BP1 Q12888-2_S512s _1_1_512_512 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21331.21331.2 17.57 17.57 2.287 4 1 1 0 1116.0373 2151.1004 S512s TMT10 504 (K) NSPEDLGLsLTGDSCK (L) NS(0.0)PEDLGLS(0.99)LT(0.0)GDS(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TP53BP1 216167.2 3 21 3.1 2297.07 HUMAN 1 -7.8828 -2.0432 SPEELLKSGGVNQYV-p Q15021;S20-p SPEELLKSGGVNQYV 0.137325721125408 0.0884572878726654 -0.427666666666667 0.236333333333333 17.6630760830052 13.9391423430893 -0.427666666666667 0.236333333333333 0.0171274375116715 0.0403725113862217 -3.39439652058513 2.68015240988966 Q15021 NCAPD2 Q15021.S20.p_NCAPD2 Q15021_S20s _1_1_20_20 Q15021 Q15021|F5H431 Condensin complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.33983.33983.3 19.57 19.57 8.829 3 1 1 0 753.412 2178.2534 S20s TMT10 20 (K) sGGVNQYVVQEVLSIK (H) S(0.99)GGVNQY(0.0)VVQEVLS(0.0)IK K:TMT10,s:Phosphorylated S NCAPD2 158605.7 1 2 1192.1 168.06 HUMAN 1 -17.6631 13.9391 SPEEVVASPRASPAK-p Q13049;S335-p SPEEVVASPRASPAK 0.380643803112374 0.118718866067321 0.118 -0.382 7.7492701300142 12.2031914645442 0.118 -0.382 0.167908617957835 0.0602116950668956 1.5916332284547 -2.36722301865776 Q13049 TRIM32 Q13049.S335.p_TRIM32 Q13049_S335s _1_1_335_335 Q13049 Q13049 E3 ubiquitin-protein ligase TRIM32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17957.17957.3 10.22 10.22 4.408 2 1 1 0 629.2817 1805.8611 S335s TMT10 324 (R) EMDMSPEEVVAsPR (A) EMDMS(0.0)PEEVVAS(0.99)PR s:Phosphorylated S TRIM32 73584.8 3 4 2980.1 64.18 HUMAN 1 7.7493 -12.2032 SPEFSEASPQMSLKL-p Q96PY6-3;S909-p SPEFSEASPQMSLKL 0.451823780329444 0.137719337204373 -0.137 0.198333333333333 6.36895598108382 11.3470048326424 -0.137 0.198333333333333 0.23073017841139 0.0733330109255463 -1.35003419000918 2.21598147354125 Q96PY6 NEK1 Q96PY6.3.S909.p_NEK1 Q96PY6-3_S909s _1_1_909_909 Q96PY6-3 Q96PY6-3|Q96PY6-6|Q96PY6-2|Q96PY6-4 Isoform 3 of Serine/threonine-protein kinase Nek1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19422.19422.3 10.23 10.23 3.32 4 1 1 0 692.675 1996.0462 S909s TMT10 902 (K) SPEFSEAsPQMSLK (L) S(0.0)PEFS(0.0)EAS(0.99)PQMS(0.0)LK K:TMT10,s:Phosphorylated S NEK1 146666.9 1 6 1537.1 133.31 HUMAN 1 -6.369 11.347 SPEGARGSEGRVEPK-p Q7Z2K8;S744-p SPEGARGSEGRVEPK 0.0408130310723349 0.0478179133663351 -0.619333333333333 -0.483333333333333 30.9974521241404 17.6618425036599 -0.619333333333333 -0.483333333333333 0.000794794380070436 0.0171323031166805 -6.74143526067026 -3.39143819699446 Q7Z2K8 GPRIN1 Q7Z2K8.S744.p_GPRIN1 Q7Z2K8_S744s _1_1_744_744 Q7Z2K8 Q7Z2K8 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4817.4817.4 9.22 9.22 2.108 2 1 1 0 524.275 2014.1082 S744s TMT10 737 (R) SPEGARGsEGRVEPK (A) S(0.0)PEGARGS(0.99)EGRVEPK K:TMT10,s:Phosphorylated S GPRIN1 103196.3 1 19 292.1 381.4 HUMAN 1 -30.9975 -17.6618 SPEGGEDSDREDGNY-p Q9H6Z4-3;S40-p SPEGGEDSDREDGNY 0.206446708127283 0.529521161134576 0.269333333333333 0.062 13.2491661428901 3.71272566283494 0.269333333333333 0.062 0.0473242114000315 0.425331388366493 2.55606377679449 0.861664070626971 Q9H6Z4 RANBP3 Q9H6Z4.3.S40.p_RANBP3 Q9H6Z4-3_S40s _1_1_40_40 Q9H6Z4-3 Q9H6Z4-3|B7Z7F3|K7ENB9|K7EID7 Isoform 3 of Ran-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5696.5696.4 15.99 10.49 5.193 5 1 1 0 855.1437 3337.5868 S40s TMT10 27 (K) RSAGGSSPEGGEDsDREDGNYCPPVKR (E) RS(0.0)AGGS(0.0)S(0.0)PEGGEDS(0.99)DREDGNY(0.0)CPPVKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RANBP3 53752.1 4 5 444.1 311.24 HUMAN 1 13.2492 3.7127 SPEKEAPSPEKTLPP-p Q13459;S1122-p SPEKEAPSPEKTLPP 0.743332697084522 0.0282190566693468 0.119 -0.286666666666667 2.44681507227698 20.9966869162317 0.119 -0.286666666666667 0.569270255962909 0.00794934431706724 0.605626634256838 -4.09211543241795 Q13459 MYO9B Q13459.S1122.p_MYO9B Q13459_S1122s _1_1_1122_1122 Q13459 Q13459 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7207.7207.2 9.42 9.42 99 1 1 1 0 648.3362 1215.6985 S1122s TMT10 1119 (K) EAPsPEK (T) EAPS(1.0)PEK K:TMT10,s:Phosphorylated S MYO9B 244993.9 1 4 211.1 438.12 HUMAN 1 2.4468 -20.9967 SPEKFQPSPLKVDKE-p Q9ULE0;S863-p SPEKFQPSPLKVDKE 0.3457146199102 0.133601238594811 -0.211 -0.291333333333333 8.5714000346586 11.5238860611169 -0.211 -0.291333333333333 0.138950462454753 0.0704062792594821 -1.73416918996421 -2.24708926686032 Q9ULE0 WWC3 Q9ULE0.S863.p_WWC3 Q9ULE0_S863s _1_1_863_863 Q9ULE0 Q9ULE0 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.35299.35299.4 21.04 21.04 1.141 4 1 1 0 1012.056 3965.2293 S863s TMT10 860 (K) FQPsPLKVDKETNTEDLFLEEAASLVK (E) FQPS(0.99)PLKVDKET(0.0)NT(0.0)EDLFLEEAAS(0.0)LVK K:TMT10,s:Phosphorylated S WWC3 123814.7 5 21 161.1 495.35 HUMAN 1 -8.5714 -11.5239 SPEKQPGSPSPPSIP-p Q96PM9;S160-p SPEKQPGSPSPPSIP 0.495936187342339 0.00568315877546512 -0.129 0.899333333333333 5.60696898691686 32.5355143356405 -0.129 0.899333333333333 0.27498126233092 0.000557761542442033 -1.21421750717669 7.22946965662021 Q96PM9 ZNF385A Q96PM9.S160.p_ZNF385A Q96PM9_S160s _1_1_160_160 Q96PM9 Q96PM9|Q96PM9-1 Zinc finger protein 385A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16864.16864.4 17.93 17.93 1.232 8 1 1 0 1217.8816 4788.5349 S160s TMT10 157 (K) QPGsPSPPSIPETGQGVTKGEGGTPAPASLPGGSKEEEEK (A) QPGS(0.99)PS(0.0)PPS(0.0)IPET(0.0)GQGVT(0.0)KGEGGT(0.0)PAPAS(0.0)LPGGS(0.0)KEEEEK K:TMT10,s:Phosphorylated S ZNF385A 40795.3 4 2 2280.1 89.83 HUMAN 1 -5.607 32.5355 SPEKRSPSAPVCKAG-p Q6P1L5;S194-p SPEKRSPSAPVCKAG 0.0805026402883235 0.419944067712415 0.747 -0.170666666666667 23.3610713783818 5.01644880052687 0.747 -0.170666666666667 0.00461203784323937 0.315032326130259 4.6403069723869 -1.10684725760458 Q6P1L5 FAM117B Q6P1L5.S194.p_FAM117B Q6P1L5_S194s _1_1_194_194 Q6P1L5 Q6P1L5|Q6P1L5-2 Protein FAM117B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8878.8878.3 8.44 8.44 1.151 2 1 1 0 461.9079 1303.7444 S194s TMT10 192 (R) SPsAPVCK (A) S(0.0)PS(0.99)APVCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM117B 62537.3 2 4 492.1 293.79 HUMAN 1 23.3611 -5.0164 SPELRQKSPLFQFAE-p Q8WY36;S243-p SPELRQKSPLFQFAE 0.823567086658555 0.0237558606994797 0.0396666666666666 -0.316 1.62478648738426 22.1510229738937 0.0396666666666667 -0.316 0.687893730463431 0.00609393338680732 0.424006136808167 -4.35190731220966 Q8WY36 BBX Q8WY36.S243.p_BBX Q8WY36_S243s _1_1_243_243 Q8WY36 Q8WY36|Q8WY36-2|C9JA69|Q8WY36-3 HMG box transcription factor BBX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20953.20953.4 15.67 15.67 3.84 9 1 1 0 813.4243 3170.6937 S243s TMT10 241 (R) QKsPLFQFAEISSSTSHSDASTK (Q) QKS(0.99)PLFQFAEIS(0.0)S(0.0)S(0.0)T(0.0)S(0.0)HS(0.0)DAS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S BBX 106212.3 1 3 621.1 259.66 HUMAN 1 1.6248 -22.151 SPEPEVLSTQEDLFD-p Q12888-2;S306-p SPEPEVLSTQEDLFD 0.207244478183162 0.0173615564197841 -0.237666666666667 0.345333333333333 13.2111086583053 24.2722775140433 -0.237666666666667 0.345333333333333 0.0477407386493835 0.00373914449757656 -2.54917808104493 4.85596477726585 Q12888 TP53BP1 Q12888.2.S306.p_TP53BP1 Q12888-2_S306sT307t_2_2_306_307 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25301.25301.3 8.8 8.8 8.8 4 2 2 0 927.7603 2621.3347 S306s T307t TMT10 299 (K) SPEPEVLstQEDLFDQSNK (T) S(0.0)PEPEVLS(0.99)T(0.99)QEDLFDQS(0.0)NK K:TMT10,s:Phosphorylated S,t:Phosphorylated T TP53BP1 216167.2 1 84 3.1 2297.07 HUMAN 1 -13.2111 24.2723 SPEPKAITPPQQPYK-p Q9NYV4-2;T692-p SPEPKAITPPQQPYK 0.785321801685938 0.0320849526179946 -0.0586666666666667 0.272666666666667 2.02163696566069 20.1578050660633 -0.0586666666666667 0.272666666666667 0.627821672354441 0.00964316268065451 -0.513588387100367 3.90920427142082 Q9NYV4 CDK12 Q9NYV4.2.T692.p_CDK12 Q9NYV4-2_T692t _1_1_692_692 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15030.15441.2 14.76 9.88 7.845 2 1 1 0 840.9597 1600.9463 T692t TMT10 690 (K) AItPPQQPYK (K) AIT(0.99)PPQQPY(0.0)K K:TMT10,t:Phosphorylated T CDK12 163853.1 6 25 59.1 708.76 HUMAN 1 -2.0216 20.1578 SPEPRKPSPSESPEP-p Q96JM3;S282-p SPEPRKPSPSESPEP 0.253566244688488 0.0101895633915288 0.218 0.502333333333333 11.3483866675434 27.9773892685541 0.218 0.502333333333333 0.0733096815951905 0.00159316616013874 2.21726013877656 5.83114411701244 Q96JM3 CHAMP1 Q96JM3.S282.p_CHAMP1 Q96JM3_S282s _1_1_282_282 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20543.20543.3 16.96 14.03 1.414 4 1 1 0 1071.9052 3133.7289 S282s TMT10 280 (R) KPsPSESPEPWKPFPAVSPEPR (R) KPS(0.99)PS(0.0)ES(0.0)PEPWKPFPAVS(0.0)PEPR K:TMT10,s:Phosphorylated S CHAMP1 90067.4 12 10 25.1 950.05 HUMAN 1 11.3484 27.9774 SPERCSDSDEEKKAR-p Q14677-3;S234-p SPERCSDSDEEKKAR 0.265496929072473 0.191764256097797 -0.190333333333333 0.209 10.9187141153142 9.43118195845176 -0.190333333333333 0.209 0.0809335496527443 0.113993950397475 -2.14187472268693 1.88231990650611 Q14677 CLINT1 Q14677.3.S234.p_CLINT1 Q14677-3_S227sS232sS234s_3_3_227_234 Q14677-3 Q14677-3 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4600.4600.5 7.21 7.21 99 3 3 3 0 633.8773 2925.4575 S227s S232s S234s TMT10 221 (R) RKDREDsPERCsDsDEEK (K) RKDREDS(1.0)PERCS(1.0)DS(1.0)DEEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CLINT1 70350.7 7 25 632.1 256.73 HUMAN 1 -10.9187 9.4312 SPERRCRSVELDLNQ-p Q14680;S505-p SPERRCRSVELDLNQ 0.494616239203626 0.00385233994224125 0.0953333333333333 -0.616 5.63061924897212 35.7077334845693 0.0953333333333333 -0.616 0.273487873940487 0.000268674625096461 1.21847032328509 -8.35843900884017 Q14680 MELK Q14680.S505.p_MELK Q14680_S505s _1_1_505_505 Q14680 Q14680|Q14680-6|Q14680-7|Q14680-8|Q14680-2|Q14680-5|Q14680-4|Q14680-3 Maternal embryonic leucine zipper kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18308.18308.3 21.99 21.99 14.776 2 1 1 0 793.7286 2299.2004 S505s TMT10 505 (R) sVELDLNQAHMEETPK (R) S(0.99)VELDLNQAHMEET(0.0)PK K:TMT10,s:Phosphorylated S MELK 75553.6 12 6 1543.1 132.89 HUMAN 1 5.6306 -35.7077 SPESKPQTPSQTKVE-p A6NHB5;T783-p SPESKPQTPSQTKVE 0.177952811715001 0.750294480763877 -0.263 0.0523333333333333 14.8300428775567 1.7243974471248 -0.263 0.0523333333333333 0.0328848384165413 0.672295578897459 -2.84663593662189 0.446814912237926 A6NHB5 NotFound A6NHB5.T783.p_NotFound A6NHB5_T783t _1_1_783_783 A6NHB5 A6NHB5 Zinc finger MYM-type protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21734.21734.5 19.11 19.11 1.789 11 1 1 0 952.4692 4678.384 T783t TMT10 753 (R) FYSQQNQPNLDTQSGPESLLNSQSPESKPQtPSQTK (V) FY(0.0)S(0.0)QQNQPNLDT(0.0)QS(0.0)GPES(0.0)LLNS(0.0)QS(0.0)PES(0.0)KPQT(0.99)PS(0.0)QT(0.0)K K:TMT10,t:Phosphorylated T ZMYM3 156426.3 1 8 331.1 357.99 HUMAN 1 -14.83 1.7244 SPEVFDESLPANTPL-p Q69YH5;S407-p SPEVFDESLPANTPL 0.424271411026919 0.250441300337034 0.116666666666667 0.139333333333333 6.86298635962211 7.92327163129159 0.116666666666667 0.139333333333333 0.205921343967126 0.161314288466735 1.43700773824571 1.62133869334617 Q69YH5 CDCA2 Q69YH5.S407.p_CDCA2 Q69YH5_S407s _1_1_407_407 Q69YH5 Q69YH5|E9PEI0 Cell division cycle-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32069.32069.3 10.3 10.51 2.526 4 1 1 0 948.1338 2762.4086 S407s TMT10 393 (R) VTFGEDLSPEVFDEsLPANTPLR (K) VT(0.0)FGEDLS(0.0)PEVFDES(0.99)LPANT(0.0)PLR s:Phosphorylated S CDCA2 114214.8 1 8 407.1 324.13 HUMAN 1 6.863 7.9233 SPFFRNNSEKMSMED-p Q6PJT7;S281-p SPFFRNNSEKMSMED 0.538659416854896 0.139447123803519 -0.103666666666667 0.218333333333333 4.96704974372703 11.272878407806 -0.103666666666667 0.218333333333333 0.318636135080252 0.0745954192588302 -1.09801631003815 2.20296434558398 Q6PJT7 ZC3H14 Q6PJT7.S281.p_ZC3H14 Q6PJT7_S281s _1_1_281_281 Q6PJT7 Q6PJT7|Q6PJT7-2|Q6PJT7-9|Q6PJT7-5|G3V256|Q6PJT7-11|Q6PJT7-3|Q6PJT7-4|Q6PJT7-10|G3V5I6 Zinc finger CCCH domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.33136.33136.4 17.55 16.12 1.175 5 1 1 0 860.9167 3360.6822 S281s TMT10 260 (R) LCEPEVLNSLEETYSPFFRNNsEK (M) LCEPEVLNS(0.0)LEET(0.0)Y(0.0)S(0.0)PFFRNNS(0.99)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZC3H14 83844.1 1 6 420.1 320.31 HUMAN 1 -4.967 11.2729 SPFGLRTSPYGSSLD-p J3KNZ9;S340-p SPFGLRTSPYGSSLD 0.433169253377701 0.0121085157327048 -0.196333333333333 0.482 6.69206195644564 26.7736768796967 -0.196333333333333 0.482 0.214187343454029 0.0021019980656238 -1.40699513917879 5.49997339721649 J3KNZ9 FBRS J3KNZ9.S340.p_FBRS J3KNZ9_S340s _1_1_340_340 J3KNZ9 J3KNZ9 Probable fibrosin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14973.15307.3 10.89 7.14 1.158 10 1 1 0 887.1186 2579.3717 S340s TMT10 339 (R) TsPYGSSLDLSTGSSSRPPPK (A) T(0.0)S(0.99)PY(0.0)GS(0.0)S(0.0)LDLS(0.0)T(0.0)GS(0.0)S(0.0)S(0.0)RPPPK K:TMT10,s:Phosphorylated S FBRS 104109.7 5 5 767.1 229.08 HUMAN 1 -6.6921 26.7737 SPFKRQLSLRINELP-p P49757;S295-p SPFKRQLSLRINELP 0.176872821059086 0.0704347276970444 0.478666666666667 -0.850666666666667 14.9186021881714 15.3208113593982 0.478666666666667 -0.850666666666667 0.0322210568511862 0.0293710088444956 2.86319884056002 -2.93687205769298 P49757 NUMB P49757.S295.p_NUMB P49757_S295s _1_1_295_295 P49757 P49757|P49757-3|P49757-2|P49757-4|G3V3Z8|P49757-9 Protein numb homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22255.22255.3 13.27 13.27 6.671 3 1 1 0 699.0355 2015.1269 S295s TMT10 293 (R) QLsLRINELPSTMQR (K) QLS(0.99)LRINELPS(0.0)T(0.0)MQR s:Phosphorylated S NUMB 71487.2 3 4 538.1 277.23 HUMAN 1 14.9186 -15.3208 SPFKRQLSLRLNELP-p Q9Y6R0;S324-p SPFKRQLSLRLNELP 0.787828576236821 0.058577210307933 0.0546666666666667 -0.296 1.99882332765046 16.4117473257468 0.0546666666666667 -0.296 0.631128318479997 0.0228467940823983 0.508541442068074 -3.1453609755519 Q9Y6R0 NUMBL Q9Y6R0.S324.p_NUMBL Q9Y6R0_S324s _1_1_324_324 Q9Y6R0 Q9Y6R0|A0A0C4DGH3 Numb-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24135.24135.3 13.54 13.54 7.442 3 1 1 0 693.051 1997.1705 S324s TMT10 322 (R) QLsLRLNELPSTLQR (R) QLS(0.99)LRLNELPS(0.0)T(0.0)LQR s:Phosphorylated S NUMBL 65632 5 19 538.2 277.23 HUMAN 1 1.9988 -16.4117 SPFMDRSSPQLAKLQ-p Q13370;S981-p SPFMDRSSPQLAKLQ 0.217126583342706 0.0170588165373361 0.186 -0.617666666666667 12.7806737283414 24.3917767783115 0.186 -0.617666666666667 0.0527148077710587 0.00363766182268552 2.47161959636215 -4.88545845959606 Q13370 PDE3B Q13370.S981.p_PDE3B Q13370_S981s _1_1_981_981 Q13370 Q13370|Q13370-2 cGMP-inhibited 3',5'-cyclic phosphodiesterase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8872.8872.2 7.81 1.02 1.369 2 1 1 0 634.8536 1188.7352 S981s TMT10 980 (R) SsPQLAK (L) S(0.0)S(0.99)PQLAK K:TMT10,s:Phosphorylated S PDE3B 126156.9 1 1 6261.1 12.75 HUMAN 1 12.7807 -24.3918 SPFPEDDSEGLHSDS-p Q99549-2;S279-p SPFPEDDSEGLHSDS 0.90889998374688 0.0446324213090108 0.02 0.242666666666667 0.814899465625148 18.0732328863021 0.02 0.242666666666667 0.828915104519968 0.0155839200458862 0.226780924221858 3.47424251555274 Q99549 MPHOSPH8 Q99549.2.S279.p_MPHOSPH8 Q99549-2_S279s_1_1_279_279 Q99549-2 Q99549-2 Isoform 2 of M-phase phosphoprotein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22555.22555.5 23.69 22.97 3.352 8 1 1 0 870.7976 4268.9995 N270n S279s TMT10 257 (K) FVESQVESESSVLnDSPFPEDDsEGLHSDSREEK (Q) FVES(0.0)QVES(0.0)ES(0.0)S(0.0)VLN(1.0)DS(0.0)PFPEDDS(0.99)EGLHS(0.0)DS(0.0)REEK K:TMT10,n:Deamidated,s:Phosphorylated S MPHOSPH8 98148.4 2 11 242.1 413.34 HUMAN 1 0.8149 18.0732 SPFRKDKSPVREPID-p Q14498;S136-p SPFRKDKSPVREPID 0.247048592039774 0.877040912112307 0.175 -0.0163333333333333 11.6040204163239 0.800858726970002 0.175 -0.0163333333333333 0.0691190815080063 0.831599323382863 2.26228927541379 -0.223130442797431 Q14498 RBM39 Q14498.S136.p_RBM39 Q14498_S136s _1_1_136_136 Q14498 Q14498|Q14498-2|Q14498-3|G3XAC6 RNA-binding protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10846.11055.4 16.93 9.96 4.094 2 1 1 0 719.6259 2795.5052 S136s TMT10 134 (K) DKsPVREPIDNLTPEERDAR (T) DKS(0.99)PVREPIDNLT(0.0)PEERDAR K:TMT10,s:Phosphorylated S RBM39 59663.8 32 6 915.1 200.83 HUMAN 1 11.604 -0.8009 SPFRKQGSDSEARQV-p P56181-2;S137-p SPFRKQGSDSEARQV 0.288913155686021 0.6684220242286 0.455 0.115 10.1698690060359 2.39445523807557 0.455 0.115 0.0961641283427299 0.576175087165 2.01123857524118 0.594413127665082 P56181 NDUFV3 P56181.2.S137.p_NDUFV3 P56181-2_S137s _1_1_137_137 P56181-2 P56181-2 Isoform 2 of NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3220.3220.2 7.69 3.16 1.77 2 1 1 0 758.3819 1435.7905 S137s TMT10 134 (R) KQGsDSEAR (Q) KQGS(0.99)DS(0.0)EAR K:TMT10,s:Phosphorylated S NDUFV3 51040.2 2 4 1273.1 159.36 HUMAN 1 10.1699 2.3945 SPFSMAASPKLAASP-p Q6ZU65;S1036-p SPFSMAASPKLAASP 0.296452199456317 0.460503117901934 0.152666666666667 -0.0716666666666666 9.94544982820968 4.49088977843695 0.152666666666667 -0.0716666666666667 0.101263985741383 0.355558464623354 1.97223475711636 -1.00968858632169 Q6ZU65 UBN2 Q6ZU65.S1036.p_UBN2 Q6ZU65_S1036s _1_1_1036_1036 Q6ZU65 Q6ZU65 Ubinuclein-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18621.18621.3 10.09 7.89 5.349 3 1 1 0 520.9349 1480.8234 S1036s TMT10 1029 (K) SPFSMAAsPK (L) S(0.0)PFS(0.0)MAAS(0.99)PK K:TMT10,s:Phosphorylated S UBN2 146713.5 1 8 1034.1 185.79 HUMAN 1 9.9454 -4.4909 SPFYRAASGNEALGM-p B2RTY4-5;S2228-p SPFYRAASGNEALGM 0.844969416413235 0.10277086008095 -0.032 -0.224333333333333 1.41306200453511 13.0515714690623 -0.032 -0.224333333333333 0.722260392475061 0.0495270947495693 -0.374505655188475 -2.51897536637762 B2RTY4 MYO9A B2RTY4.5.S2228.p_MYO9A B2RTY4-5_S2228s _1_1_2228_2228 B2RTY4-5 B2RTY4-4|B2RTY4-2|B2RTY4-5 Isoform 5 of Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19834.19834.3 20.59 20.59 20.589 2 1 1 0 757.0485 2189.1636 S2228s TMT10 2226 (R) AAsGNEALGMEGPLGQTK (F) AAS(0.99)GNEALGMEGPLGQT(0.0)K K:TMT10,s:Phosphorylated S MYO9A 267577.4 1 19 457.1 306.95 HUMAN 1 -1.4131 -13.0516 SPGAMRRSLPSTSST-p Q12857-2;S265-p SPGAMRRSLPSTSST 0.285875157174419 0.111959558647563 -0.269 -0.257333333333333 10.262174530037 12.5512906620377 -0.269 -0.257333333333333 0.094141810664046 0.0555739074900201 -2.02729821018164 -2.42923928088339 Q12857 NFIA Q12857.2.S265.p_NFIA Q12857-2_S265s _1_1_265_265 Q12857-2 Q12857-4|B1AKN8|Q12857-3|Q12857-2|B1AKN5 Isoform 2 of Nuclear factor 1 A-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9661.9661.3 8.58 8.58 3.702 9 1 1 0 574.2956 1640.9107 S265s TMT10 265 (R) sLPSTSSTSSTK (R) S(0.99)LPS(0.0)T(0.0)S(0.0)S(0.0)T(0.0)S(0.0)S(0.0)T(0.0)K K:TMT10,s:Phosphorylated S NFIA 55018.3 1 5 555.1 273.2 HUMAN 1 -10.2622 -12.5513 SPGCDRRSPTLSKEE-p Q6ZMY3;S181-p SPGCDRRSPTLSKEE 0.987119537498625 0.00274191631715344 0.00266666666666666 0.676666666666667 0.113917529407583 38.8200220631781 0.00266666666666667 0.676666666666667 0.974110550242749 0.000131219323275294 0.0339810192201646 9.61308446283868 Q6ZMY3 SPOCD1 Q6ZMY3.S181.p_SPOCD1 Q6ZMY3_S181s _1_1_181_181 Q6ZMY3 Q6ZMY3|Q6ZMY3-2|Q6ZMY3-5 SPOC domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7390.7390.4 13.75 13.75 2.518 5 1 1 0 612.2958 2366.1957 S181s TMT10 169 (R) DGGMSSPGCDRRsPTLSK (E) DGGMS(0.0)S(0.0)PGCDRRS(0.99)PT(0.0)LS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SPOCD1 132021.7 5 2 2060.1 100.05 HUMAN 1 0.1139 38.82 SPGDLTRSPEMDKLK-p O43149;S240-p SPGDLTRSPEMDKLK 0.182164595842396 0.44001827838499 -0.270333333333333 0.0866666666666667 14.5513394180891 4.74885091859276 -0.270333333333333 0.0866666666666667 0.0350643714400655 0.335054077972873 -2.79472037046302 1.05762131879755 O43149 ZZEF1 O43149.S240.p_ZZEF1 O43149_S240s _1_1_240_240 O43149 O43149|O43149-3 Zinc finger ZZ-type and EF-hand domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11733.11733.3 15.51 10.63 2.386 3 1 1 0 700.6752 2020.0421 S240s TMT10 232 (K) ESPGDLTRsPEMDK (L) ES(0.0)PGDLT(0.0)RS(0.99)PEMDK K:TMT10,s:Phosphorylated S ZZEF1 335976 2 1 1481.1 138.54 HUMAN 1 -14.5513 4.7489 SPGGGGGSDYNYESK-p Q12906-7;S803-p SPGGGGGSDYNYESK 0.176248051565946 0.166565653829041 0.508666666666667 0.299 14.9707580495008 10.2374774724517 0.508666666666666 0.299 0.0318364177699638 0.0946786927190332 2.87296861697116 2.0221605622913 Q12906 ILF3 Q12906.7.S803.p_ILF3 Q12906-7_S803s _1_1_803_803 Q12906-7 Q12906-7 Isoform 7 of Interleukin enhancer-binding factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11311.11311.3 25.15 25.15 1.179 13 1 1 0 1264.5367 3711.626 S803s TMT10 780 (K) GYNHGQGSYSYSNSYNSPGGGGGsDYNYESK (F) GY(0.0)NHGQGS(0.0)Y(0.0)S(0.0)Y(0.0)S(0.0)NS(0.0)Y(0.0)NS(0.0)PGGGGGS(0.99)DY(0.0)NY(0.0)ES(0.0)K K:TMT10,s:Phosphorylated S ILF3 96205.6 2 16 130.1 537.24 HUMAN 1 14.9708 10.2375 SPGGPGDSQGRKRRQ-p P38936;S137-p SPGGPGDSQGRKRRQ 0.21748648630311 0.0284058958503704 -0.318 -0.459333333333333 12.7635027448049 20.9488640836661 -0.318 -0.459333333333333 0.0529236423061163 0.00803736315467077 -2.46853743839824 -4.0815583711809 P38936 CDKN1A P38936.S137.p_CDKN1A P38936_S130sS137s_2_2_130_137 P38936 P38936 Cyclin-dependent kinase inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5525.5525.3 11.01 6.86 4.551 3 2 2 0 807.0283 2259.1366 S130s S137s TMT10 123 (R) SGEQAEGsPGGPGDsQGRK (R) S(0.0)GEQAEGS(0.99)PGGPGDS(0.99)QGRK K:TMT10,s:Phosphorylated S CDKN1A 18404.3 1 2 4068.1 38.22 HUMAN 1 -12.7635 -20.9489 SPGGPQLSPQLPRNS-p Q9HCH0;S473-p SPGGPQLSPQLPRNS 0.885069082704287 0.815275302401439 0.0256666666666667 0.0263333333333334 1.04849532380249 1.24057680663119 0.0256666666666667 0.0263333333333334 0.785507738014563 0.751523074126758 0.285999118842497 0.333147619194392 Q9HCH0 NCKAP5L Q9HCH0.S473.p_NCKAP5L Q9HCH0_S473s _1_1_473_473 Q9HCH0 Q9HCH0|Q9HCH0-3|Q9HCH0-2 Nck-associated protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15728.15728.2 16.26 13.15 5.115 3 1 1 0 913.9705 1746.97 S473s TMT10 464 (K) SPSPGGPQLsPQLPR (N) S(0.0)PS(0.0)PGGPQLS(0.99)PQLPR s:Phosphorylated S NCKAP5L 140323.1 4 5 609.1 261.98 HUMAN 1 1.0485 1.2406 SPGGRRESNGDSRGN-p O00423-3;S166-p SPGGRRESNGDSRGN 0.833590990786788 0.0409050773523274 0.118 0.877 1.52405051354166 18.6058070672557 0.118 0.877 0.704036132656434 0.0137853974946584 0.400614792088316 3.58286514288581 O00423 EML1 O00423.3.S166.p_EML1 O00423-3_S166s _1_1_166_166 O00423-3 O00423-3|F8W717 Isoform 3 of Echinoderm microtubule-associated protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.2753.2753.4 11.16 7.56 3.131 3 1 1 0 528.2584 2030.0437 S166s TMT10 158 (R) VSPGGRREsNGDSRGNR (N) VS(0.0)PGGRRES(0.99)NGDS(0.0)RGNR s:Phosphorylated S EML1 93010.7 1 1 6525.1 11.16 HUMAN 1 1.5241 18.6058 SPGGSEDSEAMEEGD-p Q6PIJ6;S760-p SPGGSEDSEAMEEGD 0.346046910908662 0.0275403203261996 0.131666666666667 0.467333333333333 8.56363219996804 21.1560033785509 0.131666666666667 0.467333333333333 0.139199213039033 0.00766301476137044 1.73282430056276 4.12740075063918 Q6PIJ6 FBXO38 Q6PIJ6.S760.p_FBXO38 Q6PIJ6_S757sS760s_2_2_757_760 Q6PIJ6 Q6PIJ6|Q6PIJ6-2 F-box only protein 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12739.12739.3 21.71 21.71 4.716 5 2 2 0 1097.7326 3131.2496 S757s S760s TMT10 749 (R) QCACSPGGsEDsEAMEEGDAESSVCPR (C) QCACS(0.0)PGGS(0.99)EDS(0.99)EAMEEGDAES(0.0)S(0.0)VCPR C:Carbamidomethylation,s:Phosphorylated S FBXO38 135824.2 3 7 2435.1 83.55 HUMAN 1 8.5636 21.156 SPGIRRGSENSSSEG-p O15068-9;S559-p SPGIRRGSENSSSEG 0.0825441086817992 0.279322164575744 -0.432333333333333 0.378333333333333 23.1488472032474 7.29832260326504 -0.432333333333333 0.378333333333333 0.00484300903966947 0.18628064785577 -4.5897032012048 1.51270263096825 O15068 MCF2L O15068.9.S559.p_MCF2L O15068-9_S559s _1_1_559_559 O15068-9 O15068|O15068-9|O15068-10|O15068-8|O15068-6|O15068-2 Isoform 7 of Guanine nucleotide exchange factor DBS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4252.4252.3 11.38 11.38 3.381 4 1 1 0 572.6022 1635.8248 S559s TMT10 557 (R) RGsENSSSEGGALR (R) RGS(0.99)ENS(0.0)S(0.0)S(0.0)EGGALR s:Phosphorylated S MCF2L 127771.1 1 4 2436.1 83.49 HUMAN 1 -23.1488 7.2983 SPGKEGHSPEGSTVT-p O75381;S282-p SPGKEGHSPEGSTVT 0.0922379394545988 0.00360190067498438 -0.639333333333333 0.652333333333333 22.0449276989473 36.3866180989705 -0.639333333333333 0.652333333333333 0.00624463746224335 0.000229793738180992 -4.33221068167012 8.61896294568268 O75381 PEX14 O75381.S282.p_PEX14 O75381_S282s _1_1_282_282 O75381 O75381|O75381-2 Peroxisomal membrane protein PEX14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19491.19491.4 25.14 24.43 2.258 5 1 1 0 872.9297 3408.7324 S282s TMT10 279 (K) EGHsPEGSTVTYHLLGPQEEGEGVVDVK (G) EGHS(0.99)PEGS(0.0)T(0.0)VT(0.0)Y(0.0)HLLGPQEEGEGVVDVK K:TMT10,s:Phosphorylated S PEX14 41292.9 1 5 1445.1 141.13 HUMAN 1 -22.0449 36.3866 SPGKENVSALDMEKE-p Q9H307;S450-p SPGKENVSALDMEKE 0.319460793173524 0.239465629874275 -0.317333333333333 0.134 9.27837434823037 8.17767250751474 -0.317333333333333 0.134 0.118076253615376 0.15213626474929 -1.85656213029456 1.66542845515349 Q9H307 PNN Q9H307.S450.p_PNN Q9H307_S450s _1_1_450_450 Q9H307 Q9H307|Q9H307-2 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17580.17580.3 8.29 8.29 99 1 1 1 0 558.6124 1593.8558 S450s TMT10 447 (K) ENVsALDMEK (E) ENVS(1.0)ALDMEK K:TMT10,s:Phosphorylated S PNN 81726.4 1 9 180.1 480.36 HUMAN 1 -9.2784 8.1777 SPGKLLGSGYGGLTG-p Q7Z460-4;S702-p SPGKLLGSGYGGLTG 0.471067248334803 0.338380521161699 -0.209 0.144 6.03540015142444 6.2350699250385 -0.209 0.144 0.249149479865618 0.237953998806694 -1.29086739249389 1.3260061652075 Q7Z460 CLASP1 Q7Z460.4.S702.p_CLASP1 Q7Z460-4_S702s _1_1_702_702 Q7Z460-4 Q7Z460-4|Q7Z460-2 Isoform 4 of CLIP-associating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20994.20994.3 9.63 9.63 2.307 5 1 1 0 564.2839 1610.87 S702s TMT10 699 (K) LLGsGYGGLTGGSSR (G) LLGS(0.99)GY(0.0)GGLT(0.0)GGS(0.0)S(0.0)R s:Phosphorylated S CLASP1 164028.5 1 44 158.3 498.15 HUMAN 1 -6.0354 6.2351 SPGKSKATPEKSLHD-p Q02880;T1431-p SPGKSKATPEKSLHD 0.259805946096148 0.133769740343171 0.339666666666667 -0.524 11.1036929125106 11.5166975864301 0.339666666666667 -0.524 0.0775587335218256 0.070522912758221 2.17428548030149 -2.24582373942455 Q02880 TOP2B Q02880.T1431.p_TOP2B Q02880_T1431t _1_1_1431_1431 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5681.5681.3 7.18 3.82 3.82 2 1 1 0 509.9635 1447.9087 T1431t TMT10 1428 (K) SKAtPEK (S) S(0.0)KAT(0.99)PEK K:TMT10,t:Phosphorylated T TOP2B 184233.7 1 36 71.1 658.36 HUMAN 1 11.1037 -11.5167 SPGLVPPSPEFAPRS-p Q9H5H4;S97-p SPGLVPPSPEFAPRS 0.602239550710979 0.0153321672161341 0.127333333333333 0.434 4.0680756251337 25.0987585659001 0.127333333333333 0.434 0.391915497841445 0.00309117892209484 0.93012014560977 5.06248167488372 Q9H5H4 ZNF768 Q9H5H4.S97.p_ZNF768 Q9H5H4_S97s _1_1_97_97 Q9H5H4 Q9H5H4|H3BS42 Zinc finger protein 768 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20570.20780.3 14.26 14.26 14.259 2 1 1 0 587.3039 1679.9318 S97s TMT10 90 (R) SPGLVPPsPEFAPR (S) S(0.0)PGLVPPS(0.99)PEFAPR s:Phosphorylated S ZNF768 61482.8 2 135 240.2 415.72 HUMAN 1 4.0681 25.0988 SPGPKQASFTDVRDP-p Q96RL7;S1416-p SPGPKQASFTDVRDP 0.883409430500239 0.0137691104908163 -0.0253333333333334 0.364333333333333 1.06350239822187 25.8515676656861 -0.0253333333333334 0.364333333333334 0.782798095144083 0.00259922115719933 -0.289732350374424 5.25588343927356 Q96RL7 VPS13A Q96RL7.S1416.p_VPS13A Q96RL7_S1416s_1_1_1416_1416 Q96RL7 Q96RL7|Q96RL7-3|Q96RL7-2|Q96RL7-4 Vacuolar protein sorting-associated protein 13A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18449.18449.2 11.73 11.73 2.113 3 1 1 0 878.4306 1692.9118 Q1414q S1416s Hydrogen 1414 (K) qAsFTDVRDPSLK (L) Q(1.0)AS(0.99)FT(0.0)DVRDPS(0.0)LK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S VPS13A 362095.2 4 3 2912.1 66.12 HUMAN 1 -1.0635 25.8516 SPGPTHNSPELGRPP-p Q6ZRV2;S1068-p SPGPTHNSPELGRPP 0.870798506448687 0.254852906832075 -0.0263333333333333 0.117 1.17743946710064 7.82101710888118 -0.0263333333333333 0.117 0.7625284524678 0.16515749574219 -0.317813555097113 1.60359940207967 Q6ZRV2 FAM83H Q6ZRV2.S1068.p_FAM83H Q6ZRV2_S1068s _1_1_1068_1068 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20018.20018.5 25.06 23.91 2.293 4 1 1 0 735.1796 3591.8994 S1068s TMT10 1056 (R) AVPAPSPGPTHNsPELGRPPAAGVLAPDMSDK (D) AVPAPS(0.0)PGPT(0.0)HNS(0.99)PELGRPPAAGVLAPDMS(0.0)DK K:TMT10,s:Phosphorylated S FAM83H 127633.5 16 33 7.1 1347.23 HUMAN 1 -1.1774 7.821 SPGRNGISPPNKLSQ-p P25054;S2337-p SPGRNGISPPNKLSQ 0.387913263195426 0.0234064468672893 -0.122333333333333 -0.307333333333333 7.60768037571144 22.2443594581459 -0.122333333333333 -0.307333333333333 0.173473029276017 0.00596436281861135 -1.56701988440695 -4.37334183370448 P25054 APC P25054.S2337.p_APC P25054_S2337s _1_1_2337_2337 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10366.10366.2 8.47 4.31 99 1 1 1 0 682.8705 1284.7676 S2337s TMT10 2334 (R) NGIsPPNK (L) NGIS(1.0)PPNK K:TMT10,s:Phosphorylated S APC 313808.5 2 36 33.1 890.71 HUMAN 1 -7.6077 -22.2444 SPGRNSISPGRNGIS-p P25054;S2330-p SPGRNSISPGRNGIS 0.838274783466982 0.289380506650575 -0.0303333333333333 -0.104 1.48206898541557 7.10583263704525 -0.0303333333333333 -0.104 0.710874771165467 0.194722768822387 -0.390781532233493 -1.47911138060233 P25054 APC P25054.S2330.p_APC P25054_S2330s _1_1_2330_2330 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10858.11071.3 12.94 8.59 1.549 3 1 1 0 692.705 1996.134 S2330s TMT10 2327 (R) NSIsPGRNGISPPNK (L) NS(0.0)IS(0.99)PGRNGIS(0.0)PPNK K:TMT10,s:Phosphorylated S APC 313808.5 6 35 33.1 890.71 HUMAN 1 -1.4821 -7.1058 SPGSPVNSHLPGSPK-p Q8NDX1;S138-p SPGSPVNSHLPGSPK 0.517744316023146 0.545409762007646 0.112 0.101 5.28024580716371 3.54111828799254 0.112 0.101 0.296466358721476 0.442474422596739 1.15517557504573 0.828201724116959 Q8NDX1 PSD4 Q8NDX1.S138.p_PSD4 Q8NDX1_S138sS143s_2_2_138_143 Q8NDX1 Q8NDX1|Q8NDX1-2 PH and SEC7 domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11980.11980.4 15.5 15.5 1.114 5 2 2 0 624.054 2333.2614 S138s S143s TMT10 127 (R) QNTASPGSPVNsHLPGsPK (Q) QNT(0.0)AS(0.0)PGS(0.0)PVNS(0.99)HLPGS(0.99)PK K:TMT10,s:Phosphorylated S PSD4 117388.3 3 6 3127.1 60.04 HUMAN 1 5.2802 3.5411 SPGTASPSPTKTTPS-p Q9Y597;S793-p SPGTASPSPTKTTPS 0.303353445531215 0.00356137322963082 -0.196 -0.700666666666667 9.71038691695237 36.5148494332141 -0.196 -0.700666666666667 0.106895964038174 0.000223107955607116 -1.93143577548758 -8.66896742803853 Q9Y597 KCTD3 Q9Y597.S793.p_KCTD3 Q9Y597_S793s _1_1_793_793 Q9Y597 Q9Y597|Q9Y597-2|Q9Y597-3 BTB/POZ domain-containing protein KCTD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14549.14549.5 27.37 27.37 1.853 12 1 1 0 764.2076 3737.0415 S793s TMT10 768 (R) KKVPYLASSPSTSDGGTDSPGTASPsPTK (T) KKVPY(0.0)LAS(0.0)S(0.0)PS(0.0)T(0.0)S(0.0)DGGT(0.0)DS(0.0)PGT(0.0)AS(0.0)PS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S KCTD3 89667 9 14 417.1 320.81 HUMAN 1 -9.7104 -36.5148 SPGTDSSSNLGGVKL-p Q7Z3B3;S256-p SPGTDSSSNLGGVKL 0.586683791103262 0.93010231287797 0.0763333333333333 -0.0126666666666667 4.26107722182322 0.444144863723708 0.0763333333333333 -0.0126666666666667 0.374880005666682 0.902787450990944 0.966717231952413 -0.127967040654465 Q7Z3B3 KANSL1 Q7Z3B3.S256.p_KANSL1 Q7Z3B3_S249sS256s_2_2_249_256 Q7Z3B3 Q7Z3B3|A0A0G2JQF4|A0A0G2JNT7|A0A0G2JNB1|A0A0G2JQF5 KAT8 regulatory NSL complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.31819.31819.5 15.23 15.23 1.125 11 2 2 0 903.0724 4351.3964 S249s S256s Hydrogen 248 (R) LsPGTDSSsNLGGVKLEGKKSPLSSILFSALDSDTR (I) LS(0.99)PGT(0.0)DS(0.0)S(0.0)S(0.99)NLGGVKLEGKKS(0.0)PLS(0.0)S(0.0)ILFS(0.0)ALDS(0.0)DT(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S KANSL1 121821.3 2 13 391.1 332.08 HUMAN 1 4.2611 -0.4441 SPGVGGGSGDEASAA-p O15209;S599-p SPGVGGGSGDEASAA 0.948131958402904 0.656313529899089 0.013 0.0576666666666667 0.459571886656026 2.49925810528293 0.013 0.0576666666666667 0.899586255440136 0.562437396798953 0.132221934881171 0.616653785539506 O15209 ZBTB22 O15209.S599.p_ZBTB22 O15209_S599s _1_1_599_599 O15209 O15209 Zinc finger and BTB domain-containing protein 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8264.8264.3 10.83 10.83 2.599 6 1 1 0 761.3456 2202.0472 S599s TMT10 591 (R) ESPGVGGGsGDEASAATPPSSR (R) ES(0.0)PGVGGGS(0.99)GDEAS(0.0)AAT(0.0)PPS(0.0)S(0.0)R s:Phosphorylated S ZBTB22 66342.9 1 2 3284.2 55.02 HUMAN 1 0.4596 2.4993 SPGYEPRSPGYEPRS-p Q9H5H4;S132-p SPGYEPRSPGYEPRS 0.915873056427191 0.110204808911674 0.018 0.335 0.747785771953246 12.6479176428447 0.018 0.335 0.841824231999843 0.0543510871865254 0.209358899077595 2.4465138209605 Q9H5H4 ZNF768 Q9H5H4.S132.p_ZNF768 Q9H5H4_S132s _1_1_132_132 Q9H5H4 Q9H5H4|H3BS42 Zinc finger protein 768 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11192.11192.3 12.32 12.32 2.314 5 1 1 0 806.7042 2338.1301 S132s TMT10 121 (R) YEPQSPGYEPRsPGYEPR (S) Y(0.0)EPQS(0.0)PGY(0.0)EPRS(0.99)PGY(0.0)EPR s:Phosphorylated S ZNF768 61482.8 1 136 240.2 415.72 HUMAN 1 0.7478 12.6479 SPGYEPRSPGYESES-p Q9H5H4;S139-p SPGYEPRSPGYESES 0.794385697846618 0.00418892678016622 -0.0456666666666667 0.575 1.92964543053986 34.9903904929951 -0.0456666666666667 0.575 0.641261928761852 0.000316928248630496 -0.49316452485299 8.0906765079303 Q9H5H4 ZNF768 Q9H5H4.S139.p_ZNF768 Q9H5H4_S139s _1_1_139_139 Q9H5H4 Q9H5H4|H3BS42 Zinc finger protein 768 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11389.11389.4 13.46 9.27 4.898 10 1 1 0 879.6625 3435.6705 S139s TMT10 132 (R) SPGYEPRsPGYESESSRYESQNTELK (T) S(0.0)PGY(0.0)EPRS(0.99)PGY(0.0)ES(0.0)ES(0.0)S(0.0)RY(0.0)ES(0.0)QNT(0.0)ELK K:TMT10,s:Phosphorylated S ZNF768 61482.8 2 137 240.2 415.72 HUMAN 1 -1.9296 34.9904 SPHCRKPSGSGDQSK-p Q8TBM8;S67-p SPHCRKPSGSGDQSK 0.0369271168076506 0.00157273645056424 -0.556333333333333 -1.08433333333333 32.8069013616527 45.0678589879486 -0.556333333333334 -1.08433333333333 0.000523974152438785 3.11325074864423e-05 -7.33372277904363 -12.663778643739 Q8TBM8 DNAJB14 Q8TBM8.S67.p_DNAJB14 Q8TBM8_S67s _1_1_67_67 Q8TBM8 Q8TBM8|A0A087WWX2 DnaJ homolog subfamily B member 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.4040.4040.3 13.06 7.87 1.793 4 1 1 0 786.7408 2278.2428 S67s Hydrogen 65 (R) KPsGSGDQSKPNCTK (D) KPS(0.99)GS(0.0)GDQS(0.0)KPNCT(0.0)K K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S DNAJB14 42971.4 4 1 5651.1 17.47 HUMAN 1 -32.8069 -45.0679 SPHFREKSPVREPVD-p Q86U06;S149-p SPHFREKSPVREPVD 0.369805323847201 0.50803806299551 0.169333333333333 0.0856666666666667 8.01384905566748 3.94124526409166 0.169333333333333 0.0856666666666667 0.157984723504749 0.403529671244426 1.63756297579631 0.90573005221598 Q86U06 RBM23 Q86U06.S149.p_RBM23 Q86U06_S149s _1_1_149_149 Q86U06 Q86U06|Q86U06-2|Q86U06-5|Q86U06-3 Probable RNA-binding protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10355.10355.4 17.22 17.22 4.537 2 1 1 0 630.5772 2439.3244 S149s TMT10 147 (R) EKsPVREPVDNLSPEER (D) EKS(0.99)PVREPVDNLS(0.0)PEER K:TMT10,s:Phosphorylated S RBM23 49015.1 5 6 1534.1 133.46 HUMAN 1 8.0138 3.9412 SPHLGLGSPRVSRAS-p Q9H4M7;S559-p SPHLGLGSPRVSRAS 0.576683296043079 0.0793118414432029 0.0873333333333333 0.2 4.3976286238215 14.6058077704755 0.0873333333333333 0.2 0.363276360250128 0.034627347312857 0.992413661698057 2.80307138234598 Q9H4M7 PLEKHA4 Q9H4M7.S559.p_PLEKHA4 Q9H4M7_S559s _1_1_559_559 Q9H4M7 Q9H4M7|Q9H4M7-2 Pleckstrin homology domain-containing family A member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15761.15761.3 12.71 12.71 5.342 2 1 1 0 543.6176 1548.8696 S559s TMT10 549 (K) DLASPHLGLGsPR (V) DLAS(0.0)PHLGLGS(0.99)PR s:Phosphorylated S PLEKHA4 85627.6 1 4 2661.1 74.78 HUMAN 1 4.3976 14.6058 SPHRRTLSFDTSKMN-p Q7L804-2;S277-p SPHRRTLSFDTSKMN 0.279704607737863 0.030302869111749 -0.173333333333333 -0.346333333333333 10.4591080058787 20.5353392948104 -0.173333333333333 -0.346333333333333 0.0899682347625532 0.0088402810134987 -2.06159848225469 -3.99093080602666 Q7L804 RAB11FIP2 Q7L804.2.S277.p_RAB11FIP2 Q7L804-2_S277s _1_1_277_277 Q7L804-2 Q7L804-2 Isoform 2 of Rab11 family-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18181.18181.2 8.22 8.22 2.533 4 1 1 0 718.8762 1356.7775 S277s TMT10 275 (R) TLsFDTSK (M) T(0.0)LS(0.99)FDT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S RAB11FIP2 60726.8 1 28 56.2 721.17 HUMAN 1 -10.4591 -20.5353 SPHSKTISESELSAS-p Q9BSQ5;S287-p SPHSKTISESELSAS 0.82811120087959 0.199108479575601 0.0553333333333333 0.350333333333333 1.57325491718056 9.22319421186025 0.0553333333333333 0.350333333333333 0.696104607382507 0.119586065888513 0.412075690592298 1.84632367892519 Q9BSQ5 CCM2 Q9BSQ5.S287.p_CCM2 Q9BSQ5_S287s _1_1_287_287 Q9BSQ5 Q9BSQ5-2|A0A0A0MT72|Q9BSQ5-4|Q9BSQ5-3|C9JUH3 Cerebral cavernous malformations 2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.37809.37809.3 26.08 26.08 1.107 8 1 1 0 960.8121 2800.4488 S287s TMT10 285 (K) TIsESELSASATELLQDYMLTLR (T) T(0.0)IS(0.99)ES(0.0)ELS(0.0)AS(0.0)AT(0.0)ELLQDY(0.0)MLT(0.0)LR s:Phosphorylated S CCM2 49292.3 4 4 2227.1 92.63 HUMAN 1 1.5733 9.2232 SPIEKVLSPLRSPPL-p P46821;S1396-p SPIEKVLSPLRSPPL 0.172012241579796 0.201973299909922 -0.251333333333333 -0.131333333333333 15.2222279630564 9.13935098756487 -0.251333333333333 -0.131333333333333 0.0300453455858016 0.121917177911782 -2.92023506431077 -1.83181784929164 P46821 MAP1B P46821.S1396.p_MAP1B P46821_S1396s _1_1_1396_1396 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33038.33038.3 13.26 13.26 1.309 7 1 1 0 1106.2458 3236.7455 S1396s TMT10 1394 (K) VLsPLRSPPLIGSESAYESFLSADDK (A) VLS(0.99)PLRS(0.0)PPLIGS(0.0)ES(0.0)AY(0.0)ES(0.0)FLS(0.0)ADDK K:TMT10,s:Phosphorylated S MAP1B 271827.6 2 11 210.1 442.48 HUMAN 1 -15.2222 -9.1394 SPINLSRSIDAALFR-p Q5FWE3;S815-p SPINLSRSIDAALFR 0.666069287714853 0.824824159835174 -0.0996666666666667 -0.0576666666666666 3.2992379323203 1.17237818768095 -0.0996666666666666 -0.0576666666666667 0.467817223174892 0.763417623170616 -0.780562319661037 -0.316543814623682 Q5FWE3 PRRT3 Q5FWE3.S815.p_PRRT3 Q5FWE3_S815s _1_1_815_815 Q5FWE3 Q5FWE3|Q5FWE3-2 Proline-rich transmembrane protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21722.21722.2 13.87 3.84 99 1 1 1 0 601.3129 1121.6516 S815s TMT10 815 (R) sIDAALFR (E) S(1.0)IDAALFR s:Phosphorylated S PRRT3 102765.9 4 4 931.1 199.28 HUMAN 1 -3.2992 -1.1724 SPINRRGSVSSVSPK-p Q9NZJ0;S485-p SPINRRGSVSSVSPK 0.120014369208718 0.0014286003693118 -0.278666666666667 -1.124 19.1615693751643 46.0293994892866 -0.278666666666667 -1.124 0.0121295045707446 2.49493968514406e-05 -3.70127966852728 -13.2066595608668 Q9NZJ0 DTL Q9NZJ0.S485.p_DTL Q9NZJ0_S485s _1_1_485_485 Q9NZJ0 Q9NZJ0|F5GZ90 Denticleless protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11919.11919.4 16.17 16.17 2.896 6 1 1 0 604.3416 2334.3748 S485s TMT10 483 (R) RGsVSSVSPKPPSSFK (M) RGS(0.99)VS(0.0)S(0.0)VS(0.0)PKPPS(0.0)S(0.0)FK K:TMT10,s:Phosphorylated S DTL 80892.7 4 7 461.1 305.23 HUMAN 1 -19.1616 -46.0294 SPISLAESWEDGSPP-p A1L170-2;S287-p SPISLAESWEDGSPP 0.393172704199713 0.045429483984758 0.116333333333333 0.249333333333333 7.47785110132217 17.9648979184401 0.116333333333333 0.249333333333333 0.178737175157368 0.0159775508408669 1.54442608655852 3.45234539795877 A1L170 C1orf226 A1L170.2.S287.p_C1orf226 A1L170-2_S287s _1_1_287_287 A1L170-2 A1L170-2 Isoform 2 of Uncharacterized protein C1orf226 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.31452.31660.3 28.6 28.6 4.635 5 1 1 0 882.7718 2566.335 S287s TMT10 277 (K) LSLSPISLAEsWEDGSPPPQAR (T) LS(0.0)LS(0.0)PIS(0.0)LAES(0.99)WEDGS(0.0)PPPQAR s:Phosphorylated S C1orf226 33805.4 5 7 1114.1 175.67 HUMAN 1 7.4779 17.9649 SPKAALHSPVSEGAP-p Q9NRA0-5;S546-p SPKAALHSPVSEGAP 0.507491654308782 0.53588372502445 0.103 -0.0686666666666666 5.43389665364064 3.64557930691407 0.103 -0.0686666666666666 0.286160927410882 0.431958544675125 1.18301116847783 -0.848610400025779 Q9NRA0 SPHK2 Q9NRA0.5.S546.p_SPHK2 Q9NRA0-5_S546s _1_1_546_546 Q9NRA0-5 Q9NRA0-5|M0R344|Q9NRA0-2|Q9NRA0-3|Q9NRA0-4|E9PCV4 Isoform 5 of Sphingosine kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24845.25051.4 14 13.13 1.788 5 1 1 0 761.4041 2962.6199 S546s TMT10 542 (K) AALHsPVSEGAPVIPPSSGLPLPTPDAR (V) AALHS(0.99)PVS(0.0)EGAPVIPPS(0.0)S(0.0)GLPLPT(0.0)PDAR s:Phosphorylated S SPHK2 81287.6 2 5 3042.1 62.32 HUMAN 1 5.4339 -3.6456 SPKAVASSPAATNSE-p Q9P1Y5;S554-p SPKAVASSPAATNSE 0.0431670381948327 0.00593909392828346 -0.524 -0.54 30.3134049253348 32.1663483223425 -0.524 -0.54 0.000930378160849664 0.000607246706147692 -6.52804732074442 -7.10694462497615 Q9P1Y5 CAMSAP3 Q9P1Y5.S554.p_CAMSAP3 Q9P1Y5_S554s _1_1_554_554 Q9P1Y5 Q9P1Y5-2 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9660.9660.2 15.54 10.45 1.176 4 1 1 0 935.4895 1790.006 S554s TMT10 550 (K) AVASsPAATNSEVK (M) AVAS(0.0)S(0.99)PAAT(0.0)NS(0.0)EVK K:TMT10,s:Phosphorylated S CAMSAP3 135546 3 12 217.1 432.4 HUMAN 1 -30.3134 -32.1663 SPKDVVASPKLPERE-p A0A0J9YWL0;S157-p SPKDVVASPKLPERE 0.656070561836029 0.0363715867017224 -0.0603333333333333 -0.405333333333333 3.43505032994628 19.3702144068998 -0.0603333333333333 -0.405333333333333 0.453414043179285 0.011560551674805 -0.807471717453874 -3.74171477862536 A0A0J9YWL0 NotFound A0A0J9YWL0.S157.p_NotFound A0A0J9YWL0_S157s _1_1_157_157 A0A0J9YWL0 A0A0J9YWL0 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10261.10261.4 12.58 8.24 10.674 2 1 1 0 563.3029 2170.2232 S157s TMT10 153 (K) DVVAsPKLPERESER (S) DVVAS(0.99)PKLPERES(0.0)ER K:TMT10,s:Phosphorylated S CRYBG1 233643.7 4 3 79.1 640.71 HUMAN 1 -3.4351 -19.3702 SPKFIGHSPQPLGYD-p Q8IZ41;S393-p SPKFIGHSPQPLGYD 0.477468266229797 0.00760455374265057 0.0963333333333333 -0.466333333333333 5.90607333982325 30.2552272707521 0.0963333333333334 -0.466333333333333 0.256680375538301 0.000942925265923481 1.26781322243705 -6.49973637195347 Q8IZ41 RASEF Q8IZ41.S393.p_RASEF Q8IZ41_S393s _1_1_393_393 Q8IZ41 Q8IZ41 Ras and EF-hand domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15709.15709.3 11.71 11.71 11.71 2 1 1 0 599.2961 1715.9067 S393s TMT10 389 (K) FIGHsPQPLGYDR (S) FIGHS(0.99)PQPLGY(0.0)DR s:Phosphorylated S RASEF 83619.4 1 4 1851.1 111.08 HUMAN 1 5.9061 -30.2552 SPKGAVRSPPVDCPR-p Q5VZK9;S1101-p SPKGAVRSPPVDCPR 0.391198751974399 0.526728879132744 -0.177666666666667 -0.0723333333333333 7.5199371622293 3.74199245799281 -0.177666666666667 -0.0723333333333333 0.177013457008781 0.422474746661341 -1.55175298610796 -0.867338285493396 Q5VZK9 LRRC16A Q5VZK9.S1101.p_LRRC16A Q5VZK9_S1101s _1_1_1101_1101 Q5VZK9 Q5VZK9 F-actin-uncapping protein LRRC16A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6952.6952.4 10.13 6.81 99 1 1 1 0 495.017 1897.0842 S1101s TMT10 1097 (K) GAVRsPPVDCPRK (D) GAVRS(1.0)PPVDCPRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CARMIL1 152809.3 1 8 280.1 388.82 HUMAN 1 -7.5199 -3.742 SPKGGLATPPHKGAP-p E9PAV3;T1119-p SPKGGLATPPHKGAP 0.733523257001101 0.0335244668360361 0.0476666666666667 -0.296 2.54785164576237 19.8772958383485 0.0476666666666667 -0.296 0.556179318261612 0.0102865659820256 0.626978371799941 -3.84909250335261 E9PAV3 NACA E9PAV3.T1119.p_NACA E9PAV3_T1119t _1_1_1119_1119 E9PAV3 E9PAV3 Nascent polypeptide-associated complex subunit alpha, muscle-specific form HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8643.8643.3 7.75 7.75 99 1 1 1 0 472.5986 1335.8149 T1119t TMT10 1115 (K) GGLAtPPHK (G) GGLAT(1.0)PPHK K:TMT10,t:Phosphorylated T NACA 206102.3 2 5 533.1 279.72 HUMAN 1 2.5479 -19.8773 SPKGRPSSPRTPLYL-p Q8WUF5;S120-p SPKGRPSSPRTPLYL 0.613648628647483 0.0293547526360684 0.0966666666666667 0.279666666666667 3.93428636766235 20.7414524495342 0.0966666666666667 0.279666666666667 0.404176783353194 0.00843052761003404 0.904547387707185 4.0359553466329 Q8WUF5 PPP1R13L Q8WUF5.S120.p_PPP1R13L Q8WUF5_S120s _1_1_120_120 Q8WUF5 Q8WUF5 RelA-associated inhibitor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.2881.2881.3 7.36 2.12 1.531 2 1 1 0 355.8518 985.574 S120s TMT10 116 (K) GRPSsPR (T) GRPS(0.0)S(0.99)PR s:Phosphorylated S PPP1R13L 89431.8 2 6 371.1 339.39 HUMAN 1 3.9343 20.7415 SPKKNKASPAVALPK-p Q5FBB7;S468-p SPKKNKASPAVALPK 0.409512605417896 0.00297589273654222 0.153 -0.748333333333333 7.14622875339018 38.0554911361503 0.153 -0.748333333333334 0.192919942878943 0.000156477135192122 1.486586292119 -9.29022646476402 Q5FBB7 SGOL1 Q5FBB7.S468.p_SGOL1 Q5FBB7_S468s _1_1_468_468 Q5FBB7 Q5FBB7|Q5FBB7-6|Q5FBB7-2|Q5FBB7-3|Q5FBB7-4|Q5FBB7-5 Shugoshin 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13885.13885.3 13.34 11.82 99 1 1 1 0 621.7072 1783.1409 S468s TMT10 465 (K) NKAsPAVALPK (R) NKAS(1.0)PAVALPK K:TMT10,s:Phosphorylated S SGO1 65044.6 3 19 1140.1 173.27 HUMAN 1 7.1462 -38.0555 SPKLKRKSKKDDGDA-p Q6P2E9;S925-p SPKLKRKSKKDDGDA 0.644663689830828 0.518246763658541 0.0766666666666667 -0.0706666666666667 3.56789652274864 3.83441077692938 0.0766666666666667 -0.0706666666666667 0.439754556142236 0.413579422361155 0.83357564629757 -0.88519631876542 Q6P2E9 EDC4 Q6P2E9.S925.p_EDC4 Q6P2E9_S925s _1_1_925_925 Q6P2E9 Q6P2E9|Q6P2E9-2 Enhancer of mRNA-decapping protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5091.5091.3 7.11 7.11 7.111 2 1 1 0 702.3602 2025.1002 S925s TMT10 925 (K) sKKDDGDAAMGSR (L) S(0.99)KKDDGDAAMGS(0.0)R K:TMT10,s:Phosphorylated S EDC4 153084.9 1 18 177.1 481.34 HUMAN 1 3.5679 -3.8344 SPKLQRRSVSKLDSS-p O94964-2;S1448-p SPKLQRRSVSKLDSS 0.827075851321962 0.0254785458919158 -0.0373333333333333 -0.479666666666667 1.5881867888598 21.6885635460648 -0.0373333333333333 -0.479666666666667 0.693715376793308 0.0067786567850105 -0.415540228897668 -4.24666380949948 O94964 SOGA1 O94964.2.S1448.p_SOGA1 O94964-2_S1448s _1_1_1448_1448 O94964-2 O94964-2|O94964-3 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11056.11056.3 9.32 9.32 9.322 4 1 1 0 573.3289 1638.0041 S1448s TMT10 1448 (R) sVSKLDSSK (D) S(0.99)VS(0.0)KLDS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SOGA1 185623.3 1 19 215.1 433.51 HUMAN 1 -1.5882 -21.6886 SPKPLLQSPKPSLAA-p Q5VZK9;S1261-p SPKPLLQSPKPSLAA 0.269545395608694 0.0260088645003298 -0.386 0.405333333333333 10.7911073643606 21.5511295754578 -0.386 0.405333333333333 0.0833468639633907 0.00699659994715267 -2.11955199274767 4.21569080097162 Q5VZK9 LRRC16A Q5VZK9.S1261.p_LRRC16A Q5VZK9_S1261s _1_1_1261_1261 Q5VZK9 Q5VZK9 F-actin-uncapping protein LRRC16A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18876.18876.5 8.72 6.28 8.716 2 1 1 0 612.9733 2980.8755 S1261s TMT10 1257 (K) PLLQsPKPSLAARPVIPQKPR (T) PLLQS(0.99)PKPS(0.0)LAARPVIPQKPR K:TMT10,s:Phosphorylated S CARMIL1 152809.3 1 12 280.1 388.82 HUMAN 1 -10.7911 21.5511 SPKRRQRSMSPTSTP-p O94913;S509-p SPKRRQRSMSPTSTP 0.506547452586358 0.664728652832341 0.126 -0.044 5.4503250590426 2.42813858696172 0.126 -0.044 0.285080488358459 0.571723628452536 1.18597989073072 -0.601583565951867 O94913 PCF11 O94913.S509.p_PCF11 O94913_S509sS511s_2_2_509_511 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6042.6042.2 10.22 10.22 3.391 5 2 2 0 670.7743 1164.6132 S509s M510m S511s Hydrogen 509 (R) smsPTSTPK (A) S(0.99)M(1.0)S(0.99)PT(0.0)S(0.0)T(0.0)PK K:TMT10-Lys-Only,s:Phosphorylated S,m:Oxidized methionine PCF11 173731.7 13 24 508.1 288.88 HUMAN 1 5.4503 -2.4281 SPKRRRLSSSLNPSK-p Q13535;S435-p SPKRRRLSSSLNPSK 0.0114491309368266 0.00187523755214301 -1.00933333333333 -0.825666666666667 46.5925956147882 42.8355357220871 -1.00933333333333 -0.825666666666667 2.19149476986527e-05 5.20530794989134e-05 -13.5730961095373 -11.4833182267432 Q13535 ATR Q13535.S435.p_ATR Q13535_S435s _1_1_435_435 Q13535 Q13535|Q13535-3|Q13535-2 Serine/threonine-protein kinase ATR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11102.11102.2 7.53 7.53 1.16 4 1 1 0 813.9506 1546.9317 S435s TMT10 433 (R) RLsSSLNPSK (R) RLS(0.99)S(0.0)S(0.0)LNPS(0.0)K K:TMT10,s:Phosphorylated S ATR 304955.6 5 2 3206.1 57.57 HUMAN 1 -46.5926 -42.8355 SPKRRSLSPKPRDKS-p Q13523;S356-p SPKRRSLSPKPRDKS 0.47451765078145 0.170379521439076 0.132 0.277666666666667 5.96332698109568 10.1057363940038 0.132 0.277666666666667 0.253318729907849 0.0975947285816074 1.27802781911888 1.99926848503751 Q13523 PRPF4B Q13523.S356.p_PRPF4B Q13523_S356s _1_1_356_356 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7892.7892.3 7.4 4.32 1.124 2 1 1 0 441.5914 1242.7934 S356s TMT10 354 (R) SLsPKPR (D) S(0.0)LS(0.99)PKPR K:TMT10,s:Phosphorylated S PRPF4B 117327.1 3 17 70.1 666.55 HUMAN 1 5.9633 10.1057 SPKTAMPSPGVSQNK-p Q86UU0;S1017-p SPKTAMPSPGVSQNK 0.784196951840304 0.0413011052746162 0.041 0.25 2.03221902148342 18.5543198492234 0.041 0.25 0.626293778989304 0.0139498010907148 0.515925409418857 3.57229194439808 Q86UU0 BCL9L Q86UU0.S1017.p_BCL9L Q86UU0_S1017s_1_1_1017_1017 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23031.23031.5 15.57 12.89 0.579 10 1 1 0 899.2478 4410.2256 S1017s N1031n N1038n TMT10 1013 (K) TAMPsPGVSQNKQPPLNMnSSTTLSnMEQGTLPPSGPR (S) T(0.0)AMPS(0.99)PGVS(0.0)QN(0.0)KQPPLN(0.33)MN(0.33)S(0.0)S(0.0)T(0.0)T(0.0)LS(0.0)N(0.33)MEQGT(0.0)LPPS(0.0)GPR K:TMT10,s:Phosphorylated S,n:Deamidated BCL9L 157526.3 19 23 139.1 524.37 HUMAN 1 2.0322 18.5543 SPKTKECSVEKGTGD-p Q05519-2;S455-p SPKTKECSVEKGTGD 0.237800187730078 0.00665255627937027 0.389666666666667 -0.727 11.9549106546595 31.2815633790409 0.389666666666667 -0.727 0.0637542196752725 0.00074446393254928 2.3243395455811 -6.82029575197176 Q05519 SRSF11 Q05519.2.S455.p_SRSF11 Q05519-2_S455s _1_1_455_455 Q05519-2 Q05519|Q05519-2|Q5T757 Isoform 2 of Serine/arginine-rich splicing factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8420.8420.3 10.64 10.64 2.17 4 1 1 0 850.435 2469.3222 S455s TMT10 453 (K) ECsVEKGTGDSLRESK (V) ECS(0.99)VEKGT(0.0)GDS(0.0)LRES(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SRSF11 53527.2 8 10 185.1 475.04 HUMAN 1 11.9549 -31.2816 SPLARTPSPTPQPTS-p O15021;S1387-p SPLARTPSPTPQPTS 0.115313884527732 0.0285703245827849 0.348666666666667 0.357 19.5268639937466 20.912909412977 0.348666666666667 0.357 0.0111509944747546 0.0081041796311233 3.77813798360043 4.07363174856076 O15021 MAST4 O15021.S1387.p_MAST4 O15021_S1387s _1_1_1387_1387 O15021 O15021|J3QT34|O15021-1|E7EWQ5|O15021-3|O15021-2 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6706.6706.2 9.47 4.69 1.396 5 1 1 0 851.9243 1622.87 S1387s TMT10 1385 (R) TPsPTPQPTSPQR (S) T(0.0)PS(0.99)PT(0.0)PQPT(0.0)S(0.0)PQR s:Phosphorylated S MAST4 286597.7 1 8 121.99 549.41 HUMAN 1 19.5269 20.9129 SPLATPASPSAAPEP-p Q9BY89;S465-p SPLATPASPSAAPEP 0.838645264365159 0.0187035406492579 -0.0403333333333334 -0.329666666666667 1.47895219025871 23.7762616191465 -0.0403333333333334 -0.329666666666667 0.711385126783161 0.0041915421530756 -0.390049448959357 -4.73483383348528 Q9BY89 KIAA1671 Q9BY89.S465.p_KIAA1671 Q9BY89_S465s _1_1_465_465 Q9BY89 Q9BY89 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31084.31084.4 22.77 21.98 1.102 8 1 1 0 1035.0338 4057.1204 S465s TMT10 440 (K) CISLFREDSTLALAVGSESPLATPAsPSAAPEPEK (G) CIS(0.0)LFREDS(0.0)T(0.0)LALAVGS(0.0)ES(0.0)PLAT(0.0)PAS(0.99)PS(0.0)AAPEPEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIAA1671 197734.4 3 9 105.1 590.35 HUMAN 1 -1.479 -23.7763 SPLGARASPPRSGVS-p Q99700;S132-p SPLGARASPPRSGVS 0.656414826447476 0.615020805593117 0.0926666666666667 -0.0756666666666666 3.43037391846361 2.86776989204998 0.0926666666666667 -0.0756666666666666 0.453902534909094 0.51668161786256 0.806548962447772 -0.693329601038997 Q99700 ATXN2 Q99700.S132.p_ATXN2 Q99700_S132s _1_1_132_132 Q99700 Q99700 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7658.7658.3 9.34 5.1 4.846 2 1 1 0 496.9341 1408.8222 S132s TMT10 124 (R) ASPLGARAsPPR (S) AS(0.0)PLGARAS(0.99)PPR s:Phosphorylated S ATXN2 140907.9 2 2 176.1 481.52 HUMAN 1 3.4304 -2.8678 SPLISLPSPVPPLSP-p P51825-2;S213-p SPLISLPSPVPPLSP 0.256105749737423 0.356674456063827 0.211333333333333 0.118333333333333 11.2358382104311 5.9389579217353 0.211333333333333 0.118333333333333 0.0752343510037304 0.254744143117375 2.1974788209298 1.2733817568929 P51825 AFF1 P51825.2.S213.p_AFF1 P51825-2_S213sS219s_2_2_213_219 P51825-2 P51825-2|P51825-3|F5GXF9 Isoform 2 of AF4/FMR2 family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25329.25329.5 22.9 14.08 3.636 9 2 2 0 1027.1067 4971.5584 S213s S219s TMT10 187 (R) RADGDHCASVTDSAPERELSPLISLPsPVPPLsPIHSNQQTLPR (T) RADGDHCAS(0.0)VT(0.0)DS(0.0)APERELS(0.0)PLIS(0.0)LPS(0.99)PVPPLS(0.99)PIHS(0.0)NQQT(0.0)LPR C:Carbamidomethylation,s:Phosphorylated S AFF1 133180 7 9 1199.1 167.15 HUMAN 1 11.2358 5.939 SPLKAALSEEELEKK-p Q04637-9;S1245-p SPLKAALSEEELEKK 0.0447859715508879 0.00177248368133933 0.515333333333333 1.20766666666667 29.9241271943686 43.4116497685648 0.515333333333333 1.20766666666667 0.00101762385843812 4.55863712625456e-05 6.40907227283745 11.7776808604722 Q04637 EIF4G1 Q04637.9.S1245.p_EIF4G1 Q04637-9_S1245s _1_1_1245_1245 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1|Q04637-4|E7EX73 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14912.14912.2 16.76 16.76 99 1 1 1 0 1007.5572 1934.1413 S1245s TMT10 1242 (K) AALsEEELEKK (S) AALS(1.0)EEELEKK K:TMT10,s:Phosphorylated S EIF4G1 176975.4 3 30 107.1 585.61 HUMAN 1 29.9241 43.4116 SPLKDNPSPEPQLDD-p Q96JC9;S165-p SPLKDNPSPEPQLDD 0.231296617020693 0.0376827059664672 0.270666666666667 0.296666666666667 12.2247329752156 19.1294467194793 0.270666666666667 0.296666666666667 0.0599137775302532 0.0122195532436103 2.37226052088852 3.6912970480622 Q96JC9 EAF1 Q96JC9.S165.p_EAF1 Q96JC9_S165s _1_1_165_165 Q96JC9 Q96JC9|Q96JC9-2 ELL-associated factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16046.16046.3 19.1 16.83 3.809 3 1 1 0 973.1921 2837.5976 S165s TMT10 157 (K) TSPLKDNPsPEPQLDDIKR (E) T(0.0)S(0.0)PLKDNPS(0.99)PEPQLDDIKR K:TMT10,s:Phosphorylated S EAF1 29212.6 10 5 2357.1 86.81 HUMAN 1 12.2247 19.1294 SPLKFQRTPVRQSVR-p Q6P4F7;T836-p SPLKFQRTPVRQSVR 0.259226874055277 0.0051946912647084 -0.161333333333333 -0.790666666666667 11.1365505110578 33.2275327529083 -0.161333333333333 -0.790666666666667 0.076974158341314 0.000475605342809043 -2.18004927029441 -7.4639320910044 Q6P4F7 ARHGAP11A Q6P4F7.T836.p_ARHGAP11A Q6P4F7_T836t _1_1_836_836 Q6P4F7 Q6P4F7|Q6P4F7-3 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6086.6086.3 9.13 9.13 99 1 1 1 0 404.8865 1132.6788 T836t TMT10 833 (K) FQRtPVR (Q) FQRT(1.0)PVR t:Phosphorylated T ARHGAP11A 114948.2 1 15 414.1 321.53 HUMAN 1 -11.1366 -33.2275 SPLKKSPSAGDVHIL-p Q9Y2H2;S942-p SPLKKSPSAGDVHIL 0.321266030442159 0.715223919606163 -0.250666666666667 0.0386666666666667 9.23326998112617 2.00293168082193 -0.250666666666667 0.0386666666666667 0.119308944025434 0.630531563949518 -1.84875079882511 0.509392009695001 Q9Y2H2 INPP5F Q9Y2H2.S942.p_INPP5F Q9Y2H2_S942s _1_1_942_942 Q9Y2H2 Q9Y2H2|Q9Y2H2-4 Phosphatidylinositide phosphatase SAC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22616.22616.5 25.58 25.58 1.499 4 1 1 0 622.9125 3030.5694 S942s TMT10 940 (K) SPsAGDVHILTGFAKPMDIYCHR (F) S(0.0)PS(0.99)AGDVHILT(0.0)GFAKPMDIY(0.0)CHR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S INPP5F 129431.7 11 5 928.1 199.49 HUMAN 1 -9.2333 2.0029 SPLKRSVSLTPPMNV-p Q9UPU9;S254-p SPLKRSVSLTPPMNV 0.489684088322886 0.887607493896279 -0.112333333333333 0.0193333333333334 5.71585033812531 0.727930586937543 -0.112333333333333 0.0193333333333333 0.268172948003391 0.84568171647848 -1.23377468142679 0.204148166601939 Q9UPU9 SAMD4A Q9UPU9.S254.p_SAMD4A Q9UPU9_S254sT256tS272s_3_3_254_272 Q9UPU9 Q9UPU9|Q9UPU9-2 Protein Smaug homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26644.26644.4 8.1 8.1 1.188 4 3 3 0 842.8694 3128.5607 S254s T256t S272s TMT10 252 (R) SVsLtPPMNVPNQPLGHGWMsHEDLR (A) S(0.0)VS(0.99)LT(0.99)PPMNVPNQPLGHGWMS(0.99)HEDLR s:Phosphorylated S,t:Phosphorylated T SAMD4A 80097.9 1 12 2441.1 83.32 HUMAN 1 -5.7159 0.7279 SPLKSVVSPVKSAVD-p Q12955;S1680-p SPLKSVVSPVKSAVD 0.493296639932215 0.00244370527796365 -0.121 -0.872333333333333 5.65072734453119 40.0706015277258 -0.121 -0.872333333333333 0.272224535568452 9.83874822893787e-05 -1.22208407698259 -10.1631641404598 Q12955 ANK3 Q12955.S1680.p_ANK3 Q12955_S1680s _1_1_1680_1680 Q12955 Q12955 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12982.12982.2 9.45 9.45 2.109 2 1 1 0 627.3685 1173.7607 S1680s TMT10 1677 (K) SVVsPVK (S) S(0.0)VVS(0.99)PVK K:TMT10,s:Phosphorylated S ANK3 482683.6 1 17 135.1 530.51 HUMAN 1 -5.6507 -40.0706 SPLKYLDTPTKSLLD-p O43151-4;T808-p SPLKYLDTPTKSLLD 0.0635370415880919 0.000952253650599092 -0.792666666666667 -2.042 25.8956887211139 59.2743874804684 -0.792666666666667 -2.042 0.00257294870383878 1.18184698593021e-06 -5.27426308689422 -23.3868749736613 O43151 NotFound O43151.4.T808.p_NotFound O43151-4_T808t _1_1_808_808 O43151-4 O43151-4|J3KNF3|O43151-2|O43151-3 Isoform 4 of Methylcytosine dioxygenase TET3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13041.13041.2 10.3 6.21 1.654 3 1 1 0 688.368 1295.7611 T808t TMT10 805 (K) YLDtPTK (S) Y(0.0)LDT(0.99)PT(0.0)K K:TMT10,t:Phosphorylated T TET3 195926.1 1 6 1535.1 133.43 HUMAN 1 -25.8957 -59.2744 SPLLAGGSPPQPVVP-p Q8NFH5;S73-p SPLLAGGSPPQPVVP 0.925484151891915 0.207535722767541 0.016 -0.140666666666667 0.6636931601695 8.98220434755284 0.016 -0.140666666666667 0.858283342760283 0.126409456840723 0.187252827594238 -1.80463449051448 Q8NFH5 NUP35 Q8NFH5.S73.p_NUP35 Q8NFH5_S73s _1_1_73_73 Q8NFH5 Q8NFH5|Q8NFH5-2|F8WEL4|F8WCF5 Nucleoporin NUP53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19390.19602.4 18.86 18.86 8.015 2 1 1 0 573.3235 2210.3061 S73s TMT10 66 (R) SPLLAGGsPPQPVVPAHK (D) S(0.0)PLLAGGS(0.99)PPQPVVPAHK K:TMT10,s:Phosphorylated S NUP35 34887.3 5 6 627.1 257.69 HUMAN 1 0.6637 -8.9822 SPLNLKGSSEQLHGR-p Q9P219;S1591-p SPLNLKGSSEQLHGR 0.615350842498504 0.942693111805338 -0.0703333333333333 -0.00766666666666665 3.91199665832236 0.366672247331313 -0.0703333333333333 -0.00766666666666665 0.406256510780678 0.919036532404672 -0.900269895929373 -0.106471768425072 Q9P219 CCDC88C Q9P219.S1591.p_CCDC88C Q9P219_S1591s _1_1_1591_1591 Q9P219 Q9P219|Q9P219-2|A0A0A0MR69|Q9P219-3 Protein Daple HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11210.11210.3 15.78 15.78 1.113 7 1 1 0 917.799 2671.4164 S1591s TMT10 1578 (R) NTSSNSSPLNLKGsSEQLHGR (S) NT(0.0)S(0.0)S(0.0)NS(0.0)S(0.0)PLNLKGS(0.99)S(0.0)EQLHGR K:TMT10,s:Phosphorylated S CCDC88C 229367.3 2 11 742.1 234.08 HUMAN 1 -3.912 -0.3667 SPLQRQPSSPGPTPR-p Q13424;S200-p SPLQRQPSSPGPTPR 0.259024801171766 0.125712138011132 0.173 0.238 11.1490758054494 11.8772670800216 0.173 0.238 0.07675248040713 0.0649042733432977 2.18224697077927 2.30944547815135 Q13424 SNTA1 Q13424.S200.p_SNTA1 Q13424_S200sS201s_2_2_200_201 Q13424 Q13424|Q13424-2 Alpha-1-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18003.18003.3 9.82 9.82 1.491 9 2 2 0 1136.5242 3247.6293 S200s S201s TMT10 178 (K) NSTGGTSVGWDSPPASPLQRQPssPGPTPR (N) NS(0.0)T(0.0)GGT(0.0)S(0.0)VGWDS(0.0)PPAS(0.0)PLQRQPS(0.99)S(0.99)PGPT(0.0)PR s:Phosphorylated S SNTA1 54236.6 1 5 4013.1 39.08 HUMAN 1 11.1491 11.8773 SPLRERLSPENRTTD-p Q2M2Z5;S283-p SPLRERLSPENRTTD 0.319825102614354 0.189961765502248 -0.228 -0.210333333333333 9.26877913397081 9.48712028676553 -0.228 -0.210333333333333 0.118337417295557 0.112535092260373 -1.85490032780275 -1.8920048043083 Q2M2Z5 KIZ Q2M2Z5.S283.p_KIZ Q2M2Z5_S283s _1_1_283_283 Q2M2Z5 Q2M2Z5|Q2M2Z5-4|Q2M2Z5-3|A0A087X251 Centrosomal protein kizuna HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11465.11465.4 10.32 10.32 1.836 3 1 1 0 570.0444 2197.1887 S283s TMT10 271 (K) SAELNSPLRERLsPENR (T) S(0.0)AELNS(0.0)PLRERLS(0.99)PENR s:Phosphorylated S KIZ 75794.3 1 1 2276.1 90.11 HUMAN 1 -9.2688 -9.4871 SPLSKRLSPQPQIRA-p Q49A88;S798-p SPLSKRLSPQPQIRA 0.286555852761634 0.0318082035389879 -0.151 -0.485666666666667 10.2425268231197 20.218810012382 -0.151 -0.485666666666667 0.094568677939935 0.00950865299597202 -2.02387894512168 -3.92234583497316 Q49A88 CCDC14 Q49A88.S798.p_CCDC14 Q49A88_S798s _1_1_798_798 Q49A88 Q49A88|Q49A88-6|J3QT39|A0A0A0MR27|Q49A88-5|Q49A88-3|Q49A88-2 Coiled-coil domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7876.7876.2 8.16 8.16 99 1 1 1 0 702.3893 1323.8058 S798s TMT10 796 (K) RLsPQPQIR (A) RLS(1.0)PQPQIR s:Phosphorylated S CCDC14 107269.8 3 6 1707.1 120.05 HUMAN 1 -10.2425 -20.2188 SPLVGDISPKSSPHE-p Q9UQR0;S590-p SPLVGDISPKSSPHE 0.844461319459807 0.0129171672232202 -0.0283333333333333 -0.440333333333333 1.42075128334824 26.2998232883351 -0.0283333333333333 -0.440333333333333 0.720982746033469 0.00234432420244136 -0.376326282087104 -5.37352985435215 Q9UQR0 SCML2 Q9UQR0.S590.p_SCML2 Q9UQR0_S590s _1_1_590_590 Q9UQR0 Q9UQR0|Q9UQR0-2 Sex comb on midleg-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21189.21189.2 19.58 16.24 5.611 6 1 1 0 1090.5854 2100.1953 S590s TMT10 576 (R) SVPGTTSSPLVGDIsPK (S) S(0.0)VPGT(0.0)T(0.0)S(0.0)S(0.0)PLVGDIS(0.99)PK K:TMT10,s:Phosphorylated S SCML2 78111.2 5 5 1086.1 179.58 HUMAN 1 -1.4208 -26.2998 SPLVKQLSEVFETED-p Q99618;S94-p SPLVKQLSEVFETED 0.130343131685262 0.00440462181774013 -0.302 -0.647333333333333 18.3013004470334 34.6174617327532 -0.302 -0.647333333333333 0.0147866555174303 0.000345345520189039 -3.52350137161722 -7.95444442918528 Q99618 CDCA3 Q99618.S94.p_CDCA3 Q99618_S94s _1_1_94_94 Q99618 Q99618|F8WDL1|F5GX58 Cell division cycle-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22843.22843.3 14.93 14.93 6.093 3 1 1 0 650.6557 1869.9846 S94s TMT10 92 (K) QLsEVFETEDSK (S) QLS(0.99)EVFET(0.0)EDS(0.0)K K:TMT10,s:Phosphorylated S CDCA3 28997.8 2 7 831.1 215.73 HUMAN 1 -18.3013 -34.6175 SPLVRQLSTSSDSPA-p A0A0G2JNB1;S827-p SPLVRQLSTSSDSPA 0.164891315062604 0.217488013651443 0.229333333333333 0.17 15.675879953558 8.71940136037388 0.229333333333333 0.17 0.0270652476098999 0.134295006312539 3.00620032028063 1.75917951205032 A0A0G2JNB1 KANSL1 A0A0G2JNB1.S827.p_KANSL1 A0A0G2JNB1_S827s _1_1_827_827 A0A0G2JNB1 A0A0G2JNB1|A0A0G2JQF5|A0A1W2PRB5|A0A0J9YVS1 KAT8 regulatory NSL complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8982.8982.3 13.47 8.56 1.105 13 1 1 0 1043.5074 3048.5395 S827s TMT10 825 (R) QLsTSSDSPAPASSSSQVTASTSQPVRR (R) QLS(0.99)T(0.0)S(0.0)S(0.0)DS(0.0)PAPAS(0.0)S(0.0)S(0.0)S(0.0)QVT(0.0)AS(0.0)T(0.0)S(0.0)QPVRR s:Phosphorylated S KANSL1 121650.2 1 1 391.2 332.08 HUMAN 1 15.6759 8.7194 SPMRRPQSADAYMTR-p O94967-4;S311-p SPMRRPQSADAYMTR 0.193799410315791 0.247336675766281 0.256 0.134333333333333 13.9152425284687 7.99406621865723 0.256 0.134333333333333 0.040595299248073 0.158706011781118 2.67737003124811 1.63361384946536 O94967 WDR47 O94967.4.S311.p_WDR47 O94967-4_S311s _1_1_311_311 O94967-4 O94967-4|O94967-3|A0A0A0MRE6|O94967-2 Isoform 4 of WD repeat-containing protein 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6883.6883.3 13.93 9 3.886 3 1 1 0 535.587 1524.779 S311s TMT10 308 (R) RPQsADAYMTR (S) RPQS(0.99)ADAY(0.0)MT(0.0)R s:Phosphorylated S WDR47 104479 2 3 1798.1 114.19 HUMAN 1 13.9152 7.9941 SPNKQPSSEPEWTPE-p Q5JSZ5;S914-p SPNKQPSSEPEWTPE 0.319858276916972 0.0320298911263569 -0.162 -0.294 9.26784029646688 20.181494366985 -0.162 -0.294 0.118363001690356 0.00959070567456563 -1.85473773189871 -3.91430444646151 Q5JSZ5 PRRC2B Q5JSZ5.S914.p_PRRC2B Q5JSZ5_S914s _1_1_914_914 Q5JSZ5 Q5JSZ5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11472.11472.3 12.81 9.14 1.122 4 1 1 0 892.4351 2595.3204 S914s TMT10 905 (K) NGSPNKQPSsEPEWTPEPR (S) NGS(0.0)PNKQPS(0.0)S(0.99)EPEWT(0.0)PEPR K:TMT10,s:Phosphorylated S PRRC2B 244103.4 1 68 36.2 882.05 HUMAN 1 -9.2678 -20.1815 SPNPFVGSPPKGLSI-p P98082;S401-p SPNPFVGSPPKGLSI 0.0395731079578075 0.101598887859872 -0.582 -0.175 31.3485084421461 13.1212027330664 -0.582 -0.175 0.000733076260470407 0.048739349288981 -6.85313614211731 -2.53152565567343 P98082 DAB2 P98082.S401.p_DAB2 P98082_S401s _1_1_401_401 P98082 P98082|P98082-3 Disabled homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17407.17407.2 15.02 11.49 7.572 3 1 1 0 876.463 1671.947 S401s TMT10 393 (K) SSPNPFVGsPPK (G) S(0.0)S(0.0)PNPFVGS(0.99)PPK K:TMT10,s:Phosphorylated S DAB2 82560.5 2 2 3833.1 42.1 HUMAN 1 -31.3485 -13.1212 SPNRSLPSPGVLCGS-p P18848;S248-p SPNRSLPSPGVLCGS 0.56081459207563 0.489843879097225 -0.263666666666667 0.093 4.62854829888176 4.14354100755331 -0.263666666666667 0.093 0.344465054661634 0.385164187093219 -1.03552551543451 0.944305866804217 P18848 ATF4 P18848.S248.p_ATF4 P18848_S248s _1_1_248_248 P18848 P18848 Cyclic AMP-dependent transcription factor ATF-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19289.19289.3 12.86 12.86 3.186 3 1 1 0 537.2704 1529.8307 S248s TMT10 245 (R) SLPsPGVLCGSAR (P) S(0.0)LPS(0.99)PGVLCGS(0.0)AR C:Carbamidomethylation,s:Phosphorylated S ATF4 38874.1 2 2 4152.1 36.57 HUMAN 1 -4.6285 4.1435 SPPAGLLSDDDVVVS-p O95235;S14-p SPPAGLLSDDDVVVS 0.0614259829561859 0.00112205987963851 0.612666666666667 -1.12733333333333 26.3998264695846 49.3096346255883 0.612666666666667 -1.12733333333333 0.00229095919046263 1.17229398715778e-05 5.40727215965608 -15.2300818287791 O95235 KIF20A O95235.S14.p_KIF20A O95235_S14s _1_1_14_14 O95235 O95235|O95235-2 Kinesin-like protein KIF20A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36810.36810.5 27.69 27.69 2.265 7 1 1 0 802.6064 3929.0415 S14s Acetyl 2 (M) SQGILSPPAGLLsDDDVVVSPMFESTAADLGSVVRK (N) S(0.0)QGILS(0.0)PPAGLLS(0.99)DDDVVVS(0.0)PMFES(0.0)T(0.0)AADLGS(0.0)VVRK K:TMT10,s:Phosphorylated S KIF20A 101303.1 4 2 845.1 213.8 HUMAN 1 26.3998 -49.3096 SPPFEKESEPESPMD-p Q86W56;S298-p SPPFEKESEPESPMD 0.100062843053361 0.361570270398837 -0.354 -0.101 21.1499174191294 5.86131695646415 -0.354 -0.101 0.00767376080839486 0.259339282130923 -4.13019697202813 -1.25952552178604 Q86W56 BPHL Q86W56.S298.p_BPHL Q86W56_S298sS302s_2_2_298_302 Q86W56 Q86W56|Q86W56-2|Q86W56-3 Poly(ADP-ribose) glycohydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20296.20296.4 14.58 14.58 3.737 5 2 2 0 971.9431 3724.7925 S298s S302s TMT10 284 (R) QESCLGNSPPFEKEsEPEsPMDVDNSK (N) Q(0.0)ES(0.0)CLGN(0.0)S(0.0)PPFEKES(0.99)EPES(0.99)PM(0.0)DVDN(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PARG 112534.8 1 14 855.1 211.13 HUMAN 1 -21.1499 -5.8613 SPPHRICSFEEAKGL-p P16298-4;S479-p SPPHRICSFEEAKGL 0.990017792455056 0.14937118430965 0.002 -0.183666666666667 0.0902638996998774 10.8678418122029 0.002 -0.183666666666667 0.979430468359644 0.0818871618007833 0.0269961272579743 -2.13202415957124 P16298 PPP3CB P16298.4.S479.p_PPP3CB P16298-4_S479s _1_1_479_479 P16298-4 P16298-4|P16298-3 Isoform 4 of Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10993.10993.2 10.1 9.3 99 1 1 1 0 646.7943 1212.6132 S479s Hydrogen 477 (R) ICsFEEAK (G) ICS(1.0)FEEAK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S PPP3CB 59807 2 2 3004.2 63.48 HUMAN 1 0.0903 -10.8678 SPPIKKYSPPSPGVQ-p P57682;S108-p SPPIKKYSPPSPGVQ 0.816364272823367 0.68538845943683 0.061 0.0596666666666667 1.69202551861914 2.24602835719136 0.061 0.0596666666666667 0.677325534113894 0.596207128428676 0.439464613863581 0.562554431775271 P57682 KLF3 P57682.S108.p_KLF3 P57682_S108sS111s_2_2_108_111 P57682 P57682|P57682-2 Krueppel-like factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36718.36718.4 19.61 16.71 1.56 5 2 2 0 875.6975 3339.8362 S108s S111s TMT10 106 (K) KYsPPsPGVQPFGVPLSMPPVMAAALSR (H) KY(0.0)S(0.99)PPS(0.99)PGVQPFGVPLS(0.0)MPPVMAAALS(0.0)R K:TMT10,s:Phosphorylated S KLF3 39170.3 2 29 394.2 330.8 HUMAN 1 1.692 2.246 SPPLRSASDNTLVAM-p Q14451;S368-p SPPLRSASDNTLVAM 0.30577989567099 0.676102449044164 -0.160333333333333 0.0483333333333334 9.64533795495863 2.32179889210916 -0.160333333333333 0.0483333333333334 0.108509110780717 0.585895430373575 -1.92015391502346 0.57887218848237 Q14451 GRB7 Q14451.S368.p_GRB7 Q14451_S368s _1_1_368_368 Q14451 Q14451-3|Q14451-4|Q14451-2 Growth factor receptor-bound protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17554.17554.3 17.8 14.4 1.122 4 1 1 0 715.6586 2064.997 S368s TMT10 366 (R) SAsDNTLVAMDFSGHAGR (V) S(0.0)AS(0.99)DNT(0.0)LVAMDFS(0.0)GHAGR s:Phosphorylated S GRB7 60535.8 2 7 1698.1 120.33 HUMAN 1 -9.6453 2.3218 SPPPAAPSPLPRAGK-p Q8WV28;S243-p SPPPAAPSPLPRAGK 0.751959847799119 0.0511375493744454 0.049 -0.234333333333333 2.36125099597075 17.2407216575632 0.049 -0.234333333333333 0.580597150989812 0.0188767765180129 0.587396487283871 -3.30763325898279 Q8WV28 BLNK Q8WV28.S243.p_BLNK Q8WV28_S243s _1_1_243_243 Q8WV28 Q8WV28|Q8WV28-2|Q8WV28-3|Q2MD59 B-cell linker protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12359.12359.2 11.54 7.13 1.465 2 1 1 0 748.3962 1415.8208 S243s TMT10 236 (K) SPPPAAPsPLPR (A) S(0.0)PPPAAPS(0.99)PLPR s:Phosphorylated S BLNK 50636.6 3 7 1637.1 124.96 HUMAN 1 2.3613 -17.2407 SPPPAPGTPKANGSQ-p J3KR72;T717-p SPPPAPGTPKANGSQ 0.651183474642633 0.829466296144379 0.102 -0.0286666666666666 3.49200494378366 1.13476317644339 0.102 -0.0286666666666666 0.447506662628937 0.770058434990586 0.818688821285268 -0.307318075551473 J3KR72 NotFound J3KR72.T717.p_NotFound J3KR72_T717t _1_1_717_717 J3KR72 J3KR72|P49848-3|P49848-2 Transcription initiation factor TFIID subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8778.8778.3 12.71 12.71 3.632 2 1 1 0 663.0031 1907.0275 T717t TMT10 705 (K) QEAGDSPPPAPGtPK (A) QEAGDS(0.0)PPPAPGT(0.99)PK K:TMT10,t:Phosphorylated T TAF6 79746 1 5 2409.1 84.76 HUMAN 1 3.492 -1.1348 SPPPFAPSPTLPPTF-p Q5TC82;S779-p SPPPFAPSPTLPPTF 0.898896426785364 0.110506057626177 -0.0203333333333333 -0.177 0.904604483551761 12.6300866959497 -0.0203333333333333 -0.177 0.811969192437445 0.0545746966519555 -0.249775261415295 -2.44332406859251 Q5TC82 RC3H1 Q5TC82.S779.p_RC3H1 Q5TC82_S772sS779s_2_2_772_779 Q5TC82 Q5TC82|Q5TC82-2 Roquin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.33950.34151.4 14.88 14.88 1.246 4 2 2 0 1024.0308 3933.1657 S772s S779s TMT10 769 (R) KVIsPPPFAPsPTLPPTFHPEEFLDEDLK (V) KVIS(0.99)PPPFAPS(0.99)PT(0.0)LPPT(0.0)FHPEEFLDEDLK K:TMT10,s:Phosphorylated S RC3H1 126704 5 5 2236.1 92.29 HUMAN 1 -0.9046 -12.6301 SPPPKARSNENLDKI-p Q96QD9;S23-p SPPPKARSNENLDKI 0.129367933717424 0.0159667122347005 -0.27 -0.371666666666667 18.3985726539882 24.8284902575762 -0.27 -0.371666666666667 0.0144591490498086 0.00328965969783131 -3.54338261669709 -4.99429153933574 Q96QD9 FYTTD1 Q96QD9.S23.p_FYTTD1 Q96QD9_S23s _1_1_23_23 Q96QD9 Q96QD9|Q96QD9-4|H9KVD1 UAP56-interacting factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29139.29139.3 19.35 16.12 8.376 2 1 1 0 834.4264 2421.2947 S23s Hydrogen 23 (R) sNENLDKIDMSLDDIIK (L) S(0.99)NENLDKIDMS(0.0)LDDIIK K:TMT10-Lys-Only,s:Phosphorylated S FYTTD1 35874.8 17 2 2115.1 96.99 HUMAN 1 -18.3986 -24.8285 SPPPKRRTASPPPPP-p A9Z1X7;T623-p SPPPKRRTASPPPPP 0.87463617951721 0.149873861666532 0.0243333333333333 0.173 1.13809219171565 10.8463332013864 0.0243333333333333 0.173 0.769468385121337 0.0822937172095476 0.308167501888761 2.12826533200457 A9Z1X7 NotFound A9Z1X7.T623.p_NotFound A9Z1X7_T623tS625s_2_2_623_625 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4775.4981.3 12.84 12.84 99 2 2 2 0 607.9908 1662.0215 T623t S625s TMT10 621 (K) RRtAsPPPPPK (R) RRT(1.0)AS(1.0)PPPPPK K:TMT10,t:Phosphorylated T,s:Phosphorylated S SRRM1 103445.7 44 65 8.1 1346.57 HUMAN 1 1.1381 10.8463 SPPRHELSPPQKRMR-p Q9BXP5;S74-p SPPRHELSPPQKRMR 0.222950846286183 0.831268575363593 0.370333333333333 -0.0736666666666667 12.5339953923427 1.12319602145713 0.370333333333333 -0.0736666666666667 0.0557956653447258 0.772112170025388 2.42742458838416 -0.304471121695041 Q9BXP5 SRRT Q9BXP5.S74.p_SRRT Q9BXP5_S74s _1_1_74_74 Q9BXP5 Q9BXP5|Q9BXP5-3|Q9BXP5-2|Q9BXP5-4|Q9BXP5-5 Serrate RNA effector molecule homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6203.6203.3 11.92 11.92 99 1 1 1 0 543.9672 1549.9215 S74s TMT10 71 (R) HELsPPQKR (M) HELS(1.0)PPQKR K:TMT10,s:Phosphorylated S SRRT 101121.1 5 5 321.1 364.45 HUMAN 1 12.534 -1.1232 SPPRTLHSPPLQLQQ-p Q6PFW1;S1152-p SPPRTLHSPPLQLQQ 0.605173265345025 0.814433303670634 0.073 -0.023 4.03095766864902 1.24761407897861 0.073 -0.023 0.395279446850503 0.750306298362679 0.923042580606175 -0.334852076455155 Q6PFW1 PPIP5K1 Q6PFW1.S1152.p_PPIP5K1 Q6PFW1_S1152s _1_1_1152_1152 Q6PFW1 Q6PFW1|Q6PFW1-2|B7WPL9|F8W9A8|Q6PFW1-3|Q6PFW1-4|Q6PFW1-7 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13586.13788.3 18.78 17.26 4.32 2 1 1 0 576.3115 1646.954 S1152s TMT10 1149 (R) TLHsPPLQLQQR (S) T(0.0)LHS(0.99)PPLQLQQR s:Phosphorylated S PPIP5K1 161343.9 7 8 1248.1 162.13 HUMAN 1 4.031 -1.2476 SPPSGLWSPAYASH_-p Q8TEM1;S1881-p SPPSGLWSPAYASH_ 0.706325468624497 0.0166553259983882 0.0523333333333333 -0.350333333333333 2.8393448206304 24.556332615249 0.0523333333333333 -0.350333333333333 0.520074449372107 0.00350240801822197 0.687588150796973 -4.92627314759306 Q8TEM1 NUP210 Q8TEM1.S1881.p_NUP210 Q8TEM1_S1877sS1881s_2_2_1877_1881 Q8TEM1 Q8TEM1 Nuclear pore membrane glycoprotein 210 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20096.20298.3 15.09 15.09 1.219 5 2 2 0 758.6971 2114.1435 S1877s S1881s TMT10 1872 (R) KASPPsGLWsPAYASH (-) KAS(0.0)PPS(0.99)GLWS(0.99)PAY(0.0)AS(0.0)H K:TMT10,s:Phosphorylated S NUP210 206020.3 4 3 4157.1 36.52 HUMAN 1 2.8393 -24.5563 SPPSPPHTDPELELV-p Q9Y618;T156-p SPPSPPHTDPELELV 0.39901938589383 0.112380248467204 0.138 0.167 7.36146760062389 12.5221686023156 0.138 0.167 0.183591783132869 0.0559478162391003 1.52414955650408 2.42403818217116 Q9Y618 NCOR2 Q9Y618.T156.p_NCOR2 Q9Y618_S149sS152sT156t_3_3_149_156 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26556.26556.4 12.95 12.95 5.485 5 3 3 0 840.4055 3118.6986 S149s S152s T156t Hydrogen 140 (R) SLTGKLEPVsPPsPPHtDPELELVPPR (L) S(0.0)LT(0.0)GKLEPVS(0.99)PPS(0.99)PPHT(0.99)DPELELVPPR K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T NCOR2 275540.8 3 49 16.1 1053.89 HUMAN 1 7.3615 12.5222 SPPSRDLSPTLIDNS-p Q9P2B4;S488-p SPPSRDLSPTLIDNS 0.377007280567508 0.921851085677896 -0.159333333333333 -0.0116666666666666 7.8290190920104 0.496706484274589 -0.159333333333333 -0.0116666666666666 0.164853469150042 0.891927083562587 -1.60548532848407 -0.142372100607362 Q9P2B4 CTTNBP2NL Q9P2B4.S488.p_CTTNBP2NL Q9P2B4_S488s _1_1_488_488 Q9P2B4 Q9P2B4 CTTNBP2 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18830.18830.3 9.23 7.44 1.892 3 1 1 0 551.9484 1573.8635 S488s Hydrogen 486 (R) DLsPTLIDNSAAK (Q) DLS(0.99)PT(0.0)LIDNS(0.0)AAK K:TMT10-Lys-Only,s:Phosphorylated S CTTNBP2NL 70613.2 3 2 1031.1 186 HUMAN 1 -7.829 -0.4967 SPPVQPHTPVTISLG-p Q96ST3;T284-p SPPVQPHTPVTISLG 0.379392937735762 0.72600282490504 0.149 0.038 7.77632038346007 1.91377006506752 0.149 0.0380000000000001 0.166866040804785 0.643610311545514 1.59633260397019 0.489564023888401 Q96ST3 SIN3A Q96ST3.T284.p_SIN3A Q96ST3_T284t _1_1_284_284 Q96ST3 Q96ST3 Paired amphipathic helix protein Sin3a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24286.24286.5 19.42 15.9 2.169 7 1 1 0 910.2775 4467.3825 T284t TMT10 277 (R) SPPVQPHtPVTISLGTAPSLQNNQPVEFNHAINYVNK (I) S(0.0)PPVQPHT(0.99)PVT(0.0)IS(0.0)LGT(0.0)APS(0.0)LQNNQPVEFNHAINY(0.0)VNK K:TMT10,t:Phosphorylated T SIN3A 145971.2 2 7 501.1 291.36 HUMAN 1 7.7763 1.9138 SPQERSESDSSPDSK-p Q9UQ35;S1559-p SPQERSESDSSPDSK 0.390105099545893 0.168211006739333 -0.147666666666667 0.281666666666667 7.55970816402304 10.1834087734306 -0.147666666666667 0.281666666666667 0.175399836256734 0.0958647894284612 -1.55867435606685 2.01276278863024 Q9UQ35 SRRM2 Q9UQ35.S1559.p_SRRM2 Q9UQ35_S1559s _1_1_1559_1559 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5615.5615.2 10.04 10.04 1.315 5 1 1 0 788.8615 1496.7481 S1559s TMT10 1557 (R) SEsDSSPDSK (A) S(0.0)ES(0.99)DS(0.0)S(0.0)PDS(0.0)K K:TMT10,s:Phosphorylated S SRRM2 300351.7 3 103 2.1 3310.34 HUMAN 1 -7.5597 10.1834 SPQKNRQSDENNLKD-p Q9H6K1;S222-p SPQKNRQSDENNLKD 0.971444785466597 0.00544848158522519 -0.00533333333333334 -0.545333333333333 0.245458629586393 32.8480288862637 -0.00533333333333334 -0.545333333333333 0.945048586860169 0.000519035557920235 -0.0721838378524103 -7.33457167625245 Q9H6K1 C6orf106 Q9H6K1.S222.p_C6orf106 Q9H6K1_S222s _1_1_222_222 Q9H6K1 Q9H6K1|Q9H6K1-2|Q5TH58 Uncharacterized protein C6orf106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14385.14385.5 14.56 10.6 4.315 4 1 1 0 641.7222 3124.6114 S222s TMT10 219 (K) NRQsDENNLKDPGGSEFDSISK (N) NRQS(0.99)DENNLKDPGGS(0.0)EFDS(0.0)IS(0.0)K K:TMT10,s:Phosphorylated S C6orf106 33156.3 3 2 2462.1 82.34 HUMAN 1 -0.2455 -32.848 SPQKTRQSPQTLKRS-p Q8IV63;S136-p SPQKTRQSPQTLKRS 0.148266672319898 0.00379685727719789 -0.348333333333333 -0.667333333333333 16.7516882217952 35.8805937278067 -0.348333333333333 -0.667333333333334 0.021126676283285 0.000258190719170226 -3.21388636226478 -8.42410892135654 Q8IV63 VRK3 Q8IV63.S136.p_VRK3 Q8IV63_S136s _1_1_136_136 Q8IV63 Q8IV63|Q8IV63-3|Q8IV63-2|M0QYA8|M0R073|M0QYG0|M0R200 Inactive serine/threonine-protein kinase VRK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4329.4329.4 8.45 4.97 1.375 3 1 1 0 439.0032 1673.0223 S136s TMT10 133 (K) TRQsPQTLKR (S) T(0.0)RQS(0.99)PQT(0.0)LKR K:TMT10,s:Phosphorylated S VRK3 53622 6 6 387.2 332.82 HUMAN 1 -16.7517 -35.8806 SPQNDDHSDTDSEEN-p Q86W56;S197-p SPQNDDHSDTDSEEN 0.640962870314288 0.697231185397991 -0.102 0.0863333333333333 3.60678412886817 2.15305075947441 -0.102 0.0863333333333333 0.435834481682997 0.609108870276525 -0.841177917925612 0.542370859025456 Q86W56 BPHL Q86W56.S197.p_BPHL Q86W56_S197s _1_1_197_197 Q86W56 Q86W56|Q86W56-2|Q86W56-3 Poly(ADP-ribose) glycohydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12880.12880.4 25.02 25.02 3.668 6 1 1 0 890.408 3478.6359 S197s TMT10 190 (R) SPQNDDHsDTDSEENRDNQQFLTTVK (L) S(0.0)PQNDDHS(0.99)DT(0.0)DS(0.0)EENRDNQQFLT(0.0)T(0.0)VK K:TMT10,s:Phosphorylated S PARG 112534.8 2 4 855.1 211.13 HUMAN 1 -3.6068 2.1531 SPQPAPASPRDSLAL-p Q86YN6;S263-p SPQPAPASPRDSLAL 0.0482466396076474 0.108319423603399 -0.66 -0.399 29.1933633211074 12.75326697346 -0.66 -0.399 0.00120410308167153 0.05304852374068 -6.19040763337959 -2.46537848686336 Q86YN6 PPARGC1B Q86YN6.S263.p_PPARGC1B Q86YN6_S256sS263s_2_2_256_263 Q86YN6 Q86YN6|Q86YN6-3|Q86YN6-2 Peroxisome proliferator-activated receptor gamma coactivator 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12489.12489.4 14.64 14.64 99 2 2 2 0 855.9201 3260.7188 S256s S263s TMT10 242 (R) LPAKEDKEPGEDCPsPQPAPAsPR (D) LPAKEDKEPGEDCPS(1.0)PQPAPAS(1.0)PR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PPARGC1B 115103.2 1 3 3638.1 46.37 HUMAN 1 -29.1934 -12.7533 SPQQGGATPQVPSPC-p Q9H4L4;T176-p SPQQGGATPQVPSPC 0.207422631751664 0.101598887859872 0.328333333333333 0.183666666666667 13.1932024976945 13.1205864847267 0.328333333333333 0.183666666666667 0.047937982246501 0.0487462657190518 2.54593996855847 2.53141451639282 Q9H4L4 SENP3 Q9H4L4.T176.p_SENP3 Q9H4L4_S169sT176tS188s_3_3_169_188 Q9H4L4 Q9H4L4|A0A087X0R7 Sentrin-specific protease 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13501.13501.4 10.75 10.75 1.235 4 3 3 0 966.6781 3623.791 S169s T176t S188s TMT10 166 (K) NHLsPQQGGAtPQVPSPCCRFDsPRGPPPPR (L) NHLS(0.99)PQQGGAT(0.99)PQVPS(0.0)PCCRFDS(0.99)PRGPPPPR C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T SENP3 65636.2 1 12 396.1 329.46 HUMAN 1 13.1932 13.1206 SPQQVLPSPDGRRAA-p P22570-3;S360-p SPQQVLPSPDGRRAA 0.763141661065271 0.0257729799287224 0.05 0.293666666666667 2.2490562069883 21.6072703120409 0.05 0.293666666666667 0.595791604731467 0.00690673779312351 0.563277212301314 4.2283264401094 P22570 FDXR P22570.3.S360.p_FDXR P22570-3_S360s _1_1_360_360 P22570-3 P22570-3|A0A0A0MT64|P22570-7|A0A0A0MSZ4|P22570-2|A0A0C4DGN7|A0A0C4DFN8|P22570-5|A0A0A0MTR6|J3QQX3|P22570-6|P22570-4|A0A0A0MTN9 Isoform 3 of NADPH:adrenodoxin oxidoreductase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9197.9407.3 10.74 10.74 10.745 2 1 1 0 582.635 1665.9234 S360s TMT10 353 (R) SPQQVLPsPDGRR (A) S(0.0)PQQVLPS(0.99)PDGRR s:Phosphorylated S FDXR 58873.2 4 2 4168.1 36.29 HUMAN 1 2.2491 21.6073 SPQRFPESPKRFCPA-p Q6UB99;S1990-p SPQRFPESPKRFCPA 0.723549346541261 0.673938544852609 -0.0643333333333333 -0.046 2.66025127785338 2.34208875934222 -0.0643333333333334 -0.046 0.541969531753048 0.583164561129415 -0.650518364726662 -0.583222429456326 Q6UB99 ANKRD11 Q6UB99.S1990.p_ANKRD11 Q6UB99_S1990s _1_1_1990_1990 Q6UB99 Q6UB99 Ankyrin repeat domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8984.9189.3 10.04 5.54 6.091 2 1 1 0 570.9714 1630.9317 S1990s TMT10 1983 (K) SPQRFPEsPK (R) S(0.0)PQRFPES(0.99)PK K:TMT10,s:Phosphorylated S ANKRD11 299790.8 1 24 340.1 353.72 HUMAN 1 -2.6603 -2.3421 SPQRRGRSRSPQRPG-p Q9UQ35;S534-p SPQRRGRSRSPQRPG 0.495901315517715 0.00586881276858094 0.151666666666667 0.660333333333333 5.60911424163403 32.2443978327182 0.151666666666667 0.660333333333333 0.274845465261631 0.000596431011730603 1.21460338037797 7.13270328315131 Q9UQ35 SRRM2 Q9UQ35.S534.p_SRRM2 Q9UQ35_S534sS536s_2_2_534_536 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4534.4534.3 12.24 12.24 12.237 3 2 2 0 491.8775 1313.6821 S534s S536s Hydrogen 534 (R) sRsPQRPGWSR (S) S(0.99)RS(0.99)PQRPGWS(0.0)R s:Phosphorylated S SRRM2 300351.7 15 181 2.1 3310.34 HUMAN 1 5.6091 32.2444 SPQSGCPSPTIPAGK-p Q76L83;S146-p SPQSGCPSPTIPAGK 0.385631573417695 0.179221418469082 0.139 0.134666666666667 7.66005415899131 9.81776489346362 0.139 0.134666666666667 0.171393593361951 0.104285399851625 1.57612742334191 1.94929455494909 Q76L83 ASXL2 Q76L83.S146.p_ASXL2 Q76L83_S146s _1_1_146_146 Q76L83 Q76L83|E7EWD6 Putative Polycomb group protein ASXL2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13197.13197.3 18.42 12.12 1.574 7 1 1 0 794.7323 2302.2113 S146s TMT10 135 (K) VSSSSPQSGCPsPTIPAGK (V) VS(0.0)S(0.0)S(0.0)S(0.0)PQS(0.0)GCPS(0.99)PT(0.0)IPAGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ASXL2 155129.4 4 2 293.1 380.51 HUMAN 1 7.6601 9.8178 SPQVDINSPINAKKV-p O94915;S844-p SPQVDINSPINAKKV 0.283177951218012 0.856395016829733 -0.17 0.026 10.3571876886373 0.949022870497724 -0.17 0.026 0.0921045809838259 0.803706929781721 -2.04384028261659 0.261016477154373 O94915 FRYL O94915.S844.p_FRYL O94915_S844s _1_1_844_844 O94915 O94915|F2Z2S2 Protein furry homolog-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29351.29351.3 16.75 16.75 4.644 2 1 1 0 796.7809 2308.3641 S844s TMT10 833 (R) LQLLSPQVDINsPINAK (K) LQLLS(0.0)PQVDINS(0.99)PINAK K:TMT10,s:Phosphorylated S FRYL 342387.4 4 4 526.1 282.44 HUMAN 1 -10.3572 0.949 SPQVTRGSPQKTSCS-p Q8IV63;S122-p SPQVTRGSPQKTSCS 0.0977397848374227 0.0271669948321718 -0.535666666666667 -0.318333333333333 21.3786550569892 21.2483773286622 -0.535666666666667 -0.318333333333333 0.00728005221616955 0.00750174447567964 -4.18127140153461 -4.14794168064793 Q8IV63 VRK3 Q8IV63.S122.p_VRK3 Q8IV63_S122s _1_1_122_122 Q8IV63 Q8IV63|Q8IV63-3|Q8IV63-2|M0QYA8|M0R073|M0QYG0|M0R200 Inactive serine/threonine-protein kinase VRK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5055.5055.4 11.14 6.93 3.917 3 1 1 0 520.8026 2000.222 S122s TMT10 114 (R) KSPQVTRGsPQK (T) KS(0.0)PQVT(0.0)RGS(0.99)PQK K:TMT10,s:Phosphorylated S VRK3 53622 7 5 387.2 332.82 HUMAN 1 -21.3787 -21.2484 SPRAADKSPESQNLI-p Q9HCE3;S314-p SPRAADKSPESQNLI 0.212104830147024 0.176940003118073 -0.353 0.241 13.000439685549 9.89301631989427 -0.353 0.241 0.0501136495329062 0.102493982412937 -2.51114615193628 1.96234558675066 Q9HCE3 ZNF532 Q9HCE3.S314.p_ZNF532 Q9HCE3_S314s _1_1_314_314 Q9HCE3 Q9HCE3 Zinc finger protein 532 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13604.13604.4 16.29 16.29 1.39 3 1 1 0 611.078 2361.3229 S314s TMT10 310 (R) AADKsPESQNLIDGTK (K) AADKS(0.99)PES(0.0)QNLIDGT(0.0)K K:TMT10,s:Phosphorylated S ZNF532 144089.8 4 4 397.1 329.01 HUMAN 1 -13.0004 9.893 SPRAALSSSELLELG-p Q9P2G1;S912-p SPRAALSSSELLELG 0.306175262925957 0.368259510898272 -0.151 -0.102333333333333 9.63463665393757 5.75282246270944 -0.151 -0.102333333333333 0.108776814033864 0.265899642685298 -1.9182982336715 -1.24011931744821 Q9P2G1 ANKIB1 Q9P2G1.S912.p_ANKIB1 Q9P2G1_S912s _1_1_912_912 Q9P2G1 Q9P2G1 Ankyrin repeat and IBR domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.34665.34665.2 13.24 13.24 1.14 4 1 1 0 1051.026 2021.0786 S912s TMT10 908 (R) AALSsSELLELGDSLMR (L) AALS(0.0)S(0.99)S(0.0)ELLELGDS(0.0)LMR s:Phosphorylated S ANKIB1 124110.4 2 10 1291.1 157.55 HUMAN 1 -9.6346 -5.7528 SPRAILGSYRKKRKN-p I3L2J0;S2295-p SPRAILGSYRKKRKN 0.0393571829548896 0.00381170327505487 -0.553666666666667 -0.808666666666667 31.6667257905718 35.8450803106525 -0.553666666666667 -0.808666666666667 0.000681282794159207 0.000260310669373051 -6.95569939277767 -8.41058049601739 I3L2J0 NotFound I3L2J0.S2295.p_NotFound I3L2J0_S2295s _1_1_2295_2295 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13469.13469.3 8.45 8.45 8.446 2 1 1 0 482.615 1365.8618 S2295s TMT10 2291 (R) AILGsYRK (K) AILGS(0.99)Y(0.0)RK K:TMT10,s:Phosphorylated S CIC 259056.7 1 40 23.1 999.57 HUMAN 1 -31.6667 -35.8451 SPRDDGYSTKDSYSS-p P38159;S215-p SPRDDGYSTKDSYSS 0.220753787202438 0.552700368180615 0.249 0.0606666666666667 12.6326541520592 3.46743894339528 0.249 0.0606666666666667 0.0545424427931288 0.450045170578131 2.4450790504147 0.813730555848383 P38159 RBMX P38159.S215.p_RBMX P38159_S215s _1_1_215_215 P38159 P38159|Q96E39|P38159-2|H3BT71|H3BUY5 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12986.12986.4 14.67 14.67 1.159 9 1 1 0 713.0894 2769.3732 S215s TMT10 204 (R) DVYLSPRDDGYsTKDSYSSR (D) DVY(0.0)LS(0.0)PRDDGY(0.0)S(0.99)T(0.0)KDS(0.0)Y(0.0)S(0.0)S(0.0)R K:TMT10,s:Phosphorylated S RBMX 42331.1 9 16 102.1 595.29 HUMAN 1 12.6327 3.4674 SPRDKAITPPLPEST-p Q92667;T533-p SPRDKAITPPLPEST 0.58813607527305 0.033166063072608 -0.0973333333333333 0.289666666666667 4.24490835511877 19.9464165692754 -0.0973333333333334 0.289666666666667 0.376278292413683 0.0101241446850714 -0.963664031639209 3.86385700308309 Q92667 AKAP1 Q92667.T533.p_AKAP1 Q92667_T533t _1_1_533_533 Q92667 Q92667 A-kinase anchor protein 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32879.32879.5 22.88 20.12 4.171 8 1 1 0 1033.6986 5084.4835 T533t TMT10 531 (K) AItPPLPESTVPFSNGVLKGELSDLGAEDGWTMDAEADHSGGSDR (N) AIT(0.99)PPLPES(0.0)T(0.0)VPFS(0.0)NGVLKGELS(0.0)DLGAEDGWT(0.0)MDAEADHS(0.0)GGS(0.0)DR K:TMT10,t:Phosphorylated T AKAP1 98309.7 12 7 1004.1 189.36 HUMAN 1 -4.2449 19.9464 SPRFEPESPGFESRS-p Q9H5H4;S83-p SPRFEPESPGFESRS 0.632464430366418 0.0953576618527079 0.119333333333333 0.362666666666667 3.70667939634367 13.4995743759782 0.119333333333333 0.362666666666667 0.425923948945161 0.0446727370875164 0.8606287284647 2.5999967342735 Q9H5H4 ZNF768 Q9H5H4.S83.p_ZNF768 Q9H5H4_S83s _1_1_83_83 Q9H5H4 Q9H5H4|H3BS42 Zinc finger protein 768 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15980.15980.3 10.12 10.12 10.121 2 1 1 0 530.9055 1510.7375 S83s TMT10 79 (R) FEPEsPGFESR (S) FEPES(0.99)PGFES(0.0)R s:Phosphorylated S ZNF768 61482.8 2 134 240.2 415.72 HUMAN 1 3.7067 13.4996 SPRGGPGSGGHGPLR-p Q8N1G0;S1106-p SPRGGPGSGGHGPLR 0.807745252895015 0.0734965950336913 0.0343333333333333 -0.430333333333333 1.78146352458101 15.052301069866 0.0343333333333333 -0.430333333333334 0.663519433979714 0.0312442348108184 0.459842615274526 -2.8863745085355 Q8N1G0 ZNF687 Q8N1G0.S1106.p_ZNF687 Q8N1G0_S1106s _1_1_1106_1106 Q8N1G0 Q8N1G0 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4573.4573.2 12.82 12.82 99 1 1 1 0 679.3324 1277.6912 S1106s TMT10 1102 (R) GGPGsGGHGPLR (Y) GGPGS(1.0)GGHGPLR s:Phosphorylated S ZNF687 131979.7 2 18 156.1 501.88 HUMAN 1 1.7815 -15.0523 SPRGKSRSPAPPADK-p Q9Y618;S1025-p SPRGKSRSPAPPADK 0.202846697385928 0.559006029167553 -0.494 0.0613333333333333 13.4376116690322 3.40598067640095 -0.494 0.0613333333333333 0.0453146711964483 0.456459165936849 -2.59022933865996 0.801609764490773 Q9Y618 NCOR2 Q9Y618.S1025.p_NCOR2 Q9Y618_S1025s _1_1_1025_1025 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4650.4650.2 11.23 11.23 1.101 2 1 1 0 782.4182 1483.8633 S1025s TMT10 1023 (K) SRsPAPPADK (E) S(0.0)RS(0.99)PAPPADK K:TMT10,s:Phosphorylated S NCOR2 275540.8 5 13 16.1 1053.89 HUMAN 1 -13.4376 3.406 SPRGLSHSPWAVKKI-p Q96KB5-2;S59-p SPRGLSHSPWAVKKI 0.515501634733556 0.0124619603980261 -0.091 -0.625 5.31427392479955 26.5747629884156 -0.091 -0.625 0.294152543155012 0.00220051179694638 -1.16135126001383 -5.44663151193557 Q96KB5 PBK Q96KB5.2.S59.p_PBK Q96KB5-2_S59s _1_1_59_59 Q96KB5-2 Q96KB5-2 Isoform 2 of Lymphokine-activated killer T-cell-originated protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14921.14921.3 14.69 14.69 3.821 2 1 1 0 540.6284 1539.9048 S59s TMT10 55 (R) GLSHsPWAVK (K) GLS(0.0)HS(0.99)PWAVK K:TMT10,s:Phosphorylated S PBK 37553.1 5 6 2474.1 81.89 HUMAN 1 -5.3143 -26.5748 SPRGTEASPPQNNSG-p Q9P1Y5;S341-p SPRGTEASPPQNNSG 0.683813405374229 0.465464455074469 0.0546666666666667 0.0833333333333333 3.09441017192961 4.42869498835219 0.0546666666666667 0.0833333333333333 0.490409622238051 0.360687009592019 0.739523693087781 0.998055497383395 Q9P1Y5 CAMSAP3 Q9P1Y5.S341.p_CAMSAP3 Q9P1Y5_S341s _1_1_341_341 Q9P1Y5 Q9P1Y5-2 Calmodulin-regulated spectrin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18764.18764.3 18.76 15.24 3.218 7 1 1 0 826.0507 2396.168 S341s TMT10 337 (R) GTEAsPPQNNSGSSSPVFTFR (H) GT(0.0)EAS(0.99)PPQNNS(0.0)GS(0.0)S(0.0)S(0.0)PVFT(0.0)FR s:Phosphorylated S CAMSAP3 135546 3 4 217.1 432.4 HUMAN 1 3.0944 4.4287 SPRHRTHSLCNGDSP-p Q674X7-3;S340-p SPRHRTHSLCNGDSP 0.468420595180194 0.182735211952684 0.14 0.139333333333333 6.08283992674268 9.71051707633488 0.14 0.139333333333333 0.246442727858742 0.106892760381494 1.2993074108845 1.93070292483294 Q674X7 KAZN Q674X7.3.S340.p_KAZN Q674X7-3_S340sS346s_2_2_340_346 Q674X7-3 A0A1B0GWK2|Q674X7|Q674X7-2|Q674X7-3|Q674X7-4 Isoform 3 of Kazrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10132.10132.3 13.98 12.67 2.301 3 2 2 0 739.0053 2055.0693 S340s S346s TMT10 338 (R) THsLCNGDsPGPVQK (N) T(0.0)HS(0.99)LCNGDS(0.99)PGPVQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KAZN 46553.4 2 5 3086.1 61.12 HUMAN 1 6.0828 9.7105 SPRKCISSPNTPKAK-p Q86XJ1;S438-p SPRKCISSPNTPKAK 0.745870020101886 0.00319184557443355 -0.0493333333333333 -0.788666666666667 2.41730414897192 37.4553279649636 -0.0493333333333333 -0.788666666666667 0.573151700283852 0.000179666539676618 -0.599354731069752 -9.04364391535409 Q86XJ1 GAS2L3 Q86XJ1.S438.p_GAS2L3 Q86XJ1_S438s _1_1_438_438 Q86XJ1 Q86XJ1|G3V1N3 GAS2-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9545.9545.2 10.78 10.78 1.373 3 1 1 0 771.3934 1461.8136 S438s TMT10 435 (K) CISsPNTPK (A) CIS(0.0)S(0.99)PNT(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GAS2L3 76068.8 1 5 1750.1 117.59 HUMAN 1 -2.4173 -37.4553 SPRKLPTSLKKGERK-p Q9UIG0;S204-p SPRKLPTSLKKGERK 0.108085133456159 0.00250569171358946 -0.816333333333333 -0.857333333333333 20.3156036409364 39.7619861529471 -0.816333333333333 -0.857333333333333 0.009299072547422 0.000105633430682347 -3.94701206427282 -10.0248175430846 Q9UIG0 BAZ1B Q9UIG0.S204.p_BAZ1B Q9UIG0_S204s _1_1_204_204 Q9UIG0 Q9UIG0|Q9UIG0-2 Tyrosine-protein kinase BAZ1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15160.15160.3 7.41 7.41 7.407 2 1 1 0 518.659 1473.9972 S204s TMT10 200 (R) KLPTsLK (K) KLPT(0.0)S(0.99)LK K:TMT10,s:Phosphorylated S BAZ1B 172497.3 1 3 370.1 339.44 HUMAN 1 -20.3156 -39.762 SPRLPRHSSLIDEMF-p A0A1B0GV68;S582-p SPRLPRHSSLIDEMF 0.16550315241392 0.149414951986032 -0.469333333333333 0.349 15.6351248021607 10.865377034156 -0.469333333333333 0.349 0.0273204293268974 0.0819336489130846 -2.99843980519289 2.13159337677221 A0A1B0GV68 NotFound A0A1B0GV68.S582.p_NotFound A0A1B0GV68_S582sS583s_2_2_582_583 A0A1B0GV68 A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25412.25412.3 7.98 7.98 99 2 2 2 0 731.0308 2031.1461 S582s S583s TMT10 578 (R) LPRHssLIDEMFK (G) LPRHS(1.0)S(1.0)LIDEMFK K:TMT10,s:Phosphorylated S FARP1 88555.5 1 31 147.1 514.5 HUMAN 1 -15.6351 10.8654 SPRLRLPSPSMDKID-p Q9NQ86-4;S75-p SPRLRLPSPSMDKID 0.879897888357523 0.225020134237897 -0.031 -0.133333333333333 1.09273937381256 8.53176489191418 -0.031 -0.133333333333333 0.777545948234787 0.140224374300981 -0.296982032861293 -1.72672060695082 Q9NQ86 TRIM36 Q9NQ86.4.S75.p_TRIM36 Q9NQ86-4_S75s _1_1_75_75 Q9NQ86-4 Q9NQ86|Q9NQ86-4 Isoform 4 of E3 ubiquitin-protein ligase TRIM36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18259.18259.4 10.12 5.97 2.778 2 1 1 0 517.288 1986.157 S75s TMT10 71 (R) LRLPsPSMDKIDR (I) LRLPS(0.99)PS(0.0)MDKIDR K:TMT10,s:Phosphorylated S TRIM36 83165.6 3 3 1499.1 136.16 HUMAN 1 -1.0927 -8.5318 SPRPSLLTPTGDPRA-p Q9Y618;T946-p SPRPSLLTPTGDPRA 0.806595725807555 0.12675992441163 0.0356666666666667 -0.162666666666667 1.79772268887271 11.825241168123 0.0356666666666667 -0.162666666666667 0.661039986855656 0.0656864639104977 0.463525228187985 -2.3002469821879 Q9Y618 NCOR2 Q9Y618.T946.p_NCOR2 Q9Y618_T946t _1_1_946_946 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98|C9J7T7 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20374.20374.3 13.22 6.65 1.559 4 1 1 0 677.0423 1949.1381 T946t TMT10 937 (R) LLSPRPSLLtPTGDPR (A) LLS(0.0)PRPS(0.0)LLT(0.99)PT(0.0)GDPR t:Phosphorylated T NCOR2 275540.8 2 10 16.1 1053.89 HUMAN 1 1.7977 -11.8252 SPRRFIGSPRTPVSP-p P23443-2;S418-p SPRRFIGSPRTPVSP 0.0431670381948327 0.00377183674542825 -0.639666666666667 -0.731333333333333 30.2664223379136 35.9433804762497 -0.639666666666667 -0.731333333333333 0.00094049776148947 0.000254484861347543 -6.51359446556878 -8.4480735589108 P23443 RPS6KB1 P23443.2.S418.p_RPS6KB1 P23443-2_S418s _1_1_418_418 P23443-2 P23443|P23443-2|P23443-5 Isoform Alpha II of Ribosomal protein S6 kinase beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8276.8276.3 8.5 1.5 99 1 1 1 0 381.2078 1061.6417 S418s TMT10 414 (R) RFIGsPR (T) RFIGS(1.0)PR s:Phosphorylated S RPS6KB1 56530.6 1 6 1663.1 122.57 HUMAN 1 -30.2664 -35.9434 SPRRSRGSPRYSPRH-p J3KTL2;S234-p SPRRSRGSPRYSPRH 0.190312127567691 0.245771649222514 0.387 0.288333333333333 14.0939061476116 8.03304057075018 0.387 0.288333333333333 0.0389591421278956 0.157288127751626 2.71017615399541 1.64036960233 J3KTL2 NotFound J3KTL2.S234.p_NotFound J3KTL2_S234sS238s_2_2_234_238 J3KTL2 J3KTL2|Q07955 Serine/arginine-rich-splicing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5097.5097.3 9.67 7.15 2.792 3 2 2 0 436.8619 1148.6374 S234s S238s TMT10 233 (R) GsPRYsPR (H) GS(0.99)PRY(0.0)S(0.99)PR s:Phosphorylated S SRSF1 28442.8 5 95 8.5 1346.57 HUMAN 1 14.0939 8.033 SPRSDRRSVASSQPA-p G3V1L9;S175-p SPRSDRRSVASSQPA 0.211309876563391 0.153360447404638 -0.208333333333333 -0.193333333333333 13.0315185131688 10.7081164712276 -0.208333333333333 -0.193333333333333 0.0497563081341191 0.0849548843232403 -2.51674794428464 -2.10412915217627 G3V1L9 TJP1 G3V1L9.S175.p_TJP1 G3V1L9_S175s _1_1_175_175 G3V1L9 G3V1L9|Q07157|G5E9E7|A0A087X0K9|Q07157-2 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6139.6139.2 12.05 12.05 3.811 4 1 1 0 869.9797 1658.9841 S175s Hydrogen 175 (R) sVASSQPAKPTK (V) S(0.99)VAS(0.0)S(0.0)QPAKPT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S TJP1 197797.8 3 41 41.2 827.72 HUMAN 1 -13.0315 -10.7081 SPRSITSTPLSGKES-p Q9P0K7;T297-p SPRSITSTPLSGKES 0.019376665224519 0.00408497133584511 -0.836666666666667 -0.873 40.0008138697015 35.1766522941896 -0.836666666666667 -0.873 9.99812617134132e-05 0.000303623072363368 -10.1551979433083 -8.15947339386079 Q9P0K7 RAI14 Q9P0K7.T297.p_RAI14 Q9P0K7_T297tS300s_2_2_297_300 Q9P0K7 Q9P0K7-2|Q9P0K7-3|Q9P0K7-4 Ankycorbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15797.15797.2 7.9 8.23 1.111 5 2 2 0 804.9066 1448.8725 T297t S300s TMT10 293 (R) SITStPLsGK (E) S(0.0)IT(0.0)S(0.0)T(0.99)PLS(0.99)GK K:TMT10,t:Phosphorylated T,s:Phosphorylated S RAI14 110666.9 4 24 498.1 292.24 HUMAN 1 -40.0008 -35.1767 SPRTLSGSSDRDFEK-p A0A1B0GW72;S283-p SPRTLSGSSDRDFEK 0.766173684609334 0.302436677625131 0.0576666666666667 0.101333333333333 2.22013292245412 6.85654793160831 0.0576666666666667 0.101333333333333 0.599772719015184 0.206226849344033 0.557018421360155 1.43549010263751 A0A1B0GW72 NotFound A0A1B0GW72.S283.p_NotFound A0A1B0GW72_S283s _1_1_283_283 A0A1B0GW72 A0A1B0GW72 Pleckstrin homology domain-containing family G member 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11031.11382.3 12.11 12.11 1.173 4 1 1 0 627.3123 1799.954 S283s TMT10 279 (R) TLSGsSDRDFEK (V) T(0.0)LS(0.0)GS(0.99)S(0.0)DRDFEK K:TMT10,s:Phosphorylated S PLEKHG4B 181102.6 2 3 1118.1 175.42 HUMAN 1 2.2201 6.8565 SPRTRARSPEICKMA-p Q1MSJ5;S31-p SPRTRARSPEICKMA 0.62471869465399 0.0234335585962751 -0.097 -0.366333333333333 3.7981826685258 22.2379135925752 -0.097 -0.366333333333333 0.417043861483279 0.0059732217904276 -0.878349985420701 -4.37185944061144 Q1MSJ5 CSPP1 Q1MSJ5.S31.p_CSPP1 Q1MSJ5_S31s _1_1_31_31 Q1MSJ5 Q1MSJ5|Q1MSJ5-1 Centrosome and spindle pole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7031.7031.3 7.25 7.25 99 1 1 1 0 500.2671 1418.819 S31s TMT10 29 (R) ARsPEICK (M) ARS(1.0)PEICK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CSPP1 145804.7 2 2 1677.1 121.74 HUMAN 1 -3.7982 -22.2379 SPRTSFGSLTDSSEE-p Q969H4;S568-p SPRTSFGSLTDSSEE 0.039271926938295 0.0188803065102144 -0.583 -0.492666666666667 31.8310903086158 23.7193095860212 -0.583 -0.492666666666667 0.000655980559848494 0.00424687072652666 -7.00916991038514 -4.72105719268233 Q969H4 CNKSR1 Q969H4.S568.p_CNKSR1 Q969H4_S568s _1_1_568_568 Q969H4 Q969H4|Q969H4-2|G3V160 Connector enhancer of kinase suppressor of ras 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29501.29501.2 14.21 14.21 2.331 6 1 1 0 1163.0312 2245.0856 S568s TMT10 564 (R) TSFGsLTDSSEEALEGMVR (G) T(0.0)S(0.0)FGS(0.99)LT(0.0)DS(0.0)S(0.0)EEALEGMVR s:Phosphorylated S CNKSR1 80560.2 3 7 1912.1 107.86 HUMAN 1 -31.8311 -23.7193 SPRTYRPSRFHNRVS-p O14976;S463-p SPRTYRPSRFHNRVS 0.430974594387657 0.97143340895646 0.161333333333333 0.00466666666666668 6.7319586633049 0.178695975606934 0.161333333333333 0.00466666666666669 0.212228709700021 0.959688747005255 1.41400750259857 0.0529226145817425 O14976 GAK O14976.S463.p_GAK O14976_S463s _1_1_463_463 O14976 O14976 Cyclin-G-associated kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3768.3768.4 11.52 11.52 6.367 3 1 1 0 411.46 1562.8502 S463s TMT10 459 (R) TYRPsRFHNR (V) T(0.0)Y(0.0)RPS(0.99)RFHNR s:Phosphorylated S GAK 144671.4 1 2 746.1 233.2 HUMAN 1 6.732 0.1787 SPRVEEASPGRPSSV-p Q00613;S314-p SPRVEEASPGRPSSV 0.865557686443598 0.631794531089751 0.0536666666666667 0.183 1.21931127508318 2.71083533327526 0.0536666666666667 0.183 0.755211983290157 0.535693610904431 0.328020372242808 0.660954027210593 Q00613 HSF1 Q00613.S314.p_HSF1 Q00613_S314s _1_1_314_314 Q00613 Q00613|E9PMQ6|Q00613-2 Heat shock factor protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.37277.37277.3 24.93 20.61 2.697 7 1 1 0 968.4969 2823.5098 S314s Hydrogen 310 (R) VEEAsPGRPSSVDTLLSPTALIDSILR (E) VEEAS(0.99)PGRPS(0.0)S(0.0)VDT(0.0)LLS(0.0)PT(0.0)ALIDS(0.0)ILR s:Phosphorylated S HSF1 57544.7 6 4 1960.1 105.12 HUMAN 1 1.2193 2.7108 SPRVKKNSVHEQEAI-p Q8IX90;S110-p SPRVKKNSVHEQEAI 0.68768152851236 0.00226437279650065 0.089 -0.881666666666667 3.05456879594414 40.9337448821953 0.089 -0.881666666666667 0.49492924921562 8.06539258775837e-05 0.731474208089168 -10.5594271623163 Q8IX90 SKA3 Q8IX90.S110.p_SKA3 Q8IX90_S110s _1_1_110_110 Q8IX90 Q8IX90|Q8IX90-3 Spindle and kinetochore-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13280.13280.5 17.21 17.21 5.476 3 1 1 0 809.0135 3961.0895 S110s TMT10 106 (R) VKKNsVHEQEAINSDPELSNCENFQK (T) VKKNS(0.99)VHEQEAINS(0.0)DPELS(0.0)NCENFQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SKA3 46872 1 1 966.1 193.88 HUMAN 1 3.0546 -40.9337 SPRVPGGSPRTPNRS-p Q9Y6G9;S405-p SPRVPGGSPRTPNRS 0.135175709599961 0.900932675319687 0.264 -0.018 17.8228315167374 0.633951100302458 0.264 -0.018 0.0165088510184706 0.864181350903446 3.42649819268998 -0.179341145185224 Q9Y6G9 DYNC1LI1 Q9Y6G9.S405.p_DYNC1LI1 Q9Y6G9_S405s _1_1_405_405 Q9Y6G9 Q9Y6G9|E9PHI6 Cytoplasmic dynein 1 light intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7763.7763.4 14.39 11.91 4.216 3 1 1 0 620.576 2399.3105 S405s TMT10 386 (K) QPPTAAGRPVDASPRVPGGsPR (T) QPPT(0.0)AAGRPVDAS(0.0)PRVPGGS(0.99)PR s:Phosphorylated S DYNC1LI1 56863.4 6 8 510.1 287.75 HUMAN 1 17.8228 -0.634 SPRWKHRSLSPVPRN-p A2AJT9;S15-p SPRWKHRSLSPVPRN 0.171360536114766 0.0278437729818107 0.605666666666667 -0.43 15.2656720754476 21.0786350593498 0.605666666666667 -0.43 0.0297462889619487 0.00780075241223311 2.92842830575081 -4.11024298023158 A2AJT9 CXorf23 A2AJT9.S15.p_CXorf23 A2AJT9_S15sS17s_2_2_15_17 A2AJT9 A2AJT9|A2AJT9-2|A2AJT9-3 BCLAF1 and THRAP3 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4197.4197.3 8.67 8.67 99 2 2 2 0 403.5163 1048.601 S15s S17s Hydrogen 13 (K) HRsLsPVPR (N) HRS(1.0)LS(1.0)PVPR s:Phosphorylated S BCLAF3 84269.3 4 11 1202.1 166.95 HUMAN 1 15.2657 -21.0786 SPRYENHSATAESSR-p Q15262-3;S836-p SPRYENHSATAESSR 0.734062906982246 0.587708100907076 -0.0616666666666667 0.095 2.54198504111793 3.11979566465336 -0.0616666666666667 0.095 0.556931132781595 0.487551428835226 -0.62574364543992 0.744533949132915 Q15262 PTPRK Q15262.3.S836.p_PTPRK Q15262-3_S836s _1_1_836_836 Q15262-3 Q15262-3|Q15262-2 Isoform 3 of Receptor-type tyrosine-protein phosphatase kappa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4097.4097.3 11.12 11.12 2.92 5 1 1 0 554.2439 1580.7502 S836s TMT10 832 (R) YENHsATAESSR (L) Y(0.0)ENHS(0.99)AT(0.0)AES(0.0)S(0.0)R s:Phosphorylated S PTPRK 165014.2 1 2 3730.1 44.34 HUMAN 1 -2.542 3.1198 SPSAEKASPQENGPA-p Q5JSZ5;S563-p SPSAEKASPQENGPA 0.116602871314905 0.0435420642721022 -0.326666666666667 -0.245666666666667 19.4216741598359 18.2339399395877 -0.326666666666667 -0.245666666666667 0.0114243785204312 0.0150177892713069 -3.75591996512592 -3.50684776010701 Q5JSZ5 PRRC2B Q5JSZ5.S563.p_PRRC2B Q5JSZ5_S563s _1_1_563_563 Q5JSZ5 Q5JSZ5|Q5JSZ5-5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15892.15892.4 20.98 18.01 2.448 3 1 1 0 778.9084 3032.6408 S563s TMT10 552 (K) EVPWSPSAEKAsPQENGPAVHK (G) EVPWS(0.0)PS(0.0)AEKAS(0.99)PQENGPAVHK K:TMT10,s:Phosphorylated S PRRC2B 244103.4 4 60 36.2 882.05 HUMAN 1 -19.4217 -18.2339 SPSANLKSPQTPSQM-p Q86UU0;S954-p SPSANLKSPQTPSQM 0.455145758341492 0.0212672691812805 -0.193333333333333 0.44 6.30415910758152 22.8701636002421 -0.193333333333333 0.44 0.234198489255742 0.00516396916054208 -1.33857133129779 4.51877703132725 Q86UU0 BCL9L Q86UU0.S954.p_BCL9L Q86UU0_S954s _1_1_954_954 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25716.25716.4 18.56 19.27 2.301 4 1 1 0 671.1089 2601.4475 S954s TMT10 954 (K) sPQTPSQMVPLPSANPPGPLK (S) S(0.99)PQT(0.0)PS(0.0)QMVPLPS(0.0)ANPPGPLK K:TMT10,s:Phosphorylated S BCL9L 157526.3 1 15 139.1 524.37 HUMAN 1 -6.3042 22.8702 SPSDLHISPLAKKLP-p M0QXA7;S451-p SPSDLHISPLAKKLP 0.274988159129376 0.000952253650599092 -0.156666666666667 -1.402 10.6123414572737 55.3518361885273 -0.156666666666667 -1.402 0.0868492063828213 2.91619379231819e-06 -2.08832549506023 -19.7647589384553 M0QXA7 WIZ M0QXA7.S451.p_WIZ M0QXA7_S451s _1_1_451_451 M0QXA7 O95785|M0QXA7|O95785-3|O95785-4|B9EGQ5|O95785-2 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19180.19180.3 14.86 14.86 5.93 3 1 1 0 601.6642 1723.0154 S451s TMT10 444 (R) SPSDLHIsPLAK (K) S(0.0)PS(0.0)DLHIS(0.99)PLAK K:TMT10,s:Phosphorylated S WIZ 104190.1 4 11 195.1 461.51 HUMAN 1 -10.6123 -55.3518 SPSGPVKSPPLSPVG-p Q9BVC5;S189-p SPSGPVKSPPLSPVG 0.434272682849394 0.019098886346121 -0.138666666666667 0.362333333333333 6.67385453367807 23.6404892718536 -0.138666666666667 0.362333333333333 0.215087190424155 0.00432465107200652 -1.40379349725758 4.70203478301843 Q9BVC5 C2orf49 Q9BVC5.S189.p_C2orf49 Q9BVC5_S189s _1_1_189_189 Q9BVC5 Q9BVC5|Q9BVC5-2|C9J4K0 Ashwin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19050.19050.3 15.08 13.11 3.07 4 1 1 0 606.6771 1738.0515 S189s TMT10 189 (K) sPPLSPVGTTPVK (L) S(0.99)PPLS(0.0)PVGT(0.0)T(0.0)PVK K:TMT10,s:Phosphorylated S C2orf49 25915 8 4 1142.1 173.17 HUMAN 1 -6.6739 23.6405 SPSGQKRSRSRSPHE-p Q9NTZ6;S420-p SPSGQKRSRSRSPHE 0.645253408332387 0.17868052360167 0.0636666666666666 0.199 3.56030429994434 9.83897520190485 0.0636666666666667 0.199 0.440523995943304 0.103777326871068 0.832089389286213 1.95297258339441 Q9NTZ6 RBM12 Q9NTZ6.S420.p_RBM12 Q9NTZ6_S420sS422sS424s_3_3_420_424 Q9NTZ6 Q9NTZ6 RNA-binding protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17769.17769.4 10.73 7.25 5.572 4 3 3 0 648.7963 2352.2647 S420s S422s S424s TMT10 420 (R) sRsRsPHEAGFCVYLK (G) S(0.99)RS(0.99)RS(0.99)PHEAGFCVY(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RBM12 97622 19 4 2839.1 68.44 HUMAN 1 3.5603 9.839 SPSIPVGSPNFSSVK-p Q8NEZ4-3;S3526-p SPSIPVGSPNFSSVK 0.325038366971884 0.895293727551886 -0.136666666666667 -0.014 9.14262778309419 0.674012328454923 -0.136666666666667 -0.014 0.121825224869419 0.856246416949099 -1.8330553458735 -0.189964522928186 Q8NEZ4 KMT2C Q8NEZ4.3.S3526.p_KMT2C Q8NEZ4-3_S3526s _1_1_3526_3526 Q8NEZ4-3 Q8NEZ4-3|Q8NEZ4-2 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29940.29940.4 19.62 19.62 2.669 6 1 1 0 766.9016 2984.6133 S3526s TMT10 3509 (R) QVGPPSFVPDSPSIPVGsPNFSSVK (Q) QVGPPS(0.0)FVPDS(0.0)PS(0.0)IPVGS(0.99)PNFS(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S KMT2C 554869.1 7 18 88.1 626.31 HUMAN 1 -9.1426 -0.674 SPSKENESSDSEEEV-p Q6KC79;S2490-p SPSKENESSDSEEEV 0.255498822846135 0.0296855856884825 -0.259333333333333 0.610666666666667 11.2681650886569 20.6733152151592 -0.259333333333333 0.610666666666667 0.0746764202592899 0.00856383869460072 -2.20315789703801 4.02103893766363 Q6KC79 NIPBL Q6KC79.S2490.p_NIPBL Q6KC79_S2490sS2491sS2493s_3_3_2490_2493 Q6KC79 Q6KC79|Q6KC79-2 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5016.5430.3 9.35 9.35 9.353 4 3 3 0 740.2761 1978.9151 S2490s S2491s S2493s TMT10 2487 (K) ENEssDsEEEVSRPR (K) ENES(0.99)S(0.99)DS(0.99)EEEVS(0.0)RPR s:Phosphorylated S NIPBL 318099.5 1 39 50.1 752.87 HUMAN 1 -11.2682 20.6733 SPSKKRCSDNTEVEV-p Q9NQW6;S72-p SPSKKRCSDNTEVEV 0.110880621512576 0.00752314179680432 -0.299333333333333 -0.594 19.9807353683782 30.3536207326843 -0.299333333333333 -0.594 0.0100444569828475 0.000921802595728376 -3.87481719002422 -6.5299278094727 Q9NQW6 ANLN Q9NQW6.S72.p_ANLN Q9NQW6_S72s _1_1_72_72 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13798.13798.5 27.88 27.88 1.183 6 1 1 0 790.0143 3866.0735 S72s TMT10 69 (K) KRCsDNTEVEVSNLENKQPVESTSAK (S) KRCS(0.99)DNT(0.0)EVEVS(0.0)NLENKQPVES(0.0)T(0.0)S(0.0)AK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ANLN 125566 9 11 68.1 675.08 HUMAN 1 -19.9807 -30.3536 SPSKLLDTPIKNLLD-p Q6N021;T1114-p SPSKLLDTPIKNLLD 0.0871905809717546 0.00112568182952083 -0.794 -1.916 22.5669235630132 49.1419666711368 -0.794 -1.916 0.00553742227906303 1.21843771327345e-05 -4.4527883360152 -15.1198358945246 Q6N021 TET2 Q6N021.T1114.p_TET2 Q6N021_T1114t _1_1_1114_1114 Q6N021 E7EQS8|Q6N021|Q6N021-3|E7EPB1|Q6N021-2 Methylcytosine dioxygenase TET2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20440.20440.2 9.79 1.37 99 1 1 1 0 669.3968 1257.8182 T1114t TMT10 1111 (K) LLDtPIK (N) LLDT(1.0)PIK K:TMT10,t:Phosphorylated T TET2 226374.6 1 13 594.1 264.06 HUMAN 1 -22.5669 -49.142 SPSKRRDSGDNSAPS-p Q8IXQ3;S76-p SPSKRRDSGDNSAPS 0.524205286941981 0.360576954002374 -0.0876666666666667 0.098 5.18899052437943 5.87830704698108 -0.0876666666666667 0.098 0.302761708669886 0.258326699536013 -1.13858151678331 1.26255985108061 Q8IXQ3 C9orf40 Q8IXQ3.S76.p_C9orf40 Q8IXQ3_S76s _1_1_76_76 Q8IXQ3 Q8IXQ3 Uncharacterized protein C9orf40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3182.3182.3 9.4 7.11 1.182 3 1 1 0 647.6307 1860.911 S76s TMT10 73 (K) RRDsGDNSAPSGQER (E) RRDS(0.99)GDNS(0.0)APS(0.0)GQER s:Phosphorylated S C9orf40 21120 3 2 2249.1 91.42 HUMAN 1 -5.189 5.8783 SPSMAVPSPGWVASP-p Q86UU0;S1004-p SPSMAVPSPGWVASP 0.82086427017453 0.0233346665139398 -0.044 0.304666666666667 1.65314884095317 22.2711957389825 -0.044 0.304666666666667 0.683415958624001 0.00592762097470093 -0.430541524610218 4.37951690837188 Q86UU0 BCL9L Q86UU0.S1004.p_BCL9L Q86UU0_S1004s _1_1_1004_1004 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24445.24445.3 11.11 11.11 5.009 4 1 1 0 712.705 2056.1302 S1004s TMT10 997 (K) SPSMAVPsPGWVASPK (T) S(0.0)PS(0.0)MAVPS(0.99)PGWVAS(0.0)PK K:TMT10,s:Phosphorylated S BCL9L 157526.3 3 21 139.1 524.37 HUMAN 1 -1.6531 22.2712 SPSNLCGSPPGSIRK-p Q9C0B0;S385-p SPSNLCGSPPGSIRK 0.924823144129739 0.235109641697372 -0.0163333333333333 -0.159 0.668745208387011 8.28021862242246 -0.0163333333333333 -0.159 0.857285501904885 0.148586084265525 -0.188589829222322 -1.68318605179912 Q9C0B0 UNK Q9C0B0.S385.p_UNK Q9C0B0_S385s _1_1_385_385 Q9C0B0 Q9C0B0 RING finger protein unkempt homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14442.14442.2 16.68 16.68 3.161 6 1 1 0 1098.5219 2116.0654 S385s TMT10 373 (R) NSSLGSPSNLCGsPPGSIR (K) NS(0.0)S(0.0)LGS(0.0)PS(0.0)NLCGS(0.99)PPGS(0.0)IR C:Carbamidomethylation,s:Phosphorylated S UNK 89851.6 10 6 1185.1 168.8 HUMAN 1 -0.6687 -8.2802 SPSPGPRSPKAPPSS-p P98171-2;S946-p SPSPGPRSPKAPPSS 0.43508014991783 0.330199676253647 0.111 0.109 6.65325451950197 6.37141216900429 0.111 0.109 0.216109843107903 0.230599723967391 1.40017002171386 1.35012837734766 P98171 ARHGAP4 P98171.2.S946.p_ARHGAP4 P98171-2_S946s _1_1_946_946 P98171-2 P98171-2|E7EQN5|E9PCM6 Isoform 2 of Rho GTPase-activating protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9902.9902.3 15.81 15.81 2.058 6 1 1 0 787.4164 2280.2712 S946s TMT10 930 (R) QGLGPASTTSPSPGPRsPK (A) QGLGPAS(0.0)T(0.0)T(0.0)S(0.0)PS(0.0)PGPRS(0.99)PK K:TMT10,s:Phosphorylated S ARHGAP4 110417.7 7 3 1843.1 111.4 HUMAN 1 6.6533 6.3714 SPSPPDGSPAATPEI-p O00499;S303-p SPSPPDGSPAATPEI 0.636743873817189 0.599115874145865 0.0693333333333333 -0.083 3.65675785179146 3.0147887960157 0.0693333333333333 -0.083 0.430848132473506 0.49948347025528 0.85092227784837 -0.723312664785044 O00499 BIN1 O00499.S303.p_BIN1 O00499_S298sS303s_2_2_298_303 O00499 O00499|O00499-5|O00499-2|O00499-3|O00499-11|O00499-6|O00499-4|O00499-8|O00499-7|O00499-10|O00499-9 Myc box-dependent-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11626.11626.3 12.36 12.36 2.615 4 2 2 0 832.738 2336.261 S298s S303s TMT10 293 (K) GNKSPsPPDGsPAATPEIR (V) GNKS(0.0)PS(0.99)PPDGS(0.99)PAAT(0.0)PEIR K:TMT10,s:Phosphorylated S BIN1 64926.4 2 3 2956.1 64.78 HUMAN 1 3.6568 -3.0148 SPSPRRYSPPIQRRY-p A9Z1X7;S606-p SPSPRRYSPPIQRRY 0.42638220869291 0.671797215700757 0.118333333333333 0.041 6.82026174439195 2.36228311156244 0.118333333333333 0.041 0.207957134990413 0.580459186498777 1.42951283235367 0.587544221237635 A9Z1X7 NotFound A9Z1X7.S606.p_NotFound A9Z1X7_S606s _1_1_606_606 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7030.7030.3 11.17 7.84 7.84 2 1 1 0 442.5692 1245.7265 S606s TMT10 604 (R) RYsPPIQR (R) RY(0.0)S(0.99)PPIQR s:Phosphorylated S SRRM1 103445.7 26 26 8.1 1346.57 HUMAN 1 6.8203 2.3623 SPSPTSPSPTLGRRR-p Q9H330-2;S332-p SPSPTSPSPTLGRRR 0.386350387359242 0.267853473406171 0.154333333333333 0.157333333333333 7.64424785629069 7.53439812570631 0.154333333333333 0.157333333333333 0.172018523000328 0.176425024911543 1.57337918405738 1.55380726911047 Q9H330 TMEM245 Q9H330.2.S332.p_TMEM245 Q9H330-2_S332s _1_1_332_332 Q9H330-2 Q9H330-2|Q9H330-4|F8WBJ7 Isoform 2 of Transmembrane protein 245 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15475.15475.3 20.26 20.26 1.12 13 1 1 0 964.4684 2811.421 S332s TMT10 311 (R) GESAPTLSTSPSPSSPSPTSPsPTLGR (R) GES(0.0)APT(0.0)LS(0.0)T(0.0)S(0.0)PS(0.0)PS(0.0)S(0.0)PS(0.0)PT(0.0)S(0.0)PS(0.99)PT(0.0)LGR s:Phosphorylated S TMEM245 97868.8 1 4 2319.1 87.95 HUMAN 1 7.6442 7.5344 SPSRLSKSQGGEEEG-p E9PSH4;S75-p SPSRLSKSQGGEEEG 0.0678393708492278 0.0929823239092314 -0.874666666666667 -0.374333333333333 25.2155089906729 13.6459328292096 -0.874666666666667 -0.374333333333333 0.00300918647325553 0.0431923384025486 -5.09856647315066 -2.62661041049985 E9PSH4 NotFound E9PSH4.S75.p_NotFound E9PSH4_S75s _1_1_75_75 E9PSH4 E9PSH4|Q9H063 Repressor of RNA polymerase III transcription MAF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14622.14622.3 13.48 13.48 1.112 3 1 1 0 810.0908 2348.2912 S75s TMT10 72 (R) LSKsQGGEEEGPLSDK (C) LS(0.0)KS(0.99)QGGEEEGPLS(0.0)DK K:TMT10,s:Phosphorylated S MAF1 32485.4 5 3 1842.1 111.45 HUMAN 1 -25.2155 -13.6459 SPSSRPASPTRSQAQ-p P25054;S2473-p SPSSRPASPTRSQAQ 0.546816603524605 0.804326179177927 -0.0963333333333333 -0.027 4.83952845473834 1.32394863499774 -0.100749269311355 -0.027 0.328130918751179 0.737233627483601 -1.07456713139758 -0.35323696407798 P25054 APC P25054.S2473.p_APC P25054_S2473s _1_1_2473_2473 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14935.14935.5 19.3 19.3 1.153 8 1 1 0 581.0997 2821.5096 S2473s TMT10 2455 (R) KLEESASFESLSPSSRPAsPTR (S) KLEES(0.0)AS(0.0)FES(0.0)LS(0.0)PS(0.0)S(0.0)RPAS(0.99)PT(0.0)R K:TMT10,s:Phosphorylated S APC 313808.5 4 42 33.1 890.71 HUMAN 1 -4.8395 -1.3239 SPSSSVGSPPVLYMQ-p Q9NYV6;S640-p SPSSSVGSPPVLYMQ 0.314772239868731 0.0272025018745636 -0.151666666666667 -0.331666666666667 9.39298974979455 21.2366441370842 -0.151666666666667 -0.331666666666667 0.115000843294252 0.00752203909499745 -1.87641573104331 -4.14532925010364 Q9NYV6 RRN3 Q9NYV6.S640.p_RRN3 Q9NYV6_S640s _1_1_640_640 Q9NYV6 Q9NYV6|F5H148|Q9NYV6-3|Q9NYV6-4 RNA polymerase I-specific transcription initiation factor RRN3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30595.30595.2 14.71 14.71 2.153 7 1 1 0 1120.0484 2159.1256 S640s TMT10 633 (R) SPSSSVGsPPVLYMQPSPL (-) S(0.0)PS(0.0)S(0.0)S(0.0)VGS(0.99)PPVLY(0.0)MQPS(0.0)PL s:Phosphorylated S RRN3 74904.7 1 2 2705.1 73.33 HUMAN 1 -9.393 -21.2366 SPSVLIHSLGKSTTD-p Q9P0K7;S419-p SPSVLIHSLGKSTTD 0.0617660610365025 0.00275348543750874 -0.578333333333333 -0.773666666666667 26.3448452886448 38.7751955451474 -0.578333333333333 -0.773666666666667 0.00232014683609429 0.0001325807420699 -5.39264866158639 -9.59387866180103 Q9P0K7 RAI14 Q9P0K7.S419.p_RAI14 Q9P0K7_S419s _1_1_419_419 Q9P0K7 Q9P0K7-2|Q9P0K7-3 Ankycorbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18028.18028.3 18.03 18.03 6.527 4 1 1 0 588.334 1683.0205 S419s TMT10 411 (K) SSPSVLIHsLGK (S) S(0.0)S(0.0)PS(0.0)VLIHS(0.99)LGK K:TMT10,s:Phosphorylated S RAI14 110666.9 1 15 498.1 292.24 HUMAN 1 -26.3448 -38.7752 SPSVSPGSPPSSPRS-p Q3MIN7-2;S561-p SPSVSPGSPPSSPRS 0.190209416769307 0.0283169712966503 0.220333333333333 0.372666666666667 14.1008885094277 20.9713904483062 0.220333333333333 0.372666666666667 0.0388965559612438 0.00799578219017738 2.71146065230671 4.08652915790652 Q3MIN7 RGL3 Q3MIN7.2.S561.p_RGL3 Q3MIN7-2_S561s _1_1_561_561 Q3MIN7-2 Q3MIN7-2 Isoform 2 of Ral guanine nucleotide dissociation stimulator-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18204.18204.3 14.53 13.61 1.191 16 1 1 0 1179.2086 3455.6434 S561s TMT10 534 (K) SSSPSGSPGDPSSPTSSLCISPSVSPGsPPSSPR (S) S(0.0)S(0.0)S(0.0)PS(0.0)GS(0.0)PGDPS(0.0)S(0.0)PT(0.0)S(0.0)S(0.0)LCIS(0.0)PS(0.0)VS(0.0)PGS(0.99)PPS(0.0)S(0.0)PR C:Carbamidomethylation,s:Phosphorylated S RGL3 79192.2 1 9 1395.2 146.85 HUMAN 1 14.1009 20.9714 SPTCQKLSPKWCFLD-p Q13574-5;S713-p SPTCQKLSPKWCFLD 0.590876065472109 0.0393388243202421 -0.0906666666666667 0.277 4.20976004652466 18.8576576024015 -0.0906666666666667 0.277 0.379335943209893 0.013008710227169 -0.957019017720501 3.63481069705797 Q13574 DGKZ Q13574.5.S713.p_DGKZ Q13574-5_S713s _1_1_713_713 Q13574-5 Q13574|Q13574-3|Q13574-5|Q13574-7|Q13574-4|Q13574-2|Q13574-6|E9PNL8 Isoform 5 of Diacylglycerol kinase zeta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9811.9811.3 8.07 1.62 1.394 3 1 1 0 638.3556 1833.0871 S713s TMT10 706 (K) SPTCQKLsPK (W) S(0.0)PT(0.0)CQKLS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DGKZ 106119.2 1 3 1861.1 110.66 HUMAN 1 -4.2098 18.8577 SPTDAEGSPGLSRVR-p Q8TER5;S262-p SPTDAEGSPGLSRVR 0.298051628551329 0.0207694246767137 0.204333333333333 0.341333333333333 9.88730413723325 23.015706248479 0.204333333333333 0.341333333333333 0.102628879255253 0.00499377964899017 1.96213782524917 4.55303748119342 Q8TER5 ARHGEF40 Q8TER5.S262.p_ARHGEF40 Q8TER5_S262s _1_1_262_262 Q8TER5 Q8TER5|Q8TER5-3|Q8TER5-4|G3V5C1|G3V485 Rho guanine nucleotide exchange factor 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7603.7603.2 15.73 15.73 2.367 4 1 1 0 820.3804 1559.7863 S262s TMT10 254 (R) GSPTDAEGsPGLSR (V) GS(0.0)PT(0.0)DAEGS(0.99)PGLS(0.0)R s:Phosphorylated S ARHGEF40 166366.2 3 1 2483.1 81.7 HUMAN 1 9.8873 23.0157 SPTEGEAS_______-p Q9Y6G9;S523-p SPTEGEAS_______ 0.278015984722801 0.0670575292395089 0.156333333333333 -0.21 10.5215133370589 15.6094010985229 0.156333333333333 -0.21 0.0886846928630573 0.0274827311977479 2.07247902420071 -2.99149528940326 Q9Y6G9 DYNC1LI1 Q9Y6G9.S523.p_DYNC1LI1 Q9Y6G9_S523s _1_1_523_523 Q9Y6G9 Q9Y6G9|E9PHI6 Cytoplasmic dynein 1 light intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11040.11040.3 9.28 9.28 1.719 8 1 1 0 732.3627 2115.1019 S523s Hydrogen 505 (R) KPVTVSPTTPTSPTEGEAs (-) KPVT(0.0)VS(0.0)PT(0.0)T(0.0)PT(0.0)S(0.0)PT(0.0)EGEAS(0.99) K:TMT10-Lys-Only,s:Phosphorylated S DYNC1LI1 56863.4 1 18 510.1 287.75 HUMAN 1 10.5215 -15.6094 SPTEGKGSGLQGHII-p P04629;S484-p SPTEGKGSGLQGHII 0.158312848211182 0.973596765748086 0.823333333333333 0.00833333333333336 16.044444590153 0.163828986861568 0.823333333333333 0.00833333333333335 0.0248631151291439 0.96297963169574 3.07672876446622 0.0485979685568587 P04629 NTRK1 P04629.S484.p_NTRK1 P04629_S484sS498s_2_2_484_498 P04629 P04629 High affinity nerve growth factor receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13027.13027.4 7.69 1.64 1.55 3 2 2 0 910.436 3477.8326 S484s N493n S498s TMT10 483 (K) GsGLQGHIIEnPQYFsDACVHHIKRR (D) GS(0.99)GLQGHIIEN(1.0)PQY(0.0)FS(0.99)DACVHHIKRR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated NTRK1 88693.7 1 1 7107.1 7.69 HUMAN 1 16.0444 0.1638 SPTFRSDSPVPTAPT-p Q86U44;S50-p SPTFRSDSPVPTAPT 0.10298015645821 0.0176399612614541 0.381333333333333 0.539333333333333 20.8428298467429 24.1573638149157 0.381333333333333 0.539333333333333 0.00823601284590046 0.00383940228046963 4.06221108630986 4.82771758587557 Q86U44 METTL3 Q86U44.S50.p_METTL3 Q86U44_S50s _1_1_50_50 Q86U44 Q86U44|B4DTN4|F5H6D8|B4E349 N6-adenosine-methyltransferase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22099.22099.4 21.59 20.3 1.14 9 1 1 0 1001.0216 3921.0948 S50s TMT10 48 (R) SDsPVPTAPTSGGPKPSTASAVPELATDPELEK (K) S(0.0)DS(0.99)PVPT(0.0)APT(0.0)S(0.0)GGPKPS(0.0)T(0.0)AS(0.0)AVPELAT(0.0)DPELEK K:TMT10,s:Phosphorylated S METTL3 65214.5 10 1 1904.1 108.18 HUMAN 1 20.8428 24.1574 SPTLRRRSQEKIGKA-p Q13523;S248-p SPTLRRRSQEKIGKA 0.203469268152067 0.0198801395076237 0.596333333333333 0.602333333333333 13.4004141950424 23.3405069704086 0.596333333333333 0.602333333333333 0.04570445983094 0.00463392822764994 2.5834759884491 4.63010224601126 Q13523 PRPF4B Q13523.S248.p_PRPF4B Q13523_S248s _1_1_248_248 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4143.4143.4 8.03 8.03 99 1 1 1 0 410.7408 1559.9746 S248s Hydrogen 246 (R) RRsQEKIGK (A) RRS(1.0)QEKIGK K:TMT10-Lys-Only,s:Phosphorylated S PRPF4B 117327.1 1 9 70.1 666.55 HUMAN 1 13.4004 23.3405 SPTPAPFSPFNPTSL-p A0A087WU18;S647-p SPTPAPFSPFNPTSL 0.100664127254112 0.215267823569918 0.550666666666667 -0.142666666666667 21.0980545290828 8.77700320189717 0.550666666666667 -0.142666666666667 0.00776594923140491 0.132525569689533 4.11866845826139 -1.7691426399185 A0A087WU18 NotFound A0A087WU18.S647.p_NotFound A0A087WU18_S647s _1_1_647_647 A0A087WU18 Q99607|A0A087WU18 ETS-related transcription factor Elf-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.33574.33574.3 11.4 11.4 3.827 5 1 1 0 780.4211 2259.2789 S647s TMT10 640 (R) SPTPAPFsPFNPTSLIK (M) S(0.0)PT(0.0)PAPFS(0.99)PFNPT(0.0)S(0.0)LIK K:TMT10,s:Phosphorylated S ELF4 71367.2 1 5 3083.1 61.18 HUMAN 1 21.0981 -8.777 SPTPPHHTPPPVSSM-p Q15648;T628-p SPTPPHHTPPPVSSM 0.296838039965525 0.0570489901482815 0.150333333333333 0.223 9.93623404206295 16.5731431329418 0.150333333333333 0.223 0.101479097407978 0.0220133270903852 1.97063422157931 3.17668309303298 Q15648 MED1 Q15648.T628.p_MED1 Q15648_T628t _1_1_628_628 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32198.32198.4 24.79 22.73 1.154 13 1 1 0 1204.8783 4736.5082 T628t TMT10 598 (K) VSQNPILTSLLQITGNGGSTIGSSPTPPHHtPPPVSSMAGNTK (N) VS(0.0)QNPILT(0.0)S(0.0)LLQIT(0.0)GNGGS(0.0)T(0.0)IGS(0.0)S(0.0)PT(0.0)PPHHT(0.99)PPPVS(0.0)S(0.0)MAGNT(0.0)K K:TMT10,t:Phosphorylated T MED1 169445 6 2 115.1 566.87 HUMAN 1 9.9362 16.5731 SPTPRSHSPSASQSG-p Q8WWI1-3;S1259-p SPTPRSHSPSASQSG 0.278650239773871 0.0375211915391556 0.249666666666667 0.272666666666667 10.4978088470983 19.1547947885694 0.249666666666667 0.272666666666667 0.0891700715850265 0.0121484402253373 2.06834541296262 3.69658816056695 Q8WWI1 LMO7 Q8WWI1.3.S1259.p_LMO7 Q8WWI1-3_S1259s _1_1_1259_1259 Q8WWI1-3 Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3916.3916.2 13.65 6.29 1.661 6 1 1 0 869.4097 1657.8455 S1259s TMT10 1257 (R) SHsPSASQSGSQLR (N) S(0.0)HS(0.99)PS(0.0)AS(0.0)QS(0.0)GS(0.0)QLR s:Phosphorylated S LMO7 154694.3 5 31 61.1 704.74 HUMAN 1 10.4978 19.1548 SPTPSSRSPAPPKPR-p Q9NZ20;S296-p SPTPSSRSPAPPKPR 0.145215523589904 0.0529355983987602 0.771333333333333 -0.574333333333333 17.0689350926851 17.0221181822242 0.771333333333333 -0.574333333333333 0.0196384175960049 0.0198512647650118 3.27622451341421 -3.26450087637411 Q9NZ20 PLA2G3 Q9NZ20.S296.p_PLA2G3 Q9NZ20_S296s _1_1_296_296 Q9NZ20 Q9NZ20 Group 3 secretory phospholipase A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5104.5104.3 7.23 7.23 99 1 1 1 0 386.88 1078.657 S296s Hydrogen 296 (R) sPAPPKPR (Q) S(1.0)PAPPKPR K:TMT10-Lys-Only,s:Phosphorylated S PLA2G3 58421.1 1 1 7224.1 7.23 HUMAN 1 17.0689 -17.0221 SPTRYSLSPSKSYKY-p P49792;S788-p SPTRYSLSPSKSYKY 0.85107973826145 0.0647364253489138 0.0356666666666667 -0.237333333333333 1.35479187349396 15.8214417785978 0.0356666666666667 -0.237333333333333 0.732016402707397 0.0261731396339713 0.360650077853642 -3.03186707687138 P49792 RANBP2 P49792.S788.p_RANBP2 P49792_S788s _1_1_788_788 P49792 P49792|Q99666|O14715|J3KNE0|A6NKT7|Q7Z3J3|A0A286YES2|F8VYC4|P0DJD1|A0A1W2PNU4|P0DJD0|J3KQ37|Q99666-2|F8W705 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.13023.13023.2 9.4 9.4 1.439 4 1 1 0 660.3545 1239.7349 S788s TMT10 785 (R) YSLsPSK (S) Y(0.0)S(0.0)LS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S RANBP2 362585.9 5 11 9.1 1298.62 HUMAN 1 1.3548 -15.8214 SPTSPTYSPTSPKYS-p P24928;S1917-p SPTSPTYSPTSPKYS 0.435091796535646 0.965191287637584 -0.127333333333333 0.00800000000000003 6.65277445829846 0.220157955448417 -0.127333333333333 0.00800000000000004 0.216133732816351 0.950570220231529 -1.40008556629788 0.0649119527719895 P24928 POLR2A P24928.S1917.p_POLR2A P24928_S1917s _1_1_1917_1917 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.14109.14109.2 15.31 15.31 1.566 9 1 1 0 1026.0098 1971.0475 S1917s TMT10 1909 (K) YSPTSPTYsPTSPK (Y) Y(0.0)S(0.0)PT(0.0)S(0.0)PT(0.0)Y(0.0)S(0.99)PT(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S POLR2A 218541.6 3 12 920.1 200.24 HUMAN 1 -6.6528 0.2202 SPTSSTLSNLELDAA-p Q9ULH7-5;S561-p SPTSSTLSNLELDAA 0.86783436077791 0.892665266767967 -0.051 0.0253333333333333 1.19989038423629 0.692095479289198 -0.051 0.0253333333333334 0.758596721740245 0.852688590848128 -0.32329364058161 0.194735899666218 Q9ULH7 MKL2 Q9ULH7.5.S561.p_MKL2 Q9ULH7-5_S561s_1_1_561_561 Q9ULH7-5 Q9ULH7-5|Q9ULH7-4 Isoform 5 of MKL/myocardin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26431.26431.3 10.03 10.03 1.19 8 1 1 0 1074.8416 3125.556 M546m S561s N562n TMT10 546 (R) mTNNEDSLSPTSSTLsnLELDAAEK (D) M(1.0)T(0.0)N(0.0)N(0.0)EDS(0.0)LS(0.0)PT(0.0)S(0.0)S(0.0)T(0.0)LS(0.99)N(0.99)LELDAAEK K:TMT10,m:Oxidized methionine,s:Phosphorylated S,n:Deamidated MKL2 119334.1 2 11 464.1 303.55 HUMAN 1 -1.1999 0.6921 SPVAEEHSLIKLYVN-p Q9Y4J8-11;S60-p SPVAEEHSLIKLYVN 0.806595725807555 0.72491127283863 0.0356666666666667 -0.0376666666666666 1.79772268887271 1.92377189538015 0.0356666666666667 -0.0376666666666666 0.661039986855656 0.642129778283335 0.463525228187985 -0.49179750433603 Q9Y4J8 DTNA Q9Y4J8.11.S60.p_DTNA Q9Y4J8-11_S60s _1_1_60_60 Q9Y4J8-11 Q9Y4J8-11|Q9Y4J8-10 Isoform 11 of Dystrobrevin alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17777.17777.4 21.02 21.02 10.321 4 1 1 0 665.3604 2578.4605 S60s TMT10 44 (R) RLPEGISASSPVAEEHsLIK (L) RLPEGIS(0.0)AS(0.0)S(0.0)PVAEEHS(0.99)LIK K:TMT10,s:Phosphorylated S DTNA 50530.7 1 10 792.2 224.62 HUMAN 1 1.7977 -1.9238 SPVFNFFSPANKNGT-p Q05D32;S153-p SPVFNFFSPANKNGT 0.264569421891101 0.262890323037234 -0.205666666666667 -0.129333333333333 10.9564190300938 7.6437044322808 -0.205666666666667 -0.129333333333333 0.0802339358664423 0.172040048681198 -2.1484760497493 -1.57280936375325 Q05D32 CTDSPL2 Q05D32.S153.p_CTDSPL2 Q05D32_S153s _1_1_153_153 Q05D32 Q05D32|Q05D32-2 CTD small phosphatase-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.38017.38017.3 20.84 20.84 1.509 5 1 1 0 913.8246 2659.49 S153s TMT10 138 (R) TTLLGTIFSPVFNFFsPANK (N) T(0.0)T(0.0)LLGT(0.0)IFS(0.0)PVFNFFS(0.99)PANK K:TMT10,s:Phosphorylated S CTDSPL2 53168.9 2 8 899.1 203.79 HUMAN 1 -10.9564 -7.6437 SPVFRTGSEPALSPA-p O75815;S370-p SPVFRTGSEPALSPA 0.232221202833204 0.0108744095475618 0.187333333333333 0.462 12.1942515069449 27.5182016432028 0.187333333333333 0.462 0.060335768579 0.00177084208912603 2.3668374971259 5.70308653995594 O75815 BCAR3 O75815.S370.p_BCAR3 O75815_S370s _1_1_370_370 O75815 O75815|O75815-3|O75815-2 Breast cancer anti-estrogen resistance protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15347.15347.2 15.28 15.28 2.462 3 1 1 0 796.9156 1512.8583 S370s TMT10 368 (R) TGsEPALSPAVVR (R) T(0.0)GS(0.99)EPALS(0.0)PAVVR s:Phosphorylated S BCAR3 93533.8 7 11 401.1 327.42 HUMAN 1 12.1943 27.5182 SPVFTSRSAAFSGRG-p P08729;S14-p SPVFTSRSAAFSGRG 0.266168892463952 0.390448949730678 -0.318333333333333 -0.12 10.8934527874764 5.43042312795263 -0.318333333333333 -0.12 0.0814056824072091 0.28638989300442 -2.13745341674985 -1.18212657752099 P08729 KRT7 P08729.S14.p_KRT7 P08729_S14s _1_1_14_14 P08729 P08729 Keratin, type II cytoskeletal 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6366.6366.2 9.77 9.77 9.772 2 1 1 0 502.7413 924.51 S14s TMT10 14 (R) sAAFSGR (G) S(0.99)AAFS(0.0)GR s:Phosphorylated S KRT7 51441.8 1 40 69.2 672.47 HUMAN 1 -10.8935 -5.4304 SPVGSWRSFFNLGKS-p A7KAX9;S662-p SPVGSWRSFFNLGKS 0.214718677142886 0.0808987370106367 0.19 0.194 12.8781975075073 14.4818515982016 0.19 0.194 0.0515442529066097 0.0356299194216808 2.48914175884057 2.78008729073417 A7KAX9 ARHGAP32 A7KAX9.S662.p_ARHGAP32 A7KAX9_S662s _1_1_662_662 A7KAX9 A7KAX9|A7KAX9-2|G3V174 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29713.29713.3 14.74 14.74 2.32 3 1 1 0 707.3752 2040.1431 S662s TMT10 655 (K) SPVGSWRsFFNLGK (S) S(0.0)PVGS(0.0)WRS(0.99)FFNLGK K:TMT10,s:Phosphorylated S ARHGAP32 232236.5 1 8 159.1 497.4 HUMAN 1 12.8782 14.4819 SPVKDPVSPASQKMV-p Q12888-2;S1106-p SPVKDPVSPASQKMV 0.17938997885243 0.00229157720807913 0.217666666666667 1.09566666666667 14.7345017940572 40.7201332378508 0.217666666666667 1.09566666666667 0.0336162930154932 8.47201422323305e-05 2.82880349539023 10.4600610728791 Q12888 TP53BP1 Q12888.2.S1106.p_TP53BP1 Q12888-2_S1106s _1_1_1106_1106 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15136.15136.5 18.83 17.2 2.409 4 1 1 0 675.5815 3293.9061 S1106s TMT10 1090 (R) QSQQPMKPISPVKDPVsPASQK (M) QS(0.0)QQPMKPIS(0.0)PVKDPVS(0.99)PAS(0.0)QK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 8 49 3.1 2297.07 HUMAN 1 14.7345 40.7201 SPVLAEDSEGEG___-p Q99638;S387-p SPVLAEDSEGEG___ 0.645352058762717 0.336163201708165 0.121 0.105333333333333 3.55852320534141 6.27224932464963 0.121 0.105333333333333 0.440704697254604 0.235925599634046 0.831740624839946 1.33259047677756 Q99638 RAD9A Q99638.S387.p_RAD9A Q99638_S387s _1_1_387_387 Q99638 Q99638 Cell cycle checkpoint control protein RAD9A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36372.36372.3 21.34 21.34 10.028 5 1 1 0 1084.8747 3172.6364 S387s TMT10 363 (R) SLFFGSILAPVRSPQGPSPVLAEDsEGEG (-) S(0.0)LFFGS(0.0)ILAPVRS(0.0)PQGPS(0.0)PVLAEDS(0.99)EGEG s:Phosphorylated S RAD9A 43117.2 5 5 1917.1 107.16 HUMAN 1 3.5585 6.2722 SPVLWGWSLPS____-p A1IGU5;S672-p SPVLWGWSLPS____ 0.871205466938452 0.954926372326561 0.0283333333333333 -0.0126666666666667 1.17169714876293 0.285720906661422 0.0283333333333333 -0.0126666666666667 0.763537347896874 0.936327781363606 0.316409141858766 -0.0836612678080262 A1IGU5 ARHGEF37 A1IGU5.S672.p_ARHGEF37 A1IGU5_S672s _1_1_672_672 A1IGU5 A1IGU5 Rho guanine nucleotide exchange factor 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.37202.37202.2 10.68 10.68 2 3 1 1 0 769.3865 1457.799 S672s TMT10 665 (R) SPVLWGWsLPS (-) S(0.0)PVLWGWS(0.99)LPS(0.0) s:Phosphorylated S ARHGEF37 76676.1 2 4 2088.2 98.03 HUMAN 1 1.1717 -0.2857 SPVNNHHSPGQTPTL-p Q5SW79;S1529-p SPVNNHHSPGQTPTL 0.565856073226583 0.13871109301352 0.078 0.155 4.55510190102643 11.3016096232038 0.078 0.155 0.350340067973466 0.0741035540810919 1.02185819573455 2.20800842789288 Q5SW79 CEP170 Q5SW79.S1529.p_CEP170 Q5SW79_S1529s _1_1_1529_1529 Q5SW79 Q5SW79|Q5SW79-3|Q5SW79-2|E7EMW0|E7EWM2|Q96L14 Centrosomal protein of 170 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6364.6364.3 17.46 11.07 1.801 5 1 1 0 874.0889 2540.2803 S1529s TMT10 1521 (K) SSPVNNHHsPGQTPTLGQPEAR (A) S(0.0)S(0.0)PVNNHHS(0.99)PGQT(0.0)PT(0.0)LGQPEAR s:Phosphorylated S CEP170 175689.3 2 27 128.1 537.52 HUMAN 1 4.5551 11.3016 SPVPPARSPSPPPKV-p P54259;S746-p SPVPPARSPSPPPKV 0.883910399642057 0.203927140379653 0.0326666666666667 -0.185 1.05777842625724 9.08517084906634 0.0326666666666667 -0.185 0.783830497951559 0.12344767505774 0.288309396978398 -1.82244514034485 P54259 ATN1 P54259.S746.p_ATN1 P54259_S739sS746sS748s_3_3_739_748 P54259 P54259 Atrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16132.16132.4 15.35 15.35 2.129 5 3 3 0 854.3933 3174.6359 S739s S746s S748s TMT10 728 (K) QEPAEEYETPEsPVPPARsPsPPPK (V) QEPAEEY(0.0)ET(0.0)PES(0.99)PVPPARS(0.99)PS(0.99)PPPK K:TMT10,s:Phosphorylated S ATN1 125583.1 2 16 869.1 209.92 HUMAN 1 1.0578 -9.0852 SPVPRPASRSSSPGA-p Q13469;S243-p SPVPRPASRSSSPGA 0.36641758160487 0.0464024046981153 0.275333333333333 0.435333333333333 8.09449957012742 17.8414937429161 0.275333333333333 0.435333333333333 0.155077947008286 0.0164380624371873 1.65154989122353 3.42748256376077 Q13469 NFATC2 Q13469.S243.p_NFATC2 Q13469_S243s _1_1_243_243 Q13469 Q13469|Q13469-2|Q13469-4|Q13469-3|Q13469-5 Nuclear factor of activated T-cells, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3541.3541.3 7.51 7.51 7.508 2 1 1 0 471.5837 1332.7698 S243s TMT10 235 (R) HSPVPRPAsR (S) HS(0.0)PVPRPAS(0.99)R s:Phosphorylated S NFATC2 101056.9 1 5 843.1 214.04 HUMAN 1 8.0945 17.8415 SPVPRVPSPIAQATG-p A0A087WX45;S590-p SPVPRVPSPIAQATG 0.931970571874728 0.361714039719346 -0.0166666666666667 0.150666666666667 0.606746313876012 5.85858261777241 -0.0166666666666667 0.150666666666667 0.869611688736639 0.259502614787207 -0.172100934469832 1.25903706933377 A0A087WX45 IQCE A0A087WX45.S590.p_IQCE A0A087WX45_S590s _1_1_590_590 A0A087WX45 A0A087WX45|Q6IPM2|A0A087WX19|Q6IPM2-4|Q6IPM2-3|Q6IPM2-2 IQ domain-containing protein E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.34597.34597.3 27.58 27.58 4.478 4 1 1 0 918.8184 2674.4774 S590s Hydrogen 588 (R) VPsPIAQATGSPVQEEAIVIIQSALR (A) VPS(0.99)PIAQAT(0.0)GS(0.0)PVQEEAIVIIQS(0.0)ALR s:Phosphorylated S IQCE 78569.7 9 6 1617.1 127.24 HUMAN 1 -0.6067 5.8586 SPVQGKKSPRLLCIE-p Q96JP5;S110-p SPVQGKKSPRLLCIE 0.362071478134773 0.620749587807368 -0.163333333333333 -0.1 8.19527150200746 2.81593427298364 -0.163333333333333 -0.0999999999999999 0.151521007639872 0.522885468709334 -1.66901904251334 -0.682679420280734 Q96JP5 ZFP91 Q96JP5.S110.p_ZFP91 Q96JP5_S110s _1_1_110_110 Q96JP5 Q96JP5|Q96JP5-2 E3 ubiquitin-protein ligase ZFP91 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5906.5906.4 9.52 5.29 2.546 3 1 1 0 509.548 1955.2005 S110s TMT10 101 (K) SPSPVQGKKsPR (L) S(0.0)PS(0.0)PVQGKKS(0.99)PR K:TMT10,s:Phosphorylated S ZFP91 64299.7 3 3 1081.1 179.92 HUMAN 1 -8.1953 -2.8159 SPVRYKASPAAEDAS-p X6RAB3;S814-p SPVRYKASPAAEDAS 0.497175098488218 0.449564659933147 0.0986666666666667 -0.134666666666667 5.58868527425251 4.627718100073 0.0986666666666667 -0.134666666666667 0.276141368360268 0.344530909012814 1.21092785693806 -1.03517504559411 X6RAB3 NotFound X6RAB3.S814.p_NotFound X6RAB3_S814s _1_1_814_814 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15151.15151.4 18.67 18.67 3.827 9 1 1 0 884.429 3454.7108 S814s TMT10 811 (R) YKAsPAAEDASPSGYPYSGPPPPAYHYR (N) Y(0.0)KAS(0.99)PAAEDAS(0.0)PS(0.0)GY(0.0)PY(0.0)S(0.0)GPPPPAY(0.0)HY(0.0)R K:TMT10,s:Phosphorylated S USP6NL 96835.5 1 18 364.1 342.41 HUMAN 1 5.5887 -4.6277 SPVSESVSPVVPDYL-p A0JNW5;S891-p SPVSESVSPVVPDYL 0.193883926313618 0.423055863731163 -0.361666666666667 -0.151333333333333 13.9079136387479 4.97451933926301 -0.361666666666667 -0.151333333333333 0.040663863243725 0.318088571727118 -2.676026804986 -1.09916535775634 A0JNW5 UHRF1BP1L A0JNW5.S891.p_UHRF1BP1L A0JNW5_S891s_1_1_891_891 A0JNW5 A0JNW5|A0A0C4DGH6 UHRF1-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.31136.31136.3 17.62 17.62 3.069 8 1 1 0 1097.2091 3208.6666 S891s N902n TMT10 884 (K) SPVSESVsPVVPDYLPTEnGDFLSSK (R) S(0.0)PVS(0.0)ES(0.0)VS(0.99)PVVPDY(0.0)LPT(0.0)EN(1.0)GDFLS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated UHRF1BP1L 165621.9 1 7 398.1 328.88 HUMAN 1 -13.9079 -4.9745 SPVSPKLSPGNSGNY-p Q9UHB7;S1062-p SPVSPKLSPGNSGNY 0.569025067656265 0.111914798892702 -0.114333333333333 0.188 4.50552775344296 12.5535337377322 -0.114333333333333 0.188 0.354362065685073 0.0555452116856452 -1.01260986527886 2.42963998589359 Q9UHB7 AFF4 Q9UHB7.S1062.p_AFF4 Q9UHB7_S1062s _1_1_1062_1062 Q9UHB7 Q9UHB7 AF4/FMR2 family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17419.17419.4 12.67 7.79 2.138 12 1 1 0 784.889 3056.5537 S1062s TMT10 1061 (K) LsPGNSGNYSSGASSASASGSSVTIPQK (I) LS(0.99)PGNS(0.0)GNY(0.0)S(0.0)S(0.0)GAS(0.0)S(0.0)AS(0.0)AS(0.0)GS(0.0)S(0.0)VT(0.0)IPQK K:TMT10,s:Phosphorylated S AFF4 127856.3 4 24 137.1 525.98 HUMAN 1 -4.5055 12.5535 SPVSRTPSLPAVDTS-p O75925-2;S512-p SPVSRTPSLPAVDTS 0.523162183518031 0.76713450439019 0.0903333333333333 -0.0286666666666667 5.20394527531876 1.59124346919925 0.0903333333333333 -0.0286666666666667 0.301720954168721 0.693227293201073 1.14130420235075 -0.416203754072304 O75925 PIAS1 O75925.2.S512.p_PIAS1 O75925-2_S512s_1_1_512_512 O75925-2 O75925-2 Isoform 2 of E3 SUMO-protein ligase PIAS1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29931.29931.3 17.64 17.64 1.237 8 1 1 0 888.775 2583.3504 S512s N522n TMT10 510 (R) TPsLPAVDTSYInTSLIQDYR (H) T(0.0)PS(0.99)LPAVDT(0.0)S(0.0)Y(0.0)IN(1.0)T(0.0)S(0.0)LIQDY(0.0)R s:Phosphorylated S,n:Deamidated PIAS1 73172.1 2 4 3137.1 59.72 HUMAN 1 5.2039 -1.5912 SPVSSQQSLKNLRER-p Q8IWJ2;S1490-p SPVSSQQSLKNLRER 0.130013664511896 0.234267578089671 0.261666666666667 -0.139333333333333 18.32622482901 8.29952051854257 0.261666666666667 -0.139333333333333 0.0147020371934116 0.147927169767971 3.52859036817583 -1.68652774155105 Q8IWJ2 GCC2 Q8IWJ2.S1490.p_GCC2 Q8IWJ2_S1490s _1_1_1490_1490 Q8IWJ2 Q8IWJ2 GRIP and coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10438.10438.3 7.41 7.41 1.415 4 1 1 0 533.6244 1518.8892 S1490s TMT10 1483 (R) SPVSSQQsLK (N) S(0.0)PVS(0.0)S(0.0)QQS(0.99)LK K:TMT10,s:Phosphorylated S GCC2 196990.2 2 93 9.3 1298.62 HUMAN 1 18.3262 -8.2995 SPVTKRRSPSLSSKH-p A9Z1X7;S662-p SPVTKRRSPSLSSKH 0.191404434921086 0.806189485694931 0.215666666666667 0.0246666666666667 14.0163921266427 1.30975843972722 0.215666666666667 0.0246666666666667 0.0396607376453342 0.739646414015365 2.69592860825155 0.349833503067537 A9Z1X7 NotFound A9Z1X7.S662.p_NotFound A9Z1X7_S662s _1_1_662_662 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3301.3301.3 10.76 10.76 3.385 4 1 1 0 442.9078 1246.7429 S662s Hydrogen 660 (K) RRsPSLSSK (H) RRS(0.99)PS(0.0)LS(0.0)S(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S SRRM1 103445.7 14 34 8.1 1346.57 HUMAN 1 14.0164 1.3098 SPYEAENSGEELDQR-p Q9NPC7;S289-p SPYEAENSGEELDQR 0.209461411369469 0.77365322648986 -0.197666666666667 -0.0336666666666666 13.1057628728335 1.54151421427743 -0.197666666666667 -0.0336666666666667 0.0489129338125352 0.701210771139983 -2.53014240893895 -0.404647044561047 Q9NPC7 MYNN Q9NPC7.S289.p_MYNN Q9NPC7_S289s _1_1_289_289 Q9NPC7 Q9NPC7|Q9NPC7-2|Q9NPC7-3 Myoneurin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10250.10250.2 17.1 11.63 7.58 3 1 1 0 1016.9366 1952.9035 S289s TMT10 282 (K) SPYEAENsGEELDQR (Y) S(0.0)PY(0.0)EAENS(0.99)GEELDQR s:Phosphorylated S MYNN 70049.9 3 36 394.3 330.8 HUMAN 1 -13.1058 -1.5415 SPYFINTSKGQKCEF-p P10809;S232-p SPYFINTSKGQKCEF 0.59052057106021 0.201474091191155 -0.105333333333333 0.165 4.21644536784005 9.1541813553066 -0.105333333333333 0.165 0.378752460829057 0.121501562921929 -0.958283757883085 1.83438351357827 P10809 HSPD1 P10809.S232.p_HSPD1 P10809_S232s _1_1_232_232 P10809 P10809 60 kDa heat shock protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25195.25195.3 13.55 13.55 1.11 5 1 1 0 643.338 1848.0308 S232s TMT10 222 (R) GYISPYFINTsK (G) GY(0.0)IS(0.0)PY(0.0)FINT(0.0)S(0.99)K K:TMT10,s:Phosphorylated S HSPD1 61224.7 1 5 1165.1 170.59 HUMAN 1 -4.2164 9.1542 SPYIDGCSPIKNWSP-p A0A087WV86;S400-p SPYIDGCSPIKNWSP 0.395304354889455 0.001224750841271 -0.147666666666667 -1.12933333333333 7.43659667869308 47.8618291856914 -0.147666666666667 -1.12933333333333 0.180443121809552 1.6361272630904e-05 -1.53724124168153 -14.3029727070757 A0A087WV86 BORA A0A087WV86.S400.p_BORA A0A087WV86_S400s _1_1_400_400 A0A087WV86 A0A087WV86|B5LMG6|Q6PGQ7|Q6PGQ7-2 Protein aurora borealis HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16427.16427.3 9.27 9.27 5.675 3 1 1 0 592.3014 1694.9188 S400s TMT10 393 (R) SPYIDGCsPIK (N) S(0.0)PY(0.0)IDGCS(0.99)PIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BORA 69923.5 2 6 1228.1 164.27 HUMAN 1 -7.4366 -47.8618 SPYKRDNTFFRESPV-p F8W0Q9;T146-p SPYKRDNTFFRESPV 0.545810049315497 0.987660257182692 -0.136333333333333 0.00366666666666665 4.85416056088308 0.0814835960612997 -0.136333333333333 0.00366666666666671 0.327027251169018 0.981412624776359 -1.07726324822372 0.0243918103940072 F8W0Q9 NotFound F8W0Q9.T146.p_NotFound F8W0Q9_T146t _1_1_146_146 F8W0Q9 Q8NEY8|Q8NEY8-3|F8W0Q9|Q8NEY8-2|Q8NEY8-8|F8W6A0|Q8NEY8-9|B7Z8L1|Q8NEY8-6|F8WF16|Q8NEY8-5 Periphilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12654.12654.5 9.08 9.08 1.233 2 1 1 0 419.0213 2011.1125 T146t TMT10 144 (R) DNtFFRESPVGRK (D) DNT(0.99)FFRES(0.0)PVGRK K:TMT10,t:Phosphorylated T PPHLN1 44796.3 4 6 663.1 251.09 HUMAN 1 -4.8542 0.0815 SPYQSRGSPHYFSPF-p Q13242;S211-p SPYQSRGSPHYFSPF 0.267978150841997 0.185807932111219 0.178 0.222 10.8369362685135 9.61252752920317 0.178 0.222 0.0824719708566666 0.109331988518895 2.12756578484991 1.91372427347948 Q13242 SRSF9 Q13242.S211.p_SRSF9 Q13242_S211s _1_1_211_211 Q13242 Q13242 Serine/arginine-rich splicing factor 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17767.18203.3 15.24 15.24 3.373 4 1 1 0 512.2225 1454.6852 S211s Hydrogen 210 (R) GsPHYFSPFRPY (-) GS(0.99)PHY(0.0)FS(0.0)PFRPY(0.0) s:Phosphorylated S SRSF9 25655.9 45 4 2246.1 91.74 HUMAN 1 10.8369 9.6125 SPYRIRATQTGDASK-p O75369-8;T1640-p SPYRIRATQTGDASK 0.959595786052306 0.0140093853411862 0.0136666666666667 0.763333333333333 0.346761863248199 25.721256254313 0.0136666666666667 0.763333333333333 0.923259560798162 0.00267839345197093 0.100904568531929 5.22203478561468 O75369 FLNB O75369.8.T1640.p_FLNB O75369-8_T1640t _1_1_1640_1640 O75369-8 O75369-8|O75369-9|O75369-2 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6583.6583.3 9.44 5.31 2.4 3 1 1 0 562.6382 1605.9324 T1640t TMT10 1637 (R) IRAtQTGDASK (C) IRAT(0.99)QT(0.0)GDAS(0.0)K K:TMT10,t:Phosphorylated T FLNB 283797.6 1 29 67.1 680.07 HUMAN 1 0.3468 25.7213 SPYRREDSMEDRGEE-p P21127;S72-p SPYRREDSMEDRGEE 0.843942307663143 0.929264722389813 -0.0463333333333333 0.00933333333333334 1.42697578574105 0.449794549084559 -0.0463333333333334 0.00933333333333335 0.719950141539863 0.901613789079699 -0.377798780708223 0.129522198915973 P21127 CDK11B P21127.S72.p_CDK11B P21127_S72s _1_1_72_72 P21127 P21127|Q5QPR4|P21127-6|Q9UQ88-9|E7ESP2|J3KS35|A0A087X1I0|J3QR44|P21127-2|B7ZVY7|P21127-3|Q9UQ88-2|Q9UQ88-3|Q5QPR3|P21127-8|Q9UQ88-4|P21127-9|J3QR29|A0A087WYI9 Cyclin-dependent kinase 11B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11412.11412.5 14.21 7.62 2.033 5 1 1 0 815.7878 3994.9387 S72s TMT10 64 (R) NSPYRREDsMEDRGEEDDSLAIKPPQQMSR (K) NS(0.0)PY(0.0)RREDS(0.99)MEDRGEEDDS(0.0)LAIKPPQQMS(0.0)R K:TMT10,s:Phosphorylated S CDK11B 92876.5 2 4 421.1 320.22 HUMAN 1 -1.427 0.4498 SQAASSDSAQGSDMS-p A0A140T8Y4;S358-p SQAASSDSAQGSDMS 0.0932391121930034 0.870006215796507 0.347666666666667 0.0166666666666667 21.9097514262893 0.852257502741557 0.347666666666667 0.0166666666666667 0.00644206136379042 0.821815351706235 4.30132221423774 0.236373988559146 A0A140T8Y4 NotFound A0A140T8Y4.S358.p_NotFound A0A140T8Y4_S358sS362sS365s_3_3_358_365 A0A140T8Y4 A0A140T8Y4|P18462|P30450|P30512|P16189|P10314|P16190|P30453|P30456|P30457|P30459|B0UXQ0|Q9GJ45 HLA class I histocompatibility antigen, A-3 alpha chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12981.12981.4 12.08 12.08 2 9 3 3 0 884.8932 3280.6393 S358s S362s M364m S365s TMT10 346 (R) KGGSYSQAASSDsAQGsDmsLTACKV (-) KGGS(0.0)Y(0.0)S(0.0)QAAS(0.0)S(0.0)DS(0.99)AQGS(0.99)DM(1.0)S(0.99)LT(0.0)ACKV K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine HLA-A 41906 4 4 3870.1 41.51 HUMAN 1 21.9098 0.8523 SQAGMTAYGTRRHLY-p Q15417;Y182-p SQAGMTAYGTRRHLY 0.865557686443598 0.548572561136501 -0.074 0.072 1.21846777357736 3.50732666364666 -0.074 0.072 0.755358677374011 0.445930660313758 -0.327815340623264 0.821572789625699 Q15417 CNN3 Q15417.Y182.p_CNN3 Q15417_Y182y _1_1_182_182 Q15417 Q15417|Q15417-2|Q15417-3 Calponin-3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.6063.6063.3 20.37 20.37 4.708 4 1 1 0 613.6135 1758.8577 Y182y TMT10 173 (K) CASQAGMTAyGTRR (H) CAS(0.0)QAGMT(0.0)AY(0.99)GT(0.0)RR C:Carbamidomethylation,y:Phosphorylated Y CNN3 36584.2 2 1 166.1 20.37 HUMAN 1 -1.2185 3.5073 SQAHVRVSPGQAAPA-p Q96HA7-2;S719-p SQAHVRVSPGQAAPA 0.483726315617236 0.00921186136611541 0.108666666666667 -0.494666666666667 5.81054840951623 28.7706124044866 0.108666666666667 -0.494666666666667 0.262388718859619 0.00132720729324947 1.25073984927589 -6.05753936098852 Q96HA7 TONSL Q96HA7.2.S719.p_TONSL Q96HA7-2_S719s _1_1_719_719 Q96HA7-2 Q96HA7|Q96HA7-2 Isoform 2 of Tonsoku-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10161.10161.3 18.49 18.49 99 1 1 1 0 573.297 1637.9107 S719s TMT10 718 (R) VsPGQAAPAMARPR (R) VS(1.0)PGQAAPAMARPR s:Phosphorylated S TONSL 153116 4 3 2325.1 87.84 HUMAN 1 5.8105 -28.7706 SQALNGDSDSEDMLN-p Q9NSI6-2;S2018-p SQALNGDSDSEDMLN 0.53706412572523 0.659300010506872 0.0846666666666667 -0.044 4.99118412930446 2.47490343040911 0.0846666666666667 -0.044 0.316870337974163 0.565600333621401 1.10244229580373 -0.611503533993334 Q9NSI6 BRWD1 Q9NSI6.2.S2018.p_BRWD1 Q9NSI6-2_S2018sS2020s_2_2_2018_2020 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21311.21524.3 14.39 14.39 4.801 4 2 2 0 969.7679 2747.3558 S2018s S2020s TMT10 2009 (K) VLSQALNGDsDsEDMLNSEHK (H) VLS(0.0)QALNGDS(0.99)DS(0.99)EDMLNS(0.0)EHK K:TMT10,s:Phosphorylated S BRWD1 259915.1 2 33 208.1 444.81 HUMAN 1 4.9912 -2.4749 SQANGSVSPDSVGGG-p Q68CZ2;S732-p SQANGSVSPDSVGGG 0.885820345057877 0.888836384256751 -0.0213333333333333 -0.017 1.03625709459949 0.71940823444543 -0.0213333333333333 -0.017 0.787724386324478 0.847342864412345 -0.282948572883905 -0.201914875403121 Q68CZ2 TNS3 Q68CZ2.S732.p_TNS3 Q68CZ2_S732s_1_1_732_732 Q68CZ2 Q68CZ2|Q68CZ2-2 Tensin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.35966.35966.5 23.45 23.45 1.159 6 1 1 0 821.011 4019.0745 N721n N728n S732s TMT10 705 (R) LILELDPTFEPIPTHMnALGSQAnGSVsPDSVGGGLR (A) LILELDPT(0.0)FEPIPT(0.0)HMN(1.0)ALGS(0.0)QAN(1.0)GS(0.0)VS(0.99)PDS(0.0)VGGGLR n:Deamidated,s:Phosphorylated S TNS3 156460.9 22 8 183.1 477.16 HUMAN 1 -1.0363 -0.7194 SQARGEGSPSEATRL-p Q5T0Z8;S736-p SQARGEGSPSEATRL 0.860382671344076 0.470338489723559 0.0276666666666667 -0.0863333333333333 1.27575818347254 4.36622938766753 0.0276666666666667 -0.0863333333333333 0.745459719654059 0.365912344537526 0.341687463928935 -0.986340237580909 Q5T0Z8 C6orf132 Q5T0Z8.S736.p_C6orf132 Q5T0Z8_S736s _1_1_736_736 Q5T0Z8 Q5T0Z8 Uncharacterized protein C6orf132 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6500.6500.2 11.47 11.47 2.315 4 1 1 0 897.4128 1713.8515 S736s Hydrogen 733 (R) GEGsPSEATRLPTQGAR (S) GEGS(0.99)PS(0.0)EAT(0.0)RLPT(0.0)QGAR s:Phosphorylated S C6orf132 124488.2 7 14 336.1 355.09 HUMAN 1 1.2758 -4.3662 SQARGSDSEDGEFEI-p Q8TDD1-2;S41-p SQARGSDSEDGEFEI 0.179935774950283 0.0394283939334698 0.256666666666667 0.574 14.698867481921 18.8391732437464 0.256666666666667 0.574 0.0338932528703984 0.0130641956449986 2.82216200536483 3.63098530889592 Q8TDD1 DDX54 Q8TDD1.2.S41.p_DDX54 Q8TDD1-2_S41s _1_1_41_41 Q8TDD1-2 Q8TDD1|Q8TDD1-2 Isoform 2 of ATP-dependent RNA helicase DDX54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14696.14696.3 16.54 16.54 1.227 2 1 1 0 760.3126 2198.9523 S41s TMT10 38 (R) GSDsEDGEFEIQAEDDAR (A) GS(0.0)DS(0.99)EDGEFEIQAEDDAR s:Phosphorylated S DDX54 98949.4 2 1 373.1 338.92 HUMAN 1 14.6989 18.8392 SQCAGRCSPPRCWTP-p Q5TGY3;S633-p SQCAGRCSPPRCWTP 0.424841009743371 0.0167159554078248 0.158666666666667 -0.553666666666667 6.85195012028398 24.5302504378821 0.158666666666667 -0.553666666666667 0.206445294265275 0.00352350552002301 1.43507216020591 -4.91978842854243 Q5TGY3 AHDC1 Q5TGY3.S633.p_AHDC1 Q5TGY3_S633s _1_1_633_633 Q5TGY3 Q5TGY3 AT-hook DNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3521.3521.3 12.17 7.72 5.13 2 1 1 0 571.5914 1632.7896 S633s TMT10 625 (R) QSQCAGRCsPPR (C) QS(0.0)QCAGRCS(0.99)PPR C:Carbamidomethylation,s:Phosphorylated S AHDC1 170057.9 1 6 334.1 355.89 HUMAN 1 6.852 -24.5303 SQCSSKDSDSEESDC-p Q9UQ84;S700-p SQCSSKDSDSEESDC 0.209993844122685 0.000952253650599092 -0.231 -2.284 13.0815210289535 66.8000539382871 -0.231 -2.284 0.0491867238917525 2.08927018248042e-07 -2.52576700623035 -32.2586261221385 Q9UQ84 EXO1 Q9UQ84.S700.p_EXO1 Q9UQ84_S700s _1_1_700_700 Q9UQ84 Q9UQ84|Q9UQ84-4 Exonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10911.10911.3 14.76 14.76 1.231 6 1 1 0 986.1218 2876.3857 S700s TMT10 692 (K) LSQCSSKDsDSEESDCNIK (L) LS(0.0)QCS(0.0)S(0.0)KDS(0.99)DS(0.0)EES(0.0)DCNIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EXO1 95242.6 2 7 1477.1 139.01 HUMAN 1 -13.0815 -66.8001 SQDADLKTPTKPKQH-p Q9P0K7;T249-p SQDADLKTPTKPKQH 0.249157518555538 0.000993050805672115 -0.195 -1.305 11.5161544742631 52.797767164614 -0.195 -1.305 0.0705317326370392 5.25077348539673e-06 -2.24679590790546 -17.7074073158059 Q9P0K7 RAI14 Q9P0K7.T249.p_RAI14 Q9P0K7_T249t _1_1_249_249 Q9P0K7 Q9P0K7|Q9P0K7-3|Q9P0K7-4 Ankycorbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13202.13202.5 12.73 12.73 3.227 3 1 1 0 508.5013 2458.5051 T249t TMT10 241 (K) ISQDADLKtPTKPK (Q) IS(0.0)QDADLKT(0.99)PT(0.0)KPK K:TMT10,t:Phosphorylated T RAI14 110666.9 3 4 498.1 292.24 HUMAN 1 -11.5162 -52.7978 SQDDESDSDAEEEQT-p Q13769;S314-p SQDDESDSDAEEEQT 0.597918768837268 0.109388168632839 -0.0986666666666667 0.239333333333333 4.12419208351655 12.6944190764936 -0.0986666666666667 0.239333333333333 0.386884019835925 0.0537722355441797 -0.940795814786425 2.45483672925939 Q13769 THOC5 Q13769.S314.p_THOC5 Q13769_S314s _1_1_314_314 Q13769 Q13769 THO complex subunit 5 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17565.17565.4 13.88 13.88 1.256 5 1 1 0 895.4144 3498.6851 S314s TMT10 299 (K) ALFKPPEDSQDDESDsDAEEEQTTK (R) ALFKPPEDS(0.0)QDDES(0.0)DS(0.99)DAEEEQT(0.0)T(0.0)K K:TMT10,s:Phosphorylated S THOC5 79248.1 3 4 2086.1 98.12 HUMAN 1 -4.1242 12.6944 SQDEGEGSGESERGS-p Q9UQE7;S1074-p SQDEGEGSGESERGS 0.503139755854697 0.0290595433418898 0.101333333333333 0.393333333333333 5.50378996295222 20.8042696360843 0.101333333333333 0.393333333333333 0.281592448245909 0.00830946449299283 1.19563169705221 4.04973537952947 Q9UQE7 SMC3 Q9UQE7.S1074.p_SMC3 Q9UQE7_S1074s _1_1_1074_1074 Q9UQE7 Q9UQE7 Structural maintenance of chromosomes protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17074.17074.4 24.41 24.41 2.325 10 1 1 0 1163.5411 4571.177 S1074s TMT10 1059 (K) KGDVEGSQSQDEGEGsGESERGSGSQSSVPSVDQFTGVGIR (V) KGDVEGS(0.0)QS(0.0)QDEGEGS(0.99)GES(0.0)ERGS(0.0)GS(0.0)QS(0.0)S(0.0)VPS(0.0)VDQFT(0.0)GVGIR K:TMT10,s:Phosphorylated S SMC3 141938.5 3 5 1472.1 139.47 HUMAN 1 5.5038 20.8043 SQDLYNASPEPKTLF-p Q9HAW4;S846-p SQDLYNASPEPKTLF 0.701391719781544 0.00558876802431973 -0.0526666666666667 -0.633666666666667 2.89754286658552 32.6453349125778 -0.0526666666666667 -0.633666666666667 0.513151630690306 0.000543834191529681 -0.699524147879558 -7.2662582768758 Q9HAW4 CLSPN Q9HAW4.S846.p_CLSPN Q9HAW4_S846s _1_1_846_846 Q9HAW4 Q9HAW4|Q9HAW4-3|E7ESG2|Q9HAW4-2 Claspin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26185.26185.3 21.58 20.57 1.694 5 1 1 0 989.8264 2887.4977 S846s TMT10 829 (K) LSEPSLPIEDSQDLYNAsPEPK (T) LS(0.0)EPS(0.0)LPIEDS(0.0)QDLY(0.0)NAS(0.99)PEPK K:TMT10,s:Phosphorylated S CLSPN 151718.8 5 8 506.1 289.61 HUMAN 1 -2.8975 -32.6453 SQDMRQISDGEREEL-p O95816;S73-p SQDMRQISDGEREEL 0.949392311069458 0.159491398832952 -0.01 -0.160666666666667 0.445910654265027 10.486953226206 -0.01 -0.160666666666667 0.902420462789599 0.0893932398136498 -0.128465199382414 -2.06557110371149 O95816 BAG2 O95816.S73.p_BAG2 O95816_S73s _1_1_73_73 O95816 O95816|O95816-2 BAG family molecular chaperone regulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13417.13417.3 11.83 11.83 11.827 2 1 1 0 718.6844 2074.0726 S73s TMT10 71 (R) QIsDGEREELNLTANR (L) QIS(0.99)DGEREELNLT(0.0)ANR s:Phosphorylated S BAG2 23942.7 1 2 5434.1 19.32 HUMAN 1 -0.4459 -10.487 SQDRKAVSPSSSEKR-p Q76FK4;S660-p SQDRKAVSPSSSEKR 0.184847781389892 0.00255239651556173 0.464 -1.14066666666667 14.4197022792059 39.6264019357206 0.464 -1.14066666666667 0.0361434639127457 0.000108983262930889 2.77030772561792 -9.96458258018775 Q76FK4 NOL8 Q76FK4.S660.p_NOL8 Q76FK4_S660s _1_1_660_660 Q76FK4 Q76FK4|Q76FK4-4|Q76FK4-2|F5H101 Nucleolar protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6995.6995.2 13.12 7.56 2.004 4 1 1 0 715.3709 1349.7677 S660s TMT10 658 (K) AVsPSSSEK (R) AVS(0.99)PS(0.0)S(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S NOL8 132527 9 4 605.1 262.45 HUMAN 1 14.4197 -39.6264 SQDSYPGSPSLSPRH-p R4GMX8;S365-p SQDSYPGSPSLSPRH 0.622878498057638 0.780047555710737 -0.0776666666666667 -0.027 3.82002144420876 1.49341709110661 -0.0776666666666667 -0.027 0.414951993716056 0.709019681609463 -0.882566347998653 -0.393402843015757 R4GMX8 RANBP10 R4GMX8.S365.p_RANBP10 R4GMX8_S365s _1_1_365_365 R4GMX8 R4GMX8|Q6VN20|A0A0D9SEU5|Q6VN20-3|Q6VN20-2 Ran-binding protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10825.10825.3 12.85 12.85 4.681 6 1 1 0 596.2802 1706.8547 S365s TMT10 358 (K) SQDSYPGsPSLSPR (H) S(0.0)QDS(0.0)Y(0.0)PGS(0.99)PS(0.0)LS(0.0)PR s:Phosphorylated S RANBP10 71282.8 3 10 1268.1 160.1 HUMAN 1 -3.82 -1.4934 SQDSYPVSPRPFSSP-p Q96S59;S477-p SQDSYPVSPRPFSSP 0.373380145180951 0.041636245514941 0.152333333333333 0.390666666666667 7.92849500294293 18.5042637166274 0.152333333333333 0.390666666666667 0.161120388242706 0.0141115145646377 1.62275390423392 3.56202756613132 Q96S59 RANBP9 Q96S59.S477.p_RANBP9 Q96S59_S477sS482sS483s_3_3_477_483 Q96S59 Q96S59|Q96S59-3|Q96S59-2 Ran-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21046.21046.4 15.07 15.07 1.225 10 3 3 0 1025.2089 3857.9103 S477s S482s S483s TMT10 470 (K) SQDSYPVsPRPFssPSMSPSHGMNIHNLASGK (G) S(0.0)QDS(0.0)Y(0.0)PVS(0.99)PRPFS(0.99)S(0.99)PS(0.0)MS(0.0)PS(0.0)HGMNIHNLAS(0.0)GK K:TMT10,s:Phosphorylated S RANBP9 78701.8 10 5 1268.2 160.1 HUMAN 1 7.9285 18.5043 SQECSPRSCPELTSG-p Q13111;S206-p SQECSPRSCPELTSG 0.3230069107756 0.206494358985813 0.161666666666667 -0.267333333333333 9.18882501518742 9.01250420134716 0.161666666666667 -0.267333333333333 0.120536200725515 0.125530592841329 1.84105443081826 -1.80987542860025 Q13111 CHAF1A Q13111.S206.p_CHAF1A Q13111_S206s _1_1_206_206 Q13111 Q13111|Q13111-3 Chromatin assembly factor 1 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9332.9332.2 7.58 7.58 7.575 3 1 1 0 706.8254 1332.6779 S206s TMT10 206 (R) sCPELTSGPR (M) S(0.99)CPELT(0.0)S(0.0)GPR C:Carbamidomethylation,s:Phosphorylated S CHAF1A 108122.1 1 7 633.1 256.49 HUMAN 1 9.1888 -9.0125 SQEDKDDSVVLPLGA-p Q9Y6G9;S222-p SQEDKDDSVVLPLGA 0.246863210495205 0.0240742085490205 -0.19 -0.357333333333333 11.6154479788426 22.0567267322784 -0.19 -0.357333333333333 0.0689374479877336 0.00622769488287948 -2.26430556181389 -4.33031891955858 Q9Y6G9 DYNC1LI1 Q9Y6G9.S222.p_DYNC1LI1 Q9Y6G9_S222s _1_1_222_222 Q9Y6G9 Q9Y6G9|E9PHI6 Cytoplasmic dynein 1 light intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.33630.33630.4 19.76 16.13 2.544 6 1 1 0 1122.6013 4407.4048 S222s TMT10 212 (R) NTASQEDKDDsVVLPLGADTLTHNLGIPVLVVCTK (C) NT(0.0)AS(0.0)QEDKDDS(0.99)VVLPLGADT(0.0)LT(0.0)HNLGIPVLVVCT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DYNC1LI1 56863.4 2 6 510.1 287.75 HUMAN 1 -11.6154 -22.0567 SQEDSEDSEDKDVKT-p Q9H1E3;S61-p SQEDSEDSEDKDVKT 0.114688242267433 0.0185872547845839 1.01966666666667 -0.594333333333333 19.5789017113874 23.8162704138604 1.01966666666667 -0.594333333333333 0.0110181791337306 0.00415310545334515 3.78915527472971 -4.74452797842214 Q9H1E3 NUCKS1 Q9H1E3.S61.p_NUCKS1 Q9H1E3_S61s _1_1_61_61 Q9H1E3 Q9H1E3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6634.6634.3 15.69 12.25 2.375 4 1 1 0 998.4968 2913.5095 S61s TMT10 50 (R) SGKNSQEDSEDsEDKDVK (T) S(0.0)GKNS(0.0)QEDS(0.0)EDS(0.99)EDKDVK K:TMT10,s:Phosphorylated S NUCKS1 27295.9 7 7 48.1 767.83 HUMAN 1 19.5789 -23.8163 SQEEGPLSPFLGQLD-p Q5VUA4;S214-p SQEEGPLSPFLGQLD 0.967999964697356 0.645100209529137 0.006 0.0546666666666667 0.275400139800622 2.59547752079361 0.006 0.0546666666666667 0.938555558314459 0.550113430438841 0.0807338483370694 0.636896797491559 Q5VUA4 ZNF318 Q5VUA4.S214.p_ZNF318 Q5VUA4_S214s _1_1_214_214 Q5VUA4 Q5VUA4|Q5VUA4-2 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31267.31267.3 22.52 18.8 5.088 5 1 1 0 1075.203 3143.6301 S214s TMT10 205 (R) YISQEEGPLsPFLGQLDEDYRTK (E) Y(0.0)IS(0.0)QEEGPLS(0.99)PFLGQLDEDY(0.0)RT(0.0)K K:TMT10,s:Phosphorylated S ZNF318 252762.4 9 8 37.1 870.88 HUMAN 1 0.2754 2.5955 SQEELSPSPPLLNPS-p Q8N5Y2;S311-p SQEELSPSPPLLNPS 0.430550536818263 0.0216909765836911 0.124 0.309666666666667 6.73838745188911 22.7482913692368 0.124 0.309666666666667 0.211914783497542 0.00531093349476203 1.41513704219462 4.49021660851242 Q8N5Y2 MSL3 Q8N5Y2.S311.p_MSL3 Q8N5Y2_S311s _1_1_311_311 Q8N5Y2 Q8N5Y2|Q8N5Y2-3|Q8N5Y2-2|Q8N5Y2-5|Q8N5Y2-6|Q8N5Y2-4 Male-specific lethal 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21066.21066.3 20.77 19.84 1.977 11 1 1 0 1324.3264 3890.9911 S311s TMT10 304 (R) SQEELSPsPPLLNPSTPQSTESQPTTGEPATPK (R) S(0.0)QEELS(0.0)PS(0.99)PPLLNPS(0.0)T(0.0)PQS(0.0)T(0.0)ES(0.0)QPT(0.0)T(0.0)GEPAT(0.0)PK K:TMT10,s:Phosphorylated S MSL3 60279.1 6 1 1755.1 117.41 HUMAN 1 6.7384 22.7483 SQEETKLSVEESEAA-p P49321-3;S430-p SQEETKLSVEESEAA 0.373228695696441 0.0143603080775264 0.122666666666667 0.359333333333333 7.93429381481895 25.5503689921692 0.122666666666667 0.359333333333333 0.160905399707976 0.0027858844598379 1.62376023227822 5.1778836406676 P49321 NASP P49321.3.S430.p_NASP P49321-3_S430s _1_1_430_430 P49321-3 P49321|P49321-4|P49321-3 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20251.20251.4 17.63 17.63 1.116 5 1 1 0 847.1855 3305.7567 S430s TMT10 420 (K) LVPSQEETKLsVEESEAAGDGVDTK (V) LVPS(0.0)QEET(0.0)KLS(0.99)VEES(0.0)EAAGDGVDT(0.0)K K:TMT10,s:Phosphorylated S NASP 86552 2 16 87.1 626.46 HUMAN 1 7.9343 25.5504 SQEFSGRSLDRLPKT-p Q9NYA4;S601-p SQEFSGRSLDRLPKT 0.838645264365159 0.0232251310177084 0.089 -0.712666666666667 1.47879596486789 22.3013694462482 0.0890000000000001 -0.712666666666667 0.711410717349706 0.0058865800652894 0.390012746733168 -4.38646644782439 Q9NYA4 MTMR4 Q9NYA4.S601.p_MTMR4 Q9NYA4_S601s _1_1_601_601 Q9NYA4 Q9NYA4|J3QR65 Myotubularin-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13241.13241.3 8.69 4.35 99 1 1 1 0 456.2678 1286.8196 S601s TMT10 601 (R) sLDRLPK (T) S(1.0)LDRLPK K:TMT10,s:Phosphorylated S MTMR4 136374.8 1 2 1690.1 120.8 HUMAN 1 1.4788 -22.3014 SQEGPVKSPAECREE-p Q9C0C2;S228-p SQEGPVKSPAECREE 0.0387809009895526 0.0151392001118259 -0.700333333333333 -0.618333333333333 32.0016216540607 25.1767584153809 -0.700333333333334 -0.618333333333334 0.000630721789211604 0.00303615653330929 -7.06500666093703 -5.08228213632884 Q9C0C2 TNKS1BP1 Q9C0C2.S228.p_TNKS1BP1 Q9C0C2_S228s _1_1_228_228 Q9C0C2 Q9C0C2|E9PKK0 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8094.8120.5 18.64 18.64 2.616 3 1 1 0 613.9084 2985.5456 S228s TMT10 219 (R) GWSQEGPVKsPAECREEHSK (T) GWS(0.0)QEGPVKS(0.99)PAECREEHS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TNKS1BP1 182819.3 8 6 4.1 2105.7 HUMAN 1 -32.0016 -25.1768 SQEKQGRSEGEGKPQ-p Q969E4;S72-p SQEKQGRSEGEGKPQ 0.146270525101547 0.00925004074850009 -0.414333333333333 0.757333333333333 17.0019420330732 28.7298685945033 -0.414333333333333 0.757333333333333 0.0199437029369419 0.00133971722294992 -3.26301731307017 6.04574737351381 Q969E4 TCEAL3 Q969E4.S72.p_TCEAL3 Q969E4_S72s _1_1_72_72 Q969E4 Q969E4 Transcription elongation factor A protein-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.4220.4220.5 13.84 8.71 13.842 3 1 1 0 764.2089 3737.0501 S72s TMT10 69 (K) QGRsEGEGKPQGEGKPASQAKPESQPR (A) QGRS(0.99)EGEGKPQGEGKPAS(0.0)QAKPES(0.0)QPR K:TMT10,s:Phosphorylated S TCEAL3 22616 1 2 943.1 197.95 HUMAN 1 -17.0019 28.7299 SQEMSVNSPTAQESQ-p Q9NUA8;S190-p SQEMSVNSPTAQESQ 0.219002866960347 0.00488459422585612 -0.267333333333333 0.610333333333333 12.70408695869 33.7502008217562 -0.267333333333333 0.610333333333334 0.0536526656550679 0.000421677004245884 -2.45787919125397 7.64525688518624 Q9NUA8 ZBTB40 Q9NUA8.S190.p_ZBTB40 Q9NUA8_S190s _1_1_190_190 Q9NUA8 Q9NUA8|F8WAI8|Q9NUA8-2 Zinc finger and BTB domain-containing protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12135.12135.3 28.43 28.43 1.789 7 1 1 0 1038.1307 3032.4065 S190s TMT10 173 (K) AETEEAAHSVSQEMSVNsPTAQESQR (N) AET(0.0)EEAAHS(0.0)VS(0.0)QEMS(0.0)VNS(0.99)PT(0.0)AQES(0.0)QR s:Phosphorylated S ZBTB40 140797.4 3 1 1500.1 135.98 HUMAN 1 -12.7041 33.7502 SQENMRSSPNPFITG-p J3KQV8;S1431-p SQENMRSSPNPFITG 0.351536663952324 0.245800165723255 0.152666666666667 0.165666666666667 8.43476076347843 8.03225429120599 0.152666666666667 0.165666666666667 0.14339167029668 0.15731660696067 1.71050915458365 1.64023332364392 J3KQV8 SYNJ1 J3KQV8.S1431.p_SYNJ1 J3KQV8_S1431s _1_1_1431_1431 J3KQV8 J3KQV8|O43426|A0A0D9SGJ6 Synaptojanin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22575.22575.2 9.7 3.52 1.404 4 1 1 0 799.9116 1518.8478 S1431s TMT10 1430 (R) SsPNPFITGLTR (T) S(0.0)S(0.99)PNPFIT(0.0)GLT(0.0)R s:Phosphorylated S SYNJ1 178858.1 4 10 677.1 246.73 HUMAN 1 8.4348 8.0323 SQEPGRQTPDRKA__-p Q8TB03;T314-p SQEPGRQTPDRKA__ 0.72370254925658 0.737190732862999 -0.0566666666666667 0.0596666666666667 2.65852085809176 1.82559448133758 -0.0566666666666667 0.0596666666666667 0.542185519219873 0.65681120312389 -0.650157609662931 0.469769815400595 Q8TB03 CXorf38 Q8TB03.T314.p_CXorf38 Q8TB03_T314t _1_1_314_314 Q8TB03 Q8TB03|Q8TB03-2 Uncharacterized protein CXorf38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14608.14608.5 14.57 14.57 1.195 3 1 1 0 712.7796 3479.8996 T314t TMT10 296 (K) LDSLCLHQKLDSQEPGRQtPDRKA (-) LDS(0.0)LCLHQKLDS(0.0)QEPGRQT(0.99)PDRKA C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CXorf38 37468.1 8 1 3645.1 46.18 HUMAN 1 -2.6585 1.8256 SQEPLVRSAELGCTV-p O15020;S2038-p SQEPLVRSAELGCTV 0.922001106175318 0.815228196964363 0.016 -0.0523333333333333 0.691385473775913 1.24141599206802 0.016 -0.0523333333333334 0.852828003876962 0.751377871662147 0.194567296599358 -0.333350959413806 O15020 SPTBN2 O15020.S2038.p_SPTBN2 O15020_S2038s _1_1_2038_2038 O15020 O15020|O15020-2 Spectrin beta chain, non-erythrocytic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.34752.34752.3 17.69 14.24 6.036 3 1 1 0 763.3892 2208.1834 S2038s TMT10 2038 (R) sAELGCTVDEVESLIK (R) S(0.99)AELGCT(0.0)VDEVES(0.0)LIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SPTBN2 272689.3 3 11 781.1 225.92 HUMAN 1 0.6914 -1.2414 SQEVSRRSWGQQAQE-p Q5VZK9;S1331-p SQEVSRRSWGQQAQE 0.0249456258107883 0.0105407926544461 -0.797666666666667 -0.703333333333333 37.0963766250506 27.7252991375024 -0.797666666666667 -0.703333333333333 0.000195147205909962 0.00168837956166107 -8.91764116542027 -5.76057404303368 Q5VZK9 LRRC16A Q5VZK9.S1331.p_LRRC16A Q5VZK9_S1331s _1_1_1331_1331 Q5VZK9 Q5VZK9|Q5VZK9-2 F-actin-uncapping protein LRRC16A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14496.14496.2 16.65 16.65 12.571 2 1 1 0 1074.5128 2068.05 S1331s TMT10 1331 (R) sWGQQAQEYQEQK (Q) S(0.99)WGQQAQEY(0.0)QEQK K:TMT10,s:Phosphorylated S CARMIL1 152809.3 6 16 280.1 388.82 HUMAN 1 -37.0964 -27.7253 SQFDHSDSDDDFVSA-p Q96B01;S21-p SQFDHSDSDDDFVSA 0.193883926313618 0.0195717911533627 -0.222333333333333 -0.380333333333333 13.9055914119431 23.4549069247868 -0.222333333333333 -0.380333333333333 0.0406856125332714 0.00451345698189374 -2.67560123199924 -4.65744771623174 Q96B01 RAD51AP1 Q96B01.S21.p_RAD51AP1 Q96B01_S19sS21s_2_2_19_21 Q96B01 Q96B01|Q96B01-2|Q96B01-3|F5H1Y0|F5H710|F5H031 RAD51-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23025.23091.5 17.22 11.18 3.315 6 2 2 0 755.3601 3612.8425 S19s S21s TMT10 9 (K) KPVNYSQFDHsDsDDDFVSATVPLNK (K) KPVNY(0.0)S(0.0)QFDHS(0.99)DS(0.99)DDDFVS(0.0)AT(0.0)VPLNK K:TMT10,s:Phosphorylated S RAD51AP1 38684.9 6 6 1345.1 151.31 HUMAN 1 -13.9056 -23.4549 SQGCSRETSPNRIGL-p Q7Z460-4;T737-p SQGCSRETSPNRIGL 0.666595970118167 0.976119472292697 0.0593333333333333 0.00400000000000003 3.2941945522015 0.149113064086604 0.0593333333333333 0.00400000000000005 0.468360806080793 0.966248190434645 0.779558540394021 0.0443037268026706 Q7Z460 CLASP1 Q7Z460.4.T737.p_CLASP1 Q7Z460-4_T737t _1_1_737_737 Q7Z460-4 Q7Z460-3|Q7Z460-5|F8WA11|Q7Z460-4|Q7Z460-2 Isoform 4 of CLIP-associating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5811.5811.3 8.83 8.83 1.234 2 1 1 0 446.5455 1257.6546 T737t Hydrogen 736 (R) EtSPNRIGLDR (F) ET(0.99)S(0.0)PNRIGLDR t:Phosphorylated T CLASP1 164028.5 2 46 158.3 498.15 HUMAN 1 3.2942 0.1491 SQGERLLSREAPEEL-p Q71F56;S2083-p SQGERLLSREAPEEL 0.153364244244344 0.0240816793421373 -0.322 0.306 16.3706618843587 22.0539821042868 -0.322 0.306 0.0230639565684303 0.00623163186771857 -3.13968869870443 4.32969155596029 Q71F56 MED13L Q71F56.S2083.p_MED13L Q71F56_S2083s _1_1_2083_2083 Q71F56 Q71F56 Mediator of RNA polymerase II transcription subunit 13-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29666.29666.5 12.33 12.33 8.257 4 1 1 0 712.0011 3476.0132 S2083s TMT10 2081 (R) LLsREAPEELKQQPLALGYFVSTAK (A) LLS(0.99)REAPEELKQQPLALGY(0.0)FVS(0.0)T(0.0)AK K:TMT10,s:Phosphorylated S MED13L 245507 4 18 415.1 321.44 HUMAN 1 -16.3707 22.054 SQGKGSISEDELITA-p Q16799;S352-p SQGKGSISEDELITA 0.169558691409461 0.155238594833423 -0.361666666666667 0.182 15.3745863729452 10.6392953627526 -0.361666666666667 0.182 0.0290095747605978 0.0863118576293034 -2.94900487099584 2.09212273958315 Q16799 RTN1 Q16799.S352.p_RTN1 Q16799_S352s _1_1_352_352 Q16799 Q16799|Q2NKQ5 Reticulon-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26935.26935.3 13.88 12.17 1.547 3 1 1 0 638.6803 1834.0574 S352s TMT10 349 (K) GSIsEDELITAIK (E) GS(0.0)IS(0.99)EDELIT(0.0)AIK K:TMT10,s:Phosphorylated S RTN1 83901.3 2 2 5293.1 20.93 HUMAN 1 -15.3746 10.6393 SQGLSGCSPRDSGCY-p O94885;S721-p SQGLSGCSPRDSGCY 0.388754166810574 0.516712898035169 -0.121333333333333 0.100333333333333 7.59156200367116 3.85045559173915 -0.121333333333333 0.100333333333333 0.174118051970044 0.412054290738271 -1.56421620790812 0.888287565433874 O94885 SASH1 O94885.S721.p_SASH1 O94885_S721s _1_1_721_721 O94885 O94885|A0A087WW74 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19294.19294.2 14.98 8.41 2.096 3 1 1 0 899.4414 1717.9104 S721s TMT10 710 (K) LLVDSQGLSGCsPR (D) LLVDS(0.0)QGLS(0.0)GCS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S SASH1 137734.8 7 13 295.1 379.69 HUMAN 1 -7.5916 3.8505 SQGNRTPSPNSNEQQ-p Q9H4E7;S597-p SQGNRTPSPNSNEQQ 0.663377338382 0.775102160739813 0.062 0.0393333333333333 3.33487406623789 1.52980025653076 0.062 0.0393333333333334 0.463994244376791 0.703104656774967 0.787645632368431 0.401914652995275 Q9H4E7 DEF6 Q9H4E7.S597.p_DEF6 Q9H4E7_S597s _1_1_597_597 Q9H4E7 Q9H4E7 Differentially expressed in FDCP 6 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8517.8517.3 13.45 8.92 1.321 4 1 1 0 851.7463 2473.2584 S597s TMT10 588 (R) WGSQGNRTPsPNSNEQQK (S) WGS(0.0)QGNRT(0.0)PS(0.99)PNS(0.0)NEQQK K:TMT10,s:Phosphorylated S DEF6 74479.6 10 2 4302.1 34.02 HUMAN 1 3.3349 1.5298 SQGQRPVTPIPDVQS-p Q8TDI0;T1217-p SQGQRPVTPIPDVQS 0.914824919707995 0.0226193350033276 -0.0306666666666667 0.394666666666667 0.757479973216421 22.4728735342654 -0.0306666666666667 0.394666666666667 0.839947230915317 0.00565864757494962 -0.211887300392472 4.42609853081937 Q8TDI0 CHD5 Q8TDI0.T1217.p_CHD5 Q8TDI0_T1217t _1_1_1217_1217 Q8TDI0 Q8TDI0 Chromodomain-helicase-DNA-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28427.28427.4 16.71 11.4 2.522 5 1 1 0 1080.8 4240.1873 T1217t TMT10 1195 (K) FGTEELFKDDVEGMMSQGQRPVtPIPDVQSSK (G) FGT(0.0)EELFKDDVEGMMS(0.0)QGQRPVT(0.99)PIPDVQS(0.0)S(0.0)K K:TMT10,t:Phosphorylated T CHD5 224643 1 4 1884.1 109.13 HUMAN 1 -0.7575 22.4729 SQGSQGPSPQGARRA-p Q96MG7;S64-p SQGSQGPSPQGARRA 0.942896336607154 0.589903174540975 -0.0166666666666667 0.0923333333333334 0.502237346562505 3.0998620648356 -0.0166666666666667 0.0923333333333334 0.890791912343215 0.489794375355832 -0.143893143736932 0.740517501558253 Q96MG7 NDNL2 Q96MG7.S64.p_NDNL2 Q96MG7_S64s _1_1_64_64 Q96MG7 Q96MG7 Non-structural maintenance of chromosomes element 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4383.4383.2 17.49 13.16 3.446 3 1 1 0 917.4274 1753.8779 S64s TMT10 53 (R) GPGGSQGSQGPsPQGAR (R) GPGGS(0.0)QGS(0.0)QGPS(0.99)PQGAR s:Phosphorylated S NSMCE3 34364.4 7 1 2978.1 64.19 HUMAN 1 -0.5022 3.0999 SQIDVALSQDSTYQG-p Q92900;S1107-p SQIDVALSQDSTYQG 0.516890443913966 0.703659667612759 -0.127666666666667 -0.0576666666666666 5.29246667984047 2.09811575116997 -0.127666666666667 -0.0576666666666666 0.295633286933982 0.61686257847862 -1.15739425568467 -0.53035977943586 Q92900 UPF1 Q92900.S1107.p_UPF1 Q92900_S1107s _1_1_1107_1107 Q92900 Q92900|Q92900-2 Regulator of nonsense transcripts 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15907.15907.2 18.52 18.52 1.576 5 1 1 0 1103.5134 2126.0563 S1107s TMT10 1100 (K) SQIDVALsQDSTYQGER (A) S(0.0)QIDVALS(0.99)QDS(0.0)T(0.0)Y(0.0)QGER s:Phosphorylated S UPF1 125655.3 3 1 4383.1 32.23 HUMAN 1 -5.2925 -2.0981 SQIGPPLTDSRPLGS-p Q96QT6;T655-p SQIGPPLTDSRPLGS 0.633706957274332 0.151285111448122 0.0766666666666667 -0.145666666666667 3.68855128211325 10.7859254163106 0.0766666666666667 -0.145666666666667 0.427705536208355 0.0834463717646766 0.857107174277752 -2.11771270216859 Q96QT6 PHF12 Q96QT6.T655.p_PHF12 Q96QT6_T655t _1_1_655_655 Q96QT6 Q96QT6|Q96QT6-3|Q96QT6-5|C9J9G2|Q96QT6-2|Q96QT6-4 PHD finger protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17879.17879.4 14.41 14.41 1.243 6 1 1 0 700.3653 2718.4736 T655t TMT10 645 (K) TVQSQIGPPLtDSRPLGSPPNATR (V) T(0.0)VQS(0.0)QIGPPLT(0.99)DS(0.0)RPLGS(0.0)PPNAT(0.0)R t:Phosphorylated T PHF12 111750.5 2 7 626.1 258.17 HUMAN 1 3.6886 -10.7859 SQILRTPSLGREGAH-p Q9P2Q2;S908-p SQILRTPSLGREGAH 0.391198751974399 0.968675141143769 -0.136 -0.00966666666666664 7.52184916758014 0.195953433319653 -0.136 -0.00966666666666661 0.176935543012722 0.955882821163234 -1.55208578821346 -0.0579255587913873 Q9P2Q2 FRMD4A Q9P2Q2.S908.p_FRMD4A Q9P2Q2_S908s _1_1_908_908 Q9P2Q2 Q9P2Q2 FERM domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.6034.6034.3 7.07 7.07 7.07 2 1 1 0 602.6503 1725.9648 S908s TMT10 906 (R) TPsLGREGAHDK (G) T(0.0)PS(0.99)LGREGAHDK K:TMT10,s:Phosphorylated S FRMD4A 116026.8 1 13 787.1 225.06 HUMAN 1 -7.5218 -0.196 SQITPPGTPSSALSS-p Q8N0Z3;T239-p SQITPPGTPSSALSS 0.382833983829495 0.878974981770907 0.179333333333333 0.0226666666666667 7.71941268346587 0.786441236651102 0.179333333333333 0.0226666666666667 0.169066955325501 0.83436461258874 1.58644511796945 0.219395784047523 Q8N0Z3 SPICE1 Q8N0Z3.T239.p_SPICE1 Q8N0Z3_T235tT239t_2_2_235_239 Q8N0Z3 Q8N0Z3 Spindle and centriole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18548.18572.3 13.13 13.13 2 8 2 2 0 901.4259 2542.331 T235t T239t TMT10 228 (K) IATQSQItPPGtPSSALSSGEQR (A) IAT(0.0)QS(0.0)QIT(0.99)PPGT(0.99)PS(0.0)S(0.0)ALS(0.0)S(0.0)GEQR t:Phosphorylated T SPICE1 96605.1 2 14 556.1 273.19 HUMAN 1 7.7194 0.7864 SQITSQVTGQIGWRR-p Q96CW1-2;T154-p SQITSQVTGQIGWRR 0.103816750749035 0.0730937661413829 0.372333333333333 -0.236 20.7795256719794 15.0893070796791 0.372333333333333 -0.236 0.00835694286158242 0.0309791353437092 4.04827824745385 -2.8933158187391 Q96CW1 AP2M1 Q96CW1.2.T154.p_AP2M1 Q96CW1-2_T154t _1_1_154_154 Q96CW1-2 Q96CW1-2 Isoform 2 of AP-2 complex subunit mu HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16286.16286.3 16.69 16.69 2.348 6 1 1 0 977.1637 2849.5158 T154t TMT10 140 (K) SQTKEEQSQITSQVtGQIGWR (R) S(0.0)QT(0.0)KEEQS(0.0)QIT(0.0)S(0.0)QVT(0.99)GQIGWR K:TMT10,t:Phosphorylated T AP2M1 49730.8 6 2 2614.1 76.71 HUMAN 1 20.7795 -15.0893 SQKEQGLSDNILSPV-p Q5T2W1;S115-p SQKEQGLSDNILSPV 0.256943343843048 0.545197337191569 0.191333333333333 0.0616666666666667 11.2098063129385 3.54340215371435 0.191333333333333 0.0616666666666667 0.0756866649078286 0.442241795533566 2.19290714706274 0.828649268858397 Q5T2W1 PDZK1 Q5T2W1.S115.p_PDZK1 Q5T2W1_S115s _1_1_115_115 Q5T2W1 Q5T2W1|Q5T2W1-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30201.30201.3 21.39 21.39 5.941 4 1 1 0 979.4799 2856.4512 S115s TMT10 111 (K) EQGLsDNILSPVMNGGVQTWTQPR (L) EQGLS(0.99)DNILS(0.0)PVMNGGVQT(0.0)WT(0.0)QPR s:Phosphorylated S PDZK1 57413.6 3 3 1301.1 156.33 HUMAN 1 11.2098 3.5434 SQKILQRSQAQQPQK-p Q3MHD2-2;S185-p SQKILQRSQAQQPQK 0.259555107566137 0.0818421150515285 -0.245666666666667 -0.205333333333333 11.1122293144061 14.4091573961362 -0.245666666666667 -0.205333333333333 0.0774064354163824 0.0362313286429634 -2.17578271344175 -2.76663629614698 Q3MHD2 LSM12 Q3MHD2.2.S185.p_LSM12 Q3MHD2-2_S185s _1_1_185_185 Q3MHD2-2 Q3MHD2-2 Isoform 2 of Protein LSM12 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4123.4123.2 10.19 10.19 99 1 1 1 0 612.3036 1143.632 S185s Hydrogen 185 (R) sQAQQPQK (E) S(1.0)QAQQPQK K:TMT10-Lys-Only,s:Phosphorylated S LSM12 22283.9 2 3 3242.1 56.13 HUMAN 1 -11.1122 -14.4092 SQKKRTLSPEFNERF-p Q9BSJ8-2;S1044-p SQKKRTLSPEFNERF 0.271709690894866 0.997566213620728 0.174666666666667 0.000333333333333352 10.7251757411682 0.0148909810199767 0.174666666666667 0.000333333333333354 0.0846218325128801 0.996577096445006 2.10802915026439 0.00449129268855056 Q9BSJ8 ESYT1 Q9BSJ8.2.S1044.p_ESYT1 Q9BSJ8-2_S1044s _1_1_1044_1044 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29484.29484.3 19.91 13.61 2.265 2 1 1 0 972.4657 2835.4151 S1044s TMT10 1042 (R) TLsPEFNERFEWELPLDEAQR (R) T(0.0)LS(0.99)PEFNERFEWELPLDEAQR s:Phosphorylated S ESYT1 124514 13 11 400.1 328.2 HUMAN 1 10.7252 0.0149 SQKLLEASLEEQGLA-p Q9NW68-7;S330-p SQKLLEASLEEQGLA 0.0571662469334365 0.0028998898692722 0.462333333333333 0.687666666666667 27.157017127727 38.341307009535 0.462333333333334 0.687666666666667 0.00192441302301723 0.000146510685059611 5.61165719018672 9.40976330568797 Q9NW68 BSDC1 Q9NW68.7.S330.p_BSDC1 Q9NW68-7_S330s _1_1_330_330 Q9NW68-7 Q9NW68-3|Q9NW68-7 Isoform 7 of BSD domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26686.26686.4 22.83 22.83 8.88 4 1 1 0 828.6879 3231.7513 S330s TMT10 326 (K) LLEAsLEEQGLAVDVGETGPSPPIHSK (P) LLEAS(0.99)LEEQGLAVDVGET(0.0)GPS(0.0)PPIHS(0.0)K K:TMT10,s:Phosphorylated S BSDC1 49387.9 1 4 1426.1 143.74 HUMAN 1 27.157 38.3413 SQKQRRYSDHAGPAI-p J3KNR0;S442-p SQKQRRYSDHAGPAI 0.0767901617046939 0.0473955550857292 -0.524333333333333 -0.329666666666667 23.8988650172482 17.7186525969963 -0.524333333333334 -0.329666666666667 0.00407486756249262 0.0169096547401039 -4.77019098465219 -3.40281710168484 J3KNR0 NotFound J3KNR0.S442.p_NotFound J3KNR0_S442s _1_1_442_442 J3KNR0 J3KNR0|P27448-7|A0A0A0MT23|P27448-8|A0A0A0MST9 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20902.20902.3 19.86 19.86 6.273 4 1 1 0 770.7357 2230.2272 S442s TMT10 441 (R) YsDHAGPAIPSVVAYPK (R) Y(0.0)S(0.99)DHAGPAIPS(0.0)VVAY(0.0)PK K:TMT10,s:Phosphorylated S MARK3 87513.5 8 33 200.3 451.67 HUMAN 1 -23.8989 -17.7187 SQKRAISTPETPLTK-p Q14181;T127-p SQKRAISTPETPLTK 0.341244205876587 0.0140331145277623 0.186666666666667 -0.652 8.67948696544664 25.7016341555244 0.186666666666667 -0.652 0.135534951110687 0.00269052222853223 1.75288137711591 -5.21695149852683 Q14181 POLA2 Q14181.T127.p_POLA2 Q14181_T127tT130t_2_2_127_130 Q14181 Q14181 DNA polymerase alpha subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16924.16924.2 7.48 7.48 1.173 4 2 2 0 888.4504 1615.9671 T127t T130t TMT10 124 (R) AIStPEtPLTK (R) AIS(0.0)T(0.99)PET(0.99)PLT(0.0)K K:TMT10,t:Phosphorylated T POLA2 66802.4 3 6 2066.1 99.64 HUMAN 1 8.6795 -25.7016 SQKRDVSSPDENNGQ-p O43829;S132-p SQKRDVSSPDENNGQ 0.195133648890982 0.0264638389566224 0.384333333333333 0.289333333333333 13.8408139379246 21.4103332188492 0.384333333333333 0.289333333333333 0.0412970097478168 0.00722714350149947 2.66373793531888 4.1841019223884 O43829 ZBTB14 O43829.S132.p_ZBTB14 O43829_S132s_1_1_132_132 O43829 O43829 Zinc finger and BTB domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7363.7363.2 8 8 0 3 1 1 0 958.4407 1834.9183 S132s N137n TMT10 129 (R) DVSsPDENnGQSK (S) DVS(0.0)S(0.99)PDEN(0.50)N(0.50)GQS(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated ZBTB14 51925.3 2 1 1836.1 111.99 HUMAN 1 13.8408 21.4103 SQKVSQPSAEVWNEN-p Q8TC56;S421-p SQKVSQPSAEVWNEN 0.138406999744561 0.00800154933185789 -0.257666666666667 -0.438333333333333 17.5890648181047 29.8882188517665 -0.257666666666667 -0.438333333333333 0.0174218198330267 0.00102607265754308 -3.37957218368754 -6.3881099501894 Q8TC56 FAM71B Q8TC56.S421.p_FAM71B Q8TC56_S421s_1_1_421_421 Q8TC56 Q8TC56 Protein FAM71B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11413.11413.3 7.87 0.34 7.866 3 1 1 0 924.7878 2690.4353 S421s N426n N428n TMT10 412 (R) DGSQKVSQPsAEVWnEnK (E) DGS(0.0)QKVS(0.0)QPS(0.99)AEVWN(1.0)EN(1.0)K K:TMT10,s:Phosphorylated S,n:Deamidated FAM71B 65211.1 1 1 7073.1 7.87 HUMAN 1 -17.5891 -29.8882 SQLEEHLSQLQDNPP-p Q14980;S395-p SQLEEHLSQLQDNPP 0.463415485914398 0.00221674111277029 -0.142666666666667 0.941333333333333 6.16117498749633 41.1804067410325 -0.142666666666667 0.941333333333333 0.242037412382184 7.62007640412942e-05 -1.31322517832751 10.6752473984886 Q14980 NUMA1 Q14980.S395.p_NUMA1 Q14980_S395s _1_1_395_395 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-3|Q14980-4|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21503.21503.4 18.52 18.52 6.131 2 1 1 0 693.6059 2691.4354 S395s TMT10 387 (K) LSQLEEHLsQLQDNPPQEK (G) LS(0.0)QLEEHLS(0.99)QLQDNPPQEK K:TMT10,s:Phosphorylated S NUMA1 239339.3 5 5 31.1 900.97 HUMAN 1 -6.1612 41.1804 SQLGRQASFQERSSS-p Q9Y3R0-2;S938-p SQLGRQASFQERSSS 0.177944376974679 0.183160356003641 -0.254333333333333 -0.179666666666667 14.845923713977 9.69795360703525 -0.254333333333333 -0.179666666666667 0.0327648080939145 0.107202432345716 -2.84960367892429 -1.92852564179136 Q9Y3R0 GRIP1 Q9Y3R0.2.S938.p_GRIP1 Q9Y3R0-2_S938s _1_1_938_938 Q9Y3R0-2 Q9Y3R0|Q9Y3R0-2|Q9Y3R0-3 Isoform 2 of Glutamate receptor-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5879.5879.2 8.38 1.93 99 1 1 1 0 587.7762 1094.5792 S938s TMT10 936 (R) QAsFQER (S) QAS(1.0)FQER s:Phosphorylated S GRIP1 121491.7 1 6 1840.1 111.69 HUMAN 1 -14.8459 -9.698 SQLKEQISDIDDAVR-p P53999;S118-p SQLKEQISDIDDAVR 0.757811548618003 0.0527915481468727 0.057 0.294333333333333 2.30666308235866 17.0407357877746 0.057 0.294333333333333 0.58794092559848 0.019766347275268 0.575692499074444 3.26816460453576 P53999 SUB1 P53999.S118.p_SUB1 P53999_S118s _1_1_118_118 P53999 P53999 Activated RNA polymerase II transcriptional coactivator p15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16703.16703.2 15.95 13.96 99 1 1 1 0 785.3726 1489.7696 S118s TMT10 115 (K) EQIsDIDDAVR (K) EQIS(1.0)DIDDAVR s:Phosphorylated S SUB1 14395.1 2 6 2095.1 97.85 HUMAN 1 2.3067 17.0407 SQLSFRRSPTKSSLD-p Q96PK6;S627-p SQLSFRRSPTKSSLD 0.794385697846618 0.881728767375389 0.0716666666666667 -0.039 1.92951554536766 0.767426184353275 0.0716666666666667 -0.0389999999999999 0.641281107375676 0.838025785064678 0.493135549058509 -0.214456701506303 Q96PK6 RBM14 Q96PK6.S627.p_RBM14 Q96PK6_S627s _1_1_627_627 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12541.12541.4 14.56 10.39 1.707 5 1 1 0 544.2999 2094.2072 S627s TMT10 617 (R) LSESQLSFRRsPTK (S) LS(0.0)ES(0.0)QLS(0.0)FRRS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S RBM14 69661.6 15 17 151.1 510.8 HUMAN 1 1.9295 -0.7674 SQLSLDKSPTEKSTQ-p Q86W56;S137-p SQLSLDKSPTEKSTQ 0.103158959778694 0.00957419370815283 -0.458333333333333 -0.457333333333333 20.8295960299819 28.4708693944019 -0.458333333333333 -0.457333333333333 0.00826114789164036 0.00142204408607922 -4.05929610716744 -5.9712050968941 Q86W56 BPHL Q86W56.S137.p_BPHL Q86W56_S137s _1_1_137_137 Q86W56 Q86W56|Q86W56-2|Q86W56-3 Poly(ADP-ribose) glycohydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22519.22519.4 13.87 13.87 1.619 5 1 1 0 1015.5359 3979.1583 S137s TMT10 116 (K) DNFYQHNVEKLENVSQLSLDKsPTEK (S) DNFY(0.0)QHNVEKLENVS(0.0)QLS(0.0)LDKS(0.99)PT(0.0)EK K:TMT10,s:Phosphorylated S PARG 112534.8 4 3 855.1 211.13 HUMAN 1 -20.8296 -28.4709 SQNDVDMSWIPQETL-p P43307;S254-p SQNDVDMSWIPQETL 0.427414948238645 0.701755186172825 -0.12 -0.055 6.79935756111778 2.11334199585842 -0.12 -0.055 0.208960521706372 0.614703662063405 -1.42584405782804 -0.533695383606405 P43307 SSR1 P43307.S254.p_SSR1 P43307_S254s_1_1_254_254 P43307 P43307|P43307-2|C9JBX5 Translocon-associated protein subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24745.24745.3 11.36 11.36 1.182 6 1 1 0 1310.642 3833.9202 M253m S254s TMT10 241 (K) VEMGTSSQNDVDmsWIPQETLNQINKASPR (R) VEM(0.0)GT(0.0)S(0.0)S(0.0)QNDVDM(0.99)S(0.99)WIPQET(0.0)LNQINKAS(0.0)PR K:TMT10,m:Oxidized methionine,s:Phosphorylated S SSR1 32234.8 109 1 2417.1 84.33 HUMAN 1 -6.7994 -2.1133 SQNLRRWSLEALNRD-p Q5HYI8;S110-p SQNLRRWSLEALNRD 0.0502987961976786 0.00868266582117059 -0.483333333333333 -0.483333333333333 28.6500355424242 29.2383195990824 -0.483333333333334 -0.483333333333333 0.00136457196896046 0.00119170302044282 -6.03167943565975 -6.19419514417153 Q5HYI8 RABL3 Q5HYI8.S110.p_RABL3 Q5HYI8_S110s _1_1_110_110 Q5HYI8 Q5HYI8|C9JXM3|F8WDC7|F8WF50 Rab-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16431.16431.3 7.97 7.97 99 1 1 1 0 485.2554 1373.7851 S110s TMT10 108 (R) RWsLEALNR (D) RWS(1.0)LEALNR s:Phosphorylated S RABL3 26593.5 1 1 5717.1 16.9 HUMAN 1 -28.65 -29.2383 SQNLSPLSGFSRSRQ-p Q9P2M7;S255-p SQNLSPLSGFSRSRQ 0.414722828335074 0.733646832122978 0.126 0.0493333333333334 7.05175764907377 1.85464451748101 0.126 0.0493333333333334 0.197162463121181 0.652432442283737 1.47007010868798 0.47631200350119 Q9P2M7 CGN Q9P2M7.S255.p_CGN Q9P2M7_S252sS255s_2_2_252_255 Q9P2M7 Q9P2M7|Q9P2M7-2 Cingulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20004.20004.3 10.82 10.82 2.839 4 2 2 0 702.6586 1946.0293 S252s S255s TMT10 244 (K) QPAQSQNLsPLsGFSR (S) QPAQS(0.0)QNLS(0.99)PLS(0.99)GFS(0.0)R s:Phosphorylated S CGN 136611.7 1 22 239.1 416.31 HUMAN 1 7.0518 1.8546 SQNMIFPSPGSCAVL-p O75592;S3148-p SQNMIFPSPGSCAVL 0.385914038502364 0.877752670779461 0.117333333333333 0.016 7.65555247328213 0.796001567040358 0.117333333333333 0.016 0.171571343745875 0.832529906352104 1.57534475046613 0.221873240016257 O75592 MYCBP2 O75592.S3148.p_MYCBP2 O75592_S3148s _1_1_3148_3148 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25870.25870.3 16.05 16.05 4.716 3 1 1 0 806.0789 2336.2507 S3148s TMT10 3139 (K) AASQNMIFPsPGSCAVLK (K) AAS(0.0)QNMIFPS(0.99)PGS(0.0)CAVLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MYCBP2 518176.7 2 19 252.1 405.77 HUMAN 1 7.6556 0.796 SQNPEGLSADKFEVS-p P38398;S1473-p SQNPEGLSADKFEVS 0.303027901035428 0.00211428234964463 -0.162333333333333 -0.795 9.71755889414338 41.5886632947554 -0.162333333333333 -0.795 0.106719580785475 6.93639266838676e-05 -1.93267986471149 -10.8695212484485 P38398 BRCA1 P38398.S1473.p_BRCA1 P38398_S1473s _1_1_1473_1473 P38398 P38398-7|P38398-4|P38398-8|P38398-3|P38398-5|P38398-6 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20702.20702.4 21.77 21.77 3.41 10 1 1 0 932.7099 3647.8531 S1473s TMT10 1460 (K) SSEYPISQNPEGLsADKFEVSADSSTSK (N) S(0.0)S(0.0)EY(0.0)PIS(0.0)QNPEGLS(0.99)ADKFEVS(0.0)ADS(0.0)S(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S BRCA1 210227.6 1 18 106.1 588.91 HUMAN 1 -9.7176 -41.5887 SQNRKKLSELLRYYT-p P07900;S460-p SQNRKKLSELLRYYT 0.14868246520739 0.161226219307988 -0.349 0.161 16.70608518472 10.4235545930371 -0.349 0.161 0.0213496854836177 0.0907077805495316 -3.20496778441093 2.05453133055017 P07900 HSP90AA1 P07900.S460.p_HSP90AA1 P07900_S460s _1_1_460_460 P07900 P07900-2 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19650.19650.3 8.65 1.77 99 1 1 1 0 466.2822 1316.8666 S460s TMT10 458 (K) KLsELLR (Y) KLS(1.0)ELLR K:TMT10,s:Phosphorylated S HSP90AA1 85057.6 1 14 43.1 810.87 HUMAN 1 -16.7061 10.4236 SQNSQESTADESEDD-p Q9BXW9;T1408-p SQNSQESTADESEDD 0.248650960362662 0.992893895799708 -0.416666666666667 -0.00166666666666663 11.5379733827452 0.0440042383215225 -0.416666666666667 -0.00166666666666666 0.0701782706022327 0.989918809008848 -2.25064162877364 -0.0132282322254316 Q9BXW9 FANCD2 Q9BXW9.T1408.p_FANCD2 Q9BXW9_S1407sT1408tS1412s_3_3_1407_1412 Q9BXW9 Q9BXW9-1 Fanconi anemia group D2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9667.9667.3 12.8 12.8 3.505 8 3 3 0 1020.3893 2819.2525 S1407s T1408t S1412s TMT10 1401 (K) SQNSQEstADEsEDDMSSQASK (S) S(0.0)QNS(0.0)QES(0.99)T(0.99)ADES(0.99)EDDMS(0.0)S(0.0)QAS(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T FANCD2 165894.1 1 12 960.1 194.41 HUMAN 1 -11.538 -0.044 SQNSVNLSPSSHANN-p Q9H6K1;S272-p SQNSVNLSPSSHANN 0.819468419267237 0.361343631626388 -0.0433333333333333 -0.126 1.66637312960641 5.864796064105 -0.0433333333333334 -0.126 0.681338118740383 0.259131610145488 -0.433581321224967 -1.26014697057734 Q9H6K1 C6orf106 Q9H6K1.S272.p_C6orf106 Q9H6K1_S272s _1_1_272_272 Q9H6K1 Q9H6K1|Q9H6K1-2|Q5TH58 Uncharacterized protein C6orf106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19910.19910.3 17.19 17.19 1.438 9 1 1 0 1028.864 3004.6104 S272s TMT10 264 (R) LSQNSVNLsPSSHANNLSVVTYSK (G) LS(0.0)QNS(0.0)VNLS(0.99)PS(0.0)S(0.0)HANNLS(0.0)VVT(0.0)Y(0.0)S(0.0)K K:TMT10,s:Phosphorylated S C6orf106 33156.3 7 3 2462.1 82.34 HUMAN 1 -1.6664 -5.8648 SQNVWFSTVNGERPE-p Q8TDW7;T2742-p SQNVWFSTVNGERPE 0.910912795817508 0.113248129466218 0.0173333333333333 0.178333333333333 0.794632884792839 12.474872242223 0.0173333333333333 0.178333333333333 0.832792320110955 0.056560439540725 0.221540058779107 2.41559629848386 Q8TDW7 FAT3 Q8TDW7.T2742.p_FAT3 Q8TDW7_S2735sS2741sT2742t_3_3_2735_2742 Q8TDW7 Q8TDW7|Q8TDW7-3|E9PQ73 Protocadherin Fat 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.38089.38089.4 7.53 5.19 1.165 5 3 3 0 1208.3486 4589.4971 S2735s S2741s T2742t N2744n TMT10 2732 (R) ILPsQNVWFstVnGERPENNKGGIFVIEQETGTIK (L) ILPS(0.99)QN(0.0)VWFS(0.99)T(0.99)VN(0.99)GERPEN(0.0)N(0.0)KGGIFVIEQET(0.0)GT(0.0)IK K:TMT10,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated FAT3 508994.1 2 4 4589.1 29.16 HUMAN 1 0.7946 12.4749 SQPDLVDTPTSSKPQ-p P46013;T1747-p SQPDLVDTPTSSKPQ 0.246737483473709 0.00973756067232691 0.183666666666667 -0.630333333333333 11.6267448542585 28.3202012288266 0.183666666666667 -0.630333333333333 0.0687583608032386 0.0014722442849292 2.26629907991407 -5.92817029596332 P46013 MKI67 P46013.T1747.p_MKI67 P46013_T1747t _1_1_1747_1747 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13127.13127.3 20.91 20.91 2 5 1 1 0 888.4823 2583.4597 T1747t TMT10 1739 (R) ASQPDLVDtPTSSKPQPK (R) AS(0.0)QPDLVDT(0.99)PT(0.0)S(0.0)S(0.0)KPQPK K:TMT10,t:Phosphorylated T MKI67 360912.4 3 55 5.1 1918.46 HUMAN 1 11.6267 -28.3202 SQPDPVDTPTSSKPQ-p P46013;T1503-p SQPDPVDTPTSSKPQ 0.570669686051518 0.0040885830972471 0.0766666666666667 -0.871666666666667 4.48313852810395 35.1703831603725 0.0766666666666667 -0.871666666666667 0.356193628943608 0.000304061675258253 1.00842675184606 -8.15714960499453 P46013 MKI67 P46013.T1503.p_MKI67 P46013_T1503t _1_1_1503_1503 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9156.9156.4 19.41 19.41 2.701 6 1 1 0 642.3397 2486.3705 T1503t TMT10 1496 (R) SQPDPVDtPTSSKPQSK (R) S(0.0)QPDPVDT(0.99)PT(0.0)S(0.0)S(0.0)KPQS(0.0)K K:TMT10,t:Phosphorylated T MKI67 360912.4 2 46 5.1 1918.46 HUMAN 1 4.4831 -35.1704 SQPEAGGSHHKVSVS-p D6W592;S68-p SQPEAGGSHHKVSVS 0.178115895866256 0.0202362400418762 -0.212333333333333 -0.463 14.8039662635284 23.1956994128834 -0.212333333333333 -0.463 0.033082884876049 0.00479104288976793 -2.84176510507247 -4.5956397901271 D6W592 NotFound D6W592.S68.p_NotFound D6W592_S68s _1_1_68_68 D6W592 Q8WVV9|D6W592|Q8WVV9-4|C9IYN3|Q8WVV9-5|B7WPG3|Q8WVV9-2|Q8WVV9-3 Heterogeneous nuclear ribonucleoprotein L-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5402.5402.3 15.09 15.09 5.332 3 1 1 0 636.3115 1826.955 S68s TMT10 59 (R) SFSQPEAGGsHHK (V) S(0.0)FS(0.0)QPEAGGS(0.99)HHK K:TMT10,s:Phosphorylated S HNRPLL 60954 2 3 1148.1 172.52 HUMAN 1 -14.804 -23.1957 SQPPGEDSDTDVDDD-p Q14676;S299-p SQPPGEDSDTDVDDD 0.950174393059231 0.0635928265391406 -0.021 0.439333333333333 0.439842074330975 15.9339160752495 -0.021 0.439333333333333 0.903682334384457 0.0255040054472867 -0.126793283862084 3.05336527533029 Q14676 MDC1 Q14676.S299.p_MDC1 Q14676_S299s _1_1_299_299 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8654.8954.5 18.86 18.86 1.355 4 1 1 0 697.3195 3402.5996 S299s TMT10 292 (R) SQPPGEDsDTDVDDDSRPPGRPAEVHLER (A) S(0.0)QPPGEDS(0.99)DT(0.0)DVDDDS(0.0)RPPGRPAEVHLER s:Phosphorylated S MDC1 227803.2 3 9 6.1 1662.62 HUMAN 1 -0.4398 15.9339 SQPPQQRSAPDISFT-p Q9Y4J8-15;S398-p SQPPQQRSAPDISFT 0.565856073226583 0.26993716841888 0.078 0.196333333333333 4.55510190102643 7.48824721215155 0.078 0.196333333333333 0.350340067973466 0.178309827057348 1.02185819573455 1.54577888978185 Q9Y4J8 DTNA Q9Y4J8.15.S398.p_DTNA Q9Y4J8-15_S398s _1_1_398_398 Q9Y4J8-15 Q9Y4J8|Q9Y4J8-15|Q9Y4J8-14|Q9Y4J8-2|Q9Y4J8-13|Q9Y4J8-3|Q9Y4J8-4|Q9Y4J8-5|Q9Y4J8-16|Q9Y4J8-11 Isoform 15 of Dystrobrevin alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21549.21549.2 14.98 14.98 5.24 3 1 1 0 844.4117 1607.8478 S398s Hydrogen 398 (R) sAPDISFTIDANK (Q) S(0.99)APDIS(0.0)FT(0.0)IDANK K:TMT10-Lys-Only,s:Phosphorylated S DTNA 83008.6 6 14 792.1 224.62 HUMAN 1 4.5551 7.4882 SQPRGQQSAEEENFK-p Q15014;S15-p SQPRGQQSAEEENFK 0.494097676491503 0.0201264196371064 -0.126 -0.392 5.6387714845654 23.2388070407412 -0.126 -0.392 0.272974985468446 0.00474372272220073 -1.21993564552257 -4.60588127033788 Q15014 MORF4L2 Q15014.S15.p_MORF4L2 Q15014_S15s _1_1_15_15 Q15014 Q15014 Mortality factor 4-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8231.8231.4 14.98 14.98 14.984 2 1 1 0 629.8331 2436.345 S15s TMT10 12 (R) GQQsAEEENFKKPTR (S) GQQS(0.99)AEEENFKKPT(0.0)R K:TMT10,s:Phosphorylated S MORF4L2 32364.3 1 1 5966.1 14.98 HUMAN 1 -5.6388 -23.2388 SQPRRTKSFLNYYAD-p Q92870-4;S160-p SQPRRTKSFLNYYAD 0.0775649771385732 0.0557123144851956 -0.415333333333333 -0.314666666666667 23.7326880892791 16.7090226753475 -0.415333333333333 -0.314666666666667 0.00423380831068517 0.0213352498186678 -4.7298016923702 -3.20315324568434 Q92870 APBB2 Q92870.4.S160.p_APBB2 Q92870-4_S160s _1_1_160_160 Q92870-4 Q92870-4|G5E9Y1|Q92870-2 Isoform 4 of Amyloid-beta A4 precursor protein-binding family B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28805.28805.2 17.27 17.27 8.914 5 1 1 0 979.9589 1878.9435 S160s TMT10 160 (K) sFLNYYADLETSAR (E) S(0.99)FLNY(0.0)Y(0.0)ADLET(0.0)S(0.0)AR s:Phosphorylated S APBB2 84356.2 3 8 667.1 249.66 HUMAN 1 -23.7327 -16.709 SQPSLVGSKEEPPPA-p Q9H4A3-7;S174-p SQPSLVGSKEEPPPA 0.791634956034985 0.482779498170064 -0.0623333333333333 -0.0876666666666666 1.95920570485096 4.22067372048646 -0.0623333333333333 -0.0876666666666666 0.636911997140313 0.378383881519698 -0.499748778631773 -0.958914413881701 Q9H4A3 WNK1 Q9H4A3.7.S174.p_WNK1 Q9H4A3-7_S174s _1_1_174_174 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2|F5GWT4 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10540.10540.4 14.59 14.59 3.968 3 1 1 0 671.86 2604.451 S174s TMT10 163 (K) DRPVSQPSLVGsKEEPPPAR (S) DRPVS(0.0)QPS(0.0)LVGS(0.99)KEEPPPAR K:TMT10,s:Phosphorylated S WNK1 301202.7 4 6 162.1 495.27 HUMAN 1 -1.9592 -4.2207 SQPSSCCSDPSKPGG-p Q13501;S291-p SQPSSCCSDPSKPGG 0.33341610353663 0.244588129654077 0.155333333333333 -0.148333333333333 8.90340707579194 8.05965658121622 0.155333333333333 -0.148333333333333 0.128723930569025 0.156327125357997 1.79164217552539 -1.64498238843093 Q13501 SQSTM1 Q13501.S291.p_SQSTM1 Q13501_S291s_1_1_291_291 Q13501 Q13501|E7EMC7|Q13501-2 Sequestosome-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11911.11911.4 19.83 19.83 2.283 9 1 1 0 949.1799 3697.7256 S291s M311m TMT10 282 (K) SSSQPSSCCsDPSKPGGNVEGATQSLAEQmR (K) S(0.0)S(0.0)S(0.0)QPS(0.0)S(0.0)CCS(0.99)DPS(0.0)KPGGNVEGAT(0.0)QS(0.0)LAEQM(1.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,m:Oxidized methionine SQSTM1 48485.1 3 12 541.1 276.49 HUMAN 1 8.9034 -8.0597 SQPTELNSEVLEQSQ-p A0A1B0GV68;S383-p SQPTELNSEVLEQSQ 0.192059131883792 0.0444000016027809 0.324 0.271666666666667 13.9855870203269 18.1093868747798 0.324 0.271666666666667 0.0399430568057254 0.0154547260978675 2.69027261880925 3.48156485689641 A0A1B0GV68 NotFound A0A1B0GV68.S383.p_NotFound A0A1B0GV68_S383s _1_1_383_383 A0A1B0GV68 A0A1B0GV68|Q9Y4F1-2|C9JME2 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22129.22129.4 24.28 24.28 2.877 11 1 1 0 1116.271 4382.1004 S383s TMT10 373 (R) SLASQPTELNsEVLEQSQQSTSLTFGEGAESPGGQSCRR (G) S(0.0)LAS(0.0)QPT(0.0)ELNS(0.99)EVLEQS(0.0)QQS(0.0)T(0.0)S(0.0)LT(0.0)FGEGAES(0.0)PGGQS(0.0)CRR C:Carbamidomethylation,s:Phosphorylated S FARP1 88555.5 3 6 147.1 514.5 HUMAN 1 13.9856 18.1094 SQQKDKQSYRDLKEV-p P22234-2;S237-p SQQKDKQSYRDLKEV 0.696083958415116 0.0851916144551899 -0.113666666666667 -0.273 2.95636554958916 14.1563019749415 -0.113666666666667 -0.273 0.506248145188889 0.0384034112022397 -0.711535630400519 -2.72000736864257 P22234 PAICS P22234.2.S237.p_PAICS P22234-2_S237s _1_1_237_237 P22234-2 P22234-2|D6RF62 Isoform 2 of Multifunctional protein ADE2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8400.8400.4 9.54 9.54 9.538 2 1 1 0 480.7691 1840.0896 S237s TMT10 234 (K) DKQsYRDLK (E) DKQS(0.99)Y(0.0)RDLK K:TMT10,s:Phosphorylated S PAICS 48699 1 4 991.1 191.33 HUMAN 1 -2.9564 -14.1563 SQQTPVGTPKDKRVS-p O75781;T145-p SQQTPVGTPKDKRVS 0.0901187281838346 0.475225848596511 -0.374333333333333 -0.124333333333333 22.237441023555 4.30880697703971 -0.374333333333333 -0.124333333333333 0.00597387179020163 0.370782563131524 -4.3764382207698 -0.975542238932278 O75781 PALM O75781.T145.p_PALM O75781_T145t _1_1_145_145 O75781 O75781|O75781-2 Paralemmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13423.13423.4 15.47 15.47 2.125 4 1 1 0 653.6089 2531.447 T145t TMT10 131 (R) KTEVVMNSQQTPVGtPK (D) KT(0.0)EVVMNS(0.0)QQT(0.0)PVGT(0.99)PK K:TMT10,t:Phosphorylated T PALM 42246.4 1 4 1689.1 120.82 HUMAN 1 -22.2374 -4.3088 SQQYRALTVPELTQQ-p P68371;T285-p SQQYRALTVPELTQQ 0.188778224113783 0.589583148277203 -0.215333333333333 0.079 14.185666670936 3.10291276035352 -0.215333333333333 0.079 0.0381446235248969 0.489450440793776 -2.7270713180841 0.74113255076447 P68371 TUBB4B P68371.T285.p_TUBB4B P68371_T285t _1_1_285_285 P68371 A0A0B4J269|Q13509|P68371|P04350 Tubulin beta-4B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31927.31927.3 12.07 11.49 4.365 2 1 1 0 744.0571 2150.1931 T285t TMT10 283 (R) ALtVPELTQQMFDAK (N) ALT(0.99)VPELT(0.0)QQMFDAK K:TMT10,t:Phosphorylated T TUBB4B 50286.6 1 24 333.2 357.15 HUMAN 1 -14.1857 3.1029 SQRFNAISSEDFDQE-p O15040;S448-p SQRFNAISSEDFDQE 0.125743941781331 0.161596634631732 -0.3 -0.168333333333333 18.7069430240204 10.4081303968866 -0.3 -0.168333333333333 0.0134680803156269 0.0910305067366568 -3.6067769693234 -2.0518463218676 O15040 TECPR2 O15040.S448.p_TECPR2 O15040_S448sS449s_2_2_448_449 O15040 O15040|O15040-2 Tectonin beta-propeller repeat-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30898.30898.5 14.46 14.46 99 2 2 2 0 606.1163 2866.6169 S448s S449s TMT10 444 (R) FNAIssEDFDQELVVKPIK (V) FNAIS(1.0)S(1.0)EDFDQELVVKPIK K:TMT10,s:Phosphorylated S TECPR2 155842.4 6 4 3837.1 41.96 HUMAN 1 -18.7069 -10.4081 SQRKRRKSVTPDPKE-p O75618-2;S182-p SQRKRRKSVTPDPKE 0.940570059351066 0.128558983349736 -0.0176666666666667 -0.157 0.523113852762498 11.7486225153404 -0.0176666666666667 -0.157 0.886520157055634 0.0668555934886302 -0.149570548146078 -2.2867120320259 O75618 DEDD O75618.2.S182.p_DEDD O75618-2_S182s _1_1_182_182 O75618-2 O75618-2|B1AQP5 Isoform 2 of Death effector domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9353.9353.2 9.01 2.1 1.116 2 1 1 0 641.3465 1201.7193 S182s TMT10 182 (K) sVTPDPK (E) S(0.99)VT(0.0)PDPK K:TMT10,s:Phosphorylated S DEDD 40874 3 1 4377.1 32.42 HUMAN 1 -0.5231 -11.7486 SQRLLRNSGGRSISV-p Q6ZU80;S99-p SQRLLRNSGGRSISV 0.574247698827796 0.00119154670629161 0.087 -1.55566666666667 4.43405589826209 48.2689999335512 0.087 -1.55566666666667 0.360242053987978 1.48970407805077e-05 0.999242443277393 -14.558094534038 Q6ZU80 CEP128 Q6ZU80.S99.p_CEP128 Q6ZU80_S99s _1_1_99_99 Q6ZU80 Q6ZU80|Q6ZU80-1|Q6ZU80-3 Centrosomal protein of 128 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6592.6592.3 10.57 3.23 99 1 1 1 0 394.55 1101.669 S99s TMT10 95 (R) LLRNsGGR (S) LLRNS(1.0)GGR s:Phosphorylated S CEP128 128640.5 1 3 1261.1 161 HUMAN 1 4.4341 -48.269 SQRQLARSCLDLNTI-p Q6ZN28;S191-p SQRQLARSCLDLNTI 0.582330070632346 0.730950450515237 0.0866666666666667 0.037 4.32343756323874 1.87612643735413 0.0866666666666667 0.037 0.369535566172869 0.649213222143917 0.978471784696049 0.481136562919076 Q6ZN28 MACC1 Q6ZN28.S191.p_MACC1 Q6ZN28_S191s _1_1_191_191 Q6ZN28 Q6ZN28 Metastasis-associated in colon cancer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29891.29891.3 21.37 21.37 2.517 6 1 1 0 1333.3457 3918.0618 S191s TMT10 187 (R) QLARsCLDLNTISQSPGWAQTQLAEVTIACK (V) QLARS(0.99)CLDLNT(0.0)IS(0.0)QS(0.0)PGWAQT(0.0)QLAEVT(0.0)IACK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MACC1 97436.1 10 6 744.1 233.51 HUMAN 1 4.3234 1.8761 SQRRATRSGAQASST-p P02545;S12-p SQRRATRSGAQASST 0.342628074928273 0.0245137008897857 0.13 -0.37 8.63964067130614 21.9248368699099 0.13 -0.37 0.136784199409441 0.00641972334878656 1.74598341437761 -4.30023520847293 P02545 LMNA P02545.S12.p_LMNA P02545_S12s _1_1_12_12 P02545 P02545|P02545-3|P02545-6|P02545-2|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8717.8717.2 15.89 15.89 7.377 6 1 1 0 834.9118 1588.8492 S12s TMT10 12 (R) sGAQASSTPLSPTR (I) S(0.99)GAQAS(0.0)S(0.0)T(0.0)PLS(0.0)PT(0.0)R s:Phosphorylated S LMNA 74423.5 4 2 60.1 706.83 HUMAN 1 8.6396 -21.9248 SQRSRSWSYNGYYSD-p P30414;S410-p SQRSRSWSYNGYYSD 0.644135195234418 0.22169971325927 -0.0643333333333333 0.126333333333333 3.57233932309659 8.61551181924396 -0.0643333333333333 0.126333333333333 0.439304920518147 0.137546270143127 -0.834445062286382 1.74120889603063 P30414 NKTR P30414.S410.p_NKTR P30414_S410sS416s_2_2_410_416 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23403.23403.2 7.48 7.48 1.931 8 2 2 0 1079.9395 1998.9395 S410s S416s TMT10 408 (R) SWsYNGYYsDLSTAR (H) S(0.0)WS(0.99)Y(0.0)NGY(0.0)Y(0.0)S(0.99)DLS(0.0)T(0.0)AR s:Phosphorylated S NKTR 166700.6 4 30 202.1 449.45 HUMAN 1 -3.5723 8.6155 SQSASVESIPEVLEE-p Q92538-3;S352-p SQSASVESIPEVLEE 0.908751475442159 0.148903823333033 -0.0176666666666667 0.153 0.816825874834978 10.887870773718 -0.0176666666666667 0.153 0.82854750243064 0.0815103809032263 -0.227278192134467 2.13552511899659 Q92538 GBF1 Q92538.3.S352.p_GBF1 Q92538-3_S349sS352s_2_2_349_352 Q92538-3 Q92538|Q92538-2|Q92538-3 Isoform 3 of Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23856.23856.4 18.91 19.78 1.161 10 2 2 0 1109.4726 4274.9291 S349s S352s TMT10 345 (K) SQSAsVEsIPEVLEECTSPADHSDSASVHDMDYVNPR (G) S(0.0)QS(0.0)AS(0.99)VES(0.99)IPEVLEECT(0.0)S(0.0)PADHS(0.0)DS(0.0)AS(0.0)VHDMDY(0.0)VNPR C:Carbamidomethylation,s:Phosphorylated S GBF1 208066.7 4 16 543.1 276.05 HUMAN 1 -0.8168 10.8879 SQSENEASPVKRPRL-p Q9H8U3;S129-p SQSENEASPVKRPRL 0.775256619018995 0.00167630350559141 -0.047 -0.856 2.11745922556381 44.0897123629094 -0.047 -0.856 0.614121182434446 3.89967813735736e-05 -0.534659912581748 -12.1331714020645 Q9H8U3 ZFAND3 Q9H8U3.S129.p_ZFAND3 Q9H8U3_S129s _1_1_129_129 Q9H8U3 Q9H8U3 AN1-type zinc finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7346.7346.2 18.09 12.96 4.528 5 1 1 0 1117.5104 2154.0385 S129s TMT10 117 (R) SCGTDSQSENEAsPVK (R) S(0.0)CGT(0.0)DS(0.0)QS(0.0)ENEAS(0.99)PVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZFAND3 26039.5 9 1 4596.1 29.06 HUMAN 1 -2.1175 -44.0897 SQSGMTAYGTRRHLY-p B4DUT8;Y205-p SQSGMTAYGTRRHLY 0.257823157102062 0.409178301461255 0.219 0.183 11.1857680905525 5.16533370089414 0.219 0.183 0.076106752516729 0.304415407593716 2.18868679253095 1.1340361581528 B4DUT8 CNN2 B4DUT8.Y205.p_CNN2 B4DUT8_Y205y _1_1_205_205 B4DUT8 B4DUT8|Q99439|B4DDF4|Q99439-2 Calponin GG20160819_MSz_CCLE_T4D7_pY_Injection_02.5293.5293.3 17.69 17.69 1.997 5 1 1 0 618.9446 1774.8526 Y205y TMT10 196 (K) CASQSGMTAyGTRR (H) CAS(0.0)QS(0.0)GMT(0.0)AY(0.99)GT(0.0)RR C:Carbamidomethylation,y:Phosphorylated Y CNN2 36399.5 2 1 199.1 17.69 HUMAN 1 11.1858 5.1653 SQSHLRNSPEDKRAG-p Q13541;S101-p SQSHLRNSPEDKRAG 0.0520154613962689 0.0211734130477649 0.435666666666667 0.321 27.9140024965098 22.8979803755763 0.435666666666667 0.321 0.00161658948766964 0.005130999383126 5.82171949279859 4.52531213926116 Q13541 EIF4EBP1 Q13541.S101.p_EIF4EBP1 Q13541_S101s _1_1_101_101 Q13541 Q13541 Eukaryotic translation initiation factor 4E-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20348.20348.3 13.27 13.27 1.112 8 1 1 0 1243.2534 3647.7697 S101s Hydrogen 74 (R) DLPTIPGVTSPSSDEPPMEASQSHLRNsPEDK (R) DLPT(0.0)IPGVT(0.0)S(0.0)PS(0.0)S(0.0)DEPPMEAS(0.0)QS(0.0)HLRNS(0.99)PEDK K:TMT10-Lys-Only,s:Phosphorylated S EIF4EBP1 12693.9 24 7 227.1 424.6 HUMAN 1 27.914 22.898 SQSKGNKSYLEGSSD-p Q9UHI6;S672-p SQSKGNKSYLEGSSD 0.134264480831341 0.0222692068071635 -0.658666666666667 -0.352 17.9001541957383 22.5687509977534 -0.658666666666667 -0.352 0.0162175251620687 0.00553509271938479 -3.44208657324194 -4.44835257391463 Q9UHI6 DDX20 Q9UHI6.S672.p_DDX20 Q9UHI6_S672s _1_1_672_672 Q9UHI6 Q9UHI6|E9PJ60 Probable ATP-dependent RNA helicase DDX20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15111.15111.2 15.34 15.34 6.735 4 1 1 0 939.968 1798.9587 S672s TMT10 672 (K) sYLEGSSDNQLK (D) S(0.99)Y(0.0)LEGS(0.0)S(0.0)DNQLK K:TMT10,s:Phosphorylated S DDX20 93037.6 5 9 610.1 261.86 HUMAN 1 -17.9002 -22.5688 SQSKLSDSYSNTLPV-p I3L4C2;S369-p SQSKLSDSYSNTLPV 0.202089387369954 0.00457123761421351 -0.481333333333333 -0.571 13.4787763942249 34.2610772167666 -0.481333333333333 -0.571 0.0448871839803508 0.000374880006103167 -2.59770840224345 -7.82611332126061 I3L4C2 BAIAP2 I3L4C2.S369.p_BAIAP2 I3L4C2_S369s _1_1_369_369 I3L4C2 I3L4C2|Q9UQB8|Q9UQB8-2|Q9UQB8-6|Q9UQB8-4|Q9UQB8-5|Q9UQB8-3|B4DWA1 Brain-specific angiogenesis inhibitor 1-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18337.18337.3 14.11 14.11 1.69 5 1 1 0 554.2774 1580.8482 S369s TMT10 366 (K) LSDsYSNTLPVR (K) LS(0.0)DS(0.99)Y(0.0)S(0.0)NT(0.0)LPVR s:Phosphorylated S BAIAP2 61608.4 5 10 386.1 333.05 HUMAN 1 -13.4788 -34.2611 SQSLSLESLEPNSGA-p O43194;S430-p SQSLSLESLEPNSGA 0.493688343682119 0.223963577558372 0.104 0.131666666666667 5.64405420577374 8.55742844704552 0.104 0.131666666666667 0.27264314287972 0.139398196594241 1.22088501815177 1.73116064681781 O43194 GPR39 O43194.S430.p_GPR39 O43194_S430s _1_1_430_430 O43194 O43194 G-protein coupled receptor 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20568.20568.3 15.45 15.45 2.271 6 1 1 0 1255.9414 3685.8346 S430s TMT10 423 (K) SQSLSLEsLEPNSGAKPANSAAENGFQEHEV (-) S(0.0)QS(0.0)LS(0.0)LES(0.99)LEPNS(0.0)GAKPANS(0.0)AAENGFQEHEV K:TMT10,s:Phosphorylated S GPR39 52012.5 2 2 4825.1 26.23 HUMAN 1 5.6441 8.5574 SQSLTPVTPQKSSMA-p Q15329;T261-p SQSLTPVTPQKSSMA 0.207512802439712 0.00435596298746807 -0.239 -0.705666666666667 13.1773391203051 34.6957772900795 -0.239 -0.705666666666667 0.0481134044271836 0.000339173779581038 -2.54307213532563 -7.98288737438807 Q15329 E2F5 Q15329.T261.p_E2F5 Q15329_T261t _1_1_261_261 Q15329 Q15329|Q15329-2|Q15329-3|E5RHD4 Transcription factor E2F5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26626.26626.5 20.08 17.8 2.44 10 1 1 0 849.6526 4164.2683 T261t TMT10 232 (K) ESSSSKPVVFPVPPPDDLTQPSSQSLTPVtPQK (S) ES(0.0)S(0.0)S(0.0)S(0.0)KPVVFPVPPPDDLT(0.0)QPS(0.0)S(0.0)QS(0.0)LT(0.0)PVT(0.99)PQK K:TMT10,t:Phosphorylated T E2F5 37837.8 1 1 5362.1 20.08 HUMAN 1 -13.1773 -34.6958 SQSRGPASPLEAKKK-p Q13099;S133-p SQSRGPASPLEAKKK 0.036022948076598 0.00174551950392482 -0.659333333333333 -0.904333333333333 33.5257603553008 43.6283666042939 -0.659333333333333 -0.904333333333333 0.00044404191246628 4.33673953906995e-05 -7.58082621532559 -11.8902248982702 Q13099 IFT88 Q13099.S133.p_IFT88 Q13099_S133s _1_1_133_133 Q13099 Q13099|Q13099-2|Q13099-3 Intraflagellar transport protein 88 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12546.12546.2 11.2 7.44 99 1 1 1 0 704.386 1327.7986 S133s TMT10 130 (R) GPAsPLEAK (K) GPAS(1.0)PLEAK K:TMT10,s:Phosphorylated S IFT88 94838.7 4 1 5447.1 19.22 HUMAN 1 -33.5258 -43.6284 SQSSQDSSPVRNLQS-p O95251;S57-p SQSSQDSSPVRNLQS 0.0930004911854097 0.757356365974704 0.404666666666667 0.0426666666666667 21.9511739566154 1.66743402297873 0.404666666666667 0.0426666666666667 0.00638090978270176 0.681171701978076 4.31077295347917 0.433777532629701 O95251 KAT7 O95251.S57.p_KAT7 O95251_S56sS57s_2_2_56_57 O95251 O95251|O95251-4|O95251-2 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18411.18411.4 8.1 6.96 1.19 10 2 2 0 879.9057 3356.6668 S56s S57s TMT10 49 (R) LSQSSQDssPVRNLQSFGTEEPAYSTRR (V) LS(0.0)QS(0.0)S(0.0)QDS(0.99)S(0.99)PVRNLQS(0.0)FGT(0.0)EEPAY(0.0)S(0.0)T(0.0)RR s:Phosphorylated S KAT7 71325.8 4 15 691.1 243.06 HUMAN 1 21.9512 1.6674 SQSSRALTPPSYSTA-p Q5HY92;T400-p SQSSRALTPPSYSTA 0.314956511899696 0.775975528475931 0.166666666666667 -0.0386666666666666 9.38797557435958 1.52431178449093 0.166666666666667 -0.0386666666666667 0.115133694950018 0.703993779215751 1.87554704263304 -0.400633068041652 Q5HY92 FIGN Q5HY92.T400.p_FIGN Q5HY92_T400t _1_1_400_400 Q5HY92 Q5HY92 Fidgetin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15572.15572.2 13.46 11.37 3.717 5 1 1 0 837.4495 1593.9252 T400t TMT10 398 (R) ALtPPSYSTAK (N) ALT(0.99)PPS(0.0)Y(0.0)S(0.0)T(0.0)AK K:TMT10,t:Phosphorylated T FIGN 82658.3 3 1 6171.1 13.46 HUMAN 1 9.388 -1.5243 SQSTRRGSEDFETRS-p A2AJT9;S192-p SQSTRRGSEDFETRS 0.421053324853859 0.0247309816796438 -0.107333333333333 0.330333333333333 6.92631963061552 21.8656096382346 -0.107333333333333 0.330333333333334 0.202940177989512 0.00650787250564203 -1.44810959108627 4.2867676816663 A2AJT9 CXorf23 A2AJT9.S192.p_CXorf23 A2AJT9_S192s _1_1_192_192 A2AJT9 A2AJT9|A2AJT9-2|A2AJT9-3 BCLAF1 and THRAP3 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5171.5171.3 8.69 8.69 8.689 2 1 1 0 469.2159 1325.6647 S192s TMT10 190 (R) RGsEDFETR (S) RGS(0.99)EDFET(0.0)R s:Phosphorylated S BCLAF3 84269.3 2 5 1202.1 166.95 HUMAN 1 -6.9263 21.8656 SQSWREPSPPRKSSK-p O60293;S194-p SQSWREPSPPRKSSK 0.12125673604171 0.0737308875884868 0.296666666666667 0.321666666666667 19.0597242779451 15.0335206936682 0.296666666666667 0.321666666666667 0.0124173113930862 0.03137963810381 3.67999956739301 2.88285403237839 O60293 ZFC3H1 O60293.S194.p_ZFC3H1 O60293_S194s _1_1_194_194 O60293 O60293|O60293-2|G3V1X1|O60293-4 Zinc finger C3H1 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13851.13851.5 9.09 9.09 2.367 6 1 1 0 707.7573 3454.7803 S194s TMT10 170 (K) PGCRPPLGGGAGSGFSSSQSWREPsPPRK (S) PGCRPPLGGGAGS(0.0)GFS(0.0)S(0.0)S(0.0)QS(0.0)WREPS(0.99)PPRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZFC3H1 228291.3 1 5 311.1 371.67 HUMAN 1 19.0597 15.0335 SQSYRHYSDHWEDER-p Q9BYW2;S1098-p SQSYRHYSDHWEDER 0.266306780221325 0.297632568656203 0.199666666666667 0.116 10.8892592672613 6.94761078295615 0.199666666666667 0.116 0.081484325184756 0.201947704830444 2.13671956431279 1.45144161182012 Q9BYW2 SETD2 Q9BYW2.S1098.p_SETD2 Q9BYW2_S1098s _1_1_1098_1098 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8260.8260.4 17.89 17.89 5.534 3 1 1 0 542.741 2087.9732 S1098s TMT10 1096 (R) HYsDHWEDERLESR (R) HY(0.0)S(0.99)DHWEDERLES(0.0)R s:Phosphorylated S SETD2 290615.4 2 18 58.1 711.11 HUMAN 1 10.8893 6.9476 SQTCLLGSEENLAPL-p O94966-5;S324-p SQTCLLGSEENLAPL 0.251129502322871 0.11219674479053 0.194 0.2 11.4507482504652 12.5360550182445 0.194 0.2 0.0716020035750795 0.0557692107253655 2.23527387760851 2.42651794903405 O94966 USP19 O94966.5.S324.p_USP19 O94966-5_S324s _1_1_324_324 O94966-5 O94966-5|O94966-6|O94966-7 Isoform 5 of Ubiquitin carboxyl-terminal hydrolase 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35339.35339.4 13.8 12.52 1.231 4 1 1 0 1268.6102 4991.4492 S324s Hydrogen 291 (R) GDAPPFVADPATQVEADEQLCIPPLNSQTCLLGsEENLAPLAGEK (A) GDAPPFVADPAT(0.0)QVEADEQLCIPPLNS(0.0)QT(0.0)CLLGS(0.99)EENLAPLAGEK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S USP19 158029.3 1 2 2308.1 88.68 HUMAN 1 11.4507 12.5361 SQTEKLMSPVLKQHL-p Q6N021;S696-p SQTEKLMSPVLKQHL 0.239732536853408 0.00508031510029947 -0.211 -0.621333333333333 11.8575089067829 33.4180101789148 -0.211 -0.621333333333333 0.0652002272334336 0.000455196571265752 -2.3070858801498 -7.52958438997872 Q6N021 TET2 Q6N021.S696.p_TET2 Q6N021_S696s _1_1_696_696 Q6N021 E7EQS8|Q6N021|Q6N021-3 Methylcytosine dioxygenase TET2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23077.23077.2 10.05 5.32 99 1 1 1 0 663.3876 1245.8005 S696s TMT10 694 (K) LMsPVLK (Q) LMS(1.0)PVLK K:TMT10,s:Phosphorylated S TET2 226374.6 1 9 594.1 264.06 HUMAN 1 -11.8575 -33.418 SQTNGGPSPTPKAHP-p Q6PJG9;S565-p SQTNGGPSPTPKAHP 0.580949089819777 0.0313314214724598 -0.0766666666666667 -0.282333333333333 4.33866397611704 20.3166606876762 -0.0766666666666667 -0.282333333333333 0.368242238899162 0.00929680948431638 -0.98133685338273 -3.94347625661617 Q6PJG9 LRFN4 Q6PJG9.S565.p_LRFN4 Q6PJG9_S565s _1_1_565_565 Q6PJG9 Q6PJG9 Leucine-rich repeat and fibronectin type-III domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8203.8203.3 20.06 20.06 2.382 5 1 1 0 758.3937 2193.2028 S565s TMT10 553 (K) LSHVQSQTNGGPsPTPK (A) LS(0.0)HVQS(0.0)QT(0.0)NGGPS(0.99)PT(0.0)PK K:TMT10,s:Phosphorylated S LRFN4 67771.9 3 1 2562.1 78.45 HUMAN 1 -4.3387 -20.3167 SQTNIKKSPGKVKEV-p Q9UMY1;S133-p SQTNIKKSPGKVKEV 0.317660628942769 0.000952253650599092 -0.225666666666667 -2.24333333333333 9.32865820313963 65.3991724017729 -0.225666666666667 -2.24333333333333 0.11671701704247 2.88458114096241e-07 -1.86527149156317 -30.3868468949465 Q9UMY1 NOL7 Q9UMY1.S133.p_NOL7 Q9UMY1_S133s _1_1_133_133 Q9UMY1 Q9UMY1|Q9UMY1-2 Nucleolar protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11815.11815.3 12.39 6.87 1.841 5 1 1 0 857.5074 2490.5425 S133s TMT10 122 (K) LTTASQTNIKKsPGK (V) LT(0.0)T(0.0)AS(0.0)QT(0.0)NIKKS(0.99)PGK K:TMT10,s:Phosphorylated S NOL7 29482.9 4 2 4036.1 38.77 HUMAN 1 -9.3287 -65.3992 SQTPPRRSRSGSSQP-p Q9UQ35;S797-p SQTPPRRSRSGSSQP 0.0320113506588935 0.424802823656553 -0.598666666666667 -0.143666666666667 34.9956692956032 4.9486972771607 -0.598666666666667 -0.143666666666667 0.00031654325978325 0.319985480385518 -8.10833593094042 -1.09442888573384 Q9UQ35 SRRM2 Q9UQ35.S797.p_SRRM2 Q9UQ35_S797sS799s_2_2_797_799 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3696.3696.2 7.36 7.36 1.256 4 2 2 0 661.789 1162.6378 S797s S799s Hydrogen 797 (R) sRsGSSQPK (A) S(0.99)RS(0.99)GS(0.0)S(0.0)QPK K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 2 186 2.1 3310.34 HUMAN 1 -34.9957 -4.9487 SQTQGGGSVTKKRKL-p P02545;S414-p SQTQGGGSVTKKRKL 0.124850140124064 0.00455061128120994 0.298666666666667 -0.825 18.7956716459127 34.3456423730301 0.298666666666667 -0.825 0.0131957122135121 0.000367651009413012 3.62512245306943 -7.85640190673131 P02545 LMNA P02545.S414.p_LMNA P02545_S414s _1_1_414_414 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.4290.4290.4 16.99 16.99 1.503 7 1 1 0 604.3213 2334.298 S414s TMT10 402 (R) ASSHSSQTQGGGsVTKK (R) AS(0.0)S(0.0)HS(0.0)S(0.0)QT(0.0)QGGGS(0.99)VT(0.0)KK K:TMT10,s:Phosphorylated S LMNA 74423.5 9 23 60.1 706.83 HUMAN 1 18.7957 -34.3456 SQTQQEDSGEQPLPP-p Q8N2G8;S110-p SQTQQEDSGEQPLPP 0.212264138240011 0.338838662509992 -0.294 -0.136333333333333 12.9895289833761 6.22701873984088 -0.294 -0.136333333333333 0.0502397074336675 0.238395539905694 -2.50918027267695 -1.32457968827256 Q8N2G8 GHDC Q8N2G8.S110.p_GHDC Q8N2G8_S110s _1_1_110_110 Q8N2G8 Q8N2G8|K7ESN3|Q8N2G8-2 GH3 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.37271.37271.4 16.98 16.98 3.187 7 1 1 0 1140.585 4479.3255 S110s TMT10 102 (K) ASQTQQEDsGEQPLPPTSNQDLGEASLQATLLGLAALNK (A) AS(0.0)QT(0.0)QQEDS(0.99)GEQPLPPT(0.0)S(0.0)NQDLGEAS(0.0)LQAT(0.0)LLGLAALNK K:TMT10,s:Phosphorylated S GHDC 58092.4 1 2 3429.1 51.3 HUMAN 1 -12.9895 -6.227 SQTSEDQSLSDFEIS-p Q8TEQ0;S646-p SQTSEDQSLSDFEIS 0.373695113080525 0.363785396069928 0.143 0.121333333333333 7.92117539525713 5.82145682934945 0.143 0.121333333333333 0.161392169826214 0.261730489294474 1.62148360818628 1.25240184531171 Q8TEQ0 SNX29 Q8TEQ0.S646.p_SNX29 Q8TEQ0_S646s _1_1_646_646 Q8TEQ0 Q8TEQ0|Q8TEQ0-2 Sorting nexin-29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26989.26989.4 17.78 17.78 1.365 6 1 1 0 939.4644 3674.8347 S646s TMT10 625 (R) QELIDLRGPVPGDLSQTSEDQsLSDFEISNR (A) QELIDLRGPVPGDLS(0.0)QT(0.0)S(0.0)EDQS(0.99)LS(0.0)DFEIS(0.0)NR s:Phosphorylated S SNX29 91651.5 1 8 764.1 229.17 HUMAN 1 7.9212 5.8215 SQTTKKASAISIKLG-p Q8WW12;S84-p SQTTKKASAISIKLG 0.96583285798623 0.36962998145014 0.00966666666666666 -0.116666666666667 0.292222184655275 5.73318729751095 0.00966666666666666 -0.116666666666667 0.934927171077466 0.267104540259696 0.085514699667498 -1.23660159005092 Q8WW12 PCNP Q8WW12.S84.p_PCNP Q8WW12_S84s _1_1_84_84 Q8WW12 Q8WW12|Q8WW12-2 PEST proteolytic signal-containing nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13213.13213.3 9.85 9.85 1.217 2 1 1 0 528.9952 1505.003 S84s TMT10 82 (K) KAsAISIK (L) KAS(0.99)AIS(0.0)IK K:TMT10,s:Phosphorylated S PCNP 18924.5 1 4 1455.1 140.6 HUMAN 1 0.2922 -5.7332 SQTTRSNTLPSDVGR-p Q9Y3R0-2;T957-p SQTTRSNTLPSDVGR 0.716074269063875 0.628471862860539 -0.0656666666666667 -0.056 2.73634391601228 2.74248397985193 -0.0656666666666667 -0.056 0.532556400257101 0.531804002977374 -0.666332422441428 -0.667515133193206 Q9Y3R0 GRIP1 Q9Y3R0.2.T957.p_GRIP1 Q9Y3R0-2_T957t _1_1_957_957 Q9Y3R0-2 Q9Y3R0|Q9Y3R0-2|Q9Y3R0-3 Isoform 2 of Glutamate receptor-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9485.9485.3 11.66 11.66 2.127 3 1 1 0 571.311 1631.9481 T957t TMT10 955 (R) SNtLPSDVGRK (S) S(0.0)NT(0.99)LPS(0.0)DVGRK K:TMT10,t:Phosphorylated T GRIP1 121491.7 3 7 1840.1 111.69 HUMAN 1 -2.7363 -2.7425 SQVDRLQSEPESIRK-p P09496-2;S105-p SQVDRLQSEPESIRK 0.708335088412972 0.0808369700683631 -0.07 0.223 2.81481300201801 14.4864161797385 -0.07 0.223 0.523020485848853 0.035592490846999 -0.682541021457484 2.78093258770581 P09496 CLTA P09496.2.S105.p_CLTA P09496-2_S105s _1_1_105_105 P09496-2 F8WF69|P09496|P09496-3|P09496-4|P09496-2 Isoform Non-brain of Clathrin light chain A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6780.6780.3 8.72 8.72 8.72 2 1 1 0 499.2623 1415.8056 S105s Hydrogen 103 (R) LQsEPESIRK (W) LQS(0.99)EPES(0.0)IRK K:TMT10-Lys-Only,s:Phosphorylated S CLTA 23718.5 3 1 3013.1 63.28 HUMAN 1 -2.8148 14.4864 SQVFASDSPPQSLLT-p Q9NRM7;S342-p SQVFASDSPPQSLLT 0.255498822846135 0.173010289789903 0.165666666666667 -0.191 11.2697657495859 10.0177878358125 0.165666666666667 -0.191 0.0746489021561883 0.0995912575793391 2.20343915047563 -1.98399706642616 Q9NRM7 LATS2 Q9NRM7.S342.p_LATS2 Q9NRM7_S342s _1_1_342_342 Q9NRM7 Q9NRM7 Serine/threonine-protein kinase LATS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22157.22157.3 10.72 10.72 1.431 6 1 1 0 742.7059 2146.1342 S342s TMT10 335 (R) SQVFASDsPPQSLLTPSR (N) S(0.0)QVFAS(0.0)DS(0.99)PPQS(0.0)LLT(0.0)PS(0.0)R s:Phosphorylated S LATS2 121046.5 1 13 824.2 217.64 HUMAN 1 11.2698 -10.0178 SQVKPGDSLPRRGPG-p P08913;S331-p SQVKPGDSLPRRGPG 0.922345826324192 0.973596765748086 0.0196666666666667 0.00333333333333334 0.687613455205053 0.163356302136881 0.0196666666666667 0.00333333333333334 0.853569040339964 0.963084447794745 0.193573012579562 0.0484602449008831 P08913 ADRA2A P08913.S331.p_ADRA2A P08913_S331s _1_1_331_331 P08913 P08913 Alpha-2A adrenergic receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9574.9574.3 8.18 8.18 4.854 2 1 1 0 598.329 1713.0059 S331s TMT10 323 (R) ASQVKPGDsLPR (R) AS(0.0)QVKPGDS(0.99)LPR K:TMT10,s:Phosphorylated S ADRA2A 49583.5 2 1 5347.1 20.21 HUMAN 1 0.6876 0.1634 SQVKSQISELNLLMK-p Q9NQ86-4;S267-p SQVKSQISELNLLMK 0.491539311019326 0.0569362406565022 -0.168333333333333 0.407 5.67803140553854 16.5840774590812 -0.168333333333333 0.407 0.270518430739914 0.0219579733723337 -1.22698799878204 3.17880976527251 Q9NQ86 TRIM36 Q9NQ86.4.S267.p_TRIM36 Q9NQ86-4_S267s _1_1_267_267 Q9NQ86-4 Q9NQ86|Q9NQ86-4|E9PBG3 Isoform 4 of E3 ubiquitin-protein ligase TRIM36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30502.30502.3 12.9 11.21 2.25 2 1 1 0 605.3354 1734.0236 S267s TMT10 264 (K) SQIsELNLLMK (E) S(0.0)QIS(0.99)ELNLLMK K:TMT10,s:Phosphorylated S TRIM36 83165.6 1 6 1499.1 136.16 HUMAN 1 -5.678 16.5841 SQVPNPESPGKSFQP-p Q9ULM3;S447-p SQVPNPESPGKSFQP 0.447213665959151 0.00387979257248964 -0.103666666666667 -0.720333333333333 6.4455625390292 35.6356236922416 -0.103666666666667 -0.720333333333334 0.226695942023734 0.000273172911087214 -1.36356834706141 -8.3311772737935 Q9ULM3 YEATS2 Q9ULM3.S447.p_YEATS2 Q9ULM3_S447s _1_1_447_447 Q9ULM3 Q9ULM3 YEATS domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17874.17874.2 17.38 13.63 7.549 2 1 1 0 1058.0658 2035.1588 S447s TMT10 436 (K) IVPQSQVPNPEsPGK (S) IVPQS(0.0)QVPNPES(0.99)PGK K:TMT10,s:Phosphorylated S YEATS2 151691.8 3 4 1060.1 182.14 HUMAN 1 -6.4456 -35.6356 SQVQRARYEAANWKY-p G3V5Z7;Y96-p SQVQRARYEAANWKY 0.487801125637301 0.736421972678031 0.401666666666667 -0.132666666666667 5.74480895464447 1.83174892303418 0.401666666666667 -0.132666666666667 0.266390727898799 0.65588108690676 1.23896691151482 -0.471157554139736 G3V5Z7 NotFound G3V5Z7.Y96.p_NotFound G3V5Z7_Y96y _1_1_96_96 G3V5Z7 G3V5Z7|P60900|P60900-2|G3V295|P60900-3|G3V3I1 Proteasome subunit alpha type GG20160819_MSz_CCLE_T4D7_pY_Injection_01.10898.10898.2 8.05 5.88 99 1 1 1 0 595.7771 1110.5781 Y96y Hydrogen 96 (R) yEAANWK (Y) Y(1.0)EAANWK K:TMT10-Lys-Only,y:Phosphorylated Y PSMA6 28546.2 1 1 96.1 29.2 HUMAN 1 5.7448 -1.8317 SQYRQLLSDYGPPSL-p O14519;S40-p SQYRQLLSDYGPPSL 0.970985350453234 0.389594562520285 -0.0126666666666667 -0.212 0.251229910284996 5.44388117056211 -0.0126666666666667 -0.212 0.943793558640026 0.285503793392138 -0.0738359474008099 -1.18455778804535 O14519 CDK2AP1 O14519.S40.p_CDK2AP1 O14519_S40s _1_1_40_40 O14519 O14519|O14519-2 Cyclin-dependent kinase 2-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24552.24552.4 12.15 7.61 1.144 8 1 1 0 815.9136 3180.6577 S40s TMT10 37 (R) QLLsDYGPPSLGYTQGTGNSQVPQSK (Y) QLLS(0.99)DY(0.0)GPPS(0.0)LGY(0.0)T(0.0)QGT(0.0)GNS(0.0)QVPQS(0.0)K K:TMT10,s:Phosphorylated S CDK2AP1 12421.8 1 1 6350.1 12.15 HUMAN 1 -0.2512 -5.4439 SRAAGSPSPLPAPDP-p Q9BZE9-2;S596-p SRAAGSPSPLPAPDP 0.48665885203013 0.764274574239123 -0.0963333333333333 -0.033 5.76128262704299 1.61246756872893 -0.0963333333333334 -0.033 0.265382167770259 0.689847735680733 -1.24191891232265 -0.421115117441961 Q9BZE9 ASPSCR1 Q9BZE9.2.S596.p_ASPSCR1 Q9BZE9-2_S596s _1_1_596_596 Q9BZE9-2 Q9BZE9-2|Q9BZE9-3 Isoform 2 of Tether containing UBX domain for GLUT4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15433.15433.3 20.58 20.58 1.636 2 1 1 0 671.0272 1931.1002 S596s TMT10 591 (R) AAGSPsPLPAPDPAPK (S) AAGS(0.0)PS(0.99)PLPAPDPAPK K:TMT10,s:Phosphorylated S ASPSCR1 70673.5 8 4 1375.1 148.73 HUMAN 1 -5.7613 -1.6125 SRAEEPPSPPVPKAS-p Q96JK2;S794-p SRAEEPPSPPVPKAS 0.792212556321118 0.860715159833817 0.05 0.018 1.95110143710598 0.918460015049662 0.05 0.018 0.638101633351693 0.809382851119478 0.497945664804182 0.253273351552601 Q96JK2 DCAF5 Q96JK2.S794.p_DCAF5 Q96JK2_S794s _1_1_794_794 Q96JK2 Q96JK2|Q96JK2-3|Q96JK2-2 DDB1- and CUL4-associated factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14432.14638.2 16.35 13.56 99 1 1 1 0 843.4493 1605.9252 S794s TMT10 789 (R) AEEPPsPPVPK (A) AEEPPS(1.0)PPVPK K:TMT10,s:Phosphorylated S DCAF5 105045.5 8 8 948.1 196.79 HUMAN 1 1.9511 0.9185 SRAGGPTTPLSPTRL-p P20700;T20-p SRAGGPTTPLSPTRL 0.792212556321118 0.244728822520691 0.0423333333333333 -0.213666666666667 1.95123611774215 8.05574546203957 0.0423333333333333 -0.213666666666667 0.638081845257449 0.15646797204983 0.497975642311047 -1.64430459662617 P20700 LMNB1 P20700.T20.p_LMNB1 P20700_T20t _1_1_20_20 P20700 P20700|E9PBF6|A0A0D9SFE5 Lamin-B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8843.8843.2 9.9 9.9 1.307 4 1 1 0 732.3762 1383.7793 T20t TMT10 15 (R) AGGPTtPLSPTR (L) AGGPT(0.0)T(0.99)PLS(0.0)PT(0.0)R t:Phosphorylated T LMNB1 66692.5 4 2 440.1 312.01 HUMAN 1 1.9512 -8.0557 SRALIGATNPADAPP-p Q13232;T111-p SRALIGATNPADAPP 0.886408021506479 0.00986683840827499 -0.0216666666666667 -0.615 1.02174600094226 28.2236522108025 -0.0216666666666667 -0.615 0.790360814116213 0.00150534061362254 -0.279324322840735 -5.90071943637402 Q13232 NME3 Q13232.T111.p_NME3 Q13232_T111t _1_1_111_111 Q13232 Q13232|H3BPR2 Nucleoside diphosphate kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18994.18994.3 15.44 15.44 11.908 2 1 1 0 648.6776 1864.049 T111t TMT10 106 (R) ALIGAtNPADAPPGTIR (G) ALIGAT(0.99)NPADAPPGT(0.0)IR t:Phosphorylated T NME3 19242.9 2 1 5909.1 15.44 HUMAN 1 -1.0217 -28.2237 SRANTPDSDITEKTE-p Q9H4L7-2;S57-p SRANTPDSDITEKTE 0.627614753378983 0.218400004885306 -0.0696666666666667 0.123666666666667 3.75947318092283 8.69464244243868 -0.0696666666666667 0.123666666666667 0.42077766754503 0.135062802138901 -0.87086410992979 1.75489694289286 Q9H4L7 SMARCAD1 Q9H4L7.2.S57.p_SMARCAD1 Q9H4L7-2_T54tS57s_2_2_54_57 Q9H4L7-2 Q9H4L7-2|D6RAY8 Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13374.13374.4 22.63 22.63 3.781 7 2 2 0 874.148 3333.6334 T54t S57s Hydrogen 52 (R) ANtPDsDITEKTEDSSVPETPDNERK (A) ANT(0.99)PDS(0.99)DIT(0.0)EKT(0.0)EDS(0.0)S(0.0)VPET(0.0)PDNERK K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S SMARCAD1 118399.2 3 12 250.1 406.83 HUMAN 1 -3.7595 8.6946 SRAPTSVTPVAPGKG-p Q8IZD4;T392-p SRAPTSVTPVAPGKG 0.173687060223618 0.0083364618978126 0.234666666666667 -0.431333333333333 15.1457942550543 29.5573792156294 0.234666666666667 -0.431333333333333 0.0305788095791497 0.00110729178638045 2.90583999863186 -6.28880243219264 Q8IZD4 DCP1B Q8IZD4.T392.p_DCP1B Q8IZD4_T392t _1_1_392_392 Q8IZD4 Q8IZD4|Q8IZD4-2|F5GZK9 mRNA-decapping enzyme 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9692.9692.2 15.52 15.52 1.361 3 1 1 0 717.384 1353.7939 T392t Hydrogen 387 (R) APTSVtPVAPGK (G) APT(0.0)S(0.0)VT(0.99)PVAPGK K:TMT10-Lys-Only,t:Phosphorylated T DCP1B 68121.1 3 7 577.1 267.77 HUMAN 1 15.1458 -29.5574 SRARLDQSDEDFKPR-p Q9P2E5;S64-p SRARLDQSDEDFKPR 0.897911962932873 0.152887941390684 0.031 0.213666666666667 0.917514140448704 10.7273945966548 0.031 0.213666666666667 0.809559150402271 0.0845786093847583 0.253057783457931 2.10749372834528 Q9P2E5 CHPF2 Q9P2E5.S64.p_CHPF2 Q9P2E5_S64s _1_1_64_64 Q9P2E5 Q9P2E5|G5E9W2|Q9P2E5-2 Chondroitin sulfate glucuronyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9139.9139.3 10.28 10.28 99 1 1 1 0 553.5933 1578.7961 S64s Hydrogen 61 (R) LDQsDEDFKPR (I) LDQS(1.0)DEDFKPR K:TMT10-Lys-Only,s:Phosphorylated S CHPF2 86688.3 1 1 6662.1 10.28 HUMAN 1 0.9175 10.7274 SRARNSGTQSDGEEK-p Q6P1M3;T963-p SRARNSGTQSDGEEK 0.351973345829348 0.61151237406818 0.186 0.0556666666666667 8.42080208975149 2.90227856292095 0.186 0.0556666666666667 0.143853287397464 0.512592377480598 1.70809171318176 0.700396628392319 Q6P1M3 LLGL2 Q6P1M3.T963.p_LLGL2 Q6P1M3_T963t _1_1_963_963 Q6P1M3 Q6P1M3|J3QRV5|Q6P1M3-2 Lethal(2) giant larvae protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10618.10618.3 16.53 16.53 1.462 3 1 1 0 791.0316 2291.1135 T963t Hydrogen 960 (R) NSGtQSDGEEKQPGLVMER (A) NS(0.0)GT(0.99)QS(0.0)DGEEKQPGLVMER K:TMT10-Lys-Only,t:Phosphorylated T LLGL2 114415.8 2 11 881.1 207.2 HUMAN 1 8.4208 2.9023 SRASENQSPSSSNYF-p O15209;S202-p SRASENQSPSSSNYF 0.117289050573617 0.00310534343687547 0.367666666666667 0.635333333333333 19.3645057115354 37.6739460410072 0.367666666666667 0.635333333333334 0.0115757577306887 0.000170846228455174 3.74387425509243 9.13277814809278 O15209 ZBTB22 O15209.S202.p_ZBTB22 O15209_S202s _1_1_202_202 O15209 O15209 Zinc finger and BTB domain-containing protein 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11369.11369.3 11.57 11.57 2.999 7 1 1 0 689.6391 1986.9355 S202s TMT10 197 (R) ASENQsPSSSNYFSPR (E) AS(0.0)ENQS(0.99)PS(0.0)S(0.0)S(0.0)NY(0.0)FS(0.0)PR s:Phosphorylated S ZBTB22 66342.9 2 1 3284.2 55.02 HUMAN 1 19.3645 37.6739 SRCDGDASPPSPARW-p F8W8D3;S20-p SRCDGDASPPSPARW 0.360974093926027 0.10048620458838 0.132333333333333 -0.359333333333333 8.22749664202309 13.1848844631643 0.132333333333333 -0.359333333333333 0.1504008656159 0.0480298857623324 1.67460383404463 -2.54301705561292 F8W8D3 NotFound F8W8D3.S20.p_NotFound F8W8D3_S20s _1_1_20_20 F8W8D3 F8W8D3|Q14493|E7EUV9 Histone RNA hairpin-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6108.6108.3 8.37 8.37 8.365 2 1 1 0 513.5557 1458.6845 S20s TMT10 15 (R) CDGDAsPPSPAR (W) CDGDAS(0.99)PPS(0.0)PAR C:Carbamidomethylation,s:Phosphorylated S SLBP 32379.3 2 2 2635.1 75.75 HUMAN 1 8.2275 -13.1849 SRCTSVSSLDSFESR-p P25054;S1392-p SRCTSVSSLDSFESR 0.490269854004561 0.360885292368447 0.145666666666667 -0.111666666666667 5.70505222194899 5.87333367250412 0.145666666666667 -0.111666666666667 0.26884055160087 0.258622694851415 1.23183761382227 -1.26167176393602 P25054 APC P25054.S1392.p_APC P25054_S1392s _1_1_1392_1392 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15947.15947.2 13.42 12.98 1.133 6 1 1 0 892.3912 1703.8108 S1392s TMT10 1387 (R) CTSVSsLDSFESR (S) CT(0.0)S(0.0)VS(0.0)S(0.99)LDS(0.0)FES(0.0)R C:Carbamidomethylation,s:Phosphorylated S APC 313808.5 2 19 33.1 890.71 HUMAN 1 5.7051 -5.8733 SRDAPAGSPPASPGP-p A0A0A0MRX4;S569-p SRDAPAGSPPASPGP 0.3462072687631 0.302030630780739 0.132 0.164666666666667 8.56072173266841 6.86370810330597 0.132 0.164666666666667 0.139292530029561 0.205887125231533 1.73232039038524 1.43674509018596 A0A0A0MRX4 RGL3 A0A0A0MRX4.S569.p_RGL3 A0A0A0MRX4_S569s _1_1_569_569 A0A0A0MRX4 Q3MIN7-2|A0A0A0MRX4 Ral guanine nucleotide dissociation stimulator-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31594.31594.5 25.09 25.09 3.35 7 1 1 0 897.0861 4401.4335 S569s TMT10 564 (R) DAPAGsPPASPGPQGPSTKLPLSLDLPSPRPFALPLGSPR (I) DAPAGS(0.99)PPAS(0.0)PGPQGPS(0.0)T(0.0)KLPLS(0.0)LDLPS(0.0)PRPFALPLGS(0.0)PR K:TMT10,s:Phosphorylated S RGL3 78574.5 6 5 1395.1 146.85 HUMAN 1 8.5607 6.8637 SRDERERSTSKKKKS-p Q05519-2;S394-p SRDERERSTSKKKKS 0.825699240764863 0.0101813791321893 -0.0943333333333333 1.54266666666667 1.60491176460336 27.9843481921095 -0.0943333333333334 1.54266666666667 0.691048969270293 0.00159061539232755 -0.419413467576204 5.83310150872086 Q05519 SRSF11 Q05519.2.S394.p_SRSF11 Q05519-2_S394s _1_1_394_394 Q05519-2 Q05519|Q05519-2|Q5T757 Isoform 2 of Serine/arginine-rich splicing factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.2702.2702.5 10 7.26 1.158 4 1 1 0 404.2177 1937.0929 S394s Hydrogen 387 (R) SRDERERsTSKK (K) S(0.0)RDERERS(0.99)T(0.0)S(0.0)KK K:TMT10-Lys-Only,s:Phosphorylated S SRSF11 53527.2 2 6 185.1 475.04 HUMAN 1 -1.6049 27.9843 SRDERFRSDVHTEAV-p Q14689;S94-p SRDERFRSDVHTEAV 0.814324717106937 0.00351616489422878 0.135333333333333 -0.711333333333333 1.71401186941837 36.672633410619 0.135333333333333 -0.711333333333333 0.673905208631107 0.000215147675847579 0.444493296569545 -8.73084803577065 Q14689 DIP2A Q14689.S94.p_DIP2A Q14689_S94s _1_1_94_94 Q14689 Q14689 Disco-interacting protein 2 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16754.16754.4 17.47 9.85 1.183 2 1 1 0 571.0582 2201.2443 S94s TMT10 92 (R) FRsDVHTEAVQAALAK (Y) FRS(0.99)DVHT(0.0)EAVQAALAK K:TMT10,s:Phosphorylated S DIP2A 172477.2 1 1 4986.1 24.17 HUMAN 1 1.714 -36.6726 SRDERYRSDVHTEAV-p A0A0U1RQW6;S145-p SRDERYRSDVHTEAV 0.690001442222247 0.270658855949943 0.103333333333333 -0.195333333333333 3.01965115718419 7.47353577261389 0.103333333333333 -0.195333333333333 0.498924561480359 0.178914864035494 0.724400851088956 -1.54321899282875 A0A0U1RQW6 NotFound A0A0U1RQW6.S145.p_NotFound A0A0U1RQW6_S145s _1_1_145_145 A0A0U1RQW6 A0A0U1RQW6|Q9Y2E4|E7EPU2 Disco-interacting protein 2 homolog C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13964.13964.4 18.54 16.21 1.142 3 1 1 0 575.0576 2217.2392 S145s TMT10 143 (R) YRsDVHTEAVQAALAK (H) Y(0.0)RS(0.99)DVHT(0.0)EAVQAALAK K:TMT10,s:Phosphorylated S DIP2C 180479.8 3 4 3066.1 61.65 HUMAN 1 3.0197 -7.4735 SRDHSSQSEEEVVEG-p O60238;S120-p SRDHSSQSEEEVVEG 0.403056299574652 0.00105578872948118 0.187 1.13433333333333 7.28655982309036 50.6274143197164 0.187 1.13433333333333 0.186785869189535 8.65483052286699e-06 1.51108662064268 16.1238829444809 O60238 BNIP3L O60238.S120.p_BNIP3L O60238_S120s _1_1_120_120 O60238 O60238|O60238-2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8281.8771.3 14.78 11.12 2.112 3 1 1 0 743.0114 2147.0504 S120s TMT10 115 (R) DHSSQsEEEVVEGEK (E) DHS(0.0)S(0.0)QS(0.99)EEEVVEGEK K:TMT10,s:Phosphorylated S BNIP3L 24044.1 5 2 2458.1 82.41 HUMAN 1 7.2866 50.6274 SRDIFRMSNSFTAIA-p Q14D04;S353-p SRDIFRMSNSFTAIA 0.197586040353389 0.0692199894531722 -0.266666666666667 -0.228 13.7288924310278 15.4207044976517 -0.266666666666667 -0.228 0.0423751020298506 0.0287031493158853 -2.64327620536208 -2.95573792663766 Q14D04 VEPH1 Q14D04.S353.p_VEPH1 Q14D04_S353sS355s_2_2_353_355 Q14D04 Q14D04|Q14D04-2 Ventricular zone-expressed PH domain-containing protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28754.28754.3 8.01 8.01 2.004 3 2 2 0 740.3639 2059.1411 S353s S355s TMT10 348 (R) DIFRMsNsFTAIAK (L) DIFRMS(0.99)NS(0.99)FT(0.0)AIAK K:TMT10,s:Phosphorylated S VEPH1 95542.4 1 12 341.1 353.64 HUMAN 1 -13.7289 -15.4207 SRDKRPLSGPDVGTP-p O96013;S181-p SRDKRPLSGPDVGTP 0.0331700936304985 0.0278525049398698 -0.674333333333333 -0.300333333333333 34.6910811079975 21.0759332358786 -0.674333333333333 -0.300333333333333 0.000339540738727639 0.00780560690939016 -7.99650170074532 -4.10964456540226 O96013 PAK4 O96013.S181.p_PAK4 O96013_S181s _1_1_181_181 O96013 O96013 Serine/threonine-protein kinase PAK 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16642.16642.2 17.93 17.93 3.642 3 1 1 0 1257.6748 2434.3818 S181s TMT10 178 (K) RPLsGPDVGTPQPAGLASGAK (L) RPLS(0.99)GPDVGT(0.0)PQPAGLAS(0.0)GAK K:TMT10,s:Phosphorylated S PAK4 64356.2 13 5 573.1 269.06 HUMAN 1 -34.6911 -21.0759 SRDLISNSPRVIPVT-p P19387;S124-p SRDLISNSPRVIPVT 0.368352437732521 0.518375769206948 -0.158333333333333 -0.0683333333333333 8.04268823992671 3.83310336353526 -0.158333333333333 -0.0683333333333333 0.156939106605496 0.413703946318267 -1.64256509216006 -0.884944311062297 P19387 POLR2C P19387.S124.p_POLR2C P19387_S124s _1_1_124_124 P19387 P19387 DNA-directed RNA polymerase II subunit RPB3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10239.10239.2 9.67 3.64 2.348 2 1 1 0 605.8052 1130.6367 S124s TMT10 119 (R) DLISNsPR (V) DLIS(0.0)NS(0.99)PR s:Phosphorylated S POLR2C 31782.9 1 1 6766.1 9.67 HUMAN 1 -8.0427 -3.8331 SRDMQGLSLDAASQP-p Q96EY5;S170-p SRDMQGLSLDAASQP 0.881617342419507 0.102258132282505 -0.0266666666666667 -0.203333333333333 1.07619809015581 13.0810858858439 -0.0266666666666667 -0.203333333333333 0.78051308993498 0.0491916524223163 -0.292884197371345 -2.52429315969089 Q96EY5 MVB12A Q96EY5.S170.p_MVB12A Q96EY5_S170s _1_1_170_170 Q96EY5 Q96EY5|E9PQA6|Q96EY5-3 Multivesicular body subunit 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21713.21713.3 19.3 15.19 6.479 3 1 1 0 904.4662 2631.4176 S170s TMT10 165 (R) DMQGLsLDAASQPSKGGLLER (T) DMQGLS(0.99)LDAAS(0.0)QPS(0.0)KGGLLER K:TMT10,s:Phosphorylated S MVB12A 29124.8 8 2 1382.1 148.21 HUMAN 1 -1.0762 -13.0811 SRDMYMESEGGDGYL-p P08621;S417-p SRDMYMESEGGDGYL 0.362826680057782 0.0945894044974854 0.132333333333333 0.212 8.18118206248123 13.5438920853098 0.132333333333333 0.212 0.152013372350718 0.0442191908644217 1.66657704200405 2.60804769008653 P08621 SNRNP70 P08621.S417.p_SNRNP70 P08621_S417s_1_1_417_417 P08621 P08621|P08621-2|P08621-4 U1 small nuclear ribonucleoprotein 70 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32995.32995.3 14.18 14.18 1.133 4 1 1 0 1050.4285 3068.3049 S417s N428n TMT10 412 (R) DMYMEsEGGDGYLAPEnGYLMEAAPE (-) DMY(0.0)MES(0.99)EGGDGY(0.0)LAPEN(1.0)GY(0.0)LMEAAPE s:Phosphorylated S,n:Deamidated SNRNP70 51612.9 5 8 607.1 262.24 HUMAN 1 8.1812 13.5439 SRDRESRSPFLKPDE-p Q9H7N4;S874-p SRDRESRSPFLKPDE 0.86498769265803 0.176570213299207 0.0253333333333333 0.138666666666667 1.22430151085056 9.90459905151371 0.0253333333333333 0.138666666666667 0.754344709667402 0.102220992850525 0.329232872357821 1.96435487729343 Q9H7N4 SCAF1 Q9H7N4.S874.p_SCAF1 Q9H7N4_S874s _1_1_874_874 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12738.12738.5 16.74 12.83 1.207 3 1 1 0 592.1175 2876.5907 S874s TMT10 871 (R) ESRsPFLKPDERAPTEMAK (A) ES(0.0)RS(0.99)PFLKPDERAPT(0.0)EMAK K:TMT10,s:Phosphorylated S SCAF1 139895 12 17 76.1 647.25 HUMAN 1 1.2243 9.9046 SRDRFRRSETPPHWR-p Q13427;S356-p SRDRFRRSETPPHWR 0.236669622621405 0.171434619725209 0.205333333333333 0.206666666666667 11.9913294574076 10.0688398329645 0.205333333333333 0.206666666666667 0.0632218287796278 0.0984274007960789 2.33079676276367 1.99286072181251 Q13427 PPIG Q13427.S356.p_PPIG Q13427_S356sT358t_2_2_356_358 Q13427 Q13427|E9PG73 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4577.4783.3 14.38 14.38 99 2 2 2 0 442.511 1165.5861 S356s T358t Hydrogen 355 (R) RsEtPPHWR (Q) RS(1.0)ET(1.0)PPHWR s:Phosphorylated S,t:Phosphorylated T PPIG 89129.1 21 21 112.1 571.91 HUMAN 1 11.9913 10.0688 SRDRGKKSRSPVDLR-p Q13523;S292-p SRDRGKKSRSPVDLR 0.594226936638701 0.106284260548253 0.097 0.454666666666667 4.16820346591871 12.8615512501984 0.097 0.454666666666667 0.382983138138362 0.051742198172769 0.949148361072525 2.48480288799839 Q13523 PRPF4B Q13523.S292.p_PRPF4B Q13523_S292sS294s_2_2_292_294 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6843.6843.3 9.04 5.18 99 2 2 2 0 501.9139 1343.7957 S292s S294s Hydrogen 292 (K) sRsPVDLRGK (S) S(1.0)RS(1.0)PVDLRGK K:TMT10-Lys-Only,s:Phosphorylated S PRPF4B 117327.1 11 36 70.1 666.55 HUMAN 1 4.1682 12.8616 SRDRKKKSDANASYL-p Q12955;S39-p SRDRKKKSDANASYL 0.302096047363256 0.469730436815983 -0.163 -0.068 9.74114486195823 4.37366683198345 -0.163 -0.068 0.10614157160521 0.365286243161916 -1.93677151188309 -0.987736794373734 Q12955 ANK3 Q12955.S39.p_ANK3 Q12955_S39s _1_1_39_39 Q12955 Q12955|Q12955-4|Q12955-5|A0A087X0B4 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6029.6029.2 8.69 5.33 2.471 3 1 1 0 717.3545 1353.7324 S39s Hydrogen 38 (K) KsDANASYLR (A) KS(0.99)DANAS(0.0)Y(0.0)LR K:TMT10-Lys-Only,s:Phosphorylated S ANK3 482683.6 3 4 135.1 530.51 HUMAN 1 -9.7411 -4.3737 SRDRKPGSHASSSAR-p Q9H7N4;S564-p SRDRKPGSHASSSAR 0.0495429320354942 0.085512394335663 0.816333333333333 0.322333333333333 28.9047901247431 14.1349351097253 0.816333333333334 0.322333333333333 0.00128682943828521 0.0385928177912152 6.10570160670833 2.7160782022003 Q9H7N4 SCAF1 Q9H7N4.S564.p_SCAF1 Q9H7N4_S564s _1_1_564_564 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.1583.1583.3 7.79 7.79 1.316 4 1 1 0 465.2319 1313.7123 S564s Hydrogen 561 (R) KPGsHASSSAR (R) KPGS(0.99)HAS(0.0)S(0.0)S(0.0)AR K:TMT10-Lys-Only,s:Phosphorylated S SCAF1 139895 1 10 76.1 647.25 HUMAN 1 28.9048 14.1349 SRDSAAPSPIPGADN-p Q5T1M5;S311-p SRDSAAPSPIPGADN 0.790923786604566 0.731533270589755 -0.0516666666666667 -0.041 1.96670635927954 1.87103735160024 -0.0516666666666667 -0.041 0.635812942468942 0.649974419538527 -0.501416236117643 -0.479994632119844 Q5T1M5 FKBP15 Q5T1M5.S311.p_FKBP15 Q5T1M5_S311s _1_1_311_311 Q5T1M5 Q5T1M5|Q5T1M5-2|Q5T1M5-3 FK506-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30625.30625.4 18.96 18.96 2.208 6 1 1 0 847.1899 3305.7669 S311s TMT10 306 (R) DSAAPsPIPGADNLSADPVVSPPTSIPFK (S) DS(0.0)AAPS(0.99)PIPGADNLS(0.0)ADPVVS(0.0)PPT(0.0)S(0.0)IPFK K:TMT10,s:Phosphorylated S FKBP15 134140.9 21 3 173.1 487.64 HUMAN 1 -1.9667 -1.871 SRDSGRLSPDLSVCG-p Q8TF76;S147-p SRDSGRLSPDLSVCG 0.605173265345025 0.170090798419683 0.0753333333333333 -0.200333333333333 4.03010528906702 10.1159428292602 0.0753333333333334 -0.200333333333333 0.39535703503316 0.0973656386975216 0.922879897422723 -2.00104128902327 Q8TF76 GSG2 Q8TF76.S147.p_GSG2 Q8TF76_S147s _1_1_147_147 Q8TF76 Q8TF76|Q8TF76-2 Serine/threonine-protein kinase haspin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12458.12458.3 14.4 14.4 1.669 3 1 1 0 684.9969 1973.0072 S147s TMT10 142 (R) DSGRLsPDLSVCGQPR (D) DS(0.0)GRLS(0.99)PDLS(0.0)VCGQPR C:Carbamidomethylation,s:Phosphorylated S HASPIN 89692 2 4 2452.1 82.86 HUMAN 1 4.0301 -10.1159 SRDTGHLTDSECNQK-p Q70EL1;T442-p SRDTGHLTDSECNQK 0.254996768567997 0.946222530358243 -0.192333333333333 -0.0083333333333333 11.2883865943855 0.342880201709689 -0.192333333333333 -0.00833333333333332 0.0743295221061921 0.924085125782257 -2.20671141632653 -0.0998055497383394 Q70EL1 USP54 Q70EL1.T442.p_USP54 Q70EL1_T442t _1_1_442_442 Q70EL1 Q70EL1|Q70EL1-7|Q70EL1-6 Inactive ubiquitin carboxyl-terminal hydrolase 54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6618.6618.3 15.04 15.04 2.31 3 1 1 0 681.647 1962.9591 T442t TMT10 437 (R) DTGHLtDSECNQK (H) DT(0.0)GHLT(0.99)DS(0.0)ECNQK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T USP54 189724.2 1 2 525.1 282.54 HUMAN 1 -11.2884 -0.3429 SRDVDDGSGSPHSPH-p Q9H4A3-7;S2440-p SRDVDDGSGSPHSPH 0.766784644972732 0.138881378491189 0.0736666666666667 0.18 2.20888747050481 11.2945353267528 0.0736666666666667 0.18 0.601327759515776 0.074224360982264 0.554580348938626 2.20676630242812 Q9H4A3 WNK1 Q9H4A3.7.S2440.p_WNK1 Q9H4A3-7_S2440sS2442sS2445s_3_3_2440_2445 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2|F5GWT4|Q9H4A3-4 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6766.6766.3 11.01 11.01 11.013 5 3 3 0 773.6368 2078.994 S2440s S2442s S2445s Hydrogen 2435 (R) DVDDGsGsPHsPHQLSSK (S) DVDDGS(0.99)GS(0.99)PHS(0.99)PHQLS(0.0)S(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S WNK1 301202.7 9 31 162.1 495.27 HUMAN 1 2.2089 11.2945 SREATGLSPQAAQEK-p P17029;S13-p SREATGLSPQAAQEK 0.528989375338074 0.0335026955542322 0.169666666666667 0.385 5.11742608280089 19.8836527672596 0.169666666666667 0.385 0.307792045412462 0.0102715201692966 1.12553414574047 3.85044907676411 P17029 ZKSCAN1 P17029.S13.p_ZKSCAN1 P17029_S13s _1_1_13_13 P17029 P17029 Zinc finger protein with KRAB and SCAN domains 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11651.11862.2 17.58 17.58 4.028 2 1 1 0 934.482 1787.9903 S13s TMT10 8 (R) EATGLsPQAAQEK (D) EAT(0.0)GLS(0.99)PQAAQEK K:TMT10,s:Phosphorylated S ZKSCAN1 64598.8 4 1 2843.1 68.21 HUMAN 1 5.1174 19.8837 SREICLQSQSKDKST-p Q9NQW6;S356-p SREICLQSQSKDKST 0.274349481664046 0.0125994963231798 -0.155666666666667 -0.621666666666667 10.6298334419568 26.490494557817 -0.155666666666667 -0.621666666666667 0.086500109214828 0.00224362641370638 -2.09137871016022 -5.42414897408264 Q9NQW6 ANLN Q9NQW6.S356.p_ANLN Q9NQW6_S356s _1_1_356_356 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13371.13371.2 11.96 11.96 2.237 2 1 1 0 815.9185 1550.8612 S356s TMT10 351 (R) EICLQsQSK (D) EICLQS(0.99)QS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANLN 125566 2 24 68.1 675.08 HUMAN 1 -10.6298 -26.4905 SREIDCLSPEAQKLA-p Q32MZ4-2;S16-p SREIDCLSPEAQKLA 0.260386657049657 0.00256376979859587 -0.176 -0.778333333333333 11.0779209052072 39.5776192333745 -0.176 -0.778333333333333 0.0780203527396649 0.00011021433298742 -2.16976606830921 -9.94299104563858 Q32MZ4 LRRFIP1 Q32MZ4.2.S16.p_LRRFIP1 Q32MZ4-2_S16s _1_1_16_16 Q32MZ4-2 Q32MZ4|Q32MZ4-2|Q32MZ4-3 Isoform 2 of Leucine-rich repeat flightless-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15249.15249.2 14.99 10.19 99 1 1 1 0 914.4517 1747.9301 S16s TMT10 11 (R) EIDCLsPEAQK (L) EIDCLS(1.0)PEAQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LRRFIP1 87029.9 2 2 235.1 419.93 HUMAN 1 -11.0779 -39.5776 SREMEKGSPSLRH__-p Q9P2M4;S688-p SREMEKGSPSLRH__ 0.142827912098432 0.0117297467150433 0.617333333333333 -0.480666666666667 17.2629107968013 26.9930840631637 0.617333333333333 -0.480666666666667 0.0187805765353551 0.00199844220828319 3.31459804612016 -5.55925850477104 Q9P2M4 TBC1D14 Q9P2M4.S688.p_TBC1D14 Q9P2M4_S688s _1_1_688_688 Q9P2M4 Q9P2M4 TBC1 domain family member 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6443.6443.4 9.43 9.43 9.433 2 1 1 0 452.9839 1728.9467 S688s TMT10 683 (R) EMEKGsPSLRH (-) EMEKGS(0.99)PS(0.0)LRH K:TMT10,s:Phosphorylated S TBC1D14 78877.4 1 4 4308.1 33.92 HUMAN 1 17.2629 -26.9931 SRETSHGSPTVTKLS-p Q8NI08-2;S373-p SRETSHGSPTVTKLS 0.613150431981527 0.0305140104862788 -0.0963333333333334 -0.298 3.94017149441214 20.4792410264561 -0.0963333333333334 -0.298 0.403629454113775 0.00895521253274118 -0.905675944938462 -3.97872641814432 Q8NI08 NCOA7 Q8NI08.2.S373.p_NCOA7 Q8NI08-2_S373s _1_1_373_373 Q8NI08-2 Q8NI08|Q8NI08-2|Q8NI08-7 Isoform 2 of Nuclear receptor coactivator 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5439.5439.3 16.16 16.16 1.567 5 1 1 0 561.2905 1601.8899 S373s TMT10 368 (R) ETSHGsPTVTK (L) ET(0.0)S(0.0)HGS(0.99)PT(0.0)VT(0.0)K K:TMT10,s:Phosphorylated S NCOA7 105415.6 1 6 906.1 202.52 HUMAN 1 -3.9402 -20.4792 SREVRHGSDPAFAPG-p Q6ZRV2;S523-p SREVRHGSDPAFAPG 0.790053523868569 0.0430524791563996 0.0396666666666667 0.303666666666667 1.97447802256181 18.3020244347146 0.0396666666666667 0.303666666666667 0.634676177966473 0.0147841907234663 0.503142568270829 3.52070568809798 Q6ZRV2 FAM83H Q6ZRV2.S523.p_FAM83H Q6ZRV2_S523s _1_1_523_523 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7392.7392.3 19.27 19.27 99 1 1 1 0 506.575 1437.7436 S523s TMT10 521 (R) HGsDPAFAPGPR (G) HGS(1.0)DPAFAPGPR s:Phosphorylated S FAM83H 127633.5 9 8 7.1 1347.23 HUMAN 1 1.9745 18.302 SREYDQLYEEYTRTS-p O00459;Y464-p SREYDQLYEEYTRTS 0.623641351546939 0.145985630962389 -0.119666666666667 -0.201666666666667 3.8102987285054 11.0078179648767 -0.119666666666667 -0.201666666666667 0.415882003157925 0.0792899608677073 -0.880689820509107 -2.15650601301388 O00459 PIK3R2 O00459.Y464.p_PIK3R2 O00459_Y464y _1_1_464_464 O00459 O00459|E9PFP1 Phosphatidylinositol 3-kinase regulatory subunit beta GG20160819_MSz_CCLE_T4D7_pY_Injection_02.14498.14498.3 16.59 12.94 5.619 5 1 1 0 687.6439 1980.9501 Y464y TMT10 457 (K) SREYDQLyEEYTR (T) S(0.0)REY(0.0)DQLY(0.99)EEY(0.0)T(0.0)R y:Phosphorylated Y PIK3R2 81886.1 2 4 75.1 33.18 HUMAN 1 -3.8103 -11.0078 SREYDRLYEEYTRTS-p P27986-4;Y467-p SREYDRLYEEYTRTS 0.631521203791749 0.0301337338809123 -0.086 -0.284666666666667 3.71637496086409 20.5782925968361 -0.086 -0.284666666666667 0.424974140204668 0.00875327837571263 -0.86251071042007 -4.00028987812611 P27986 PIK3R1 P27986.4.Y467.p_PIK3R1 P27986-4_Y467y _1_1_467_467 P27986-4 P27986-4|F6TDL0|Q92569|P27986-2|P27986-3|Q92569-2|Q92569-3|P27986-5 Isoform 4 of Phosphatidylinositol 3-kinase regulatory subunit alpha GG20160819_MSz_CCLE_T4D7_pY_Injection_01.10544.10544.3 20.28 20.28 7.575 4 1 1 0 539.5592 1536.6965 Y467y Hydrogen 462 (R) EYDRLyEEYTR (T) EY(0.0)DRLY(0.99)EEY(0.0)T(0.0)R y:Phosphorylated Y PIK3R1 84872.2 9 4 9.1 106.64 HUMAN 1 -3.7164 -20.5783 SRFEFNQSLGQPEKI-p Q96RU2;S375-p SRFEFNQSLGQPEKI 0.147946322560902 0.814622537121521 -0.473 0.0236666666666667 16.8410796708252 1.24601659885934 -0.473 0.0236666666666667 0.0206962676858998 0.750582336837591 -3.23139925936693 0.334465303451818 Q96RU2 USP28 Q96RU2.S375.p_USP28 Q96RU2_S375s _1_1_375_375 Q96RU2 Q96RU2|Q96RU2-2|B4E3L3|G3V1N5|Q96RU2-3 Ubiquitin carboxyl-terminal hydrolase 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22385.22385.2 11.26 11.26 99 1 1 1 0 981.4929 1882.0111 S375s TMT10 370 (R) FEFNQsLGQPEK (I) FEFNQS(1.0)LGQPEK K:TMT10,s:Phosphorylated S USP28 123630 3 3 1212.1 166.18 HUMAN 1 -16.8411 1.246 SRFEPPQSDSDGQRR-p O15042;S236-p SRFEPPQSDSDGQRR 0.299435467422777 0.0833872115874586 0.181666666666667 0.191333333333333 9.84728894614342 14.2818738399361 0.181666666666667 0.191333333333333 0.103578854888713 0.0373089147187468 1.95519114413642 2.74313355965226 O15042 U2SURP O15042.S236.p_U2SURP O15042_S236s _1_1_236_236 O15042 O15042|O15042-2|E7ET15|E7EW00 U2 snRNP-associated SURP motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7548.7548.3 12.73 8.74 2.727 2 1 1 0 609.9462 1747.8561 S236s TMT10 231 (R) FEPPQsDSDGQRR (S) FEPPQS(0.99)DS(0.0)DGQRR s:Phosphorylated S U2SURP 118746.2 3 7 360.1 345.29 HUMAN 1 9.8473 14.2819 SRFGPYESYDSRSSL-p Q5BKZ1;S76-p SRFGPYESYDSRSSL 0.424243092941049 0.665566676050702 -0.215333333333333 -0.0963333333333333 6.86364859355569 2.42014594863879 -0.215333333333333 -0.0963333333333333 0.205889946445217 0.572776781973968 -1.43712387374369 -0.599884048881303 Q5BKZ1 ZNF326 Q5BKZ1.S76.p_ZNF326 Q5BKZ1_S76s _1_1_76_76 Q5BKZ1 Q5BKZ1 DBIRD complex subunit ZNF326 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15292.15292.2 9.92 3.47 2.499 4 1 1 0 765.3291 1449.6848 S76s TMT10 71 (R) FGPYEsYDSR (S) FGPY(0.0)ES(0.99)Y(0.0)DS(0.0)R s:Phosphorylated S ZNF326 65995 1 2 1326.1 153.85 HUMAN 1 -6.8636 -2.4201 SRFIGSISPLNPQPR-p Q7Z591;S316-p SRFIGSISPLNPQPR 0.742064302896928 0.920128551929706 -0.0513333333333333 -0.0136666666666667 2.46144662987885 0.509875694620635 -0.0513333333333334 -0.0136666666666667 0.567355588441585 0.889226569266787 -0.60873023327473 -0.1459593121555 Q7Z591 AKNA Q7Z591.S316.p_AKNA Q7Z591_S316s _1_1_316_316 Q7Z591 Q7Z591|Q7Z591-2|Q7Z591-7|Q7Z591-3|Q7Z591-6 AT-hook-containing transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21298.21298.3 15.91 15.91 1.345 3 1 1 0 697.0432 2009.1494 S316s TMT10 311 (R) FIGSIsPLNPQPRPTR (Q) FIGS(0.0)IS(0.99)PLNPQPRPT(0.0)R s:Phosphorylated S AKNA 155935.2 1 4 737.1 234.85 HUMAN 1 -2.4614 -0.5099 SRFLETDSEEEQEEV-p Q76FK4;S890-p SRFLETDSEEEQEEV 0.885516381858748 0.00256976164636574 -0.0356666666666667 0.74 1.04317503134594 39.5590250462946 -0.0356666666666667 0.74 0.786470608122217 0.000110687223937265 -0.284673639632379 9.93477235887948 Q76FK4 NOL8 Q76FK4.S890.p_NOL8 Q76FK4_S890s _1_1_890_890 Q76FK4 Q76FK4|Q76FK4-4|Q76FK4-2|F5H101 Nucleolar protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17447.17447.3 19.88 19.88 2.389 2 1 1 0 950.7999 2770.4238 S890s TMT10 885 (R) FLETDsEEEQEEVNEKK (T) FLET(0.0)DS(0.99)EEEQEEVNEKK K:TMT10,s:Phosphorylated S NOL8 132527 4 6 605.1 262.45 HUMAN 1 -1.0432 39.559 SRFLRSWTWPQTAGR-p P82912;T16-p SRFLRSWTWPQTAGR 0.0750306974350764 0.00352917669002825 -0.403 -0.626333333333333 24.0898849357058 36.622140916937 -0.403 -0.626333333333333 0.00389952318144185 0.000217663650365053 -4.81690455783433 -8.71100320874064 P82912 MRPS11 P82912.T16.p_MRPS11 P82912_T16t _1_1_16_16 P82912 P82912|P82912-3|H0YL99 28S ribosomal protein S11, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19922.20127.2 9.5 9.5 2.523 3 1 1 0 749.8563 1418.7378 T16t TMT10 14 (R) SWtWPQTAGR (V) S(0.0)WT(0.99)WPQT(0.0)AGR t:Phosphorylated T MRPS11 20786.6 1 1 6121.1 13.81 HUMAN 1 -24.0899 -36.6221 SRFNRRVSVCAETYN-p P13861;S99-p SRFNRRVSVCAETYN 0.391178814803887 0.116971307587921 0.116 0.169 7.52749750408854 12.2890297506033 0.116 0.169 0.17670557419722 0.0590332950650761 1.55306890050599 2.38248520727457 P13861 PRKAR2A P13861.S99.p_PRKAR2A P13861_S99s _1_1_99_99 P13861 P13861|P13861-2 cAMP-dependent protein kinase type II-alpha regulatory subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13571.13571.4 23.19 17.3 2.05 4 1 1 0 906.6829 3543.7426 S99s TMT10 97 (R) RVsVCAETYNPDEEEEDTDPRVIHPK (T) RVS(0.99)VCAET(0.0)Y(0.0)NPDEEEEDT(0.0)DPRVIHPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PRKAR2A 45859.9 18 3 1121.1 175.11 HUMAN 1 7.5275 12.289 SRFQLGGSARGSRVL-p Q9H3H3-2;S276-p SRFQLGGSARGSRVL 0.0515638782216539 0.25877210657368 -0.441666666666667 0.144333333333333 28.1916369306873 7.73498190834307 -0.441131005793594 0.144333333333333 0.00151647867279995 0.168461944447629 -5.90024402691517 1.5886645267361 Q9H3H3 C11orf68 Q9H3H3.2.S276.p_C11orf68 Q9H3H3-2_S276s _1_1_276_276 Q9H3H3-2 Q9H3H3-3|Q9H3H3-2 Isoform 2 of UPF0696 protein C11orf68 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13874.13874.2 10.72 1.38 99 1 1 1 0 572.789 1064.605 S276s TMT10 271 (R) FQLGGsAR (G) FQLGGS(1.0)AR s:Phosphorylated S C11orf68 31600.8 2 3 3337.1 53.52 HUMAN 1 -28.1916 7.735 SRFSRWFSNPSRSGS-p Q9NRA8;S342-p SRFSRWFSNPSRSGS 0.763926753472663 0.0354974704310202 -0.0423333333333333 0.260666666666667 2.24320200835067 19.5138504513385 -0.0423333333333333 0.260666666666667 0.596595260867798 0.0111844583059326 -0.562011785080036 3.7719648988635 Q9NRA8 EIF4ENIF1 Q9NRA8.S342.p_EIF4ENIF1 Q9NRA8_S342s _1_1_342_342 Q9NRA8 Q9NRA8-3 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16042.16042.2 7.41 7.41 2.551 2 1 1 0 601.7821 1122.5894 S342s TMT10 340 (R) WFsNPSR (S) WFS(0.99)NPS(0.0)R s:Phosphorylated S EIF4ENIF1 108541.3 1 8 150.1 511.59 HUMAN 1 -2.2432 19.5139 SRGGARASPATQPPP-p Q07666;S58-p SRGGARASPATQPPP 0.681920528763249 0.0265747171482219 0.0553333333333333 0.352666666666667 3.11710900583509 21.3863557948027 0.0553333333333333 0.352666666666667 0.487853134163775 0.00726715495363795 0.744099720668162 4.17873660010276 Q07666 KHDRBS1 Q07666.S58.p_KHDRBS1 Q07666_S58s _1_1_58_58 Q07666 Q07666|Q07666-3 KH domain-containing, RNA-binding, signal transduction-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32063.32063.4 27.07 22.38 2.15 9 1 1 0 1067.0775 4185.3211 S58s TMT10 57 (R) AsPATQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVK (M) AS(0.99)PAT(0.0)QPPPLLPPS(0.0)AT(0.0)GPDAT(0.0)VGGPAPT(0.0)PLLPPS(0.0)AT(0.0)AS(0.0)VK K:TMT10,s:Phosphorylated S KHDRBS1 48340.6 23 4 1739.1 118.29 HUMAN 1 3.1171 21.3864 SRGGDAKSPVLQEKG-p A6NFI3;S112-p SRGGDAKSPVLQEKG 0.390532605380697 0.0974111249010791 -0.116 0.188333333333333 7.5466188105163 13.3732263859899 -0.116 0.188333333333333 0.17592927741666 0.0459914774648442 -1.55639667061379 2.57708011037989 A6NFI3 ZNF316 A6NFI3.S112.p_ZNF316 A6NFI3_S112s _1_1_112_112 A6NFI3 A6NFI3 Zinc finger protein 316 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10612.10612.2 12.74 12.74 99 1 1 1 0 998.5569 1916.142 S112s TMT10 107 (R) GGDAKsPVLQEK (G) GGDAKS(1.0)PVLQEK K:TMT10,s:Phosphorylated S ZNF316 110489.2 9 2 3538.1 48.78 HUMAN 1 -7.5466 13.3732 SRGGGAFSGGEDASE-p P36776;S80-p SRGGGAFSGGEDASE 0.96543844430701 0.0250968419610556 0.00666666666666666 0.513 0.294369453512452 21.7765950591076 0.00666666666666666 0.513 0.934465032166501 0.00664263660045418 0.0861237885203648 4.2665756122992 P36776 LONP1 P36776.S80.p_LONP1 P36776_S80s _1_1_80_80 P36776 P36776 Lon protease homolog, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.37111.37111.5 27.17 27.17 2.128 7 1 1 0 1112.1451 5476.7168 S80s TMT10 75 (R) GGGAFsGGEDASEGGAEEGAGGAGGSAGAGEGPVITALTPMTIPDVFPHLPLIAITR (N) GGGAFS(0.99)GGEDAS(0.0)EGGAEEGAGGAGGS(0.0)AGAGEGPVIT(0.0)ALT(0.0)PMT(0.0)IPDVFPHLPLIAIT(0.0)R s:Phosphorylated S LONP1 107000.9 1 1 4020.1 38.99 HUMAN 1 0.2944 21.7766 SRGGRGPSPLAGPSA-p A0A087X263;S21-p SRGGRGPSPLAGPSA 0.482938604240433 0.264520058399026 0.134333333333333 0.114666666666667 5.82086918880256 7.60720874349475 0.134333333333333 0.114666666666667 0.261765906243171 0.173491869006977 1.25258640381517 1.56646678208809 A0A087X263 MAGIX A0A087X263.S21.p_MAGIX A0A087X263_S21s _1_1_21_21 A0A087X263 A0A075B7A2|A0A087WUY6|A0A087X263 PDZ domain-containing protein MAGIX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5874.5874.3 8.87 8.87 1.395 2 1 1 0 530.2774 1508.8495 S21s TMT10 16 (R) GGRGPsPLAGPSAR (Q) GGRGPS(0.99)PLAGPS(0.0)AR s:Phosphorylated S MAGIX 26728.6 1 1 5265.1 21.22 HUMAN 1 5.8209 7.6072 SRGHPAASPALPRLS-p P35408;S245-p SRGHPAASPALPRLS 0.302068454531195 0.415569172475042 0.164 0.164333333333333 9.74239193898619 5.07302686534079 0.164 0.164333333333333 0.106111097418124 0.310954834620719 1.93698786529683 1.1171953734371 P35408 PTGER4 P35408.S245.p_PTGER4 P35408_S245s _1_1_245_245 P35408 P35408 Prostaglandin E2 receptor EP4 subtype HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6300.6300.3 10.71 10.71 99 1 1 1 0 461.5766 1302.748 S245s TMT10 240 (R) GHPAAsPALPR (L) GHPAAS(1.0)PALPR s:Phosphorylated S PTGER4 53860.3 1 1 3930.1 40.55 HUMAN 1 9.7424 5.073 SRGLGPPSPPAPPRG-p Q13425;S95-p SRGLGPPSPPAPPRG 0.283177951218012 0.391923390661678 0.152333333333333 0.0886666666666667 10.3534314345705 5.40910700345884 0.152333333333333 0.0886666666666667 0.0921842775676065 0.287799012638022 2.04318608064436 1.178273843819 Q13425 SNTB2 Q13425.S95.p_SNTB2 Q13425_S95s _1_1_95_95 Q13425 Q13425|Q13425-2 Beta-2-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12859.12859.4 21.03 21.03 10.669 2 1 1 0 689.3662 2674.4739 S95s TMT10 90 (R) GLGPPsPPAPPRGPAGEAGASPPVRR (V) GLGPPS(0.99)PPAPPRGPAGEAGAS(0.0)PPVRR s:Phosphorylated S SNTB2 58405 13 3 637.1 255.93 HUMAN 1 10.3534 5.4091 SRGLLNKSIGSLLEN-p Q9UGU0;S807-p SRGLLNKSIGSLLEN 0.376450887441092 0.0824846851295459 -0.139333333333333 -0.243666666666667 7.84803195933326 14.3542529944538 -0.139333333333333 -0.243666666666667 0.164133338823559 0.0366922801344091 -1.60878670642715 -2.7564906332913 Q9UGU0 TCF20 Q9UGU0.S807.p_TCF20 Q9UGU0_S807s _1_1_807_807 Q9UGU0 Q9UGU0|Q9UGU0-2 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29455.29455.3 10.64 10.64 1.186 2 1 1 0 729.6926 2107.0922 S807s TMT10 807 (K) sIGSLLENPHWGPWER (K) S(0.99)IGS(0.0)LLENPHWGPWER s:Phosphorylated S TCF20 213250.7 1 12 197.1 457.96 HUMAN 1 -7.848 -14.3543 SRGPSPVSLGNQDTL-p Q0JRZ9;S536-p SRGPSPVSLGNQDTL 0.172323036873072 0.15805936754387 0.764666666666667 1.15133333333333 15.20737758546 10.5389194110302 0.764666666666667 1.15133333333333 0.0301482592684794 0.0883299651109571 2.91743626438963 2.07462439549149 Q0JRZ9 FCHO2 Q0JRZ9.S536.p_FCHO2 Q0JRZ9_S536s_1_1_536_536 Q0JRZ9 Q0JRZ9|Q0JRZ9-3 F-BAR domain only protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.38553.38553.4 7.86 4.7 1.147 6 1 1 0 796.9099 3103.6513 S536s N539n Hydrogen 531 (R) GPSPVsLGnQDTLPVAVALTESVNAYFK (G) GPS(0.0)PVS(0.99)LGN(0.99)QDT(0.0)LPVAVALT(0.0)ES(0.0)VN(0.0)AY(0.0)FK K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated FCHO2 89436.3 1 10 864.1 210.2 HUMAN 1 15.2074 10.5389 SRGQKAKSMEGFQDL-p Q9UHW9;S1064-p SRGQKAKSMEGFQDL 0.299327491242072 0.217727741419475 -0.157666666666667 -0.158333333333333 9.85065277952027 8.71300242486709 -0.157666666666667 -0.158333333333333 0.103498658818258 0.134493023675112 -1.95577505098527 -1.75807269213418 Q9UHW9 SLC12A6 Q9UHW9.S1064.p_SLC12A6 Q9UHW9_S1064s _1_1_1064_1064 Q9UHW9 Q9UHW9 Solute carrier family 12 member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21117.21117.5 9.85 9.85 7.432 2 1 1 0 626.919 3050.6028 S1064s TMT10 1062 (K) AKsMEGFQDLLNMRPDQSNVRR (M) AKS(0.99)MEGFQDLLNMRPDQS(0.0)NVRR K:TMT10,s:Phosphorylated S SLC12A6 128698.7 1 15 1247.3 162.14 HUMAN 1 -9.8507 -8.713 SRGQLERSPSGSAFG-p Q96N67-6;S1421-p SRGQLERSPSGSAFG 0.330990249170453 0.579653169230169 0.237 0.056 8.97328529002613 3.19610106910982 0.237 0.056 0.126669329295134 0.479059981178656 1.80373829664144 0.759858091712743 Q96N67 DOCK7 Q96N67.6.S1421.p_DOCK7 Q96N67-6_S1421s _1_1_1421_1421 Q96N67-6 Q96N67-6|Q96N67-2|Q96N67-3|Q96N67-4 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10894.10894.3 16.75 11.63 1.374 4 1 1 0 777.0427 2249.1472 S1421s TMT10 1416 (R) GQLERsPSGSAFGSQENLR (W) GQLERS(0.99)PS(0.0)GS(0.0)AFGS(0.0)QENLR s:Phosphorylated S DOCK7 243551.1 2 19 345.1 352.4 HUMAN 1 8.9733 3.1961 SRGQTPLTEGSEDLD-p Q86VR2;T310-p SRGQTPLTEGSEDLD 0.866081613861063 0.14697499294426 -0.0313333333333333 0.210333333333333 1.21487718105468 10.9661896307624 -0.0313333333333333 0.210333333333333 0.755983439329374 0.0800536313477248 -0.326942301468418 2.14922157661032 Q86VR2 FAM134C Q86VR2.T310.p_FAM134C Q86VR2_T310tS313sS320s_3_3_310_320 Q86VR2 Q86VR2|K7EQI9|Q86VR2-2 Reticulophagy regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18199.18827.3 17.25 17.25 2.848 5 3 3 0 1015.0675 2803.2856 T310t S313s S320s TMT10 305 (R) GQTPLtEGsEDLDGHsDPEESFAR (D) GQT(0.0)PLT(0.99)EGS(0.99)EDLDGHS(0.99)DPEES(0.0)FAR t:Phosphorylated T,s:Phosphorylated S RETREG3 51794.7 5 14 1136.1 173.56 HUMAN 1 -1.2149 10.9662 SRGRLRLSCLDLEQC-p Q9UDY8;S70-p SRGRLRLSCLDLEQC 0.116602871314905 0.0731905471739126 -0.303 -0.209 19.4186652356643 15.0806390186193 -0.303 -0.209 0.0114322964196706 0.0310410281846662 -3.75528545476221 -2.89168941053175 Q9UDY8 MALT1 Q9UDY8.S70.p_MALT1 Q9UDY8_S70s _1_1_70_70 Q9UDY8 Q9UDY8|Q9UDY8-2 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25804.25804.3 14.58 10.78 7.861 2 1 1 0 758.3996 2193.2136 S70s TMT10 67 (R) LRLsCLDLEQCSLK (V) LRLS(0.99)CLDLEQCS(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MALT1 93811.2 1 1 3959.1 40.27 HUMAN 1 -19.4187 -15.0806 SRGRYLGSALELRAL-p Q8WY41;S125-p SRGRYLGSALELRAL 0.661628042811179 0.0654044636391875 -0.0636666666666667 -0.207333333333333 3.35927910047869 15.7603461630193 -0.0636666666666667 -0.207333333333333 0.461394156519331 0.0265439397981338 -0.79248723549903 -3.02021372499757 Q8WY41 NANOS1 Q8WY41.S125.p_NANOS1 Q8WY41_S125s _1_1_125_125 Q8WY41 Q8WY41 Nanos homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23656.23656.2 9.57 5.33 8.039 2 1 1 0 665.8533 1250.7306 S125s TMT10 122 (R) YLGsALELR (A) Y(0.0)LGS(0.99)ALELR s:Phosphorylated S NANOS1 30857.3 1 2 4844.1 25.96 HUMAN 1 -3.3593 -15.7603 SRGSLSLSFEREPST-p P57078;S438-p SRGSLSLSFEREPST 0.278656842374099 0.803586709210602 -0.162 0.034 10.4927335499971 1.32927795852176 -0.162 0.034 0.0892743393498962 0.736329506660438 -2.06746048485979 0.354513529878536 P57078 NotFound P57078.S438.p_NotFound P57078_S438s _1_1_438_438 P57078 P57078|P57078-2 Receptor-interacting serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21137.21137.3 11.61 7.78 1.118 8 1 1 0 998.1646 2912.5253 S438s TMT10 433 (R) GSLSLsFEREPSTSDLGTTDVQK (K) GS(0.0)LS(0.0)LS(0.99)FEREPS(0.0)T(0.0)S(0.0)DLGT(0.0)T(0.0)DVQK K:TMT10,s:Phosphorylated S RIPK4 92350.8 2 5 2665.1 74.56 HUMAN 1 -10.4927 1.3293 SRGSPRYSPRHSRSR-p J3KTL2;S238-p SRGSPRYSPRHSRSR 0.374814805489608 0.0949722870567019 0.183333333333333 0.231333333333333 7.89063781887624 13.5217934113597 0.183333333333333 0.231333333333333 0.162531003994973 0.0444447695681307 1.61618330868485 2.60403231095052 J3KTL2 NotFound J3KTL2.S238.p_NotFound J3KTL2_S238s _1_1_238_238 J3KTL2 J3KTL2 Serine/arginine-rich-splicing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3928.3928.3 7.85 3.96 3.71 3 1 1 0 410.2071 1148.6374 S238s TMT10 233 (R) GSPRYsPR (H) GS(0.0)PRY(0.0)S(0.99)PR s:Phosphorylated S SRSF1 28442.8 2 92 8.5 1346.57 HUMAN 1 7.8906 13.5218 SRGSSRYSSTETLKD-p Q96PE2;S394-p SRGSSRYSSTETLKD 0.609681109698794 0.341382972206259 0.134666666666667 -0.115666666666667 3.98075853062683 6.18196048096646 0.134666666666667 -0.115666666666667 0.399874902258339 0.240881780088939 0.913449803700816 -1.31659212857407 Q96PE2 ARHGEF17 Q96PE2.S394.p_ARHGEF17 Q96PE2_S394sS395s_2_2_394_395 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17189.17189.4 8.02 8.02 1.463 9 2 2 0 727.8333 2748.3841 S394s S395s TMT10 389 (R) GSSRYssTETLKDDDLWSSR (G) GS(0.0)S(0.0)RY(0.0)S(0.99)S(0.99)T(0.0)ET(0.0)LKDDDLWS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S ARHGEF17 223779.6 1 43 30.1 908.19 HUMAN 1 3.9808 -6.182 SRGTLSDSEIETNSA-p Q8WXG6;S1241-p SRGTLSDSEIETNSA 0.39252045780296 0.83187906681382 0.125333333333333 0.0236666666666667 7.48983463423393 1.11845129074377 0.125333333333333 0.0236666666666667 0.178244663615334 0.772956174820099 1.54651262077621 0.3033019691284 Q8WXG6 MADD Q8WXG6.S1241.p_MADD Q8WXG6_S1239sS1241s_2_2_1239_1241 Q8WXG6 Q8WXG6|Q8WXG6-2|A0A0A0MRB5|Q8WXG6-3|Q8WXG6-7|Q8WXG6-4|Q8WXG6-5|Q8WXG6-8|Q8WXG6-6|F8W8U2 MAP kinase-activating death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27689.27689.3 12.7 8.11 1.409 8 2 2 0 892.7554 2516.3132 S1239s S1241s TMT10 1236 (R) GTLsDsEIETNSATSTIFGK (A) GT(0.0)LS(0.99)DS(0.99)EIET(0.0)NS(0.0)AT(0.0)S(0.0)T(0.0)IFGK K:TMT10,s:Phosphorylated S MADD 184612.2 1 14 546.1 275.73 HUMAN 1 7.4898 1.1185 SRGWLPKSPTKGEDW-p Q4KWH8;S1318-p SRGWLPKSPTKGEDW 0.476079193431219 0.00182687357791697 -0.157333333333333 -0.810333333333333 5.93397209051288 43.1002245349975 -0.157333333333333 -0.810333333333333 0.255036764989744 4.89753497922341e-05 -1.27279232070042 -11.6176963127433 Q4KWH8 PLCH1 Q4KWH8.S1318.p_PLCH1 Q4KWH8_S1318s _1_1_1318_1318 Q4KWH8 Q4KWH8|Q4KWH8-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22686.22686.3 8.83 8.83 1.586 3 1 1 0 990.223 2888.6692 S1318s TMT10 1313 (R) GWLPKsPTKGEDWETLK (S) GWLPKS(0.99)PT(0.0)KGEDWET(0.0)LK K:TMT10,s:Phosphorylated S PLCH1 191330.6 5 13 201.1 451.38 HUMAN 1 -5.934 -43.1002 SRHAIMRSPQMVSAI-p P35222;S191-p SRHAIMRSPQMVSAI 0.384780498587345 0.011359728184175 0.126333333333333 0.445333333333333 7.67785745476221 27.2222338510407 0.126333333333333 0.445333333333333 0.170692427409826 0.00189573057632618 1.57922247685833 5.62168307638979 P35222 CTNNB1 P35222.S191.p_CTNNB1 P35222_S191s _1_1_191_191 P35222 P35222|B4DGU4 Catenin beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14608.14608.4 16.7 16.7 7.613 2 1 1 0 502.0167 1925.0775 S191s TMT10 186 (R) HAIMRsPQMVSAIVR (T) HAIMRS(0.99)PQMVS(0.0)AIVR s:Phosphorylated S CTNNB1 86122.7 11 2 956.1 195.35 HUMAN 1 7.6779 27.2222 SRHGKLFSPSKEAEL-p Q96RY5;S848-p SRHGKLFSPSKEAEL 0.126572282263763 0.00190404013065414 1.57033333333333 -1.26166666666667 18.6230393862991 42.6518435632743 1.57033333333333 -1.26166666666667 0.0137308069562557 5.43019772767467e-05 3.58947241910162 -11.3909138603741 Q96RY5 CRAMP1 Q96RY5.S848.p_CRAMP1 Q96RY5_S848s _1_1_848_848 Q96RY5 Q96RY5 Protein cramped-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24880.24880.3 14.45 8.75 2.544 3 1 1 0 688.3723 1983.1315 S848s TMT10 846 (K) LFsPSKEAELTFR (Q) LFS(0.99)PS(0.0)KEAELT(0.0)FR K:TMT10,s:Phosphorylated S CRAMP1 135914.1 1 9 647.1 254.68 HUMAN 1 18.623 -42.6518 SRHLSVSSQNPGRSS-p Q99759;S169-p SRHLSVSSQNPGRSS 0.134264480831341 0.050454433623152 0.271666666666667 0.251666666666667 17.932279404376 17.3291349287515 0.271666666666667 0.251666666666667 0.016098005059901 0.0184963701151295 3.44857291637545 3.32514922023016 Q99759 MAP3K3 Q99759.S169.p_MAP3K3 Q99759_S169s _1_1_169_169 Q99759 J3QRB6|Q99759|J3KRN4|Q99759-2 Mitogen-activated protein kinase kinase kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9275.9275.4 9.38 9.38 1.219 6 1 1 0 665.0803 2577.3371 S169s TMT10 164 (R) HLSVSsQNPGRSSPPPGYVPER (Q) HLS(0.0)VS(0.0)S(0.99)QNPGRS(0.0)S(0.0)PPPGY(0.0)VPER s:Phosphorylated S MAP3K3 71295.8 2 1 1082.2 179.91 HUMAN 1 17.9323 17.3291 SRHPNQATPKKSGLK-p Q96F86;T173-p SRHPNQATPKKSGLK 0.152381872383781 0.00101523888709478 -0.425666666666667 -1.59666666666667 16.4391035881825 52.1279945082296 -0.425666666666667 -1.59666666666667 0.0227033341498277 6.12633229134556e-06 -3.15296338283135 -17.2033250205577 Q96F86 EDC3 Q96F86.T173.p_EDC3 Q96F86_T173t _1_1_173_173 Q96F86 Q96F86 Enhancer of mRNA-decapping protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3085.3085.3 8.74 8.74 99 1 1 1 0 520.2887 1478.8844 T173t Hydrogen 168 (R) HPNQAtPKK (S) HPNQAT(1.0)PKK K:TMT10-Lys-Only,t:Phosphorylated T EDC3 56818.2 3 5 2217.1 93.04 HUMAN 1 -16.4391 -52.128 SRHPSYRSEPSLEPE-p Q9C0B5;S398-p SRHPSYRSEPSLEPE 0.446920841258647 0.993138242515468 0.146 0.00100000000000002 6.45126010320837 0.0420292810801734 0.146 0.00100000000000003 0.226398731752778 0.990369077662642 1.36457418750757 0.0126373652668033 Q9C0B5 ZDHHC5 Q9C0B5.S398.p_ZDHHC5 Q9C0B5_S398s _1_1_398_398 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8069.8069.3 8.45 2.8 1.169 5 1 1 0 743.0181 2147.0719 S398s TMT10 393 (R) HPSYRsEPSLEPESFR (S) HPS(0.0)Y(0.0)RS(0.99)EPS(0.0)LEPES(0.0)FR s:Phosphorylated S ZDHHC5 78285 6 7 134.1 530.74 HUMAN 1 6.4513 0.042 SRHQDRLSPKSSQKA-p Q8IVM0-2;S276-p SRHQDRLSPKSSQKA 0.8274347971594 0.112380248467204 0.0306666666666667 0.303666666666667 1.58285645923529 12.522812231202 0.0306666666666667 0.303666666666667 0.694567333684112 0.0559395253295988 0.414304181785204 2.42415310619326 Q8IVM0 CCDC50 Q8IVM0.2.S276.p_CCDC50 Q8IVM0-2_S276s _1_1_276_276 Q8IVM0-2 Q8IVM0-2 Isoform 2 of Coiled-coil domain-containing protein 50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4142.4142.3 9.62 6.57 99 1 1 1 0 506.9453 1438.8531 S276s TMT10 271 (R) HQDRLsPK (S) HQDRLS(1.0)PK K:TMT10,s:Phosphorylated S CCDC50 56680.9 3 1 4278.1 34.35 HUMAN 1 1.5829 12.5228 SRHRNSSSESAIVPK-p Q5THJ4;S2436-p SRHRNSSSESAIVPK 0.205202263113483 0.0405511424965007 -0.201666666666667 -0.257 13.3035196112983 18.6628980897415 -0.201666666666667 -0.257 0.0467356232721474 0.0136053648011481 -2.56590609862665 -3.59460740856359 Q5THJ4 VPS13D Q5THJ4.S2436.p_VPS13D Q5THJ4_S2436s _1_1_2436_2436 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6397.6397.4 12.33 12.33 1.708 4 1 1 0 488.2613 1870.0547 S2436s TMT10 2431 (R) HRNSSsESAIVPK (T) HRNS(0.0)S(0.0)S(0.99)ES(0.0)AIVPK K:TMT10,s:Phosphorylated S VPS13D 495672.3 6 17 124.1 545.31 HUMAN 1 -13.3035 -18.6629 SRHVRHASVPATFMP-p Q96PE2;S961-p SRHVRHASVPATFMP 0.389389394272965 0.074615957147091 0.164333333333333 0.223666666666667 7.57545380825446 14.9619664349653 0.164333333333333 0.223666666666667 0.174765063524809 0.031900930909446 1.56141392887156 2.869454367619 Q96PE2 ARHGEF17 Q96PE2.S961.p_ARHGEF17 Q96PE2_S961s _1_1_961_961 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.36418.36418.3 27.99 27.99 1.116 5 1 1 0 1300.6837 3820.0709 S961s TMT10 959 (R) HAsVPATFMPIVVPEPPTSVGPPVAVPEPIGFPTR (A) HAS(0.99)VPAT(0.0)FMPIVVPEPPT(0.0)S(0.0)VGPPVAVPEPIGFPT(0.0)R s:Phosphorylated S ARHGEF17 223779.6 3 31 30.1 908.19 HUMAN 1 7.5755 14.962 SRHYEDGYPGGSDNY-p O60716;Y221-p SRHYEDGYPGGSDNY 0.0211572678163944 0.0460492525603031 1.3675 -0.950333333333333 39.0578082541201 17.886565784121 1.3675 -0.950333333333333 0.000124227908809663 0.0162683467886476 12.6440459661415 -3.43655360271115 O60716 CTNND1 O60716.Y221.p_CTNND1 O60716_Y221y _1_1_221_221 O60716 O60716|O60716-2|O60716-4|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-19|O60716-21|O60716-23|O60716-24 Catenin delta-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.10354.10354.3 14.35 14.35 5.018 6 1 1 0 761.654 2202.989 Y221y TMT10 216 (R) HYEDGyPGGSDNYGSLSR (V) HY(0.0)EDGY(0.99)PGGS(0.0)DNY(0.0)GS(0.0)LS(0.0)R y:Phosphorylated Y CTNND1 108738.6 1 1 51.1 43.85 HUMAN 1 39.0578 -17.8866 SRIKIEPSPLKENTL-p Q5HYC2;S630-p SRIKIEPSPLKENTL 0.248376141190645 0.00119729192543449 -0.192 -1.221 11.5566910385323 48.0977525476771 -0.192 -1.221 0.0698764601610331 1.5496183312253e-05 -2.25394157197249 -14.450269961441 Q5HYC2 KIAA2026 Q5HYC2.S630.p_KIAA2026 Q5HYC2_S630s _1_1_630_630 Q5HYC2 Q5HYC2|Q5HYC2-2 Uncharacterized protein KIAA2026 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18326.18326.3 7.07 7.07 99 1 1 1 0 598.0369 1712.1289 S630s TMT10 625 (R) IKIEPsPLK (E) IKIEPS(1.0)PLK K:TMT10,s:Phosphorylated S KIAA2026 230080 1 1 3788.1 43.04 HUMAN 1 -11.5567 -48.0978 SRIMEETSGMEEEEE-p F8VU39;S1049-p SRIMEETSGMEEEEE 0.404766243702161 0.254409386599836 0.112333333333333 0.123333333333333 7.25214715657706 7.83153056621592 0.112333333333333 0.123333333333333 0.188271804153395 0.164758163876131 1.50508205578462 1.60542383162525 F8VU39 BAZ2A F8VU39.S1049.p_BAZ2A F8VU39_S1049s _1_1_1049_1049 F8VU39 Q9UIF9|F8VU39|Q9UIF9-3|Q9UIF9-2|J3KPG5 Bromodomain adjacent to zinc finger domain protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23168.23168.2 21.27 21.27 1.118 3 1 1 0 1431.1223 2781.2644 S1049s TMT10 1044 (R) IMEETsGMEEEEEEESIAAVPGR (R) IMEET(0.0)S(0.99)GMEEEEEEES(0.0)IAAVPGR s:Phosphorylated S BAZ2A 212873.4 12 8 471.1 302.34 HUMAN 1 7.2521 7.8315 SRIPLVRSFADIGKK-p Q9Y6M7-13;S242-p SRIPLVRSFADIGKK 0.988074013557504 0.452574790517004 -0.00333333333333333 0.075 0.106843985393519 4.58884226130553 -0.00333333333333331 0.075 0.975698419429641 0.347628819700043 -0.031896007566918 1.02794833466646 Q9Y6M7 SLC4A7 Q9Y6M7.13.S242.p_SLC4A7 Q9Y6M7-13_S242s _1_1_242_242 Q9Y6M7-13 Q6U841|C9J240|Q6U841-3|Q6U841-2|E7EW28|F8WDX9|Q6U841-4|Q9Y6M7-7|Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-9|Q9Y6M7-2|Q9Y6M7-3|Q9Y6M7-4|Q9Y6M7-14|Q9Y6M7-11 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27274.27477.3 15.81 9.57 99 1 1 1 0 618.6938 1774.0991 S242s TMT10 237 (R) IPLVRsFADIGK (K) IPLVRS(1.0)FADIGK K:TMT10,s:Phosphorylated S SLC4A7 128884.6 15 5 207.1 445.25 HUMAN 1 -0.1068 4.5888 SRIPQNPSPHTHQQQ-p Q68CP9;S689-p SRIPQNPSPHTHQQQ 0.982673656696447 0.267438245157133 -0.00400000000000001 0.13 0.152198179330643 7.54195909268003 -0.00400000000000001 0.13 0.965562036548564 0.176118140220836 -0.0452092458485362 1.55512225555942 Q68CP9 ARID2 Q68CP9.S689.p_ARID2 Q68CP9_S689s _1_1_689_689 Q68CP9 Q68CP9|Q68CP9-3|F8WCU9|F8W108 AT-rich interactive domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9597.9597.3 16.41 16.41 1.17 4 1 1 0 953.4876 2778.4848 S689s Hydrogen 684 (R) IPQNPsPHTHQQQNAPVTVIQSK (A) IPQNPS(0.99)PHT(0.0)HQQQNAPVT(0.0)VIQS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S ARID2 199041.9 3 2 1654.1 123.29 HUMAN 1 -0.1522 7.542 SRIPVSKSQPVTPEK-p P54274;S367-p SRIPVSKSQPVTPEK 0.434508986821391 0.00272422972588299 0.22 -1.02833333333333 6.66806506188559 38.9274425927635 0.22 -1.02833333333333 0.215374109011153 0.00012801349086089 1.40277526803011 -9.6592501274383 P54274 TERF1 P54274.S367.p_TERF1 P54274_S367sT371t_2_2_367_371 P54274 P54274|P54274-2 Telomeric repeat-binding factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17299.17299.4 8.2 8.2 1.104 3 2 2 0 565.0606 2097.2887 S367s T371t TMT10 362 (R) IPVSKsQPVtPEK (H) IPVS(0.0)KS(0.99)QPVT(0.99)PEK K:TMT10,s:Phosphorylated S,t:Phosphorylated T TERF1 50701.1 2 5 3678.1 45.5 HUMAN 1 6.6681 -38.9274 SRIRRRGSDIDNPTL-p Q9Y2U5;S331-p SRIRRRGSDIDNPTL 0.440444853294815 0.492934412753814 0.112333333333333 0.07 6.55932741838205 4.10612447005631 0.112333333333333 0.07 0.220834670798237 0.38849689578142 1.38363316511087 0.937199946644583 Q9Y2U5 MAP3K2 Q9Y2U5.S331.p_MAP3K2 Q9Y2U5_S331s _1_1_331_331 Q9Y2U5 Q9Y2U5 Mitogen-activated protein kinase kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21283.21283.3 15.25 15.25 6.663 5 1 1 0 827.404 2400.239 S331s TMT10 329 (R) RGsDIDNPTLTVMDISPPSR (S) RGS(0.99)DIDNPT(0.0)LT(0.0)VMDIS(0.0)PPS(0.0)R s:Phosphorylated S MAP3K2 70081.9 5 14 1082.1 179.91 HUMAN 1 6.5593 4.1061 SRISVSRSTSFRGGM-p P05783;S51-p SRISVSRSTSFRGGM 0.42081761725115 0.20090220225381 -0.143333333333333 0.132666666666667 6.93335038927215 9.16897645108005 -0.143333333333333 0.132666666666667 0.202611905547871 0.121088348197005 -1.4493414343651 1.8369431395556 P05783 KRT18 P05783.S51.p_KRT18 P05783_S51s _1_1_51_51 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10907.10907.3 12.13 12.13 1.109 5 1 1 0 483.586 1368.7797 S51s TMT10 46 (R) ISVSRsTSFR (G) IS(0.0)VS(0.0)RS(0.99)T(0.0)S(0.0)FR s:Phosphorylated S KRT18 48057 289 12 89.1 623.62 HUMAN 1 -6.9334 9.169 SRKEPPLTPVPLKRA-p A6NMQ1;T225-p SRKEPPLTPVPLKRA 0.689454359376595 0.00745966767748391 -0.0583333333333333 -0.495333333333333 3.02803538246498 30.4218740164319 -0.0583333333333334 -0.495333333333333 0.497962297192534 0.000907428882653688 -0.726100870221624 -6.55093727316862 A6NMQ1 POLA1 A6NMQ1.T225.p_POLA1 A6NMQ1_T225t _1_1_225_225 A6NMQ1 A6NMQ1|P09884|A0A087WU64 DNA polymerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18722.18722.3 12.3 12.3 99 1 1 1 0 662.7391 1906.2344 T225t TMT10 220 (R) KEPPLtPVPLK (R) KEPPLT(1.0)PVPLK K:TMT10,t:Phosphorylated T POLA1 168280.1 2 4 1873.1 109.8 HUMAN 1 -3.028 -30.4219 SRKFFTGSLAEVEKS-p Q13049;S209-p SRKFFTGSLAEVEKS 0.45478201108352 0.339138283893353 -0.171666666666667 0.092 6.31214196080586 6.22138230325811 -0.171666666666667 0.0920000000000001 0.233768399755106 0.238705139435194 -1.33998430105185 1.32358090865866 Q13049 TRIM32 Q13049.S209.p_TRIM32 Q13049_S209s _1_1_209_209 Q13049 Q13049 E3 ubiquitin-protein ligase TRIM32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.26693.26693.3 8.88 8.88 1.691 2 1 1 0 589.3114 1685.9514 S209s TMT10 205 (K) FFTGsLAEVEK (S) FFT(0.0)GS(0.99)LAEVEK K:TMT10,s:Phosphorylated S TRIM32 73584.8 1 2 2980.1 64.18 HUMAN 1 -6.3121 6.2214 SRKFSRLSCLRRRRH-p Q9UPR3;S457-p SRKFSRLSCLRRRRH 0.337963113037878 0.825657726325012 0.351 -0.05 8.77236946288766 1.16371469712768 0.351 -0.05 0.132667044345016 0.764942041010754 1.76895976686597 -0.314423278728775 Q9UPR3 SMG5 Q9UPR3.S457.p_SMG5 Q9UPR3_S457s _1_1_457_457 Q9UPR3 Q9UPR3 Protein SMG5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14357.14357.3 8.82 8.82 8.822 2 1 1 0 449.8982 1267.7142 S457s TMT10 453 (K) FSRLsCLR (R) FS(0.0)RLS(0.99)CLR C:Carbamidomethylation,s:Phosphorylated S SMG5 115523.1 1 2 3900.1 41.05 HUMAN 1 8.7724 -1.1637 SRKKKPDSPPKVLEP-p Q96T23;S748-p SRKKKPDSPPKVLEP 0.345605365156858 0.00978676363437237 -0.311 0.585 8.57548995909782 28.2827993354128 -0.311 0.585 0.13881966885595 0.00148497816017819 -1.73487729507497 5.91752452395696 Q96T23 RSF1 Q96T23.S748.p_RSF1 Q96T23_S748s _1_1_748_748 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12061.12061.5 14.8 14.8 99 1 1 1 0 587.1519 2851.763 S748s TMT10 744 (K) KKPDsPPKVLEPENK (Q) KKPDS(1.0)PPKVLEPENK K:TMT10,s:Phosphorylated S RSF1 165358.1 15 12 39.1 857.38 HUMAN 1 -8.5755 28.2828 SRKLNGHSGLIVKEI-p Q96NE9;S497-p SRKLNGHSGLIVKEI 0.408887654027387 0.6684220242286 0.115 -0.057 7.16376589538753 2.3940723983264 0.115 -0.057 0.192142488221175 0.576225880453365 1.48965022063459 -0.594331505972839 Q96NE9 FRMD6 Q96NE9.S497.p_FRMD6 Q96NE9_S497s _1_1_497_497 Q96NE9 Q96NE9|Q96NE9-2|G3V4T7|Q96NE9-3 FERM domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13150.13150.3 13.86 13.86 99 1 1 1 0 645.059 1853.194 S497s TMT10 492 (R) KLNGHsGLIVK (E) KLNGHS(1.0)GLIVK K:TMT10,s:Phosphorylated S FRMD6 72898.5 3 2 1456.1 140.48 HUMAN 1 7.1638 -2.3941 SRKPSDGSPDTKPSR-p Q92733;S212-p SRKPSDGSPDTKPSR 0.622172474425454 0.00273649503124045 0.0756666666666667 -0.807666666666667 3.83077492511334 38.8798611242138 0.0756666666666667 -0.807666666666667 0.413925810163913 0.000129423722704114 0.884640673298971 -9.63877654649819 Q92733 PRCC Q92733.S212.p_PRCC Q92733_S212s _1_1_212_212 Q92733 Q92733 Proline-rich protein PRCC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.4928.4928.3 14.46 9.53 1.537 4 1 1 0 713.7188 2059.1751 S212s TMT10 207 (R) KPSDGsPDTKPSR (L) KPS(0.0)DGS(0.99)PDT(0.0)KPS(0.0)R K:TMT10,s:Phosphorylated S PRCC 52416.8 9 9 1101.1 177.58 HUMAN 1 3.8308 -38.8799 SRKQRTLSMIEEEIR-p Q9Y2D5-4;S951-p SRKQRTLSMIEEEIR 0.771638354290043 0.996148543290995 -0.053 0.000666666666666704 2.15491966965129 0.0234514045592217 -0.053 0.000666666666666675 0.608846807342202 0.994614667719737 -0.542843199049095 0.00706629480029108 Q9Y2D5 AKAP2 Q9Y2D5.4.S951.p_AKAP2 Q9Y2D5-4_S951s _1_1_951_951 Q9Y2D5-4 Q9Y2D5-4|Q9Y2D5-6|Q9Y2D5-7 Isoform 3 of A-kinase anchor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28197.28197.2 12.29 6.25 3.017 2 1 1 0 765.3769 1449.782 S951s TMT10 949 (R) TLsMIEEEIR (A) T(0.0)LS(0.99)MIEEEIR s:Phosphorylated S AKAP2 122582.3 2 14 779.1 226.39 HUMAN 1 -2.1549 0.0235 SRKRKRDSDAGSSTP-p A0A0A0MT49;S1451-p SRKRKRDSDAGSSTP 0.473364432411376 0.00446703664279315 0.123666666666667 -0.886666666666667 5.98248626989332 34.515056698402 0.123666666666667 -0.886666666666667 0.252203653153931 0.000353585404910423 1.28144301400207 -7.91738473479189 A0A0A0MT49 NotFound A0A0A0MT49.S1451.p_NotFound A0A0A0MT49_S1451s _1_1_1451_1451 A0A0A0MT49 A0A0A0MT49|Q9HBD4|P51532|P51532-4|P51532-3 Transcription activator BRG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3991.3991.3 15.06 15.06 3.657 8 1 1 0 616.6172 1767.8671 S1451s TMT10 1449 (K) RDsDAGSSTPTTSTR (S) RDS(0.99)DAGS(0.0)S(0.0)T(0.0)PT(0.0)T(0.0)S(0.0)T(0.0)R s:Phosphorylated S SMARCA4 189484.7 4 10 392.1 331.85 HUMAN 1 5.9825 -34.5151 SRKRRRLSNLPTVDP-p Q86U86;S39-p SRKRRRLSNLPTVDP 0.230129801548278 0.18631080456314 -0.177333333333333 0.139666666666667 12.2597924703416 9.59763443576928 -0.177333333333333 0.139666666666667 0.0594320557824082 0.109707560095588 -2.3785010829383 1.91114436504278 Q86U86 PBRM1 Q86U86.S39.p_PBRM1 Q86U86_S39s _1_1_39_39 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-9|Q86U86-3|Q86U86-7|Q86U86-4|Q86U86-5|Q86U86-6 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29314.29314.5 31.21 31.21 3.021 5 1 1 0 777.1908 3801.9544 S39s Hydrogen 37 (R) RLsNLPTVDPIAVCHELYNTIRDYKDEQGR (L) RLS(0.99)NLPT(0.0)VDPIAVCHELY(0.0)NT(0.0)IRDY(0.0)KDEQGR C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S PBRM1 194199.5 13 2 194.1 462.54 HUMAN 1 -12.2598 9.5976 SRKRVCSSDSDSSLQ-p Q9NSI6-2;S1905-p SRKRVCSSDSDSSLQ 0.501862932993742 0.0739469982719304 0.102333333333333 -0.217666666666667 5.52172564967753 15.0114000910374 0.102333333333333 -0.217666666666667 0.280431913289396 0.0315398766784636 1.19886628929098 -2.87870931317571 Q9NSI6 BRWD1 Q9NSI6.2.S1905.p_BRWD1 Q9NSI6-2_S1904sS1905s_2_2_1904_1905 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14047.14047.4 8.12 8.12 8.116 5 2 2 0 661.336 2482.3902 S1904s S1905s TMT10 1901 (K) RVCssDSDSSLQVVKK (S) RVCS(0.99)S(0.99)DS(0.0)DS(0.0)S(0.0)LQVVKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRWD1 259915.1 2 32 208.1 444.81 HUMAN 2 5.5217 -15.0114 SRKSDPVTPKSEKKS-p Q8IYW5;T208-p SRKSDPVTPKSEKKS 0.356784883442257 0.00153570152759703 -0.141333333333333 -1.31933333333333 8.32188260018334 45.3742153865644 -0.141333333333333 -1.31933333333333 0.147167441578228 2.90120529447055e-05 -1.69095764598125 -12.8344124737057 Q8IYW5 RNF168 Q8IYW5.T208.p_RNF168 Q8IYW5_T208t _1_1_208_208 Q8IYW5 Q8IYW5 E3 ubiquitin-protein ligase RNF168 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8039.8039.2 10.09 3.53 4.089 2 1 1 0 819.9748 1558.9772 T208t TMT10 203 (R) KSDPVtPK (S) KS(0.0)DPVT(0.99)PK K:TMT10,t:Phosphorylated T RNF168 66159.9 4 5 1172.1 170.1 HUMAN 1 -8.3219 -45.3742 SRKSRCVSVQTDPTD-p P18583-5;S94-p SRKSRCVSVQTDPTD 0.164162708749184 0.576355627540859 -0.224 -0.071 15.71713475589 3.22656747563725 -0.224 -0.071 0.0268093648085216 0.475711064173202 -3.01406367125059 -0.765954472904705 P18583 SON P18583.5.S94.p_SON P18583-5_S94s _1_1_94_94 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-2|P18583-6|P18583-8 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14107.14107.3 18.38 18.38 3.439 4 1 1 0 786.067 2276.2208 S94s Hydrogen 92 (R) CVsVQTDPTDEIPTKK (S) CVS(0.99)VQT(0.0)DPT(0.0)DEIPT(0.0)KK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S SON 267429.6 10 4 45.1 778.56 HUMAN 1 -15.7171 -3.2266 SRLEEAMSELTMPSS-p Q9ULT0-4;S714-p SRLEEAMSELTMPSS 0.509586094340038 0.161261365306528 0.098 0.146666666666667 5.4073654258813 10.4216443341699 0.098 0.146666666666667 0.287914446943619 0.0907476874474537 1.17821380997898 2.05419877928632 Q9ULT0 TTC7A Q9ULT0.4.S714.p_TTC7A Q9ULT0-4_S714s _1_1_714_714 Q9ULT0-4 Q9ULT0-4|G5E9G4 Isoform 3 of Tetratricopeptide repeat protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26780.26780.2 13.17 11.9 2.512 4 1 1 0 1037.5034 1994.0387 S714s Hydrogen 709 (R) LEEAMsELTMPSSVLK (Q) LEEAMS(0.99)ELT(0.0)MPS(0.0)S(0.0)VLK K:TMT10-Lys-Only,s:Phosphorylated S TTC7A 99850 4 4 1883.1 109.27 HUMAN 1 5.4074 10.4216 SRLETAESKEKMALP-p Q9UQ35;S1164-p SRLETAESKEKMALP 0.103499370858852 0.00388507065497343 0.414666666666667 -0.593666666666667 20.7999068439811 35.5923015599592 0.414666666666667 -0.593666666666667 0.00831781612598661 0.00027591152651782 4.05276097447691 -8.31483642252032 Q9UQ35 SRRM2 Q9UQ35.S1164.p_SRRM2 Q9UQ35_S1164s _1_1_1164_1164 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9939.9939.3 11.76 11.76 2.074 2 1 1 0 601.3361 1722.0252 S1164s TMT10 1159 (R) LETAEsKEK (M) LET(0.0)AES(0.99)KEK K:TMT10,s:Phosphorylated S SRRM2 300351.7 1 65 2.1 3310.34 HUMAN 1 20.7999 -35.5923 SRLFHRHSKGTAHDQ-p P22694-2;S34-p SRLFHRHSKGTAHDQ 0.327235402368092 0.00991769079995784 -0.300666666666667 0.567333333333333 9.07987297650185 28.1706344072816 -0.300666666666667 0.567333333333333 0.123598358326197 0.00152383013997438 -1.82219030768021 5.88568706851907 P22694 PRKACB P22694.2.S34.p_PRKACB P22694-2_S34s _1_1_34_34 P22694-2 P22694-2 Isoform 2 of cAMP-dependent protein kinase catalytic subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5174.5174.4 9.37 9.37 99 1 1 1 0 366.4572 1382.8421 S34s TMT10 29 (R) LFHRHsK (G) LFHRHS(1.0)K K:TMT10,s:Phosphorylated S PRKACB 46406.2 1 6 1853.2 110.97 HUMAN 1 -9.0799 28.1706 SRLHRASSCETYEYP-p Q9UQC2;S405-p SRLHRASSCETYEYP 0.226671380089871 0.0128825229095723 -0.224333333333333 -0.404333333333333 12.3842896705292 26.3174661461272 -0.224333333333333 -0.404333333333333 0.0577525324688032 0.00233481989559229 -2.40068825840152 -5.3781990832496 Q9UQC2 GAB2 Q9UQC2.S405.p_GAB2 Q9UQC2_S405s _1_1_405_405 Q9UQC2 Q9UQC2|Q9UQC2-2 GRB2-associated-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8716.8716.2 14.38 14.38 1.391 5 1 1 0 900.3792 1719.7846 S405s TMT10 403 (R) ASsCETYEYPQR (G) AS(0.0)S(0.99)CET(0.0)Y(0.0)EY(0.0)PQR C:Carbamidomethylation,s:Phosphorylated S GAB2 74969.7 3 9 698.1 241.06 HUMAN 1 -12.3843 -26.3175 SRLLRSQSESSDEVT-p Q86YS7-3;S659-p SRLLRSQSESSDEVT 0.111103148134641 0.0304698237240543 0.349 0.650666666666667 19.946194355293 20.4931044725592 0.349 0.650666666666667 0.0101246627169966 0.00892667149259152 3.8674126020597 3.98174048183461 Q86YS7 C2CD5 Q86YS7.3.S659.p_C2CD5 Q86YS7-3_S659s _1_1_659_659 Q86YS7-3 Q86YS7-5|Q86YS7-4|Q86YS7-3|Q86YS7-2 Isoform 3 of C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13388.13388.3 23.51 23.51 2.203 6 1 1 0 948.4826 2763.4615 S659s TMT10 657 (R) SQsESSDEVTELDLSHGKK (D) S(0.0)QS(0.99)ES(0.0)S(0.0)DEVT(0.0)ELDLS(0.0)HGKK K:TMT10,s:Phosphorylated S C2CD5 117622.7 6 11 349.1 351.16 HUMAN 1 19.9462 20.4931 SRLNATASLEQERSE-p O76024;S32-p SRLNATASLEQERSE 0.416687334106096 0.010624978962164 -0.139333333333333 -0.545 7.01681323350091 27.6787204997555 -0.139333333333333 -0.545 0.198755280911209 0.00170658510191329 -1.46395596010708 -5.74760631303602 O76024 WFS1 O76024.S32.p_WFS1 O76024_S32s _1_1_32_32 O76024 O76024 Wolframin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12306.12306.2 13.3 6.72 1.166 2 1 1 0 770.882 1460.7906 S32s TMT10 27 (R) LNATAsLEQER (S) LNAT(0.0)AS(0.99)LEQER s:Phosphorylated S WFS1 101430.7 4 1 3140.1 59.55 HUMAN 1 -7.0168 -27.6787 SRLPKTRSYDNLTTA-p Q13615;S613-p SRLPKTRSYDNLTTA 0.631680474304534 0.115201789567368 0.0846666666666667 -0.173 3.71448173234694 12.3818131529844 0.0846666666666667 -0.173 0.425159440407617 0.0577854746204787 0.862143300810042 -2.39900440767578 Q13615 MTMR3 Q13615.S613.p_MTMR3 Q13615_S613s _1_1_613_613 Q13615 Q13615|Q13615-2|Q13615-3|G5E953 Myotubularin-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18545.18545.3 20.04 20.04 1.8 6 1 1 0 769.6893 2227.0862 S613s TMT10 613 (R) sYDNLTTACDNTVPLASR (R) S(0.99)Y(0.0)DNLT(0.0)T(0.0)ACDNT(0.0)VPLAS(0.0)R C:Carbamidomethylation,s:Phosphorylated S MTMR3 136241 6 4 913.1 201.43 HUMAN 1 3.7145 -12.3818 SRLQARNSCPGPLDS-p Q9NP71;S361-p SRLQARNSCPGPLDS 0.831901048906948 0.651742063679064 -0.0406666666666667 0.0703333333333333 1.54078802419391 2.53869253839123 -0.0406666666666667 0.0703333333333334 0.701328031410401 0.557353517272508 -0.40452105970785 0.624970113439166 Q9NP71 MLXIPL Q9NP71.S361.p_MLXIPL Q9NP71_S361s _1_1_361_361 Q9NP71 Q9NP71|Q9NP71-3|Q9NP71-2|Q9NP71-4|Q9NP71-6|A0A0C4DG26|Q9NP71-5 Carbohydrate-responsive element-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31678.31678.4 10.79 10.79 3.786 5 1 1 0 846.9206 3304.6924 S361s TMT10 360 (R) NsCPGPLDSSAFLSSDFLLPEDPKPR (L) NS(0.99)CPGPLDS(0.0)S(0.0)AFLS(0.0)S(0.0)DFLLPEDPKPR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MLXIPL 93755.5 4 7 1023.1 187.4 HUMAN 1 -1.5408 2.5387 SRLQASLSSSDVRFP-p Q13796;S413-p SRLQASLSSSDVRFP 0.179420120091279 0.917369744589267 0.225666666666667 0.012 14.7303121422697 0.527145321690382 0.225666666666667 0.012 0.0336487384009402 0.885697599942264 2.82802236418578 0.150650347553945 Q13796 SHROOM2 Q13796.S413.p_SHROOM2 Q13796_S413s _1_1_413_413 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15394.15394.4 24.4 24.4 1.132 6 1 1 0 617.0601 2385.2472 S413s TMT10 408 (R) LQASLsSSDVRFPQSPHSGR (H) LQAS(0.0)LS(0.99)S(0.0)S(0.0)DVRFPQS(0.0)PHS(0.0)GR s:Phosphorylated S SHROOM2 177605.1 2 7 90.1 622.62 HUMAN 1 14.7303 0.5271 SRLQDSRSLDGLSEA-p Q96GS4;S168-p SRLQDSRSLDGLSEA 0.237591296850965 0.0188679107880424 0.275666666666667 0.342333333333333 11.9634335183215 23.722965429345 0.275666666666667 0.342333333333333 0.0636292271360192 0.00424329726158312 2.32585039115137 4.72194073254552 Q96GS4 BORCS6 Q96GS4.S168.p_BORCS6 Q96GS4_S168s _1_1_168_168 Q96GS4 Q96GS4 BLOC-1-related complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7601.7601.3 21.71 21.71 6.939 6 1 1 0 830.6831 2410.0648 S168s Hydrogen 168 (R) sLDGLSEACGGAGSSGSAESGAGGGRR (A) S(0.99)LDGLS(0.0)EACGGAGS(0.0)S(0.0)GS(0.0)AES(0.0)GAGGGRR C:Carbamidomethylation,s:Phosphorylated S BORCS6 37625 5 4 1264.1 160.44 HUMAN 1 11.9634 23.723 SRLQRRQSFAVLRGA-p Q8TE77;S37-p SRLQRRQSFAVLRGA 0.794205360979352 0.0553195660854907 -0.0466666666666667 -0.244 1.93212103590071 16.7506761186086 -0.0466666666666667 -0.244 0.640896494901488 0.0211316003311386 -0.493716726265035 -3.21128608980404 Q8TE77 SSH3 Q8TE77.S37.p_SSH3 Q8TE77_S37s _1_1_37_37 Q8TE77 Q8TE77|Q8TE77-2|Q8TE77-4|C9JUG3 Protein phosphatase Slingshot homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11095.11329.3 10.28 10.28 99 1 1 1 0 429.237 1205.7316 S37s TMT10 35 (R) RQsFAVLR (G) RQS(1.0)FAVLR s:Phosphorylated S SSH3 73336.6 4 3 930.1 199.29 HUMAN 1 -1.9321 -16.7507 SRLRYNRSDIMPSGR-p Q8TB72;S700-p SRLRYNRSDIMPSGR 0.132506536300977 0.69515637718991 0.316333333333333 -0.0596666666666666 18.1170490342803 2.16992629341777 0.316333333333333 -0.0596666666666667 0.0154274837121394 0.606746626942611 3.4859925756625 -0.546047610632075 Q8TB72 PUM2 Q8TB72.S700.p_PUM2 Q8TB72_S700s _1_1_700_700 Q8TB72 Q8TB72|Q8TB72-3|Q8TB72-4|Q8TB72-2|A0A0A0MR59 Pumilio homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8999.8999.3 9.11 9.11 9.109 3 1 1 0 535.5873 1524.779 S700s TMT10 697 (R) YNRsDIMPSGR (S) Y(0.0)NRS(0.99)DIMPS(0.0)GR s:Phosphorylated S PUM2 114784.2 1 10 944.1 197.75 HUMAN 1 18.117 -2.1699 SRLSFSDSESDNSAD-p Q03111;S442-p SRLSFSDSESDNSAD 0.260407038253762 0.971438350726511 -0.171666666666667 -0.00366666666666665 11.072976356926 0.178031520863517 -0.171666666666667 -0.00366666666666665 0.078109231394086 0.959835587121762 -2.16889912992854 -0.052729623503126 Q03111 MLLT1 Q03111.S442.p_MLLT1 Q03111_S440sS442s_2_2_440_442 Q03111 Q03111 Protein ENL HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17951.17951.5 16.25 16.25 1.166 9 2 2 0 868.6222 4179.1449 S440s S442s TMT10 437 (R) LSFsDsESDNSADSSLPSREPPPPQKPPPPNSK (V) LS(0.0)FS(0.99)DS(0.99)ES(0.0)DNS(0.0)ADS(0.0)S(0.0)LPS(0.0)REPPPPQKPPPPNS(0.0)K K:TMT10,s:Phosphorylated S MLLT1 62454.4 2 10 685.1 243.68 HUMAN 1 -11.073 -0.178 SRLSKRNSTDSRPVS-p A0A088AWN2;S388-p SRLSKRNSTDSRPVS 0.807399255272832 0.00815813217337322 0.0486666666666667 0.488 1.78559016222248 29.7477729006593 0.0486666666666667 0.488 0.662889261611949 0.00105979705887104 0.4607779065204 6.34580115417592 A0A088AWN2 NotFound A0A088AWN2.S388.p_NotFound A0A088AWN2_S388s _1_1_388_388 A0A088AWN2 A0A088AWN2|Q8TBZ3-7|Q8TBZ3-2|Q8TBZ3-6|Q8TBZ3-5|Q8TBZ3-4 WD repeat-containing protein 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4784.4784.4 13.38 10.84 1.106 6 1 1 0 487.4958 1866.9983 S388s TMT10 386 (K) RNsTDSRPVSVTYR (F) RNS(0.99)T(0.0)DS(0.0)RPVS(0.0)VT(0.0)Y(0.0)R s:Phosphorylated S WDR20 68387.6 3 3 2446.1 83.15 HUMAN 1 1.7856 29.7478 SRLSLRRSLSGSSPC-p Q9UQ35;S778-p SRLSLRRSLSGSSPC 0.494953966394269 0.4959656723636 0.0953333333333333 0.0706666666666667 5.6255777652964 4.07331231989473 0.0953333333333333 0.0706666666666667 0.273805535181078 0.391443213466049 1.21756398358754 0.930957810821899 Q9UQ35 SRRM2 Q9UQ35.S778.p_SRRM2 Q9UQ35_S778s _1_1_778_778 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9634.9634.2 13.27 13.27 2.202 4 1 1 0 779.3917 1477.8085 S778s TMT10 778 (R) sLSGSSPCPK (Q) S(0.99)LS(0.0)GS(0.0)S(0.0)PCPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SRRM2 300351.7 8 21 2.1 3310.34 HUMAN 1 5.6256 4.0733 SRLSLTRSPVSPLAA-p Q96SI1;S35-p SRLSLTRSPVSPLAA 0.603818036069891 0.207197619684685 0.0686666666666667 0.136333333333333 4.04508837933647 8.99314455555191 0.0686666666666667 0.136333333333333 0.393995409719434 0.126091422558123 0.925738528226568 1.80652679371875 Q96SI1 KCTD15 Q96SI1.S35.p_KCTD15 Q96SI1_S35s _1_1_35_35 Q96SI1 Q96SI1-2 BTB/POZ domain-containing protein KCTD15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30689.30689.3 14.49 14.49 2.014 3 1 1 0 809.4661 2346.4161 S35s TMT10 35 (R) sPVSPLAAQGIPLPAQLTK (S) S(0.99)PVS(0.0)PLAAQGIPLPAQLT(0.0)K K:TMT10,s:Phosphorylated S KCTD15 32283.9 2 2 2985.1 64.05 HUMAN 1 4.0451 8.9931 SRLSPGGSLADAWAH-p Q9UHD2;S531-p SRLSPGGSLADAWAH 0.666595970118167 0.145084506401557 -0.0736666666666667 -0.187666666666667 3.29323295806625 11.042369109885 -0.0736666666666667 -0.187666666666667 0.468464519778866 0.0786616567231048 -0.779367117889805 -2.16255442135997 Q9UHD2 TBK1 Q9UHD2.S531.p_TBK1 Q9UHD2_S531s _1_1_531_531 Q9UHD2 Q9UHD2 Serine/threonine-protein kinase TBK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18038.18038.4 17.74 17.74 1.25 3 1 1 0 650.0782 2517.325 S531s TMT10 526 (R) LSPGGsLADAWAHQEGTHPK (D) LS(0.0)PGGS(0.99)LADAWAHQEGT(0.0)HPK K:TMT10,s:Phosphorylated S TBK1 84268.2 1 1 4702.1 27.76 HUMAN 1 -3.2932 -11.0424 SRLSQMQSPIPLTET-p Q2VPK5;S419-p SRLSQMQSPIPLTET 0.206758450653763 0.42463128671553 0.197333333333333 -0.0763333333333333 13.2307297629909 4.95117121317441 0.197333333333333 -0.0763333333333333 0.0475255360107935 0.319803254221605 2.55272751536343 -1.09488286018415 Q2VPK5 CTU2 Q2VPK5.S419.p_CTU2 Q2VPK5_S419s _1_1_419_419 Q2VPK5 H3BSW6|Q2VPK5|Q2VPK5-5|Q2VPK5-3 Cytoplasmic tRNA 2-thiolation protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20856.20856.3 17.63 17.63 5.924 4 1 1 0 637.3273 1829.9993 S419s TMT10 414 (R) LSQMQsPIPLTETR (T) LS(0.0)QMQS(0.99)PIPLT(0.0)ET(0.0)R s:Phosphorylated S CTU2 57247.3 4 2 3167.1 58.81 HUMAN 1 13.2307 -4.9512 SRMHEFHSQENLVVH-p Q9Y3M8;S389-p SRMHEFHSQENLVVH 0.358093663587113 0.0732070129983996 0.127333333333333 0.418666666666667 8.29057502421056 15.0788098612593 0.127333333333333 0.418666666666667 0.148232180649326 0.0310541047689328 1.68553371937576 2.89134624208672 Q9Y3M8 STARD13 Q9Y3M8.S389.p_STARD13 Q9Y3M8_S389s _1_1_389_389 Q9Y3M8 Q9Y3M8|Q9Y3M8-2|Q9Y3M8-4|Q9Y3M8-3|Q9Y3M8-5 StAR-related lipid transfer protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16307.16307.5 15.73 15.73 99 1 1 1 0 497.4594 2403.3007 S389s TMT10 384 (R) MHEFHsQENLVVHIPK (D) MHEFHS(1.0)QENLVVHIPK K:TMT10,s:Phosphorylated S STARD13 126277.4 9 5 564.1 271.22 HUMAN 1 8.2906 15.0788 SRMISEGSSPIRCPG-p Q13387;S363-p SRMISEGSSPIRCPG 0.153998790819573 0.312052347102094 0.260666666666667 0.125 16.325078389055 6.68471912739106 0.260666666666667 0.125 0.0233073104579741 0.214549786777381 3.13086021201401 1.40533318014387 Q13387 MAPK8IP2 Q13387.S363.p_MAPK8IP2 Q13387_S363s _1_1_363_363 Q13387 Q13387|Q13387-2 C-Jun-amino-terminal kinase-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13496.13496.2 7.44 1.16 1.121 3 1 1 0 693.3455 1305.7034 S363s TMT10 358 (R) MISEGsSPIR (C) MIS(0.0)EGS(0.99)S(0.0)PIR s:Phosphorylated S MAPK8IP2 89399.8 1 1 6183.1 13.36 HUMAN 1 16.3251 6.6847 SRMKPAGSVNDMALD-p Q9UI08-2;S371-p SRMKPAGSVNDMALD 0.836311692506797 0.494969578656457 0.0293333333333333 0.0806666666666667 1.50113503610312 4.08387579767423 0.0293333333333333 0.0806666666666667 0.707760785710854 0.390492251137811 0.39525366296988 0.932968486931063 Q9UI08 EVL Q9UI08.2.S371.p_EVL Q9UI08-2_S371s_1_1_371_371 Q9UI08-2 Q9UI08-2|Q9UI08-5 Isoform 1 of Ena/VASP-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26597.26597.3 10.32 10.32 99 1 1 1 0 869.0948 2524.294 S371s N373n TMT10 366 (R) MKPAGsVnDMALDAFDLDR (M) MKPAGS(1.0)VN(1.0)DMALDAFDLDR K:TMT10,s:Phosphorylated S,n:Deamidated EVL 44905.3 1 8 2000.1 103.33 HUMAN 1 1.5011 4.0839 SRMPRAQSYPDNHQE-p Q9Y2U5;S239-p SRMPRAQSYPDNHQE 0.390293561257211 0.614604205436038 0.129666666666667 -0.0526666666666667 7.55251551511541 2.87350822891581 0.129666666666667 -0.0526666666666667 0.175690568645161 0.515999376801814 1.55742279088677 -0.694506026499157 Q9Y2U5 MAP3K2 Q9Y2U5.S239.p_MAP3K2 Q9Y2U5_S239s _1_1_239_239 Q9Y2U5 Q9Y2U5 Mitogen-activated protein kinase kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21454.21454.4 17.03 17.03 3.283 4 1 1 0 771.3516 3002.4209 S239s TMT10 237 (R) AQsYPDNHQEFSDYDNPIFEK (F) AQS(0.99)Y(0.0)PDNHQEFS(0.0)DY(0.0)DNPIFEK K:TMT10,s:Phosphorylated S MAP3K2 70081.9 3 12 1082.1 179.91 HUMAN 1 7.5525 -2.8735 SRMSRAQSFPDNRQE-p Q99759;S250-p SRMSRAQSFPDNRQE 0.258247410038335 0.392638912937626 0.164666666666667 0.114666666666667 11.1709916822452 5.39727068225509 0.164666666666667 0.114666666666667 0.0763661386724879 0.288584453842915 2.18609308527195 1.17613347474266 Q99759 MAP3K3 Q99759.S250.p_MAP3K3 Q99759_S250s _1_1_250_250 Q99759 Q99759-2|J3QRB6|J3KRN4 Mitogen-activated protein kinase kinase kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13078.13078.4 17.07 10.25 15.606 5 1 1 0 782.8744 3048.5063 S250s TMT10 248 (R) AQsFPDNRQEYSDRETQLYDK (G) AQS(0.99)FPDNRQEY(0.0)S(0.0)DRET(0.0)QLY(0.0)DK K:TMT10,s:Phosphorylated S MAP3K3 71295.8 2 3 1082.2 179.91 HUMAN 1 11.171 5.3973 SRMSRRASLSDIGFG-p Q07002-2;S132-p SRMSRRASLSDIGFG 0.306735184126758 0.540669452611094 -0.159666666666667 0.0696666666666667 9.59929247409146 3.59286362638529 -0.159666666666667 0.0696666666666667 0.109665684219117 0.437233709398592 -1.91216990706078 0.838326866809826 Q07002 CDK18 Q07002.2.S132.p_CDK18 Q07002-2_S132s _1_1_132_132 Q07002-2 Q07002-3|Q07002-2 Isoform 2 of Cyclin-dependent kinase 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27540.27540.5 14.71 14.71 2.513 4 1 1 0 648.1728 3156.8802 S132s TMT10 130 (R) RAsLSDIGFGKLETYVKLDK (L) RAS(0.99)LS(0.0)DIGFGKLET(0.0)Y(0.0)VKLDK K:TMT10,s:Phosphorylated S CDK18 54765.8 11 7 1225.1 164.54 HUMAN 1 -9.5993 3.5929 SRNAENESPKGQASS-p Q8WW38;S1014-p SRNAENESPKGQASS 0.585770674980478 0.117169286111329 0.0766666666666667 -0.175 4.27123699382605 12.2787980955244 0.0766666666666667 -0.175 0.374004046142662 0.0591725370764045 0.968634562880706 -2.38066497610599 Q8WW38 ZFPM2 Q8WW38.S1014.p_ZFPM2 Q8WW38_S1014s_1_1_1014_1014 Q8WW38 Q8WW38|Q8WW38-2|E7ET52 Zinc finger protein ZFPM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10570.10570.4 11.4 5.62 9.436 3 1 1 0 790.4153 3077.6819 S1014s N1022n TMT10 1009 (R) NAENEsPKGQASSnGCAALKK (D) N(0.0)AEN(0.0)ES(0.99)PKGQAS(0.0)S(0.0)N(0.99)GCAALKK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated ZFPM2 130381.7 2 9 1154.1 171.84 HUMAN 1 4.2712 -12.2788 SRNEERDSDTEKEGP-p Q6UB98-2;S76-p SRNEERDSDTEKEGP 0.813083216141779 0.406179928608824 0.0396666666666667 0.119333333333333 1.72653912402812 5.20963336301892 0.0396666666666667 0.119333333333333 0.671964125238474 0.301326039676262 0.447352862127456 1.14210031286865 Q6UB98 ANKRD12 Q6UB98.2.S76.p_ANKRD12 Q6UB98-2_S76s _1_1_76_76 Q6UB98-2 Q6UB98-2 Isoform 2 of Ankyrin repeat domain-containing protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12513.12513.5 9.53 9.53 2.742 5 1 1 0 732.1816 3576.9113 S76s Hydrogen 61 (R) KLPFTISPSRNEERDsDTEKEGPEK (K) KLPFT(0.0)IS(0.0)PS(0.0)RNEERDS(0.99)DT(0.0)EKEGPEK K:TMT10-Lys-Only,s:Phosphorylated S ANKRD12 234548.2 1 1 480.1 298.87 HUMAN 1 1.7265 5.2096 SRNIGSNYPEKLSAR-p Q7Z6E9;Y898-p SRNIGSNYPEKLSAR 0.146674740935683 0.00529788970173323 -0.306666666666667 -0.957333333333333 16.9643198963404 33.067727028679 -0.306666666666667 -0.957333333333333 0.0201172220853846 0.000493431984372174 -3.25561059761636 -7.40922646308875 Q7Z6E9 RBBP6 Q7Z6E9.Y898.p_RBBP6 Q7Z6E9_Y898y _1_1_898_898 Q7Z6E9 Q7Z6E9|Q7Z6E9-2 E3 ubiquitin-protein ligase RBBP6 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11397.11397.2 10.85 4.4 2.157 2 1 1 0 780.3975 1479.8208 Y898y TMT10 893 (R) NIGSNyPEK (L) NIGS(0.0)NY(0.99)PEK K:TMT10,y:Phosphorylated Y RBBP6 202473.6 2 1 323.1 10.85 HUMAN 1 -16.9643 -33.0677 SRNKPYISWPSSGGS-p Q9Y5S2;S1640-p SRNKPYISWPSSGGS 0.0332552830156115 0.00526365807851177 -0.729 -0.532 34.6209084064596 33.1153284068776 -0.729 -0.532 0.000345071553750427 0.000488053194012411 -7.97092704563604 -7.42548603468097 Q9Y5S2 CDC42BPB Q9Y5S2.S1640.p_CDC42BPB Q9Y5S2_S1640s _1_1_1640_1640 Q9Y5S2 Q9Y5S2 Serine/threonine-protein kinase MRCK beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23793.23793.3 13.79 12.35 2.558 7 1 1 0 966.173 2816.5347 S1640s TMT10 1635 (R) NKPYIsWPSSGGSEPSVTVPLR (S) NKPY(0.0)IS(0.99)WPS(0.0)S(0.0)GGS(0.0)EPS(0.0)VT(0.0)VPLR K:TMT10,s:Phosphorylated S CDC42BPB 196308.8 2 8 1601.1 128.56 HUMAN 1 -34.6209 -33.1153 SRNMGGPYGGGNYGP-p P22626;Y331-p SRNMGGPYGGGNYGP 0.957246455101486 0.283944374109889 0.0106666666666666 -0.229 0.372049624961077 7.2094877390154 0.0106666666666667 -0.229 0.917899297557239 0.190130252999053 0.10798411517366 -1.49720927818914 P22626 HNRNPA2B1 P22626.Y331.p_HNRNPA2B1 P22626_Y331y _1_1_331_331 P22626 P22626|P22626-2 Heterogeneous nuclear ribonucleoproteins A2/B1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11479.11526.3 31.78 31.78 10.848 5 1 1 0 833.6838 2419.0683 Y331y TMT10 326 (R) NMGGPyGGGNYGPGGSGGSGGYGGR (S) NMGGPY(0.99)GGGNY(0.0)GPGGS(0.0)GGS(0.0)GGY(0.0)GGR y:Phosphorylated Y HNRNPA2B1 37486.1 10 5 2.1 134.47 HUMAN 1 0.372 -7.2095 SRNNRFSTPEQAAKN-p P14866;T487-p SRNNRFSTPEQAAKN 0.582849044638515 0.0703153832740153 -0.081 -0.318 4.31372709625456 15.3329465981509 -0.081 -0.318 0.370362741671996 0.0292890536930217 -0.976643599254761 -2.93916160220949 P14866 HNRNPL P14866.T487.p_HNRNPL P14866_T487t _1_1_487_487 P14866 P14866|P14866-2 Heterogeneous nuclear ribonucleoprotein L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11939.11939.2 7.93 6.08 1.113 2 1 1 0 758.8964 1436.815 T487t TMT10 485 (R) FStPEQAAK (N) FS(0.0)T(0.99)PEQAAK K:TMT10,t:Phosphorylated T HNRNPL 64759.2 3 7 846.1 213.74 HUMAN 1 -4.3137 -15.3329 SRNQSHSSPSVSPSR-p Q7Z6E9;S1695-p SRNQSHSSPSVSPSR 0.146674740935683 0.418593254762966 0.254333333333333 -0.0926666666666667 16.9392256042368 5.0327878130095 0.254333333333333 -0.0926666666666667 0.0202337993784679 0.313849339275772 3.25067432400883 -1.10983771309034 Q7Z6E9 RBBP6 Q7Z6E9.S1695.p_RBBP6 Q7Z6E9_S1695sS1699s_2_2_1695_1699 Q7Z6E9 Q7Z6E9|Q7Z6E9-2|Q7Z6E9-4 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4277.4277.2 11.57 11.57 1.164 6 2 2 0 879.8751 1598.8084 S1695s S1699s TMT10 1690 (R) NQSHSsPSVsPSR (S) NQS(0.0)HS(0.0)S(0.99)PS(0.0)VS(0.99)PS(0.0)R s:Phosphorylated S RBBP6 202473.6 1 33 27.1 935.6 HUMAN 1 16.9392 -5.0328 SRNRRSLSPILPGRH-p Q6ZSZ5;S1103-p SRNRRSLSPILPGRH 0.899900791959573 0.0949744769676295 0.0263333333333333 0.263666666666667 0.895955169457491 13.5213070770492 0.0263333333333333 0.263666666666667 0.813587903915847 0.0444497468882584 0.247572317128507 2.60394396158132 Q6ZSZ5 ARHGEF18 Q6ZSZ5.S1103.p_ARHGEF18 Q6ZSZ5_S1103s _1_1_1103_1103 Q6ZSZ5 Q6ZSZ5|Q6ZSZ5-2 Rho guanine nucleotide exchange factor 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20350.20556.2 13.28 5.02 2.756 2 1 1 0 624.8498 1168.7251 S1103s TMT10 1101 (R) SLsPILPGR (H) S(0.0)LS(0.99)PILPGR s:Phosphorylated S ARHGEF18 131234.5 9 7 799.1 223.19 HUMAN 1 0.896 13.5213 SRNTEKRSPKARLLK-p O14645;S25-p SRNTEKRSPKARLLK 0.953803111483038 0.705159099344392 -0.0256666666666667 -0.0423333333333333 0.402285004208059 2.08429644736832 -0.0256666666666666 -0.0423333333333333 0.911531118668086 0.618828569030599 -0.116403221525105 -0.527328023301762 O14645 DNALI1 O14645.S25.p_DNALI1 O14645_S25s _1_1_25_25 O14645 O14645 Axonemal dynein light intermediate polypeptide 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3588.3588.4 8.76 3.7 3.227 2 1 1 0 432.5016 1647.0157 S25s TMT10 20 (R) NTEKRsPK (A) NT(0.0)EKRS(0.99)PK K:TMT10,s:Phosphorylated S DNALI1 29946.7 1 1 4815.1 26.31 HUMAN 1 -0.4023 -2.0843 SRPANKQSPSPSEVS-p P55201-2;S75-p SRPANKQSPSPSEVS 0.138801343205083 0.0205844296633268 0.315666666666667 0.344666666666667 17.5623755102932 23.0752901430494 0.315666666666667 0.344666666666667 0.0175292142404888 0.00492573434450577 3.37423371056584 4.56711174744544 P55201 BRPF1 P55201.2.S75.p_BRPF1 P55201-2_S75s _1_1_75_75 P55201-2 P55201-2|P55201-3|P55201-4 Isoform 2 of Peregrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11881.11881.4 10.23 5.59 1.779 8 1 1 0 982.238 3845.9717 S75s TMT10 67 (R) QSRPANKQsPSPSEVSQSPGREVMSYAQAQR (M) Q(0.0)S(0.0)RPAN(0.0)KQS(0.99)PS(0.0)PS(0.0)EVS(0.0)QS(0.0)PGREVM(0.0)S(0.0)Y(0.0)AQAQR K:TMT10,s:Phosphorylated S BRPF1 139837.6 2 1 723.1 237.03 HUMAN 1 17.5624 23.0753 SRPAPAPSPAPTPAC-p P51606;S416-p SRPAPAPSPAPTPAC 0.41330138595586 0.00884417902096413 0.167333333333333 0.563333333333333 7.08071443402963 29.1020169693579 0.167333333333333 0.563333333333333 0.195852246121711 0.00122969753668655 1.47513458356326 6.15412280397742 P51606 RENBP P51606.S416.p_RENBP P51606_S416s _1_1_416_416 P51606 P51606|A6NKZ2 N-acylglucosamine 2-epimerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31728.31728.4 26.06 26.06 5.346 3 1 1 0 859.1581 3353.6498 S416s TMT10 396 (R) CLAMCEEMLGALLSRPAPAPsPAPTPACR (G) CLAMCEEMLGALLS(0.0)RPAPAPS(0.99)PAPT(0.0)PACR C:Carbamidomethylation,s:Phosphorylated S RENBP 49514.7 1 1 4838.1 26.06 HUMAN 1 7.0807 29.102 SRPKPRPSPSSTREP-p M0QZR4;S832-p SRPKPRPSPSSTREP 0.369943419338104 0.0203847335292588 -0.161666666666667 0.413333333333333 8.00849503149867 23.1456643465938 -0.161666666666667 0.413333333333333 0.158179608695796 0.00484655968424219 -1.63663424560079 4.58377114978505 M0QZR4 NotFound M0QZR4.S832.p_NotFound M0QZR4_S832s _1_1_832_832 M0QZR4 M0QZR4|Q92888-4 Rho guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7978.7978.3 8.7 4.36 7.988 7 1 1 0 897.7719 2611.3386 S832s TMT10 829 (K) PRPsPSSTREPLLSSSENGNGGR (E) PRPS(0.99)PS(0.0)S(0.0)T(0.0)REPLLS(0.0)S(0.0)S(0.0)ENGNGGR s:Phosphorylated S ARHGEF1 109006.6 1 4 2403.1 85.12 HUMAN 1 -8.0085 23.1457 SRPLKPLSPLRAQDM-p O60825;S493-p SRPLKPLSPLRAQDM 0.0495429320354942 0.0375235639276589 0.681 0.442333333333333 28.8923387681265 19.153569384672 0.681 0.442333333333333 0.00129052411177677 0.0121518685089185 6.10206729100835 3.69633228098653 O60825 PFKFB2 O60825.S493.p_PFKFB2 O60825_S493s _1_1_493_493 O60825 O60825 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17643.17643.4 21.43 21.43 2.23 4 1 1 0 817.6703 3187.6934 S493s TMT10 481 (R) NYSVGSRPLKPLsPLRAQDMQEGAD (-) NY(0.0)S(0.0)VGS(0.0)RPLKPLS(0.99)PLRAQDMQEGAD K:TMT10,s:Phosphorylated S PFKFB2 58989.2 11 4 2266.1 90.54 HUMAN 1 28.8923 19.1536 SRPPPSVSPPKCIQM-p Q8NHM5;S1031-p SRPPPSVSPPKCIQM 0.884436508440204 0.303159717781689 0.0243333333333333 -0.163666666666667 1.05295314896477 6.84362146307108 0.0243333333333333 -0.163666666666667 0.784701865552681 0.206841583398933 0.287108927252668 -1.43322411073426 Q8NHM5 KDM2B Q8NHM5.S1031.p_KDM2B Q8NHM5_S1031s _1_1_1031_1031 Q8NHM5 Q8NHM5|Q8NHM5-3|Q8NHM5-2|Q8NHM5-4|A0A0C4DGG3 Lysine-specific demethylase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16047.16047.4 14.8 8.95 1.362 3 1 1 0 679.8671 2636.4781 S1031s TMT10 1022 (R) VISRPPPSVsPPKCIQMER (H) VIS(0.0)RPPPS(0.0)VS(0.99)PPKCIQMER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S KDM2B 155065.3 9 9 800.1 223.19 HUMAN 1 1.053 -6.8436 SRPPSQVSRSGEFPV-p Q5SNT2;S480-p SRPPSQVSRSGEFPV 0.510462225376039 0.00703141473573341 -0.0903333333333333 -0.495 5.39638807219294 30.8419592541032 -0.0903333333333334 -0.495 0.288643108381949 0.000823766401375697 -1.1762278037906 -6.6814545573585 Q5SNT2 TMEM201 Q5SNT2.S480.p_TMEM201 Q5SNT2_S480s _1_1_480_480 Q5SNT2 Q5SNT2 Transmembrane protein 201 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14028.14028.3 9.3 9.3 1.181 6 1 1 0 740.6932 2140.0984 S480s TMT10 464 (R) ADSGYLFSGSRPPSQVsR (S) ADS(0.0)GY(0.0)LFS(0.0)GS(0.0)RPPS(0.0)QVS(0.99)R s:Phosphorylated S TMEM201 73489.5 2 3 2521.1 80.12 HUMAN 1 -5.3964 -30.842 SRPQLRVSPATPKAR-p J3KNZ9;S801-p SRPQLRVSPATPKAR 0.80012376994327 0.737267086860154 -0.0366666666666667 -0.0333333333333333 1.86731721479393 1.82494183596521 -0.0366666666666667 -0.0333333333333333 0.65053142170556 0.656909914256768 -0.479213784405672 -0.469622598289159 J3KNZ9 FBRS J3KNZ9.S801.p_FBRS J3KNZ9_S801s _1_1_801_801 J3KNZ9 J3KNZ9|Q9HAH7-1 Probable fibrosin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15608.15608.5 11.79 6.92 1.534 3 1 1 0 544.5026 2638.5193 S801s TMT10 788 (K) DRDLPFSRPQLRVsPATPK (A) DRDLPFS(0.0)RPQLRVS(0.99)PAT(0.0)PK K:TMT10,s:Phosphorylated S FBRS 104109.7 6 8 767.1 229.08 HUMAN 1 -1.8673 -1.8249 SRPQTGLSFLGPEPE-p P43686;S28-p SRPQTGLSFLGPEPE 0.598806533260307 0.490816286016025 0.0796666666666667 -0.0823333333333333 4.11493792616922 4.13033347883061 0.0796666666666667 -0.0823333333333333 0.387709290010418 0.386337310487623 0.939037297855089 -0.941799040211723 P43686 PSMC4 P43686.S28.p_PSMC4 P43686_S28s _1_1_28_28 P43686 P43686|P43686-2 26S proteasome regulatory subunit 6B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.32922.32922.4 26.19 26.19 2.278 6 1 1 0 985.4868 3858.9599 S28s TMT10 11 (K) AQDEIPALSVSRPQTGLsFLGPEPEDLEDLYSR (Y) AQDEIPALS(0.0)VS(0.0)RPQT(0.0)GLS(0.99)FLGPEPEDLEDLY(0.0)S(0.0)R s:Phosphorylated S PSMC4 47479.5 4 1 4225.1 35.12 HUMAN 1 4.1149 -4.1303 SRPRWGQSPPPQQRS-p Q5VV67;S237-p SRPRWGQSPPPQQRS 0.0990612726298986 0.0399777024253515 -0.441 -0.250666666666667 21.2429710339156 18.7474349814543 -0.441 -0.250666666666667 0.00751108880246532 0.0133430926568446 -4.15092961755753 -3.61203014636552 Q5VV67 PPRC1 Q5VV67.S237.p_PPRC1 Q5VV67_S237s _1_1_237_237 Q5VV67 Q5VV67|Q5VV67-2|E7EVG6 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8559.8559.3 11.65 8.31 99 1 1 1 0 497.2434 1409.7487 S237s TMT10 234 (R) WGQsPPPQQR (S) WGQS(1.0)PPPQQR s:Phosphorylated S PPRC1 179024.3 2 3 1130.1 174.25 HUMAN 1 -21.243 -18.7474 SRPSQLSTPAASPSA-p Q5XUX1;T55-p SRPSQLSTPAASPSA 0.459299895698651 0.0411149475239487 0.12 -0.259333333333333 6.22950853153302 18.5776865670284 0.12 -0.259333333333333 0.238258907931171 0.0138749473332931 1.32534744043833 -3.57708850040936 Q5XUX1 FBXW9 Q5XUX1.T55.p_FBXW9 Q5XUX1_T55tS59s_2_2_55_59 Q5XUX1 Q5XUX1|Q5XUX1-2|Q5XUX1-3|K7EL01 F-box/WD repeat-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16885.16885.4 13.14 13.14 1.111 8 2 2 0 698.3303 2630.3736 T55t S59s TMT10 43 (K) SGLAFSRPSQLStPAAsPSASEPR (A) S(0.0)GLAFS(0.0)RPS(0.0)QLS(0.0)T(0.99)PAAS(0.99)PS(0.0)AS(0.0)EPR t:Phosphorylated T,s:Phosphorylated S FBXW9 54798.8 5 4 2578.1 77.92 HUMAN 1 6.2295 -18.5777 SRPTLEVSPNVCHSN-p P41182;S250-p SRPTLEVSPNVCHSN 0.308639920982799 0.806568783597285 0.150333333333333 0.0296666666666667 9.54284138828538 1.30626610325644 0.150333333333333 0.0296666666666667 0.111100461042548 0.740241432630194 1.90238370064012 0.348994896353373 P41182 BCL6 P41182.S250.p_BCL6 P41182_S250s _1_1_250_250 P41182 P41182|P41182-2 B-cell lymphoma 6 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16305.16305.4 13.44 13.44 1.26 8 1 1 0 1027.4982 4027.0003 S250s Hydrogen 229 (R) ALPCDSARPVPGEYSRPTLEVsPNVCHSNIYSPK (E) ALPCDS(0.0)ARPVPGEY(0.0)S(0.0)RPT(0.0)LEVS(0.99)PNVCHS(0.0)NIY(0.0)S(0.0)PK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S BCL6 80670.9 2 2 557.1 273.04 HUMAN 1 9.5428 1.3063 SRPTSEGSDIESTEP-p Q4G0J3-3;S268-p SRPTSEGSDIESTEP 0.265747257066887 0.106939914528763 0.168333333333333 0.230333333333333 10.9088498720881 12.8270531050117 0.168333333333333 0.230333333333333 0.0811175850466005 0.0521548486563141 2.14014812198958 2.47861068736055 Q4G0J3 LARP7 Q4G0J3.3.S268.p_LARP7 Q4G0J3-3_S268s _1_1_268_268 Q4G0J3-3 Q4G0J3-3 Isoform 3 of La-related protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7170.7170.4 17.83 17.83 2.17 7 1 1 0 780.3865 3038.5668 S268s TMT10 261 (R) SRPTSEGsDIESTEPQKQCSK (K) S(0.0)RPT(0.0)S(0.0)EGS(0.99)DIES(0.0)T(0.0)EPQKQCS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S LARP7 67937.6 8 2 784.1 225.55 HUMAN 1 10.9088 12.8271 SRQAPLPSPESLDLG-p Q12968;S1063-p SRQAPLPSPESLDLG 0.709474629219205 0.042440151419834 -0.0676666666666667 -0.272 2.80361179878759 18.3819308058505 -0.0676666666666667 -0.272 0.524371186925413 0.0145146617479142 -0.680233343050711 -3.53700392199969 Q12968 NFATC3 Q12968.S1063.p_NFATC3 Q12968_S1063s _1_1_1063_1063 Q12968 Q12968 Nuclear factor of activated T-cells, cytoplasmic 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26130.26130.3 12.33 12.33 3.974 3 1 1 0 721.0299 2081.1076 S1063s TMT10 1058 (R) QAPLPsPESLDLGRSDGL (-) QAPLPS(0.99)PES(0.0)LDLGRS(0.0)DGL s:Phosphorylated S NFATC3 117189.4 2 10 1768.2 116.39 HUMAN 1 -2.8036 -18.3819 SRQEAHRSLEQYDQV-p Q9UBC2-2;S560-p SRQEAHRSLEQYDQV 0.485418776358008 0.913314788453894 0.0993333333333333 0.014 5.78331304982504 0.552079180276344 0.0993333333333333 0.014 0.264039374357185 0.880627172736621 1.24586474877897 0.157397316176114 Q9UBC2 EPS15L1 Q9UBC2.2.S560.p_EPS15L1 Q9UBC2-2_S560s _1_1_560_560 Q9UBC2-2 Q9UBC2-2|M0R165|Q9UBC2-3|Q9UBC2-4|M0R2S2 Isoform 2 of Epidermal growth factor receptor substrate 15-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25873.25873.5 26.99 21.27 7.571 6 1 1 0 858.619 4209.101 S560s TMT10 555 (R) QEAHRsLEQYDQVLDGAHGASLTDLANLSEGVSLAER (G) QEAHRS(0.99)LEQY(0.0)DQVLDGAHGAS(0.0)LT(0.0)DLANLS(0.0)EGVS(0.0)LAER s:Phosphorylated S EPS15L1 99718.3 3 10 109.1 576.24 HUMAN 1 5.7833 0.5521 SRQEEMNSQQEEEEM-p Q13435;S289-p SRQEEMNSQQEEEEM 0.130590669739805 0.068566248862505 0.374 0.316666666666667 18.2855606600384 15.4806985714554 0.374 0.316666666666667 0.014840342837026 0.0283093659729873 3.52028951693088 2.96708947806967 Q13435 SF3B2 Q13435.S289.p_SF3B2 Q13435_S289s_1_1_289_289 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3477.3477.3 8.43 8.43 1.404 3 1 1 0 976.0573 2814.1992 M287m S289s M296m TMT10 281 (K) ESRQEEmNsQQEEEEmETDAR (S) ES(0.0)RQEEM(1.0)NS(0.99)QQEEEEM(1.0)ET(0.0)DAR m:Oxidized methionine,s:Phosphorylated S SF3B2 100339.9 1 2 193.1 462.57 HUMAN 1 18.2856 15.4807 SRQENGASVILRDIA-p E9PRY8;S460-p SRQENGASVILRDIA 0.663480609588847 0.842513805318369 -0.118666666666667 -0.02 3.3326826722011 1.046005535811 -0.118666666666667 -0.02 0.464228428976504 0.785958194682115 -0.787210522364652 -0.28535066777906 E9PRY8 NotFound E9PRY8.S460.p_NotFound E9PRY8_S460s _1_1_460_460 E9PRY8 E9PRY8|P29692-2|A0A087X1X7|P29692-4|E9PMW7 Elongation factor 1-delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22296.22296.3 9.18 9.18 99 1 1 1 0 617.6641 1771.0024 S460s TMT10 455 (R) QENGAsVILRDIAR (A) QENGAS(1.0)VILRDIAR s:Phosphorylated S EEF1D 77196.2 1 4 369.1 339.47 HUMAN 1 -3.3327 -1.046 SRQHNCGTPLPVSSE-p Q9NV70-2;T553-p SRQHNCGTPLPVSSE 0.731724827574726 0.0105470640095902 -0.0696666666666667 0.410666666666667 2.57326482431515 27.7214338617777 -0.0696666666666667 0.410666666666667 0.552934282609331 0.00168988290968922 -0.632319955913418 5.75949708588551 Q9NV70 EXOC1 Q9NV70.2.T553.p_EXOC1 Q9NV70-2_T553t _1_1_553_553 Q9NV70-2 Q9NV70|Q9NV70-2 Isoform 2 of Exocyst complex component 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8165.8165.3 16.51 14.49 5.391 3 1 1 0 698.0151 2012.0635 T553t TMT10 548 (R) QHNCGtPLPVSSEK (D) QHNCGT(0.99)PLPVS(0.0)S(0.0)EK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T EXOC1 101136.7 1 11 871.2 209.68 HUMAN 1 -2.5733 27.7214 SRQLSSTSPLAPYPT-p Q6UUV7;S413-p SRQLSSTSPLAPYPT 0.517157142456752 0.910657182467651 -0.124333333333333 -0.0116666666666666 5.28821075816612 0.56923595019562 -0.124333333333333 -0.0116666666666666 0.295923138372982 0.877155124566722 -1.1566216944597 -0.162022256299022 Q6UUV7 CRTC3 Q6UUV7.S413.p_CRTC3 Q6UUV7_S413s _1_1_413_413 Q6UUV7 Q6UUV7|Q6UUV7-3 CREB-regulated transcription coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20076.20076.2 12.26 9.41 1.145 9 1 1 0 1281.1121 2481.2493 S413s TMT10 408 (R) QLSSTsPLAPYPTSQMVSSDR (S) QLS(0.0)S(0.0)T(0.0)S(0.99)PLAPY(0.0)PT(0.0)S(0.0)QMVS(0.0)S(0.0)DR s:Phosphorylated S CRTC3 67129.2 3 6 1297.1 156.77 HUMAN 1 -5.2882 -0.5692 SRQRKSLSNPDIASE-p Q96PE2;S463-p SRQRKSLSNPDIASE 0.885836864663405 0.0163876653619381 0.025 0.354 1.03469092824064 24.6568795341005 0.025 0.354 0.788008509186679 0.00342225247768137 0.282557786553351 4.95132693630938 Q96PE2 ARHGEF17 Q96PE2.S463.p_ARHGEF17 Q96PE2_S463s _1_1_463_463 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37620.37620.3 26.4 26.4 1.102 6 1 1 0 796.0876 2306.2805 S463s TMT10 461 (K) SLsNPDIASETLTLLSFLR (S) S(0.0)LS(0.99)NPDIAS(0.0)ET(0.0)LT(0.0)LLS(0.0)FLR s:Phosphorylated S ARHGEF17 223779.6 5 16 30.1 908.19 HUMAN 1 1.0347 24.6569 SRQRSGWSSGRSGRS-p Q9BQ39;S683-p SRQRSGWSSGRSGRS 0.240293144810692 0.965904172025541 0.172333333333333 0.00666666666666667 11.8387354366006 0.215483573962709 0.172333333333333 0.00666666666666667 0.0654826816480203 0.951593885070566 2.30376302144917 0.0635654919058359 Q9BQ39 DDX50 Q9BQ39.S683.p_DDX50 Q9BQ39_S683s _1_1_683_683 Q9BQ39 Q9BQ39|A0A087WVC1 ATP-dependent RNA helicase DDX50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6134.6134.2 8.26 3.95 1.26 3 1 1 0 523.2369 965.5002 S683s TMT10 680 (R) SGWsSGR (S) S(0.0)GWS(0.99)S(0.0)GR s:Phosphorylated S DDX50 83134.1 3 9 103.2 590.75 HUMAN 1 11.8387 0.2155 SRQVRQRSPDIFQEA-p Q8TBB1;S468-p SRQVRQRSPDIFQEA 0.683561892694876 0.756036718889476 0.058 0.034 3.09777208620209 1.67996233157845 0.058 0.034 0.490030138454866 0.679209523698184 0.740201901986837 0.436652268483974 Q8TBB1 LNX1 Q8TBB1.S468.p_LNX1 Q8TBB1_S468s _1_1_468_468 Q8TBB1 Q8TBB1|Q8TBB1-2 E3 ubiquitin-protein ligase LNX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21310.21310.3 15.86 15.86 6.944 4 1 1 0 1023.4655 2988.4186 S468s TMT10 466 (R) QRsPDIFQEAGWNSNGSWSPGPGER (S) QRS(0.99)PDIFQEAGWNS(0.0)NGS(0.0)WS(0.0)PGPGER s:Phosphorylated S LNX1 81939.3 2 2 3395.1 52.13 HUMAN 1 3.0978 1.68 SRRALMGSPQLVAAV-p P14923;S182-p SRRALMGSPQLVAAV 0.564000583108555 0.0177757786902377 0.0913333333333333 0.334 4.5809864780571 24.1116157025416 0.0913333333333333 0.334 0.348258200953646 0.00388005989555523 1.02667959641944 4.81650327999487 P14923 JUP P14923.S182.p_JUP P14923_S182s _1_1_182_182 P14923 P14923 Junction plakoglobin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27266.27266.2 17.53 17.53 99 1 1 1 0 860.9734 1640.9719 S182s TMT10 178 (R) ALMGsPQLVAAVVR (T) ALMGS(1.0)PQLVAAVVR s:Phosphorylated S JUP 82485 9 6 957.1 195.02 HUMAN 1 4.581 24.1116 SRRFGDSSDSDNGFS-p Q8IU60;S247-p SRRFGDSSDSDNGFS 0.918430174900821 0.0472979764810446 0.015 0.242 0.72061400442639 17.7301367859858 0.015 0.242 0.84710764181263 0.0168649990631982 0.202250291764445 3.40511950420719 Q8IU60 DCP2 Q8IU60.S247.p_DCP2 Q8IU60_S246sS247s_2_2_246_247 Q8IU60 Q8IU60|Q8IU60-2 m7GpppN-mRNA hydrolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15730.15730.3 11.85 11.85 1.241 9 2 2 0 1174.5542 3361.7115 S246s S247s TMT10 242 (R) RFGDssDSDNGFSSTGSTPAKPTVEK (L) RFGDS(0.99)S(0.99)DS(0.0)DNGFS(0.0)S(0.0)T(0.0)GS(0.0)T(0.0)PAKPT(0.0)VEK K:TMT10,s:Phosphorylated S DCP2 49026.8 5 6 1279.1 158.9 HUMAN 2 0.7206 17.7301 SRRGCPVSPPGWELS-p Q8IYL2;S533-p SRRGCPVSPPGWELS 0.530635019877545 0.070330473070744 0.105 -0.222 5.0930795131313 15.3313100797333 0.105 -0.222 0.309522374693884 0.0293000925410551 1.12108837719846 -2.9388528044129 Q8IYL2 TRMT44 Q8IYL2.S533.p_TRMT44 Q8IYL2_S533s _1_1_533_533 Q8IYL2 Q8IYL2|Q8IYL2-2|Q8IYL2-3 Probable tRNA (uracil-O(2)-)-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20911.20911.3 15.36 11.57 14.806 3 1 1 0 677.9918 1951.9897 S533s TMT10 529 (R) GCPVsPPGWELSPSPR (W) GCPVS(0.99)PPGWELS(0.0)PS(0.0)PR C:Carbamidomethylation,s:Phosphorylated S TRMT44 85996.6 1 1 5919.1 15.36 HUMAN 1 5.0931 -15.3313 SRRGRNSSGPQSGWM-p Q99590;S1170-p SRRGRNSSGPQSGWM 0.3728639655768 0.0729754826063382 -0.136333333333333 -0.201666666666667 7.94916775573377 15.0991934479982 -0.136333333333333 -0.201666666666667 0.160355265216666 0.0309086940145212 -1.62634130810114 -2.89517120846222 Q99590 SCAF11 Q99590.S1170.p_SCAF11 Q99590_S1170s _1_1_1170_1170 Q99590 Q99590|F8VXG7|Q99590-2 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15200.15200.2 8.48 8.48 1.15 3 1 1 0 858.9152 1636.8517 S1170s TMT10 1168 (R) NSsGPQSGWMK (Q) NS(0.0)S(0.99)GPQS(0.0)GWMK K:TMT10,s:Phosphorylated S SCAF11 166418 3 25 120.1 549.85 HUMAN 1 -7.9492 -15.0992 SRRGRSPSPKPRGLQ-p Q9UQ35;S1764-p SRRGRSPSPKPRGLQ 0.0782221681558717 0.057381518122085 0.447333333333333 0.247333333333333 23.6321940151681 16.5373166702174 0.447333333333333 0.247333333333333 0.00433291928050383 0.0221956737705176 4.70548804408582 3.16971917032778 Q9UQ35 SRRM2 Q9UQ35.S1764.p_SRRM2 Q9UQ35_S1762sS1764s_2_2_1762_1764 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3089.3089.3 7.43 7.43 99 2 2 2 0 457.556 1210.7218 S1762s S1764s Hydrogen 1760 (R) GRsPsPKPR (G) GRS(1.0)PS(1.0)PKPR K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 23 225 2.1 3310.34 HUMAN 1 23.6322 16.5373 SRRGSDASDFDISEI-p F6QMI7;S5480-p SRRGSDASDFDISEI 0.208094276358716 0.105601644993366 0.229 0.199333333333333 13.1472968937067 12.8980812477163 0.229 0.199333333333333 0.048447381667236 0.0513088020848788 2.53764322599333 2.49136371011254 F6QMI7 DST F6QMI7.S5480.p_DST F6QMI7_S5477sS5480s_2_2_5477_5480 F6QMI7 Q03001|F8W9J4|F6QMI7 Dystonin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21007.21007.5 22.33 22.33 3.343 8 2 2 0 795.9605 3815.8456 S5477s S5480s TMT10 5475 (R) RGsDAsDFDISEIQSVCSDVETVPQTHRPTPR (A) RGS(0.99)DAS(0.99)DFDIS(0.0)EIQS(0.0)VCS(0.0)DVET(0.0)VPQT(0.0)HRPT(0.0)PR C:Carbamidomethylation,s:Phosphorylated S DST 636850.7 2 13 796.2 223.72 HUMAN 1 13.1473 12.8981 SRRGSIDSPKSYIFK-p P15822;S782-p SRRGSIDSPKSYIFK 0.0722929672835505 0.00292360520383369 -0.745 -0.903333333333333 24.5166985781729 38.2500619437734 -0.745 -0.903333333333333 0.00353451754813037 0.000149621431531637 -4.92240364882532 -9.37145238289463 P15822 HIVEP1 P15822.S782.p_HIVEP1 P15822_S782s _1_1_782_782 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5371.5371.3 7.31 4.16 4.733 2 1 1 0 466.5906 1317.7891 S782s TMT10 777 (R) RGSIDsPK (S) RGS(0.0)IDS(0.99)PK K:TMT10,s:Phosphorylated S HIVEP1 299483.8 1 12 82.1 631.69 HUMAN 1 -24.5167 -38.2501 SRRHSKRSHDSDDSD-p Q9UKJ3;S908-p SRRHSKRSHDSDDSD 0.832987870919974 0.124613600022768 0.0626666666666666 0.230666666666667 1.5330666232842 11.9290589388265 0.0626666666666667 0.230666666666667 0.702576044429744 0.0641348533639172 0.402720000529162 2.31860907501145 Q9UKJ3 GPATCH8 Q9UKJ3.S908.p_GPATCH8 Q9UKJ3_S908sS911sS914s_3_3_908_914 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5463.5463.2 7.43 7.43 3.306 6 3 3 0 941.8045 1642.703 S908s S911s S914s Hydrogen 908 (R) sHDsDDsDYASSK (H) S(0.99)HDS(0.99)DDS(0.99)DY(0.0)AS(0.0)S(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S GPATCH8 165107.3 4 23 231.1 422.52 HUMAN 1 1.5331 11.9291 SRRIPVLSPKPAVAP-p Q6PJT7;S665-p SRRIPVLSPKPAVAP 0.939260732855294 0.0619237436116897 0.0126666666666667 -0.251666666666667 0.532040636496124 16.08238926148 0.0126666666666667 -0.251666666666667 0.884699814784972 0.0246468302427151 0.151991603127859 -3.08183437840049 Q6PJT7 ZC3H14 Q6PJT7.S665.p_ZC3H14 Q6PJT7_S665s _1_1_665_665 Q6PJT7 Q6PJT7|Q6PJT7-5|G3V256|Q6PJT7-4|Q6PJT7-10 Zinc finger CCCH domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19850.19850.4 18.22 18.22 18.223 4 1 1 0 766.6814 2983.7279 S665s TMT10 660 (R) RIPVLsPKPAVAPPAPPSSSQLCR (Y) RIPVLS(0.99)PKPAVAPPAPPS(0.0)S(0.0)S(0.0)QLCR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZC3H14 83844.1 1 20 420.1 320.31 HUMAN 1 0.532 -16.0824 SRRIPVLSPKPVAPP-p Q6PJT7-2;S665-p SRRIPVLSPKPVAPP 0.566681058099023 0.0130644957520201 -0.152666666666667 -0.620666666666667 4.54469029676722 26.2366498805611 -0.152666666666667 -0.620666666666667 0.351180966971902 0.00237867447314029 -1.01991742924784 -5.35683510420858 Q6PJT7 ZC3H14 Q6PJT7.2.S665.p_ZC3H14 Q6PJT7-2_S665s _1_1_665_665 Q6PJT7-2 Q6PJT7-2|Q6PJT7-9 Isoform 2 of Zinc finger CCCH domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20025.20025.4 14.13 12.1 13.413 4 1 1 0 748.9203 2912.6908 S665s TMT10 660 (R) RIPVLsPKPVAPPAPPSSSQLCR (Y) RIPVLS(0.99)PKPVAPPAPPS(0.0)S(0.0)S(0.0)QLCR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZC3H14 83773.1 1 23 420.2 320.31 HUMAN 1 -4.5447 -26.2366 SRRKRSKSEDMDNVQ-p Q6VMQ6-4;S567-p SRRKRSKSEDMDNVQ 0.036022948076598 0.0498909852909006 -0.730333333333333 -0.267 33.4378251406867 17.4080484219819 -0.730333333333333 -0.267 0.000453124438690238 0.0181633167974031 -7.55022482328541 -3.3408181927239 Q6VMQ6 ATF7IP Q6VMQ6.4.S567.p_ATF7IP Q6VMQ6-4_S567s _1_1_567_567 Q6VMQ6-4 Q6VMQ6-4|Q6VMQ6-5|Q6VMQ6-2 Isoform 3 of Activating transcription factor 7-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8693.8693.2 13.13 10.31 1.111 3 1 1 0 1068.0369 2055.0995 S567s TMT10 565 (R) SKsEDMDNVQSK (R) S(0.0)KS(0.99)EDMDNVQS(0.0)K K:TMT10,s:Phosphorylated S ATF7IP 138346.3 1 11 273.1 392.91 HUMAN 1 -33.4378 -17.408 SRRLLNQSEGSRETL-p Q6ZU80;S298-p SRRLLNQSEGSRETL 0.665544717655066 0.126516872107044 -0.0723333333333333 0.163 3.30661166152761 11.8361200706654 -0.0723333333333334 0.163 0.46702360711876 0.0655221278671264 -0.78202931555931 2.30216990276207 Q6ZU80 CEP128 Q6ZU80.S298.p_CEP128 Q6ZU80_S298s _1_1_298_298 Q6ZU80 Q6ZU80|Q6ZU80-1|Q6ZU80-3 Centrosomal protein of 128 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22312.22312.4 12.15 12.15 1.301 3 1 1 0 665.8462 2580.3943 S298s TMT10 294 (R) LLNQsEGSRETLLHQVEELR (T) LLNQS(0.99)EGS(0.0)RET(0.0)LLHQVEELR s:Phosphorylated S CEP128 128640.5 2 6 1261.1 161 HUMAN 1 -3.3066 11.8361 SRRLRRVSLSEIGFG-p Q00536-2;S227-p SRRLRRVSLSEIGFG 0.0576036189507777 0.820909691132117 -0.557666666666667 0.0316666666666667 27.040571777115 1.19950422150914 -0.557666666666667 0.0316666666666667 0.00197670937625027 0.758664177076487 -5.57985808007208 0.323166775603617 Q00536 CDK16 Q00536.2.S227.p_CDK16 Q00536-2_S227s _1_1_227_227 Q00536-2 Q00536-2|Q00536-3|A0A087WZU2 Isoform 2 of Cyclin-dependent kinase 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28382.28382.3 18.06 18.06 2.288 4 1 1 0 826.7989 2398.411 S227s Hydrogen 225 (R) RVsLSEIGFGKLETYIK (L) RVS(0.99)LS(0.0)EIGFGKLET(0.0)Y(0.0)IK K:TMT10-Lys-Only,s:Phosphorylated S CDK16 63855.9 15 8 672.1 248.68 HUMAN 1 -27.0406 1.1995 SRRNTSASDEDERMS-p Q32MZ4-2;S68-p SRRNTSASDEDERMS 0.68947209990526 0.429461806401683 -0.063 0.0903333333333333 3.02698481481493 4.88743139154458 -0.063 0.0903333333333334 0.498082769909089 0.324531502794197 -0.725887908707919 1.08317361921065 Q32MZ4 LRRFIP1 Q32MZ4.2.S68.p_LRRFIP1 Q32MZ4-2_S68s _1_1_68_68 Q32MZ4-2 Q32MZ4|Q32MZ4-2|Q32MZ4-4 Isoform 2 of Leucine-rich repeat flightless-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5941.5941.2 10.4 10.4 3.13 5 1 1 0 1025.4417 1969.9083 S68s TMT10 64 (R) NTSAsDEDERMSVGSR (G) NT(0.0)S(0.0)AS(0.99)DEDERMS(0.0)VGS(0.0)R s:Phosphorylated S LRRFIP1 87029.9 4 3 235.1 419.93 HUMAN 1 -3.027 4.8874 SRRQHRDSPEILSRS-p Q96Q42;S1335-p SRRQHRDSPEILSRS 0.0746534951971481 0.283131518318113 0.745333333333333 0.141333333333333 24.1337192139202 7.22517142679135 0.745333333333334 0.141333333333333 0.00386036241487935 0.189444873429582 4.82766766029978 1.49994571677019 Q96Q42 ALS2 Q96Q42.S1335.p_ALS2 Q96Q42_S1335s _1_1_1335_1335 Q96Q42 Q96Q42 Alsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4101.4101.4 8.86 8.86 8.857 2 1 1 0 451.4865 1722.9561 S1335s TMT10 1330 (R) RQHRDsPEILSR (S) RQHRDS(0.99)PEILS(0.0)R s:Phosphorylated S ALS2 185455.9 2 6 1001.1 189.97 HUMAN 1 24.1337 7.2252 SRRQRSVSPYSRRRS-p Q9NYV4-2;S303-p SRRQRSVSPYSRRRS 0.288407607200218 0.20297037548925 0.171 0.137333333333333 10.1831598100375 9.10991449614398 0.171 0.137333333333333 0.0958702851251273 0.122746339720813 2.01355030979735 1.82672549241454 Q9NYV4 CDK12 Q9NYV4.2.S303.p_CDK12 Q9NYV4-2_S301sS303s_2_2_301_303 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5080.5080.2 7.61 7.61 2.615 4 2 2 0 611.7375 1079.5592 Q299q S301s S303s Hydrogen 299 (R) qRsVsPYSR (R) Q(1.0)RS(0.99)VS(0.99)PY(0.0)S(0.0)R q:Pyroglutamic acid,s:Phosphorylated S CDK12 163853.1 3 38 59.1 708.76 HUMAN 1 10.1832 9.1099 SRRRFSDSEGEETVP-p Q13286;S14-p SRRRFSDSEGEETVP 0.271709690894866 0.0480332831393178 0.173666666666667 0.326333333333333 10.7245029568399 17.6320625089716 0.173666666666667 0.326333333333333 0.0846349426616749 0.0172501846849234 2.10791160496559 3.38548039957706 Q13286 CLN3 Q13286.S14.p_CLN3 Q13286_S12sS14s_2_2_12_14 Q13286 Q13286|Q13286-3|Q13286-7|A0A1B0GWD3|Q13286-2|A0A1B0GV71|A0A1B0GW34|A0A0D9SFH9|Q13286-6|Q13286-4|Q13286-5|Q9UBD8|H3BR00|Q9UP10|Q9UBH5|A0A0D9SF04|A0A1B0GWH8 Battenin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12107.12107.3 12.09 12.09 2.713 3 2 2 0 708.6353 1963.9559 S12s S14s TMT10 10 (R) RFsDsEGEETVPEPR (L) RFS(0.99)DS(0.99)EGEET(0.0)VPEPR s:Phosphorylated S CLN3 48192.6 5 2 4018.1 39.04 HUMAN 1 10.7245 17.6321 SRRRKAEYPRRRRSS-p Q96JP5;Y76-p SRRRKAEYPRRRRSS 0.523422472937247 0.00553211891335055 0.096 -0.763 5.20049000651919 32.7257369414456 0.096 -0.763 0.30196110039955 0.000533858676989871 1.14067524626243 -7.29329161375975 Q96JP5 ZFP91 Q96JP5.Y76.p_ZFP91 Q96JP5_Y76y _1_1_76_76 Q96JP5 Q96JP5|Q96JP5-2 E3 ubiquitin-protein ligase ZFP91 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.3743.3743.3 7.9 7.9 99 1 1 1 0 410.2174 1148.6738 Y76y Hydrogen 73 (R) KAEyPRR (R) KAEY(1.0)PRR K:TMT10-Lys-Only,y:Phosphorylated Y ZFP91 64299.7 3 1 413.1 7.9 HUMAN 1 5.2005 -32.7257 SRRRRGRSRTPPTSR-p Q9UQ35;S1842-p SRRRRGRSRTPPTSR 0.375318981258391 0.183313099831904 0.251333333333333 0.290666666666667 7.87564108485713 9.69301754870648 0.251333333333333 0.290666666666667 0.163093214101256 0.107324344621179 1.61358001998486 1.92767024363887 Q9UQ35 SRRM2 Q9UQ35.S1842.p_SRRM2 Q9UQ35_S1842sT1844t_2_2_1842_1844 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.1643.1992.2 9.38 9.38 6.086 4 2 2 0 531.2123 901.485 S1842s T1844t Hydrogen 1842 (R) sRtPPTSR (K) S(0.99)RT(0.99)PPT(0.0)S(0.0)R s:Phosphorylated S,t:Phosphorylated T SRRM2 300351.7 10 227 2.1 3310.34 HUMAN 1 7.8756 9.693 SRRSRRASLSEIGFG-p Q00537-2;S180-p SRRSRRASLSEIGFG 0.237800187730078 0.280365597732147 -0.195 0.109666666666667 11.9523889045815 7.27779536147381 -0.195 0.109666666666667 0.0637912495940773 0.187163200849863 -2.32389255028268 1.50912388644633 Q00537 CDK17 Q00537.2.S180.p_CDK17 Q00537-2_S180s _1_1_180_180 Q00537-2 Q00537|Q00537-2|F5H6Z0 Isoform 2 of Cyclin-dependent kinase 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17934.17934.2 11.65 11.65 2.194 2 1 1 0 851.9673 1622.963 S180s TMT10 178 (R) RAsLSEIGFGK (M) RAS(0.99)LS(0.0)EIGFGK K:TMT10,s:Phosphorylated S CDK17 59872.4 4 17 672.2 248.68 HUMAN 1 -11.9524 7.2778 SRRSRSESETSTMAA-p Q5BIX2;S147-p SRRSRSESETSTMAA 0.839563064744646 0.112087156847555 -0.0393333333333334 -0.218666666666667 1.46660298453729 12.5443020360597 -0.0393333333333334 -0.218666666666667 0.713410835988897 0.0556634084923165 -0.387146025159124 -2.427990917979 Q5BIX2 C18orf25 Q5BIX2.S147.p_C18orf25 Q5BIX2_S147s _1_1_147_147 Q5BIX2 Q5BIX2|Q96B23|Q96B23-2|A0A087WVF1 Chromosome 18 open reading frame 25, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9475.9475.3 10.71 10.71 2.115 5 1 1 0 679.6908 1957.0879 S147s TMT10 145 (R) SEsETSTMAAKK (N) S(0.0)ES(0.99)ET(0.0)S(0.0)T(0.0)MAAKK K:TMT10,s:Phosphorylated S C18orf25 43622.5 2 3 1972.1 104.68 HUMAN 1 -1.4666 -12.5443 SRRSRSRSPGSYKQR-p Q86X95;S394-p SRRSRSRSPGSYKQR 0.942896336607154 0.0377964801348101 0.0106666666666667 0.287333333333333 0.502044606914401 19.1052210553425 0.0106666666666667 0.287333333333333 0.890831446515706 0.0122879063969843 0.143840626473409 3.68624391190399 Q86X95 CIR1 Q86X95.S394.p_CIR1 Q86X95_S394s _1_1_394_394 Q86X95 Q86X95 Corepressor interacting with RBPJ 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5308.5308.2 8.09 8.09 2.093 4 1 1 0 710.3717 1339.7734 S394s TMT10 392 (R) SRsPGSYK (Q) S(0.0)RS(0.99)PGS(0.0)Y(0.0)K K:TMT10,s:Phosphorylated S CIR1 52597.6 3 4 2295.1 89.34 HUMAN 1 0.502 19.1052 SRSAIRHSPSKCRLH-p O94964-2;S1637-p SRSAIRHSPSKCRLH 0.10892597518252 0.00273649503124045 0.350666666666667 -0.829666666666667 20.1723124178154 38.8614562629165 0.350666666666667 -0.829666666666667 0.00961100400483667 0.000129973368224983 3.91602843806379 -9.63086775530455 O94964 SOGA1 O94964.2.S1637.p_SOGA1 O94964-2_S1637s _1_1_1637_1637 O94964-2 O94964-2 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3587.3587.3 8.24 5.26 8.235 3 1 1 0 507.6177 1440.8687 S1637s TMT10 1632 (R) SAIRHsPSK (C) S(0.0)AIRHS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S SOGA1 185623.3 3 24 215.1 433.51 HUMAN 1 20.1723 -38.8615 SRSDRKRSISESSRS-p Q9H307;S690-p SRSDRKRSISESSRS 0.0209641296673791 0.486903178516635 -1.088 -0.125333333333333 39.1629827783197 4.17613257672147 -1.088 -0.125333333333333 0.000121255576887721 0.382284546418696 -9.78317082044837 -0.950485058774213 Q9H307 PNN Q9H307.S690.p_PNN Q9H307_S690s _1_1_690_690 Q9H307 Q9H307|Q9H307-2 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.3596.3596.4 9.07 9.07 9.073 4 1 1 0 397.7211 1507.8957 S690s TMT10 688 (R) KRsISESSR (S) KRS(0.99)IS(0.0)ES(0.0)S(0.0)R K:TMT10,s:Phosphorylated S PNN 81726.4 2 11 180.1 480.36 HUMAN 1 -39.163 -4.1761 SRSGEDESQEDVLMD-p Q7Z6Z7;S2377-p SRSGEDESQEDVLMD 0.893320455257628 0.143220511057626 0.0203333333333333 0.225666666666667 0.956909485413713 11.1195608041757 0.0203333333333333 0.225666666666667 0.802248754384575 0.077275872913405 0.263034423035759 2.17607533655979 Q7Z6Z7 HUWE1 Q7Z6Z7.S2377.p_HUWE1 Q7Z6Z7_S2377s _1_1_2377_2377 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22017.22029.3 21.51 21.51 2.376 6 1 1 0 1144.1761 3350.5492 S2377s TMT10 2372 (R) SGEDEsQEDVLMDEAPSNLSQASTLQANR (E) S(0.0)GEDES(0.99)QEDVLMDEAPS(0.0)NLS(0.0)QAS(0.0)T(0.0)LQANR s:Phosphorylated S HUWE1 485818.9 1 28 11.1 1210.45 HUMAN 1 0.9569 11.1196 SRSGLYRSPSMPENL-p P30307;S214-p SRSGLYRSPSMPENL 0.536318608089857 0.0498849855635403 0.087 -0.309333333333333 5.00647567153846 17.4105569760229 0.087 -0.309333333333333 0.315756596963996 0.0181528284059926 1.10524467767828 -3.34131683329855 P30307 CDC25C P30307.S214.p_CDC25C P30307_S214s _1_1_214_214 P30307 P30307|P30307-2|P30307-3|P30307-4 M-phase inducer phosphatase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11415.11415.4 15.63 15.63 2.544 4 1 1 0 571.5372 2203.1603 S214s TMT10 209 (R) SGLYRsPSMPENLNRPR (L) S(0.0)GLY(0.0)RS(0.99)PS(0.0)MPENLNRPR s:Phosphorylated S CDC25C 54219.5 7 4 1847.1 111.23 HUMAN 1 5.0065 -17.4106 SRSKRKPSIVTKYVE-p P46100;S84-p SRSKRKPSIVTKYVE 0.26302157440141 0.00695764759433468 -0.204333333333333 0.734 11.0040063714731 30.9298050008745 -0.204333333333333 0.734 0.0793595803921699 0.000807271276083278 -2.15681124214216 6.70901282206033 P46100 ATRX P46100.S84.p_ATRX P46100_S84s _1_1_84_84 P46100 P46100|P46100-4|P46100-6|A0A087WWG0 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8749.8749.4 7.06 2.08 1.98 2 1 1 0 424.7678 1616.0826 S84s TMT10 81 (K) RKPsIVTK (Y) RKPS(0.99)IVT(0.0)K K:TMT10,s:Phosphorylated S ATRX 285034.2 2 4 18.1 1035.36 HUMAN 1 -11.004 30.9298 SRSKSLPSPHPVRYF-p Q02224;S2654-p SRSKSLPSPHPVRYF 0.862721178211236 0.170938743396236 0.0273333333333333 -0.175333333333333 1.2512380261134 10.0855143421119 0.0273333333333333 -0.175333333333333 0.749680470420575 0.0980502184955812 0.335763466164822 -1.99575636780968 Q02224 CENPE Q02224.S2654.p_CENPE Q02224_S2654s _1_1_2654_2654 Q02224 Q02224|Q02224-2|A0A087X0P0|Q02224-3 Centromere-associated protein E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8296.8296.3 9.79 9.79 1.247 2 1 1 0 433.5658 1218.7156 S2654s TMT10 2651 (K) SLPsPHPVR (Y) S(0.0)LPS(0.99)PHPVR s:Phosphorylated S CENPE 317778.9 2 6 2732.1 72.4 HUMAN 1 1.2512 -10.0855 SRSLDMDSIIAEVKA-p P05787;S258-p SRSLDMDSIIAEVKA 0.506609842161293 0.0154604915090575 0.0953333333333333 0.362666666666667 5.44842668970885 25.0399778140928 0.0953333333333333 0.362666666666667 0.285205128752809 0.00313330173072752 1.18563691463875 5.04759588760678 P05787 KRT8 P05787.S258.p_KRT8 P05787_S258s _1_1_258_258 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36683.36683.3 20.45 20.45 5.851 3 1 1 0 973.8239 2839.4912 S258s TMT10 253 (R) SLDMDsIIAEVKAQYEDIANR (S) S(0.0)LDMDS(0.99)IIAEVKAQY(0.0)EDIANR K:TMT10,s:Phosphorylated S KRT8 53703.3 21 20 69.1 672.47 HUMAN 1 5.4484 25.04 SRSLDQDSPSKKKKF-p Q2LD37;S3835-p SRSLDQDSPSKKKKF 0.674553852682581 0.626868071044996 0.0603333333333333 0.0483333333333334 3.20456645331374 2.75806859542149 0.0603333333333333 0.0483333333333334 0.478127094149262 0.529899049443005 0.761664424324245 0.670739958672003 Q2LD37 KIAA1109 Q2LD37.S3835.p_KIAA1109 Q2LD37_S3835s _1_1_3835_3835 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8540.8540.2 12.27 12.27 1.698 3 1 1 0 757.8788 1434.784 S3835s TMT10 3830 (R) SLDQDsPSK (K) S(0.0)LDQDS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S KIAA1109 559693.9 3 22 143.1 520.8 HUMAN 1 3.2046 2.7581 SRSLECRSDPESPIK-p Q8NDI1;S747-p SRSLECRSDPESPIK 0.335167066678141 0.0940306432368947 -0.178666666666667 -0.695333333333333 8.85638940418689 13.5782193784263 -0.178666666666667 -0.695333333333334 0.130125094999598 0.043871053365884 -1.78350347920584 -2.61428834089163 Q8NDI1 EHBP1 Q8NDI1.S747.p_EHBP1 Q8NDI1_S747s _1_1_747_747 Q8NDI1 Q8NDI1|Q8NDI1-2|Q8NDI1-3 EH domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7860.7860.2 9.62 5.35 1.102 2 1 1 0 769.916 1458.8568 S747s Hydrogen 747 (R) sDPESPIKK (T) S(0.99)DPES(0.0)PIKK K:TMT10-Lys-Only,s:Phosphorylated S EHBP1 140642.4 1 10 285.1 385.52 HUMAN 1 -8.8564 -13.5782 SRSPIIHSPKRRDRR-p O94913;S494-p SRSPIIHSPKRRDRR 0.749370336137999 0.126996152163108 -0.05 0.191666666666667 2.38432653751591 11.8139223886274 -0.05 0.191666666666667 0.577520422132511 0.0658578822299926 -0.592326632643015 2.29824660902628 O94913 PCF11 O94913.S494.p_PCF11 O94913_S494s _1_1_494_494 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6370.6370.2 14.93 14.93 3.415 2 1 1 0 594.3232 1107.6724 S494s Hydrogen 489 (R) SPIIHsPK (R) S(0.0)PIIHS(0.99)PK K:TMT10-Lys-Only,s:Phosphorylated S PCF11 173731.7 5 6 508.1 288.88 HUMAN 1 -2.3843 11.8139 SRSPKSRSPIIHSPK-p O94913;S489-p SRSPKSRSPIIHSPK 0.295056491016786 0.0128547487809768 0.157333333333333 0.533666666666667 9.99833721769909 26.3418237421342 0.157333333333333 0.533666666666667 0.100038294307788 0.00232176160928209 1.98142157134991 5.38465025538923 O94913 PCF11 O94913.S489.p_PCF11 O94913_S489s _1_1_489_489 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7439.7439.2 17.24 17.24 10.067 2 1 1 0 594.324 1107.6724 S489s Hydrogen 489 (R) sPIIHSPK (R) S(0.99)PIIHS(0.0)PK K:TMT10-Lys-Only,s:Phosphorylated S PCF11 173731.7 5 5 508.1 288.88 HUMAN 1 9.9983 26.3418 SRSPRTQSPGGCSAE-p Q96MH2;S76-p SRSPRTQSPGGCSAE 0.396714483859368 0.0474260898983612 0.149333333333333 0.393666666666667 7.41274650806007 17.7133233532136 0.149333333333333 0.393666666666667 0.181436788119937 0.0169304173768422 1.53308624107605 3.40174891673642 Q96MH2 HEXIM2 Q96MH2.S76.p_HEXIM2 Q96MH2_S76s _1_1_76_76 Q96MH2 Q96MH2 Protein HEXIM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13487.13487.3 14.4 6.71 2.152 3 1 1 0 724.0409 2090.1428 S76s TMT10 74 (R) TQsPGGCSAEAVLARK (K) T(0.0)QS(0.99)PGGCS(0.0)AEAVLARK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HEXIM2 32760.3 6 12 1285.1 158.28 HUMAN 1 7.4127 17.7133 SRSPYSRSPYSRSRY-p Q9BRL6;S163-p SRSPYSRSPYSRSRY 0.407878856431238 0.30612227168724 0.128666666666667 0.160666666666667 7.1853437404733 6.79203206477363 0.128666666666667 0.160666666666667 0.191190199316182 0.20931328493992 1.49341924912288 1.4241763199119 Q9BRL6 SRSF8 Q9BRL6.S163.p_SRSF8 Q9BRL6_S163s _1_1_163_163 Q9BRL6 Q9BRL6|Q9BRL6-2 Serine/arginine-rich splicing factor 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.4944.4944.3 12.5 7.19 2.483 6 1 1 0 503.5741 1428.7433 S163s TMT10 158 (R) SPYSRsPYSR (S) S(0.0)PY(0.0)S(0.0)RS(0.99)PY(0.0)S(0.0)R s:Phosphorylated S SRSF8 32401.1 1 4 1728.1 119.22 HUMAN 1 7.1853 6.792 SRSQASPSEDEETFE-p Q13829;S280-p SRSQASPSEDEETFE 0.347648543667197 0.379174846232111 0.281333333333333 -0.16 8.52474868777916 5.59628133270417 0.281333333333333 -0.16 0.140451095574919 0.275658803480326 1.72609190733662 -1.21202433815172 Q13829 TNFAIP1 Q13829.S280.p_TNFAIP1 Q13829_S280s _1_1_280_280 Q13829 Q13829|Q13829-2 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12530.12530.3 12.31 12.31 1.899 4 1 1 0 769.0106 2225.052 S280s TMT10 275 (R) SQASPsEDEETFELRDR (V) S(0.0)QAS(0.0)PS(0.99)EDEET(0.0)FELRDR s:Phosphorylated S TNFAIP1 36717.1 1 3 5492.1 18.81 HUMAN 1 8.5247 -5.5963 SRSQSSHSYDDSTLP-p O60716-3;S864-p SRSQSSHSYDDSTLP 0.360620771574816 0.876279280223965 0.157333333333333 0.0203333333333333 8.23565240051989 0.806729084242427 0.157333333333333 0.0203333333333333 0.150118687936449 0.830476010176885 1.67601716148449 0.224648572855876 O60716 CTNND1 O60716.3.S864.p_CTNND1 O60716-3_S864s _1_1_864_864 O60716-3 O60716|O60716-2|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-9|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20|O60716-22|O60716-19|O60716-21|O60716-23|O60716-24|O60716-25|O60716-26|O60716-28|O60716-30|O60716-27|O60716-29|O60716-31|O60716-32 Isoform 1AC of Catenin delta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16042.16042.3 20.15 20.15 3.89 7 1 1 0 744.012 2150.0563 S864s TMT10 859 (R) SQSSHsYDDSTLPLIDR (N) S(0.0)QS(0.0)S(0.0)HS(0.99)Y(0.0)DDS(0.0)T(0.0)LPLIDR s:Phosphorylated S CTNND1 105545.3 6 33 21.1 1014.17 HUMAN 1 8.2357 0.8067 SRSQSTVSAGSSMTS-p Q5SYE7-2;S743-p SRSQSTVSAGSSMTS 0.202846697385928 0.134068049684981 -0.224 -0.193 13.4313497025846 11.5011993420158 -0.224 -0.193 0.0453800562364878 0.0707750305986094 -2.58909212759013 -2.24309566279804 Q5SYE7 NHSL1 Q5SYE7.2.S743.p_NHSL1 Q5SYE7-2_S743s _1_1_743_743 Q5SYE7-2 Q5SYE7-2 Isoform 2 of NHS-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21377.21377.4 15.03 11.54 1.191 18 1 1 0 1030.7329 4039.9476 S743s TMT10 738 (R) SQSTVsAGSSMTSATTPNVYSLCGATPSQSDTSSVK (S) S(0.0)QS(0.0)T(0.0)VS(0.99)AGS(0.0)S(0.0)MT(0.0)S(0.0)AT(0.0)T(0.0)PNVY(0.0)S(0.0)LCGAT(0.0)PS(0.0)QS(0.0)DT(0.0)S(0.0)S(0.0)VK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NHSL1 171957.1 1 7 747.1 232.6 HUMAN 1 -13.4313 -11.5012 SRSRHSHSGEERAEV-p Q14004-2;S238-p SRSRHSHSGEERAEV 0.80012376994327 0.840957671828892 -0.036 -0.024 1.86650447970594 1.05713542206053 -0.036 -0.024 0.650653173007621 0.783946558282374 -0.479031256305866 -0.28812087240612 Q14004 CDK13 Q14004.2.S238.p_CDK13 Q14004-2_S238s _1_1_238_238 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3795.3795.4 12.98 9.66 2.005 2 1 1 0 437.2103 1665.8506 S238s Hydrogen 235 (R) HSHsGEERAEVAK (S) HS(0.0)HS(0.99)GEERAEVAK K:TMT10-Lys-Only,s:Phosphorylated S CDK13 159173.6 2 2 145.1 520.12 HUMAN 1 -1.8665 -1.0571 SRSRQTPSPDVVLRG-p Q9UPQ0-4;S217-p SRSRQTPSPDVVLRG 0.373935912464191 0.800845798271565 0.13 0.0346666666666667 7.91005576292637 1.34882575353236 0.13 0.0346666666666667 0.16180592618095 0.733022701202081 1.61955372461217 0.359188267899412 Q9UPQ0 LIMCH1 Q9UPQ0.4.S217.p_LIMCH1 Q9UPQ0-4_S217s _1_1_217_217 Q9UPQ0-4 Q9UPQ0-6|Q9UPQ0-8|E7EPK0|Q9UPQ0-9|Q6NVB9|D6RJ93|Q9UPQ0-4|Q9UPQ0-2|Q9UPQ0-10|D6RD46|E9PDJ9|Q9UPQ0-5 Isoform 4 of LIM and calponin homology domains-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12743.12743.2 7.89 7.89 2.46 2 1 1 0 596.2917 1111.6106 S217s Hydrogen 214 (R) QTPsPDVVLR (G) QT(0.0)PS(0.99)PDVVLR s:Phosphorylated S LIMCH1 121463.5 3 5 679.1 246.52 HUMAN 1 7.9101 1.3488 SRSRSHISEEMD___-p J3KTL2;S249-p SRSRSHISEEMD___ 0.218741136565907 0.128640276276982 -0.217 0.350333333333333 12.7191096097855 11.7437923872189 -0.217 0.350333333333333 0.0534673966976513 0.0669299901791516 -2.46057302780716 2.28585923408888 J3KTL2 NotFound J3KTL2.S249.p_NotFound J3KTL2_S249s _1_1_249_249 J3KTL2 J3KTL2 Serine/arginine-rich-splicing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8239.8239.2 12.25 12.25 5.529 2 1 1 0 628.7577 1176.5404 S249s TMT10 246 (R) SHIsEEMD (-) S(0.0)HIS(0.99)EEMD s:Phosphorylated S SRSF1 28442.8 2 93 8.5 1346.57 HUMAN 1 -12.7191 11.7438 SRSRVSSSPGVKGGA-p P32519;S334-p SRSRVSSSPGVKGGA 0.754658716684806 0.208780301893562 -0.051 -0.172333333333333 2.33619785084615 8.95060353407193 -0.051 -0.172333333333333 0.583956120816854 0.127332611604734 -0.582032170580047 -1.79916864780517 P32519 ELF1 P32519.S334.p_ELF1 P32519_S334s _1_1_334_334 P32519 P32519|P32519-2 ETS-related transcription factor Elf-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8671.8671.2 10.52 5.19 1.31 3 1 1 0 649.8594 1218.7458 S334s TMT10 331 (R) VSSsPGVK (G) VS(0.0)S(0.0)S(0.99)PGVK K:TMT10,s:Phosphorylated S ELF1 67725 5 5 1950.1 105.53 HUMAN 1 -2.3362 -8.9506 SRSSHKDSPRDVSKK-p O15042;S974-p SRSSHKDSPRDVSKK 0.40186168282965 0.0316818764701209 -0.119333333333333 0.445333333333333 7.30803849733182 20.2464799729426 -0.119333333333333 0.445333333333333 0.185864372696886 0.00944826363081637 -1.5148332565183 3.92831457843157 O15042 U2SURP O15042.S974.p_U2SURP O15042_S974s _1_1_974_974 O15042 O15042|O15042-2|E7ET15|O15042-3 U2 snRNP-associated SURP motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.3814.3814.4 14.15 9.4 3.72 4 1 1 0 528.2865 2030.1598 S974s TMT10 969 (R) SSHKDsPRDVSK (K) S(0.0)S(0.0)HKDS(0.99)PRDVS(0.0)K K:TMT10,s:Phosphorylated S U2SURP 118746.2 5 17 360.1 345.29 HUMAN 1 -7.308 20.2465 SRSSSKGSVEEIMSQ-p Q8IWB9;S751-p SRSSSKGSVEEIMSQ 0.986258406648582 0.00320981770772267 -0.00333333333333333 -0.885 0.122158045279605 37.3976489840554 -0.00333333333333334 -0.885 0.972263977692724 0.000182068620474931 -0.0364059519309395 -9.0202571937625 Q8IWB9 TEX2 Q8IWB9.S751.p_TEX2 Q8IWB9_S751s _1_1_751_751 Q8IWB9 Q8IWB9-2|A0A087WVA8 Testis-expressed protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15629.15629.4 12.31 10.14 2.074 5 1 1 0 591.0645 2281.2677 S751s TMT10 746 (R) SSSKGsVEEIMSQPK (Q) S(0.0)S(0.0)S(0.0)KGS(0.99)VEEIMS(0.0)QPK K:TMT10,s:Phosphorylated S TEX2 125928 4 15 300.1 376.78 HUMAN 1 -0.1222 -37.3976 SRSSSLFSPWRSTCK-p Q9HC44;S445-p SRSSSLFSPWRSTCK 0.198599898076781 0.351305061269748 0.263666666666667 0.115 13.6671021692388 6.02156781520061 0.263666666666667 0.115 0.0429823130668783 0.249944289294919 2.63199860457429 1.28809736027198 Q9HC44 GPBP1L1 Q9HC44.S445.p_GPBP1L1 Q9HC44_S445s _1_1_445_445 Q9HC44 Q9HC44 Vasculin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24031.24031.2 9.38 9.38 4.225 4 1 1 0 688.3348 1295.6946 S445s TMT10 440 (R) SSSLFsPWR (S) S(0.0)S(0.0)S(0.0)LFS(0.99)PWR s:Phosphorylated S GPBP1L1 52642.9 1 8 2370.1 86.31 HUMAN 1 13.6671 6.0216 SRSSSLGSTPHEELE-p Q9NRA8;S356-p SRSSSLGSTPHEELE 0.17776892686696 0.166444982529729 -0.269666666666667 0.142 14.8639700681454 10.2412742689028 -0.269666666666667 0.142 0.0326289420942976 0.0945959565456773 -2.85297736820295 2.02282062426315 Q9NRA8 EIF4ENIF1 Q9NRA8.S356.p_EIF4ENIF1 Q9NRA8_S353sS356s_2_2_353_356 Q9NRA8 Q9NRA8-3|B1AKL4|Q9NRA8-2 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10053.10053.2 7.94 7.94 1.327 5 2 2 0 959.4146 1757.8867 S353s S356s TMT10 351 (R) SSsLGsTPHEELER (L) S(0.0)S(0.0)S(0.99)LGS(0.99)T(0.0)PHEELER s:Phosphorylated S EIF4ENIF1 108541.3 4 24 150.1 511.59 HUMAN 1 -14.864 10.2413 SRSSSLKSAQGTGFE-p Q9C0B5;S432-p SRSSSLKSAQGTGFE 0.479057002146671 0.0301337338809123 -0.142 0.299333333333333 5.8820003217088 20.5780877427422 -0.142 0.299333333333333 0.258107109845002 0.00875369127232451 -1.26351428047596 4.00024521282885 Q9C0B5 ZDHHC5 Q9C0B5.S432.p_ZDHHC5 Q9C0B5_S432s _1_1_432_432 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23106.23106.2 13.79 13.79 3.377 3 1 1 0 1000.9998 1921.0341 S432s TMT10 432 (K) sAQGTGFELGQLQSIR (S) S(0.99)AQGT(0.0)GFELGQLQS(0.0)IR s:Phosphorylated S ZDHHC5 78285 1 10 134.1 530.74 HUMAN 1 -5.882 20.5781 SRSSSMSSLTGAYAS-p Q96HA1;S396-p SRSSSMSSLTGAYAS 0.0593308507492355 0.0102881940436151 -0.482333333333333 -0.463 26.8065263061321 27.9113459702922 -0.482333333333334 -0.463 0.00208615882502929 0.00161757863817795 -5.51635146041831 -5.81259257645639 Q96HA1 POM121 Q96HA1.S396.p_POM121 Q96HA1_S396s _1_1_396_396 Q96HA1 Q96HA1|Q96HA1-3|Q96HA1-2 Nuclear envelope pore membrane protein POM 121 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18546.18546.2 17.45 17.45 1.155 11 1 1 0 1121.5162 2162.0597 S396s TMT10 391 (R) SSSMSsLTGAYASGIPSSSR (N) S(0.0)S(0.0)S(0.0)MS(0.0)S(0.99)LT(0.0)GAY(0.0)AS(0.0)GIPS(0.0)S(0.0)S(0.0)R s:Phosphorylated S POM121 128174.4 2 46 133.1 532.02 HUMAN 1 -26.8065 -27.9113 SRSSSVASLEKGTAP-p I3L2J0;S459-p SRSSSVASLEKGTAP 0.344187448967971 0.0212918287720786 -0.136 0.356666666666667 8.60233325604577 22.863330391673 -0.136 0.356666666666667 0.137964284949586 0.00517210056775658 -1.73952467310972 4.51717260819686 I3L2J0 NotFound I3L2J0.S459.p_NotFound I3L2J0_S459s _1_1_459_459 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12301.12301.2 11.46 3.25 3.69 4 1 1 0 723.3867 1365.799 S459s TMT10 454 (R) SSSVAsLEK (G) S(0.0)S(0.0)S(0.0)VAS(0.99)LEK K:TMT10,s:Phosphorylated S CIC 259056.7 2 5 23.1 999.57 HUMAN 1 -8.6023 22.8633 SRSSSVGSSSSYPIS-p Q15149;S4389-p SRSSSVGSSSSYPIS 0.968736469230095 0.254325724656352 -0.00633333333333335 -0.136333333333333 0.27060623881069 7.83335814144848 -0.00633333333333334 -0.136333333333333 0.939592142197249 0.164688845796864 -0.0793684267644459 -1.60574096287705 Q15149 PLEC Q15149.S4389.p_PLEC Q15149_S4389s _1_1_4389_4389 Q15149 Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13718.13922.2 16.65 16.65 1.117 10 1 1 0 1032.4956 1984.0185 S4389s TMT10 4384 (R) SSSVGsSSSYPISPAVSR (T) S(0.0)S(0.0)S(0.0)VGS(0.99)S(0.0)S(0.0)S(0.0)Y(0.0)PIS(0.0)PAVS(0.0)R s:Phosphorylated S PLEC 533778 2 34 44.1 794.85 HUMAN 1 -0.2706 -7.8334 SRSSSVLSLEGSEKG-p A1L390;S643-p SRSSSVLSLEGSEKG 0.316140239892734 0.0799250699897991 -0.211 -0.382333333333333 9.36131455693774 14.5636731994759 -0.211 -0.382333333333333 0.115842666132466 0.0349649313634678 -1.87092833469617 -2.79525193335938 A1L390 PLEKHG3 A1L390.S643.p_PLEKHG3 A1L390_S643s _1_1_643_643 A1L390 A1L390|A1L390-3|A1L390-2|G3V311 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17513.17513.2 14.69 14.69 3.622 5 1 1 0 880.957 1680.942 S643s TMT10 638 (R) SSSVLsLEGSEK (G) S(0.0)S(0.0)S(0.0)VLS(0.99)LEGS(0.0)EK K:TMT10,s:Phosphorylated S PLEKHG3 135322.7 2 9 284.1 386.18 HUMAN 1 -9.3613 -14.5637 SRSSSYRSYKSHRTS-p P30414;S1376-p SRSSSYRSYKSHRTS 0.281543097513104 0.00309969692782124 -0.366 0.759333333333333 10.4071559247384 37.6851364693764 -0.366 0.759333333333333 0.0910509344993651 0.000170406577121472 -2.05254474934706 9.1373617348937 P30414 NKTR P30414.S1376.p_NKTR P30414_S1376s _1_1_1376_1376 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6685.6685.3 8.4 8.4 8.403 6 1 1 0 505.9251 1435.7946 S1376s TMT10 1371 (R) SSSYRsYK (S) S(0.0)S(0.0)S(0.0)Y(0.0)RS(0.99)Y(0.0)K K:TMT10,s:Phosphorylated S NKTR 166700.6 1 27 202.1 449.45 HUMAN 1 -10.4072 37.6851 SRSSTVASLDTDSTK-p O14713;S41-p SRSSTVASLDTDSTK 0.721843173945445 0.222842594978246 0.0503333333333333 -0.127 2.67760639875323 8.58764957467966 0.0503333333333333 -0.127 0.539808054162594 0.138431537527166 0.65413373323725 -1.73638892899744 O14713 ITGB1BP1 O14713.S41.p_ITGB1BP1 O14713_S41s _1_1_41_41 O14713 O14713|A8MPU2|O14713-2|G3V1A3 Integrin beta-1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12660.12660.2 17.45 17.45 3.227 7 1 1 0 925.4629 1769.9533 S41s TMT10 36 (R) SSTVAsLDTDSTK (S) S(0.0)S(0.0)T(0.0)VAS(0.99)LDT(0.0)DS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S ITGB1BP1 22010.3 1 1 5654.1 17.45 HUMAN 1 2.6776 -8.5876 SRSTCGDSEVEEESP-p O95696-2;S939-p SRSTCGDSEVEEESP 0.0515638782216539 0.265234443176566 -0.485 0.131333333333333 28.1831131704866 7.59082244295933 -0.485 0.131333333333333 0.0015194579401456 0.174147705083461 -5.89782117816805 1.5636183918706 O95696 BRD1 O95696.2.S939.p_BRD1 O95696-2_S939s _1_1_939_939 O95696-2 O95696-2 Isoform 2 of Bromodomain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9565.9565.3 13.96 13.54 2.24 4 1 1 0 716.9855 2068.9745 S939s TMT10 934 (R) STCGDsEVEEESPGK (R) S(0.0)T(0.0)CGDS(0.99)EVEEES(0.0)PGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRD1 135466.1 5 8 1002.1 189.89 HUMAN 1 -28.1831 7.5908 SRSTTAHSWQRSRSY-p Q9UKJ3;S981-p SRSTTAHSWQRSRSY 0.337603610474496 0.0776843501291223 0.162666666666667 0.243 8.78198692452301 14.7195132804473 0.162666666666667 0.243 0.132373577920624 0.0337325111010555 1.77062454639779 2.8242085288079 Q9UKJ3 GPATCH8 Q9UKJ3.S981.p_GPATCH8 Q9UKJ3_S981s _1_1_981_981 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4342.4342.3 13.94 13.94 4.215 4 1 1 0 461.5515 1302.6752 S981s TMT10 976 (R) STTAHsWQR (S) S(0.0)T(0.0)T(0.0)AHS(0.99)WQR s:Phosphorylated S GPATCH8 165107.3 3 9 231.1 422.52 HUMAN 1 8.782 14.7195 SRSVSPCSNVESRLL-p Q9UQ35;S957-p SRSVSPCSNVESRLL 0.432830163286795 0.0478710154212841 0.137 0.867666666666667 6.69838778541066 17.6550861053493 0.137 0.867666666666667 0.213875590422382 0.0171589768955645 1.40810727553673 3.39008608458012 Q9UQ35 SRRM2 Q9UQ35.S957.p_SRRM2 Q9UQ35_S957s _1_1_957_957 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7025.7025.2 8.91 8.91 8.913 4 1 1 0 765.8448 1450.7158 S957s TMT10 952 (R) SVSPCsNVESR (L) S(0.0)VS(0.0)PCS(0.99)NVES(0.0)R C:Carbamidomethylation,s:Phosphorylated S SRRM2 300351.7 1 42 2.1 3310.34 HUMAN 1 6.6984 17.6551 SRTARIASDEEIQGT-p Q8WX93;S893-p SRTARIASDEEIQGT 0.836372411785846 0.00231718681032454 0.105666666666667 -1.43633333333333 1.49948743451804 40.5864645195552 0.105666666666667 -1.43633333333333 0.708029342891436 8.73682321425789e-05 0.39486761875943 -10.3983199314685 Q8WX93 PALLD Q8WX93.S893.p_PALLD Q8WX93_S893s _1_1_893_893 Q8WX93 Q8WX93|Q8WX93-5|Q8WX93-9|Q8WX93-2|Q8WX93-3|Q8WX93-8 Palladin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27903.27903.4 17.92 10.27 7.777 2 1 1 0 782.1769 3045.7035 S893s TMT10 891 (R) IAsDEEIQGTKDAVIQDLERK (L) IAS(0.99)DEEIQGT(0.0)KDAVIQDLERK K:TMT10,s:Phosphorylated S PALLD 151930.4 4 7 338.1 354.43 HUMAN 1 1.4995 -40.5865 SRTASLVSGLLNELY-p Q9Y2I9;S83-p SRTASLVSGLLNELY 0.392777823777633 0.169104161547639 0.127333333333333 0.180333333333333 7.48420317399715 10.1522729060016 0.127333333333333 0.180333333333333 0.178475941896294 0.0965545422794791 1.54553211726844 2.00735259929662 Q9Y2I9 TBC1D30 Q9Y2I9.S83.p_TBC1D30 Q9Y2I9_S83s _1_1_83_83 Q9Y2I9 Q9Y2I9 TBC1 domain family member 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.37053.37053.3 20.58 20.58 2.596 6 1 1 0 1008.1355 2942.4251 S83s TMT10 78 (R) TASLVsGLLNELYSCTEEEEAAGGGR (G) T(0.0)AS(0.0)LVS(0.99)GLLNELY(0.0)S(0.0)CT(0.0)EEEEAAGGGR C:Carbamidomethylation,s:Phosphorylated S TBC1D30 103654.4 1 4 283.1 386.67 HUMAN 1 7.4842 10.1523 SRTLDKVSLEETAQL-p Q9BRP8;S117-p SRTLDKVSLEETAQL 0.892526264868545 0.715310489505581 0.031 0.0426666666666667 0.966637889178585 2.00201170856843 0.031 0.0426666666666667 0.800453690133794 0.630665144506259 0.265488829164712 0.509188360689959 Q9BRP8 WIBG Q9BRP8.S117.p_WIBG Q9BRP8_S117s _1_1_117_117 Q9BRP8 Q9BRP8|Q9BRP8-2 Partner of Y14 and mago HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19639.19639.4 16.98 16.98 2.296 5 1 1 0 692.1184 2685.4823 S117s TMT10 112 (R) TLDKVsLEETAQLPSAPQGSR (A) T(0.0)LDKVS(0.99)LEET(0.0)AQLPS(0.0)APQGS(0.0)R K:TMT10,s:Phosphorylated S PYM1 22655.1 4 3 2950.1 64.93 HUMAN 1 0.9666 2.002 SRTLNAETPKSSPLP-p Q7L2J0;T213-p SRTLNAETPKSSPLP 0.577239623752612 0.047269329716875 -0.121 0.370333333333333 4.39063174252672 17.7342888610036 -0.121 0.370333333333333 0.363862103406742 0.0168488829757807 -0.991100763923437 3.40595210955631 Q7L2J0 MEPCE Q7L2J0.T213.p_MEPCE Q7L2J0_T213t _1_1_213_213 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9553.9553.2 9.67 6.46 5.957 2 1 1 0 706.3848 1331.7935 T213t TMT10 208 (R) TLNAEtPK (S) T(0.0)LNAET(0.99)PK K:TMT10,t:Phosphorylated T MEPCE 74981.5 3 7 428.1 317.7 HUMAN 1 -4.3906 17.7343 SRTLTRTSQETADVK-p H3BVG0;S52-p SRTLTRTSQETADVK 0.301639765350884 0.29299401173114 0.166666666666667 0.164333333333333 9.76274817849145 7.03879657083986 0.166666666666667 0.164333333333333 0.105614897563851 0.197751753391969 1.94051962373898 1.46739499032045 H3BVG0 NotFound H3BVG0.S52.p_NotFound H3BVG0_S52s _1_1_52_52 H3BVG0 H3BVG0|Q8N1F7 Nuclear pore complex protein Nup93 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8326.8326.2 10.58 10.58 1.453 3 1 1 0 758.8865 1436.7997 S52s TMT10 51 (R) TsQETADVK (A) T(0.0)S(0.99)QET(0.0)ADVK K:TMT10,s:Phosphorylated S NUP93 100351.7 4 2 862.1 210.52 HUMAN 1 9.7627 7.0388 SRTPRDVSGLRDVKM-p Q9BZE4;S578-p SRTPRDVSGLRDVKM 0.303027901035428 0.0326420766668233 -0.150333333333333 -0.461333333333333 9.71731642995791 20.056027567407 -0.150333333333333 -0.461333333333333 0.106725539046432 0.00987182034782159 -1.93263780489809 -3.88733426250798 Q9BZE4 GTPBP4 Q9BZE4.S578.p_GTPBP4 Q9BZE4_S578s _1_1_578_578 Q9BZE4 Q9BZE4|Q9BZE4-2|Q9BZE4-3 Nucleolar GTP-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12797.12797.3 8.52 6.46 99 1 1 1 0 509.616 1446.868 S578s TMT10 576 (R) DVsGLRDVK (M) DVS(1.0)GLRDVK K:TMT10,s:Phosphorylated S GTPBP4 74362.6 4 3 3169.1 58.8 HUMAN 1 -9.7173 -20.056 SRTPSLPTPPTREPK-p P10636;T534-p SRTPSLPTPPTREPK 0.0884809517257935 0.12675992441163 0.331333333333333 0.162 22.4429905362391 11.8247973777386 0.331333333333333 0.162 0.00569771794351043 0.0656931765241177 4.42397177183898 2.30016854517566 P10636 MAPT P10636.T534.p_MAPT P10636_T534t _1_1_534_534 P10636 P10636-9|A0A0G2JMX7|A0A0G2JS76|A0A0G2JPD5|A0A0G2JQJ7|P10636-8|P10636-7|P10636-5|P10636-6|P10636-4|P10636-2 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13135.13135.4 12.39 8.74 1.476 4 1 1 0 579.8384 2236.3632 T534t TMT10 529 (R) TPSLPtPPTREPKK (V) T(0.0)PS(0.0)LPT(0.99)PPT(0.0)REPKK K:TMT10,t:Phosphorylated T MAPT 79154.4 7 16 119.1 551.6 HUMAN 1 22.443 11.8248 SRTPSPKSLPSYLNG-p Q9UJM3;S337-p SRTPSPKSLPSYLNG 0.0506176118125653 0.0211656247596102 -0.474333333333333 -0.314333333333333 28.5155983736031 22.9004520474786 -0.474333333333333 -0.314333333333333 0.00140747329246806 0.0051280800416734 -5.99289992599672 -4.52589311353367 Q9UJM3 ERRFI1 Q9UJM3.S337.p_ERRFI1 Q9UJM3_S337s _1_1_337_337 Q9UJM3 Q9UJM3 ERBB receptor feedback inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31084.31084.3 19.38 14.4 2.122 5 1 1 0 928.8089 2704.442 S337s TMT10 337 (K) sLPSYLNGVMPPTQSFAPDPK (Y) S(0.99)LPS(0.0)Y(0.0)LNGVMPPT(0.0)QS(0.0)FAPDPK K:TMT10,s:Phosphorylated S ERRFI1 51186.7 2 4 1507.1 135.54 HUMAN 1 -28.5156 -22.9005 SRTPSPRSPAPARVK-p Q8IX07;S494-p SRTPSPRSPAPARVK 0.55638562988784 0.00968533308933576 0.087 -0.513 4.7011031818022 28.3633263166381 0.087 -0.513 0.338758094895093 0.00145769736366833 1.04898756956993 -5.94046340143174 Q8IX07 ZFPM1 Q8IX07.S494.p_ZFPM1 Q8IX07_S494s _1_1_494_494 Q8IX07 Q8IX07 Zinc finger protein ZFPM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4027.4027.3 10.64 4.45 1.262 3 1 1 0 482.5878 1365.78 S494s TMT10 489 (R) TPSPRsPAPAR (V) T(0.0)PS(0.0)PRS(0.99)PAPAR s:Phosphorylated S ZFPM1 106540.7 1 2 961.1 194.31 HUMAN 1 4.7011 -28.3633 SRTQSVRSPTPYKKQ-p Q9Y2I7;S88-p SRTQSVRSPTPYKKQ 0.758803098663587 0.727476479191609 0.056 -0.037 2.2967936354782 1.90211029594271 0.056 -0.037 0.589278554858461 0.645340573076214 0.573570172580176 -0.486957316896513 Q9Y2I7 PIKFYVE Q9Y2I7.S88.p_PIKFYVE Q9Y2I7_S88s _1_1_88_88 Q9Y2I7 Q9Y2I7|Q9Y2I7-4|Q9Y2I7-3|Q9Y2I7-2 1-phosphatidylinositol 3-phosphate 5-kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.7813.7813.3 11.02 6.86 2.391 5 1 1 0 601.325 1721.995 S88s TMT10 83 (R) TQSVRsPTPYK (K) T(0.0)QS(0.0)VRS(0.99)PT(0.0)PY(0.0)K K:TMT10,s:Phosphorylated S PIKFYVE 239756.4 3 1 1398.1 146.55 HUMAN 1 2.2968 -1.9021 SRTRTPASINATPAN-p Q7KZ85;S1535-p SRTRTPASINATPAN 0.223663787104468 0.0211465120237075 0.198333333333333 0.356333333333333 12.4969468039965 22.9079788998091 0.198333333333333 0.356333333333333 0.0562736803840077 0.00511920015156296 2.4208021256773 4.52766262003428 Q7KZ85 SUPT6H Q7KZ85.S1535.p_SUPT6H Q7KZ85_S1535s _1_1_1535_1535 Q7KZ85 Q7KZ85|Q7KZ85-2 Transcription elongation factor SPT6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26310.26310.2 11.66 11.66 4.095 4 1 1 0 1131.5881 2182.2029 S1535s TMT10 1532 (R) TPAsINATPANINLADLTR (A) T(0.0)PAS(0.99)INAT(0.0)PANINLADLT(0.0)R s:Phosphorylated S SUPT6H 200324.3 3 11 279.1 388.92 HUMAN 1 12.4969 22.908 SRTSEEISLNDAGVE-p Q14789-2;S658-p SRTSEEISLNDAGVE 0.253551933885431 0.0372178679540113 0.174333333333333 -0.277 11.353334714082 19.2124324602319 0.174333333333333 -0.277 0.0732262052514345 0.0119882765809666 2.21813039600287 -3.70863407457928 Q14789 GOLGB1 Q14789.2.S658.p_GOLGB1 Q14789-2_S658s _1_1_658_658 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22686.22686.3 15.62 12.74 3.89 3 1 1 0 715.038 2063.1272 S658s TMT10 653 (R) TSEEIsLNDAGVELK (S) T(0.0)S(0.0)EEIS(0.99)LNDAGVELK K:TMT10,s:Phosphorylated S GOLGB1 378557.2 2 10 93.1 610.98 HUMAN 1 11.3533 -19.2124 SRTSITPSSQDICRI-p Q5T0T0;S75-p SRTSITPSSQDICRI 0.228869672305471 0.388813256379092 0.426333333333333 0.123333333333333 12.3056470559771 5.45358604465784 0.426333333333333 0.123333333333333 0.0588078489716329 0.284866510406339 2.38666813298122 1.18631039648667 Q5T0T0 MARCH8 Q5T0T0.S75.p_MARCH8 Q5T0T0_S75s _1_1_75_75 Q5T0T0 Q5T0T0 E3 ubiquitin-protein ligase MARCH8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10820.10820.2 11.6 11.6 1.151 5 1 1 0 837.3903 1593.8104 S75s TMT10 70 (R) TSITPsSQDICR (I) T(0.0)S(0.0)IT(0.0)PS(0.99)S(0.0)QDICR C:Carbamidomethylation,s:Phosphorylated S MARCH8 33877.2 1 2 4048.2 38.63 HUMAN 1 12.3056 5.4536 SRTSSLGSGGPDCAI-p Q9NYQ6;S2971-p SRTSSLGSGGPDCAI 0.252651211577592 0.915771863708642 -0.192333333333333 0.0106666666666667 11.3946917187013 0.537038393204316 -0.192333333333333 0.0106666666666667 0.0725321962802662 0.883682309035427 -2.22540622509725 0.153331007732933 Q9NYQ6 CELSR1 Q9NYQ6.S2971.p_CELSR1 Q9NYQ6_S2971s _1_1_2971_2971 Q9NYQ6 Q9NYQ6 Cadherin EGF LAG seven-pass G-type receptor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17348.17348.3 12.36 12.36 2.346 5 1 1 0 696.6846 2008.0785 S2971s TMT10 2966 (R) TSSLGsGGPDCAITVK (S) T(0.0)S(0.0)S(0.0)LGS(0.99)GGPDCAIT(0.0)VK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CELSR1 334558.1 2 7 1317.1 154.7 HUMAN 1 -11.3947 0.537 SRTTDGVYEGVAIGG-p P53396;Y682-p SRTTDGVYEGVAIGG 0.89126578056507 0.43548219420351 0.025 -0.09 0.975974748162614 4.81026275032436 0.025 -0.09 0.798734650300846 0.330349554119672 0.267841040934595 -1.06896110507535 P53396 ACLY P53396.Y682.p_ACLY P53396_Y682y _1_1_682_682 P53396 P53396 ATP-citrate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24112.24112.4 8.56 8.56 8.562 6 1 1 0 806.3896 3142.5465 Y682y TMT10 677 (R) TTDGVyEGVAIGGDRYPGSTFMDHVLR (Y) T(0.0)T(0.0)DGVY(0.99)EGVAIGGDRY(0.0)PGS(0.0)T(0.0)FMDHVLR y:Phosphorylated Y ACLY 121749.9 1 5 1256.1 161.58 HUMAN 1 0.976 -4.8103 SRTVLCGTCGQPADK-p P02545;T590-p SRTVLCGTCGQPADK 0.5493736861152 0.745610043086696 0.0806666666666667 0.0383333333333333 4.8028311248477 1.75926909558244 0.0806666666666667 0.0383333333333334 0.330915330565086 0.666919000210677 1.06779884840035 0.454754359454725 P02545 LMNA P02545.T590.p_LMNA P02545_T590t _1_1_590_590 P02545 P02545|P02545-3|P02545-6|P02545-4 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12612.12612.3 11.01 8.89 4.107 2 1 1 0 648.9826 1864.9661 T590t TMT10 585 (R) TVLCGtCGQPADK (A) T(0.0)VLCGT(0.99)CGQPADK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T LMNA 74423.5 2 32 60.1 706.83 HUMAN 1 4.8028 1.7593 SRTVSASSTGDLPKA-p P78362;S497-p SRTVSASSTGDLPKA 0.0404299711718947 0.00752314179680432 -0.543666666666667 -0.52 31.1697618012801 30.3479402772505 -0.543666666666667 -0.52 0.000763877679043355 0.000923009077670589 -6.79607350859085 -6.52818172733763 P78362 SRPK2 P78362.S497.p_SRPK2 P78362_S497s _1_1_497_497 P78362 P78362-2 SRSF protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13065.13598.2 14.3 14.3 1.107 5 1 1 0 850.947 1620.9209 S497s TMT10 492 (R) TVSASsTGDLPK (A) T(0.0)VS(0.0)AS(0.0)S(0.99)T(0.0)GDLPK K:TMT10,s:Phosphorylated S SRPK2 78267 4 7 2258.1 91.02 HUMAN 1 -31.1698 -30.3479 SRTVVAPSAVAGKRP-p Q9NX14-2;S41-p SRTVVAPSAVAGKRP 0.42081761725115 0.0925322129540486 0.120666666666667 -0.284333333333333 6.93325108760927 13.6714133273479 0.120666666666667 -0.284333333333333 0.202616538332767 0.0429396665189651 1.44932403676352 -2.63125129761032 Q9NX14 NDUFB11 Q9NX14.2.S41.p_NDUFB11 Q9NX14-2_S41s _1_1_41_41 Q9NX14-2 Q9NX14-2 Isoform 2 of NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15986.15986.2 7.31 7.31 7.314 2 1 1 0 769.4425 1457.9092 S41s TMT10 36 (R) TVVAPsAVAGK (R) T(0.0)VVAPS(0.99)AVAGK K:TMT10,s:Phosphorylated S NDUFB11 18534.7 1 1 7205.1 7.31 HUMAN 1 6.9333 -13.6714 SRTWDDDSDPESETD-p Q5XUX1;S18-p SRTWDDDSDPESETD 0.481116712450675 0.0935778270577626 0.0946666666666666 0.257 5.84763188325813 13.6065503957864 0.0946666666666666 0.257 0.260157776227385 0.0435857938503675 1.25737251897338 2.61944191954459 Q5XUX1 FBXW9 Q5XUX1.S18.p_FBXW9 Q5XUX1_S18s _1_1_18_18 Q5XUX1 Q5XUX1|Q5XUX1-2|Q5XUX1-3|K7EL01 F-box/WD repeat-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11451.11451.3 21.19 17.73 1.724 5 1 1 0 1098.4554 3213.3802 S18s TMT10 8 (R) CDDSRTWDDDsDPESETDPDAQAK (A) CDDS(0.0)RT(0.0)WDDDS(0.99)DPES(0.0)ET(0.0)DPDAQAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FBXW9 54798.8 6 1 2578.1 77.92 HUMAN 1 5.8476 13.6066 SRVEQALSEVASSLQ-p Q86TV6-2;S690-p SRVEQALSEVASSLQ 0.628959461918082 0.0630817908838208 -0.077 0.236666666666667 3.74183013625575 15.977762864686 -0.077 0.236666666666667 0.422490537356175 0.0252478100134707 -0.867446906944023 3.06176198181653 Q86TV6 TTC7B Q86TV6.2.S690.p_TTC7B Q86TV6-2_S690s _1_1_690_690 Q86TV6-2 Q86TV6-2 Isoform 2 of Tetratricopeptide repeat protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.31622.31622.3 15.86 15.86 1.6 5 1 1 0 790.418 2289.2702 S690s TMT10 685 (R) VEQALsEVASSLQSSAPK (Q) VEQALS(0.99)EVAS(0.0)S(0.0)LQS(0.0)S(0.0)APK K:TMT10,s:Phosphorylated S TTC7B 96901.3 1 5 2074.1 99.01 HUMAN 1 -3.7418 15.9778 SRVSMTGYKGTFTLH-p O75339;Y522-p SRVSMTGYKGTFTLH 0.797936544017029 0.0825038254171538 -0.0366666666666667 0.238 1.89254902319546 14.3516204484168 -0.0366666666666667 0.238 0.646762897008477 0.0367145284941373 -0.484872535354802 2.7560044630424 O75339 CILP O75339.Y522.p_CILP O75339_Y522y_1_1_522_522 O75339 O75339 Cartilage intermediate layer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32621.32621.4 8.96 5.15 4.825 6 1 1 0 908.9171 3519.7336 N501n M505m M512m Y522y TMT10 496 (R) VSAADnGEPmRFGHVYmGNSRVSMTGyK (G) VS(0.0)AADN(0.99)GEPM(0.99)RFGHVY(0.0)M(0.99)GN(0.0)S(0.0)RVS(0.0)M(0.0)T(0.0)GY(0.99)K K:TMT10,n:Deamidated,m:Oxidized methionine,y:Phosphorylated Y CILP 134844.5 2 1 6059.1 14.35 HUMAN 1 -1.8925 14.3516 SRVTRSGSLKGPDDP-p Q96G01;S548-p SRVTRSGSLKGPDDP 0.331509205095072 0.0332421602815212 -0.162333333333333 -0.296 8.95675283548671 19.9323207807252 -0.162333333333333 -0.296 0.127152445251726 0.0101570577546685 -1.80087643433213 -3.86084355827388 Q96G01 BICD1 Q96G01.S548.p_BICD1 Q96G01_S548s _1_1_548_548 Q96G01 Q96G01|Q96G01-3|Q96G01-4|A8MVZ6 Protein bicaudal D homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6671.6671.3 8.77 4.09 2.031 2 1 1 0 556.2905 1586.8902 S548s TMT10 546 (R) SGsLKGPDDPR (G) S(0.0)GS(0.99)LKGPDDPR K:TMT10,s:Phosphorylated S BICD1 111318.5 2 2 3561.1 48.23 HUMAN 1 -8.9568 -19.9323 SRWFSNPSRSGSRSS-p Q9NRA8;S345-p SRWFSNPSRSGSRSS 0.758432602581159 0.264945789211305 0.0733333333333333 0.155666666666667 2.30031110134981 7.59719444023242 0.0733333333333333 0.155666666666667 0.588801475797132 0.173892381774168 0.574326790386047 1.56472606651784 Q9NRA8 EIF4ENIF1 Q9NRA8.S345.p_EIF4ENIF1 Q9NRA8_S345s _1_1_345_345 Q9NRA8 Q9NRA8-3|B1AKL4|Q9NRA8-2 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16367.16367.2 9.91 9.91 4.019 2 1 1 0 601.7815 1122.5894 S345s TMT10 340 (R) WFSNPsR (S) WFS(0.0)NPS(0.99)R s:Phosphorylated S EIF4ENIF1 108541.3 1 9 150.1 511.59 HUMAN 1 2.3003 7.5972 SRYARKISGTTALQE-p P30622;S348-p SRYARKISGTTALQE 0.677421637236938 0.00977013112430698 -0.0686666666666667 0.541333333333333 3.16722076177843 28.2957370943365 -0.0686666666666667 0.541333333333333 0.482256315571476 0.00148056094981656 -0.754176808231213 5.92120535415925 P30622 CLIP1 P30622.S348.p_CLIP1 P30622_S348s _1_1_348_348 P30622 P30622|P30622-1|P30622-2|J3KP58|Q9UDT6|F5H0N7|Q9UDT6-2 CAP-Gly domain-containing linker protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21189.21189.2 15.2 7.65 1.134 3 1 1 0 1064.124 2047.273 S348s TMT10 346 (R) KIsGTTALQEALK (E) KIS(0.99)GT(0.0)T(0.0)ALQEALK K:TMT10,s:Phosphorylated S CLIP1 162985.2 5 10 372.1 339.16 HUMAN 1 -3.1672 28.2957 SRYMSQMSVPEQAEL-p E7ETA6;S93-p SRYMSQMSVPEQAEL 0.166246459389339 0.576771579072983 0.296333333333333 0.0816666666666667 15.5877554880518 3.22277745800705 0.296333333333333 0.0816666666666667 0.0276200494121845 0.47612639071504 2.98942928204332 0.765196760133756 E7ETA6 PCM1 E7ETA6.S93.p_PCM1 E7ETA6_S93s _1_1_93_93 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21505.21505.3 17.65 17.65 3.851 3 1 1 0 770.0383 2228.1343 S93s TMT10 88 (R) YMSQMsVPEQAELEK (L) Y(0.0)MS(0.0)QMS(0.99)VPEQAELEK K:TMT10,s:Phosphorylated S PCM1 229381.8 5 4 13.1 1159.95 HUMAN 1 15.5878 3.2228 SRYSLGPSLRRGHEV-p Q14573;S1847-p SRYSLGPSLRRGHEV 0.406964394863387 0.878083176837687 -0.112 -0.0226666666666666 7.21047150995408 0.792842422349231 -0.112 -0.0226666666666666 0.190087189261881 0.833135725528421 -1.49780717713786 -0.221055009249823 Q14573 ITPR3 Q14573.S1847.p_ITPR3 Q14573_S1847s _1_1_1847_1847 Q14573 Q14573 Inositol 1,4,5-trisphosphate receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11088.11088.3 13.91 11.98 8.061 3 1 1 0 453.2432 1277.7527 S1847s TMT10 1842 (R) YSLGPsLRR (G) Y(0.0)S(0.0)LGPS(0.99)LRR s:Phosphorylated S ITPR3 307010.8 1 8 1377.1 148.68 HUMAN 1 -7.2105 -0.7928 SRYSMYNSVSQKLMA-p Q8N1G2;S89-p SRYSMYNSVSQKLMA 0.782183856499527 0.668018436797241 0.0386666666666667 -0.0596666666666666 2.04836299833902 2.39830065080745 0.0386666666666667 -0.0596666666666666 0.623969986391163 0.575665145064733 0.519485932288193 -0.595232817478244 Q8N1G2 CMTR1 Q8N1G2.S89.p_CMTR1 Q8N1G2_S89s _1_1_89_89 Q8N1G2 Q8N1G2 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13614.13614.3 8.18 8.18 2 5 1 1 0 582.2834 1664.8718 S89s TMT10 84 (R) YSMYNsVSQK (L) Y(0.0)S(0.0)MY(0.0)NS(0.99)VS(0.0)QK K:TMT10,s:Phosphorylated S CMTR1 96231.9 1 3 2841.1 68.37 HUMAN 1 2.0484 -2.3983 SSADKSGTM______-p O43295;T1098-p SSADKSGTM______ 0.41796188299629 0.175235685147296 0.149333333333333 -0.208333333333333 6.99144262630811 9.94629822811966 0.149333333333333 -0.208333333333333 0.199919767187182 0.101244205622369 1.45951520624249 -1.97158963491954 O43295 SRGAP3 O43295.T1098.p_SRGAP3 O43295_T1098t_1_1_1098_1098 O43295 O43295|O43295-2 SLIT-ROBO Rho GTPase-activating protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14850.14850.3 17.54 17.54 2.518 4 1 1 0 642.9637 1830.913 T1098t M1099m TMT10 1087 (K) MFPNSSADKSGtm (-) M(0.0)FPNS(0.0)S(0.0)ADKS(0.0)GT(0.99)M(0.99) K:TMT10,t:Phosphorylated T,m:Oxidized methionine SRGAP3 125471.5 2 14 754.1 231.27 HUMAN 1 6.9914 -9.9463 SSADTEFSDECTTAE-p Q9H6S0;S1208-p SSADTEFSDECTTAE 0.373125692310249 0.175068160327959 -0.179666666666667 0.149 7.9414852011106 9.95139063232989 -0.179666666666667 0.149 0.160639180488739 0.101125559338802 -1.62500818140963 1.97247327863749 Q9H6S0 YTHDC2 Q9H6S0.S1208.p_YTHDC2 Q9H6S0_S1208s _1_1_1208_1208 Q9H6S0 Q9H6S0 Probable ATP-dependent RNA helicase YTHDC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8638.8638.2 19.26 19.26 3.585 6 1 1 0 1057.926 2034.876 S1208s TMT10 1201 (K) SSADTEFsDECTTAER (V) S(0.0)S(0.0)ADT(0.0)EFS(0.99)DECT(0.0)T(0.0)AER C:Carbamidomethylation,s:Phosphorylated S YTHDC2 161671.9 4 8 668.1 249.65 HUMAN 1 -7.9415 9.9514 SSAFSPASPATPNGT-p Q53GS7;S99-p SSAFSPASPATPNGT 0.71764673160313 0.479524924778385 0.0556666666666667 0.0893333333333334 2.71904878701874 4.25905289015566 0.0556666666666667 0.0893333333333334 0.534681455116263 0.375054785312954 0.66274648338156 0.966163570478106 Q53GS7 GLE1 Q53GS7.S99.p_GLE1 Q53GS7_S99s _1_1_99_99 Q53GS7 Q53GS7|Q53GS7-2 Nucleoporin GLE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14106.14106.3 20.63 20.63 1.803 7 1 1 0 810.0652 2348.2134 S99s TMT10 88 (K) SPDASSAFSPAsPATPNGTK (G) S(0.0)PDAS(0.0)S(0.0)AFS(0.0)PAS(0.99)PAT(0.0)PNGT(0.0)K K:TMT10,s:Phosphorylated S GLE1 80405.3 5 3 3903.1 41.03 HUMAN 1 2.719 4.2591 SSAFVGKTPEASPEP-p A0A087WW66;T311-p SSAFVGKTPEASPEP 0.232413765653254 0.735435468052079 -0.245666666666667 -0.0333333333333333 12.1816905066357 1.84000646061723 -0.245666666666667 -0.0333333333333333 0.0605105289530944 0.65463520022331 -2.36460345607933 -0.473018043906432 A0A087WW66 NotFound A0A087WW66.T311.p_NotFound A0A087WW66_T311t _1_1_311_311 A0A087WW66 Q99460|A0A087WW66|Q99460-2 26S proteasome non-ATPase regulatory subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15620.15620.5 19.46 19.46 1.761 6 1 1 0 663.7671 3234.8392 T311t TMT10 303 (K) TSSAFVGKtPEASPEPKDQTLK (M) T(0.0)S(0.0)S(0.0)AFVGKT(0.99)PEAS(0.0)PEPKDQT(0.0)LK K:TMT10,t:Phosphorylated T PSMD1 106876.4 4 4 1299.1 156.53 HUMAN 1 -12.1817 -1.84 SSAGRAPSIVQDGPQ-p O94887;S1033-p SSAGRAPSIVQDGPQ 0.585616421770961 0.356182103013457 0.098 0.102333333333333 4.27384228407303 5.94647566051493 0.098 0.102333333333333 0.373779752045106 0.254303556506674 0.969126084203446 1.27472207207591 O94887 FARP2 O94887.S1033.p_FARP2 O94887_S1033s _1_1_1033_1033 O94887 O94887 FERM, ARHGEF and pleckstrin domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28504.28504.4 7.72 7.72 1.656 6 1 1 0 949.2161 3713.8577 S1033s TMT10 1017 (R) WMEVIQGASSSAGRAPsIVQDGPQPSSGLEGMVR (G) WMEVIQGAS(0.0)S(0.0)S(0.0)AGRAPS(0.99)IVQDGPQPS(0.0)S(0.0)GLEGMVR s:Phosphorylated S FARP2 120799.1 1 10 733.1 235.57 HUMAN 1 4.2738 5.9465 SSAGRPASASPAPNA-p Q6W2J9;S569-p SSAGRPASASPAPNA 0.693213743392238 0.54025572841173 -0.059 -0.0663333333333333 2.98550620881052 3.59730576771353 -0.059 -0.0663333333333333 0.502862649324105 0.43678671754358 -0.717466906210133 -0.8391946356922 Q6W2J9 BCOR Q6W2J9.S569.p_BCOR Q6W2J9_S569sS571s_2_2_569_571 Q6W2J9 Q6W2J9|Q6W2J9-2|Q6W2J9-4|Q6W2J9-3 BCL-6 corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20091.20091.4 14.5 14.5 1.303 9 2 2 0 984.2165 3773.9129 S569s S571s TMT10 547 (R) MGGTDAVITNVSGSVSSAGRPAsAsPAPNANADGTK (T) MGGT(0.0)DAVIT(0.0)NVS(0.0)GS(0.0)VS(0.0)S(0.0)AGRPAS(0.99)AS(0.99)PAPNANADGT(0.0)K K:TMT10,s:Phosphorylated S BCOR 193725.6 5 14 459.1 305.76 HUMAN 1 -2.9855 -3.5973 SSAGVLVS_______-p Q9UHV9;S154-p SSAGVLVS_______ 0.303936907431484 0.0853828929867751 0.160666666666667 0.224 9.68996489636306 14.143756154234 0.160666666666667 0.224 0.107399809333729 0.038514510678083 1.92789349230601 2.71770010291813 Q9UHV9 PFDN2 Q9UHV9.S154.p_PFDN2 Q9UHV9_S154s _1_1_154_154 Q9UHV9 Q9UHV9 Prefoldin subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13884.13884.2 8.14 8.14 8.141 3 1 1 0 550.2831 1019.5934 S154s TMT10 146 (K) ASSAGVLVs (-) AS(0.0)S(0.0)AGVLVS(0.99) s:Phosphorylated S PFDN2 16704.6 2 1 6205.1 13.19 HUMAN 1 9.69 14.1438 SSAIPLQSPRNSGSF-p Q9ULD2;S1255-p SSAIPLQSPRNSGSF 0.528691586987314 0.251757745739687 0.217333333333333 -0.166666666666667 5.12173550577741 7.88805177102737 0.217333333333333 -0.166666666666667 0.307486780597607 0.162627813449225 1.12632068813015 -1.61522997766558 Q9ULD2 MTUS1 Q9ULD2.S1255.p_MTUS1 Q9ULD2_S1255s _1_1_1255_1255 Q9ULD2 Q9ULD2|Q9ULD2-2|Q9ULD2-6|Q9ULD2-3|Q9ULD2-7|Q9ULD2-4 Microtubule-associated tumor suppressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9726.9726.3 14.91 14.91 10.458 5 1 1 0 602.6547 1725.9809 S1255s TMT10 1244 (K) RSPTSSAIPLQsPR (N) RS(0.0)PT(0.0)S(0.0)S(0.0)AIPLQS(0.99)PR s:Phosphorylated S MTUS1 142763.7 1 13 645.1 254.81 HUMAN 1 5.1217 -7.8881 SSAKDLGSPGARALP-p P12755;S515-p SSAKDLGSPGARALP 0.20673574545356 0.00498241622483435 -0.206 -0.587 13.2327793861381 33.5810334161204 -0.206 -0.587 0.0475031119505059 0.000438426360557442 -2.55309836198355 -7.58616314744434 P12755 SKI P12755.S515.p_SKI P12755_S515s _1_1_515_515 P12755 P12755 Ski oncogene HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6688.6688.2 12.58 5.15 99 1 1 1 0 541.266 1001.5577 S515s TMT10 512 (K) DLGsPGAR (A) DLGS(1.0)PGAR s:Phosphorylated S SKI 81258.8 1 4 3633.1 46.5 HUMAN 1 -13.2328 -33.581 SSANLRHSPRVLVQH-p Q9Y2K7;S832-p SSANLRHSPRVLVQH 0.369805323847201 0.00390851163108543 0.159666666666667 -0.582666666666667 8.01212164071289 35.5298379088426 0.159666666666667 -0.582666666666667 0.158047574742063 0.000279908578759494 1.6372633344197 -8.29132486476728 Q9Y2K7 KDM2A Q9Y2K7.S832.p_KDM2A Q9Y2K7_S832s _1_1_832_832 Q9Y2K7 Q9Y2K7|I3VM54|Q9Y2K7-2|Q9Y2K7-5|Q9Y2K7-4 Lysine-specific demethylase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11884.11884.3 15.25 8.75 1.317 4 1 1 0 677.6949 1951.1035 S832s TMT10 819 (K) LQAITASSANLRHsPR (V) LQAIT(0.0)AS(0.0)S(0.0)ANLRHS(0.99)PR s:Phosphorylated S KDM2A 135243.8 5 12 409.1 323.7 HUMAN 1 8.0121 -35.5298 SSANNSVSPSESLRA-p H0YL70;S213-p SSANNSVSPSESLRA 0.726935837841591 0.612238582904788 0.055 0.0886666666666667 2.62749908642358 2.89494431035143 0.055 0.0886666666666667 0.546072229882032 0.513458761550391 0.643681594855191 0.698896178434954 H0YL70 TLE3 H0YL70.S213.p_TLE3 H0YL70_S213s _1_1_213_213 H0YL70 H0YL70|H0YKN8|H0YKT5|Q04726|Q04726-4|Q04726-5|Q04726-6|Q04726-3|Q04726-7|Q04726-2|H0YNT2|F5H7D6 Transducin-like enhancer protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4477.4477.2 18.46 12.16 2 6 1 1 0 964.9219 1848.8682 S213s Hydrogen 203 (R) ERESSANNSVsPSESLR (A) ERES(0.0)S(0.0)ANNS(0.0)VS(0.99)PS(0.0)ES(0.0)LR s:Phosphorylated S TLE3 85275.2 13 1 447.1 309.48 HUMAN 1 2.6275 2.8949 SSAQQNGSVSDISPV-p O00139-4;S135-p SSAQQNGSVSDISPV 0.612359630302695 0.732542102923323 0.143666666666667 0.06 3.94805197202668 1.86403530794902 0.143666666666667 0.06 0.402897713576948 0.65102320562352 0.907186602767231 0.478422431067544 O00139 KIF2A O00139.4.S135.p_KIF2A O00139-4_S135s _1_1_135_135 O00139-4 O00139-4|O00139-5|O00139-1 Isoform 4 of Kinesin-like protein KIF2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14783.14783.4 20.7 16.61 2.783 7 1 1 0 975.0077 3817.0447 S135s TMT10 118 (R) ARPSQFPEQSSSAQQNGsVSDISPVQAAKK (E) ARPS(0.0)QFPEQS(0.0)S(0.0)S(0.0)AQQNGS(0.99)VS(0.0)DIS(0.0)PVQAAKK K:TMT10,s:Phosphorylated S KIF2A 84772.1 3 3 1020.1 187.91 HUMAN 1 3.9481 1.864 SSASGYGSREGDRGV-p Q9NWH9;S929-p SSASGYGSREGDRGV 0.970811478408808 0.594112382562569 0.00733333333333333 0.0836666666666667 0.253246482560273 3.0609775255569 0.00733333333333333 0.0836666666666667 0.943355425942993 0.494199438289593 0.0744127578360985 0.732666500599387 Q9NWH9 SLTM Q9NWH9.S929.p_SLTM Q9NWH9_S929s _1_1_929_929 Q9NWH9 Q9NWH9|Q9NWH9-3 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5376.5376.4 11.46 11.46 1.417 6 1 1 0 570.5212 2199.0952 S929s TMT10 922 (R) SSASGYGsREGDRGVITDR (G) S(0.0)S(0.0)AS(0.0)GY(0.0)GS(0.99)REGDRGVIT(0.0)DR s:Phosphorylated S SLTM 117431.6 1 18 167.1 494.15 HUMAN 1 0.2532 3.061 SSASKTASPLEHILQ-p Q9BTC0;S1312-p SSASKTASPLEHILQ 0.528234856593507 0.107688041005898 -0.093 -0.220333333333333 5.12953019608357 12.7845643801633 -0.093 -0.220333333333333 0.306935400194396 0.0526676040576516 -1.12774306692536 -2.47098912911453 Q9BTC0 DIDO1 Q9BTC0.S1312.p_DIDO1 Q9BTC0_S1312s _1_1_1312_1312 Q9BTC0 Q9BTC0 Death-inducer obliterator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.37213.37213.2 17.3 17.3 2.405 3 1 1 0 1097.1063 2113.2421 S1312s TMT10 1310 (K) TAsPLEHILQTLFGK (K) T(0.0)AS(0.99)PLEHILQT(0.0)LFGK K:TMT10,s:Phosphorylated S DIDO1 245579.9 5 18 153.1 505.54 HUMAN 1 -5.1295 -12.7846 SSASLAASYAAQQHP-p Q96PK6;S527-p SSASLAASYAAQQHP 0.71764491565926 0.0739469982719304 -0.092 -0.273666666666667 2.71930233812071 15.0120348187498 -0.0920000000000001 -0.273666666666667 0.534650240095015 0.0315352674163705 -0.662799089761468 -2.87882821300615 Q96PK6 RBM14 Q96PK6.S527.p_RBM14 Q96PK6_S527s _1_1_527_527 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11158.11158.3 18.81 15.63 2.368 8 1 1 0 925.4417 2694.3433 S527s TMT10 518 (R) TQSSASLAAsYAAQQHPQAAASYR (G) T(0.0)QS(0.0)S(0.0)AS(0.0)LAAS(0.99)Y(0.0)AAQQHPQAAAS(0.0)Y(0.0)R s:Phosphorylated S RBM14 69661.6 1 12 151.1 510.8 HUMAN 1 -2.7193 -15.012 SSASLPRSPPPTVDE-p Q96JK2;S468-p SSASLPRSPPPTVDE 0.228055455381152 0.694231258802476 -0.205333333333333 0.0393333333333334 12.3422756251525 2.17633102415023 -0.205333333333333 0.0393333333333334 0.0583139469589372 0.605852490619165 -2.39319604371348 0.547441465751471 Q96JK2 DCAF5 Q96JK2.S468.p_DCAF5 Q96JK2_S468s _1_1_468_468 Q96JK2 Q96JK2|Q96JK2-3|Q96JK2-2 DDB1- and CUL4-associated factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20935.21143.4 21.28 21.28 1.139 10 1 1 0 967.4553 3786.8408 S468s TMT10 454 (R) SGYTDSESSASLPRsPPPTVDESADNAFHLGPLR (V) S(0.0)GY(0.0)T(0.0)DS(0.0)ES(0.0)S(0.0)AS(0.0)LPRS(0.99)PPPT(0.0)VDES(0.0)ADNAFHLGPLR s:Phosphorylated S DCAF5 105045.5 2 4 948.1 196.79 HUMAN 1 -12.3423 2.1763 SSASSLFSPSSTLFS-p Q5T1Z8;S842-p SSASSLFSPSSTLFS 0.50155645324426 0.0303707089430202 -0.109 -0.446 5.52713269846279 20.5190314128952 -0.109 -0.446 0.280082987485805 0.00887353892448062 -1.19984109959063 -3.98738076889623 Q5T1Z8 NotFound Q5T1Z8.S842.p_NotFound Q5T1Z8_S842s _1_1_842_842 Q5T1Z8 Q5T1Z8|Q5T1Z4|Q14671-3|Q14671-2|Q14671-4|E9PR38 Pumilio homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26264.26264.3 21.81 21.81 1.908 12 1 1 0 768.0322 2222.1138 S842s TMT10 833 (R) SASSASSLFsPSSTLFSSSR (L) S(0.0)AS(0.0)S(0.0)AS(0.0)S(0.0)LFS(0.99)PS(0.0)S(0.0)T(0.0)LFS(0.0)S(0.0)S(0.0)R s:Phosphorylated S PUM1 130847.9 3 12 720.1 237.18 HUMAN 1 -5.5271 -20.519 SSASTALSQDIPEIA-p Q6P2E9;S741-p SSASTALSQDIPEIA 0.464361215303493 0.0840700195246949 -0.0993333333333333 0.228333333333333 6.1477148325634 14.2359666627944 -0.0993333333333334 0.228333333333333 0.242788726293625 0.0377053810153413 -1.31083535441601 2.73467206283051 Q6P2E9 EDC4 Q6P2E9.S741.p_EDC4 Q6P2E9_S741s _1_1_741_741 Q6P2E9 Q6P2E9|Q6P2E9-2 Enhancer of mRNA-decapping protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34482.34482.4 20.6 17.83 1.109 8 1 1 0 739.121 2873.4941 S741s TMT10 729 (R) SPDVISSASTALsQDIPEIASEALSR (G) S(0.0)PDVIS(0.0)S(0.0)AS(0.0)T(0.0)ALS(0.99)QDIPEIAS(0.0)EALS(0.0)R s:Phosphorylated S EDC4 153084.9 1 13 177.1 481.34 HUMAN 1 -6.1477 14.236 SSATLLNSPDRARRL-p Q14244-7;S231-p SSATLLNSPDRARRL 0.633125556151465 0.00610086493342327 0.09 -0.498 3.69915984293724 31.9428856135696 0.09 -0.498 0.426662050005408 0.000639309913119971 0.859168421636999 -7.03362338389884 Q14244 MAP7 Q14244.7.S231.p_MAP7 Q14244-7_S231s _1_1_231_231 Q14244-7 A0A087WZ40|Q14244-7|Q14244-6|Q14244-3|Q14244-5 Isoform 7 of Ensconsin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11429.11429.3 16.9 16.9 8.183 6 1 1 0 638.328 1833.0028 S231s TMT10 220 (K) RLSSSSATLLNsPDR (A) RLS(0.0)S(0.0)S(0.0)S(0.0)AT(0.0)LLNS(0.99)PDR s:Phosphorylated S MAP7 87064.8 4 3 581.1 266.4 HUMAN 1 3.6992 -31.9429 SSATLWNSPSRNRSL-p Q3KQU3;S280-p SSATLWNSPSRNRSL 0.249209007658047 0.00295295766305267 0.166333333333333 -0.669 11.5127042887727 38.1218094044911 0.166333333333333 -0.669 0.0705877877466846 0.000154105826687255 2.24618788668289 -9.31784044549175 Q3KQU3 MAP7D1 Q3KQU3.S280.p_MAP7D1 Q3KQU3_S280s _1_1_280_280 Q3KQU3 Q3KQU3|Q3KQU3-4 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12810.12810.2 13.62 8.32 1.673 5 1 1 0 757.8637 1434.7539 S280s TMT10 273 (K) SSATLWNsPSR (N) S(0.0)S(0.0)AT(0.0)LWNS(0.99)PS(0.0)R s:Phosphorylated S MAP7D1 93160.6 1 9 160.1 495.56 HUMAN 1 11.5127 -38.1218 SSATRRESLSTSSDL-p Q8TB72;S587-p SSATRRESLSTSSDL 0.840952090017632 0.135566758967976 -0.0383333333333334 0.473666666666667 1.45325348721041 11.4378819755281 -0.0383333333333334 0.473666666666667 0.715607117212907 0.0718144440011387 -0.384002367014906 2.23195559984854 Q8TB72 PUM2 Q8TB72.S587.p_PUM2 Q8TB72_S587s _1_1_587_587 Q8TB72 Q8TB72|Q8TB72-3|Q8TB72-4 Pumilio homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11868.11868.3 10.94 10.94 1.125 6 1 1 0 641.9994 1844.0166 S587s TMT10 585 (R) REsLSTSSDLYK (R) RES(0.99)LS(0.0)T(0.0)S(0.0)S(0.0)DLY(0.0)K K:TMT10,s:Phosphorylated S PUM2 114784.2 1 8 944.1 197.75 HUMAN 1 -1.4533 11.4379 SSAVGSDSD______-p Q68E01;S1042-p SSAVGSDSD______ 0.0431670381948327 0.00752314179680432 0.676333333333333 0.496 30.2792595762871 30.3468942889042 0.676333333333333 0.496 0.000937721864430556 0.000923231409072985 6.51754091167057 6.52786024812624 Q68E01 INTS3 Q68E01.S1042.p_INTS3 Q68E01_S1042s _1_1_1042_1042 Q68E01 Q68E01|Q68E01-2|Q68E01-3|Q68E01-4 Integrator complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5384.5384.2 16.21 11.67 3.682 4 1 1 0 774.3712 1467.7691 S1042s TMT10 1033 (R) KGSSAVGSDsD (-) KGS(0.0)S(0.0)AVGS(0.0)DS(0.99)D K:TMT10,s:Phosphorylated S INTS3 119608.2 4 5 1627.1 125.71 HUMAN 1 30.2793 30.3469 SSAVPNHSPEKKDSD-p Q8N6H7;S146-p SSAVPNHSPEKKDSD 0.181080338359562 0.956808365155927 -0.233 0.01 14.6300881548634 0.274865374986393 -0.233 0.00999999999999998 0.0344342941079085 0.938671133669865 -2.80935751390567 0.0805742009745641 Q8N6H7 ARFGAP2 Q8N6H7.S146.p_ARFGAP2 Q8N6H7_S146s _1_1_146_146 Q8N6H7 Q8N6H7 ADP-ribosylation factor GTPase-activating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17216.17216.4 23.21 23.21 1.132 4 1 1 0 808.4115 3150.6609 S146s TMT10 129 (R) HGTDLWIDNMSSAVPNHsPEKK (D) HGT(0.0)DLWIDNMS(0.0)S(0.0)AVPNHS(0.99)PEKK K:TMT10,s:Phosphorylated S ARFGAP2 57061.7 6 2 866.1 210.19 HUMAN 1 -14.6301 0.2749 SSAYTSDSPGSYHNE-p Q96RE7;S274-p SSAYTSDSPGSYHNE 0.619237075441523 0.0450881171308284 0.0866666666666667 0.582666666666667 3.86798984394568 18.0126552304465 0.0866666666666667 0.582666666666667 0.410394012173649 0.0158028157644604 0.891810152715641 3.46199016113054 Q96RE7 NACC1 Q96RE7.S274.p_NACC1 Q96RE7_S274s _1_1_274_274 Q96RE7 Q96RE7 Nucleus accumbens-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11490.11490.4 23.2 23.2 1.167 12 1 1 0 1088.6766 4271.7065 S274s TMT10 262 (R) TSPGTSSAYTSDsPGSYHNEEDEEEDGGEEGMDEQYR (Q) T(0.0)S(0.0)PGT(0.0)S(0.0)S(0.0)AY(0.0)T(0.0)S(0.0)DS(0.99)PGS(0.0)Y(0.0)HNEEDEEEDGGEEGMDEQY(0.0)R s:Phosphorylated S NACC1 57941.9 1 3 2142.1 95.99 HUMAN 1 3.868 18.0127 SSDALSASFNGEMLG-p A7KAX9;S738-p SSDALSASFNGEMLG 0.196195992971549 0.396453203310499 0.202333333333333 0.082 13.7781313434339 5.34251643518774 0.202333333333333 0.082 0.041897379990429 0.292245852521489 2.6522726662941 1.16622243470568 A7KAX9 ARHGAP32 A7KAX9.S738.p_ARHGAP32 A7KAX9_S738s _1_1_738_738 A7KAX9 A7KAX9|A7KAX9-2|G3V174 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19151.19151.3 17.54 16.9 2.225 5 1 1 0 717.99 2071.9916 S738s TMT10 730 (R) SSSDALSAsFNGEMLGNR (C) S(0.0)S(0.0)S(0.0)DALS(0.0)AS(0.99)FNGEMLGNR s:Phosphorylated S ARHGAP32 232236.5 3 12 159.1 497.4 HUMAN 1 13.7781 5.3425 SSDASDASGEEGGRV-p P35269;S224-p SSDASDASGEEGGRV 0.623892094178248 0.00821940198621766 -0.11 0.893333333333333 3.80638553680484 29.6689611283241 -0.11 0.893333333333334 0.41625690071796 0.00107920484691484 -0.879934278781666 6.32215742953863 P35269 GTF2F1 P35269.S224.p_GTF2F1 P35269_S224s _1_1_224_224 P35269 P35269 General transcription factor IIF subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19610.19610.3 21.56 21.56 1.128 4 1 1 0 1133.1779 3317.5844 S224s TMT10 207 (R) IHDLEDDLEMSSDASDAsGEEGGRVPK (A) IHDLEDDLEMS(0.0)S(0.0)DAS(0.0)DAS(0.99)GEEGGRVPK K:TMT10,s:Phosphorylated S GTF2F1 58296.5 3 2 1159.1 171.17 HUMAN 1 -3.8064 29.669 SSDDSKRSPLGKTPL-p Q9C0B5;S593-p SSDDSKRSPLGKTPL 0.539855089249376 0.8166783711164 0.107666666666667 -0.0253333333333333 4.94402961117543 1.2307569297532 0.107666666666667 -0.0253333333333333 0.320329575998676 0.753224273198288 1.09379117463558 -0.330766463093259 Q9C0B5 ZDHHC5 Q9C0B5.S593.p_ZDHHC5 Q9C0B5_S593s _1_1_593_593 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7447.7447.4 12.61 8.91 2.573 7 1 1 0 580.5587 2239.2497 S593s TMT10 583 (R) TSSSSDDSKRsPLGK (T) T(0.0)S(0.0)S(0.0)S(0.0)S(0.0)DDS(0.0)KRS(0.99)PLGK K:TMT10,s:Phosphorylated S ZDHHC5 78285 7 17 134.1 530.74 HUMAN 1 4.944 -1.2308 SSDEDNDSDEAFESS-p Q6KC79;S1096-p SSDEDNDSDEAFESS 0.533293872472444 0.00229157720807913 -0.24 0.986666666666667 5.05436633973802 40.7159339053571 -0.24 0.986666666666667 0.31229380273405 8.48021004699306e-05 -1.11401176483704 10.4581163044307 Q6KC79 NIPBL Q6KC79.S1096.p_NIPBL Q6KC79_S1089sS1090sS1096s_3_3_1089_1096 Q6KC79 Q6KC79|Q6KC79-2 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17124.17124.4 10.75 10.75 6.085 6 3 3 0 773.809 2852.311 S1089s S1090s S1096s TMT10 1085 (K) YAEIssDEDNDsDEAFESSRK (R) Y(0.0)AEIS(0.99)S(0.99)DEDNDS(0.99)DEAFES(0.0)S(0.0)RK K:TMT10,s:Phosphorylated S NIPBL 318099.5 3 37 50.1 752.87 HUMAN 1 -5.0544 40.7159 SSDFTCGSPTAAGKK-p P20810-6;S326-p SSDFTCGSPTAAGKK 0.0635370415880919 0.685738501178587 -0.489666666666667 -0.04 25.8795597628434 2.2422313073714 -0.489666666666667 -0.04 0.00258252196336057 0.596728622066846 -5.2700473224521 -0.561733666118033 P20810 CAST P20810.6.S326.p_CAST P20810-6_S326s _1_1_326_326 P20810-6 P20810-6 Isoform 6 of Calpastatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26242.26242.5 28.15 24.79 1.394 8 1 1 0 946.2855 4647.427 S326s TMT10 296 (K) EGITGPPADSSKPIGPDDAIDALSSDFTCGsPTAAGKK (T) EGIT(0.0)GPPADS(0.0)S(0.0)KPIGPDDAIDALS(0.0)S(0.0)DFT(0.0)CGS(0.99)PT(0.0)AAGKK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CAST 85340.8 9 8 314.1 369.19 HUMAN 1 -25.8796 -2.2422 SSDGTEDSDFSTDLE-p O95251;S18-p SSDGTEDSDFSTDLE 0.0519525792237636 0.122378756412033 0.575 0.397 28.0807420926436 12.0319517303597 0.575 0.397 0.00155569978157667 0.0626332326087305 5.86878230195103 2.33683356600389 O95251 KAT7 O95251.S18.p_KAT7 O95251_S18sS21s_2_2_18_21 O95251 O95251|O95251-4|O95251-2 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10438.10438.4 12.44 12.44 1.21 13 2 2 0 935.3674 3578.5072 S18s S21s TMT10 7 (R) NAGSSSDGTEDsDFsTDLEHTDSSESDGTSRR (S) NAGS(0.0)S(0.0)S(0.0)DGT(0.0)EDS(0.99)DFS(0.99)T(0.0)DLEHT(0.0)DS(0.0)S(0.0)ES(0.0)DGT(0.0)S(0.0)RR s:Phosphorylated S KAT7 71325.8 2 14 691.1 243.06 HUMAN 1 28.0807 12.032 SSDILNYSGNLMEPP-p O14530;S188-p SSDILNYSGNLMEPP 0.998180995519267 0.7473747732744 -0.000333333333333338 0.031 0.0149019974042582 1.74577043170554 -0.000333333333333339 0.031 0.996574568514582 0.668995130815226 -0.00449501957729412 0.451684745684759 O14530 TXNDC9 O14530.S188.p_TXNDC9 O14530_S188s _1_1_188_188 O14530 O14530 Thioredoxin domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30464.30668.3 19.11 15.24 2.192 4 1 1 0 997.4966 2910.5072 S188s TMT10 179 (R) LGSSDILNYsGNLMEPPFQNQK (K) LGS(0.0)S(0.0)DILNY(0.0)S(0.99)GNLMEPPFQNQK K:TMT10,s:Phosphorylated S TXNDC9 26704.7 14 1 3505.1 49.53 HUMAN 1 -0.0149 1.7458 SSDLNGNSVSDEQDE-p Q2LD37;S1969-p SSDLNGNSVSDEQDE 0.0576036189507777 0.0746740062189611 0.531666666666667 0.257 27.063643239116 14.9536194977391 0.531666666666667 0.257 0.00196623614809681 0.031962301966874 5.58614774251386 2.86789266346078 Q2LD37 KIAA1109 Q2LD37.S1969.p_KIAA1109 Q2LD37_S1969sS1971s_2_2_1969_1971 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7|Q2LD37-6|Q2LD37-2 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16515.16515.4 14.62 14.62 1.262 7 2 2 0 925.9252 3539.744 N1968n S1969s S1971s TMT10 1959 (R) TSPSSDLNGnsVsDEQDEGVESDDLKK (D) T(0.0)S(0.0)PS(0.0)S(0.0)DLN(0.0)GN(0.99)S(0.99)VS(0.99)DEQDEGVES(0.0)DDLKK K:TMT10,n:Deamidated,s:Phosphorylated S KIAA1109 559693.9 2 36 143.1 520.8 HUMAN 1 27.0636 14.9536 SSDLVAPSPDAFRST-p Q12888-2;S371-p SSDLVAPSPDAFRST 0.597918768837268 0.128782702969415 0.0696666666666667 0.158666666666667 4.12415154326771 11.7363432646097 0.0696666666666667 0.158666666666667 0.386887631313458 0.0670448886058576 0.940788112859166 2.28454413790247 Q12888 TP53BP1 Q12888.2.S371.p_TP53BP1 Q12888-2_S371s_1_1_371_371 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26577.26577.3 21.41 17.91 5.048 7 1 1 0 906.1043 2635.3413 N363n S371s TMT10 354 (R) SLVQDSLSTnSSDLVAPsPDAFR (S) S(0.0)LVQDS(0.0)LS(0.0)T(0.0)N(1.0)S(0.0)S(0.0)DLVAPS(0.99)PDAFR n:Deamidated,s:Phosphorylated S TP53BP1 216167.2 8 17 3.1 2297.07 HUMAN 1 4.1242 11.7363 SSDPFLNSGTYHSRD-p P46937-9;S392-p SSDPFLNSGTYHSRD 0.12869352151856 0.854472229168741 -0.391 -0.023 18.4455934239954 0.962380023828214 -0.391 -0.023 0.0143034452386848 0.801238847543804 -3.55301286746047 -0.264389137419849 P46937 YAP1 P46937.9.S392.p_YAP1 P46937-9_S392s _1_1_392_392 P46937-9 P46937-9|P46937-8|P46937-2|P46937-7|P46937-6 Isoform 9 of Transcriptional coactivator YAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19738.19738.4 15.1 15.1 1.145 17 1 1 0 1056.7184 4143.8709 S392s TMT10 380 (R) TMTTNSSDPFLNsGTYHSRDESTDSGLSMSSYSVPR (T) T(0.0)MT(0.0)T(0.0)NS(0.0)S(0.0)DPFLNS(0.99)GT(0.0)Y(0.0)HS(0.0)RDES(0.0)T(0.0)DS(0.0)GLS(0.0)MS(0.0)S(0.0)Y(0.0)S(0.0)VPR s:Phosphorylated S YAP1 54998.2 1 18 436.1 313.01 HUMAN 1 -18.4456 -0.9624 SSDSAQGSDMSLTAC-p A0A140T8Y4;S362-p SSDSAQGSDMSLTAC 0.721843173945445 0.0750180027556397 -0.073 -0.206333333333333 2.67750651445841 14.9294154973265 -0.073 -0.206333333333333 0.539820469463529 0.0321409308375978 -0.654112940152143 -2.86336575460669 A0A140T8Y4 NotFound A0A140T8Y4.S362.p_NotFound A0A140T8Y4_S362s _1_1_362_362 A0A140T8Y4 A0A140T8Y4|P30453|P30456|P30457|P30459|B0UXQ0|Q9GJ45 HLA class I histocompatibility antigen, A-3 alpha chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15189.15189.3 24.32 24.32 2.627 9 1 1 0 1120.8741 3280.6393 S362s TMT10 346 (R) KGGSYSQAASSDSAQGsDMSLTACKV (-) KGGS(0.0)Y(0.0)S(0.0)QAAS(0.0)S(0.0)DS(0.0)AQGS(0.99)DMS(0.0)LT(0.0)ACKV K:TMT10,C:Carbamidomethylation,s:Phosphorylated S HLA-A 41906 6 1 3870.1 41.51 HUMAN 1 -2.6775 -14.9294 SSDSAQGSDVSLTA_-p Q29940;S356-p SSDSAQGSDVSLTA_ 0.221798193479614 0.128782702969415 0.322666666666667 -0.306333333333333 12.5877943084938 11.7363271193473 0.322666666666667 -0.306333333333333 0.0551087511248704 0.0670451378513292 2.4370481477812 -2.28454128769686 Q29940 NotFound Q29940.S356.p_NotFound Q29940_S356sS359s_2_2_356_359 Q29940 P30490|P30491|P30492|P30493|Q29836|P10319|P30464|P18463|Q95365|P30483|P30487|P30488|P18464|Q29940|P30498|Q29718|P30466|P30685|P30475|P30484|P30495 HLA class I histocompatibility antigen, B-59 alpha chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8936.8936.4 15.81 15.81 1.144 11 2 2 0 899.1837 3433.7762 S356s S359s TMT10 334 (R) RKSSGGKGGSYSQAASSDSAQGsDVsLTA (-) RKS(0.0)S(0.0)GGKGGS(0.0)Y(0.0)S(0.0)QAAS(0.0)S(0.0)DS(0.0)AQGS(0.99)DVS(0.99)LT(0.0)A K:TMT10,s:Phosphorylated S HLA-B 40868.9 1 1 5856.1 15.81 HUMAN 1 12.5878 -11.7363 SSDSDEGSEEDKAQR-p Q8WVC0;S614-p SSDSDEGSEEDKAQR 0.732725172885021 0.0105407926544461 -0.103666666666667 0.574666666666667 2.55681269272408 27.7299059175681 -0.103666666666667 0.574666666666667 0.555032904733835 0.00168658956205578 -0.628863194743473 5.76185780067035 Q8WVC0 LEO1 Q8WVC0.S614.p_LEO1 Q8WVC0_S614s _1_1_614_614 Q8WVC0 Q8WVC0|Q8WVC0-2 RNA polymerase-associated protein LEO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11460.11460.2 17.43 15.32 2.525 5 1 1 0 1049.9585 2018.9442 S614s TMT10 605 (R) IYSSDSDEGsEEDK (A) IY(0.0)S(0.0)S(0.0)DS(0.0)DEGS(0.99)EEDK K:TMT10,s:Phosphorylated S LEO1 75516.9 4 13 514.1 286.88 HUMAN 1 -2.5568 27.7299 SSDSGAESEEEEAQE-p Q5T8D3-3;S191-p SSDSGAESEEEEAQE 0.342559001712462 0.962290182291263 0.176 -0.00699999999999999 8.64326505633887 0.237891211557555 0.176 -0.007 0.136670094391606 0.946696733983997 1.74661085970404 -0.0700081650320746 Q5T8D3 ACBD5 Q5T8D3.3.S191.p_ACBD5 Q5T8D3-3_S187sS191s_2_2_187_191 Q5T8D3-3 Q5T8D3|Q5T8D3-3|B7Z2R7|Q5T8D3-2|Q5T8D3-4 Isoform 3 of Acyl-CoA-binding domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16173.16173.5 20.58 20.58 1.128 5 2 2 0 858.5923 4128.9986 S187s S191s TMT10 182 (K) AESSDsGAEsEEEEAQEEVKGAEQSDNDKK (M) AES(0.0)S(0.0)DS(0.99)GAES(0.99)EEEEAQEEVKGAEQS(0.0)DNDKK K:TMT10,s:Phosphorylated S ACBD5 59375.9 13 7 760.1 230.2 HUMAN 1 8.6433 -0.2379 SSDSIDHSPAKKRVR-p Q9H5I1;S388-p SSDSIDHSPAKKRVR 0.207422631751664 0.00267247558884885 -0.289 -0.892 13.1865321204234 39.0967432960719 -0.289 -0.892 0.0480116672991961 0.00012311916754154 -2.54473397688796 -9.7324174383609 Q9H5I1 SUV39H2 Q9H5I1.S388.p_SUV39H2 Q9H5I1_S388s _1_1_388_388 Q9H5I1 Q9H5I1|Q9H5I1-2|Q9H5I1-3 Histone-lysine N-methyltransferase SUV39H2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8203.8203.3 12.4 12.4 2.498 5 1 1 0 823.4259 2388.2974 S388s TMT10 376 (K) GSGDISSDSIDHsPAKK (R) GS(0.0)GDIS(0.0)S(0.0)DS(0.0)IDHS(0.99)PAKK K:TMT10,s:Phosphorylated S SUV39H2 47822.6 4 1 4658.1 28.3 HUMAN 1 -13.1865 -39.0967 SSDSPVKTPIKVKVI-p Q9Y426;T445-p SSDSPVKTPIKVKVI 0.106843101544198 0.00104745705872082 -0.304 -1.18066666666667 20.4468830895599 50.998492148743 -0.304 -1.18066666666667 0.00902218423089233 7.94604069860184e-06 -3.97551944333267 -16.3845581628706 Q9Y426 C2CD2 Q9Y426.T445.p_C2CD2 Q9Y426_S435sT445t_2_2_435_445 Q9Y426 Q9Y426|Q9Y426-3|Q9Y426-2 C2 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18403.18403.5 13.86 13.86 1.309 5 2 2 0 580.9136 2740.6176 S435s T445t TMT10 429 (R) VDVGRAsPLSSDSPVKtPIK (V) VDVGRAS(0.99)PLS(0.0)S(0.0)DS(0.0)PVKT(0.99)PIK K:TMT10,s:Phosphorylated S,t:Phosphorylated T C2CD2 76045.3 6 7 1354.1 150.76 HUMAN 1 -20.4469 -50.9985 SSDTEQQSPTSGGGK-p P23588;S504-p SSDTEQQSPTSGGGK 0.57686855543634 0.0357280708410532 0.0843333333333333 -0.294666666666667 4.39558489252105 19.4774396011061 0.0843333333333333 -0.294666666666667 0.363447353439648 0.0112786219546083 0.992030216572402 -3.76428440443019 P23588 EIF4B P23588.S504.p_EIF4B P23588_S504s _1_1_504_504 P23588 E7EX17|P23588|P23588-2 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5004.5004.3 17.31 17.31 2.508 7 1 1 0 740.3459 2139.0566 S504s TMT10 495 (R) SQSSDTEQQsPTSGGGK (V) S(0.0)QS(0.0)S(0.0)DT(0.0)EQQS(0.99)PT(0.0)S(0.0)GGGK K:TMT10,s:Phosphorylated S EIF4B 69207 3 19 146.1 516.36 HUMAN 1 4.3956 -19.4774 SSDVCRLTPA_____-p Q8TC07-2;T672-p SSDVCRLTPA_____ 0.866211535077826 0.0565819592607696 0.0376666666666667 -0.227666666666667 1.21390380131031 16.6236402941096 0.0376666666666667 -0.227666666666667 0.756152896107528 0.021758851618956 0.326705553372344 -3.18650949938968 Q8TC07 TBC1D15 Q8TC07.2.T672.p_TBC1D15 Q8TC07-2_T672t _1_1_672_672 Q8TC07-2 Q8TC07-3|Q8TC07-2 Isoform 2 of TBC1 domain family member 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18722.18722.3 12.26 8.66 1.342 5 1 1 0 789.3817 2286.1597 T672t TMT10 656 (R) NDSPTQIPVSSDVCRLtPA (-) NDS(0.0)PT(0.0)QIPVS(0.0)S(0.0)DVCRLT(0.99)PA C:Carbamidomethylation,t:Phosphorylated T TBC1D15 78306.6 1 10 1180.1 169.17 HUMAN 1 1.2139 -16.6236 SSEEEYDSGVEEEGW-p O76031;S617-p SSEEEYDSGVEEEGW 0.852134949471934 0.286266810510293 0.0306666666666667 -0.236666666666667 1.34592622449502 7.16666248957172 0.0306666666666667 -0.236666666666667 0.733512260789619 0.192014378545459 0.358532783892094 -1.48973477464118 O76031 CLPX O76031.S617.p_CLPX O76031_S617s _1_1_617_617 O76031 O76031 ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15264.15466.3 21.56 21.56 5.676 4 1 1 0 808.3322 2343.0098 S617s TMT10 609 (K) ESSEEEYDsGVEEEGWPR (Q) ES(0.0)S(0.0)EEEY(0.0)DS(0.99)GVEEEGWPR s:Phosphorylated S CLPX 69964.2 4 2 3409.1 51.77 HUMAN 1 1.3459 -7.1667 SSEENLSSEDEELPC-p P38398;S1218-p SSEENLSSEDEELPC 0.8930597643092 0.00695221592447754 0.021 -0.560333333333333 0.961743553356484 30.9358899329999 0.021 -0.560333333333334 0.801356279898742 0.000806140994332204 0.264254477995024 -6.71092516440596 P38398 BRCA1 P38398.S1218.p_BRCA1 P38398_S1217sS1218s_2_2_1217_1218 P38398 P38398-7|P38398-4|P38398-8|Q5YLB2 Breast cancer type 1 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31676.32290.4 17.64 17.64 7.069 4 2 2 0 978.9707 3752.9296 S1217s S1218s TMT10 1208 (K) KLESSEENLssEDEELPCFQHLLFGK (V) KLES(0.0)S(0.0)EENLS(0.99)S(0.99)EDEELPCFQHLLFGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BRCA1 210227.6 8 26 106.1 588.91 HUMAN 1 0.9617 -30.9359 SSEGRRVSFGVDEEE-p J3QTA6;S13-p SSEGRRVSFGVDEEE 0.25815125980246 0.0150006118505849 0.167666666666667 0.363 11.1777967152611 25.2374754940563 0.167666666666667 0.363 0.0762465729892586 0.00299400451268906 2.18728752151371 5.09773302002115 J3QTA6 NotFound J3QTA6.S13.p_NotFound J3QTA6_S13s _1_1_13_13 J3QTA6 J3QTA6|Q9BRQ6|J3QTB2 MICOS complex subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11032.11032.4 14.73 14.73 99 1 1 1 0 472.49 1806.966 S13s TMT10 11 (R) RVsFGVDEEERVR (V) RVS(1.0)FGVDEEERVR s:Phosphorylated S CHCHD6 29102.3 3 1 3483.1 49.92 HUMAN 1 11.1778 25.2375 SSEGTGLSALLPQPK-p Q92733;S181-p SSEGTGLSALLPQPK 0.73218654364503 0.468587834798928 -0.0473333333333333 0.0743333333333333 2.56669858275104 4.38893426413311 -0.0473333333333334 0.0743333333333333 0.553770914501168 0.364004349925373 -0.63094089425224 0.990602183492087 Q92733 PRCC Q92733.S181.p_PRCC Q92733_S181s _1_1_181_181 Q92733 Q92733 Proline-rich protein PRCC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31954.31954.3 16.33 12.93 2.141 5 1 1 0 845.7977 2455.4172 S181s TMT10 169 (K) TILQGSSEGTGLsALLPQPK (N) T(0.0)ILQGS(0.0)S(0.0)EGT(0.0)GLS(0.99)ALLPQPK K:TMT10,s:Phosphorylated S PRCC 52416.8 1 7 1101.1 177.58 HUMAN 1 -2.5667 4.3889 SSEKGNFSPLELDNV-p Q52LW3;S190-p SSEKGNFSPLELDNV 0.220064165431429 0.525187362237322 -0.287 -0.0603333333333333 12.6569885354377 3.75765147660286 -0.287 -0.0603333333333333 0.054237685246769 0.420954205197504 -2.44943788523226 -0.870370450602482 Q52LW3 ARHGAP29 Q52LW3.S190.p_ARHGAP29 Q52LW3_S190s _1_1_190_190 Q52LW3 Q52LW3|F8VWZ8|Q52LW3-2 Rho GTPase-activating protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.34914.34914.3 11.77 8 99 1 1 1 0 699.7183 2017.1734 S190s TMT10 187 (K) GNFsPLELDNVLLK (N) GNFS(1.0)PLELDNVLLK K:TMT10,s:Phosphorylated S ARHGAP29 143601.5 2 6 517.1 284.75 HUMAN 1 -12.657 -3.7577 SSENMDGSNPALNVL-p Q14669-3;S1161-p SSENMDGSNPALNVL 0.621729850184917 0.977526969917737 -0.085 -0.00299999999999998 3.83726819969802 0.141394917709599 -0.085 -0.00299999999999999 0.413307398971083 0.967966903417647 -0.885892633270568 -0.0420460707351895 Q14669 TRIP12 Q14669.3.S1161.p_TRIP12 Q14669-3_S1161s _1_1_1161_1161 Q14669-3 Q14669-3|Q14669-2|Q14669-4 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25531.25531.3 19.2 19.2 6.791 4 1 1 0 817.7126 2371.155 S1161s TMT10 1152 (R) YFSSENMDGsNPALNVLQR (L) Y(0.0)FS(0.0)S(0.0)ENMDGS(0.99)NPALNVLQR s:Phosphorylated S TRIP12 227456.1 2 15 234.1 420.47 HUMAN 1 -3.8373 -0.1414 SSENSSSTPEECEEM-p O00567;T468-p SSENSSSTPEECEEM 0.814399806622497 0.0506792864412714 0.033 0.232 1.7120109182481 17.3028892675261 0.033 0.232 0.674215772582494 0.0186084874223371 0.444036165853882 3.31994525271198 O00567 NOP56 O00567.T468.p_NOP56 O00567_S467sT468t_2_2_467_468 O00567 O00567 Nucleolar protein 56 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19460.19460.4 13.9 13.9 1.184 7 2 2 0 979.4691 3738.9133 S467s T468t M475m TMT10 453 (K) RLAALALASSENSSstPEECEEmSEKPK (K) RLAALALAS(0.0)S(0.0)ENS(0.0)S(0.0)S(0.99)T(0.99)PEECEEM(1.0)S(0.0)EKPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T,m:Oxidized methionine NOP56 66448.1 23 13 262.1 396.77 HUMAN 1 1.712 17.3029 SSEPVGIYQGFEKKT-p Q05655;Y313-p SSEPVGIYQGFEKKT 0.549780068218602 0.191599053723448 -0.0923333333333333 -0.176333333333333 4.79368127508192 9.43644543981265 -0.0923333333333334 -0.176333333333333 0.331613248103835 0.113855877819181 -1.06610985090986 -1.88323112512829 Q05655 PRKCD Q05655.Y313.p_PRKCD Q05655_Y313y _1_1_313_313 Q05655 Q05655-2 Protein kinase C delta type GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16914.17044.3 26.69 23.58 26.695 5 1 1 0 832.4122 2415.2556 Y313y TMT10 301 (R) RSDSASSEPVGIyQGFEK (K) RS(0.0)DS(0.0)AS(0.0)S(0.0)EPVGIY(0.99)QGFEK K:TMT10,y:Phosphorylated Y PRKCD 78701.8 5 2 10.1 97.65 HUMAN 1 -4.7937 -9.4364 SSERGSKSPLKRAQE-p Q49A26;S158-p SSERGSKSPLKRAQE 0.148892042645734 0.0311646019213268 -0.413333333333333 -0.993333333333333 16.6883753752764 20.3496467883711 -0.413333333333333 -0.993333333333334 0.021436923714494 0.00922646462924665 -3.20150711232211 -3.95061385588316 Q49A26 GLYR1 Q49A26.S158.p_GLYR1 Q49A26_S158s _1_1_158_158 Q49A26 Q49A26|Q49A26-3|Q49A26-2|Q49A26-4 Putative oxidoreductase GLYR1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5956.5956.3 7.29 7.29 2.477 2 1 1 0 418.9122 1174.756 S158s Hydrogen 155 (R) GSKsPLK (R) GS(0.0)KS(0.99)PLK K:TMT10-Lys-Only,s:Phosphorylated S GLYR1 61125.9 6 4 2303.1 88.97 HUMAN 1 -16.6884 -20.3496 SSERNSSSPVSLDAA-p Q70EL1;S671-p SSERNSSSPVSLDAA 0.296077692655468 0.297895274342345 -0.149333333333333 -0.123 9.95412402306377 6.94191495849269 -0.149333333333333 -0.123 0.101061932304502 0.202212735436264 -1.97374131159642 -1.45044445984183 Q70EL1 USP54 Q70EL1.S671.p_USP54 Q70EL1_S671s _1_1_671_671 Q70EL1 Q70EL1|Q70EL1-7|Q70EL1-6 Inactive ubiquitin carboxyl-terminal hydrolase 54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19492.19492.3 20.19 17.45 1.11 8 1 1 0 1043.8589 3049.5842 S671s TMT10 668 (R) NSSsPVSLDAALPESSNVYRDPSAK (R) NS(0.0)S(0.0)S(0.99)PVS(0.0)LDAALPES(0.0)S(0.0)NVY(0.0)RDPS(0.0)AK K:TMT10,s:Phosphorylated S USP54 189724.2 6 7 525.1 282.54 HUMAN 1 -9.9541 -6.9419 SSESSPPSPQPTKVS-p Q9UQ35;S424-p SSESSPPSPQPTKVS 0.769192567611738 0.0715513637789286 -0.048 0.296666666666667 2.18573225031021 15.2249225571571 -0.048 0.296666666666667 0.604542412750337 0.0300267096363289 -0.549551920562582 2.91880322810711 Q9UQ35 SRRM2 Q9UQ35.S424.p_SRRM2 Q9UQ35_S424s _1_1_424_424 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11919.11919.3 18.89 18.89 2.771 8 1 1 0 793.7327 2299.2182 S424s TMT10 412 (K) LPQSSSSESSPPsPQPTK (V) LPQS(0.0)S(0.0)S(0.0)S(0.0)ES(0.0)S(0.0)PPS(0.99)PQPT(0.0)K K:TMT10,s:Phosphorylated S SRRM2 300351.7 3 14 2.1 3310.34 HUMAN 1 -2.1857 15.2249 SSESYTQSFQSRKPF-p Q9BTU6;S468-p SSESYTQSFQSRKPF 0.0917156286406609 0.00463734855393385 0.482333333333333 0.629333333333333 22.088315536167 34.1497677694988 0.482333333333333 0.629333333333334 0.00618256151788743 0.000384612347890422 4.34215407295476 7.78639890777201 Q9BTU6 PI4K2A Q9BTU6.S468.p_PI4K2A Q9BTU6_S468s _1_1_468_468 Q9BTU6 Q9BTU6|E9PAM4 Phosphatidylinositol 4-kinase type 2-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8014.8014.2 15.94 15.94 2.33 8 1 1 0 901.8935 1722.8132 S468s TMT10 460 (R) SSSESYTQsFQSR (K) S(0.0)S(0.0)S(0.0)ES(0.0)Y(0.0)T(0.0)QS(0.99)FQS(0.0)R s:Phosphorylated S PI4K2A 54420.7 2 5 2560.1 78.53 HUMAN 1 22.0883 34.1498 SSEVATESPLDFTKY-p Q8WTT2;S787-p SSEVATESPLDFTKY 0.388105146686967 0.029143491652482 -0.181 0.315333333333333 7.60351257629452 20.7847944619363 -0.181 0.315333333333333 0.173639586267405 0.00834681050199263 -1.56629496071097 4.04546025598744 Q8WTT2 NOC3L Q8WTT2.S787.p_NOC3L Q8WTT2_S787s _1_1_787_787 Q8WTT2 Q8WTT2 Nucleolar complex protein 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18084.18084.3 17.55 17.55 2.436 6 1 1 0 790.0656 2288.2174 S787s TMT10 778 (K) RYSSEVATEsPLDFTK (Y) RY(0.0)S(0.0)S(0.0)EVAT(0.0)ES(0.99)PLDFT(0.0)K K:TMT10,s:Phosphorylated S NOC3L 93002.5 2 2 4597.1 29.03 HUMAN 1 -7.6035 20.7848 SSEVDRFSPSGSVVP-p Q5TC79;S310-p SSEVDRFSPSGSVVP 0.411382195733206 0.219459707031869 0.127666666666667 0.149 7.11891122483217 8.67040728688985 0.127666666666667 0.149 0.194137251818924 0.135818606819715 1.481812363767 1.75070487061312 Q5TC79 ZBTB37 Q5TC79.S310.p_ZBTB37 Q5TC79_S310s _1_1_310_310 Q5TC79 Q5TC79|Q5TC79-2 Zinc finger and BTB domain-containing protein 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16188.16188.4 16.04 9.2 1.293 7 1 1 0 721.3728 2802.4947 S310s TMT10 298 (K) VARPTSSEVDRFsPSGSVVPLTER (H) VARPT(0.0)S(0.0)S(0.0)EVDRFS(0.99)PS(0.0)GS(0.0)VVPLT(0.0)ER s:Phosphorylated S ZBTB37 56681.5 3 1 3301.1 54.42 HUMAN 1 7.1189 8.6704 SSEWKNVSQHLEDLE-p P46939;S784-p SSEWKNVSQHLEDLE 0.887456189668158 0.387592767754703 0.023 0.139 1.01053751577014 5.47189434459548 0.023 0.139 0.792403250578367 0.283668142941758 0.276519567648127 1.18961536911734 P46939 UTRN P46939.S784.p_UTRN P46939_S784s _1_1_784_784 P46939 P46939-2 Utrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12340.12340.3 12.52 12.52 99 1 1 1 0 669.3527 1926.0809 S784s TMT10 782 (K) NVsQHLEDLERK (I) NVS(1.0)QHLEDLERK K:TMT10,s:Phosphorylated S UTRN 396684.3 1 2 527.1 282.18 HUMAN 1 1.0105 5.4719 SSEYGSVSPDTELKV-p Q99683;S986-p SSEYGSVSPDTELKV 0.245141443566405 0.0568357132338373 0.216 -0.241 11.6744272099586 16.5959720662369 0.216 -0.241 0.0680075734128338 0.0218979163976389 2.27471661133092 -3.1811238808093 Q99683 MAP3K5 Q99683.S986.p_MAP3K5 Q99683_S986s _1_1_986_986 Q99683 Q99683|Q99683-2 Mitogen-activated protein kinase kinase kinase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36503.36503.4 21.64 21.64 1.136 12 1 1 0 1153.3486 4530.3998 S986s TMT10 964 (R) SISLPVPVLVEDTSSSSEYGSVsPDTELKVDPFSFK (T) S(0.0)IS(0.0)LPVPVLVEDT(0.0)S(0.0)S(0.0)S(0.0)S(0.0)EY(0.0)GS(0.0)VS(0.99)PDT(0.0)ELKVDPFS(0.0)FK K:TMT10,s:Phosphorylated S MAP3K5 155846.3 2 1 3812.1 42.57 HUMAN 1 11.6744 -16.596 SSFLKSPTPPPSSKP-p Q8NEM7-3;T494-p SSFLKSPTPPPSSKP 0.224262912799076 0.0614106167463853 -0.194 0.220333333333333 12.4749526041827 16.1361853557825 -0.194 0.220333333333333 0.0565593929546186 0.0243434128440693 -2.41687248134431 3.09217513957626 Q8NEM7 SUPT20H Q8NEM7.3.T494.p_SUPT20H Q8NEM7-3_T494t _1_1_494_494 Q8NEM7-3 Q8NEM7-3|F6S7C4|Q8NEM7-2|R4GND2|B4E2D5 Isoform 3 of Transcription factor SPT20 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9578.9793.3 12.94 12.94 1.641 6 1 1 0 691.7096 1993.1482 T494t TMT10 492 (K) SPtPPPSSKPSSIPR (K) S(0.0)PT(0.99)PPPS(0.0)S(0.0)KPS(0.0)S(0.0)IPR K:TMT10,t:Phosphorylated T SUPT20H 89009.7 5 4 1696.1 120.52 HUMAN 1 -12.475 16.1362 SSFRQPFTPTSRSLL-p P57740;T64-p SSFRQPFTPTSRSLL 0.827854838432282 0.0108124644939892 -0.0313333333333333 -0.463333333333333 1.57742427881772 27.5541245179705 -0.0313333333333334 -0.463333333333333 0.695436646066533 0.00175625489700111 -0.413043703553087 -5.71302696565715 P57740 NUP107 P57740.T64.p_NUP107 P57740_T64t _1_1_64_64 P57740 P57740|G3V1T4 Nuclear pore complex protein Nup107 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13299.13299.3 9.07 9.07 1.408 6 1 1 0 639.9864 1837.9758 T64t TMT10 55 (R) TPSSFRQPFtPTSR (S) T(0.0)PS(0.0)S(0.0)FRQPFT(0.99)PT(0.0)S(0.0)R t:Phosphorylated T NUP107 107113.9 2 6 1162.1 171.06 HUMAN 1 -1.5774 -27.5541 SSFRSDASGDRGFGL-p Q8TDM6;S900-p SSFRSDASGDRGFGL 0.379616508329154 0.656492981752367 0.143333333333333 0.0436666666666667 7.77082320702456 2.49785990301668 0.143333333333333 0.0436666666666667 0.167077388839774 0.562618501528423 1.59537766451783 0.616358402456252 Q8TDM6 DLG5 Q8TDM6.S900.p_DLG5 Q8TDM6_S897sS900s_2_2_897_900 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-3 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21619.21619.4 10.37 5.06 2.094 5 2 2 0 655.0559 2457.2684 S897s S900s TMT10 891 (R) SLSSFRsDAsGDRGFGLVDVR (G) S(0.0)LS(0.0)S(0.0)FRS(0.99)DAS(0.99)GDRGFGLVDVR s:Phosphorylated S DLG5 215575.4 2 44 34.1 890.58 HUMAN 1 7.7708 2.4979 SSFSRRSSVAQEDSK-p A1L390;S618-p SSFSRRSSVAQEDSK 0.924321201525548 0.15510277285571 0.023 -0.232666666666667 0.672857879518758 10.6437469628788 0.023 -0.232666666666667 0.856474056074022 0.0862234316786623 0.189677373649893 -2.09289913376734 A1L390 PLEKHG3 A1L390.S618.p_PLEKHG3 A1L390_S617sS618s_2_2_617_618 A1L390 A1L390|A1L390-3|A1L390-2|G3V311 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3252.3252.2 9.85 9.85 9.847 3 2 2 0 748.324 1335.7066 S617s S618s Hydrogen 616 (R) RssVAQEDSK (S) RS(0.99)S(0.99)VAQEDS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S PLEKHG3 135322.7 3 30 284.1 386.18 HUMAN 1 0.6729 -10.6437 SSFSRVGSSNFRGGL-p P05787;S43-p SSFSRVGSSNFRGGL 0.244940656384147 0.359616751878865 0.247 -0.103666666666667 11.6832002311479 5.89241106365571 0.247 -0.103666666666667 0.0678703325092392 0.257489126308872 2.27626591067217 -1.26507780825399 P05787 KRT8 P05787.S43.p_KRT8 P05787_S43s _1_1_43_43 P05787 P05787|P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4692.4692.2 11.41 7.64 1.6 2 1 1 0 423.6789 766.3842 S43s Hydrogen 41 (R) VGsSNFR (G) VGS(0.99)S(0.0)NFR s:Phosphorylated S KRT8 53703.3 6 14 69.1 672.47 HUMAN 1 11.6832 -5.8924 SSFTQGDSWGEGEVD-p Q8N6S5;S36-p SSFTQGDSWGEGEVD 0.304096788172454 0.54461935684342 0.144333333333333 0.0896666666666667 9.68563578375617 3.54919926243321 0.144333333333333 0.0896666666666667 0.107506920452445 0.441651870134042 1.9271426330043 0.829784993033032 Q8N6S5 ARL6IP6 Q8N6S5.S36.p_ARL6IP6 Q8N6S5_S36s _1_1_36_36 Q8N6S5 Q8N6S5 ADP-ribosylation factor-like protein 6-interacting protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16575.16575.4 21.23 21.23 6.351 7 1 1 0 1119.7538 4396.001 S36s TMT10 15 (R) RGPGTPGPVARPSYSSFTQGDsWGEGEVDEEEGCDQVAR (D) RGPGT(0.0)PGPVARPS(0.0)Y(0.0)S(0.0)S(0.0)FT(0.0)QGDS(0.99)WGEGEVDEEEGCDQVAR C:Carbamidomethylation,s:Phosphorylated S ARL6IP6 24961.1 1 4 1404.1 146.21 HUMAN 1 9.6856 3.5492 SSFVHQASFKFGQGD-p P49792;S1456-p SSFVHQASFKFGQGD 0.12148283627608 0.627869013466998 0.281333333333333 -0.0583333333333333 19.0340224702585 2.74921571243315 0.281333333333333 -0.0583333333333334 0.0124910156640394 0.530980324718584 3.67463937185131 -0.668908573620865 P49792 RANBP2 P49792.S1456.p_RANBP2 P49792_S1456s _1_1_1456_1456 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21873.21873.5 16.87 11.43 4.72 5 1 1 0 744.9886 3640.9479 S1456s TMT10 1447 (K) SGSSFVHQAsFKFGQGDLPKPINSDFR (S) S(0.0)GS(0.0)S(0.0)FVHQAS(0.99)FKFGQGDLPKPINS(0.0)DFR K:TMT10,s:Phosphorylated S RANBP2 362585.9 2 26 9.1 1298.62 HUMAN 1 19.034 -2.7492 SSFYSTRSAPASQAS-p Q14980;S1840-p SSFYSTRSAPASQAS 0.175100795380215 0.904553276808623 0.367333333333333 0.0143333333333333 15.0768460047252 0.607459718352231 0.367333333333333 0.0143333333333333 0.0310681504452911 0.869468851573047 2.89287616975328 0.172275474417079 Q14980 NUMA1 Q14980.S1840.p_NUMA1 Q14980_S1840s _1_1_1840_1840 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4424.4424.2 14.07 14.07 11.554 3 1 1 0 534.248 987.5218 S1840s Hydrogen 1840 (R) sAPASQASLR (A) S(0.99)APAS(0.0)QAS(0.0)LR s:Phosphorylated S NUMA1 239339.3 2 25 31.1 900.97 HUMAN 1 15.0768 0.6075 SSGAADRSQEPSPVG-p Q96CP6;S263-p SSGAADRSQEPSPVG 0.640215550409713 0.55241036559434 0.0643333333333333 -0.056 3.61770154242841 3.47110772450955 0.0643333333333333 -0.056 0.43474024497071 0.44966514732618 0.843309101474071 -0.81445266193211 Q96CP6 GRAMD1A Q96CP6.S263.p_GRAMD1A Q96CP6_S263sS267s_2_2_263_267 Q96CP6 M0QZ12|Q96CP6|Q96CP6-3|Q96CP6-2 GRAM domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25540.25540.3 12.48 12.48 1.162 7 2 2 0 1097.1789 3129.5861 S263s S267s TMT10 244 (K) EVGDVIALSDITSSGAADRsQEPsPVGSR (R) EVGDVIALS(0.0)DIT(0.0)S(0.0)S(0.0)GAADRS(0.99)QEPS(0.99)PVGS(0.0)R s:Phosphorylated S GRAMD1A 81363.3 4 12 1250.1 161.94 HUMAN 1 3.6177 -3.4711 SSGARRPSLDSMENQ-p P07949;S696-p SSGARRPSLDSMENQ 0.56847874193114 0.0456974269541524 -0.077 -0.249 4.51260229808672 17.9290926836336 -0.077 -0.249 0.353785288961473 0.0161098216209008 -1.01393082766829 -3.44512279053783 P07949 RET P07949.S696.p_RET P07949_S696s _1_1_696_696 P07949 P07949|P07949-2 Proto-oncogene tyrosine-protein kinase receptor Ret HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21513.21513.4 15.8 15.8 1.351 3 1 1 0 616.0608 2381.2535 S696s TMT10 694 (R) RPsLDSMENQVSVDAFK (I) RPS(0.99)LDS(0.0)MENQVS(0.0)VDAFK K:TMT10,s:Phosphorylated S RET 126256.3 2 1 5183.1 22.08 HUMAN 1 -4.5126 -17.9291 SSGDEAESPSKMKRS-p Q15311;S99-p SSGDEAESPSKMKRS 0.96472530859038 0.0322547174440833 0.00733333333333333 -0.269666666666667 0.301874960052129 20.1252387687827 0.00733333333333333 -0.269666666666667 0.932851478071873 0.00971574534355466 0.0882507152983258 -3.90219898104932 Q15311 RALBP1 Q15311.S99.p_RALBP1 Q15311_S92sS93sS99s_3_3_92_99 Q15311 Q15311|A0A1W2PRI7 RalA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16013.16013.3 13.95 13.95 3.134 6 3 3 0 1020.4184 2819.3372 S92s S93s S99s TMT10 81 (K) RTEGYAAFQEDssGDEAEsPSK (M) RT(0.0)EGY(0.0)AAFQEDS(0.99)S(0.99)GDEAES(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S RALBP1 76461.4 2 13 822.1 218.43 HUMAN 1 0.3019 -20.1252 SSGEPPKSGDRSGYS-p P10636;S508-p SSGEPPKSGDRSGYS 0.223663787104468 0.504889968861376 0.454333333333333 -0.126333333333333 12.4967570660451 3.97712373390101 0.454333333333333 -0.126333333333333 0.0562761389660336 0.400209714798894 2.4207682198784 -0.91260034018901 P10636 MAPT P10636.S508.p_MAPT P10636_S508s _1_1_508_508 P10636 P10636|A0A0G2JPD5|A0A0G2JQJ7|P10636-8|P10636-7|P10636-5|P10636-6|P10636-4|P10636-2|I3L170|P10636-3 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5048.5048.3 10.42 7.71 1.764 4 1 1 0 650.6628 1870.0071 S508s TMT10 498 (K) TPPSSGEPPKsGDR (S) T(0.0)PPS(0.0)S(0.0)GEPPKS(0.99)GDR K:TMT10,s:Phosphorylated S MAPT 79154.4 2 10 119.1 551.6 HUMAN 1 12.4968 -3.9771 SSGEQSGSDTDTDSG-p O14503;S237-p SSGEQSGSDTDTDSG 0.253551933885431 0.0985793174091071 0.251666666666667 0.240666666666667 11.3544410452943 13.3000694509072 0.245330190485186 0.240666666666667 0.0732075538243404 0.0467727661484552 2.21832498334746 2.56383537534284 O14503 BHLHE40 O14503.S237.p_BHLHE40 O14503_S235sS237s_2_2_235_237 O14503 O14503 Class E basic helix-loop-helix protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14947.14947.5 16.95 16.95 2.511 11 2 2 0 961.025 4641.1527 S235s S237s TMT10 226 (R) TFAHSSGEQsGsDTDTDSGYGGESEKGDLRSEQPCFK (S) T(0.0)FAHS(0.0)S(0.0)GEQS(0.99)GS(0.99)DT(0.0)DT(0.0)DS(0.0)GY(0.0)GGES(0.0)EKGDLRS(0.0)EQPCFK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S BHLHE40 45965.7 1 3 3180.1 58.51 HUMAN 1 11.3544 13.3001 SSGFLNRSLKPLYKT-p A0A0C4DFQ0;S340-p SSGFLNRSLKPLYKT 0.582975772166803 0.216201144169681 -0.263666666666667 -0.340333333333333 4.31122782930715 8.75322650917968 -0.263666666666667 -0.340333333333333 0.370575938428955 0.133253108541886 -0.976172934142627 -1.76503013777349 A0A0C4DFQ0 PDE4DIP A0A0C4DFQ0.S340.p_PDE4DIP A0A0C4DFQ0_S340s _1_1_340_340 A0A0C4DFQ0 Q5VU43-2|A0A0C4DFQ0|E9PL24 Myomegalin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16230.16230.3 9.17 9.17 9.173 2 1 1 0 539.3317 1536.0128 S340s TMT10 340 (R) sLKPLYK (T) S(0.99)LKPLY(0.0)K K:TMT10,s:Phosphorylated S PDE4DIP 129884.6 3 3 2845.1 68.16 HUMAN 1 -4.3112 -8.7532 SSGGAGASDDEDSSE-p Q8N5D0;S662-p SSGGAGASDDEDSSE 0.227824784716705 0.159402616009271 0.243 0.195666666666667 12.3500731943231 10.4901059121541 0.243 0.195666666666667 0.0582093407309596 0.0893283698802015 2.39458619103817 2.06612023785066 Q8N5D0 WDTC1 Q8N5D0.S662.p_WDTC1 Q8N5D0_S662s _1_1_662_662 Q8N5D0 Q8N5D0 WD and tetratricopeptide repeats protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13958.13958.3 21.98 21.98 2.471 7 1 1 0 992.7598 2896.3064 S662s TMT10 651 (R) ITGLSSGGAGAsDDEDSSEGQVQCRPS (-) IT(0.0)GLS(0.0)S(0.0)GGAGAS(0.99)DDEDS(0.0)S(0.0)EGQVQCRPS(0.0) C:Carbamidomethylation,s:Phosphorylated S WDTC1 76945.3 1 3 3148.1 59.18 HUMAN 1 12.3501 10.4901 SSGGNFETPSKRAPA-p Q16625;T376-p SSGGNFETPSKRAPA 0.958739785397171 0.00189734390633451 -0.00766666666666667 -0.808666666666667 0.354583852893448 42.7264294465676 -0.00766666666666668 -0.808666666666667 0.921598193344709 5.33773557235894e-05 -0.10309815406848 -11.4283496644241 Q16625 OCLN Q16625.T376.p_OCLN Q16625_T376t _1_1_376_376 Q16625 Q16625|A0A0G2JMZ8|Q16625-3|Q16625-2 Occludin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11778.11778.2 16.15 11.5 2.008 5 1 1 0 906.433 1731.8954 T376t TMT10 368 (R) YSSGGNFEtPSK (R) Y(0.0)S(0.0)S(0.0)GGNFET(0.99)PS(0.0)K K:TMT10,t:Phosphorylated T OCLN 59542.1 2 6 840.1 214.78 HUMAN 1 -0.3546 -42.7264 SSGKGSKSPSPRPNM-p Q9H6S0;S1279-p SSGKGSKSPSPRPNM 0.291864377986462 0.0603424692389205 -0.315 0.243666666666667 10.0869090378986 16.24313310023 -0.315 0.243666666666667 0.0980187356477351 0.0237512619776816 -1.99681366241582 3.11277364212497 Q9H6S0 YTHDC2 Q9H6S0.S1279.p_YTHDC2 Q9H6S0_S1279s _1_1_1279_1279 Q9H6S0 Q9H6S0 Probable ATP-dependent RNA helicase YTHDC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7119.7119.3 9.16 3.39 2.481 2 1 1 0 516.2646 1466.8099 S1279s TMT10 1279 (K) sPSPRPNMPVR (Y) S(0.99)PS(0.0)PRPNMPVR s:Phosphorylated S YTHDC2 161671.9 2 15 668.1 249.65 HUMAN 1 -10.0869 16.2431 SSGKLKISPEQHWDF-p P45985-2;S101-p SSGKLKISPEQHWDF 0.110146686380279 0.0151114165651301 -0.351666666666667 -0.392666666666667 20.0436472767416 25.18820392966 -0.351666666666667 -0.392666666666667 0.00990000177186261 0.00302816549875444 -3.88832380906933 -5.08519218747017 P45985 MAP2K4 P45985.2.S101.p_MAP2K4 P45985-2_S101s _1_1_101_101 P45985-2 P45985-2 Isoform 2 of Dual specificity mitogen-activated protein kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24896.24896.4 18.87 18.87 6.807 2 1 1 0 706.8789 2744.5226 S101s TMT10 98 (K) LKIsPEQHWDFTAEDLK (D) LKIS(0.99)PEQHWDFT(0.0)AEDLK K:TMT10,s:Phosphorylated S MAP2K4 46096.9 1 2 2899.1 66.57 HUMAN 1 -20.0436 -25.1882 SSGKSVASDVPEELD-p Q14966;S1913-p SSGKSVASDVPEELD 0.27580570680811 0.113243247198721 0.156666666666667 0.182666666666667 10.5806074745739 12.4761452574547 0.156666666666667 0.182666666666667 0.0874861394390073 0.0565438628278435 2.08278755395122 2.41582343586568 Q14966 ZNF638 Q14966.S1913.p_ZNF638 Q14966_S1913s _1_1_1913_1913 Q14966 Q14966|Q14966-5 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35324.35324.3 19.08 15.68 3.083 2 1 1 0 761.7357 2203.2262 S1913s TMT10 1910 (K) SVAsDVPEELDFLVPK (A) S(0.0)VAS(0.99)DVPEELDFLVPK K:TMT10,s:Phosphorylated S ZNF638 222047.2 1 25 165.1 494.68 HUMAN 1 10.5806 12.4761 SSGKVTRSPSPVPQE-p Q8TF01;S311-p SSGKVTRSPSPVPQE 0.0591011739260369 0.697876726532471 -0.7245 0.0936666666666667 26.8646834997686 2.14779050735407 -0.7245 0.0936666666666666 0.00205840889547657 0.609847080766109 -5.53208152333768 0.541223549078826 Q8TF01 PNISR Q8TF01.S311.p_PNISR Q8TF01_S311sS313s_2_2_311_313 Q8TF01 Q8TF01|Q8TF01-2 Arginine/serine-rich protein PNISR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11802.11802.3 19 19 5.124 4 2 2 0 967.4206 2740.3024 S311s S313s TMT10 311 (R) sPsPVPQEEHSDPEMTEEEK (E) S(0.99)PS(0.99)PVPQEEHS(0.0)DPEMT(0.0)EEEK K:TMT10,s:Phosphorylated S PNISR 92575.2 4 11 613.1 261.5 HUMAN 2 -26.8647 2.1478 SSGLMSASPELGPAQ-p Q9NVE7;S393-p SSGLMSASPELGPAQ 0.140764808605189 0.833482249521423 -0.265333333333333 -0.0273333333333333 17.4121440774008 1.10853385414396 -0.265333333333333 -0.0273333333333333 0.0181461957830757 0.774723294480045 -3.34425617067419 -0.300855637857645 Q9NVE7 PANK4 Q9NVE7.S393.p_PANK4 Q9NVE7_S393s_1_1_393_393 Q9NVE7 Q9NVE7|A0A0G2JR38 Pantothenate kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22933.22933.3 24.32 24.32 1.121 7 1 1 0 1293.5737 3797.7299 N382n S393s TMT10 368 (K) GAEQDNPNQYSWGEnYAGSSGLMSAsPELGPAQR (A) GAEQDN(0.0)PN(0.0)QY(0.0)S(0.0)WGEN(0.99)Y(0.0)AGS(0.0)S(0.0)GLMS(0.0)AS(0.99)PELGPAQR n:Deamidated,s:Phosphorylated S PANK4 86674 5 1 4606.1 28.84 HUMAN 1 -17.4121 -1.1085 SSGMDPNSDDSSRNL-p Q5FBB7;S126-p SSGMDPNSDDSSRNL 0.515885052439712 0.123652029356351 0.0883333333333333 -0.170333333333333 5.30638013901056 11.9760659651014 0.0883333333333333 -0.170333333333333 0.294687684347664 0.0634444159113757 1.15991920853262 -2.32693176060178 Q5FBB7 SGOL1 Q5FBB7.S126.p_SGOL1 Q5FBB7_S126sS129s_2_2_126_129 Q5FBB7 Q5FBB7|Q5FBB7-6|Q5FBB7-2|Q5FBB7-3|Q5FBB7-4|Q5FBB7-5|Q5FBB7-7 Shugoshin 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20131.20131.4 16.19 13.75 1.161 8 2 2 0 1204.8208 4655.3284 N125n S126s S129s TMT10 101 (K) GKLTSQQTVEPAQNQEICSSGMDPnsDDsSRNLFVK (D) GKLT(0.0)S(0.0)QQT(0.0)VEPAQN(0.0)QEICS(0.0)S(0.0)GMDPN(0.99)S(0.99)DDS(0.99)S(0.0)RN(0.0)LFVK K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S SGO1 65044.6 4 21 1140.1 173.27 HUMAN 1 5.3064 -11.9761 SSGNLLGSPKIKKGL-p Q9H3C7;S450-p SSGNLLGSPKIKKGL 0.921583751108816 0.0932675207759657 0.016 -0.184333333333333 0.695501440015096 13.6264115957396 0.016 -0.184333333333333 0.852020130747989 0.0433869219373984 0.195651516518826 -2.62305643605052 Q9H3C7 GGNBP2 Q9H3C7.S450.p_GGNBP2 Q9H3C7_S450s _1_1_450_450 Q9H3C7 Q9H3C7|Q9H3C7-3 Gametogenetin-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22454.22454.4 28.39 26.43 1.67 10 1 1 0 1089.2438 4273.9722 S450s TMT10 417 (K) ACGSTEDGNTCVEVIVTNENTSCTCPSSGNLLGsPK (I) ACGS(0.0)T(0.0)EDGNT(0.0)CVEVIVT(0.0)NENT(0.0)S(0.0)CT(0.0)CPS(0.0)S(0.0)GNLLGS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GGNBP2 81367.2 5 2 3126.1 60.06 HUMAN 1 0.6955 -13.6264 SSGQEVATPPVPQLQ-p Q9UKV3;T682-p SSGQEVATPPVPQLQ 0.345348247711666 0.0138616790985751 0.157333333333333 0.386666666666667 8.58050352173348 25.798597845759 0.157333333333333 0.386666666666667 0.138659505749412 0.00263111733191565 1.73574530715685 5.24210545997269 Q9UKV3 ACIN1 Q9UKV3.T682.p_ACIN1 Q9UKV3_T682t _1_1_682_682 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20112.20112.4 18.83 18.83 5.076 10 1 1 0 1058.2802 4150.1105 T682t TMT10 663 (R) DSSTSYTETKDPSSGQEVAtPPVPQLQVCEPK (E) DS(0.0)S(0.0)T(0.0)S(0.0)Y(0.0)T(0.0)ET(0.0)KDPS(0.0)S(0.0)GQEVAT(0.99)PPVPQLQVCEPK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ACIN1 152258.2 3 24 32.2 899.18 HUMAN 1 8.5805 25.7986 SSGQGRRSPGKCDQE-p Q01850;S145-p SSGQGRRSPGKCDQE 0.417337150129418 0.00506471865308238 0.184 -0.904333333333333 7.00588023723787 33.4455065463192 0.184 -0.904333333333334 0.199256260843248 0.000452323701756827 1.46204247755382 -7.5391020144296 Q01850 CDR2 Q01850.S145.p_CDR2 Q01850_S145s _1_1_145_145 Q01850 Q01850 Cerebellar degeneration-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16627.16627.4 15.69 9.64 11.528 2 1 1 0 754.9015 2936.6144 S145s TMT10 145 (R) sPGKCDQEKPAPSFACLK (E) S(0.99)PGKCDQEKPAPS(0.0)FACLK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CDR2 52196.6 5 1 2019.1 102.12 HUMAN 1 7.0059 -33.4455 SSGQRSASPSVPGPT-p Q03164-3;S3530-p SSGQRSASPSVPGPT 0.852742978991457 0.518976584457085 -0.042 0.108666666666667 1.3404338035749 3.82708923077451 -0.042 0.108666666666667 0.734440503460601 0.414277242572895 -0.357219849530052 0.883784841516719 Q03164 KMT2A Q03164.3.S3530.p_KMT2A Q03164-3_S3530s _1_1_3530_3530 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10108.10108.3 17.23 17.23 1.56 4 1 1 0 825.4903 2394.489 S3530s TMT10 3528 (R) SAsPSVPGPTKPKPK (T) S(0.0)AS(0.99)PS(0.0)VPGPT(0.0)KPKPK K:TMT10,s:Phosphorylated S KMT2A 436608.3 9 45 26.1 936.8 HUMAN 1 -1.3404 3.8271 SSGRGGGTPDANSLA-p Q9BRQ0;T302-p SSGRGGGTPDANSLA 0.265419473261086 0.0657900421639967 0.164666666666667 0.224666666666667 10.9237688540242 15.7250319799248 0.164666666666667 0.224666666666667 0.0808394061667256 0.0267606588751469 2.14275955237114 3.01348568484511 Q9BRQ0 PYGO2 Q9BRQ0.T302.p_PYGO2 Q9BRQ0_T302t _1_1_302_302 Q9BRQ0 Q9BRQ0|Q5T171 Pygopus homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13756.13756.3 16.45 16.45 5.997 2 1 1 0 626.3245 1796.9907 T302t TMT10 299 (R) GGGtPDANSLAPPGK (A) GGGT(0.99)PDANS(0.0)LAPPGK K:TMT10,t:Phosphorylated T PYGO2 41643 8 5 2457.1 82.71 HUMAN 1 10.9238 15.725 SSGSEGSSPNWLQAL-p Q9C0C2;S1715-p SSGSEGSSPNWLQAL 0.224767265517543 0.00844515777214221 -0.199 -0.546 12.4539856497093 29.4380884332656 -0.199 -0.546 0.0568331117058419 0.00113812812781606 -2.41312763782953 -6.253297617835 Q9C0C2 TNKS1BP1 Q9C0C2.S1715.p_TNKS1BP1 Q9C0C2_S1715s _1_1_1715_1715 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26744.26744.2 16.41 14.56 1.124 5 1 1 0 1093.5462 2106.1232 S1715s TMT10 1708 (K) SSGSEGSsPNWLQALK (L) S(0.0)S(0.0)GS(0.0)EGS(0.0)S(0.99)PNWLQALK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 4 72 4.1 2105.7 HUMAN 1 -12.454 -29.4381 SSGSKPLSPGPCLDI-p Q8TEP8-3;S1755-p SSGSKPLSPGPCLDI 0.145835187369471 0.274900630907861 -0.498 0.126 17.0411855683118 7.39017156054081 -0.498 0.126 0.0197643002637801 0.182382365389035 -3.27075106017396 1.52870630789145 Q8TEP8 NotFound Q8TEP8.3.S1755.p_NotFound Q8TEP8-3_S1755s _1_1_1755_1755 Q8TEP8-3 Q8TEP8-3|A0A0A0MR42|Q8TEP8-2|C9JT09 Isoform 3 of Centrosomal protein of 192 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.29599.29599.4 20.54 20.54 4.862 6 1 1 0 855.7175 3339.8801 S1755s TMT10 1744 (K) GEVISSGSKPLsPGPCLDIPSILSNK (Q) GEVIS(0.0)S(0.0)GS(0.0)KPLS(0.99)PGPCLDIPS(0.0)ILS(0.0)NK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CEP192 281787.5 5 15 491.1 293.99 HUMAN 1 -17.0412 7.3902 SSGSRSHSPLRSKQR-p Q9UKV3;S605-p SSGSRSHSPLRSKQR 0.386906109244301 0.473305021871554 0.320666666666667 -0.466666666666667 7.63258378197425 4.3312637447425 0.320666666666667 -0.466666666666667 0.172481143118662 0.368870246143768 1.57135093461558 -0.979768425857276 Q9UKV3 ACIN1 Q9UKV3.S605.p_ACIN1 Q9UKV3_S605s _1_1_605_605 Q9UKV3 Q9UKV3 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.4088.4088.3 10.15 10.15 2.148 3 1 1 0 483.9366 1369.8316 S605s TMT10 603 (R) SHsPLRSK (Q) S(0.0)HS(0.99)PLRS(0.0)K K:TMT10,s:Phosphorylated S ACIN1 152258.2 1 18 32.2 899.18 HUMAN 1 7.6326 -4.3313 SSGSRSSSLKSAQGT-p Q9C0B5;S429-p SSGSRSSSLKSAQGT 0.61960896183161 0.579653169230169 0.0776666666666667 -0.056 3.86429187066152 3.19610106910982 0.0776666666666667 -0.056 0.410743607312724 0.479059981178656 0.891098370890958 -0.759858091712743 Q9C0B5 ZDHHC5 Q9C0B5.S429.p_ZDHHC5 Q9C0B5_S429sS432s_2_2_429_432 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24614.24614.2 9.75 9.75 1.22 6 2 2 0 1406.7025 2652.4721 S429s S432s TMT10 427 (R) SSsLKsAQGTGFELGQLQSIR (S) S(0.0)S(0.0)S(0.99)LKS(0.99)AQGT(0.0)GFELGQLQS(0.0)IR K:TMT10,s:Phosphorylated S ZDHHC5 78285 5 28 134.1 530.74 HUMAN 1 3.8643 -3.1961 SSGSSEDSFVEIRMA-p Q96CV9;S177-p SSGSSEDSFVEIRMA 0.428187738364171 0.196904205788193 -0.109333333333333 -0.137333333333333 6.78157891703443 9.28480275690791 -0.109333333333333 -0.137333333333333 0.209817693366198 0.117901606928316 -1.42272294165533 -1.85698422188841 Q96CV9 OPTN Q96CV9.S177.p_OPTN Q96CV9_S177s _1_1_177_177 Q96CV9 Q96CV9|Q96CV9-2|Q96CV9-3 Optineurin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18694.18694.2 18.39 13.3 1.421 5 1 1 0 968.4485 1855.9235 S177s TMT10 168 (K) LNSSGSSEDsFVEIR (M) LNS(0.0)S(0.0)GS(0.0)S(0.0)EDS(0.99)FVEIR s:Phosphorylated S OPTN 66319.4 2 4 2419.1 84.3 HUMAN 1 -6.7816 -9.2848 SSGTIPGTPGPNGED-p A0A087X127;T583-p SSGTIPGTPGPNGED 0.154517515230214 0.474480174367929 0.302333333333333 0.0836666666666667 16.2975736995419 4.31724866124713 0.302333333333333 0.0836666666666667 0.0234553884637075 0.370062547248298 3.12553807152892 0.977131398579308 A0A087X127 NotFound A0A087X127.T583.p_NotFound A0A087X127_T583t _1_1_583_583 A0A087X127 A0A087X127|Q8NF64|Q8NF64-2|E7EWM3|Q8NF64-3 Zinc finger MIZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19933.19933.3 15.7 16.31 4.371 5 1 1 0 1004.4993 2931.51 T583t TMT10 574 (R) NFSSGTIPGtPGPNGEDGVEQTAIK (V) NFS(0.0)S(0.0)GT(0.0)IPGT(0.99)PGPNGEDGVEQT(0.0)AIK K:TMT10,t:Phosphorylated T ZMIZ2 97653.3 1 3 4436.1 31.43 HUMAN 1 16.2976 4.3172 SSGTSDASPSGSPVL-p Q53HC0;S179-p SSGTSDASPSGSPVL 0.864679832642579 0.0474557203885791 0.0273333333333333 0.287666666666667 1.22827333437735 17.7065519464368 0.0273333333333333 0.287666666666667 0.753655141975287 0.0169568354337604 0.330197330290144 3.40039189190432 Q53HC0 CCDC92 Q53HC0.S179.p_CCDC92 Q53HC0_S179s _1_1_179_179 Q53HC0 Q53HC0|Q53HC0-2 Coiled-coil domain-containing protein 92 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21395.21395.4 21.1 21.1 1.13 10 1 1 0 847.4401 3306.7859 S179s TMT10 169 (K) LMSSSGTSDAsPSGSPVLASYKPAPPK (D) LMS(0.0)S(0.0)S(0.0)GT(0.0)S(0.0)DAS(0.99)PS(0.0)GS(0.0)PVLAS(0.0)Y(0.0)KPAPPK K:TMT10,s:Phosphorylated S CCDC92 37074.5 1 1 3168.1 58.81 HUMAN 1 1.2283 17.7066 SSGTSLLTPKSSSST-p Q9NXV6;T346-p SSGTSLLTPKSSSST 0.601379056634462 0.0789638563832102 -0.0736666666666667 -0.197666666666667 4.07904982377364 14.6331918786583 -0.0736666666666667 -0.197666666666667 0.390926415726679 0.0344096941274541 -0.932210194770435 -2.80815718544992 Q9NXV6 CDKN2AIP Q9NXV6.T346.p_CDKN2AIP Q9NXV6_T346t _1_1_346_346 Q9NXV6 Q9NXV6 CDKN2A-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13696.13696.2 12.73 8.68 3.295 7 1 1 0 908.9774 1736.9795 T346t TMT10 336 (K) NSSSSGTSLLtPK (S) NS(0.0)S(0.0)S(0.0)S(0.0)GT(0.0)S(0.0)LLT(0.99)PK K:TMT10,t:Phosphorylated T CDKN2AIP 61580.3 1 6 1573.1 130.52 HUMAN 1 -4.079 -14.6332 SSGVRAPSPAPSSVP-p O75179;S2401-p SSGVRAPSPAPSSVP 0.893977543443334 0.182613772206988 -0.0283333333333333 -0.299 0.950504862797301 9.71433123477797 -0.0283333333333333 -0.299 0.803432718542655 0.106798923834733 -0.261416594059815 -1.93136395356587 O75179 ANKRD17 O75179.S2401.p_ANKRD17 O75179_S2401s _1_1_2401_2401 O75179 O75179|O75179-2|O75179-7|O75179-6|O75179-4 Ankyrin repeat domain-containing protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11591.11591.3 20.01 14.39 8.508 6 1 1 0 872.7671 2536.3205 S2401s Hydrogen 2399 (R) APsPAPSSVPLGSEKPSNVSQDR (K) APS(0.99)PAPS(0.0)S(0.0)VPLGS(0.0)EKPS(0.0)NVS(0.0)QDR K:TMT10-Lys-Only,s:Phosphorylated S ANKRD17 276135.9 5 14 287.2 383.69 HUMAN 1 -0.9505 -9.7143 SSGVVPQSAPPVPTA-p P41162;S139-p SSGVVPQSAPPVPTA 0.279270057127608 0.0030462900255454 -0.233333333333333 -0.727 10.4737332248925 37.806888613611 -0.233333333333333 -0.727 0.0896657690078488 0.000165695662049517 -2.06414792300857 -9.18736454896572 P41162 ETV3 P41162.S139.p_ETV3 P41162_S139s _1_1_139_139 P41162 P41162 ETS translocation variant 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13550.13550.2 15.24 11.07 3.913 6 1 1 0 1017.0183 1953.0603 S139s TMT10 132 (R) SSGVVPQsAPPVPTASSR (F) S(0.0)S(0.0)GVVPQS(0.99)APPVPT(0.0)AS(0.0)S(0.0)R s:Phosphorylated S ETV3 57285.5 1 2 2187.1 94.05 HUMAN 1 -10.4737 -37.8069 SSHRFRRSRSPMHYM-p Q14966;S508-p SSHRFRRSRSPMHYM 0.214459963931144 0.898912157702689 0.617333333333333 0.0126666666666667 12.8887043276874 0.648376665637174 0.617333333333334 0.0126666666666667 0.0514197034025987 0.861315640224176 2.49103124858649 0.183174968952488 Q14966 ZNF638 Q14966.S508.p_ZNF638 Q14966_S508sS510s_2_2_508_510 Q14966 Q14966|Q14966-3|Q14966-4|A0A096LPH6|Q14966-2 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6925.6925.4 10.72 10.72 10.72 4 2 2 0 435.9298 1580.7573 S508s S510s Hydrogen 508 (R) sRsPMHYMYRPR (S) S(0.99)RS(0.99)PMHY(0.0)MY(0.0)RPR s:Phosphorylated S ZNF638 222047.2 3 27 165.1 494.68 HUMAN 1 12.8887 0.6484 SSHRSQPSSGDEDSD-p Q9UKJ3;S814-p SSHRSQPSSGDEDSD 0.621295713198345 0.696484843776687 0.099 0.126666666666667 3.84345279392098 2.15894358718954 0.099 0.126666666666667 0.412719245199726 0.608282946918205 0.887084672261126 0.543655441811802 Q9UKJ3 GPATCH8 Q9UKJ3.S814.p_GPATCH8 Q9UKJ3_S814sS815sS820s_3_3_814_820 Q9UKJ3 Q9UKJ3|Q9UKJ3-2 G patch domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3037.3037.3 10.85 10.85 3.546 6 3 3 0 749.2564 2005.8533 S814s S815s S820s TMT10 811 (R) SQPssGDEDsDDASSHR (L) S(0.0)QPS(0.99)S(0.99)GDEDS(0.99)DDAS(0.0)S(0.0)HR s:Phosphorylated S GPATCH8 165107.3 1 22 231.1 422.52 HUMAN 1 3.8435 2.1589 SSHSRERSAEKTEKT-p Q9Y2W1;S753-p SSHSRERSAEKTEKT 0.36859263142928 0.0192120044489922 0.18 0.383333333333333 8.03604149640336 23.5854099095969 0.18 0.383333333333333 0.157179480978997 0.00437984769951223 1.64141228913784 4.68877230224497 Q9Y2W1 THRAP3 Q9Y2W1.S753.p_THRAP3 Q9Y2W1_S753s _1_1_753_753 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3672.3672.3 10.7 10.7 4.792 2 1 1 0 539.2872 1535.8793 S753s Hydrogen 751 (R) ERsAEKTEK (T) ERS(0.99)AEKT(0.0)EK K:TMT10-Lys-Only,s:Phosphorylated S THRAP3 108720.9 3 83 10.2 1293.04 HUMAN 1 8.036 23.5854 SSHSSPGSPKKQKNE-p Q6NZY4;S427-p SSHSSPGSPKKQKNE 0.0474287332201862 0.00913235442722966 0.488 0.525 29.4132039657859 28.8460566009854 0.488 0.525 0.00114466816193858 0.00130435059279422 6.25555734848791 6.07942160965236 Q6NZY4 ZCCHC8 Q6NZY4.S427.p_ZCCHC8 Q6NZY4_S427s _1_1_427_427 Q6NZY4 Q6NZY4|Q6NZY4-2 Zinc finger CCHC domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3302.3302.3 16.19 16.19 2.814 6 1 1 0 532.5994 1515.8167 S427s TMT10 419 (R) SSSHSSPGsPK (K) S(0.0)S(0.0)S(0.0)HS(0.0)S(0.0)PGS(0.99)PK K:TMT10,s:Phosphorylated S ZCCHC8 79203.5 5 4 443.1 311.3 HUMAN 1 29.4132 28.8461 SSIDRELSPEGPGKE-p A0A0G2JPP5;S1232-p SSIDRELSPEGPGKE 0.271908041557881 0.0584500242169918 0.233666666666667 -0.236666666666667 10.7136634216536 16.4253597859608 0.233666666666667 -0.236666666666667 0.084846446445802 0.0227752955488657 2.10601788071022 -3.14799781459787 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1232.p_SCRIB A0A0G2JPP5_S1232s _1_1_1232_1232 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20906.20906.4 16.58 16.58 3.12 5 1 1 0 664.0922 2573.3823 S1232s TMT10 1219 (R) NSLESISSIDRELsPEGPGK (E) NS(0.0)LES(0.0)IS(0.0)S(0.0)IDRELS(0.99)PEGPGK K:TMT10,s:Phosphorylated S SCRIB 178690.9 3 26 22.1 1004.81 HUMAN 1 10.7137 -16.4254 SSIENSDSPVRSILK-p O95425-2;S494-p SSIENSDSPVRSILK 0.219634467679689 0.0571271228422201 -0.189 -0.444333333333333 12.6772093696977 16.5653260570168 -0.189 -0.444333333333333 0.0539857405302805 0.0220529856208928 -2.45306120613033 -3.17516307366166 O95425 SVIL O95425.2.S494.p_SVIL O95425-2_S494s _1_1_494_494 O95425-2 O95425|O95425-3|O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12931.12931.2 16.04 12.26 1.108 5 1 1 0 867.4008 1653.8281 S494s TMT10 485 (K) FSSSIENSDsPVR (S) FS(0.0)S(0.0)S(0.0)IENS(0.0)DS(0.99)PVR s:Phosphorylated S SVIL 202384.1 1 15 406.2 324.74 HUMAN 1 -12.6772 -16.5653 SSIENSESDSSEAKE-p Q5UIP0;S1554-p SSIENSESDSSEAKE 0.572301168829667 0.150416654230421 0.091 -0.16 4.46510810051786 10.8229939731229 0.091 -0.16 0.357675497541937 0.0827371587192202 1.0050551423324 -2.1241874774498 Q5UIP0 RIF1 Q5UIP0.S1554.p_RIF1 Q5UIP0_S1554s _1_1_1554_1554 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16520.16520.3 22.04 22.04 2.529 7 1 1 0 911.783 2653.3681 S1554s TMT10 1540 (R) RASQGLLSSIENSEsDSSEAK (E) RAS(0.0)QGLLS(0.0)S(0.0)IENS(0.0)ES(0.99)DS(0.0)S(0.0)EAK K:TMT10,s:Phosphorylated S RIF1 276628.8 14 18 29.1 922.06 HUMAN 1 4.4651 -10.823 SSIKRGLSVDSAQEV-p Q9Y4A5;S2051-p SSIKRGLSVDSAQEV 0.391178814803887 0.630308437349205 -0.171666666666667 0.062 7.52509993821592 2.72468800118348 -0.171666666666667 0.062 0.176803153198827 0.53398763407207 -1.55265160190345 0.663827865091238 Q9Y4A5 TRRAP Q9Y4A5.S2051.p_TRRAP Q9Y4A5_S2051s _1_1_2051_2051 Q9Y4A5 Q9Y4A5|F2Z2U4|Q9Y4A5-2 Transformation/transcription domain-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11610.11610.3 10.6 10.6 10.605 2 1 1 0 609.6647 1747.0114 S2051s TMT10 2049 (R) GLsVDSAQEVKR (F) GLS(0.99)VDS(0.0)AQEVKR K:TMT10,s:Phosphorylated S TRRAP 442042.7 3 3 1141.1 173.21 HUMAN 1 -7.5251 2.7247 SSIPAQISPEGRAAM-p Q9Y490;S1589-p SSIPAQISPEGRAAM 0.474137537478546 0.0654881186106886 0.112666666666667 0.305666666666667 5.96828201757116 15.752568785389 0.112666666666667 0.305666666666667 0.253029873425531 0.0265915174699109 1.27891121073721 3.01873149528454 Q9Y490 TLN1 Q9Y490.S1589.p_TLN1 Q9Y490_S1589s _1_1_1589_1589 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.37104.37104.4 25.94 23.1 1.439 6 1 1 0 945.7235 3699.9067 S1589s TMT10 1560 (R) AATAPLLEAVDNLSAFASNPEFSSIPAQIsPEGR (A) AAT(0.0)APLLEAVDNLS(0.0)AFAS(0.0)NPEFS(0.0)S(0.0)IPAQIS(0.99)PEGR s:Phosphorylated S TLN1 271930.4 3 22 267.1 395.2 HUMAN 1 5.9683 15.7526 SSISGPLSPAYTGQV-p Q01082-3;S14-p SSISGPLSPAYTGQV 0.248295328267954 0.11841941774684 -0.209 -0.163333333333333 11.559743733991 12.2166615168005 -0.209 -0.163333333333333 0.0698273606191935 0.0600252321411903 -2.25447983922757 -2.36961672948688 Q01082 SPTBN1 Q01082.3.S14.p_SPTBN1 Q01082-3_S14s _1_1_14_14 Q01082-3 Q01082-3 Isoform 2 of Spectrin beta chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24151.24151.3 23.36 23.36 1.21 9 1 1 0 1036.8364 3028.5213 S14s TMT10 6 (R) TSSISGPLsPAYTGQVPYNYNQLEGR (F) T(0.0)S(0.0)S(0.0)IS(0.0)GPLS(0.99)PAY(0.0)T(0.0)GQVPY(0.0)NY(0.0)NQLEGR s:Phosphorylated S SPTBN1 252077.6 2 27 233.2 420.49 HUMAN 1 -11.5597 -12.2167 SSIVFEDSGCDNASS-p Q9NZJ5;S811-p SSIVFEDSGCDNASS 0.415161918072873 0.925356262837683 0.127333333333333 -0.00966666666666664 7.04384117292005 0.475930205495923 0.127333333333333 -0.00966666666666664 0.197522185714465 0.896204209445194 1.46868521684699 -0.136695005089034 Q9NZJ5 EIF2AK3 Q9NZJ5.S811.p_EIF2AK3 Q9NZJ5_S811s _1_1_811_811 Q9NZJ5 Q9NZJ5|E7ER02 Eukaryotic translation initiation factor 2-alpha kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15454.15454.4 18.77 18.77 5.481 7 1 1 0 786.1288 3061.5239 S811s TMT10 802 (R) TSSSIVFEDsGCDNASSKEEPK (T) T(0.0)S(0.0)S(0.0)S(0.0)IVFEDS(0.99)GCDNAS(0.0)S(0.0)KEEPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EIF2AK3 126241 4 5 1191.1 168.13 HUMAN 1 7.0438 -0.4759 SSIVKVPSGIFDVNS-p Q5VZ89-7;S1038-p SSIVKVPSGIFDVNS 0.207348309752727 0.158882149624186 -0.347666666666667 0.192333333333333 13.2030666423063 10.5106200147862 -0.347666666666667 0.192333333333333 0.0478292241105103 0.0889074181294909 -2.54772365123074 2.06969372880902 Q5VZ89 DENND4C Q5VZ89.7.S1038.p_DENND4C Q5VZ89-7_S1038s _1_1_1038_1038 Q5VZ89-7 Q5VZ89-7|Q5VZ89-3|Q5VZ89-5 Isoform 2 of DENN domain-containing protein 4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24088.24088.3 12.12 12.12 8.004 2 1 1 0 500.5866 1419.7793 S1038s TMT10 1036 (K) VPsGIFDVNSR (K) VPS(0.99)GIFDVNS(0.0)R s:Phosphorylated S DENND4C 220154.2 6 5 116.1 565.52 HUMAN 1 -13.2031 10.5106 SSIWEVDSLHAKTRT-p A0A1B0GUA8;S1010-p SSIWEVDSLHAKTRT 0.602404748704003 0.618638460956171 -0.097 -0.056 4.06359437170442 2.83474674626009 -0.097 -0.056 0.392320103277561 0.520625367574834 -0.92926636088856 -0.686549516310972 A0A1B0GUA8 NotFound A0A1B0GUA8.S1010.p_NotFound A0A1B0GUA8_S1010s _1_1_1010_1010 A0A1B0GUA8 A0A1B0GUA8|Q9H1H9|Q9H1H9-2|Q9H1H9-4|Q9H1H9-3 Kinesin-like protein KIF13A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18666.18666.4 13.32 13.32 1.345 3 1 1 0 593.038 2289.1698 S1010s TMT10 998 (R) CAGNGSSIWEVDsLHAK (T) CAGNGS(0.0)S(0.0)IWEVDS(0.99)LHAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIF13A 208874.1 1 4 1079.1 180.11 HUMAN 1 -4.0636 -2.8347 SSIYGSFSDDDSILK-p J3KN66;S317-p SSIYGSFSDDDSILK 0.181336554886184 0.0543386013644106 -0.340666666666667 -0.407333333333333 14.6133059123418 16.8615653953504 -0.340666666666667 -0.407333333333333 0.0345676143975112 0.0205988730212833 -2.80623609315018 -3.23297995589548 J3KN66 TOR1AIP1 J3KN66.S317.p_TOR1AIP1 J3KN66_S317s _1_1_317_317 J3KN66 J3KN66 Torsin-1A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25369.25369.3 15.07 12.24 1.56 6 1 1 0 724.6884 2092.085 S317s TMT10 310 (K) SSIYGSFsDDDSILK (S) S(0.0)S(0.0)IY(0.0)GS(0.0)FS(0.99)DDDS(0.0)ILK K:TMT10,s:Phosphorylated S TOR1AIP1 67992 1 1 585.2 265.22 HUMAN 1 -14.6133 -16.8616 SSKADEASELACPTP-p P49327;S2198-p SSKADEASELACPTP 0.370901171336834 0.0218796252967929 0.132333333333333 -0.329 7.98689410577715 22.6859424799688 0.132333333333333 -0.329 0.158968321775431 0.00538772911403401 1.63288699587275 -4.47565015507926 P49327 FASN P49327.S2198.p_FASN P49327_S2198s _1_1_2198_2198 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22575.22575.5 24.8 19.93 5.206 5 1 1 0 908.0712 4456.3597 S2198s TMT10 2187 (K) LQELSSKADEAsELACPTPKEDGLAQQQTQLNLR (S) LQELS(0.0)S(0.0)KADEAS(0.99)ELACPT(0.0)PKEDGLAQQQT(0.0)QLNLR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S FASN 276046.1 1 24 175.1 481.87 HUMAN 1 7.9869 -22.6859 SSKASLGSLEGEAEA-p Q09666;S5752-p SSKASLGSLEGEAEA 0.237929994112176 0.0136487581609731 0.189666666666667 0.396 11.9383937370729 25.9146601686216 0.189666666666667 0.396 0.0639971488823695 0.00256173370951719 2.32141210965511 5.27232843809102 Q09666 AHNAK Q09666.S5752.p_AHNAK Q09666_S5752s _1_1_5752_5752 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22582.22582.2 20.95 15.85 3.858 4 1 1 0 1136.0607 2191.1494 S5752s TMT10 5748 (K) ASLGsLEGEAEAEASSPK (G) AS(0.0)LGS(0.99)LEGEAEAEAS(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S AHNAK 629603.7 22 158 1.1 4313.36 HUMAN 1 11.9384 25.9147 SSKCSTVSPVSGINT-p Q8N0Z3;S800-p SSKCSTVSPVSGINT 0.449967305790725 0.0147104912964376 0.192333333333333 -0.358333333333333 6.40715484529288 25.3742181131379 0.192333333333333 -0.358333333333333 0.228709663791349 0.00290120347304581 1.35678519924038 -5.13265184384025 Q8N0Z3 SPICE1 Q8N0Z3.S800.p_SPICE1 Q8N0Z3_S800s _1_1_800_800 Q8N0Z3 Q8N0Z3 Spindle and centriole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10955.10955.3 7.69 7.69 7.692 5 1 1 0 562.9419 1606.842 S800s TMT10 796 (K) CSTVsPVSGINTR (R) CS(0.0)T(0.0)VS(0.99)PVS(0.0)GINT(0.0)R C:Carbamidomethylation,s:Phosphorylated S SPICE1 96605.1 1 12 556.1 273.19 HUMAN 1 6.4072 -25.3742 SSKDNRGTQDALNPE-p O43306;T614-p SSKDNRGTQDALNPE 0.812937085947395 0.0285536998641696 0.0356666666666667 0.378666666666667 1.72972467835226 20.9183092098225 0.0356666666666667 0.378666666666667 0.671471419609512 0.0080941095676876 0.448079370877309 4.07482162205728 O43306 ADCY6 O43306.T614.p_ADCY6 O43306_T614t _1_1_614_614 O43306 O43306|O43306-2 Adenylate cyclase type 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26477.26477.3 12.26 12.26 11.959 2 1 1 0 910.4103 2649.259 T614t TMT10 610 (K) DNRGtQDALNPEDEVDEFLSR (A) DNRGT(0.99)QDALNPEDEVDEFLS(0.0)R t:Phosphorylated T ADCY6 132381.8 1 5 1769.1 116.16 HUMAN 1 1.7297 20.9183 SSKERHRSPLEKPHN-p Q96K37;S363-p SSKERHRSPLEKPHN 0.145152146047681 0.0150452882196435 -0.822333333333333 -0.474333333333333 17.0818579661036 25.2128040849166 -0.822333333333333 -0.474333333333333 0.0195800683449041 0.0030110612613203 -3.27877485588922 -5.09145081311522 Q96K37 SLC35E1 Q96K37.S363.p_SLC35E1 Q96K37_S363s _1_1_363_363 Q96K37 Q96K37|Q96K37-2 Solute carrier family 35 member E1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3916.3916.3 8.64 8.64 99 1 1 1 0 468.9305 1324.8101 S363s TMT10 361 (R) HRsPLEK (P) HRS(1.0)PLEK K:TMT10,s:Phosphorylated S SLC35E1 45114 2 1 6148.1 13.61 HUMAN 1 -17.0819 -25.2128 SSKEVKKSVEPSEVK-p Q96IZ7;S254-p SSKEVKKSVEPSEVK 0.123250585962086 0.00539093833915308 -0.275666666666667 -0.591666666666667 18.9370729166876 32.9285419874234 -0.275666666666667 -0.591666666666667 0.0127729940047498 0.000509501892222591 -3.6544566162345 -7.36185647225888 Q96IZ7 RSRC1 Q96IZ7.S254.p_RSRC1 Q96IZ7_S254s _1_1_254_254 Q96IZ7 Q96IZ7|Q96IZ7-2 Serine/Arginine-related protein 53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11306.11306.4 8.75 8.75 1.319 2 1 1 0 589.5981 2275.4043 S254s TMT10 250 (K) EVKKsVEPSEVK (Q) EVKKS(0.99)VEPS(0.0)EVK K:TMT10,s:Phosphorylated S RSRC1 38676.4 1 7 2282.1 89.79 HUMAN 1 -18.9371 -32.9285 SSKIEEPSPIVYSLP-p Q8WYP5-2;S1122-p SSKIEEPSPIVYSLP 0.398067370861107 0.825657726325012 0.163666666666667 0.0496666666666667 7.38297198193746 1.16398681901487 0.163666666666667 0.0496666666666667 0.182684963100331 0.764894112483176 1.52789780311045 0.314489924441776 Q8WYP5 AHCTF1 Q8WYP5.2.S1122.p_AHCTF1 Q8WYP5-2_S1122s _1_1_1122_1122 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.37490.37490.4 13.93 10.96 2.26 5 1 1 0 867.4601 3386.854 S1122s TMT10 1118 (K) IEEPsPIVYSLPAPELPEAFFGTPISK (A) IEEPS(0.99)PIVY(0.0)S(0.0)LPAPELPEAFFGT(0.0)PIS(0.0)K K:TMT10,s:Phosphorylated S AHCTF1 258049.6 1 5 40.1 829.79 HUMAN 1 7.383 1.164 SSKKDLKSAVLSEKA-p Q9UHF7-2;S90-p SSKKDLKSAVLSEKA 0.284014355529514 0.127639986251278 -0.179 0.161333333333333 10.3136453784781 11.7856916395938 -0.179 0.161333333333333 0.0930326650602668 0.0662873772703691 -2.036257964939 2.293258696776 Q9UHF7 TRPS1 Q9UHF7.2.S90.p_TRPS1 Q9UHF7-2_S90s _1_1_90_90 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12320.12320.2 9.02 9.02 9.021 2 1 1 0 636.3535 1191.7349 S90s TMT10 90 (K) sAVLSEK (A) S(0.99)AVLS(0.0)EK K:TMT10,s:Phosphorylated S TRPS1 145246 1 2 14.1 1150.14 HUMAN 1 -10.3136 11.7857 SSKKESESEDSSDDE-p P35659;S303-p SSKKESESEDSSDDE 0.954566881730103 0.0125994963231798 0.00999999999999999 0.421 0.396713275824407 26.4893874427193 0.00999999999999999 0.421 0.912701306940509 0.00224419843785465 0.114855453250275 5.42385405413202 P35659 DEK P35659.S303.p_DEK P35659_S303sS306sS307s_3_3_303_307 P35659 P35659 Protein DEK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15185.15185.4 7.51 7.51 1.18 6 3 3 0 906.4202 3382.7632 S303s S306s S307s TMT10 293 (K) NQNSSKKESEsEDssDDEPLIK (K) NQNS(0.0)S(0.0)KKES(0.0)ES(0.99)EDS(0.99)S(0.99)DDEPLIK K:TMT10,s:Phosphorylated S DEK 42958.8 4 13 488.1 294.94 HUMAN 1 0.3967 26.4894 SSKKKEASLQFVVEP-p Q03188;S96-p SSKKKEASLQFVVEP 0.253185624491412 0.0549075865221613 0.211 0.316 11.3756802067841 16.7993072786052 0.211 0.316 0.0728504064793705 0.0208962941060365 2.22206113421677 3.22079239912876 Q03188 CENPC Q03188.S96.p_CENPC Q03188_S96s _1_1_96_96 Q03188 Q03188 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21403.21403.3 8.79 8.79 8.788 3 1 1 0 696.0071 2006.0392 S96s TMT10 94 (K) EAsLQFVVEPSEATNR (S) EAS(0.99)LQFVVEPS(0.0)EAT(0.0)NR s:Phosphorylated S CENPC 107459.5 1 5 209.1 442.77 HUMAN 1 11.3757 16.7993 SSKKKPPSPRPGSPR-p A4D1S0;S72-p SSKKKPPSPRPGSPR 0.434086448335294 0.430332478656134 0.114666666666667 -0.101 6.67922268549709 4.87777308738735 0.114666666666667 -0.101 0.214821493427582 0.32525403370622 1.40473754297972 -1.08139700603573 A4D1S0 KLRG2 A4D1S0.S72.p_KLRG2 A4D1S0_S72s _1_1_72_72 A4D1S0 A4D1S0|A4D1S0-2 Killer cell lectin-like receptor subfamily G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.4329.4329.5 10.04 10.04 2.543 2 1 1 0 415.0486 1991.2481 S72s TMT10 68 (K) KKPPsPRPGSPR (V) KKPPS(0.99)PRPGS(0.0)PR K:TMT10,s:Phosphorylated S KLRG2 43534.4 4 4 945.1 197.69 HUMAN 1 6.6792 -4.8778 SSKLKSPSQKQDGGT-p Q96T37;S767-p SSKLKSPSQKQDGGT 0.660198012756113 0.0332986058440988 -0.0623333333333333 0.272333333333333 3.37751223652324 19.9184508072711 -0.0623333333333334 0.272333333333333 0.459461129995371 0.0101895479949918 -0.796099527730317 3.85787965083831 Q96T37 RBM15 Q96T37.S767.p_RBM15 Q96T37_S767s _1_1_767_767 Q96T37 Q96T37 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9482.9482.3 12.27 12.27 1.199 5 1 1 0 860.791 2500.3974 S767s TMT10 765 (K) SPsQKQDGGTAPVASASPK (L) S(0.0)PS(0.99)QKQDGGT(0.0)APVAS(0.0)AS(0.0)PK K:TMT10,s:Phosphorylated S RBM15 107414.9 1 28 55.1 724.11 HUMAN 1 -3.3775 19.9185 SSKMHGMSFDVKSSP-p R4GMW8;S772-p SSKMHGMSFDVKSSP 0.445065812877998 0.516107771774227 0.155 -0.0783333333333333 6.47968160356165 3.85645129579116 0.155 -0.0783333333333333 0.224921949792081 0.411485816790156 1.3695901540529 -0.889442037248475 R4GMW8 NotFound R4GMW8.S772.p_NotFound R4GMW8_S772s _1_1_772_772 R4GMW8 R4GMW8|A0A1W2PS85|P28715 BIVM-ERCC5 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17550.17550.3 8.08 8.08 99 1 1 1 0 530.5946 1509.7958 S772s TMT10 768 (K) MHGMsFDVK (S) MHGMS(1.0)FDVK K:TMT10,s:Phosphorylated S BIVM-ERCC5 185876.1 1 3 561.1 271.77 HUMAN 1 6.4797 -3.8565 SSKMPAGSPTKAKED-p E9PAP7;S252-p SSKMPAGSPTKAKED 0.871201262496943 0.00178284028886761 -0.028 -0.915333333333333 1.1719243109007 43.344386679624 -0.028 -0.915333333333333 0.763497411345211 4.62979042096379e-05 -0.316464720939753 -11.74295334349 E9PAP7 ZDHHC23 E9PAP7.S252.p_ZDHHC23 E9PAP7_S252s _1_1_252_252 E9PAP7 E9PAP7|Q8IYP9|B3KXV3 Palmitoyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10049.10049.2 11.14 6.3 1.461 2 1 1 0 663.8483 1246.723 S252s TMT10 248 (K) MPAGsPTK (A) MPAGS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S ZDHHC23 47615.8 4 1 6529.1 11.14 HUMAN 1 -1.1719 -43.3444 SSKNPARSPVTEIRT-p Q86YC2;S190-p SSKNPARSPVTEIRT 0.185733929925727 0.00298393706599723 -0.21 -0.765666666666667 14.367621628326 37.9492342560175 -0.21 -0.765666666666667 0.036579506089317 0.000160352809834559 -2.76066791918529 -9.24613580334758 Q86YC2 PALB2 Q86YC2.S190.p_PALB2 Q86YC2_S190s _1_1_190_190 Q86YC2 Q86YC2 Partner and localizer of BRCA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10770.10770.3 8.03 3.46 4.834 4 1 1 0 903.472 2628.4357 S190s TMT10 178 (K) EQEEISSKNPARsPVTEIR (T) EQEEIS(0.0)S(0.0)KNPARS(0.99)PVT(0.0)EIR K:TMT10,s:Phosphorylated S PALB2 133061.7 1 2 934.1 198.86 HUMAN 1 -14.3676 -37.9492 SSKQSRKSPGDEDDK-p Q9Y3E1;S162-p SSKQSRKSPGDEDDK 0.565120063423305 0.00267247558884885 -0.162 0.801333333333333 4.56630379597281 39.0994520263838 -0.162 0.801333333333333 0.349437589150729 0.000123042401049146 -1.02394534801556 9.73359215170155 Q9Y3E1 HDGFRP3 Q9Y3E1.S162.p_HDGFRP3 Q9Y3E1_S162s _1_1_162_162 Q9Y3E1 Q9Y3E1 Hepatoma-derived growth factor-related protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7306.7306.4 15.95 8.09 99 1 1 1 0 812.9151 3168.6703 S162s TMT10 161 (R) KsPGDEDDKDCKEEENK (S) KS(1.0)PGDEDDKDCKEEENK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S HDGFL3 22676.4 10 1 2167.1 94.71 HUMAN 1 -4.5663 39.0995 SSKRLSKSNIDISSG-p Q9BZ71;S321-p SSKRLSKSNIDISSG 0.580127954969095 0.189277432033007 0.0726666666666667 -0.159 4.34937081130308 9.50595505739228 0.0726666666666667 -0.159 0.367335514762181 0.112048099396334 0.983350333119519 -1.89526618174499 Q9BZ71 PITPNM3 Q9BZ71.S321.p_PITPNM3 Q9BZ71_S321s _1_1_321_321 Q9BZ71 Q9BZ71|Q9BZ71-3 Membrane-associated phosphatidylinositol transfer protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16131.16131.4 13.63 13.63 7.466 3 1 1 0 698.3701 2710.4776 S321s TMT10 321 (K) sNIDISSGLEDEEPKRPLPR (K) S(0.99)NIDIS(0.0)S(0.0)GLEDEEPKRPLPR K:TMT10,s:Phosphorylated S PITPNM3 107863.3 2 1 4223.1 35.14 HUMAN 1 4.3494 -9.506 SSKRVSRSLDGAPIG-p O43491;S550-p SSKRVSRSLDGAPIG 0.614009932244783 0.380036344629246 -0.0746666666666667 -0.135666666666667 3.92996451256386 5.58468529189921 -0.0746666666666667 -0.135666666666667 0.404579197615518 0.276395819998365 -0.903718391475863 -1.20993850711961 O43491 EPB41L2 O43491.S550.p_EPB41L2 O43491_S550s _1_1_550_550 O43491 O43491|E9PHY5|O43491-4|E9PK52|O43491-3|E9PII3|O43491-2 Band 4.1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29493.29493.3 20.42 19.81 16.621 2 1 1 0 734.0435 2120.1496 S550s TMT10 550 (R) sLDGAPIGVMDQSLMK (D) S(0.99)LDGAPIGVMDQS(0.0)LMK K:TMT10,s:Phosphorylated S EPB41L2 113099.5 2 7 469.1 302.69 HUMAN 1 -3.93 -5.5847 SSKSKAESPKTPSSP-p O75764;S158-p SSKSKAESPKTPSSP 0.395667056501971 0.980819947989736 0.116333333333333 -0.00299999999999997 7.4293679674994 0.120405901686996 0.116333333333333 -0.00299999999999995 0.180743714475642 0.972656312815657 1.53598200855686 -0.0358874366667553 O75764 TCEA3 O75764.S158.p_TCEA3 O75764_S158s _1_1_158_158 O75764 O75764 Transcription elongation factor A protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30319.30319.4 14.73 15.86 1.279 11 1 1 0 1138.8191 4472.3119 S158s TMT10 156 (K) AEsPKTPSSPLTPTFASSMCLLAPCYLTGDSVRDK (C) AES(0.99)PKT(0.0)PS(0.0)S(0.0)PLT(0.0)PT(0.0)FAS(0.0)S(0.0)MCLLAPCY(0.0)LT(0.0)GDS(0.0)VRDK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TCEA3 39712.7 21 4 925.1 199.8 HUMAN 1 7.4294 -0.1204 SSKTDDLTCQQEETF-p Q14596;T504-p SSKTDDLTCQQEETF 0.0506176118125653 0.0014286003693118 0.590666666666667 0.977333333333333 28.5180639851497 45.983450152337 0.590666666666667 0.977333333333334 0.0014066744571975 2.52147684747893e-05 5.99360940388939 13.1802233385766 Q14596 NBR1 Q14596.T504.p_NBR1 Q14596_T504t _1_1_504_504 Q14596 Q14596|Q14596-2|B7Z5R6 Next to BRCA1 gene 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26356.26356.3 11.66 11.66 1.22 6 1 1 0 1123.8999 3289.7263 T504t TMT10 493 (K) GMISSSKTDDLtCQQEETFLLAK (E) GMIS(0.0)S(0.0)S(0.0)KT(0.0)DDLT(0.99)CQQEET(0.0)FLLAK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T NBR1 108552.4 1 4 3628.1 46.61 HUMAN 1 28.5181 45.9835 SSKTGRDTPENGETA-p Q8N3X1-2;T481-p SSKTGRDTPENGETA 0.535204694146268 0.00431829130477731 -0.129 0.572666666666667 5.02481129220716 34.754440849977 -0.129 0.572666666666667 0.314426304047214 0.000334623097486177 -1.10860297883878 8.00425062823552 Q8N3X1 FNBP4 Q8N3X1.2.T481.p_FNBP4 Q8N3X1-2_T481t _1_1_481_481 Q8N3X1-2 Q8N3X1-2 Isoform 2 of Formin-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7281.7281.4 18.95 15.11 1.137 7 1 1 0 808.9034 3152.6274 T481t TMT10 473 (R) SSSKTGRDtPENGETAIGAENSEK (I) S(0.0)S(0.0)S(0.0)KT(0.0)GRDT(0.99)PENGET(0.0)AIGAENS(0.0)EK K:TMT10,t:Phosphorylated T FNBP4 110905.5 2 10 405.1 325.34 HUMAN 1 -5.0248 34.7544 SSKTRAASCPAAKAG-p Q9ULI0;S52-p SSKTRAASCPAAKAG 0.0887698163036001 0.900704656188545 0.443666666666667 0.0216666666666667 22.3967847896413 0.635577320340002 0.443666666666667 0.0216666666666667 0.00575866110258457 0.863857817908411 4.41325844648483 0.179773819600919 Q9ULI0 ATAD2B Q9ULI0.S52.p_ATAD2B Q9ULI0_S52s _1_1_52_52 Q9ULI0 Q9ULI0|Q9ULI0-2 ATPase family AAA domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5987.5987.2 7.6 7.6 99 1 1 1 0 657.3373 1233.7026 S52s TMT10 50 (R) AAsCPAAK (A) AAS(1.0)CPAAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATAD2B 166451.5 1 2 531.1 280.81 HUMAN 1 22.3968 0.6356 SSKTYTVSPRKEDPG-p Q7Z2K8;S229-p SSKTYTVSPRKEDPG 0.519603537289599 0.00214315691592791 -0.0853333333333334 -0.905666666666667 5.25081405404068 41.487686596503 -0.0853333333333334 -0.905666666666667 0.298482308267431 7.09955847134137e-05 -1.14982883773056 -10.8211687777276 Q7Z2K8 GPRIN1 Q7Z2K8.S229.p_GPRIN1 Q7Z2K8_S229s _1_1_229_229 Q7Z2K8 Q7Z2K8|Q7Z2K8-2 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7546.7546.2 10.11 5.88 2.44 4 1 1 0 566.7836 1052.5938 S229s TMT10 225 (K) TYTVsPR (K) T(0.0)Y(0.0)T(0.0)VS(0.99)PR s:Phosphorylated S GPRIN1 103196.3 3 6 292.1 381.4 HUMAN 1 -5.2508 -41.4877 SSLAEPVSPSKKHET-p O43572;S187-p SSLAEPVSPSKKHET 0.104350694460848 0.00292360520383369 -0.372666666666667 -0.66 20.6920572859134 38.2491185974676 -0.372666666666667 -0.66 0.00852696089722812 0.000149653934858523 -4.02907269490925 -9.37105703590083 O43572 AKAP10 O43572.S187.p_AKAP10 O43572_S187s _1_1_187_187 O43572 O43572|E7EMD6 A-kinase anchor protein 10, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11579.11579.3 15 12.37 3.04 4 1 1 0 709.0691 2045.221 S187s TMT10 179 (K) QSSLAEPVsPSKK (H) QS(0.0)S(0.0)LAEPVS(0.99)PS(0.0)KK K:TMT10,s:Phosphorylated S AKAP10 74273.3 6 5 1844.1 111.39 HUMAN 1 -20.6921 -38.2491 SSLAGIPSPSLVSLP-p Q9H8V3;S889-p SSLAGIPSPSLVSLP 0.187254795627764 0.0167074720152343 0.204666666666667 -0.451 14.2936067980473 24.5341702766927 0.204666666666667 -0.451 0.0372082564841912 0.00352032672242421 2.74698632220876 -4.9207626285883 Q9H8V3 ECT2 Q9H8V3.S889.p_ECT2 Q9H8V3_S889s _1_1_889_889 Q9H8V3 Q9H8V3|Q9H8V3-4|Q9H8V3-2 Protein ECT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37369.37369.3 18.44 18.44 2.224 9 1 1 0 930.1503 2708.4708 S889s TMT10 878 (R) LSSTSSLAGIPsPSLVSLPSFFER (R) LS(0.0)S(0.0)T(0.0)S(0.0)S(0.0)LAGIPS(0.99)PS(0.0)LVS(0.0)LPS(0.0)FFER s:Phosphorylated S ECT2 104530 2 16 572.1 269.2 HUMAN 1 14.2936 -24.5342 SSLARTRSLSSLREK-p O94915;S1978-p SSLARTRSLSSLREK 0.747493618132389 0.566837648236199 -0.0456666666666667 -0.167 2.40034173791629 3.32568351960449 -0.0456666666666667 -0.167 0.575394658864475 0.464977189412115 -0.595742326933158 -0.785703062433443 O94915 FRYL O94915.S1978.p_FRYL O94915_S1978s _1_1_1978_1978 O94915 O94915 Protein furry homolog-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7249.7249.2 11.76 6.42 10.031 3 1 1 0 614.8293 1148.6837 S1978s Hydrogen 1978 (R) sLSSLREK (G) S(0.99)LS(0.0)S(0.0)LREK K:TMT10-Lys-Only,s:Phosphorylated S FRYL 342387.4 4 11 526.1 282.44 HUMAN 1 -2.4003 -3.3257 SSLEEEVSILNRQVL-p Q14980;S1235-p SSLEEEVSILNRQVL 0.772184255224755 0.0855947378764516 0.0443333333333333 0.417333333333333 2.1470221841086 14.127888454152 0.0443333333333333 0.417333333333333 0.609954980165583 0.0386554874893346 0.541120475151395 2.71478276203092 Q14980 NUMA1 Q14980.S1235.p_NUMA1 Q14980_S1235s _1_1_1235_1235 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-3|Q14980-4 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36318.36318.3 14.18 14.18 1.409 4 1 1 0 704.6973 2032.1124 S1235s TMT10 1224 (K) NSLISSLEEEVsILNR (Q) NS(0.0)LIS(0.0)S(0.0)LEEEVS(0.99)ILNR s:Phosphorylated S NUMA1 239339.3 1 14 31.1 900.97 HUMAN 1 2.147 14.1279 SSLELEESLPEQPET-p Q6WKZ4;S692-p SSLELEESLPEQPET 0.684296974001412 0.596255650817582 0.0593333333333333 -0.0546666666666667 3.08957655040438 3.04045697664183 0.0593333333333333 -0.0546666666666667 0.490955743414295 0.496540071384509 0.738548313711138 -0.728514610281176 Q6WKZ4 RAB11FIP1 Q6WKZ4.S692.p_RAB11FIP1 Q6WKZ4_S692s _1_1_692_692 Q6WKZ4 Q6WKZ4|Q6WKZ4-1 Rab11 family-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20903.20903.5 18.72 11.08 6.608 5 1 1 0 814.399 3988.001 S692s TMT10 683 (K) NTSSLELEEsLPEQPETGRQEEELPRFPCK (K) NT(0.0)S(0.0)S(0.0)LELEES(0.99)LPEQPET(0.0)GRQEEELPRFPCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RAB11FIP1 137564.1 2 17 56.1 721.17 HUMAN 1 3.0896 -3.0405 SSLENIFSRGANRMR-p O60343-2;S576-p SSLENIFSRGANRMR 0.806340238065947 0.394052618963842 0.0716666666666667 -0.145333333333333 1.80069982085373 5.37650092910311 0.0716666666666667 -0.145333333333333 0.660586992636583 0.289967889155548 0.464198813490363 -1.17237585744786 O60343 TBC1D4 O60343.2.S576.p_TBC1D4 O60343-2_S576s _1_1_576_576 O60343-2 O60343|O60343-3|O60343-2 Isoform 2 of TBC1 domain family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27652.27652.3 8.2 8.2 6.515 5 1 1 0 554.9479 1582.8638 S576s TMT10 566 (R) SLTSSLENIFsR (G) S(0.0)LT(0.0)S(0.0)S(0.0)LENIFS(0.99)R s:Phosphorylated S TBC1D4 141150.8 1 7 603.1 262.97 HUMAN 1 1.8007 -5.3765 SSLERTPSPEPVDKD-p Q9Y2I1;S1284-p SSLERTPSPEPVDKD 0.320124779698436 0.361659267804229 -0.158666666666667 -0.088 9.25843737942453 5.85999613284699 -0.158666666666667 -0.088 0.118619547245332 0.259418167209359 -1.85310927450805 -1.25928957861489 Q9Y2I1 NISCH Q9Y2I1.S1284.p_NISCH Q9Y2I1_S1284s _1_1_1284_1284 Q9Y2I1 Q9Y2I1|Q9Y2I1-2 Nischarin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20965.20965.3 14.72 14.72 1.761 4 1 1 0 865.7523 2515.2757 S1284s Hydrogen 1282 (R) TPsPEPVDKDFYSEFGNK (T) T(0.0)PS(0.99)PEPVDKDFY(0.0)S(0.0)EFGNK K:TMT10-Lys-Only,s:Phosphorylated S NISCH 168394.3 1 6 2683.1 74.06 HUMAN 1 -9.2584 -5.86 SSLFIIASKTFTTQE-p P06744-2;S221-p SSLFIIASKTFTTQE 0.663866351521158 0.255485970230905 -0.0666666666666667 0.154333333333333 3.32960734423325 7.80661834545778 -0.0666666666666667 0.154333333333333 0.464557275030431 0.165705973866938 -0.786599800692242 1.60110053626576 P06744 GPI P06744.2.S221.p_GPI P06744-2_S221s _1_1_221_221 P06744-2 P06744-2 Isoform 2 of Glucose-6-phosphate isomerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.33272.33272.3 17.08 17.27 2.139 4 1 1 0 790.7744 2290.3423 S221s TMT10 206 (K) TLAQLNPESSLFIIAsK (T) T(0.0)LAQLNPES(0.0)S(0.0)LFIIAS(0.99)K K:TMT10,s:Phosphorylated S GPI 64608.7 1 3 2374.1 86.23 HUMAN 1 -3.3296 7.8066 SSLGDHKSLEAEALA-p O43295;S954-p SSLGDHKSLEAEALA 0.0890933845513108 0.0346773811454659 -0.849666666666667 0.463333333333333 22.3698547972733 19.6643958274831 -0.849666666666667 0.463333333333333 0.00579448069464459 0.0108033990284638 -4.40702198568231 3.80381002324365 O43295 SRGAP3 O43295.S954.p_SRGAP3 O43295_S954s _1_1_954_954 O43295 O43295|O43295-2 SLIT-ROBO Rho GTPase-activating protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26369.26369.3 19.72 17.19 99 1 1 1 0 652.671 1876.0315 S954s TMT10 954 (K) sLEAEALAEDIEK (T) S(1.0)LEAEALAEDIEK K:TMT10,s:Phosphorylated S SRGAP3 125471.5 1 12 754.1 231.27 HUMAN 1 -22.3699 19.6644 SSLGDMFSPIRDDAV-p Q8NHV4-3;S418-p SSLGDMFSPIRDDAV 0.505122168097162 0.0537320353351949 -0.100333333333333 -0.243333333333333 5.47800258315085 16.9270363080771 -0.100333333333333 -0.243333333333333 0.283269451541505 0.0202906691344441 -1.19097823632436 -3.2458177356164 Q8NHV4 NEDD1 Q8NHV4.3.S418.p_NEDD1 Q8NHV4-3_S418s _1_1_418_418 Q8NHV4-3 Q8NHV4-3 Isoform 3 of Protein NEDD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25908.25908.3 10.47 10.47 2.832 3 1 1 0 830.4206 2409.2848 S418s TMT10 411 (K) SSLGDMFsPIRDDAVVNK (G) S(0.0)S(0.0)LGDMFS(0.99)PIRDDAVVNK K:TMT10,s:Phosphorylated S NEDD1 73336.3 2 4 1715.1 119.76 HUMAN 1 -5.478 -16.927 SSLGMEKSFATKNEA-p Q2NKX8;S835-p SSLGMEKSFATKNEA 0.649743378726889 0.0011418699812441 -0.0663333333333333 -1.592 3.51308861158659 48.8585597501417 -0.0663333333333333 -1.592 0.445339419662318 1.30060082449455e-05 -0.822831363945178 -14.935228111608 Q2NKX8 ERCC6L Q2NKX8.S835.p_ERCC6L Q2NKX8_S835s _1_1_835_835 Q2NKX8 Q2NKX8 DNA excision repair protein ERCC-6-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12384.12384.3 12.16 12.16 12.158 2 1 1 0 664.0382 1910.1314 S835s TMT10 835 (K) sFATKNEAVQK (E) S(0.99)FAT(0.0)KNEAVQK K:TMT10,s:Phosphorylated S ERCC6L 142070.4 1 6 422.1 320.12 HUMAN 1 -3.5131 -48.8586 SSLGNDETDKEKKKF-p O75128-2;T241-p SSLGNDETDKEKKKF 0.247048592039774 0.251979874963257 -0.281 0.334666666666667 11.6081627975622 7.88297755593115 -0.281 0.334666666666667 0.0690531858785961 0.162817935775742 -2.26302012574092 1.61434977059798 O75128 COBL O75128.2.T241.p_COBL O75128-2_T241t _1_1_241_241 O75128-2 O75128-2|O75128-7|O75128-3|O75128-4|O75128-5 Isoform 2 of Protein cordon-bleu HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10223.10223.4 8.11 5.13 1.212 4 1 1 0 624.3244 2414.313 T241t TMT10 229 (R) ETFRKSSLGNDEtDK (E) ET(0.0)FRKS(0.0)S(0.0)LGNDET(0.99)DK K:TMT10,t:Phosphorylated T COBL 144838.3 1 4 254.1 405.31 HUMAN 1 -11.6082 7.883 SSLGQSASETEEDTV-p Q13435;S309-p SSLGQSASETEEDTV 0.9425509765566 0.0714445769365603 0.0146666666666667 0.208666666666667 0.505820300983603 15.2343516998086 0.0146666666666666 0.208666666666667 0.890057306967415 0.0299615881555503 0.14486908020451 2.92057825273491 Q13435 SF3B2 Q13435.S309.p_SF3B2 Q13435_S309s _1_1_309_309 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13735.13735.4 26.48 26.48 2.708 8 1 1 0 831.442 3242.7773 S309s TMT10 302 (R) SSLGQSAsETEEDTVSVSKKEK (N) S(0.0)S(0.0)LGQS(0.0)AS(0.99)ET(0.0)EEDT(0.0)VS(0.0)VS(0.0)KKEK K:TMT10,s:Phosphorylated S SF3B2 100339.9 23 5 193.1 462.57 HUMAN 1 0.5058 15.2344 SSLGRAPSPRPGPGP-p Q8WUF5;S158-p SSLGRAPSPRPGPGP 0.955641444333664 0.17519541672696 -0.017 -0.27 0.38761080414625 9.94760916911276 -0.017 -0.27 0.914616263385391 0.101213649132451 -0.112323304738296 -1.97181710943086 Q8WUF5 PPP1R13L Q8WUF5.S158.p_PPP1R13L Q8WUF5_S158s _1_1_158_158 Q8WUF5 Q8WUF5 RelA-associated inhibitor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7977.7977.3 12.45 12.45 99 1 1 1 0 504.2743 1430.8429 S158s TMT10 156 (R) APsPRPGPGPLR (Q) APS(1.0)PRPGPGPLR s:Phosphorylated S PPP1R13L 89431.8 2 9 371.1 339.39 HUMAN 1 -0.3876 -9.9476 SSLGSLQTPEAVTTR-p C9J6P4;T393-p SSLGSLQTPEAVTTR 0.342075757494071 0.00714231278100688 0.336 -0.522666666666667 8.65455975264107 30.7129071964201 0.336 -0.522666666666667 0.136315118279459 0.000848612218143687 1.74856615516181 -6.64113656521399 C9J6P4 ZC3HAV1 C9J6P4.T393.p_ZC3HAV1 C9J6P4_T393t _1_1_393_393 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2|Q7Z2W4-3 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14864.14864.3 13.1 13.1 3.414 6 1 1 0 619.3188 1775.9701 T393t TMT10 386 (R) SSLGSLQtPEAVTTR (K) S(0.0)S(0.0)LGS(0.0)LQT(0.99)PEAVT(0.0)T(0.0)R t:Phosphorylated T ZC3HAV1 115909.2 2 12 361.1 343.37 HUMAN 1 8.6546 -30.7129 SSLHRTSSGTSLSAM-p Q12888-2;S1322-p SSLHRTSSGTSLSAM 0.194781776900602 0.0537770533272325 0.196666666666667 0.355 13.860623470747 16.9219636026714 0.196666666666667 0.355 0.0411090700915384 0.020314383164147 2.66736422868108 3.24482227769947 Q12888 TP53BP1 Q12888.2.S1322.p_TP53BP1 Q12888-2_S1322s _1_1_1322_1322 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7942.7942.2 11.26 11.26 1.143 10 1 1 0 1104.02 2127.0752 S1322s TMT10 1320 (R) TSsGTSLSAMHSSGSSGK (G) T(0.0)S(0.0)S(0.99)GT(0.0)S(0.0)LS(0.0)AMHS(0.0)S(0.0)GS(0.0)S(0.0)GK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 6 55 3.1 2297.07 HUMAN 1 13.8606 16.922 SSLLAKDSPPTPTMY-p Q9C0B5;S345-p SSLLAKDSPPTPTMY 0.317658987974676 0.476263635225953 0.14 0.0736666666666667 9.32917250552135 4.29701743363665 0.14 0.0736666666666667 0.116703195939931 0.371790472744118 1.86536057674552 0.973321824729623 Q9C0B5 ZDHHC5 Q9C0B5.S345.p_ZDHHC5 Q9C0B5_S345s _1_1_345_345 Q9C0B5 Q9C0B5|Q9C0B5-2 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21709.21709.4 20.38 20.38 1.217 8 1 1 0 889.4665 3474.8757 S345s TMT10 328 (R) THLGLATNEDSSLLAKDsPPTPTMYK (Y) T(0.0)HLGLAT(0.0)NEDS(0.0)S(0.0)LLAKDS(0.99)PPT(0.0)PT(0.0)MY(0.0)K K:TMT10,s:Phosphorylated S ZDHHC5 78285 7 4 134.1 530.74 HUMAN 1 9.3292 4.297 SSLNFKVTPDIEESL-p Q14151;T201-p SSLNFKVTPDIEESL 0.315598529821818 0.00739364751151586 -0.192333333333333 0.451333333333333 9.37419100097644 30.4723839636442 -0.192333333333333 0.451333333333333 0.115499711625453 0.000896936305966488 -1.87315898149 6.56652017131303 Q14151 SAFB2 Q14151.T201.p_SAFB2 Q14151_T201t _1_1_201_201 Q14151 Q14151 Scaffold attachment factor B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30057.30057.4 18.1 16.14 1.716 6 1 1 0 961.752 3764.0096 T201t TMT10 189 (K) NTLETSSLNFKVtPDIEESLLEPENEK (I) NT(0.0)LET(0.0)S(0.0)S(0.0)LNFKVT(0.99)PDIEES(0.0)LLEPENEK K:TMT10,t:Phosphorylated T SAFB2 107985.1 5 3 83.3 629.62 HUMAN 1 -9.3742 30.4724 SSLNQDNSLAEDNLK-p Q15643;S412-p SSLNQDNSLAEDNLK 0.76976565880788 0.00951905470218504 0.0463333333333333 -0.447 2.17762821262852 28.5179120257083 0.0463333333333333 -0.447 0.605671556358114 0.00140672367753378 0.547789390779686 -5.98469108785898 Q15643 TRIP11 Q15643.S412.p_TRIP11 Q15643_S412s _1_1_412_412 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20636.20636.3 13.47 13.47 7.857 3 1 1 0 767.0555 2219.192 S412s TMT10 404 (R) LSSLNQDNsLAEDNLK (L) LS(0.0)S(0.0)LNQDNS(0.99)LAEDNLK K:TMT10,s:Phosphorylated S TRIP11 228267 3 3 463.1 303.86 HUMAN 1 2.1776 -28.5179 SSLPQLPSPSSPGAP-p E9PGC8;S2473-p SSLPQLPSPSSPGAP 0.961041943860475 0.779005251594008 0.0103333333333333 -0.04 0.331777741606398 1.50250959645455 0.0103333333333333 -0.04 0.926450512375817 0.707536811883422 0.0966929966169746 -0.395533607924684 E9PGC8 NotFound E9PGC8.S2473.p_NotFound E9PGC8_S2473s _1_1_2473_2473 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.33105.33105.3 15.19 15.19 2.377 7 1 1 0 1003.199 2927.604 S2473s TMT10 2461 (K) APSLDSSLPQLPsPSSPGAPLLSNLPR (P) APS(0.0)LDS(0.0)S(0.0)LPQLPS(0.99)PS(0.0)S(0.0)PGAPLLS(0.0)NLPR s:Phosphorylated S MAP1A 332906.7 2 38 20.1 1016.98 HUMAN 1 0.3318 -1.5025 SSLPRSYTMDDAWKY-p Q8WWI1-3;T598-p SSLPRSYTMDDAWKY 0.560135693219576 0.0230455369253444 0.117333333333333 -0.325 4.64171581315494 22.3531806124539 0.117333333333333 -0.325 0.343422241636018 0.00581677062933179 1.0379715269986 -4.39841560614933 Q8WWI1 LMO7 Q8WWI1.3.T598.p_LMO7 Q8WWI1-3_T598t _1_1_598_598 Q8WWI1-3 Q8WWI1|Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19420.19420.4 11.49 11.49 1.1 4 1 1 0 769.1282 2993.5282 T598t TMT10 596 (R) SYtMDDAWKYNGDVEDIKR (T) S(0.0)Y(0.0)T(0.99)MDDAWKY(0.0)NGDVEDIKR K:TMT10,t:Phosphorylated T LMO7 154694.3 6 15 61.1 704.74 HUMAN 1 4.6417 -22.3532 SSLQKSSSLGNLKKE-p Q86W92-2;S449-p SSLQKSSSLGNLKKE 0.17581060681965 0.0687466886369453 -0.241 -0.222 15.0113526439114 15.4644720245031 -0.241 -0.222 0.0315402212567942 0.0284153361164485 -2.88058064128555 -2.96401766720819 Q86W92 PPFIBP1 Q86W92.2.S449.p_PPFIBP1 Q86W92-2_S449s _1_1_449_449 Q86W92-2 Q86W92|Q86W92-2|Q86W92-4|Q86W92-3 Isoform 2 of Liprin-beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13674.13674.2 11.98 3.88 1.323 3 1 1 0 672.37 1263.7673 S449s TMT10 447 (K) SSsLGNLK (K) S(0.0)S(0.0)S(0.99)LGNLK K:TMT10,s:Phosphorylated S PPFIBP1 113749.6 7 9 449.1 309.07 HUMAN 1 -15.0114 -15.4645 SSLRRHGSMVSLVSG-p Q9Y5P4;S132-p SSLRRHGSMVSLVSG 0.521568145132861 0.434610302812453 0.158333333333333 -0.0986666666666666 5.22719485532526 4.82206504405573 0.158333333333333 -0.0986666666666667 0.30011003291017 0.32945302200378 1.14553448340141 -1.07113741598035 Q9Y5P4 COL4A3BP Q9Y5P4.S132.p_COL4A3BP Q9Y5P4_S132s _1_1_132_132 Q9Y5P4 Q9Y5P4-3|Q9Y5P4-2 Collagen type IV alpha-3-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20569.20569.3 23.83 21.43 2.598 11 1 1 0 929.4557 2706.3809 S132s TMT10 130 (R) HGsMVSLVSGASGYSATSTSSFK (K) HGS(0.99)MVS(0.0)LVS(0.0)GAS(0.0)GY(0.0)S(0.0)AT(0.0)S(0.0)T(0.0)S(0.0)S(0.0)FK K:TMT10,s:Phosphorylated S COL4A3BP 71518.3 2 3 1173.1 170.04 HUMAN 1 5.2272 -4.8221 SSLSPAQSPSQSQPP-p Q6WCQ1-2;S224-p SSLSPAQSPSQSQPP 0.350553974320356 0.0955876725450255 0.213333333333333 -0.264333333333333 8.45615223861956 13.485358300288 0.213333333333333 -0.264333333333333 0.142687121282017 0.0448192071867801 1.71421369038107 -2.5974155880211 Q6WCQ1 MPRIP Q6WCQ1.2.S224.p_MPRIP Q6WCQ1-2_S220sS224s_2_2_220_224 Q6WCQ1-2 Q6WCQ1-2|Q6WCQ1-3 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15915.15942.5 21.53 21.44 2.217 10 2 2 0 883.2354 4252.23 S220s S224s TMT10 210 (R) TKDQPDGSSLsPAQsPSQSQPPAASSLREPGLESK (E) T(0.0)KDQPDGS(0.0)S(0.0)LS(0.99)PAQS(0.99)PS(0.0)QS(0.0)QPPAAS(0.0)S(0.0)LREPGLES(0.0)K K:TMT10,s:Phosphorylated S MPRIP 118899.7 2 19 204.1 449.03 HUMAN 1 8.4562 -13.4854 SSLSREVSQHFNQAP-p J3KNL6;S2304-p SSLSREVSQHFNQAP 0.34756541026006 0.892173292927516 0.159 0.0163333333333334 8.52892096131577 0.696328068111234 0.159 0.0163333333333334 0.140316228792572 0.85185797424262 1.72681432833589 0.195850580595283 J3KNL6 SEC16A J3KNL6.S2304.p_SEC16A J3KNL6_S2304s_1_1_2304_2304 J3KNL6 J3KNL6|O15027-5|O15027-4 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26017.26017.4 19.65 19.65 7.775 7 1 1 0 1163.7925 4571.167 S2304s N2329n TMT10 2302 (R) EVsQHFNQAPGDLPAAGGPPSGAMPFYnPAQLAQACATSGSSR (L) EVS(0.99)QHFN(0.0)QAPGDLPAAGGPPS(0.0)GAMPFY(0.0)N(0.99)PAQLAQACAT(0.0)S(0.0)GS(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated SEC16A 253486.5 1 48 15.1 1143.82 HUMAN 1 8.5289 0.6963 SSLTVDVTPPTAKAP-p Q9H8Y8-3;T427-p SSLTVDVTPPTAKAP 0.597918768837268 0.3842710040419 -0.0706666666666667 -0.0836666666666666 4.12389407694337 5.52068493267393 -0.0706666666666667 -0.0836666666666667 0.386910568166959 0.280499122347785 -0.940739198478538 -1.19841452353851 Q9H8Y8 GORASP2 Q9H8Y8.3.T427.p_GORASP2 Q9H8Y8-3_T427t _1_1_427_427 Q9H8Y8-3 Q9H8Y8-3|Q9H8Y8-2 Isoform 3 of Golgi reassembly-stacking protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19999.20203.2 21.93 17.53 3.136 5 1 1 0 1091.5737 2102.1745 T427t TMT10 416 (K) ADAASSLTVDVtPPTAK (A) ADAAS(0.0)S(0.0)LT(0.0)VDVT(0.99)PPT(0.0)AK K:TMT10,t:Phosphorylated T GORASP2 48958.5 10 7 992.1 191.2 HUMAN 1 -4.1239 -5.5207 SSLVKDASVPLIDVT-p Q96A65;S226-p SSLVKDASVPLIDVT 0.167300432977981 0.0961091715458491 0.347333333333333 -0.292333333333333 15.5278369383328 13.451615355952 0.347333333333333 -0.292333333333333 0.0280037573688626 0.0451687908055797 2.97804613197141 -2.59129176880236 Q96A65 EXOC4 Q96A65.S226.p_EXOC4 Q96A65_S226s _1_1_226_226 Q96A65 Q96A65|Q96A65-2 Exocyst complex component 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.28124.28275.3 17.2 17.2 8.077 3 1 1 0 673.0244 1937.0905 S226s TMT10 224 (K) DAsVPLIDVTNLPTPR (K) DAS(0.99)VPLIDVT(0.0)NLPT(0.0)PR s:Phosphorylated S EXOC4 111237.8 3 5 1685.1 121.05 HUMAN 1 15.5278 -13.4516 SSLVNGKSPIRSLMH-p Q9UPN9;S862-p SSLVNGKSPIRSLMH 0.828664247875221 0.0184816815370956 0.031 -0.357 1.56759052035428 23.8515364654993 0.031 -0.357 0.697013111956962 0.00411951751270065 0.410759792459516 -4.75308397070327 Q9UPN9 TRIM33 Q9UPN9.S862.p_TRIM33 Q9UPN9_S862s_1_1_862_862 Q9UPN9 Q9UPN9|Q9UPN9-2 E3 ubiquitin-protein ligase TRIM33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17129.17840.3 17.83 14.38 4.764 4 1 1 0 694.7166 2001.1857 N859n S862s TMT10 851 (K) QSGLSSLVnGKsPIR (S) QS(0.0)GLS(0.0)S(0.0)LVN(1.0)GKS(0.99)PIR K:TMT10,n:Deamidated,s:Phosphorylated S TRIM33 124699.1 13 7 1379.1 148.46 HUMAN 1 1.5676 -23.8515 SSLVNLDSLVKAPQV-p Q9H201;S512-p SSLVNLDSLVKAPQV 0.276181983641786 0.827950080485717 0.168666666666667 -0.0273333333333333 10.5715725204696 1.14713744844902 0.168666666666667 -0.0273333333333333 0.0876683328715374 0.767867444651396 2.08121113327862 -0.310358498103723 Q9H201 EPN3 Q9H201.S512.p_EPN3 Q9H201_S512s _1_1_512_512 Q9H201 Q9H201 Epsin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35313.35313.3 15.48 11.37 1.117 6 1 1 0 900.4835 2619.4646 S512s TMT10 495 (R) TPESFLGPSASSLVNLDsLVK (A) T(0.0)PES(0.0)FLGPS(0.0)AS(0.0)S(0.0)LVNLDS(0.99)LVK K:TMT10,s:Phosphorylated S EPN3 68392.2 1 14 953.1 196.01 HUMAN 1 10.5716 -1.1471 SSLWDPASPAPTSGP-p O43189;S20-p SSLWDPASPAPTSGP 0.46012644875572 0.577442919963717 0.154666666666667 0.106 6.21663334256487 3.21706859168061 0.154666666666667 0.106 0.238966303550272 0.476752677562952 1.32306469299905 0.764055063110784 O43189 PHF1 O43189.S20.p_PHF1 O43189_S20s _1_1_20_20 O43189 O43189|O43189-2|E9PQT8|A0A140TA01|E9PQZ5|A0A087WVG4 PHD finger protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15885.15885.3 18.47 15.37 4.04 6 1 1 0 801.7279 2323.1992 S20s TMT10 10 (R) SGASSLWDPAsPAPTSGPRPR (L) S(0.0)GAS(0.0)S(0.0)LWDPAS(0.99)PAPT(0.0)S(0.0)GPRPR s:Phosphorylated S PHF1 63416.9 3 1 2838.1 68.46 HUMAN 1 6.2166 3.2171 SSLWEEASDEGTLGG-p Q9UPV0;S1205-p SSLWEEASDEGTLGG 0.701425625518073 0.191953099169987 0.0563333333333333 0.150666666666667 2.89690612121186 9.42356409329952 0.0563333333333333 0.150666666666667 0.513226872466286 0.114194080179573 0.699393838592701 1.88100112174152 Q9UPV0 CEP164 Q9UPV0.S1205.p_CEP164 Q9UPV0_S1205s _1_1_1205_1205 Q9UPV0 Q9UPV0 Centrosomal protein of 164 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29340.29340.3 19.83 19.83 1.166 6 1 1 0 1029.5094 3006.5308 S1205s TMT10 1193 (K) LNQLESSLWEEAsDEGTLGGSPTK (K) LNQLES(0.0)S(0.0)LWEEAS(0.99)DEGT(0.0)LGGS(0.0)PT(0.0)K K:TMT10,s:Phosphorylated S CEP164 164824.4 2 4 1433.1 142.71 HUMAN 1 2.8969 9.4236 SSLYFPRSPSANEKS-p E9PG19;S705-p SSLYFPRSPSANEKS 0.862492352854935 0.00232270963531279 -0.0293333333333333 -0.760333333333333 1.25449789051413 40.5617689266867 -0.0293333333333333 -0.760333333333334 0.749117962763859 8.78664554704451e-05 -0.336552174413752 -10.3869497963457 E9PG19 NotFound E9PG19.S705.p_NotFound E9PG19_S705s _1_1_705_705 E9PG19 E9PG19|O94868|O94868-2|E7ENZ2|B8ZZW8 F-BAR and double SH3 domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14997.14997.3 15.33 10.32 2.298 5 1 1 0 707.698 2041.1119 S705s TMT10 698 (R) SSLYFPRsPSANEK (S) S(0.0)S(0.0)LY(0.0)FPRS(0.99)PS(0.0)ANEK K:TMT10,s:Phosphorylated S FCHSD2 87326.4 2 2 4162.1 36.41 HUMAN 1 -1.2545 -40.5618 SSMGVRNSPQALRRT-p Q7L7X3;S965-p SSMGVRNSPQALRRT 0.765698874841285 0.897487191475675 0.045 -0.0146666666666667 2.22689576355282 0.658096940762825 0.0433146279847196 -0.0146666666666667 0.598839478721786 0.859390019920255 0.558483385971453 -0.185752892299684 Q7L7X3 TAOK1 Q7L7X3.S965.p_TAOK1 Q7L7X3_S965s _1_1_965_965 Q7L7X3 Q7L7X3|Q7L7X3-3 Serine/threonine-protein kinase TAO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6830.6830.3 13 7.63 4.767 3 1 1 0 590.2958 1688.9064 S965s TMT10 957 (R) GSSMGVRNsPQALR (R) GS(0.0)S(0.0)MGVRNS(0.99)PQALR s:Phosphorylated S TAOK1 116524.7 9 8 1125.1 174.76 HUMAN 1 2.2269 -0.6581 SSMNAMGSLSVLSPD-p Q92616;S729-p SSMNAMGSLSVLSPD 0.420944975696746 0.477159607191593 0.132666666666667 0.0983333333333334 6.93115550824527 4.28538344873555 0.132666666666667 0.0983333333333334 0.202714329465404 0.372787769187556 1.44895688685139 0.971129543194046 Q92616 GCN1 Q92616.S729.p_GCN1 Q92616_S729s _1_1_729_729 Q92616 Q92616 eIF-2-alpha kinase activator GCN1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.37530.37530.4 31.85 31.85 1.314 12 1 1 0 1241.6409 4883.563 S729s TMT10 713 (R) MTTQSPLNQSSMNAMGsLSVLSPDRVLPQLISTITASVQNPALR (L) MT(0.0)T(0.0)QS(0.0)PLNQS(0.0)S(0.0)MNAMGS(0.99)LS(0.0)VLS(0.0)PDRVLPQLIS(0.0)T(0.0)IT(0.0)AS(0.0)VQNPALR s:Phosphorylated S GCN1 295149.3 6 2 3069.1 61.61 HUMAN 1 6.9312 4.2854 SSMPGGSTPVSSANM-p P68400;T344-p SSMPGGSTPVSSANM 0.429850817483468 0.0879967699826289 0.106 0.244666666666667 6.75222260701141 13.9726463614775 0.106 0.244666666666667 0.211240768744997 0.0400622525002357 1.41756750693405 2.68629005386067 P68400 CSNK2A1 P68400.T344.p_CSNK2A1 P68400_T344t_1_1_344_344 P68400 P68400|P68400-2 Casein kinase II subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.37385.37385.4 26.03 24.99 1.102 13 1 1 0 1414.6857 5574.7612 T344t N377n TMT10 334 (R) MGSSSMPGGStPVSSANMMSGISSVPTPSPLGPLAGSPVIAAAnPLGMPVPAAAGAQQ (-) M(0.0)GS(0.0)S(0.0)S(0.0)M(0.0)PGGS(0.0)T(0.99)PVS(0.0)S(0.0)AN(0.0)M(0.0)M(0.0)S(0.0)GIS(0.0)S(0.0)VPT(0.0)PS(0.0)PLGPLAGS(0.0)PVIAAAN(0.99)PLGM(0.0)PVPAAAGAQQ t:Phosphorylated T,n:Deamidated CSNK2A1 45256.9 11 7 2696.1 73.72 HUMAN 1 6.7522 13.9726 SSMSRAQSPPVPARK-p Q1MSJ5;S920-p SSMSRAQSPPVPARK 0.920202571641394 0.00917359434218356 0.0153333333333333 -0.425333333333333 0.705772593088763 28.7974811405671 0.0153333333333333 -0.425333333333333 0.850007466695259 0.00131902153448933 0.198353827207294 -6.06532545875037 Q1MSJ5 CSPP1 Q1MSJ5.S920.p_CSPP1 Q1MSJ5_S920s _1_1_920_920 Q1MSJ5 Q1MSJ5|Q1MSJ5-1|Q1MSJ5-2 Centrosome and spindle pole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8283.8283.2 11.47 11.47 99 1 1 1 0 794.9526 1508.9313 S920s TMT10 918 (R) AQsPPVPARK (N) AQS(1.0)PPVPARK K:TMT10,s:Phosphorylated S CSPP1 145804.7 3 6 1677.1 121.74 HUMAN 1 0.7058 -28.7975 SSNADSASPDLGPRG-p Q8TE68;S239-p SSNADSASPDLGPRG 0.986914559767855 0.908800328941999 -0.00400000000000001 -0.0193333333333333 0.116887207655298 0.58129143192408 -0.004 -0.0193333333333333 0.97344468728101 0.874723625942426 -0.0348554072099935 -0.165263559856053 Q8TE68 EPS8L1 Q8TE68.S239.p_EPS8L1 Q8TE68_S239s _1_1_239_239 Q8TE68 Q8TE68|B4DKV7|Q8TE68-2|Q8TE68-3|K7EN83|K7EKX9 Epidermal growth factor receptor kinase substrate 8-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11159.11159.4 23.45 20.9 2.177 5 1 1 0 1063.286 4170.158 S239s TMT10 210 (R) GRPQAKPIPEAEEAQRPEPVGTSSNADSAsPDLGPR (G) GRPQAKPIPEAEEAQRPEPVGT(0.0)S(0.0)S(0.0)NADS(0.0)AS(0.99)PDLGPR K:TMT10,s:Phosphorylated S EPS8L1 80534.9 3 6 326.1 361.27 HUMAN 1 -0.1169 -0.5813 SSNGLPPSPIPSPTT-p Q96E09;S173-p SSNGLPPSPIPSPTT 0.572570864246015 0.990324797150279 0.126666666666667 -0.00233333333333328 4.46071717760286 0.0621622346975484 0.126666666666667 -0.00233333333333328 0.358037307283773 0.985788565983744 1.00423366833121 -0.0186484475061463 Q96E09 FAM122A Q96E09.S173.p_FAM122A Q96E09_S173s_1_1_173_173 Q96E09 Q96E09 Protein FAM122A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28509.28711.3 16.2 16.2 3.571 9 1 1 0 1066.8577 3117.5877 N168n S173s TMT10 155 (K) QCFSPSLQSFVSSnGLPPsPIPSPTTR (F) QCFS(0.0)PS(0.0)LQS(0.0)FVS(0.0)S(0.0)N(1.0)GLPPS(0.99)PIPS(0.0)PT(0.0)T(0.0)R C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S FAM122A 30813.8 3 7 509.1 287.77 HUMAN 1 4.4607 -0.0622 SSNHSARSPFEGAVT-p O95628-9;S321-p SSNHSARSPFEGAVT 0.421140316027267 0.821847802742782 0.252666666666667 0.0483333333333334 6.91638372015491 1.19278432292743 0.252666666666667 0.0483333333333333 0.203405001712679 0.759838977307988 1.44636854178035 0.321528409739182 O95628 CNOT4 O95628.9.S321.p_CNOT4 O95628-9_S321s _1_1_321_321 O95628-9 O95628-6|O95628-10|O95628-9|O95628-7 Isoform 9 of CCR4-NOT transcription complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27707.27707.2 11.58 11.58 11.581 5 1 1 0 1099.4741 2117.9774 S321s Hydrogen 321 (R) sPFEGAVTESQSLFSDNFR (H) S(0.99)PFEGAVT(0.0)ES(0.0)QS(0.0)LFS(0.0)DNFR s:Phosphorylated S CNOT4 78491.8 2 7 1032.1 185.91 HUMAN 1 6.9164 1.1928 SSNIVKVSPRESSSA-p Q8IZH2;S1645-p SSNIVKVSPRESSSA 0.777963814153508 0.0066075576923939 -0.0493333333333333 -0.484333333333333 2.0950259968817 31.3320862455567 -0.0493333333333334 -0.484333333333333 0.617301596708274 0.000735853526357571 -0.529744881636672 -6.83640273869416 Q8IZH2 XRN1 Q8IZH2.S1645.p_XRN1 Q8IZH2_S1645s _1_1_1645_1645 Q8IZH2 Q8IZH2|Q8IZH2-2 5'-3' exoribonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12747.12747.4 19.8 19.8 1.114 8 1 1 0 820.6733 3199.6959 S1645s TMT10 1622 (K) EAQSSQATPVQTSQPDSSNIVKVsPR (E) EAQS(0.0)S(0.0)QAT(0.0)PVQT(0.0)S(0.0)QPDS(0.0)S(0.0)NIVKVS(0.99)PR K:TMT10,s:Phosphorylated S XRN1 195644.2 3 8 2073.1 99.19 HUMAN 1 -2.095 -31.3321 SSNNGSASPTKTKSG-p Q02446;S136-p SSNNGSASPTKTKSG 0.898522472312718 0.30619191834763 -0.024 -0.121333333333333 0.909431691404975 6.79051547449977 -0.024 -0.121333333333333 0.811067185450338 0.209386391538901 -0.25100344042951 -1.42391023503404 Q02446 SP4 Q02446.S136.p_SP4 Q02446_S136s _1_1_136_136 Q02446 Q02446 Transcription factor Sp4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6266.6266.3 23.7 23.7 1.578 13 1 1 0 1012.7984 2956.4132 S136s TMT10 114 (K) ENNVSQPASSSSSSSSSNNGSAsPTK (T) ENNVS(0.0)QPAS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)NNGS(0.0)AS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S SP4 82611.1 3 3 1474.1 139.4 HUMAN 1 -0.9094 -6.7905 SSNQLDKSQKLPDVK-p A2AJT9;S393-p SSNQLDKSQKLPDVK 0.0386603595331013 0.262246216011945 -0.996666666666667 0.226666666666667 32.1682236644264 7.6582263838076 -0.996666666666667 0.226666666666667 0.000606984545445091 0.171465741385978 -7.11991378769287 1.57533261549666 A2AJT9 CXorf23 A2AJT9.S393.p_CXorf23 A2AJT9_S393s _1_1_393_393 A2AJT9 A2AJT9 BCLAF1 and THRAP3 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17788.17788.4 13.24 13.24 13.243 2 1 1 0 615.6161 2379.4691 S393s TMT10 393 (K) sQKLPDVKPSPINLR (K) S(0.99)QKLPDVKPS(0.0)PINLR K:TMT10,s:Phosphorylated S BCLAF3 84269.3 1 8 1202.1 166.95 HUMAN 1 -32.1682 7.6582 SSNQSISSPVLDAVP-p Q9UQ35;S1404-p SSNQSISSPVLDAVP 0.827721689148675 0.260943878374955 -0.031 0.136 1.57969779922828 7.6887022434328 -0.031 0.136 0.695072682051551 0.170266722253981 -0.413571349175412 1.58062699554681 Q9UQ35 SRRM2 Q9UQ35.S1404.p_SRRM2 Q9UQ35_S1403sS1404s_2_2_1403_1404 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17151.17151.3 10.79 10.79 1.66 7 2 2 0 921.4283 2586.3507 M1396m S1403s S1404s TMT10 1394 (K) AGmSSNQSIssPVLDAVPRTPSR (E) AGM(1.0)S(0.0)S(0.0)NQS(0.0)IS(0.99)S(0.99)PVLDAVPRT(0.0)PS(0.0)R m:Oxidized methionine,s:Phosphorylated S SRRM2 300351.7 16 207 2.1 3310.34 HUMAN 1 -1.5797 7.6887 SSNQTAPSLNNIIKA-p Q9UPN4-2;S208-p SSNQTAPSLNNIIKA 0.364003673479539 0.00816768591511242 0.127333333333333 -0.475666666666667 8.14374911958802 29.7250117689042 0.127333333333333 -0.475666666666667 0.153329277073626 0.00106536597663869 1.66008842052775 -6.33896554189779 Q9UPN4 CEP131 Q9UPN4.2.S208.p_CEP131 Q9UPN4-2_S208s_1_1_208_208 Q9UPN4-2 Q9UPN4|Q9UPN4-2|I3L2J8|Q9UPN4-3 Isoform 2 of Centrosomal protein of 131 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22284.22284.3 11.71 11.54 1.229 4 1 1 0 676.0258 1945.1119 S208s N210n TMT10 201 (K) SSNQTAPsLnNIIK (A) S(0.0)S(0.0)N(0.0)QT(0.0)APS(0.99)LN(0.99)N(0.0)IIK K:TMT10,s:Phosphorylated S,n:Deamidated CEP131 122301.7 2 10 359.1 345.98 HUMAN 1 8.1437 -29.725 SSNSDGISPKRRRLS-p Q13535;S428-p SSNSDGISPKRRRLS 0.27927883174395 0.236203310662146 0.157 0.259333333333333 10.4724712198344 8.25320502903887 0.157 0.259333333333333 0.0896918285369425 0.149513186365277 2.06392792053376 1.67850886821286 Q13535 ATR Q13535.S428.p_ATR Q13535_S428s_1_1_428_428 Q13535 Q13535|Q13535-3|Q13535-2 Serine/threonine-protein kinase ATR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28544.28544.4 20.13 16.17 1.109 6 1 1 0 970.6938 3783.8127 M402m S428s TMT10 402 (K) mESMEIIEEIQCQTQQENLSSNSDGIsPK (R) M(0.99)ES(0.0)M(0.0)EIIEEIQCQT(0.0)QQENLS(0.0)S(0.0)NS(0.0)DGIS(0.99)PK C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,s:Phosphorylated S ATR 304955.6 5 1 3206.1 57.57 HUMAN 1 10.4725 8.2532 SSNSDPPSPPVLNNS-p O60293;S655-p SSNSDPPSPPVLNNS 0.5493736861152 0.413827065928797 0.0826666666666667 0.0776666666666667 4.80356871788639 5.09731396116108 0.0826666666666667 0.0776666666666667 0.330859133646042 0.309220731980172 1.06793497765252 1.12163140021717 O60293 ZFC3H1 O60293.S655.p_ZFC3H1 O60293_S655s _1_1_655_655 O60293 O60293|O60293-2 Zinc finger C3H1 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15197.15197.4 26.15 19.16 5.707 6 1 1 0 860.4315 3358.7432 S655s TMT10 641 (R) AFKPEETSSNSDPPsPPVLNNSHPVPR (S) AFKPEET(0.0)S(0.0)S(0.0)NS(0.0)DPPS(0.99)PPVLNNS(0.0)HPVPR K:TMT10,s:Phosphorylated S ZFC3H1 228291.3 12 10 311.1 371.67 HUMAN 1 4.8036 5.0973 SSNTSVGSPSNTIGR-p Q7Z460-4;S1069-p SSNTSVGSPSNTIGR 0.889507115897402 0.00887586990450017 0.0366666666666667 -0.498333333333333 0.993232440712857 29.0694775008323 0.0366666666666667 -0.498333333333334 0.795566991889929 0.0012389456349642 0.272179993896545 -6.14458655658809 Q7Z460 CLASP1 Q7Z460.4.S1069.p_CLASP1 Q7Z460-4_S1069s _1_1_1069_1069 Q7Z460-4 Q7Z460-3|Q7Z460-5|F8WA11|Q7Z460-4|Q7Z460-2 Isoform 4 of CLIP-associating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6302.6302.3 11.76 10.88 2 9 1 1 0 776.7108 2248.1479 S1069s TMT10 1061 (K) NSSNTSVGsPSNTIGRTPSR (H) NS(0.0)S(0.0)NT(0.0)S(0.0)VGS(0.99)PS(0.0)NT(0.0)IGRT(0.0)PS(0.0)R s:Phosphorylated S CLASP1 164028.5 2 49 158.3 498.15 HUMAN 1 0.9932 -29.0695 SSNVASVSPIPAGSK-p Q9Y6G9;S421-p SSNVASVSPIPAGSK 0.603336413717383 0.00564587648094507 -0.0716666666666667 -0.530333333333333 4.05216814966603 32.5816601118775 -0.0716666666666667 -0.530333333333333 0.393353650554425 0.000551866445311347 -0.927088540208003 -7.24490886715741 Q9Y6G9 DYNC1LI1 Q9Y6G9.S421.p_DYNC1LI1 Q9Y6G9_S421s _1_1_421_421 Q9Y6G9 Q9Y6G9|E9PHI6 Cytoplasmic dynein 1 light intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16331.16331.2 17.24 17.24 1.462 6 1 1 0 1063.0682 2045.1643 S421s TMT10 412 (R) SVSSNVASVsPIPAGSK (K) S(0.0)VS(0.0)S(0.0)NVAS(0.0)VS(0.99)PIPAGS(0.0)K K:TMT10,s:Phosphorylated S DYNC1LI1 56863.4 9 11 510.1 287.75 HUMAN 1 -4.0522 -32.5817 SSPAQNWTPPQPRTL-p Q8N6T3;T135-p SSPAQNWTPPQPRTL 0.69223739326445 0.540311378270464 0.054 -0.058 2.99549051397735 3.59641135815102 0.054 -0.058 0.50170791042797 0.436876681027793 0.719496222458988 -0.839019931594622 Q8N6T3 ARFGAP1 Q8N6T3.T135.p_ARFGAP1 Q8N6T3_T135t _1_1_135_135 Q8N6T3 Q8N6T3-2|Q8N6T3-3|Q8N6T3-5 ADP-ribosylation factor GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26107.26107.4 22.63 22.63 4.095 4 1 1 0 804.4035 3134.6221 T135t TMT10 115 (K) VVALAEGREWSLESSPAQNWtPPQPR (T) VVALAEGREWS(0.0)LES(0.0)S(0.0)PAQNWT(0.99)PPQPR t:Phosphorylated T ARFGAP1 45009.4 8 2 243.1 413.25 HUMAN 1 2.9955 -3.5964 SSPEDSGYMRMWCGS-p Q9Y4H2;Y742-p SSPEDSGYMRMWCGS 0.0253434244716536 0.000952253650599092 2.54133333333333 1.82 37.0046281360029 54.7580952691194 2.54133333333333 1.82 0.000199313716092815 3.34341643597974e-06 8.88085877318084 19.2666579514113 Q9Y4H2 IRS2 Q9Y4H2.Y742.p_IRS2 Q9Y4H2_Y742y _1_1_742_742 Q9Y4H2 Q9Y4H2 Insulin receptor substrate 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8934.8977.2 28.89 28.89 2.515 6 1 1 0 990.4172 1899.8592 Y742y TMT10 729 (K) ASSPAESSPEDSGyMR (M) AS(0.0)S(0.0)PAES(0.0)S(0.0)PEDS(0.0)GY(0.99)MR y:Phosphorylated Y IRS2 138529.8 6 2 35.1 55.49 HUMAN 1 37.0046 54.7581 SSPEGNGSPEPKRPG-p Q9UN79;S83-p SSPEGNGSPEPKRPG 0.104709651653521 0.420826921348439 -0.320666666666667 -0.0813333333333333 20.6592626296256 5.003922200421 -0.320666666666667 -0.0813333333333333 0.008591593821883 0.315942303312745 -4.02188553129317 -1.10455342996758 Q9UN79 SOX13 Q9UN79.S83.p_SOX13 Q9UN79_S83s _1_1_83_83 Q9UN79 Q9UN79 Transcription factor SOX-13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10756.10756.5 20.71 20.29 2.35 7 1 1 0 789.1778 3861.8917 S83s TMT10 71 (R) GSWDCSSPEGNGsPEPKRPGVSEAASGSQEK (L) GS(0.0)WDCS(0.0)S(0.0)PEGNGS(0.99)PEPKRPGVS(0.0)EAAS(0.0)GS(0.0)QEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SOX13 69740.6 4 2 1036.1 185.73 HUMAN 1 -20.6593 -5.0039 SSPGATVSPSSSDAE-p Q8NI08-2;S179-p SSPGATVSPSSSDAE 0.676823734876953 0.946863597084931 0.056 -0.00966666666666663 3.17450672521844 0.338770521277212 0.0568230886586251 -0.00966666666666662 0.481447934095795 0.924959991142674 0.755639090123056 -0.0986509104474194 Q8NI08 NCOA7 Q8NI08.2.S179.p_NCOA7 Q8NI08-2_S179s _1_1_179_179 Q8NI08-2 Q8NI08|Q8NI08-2|Q8NI08-7|Q8NI08-3|Q8NI08-4 Isoform 2 of Nuclear receptor coactivator 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19200.19200.4 19.86 19.86 1.245 10 1 1 0 955.4916 3738.9641 S179s TMT10 169 (R) LSSSSPGATVsPSSSDAEYDKLPDADLARK (A) LS(0.0)S(0.0)S(0.0)S(0.0)PGAT(0.0)VS(0.99)PS(0.0)S(0.0)S(0.0)DAEY(0.0)DKLPDADLARK K:TMT10,s:Phosphorylated S NCOA7 105415.6 4 2 906.1 202.52 HUMAN 1 3.1745 -0.3388 SSPGGPGSRRSNYNL-p B7WPE2;S205-p SSPGGPGSRRSNYNL 0.736631418649438 0.0268857452889634 0.114333333333333 -0.286666666666667 2.5158724412846 21.3160388478093 0.114333333333333 -0.286666666666667 0.560289851094086 0.00738577571486317 0.620240337885278 -4.16302583281168 B7WPE2 EML3 B7WPE2.S205.p_EML3 B7WPE2_S205s _1_1_205_205 B7WPE2 Q32P44-2|B7WPE2|G3V1D0 Echinoderm microtubule associated protein like 3, isoform CRA_e HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7206.7206.3 8.98 4.84 2.112 3 1 1 0 688.3671 1983.1136 S205s TMT10 192 (R) GGKDPLSSPGGPGsRR (S) GGKDPLS(0.0)S(0.0)PGGPGS(0.99)RR K:TMT10,s:Phosphorylated S EML3 96366.1 2 7 1068.1 181 HUMAN 1 2.5159 -21.316 SSPGRQDSDEDDGPQ-p O95049-3;S131-p SSPGRQDSDEDDGPQ 0.94416726822779 0.465464455074469 0.0156666666666667 0.105333333333333 0.49237082910403 4.4288291697637 0.0156666666666667 0.105333333333333 0.892817958158977 0.360675865829795 0.141202340076149 0.998080628465203 O95049 TJP3 O95049.3.S131.p_TJP3 O95049-3_S131s _1_1_131_131 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7667.7877.4 22.83 15.28 3.327 4 1 1 0 806.359 3142.4471 S131s TMT10 121 (K) ASPSSPGRQDsDEDDGPQRVEEVDQGR (G) AS(0.0)PS(0.0)S(0.0)PGRQDS(0.99)DEDDGPQRVEEVDQGR s:Phosphorylated S TJP3 103593.6 3 1 125.1 544.41 HUMAN 1 0.4924 4.4288 SSPGSPGTPGSRSRT-p P10636;T522-p SSPGSPGTPGSRSRT 0.908751475442159 0.26219566260638 0.021 0.115333333333333 0.816902337857873 7.65961654655771 0.021 0.115333333333333 0.828532914934924 0.171410864533839 0.227297926498326 1.57557414710023 P10636 MAPT P10636.T522.p_MAPT P10636_T522t _1_1_522_522 P10636 P10636-9|A0A0G2JMX7|A0A0G2JS76|A0A0G2JPD5|A0A0G2JQJ7|P10636-8|P10636-7|P10636-5 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5645.5645.3 12.93 12.93 1.137 7 1 1 0 568.2606 1622.7972 T522t TMT10 512 (R) SGYSSPGSPGtPGSR (S) S(0.0)GY(0.0)S(0.0)S(0.0)PGS(0.0)PGT(0.99)PGS(0.0)R t:Phosphorylated T MAPT 79154.4 1 13 119.1 551.6 HUMAN 1 0.8169 7.6596 SSPHKEESPKKTKTE-p P51003;S660-p SSPHKEESPKKTKTE 0.108085133456159 0.0416536376235578 0.826333333333333 -0.553 20.3102245975078 18.5008504665026 0.826333333333333 -0.553 0.00931059724015376 0.0141226095850483 3.94584647921214 -3.56132818899741 P51003 PAPOLA P51003.S660.p_PAPOLA P51003_S660s _1_1_660_660 P51003 P51003|G3XAH6 Poly(A) polymerase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.3981.3981.4 9.68 6.15 4.475 4 1 1 0 588.5834 2271.3478 S660s TMT10 652 (R) TSSPHKEEsPKK (T) T(0.0)S(0.0)S(0.0)PHKEES(0.99)PKK K:TMT10,s:Phosphorylated S PAPOLA 83297.5 3 8 1658.1 123.25 HUMAN 1 20.3102 -18.5009 SSPKDCNSESEVTKE-p Q92628;S227-p SSPKDCNSESEVTKE 0.114688242267433 0.00843649951463868 -0.333666666666667 -0.477333333333333 19.5905615922638 29.451803837155 -0.333666666666667 -0.477333333333333 0.0109886373463965 0.00113453948811983 -3.79162624183113 -6.25737166942066 Q92628 KIAA0232 Q92628.S227.p_KIAA0232 Q92628_S227s _1_1_227_227 Q92628 Q92628 Uncharacterized protein KIAA0232 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11770.11770.5 17.68 17.68 1.119 18 1 1 0 859.7937 4214.9796 S227s TMT10 200 (K) VCSYSSSSSSSTAPPASTDTSSPKDCNsESEVTK (E) VCS(0.0)Y(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)T(0.0)APPAS(0.0)T(0.0)DT(0.0)S(0.0)S(0.0)PKDCNS(0.99)ES(0.0)EVT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIAA0232 157125.3 4 2 568.1 270.65 HUMAN 1 -19.5906 -29.4518 SSPLAPVSGEKRRPA-p Q9BU23;S670-p SSPLAPVSGEKRRPA 0.375455658906021 0.0173454724453883 0.120333333333333 -0.415666666666667 7.86904432006626 24.2902771818333 0.121104162394585 -0.415666666666667 0.163341134613008 0.00372367939679976 1.61243480881328 -4.86039948531357 Q9BU23 LMF2 Q9BU23.S670.p_LMF2 Q9BU23_S670s _1_1_670_670 Q9BU23 Q9BU23|Q9BU23-2 Lipase maturation factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14146.14146.2 11.74 11.74 5.812 3 1 1 0 805.4354 1529.8939 S670s TMT10 663 (R) SSPLAPVsGEK (R) S(0.0)S(0.0)PLAPVS(0.99)GEK K:TMT10,s:Phosphorylated S LMF2 79981.6 1 1 4431.1 31.5 HUMAN 1 7.869 -24.2903 SSPLHSRSIAAELDE-p H3BU86;S41-p SSPLHSRSIAAELDE 0.513028313007953 0.842193272973508 -0.203333333333333 -0.056 5.3577053651067 1.0480456165121 -0.203333333333333 -0.056 0.291225542861788 0.785589080711982 -1.16922424977886 -0.285858778892268 H3BU86 NotFound H3BU86.S41.p_NotFound H3BU86_S41s _1_1_41_41 H3BU86 H3BU86 STX16-NPEPL1 readthrough (NMD candidate) HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28043.28043.3 19.4 19.4 99 1 1 1 0 576.2739 1646.8435 S41s TMT10 41 (R) sIAAELDELADDR (M) S(1.0)IAAELDELADDR s:Phosphorylated S STX16-NPEPL1 43684.8 1 3 1109.2 176.13 HUMAN 1 -5.3577 -1.048 SSPLIQLSPEADKEN-p Q9NYZ3;S705-p SSPLIQLSPEADKEN 0.791366843282806 0.00885809255924247 -0.0443333333333333 -0.428 1.96270089895775 29.0872489281629 -0.0443333333333333 -0.428 0.63639961772984 0.00123388620043608 -0.50052595140221 -6.14979333780924 Q9NYZ3 GTSE1 Q9NYZ3.S705.p_GTSE1 Q9NYZ3_S705s _1_1_705_705 Q9NYZ3 Q9NYZ3 G2 and S phase-expressed protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37025.37025.5 26.62 26.62 1.396 5 1 1 0 1011.772 4974.8577 S705s TMT10 683 (K) NVAKPSPVVGQLIDLSSPLIQLsPEADKENVDSPLLKF (-) NVAKPS(0.0)PVVGQLIDLS(0.0)S(0.0)PLIQLS(0.99)PEADKENVDS(0.0)PLLKF K:TMT10,s:Phosphorylated S GTSE1 77156.9 8 16 271.1 394.28 HUMAN 1 -1.9627 -29.0872 SSPLSPLSPGIKSPT-p Q9P2B4;S563-p SSPLSPLSPGIKSPT 0.0700237545877012 0.0488552441462146 -0.380333333333333 -0.294666666666667 24.9124965047097 17.5370524027867 -0.380333333333333 -0.294666666666667 0.00322663878277493 0.0176317232192756 -5.02164891622742 -3.36650490355801 Q9P2B4 CTTNBP2NL Q9P2B4.S563.p_CTTNBP2NL Q9P2B4_S563sS568s_2_2_563_568 Q9P2B4 Q9P2B4 CTTNBP2 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25837.25837.3 10.62 10.62 1.56 6 2 2 0 851.1274 2391.4376 S563s S568s TMT10 555 (K) VSSPLSPLsPGIKsPTIPR (A) VS(0.0)S(0.0)PLS(0.0)PLS(0.99)PGIKS(0.99)PT(0.0)IPR K:TMT10,s:Phosphorylated S CTTNBP2NL 70613.2 6 13 1031.1 186 HUMAN 1 -24.9125 -17.5371 SSPLTSPTNTSQNTL-p E3W994;T892-p SSPLTSPTNTSQNTL 0.886027178849554 0.332281206534445 -0.0216666666666667 -0.101666666666667 1.03077680070387 6.3399819645377 -0.0216666666666667 -0.101666666666667 0.788719030793751 0.232274644228186 -0.281580746095505 -1.34457326266247 E3W994 NotFound E3W994.T892.p_NotFound E3W994_T892t_1_1_892_892 E3W994 O75122-3|E3W994|E7EW49|E7ERI8|A0A0U1RQI6|J3KR49 CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31533.31533.4 22.12 22.12 0 17 1 1 0 1238.558 4854.2162 T892t N910n M911m TMT10 880 (R) SPANWSSPLTSPtNTSQNTLSPSAFDYDTEnmNSEDIYSSLR (G) S(0.0)PAN(0.0)WS(0.0)S(0.0)PLT(0.0)S(0.0)PT(0.99)N(0.33)T(0.0)S(0.0)QN(0.33)T(0.0)LS(0.0)PS(0.0)AFDY(0.0)DT(0.0)EN(0.33)M(1.0)N(0.0)S(0.0)EDIY(0.0)S(0.0)S(0.0)LR t:Phosphorylated T,n:Deamidated,m:Oxidized methionine CLASP2 139660.6 7 22 158.1 498.15 HUMAN 1 -1.0308 -6.34 SSPQKCPSPINEHNG-p Q9Y2H6;S213-p SSPQKCPSPINEHNG 0.269424134699647 0.0203187482224622 -0.266 0.337666666666667 10.7977046379535 23.1704009159489 -0.266 0.337666666666667 0.0832203496609584 0.00481903309000841 -2.1207053943101 4.58963632177207 Q9Y2H6 FNDC3A Q9Y2H6.S213.p_FNDC3A Q9Y2H6_S213s_1_1_213_213 Q9Y2H6 Q9Y2H6|Q9Y2H6-2 Fibronectin type-III domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15368.15368.4 18 14.36 4.359 5 1 1 0 819.1714 3192.7113 S213s N219n TMT10 201 (K) MSSPPSSPQKCPsPINEHnGLIK (G) MS(0.0)S(0.0)PPS(0.0)S(0.0)PQKCPS(0.99)PIN(0.0)EHN(0.99)GLIK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated FNDC3A 133846.1 6 2 2471.1 82 HUMAN 1 -10.7977 23.1704 SSPQRGGSPPWAANS-p Q15746;S305-p SSPQRGGSPPWAANS 0.524451861742397 0.0240845968590527 0.120333333333333 -0.335 5.18569678880122 22.052757593457 0.120333333333333 -0.335 0.302991413466688 0.00623338914921339 1.13798167882705 -4.32941167699123 Q15746 MYLK Q15746.S305.p_MYLK Q15746_S305s _1_1_305_305 Q15746 Q15746|Q15746-6|Q15746-3|Q15746-2|Q15746-5|Q15746-4 Myosin light chain kinase, smooth muscle HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13568.13568.3 8.33 8.33 6.918 2 1 1 0 652.6507 1875.9663 S305s TMT10 303 (R) GGsPPWAANSQPQPPR (E) GGS(0.99)PPWAANS(0.0)QPQPPR s:Phosphorylated S MYLK 213449.8 1 1 4738.1 27.26 HUMAN 1 5.1857 -22.0528 SSPQRRQSPSPSTRP-p A9Z1X7;S722-p SSPQRRQSPSPSTRP 0.173995878042497 0.0819423589566321 0.288666666666667 0.348 15.1247558011448 14.40163172998 0.288666666666667 0.348 0.030727301365361 0.0362941664811451 2.90188214326067 2.76524495577556 A9Z1X7 NotFound A9Z1X7.S722.p_NotFound A9Z1X7_S722s _1_1_722_722 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3447.3447.3 13.84 13.84 1.771 4 1 1 0 487.9153 1381.7659 S722s Hydrogen 720 (R) RQsPSPSTRPIR (R) RQS(0.99)PS(0.0)PS(0.0)T(0.0)RPIR s:Phosphorylated S SRRM1 103445.7 38 41 8.1 1346.57 HUMAN 1 15.1248 14.4016 SSPRSHLSPEQGTGI-p Q96BR9;S167-p SSPRSHLSPEQGTGI 0.672241505531243 0.0529773882018352 -0.0586666666666667 -0.239666666666667 3.22994534744143 17.0152206036422 -0.0586666666666667 -0.239666666666667 0.475341207701915 0.0198828181133554 -0.766742055049076 -3.26314396801918 Q96BR9 ZBTB8A Q96BR9.S167.p_ZBTB8A Q96BR9_S167s _1_1_167_167 Q96BR9 Q96BR9|D3DPQ1|Q96BR9-2 Zinc finger and BTB domain-containing protein 8A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14279.14279.3 14.88 14.88 1.22 4 1 1 0 683.6986 1969.1119 S167s TMT10 164 (R) SHLsPEQGTGIISGK (S) S(0.0)HLS(0.99)PEQGT(0.0)GIIS(0.0)GK K:TMT10,s:Phosphorylated S ZBTB8A 50881.8 2 2 4548.1 30 HUMAN 1 -3.2299 -17.0152 SSPSIPGTPTLKMWG-p Q9H4Z3;T150-p SSPSIPGTPTLKMWG 0.126572282263763 0.48921246764937 0.347 0.119 18.6327372993439 4.1502921424886 0.347 0.119 0.013700179901823 0.38456591208244 3.59147040377677 0.945586637176125 Q9H4Z3 PCIF1 Q9H4Z3.T150.p_PCIF1 Q9H4Z3_T150t _1_1_150_150 Q9H4Z3 Q9H4Z3 Phosphorylated CTD-interacting factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29203.29203.4 15.97 15.97 3.539 8 1 1 0 761.1694 2961.6913 T150t TMT10 130 (K) IEIPVTPTGQSVPSSPSIPGtPTLK (M) IEIPVT(0.0)PT(0.0)GQS(0.0)VPS(0.0)S(0.0)PS(0.0)IPGT(0.99)PT(0.0)LK K:TMT10,t:Phosphorylated T PCIF1 81581.1 1 5 1892.1 108.77 HUMAN 1 18.6327 4.1503 SSPSLAFTPPIKTLG-p Q8NFH5;T265-p SSPSLAFTPPIKTLG 0.599491456225614 0.0913069332801081 0.0736666666666667 -0.21 4.10578861950012 13.7475248789911 0.0736666666666667 -0.21 0.388526940359268 0.0421936904216705 0.937297930242132 -2.64512735432421 Q8NFH5 NUP35 Q8NFH5.T265.p_NUP35 Q8NFH5_T265t _1_1_265_265 Q8NFH5 Q8NFH5|Q8NFH5-2|Q8NFH5-3 Nucleoporin NUP53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27404.27612.3 21 21 4.095 4 1 1 0 709.7164 2047.1662 T265t TMT10 255 (R) CALSSPSLAFtPPIK (T) CALS(0.0)S(0.0)PS(0.0)LAFT(0.99)PPIK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T NUP35 34887.3 6 12 627.1 257.69 HUMAN 1 4.1058 -13.7475 SSPSSSPSPKGFRKK-p Q6WKZ4;S345-p SSPSSSPSPKGFRKK 0.217253177036105 0.125314238130395 0.423 -0.241 12.7729982547829 11.8934861933186 0.423 -0.241 0.0528080552987428 0.0646623346197833 2.47024175493451 -2.3123144457986 Q6WKZ4 RAB11FIP1 Q6WKZ4.S345.p_RAB11FIP1 Q6WKZ4_S345s _1_1_345_345 Q6WKZ4 Q6WKZ4|Q6WKZ4-3|E7EX40|Q6WKZ4-2 Rab11 family-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15108.15108.4 17.38 17.38 1.124 8 1 1 0 1138.8378 4472.3537 S345s TMT10 315 (R) SNVCINGNHVYLEQPEAKGEIKDSSPSSSPsPK (G) S(0.0)NVCINGNHVY(0.0)LEQPEAKGEIKDS(0.0)S(0.0)PS(0.0)S(0.0)S(0.0)PS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RAB11FIP1 137564.1 9 7 56.1 721.17 HUMAN 1 12.773 -11.8935 SSPSSSPSPQPVSEL-p Q9BX40-3;S43-p SSPSSSPSPQPVSEL 0.80012376994327 0.10390168566544 -0.0486666666666667 -0.183 1.8664151074948 12.9916867791748 -0.0486666666666667 -0.183 0.650666562749723 0.0502147519927071 -0.479011183671458 -2.50819393658615 Q9BX40 LSM14B Q9BX40.3.S43.p_LSM14B Q9BX40-3_S43s _1_1_43_43 Q9BX40-3 Q9BX40-2|Q9BX40-3|A0A0C4DFV2 Isoform 3 of Protein LSM14 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27278.27278.3 26.2 26.2 1.822 12 1 1 0 1396.0476 4106.1545 S43s TMT10 26 (K) LVSPPASAAASSPSSSPsPQPVSELDLSSEPQQLTAK (G) LVS(0.0)PPAS(0.0)AAAS(0.0)S(0.0)PS(0.0)S(0.0)S(0.0)PS(0.99)PQPVS(0.0)ELDLS(0.0)S(0.0)EPQQLT(0.0)AK K:TMT10,s:Phosphorylated S LSM14B 26132.8 1 11 1596.2 128.9 HUMAN 1 -1.8664 -12.9917 SSPTAPLSPMSPPGY-p P17302;S279-p SSPTAPLSPMSPPGY 0.94478758147709 0.021404944462919 0.0133333333333333 -0.394666666666667 0.484763756992828 22.8284306794637 0.0133333333333333 -0.394666666666667 0.894383182337906 0.00521383078536206 0.139124383603582 -4.50898394322701 P17302 GJA1 P17302.S279.p_GJA1 P17302_S279s _1_1_279_279 P17302 P17302 Gap junction alpha-1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25553.25553.3 22.47 19.43 2.855 8 1 1 0 1010.8113 2950.452 S279s TMT10 265 (K) YAYFNGCSSPTAPLsPMSPPGYK (L) Y(0.0)AY(0.0)FNGCS(0.0)S(0.0)PT(0.0)APLS(0.99)PMS(0.0)PPGY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GJA1 43521.1 1 2 1330.1 153.26 HUMAN 1 0.4848 -22.8284 SSPTPPCSPVQPSKQ-p Q9NUL3;S492-p SSPTPPCSPVQPSKQ 0.177952626351024 0.00197175202794993 -0.349666666666667 -0.837666666666667 14.8370093771499 42.2566376388996 -0.349666666666667 -0.837666666666667 0.0328321302707397 5.94752445044351e-05 -2.84793767795791 -11.1944501334509 Q9NUL3 STAU2 Q9NUL3.S492.p_STAU2 Q9NUL3_S492s _1_1_492_492 Q9NUL3 Q9NUL3|A0A0A0MTC5|Q9NUL3-2|E9PH62|E7EVJ4|A0A0A0MTD1|Q9NUL3-6|A0A0A0MTC4|Q9NUL3-4|G5EA18 Double-stranded RNA-binding protein Staufen homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9969.9969.2 14.61 14.61 2.701 5 1 1 0 1032.5152 1984.0574 S492s TMT10 484 (K) GSSPTPPCsPVQPSK (Q) GS(0.0)S(0.0)PT(0.0)PPCS(0.99)PVQPS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S STAU2 62867.6 2 10 1170.1 170.28 HUMAN 1 -14.837 -42.2566 SSPTRERSPSPSFRW-p P49585;S329-p SSPTRERSPSPSFRW 0.792632612057571 0.112807466687543 -0.037 0.277333333333333 1.94655625801945 12.4983229169702 -0.037 0.277333333333333 0.638769798506948 0.0562558522334191 -0.496933741015166 2.41978120452373 P49585 PCYT1A P49585.S329.p_PCYT1A P49585_S329s _1_1_329_329 P49585 C9JEJ2|P49585 Choline-phosphate cytidylyltransferase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4016.4016.2 15.17 9.01 5.787 3 1 1 0 571.7537 1062.5327 S329s Hydrogen 327 (R) ERsPSPSFR (W) ERS(0.99)PS(0.0)PS(0.0)FR s:Phosphorylated S PCYT1A 42072.6 14 7 694.1 242.25 HUMAN 1 -1.9466 12.4983 SSPVCMDSFQPMDDS-p Q3T8J9-3;S482-p SSPVCMDSFQPMDDS 0.249209007658047 0.367834119016294 0.171666666666667 0.0913333333333334 11.5133117849615 5.76009548760437 0.171666666666667 0.0913333333333334 0.0705779145351251 0.265454719624685 2.24629494296835 1.24142186788307 Q3T8J9 GON4L Q3T8J9.3.S482.p_GON4L Q3T8J9-3_S482s_1_1_482_482 Q3T8J9-3 Q3T8J9|Q3T8J9-3 Isoform 3 of GON-4-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26424.26424.4 21.97 21.97 1.473 4 1 1 0 902.1673 3509.6588 M480m S482s TMT10 466 (K) LHAVDEELASSPVCmDsFQPMDDSLIAFR (T) LHAVDEELAS(0.0)S(0.0)PVCM(0.99)DS(0.99)FQPM(0.0)DDS(0.0)LIAFR C:Carbamidomethylation,m:Oxidized methionine,s:Phosphorylated S GON4L 250541.8 1 9 291.1 381.52 HUMAN 1 11.5133 5.7601 SSPVVHQSLQEVSEP-p Q15678;S620-p SSPVVHQSLQEVSEP 0.354909532906257 0.0683654163750635 0.25 0.227333333333333 8.3595926519416 15.5023180278133 0.25 0.227333333333333 0.145895109669645 0.0281687903307987 1.69749006557405 2.97118401838428 Q15678 PTPN14 Q15678.S620.p_PTPN14 Q15678_S620s _1_1_620_620 Q15678 Q15678 Tyrosine-protein phosphatase non-receptor type 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20613.20613.3 22.01 22.01 3.823 7 1 1 0 1099.2178 3215.6836 S620s TMT10 608 (K) TFQEDSSPVVHQsLQEVSEPLTATK (H) T(0.0)FQEDS(0.0)S(0.0)PVVHQS(0.99)LQEVS(0.0)EPLT(0.0)AT(0.0)K K:TMT10,s:Phosphorylated S PTPN14 136114.4 4 12 337.1 355.06 HUMAN 1 8.3596 15.5023 SSPWGESSPEELRFG-p Q6PJI9;S822-p SSPWGESSPEELRFG 0.504670395998139 0.545197337191569 0.093 -0.066 5.48446732672384 3.54303288603197 0.093 -0.066 0.28284810101943 0.442279399636908 1.19214515042905 -0.828576911546699 Q6PJI9 WDR59 Q6PJI9.S822.p_WDR59 Q6PJI9_S821sS822s_2_2_821_822 Q6PJI9 Q6PJI9|Q6PJI9-3|Q6PJI9-4 GATOR complex protein WDR59 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19088.19088.3 14.16 14.16 2.225 4 2 2 0 810.3451 2269.0934 S821s S822s TMT10 810 (R) EAEHLSSPWGEssPEELR (F) EAEHLS(0.0)S(0.0)PWGES(0.99)S(0.99)PEELR s:Phosphorylated S WDR59 111502.9 1 6 1731.1 118.79 HUMAN 1 5.4845 -3.543 SSQETHDSPFCLRKQ-p Q8TB45;S244-p SSQETHDSPFCLRKQ 0.91995668172231 0.0350177201412657 0.0306666666666667 0.35 0.707584925993533 19.5996877680755 0.0306666666666667 0.35 0.849652828268667 0.0109655702924345 0.198830159729415 3.79010457524919 Q8TB45 DEPTOR Q8TB45.S244.p_DEPTOR Q8TB45_S244s _1_1_244_244 Q8TB45 Q8TB45|Q8TB45-2 DEP domain-containing mTOR-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11304.11304.3 8.12 8.12 2.691 5 1 1 0 686.3024 1976.9334 S244s TMT10 235 (K) SPSSQETHDsPFCLR (K) S(0.0)PS(0.0)S(0.0)QET(0.0)HDS(0.99)PFCLR C:Carbamidomethylation,s:Phosphorylated S DEPTOR 46806.5 1 5 1526.1 133.99 HUMAN 1 0.7076 19.5997 SSQFLQKSPLPTKRG-p Q96FZ2;S322-p SSQFLQKSPLPTKRG 0.567134370073272 0.011435776983551 0.156666666666667 -1.20133333333333 4.53859388608227 27.17488390496 0.156666666666667 -1.20133333333333 0.351674283573231 0.00191651229400973 1.01878064574115 -5.60874133772571 Q96FZ2 HMCES Q96FZ2.S322.p_HMCES Q96FZ2_S322s _1_1_322_322 Q96FZ2 Q96FZ2|E7EMP6 Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21767.21767.5 14.6 13.67 1.588 7 1 1 0 914.8954 4490.4792 S322s TMT10 299 (K) EDSKTPQKEESDVPQWSSQFLQKsPLPTK (R) EDS(0.0)KT(0.0)PQKEES(0.0)DVPQWS(0.0)S(0.0)QFLQKS(0.99)PLPT(0.0)K K:TMT10,s:Phosphorylated S HMCES 41144.7 2 4 1621.1 126.89 HUMAN 1 4.5386 -27.1749 SSQIIHISDENEGKE-p Q6PL18;S1283-p SSQIIHISDENEGKE 0.256105749737423 0.00138078039709077 -0.183666666666667 -0.944333333333333 11.2356588550628 46.3638503158562 -0.183666666666667 -0.944333333333333 0.0752374581036204 2.31001589591948e-05 -2.1974473182445 -13.4006011838692 Q6PL18 ATAD2 Q6PL18.S1283.p_ATAD2 Q6PL18_S1283s _1_1_1283_1283 Q6PL18 Q6PL18|A0A0B4J211 ATPase family AAA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16598.16598.3 22.94 22.94 7.304 4 1 1 0 961.789 2803.3933 S1283s TMT10 1268 (K) IACNGDASSSQIIHIsDENEGK (E) IACNGDAS(0.0)S(0.0)S(0.0)QIIHIS(0.99)DENEGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATAD2 159920.6 3 20 266.1 395.28 HUMAN 1 -11.2357 -46.3639 SSQLHENSGSPETSR-p O43353;S355-p SSQLHENSGSPETSR 0.456411337786712 0.809268119506122 -0.103 0.0283333333333334 6.27951799575375 1.28781902093928 -0.103 0.0283333333333334 0.235531067490992 0.74339236763322 -1.33420845848141 0.344558752368624 O43353 RIPK2 O43353.S355.p_RIPK2 O43353_S355s_1_1_355_355 O43353 O43353|O43353-2 Receptor-interacting serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15370.15370.5 8.29 8.29 8.288 8 1 1 0 947.2679 4651.3448 N354n S355s TMT10 327 (K) KKMELSLNIPVNHGPQEESCGSSQLHEnsGSPETSR (S) KKMELS(0.0)LN(0.0)IPVN(0.0)HGPQEES(0.0)CGS(0.0)S(0.0)QLHEN(0.99)S(0.99)GS(0.0)PET(0.0)S(0.0)R K:TMT10,C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S RIPK2 61764.4 1 4 1914.1 107.79 HUMAN 1 -6.2795 1.2878 SSQLKNLSELQDTSL-p Q5QJE6;S324-p SSQLKNLSELQDTSL 0.628647939920457 0.756036718889476 0.0793333333333333 -0.0393333333333333 3.7467944956338 1.6803548532106 0.0793333333333333 -0.0393333333333333 0.422007870259564 0.679148138533454 0.86840876855596 -0.436742268782807 Q5QJE6 DNTTIP2 Q5QJE6.S324.p_DNTTIP2 Q5QJE6_S324s _1_1_324_324 Q5QJE6 Q5QJE6|J3KP30 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28618.28618.3 17.3 17.3 3.648 4 1 1 0 756.7243 2188.1771 S324s TMT10 322 (K) NLsELQDTSLQQLVSQR (H) NLS(0.99)ELQDT(0.0)S(0.0)LQQLVS(0.0)QR s:Phosphorylated S DNTTIP2 84866.9 1 12 448.1 309.47 HUMAN 1 3.7468 -1.6804 SSQNRTRSFGHFPGP-p Q1RLN5;S176-p SSQNRTRSFGHFPGP 0.723080534443345 0.0903585580040383 -0.0516666666666667 -0.226666666666667 2.6635486801577 13.8116837581327 -0.0516666666666667 -0.226666666666667 0.541558194883729 0.0415749393354966 -0.651205661374999 -2.65684013119172 Q1RLN5 ARHGAP12 Q1RLN5.S176.p_ARHGAP12 Q1RLN5_S176s _1_1_176_176 Q1RLN5 Q8IWW6|Q8IWW6-4|Q8IWW6-2|Q1RLN5|Q8IWW6-3 ARHGAP12 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26447.26447.3 14.11 12.26 99 1 1 1 0 672.3215 1934.985 S176s Hydrogen 176 (R) sFGHFPGPEFLDVEK (T) S(1.0)FGHFPGPEFLDVEK K:TMT10-Lys-Only,s:Phosphorylated S ARHGAP12 91157.4 2 3 974.1 193.01 HUMAN 1 -2.6635 -13.8117 SSQNRYFSEADKIKV-p P12268;S432-p SSQNRYFSEADKIKV 0.217126583342706 0.00348121522294534 0.620666666666667 -0.866 12.7796163364927 36.7465196765805 0.620666666666667 -0.866 0.0527276439908468 0.000211518341399983 2.47142977111545 -8.75995938076363 P12268 IMPDH2 P12268.S432.p_IMPDH2 P12268_S432s _1_1_432_432 P12268 P12268 Inosine-5'-monophosphate dehydrogenase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18048.18048.3 13.58 13.58 8.196 2 1 1 0 623.3438 1788.051 S432s TMT10 430 (R) YFsEADKIK (V) Y(0.0)FS(0.99)EADKIK K:TMT10,s:Phosphorylated S IMPDH2 56260.4 1 6 1929.1 106.46 HUMAN 1 12.7796 -36.7465 SSQPLDESWPRQQPP-p Q6UUV7;S135-p SSQPLDESWPRQQPP 0.932098009206702 0.0808143050010431 -0.018 -0.193666666666667 0.605746947597193 14.4896707899579 -0.018 -0.193666666666667 0.869811820359805 0.0355658277658675 -0.1718336843274 -2.78153534606163 Q6UUV7 CRTC3 Q6UUV7.S135.p_CRTC3 Q6UUV7_S135s _1_1_135_135 Q6UUV7 Q6UUV7|Q6UUV7-3 CREB-regulated transcription coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24896.24896.3 22.43 22.43 1.15 5 1 1 0 923.4092 2688.2528 S135s TMT10 117 (R) QFDGSAFGANYSSQPLDEsWPR (Q) QFDGS(0.0)AFGANY(0.0)S(0.0)S(0.0)QPLDES(0.99)WPR s:Phosphorylated S CRTC3 67129.2 2 2 1297.1 156.77 HUMAN 1 -0.6057 -14.4897 SSQQRQDSLSSEVDT-p Q08378;S465-p SSQQRQDSLSSEVDT 0.10016029384893 0.223147181852447 -0.358666666666667 -0.124666666666667 21.1409795483343 8.58026309697669 -0.358666666666667 -0.124666666666667 0.00768956982986338 0.138667182130789 -4.12820882767134 -1.73511108636483 Q08378 GOLGA3 Q08378.S465.p_GOLGA3 Q08378_S465s _1_1_465_465 Q08378 Q08378-2|Q08378-4 Golgin subfamily A member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17996.17996.2 10.14 10.14 2.136 4 1 1 0 815.8915 1550.8111 S465s Hydrogen 463 (R) QDsLSSEVDTLK (Q) QDS(0.99)LS(0.0)S(0.0)EVDT(0.0)LK K:TMT10-Lys-Only,s:Phosphorylated S GOLGA3 167865.2 3 10 515.1 286.2 HUMAN 1 -21.141 -8.5803 SSQRKRMSPKPELTE-p P41208;S20-p SSQRKRMSPKPELTE 0.847544117529098 0.0131822884002457 -0.0356666666666667 0.465333333333333 1.39229925984562 26.1824173110586 -0.0356666666666667 0.465333333333333 0.725721641151928 0.00240856443304116 -0.369580599725666 5.34253331978017 P41208 CETN2 P41208.S20.p_CETN2 P41208_S20s _1_1_20_20 P41208 P41208 Centrin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30297.30297.5 17.48 10.99 1.324 4 1 1 0 978.9125 4810.5743 S20s TMT10 18 (K) RMsPKPELTEEQKQEIREAFDLFDADGTGTIDVK (E) RMS(0.99)PKPELT(0.0)EEQKQEIREAFDLFDADGT(0.0)GT(0.0)IDVK K:TMT10,s:Phosphorylated S CETN2 19738.1 23 1 2832.1 68.66 HUMAN 1 -1.3923 26.1824 SSQSPGRSPRLPRSP-p X6RLX0;S21-p SSQSPGRSPRLPRSP 0.757518629145736 0.229357420268204 -0.047 -0.129666666666667 2.30950689688585 8.42484451840039 -0.047 -0.129666666666667 0.587556060555781 0.143719450538031 -0.576303674854817 -1.70821975664962 X6RLX0 ERC1 X6RLX0.S21.p_ERC1 X6RLX0_S21s _1_1_21_21 X6RLX0 X6RLX0|Q8IUD2|Q8IUD2-3|G8JLD3|Q8IUD2-2|X6RM00|Q8IUD2-4|Q8IUD2-5 ELKS/Rab6-interacting/CAST family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7803.7803.5 14.95 14.95 2.199 5 1 1 0 532.6952 2579.4782 S21s TMT10 7 (R) SVGKVEPSSQSPGRsPRLPR (S) S(0.0)VGKVEPS(0.0)S(0.0)QS(0.0)PGRS(0.99)PRLPR K:TMT10,s:Phosphorylated S ERC1 128700.8 3 3 904.1 203.11 HUMAN 1 -2.3095 -8.4248 SSQTEIGSLNSKGSL-p Q6VY07-2;S417-p SSQTEIGSLNSKGSL 0.024620877646584 0.0086777312522388 -0.713666666666667 -0.484 37.2703529567118 29.2449747162075 -0.713666666666667 -0.484 0.000187484213104397 0.00118987825638307 -8.98776183105964 -6.19615696355454 Q6VY07 PACS1 Q6VY07.2.S417.p_PACS1 Q6VY07-2_S417s _1_1_417_417 Q6VY07-2 Q6VY07-2 Isoform 2 of Phosphofurin acidic cluster sorting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.26005.26005.4 21.8 21.8 2.434 7 1 1 0 818.1736 3189.7069 S417s TMT10 399 (K) LKPFFEGMSQSSSQTEIGsLNSK (G) LKPFFEGMS(0.0)QS(0.0)S(0.0)S(0.0)QT(0.0)EIGS(0.99)LNS(0.0)K K:TMT10,s:Phosphorylated S PACS1 109968.1 4 5 786.1 225.23 HUMAN 1 -37.2704 -29.245 SSQTQSPTPPKPPSP-p Q92615;T518-p SSQTQSPTPPKPPSP 0.143512317432181 0.0377441248033823 0.477333333333333 0.327333333333333 17.2311556493761 19.1195880362841 0.477333333333333 0.327333333333333 0.0189184013658933 0.0122473236960328 3.30830244872215 3.68924022952959 Q92615 LARP4B Q92615.T518.p_LARP4B Q92615_T518t _1_1_518_518 Q92615 Q92615 La-related protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33488.33488.5 28.32 20.78 1.528 11 1 1 0 1108.5803 5458.8778 T518t TMT10 509 (K) FTSSQTQSPtPPKPPSPSFELGLSSFPPLPGAAGNLKTEDLFENR (L) FT(0.0)S(0.0)S(0.0)QT(0.0)QS(0.0)PT(0.99)PPKPPS(0.0)PS(0.0)FELGLS(0.0)S(0.0)FPPLPGAAGNLKT(0.0)EDLFENR K:TMT10,t:Phosphorylated T LARP4B 80949.9 3 5 332.1 357.69 HUMAN 1 17.2312 19.1196 SSRAPALSPTRPPKK-p O94875-12;S364-p SSRAPALSPTRPPKK 0.604702941950129 0.00391022233903977 -0.139 0.713 4.03572252240017 35.5174514550241 -0.139 0.713 0.394846004566489 0.000280708041734721 -0.92395186204624 8.28666946930053 O94875 SORBS2 O94875.12.S364.p_SORBS2 O94875-12_S364s _1_1_364_364 O94875-12 O94875-10|O94875-12 Isoform 12 of Sorbin and SH3 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11708.11708.4 9.14 9.14 2.584 2 1 1 0 418.9939 1592.9888 S364s TMT10 360 (R) APALsPTRPPK (K) APALS(0.99)PT(0.0)RPPK K:TMT10,s:Phosphorylated S SORBS2 81021.6 2 7 962.1 194.05 HUMAN 1 -4.0357 35.5175 SSRDLHGSQGSLALS-p Q96RT1-8;S1239-p SSRDLHGSQGSLALS 0.991351922008534 0.0605387234370184 0.00199999999999999 -0.293333333333333 0.079121208050131 16.2244418928675 0.00199999999999999 -0.293333333333333 0.98194661915326 0.0238537031712385 0.0236930653057205 -3.10916971212803 Q96RT1 ERBB2IP Q96RT1.8.S1239.p_ERBB2IP Q96RT1-8_S1239s _1_1_1239_1239 Q96RT1-8 Q96RT1-8|B4DIP2 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14868.14868.3 15.45 15.45 2.544 3 1 1 0 645.6566 1854.9871 S1239s TMT10 1235 (R) DLHGsQGSLALSVADR (R) DLHGS(0.99)QGS(0.0)LALS(0.0)VADR s:Phosphorylated S ERBIN 159762.8 2 26 81.1 633.5 HUMAN 1 0.0791 -16.2244 SSRDSHLSNGLDPVA-p O14523;S502-p SSRDSHLSNGLDPVA 0.243578769364305 0.0660552348883398 -0.202333333333333 -0.228333333333333 11.7289905182775 15.6964669852354 -0.202333333333333 -0.228333333333333 0.0671584939167729 0.026937252764195 -2.28435528196347 -3.00804764345755 O14523 C2CD2L O14523.S502.p_C2CD2L O14523_S502s _1_1_502_502 O14523 O14523|E9PK05 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17558.17558.3 19.33 19.33 3.333 3 1 1 0 702.0139 2024.061 S502s TMT10 498 (R) DSHLsNGLDPVAETAIR (Q) DS(0.0)HLS(0.99)NGLDPVAET(0.0)AIR s:Phosphorylated S C2CD2L 76636.4 2 12 411.1 322.51 HUMAN 1 -11.729 -15.6965 SSRDVQGTDASLDEE-p Q9UJZ1;T342-p SSRDVQGTDASLDEE 0.425033318045053 0.171834089513715 0.144 0.143333333333333 6.84631374981547 10.0555850228461 0.144 0.143333333333333 0.206713397501588 0.0987282633412272 1.43408351463604 1.99055914881656 Q9UJZ1 STOML2 Q9UJZ1.T342.p_STOML2 Q9UJZ1_T342t _1_1_342_342 Q9UJZ1 Q9UJZ1 Stomatin-like protein 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18587.18587.3 11.17 11.17 4.779 2 1 1 0 733.6842 2119.0716 T342t Hydrogen 338 (R) DVQGtDASLDEELDRVK (M) DVQGT(0.99)DAS(0.0)LDEELDRVK K:TMT10-Lys-Only,t:Phosphorylated T STOML2 38647.5 2 4 3350.1 53.17 HUMAN 1 6.8463 10.0556 SSREIGQSVDEVEKL-p A0A087WUZ3;S2050-p SSREIGQSVDEVEKL 0.335984361418148 0.0235986321445072 0.169 0.323 8.83473486373244 22.1855025571448 0.169 0.323 0.130775537479417 0.00604574387122171 1.77975512645799 4.35981782227636 A0A087WUZ3 NotFound A0A087WUZ3.S2050.p_NotFound A0A087WUZ3_S2050s _1_1_2050_2050 A0A087WUZ3 A0A087WUZ3|Q01082|Q01082-2|Q01082-3 Spectrin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14652.14652.3 10.45 10.45 99 1 1 1 0 590.9686 1690.9264 S2050s TMT10 2046 (R) EIGQsVDEVEK (L) EIGQS(1.0)VDEVEK K:TMT10,s:Phosphorylated S SPTBN1 275623.3 1 9 233.1 420.49 HUMAN 1 8.8347 22.1855 SSRERRRSFLESNYF-p O60293;S1046-p SSRERRRSFLESNYF 0.019376665224519 0.0097761557837634 -0.872666666666667 -0.485666666666667 39.9660086640254 28.2910841270556 -0.872666666666667 -0.485666666666667 0.0001007857503772 0.00148214805111532 -10.1394899182567 -5.9198813682398 O60293 ZFC3H1 O60293.S1046.p_ZFC3H1 O60293_S1046s _1_1_1046_1046 O60293 O60293|O60293-2 Zinc finger C3H1 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22764.22764.3 19.13 19.13 6.948 4 1 1 0 742.727 2146.1949 S1046s Hydrogen 1046 (R) sFLESNYFTKPNLK (H) S(0.99)FLES(0.0)NY(0.0)FT(0.0)KPNLK K:TMT10-Lys-Only,s:Phosphorylated S ZFC3H1 228291.3 12 17 311.1 371.67 HUMAN 1 -39.966 -28.2911 SSRFEGLSPLQRHRL-p Q9Y3E2;S81-p SSRFEGLSPLQRHRL 0.986625341798263 0.0159687474040441 0.00266666666666666 0.402666666666667 0.119533464017741 24.824466102731 0.00266666666666666 0.402666666666667 0.972851725670716 0.00329270929566028 0.035634090239012 4.99328109584474 Q9Y3E2 BOLA1 Q9Y3E2.S81.p_BOLA1 Q9Y3E2_S81s _1_1_81_81 Q9Y3E2 Q9Y3E2 BolA-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21002.21002.3 15.44 15.44 4.953 3 1 1 0 685.371 1974.1334 S81s TMT10 70 (R) VAVVSSRFEGLsPLQR (H) VAVVS(0.0)S(0.0)RFEGLS(0.99)PLQR s:Phosphorylated S BOLA1 14460.3 7 1 3845.1 41.77 HUMAN 1 0.1195 24.8245 SSRFEIHTPVSDKKK-p Q15361;T12-p SSRFEIHTPVSDKKK 0.436275274362594 0.0281558139299147 0.108 -0.347666666666667 6.63044023987496 21.0089981001329 0.108 -0.347666666666667 0.217248094552978 0.00792684178433863 1.39615566711251 -4.09483575618769 Q15361 TTF1 Q15361.T12.p_TTF1 Q15361_T12tS15s_2_2_12_15 Q15361 Q15361 Transcription termination factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10864.10891.4 7.83 7.83 99 2 2 2 0 569.8085 2116.2733 T12t S15s Hydrogen 8 (R) FEIHtPVsDKKK (K) FEIHT(1.0)PVS(1.0)DKKK K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S TTF1 103505.6 1 7 1295.1 156.82 HUMAN 1 6.6304 -21.009 SSRFSRKSFKLDYRL-p Q6IQ20;S43-p SSRFSRKSFKLDYRL 0.227627226039198 0.801958808795937 -0.229666666666667 0.0486666666666667 12.3603439326893 1.34121474986834 -0.229666666666667 0.0486666666666667 0.0580718426617144 0.734308448588298 -2.3964175075717 0.357369569975389 Q6IQ20 NAPEPLD Q6IQ20.S43.p_NAPEPLD Q6IQ20_S43s _1_1_43_43 Q6IQ20 Q6IQ20 N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20983.20983.3 10.29 2.57 8.899 3 1 1 0 837.4562 2430.3847 S43s TMT10 43 (K) sFKLDYRLEEDVTK (S) S(0.99)FKLDY(0.0)RLEEDVT(0.0)K K:TMT10,s:Phosphorylated S NAPEPLD 45937 1 1 5830.1 15.98 HUMAN 1 -12.3603 1.3412 SSRGPPVTPSSEKRS-p Q7Z460-4;T718-p SSRGPPVTPSSEKRS 0.626909473352187 0.52132311632464 0.087 0.0626666666666667 3.76813159670729 3.80169178352902 0.087 0.0626666666666667 0.419939609771284 0.416707024647191 0.87253990472728 0.878884295573439 Q7Z460 CLASP1 Q7Z460.4.T718.p_CLASP1 Q7Z460-4_T718t _1_1_718_718 Q7Z460-4 Q7Z460|Q7Z460-3|Q7Z460-5|F8WA11|Q7Z460-4|Q7Z460-2 Isoform 4 of CLIP-associating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9684.9684.3 10.1 10.1 4.783 3 1 1 0 512.9415 1456.8412 T718t TMT10 714 (R) GPPVtPSSEK (R) GPPVT(0.99)PS(0.0)S(0.0)EK K:TMT10,t:Phosphorylated T CLASP1 164028.5 2 45 158.3 498.15 HUMAN 1 3.7681 3.8017 SSRIMEETSGMEEEE-p F8VU39;T1048-p SSRIMEETSGMEEEE 0.754470308718171 0.776385332570271 -0.0466666666666667 0.056 2.33776950794932 1.52048505641537 -0.0466666666666667 0.056 0.58374483267547 0.704614367344056 -0.582369048960251 0.399738998104072 F8VU39 BAZ2A F8VU39.T1048.p_BAZ2A F8VU39_T1048tS1049s_2_2_1048_1049 F8VU39 Q9UIF9|F8VU39|Q9UIF9-3|Q9UIF9-2|J3KPG5 Bromodomain adjacent to zinc finger domain protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25364.25364.3 11.03 8.78 2.725 3 2 2 0 981.0726 2781.2644 T1048t S1049s TMT10 1044 (R) IMEEtsGMEEEEEEESIAAVPGR (R) IMEET(0.99)S(0.99)GMEEEEEEES(0.0)IAAVPGR t:Phosphorylated T,s:Phosphorylated S BAZ2A 212873.4 1 17 471.1 302.34 HUMAN 1 -2.3378 1.5205 SSRIRHRSEPQHPKE-p Q9HB19;S401-p SSRIRHRSEPQHPKE 0.307780675420775 0.0366324050433271 -0.235333333333333 -0.386 9.56336522635033 19.3215574126252 -0.235333333333333 -0.386 0.110576662432714 0.011690800749454 -1.90594140234933 -3.73149679892689 Q9HB19 PLEKHA2 Q9HB19.S401.p_PLEKHA2 Q9HB19_S401s _1_1_401_401 Q9HB19 Q9HB19|A8K727|A0A087X038|A0A087WZ32 Pleckstrin homology domain-containing family A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.2975.2975.3 9.84 6.2 99 1 1 1 0 551.959 1573.8963 S401s TMT10 399 (R) HRsEPQHPK (E) HRS(1.0)EPQHPK K:TMT10,s:Phosphorylated S PLEKHA2 47881.8 5 4 3407.1 51.78 HUMAN 1 -9.5634 -19.3216 SSRKLCASDKILEFD-p O94832;S493-p SSRKLCASDKILEFD 0.0795581939180351 0.623662510608201 0.433 0.0616666666666667 23.4880720325261 2.78867751211395 0.433 0.0616666666666667 0.0044791210207682 0.526177470450448 4.67076445160544 0.677062207035728 O94832 MYO1D O94832.S493.p_MYO1D O94832_S493s _1_1_493_493 O94832 O94832|J3QRN6|K7EIG7 Unconventional myosin-Id HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23730.23730.4 13.88 8.5 99 1 1 1 0 606.5604 2343.2531 S493s TMT10 490 (K) LCAsDKILEFDRDFR (I) LCAS(1.0)DKILEFDRDFR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MYO1D 116998.8 6 18 296.8 379.15 HUMAN 1 23.4881 2.7887 SSRKTTPSPGRQNSK-p Q14686;S1343-p SSRKTTPSPGRQNSK 0.380643803112374 0.0204064445669574 0.12 -0.330666666666667 7.75338799443212 23.1380016140935 0.12 -0.330666666666667 0.167749486939507 0.00485511854797517 1.59234867271358 -4.58195526658917 Q14686 NCOA6 Q14686.S1343.p_NCOA6 Q14686_S1343s_1_1_1343_1343 Q14686 Q14686 Nuclear receptor coactivator 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4356.4356.3 9.11 9.11 1.214 4 1 1 0 571.2982 1630.9277 S1343s N1348n TMT10 1340 (K) TTPsPGRQnSK (A) T(0.0)T(0.0)PS(0.99)PGRQN(1.0)S(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated NCOA6 219484.1 11 5 327.1 360.02 HUMAN 1 7.7534 -23.138 SSRLEEFSPRQAQMF-p Q9UGU0;S31-p SSRLEEFSPRQAQMF 0.803283629503308 0.644452350330852 -0.0363333333333333 0.05 1.83199861188422 2.60099777087495 -0.0363333333333333 0.05 0.655843379430942 0.549414633962872 -0.471266900462257 0.638053208245395 Q9UGU0 TCF20 Q9UGU0.S31.p_TCF20 Q9UGU0_S31s _1_1_31_31 Q9UGU0 Q9UGU0 Transcription factor 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15142.15142.2 8.19 8.19 99 1 1 1 0 593.7896 1106.6043 S31s TMT10 27 (R) LEEFsPR (Q) LEEFS(1.0)PR s:Phosphorylated S TCF20 213250.7 1 1 197.1 457.96 HUMAN 1 -1.832 2.601 SSRLLSFSPEEFPTL-p Q5JSZ5;S168-p SSRLLSFSPEEFPTL 0.297852699853076 0.00696013296731963 -0.177333333333333 -0.529 9.89184024519196 30.9235832441685 -0.177333333333333 -0.529 0.102521741665614 0.000808428611752012 -1.96292539534034 -6.70705793874775 Q5JSZ5 PRRC2B Q5JSZ5.S168.p_PRRC2B Q5JSZ5_S168s _1_1_168_168 Q5JSZ5 Q5JSZ5|Q5JSZ5-5|A0A1W2PQP5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.35262.35262.2 13.85 13.85 1.386 3 1 1 0 1023.5508 1966.1301 S168s TMT10 164 (R) LLSFsPEEFPTLK (A) LLS(0.0)FS(0.99)PEEFPT(0.0)LK K:TMT10,s:Phosphorylated S PRRC2B 244103.4 3 49 36.2 882.05 HUMAN 1 -9.8918 -30.9236 SSRLNLLTPRHLNQK-p Q9UPY3;T1001-p SSRLNLLTPRHLNQK 0.756932018046159 0.558376301638306 -0.0453333333333333 -0.0696666666666667 2.31590124578307 3.41198266706743 -0.0453333333333334 -0.0696666666666667 0.586691607030035 0.455828770774356 -0.577677326742798 -0.802795513435584 Q9UPY3 DICER1 Q9UPY3.T1001.p_DICER1 Q9UPY3_T1001t _1_1_1001_1001 Q9UPY3 Q9UPY3|Q9UPY3-2 Endoribonuclease Dicer HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20765.20765.2 9.07 3.18 99 1 1 1 0 568.326 1055.6774 T1001t TMT10 997 (R) LNLLtPR (H) LNLLT(1.0)PR t:Phosphorylated T DICER1 221416.1 1 2 942.1 197.99 HUMAN 1 -2.3159 -3.412 SSRMSCFSRPSMSPT-p Q9UQ35;S2118-p SSRMSCFSRPSMSPT 0.49945157428306 0.0252379759587049 0.101333333333333 0.339666666666667 5.55710600996278 21.7454174276549 0.101333333333333 0.339666666666667 0.27815661909972 0.00669049510412212 1.20524218962582 4.25951706302631 Q9UQ35 SRRM2 Q9UQ35.S2118.p_SRRM2 Q9UQ35_S2118s _1_1_2118_2118 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16888.16888.3 10.46 10.46 1.369 5 1 1 0 726.6638 2098.0081 S2118s TMT10 2114 (R) MSCFsRPSMSPTPLDR (C) MS(0.0)CFS(0.99)RPS(0.0)MS(0.0)PT(0.0)PLDR C:Carbamidomethylation,s:Phosphorylated S SRRM2 300351.7 4 133 2.1 3310.34 HUMAN 1 5.5571 21.7454 SSRQLSESFKSKEFV-p Q08945;S659-p SSRQLSESFKSKEFV 0.318436709095685 0.00393824909450483 -0.202333333333333 -0.652 9.29975482143988 35.4638342245115 -0.202333333333333 -0.652 0.117496388500682 0.000284195094671912 -1.86026517343037 -8.2665440001201 Q08945 SSRP1 Q08945.S659.p_SSRP1 Q08945_S659s _1_1_659_659 Q08945 Q08945 FACT complex subunit SSRP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13244.13244.2 10.03 10.03 2.163 3 1 1 0 911.0112 1741.0463 S659s TMT10 655 (R) QLSEsFKSK (E) QLS(0.0)ES(0.99)FKS(0.0)K K:TMT10,s:Phosphorylated S SSRP1 81415.7 8 5 1270.1 159.97 HUMAN 1 -9.2998 -35.4638 SSRRDTDSDTQDAND-p Q9Y2H0;S716-p SSRRDTDSDTQDAND 0.778483661025538 0.279659643877178 0.042 0.138 2.08939281848871 7.29064017874904 0.042 0.138 0.618102810254173 0.186610459441786 0.528508955990048 1.51136335965022 Q9Y2H0 DLGAP4 Q9Y2H0.S716.p_DLGAP4 Q9Y2H0_S716s _1_1_716_716 Q9Y2H0 Q9Y2H0|Q9Y2H0-1|Q9Y2H0-3|A0A0B4J2C2|F8WF49 Disks large-associated protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5405.5405.3 11.28 11.28 1.182 5 1 1 0 732.9722 2116.9341 S716s TMT10 713 (R) DTDsDTQDANDSSCK (S) DT(0.0)DS(0.99)DT(0.0)QDANDS(0.0)S(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DLGAP4 108980 4 4 298.1 378.69 HUMAN 1 2.0894 7.2906 SSRRGSQSDEDSCSL-p Q9UPZ3;S463-p SSRRGSQSDEDSCSL 0.951644746679854 0.0144466519684037 0.0133333333333333 0.479 0.42669268120728 25.5100111710122 0.0133333333333333 0.479 0.906422613661029 0.00281189359757893 0.123163987350435 5.16749566931484 Q9UPZ3 HPS5 Q9UPZ3.S463.p_HPS5 Q9UPZ3_S461sS463s_2_2_461_463 Q9UPZ3 Q9UPZ3|Q9UPZ3-2|G3V159 Hermansky-Pudlak syndrome 5 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11532.11532.4 8.47 8.47 1.593 7 2 2 0 854.8764 3256.5541 S461s S463s TMT10 459 (R) RGsQsDEDSCSLHSQTLSEDERFK (E) RGS(0.99)QS(0.99)DEDS(0.0)CS(0.0)LHS(0.0)QT(0.0)LS(0.0)EDERFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HPS5 129386.8 1 7 2159.1 95.05 HUMAN 1 0.4267 25.51 SSRRRAISETEENSD-p Q00987-11;S172-p SSRRRAISETEENSD 0.0240078279683837 0.00637911671662091 -1.148 -0.746 37.6744093450485 31.5949362232247 -1.148 -0.746 0.000170828003603263 0.000692638100853765 -9.15251801754886 -6.92070664686629 Q00987 MDM2 Q00987.11.S172.p_MDM2 Q00987-11_S172s _1_1_172_172 Q00987-11 Q00987-11|J3KN53|Q00987-9|Q00987-8|A7UKY0 Isoform 11 of E3 ubiquitin-protein ligase Mdm2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11430.11430.2 18.24 13.07 2.264 4 1 1 0 1037.9561 1994.9352 S172s TMT10 170 (R) AIsETEENSDELSGER (Q) AIS(0.99)ET(0.0)EENS(0.0)DELS(0.0)GER s:Phosphorylated S MDM2 57073.9 5 1 3182.1 58.37 HUMAN 1 -37.6744 -31.5949 SSRRRLHSLGLAAMP-p P55786;S39-p SSRRRLHSLGLAAMP 0.0118520459222321 0.00939964452688937 -1.24566666666667 -0.711666666666667 46.2575535240901 28.6095824246172 -1.24566666666667 -0.711666666666667 2.36725284731666e-05 0.0013773418943434 -13.376058261326 -6.01103861897558 P55786 NPEPPS P55786.S39.p_NPEPPS P55786_S39s _1_1_39_39 P55786 P55786|E9PLK3|A6NEC2|E9PPZ2|E9PPD4|A6NEC2-3|E9PJF9 Puromycin-sensitive aminopeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21312.21312.3 17.69 17.48 99 1 1 1 0 602.3329 1725.0133 S39s TMT10 37 (R) LHsLGLAAMPEK (R) LHS(1.0)LGLAAMPEK K:TMT10,s:Phosphorylated S NPEPPS 103959 10 1 1607.1 127.86 HUMAN 1 -46.2576 -28.6096 SSRSAPASPNHAGVL-p Q01167;S373-p SSRSAPASPNHAGVL 0.301590454921122 0.603290595686722 0.157333333333333 -0.0573333333333333 9.76763141860859 2.9776997791704 0.157333333333333 -0.0573333333333333 0.105496210110463 0.503767356213495 1.94136690693183 -0.71577918791934 Q01167 FOXK2 Q01167.S373.p_FOXK2 Q01167_S373s _1_1_373_373 Q01167 Q01167|Q01167-2 Forkhead box protein K2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9239.9239.4 12.32 12.32 1.207 8 1 1 0 732.1063 2845.439 S373s TMT10 369 (R) SAPAsPNHAGVLSAHSSGAQTPESLSR (E) S(0.0)APAS(0.99)PNHAGVLS(0.0)AHS(0.0)S(0.0)GAQT(0.0)PES(0.0)LS(0.0)R s:Phosphorylated S FOXK2 69288.9 1 8 689.1 243.19 HUMAN 1 9.7676 -2.9777 SSRSAPASPTHPGLM-p P85037;S420-p SSRSAPASPTHPGLM 0.336172963233061 0.105455441965347 0.179666666666667 0.175 8.82932213582537 12.9067028080383 0.179666666666667 0.175 0.13093862812914 0.0512070455221467 1.77881819538881 2.49291274116938 P85037 FOXK1 P85037.S420.p_FOXK1 P85037_S416sS420s_2_2_416_420 P85037 P85037|P85037-2 Forkhead box protein K1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9904.9904.2 15.58 15.58 3.374 4 2 2 0 833.3459 1505.7529 S416s S420s Hydrogen 416 (R) sAPAsPTHPGLMSPR (S) S(0.99)APAS(0.99)PT(0.0)HPGLMS(0.0)PR s:Phosphorylated S FOXK1 75912.4 18 17 686.1 243.66 HUMAN 1 8.8293 12.9067 SSRSGECSPVPMGSF-p P25054;S111-p SSRSGECSPVPMGSF 0.312426963787552 0.349442925829045 0.223666666666667 -0.126 9.45475120533941 6.05482257087978 0.223666666666667 -0.126 0.11337697866142 0.248037727035673 1.88711682280843 -1.29401342260735 P25054 APC P25054.S111.p_APC P25054_S111s _1_1_111_111 P25054 P25054|P25054-3|P25054-2|E7EMH9 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16627.16627.2 13.3 13.3 3.228 3 1 1 0 908.9012 1736.8297 S111s TMT10 107 (R) SGECsPVPMGSFPR (R) S(0.0)GECS(0.99)PVPMGS(0.0)FPR C:Carbamidomethylation,s:Phosphorylated S APC 313808.5 2 3 33.1 890.71 HUMAN 1 9.4548 -6.0548 SSRSRHSSISPVRLP-p Q9NYV4-2;S383-p SSRSRHSSISPVRLP 0.552107161722498 0.131895871226618 -0.0913333333333333 0.207666666666667 4.76112530526253 11.5978940992522 -0.0913333333333334 0.207666666666667 0.334108457595302 0.0692166522188876 -1.06009552917013 2.26012493414796 Q9NYV4 CDK12 Q9NYV4.2.S383.p_CDK12 Q9NYV4-2_S383sS385s_2_2_383_385 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22256.22256.4 20.88 20.88 1.208 6 2 2 0 595.7913 2220.2095 S383s S385s Hydrogen 381 (R) HSsIsPVRLPLNSSLGAELSR (K) HS(0.0)S(0.99)IS(0.99)PVRLPLNS(0.0)S(0.0)LGAELS(0.0)R s:Phosphorylated S CDK12 163853.1 24 42 59.1 708.76 HUMAN 1 -4.7611 11.5979 SSRSRSRSYSPAHNR-p Q9Y2W1;S53-p SSRSRSRSYSPAHNR 0.772037219526426 0.812748448415635 0.122333333333333 0.0843333333333334 2.14892485489895 1.26101680456981 0.122333333333333 0.0843333333333334 0.60968781367164 0.747994353657977 0.541535636866993 0.338093762439226 Q9Y2W1 THRAP3 Q9Y2W1.S53.p_THRAP3 Q9Y2W1_S53sS55s_2_2_53_55 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4746.4746.3 11.06 11.06 1.624 3 2 2 0 440.8495 1160.601 S53s S55s TMT10 53 (R) sYsPAHNR (E) S(0.99)Y(0.0)S(0.99)PAHNR s:Phosphorylated S THRAP3 108720.9 4 88 10.2 1293.04 HUMAN 1 2.1489 1.261 SSRSSLSSLSPPSSP-p Q9ULE0;S460-p SSRSSLSSLSPPSSP 0.427414948238645 0.523532937572638 0.117666666666667 0.0636666666666667 6.79746457244949 3.77654342333486 0.117666666666667 0.0636666666666667 0.209051622592155 0.419127018189889 1.42551177463934 0.874025145623175 Q9ULE0 WWC3 Q9ULE0.S460.p_WWC3 Q9ULE0_S460sS462s_2_2_460_462 Q9ULE0 Q9ULE0|Q9ULE0-2 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33441.33651.3 17.36 17.36 1.284 9 2 2 0 878.089 2472.3183 S460s S462s TMT10 456 (R) SSLSsLsPPSSPLDTPFLPASR (D) S(0.0)S(0.0)LS(0.0)S(0.99)LS(0.99)PPS(0.0)S(0.0)PLDT(0.0)PFLPAS(0.0)R s:Phosphorylated S WWC3 123814.7 5 31 161.1 495.35 HUMAN 1 6.7975 3.7765 SSRSVSGSPEPAAKK-p A9Z1X7;S765-p SSRSVSGSPEPAAKK 0.915274293199944 0.0045642445280084 -0.021 0.545 0.752592511007008 34.2745397236892 -0.021 0.545 0.840893022618241 0.000373719731048622 -0.210613080451413 7.83092843249073 A9Z1X7 NotFound A9Z1X7.S765.p_NotFound A9Z1X7_S765s _1_1_765_765 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.7946.7946.2 15.21 9.97 2.209 3 1 1 0 784.4098 1487.847 S765s TMT10 761 (R) SVSGsPEPAAK (K) S(0.0)VS(0.0)GS(0.99)PEPAAK K:TMT10,s:Phosphorylated S SRRM1 103445.7 6 45 8.1 1346.57 HUMAN 1 -0.7526 34.2745 SSRTGIPSGDELDSF-p Q8N1W1-6;S513-p SSRTGIPSGDELDSF 0.30206621659456 0.397519247330567 0.143 0.0906666666666667 9.74396772404577 5.3257083184898 0.143 0.0906666666666667 0.106072603272366 0.293379097430616 1.93726124762226 1.1631767332226 Q8N1W1 ARHGEF28 Q8N1W1.6.S513.p_ARHGEF28 Q8N1W1-6_S513s _1_1_513_513 Q8N1W1-6 Q8N1W1-6|Q8N1W1-3|Q8N1W1-4|Q8N1W1-5|Q8N1W1-2 Isoform 6 of Rho guanine nucleotide exchange factor 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27215.27215.3 20.18 20.18 1.893 6 1 1 0 984.1135 2870.3529 S513s TMT10 509 (R) TGIPsGDELDSFETNTEPDFNISR (A) T(0.0)GIPS(0.99)GDELDS(0.0)FET(0.0)NT(0.0)EPDFNIS(0.0)R s:Phosphorylated S ARHGEF28 196740.3 2 1 3005.1 63.48 HUMAN 1 9.744 5.3257 SSRVDFGSSERLGSW-p Q6ZUM4;S632-p SSRVDFGSSERLGSW 0.721360210980988 0.111612044995321 0.054 0.168333333333333 2.68089654527129 12.5708182647087 0.054 0.168477047226109 0.539399258960068 0.055324586100809 0.654818554988917 2.43272818788314 Q6ZUM4 ARHGAP27 Q6ZUM4.S632.p_ARHGAP27 Q6ZUM4_S632s _1_1_632_632 Q6ZUM4 Q6ZUM4|A0A0G2JNY3|E9PIR1|A0A0G2JRG8|Q6ZUM4-3|E9PNT2|Q6ZUM4-2|A0A0C4DGE6 Rho GTPase-activating protein 27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27153.27357.3 21.39 21.39 1.151 6 1 1 0 1176.5646 3447.7077 S632s TMT10 606 (K) AIAQGIQELSAELPPEESESSRVDFGsSER (L) AIAQGIQELS(0.0)AELPPEES(0.0)ES(0.0)S(0.0)RVDFGS(0.99)S(0.0)ER s:Phosphorylated S ARHGAP27 99078.8 14 10 467.1 303.27 HUMAN 1 2.6809 12.5708 SSRWDERSLSQRSRS-p P30414;S401-p SSRWDERSLSQRSRS 0.450344928446939 0.0159232555438984 0.141333333333333 0.405333333333333 6.40031297786329 24.8427414153642 0.141333333333333 0.405333333333333 0.229070256546911 0.00327888253490404 1.35557636438017 4.99787107211445 P30414 NKTR P30414.S401.p_NKTR P30414_S401s _1_1_401_401 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9144.9144.3 11.09 8.42 1.44 2 1 1 0 495.9068 1405.7385 S401s TMT10 397 (R) WDERsLSQR (S) WDERS(0.99)LS(0.0)QR s:Phosphorylated S NKTR 166700.6 2 7 202.1 449.45 HUMAN 1 6.4003 24.8427 SSSAAASTPPPGPPA-p Q8NDT2;T238-p SSSAAASTPPPGPPA 0.95578545369103 0.107317447223922 0.00833333333333333 0.207333333333333 0.384297633255143 12.8032328787871 0.00833333333333333 0.207333333333333 0.915314277355049 0.052441694007378 0.111400532952087 2.47433719022777 Q8NDT2 RBM15B Q8NDT2.T238.p_RBM15B Q8NDT2_T238t _1_1_238_238 Q8NDT2 Q8NDT2 Putative RNA-binding protein 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27233.27233.3 23.68 23.68 1.127 10 1 1 0 1292.9808 3796.9587 T238t TMT10 229 (R) SSSSSAAAStPPPGPPAPADPLGYLPLHGGYQYK (Q) S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)AAAS(0.0)T(0.99)PPPGPPAPADPLGY(0.0)LPLHGGY(0.0)QY(0.0)K K:TMT10,t:Phosphorylated T RBM15B 97489 6 6 199.1 454.11 HUMAN 1 0.3843 12.8032 SSSACSRSPEEEEEE-p Q9BWK5;S138-p SSSACSRSPEEEEEE 0.571686744233616 0.177965805879511 -0.125666666666667 0.158333333333333 4.47222168073387 9.86074053472664 -0.125666666666667 0.158333333333333 0.357090118079677 0.103258532005998 -1.00638565802746 1.95674728161284 Q9BWK5 C7orf49 Q9BWK5.S138.p_C7orf49 Q9BWK5_S138s _1_1_138_138 Q9BWK5 Q9BWK5|Q9BWK5-2|Q9BWK5-3 Cell cycle regulator of non-homologous end joining HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16090.16090.4 12.29 12.29 1.128 7 1 1 0 1031.4937 4043.0028 S138s TMT10 116 (K) QALAPGLSPSQRPGGSSSACSRsPEEEEEEDVLK (Y) QALAPGLS(0.0)PS(0.0)QRPGGS(0.0)S(0.0)S(0.0)ACS(0.0)RS(0.99)PEEEEEEDVLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CYREN 17056.9 1 2 4622.1 28.68 HUMAN 1 -4.4722 9.8607 SSSARPGTPSDHQSQ-p Q6Y7W6-5;T376-p SSSARPGTPSDHQSQ 0.930467350861374 0.0378265919437746 -0.015 0.515666666666667 0.621681030325761 19.0987952497452 -0.015 0.515666666666667 0.866626364430168 0.012306100996285 -0.176089185310351 3.68490418226151 Q6Y7W6 GIGYF2 Q6Y7W6.5.T376.p_GIGYF2 Q6Y7W6-5_T376t _1_1_376_376 Q6Y7W6-5 I1E4Y6|Q6Y7W6|Q6Y7W6-5|Q6Y7W6-4 Isoform 4 of GRB10-interacting GYF protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8532.8532.5 22.52 22.52 1.167 12 1 1 0 877.8022 4305.0089 T376t TMT10 353 (K) TDRVGVEASEETPQTSSSSARPGtPSDHQSQEASQFER (K) T(0.0)DRVGVEAS(0.0)EET(0.0)PQT(0.0)S(0.0)S(0.0)S(0.0)S(0.0)ARPGT(0.99)PS(0.0)DHQS(0.0)QEAS(0.0)QFER t:Phosphorylated T GIGYF2 149826.1 5 11 470.1 302.35 HUMAN 1 -0.6217 19.0988 SSSARSASVTTSPTR-p J3KQC6;S111-p SSSARSASVTTSPTR 0.652353452431113 0.418593254762966 -0.0733333333333333 -0.158333333333333 3.47955284447846 5.03260993058315 -0.0733333333333334 -0.158333333333333 0.448791595749151 0.313862194476023 -0.816239735334706 -1.10980516510704 J3KQC6 NotFound J3KQC6.S111.p_NotFound J3KQC6_S111s _1_1_111_111 J3KQC6 Q9BYE2|J3KQC6|E9PRA0|Q9BYE2-2|Q9BYE2-5 Transmembrane protease serine 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5479.5479.2 13.99 13.99 2.12 6 1 1 0 658.3272 1235.6793 S111s TMT10 109 (R) SAsVTTSPTR (V) S(0.0)AS(0.99)VT(0.0)T(0.0)S(0.0)PT(0.0)R s:Phosphorylated S TMPRSS13 64250 1 7 1604.1 128.27 HUMAN 1 -3.4796 -5.0326 SSSASVCSIDSTDDL-p Q96N64;S584-p SSSASVCSIDSTDDL 0.941288295555864 0.159530053139007 0.0146666666666667 -0.173666666666667 0.516540528653615 10.484611134032 0.0146666666666667 -0.173666666666667 0.887862977848716 0.0894414613961755 0.14778526036255 -2.06516316782708 Q96N64 PWWP2A Q96N64.S584.p_PWWP2A Q96N64_S584s _1_1_584_584 Q96N64 Q96N64 PWWP domain-containing protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13561.13561.3 17.27 17.27 2.755 8 1 1 0 923.7893 2689.3805 S584s TMT10 574 (K) KSDSSSASVCsIDSTDDLK (S) KS(0.0)DS(0.0)S(0.0)S(0.0)AS(0.0)VCS(0.99)IDS(0.0)T(0.0)DDLK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PWWP2A 82415.3 1 4 1984.1 104.07 HUMAN 1 0.5165 -10.4846 SSSCGKDTPSKKRKL-p O43148-2;T77-p SSSCGKDTPSKKRKL 0.0395731079578075 0.00209760205406633 0.674333333333333 -1.083 31.3405489676994 41.6803300079908 0.674333333333333 -1.083 0.000734421028178352 6.79152023831039e-05 6.85058683061234 -10.9135885064277 O43148 RNMT O43148.2.T77.p_RNMT O43148-2_T77t _1_1_77_77 O43148-2 O43148-2 Isoform 2 of mRNA cap guanine-N7 methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5181.5181.4 14.04 14.04 4.908 5 1 1 0 513.2593 1970.0468 T77t TMT10 69 (K) ESSSCGKDtPSK (K) ES(0.0)S(0.0)S(0.0)CGKDT(0.99)PS(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T RNMT 58408.2 4 2 3945.1 40.41 HUMAN 1 31.3405 -41.6803 SSSDTLVSEGEENQK-p Q5T0W9;S809-p SSSDTLVSEGEENQK 0.567747259590119 0.0364368427337184 0.0753333333333333 -0.282666666666667 4.52569811094605 19.3542209255586 0.0753333333333333 -0.282666666666667 0.352720083724058 0.0116032034562845 1.01637505461334 -3.73835451389434 Q5T0W9 FAM83B Q5T0W9.S809.p_FAM83B Q5T0W9_S809s _1_1_809_809 Q5T0W9 Q5T0W9 Protein FAM83B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14542.14542.3 19.68 19.68 3.528 5 1 1 0 959.1522 2795.47 S809s TMT10 800 (R) LCSSSDTLVsEGEENQKPK (K) LCS(0.0)S(0.0)S(0.0)DT(0.0)LVS(0.99)EGEENQKPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAM83B 115253.5 2 14 249.1 407.75 HUMAN 1 4.5257 -19.3542 SSSEEESSSSEEEKT-p Q14978-3;S432-p SSSEEESSSSEEEKT 0.036022948076598 0.267058450508649 -0.615 -0.204333333333333 33.528705710848 7.55032716242814 -0.615 -0.204333333333333 0.000443740868365218 0.175779119116268 -7.58185302278502 -1.55657751033607 Q14978 NOLC1 Q14978.3.S432.p_NOLC1 Q14978-3_S432s _1_1_432_432 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5612.5612.3 17.31 15.79 1.12 8 1 1 0 900.4153 2619.2724 S432s TMT10 421 (R) KADSSSSEEESsSSEEEK (T) KADS(0.0)S(0.0)S(0.0)S(0.0)EEES(0.0)S(0.99)S(0.0)S(0.0)EEEK K:TMT10,s:Phosphorylated S NOLC1 73744 1 9 72.1 655.55 HUMAN 1 -33.5287 -7.5503 SSSFFSISPTSNSSA-p Q9NUL3;S455-p SSSFFSISPTSNSSA 0.246501837710711 0.0302131588935149 -0.168333333333333 -0.382333333333333 11.6341382167342 20.5614796430705 -0.168333333333333 -0.382333333333333 0.0686414072053962 0.00878723084512262 -2.2676039161069 -3.99662502018657 Q9NUL3 STAU2 Q9NUL3.S455.p_STAU2 Q9NUL3_S455s _1_1_455_455 Q9NUL3 Q9NUL3|A0A0A0MTC5|Q9NUL3-2|E9PH62|E7EVJ4|Q9NUL3-7|A0A0A0MTC6|E7EPX0|Q9NUL3-3|F8VPI7|Q9NUL3-8|A0A0A0MTD1|Q9NUL3-6|A0A0A0MTC4|Q9NUL3-4|G5EA18 Double-stranded RNA-binding protein Staufen homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24195.24195.2 21.01 21.01 1.122 10 1 1 0 1421.1471 2761.33 S455s TMT10 443 (K) DMNQPSSSFFSIsPTSNSSATIAR (E) DMNQPS(0.0)S(0.0)S(0.0)FFS(0.0)IS(0.99)PT(0.0)S(0.0)NS(0.0)S(0.0)AT(0.0)IAR s:Phosphorylated S STAU2 62867.6 6 7 1170.1 170.28 HUMAN 1 -11.6341 -20.5615 SSSGGGSSGDEDGLE-p Q9P258;S51-p SSSGGGSSGDEDGLE 0.0576036189507777 0.72197682317235 0.707 0.0403333333333333 27.0420974962934 1.94855256592915 0.707 0.0403333333333333 0.00197601506079504 0.638476244658125 5.58027385289526 0.497321052406126 Q9P258 RCC2 Q9P258.S51.p_RCC2 Q9P258_S50sS51s_2_2_50_51 Q9P258 Q9P258 Protein RCC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14340.14340.3 19.93 14.12 2.03 6 2 2 0 1038.7732 2954.3798 S50s S51s TMT10 42 (R) CSSSSGGGssGDEDGLELDGAPGGGKR (A) CS(0.0)S(0.0)S(0.0)S(0.0)GGGS(0.99)S(0.99)GDEDGLELDGAPGGGKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RCC2 56825.2 6 4 2498.1 81.21 HUMAN 1 27.0421 1.9486 SSSGLPPSPVPSPRR-p G1UD79;S156-p SSSGLPPSPVPSPRR 0.916963697628859 0.359798204663505 0.0173333333333333 0.087 0.733977301039266 5.88946308082557 0.0173333333333333 0.087 0.844505086892638 0.257663968781455 0.205750392986268 1.26455158167006 G1UD79 FAM122B G1UD79.S156.p_FAM122B G1UD79_S156s _1_1_156_156 G1UD79 Q7Z309-2|Q7Z309-4|Q7Z309-5|G1UD79|Q7Z309-3 Protein FAM122B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22897.23520.3 16.72 16.72 2.688 5 1 1 0 684.3458 1971.0571 S156s TMT10 146 (K) MFVSSSGLPPsPVPSPR (R) MFVS(0.0)S(0.0)S(0.0)GLPPS(0.99)PVPS(0.0)PR s:Phosphorylated S SPACIA2 29414.5 5 6 835.1 215.14 HUMAN 1 0.734 5.8895 SSSGVPYSPAIPNKR-p Q9UPT5;S250-p SSSGVPYSPAIPNKR 0.593161151609383 0.237031655807163 0.0833333333333333 -0.118 4.18351546707082 8.23543230046559 0.0833333333333333 -0.118 0.381635224957735 0.150126296130893 0.95205019016888 -1.67543140944894 Q9UPT5 EXOC7 Q9UPT5.S250.p_EXOC7 Q9UPT5_S250s _1_1_250_250 Q9UPT5 Q9UPT5|Q9UPT5-6|A0A0A0MSB8|Q9UPT5-1|Q9UPT5-5|B4DJ07|Q9UPT5-2|Q9UPT5-4 Exocyst complex component 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16408.16408.2 16.49 13.08 3.411 7 1 1 0 1058.54 2036.1064 S250s TMT10 241 (K) SSSSSGVPYsPAIPNK (R) S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)GVPY(0.0)S(0.99)PAIPNK K:TMT10,s:Phosphorylated S EXOC7 83779.8 6 3 3488.1 49.83 HUMAN 1 4.1835 -8.2354 SSSKEGTSV______-p Q9P2E9;S1409-p SSSKEGTSV______ 0.10941212959015 0.00605456056815993 -0.408666666666667 -0.527 20.1251152985982 32.0106063526245 -0.408666666666667 -0.527 0.00971602156671034 0.000629418298691727 -3.90585305150321 -7.05577674116708 Q9P2E9 RRBP1 Q9P2E9.S1409.p_RRBP1 Q9P2E9_S1409s _1_1_1409_1409 Q9P2E9 Q9P2E9|A0A0A0MRV0|Q9P2E9-2|Q9P2E9-3|A0A087WVV2|F8W7S5 Ribosome-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7433.8204.2 9.24 9.24 1.436 5 1 1 0 896.4241 1711.875 S1409s TMT10 1398 (K) AEDGSSSKEGTsV (-) AEDGS(0.0)S(0.0)S(0.0)KEGT(0.0)S(0.99)V K:TMT10,s:Phosphorylated S RRBP1 152868.9 2 17 479.1 299.08 HUMAN 1 -20.1251 -32.0106 SSSKSEGSPSQRLEN-p A0A0D9SEY1;S793-p SSSKSEGSPSQRLEN 0.391178814803887 0.159338020801899 -0.242333333333333 0.163 7.52567659075093 10.4930669286869 -0.242333333333333 0.163 0.176779678984358 0.0892674866217971 -1.55275196962066 2.06663600003003 A0A0D9SEY1 NotFound A0A0D9SEY1.S793.p_NotFound A0A0D9SEY1_S793s _1_1_793_793 A0A0D9SEY1 O95819-3|A0A0D9SEY1|O95819-6|E7EN19|O95819-5|G5E948|O95819-2|O95819-4|G3XAA2|E7ENQ1|A0A0D9SG62|E7EX83|C9J840 Mitogen-activated protein kinase kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11509.11509.2 11.53 7.37 1.74 3 1 1 0 1020.5311 1960.0864 S793s TMT10 790 (K) SEGsPSQRLENAVK (K) S(0.0)EGS(0.99)PS(0.0)QRLENAVK K:TMT10,s:Phosphorylated S MAP4K4 151879.6 4 8 131.2 535.29 HUMAN 1 -7.5257 10.4931 SSSLGRKTPGPKDRI-p O15018;T718-p SSSLGRKTPGPKDRI 0.451737272492173 0.401415922774056 0.103333333333333 0.0933333333333334 6.37165624709269 5.27209345336166 0.103333333333333 0.0933333333333334 0.230586764383384 0.297023392855413 1.35051157423417 1.15345102916125 O15018 PDZD2 O15018.T718.p_PDZD2 O15018_T718t _1_1_718_718 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17825.17825.2 7.23 7.23 99 1 1 1 0 540.2696 999.5785 T718t Hydrogen 718 (K) tPGPKDR (I) T(1.0)PGPKDR K:TMT10-Lys-Only,t:Phosphorylated T PDZD2 304146 1 5 85.1 628.64 HUMAN 1 6.3717 5.2721 SSSLPLQSRGRARLL-p Q7Z6Z7;S2600-p SSSLPLQSRGRARLL 0.237800187730078 0.945818175866251 -0.223333333333333 0.0113333333333333 11.9583389139497 0.347405736112205 -0.223333333333333 0.0113333333333333 0.063703912853235 0.923122691061622 -2.3249472503987 0.101075944083702 Q7Z6Z7 HUWE1 Q7Z6Z7.S2600.p_HUWE1 Q7Z6Z7_S2600s _1_1_2600_2600 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.36730.36730.3 25.87 25.87 1.237 5 1 1 0 849.463 2466.4129 S2600s TMT10 2580 (R) LLGPSAAADILQLSSSLPLQsR (G) LLGPS(0.0)AAADILQLS(0.0)S(0.0)S(0.0)LPLQS(0.99)R s:Phosphorylated S HUWE1 485818.9 3 34 11.1 1210.45 HUMAN 1 -11.9583 0.3474 SSSPERRSPGSPVCR-p Q86VQ1;S145-p SSSPERRSPGSPVCR 0.194002306690035 0.205992828730006 0.21 0.142666666666667 13.896713660372 9.02917613010091 0.21 0.142666666666667 0.0407688662246122 0.125049623067319 2.67397446929067 1.81275921550484 Q86VQ1 GLCCI1 Q86VQ1.S145.p_GLCCI1 Q86VQ1_S145s _1_1_145_145 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3357.3357.2 15.38 11.29 4.108 2 1 1 0 470.1919 859.4091 S145s Hydrogen 145 (R) sPGSPVCR (A) S(0.99)PGS(0.0)PVCR C:Carbamidomethylation,s:Phosphorylated S GLCCI1 58707.2 3 4 307.1 373.49 HUMAN 1 13.8967 9.0292 SSSPIPLTPSKEGSA-p Q8N5Y2;T405-p SSSPIPLTPSKEGSA 0.133326246106049 0.0020346511457182 -0.472666666666667 -0.864 18.0255592386004 42.0563804165808 -0.472666666666667 -0.864 0.0157559312142634 6.22819151237445e-05 -3.46743982655522 -11.0961047050045 Q8N5Y2 MSL3 Q8N5Y2.T405.p_MSL3 Q8N5Y2_T405t _1_1_405_405 Q8N5Y2 Q8N5Y2|Q8N5Y2-3|Q8N5Y2-2|Q8N5Y2-6|Q8N5Y2-4 Male-specific lethal 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22929.22929.4 9.44 4.29 3.309 6 1 1 0 754.65 2935.6042 T405t TMT10 398 (R) SSSPIPLtPSKEGSAVFAGFEGRR (T) S(0.0)S(0.0)S(0.0)PIPLT(0.99)PS(0.0)KEGS(0.0)AVFAGFEGRR K:TMT10,t:Phosphorylated T MSL3 60279.1 3 6 1755.1 117.41 HUMAN 1 -18.0256 -42.0564 SSSPPRASPVRMAPS-p Q9Y2K6;S413-p SSSPPRASPVRMAPS 0.492994289859056 0.00847965722527311 -0.108666666666667 -0.479666666666667 5.65502769982058 29.4060768902404 -0.108666666666667 -0.479666666666667 0.271955114042173 0.00114654818448176 -1.22285667179674 -6.24379701002359 Q9Y2K6 USP20 Q9Y2K6.S413.p_USP20 Q9Y2K6_S413s _1_1_413_413 Q9Y2K6 Q9Y2K6 Ubiquitin carboxyl-terminal hydrolase 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7305.7305.3 9.63 3.64 2.492 4 1 1 0 521.6133 1482.859 S413s TMT10 405 (K) LSSSPPRAsPVR (M) LS(0.0)S(0.0)S(0.0)PPRAS(0.99)PVR s:Phosphorylated S USP20 103827 3 9 1704.1 120.18 HUMAN 1 -5.655 -29.4061 SSSPSVESLPGGREF-p Q92609-2;S566-p SSSPSVESLPGGREF 0.0869330223051714 0.00480740028593783 -0.394666666666667 -0.579333333333333 22.6213447317186 33.860481441829 -0.394666666666667 -0.579333333333333 0.00546846613322241 0.000411104145185262 -4.46547978403028 -7.68399149037631 Q92609 TBC1D5 Q92609.2.S566.p_TBC1D5 Q92609-2_S563sS566s_2_2_563_566 Q92609-2 Q92609|C9J3F6|Q92609-2 Isoform 2 of TBC1 domain family member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.18076.18076.5 11.62 11.62 1.229 10 2 2 0 731.1694 3491.8949 S563s S566s TMT10 557 (K) NISSSPsVEsLPGGREFTGSPPSSATKK (D) NIS(0.0)S(0.0)S(0.0)PS(0.99)VES(0.99)LPGGREFT(0.0)GS(0.0)PPS(0.0)S(0.0)AT(0.0)KK K:TMT10,s:Phosphorylated S TBC1D5 91784.7 6 15 328.1 359.68 HUMAN 1 -22.6213 -33.8605 SSSQLKGSPQAISRA-p Q8WYP5-2;S1195-p SSSQLKGSPQAISRA 0.176546701851388 0.00427354342479974 0.642333333333333 -0.769333333333333 14.9351894658399 34.8301066493806 0.642333333333334 -0.769333333333333 0.0320982276903684 0.000328843555389518 2.86630471778415 -8.03187860567569 Q8WYP5 AHCTF1 Q8WYP5.2.S1195.p_AHCTF1 Q8WYP5-2_S1195s _1_1_1195_1195 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13605.13605.4 20.98 20.98 4.381 6 1 1 0 571.0639 2201.2654 S1195s TMT10 1185 (R) SLPSSSQLKGsPQAISR (A) S(0.0)LPS(0.0)S(0.0)S(0.0)QLKGS(0.99)PQAIS(0.0)R K:TMT10,s:Phosphorylated S AHCTF1 258049.6 6 9 40.1 829.79 HUMAN 1 14.9352 -34.8301 SSSQRAASLDSVATS-p Q9Y2J4-4;S817-p SSSQRAASLDSVATS 0.160078188700121 0.491979140811295 -0.228 -0.147333333333333 15.9186392158892 4.11776068325856 -0.228 -0.147333333333333 0.025593876996582 0.387457374868407 -3.05258370099453 -0.939411203474863 Q9Y2J4 AMOTL2 Q9Y2J4.4.S817.p_AMOTL2 Q9Y2J4-4_S817s _1_1_817_817 Q9Y2J4-4 Q9Y2J4-4|Q9Y2J4-2|Q9Y2J4-3 Isoform 4 of Angiomotin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11369.11369.2 16.49 16.49 3.439 4 1 1 0 693.8458 1306.7164 S817s TMT10 815 (R) AAsLDSVATSR (V) AAS(0.99)LDS(0.0)VAT(0.0)S(0.0)R s:Phosphorylated S AMOTL2 92272.2 2 10 849.1 212.62 HUMAN 1 -15.9186 -4.1178 SSSQRGRSGSGNFGG-p P09651-2;S197-p SSSQRGRSGSGNFGG 0.00801666204445563 0.00105021245706955 -1.62866666666667 -1.52566666666667 57.7782633540136 50.8994558784274 -1.62866666666667 -1.52566666666667 1.66791404054087e-06 8.1293236095941e-06 -22.0163982459644 -16.314591771181 P09651 HNRNPA1 P09651.2.S197.p_HNRNPA1 P09651-2_S197s _1_1_197_197 P09651-2 P09651|P09651-2|F8W6I7 Isoform A1-A of Heterogeneous nuclear ribonucleoprotein A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3457.3457.3 12.67 12.67 2.129 2 1 1 0 473.2234 1337.6872 S197s TMT10 195 (R) GRsGSGNFGGGR (G) GRS(0.99)GS(0.0)GNFGGGR s:Phosphorylated S HNRNPA1 34309.7 3 7 504.1 289.99 HUMAN 1 -57.7783 -50.8995 SSSRKHDSIKDDSED-p Q05513;S223-p SSSRKHDSIKDDSED 0.133350942447308 0.536632701841882 -0.328 0.0766666666666667 18.019136177654 3.63749611246784 -0.328 0.0766666666666667 0.0157792509164818 0.432763265066877 -3.46613911282656 0.847035602571336 Q05513 PRKCZ Q05513.S223.p_PRKCZ Q05513_S223s_1_1_223_223 Q05513 Q05513|Q05513-3|Q05513-2|E9PBE1 Protein kinase C zeta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17473.17473.5 16.54 16.54 1.278 2 1 1 0 760.2155 3701.0804 S223s M238m TMT10 220 (R) KHDsIKDDSEDLKPVIDGmDGIK (I) KHDS(0.99)IKDDS(0.0)EDLKPVIDGM(1.0)DGIK K:TMT10,s:Phosphorylated S,m:Oxidized methionine PRKCZ 68571.6 3 2 859.1 210.7 HUMAN 1 -18.0191 3.6375 SSSRPQRSPKRMGVH-p Q5JTD0;S531-p SSSRPQRSPKRMGVH 0.557101429711056 0.499467615636032 -0.081 -0.105333333333333 4.69100785272829 4.03429048868929 -0.081 -0.105333333333333 0.339546466029976 0.394976221745219 -1.04711675033438 -0.923521199649954 Q5JTD0 TJAP1 Q5JTD0.S531.p_TJAP1 Q5JTD0_S531s _1_1_531_531 Q5JTD0 Q5JTD0|Q5JTD0-2|Q5JTD0-4 Tight junction-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12398.12398.4 11.68 11.68 1.159 4 1 1 0 558.8074 2152.2391 S531s TMT10 519 (R) AWPLPSSSRPQRsPK (R) AWPLPS(0.0)S(0.0)S(0.0)RPQRS(0.99)PK K:TMT10,s:Phosphorylated S TJAP1 62162.4 3 9 1364.1 149.81 HUMAN 1 -4.691 -4.0343 SSSRSDLYSSGRDRV-p P38159;Y335-p SSSRSDLYSSGRDRV 0.0444264213909403 0.486442791053232 0.500333333333333 0.121 30.0887271408856 4.18185265250877 0.500333333333334 0.121 0.000979777102912715 0.381781372361434 6.45916447700484 0.951568566912679 P38159 RBMX P38159.Y335.p_RBMX P38159_Y335y _1_1_335_335 P38159 P38159|P38159-2|H3BUY5 RNA-binding motif protein, X chromosome GG20160819_MSz_CCLE_T4D7_pY_Injection_01.6602.6671.2 16.58 8.51 2.543 4 1 1 0 597.2738 1113.5738 Y335y TMT10 332 (R) SDLySSGR (D) S(0.0)DLY(0.99)S(0.0)S(0.0)GR y:Phosphorylated Y RBMX 42331.1 5 7 6.1 110.91 HUMAN 1 30.0887 4.1819 SSSRSPHSPPKPPPV-p B2RXF5;S244-p SSSRSPHSPPKPPPV 0.952442048084725 0.875252582774429 0.00899999999999999 -0.0156666666666666 0.418419048846084 0.814122453629278 0.00899999999999999 -0.0156666666666666 0.908151061933936 0.829063421992817 0.120875774841527 -0.226558514230708 B2RXF5 ZBTB42 B2RXF5.S244.p_ZBTB42 B2RXF5_S244s _1_1_244_244 B2RXF5 B2RXF5 Zinc finger and BTB domain-containing protein 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11192.11192.3 14.02 14.02 2.822 2 1 1 0 758.7689 2194.3315 S244s TMT10 241 (R) SPHsPPKPPPVPAAK (G) S(0.0)PHS(0.99)PPKPPPVPAAK K:TMT10,s:Phosphorylated S ZBTB42 47631.5 3 1 3631.1 46.54 HUMAN 1 0.4184 -0.8141 SSSSAASSPSSGRAP-p Q9BXK1;S109-p SSSSAASSPSSGRAP 0.471941186312508 0.00897688600590423 -0.106666666666667 -0.424666666666667 6.01562195637736 28.9911020757018 -0.106666666666667 -0.424666666666667 0.25028671852334 0.00126150737094735 -1.28734604596299 -6.1216648959466 Q9BXK1 KLF16 Q9BXK1.S109.p_KLF16 Q9BXK1_S109s _1_1_109_109 Q9BXK1 Q9BXK1 Krueppel-like factor 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8583.8583.5 17.73 16.27 1.28 10 1 1 0 709.9548 3465.7723 S109s TMT10 89 (R) GGPGAAPGGASPASSSSAASsPSSGRAPGAAPSAAAK (S) GGPGAAPGGAS(0.0)PAS(0.0)S(0.0)S(0.0)S(0.0)AAS(0.0)S(0.99)PS(0.0)S(0.0)GRAPGAAPS(0.0)AAAK K:TMT10,s:Phosphorylated S KLF16 25886.6 3 3 2479.1 81.75 HUMAN 1 -6.0156 -28.9911 SSSSDSESDDEADVS-p P56181-2;S164-p SSSSDSESDDEADVS 0.476173375403983 0.0200510267309114 0.144 0.336333333333333 5.93173638743028 23.2708903117935 0.144 0.336333333333333 0.255168089078276 0.00470880785061937 1.27239343344269 4.61351327202117 P56181 NDUFV3 P56181.2.S164.p_NDUFV3 P56181-2_S164s _1_1_164_164 P56181-2 P56181-2 Isoform 2 of NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10863.10863.4 31.24 31.24 2.513 15 1 1 0 896.9075 3504.6349 S164s TMT10 147 (R) KVTSPSSSSSSSSSDSEsDDEADVSEVTPR (V) KVT(0.0)S(0.0)PS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)DS(0.0)ES(0.99)DDEADVS(0.0)EVT(0.0)PR K:TMT10,s:Phosphorylated S NDUFV3 51040.2 4 6 1273.1 159.36 HUMAN 1 5.9317 23.2709 SSSSFQPSPENCRQF-p Q5TGY3;S1095-p SSSSFQPSPENCRQF 0.306735184126758 0.84393587596449 0.202666666666667 0.022 9.59888163133438 1.03473051016688 0.202666666666667 0.022 0.109676059088043 0.788001327250494 1.91209867639864 0.282539703136689 Q5TGY3 AHDC1 Q5TGY3.S1095.p_AHDC1 Q5TGY3_S1095s _1_1_1095_1095 Q5TGY3 Q5TGY3 AT-hook DNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10757.10757.3 26.53 26.53 1.715 13 1 1 0 1005.105 2933.338 S1095s TMT10 1073 (K) GTTASATSAASAASSSSSSFQPsPENCR (Q) GT(0.0)T(0.0)AS(0.0)AT(0.0)S(0.0)AAS(0.0)AAS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)FQPS(0.99)PENCR C:Carbamidomethylation,s:Phosphorylated S AHDC1 170057.9 2 12 334.1 355.89 HUMAN 1 9.5989 1.0347 SSSSGGGSSGDEDGL-p Q9P258;S50-p SSSSGGGSSGDEDGL 0.0576036189507777 0.72197682317235 0.707 0.0403333333333333 27.0420974962934 1.94855256592915 0.707 0.0403333333333333 0.00197601506079504 0.638476244658125 5.58027385289526 0.497321052406126 Q9P258 RCC2 Q9P258.S50.p_RCC2 Q9P258_S50sS51s_2_2_50_51 Q9P258 Q9P258 Protein RCC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14340.14340.3 19.93 14.12 2.03 6 2 2 0 1038.7732 2954.3798 S50s S51s TMT10 42 (R) CSSSSGGGssGDEDGLELDGAPGGGKR (A) CS(0.0)S(0.0)S(0.0)S(0.0)GGGS(0.99)S(0.99)GDEDGLELDGAPGGGKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RCC2 56825.2 6 4 2498.1 81.21 HUMAN 1 27.0421 1.9486 SSSSGMQSCGEEEGE-p O75962;S1854-p SSSSGMQSCGEEEGE 0.404336552316216 0.93425860186785 -0.167 -0.0113333333333333 7.26265986939829 0.417399832777051 -0.167 -0.0113333333333333 0.187816616740426 0.908364214717158 -1.50691662409266 -0.120582476107258 O75962 TRIO O75962.S1854.p_TRIO O75962_S1854s _1_1_1854_1854 O75962 O75962|O75962-4|O75962-2|O75962-5 Triple functional domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26032.26032.5 21.44 21.44 3.601 7 1 1 0 1016.2609 4997.3127 S1854s TMT10 1847 (K) SSSSGMQsCGEEEGEEGADAVPLPPPMAIQQHSLLQPDSQDDK (A) S(0.0)S(0.0)S(0.0)S(0.0)GMQS(0.99)CGEEEGEEGADAVPLPPPMAIQQHS(0.0)LLQPDS(0.0)QDDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TRIO 349974.9 1 12 450.1 308.79 HUMAN 1 -7.2627 -0.4174 SSSSGSDSDSEVDKK-p P53999;S17-p SSSSGSDSDSEVDKK 0.167516061063847 0.451865028373067 -0.234 0.135 15.4998094031118 4.59754135695694 -0.234 0.135 0.0281850662309719 0.346933201899984 -2.97272706410021 1.02956641483594 P53999 SUB1 P53999.S17.p_SUB1 P53999_S17s _1_1_17_17 P53999 P53999|D6R970 Activated RNA polymerase II transcriptional coactivator p15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12768.12768.2 19.95 16.98 1.137 8 1 1 0 1177.0405 2273.1033 S17s TMT10 6 (K) ELVSSSSSGSDsDSEVDK (K) ELVS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)GS(0.0)DS(0.99)DS(0.0)EVDK K:TMT10,s:Phosphorylated S SUB1 14395.1 1 2 2095.1 97.85 HUMAN 1 -15.4998 4.5975 SSSSKGDSPELKPRA-p Q5VWQ8;S978-p SSSSKGDSPELKPRA 0.527292389305629 0.0353661191291574 -0.15 0.357666666666667 5.14444485154447 19.5364728734527 -0.15 0.357666666666667 0.305883122474608 0.0111263498794778 -1.13046368597489 3.77674108213588 Q5VWQ8 DAB2IP Q5VWQ8.S978.p_DAB2IP Q5VWQ8_S978s _1_1_978_978 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7108.7108.3 14.78 10.11 3.085 5 1 1 0 833.4465 2418.3556 S978s TMT10 969 (R) QQSSSSKGDsPELKPR (A) QQS(0.0)S(0.0)S(0.0)S(0.0)KGDS(0.99)PELKPR K:TMT10,s:Phosphorylated S DAB2IP 132592.9 4 19 281.1 388.28 HUMAN 1 -5.1444 19.5365 SSSSLEKSYELPDGQ-p P63261;S239-p SSSSLEKSYELPDGQ 0.429365892463725 0.0330183593605983 -0.194666666666667 0.281 6.75999484096315 19.9746291064362 -0.194666666666667 0.281 0.210863065479974 0.0100585896109635 -1.41893265601725 3.8698922618067 P63261 ACTG1 P63261.S239.p_ACTG1 P63261_S239s _1_1_239_239 P63261 Q6S8J3|A5A3E0|P68133|P62736|P68032|Q562R1|P63267|P60709|P63261|Q9BYX7|P63267-2 Actin, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24690.24690.2 14.4 9.99 6.618 3 1 1 0 1050.5137 2020.0549 S239s TMT10 239 (K) sYELPDGQVITIGNER (F) S(0.99)Y(0.0)ELPDGQVIT(0.0)IGNER s:Phosphorylated S ACTG1 42134.4 4 14 1233.1 163.71 HUMAN 1 -6.76 19.9746 SSSSMDLSRRSSLVG-p Q9H0B6;S615-p SSSSMDLSRRSSLVG 0.18863765659071 0.234608393103568 0.203 -0.136666666666667 14.2096650862603 8.29148991527409 0.203 -0.136666666666667 0.0379344237636089 0.14820095713176 2.73149520207085 -1.68513745030175 Q9H0B6 KLC2 Q9H0B6.S615.p_KLC2 Q9H0B6_S615s _1_1_615_615 Q9H0B6 Q9H0B6 Kinesin light chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13080.13080.2 13.29 6.55 3.774 6 1 1 0 746.8492 1412.7253 S615s TMT10 606 (R) TLSSSSMDLsR (R) T(0.0)LS(0.0)S(0.0)S(0.0)S(0.0)MDLS(0.99)R s:Phosphorylated S KLC2 69332.8 3 11 1131.1 174.01 HUMAN 1 14.2097 -8.2915 SSSSMSLSPKLCAEK-p O15119;S707-p SSSSMSLSPKLCAEK 0.98157533406859 0.156254140733103 -0.00366666666666668 -0.169333333333333 0.160462971418219 10.6015602088764 -0.00366666666666668 -0.169333333333333 0.963726281930276 0.0870650751290322 -0.0476212801696442 -2.08554265605601 O15119 TBX3 O15119.S707.p_TBX3 O15119_S707s _1_1_707_707 O15119 O15119|O15119-2|O15119-3 T-box transcription factor TBX3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16029.16029.2 16.37 10.16 1.103 9 1 1 0 968.9892 1857.004 S707s TMT10 696 (R) SSTLSSSSMSLsPK (L) S(0.0)S(0.0)T(0.0)LS(0.0)S(0.0)S(0.0)S(0.0)MS(0.0)LS(0.99)PK K:TMT10,s:Phosphorylated S TBX3 79786.8 8 8 1589.1 129.37 HUMAN 1 -0.1605 -10.6016 SSSSPANSDVEIDGI-p O60293;S809-p SSSSPANSDVEIDGI 0.318436709095685 0.471000085835072 0.158333333333333 0.0706666666666667 9.30177009591034 4.35882445280827 0.158333333333333 0.0706666666666667 0.117441878818485 0.366536775301921 1.86061422419765 0.984949328702027 O60293 ZFC3H1 O60293.S809.p_ZFC3H1 O60293_S809s _1_1_809_809 O60293 O60293|O60293-2 Zinc finger C3H1 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14075.14075.2 18.12 18.12 3.76 6 1 1 0 1050.9897 2020.9985 S809s TMT10 801 (K) TSSSSPANsDVEIDGIGR (I) T(0.0)S(0.0)S(0.0)S(0.0)S(0.0)PANS(0.99)DVEIDGIGR s:Phosphorylated S ZFC3H1 228291.3 2 14 311.1 371.67 HUMAN 1 9.3018 4.3588 SSSSRAVSPFAKIRS-p Q9Y2H2;S1069-p SSSSRAVSPFAKIRS 0.521693264668019 0.510411418247675 0.0876666666666667 0.0663333333333333 5.22458308594573 3.91577355705603 0.0876666666666667 0.0663333333333333 0.300290567999031 0.405903358079605 1.1450594251148 0.900844805588312 Q9Y2H2 INPP5F Q9Y2H2.S1069.p_INPP5F Q9Y2H2_S1069s _1_1_1069_1069 Q9Y2H2 Q9Y2H2|Q9Y2H2-4 Phosphatidylinositide phosphatase SAC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15730.15730.2 11.48 8.09 99 1 1 1 0 629.3549 1177.7345 S1069s TMT10 1067 (R) AVsPFAK (I) AVS(1.0)PFAK K:TMT10,s:Phosphorylated S INPP5F 129431.7 2 6 928.1 199.49 HUMAN 1 5.2246 3.9158 SSSSRSRSFTLDDES-p Q86WR7;S43-p SSSSRSRSFTLDDES 0.0617660610365025 0.0041902045604516 -0.503666666666667 -0.596 26.3347071584347 34.9805641115716 -0.503666666666667 -0.596 0.00232556929200842 0.000317646144854325 -5.3899553617306 -8.08706111894276 Q86WR7 PROSER2 Q86WR7.S43.p_PROSER2 Q86WR7_S43s _1_1_43_43 Q86WR7 Q86WR7|Q86WR7-2 Proline and serine-rich protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19574.19574.2 13.6 13.6 1.556 3 1 1 0 732.3472 1383.7205 S43s Hydrogen 43 (R) sFTLDDESLK (Y) S(0.99)FT(0.0)LDDES(0.0)LK K:TMT10-Lys-Only,s:Phosphorylated S PROSER2 46143.5 4 2 734.1 235.52 HUMAN 1 -26.3347 -34.9806 SSSSRTRTPASINAT-p Q7KZ85;T1532-p SSSSRTRTPASINAT 0.884993920911066 0.866954639619303 0.025 -0.019 1.04940222945848 0.872968274473325 0.025 -0.019 0.785343723258546 0.817905582755245 0.286224958626345 -0.24167970835756 Q7KZ85 SUPT6H Q7KZ85.T1532.p_SUPT6H Q7KZ85_T1532tS1535s_2_2_1532_1535 Q7KZ85 Q7KZ85|Q7KZ85-2 Transcription elongation factor SPT6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24005.24005.2 7.75 7.75 1.139 5 2 2 0 1300.1462 2439.3517 T1532t S1535s TMT10 1530 (R) TRtPAsINATPANINLADLTR (A) T(0.0)RT(0.99)PAS(0.99)INAT(0.0)PANINLADLT(0.0)R t:Phosphorylated T,s:Phosphorylated S SUPT6H 200324.3 7 17 279.1 388.92 HUMAN 1 1.0494 -0.873 SSSSSAASDTATSTQ-p Q96T37;S878-p SSSSSAASDTATSTQ 0.227820998051172 0.129386359975063 0.324 0.159333333333333 12.3509853183423 11.7048040594041 0.324 0.159333333333333 0.0581971166376558 0.0675335522413436 2.39474881497252 2.27897751050199 Q96T37 RBM15 Q96T37.S878.p_RBM15 Q96T37_S878s _1_1_878_878 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5053.5053.3 11.21 7.3 1.164 10 1 1 0 740.356 2139.0839 S878s TMT10 871 (R) SSSSSAAsDTATSTQRPLR (N) S(0.0)S(0.0)S(0.0)S(0.0)S(0.0)AAS(0.99)DT(0.0)AT(0.0)S(0.0)T(0.0)QRPLR s:Phosphorylated S RBM15 107414.9 2 30 55.1 724.11 HUMAN 1 12.351 11.7048 SSSSSNDSGNKVGIQ-p Q09666;S5870-p SSSSSNDSGNKVGIQ 0.146555245330487 0.108676312322401 0.542333333333333 -0.328666666666667 16.9825317462571 12.7345551374069 0.542333333333333 -0.328666666666667 0.0200330384866282 0.0532775795562815 3.25919507112152 -2.46202542581344 Q09666 AHNAK Q09666.S5870.p_AHNAK Q09666_S5870s _1_1_5870_5870 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24844.24844.4 10.2 10.2 10.2 9 1 1 0 1004.8005 3936.1947 S5870s TMT10 5862 (R) LSSSSSNDsGNKVGIQLPEVELSVSTKKE (-) LS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)NDS(0.99)GNKVGIQLPEVELS(0.0)VS(0.0)T(0.0)KKE K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 169 1.1 4313.36 HUMAN 1 16.9825 -12.7346 SSSSSVSSLNSSTLS-p Q8IYJ3;S244-p SSSSSVSSLNSSTLS 0.62753280718401 0.778772570149873 0.074 0.03 3.76203981468383 1.50446070638805 0.074 0.03 0.420529065928774 0.707219015524393 0.871360952777802 0.395990524582072 Q8IYJ3 SYTL1 Q8IYJ3.S244.p_SYTL1 Q8IYJ3_S244s _1_1_244_244 Q8IYJ3 Q8IYJ3|Q8IYJ3-2|A0A087X1N4 Synaptotagmin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25068.25271.3 28.31 28.31 1.107 14 1 1 0 1200.2305 3518.7152 S244s TMT10 235 (R) MLSSSSSVSsLNSSTLSGSQMSLSGDAEAVQVR (G) MLS(0.0)S(0.0)S(0.0)S(0.0)S(0.0)VS(0.0)S(0.99)LNS(0.0)S(0.0)T(0.0)LS(0.0)GS(0.0)QMS(0.0)LS(0.0)GDAEAVQVR s:Phosphorylated S SYTL1 62141.3 11 6 1335.1 152.58 HUMAN 1 3.762 1.5045 SSSSTIGSPSSRTNI-p Q5THJ4;S3010-p SSSSTIGSPSSRTNI 0.187294971032731 0.0494427783535235 0.565333333333333 -0.651333333333333 14.2783200632236 17.4671440983438 0.565333333333333 -0.651333333333333 0.0373394566252134 0.0179178373591278 2.74416320751648 -3.35257395871089 Q5THJ4 VPS13D Q5THJ4.S3010.p_VPS13D Q5THJ4_S3010s _1_1_3010_3010 Q5THJ4 Q5THJ4 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4765.4765.2 16.74 13.07 2 8 1 1 0 788.365 1495.755 S3010s TMT10 3002 (K) NSSSSTIGsPSSR (T) NS(0.0)S(0.0)S(0.0)S(0.0)T(0.0)IGS(0.99)PS(0.0)S(0.0)R s:Phosphorylated S VPS13D 495672.3 3 23 124.1 545.31 HUMAN 1 14.2783 -17.4671 SSSSYPISPAVSRTQ-p Q15149;S4396-p SSSSYPISPAVSRTQ 0.0635370415880919 0.0166963636681182 0.467666666666667 0.353666666666667 25.9175623815149 24.5404912235839 0.467666666666667 0.353666666666667 0.00256002237923056 0.00351520678334554 5.2799842843406 4.92233385730772 Q15149 PLEC Q15149.S4396.p_PLEC Q15149_S4396s _1_1_4396_4396 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12552.12552.2 20.66 20.66 3.147 10 1 1 0 1032.4984 1984.0185 S4396s TMT10 4384 (R) SSSVGSSSSYPIsPAVSR (T) S(0.0)S(0.0)S(0.0)VGS(0.0)S(0.0)S(0.0)S(0.0)Y(0.0)PIS(0.99)PAVS(0.0)R s:Phosphorylated S PLEC 533778 4 36 44.1 794.85 HUMAN 1 25.9176 24.5405 SSSVFAESPGGKTRS-p A0A087X165;S556-p SSSVFAESPGGKTRS 0.123350251698765 0.0785505277609857 0.340333333333333 -0.256 18.9173887462397 14.665949954103 0.340333333333333 -0.256 0.0128310183293889 0.0341511242048782 3.65036580749912 -2.81424498186029 A0A087X165 NotFound A0A087X165.S556.p_NotFound A0A087X165_S556s _1_1_556_556 A0A087X165 A0A087X165|Q9C0H9-5|Q9C0H9-2 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13432.13432.2 17.4 17.4 5.403 5 1 1 0 975.4661 1869.9594 S556s TMT10 546 (K) DSGSSSVFAEsPGGK (T) DS(0.0)GS(0.0)S(0.0)S(0.0)VFAES(0.99)PGGK K:TMT10,s:Phosphorylated S SRCIN1 130745.5 2 19 98.1 603.22 HUMAN 1 18.9174 -14.6659 SSSVPYMSPNQEVKS-p A0A087X127;S388-p SSSVPYMSPNQEVKS 0.56732930889055 0.723381537131527 -0.128666666666667 0.0393333333333333 4.53342837291712 1.93519269560579 -0.128666666666667 0.0393333333333333 0.352092815000154 0.640443364593039 -1.01781722008357 0.494344962838037 A0A087X127 NotFound A0A087X127.S388.p_NotFound A0A087X127_S388s _1_1_388_388 A0A087X127 A0A087X127|Q8NF64|Q8NF64-2|E7EWM3|Q8NF64-3 Zinc finger MIZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28414.28414.5 15.73 15.73 1.801 11 1 1 0 816.608 3999.0284 S388s TMT10 361 (R) SIPGYPSSPLPGNPTPPMTPSSSVPYMsPNQEVK (S) S(0.0)IPGY(0.0)PS(0.0)S(0.0)PLPGNPT(0.0)PPMT(0.0)PS(0.0)S(0.0)S(0.0)VPY(0.0)MS(0.99)PNQEVK K:TMT10,s:Phosphorylated S ZMIZ2 97653.3 1 2 4436.1 31.43 HUMAN 1 -4.5334 1.9352 SSTALRSSPIMRKKV-p A0A087WZV0;S1207-p SSTALRSSPIMRKKV 0.86012285513759 0.157411785745899 -0.0286666666666667 0.209666666666667 1.27832148237809 10.5610777464143 -0.0286666666666667 0.209666666666667 0.745019863205063 0.0878804405418968 -0.342305617536568 2.07848591304496 A0A087WZV0 PPIP5K2 A0A087WZV0.S1207.p_PPIP5K2 A0A087WZV0_S1207s_1_1_1207_1207 A0A087WZV0 A0A087WZV0|O43314|O43314-2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12267.12267.3 9.47 9.47 1.382 6 1 1 0 682.3484 1949.0687 S1207s M1210m TMT10 1196 (K) TAEISSTALRSsPImR (K) T(0.0)AEIS(0.0)S(0.0)T(0.0)ALRS(0.0)S(0.99)PIM(1.0)R s:Phosphorylated S,m:Oxidized methionine PPIP5K2 145671.7 18 10 778.1 226.58 HUMAN 1 -1.2783 10.5611 SSTAVAGSPRGHGQS-p Q9H1I8;S713-p SSTAVAGSPRGHGQS 0.204124866753728 0.705914980899899 0.455333333333333 -0.072 13.3610193135172 2.07742010848963 0.455333333333333 -0.072 0.0461209313442433 0.619809158393028 2.57632874810753 -0.525817895848228 Q9H1I8 ASCC2 Q9H1I8.S713.p_ASCC2 Q9H1I8_S713s _1_1_713_713 Q9H1I8 Q9H1I8 Activating signal cointegrator 1 complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3610.3610.3 9.88 6.4 8.314 5 1 1 0 623.9645 1789.9143 S713s TMT10 701 (K) GYRHDSSTAVAGsPR (G) GY(0.0)RHDS(0.0)S(0.0)T(0.0)AVAGS(0.99)PR s:Phosphorylated S ASCC2 87100.5 1 2 4824.1 26.23 HUMAN 1 13.361 -2.0774 SSTDRSPYEKVSAGN-p A0A087WWM1;Y1236-p SSTDRSPYEKVSAGN 0.0715981735064038 0.118221029117895 0.487333333333333 -0.171666666666667 24.7462993109869 12.2274154883582 0.487333333333333 -0.171666666666667 0.00335250989922202 0.0598767819255107 4.97980783705 -2.37152811830132 A0A087WWM1 NotFound A0A087WWM1.Y1236.p_NotFound A0A087WWM1_Y1236y _1_1_1236_1236 A0A087WWM1 P15941-2|A0A087WWM1|P15941-11|P15941-17|P15941-7|A0A0A0MRB3|A0A087X0L2|P15941-6|P15941-3|P15941-4|A0A087X2A4|A0A0C4DGW3|P15941-8|A0A0A0MSH4|B1AVQ7|P15941-15|A6ZIE3|P15941-10|A6ZIE4|P15941-9|P15941-16|P15941-12 Mucin-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11150.11588.3 19.04 19.04 5.186 6 1 1 0 722.0287 2084.1064 Y1236y TMT10 1225 (R) YVPPSSTDRSPyEK (V) Y(0.0)VPPS(0.0)S(0.0)T(0.0)DRS(0.0)PY(0.99)EK K:TMT10,y:Phosphorylated Y MUC1 123184 4 1 184.1 19.04 HUMAN 1 24.7463 -12.2274 SSTGSVGSPDQLPLA-p Q15834;S190-p SSTGSVGSPDQLPLA 0.644828460022835 0.227035570692224 0.065 0.195 3.56607808523227 8.4814538047581 0.065 0.195 0.439938724639414 0.141858257038289 0.833219728794497 1.71801564526377 Q15834 CCDC85B Q15834.S190.p_CCDC85B Q15834_S190s _1_1_190_190 Q15834 Q15834 Coiled-coil domain-containing protein 85B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24060.24372.3 13.38 13.38 2.218 7 1 1 0 948.4078 2763.2464 S190s TMT10 177 (R) DLGDGSSSTGSVGsPDQLPLACSPDD (-) DLGDGS(0.0)S(0.0)S(0.0)T(0.0)GS(0.0)VGS(0.99)PDQLPLACS(0.0)PDD C:Carbamidomethylation,s:Phosphorylated S CCDC85B 22432.8 1 1 6181.1 13.38 HUMAN 1 3.5661 8.4815 SSTKGILSPRAPKQQ-p O94913;S633-p SSTKGILSPRAPKQQ 0.890046614604404 0.0699866703265787 -0.0646666666666667 -0.642666666666666 0.988044843077087 15.3585067321981 -0.0646666666666667 -0.642666666666666 0.796517855296137 0.0291171810418581 -0.270876907921066 -2.94398610612902 O94913 PCF11 O94913.S633.p_PCF11 O94913_S633s _1_1_633_633 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13173.13173.3 8.92 8.92 99 1 1 1 0 492.9618 1396.904 S633s TMT10 630 (K) GILsPRAPK (Q) GILS(1.0)PRAPK K:TMT10,s:Phosphorylated S PCF11 173731.7 2 9 508.1 288.88 HUMAN 1 -0.988 -15.3585 SSTKRLKSVEDEMDS-p Q12857-2;S280-p SSTKRLKSVEDEMDS 0.286866398353762 0.0269995627488565 0.185333333333333 -0.354666666666667 10.231137803604 21.2898044378592 0.185333333333333 -0.354666666666667 0.0948170020678444 0.0074305259668812 2.02189715176428 -4.15717338174705 Q12857 NFIA Q12857.2.S280.p_NFIA Q12857-2_S280s _1_1_280_280 Q12857-2 Q12857-3|Q12857-2|B1AKN5|B1AKN7 Isoform 2 of Nuclear factor 1 A-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18743.18743.3 12.1 12.1 3.528 4 1 1 0 847.0219 2459.087 S280s TMT10 280 (K) sVEDEMDSPGEEPFYTGQGR (S) S(0.99)VEDEMDS(0.0)PGEEPFY(0.0)T(0.0)GQGR s:Phosphorylated S NFIA 55018.3 1 7 555.1 273.2 HUMAN 1 10.2311 -21.2898 SSTSEVHSPPNVGLR-p Q8WWQ0;S683-p SSTSEVHSPPNVGLR 0.99081912979397 0.0135098973611704 -0.00233333333333334 0.393 0.0824673756751133 25.9841804392644 -0.00233333333333336 0.393 0.981190336806351 0.00252105288474293 -0.024685836313252 5.29049178696303 Q8WWQ0 PHIP Q8WWQ0.S683.p_PHIP Q8WWQ0_S683s _1_1_683_683 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9812.9812.3 9.32 6.95 3.444 6 1 1 0 763.7237 2209.1887 S683s TMT10 673 (R) GSISSTSEVHsPPNVGLRR (S) GS(0.0)IS(0.0)S(0.0)T(0.0)S(0.0)EVHS(0.99)PPNVGLRR s:Phosphorylated S PHIP 208454.1 1 5 108.1 577.05 HUMAN 1 -0.0825 25.9842 SSTTLTKSFTSSSPS-p O94875-12;S452-p SSTTLTKSFTSSSPS 0.51600777106238 0.00995309608398391 -0.120333333333333 0.737 5.30463135948293 28.1386130938752 -0.120333333333333 0.737 0.294806370534557 0.00153510713629233 -1.15960190690639 5.87662219494635 O94875 SORBS2 O94875.12.S452.p_SORBS2 O94875-12_S452s _1_1_452_452 O94875-12 O94875-11|O94875-7|O94875-10|O94875-12|O94875-4|O94875-2|O94875-8|O94875-3 Isoform 12 of Sorbin and SH3 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7255.7255.2 13.51 13.51 2.208 8 1 1 0 768.3508 1455.7277 S452s TMT10 452 (K) sFTSSSPSSPSR (A) S(0.99)FT(0.0)S(0.0)S(0.0)S(0.0)PS(0.0)S(0.0)PS(0.0)R s:Phosphorylated S SORBS2 81021.6 1 11 962.1 194.05 HUMAN 1 -5.3046 28.1386 SSTTPRLSRLATNTS-p E7EVA0;S2066-p SSTTPRLSRLATNTS 0.187863102695022 0.147228921248642 0.261333333333333 0.157666666666667 14.2528801486242 10.9516943200969 0.261333333333333 0.157666666666667 0.0375588239545955 0.0803212702379491 2.73946701467132 2.14668580928104 E7EVA0 NotFound E7EVA0.S2066.p_NotFound E7EVA0_T2062tS2066s_2_2_2062_2066 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4461.4461.3 8 1.84 1.169 5 2 2 0 497.5755 1330.764 T2062t S2066s TMT10 2058 (K) PSSTtPRLsR (L) PS(0.0)S(0.0)T(0.0)T(0.99)PRLS(0.99)R t:Phosphorylated T,s:Phosphorylated S MAP4 246695.2 1 47 38.1 865.62 HUMAN 1 14.2529 10.9517 SSVDRHHSVEIKIEK-p Q14151;S513-p SSVDRHHSVEIKIEK 0.586683791103262 0.0084962313920477 0.0803333333333333 0.445666666666667 4.26123212749973 29.3855828567838 0.0803333333333333 0.445666666666667 0.374866634553838 0.00115197144597326 0.96674647213166 6.23772064521816 Q14151 SAFB2 Q14151.S513.p_SAFB2 Q14151_S513s _1_1_513_513 Q14151 Q14151 Scaffold attachment factor B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13446.13446.5 15.85 15.85 6.119 3 1 1 0 529.7023 2564.5127 S513s TMT10 505 (K) LSSVDRHHsVEIKIEK (T) LS(0.0)S(0.0)VDRHHS(0.99)VEIKIEK K:TMT10,s:Phosphorylated S SAFB2 107985.1 17 6 83.3 629.62 HUMAN 1 4.2612 29.3856 SSVDTLLSPTALIDS-p Q00613;S326-p SSVDTLLSPTALIDS 0.850370229459707 0.477558449622212 -0.0273333333333333 0.104333333333333 1.36192742630943 4.28106087219726 -0.0273333333333333 0.104333333333333 0.730814671338965 0.373158993304201 -0.362352409348524 0.97031471078594 Q00613 HSF1 Q00613.S326.p_HSF1 Q00613_S314sS326s_2_2_314_326 Q00613 Q00613|E9PMQ6|Q00613-2 Heat shock factor protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.37381.37381.3 15.76 15.76 1.951 7 2 2 0 995.1545 2823.5098 S314s S326s Hydrogen 310 (R) VEEAsPGRPSSVDTLLsPTALIDSILR (E) VEEAS(0.99)PGRPS(0.0)S(0.0)VDT(0.0)LLS(0.99)PT(0.0)ALIDS(0.0)ILR s:Phosphorylated S HSF1 57544.7 4 8 1960.1 105.12 HUMAN 1 -1.3619 4.2811 SSVEAKDSGLESKKL-p Q9NYV4-2;S440-p SSVEAKDSGLESKKL 0.111618830719723 0.0999174356971442 0.414666666666667 -0.279666666666667 19.8997700663866 13.2232686236445 0.414666666666667 -0.279666666666667 0.010233471711142 0.0476072546213577 3.85747288983344 -2.54994976790459 Q9NYV4 CDK12 Q9NYV4.2.S440.p_CDK12 Q9NYV4-2_S440s _1_1_440_440 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9524.9524.4 10.73 10.73 10.73 4 1 1 0 676.8697 2624.4913 S440s TMT10 430 (R) KENSSVEAKDsGLESK (K) KENS(0.0)S(0.0)VEAKDS(0.99)GLES(0.0)K K:TMT10,s:Phosphorylated S CDK12 163853.1 1 21 59.1 708.76 HUMAN 1 19.8998 -13.2233 SSVIVPESDEEGHSP-p Q14676;S196-p SSVIVPESDEEGHSP 0.219716131376416 0.123269878873734 0.234666666666667 0.174666666666667 12.6680600782108 11.9926802034782 0.234666666666667 0.174666666666667 0.0540995922934182 0.0632021685348706 2.45142161916289 2.32987464857945 Q14676 MDC1 Q14676.S196.p_MDC1 Q14676_S196sS202s_2_2_196_202 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32034.32034.5 31.61 26.55 3.705 12 2 2 0 1161.3273 5642.6732 S196s S202s TMT10 186 (R) TTSSSVIVPEsDEEGHsPVLGGLGPPFAFNLNSDTDVEEGQQPATEEASSAAR (R) T(0.0)T(0.0)S(0.0)S(0.0)S(0.0)VIVPES(0.99)DEEGHS(0.99)PVLGGLGPPFAFNLNS(0.0)DT(0.0)DVEEGQQPAT(0.0)EEAS(0.0)S(0.0)AAR s:Phosphorylated S MDC1 227803.2 19 57 6.1 1662.62 HUMAN 1 12.6681 11.9927 SSVNVRLSPGKETRC-p P28290;S759-p SSVNVRLSPGKETRC 0.174396271167394 0.699048364388706 -0.435666666666667 0.0406666666666667 15.1086235692534 2.13699079173312 -0.435666666666667 0.0406666666666667 0.0308416527495494 0.611365490766518 -2.89884855112311 0.53886618296745 P28290 SSFA2 P28290.S759.p_SSFA2 P28290_S759s _1_1_759_759 P28290 P28290|P28290-3|E9PHV5|P28290-2|E7EUL7 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16880.16880.4 12.92 12.92 1.74 3 1 1 0 470.7749 1800.1107 S759s TMT10 750 (R) VVSSVNVRLsPGK (E) VVS(0.0)S(0.0)VNVRLS(0.99)PGK K:TMT10,s:Phosphorylated S SSFA2 139638.7 6 20 73.1 652.35 HUMAN 1 -15.1086 2.137 SSVPRRDSLSKTSTP-p Q2LD37;S4378-p SSVPRRDSLSKTSTP 0.207425572981327 0.442925042630083 0.279333333333333 0.187333333333333 13.1838441488913 4.71029811262278 0.279333333333333 0.187333333333333 0.0480413922775493 0.338041631228644 2.54424803733917 1.05048889140232 Q2LD37 KIAA1109 Q2LD37.S4378.p_KIAA1109 Q2LD37_S4378s _1_1_4378_4378 Q2LD37 Q2LD37|Q2LD37-4 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7546.7546.4 8.58 8.58 2.537 6 1 1 0 540.2874 2078.1606 S4378s TMT10 4367 (R) SVSDSSVPRRDsLSK (T) S(0.0)VS(0.0)DS(0.0)S(0.0)VPRRDS(0.99)LS(0.0)K K:TMT10,s:Phosphorylated S KIAA1109 559693.9 2 30 143.1 520.8 HUMAN 1 13.1838 4.7103 SSVPSSFSPNTPLPS-p Q6NUP7;S833-p SSVPSSFSPNTPLPS 0.461998274641388 0.00675606261263786 0.0986666666666667 -0.59 6.18469803142437 31.1615391075344 0.0986666666666667 -0.59 0.240729989480078 0.00076532533320572 1.31740004473273 -6.78215613381352 Q6NUP7 PPP4R4 Q6NUP7.S833.p_PPP4R4 Q6NUP7_S833s _1_1_833_833 Q6NUP7 Q6NUP7 Serine/threonine-protein phosphatase 4 regulatory subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17077.17077.3 15.77 15.77 1.114 9 1 1 0 781.379 2262.1564 S833s TMT10 824 (R) NASSVPSSFsPNTPLPSTSR (G) NAS(0.0)S(0.0)VPS(0.0)S(0.0)FS(0.99)PNT(0.0)PLPS(0.0)T(0.0)S(0.0)R s:Phosphorylated S PPP4R4 100534.2 1 3 3685.1 45.41 HUMAN 1 6.1847 -31.1615 SSVRRPMSDPSWNRR-p Q14C86-6;S941-p SSVRRPMSDPSWNRR 0.407878856431238 0.128759101279765 -0.121333333333333 -0.189 7.19146362925055 11.7390879569419 -0.121333333333333 -0.189 0.190920972146557 0.0670025303758866 -1.49448804777553 -2.28502868124479 Q14C86 GAPVD1 Q14C86.6.S941.p_GAPVD1 Q14C86-6_S941s _1_1_941_941 Q14C86-6 Q14C86-6|Q14C86-2|Q14C86-5|Q14C86-4|Q14C86-3|F8W9S7 Isoform 6 of GTPase-activating protein and VPS9 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8187.8187.3 12.49 7.95 2.661 2 1 1 0 518.9084 1474.7422 S941s TMT10 938 (R) RPMsDPSWNR (R) RPMS(0.99)DPS(0.0)WNR s:Phosphorylated S GAPVD1 167648.8 10 13 268.1 394.98 HUMAN 1 -7.1915 -11.7391 SSVRRYLSPERLASV-p O95834-2;S125-p SSVRRYLSPERLASV 0.297330507583042 0.0197549993638541 0.173666666666667 0.367666666666667 9.91581630888216 23.3872173916474 0.173666666666667 0.367666666666667 0.101957310096613 0.00458435521099705 1.9670885117386 4.64125481531282 O95834 EML2 O95834.2.S125.p_EML2 O95834-2_S125s _1_1_125_125 O95834-2 O95834-3|O95834-2|C9JRL6 Isoform 2 of Echinoderm microtubule-associated protein-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17558.17558.3 11.91 11.91 6.688 3 1 1 0 533.9528 1519.8794 S125s TMT10 123 (R) YLsPERLASVR (R) Y(0.0)LS(0.99)PERLAS(0.0)VR s:Phosphorylated S EML2 87610.1 3 3 3361.1 52.88 HUMAN 1 9.9158 23.3872 SSVSTKESPARKAAP-p E7ETY2;S233-p SSVSTKESPARKAAP 0.33341610353663 0.0173454724453883 0.204666666666667 -0.570666666666667 8.90387471144185 24.2911169410522 0.204666666666667 -0.570666666666667 0.12871007069728 0.00372295944940669 1.79172312317969 -4.86060645027244 E7ETY2 TCOF1 E7ETY2.S233.p_TCOF1 E7ETY2_S233s _1_1_233_233 E7ETY2 Q13428-4|Q13428-3|E7ETY2|Q13428-7|Q13428-6|Q13428-5 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.4978.4978.3 11.16 6.01 1.892 5 1 1 0 586.6446 1677.9536 S233s TMT10 225 (K) ASSVSTKEsPAR (K) AS(0.0)S(0.0)VS(0.0)T(0.0)KES(0.99)PAR K:TMT10,s:Phosphorylated S TCOF1 152529.5 7 5 19.1 1034.65 HUMAN 1 8.9039 -24.2911 SSVTPSPTPENEKQP-p Q92870-4;T344-p SSVTPSPTPENEKQP 0.297330507583042 0.815433012148271 0.149666666666667 -0.025 9.91193490442552 1.23934465144062 0.149666666666667 -0.025 0.10204847276792 0.751736322156915 1.96641452043211 -0.332849017556251 Q92870 APBB2 Q92870.4.T344.p_APBB2 Q92870-4_T344t _1_1_344_344 Q92870-4 Q92870-4 Isoform 4 of Amyloid-beta A4 precursor protein-binding family B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27765.27828.4 15.92 11.53 1.112 7 1 1 0 949.9933 3716.9739 T344t TMT10 334 (K) GSLSSVTPSPtPENEKQPWSDFAVLNGGK (I) GS(0.0)LS(0.0)S(0.0)VT(0.0)PS(0.0)PT(0.99)PENEKQPWS(0.0)DFAVLNGGK K:TMT10,t:Phosphorylated T APBB2 84356.2 1 14 667.1 249.66 HUMAN 1 9.9119 -1.2393 SSWAKNGSYQGALHN-p Q6GYQ0-2;S503-p SSWAKNGSYQGALHN 0.67809624780648 0.211432893164682 0.0556666666666667 -0.131 3.15741211110074 8.87802878431294 0.0556666666666667 -0.131 0.483346734559129 0.129478339627879 0.752207082932161 -1.78661603863448 Q6GYQ0 RALGAPA1 Q6GYQ0.2.S503.p_RALGAPA1 Q6GYQ0-2_S503s_1_1_503_503 Q6GYQ0-2 Q6GYQ0-3|A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15487.15487.4 16.15 16.15 0 6 1 1 0 876.1688 3420.6933 N501n S503s TMT10 495 (R) NSSWAKnGsYQGALHNASEEATEQNIR (A) N(0.50)S(0.0)S(0.0)WAKN(0.50)GS(0.99)Y(0.0)QGALHN(0.0)AS(0.0)EEAT(0.0)EQN(0.0)IR K:TMT10,n:Deamidated,s:Phosphorylated S RALGAPA1 236609.9 1 2 317.1 366.49 HUMAN 1 3.1574 -8.878 SSWDKNGSPNKQPSS-p Q5JSZ5;S907-p SSWDKNGSPNKQPSS 0.816162932725909 0.00309831083212838 -0.0353333333333333 -0.849333333333333 1.69353239712711 37.6907278338519 -0.0353333333333334 -0.849333333333333 0.677090562156975 0.000170187326765889 -0.439809669962813 -9.13965272271297 Q5JSZ5 PRRC2B Q5JSZ5.S907.p_PRRC2B Q5JSZ5_S907s _1_1_907_907 Q5JSZ5 Q5JSZ5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11771.11771.4 16.75 16.75 2.189 4 1 1 0 669.5779 2595.3204 S907s TMT10 905 (K) NGsPNKQPSSEPEWTPEPR (S) NGS(0.99)PNKQPS(0.0)S(0.0)EPEWT(0.0)PEPR K:TMT10,s:Phosphorylated S PRRC2B 244103.4 5 67 36.2 882.05 HUMAN 1 -1.6935 -37.6907 SSWDQAETPGHTPSL-p O75533;T223-p SSWDQAETPGHTPSL 0.233628206047255 0.845376311681427 0.185666666666667 0.0196666666666667 12.1071822900215 1.02577509124997 0.185666666666667 0.0196666666666667 0.0615576130015642 0.789627910859694 2.35136025413753 0.280303694052778 O75533 SF3B1 O75533.T223.p_SF3B1 O75533_T223t _1_1_223_223 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13861.14184.4 20.81 18.24 6.498 5 1 1 0 637.829 2468.3298 T223t TMT10 214 (K) KLSSWDQAEtPGHTPSLR (W) KLS(0.0)S(0.0)WDQAET(0.99)PGHT(0.0)PS(0.0)LR K:TMT10,t:Phosphorylated T SF3B1 146569.5 7 11 53.1 735.77 HUMAN 1 12.1072 1.0258 SSWQRKGSPERLKVM-p O94903;S135-p SSWQRKGSPERLKVM 0.703545989174049 0.925692197060713 0.083 0.0370000000000001 2.8701212764608 0.473794048170359 0.083 0.0370000000000001 0.516401948578803 0.89664513240618 0.69390670993746 0.136110060411193 O94903 PROSC O94903.S135.p_PROSC O94903_S135s _1_1_135_135 O94903 O94903 Pyridoxal phosphate homeostasis protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7135.7135.4 7.42 3.74 99 1 1 1 0 421.2545 1602.0306 S135s TMT10 133 (R) KGsPERLK (V) KGS(1.0)PERLK K:TMT10,s:Phosphorylated S PLPBP 30628.6 2 2 3344.1 53.27 HUMAN 1 2.8701 0.4738 SSYEEPLSPISASSS-p Q8IXK0-5;S752-p SSYEEPLSPISASSS 0.134150744259901 0.231139332504397 0.702333333333333 -0.167666666666667 17.9520184288273 8.37913657533143 0.702333333333333 -0.167666666666667 0.0160250043882578 0.145240034187186 3.4525612648711 -1.70030922521163 Q8IXK0 PHC2 Q8IXK0.5.S752.p_PHC2 Q8IXK0-5_S752s _1_1_752_752 Q8IXK0-5 Q8IXK0-5|A0A0A0MSI2|Q8IXK0-4|B3KPJ4 Isoform 5 of Polyhomeotic-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14898.14898.3 19.84 19.84 4.872 11 1 1 0 890.7203 2590.1776 S752s TMT10 741 (R) CSDNSSYEEPLsPISASSSTSR (R) CS(0.0)DNS(0.0)S(0.0)Y(0.0)EEPLS(0.99)PIS(0.0)AS(0.0)S(0.0)S(0.0)T(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S PHC2 91495.3 1 3 2433.1 83.58 HUMAN 1 17.952 -8.3791 SSYGITKSLENIYSE-p Q68D51;S190-p SSYGITKSLENIYSE 0.200655579876407 0.0890744971534867 -0.241666666666667 -0.197333333333333 13.5615833076337 13.8998462565685 -0.241666666666667 -0.197333333333333 0.0440394279669322 0.0407394699619967 -2.61277075474885 -2.67295889477092 Q68D51 DENND2C Q68D51.S190.p_DENND2C Q68D51_S190s_1_1_190_190 Q68D51 Q68D51|Q68D51-3|Q68D51-2 DENN domain-containing protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21898.21898.5 16.53 16.53 1.212 4 1 1 0 670.9362 3269.6876 S190s N193n TMT10 190 (K) sLEnIYSEPEGQECGPSINPLPKPR (R) S(0.99)LEN(0.99)IY(0.0)S(0.0)EPEGQECGPS(0.0)IN(0.0)PLPKPR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated DENND2C 108175.7 1 1 2738.1 72.24 HUMAN 1 -13.5616 -13.8998 STAENAEYLRVAPQS-p P00533;Y1197-p STAENAEYLRVAPQS 0.74587727060098 0.110148211194914 0.052 0.241333333333333 2.4163213407869 12.652666972725 0.052 0.241333333333333 0.573281419160732 0.0542916827589239 0.599145575441457 2.44736357664656 P00533 EGFR P00533.Y1197.p_EGFR P00533_Y1197y _1_1_1197_1197 P00533 P00533|E9PFD7 Epidermal growth factor receptor GG20160819_MSz_CCLE_T4D7_pY_Injection_02.9073.9073.2 13.32 7.63 11.168 3 1 1 0 760.3536 1439.7328 Y1197y TMT10 1189 (K) GSTAENAEyLR (V) GS(0.0)T(0.0)AENAEY(0.99)LR y:Phosphorylated Y EGFR 137698.3 2 1 262.1 13.32 HUMAN 1 2.4163 12.6527 STAITPGTPPSYSSR-p P11137;T1605-p STAITPGTPPSYSSR 0.55585356390276 0.0087175975018043 0.0896666666666667 0.534 4.70911854700916 29.2024855586926 0.0896666666666667 0.534 0.338133457502266 0.00120157655025077 1.05047241634942 6.18364026581784 P11137 MAP2 P11137.T1605.p_MAP2 P11137_T1605t _1_1_1605_1605 P11137 P11137|P11137-3|P11137-4|P11137-2 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13129.13335.3 22.35 22.35 1.178 14 1 1 0 906.4351 2637.3205 T1605t TMT10 1588 (K) SGTSTPTTPGSTAITPGtPPSYSSR (T) S(0.0)GT(0.0)S(0.0)T(0.0)PT(0.0)T(0.0)PGS(0.0)T(0.0)AIT(0.0)PGT(0.99)PPS(0.0)Y(0.0)S(0.0)S(0.0)R t:Phosphorylated T MAP2 199979.2 4 13 117.1 560.28 HUMAN 1 4.7091 29.2025 STAKVPASPLPGLER-p E9PC69;S455-p STAKVPASPLPGLER 0.293047227537117 0.0386745972221711 0.227 -0.308 10.0583734647273 18.9705675233627 0.227 -0.308 0.0986648939742488 0.0126748622363221 1.99185378111228 -3.65822244848008 E9PC69 NotFound E9PC69.S455.p_NotFound E9PC69_S455s _1_1_455_455 E9PC69 Q7KZI7|Q7KZI7-8|E9PC69|Q7KZI7-11|Q7KZI7-6|Q7KZI7-3|Q7KZI7-14|Q7KZI7-12|Q7KZI7-9|Q7KZI7-4|Q7KZI7-16|Q7KZI7-5|Q7KZI7-15|Q7KZI7-2|E7ETY4|Q7KZI7-7|Q7KZI7-13|Q7KZI7-10 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16287.16287.3 17.32 13.77 7.66 4 1 1 0 740.412 2139.2538 S455s TMT10 446 (K) ASSTAKVPAsPLPGLER (K) AS(0.0)S(0.0)T(0.0)AKVPAS(0.99)PLPGLER K:TMT10,s:Phosphorylated S MARK2 87089.2 8 9 200.1 451.67 HUMAN 1 10.0584 -18.9706 STAKWAASLENLLED-p O43665-3;S41-p STAKWAASLENLLED 0.219143555312821 0.41122762100758 -0.222666666666667 0.095 12.6965108058946 5.13412366332109 -0.222666666666667 0.095 0.0537463430015715 0.306610930874019 -2.45652090080673 1.12834783313509 O43665 RGS10 O43665.3.S41.p_RGS10 O43665-3_S41s _1_1_41_41 O43665-3 O43665-3|O43665-2 Isoform 3 of Regulator of G-protein signaling 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.35041.35041.3 18.41 18.41 99 1 1 1 0 770.3994 2229.2167 S41s TMT10 38 (K) WAAsLENLLEDPEGVK (R) WAAS(1.0)LENLLEDPEGVK K:TMT10,s:Phosphorylated S RGS10 21266.6 4 2 3879.1 41.42 HUMAN 1 -12.6965 5.1341 STALYGESDL_____-p O43707;S909-p STALYGESDL_____ 0.732725172885021 0.151435219300912 -0.0643333333333333 0.150333333333333 2.55634264880461 10.7798671822006 -0.0643333333333334 0.150333333333333 0.555092980090908 0.0835628573391581 -0.628764363403572 2.11665472616598 O43707 ACTN4 O43707.S909.p_ACTN4 O43707_S909s _1_1_909_909 O43707 O43707|O43707-2|O43707-3|F5GXS2 Alpha-actinin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27402.27402.2 7.68 7.68 2.215 5 1 1 0 799.8654 1518.7525 S909s TMT10 900 (K) SFSTALYGEsDL (-) S(0.0)FS(0.0)T(0.0)ALY(0.0)GES(0.99)DL s:Phosphorylated S ACTN4 105308.6 1 10 1097.1 178.17 HUMAN 1 -2.5563 10.7799 STAPAEATPPKPGEA-p O95817;T406-p STAPAEATPPKPGEA 0.195954837597201 0.112146275073429 -0.349666666666667 0.185333333333333 13.7952654820046 12.5394027131643 -0.349666666666667 0.185333333333333 0.0417324086876714 0.0557262384167426 -2.6554052742575 2.42711584509768 O95817 BAG3 O95817.T406.p_BAG3 O95817_T406t _1_1_406_406 O95817 O95817 BAG family molecular chaperone regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12733.12940.3 21.72 15.47 3.349 3 1 1 0 984.8601 2872.6023 T406t TMT10 396 (R) AAPSTAPAEAtPPKPGEAEAPPK (H) AAPS(0.0)T(0.0)APAEAT(0.99)PPKPGEAEAPPK K:TMT10,t:Phosphorylated T BAG3 61764.7 6 14 416.1 321.05 HUMAN 1 -13.7953 12.5394 STAPKTPSLSSTQPT-p Q9H1K0;S590-p STAPKTPSLSSTQPT 0.995222800843425 0.901459232468312 0.001 0.0133333333333334 0.0390255619638343 0.628361474733223 0.001 0.0133333333333334 0.991054285424198 0.865294319234326 0.0117392790206901 0.177853026609118 Q9H1K0 RBSN Q9H1K0.S590.p_RBSN Q9H1K0_S590s _1_1_590_590 Q9H1K0 Q9H1K0 Rabenosyn-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8381.8381.2 10.2 4.38 1.244 6 1 1 0 742.3712 1403.7692 S590s TMT10 588 (K) TPsLSSTQPTR (V) T(0.0)PS(0.99)LS(0.0)S(0.0)T(0.0)QPT(0.0)R s:Phosphorylated S RBSN 89666.9 3 6 972.1 193.2 HUMAN 1 0.039 0.6284 STARPSESSEEFLEE-p Q9Y6X4;S378-p STARPSESSEEFLEE 0.2861082613719 0.0222900612720957 0.169 0.364 10.2542467902261 22.5635921685413 0.169 0.364 0.0943138168520385 0.00554167156517123 2.02591849695866 4.44715336052855 Q9Y6X4 FAM169A Q9Y6X4.S378.p_FAM169A Q9Y6X4_S378s _1_1_378_378 Q9Y6X4 Q9Y6X4|D6RB01 Soluble lamin-associated protein of 75 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16324.16324.3 18.26 18.26 1.124 5 1 1 0 963.4413 2808.3373 S378s TMT10 369 (K) LESTARPSEsSEEFLEEEPEQR (G) LES(0.0)T(0.0)ARPS(0.0)ES(0.99)S(0.0)EEFLEEEPEQR s:Phosphorylated S FAM169A 75295.8 3 5 731.1 236 HUMAN 1 10.2542 22.5636 STASRSNSLVSTFTM-p Q9HB21;S332-p STASRSNSLVSTFTM 0.94845277588196 0.953839824660711 -0.0113333333333333 0.0103333333333334 0.456108404698799 0.292324536458411 -0.0113333333333333 0.0103333333333334 0.900303958198206 0.934905137559161 -0.13127041554738 0.0855358769632591 Q9HB21 PLEKHA1 Q9HB21.S332.p_PLEKHA1 Q9HB21_S332s _1_1_332_332 Q9HB21 Q9HB21 Pleckstrin homology domain-containing family A member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24738.24738.3 10.19 10.19 1.1 5 1 1 0 627.9865 1801.977 S332s TMT10 330 (R) SNsLVSTFTMEK (R) S(0.0)NS(0.99)LVS(0.0)T(0.0)FT(0.0)MEK K:TMT10,s:Phosphorylated S PLEKHA1 45952.1 1 3 4156.1 36.55 HUMAN 1 -0.4561 0.2923 STATKIHSPIPDMSK-p Q6NZY4;S658-p STATKIHSPIPDMSK 0.313971211592659 0.589070218815975 -0.144 0.0656666666666667 9.41197717532971 3.10691042756096 -0.144 0.0656666666666667 0.114499155226284 0.489000110479931 -1.87970535875839 0.741938320881781 Q6NZY4 ZCCHC8 Q6NZY4.S658.p_ZCCHC8 Q6NZY4_S658s _1_1_658_658 Q6NZY4 Q6NZY4|Q6NZY4-2 Zinc finger CCHC domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15430.15430.2 13.79 10.52 5.052 2 1 1 0 831.9379 1582.9027 S658s TMT10 656 (K) IHsPIPDMSK (F) IHS(0.99)PIPDMS(0.0)K K:TMT10,s:Phosphorylated S ZCCHC8 79203.5 9 14 443.1 311.3 HUMAN 1 -9.412 3.1069 STATRDISLDSELHD-p Q15643;S464-p STATRDISLDSELHD 0.30358891299626 0.0278810327469769 -0.210333333333333 -0.371333333333333 9.6980098072427 21.0672807593712 -0.210333333333333 -0.371333333333333 0.10720104509347 0.00782117357117202 -1.92928887491322 -4.10772851213256 Q15643 TRIP11 Q15643.S464.p_TRIP11 Q15643_S464s _1_1_464_464 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21124.21124.3 20.02 20.02 3.879 2 1 1 0 574.6154 1641.8645 S464s TMT10 462 (R) DIsLDSELHDLR (L) DIS(0.99)LDS(0.0)ELHDLR s:Phosphorylated S TRIP11 228267 5 5 463.1 303.86 HUMAN 1 -9.698 -21.0673 STATSHRSLSPQLLQ-p Q9UPX8-3;S444-p STATSHRSLSPQLLQ 0.769111039821672 0.718557965143023 -0.058 0.035 2.18683880896804 1.97651325041684 -0.058 0.035 0.604388398261995 0.634378820281497 -0.549792476953774 0.503536215250578 Q9UPX8 SHANK2 Q9UPX8.3.S444.p_SHANK2 Q9UPX8-3_S444sS446s_2_2_444_446 Q9UPX8-3 Q9UPX8-3 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23708.23708.4 18.02 12.84 13.975 3 2 2 0 715.132 2697.5576 S444s S446s TMT10 444 (R) sLsPQLLQQMPSKPEGAAK (T) S(0.99)LS(0.99)PQLLQQMPS(0.0)KPEGAAK K:TMT10,s:Phosphorylated S SHANK2 202341.2 4 33 86.1 628.23 HUMAN 1 -2.1868 1.9765 STCQRANSLGDLYAQ-p Q13009;S231-p STCQRANSLGDLYAQ 0.79354197059539 0.0901418714903252 -0.038 -0.266666666666667 1.93836554169668 13.8303928949158 -0.038 -0.266666666666667 0.639975643676279 0.0413962223040643 -0.495108968007232 -2.6602584021374 Q13009 TIAM1 Q13009.S231.p_TIAM1 Q13009_S231s _1_1_231_231 Q13009 Q13009|Q13009-2 T-lymphoma invasion and metastasis-inducing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18458.18458.2 16.2 16.2 9.827 2 1 1 0 859.4492 1637.9263 S231s TMT10 229 (R) ANsLGDLYAQK (N) ANS(0.99)LGDLY(0.0)AQK K:TMT10,s:Phosphorylated S TIAM1 178817.2 3 3 1466.1 140.01 HUMAN 1 -1.9384 -13.8304 STDENTDSEEHQEPP-p P18887;S525-p STDENTDSEEHQEPP 0.141585108983502 0.1687229306464 0.261 0.155333333333333 17.3450559149753 10.164924562667 0.261 0.155333333333333 0.0184286876206888 0.0962736735649754 3.33090855894077 2.00955082186832 P18887 XRCC1 P18887.S525.p_XRCC1 P18887_T523tS525s_2_2_523_525 P18887 P18887|F5H8D7 DNA repair protein XRCC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.31829.31829.5 9.73 9.73 1.191 5 2 2 0 1095.0815 5309.4599 N510n N522n T523t S525s TMT10 503 (R) LPPGQEEnGEDPYAGSTDEntDsEEHQEPPDLPVPELPDFFQGK (H) LPPGQEEN(1.0)GEDPY(0.0)AGS(0.0)T(0.0)DEN(1.0)T(0.99)DS(0.99)EEHQEPPDLPVPELPDFFQGK K:TMT10,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S XRCC1 69817.6 6 18 433.1 315.31 HUMAN 1 17.3451 10.1649 STDEQTSSAEEDVPT-p Q8N556-2;S343-p STDEQTSSAEEDVPT 0.648120240178882 0.591248469257856 -0.0646666666666667 0.0626666666666667 3.5287240689537 3.08783373409775 -0.0646666666666667 0.0626666666666667 0.443738992627695 0.491152802649135 -0.825900044811131 0.738091200540063 Q8N556 AFAP1 Q8N556.2.S343.p_AFAP1 Q8N556-2_S342sS343s_2_2_342_343 Q8N556-2 Q8N556-2 Isoform 2 of Actin filament-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21279.21279.5 18.09 18.09 1.175 9 2 2 0 812.7909 3899.99 S342s S343s TMT10 333 (K) KKPSTDEQTssAEEDVPTCGYLNVLSNSR (W) KKPS(0.0)T(0.0)DEQT(0.0)S(0.99)S(0.99)AEEDVPT(0.0)CGY(0.0)LNVLS(0.0)NS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S AFAP1 90706.1 6 10 854.1 211.2 HUMAN 1 -3.5287 3.0878 STDLAPPSPEPPMLA-p Q5VWG9;S243-p STDLAPPSPEPPMLA 0.996421434325015 0.0271669948321718 -0.000666666666666672 0.310333333333333 0.0279431374519362 21.2452601790685 -0.000666666666666667 0.310333333333333 0.993586509614854 0.00750713078719967 -0.00841618148424581 4.14724754247623 Q5VWG9 TAF3 Q5VWG9.S243.p_TAF3 Q5VWG9_S243s _1_1_243_243 Q5VWG9 Q5VWG9 Transcription initiation factor TFIID subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.32170.32170.5 24.21 24.21 10.505 4 1 1 0 754.7998 3690.0051 S243s TMT10 224 (K) IPPMLSPVHVQDSTDLAPPsPEPPMLAPVAK (S) IPPMLS(0.0)PVHVQDS(0.0)T(0.0)DLAPPS(0.99)PEPPMLAPVAK K:TMT10,s:Phosphorylated S TAF3 104321.6 2 4 699.1 240.69 HUMAN 1 -0.0279 21.2453 STDPFPGSPAIPAEK-p Q6P9B9;S279-p STDPFPGSPAIPAEK 0.340652587960436 0.0090396054976354 0.137 0.442 8.69848904600844 28.9216469884653 0.137 0.442 0.134943228193627 0.00128184437264188 1.75617081299763 6.10140812608977 Q6P9B9 INTS5 Q6P9B9.S279.p_INTS5 Q6P9B9_S279s _1_1_279_279 Q6P9B9 Q6P9B9 Integrator complex subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19887.19887.4 17.17 12.14 3.919 9 1 1 0 1018.2244 3989.8976 S279s TMT10 249 (K) DFCVHGGAGGGAGSSGGSSSQTPSTDPFPGsPAIPAEK (R) DFCVHGGAGGGAGS(0.0)S(0.0)GGS(0.0)S(0.0)S(0.0)QT(0.0)PS(0.0)T(0.0)DPFPGS(0.99)PAIPAEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S INTS5 109305.5 2 1 4740.1 27.25 HUMAN 1 8.6985 28.9216 STDREGASPVTEVRI-p Q9ULJ3;S422-p STDREGASPVTEVRI 0.120038010973547 0.106373117431212 0.378666666666667 0.175333333333333 19.1390334534175 12.8558295905023 0.378666666666667 0.175333333333333 0.0121926092204739 0.0518104114165127 3.69656536872738 2.48377563811622 Q9ULJ3 ZBTB21 Q9ULJ3.S422.p_ZBTB21 Q9ULJ3_S422s _1_1_422_422 Q9ULJ3 Q9ULJ3|Q9ULJ3-2 Zinc finger and BTB domain-containing protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9839.9839.3 16.6 13.59 1.471 7 1 1 0 807.3817 2340.1629 S422s TMT10 409 (R) SFSASQSTDREGAsPVTEVR (I) S(0.0)FS(0.0)AS(0.0)QS(0.0)T(0.0)DREGAS(0.99)PVT(0.0)EVR s:Phosphorylated S ZBTB21 120636.9 2 3 692.1 242.92 HUMAN 1 19.139 12.8558 STDRHSLSLDDIRLY-p Q96NE9;S544-p STDRHSLSLDDIRLY 0.189321324337386 0.161790251040459 0.224666666666667 0.218333333333333 14.1570485669924 10.4022883877679 0.224666666666667 0.218333333333333 0.0383968098710227 0.0911530408500452 2.72179868585529 2.05082944358901 Q96NE9 FRMD6 Q96NE9.S544.p_FRMD6 Q96NE9_S544s _1_1_544_544 Q96NE9 Q96NE9|Q96NE9-2|G3V4T7|Q96NE9-3 FERM domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20083.20083.4 13.95 13.95 1.269 3 1 1 0 532.2914 2046.1748 S544s TMT10 541 (R) HSLsLDDIRLYQK (D) HS(0.0)LS(0.99)LDDIRLY(0.0)QK K:TMT10,s:Phosphorylated S FRMD6 72898.5 10 5 1456.1 140.48 HUMAN 1 14.157 10.4023 STDSAVASPQRIQIV-p P49116;S19-p STDSAVASPQRIQIV 0.918974244252321 0.00815813217337322 0.015 -0.464 0.715191801356635 29.74168462112 0.015 -0.464 0.848165923314917 0.00106128380710993 0.20082787506543 -6.34397215003788 P49116 NR2C2 P49116.S19.p_NR2C2 P49116_S19s _1_1_19_19 P49116 P49116 Nuclear receptor subfamily 2 group C member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24387.24387.4 22.4 22.4 1.239 6 1 1 0 866.7182 3383.8899 S19s TMT10 8 (R) IQIISTDSAVAsPQRIQIVTDQQTGQK (I) IQIIS(0.0)T(0.0)DS(0.0)AVAS(0.99)PQRIQIVT(0.0)DQQT(0.0)GQK K:TMT10,s:Phosphorylated S NR2C2 66269.1 4 1 993.1 191.1 HUMAN 1 0.7152 -29.7417 STDVPEKSSLFHQGG-p Q8NFH3;S299-p STDVPEKSSLFHQGG 0.510291527209637 0.6705104664401 0.186333333333333 -0.0846666666666667 5.39847982478208 2.37228323588154 0.186333333333333 -0.0846666666666667 0.288504118683311 0.57912415083848 1.17660628989996 -0.589681425446016 Q8NFH3 NUP43 Q8NFH3.S299.p_NUP43 Q8NFH3_S299s _1_1_299_299 Q8NFH3 Q8NFH3|Q8NFH3-2 Nucleoporin Nup43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9507.9507.3 9.14 9.14 1.16 2 1 1 0 433.2136 1217.6588 S299s TMT10 299 (K) sSLFHQGGR (S) S(0.99)S(0.0)LFHQGGR s:Phosphorylated S NUP43 42606.5 1 1 6124.1 13.79 HUMAN 1 5.3985 -2.3723 STEADTDTPKKLMFR-p Q9BYW2;T1872-p STEADTDTPKKLMFR 0.0999757381136509 0.00190404013065414 -0.307 -1.11033333333333 21.1689426932266 42.6473548412163 -0.307 -1.11033333333333 0.00764021765002079 5.43581309929143e-05 -4.13443085239613 -11.3886645475808 Q9BYW2 SETD2 Q9BYW2.T1872.p_SETD2 Q9BYW2_T1872t _1_1_1872_1872 Q9BYW2 Q9BYW2|A0A1W2PPX9 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11026.11026.2 13.39 8.62 1.144 4 1 1 0 858.4293 1635.8842 T1872t TMT10 1864 (K) LSTEADTDtPK (K) LS(0.0)T(0.0)EADT(0.0)DT(0.99)PK K:TMT10,t:Phosphorylated T SETD2 290615.4 5 23 58.1 711.11 HUMAN 1 -21.1689 -42.6474 STEDGDGTDDFLTDK-p Q15527;T190-p STEDGDGTDDFLTDK 0.28296354989842 0.185596054073023 -0.191333333333333 0.186666666666667 10.365029333907 9.61778981572488 -0.191333333333333 0.186666666666667 0.0919384264910758 0.10919959267903 -2.04520607166293 1.91463588911596 Q15527 SURF2 Q15527.T190.p_SURF2 Q15527_T190t _1_1_190_190 Q15527 Q15527 Surfeit locus protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19512.19912.3 24.4 24.4 3.149 4 1 1 0 1057.1561 3089.4889 T190t TMT10 180 (K) DLGSTEDGDGtDDFLTDKEDEK (A) DLGS(0.0)T(0.0)EDGDGT(0.99)DDFLT(0.0)DKEDEK K:TMT10,t:Phosphorylated T SURF2 30103.5 2 4 1281.1 158.83 HUMAN 1 -10.365 9.6178 STEQTLLSPSEKPRR-p Q8WV44;S571-p STEQTLLSPSEKPRR 0.92503534198716 0.579250796400616 -0.0173333333333334 -0.06 0.666650731160924 3.20042915264932 -0.0173333333333334 -0.06 0.857699045728047 0.478582798324584 -0.188035676073578 -0.760724907986513 Q8WV44 TRIM41 Q8WV44.S571.p_TRIM41 Q8WV44_S571s _1_1_571_571 Q8WV44 Q8WV44|Q8WV44-3 E3 ubiquitin-protein ligase TRIM41 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11178.11178.4 8.51 8.51 2 7 1 1 0 711.8726 2764.4994 S571s TMT10 558 (K) RYQAQSSTEQTLLsPSEKPR (R) RY(0.0)QAQS(0.0)S(0.0)T(0.0)EQT(0.0)LLS(0.99)PS(0.0)EKPR K:TMT10,s:Phosphorylated S TRIM41 72752.7 1 2 3858.1 41.62 HUMAN 1 -0.6667 -3.2004 STESIPVSDEDSDAM-p A6NHB5;S265-p STESIPVSDEDSDAM 0.743332697084522 0.0225218320710093 0.0523333333333333 0.331666666666667 2.44634320520733 22.4998073110287 0.0523333333333333 0.331666666666667 0.569332111338054 0.00562366275858571 0.605526477192839 4.43234296967116 A6NHB5 NotFound A6NHB5.S265.p_NotFound A6NHB5_S265s _1_1_265_265 A6NHB5 A6NHB5|Q14202|Q14202-2|A6NHN7|A6NL54|Q14202-3 Zinc finger MYM-type protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22508.22508.5 32.48 28.71 3.366 5 1 1 0 1028.2889 5057.4363 S265s TMT10 247 (R) RAEPPKPEVVDSTESIPVsDEDSDAMVDDPNDEDFVPFRPR (R) RAEPPKPEVVDS(0.0)T(0.0)ES(0.0)IPVS(0.99)DEDS(0.0)DAMVDDPNDEDFVPFRPR K:TMT10,s:Phosphorylated S ZMYM3 156426.3 4 5 331.1 357.99 HUMAN 1 2.4463 22.4998 STFDAHIYEGRVIQI-p Q05655;Y64-p STFDAHIYEGRVIQI 0.348394754051403 0.542950045023771 0.153 -0.136333333333333 8.51052043395356 3.56810671288444 0.153 -0.136333333333333 0.14091199273384 0.439733273386642 1.72362826964202 -0.833486478580035 Q05655 PRKCD Q05655.Y64.p_PRKCD Q05655_Y64y _1_1_64_64 Q05655 Q05655-2 Protein kinase C delta type GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12577.12577.3 11.29 11.29 11.294 3 1 1 0 535.5826 1524.7644 Y64y TMT10 57 (K) STFDAHIyEGR (V) S(0.0)T(0.0)FDAHIY(0.99)EGR y:Phosphorylated Y PRKCD 78701.8 1 1 10.1 97.65 HUMAN 1 8.5105 -3.5681 STFLAFPSPEKLLRL-p P46060;S442-p STFLAFPSPEKLLRL 0.649915547133958 0.00700007098176202 0.064 -0.623666666666667 3.50975781776447 30.8832014474483 0.064 -0.623666666666667 0.445681100897455 0.000815980640888735 0.822177276047448 -6.69438121668206 P46060 RANGAP1 P46060.S442.p_RANGAP1 P46060_S442s _1_1_442_442 P46060 P46060 Ran GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36683.36683.3 25.59 25.59 3.003 6 1 1 0 1276.9949 3749.009 S442s TMT10 414 (K) ILDPNTGEPAPVLSSPPPADVSTFLAFPsPEK (L) ILDPNT(0.0)GEPAPVLS(0.0)S(0.0)PPPADVS(0.0)T(0.0)FLAFPS(0.99)PEK K:TMT10,s:Phosphorylated S RANGAP1 63997.2 13 5 2420.1 84.21 HUMAN 1 3.5098 -30.8832 STFPEELSPPSHQAK-p Q14980;S169-p STFPEELSPPSHQAK 0.363419774329538 0.920823109707141 -0.137666666666667 -0.0163333333333333 8.16093208842105 0.503607398886648 -0.137666666666667 -0.0163333333333333 0.152723824521862 0.890510941919121 -1.66306704158329 -0.144252950628616 Q14980 NUMA1 Q14980.S169.p_NUMA1 Q14980_S169s _1_1_169_169 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-3|Q14980-4|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15055.15268.5 22.99 22.99 3.194 7 1 1 0 630.5173 3068.5875 S169s TMT10 154 (K) APVPSTCSSTFPEELsPPSHQAKR (E) APVPS(0.0)T(0.0)CS(0.0)S(0.0)T(0.0)FPEELS(0.99)PPS(0.0)HQAKR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NUMA1 239339.3 17 1 31.1 900.97 HUMAN 1 -8.1609 -0.5036 STFRPHDSFPKSGKS-p Q9P206-3;S156-p STFRPHDSFPKSGKS 0.132031969629553 0.00759424447007243 -0.264666666666667 -0.490333333333333 18.1587714553651 30.2676415373427 -0.264666666666667 -0.490333333333333 0.0152799824161348 0.000940233771628677 -3.49446909683136 -6.50353940295946 Q9P206 KIAA1522 Q9P206.3.S156.p_KIAA1522 Q9P206-3_S156s _1_1_156_156 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10885.10885.3 12.93 12.93 3.715 3 1 1 0 638.6603 1834.0012 S156s TMT10 148 (K) GSTFRPHDsFPK (S) GS(0.0)T(0.0)FRPHDS(0.99)FPK K:TMT10,s:Phosphorylated S KIAA1522 108782.6 7 6 62.1 704.36 HUMAN 1 -18.1588 -30.2676 STGDAIKTWRFSNMK-p Q96AC1-3;T613-p STGDAIKTWRFSNMK 0.495901315517715 0.200624238943548 -0.112333333333333 0.166 5.60847234691476 9.17858014418175 -0.112333333333333 0.166 0.274886090896653 0.120820877493129 -1.21448792324188 1.83860466231081 Q96AC1 FERMT2 Q96AC1.3.T613.p_FERMT2 Q96AC1-3_T613t _1_1_613_613 Q96AC1-3 Q96AC1-3|Q96AC1-2 Isoform 3 of Fermitin family homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15321.15321.3 9.08 9.08 2.552 3 1 1 0 664.0031 1910.0206 T613t TMT10 603 (R) MDASTGDAIKtWR (F) MDAS(0.0)T(0.0)GDAIKT(0.99)WR K:TMT10,t:Phosphorylated T FERMT2 79301.6 1 7 1095.1 178.25 HUMAN 1 -5.6085 9.1786 STGERKGSWSERRNS-p Q96N67-6;S432-p STGERKGSWSERRNS 0.0404299711718947 0.0393465291354279 -0.814 -0.286333333333333 31.1987528966547 18.8551367962657 -0.814 -0.286333333333333 0.000758795436529221 0.0130162631565155 -6.80530195047098 -3.63428888839777 Q96N67 DOCK7 Q96N67.6.S432.p_DOCK7 Q96N67-6_S432s _1_1_432_432 Q96N67-6 Q96N67|Q96N67-6|Q96N67-2|Q96N67-5|Q96N67-3|Q96N67-4|Q96N67-7|A0A1B0GUE9 Isoform 6 of Dedicator of cytokinesis protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7166.7166.2 7.61 4.31 7.61 2 1 1 0 694.3611 1307.7472 S432s TMT10 430 (R) KGsWSER (R) KGS(0.99)WS(0.0)ER K:TMT10,s:Phosphorylated S DOCK7 243551.1 3 8 345.1 352.4 HUMAN 1 -31.1988 -18.8551 STGFQIPSQELASQI-p Q9Y2X9;S807-p STGFQIPSQELASQI 0.292579056536687 0.0500384684317076 0.413 -0.284 10.0692862807074 17.388401318074 0.413 -0.284 0.0984172831376216 0.0182456722036896 1.99375047320509 -3.33691398157132 Q9Y2X9 ZNF281 Q9Y2X9.S807.p_ZNF281 Q9Y2X9_S807s _1_1_807_807 Q9Y2X9 Q9Y2X9|Q9Y2X9-2 Zinc finger protein 281 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25435.25435.4 12.17 12.17 3.634 5 1 1 0 917.2222 3585.8801 S807s TMT10 796 (K) NLESSTGFQIPsQELASQIDPQKDIEPR (T) NLES(0.0)S(0.0)T(0.0)GFQIPS(0.99)QELAS(0.0)QIDPQKDIEPR K:TMT10,s:Phosphorylated S ZNF281 97654.7 1 15 1522.1 134.23 HUMAN 1 10.0693 -17.3884 STGKPPLSVEDDFEK-p O75152;S768-p STGKPPLSVEDDFEK 0.367277640643147 0.0736827252619868 -0.174666666666667 0.234666666666667 8.07360726520305 15.0374394773229 -0.174666666666667 0.234666666666667 0.155825767086715 0.0313513359828465 -1.6479271487383 2.88358850573967 O75152 ZC3H11A O75152.S768.p_ZC3H11A O75152_S768s _1_1_768_768 O75152 O75152|A0A1B0GUI2|A0A1B0GTU1 Zinc finger CCCH domain-containing protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22226.22226.3 15.35 10.65 6.363 5 1 1 0 925.4863 2694.4805 S768s TMT10 757 (R) LSSASTGKPPLsVEDDFEK (L) LS(0.0)S(0.0)AS(0.0)T(0.0)GKPPLS(0.99)VEDDFEK K:TMT10,s:Phosphorylated S ZC3H11A 89985.3 3 9 890.1 204.63 HUMAN 1 -8.0736 15.0374 STGNSASTPQSQCLP-p Q9UJX3;T126-p STGNSASTPQSQCLP 0.827259472259371 0.0523129471927482 -0.0366666666666667 -0.238333333333333 1.58528403866111 17.0993296957368 -0.0366666666666667 -0.238333333333333 0.694179199300203 0.0195014556835655 -0.414867209664976 -3.2797069264715 Q9UJX3 ANAPC7 Q9UJX3.T126.p_ANAPC7 Q9UJX3_T126t _1_1_126_126 Q9UJX3 Q9UJX3|Q9UJX3-2 Anaphase-promoting complex subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16179.16179.4 8.2 8.2 1.173 7 1 1 0 778.3948 3030.593 T126t TMT10 116 (K) VRPSTGNSAStPQSQCLPSEIEVK (Y) VRPS(0.0)T(0.0)GNS(0.0)AS(0.0)T(0.99)PQS(0.0)QCLPS(0.0)EIEVK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ANAPC7 67481.9 1 2 6433.1 11.72 HUMAN 1 -1.5853 -17.0993 STGPSPGSPTLDIDQ-p Q68CZ2;S690-p STGPSPGSPTLDIDQ 0.862721178211236 0.385670052373348 -0.0353333333333333 -0.09 1.25105771489392 5.50094208424822 -0.0353333333333333 -0.09 0.749711596444884 0.281777162572995 -0.335719830548449 -1.19485545606551 Q68CZ2 TNS3 Q68CZ2.S690.p_TNS3 Q68CZ2_S690s_1_1_690_690 Q68CZ2 Q68CZ2|Q68CZ2-2 Tensin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31622.31929.4 31.11 30.85 1.122 6 1 1 0 1001.4852 3921.9668 N676n S690s TMT10 669 (R) FPGDQVVnGAGPELSTGPSPGsPTLDIDQSIEQLNR (L) FPGDQVVN(0.99)GAGPELS(0.0)T(0.0)GPS(0.0)PGS(0.99)PT(0.0)LDIDQS(0.0)IEQLN(0.0)R n:Deamidated,s:Phosphorylated S TNS3 156460.9 14 7 183.1 477.16 HUMAN 1 -1.2511 -5.5009 STGPSSRSPSTLLPK-p E7EVA0;S1970-p STGPSSRSPSTLLPK 0.98509006361184 0.0103967701171802 0.00333333333333334 -0.457333333333333 0.131707660854739 27.8382514348646 0.00333333333333334 -0.457333333333333 0.970128434400026 0.00164503391674722 0.0392106804969329 -5.79211291443561 E7EVA0 NotFound E7EVA0.S1970.p_NotFound E7EVA0_S1970s _1_1_1970_1970 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2|P27816-4 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17320.17520.3 15.96 13.12 1.119 10 1 1 0 913.8274 2659.5031 S1970s TMT10 1955 (K) TTTAAAVASTGPSSRsPSTLLPK (K) T(0.0)T(0.0)T(0.0)AAAVAS(0.0)T(0.0)GPS(0.0)S(0.0)RS(0.99)PS(0.0)T(0.0)LLPK K:TMT10,s:Phosphorylated S MAP4 246695.2 9 34 38.1 865.62 HUMAN 1 0.1317 -27.8383 STGREGQTPKAGLRV-p Q09666;T324-p STGREGQTPKAGLRV 0.587550147552526 0.0408957202568247 0.145333333333333 -0.655666666666667 4.2524067716222 18.6078733651645 0.145333333333333 -0.655666666666667 0.375629180550808 0.0137788402013922 0.965080255629316 -3.58328979522934 Q09666 AHNAK Q09666.T324.p_AHNAK Q09666_T324t _1_1_324_324 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10789.10789.3 13.07 6.68 5.809 3 1 1 0 634.6681 1822.0223 T324t TMT10 314 (K) FGVSTGREGQtPK (A) FGVS(0.0)T(0.0)GREGQT(0.99)PK K:TMT10,t:Phosphorylated T AHNAK 629603.7 2 16 1.1 4313.36 HUMAN 1 4.2524 -18.6079 STGRSSQSSSQQFSG-p A0A1W2PQ51;S676-p STGRSSQSSSQQFSG 0.307676690290785 0.494222531831253 0.224666666666667 0.091 9.56634203544135 4.09226860429466 0.224666666666667 0.091 0.110500895218865 0.389738347649524 1.90645744073126 0.934565249660863 A0A1W2PQ51 NotFound A0A1W2PQ51.S676.p_NotFound A0A1W2PQ51_S676s _1_1_676_676 A0A1W2PQ51 A0A1W2PQ51|Q92841|A0A1X7SBZ2|Q92841-2|Q92841-3|Q92841-1 Probable ATP-dependent RNA helicase DDX17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9431.9431.2 13.86 13.86 1.125 6 1 1 0 882.911 1684.8452 S676s TMT10 673 (R) SSQsSSQQFSGIGR (S) S(0.0)S(0.0)QS(0.99)S(0.0)S(0.0)QQFS(0.0)GIGR s:Phosphorylated S DDX17 81140.9 3 6 2075.2 99 HUMAN 1 9.5663 4.0923 STIDDTISKFRRKDR-p Q14677-3;S217-p STIDDTISKFRRKDR 0.754302977091833 0.00857793023874917 -0.0543333333333333 0.517333333333333 2.33964703754296 29.3187674607821 -0.0543333333333334 0.517333333333333 0.58349252430664 0.0011698313451405 -0.582771426662446 6.21794270454202 Q14677 CLINT1 Q14677.3.S217.p_CLINT1 Q14677-3_S217s _1_1_217_217 Q14677-3 Q14677-3|Q14677-2 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18189.18189.3 12.7 12.23 1.226 4 1 1 0 563.3028 1607.9256 S217s TMT10 208 (K) IGSTIDDTIsK (F) IGS(0.0)T(0.0)IDDT(0.0)IS(0.99)K K:TMT10,s:Phosphorylated S CLINT1 70350.7 1 15 632.1 256.73 HUMAN 1 -2.3396 29.3188 STIIRSKTFSPGPQS-p Q8IX03-2;T929-p STIIRSKTFSPGPQS 0.183137437143677 0.0117343586168434 -0.259 0.567666666666667 14.4953368008876 26.9849248402407 -0.259 0.567666666666667 0.0355194571623951 0.00200220027171576 -2.78432610292471 5.55704536873025 Q8IX03 WWC1 Q8IX03.2.T929.p_WWC1 Q8IX03-2_T929t _1_1_929_929 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13451.13451.3 13.6 13.6 1.235 4 1 1 0 612.6169 1755.8686 T929t TMT10 929 (K) tFSPGPQSQYVCR (L) T(0.99)FS(0.0)PGPQS(0.0)QY(0.0)VCR C:Carbamidomethylation,t:Phosphorylated T WWC1 126701.1 2 17 312.1 370.85 HUMAN 1 -14.4953 26.9849 STIRRTSSLDTITGP-p Q86VQ1;S172-p STIRRTSSLDTITGP 0.916851780208341 0.796041429659667 0.0163333333333333 0.0286666666666667 0.735682468978295 1.38320047542982 0.0163333333333333 0.0286666666666667 0.844173574428676 0.727243674459465 0.206196446364022 0.367379849930174 Q86VQ1 GLCCI1 Q86VQ1.S172.p_GLCCI1 Q86VQ1_S172s _1_1_172_172 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28729.28729.2 15.3 11.04 1.268 7 1 1 0 1151.5705 2222.1655 S172s TMT10 170 (R) TSsLDTITGPYLTGQWPR (D) T(0.0)S(0.0)S(0.99)LDT(0.0)IT(0.0)GPY(0.0)LT(0.0)GQWPR s:Phosphorylated S GLCCI1 58707.2 9 6 307.1 373.49 HUMAN 1 0.7357 1.3832 STISGRLSPIMTEQD-p Q12778;S329-p STISGRLSPIMTEQD 0.0359148937682839 0.00359402805935534 0.589666666666667 0.974333333333333 33.6311733124208 36.4050326356877 0.589666666666667 0.974333333333334 0.000433393774667208 0.000228821451639106 7.61764909462627 8.62612808559208 Q12778 FOXO1 Q12778.S329.p_FOXO1 Q12778_S329s _1_1_329_329 Q12778 Q12778 Forkhead box protein O1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22467.22467.4 23.82 23.82 1.496 11 1 1 0 1122.5475 4407.1849 S329s TMT10 317 (R) TSSNASTISGRLsPIMTEQDDLGEGDVHSMVYPPSAAK (M) T(0.0)S(0.0)S(0.0)NAS(0.0)T(0.0)IS(0.0)GRLS(0.99)PIMT(0.0)EQDDLGEGDVHS(0.0)MVY(0.0)PPS(0.0)AAK K:TMT10,s:Phosphorylated S FOXO1 70059.8 4 9 2524.2 80 HUMAN 1 33.6312 36.405 STKAEFTSPPSLFKT-p Q6UN15;S259-p STKAEFTSPPSLFKT 0.731262540645938 0.0045642445280084 -0.0476666666666667 -0.818333333333333 2.57983551107685 34.2775368294943 -0.0476666666666667 -0.818333333333333 0.552098349595535 0.000373461912627459 -0.633699191946862 -7.83200074886183 Q6UN15 FIP1L1 Q6UN15.S259.p_FIP1L1 Q6UN15_S259s _1_1_259_259 Q6UN15 A0A0B4J203|Q6UN15|Q6UN15-5|Q6UN15-3|Q6UN15-4 Pre-mRNA 3'-end-processing factor FIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25784.25974.3 14.67 12.29 1.112 6 1 1 0 940.1827 2738.5583 S259s TMT10 247 (K) ETALPSTKAEFTsPPSLFK (T) ET(0.0)ALPS(0.0)T(0.0)KAEFT(0.0)S(0.99)PPS(0.0)LFK K:TMT10,s:Phosphorylated S FIP1L1 66639.3 7 6 404.1 326.66 HUMAN 1 -2.5798 -34.2775 STKAMAGSILNSYIP-p Q9NV58;S599-p STKAMAGSILNSYIP 0.104253358432022 0.182427254608387 -0.713666666666667 -0.156 20.7000085798685 9.7196965079515 -0.713666666666667 -0.156 0.00851136356706169 0.10666706593066 -4.03081638855521 -1.93229382446086 Q9NV58 RNF19A Q9NV58.S599.p_RNF19A Q9NV58_S599s _1_1_599_599 Q9NV58 Q9NV58|Q9NV58-3 E3 ubiquitin-protein ligase RNF19A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.31234.31234.3 18.07 18.07 1.693 3 1 1 0 711.0473 2051.1611 S599s TMT10 595 (K) AMAGsILNSYIPLDK (E) AMAGS(0.99)ILNS(0.0)Y(0.0)IPLDK K:TMT10,s:Phosphorylated S RNF19A 92691.7 2 5 2862.1 67.91 HUMAN 1 -20.7 -9.7197 STKEGPETPPRPRDQ-p Q99501;T334-p STKEGPETPPRPRDQ 0.18516399568195 0.525085894141539 0.33 -0.0653333333333333 14.4092941914963 3.75916715414423 0.33 -0.0653333333333333 0.0362301874358337 0.420807318801599 2.7683804078055 -0.870663802531161 Q99501 GAS2L1 Q99501.T334.p_GAS2L1 Q99501_T334t _1_1_334_334 Q99501 Q99501|A0A5E8 GAS2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5280.5280.3 13.35 13.35 99 1 1 1 0 482.2434 1364.7484 T334t TMT10 330 (K) EGPEtPPRPR (D) EGPET(1.0)PPRPR t:Phosphorylated T GAS2L1 73400.1 3 4 1084.1 179.86 HUMAN 1 14.4093 -3.7592 STKEVDKTPPPQPPL-p Q92625;T318-p STKEVDKTPPPQPPL 0.720519320720127 0.0899149518025314 -0.0523333333333333 -0.238333333333333 2.68839393641938 13.8448579345235 -0.0523333333333333 -0.238333333333333 0.538468876771325 0.0412585733311711 -0.65637840791375 -2.66290210686049 Q92625 ANKS1A Q92625.T318.p_ANKS1A Q92625_T318t _1_1_318_318 Q92625 Q92625 Ankyrin repeat and SAM domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24492.24492.3 18.89 14.49 8.86 5 1 1 0 1054.5653 3081.7109 T318t TMT10 314 (K) EVDKtPPPQPPLISSMDSISQK (S) EVDKT(0.99)PPPQPPLIS(0.0)S(0.0)MDS(0.0)IS(0.0)QK K:TMT10,t:Phosphorylated T ANKS1A 124075.6 7 1 709.1 238.85 HUMAN 1 -2.6884 -13.8449 STKEVRSSIRQVSDV-p Q13263;S280-p STKEVRSSIRQVSDV 0.958185700416475 0.102331537175361 0.0126666666666667 0.185 0.360295026027985 13.0743746706536 0.0126666666666666 0.185 0.920387045663406 0.0492677277564407 0.104697661269424 2.52308371868229 Q13263 TRIM28 Q13263.S280.p_TRIM28 Q13263_S280s _1_1_280_280 Q13263 Q13263|Q13263-2 Transcription intermediary factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4580.4580.3 7.18 7.18 1.585 2 1 1 0 385.8744 1075.6421 S280s TMT10 276 (K) EVRSsIR (Q) EVRS(0.0)S(0.99)IR s:Phosphorylated S TRIM28 90316.8 1 8 118.1 555.36 HUMAN 1 0.3603 13.0744 STKGQEQSAQKTKDM-p Q9Y6Y8;S728-p STKGQEQSAQKTKDM 0.239758692517376 0.0177741500025631 0.881666666666667 -0.688666666666667 11.8559195668788 24.112841733797 0.881666666666667 -0.688666666666667 0.0652240922123457 0.00387896469322239 2.30680453784444 -4.81680358837612 Q9Y6Y8 SEC23IP Q9Y6Y8.S728.p_SEC23IP Q9Y6Y8_S728s _1_1_728_728 Q9Y6Y8 Q9Y6Y8 SEC23-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7246.7246.4 12.26 13.93 6.318 4 1 1 0 593.8254 2292.3126 S728s TMT10 716 (K) AVAATSTKGQEQsAQK (T) AVAAT(0.0)S(0.0)T(0.0)KGQEQS(0.99)AQK K:TMT10,s:Phosphorylated S SEC23IP 111759.1 1 3 1985.1 104.07 HUMAN 1 11.8559 -24.1128 STKKRSESPPAELPS-p Q14669-3;S354-p STKKRSESPPAELPS 0.168689953351787 0.918179306865522 0.307333333333333 -0.0166666666666666 15.4229605947983 0.521755280125292 0.307333333333333 -0.0166666666666666 0.0286882423164429 0.886797524252276 2.95816063297849 -0.149187811677242 Q14669 TRIP12 Q14669.3.S354.p_TRIP12 Q14669-3_S354s _1_1_354_354 Q14669-3 Q14669-3|Q14669-2|G5E9G6 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9633.9837.4 13.65 13.65 1.28 3 1 1 0 476.7543 1824.0289 S354s TMT10 351 (K) RSEsPPAELPSLRR (S) RS(0.0)ES(0.99)PPAELPS(0.0)LRR s:Phosphorylated S TRIP12 227456.1 11 8 234.1 420.47 HUMAN 1 15.423 -0.5218 STKNTPVSPGSTFPD-p Q8IWI9-4;S645-p STKNTPVSPGSTFPD 0.398390547111241 0.971379916575195 -0.125666666666667 0.00533333333333336 7.37629847705687 0.179207474967647 -0.125666666666667 0.00533333333333334 0.182965898321686 0.959575724322502 -1.52673468657633 0.0530711612001578 Q8IWI9 MGA Q8IWI9.4.S645.p_MGA Q8IWI9-4_S645s _1_1_645_645 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.36588.36588.4 19.73 19.73 1.126 6 1 1 0 1023.2794 4010.1253 S645s TMT10 641 (K) NTPVsPGSTFPDVKPDLEDVDGVLFVSFESK (E) NT(0.0)PVS(0.99)PGS(0.0)T(0.0)FPDVKPDLEDVDGVLFVS(0.0)FES(0.0)K K:TMT10,s:Phosphorylated S MGA 338321.5 2 6 141.1 523.06 HUMAN 1 -7.3763 0.1792 STKSPQPSPSSRKSP-p O94887;S480-p STKSPQPSPSSRKSP 0.154420361443535 0.955505632112976 -0.246333333333333 0.00866666666666668 16.3050698237348 0.28247368127836 -0.246333333333333 0.00866666666666668 0.0234149382947837 0.937028136636182 -3.12698820270117 0.0827385421036983 O94887 FARP2 O94887.S480.p_FARP2 O94887_S480s _1_1_480_480 O94887 O94887|O94887-2|O94887-3 FERM, ARHGEF and pleckstrin domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4080.4080.3 8.06 8.06 2.374 4 1 1 0 536.9548 1528.8848 S480s TMT10 476 (K) SPQPsPSSRK (S) S(0.0)PQPS(0.99)PS(0.0)S(0.0)RK K:TMT10,s:Phosphorylated S FARP2 120799.1 2 7 733.1 235.57 HUMAN 1 -16.3051 0.2825 STLFRGWSQEGPVKS-p Q9C0C2;S221-p STLFRGWSQEGPVKS 0.449867846169833 0.0871740300227664 -0.102333333333333 -0.185333333333333 6.40989297844746 14.0280256160882 -0.102333333333333 -0.185333333333333 0.22856551272194 0.0395546401988523 -1.35726893555248 -2.69644402898822 Q9C0C2 TNKS1BP1 Q9C0C2.S221.p_TNKS1BP1 Q9C0C2_S221s _1_1_221_221 Q9C0C2 Q9C0C2|E9PKK0 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20089.20089.4 15.2 9.85 2.526 8 1 1 0 874.4296 3414.733 S221s TMT10 201 (R) TYGTTTAPRDEDGSTLFRGWsQEGPVK (S) T(0.0)Y(0.0)GT(0.0)T(0.0)T(0.0)APRDEDGS(0.0)T(0.0)LFRGWS(0.99)QEGPVK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 17 5 4.1 2105.7 HUMAN 1 -6.4099 -14.028 STLGRTRSLPITIEM-p Q8IZ21;S464-p STLGRTRSLPITIEM 0.318646052785929 0.615511679686043 -0.137333333333333 0.0486666666666667 9.29410890759867 2.86384591048667 -0.137333333333333 0.0486666666666667 0.117649235451462 0.517148666244185 -1.85928729614727 0.692524845684224 Q8IZ21 PHACTR4 Q8IZ21.S464.p_PHACTR4 Q8IZ21_S464s _1_1_464_464 Q8IZ21 Q8IZ21-2|Q8IZ21-3 Phosphatase and actin regulator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.35430.35430.5 23.84 18.6 2.092 9 1 1 0 1021.7093 5024.5173 S464s TMT10 464 (R) sLPITIEMLKVPDDEEEEEQTCPSTFSEEMTPTSVIPK (L) S(0.99)LPIT(0.0)IEMLKVPDDEEEEEQT(0.0)CPS(0.0)T(0.0)FS(0.0)EEMT(0.0)PT(0.0)S(0.0)VIPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PHACTR4 78438 16 12 350.1 351.04 HUMAN 1 -9.2941 2.8638 STLMKKKSDPEGPAL-p Q8N1S5;S125-p STLMKKKSDPEGPAL 0.53706412572523 0.00248584650157384 0.0903333333333333 0.717 4.99195620819819 39.9050200876945 0.0903333333333333 0.717 0.316814010490182 0.000102211083295593 1.10258382530848 10.0887218368453 Q8N1S5 SLC39A11 Q8N1S5.S125.p_SLC39A11 Q8N1S5_S125s _1_1_125_125 Q8N1S5 Q8N1S5|Q8N1S5-2|J3QS49|J3QRN3 Zinc transporter ZIP11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24974.24974.4 20.16 14.69 14.336 3 1 1 0 745.916 2900.67 S125s TMT10 123 (K) KKsDPEGPALLFPESELSIR (I) KKS(0.99)DPEGPALLFPES(0.0)ELS(0.0)IR K:TMT10,s:Phosphorylated S SLC39A11 35395.4 1 1 4396.1 32.07 HUMAN 1 4.992 39.905 STLPRSFSLDPLMER-p Q63HR2-4;S130-p STLPRSFSLDPLMER 0.158297715435374 0.592984753364656 -0.240333333333333 -0.0676666666666666 16.0538259185443 3.07053215714044 -0.240333333333333 -0.0676666666666666 0.0248094655170371 0.493113377241356 -3.07853225247251 -0.734597619743281 Q63HR2 TNS2 Q63HR2.4.S130.p_TNS2 Q63HR2-4_S130s _1_1_130_130 Q63HR2-4 Q63HR2-4|Q63HR2-6|F8VV64|Q63HR2-2 Isoform 4 of Tensin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21399.21399.3 14.62 6.98 2.081 2 1 1 0 553.9428 1579.8464 S130s TMT10 128 (R) SFsLDPLMERR (W) S(0.0)FS(0.99)LDPLMERR s:Phosphorylated S TNS2 155500.6 3 2 453.1 308.04 HUMAN 1 -16.0538 -3.0705 STLRRNDSIYEASSL-p Q96EY5;S202-p STLRRNDSIYEASSL 0.279555400121424 0.363033799858537 0.155 0.117333333333333 10.4642551449151 5.83428051148698 0.155 0.117333333333333 0.0898616700405564 0.260958801335152 2.06249568687248 1.25469440757171 Q96EY5 MVB12A Q96EY5.S202.p_MVB12A Q96EY5_S202s _1_1_202_202 Q96EY5 Q96EY5|E9PQA6 Multivesicular body subunit 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.31364.31364.3 30.36 30.36 4.831 7 1 1 0 1050.4982 3069.5189 S202s TMT10 200 (R) NDsIYEASSLYGISAMDGVPFTLHPR (F) NDS(0.99)IY(0.0)EAS(0.0)S(0.0)LY(0.0)GIS(0.0)AMDGVPFT(0.0)LHPR s:Phosphorylated S MVB12A 29124.8 6 5 1382.1 148.21 HUMAN 1 10.4643 5.8343 STLSKLPTPTSSVPA-p Q9BTA9;T293-p STLSKLPTPTSSVPA 0.199418709267342 0.224471528800999 -0.300666666666667 0.283333333333333 13.6177561590751 8.54411957016246 -0.300666666666667 0.283333333333333 0.0434734777734522 0.139826035096567 -2.62300186570557 1.72885811085541 Q9BTA9 WAC Q9BTA9.T293.p_WAC Q9BTA9_T293t _1_1_293_293 Q9BTA9 Q9BTA9|Q9BTA9-2|Q9BTA9-3 WW domain-containing adapter protein with coiled-coil HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20857.20857.3 7.89 7.49 1.467 8 1 1 0 1057.9068 3091.7242 T293t TMT10 279 (K) SFDANGASTLSKLPtPTSSVPAQK (T) S(0.0)FDANGAS(0.0)T(0.0)LS(0.0)KLPT(0.99)PT(0.0)S(0.0)S(0.0)VPAQK K:TMT10,t:Phosphorylated T WAC 71065.3 2 3 918.1 200.44 HUMAN 1 -13.6178 8.5441 STLSRSLSLQASDFD-p O95359;S2088-p STLSRSLSLQASDFD 0.898522472312718 0.460567155094155 -0.024 0.0763333333333334 0.909431691404976 4.49005181717035 -0.024 0.0763333333333334 0.811067185450338 0.355627075434557 -0.25100344042951 1.00953205622854 O95359 TACC2 O95359.S2088.p_TACC2 O95359_S2088s _1_1_2088_2088 O95359 O95359|E9PBC6|O95359-3|E7EMZ9|O95359-5|Q4VXL8|O95359-1|D6RAA5|O95359-6 Transforming acidic coiled-coil-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27362.27362.3 30.69 30.69 1.153 15 1 1 0 1458.0291 4292.1094 S2088s TMT10 2086 (R) SLsLQASDFDGASSSGNPEAVALAPDAYSTGSSSASSTLK (R) S(0.0)LS(0.99)LQAS(0.0)DFDGAS(0.0)S(0.0)S(0.0)GNPEAVALAPDAY(0.0)S(0.0)T(0.0)GS(0.0)S(0.0)S(0.0)AS(0.0)S(0.0)T(0.0)LK K:TMT10,s:Phosphorylated S TACC2 311818.1 4 14 101.1 597.93 HUMAN 1 -0.9094 4.4901 STLSVPASPRVARKM-p Q86SQ0;S334-p STLSVPASPRVARKM 0.58766889266991 0.524070133017776 0.084 -0.085 4.25084755608331 3.7709607732503 0.084 -0.085 0.375764064144681 0.419666132570147 0.96478580730231 -0.872945562870036 Q86SQ0 PHLDB2 Q86SQ0.S334.p_PHLDB2 Q86SQ0_S334s _1_1_334_334 Q86SQ0 Q86SQ0|Q86SQ0-3|Q86SQ0-2|G5E9V3|E9PDY7 Pleckstrin homology-like domain family B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17123.17123.3 17.18 17.18 1.217 9 1 1 0 806.0591 2336.1931 S334s TMT10 316 (K) TSASEGNPYVSSTLSVPAsPR (V) T(0.0)S(0.0)AS(0.0)EGNPY(0.0)VS(0.0)S(0.0)T(0.0)LS(0.0)VPAS(0.99)PR s:Phosphorylated S PHLDB2 142897.4 2 5 1231.1 163.76 HUMAN 1 4.2508 -3.771 STLSVSASPEKSYSR-p X6RAB3;S703-p STLSVSASPEKSYSR 0.814089108611631 0.0110620488005202 0.041 -0.390666666666667 1.71745284537494 27.3953407711072 0.041 -0.390666666666667 0.673371475573486 0.00182165413057799 0.445279166426235 -5.66918769627783 X6RAB3 NotFound X6RAB3.S703.p_NotFound X6RAB3_S703s _1_1_703_703 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7199.7199.3 17.45 17.45 2.542 5 1 1 0 697.7058 2011.1337 S703s TMT10 692 (R) RPHGSTLSVSAsPEK (S) RPHGS(0.0)T(0.0)LS(0.0)VS(0.0)AS(0.99)PEK K:TMT10,s:Phosphorylated S USP6NL 96835.5 8 12 364.1 342.41 HUMAN 1 1.7175 -27.3953 STLTDDPSPRLSAQA-p Q14C86-6;S1046-p STLTDDPSPRLSAQA 0.108078410418423 0.340736825559057 -0.375 -0.139 20.3255173874983 6.19403218396651 -0.375 -0.139 0.00927786953616871 0.240213151815324 -3.94916078356062 -1.31873282480121 Q14C86 GAPVD1 Q14C86.6.S1046.p_GAPVD1 Q14C86-6_S1046s _1_1_1046_1046 Q14C86-6 Q14C86-6|Q14C86-2|Q14C86-5|Q14C86-4 Isoform 6 of GTPase-activating protein and VPS9 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15712.15712.3 12.13 9.13 1.804 4 1 1 0 515.5787 1464.7532 S1046s TMT10 1038 (R) FSTLTDDPsPR (L) FS(0.0)T(0.0)LT(0.0)DDPS(0.99)PR s:Phosphorylated S GAPVD1 167648.8 3 17 268.1 394.98 HUMAN 1 -20.3255 -6.194 STMGSSFSYPDVKLK-p Q8NAX2;S160-p STMGSSFSYPDVKLK 0.993608271974075 0.410491884001306 0.00133333333333333 0.078 0.0594594311969718 5.14529569692349 0.00133333333333332 0.0780000000000001 0.986402256038262 0.305823201439568 0.0178446788387595 1.13038470942291 Q8NAX2 KDF1 Q8NAX2.S160.p_KDF1 Q8NAX2_S160s _1_1_160_160 Q8NAX2 Q8NAX2 Keratinocyte differentiation factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19341.19341.3 16.59 15.16 1.966 6 1 1 0 648.6456 1863.9563 S160s TMT10 153 (K) STMGSSFsYPDVK (L) S(0.0)T(0.0)MGS(0.0)S(0.0)FS(0.99)Y(0.0)PDVK K:TMT10,s:Phosphorylated S KDF1 44496.8 3 3 2331.1 87.55 HUMAN 1 0.0595 5.1453 STMTRRGSSPGSLEI-p Q6GYQ0-2;S860-p STMTRRGSSPGSLEI 0.330275298399303 0.679657134750731 0.164333333333333 0.043 8.99164616723564 2.29214798958375 0.164333333333333 0.043 0.1261349337052 0.589909243096311 1.80691671252579 0.572500310196752 Q6GYQ0 RALGAPA1 Q6GYQ0.2.S860.p_RALGAPA1 Q6GYQ0-2_S860sS861sS864s_3_3_860_864 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30732.31174.4 11.62 11.62 99 3 3 3 0 766.6434 2823.6547 S860s S861s S864s TMT10 858 (R) RGssPGsLEIPKDLPDILNK (Q) RGS(1.0)S(1.0)PGS(1.0)LEIPKDLPDILNK K:TMT10,s:Phosphorylated S RALGAPA1 236609.9 6 22 317.1 366.49 HUMAN 1 8.9916 2.2921 STNCRKDSLSQLEEY-p O60303;S691-p STNCRKDSLSQLEEY 0.24333175644278 0.595220213714289 -0.266 0.133666666666667 11.7380511870987 3.050280302967 -0.266 0.133666666666667 0.0670185274695942 0.495418214419484 -2.28595653000864 0.730502901823571 O60303 KIAA0556 O60303.S691.p_KIAA0556 O60303_S691s _1_1_691_691 O60303 O60303 Protein KIAA0556 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24467.24467.3 13.23 13.23 1.101 3 1 1 0 673.6903 1939.0901 S691s TMT10 689 (R) KDsLSQLEEYLR (L) KDS(0.99)LS(0.0)QLEEY(0.0)LR K:TMT10,s:Phosphorylated S KIAA0556 182055.4 2 6 1063.1 181.85 HUMAN 1 -11.7381 3.0503 STNHEQQSPQSGKVI-p P40818;S434-p STNHEQQSPQSGKVI 0.134738301810513 0.00377230104265856 0.460666666666667 -0.846333333333333 17.8618557619611 35.9300881250898 0.460666666666667 -0.846333333333333 0.0163611725098382 0.000255264950491607 3.43436136753333 -8.44299510378359 P40818 USP8 P40818.S434.p_USP8 P40818_S434s _1_1_434_434 P40818 P40818|P40818-2|A0A075B720 Ubiquitin carboxyl-terminal hydrolase 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5440.5440.4 20.3 20.3 5.527 5 1 1 0 663.8459 2572.3934 S434s TMT10 423 (R) IKSESTNHEQQsPQSGK (V) IKS(0.0)ES(0.0)T(0.0)NHEQQS(0.99)PQS(0.0)GK K:TMT10,s:Phosphorylated S USP8 128490.8 1 5 788.1 224.97 HUMAN 1 17.8619 -35.9301 STNKQQQSPPKGKSL-p J3QS41;S1127-p STNKQQQSPPKGKSL 0.0715981735064038 0.890735500876595 0.399 0.017 24.7608932253149 0.705639413202363 0.399 0.017 0.00334126312288008 0.850033533255699 4.98347217699041 0.198299973440146 J3QS41 HELZ J3QS41.S1127.p_HELZ J3QS41_S1127s _1_1_1127_1127 J3QS41 J3QS41|P42694 Probable helicase with zinc finger domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5465.5465.2 13.12 13.12 99 1 1 1 0 883.0012 1685.0313 S1127s TMT10 1124 (K) QQQsPPKGK (S) QQQS(1.0)PPKGK K:TMT10,s:Phosphorylated S HELZ 220821.8 11 6 466.1 303.39 HUMAN 1 24.7609 0.7056 STNPLTPTPPPPVAK-p O43150;T845-p STNPLTPTPPPPVAK 0.121347188474092 0.00604775327324358 0.312666666666667 0.567333333333333 19.0499557458041 32.0207108226712 0.312666666666667 0.567333333333334 0.0124452729332188 0.000627955571049263 3.6779618306123 7.05908716382232 O43150 ASAP2 O43150.T845.p_ASAP2 O43150_T845t _1_1_845_845 O43150 O43150 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20202.20202.3 19.27 19.27 2.816 5 1 1 0 752.4222 2175.2789 T845t TMT10 836 (R) VTSTNPLTPtPPPPVAK (T) VT(0.0)S(0.0)T(0.0)NPLT(0.0)PT(0.99)PPPPVAK K:TMT10,t:Phosphorylated T ASAP2 112903.8 2 7 1037.1 185.54 HUMAN 1 19.05 32.0207 STNRRRLSELLRYHT-p P08238;S452-p STNRRRLSELLRYHT 0.322370497428223 0.0328905018679653 -0.274333333333333 -0.591666666666667 9.20514552437493 20.0040183344081 -0.274333333333333 -0.591666666666667 0.120084083429488 0.00999075172226387 -1.84388050909735 -3.87618476327259 P08238 HSP90AB1 P08238.S452.p_HSP90AB1 P08238_S452s _1_1_452_452 P08238 P08238 Heat shock protein HSP 90-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18499.18499.3 7.44 2.33 99 1 1 1 0 399.2296 1115.7098 S452s TMT10 450 (R) RLsELLR (Y) RLS(1.0)ELLR s:Phosphorylated S HSP90AB1 83605 1 34 43.2 810.87 HUMAN 1 -9.2051 -20.004 STNRSRNSPLLERAS-p E9PC69;S485-p STNRSRNSPLLERAS 0.696754788756467 0.360527393271259 0.0666666666666667 0.0913333333333334 2.94969808441305 5.87915630300439 0.0666666666666667 0.0913333333333334 0.507025954800811 0.25827618909532 0.710176763340884 1.26271149074403 E9PC69 NotFound E9PC69.S485.p_NotFound E9PC69_S485s _1_1_485_485 E9PC69 Q7KZI7-8|E9PC69|Q7KZI7-11|Q7KZI7-6|Q7KZI7-3|Q7KZI7-14|Q7KZI7-12|Q7KZI7-9|Q7KZI7-4|Q7KZI7-16|Q7KZI7-5|Q7KZI7-15|Q7KZI7-2|E7ETY4|Q7KZI7-7|Q7KZI7-13|Q7KZI7-10 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9888.9888.2 11.96 6.26 99 1 1 1 0 569.2967 1057.6203 S485s TMT10 484 (R) NsPLLER (A) NS(1.0)PLLER s:Phosphorylated S MARK2 87089.2 6 13 200.1 451.67 HUMAN 1 2.9497 5.8792 STNVIVDSGGFDELG-p Q13492;S504-p STNVIVDSGGFDELG 0.111154875717767 0.112146275073429 0.300333333333333 0.189 19.9289986909109 12.5402820774474 0.300333333333333 0.189 0.0101648302611943 0.0557149560484617 3.86372926628594 2.42727290421974 Q13492 PICALM Q13492.S504.p_PICALM Q13492_S504s _1_1_504_504 Q13492 Q13492|Q13492-5 Phosphatidylinositol-binding clathrin assembly protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32155.32155.4 14.09 9.32 2.205 5 1 1 0 1034.8101 4056.2584 S504s TMT10 497 (K) STNVIVDsGGFDELGGLLKPTVASQNQNLPVAK (L) S(0.0)T(0.0)NVIVDS(0.99)GGFDELGGLLKPT(0.0)VAS(0.0)QNQNLPVAK K:TMT10,s:Phosphorylated S PICALM 70924.4 2 5 2544.1 79.1 HUMAN 1 19.929 12.5403 STPAEDDSPGDSQVK-p Q9UHB6-4;S343-p STPAEDDSPGDSQVK 0.390987808375823 0.00855566836817945 -0.225666666666667 0.511666666666667 7.53515781764021 29.3335889187304 -0.225666666666667 0.511666666666667 0.176394166369215 0.00116584578830554 -1.55440212681849 6.22232570453926 Q9UHB6 LIMA1 Q9UHB6.4.S343.p_LIMA1 Q9UHB6-4_S343s _1_1_343_343 Q9UHB6-4 Q9UHB6-4|Q9UHB6-5 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8737.8737.2 16.07 16.07 5.065 4 1 1 0 1035.9863 1990.997 S343s TMT10 336 (R) STPAEDDsPGDSQVK (S) S(0.0)T(0.0)PAEDDS(0.99)PGDS(0.0)QVK K:TMT10,s:Phosphorylated S LIMA1 85678.4 1 15 42.1 822.82 HUMAN 1 -7.5352 29.3336 STPAFPVSPETPYVK-p Q68CZ2;S850-p STPAFPVSPETPYVK 0.90552186362789 0.0116655556168356 -0.0213333333333333 -0.441333333333333 0.848200309878261 27.0370265577664 -0.0213333333333333 -0.441333333333333 0.822583452947149 0.00197832365635712 -0.235355295885675 -5.57118891702101 Q68CZ2 TNS3 Q68CZ2.S850.p_TNS3 Q68CZ2_S850s _1_1_850_850 Q68CZ2 Q68CZ2|Q68CZ2-2 Tensin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24193.24193.3 17.11 17.11 4.224 6 1 1 0 889.0952 2585.3032 S850s TMT10 839 (K) ESMCSTPAFPVsPETPYVK (T) ES(0.0)MCS(0.0)T(0.0)PAFPVS(0.99)PET(0.0)PY(0.0)VK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNS3 156460.9 4 12 183.1 477.16 HUMAN 1 -0.8482 -27.037 STPDSTYSESFKDAA-p Q6ISB3;S217-p STPDSTYSESFKDAA 0.168742253358342 0.873268242874909 0.351666666666667 0.028 15.416304459717 0.829066621405379 0.351666666666667 0.028 0.028732244538213 0.826215499380419 2.95690021731716 0.230412110932199 Q6ISB3 GRHL2 Q6ISB3.S217.p_GRHL2 Q6ISB3_S217s _1_1_217_217 Q6ISB3 Q6ISB3|Q6ISB3-2 Grainyhead-like protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16221.16221.4 16.84 16.84 1.986 8 1 1 0 683.5901 2651.3655 S217s TMT10 210 (R) STPDSTYsESFKDAATEK (F) S(0.0)T(0.0)PDS(0.0)T(0.0)Y(0.0)S(0.99)ES(0.0)FKDAAT(0.0)EK K:TMT10,s:Phosphorylated S GRHL2 71446.2 2 8 651.1 254.16 HUMAN 1 15.4163 0.8291 STPEQQNSPSGSEQF-p O15231-3;S520-p STPEQQNSPSGSEQF 0.892526264868545 0.57788547349229 -0.02 -0.061 0.966251619830894 3.21308474525871 -0.02 -0.061 0.800524887095309 0.477190210372218 -0.265391445452263 -0.763258088974375 O15231 ZNF185 O15231.3.S520.p_ZNF185 O15231-3_S520s _1_1_520_520 O15231-3 O15231-6|O15231-8|O15231-3|O15231-7|O15231-4|H7BZT5|O15231-5|O15231-2|O15231-9 Isoform 3 of Zinc finger protein 185 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14824.14824.3 24.25 21.18 1.915 6 1 1 0 1234.8977 3622.7207 S520s TMT10 497 (R) GGQGDPAVPTQQPADPSTPEQQNsPSGSEQFVR (R) GGQGDPAVPT(0.0)QQPADPS(0.0)T(0.0)PEQQNS(0.99)PS(0.0)GS(0.0)EQFVR s:Phosphorylated S ZNF185 74524.1 7 15 166.1 494.62 HUMAN 1 -0.9663 -3.2131 STPESGDSDKESVGS-p Q6GQQ9;S467-p STPESGDSDKESVGS 0.94478758147709 0.993603399022795 -0.0213333333333334 0.004 0.487868930681048 0.0390895302223191 -0.0213333333333334 0.00400000000000002 0.893743933479579 0.991039688059401 -0.139972949763233 0.0117573635305344 Q6GQQ9 OTUD7B Q6GQQ9.S467.p_OTUD7B Q6GQQ9_S467s _1_1_467_467 Q6GQQ9 Q6GQQ9|Q6GQQ9-2 OTU domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.4290.4290.3 18 17.74 1.343 10 1 1 0 889.3819 2586.1601 S467s Hydrogen 460 (R) STPESGDsDKESVGSSSTSNEGGR (R) S(0.0)T(0.0)PES(0.0)GDS(0.99)DKES(0.0)VGS(0.0)S(0.0)S(0.0)T(0.0)S(0.0)NEGGR K:TMT10-Lys-Only,s:Phosphorylated S OTUD7B 93208.9 2 5 1645.1 123.96 HUMAN 1 -0.4879 0.0391 STPIPALSPPTKVPE-p Q7Z3K3;S445-p STPIPALSPPTKVPE 0.471141674992432 0.162046955699095 -0.143 -0.148333333333333 6.03251469040499 10.3928374958923 -0.143 -0.148333333333333 0.249315070269827 0.0913516193724228 -1.29035375595958 -2.04918449057104 Q7Z3K3 POGZ Q7Z3K3.S445.p_POGZ Q7Z3K3_S445s _1_1_445_445 Q7Z3K3 Q7Z3K3|Q7Z3K3-6|Q7Z3K3-3|Q7Z3K3-2|Q7Z3K3-7|Q7Z3K3-5 Pogo transposable element with ZNF domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24455.24455.4 25.31 25.31 3.348 9 1 1 0 1092.0883 4285.3534 S445s TMT10 429 (K) TAPVASTPSSTPIPALsPPTKVPEPNENVGDAVQTK (L) T(0.0)APVAS(0.0)T(0.0)PS(0.0)S(0.0)T(0.0)PIPALS(0.99)PPT(0.0)KVPEPNENVGDAVQT(0.0)K K:TMT10,s:Phosphorylated S POGZ 157451.9 5 7 811.1 221.02 HUMAN 1 -6.0325 -10.3928 STPKNDISPPGRFFS-p Q2NKX8;S1069-p STPKNDISPPGRFFS 0.959344047178047 0.0421423977999033 0.00933333333333332 -0.371 0.349216164818442 18.427325533808 0.00933333333333333 -0.371 0.922737952228045 0.0143637370669278 0.101593211678562 -3.54627940852538 Q2NKX8 ERCC6L Q2NKX8.S1069.p_ERCC6L Q2NKX8_S1069s _1_1_1069_1069 Q2NKX8 Q2NKX8|B5MDQ0 DNA excision repair protein ERCC-6-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22422.22633.3 17.59 10.58 1.996 5 1 1 0 905.8026 2635.4244 S1069s TMT10 1066 (K) NDIsPPGRFFSSQIPSSVNK (S) NDIS(0.99)PPGRFFS(0.0)S(0.0)QIPS(0.0)S(0.0)VNK K:TMT10,s:Phosphorylated S ERCC6L 142070.4 12 11 422.1 320.12 HUMAN 1 0.3492 -18.4273 STPLASPSPSPGRSP-p Q8WYP5-2;S1251-p STPLASPSPSPGRSP 0.570944608682304 0.693465860499104 0.0933333333333333 0.039 4.48046777843989 2.1823883774571 0.0933333333333334 0.039 0.356412742154291 0.605008062553357 1.00792749604991 0.548758928363968 Q8WYP5 AHCTF1 Q8WYP5.2.S1251.p_AHCTF1 Q8WYP5-2_S1251s _1_1_1251_1251 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9518.9518.2 12.08 12.08 1.394 5 1 1 0 781.8946 1482.8114 S1251s TMT10 1244 (R) STPLASPsPSPGR (S) S(0.0)T(0.0)PLAS(0.0)PS(0.99)PS(0.0)PGR s:Phosphorylated S AHCTF1 258049.6 6 12 40.1 829.79 HUMAN 1 4.4805 2.1824 STPLHSPSPIRVHTV-p O95817;S291-p STPLHSPSPIRVHTV 0.611537267066762 0.179761085936668 -0.084 0.157333333333333 3.95851670308689 9.80222299932028 -0.084 0.157333333333333 0.40192806261728 0.10465926972633 -0.909191705993304 1.946599726943 O95817 BAG3 O95817.S291.p_BAG3 O95817_S289sS291s_2_2_289_291 O95817 O95817 BAG family molecular chaperone regulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10028.10028.5 11.91 11.91 2.477 7 2 2 0 690.7446 3289.7538 S289s S291s TMT10 283 (R) SSTPLHsPsPIRVHTVVDRPQQPMTHR (E) S(0.0)S(0.0)T(0.0)PLHS(0.99)PS(0.99)PIRVHT(0.0)VVDRPQQPMT(0.0)HR s:Phosphorylated S BAG3 61764.7 6 16 416.1 321.05 HUMAN 1 -3.9585 9.8022 STPLSVHTPTLRKKG-p Q5VT25-2;T1014-p STPLSVHTPTLRKKG 0.215792279025167 0.817598851402086 0.390666666666667 -0.024 12.8345411927773 1.22324782360005 0.390666666666667 -0.024 0.0520650009584942 0.754527751328445 2.48129444375223 -0.328943467093266 Q5VT25 CDC42BPA Q5VT25.2.T1014.p_CDC42BPA Q5VT25-2_T1014t _1_1_1014_1014 Q5VT25-2 Q5VT25-2 Isoform 2 of Serine/threonine-protein kinase MRCK alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14835.14835.3 14.27 14.27 1.797 6 1 1 0 645.0033 1853.033 T1014t TMT10 1004 (K) TVDSTPLSVHtPTLR (K) T(0.0)VDS(0.0)T(0.0)PLS(0.0)VHT(0.99)PT(0.0)LR t:Phosphorylated T CDC42BPA 201918 1 6 917.1 200.65 HUMAN 1 12.8345 -1.2232 STPNHRRSQVIEKFE-p Q6WCQ1-2;S301-p STPNHRRSQVIEKFE 0.264770901243469 0.128911952653925 -0.190333333333333 -0.345333333333333 10.9453731316926 11.7287287118961 -0.190333333333333 -0.345333333333333 0.0804382635643544 0.0671625425641719 -2.146541884662 -2.28319996908055 Q6WCQ1 MPRIP Q6WCQ1.2.S301.p_MPRIP Q6WCQ1-2_S301s _1_1_301_301 Q6WCQ1-2 Q6WCQ1-2|Q6WCQ1-3 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24934.24934.3 17.74 17.74 99 1 1 1 0 729.731 2107.2051 S301s Hydrogen 301 (R) sQVIEKFEALDIEK (A) S(1.0)QVIEKFEALDIEK K:TMT10-Lys-Only,s:Phosphorylated S MPRIP 118899.7 4 6 204.1 449.03 HUMAN 1 -10.9454 -11.7287 STPQAANSPPNLGAK-p F5H070;S325-p STPQAANSPPNLGAK 0.539914690322165 0.0651045087437654 0.0933333333333333 -0.215 4.94205469819355 15.7865486099197 0.0933333333333334 -0.215 0.320475275961709 0.0263842734257267 1.09342853746409 -3.02520947687829 F5H070 NotFound F5H070.S325.p_NotFound F5H070_S325s _1_1_325_325 F5H070 F5H070|Q9Y4C1|F8WE62 Lysine-specific demethylase 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11785.11785.3 21.41 21.41 7.938 3 1 1 0 749.7228 2167.1872 S325s TMT10 316 (R) QQSTPQAANsPPNLGAK (I) QQS(0.0)T(0.0)PQAANS(0.99)PPNLGAK K:TMT10,s:Phosphorylated S KDM3A 150340.6 2 2 2638.1 75.64 HUMAN 1 4.9421 -15.7865 STPRRSDSAISVRSL-p Q6Q0C0;S88-p STPRRSDSAISVRSL 0.67396479002873 0.939959153297453 -0.0573333333333333 0.00800000000000003 3.21244303441394 0.383551834108777 -0.0573333333333334 0.00800000000000003 0.477260724912509 0.91547147466063 -0.763241236501455 0.111182460726061 Q6Q0C0 TRAF7 Q6Q0C0.S88.p_TRAF7 Q6Q0C0_S88s _1_1_88_88 Q6Q0C0 Q6Q0C0|Q6Q0C0-2 E3 ubiquitin-protein ligase TRAF7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5258.5258.2 10.02 7.1 1.228 3 1 1 0 650.3352 1219.6956 S88s TMT10 85 (R) RSDsAISVR (S) RS(0.0)DS(0.99)AIS(0.0)VR s:Phosphorylated S TRAF7 76433.6 2 1 4511.1 30.47 HUMAN 1 -3.2124 0.3836 STPSEAGSQDSGDGA-p Q13409-2;S95-p STPSEAGSQDSGDGA 0.147090784109906 0.301382142248943 0.432666666666667 0.161333333333333 16.9007568620953 6.8756950244885 0.432666666666667 0.161333333333333 0.0204138215396135 0.205319641625336 3.24311347924476 1.43884579225035 Q13409 DYNC1I2 Q13409.2.S95.p_DYNC1I2 Q13409-2_S95s _1_1_95_95 Q13409-2 Q13409-6|Q13409-5|Q13409-2|Q13409-7|Q13409-3 Isoform 2B of Cytoplasmic dynein 1 intermediate chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7889.7889.3 16.54 16.54 2.277 7 1 1 0 754.0025 2180.0265 S95s TMT10 86 (K) SVSTPSEAGsQDSGDGAVGSR (T) S(0.0)VS(0.0)T(0.0)PS(0.0)EAGS(0.99)QDS(0.0)GDGAVGS(0.0)R s:Phosphorylated S DYNC1I2 71042.8 2 7 1616.1 127.25 HUMAN 1 16.9008 6.8757 STPSEPLSPTSSLGE-p P13807;S727-p STPSEPLSPTSSLGE 0.484351536489608 0.0276346695899257 -0.111333333333333 -0.409 5.79953104570417 21.1297216531662 -0.111333333333333 -0.409 0.263055202545408 0.00770952879182497 -1.24876814786083 -4.12156758922339 P13807 GYS1 P13807.S727.p_GYS1 P13807_S727s _1_1_727_727 P13807 P13807|P13807-2 Glycogen [starch] synthase, muscle HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15250.15250.3 23.14 23.14 2 13 1 1 0 1139.2075 3335.64 S727s TMT10 708 (K) RNSVDTATSSSLSTPSEPLsPTSSLGEERN (-) RNS(0.0)VDT(0.0)AT(0.0)S(0.0)S(0.0)S(0.0)LS(0.0)T(0.0)PS(0.0)EPLS(0.99)PT(0.0)S(0.0)S(0.0)LGEERN s:Phosphorylated S GYS1 84582.8 4 6 1394.1 146.91 HUMAN 1 -5.7995 -21.1297 STPSSTRSPPPGRDE-p Q5VT52;S769-p STPSSTRSPPPGRDE 0.468631761933813 0.922999438186573 0.0983333333333333 0.00966666666666668 6.07730365248307 0.490365926074333 0.0983333333333333 0.00966666666666668 0.246757087030229 0.893230219134819 1.29832290121568 0.140641864821328 Q5VT52 RPRD2 Q5VT52.S769.p_RPRD2 Q5VT52_S769s _1_1_769_769 Q5VT52 Q5VT52|Q5VT52-3|Q5VT52-2|Q5VT52-5 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10367.10367.3 10.11 10.11 1.118 8 1 1 0 730.7115 2110.1454 S769s TMT10 756 (K) IISPGSSTPSSTRsPPPGR (D) IIS(0.0)PGS(0.0)S(0.0)T(0.0)PS(0.0)S(0.0)T(0.0)RS(0.99)PPPGR s:Phosphorylated S RPRD2 156473.2 8 19 172.1 488.65 HUMAN 1 6.0773 0.4904 STPSTGGSVDIISVK-p Q12830;S1769-p STPSTGGSVDIISVK 0.451712086772319 0.160176295041961 -0.106666666666667 0.165666666666667 6.37369074948746 10.4625429808104 -0.106666666666667 0.165666666666667 0.230478768662385 0.0898971041215149 -1.35087124115621 2.06131981223249 Q12830 BPTF Q12830.S1769.p_BPTF Q12830_S1769s _1_1_1769_1769 Q12830 Q12830|Q12830-2|Q12830-4 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24549.24549.3 11.87 11.48 2.418 6 1 1 0 700.3858 2019.1738 S1769s TMT10 1761 (K) LSTPSTGGsVDIISVK (E) LS(0.0)T(0.0)PS(0.0)T(0.0)GGS(0.99)VDIIS(0.0)VK K:TMT10,s:Phosphorylated S BPTF 340995.1 1 21 94.1 610.41 HUMAN 1 -6.3737 10.4625 STPVPLISPKRQIRS-p Q9ULU4-19;S574-p STPVPLISPKRQIRS 0.589224306297175 0.00228267556193667 -0.0726666666666667 -0.761 4.23043575003456 40.7836207166038 -0.0726666666666667 -0.762724566713309 0.377534309062199 8.34906665635146e-05 -0.960929206430427 -10.4895035068173 Q9ULU4 ZMYND8 Q9ULU4.19.S574.p_ZMYND8 Q9ULU4-19_S574s _1_1_574_574 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-9|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-18|Q9ULU4-21|Q9ULU4-8|Q9ULU4-23|Q9ULU4-15|A0A087WYS3|Q9ULU4-11|Q9ULU4-10|Q9ULU4-13|Q9ULU4-20|Q9ULU4-5|Q9ULU4-17|Q9ULU4-6|Q9ULU4-3|A0A087WV57|Q9ULU4-4 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23225.23225.2 21.79 17.74 2.664 5 1 1 0 1303.1981 2525.4227 S574s TMT10 558 (K) ELSESVQQQSTPVPLIsPK (R) ELS(0.0)ES(0.0)VQQQS(0.0)T(0.0)PVPLIS(0.99)PK K:TMT10,s:Phosphorylated S ZMYND8 139738.7 6 11 57.1 712.18 HUMAN 1 -4.2304 -40.7836 STPVRSVSENSLVAM-p Q13322;S428-p STPVRSVSENSLVAM 0.675455973356952 0.568960609007094 -0.0613333333333333 -0.0553333333333333 3.19366609982345 3.29976463581431 -0.0613333333333333 -0.0553333333333333 0.479328652198297 0.46776049069604 -0.759480908733326 -0.78055113071145 Q13322 GRB10 Q13322.S428.p_GRB10 Q13322_S428s _1_1_428_428 Q13322 Q13322|Q13322-4|Q13322-2|Q13322-3 Growth factor receptor-bound protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22466.22466.2 14.74 14.74 2.262 5 1 1 0 1097.5058 2114.0385 S428s TMT10 426 (R) SVsENSLVAMDFSGQTGR (V) S(0.0)VS(0.99)ENS(0.0)LVAMDFS(0.0)GQT(0.0)GR s:Phosphorylated S GRB10 68200.1 4 6 2006.1 102.87 HUMAN 1 -3.1937 -3.2998 STQCCPGSPVAQTES-p Q12802-2;S345-p STQCCPGSPVAQTES 0.659007682953711 0.449508513155425 0.085 0.115666666666667 3.39755627028831 4.62873223089568 0.085 0.115666666666667 0.45734546074252 0.344450466217106 0.800065799302472 1.03536341304006 Q12802 AKAP13 Q12802.2.S345.p_AKAP13 Q12802-2_S345s _1_1_345_345 Q12802-2 Q12802-2|Q12802-4 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22921.22921.3 28.67 29.03 1.142 12 1 1 0 1508.9854 4444.9388 S345s TMT10 330 (R) LSSSEETESTQCCPGsPVAQTESPCDLSSIVEEENTDR (S) LS(0.0)S(0.0)S(0.0)EET(0.0)ES(0.0)T(0.0)QCCPGS(0.99)PVAQT(0.0)ES(0.0)PCDLS(0.0)S(0.0)IVEEENT(0.0)DR C:Carbamidomethylation,s:Phosphorylated S AKAP13 310921 5 1 66.1 683.25 HUMAN 1 3.3976 4.6287 STQPRPDSWGEDNWE-p E9PS17;S754-p STQPRPDSWGEDNWE 0.0739261060777586 0.14504070594466 -0.421 -0.149333333333333 24.2897250271908 11.0443471867934 -0.421 -0.149333333333333 0.00372415284918254 0.078625836931838 -4.86610618622967 -2.16290076323645 E9PS17 NotFound E9PS17.S754.p_NotFound E9PS17_S754s _1_1_754_754 E9PS17 Q96KG9|Q96KG9-2|E9PS17|Q96KG9-3 N-terminal kinase-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23806.23806.5 20.84 20.84 3.578 7 1 1 0 797.5667 3903.8372 S754s TMT10 736 (K) GDPFATLSARPSTQPRPDsWGEDNWEGLETDSR (K) GDPFAT(0.0)LS(0.0)ARPS(0.0)T(0.0)QPRPDS(0.99)WGEDNWEGLET(0.0)DS(0.0)R s:Phosphorylated S SCYL1 86401.8 14 5 1407.1 145.7 HUMAN 1 -24.2897 -11.0443 STQSANSSPDEDTEV-p Q03164-3;S2395-p STQSANSSPDEDTEV 0.949715369091024 0.706725828471845 0.00966666666666666 0.0366666666666667 0.443366484382702 2.07119955593852 0.00966666666666667 0.0366666666666667 0.902949270702484 0.62069756894044 0.127764504545304 0.524450891538114 Q03164 KMT2A Q03164.3.S2395.p_KMT2A Q03164-3_S2394sS2395s_2_2_2394_2395 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4336.4336.3 24.26 24.26 5.993 7 2 2 0 1022.4119 2905.2881 S2394s S2395s Hydrogen 2380 (R) NDRDQHTDSTQSANssPDEDTEVK (T) NDRDQHT(0.0)DS(0.0)T(0.0)QS(0.0)ANS(0.99)S(0.99)PDEDT(0.0)EVK K:TMT10-Lys-Only,s:Phosphorylated S KMT2A 436608.3 6 51 26.1 936.8 HUMAN 1 0.4434 2.0712 STRDLRASPKPTSKS-p O43166;S1528-p STRDLRASPKPTSKS 0.657493781284077 0.017780505628062 -0.0593333333333333 -0.375 3.41548930189179 24.1096330422599 -0.0593333333333333 -0.375 0.455460868355238 0.00388183164196651 -0.803610131240198 -4.81601766710265 O43166 SIPA1L1 O43166.S1528.p_SIPA1L1 O43166_S1528s _1_1_1528_1528 O43166 O43166|O43166-2|O43166-3|F5GYF8 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8250.8250.4 10.97 8.42 5.877 3 1 1 0 492.5378 1887.1631 S1528s TMT10 1524 (R) DLRAsPKPTSK (S) DLRAS(0.99)PKPT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SIPA1L1 201223.1 6 23 46.1 777.88 HUMAN 1 -3.4155 -24.1096 STRDPSASNGGGSPA-p O60504-2;S26-p STRDPSASNGGGSPA 0.387340319727748 0.807821498742584 0.129 0.0246666666666667 7.61733366241496 1.29736041615471 0.129 0.0246666666666667 0.173087870071417 0.741760936712155 1.56869882883233 0.346854626947561 O60504 SORBS3 O60504.2.S26.p_SORBS3 O60504-2_S26s_1_1_26_26 O60504-2 O60504|O60504-2 Isoform Beta of Vinexin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3668.3668.3 14.13 14.13 1.442 3 1 1 0 675.6459 1943.9732 S26s N27n Hydrogen 22 (R) DPSAsnGGGSPARREEK (K) DPS(0.0)AS(0.99)N(1.0)GGGS(0.0)PARREEK K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated SORBS3 36912.6 4 3 1539.1 133.11 HUMAN 1 7.6173 1.2974 STRESWVSPRKRGLS-p Q8IYH5;S82-p STRESWVSPRKRGLS 0.0617660610365025 0.00114483917342921 -0.530666666666667 -1.27033333333333 26.3389026350307 48.7328489607312 -0.530666666666667 -1.27033333333333 0.00232332377412226 1.33879815112409e-05 -5.39106981430294 -14.8540356363513 Q8IYH5 ZZZ3 Q8IYH5.S82.p_ZZZ3 Q8IYH5_S82s _1_1_82_82 Q8IYH5 Q8IYH5|Q8IYH5-2|Q8IYH5-4 ZZ-type zinc finger-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10889.10889.3 11.19 7.24 3.852 2 1 1 0 509.609 1446.8469 S82s TMT10 78 (R) ESWVsPRK (R) ES(0.0)WVS(0.99)PRK K:TMT10,s:Phosphorylated S ZZZ3 103390.7 1 1 1027.1 186.83 HUMAN 1 -26.3389 -48.7328 STRFDMGSLRREGFQ-p Q9Y4K3;S507-p STRFDMGSLRREGFQ 0.498832140538553 0.106545584449678 -0.201 0.320333333333333 5.56574168476369 12.8460626040736 -0.201 0.320333333333333 0.277604071553038 0.051927060613849 -1.20679748125198 2.48202233023489 Q9Y4K3 TRAF6 Q9Y4K3.S507.p_TRAF6 Q9Y4K3_S507s _1_1_507_507 Q9Y4K3 Q9Y4K3 TNF receptor-associated factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13796.13796.3 8.36 3.38 99 1 1 1 0 430.8775 1210.6564 S507s TMT10 503 (R) FDMGsLRR (E) FDMGS(1.0)LRR s:Phosphorylated S TRAF6 61283.8 1 1 6977.1 8.36 HUMAN 1 -5.5657 12.8461 STRGSVHSLDAGLLL-p Q15276;S377-p STRGSVHSLDAGLLL 0.704571607940758 0.283665300503301 0.0613333333333333 0.147 2.8593903234037 7.21562421710873 0.0613333333333333 0.147 0.517679500367108 0.189861793166365 0.691705265810521 1.49828000845547 Q15276 RABEP1 Q15276.S377.p_RABEP1 Q15276_S377s _1_1_377_377 Q15276 Q15276|Q15276-2 Rab GTPase-binding effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27518.27518.2 13.52 13.52 1.427 4 1 1 0 1153.5803 2226.1968 S377s Hydrogen 373 (R) GSVHsLDAGLLLPSGDPFSK (S) GS(0.0)VHS(0.99)LDAGLLLPS(0.0)GDPFS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S RABEP1 99688.1 9 2 933.1 198.92 HUMAN 1 2.8594 7.2156 STRLGTLSPAFSTRV-p Q7KZF4;S781-p STRLGTLSPAFSTRV 0.971842697100907 0.733519223223441 -0.00566666666666666 -0.0416666666666667 0.240337647499907 1.8560097354186 -0.00566666666666666 -0.0416666666666667 0.946163597872417 0.652227380390031 -0.070716241659459 -0.476618947475568 Q7KZF4 SND1 Q7KZF4.S781.p_SND1 Q7KZF4_S781s _1_1_781_781 Q7KZF4 Q7KZF4 Staphylococcal nuclease domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21157.21157.2 12.96 12.96 1.644 4 1 1 0 729.882 1378.7892 S781s TMT10 777 (R) LGTLsPAFSTR (V) LGT(0.0)LS(0.99)PAFS(0.0)T(0.0)R s:Phosphorylated S SND1 102679.8 1 6 1505.1 135.67 HUMAN 1 -0.2403 -1.856 STRPPTLSPIPHIPR-p P06400;S780-p STRPPTLSPIPHIPR 0.206260692780743 0.00636767233162613 -0.199666666666667 -0.528333333333333 13.2577393040465 31.6111401018753 -0.199666666666667 -0.528333333333333 0.0472308835041789 0.000690058627140307 -2.5576155606533 -6.92593163130708 P06400 RB1 P06400.S780.p_RB1 P06400_S780s _1_1_780_780 P06400 P06400 Retinoblastoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24538.24538.4 22.47 22.47 2.181 6 1 1 0 696.1286 2701.5351 S780s TMT10 766 (K) TNILQYASTRPPTLsPIPHIPR (S) T(0.0)NILQY(0.0)AS(0.0)T(0.0)RPPT(0.0)LS(0.99)PIPHIPR s:Phosphorylated S RB1 107013.3 6 6 155.1 502.88 HUMAN 1 -13.2577 -31.6111 STRRQPKTPLEKRDV-p P46013;T1393-p STRRQPKTPLEKRDV 0.887925520796663 0.0377955988633518 -0.0233333333333333 -0.401333333333333 1.00459981352894 19.1064343250124 -0.0233333333333333 -0.401333333333333 0.793487370365727 0.0122844740572965 -0.275031844560068 -3.6864968974358 P46013 MKI67 P46013.T1393.p_MKI67 P46013_T1393t _1_1_1393_1393 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9287.9287.3 7.1 7.1 99 1 1 1 0 570.0051 1628.035 T1393t TMT10 1390 (R) QPKtPLEK (R) QPKT(1.0)PLEK K:TMT10,t:Phosphorylated T MKI67 360912.4 2 44 5.1 1918.46 HUMAN 1 -1.0046 -19.1064 STRSVDISPTRLHSL-p Q9P2Q2;S694-p STRSVDISPTRLHSL 0.473025507918826 0.0902486627118673 -0.115 -0.216333333333333 5.99030791759806 13.8197194851173 -0.115 -0.216333333333333 0.251749842916335 0.0414980845771119 -1.28283681655333 -2.65830815372875 Q9P2Q2 FRMD4A Q9P2Q2.S694.p_FRMD4A Q9P2Q2_S694s _1_1_694_694 Q9P2Q2 Q9P2Q2 FERM domain-containing protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20897.20897.4 15.5 15.5 1.174 4 1 1 0 565.3059 2178.2345 S694s TMT10 690 (R) SVDIsPTRLHSLALHFR (H) S(0.0)VDIS(0.99)PT(0.0)RLHS(0.0)LALHFR s:Phosphorylated S FRMD4A 116026.8 4 8 787.1 225.06 HUMAN 1 -5.9903 -13.8197 STRTRSPSPDDILER-p Q13523;S580-p STRTRSPSPDDILER 0.0654149293186431 0.0263581786161247 -0.572666666666667 -0.62 25.5779297497578 21.4505434515318 -0.572666666666667 -0.62 0.00276826094081535 0.00716053801686874 -5.19165360643933 -4.19310885826289 Q13523 PRPF4B Q13523.S580.p_PRPF4B Q13523_S578sS580s_2_2_578_580 Q13523 Q13523 Serine/threonine-protein kinase PRP4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.11088.11671.2 10.22 10.22 1.422 3 2 2 0 773.3197 1385.7019 S578s S580s Hydrogen 576 (R) TRsPsPDDILER (V) T(0.0)RS(0.99)PS(0.99)PDDILER s:Phosphorylated S PRPF4B 117327.1 4 42 70.1 666.55 HUMAN 1 -25.5779 -21.4505 STSAPQMSPGSSDNQ-p Q14157-5;S467-p STSAPQMSPGSSDNQ 0.711188084071652 0.835128585578059 0.0526666666666667 0.0253333333333333 2.78356563584228 1.09704820562812 0.0526666666666667 0.0253333333333334 0.526797173866193 0.776774892324675 0.676098429052908 0.298018113739959 Q14157 UBAP2L Q14157.5.S467.p_UBAP2L Q14157-5_S467s_1_1_467_467 Q14157-5 Q14157|F8W726|Q14157-3|Q14157-1|Q14157-4|Q14157-5 Isoform 5 of Ubiquitin-associated protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.6416.6416.2 18 18 1.134 9 1 1 0 1543.7104 2990.4526 M466m S467s TMT10 460 (K) STSAPQmsPGSSDNQSSSPQPAQQK (L) S(0.0)T(0.0)S(0.0)APQM(1.0)S(0.99)PGS(0.0)S(0.0)DNQS(0.0)S(0.0)S(0.0)PQPAQQK K:TMT10,m:Oxidized methionine,s:Phosphorylated S UBAP2L 116866.1 27 16 189.1 467.5 HUMAN 1 2.7836 1.097 STSDLGASGKHGGNV-p Q8TEP8-3;S2090-p STSDLGASGKHGGNV 0.155206909012073 0.00682718269668477 -0.289 -0.595666666666667 16.2556795545784 31.0763551318646 -0.289 -0.595666666666667 0.0236827453123865 0.00078048486694382 -3.11743862936252 -6.75519373268382 Q8TEP8 NotFound Q8TEP8.3.S2090.p_NotFound Q8TEP8-3_S2090s _1_1_2090_2090 Q8TEP8-3 Q8TEP8-3|A0A0A0MR42 Isoform 3 of Centrosomal protein of 192 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14108.14108.2 13.09 13.09 4.739 5 1 1 0 930.9733 1780.9693 S2090s TMT10 2079 (K) ASLESTSDLGAsGK (H) AS(0.0)LES(0.0)T(0.0)S(0.0)DLGAS(0.99)GK K:TMT10,s:Phosphorylated S CEP192 281787.5 1 17 491.1 293.99 HUMAN 1 -16.2557 -31.0764 STSEYSQSPKMESLS-p Q12888-2;S530-p STSEYSQSPKMESLS 0.446779580872583 0.0128825229095723 0.124333333333333 0.404 6.45691599872347 26.3198874681982 0.124333333333333 0.404 0.226104080499848 0.00233351852624112 1.3655725702439 5.37884012370902 Q12888 TP53BP1 Q12888.2.S530.p_TP53BP1 Q12888-2_S530s _1_1_530_530 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20759.20759.2 17.33 11.61 2.113 6 1 1 0 1005.0063 1929.0403 S530s TMT10 520 (K) LMLSTSEYSQsPK (M) LMLS(0.0)T(0.0)S(0.0)EY(0.0)S(0.0)QS(0.99)PK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 7 24 3.1 2297.07 HUMAN 1 6.4569 26.3199 STSFMSVSPSKEIKI-p Q8TB45;S265-p STSFMSVSPSKEIKI 0.310256366939808 0.470271380686201 -0.146 -0.0936666666666667 9.49999462744942 4.36744521751925 -0.146 -0.0936666666666666 0.112201984232435 0.365809919823025 -1.89495733383613 -0.986568569890846 Q8TB45 DEPTOR Q8TB45.S265.p_DEPTOR Q8TB45_S265s _1_1_265_265 Q8TB45 Q8TB45|Q8TB45-2 DEP domain-containing mTOR-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17760.17760.3 14.19 14.19 1.671 6 1 1 0 565.9535 1615.8766 S265s TMT10 258 (K) STSFMSVsPSK (E) S(0.0)T(0.0)S(0.0)FMS(0.0)VS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S DEPTOR 46806.5 6 7 1526.1 133.99 HUMAN 1 -9.5 -4.3674 STSGKRSSDGSLSHE-p Q13136;S239-p STSGKRSSDGSLSHE 0.282535045693496 0.717479737699147 -0.152 0.0423333333333334 10.3754123566674 1.98405864616515 -0.152 0.0423333333333334 0.0917188845429567 0.633277612753806 -2.04701462398766 0.505210326622068 Q13136 PPFIA1 Q13136.S239.p_PPFIA1 Q13136_S239sS242s_2_2_239_242 Q13136 Q13136|Q13136-2|E9PJZ7 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13401.13401.2 10.76 10.76 1.278 4 2 2 0 1046.965 1932.9915 S239s S242s TMT10 238 (R) SsDGsLSHEEDLAK (V) S(0.0)S(0.99)DGS(0.99)LS(0.0)HEEDLAK K:TMT10,s:Phosphorylated S PPFIA1 136347 7 37 248.1 410.18 HUMAN 1 -10.3754 1.9841 STSKATISDEEIERQ-p Q9UQN3;S199-p STSKATISDEEIERQ 0.693213743392238 0.17940331200591 0.102666666666667 -0.189 2.98559659719467 9.8125648338614 0.102666666666667 -0.189 0.502852183506274 0.104410341591597 0.717485284281676 -1.9483928865158 Q9UQN3 CHMP2B Q9UQN3.S199.p_CHMP2B Q9UQN3_S199s _1_1_199_199 Q9UQN3 Q9UQN3|C9J0A7|Q9UQN3-2 Charged multivesicular body protein 2b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14566.14566.3 11.38 9.77 1.206 7 1 1 0 853.7697 2479.3292 S199s TMT10 187 (R) SLPSASTSKATIsDEEIER (Q) S(0.0)LPS(0.0)AS(0.0)T(0.0)S(0.0)KAT(0.0)IS(0.99)DEEIER K:TMT10,s:Phosphorylated S CHMP2B 23963.2 4 3 3305.1 54.38 HUMAN 1 2.9856 -9.8126 STSKMQESPKLPQQS-p O95359;S2359-p STSKMQESPKLPQQS 0.0147380963983692 0.00129870598737143 -1.09566666666667 -1.12766666666667 43.6579927130984 47.0534615755216 -1.0998735642552 -1.12766666666667 4.30725643683477e-05 1.97085122870715e-05 -11.936627029413 -13.8090671551376 O95359 TACC2 O95359.S2359.p_TACC2 O95359_S2359s _1_1_2359_2359 O95359 O95359|E9PBC6|O95359-6|Q4VXL4|O95359-2|O95359-3|E7EMZ9|O95359-5|Q4VXL8|O95359-1|D6RAA5 Transforming acidic coiled-coil-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23199.23199.5 28.1 22.64 4.888 8 1 1 0 921.2541 4522.2564 S2359s TMT10 2356 (K) MQEsPKLPQQSYNFDPDTCDESVDPFKTSSK (T) MQES(0.99)PKLPQQS(0.0)Y(0.0)NFDPDT(0.0)CDES(0.0)VDPFKT(0.0)S(0.0)S(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TACC2 311818.1 8 18 101.1 597.93 HUMAN 1 -43.658 -47.0535 STSKPQESPKGKRKL-p P18887;S241-p STSKPQESPKGKRKL 0.176527526104725 0.000952253650599092 -0.24 -1.37566666666667 14.9475933312206 53.5597016096585 -0.24 -1.37566666666667 0.0320066828776276 4.40585133712087e-06 -2.86862802451673 -18.2982915223175 P18887 XRCC1 P18887.S241.p_XRCC1 P18887_S241s _1_1_241_241 P18887 P18887|F5H8D7 DNA repair protein XRCC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9436.9436.2 16.56 11.24 2.733 4 1 1 0 1049.0812 2017.1897 S241s TMT10 231 (R) AIGSTSKPQEsPK (G) AIGS(0.0)T(0.0)S(0.0)KPQES(0.99)PK K:TMT10,s:Phosphorylated S XRCC1 69817.6 11 5 433.1 315.31 HUMAN 1 -14.9476 -53.5597 STSNGKMSPTRYHAN-p Q6NT76-5;S133-p STSNGKMSPTRYHAN 0.324195658268258 0.00734738797149871 0.138666666666667 0.579666666666667 9.16235046130038 30.5220472657962 0.138666666666667 0.579666666666667 0.121273232545344 0.000886737904920982 1.83647025874083 6.58187107563872 Q6NT76 HMBOX1 Q6NT76.5.S133.p_HMBOX1 Q6NT76-5_S133s _1_1_133_133 Q6NT76-5 Q6NT76-5|Q6NT76-3|Q6NT76-2|H0YKJ1|E5RGZ2|Q6NT76-4 Isoform 5 of Homeobox-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7954.7954.4 12.76 7.79 1.726 7 1 1 0 716.1045 2781.4289 S133s TMT10 125 (R) LSTSNGKMsPTRYHANSMGQR (S) LS(0.0)T(0.0)S(0.0)NGKMS(0.99)PT(0.0)RY(0.0)HANS(0.0)MGQR K:TMT10,s:Phosphorylated S HMBOX1 50037.1 4 1 2310.1 88.47 HUMAN 1 9.1624 30.522 STSPGRLSPDFAEEL-p A0A0G2JNZ2;S1566-p STSPGRLSPDFAEEL 0.922241671010614 0.0729684146772476 -0.0153333333333333 0.205 0.689945266582725 15.1002368830342 -0.0153333333333333 0.205 0.853110865565375 0.0309012687900317 -0.194187740916205 2.89536705562101 A0A0G2JNZ2 SCRIB A0A0G2JNZ2.S1566.p_SCRIB A0A0G2JNZ2_S1566s _1_1_1566_1566 A0A0G2JNZ2 Q14160|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26383.26585.5 24.47 24.47 1.163 9 1 1 0 865.63 4244.156 S1566s TMT10 1536 (R) LAEAPSPAPTPSPTPVEDLGPQTSTSPGRLsPDFAEELR (S) LAEAPS(0.0)PAPT(0.0)PS(0.0)PT(0.0)PVEDLGPQT(0.0)S(0.0)T(0.0)S(0.0)PGRLS(0.99)PDFAEELR s:Phosphorylated S SCRIB 175881.7 2 2 22.2 1004.81 HUMAN 1 -0.6899 15.1002 STSPIIGSPPVRAVP-p Q86TB9-4;S184-p STSPIIGSPPVRAVP 0.319863470714702 0.0213404996074559 -0.186666666666667 -0.313 9.26728144915677 22.848404187525 -0.186666666666667 -0.313 0.118378233544297 0.00518990706721064 -1.85464094611922 -4.51366924143232 Q86TB9 PATL1 Q86TB9.4.S184.p_PATL1 Q86TB9-4_S184s _1_1_184_184 Q86TB9-4 Q86TB9|Q86TB9-4|Q86TB9-2 Isoform 4 of Protein PAT1 homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15841.15841.2 11.88 8.23 4.579 4 1 1 0 760.4075 1439.8419 S184s TMT10 177 (R) STSPIIGsPPVR (A) S(0.0)T(0.0)S(0.0)PIIGS(0.99)PPVR s:Phosphorylated S PATL1 80249 2 3 1540.1 133.07 HUMAN 1 -9.2673 -22.8484 STSQPDPSPDRSANT-p P20749;S374-p STSQPDPSPDRSANT 0.391621741741869 0.176028421721948 0.134333333333333 0.190333333333333 7.50656026142113 9.92044379563654 0.134333333333333 0.190333333333333 0.177559524717851 0.101848730583888 1.54942445651659 1.96710372111516 P20749 BCL3 P20749.S374.p_BCL3 P20749_S374s _1_1_374_374 P20749 P20749 B-cell lymphoma 3 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4498.4498.4 15.86 8.23 3.309 11 1 1 0 774.6109 3015.4565 S374s TMT10 362 (K) ATRPASTSQPDPsPDRSANTSPESSSR (L) AT(0.0)RPAS(0.0)T(0.0)S(0.0)QPDPS(0.99)PDRS(0.0)ANT(0.0)S(0.0)PES(0.0)S(0.0)S(0.0)R s:Phosphorylated S BCL3 47982.1 2 2 2461.1 82.37 HUMAN 1 7.5066 9.9204 STSSTGGSPVRKSEE-p Q7Z6E9;S1277-p STSSTGGSPVRKSEE 0.56732930889055 0.441507325968915 0.0783333333333333 -0.0946666666666666 4.53452996964405 4.72801201555247 0.0783333333333334 -0.0946666666666666 0.352003517272088 0.336665642920156 1.01802269742221 -1.05376735342004 Q7Z6E9 RBBP6 Q7Z6E9.S1277.p_RBBP6 Q7Z6E9_S1277s _1_1_1277_1277 Q7Z6E9 Q7Z6E9|Q7Z6E9-2 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11391.11391.3 24.97 24.97 1.184 14 1 1 0 990.8105 2890.4479 S1277s Hydrogen 1254 (R) KVTGTEGSSSTLVDYTSTSSTGGsPVR (K) KVT(0.0)GT(0.0)EGS(0.0)S(0.0)S(0.0)T(0.0)LVDY(0.0)T(0.0)S(0.0)T(0.0)S(0.0)S(0.0)T(0.0)GGS(0.99)PVR K:TMT10-Lys-Only,s:Phosphorylated S RBBP6 202473.6 23 19 27.1 935.6 HUMAN 1 4.5345 -4.728 STSYQELSEELVQVV-p Q9H813;S14-p STSYQELSEELVQVV 0.377043100249076 0.934261536950379 -0.119333333333333 0.01 7.82754881469959 0.417014425120611 -0.119333333333333 0.01 0.164909288728281 0.908444829616114 -1.60523001385461 0.12047578661742 Q9H813 TMEM206 Q9H813.S14.p_TMEM206 Q9H813_S14s _1_1_14_14 Q9H813 Q9H813 Transmembrane protein 206 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31745.31745.5 22.79 22.79 5.193 7 1 1 0 799.3899 3912.9602 S14s TMT10 7 (R) STSYQELsEELVQVVENSELADEQDKETVR (V) S(0.0)T(0.0)S(0.0)Y(0.0)QELS(0.99)EELVQVVENS(0.0)ELADEQDKET(0.0)VR K:TMT10,s:Phosphorylated S TMEM206 40327.6 3 3 3586.1 47.67 HUMAN 1 -7.8275 0.417 STTETPASPAHTTPQ-p P15336;S328-p STTETPASPAHTTPQ 0.504677687418261 0.169996117854872 0.193 0.317666666666667 5.48391248985039 10.118992507731 0.193 0.317666666666667 0.28288423884472 0.0972972911422884 1.19204500837953 2.00157102504527 P15336 ATF2 P15336.S328.p_ATF2 P15336_S328s _1_1_328_328 P15336 P15336|P15336-5|P15336-4|E9PBF9|B8ZZU6 Cyclic AMP-dependent transcription factor ATF-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7327.7327.4 22.74 22.74 2 16 1 1 0 1080.7606 4240.0551 S328s TMT10 305 (R) TQSEESRPQSLQQPATSTTETPAsPAHTTPQTQSTSGR (R) T(0.0)QS(0.0)EES(0.0)RPQS(0.0)LQQPAT(0.0)S(0.0)T(0.0)T(0.0)ET(0.0)PAS(0.99)PAHT(0.0)T(0.0)PQT(0.0)QS(0.0)T(0.0)S(0.0)GR s:Phosphorylated S ATF2 54821.7 1 5 1174.1 169.92 HUMAN 1 5.4839 10.119 STTGFNFSFKSALSP-p P49792;S2270-p STTGFNFSFKSALSP 0.158414346785039 0.00443089596482278 -0.265666666666667 -0.588 16.0298019659352 34.5686416961003 -0.265666666666667 -0.588 0.0249470848063263 0.000349249530041797 -3.07391466447575 -7.93675814086222 P49792 RANBP2 P49792.S2270.p_RANBP2 P49792_S2270s _1_1_2270_2270 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.29198.29198.2 15.68 15.68 4.564 4 1 1 0 1003.9891 1927.0002 S2270s TMT10 2260 (R) FGESTTGFNFsFK (S) FGES(0.0)T(0.0)T(0.0)GFNFS(0.99)FK K:TMT10,s:Phosphorylated S RANBP2 362585.9 4 44 9.1 1298.62 HUMAN 1 -16.0298 -34.5686 STTGLSATPPASLPG-p P15056;T401-p STTGLSATPPASLPG 0.358543296993659 0.0649597506621915 -0.147 -0.231666666666667 8.27596711595138 15.8002314475795 -0.147 -0.231666666666667 0.14873161317118 0.0263012782135112 -1.68300275672291 -3.02781949087548 P15056 BRAF P15056.T401.p_BRAF P15056_T401t _1_1_401_401 P15056 P15056 Serine/threonine-protein kinase B-raf HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21791.21791.4 17.85 14.85 2.226 8 1 1 0 857.4389 3346.7643 T401t TMT10 385 (R) DQGFRGDGGSTTGLSAtPPASLPGSLTNVK (A) DQGFRGDGGS(0.0)T(0.0)T(0.0)GLS(0.0)AT(0.99)PPAS(0.0)LPGS(0.0)LT(0.0)NVK K:TMT10,t:Phosphorylated T BRAF 85177.1 8 21 441.1 311.96 HUMAN 1 -8.276 -15.8002 STTIIQGSPAALEER-p Q8TEP8-3;S1078-p STTIIQGSPAALEER 0.0963407255186167 0.947244161865194 0.54 0.0113333333333333 21.5499565209629 0.336218736706382 0.54 0.0113333333333333 0.00699849002448286 0.925503629684887 4.21976758888113 0.0979334997197612 Q8TEP8 NotFound Q8TEP8.3.S1078.p_NotFound Q8TEP8-3_S1078s _1_1_1078_1078 Q8TEP8-3 Q8TEP8-3|A0A0A0MR42 Isoform 3 of Centrosomal protein of 192 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28365.28365.5 14.67 14.67 4.288 16 1 1 0 1105.9453 5445.7325 S1078s TMT10 1040 (R) LTYVSEPESSYPTTATDDALEDRKSDITSELSTTIIQGsPAALEER (A) LT(0.0)Y(0.0)VS(0.0)EPES(0.0)S(0.0)Y(0.0)PT(0.0)T(0.0)AT(0.0)DDALEDRKS(0.0)DIT(0.0)S(0.0)ELS(0.0)T(0.0)T(0.0)IIQGS(0.99)PAALEER K:TMT10,s:Phosphorylated S CEP192 281787.5 1 12 491.1 293.99 HUMAN 1 21.55 0.3362 STTKRPKSIDDSEME-p Q14938;S280-p STTKRPKSIDDSEME 0.131201166266485 0.72769248134084 0.382666666666667 -0.0433333333333333 18.2351952592942 1.90041351812492 0.382666666666667 -0.0433333333333333 0.0150134490359868 0.645592755305007 3.51002159809886 -0.486577708215588 Q14938 NFIX Q14938.S280.p_NFIX Q14938_S280s _1_1_280_280 Q14938 Q14938|Q14938-4|Q14938-2|K7EN08|Q14938-3|Q14938-5|Q14938-6|C9JWJ8 Nuclear factor 1 X-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19951.19951.4 17.44 17.44 1.139 5 1 1 0 809.6412 3155.572 S280s TMT10 277 (K) RPKsIDDSEMESPVDDVFYPGTGR (S) RPKS(0.99)IDDS(0.0)EMES(0.0)PVDDVFY(0.0)PGT(0.0)GR K:TMT10,s:Phosphorylated S NFIX 55610.7 1 3 1219.1 165.13 HUMAN 1 18.2352 -1.9004 STTPSVDSDDESVVK-p Q6WKZ4;S202-p STTPSVDSDDESVVK 0.154045884939488 0.0766742196440831 0.283666666666667 -0.247 16.3179987245819 14.8005760761914 0.283666666666667 -0.247 0.0233453359250006 0.0331087201029484 3.12948994997984 -2.83930943229142 Q6WKZ4 RAB11FIP1 Q6WKZ4.S202.p_RAB11FIP1 Q6WKZ4_S202s _1_1_202_202 Q6WKZ4 Q6WKZ4|Q6WKZ4-3|E7EX40|Q6WKZ4-2 Rab11 family-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22458.22458.3 10.53 10.53 1.102 10 1 1 0 1073.5187 3138.5578 S202s TMT10 183 (K) DSGSDTASAIIPSTTPSVDsDDESVVK (D) DS(0.0)GS(0.0)DT(0.0)AS(0.0)AIIPS(0.0)T(0.0)T(0.0)PS(0.0)VDS(0.99)DDES(0.0)VVK K:TMT10,s:Phosphorylated S RAB11FIP1 137564.1 21 2 56.1 721.17 HUMAN 1 16.318 -14.8006 STTSASTSEEEKKKK-p Q8N5F7;S178-p STTSASTSEEEKKKK 0.157130324771318 0.779457434724521 -0.387333333333333 -0.037 16.1212303962018 1.49878186533123 -0.387333333333333 -0.037 0.0244273840440098 0.708144381025951 -3.09150251638154 -0.394660330368288 Q8N5F7 NKAP Q8N5F7.S178.p_NKAP Q8N5F7_S178s _1_1_178_178 Q8N5F7 Q8N5F7 NF-kappa-B-activating protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5432.5432.3 10.1 10.1 1.135 7 1 1 0 718.0377 2072.1326 S178s TMT10 170 (K) KSTTSASTsEEEK (K) KS(0.0)T(0.0)T(0.0)S(0.0)AS(0.0)T(0.0)S(0.99)EEEK K:TMT10,s:Phosphorylated S NKAP 47251.6 3 4 2507.1 80.61 HUMAN 1 -16.1212 -1.4988 STTSLSGSDSETEGK-p Q8N1G2;S53-p STTSLSGSDSETEGK 0.188778224113783 0.00153742933174576 -0.465333333333333 0.887666666666667 14.1876186809938 45.3402433487446 -0.465333333333333 0.887875705056158 0.0381274826306366 2.92398853305511e-05 -2.72743107140885 12.8153842945962 Q8N1G2 CMTR1 Q8N1G2.S53.p_CMTR1 Q8N1G2_S53s _1_1_53_53 Q8N1G2 Q8N1G2 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9879.9879.2 18.82 18.82 1.2 8 1 1 0 1048.002 2015.0181 S53s TMT10 45 (K) ASTTSLSGsDSETEGK (Q) AS(0.0)T(0.0)T(0.0)S(0.0)LS(0.0)GS(0.99)DS(0.0)ET(0.0)EGK K:TMT10,s:Phosphorylated S CMTR1 96231.9 2 2 2841.1 68.37 HUMAN 1 -14.1876 45.3402 STTVGSHSPPETPVL-p Q9ULU4-19;S783-p STTVGSHSPPETPVL 0.539855089249376 0.150929084374469 0.125666666666667 -0.182666666666667 4.94393189957739 10.8014038329855 0.125666666666667 -0.182666666666667 0.320336783151469 0.0831494951495786 1.09377323324752 -2.12041604254998 Q9ULU4 ZMYND8 Q9ULU4.19.S783.p_ZMYND8 Q9ULU4-19_S783s _1_1_783_783 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-2|Q9ULU4-10|Q9ULU4-13|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-18|Q9ULU4-21|Q9ULU4-23|Q9ULU4-15|Q9ULU4-6|Q9ULU4-3|Q9ULU4-4|Q9ULU4-20|Q9ULU4-5|Q9ULU4-9 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12753.12958.3 16.02 13.13 1.274 8 1 1 0 790.7372 2290.224 S783s TMT10 773 (K) TPPSTTVGSHsPPETPVLTR (S) T(0.0)PPS(0.0)T(0.0)T(0.0)VGS(0.0)HS(0.99)PPET(0.0)PVLT(0.0)R s:Phosphorylated S ZMYND8 139738.7 4 16 57.1 712.18 HUMAN 1 4.9439 -10.8014 STVDVKPSPSAAEAD-p Q86VP1-2;S508-p STVDVKPSPSAAEAD 0.351202113945675 0.0108788508013424 -0.151 -0.416666666666667 8.44450102186135 27.5124806872014 -0.151 -0.416666666666667 0.143070435066917 0.00177317635441102 -1.71219597787503 -5.70150466898204 Q86VP1 TAX1BP1 Q86VP1.2.S508.p_TAX1BP1 Q86VP1-2_S508s _1_1_508_508 Q86VP1-2 B8ZZD4|Q86VP1|Q86VP1-2 Isoform 2 of Tax1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26008.26008.4 21.88 18.92 1.116 9 1 1 0 1072.5403 4207.1861 S508s TMT10 487 (K) VNDASVNTDPATSASTVDVKPsPSAAEADFDIVTK (G) VNDAS(0.0)VNT(0.0)DPAT(0.0)S(0.0)AS(0.0)T(0.0)VDVKPS(0.99)PS(0.0)AAEADFDIVT(0.0)K K:TMT10,s:Phosphorylated S TAX1BP1 87225.4 1 6 2039.1 101.24 HUMAN 1 -8.4445 -27.5125 STVEEPVSPMLPPSA-p Q13127;S971-p STVEEPVSPMLPPSA 0.546236180544102 0.129063296352633 0.082 0.218 4.84805506789704 11.7201653512865 0.082 0.218 0.327487323038503 0.067295103416794 1.07613842433023 2.28168847101004 Q13127 REST Q13127.S971.p_REST Q13127_S971s _1_1_971_971 Q13127 Q13127|Q13127-4 RE1-silencing transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23855.23855.4 22.78 17.6 4.23 6 1 1 0 962.7394 3767.9777 S971s TMT10 957 (R) ENLTGINSTVEEPVsPMLPPSAVEEREAVSK (T) ENLT(0.0)GINS(0.0)T(0.0)VEEPVS(0.99)PMLPPS(0.0)AVEEREAVS(0.0)K K:TMT10,s:Phosphorylated S REST 123239.4 4 57 240.5 415.72 HUMAN 1 4.8481 11.7202 STVIDAASGTFDRSV-p Q9H6U6;S823-p STVIDAASGTFDRSV 0.898552099790677 0.367981454245276 -0.03 0.175333333333333 0.908669797270394 5.75685387542815 -0.03 0.175333333333333 0.811209485563354 0.26565293132435 -0.250809654194263 1.24084134624527 Q9H6U6 BCAS3 Q9H6U6.S823.p_BCAS3 Q9H6U6_S823s _1_1_823_823 Q9H6U6 Q9H6U6-8|Q9H6U6-3|Q9H6U6-7|Q9H6U6-2|K7ESE9|Q9H6U6-6 Breast carcinoma-amplified sequence 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20259.20259.3 12.81 12.81 1.206 4 1 1 0 602.2957 1724.9016 S823s TMT10 814 (R) GVSTVIDAAsGTFDR (S) GVS(0.0)T(0.0)VIDAAS(0.99)GT(0.0)FDR s:Phosphorylated S BCAS3 102547.1 1 7 847.1 212.9 HUMAN 1 -0.9087 5.7569 STVRRRYSDFEWLRS-p O60493;S72-p STVRRRYSDFEWLRS 0.195880649499579 0.464447669738477 -0.2 -0.0856666666666666 13.8075696876622 4.44169234812659 -0.2 -0.0856666666666666 0.0416143419245418 0.359609176223911 -2.6576554799593 -1.00048912125451 O60493 SNX3 O60493.S72.p_SNX3 O60493_S72s _1_1_72_72 O60493 O60493|O60493-4|O60493-3 Sorting nexin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20995.20995.3 12.84 11.63 12.836 2 1 1 0 527.5875 1500.7797 S72s TMT10 70 (R) RYsDFEWLR (S) RY(0.0)S(0.99)DFEWLR s:Phosphorylated S SNX3 18819.1 4 2 3523.1 49.07 HUMAN 1 -13.8076 -4.4417 STYQIKGSPNLTLPK-p Q12923-4;S2037-p STYQIKGSPNLTLPK 0.503218271386668 0.269598030778144 -0.182 -0.107333333333333 5.50214371577991 7.49661036211476 -0.182 -0.107333333333333 0.281699209594077 0.177966788638849 -1.19533472480253 -1.5472339846898 Q12923 PTPN13 Q12923.4.S2037.p_PTPN13 Q12923-4_S2037s _1_1_2037_2037 Q12923-4 Q12923-4|Q12923-3|Q12923-2 Isoform 4 of Tyrosine-protein phosphatase non-receptor type 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17922.17922.2 11.13 5.72 2.369 2 1 1 0 732.9154 1384.8564 S2037s TMT10 2036 (K) GsPNLTLPK (E) GS(0.99)PNLT(0.0)LPK K:TMT10,s:Phosphorylated S PTPN13 279614.3 3 14 518.1 284.65 HUMAN 1 -5.5021 -7.4966 STYQLKDTELIYGAK-p P29475-5;T404-p STYQLKDTELIYGAK 0.168689953351787 0.0147793875061614 0.472666666666667 0.365 15.4264407492772 25.3475152732442 0.472666666666667 0.365 0.028665262626999 0.00291909663757302 2.95881971820509 5.12581970332705 P29475 NOS1 P29475.5.T404.p_NOS1 P29475-5_T404tS418s_2_2_404_418 P29475-5 P29475-5|C9J5P6|P29475-2|P29475-3 Isoform 5 of Nitric oxide synthase, brain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3816.3816.4 8.08 2.61 2.112 3 2 2 0 595.2794 2217.1726 T404t N416n S418s Hydrogen 403 (K) DtELIYGAKHAWRnAsR (C) DT(0.99)ELIY(0.0)GAKHAWRN(1.0)AS(0.99)R K:TMT10-Lys-Only,t:Phosphorylated T,n:Deamidated,s:Phosphorylated S NOS1 166145.8 1 2 6013.1 14.65 HUMAN 1 15.4264 25.3475 SVACSYLSPKDSRPL-p Q70EL4;S472-p SVACSYLSPKDSRPL 0.7135442097527 0.0235772323254271 -0.0906666666666667 0.308666666666667 2.76168973561937 22.1957966132801 -0.0906666666666667 0.308666666666667 0.529457404640069 0.00603143065064715 -0.671578731503624 4.3621812816392 Q70EL4 USP43 Q70EL4.S472.p_USP43 Q70EL4_S472s _1_1_472_472 Q70EL4 Q70EL4|Q70EL4-4|Q70EL4-3 Ubiquitin carboxyl-terminal hydrolase 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26422.26422.3 20.18 20.18 2.116 4 1 1 0 673.3646 1938.1134 S472s TMT10 461 (R) VVGLSVACSYLsPK (D) VVGLS(0.0)VACS(0.0)Y(0.0)LS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S USP43 124119.2 1 2 817.1 219.69 HUMAN 1 -2.7617 22.1958 SVADRRGSGGHIFRM-p Q96RT1-8;S1253-p SVADRRGSGGHIFRM 0.129751256844141 0.161921260422195 -0.503666666666667 -0.225666666666667 18.3553849157647 10.3974901216048 -0.503666666666667 -0.225666666666667 0.0146036531133801 0.0912538061774258 -3.53454877881141 -2.0499942773231 Q96RT1 ERBB2IP Q96RT1.8.S1253.p_ERBB2IP Q96RT1-8_S1253s _1_1_1253_1253 Q96RT1-8 Q96RT1-8|B4DIP2 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4262.4262.3 8.43 8.43 99 1 1 1 0 432.5573 1215.6908 S1253s TMT10 1251 (R) RGsGGHIFR (M) RGS(1.0)GGHIFR s:Phosphorylated S ERBIN 159762.8 1 27 81.1 633.5 HUMAN 1 -18.3554 -10.3975 SVAKLEKTIDDLEDK-p P06753-2;T216-p SVAKLEKTIDDLEDK 0.0917156286406609 0.00575422933881225 -0.384666666666667 -0.637 22.0916087947888 32.4119674570643 -0.384666666666667 -0.637 0.00617787505351211 0.000573856432729949 -4.34290938284324 -7.18826969782713 P06753 TPM3 P06753.2.T216.p_TPM3 P06753-2_T216t _1_1_216_216 P06753-2 J3KN67|P06753-2|P06753-5|Q5HYB6|A0A087WWU8|Q5VU61 Isoform 2 of Tropomyosin alpha-3 chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21840.21840.3 10.75 10.75 99 1 1 1 0 653.0334 1877.1199 T216t TMT10 216 (K) tIDDLEDKLK (C) T(1.0)IDDLEDKLK K:TMT10,t:Phosphorylated T TPM3 29260.4 2 4 2934.1 65.55 HUMAN 1 -22.0916 -32.412 SVANKLGSFGKTLGS-p Q6GQQ9;S508-p SVANKLGSFGKTLGS 0.491359582471312 0.0614106167463853 -0.212333333333333 -0.621333333333333 5.68159030113399 16.1358166121967 -0.212333333333333 -0.621333333333333 0.270296840890094 0.0243454798421102 -1.22762693312546 -3.09210421251328 Q6GQQ9 OTUD7B Q6GQQ9.S508.p_OTUD7B Q6GQQ9_S508s _1_1_508_508 Q6GQQ9 Q6GQQ9|Q6GQQ9-2 OTU domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15198.15198.4 12.61 12.61 6.329 2 1 1 0 555.0649 2137.2696 S508s TMT10 498 (K) RADSVANKLGsFGK (T) RADS(0.0)VANKLGS(0.99)FGK K:TMT10,s:Phosphorylated S OTUD7B 93208.9 5 6 1645.1 123.96 HUMAN 1 -5.6816 -16.1358 SVARKRKSDGSMEDA-p Q8IZT6;S577-p SVARKRKSDGSMEDA 0.20228767245005 0.220273655133793 -0.222666666666667 -0.152 13.4650787199469 8.65053477699785 -0.222666666666667 -0.152 0.0450289819288943 0.136441511632251 -2.59521908636462 -1.74726734294857 Q8IZT6 ASPM Q8IZT6.S577.p_ASPM Q8IZT6_S577s _1_1_577_577 Q8IZT6 Q8IZT6|Q8IZT6-2 Abnormal spindle-like microcephaly-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4493.4493.3 7.9 7.9 1.378 2 1 1 0 668.3304 1923.0118 S577s TMT10 575 (K) RKsDGSMEDANVR (V) RKS(0.99)DGS(0.0)MEDANVR K:TMT10,s:Phosphorylated S ASPM 413444.1 1 8 949.1 196.42 HUMAN 1 -13.4651 -8.6505 SVASDEDTDLETTAS-p Q14161;T401-p SVASDEDTDLETTAS 0.690001442222247 0.0167801058367106 0.058 0.352 3.01971846090157 24.5033383829585 0.058 0.352 0.498916829579797 0.00354540752145239 0.724414501918404 4.9131035417438 Q14161 GIT2 Q14161.T401.p_GIT2 Q14161_S394sS397sT401t_3_3_394_401 Q14161 Q14161|F8WAK2|Q14161-6|Q14161-7|Q14161-11|Q14161-2|F8W822|Q14161-3|Q14161-5|Q14161-4|F8VXI9|Q14161-8|Q14161-10 ARF GTPase-activating protein GIT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16932.16932.5 22.29 22.29 1.743 10 3 3 0 914.1812 4326.9646 S394s S397s T401t TMT10 375 (K) TINNQHSVESQDNDQPDYDsVAsDEDtDLETTASK (T) T(0.0)INNQHS(0.0)VES(0.0)QDNDQPDY(0.0)DS(0.99)VAS(0.99)DEDT(0.99)DLET(0.0)T(0.0)AS(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T GIT2 85168.8 3 19 474.1 301.74 HUMAN 1 3.0197 24.5033 SVASDEDTDQEPLRS-p Q9Y2X7;T392-p SVASDEDTDQEPLRS 0.313339001004687 0.00818760311846468 0.168333333333333 0.458333333333333 9.42469707964742 29.7009637730825 0.168333333333333 0.458333333333333 0.114164293142353 0.00107128154332069 1.88190923047941 6.33174983041615 Q9Y2X7 GIT1 Q9Y2X7.T392.p_GIT1 Q9Y2X7_S385sS388sT392t_3_3_385_392 Q9Y2X7 Q9Y2X7-3|A0A0C4DGN6|J3QRU8 ARF GTPase-activating protein GIT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12764.12976.4 15.7 15.7 4.298 9 3 3 0 1006.4004 3782.6699 S385s S388s T392t TMT10 373 (R) SQSDLDDQHDYDsVAsDEDtDQEPLRSTGATR (S) S(0.0)QS(0.0)DLDDQHDY(0.0)DS(0.99)VAS(0.99)DEDT(0.99)DQEPLRS(0.0)T(0.0)GAT(0.0)R s:Phosphorylated S,t:Phosphorylated T GIT1 85081.2 3 36 474.2 301.74 HUMAN 1 9.4247 29.701 SVASGPISPTNYRQR-p Q9BYK8;S338-p SVASGPISPTNYRQR 0.173514209674655 0.914861599145015 -0.261333333333333 -0.0123333333333333 15.1614241791219 0.543230779642005 -0.261333333333333 -0.0123333333333333 0.030468956592337 0.882423208763744 -2.90878160228368 -0.155006471398367 Q9BYK8 HELZ2 Q9BYK8.S338.p_HELZ2 Q9BYK8_S338s _1_1_338_338 Q9BYK8 Q9BYK8 Helicase with zinc finger domain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12352.12352.3 15.97 15.97 2.962 6 1 1 0 582.2879 1664.8805 S338s TMT10 330 (R) SSVASGPIsPTNYR (Q) S(0.0)S(0.0)VAS(0.0)GPIS(0.99)PT(0.0)NY(0.0)R s:Phosphorylated S HELZ2 298468.2 1 1 4022.1 38.95 HUMAN 1 -15.1614 -0.5432 SVASLNRSPERRKHE-p Q12923-4;S1033-p SVASLNRSPERRKHE 0.982842045127411 0.381351046268219 -0.00333333333333335 -0.129333333333333 0.147857810487686 5.56174217225323 -0.00333333333333335 -0.129333333333333 0.966527508240405 0.277859840944857 -0.0439408195269243 -1.2058096809374 Q12923 PTPN13 Q12923.4.S1033.p_PTPN13 Q12923-4_S1033s _1_1_1033_1033 Q12923-4 Q12923-4|Q12923-3 Isoform 4 of Tyrosine-protein phosphatase non-receptor type 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6135.6135.3 13.36 8.46 4.745 3 1 1 0 508.9286 1444.807 S1033s TMT10 1026 (K) SVASLNRsPER (R) S(0.0)VAS(0.0)LNRS(0.99)PER s:Phosphorylated S PTPN13 279614.3 3 8 518.1 284.65 HUMAN 1 -0.1479 -5.5617 SVATGPMTPQAAAPP-p Q7Z2K8;T877-p SVATGPMTPQAAAPP 0.872093972512128 0.735278535977745 0.0303333333333333 -0.0436666666666667 1.16314821459081 1.84194863299824 0.0303333333333333 -0.0436666666666666 0.765041824588078 0.654342511687881 0.314316210981641 -0.473455387424411 Q7Z2K8 GPRIN1 Q7Z2K8.T877.p_GPRIN1 Q7Z2K8_T877t _1_1_877_877 Q7Z2K8 Q7Z2K8 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22075.22075.3 19.67 19.67 3.903 3 1 1 0 802.0688 2324.227 T877t TMT10 870 (R) SVATGPMtPQAAAPPAFPEVR (V) S(0.0)VAT(0.0)GPMT(0.99)PQAAAPPAFPEVR t:Phosphorylated T GPRIN1 103196.3 2 24 292.1 381.4 HUMAN 1 1.1631 -1.8419 SVDCLKESPNKQQER-p B2RTY4-5;S994-p SVDCLKESPNKQQER 0.237173441215513 0.00295034438929059 0.319 -0.966666666666667 11.9737782465256 38.1584785670516 0.319 -0.966666666666667 0.0634778451189324 0.000152810129333019 2.32768444108665 -9.33314060914494 B2RTY4 MYO9A B2RTY4.5.S994.p_MYO9A B2RTY4-5_S994s _1_1_994_994 B2RTY4-5 B2RTY4-5|H3BMM1 Isoform 5 of Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8968.8968.4 10.34 5.62 2.219 3 1 1 0 701.108 2721.4445 S994s TMT10 985 (R) ESSVDCLKEsPNKQQER (A) ES(0.0)S(0.0)VDCLKES(0.99)PNKQQER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MYO9A 267577.4 1 4 457.1 306.95 HUMAN 1 11.9738 -38.1585 SVDETDKSPCEAGRV-p Q53SF7;S371-p SVDETDKSPCEAGRV 0.172012241579796 0.0148077240954323 0.296666666666667 -0.544 15.220979219928 25.3349200014327 0.296666666666667 -0.544 0.0300539858782532 0.00292757479782769 2.91999968128492 -5.1225993371403 Q53SF7 COBLL1 Q53SF7.S371.p_COBLL1 Q53SF7_S371s _1_1_371_371 Q53SF7 A0A0D9SG04|Q53SF7|Q53SF7-2|Q53SF7-3|Q53SF7-4|A0A0B4J1Z0 Cordon-bleu protein-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9273.9273.3 14.87 14.87 2.267 4 1 1 0 769.6847 2227.0735 S371s TMT10 362 (K) SMSVDETDKsPCEAGR (V) S(0.0)MS(0.0)VDET(0.0)DKS(0.99)PCEAGR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S COBLL1 132526.1 1 11 163.1 494.83 HUMAN 1 15.221 -25.3349 SVDGSPVSPSTNRTH-p P35568;S348-p SVDGSPVSPSTNRTH 0.0431670381948327 0.00816768591511242 0.521 0.466 30.3519460112228 29.7263615250247 0.521 0.466 0.000922158128746844 0.00106503491997713 6.53992269752632 6.33937073637366 P35568 IRS1 P35568.S348.p_IRS1 P35568_S348s _1_1_348_348 P35568 P35568 Insulin receptor substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8891.8891.3 16.95 14.1 1.262 9 1 1 0 953.4324 2778.3162 S348s TMT10 328 (R) ASSDGEGTMSRPASVDGSPVsPSTNR (T) AS(0.0)S(0.0)DGEGT(0.0)MS(0.0)RPAS(0.0)VDGS(0.0)PVS(0.99)PS(0.0)T(0.0)NR s:Phosphorylated S IRS1 132786.8 3 5 229.1 423.14 HUMAN 1 30.3519 29.7264 SVDKRHCSLQAVPEE-p A0A0G2JPP5;S23-p SVDKRHCSLQAVPEE 0.500902815636366 0.0225462096755242 0.135 0.368666666666667 5.534828945566 22.4943852910808 0.135 0.368666666666667 0.279587084564745 0.00563068809616801 1.20122836524123 4.43108545826255 A0A0G2JPP5 SCRIB A0A0G2JPP5.S23.p_SCRIB A0A0G2JPP5_S23s _1_1_23_23 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15487.15487.3 11.68 11.68 11.677 2 1 1 0 637.6403 1830.937 S23s TMT10 21 (R) HCsLQAVPEEIYR (Y) HCS(0.99)LQAVPEEIY(0.0)R C:Carbamidomethylation,s:Phosphorylated S SCRIB 178690.9 2 5 22.1 1004.81 HUMAN 1 5.5348 22.4944 SVDSRTISEPDEQRS-p O95049-3;S365-p SVDSRTISEPDEQRS 0.840652400719553 0.071613978754124 -0.0363333333333333 0.243333333333333 1.45678833863624 15.2194540102264 -0.0363333333333333 0.243333333333333 0.715024900357905 0.0300645424666454 -0.3848352983735 2.91777395580728 O95049 TJP3 O95049.3.S365.p_TJP3 O95049-3_S365s _1_1_365_365 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.6796.6796.3 15.54 12.63 1.246 3 1 1 0 579.6003 1656.8188 S365s Hydrogen 363 (R) TIsEPDEQRSELPR (E) T(0.0)IS(0.99)EPDEQRS(0.0)ELPR s:Phosphorylated S TJP3 103593.6 5 7 125.1 544.41 HUMAN 1 -1.4568 15.2195 SVEADKSSPGIHLER-p Q14676;S505-p SVEADKSSPGIHLER 0.260789944862731 0.0102221069934532 -0.302333333333333 0.607 11.0600285843781 27.9518404712635 -0.302333333333333 0.607 0.0783424486408863 0.00160256610461909 -2.16662918715648 5.82396211037241 Q14676 MDC1 Q14676.S505.p_MDC1 Q14676_S505s _1_1_505_505 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8902.8902.3 10.69 10.69 1.169 2 1 1 0 435.5576 1224.6898 S505s TMT10 504 (K) SsPGIHLER (S) S(0.0)S(0.99)PGIHLER s:Phosphorylated S MDC1 227803.2 1 16 6.1 1662.62 HUMAN 1 -11.06 27.9518 SVEDEMDSPGEEPFY-p Q12857-2;S287-p SVEDEMDSPGEEPFY 0.778227318172308 0.310215503270493 0.0483333333333333 0.100333333333333 2.09196129754952 6.71614576639432 0.0483333333333333 0.100333333333333 0.617737363575855 0.213002854403423 0.529072569078211 1.41085463123265 Q12857 NFIA Q12857.2.S287.p_NFIA Q12857-2_S287s _1_1_287_287 Q12857-2 Q12857-4|B1AKN8|Q12857-3|Q12857-2|B1AKN5|B1AKN7 Isoform 2 of Nuclear factor 1 A-type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18564.18564.3 25.4 25.4 9.313 4 1 1 0 847.0237 2459.087 S287s TMT10 280 (K) SVEDEMDsPGEEPFYTGQGR (S) S(0.0)VEDEMDS(0.99)PGEEPFY(0.0)T(0.0)GQGR s:Phosphorylated S NFIA 55018.3 5 8 555.1 273.2 HUMAN 1 2.092 6.7161 SVEGQAASDEEEVEE-p Q9HA90;S394-p SVEGQAASDEEEVEE 0.45060350179761 0.0474245919623707 0.146666666666667 0.33 6.3959411472086 17.7143557355854 0.146666666666667 0.33 0.22930096650046 0.0169263932439392 1.35480386085478 3.40195583359901 Q9HA90 EFCC1 Q9HA90.S394.p_EFCC1 Q9HA90_S394s _1_1_394_394 Q9HA90 Q9HA90 EF-hand and coiled-coil domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15644.15644.4 19 19 8.063 2 1 1 0 783.6063 3051.4431 S394s TMT10 387 (R) SVEGQAAsDEEEVEEERWQEEK (K) S(0.0)VEGQAAS(0.99)DEEEVEEERWQEEK K:TMT10,s:Phosphorylated S EFCC1 66384.9 2 1 4963.1 24.63 HUMAN 1 6.3959 17.7144 SVELPAPSPMPQLPP-p Q8N5L8;S16-p SVELPAPSPMPQLPP 0.40723792230155 0.278845732633224 0.212666666666667 0.184 7.20638083218998 7.30654967441972 0.212666666666667 0.184 0.190266319275002 0.185928100555559 1.49709292886991 1.51413672898302 Q8N5L8 RPP25L Q8N5L8.S16.p_RPP25L Q8N5L8_S16s _1_1_16_16 Q8N5L8 Q8N5L8 Ribonuclease P protein subunit p25-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28933.28933.4 17.28 16.23 10.443 3 1 1 0 686.3398 2662.3782 S16s TMT10 7 (K) AGSVELPAPsPMPQLPPDTLEMR (V) AGS(0.0)VELPAPS(0.99)PMPQLPPDT(0.0)LEMR s:Phosphorylated S RPP25L 17802.1 2 1 3742.1 44.09 HUMAN 1 7.2064 7.3065 SVFEICPSPAENNIQ-p Q6N021;S334-p SVFEICPSPAENNIQ 0.934823846454108 0.892592553165077 0.016 -0.0163333333333333 0.57607471276479 0.692808252155733 0.016 -0.0163333333333333 0.875774970001156 0.852548657359511 0.163877192165765 -0.194923669326624 Q6N021 TET2 Q6N021.S334.p_TET2 Q6N021_S334s _1_1_334_334 Q6N021 E7EQS8|Q6N021|Q6N021-3|E7EPB1|Q6N021-2 Methylcytosine dioxygenase TET2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23373.23373.4 16.88 16.88 5.841 4 1 1 0 658.3282 2550.3274 S334s TMT10 327 (K) SVFEICPsPAENNIQGTTK (L) S(0.0)VFEICPS(0.99)PAENNIQGT(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TET2 226374.6 2 6 594.1 264.06 HUMAN 1 0.5761 -0.6928 SVFLDDDSNQPMPVS-p Q8IYL3;S189-p SVFLDDDSNQPMPVS 0.133350942447308 0.0140130410445387 0.395 0.473666666666667 18.0184544540669 25.7139266505559 0.395 0.473666666666667 0.0157817280218361 0.00268291760297457 3.46600107286057 5.22013556837008 Q8IYL3 C1orf174 Q8IYL3.S189.p_C1orf174 Q8IYL3_S189s _1_1_189_189 Q8IYL3 Q8IYL3 UPF0688 protein C1orf174 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25241.25241.4 24.78 20.13 1.593 4 1 1 0 1152.551 4527.2172 S189s TMT10 162 (K) QNEPGLQTEDVQKPPLQMDNSVFLDDDsNQPMPVSR (F) Q(0.0)N(0.0)EPGLQT(0.0)EDVQKPPLQM(0.0)DN(0.0)S(0.0)VFLDDDS(0.99)N(0.0)QPM(0.0)PVS(0.0)R K:TMT10,s:Phosphorylated S C1orf174 26318.8 11 3 2485.1 81.6 HUMAN 1 18.0185 25.7139 SVFNYHLSPRTFPRY-p P41162;S315-p SVFNYHLSPRTFPRY 0.375876087847812 0.0087641603005346 -0.124666666666667 -0.599666666666667 7.85798535614494 29.1701583111177 -0.124666666666667 -0.599666666666667 0.163757599857132 0.00121055400504815 -1.61051484533082 -6.17413046421485 P41162 ETV3 P41162.S315.p_ETV3 P41162_S315s _1_1_315_315 P41162 P41162 ETS translocation variant 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14055.14055.4 15.33 15.33 2.402 5 1 1 0 632.0489 2445.2083 S315s TMT10 300 (K) HYLHSQACSVFNYHLsPR (T) HY(0.0)LHS(0.0)QACS(0.0)VFNY(0.0)HLS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S ETV3 57285.5 1 5 2187.1 94.05 HUMAN 1 -7.858 -29.1702 SVFTETPSPVLKNAI-p Q9UKI2;S100-p SVFTETPSPVLKNAI 0.373380145180951 0.0257729799287224 -0.191666666666667 -0.293666666666667 7.9281806082766 21.6072703120409 -0.191666666666667 -0.293666666666667 0.161132052499652 0.00690673779312351 -1.62269934309424 -4.2283264401094 Q9UKI2 CDC42EP3 Q9UKI2.S100.p_CDC42EP3 Q9UKI2_S100s _1_1_100_100 Q9UKI2 Q9UKI2 Cdc42 effector protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21630.21630.3 12.35 12.35 1.913 7 1 1 0 806.7479 2338.2542 S100s TMT10 87 (R) ANSTSDSVFTETPsPVLK (N) ANS(0.0)T(0.0)S(0.0)DS(0.0)VFT(0.0)ET(0.0)PS(0.99)PVLK K:TMT10,s:Phosphorylated S CDC42EP3 27791.7 1 2 3719.1 44.61 HUMAN 1 -7.9282 -21.6073 SVGAPDLSLEASEGS-p Q09666;S5393-p SVGAPDLSLEASEGS 0.171158122502722 0.268353223732572 -0.292666666666667 -0.116666666666667 15.2834030633203 7.52302955795134 -0.292666666666667 -0.116666666666667 0.0296250910420536 0.17688745936442 -2.93177459338337 -1.55182990860459 Q09666 AHNAK Q09666.S5393.p_AHNAK Q09666_S5393s _1_1_5393_5393 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26272.26601.4 20.97 20.97 1.583 4 1 1 0 716.9036 2784.6326 S5393s TMT10 5385 (K) VSVGAPDLsLEASEGSIKLPK (M) VS(0.0)VGAPDLS(0.99)LEAS(0.0)EGS(0.0)IKLPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 135 1.1 4313.36 HUMAN 1 -15.2834 -7.523 SVGDRAGSLPNYATI-p Q9HBL0;S1400-p SVGDRAGSLPNYATI 0.913226544765155 0.154395245209893 0.0166666666666667 -0.186333333333333 0.768916275813533 10.6700329093623 0.0166666666666667 -0.186333333333333 0.837738302511265 0.0857031350912973 0.214864863723643 -2.09748423893565 Q9HBL0 TNS1 Q9HBL0.S1400.p_TNS1 Q9HBL0_S1400s _1_1_1400_1400 Q9HBL0 Q9HBL0|E9PF55|E9PGF5|A0A087WWW7|H0Y4U1 Tensin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18878.18878.3 13.06 13.06 4.878 3 1 1 0 615.3285 1764.0056 S1400s TMT10 1398 (R) AGsLPNYATINGK (V) AGS(0.99)LPNY(0.0)AT(0.0)INGK K:TMT10,s:Phosphorylated S TNS1 186610.9 1 41 183.2 477.16 HUMAN 1 0.7689 -10.67 SVGGDSDTEDMRSKT-p Q9UK61;T701-p SVGGDSDTEDMRSKT 0.522286712615586 0.770355421543745 0.142 0.0443333333333334 5.21650719242872 1.56565325665453 0.142 0.0443333333333334 0.300849490793008 0.697324098963669 1.14359024147762 0.41026544265202 Q9UK61 FAM208A Q9UK61.T701.p_FAM208A Q9UK61_T701t_1_1_701_701 Q9UK61 Q9UK61|Q9UK61-4|Q9UK61-3|Q9UK61-2|A0A087X0F1 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5431.5431.3 9.94 2.63 1.134 3 1 1 0 770.053 2212.1847 T701t M704m TMT10 692 (R) KKSVGGDSDtEDmR (S) KKS(0.0)VGGDS(0.0)DT(0.99)EDM(1.0)R K:TMT10,t:Phosphorylated T,m:Oxidized methionine FAM208A 190568.5 1 8 246.1 411.17 HUMAN 1 5.2165 1.5657 SVGGFRYSERYDPEP-p Q14677-3;S173-p SVGGFRYSERYDPEP 0.0613809554565416 0.0523386211808003 -0.417666666666667 -0.379 26.4378695110376 17.0955694277882 -0.417666666666667 -0.379 0.00227097863724636 0.0195183480128658 -5.41740758054319 -3.27896566174248 Q14677 CLINT1 Q14677.3.S173.p_CLINT1 Q14677-3_S173s _1_1_173_173 Q14677-3 Q14677-3|Q14677-2 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17573.17573.4 15.92 11.86 1.631 7 1 1 0 783.884 3052.5416 S173s TMT10 159 (K) YVGVSSDSVGGFRYsERYDPEPK (S) Y(0.0)VGVS(0.0)S(0.0)DS(0.0)VGGFRY(0.0)S(0.99)ERY(0.0)DPEPK K:TMT10,s:Phosphorylated S CLINT1 70350.7 2 12 632.1 256.73 HUMAN 1 -26.4379 -17.0956 SVGGIRASLYNAVTI-p Q9Y617;S344-p SVGGIRASLYNAVTI 0.744503481010559 0.109333006519697 -0.0446666666666667 -0.275333333333333 2.43058559551261 12.69840749688 -0.0446666666666667 -0.275333333333333 0.571401584630462 0.053722875526938 -0.602179430982331 -2.455550876857 Q9Y617 PSAT1 Q9Y617.S344.p_PSAT1 Q9Y617_S344s _1_1_344_344 Q9Y617 Q9Y617|Q9Y617-2 Phosphoserine aminotransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24287.24287.3 18.37 16.53 4.127 3 1 1 0 697.0395 2009.1319 S344s TMT10 343 (R) AsLYNAVTIEDVQK (L) AS(0.99)LY(0.0)NAVT(0.0)IEDVQK K:TMT10,s:Phosphorylated S PSAT1 40821.3 2 3 3767.1 43.58 HUMAN 1 -2.4306 -12.6984 SVGGMSMSPNQGLQM-p Q9Y6Q9;S404-p SVGGMSMSPNQGLQM 0.982842045127411 0.0232145832694817 -0.00566666666666667 0.328333333333333 0.147689571858351 22.3071422290121 -0.00566666666666668 0.328333333333333 0.966564950671656 0.00587876063068777 -0.0438916297657065 4.38779680917196 Q9Y6Q9 NCOA3 Q9Y6Q9.S404.p_NCOA3 Q9Y6Q9_S404s_1_1_404_404 Q9Y6Q9 Q9Y6Q9|Q9Y6Q9-5|Q9Y6Q9-3|Q9Y6Q9-2|Q9Y6Q9-4 Nuclear receptor coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19347.19347.5 19.9 19.9 1.854 7 1 1 0 991.2559 4871.2854 S404s N406n TMT10 372 (R) EQNGYRPNPNPVGQGIRPPMAGCNSSVGGMSMsPnQGLQMPSSR (A) EQN(0.0)GY(0.0)RPN(0.0)PN(0.0)PVGQGIRPPMAGCN(0.0)S(0.0)S(0.0)VGGMS(0.0)MS(0.99)PN(0.99)QGLQMPS(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated NCOA3 156203.6 3 3 503.1 290.6 HUMAN 1 -0.1477 22.3071 SVGKAMDTPKPAGGD-p P46013;T2268-p SVGKAMDTPKPAGGD 0.233397292175924 0.0308507797340226 0.256333333333333 -0.583333333333333 12.1374847282056 20.4192730038326 0.256333333333333 -0.583333333333333 0.0611295962242712 0.00907972509380364 2.35674451131459 -3.9657036582453 P46013 MKI67 P46013.T2268.p_MKI67 P46013_T2268t _1_1_2268_2268 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8638.8638.3 14.08 14.08 99 1 1 1 0 695.3623 2004.1039 T2268t TMT10 2265 (K) AMDtPKPAGGDEK (D) AMDT(1.0)PKPAGGDEK K:TMT10,t:Phosphorylated T MKI67 360912.4 1 76 5.1 1918.46 HUMAN 1 12.1375 -20.4193 SVGNKSMSFPTGKSD-p Q01780;S868-p SVGNKSMSFPTGKSD 0.738993942982216 0.0420750304416847 0.0666666666666667 0.412666666666667 2.49152454922045 18.439579548802 0.0666666666666666 0.412666666666667 0.563439830944705 0.0143232655962787 0.615097868376035 3.54878532023593 Q01780 EXOSC10 Q01780.S868.p_EXOSC10 Q01780_S868s _1_1_868_868 Q01780 Q01780|Q01780-2 Exosome component 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17241.17241.2 11.93 11.93 2.512 3 1 1 0 696.8547 1312.7335 S868s TMT10 866 (K) SMsFPTGK (S) S(0.0)MS(0.99)FPT(0.0)GK K:TMT10,s:Phosphorylated S EXOSC10 101628.1 2 3 4135.1 36.87 HUMAN 1 2.4915 18.4396 SVGRCAASPYLRPLT-p O95848;S15-p SVGRCAASPYLRPLT 0.876177453261279 0.35009355225705 -0.0316666666666667 0.144333333333333 1.1258624420424 6.04331356238586 -0.0316666666666667 0.144333333333333 0.771638264878031 0.248695910427968 -0.305158396554315 1.29196644912492 O95848 NUDT14 O95848.S15.p_NUDT14 O95848_S15s _1_1_15_15 O95848 O95848|F8VU44 Uridine diphosphate glucose pyrophosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18197.18197.4 16.71 16.71 6.433 4 1 1 0 532.5242 2047.1109 S15s TMT10 12 (R) CAAsPYLRPLTLHYR (Q) CAAS(0.99)PY(0.0)LRPLT(0.0)LHY(0.0)R C:Carbamidomethylation,s:Phosphorylated S NUDT14 24346 2 1 5735.1 16.71 HUMAN 1 -1.1259 6.0433 SVHERYSSPTAGSAK-p P28749;S650-p SVHERYSSPTAGSAK 0.0147380963983692 0.000952253650599092 -1.03166666666667 -2.20966666666667 43.6109017379244 56.2301380950925 -1.03166666666667 -2.20966666666667 4.35421456509741e-05 2.38224371859263e-06 -11.9119494172058 -20.5247195284521 P28749 RBL1 P28749.S650.p_RBL1 P28749_S650s _1_1_650_650 P28749 P28749|P28749-2 Retinoblastoma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7682.7682.2 12.47 4.39 1.107 5 1 1 0 753.8842 1426.7942 S650s TMT10 648 (R) YSsPTAGSAK (R) Y(0.0)S(0.0)S(0.99)PT(0.0)AGS(0.0)AK K:TMT10,s:Phosphorylated S RBL1 122214.1 4 6 566.1 270.71 HUMAN 1 -43.6109 -56.2301 SVHKTPRSPLSGIPV-p Q5M775;S847-p SVHKTPRSPLSGIPV 0.359109030275756 0.00854565817657389 -0.124666666666667 -0.528666666666667 8.26520089543262 29.3482477112323 -0.124666666666667 -0.528666666666667 0.149100778299413 0.00116191732898172 -1.68113732190797 -6.22666300030075 Q5M775 SPECC1 Q5M775.S847.p_SPECC1 Q5M775_S847s _1_1_847_847 Q5M775 Q5M775|Q5M775-4 Cytospin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.14774.14774.2 11.54 11.54 2.158 3 1 1 0 794.9433 1508.911 S847s TMT10 844 (K) TPRsPLSGIPVR (T) T(0.0)PRS(0.99)PLS(0.0)GIPVR s:Phosphorylated S SPECC1 119267.5 7 19 330.1 358.68 HUMAN 1 -8.2652 -29.3482 SVIIADQTPTPTRFL-p P17544-6;T51-p SVIIADQTPTPTRFL 0.812705167874657 0.543180709793805 0.0556666666666667 -0.103 1.73294347766226 3.56470021581466 0.0556666666666667 -0.103 0.670973938962607 0.440078324452361 0.448813194758416 -0.832819899265565 P17544 ATF7 P17544.6.T51.p_ATF7 P17544-6_T51tT53t_2_2_51_53 P17544-6 P17544|P17544-6|P17544-3|K7ELQ4|P17544-2|P17544-4 Isoform 6 of Cyclic AMP-dependent transcription factor ATF-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16751.16751.2 14.01 14.01 1.829 5 2 2 0 1002.4691 1843.9963 T51t T53t TMT10 42 (R) TDSVIIADQtPtPTR (F) T(0.0)DS(0.0)VIIADQT(0.99)PT(0.99)PT(0.0)R t:Phosphorylated T ATF7 52155.3 6 9 758.1 230.62 HUMAN 1 1.7329 -3.5647 SVIVADQTPTPTRFL-p P15336;T69-p SVIVADQTPTPTRFL 0.838230425758004 0.458030074713222 0.0663333333333333 0.126 1.4842995358729 4.52060042549783 0.0663333333333333 0.126 0.710509757335853 0.353134344506103 0.391305276978877 1.01523493227951 P15336 ATF2 P15336.T69.p_ATF2 P15336_T69tT71t_2_2_69_71 P15336 P15336 Cyclic AMP-dependent transcription factor ATF-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24576.24619.4 11.68 11.68 1.717 4 2 2 0 787.9041 2988.6671 T69t T71t TMT10 55 (K) FGPARNDSVIVADQtPtPTRFLK (N) FGPARNDS(0.0)VIVADQT(0.99)PT(0.99)PT(0.0)RFLK K:TMT10,t:Phosphorylated T ATF2 54821.7 6 6 1174.1 169.92 HUMAN 1 1.4843 4.5206 SVKEIKHSPGPTRTV-p Q96CV9;S198-p SVKEIKHSPGPTRTV 0.505331441375725 0.599902338336779 -0.111333333333333 0.073 5.47295869877356 3.00757425459589 -0.111333333333333 0.0730000000000001 0.283598631034158 0.500313906540807 -1.19006764448679 0.721848834462549 Q96CV9 OPTN Q96CV9.S198.p_OPTN Q96CV9_S198s _1_1_198_198 Q96CV9 Q96CV9|Q96CV9-2|Q96CV9-3 Optineurin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4171.4171.4 14.26 14.26 5.568 2 1 1 0 415.7299 1579.932 S198s TMT10 194 (K) EIKHsPGPTR (T) EIKHS(0.99)PGPT(0.0)R K:TMT10,s:Phosphorylated S OPTN 66319.4 7 5 2419.1 84.3 HUMAN 1 -5.473 3.0076 SVKLEMQSDEECDRK-p B4DWF2;S62-p SVKLEMQSDEECDRK 0.873357500298762 0.180813778428007 0.0233333333333333 0.257666666666667 1.15027343832047 9.76973053764181 0.0233333333333333 0.257666666666667 0.767313176652299 0.105445231891117 0.311159481182394 1.94096649902998 B4DWF2 IKZF2 B4DWF2.S62.p_IKZF2 B4DWF2_S62s _1_1_62_62 B4DWF2 B4DWF2|Q9UKS7|Q9UKS7-2|Q9UKS7-7|Q9UKS7-4|A0A0A0MT14|A0A0A0MSL2|Q9UKS7-6|Q9UKS7-3 Zinc finger protein Helios HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11282.11282.4 12.05 12.05 12.046 2 1 1 0 633.5552 2451.2372 S62s TMT10 58 (K) LEMQsDEECDRKPLSR (E) LEMQS(0.99)DEECDRKPLS(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S IKZF2 61457.9 1 1 2223.2 92.84 HUMAN 1 1.1503 9.7697 SVKQRIKSFENLANA-p O15018;S2341-p SVKQRIKSFENLANA 0.560423836734948 0.0206638190916108 0.25 -0.833333333333333 4.63737184499476 23.0547977844582 0.25 -0.833333333333333 0.343765916648613 0.00494903153989846 1.0371647287948 -4.56226808347112 O15018 PDZD2 O15018.S2341.p_PDZD2 O15018_S2341s _1_1_2341_2341 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19137.19137.4 15.09 15.09 99 1 1 1 0 635.8611 2460.4542 S2341s TMT10 2339 (R) IKsFENLANADRPVAK (S) IKS(1.0)FENLANADRPVAK K:TMT10,s:Phosphorylated S PDZD2 304146 3 31 85.1 628.64 HUMAN 1 4.6374 -23.0548 SVKRARVSGDDFSVP-p Q15361;S403-p SVKRARVSGDDFSVP 0.560833838683985 0.0278525049398698 0.171333333333333 -0.317 4.62810504826538 21.0753383742892 0.171333333333333 -0.317 0.344500213326106 0.00780667613175843 1.03544315434874 -4.10951281905323 Q15361 TTF1 Q15361.S403.p_TTF1 Q15361_S403s _1_1_403_403 Q15361 Q15361 Transcription termination factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14666.14666.2 9.56 7.07 2.146 3 1 1 0 723.8403 1366.7052 S403s Hydrogen 402 (R) VsGDDFSVPSK (N) VS(0.99)GDDFS(0.0)VPS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S TTF1 103505.6 1 3 1295.1 156.82 HUMAN 1 4.6281 -21.0753 SVKTPKISMPDVDLH-p Q09666;S698-p SVKTPKISMPDVDLH 0.182164595842396 0.112113203542378 -0.298 0.178 14.5531834507482 12.5422012493366 -0.298 0.178 0.0350494861206982 0.0556903407333565 -2.79506284052593 2.4276156860835 Q09666 AHNAK Q09666.S698.p_AHNAK Q09666_S698s _1_1_698_698 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23023.23023.3 17.21 12.16 99 1 1 1 0 597.9874 1711.9817 S698s TMT10 697 (K) IsMPDVDLHVK (G) IS(1.0)MPDVDLHVK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 36 1.1 4313.36 HUMAN 1 -14.5532 12.5422 SVKVKEPSVQEATST-p A9Z1X7;S234-p SVKVKEPSVQEATST 0.135150528241429 0.0311646019213268 -0.662 0.673666666666667 17.8299835879698 20.3496025273003 -0.662 0.673666666666667 0.0164816861995878 0.00922655866113108 -3.42793866048636 3.95060427370492 A9Z1X7 NotFound A9Z1X7.S234.p_NotFound A9Z1X7_S234s _1_1_234_234 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18345.18345.4 15.05 10.48 3.724 5 1 1 0 650.6108 2519.4535 S234s TMT10 230 (K) VKEPsVQEATSTSDILK (V) VKEPS(0.99)VQEAT(0.0)S(0.0)T(0.0)S(0.0)DILK K:TMT10,s:Phosphorylated S SRRM1 103445.7 2 3 8.1 1346.57 HUMAN 1 -17.83 20.3496 SVLDILKSPGFASPK-p P49790-3;S645-p SVLDILKSPGFASPK 0.0511487796737011 0.0013882827676627 -0.811333333333333 -0.938333333333333 28.2837379052325 46.3025287076229 -0.811333333333334 -0.937457985077337 0.00148465727074758 2.34286427027342e-05 -5.92647234139838 -13.3648408396867 P49790 NUP153 P49790.3.S645.p_NUP153 P49790-3_S645s _1_1_645_645 P49790-3 P49790-3 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28421.28421.3 20.07 15.68 2.591 3 1 1 0 838.1411 2432.4368 S645s TMT10 636 (K) EGSVLDILKsPGFASPK (I) EGS(0.0)VLDILKS(0.99)PGFAS(0.0)PK K:TMT10,s:Phosphorylated S NUP153 158989.2 4 26 64.1 696.53 HUMAN 1 -28.2837 -46.3025 SVLDSRVSVDSNLFV-p Q8TDJ6-3;S1140-p SVLDSRVSVDSNLFV 0.497103888080226 0.019429497948105 0.111666666666667 0.325 5.59121819036517 23.5065197113952 0.111666666666667 0.325 0.275980362631757 0.00446013525327783 1.21138368239709 4.6698197074486 Q8TDJ6 DMXL2 Q8TDJ6.3.S1140.p_DMXL2 Q8TDJ6-3_S1140sS1143s_2_2_1140_1143 Q8TDJ6-3 Q8TDJ6-3 Isoform 3 of DmX-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30238.30665.4 12.18 12.18 2.279 6 2 2 0 698.1038 2629.4601 S1140s S1143s TMT10 1131 (K) VGSVLDSRVsVDsNLFVYSK (S) VGS(0.0)VLDS(0.0)RVS(0.99)VDS(0.99)NLFVY(0.0)S(0.0)K K:TMT10,s:Phosphorylated S DMXL2 343259.8 7 8 1366.1 149.7 HUMAN 1 5.5912 23.5065 SVLFRRGTGQSDDSD-p Q16637;T25-p SVLFRRGTGQSDDSD 0.975009344981545 0.74354775437885 -0.00533333333333335 0.0326666666666667 0.214569420879393 1.7755326711817 -0.00533333333333335 0.0326666666666667 0.951794208602255 0.664426174662742 -0.0633078132265442 0.458446541117206 Q16637 SMN1 Q16637.T25.p_SMN1 Q16637_T25tS28sS31s_3_3_25_31 Q16637 Q16637|E7EQZ4|Q16637-3|A0A1W2PRV5 Survival motor neuron protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29727.29727.3 8.91 8.91 4.725 4 3 3 0 931.0783 2551.304 T25t S28s S31s TMT10 23 (R) RGtGQsDDsDIWDDTALIK (A) RGT(0.99)GQS(0.99)DDS(0.99)DIWDDT(0.0)ALIK K:TMT10,t:Phosphorylated T,s:Phosphorylated S SMN1 32304.6 2 8 1780.1 115.32 HUMAN 1 -0.2146 1.7755 SVLGLTPSPRQKSMK-p O14715;S21-p SVLGLTPSPRQKSMK 0.840753327633277 0.213386115125789 -0.042 -0.246333333333333 1.45470483953463 8.82542034614631 -0.042 -0.246333333333333 0.715368011128714 0.13105631890742 -0.384344399858366 -1.77751691518553 O14715 RGPD8 O14715.S21.p_RGPD8 O14715_S21s _1_1_21_21 O14715 Q99666|O14715|Q99666-2|F8W705 RANBP2-like and GRIP domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26457.26457.2 16.54 16.54 1.217 4 1 1 0 834.9485 1588.926 S21s TMT10 11 (R) YVASVLGLTPsPR (Q) Y(0.0)VAS(0.0)VLGLT(0.0)PS(0.99)PR s:Phosphorylated S RGPD8 200301.5 2 2 9.2 1298.62 HUMAN 1 -1.4547 -8.8254 SVLMKRDSDSEGD__-p Q9H2J4;S234-p SVLMKRDSDSEGD__ 0.886027178849554 0.389589144955323 0.0253333333333333 -0.118 1.02985847361851 5.44418820155813 0.0253333333333333 -0.118 0.788885825137701 0.285483609986821 0.281351432198851 -1.18461324246985 Q9H2J4 PDCL3 Q9H2J4.S234.p_PDCL3 Q9H2J4_S234sS236s_2_2_234_236 Q9H2J4 Q9H2J4 Phosducin-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13729.13940.3 7.86 7.86 7.858 3 2 2 0 686.3069 1896.9737 S234s S236s TMT10 227 (R) SVLMKRDsDsEGD (-) S(0.0)VLMKRDS(0.99)DS(0.99)EGD K:TMT10,s:Phosphorylated S PDCL3 27728 6 2 6320.1 12.42 HUMAN 1 1.0299 -5.4442 SVLNKGESQYNQRLE-p Q5T655;S643-p SVLNKGESQYNQRLE 0.0506176118125653 0.0578574176233614 0.715 0.484333333333333 28.5338645432002 16.4882096751497 0.715 0.484333333333333 0.00140156597448987 0.0224480712681593 5.99815755024524 3.16018407909718 Q5T655 CFAP58 Q5T655.S643.p_CFAP58 Q5T655_S643s_1_1_643_643 Q5T655 Q5T655 Cilia- and flagella-associated protein 58 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17083.17083.3 7.29 7.29 7.292 3 1 1 0 1026.1727 2994.5831 N639n S643s N646n TMT10 633 (K) IQQSVLnKGEsQYnQRLEDMR (I) IQQS(0.0)VLN(1.0)KGES(0.99)QY(0.0)N(1.0)QRLEDMR K:TMT10,n:Deamidated,s:Phosphorylated S CFAP58 103586.6 1 1 6435.1 11.71 HUMAN 1 28.5339 16.4882 SVLQNKFSPPSPLPQ-p Q99594;S145-p SVLQNKFSPPSPLPQ 0.302581797188097 0.299805555233336 0.209666666666667 0.112333333333333 9.72795207426309 6.90617391596322 0.209666666666667 0.112333333333333 0.106464493567205 0.203883747890796 1.93448279604263 1.44418560570699 Q99594 TEAD3 Q99594.S145.p_TEAD3 Q99594_S145s _1_1_145_145 Q99594 Q99594|A0A1X7SBS4|B5MCM0 Transcriptional enhancer factor TEF-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.28402.28402.3 10.87 10.87 1.302 6 1 1 0 705.355 2034.0858 S145s TMT10 144 (K) FsPPSPLPQAVFSTSSR (F) FS(0.99)PPS(0.0)PLPQAVFS(0.0)T(0.0)S(0.0)S(0.0)R s:Phosphorylated S TEAD3 48846.7 3 8 3010.1 63.35 HUMAN 1 9.728 6.9062 SVLSKSDSQASLTVP-p Q8TEV9;S489-p SVLSKSDSQASLTVP 0.276230295661083 0.0841326459821268 -0.197333333333333 0.198666666666667 10.5676645144631 14.2315238881938 -0.197333333333333 0.198666666666667 0.0877472568690373 0.0377439728531078 -2.08052930196443 2.73385360584198 Q8TEV9 SMCR8 Q8TEV9.S489.p_SMCR8 Q8TEV9_S489s _1_1_489_489 Q8TEV9 Q8TEV9|Q8TEV9-2 Guanine nucleotide exchange protein SMCR8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22416.22416.2 18.33 18.33 2.732 5 1 1 0 1047.0464 2013.1178 S489s TMT10 487 (K) SDsQASLTVPLSPQVVR (S) S(0.0)DS(0.99)QAS(0.0)LT(0.0)VPLS(0.0)PQVVR s:Phosphorylated S SMCR8 105933.1 2 4 2079.1 98.78 HUMAN 1 -10.5677 14.2315 SVLSLEGSEKGLARH-p A1L390;S647-p SVLSLEGSEKGLARH 0.420399434619342 0.406973781435761 -0.136666666666667 -0.113666666666667 6.9420752830244 5.19628377291217 -0.136666666666667 -0.113666666666667 0.202205270670979 0.302253697761147 -1.45086994024207 -1.13967140952934 A1L390 PLEKHG3 A1L390.S647.p_PLEKHG3 A1L390_S647s _1_1_647_647 A1L390 A1L390|A1L390-3|A1L390-2 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17497.17497.2 16.53 16.53 3.857 5 1 1 0 880.9575 1680.942 S647s TMT10 638 (R) SSSVLSLEGsEK (G) S(0.0)S(0.0)S(0.0)VLS(0.0)LEGS(0.99)EK K:TMT10,s:Phosphorylated S PLEKHG3 135322.7 2 10 284.1 386.18 HUMAN 1 -6.9421 -5.1963 SVNGALRSPNMDISS-p Q6RI45;S685-p SVNGALRSPNMDISS 0.737842628723044 0.0442362330576431 -0.055 -0.259 2.50327621409341 18.1342714644811 -0.055 -0.259 0.561917268262698 0.0153664254580776 -0.617581256442626 -3.48660909115375 Q6RI45 BRWD3 Q6RI45.S685.p_BRWD3 Q6RI45_S685s _1_1_685_685 Q6RI45 Q6RI45|Q6RI45-2|Q6RI45-4|Q6RI45-3|Q6RI45-5 Bromodomain and WD repeat-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17841.17841.3 11.7 11.7 2.2 6 1 1 0 886.7682 2578.3245 S685s TMT10 676 (R) AYSVNGALRsPNMDISSSPNIR (L) AY(0.0)S(0.0)VNGALRS(0.99)PNMDIS(0.0)S(0.0)S(0.0)PNIR s:Phosphorylated S BRWD3 205362.6 1 1 1905.1 108.09 HUMAN 1 -2.5033 -18.1343 SVPEFPLSPPKKKDL-p P16949;S38-p SVPEFPLSPPKKKDL 0.111684031420699 0.00404124447761282 -0.294333333333333 -1.06066666666667 19.8821698340558 35.2597760876285 -0.294333333333333 -1.06066666666667 0.0102750280607814 0.000297866999893051 -3.85370825723378 -8.19033954720293 P16949 STMN1 P16949.S38.p_STMN1 P16949_S38s _1_1_38_38 P16949 P16949-2 Stathmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21693.21693.3 21.58 21.58 14.68 3 1 1 0 770.4315 2229.3098 S38s TMT10 28 (R) SKESVPEFPLsPPK (K) S(0.0)KES(0.0)VPEFPLS(0.99)PPK K:TMT10,s:Phosphorylated S STMN1 17302.2 30 6 690.1 243.18 HUMAN 1 -19.8822 -35.2598 SVPGEPASPISQRLP-p Q14980;S1757-p SVPGEPASPISQRLP 0.979213683234262 0.178742216526909 0.00399999999999999 0.153 0.179722884121635 9.83592031139299 0.004 0.153 0.959461851181889 0.103850351031344 0.0532256951450962 1.95244281723091 Q14980 NUMA1 Q14980.S1757.p_NUMA1 Q14980_S1757s _1_1_1757_1757 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30595.30595.5 25.82 22.61 1.78 9 1 1 0 920.8826 4520.4441 S1757s TMT10 1744 (R) TQPDGTSVPGEPAsPISQRLPPKVESLESLYFTPIPAR (S) T(0.0)QPDGT(0.0)S(0.0)VPGEPAS(0.99)PIS(0.0)QRLPPKVES(0.0)LES(0.0)LY(0.0)FT(0.0)PIPAR K:TMT10,s:Phosphorylated S NUMA1 239339.3 27 18 31.1 900.97 HUMAN 1 0.1797 9.8359 SVPLHVLSRLAINSD-p O95685;S133-p SVPLHVLSRLAINSD 0.161635164088614 0.104909279132893 0.245333333333333 0.434333333333333 15.8420656989235 12.9359586919863 0.245333333333333 0.434333333333333 0.0260491424149135 0.0508632528152731 3.0379236349333 2.4981708194238 O95685 PPP1R3D O95685.S133.p_PPP1R3D O95685_S133s _1_1_133_133 O95685 O95685 Protein phosphatase 1 regulatory subunit 3D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23948.23948.3 13.74 13.74 1.733 2 1 1 0 711.3629 2052.1076 S133s TMT10 118 (K) VFNAGDDPSVPLHVLsR (L) VFNAGDDPS(0.0)VPLHVLS(0.99)R s:Phosphorylated S PPP1R3D 33300.2 1 6 2020.1 102.1 HUMAN 1 15.8421 12.936 SVPNLRGSEERLLAL-p Q9H019;S110-p SVPNLRGSEERLLAL 0.114394108260794 0.523598444072665 0.302333333333333 0.0823333333333334 19.6215875548499 3.77532282384567 0.302333333333333 0.0823333333333334 0.0109104143551543 0.419244831826463 3.79820550827775 0.873789132175086 Q9H019 MTFR1L Q9H019.S110.p_MTFR1L Q9H019_S110s _1_1_110_110 Q9H019 Q9H019|Q9H019-3|Q9H019-2|E9PLD2|E9PRK5 Mitochondrial fission regulator 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7886.7886.3 8.08 8.08 3.134 2 1 1 0 579.9538 1657.8819 S110s TMT10 101 (R) NASVPNLRGsEER (L) NAS(0.0)VPNLRGS(0.99)EER s:Phosphorylated S MTFR1L 32413.3 1 3 1618.1 127.17 HUMAN 1 19.6216 3.7753 SVPNPRISDAELEAE-p Q8WUX9;S417-p SVPNPRISDAELEAE 0.0446455739616341 0.117356489069572 -0.482 -0.236333333333333 29.9942273952905 12.2670175761597 -0.482 -0.236333333333333 0.00100133007512154 0.0593332643122136 -6.43036742911448 -2.37856954465723 Q8WUX9 CHMP7 Q8WUX9.S417.p_CHMP7 Q8WUX9_S417s _1_1_417_417 Q8WUX9 Q8WUX9 Charged multivesicular body protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25502.25502.2 17.3 17.3 99 1 1 1 0 942.9851 1804.9944 S417s TMT10 416 (R) IsDAELEAELEK (L) IS(1.0)DAELEAELEK K:TMT10,s:Phosphorylated S CHMP7 51195.3 9 2 1632.1 125.1 HUMAN 1 -29.9942 -12.267 SVQARRLSQPESAEK-p Q9UKV3;S710-p SVQARRLSQPESAEK 0.195954837597201 0.0204287703952853 -0.225333333333333 0.347 13.7986370334034 23.1309744132518 -0.225333333333333 0.347 0.0417000232061549 0.00486298084235849 -2.65602181318008 4.58029040099929 Q9UKV3 ACIN1 Q9UKV3.S710.p_ACIN1 Q9UKV3_S710s _1_1_710_710 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7045.7045.2 12.64 12.64 3.484 2 1 1 0 841.9478 1602.9215 S710s TMT10 708 (R) RLsQPESAEK (H) RLS(0.99)QPES(0.0)AEK K:TMT10,s:Phosphorylated S ACIN1 152258.2 9 25 32.2 899.18 HUMAN 1 -13.7986 23.131 SVQCATPSPPTSPAS-p Q5VTI5;S1037-p SVQCATPSPPTSPAS 0.549625433380482 0.0519385433649919 0.0846666666666667 0.232666666666667 4.79924540715969 17.1419998375973 0.0846666666666667 0.232666666666667 0.331188660984636 0.0193107888977002 1.06713701928548 3.2881236874559 Q5VTI5 NotFound Q5VTI5.S1037.p_NotFound Q5VTI5_S1037s _1_1_1037_1037 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23435.23435.3 23.78 19.23 1.166 9 1 1 0 1147.553 3360.6765 S1037s TMT10 1028 (R) MLSVQCATPsPPTSPASPAPPANPLSSESPR (G) MLS(0.0)VQCAT(0.0)PS(0.99)PPT(0.0)S(0.0)PAS(0.0)PAPPANPLS(0.0)S(0.0)ES(0.0)PR C:Carbamidomethylation,s:Phosphorylated S PLEKHA6 119745.7 6 35 52.1 743.36 HUMAN 1 4.7992 17.142 SVQGSTPSPRQKSMK-p P49792;S21-p SVQGSTPSPRQKSMK 0.608202691544958 0.820259663171498 0.0763333333333333 -0.0276666666666667 3.99847230670224 1.20411805242488 0.0763333333333333 -0.0276666666666667 0.398247235109498 0.757858620086996 0.916837581267531 -0.32429078071899 P49792 RANBP2 P49792.S21.p_RANBP2 P49792_S21s _1_1_21_21 P49792 P49792|F8WBP7 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12640.12640.2 15.13 15.13 1.144 5 1 1 0 836.4186 1591.8641 S21s TMT10 11 (R) YIASVQGSTPsPR (Q) Y(0.0)IAS(0.0)VQGS(0.0)T(0.0)PS(0.99)PR s:Phosphorylated S RANBP2 362585.9 3 4 9.1 1298.62 HUMAN 1 3.9985 -1.2041 SVQRPGPYDRPGTAR-p P52597;Y210-p SVQRPGPYDRPGTAR 0.962849921197336 0.0344601781214137 0.00933333333333333 -0.284 0.317725755759679 19.7067935199796 0.00933333333333333 -0.284 0.929452980510883 0.0106984447453388 0.0927320473059612 -3.81280452692131 P52597 HNRNPF P52597.Y210.p_HNRNPF P52597_Y210y _1_1_210_210 P52597 P52597 Heterogeneous nuclear ribonucleoprotein F GG20160819_MSz_CCLE_T4D7_pY_Injection_02.12126.12167.3 11.79 7.39 7.393 3 1 1 0 748.703 2164.1283 Y210y TMT10 201 (K) FMSVQRPGPyDRPGTAR (R) FMS(0.0)VQRPGPY(0.99)DRPGT(0.0)AR y:Phosphorylated Y HNRNPF 46013.4 3 1 301.1 11.79 HUMAN 1 0.3177 -19.7068 SVRAGLQSLEASGRL-p O60784-2;S355-p SVRAGLQSLEASGRL 0.10246774842247 0.192262484375394 0.309333333333333 0.156 20.9328158992715 9.41444373836555 0.309333333333333 0.156 0.00806711800995814 0.1144341442231 4.08206445938945 1.87942227123175 O60784 TOM1 O60784.2.S355.p_TOM1 O60784-2_S355s _1_1_355_355 O60784-2 O60784-2 Isoform 2 of Target of Myb protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12898.12898.2 14.45 14.45 2.269 2 1 1 0 699.3535 1317.7324 S355s TMT10 351 (R) AGLQsLEASGR (L) AGLQS(0.99)LEAS(0.0)GR s:Phosphorylated S TOM1 54158.9 1 5 1385.1 148 HUMAN 1 20.9328 9.4144 SVRKKAGSFSRRLIK-p O14523;S681-p SVRKKAGSFSRRLIK 0.015464429325557 0.00259997565261951 -0.941666666666667 -0.697666666666667 42.6717673113279 39.4287393062172 -0.941666666666667 -0.697666666666667 5.40534313975862e-05 0.000114058083355452 -11.4296550557156 -9.87735885386663 O14523 C2CD2L O14523.S681.p_C2CD2L O14523_S681s _1_1_681_681 O14523 O14523-2 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6133.6133.2 8.67 5.76 8.669 2 1 1 0 645.8528 1210.7308 S681s TMT10 678 (K) KAGsFSR (R) KAGS(0.99)FS(0.0)R K:TMT10,s:Phosphorylated S C2CD2L 76636.4 3 16 411.1 322.51 HUMAN 1 -42.6718 -39.4287 SVRKRGRSTDEYSEA-p Q96T23;S1277-p SVRKRGRSTDEYSEA 0.221798193479614 0.0263581786161247 -0.229 0.301 12.5856669250626 21.4470764257158 -0.229 0.301 0.0551357526567582 0.00716625664401941 -2.436667443471 4.19233179984008 Q96T23 RSF1 Q96T23.S1277.p_RSF1 Q96T23_S1277sT1278tS1282s_3_3_1277_1282 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8533.8533.5 19.96 19.96 1.491 5 3 3 0 697.6885 3244.513 S1277s T1278t S1282s Hydrogen 1275 (R) GRstDEYsEADEEEEEEEGKPSRK (R) GRS(0.99)T(0.99)DEY(0.0)S(0.99)EADEEEEEEEGKPS(0.0)RK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T RSF1 165358.1 12 33 39.1 857.38 HUMAN 1 -12.5857 21.4471 SVRMKRPSPPPQPSS-p Q8IX03-2;S974-p SVRMKRPSPPPQPSS 0.464183338913858 0.0533763971173213 -0.0983333333333333 -0.246333333333333 6.1504157813188 16.9721801118074 -0.0983333333333334 -0.246333333333333 0.242637778937911 0.0200808452262093 -1.31131495641152 -3.2546824817882 Q8IX03 WWC1 Q8IX03.2.S974.p_WWC1 Q8IX03-2_S974s _1_1_974_974 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7878.7878.3 13.46 13.46 3.485 3 1 1 0 605.6688 1735.0267 S974s TMT10 972 (K) RPsPPPQPSSVK (S) RPS(0.99)PPPQPS(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S WWC1 126701.1 1 20 312.1 370.85 HUMAN 1 -6.1504 -16.9722 SVRRSWDSLNEDVET-p Q8IY42;S241-p SVRRSWDSLNEDVET 0.992676088698794 0.300447362379528 0.00166666666666666 0.113 0.0680364149112157 6.8936986496359 0.00166666666666666 0.113 0.984456109435684 0.204470253318591 0.0203990519301853 1.44200025063459 Q8IY42 C4orf19 Q8IY42.S241.p_C4orf19 Q8IY42_S241s _1_1_241_241 Q8IY42 Q8IY42 Uncharacterized protein C4orf19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.36772.36772.4 22.67 22.67 2.429 4 1 1 0 763.8602 2972.4599 S241s TMT10 238 (R) SWDsLNEDVETEVLSICFNEK (G) S(0.0)WDS(0.99)LNEDVET(0.0)EVLS(0.0)ICFNEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C4orf19 34254.4 6 7 703.1 239.48 HUMAN 1 0.068 6.8937 SVRSPTGSPSRLKSP-p Q86UU0;S991-p SVRSPTGSPSRLKSP 0.0428370985731628 0.0268350939531822 -0.536333333333333 -0.382333333333333 30.4892617266439 21.3308126562788 -0.536333333333333 -0.382333333333333 0.000893457352965778 0.00736069350557343 -6.5823747358559 -4.1663237799785 Q86UU0 BCL9L Q86UU0.S991.p_BCL9L Q86UU0_S991s _1_1_991_991 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7711.7711.3 11.08 7.33 2.174 4 1 1 0 523.2924 1487.8946 S991s TMT10 987 (R) SPTGsPSRLK (S) S(0.0)PT(0.0)GS(0.99)PS(0.0)RLK K:TMT10,s:Phosphorylated S BCL9L 157526.3 2 19 139.1 524.37 HUMAN 1 -30.4893 -21.3308 SVRTAHLSDDD____-p Q2T9K0;S472-p SVRTAHLSDDD____ 0.33738946325448 0.0460752661538343 0.166333333333333 0.290666666666667 8.78930341281256 17.8830900393387 0.166333333333333 0.290666666666667 0.132150758056525 0.0162813718803199 1.77189102453551 3.43585368451978 Q2T9K0 TMEM44 Q2T9K0.S472.p_TMEM44 Q2T9K0_S472s _1_1_472_472 Q2T9K0 Q2T9K0 Transmembrane protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6410.6410.2 11.15 11.15 11.152 2 1 1 0 591.7478 1102.5214 S472s TMT10 468 (R) TAHLsDDD (-) T(0.0)AHLS(0.99)DDD s:Phosphorylated S TMEM44 53112.8 1 2 4218.1 35.21 HUMAN 1 8.7893 17.8831 SVSGSPESDELQELR-p Q7Z2Z1;S841-p SVSGSPESDELQELR 0.905794601053213 0.0319202802974035 0.0196666666666667 -0.323333333333333 0.843485004298986 20.200005174951 0.0196666666666667 -0.323333333333333 0.823477049093317 0.00954991448075382 0.234143967182707 -3.91829230594387 Q7Z2Z1 TICRR Q7Z2Z1.S841.p_TICRR Q7Z2Z1_S838sS841s_2_2_838_841 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18368.18368.2 12.05 12.05 2.39 4 2 2 0 1011.4393 1861.9341 S838s S841s TMT10 834 (R) SVSGsPEsDELQELR (T) S(0.0)VS(0.0)GS(0.99)PES(0.99)DELQELR s:Phosphorylated S TICRR 212850 2 27 238.1 417.32 HUMAN 1 0.8435 -20.2 SVSSGRKSPHSKSPA-p Q96II5;S272-p SVSSGRKSPHSKSPA 0.0960927279902167 0.186894023237866 1.042 -0.573333333333333 21.5829957407024 9.58138376306832 1.042 -0.573333333333333 0.00694545058750859 0.11011883894468 4.22721693482832 -1.90832946170569 Q96II5 ARAF Q96II5.S272.p_ARAF Q96II5_S272s _1_1_272_272 Q96II5 Q96II5|P10398 ARAF protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.2949.2949.4 14 14 14.003 3 1 1 0 473.2553 1810.0336 S272s Hydrogen 271 (R) KsPHSKSPAEQR (E) KS(0.99)PHS(0.0)KS(0.0)PAEQR K:TMT10-Lys-Only,s:Phosphorylated S ARAF 68723.3 2 37 441.2 311.96 HUMAN 1 21.583 -9.5814 SVSTEDLSPPSPPLP-p Q13127;S861-p SVSTEDLSPPSPPLP 0.840696231762748 0.148723690884194 -0.04 0.180333333333333 1.45560883684569 10.8949584719796 -0.04 0.180333333333333 0.71521912057524 0.0813774642201249 -0.384557408757686 2.13676417831341 Q13127 REST Q13127.S861.p_REST Q13127_S861sS864s_2_2_861_864 Q13127 Q13127|Q13127-4 RE1-silencing transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23281.23281.3 11.99 11.99 2.51 5 2 2 0 800.0576 2238.227 S861s S864s TMT10 853 (K) ESVSTEDLsPPsPPLPK (E) ES(0.0)VS(0.0)T(0.0)EDLS(0.99)PPS(0.99)PPLPK K:TMT10,s:Phosphorylated S REST 123239.4 3 59 240.5 415.72 HUMAN 1 -1.4556 10.895 SVSTHTRSGNLKRPK-p Q9Y6X4;S330-p SVSTHTRSGNLKRPK 0.386240879421881 0.572500692280055 -0.176666666666667 0.138333333333333 7.64672803065646 3.26503600455648 -0.176666666666667 0.138333333333333 0.171920314491989 0.471515962285292 -1.57381043403318 0.773634456323427 Q9Y6X4 FAM169A Q9Y6X4.S330.p_FAM169A Q9Y6X4_S330s _1_1_330_330 Q9Y6X4 Q9Y6X4|D6RB01 Soluble lamin-associated protein of 75 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5179.5179.3 10.13 10.13 10.127 6 1 1 0 642.6796 1846.0547 S330s TMT10 322 (K) TSVSTHTRsGNLK (R) T(0.0)S(0.0)VS(0.0)T(0.0)HT(0.0)RS(0.99)GNLK K:TMT10,s:Phosphorylated S FAM169A 75295.8 2 2 731.1 236 HUMAN 1 -7.6467 3.265 SVSTKVGTPMSLTGQ-p Q16594;T178-p SVSTKVGTPMSLTGQ 0.699538079396913 0.554586171858686 0.075 -0.0673333333333333 2.91676688785658 3.44976154421922 0.075 -0.0673333333333333 0.510885187728662 0.45188075487208 0.703455412884044 -0.810248933471697 Q16594 TAF9 Q16594.T178.p_TAF9 Q16594_T178t _1_1_178_178 Q16594 Q16594 Transcription initiation factor TFIID subunit 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15134.15134.2 11.63 4.06 1.489 3 1 1 0 728.3648 1375.7565 T178t TMT10 176 (K) VGtPMSLTGQR (F) VGT(0.99)PMS(0.0)LT(0.0)GQR t:Phosphorylated T TAF9 29087.5 1 4 2847.1 68.15 HUMAN 1 2.9168 -3.4498 SVTASSESPVEIQNP-p Q13625-3;S789-p SVTASSESPVEIQNP 0.0721955710812666 0.0952034749945835 -0.624333333333333 -0.242666666666667 24.5824140981322 13.507759858663 -0.624333333333334 -0.242666666666667 0.0034814373975009 0.0445886182358418 -4.93878666636407 -2.60148324420317 Q13625 TP53BP2 Q13625.3.S789.p_TP53BP2 Q13625-3_S789s _1_1_789_789 Q13625-3 Q13625-3|Q13625-2 Isoform 3 of Apoptosis-stimulating of p53 protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20263.20263.4 19.45 19.45 1.787 7 1 1 0 809.9109 3156.6465 S789s TMT10 780 (K) SASVTASSEsPVEIQNPYLHVEPEK (E) S(0.0)AS(0.0)VT(0.0)AS(0.0)S(0.0)ES(0.99)PVEIQNPY(0.0)LHVEPEK K:TMT10,s:Phosphorylated S TP53BP2 127005.7 2 10 834.1 215.28 HUMAN 1 -24.5824 -13.5078 SVTDKRDSEEESEST-p Q17R89;S809-p SVTDKRDSEEESEST 0.330617661956966 0.34360590418057 0.148333333333333 0.108 8.98337423900984 6.14660670105631 0.148333333333333 0.108 0.126375409567938 0.242850683370037 1.80548476906701 1.31031969247839 Q17R89 ARHGAP44 Q17R89.S809.p_ARHGAP44 Q17R89_S809s _1_1_809_809 Q17R89 Q17R89|Q17R89-3 Rho GTPase-activating protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7895.7895.3 9.65 9.65 2.357 6 1 1 0 853.4069 2478.236 S809s TMT10 801 (R) HSVTDKRDsEEESESTAL (-) HS(0.0)VT(0.0)DKRDS(0.99)EEES(0.0)ES(0.0)T(0.0)AL K:TMT10,s:Phosphorylated S ARHGAP44 89872.8 1 2 4672.1 28.14 HUMAN 1 8.9834 6.1466 SVTEVLGSPRIVTVA-p Q02446;S757-p SVTEVLGSPRIVTVA 0.473135474382633 0.0372848983160666 0.0993333333333333 0.261 5.98766435048247 19.1990103189551 0.0993333333333333 0.261 0.25190313065691 0.012025384408403 1.2823657655879 3.70582710056078 Q02446 SP4 Q02446.S757.p_SP4 Q02446_S757s _1_1_757_757 Q02446 Q02446 Transcription factor Sp4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29520.29520.4 19.73 17.92 3.185 7 1 1 0 785.6747 3059.6989 S757s TMT10 733 (K) KGGGTALAIVTSGELDSSVTEVLGsPR (I) KGGGT(0.0)ALAIVT(0.0)S(0.0)GELDS(0.0)S(0.0)VT(0.0)EVLGS(0.99)PR K:TMT10,s:Phosphorylated S SP4 82611.1 3 5 1474.1 139.4 HUMAN 1 5.9877 19.199 SVTKLEKSIDDLEDE-p P09493-4;S252-p SVTKLEKSIDDLEDE 0.400967119654592 0.321293187451003 -0.189333333333333 0.131333333333333 7.32592992976652 6.51991844196051 -0.189333333333333 0.131333333333333 0.185100250726034 0.222847699841093 -1.51795350942699 1.37633258967873 P09493 TPM1 P09493.4.S252.p_TPM1 P09493-4_S252s _1_1_252_252 P09493-4 P09493|P09493-4|P09493-6 Isoform 4 of Tropomyosin alpha-1 chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26437.26437.3 18.96 18.96 14.126 2 1 1 0 693.0089 1997.0479 S252s TMT10 252 (K) sIDDLEDELYAQK (L) S(0.99)IDDLEDELY(0.0)AQK K:TMT10,s:Phosphorylated S TPM1 32847.3 1 6 2271.2 90.46 HUMAN 1 -7.3259 6.5199 SVTKLEKSIDDLEEK-p P09493-3;S252-p SVTKLEKSIDDLEEK 0.860558395251919 0.397034763654805 0.03 -0.0816666666666666 1.27403705512817 5.33345421578969 0.03 -0.0816666666666666 0.745755207203581 0.292856304923957 0.341272284626648 -1.16458051519893 P09493 TPM1 P09493.3.S252.p_TPM1 P09493-3_S252s _1_1_252_252 P09493-3 P09493-3|P09493-7|P09493-8|P09493-9|H7BYY1|P09493-2 Isoform 3 of Tropomyosin alpha-1 chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16279.16279.2 13.16 13.16 99 1 1 1 0 743.8758 1406.7779 S252s TMT10 252 (K) sIDDLEEK (V) S(1.0)IDDLEEK K:TMT10,s:Phosphorylated S TPM1 32875.4 4 3 2271.1 90.46 HUMAN 1 1.274 -5.3335 SVTPKTVTPASSAKT-p A0A1C7CYX9;T619-p SVTPKTVTPASSAKT 0.217055986564022 0.0435063216539677 0.286333333333333 -0.381 12.7832617039238 18.2415299425177 0.286333333333333 -0.381 0.05268340419557 0.0149915661615071 2.47208420940048 -3.50839131211152 A0A1C7CYX9 NotFound A0A1C7CYX9.T619.p_NotFound A0A1C7CYX9_T619t _1_1_619_619 A0A1C7CYX9 A0A1C7CYX9|Q16555|Q16555-2 Dihydropyrimidinase-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7702.7702.2 11.36 7.39 1.787 4 1 1 0 700.3835 1319.7935 T619t TMT10 617 (K) TVtPASSAK (T) T(0.0)VT(0.99)PAS(0.0)S(0.0)AK K:TMT10,t:Phosphorylated T DPYSL2 74072.2 4 3 2882.1 67.24 HUMAN 1 12.7833 -18.2415 SVTPQRRSCFESSPD-p Q9UQ35;S871-p SVTPQRRSCFESSPD 0.125793466600753 0.0391240661714543 0.311333333333333 0.645 18.7035459642525 18.8973106770868 0.311333333333333 0.645 0.0134786191951123 0.0128904753372759 3.60607553297802 3.64302394726321 Q9UQ35 SRRM2 Q9UQ35.S871.p_SRRM2 Q9UQ35_S871s _1_1_871_871 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14017.14017.2 14.23 13.38 4.353 3 1 1 0 852.8712 1624.7726 S871s Hydrogen 871 (R) sCFESSPDPELK (S) S(0.99)CFES(0.0)S(0.0)PDPELK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 2 32 2.1 3310.34 HUMAN 1 18.7035 18.8973 SVTQGGHSRTSSPTP-p P40425;S330-p SVTQGGHSRTSSPTP 0.0796409010099057 0.0219612633801806 0.393333333333333 0.486666666666667 23.4611484222058 22.6631672982791 0.393333333333333 0.486666666666667 0.00450697509044074 0.00541605754675393 4.66429659262456 4.47033676931583 P40425 PBX2 P40425.S330.p_PBX2 P40425_S330s _1_1_330_330 P40425 P40425 Pre-B-cell leukemia transcription factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4644.4644.2 13.67 13.67 2.206 4 1 1 0 754.8749 1428.7757 S330s TMT10 320 (K) TAVSVTQGGHsR (T) T(0.0)AVS(0.0)VT(0.0)QGGHS(0.99)R s:Phosphorylated S PBX2 46165.8 1 3 2165.1 94.72 HUMAN 1 23.4611 22.6632 SVTSPKASPVTSPAA-p F8VU39;S494-p SVTSPKASPVTSPAA 0.770398746656441 0.401977953907494 -0.0443333333333333 -0.107333333333333 2.1696962046662 5.26468695434044 -0.0443333333333333 -0.107333333333333 0.606778773165493 0.297530371528892 -0.546062940533368 -1.15210622756367 F8VU39 BAZ2A F8VU39.S494.p_BAZ2A F8VU39_S494s _1_1_494_494 F8VU39 F8VU39|Q9UIF9-3|Q9UIF9-2|J3KPG5 Bromodomain adjacent to zinc finger domain protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19678.19678.3 11.3 11.3 2.504 5 1 1 0 775.078 2243.2436 S494s TMT10 493 (K) AsPVTSPAAAFPTASPANK (D) AS(0.99)PVT(0.0)S(0.0)PAAAFPT(0.0)AS(0.0)PANK K:TMT10,s:Phosphorylated S BAZ2A 212873.4 1 4 471.1 302.34 HUMAN 1 -2.1697 -5.2647 SVVKLHQSPVPVTPK-p Q96AV8;S856-p SVVKLHQSPVPVTPK 0.317619523036944 0.000952253650599092 -0.218333333333333 -1.541 9.33020401592531 55.0072627062517 -0.218333333333333 -1.541 0.116675480582979 3.15699380283458e-06 -1.86553925079073 -19.4741798761433 Q96AV8 E2F7 Q96AV8.S856.p_E2F7 Q96AV8_S856s _1_1_856_856 Q96AV8 Q96AV8|Q96AV8-3 Transcription factor E2F7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11759.11759.3 12.98 12.98 5.215 2 1 1 0 580.9983 1661.015 S856s TMT10 853 (K) LHQsPVPVTPK (S) LHQS(0.99)PVPVT(0.0)PK K:TMT10,s:Phosphorylated S E2F7 100342.7 1 7 2042.1 101.08 HUMAN 1 -9.3302 -55.0073 SVVKQEASSDEEASP-p F5GX28;S666-p SVVKQEASSDEEASP 0.14685232684758 0.00840448513471 0.27 0.443333333333333 16.9159528793945 29.4785954484426 0.27 0.443333333333333 0.0203425181456223 0.00112756206200142 3.24609927239106 6.26533596606926 F5GX28 KDM4B F5GX28.S666.p_KDM4B F5GX28_S666sS667s_2_2_666_667 F5GX28 F5GX28|O94953|A0A0C4DFL8 Lysine-specific demethylase 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.35664.35863.4 13.87 10.91 2.677 8 2 2 0 1298.4031 5030.6089 S666s S667s TMT10 656 (R) SPLSVVKQEAssDEEASPFSGEEDVSDPDALRPLLSLQWK (N) S(0.0)PLS(0.0)VVKQEAS(0.99)S(0.99)DEEAS(0.0)PFS(0.0)GEEDVS(0.0)DPDALRPLLS(0.0)LQWK K:TMT10,s:Phosphorylated S KDM4B 127963.8 3 8 1830.1 112.42 HUMAN 1 16.916 29.4786 SVVSGLDSPAKTSSM-p O14578-4;S440-p SVVSGLDSPAKTSSM 0.194002306690035 0.00264930192085164 0.501333333333333 -0.833333333333333 13.8939309648232 39.2053148828118 0.501333333333333 -0.833333333333334 0.0407949968111505 0.000120079400695311 2.67346462593707 -9.77960326259642 O14578 CIT O14578.4.S440.p_CIT O14578-4_S440s _1_1_440_440 O14578-4 O14578-4|O14578-2 Isoform 4 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16324.16324.4 18.83 18.83 3.469 7 1 1 0 677.3552 2626.4213 S440s TMT10 431 (R) SESVVSGLDsPAKTSSMEK (K) S(0.0)ES(0.0)VVS(0.0)GLDS(0.99)PAKT(0.0)S(0.0)S(0.0)MEK K:TMT10,s:Phosphorylated S CIT 238656.7 11 7 366.1 342.11 HUMAN 1 13.8939 -39.2053 SVVVRRRSPRPSPVP-p Q9Y2W1;S264-p SVVVRRRSPRPSPVP 0.338386511533049 0.00165353599935713 -0.380666666666667 1.02133333333333 8.7530214045872 44.2752221338997 -0.380666666666667 1.02133333333333 0.133259401845405 3.7366101279742e-05 -1.76561060420938 12.2321681759309 Q9Y2W1 THRAP3 Q9Y2W1.S264.p_THRAP3 Q9Y2W1_S264s _1_1_264_264 Q9Y2W1 Q9Y2W1 Thyroid hormone receptor-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5276.5276.2 13.59 7.62 11.423 2 1 1 0 637.3469 1193.7204 S264s Hydrogen 264 (R) sPRPSPVPK (P) S(0.99)PRPS(0.0)PVPK K:TMT10-Lys-Only,s:Phosphorylated S THRAP3 108720.9 21 63 10.2 1293.04 HUMAN 1 -8.753 44.2752 SVYEPLKSINLPRPD-p Q93100-2;S27-p SVYEPLKSINLPRPD 0.065794259854515 0.52006101930439 -0.835333333333333 0.103 25.5485413158555 3.81531373936588 -0.835333333333333 0.103 0.00278705711267877 0.415402041033119 -5.18406052386288 0.881513546899902 Q93100 PHKB Q93100.2.S27.p_PHKB Q93100-2_S27s _1_1_27_27 Q93100-2 Q93100|Q93100-3|Q93100-2|Q93100-4 Isoform 2 of Phosphorylase b kinase regulatory subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23213.23213.3 13.4 13.4 13.404 2 1 1 0 779.3993 2256.2389 S27s TMT10 27 (K) sINLPRPDNETLWDK (L) S(0.99)INLPRPDNET(0.0)LWDK K:TMT10,s:Phosphorylated S PHKB 125160.1 2 5 1018.1 188.04 HUMAN 1 -25.5485 3.8153 SVYKASLSLIEKYFS-p P52292;S490-p SVYKASLSLIEKYFS 0.146674740935683 0.00278908336687029 -0.337 -0.718 16.9426625106662 38.6309009523178 -0.337 -0.718 0.0202177931503236 0.000137059740358299 -3.251350202363 -9.53229130505595 P52292 KPNA2 P52292.S490.p_KPNA2 P52292_S490s _1_1_490_490 P52292 P52292 Importin subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22082.22082.2 12 4.84 2.587 2 1 1 0 699.9035 1318.8346 S490s TMT10 487 (K) ASLsLIEK (Y) AS(0.0)LS(0.99)LIEK K:TMT10,s:Phosphorylated S KPNA2 58203.2 2 7 1475.1 139.39 HUMAN 1 -16.9427 -38.6309 SVYNYHLSPRAFLHY-p P50548;S327-p SVYNYHLSPRAFLHY 0.181080338359562 0.143662943094981 -0.368666666666667 0.291333333333333 14.6275416303897 11.1001588112747 -0.368666666666667 0.291333333333333 0.0344544908844313 0.0776218731616854 -2.8088837991685 2.17267582747231 P50548 ERF P50548.S327.p_ERF P50548_S327s _1_1_327_327 P50548 P50548|P50548-2 ETS domain-containing transcription factor ERF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11206.11206.4 21.7 21.7 4.143 6 1 1 0 636.3207 2462.289 S327s TMT10 312 (K) RYLQAHTQSVYNYHLsPR (A) RY(0.0)LQAHT(0.0)QS(0.0)VY(0.0)NY(0.0)HLS(0.99)PR s:Phosphorylated S ERF 59044.2 1 5 1246.1 162.15 HUMAN 1 -14.6275 11.1002 SVYYNEATGGKYVPR-p P07437;T55-p SVYYNEATGGKYVPR 0.385983551793518 0.0131621887982114 -0.177 0.396 7.65324672042903 26.1923994698946 -0.177 0.396 0.171662458454108 0.00240303476040423 -1.57494385664961 5.3451636458868 P07437 TUBB P07437.T55.p_TUBB P07437_T55t _1_1_55_55 P07437 P07437|Q5JP53 Tubulin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17705.17705.2 17.92 13.49 9.274 4 1 1 0 920.4691 1759.9631 T55t TMT10 47 (R) ISVYYNEAtGGK (Y) IS(0.0)VY(0.0)Y(0.0)NEAT(0.99)GGK K:TMT10,t:Phosphorylated T TUBB 50126.4 4 5 333.1 357.15 HUMAN 1 -7.6532 26.1924 SWAPQPKSPKSPFQP-p Q9BY89;S1757-p SWAPQPKSPKSPFQP 0.405156836123993 0.129569147656071 -0.138 -0.269333333333333 7.24491929269681 11.6971141173254 -0.138 -0.269333333333333 0.188585401501456 0.0676532381180217 -1.50382060313257 -2.27762059354274 Q9BY89 KIAA1671 Q9BY89.S1757.p_KIAA1671 Q9BY89_S1757s _1_1_1757_1757 Q9BY89 Q9BY89|A0A1B0GVJ7|Q9BY89-2 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19085.19085.5 17.82 16.55 2 6 1 1 0 837.4479 4103.2281 S1757s TMT10 1739 (K) RPEVDSPGETPSWAPQPKsPKSPFQPGVLGSR (V) RPEVDS(0.0)PGET(0.0)PS(0.0)WAPQPKS(0.99)PKS(0.0)PFQPGVLGS(0.0)R K:TMT10,s:Phosphorylated S KIAA1671 197734.4 3 26 105.1 590.35 HUMAN 1 -7.2449 -11.6971 SWGSGRSSPLLGGNG-p Q9C075;S65-p SWGSGRSSPLLGGNG 0.792858799068625 0.0211656247596102 -0.0623333333333333 0.474666666666667 1.94416753399235 22.9003240395897 -0.0623333333333333 0.474666666666667 0.639121233888163 0.00512823119357653 -0.496401729983944 4.52586302369552 Q9C075 KRT23 Q9C075.S65.p_KRT23 Q9C075_S65s _1_1_65_65 Q9C075 Q9C075 Keratin, type I cytoskeletal 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13261.13261.2 11.47 11.47 1.394 2 1 1 0 734.4036 1387.8309 S65s TMT10 64 (R) SsPLLGGNGK (A) S(0.0)S(0.99)PLLGGNGK K:TMT10,s:Phosphorylated S KRT23 48301.4 4 8 2033.1 101.49 HUMAN 1 -1.9442 22.9003 SWKIDSLSLNGEFGY-p Q8TEQ0;S330-p SWKIDSLSLNGEFGY 0.871554253693342 0.0149985430633291 0.0416666666666667 0.447333333333333 1.16892793227122 25.2389801153915 0.0416666666666667 0.447333333333333 0.764024361790847 0.00299296741390248 0.31573146355839 5.09811632628302 Q8TEQ0 SNX29 Q8TEQ0.S330.p_SNX29 Q8TEQ0_S330s _1_1_330_330 Q8TEQ0 Q8TEQ0|Q8TEQ0-2 Sorting nexin-29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25849.25849.2 15.86 15.86 2.543 3 1 1 0 1055.0378 2029.1006 S330s TMT10 326 (K) IDSLsLNGEFGYQK (L) IDS(0.0)LS(0.99)LNGEFGY(0.0)QK K:TMT10,s:Phosphorylated S SNX29 91651.5 4 3 764.1 229.17 HUMAN 1 1.1689 25.239 SWKSPPASPESWKSG-p Q96JM3;S386-p SWKSPPASPESWKSG 0.0596422750038118 0.0114133320159853 -0.442666666666667 -0.509333333333333 26.7657230732562 27.1912316702996 -0.442666666666667 -0.509333333333333 0.00210585125868705 0.00190931169607715 -5.50533504419672 -5.61320700103412 Q96JM3 CHAMP1 Q96JM3.S386.p_CHAMP1 Q96JM3_S386s _1_1_386_386 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14941.15147.2 12.16 7.88 1.802 3 1 1 0 812.4117 1543.8521 S386s TMT10 382 (K) SPPAsPESWK (S) S(0.0)PPAS(0.99)PES(0.0)WK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 4 18 25.1 950.05 HUMAN 1 -26.7657 -27.1912 SWKSSSVSPSSWKSP-p Q96JM3;S376-p SWKSSSVSPSSWKSP 0.585616421770961 0.0351630390731131 0.077 -0.273333333333333 4.2728192672844 19.5739316105039 0.077 -0.273333333333333 0.373867809346732 0.0110307956441436 0.968933085981754 -3.78465671968742 Q96JM3 CHAMP1 Q96JM3.S376.p_CHAMP1 Q96JM3_S376s _1_1_376_376 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15282.15282.3 10.52 10.14 1.181 6 1 1 0 530.6044 1509.8313 S376s TMT10 372 (K) SSSVsPSSWK (S) S(0.0)S(0.0)S(0.0)VS(0.99)PS(0.0)S(0.0)WK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 3 16 25.1 950.05 HUMAN 1 4.2728 -19.5739 SWLSPRVSPPASPGP-p Q9Y4U1;S275-p SWLSPRVSPPASPGP 0.168210601929357 0.00634539661454908 -0.240666666666667 -0.501666666666667 15.4555871210695 31.641395626812 -0.240666666666667 -0.501666666666667 0.0284735284159811 0.000685267976809474 -2.96434167718114 -6.93569632689693 Q9Y4U1 MMACHC Q9Y4U1.S275.p_MMACHC Q9Y4U1_S275s _1_1_275_275 Q9Y4U1 Q9Y4U1|A0A0C4DGU2 Methylmalonic aciduria and homocystinuria type C protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22170.22373.2 16.38 14.51 1.939 4 1 1 0 922.4688 1763.9642 S275s TMT10 268 (R) SWLSPRVsPPASPGP (-) S(0.0)WLS(0.0)PRVS(0.99)PPAS(0.0)PGP s:Phosphorylated S MMACHC 32013.1 5 3 3383.1 52.31 HUMAN 1 -15.4556 -31.6414 SWRKASRSAAESALK-p Q9P2M7;S1157-p SWRKASRSAAESALK 0.114016248333261 0.0328235480414733 -0.349666666666667 0.506333333333333 19.6588580102782 20.0170351338023 -0.349666666666667 0.506333333333333 0.010817183548293 0.00996085198378723 -3.80611710895754 3.87897358266491 Q9P2M7 CGN Q9P2M7.S1157.p_CGN Q9P2M7_S1157s _1_1_1157_1157 Q9P2M7 Q9P2M7 Cingulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7226.7226.2 9.92 5.8 4.592 2 1 1 0 543.2745 1005.5778 S1157s Hydrogen 1157 (R) sAAESALK (N) S(0.99)AAES(0.0)ALK K:TMT10-Lys-Only,s:Phosphorylated S CGN 136611.7 1 17 239.1 416.31 HUMAN 1 -19.6589 20.017 SWRKLKNSQEAQQRQ-p Q9BV73;S45-p SWRKLKNSQEAQQRQ 0.0593125796096809 0.0143603080775264 0.442666666666667 -0.689666666666667 26.8181552801505 25.5499967112885 0.442666666666667 -0.689666666666667 0.00208058025178766 0.0027861232784314 5.5194941460159 -5.1777877488222 Q9BV73 CEP250 Q9BV73.S45.p_CEP250 Q9BV73_S45s _1_1_45_45 Q9BV73 Q9BV73|Q9BV73-2|E9PHT2 Centrosome-associated protein CEP250 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5208.5208.3 10.26 10.26 99 1 1 1 0 580.6453 1659.9542 S45s TMT10 42 (K) LKNsQEAQQR (Q) LKNS(1.0)QEAQQR K:TMT10,s:Phosphorylated S CEP250 282045.1 1 1 1169.1 170.36 HUMAN 1 26.8182 -25.55 SWRLLFGSGLPPALF-p Q969U7;S257-p SWRLLFGSGLPPALF 0.615123191884599 0.770335785211533 0.150666666666667 0.0553333333333333 3.91699598115702 1.56613820664795 0.150666666666667 0.0553333333333333 0.40578912309777 0.697246237408559 0.901229718616385 0.410378147308115 Q969U7 PSMG2 Q969U7.S257.p_PSMG2 Q969U7_S257s _1_1_257_257 Q969U7 Q969U7|Q969U7-2 Proteasome assembly chaperone 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.38192.38192.2 10.5 10.5 99 1 1 1 0 770.9216 1460.8715 S257s TMT10 253 (R) LLFGsGLPPALF (-) LLFGS(1.0)GLPPALF s:Phosphorylated S PSMG2 29794.9 1 1 6626.1 10.5 HUMAN 1 3.917 1.5661 SWRYEETSENEAVAE-p Q8IX03-2;S848-p SWRYEETSENEAVAE 0.512243036387966 0.0725017229000605 0.121 0.337666666666667 5.37041095542046 15.1452076845761 0.121 0.337666666666667 0.290374787146857 0.0305829399190567 1.17152550085898 2.90381222083925 Q8IX03 WWC1 Q8IX03.2.S848.p_WWC1 Q8IX03-2_S848s _1_1_848_848 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26687.26687.4 14.58 14.58 1.139 9 1 1 0 1374.3481 5414.3767 S848s TMT10 833 (R) SSTQTLEDSWRYEETsENEAVAEEEEEEVEEEEGEEDVFTEK (A) S(0.0)S(0.0)T(0.0)QT(0.0)LEDS(0.0)WRY(0.0)EET(0.0)S(0.99)ENEAVAEEEEEEVEEEEGEEDVFT(0.0)EK K:TMT10,s:Phosphorylated S WWC1 126701.1 3 13 312.1 370.85 HUMAN 1 5.3704 15.1452 SWSPPAGSPPRSPRR-p Q2NL68;S459-p SWSPPAGSPPRSPRR 0.458964628123898 0.602395509032517 0.100333333333333 0.0496666666666667 6.2376329125264 2.98501394035334 0.100333333333333 0.0496666666666667 0.237813611759604 0.502919651533619 1.32678757401632 0.717266431898535 Q2NL68 PROSER3 Q2NL68.S459.p_PROSER3 Q2NL68_S459s _1_1_459_459 Q2NL68 Q2NL68 Proline and serine-rich protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.34101.34101.5 24.25 24.25 2.471 5 1 1 0 618.7113 3009.5632 S459s TMT10 440 (R) LSFLLDQAEDLGSWSPPAGsPPRSPR (R) LS(0.0)FLLDQAEDLGS(0.0)WS(0.0)PPAGS(0.99)PPRS(0.0)PR s:Phosphorylated S PROSER3 51188 4 3 2513.1 80.39 HUMAN 1 6.2376 2.985 SWVVPGPSPNEENNG-p Q6W2J9;S515-p SWVVPGPSPNEENNG 0.512739424025493 0.223860333853112 -0.0883333333333333 -0.200666666666667 5.36125290199841 8.56175461129994 -0.0883333333333333 -0.200666666666667 0.290987752247993 0.139259406152413 -1.16986687155366 -1.73190909384187 Q6W2J9 BCOR Q6W2J9.S515.p_BCOR Q6W2J9_S515s _1_1_515_515 Q6W2J9 Q6W2J9|Q6W2J9-2|Q6W2J9-4|Q6W2J9-3 BCL-6 corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25810.25810.4 18.74 18.74 1.74 6 1 1 0 784.3905 3054.5784 S515s TMT10 499 (R) SEIISTAPSSWVVPGPsPNEENNGK (S) S(0.0)EIIS(0.0)T(0.0)APS(0.0)S(0.0)WVVPGPS(0.99)PNEENNGK K:TMT10,s:Phosphorylated S BCOR 193725.6 2 6 459.1 305.76 HUMAN 1 -5.3613 -8.5618 SYAGGRGSYGDLGGP-p P61978-2;S379-p SYAGGRGSYGDLGGP 0.622311572527884 0.114018924305338 0.0823333333333333 -0.172333333333333 3.82797793688929 12.4363755850577 0.0823333333333333 -0.172333333333333 0.414192476805239 0.0570640302840732 0.884101255163904 -2.40872967101151 P61978 HNRNPK P61978.2.S379.p_HNRNPK P61978-2_S379s _1_1_379_379 P61978-2 P61978-2|P61978-3 Isoform 2 of Heterogeneous nuclear ribonucleoprotein K HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28951.28951.3 19.13 13.94 3.27 5 1 1 0 819.1154 2375.3586 S379s TMT10 378 (R) GsYGDLGGPIITTQVTIPK (D) GS(0.99)Y(0.0)GDLGGPIIT(0.0)T(0.0)QVT(0.0)IPK K:TMT10,s:Phosphorylated S HNRNPK 51312.6 3 9 595.1 264.01 HUMAN 1 3.828 -12.4364 SYDEYADSDEDQHDA-p Q08945;S444-p SYDEYADSDEDQHDA 0.556613278508217 0.228396838852781 0.104666666666667 0.119 4.69843625948873 8.44682283942194 0.104666666666667 0.119 0.338966183878485 0.142993967443557 1.04849341950157 1.71202313185196 Q08945 SSRP1 Q08945.S444.p_SSRP1 Q08945_S444s _1_1_444_444 Q08945 Q08945 FACT complex subunit SSRP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14739.15048.3 30.84 30.84 1.683 5 1 1 0 1053.4198 3078.2744 S444s TMT10 432 (K) EGMNPSYDEYADsDEDQHDAYLER (M) EGMNPS(0.0)Y(0.0)DEY(0.0)ADS(0.99)DEDQHDAY(0.0)LER s:Phosphorylated S SSRP1 81415.7 23 3 1270.1 159.97 HUMAN 1 4.6984 8.4468 SYDIFEDSDDSEPGG-p Q9UMN6;S1092-p SYDIFEDSDDSEPGG 0.111927598528294 0.271337302044875 0.759666666666667 0.272333333333333 19.8667511296155 7.46047638613745 0.759666666666667 0.272333333333333 0.0103115722013 0.1794536769777 3.85041190602802 1.54094627324143 Q9UMN6 KMT2B Q9UMN6.S1092.p_KMT2B Q9UMN6_S1092s _1_1_1092_1092 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17562.17562.3 19.96 19.03 2.286 4 1 1 0 947.7584 2761.2903 S1092s TMT10 1082 (K) QRPSYDIFEDsDDSEPGGPPAPR (R) QRPS(0.0)Y(0.0)DIFEDS(0.99)DDS(0.0)EPGGPPAPR s:Phosphorylated S KMT2B 297845.7 1 13 388.1 332.76 HUMAN 1 19.8668 7.4605 SYDPYDFSDTEEEMP-p P25205-2;S756-p SYDPYDFSDTEEEMP 0.863089088408807 0.0473773781774267 0.0253333333333333 -0.249333333333333 1.2473863253608 17.7211784284648 0.0253333333333333 -0.249333333333333 0.750345647113795 0.0168998230424807 0.334831115360106 -3.40332342971707 P25205 MCM3 P25205.2.S756.p_MCM3 P25205-2_S756s_1_1_756_756 P25205-2 P25205-2|J3KQ69 Isoform 2 of DNA replication licensing factor MCM3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18695.18695.4 20.38 20.38 1.107 6 1 1 0 970.4196 3799.7322 Q741q S756s M762m Hydrogen 741 (R) qPDAKDGDSYDPYDFsDTEEEmPQVHTPK (T) Q(1.0)PDAKDGDS(0.0)Y(0.0)DPY(0.0)DFS(0.99)DT(0.0)EEEM(1.0)PQVHT(0.0)PK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S,m:Oxidized methionine MCM3 96534.2 18 6 136.1 528.96 HUMAN 1 1.2474 -17.7212 SYDVKNPSPLLMQNQ-p O43303;S551-p SYDVKNPSPLLMQNQ 0.245013623097441 0.00857793023874917 0.174 -0.511333333333333 11.6786469451362 29.3198815297465 0.174 -0.511333333333333 0.067941527310309 0.00116953129397626 2.27546178664436 -6.21827207215845 O43303 CCP110 O43303.S551.p_CCP110 O43303_S551s _1_1_551_551 O43303 O43303|O43303-2 Centriolar coiled-coil protein of 110 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16961.16961.3 12.75 9.31 3.998 4 1 1 0 881.7858 2563.3703 S551s TMT10 544 (K) SYDVKNPsPLLMQNQNTR (Q) S(0.0)Y(0.0)DVKNPS(0.99)PLLMQNQNT(0.0)R K:TMT10,s:Phosphorylated S CCP110 114220.9 3 7 1000.1 190.08 HUMAN 1 11.6786 -29.3199 SYEDAVHSGALND__-p P17987;S551-p SYEDAVHSGALND__ 0.816913456151773 0.280570835389221 -0.0333333333333333 0.116 1.68758050827371 7.27380518852821 -0.0333333333333333 0.116 0.678019132673238 0.187335240042643 -0.438446413846113 1.50842814320575 P17987 TCP1 P17987.S551.p_TCP1 P17987_S551s _1_1_551_551 P17987 P17987|E7EQR6|F5H282 T-complex protein 1 subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9662.9662.4 18.4 18.4 2.141 4 1 1 0 847.9166 3308.6751 S551s TMT10 533 (K) LHPESKDDKHGSYEDAVHsGALND (-) LHPES(0.0)KDDKHGS(0.0)Y(0.0)EDAVHS(0.99)GALND K:TMT10,s:Phosphorylated S TCP1 60856 2 7 1979.1 104.48 HUMAN 1 -1.6876 7.2738 SYEEKRYTCGEAPDY-p P21266;T38-p SYEEKRYTCGEAPDY 0.202417368384527 0.756792422750382 -0.266666666666667 -0.039 13.4586377414958 1.6736549401279 -0.266666666666667 -0.039 0.0450958135124316 0.680196677104333 -2.59404876961709 -0.435205501459029 P21266 GSTM3 P21266.T38.p_GSTM3 P21266_T38t _1_1_38_38 P21266 P21266|A0A0A0MTN3 Glutathione S-transferase Mu 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16977.16977.4 20.85 20.85 6.45 4 1 1 0 725.0971 2817.403 T38t TMT10 36 (K) RYtCGEAPDYDRSQWLDVK (F) RY(0.0)T(0.99)CGEAPDY(0.0)DRS(0.0)QWLDVK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T GSTM3 27015.5 2 3 3239.1 56.19 HUMAN 1 -13.4586 -1.6737 SYEFVSPSPPADVSE-p Q99728;S186-p SYEFVSPSPPADVSE 0.306566064260078 0.106019867045147 0.200333333333333 0.173666666666667 9.61386379128966 12.8768256018031 0.200333333333333 0.173666666666667 0.109298353802444 0.051560537945382 1.91469631643836 2.487545684317 Q99728 BARD1 Q99728.S186.p_BARD1 Q99728_S184sS186s_2_2_184_186 Q99728 Q99728|Q99728-2|Q99728-3 BRCA1-associated RING domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18694.18694.3 12.42 12.42 2.75 6 2 2 0 957.737 2711.2634 S184s S186s TMT10 172 (K) DASAQQDSYEFVsPsPPADVSER (A) DAS(0.0)AQQDS(0.0)Y(0.0)EFVS(0.99)PS(0.99)PPADVS(0.0)ER s:Phosphorylated S BARD1 88129.6 1 8 1495.1 136.58 HUMAN 1 9.6139 12.8768 SYERSMMSPMAERSM-p P18583-5;S1026-p SYERSMMSPMAERSM 0.641735512574995 0.919607867026982 0.0833333333333333 -0.0103333333333333 3.59916085237902 0.513269181370078 0.0833333333333333 -0.0103333333333333 0.436600184362565 0.888532017510735 0.839688979332673 -0.146882271900942 P18583 SON P18583.5.S1026.p_SON P18583-5_S1026s _1_1_1026_1026 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-2|P18583-6 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12671.12671.2 12.76 12.76 3.983 2 1 1 0 674.7875 1268.5999 S1026s TMT10 1023 (R) SMMsPMAER (S) S(0.0)MMS(0.99)PMAER s:Phosphorylated S SON 267429.6 5 14 45.1 778.56 HUMAN 1 3.5992 -0.5133 SYESYGNSRSAPPTR-p P38159;S291-p SYESYGNSRSAPPTR 0.719737881716904 0.255670999258198 -0.151333333333333 -0.118333333333333 2.69599493101573 7.80068849492227 -0.151333333333333 -0.118333333333333 0.537527276175724 0.165932383096741 -0.657958855830746 -1.6000713562388 P38159 RBMX P38159.S291.p_RBMX P38159_S291s _1_1_291_291 P38159 P38159|Q96E39|P38159-2|H3BUY5 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6708.6708.2 11.59 11.59 4.046 5 1 1 0 743.8067 1406.6386 S291s TMT10 283 (R) DSYESYGNsR (S) DS(0.0)Y(0.0)ES(0.0)Y(0.0)GNS(0.99)R s:Phosphorylated S RBMX 42331.1 2 22 102.1 595.29 HUMAN 1 -2.696 -7.8007 SYFQKRNSQTNKTEE-p O75717;S984-p SYFQKRNSQTNKTEE 0.77825191093104 0.0119548606841483 -0.0456666666666667 -0.657 2.09136875143854 26.858762446826 -0.0456666666666667 -0.657 0.617821652660718 0.0020612171881654 -0.528942556764442 -5.52290800242393 O75717 WDHD1 O75717.S984.p_WDHD1 O75717_S984s _1_1_984_984 O75717 O75717|O75717-2 WD repeat and HMG-box DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9324.9324.5 11.86 11.86 11.86 3 1 1 0 609.5374 2963.6932 S984s TMT10 982 (K) RNsQTNKTEEVKEENLK (N) RNS(0.99)QT(0.0)NKT(0.0)EEVKEENLK K:TMT10,s:Phosphorylated S WDHD1 127448.5 1 12 554.1 273.24 HUMAN 1 -2.0914 -26.8588 SYFTFIGTPVQATNM-p O43396;T268-p SYFTFIGTPVQATNM 0.551727758849808 0.463862882029641 -0.0913333333333333 -0.078 4.76709806786489 4.44833131217169 -0.0913333333333333 -0.078 0.333649280932268 0.359059869563915 -1.06119947960365 -1.00173167475735 O43396 TXNL1 O43396.T268.p_TXNL1 O43396_T268t _1_1_268_268 O43396 O43396 Thioredoxin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.35196.35196.3 11.28 11.28 2.52 5 1 1 0 944.8103 2752.442 T268t TMT10 260 (R) ISYFTFIGtPVQATNMNDFK (R) IS(0.0)Y(0.0)FT(0.0)FIGT(0.99)PVQAT(0.0)NMNDFK K:TMT10,t:Phosphorylated T TXNL1 32650.1 1 2 3504.1 49.56 HUMAN 1 -4.7671 -4.4483 SYIFVQESPTPQIKP-p Q5SY16;S249-p SYIFVQESPTPQIKP 0.734788762117455 0.126350116164881 0.0606666666666667 0.216 2.53497333104391 11.8462631157737 0.0606666666666667 0.216 0.557831027633838 0.065369278028351 0.624267106900949 2.30396300971758 Q5SY16 NOL9 Q5SY16.S249.p_NOL9 Q5SY16_S249s _1_1_249_249 Q5SY16 Q5SY16 Polynucleotide 5'-hydroxyl-kinase NOL9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.34329.34329.4 27.58 24.4 2.188 11 1 1 0 1089.8219 4276.2946 S249s TMT10 229 (K) TATVNFITSYPGSSYIFVQEsPTPQIKPEYLALR (S) T(0.0)AT(0.0)VNFIT(0.0)S(0.0)Y(0.0)PGS(0.0)S(0.0)Y(0.0)IFVQES(0.99)PT(0.0)PQIKPEY(0.0)LALR K:TMT10,s:Phosphorylated S NOL9 80576.5 4 1 3019.1 63.11 HUMAN 1 2.535 11.8463 SYITRVGTFRAHSSP-p Q5JU67;T489-p SYITRVGTFRAHSSP 0.576683296043079 0.448211747621822 -0.111666666666667 -0.097 4.39783298055289 4.64599891370039 -0.111666666666667 -0.097 0.363259266728091 0.343083718590377 -0.992452001253163 -1.03856940183629 Q5JU67 C9orf117 Q5JU67.T489.p_C9orf117 Q5JU67_T489t_1_1_489_489 Q5JU67 Q5JU67 Cilia- and flagella-associated protein 157 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28570.28570.3 7.23 4.44 6.092 4 1 1 0 861.4591 2486.3702 T489t M498m TMT10 487 (R) VGtFRAHSSPEmRAPGSLK (R) VGT(0.99)FRAHS(0.0)S(0.0)PEM(1.0)RAPGS(0.0)LK K:TMT10,t:Phosphorylated T,m:Oxidized methionine CFAP157 60703.4 2 1 7221.1 7.23 HUMAN 1 -4.3978 -4.646 SYKELRGTLQKDGWT-p O00192;T838-p SYKELRGTLQKDGWT 0.0703710431234779 0.0175936501308428 -0.471 -0.381666666666667 24.8729113937247 24.1821337099893 -0.471 -0.381666666666667 0.00325618342016093 0.00381756665844752 -5.01166098635301 -4.83379685643496 O00192 ARVCF O00192.T838.p_ARVCF O00192_T838t _1_1_838_838 O00192 O00192|E9PDC3|O00192-2|C9JJX6 Armadillo repeat protein deleted in velo-cardio-facial syndrome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10485.10485.3 7.92 7.92 99 1 1 1 0 494.9527 1402.8782 T838t TMT10 834 (K) ELRGtLQK (D) ELRGT(1.0)LQK K:TMT10,t:Phosphorylated T ARVCF 105324.7 1 7 772.1 227.53 HUMAN 1 -24.8729 -24.1821 SYKFFFKSMDDDFGV-p Q92997;S48-p SYKFFFKSMDDDFGV 0.112544694105773 0.250953330832312 -0.307333333333333 -0.213 19.7960480802801 7.90951152516701 -0.307333333333333 -0.213 0.010480818300962 0.161826204221844 -3.83531616529537 -1.61895222455965 Q92997 DVL3 Q92997.S48.p_DVL3 Q92997_S48s _1_1_48_48 Q92997 Q92997|Q92997-2 Segment polarity protein dishevelled homolog DVL-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27334.27334.4 12.43 12.43 5.783 2 1 1 0 932.2038 3645.8132 S48s TMT10 48 (K) sMDDDFGVVKEEISDDNAKLPCFNGR (V) S(0.99)MDDDFGVVKEEIS(0.0)DDNAKLPCFNGR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DVL3 78395.8 1 1 2133.1 96.37 HUMAN 1 -19.796 -7.9095 SYKYSPKTPPRWAED-p P49792;T799-p SYKYSPKTPPRWAED 0.298138179809024 0.0341785541634956 -0.175666666666667 -0.271333333333333 9.88499364439365 19.7535070582451 -0.175666666666667 -0.271333333333333 0.102683493437054 0.0105839869129207 -1.96173667952435 -3.82272795007376 P49792 RANBP2 P49792.T799.p_RANBP2 P49792_T799t _1_1_799_799 P49792 P49792|J3KNE0|A6NKT7|Q7Z3J3 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18586.19167.4 15.85 11.94 2.111 4 1 1 0 725.1447 2817.5866 T799t TMT10 795 (K) YSPKtPPRWAEDQNSLLK (M) Y(0.0)S(0.0)PKT(0.99)PPRWAEDQNS(0.0)LLK K:TMT10,t:Phosphorylated T RANBP2 362585.9 6 13 9.1 1298.62 HUMAN 1 -9.885 -19.7535 SYLDRVRSLETENRR-p P05783;S100-p SYLDRVRSLETENRR 0.552918441896641 0.0367957713934777 -0.0896666666666667 0.291 4.74966566225582 19.2923740529859 -0.0896666666666667 0.291 0.334991227166856 0.0117696241595684 -1.05797673193107 3.72537536445118 P05783 KRT18 P05783.S100.p_KRT18 P05783_S100s _1_1_100_100 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22207.22207.4 18.92 18.92 3.625 4 1 1 0 558.5403 2151.1719 S100s TMT10 91 (R) LASYLDRVRsLETENR (R) LAS(0.0)Y(0.0)LDRVRS(0.99)LET(0.0)ENR s:Phosphorylated S KRT18 48057 8 19 89.1 623.62 HUMAN 1 -4.7497 19.2924 SYLTFSPSEVKSLRT-p P54886;S659-p SYLTFSPSEVKSLRT 0.618803324936163 0.396894398132859 0.0743333333333333 0.104666666666667 3.87321494011205 5.33621520065069 0.0743333333333333 0.104666666666667 0.409900554662898 0.292670183549716 0.892815635906809 1.1650808062461 P54886 ALDH18A1 P54886.S659.p_ALDH18A1 P54886_S659s _1_1_659_659 P54886 P54886|P54886-2 Delta-1-pyrroline-5-carboxylate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30598.30598.3 15.59 15.59 2.281 5 1 1 0 672.0165 1934.0675 S659s TMT10 650 (K) FASYLTFSPsEVK (S) FAS(0.0)Y(0.0)LT(0.0)FS(0.0)PS(0.99)EVK K:TMT10,s:Phosphorylated S ALDH18A1 88042.4 1 7 2259.1 91 HUMAN 1 3.8732 5.3362 SYNRGGLSPANDTGA-p P30419;S47-p SYNRGGLSPANDTGA 0.633706957274332 0.0725537340856776 -0.097 -0.294333333333333 3.68850590311601 15.1416648196168 -0.097 -0.294333333333333 0.42771000528419 0.030607898889946 -0.857098354471813 -2.90314658678452 P30419 NMT1 P30419.S47.p_NMT1 P30419_S47s _1_1_47_47 P30419 P30419|B7Z8J4 Glycylpeptide N-tetradecanoyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7228.7228.2 18.09 14.13 15.259 2 1 1 0 877.4658 1673.9587 S47s Hydrogen 44 (R) GGLsPANDTGAKK (K) GGLS(0.99)PANDT(0.0)GAKK K:TMT10-Lys-Only,s:Phosphorylated S NMT1 57147.5 13 2 1576.1 130.17 HUMAN 1 -3.6885 -15.1417 SYPGLCQSPFLDSRE-p O14686-3;S1953-p SYPGLCQSPFLDSRE 0.718947568381735 0.177169515262384 0.0523333333333333 0.143666666666667 2.70393277390164 9.88529305256968 0.0523333333333333 0.143666666666667 0.536545704851064 0.102676414549569 0.65960831507016 1.9610058799573 O14686 KMT2D O14686.3.S1953.p_KMT2D O14686-3_S1953s _1_1_1953_1953 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33183.33183.4 27.03 27.03 2.315 8 1 1 0 1110.5473 4359.2103 S1953s TMT10 1922 (R) TPLQRPFLQGGLPLGNLPSSSPMDSYPGLCQsPFLDSR (E) T(0.0)PLQRPFLQGGLPLGNLPS(0.0)S(0.0)S(0.0)PMDS(0.0)Y(0.0)PGLCQS(0.99)PFLDS(0.0)R C:Carbamidomethylation,s:Phosphorylated S KMT2D 600227.3 4 20 17.1 1042.08 HUMAN 1 2.7039 9.8853 SYPKSNSSKEYV___-p O95471;S207-p SYPKSNSSKEYV___ 0.145152146047681 0.00899994986241233 0.684333333333333 -1.06866666666667 17.1034854085772 28.9616781759143 0.684333333333333 -1.06866666666667 0.0194828038951483 0.00127008323207126 3.28304500700603 -6.11307691503568 O95471 CLDN7 O95471.S207.p_CLDN7 O95471_S207s _1_1_207_207 O95471 O95471 Claudin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9961.9961.2 8.19 8.19 8.189 4 1 1 0 726.3622 1371.752 S207s TMT10 204 (K) SNSsKEYV (-) S(0.0)NS(0.0)S(0.99)KEY(0.0)V K:TMT10,s:Phosphorylated S CLDN7 22874.6 1 2 6920.1 8.67 HUMAN 1 17.1035 -28.9617 SYPRTPHTPGTPKSA-p P11137;T1628-p SYPRTPHTPGTPKSA 0.416694906313078 0.00526062627901912 0.155333333333333 -0.584666666666667 7.01592741282639 33.1253833794955 0.155333333333333 -0.584666666666667 0.198795824712937 0.000486924539327484 1.46380093463475 -7.42892444858758 P11137 MAP2 P11137.T1628.p_MAP2 P11137_T1628t _1_1_1628_1628 P11137 P11137|P11137-3|P11137-4|P11137-2 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5211.5211.3 14.21 13.67 3.421 3 1 1 0 491.9343 1393.8204 T1628t TMT10 1625 (R) TPHtPGTPK (S) T(0.0)PHT(0.99)PGT(0.0)PK K:TMT10,t:Phosphorylated T MAP2 199979.2 1 15 117.1 560.28 HUMAN 1 7.0159 -33.1254 SYPSPCASPSPPSSG-p Q9H6S0;S1267-p SYPSPCASPSPPSSG 0.46227088763898 0.0170772890509271 -0.129 -0.335666666666667 6.18046294096782 24.384534506052 -0.129 -0.335666666666667 0.240964855586447 0.00364373302942707 -1.31664855122032 -4.88366751293369 Q9H6S0 YTHDC2 Q9H6S0.S1267.p_YTHDC2 Q9H6S0_S1267s _1_1_1267_1267 Q9H6S0 Q9H6S0 Probable ATP-dependent RNA helicase YTHDC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10423.10706.3 21.43 18.08 2.283 11 1 1 0 874.3997 2541.2179 S1267s TMT10 1255 (K) STDSSSYPSPCAsPSPPSSGK (G) S(0.0)T(0.0)DS(0.0)S(0.0)S(0.0)Y(0.0)PS(0.0)PCAS(0.99)PS(0.0)PPS(0.0)S(0.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S YTHDC2 161671.9 2 12 668.1 249.65 HUMAN 1 -6.1805 -24.3845 SYQLRPGTMIEWGNY-p O75323;T198-p SYQLRPGTMIEWGNY 0.31256981829013 0.0469451955941262 0.143666666666667 0.344333333333333 9.45124988581826 17.7717842982819 0.143666666666667 0.344333333333333 0.113468421014045 0.0167040418798027 1.88651010897193 3.41347527531867 O75323 GBAS O75323.T198.p_GBAS O75323_T198t _1_1_198_198 O75323 O75323|O75323-2 Protein NipSnap homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27202.27202.3 15.41 15.41 2.88 4 1 1 0 846.4055 2457.2335 T198t TMT10 191 (R) SYQLRPGtMIEWGNYWAR (A) S(0.0)Y(0.0)QLRPGT(0.99)MIEWGNY(0.0)WAR t:Phosphorylated T NIPSNAP2 33970.2 1 2 4690.1 27.89 HUMAN 1 9.4512 17.7718 SYQNSPSSDDGIRPL-p Q15648;S1482-p SYQNSPSSDDGIRPL 0.57602742215752 0.0456921667392721 -0.08 0.262333333333333 4.40652412836324 17.9322896585732 -0.08 0.262333333333333 0.362533035295945 0.0160979670506861 -0.994082239500397 3.4457673904407 Q15648 MED1 Q15648.S1482.p_MED1 Q15648_S1479sS1481sS1482s_3_3_1479_1482 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20770.20770.3 9.9 9.9 9.901 8 3 3 0 1057.1274 2928.4627 N1478n S1479s S1481s S1482s TMT10 1475 (K) SYQnsPssDDGIRPLPEYSTEK (H) S(0.0)Y(0.0)QN(1.0)S(0.99)PS(0.99)S(0.99)DDGIRPLPEY(0.0)S(0.0)T(0.0)EK K:TMT10,n:Deamidated,s:Phosphorylated S MED1 169445 5 42 115.1 566.87 HUMAN 1 -4.4065 17.9323 SYRDSYDSYATHNE_-p Q14011;S166-p SYRDSYDSYATHNE_ 0.560049085486317 0.0471650085509636 0.099 0.304666666666667 4.64715024332071 17.7459128285329 0.099 0.304666666666667 0.342992777970523 0.0168038469434766 1.03898065862733 3.40828353945038 Q14011 CIRBP Q14011.S166.p_CIRBP Q14011_S166s _1_1_166_166 Q14011 Q14011 Cold-inducible RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7556.7556.4 8.32 8.32 1.161 13 1 1 0 811.3351 3162.347 S166s TMT10 146 (R) SQSGGYSDRSSGGSYRDSYDsYATHNE (-) S(0.0)QS(0.0)GGY(0.0)S(0.0)DRS(0.0)S(0.0)GGS(0.0)Y(0.0)RDS(0.0)Y(0.0)DS(0.99)Y(0.0)AT(0.0)HNE s:Phosphorylated S CIRBP 18647.7 2 6 2655.1 74.98 HUMAN 1 4.6472 17.7459 SYRLLEDSEESSEET-p O60231;S103-p SYRLLEDSEESSEET 0.398373526432718 0.0379265190434113 0.136 0.268 7.37845192108939 19.0853042723809 0.136 0.268 0.182875197387057 0.0123443882574606 1.52711001593085 3.68209224315762 O60231 DHX16 O60231.S103.p_DHX16 O60231_S103s _1_1_103_103 O60231 O60231 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14829.14829.2 17.89 17.89 3.386 5 1 1 0 1009.9545 1938.9341 S103s TMT10 99 (R) LLEDsEESSEETVSR (A) LLEDS(0.99)EES(0.0)S(0.0)EET(0.0)VS(0.0)R s:Phosphorylated S DHX16 119946.1 4 1 2216.1 93.19 HUMAN 1 7.3785 19.0853 SYRNSLDSFGGRNQG-p Q5BKZ1;S121-p SYRNSLDSFGGRNQG 0.93285358140112 0.940806998270206 0.021 0.00966666666666668 0.595618577180892 0.3779664269426 0.021 0.0096666666666667 0.87184271356668 0.916649608535606 0.169122500500211 0.109625415919324 Q5BKZ1 ZNF326 Q5BKZ1.S121.p_ZNF326 Q5BKZ1_S121s _1_1_121_121 Q5BKZ1 Q5BKZ1 DBIRD complex subunit ZNF326 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.11469.11469.2 7.71 7.71 7.705 2 1 1 0 631.2927 1181.6112 S121s TMT10 117 (R) NSLDsFGGR (N) NS(0.0)LDS(0.99)FGGR s:Phosphorylated S ZNF326 65995 1 7 1326.1 153.85 HUMAN 1 0.5956 0.378 SYRRAVVSGFDFDSP-p Q96DR7;S323-p SYRRAVVSGFDFDSP 0.122554525096102 0.00256376979859587 -0.597666666666667 -0.76 18.9802840808256 39.5775634868728 -0.597666666666667 -0.76 0.0126465362120819 0.000110215747719403 -3.663445134146 -9.94296639626906 Q96DR7 ARHGEF26 Q96DR7.S323.p_ARHGEF26 Q96DR7_S323s _1_1_323_323 Q96DR7 Q96DR7 Rho guanine nucleotide exchange factor 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24238.24238.3 17.45 17.45 4.12 5 1 1 0 694.6775 2002.0533 S323s TMT10 320 (R) AVVsGFDFDSPTSSK (K) AVVS(0.99)GFDFDS(0.0)PT(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ARHGEF26 97914.4 1 9 478.1 300.31 HUMAN 1 -18.9803 -39.5776 SYRRGARSPEDGPSA-p Q8TDY4;S862-p SYRRGARSPEDGPSA 0.582575200829836 0.0459437328866443 -0.102666666666667 -0.32 4.31979096824448 17.8995995208854 -0.102666666666667 -0.32 0.369845980534669 0.0162195965740315 -0.977785335336547 -3.43917883375629 Q8TDY4 ASAP3 Q8TDY4.S862.p_ASAP3 Q8TDY4_S862s _1_1_862_862 Q8TDY4 Q8TDY4|Q8TDY4-3|Q8TDY4-2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3822.3822.3 12.27 12.27 12.265 2 1 1 0 503.5735 1428.7393 S862s TMT10 859 (R) GARsPEDGPSAR (Q) GARS(0.99)PEDGPS(0.0)AR s:Phosphorylated S ASAP3 100237.7 2 2 5371.1 20.01 HUMAN 1 -4.3198 -17.8996 SYRRNDYSRDRGDAY-p P49760;S83-p SYRRNDYSRDRGDAY 0.733661193423071 0.0537054539244176 0.0546666666666666 0.341333333333333 2.54579173815178 16.9301426422678 0.0546666666666666 0.341333333333333 0.556443182944504 0.0202761612219533 0.626544899160783 3.24642738170957 P49760 CLK2 P49760.S83.p_CLK2 P49760_S83sS98s_2_2_83_98 P49760 P49760|P49760-3|B1AVT0|P49760-2 Dual specificity protein kinase CLK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8587.8587.4 8.11 8.11 1.863 9 2 2 0 875.1061 3337.4732 S83s S98s TMT10 80 (R) NDYsRDRGDAYYDTDYRHsYEYQR (E) NDY(0.0)S(0.99)RDRGDAY(0.0)Y(0.0)DT(0.0)DY(0.0)RHS(0.99)Y(0.0)EY(0.0)QR s:Phosphorylated S CLK2 60545.5 2 8 1587.1 129.39 HUMAN 1 2.5458 16.9301 SYRRVMSSPSAMKLL-p Q99728;S410-p SYRRVMSSPSAMKLL 0.902785380781038 0.00224657217920113 0.0186666666666667 -0.89 0.872073464687739 41.0390322949259 0.0186666666666667 -0.89 0.818074119393669 7.87221180609825e-05 0.24147422442627 -10.6087226525349 Q99728 BARD1 Q99728.S410.p_BARD1 Q99728_S410s _1_1_410_410 Q99728 Q99728|Q99728-2|Q99728-3 BRCA1-associated RING domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10137.10137.3 7.06 4.67 1.522 3 1 1 0 544.6188 1551.8751 S410s TMT10 406 (R) RVMSsPSAMK (L) RVMS(0.0)S(0.99)PS(0.0)AMK K:TMT10,s:Phosphorylated S BARD1 88129.6 11 7 1495.1 136.58 HUMAN 1 0.8721 -41.039 SYRSVGGSGGGSFGD-p P02545;S632-p SYRSVGGSGGGSFGD 0.985102205736535 0.296915532107894 0.00299999999999999 -0.100666666666667 0.131034597389385 6.96101723101181 0.00299999999999999 -0.100666666666667 0.970278795188149 0.201325263832615 0.0390131916041224 -1.45378833847891 P02545 LMNA P02545.S632.p_LMNA P02545_S632s _1_1_632_632 P02545 P02545|P02545-3|P02545-4|P02545-5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16076.16286.2 15.47 15.47 1.146 4 1 1 0 938.4435 1795.9136 S632s TMT10 628 (R) SVGGsGGGSFGDNLVTR (S) S(0.0)VGGS(0.99)GGGS(0.0)FGDNLVT(0.0)R s:Phosphorylated S LMNA 74423.5 4 36 60.1 706.83 HUMAN 1 0.131 -6.961 SYSALKRSFEVEEVE-p Q9UHD8-7;S11-p SYSALKRSFEVEEVE 0.754470308718171 0.314966338701214 -0.0456666666666667 -0.156333333333333 2.33774935396146 6.63140507277403 -0.0456666666666667 -0.156333333333333 0.583747541623904 0.217199835863086 -0.58236472933932 -1.39595994008173 Q9UHD8 SEPT9 Q9UHD8.7.S11.p_SEPT9 Q9UHD8-7_S11s _1_1_11_11 Q9UHD8-7 Q9UHD8-7 Isoform 7 of Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15693.15693.4 14.95 14.95 1.129 7 1 1 0 880.4659 3438.8836 S11s TMT10 3 (K) KSYSALKRsFEVEEVETPNSTPPR (R) KS(0.0)Y(0.0)S(0.0)ALKRS(0.99)FEVEEVET(0.0)PNS(0.0)T(0.0)PPR K:TMT10,s:Phosphorylated S SEPT9 63786.5 5 26 110.2 572.91 HUMAN 1 -2.3377 -6.6314 SYSGRSPSPYGRRRS-p Q9NYV4-2;S325-p SYSGRSPSPYGRRRS 0.362969263101371 0.0300001465061648 0.138666666666667 0.300666666666667 8.17509248604698 20.6082758940377 0.138666666666667 0.300666666666667 0.152226671480101 0.00869305466430502 1.66552154501001 4.00683035654647 Q9NYV4 CDK12 Q9NYV4.2.S325.p_CDK12 Q9NYV4-2_S323sS325s_2_2_323_325 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5456.5456.3 7.08 7.08 1.837 7 2 2 0 616.2621 1686.8397 S323s S325s TMT10 316 (R) SGSYSGRsPsPYGR (R) S(0.0)GS(0.0)Y(0.0)S(0.0)GRS(0.99)PS(0.99)PY(0.0)GR s:Phosphorylated S CDK12 163853.1 4 39 59.1 708.76 HUMAN 1 8.1751 20.6083 SYSNSYNSPGGGGGS-p Q12906-7;S796-p SYSNSYNSPGGGGGS 0.167853660719156 0.0799587703347656 0.315666666666667 0.384333333333333 15.4734827364921 14.5598472288266 0.315666666666667 0.384333333333333 0.028356441291263 0.034995747721795 2.96773397874299 2.79454224779072 Q12906 ILF3 Q12906.7.S796.p_ILF3 Q12906-7_S796s _1_1_796_796 Q12906-7 Q12906|Q12906-7 Isoform 7 of Interleukin enhancer-binding factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11194.11194.4 27.5 27.5 1.399 13 1 1 0 948.6534 3711.626 S796s TMT10 780 (K) GYNHGQGSYSYSNSYNsPGGGGGSDYNYESK (F) GY(0.0)NHGQGS(0.0)Y(0.0)S(0.0)Y(0.0)S(0.0)NS(0.0)Y(0.0)NS(0.99)PGGGGGS(0.0)DY(0.0)NY(0.0)ES(0.0)K K:TMT10,s:Phosphorylated S ILF3 96205.6 9 15 130.1 537.24 HUMAN 1 15.4735 14.5598 SYSQDPPSPSPEDER-p O95754;S718-p SYSQDPPSPSPEDER 0.143638422086766 0.0496953017195283 -0.273666666666667 -0.234666666666667 17.2195358082017 17.4360515704833 -0.273666666666667 -0.234666666666667 0.018969086597729 0.0180465771694454 -3.3060000996123 -3.3463864600002 O95754 SEMA4F O95754.S718.p_SEMA4F O95754_S718s _1_1_718_718 O95754 O95754|A0A087WYZ7|O95754-2 Semaphorin-4F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29386.29386.5 21.27 21.27 2.63 8 1 1 0 821.0229 4021.117 S718s TMT10 698 (K) VGLDLGAPPSGTTSYSQDPPsPSPEDERLPLALAK (R) VGLDLGAPPS(0.0)GT(0.0)T(0.0)S(0.0)Y(0.0)S(0.0)QDPPS(0.99)PS(0.0)PEDERLPLALAK K:TMT10,s:Phosphorylated S SEMA4F 84821.9 1 1 5257.1 21.27 HUMAN 1 -17.2195 -17.4361 SYSYRQSSATSSFGG-p P08727;S10-p SYSYRQSSATSSFGG 0.494648752666561 0.00868295677400181 0.121333333333333 0.643 5.62968016107331 29.2329098949079 0.121333333333333 0.643 0.273547017432531 0.00119318836687977 1.2183015066847 6.19260081275192 P08727 KRT19 P08727.S10.p_KRT19 P08727_S10s _1_1_10_10 P08727 P08727 Keratin, type I cytoskeletal 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14116.14116.2 14.76 8.16 1.414 6 1 1 0 932.4431 1783.9136 S10s TMT10 8 (R) QSsATSSFGGLGGGSVR (F) QS(0.0)S(0.99)AT(0.0)S(0.0)S(0.0)FGGLGGGS(0.0)VR s:Phosphorylated S KRT19 44105.2 2 3 383.1 334.07 HUMAN 1 5.6297 29.2329 SYTEEIVSEAESHVS-p Q5QJE6;S141-p SYTEEIVSEAESHVS 0.466667919827382 0.148531234155039 0.115 0.149 6.10918272626571 10.9027762860528 0.115 0.149 0.244952416029684 0.0812311069342639 1.30399031427568 2.13813097644891 Q5QJE6 DNTTIP2 Q5QJE6.S141.p_DNTTIP2 Q5QJE6_S141s _1_1_141_141 Q5QJE6 Q5QJE6|J3KP30 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26896.26896.3 20.2 20.2 3.362 7 1 1 0 840.058 2438.1884 S141s TMT10 133 (K) ESYTEEIVsEAESHVSGISR (I) ES(0.0)Y(0.0)T(0.0)EEIVS(0.99)EAES(0.0)HVS(0.0)GIS(0.0)R s:Phosphorylated S DNTTIP2 84866.9 3 7 448.1 309.47 HUMAN 1 6.1092 10.9028 SYTSGPGSRISSSSF-p P05787;S31-p SYTSGPGSRISSSSF 0.349100588210086 0.190013173716585 0.127666666666667 0.132 8.49102059464638 9.48481582917298 0.127666666666667 0.132 0.14154611066574 0.112594821585602 1.72025173769846 1.891605785448 P05787 KRT8 P05787.S31.p_KRT8 P05787_S31s _1_1_31_31 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10388.10388.3 13.04 13.04 2.699 10 1 1 0 691.3276 1991.9984 S31s TMT10 24 (R) SYTSGPGsRISSSSFSR (V) S(0.0)Y(0.0)T(0.0)S(0.0)GPGS(0.99)RIS(0.0)S(0.0)S(0.0)S(0.0)FS(0.0)R s:Phosphorylated S KRT8 53703.3 2 10 69.1 672.47 HUMAN 1 8.491 9.4848 SYYKSLLSAEEAAKQ-p Q7KZF4;S645-p SYYKSLLSAEEAAKQ 0.350493225948053 0.73059537780321 0.138 0.038 8.45949093737212 1.87905066352926 0.138 0.038 0.142577470741851 0.648776235863535 1.71479186313818 0.481792441724792 Q7KZF4 SND1 Q7KZF4.S645.p_SND1 Q7KZF4_S645s _1_1_645_645 Q7KZF4 Q7KZF4 Staphylococcal nuclease domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19132.19132.2 14.97 8.55 4.026 2 1 1 0 778.9219 1476.8674 S645s TMT10 642 (K) SLLsAEEAAK (Q) S(0.0)LLS(0.99)AEEAAK K:TMT10,s:Phosphorylated S SND1 102679.8 1 4 1505.1 135.67 HUMAN 1 8.4595 1.8791 SYYRRTHSDASDDEA-p Q13017;S1173-p SYYRRTHSDASDDEA 0.0360407965324359 0.00735907798960688 -0.666 -0.497333333333333 33.230082540173 30.5075529573579 -0.666 -0.497333333333333 0.000475326192008324 0.000889702281531532 -7.47834757801434 -6.57738789472919 Q13017 ARHGAP5 Q13017.S1173.p_ARHGAP5 Q13017_S1173sS1176s_2_2_1173_1176 Q13017 Q13017|Q13017-2 Rho GTPase-activating protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11385.11385.3 13.67 13.67 1.114 6 2 2 0 743.9837 2070.0028 S1173s S1176s TMT10 1171 (R) THsDAsDDEAFTTSK (T) T(0.0)HS(0.99)DAS(0.99)DDEAFT(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ARHGAP5 173940.2 4 13 639.1 255.25 HUMAN 1 -33.2301 -30.5076 TAAEGEGSPPAVAAV-p O75179;S19-p TAAEGEGSPPAVAAV 0.798639655158423 0.440504785465389 -0.0566666666666667 0.081 1.8820403601379 4.7428651562806 -0.0566666666666667 0.081 0.648329769993578 0.335516192250512 -0.482517615484278 1.05651462236549 O75179 ANKRD17 O75179.S19.p_ANKRD17 O75179_S19s _1_1_19_19 O75179 O75179|O75179-2|O75179-6|O75179-4|O75179-3|A0A1W2PQ15|O75179-5 Ankyrin repeat domain-containing protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24132.24132.4 36.13 36.13 6.907 5 1 1 0 949.2309 3713.9296 S19s TMT10 4 (K) ATVPVAAATAAEGEGsPPAVAAVAGPPAAAEVGGGVGGSSR (A) AT(0.0)VPVAAAT(0.0)AAEGEGS(0.99)PPAVAAVAGPPAAAEVGGGVGGS(0.0)S(0.0)R s:Phosphorylated S ANKRD17 276135.9 4 2 287.2 383.69 HUMAN 1 -1.882 4.7429 TAAELLQSQGSQAGG-p Q14141;S408-p TAAELLQSQGSQAGG 0.295125154480667 0.861820839821569 -0.160333333333333 -0.035 9.99096385169445 0.911334071692022 -0.160333333333333 -0.035 0.100208281609294 0.810711983991292 -1.98014060421467 -0.251462725863005 Q14141 SEPT6 Q14141.S408.p_SEPT6 Q14141_S408s _1_1_408_408 Q14141 Q14141|B1AMS2|Q14141-4|Q14141-2 Septin-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14424.14424.3 18.18 12.23 2.396 5 1 1 0 890.4736 2589.436 S408s TMT10 401 (K) TAAELLQsQGSQAGGSQTLKR (D) T(0.0)AAELLQS(0.99)QGS(0.0)QAGGS(0.0)QT(0.0)LKR K:TMT10,s:Phosphorylated S SEPT6 50115.1 2 4 2582.3 77.62 HUMAN 1 -9.991 -0.9113 TAAELRQSVSEVVRG-p Q9BZ29-4;S32-p TAAELRQSVSEVVRG 0.662333605671053 0.49026413185222 0.0996666666666666 -0.0816666666666666 3.35205959634004 4.13866751345775 0.0996666666666667 -0.0816666666666666 0.46216179400374 0.385596646879816 0.791055775257173 -0.943381049194687 Q9BZ29 DOCK9 Q9BZ29.4.S32.p_DOCK9 Q9BZ29-4_S32s _1_1_32_32 Q9BZ29-4 Q9BZ29-4|Q9BZ29-3 Isoform 4 of Dedicator of cytokinesis protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15219.15219.4 7.4 7.4 1.113 4 1 1 0 659.8676 2556.4874 S32s TMT10 19 (R) ALSKPGTAAELRQsVSEVVR (G) ALS(0.0)KPGT(0.0)AAELRQS(0.99)VS(0.0)EVVR K:TMT10,s:Phosphorylated S DOCK9 241123.4 1 1 1592.1 129.29 HUMAN 1 3.3521 -4.1387 TAAENKASPAGTAGG-p Q12962;S44-p TAAENKASPAGTAGG 0.392132533800439 0.00709455325025766 0.210333333333333 0.457666666666667 7.49811027620358 30.7863848712257 0.210333333333333 0.457666666666667 0.177905335220797 0.000834375441559288 1.54795341710654 6.66406786955668 Q12962 TAF10 Q12962.S44.p_TAF10 Q12962_S44s _1_1_44_44 Q12962 Q12962 Transcription initiation factor TFIID subunit 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.12239.12239.3 25.6 25.6 2.339 3 1 1 0 758.3805 2193.1574 S44s TMT10 43 (K) AsPAGTAGGPGAGAAAGGTGPLAAR (A) AS(0.99)PAGT(0.0)AGGPGAGAAAGGT(0.0)GPLAAR s:Phosphorylated S TAF10 21825 2 2 3021.1 63.09 HUMAN 1 7.4981 30.7864 TAAFRALSQGVESVK-p O43615;S180-p TAAFRALSQGVESVK 0.328079739434141 0.0404571609153912 -0.139666666666667 -0.413333333333333 9.05244457329785 18.6778259547032 -0.139666666666667 -0.413333333333333 0.124381429177116 0.0135586797973967 -1.8174418065658 -3.59768089823768 O43615 TIMM44 O43615.S180.p_TIMM44 O43615_S180s _1_1_180_180 O43615 O43615 Mitochondrial import inner membrane translocase subunit TIM44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14699.14699.3 11.07 11.07 4.269 2 1 1 0 638.3741 1833.1413 S180s TMT10 178 (R) ALsQGVESVKK (E) ALS(0.99)QGVES(0.0)VKK K:TMT10,s:Phosphorylated S TIMM44 51697.1 1 1 6542.1 11.07 HUMAN 1 -9.0524 -18.6778 TAAGEYDSVSESEDE-p Q9BZE4;S468-p TAAGEYDSVSESEDE 0.911605742223265 0.509872591451919 0.0193333333333333 0.102 0.787512415558438 3.92149721166858 0.0193333333333333 0.102 0.83415884355436 0.40536876220806 0.219694627398806 0.901943114723158 Q9BZE4 GTPBP4 Q9BZE4.S468.p_GTPBP4 Q9BZE4_S468sS470sS472s_3_3_468_472 Q9BZE4 Q9BZE4|Q9BZE4-2 Nucleolar GTP-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25446.25446.5 7.02 7.02 7.018 5 3 3 0 963.4454 4573.2958 S468s S470s S472s TMT10 449 (K) KLEELEKEEELRTAAGEYDsVsEsEDEEMLEIR (Q) KLEELEKEEELRT(0.0)AAGEY(0.0)DS(0.99)VS(0.99)ES(0.99)EDEEMLEIR K:TMT10,s:Phosphorylated S GTPBP4 74362.6 1 5 3169.1 58.8 HUMAN 1 0.7875 3.9215 TAANSRDTIFQKERF-p Q05655-2;T218-p TAANSRDTIFQKERF 0.0731279569456878 0.0101942314249153 0.573333333333333 0.651333333333333 24.4445657746843 27.9742443312609 0.573333333333333 0.651333333333333 0.00359371326368414 0.00159432026696208 4.90446394818615 5.83025968034664 Q05655 PRKCD Q05655.2.T218.p_PRKCD Q05655-2_T218t _1_1_218_218 Q05655-2 Q05655-2 Isoform 2 of Protein kinase C delta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11555.11555.3 14.38 9.34 2.074 4 1 1 0 736.7011 2128.1221 T218t TMT10 208 (R) CTGTAANSRDtIFQK (E) CT(0.0)GT(0.0)AANS(0.0)RDT(0.99)IFQK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T PRKCD 82263.9 2 3 687.1 243.52 HUMAN 1 24.4446 27.9742 TAAVCGETDEEAGES-p Q9ULL5-3;T1561-p TAAVCGETDEEAGES 0.148266672319898 0.277595264999349 0.272 0.138333333333333 16.7944399421049 7.33339399001626 0.272 0.138333333333333 0.0209197266652069 0.184782398920662 3.222256881578 1.51881522118825 Q9ULL5 PRR12 Q9ULL5.3.T1561.p_PRR12 Q9ULL5-3_T1561tS1568s_2_2_1561_1568 Q9ULL5-3 Q9ULL5-3|Q9ULL5-2 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16930.16930.5 21.85 21.85 21.849 3 2 2 0 649.8883 3085.4784 T1561t S1568s TMT10 1551 (K) KQETAAVCGEtDEEAGEsGGEGIFR (E) KQET(0.0)AAVCGET(0.99)DEEAGES(0.99)GGEGIFR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S PRR12 212010 4 25 182.1 477.91 HUMAN 1 16.7944 7.3334 TADCSLRSPSGREVE-p Q147X3;S199-p TADCSLRSPSGREVE 0.176527526104725 0.0327294099456349 -0.240333333333333 -0.386333333333333 14.9387593454596 20.0373823152988 -0.240333333333333 -0.386333333333333 0.0320718539436058 0.00991429343099105 -2.86697330841302 -3.8833351415293 Q147X3 NAA30 Q147X3.S199.p_NAA30 Q147X3_S199s _1_1_199_199 Q147X3 Q147X3|Q147X3-2 N-alpha-acetyltransferase 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23649.23649.4 20 16.4 1.122 8 1 1 0 1097.7517 4308.0371 S199s TMT10 167 (R) NGLAEGTEQEEEEEDEQVRLLSSSLTADCSLRsPSGR (E) NGLAEGT(0.0)EQEEEEEDEQVRLLS(0.0)S(0.0)S(0.0)LT(0.0)ADCS(0.0)LRS(0.99)PS(0.0)GR C:Carbamidomethylation,s:Phosphorylated S NAA30 39889.4 10 6 1035.1 185.79 HUMAN 1 -14.9388 -20.0374 TADPGGSSETSSQVL-p Q01831;S347-p TADPGGSSETSSQVL 0.0395731079578075 0.0036155237814501 0.531666666666667 0.603 31.4394880632422 36.3116968339 0.531666666666667 0.603 0.000717878908266604 0.000233792360901654 6.88233120054413 8.5898650452865 Q01831 XPC Q01831.S347.p_XPC Q01831_S346sS347s_2_2_346_347 Q01831 Q01831|Q01831-2 DNA repair protein complementing XP-C cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15410.15410.4 22.42 22.42 1.149 7 2 2 0 808.4018 3070.6624 S346s S347s TMT10 339 (R) LTADPGGssETSSQVLENHTKPK (T) LT(0.0)ADPGGS(0.99)S(0.99)ET(0.0)S(0.0)S(0.0)QVLENHT(0.0)KPK K:TMT10,s:Phosphorylated S XPC 106806.6 2 10 780.1 226.3 HUMAN 1 31.4395 36.3117 TADRWRVSLDVNHFA-p P04792;S98-p TADRWRVSLDVNHFA 0.0726226250911071 0.0441285833696939 -0.454666666666667 -0.240666666666667 24.4894150917095 18.1495382081883 -0.454666666666667 -0.240666666666667 0.00355679218259958 0.0153125027315539 -4.91561284065852 -3.48970548045852 P04792 HSPB1 P04792.S98.p_HSPB1 P04792_S98s _1_1_98_98 P04792 P04792|F8WE04 Heat shock protein beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26540.26540.4 18.56 18.56 11.146 2 1 1 0 581.3083 2242.2484 S98s TMT10 97 (R) VsLDVNHFAPDELTVK (T) VS(0.99)LDVNHFAPDELT(0.0)VK K:TMT10,s:Phosphorylated S HSPB1 22839.1 12 9 357.1 346.69 HUMAN 1 -24.4894 -18.1495 TADWFGVSKDSDSTQ-p Q96CC6;S92-p TADWFGVSKDSDSTQ 0.118403246417576 0.904336901902555 -0.279333333333333 -0.018 19.2748446959644 0.609062831393157 -0.279333333333333 -0.018 0.011817225702778 0.869147963399959 -3.72502350329781 -0.17270398350363 Q96CC6 RHBDF1 Q96CC6.S92.p_RHBDF1 Q96CC6_S92s _1_1_92_92 Q96CC6 Q96CC6|F8WBS4 Inactive rhomboid protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18373.18373.3 17.25 9.85 16.739 2 1 1 0 587.975 1681.9426 S92s TMT10 83 (R) RGTADWFGVsK (D) RGT(0.0)ADWFGVS(0.99)K K:TMT10,s:Phosphorylated S RHBDF1 98996.6 4 2 1411.1 145.35 HUMAN 1 -19.2748 -0.6091 TAEADSESDHEVPEP-p Q9BPX3;S975-p TAEADSESDHEVPEP 0.666639852843335 0.599573782982173 0.0603333333333333 0.0553333333333334 3.29081932899995 3.01060364639944 0.0603333333333333 0.0553333333333334 0.468724945339134 0.499965037646752 0.778886589165807 0.722463590440541 Q9BPX3 NCAPG Q9BPX3.S975.p_NCAPG Q9BPX3_S973sS975s_2_2_973_975 Q9BPX3 Q9BPX3 Condensin complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13605.13605.2 17.25 17.25 5.491 4 2 2 0 1562.132 2963.3287 S973s S975s TMT10 966 (R) CQTAEADsEsDHEVPEPESEMK (M) CQT(0.0)AEADS(0.99)ES(0.99)DHEVPEPES(0.0)EMK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NCAPG 115416.1 13 8 1123.1 174.85 HUMAN 1 3.2908 3.0106 TAEADSSSPTGILAT-p A0MZ66-3;S494-p TAEADSSSPTGILAT 0.19935394114359 0.01808468616148 0.296 -0.443333333333333 13.6266340055423 23.9980488540862 0.296 -0.443333333333333 0.0433847000741085 0.00398286067529037 2.62461984393397 -4.78874072013692 A0MZ66 SHTN1 A0MZ66.3.S494.p_SHTN1 A0MZ66-3_S494s _1_1_494_494 A0MZ66-3 A0MZ66-6|A0MZ66-5|A0MZ66-4|A0MZ66-8|A0MZ66-7|A0MZ66-3 Isoform 3 of Shootin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19702.19702.2 18.71 18.71 1.124 8 1 1 0 1245.1238 2409.2761 S494s TMT10 486 (K) VTAEADSSsPTGILATSESK (S) VT(0.0)AEADS(0.0)S(0.0)S(0.99)PT(0.0)GILAT(0.0)S(0.0)ES(0.0)K K:TMT10,s:Phosphorylated S SHTN1 74064.4 10 6 838.1 214.92 HUMAN 1 13.6266 -23.998 TAEEDSGTDSEYDES-p Q96K76;T1015-p TAEEDSGTDSEYDES 0.488088514771249 0.889370351481175 -0.144333333333333 0.0175 5.7367269696322 0.715142363536504 -0.144333333333333 0.0175 0.266886928168373 0.84817557844865 -1.23751821031058 0.200795798775742 Q96K76 USP47 Q96K76.T1015.p_USP47 Q96K76_S1013sT1015t_2_2_1013_1015 Q96K76 Q96K76|Q96K76-4|Q96K76-2 Ubiquitin carboxyl-terminal hydrolase 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15402.15402.3 8.83 8.83 1.235 7 2 2 0 1109.4789 3166.4791 S1013s T1015t TMT10 1003 (K) KETWDTAEEDsGtDSEYDESGK (S) KET(0.0)WDT(0.0)AEEDS(0.99)GT(0.99)DS(0.0)EY(0.0)DES(0.0)GK K:TMT10,s:Phosphorylated S,t:Phosphorylated T USP47 158677.8 5 12 770.1 227.83 HUMAN 2 -5.7367 0.7151 TAEETGLTPLETSRK-p Q13042;T581-p TAEETGLTPLETSRK 0.815451491549817 0.582023472940159 0.0373333333333333 0.0523333333333334 1.70041202084071 3.17260715017686 0.0373333333333333 0.0522810737359607 0.676018837560568 0.481658562265153 0.441384257318884 0.755148376618861 Q13042 CDC16 Q13042.T581.p_CDC16 Q13042_T581t _1_1_581_581 Q13042 Q13042|Q13042-2|Q13042-3|Q13042-4|Q5T8C6 Cell division cycle protein 16 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15675.15675.2 15.45 15.45 3.363 5 1 1 0 971.4734 1861.9705 T581t TMT10 573 (K) QTAEETGLtPLETSR (K) QT(0.0)AEET(0.0)GLT(0.99)PLET(0.0)S(0.0)R t:Phosphorylated T CDC16 72453.1 2 2 3652.1 46.07 HUMAN 1 1.7004 3.1726 TAEFKSATFPNAGPR-p Q86X27;T361-p TAEFKSATFPNAGPR 0.703433226689197 0.116279590412798 0.073 0.175333333333333 2.87265459774303 12.3269815121561 0.073 0.175333333333333 0.516100809461715 0.0585196673545285 0.694426157998216 2.38923934774562 Q86X27 RALGPS2 Q86X27.T361.p_RALGPS2 Q86X27_T361t _1_1_361_361 Q86X27 Q86X27|Q86X27-3 Ras-specific guanine nucleotide-releasing factor RalGPS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9798.9798.2 12.06 12.06 2.672 2 1 1 0 663.8239 1246.6742 T361t TMT10 359 (K) SAtFPNAGPR (H) S(0.0)AT(0.99)FPNAGPR t:Phosphorylated T RALGPS2 65508.3 4 9 614.1 261.34 HUMAN 1 2.8727 12.327 TAEKLENSPGHGKSP-p Q8IY63;S924-p TAEKLENSPGHGKSP 0.729957663847628 0.0393465291354279 0.0543333333333333 -0.342 2.59334049384108 18.854548292015 0.0543333333333333 -0.342 0.550384190617469 0.0130180270852652 0.636531612880878 -3.63416707310388 Q8IY63 AMOTL1 Q8IY63.S924.p_AMOTL1 Q8IY63_S924s _1_1_924_924 Q8IY63 Q8IY63 Angiomotin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6790.6790.4 12.67 12.67 5.237 2 1 1 0 548.7966 2112.2016 S924s TMT10 916 (K) GTAEKLENsPGHGK (S) GT(0.0)AEKLENS(0.99)PGHGK K:TMT10,s:Phosphorylated S AMOTL1 106914.7 1 6 1931.1 106.33 HUMAN 1 2.5933 -18.8545 TAEKNASSPEKAKGR-p Q9ULW0;S186-p TAEKNASSPEKAKGR 0.0658438295661245 0.00153816434231582 0.928666666666667 -1.75366666666667 25.516896257564 45.3003203269333 0.928666666666667 -1.75366666666667 0.00280743929446968 2.95099155939737e-05 5.17589326980449 -12.7930569593951 Q9ULW0 TPX2 Q9ULW0.S186.p_TPX2 Q9ULW0_S185sS186s_2_2_185_186 Q9ULW0 Q9ULW0-2 Targeting protein for Xklp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6082.6082.5 14.5 14.5 4.778 4 2 2 0 761.3935 3642.9948 S185s S186s TMT10 167 (K) KKPEEEGSAHQDTAEKNAssPEK (A) KKPEEEGS(0.0)AHQDT(0.0)AEKNAS(0.99)S(0.99)PEK K:TMT10,s:Phosphorylated S TPX2 86279.1 1 14 599.1 263.33 HUMAN 1 25.5169 -45.3003 TAEKRVATPVDWKDG-p P30041;T177-p TAEKRVATPVDWKDG 0.800893351204561 0.0855220698390721 0.0463333333333333 0.282 1.85646593796765 14.1338789402094 0.0463333333333333 0.282 0.652158871076983 0.0386022043977933 0.476775427797978 2.71588402674346 P30041 PRDX6 P30041.T177.p_PRDX6 P30041_T177t _1_1_177_177 P30041 P30041 Peroxiredoxin-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26062.26062.4 24.08 22.15 3.217 3 1 1 0 913.2328 3569.9492 T177t TMT10 174 (K) RVAtPVDWKDGDSVMVLPTIPEEEAK (K) RVAT(0.99)PVDWKDGDS(0.0)VMVLPT(0.0)IPEEEAK K:TMT10,t:Phosphorylated T PRDX6 25148.6 2 3 3594.1 47.5 HUMAN 1 1.8565 14.1339 TAENSPVTPVGAQKT-p Q15596;T854-p TAENSPVTPVGAQKT 0.770856722813785 0.52516698662915 0.117666666666667 0.071 2.16642227882708 3.75804546863033 0.117666666666667 0.071 0.607236365364854 0.420916017957085 0.545349964333279 0.870446708179983 Q15596 NCOA2 Q15596.T854.p_NCOA2 Q15596_T854t _1_1_854_854 Q15596 Q15596|E7EWM1 Nuclear receptor coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35084.35084.4 20.96 20.96 1.11 3 1 1 0 769.9102 2996.6491 T854t TMT10 837 (K) QAIINDLMQLTAENSPVtPVGAQK (T) Q(0.0)AIIN(0.0)DLM(0.0)QLT(0.0)AEN(0.0)S(0.0)PVT(0.99)PVGAQK K:TMT10,t:Phosphorylated T NCOA2 160009.7 1 15 290.1 381.81 HUMAN 1 2.1664 3.758 TAFGGWKSVESVPKL-p P11766;S324-p TAFGGWKSVESVPKL 0.25821426512945 0.00978185688277514 -0.250333333333333 -0.493 11.1729037757335 28.2861686034265 -0.250333333333333 -0.493 0.0763325239104018 0.00148382655698179 -2.18642869149546 -5.91848292067571 P11766 ADH5 P11766.S324.p_ADH5 P11766_S324s _1_1_324_324 P11766 P11766 Alcohol dehydrogenase class-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20674.20674.3 12.33 12.33 1.115 3 1 1 0 773.0916 2237.2897 S324s TMT10 316 (K) GTAFGGWKsVESVPK (L) GT(0.0)AFGGWKS(0.99)VES(0.0)VPK K:TMT10,s:Phosphorylated S ADH5 40579.3 2 1 3445.1 50.78 HUMAN 1 -11.1729 -28.2862 TAGGTKGTVIKVPLK-p E7EW20;T405-p TAGGTKGTVIKVPLK 0.0866557243462627 0.0123363927352173 -0.628666666666667 0.906333333333333 22.7305740115667 26.651734515467 -0.628666666666667 0.906333333333333 0.00533264408713981 0.00216185493464583 -4.49102254300628 5.46722713194349 E7EW20 NotFound E7EW20.T405.p_NotFound E7EW20_T405t _1_1_405_405 E7EW20 E7EW20|Q9UM54|A0A0D9SGC1|Q9UM54-1|Q9UM54-4|Q9UM54-6|Q9UM54-2|Q9UM54-5|A0A0A0MRM8 Unconventional myosin-VI HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19568.19568.3 11.17 11.17 99 1 1 1 0 574.702 1642.1234 T405t TMT10 404 (K) GtVIKVPLK (V) GT(1.0)VIKVPLK K:TMT10,t:Phosphorylated T MYO6 151234.9 6 2 1416.1 144.52 HUMAN 1 -22.7306 26.6517 TAGHRANSPSLFGTE-p Q96B97;S587-p TAGHRANSPSLFGTE 0.837987362439317 0.216510852703237 0.0306666666666667 -0.252333333333333 1.48582737995566 8.74173449618203 0.0306666666666667 -0.252333333333333 0.710259844604129 0.13360618102641 0.391663938776413 -1.76304241733261 Q96B97 SH3KBP1 Q96B97.S587.p_SH3KBP1 Q96B97_S587s _1_1_587_587 Q96B97 Q96B97|Q96B97-2|Q96B97-3 SH3 domain-containing kinase-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14197.14197.3 14.25 14.25 3.231 3 1 1 0 657.684 1891.0689 S587s Hydrogen 585 (R) ANsPSLFGTEGKPK (M) ANS(0.99)PS(0.0)LFGT(0.0)EGKPK K:TMT10-Lys-Only,s:Phosphorylated S SH3KBP1 73296.1 2 4 2944.1 65.24 HUMAN 1 1.4858 -8.7417 TAGKRKASGPPVSEL-p P16402;S37-p TAGKRKASGPPVSEL 0.745571387608508 0.145704550877964 -0.0536666666666667 -0.165 2.42021935712623 11.0201829552557 -0.0536666666666667 -0.165 0.572767100450577 0.079064531977934 -0.599975021994427 -2.1586703360321 P16402 HIST1H1D P16402.S37.p_HIST1H1D P16402_S37s _1_1_37_37 P16402 P16402|P10412|P16403 Histone H1.3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18351.18351.2 12.63 12.63 4.64 3 1 1 0 933.0304 1785.0886 S37s Hydrogen 35 (R) KAsGPPVSELITK (A) KAS(0.99)GPPVS(0.0)ELIT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S HIST1H1D 22349.5 9 16 738.1 234.77 HUMAN 1 -2.4202 -11.0202 TAGSRQPSVETLDSP-p F8WA39;S43-p TAGSRQPSVETLDSP 0.360048449906009 0.636600782980489 0.134 -0.049 8.24634479591745 2.66961693405732 0.134 -0.049 0.149749548071613 0.540802021847798 1.67787000253232 -0.652384074410251 F8WA39 MTMR1 F8WA39.S43.p_MTMR1 F8WA39_S43s_1_1_43_43 F8WA39 F8WA39|Q13613|Q13613-2|Q8NEC6|E9PPP8 Myotubularin-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20967.20967.3 15.94 14.11 2.78 5 1 1 0 817.0402 2386.1546 Q41q S43s Hydrogen 41 (R) qPsVETLDSPTGSHVEWCK (Q) Q(1.0)PS(0.99)VET(0.0)LDS(0.0)PT(0.0)GS(0.0)HVEWCK C:Carbamidomethylation,K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S MTMR1 76458.3 6 1 3783.1 43.12 HUMAN 1 8.2463 -2.6696 TAHPRIISAPEMRQE-p P24593;S179-p TAHPRIISAPEMRQE 0.824470084373033 0.0013535533163748 0.032 0.988666666666667 1.61635076542431 46.5819572311508 0.032 0.988666666666667 0.689231191538542 2.19686958835645e-05 0.422058122986676 13.5285302785606 P24593 IGFBP5 P24593.S179.p_IGFBP5 P24593_S179s _1_1_179_179 P24593 P24593 Insulin-like growth factor-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17567.17567.2 11.08 5.05 99 1 1 1 0 613.3155 1145.655 S179s TMT10 177 (R) IIsAPEMR (Q) IIS(1.0)APEMR s:Phosphorylated S IGFBP5 31596.7 1 2 2059.1 100.08 HUMAN 1 1.6164 46.582 TAILAPGSPASPPGS-p P25440;S298-p TAILAPGSPASPPGS 0.953803111483038 0.264550314752512 -0.00900000000000002 -0.109 0.402926520174537 7.60559154980604 -0.00900000000000002 -0.109 0.911396482239543 0.173556484656511 -0.116581321614881 -1.56618568649815 P25440 BRD2 P25440.S298.p_BRD2 P25440_S298sS301s_2_2_298_301 P25440 P25440|P25440-3|P25440-4|E9PIQ3 Bromodomain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21244.21448.5 21.25 19.09 4.913 8 2 2 0 741.9956 3546.0146 S298s S301s TMT10 281 (K) RKADTTTPTPTAILAPGsPAsPPGSLEPK (A) RKADT(0.0)T(0.0)T(0.0)PT(0.0)PT(0.0)AILAPGS(0.99)PAS(0.99)PPGS(0.0)LEPK K:TMT10,s:Phosphorylated S BRD2 88344.5 13 5 1414.1 145 HUMAN 1 -0.4029 -7.6056 TAINRSPSPISNQPS-p F6SS63;S385-p TAINRSPSPISNQPS 0.80012376994327 0.162936937377694 0.0446666666666667 0.144333333333333 1.86675787455896 10.3597631026149 0.0446666666666667 0.144333333333333 0.650615210896136 0.09204997814733 0.479088166704096 2.04342875476553 F6SS63 NotFound F6SS63.S385.p_NotFound F6SS63_S385s _1_1_385_385 F6SS63 F6SS63 TAK1-binding protein 3, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14418.14418.5 17.15 13.17 1.274 7 1 1 0 759.8139 3715.0655 S385s TMT10 365 (K) KIEITVEPSQRPGTAINRSPsPISNQPSPR (N) KIEIT(0.0)VEPS(0.0)QRPGT(0.0)AINRS(0.0)PS(0.99)PIS(0.0)NQPS(0.0)PR K:TMT10,s:Phosphorylated S TAB3 67485.4 5 5 1606.1 128.05 HUMAN 1 1.8668 10.3598 TAIPEPASPQLLETP-p Q14676;S1775-p TAIPEPASPQLLETP 0.82811120087959 0.0584454148473786 -0.031 0.22 1.5726560044905 16.4265269557422 -0.031 0.22 0.696200610129101 0.0227691754929814 -0.411936599393692 3.14822394653723 Q14676 MDC1 Q14676.S1775.p_MDC1 Q14676_S1775s _1_1_1775_1775 Q14676 Q14676|Q14676-2|Q14676-3 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27101.27101.4 32.32 32.32 7.797 5 1 1 0 870.4693 3398.8935 S1775s TMT10 1763 (R) AAESLTAIPEPAsPQLLETPIHASQIQK (V) AAES(0.0)LT(0.0)AIPEPAS(0.99)PQLLET(0.0)PIHAS(0.0)QIQK K:TMT10,s:Phosphorylated S MDC1 227803.2 6 53 6.1 1662.62 HUMAN 1 -1.5727 16.4265 TAIRRIGSVTSRQTS-p Q99569;S290-p TAIRRIGSVTSRQTS 0.369279912757546 0.668967687442936 0.135333333333333 -0.091 8.02524949499386 2.38856972870063 0.135333333333333 -0.091 0.157570549847005 0.576956442405735 1.63954045468435 -0.593158024382707 Q99569 PKP4 Q99569.S290.p_PKP4 Q99569_S290s _1_1_290_290 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8383.8383.2 10.76 3.04 2.385 3 1 1 0 514.7707 948.5676 S290s TMT10 288 (R) IGsVTSR (Q) IGS(0.99)VT(0.0)S(0.0)R s:Phosphorylated S PKP4 132664.7 5 10 122.1 546.31 HUMAN 1 8.0252 -2.3886 TAITKVRTPVMNSEA-p Q15061;T394-p TAITKVRTPVMNSEA 0.608773679979832 0.014808098748328 -0.0773333333333333 -0.419666666666667 3.98998344526466 25.3299454960649 -0.0773333333333334 -0.419666666666667 0.399026423395569 0.00293093002817629 -0.915214457466936 -5.12132784756197 Q15061 WDR43 Q15061.T394.p_WDR43 Q15061_T394t _1_1_394_394 Q15061 Q15061 WD repeat-containing protein 43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9396.9396.3 11.74 11.74 6.594 2 1 1 0 590.651 1689.9722 T394t TMT10 392 (K) VRtPVMNSEAK (V) VRT(0.99)PVMNS(0.0)EAK K:TMT10,t:Phosphorylated T WDR43 75859.2 4 4 2318.1 87.99 HUMAN 1 -3.99 -25.3299 TAKADAASSLTVDVT-p Q9H8Y8-3;S420-p TAKADAASSLTVDVT 0.760050822118339 0.0262566893169746 0.044 -0.291 2.28523914473908 21.485823753793 0.044 -0.291 0.590848429544558 0.00710260437639249 0.571083032114997 -4.2010210944863 Q9H8Y8 GORASP2 Q9H8Y8.3.S420.p_GORASP2 Q9H8Y8-3_S420s _1_1_420_420 Q9H8Y8-3 Q9H8Y8-3|Q9H8Y8-2 Isoform 3 of Golgi reassembly-stacking protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20813.20813.3 13.55 12.02 1.605 5 1 1 0 728.0547 2102.1745 S420s TMT10 416 (K) ADAAsSLTVDVTPPTAK (A) ADAAS(0.99)S(0.0)LT(0.0)VDVT(0.0)PPT(0.0)AK K:TMT10,s:Phosphorylated S GORASP2 48958.5 2 6 992.1 191.2 HUMAN 1 2.2852 -21.4858 TAKEFADSLGIPFLE-p Q9H0U4;S142-p TAKEFADSLGIPFLE 0.936234507605524 0.764274574239123 -0.012 0.033 0.557096559356767 1.61246756872893 -0.012 0.033 0.879610376709632 0.689847735680733 -0.158766190574719 0.421115117441961 Q9H0U4 RAB1B Q9H0U4.S142.p_RAB1B Q9H0U4_S142s _1_1_142_142 Q9H0U4 P62820|Q9H0U4|Q92928|E7END7|E9PLD0|P62820-2 Ras-related protein Rab-1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34677.34677.3 17.59 17.59 11.276 3 1 1 0 755.0601 2183.2 S142s TMT10 138 (K) EFADsLGIPFLETSAK (N) EFADS(0.99)LGIPFLET(0.0)S(0.0)AK K:TMT10,s:Phosphorylated S RAB1B 22341.9 1 23 2008.2 102.72 HUMAN 1 -0.5571 1.6125 TAKELNVSFINEKKY-p P49585;S233-p TAKELNVSFINEKKY 0.500846288121023 0.00905483037403229 -0.208 -0.685333333333333 5.53624293339863 28.9071909013709 -0.208 -0.685333333333333 0.279496070655419 0.00128611827652304 -1.20148320744805 -6.09719857205316 P49585 PCYT1A P49585.S233.p_PCYT1A P49585_S233s _1_1_233_233 P49585 C9JEJ2|P49585 Choline-phosphate cytidylyltransferase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22083.22083.3 16.13 16.13 99 1 1 1 0 696.728 2008.2046 S233s TMT10 229 (K) ELNVsFINEKK (Y) ELNVS(1.0)FINEKK K:TMT10,s:Phosphorylated S PCYT1A 42072.6 9 4 694.1 242.25 HUMAN 1 -5.5362 -28.9072 TAKIMVHSPTKPASY-p Q5VVJ2;S110-p TAKIMVHSPTKPASY 0.0625249430971656 0.119877713858731 -0.813666666666667 -0.425666666666667 26.1812562348307 12.1474837752865 -0.813666666666667 -0.425666666666667 0.00240920844324132 0.0609890154364723 -5.34930948185534 -2.35732845055796 Q5VVJ2 MYSM1 Q5VVJ2.S110.p_MYSM1 Q5VVJ2_S110s _1_1_110_110 Q5VVJ2 Q5VVJ2 Histone H2A deubiquitinase MYSM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15159.15159.4 16.51 16.51 1.813 5 1 1 0 603.8372 2332.3666 S110s TMT10 106 (K) IMVHsPTKPASYSVK (W) IMVHS(0.99)PT(0.0)KPAS(0.0)Y(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S MYSM1 96171.6 1 1 2993.1 63.85 HUMAN 1 -26.1813 -12.1475 TAKRKRESESESDET-p O60832;S451-p TAKRKRESESESDET 0.663377338382 0.0259210237700486 0.062 0.316666666666667 3.33487406623789 21.5705276069006 0.062 0.316666666666667 0.463994244376791 0.00696541888897599 0.787645632368431 4.22005414492145 O60832 DKC1 O60832.S451.p_DKC1 O60832_S451sS453sS455s_3_3_451_455 O60832 O60832 H/ACA ribonucleoprotein complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13439.13439.4 11.93 11.93 2.203 4 3 3 0 856.6787 3183.7941 S451s S453s S455s Hydrogen 447 (K) RKREsEsEsDETPPAAPQLIKK (E) RKRES(0.99)ES(0.99)ES(0.99)DET(0.0)PPAAPQLIKK K:TMT10-Lys-Only,s:Phosphorylated S DKC1 58129.5 74 10 363.1 342.61 HUMAN 1 3.3349 21.5705 TAKTLYMSHRELPAW-p Q9BSJ8-2;S123-p TAKTLYMSHRELPAW 0.455652494519437 0.0793198158122066 -0.178 -0.198333333333333 6.29596306827434 14.6049571843404 -0.178 -0.198333333333333 0.234640887787457 0.0346341299056004 -1.33712040027914 -2.80291345850467 Q9BSJ8 ESYT1 Q9BSJ8.2.S123.p_ESYT1 Q9BSJ8-2_S123s _1_1_123_123 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27114.27114.3 13.36 13.36 2.171 4 1 1 0 981.8341 2863.5217 S123s TMT10 119 (K) TLYMsHRELPAWVSFPDVEK (A) T(0.0)LY(0.0)MS(0.99)HRELPAWVS(0.0)FPDVEK K:TMT10,s:Phosphorylated S ESYT1 124514 10 1 400.1 328.2 HUMAN 1 -6.296 -14.605 TAKVSPLTPKLFNSL-p Q7LBC6;T1270-p TAKVSPLTPKLFNSL 0.534530701567421 0.0261511575474901 0.0823333333333333 -0.351333333333333 5.03690560969508 21.5160275884486 0.0823333333333333 -0.351333333333333 0.313551901630989 0.00705337933602244 1.11081698446679 -4.20780197696839 Q7LBC6 KDM3B Q7LBC6.T1270.p_KDM3B Q7LBC6_T1270t _1_1_1270_1270 Q7LBC6 Q7LBC6 Lysine-specific demethylase 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14391.14391.2 8.79 5.9 1.652 2 1 1 0 640.3755 1199.7764 T1270t TMT10 1266 (K) VSPLtPK (L) VS(0.0)PLT(0.99)PK K:TMT10,t:Phosphorylated T KDM3B 193289 1 19 305.1 374.1 HUMAN 1 5.0369 -21.516 TALDGENSSGLQQLA-p Q92543;S568-p TALDGENSSGLQQLA 0.681706751621978 0.88919901789281 -0.0786666666666667 0.0163333333333333 3.12068056033384 0.716547679543472 -0.0786666666666667 0.0163333333333334 0.487452098030629 0.847901165132879 -0.744819081772701 0.201164547532962 Q92543 SNX19 Q92543.S568.p_SNX19 Q92543_S568s _1_1_568_568 Q92543 Q92543|Q92543-2 Sorting nexin-19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19209.19209.4 14.22 14.22 1.353 6 1 1 0 758.6197 2951.4809 S568s TMT10 559 (K) YETALDGENsSGLQQLAYHTVNRR (Y) Y(0.0)ET(0.0)ALDGENS(0.99)S(0.0)GLQQLAY(0.0)HT(0.0)VNRR s:Phosphorylated S SNX19 109794.3 1 2 2404.1 84.97 HUMAN 1 -3.1207 0.7165 TALIKRNSTIPTKQT-p A0A0G2JIW1;S419-p TALIKRNSTIPTKQT 0.0444873405743474 0.270403061650399 -0.562333333333333 -0.141 30.0647829650721 7.47928295191771 -0.562333333333333 -0.141 0.000985193875789481 0.17867825597757 -6.45185816177273 -1.54421908486001 A0A0G2JIW1 NotFound A0A0G2JIW1.S419.p_NotFound A0A0G2JIW1_S419s _1_1_419_419 A0A0G2JIW1 A0A0G2JIW1|P0DMV8|P34931|P0DMV8-2|V9GZ37 Heat shock 70 kDa protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6868.6868.2 9.44 9.44 1.114 3 1 1 0 727.9103 1374.8469 S419s TMT10 417 (K) RNsTIPTK (Q) RNS(0.99)T(0.0)IPT(0.0)K K:TMT10,s:Phosphorylated S HSPA1B 70393.3 3 3 367.3 341.38 HUMAN 1 -30.0648 -7.4793 TALKMEKSKDTYLLY-p Q9BSH4;S131-p TALKMEKSKDTYLLY 0.96776831271533 0.300162551304717 -0.00800000000000002 0.112 0.276625962383786 6.89898049332803 -0.00800000000000001 0.112 0.93829068268422 0.204221729909071 -0.0810827794763036 1.44292554409213 Q9BSH4 TACO1 Q9BSH4.S131.p_TACO1 Q9BSH4_S131s _1_1_131_131 Q9BSH4 Q9BSH4 Translational activator of cytochrome c oxidase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15979.15979.2 8.48 8.48 8.479 4 1 1 0 941.9892 1803.0053 S131s TMT10 131 (K) sKDTYLLYEGR (G) S(0.99)KDT(0.0)Y(0.0)LLY(0.0)EGR K:TMT10,s:Phosphorylated S TACO1 32932.9 2 1 6284.1 12.58 HUMAN 1 -0.2766 6.899 TALLLPPSPRPSPRV-p Q6W2J9;S336-p TALLLPPSPRPSPRV 0.525170023338528 0.22763538908225 0.0893333333333333 0.148333333333333 5.17351024046453 8.46739250090656 0.0893333333333333 0.148333333333333 0.303842818464389 0.142318300810797 1.13576177563011 1.71558254828233 Q6W2J9 BCOR Q6W2J9.S336.p_BCOR Q6W2J9_S336s _1_1_336_336 Q6W2J9 Q6W2J9|Q6W2J9-2|Q6W2J9-4|Q6W2J9-3 BCL-6 corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24216.24226.4 17.97 17.97 3.067 5 1 1 0 652.8566 2528.4398 S336s TMT10 320 (K) AVTSGLPGDTALLLPPsPRPSPR (V) AVT(0.0)S(0.0)GLPGDT(0.0)ALLLPPS(0.99)PRPS(0.0)PR s:Phosphorylated S BCOR 193725.6 1 1 459.1 305.76 HUMAN 1 5.1735 8.4674 TALQRSLSELESLKL-p P22059;S240-p TALQRSLSELESLKL 0.512647526186485 0.871975919592808 -0.093 -0.0173333333333333 5.36347759662514 0.838802277236183 -0.093 -0.0173333333333333 0.29083873052707 0.824365431994249 -1.17026983112082 -0.232917632327765 P22059 OSBP P22059.S240.p_OSBP P22059_S240s _1_1_240_240 P22059 P22059 Oxysterol-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26504.26504.3 17.91 17.91 2.259 4 1 1 0 881.1476 2561.4641 S240s TMT10 238 (R) SLsELESLKLPAESNEK (I) S(0.0)LS(0.99)ELES(0.0)LKLPAES(0.0)NEK K:TMT10,s:Phosphorylated S OSBP 90274.8 8 4 468.1 302.79 HUMAN 1 -5.3635 -0.8388 TALRRVVSGCRPKSA-p Q9H8M1;S15-p TALRRVVSGCRPKSA 0.10003796765691 0.00196310071997879 -0.387 -0.840333333333333 21.1580723217046 42.328800927728 -0.387 -0.840333333333334 0.00765936503365155 5.84951564985982e-05 -4.13201144738861 -11.2300870618503 Q9H8M1 COQ10B Q9H8M1.S15.p_COQ10B Q9H8M1_S15s _1_1_15_15 Q9H8M1 Q9H8M1|B8ZZX2 Coenzyme Q-binding protein COQ10 homolog B, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6462.6462.3 7.43 7.43 99 1 1 1 0 480.9312 1360.8135 S15s TMT10 13 (R) VVsGCRPK (S) VVS(1.0)GCRPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S COQ10B 27526.5 1 1 7157.1 7.43 HUMAN 1 -21.1581 -42.3288 TALSRALSQLAEVEE-p Q13596-3;S368-p TALSRALSQLAEVEE 0.443781954147912 0.00668151112418319 -0.133333333333333 0.522 6.50247898316527 31.2449723744648 -0.133333333333333 0.522 0.22374436255839 0.000750762829718032 -1.37361172797921 6.80864978857759 Q13596 SNX1 Q13596.3.S368.p_SNX1 Q13596-3_S368s _1_1_368_368 Q13596-3 Q13596-3|O60749|Q13596-2|O60749-2|H0YK42 Isoform 3 of Sorting nexin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23532.23532.3 8.01 8.01 99 1 1 1 0 585.65 1674.9678 S368s TMT10 366 (R) ALsQLAEVEEK (I) ALS(1.0)QLAEVEEK K:TMT10,s:Phosphorylated S SNX1 63252.3 1 11 1560.1 131.56 HUMAN 1 -6.5025 31.245 TALYKSLSVPAASTA-p P49815-4;S1254-p TALYKSLSVPAASTA 0.233633579555616 0.276954485712459 0.182333333333333 0.122666666666667 12.1030241751042 7.34668994339202 0.182333333333333 0.122666666666667 0.0616165790289405 0.18421755150619 2.35062160913665 1.52113198946264 P49815 TSC2 P49815.4.S1254.p_TSC2 P49815-4_S1254s _1_1_1254_1254 P49815-4 P49815|P49815-4|P49815-2|P49815-3|H3BMQ0|P49815-5 Isoform 4 of Tuberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18924.18924.3 10.51 10.51 2.263 4 1 1 0 743.0912 2147.2952 S1254s TMT10 1252 (K) SLsVPAASTAKPPPLPR (S) S(0.0)LS(0.99)VPAAS(0.0)T(0.0)AKPPPLPR K:TMT10,s:Phosphorylated S TSC2 200147.7 1 13 214.1 435.34 HUMAN 1 12.103 7.3467 TALYRTGSGIGNLQR-p A0A0D9SF60;S447-p TALYRTGSGIGNLQR 0.522425681868064 0.929892197726816 -0.116 -0.00899999999999999 5.21378342229088 0.445745475555042 -0.116 -0.00899999999999999 0.301038234125705 0.902454785924897 -1.14309464263551 -0.128407800500577 A0A0D9SF60 NotFound A0A0D9SF60.S447.p_NotFound A0A0D9SF60_S447s _1_1_447_447 A0A0D9SF60 A0A0D9SF60 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9242.9242.2 11.85 11.85 2.078 2 1 1 0 656.3348 1231.6956 S447s TMT10 445 (R) TGsGIGNLQR (T) T(0.0)GS(0.99)GIGNLQR s:Phosphorylated S PKP4 134765 1 1 122.2 546.31 HUMAN 1 -5.2138 -0.4457 TALYRTGSVGIGNLQ-p Q99569;S447-p TALYRTGSVGIGNLQ 0.438644538660338 0.628145385991348 -0.114666666666667 -0.0623333333333333 6.59074423855033 2.74597639576654 -0.114666666666667 -0.0623333333333333 0.219242919257472 0.531376520182425 -1.38916728180151 -0.668238141024716 Q99569 PKP4 Q99569.S447.p_PKP4 Q99569_S447s _1_1_447_447 Q99569 Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13365.13365.2 11.64 11.64 2.376 2 1 1 0 705.87 1330.764 S447s TMT10 445 (R) TGsVGIGNLQR (T) T(0.0)GS(0.99)VGIGNLQR s:Phosphorylated S PKP4 132664.7 3 16 122.1 546.31 HUMAN 1 -6.5907 -2.746 TAMKGFGSDKEAILD-p P08133;S38-p TAMKGFGSDKEAILD 0.307433256565227 0.703953959582358 0.187333333333333 -0.0646666666666666 9.57279966106826 2.09485683714362 0.187333333333333 -0.0646666666666666 0.11033671096351 0.617325641363329 1.90757690966631 -0.529645196373712 P08133 ANXA6 P08133.S38.p_ANXA6 P08133_S38s _1_1_38_38 P08133 P08133|P08133-2|E5RK69|E7EMC6|E5RI05|E5RIU8 Annexin A6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.33125.33125.3 16.55 16.55 6.12 3 1 1 0 754.072 2180.2327 S38s TMT10 35 (K) GFGsDKEAILDIITSR (S) GFGS(0.99)DKEAILDIIT(0.0)S(0.0)R K:TMT10,s:Phosphorylated S ANXA6 76214.3 1 2 1878.1 109.53 HUMAN 1 9.5728 -2.0949 TANKNHETDGGSAHG-p P49792;T1156-p TANKNHETDGGSAHG 0.105183872043084 0.806275865734098 0.310666666666667 -0.0366666666666666 20.5824527735453 1.30882836936585 0.310666666666667 -0.0366666666666667 0.00874489748427441 0.739804831150085 4.0050810598087 -0.349610205482097 P49792 RANBP2 P49792.T1156.p_RANBP2 P49792_T1156tS1160s_2_2_1156_1160 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22693.22693.5 13.17 13.17 99 2 2 2 0 878.011 4226.0881 T1156t S1160s TMT10 1153 (K) NHEtDGGsAHGDDDDDGPHFEPVVPLPDKIEVK (T) NHET(1.0)DGGS(1.0)AHGDDDDDGPHFEPVVPLPDKIEVK K:TMT10,t:Phosphorylated T,s:Phosphorylated S RANBP2 362585.9 1 73 9.1 1298.62 HUMAN 1 20.5825 -1.3088 TANQRFSSPAPSSDG-p Q96QT6;S691-p TANQRFSSPAPSSDG 0.451712086772319 0.313293307175524 -0.242333333333333 0.113666666666667 6.37236516730323 6.66314492338342 -0.242333333333333 0.113666666666667 0.230549127645345 0.215618245413836 -1.35063690134525 1.40154114768999 Q96QT6 PHF12 Q96QT6.S691.p_PHF12 Q96QT6_S691s _1_1_691_691 Q96QT6 Q96QT6|Q96QT6-3|Q96QT6-5|Q96QT6-4 PHD finger protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11052.11052.2 13.41 13.41 1.16 4 1 1 0 809.399 1537.8262 S691s TMT10 689 (R) FSsPAPSSDGK (V) FS(0.0)S(0.99)PAPS(0.0)S(0.0)DGK K:TMT10,s:Phosphorylated S PHF12 111750.5 3 10 626.1 258.17 HUMAN 1 -6.3724 6.6631 TAPAAAVSPMQRHST-p Q5M775;S863-p TAPAAAVSPMQRHST 0.844396662154091 0.00413791477536262 0.036 -0.731666666666667 1.42150717029611 35.081178821928 0.036 -0.731666666666667 0.720857270337605 0.000310371702014036 0.376505160644265 -8.12414644049374 Q5M775 SPECC1 Q5M775.S863.p_SPECC1 Q5M775_S863s _1_1_863_863 Q5M775 Q5M775|Q5M775-4 Cytospin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9415.9415.3 14.75 14.75 14.749 2 1 1 0 503.588 1428.7831 S863s TMT10 856 (R) TAPAAAVsPMQR (H) T(0.0)APAAAVS(0.99)PMQR s:Phosphorylated S SPECC1 119267.5 3 20 330.1 358.68 HUMAN 1 1.4215 -35.0812 TAPEAALYGRFTIKS-p J3QRU1;Y451-p TAPEAALYGRFTIKS 0.332581907339084 0.0124234932058706 -0.155666666666667 0.418 8.92561800521802 26.5953601916308 -0.155666666666667 0.418 0.128067284059416 0.00219010017978559 -1.79548690122394 5.4521371870219 J3QRU1 NotFound J3QRU1.Y451.p_NotFound J3QRU1_Y451y _1_1_451_451 J3QRU1 J3QRU1 Tyrosine-protein kinase GG20160819_MSz_CCLE_T4D7_pY_Injection_02.21923.21970.2 14.62 14.62 4.023 2 1 1 0 772.3825 1463.7844 Y451y TMT10 443 (K) WTAPEAALyGR (F) WT(0.0)APEAALY(0.99)GR y:Phosphorylated Y YES1 61899.4 1 6 4.1 124.38 HUMAN 1 -8.9256 26.5954 TAPGAEASPSPCITE-p Q66PJ3;S239-p TAPGAEASPSPCITE 0.810596399754461 0.169749383913678 0.0396666666666667 0.155 1.75210398082904 10.1281434419617 0.0396666666666667 0.155 0.668020210433468 0.0970924937579419 0.453175890520387 2.00316062666759 Q66PJ3 ARL6IP4 Q66PJ3.S239.p_ARL6IP4 Q66PJ3_S239s _1_1_239_239 Q66PJ3 Q66PJ3 ADP-ribosylation factor-like protein 6-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10158.10158.3 21.4 21.4 2.565 5 1 1 0 704.3272 2031.0014 S239s TMT10 230 (K) ASTAPGAEAsPSPCITER (S) AS(0.0)T(0.0)APGAEAS(0.99)PS(0.0)PCIT(0.0)ER C:Carbamidomethylation,s:Phosphorylated S ARL6IP4 45314 4 2 1859.1 110.77 HUMAN 1 1.7521 10.1281 TAPGGRLSKDFCARE-p A1L188;S47-p TAPGGRLSKDFCARE 0.844605466455093 0.460671499723104 -0.033 -0.0886666666666666 1.41683620233112 4.48859988900096 -0.033 -0.0886666666666666 0.721632991125267 0.355745988133585 -0.375399513089313 -1.00926082478588 A1L188 C17orf89 A1L188.S47.p_C17orf89 A1L188_S47s _1_1_47_47 A1L188 A1L188 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9007.9007.3 15.26 15.26 2.392 3 1 1 0 657.3484 1890.0631 S47s TMT10 35 (R) CVQASTAPGGRLsK (D) CVQAS(0.0)T(0.0)APGGRLS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NDUFAF8 8041 2 1 5928.1 15.26 HUMAN 1 -1.4168 -4.4886 TAPLSPMSPPGYKLV-p P17302;S282-p TAPLSPMSPPGYKLV 0.953892061883456 0.803586709210602 0.00933333333333333 -0.0313333333333333 0.401107788278596 1.32905360762428 0.00933333333333332 -0.0313333333333333 0.911778235416314 0.7363675454704 0.116076341293304 -0.354459807837731 P17302 GJA1 P17302.S282.p_GJA1 P17302_S282s _1_1_282_282 P17302 P17302 Gap junction alpha-1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26046.26046.3 17.59 17.59 1.161 8 1 1 0 1010.8057 2950.452 S282s TMT10 265 (K) YAYFNGCSSPTAPLSPMsPPGYK (L) Y(0.0)AY(0.0)FNGCS(0.0)S(0.0)PT(0.0)APLS(0.0)PMS(0.99)PPGY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GJA1 43521.1 1 3 1330.1 153.26 HUMAN 1 0.4011 -1.3291 TAPTEGKSPLKKEDR-p Q96T37;S741-p TAPTEGKSPLKKEDR 0.167247233071749 0.117126473043593 -0.718666666666667 -0.182 15.5352914203512 12.2811243397325 -0.718666666666667 -0.182 0.0279557313269481 0.0591408505321869 -2.97946143544466 -2.38107879489601 Q96T37 RBM15 Q96T37.S741.p_RBM15 Q96T37_S741s _1_1_741_741 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10609.10609.2 13.64 13.64 2.213 4 1 1 0 999.0669 1917.1624 S741s TMT10 733 (R) TTAPTEGKsPLK (K) T(0.0)T(0.0)APT(0.0)EGKS(0.99)PLK K:TMT10,s:Phosphorylated S RBM15 107414.9 8 26 55.1 724.11 HUMAN 1 -15.5353 -12.2811 TAPVASASPKLCLAW-p Q96T37;S781-p TAPVASASPKLCLAW 0.932495418439431 0.0358857498654278 -0.0126666666666667 0.261 0.598494903151932 19.4545747235455 -0.0126666666666667 0.261 0.871265484588839 0.011338158599123 -0.169892934495593 3.75946556385538 Q96T37 RBM15 Q96T37.S781.p_RBM15 Q96T37_S781s _1_1_781_781 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8379.8379.3 18.64 14.38 1.102 5 1 1 0 860.7927 2500.3974 S781s TMT10 765 (K) SPSQKQDGGTAPVASAsPK (L) S(0.0)PS(0.0)QKQDGGT(0.0)APVAS(0.0)AS(0.99)PK K:TMT10,s:Phosphorylated S RBM15 107414.9 7 29 55.1 724.11 HUMAN 1 -0.5985 19.4546 TAQPVKRSLGKVPKW-p Q9BZE9-2;S632-p TAQPVKRSLGKVPKW 0.769995010044579 0.242759662291514 -0.150333333333333 -0.637666666666667 2.17449740745145 8.10045348535232 -0.150333333333333 -0.637666666666666 0.606108339090101 0.154865490168822 -0.547108109819319 -1.65205165800583 Q9BZE9 ASPSCR1 Q9BZE9.2.S632.p_ASPSCR1 Q9BZE9-2_S632s _1_1_632_632 Q9BZE9-2 Q9BZE9-2|Q9BZE9-3 Isoform 2 of Tether containing UBX domain for GLUT4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9463.9463.3 7.86 4.96 99 1 1 1 0 422.9246 1186.7924 S632s Hydrogen 632 (R) sLGKVPK (W) S(1.0)LGKVPK K:TMT10-Lys-Only,s:Phosphorylated S ASPSCR1 70673.5 1 5 1375.1 148.73 HUMAN 1 -2.1745 -8.1005 TAQQLKRSAGVPFHA-p A0A0C4DFX9;S203-p TAQQLKRSAGVPFHA 0.329464391945973 0.074145857917284 -0.551333333333333 -0.279333333333333 9.0141796944026 14.9969264875973 -0.551333333333333 -0.279333333333333 0.12548217291451 0.0316451640369646 -1.81081751853701 -2.87599851529296 A0A0C4DFX9 NELFA A0A0C4DFX9.S203.p_NELFA A0A0C4DFX9_S203s _1_1_203_203 A0A0C4DFX9 A0A0C4DFX9|Q9H3P2 Negative elongation factor A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12297.12297.3 14.78 8.85 99 1 1 1 0 484.5983 1371.8149 S203s TMT10 203 (R) sAGVPFHAK (G) S(1.0)AGVPFHAK K:TMT10,s:Phosphorylated S NELFA 58726.5 1 2 1015.1 188.17 HUMAN 1 -9.0142 -14.9969 TAQQNGDTPEAQGLD-p Q15003;T605-p TAQQNGDTPEAQGLD 0.94334244449815 0.776177727972339 -0.0106666666666667 -0.036 0.498651603979411 1.52258265905226 -0.0106666666666667 -0.036 0.891527696381574 0.70427412722048 -0.142915803516641 -0.400229130235258 Q15003 NCAPH Q15003.T605.p_NCAPH Q15003_T605t _1_1_605_605 Q15003 Q15003|E9PHA2|Q15003-2 Condensin complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23381.23381.3 24.18 21.54 5.291 6 1 1 0 1238.6057 3633.8284 T605t TMT10 598 (K) TAQQNGDtPEAQGLDITTYGESNLVAEPQK (V) T(0.0)AQQNGDT(0.99)PEAQGLDIT(0.0)T(0.0)Y(0.0)GES(0.0)NLVAEPQK K:TMT10,t:Phosphorylated T NCAPH 83360.5 6 15 558.1 272.98 HUMAN 1 -0.4987 -1.5226 TAQRATTTYDFDCDN-p Q6P0N0;T523-p TAQRATTTYDFDCDN 0.143638422086766 0.84629558466175 0.284333333333333 0.0286666666666667 17.2077275712316 1.01863167988063 0.284333333333333 0.0286666666666667 0.019020732719345 0.790927784269029 3.30366115365661 0.278517978463178 Q6P0N0 MIS18BP1 Q6P0N0.T523.p_MIS18BP1 Q6P0N0_T523t _1_1_523_523 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23093.23093.3 14.19 10.16 1.12 4 1 1 0 782.0331 2264.1157 T523t TMT10 520 (R) ATTtYDFDCDNLELK (S) AT(0.0)T(0.0)T(0.99)Y(0.0)DFDCDNLELK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MIS18BP1 129996 1 17 54.1 728.39 HUMAN 1 17.2077 1.0186 TAQRSLLSPLHRSGS-p Q9BY84;S501-p TAQRSLLSPLHRSGS 0.0144292492620541 0.00966951664633605 -0.966666666666667 -1.15566666666667 44.3398848184041 28.3914908537426 -0.966666666666667 -1.15566666666667 3.68138737120252e-05 0.00144827460194612 -12.2993846049872 -5.9485025152767 Q9BY84 DUSP16 Q9BY84.S501.p_DUSP16 Q9BY84_S501s _1_1_501_501 Q9BY84 Q9BY84 Dual specificity protein phosphatase 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15690.15690.3 13.37 13.37 13.372 2 1 1 0 411.2306 1151.7098 S501s TMT10 498 (R) SLLsPLHR (S) S(0.0)LLS(0.99)PLHR s:Phosphorylated S DUSP16 74070.3 2 3 2648.1 75.22 HUMAN 1 -44.3399 -28.3915 TAQSPTPSVEADSPD-p Q96HH9;S53-p TAQSPTPSVEADSPD 0.196612231479941 0.00493909262777022 -0.239666666666667 -0.585 13.765462828251 33.6412669727645 -0.239666666666667 -0.585 0.0420197744757289 0.000432387671633294 -2.64995717414298 -7.60715917047728 Q96HH9 GRAMD3 Q96HH9.S53.p_GRAMD3 Q96HH9_S53s _1_1_53_53 Q96HH9 Q96HH9-3|Q96HH9-4|E9PD09|D6RFH3|D6R9P9 GRAM domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10608.10608.3 13.07 12.66 1.208 6 1 1 0 946.4888 2757.4874 S53s TMT10 44 (R) SPTAQSPTPsVEADSPDQKK (I) S(0.0)PT(0.0)AQS(0.0)PT(0.0)PS(0.99)VEADS(0.0)PDQKK K:TMT10,s:Phosphorylated S GRAMD2B 48324.7 4 4 735.1 235.43 HUMAN 1 -13.7655 -33.6413 TAQTIKKSVEEGKID-p Q96A49;S86-p TAQTIKKSVEEGKID 0.334837228172211 0.00853227125776186 -0.411 0.429333333333333 8.86877746321179 29.3605396955126 -0.411 0.429333333333333 0.129754447769844 0.00115863336443784 -1.78564782768516 6.23030183686506 Q96A49 SYAP1 Q96A49.S86.p_SYAP1 Q96A49_S86s _1_1_86_86 Q96A49 Q96A49 Synapse-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20660.20660.3 12.55 7.59 99 1 1 1 0 724.0721 2090.2312 S86s TMT10 86 (K) sVEEGKIDGIIDK (T) S(1.0)VEEGKIDGIIDK K:TMT10,s:Phosphorylated S SYAP1 39989.7 2 2 877.1 208.41 HUMAN 1 -8.8688 29.3605 TAQWKALSMNTENAK-p Q9Y6M7-13;S1095-p TAQWKALSMNTENAK 0.393905092397654 0.160186951216711 0.154666666666667 -0.178 7.46460400889095 10.4619320422665 0.154666666666667 -0.178 0.179283201591442 0.0899097511781506 1.54211928007936 -2.06121342193928 Q9Y6M7 SLC4A7 Q9Y6M7.13.S1095.p_SLC4A7 Q9Y6M7-13_S1095s _1_1_1095_1095 Q9Y6M7-13 Q9Y6M7-7|Q9Y6M7-8|Q9Y6M7-13|Q9Y6M7-6|Q9Y6M7-3 Isoform 13 of Sodium bicarbonate cotransporter 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13133.13133.2 11.86 5.57 2.184 2 1 1 0 808.9077 1536.8456 S1095s TMT10 1093 (K) ALsMNTENAK (V) ALS(0.99)MNT(0.0)ENAK K:TMT10,s:Phosphorylated S SLC4A7 128884.6 1 16 207.1 445.25 HUMAN 1 7.4646 -10.4619 TARGIVVYTGDRTVM-p P05023-4;Y260-p TARGIVVYTGDRTVM 0.741700327124498 0.813861572663139 -0.09 0.0606666666666667 2.46381369732249 1.2522336533499 -0.09 0.0606666666666667 0.567046442670539 0.749508624639502 -0.60923195558614 0.335970068912724 P05023 ATP1A1 P05023.4.Y260.p_ATP1A1 P05023-4_Y260y _1_1_260_260 P05023-4 P05023|P05023-4|P05023-3|P05023-2 Isoform 4 of Sodium/potassium-transporting ATPase subunit alpha-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.14331.14463.2 19.2 10.69 2.566 2 1 1 0 644.8294 1208.6837 Y260y TMT10 256 (R) GIVVyTGDR (T) GIVVY(0.99)T(0.0)GDR y:Phosphorylated Y ATP1A1 114310.4 2 3 14.1 89.11 HUMAN 1 -2.4638 1.2522 TARKRKPSPEPEGEV-p Q7Z5L9;S360-p TARKRKPSPEPEGEV 0.912869099045042 0.204126903895323 -0.018 -0.193666666666667 0.77242895532268 9.07912762924165 -0.018 -0.193666666666667 0.837060993324431 0.123619572411866 -0.215778301451218 -1.82139975777615 Q7Z5L9 IRF2BP2 Q7Z5L9.S360.p_IRF2BP2 Q7Z5L9_S360s_1_1_360_360 Q7Z5L9 Q7Z5L9|Q7Z5L9-2 Interferon regulatory factor 2-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21036.21036.5 23.65 20.56 14.47 5 1 1 0 883.48 4332.401 S360s N373n TMT10 357 (K) RKPsPEPEGEVGPPKInGEAQPWLSTSTEGLK (I) RKPS(0.99)PEPEGEVGPPKIN(1.0)GEAQPWLS(0.0)T(0.0)S(0.0)T(0.0)EGLK K:TMT10,s:Phosphorylated S,n:Deamidated IRF2BP2 61765.3 25 8 154.1 504.92 HUMAN 1 -0.7724 -9.0791 TARPGGGTPLLNGAG-p P51798;T34-p TARPGGGTPLLNGAG 0.441027182521617 0.0575400635754663 0.172333333333333 -0.255333333333333 6.54812075839984 16.5195564610044 0.172333333333333 -0.255333333333333 0.221405254806704 0.0222866274791654 1.38165838798196 -3.1662693041532 P51798 CLCN7 P51798.T34.p_CLCN7 P51798_T34t _1_1_34_34 P51798 H0Y2M6|P51798|P51798-2 H(+)/Cl(-) exchange transporter 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10437.10437.3 14.74 9.59 2.655 2 1 1 0 700.7024 2020.1249 T34t TMT10 27 (R) TARPGGGtPLLNGAGPGAAR (Q) T(0.0)ARPGGGT(0.99)PLLNGAGPGAAR t:Phosphorylated T CLCN7 89191 1 2 2487.1 81.4 HUMAN 1 6.5481 -16.5196 TARPSESSEEFLEEE-p Q9Y6X4;S379-p TARPSESSEEFLEEE 0.402736009061482 0.810901889351957 0.136 -0.0236666666666667 7.29227347748525 1.27630653940581 0.136 -0.0236666666666667 0.186540292001379 0.745365601153468 1.5120833656275 -0.341784675602657 Q9Y6X4 FAM169A Q9Y6X4.S379.p_FAM169A Q9Y6X4_S378sS379s_2_2_378_379 Q9Y6X4 Q9Y6X4|D6RB01 Soluble lamin-associated protein of 75 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17755.17755.4 13.72 13.72 1.176 5 2 2 0 742.8248 2808.3373 S378s S379s TMT10 369 (K) LESTARPSEssEEFLEEEPEQR (G) LES(0.0)T(0.0)ARPS(0.0)ES(0.99)S(0.99)EEFLEEEPEQR s:Phosphorylated S FAM169A 75295.8 4 13 731.1 236 HUMAN 1 7.2923 -1.2763 TARREDPSFERYPKN-p Q9NWH9;S815-p TARREDPSFERYPKN 0.690516196915719 0.0334733135328065 0.06 -0.269666666666667 3.01491315204477 19.8880527747702 0.06 -0.269666666666667 0.499469168233436 0.0102611189597009 0.723439703151675 -3.85138819512082 Q9NWH9 SLTM Q9NWH9.S815.p_SLTM Q9NWH9_S815s _1_1_815_815 Q9NWH9 Q9NWH9|Q9NWH9-3 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8506.8506.4 10.76 4.05 6.658 2 1 1 0 491.2525 1882.0223 S815s TMT10 811 (R) REDPsFERYPK (N) REDPS(0.99)FERY(0.0)PK K:TMT10,s:Phosphorylated S SLTM 117431.6 3 15 167.1 494.15 HUMAN 1 3.0149 -19.8881 TARSLNKSLQNLSLT-p Q8N122;S738-p TARSLNKSLQNLSLT 0.175206292263787 0.0727112126621179 0.222333333333333 0.226333333333333 15.0586147057432 15.1280656649783 0.222333333333333 0.226333333333333 0.03119884593048 0.0307038922633957 2.88945165608772 2.90059207096032 Q8N122 RPTOR Q8N122.S738.p_RPTOR Q8N122_S738s _1_1_738_738 Q8N122 Q8N122|Q8N122-3 Regulatory-associated protein of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31754.31754.5 23.47 22.9 2.854 16 1 1 0 1113.5508 5483.723 S738s TMT10 738 (K) sLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILSFETIDK (M) S(0.99)LQNLS(0.0)LT(0.0)EES(0.0)GGAVAFS(0.0)PGNLS(0.0)T(0.0)S(0.0)S(0.0)S(0.0)AS(0.0)S(0.0)T(0.0)LGS(0.0)PENEEHILS(0.0)FET(0.0)IDK K:TMT10,s:Phosphorylated S RPTOR 150746.6 4 4 1778.1 115.46 HUMAN 1 15.0586 15.1281 TASAGNDSEPNLIDC-p Q8IY22;S424-p TASAGNDSEPNLIDC 0.450118444429121 0.156795614180223 0.131333333333333 0.156666666666667 6.40358994016903 10.5807364379045 0.131333333333333 0.156666666666667 0.228897477132039 0.0874835415850454 1.35615536362228 2.08191243080801 Q8IY22 CMIP Q8IY22.S424.p_CMIP Q8IY22_S424s _1_1_424_424 Q8IY22 Q8IY22|Q8IY22-2|A0A087WY48|Q8IY22-3|A0A087WU05 C-Maf-inducing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32930.32930.4 33.57 27.51 4.616 10 1 1 0 1254.6038 4935.4248 S424s TMT10 409 (R) TSTAKPALTASAGNDsEPNLIDCLMVSPACSTMSIELGPQADR (T) T(0.0)S(0.0)T(0.0)AKPALT(0.0)AS(0.0)AGNDS(0.99)EPNLIDCLMVS(0.0)PACS(0.0)T(0.0)MS(0.0)IELGPQADR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CMIP 87755.5 6 3 2381.1 85.8 HUMAN 1 6.4036 10.5807 TASAGPPS_______-p Q9H3Y8;S114-p TASAGPPS_______ 0.175358480804402 0.157195410713329 0.293 -0.177 15.0471527587143 10.5680228990572 0.293 -0.177 0.0312812950151483 0.0877400161674299 2.88729939907072 -2.07969638992297 Q9H3Y8 PPDPF Q9H3Y8.S114.p_PPDPF Q9H3Y8_S114s _1_1_114_114 Q9H3Y8 X6R7I6|Q9H3Y8 Pancreatic progenitor cell differentiation and proliferation factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5884.5884.3 20.17 20.17 10.538 5 1 1 0 665.6686 1915.0285 S114s TMT10 99 (R) KQPGGQSSTASAGPPs (-) KQPGGQS(0.0)S(0.0)T(0.0)AS(0.0)AGPPS(0.99) K:TMT10,s:Phosphorylated S PPDPF 11948 2 3 3152.1 59.15 HUMAN 1 15.0472 -10.568 TASFDPPSDMDSEAE-p Q13439-5;S140-p TASFDPPSDMDSEAE 0.353684375195394 0.0148547597897007 0.145 0.368333333333333 8.38675833129018 25.3062491209221 0.145 0.368333333333333 0.144985365213518 0.00294696574628587 1.70219545800006 5.11527409172628 Q13439 GOLGA4 Q13439.5.S140.p_GOLGA4 Q13439-5_S140s_1_1_140_140 Q13439-5 Q13439-5|Q13439-4|Q13439-3|Q86W71 Isoform 5 of Golgin subfamily A member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28872.28872.3 10.23 4.25 1.283 8 1 1 0 1227.8674 3600.622 S140s N152n Hydrogen 127 (R) LDLDSSTASFDPPsDMDSEAEDLVGnSDSLNK (E) LDLDS(0.0)S(0.0)T(0.0)AS(0.0)FDPPS(0.99)DMDS(0.0)EAEDLVGN(0.99)S(0.0)DS(0.0)LN(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated GOLGA4 263236.4 5 8 575.1 268.28 HUMAN 1 8.3868 25.3062 TASGIMGSPKPAIKS-p Q7L590;S548-p TASGIMGSPKPAIKS 0.256626955344017 0.000952253650599092 -0.178333333333333 -1.61333333333333 11.2194539186342 54.9077109932551 -0.178333333333333 -1.61333333333333 0.0755187178841915 3.23019619092632e-06 -2.19460128439348 -19.3910068878759 Q7L590 MCM10 Q7L590.S548.p_MCM10 Q7L590_S548s _1_1_548_548 Q7L590 Q7L590|Q7L590-2|Q5T670 Protein MCM10 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16635.16635.4 13.53 13.53 2.382 3 1 1 0 549.8169 2116.2767 S548s TMT10 540 (K) ATASGIMGsPKPAIK (S) AT(0.0)AS(0.0)GIMGS(0.99)PKPAIK K:TMT10,s:Phosphorylated S MCM10 99322.4 1 7 1720.1 119.54 HUMAN 1 -11.2195 -54.9077 TASKGTHSPPLTPEV-p O75808;S1070-p TASKGTHSPPLTPEV 0.293955747591478 0.627999732199763 0.192 -0.0606666666666667 10.031659207797 2.74767052637991 0.192 -0.0606666666666667 0.0992736704166293 0.531169277008115 1.98721128969781 -0.66858879200799 O75808 CAPN15 O75808.S1070.p_CAPN15 O75808_S1070s _1_1_1070_1070 O75808 O75808 Calpain-15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16659.16659.3 15.08 15.08 1.151 3 1 1 0 781.4073 2262.2556 S1070s TMT10 1067 (K) GTHsPPLTPEVAGLHGPRPL (-) GT(0.0)HS(0.99)PPLT(0.0)PEVAGLHGPRPL s:Phosphorylated S CAPN15 119936.5 2 3 2788.1 70.56 HUMAN 1 10.0317 -2.7477 TASLSGNSPKTGTSE-p Q9NZM3;S230-p TASLSGNSPKTGTSE 0.396320278249166 0.774528969158221 0.120666666666667 0.029 7.41871422027551 1.53460732526851 0.120666666666667 0.029 0.181187644047985 0.702326842939301 1.5341259805153 0.403036420131971 Q9NZM3 ITSN2 Q9NZM3.S230.p_ITSN2 Q9NZM3_S230s _1_1_230_230 Q9NZM3 Q9NZM3|A0A087WVF7|Q9NZM3-2|Q9NZM3-3|Q9NZM3-4 Intersectin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24412.24412.4 24.04 22.33 1.187 16 1 1 0 1083.5499 4251.1781 S230s TMT10 208 (K) AQSLIDLGSSSSTSSTASLSGNsPKTGTSEWAVPQPTR (L) AQS(0.0)LIDLGS(0.0)S(0.0)S(0.0)S(0.0)T(0.0)S(0.0)S(0.0)T(0.0)AS(0.0)LS(0.0)GNS(0.99)PKT(0.0)GT(0.0)S(0.0)EWAVPQPT(0.0)R K:TMT10,s:Phosphorylated S ITSN2 194542 4 3 1476.1 139.1 HUMAN 1 7.4187 1.5346 TASPWNLSPFSKTSI-p P23771-2;S115-p TASPWNLSPFSKTSI 0.819005934462948 0.0102907900139851 0.0586666666666667 -0.451 1.67059564677073 27.9033585327682 0.0586666666666667 -0.451 0.680675995715232 0.00162055638657122 0.434550943914109 -5.81035196772812 P23771 GATA3 P23771.2.S115.p_GATA3 P23771-2_S115s _1_1_115_115 P23771-2 P23771-2 Isoform 2 of Trans-acting T-cell-specific transcription factor GATA-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20330.20330.4 11.28 11.28 3.195 5 1 1 0 619.5719 2395.2923 S115s TMT10 102 (K) ALGSHHTASPWNLsPFSK (T) ALGS(0.0)HHT(0.0)AS(0.0)PWNLS(0.99)PFS(0.0)K K:TMT10,s:Phosphorylated S GATA3 48728.8 1 1 2536.1 79.45 HUMAN 1 1.6706 -27.9034 TASQSQRSPISDNSG-p Q99590;S338-p TASQSQRSPISDNSG 0.422575818487108 0.703209805508419 0.127333333333333 0.0516666666666667 6.89305559270926 2.10233658185409 0.127333333333333 0.0516666666666667 0.204500531333433 0.61626335196622 1.44227986849164 0.531284938543075 Q99590 SCAF11 Q99590.S338.p_SCAF11 Q99590_S338s _1_1_338_338 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13509.13509.5 26.65 26.65 1.132 12 1 1 0 878.2075 4307.037 S338s TMT10 329 (R) AETASQSQRsPISDNSGCDAPGNSNPSLSVPSSAESEK (Q) AET(0.0)AS(0.0)QS(0.0)QRS(0.99)PIS(0.0)DNS(0.0)GCDAPGNS(0.0)NPS(0.0)LS(0.0)VPS(0.0)S(0.0)AES(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SCAF11 166418 9 2 120.1 549.85 HUMAN 1 6.8931 2.1023 TASSEPVSPLQEKLS-p A7KAX9;S856-p TASSEPVSPLQEKLS 0.378820007640966 0.33044071419133 -0.121666666666667 -0.137333333333333 7.78898769179681 6.36772550697501 -0.121666666666667 -0.137333333333333 0.166380042470472 0.230795559793295 -1.59853296204392 -1.34947695115346 A7KAX9 ARHGAP32 A7KAX9.S856.p_ARHGAP32 A7KAX9_S856s _1_1_856_856 A7KAX9 A7KAX9|A7KAX9-2 Rho GTPase-activating protein 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13952.13952.2 23.08 23.08 1.148 9 1 1 0 1658.7701 3236.5629 S856s TMT10 835 (K) DAETGSSQCQTPGSTASSEPVsPLQEK (L) DAET(0.0)GS(0.0)S(0.0)QCQT(0.0)PGS(0.0)T(0.0)AS(0.0)S(0.0)EPVS(0.99)PLQEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ARHGAP32 232236.5 3 13 159.1 497.4 HUMAN 1 -7.789 -6.3677 TASSKLKSPSQKQDG-p Q96T37;S765-p TASSKLKSPSQKQDG 0.17909935093331 0.0036155237814501 -0.224666666666667 -0.706333333333333 14.7500034659699 36.3111346045842 -0.224666666666667 -0.706333333333333 0.033496517183238 0.000233822629171978 -2.83169429526935 -8.58964701493075 Q96T37 RBM15 Q96T37.S765.p_RBM15 Q96T37_S765s _1_1_765_765 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8818.8818.4 16.95 14.96 1.168 5 1 1 0 645.8465 2500.3974 S765s TMT10 765 (K) sPSQKQDGGTAPVASASPK (L) S(0.99)PS(0.0)QKQDGGT(0.0)APVAS(0.0)AS(0.0)PK K:TMT10,s:Phosphorylated S RBM15 107414.9 10 27 55.1 724.11 HUMAN 1 -14.75 -36.3111 TASSQRVSPGLPSPN-p Q9UGP4;S272-p TASSQRVSPGLPSPN 0.530039241124765 0.849431020708895 0.089 -0.0263333333333333 5.10167769799844 0.995988147329318 0.089 -0.0263333333333333 0.308910186883882 0.795062344948344 1.12265884623904 -0.272844934269745 Q9UGP4 LIMD1 Q9UGP4.S272.p_LIMD1 Q9UGP4_S272s _1_1_272_272 Q9UGP4 Q9UGP4|C9JRJ5 LIM domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22058.22058.4 28.81 26.81 1.13 9 1 1 0 1124.3354 4414.3519 S272s TMT10 255 (R) SSEKPTGLWSTASSQRVsPGLPSPNLENGAPAVGPVQPR (T) S(0.0)S(0.0)EKPT(0.0)GLWS(0.0)T(0.0)AS(0.0)S(0.0)QRVS(0.99)PGLPS(0.0)PNLENGAPAVGPVQPR K:TMT10,s:Phosphorylated S LIMD1 73900.6 8 4 1009.1 188.97 HUMAN 1 5.1017 -0.996 TASSVAFTPLQGLEI-p Q8WWY3;T455-p TASSVAFTPLQGLEI 0.476938518658867 0.0729326919387294 -0.0953333333333333 -0.294333333333333 5.91647002027458 15.1027903589154 -0.0953333333333333 -0.294333333333333 0.256066637105154 0.0308831054341243 -1.26966910046202 -2.89584634878492 Q8WWY3 PRPF31 Q8WWY3.T455.p_PRPF31 Q8WWY3_T455t _1_1_455_455 Q8WWY3 Q8WWY3|E7EVX8 U4/U6 small nuclear ribonucleoprotein Prp31 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30774.30774.3 22.44 22.44 5.839 6 1 1 0 1047.5476 3060.6618 T455t TMT10 445 (R) SSGTASSVAFtPLQGLEIVNPQAAEK (K) S(0.0)S(0.0)GT(0.0)AS(0.0)S(0.0)VAFT(0.99)PLQGLEIVNPQAAEK K:TMT10,t:Phosphorylated T PRPF31 55683.3 2 4 3302.1 54.41 HUMAN 1 -5.9165 -15.1028 TATEGPGSPRDAEDH-p Q8NC74;S645-p TATEGPGSPRDAEDH 0.417812171186908 0.101528951981958 0.129333333333333 0.261 6.9952456959465 13.1273101587383 0.129333333333333 0.261 0.199744776247062 0.0486708559607214 1.46018097100795 2.53262718402312 Q8NC74 RBBP8NL Q8NC74.S645.p_RBBP8NL Q8NC74_S645s _1_1_645_645 Q8NC74 Q8NC74 RBBP8 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8622.8622.2 13.43 8.36 4.003 3 1 1 0 697.8478 1314.7215 S645s TMT10 637 (K) LTATEGPGsPR (D) LT(0.0)AT(0.0)EGPGS(0.99)PR s:Phosphorylated S RBBP8NL 71886.7 9 15 565.1 270.89 HUMAN 1 6.9952 13.1273 TATESFASDPILYRP-p P14618;S100-p TATESFASDPILYRP 0.358160899463675 0.145840718718439 -0.158666666666667 0.176 8.28417352954938 11.0147940723538 -0.158666666666667 0.176 0.148450835787839 0.0791626989989014 -1.68442461354933 2.15772705126306 P14618 PKM P14618.S100.p_PKM P14618_S100s _1_1_100_100 P14618 P14618|P14618-2|P14618-3|H3BQ34 Pyruvate kinase PKM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.30308.30308.4 18.69 18.69 2.878 6 1 1 0 751.6526 2923.6181 S100s TMT10 93 (R) TATESFAsDPILYRPVAVALDTK (G) T(0.0)AT(0.0)ES(0.0)FAS(0.99)DPILY(0.0)RPVAVALDT(0.0)K K:TMT10,s:Phosphorylated S PKM 58506.4 5 6 502.1 291.2 HUMAN 1 -8.2842 11.0148 TATGSSPSPVLGQGE-p Q15811;S904-p TATGSSPSPVLGQGE 0.995010386084919 0.237505925255446 0.000999999999999992 0.118333333333333 0.044138403122124 8.2233283049414 0.000999999999999997 0.118333333333333 0.989888228328291 0.150545288924454 0.0132695722726131 1.67333540712439 Q15811 ITSN1 Q15811.S904.p_ITSN1 Q15811_S904s _1_1_904_904 Q15811 Q15811|Q15811-8|Q15811-9|Q15811-4|Q15811-2|Q15811-7|Q15811-10|F8W7U0|Q15811-3|Q15811-11|Q15811-12|Q15811-6 Intersectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28302.28302.3 23.55 20.14 1.266 8 1 1 0 1380.7148 4060.1544 S904s TMT10 891 (R) SAFTPATATGSSPsPVLGQGEKVEGLQAQALYPWR (A) S(0.0)AFT(0.0)PAT(0.0)AT(0.0)GS(0.0)S(0.0)PS(0.99)PVLGQGEKVEGLQAQALY(0.0)PWR K:TMT10,s:Phosphorylated S ITSN1 196273.9 7 4 790.1 224.94 HUMAN 1 0.0441 8.2233 TATKVVYSAPRSTGP-p O15551;S199-p TATKVVYSAPRSTGP 0.934653033486175 0.605203478523306 0.0133333333333333 0.0526666666666667 0.57738511159259 2.95984069164058 0.0133333333333333 0.0526666666666667 0.875510761860322 0.505843217056976 0.164229455799509 0.71214443460769 O15551 CLDN3 O15551.S199.p_CLDN3 O15551_S199s _1_1_199_199 O15551 O15551 Claudin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10124.10124.2 9.27 9.27 5.787 2 1 1 0 550.7895 1020.6039 S199s TMT10 196 (K) VVYsAPR (S) VVY(0.0)S(0.99)APR s:Phosphorylated S CLDN3 23831.6 2 1 3325.1 53.91 HUMAN 1 0.5774 2.9598 TATVQICSGSVNLKG-p Q5SWX8;S276-p TATVQICSGSVNLKG 0.316524229210426 0.00660858800328804 -0.18 -0.496666666666667 9.35308466963889 31.3265430615038 -0.18 -0.496666666666667 0.116062396296699 0.000736793343909803 -1.86950267661816 -6.83463401460494 Q5SWX8 C1orf27 Q5SWX8.S276.p_C1orf27 Q5SWX8_S276s _1_1_276_276 Q5SWX8 Q5SWX8|Q5SWX8-2|Q5SWX8-4|Q5SWX8-3 Protein odr-4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18431.18431.3 15.73 15.73 2.106 5 1 1 0 701.7051 2023.1258 S276s TMT10 268 (R) STATVQICsGSVNLK (G) S(0.0)T(0.0)AT(0.0)VQICS(0.99)GS(0.0)VNLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ODR4 51729.8 2 2 4425.1 31.59 HUMAN 1 -9.3531 -31.3265 TAVDASGSPKQQFIL-p P49116;S46-p TAVDASGSPKQQFIL 0.377818064461619 0.0656866747476495 0.131333333333333 -0.256333333333333 7.81481427991435 15.7354648340395 0.131333333333333 -0.256333333333333 0.165393551154542 0.0266964501441099 1.6030185504485 -3.01547275613195 P49116 NR2C2 P49116.S46.p_NR2C2 P49116_S46s _1_1_46_46 P49116 P49116-2 Nuclear receptor subfamily 2 group C member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27396.27396.4 33.1 33.1 1.122 6 1 1 0 914.2494 3574.0095 S46s TMT10 35 (K) IQIVTAVDASGsPKQQFILTSPDGAGTGK (V) IQIVT(0.0)AVDAS(0.0)GS(0.99)PKQQFILT(0.0)S(0.0)PDGAGT(0.0)GK K:TMT10,s:Phosphorylated S NR2C2 66269.1 7 2 993.1 191.1 HUMAN 1 7.8148 -15.7355 TAVDGYETDHQDYCE-p F5GWX5;T360-p TAVDGYETDHQDYCE 0.148818959257369 0.0292617695564151 0.277333333333333 0.407 16.6918109026959 20.758971267267 0.277333333333333 0.407 0.0214199725395822 0.00839658856707784 3.20217832475452 4.03979566864305 F5GWX5 CHD4 F5GWX5.T360.p_CHD4 F5GWX5_T360t _1_1_360_360 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18320.18525.5 34.64 34.64 6.799 5 1 1 0 1052.0848 5176.4211 T360t TMT10 346 (K) KKGEEEVTAVDGYEtDHQDYCEVCQQGGEIILCDTCPR (A) KKGEEEVT(0.0)AVDGY(0.0)ET(0.99)DHQDY(0.0)CEVCQQGGEIILCDT(0.0)CPR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T CHD4 218583 6 7 49.1 753.68 HUMAN 1 16.6918 20.759 TAVENMPSLKMKVVE-p P49327;S1237-p TAVENMPSLKMKVVE 0.523929192761669 0.714457930300217 0.0873333333333333 0.0476666666666667 5.19295182464808 2.01022422259259 0.0873333333333333 0.0476666666666667 0.302485678629027 0.629473682820794 1.13930284420794 0.511005637254195 P49327 FASN P49327.S1237.p_FASN P49327_S1237s _1_1_1237_1237 P49327 P49327|A0A0U1RQF0 Fatty acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23508.23508.3 16.76 16.22 10.072 2 1 1 0 696.3492 2007.0655 S1237s TMT10 1226 (K) ACLDTAVENMPsLK (M) ACLDT(0.0)AVENMPS(0.99)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FASN 276046.1 1 14 175.1 481.87 HUMAN 1 5.193 2.0102 TAVKKINSLPEIKGS-p Q8WU17;S531-p TAVKKINSLPEIKGS 0.916963697628859 0.0223846652279574 0.0193333333333333 0.310666666666667 0.734745118412156 22.5386609086146 0.0193333333333333 0.310666666666667 0.844355794560381 0.00557357576507009 0.205951261368856 4.44136077040849 Q8WU17 RNF139 Q8WU17.S531.p_RNF139 Q8WU17_S531s _1_1_531_531 Q8WU17 Q8WU17 E3 ubiquitin-protein ligase RNF139 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18447.18447.3 13.12 13.12 99 1 1 1 0 603.6996 1729.1191 S531s TMT10 528 (K) KINsLPEIK (G) KINS(1.0)LPEIK K:TMT10,s:Phosphorylated S RNF139 76905 1 1 3311.1 54.25 HUMAN 1 0.7347 22.5387 TAVLEEDSADWEKEL-p Q96A49;S313-p TAVLEEDSADWEKEL 0.865428128359002 0.0160241248006439 0.0373333333333333 -0.577666666666667 1.22066699731791 24.7943025873296 0.0373333333333333 -0.577666666666667 0.75497626814067 0.0033156581009947 0.328349860524589 -4.98571172695674 Q96A49 SYAP1 Q96A49.S313.p_SYAP1 Q96A49_S313s _1_1_313_313 Q96A49 Q96A49 Synapse-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17822.18026.3 22.21 17.39 21.655 2 1 1 0 925.4639 2694.4077 S313s TMT10 302 (K) KQEETAVLEEDsADWEK (E) KQEET(0.0)AVLEEDS(0.99)ADWEK K:TMT10,s:Phosphorylated S SYAP1 39989.7 8 5 877.1 208.41 HUMAN 1 1.2207 -24.7943 TAVLTPLSPSASENC-p Q9Y2L5;S971-p TAVLTPLSPSASENC 0.551250069551633 0.230253522657984 -0.0813333333333333 -0.152333333333333 4.77325116990548 8.40128072673327 -0.0813333333333333 -0.152333333333333 0.333176899976593 0.144501357596337 -1.06233650086697 -1.70414176972519 Q9Y2L5 TRAPPC8 Q9Y2L5.S971.p_TRAPPC8 Q9Y2L5_S971s _1_1_971_971 Q9Y2L5 Q9Y2L5|J3QQJ5 Trafficking protein particle complex subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28209.28209.3 9.35 9.35 1.152 8 1 1 0 1229.6079 3606.8303 S971s TMT10 954 (K) RPEFFTFGGNTAVLTPLsPSASENCSAYK (T) RPEFFT(0.0)FGGNT(0.0)AVLT(0.0)PLS(0.99)PS(0.0)AS(0.0)ENCS(0.0)AY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TRAPPC8 162648.8 2 6 1423.1 144.01 HUMAN 1 -4.7733 -8.4013 TAVPASDSPPTKQEV-p Q3KQU3;S125-p TAVPASDSPPTKQEV 0.246863210495205 0.0232251310177084 0.256666666666667 -0.336666666666667 11.621016142728 22.3029400477511 0.256666666666667 -0.336666666666667 0.0688491187420683 0.00588445160170123 2.26528811911599 -4.38682837429781 Q3KQU3 MAP7D1 Q3KQU3.S125.p_MAP7D1 Q3KQU3_S125s _1_1_125_125 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11675.11675.5 16.98 16.5 2.239 7 1 1 0 673.3762 3282.8715 S125s TMT10 112 (R) SSQPSPTAVPASDsPPTKQEVKK (A) S(0.0)S(0.0)QPS(0.0)PT(0.0)AVPAS(0.0)DS(0.99)PPT(0.0)KQEVKK K:TMT10,s:Phosphorylated S MAP7D1 93160.6 6 6 160.1 495.56 HUMAN 1 11.621 -22.3029 TAVSPRKSPRPAGPQ-p Q9BUH6;S152-p TAVSPRKSPRPAGPQ 0.336003398897719 0.0370584982712401 0.131333333333333 0.255666666666667 8.83385467059447 19.2406184623794 0.131333333333333 0.255666666666667 0.130802044699942 0.0119107237982765 1.7796027670115 3.7145322409111 Q9BUH6 C9orf142 Q9BUH6.S152.p_C9orf142 Q9BUH6_S152s _1_1_152_152 Q9BUH6 Q9BUH6 Protein PAXX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17151.17151.5 23.4 18.24 99 1 1 1 0 667.1626 3251.8166 S152s TMT10 151 (R) KsPRPAGPQLFLPDPDPQRGGPGPGVR (R) KS(1.0)PRPAGPQLFLPDPDPQRGGPGPGVR K:TMT10,s:Phosphorylated S PAXX 21981.5 27 4 602.1 263.13 HUMAN 1 8.8339 19.2406 TAVTGVPSPRATDPP-p M0R333;S545-p TAVTGVPSPRATDPP 0.910892402066026 0.0974242064387451 -0.0183333333333333 -0.177 0.796003892661333 13.3722604121961 -0.0183333333333333 -0.177 0.832529460537437 0.0460017081965126 -0.221895140764163 -2.57690511011141 M0R333 NotFound M0R333.S545.p_NotFound M0R333_S545s _1_1_545_545 M0R333 Q09013-1|M0R333|Q09013-6|Q09013-16|Q09013-15|Q09013-11|Q09013-7|Q09013-5|Q09013-2 Myotonin-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25158.25375.3 19.12 19.12 1.748 3 1 1 0 746.0463 2156.1583 S545s TMT10 529 (R) MELLQAEGATAVTGVPsPR (A) MELLQAEGAT(0.0)AVT(0.0)GVPS(0.99)PR s:Phosphorylated S DMPK 71318.5 4 1 5459.1 19.12 HUMAN 1 -0.796 -13.3723 TAWEFEESPRSERKN-p Q9HCJ0-2;S465-p TAWEFEESPRSERKN 0.813480829172188 0.0275560611776785 0.0413333333333333 0.301333333333333 1.72222212047728 21.1528723395007 0.0413333333333333 0.301333333333333 0.672632407679419 0.00766854139144933 0.446367891107816 4.1267055687054 Q9HCJ0 TNRC6C Q9HCJ0.2.S465.p_TNRC6C Q9HCJ0-2_S465s _1_1_465_465 Q9HCJ0-2 A0A1B0GU24|Q9HCJ0-2 Isoform 2 of Trinucleotide repeat-containing gene 6C protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11418.11418.4 15.6 15.6 2.642 3 1 1 0 633.812 2452.2621 S465s TMT10 456 (K) QNTAWEFEEsPRSERK (N) QNT(0.0)AWEFEES(0.99)PRS(0.0)ERK K:TMT10,s:Phosphorylated S TNRC6C 179888.3 3 1 1012.1 188.79 HUMAN 1 1.7222 21.1529 TAWSDEESDYEIDDR-p Q6PKG0;S631-p TAWSDEESDYEIDDR 0.223122749971548 0.046030616025259 -0.209666666666667 -0.261666666666667 12.5258192683908 17.8888353944984 -0.209666666666667 -0.261666666666667 0.055900806437533 0.0162598472188771 -2.42596276531399 -3.43701067534428 Q6PKG0 LARP1 Q6PKG0.S631.p_LARP1 Q6PKG0_S631s _1_1_631_631 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18806.18806.4 20.03 20.03 4.075 5 1 1 0 886.9232 3464.7061 S631s TMT10 620 (R) KNTFTAWSDEEsDYEIDDRDVNK (I) KNT(0.0)FT(0.0)AWS(0.0)DEES(0.99)DY(0.0)EIDDRDVNK K:TMT10,s:Phosphorylated S LARP1 123907.4 4 50 28.1 931.95 HUMAN 1 -12.5258 -17.8888 TAYAPEGSPILMPAY-p Q6P587-3;S57-p TAYAPEGSPILMPAY 0.86020254858192 0.0226339610131703 0.0263333333333333 0.363 1.2770846521511 22.4673950225661 0.0263333333333333 0.36652752282268 0.745232068137299 0.00566579031562777 0.342007375763807 4.42482905116682 Q6P587 FAHD1 Q6P587.3.S57.p_FAHD1 Q6P587-3_S57s_1_1_57_57 Q6P587-3 Q6P587-3|Q6P587-2 Isoform 3 of Acylpyruvase FAHD1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.32327.32327.4 25.69 25.69 5.041 8 1 1 0 965.7652 3764.0749 S57s M61m TMT10 36 (R) SAVLSEPVLFLKPSTAYAPEGsPILmPAYTR (N) S(0.0)AVLS(0.0)EPVLFLKPS(0.0)T(0.0)AY(0.0)APEGS(0.99)PILM(1.0)PAY(0.0)T(0.0)R K:TMT10,s:Phosphorylated S,m:Oxidized methionine FAHD1 27527.4 6 1 3794.1 42.98 HUMAN 1 1.2771 22.4674 TAYRVSRSPGASRKR-p Q12872-2;S886-p TAYRVSRSPGASRKR 0.0404299711718947 0.0280110865178744 0.663666666666667 0.293666666666667 31.1244397755705 21.0403763449243 0.663666666666667 0.293666666666667 0.000771891080366109 0.00786977589921219 6.78166717070216 4.10177400481564 Q12872 SFSWAP Q12872.2.S886.p_SFSWAP Q12872-2_S886s _1_1_886_886 Q12872-2 Q12872-2 Isoform 2 of Splicing factor, suppressor of white-apricot homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3125.3125.3 11.85 3.78 2.372 3 1 1 0 409.213 1145.6588 S886s TMT10 883 (R) VSRsPGASR (K) VS(0.0)RS(0.99)PGAS(0.0)R s:Phosphorylated S SFSWAP 110466.6 3 8 485.1 296.41 HUMAN 1 31.1244 21.0404 TCEEWIESEEDDYSL-p Q9Y2F5;S1238-p TCEEWIESEEDDYSL 0.404369997038807 0.150290903394346 -0.181666666666667 0.204333333333333 7.26152263064597 10.8286730986443 -0.181666666666667 0.204333333333333 0.187865804632918 0.0826290367781727 -1.50671817519921 2.12517965542401 Q9Y2F5 ICE1 Q9Y2F5.S1238.p_ICE1 Q9Y2F5_S1238s _1_1_1238_1238 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27017.27017.3 20.55 20.55 2.298 5 1 1 0 1205.5229 3534.5816 S1238s TMT10 1222 (K) QPCEEETLGTCEEWIEsEEDDYSLK (N) QPCEEET(0.0)LGT(0.0)CEEWIES(0.99)EEDDY(0.0)S(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ICE1 250910.2 2 13 216.1 433.09 HUMAN 1 -7.2615 10.8287 TCEKKTYSVPAHQER-p P53701;S52-p TCEKKTYSVPAHQER 0.201315182724605 0.151041845419621 -0.225666666666667 -0.165 13.522279974794 10.7935698703712 -0.225666666666667 -0.165 0.0444397904608034 0.0832996186067175 -2.605618660888 -2.11904777352516 P53701 HCCS P53701.S52.p_HCCS P53701_S52s _1_1_52_52 P53701 P53701 Cytochrome c-type heme lyase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5928.5928.4 13.34 13.34 2.654 3 1 1 0 464.2476 1774.0012 S52s TMT10 49 (K) KTYsVPAHQER (A) KT(0.0)Y(0.0)S(0.99)VPAHQER K:TMT10,s:Phosphorylated S HCCS 31000.4 2 1 5376.1 19.88 HUMAN 1 -13.5223 -10.7936 TCEKLNRSNSELEDE-p Q96PC5;S745-p TCEKLNRSNSELEDE 0.426535703473181 0.43120540019253 0.170666666666667 -0.0906666666666666 6.81425613722987 4.86720481406712 0.170666666666667 -0.0906666666666666 0.208244905807558 0.326046482004997 1.42845893699818 -1.07945229083452 Q96PC5 MIA2 Q96PC5.S745.p_MIA2 Q96PC5_S745sS747s_2_2_745_747 Q96PC5 Q8IX94|Q86UF2|P0CG41|O15320-3|O15320-4|O15320-2|Q96PC5|G3V599|O15320-5|O15320-10|A4D2H0|O15320-7|O15320-6|O15320-8|O15320-9 Melanoma inhibitory activity protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29556.29556.4 11.97 11.97 99 2 2 2 0 670.823 2520.338 S745s S747s TMT10 742 (K) LNRsNsELEDEILCLEK (E) LNRS(1.0)NS(1.0)ELEDEILCLEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MIA2 160460.4 2 12 569.1 269.96 HUMAN 1 6.8143 -4.8672 TCENSPKSPKVTGTA-p Q02224;S2608-p TCENSPKSPKVTGTA 0.250022301597546 0.00504553803227928 -0.18 -1 11.4915416964407 33.476174286952 -0.18 -1 0.0709325920560946 0.000449140865248049 -2.24245900330915 -7.54972944836967 Q02224 CENPE Q02224.S2608.p_CENPE Q02224_S2605sS2608s_2_2_2605_2608 Q02224 Q02224|Q02224-2|A0A087X0P0|Q02224-3 Centromere-associated protein E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8180.8180.3 7.38 7.38 2.247 3 2 2 0 741.3668 2062.157 S2605s S2608s TMT10 2599 (K) QVTCENsPKsPK (V) QVT(0.0)CENS(0.99)PKS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CENPE 317778.9 5 7 2732.1 72.4 HUMAN 1 -11.4915 -33.4762 TCFSPQESPSKETLE-p Q7Z2K8;S104-p TCFSPQESPSKETLE 0.998180995519267 0.380728624405919 0.000333333333333334 -0.114666666666667 0.0140590620274793 5.57255871573279 0.000333333333333342 -0.114666666666667 0.996768015478201 0.277168663978224 0.00424116710516812 -1.20775654107634 Q7Z2K8 GPRIN1 Q7Z2K8.S104.p_GPRIN1 Q7Z2K8_S104s _1_1_104_104 Q7Z2K8 Q7Z2K8|Q7Z2K8-2 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.18283.18283.3 19 19 3.094 6 1 1 0 859.0729 2495.2311 S104s TMT10 89 (R) GSLACPSPTCFSPQEsPSK (E) GS(0.0)LACPS(0.0)PT(0.0)CFS(0.0)PQES(0.99)PS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GPRIN1 103196.3 1 4 292.1 381.4 HUMAN 1 0.0141 -5.5726 TCGQCKGSLERKSWT-p Q8TEU7;S1427-p TCGQCKGSLERKSWT 0.253428545649867 0.00987532593183393 0.38 -0.476666666666667 11.3590161786419 28.2124378069925 0.38 -0.476666666666667 0.0731304729549861 0.00150923274506598 2.21912970892462 -5.89753730832308 Q8TEU7 RAPGEF6 Q8TEU7.S1427.p_RAPGEF6 Q8TEU7_S1427s _1_1_1427_1427 Q8TEU7 E9PCH4|Q8TEU7-4 Rap guanine nucleotide exchange factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5224.5224.3 7.86 2.46 7.858 2 1 1 0 611.9637 1753.9089 S1427s TMT10 1420 (R) TCGQCKGsLER (K) T(0.0)CGQCKGS(0.99)LER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RAPGEF6 180960.1 1 13 795.1 224.05 HUMAN 1 11.359 -28.2124 TCKIVLATPRLHITI-p Q6P0N0;T346-p TCKIVLATPRLHITI 0.242329859196687 0.0523908103942367 0.229666666666667 -0.337333333333333 11.7756347780989 17.0878498155256 0.229666666666667 -0.337333333333333 0.0664410553531529 0.0195530728542808 2.29260055442691 -3.27744411865973 Q6P0N0 MIS18BP1 Q6P0N0.T346.p_MIS18BP1 Q6P0N0_T346t _1_1_346_346 Q6P0N0 Q6P0N0|G5E9K5|Q6P0N0-2 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15798.15798.2 7.94 7.94 99 1 1 1 0 539.8152 998.656 T346t TMT10 342 (K) IVLAtPR (L) IVLAT(1.0)PR t:Phosphorylated T MIS18BP1 129996 1 15 54.1 728.39 HUMAN 1 11.7756 -17.0878 TCKKRQSSESDIESV-p Q8WY36;S479-p TCKKRQSSESDIESV 0.0404299711718947 0.0338775761536824 -0.553666666666667 -0.323 31.1667183251337 19.8176774850545 -0.553666666666667 -0.323 0.000764413181655387 0.0104287498775974 -6.795105305318 -3.8363826326593 Q8WY36 BBX Q8WY36.S479.p_BBX Q8WY36_S479s_1_1_479_479 Q8WY36 Q8WY36|Q8WY36-2|C9JA69 HMG box transcription factor BBX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.38163.38163.2 17.17 17.17 1.276 6 1 1 0 1181.0665 2298.1914 Q477q S479s Hydrogen 477 (R) qSsESDIESVIYTIEAVAK (G) Q(1.0)S(0.0)S(0.99)ES(0.0)DIES(0.0)VIY(0.0)T(0.0)IEAVAK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S BBX 106212.3 13 5 621.1 259.66 HUMAN 1 -31.1667 -19.8177 TCLNSPDSPPRSDPT-p P11831;S224-p TCLNSPDSPPRSDPT 0.934834025151521 0.0296331329731797 0.0123333333333333 0.293333333333333 0.575834530021623 20.6853834983821 0.0123333333333333 0.293333333333333 0.875823405304865 0.00854007432016601 0.163812616908504 4.02367857222857 P11831 SRF P11831.S224.p_SRF P11831_S224s _1_1_224_224 P11831 P11831 Serum response factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18775.18775.3 10.16 10.16 2.225 3 1 1 0 659.9945 1898.0003 S224s TMT10 213 (K) ALIQTCLNSPDsPPR (S) ALIQT(0.0)CLNS(0.0)PDS(0.99)PPR C:Carbamidomethylation,s:Phosphorylated S SRF 51648.8 6 2 1336.1 152.35 HUMAN 1 0.5758 20.6854 TCLSWEFSEKDDEPE-p Q2NKX8;S1004-p TCLSWEFSEKDDEPE 0.543303086473255 0.00759424447007243 -0.0933333333333333 -0.467 4.893133713922 30.2703909018237 -0.0933333333333333 -0.467 0.324105669875833 0.000939638731312578 -1.08443742441249 -6.50438189543295 Q2NKX8 ERCC6L Q2NKX8.S1004.p_ERCC6L Q2NKX8_S1004s _1_1_1004_1004 Q2NKX8 Q2NKX8|B5MDQ0 DNA excision repair protein ERCC-6-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25267.25267.3 14.11 10.27 13.608 3 1 1 0 1065.1919 3113.5956 S1004s TMT10 997 (K) TCLSWEFsEKDDEPEEVVVK (A) T(0.0)CLS(0.0)WEFS(0.99)EKDDEPEEVVVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ERCC6L 142070.4 3 9 422.1 320.12 HUMAN 1 -4.8931 -30.2704 TCMSSQGSDDEQIKR-p B5ME97;S28-p TCMSSQGSDDEQIKR 0.4319622910657 0.0318671396999147 0.119666666666667 0.329666666666667 6.71211611895391 20.2090540031056 0.119666666666667 0.329666666666667 0.213200583080543 0.00953003728343198 1.41052045995806 3.92024255850477 B5ME97 SEPT10 B5ME97.S28.p_SEPT10 B5ME97_S28s _1_1_28_28 B5ME97 B5ME97|Q9P0V9-2|E7EX04|E7EW69 Septin 10, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10934.10934.2 14.95 14.95 2.356 5 1 1 0 1112.9983 2145.0204 S28s TMT10 20 (K) TTCMSSQGsDDEQIK (R) T(0.0)T(0.0)CMS(0.0)S(0.0)QGS(0.99)DDEQIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SEPT10 63742.6 6 1 3428.1 51.33 HUMAN 1 6.7121 20.2091 TCPLAPASPPEPQSP-p Q66K64;S282-p TCPLAPASPPEPQSP 0.505331441375725 0.431053879775285 0.102 -0.134333333333333 5.47289838297347 4.86944829173816 0.102 -0.134333333333333 0.283602569743451 0.325878096466679 1.19005675465217 -1.07986518592215 Q66K64 DCAF15 Q66K64.S282.p_DCAF15 Q66K64_S282sS288s_2_2_282_288 Q66K64 Q66K64 DDB1- and CUL4-associated factor 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34160.34160.5 14.21 14.21 5.241 7 2 2 0 999.2639 4832.336 S282s S288s TMT10 265 (R) SFCQILYDHSTCPLAPAsPPEPQsPELPPALPSFCPEAAPAR (S) S(0.0)FCQILY(0.0)DHS(0.0)T(0.0)CPLAPAS(0.99)PPEPQS(0.99)PELPPALPS(0.0)FCPEAAPAR C:Carbamidomethylation,s:Phosphorylated S DCAF15 67432.2 1 4 3179.1 58.55 HUMAN 1 5.4729 -4.8694 TCSTLAESPRNGLQE-p Q6P2E9;S844-p TCSTLAESPRNGLQE 0.769256878109637 0.0201264196371064 -0.0426666666666667 -0.381 2.18272607913435 23.2406845189232 -0.0426666666666667 -0.381 0.604961019751141 0.00474167242880437 -0.548898275343618 -4.60632765901728 Q6P2E9 EDC4 Q6P2E9.S844.p_EDC4 Q6P2E9_S844s_1_1_844_844 Q6P2E9 Q6P2E9|Q6P2E9-2 Enhancer of mRNA-decapping protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11708.11708.3 16.25 10.57 3.57 4 1 1 0 820.4013 2378.2386 S844s N847n TMT10 836 (R) ETCSTLAEsPRnGLQEK (H) ET(0.0)CS(0.0)T(0.0)LAES(0.99)PRN(1.0)GLQEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated EDC4 153084.9 9 15 177.1 481.34 HUMAN 1 -2.1827 -23.2407 TCTKSGPSPLSSPNG-p O75179;S1696-p TCTKSGPSPLSSPNG 0.340397449551181 0.0269447225862344 -0.150333333333333 -0.656333333333333 8.70668770479151 21.3025767400165 -0.150333333333333 -0.656333333333333 0.134688721195996 0.00740870540294022 -1.75759006016668 -4.16002205223631 O75179 ANKRD17 O75179.S1696.p_ANKRD17 O75179_S1696s _1_1_1696_1696 O75179 O75179|O75179-2|O75179-7|O75179-6|O75179-4 Ankyrin repeat domain-containing protein 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10290.10290.2 13.87 13.87 1.589 4 1 1 0 833.4343 1585.895 S1696s TMT10 1693 (K) SGPsPLSSPNGK (L) S(0.0)GPS(0.99)PLS(0.0)S(0.0)PNGK K:TMT10,s:Phosphorylated S ANKRD17 276135.9 6 7 287.2 383.69 HUMAN 1 -8.7067 -21.3026 TCTSSSLSPTKIGHL-p Q9BZR9;S321-p TCTSSSLSPTKIGHL 0.468065510489932 0.00441986327131149 0.0976666666666667 -0.780666666666667 6.08770560255577 34.5963887554071 0.0976666666666667 -0.780666666666667 0.246166777092304 0.000347025288912449 1.30017257148213 -7.94680603961095 Q9BZR9 TRIM8 Q9BZR9.S321.p_TRIM8 Q9BZR9_S321s _1_1_321_321 Q9BZR9 Q9BZR9 Probable E3 ubiquitin-protein ligase TRIM8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8876.8876.3 16.47 16.47 1.233 8 1 1 0 645.9886 1855.9835 S321s TMT10 312 (R) TQTCTSSSLsPTK (I) T(0.0)QT(0.0)CT(0.0)S(0.0)S(0.0)S(0.0)LS(0.99)PT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TRIM8 63028.3 2 1 4575.1 29.52 HUMAN 1 6.0877 -34.5964 TCVMCHRSLDGIPFT-p Q93052;S508-p TCVMCHRSLDGIPFT 0.468720713206654 0.149576342954881 0.227333333333333 0.16 6.07461122033125 10.8575971521078 0.227333333333333 0.16 0.246910112851886 0.0820805550877298 1.29784406624066 2.13023371236001 Q93052 LPP Q93052.S508.p_LPP Q93052_S508s _1_1_508_508 Q93052 Q93052|A0A087WZF1 Lipoma-preferred partner HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.32429.32429.5 21.43 21.43 6.375 2 1 1 0 688.1625 3356.828 S508s TMT10 508 (R) sLDGIPFTVDAGGLIHCIEDFHKK (F) S(0.99)LDGIPFT(0.0)VDAGGLIHCIEDFHKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LPP 67171.5 1 6 1149.1 172.4 HUMAN 1 6.0746 10.8576 TCYGSPQSPQLIRRG-p Q9BTX1;S474-p TCYGSPQSPQLIRRG 0.240709737266473 0.415142787638217 0.214 -0.0776666666666666 11.8206507606266 5.07893462824401 0.214 -0.0776666666666666 0.0657559299201932 0.310532126389334 2.30056288040883 -1.11827475657831 Q9BTX1 NDC1 Q9BTX1.S474.p_NDC1 Q9BTX1_S474s _1_1_474_474 Q9BTX1 Q9BTX1|Q9BTX1-2|Q9BTX1-5|Q9BTX1-6|Q9BTX1-4 Nucleoporin NDC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29155.29155.4 25.44 25.44 1.133 4 1 1 0 666.5704 2583.2897 S474s TMT10 459 (R) MAGIFDVNTCYGSPQsPQLIR (R) MAGIFDVNT(0.0)CY(0.0)GS(0.0)PQS(0.99)PQLIR C:Carbamidomethylation,s:Phosphorylated S NDC1 76988 6 11 1059.1 182.55 HUMAN 1 11.8207 -5.0789 TDAGGGLSSDEEEGT-p Q01831;S883-p TDAGGGLSSDEEEGT 0.214466572074941 0.0137900852034519 0.209 0.429333333333333 12.8870633288389 25.8344379369357 0.209 0.429333333333333 0.0514391362117161 0.00260949342128661 2.49073611799528 5.25142497851436 Q01831 XPC Q01831.S883.p_XPC Q01831_S883sS884s_2_2_883_884 Q01831 Q01831|Q01831-2 DNA repair protein complementing XP-C cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6678.6678.3 26.55 26.55 4.612 7 2 2 0 1016.7317 2888.2413 S883s S884s Hydrogen 869 (K) SEAAAPHTDAGGGLssDEEEGTSSQAEAAR (I) S(0.0)EAAAPHT(0.0)DAGGGLS(0.99)S(0.99)DEEEGT(0.0)S(0.0)S(0.0)QAEAAR s:Phosphorylated S XPC 106806.6 5 12 780.1 226.3 HUMAN 1 12.8871 25.8344 TDAGLKESPLQTPTE-p P10636;S46-p TDAGLKESPLQTPTE 0.814324717106937 0.0554860227632965 -0.0336666666666667 0.294 1.71408741150623 16.7326728311979 -0.0336666666666667 0.294 0.673893486685318 0.0212193812993901 -0.444510552619605 3.20776987318173 P10636 MAPT P10636.S46.p_MAPT P10636_S46s_1_1_46_46 P10636 P10636-9|A0A0G2JMX7|A0A0G2JS76|A0A0G2JPD5|A0A0G2JQJ7 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13814.13814.5 18.5 18.5 1.968 10 1 1 0 1065.0836 5225.4068 M31m S46s TMT10 25 (K) DQGGYTmHQDQEGDTDAGLKEsPLQTPTEDGSEEPGSETSDAK (S) DQGGY(0.0)T(0.0)M(1.0)HQDQEGDT(0.0)DAGLKES(0.99)PLQT(0.0)PT(0.0)EDGS(0.0)EEPGS(0.0)ET(0.0)S(0.0)DAK K:TMT10,m:Oxidized methionine,s:Phosphorylated S MAPT 79154.4 2 1 119.1 551.6 HUMAN 1 -1.7141 16.7327 TDASATKSYENLAAE-p Q9UJC3;S450-p TDASATKSYENLAAE 0.980051969422018 0.757356365974704 -0.00433333333333335 0.0353333333333334 0.173921456210188 1.66700270046037 -0.00433333333333337 0.0353333333333334 0.960744383755379 0.681239356368441 -0.0515399620563676 0.433678487250089 Q9UJC3 HOOK1 Q9UJC3.S450.p_HOOK1 Q9UJC3_S450s _1_1_450_450 Q9UJC3 Q9UJC3|Q9UJC3-2 Protein Hook homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.29313.29313.3 26.02 26.02 3.121 3 1 1 0 698.6664 2014.0153 S450s TMT10 450 (K) sYENLAAEIMPVEYR (E) S(0.99)Y(0.0)ENLAAEIMPVEY(0.0)R s:Phosphorylated S HOOK1 85274 5 3 1245.1 162.36 HUMAN 1 -0.1739 1.667 TDASDGDSVALVKET-p Q14789-2;S1142-p TDASDGDSVALVKET 0.371815066941359 0.98745330848775 0.177666666666667 -0.00266666666666666 7.96825318303653 0.0827574789485905 0.177666666666667 -0.00266666666666666 0.159652117000994 0.981124796710018 1.62965288483161 -0.0247696117404761 Q14789 GOLGB1 Q14789.2.S1142.p_GOLGB1 Q14789-2_S1142s _1_1_1142_1142 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22537.22537.3 14.13 14.13 2.213 5 1 1 0 782.0753 2264.2386 S1142s TMT10 1130 (K) LITSNTDASDGDsVALVK (E) LIT(0.0)S(0.0)NT(0.0)DAS(0.0)DGDS(0.99)VALVK K:TMT10,s:Phosphorylated S GOLGB1 378557.2 1 14 93.1 610.98 HUMAN 1 7.9683 -0.0828 TDAVPDGSDEEEVAY-p Q9NWZ5;S539-p TDAVPDGSDEEEVAY 0.975439658986068 0.229627813805345 -0.00533333333333334 0.155666666666667 0.20970004188965 8.41770899317945 -0.00533333333333335 0.155666666666667 0.952861973933474 0.143955777900192 -0.0619033885646791 1.70698489869619 Q9NWZ5 UCKL1 Q9NWZ5.S539.p_UCKL1 Q9NWZ5_S539s _1_1_539_539 Q9NWZ5 Q9NWZ5|Q9NWZ5-4 Uridine-cytidine kinase-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.34190.34818.4 22.37 22.37 5.031 5 1 1 0 893.409 3490.6488 S539s TMT10 518 (R) IIPGIGNFGDRYFGTDAVPDGsDEEEVAYTG (-) IIPGIGNFGDRY(0.0)FGT(0.0)DAVPDGS(0.99)DEEEVAY(0.0)T(0.0)G s:Phosphorylated S UCKL1 61539.3 7 4 2046.1 100.92 HUMAN 1 -0.2097 8.4177 TDAVRTLSNAEDYLD-p Q92882;S202-p TDAVRTLSNAEDYLD 0.0304032852631674 0.0359648549186556 -0.690666666666667 -0.399333333333333 35.476213826385 19.436494027519 -0.690666666666667 -0.399333333333333 0.000283386147592772 0.0113854604037163 -8.28754214949802 -3.75565733186888 Q92882 OSTF1 Q92882.S202.p_OSTF1 Q92882_S202s _1_1_202_202 Q92882 Q92882 Osteoclast-stimulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23624.23624.2 13.27 13.27 2.441 4 1 1 0 1005.8993 1930.8239 S202s TMT10 200 (R) TLsNAEDYLDDEDSD (-) T(0.0)LS(0.99)NAEDY(0.0)LDDEDS(0.0)D s:Phosphorylated S OSTF1 23957.5 3 3 2391.1 85.48 HUMAN 1 -35.4762 -19.4365 TDAYGPPSNFLEIDI-p A0A087X0R6;S27-p TDAYGPPSNFLEIDI 0.108085133456159 0.011978917001094 0.310666666666667 0.708333333333333 20.300058511456 26.8468854403969 0.310666666666667 0.708333333333334 0.00933241727369879 0.00206686188239321 3.94364412032137 5.51970233387639 A0A087X0R6 NotFound A0A087X0R6.S27.p_NotFound A0A087X0R6_S27s _1_1_27_27 A0A087X0R6 Q9UMY4|A0A087X0R6|Q9UMY4-2|Q9UMY4-3 Sorting nexin-12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.31887.31887.4 24.66 24.66 9.455 5 1 1 0 1075.0557 4217.2395 S27s TMT10 11 (R) RLNSKPQDLTDAYGPPsNFLEIDIFNPQTVGVGR (A) RLNS(0.0)KPQDLT(0.0)DAY(0.0)GPPS(0.99)NFLEIDIFNPQT(0.0)VGVGR K:TMT10,s:Phosphorylated S SNX12 20053.4 3 3 2063.1 99.88 HUMAN 1 20.3001 26.8469 TDCEHADSLAQAAED-p Q15334;S488-p TDCEHADSLAQAAED 0.146674740935683 0.00714823122797951 0.242 0.496333333333333 16.9368911398834 30.7062686459675 0.242 0.496333333333333 0.0202446785820431 0.000849910384050001 3.25021527907216 6.63906793343015 Q15334 LLGL1 Q15334.S488.p_LLGL1 Q15334_S488s _1_1_488_488 Q15334 Q15334|A0A087WW77 Lethal(2) giant larvae protein homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30603.30603.4 21.03 17.34 3.284 4 1 1 0 979.4689 3834.8798 S488s TMT10 473 (K) LSTAGLFQTDCEHADsLAQAAEDDWPPFRK (V) LS(0.0)T(0.0)AGLFQT(0.0)DCEHADS(0.99)LAQAAEDDWPPFRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LLGL1 116728.2 2 1 881.2 207.2 HUMAN 1 16.9369 30.7063 TDDDLVESL______-p D6RHI7;S248-p TDDDLVESL______ 0.325611631944441 0.015917395501238 0.138666666666667 0.343666666666667 9.12435143874758 24.847852279619 0.138666666666667 0.343666666666667 0.122338980246254 0.00327502614999047 1.82989096455389 4.99915522774562 D6RHI7 NotFound D6RHI7.S248.p_NotFound D6RHI7_T241tS248s_2_2_241_248 D6RHI7 P51946|D6RHI7 Cyclin-H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22469.22469.3 13.12 10.77 6.354 3 2 2 0 893.7241 2519.219 T241t S248s TMT10 233 (K) SKHEEEEWtDDDLVEsL (-) S(0.0)KHEEEEWT(0.99)DDDLVES(0.99)L K:TMT10,t:Phosphorylated T,s:Phosphorylated S CCNH 29154.1 3 4 2849.1 68.11 HUMAN 1 9.1244 24.8479 TDDEMTGYVATRWYR-p Q16539-2;Y182-p TDDEMTGYVATRWYR 0.186135821577835 0.00719792492613561 0.638333333333333 0.547333333333333 14.3508999946694 30.6612975361873 0.638333333333333 0.547333333333333 0.0367206195947285 0.000858756913445995 2.75757508403886 6.62506830532731 Q16539 MAPK14 Q16539.2.Y182.p_MAPK14 Q16539-2_Y182y _1_1_182_182 Q16539-2 Q16539|Q16539-2|Q16539-4|Q16539-3|B4E0K5|Q16539-5 Isoform CSBP1 of Mitogen-activated protein kinase 14 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8164.8506.3 30.66 27.52 7.967 4 1 1 0 602.264 1724.8111 Y182y TMT10 174 (R) HTDDEMTGyVATR (W) HT(0.0)DDEMT(0.0)GY(0.99)VAT(0.0)R y:Phosphorylated Y MAPK14 41720.9 9 1 89.1 30.66 HUMAN 1 14.3509 30.6613 TDDSPKDSQEDLQER-p Q969E4;S125-p TDDSPKDSQEDLQER 0.902213389383327 0.00230682915932072 0.0343333333333333 0.888333333333333 0.877885582924256 40.6444392830429 0.0343333333333333 0.888333333333333 0.81698003150794 8.62096876719799e-05 0.242960433092388 10.4250570779278 Q969E4 TCEAL3 Q969E4.S125.p_TCEAL3 Q969E4_S125s _1_1_125_125 Q969E4 Q5H9L2|Q969E4|Q6IPX3 Transcription elongation factor A protein-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7303.7513.3 16.48 15.32 2.355 3 1 1 0 786.7012 2278.1199 S125s TMT10 117 (R) GTDDSPKDsQEDLQER (H) GT(0.0)DDS(0.0)PKDS(0.99)QEDLQER K:TMT10,s:Phosphorylated S TCEAL3 22616 1 6 943.1 197.95 HUMAN 1 0.8779 40.6444 TDDVKKNSLDELRAQ-p Q9Y5K6;S582-p TDDVKKNSLDELRAQ 0.933580456542056 0.524213898579004 0.017 0.065 0.587452717546734 3.76942711514797 0.017 0.065 0.873483545495511 0.419814358727454 0.166933107859638 0.872648923415088 Q9Y5K6 CD2AP Q9Y5K6.S582.p_CD2AP Q9Y5K6_S582s _1_1_582_582 Q9Y5K6 Q9Y5K6 CD2-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13262.13262.5 10.64 10.64 2.502 2 1 1 0 592.1382 2876.6863 S582s TMT10 571 (K) AKVETDDVKKNsLDELR (A) AKVET(0.0)DDVKKNS(0.99)LDELR K:TMT10,s:Phosphorylated S CD2AP 71678 2 12 413.1 321.76 HUMAN 1 0.5875 3.7694 TDEEAGESGGEGIFR-p Q9ULL5-3;S1568-p TDEEAGESGGEGIFR 0.148266672319898 0.277595264999349 0.272 0.138333333333333 16.7944399421049 7.33339399001626 0.272 0.138333333333333 0.0209197266652069 0.184782398920662 3.222256881578 1.51881522118825 Q9ULL5 PRR12 Q9ULL5.3.S1568.p_PRR12 Q9ULL5-3_T1561tS1568s_2_2_1561_1568 Q9ULL5-3 Q9ULL5-3|Q9ULL5-2 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16930.16930.5 21.85 21.85 21.849 3 2 2 0 649.8883 3085.4784 T1561t S1568s TMT10 1551 (K) KQETAAVCGEtDEEAGEsGGEGIFR (E) KQET(0.0)AAVCGET(0.99)DEEAGES(0.99)GGEGIFR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S PRR12 212010 4 25 182.1 477.91 HUMAN 1 16.7944 7.3334 TDFAQYNSYGDVSGG-p O14639;S677-p TDFAQYNSYGDVSGG 0.659702176410936 0.20885127635206 0.061 0.129333333333333 3.38569521398732 8.94823846347044 0.061 0.129333333333333 0.458596228325611 0.127401972981335 0.797719361984516 1.79875957689801 O14639 ABLIM1 O14639.S677.p_ABLIM1 O14639_S677s_1_1_677_677 O14639 O14639|O14639-6|O14639-2|O14639-5|O14639-3|O14639-4 Actin-binding LIM protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18484.18484.5 25.02 25.02 3.52 8 1 1 0 924.6264 4538.1567 N662n S677s TMT10 662 (R) nGLHRPVSTDFAQYNsYGDVSGGVRDYQTLPDGHMPAMR (M) N(0.99)GLHRPVS(0.0)T(0.0)DFAQY(0.0)N(0.0)S(0.99)Y(0.0)GDVS(0.0)GGVRDY(0.0)QT(0.0)LPDGHMPAMR n:Deamidated,s:Phosphorylated S ABLIM1 89568.8 10 12 435.1 313.2 HUMAN 1 3.3857 8.9482 TDFCVEDYIRCKDTG-p Q3B820-3;Y211-p TDFCVEDYIRCKDTG 0.985102205736535 0.24505245873321 0.00366666666666666 0.120666666666667 0.130736716742014 8.04774510487522 0.00366666666666664 0.120666666666667 0.970345348460188 0.156756475225277 0.0389257788845432 1.64291810350896 Q3B820 FAM161A Q3B820.3.Y211.p_FAM161A Q3B820-3_T193tT204tY211y_3_3_193_211 Q3B820-3 Q3B820-3|Q3B820-2 Isoform 3 of Protein FAM161A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29981.29981.4 7.39 1.9 1.455 4 3 3 0 1044.4606 3918.9328 T193t M202m T204t Y211y TMT10 191 (R) MMtYAKELINNmWtDFCVEDyIRCK (D) M(0.0)M(0.0)T(0.99)Y(0.0)AKELINNM(0.99)WT(0.99)DFCVEDY(0.99)IRCK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,m:Oxidized methionine,y:Phosphorylated Y FAM161A 84231.8 1 4 4058.1 38.46 HUMAN 1 0.1307 8.0477 TDGDLGDSGKRKKGL-p O75153;S170-p TDGDLGDSGKRKKGL 0.542243681455739 0.285496750233275 0.106333333333333 0.288 4.90470468442062 7.18173799158985 0.106333333333333 0.288 0.323243299789236 0.191349001727367 1.0865654582893 1.49236639766706 O75153 CLUH O75153.S170.p_CLUH O75153_S170s _1_1_170_170 O75153 O75153 Clustered mitochondria protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37717.37717.4 9.81 9.81 1.179 7 1 1 0 969.4525 3794.8107 S170s TMT10 141 (K) SLDPSDAFNGVDCNSLSFLSVFTDGDLGDsGK (R) S(0.0)LDPS(0.0)DAFNGVDCNS(0.0)LS(0.0)FLS(0.0)VFT(0.0)DGDLGDS(0.99)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CLUH 148093.5 1 1 2371.1 86.28 HUMAN 1 4.9047 7.1817 TDGDMRVTPEPGAGP-p Q86YP4-3;T49-p TDGDMRVTPEPGAGP 0.286971546466065 0.156167589828146 0.200333333333333 0.242 10.2258394855861 10.6049396896925 0.200333333333333 0.242 0.0949327477698576 0.0869973514270077 2.02097525141511 2.08613186568484 Q86YP4 GATAD2A Q86YP4.3.T49.p_GATAD2A Q86YP4-3_T49t_1_1_49_49 Q86YP4-3 Q86YP4-3|Q86YP4-2|H7C3H1|V9GY85 Isoform 3 of Transcriptional repressor p66-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23298.23298.4 21.47 21.47 1.102 4 1 1 0 819.9111 3180.652 M46m T49t TMT10 34 (R) GLLASDLNTDGDmRVtPEPGAGPTQGLLR (A) GLLAS(0.0)DLNT(0.0)DGDM(1.0)RVT(0.99)PEPGAGPT(0.0)QGLLR m:Oxidized methionine,t:Phosphorylated T GATAD2A 68475 5 3 1046.1 184.48 HUMAN 1 10.2258 10.6049 TDGLRRLSGNEYVFT-p O95263;S517-p TDGLRRLSGNEYVFT 0.28377835512685 0.111211777557805 -0.156333333333333 0.341666666666667 10.3246347769214 12.5905536803255 -0.156333333333333 0.341666666666667 0.0927975525617561 0.0550737478625114 -2.03817138541235 2.43625532624572 O95263 PDE8B O95263.S517.p_PDE8B O95263_S517s _1_1_517_517 O95263 O95263|O95263-4|O95263-6|O95263-3|O95263-2 High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16688.16688.3 8.38 8.38 5.028 3 1 1 0 617.9976 1772.0107 S517s TMT10 515 (R) RLsGNEYVFTK (N) RLS(0.99)GNEY(0.0)VFT(0.0)K K:TMT10,s:Phosphorylated S PDE8B 100517.6 1 1 6974.1 8.38 HUMAN 1 -10.3246 12.5906 TDGPPAGSPGQDSDL-p Q6DT37;S480-p TDGPPAGSPGQDSDL 0.470393690548577 0.559030464172909 0.160333333333333 -0.0773333333333333 6.04563771232179 3.40424172847063 0.160333333333333 -0.0773333333333333 0.248562855099313 0.456641972232963 1.29268950107065 -0.801266136083303 Q6DT37 CDC42BPG Q6DT37.S480.p_CDC42BPG Q6DT37_S480s _1_1_480_480 Q6DT37 Q6DT37 Serine/threonine-protein kinase MRCK gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16357.16357.5 20.14 20.14 3.551 5 1 1 0 683.3359 3332.6781 S480s TMT10 468 (K) ASLSQTDGPPAGsPGQDSDLRQELDRLHR (E) AS(0.0)LS(0.0)QT(0.0)DGPPAGS(0.99)PGQDS(0.0)DLRQELDRLHR s:Phosphorylated S CDC42BPG 173882.5 3 1 997.1 190.4 HUMAN 1 6.0456 -3.4042 TDGQRSKSLADIKES-p Q08AD1;S844-p TDGQRSKSLADIKES 0.167043422870752 0.462451123182262 -0.237666666666667 0.157333333333333 15.5427498520947 4.46670900292977 -0.237666666666667 0.157333333333333 0.0279077622680621 0.357543674996049 -2.98087773785034 1.00516941467409 Q08AD1 CAMSAP2 Q08AD1.S844.p_CAMSAP2 Q08AD1_S844s _1_1_844_844 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21416.21416.4 11.39 8.5 2.448 2 1 1 0 607.8241 2348.3099 S844s TMT10 844 (K) sLADIKESMENPQAK (W) S(0.99)LADIKES(0.0)MENPQAK K:TMT10,s:Phosphorylated S CAMSAP2 169284 2 11 28.2 931.95 HUMAN 1 -15.5427 4.4667 TDGVDKLSGKEQSFT-p P46100;S925-p TDGVDKLSGKEQSFT 0.213229385106179 0.00876336914786816 -0.480333333333333 0.566666666666667 12.9483927583512 29.1731911961148 -0.480333333333333 0.566666666666667 0.0507178370659555 0.00120970891270876 -2.50177172007387 6.17502216736133 P46100 ATRX P46100.S925.p_ATRX P46100_S925s _1_1_925_925 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10855.10855.3 13.82 13.82 1.414 4 1 1 0 787.088 2279.281 S925s TMT10 912 (K) QQASASTDGVDKLsGK (E) QQAS(0.0)AS(0.0)T(0.0)DGVDKLS(0.99)GK K:TMT10,s:Phosphorylated S ATRX 285034.2 1 27 18.1 1035.36 HUMAN 1 -12.9484 29.1732 TDHEEKASNEDVTKA-p O75475;S129-p TDHEEKASNEDVTKA 0.242755319930286 0.00143571622779311 -0.601 1.171 11.7614303080806 45.8717919185392 -0.601 1.171 0.0666587198826548 2.58714522716058e-05 -2.29008909810411 13.1161913815521 O75475 PSIP1 O75475.S129.p_PSIP1 O75475_S129s _1_1_129_129 O75475 O75475|O75475-2|O75475-3 PC4 and SFRS1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6900.6900.4 18.21 18.21 4.457 3 1 1 0 654.3193 2534.2825 S129s TMT10 120 (K) EDTDHEEKAsNEDVTK (A) EDT(0.0)DHEEKAS(0.99)NEDVT(0.0)K K:TMT10,s:Phosphorylated S PSIP1 60216.3 3 5 382.1 334.17 HUMAN 1 -11.7614 45.8718 TDIPASASPPPVAGV-p Q8N1G0;S253-p TDIPASASPPPVAGV 0.321266030442159 0.00995309608398391 -0.157 0.427333333333333 9.23296646533057 28.1359834758504 -0.157 0.427333333333333 0.119317282472268 0.00153603691272719 -1.8486982376502 5.87587825640708 Q8N1G0 ZNF687 Q8N1G0.S253.p_ZNF687 Q8N1G0_S253s _1_1_253_253 Q8N1G0 Q8N1G0|Q8N1G0-2|F8WCX2 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30866.31071.3 17.66 17.66 1.111 3 1 1 0 836.4503 2427.3688 S253s TMT10 245 (K) ATDIPASAsPPPVAGVPFFK (Q) AT(0.0)DIPAS(0.0)AS(0.99)PPPVAGVPFFK K:TMT10,s:Phosphorylated S ZNF687 131979.7 3 6 156.1 501.88 HUMAN 1 -9.233 28.136 TDIPRNLSFIAALTE-p Q9H7J1;S16-p TDIPRNLSFIAALTE 0.356264862906362 0.228184769826677 0.26 -0.17 8.33030925815262 8.45316726273165 0.26 -0.17 0.146882168012493 0.142785226148151 1.69241744102797 -1.71312100285569 Q9H7J1 PPP1R3E Q9H7J1.S16.p_PPP1R3E Q9H7J1_S16s _1_1_16_16 Q9H7J1 Q9H7J1 Protein phosphatase 1 regulatory subunit 3E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32051.32051.3 15.91 14.77 15.908 2 1 1 0 515.2739 1463.8419 S16s TMT10 14 (R) NLsFIAALTER (A) NLS(0.99)FIAALT(0.0)ER s:Phosphorylated S PPP1R3E 30757.1 2 1 5102.1 22.95 HUMAN 1 8.3303 -8.4532 TDITPPPSPEDLAEL-p Q8WVB6-2;S163-p TDITPPPSPEDLAEL 0.458740586170401 0.32064971783101 0.101 0.106 6.24306200819542 6.53160198310473 0.101 0.106 0.237516507782368 0.222248992903387 1.32774980875102 1.3783912343087 Q8WVB6 CHTF18 Q8WVB6.2.S163.p_CHTF18 Q8WVB6-2_T159tS163s_2_2_159_163 Q8WVB6-2 Q8WVB6-2|F8WCC1 Isoform 2 of Chromosome transmission fidelity protein 18 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37104.37104.5 13.51 11.6 1.164 8 2 2 0 1020.6512 4939.3305 T159t S163s TMT10 142 (R) SEEMEEPPPPDSSPTDItPPPsPEDLAELWGHGVSEAAADVGLTR (A) S(0.0)EEMEEPPPPDS(0.0)S(0.0)PT(0.0)DIT(0.99)PPPS(0.99)PEDLAELWGHGVS(0.0)EAAADVGLT(0.0)R t:Phosphorylated T,s:Phosphorylated S CHTF18 110890.8 2 7 1974.1 104.64 HUMAN 1 6.2431 6.5316 TDKDCNESTDNDELE-p Q9Y2K1;S355-p TDKDCNESTDNDELE 0.234381279697054 0.165307708711247 0.334 -0.373 12.0788813885838 10.2801046624002 0.334 -0.373 0.0619600644938158 0.0937539412508581 2.34633377868116 -2.02957220745298 Q9Y2K1 ZBTB1 Q9Y2K1.S355.p_ZBTB1 Q9Y2K1_S355sT356t_2_2_355_356 Q9Y2K1 Q9Y2K1|Q9Y2K1-2 Zinc finger and BTB domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20399.20399.3 14.19 14.19 6.596 4 2 2 0 1222.1719 3504.5637 S355s T356t TMT10 347 (K) VTDKDCNEstDNDELEDEPEEPFYR (Y) VT(0.0)DKDCNES(0.99)T(0.99)DNDELEDEPEEPFY(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T ZBTB1 84068.6 2 2 3313.1 54.23 HUMAN 1 12.0789 -10.2801 TDKDDSRSITNLTGT-p Q8IZ41;S719-p TDKDDSRSITNLTGT 0.302581797188097 0.4665133486606 -0.197 0.0883333333333333 9.7278214297715 4.41542225305054 -0.197 0.0883333333333334 0.106467696280898 0.361791013038008 -1.93446013225581 0.995568901044137 Q8IZ41 RASEF Q8IZ41.S719.p_RASEF Q8IZ41_S719s _1_1_719_719 Q8IZ41 Q8IZ41 Ras and EF-hand domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9600.9600.4 9.57 9.57 1.124 7 1 1 0 712.8817 2768.5357 S719s Hydrogen 712 (R) TDKDDSRsITNLTGTNSKK (S) T(0.0)DKDDS(0.0)RS(0.99)IT(0.0)NLT(0.0)GT(0.0)NS(0.0)KK K:TMT10-Lys-Only,s:Phosphorylated S RASEF 83619.4 2 6 1851.1 111.08 HUMAN 1 -9.7278 4.4154 TDKDQQPSGSEGEDD-p Q9NXG2;S86-p TDKDQQPSGSEGEDD 0.225596004363036 0.00292204333867921 -0.312 1.09033333333333 12.4140341095596 38.2620448174556 -0.312 1.09033333333333 0.0573583419890886 0.000149209171274684 -2.40599541474731 9.37647559167344 Q9NXG2 THUMPD1 Q9NXG2.S86.p_THUMPD1 Q9NXG2_S86s _1_1_86_86 Q9NXG2 Q9NXG2|H3BNW0 THUMP domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13112.13112.3 19.29 19.29 1.189 2 1 1 0 953.1303 2777.4044 S86s TMT10 82 (K) DQQPsGSEGEDDDAEAALKK (E) DQQPS(0.99)GS(0.0)EGEDDDAEAALKK K:TMT10,s:Phosphorylated S THUMPD1 39714.1 4 2 1805.1 113.76 HUMAN 1 -12.414 38.262 TDKLGLHSLRHRNWY-p P84077;S147-p TDKLGLHSLRHRNWY 0.213993143458835 0.498820552001293 -0.652333333333333 0.155666666666667 12.9029906289809 4.041592319045 -0.652333333333333 0.155666666666667 0.0512508340098387 0.394312702783884 -2.49360096151735 0.92491384739586 P84077 ARF1 P84077.S147.p_ARF1 P84077_S147s _1_1_147_147 P84077 P84077|P61204|P61204-2 ADP-ribosylation factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12323.12323.2 9.55 3.55 99 1 1 1 0 552.8105 1024.6465 S147s TMT10 143 (K) LGLHsLR (H) LGLHS(1.0)LR s:Phosphorylated S ARF1 20753.5 3 2 3770.1 43.5 HUMAN 1 -12.903 4.0416 TDLAKILSDMRSQYE-p P08727;S250-p TDLAKILSDMRSQYE 0.407362201994798 0.968918126000245 0.197666666666667 0.00966666666666665 7.2012587385796 0.19388863299827 0.197666666666667 0.0096666666666667 0.19049085282695 0.956337392082393 1.49619854499574 0.0573279314366928 P08727 KRT19 P08727.S250.p_KRT19 P08727_S250s _1_1_250_250 P08727 P08727 Keratin, type I cytoskeletal 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25054.25054.3 15.14 7.4 1.988 3 1 1 0 793.7054 2299.1372 S250s TMT10 248 (K) ILsDMRSQYEVMAEQNR (K) ILS(0.99)DMRS(0.0)QY(0.0)EVMAEQNR s:Phosphorylated S KRT19 44105.2 2 13 383.1 334.07 HUMAN 1 7.2013 0.1939 TDLCFLNSPIFKQKK-p Q5FBB7;S507-p TDLCFLNSPIFKQKK 0.0775211205486015 0.0141884945196519 0.79 -0.784666666666667 23.7876487208223 25.6303082992056 0.79 -0.784666666666667 0.00418056642106306 0.00273507456053217 4.74313437905009 -5.19850372547974 Q5FBB7 SGOL1 Q5FBB7.S507.p_SGOL1 Q5FBB7_S507s _1_1_507_507 Q5FBB7 Q5FBB7|Q5FBB7-6|Q5FBB7-2|Q5FBB7-3|Q5FBB7-4|Q5FBB7-5 Shugoshin 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.36837.36837.3 19.87 19.87 8.459 2 1 1 0 803.7356 2329.2303 S507s TMT10 496 (R) GDPFTDLCFLNsPIFK (Q) GDPFT(0.0)DLCFLNS(0.99)PIFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SGO1 65044.6 4 20 1140.1 173.27 HUMAN 1 23.7876 -25.6303 TDLCKDKSLVNKLRR-p O00212;S138-p TDLCKDKSLVNKLRR 0.0719549135296335 0.004664047284011 -0.393 -0.72 24.6567284032195 34.096418240899 -0.393 -0.72 0.003422371571304 0.000389366134742439 -4.95735872552746 -7.76742564072377 O00212 RHOD O00212.S138.p_RHOD O00212_S138s _1_1_138_138 O00212 O00212|E9PIG5 Rho-related GTP-binding protein RhoD HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10412.10412.3 9.09 9.09 99 1 1 1 0 524.3107 1490.9509 S138s TMT10 136 (K) DKsLVNK (L) DKS(1.0)LVNK K:TMT10,s:Phosphorylated S RHOD 23811.8 1 2 4065.1 38.25 HUMAN 1 -24.6567 -34.0964 TDLEREDSISRGRRS-p Q9P203;S1112-p TDLEREDSISRGRRS 0.128918631797654 0.0084962313920477 0.329333333333333 -0.453666666666667 18.4234909523793 29.3864051418405 0.329333333333333 -0.453666666666667 0.0143764250573779 0.00115175335449945 3.5484844836005 -6.23796435801096 Q9P203 BTBD7 Q9P203.S1112.p_BTBD7 Q9P203_S1112s _1_1_1112_1112 Q9P203 Q9P203|Q9P203-5 BTB/POZ domain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7321.7321.3 12.83 9.84 2.607 3 1 1 0 581.943 1663.8449 S1112s TMT10 1104 (R) NTDLEREDsISR (G) NT(0.0)DLEREDS(0.99)IS(0.0)R s:Phosphorylated S BTBD7 127507 1 3 2766.1 71.34 HUMAN 1 18.4235 -29.3864 TDLKSEISGDLARLI-p P08133;S422-p TDLKSEISGDLARLI 0.361495231283066 0.440897459608939 0.221666666666667 0.132666666666667 8.21473017428397 4.7368475189059 0.221666666666667 0.132666666666667 0.150843632627604 0.335981409814755 1.67239141971638 1.05540177635737 P08133 ANXA6 P08133.S422.p_ANXA6 P08133_S422s _1_1_422_422 P08133 P08133 Annexin A6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.28930.28930.3 10.99 10.99 1.312 3 1 1 0 768.0636 2222.2103 S422s TMT10 412 (R) DLMTDLKSEIsGDLAR (L) DLMT(0.0)DLKS(0.0)EIS(0.99)GDLAR K:TMT10,s:Phosphorylated S ANXA6 76214.3 1 7 1878.1 109.53 HUMAN 1 8.2147 4.7368 TDLNKRASLPAGLVG-p A6NDB9;S143-p TDLNKRASLPAGLVG 0.672048315140611 0.105764786101113 0.107666666666667 0.203333333333333 3.23385526605589 12.8902613108473 0.107666666666667 0.203333333333333 0.474913454380652 0.0514012722996709 0.767523561136865 2.48995890175404 A6NDB9 PALM3 A6NDB9.S143.p_PALM3 A6NDB9_S143sT151tS155s_3_3_143_155 A6NDB9 A6NDB9 Paralemmin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.31435.31636.4 16.83 16.83 1.666 4 3 3 0 917.696 3427.8535 S143s T151t S155s TMT10 141 (K) RAsLPAGLVGtPPEsPSEPREDVLGFLPGPR (Q) RAS(0.99)LPAGLVGT(0.99)PPES(0.99)PS(0.0)EPREDVLGFLPGPR s:Phosphorylated S,t:Phosphorylated T PALM3 72036.5 1 10 888.1 205.52 HUMAN 1 3.2339 12.8903 TDLQGSASPSKVEGV-p Q6VY07-2;S495-p TDLQGSASPSKVEGV 0.398002572398755 0.00250305172310792 -0.137 -1.073 7.38498754024865 39.7708536094162 -0.137 -1.073 0.182600198780101 0.000105417967613518 -1.52824907711136 -10.0287685585482 Q6VY07 PACS1 Q6VY07.2.S495.p_PACS1 Q6VY07-2_S495s _1_1_495_495 Q6VY07-2 Q6VY07-2|B4DF77 Isoform 2 of Phosphofurin acidic cluster sorting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9651.9651.5 22.18 22.18 1.155 7 1 1 0 607.928 2955.6467 S495s TMT10 485 (K) SSKTDLQGSAsPSKVEGVHTPR (Q) S(0.0)S(0.0)KT(0.0)DLQGS(0.0)AS(0.99)PS(0.0)KVEGVHT(0.0)PR K:TMT10,s:Phosphorylated S PACS1 109968.1 9 8 786.1 225.23 HUMAN 1 -7.385 -39.7709 TDNLLPMSPEEFDEV-p P42224;S727-p TDNLLPMSPEEFDEV 0.857856311166697 0.851462204469605 0.0303333333333333 -0.0286666666666667 1.29746876689299 0.981755345999145 0.0303333333333333 -0.0286666666666667 0.741742430987144 0.79767221627264 0.346916366895692 -0.269269209387259 P42224 STAT1 P42224.S727.p_STAT1 P42224_S727s _1_1_727_727 P42224 P42224 Signal transducer and activator of transcription 1-alpha/beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29809.30018.3 26.23 26.23 10.821 4 1 1 0 877.4144 2550.2595 S727s TMT10 717 (R) LQTTDNLLPMsPEEFDEVSR (I) LQT(0.0)T(0.0)DNLLPMS(0.99)PEEFDEVS(0.0)R s:Phosphorylated S STAT1 87903.7 6 3 2688.1 73.96 HUMAN 1 1.2975 -0.9818 TDNRARESSDSEEEY-p Q9BYW2;S458-p TDNRARESSDSEEEY 0.799321908925685 0.872888347980138 -0.054 0.0213333333333334 1.87300775495087 0.832539988564735 -0.054 0.0213333333333334 0.649679591641666 0.825554979241609 -0.480491346096493 0.231306448818033 Q9BYW2 SETD2 Q9BYW2.S458.p_SETD2 Q9BYW2_S458sS459sS461s_3_3_458_461 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9399.9399.5 8.39 8.39 7.035 4 3 3 0 497.8243 2245.1915 S458s S459s S461s TMT10 455 (R) AREssDsEEEYKK (T) ARES(0.99)S(0.99)DS(0.99)EEEY(0.0)KK K:TMT10,s:Phosphorylated S SETD2 290615.4 1 37 58.1 711.11 HUMAN 1 -1.873 0.8325 TDNWRKMSFEILRGS-p Q14674;S1501-p TDNWRKMSFEILRGS 0.596617076276074 0.00189367072219409 -0.106333333333333 -0.877 4.14080919157194 42.7477133622704 -0.106333333333333 -0.877 0.385406540778044 5.31164037937e-05 -0.943951504084857 -11.4390533804263 Q14674 ESPL1 Q14674.S1501.p_ESPL1 Q14674_S1501sS1508s_2_2_1501_1508 Q14674 Q14674|Q14674-2 Separin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26997.26997.5 19.51 16.16 2.339 6 2 2 0 936.8554 4520.3335 S1501s S1508s TMT10 1499 (R) KMsFEILRGsDGEDSASGGKTPAPGPEAASGEWELLR (L) KMS(0.99)FEILRGS(0.99)DGEDS(0.0)AS(0.0)GGKT(0.0)PAPGPEAAS(0.0)GEWELLR K:TMT10,s:Phosphorylated S ESPL1 236708.6 1 7 895.1 204.23 HUMAN 1 -4.1408 -42.7477 TDPNENFSAQGEDEW-p Q6P1M3;S480-p TDPNENFSAQGEDEW 0.601539136153653 0.0840626365687726 -0.084 0.190666666666667 4.07730078526633 14.236751074597 -0.0805900612714094 0.190666666666667 0.391083885619652 0.0376985713789627 -0.931877163807812 2.73481657652983 Q6P1M3 LLGL2 Q6P1M3.S480.p_LLGL2 Q6P1M3_S480s _1_1_480_480 Q6P1M3 Q6P1M3|J3QRV5|Q6P1M3-2 Lethal(2) giant larvae protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28347.28551.4 22.88 22.88 4.175 3 1 1 0 861.6703 3363.6898 S480s TMT10 468 (R) VFLTDTDPNENFsAQGEDEWPPLRK (V) VFLT(0.0)DT(0.0)DPNENFS(0.99)AQGEDEWPPLRK K:TMT10,s:Phosphorylated S LLGL2 114415.8 8 4 881.1 207.2 HUMAN 1 -4.0773 14.2368 TDPQGVGTPEMIPLD-p Q12802-2;T1149-p TDPQGVGTPEMIPLD 0.937693535615665 0.0220306453424827 0.02 -0.31 0.544092233057483 22.6414142938815 0.02 -0.31 0.882248191320148 0.00544325362679762 0.155253926943286 -4.46526561224202 Q12802 AKAP13 Q12802.2.T1149.p_AKAP13 Q12802-2_T1149t _1_1_1149_1149 Q12802-2 Q12802-2|Q12802-4 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30246.30246.3 18.73 18.73 8.552 2 1 1 0 907.7949 2641.3948 T1149t TMT10 1140 (K) AVTDPQGVGtPEMIPLDWEK (G) AVT(0.0)DPQGVGT(0.99)PEMIPLDWEK K:TMT10,t:Phosphorylated T AKAP13 310921 2 7 66.1 683.25 HUMAN 1 0.5441 -22.6414 TDPSKLDSGKELHIN-p P07900;S72-p TDPSKLDSGKELHIN 0.192652167830757 0.100131925393072 -0.245333333333333 0.201333333333333 13.9595750059479 13.2075119287241 -0.245333333333333 0.201333333333333 0.0401830131417655 0.0477802928360299 -2.68549938511423 2.54710331637231 P07900 HSP90AA1 P07900.S72.p_HSP90AA1 P07900_S72s _1_1_72_72 P07900 P07900-2|P08238|Q58FF7 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17068.17068.4 8.71 3.97 2.261 5 1 1 0 644.8542 2496.4277 S72s TMT10 59 (K) IRYESLTDPSKLDsGK (E) IRY(0.0)ES(0.0)LT(0.0)DPS(0.0)KLDS(0.99)GK K:TMT10,s:Phosphorylated S HSP90AA1 85057.6 2 2 43.1 810.87 HUMAN 1 -13.9596 13.2075 TDPVRCNSLEEIKAL-p A0A0D9SGF6;S2127-p TDPVRCNSLEEIKAL 0.137689822550301 0.178891528287527 0.266 -0.196333333333333 17.6263386921689 9.82887346149315 0.266 -0.196333333333333 0.0172729346841008 0.104018995098977 3.38703432776818 -1.95122081454656 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.S2127.p_SPTAN1 A0A0D9SGF6_S2127s _1_1_2127_2127 A0A0D9SGF6 A0A0D9SGF6|Q13813-2|A0A0D9SF54 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33982.33982.4 8.08 8.08 2.453 4 1 1 0 953.2029 3729.8107 S2127s TMT10 2105 (K) ASAFNSWFENAEEDLTDPVRCNsLEEIK (A) AS(0.0)AFNS(0.0)WFENAEEDLT(0.0)DPVRCNS(0.99)LEEIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SPTAN1 288398.5 1 20 263.1 396.39 HUMAN 1 17.6263 -9.8289 TDPWALNSPHHKLPS-p Q9H201;S393-p TDPWALNSPHHKLPS 0.105646757181022 0.0152649946430302 -0.509666666666667 -0.586666666666667 20.5612095024831 25.1264256276964 -0.509666666666667 -0.586666666666667 0.00878777744694003 0.00307154892417708 -4.00044058634933 -5.06949880902295 Q9H201 EPN3 Q9H201.S393.p_EPN3 Q9H201_S393s _1_1_393_393 Q9H201 Q9H201 Epsin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21554.21554.5 17.64 17.64 4.862 4 1 1 0 575.104 2791.5296 S393s TMT10 376 (R) TPVLPAGPPTTDPWALNsPHHK (L) T(0.0)PVLPAGPPT(0.0)T(0.0)DPWALNS(0.99)PHHK K:TMT10,s:Phosphorylated S EPN3 68392.2 2 9 953.1 196.01 HUMAN 1 -20.5612 -25.1264 TDQDDPSSSDDEGMP-p Q5JSH3;S471-p TDQDDPSSSDDEGMP 0.965110779182277 0.0476008280784193 0.00666666666666666 0.256333333333333 0.296777303409206 17.6877426277291 0.00666666666666666 0.256333333333333 0.933947082251292 0.0170304348491477 0.0868064799845457 3.39662372706532 Q5JSH3 WDR44 Q5JSH3.S471.p_WDR44 Q5JSH3_S470sS471sS472s_3_3_470_472 Q5JSH3 Q5JSH3|Q5JSH3-2|Q5JSH3-4 WD repeat-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18625.18838.5 21.8 21.8 7.87 7 3 3 0 802.3434 3767.7859 S470s S471s S472s TMT10 456 (K) SVRDEVFHTDQDDPsssDDEGMPYTRPVK (F) S(0.0)VRDEVFHT(0.0)DQDDPS(0.99)S(0.99)S(0.99)DDEGMPY(0.0)T(0.0)RPVK K:TMT10,s:Phosphorylated S WDR44 101935 6 21 95.1 607.92 HUMAN 1 0.2968 17.6877 TDQGRSRSMLEVPRS-p E9PKC0;S556-p TDQGRSRSMLEVPRS 0.924244864824156 0.218392877705801 0.02 -0.161666666666667 0.67503865587753 8.69566103138317 0.02 -0.161666666666667 0.856044092170633 0.135031128389658 0.190253741917319 -1.75507313091375 E9PKC0 PLEKHA7 E9PKC0.S556.p_PLEKHA7 E9PKC0_S556s _1_1_556_556 E9PKC0 E9PKC0|Q6IQ23-2|Q6IQ23-3 Pleckstrin homology domain-containing family A member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15575.15575.2 9.73 5.71 99 1 1 1 0 570.7888 1060.6022 S556s TMT10 556 (R) sMLEVPR (S) S(1.0)MLEVPR s:Phosphorylated S PLEKHA7 144991.9 4 6 809.1 221.2 HUMAN 1 0.675 -8.6957 TDQNSDGYCQTGTMS-p P15924;Y56-p TDQNSDGYCQTGTMS 0.134738301810513 0.35213804962252 0.941666666666667 0.232 17.8668256976872 6.00950447203105 0.941666666666667 0.232 0.016342459984059 0.250639521523741 3.43536339339772 1.28595019264747 P15924 DSP P15924.Y56.p_DSP P15924_Y56y _1_1_56_56 P15924 P15924|P15924-3|P15924-2 Desmoplakin GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8995.8995.3 15.95 12.8 2.758 6 1 1 0 852.3777 2475.1554 Y56y TMT10 45 (R) RGVITDQNSDGyCQTGTMSR (H) RGVIT(0.0)DQNS(0.0)DGY(0.99)CQT(0.0)GT(0.0)MS(0.0)R C:Carbamidomethylation,y:Phosphorylated Y DSP 334221.3 3 1 223.1 15.95 HUMAN 1 17.8668 6.0095 TDRGTDDSPKDSQED-p Q969E4;S121-p TDRGTDDSPKDSQED 0.198300279868763 0.00295295766305267 0.221333333333333 0.842333333333333 13.6841666140512 38.122144608056 0.221333333333333 0.842333333333333 0.0428137568822904 0.00015409393272333 2.63511176625962 9.31798020660591 Q969E4 TCEAL3 Q969E4.S121.p_TCEAL3 Q969E4_S121s _1_1_121_121 Q969E4 Q5H9L2|Q969E4|Q6IPX3|Q6IPX3-2 Transcription elongation factor A protein-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7563.7563.2 15.83 9.72 3.272 3 1 1 0 1179.5466 2278.1199 S121s TMT10 117 (R) GTDDsPKDSQEDLQER (H) GT(0.0)DDS(0.99)PKDS(0.0)QEDLQER K:TMT10,s:Phosphorylated S TCEAL3 22616 12 5 943.1 197.95 HUMAN 1 13.6842 38.1221 TDRNFSNSPGPYVFC-p Q8NAP3;S130-p TDRNFSNSPGPYVFC 0.914687993198443 0.320273560676248 -0.016 0.104333333333333 0.759114289349969 6.53982996105423 -0.016 0.104333333333333 0.83963120547427 0.221828327035448 -0.21231315636181 1.37984075807657 Q8NAP3 ZBTB38 Q8NAP3.S130.p_ZBTB38 Q8NAP3_S130s _1_1_130_130 Q8NAP3 Q8NAP3 Zinc finger and BTB domain-containing protein 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27549.27549.3 9.5 9.5 1.645 4 1 1 0 800.0584 2318.1891 S130s TMT10 126 (R) NFSNsPGPYVFCITEK (G) NFS(0.0)NS(0.99)PGPY(0.0)VFCIT(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZBTB38 136651.1 2 1 3033.1 62.6 HUMAN 1 -0.7591 6.5398 TDSEVSQSPAKNGSK-p O75175;S299-p TDSEVSQSPAKNGSK 0.461449271051433 0.0124583526178504 -0.103666666666667 -0.983666666666667 6.19373265058261 26.5780680609009 -0.103666666666667 -0.983666666666667 0.240229719914284 0.00219883779817319 -1.31900296970725 -5.44751468879917 O75175 CNOT3 O75175.S299.p_CNOT3 O75175_S299s _1_1_299_299 O75175 O75175|H7C3F5 CCR4-NOT transcription complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6844.6844.2 12.89 9.57 2.228 5 1 1 0 887.4375 1693.9009 S299s TMT10 291 (R) STDSEVSQsPAK (N) S(0.0)T(0.0)DS(0.0)EVS(0.0)QS(0.99)PAK K:TMT10,s:Phosphorylated S CNOT3 82098.7 3 1 3113.1 60.34 HUMAN 1 -6.1937 -26.5781 TDSKSLRSVNGSRRN-p O60447-2;S105-p TDSKSLRSVNGSRRN 0.80894448179027 0.154698925808282 0.0483333333333333 0.356 1.76930340747877 10.6586473887341 0.0483333333333333 0.356 0.665379872149622 0.0859281103151667 0.4570840538225 2.09549810956521 O60447 EVI5 O60447.2.S105.p_EVI5 O60447-2_S105s _1_1_105_105 O60447-2 O60447-2 Isoform 2 of Ecotropic viral integration site 5 protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4493.4493.3 9.83 2.71 1.448 3 1 1 0 428.8923 1204.6959 S105s TMT10 102 (K) SLRsVNGSR (R) S(0.0)LRS(0.99)VNGS(0.0)R s:Phosphorylated S EVI5 94702 1 1 2708.1 73.26 HUMAN 1 1.7693 10.6586 TDSLGGLSPSEVTAI-p O60318;S430-p TDSLGGLSPSEVTAI 0.330275298399303 0.614150887775922 0.135666666666667 0.0613333333333333 8.99118451854254 2.87862387100319 0.135666666666667 0.0613333333333334 0.126148342377131 0.515391928586352 1.80683679681134 0.695554363074328 O60318 MCM3AP O60318.S430.p_MCM3AP O60318_S430s _1_1_430_430 O60318 O60318 Germinal-center associated nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19678.19678.3 17.64 17.64 1.318 8 1 1 0 1063.8555 3109.5836 S430s TMT10 416 (R) QSNRSESTDSLGGLsPSEVTAIQCK (N) QS(0.0)NRS(0.0)ES(0.0)T(0.0)DS(0.0)LGGLS(0.99)PS(0.0)EVT(0.0)AIQCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MCM3AP 220797 5 3 653.1 254.06 HUMAN 1 8.9912 2.8786 TDSQSWRSPLKALSE-p O75369-8;S1474-p TDSQSWRSPLKALSE 0.0304032852631674 0.0010212605030329 -0.646333333333333 -1.47666666666667 35.4859353437981 51.6183498759246 -0.646333333333334 -1.47666666666667 0.000282752507893361 6.88914003018373e-06 -8.29120291181258 -16.8291023289373 O75369 FLNB O75369.8.S1474.p_FLNB O75369-8_S1474s _1_1_1474_1474 O75369-8 O75369-8 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12933.12973.3 14.39 14.39 1.127 4 1 1 0 715.3524 2064.0762 S1474s TMT10 1464 (R) ADDTDSQSWRsPLK (A) ADDT(0.0)DS(0.0)QS(0.0)WRS(0.99)PLK K:TMT10,s:Phosphorylated S FLNB 283797.6 1 25 67.1 680.07 HUMAN 1 -35.4859 -51.6183 TDSSLPFSFPDELPN-p Q8NCE2;S580-p TDSSLPFSFPDELPN 0.335167066678141 0.050124945718593 -0.134333333333333 -0.234666666666667 8.8557438055948 17.3727171377954 -0.134333333333333 -0.234666666666667 0.130144440127401 0.018311684042037 -1.7833917274587 -3.3337987496741 Q8NCE2 MTMR14 Q8NCE2.S580.p_MTMR14 Q8NCE2_S580s _1_1_580_580 Q8NCE2 Q8NCE2 Myotubularin-related protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34119.34119.4 22.53 22.53 3.301 7 1 1 0 967.7251 3787.9163 S580s TMT10 569 (R) AVLHTDSSLPFsFPDELPNSCLLAALSDRETR (L) AVLHT(0.0)DS(0.0)S(0.0)LPFS(0.99)FPDELPNS(0.0)CLLAALS(0.0)DRET(0.0)R C:Carbamidomethylation,s:Phosphorylated S MTMR14 73057.9 2 5 1808.1 113.5 HUMAN 1 -8.8557 -17.3727 TDSSSYPSPCASPSP-p Q9H6S0;S1263-p TDSSSYPSPCASPSP 0.766023104823569 0.945865362049737 -0.0426666666666667 -0.00699999999999997 2.22139221017743 0.346524227254365 -0.0426666666666667 -0.00699999999999997 0.599598833100945 0.923310080828941 -0.557291279143326 -0.100828578340949 Q9H6S0 YTHDC2 Q9H6S0.S1263.p_YTHDC2 Q9H6S0_S1263sS1267s_2_2_1263_1267 Q9H6S0 Q9H6S0 Probable ATP-dependent RNA helicase YTHDC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11717.11717.3 16.69 13.77 1.129 11 2 2 0 901.0551 2541.2179 S1263s S1267s TMT10 1255 (K) STDSSSYPsPCAsPSPPSSGK (G) S(0.0)T(0.0)DS(0.0)S(0.0)S(0.0)Y(0.0)PS(0.99)PCAS(0.99)PS(0.0)PPS(0.0)S(0.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S YTHDC2 161671.9 3 20 668.1 249.65 HUMAN 1 -2.2214 -0.3465 TDTESEASILGDSGE-p J3KQ48;S58-p TDTESEASILGDSGE 0.1121688641946 0.00773564910804752 0.302333333333333 -0.515666666666667 19.8495605121675 30.14683603456 0.302333333333333 -0.515666666666667 0.0103524692403305 0.000966754932434421 3.84673856438739 -6.46660735672395 J3KQ48 PTRH2 J3KQ48.S58.p_PTRH2 J3KQ48_S58s _1_1_58_58 J3KQ48 J3KQ48|Q9Y3E5 Peptidyl-tRNA hydrolase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15041.15041.3 23.96 23.96 5.389 7 1 1 0 860.0706 2498.2299 S58s TMT10 49 (K) THTDTESEAsILGDSGEYK (M) T(0.0)HT(0.0)DT(0.0)ES(0.0)EAS(0.99)ILGDS(0.0)GEY(0.0)K K:TMT10,s:Phosphorylated S PTRH2 19609.7 2 1 5008.1 23.96 HUMAN 1 19.8496 -30.1468 TDTKGALSPITDNTE-p Q08AD1;S611-p TDTKGALSPITDNTE 0.0990612726298986 0.137730858633273 -0.358666666666667 -0.182 21.2387043652078 11.3463021105747 -0.358666666666667 -0.182 0.00751847159830631 0.0733448777340446 -4.1499776398694 -2.21585801791295 Q08AD1 CAMSAP2 Q08AD1.S611.p_CAMSAP2 Q08AD1_S611s_1_1_611_611 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30430.30430.4 15.4 11.47 1.103 13 1 1 0 1456.4143 5741.6734 S611s N616n TMT10 608 (K) GALsPITDnTEVDTGIHVPSEDIPETMDEDSSLRDYTVSLDSDMDDASK (F) GALS(0.99)PIT(0.0)DN(1.0)T(0.0)EVDT(0.0)GIHVPS(0.0)EDIPET(0.0)MDEDS(0.0)S(0.0)LRDY(0.0)T(0.0)VS(0.0)LDS(0.0)DMDDAS(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated CAMSAP2 169284 3 7 28.2 931.95 HUMAN 1 -21.2387 -11.3463 TDTRDDISILATGCK-p Q12888-2;S603-p TDTRDDISILATGCK 0.805230313820364 0.00759823237991491 -0.0533333333333333 0.774333333333333 1.81264196092113 30.2609843236816 -0.0533333333333334 0.774333333333333 0.658773019308513 0.000941676142468958 -0.466898533727606 6.50149978552193 Q12888 TP53BP1 Q12888.2.S603.p_TP53BP1 Q12888-2_S603s _1_1_603_603 Q12888-2 Q12888-3|A6NNK5|Q12888-2 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16010.16010.4 9.29 6.06 1.703 5 1 1 0 738.1251 2869.518 S603s TMT10 591 (K) TKGDDTDTRDDIsILATGCK (G) T(0.0)KGDDT(0.0)DT(0.0)RDDIS(0.99)ILAT(0.0)GCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TP53BP1 216167.2 3 29 3.1 2297.07 HUMAN 1 -1.8126 30.261 TDTSEEGSPRENPRE-p A0A0J9YWL0;S185-p TDTSEEGSPRENPRE 0.337963113037878 0.446900977217435 0.177 -0.078 8.77224741593281 4.66131631335174 0.177 -0.078 0.132670772653102 0.341875806867156 1.76893864053872 -1.04141161280288 A0A0J9YWL0 NotFound A0A0J9YWL0.S185.p_NotFound A0A0J9YWL0_S185s _1_1_185_185 A0A0J9YWL0 A0A0J9YWL0 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2995.2995.2 14.83 11.31 5.035 4 1 1 0 758.3327 1435.6862 S185s TMT10 177 (K) QTDTSEEGsPR (E) QT(0.0)DT(0.0)S(0.0)EEGS(0.99)PR s:Phosphorylated S CRYBG1 233643.7 2 4 79.1 640.71 HUMAN 1 8.7722 -4.6613 TDVAQPPSDSDAVGP-p Q8N554;S312-p TDVAQPPSDSDAVGP 0.984881425304601 0.125851360418095 0.00299999999999999 -0.168 0.133346918451753 11.8700961413817 0.00299999999999999 -0.168 0.969762325600529 0.0650115298340091 0.0396915476436796 -2.30817722705403 Q8N554 ZNF276 Q8N554.S312.p_ZNF276 Q8N554_S312s _1_1_312_312 Q8N554 Q8N554|Q8N554-2|H3BTT0 Zinc finger protein 276 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15908.15908.3 14.99 14.99 2.274 5 1 1 0 773.7067 2239.1404 S312s TMT10 301 (K) TLPSTDVAQPPsDSDAVGPR (S) T(0.0)LPS(0.0)T(0.0)DVAQPPS(0.99)DS(0.0)DAVGPR s:Phosphorylated S ZNF276 68758.2 1 3 3532.1 48.89 HUMAN 1 0.1333 -11.8701 TDVEGRLSALLQETK-p O60763-2;S862-p TDVEGRLSALLQETK 0.140621777582522 0.0128644636045059 -0.287 -0.474666666666667 17.433414101 26.3355418543246 -0.287 -0.474666666666667 0.0180575401805786 0.00232512237023468 -3.34849302534484 -5.38298594031436 O60763 USO1 O60763.2.S862.p_USO1 O60763-2_S862s _1_1_862_862 O60763-2 O60763-2 Isoform 2 of General vesicular transport factor p115 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25313.25313.4 13.48 11.61 4.91 4 1 1 0 575.5639 2219.2647 S862s TMT10 854 (K) TTDVEGRLsALLQETK (E) T(0.0)T(0.0)DVEGRLS(0.99)ALLQET(0.0)K K:TMT10,s:Phosphorylated S USO1 110105.5 2 1 2134.1 96.34 HUMAN 1 -17.4334 -26.3355 TDVPKWISIMTERSV-p P07355;S215-p TDVPKWISIMTERSV 0.238268113107614 0.00610722006685881 -0.188 0.544333333333333 11.9174704541788 31.9239699987999 -0.188 0.544333333333333 0.0643062159460713 0.000642100488202749 -2.31770466387575 7.02744588862681 P07355 ANXA2 P07355.S215.p_ANXA2 P07355_S215s _1_1_215_215 P07355 P07355-2|A6NMY6|H0YMU9 Annexin A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27011.27011.2 8.29 4.78 1.975 2 1 1 0 672.8329 1264.6921 S215s TMT10 213 (K) WIsIMTER (S) WIS(0.99)IMT(0.0)ER s:Phosphorylated S ANXA2 38831.6 1 16 537.1 277.57 HUMAN 1 -11.9175 31.924 TDVSHKASPEDGQEG-p Q9Y6J0;S1695-p TDVSHKASPEDGQEG 0.908650958577574 0.062291427146846 -0.0173333333333333 0.239666666666667 0.818099179960649 16.045340977629 -0.0173333333333333 0.239666666666667 0.828304616742631 0.0248579838907614 -0.227606788089421 3.0747208499524 Q9Y6J0 CABIN1 Q9Y6J0.S1695.p_CABIN1 Q9Y6J0_S1695s _1_1_1695_1695 Q9Y6J0 Q9Y6J0|A0A087WWW8|Q9Y6J0-2|B5MEB3 Calcineurin-binding protein cabin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13297.13297.5 16.69 11.75 3.538 4 1 1 0 624.7186 3039.6024 S1695s TMT10 1686 (R) MTTDVSHKAsPEDGQEGLPQPK (K) MT(0.0)T(0.0)DVS(0.0)HKAS(0.99)PEDGQEGLPQPK K:TMT10,s:Phosphorylated S CABIN1 248858 2 7 763.1 229.21 HUMAN 1 -0.8181 16.0453 TDVSSKNTPDSKKIS-p Q03188;T130-p TDVSSKNTPDSKKIS 0.202247703341141 0.000952253650599092 -0.252333333333333 -1.81466666666667 13.4723451758801 61.4703941116376 -0.252333333333333 -1.81466666666667 0.0449537040820226 7.12788343389818e-07 -2.59653956002208 -25.691515337052 Q03188 CENPC Q03188.T130.p_CENPC Q03188_T130t _1_1_130_130 Q03188 Q03188|Q03188-2 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15863.15863.4 19.24 19.24 2.183 5 1 1 0 586.5745 2263.3112 T130t TMT10 120 (K) ILATDVSSKNtPDSK (K) ILAT(0.0)DVS(0.0)S(0.0)KNT(0.99)PDS(0.0)K K:TMT10,t:Phosphorylated T CENPC 107459.5 5 7 209.1 442.77 HUMAN 1 -13.4723 -61.4704 TDWSDNDSDYEIDDQ-p Q659C4;S436-p TDWSDNDSDYEIDDQ 0.918430174900821 0.340011292838934 -0.0173333333333333 0.118666666666667 0.719747407026413 6.20636705500145 -0.0173333333333334 0.118666666666667 0.847276691744685 0.239531864213137 -0.202023042651138 1.32091964020258 Q659C4 LARP1B Q659C4.S436.p_LARP1B Q659C4_S432sS436s_2_2_432_436 Q659C4 Q659C4|Q659C4-2 La-related protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26367.26573.3 17.32 17.32 2.003 5 2 2 0 1090.1155 3108.3958 S432s S436s TMT10 426 (K) NTFTDWsDNDsDYEIDDQDLNK (I) NT(0.0)FT(0.0)DWS(0.99)DNDS(0.99)DY(0.0)EIDDQDLNK K:TMT10,s:Phosphorylated S LARP1B 105833.8 3 14 551.1 274.41 HUMAN 1 -0.7197 6.2064 TDYKTSESTGSLPSP-p O95456;S180-p TDYKTSESTGSLPSP 0.288811511520225 0.0637261520224248 -0.187333333333333 0.248 10.1719401606776 15.9211577017703 -0.187333333333333 0.248 0.0961182785094356 0.025579039338145 -2.01159880729601 3.05092371293141 O95456 PSMG1 O95456.S180.p_PSMG1 O95456_S180s _1_1_180_180 O95456 O95456|O95456-2 Proteasome assembly chaperone 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21885.21885.2 10.86 10.86 1.126 6 1 1 0 894.4446 1707.9115 S180s TMT10 177 (K) TSEsTGSLPSPFLR (A) T(0.0)S(0.0)ES(0.99)T(0.0)GS(0.0)LPS(0.0)PFLR s:Phosphorylated S PSMG1 33652.1 2 2 3489.1 49.83 HUMAN 1 -10.1719 15.9212 TEALGEKSPDSATVS-p Q6WCQ1-2;S977-p TEALGEKSPDSATVS 0.975009344981545 0.686160480672727 -0.00466666666666667 0.0503333333333334 0.214315511619431 2.23872892428884 -0.00466666666666667 0.0503333333333334 0.951849856656265 0.597210050055741 -0.0632346160867031 0.560976334597626 Q6WCQ1 MPRIP Q6WCQ1.2.S977.p_MPRIP Q6WCQ1-2_S977s _1_1_977_977 Q6WCQ1-2 Q6WCQ1-2|Q6WCQ1-3 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.21453.21453.3 19.6 19.6 1.353 6 1 1 0 1036.8641 3028.6116 S977s TMT10 968 (K) AATEALGEKsPDSATVSGYDIMK (S) AAT(0.0)EALGEKS(0.99)PDS(0.0)AT(0.0)VS(0.0)GY(0.0)DIMK K:TMT10,s:Phosphorylated S MPRIP 118899.7 4 16 204.1 449.03 HUMAN 1 -0.2143 2.2387 TEAPAVVTEEEDDDE-p Q13177;T169-p TEAPAVVTEEEDDDE 0.780995115911564 0.155609846430403 0.047 0.154666666666667 2.06231445603359 10.6243730443866 0.047 0.154666666666667 0.621968735265397 0.0866089344608684 0.522558221944797 2.08952039283072 Q13177 PAK2 Q13177.T169.p_PAK2 Q13177_T169t _1_1_169_169 Q13177 Q13177 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16634.16670.4 28.71 24.71 6.651 4 1 1 0 964.217 3773.8758 T169t TMT10 161 (K) GTEAPAVVtEEEDDDEETAPPVIAPRPDHTK (S) GT(0.0)EAPAVVT(0.99)EEEDDDEET(0.0)APPVIAPRPDHT(0.0)K K:TMT10,t:Phosphorylated T PAK2 58326.8 2 26 272.1 393.22 HUMAN 1 2.0623 10.6244 TEAQAQVSPPPPYPA-p Q6UUV7;S443-p TEAQAQVSPPPPYPA 0.992697145713664 0.278845732633224 0.00266666666666668 0.105 0.0677620715387567 7.3067416568107 0.00266666666666668 0.105 0.984518299389958 0.185919881677854 0.0203174235021231 1.51417019281276 Q6UUV7 CRTC3 Q6UUV7.S443.p_CRTC3 Q6UUV7_S443s _1_1_443_443 Q6UUV7 Q6UUV7|Q6UUV7-3 CREB-regulated transcription coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33720.33720.4 21.21 21.21 2.966 6 1 1 0 1041.5442 4083.1752 S443s TMT10 429 (R) SQLSFLPTEAQAQVsPPPPYPAPQELTQPLLQQPR (A) S(0.0)QLS(0.0)FLPT(0.0)EAQAQVS(0.99)PPPPY(0.0)PAPQELT(0.0)QPLLQQPR s:Phosphorylated S CRTC3 67129.2 2 7 1297.1 156.77 HUMAN 1 0.0678 7.3067 TECHLLDSPGLNCSN-p Q15398;S806-p TECHLLDSPGLNCSN 0.976787550479431 0.427755326340222 0.005 -0.0766666666666667 0.201067828190412 4.90998764285693 0.00500000000000002 -0.0766666666666667 0.954757804625576 0.322850330788059 0.0594101690761687 -1.08732034737207 Q15398 DLGAP5 Q15398.S806.p_DLGAP5 Q15398_S806s _1_1_806_806 Q15398 Q15398|Q15398-1 Disks large-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27027.27027.4 24.43 23.41 2.846 6 1 1 0 800.3742 3118.5135 S806s TMT10 796 (K) SLTTECHLLDsPGLNCSNPFTQLER (R) S(0.0)LT(0.0)T(0.0)ECHLLDS(0.99)PGLNCS(0.0)NPFT(0.0)QLER C:Carbamidomethylation,s:Phosphorylated S DLGAP5 95797.9 2 12 355.1 348.78 HUMAN 1 0.2011 -4.91 TECRRASSPSLIERN-p A1L170-2;S266-p TECRRASSPSLIERN 0.568633177625559 0.0535045410167382 0.0883333333333333 0.225666666666667 4.51019285805642 16.9574446634353 0.0883333333333333 0.225666666666667 0.353981621398709 0.0201490944966692 1.01348097976869 3.2517877780445 A1L170 C1orf226 A1L170.2.S266.p_C1orf226 A1L170-2_S266s_1_1_266_266 A1L170-2 A1L170-2 Isoform 2 of Uncharacterized protein C1orf226 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12523.12523.4 15.19 9.87 1.113 3 1 1 0 526.0355 2020.1704 S266s N273n TMT10 263 (R) RASsPSLIERnGFK (L) RAS(0.0)S(0.99)PS(0.0)LIERN(1.0)GFK K:TMT10,s:Phosphorylated S,n:Deamidated C1orf226 33805.4 4 5 1114.1 175.67 HUMAN 1 4.5102 16.9574 TEDEEEKSQEDQEQK-p P25205-2;S726-p TEDEEEKSQEDQEQK 0.738184634617349 0.0302131588935149 0.0571666666666667 0.606333333333333 2.50055181033323 20.5612452225773 0.0571666666666667 0.606333333333334 0.562269879189022 0.00878770516903639 0.617005752902434 3.99657393519982 P25205 MCM3 P25205.2.S726.p_MCM3 P25205-2_T719tS726s_2_2_719_726 P25205-2 P25205-2|J3KQ69 Isoform 2 of DNA replication licensing factor MCM3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7370.7370.4 10.88 10.88 2.661 4 2 2 0 844.6125 3215.4802 T719t S726s TMT10 713 (R) SEDESEtEDEEEKsQEDQEQK (R) S(0.0)EDES(0.0)ET(0.99)EDEEEKS(0.99)QEDQEQK K:TMT10,t:Phosphorylated T,s:Phosphorylated S MCM3 96534.2 1 10 136.1 528.96 HUMAN 2 2.5006 20.5612 TEDEGLISFEEERAQ-p A0A087WXK5;S2450-p TEDEGLISFEEERAQ 0.219124483613102 0.0178038368389318 -0.353 0.390333333333333 12.6976256858056 24.0969702881569 -0.353 0.390333333333333 0.0537325475171443 0.00389316644165173 -2.45672077142588 4.81291696171549 A0A087WXK5 NotFound A0A087WXK5.S2450.p_NotFound A0A087WXK5_S2450s _1_1_2450_2450 A0A087WXK5 A0A087WXK5|Q9BZC7-3|J3QSS3 ATP-binding cassette sub-family A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28267.28267.3 19.53 19.53 1.717 2 1 1 0 1010.7899 2950.3891 S2450s TMT10 2432 (R) ALVADEPEDLDTEDEGLIsFEEER (A) ALVADEPEDLDT(0.0)EDEGLIS(0.99)FEEER s:Phosphorylated S ABCA2 275398.6 1 10 1069.1 180.75 HUMAN 1 -12.6976 24.097 TEDENKQSFLDGGKG-p Q8NFQ8;S93-p TEDENKQSFLDGGKG 0.391198751974399 0.00514105543927642 -0.343333333333333 -0.701666666666667 7.52409758078469 33.3142618000304 -0.343333333333333 -0.701666666666667 0.17684396431081 0.00046620166474607 -1.5524771380512 -7.49376468505679 Q8NFQ8 TOR1AIP2 Q8NFQ8.S93.p_TOR1AIP2 Q8NFQ8_S93s _1_1_93_93 Q8NFQ8 Q8NFQ8 Torsin-1A-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13499.13499.4 14.6 14.6 6.363 2 1 1 0 702.6234 2727.4971 S93s TMT10 84 (K) DKTEDENKQsFLDGGK (G) DKT(0.0)EDENKQS(0.99)FLDGGK K:TMT10,s:Phosphorylated S TOR1AIP2 51490.6 1 2 2317.1 88.08 HUMAN 1 -7.5241 -33.3143 TEDGMQESP______-p Q96QG7;S548-p TEDGMQESP______ 0.384620913819272 0.623779163113231 0.119666666666667 -0.0543333333333333 7.68228975458245 2.7874397115864 0.119666666666667 -0.0543333333333333 0.170518311892564 0.52632745982441 1.57999295436078 -0.676806833056592 Q96QG7 MTMR9 Q96QG7.S548.p_MTMR9 Q96QG7_S548s _1_1_548_548 Q96QG7 Q96QG7|Q96QG7-2 Myotubularin-related protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21624.21624.2 7.5 7.5 5.799 2 1 1 0 993.4333 1905.8949 S548s TMT10 535 (R) QLAELETEDGMQEsP (-) QLAELET(0.0)EDGMQES(0.99)P s:Phosphorylated S MTMR9 64202.1 1 2 6415.1 11.83 HUMAN 1 7.6823 -2.7874 TEDIFPVTPPELEET-p Q5T3J3;T732-p TEDIFPVTPPELEET 0.0653854680586197 0.0242864145896889 0.393666666666667 0.307666666666667 25.6012816586036 22.001990171124 0.393666666666667 0.307666666666667 0.00275341601511831 0.00630668272095887 5.19769269944311 4.31781793317532 Q5T3J3 LRIF1 Q5T3J3.T732.p_LRIF1 Q5T3J3_T732t _1_1_732_732 Q5T3J3 Q5T3J3|Q5T3J3-2 Ligand-dependent nuclear receptor-interacting factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29346.29346.4 20.98 17.96 8.142 4 1 1 0 794.1494 3093.6032 T732t TMT10 723 (K) NYTEDIFPVtPPELEETIRDEK (I) NY(0.0)T(0.0)EDIFPVT(0.99)PPELEET(0.0)IRDEK K:TMT10,t:Phosphorylated T LRIF1 84794.8 3 4 2449.1 83.03 HUMAN 1 25.6013 22.002 TEDLKALSSEEEEEM-p A1L390;S576-p TEDLKALSSEEEEEM 0.906237367139803 0.0930084526114289 -0.0203333333333333 0.187 0.840170109847426 13.6431565485606 -0.0203333333333333 0.187 0.824105834781677 0.0432199584609936 -0.233291848173169 2.62610488910181 A1L390 PLEKHG3 A1L390.S576.p_PLEKHG3 A1L390_S576sS577s_2_2_576_577 A1L390 A1L390|A1L390-3|A1L390-2|G3V311 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.36866.36866.4 19.82 15.52 3.918 5 2 2 0 1015.2189 3897.9113 S576s S577s TMT10 574 (K) ALssEEEEEMGGAAQEPESLLPPSVLDQASVIAER (F) ALS(0.99)S(0.99)EEEEEMGGAAQEPES(0.0)LLPPS(0.0)VLDQAS(0.0)VIAER s:Phosphorylated S PLEKHG3 135322.7 4 29 284.1 386.18 HUMAN 1 -0.8402 13.6432 TEDLSPPSPPLPKEN-p Q13127;S864-p TEDLSPPSPPLPKEN 0.633204865850603 0.287469928434739 0.0693333333333333 0.113666666666667 3.69594360701812 7.14293565426176 0.0693333333333333 0.113666666666667 0.426978138307768 0.19306628262016 0.858543635959412 1.48559200919214 Q13127 REST Q13127.S864.p_REST Q13127_S864s _1_1_864_864 Q13127 Q13127|Q13127-4 RE1-silencing transcription factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21553.21553.2 19.59 16.29 1.852 5 1 1 0 1159.6038 2238.227 S864s TMT10 853 (K) ESVSTEDLSPPsPPLPK (E) ES(0.0)VS(0.0)T(0.0)EDLS(0.0)PPS(0.99)PPLPK K:TMT10,s:Phosphorylated S REST 123239.4 3 56 240.5 415.72 HUMAN 1 3.6959 7.1429 TEDRKKASLVALPEQ-p Q9UKV3;S400-p TEDRKKASLVALPEQ 0.306735184126758 0.20090220225381 -0.150333333333333 0.195333333333333 9.60273268122087 9.16973546460245 -0.150333333333333 0.195333333333333 0.109578848374305 0.121067187517636 -1.91276636443078 1.83707445448678 Q9UKV3 ACIN1 Q9UKV3.S400.p_ACIN1 Q9UKV3_S400s _1_1_400_400 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23288.23288.5 25.34 25.34 10.714 5 1 1 0 735.6225 3594.1176 S400s TMT10 397 (R) KKAsLVALPEQTASEEETPPPLLTK (E) KKAS(0.99)LVALPEQT(0.0)AS(0.0)EEET(0.0)PPPLLT(0.0)K K:TMT10,s:Phosphorylated S ACIN1 152258.2 2 11 32.2 899.18 HUMAN 1 -9.6027 9.1697 TEDTAEYSPFKGGYT-p P10275;S310-p TEDTAEYSPFKGGYT 0.114688242267433 0.00250305172310792 -0.393333333333333 -0.790333333333333 19.5847215290177 39.7765653770912 -0.393333333333333 -0.790333333333333 0.0110034239733302 0.000105279414814111 -3.79038850456938 -10.0313142658802 P10275 AR P10275.S310.p_AR P10275_S310s _1_1_310_310 P10275 P10275|A0A087X1B6|F5GZG9|P10275-4|P10275-3|A0A087WZ66|E9PEG3|A0A087WUX9 Androgen receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15449.15449.4 17.78 17.78 2.982 7 1 1 0 662.8318 2568.3437 S310s TMT10 302 (K) STEDTAEYsPFKGGYTK (G) S(0.0)T(0.0)EDT(0.0)AEY(0.0)S(0.99)PFKGGY(0.0)T(0.0)K K:TMT10,s:Phosphorylated S AR 100726.6 4 2 2116.1 96.92 HUMAN 1 -19.5847 -39.7766 TEDVMFISDNESFNP-p Q96RT1-8;S440-p TEDVMFISDNESFNP 0.94478758147709 0.0388929059226462 -0.011 0.258 0.485837889907665 18.9334817490571 -0.011 0.258 0.894162003469188 0.0127835603219884 -0.139417972436475 3.65052425306456 Q96RT1 ERBB2IP Q96RT1.8.S440.p_ERBB2IP Q96RT1-8_S440s _1_1_440_440 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5|Q96RT1-4|Q96RT1-6|Q96RT1-7 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30688.30688.3 24.04 24.04 1.176 4 1 1 0 994.775 2902.3403 S440s TMT10 433 (R) TEDVMFIsDNESFNPSLWEEQR (K) T(0.0)EDVMFIS(0.99)DNES(0.0)FNPS(0.0)LWEEQR s:Phosphorylated S ERBIN 159762.8 20 3 81.1 633.5 HUMAN 1 -0.4858 18.9335 TEEGPTLSYGRDGRS-p A8MXP9;S157-p TEEGPTLSYGRDGRS 0.750387635664066 0.608292926318427 0.0446666666666667 0.065 2.375116555138 2.93232457108549 0.0446666666666667 0.065 0.578746455851925 0.509058323498158 0.590360124450714 0.706534927601105 A8MXP9 NotFound A8MXP9.S157.p_NotFound A8MXP9_S157s _1_1_157_157 A8MXP9 A8MXP9|P43243|D6REM6 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8799.8799.2 9.99 9.99 1.212 4 1 1 0 923.9279 1766.8871 S157s TMT10 150 (R) TEEGPTLsYGRDGR (S) T(0.0)EEGPT(0.0)LS(0.99)Y(0.0)GRDGR s:Phosphorylated S MATR3 100478.9 3 11 92.1 615.57 HUMAN 1 2.3751 2.9323 TEEIKEDSDEMPSEC-p Q96LT9;S381-p TEEIKEDSDEMPSEC 0.93570971108637 0.0355834110074372 0.012 0.275 0.565407524325379 19.5004815443189 0.012 0.275 0.877928701963028 0.0112189405215508 0.161006552132461 3.769143893777 Q96LT9 RNPC3 Q96LT9.S381.p_RNPC3 Q96LT9_S381s _1_1_381_381 Q96LT9 Q96LT9|Q96LT9-2 RNA-binding protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27364.27364.5 25.92 24.08 7.248 4 1 1 0 792.8006 3879.9963 S381s TMT10 365 (K) IFPKPNLDITEEIKEDsDEMPSECISR (R) IFPKPNLDIT(0.0)EEIKEDS(0.99)DEMPS(0.0)ECIS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RNPC3 59030.5 7 3 1949.1 105.79 HUMAN 1 0.5654 19.5005 TEEILEKSFSEFGKL-p O43390;S360-p TEEILEKSFSEFGKL 0.168689953351787 0.00865768844369499 -0.475333333333333 -0.561333333333333 15.4242275001286 29.2640193534712 -0.475333333333333 -0.561333333333334 0.0286798747253517 0.00118467183831492 -2.95840055824965 -6.20177371621795 O43390 HNRNPR O43390.S360.p_HNRNPR O43390_S360s _1_1_360_360 O43390 O43390-2|O43390-3|O43390-4|B4DT28 Heterogeneous nuclear ribonucleoprotein R HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18803.18803.3 10.86 10.86 10.856 2 1 1 0 579.9716 1657.9314 S360s TMT10 360 (K) sFSEFGKLER (V) S(0.99)FS(0.0)EFGKLER K:TMT10,s:Phosphorylated S HNRNPR 71227 1 6 1376.2 148.68 HUMAN 1 -15.4242 -29.264 TEEPPPRSPPESESE-p Q9H5V8;S797-p TEEPPPRSPPESESE 0.154754532748189 0.265546739575654 -0.307 -0.222666666666667 16.2817189053311 7.58381676596893 -0.307 -0.222666666666667 0.0235411735730286 0.174428852362567 -3.1224718468092 -1.56240049351193 Q9H5V8 CDCP1 Q9H5V8.S797.p_CDCP1 Q9H5V8_S797s _1_1_797_797 Q9H5V8 Q9H5V8 CUB domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14765.14765.4 9.86 9.86 1.124 9 1 1 0 1005.9804 3940.9241 S797s TMT10 788 (K) LATEEPPPRsPPESESEPYTFSHPNNGDVSSK (D) LAT(0.0)EEPPPRS(0.99)PPES(0.0)ES(0.0)EPY(0.0)T(0.0)FS(0.0)HPNNGDVS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S CDCP1 94356.4 1 2 5005.1 23.98 HUMAN 1 -16.2817 -7.5838 TEEQARKTFERAMKL-p Q12959-2;T875-p TEEQARKTFERAMKL 0.192059131883792 0.0103488770224834 -0.248333333333333 0.465666666666667 13.9891684894324 27.8685962853336 -0.248333333333333 0.465666666666667 0.0399101307935292 0.00163357986375961 -2.69093001700031 5.80060825631938 Q12959 DLG1 Q12959.2.T875.p_DLG1 Q12959-2_T875t _1_1_875_875 Q12959-2 Q12959-2|Q12959-7|Q12959-4|A0A0C4DFT3|Q12959-6|Q12959-3|Q12959-5 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6487.6487.5 11.78 11.78 11.783 2 1 1 0 441.2416 2122.2133 T875t TMT10 866 (K) RLTEEQARKtFER (A) RLT(0.0)EEQARKT(0.99)FER K:TMT10,t:Phosphorylated T DLG1 103604.4 2 26 196.1 460.79 HUMAN 1 -13.9892 27.8686 TEESKADSPPPSYPT-p A0A1B0GVL4;S684-p TEESKADSPPPSYPT 0.555451445246345 0.500555749976753 -0.155666666666667 0.0916666666666667 4.71523325133485 4.02323972171071 -0.155666666666667 0.0916666666666667 0.337657713199228 0.395982531578846 -1.05160485522655 0.921412565936632 A0A1B0GVL4 NotFound A0A1B0GVL4.S684.p_NotFound A0A1B0GVL4_S684s _1_1_684_684 A0A1B0GVL4 A0A1B0GVL4|P78312|P78312-5|P78312-2|P78312-6|P78312-4|D6RFZ4|P78312-3 Protein FAM193A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10875.10875.4 26.77 19.88 2.491 7 1 1 0 1079.2499 4234.0094 S684s TMT10 677 (R) TEESKADsPPPSYPTQQAEQAPNTCECHVCK (Q) T(0.0)EES(0.0)KADS(0.99)PPPS(0.0)Y(0.0)PT(0.0)QQAEQAPNT(0.0)CECHVCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S FAM193A 168423.2 2 3 1381.1 148.28 HUMAN 1 -4.7152 4.0232 TEEVFNNSPTNQEKM-p Q8N6Q8;S265-p TEEVFNNSPTNQEKM 0.0395731079578075 0.00383353911450223 -0.540333333333333 -0.59 31.5449180404851 35.7938872532918 -0.540333333333333 -0.59 0.000700661405535609 0.000263397273213333 -6.91629147536263 -8.39111263995552 Q8N6Q8 METTL25 Q8N6Q8.S265.p_METTL25 Q8N6Q8_S265s _1_1_265_265 Q8N6Q8 Q8N6Q8 Methyltransferase-like protein 25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11925.11925.3 20.04 20.04 2.239 3 1 1 0 944.8071 2752.4357 S265s TMT10 254 (K) NKADTEEVFNNsPTNQEK (M) NKADT(0.0)EEVFNNS(0.99)PT(0.0)NQEK K:TMT10,s:Phosphorylated S METTL25 69353.2 1 1 5369.1 20.04 HUMAN 1 -31.5449 -35.7939 TEFEYTDSESEVKVR-p O15417;S1915-p TEFEYTDSESEVKVR 0.862029975440239 0.190899182079269 0.0253333333333333 0.130666666666667 1.25994884356653 9.45842560768322 0.0251634896418711 0.130666666666667 0.748178313404315 0.113281095229443 0.337870226373883 1.8870365188203 O15417 TNRC18 O15417.S1915.p_TNRC18 O15417_T1913tS1915s_2_2_1913_1915 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26779.26779.3 11.81 11.81 1.326 6 2 2 0 894.0811 2520.2758 T1913t S1915s TMT10 1903 (R) QSLLGTEFEYtDsESEVK (V) QS(0.0)LLGT(0.0)EFEY(0.0)T(0.99)DS(0.99)ES(0.0)EVK K:TMT10,t:Phosphorylated T,s:Phosphorylated S TNRC18 316168 2 35 75.1 647.68 HUMAN 1 1.2599 9.4584 TEFVHQNSQEIQRSS-p O43164;S253-p TEFVHQNSQEIQRSS 0.787271726091549 0.745769913300874 0.044 -0.0606666666666666 2.00618229157761 1.75793389386528 0.044 -0.0606666666666667 0.630059799763597 0.667124070348424 0.51017071811809 -0.45445094066739 O43164 PJA2 O43164.S253.p_PJA2 O43164_S253s _1_1_253_253 O43164 O43164|O43164-2 E3 ubiquitin-protein ligase Praja-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8880.8880.3 14.85 14.85 5.315 4 1 1 0 781.3599 2262.0948 S253s TMT10 241 (K) SSAGDTEFVHQNsQEIQR (S) S(0.0)S(0.0)AGDT(0.0)EFVHQNS(0.99)QEIQR s:Phosphorylated S PJA2 79239.7 1 3 2853.1 68.06 HUMAN 1 2.0062 -1.7579 TEGEEEESQEEDGDI-p Q9ULI0;S263-p TEGEEEESQEEDGDI 0.476784104106263 0.00925477031703611 0.147666666666667 0.455666666666667 5.92104534315655 28.7229190608748 0.147666666666667 0.455666666666667 0.2557970111551 0.00134186274021199 1.27048568352105 6.04373784081957 Q9ULI0 ATAD2B Q9ULI0.S263.p_ATAD2B Q9ULI0_S255sT256tS263s_3_3_255_263 Q9ULI0 Q9ULI0|Q9ULI0-2 ATPase family AAA domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17034.17034.5 21.78 21.78 4.332 6 3 3 0 1112.8472 5320.302 S255s T256t S263s TMT10 244 (R) NSYGIQNHHEVstEGEEEEsQEEDGDIEVEEAEGEENDRPYNLR (Q) NS(0.0)Y(0.0)GIQNHHEVS(0.99)T(0.99)EGEEEES(0.99)QEEDGDIEVEEAEGEENDRPY(0.0)NLR s:Phosphorylated S,t:Phosphorylated T ATAD2B 166451.5 3 17 531.1 280.81 HUMAN 1 5.921 28.7229 TEGNIDDSLIGGNAS-p A0A0B4J2C3;S46-p TEGNIDDSLIGGNAS 0.94478758147709 0.017689487405434 -0.011 -0.429 0.487029417332468 24.1385495494004 -0.011 -0.429 0.893916715432304 0.00385607120686102 -0.139743579936335 -4.82310347425376 A0A0B4J2C3 TPT1 A0A0B4J2C3.S46.p_TPT1 A0A0B4J2C3_S46s _1_1_46_46 A0A0B4J2C3 A0A0B4J2C3|Q5W0H4|P13693|J3KPG2|P13693-2 Translationally-controlled tumor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29974.29974.5 30.88 30.88 2.673 10 1 1 0 1079.9202 5315.5902 S46s TMT10 39 (R) TEGNIDDsLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTK (E) T(0.0)EGNIDDS(0.99)LIGGNAS(0.0)AEGPEGEGT(0.0)ES(0.0)T(0.0)VIT(0.0)GVDIVMNHHLQET(0.0)S(0.0)FT(0.0)K K:TMT10,s:Phosphorylated S TPT1 22801.7 7 1 4296.1 34.05 HUMAN 1 -0.487 -24.1385 TEGPDFPSPSVPLKA-p Q8IYJ3;S159-p TEGPDFPSPSVPLKA 0.600127882303281 0.721778811170704 -0.100666666666667 0.0406666666666667 4.09560731412566 1.95156609891064 -0.100666666666667 0.0406666666666667 0.389438845061571 0.638033365020472 -0.935361460850215 0.497991780350809 Q8IYJ3 SYTL1 Q8IYJ3.S159.p_SYTL1 Q8IYJ3_S159s _1_1_159_159 Q8IYJ3 Q8IYJ3 Synaptotagmin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21944.21944.3 12.64 10.62 1.151 3 1 1 0 803.0934 2327.3011 S159s TMT10 149 (R) LRETEGPDFPsPSVPLK (A) LRET(0.0)EGPDFPS(0.99)PS(0.0)VPLK K:TMT10,s:Phosphorylated S SYTL1 62141.3 2 3 1335.1 152.58 HUMAN 1 -4.0956 1.9516 TEHHRGPSTSRSPNK-p O14578-3;S1433-p TEHHRGPSTSRSPNK 0.969003701508516 0.0166076750945612 -0.0113333333333333 -0.349333333333333 0.267731813389366 24.574796113338 -0.0113333333333334 -0.349333333333333 0.940214227354177 0.00348754956623894 -0.07854908048642 -4.93086721965002 O14578 CIT O14578.3.S1433.p_CIT O14578-3_S1433s _1_1_1433_1433 O14578-3 O14578-3 Isoform 3 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3417.3417.3 8.68 8.68 1.123 4 1 1 0 447.2237 1259.6905 S1433s Hydrogen 1431 (R) GPsTSRSPNK (R) GPS(0.99)T(0.0)S(0.0)RS(0.0)PNK K:TMT10-Lys-Only,s:Phosphorylated S CIT 178629.2 2 1 366.2 342.11 HUMAN 1 -0.2677 -24.5748 TEHLRLHTGEKPYEC-p A0A087WVP9;T352-p TEHLRLHTGEKPYEC 0.729757185802638 0.719231315077257 0.0503333333333333 0.0433333333333334 2.59528892466204 1.97142196448504 0.0503333333333333 0.0433333333333334 0.55013732010863 0.635122946216002 0.636939997331836 0.502405861089723 A0A087WVP9 NotFound A0A087WVP9.T352.p_NotFound A0A087WVP9_T345tT352t_2_2_345_352 A0A087WVP9 Q8TAF7|A0A087WVP9|B4DRP8|Q8TAF7-2|A0A087WV02 Zinc finger protein 461 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9029.9232.4 7.21 1.05 99 2 2 2 0 596.8041 2224.2603 T345t T352t TMT10 341 (R) GFQLtEHLRLHtGEK (P) GFQLT(1.0)EHLRLHT(1.0)GEK K:TMT10,t:Phosphorylated T ZNF461 68107.6 2 2 240.45 415.72 HUMAN 1 2.5953 1.9714 TEIKPIPSNIDKSLY-p P26196;S462-p TEIKPIPSNIDKSLY 0.80284168800204 0.0201339983441952 -0.0376666666666667 -0.353 1.83713814373675 23.2322260996346 -0.0376666666666667 -0.353 0.655067699708829 0.00475091641814419 -0.472425223530279 -4.6043168110496 P26196 DDX6 P26196.S462.p_DDX6 P26196_S462s _1_1_462_462 P26196 P26196 Probable ATP-dependent RNA helicase DDX6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24681.24681.4 16.15 16.15 6.451 3 1 1 0 720.4 2798.6118 S462s TMT10 448 (K) SIEEQLGTEIKPIPsNIDK (S) S(0.0)IEEQLGT(0.0)EIKPIPS(0.99)NIDK K:TMT10,s:Phosphorylated S DDX6 54815.2 2 3 3811.1 42.63 HUMAN 1 -1.8371 -23.2322 TEIRHEVSFKNMTHK-p Q9UBW7;S439-p TEIRHEVSFKNMTHK 0.175100795380215 0.127158974692481 -0.534666666666667 -0.168 15.0774804052115 11.8066155740365 -0.534666666666667 -0.168 0.0310636124621741 0.0659687784975017 -2.89299535907904 -2.2969554336344 Q9UBW7 ZMYM2 Q9UBW7.S439.p_ZMYM2 Q9UBW7_S439s _1_1_439_439 Q9UBW7 Q9UBW7|Q9UBW7-2 Zinc finger MYM-type protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16217.16217.4 14.8 14.8 14.801 2 1 1 0 475.0135 1817.0685 S439s TMT10 431 (K) LTEIRHEVsFK (N) LT(0.0)EIRHEVS(0.99)FK K:TMT10,s:Phosphorylated S ZMYM2 158502.5 2 4 750.1 232.41 HUMAN 1 -15.0775 -11.8066 TEKEPDATPPSPRTL-p R4GMW8;T792-p TEKEPDATPPSPRTL 0.59955563859167 0.117905029262057 0.076 -0.185666666666667 4.10392970278893 12.2434122796111 0.076 -0.185666666666667 0.388693277682183 0.0596566376365262 0.936944438588068 -2.37437191898825 R4GMW8 NotFound R4GMW8.T792.p_NotFound R4GMW8_T792tS795s_2_2_792_795 R4GMW8 R4GMW8|A0A1W2PS85|P28715 BIVM-ERCC5 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10747.10955.3 10.79 8.41 5.981 3 2 2 0 838.4394 2353.3694 T792t S795s TMT10 783 (K) LKTEKEPDAtPPsPR (T) LKT(0.0)EKEPDAT(0.99)PPS(0.99)PR K:TMT10,t:Phosphorylated T,s:Phosphorylated S BIVM-ERCC5 185876.1 3 15 561.1 271.77 HUMAN 1 4.1039 -12.2434 TEKESAWSPPPIEIR-p Q8WYP5-2;S2247-p TEKESAWSPPPIEIR 0.438886589945755 0.00896370320305763 -0.147 -0.653 6.58713828880157 29.006183283565 -0.147 -0.653 0.219425032381751 0.00125713428749862 -1.38853223633299 -6.1260703246734 Q8WYP5 AHCTF1 Q8WYP5.2.S2247.p_AHCTF1 Q8WYP5-2_S2247s _1_1_2247_2247 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23269.23269.2 13.2 13.2 4.299 2 1 1 0 845.9244 1610.874 S2247s TMT10 2243 (K) ESAWsPPPIEIR (L) ES(0.0)AWS(0.99)PPPIEIR s:Phosphorylated S AHCTF1 258049.6 2 37 40.1 829.79 HUMAN 1 -6.5871 -29.0062 TEKGRCASLEEILSQ-p Q53GL0;S271-p TEKGRCASLEEILSQ 0.666610889058688 0.959273532092304 0.067 -0.00799999999999999 3.29279708973729 0.260468850624809 0.067 -0.00799999999999999 0.468511538357897 0.941787918581279 0.779280346566606 -0.0764696368415176 Q53GL0 PLEKHO1 Q53GL0.S271.p_PLEKHO1 Q53GL0_S271s _1_1_271_271 Q53GL0 Q53GL0|Q53GL0-2|Q5T4P9 Pleckstrin homology domain-containing family O member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22984.22984.3 7.61 7.61 5.903 2 1 1 0 538.9305 1534.8097 S271s TMT10 269 (R) CAsLEEILSQR (D) CAS(0.99)LEEILS(0.0)QR C:Carbamidomethylation,s:Phosphorylated S PLEKHO1 46464.4 1 1 7122.1 7.61 HUMAN 1 3.2928 -0.2605 TEKNSHHSWEPLDAP-p Q70EL1;S988-p TEKNSHHSWEPLDAP 0.681920528763249 0.506954929539413 0.101 -0.150666666666667 3.11715895642445 3.95306298871649 0.101 -0.150666666666667 0.487847523129684 0.402433106507241 0.744109782641104 -0.907994400557962 Q70EL1 USP54 Q70EL1.S988.p_USP54 Q70EL1_S988s _1_1_988_988 Q70EL1 Q70EL1|Q70EL1-7|Q70EL1-8 Inactive ubiquitin carboxyl-terminal hydrolase 54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11701.11701.4 10.3 10.3 3.453 2 1 1 0 561.2728 2162.1031 S988s TMT10 984 (K) NSHHsWEPLDAPEGK (L) NS(0.0)HHS(0.99)WEPLDAPEGK K:TMT10,s:Phosphorylated S USP54 189724.2 1 8 525.1 282.54 HUMAN 1 3.1172 -3.9531 TEKRESPSPAPKPRK-p A9Z1X7;S447-p TEKRESPSPAPKPRK 0.973975949589991 0.0302841373435523 -0.00933333333333332 0.812666666666667 0.224323236829149 20.54236363954 -0.00933333333333334 0.812666666666667 0.949658973485047 0.00882599416608668 -0.0661167205779295 3.99246048012636 A9Z1X7 NotFound A9Z1X7.S447.p_NotFound A9Z1X7_S447s _1_1_447_447 A9Z1X7 A9Z1X7|Q8IYB3 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5285.5285.3 10.48 10.48 1.244 2 1 1 0 535.2929 1523.8946 S447s TMT10 444 (R) ESPsPAPKPR (K) ES(0.0)PS(0.99)PAPKPR K:TMT10,s:Phosphorylated S SRRM1 103445.7 3 14 8.1 1346.57 HUMAN 1 -0.2243 20.5424 TELEKQISNEVDSED-p Q8NEZ4-3;S620-p TELEKQISNEVDSED 0.574398843945898 0.0566781042660022 0.123333333333333 0.415666666666667 4.43203816954382 16.6127256053274 0.123333333333333 0.415666666666667 0.360409461046113 0.0218136047381077 0.998864474319053 3.18438450137139 Q8NEZ4 KMT2C Q8NEZ4.3.S620.p_KMT2C Q8NEZ4-3_S620s _1_1_620_620 Q8NEZ4-3 Q8NEZ4-3|H0YMU7 Isoform 3 of Histone-lysine N-methyltransferase 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15639.15639.3 11.5 10.01 5.056 2 1 1 0 638.9884 1834.9798 S620s TMT10 618 (K) QIsNEVDSEDLK (M) QIS(0.99)NEVDS(0.0)EDLK K:TMT10,s:Phosphorylated S KMT2C 554869.1 2 7 88.1 626.31 HUMAN 1 4.432 16.6127 TELLGQATLPVGSPS-p O14523;T369-p TELLGQATLPVGSPS 0.403056299574652 0.224256403304952 0.112666666666667 0.119333333333333 7.28693999671934 8.55001194488197 0.112666666666667 0.119333333333333 0.18676951900396 0.139636452047471 1.51115294367132 1.72987754302699 O14523 C2CD2L O14523.T369.p_C2CD2L O14523_T369t _1_1_369_369 O14523 O14523-2|E9PK05 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20412.20790.3 15.01 15.01 2.287 8 1 1 0 994.4928 2901.4938 T369t TMT10 356 (R) SSSCGDTELLGQAtLPVGSPSRPLSR (R) S(0.0)S(0.0)S(0.0)CGDT(0.0)ELLGQAT(0.99)LPVGS(0.0)PS(0.0)RPLS(0.0)R C:Carbamidomethylation,t:Phosphorylated T C2CD2L 76636.4 1 4 411.1 322.51 HUMAN 1 7.2869 8.55 TELLSPGSGRAEEEE-p Q96NY8;S465-p TELLSPGSGRAEEEE 0.182183235857593 0.00461053140437773 -0.269333333333333 -0.744666666666667 14.5479432298827 34.198810627253 -0.269333333333333 -0.744666666666667 0.035091802545972 0.000380293530462219 -2.79408967255858 -7.80387564807686 Q96NY8 PVRL4 Q96NY8.S465.p_PVRL4 Q96NY8_S465s _1_1_465_465 Q96NY8 Q96NY8|Q96NY8-2 Nectin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19031.19031.3 15.55 15.55 1.294 4 1 1 0 1176.5669 3447.7015 S465s TMT10 453 (R) EIETQTELLSPGsGRAEEEEDQDEGIK (Q) EIET(0.0)QT(0.0)ELLS(0.0)PGS(0.99)GRAEEEEDQDEGIK K:TMT10,s:Phosphorylated S NECTIN4 55966.8 2 6 1903.1 108.23 HUMAN 1 -14.5479 -34.1988 TELNQAWSSLGKRAD-p A0A0D9SGF6;S1322-p TELNQAWSSLGKRAD 0.259461956859561 0.531537796920607 -0.217 -0.103666666666667 11.1153788874446 3.68924758909072 -0.217 -0.103666666666667 0.0773503193820572 0.427636967417253 -2.1763351646646 -0.857105434722384 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.S1322.p_SPTAN1 A0A0D9SGF6_S1322s _1_1_1322_1322 A0A0D9SGF6 A0A0D9SGF6|Q13813-2|A0A0D9SF54|Q13813-3 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23120.23120.3 13.7 13.7 1.148 3 1 1 0 678.0044 1952.0312 S1322s TMT10 1314 (K) CTELNQAWsSLGK (R) CT(0.0)ELNQAWS(0.99)S(0.0)LGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SPTAN1 288398.5 6 14 263.1 396.39 HUMAN 1 -11.1154 -3.6892 TELQREGSIETLSNS-p Q9H6U6;S886-p TELQREGSIETLSNS 0.0984930656667041 0.654754150890081 0.493666666666667 0.0616666666666667 21.3066651396264 2.51444258871309 0.493666666666667 0.0616666666666667 0.00740173421246952 0.560474348897502 4.16515650458909 0.619859362539189 Q9H6U6 BCAS3 Q9H6U6.S886.p_BCAS3 Q9H6U6_S886s _1_1_886_886 Q9H6U6 Q9H6U6-8|Q9H6U6-3|Q9H6U6-2|K7ESE9|Q9H6U6-6 Breast carcinoma-amplified sequence 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14357.14357.3 13.28 13.28 1.383 9 1 1 0 759.0285 2195.0989 S886s TMT10 884 (R) EGsIETLSNSSGSTSGSIPR (N) EGS(0.99)IET(0.0)LS(0.0)NS(0.0)S(0.0)GS(0.0)T(0.0)S(0.0)GS(0.0)IPR s:Phosphorylated S BCAS3 102547.1 3 10 847.1 212.9 HUMAN 1 21.3067 2.5144 TELRRDKSPGRPLER-p O14578-4;S2013-p TELRRDKSPGRPLER 0.627993569436905 0.00550441818666763 0.075 -0.509333333333333 3.75299196368093 32.7622433084012 0.075 -0.509333333333333 0.421406086173387 0.000529389921735773 0.869609178610381 -7.30559393170907 O14578 CIT O14578.4.S2013.p_CIT O14578-4_S2013s _1_1_2013_2013 O14578-4 O14578-4|O14578-3 Isoform 4 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5042.5042.4 8.43 8.43 99 1 1 1 0 423.9856 1612.9535 S2013s TMT10 2011 (R) DKsPGRPLER (E) DKS(1.0)PGRPLER K:TMT10,s:Phosphorylated S CIT 238656.7 7 17 366.1 342.11 HUMAN 1 3.753 -32.7622 TELSRSISVDLAESK-p Q9H410;S125-p TELSRSISVDLAESK 0.120260347431319 0.0127729376793859 0.502333333333333 -0.490333333333333 19.1218539581839 26.3886063789575 0.502333333333333 -0.490333333333333 0.0122409353485508 0.00229688558461137 3.69297369061324 -5.39705662547067 Q9H410 DSN1 Q9H410.S125.p_DSN1 Q9H410_S125s _1_1_125_125 Q9H410 Q9H410|Q9H410-4|Q9H410-2 Kinetochore-associated protein DSN1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19651.19651.2 14.08 8.01 3.137 3 1 1 0 793.9257 1506.8779 S125s TMT10 123 (R) SIsVDLAESK (R) S(0.0)IS(0.99)VDLAES(0.0)K K:TMT10,s:Phosphorylated S DSN1 40408.8 2 7 1406.1 145.92 HUMAN 1 19.1219 -26.3886 TELVEPLTPSGAMPN-p P04626;T701-p TELVEPLTPSGAMPN 0.407878856431238 0.0516223889238429 -0.150666666666667 -0.252333333333333 7.18552585909517 17.1748405957352 -0.150666666666667 -0.252333333333333 0.191182182045181 0.0191653140617422 -1.49345105602958 -3.29460806002102 P04626 ERBB2 P04626.T701.p_ERBB2 P04626_T701t _1_1_701_701 P04626 P04626|P04626-4|P04626-5|J3QLU9|B4DTR1|P04626-6|P04626-2|P04626-3 Receptor tyrosine-protein kinase erbB-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28403.28403.4 25.27 25.67 3.541 3 1 1 0 741.3708 2882.4953 T701t TMT10 690 (R) LLQETELVEPLtPSGAMPNQAQMR (I) LLQET(0.0)ELVEPLT(0.99)PS(0.0)GAMPNQAQMR t:Phosphorylated T ERBB2 141274.2 5 12 521.1 283.33 HUMAN 1 -7.1855 -17.1748 TELVEPLTPSGTAPN-p Q15303;T699-p TELVEPLTPSGTAPN 0.767491684982091 0.765991610065628 0.0473333333333333 -0.0303333333333333 2.20076769346273 1.59931885926485 0.0473333333333333 -0.0303333333333333 0.602453082263679 0.691939485125661 0.552818312983493 -0.418073903796273 Q15303 ERBB4 Q15303.T699.p_ERBB4 Q15303_T699t _1_1_699_699 Q15303 Q15303|Q15303-2|Q15303-3|Q15303-4|A0A0A0MSE1 Receptor tyrosine-protein kinase erbB-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29195.29195.4 19.16 19.16 1.874 4 1 1 0 705.8647 2740.4719 T699t TMT10 689 (R) FLETELVEPLtPSGTAPNQAQLR (I) FLET(0.0)ELVEPLT(0.99)PS(0.0)GT(0.0)APNQAQLR t:Phosphorylated T ERBB4 150114.6 2 29 521.3 283.33 HUMAN 1 2.2008 -1.5993 TEMASLDSDEETVFE-p Q9BVV8;S120-p TEMASLDSDEETVFE 0.561099472967173 0.983447809367037 0.0793333333333333 0.00233333333333335 4.62193172114926 0.105870533709543 0.0793333333333333 0.00233333333333336 0.344990255183212 0.975917142384494 1.03429592692567 0.0316059328773591 Q9BVV8 C19orf24 Q9BVV8.S120.p_C19orf24 Q9BVV8_S117sS120s_2_2_117_120 Q9BVV8 Q9BVV8 Uncharacterized membrane protein C19orf24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.32195.32827.3 20.84 20.84 2.366 7 2 2 0 1136.8168 3248.499 S117s S120s TMT10 103 (R) YGLLANTEDPTEMAsLDsDEETVFESR (N) Y(0.0)GLLANT(0.0)EDPT(0.0)EMAS(0.99)LDS(0.99)DEET(0.0)VFES(0.0)R s:Phosphorylated S C19orf24 14363.3 16 2 3516.1 49.28 HUMAN 1 4.6219 0.1059 TEMGPPPSPASTCSD-p O95071;S612-p TEMGPPPSPASTCSD 0.732783197794934 0.929948791228666 -0.0593333333333334 -0.0103333333333333 2.55483164748138 0.445294942116909 -0.0593333333333334 -0.0103333333333333 0.555286142147527 0.902548410680583 -0.628446634041129 -0.128283750738389 O95071 UBR5 O95071.S612.p_UBR5 O95071_S612s _1_1_612_612 O95071 O95071|O95071-2|E7EMW7 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18506.18506.4 24.69 22.3 2.956 11 1 1 0 1080.5288 4239.1339 S612s TMT10 600 (K) QEPVKTEMGPPPsPASTCSDASSIASSASMPYKR (R) QEPVKT(0.0)EMGPPPS(0.99)PAS(0.0)T(0.0)CS(0.0)DAS(0.0)S(0.0)IAS(0.0)S(0.0)AS(0.0)MPY(0.0)KR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S UBR5 312542 15 8 80.1 636.57 HUMAN 1 -2.5548 -0.4453 TENEENLSSEKAGLS-p J3KNL6;S388-p TENEENLSSEKAGLS 0.245929798209507 0.350993886673538 0.196333333333333 -0.0983333333333333 11.6572774347132 6.02694082351836 0.196333333333333 -0.0983333333333333 0.0682766582161345 0.249635254203286 2.27168850360881 -1.28905352128428 J3KNL6 SEC16A J3KNL6.S388.p_SEC16A J3KNL6_S388s_1_1_388_388 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26735.26735.4 19.54 19.54 1.184 7 1 1 0 1258.0775 4947.3202 N383n N386n S388s TMT10 347 (R) THHPLGAGAGSGCAPLEADSGASGALAMFFQGGETEnEEnLsSEK (A) T(0.0)HHPLGAGAGS(0.0)GCAPLEADS(0.0)GAS(0.0)GALAMFFQGGET(0.0)EN(1.0)EEN(1.0)LS(0.99)S(0.0)EK C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S SEC16A 253486.5 2 10 15.1 1143.82 HUMAN 1 11.6573 -6.0269 TENLASLTPKGLSPA-p Q96DF8;T386-p TENLASLTPKGLSPA 0.43096882960362 0.289795864023044 -0.142 0.120666666666667 6.73285893967269 7.09745529009348 -0.142 0.120666666666667 0.212184720034539 0.195098742864904 -1.41416568804388 1.47764774169666 Q96DF8 DGCR14 Q96DF8.T386.p_DGCR14 Q96DF8_T386t _1_1_386_386 Q96DF8 Q96DF8 Protein DGCR14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14118.14118.3 16.73 11.66 2.478 3 1 1 0 623.02 1787.0791 T386t TMT10 377 (R) RVTENLASLtPK (G) RVT(0.0)ENLAS(0.0)LT(0.99)PK K:TMT10,t:Phosphorylated T DGCR14 52624.2 6 5 924.1 199.86 HUMAN 1 -6.7329 7.0975 TENRNLVSPAYCTQE-p Q9NUQ3;S97-p TENRNLVSPAYCTQE 0.906950104261102 0.0167721109647016 -0.0173333333333333 -0.340666666666667 0.832584585653656 24.508831080542 -0.0173333333333333 -0.340666666666667 0.825546501777281 0.00354092633584133 -0.231340229975105 -4.91446740616429 Q9NUQ3 TXLNG Q9NUQ3.S97.p_TXLNG Q9NUQ3_S97s _1_1_97_97 Q9NUQ3 Q9NUQ3 Gamma-taxilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14955.14955.3 17.5 11.81 2.711 4 1 1 0 924.7673 2692.3198 S97s TMT10 94 (R) NLVsPAYCTQESREEIPGGEAR (T) NLVS(0.99)PAY(0.0)CT(0.0)QES(0.0)REEIPGGEAR C:Carbamidomethylation,s:Phosphorylated S TXLNG 61098.1 4 2 3174.1 58.72 HUMAN 1 -0.8326 -24.5088 TENRRLESKIREHLE-p P05783;S110-p TENRRLESKIREHLE 0.164891315062604 0.000952253650599092 1.24733333333333 -2.243 15.6754512611663 55.7744771906175 1.24733333333333 -2.243 0.0270679193542765 2.6457711769518e-06 3.0061186502745 -20.1269573079562 P05783 KRT18 P05783.S110.p_KRT18 P05783_S110s _1_1_110_110 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14454.14454.5 10.96 1.42 99 1 1 1 0 461.8729 2225.3697 S110s TMT10 107 (R) RLEsKIREHLEK (K) RLES(1.0)KIREHLEK K:TMT10,s:Phosphorylated S KRT18 48057 2 20 89.1 623.62 HUMAN 1 15.6755 -55.7745 TEPEAKKSKTAAKKN-p P27695;S26-p TEPEAKKSKTAAKKN 0.385448873937613 0.433727087051907 -0.125 0.129666666666667 7.66373891353067 4.8340004190184 -0.125 0.129666666666667 0.171248236810582 0.328548855071739 -1.57676804247057 1.07333729479702 P27695 APEX1 P27695.S26.p_APEX1 P27695_S26s _1_1_26_26 P27695 P27695 DNA-(apurinic or apyrimidinic site) lyase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10029.10029.5 11.41 11.41 1.1 2 1 1 0 626.1431 3046.719 S26s TMT10 8 (K) GAVAEDGDELRTEPEAKKsK (T) GAVAEDGDELRT(0.0)EPEAKKS(0.99)K K:TMT10,s:Phosphorylated S APEX1 35953.2 1 1 4543.1 30.08 HUMAN 1 -7.6637 4.834 TEPFEENSFLEQFMI-p Q9H9Q4-2;S188-p TEPFEENSFLEQFMI 0.911605742223265 0.0688185931697143 -0.022 0.237333333333333 0.785204786561685 15.4590575148487 -0.022 0.237333333333333 0.834602192644165 0.0284507846580358 -0.21909609251384 2.96299291743355 Q9H9Q4 NHEJ1 Q9H9Q4.2.S188.p_NHEJ1 Q9H9Q4-2_S188s _1_1_188_188 Q9H9Q4-2 Q9H9Q4-2 Isoform 2 of Non-homologous end-joining factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.34594.34594.4 14.1 14.54 6.05 2 1 1 0 782.4073 3046.6414 S188s TMT10 179 (R) LKTEPFEENsFLEQFMIEK (L) LKT(0.0)EPFEENS(0.99)FLEQFMIEK K:TMT10,s:Phosphorylated S NHEJ1 35804.3 1 1 6087.1 14.1 HUMAN 1 -0.7852 15.4591 TEPRGPGSPPRTPPA-p Q6ZTN6-3;S552-p TEPRGPGSPPRTPPA 0.0968265611542875 0.012032742021195 0.407 0.389666666666667 21.5175735870518 26.8117337598039 0.407 0.389666666666667 0.00705086892559933 0.00208365889342846 4.21247393180733 5.51022279134765 Q6ZTN6 ANKRD13D Q6ZTN6.3.S552.p_ANKRD13D Q6ZTN6-3_S552s _1_1_552_552 Q6ZTN6-3 Q6ZTN6-3|Q6ZTN6-2 Isoform 3 of Ankyrin repeat domain-containing protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17101.17101.4 16.67 16.67 1.374 3 1 1 0 645.826 2500.3146 S552s TMT10 549 (R) GPGsPPRTPPAPGPPSFEEQLR (L) GPGS(0.99)PPRT(0.0)PPAPGPPS(0.0)FEEQLR s:Phosphorylated S ANKRD13D 68455.9 3 1 4000.1 39.36 HUMAN 1 21.5176 26.8117 TEPSVILSKSDSDKS-p Q86UE4;S525-p TEPSVILSKSDSDKS 0.948131958402904 0.500064170780712 -0.012 0.0803333333333334 0.45910097533665 4.02796383908233 -0.012 0.0803333333333334 0.899683804070399 0.395552028550043 -0.132092598120069 0.922314133285832 Q86UE4 MTDH Q86UE4.S525.p_MTDH Q86UE4_S525s _1_1_525_525 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22992.22992.3 13.07 13.07 3.446 6 1 1 0 727.0721 2099.2364 S525s TMT10 511 (K) TLPPATSTEPSVILsK (S) T(0.0)LPPAT(0.0)S(0.0)T(0.0)EPS(0.0)VILS(0.99)K K:TMT10,s:Phosphorylated S MTDH 63892.9 10 25 77.1 644.48 HUMAN 1 -0.4591 4.028 TEPVKNSSPAPPQPA-p Q9NYV4-2;S1083-p TEPVKNSSPAPPQPA 0.58471981560589 0.0218392489834702 -0.111333333333333 0.386333333333333 4.28519250182639 22.7008982449817 -0.111333333333333 0.386333333333333 0.372804159963893 0.00536920734348048 -0.971266766236875 4.47914148463837 Q9NYV4 CDK12 Q9NYV4.2.S1083.p_CDK12 Q9NYV4-2_S1083s _1_1_1083_1083 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8292.8292.2 13.29 13.29 1.157 2 1 1 0 893.4685 1705.9637 S1083s TMT10 1081 (K) NSsPAPPQPAPGK (V) NS(0.0)S(0.99)PAPPQPAPGK K:TMT10,s:Phosphorylated S CDK12 163853.1 11 30 59.1 708.76 HUMAN 1 -4.2852 22.7009 TEQFLNRSIQKLGEL-p O94967-4;S487-p TEQFLNRSIQKLGEL 0.935158220570074 0.0245293871244246 0.0123333333333333 -0.297666666666667 0.570929018521422 21.9184634377733 0.0123333333333333 -0.297666666666667 0.876813238085844 0.00642915144656981 0.162493120987838 -4.29878472272075 O94967 WDR47 O94967.4.S487.p_WDR47 O94967-4_S487s_1_1_487_487 O94967-4 O94967-4|O94967-3|A0A0A0MRE6|O94967-2 Isoform 4 of WD repeat-containing protein 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28615.28615.5 20.5 19.89 1.17 3 1 1 0 926.6636 4548.3193 N468n S487s TMT10 456 (R) QIYQQMLLEGGVnQEDGPDQQQNLTEQFLNRsIQK (L) Q(0.0)IY(0.0)QQM(0.0)LLEGGVN(0.99)QEDGPDQQQN(0.0)LT(0.0)EQFLN(0.0)RS(0.99)IQK K:TMT10,n:Deamidated,s:Phosphorylated S WDR47 104479 2 6 1798.1 114.19 HUMAN 1 0.5709 -21.9185 TEQGAELSNEERNLL-p P63104;S37-p TEQGAELSNEERNLL 0.1437138741665 0.894370647501386 0.369333333333333 0.0223333333333334 17.1977290556465 0.680193522129611 0.369333333333333 0.0223333333333334 0.0190645735204228 0.855028611860745 3.30168124896094 0.191597134107685 P63104 YWHAZ P63104.S37.p_YWHAZ P63104_S37s _1_1_37_37 P63104 P63104 14-3-3 protein zeta/delta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25976.25976.4 13.48 13.48 2.72 5 1 1 0 744.6367 2895.5464 S37s TMT10 28 (K) SVTEQGAELsNEERNLLSVAYK (N) S(0.0)VT(0.0)EQGAELS(0.99)NEERNLLS(0.0)VAY(0.0)K K:TMT10,s:Phosphorylated S YWHAZ 27915.8 1 13 2349.1 87.09 HUMAN 1 17.1977 0.6802 TEQIRSLSEAMSVEK-p Q6P1J9;S174-p TEQIRSLSEAMSVEK 0.15799196982751 0.247519310224086 -0.237666666666667 -0.115 16.0754496011951 7.98957752744754 -0.237666666666667 -0.115 0.0246862452855484 0.158870128660622 -3.08269082595953 -1.63283569564939 Q6P1J9 CDC73 Q6P1J9.S174.p_CDC73 Q6P1J9_S174s _1_1_174_174 Q6P1J9 Q6P1J9|A0A1B0GUB2 Parafibromin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19685.19685.3 8.77 8.77 2.138 3 1 1 0 540.2777 1538.85 S174s TMT10 172 (R) SLsEAMSVEK (I) S(0.0)LS(0.99)EAMS(0.0)VEK K:TMT10,s:Phosphorylated S CDC73 60689.6 1 1 4030.1 38.87 HUMAN 1 -16.0754 -7.9896 TEQKTCDSD______-p J3KR35;S178-p TEQKTCDSD______ 0.14685232684758 0.0985416934487715 0.912666666666667 -0.606 16.9173885079995 13.303632354515 0.912666666666667 -0.606 0.0203357947181494 0.0467344100271422 3.24638141364903 -2.56448001560093 J3KR35 CCDC12 J3KR35.S178.p_CCDC12 J3KR35_S178s _1_1_178_178 J3KR35 J3KR35|Q8WUD4 Coiled-coil domain containing 12, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21152.21152.2 22.9 22.9 2.467 5 1 1 0 1418.6307 2756.2933 S178s TMT10 158 (K) GQEDSLASAVDAATEQKTCDsD (-) GQEDS(0.0)LAS(0.0)AVDAAT(0.0)EQKT(0.0)CDS(0.99)D K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CCDC12 20557.9 8 2 3177.1 58.58 HUMAN 1 16.9174 -13.3036 TEQVVDFSDRETKNT-p O95251;S111-p TEQVVDFSDRETKNT 0.525553689105919 0.961653000540495 -0.124 0.00533333333333334 5.16785371275212 0.243677384160483 -0.124 0.00533333333333334 0.304238820520527 0.945436275123119 -1.13473108529613 0.0716669637931587 O95251 KAT7 O95251.S111.p_KAT7 O95251_S111s _1_1_111_111 O95251 O95251 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13060.13060.3 16.9 12.08 3.51 6 1 1 0 847.0727 2459.2302 S111s TMT10 99 (R) SSGSETEQVVDFsDRETK (N) S(0.0)S(0.0)GS(0.0)ET(0.0)EQVVDFS(0.99)DRET(0.0)K K:TMT10,s:Phosphorylated S KAT7 71325.8 1 8 691.1 243.06 HUMAN 1 -5.1679 0.2437 TERESQDTVAENDDG-p P49768;T327-p TERESQDTVAENDDG 0.294929222562145 0.0787838886592226 0.166666666666667 0.199666666666667 10.0034292184599 14.6498660243649 0.166666666666667 0.199666666666667 0.0999210704926718 0.0342778360763289 1.9823062329372 2.81125539018497 P49768 PSEN1 P49768.T327.p_PSEN1 P49768_S324sT327t_2_2_324_327 P49768 P49768|P49768-2|P49768-7|E7ES96 Presenilin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17629.17629.3 10.58 10.58 2.481 6 2 2 0 1280.1818 3678.5902 S324s T327t TMT10 315 (K) YNAESTEREsQDtVAENDDGGFSEEWEAQR (D) Y(0.0)NAES(0.0)T(0.0)ERES(0.99)QDT(0.99)VAENDDGGFS(0.0)EEWEAQR s:Phosphorylated S,t:Phosphorylated T PSEN1 52952.1 2 5 2595.1 77.27 HUMAN 1 10.0034 14.6499 TERLRSFSMHDLTTI-p Q6NUK4;S152-p TERLRSFSMHDLTTI 0.719529968451986 0.0385337940652139 -0.0496666666666667 -0.313333333333333 2.69821767717283 18.9974773597285 -0.0496666666666667 -0.313333333333333 0.537252236763583 0.0125965688285928 -0.658420841377196 -3.66381356551304 Q6NUK4 REEP3 Q6NUK4.S152.p_REEP3 Q6NUK4_S152s _1_1_152_152 Q6NUK4 Q6NUK4 Receptor expression-enhancing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23378.23378.3 23.58 20.45 2.325 5 1 1 0 1227.2782 3599.8568 S152s TMT10 150 (R) SFsMHDLTTIQGDEPVGQRPYQPLPEAK (K) S(0.0)FS(0.99)MHDLT(0.0)T(0.0)IQGDEPVGQRPY(0.0)QPLPEAK K:TMT10,s:Phosphorylated S REEP3 29263.4 39 1 1967.1 104.95 HUMAN 1 -2.6982 -18.9975 TERNLDLSWSELKKE-p Q12769;S490-p TERNLDLSWSELKKE 0.300973278728137 0.0395258109750821 -0.208666666666667 0.261 9.79263137505908 18.8214907070988 -0.208666666666667 0.261 0.104890670717992 0.0131174956632796 -1.94570493495855 3.62732778118773 Q12769 NUP160 Q12769.S490.p_NUP160 Q12769_S490s _1_1_490_490 Q12769 Q12769|Q12769-3 Nuclear pore complex protein Nup160 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25135.25135.3 14 14 2.314 2 1 1 0 700.7292 2020.2046 S490s TMT10 486 (R) NLDLsWSELKK (E) NLDLS(0.99)WS(0.0)ELKK K:TMT10,s:Phosphorylated S NUP160 164457.6 2 1 2575.1 78.09 HUMAN 1 -9.7926 18.8215 TERQRKFSIFEEKVF-p P57060;S275-p TERQRKFSIFEEKVF 0.888441416472976 0.00588968658673039 -0.0223333333333333 0.614666666666667 1.00086407222444 32.2254231095197 -0.0223333333333334 0.614666666666667 0.794170210913468 0.00059904257430476 -0.274095156806927 7.12643390653422 P57060 RWDD2B P57060.S275.p_RWDD2B P57060_S275s _1_1_275_275 P57060 P57060 RWD domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21872.21872.2 8.42 8.42 99 1 1 1 0 898.0126 1715.0347 S275s TMT10 273 (R) KFsIFEEK (V) KFS(1.0)IFEEK K:TMT10,s:Phosphorylated S RWDD2B 36845.3 2 2 4644.1 28.42 HUMAN 1 -1.0009 32.2254 TERRSSDSWEVWGSA-p Q8N6T3;S363-p TERRSSDSWEVWGSA 0.838966373162015 0.0801854379548651 0.051 -0.204333333333333 1.47628135442918 14.5429431558067 0.051 -0.204333333333333 0.71182275086441 0.0351322273414965 0.389421887771183 -2.79140737622092 Q8N6T3 ARFGAP1 Q8N6T3.S363.p_ARFGAP1 Q8N6T3_S363s _1_1_363_363 Q8N6T3 Q8N6T3-2|Q8N6T3-5|F8VWH9|Q8N6T3-4 ADP-ribosylation factor GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18990.18990.2 13.94 7.83 1.587 6 1 1 0 989.4336 1897.8878 S363s TMT10 360 (R) SSDsWEVWGSASTNR (N) S(0.0)S(0.0)DS(0.99)WEVWGS(0.0)AS(0.0)T(0.0)NR s:Phosphorylated S ARFGAP1 45009.4 2 17 243.1 413.25 HUMAN 1 1.4763 -14.5429 TERTRLLSEVMEELE-p Q9NWB7;S347-p TERTRLLSEVMEELE 0.00874686268802314 0.000993050805672115 -1.40366666666667 -1.22566666666667 50.2057144483746 52.7375178602861 -1.40366666666667 -1.22566666666667 9.53736832770411e-06 5.32412464040484e-06 -15.8818710899928 -17.6614825108857 Q9NWB7 IFT57 Q9NWB7.S347.p_IFT57 Q9NWB7_S347s _1_1_347_347 Q9NWB7 Q9NWB7 Intraflagellar transport protein 57 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36535.36535.2 10.58 10.58 99 1 1 1 0 814.9057 1548.8392 S347s Hydrogen 345 (R) LLsEVMEELEK (V) LLS(1.0)EVMEELEK K:TMT10-Lys-Only,s:Phosphorylated S IFT57 49278.6 1 1 6613.1 10.58 HUMAN 1 -50.2057 -52.7375 TESEEVVSREVSGIK-p P02545;S71-p TESEEVVSREVSGIK 0.116302905463927 0.00840448513471 -0.354333333333333 0.433333333333333 19.4488141433089 29.4825496209249 -0.354333333333333 0.433333333333334 0.0113532077677075 0.0011265359044163 -3.76164572311542 6.266512095743 P02545 LMNA P02545.S71.p_LMNA P02545_S71s _1_1_71_71 P02545 P02545|P02545-3|P02545-6|P02545-2|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20488.20488.4 7.57 7.57 1.372 4 1 1 0 575.8102 2220.2487 S71s TMT10 63 (R) ITESEEVVsREVSGIK (A) IT(0.0)ES(0.0)EEVVS(0.99)REVS(0.0)GIK K:TMT10,s:Phosphorylated S LMNA 74423.5 3 8 60.1 706.83 HUMAN 1 -19.4488 29.4825 TESLDPPSVPVNPAL-p Q71F56;S575-p TESLDPPSVPVNPAL 0.127580448450417 0.0114403287502869 0.271666666666667 0.455333333333333 18.5446272351765 27.172077309736 0.271666666666667 0.455333333333333 0.0139809691200817 0.00191775122585858 3.57333827284582 5.60797493734745 Q71F56 MED13L Q71F56.S575.p_MED13L Q71F56_S575s _1_1_575_575 Q71F56 Q71F56 Mediator of RNA polymerase II transcription subunit 13-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.31884.31884.5 24.8 24.8 5.648 7 1 1 0 943.8816 4635.4103 S575s TMT10 565 (R) GQETESLDPPsVPVNPALYGNGLELQQLSTLDDRTVLVGQR (L) GQET(0.0)ES(0.0)LDPPS(0.99)VPVNPALY(0.0)GNGLELQQLS(0.0)T(0.0)LDDRT(0.0)VLVGQR s:Phosphorylated S MED13L 245507 9 5 415.1 321.44 HUMAN 1 18.5446 27.1721 TESPIKLSPATPSRK-p Q9Y6X9;S730-p TESPIKLSPATPSRK 0.306684187031916 0.264827485993513 0.164333333333333 0.12 9.6061124360839 7.59996028353117 0.164333333333333 0.12 0.109493605390056 0.173781672110604 1.91335234900663 1.56520684794887 Q9Y6X9 MORC2 Q9Y6X9.S730.p_MORC2 Q9Y6X9_S730s _1_1_730_730 Q9Y6X9 Q9Y6X9|Q9Y6X9-2 MORC family CW-type zinc finger protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14067.14067.3 9.78 7.11 9.776 5 1 1 0 674.7061 1942.1373 S730s TMT10 723 (K) TESPIKLsPATPSR (K) T(0.0)ES(0.0)PIKLS(0.99)PAT(0.0)PS(0.0)R K:TMT10,s:Phosphorylated S MORC2 118619.8 4 7 309.1 372.4 HUMAN 1 9.6061 7.6 TESSDLFTNLNLGRT-p Q9Y3S2;T300-p TESSDLFTNLNLGRT 0.843942307663143 0.00457579421824357 -0.072 0.615 1.42581092560858 34.2517829962296 -0.072 0.615 0.720143271715813 0.000375683135891463 -0.377523304420076 7.82279055999473 Q9Y3S2 ZNF330 Q9Y3S2.T300.p_ZNF330 Q9Y3S2_T300t_1_1_300_300 Q9Y3S2 Q9Y3S2 Zinc finger protein 330 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21504.21504.5 12.46 11.66 0 10 1 1 0 1164.0883 5735.4225 T300t N303n TMT10 262 (K) YGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSDLFtNLnLGR (T) Y(0.0)GDT(0.0)S(0.0)Y(0.0)HDEEEDEY(0.0)EAEDDEEEEDEGRKDS(0.0)DT(0.0)ES(0.0)S(0.0)DLFT(0.99)N(0.50)LN(0.50)LGR K:TMT10,t:Phosphorylated T,n:Deamidated ZNF330 37855.2 1 3 4301.1 34.03 HUMAN 1 -1.4258 34.2518 TESSGTQSPKRHSGS-p P25054;S2830-p TESSGTQSPKRHSGS 0.0722495595033206 0.104286956667605 0.476 0.274666666666667 24.5336576613683 12.9703803101549 0.476 0.274666666666667 0.00352074226533451 0.0504617106485597 4.92662798904248 2.50436067789437 P25054 APC P25054.S2830.p_APC P25054_S2830s _1_1_2830_2830 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5218.5218.2 16.13 11.7 2.123 7 1 1 0 931.9442 1782.9122 S2830s TMT10 2820 (K) TDSTESSGTQsPK (R) T(0.0)DS(0.0)T(0.0)ES(0.0)S(0.0)GT(0.0)QS(0.99)PK K:TMT10,s:Phosphorylated S APC 313808.5 4 56 33.1 890.71 HUMAN 1 24.5337 12.9704 TETDSVGTPQSNGGM-p Q9H0H5;T277-p TETDSVGTPQSNGGM 0.95578545369103 0.353124910662283 0.0103333333333333 0.193666666666667 0.384984814836005 5.99328950193227 0.0103333333333333 0.193666666666667 0.915169459177798 0.251577067111725 0.111591972776954 1.28306315399479 Q9H0H5 RACGAP1 Q9H0H5.T277.p_RACGAP1 Q9H0H5_S274sT277t_2_2_274_277 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7772.7772.3 8.32 8.32 1.168 5 2 2 0 675.9464 1865.8861 S274s T277t TMT10 270 (R) TETDsVGtPQSNGGMR (L) T(0.0)ET(0.0)DS(0.99)VGT(0.99)PQS(0.0)NGGMR s:Phosphorylated S,t:Phosphorylated T RACGAP1 71709.9 1 22 574.1 268.64 HUMAN 1 0.385 5.9933 TETNPVTSNSDEECN-p P46100;S675-p TETNPVTSNSDEECN 0.969272902686383 0.0363181350343363 -0.00716666666666667 -0.263166666666667 0.264606630597512 19.3803070481318 -0.00716666666666667 -0.263166666666667 0.940891048938427 0.0115337171104507 -0.0776577119000089 -3.74383608688018 P46100 ATRX P46100.S675.p_ATRX P46100_S675sS677s_2_2_675_677 P46100 P46100|P46100-4 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8669.8669.3 21.9 21.9 1.445 6 2 2 0 932.7271 2636.2307 S675s S677s Hydrogen 666 (R) RPTETNPVTsNsDEECNETVK (E) RPT(0.0)ET(0.0)NPVT(0.0)S(0.99)NS(0.99)DEECNET(0.0)VK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S ATRX 285034.2 10 45 18.1 1035.36 HUMAN 2 -0.2646 -19.3803 TETQRKPSEDEVLNK-p Q8NDI1;S1058-p TETQRKPSEDEVLNK 0.00886207961121239 0.00159168462790637 -1.263 -1.285 49.5613301346953 44.8858356970572 -1.263 -1.285 1.10628490486173e-05 3.24650764792361e-05 -15.4442415852048 -12.5634119652366 Q8NDI1 EHBP1 Q8NDI1.S1058.p_EHBP1 Q8NDI1_S1058s _1_1_1058_1058 Q8NDI1 Q8NDI1|Q8NDI1-2|Q8NDI1-3 EH domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13212.13212.4 10.81 7.25 2.106 3 1 1 0 699.8856 2716.5448 S1058s TMT10 1048 (K) AAITETQRKPsEDEVLNK (G) AAIT(0.0)ET(0.0)QRKPS(0.99)EDEVLNK K:TMT10,s:Phosphorylated S EHBP1 140642.4 5 15 285.1 385.52 HUMAN 1 -49.5613 -44.8858 TEVDFNKSDASLLGS-p P54132;S419-p TEVDFNKSDASLLGS 0.176240941475 0.00179199224373901 -0.476 -0.857 14.9761597118262 43.2943992810051 -0.476 -0.857 0.0317968449262188 4.68338727815597e-05 -2.87398110087389 -11.7172071822898 P54132 BLM P54132.S419.p_BLM P54132_S419s _1_1_419_419 P54132 P54132|H0YNU5 Bloom syndrome protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36309.36309.4 22.84 22.84 1.225 4 1 1 0 701.3758 2722.518 S419s TMT10 410 (K) LLTEVDFNKsDASLLGSLWR (Y) LLT(0.0)EVDFNKS(0.99)DAS(0.0)LLGS(0.0)LWR K:TMT10,s:Phosphorylated S BLM 160709.2 3 12 1140.2 173.27 HUMAN 1 -14.9762 -43.2944 TEVENGGSLGSKKGV-p P14618;S202-p TEVENGGSLGSKKGV 0.237912707669171 0.427579830954999 0.274 0.0756666666666667 11.9440708022321 4.91200926256079 0.274 0.0756666666666667 0.0639135469392657 0.322700080501432 2.32241822869095 1.08769183610549 P14618 PKM P14618.S202.p_PKM P14618_S202s _1_1_202_202 P14618 P14618|P14618-2|P14618-3|B4DNK4|H3BQ34 Pyruvate kinase PKM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26202.26202.3 20.62 20.62 4.394 3 1 1 0 773.3941 2238.2018 S202s TMT10 189 (K) GADFLVTEVENGGsLGSK (K) GADFLVT(0.0)EVENGGS(0.99)LGS(0.0)K K:TMT10,s:Phosphorylated S PKM 58506.4 2 10 502.1 291.2 HUMAN 1 11.9441 4.912 TEVFLDDSHSPANCR-p Q96BY7;S733-p TEVFLDDSHSPANCR 0.0977878318182972 0.0274461857391878 0.333 0.336333333333333 21.3731035209252 21.1806275870642 0.333 0.336333333333333 0.00728936417301821 0.0076196889203097 4.18002736713295 4.13287045780018 Q96BY7 ATG2B Q96BY7.S733.p_ATG2B Q96BY7_S733s _1_1_733_733 Q96BY7 Q96BY7 Autophagy-related protein 2 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21428.21752.3 21.37 21.37 1.25 3 1 1 0 759.0056 2195.0389 S733s TMT10 724 (K) AFTEVFLDDsHSPANCR (I) AFT(0.0)EVFLDDS(0.99)HS(0.0)PANCR C:Carbamidomethylation,s:Phosphorylated S ATG2B 234641.2 2 6 1188.1 168.47 HUMAN 1 21.3731 21.1806 TEVIRKGSITEYTAA-p J3KN59;S235-p TEVIRKGSITEYTAA 0.204518295038898 0.760135095590802 -0.206333333333333 0.0716666666666667 13.3410954605362 1.64507387695924 -0.206333333333333 0.0716666666666668 0.0463330035039755 0.684687835905253 -2.57271602137338 0.428636363279318 J3KN59 BNIP2 J3KN59.S235.p_BNIP2 J3KN59_S235s _1_1_235_235 J3KN59 J3KN59|Q12982-2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8284.8284.4 21.13 21.13 2.375 4 1 1 0 645.3292 2498.3251 S235s Hydrogen 233 (R) KGsITEYTAAEEKEDGRR (W) KGS(0.99)IT(0.0)EY(0.0)T(0.0)AAEEKEDGRR K:TMT10-Lys-Only,s:Phosphorylated S BNIP2 49128.7 19 1 2723.1 72.88 HUMAN 1 -13.3411 1.6451 TEWSVNGSPIDTLRE-p M0QXA7;S580-p TEWSVNGSPIDTLRE 0.233200848442376 0.00728921980858681 -0.204 -0.633333333333333 12.1441164943932 30.5655612392762 -0.204 -0.633333333333333 0.0610363213062737 0.000877897628950444 -2.35792318762673 -6.59534508316185 M0QXA7 WIZ M0QXA7.S580.p_WIZ M0QXA7_S580s _1_1_580_580 M0QXA7 O95785|M0QXA7|O95785-3|O95785-4|B9EGQ5|O95785-2 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.33588.33588.4 21.39 21.39 1.167 4 1 1 0 842.9614 3288.8593 S580s TMT10 569 (R) QMGVTEWSVNGsPIDTLREILKK (K) Q(0.0)M(0.0)GVT(0.0)EWS(0.0)VN(0.0)GS(0.99)PIDT(0.0)LREILKK K:TMT10,s:Phosphorylated S WIZ 104190.1 3 15 195.1 461.51 HUMAN 1 -12.1441 -30.5656 TEWYVNGSPIDTLRE-p M0QXA7;S396-p TEWYVNGSPIDTLRE 0.506488151032777 0.00991769079995784 -0.0996666666666667 -0.593 5.45372442448457 28.1717116659734 -0.0996666666666667 -0.593 0.284857433811544 0.00152345220386058 -1.18659400318016 -5.8859922150008 M0QXA7 WIZ M0QXA7.S396.p_WIZ M0QXA7_S396s _1_1_396_396 M0QXA7 O95785|M0QXA7|O95785-3|O95785-4|B9EGQ5|O95785-2 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36334.36334.4 21.88 21.88 3.476 4 1 1 0 772.6544 3007.6327 S396s TMT10 385 (R) QMGVTEWYVNGsPIDTLREILK (R) Q(0.0)M(0.0)GVT(0.0)EWY(0.0)VN(0.0)GS(0.99)PIDT(0.0)LREILK K:TMT10,s:Phosphorylated S WIZ 104190.1 2 8 195.1 461.51 HUMAN 1 -5.4537 -28.1717 TEYEYSGSEEEEEEN-p Q9UKE5;S326-p TEYEYSGSEEEEEEN 0.468752455569706 0.251133757693258 0.108333333333333 0.168 6.07212170425593 7.90386842700181 0.108333333333333 0.168 0.247051690268482 0.16203661322886 1.29740129393477 1.61797346274078 Q9UKE5 TNIK Q9UKE5.S326.p_TNIK Q9UKE5_S324sS326s_2_2_324_326 Q9UKE5 Q9UKE5|Q9UKE5-4|Q9UKE5-2|Q9UKE5-6|Q9UKE5-3|Q9UKE5-7|Q9UKE5-5|Q9UKE5-8 TRAF2 and NCK-interacting protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25182.25182.4 24.44 24.44 1.774 10 2 2 0 1117.2198 4305.9116 S324s S326s TMT10 317 (K) DETEYEYsGsEEEEEENDSGEPSSILNLPGESTLRR (D) DET(0.0)EY(0.0)EY(0.0)S(0.99)GS(0.99)EEEEEENDS(0.0)GEPS(0.0)S(0.0)ILNLPGES(0.0)T(0.0)LRR s:Phosphorylated S TNIK 155453.9 10 47 131.1 535.29 HUMAN 1 6.0721 7.9039 TEYEYSGSEEEEEEV-p A0A0D9SEY1;S326-p TEYEYSGSEEEEEEV 0.996624147679768 0.0220632358795118 0.000666666666666663 0.354666666666667 0.0254692946294526 22.6291463037694 0.000666666666666651 0.354666666666667 0.994152640926957 0.00545865151707095 0.00767325060905435 4.46240726113429 A0A0D9SEY1 NotFound A0A0D9SEY1.S326.p_NotFound A0A0D9SEY1_S324sS326s_2_2_324_326 A0A0D9SEY1 O95819-3|A0A0D9SEY1|O95819-6|E7EN19|O95819-5 Mitogen-activated protein kinase kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21640.21640.4 25.14 25.14 1.596 9 2 2 0 1176.7504 4544.0434 S324s S326s TMT10 317 (K) DETEYEYsGsEEEEEEVPEQEGEPSSIVNVPGESTLRR (D) DET(0.0)EY(0.0)EY(0.0)S(0.99)GS(0.99)EEEEEEVPEQEGEPS(0.0)S(0.0)IVNVPGES(0.0)T(0.0)LRR s:Phosphorylated S MAP4K4 151879.6 8 13 131.2 535.29 HUMAN 1 0.0255 22.6291 TEYLCENSLEGKNKD-p Q9HBM0;S668-p TEYLCENSLEGKNKD 0.998180995519267 0.117757031448083 -0.000333333333333343 -0.207666666666667 0.0146564305638974 12.2495815706095 -0.000333333333333342 -0.207666666666667 0.996630920275235 0.0595719536511256 -0.00442107145131112 -2.37546883421823 Q9HBM0 VEZT Q9HBM0.S668.p_VEZT Q9HBM0_S668s _1_1_668_668 Q9HBM0 Q9HBM0 Vezatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16636.16636.3 11.46 11.46 7.045 3 1 1 0 660.986 1900.9727 S668s TMT10 661 (R) TEYLCENsLEGK (N) T(0.0)EY(0.0)LCENS(0.99)LEGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VEZT 89518.7 1 3 2200.1 93.61 HUMAN 1 -0.0147 -12.2496 TFAKFYRSVDYNMPR-p O95425-2;S888-p TFAKFYRSVDYNMPR 0.420320976430283 0.275550630208616 0.208333333333333 0.12 6.94515645455199 7.37691923588615 0.208333333333333 0.12 0.202061863791097 0.182939747959468 1.45140968481576 1.52639815804775 O95425 SVIL O95425.2.S888.p_SVIL O95425-2_S888s _1_1_888_888 O95425-2 O95425-3|O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15181.15181.3 14.4 14.4 6.75 3 1 1 0 586.2743 1676.8416 S888s TMT10 885 (K) FYRsVDYNMPR (S) FY(0.0)RS(0.99)VDY(0.0)NMPR s:Phosphorylated S SVIL 202384.1 1 19 406.2 324.74 HUMAN 1 6.9452 7.3769 TFFCGVCSDTDEDNG-p P49792;S2741-p TFFCGVCSDTDEDNG 0.490214660431765 0.592020135778882 0.0943333333333333 0.057 5.70671641507115 3.08067481150745 0.0943333333333333 0.057 0.268737553081344 0.491963087980623 1.23213618748095 0.736646165935822 P49792 RANBP2 P49792.S2741.p_RANBP2 P49792_S2741sT2743t_2_2_2741_2743 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28954.29573.5 23.81 23.81 3.723 5 2 2 0 1022.884 4950.4583 S2741s T2743t TMT10 2724 (K) AKADTLKLPPTFFCGVCsDtDEDNGNGEDFQSELQK (V) AKADT(0.0)LKLPPT(0.0)FFCGVCS(0.99)DT(0.99)DEDNGNGEDFQS(0.0)ELQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,t:Phosphorylated T RANBP2 362585.9 17 83 9.1 1298.62 HUMAN 1 5.7067 3.0807 TFGEGAESPGGQSCR-p A0A1B0GV68;S403-p TFGEGAESPGGQSCR 0.152026163448554 0.0679676595993386 0.299666666666667 0.210666666666667 16.4725167824024 15.534127756219 0.299666666666667 0.210666666666667 0.02252933235165 0.0279632228889701 3.159452436598 2.97721227861337 A0A1B0GV68 NotFound A0A1B0GV68.S403.p_NotFound A0A1B0GV68_S403s _1_1_403_403 A0A1B0GV68 Q9Y4F1-2|C9JME2|A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24392.24392.4 26.01 26.01 3.249 11 1 1 0 1077.2458 4225.9993 S403s TMT10 373 (R) SLASQPTELNSEVLEQSQQSTSLTFGEGAEsPGGQSCR (R) S(0.0)LAS(0.0)QPT(0.0)ELNS(0.0)EVLEQS(0.0)QQS(0.0)T(0.0)S(0.0)LT(0.0)FGEGAES(0.99)PGGQS(0.0)CR C:Carbamidomethylation,s:Phosphorylated S FARP1 88555.5 9 7 147.1 514.5 HUMAN 1 16.4725 15.5341 TFIKEAPSPTLRRKL-p P25054;S2449-p TFIKEAPSPTLRRKL 0.187304980558311 0.135151986947315 -0.203 -0.202333333333333 14.2754255993175 11.4576771196633 -0.203 -0.202333333333333 0.037364350732213 0.0714878585917172 -2.74362876632057 -2.23543743809044 P25054 APC P25054.S2449.p_APC P25054_S2449s _1_1_2449_2449 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8547.8547.3 8.85 6.99 2.723 2 1 1 0 393.8705 1099.6309 S2449s TMT10 2446 (K) EAPsPTLR (R) EAPS(0.99)PT(0.0)LR s:Phosphorylated S APC 313808.5 5 41 33.1 890.71 HUMAN 1 -14.2754 -11.4577 TFKHRKMTLVEEGFN-p O14975;T577-p TFKHRKMTLVEEGFN 0.163356162708595 0.710023965775972 0.287 0.0356666666666667 15.7609542854949 2.04607079813352 0.287 0.0356666666666667 0.0265402232332302 0.624299403803257 3.02242438635173 0.518919983995934 O14975 SLC27A2 O14975.T577.p_SLC27A2 O14975_T577t _1_1_577_577 O14975 O14975|O14975-2|G3V1R7 Very long-chain acyl-CoA synthetase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26609.26609.4 15.79 14.49 99 1 1 1 0 611.5989 2363.3976 T577t TMT10 575 (R) KMtLVEEGFNPAVIK (D) KMT(1.0)LVEEGFNPAVIK K:TMT10,t:Phosphorylated T SLC27A2 71109.8 2 1 5860.1 15.79 HUMAN 1 15.761 2.0461 TFKTRKASAQASLAS-p E7ETA6;S1283-p TFKTRKASAQASLAS 0.911438071310171 0.196270060085359 -0.0203333333333334 0.248 0.789967585357431 9.3012275594312 -0.0203333333333334 0.248 0.833687407028527 0.117456551002017 -0.220331182600025 1.85982657286399 E7ETA6 PCM1 E7ETA6.S1283.p_PCM1 E7ETA6_S1283s _1_1_1283_1283 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6877.6877.2 12.79 12.79 3.569 3 1 1 0 800.4466 1519.9208 S1283s Hydrogen 1281 (R) KAsAQASLASK (D) KAS(0.99)AQAS(0.0)LAS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S PCM1 229381.8 3 37 13.1 1159.95 HUMAN 1 -0.79 9.3012 TFLAQHASL______-p Q9NPA8;S100-p TFLAQHASL______ 0.880906925284752 0.281276960137963 -0.026 0.158333333333333 1.08398781797992 7.25937130202808 -0.026 0.158333333333333 0.779114376536593 0.187958889214502 -0.294815201488415 1.50591113897661 Q9NPA8 ENY2 Q9NPA8.S100.p_ENY2 Q9NPA8_S100s _1_1_100_100 Q9NPA8 Q9NPA8|Q9NPA8-2 Transcription and mRNA export factor ENY2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19392.19392.2 10.4 10.4 10.4 2 1 1 0 648.8322 1216.6887 S100s TMT10 93 (R) TFLAQHAsL (-) T(0.0)FLAQHAS(0.99)L s:Phosphorylated S ENY2 11642.5 1 1 6642.1 10.4 HUMAN 1 -1.084 7.2594 TFLERRKSQVAELND-p Q9BYG3;S247-p TFLERRKSQVAELND 0.0986992178204749 0.283045736802919 -0.579666666666667 0.171333333333333 21.276823844682 7.22755115439442 -0.579666666666667 0.171333333333333 0.00745276823006134 0.189341095067215 -4.15848745706209 1.50036088170552 Q9BYG3 NIFK Q9BYG3.S247.p_NIFK Q9BYG3_S247s _1_1_247_247 Q9BYG3 Q9BYG3 MKI67 FHA domain-interacting nucleolar phosphoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17121.17121.4 10.32 10.32 99 1 1 1 0 840.9514 3280.8195 S247s TMT10 245 (R) RKsQVAELNDDDKDDEIVFK (Q) RKS(1.0)QVAELNDDDKDDEIVFK K:TMT10,s:Phosphorylated S NIFK 34392.7 1 6 1531.1 133.75 HUMAN 1 -21.2768 7.2276 TFMEERGSPVSSLPA-p Q8NFD5-3;S1125-p TFMEERGSPVSSLPA 0.885069082704287 0.00834332988709938 -0.0366666666666667 0.764 1.04807154190402 29.5511988114404 -0.0366666666666667 0.764 0.785584391118891 0.001108868684743 -0.285893577345086 6.28695902686427 Q8NFD5 ARID1B Q8NFD5.3.S1125.p_ARID1B Q8NFD5-3_S1125s _1_1_1125_1125 Q8NFD5-3 Q8NFD5-3|Q8NFD5-2 Isoform 3 of AT-rich interactive domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26495.26495.3 17.01 12.17 1.518 5 1 1 0 902.8014 2626.4315 S1125s TMT10 1116 (R) YLTFMEERGsPVSSLPAVGK (K) Y(0.0)LT(0.0)FMEERGS(0.99)PVS(0.0)S(0.0)LPAVGK K:TMT10,s:Phosphorylated S ARID1B 242543.1 2 9 656.1 253.59 HUMAN 1 -1.0481 29.5512 TFPGPGSSPARAHQP-p O43187;S144-p TFPGPGSSPARAHQP 0.488013763728985 0.0145535069518938 -0.0953333333333333 -0.361333333333333 5.74026970437721 25.4418562471506 -0.0953333333333333 -0.361333333333333 0.266669305313292 0.00285636942243215 -1.23815328441074 -5.1499865144612 O43187 IRAK2 O43187.S144.p_IRAK2 O43187_S144s _1_1_144_144 O43187 O43187 Interleukin-1 receptor-associated kinase-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15236.15236.3 11.48 11.48 1.132 3 1 1 0 528.9202 1504.778 S144s TMT10 135 (R) MATFPGPGSsPAR (A) MAT(0.0)FPGPGS(0.0)S(0.99)PAR s:Phosphorylated S IRAK2 70573.1 2 1 6475.1 11.48 HUMAN 1 -5.7403 -25.4419 TFQARPLSADLTKLF-p Q9BY89;S508-p TFQARPLSADLTKLF 0.217359173580377 0.020552660688009 -0.290666666666667 -0.452333333333333 12.7680256807324 23.0865321382231 -0.290666666666667 -0.452333333333333 0.0528685539614523 0.00491300024936218 -2.46934921107602 -4.56977037284497 Q9BY89 KIAA1671 Q9BY89.S508.p_KIAA1671 Q9BY89_S508s _1_1_508_508 Q9BY89 Q9BY89 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18150.18150.3 13.58 13.58 2.695 3 1 1 0 662.6995 1906.1162 S508s TMT10 501 (R) TFQARPLsADLTK (L) T(0.0)FQARPLS(0.99)ADLT(0.0)K K:TMT10,s:Phosphorylated S KIAA1671 197734.4 3 10 105.1 590.35 HUMAN 1 -12.768 -23.0865 TFQNRPDSRLGKTEL-p Q9BYW2;S1228-p TFQNRPDSRLGKTEL 0.0593125796096809 0.00570011283768187 0.418333333333333 0.574333333333333 26.8217442813691 32.5020012513263 0.418333333333333 0.574333333333334 0.00207886157453577 0.000562082255108259 5.52046432816138 7.2182743302537 Q9BYW2 SETD2 Q9BYW2.S1228.p_SETD2 Q9BYW2_S1228s _1_1_1228_1228 Q9BYW2 Q9BYW2|Q9BYW2-2|Q9BYW2-3 Histone-lysine N-methyltransferase SETD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10508.10508.3 11.22 11.22 4.347 4 1 1 0 687.3229 1979.9885 S1228s TMT10 1216 (K) SWQQTTFQNRPDsR (L) S(0.0)WQQT(0.0)T(0.0)FQNRPDS(0.99)R s:Phosphorylated S SETD2 290615.4 2 20 58.1 711.11 HUMAN 1 26.8217 32.502 TFRCSSASWGEGLVT-p Q9ULM0;S281-p TFRCSSASWGEGLVT 0.975063432265327 0.439187683749576 -0.00600000000000001 -0.0816666666666667 0.211884471285203 4.76061840225709 -0.006 -0.0816666666666667 0.95238282063765 0.334147456586198 -0.0625335976426283 -1.05979624824242 Q9ULM0 PLEKHH1 Q9ULM0.S281.p_PLEKHH1 Q9ULM0_S281s _1_1_281_281 Q9ULM0 Q9ULM0 Pleckstrin homology domain-containing family H member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17929.17929.2 14.83 14.83 2.257 4 1 1 0 959.4414 1837.9064 S281s TMT10 277 (R) CSSAsWGEGLVTAQR (G) CS(0.0)S(0.0)AS(0.99)WGEGLVT(0.0)AQR C:Carbamidomethylation,s:Phosphorylated S PLEKHH1 152827.1 2 5 981.1 192.43 HUMAN 1 -0.2119 -4.7606 TFRLKTRSWAGERSR-p P30305;S563-p TFRLKTRSWAGERSR 0.391964244361836 0.000952253650599092 -0.137 -1.71566666666667 7.50077123926946 59.8593937742372 -0.137 -1.71566666666667 0.17779636433873 1.03290557758407e-06 -1.54841667031236 -23.9801385235904 P30305 CDC25B P30305.S563.p_CDC25B P30305_S563s _1_1_563_563 P30305 P30305-4 M-phase inducer phosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4866.4866.3 10.35 10.35 1.337 2 1 1 0 424.5413 1191.6432 S563s TMT10 561 (K) TRsWAGER (S) T(0.0)RS(0.99)WAGER s:Phosphorylated S CDC25B 65671 2 13 563.1 271.52 HUMAN 1 -7.5008 -59.8594 TFRNDCRSPTHLTVS-p Q15652;S1185-p TFRNDCRSPTHLTVS 0.325611631944441 0.280293869381939 0.21 0.128 9.12445490504894 7.27941116821797 0.21 0.128 0.122336065677558 0.187093579124588 1.82990887852466 1.50940561674597 Q15652 JMJD1C Q15652.S1185.p_JMJD1C Q15652_S1185s _1_1_1185_1185 Q15652 Q15652|Q15652-3|A0A1W2PNZ9|Q15652-2 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7850.7850.4 16.3 16.3 1.125 7 1 1 0 592.7869 2288.1615 S1185s TMT10 1181 (R) NDCRsPTHLTVSSTNTLR (S) NDCRS(0.99)PT(0.0)HLT(0.0)VS(0.0)S(0.0)T(0.0)NT(0.0)LR C:Carbamidomethylation,s:Phosphorylated S JMJD1C 286573.8 2 13 377.1 336.35 HUMAN 1 9.1245 7.2794 TFSCLGGSDNFKHLN-p A0A087WYT3;S48-p TFSCLGGSDNFKHLN 0.58471981560589 0.0192506813728733 -0.0933333333333333 0.355666666666667 4.28706461948655 23.5719214544113 -0.0933333333333334 0.355666666666667 0.37264348952645 0.00439347191513742 -0.971619746435279 4.68552822710833 A0A087WYT3 PTGES3 A0A087WYT3.S48.p_PTGES3 A0A087WYT3_S48s _1_1_48_48 A0A087WYT3 A0A087WYT3|Q15185|Q15185-4|Q15185-3|Q15185-2 Prostaglandin E synthase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26018.26018.3 16.31 16.31 6.283 3 1 1 0 661.994 1903.9988 S48s TMT10 40 (K) LTFSCLGGsDNFK (H) LT(0.0)FS(0.0)CLGGS(0.99)DNFK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PTGES3 19439.9 4 2 1781.1 115.3 HUMAN 1 -4.2871 23.5719 TFSENLSSKQDIRGT-p Q2LD37;S1682-p TFSENLSSKQDIRGT 0.317306012127297 0.0282445461716627 -0.165333333333333 0.340333333333333 9.33646114957701 20.9895590414506 -0.165333333333333 0.340333333333333 0.116507500458192 0.00796240192129689 -1.86662309695862 4.09054091581019 Q2LD37 KIAA1109 Q2LD37.S1682.p_KIAA1109 Q2LD37_S1682s _1_1_1682_1682 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7|Q2LD37-6 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15115.15115.3 11.54 11.54 1.116 5 1 1 0 551.2831 1571.8681 S1682s TMT10 1674 (K) TTFSENLSsK (Q) T(0.0)T(0.0)FS(0.0)ENLS(0.0)S(0.99)K K:TMT10,s:Phosphorylated S KIAA1109 559693.9 4 10 143.1 520.8 HUMAN 1 -9.3365 20.9896 TFSPQRVSPTTSPRP-p Q99501;S297-p TFSPQRVSPTTSPRP 0.373673559607983 0.288689972755116 0.139 0.116333333333333 7.92267583118233 7.11866605548328 0.139 0.116333333333333 0.161336420376682 0.194148211628247 1.6217440087907 1.48135326770621 Q99501 GAS2L1 Q99501.S297.p_GAS2L1 Q99501_S297s _1_1_297_297 Q99501 Q99501|A0A5E8|Q99501-4|Q99501-2 GAS2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13259.13259.4 14.81 8.56 1.725 8 1 1 0 777.3911 3026.5679 S297s TMT10 288 (R) VCTFSPQRVsPTTSPRPASPVPGSER (R) VCT(0.0)FS(0.0)PQRVS(0.99)PT(0.0)T(0.0)S(0.0)PRPAS(0.0)PVPGS(0.0)ER C:Carbamidomethylation,s:Phosphorylated S GAS2L1 73400.1 3 2 1084.1 179.86 HUMAN 1 7.9227 7.1187 TFSTNYRSLGSVQAP-p P05783;S15-p TFSTNYRSLGSVQAP 0.254904931587033 0.568777056722404 0.170666666666667 -0.0633333333333333 11.2943773943127 3.30160564137527 0.170666666666667 -0.0633333333333333 0.0742270602216235 0.467562245679706 2.20776433761161 -0.780917355017884 P05783 KRT18 P05783.S15.p_KRT18 P05783_S15s _1_1_15_15 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14809.14809.3 26.22 24.19 4.264 10 1 1 0 978.7985 2854.4078 S15s Hydrogen 15 (R) sLGSVQAPSYGARPVSSAASVYAGAGGSGSR (I) S(0.99)LGS(0.0)VQAPS(0.0)Y(0.0)GARPVS(0.0)S(0.0)AAS(0.0)VY(0.0)AGAGGS(0.0)GS(0.0)R s:Phosphorylated S KRT18 48057 9 5 89.1 623.62 HUMAN 1 11.2944 -3.3016 TFTDENPSETEESEA-p Q96JN0-3;S759-p TFTDENPSETEESEA 0.359204648614872 0.20530350975983 -0.160333333333333 -0.134666666666667 8.26278618129471 9.04849965320993 -0.160333333333333 -0.134666666666667 0.149183702647375 0.124494462554018 -1.68071892099095 -1.81610171513811 Q96JN0 LCOR Q96JN0.3.S759.p_LCOR Q96JN0-3_S759s_1_1_759_759 Q96JN0-3 Q96JN0-3|A0A1P0AZG4 Isoform 3 of Ligand-dependent corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21297.21297.4 22.56 22.56 1.133 7 1 1 0 1046.4879 4101.9715 N757n S759s TMT10 749 (K) ESSTFTDEnPsETEESEAAGGIGKLEGEDGDVK (C) ES(0.0)S(0.0)T(0.0)FT(0.0)DEN(1.0)PS(0.99)ET(0.0)EES(0.0)EAAGGIGKLEGEDGDVK K:TMT10,n:Deamidated,s:Phosphorylated S LCOR 172300.7 3 10 673.1 247.79 HUMAN 1 -8.2628 -9.0485 TFTDNAPSPSIGSAS-p Q9ULD9;S895-p TFTDNAPSPSIGSAS 0.706419353402032 0.0105822774859557 0.0793333333333333 0.415 2.83799243518206 27.7047027365155 0.0793333333333333 0.415 0.52023642486746 0.00169640571292611 0.68731016021777 5.75483716292167 Q9ULD9 ZNF608 Q9ULD9.S895.p_ZNF608 Q9ULD9_S895s _1_1_895_895 Q9ULD9 Q9ULD9|Q9ULD9-2 Zinc finger protein 608 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19462.19462.3 13.83 13.83 2.955 7 1 1 0 727.0161 2099.0607 S895s TMT10 886 (K) VYTFTDNAPsPSIGSASR (L) VY(0.0)T(0.0)FT(0.0)DNAPS(0.99)PS(0.0)IGS(0.0)AS(0.0)R s:Phosphorylated S ZNF608 163232.5 2 6 1226.1 164.42 HUMAN 1 2.838 27.7047 TFTGEPNTCPRCSKK-p P52943;T125-p TFTGEPNTCPRCSKK 0.886221562371414 0.67269233033244 0.0236666666666667 -0.0406666666666667 1.02367315026332 2.35503634960119 0.0236666666666667 -0.0406666666666667 0.790010175211501 0.581428565844373 0.279806091693221 -0.585994252468875 P52943 CRIP2 P52943.T125.p_CRIP2 P52943_T125t _1_1_125_125 P52943 P52943-2 Cysteine-rich protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13082.13082.2 19.88 19.88 3.1 6 1 1 0 1017.4643 1953.9538 T125t TMT10 113 (R) ASSVTTFTGEPNtCPR (C) AS(0.0)S(0.0)VT(0.0)T(0.0)FT(0.0)GEPNT(0.99)CPR C:Carbamidomethylation,t:Phosphorylated T CRIP2 23291.1 4 6 1870.1 109.93 HUMAN 1 1.0237 -2.355 TFVKRHLTGEFEKKY-p B5MDF5;T32-p TFVKRHLTGEFEKKY 0.123743629200835 0.00363468033649404 -0.347 -0.651 18.8755552023869 36.2547771822673 -0.347 -0.651 0.0129552106742107 0.000236876665984837 -3.64167968225943 -8.56781657566569 B5MDF5 NotFound B5MDF5.T32.p_NotFound B5MDF5_T32t _1_1_32_32 B5MDF5 B5MDF5|P62826 GTP-binding nuclear protein Ran HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12288.12288.3 8.52 8.52 99 1 1 1 0 500.2613 1418.8044 T32t TMT10 30 (R) HLtGEFEK (K) HLT(1.0)GEFEK K:TMT10,t:Phosphorylated T RAN 26394.9 2 1 4221.1 35.16 HUMAN 1 -18.8756 -36.2548 TGACLNDSDDDSPDL-p Q9UPP1;S589-p TGACLNDSDDDSPDL 0.863089088408807 0.751582701181189 -0.0593333333333333 0.0693333333333334 1.24733484976295 1.71330156529255 -0.0593333333333333 0.0693333333333334 0.750354540784171 0.674015437247149 -0.334818651758755 0.444282046683928 Q9UPP1 PHF8 Q9UPP1.S589.p_PHF8 Q9UPP1_S589s_1_1_589_589 Q9UPP1 Q9UPP1|Q9UPP1-2|Q9UPP1-5 Histone lysine demethylase PHF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.35729.35729.4 12.66 12.66 1.122 7 1 1 0 1220.5848 4798.3642 S589s N601n TMT10 577 (K) AKFNITGACLNDsDDDSPDLDLDGnESPLALLMSNGSTK (R) AKFN(0.0)IT(0.0)GACLN(0.0)DS(0.99)DDDS(0.0)PDLDLDGN(0.99)ES(0.0)PLALLMS(0.0)N(0.0)GS(0.0)T(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated PHF8 118946 1 19 376.1 336.84 HUMAN 1 -1.2473 1.7133 TGAFRVPSPGMEEAG-p Q96RL1;S653-p TGAFRVPSPGMEEAG 0.283177951218012 0.0804631930205119 0.156 0.208333333333333 10.3564763469456 14.5176249659303 0.156 0.208333333333333 0.0921196682568943 0.0353376368531966 2.0437163914691 2.7867142098011 Q96RL1 UIMC1 Q96RL1.S653.p_UIMC1 Q96RL1_S653s _1_1_653_653 Q96RL1 Q96RL1|Q96RL1-3|Q96RL1-2|Q96RL1-4 BRCA1-A complex subunit RAP80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15154.15360.3 16.6 12.92 2.59 5 1 1 0 841.0396 2441.1387 S653s TMT10 643 (K) SSETGAFRVPsPGMEEAGCSR (E) S(0.0)S(0.0)ET(0.0)GAFRVPS(0.99)PGMEEAGCS(0.0)R C:Carbamidomethylation,s:Phosphorylated S UIMC1 80924.2 11 15 339.1 354.34 HUMAN 1 10.3565 14.5176 TGAGLSESEAEPDGD-p A0A0B4J1V8;S240-p TGAGLSESEAEPDGD 0.195880649499579 0.437391084328058 0.2 0.0733333333333334 13.8075696876622 4.78436355615966 0.2 0.0733333333333334 0.0416143419245418 0.332325482815654 2.6576554799593 1.06418199076888 A0A0B4J1V8 PPAN-P2RY11 A0A0B4J1V8.S240.p_PPAN-P2RY11 A0A0B4J1V8_S238sS240s_2_2_238_240 A0A0B4J1V8 A0A0B4J1V8|Q9NQ55|Q9NQ55-2|A8MV53|Q9NQ55-3 HCG2039996 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35356.35758.3 28.54 28.54 1.583 5 2 2 0 1398.3226 4033.0199 S238s S240s TMT10 224 (R) LQDISELLATGAGLsEsEAEPDGDHNITELPQAVAGR (G) LQDIS(0.0)ELLAT(0.0)GAGLS(0.99)ES(0.99)EAEPDGDHNIT(0.0)ELPQAVAGR s:Phosphorylated S PPAN-P2RY11 89000.3 15 4 3312.1 54.23 HUMAN 1 13.8076 4.7844 TGAILPPSPKVEIMP-p P11182;S220-p TGAILPPSPKVEIMP 0.710316644870655 0.0906214302842745 0.0606666666666667 0.215 2.79390842180337 13.7963187262729 0.0606666666666667 0.215 0.525544091479148 0.0417222890355374 0.678232633558917 2.65403377941673 P11182 DBT P11182.S220.p_DBT P11182_S220s _1_1_220_220 P11182 P11182 Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22674.22674.5 20.72 20.72 11.506 2 1 1 0 664.5959 3238.9771 S220s TMT10 212 (K) QTGAILPPsPKVEIMPPPPKPK (D) QT(0.0)GAILPPS(0.99)PKVEIMPPPPKPK K:TMT10,s:Phosphorylated S DBT 53885.5 2 1 4332.1 33.35 HUMAN 1 2.7939 13.7963 TGATATVSPKEILNL-p Q86TU7;S21-p TGATATVSPKEILNL 0.30451465433125 0.323980098196946 0.211666666666667 0.215 9.67711701875362 6.47344887635271 0.211666666666667 0.215 0.107718004180674 0.225244975674318 1.92566514637898 1.36814047101619 Q86TU7 SETD3 Q86TU7.S21.p_SETD3 Q86TU7_S21s _1_1_21_21 Q86TU7 Q86TU7|Q86TU7-2|Q6NXR6|Q86TU7-3|C9K0W5 Histone-lysine N-methyltransferase setd3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37356.37356.4 24.6 23.75 1.142 7 1 1 0 807.2047 3145.8287 S21s TMT10 12 (K) SGTGATATVsPKEILNLTSELLQK (C) S(0.0)GT(0.0)GAT(0.0)AT(0.0)VS(0.99)PKEILNLT(0.0)S(0.0)ELLQK K:TMT10,s:Phosphorylated S SETD3 67598.2 4 2 1648.1 123.62 HUMAN 1 9.6771 6.4734 TGAVPAASPDTAAWR-p Q9H6Z4-3;S143-p TGAVPAASPDTAAWR 0.95572771746963 0.317612360801361 0.0106666666666667 0.116 0.386712545421805 6.5841637907115 0.0106666666666667 0.116 0.914805454600279 0.219575368830672 0.112073183548867 1.38764755111456 Q9H6Z4 RANBP3 Q9H6Z4.3.S143.p_RANBP3 Q9H6Z4-3_S143s _1_1_143_143 Q9H6Z4-3 Q9H6Z4|Q9H6Z4-2|Q9H6Z4-3|B7Z7F3 Isoform 3 of Ran-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23890.23890.3 25.06 22.56 2.445 9 1 1 0 1241.262 3641.8067 S143s TMT10 116 (K) ALSQTVPSSGTNGVSLPADCTGAVPAAsPDTAAWR (S) ALS(0.0)QT(0.0)VPS(0.0)S(0.0)GT(0.0)NGVS(0.0)LPADCT(0.0)GAVPAAS(0.99)PDT(0.0)AAWR C:Carbamidomethylation,s:Phosphorylated S RANBP3 53752.1 6 7 444.1 311.24 HUMAN 1 0.3867 6.5842 TGDEEDGSPIALHRG-p P79522-2;S33-p TGDEEDGSPIALHRG 0.862120390295491 0.988816554047082 -0.0676666666666667 0.00266666666666672 1.25825590149027 0.0741161361454354 -0.0676666666666667 0.0026666666666667 0.748470020876084 0.983078926086661 -0.337460973717903 0.022204712583741 P79522 PRR3 P79522.2.S33.p_PRR3 P79522-2_S33s _1_1_33_33 P79522-2 P79522-2 Isoform 2 of Proline-rich protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8666.8666.5 22.09 22.09 1.386 3 1 1 0 816.185 3996.9386 S33s TMT10 7 (K) QNHHQPPTQQQPPLPEREETGDEEDGsPIALHR (G) QNHHQPPT(0.0)QQQPPLPEREET(0.0)GDEEDGS(0.99)PIALHR s:Phosphorylated S PRR3 18872 1 1 3823.1 42.44 HUMAN 1 -1.2583 0.0741 TGDEKDVSV______-p Q16543;S377-p TGDEKDVSV______ 0.113082501108835 0.0215463791385832 0.550666666666667 -0.759333333333333 19.7637165728263 22.7857535291378 0.550666666666667 -0.759333333333334 0.0105591350070001 0.00526531850271591 3.82842389916807 -4.49898339419127 Q16543 CDC37 Q16543.S377.p_CDC37 Q16543_S377s _1_1_377_377 Q16543 Q16543 Hsp90 co-chaperone Cdc37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10865.10865.3 9.97 8.13 8.96 2 1 1 0 496.5842 1407.7731 S377s TMT10 370 (K) TGDEKDVsV (-) T(0.0)GDEKDVS(0.99)V K:TMT10,s:Phosphorylated S CDC37 44981 2 4 2274.1 90.25 HUMAN 1 19.7637 -22.7858 TGDGVNDSPALKKAD-p P05023-4;S722-p TGDGVNDSPALKKAD 0.87074133562184 0.628145385991348 -0.026 0.046 1.17793098467189 2.74567083119156 -0.026 0.046 0.762442157352296 0.53141390853515 -0.317933714343092 0.668174890311644 P05023 ATP1A1 P05023.4.S722.p_ATP1A1 P05023-4_S722s _1_1_722_722 P05023-4 A0A0A0MT26|P13637-3|P13637-2|M0R116|P05023|P05023-4|P50993|B1AKY9|P05023-3 Isoform 4 of Sodium/potassium-transporting ATPase subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20739.20739.3 13.61 13.61 3.32 2 1 1 0 784.0822 2270.2756 S722s TMT10 708 (R) QGAIVAVTGDGVNDsPALK (K) QGAIVAVT(0.0)GDGVNDS(0.99)PALK K:TMT10,s:Phosphorylated S ATP1A1 114310.4 2 9 1313.1 155.17 HUMAN 1 -1.1779 2.7457 TGDSLRESKVNGDDH-p Q05519-2;S467-p TGDSLRESKVNGDDH 0.698700102955885 0.591456847613761 0.106666666666667 -0.0563333333333333 2.92667646093006 3.08608581944616 0.106666666666667 -0.0563333333333333 0.509720797479301 0.491350517793745 0.705479704159652 -0.73773844931926 Q05519 SRSF11 Q05519.2.S467.p_SRSF11 Q05519-2_S467s _1_1_467_467 Q05519-2 Q05519|Q05519-2|Q5T757 Isoform 2 of Serine/arginine-rich splicing factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5819.5819.3 8.1 3.66 2.648 3 1 1 0 529.9432 1507.848 S467s TMT10 459 (K) GTGDSLREsK (V) GT(0.0)GDS(0.0)LRES(0.99)K K:TMT10,s:Phosphorylated S SRSF11 53527.2 2 12 185.1 475.04 HUMAN 1 2.9267 -3.0861 TGDSRRYTDGMLPFS-p Q8TEP8-3;T321-p TGDSRRYTDGMLPFS 0.734482909449918 0.442004856543608 -0.0513333333333333 -0.083 2.53759577255817 4.72027741918162 -0.0513333333333334 -0.083 0.557494288917941 0.337265764065382 -0.624819448171506 -1.05233612271468 Q8TEP8 NotFound Q8TEP8.3.T321.p_NotFound Q8TEP8-3_T321t _1_1_321_321 Q8TEP8-3 Q8TEP8-3 Isoform 3 of Centrosomal protein of 192 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24601.24601.3 15.08 15.08 5.46 6 1 1 0 857.7523 2491.2692 T321t TMT10 319 (R) RYtDGMLPFSSGTWGTEK (E) RY(0.0)T(0.99)DGMLPFS(0.0)S(0.0)GT(0.0)WGT(0.0)EK K:TMT10,t:Phosphorylated T CEP192 281787.5 1 3 491.1 293.99 HUMAN 1 -2.5376 -4.7203 TGEGLLDSPSKTMSI-p O95425-2;S694-p TGEGLLDSPSKTMSI 0.339304286904335 0.00210526610385868 -0.135666666666667 -0.777333333333333 8.73209023290178 41.6255904257319 -0.135666666666667 -0.777333333333333 0.133903206433119 6.87766403732599e-05 -1.76198736627683 -10.8872535302175 O95425 SVIL O95425.2.S694.p_SVIL O95425-2_S694s _1_1_694_694 O95425-2 O95425|O95425-3|O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25853.25866.4 24.65 24.65 4.549 4 1 1 0 840.4347 3278.7368 S694s TMT10 673 (K) NPCAMFAAGEIKTPTGEGLLDsPSK (T) NPCAMFAAGEIKT(0.0)PT(0.0)GEGLLDS(0.99)PS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SVIL 202384.1 7 18 406.2 324.74 HUMAN 1 -8.7321 -41.6256 TGEKLRLSAHTILPG-p Q6UB99;S429-p TGEKLRLSAHTILPG 0.164162708749184 0.146712963973988 -0.385333333333333 -0.333 15.7193269509477 10.9762626072239 -0.385333333333333 -0.333 0.0267958356183241 0.0798681710326577 -3.01448173073109 -2.15098393490781 Q6UB99 ANKRD11 Q6UB99.S429.p_ANKRD11 Q6UB99_S429s _1_1_429_429 Q6UB99 Q6UB99 Ankyrin repeat domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18959.18959.4 7.91 7.91 1.31 3 1 1 0 483.5366 1851.158 S429s TMT10 426 (K) LRLsAHTILPGSK (T) LRLS(0.99)AHT(0.0)ILPGS(0.0)K K:TMT10,s:Phosphorylated S ANKRD11 299790.8 3 7 340.1 353.72 HUMAN 1 -15.7193 -10.9763 TGEMNIHSPSDVLGK-p Q7Z7A1;S831-p TGEMNIHSPSDVLGK 0.576942500702552 0.803011694038898 -0.0733333333333333 -0.029 4.39474140860698 1.33354323440501 -0.0733333333333333 -0.029 0.363517948803181 0.735606700619427 -0.99187195203953 -0.355534570946753 Q7Z7A1 CNTRL Q7Z7A1.S831.p_CNTRL Q7Z7A1_S831s _1_1_831_831 Q7Z7A1 Q7Z7A1|Q7Z7A1-5|Q7Z7A1-2|Q5JVD1 Centriolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21204.21204.4 18.94 18.94 1.606 3 1 1 0 574.048 2213.2 S831s TMT10 822 (K) LGTGEMNIHsPSDVLGK (S) LGT(0.0)GEMNIHS(0.99)PS(0.0)DVLGK K:TMT10,s:Phosphorylated S CNTRL 270021.9 4 1 3035.1 62.53 HUMAN 1 -4.3947 -1.3335 TGEPGDSSDREPGRP-p J3KNZ9;S190-p TGEPGDSSDREPGRP 0.885820345057877 0.00238856624082869 -0.0496666666666667 0.838666666666667 1.03559861058907 40.2282808401064 -0.0496666666666667 0.838666666666667 0.787843831369249 9.48793970199867e-05 -0.282784280452112 10.2345201465178 J3KNZ9 FBRS J3KNZ9.S190.p_FBRS J3KNZ9_S189sS190s_2_2_189_190 J3KNZ9 J3KNZ9 Probable fibrosin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4589.4589.4 10.53 7.44 2.927 5 2 2 0 697.5459 2627.2243 S189s S190s TMT10 177 (R) GGSSGATGEPGDssDREPGRPPGDR (A) GGS(0.0)S(0.0)GAT(0.0)GEPGDS(0.99)S(0.99)DREPGRPPGDR s:Phosphorylated S FBRS 104109.7 2 12 767.1 229.08 HUMAN 1 -1.0356 40.2283 TGEPYRLSPEPTPLA-p Q04637-9;S321-p TGEPYRLSPEPTPLA 0.249214669457312 0.0760393773593732 -0.485333333333333 0.239 11.5115315786922 14.8517660662553 -0.485333333333333 0.239 0.070606850891848 0.0327207608263315 -2.24598122761638 2.84885922916386 Q04637 EIF4G1 Q04637.9.S321.p_EIF4G1 Q04637-9_S321s _1_1_321_321 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1|Q04637-4|E7EX73|Q04637-5|Q04637-7|Q04637-6 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36407.36407.3 20.31 20.31 1.204 6 1 1 0 1211.6387 3552.9453 S321s TMT10 313 (R) ETGEPYRLsPEPTPLAEPILEVEVTLSK (P) ET(0.0)GEPY(0.0)RLS(0.99)PEPT(0.0)PLAEPILEVEVT(0.0)LS(0.0)K K:TMT10,s:Phosphorylated S EIF4G1 176975.4 5 6 107.1 585.61 HUMAN 1 -11.5115 14.8518 TGFAGIDSSSPEVKG-p Q15365;S262-p TGFAGIDSSSPEVKG 0.0431670381948327 0.00575580310919068 -0.501333333333333 -0.507333333333333 30.3127552643995 32.3951468725339 -0.501333333333333 -0.507333333333333 0.000930517346490253 0.000576083335869308 -6.52784729483785 -7.18267566917583 Q15365 PCBP1 Q15365.S262.p_PCBP1 Q15365_S262s_1_1_262_262 Q15365 Q15365 Poly(rC)-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16835.16835.3 13.1 13.1 1.182 5 1 1 0 972.0967 2835.3392 Q244q M251m S262s Hydrogen 244 (R) qQSHFAMmHGGTGFAGIDsSSPEVK (G) Q(1.0)QS(0.0)HFAM(0.0)M(0.99)HGGT(0.0)GFAGIDS(0.99)S(0.0)S(0.0)PEVK K:TMT10-Lys-Only,q:Pyroglutamic acid,m:Oxidized methionine,s:Phosphorylated S PCBP1 38010.7 33 5 1412.1 145.32 HUMAN 1 -30.3128 -32.3951 TGFRTISSLEEIVEK-p Q8IY95;S230-p TGFRTISSLEEIVEK 0.830066763884722 0.0049895765153361 0.035 0.558333333333333 1.55723945432524 33.5704746119959 0.035 0.558333333333333 0.698676369002171 0.000439493583437979 0.408352807968882 7.58248768522825 Q8IY95 TMEM192 Q8IY95.S230.p_TMEM192 Q8IY95_S230s _1_1_230_230 Q8IY95 Q8IY95|Q8IY95-2 Transmembrane protein 192 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28666.28666.2 14.16 10.2 1.163 3 1 1 0 893.4845 1705.9988 S230s TMT10 227 (R) TISsLEEIVEK (Q) T(0.0)IS(0.0)S(0.99)LEEIVEK K:TMT10,s:Phosphorylated S TMEM192 31321.1 2 2 4391.1 32.13 HUMAN 1 1.5572 33.5705 TGGGGQESQPSPLAL-p P08047;S56-p TGGGGQESQPSPLAL 0.157598656025864 0.782938833701111 0.247333333333333 0.028 16.0955371264933 1.47159079808883 0.247333333333333 0.028 0.024572327069279 0.712591963587469 3.08655595948933 0.38827817002845 P08047 SP1 P08047.S56.p_SP1 P08047_S56s _1_1_56_56 P08047 P08047|P08047-2 Transcription factor Sp1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.26827.27095.3 15.2 15.2 2.166 13 1 1 0 1078.8313 3154.512 S56s TMT10 40 (R) SSSTGSSSSTGGGGQEsQPSPLALLAATCSR (I) S(0.0)S(0.0)S(0.0)T(0.0)GS(0.0)S(0.0)S(0.0)S(0.0)T(0.0)GGGGQES(0.99)QPS(0.0)PLALLAAT(0.0)CS(0.0)R C:Carbamidomethylation,s:Phosphorylated S SP1 81319.2 2 4 1269.1 160.02 HUMAN 1 16.0955 1.4716 TGHFTARSLHFPATT-p Q8NEV8;S341-p TGHFTARSLHFPATT 0.674071856956608 0.487680792388778 0.0633333333333333 -0.0663333333333333 3.21073133771983 4.16713086144254 0.0633333333333334 -0.0663333333333333 0.477448866058396 0.383077737581181 0.762898642772528 -0.948779340146224 Q8NEV8 EXPH5 Q8NEV8.S341.p_EXPH5 Q8NEV8_S341s _1_1_341_341 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15554.15554.4 16.95 16.95 10.914 4 1 1 0 439.4873 1674.9579 S341s TMT10 341 (R) sLHFPATTQSK (S) S(0.99)LHFPAT(0.0)T(0.0)QS(0.0)K K:TMT10,s:Phosphorylated S EXPH5 223884.5 4 2 129.1 537.25 HUMAN 1 3.2107 -4.1671 TGHKRSTSEGAWPQL-p G3V1A6;S300-p TGHKRSTSEGAWPQL 0.712174965944561 0.0792603482411338 -0.0513333333333333 -0.224333333333333 2.77372504664635 14.6098704259935 -0.0513333333333333 -0.224333333333333 0.527992186095356 0.0345949699260482 -0.674066257034052 -2.80382571388919 G3V1A6 NotFound G3V1A6.S300.p_NotFound G3V1A6_S300s _1_1_300_300 G3V1A6 G3V1A6|P57764 Gasdermin domain containing 1, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29676.29676.2 13.79 13.79 1.155 5 1 1 0 1122.5265 2164.0728 S300s TMT10 298 (R) STsEGAWPQLPSGLSMMR (C) S(0.0)T(0.0)S(0.99)EGAWPQLPS(0.0)GLS(0.0)MMR s:Phosphorylated S GSDMD 58304.1 9 4 2053.1 100.32 HUMAN 1 -2.7737 -14.6099 TGHRVTYSPRKEKAL-p Q96K76;S1353-p TGHRVTYSPRKEKAL 0.572301168829667 0.0112026247211785 -0.0946666666666667 -0.836666666666667 4.46477503695932 27.3135781595118 -0.0946666666666667 -0.836666666666667 0.357702928984686 0.00185627443726757 -1.00499283665549 -5.64671266926277 Q96K76 USP47 Q96K76.S1353.p_USP47 Q96K76_S1353s _1_1_1353_1353 Q96K76 Q96K76|Q96K76-4|Q96K76-2|Q96K76-3 Ubiquitin carboxyl-terminal hydrolase 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8541.8748.3 8.94 3.94 1.342 3 1 1 0 463.5951 1308.804 S1353s TMT10 1350 (R) VTYsPRK (E) VT(0.0)Y(0.0)S(0.99)PRK K:TMT10,s:Phosphorylated S USP47 158677.8 5 11 770.1 227.83 HUMAN 1 -4.4648 -27.3136 TGHSLFDSDVDMDDY-p Q5TGI0;S395-p TGHSLFDSDVDMDDY 0.148266672319898 0.135364189729409 0.317 0.286 16.746673590961 11.4481308878441 0.317 0.286 0.0211510845302528 0.0716451689616143 3.21290513674853 2.23375821343473 Q5TGI0 FAXC Q5TGI0.S395.p_FAXC Q5TGI0_S395s _1_1_395_395 Q5TGI0 Q5TGI0|Q5TGI0-2 Failed axon connections homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22213.22213.4 20.98 20.98 2.521 7 1 1 0 958.1534 3749.626 S395s TMT10 382 (R) TPDTDFTGHSLFDsDVDMDDYTDHEQCK (-) T(0.0)PDT(0.0)DFT(0.0)GHS(0.0)LFDS(0.99)DVDMDDY(0.0)T(0.0)DHEQCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FAXC 47184.6 1 1 5285.1 20.98 HUMAN 1 16.7467 11.4481 TGIQEPQTDETRNSP-p Q9H2Y7;T394-p TGIQEPQTDETRNSP 0.145152146047681 0.0090396054976354 -0.284 -0.501 17.1012267879019 28.9157719731415 -0.284 -0.501 0.0194929388865156 0.00128357958957643 -3.28259894748035 -6.09969707128785 Q9H2Y7 ZNF106 Q9H2Y7.T394.p_ZNF106 Q9H2Y7_T394t _1_1_394_394 Q9H2Y7 Q9H2Y7 Zinc finger protein 106 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32822.32822.5 24.47 20.03 1.108 8 1 1 0 910.4716 4468.3525 T394t TMT10 372 (K) SEMIEKPLFDFSLITTGIQEPQtDETRNSPTQK (T) S(0.0)EMIEKPLFDFS(0.0)LIT(0.0)T(0.0)GIQEPQT(0.99)DET(0.0)RNS(0.0)PT(0.0)QK K:TMT10,t:Phosphorylated T ZNF106 210818.9 14 1 170.1 490.3 HUMAN 1 -17.1012 -28.9158 TGIRKGISPMNRPPL-p Q96QD9;S118-p TGIRKGISPMNRPPL 0.175566091093158 0.0114444250909767 -0.271 -0.464333333333333 15.0272694630549 27.1694444918867 -0.271 -0.464333333333333 0.0314248384477066 0.00191891417418724 -2.88356714926044 -5.60725606184727 Q96QD9 FYTTD1 Q96QD9.S118.p_FYTTD1 Q96QD9_S118s _1_1_118_118 Q96QD9 Q96QD9|Q96QD9-2|Q96QD9-3|Q96QD9-4 UAP56-interacting factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16009.16009.3 12.71 8.68 3.787 2 1 1 0 650.6802 1870.0621 S118s TMT10 116 (K) GIsPMNRPPLSDK (N) GIS(0.99)PMNRPPLS(0.0)DK K:TMT10,s:Phosphorylated S FYTTD1 35874.8 7 3 2115.1 96.99 HUMAN 1 -15.0273 -27.1694 TGIRVYYSPPVARRL-p O94964-2;S1255-p TGIRVYYSPPVARRL 0.233167068890665 0.139563779946611 0.208 0.168666666666667 12.1474832535558 11.2685711028957 0.208 0.168666666666667 0.0609890227632623 0.0746694392190119 2.35852161190732 2.20220829375249 O94964 SOGA1 O94964.2.S1255.p_SOGA1 O94964-2_S1255s _1_1_1255_1255 O94964-2 O94964-2|O94964-3 Isoform 2 of Protein SOGA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14463.15020.2 12.24 8.5 5.536 3 1 1 0 680.8468 1280.72 S1255s TMT10 1252 (R) VYYsPPVAR (R) VY(0.0)Y(0.0)S(0.99)PPVAR s:Phosphorylated S SOGA1 185623.3 7 14 215.1 433.51 HUMAN 1 12.1475 11.2686 TGKDVRLSASLPDTV-p Q9HAC8;S164-p TGKDVRLSASLPDTV 0.258161577951988 0.00479967872381982 -0.242666666666667 -0.700333333333333 11.176922765587 33.8753616570891 -0.242666666666667 -0.700333333333333 0.0762619179626666 0.000409697990947524 -2.1871341186263 -7.68923079449764 Q9HAC8 UBTD1 Q9HAC8.S164.p_UBTD1 Q9HAC8_S164s _1_1_164_164 Q9HAC8 Q9HAC8 Ubiquitin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20730.20730.4 14.51 14.51 2.318 3 1 1 0 599.0883 2313.3655 S164s TMT10 160 (K) DVRLsASLPDTVGQLKR (Q) DVRLS(0.99)AS(0.0)LPDT(0.0)VGQLKR K:TMT10,s:Phosphorylated S UBTD1 26166.2 11 2 2220.1 92.94 HUMAN 1 -11.1769 -33.8754 TGKESRKSQSPSPKN-p Q99590;S830-p TGKESRKSQSPSPKN 0.166662576111015 0.0511846070859595 0.546666666666667 -0.370666666666667 15.5569916289136 17.2313445354141 0.546666666666667 -0.370666666666667 0.0278163945065447 0.0189175785729912 2.98358284128788 -3.30577793591403 Q99590 SCAF11 Q99590.S830.p_SCAF11 Q99590_S830sS832s_2_2_830_832 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4200.4200.3 8.72 2.67 6.654 4 2 2 0 678.6654 1874.0496 S830s S832s Hydrogen 829 (R) KsQsPSPKNESAR (G) KS(0.99)QS(0.99)PS(0.0)PKNES(0.0)AR K:TMT10-Lys-Only,s:Phosphorylated S SCAF11 166418 6 33 120.1 549.85 HUMAN 1 15.557 -17.2313 TGKGPPQSPVFEGVY-p Q8WWM7-3;S111-p TGKGPPQSPVFEGVY 0.343120598282226 0.00231858195554507 -0.194 -0.829666666666667 8.63064261450175 40.5742739726665 -0.194 -0.829666666666667 0.137067893528231 8.76138172888979e-05 -1.74442567938142 -10.3927058368261 Q8WWM7 ATXN2L Q8WWM7.3.S111.p_ATXN2L Q8WWM7-3_S111s _1_1_111_111 Q8WWM7-3 Q8WWM7-3|H3BUF6|Q8WWM7-2|Q8WWM7-9|Q8WWM7-4|Q8WWM7-5|Q8WWM7-8|Q8WWM7-6|Q8WWM7-7 Isoform 3 of Ataxin-2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15170.15170.4 18.98 18.98 7.065 5 1 1 0 711.8587 2764.4419 S111s TMT10 101 (R) GQSTGKGPPQsPVFEGVYNNSR (M) GQS(0.0)T(0.0)GKGPPQS(0.99)PVFEGVY(0.0)NNS(0.0)R K:TMT10,s:Phosphorylated S ATXN2L 116093.7 13 5 184.1 476.17 HUMAN 1 -8.6306 -40.5743 TGKLEPVSPPSPPHT-p Q9Y618;S149-p TGKLEPVSPPSPPHT 0.365494152842833 0.372248428057455 0.125166666666667 0.0846666666666667 8.11785875584154 5.69462560189438 0.125166666666667 0.0846666666666667 0.154246075987517 0.269486764242887 1.65559997399991 1.22968794146991 Q9Y618 NCOR2 Q9Y618.S149.p_NCOR2 Q9Y618_S149sS152s_2_2_149_152 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5|C9JE98 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24347.24769.4 21.07 21.07 3.269 5 2 2 0 820.4143 3118.6986 S149s S152s Hydrogen 140 (R) SLTGKLEPVsPPsPPHTDPELELVPPR (L) S(0.0)LT(0.0)GKLEPVS(0.99)PPS(0.99)PPHT(0.0)DPELELVPPR K:TMT10-Lys-Only,s:Phosphorylated S NCOR2 275540.8 25 42 16.1 1053.89 HUMAN 2 8.1179 5.6946 TGKQDGLSPKEISCR-p A1X283;S720-p TGKQDGLSPKEISCR 0.488088514771249 0.315541804704762 -0.184666666666667 -0.152666666666667 5.73629864092211 6.61858585167321 -0.184666666666667 -0.152666666666667 0.266913251544764 0.217841899298651 -1.2374414238171 -1.39370496175284 A1X283 SH3PXD2B A1X283.S720.p_SH3PXD2B A1X283_S720s _1_1_720_720 A1X283 A1X283 SH3 and PX domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8638.8638.3 9.11 4.32 4.08 2 1 1 0 600.007 1718.0415 S720s TMT10 713 (R) TGKQDGLsPK (E) T(0.0)GKQDGLS(0.99)PK K:TMT10,s:Phosphorylated S SH3PXD2B 102033.7 1 4 4051.1 38.55 HUMAN 1 -5.7363 -6.6186 TGKSVACSPKKAVRD-p Q96Q15;S3588-p TGKSVACSPKKAVRD 0.050054490215346 0.00221937322358509 0.800333333333333 -0.889666666666667 28.7407747700574 41.1647501859988 0.800333333333333 -0.889666666666667 0.00133635709265121 7.64759677526511e-05 6.0579640919642 -10.6678612165063 Q96Q15 SMG1 Q96Q15.S3588.p_SMG1 Q96Q15_S3588s _1_1_3588_3588 Q96Q15 Q96Q15|Q96Q15-2|Q96Q15-3|Q96Q15-4 Serine/threonine-protein kinase SMG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6844.6844.2 8.77 8.77 8.772 2 1 1 0 643.833 1206.6917 S3588s TMT10 3584 (K) SVACsPK (K) S(0.0)VACS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SMG1 414601.1 3 9 1337.1 152.31 HUMAN 1 28.7408 -41.1648 TGKTSMPSGDESIDE-p Q03468;S1142-p TGKTSMPSGDESIDE 0.505584947622533 0.0370459736980261 -0.173 0.258666666666667 5.46805855215636 19.2433166746991 -0.173 0.258666666666667 0.283918796085933 0.0119033261264778 -1.18918287683728 3.71509712313911 Q03468 ERCC6 Q03468.S1142.p_ERCC6 Q03468_S1142s _1_1_1142_1142 Q03468 Q03468 DNA excision repair protein ERCC-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13273.13273.3 13.74 10.24 2.222 4 1 1 0 645.3007 1853.9203 S1142s TMT10 1138 (K) TSMPsGDESIDEK (L) T(0.0)S(0.0)MPS(0.99)GDES(0.0)IDEK K:TMT10,s:Phosphorylated S ERCC6 169554.2 2 9 403.1 327.23 HUMAN 1 -5.4681 19.2433 TGKVILASPETSSAK-p P49116;S68-p TGKVILASPETSSAK 0.472747504381845 0.0145497038675128 -0.098 -0.362666666666667 5.99612425930431 25.4506155440655 -0.098 -0.362666666666667 0.251412909546617 0.00285061420917769 -1.28387311771777 -5.15223443131452 P49116 NR2C2 P49116.S68.p_NR2C2 P49116_S68s _1_1_68_68 P49116 P49116-2 Nuclear receptor subfamily 2 group C member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18091.18091.3 12.39 12.39 2.184 4 1 1 0 580.9897 1660.9886 S68s TMT10 64 (K) VILAsPETSSAK (Q) VILAS(0.99)PET(0.0)S(0.0)S(0.0)AK K:TMT10,s:Phosphorylated S NR2C2 66269.1 3 4 993.1 191.1 HUMAN 1 -5.9961 -25.4506 TGLLTIPSPQI____-p Q8TEA7;S890-p TGLLTIPSPQI____ 0.246863210495205 0.0241846702089274 0.179666666666667 0.368 11.6166358690713 22.0285830341235 0.179666666666667 0.368 0.0689185946690938 0.00626818342362488 2.26451517084597 4.32388853950087 Q8TEA7 TBCK Q8TEA7.S890.p_TBCK Q8TEA7_S890s _1_1_890_890 Q8TEA7 Q8TEA7|Q8TEA7-2|Q8TEA7-3 TBC domain-containing protein kinase-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.31195.31407.3 9.84 9.84 4.804 3 1 1 0 672.7357 1936.2247 S890s TMT10 880 (K) IKPTGLLTIPsPQI (-) IKPT(0.0)GLLT(0.0)IPS(0.99)PQI K:TMT10,s:Phosphorylated S TBCK 102046.7 4 1 6745.1 9.84 HUMAN 1 11.6166 22.0286 TGLPPALTPPAPHSL-p Q6P5Z2;T860-p TGLPPALTPPAPHSL 0.803501336800957 0.0640064607445197 -0.0396666666666667 -0.276333333333333 1.8301577648152 15.8922016540019 -0.0396666666666667 -0.276333333333333 0.656121431149384 0.0257501542310238 -0.47085186087242 -3.04538521194848 Q6P5Z2 PKN3 Q6P5Z2.T860.p_PKN3 Q6P5Z2_T860t _1_1_860_860 Q6P5Z2 Q6P5Z2 Serine/threonine-protein kinase N3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31081.31081.3 20.5 20.5 4.726 5 1 1 0 997.8455 2911.5555 T860t TMT10 847 (R) YFEGEFTGLPPALtPPAPHSLLTAR (Q) Y(0.0)FEGEFT(0.0)GLPPALT(0.99)PPAPHS(0.0)LLT(0.0)AR t:Phosphorylated T PKN3 100502.9 1 6 1941.1 106.04 HUMAN 1 -1.8302 -15.8922 TGLQEYKSLQSELDE-p Q16625;S445-p TGLQEYKSLQSELDE 0.205285323000472 0.00369002570624909 -0.499 0.645 13.296997522245 36.114772508033 -0.499 0.645 0.0468058619935505 0.000244637341853255 -2.56472456660752 8.51379627851453 Q16625 OCLN Q16625.S445.p_OCLN Q16625_S445s _1_1_445_445 Q16625 Q16625|A0A0G2JMZ8|Q16625-3|Q16625-2|Q16625-4|Q16625-5 Occludin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22327.22327.3 14.61 10.69 2.948 2 1 1 0 605.317 1733.9686 S445s TMT10 445 (K) sLQSELDEINK (E) S(0.99)LQS(0.0)ELDEINK K:TMT10,s:Phosphorylated S OCLN 59542.1 1 10 840.1 214.78 HUMAN 1 -13.297 36.1148 TGLSARLSNGSFSAP-p O94806;S41-p TGLSARLSNGSFSAP 0.890339985665932 0.834620427596087 0.0243333333333333 -0.029 0.985532478869996 1.10085764723651 0.0243333333333333 -0.029 0.796978768793505 0.776093838037662 0.270245454612054 -0.298959755073853 O94806 PRKD3 O94806.S41.p_PRKD3 O94806_S41s _1_1_41_41 O94806 O94806|O94806-2 Serine/threonine-protein kinase D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18701.18701.2 13.96 5.41 3.274 6 1 1 0 923.946 1766.9234 S41s TMT10 40 (R) LsNGSFSAPSLTNSR (G) LS(0.99)NGS(0.0)FS(0.0)APS(0.0)LT(0.0)NS(0.0)R s:Phosphorylated S PRKD3 101838.2 2 9 1565.1 131.21 HUMAN 1 0.9855 -1.1009 TGLSRSVSCDNVSKV-p Q96CB8;S378-p TGLSRSVSCDNVSKV 0.598927242127729 0.50198024612541 -0.082 -0.112 4.11378345249317 4.00747232971212 -0.082 -0.112 0.387812367457956 0.397422789225095 -0.938817864294411 -0.918401911892074 Q96CB8 INTS12 Q96CB8.S378.p_INTS12 Q96CB8_S378s _1_1_378_378 Q96CB8 Q96CB8|A0A087WXN4 Integrator complex subunit 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8180.8180.2 13.11 6.89 3.05 3 1 1 0 767.3727 1453.7721 S378s TMT10 376 (R) SVsCDNVSK (V) S(0.0)VS(0.99)CDNVS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S INTS12 49263.1 5 2 2764.1 71.37 HUMAN 1 -4.1138 -4.0075 TGLVMTKTKTQRGLM-p Q8TBZ2;T288-p TGLVMTKTKTQRGLM 0.270244427220673 0.146649499058677 -0.195666666666667 0.220333333333333 10.7676032207957 10.9791378058021 -0.195666666666667 0.220333333333333 0.0837991624354383 0.079815312692554 -2.11544335591389 2.15148701029175 Q8TBZ2 MYCBPAP Q8TBZ2.T288.p_MYCBPAP Q8TBZ2_T288tT290t_2_2_288_290 Q8TBZ2 Q8TBZ2 MYCBP-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9775.9775.4 7.2 7.2 7.203 3 2 2 0 547.2701 2010.148 T288t T290t M295m Hydrogen 288 (K) tKtQRGLmEPITHIR (K) T(0.99)KT(0.99)QRGLM(1.0)EPIT(0.0)HIR K:TMT10-Lys-Only,t:Phosphorylated T,m:Oxidized methionine MYCBPAP 108664.2 1 1 7231.1 7.2 HUMAN 1 -10.7676 10.9791 TGMSKSASFAFEFPK-p Q86YV5;S696-p TGMSKSASFAFEFPK 0.552196582768395 0.735891478804877 -0.113666666666667 0.0613333333333334 4.75996371932155 1.83548740154832 -0.113666666666667 0.0613333333333334 0.334197831881396 0.655316736587738 -1.05988080322822 0.472000071418432 Q86YV5 SGK223 Q86YV5.S696.p_SGK223 Q86YV5_S696s _1_1_696_696 Q86YV5 Q86YV5 Tyrosine-protein kinase PRAG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27799.27799.3 14.88 14.88 2.112 2 1 1 0 556.9528 1588.8776 S696s TMT10 694 (K) SAsFAFEFPK (D) S(0.0)AS(0.99)FAFEFPK K:TMT10,s:Phosphorylated S PRAG1 152359.5 4 9 223.1 426.19 HUMAN 1 -4.76 1.8355 TGNFKHASPILPITE-p P42167;S306-p TGNFKHASPILPITE 0.936107507392066 0.201735526904213 0.012 -0.148 0.558834162246127 9.14735090767266 0.012 -0.148 0.879258516882016 0.121692807127911 0.159234867271358 -1.83320183346287 P42167 TMPO P42167.S306.p_TMPO P42167_S306s _1_1_306_306 P42167 P42167|G5E972 Lamina-associated polypeptide 2, isoforms beta/gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.26651.26651.3 21.09 21.09 21.085 3 1 1 0 701.3671 2022.1221 S306s TMT10 304 (K) HAsPILPITEFSDIPR (R) HAS(0.99)PILPIT(0.0)EFS(0.0)DIPR s:Phosphorylated S TMPO 50726.4 8 39 123.2 546.19 HUMAN 1 0.5588 -9.1474 TGNQNQDTQEKKEKR-p Q8NI35;T1184-p TGNQNQDTQEKKEKR 0.513391553452534 0.330134381111663 0.123333333333333 -0.133333333333333 5.34942942396697 6.37310738935568 0.123333333333333 -0.133333333333333 0.29178103307033 0.230509729487567 1.16772483159279 -1.35042790441593 Q8NI35 INADL Q8NI35.T1184.p_INADL Q8NI35_T1184t _1_1_1184_1184 Q8NI35 Q8NI35|Q8NI35-2|Q8NI35-3|Q8NI35-4|Q8NI35-5 InaD-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7637.7637.3 11.4 11.4 2.698 2 1 1 0 757.738 2191.2286 T1184t TMT10 1176 (K) ITGNQNQDtQEKK (E) IT(0.0)GNQNQDT(0.99)QEKK K:TMT10,t:Phosphorylated T PATJ 197163.3 1 16 127.1 542.92 HUMAN 1 5.3494 -6.3731 TGNSITKSPPLMAKR-p Q5VZ89-7;S741-p TGNSITKSPPLMAKR 0.303423649713577 0.00951798723429863 -0.159333333333333 0.487666666666667 9.70381837041449 28.5210147232141 -0.159333333333333 0.487666666666667 0.107057762633511 0.00140571904139383 -1.93029639738699 5.98558138534792 Q5VZ89 DENND4C Q5VZ89.7.S741.p_DENND4C Q5VZ89-7_S741s _1_1_741_741 Q5VZ89-7 Q5VZ89-7|Q5VZ89-3|Q5VZ89-5 Isoform 2 of DENN domain-containing protein 4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15799.15799.2 9.27 3.79 99 1 1 1 0 641.3567 1201.7379 S741s TMT10 741 (K) sPPLMAK (R) S(1.0)PPLMAK K:TMT10,s:Phosphorylated S DENND4C 220154.2 4 3 116.1 565.52 HUMAN 1 -9.7038 28.521 TGPGRCLSPNLQAQE-p Q15735;S385-p TGPGRCLSPNLQAQE 0.512156146242886 0.865460598056603 -0.123333333333333 0.022 5.37221531959961 0.884335726681913 -0.123333333333333 0.022 0.290254170132311 0.815767552977488 -1.17185223870685 0.244584468477102 Q15735 INPP5J Q15735.S385.p_INPP5J Q15735_S385s _1_1_385_385 Q15735 Q15735|B4DF95|Q15735-2 Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27926.27926.5 23.45 23.45 7.402 14 1 1 0 869.0309 4261.1487 S385s TMT10 383 (R) CLsPNLQAQEAPAPVTTSSSTSTLSSSPWSAQPTWK (S) CLS(0.99)PNLQAQEAPAPVT(0.0)T(0.0)S(0.0)S(0.0)S(0.0)T(0.0)S(0.0)T(0.0)LS(0.0)S(0.0)S(0.0)PWS(0.0)AQPT(0.0)WK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S INPP5J 107651.3 2 4 1357.1 150.44 HUMAN 1 -5.3722 0.8843 TGPPPAPSPGLPQPA-p Q04637-9;S15-p TGPPPAPSPGLPQPA 0.880412543483505 0.297482377172579 -0.024 0.11 1.08827567273504 6.95060206732513 -0.024 0.11 0.778345524803534 0.201808657467652 -0.295877191133074 1.45196525680093 Q04637 EIF4G1 Q04637.9.S15.p_EIF4G1 Q04637-9_S15s _1_1_15_15 Q04637-9 Q04637-9|Q04637-8|F8WB97 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28463.28463.5 19.45 19.45 1.331 9 1 1 0 969.0804 4761.4296 S15s TMT10 4 (K) APQSTGPPPAPsPGLPQPAFPPGQTAPVVFSTPQATQMNTPSQPR (Q) APQS(0.0)T(0.0)GPPPAPS(0.99)PGLPQPAFPPGQT(0.0)APVVFS(0.0)T(0.0)PQAT(0.0)QMNT(0.0)PS(0.0)QPR s:Phosphorylated S EIF4G1 176975.4 7 3 107.1 585.61 HUMAN 1 -1.0883 6.9506 TGPTEGYSPPAASTR-p Q969W3-2;S21-p TGPTEGYSPPAASTR 0.125743941781331 0.300149108866295 0.389666666666667 0.122666666666667 18.7330150275783 6.89960576505409 0.389666666666667 0.122666666666667 0.0133874695873127 0.204192329378556 3.61216270350227 1.44303507705664 Q969W3 FAM104A Q969W3.2.S21.p_FAM104A Q969W3-2_S21s _1_1_21_21 Q969W3-2 Q969W3-2|J3KSI9|J3KT76 Isoform 2 of Protein FAM104A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9342.9342.3 25.42 25.42 1.658 8 1 1 0 820.7013 2380.1214 S21s TMT10 5 (R) GADAGSSGGTGPTEGYsPPAASTR (A) GADAGS(0.0)S(0.0)GGT(0.0)GPT(0.0)EGY(0.0)S(0.99)PPAAS(0.0)T(0.0)R s:Phosphorylated S FAM104A 21971.6 2 1 4409.1 31.89 HUMAN 1 18.733 6.8996 TGPVQPGSPHNIGTS-p Q8IZD4;S336-p TGPVQPGSPHNIGTS 0.227780752069412 0.506349379646014 0.207666666666667 0.0733333333333333 12.3538754184472 3.96025826489731 0.207666666666667 0.0733333333333334 0.0581584010776428 0.401766917987885 2.3952641101981 0.909372385004837 Q8IZD4 DCP1B Q8IZD4.S336.p_DCP1B Q8IZD4_S336s _1_1_336_336 Q8IZD4 Q8IZD4|Q8IZD4-2|F5GZK9 mRNA-decapping enzyme 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18004.18004.5 26.16 26.16 4.862 9 1 1 0 999.4833 4913.3499 S336s TMT10 301 (R) SADLHPLSELPENRPCENGSTHSAGEFFTGPVQPGsPHNIGTSR (G) S(0.0)ADLHPLS(0.0)ELPENRPCENGS(0.0)T(0.0)HS(0.0)AGEFFT(0.0)GPVQPGS(0.99)PHNIGT(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S DCP1B 68121.1 2 6 577.1 267.77 HUMAN 1 12.3539 3.9603 TGQAPGYSYTAANKN-p P99999;S48-p TGQAPGYSYTAANKN 0.199032885103621 0.023345939998049 -0.262666666666667 0.713333333333333 13.6461076414618 22.2640236066774 -0.262666666666667 0.713333333333333 0.043190599859162 0.00593741819927621 -2.6281698548098 4.37786605439814 P99999 CYCS P99999.S48.p_CYCS P99999_S48s _1_1_48_48 P99999 P99999 Cytochrome c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11542.11542.2 14.82 11.66 2.269 5 1 1 0 983.9882 1887.0012 S48s TMT10 41 (K) TGQAPGYsYTAANK (N) T(0.0)GQAPGY(0.0)S(0.99)Y(0.0)T(0.0)AANK K:TMT10,s:Phosphorylated S CYCS 11862.6 1 3 4706.1 27.68 HUMAN 1 -13.6461 22.264 TGQDEEWSDEESPRK-p Q9UKS6;S354-p TGQDEEWSDEESPRK 0.499914243414761 0.520159264742113 0.100333333333333 0.066 5.54984109999908 3.81365994260361 0.100333333333333 0.066 0.278622310931146 0.415560256575569 1.20393348793383 0.881194441602434 Q9UKS6 PACSIN3 Q9UKS6.S354.p_PACSIN3 Q9UKS6_S354s _1_1_354_354 Q9UKS6 Q9UKS6 Protein kinase C and casein kinase substrate in neurons protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11779.11981.5 22.09 22.09 2.636 6 1 1 0 716.1303 3496.6505 S354s TMT10 333 (R) DGTAPPPQSPGSPGTGQDEEWsDEESPRK (A) DGT(0.0)APPPQS(0.0)PGS(0.0)PGT(0.0)GQDEEWS(0.99)DEES(0.0)PRK K:TMT10,s:Phosphorylated S PACSIN3 48828.3 17 8 547.1 275.62 HUMAN 1 5.5498 3.8137 TGQKANVSPEQPPLF-p Q5JPF3;S512-p TGQKANVSPEQPPLF 0.857166691692738 0.216370899350747 -0.0266666666666667 0.136333333333333 1.30413608500037 8.7458103182443 -0.0266666666666667 0.136333333333333 0.74060457666062 0.133480851418868 -0.348519115931398 1.7637473951591 Q5JPF3 NotFound Q5JPF3.S512.p_NotFound Q5JPF3_S512s _1_1_512_512 Q5JPF3 A6QL64|Q5JPF3 Ankyrin repeat domain-containing protein 36C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18693.18693.3 18.34 18.34 9.085 3 1 1 0 768.4138 2223.2538 S512s TMT10 509 (K) ANVsPEQPPLFTHTVK (D) ANVS(0.99)PEQPPLFT(0.0)HT(0.0)VK K:TMT10,s:Phosphorylated S ANKRD36C 201513.2 1 1 4477.1 30.91 HUMAN 1 -1.3041 8.7458 TGQTPVFSKARYTVR-p P62913;S51-p TGQTPVFSKARYTVR 0.827264797305235 0.897116264488935 -0.0306666666666667 0.028 1.58427071466409 0.660750861848334 -0.0306666666666667 0.028 0.694341188581858 0.85886501749423 -0.414632209603369 0.186455990361051 P62913 RPL11 P62913.S51.p_RPL11 P62913_S51s _1_1_51_51 P62913 P62913|P62913-2 60S ribosomal protein L11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27727.27727.3 12.87 12.87 2.403 3 1 1 0 695.7189 2005.1734 S51s TMT10 39 (K) VLEQLTGQTPVFsK (A) VLEQLT(0.0)GQT(0.0)PVFS(0.99)K K:TMT10,s:Phosphorylated S RPL11 20480.2 1 3 3548.1 48.49 HUMAN 1 -1.5843 0.6608 TGQTTQVSPPVIAGR-p Q6MZP7;S264-p TGQTTQVSPPVIAGR 0.689385882760621 0.173251703388099 0.054 0.199 3.03052083519942 10.0104079152376 0.054 0.199 0.497677396573835 0.0997606358292482 0.726604635033625 1.9827159939922 Q6MZP7 LIN54 Q6MZP7.S264.p_LIN54 Q6MZP7_S264s _1_1_264_264 Q6MZP7 Q6MZP7|Q6MZP7-3 Protein lin-54 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15542.15542.2 17.07 17.07 2.214 4 1 1 0 996.0348 1911.0861 S264s TMT10 255 (K) AVTGQTTQVsPPVIAGR (V) AVT(0.0)GQT(0.0)T(0.0)QVS(0.99)PPVIAGR s:Phosphorylated S LIN54 80862.1 3 3 2171.1 94.63 HUMAN 1 3.0305 10.0104 TGQVYYNTDDEREGG-p Q6ISB3;T500-p TGQVYYNTDDEREGG 0.38707572980181 0.273024215413764 0.142333333333333 -0.130333333333333 7.62631688232322 7.42673313386376 0.142333333333333 -0.130333333333333 0.172730214273134 0.180853403668104 1.57026111473724 -1.53507265644236 Q6ISB3 GRHL2 Q6ISB3.T500.p_GRHL2 Q6ISB3_T500t _1_1_500_500 Q6ISB3 Q6ISB3|Q6ISB3-2 Grainyhead-like protein 2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15785.15785.3 21.11 17.64 6.883 5 1 1 0 923.4579 2688.3881 T500t TMT10 493 (R) TGQVYYNtDDEREGGSVLVK (R) T(0.0)GQVY(0.0)Y(0.0)NT(0.99)DDEREGGS(0.0)VLVK K:TMT10,t:Phosphorylated T GRHL2 71446.2 3 11 651.1 254.16 HUMAN 1 7.6263 -7.4267 TGRDPLDSEEEATGA-p O43822-4;S177-p TGRDPLDSEEEATGA 0.496460521143935 0.240860632253843 -0.116666666666667 0.173 5.6008637741953 8.14562389971321 -0.116666666666667 0.173 0.275368096552148 0.153263101550679 -1.21311922291077 1.65987717478489 O43822 C21orf2 O43822.4.S177.p_C21orf2 O43822-4_S177s _1_1_177_177 O43822-4 O43822-4|O43822-3 Isoform 4 of Protein C21orf2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23759.23759.4 19.42 19.42 4.406 8 1 1 0 941.9175 3684.6802 S177s TMT10 157 (K) LCCTLSSLSSAAETGRDPLDsEEEATGAQDER (G) LCCT(0.0)LS(0.0)S(0.0)LS(0.0)S(0.0)AAET(0.0)GRDPLDS(0.99)EEEAT(0.0)GAQDER C:Carbamidomethylation,s:Phosphorylated S C21orf2 41276.9 2 4 3852.2 41.68 HUMAN 1 -5.6009 8.1456 TGRDPLDSEEEATSG-p O43822;S177-p TGRDPLDSEEEATSG 0.490171143915093 0.61681079314915 0.195 0.05 5.70889376647291 2.85253863697331 0.195 0.05 0.268602854286695 0.518496866736847 1.23252680779651 0.690204539150427 O43822 C21orf2 O43822.S177.p_C21orf2 O43822_S177s _1_1_177_177 O43822 O43822|O43822-2 Protein C21orf2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23678.23678.4 19.61 19.61 4.316 9 1 1 0 963.6756 3771.7123 S177s TMT10 157 (K) LCCTLSSLSSAAETGRDPLDsEEEATSGAQDER (G) LCCT(0.0)LS(0.0)S(0.0)LS(0.0)S(0.0)AAET(0.0)GRDPLDS(0.99)EEEAT(0.0)S(0.0)GAQDER C:Carbamidomethylation,s:Phosphorylated S C21orf2 28739.2 1 3 3852.1 41.68 HUMAN 1 5.7089 2.8525 TGRRRRRSGEQITSS-p A0A087WZV0;S1021-p TGRRRRRSGEQITSS 0.0688727140958235 0.00851975429364361 0.379 0.475 25.0491796698906 29.3695782854414 0.379 0.475 0.003126669901737 0.00115622451003254 5.05624326895101 6.23297863213913 A0A087WZV0 PPIP5K2 A0A087WZV0.S1021.p_PPIP5K2 A0A087WZV0_S1021s _1_1_1021_1021 A0A087WZV0 A0A087WZV0|O43314|O43314-2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12820.12820.2 17.76 13.88 7.105 5 1 1 0 927.9848 1774.9951 S1021s TMT10 1021 (R) sGEQITSSPVSPK (S) S(0.99)GEQIT(0.0)S(0.0)S(0.0)PVS(0.0)PK K:TMT10,s:Phosphorylated S PPIP5K2 145671.7 12 5 778.1 226.58 HUMAN 1 25.0492 29.3696 TGRRVMDSPERPVVN-p Q8N0Z3;S477-p TGRRVMDSPERPVVN 0.726174334084308 0.0532497497470672 0.0476666666666667 -0.244 2.63584714906498 16.9877847329055 0.0476666666666667 -0.244 0.5450235712333 0.0200088222758446 0.645425928715303 -3.25774914774233 Q8N0Z3 SPICE1 Q8N0Z3.S477.p_SPICE1 Q8N0Z3_S477s _1_1_477_477 Q8N0Z3 Q8N0Z3 Spindle and centriole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.32939.32939.5 25.47 20.69 5.782 2 1 1 0 904.8678 4440.3348 S477s TMT10 474 (R) VMDsPERPVVNANVSVPLMFREEVAEFPQEELPVK (L) VMDS(0.99)PERPVVNANVS(0.0)VPLMFREEVAEFPQEELPVK K:TMT10,s:Phosphorylated S SPICE1 96605.1 10 5 556.1 273.19 HUMAN 1 2.6358 -16.9878 TGRSLVGSWLKLNRA-p Q6ICG6-2;S367-p TGRSLVGSWLKLNRA 0.146592070323056 0.604897225668948 0.295333333333333 0.11 16.9774762802055 2.96247142032401 0.295333333333333 0.11 0.0200563718051851 0.505536896495227 3.25819987741731 0.712680148714915 Q6ICG6 KIAA0930 Q6ICG6.2.S367.p_KIAA0930 Q6ICG6-2_S367s _1_1_367_367 Q6ICG6-2 Q6ICG6-2|Q6ICG6-3 Isoform 2 of Uncharacterized protein KIAA0930 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26932.26932.2 12.47 1.89 4.609 2 1 1 0 714.4061 1347.84 S367s TMT10 363 (R) SLVGsWLK (L) S(0.0)LVGS(0.99)WLK K:TMT10,s:Phosphorylated S KIAA0930 46582.9 3 5 1552.1 132.36 HUMAN 1 16.9775 2.9625 TGSAPPPSPTPNKEM-p Q9UBW7;S838-p TGSAPPPSPTPNKEM 0.326502819643871 0.0104649471452645 -0.153333333333333 -0.447 9.09915875713259 27.7836721871317 -0.153333333333333 -0.447 0.123050710105031 0.00166583806361633 -1.82552923566178 -5.77685677497039 Q9UBW7 ZMYM2 Q9UBW7.S838.p_ZMYM2 Q9UBW7_S838s _1_1_838_838 Q9UBW7 Q9UBW7 Zinc finger MYM-type protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10448.10664.3 17.62 17.62 2.145 4 1 1 0 640.6618 1840.0039 S838s TMT10 830 (K) MTGSAPPPsPTPNK (E) MT(0.0)GS(0.0)APPPS(0.99)PT(0.0)PNK K:TMT10,s:Phosphorylated S ZMYM2 158502.5 10 6 750.1 232.41 HUMAN 1 -9.0992 -27.7837 TGSEPALSPAVVRRV-p O75815;S375-p TGSEPALSPAVVRRV 0.3728639655768 0.187178585400915 0.139666666666667 0.165666666666667 7.94809664023067 9.5719969995412 0.139666666666667 0.165666666666667 0.160394819067852 0.110357105240021 1.62615544469327 1.90670359109104 O75815 BCAR3 O75815.S375.p_BCAR3 O75815_S375s _1_1_375_375 O75815 O75815|O75815-3|O75815-2 Breast cancer anti-estrogen resistance protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14473.14473.3 14.72 14.72 6.563 3 1 1 0 531.6138 1512.8583 S375s TMT10 368 (R) TGSEPALsPAVVR (R) T(0.0)GS(0.0)EPALS(0.99)PAVVR s:Phosphorylated S BCAR3 93533.8 4 12 401.1 327.42 HUMAN 1 7.9481 9.572 TGSKASASPSTSSTS-p J3KP75;S225-p TGSKASASPSTSSTS 0.0520154613962689 0.0149918966091793 0.433333333333333 0.352666666666667 27.9861199270277 25.246281911901 0.433333333333333 0.352666666666667 0.00158996662192274 0.00298793956330549 5.84203925579873 5.09997676715084 J3KP75 NotFound J3KP75.S225.p_NotFound J3KP75_S225s _1_1_225_225 J3KP75 O75167-4|J3KP75|O75167-2|O75167-5 Phosphatase and actin regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4081.4081.2 15.03 10.27 1.777 9 1 1 0 995.0045 1909.0391 S225s TMT10 222 (K) ASAsPSTSSTSSRPK (A) AS(0.0)AS(0.99)PS(0.0)T(0.0)S(0.0)S(0.0)T(0.0)S(0.0)S(0.0)RPK K:TMT10,s:Phosphorylated S PHACTR2 68408.7 4 5 2025.1 101.72 HUMAN 1 27.9861 25.2463 TGSLFGFSFNAPLKS-p P49792;S2548-p TGSLFGFSFNAPLKS 0.277218013714298 0.0376248888590737 -0.242666666666667 -0.468 10.5408000998596 19.1383452883523 -0.242666666666667 -0.468 0.0882917225769488 0.0121945413639546 -2.07584288039507 -3.6931540702701 P49792 RANBP2 P49792.S2548.p_RANBP2 P49792_S2548s _1_1_2548_2548 P49792 P49792|O14715|J3KNE0|A6NKT7|J3KQ37 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34540.34540.4 23.14 18.7 5.717 6 1 1 0 837.441 3266.7817 S2548s TMT10 2530 (K) SKPFAFGNSSATGSLFGFsFNAPLK (S) S(0.0)KPFAFGNS(0.0)S(0.0)AT(0.0)GS(0.0)LFGFS(0.99)FNAPLK K:TMT10,s:Phosphorylated S RANBP2 362585.9 1 56 9.1 1298.62 HUMAN 1 -10.5408 -19.1383 TGSRFRNSVEGLNQE-p Q6P1L5;S345-p TGSRFRNSVEGLNQE 0.0584327871562607 0.0164163361695076 -0.616666666666667 0.371333333333333 26.9362178879758 24.6458275214537 -0.616666666666667 0.371333333333333 0.00202478171954848 0.00343097258492933 -5.55147549064707 4.94856875520262 Q6P1L5 FAM117B Q6P1L5.S345.p_FAM117B Q6P1L5_S345s _1_1_345_345 Q6P1L5 Q6P1L5 Protein FAM117B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30018.30018.4 18.63 16.5 99 1 1 1 0 635.8515 2460.4226 S345s TMT10 342 (R) FRNsVEGLNQEIEIIIK (E) FRNS(1.0)VEGLNQEIEIIIK K:TMT10,s:Phosphorylated S FAM117B 62537.3 1 9 492.1 293.79 HUMAN 1 -26.9362 24.6458 TGSSGVISPQELLKK-p Q8IZD4;S448-p TGSSGVISPQELLKK 0.223329192805893 0.562811471248144 0.216333333333333 0.068 12.5139655627297 3.36347662658231 0.216333333333333 0.068 0.0560535914384169 0.460948427074097 2.42384375835107 0.793199893760583 Q8IZD4 DCP1B Q8IZD4.S448.p_DCP1B Q8IZD4_S448s _1_1_448_448 Q8IZD4 Q8IZD4|Q8IZD4-2|F5GZK9 mRNA-decapping enzyme 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28467.28669.3 22.47 20.73 1.106 7 1 1 0 955.8497 2785.5711 S448s TMT10 432 (R) QTLPISGSQTGSSGVIsPQELLK (K) QT(0.0)LPIS(0.0)GS(0.0)QT(0.0)GS(0.0)S(0.0)GVIS(0.99)PQELLK K:TMT10,s:Phosphorylated S DCP1B 68121.1 7 8 577.1 267.77 HUMAN 1 12.514 3.3635 TGSTLQQSLELKRKM-p Q9BSJ2-4;S153-p TGSTLQQSLELKRKM 0.21078151909367 0.0714251631959645 0.189333333333333 0.201333333333333 13.052165113839 15.2361419882535 0.189333333333333 0.201333333333333 0.0495203252664307 0.029949239660956 2.52047106007457 2.92091531553077 Q9BSJ2 TUBGCP2 Q9BSJ2.4.S153.p_TUBGCP2 Q9BSJ2-4_S153s _1_1_153_153 Q9BSJ2-4 Q9BSJ2-4|Q9BSJ2-3|F2Z2B9 Isoform 3 of Gamma-tubulin complex component 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22587.22587.3 18.29 16.54 2.284 5 1 1 0 800.1063 2318.3331 S153s TMT10 140 (K) QLGSVATGSTLQQsLELK (R) QLGS(0.0)VAT(0.0)GS(0.0)T(0.0)LQQS(0.99)LELK K:TMT10,s:Phosphorylated S TUBGCP2 106367.6 1 2 4348.1 33.04 HUMAN 1 13.0522 15.2361 TGTGKKCSLPAEEDS-p E7EVA0;S653-p TGTGKKCSLPAEEDS 0.317293780834702 0.936575483423398 -0.221 0.00800000000000001 9.33722872407095 0.401882130382555 -0.221 0.00800000000000001 0.116486910677041 0.911615680889766 -1.86675605572329 0.11628060521104 E7EVA0 NotFound E7EVA0.S653.p_NotFound E7EVA0_S653s _1_1_653_653 E7EVA0 E7EVA0|P27816|P27816-6 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17115.17115.4 15.73 15.73 3.016 2 1 1 0 593.8148 2292.2724 S653s TMT10 651 (K) KCsLPAEEDSVLEK (L) KCS(0.99)LPAEEDS(0.0)VLEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MAP4 246695.2 5 18 38.1 865.62 HUMAN 1 -9.3372 0.4019 TGTLSRLSLDEDEEP-p O60241;S1275-p TGTLSRLSLDEDEEP 0.177952626351024 0.386668326776836 -0.384 -0.101333333333333 14.8341189121622 5.48551189285125 -0.384 -0.101333333333333 0.0328539891049111 0.282780078507193 -2.847397549171 -1.19207245495983 O60241 ADGRB2 O60241.S1275.p_ADGRB2 O60241_S1275s _1_1_1275_1275 O60241 O60241|O60241-2|O60241-3|A2A3C2|O60241-4|A2A3C6|A2A3C3|A2A3C1 Adhesion G protein-coupled receptor B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22774.22774.3 18.27 14.2 1.191 7 1 1 0 1148.5665 3363.699 S1275s TMT10 1258 (K) EVNTCNPSTITGTLSRLsLDEDEEPK (S) EVNT(0.0)CNPS(0.0)T(0.0)IT(0.0)GT(0.0)LS(0.0)RLS(0.99)LDEDEEPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ADGRB2 176361.4 1 2 5007.1 23.96 HUMAN 1 -14.8341 -5.4855 TGTPSPMSPNPSPAS-p P51826-2;S1146-p TGTPSPMSPNPSPAS 0.903824421294789 0.0910630018690853 0.0196666666666667 0.24 0.863888246990931 13.764784445604 0.0196666666666667 0.24 0.819617410672326 0.0420263386190615 0.239378879494278 2.64827681112834 P51826 AFF3 P51826.2.S1146.p_AFF3 P51826-2_S1146s _1_1_1146_1146 P51826-2 P51826-2 Isoform 2 of AF4/FMR2 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26491.26491.4 20.17 20.17 2.226 16 1 1 0 1062.7757 4168.1029 S1146s TMT10 1138 (K) STGTPSPMsPNPSPASSVGSQGSLSNASALSPSTIVSIPQR (I) S(0.0)T(0.0)GT(0.0)PS(0.0)PMS(0.99)PNPS(0.0)PAS(0.0)S(0.0)VGS(0.0)QGS(0.0)LS(0.0)NAS(0.0)ALS(0.0)PS(0.0)T(0.0)IVS(0.0)IPQR s:Phosphorylated S AFF3 137490.8 6 7 632.2 256.73 HUMAN 1 0.8639 13.7648 TGTTVPESIHSFIGD-p P42345;S2478-p TGTTVPESIHSFIGD 0.84768925371821 0.149825758574449 -0.0293333333333333 0.195333333333333 1.3890814067509 10.8480564975139 -0.0293333333333334 0.195333333333333 0.726259555190335 0.0822610692443589 -0.368816127461726 2.12856646474926 P42345 MTOR P42345.S2478.p_MTOR P42345_S2478s _1_1_2478_2478 P42345 P42345|B1AKP8 Serine/threonine-protein kinase mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23631.23631.5 16.83 16.83 2.932 5 1 1 0 747.8241 3655.1241 S2478s TMT10 2471 (K) TGTTVPEsIHSFIGDGLVKPEALNKK (A) T(0.0)GT(0.0)T(0.0)VPES(0.99)IHS(0.0)FIGDGLVKPEALNKK K:TMT10,s:Phosphorylated S MTOR 290940.5 5 6 571.1 269.24 HUMAN 1 -1.3891 10.8481 TGTYHGDSDLQLDRI-p P07437;S40-p TGTYHGDSDLQLDRI 0.883932229691516 0.0330576536509783 0.022 -0.360333333333333 1.05740456068816 19.9647821155541 0.022 -0.360333333333334 0.783897977475556 0.0100814218633472 0.28821641418154 -3.86778519253517 P07437 TUBB P07437.S40.p_TUBB P07437_S40s _1_1_40_40 P07437 P07437 Tubulin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26956.26956.4 23.58 23.58 2.187 5 1 1 0 853.6395 3331.5705 S40s TMT10 20 (K) FWEVISDEHGIDPTGTYHGDsDLQLDR (I) FWEVIS(0.0)DEHGIDPT(0.0)GT(0.0)Y(0.0)HGDS(0.99)DLQLDR s:Phosphorylated S TUBB 50126.4 1 3 333.1 357.15 HUMAN 1 1.0574 -19.9648 TGTYHGDSDLQLERI-p P68371;S40-p TGTYHGDSDLQLERI 0.102728705875057 0.873724348410556 0.333666666666667 -0.0273333333333333 20.8901473807537 0.825517006908991 0.333666666666667 -0.0273333333333333 0.00814676636952073 0.826891065262993 4.07264357613945 -0.229497624801032 P68371 TUBB4B P68371.S40.p_TUBB4B P68371_S40s _1_1_40_40 P68371 P68371|P04350|M0QX14|M0QY37|M0R0X0 Tubulin beta-4B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26924.26924.4 20.39 20.39 1.112 5 1 1 0 857.1398 3345.5861 S40s TMT10 20 (K) FWEVISDEHGIDPTGTYHGDsDLQLER (I) FWEVIS(0.0)DEHGIDPT(0.0)GT(0.0)Y(0.0)HGDS(0.99)DLQLER s:Phosphorylated S TUBB4B 50286.6 1 21 333.2 357.15 HUMAN 1 20.8901 -0.8255 TGVCVQQSPVASS__-p Q13627;S758-p TGVCVQQSPVASS__ 0.188778224113783 0.677846377479218 0.274 -0.104333333333333 14.1947323944998 2.30725752849019 0.274 -0.104333333333333 0.0380650811989157 0.587860455938982 2.72874224312692 -0.575749474637152 Q13627 DYRK1A Q13627.S758.p_DYRK1A Q13627_S758s _1_1_758_758 Q13627 Q13627 Dual specificity tyrosine-phosphorylation-regulated kinase 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13237.13237.3 14.57 14.57 1.667 5 1 1 0 910.4066 2649.2446 S758s TMT10 741 (R) QGADREESPMTGVCVQQsPVASS (-) QGADREES(0.0)PMT(0.0)GVCVQQS(0.99)PVAS(0.0)S(0.0) C:Carbamidomethylation,s:Phosphorylated S DYRK1A 86095.8 1 5 2424.1 84.13 HUMAN 1 14.1947 -2.3073 TGVEDKESWHGKPLP-p P29401-2;S264-p TGVEDKESWHGKPLP 0.123776415797331 0.123652029356351 0.347666666666667 0.184333333333333 18.8687387190331 11.9761078429078 0.347666666666667 0.184333333333333 0.0129755605337379 0.0634438041375055 3.64026534438213 2.32693917757751 P29401 TKT P29401.2.S264.p_TKT P29401-2_S264s _1_1_264_264 P29401-2 P29401-2|A0A0B4J1R6|E9PFF2 Isoform 2 of Transketolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16099.16099.5 15.09 15.09 3.876 2 1 1 0 595.7395 2894.691 S264s TMT10 255 (R) GITGVEDKEsWHGKPLPK (N) GIT(0.0)GVEDKES(0.99)WHGKPLPK K:TMT10,s:Phosphorylated S TKT 69497 1 3 1447.1 140.91 HUMAN 1 18.8687 11.9761 TGVLGPHSPPAQPTP-p F2Z2W7;S620-p TGVLGPHSPPAQPTP 0.822004837548017 0.431019149399842 0.0356666666666667 0.095 1.63839428372017 4.87027638680468 0.0356666666666667 0.095 0.685741718761807 0.325815965279401 0.427144426003139 1.08001758199935 F2Z2W7 TRMT2A F2Z2W7.S620.p_TRMT2A F2Z2W7_S620s _1_1_620_620 F2Z2W7 F2Z2W7|Q8IZ69 tRNA (uracil-5-)-methyltransferase homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19054.19054.5 22.52 22.52 5.145 8 1 1 0 806.1868 3946.9409 S620s TMT10 607 (R) VEHPNGTGVLGPHsPPAQPTPGPPDNTLQETGTFPSS (-) VEHPNGT(0.0)GVLGPHS(0.99)PPAQPT(0.0)PGPPDNT(0.0)LQET(0.0)GT(0.0)FPS(0.0)S(0.0) s:Phosphorylated S TRMT2A 71860.7 10 1 5138.1 22.52 HUMAN 1 1.6384 4.8703 TGVPSTASVGKSKTP-p P28290;S1134-p TGVPSTASVGKSKTP 0.0768338580443976 0.0239685124018376 0.382333333333333 0.304666666666667 23.8532141141564 22.0891312074598 0.382333333333333 0.304666666666667 0.00411792647974302 0.00618140044755036 4.75907256082402 4.33773015462708 P28290 SSFA2 P28290.S1134.p_SSFA2 P28290_S1134s _1_1_1134_1134 P28290 P28290 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11569.11569.3 12.13 8.44 1.35 4 1 1 0 514.6169 1461.8677 S1134s TMT10 1127 (R) TGVPSTAsVGK (S) T(0.0)GVPS(0.0)T(0.0)AS(0.99)VGK K:TMT10,s:Phosphorylated S SSFA2 139638.7 1 29 73.1 652.35 HUMAN 1 23.8532 22.0891 TGVVAKLSPANQRKC-p Q13263;S697-p TGVVAKLSPANQRKC 0.283283360364086 0.0304337131062119 0.151333333333333 0.471666666666667 10.3479485435716 20.5030189307521 0.151333333333333 0.471666666666667 0.0923007320825308 0.00890631614144918 2.04223119583649 3.9838967896255 Q13263 TRIM28 Q13263.S697.p_TRIM28 Q13263_S697s _1_1_697_697 Q13263 Q13263|Q13263-2 Transcription intermediary factor 1-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20208.20208.3 17.95 17.95 1.259 5 1 1 0 1052.1958 3074.6006 S697s TMT10 677 (K) EEDGSLSLDGADSTGVVAKLsPANQR (K) EEDGS(0.0)LS(0.0)LDGADS(0.0)T(0.0)GVVAKLS(0.99)PANQR K:TMT10,s:Phosphorylated S TRIM28 90316.8 3 20 118.1 555.36 HUMAN 1 10.3479 20.503 TGWDTSESELSEGEL-p F8VU11;S870-p TGWDTSESELSEGEL 0.662794592000247 0.0571110553337939 0.0601666666666667 0.300166666666667 3.34360263002445 16.5674842045197 0.0601666666666667 0.300166666666667 0.463062633142649 0.0220420295129054 0.7893781180645 3.17558269215416 F8VU11 PRPF40B F8VU11.S870.p_PRPF40B F8VU11_S870sS873s_2_2_870_873 F8VU11 F8VU11|Q6NWY9|Q6NWY9-3|Q6NWY9-2 PRP40 pre-mRNA processing factor 40 homolog B (Yeast), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21239.21239.3 11.58 11.58 2.374 5 2 2 0 771.985 2154.0036 S870s S873s TMT10 863 (K) TGWDTSEsELsEGELER (R) T(0.0)GWDT(0.0)S(0.0)ES(0.99)ELS(0.99)EGELER s:Phosphorylated S PRPF40B 101691.8 2 6 1236.1 163.46 HUMAN 2 3.3436 16.5675 TGYDRKDYV______-p O15551;Y219-p TGYDRKDYV______ 0.254275357632195 0.380302219265518 0.169666666666667 0.102666666666667 11.3184877765806 5.58065409359271 0.169666666666667 0.102666666666667 0.0738161214825536 0.276652494600743 2.21200263363515 1.20921324343798 O15551 CLDN3 O15551.Y219.p_CLDN3 O15551_Y219y _1_1_219_219 O15551 O15551 Claudin-3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.15581.15771.3 20.14 18.23 8.01 6 1 1 0 794.7303 2302.2079 Y219y TMT10 203 (R) STGPGASLGTGYDRKDyV (-) S(0.0)T(0.0)GPGAS(0.0)LGT(0.0)GY(0.0)DRKDY(0.99)V K:TMT10,y:Phosphorylated Y CLDN3 23831.6 2 3 36.1 53.77 HUMAN 1 11.3185 5.5807 THALKHVSDDMKTHK-p Q01518;S275-p THALKHVSDDMKTHK 0.867926872473441 0.309805013150574 -0.0303333333333333 -0.137 1.19922071516408 6.72452938335851 -0.0303333333333333 -0.137 0.758713704099619 0.212592070491482 -0.323130427320102 -1.41232711879717 Q01518 CAP1 Q01518.S275.p_CAP1 Q01518_S275s _1_1_275_275 Q01518 Q01518|Q01518-2 Adenylyl cyclase-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7273.7273.3 7.53 7.53 99 1 1 1 0 457.2243 1289.6924 S275s TMT10 273 (K) HVsDDMK (T) HVS(1.0)DDMK K:TMT10,s:Phosphorylated S CAP1 52357 1 3 1493.1 137.01 HUMAN 1 -1.1992 -6.7245 THAPSALSPPRKRGK-p O15417;S1540-p THAPSALSPPRKRGK 0.149024470822507 0.228195750948376 0.289333333333333 -0.136 16.6761230251908 8.45266944184371 0.289333333333333 -0.136 0.0214974871231156 0.142801594199123 3.19911380689306 -1.71303485803853 O15417 TNRC18 O15417.S1540.p_TNRC18 O15417_S1540s _1_1_1540_1540 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7402.7617.3 11.99 11.99 1.837 3 1 1 0 481.5835 1362.7691 S1540s TMT10 1533 (R) THAPSALsPPR (K) T(0.0)HAPS(0.0)ALS(0.99)PPR s:Phosphorylated S TNRC18 316168 3 12 75.1 647.68 HUMAN 1 16.6761 -8.4527 THCSRHGSGPNIILT-p Q53ET0;S613-p THCSRHGSGPNIILT 0.33341548273698 0.535246453315961 0.173333333333333 0.0613333333333334 8.90506530103145 3.65209253731981 0.173333333333333 0.0613333333333334 0.128674790519067 0.431311210435597 1.79192921410699 0.849878799447992 Q53ET0 CRTC2 Q53ET0.S613.p_CRTC2 Q53ET0_S613s _1_1_613_613 Q53ET0 Q53ET0|Q5T4K5 CREB-regulated transcription coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19127.19127.3 21.66 21.48 11.553 5 1 1 0 803.7455 2329.2552 S613s TMT10 611 (R) HGsGPNIILTGDSSPGFSK (E) HGS(0.99)GPNIILT(0.0)GDS(0.0)S(0.0)PGFS(0.0)K K:TMT10,s:Phosphorylated S CRTC2 73528.7 2 8 1040.1 185.06 HUMAN 1 8.9051 3.6521 THDGSRASPGANRTM-p Q96LL9;S154-p THDGSRASPGANRTM 0.536999686617219 0.122511316328922 0.0893333333333333 -0.230333333333333 4.99575433862702 12.0261907272901 0.0893333333333334 -0.230333333333333 0.316537061331842 0.0627163719739512 1.1032800040115 -2.3358124743961 Q96LL9 DNAJC30 Q96LL9.S154.p_DNAJC30 Q96LL9_S154s _1_1_154_154 Q96LL9 Q96LL9 DnaJ homolog subfamily C member 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.2908.2908.3 11.29 10.02 2.22 3 1 1 0 545.5911 1554.7934 S154s TMT10 147 (R) THDGSRAsPGANR (T) T(0.0)HDGS(0.0)RAS(0.99)PGANR s:Phosphorylated S DNAJC30 26075 2 6 2713.1 73.01 HUMAN 1 4.9958 -12.0262 THDTKDQSPSRAPGL-p P09601;S229-p THDTKDQSPSRAPGL 0.320451025769791 0.178329844121827 -0.428666666666667 -0.167 9.25101166867682 9.85124293358701 -0.428666666666667 -0.167 0.118822540364728 0.103484595548494 -1.85182326792375 -1.95510008692717 P09601 HMOX1 P09601.S229.p_HMOX1 P09601_S229s _1_1_229_229 P09601 P09601 Heme oxygenase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5242.5242.3 10.55 10.55 2.431 2 1 1 0 498.2543 1412.7807 S229s TMT10 227 (K) DQsPSRAPGLR (Q) DQS(0.99)PS(0.0)RAPGLR s:Phosphorylated S HMOX1 32818 1 1 6615.1 10.55 HUMAN 1 -9.251 -9.8512 THELPPYTPPPMLSP-p Q96PN7;T709-p THELPPYTPPPMLSP 0.527344543785721 0.0880711277214935 0.115333333333333 0.243666666666667 5.1411779893767 13.967657408184 0.115333333333333 0.243666666666667 0.306113301299423 0.0401083004143453 1.12986788323569 2.68537586240572 Q96PN7 TRERF1 Q96PN7.T709.p_TRERF1 Q96PN7_T709tS715s_2_2_709_715 Q96PN7 Q05GC8|Q96PN7|Q96PN7-5|Q96PN7-4 Transcriptional-regulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32426.32426.4 13.41 13.41 1.438 4 2 2 0 849.1799 3233.7594 T709t S715s TMT10 692 (R) VLGDHLLLDPTHELPPYtPPPMLsPVR (Q) VLGDHLLLDPT(0.0)HELPPY(0.0)T(0.99)PPPMLS(0.99)PVR t:Phosphorylated T,s:Phosphorylated S TRERF1 132995.3 1 10 1115.1 175.65 HUMAN 1 5.1412 13.9677 THFELEPSPPSGLGF-p O95049-3;S508-p THFELEPSPPSGLGF 0.860894111325596 0.0775282848153013 0.0366666666666667 -0.245333333333333 1.27164280729042 14.73488146955 0.0366666666666667 -0.245333333333333 0.746166452368544 0.0336133542895233 0.34069457183286 -2.82706936788799 O95049 TJP3 O95049.3.S508.p_TJP3 O95049-3_S508s _1_1_508_508 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22314.22314.3 19.14 19.14 7.055 4 1 1 0 727.6905 2101.0916 S508s TMT10 501 (R) THFELEPsPPSGLGFTR (G) T(0.0)HFELEPS(0.99)PPS(0.0)GLGFT(0.0)R s:Phosphorylated S TJP3 103593.6 3 12 125.1 544.41 HUMAN 1 1.2716 -14.7349 THHLHSSSDDEDDRL-p Q9UPN7;S531-p THHLHSSSDDEDDRL 0.732651492896551 0.0652241331926333 0.0646666666666667 0.290666666666667 2.55773366401058 15.7754553778286 0.0646666666666667 0.290666666666667 0.554915216116138 0.0264517532132927 0.629056826632145 3.02309406122307 Q9UPN7 PPP6R1 Q9UPN7.S531.p_PPP6R1 Q9UPN7_S529sS530sS531s_3_3_529_531 Q9UPN7 Q9UPN7 Serine/threonine-protein phosphatase 6 regulatory subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16579.16579.4 13.27 13.27 13.267 4 3 3 0 844.6204 3135.5529 S529s S530s S531s TMT10 517 (K) NMVDLVNTHHLHsssDDEDDRLK (E) NMVDLVNT(0.0)HHLHS(0.99)S(0.99)S(0.99)DDEDDRLK K:TMT10,s:Phosphorylated S PPP6R1 97349.5 4 8 1319.1 154.5 HUMAN 1 2.5577 15.7755 THLAGALSPGEAWPF-p Q9Y3X0;S521-p THLAGALSPGEAWPF 0.753442644064781 0.727816360475748 0.0486666666666667 -0.0343333333333333 2.34787515753723 1.8994705402314 0.0486666666666666 -0.0343333333333333 0.582388089054069 0.6457329472297 0.584534003777552 -0.486366712406787 Q9Y3X0 CCDC9 Q9Y3X0.S521.p_CCDC9 Q9Y3X0_S521s _1_1_521_521 Q9Y3X0 Q9Y3X0 Coiled-coil domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31220.31220.3 21.62 21.62 4.448 4 1 1 0 760.3694 2199.1284 S521s TMT10 513 (R) TTHLAGALsPGEAWPFESV (-) T(0.0)T(0.0)HLAGALS(0.99)PGEAWPFES(0.0)V s:Phosphorylated S CCDC9 59816.1 3 7 2003.1 103.17 HUMAN 1 2.3479 -1.8995 THLSRCDSDLCEMNA-p Q6UB98-2;S1627-p THLSRCDSDLCEMNA 0.409353922246247 0.161921260422195 0.138666666666667 0.236666666666667 7.15041932637061 10.3976647644627 0.138666666666667 0.236666666666667 0.192733881296613 0.0912501366615229 1.48731848767839 2.05002467438275 Q6UB98 ANKRD12 Q6UB98.2.S1627.p_ANKRD12 Q6UB98-2_S1627s _1_1_1627_1627 Q6UB98-2 Q6UB98|Q6UB98-2 Isoform 2 of Ankyrin repeat domain-containing protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17682.17682.3 17.9 15.47 99 1 1 1 0 722.6436 2085.9478 S1627s TMT10 1625 (R) CDsDLCEMNAGMPK (G) CDS(1.0)DLCEMNAGMPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANKRD12 234548.2 1 14 480.1 298.87 HUMAN 1 7.1504 10.3977 THMSRSASPNFNTSG-p O15018;S692-p THMSRSASPNFNTSG 0.96776831271533 0.969602467388836 0.00666666666666666 -0.00533333333333332 0.277111304526872 0.189906838540667 0.00666666666666666 -0.00533333333333332 0.938185830657607 0.957214604494484 0.0812209084209624 -0.0561747228407598 O15018 PDZD2 O15018.S692.p_PDZD2 O15018_S692s _1_1_692_692 O15018 O15018 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10581.10581.3 25.07 25.07 1.108 10 1 1 0 918.3998 2673.2186 S692s TMT10 690 (R) SAsPNFNTSGGASAGGSDEGSSSSLGR (K) S(0.0)AS(0.99)PNFNT(0.0)S(0.0)GGAS(0.0)AGGS(0.0)DEGS(0.0)S(0.0)S(0.0)S(0.0)LGR s:Phosphorylated S PDZD2 304146 2 4 85.1 628.64 HUMAN 1 0.2771 -0.1899 THPGSPGSPGPALRP-p Q8N0Y2;S235-p THPGSPGSPGPALRP 0.953405971129685 0.229755606665567 0.012 -0.119666666666667 0.408945152387031 8.41471616157787 0.012 -0.119666666666667 0.910134306160715 0.144055015607118 0.118251169927811 -1.70646695900579 Q8N0Y2 ZNF444 Q8N0Y2.S235.p_ZNF444 Q8N0Y2_S232sS235s_2_2_232_235 Q8N0Y2 Q8N0Y2|Q8N0Y2-2 Zinc finger protein 444 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6881.6881.4 9.96 9.96 2.052 3 2 2 0 666.3295 2502.3639 S232s S235s TMT10 225 (R) HRDTHPGsPGsPGPALRPLPAR (E) HRDT(0.0)HPGS(0.99)PGS(0.99)PGPALRPLPAR s:Phosphorylated S ZNF444 35830.9 1 4 2043.1 101.06 HUMAN 1 0.4089 -8.4147 THRKRKRSGNSDSIE-p Q7Z2E3;S132-p THRKRKRSGNSDSIE 0.560567639843939 0.825657726325012 0.0786666666666667 -0.023 4.63348444354378 1.16388152374467 0.0786666666666667 -0.023 0.344073761774079 0.764912657666678 1.03644260954405 -0.314464136747567 Q7Z2E3 APTX Q7Z2E3.S132.p_APTX Q7Z2E3_S132s _1_1_132_132 Q7Z2E3 Q7Z2E3|Q7Z2E3-7|Q7Z2E3-8|A0A0A0MRW7 Aprataxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3507.3507.3 11.32 11.32 2.133 3 1 1 0 519.9241 1477.792 S132s Hydrogen 130 (R) KRsGNSDSIER (D) KRS(0.99)GNS(0.0)DS(0.0)IER K:TMT10-Lys-Only,s:Phosphorylated S APTX 41138.7 16 1 1017.1 188.05 HUMAN 1 4.6335 -1.1639 THRKTVVTPLDMNRF-p Q92547;T779-p THRKTVVTPLDMNRF 0.617176487132491 0.0154961027760825 0.0953333333333333 -0.426666666666667 3.89120010891386 25.0236045369635 0.0953333333333333 -0.426666666666667 0.408206568865302 0.00314513684460253 0.896274464541176 -5.0434549497538 Q92547 TOPBP1 Q92547.T779.p_TOPBP1 Q92547_T779t _1_1_779_779 Q92547 Q92547 DNA topoisomerase 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19957.19957.3 14.6 8.76 3.401 3 1 1 0 725.3876 2094.1782 T779t TMT10 776 (K) TVVtPLDMNRFQSK (A) T(0.0)VVT(0.99)PLDMNRFQS(0.0)K K:TMT10,t:Phosphorylated T TOPBP1 172786.5 2 6 1135.1 173.67 HUMAN 1 3.8912 -25.0236 THRQLCRSPCLEPHI-p Q9C0D7-2;S124-p THRQLCRSPCLEPHI 0.43773303002828 0.0308357763925434 -0.122 -0.288 6.60860534936605 20.4219997247335 -0.122 -0.288 0.218343096484229 0.00907402617136269 -1.39231225119148 -3.96629527188729 Q9C0D7 ZC3H12C Q9C0D7.2.S124.p_ZC3H12C Q9C0D7-2_S124s _1_1_124_124 Q9C0D7-2 Q9C0D7-2|E9PP00 Isoform 2 of Probable ribonuclease ZC3H12C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15996.15996.4 17.33 16.1 99 1 1 1 0 573.0569 2209.235 S124s TMT10 120 (R) QLCRsPCLEPHILK (R) QLCRS(1.0)PCLEPHILK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZC3H12C 100617.7 4 2 1811.1 113.32 HUMAN 1 -6.6086 -20.422 THRRMVVSMPNLQDI-p E9PF32;S552-p THRRMVVSMPNLQDI 0.731450287132575 0.0517550922280282 -0.0476666666666667 0.244333333333333 2.57704543810737 17.1622304896513 -0.0476666666666667 0.244333333333333 0.552453152535926 0.0192210430331235 -0.633113627511246 3.29211754070736 E9PF32 NotFound E9PF32.S552.p_NotFound E9PF32_S552s _1_1_552_552 E9PF32 E9PF32|A2RUS2|A2RUS2-2 DENN domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.36390.36390.3 24.85 24.85 99 1 1 1 0 807.7356 2341.2279 S552s TMT10 549 (R) MVVsMPNLQDIAMPELAPR (N) MVVS(1.0)MPNLQDIAMPELAPR s:Phosphorylated S DENND3 146370.3 5 1 4380.1 32.32 HUMAN 1 -2.577 17.1622 THSGEKPYECYICHA-p P49711;Y407-p THSGEKPYECYICHA 0.413246308808783 0.406816730650782 -0.357333333333333 0.176333333333333 7.08209752785064 5.19893357069919 -0.357333333333333 0.176333333333333 0.19578988315982 0.302069337395283 -1.4753764381046 1.14015361196528 P49711 CTCF P49711.Y407.p_CTCF P49711_Y407y _1_1_407_407 P49711 P49711|P49711-2 Transcriptional repressor CTCF GG20160819_MSz_CCLE_T4D7_pY_Injection_01.9040.9079.4 27.04 27.04 8.168 4 1 1 0 637.2997 2466.2059 Y407y TMT10 400 (R) THSGEKPyECYICHAR (F) T(0.0)HS(0.0)GEKPY(0.99)ECY(0.0)ICHAR K:TMT10,C:Carbamidomethylation,y:Phosphorylated Y CTCF 84324.5 2 1 110.1 27.04 HUMAN 1 -7.0821 5.1989 THTGEKPYECNICKV-p O95365;Y410-p THTGEKPYECNICKV 0.560407569741121 0.0540543139764796 0.103666666666667 -0.608333333333333 4.63788438887171 16.8928255116078 0.103666666666667 -0.608333333333333 0.343725348617848 0.020451136567645 1.03725993000742 -3.23910682496077 O95365 ZBTB7A O95365.Y410.p_ZBTB7A O95365_Y410y _1_1_410_410 O95365 O95365 Zinc finger and BTB domain-containing protein 7A GG20160819_MSz_CCLE_T4D7_pY_Injection_02.9371.9371.4 15.17 13.16 3.024 3 1 1 0 626.8132 2424.2619 Y410y TMT10 403 (R) THTGEKPyECNICK (V) T(0.0)HT(0.0)GEKPY(0.99)ECNICK K:TMT10,C:Carbamidomethylation,y:Phosphorylated Y ZBTB7A 62236.8 1 1 237.1 15.17 HUMAN 1 4.6379 -16.8928 THVRRGESPGLHHFH-p Q5VT52-5;S923-p THVRRGESPGLHHFH 0.383778183580751 0.00239828931013772 0.236 1.105 7.69972138074598 40.1811073806621 0.236 1.105 0.169835260585107 9.59156031063445e-05 1.58302288641849 10.2131244353506 Q5VT52 RPRD2 Q5VT52.5.S923.p_RPRD2 Q5VT52-5_S923s _1_1_923_923 Q5VT52-5 Q5VT52-5 Isoform 5 of Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4339.4339.5 8.84 8.84 99 1 1 1 0 410.5917 1968.9626 S923s TMT10 920 (R) RGEsPGLHHFHHVDD (-) RGES(1.0)PGLHHFHHVDD s:Phosphorylated S RPRD2 100726.5 1 36 172.2 488.65 HUMAN 1 7.6997 40.1811 THVVNLGSNQYLFSV-p Q96RS6;S438-p THVVNLGSNQYLFSV 0.665261908909664 0.0879967699826289 0.0806666666666667 0.196 3.31077006479594 13.9730916150402 0.0806666666666667 0.196 0.466576642421514 0.0400581453915732 0.782856317035289 2.68637164792834 Q96RS6 NUDCD1 Q96RS6.S438.p_NUDCD1 Q96RS6_S438s _1_1_438_438 Q96RS6 Q96RS6|Q96RS6-2|Q96RS6-3 NudC domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30543.30543.3 14.98 14.98 1.107 5 1 1 0 957.1801 2789.5602 S438s TMT10 430 (K) TTHVVNLGsNQYLFSVIVDPK (E) T(0.0)T(0.0)HVVNLGS(0.99)NQY(0.0)LFS(0.0)VIVDPK K:TMT10,s:Phosphorylated S NUDCD1 67553.4 1 2 4573.1 29.59 HUMAN 1 3.3108 13.9731 TIAESEDSQESVDSV-p P16220;S111-p TIAESEDSQESVDSV 0.181255766963219 0.232751465588296 0.262 0.147666666666667 14.6172743850943 8.33860847797728 0.262 0.147666666666667 0.0345360418161028 0.146601749206328 2.80697410899456 1.69329427493739 P16220 CREB1 P16220.S111.p_CREB1 P16220_S111sS114s_2_2_111_114 P16220 P16220|P16220-3 Cyclic AMP-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23151.23151.4 11.46 11.46 1.196 10 2 2 0 941.4419 3602.8074 S111s S114s TMT10 95 (K) RLFSGTQISTIAESEDsQEsVDSVTDSQK (R) RLFS(0.0)GT(0.0)QIS(0.0)T(0.0)IAES(0.0)EDS(0.99)QES(0.99)VDS(0.0)VT(0.0)DS(0.0)QK K:TMT10,s:Phosphorylated S CREB1 36915.7 2 5 2816.1 69.58 HUMAN 1 14.6173 8.3386 TIAKSGTSEFLNKMT-p P14625;S172-p TIAKSGTSEFLNKMT 0.203469268152067 0.997566213620728 -0.218333333333333 -0.000333333333333315 13.4027663087116 0.0150219840441144 -0.218333333333333 -0.000333333333333306 0.0456797132630705 0.996547035587726 -2.58390288638294 -0.00453073674409841 P14625 HSP90B1 P14625.S172.p_HSP90B1 P14625_S172s _1_1_172_172 P14625 P14625 Endoplasmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17511.17511.2 10.67 10.67 10.671 3 1 1 0 760.8918 1440.8099 S172s TMT10 169 (K) SGTsEFLNK (M) S(0.0)GT(0.0)S(0.99)EFLNK K:TMT10,s:Phosphorylated S HSP90B1 92752.5 1 43 43.3 810.87 HUMAN 1 -13.4028 -0.015 TIAPALVSKKLNVTE-p P06733;S79-p TIAPALVSKKLNVTE 0.552777326044719 0.0352706764539189 0.0846666666666667 0.351333333333333 4.75179628084331 19.5551576705039 0.0846666666666667 0.351333333333333 0.334826923102213 0.011078583438745 1.0583707364697 3.78068837116934 P06733 ENO1 P06733.S79.p_ENO1 P06733_S79s _1_1_79_79 P06733 P06733 Alpha-enolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19421.19421.3 13.42 8.87 11.508 2 1 1 0 479.9549 1357.8819 S79s TMT10 72 (K) TIAPALVsK (K) T(0.0)IAPALVS(0.99)K K:TMT10,s:Phosphorylated S ENO1 47510.4 2 4 623.1 259.34 HUMAN 1 4.7518 19.5552 TICSGLLTDVEDQAA-p Q6PCB5;T285-p TICSGLLTDVEDQAA 0.758233909056801 0.100385761792329 0.0496666666666666 -0.187666666666667 2.30191459294219 13.1915952248251 0.0496666666666667 -0.187666666666667 0.588584120067186 0.0479557268140224 0.574671624851803 -2.54422877065916 Q6PCB5 RSBN1L Q6PCB5.T285.p_RSBN1L Q6PCB5_T285t _1_1_285_285 Q6PCB5 Q6PCB5|Q6PCB5-2 Round spermatid basic protein 1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29941.29941.3 22.27 22.27 5.413 4 1 1 0 863.1094 2507.3427 T285t TMT10 275 (K) SIQTICSGLLtDVEDQAAK (G) S(0.0)IQT(0.0)ICS(0.0)GLLT(0.99)DVEDQAAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T RSBN1L 95438.4 1 2 1544.1 132.85 HUMAN 1 2.3019 -13.1916 TIDFTPGSELLITKA-p O00159-3;S1022-p TIDFTPGSELLITKA 0.930978723493408 0.150404991662631 -0.0153333333333333 0.153666666666667 0.616157888099718 10.8247201250313 -0.0153333333333333 0.153666666666667 0.867729198054612 0.0827042804460586 -0.174615471788948 2.12448904099634 O00159 MYO1C O00159.3.S1022.p_MYO1C O00159-3_S1022s _1_1_1022_1022 O00159-3 O00159|O00159-3|F5H6E2|O00159-2 Isoform 3 of Unconventional myosin-Ic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29771.29771.3 8.47 8.47 2.872 4 1 1 0 749.0615 2165.2106 S1022s TMT10 1013 (R) DGTIDFTPGsELLITK (A) DGT(0.0)IDFT(0.0)PGS(0.99)ELLIT(0.0)K K:TMT10,s:Phosphorylated S MYO1C 120424.7 2 10 296.4 379.15 HUMAN 1 -0.6162 10.8247 TIESHTKSLPKVPAK-p P35658-3;S932-p TIESHTKSLPKVPAK 0.82086427017453 0.575715548276758 0.0563333333333333 -0.077 1.65347702562348 3.23270732276117 0.0563333333333334 -0.077 0.683364316667621 0.475039001859557 0.43061701940113 -0.767181565514571 P35658 NUP214 P35658.3.S932.p_NUP214 P35658-3_S932s _1_1_932_932 P35658-3 P35658-5|P35658-3|P35658-4 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14783.14783.3 11.09 3.61 99 1 1 1 0 536.3354 1527.0237 S932s TMT10 932 (K) sLPKVPAK (L) S(1.0)LPKVPAK K:TMT10,s:Phosphorylated S NUP214 214428.5 1 15 111.1 572.27 HUMAN 1 1.6535 -3.2327 TIESQSVSPDHNKEP-p Q9H3H1;S443-p TIESQSVSPDHNKEP 0.267158757798091 0.0499652291950844 -0.271 -0.268333333333333 10.8614071639733 17.3976794318796 -0.271 -0.268333333333333 0.0820085784069788 0.0182067344019866 -2.13184631662884 -3.33875744234839 Q9H3H1 TRIT1 Q9H3H1.S443.p_TRIT1 Q9H3H1_S443s _1_1_443_443 Q9H3H1 Q9H3H1|Q9H3H1-4|Q9H3H1-5|Q9H3H1-2|Q9H3H1-3|Q9H3H1-6|Q3T7B4 tRNA dimethylallyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.13269.13269.4 18.48 18.48 1.157 5 1 1 0 859.1958 3353.7904 S443s TMT10 428 (R) RLDSDAVNTIESQSVsPDHNKEPK (E) RLDS(0.0)DAVNT(0.0)IES(0.0)QS(0.0)VS(0.99)PDHNKEPK K:TMT10,s:Phosphorylated S TRIT1 53066.6 2 1 4198.1 35.57 HUMAN 1 -10.8614 -17.3977 TIEVRRCSMPSVICE-p Q6UB98-2;S1288-p TIEVRRCSMPSVICE 0.974486381113699 0.0473773781774267 0.008 0.302333333333333 0.219211724759456 17.7208251147007 0.00800000000000001 0.302333333333333 0.950777350818028 0.0169011979581715 0.0646454169258902 3.40325260235176 Q6UB98 ANKRD12 Q6UB98.2.S1288.p_ANKRD12 Q6UB98-2_S1288s _1_1_1288_1288 Q6UB98-2 Q6UB98|Q6UB98-2 Isoform 2 of Ankyrin repeat domain-containing protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11473.11473.4 14.78 14.78 1.784 3 1 1 0 536.5125 2063.06 S1288s TMT10 1286 (R) RCsMPSVICEHTK (Q) RCS(0.99)MPS(0.0)VICEHT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANKRD12 234548.2 1 10 480.1 298.87 HUMAN 1 0.2192 17.7208 TIFSEFITIEMLFHG-p A1XBS5;T189-p TIFSEFITIEMLFHG 0.297330507583042 0.37236988138142 -0.266333333333333 0.139666666666667 9.91190048015742 5.69087123369083 -0.266333333333333 0.139666666666667 0.102049281656371 0.269719829599385 -1.96640854285393 1.22901446031545 A1XBS5 FAM92A1 A1XBS5.T189.p_FAM92A1 A1XBS5_T182tT189t_2_2_182_189 A1XBS5 A1XBS5|A0A087WTS3|A1XBS5-3|A1XBS5-4|E5RFH7|E5RGP4 Protein FAM92A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14562.15272.4 7.21 7.21 1.127 3 2 2 0 722.6201 2727.5196 T182t T189t Hydrogen 179 (K) DIKtIFSEFItIEMLFHGK (A) DIKT(0.99)IFS(0.0)EFIT(0.99)IEMLFHGK K:TMT10-Lys-Only,t:Phosphorylated T FAM92A 33601.2 2 2 5955.1 15.03 HUMAN 1 -9.9119 5.6909 TIGECSMSLRTLSTQ-p Q8N9U0;S327-p TIGECSMSLRTLSTQ 0.885538071886065 0.909264943119755 -0.0213333333333333 0.0116666666666667 1.04243291404695 0.577569746963085 -0.0213333333333333 0.0116666666666667 0.786605010777007 0.875473541305034 -0.284488668509618 0.164263670545032 Q8N9U0 TC2N Q8N9U0.S327.p_TC2N Q8N9U0_S327s _1_1_327_327 Q8N9U0 Q8N9U0 Tandem C2 domains nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14429.14429.2 8.21 8.21 1.306 3 1 1 0 731.8348 1382.6969 S327s TMT10 320 (K) TIGECSMsLR (T) T(0.0)IGECS(0.0)MS(0.99)LR C:Carbamidomethylation,s:Phosphorylated S TC2N 55796.6 1 8 1080.1 179.95 HUMAN 1 -1.0424 0.5776 TIGGGDDSFNTFFSE-p P68363;S48-p TIGGGDDSFNTFFSE 0.427881757256438 0.969138530254666 -0.227666666666667 -0.00399999999999999 6.78763484876111 0.192372350278072 -0.227666666666667 -0.00399999999999998 0.209525321213123 0.956671343143276 -1.42378617829436 -0.0568888992539355 P68363 TUBA1B P68363.S48.p_TUBA1B P68363_S48s _1_1_48_48 P68363 F5H5D3|Q71U36|P68363|Q13748|Q6PEY2|Q9BQE3|Q13748-2|Q71U36-2|P68363-2|A0A1W2PQM2|F8W0F6|F8VS66 Tubulin alpha-1B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.27245.27322.2 18.77 18.77 1.139 5 1 1 0 1273.5924 2466.2189 S48s TMT10 41 (K) TIGGGDDsFNTFFSETGAGK (H) T(0.0)IGGGDDS(0.99)FNT(0.0)FFS(0.0)ET(0.0)GAGK K:TMT10,s:Phosphorylated S TUBA1B 50835.4 12 3 868.1 210.03 HUMAN 1 -6.7876 -0.1924 TIGMLVPSPVAISAI-p Q9C0B9;S754-p TIGMLVPSPVAISAI 0.214410861659776 0.234405173609321 -0.205666666666667 -0.172666666666667 12.8919605465673 8.29668424824594 -0.205666666666667 -0.172666666666667 0.0513811647927201 0.148023808912058 -2.49161689788237 -1.68603671910912 Q9C0B9 ZCCHC2 Q9C0B9.S754.p_ZCCHC2 Q9C0B9_S754s _1_1_754_754 Q9C0B9 Q9C0B9|Q9C0B9-2 Zinc finger CCHC domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31920.31920.3 11.94 11.94 5.372 3 1 1 0 645.3632 1854.1084 S754s TMT10 747 (K) TIGMLVPsPVAISAIR (E) T(0.0)IGMLVPS(0.99)PVAIS(0.0)AIR s:Phosphorylated S ZCCHC2 127074.8 1 2 4050.1 38.56 HUMAN 1 -12.892 -8.2967 TIGPASRSVETLKEM-p P14618;S57-p TIGPASRSVETLKEM 0.45565854915725 0.15510277285571 0.126666666666667 0.285333333333333 6.29535001376237 10.6441024700564 0.126666666666667 0.285333333333333 0.234674012271941 0.0862163738422076 1.33701186299188 2.09296113834824 P14618 PKM P14618.S57.p_PKM P14618_S57s _1_1_57_57 P14618 P14618|P14618-2|H3BQ34 Pyruvate kinase PKM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20303.20303.3 12.55 9.03 11.677 5 1 1 0 852.4623 2475.4005 S57s TMT10 44 (R) NTGIICTIGPASRsVETLK (E) NT(0.0)GIICT(0.0)IGPAS(0.0)RS(0.99)VET(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PKM 58506.4 1 4 502.1 291.2 HUMAN 1 6.2954 10.6441 TIIISGISKTSLSQD-p Q9Y426;S519-p TIIISGISKTSLSQD 0.2460723690647 0.241657605758473 -0.176 -0.121333333333333 11.6508065015538 8.124182279095 -0.176 -0.121333333333333 0.0683784654050461 0.154021650180657 -2.27054611665082 -1.65616273852542 Q9Y426 C2CD2 Q9Y426.S519.p_C2CD2 Q9Y426_S519s _1_1_519_519 Q9Y426 Q9Y426|Q9Y426-3|Q9Y426-2 C2 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21749.21749.3 14.81 11.42 3.79 4 1 1 0 519.6415 1476.9402 S519s TMT10 511 (K) STIIISGIsK (T) S(0.0)T(0.0)IIIS(0.0)GIS(0.99)K K:TMT10,s:Phosphorylated S C2CD2 76045.3 4 5 1354.1 150.76 HUMAN 1 -11.6508 -8.1242 TIKIIAPSPVKSFKK-p Q9HCS5;S389-p TIKIIAPSPVKSFKK 0.177928026787036 0.214886024943203 -0.226 -0.147333333333333 14.8523057564041 8.78676823373147 -0.226 -0.147333333333333 0.0327166949273092 0.132227923126647 -2.85079662078679 -1.7708316207523 Q9HCS5 EPB41L4A Q9HCS5.S389.p_EPB41L4A Q9HCS5_S389s _1_1_389_389 Q9HCS5 Q9HCS5 Band 4.1-like protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18408.18408.2 10.7 4.12 99 1 1 1 0 681.9117 1282.8499 S389s TMT10 385 (K) IIAPsPVK (S) IIAPS(1.0)PVK K:TMT10,s:Phosphorylated S EPB41L4A 79741.9 4 2 696.1 241.4 HUMAN 1 -14.8523 -8.7868 TIKKLLASANLEEVT-p P35659;S335-p TIKKLLASANLEEVT 0.800790913034382 0.682930887714224 0.038 0.0413333333333334 1.85746533968393 2.26649247620479 0.038 0.0413333333333334 0.652008813055249 0.593404386557297 0.477000119973129 0.566972889723117 P35659 DEK P35659.S335.p_DEK P35659_S335s _1_1_335_335 P35659 P35659|B4DFG0 Protein DEK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28275.28275.3 14.29 14.29 7.574 2 1 1 0 653.0214 1877.0818 S335s TMT10 332 (K) LLAsANLEEVTMK (Q) LLAS(0.99)ANLEEVT(0.0)MK K:TMT10,s:Phosphorylated S DEK 42958.8 1 6 488.1 294.94 HUMAN 1 1.8575 2.2665 TIKQEPVSPKKKENA-p Q15596;S736-p TIKQEPVSPKKKENA 0.824283520934974 0.225870754095915 -0.0376666666666667 0.176666666666667 1.6182091113533 8.50984885971785 -0.0376666666666667 0.176666666666667 0.688936332626487 0.140933784440839 -0.422487427270282 1.7229287485648 Q15596 NCOA2 Q15596.S736.p_NCOA2 Q15596_S736s _1_1_736_736 Q15596 Q15596|E7EWM1 Nuclear receptor coactivator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16184.16184.3 22.28 16.07 5.33 8 1 1 0 1123.5873 3288.7778 S736s TMT10 714 (K) DLSQESSSTAPGSEVTIKQEPVsPK (K) DLS(0.0)QES(0.0)S(0.0)S(0.0)T(0.0)APGS(0.0)EVT(0.0)IKQEPVS(0.99)PK K:TMT10,s:Phosphorylated S NCOA2 160009.7 11 12 290.1 381.81 HUMAN 1 -1.6182 8.5098 TIKVLFASQEIPASP-p O75369-8;S827-p TIKVLFASQEIPASP 0.574212061375916 0.439279747565624 0.0883333333333333 0.115333333333333 4.43517905525123 4.75852051392988 0.0883333333333334 0.115333333333333 0.360148901511284 0.334308907725356 0.999452823283805 1.05940857683786 O75369 FLNB O75369.8.S827.p_FLNB O75369-8_S827s _1_1_827_827 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|O75369-4|O75369-5 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29705.29705.3 18.58 16.61 9.636 2 1 1 0 624.3264 1791.0002 S827s TMT10 823 (K) VLFAsQEIPASPFR (V) VLFAS(0.99)QEIPAS(0.0)PFR s:Phosphorylated S FLNB 283797.6 2 13 67.1 680.07 HUMAN 1 4.4352 4.7585 TILEKTVSPDRLELE-p Q14974;S12-p TILEKTVSPDRLELE 0.569737548726187 0.160446400381887 -0.098 -0.345 4.49572385069916 10.4523283038749 -0.098 -0.345 0.355162917556997 0.0901087924238863 -1.01077862816501 -2.05954107320222 Q14974 KPNB1 Q14974.S12.p_KPNB1 Q14974_S12s _1_1_12_12 Q14974 Q14974 Importin subunit beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17503.17503.3 17.13 12.74 2.148 2 1 1 0 699.0458 2015.1537 S12s TMT10 10 (K) TVsPDRLELEAAQK (F) T(0.0)VS(0.99)PDRLELEAAQK K:TMT10,s:Phosphorylated S KPNB1 98480.7 1 1 4368.1 32.65 HUMAN 1 -4.4957 -10.4523 TILLVQPTKRPEGRT-p P84090;T11-p TILLVQPTKRPEGRT 0.281272699668913 0.389935073204063 0.168333333333333 -0.0893333333333333 10.4191255847613 5.43934720516054 0.168333333333333 -0.0893333333333333 0.0908003330572333 0.285802010456946 2.05463037557485 -1.18373882815801 P84090 ERH P84090.T11.p_ERH P84090_T11t _1_1_11_11 P84090 P84090|G3V279 Enhancer of rudimentary homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13480.13480.3 11.49 11.49 3.704 3 1 1 0 728.4023 2103.2236 T11t Acetyl 2 (M) SHTILLVQPtKRPEGR (T) S(0.0)HT(0.0)ILLVQPT(0.99)KRPEGR K:TMT10,t:Phosphorylated T ERH 12429.9 2 2 4064.1 38.28 HUMAN 1 10.4191 -5.4393 TILNLENSNKSLSGE-p Q8IX12;S1075-p TILNLENSNKSLSGE 0.207615995305328 0.231012982937776 -0.258 -0.131333333333333 13.1736214124417 8.3820865442359 -0.258 -0.131333333333333 0.048154608764643 0.145141412601923 -2.54240015344794 -1.70081979784656 Q8IX12 CCAR1 Q8IX12.S1075.p_CCAR1 Q8IX12_S1075s _1_1_1075_1075 Q8IX12 Q8IX12|Q8IX12-2 Cell division cycle and apoptosis regulator protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20557.20557.3 9.31 6.8 9.312 2 1 1 0 561.9748 1603.9419 S1075s TMT10 1068 (K) TILNLENsNK (S) T(0.0)ILNLENS(0.99)NK K:TMT10,s:Phosphorylated S CCAR1 133503.3 1 9 1111.1 176.02 HUMAN 1 -13.1736 -8.3821 TILQDDNSPGTLTLR-p Q99618;S209-p TILQDDNSPGTLTLR 0.385403228106059 0.0907147942259609 0.130666666666667 -0.214666666666667 7.66506683677124 13.7903145217568 0.130666666666667 -0.214666666666667 0.171195882990687 0.041780010791945 1.57699890630466 -2.65293736707088 Q99618 CDCA3 Q99618.S209.p_CDCA3 Q99618_S209s _1_1_209_209 Q99618 Q99618|J3KMY0 Cell division cycle-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29050.29050.3 14.16 14.16 2.795 5 1 1 0 750.7239 2170.1917 S209s TMT10 199 (R) SPLTILQDDNsPGTLTLR (Q) S(0.0)PLT(0.0)ILQDDNS(0.99)PGT(0.0)LT(0.0)LR s:Phosphorylated S CDCA3 28997.8 2 8 831.1 215.73 HUMAN 1 7.6651 -13.7903 TILRRSQSYIPTSGC-p Q9HB19;S184-p TILRRSQSYIPTSGC 0.734662727835375 0.687193374128327 0.0613333333333333 -0.0613333333333333 2.53629148575991 2.23063948452601 0.0613333333333333 -0.0613333333333333 0.557661742493734 0.598323487382527 0.624544753342707 -0.559226170791948 Q9HB19 PLEKHA2 Q9HB19.S184.p_PLEKHA2 Q9HB19_S184s _1_1_184_184 Q9HB19 Q9HB19|A8K727|A0A087X038|A0A087WZ32|E5RHB5 Pleckstrin homology domain-containing family A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9285.9285.2 11.89 5.01 1.872 5 1 1 0 782.8531 1484.7365 S184s TMT10 182 (R) SQsYIPTSGCR (A) S(0.0)QS(0.99)Y(0.0)IPT(0.0)S(0.0)GCR C:Carbamidomethylation,s:Phosphorylated S PLEKHA2 47881.8 2 1 3407.1 51.78 HUMAN 1 2.5363 -2.2306 TINFRVMSCDSFPIR-p C9J6P4;S702-p TINFRVMSCDSFPIR 0.305986635992007 0.705682687715846 0.164333333333333 -0.037 9.64036609521538 2.07926117470945 0.164333333333333 -0.037 0.108633404555751 0.6195464638584 1.91929174859762 -0.526222318098905 C9J6P4 ZC3HAV1 C9J6P4.S702.p_ZC3HAV1 C9J6P4_S702s _1_1_702_702 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16062.16062.3 8.33 3.81 2 2 1 1 0 559.5998 1596.8188 S702s TMT10 700 (R) VMsCDSFPIRR (L) VMS(0.99)CDS(0.0)FPIRR C:Carbamidomethylation,s:Phosphorylated S ZC3HAV1 115909.2 1 17 361.1 343.37 HUMAN 1 9.6404 -2.0793 TIPKDADSQNPDAPE-p P53621-2;S402-p TIPKDADSQNPDAPE 0.754219877579276 0.741391854046363 0.102666666666667 -0.0663333333333333 2.34061649874298 1.7911888625123 0.102666666666667 -0.0663333333333333 0.583362287738049 0.662035249584786 0.582979167205553 -0.461994502613217 P53621 COPA P53621.2.S402.p_COPA P53621-2_S402s _1_1_402_402 P53621-2 P53621-2 Isoform 2 of Coatomer subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19210.19210.4 23.41 19.28 3.257 7 1 1 0 1020.0027 3997.0394 S402s TMT10 383 (R) ASNLENSTYDLYTIPKDADsQNPDAPEGKR (S) AS(0.0)NLENS(0.0)T(0.0)Y(0.0)DLY(0.0)T(0.0)IPKDADS(0.99)QNPDAPEGKR K:TMT10,s:Phosphorylated S COPA 140918.9 8 6 545.1 275.81 HUMAN 1 2.3406 -1.7912 TIPVSPPSTTKPSRA-p Q71RC2-4;S592-p TIPVSPPSTTKPSRA 0.896219707730551 0.00232985334139993 -0.0213333333333333 -0.807 0.931984528046024 40.5119994785166 -0.0213333333333333 -0.807 0.806866244859279 8.88791826607373e-05 -0.25672935359513 -10.3640700196049 Q71RC2 LARP4 Q71RC2.4.S592.p_LARP4 Q71RC2-4_S592s _1_1_592_592 Q71RC2-4 Q71RC2-4|Q71RC2-3|Q71RC2-5|Q71RC2-6|Q71RC2-2 Isoform 4 of La-related protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16279.16279.3 19.4 20.26 1.181 7 1 1 0 878.8025 2554.4241 S592s TMT10 579 (K) DGLNQTTIPVSPPsTTKPSR (A) DGLNQT(0.0)T(0.0)IPVS(0.0)PPS(0.99)T(0.0)T(0.0)KPS(0.0)R K:TMT10,s:Phosphorylated S LARP4 81926.9 1 5 841.1 214.37 HUMAN 1 -0.932 -40.512 TIPWRSKSPEILSST-p Q4KMZ1-3;S518-p TIPWRSKSPEILSST 0.137831886053651 0.0377617688688658 -0.334 -0.281333333333333 17.6172098092513 19.1136610699952 -0.334 -0.281333333333333 0.0173092806304061 0.0122640494507732 -3.38520604313567 -3.6880039727591 Q4KMZ1 IQCC Q4KMZ1.3.S518.p_IQCC Q4KMZ1-3_S518s _1_1_518_518 Q4KMZ1-3 Q4KMZ1-3 Isoform 3 of IQ domain-containing protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.13111.13111.3 15.29 15.29 1.377 5 1 1 0 648.7057 1864.1358 S518s TMT10 516 (R) SKsPEILSSTK (A) S(0.0)KS(0.99)PEILS(0.0)S(0.0)T(0.0)K K:TMT10,s:Phosphorylated S IQCC 62649.7 2 1 5926.1 15.29 HUMAN 1 -17.6172 -19.1137 TISENSPSPSERNRR-p H3BQB6;S76-p TISENSPSPSERNRR 0.657302725891418 0.143341182728233 0.0956666666666666 0.163666666666667 3.41943262644951 11.1130476015312 0.0956666666666667 0.163666666666667 0.455047504850634 0.0773918520575633 0.804388969071112 2.17493405005688 H3BQB6 STMND1 H3BQB6.S76.p_STMND1 H3BQB6_S76s _1_1_76_76 H3BQB6 H3BQB6 Stathmin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29637.29637.5 27.34 22.02 1.411 7 1 1 0 711.1423 3471.7111 S76s TMT10 50 (K) NTVDIAEGLEQVQMGSLPGTISENSPsPSER (N) NT(0.0)VDIAEGLEQVQMGS(0.0)LPGT(0.0)IS(0.0)ENS(0.0)PS(0.99)PS(0.0)ER s:Phosphorylated S STMND1 31154.5 3 3 1973.1 104.66 HUMAN 1 3.4194 11.113 TISFGSVSPGGVKLE-p Q9Y2J2;S962-p TISFGSVSPGGVKLE 0.28377835512685 0.641542252168238 -0.221666666666667 -0.0456666666666667 10.3237483269201 2.62647258723335 -0.221666666666667 -0.0456666666666667 0.0928164956498634 0.546201314863615 -2.03801703514201 -0.643382959656148 Q9Y2J2 EPB41L3 Q9Y2J2.S962.p_EPB41L3 Q9Y2J2_S962s _1_1_962_962 Q9Y2J2 Q9Y2J2|A0A0A0MSA4|A0A0A0MRA8|Q9Y2J2-4|Q9Y2J2-2|A8K968 Band 4.1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27079.27079.4 21.51 21.51 1.303 7 1 1 0 726.9033 2824.6275 S962s TMT10 953 (K) TETISFGSVsPGGVKLEISTK (E) T(0.0)ET(0.0)IS(0.0)FGS(0.0)VS(0.99)PGGVKLEIS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S EPB41L3 121531.2 3 35 469.4 302.69 HUMAN 1 -10.3237 -2.6265 TISLSEDS_______-p Q6UXG2-4;S1004-p TISLSEDS_______ 0.241020600915403 0.0430342534426821 0.341333333333333 -0.248 11.8110428322877 18.3046747563022 0.341333333333333 -0.248 0.0659015632745969 0.0147751712889478 2.29886304595829 -3.52124567409607 Q6UXG2 KIAA1324 Q6UXG2.4.S1004.p_KIAA1324 Q6UXG2-4_S1004s _1_1_1004_1004 Q6UXG2-4 Q6UXG2-4 Isoform 4 of UPF0577 protein KIAA1324 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22758.22758.3 15.55 15.55 1.93 7 1 1 0 811.4178 2352.2699 S1004s TMT10 987 (K) SFTSKQPAPVTISLSEDs (-) S(0.0)FT(0.0)S(0.0)KQPAPVT(0.0)IS(0.0)LS(0.0)EDS(0.99) K:TMT10,s:Phosphorylated S KIAA1324 113552.4 2 4 3926.1 40.58 HUMAN 1 11.811 -18.3047 TISQRIVSAQSLAED-p Q15388;S135-p TISQRIVSAQSLAED 0.856803399219307 0.0523931863384115 0.05 -0.297333333333333 1.30639547801989 17.0846818224193 0.05 -0.297333333333333 0.740219381432725 0.0195673411908217 0.349061925807693 -3.2768197937974 Q15388 TOMM20 Q15388.S135.p_TOMM20 Q15388_S135s _1_1_135_135 Q15388 Q15388 Mitochondrial import receptor subunit TOM20 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23813.23813.2 13.06 13.06 1.286 2 1 1 0 842.8972 1604.8217 S135s TMT10 133 (R) IVsAQSLAEDDVE (-) IVS(0.99)AQS(0.0)LAEDDVE s:Phosphorylated S TOMM20 16468.7 1 2 5032.1 23.71 HUMAN 1 1.3064 -17.0847 TISSSDESEEEKPKP-p Q9NUW8;S18-p TISSSDESEEEKPKP 0.32809450446442 0.00129606731851265 -0.180333333333333 1.136 9.05039481149122 47.1696256923085 -0.180333333333333 1.136 0.124440147970157 1.91883411311838e-05 -1.8170869512759 13.8790280702209 Q9NUW8 TDP1 Q9NUW8.S18.p_TDP1 Q9NUW8_S18s _1_1_18_18 Q9NUW8 Q9NUW8|E7EPD8|G3V2F4|Q9BRS7|G3V5H9|G3V4W8 Tyrosyl-DNA phosphodiesterase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18384.18384.4 20.49 16.78 1.212 9 1 1 0 1041.0385 4081.1569 S18s TMT10 10 (R) WTISSSDEsEEEKPKPDKPSTSSLLCAR (Q) WT(0.0)IS(0.0)S(0.0)S(0.0)DES(0.99)EEEKPKPDKPS(0.0)T(0.0)S(0.0)S(0.0)LLCAR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TDP1 68818.5 1 4 1900.1 108.34 HUMAN 1 -9.0504 47.1696 TIVQEEDTQPLTEPI-p Q15029;T86-p TIVQEEDTQPLTEPI 0.217359173580377 0.066633211931621 0.294666666666667 0.250333333333333 12.7668799279054 15.6444725317295 0.294666666666667 0.250333333333333 0.0528825035483616 0.0272616882308779 2.46914356656082 2.99815871413972 Q15029 EFTUD2 Q15029.T86.p_EFTUD2 Q15029_T86t _1_1_86_86 Q15029 Q15029|Q15029-3|Q15029-2 116 kDa U5 small nuclear ribonucleoprotein component HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29060.29060.5 24.72 24.72 1.167 7 1 1 0 1006.7426 4949.7097 T86t TMT10 64 (K) KYYPTAEEVYGPEVETIVQEEDtQPLTEPIIKPVK (T) KY(0.0)Y(0.0)PT(0.0)AEEVY(0.0)GPEVET(0.0)IVQEEDT(0.99)QPLT(0.0)EPIIKPVK K:TMT10,t:Phosphorylated T EFTUD2 110403.7 2 2 1913.1 107.79 HUMAN 1 12.7669 15.6445 TKAPVPGTPDSLSSG-p Q9UJZ1;T327-p TKAPVPGTPDSLSSG 0.438644538660338 0.0989727890325672 0.127333333333333 0.254 6.5906186524821 13.2766788759573 0.127333333333333 0.254 0.219249259253827 0.0470253582081993 1.38914516542078 2.55960432191379 Q9UJZ1 STOML2 Q9UJZ1.T327.p_STOML2 Q9UJZ1_T327t _1_1_327_327 Q9UJZ1 Q9UJZ1|Q9UJZ1-2|A0A087WYB4 Stomatin-like protein 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12346.12346.3 17.85 17.85 5.872 6 1 1 0 608.6298 1743.9075 T327t TMT10 322 (K) APVPGtPDSLSSGSSR (D) APVPGT(0.99)PDS(0.0)LS(0.0)S(0.0)GS(0.0)S(0.0)R t:Phosphorylated T STOML2 38647.5 4 2 3350.1 53.17 HUMAN 1 6.5906 13.2767 TKAQRENSPAAFPDR-p Q9Y5B0;S740-p TKAQRENSPAAFPDR 0.416349069681747 0.0340853782254752 0.118333333333333 0.285333333333333 7.02450977395797 19.7746136107905 0.118333333333333 0.285333333333333 0.198403359936558 0.0105326739153268 1.46530284021919 3.8272162406935 Q9Y5B0 CTDP1 Q9Y5B0.S740.p_CTDP1 Q9Y5B0_S740s _1_1_740_740 Q9Y5B0 Q9Y5B0|Q9Y5B0-4|A0A0A0MR03 RNA polymerase II subunit A C-terminal domain phosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24184.24184.5 21.55 17.45 3.385 2 1 1 0 762.4035 3728.0147 S740s TMT10 735 (K) AQRENsPAAFPDREGVPPTALFHPMPVLPK (A) AQRENS(0.99)PAAFPDREGVPPT(0.0)ALFHPMPVLPK K:TMT10,s:Phosphorylated S CTDP1 105367.3 9 3 1257.1 161.48 HUMAN 1 7.0245 19.7746 TKASPVDSWKNQTFQ-p Q99550;S520-p TKASPVDSWKNQTFQ 0.660414873314641 0.0247321482775332 0.086 0.462 3.37367891585154 21.8622918940268 0.086 0.462 0.459866854553856 0.00651284602167478 0.795340427927452 4.28601403599494 Q99550 MPHOSPH9 Q99550.S520.p_MPHOSPH9 Q99550_S516sS520s_2_2_516_520 Q99550 Q99550|Q99550-2|A0A0A0MTP3 M-phase phosphoprotein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15223.15223.4 8.3 6.53 1.313 7 2 2 0 889.431 3394.7747 S516s S520s TMT10 509 (K) YPSHTKAsPVDsWKNQTFQNESR (T) Y(0.0)PS(0.0)HT(0.0)KAS(0.99)PVDS(0.99)WKNQT(0.0)FQNES(0.0)R K:TMT10,s:Phosphorylated S MPHOSPH9 133763.4 2 10 1356.1 150.46 HUMAN 1 3.3737 21.8623 TKASRTKSPGPARRL-p Q6ZW31;S159-p TKASRTKSPGPARRL 0.0576036189507777 0.47653906495753 0.491666666666667 -0.112 27.0449360362229 4.29265477093634 0.491666666666667 -0.112 0.00197472396333245 0.37216413887357 5.58104744330587 -0.972499870437973 Q6ZW31 SYDE1 Q6ZW31.S159.p_SYDE1 Q6ZW31_S159s _1_1_159_159 Q6ZW31 Q6ZW31|Q6ZW31-2 Rho GTPase-activating protein SYDE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.3970.3970.3 9.81 9.81 1.369 2 1 1 0 451.2554 1271.7836 S159s TMT10 157 (R) TKsPGPAR (R) T(0.0)KS(0.99)PGPAR K:TMT10,s:Phosphorylated S SYDE1 80475.9 1 1 5821.1 16.02 HUMAN 1 27.0449 -4.2927 TKASVRKSFSEDVFQ-p Q9UKA4;S18-p TKASVRKSFSEDVFQ 0.00874686268802314 0.00244980233876088 -1.231 -0.944 50.6389232624987 40.0315840331688 -1.231 -0.944 8.63192530813249e-06 9.92753888188103e-05 -16.18277242151 -10.1455775595811 Q9UKA4 AKAP11 Q9UKA4.S18.p_AKAP11 Q9UKA4_S18s _1_1_18_18 Q9UKA4 Q9UKA4 A-kinase anchor protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24838.24838.2 13.42 13.42 2.238 3 1 1 0 905.956 1730.9365 S18s TMT10 18 (K) sFSEDVFQSVK (S) S(0.99)FS(0.0)EDVFQS(0.0)VK K:TMT10,s:Phosphorylated S AKAP11 213075.9 3 1 688.1 243.29 HUMAN 1 -50.6389 -40.0316 TKATPSVSVSKNVNV-p P50851;S1671-p TKATPSVSVSKNVNV 0.660154229134287 0.0969628537763046 0.0633333333333333 -0.189666666666667 3.3785628638658 13.4024551800961 0.0633333333333334 -0.189666666666667 0.459349992492657 0.0456829858754648 0.796307547928726 -2.5823767980569 P50851 LRBA P50851.S1671.p_LRBA P50851_S1671s _1_1_1671_1671 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11887.11887.2 11.57 5.33 1.109 4 1 1 0 707.3914 1333.8091 S1671s TMT10 1666 (K) ATPSVsVSK (N) AT(0.0)PS(0.0)VS(0.99)VS(0.0)K K:TMT10,s:Phosphorylated S LRBA 321783.7 2 19 74.1 649.16 HUMAN 1 3.3786 -13.4025 TKCGKRMSECPICRQ-p Q969K3-2;S355-p TKCGKRMSECPICRQ 0.0651762166919556 0.885150204505266 0.516333333333333 -0.032 25.6206790148369 0.744890388062758 0.516333333333333 -0.032 0.00274114556320795 0.842385652210037 5.20271291594524 -0.208583041541172 Q969K3 RNF34 Q969K3.2.S355.p_RNF34 Q969K3-2_S355s _1_1_355_355 Q969K3-2 Q969K3-2|A0A087WTM5 Isoform 2 of E3 ubiquitin-protein ligase RNF34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6672.6672.3 8.92 8.92 99 1 1 1 0 506.5596 1437.6962 S355s TMT10 353 (K) RMsECPICR (Q) RMS(1.0)ECPICR C:Carbamidomethylation,s:Phosphorylated S RNF34 43108.4 1 4 1566.1 131.12 HUMAN 1 25.6207 -0.7449 TKCPKQNSIENDIEE-p Q12830;S1310-p TKCPKQNSIENDIEE 0.781374547736925 0.00819186374424037 -0.0816666666666667 0.487333333333333 2.0586222116046 29.6973232758867 -0.0816666666666667 0.487333333333333 0.622497739699479 0.00107217992740588 -0.521745562693366 6.33065805257914 Q12830 BPTF Q12830.S1310.p_BPTF Q12830_S1310s _1_1_1310_1310 Q12830 Q12830|Q12830-2|Q12830-4 Nucleosome-remodeling factor subunit BPTF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16807.16807.2 15.37 15.37 99 1 1 1 0 928.9548 1776.938 S1310s TMT10 1308 (K) QNsIENDIEEK (V) QNS(1.0)IENDIEEK K:TMT10,s:Phosphorylated S BPTF 340995.1 6 13 94.1 610.41 HUMAN 1 -2.0586 29.6973 TKDDEGATPIKRRRV-p Q70CQ2;T3350-p TKDDEGATPIKRRRV 0.120525916396757 0.00101854180503129 -0.306 -1.31833333333333 19.105433887133 51.9277091408806 -0.306 -1.31833333333333 0.0122873042265336 6.41547897322754e-06 -3.68954248607354 -17.0553079409639 Q70CQ2 USP34 Q70CQ2.T3350.p_USP34 Q70CQ2_T3350t _1_1_3350_3350 Q70CQ2 Q70CQ2|Q70CQ2-2|Q70CQ2-3 Ubiquitin carboxyl-terminal hydrolase 34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8701.8701.3 12.82 6.2 7.184 2 1 1 0 648.022 1862.0838 T3350t TMT10 3343 (K) TKDDEGAtPIK (R) T(0.0)KDDEGAT(0.99)PIK K:TMT10,t:Phosphorylated T USP34 409988.3 4 5 713.1 238.32 HUMAN 1 -19.1054 -51.9277 TKDEPLKTPDGKEKD-p Q6UB98-2;T988-p TKDEPLKTPDGKEKD 0.143507905748536 0.0180870943038086 0.687 -0.718333333333333 17.2332210912054 23.9966500047733 0.687 -0.718333333333333 0.018909406186607 0.00398414374922215 3.30871176908837 -4.78839943310574 Q6UB98 ANKRD12 Q6UB98.2.T988.p_ANKRD12 Q6UB98-2_T988t _1_1_988_988 Q6UB98-2 Q6UB98|Q6UB98-2 Isoform 2 of Ankyrin repeat domain-containing protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9283.9283.4 10.79 10.79 4.446 2 1 1 0 703.66 2731.6578 T988t TMT10 981 (K) TKDEPLKtPDGKEK (D) T(0.0)KDEPLKT(0.99)PDGKEK K:TMT10,t:Phosphorylated T ANKRD12 234548.2 1 6 480.1 298.87 HUMAN 1 17.2332 -23.9967 TKDMDEPSPVPNVEE-p Q8TAQ2;S347-p TKDMDEPSPVPNVEE 0.329350427440409 0.0421918828246993 -0.203333333333333 0.408666666666667 9.0173522249027 18.4170585687236 -0.203333333333333 0.408666666666667 0.125390541390791 0.0143977339162011 -1.81136672596272 3.54418051578764 Q8TAQ2 SMARCC2 Q8TAQ2.S347.p_SMARCC2 Q8TAQ2_S347s _1_1_347_347 Q8TAQ2 F8VXC8|Q8TAQ2|Q8TAQ2-3|Q8TAQ2-2 SWI/SNF complex subunit SMARCC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25476.25476.2 22.09 18 5.471 2 1 1 0 1267.6286 2454.2838 S347s TMT10 342 (K) DMDEPsPVPNVEEVTLPK (T) DMDEPS(0.99)PVPNVEEVT(0.0)LPK K:TMT10,s:Phosphorylated S SMARCC2 133276.4 14 7 499.1 292.05 HUMAN 1 -9.0174 18.4171 TKEDQALSKEEEMET-p Q9NWZ8;S117-p TKEDQALSKEEEMET 0.354276950518795 0.476930152373407 -0.441666666666667 -0.337333333333333 8.37526058742611 4.28816644622098 -0.441666666666667 -0.337333333333333 0.145369715756734 0.372548960008692 -1.70020396752362 -0.971654070473899 Q9NWZ8 GEMIN8 Q9NWZ8.S117.p_GEMIN8 Q9NWZ8_S117s _1_1_117_117 Q9NWZ8 Q9NWZ8 Gem-associated protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12478.12478.4 9.49 7.77 8.922 3 1 1 0 547.3054 2106.2373 S117s TMT10 106 (R) IQASTKEDQALsK (E) IQAS(0.0)T(0.0)KEDQALS(0.99)K K:TMT10,s:Phosphorylated S GEMIN8 28921.4 2 1 2387.1 85.57 HUMAN 1 -8.3753 -4.2882 TKEDQKMSPKATEET-p Q9UHF7-2;S170-p TKEDQKMSPKATEET 0.39245931987608 0.0981690952165844 -0.249 0.327333333333333 7.49130712656833 13.3248379938371 -0.249 0.327333333333333 0.178184239312912 0.0465067724402738 -1.54676899079563 2.56831763708176 Q9UHF7 TRPS1 Q9UHF7.2.S170.p_TRPS1 Q9UHF7-2_S170s _1_1_170_170 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3|E5RFF3|E5RJ97 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13357.13357.5 22.16 14.9 1.333 6 1 1 0 930.0529 4566.2568 S170s TMT10 140 (K) SPQRAEADDPQDMACTPSGDSLETKEDQKMsPK (A) S(0.0)PQRAEADDPQDMACT(0.0)PS(0.0)GDS(0.0)LET(0.0)KEDQKMS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TRPS1 145246 26 6 14.1 1150.14 HUMAN 1 -7.4913 13.3248 TKEENPESDGEPVVE-p Q13439-5;S288-p TKEENPESDGEPVVE 0.976029394576063 0.191477713614561 0.00466666666666666 0.135 0.206538753968819 9.44254363705642 0.00466666666666665 0.135 0.953555827476712 0.113696117934686 0.0609908452879945 1.88428686970288 Q13439 GOLGA4 Q13439.5.S288.p_GOLGA4 Q13439-5_S288s _1_1_288_288 Q13439-5 Q13439-5|Q13439-4|Q13439-3|A0A087WTW2 Isoform 5 of Golgin subfamily A member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29511.29990.5 29.55 29.55 7.612 4 1 1 0 1132.5854 5578.9285 S288s TMT10 259 (R) NGPMNVDVLKPLPQLEPQAEVFTKEENPEsDGEPVVEDGTSVK (T) NGPMNVDVLKPLPQLEPQAEVFT(0.0)KEENPES(0.99)DGEPVVEDGT(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S GOLGA4 263236.4 22 9 575.1 268.28 HUMAN 1 0.2065 9.4425 TKEGSEFSFSDGEVA-p Q9BVS4;S335-p TKEGSEFSFSDGEVA 0.0933084416341688 0.00990041263691594 -0.631 0.460666666666667 21.8934377555831 28.1899861741772 -0.631 0.460666666666667 0.00646630558158054 0.00151705519701713 -4.29760368647446 5.89117054226528 Q9BVS4 RIOK2 Q9BVS4.S335.p_RIOK2 Q9BVS4_S335sS337s_2_2_335_337 Q9BVS4 Q9BVS4|Q9BVS4-2 Serine/threonine-protein kinase RIO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22744.22744.3 10.91 8.25 3.878 3 2 2 0 745.9885 2076.0174 S335s S337s TMT10 330 (K) EGSEFsFsDGEVAEK (A) EGS(0.0)EFS(0.99)FS(0.99)DGEVAEK K:TMT10,s:Phosphorylated S RIOK2 63738.3 2 5 1652.1 123.35 HUMAN 1 -21.8934 28.19 TKENVVQSVTSVAEK-p O76070;S51-p TKENVVQSVTSVAEK 0.786231643290655 0.286747276317809 0.0533333333333333 0.139666666666667 2.01508609756639 7.15602028599942 0.0533333333333333 0.139666666666667 0.628769388831686 0.192485478671865 0.512140378531595 1.48787676214494 O76070 SNCG O76070.S51.p_SNCG O76070_S51s _1_1_51_51 O76070 O76070 Gamma-synuclein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18815.18815.3 13.38 13.38 1.205 3 1 1 0 643.3444 1848.0479 S51s TMT10 46 (K) ENVVQsVTSVAEK (T) ENVVQS(0.99)VT(0.0)S(0.0)VAEK K:TMT10,s:Phosphorylated S SNCG 13330.6 2 2 1321.1 154.3 HUMAN 1 2.0151 7.156 TKERTPESEEENVEW-p Q5T200;S137-p TKERTPESEEENVEW 0.522539744732082 0.0176032432582518 -0.224 0.408666666666667 5.21220813147458 24.1694538593421 -0.224 0.408666666666667 0.301147447758794 0.00382872887908217 -1.14280799378192 4.83068419406106 Q5T200 ZC3H13 Q5T200.S137.p_ZC3H13 Q5T200_T134tS137s_2_2_134_137 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25319.25319.5 15.93 15.93 1.204 7 2 2 0 1041.8551 5045.2907 T134t S137s TMT10 132 (K) ERtPEsEEENVEWETNRDDSDNGDINYDYVHELSLEMK (R) ERT(0.99)PES(0.99)EEENVEWET(0.0)NRDDS(0.0)DNGDINY(0.0)DY(0.0)VHELS(0.0)LEMK K:TMT10,t:Phosphorylated T,s:Phosphorylated S ZC3H13 197316.7 3 31 24.1 987.82 HUMAN 1 -5.2122 24.1695 TKFALSLSPGAHQKR-p A0A0A0MST0;S265-p TKFALSLSPGAHQKR 0.043077758776211 0.000952253650599092 -0.816 -2.216 30.3830218804311 62.202822138058 -0.816 -2.216 0.000915583193113706 6.02168157212619e-07 -6.54951057028214 -26.5088532178437 A0A0A0MST0 MYD88 A0A0A0MST0.S265.p_MYD88 A0A0A0MST0_S265s _1_1_265_265 A0A0A0MST0 A0A0A0MST0|A0A0A0MS70|Q99836-6 Myeloid differentiation primary response protein MyD88 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19204.19204.4 15.73 15.73 1.68 2 1 1 0 449.2487 1714.0052 S265s TMT10 260 (K) FALSLsPGAHQK (R) FALS(0.0)LS(0.99)PGAHQK K:TMT10,s:Phosphorylated S MYD88 35956.8 3 1 4876.1 25.55 HUMAN 1 -30.383 -62.2028 TKGEVQVSDKERHTQ-p A0A087X020;S96-p TKGEVQVSDKERHTQ 0.564980049517457 0.0525564196162608 -0.165666666666667 0.377 4.5676722026704 17.0678522959397 -0.165666666666667 0.377 0.349327503153291 0.019643314518858 -1.02420024571234 3.27350402817068 A0A087X020 NotFound A0A087X020.S96.p_NotFound A0A087X020_S96s _1_1_96_96 A0A087X020 Q9Y3A5|A0A087X020 Ribosome maturation protein SBDS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7036.7036.3 7.86 7.86 99 1 1 1 0 562.2946 1604.9008 S96s TMT10 91 (K) GEVQVsDKER (H) GEVQVS(1.0)DKER K:TMT10,s:Phosphorylated S SBDS 29149.4 1 1 3987.1 39.67 HUMAN 1 -4.5677 17.0679 TKGGRRRTWDDDYVL-p A0A087X2H1;T1764-p TKGGRRRTWDDDYVL 0.0444873405743474 0.00111131906301753 -0.711333333333333 -1.12666666666667 30.0546596252802 49.6474939990036 -0.711333333333333 -1.12666666666667 0.000987493026665956 1.08455255074641e-05 -6.44877112697413 -15.4545836069688 A0A087X2H1 NotFound A0A087X2H1.T1764.p_NotFound A0A087X2H1_T1764t _1_1_1764_1764 A0A087X2H1 A0A087X2H1|Q9ULT8 E3 ubiquitin-protein ligase HECTD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13488.13488.4 11.91 8.51 7.076 2 1 1 0 502.0131 1925.0645 T1764t TMT10 1762 (R) RRtWDDDYVLK (R) RRT(0.99)WDDDY(0.0)VLK K:TMT10,t:Phosphorylated T HECTD1 292594.4 3 15 365.1 342.23 HUMAN 1 -30.0547 -49.6475 TKGIQDNSPQHSVEN-p Q96M89;S469-p TKGIQDNSPQHSVEN 0.971185861810661 0.0394452008770915 -0.00566666666666668 -0.491666666666667 0.248497683568031 18.8361027398717 -0.00566666666666669 -0.491666666666667 0.944387503392834 0.0130734354232451 -0.0730540536660387 -3.63035005869087 Q96M89 CCDC138 Q96M89.S469.p_CCDC138 Q96M89_S469s _1_1_469_469 Q96M89 Q96M89|Q96M89-2 Coiled-coil domain-containing protein 138 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7793.7793.4 17.48 17.48 7.531 2 1 1 0 637.0898 2465.3715 S469s TMT10 464 (K) GIQDNsPQHSVENKPK (T) GIQDNS(0.99)PQHS(0.0)VENKPK K:TMT10,s:Phosphorylated S CCDC138 76958.9 1 4 2970.1 64.38 HUMAN 1 -0.2485 -18.8361 TKHGALGSPLRLEGC-p Q86SR1;S481-p TKHGALGSPLRLEGC 0.102562191990377 0.00319556274031381 -0.423333333333333 -0.627 20.9211431153819 37.4424905348464 -0.423333333333333 -0.627391946980297 0.00808882963417994 0.000180198406638862 -4.079485932884 -9.03843412803373 Q86SR1 GALNT10 Q86SR1.S481.p_GALNT10 Q86SR1_S481s _1_1_481_481 Q86SR1 Q86SR1|Q86SR1-2|Q86SR1-4 Polypeptide N-acetylgalactosaminyltransferase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13545.13545.3 11.61 8.85 99 1 1 1 0 644.3345 1851.0221 S481s TMT10 476 (K) HGALGsPLRLEGCVR (G) HGALGS(1.0)PLRLEGCVR C:Carbamidomethylation,s:Phosphorylated S GALNT10 69732.2 1 1 6447.1 11.61 HUMAN 1 -20.9211 -37.4425 TKHIGLVYSGMGPDY-p P25787;Y76-p TKHIGLVYSGMGPDY 0.400124584561269 0.563111430617564 0.166333333333333 0.0806666666666667 7.33963706065794 3.36072126756256 0.166333333333333 0.0806666666666667 0.184516961332455 0.461240966224765 1.52034363384265 0.792653937328003 P25787 PSMA2 P25787.Y76.p_PSMA2 P25787_Y76y _1_1_76_76 P25787 P25787 Proteasome subunit alpha type-2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.19405.19405.3 21.66 21.66 6.342 3 1 1 0 625.3008 1793.9206 Y76y TMT10 71 (K) HIGLVySGMGPDYR (V) HIGLVY(0.99)S(0.0)GMGPDY(0.0)R y:Phosphorylated Y PSMA2 26012.2 1 2 68.1 34.64 HUMAN 1 7.3396 3.3607 TKHKRVHTGEKPYKC-p B7Z6K7;T823-p TKHKRVHTGEKPYKC 0.338303322331957 0.00159168462790637 -0.191 -1.17033333333333 8.75755630609809 44.797297096195 -0.191 -1.17033333333333 0.133120325047687 3.31337270576629e-05 -1.76639560155981 -12.5148638209781 B7Z6K7 ZNF814 B7Z6K7.T823.p_ZNF814 B7Z6K7_T823t _1_1_823_823 B7Z6K7 P17040|P17040-3|P59923|Q9UJW7|Q9UJW7-2|Q9UJU3|Q9UJU3-2|Q8NHY6|B7Z6K7|Q9Y2L8|A0A087WVZ7|Q9HCG1|Q6ZN19|Q9NYT6|Q86WZ6|M0QZI7|Q08AN1|Q86WZ6-2|Q14586|Q14590|Q14590-2|P17035|A0A1W2PQ69|Q9NZL3|P52740|Q9UK10|Q14588|Q8N8Z8|P17020|Q02386|Q9H7R5-2|Q76KX8|A6NK53|Q08AG5|P17035-2|Q86YE8|Q76KX8-2|Q0VGE8|Q8N8Z8-2|P35789|Q86YE8-3|Q9UL59|Q09FC8|K7ENM7|K7EIK6|P35789-2|Q96NJ3|P52740-2|P0C7X5|Q9P2F9|Q86YE8-4|Q86YE8-2|A0A087WWD1|Q3KP31|Q14593|Q09FC8-6|P17022|P17022-2|Q3KP31-2|Q09FC8-2|Q09FC8-5|Q09FC8-4|Q8N8E2|P35789-3|Q9NV72|Q7L2R6|Q5VIY5|Q14593-2|P0CJ79|Q9UK12-2|Q9UK11|Q8N8E2-2|Q5VIY5-2|Q9NV72-2|Q96NJ3-2|B4DX44|Q6U7Q0|A0A1W2PPT3|P17028|A0A1W2PNY2|Q6AZW8|Q09FC8-3|Q8N3J9|Q8N8E2-3 Putative uncharacterized zinc finger protein 814 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7246.7246.4 12.44 12.44 9.538 2 1 1 0 457.2604 1746.0517 T823t TMT10 821 (R) VHtGEKPYK (C) VHT(0.99)GEKPY(0.0)K K:TMT10,t:Phosphorylated T ZNF814 100644.8 2 1 3243.2 56.13 HUMAN 1 -8.7576 -44.7973 TKHMRQPSPIVPALQ-p Q1MSJ5;S882-p TKHMRQPSPIVPALQ 0.260301692650828 0.0622732205682774 -0.163 -0.216333333333333 11.0895925782594 16.0470634545483 -0.163 -0.216333333333333 0.0778109543879523 0.0248481267971469 -2.17181267149658 -3.07505143431328 Q1MSJ5 CSPP1 Q1MSJ5.S882.p_CSPP1 Q1MSJ5_S882s _1_1_882_882 Q1MSJ5 Q1MSJ5|Q1MSJ5-1|Q1MSJ5-2 Centrosome and spindle pole-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19844.19844.3 12.7 12.7 99 1 1 1 0 610.6826 1750.0627 S882s TMT10 880 (R) QPsPIVPALQNK (I) QPS(1.0)PIVPALQNK K:TMT10,s:Phosphorylated S CSPP1 145804.7 4 4 1677.1 121.74 HUMAN 1 -11.0896 -16.0471 TKHSRVHSGERPFHC-p Q96K58;S387-p TKHSRVHSGERPFHC 0.328899771672509 0.0122060462402088 -0.162 -0.437333333333333 9.02732634393166 26.7153226042333 -0.162 -0.437333333333333 0.125102896673536 0.0021304323081042 -1.81309339103708 -5.48428497221837 Q96K58 ZNF668 Q96K58.S387.p_ZNF668 Q96K58_S387s _1_1_387_387 Q96K58 Q96K58-2 Zinc finger protein 668 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.4650.4650.4 9.74 9.74 99 1 1 1 0 574.2731 2214.1061 S387s TMT10 385 (R) VHsGERPFHCNACGK (S) VHS(1.0)GERPFHCNACGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF668 69942.9 1 2 3617.1 46.83 HUMAN 1 -9.0273 -26.7153 TKIKSEPSSPRLASS-p Q8WW38;S475-p TKIKSEPSSPRLASS 0.338303322331957 0.030879695719171 0.151 0.280333333333333 8.76219498081811 20.4121348955529 0.151 0.280333333333333 0.13297821589031 0.00909466089327783 1.76719856042062 3.96415514758201 Q8WW38 ZFPM2 Q8WW38.S475.p_ZFPM2 Q8WW38_S475sS476s_2_2_475_476 Q8WW38 Q8WW38|Q8WW38-2|E7ET52 Zinc finger protein ZFPM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7941.7941.3 7.75 7.75 2.19 3 2 2 0 540.2729 1458.868 S475s S476s TMT10 470 (K) IKSEPssPR (L) IKS(0.0)EPS(0.99)S(0.99)PR K:TMT10,s:Phosphorylated S ZFPM2 130381.7 4 11 1154.1 171.84 HUMAN 1 8.7622 20.4121 TKIPCKSSPELEDTA-p P46013;S2828-p TKIPCKSSPELEDTA 0.486305536183135 0.951743722276382 -0.191 -0.00733333333333328 5.76885754227668 0.305919671340586 -0.191 -0.00733333333333328 0.264919694632218 0.931983090698729 -1.24327588937055 -0.0893873645170038 P46013 MKI67 P46013.S2828.p_MKI67 P46013_S2828s _1_1_2828_2828 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15105.15105.4 13.7 13.7 1.123 6 1 1 0 655.0901 2537.3736 S2828s TMT10 2823 (K) IPCKSsPELEDTATSSK (R) IPCKS(0.0)S(0.99)PELEDT(0.0)AT(0.0)S(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MKI67 360912.4 9 93 5.1 1918.46 HUMAN 1 -5.7689 -0.3059 TKIPLIKSHNDFVAI-p O43741;S108-p TKIPLIKSHNDFVAI 0.233628206047255 0.0343367356372218 -0.442666666666667 0.283333333333333 12.1141947703005 19.7293702464339 -0.442666666666667 0.283333333333333 0.0614582971579938 0.0106429733665999 -2.35260604797891 3.81759878526775 O43741 PRKAB2 O43741.S108.p_PRKAB2 O43741_S108s _1_1_108_108 O43741 O43741 5'-AMP-activated protein kinase subunit beta-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29080.29080.5 26.81 22.3 20.283 2 1 1 0 709.5911 3463.9556 S108s TMT10 103 (K) IPLIKsHNDFVAILDLPEGEHQYK (F) IPLIKS(0.99)HNDFVAILDLPEGEHQY(0.0)K K:TMT10,s:Phosphorylated S PRKAB2 30415.8 5 3 1446.1 140.95 HUMAN 1 -12.1142 19.7294 TKITKPGSIDSNNQL-p Q04637-9;S1084-p TKITKPGSIDSNNQL 0.175973502111451 0.4802593745218 0.308 0.083 15.0012773935225 4.25101997234933 0.308 0.083 0.0316134767391265 0.375749146490067 2.87869075172829 0.96464735757636 Q04637 EIF4G1 Q04637.9.S1084.p_EIF4G1 Q04637-9_S1084s _1_1_1084_1084 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1|Q04637-4|E7EX73|Q04637-5|Q04637-7 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19375.19375.4 12.17 12.17 1.195 3 1 1 0 628.336 2430.3505 S1084s TMT10 1079 (K) ITKPGsIDSNNQLFAPGGR (L) IT(0.0)KPGS(0.99)IDS(0.0)NNQLFAPGGR K:TMT10,s:Phosphorylated S EIF4G1 176975.4 3 17 107.1 585.61 HUMAN 1 15.0013 4.251 TKKAESSSDEEEESE-p Q8WWQ0;S881-p TKKAESSSDEEEESE 0.455145758341492 0.253553591125318 -0.139833333333333 0.113 6.30559090904999 7.84879683914835 -0.139833333333333 0.113 0.234121290376864 0.164104434191225 -1.33882477705057 1.60841982176911 Q8WWQ0 PHIP Q8WWQ0.S881.p_PHIP Q8WWQ0_S880sS881s_2_2_880_881 Q8WWQ0 Q8WWQ0 PH-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7900.7900.3 8.72 8.72 8.715 4 2 2 0 811.0299 2271.1443 S880s S881s TMT10 876 (K) KAESssDEEEESEK (Q) KAES(0.0)S(0.99)S(0.99)DEEEES(0.0)EK K:TMT10,s:Phosphorylated S PHIP 208454.1 1 28 108.1 577.05 HUMAN 2 -6.3056 7.8488 TKKASAISIKLGSSK-p Q8WW12;S87-p TKKASAISIKLGSSK 0.554720459620056 0.0509038139829833 0.133333333333333 -0.365666666666667 4.72578384919361 17.2709117911788 0.133333333333333 -0.365666666666667 0.336838414980818 0.0187460089864505 1.05355818897186 -3.31360971781837 Q8WW12 PCNP Q8WW12.S87.p_PCNP Q8WW12_S87s _1_1_87_87 Q8WW12 Q8WW12|Q8WW12-2 PEST proteolytic signal-containing nuclear protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12776.12776.3 9.76 9.76 3.426 2 1 1 0 528.9951 1505.003 S87s TMT10 82 (K) KASAIsIK (L) KAS(0.0)AIS(0.99)IK K:TMT10,s:Phosphorylated S PCNP 18924.5 2 5 1455.1 140.6 HUMAN 1 4.7258 -17.2709 TKKDDSHSAEDSEDE-p Q9H1E3;S75-p TKKDDSHSAEDSEDE 0.309222647686921 0.00304280184189834 -0.317666666666667 0.742 9.53000728858437 37.8151885000222 -0.317666666666667 0.742 0.111429266351895 0.000165379300242176 -1.90015911911817 9.19078216506385 Q9H1E3 NUCKS1 Q9H1E3.S75.p_NUCKS1 Q9H1E3_S75s _1_1_75_75 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4144.4144.5 18.09 18.09 2.24 4 1 1 0 711.9622 3475.8161 S75s TMT10 68 (K) TKKDDSHsAEDSEDEKEDHK (N) T(0.0)KKDDS(0.0)HS(0.99)AEDS(0.0)EDEKEDHK K:TMT10,s:Phosphorylated S NUCKS1 27295.9 5 8 48.1 767.83 HUMAN 1 -9.53 37.8152 TKKILCKSPQSDPAD-p P46013;S1861-p TKKILCKSPQSDPAD 0.278485430498237 0.00205530259496525 -0.166666666666667 -0.795333333333333 10.5027818424021 41.8329251197445 -0.166666666666667 -0.795333333333333 0.0890680236485877 6.55703479142127e-05 -2.06921254021509 -10.9873127966348 P46013 MKI67 P46013.S1861.p_MKI67 P46013_S1861s _1_1_1861_1861 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12904.12904.5 13.98 13.98 1.174 5 1 1 0 620.3406 3017.7111 S1861s TMT10 1856 (K) KILCKsPQSDPADTPTNTK (Q) KILCKS(0.99)PQS(0.0)DPADT(0.0)PT(0.0)NT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MKI67 360912.4 7 60 5.1 1918.46 HUMAN 1 -10.5028 -41.8329 TKKPITKSSPSLLIE-p Q6ZNL6;S632-p TKKPITKSSPSLLIE 0.300478673172259 0.273701536699094 -0.202 -0.115666666666667 9.81093027451877 7.41297214630119 -0.202 -0.115666666666667 0.104449646032969 0.181427361793798 -1.94888053672797 -1.53267676630906 Q6ZNL6 FGD5 Q6ZNL6.S632.p_FGD5 Q6ZNL6_S632s _1_1_632_632 Q6ZNL6 Q6ZNL6|B7ZM68 FYVE, RhoGEF and PH domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20300.20300.3 17.05 17.05 1.124 5 1 1 0 671.6782 1933.053 S632s TMT10 632 (K) sSPSLLIESDSPDK (Y) S(0.99)S(0.0)PS(0.0)LLIES(0.0)DS(0.0)PDK K:TMT10,s:Phosphorylated S FGD5 161828 3 5 1305.1 156.12 HUMAN 1 -9.8109 -7.413 TKKQAVGSPRKIQKE-p Q149N8-2;S419-p TKKQAVGSPRKIQKE 0.883145119381001 0.0112052838025084 0.027 -0.691666666666667 1.06561782185305 27.3077554242088 0.027 -0.691666666666667 0.782416891508859 0.00185876487730653 0.290257933509526 -5.64511466746134 Q149N8 SHPRH Q149N8.2.S419.p_SHPRH Q149N8-2_S419s _1_1_419_419 Q149N8-2 A0A0D9SFM0|Q149N8|Q149N8-4|Q149N8-2|K4DI94 Isoform 2 of E3 ubiquitin-protein ligase SHPRH HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5024.5024.4 8.46 5.89 99 1 1 1 0 435.2637 1658.068 S419s TMT10 414 (K) KQAVGsPRK (I) KQAVGS(1.0)PRK K:TMT10,s:Phosphorylated S SHPRH 109051 5 2 4136.1 36.86 HUMAN 1 1.0656 -27.3078 TKKRKLESTESRSSF-p P02545;S423-p TKKRKLESTESRSSF 0.0663964789343382 0.0177911419244713 -0.899333333333333 -0.362333333333333 25.3911318184549 24.1053804687756 -0.899333333333334 -0.362333333333333 0.00288992663803752 0.00388563455905886 -5.14352543227095 -4.8149761963581 P02545 LMNA P02545.S423.p_LMNA P02545_S423s _1_1_423_423 P02545 P02545|P02545-3|P02545-6|P02545-4|P02545-2|P02545-5|Q5TCI8|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3949.3949.2 9.09 5.62 1.14 3 1 1 0 629.8162 1178.6578 S423s Hydrogen 420 (R) KLEsTESR (S) KLES(0.99)T(0.0)ES(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S LMNA 74423.5 5 24 60.1 706.83 HUMAN 1 -25.3911 -24.1054 TKKVAVATPAKKAAV-p P19338;T76-p TKKVAVATPAKKAAV 0.205048524137417 0.00232985334139993 -0.204666666666667 -0.972 13.3094638646901 40.520193040785 -0.204666666666667 -0.972 0.0466716992838885 8.87116579465352e-05 -2.56698307298753 -10.3678335437291 P19338 NCL P19338.T76.p_NCL P19338_T76t _1_1_76_76 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9887.9887.3 14.45 14.45 99 1 1 1 0 670.4281 1929.3031 T76t TMT10 71 (K) KVAVAtPAKK (A) KVAVAT(1.0)PAKK K:TMT10,t:Phosphorylated T NCL 76670.1 11 2 114.1 570.88 HUMAN 1 -13.3095 -40.5202 TKLARVDSEGDFSEN-p O43823;S323-p TKLARVDSEGDFSEN 0.812521070407363 0.0174017151144664 0.0365 0.337166666666667 1.73541683354614 24.246968336861 0.0365 0.337166666666667 0.670591920555647 0.00376099855283695 0.449376890001905 4.84973383989772 O43823 AKAP8 O43823.S323.p_AKAP8 O43823_S323sS328s_2_2_323_328 O43823 O43823 A-kinase anchor protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17999.17999.4 20.31 20.31 13.606 4 2 2 0 1062.1617 4085.69 S323s S328s Hydrogen 321 (R) VDsEGDFsENDDAAGDFRSGDEEFKGEDELCDSGR (Q) VDS(0.99)EGDFS(0.99)ENDDAAGDFRS(0.0)GDEEFKGEDELCDS(0.0)GR K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S AKAP8 76677.5 13 9 923.1 199.94 HUMAN 2 1.7354 24.247 TKLHCPPSPHLENPP-p Q8IZD2;S1444-p TKLHCPPSPHLENPP 0.915262614364166 0.0858702103173813 0.0193333333333333 -0.192 0.753759141854215 14.1114333350142 0.0193333333333333 -0.192 0.840667166654351 0.0388022282919026 0.210917328781165 -2.71175841306943 Q8IZD2 KMT2E Q8IZD2.S1444.p_KMT2E Q8IZD2_S1444s _1_1_1444_1444 Q8IZD2 Q8IZD2|Q8IZD2-7|Q8IZD2-2|Q8IZD2-5 Histone-lysine N-methyltransferase 2E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11211.11211.3 14.78 14.78 99 1 1 1 0 721.0394 2081.1366 S1444s TMT10 1439 (K) LHCPPsPHLENPPK (S) LHCPPS(1.0)PHLENPPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2E 207015.2 4 12 544.1 275.86 HUMAN 1 0.7538 -14.1114 TKLKNRHSLEISSAL-p O75592;S3052-p TKLKNRHSLEISSAL 0.0626849711829956 0.00929166830878165 -0.432333333333333 -0.464 26.1436447299873 28.6882219418368 -0.432333333333333 -0.464 0.00243016368654524 0.00135262623264048 -5.33938121344371 -6.033712572823 O75592 MYCBP2 O75592.S3052.p_MYCBP2 O75592_S3052s _1_1_3052_3052 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25278.25278.4 22.58 22.58 1.214 4 1 1 0 822.4244 3206.7145 S3052s TMT10 3049 (K) NRHsLEISSALNMFNIAPHGPDISK (M) NRHS(0.99)LEIS(0.0)S(0.0)ALNMFNIAPHGPDIS(0.0)K K:TMT10,s:Phosphorylated S MYCBP2 518176.7 1 18 252.1 405.77 HUMAN 1 -26.1436 -28.6882 TKLKPPRTPPPPSRK-p Q8IVT5;T288-p TKLKPPRTPPPPSRK 0.265747257066887 0.00674880763851583 0.251333333333333 -0.47 10.908618020514 31.1709944022017 0.251333333333333 -0.47 0.081121915689193 0.000763660908449147 2.14010754161851 -6.7851543450466 Q8IVT5 KSR1 Q8IVT5.T288.p_KSR1 Q8IVT5_T288t _1_1_288_288 Q8IVT5 Q8IVT5|Q8IVT5-2|A0A0A0MQW1|Q8IVT5-3|Q8IVT5-4 Kinase suppressor of Ras 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8337.8337.4 11.98 11.98 5.741 2 1 1 0 471.0277 1801.1212 T288t TMT10 283 (K) LKPPRtPPPPSR (K) LKPPRT(0.99)PPPPS(0.0)R K:TMT10,t:Phosphorylated T KSR1 103356.3 1 1 3797.1 42.93 HUMAN 1 10.9086 -31.171 TKLKRQKSFSEDVIS-p F6QMI7;S1922-p TKLKRQKSFSEDVIS 0.217359173580377 0.250441300337034 -0.241666666666667 0.139 12.7686816595023 7.9235899627452 -0.241666666666667 0.139 0.0528605690499674 0.161302464800507 -2.46946695065749 1.62139390048119 F6QMI7 DST F6QMI7.S1922.p_DST F6QMI7_S1922s _1_1_1922_1922 F6QMI7 Q03001|F8W9J4|F6QMI7|E9PHM6|Q03001-14|Q03001-8|Q03001-10 Dystonin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15927.15927.3 13.89 7.12 1.769 3 1 1 0 710.0325 2048.1177 S1922s TMT10 1922 (K) sFSEDVISHKGDLR (Y) S(0.99)FS(0.0)EDVIS(0.0)HKGDLR K:TMT10,s:Phosphorylated S DST 636850.7 7 5 796.2 223.72 HUMAN 1 -12.7687 7.9236 TKLLRPLSPVTPPPP-p E7EWN3;S871-p TKLLRPLSPVTPPPP 0.842829623897369 0.582942681813655 0.031 -0.0866666666666666 1.4367776167101 3.16409560189346 0.031 -0.0866666666666666 0.718327078756072 0.482603469529279 0.380115189797858 -0.753440255306091 E7EWN3 SETD5 E7EWN3.S871.p_SETD5 E7EWN3_S871s _1_1_871_871 E7EWN3 E7EWN3|Q9C0A6|Q9C0A6-3|Q9C0A6-2 SET domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20645.20645.3 15.15 15.15 1.832 4 1 1 0 799.1206 2315.3851 S871s TMT10 866 (K) LLRPLsPVTPPPPNSGSK (S) LLRPLS(0.99)PVT(0.0)PPPPNS(0.0)GS(0.0)K K:TMT10,s:Phosphorylated S SETD5 161030.5 3 9 773.1 227.48 HUMAN 1 1.4368 -3.1641 TKLMHNASDSEVDQD-p Q9H2P0;S953-p TKLMHNASDSEVDQD 0.627462341450442 0.185570197245711 -0.110666666666667 0.300333333333333 3.76295456608338 9.6196238107042 -0.110666666666667 0.300333333333333 0.420440499516331 0.109153488196382 -0.871538011214238 1.91495360708337 Q9H2P0 ADNP Q9H2P0.S953.p_ADNP Q9H2P0_S953s _1_1_953_953 Q9H2P0 Q9H2P0 Activity-dependent neuroprotector homeobox protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20996.20996.3 21.22 21.22 1.164 2 1 1 0 919.095 2675.3023 S953s TMT10 948 (K) LMHNAsDSEVDQDDVVEWK (D) LMHNAS(0.99)DS(0.0)EVDQDDVVEWK K:TMT10,s:Phosphorylated S ADNP 124930 3 12 276.1 391.38 HUMAN 1 -3.763 9.6196 TKLNVSKSV______-p O60503;S1352-p TKLNVSKSV______ 0.0144448951231044 0.000952253650599092 -1.61766666666667 -2.59166666666667 44.0153158677765 65.9802395576237 -1.61766666666667 -2.59166666666667 3.96705674985391e-05 2.52334158066256e-07 -12.1254466215522 -31.149809618437 O60503 ADCY9 O60503.S1352.p_ADCY9 O60503_S1352s _1_1_1352_1352 O60503 O60503 Adenylate cyclase type 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15940.15940.2 7.4 7.4 1.478 2 1 1 0 642.8701 1204.7665 S1352s TMT10 1347 (K) LNVSKsV (-) LNVS(0.0)KS(0.99)V K:TMT10,s:Phosphorylated S ADCY9 152923.1 1 16 658.1 252.1 HUMAN 1 -44.0153 -65.9802 TKLQKAQSFDVASVP-p Q15811;S203-p TKLQKAQSFDVASVP 0.367954276833438 0.092214868216397 -0.154 -0.182666666666667 8.05247804160287 13.6928353050016 -0.154 -0.182666666666667 0.156585735235335 0.0427283841492099 -1.64426295322441 -2.63515473442078 Q15811 ITSN1 Q15811.S203.p_ITSN1 Q15811_S203s _1_1_203_203 Q15811 Q15811|Q15811-8|Q15811-9|Q15811-4|Q15811-2|Q15811-5|Q15811-6|Q15811-13|A8CTZ0|D6PAW0 Intersectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30374.30579.3 22.53 22.53 3.748 4 1 1 0 879.7692 2557.3248 S203s TMT10 201 (K) AQsFDVASVPPVAEWAVPQSSR (L) AQS(0.99)FDVAS(0.0)VPPVAEWAVPQS(0.0)S(0.0)R s:Phosphorylated S ITSN1 196273.9 3 1 790.1 224.94 HUMAN 1 -8.0525 -13.6928 TKLQRFNSYDISRDT-p Q6IQ26;S193-p TKLQRFNSYDISRDT 0.79601330764711 0.951682975662987 0.0456666666666667 -0.0133333333333333 1.91463846871211 0.306399272530679 0.0456666666666667 -0.0133333333333333 0.643481629812767 0.931880175387008 0.489814021182546 -0.0895230431891852 Q6IQ26 DENND5A Q6IQ26.S193.p_DENND5A Q6IQ26_S193s _1_1_193_193 Q6IQ26 Q6IQ26|Q6IQ26-2|B4DFB6 DENN domain-containing protein 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18467.18467.3 12.85 8.89 3.153 6 1 1 0 706.3452 2037.049 S193s Hydrogen 191 (R) FNsYDISRDTLYVSK (C) FNS(0.99)Y(0.0)DIS(0.0)RDT(0.0)LY(0.0)VS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S DENND5A 148633.4 1 1 2138.1 96.07 HUMAN 1 1.9146 -0.3064 TKLRRSISASDLTFK-p Q5T9S5;S1355-p TKLRRSISASDLTFK 0.0690182417121105 0.0168024029770629 -0.412 -0.354666666666667 25.0318719354872 24.494151061932 -0.412 -0.354666666666667 0.00313915533500899 0.00355291562389017 -5.05185349021669 -4.91082286554563 Q5T9S5 CCDC18 Q5T9S5.S1355.p_CCDC18 Q5T9S5_S1355s _1_1_1355_1355 Q5T9S5 Q5T9S5 Coiled-coil domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23192.23192.2 14.94 9.75 2.27 4 1 1 0 803.9286 1526.883 S1355s TMT10 1353 (R) SIsASDLTFK (I) S(0.0)IS(0.99)AS(0.0)DLT(0.0)FK K:TMT10,s:Phosphorylated S CCDC18 170100.5 2 1 5405.1 19.62 HUMAN 1 -25.0319 -24.4942 TKLSSLNSQELTLSN-p Q9BQF6-5;S307-p TKLSSLNSQELTLSN 0.980114284326491 0.0956449226255385 0.00399999999999999 0.214 0.173010449585708 13.4796216545734 0.00399999999999999 0.214 0.960945937387683 0.0448784485102127 0.0512750602335073 2.59637420546643 Q9BQF6 SENP7 Q9BQF6.5.S307.p_SENP7 Q9BQF6-5_S307s _1_1_307_307 Q9BQF6-5 Q9BQF6|Q9BQF6-2|J3QT09|Q9BQF6-5|Q9BQF6-4 Isoform 5 of Sentrin-specific protease 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23521.23521.3 13.23 13.23 3.065 6 1 1 0 748.7349 2164.2225 S307s TMT10 302 (K) LSSLNsQELTLSNATK (S) LS(0.0)S(0.0)LNS(0.99)QELT(0.0)LS(0.0)NAT(0.0)K K:TMT10,s:Phosphorylated S SENP7 113127.1 1 7 1683.1 121.31 HUMAN 1 0.173 13.4796 TKLTRIPSAKKYKDI-p Q15121-2;S125-p TKLTRIPSAKKYKDI 0.232670986778867 0.138433161882489 0.437 -0.735333333333333 12.169879888948 11.3122843336103 0.437 -0.735333333333334 0.0606753110079543 0.073921635440477 2.36250325286294 -2.20988291647096 Q15121 PEA15 Q15121.2.S125.p_PEA15 Q15121-2_S125s _1_1_125_125 Q15121-2 Q15121-2 Isoform 2 of Astrocytic phosphoprotein PEA-15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19545.19545.5 15.29 15.29 2.208 4 1 1 0 634.7642 3089.8228 S125s TMT10 110 (K) ISEEDELDTKLTRIPsAKK (Y) IS(0.0)EEDELDT(0.0)KLT(0.0)RIPS(0.99)AKK K:TMT10,s:Phosphorylated S PEA15 17420.4 13 3 1203.1 166.92 HUMAN 1 12.1699 -11.3123 TKLTRRLSQRPTAEE-p Q9C0D0;S467-p TKLTRRLSQRPTAEE 0.866081613861063 0.949548981775588 0.0313333333333333 0.00966666666666667 1.21487718105468 0.321962643557819 0.0313333333333333 0.00966666666666668 0.755983439329374 0.92854666742829 0.326942301468418 0.0939188532026997 Q9C0D0 PHACTR1 Q9C0D0.S467.p_PHACTR1 Q9C0D0_S467s _1_1_467_467 Q9C0D0 Q9C0D0|Q9C0D0-2|Q4VY12|Q4VY13 Phosphatase and actin regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7800.7800.3 9.14 3.91 7.25 2 1 1 0 674.6824 1942.0668 S467s TMT10 465 (R) RLsQRPTAEELEQR (N) RLS(0.99)QRPT(0.0)AEELEQR s:Phosphorylated S PHACTR1 66763.3 2 11 638.1 255.38 HUMAN 1 1.2149 0.322 TKMFLYLSDLSRKDR-p Q9NXL6-2;S427-p TKMFLYLSDLSRKDR 0.291886077992564 0.878225815180859 0.217666666666667 -0.019 10.0854158177932 0.791946515049677 0.217666666666667 -0.019 0.098052442894223 0.833307611058454 1.99655409717644 -0.220822889083745 Q9NXL6 SIDT1 Q9NXL6.2.S427.p_SIDT1 Q9NXL6-2_S427s _1_1_427_427 Q9NXL6-2 Q9NXL6-2 Isoform 2 of SID1 transmembrane family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.32157.32157.2 13.13 13.13 2.367 3 1 1 0 777.3865 1473.7973 S427s TMT10 422 (K) MFLYLsDLSR (K) MFLY(0.0)LS(0.99)DLS(0.0)R s:Phosphorylated S SIDT1 95324.4 1 2 2968.1 64.47 HUMAN 1 10.0854 -0.7919 TKMFRDNSAMRKHLH-p P25490;S311-p TKMFRDNSAMRKHLH 0.167853660719156 0.093663852468239 -0.266333333333333 -0.397666666666667 15.4733306453465 13.6013958281212 -0.266333333333333 -0.397666666666667 0.0283574343591783 0.0436375558026524 -2.96770514227474 -2.61850406803096 P25490 YY1 P25490.S311.p_YY1 P25490_S311s _1_1_311_311 P25490 P25490 Transcriptional repressor protein YY1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9604.9604.3 9.28 9.28 99 1 1 1 0 479.5511 1356.6714 S311s TMT10 306 (K) MFRDNsAMR (K) MFRDNS(1.0)AMR s:Phosphorylated S YY1 45168.2 2 5 1217.1 165.22 HUMAN 1 -15.4733 -13.6014 TKMPCESSPPESADT-p P46013;S1376-p TKMPCESSPPESADT 0.256105749737423 0.95663986161203 0.247 -0.00799999999999999 11.2376839006838 0.276092163002978 0.247 -0.008 0.0752023842595845 0.938406016815396 2.19780300899692 -0.0809234122934284 P46013 MKI67 P46013.S1376.p_MKI67 P46013_S1376s _1_1_1376_1376 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9579.9579.3 11.59 11.59 1.124 9 1 1 0 940.1051 2738.3377 S1376s TMT10 1368 (K) TTKMPCESsPPESADTPTSTR (R) T(0.0)T(0.0)KMPCES(0.0)S(0.99)PPES(0.0)ADT(0.0)PT(0.0)S(0.0)T(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MKI67 360912.4 7 43 5.1 1918.46 HUMAN 1 11.2377 -0.2761 TKNATAGSDRQVIPA-p Q8N8R7;S183-p TKNATAGSDRQVIPA 0.635427624475813 0.881838511318206 0.0653333333333333 0.016 3.6719128690641 0.766505365929322 0.0653333333333333 0.016 0.429347277223629 0.838203487390563 0.853871834031925 0.214217130661619 Q8N8R7 ARL14EP Q8N8R7.S183.p_ARL14EP Q8N8R7_S183s _1_1_183_183 Q8N8R7 Q8N8R7 ARL14 effector protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9770.9770.3 14.57 14.57 2.244 2 1 1 0 656.0221 1886.086 S183s TMT10 178 (K) NATAGsDRQVIPAK (S) NAT(0.0)AGS(0.99)DRQVIPAK K:TMT10,s:Phosphorylated S ARL14EP 30249.9 2 1 6025.1 14.57 HUMAN 1 3.6719 0.7665 TKNFSLLSFGEEAEE-p Q6UX04;S206-p TKNFSLLSFGEEAEE 0.58471981560589 0.00815813217337322 0.137 0.464 4.28651886478069 29.74168462112 0.137 0.464 0.372690320588174 0.00106128380710994 0.971516849700111 6.34397215003787 Q6UX04 CWC27 Q6UX04.S206.p_CWC27 Q6UX04_S206s _1_1_206_206 Q6UX04 Q6UX04|Q6UX04-2|D6REK3 Peptidyl-prolyl cis-trans isomerase CWC27 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34931.34931.5 18.07 18.07 3.166 4 1 1 0 711.938 3475.6939 S206s TMT10 201 (K) NFSLLsFGEEAEEEEEEVNRVSQSMK (G) NFS(0.0)LLS(0.99)FGEEAEEEEEEVNRVS(0.0)QS(0.0)MK K:TMT10,s:Phosphorylated S CWC27 54017.3 3 1 3229.1 56.56 HUMAN 1 4.2865 29.7417 TKPARAGSEVEWTED-p O14523;S330-p TKPARAGSEVEWTED 0.980699778242646 0.873745247041024 -0.00466666666666666 0.0243333333333334 0.168226262570943 0.825222159140982 -0.00466666666666667 0.0243333333333333 0.962005098490216 0.826947205801614 -0.0498830749186079 0.229421639774272 O14523 C2CD2L O14523.S330.p_C2CD2L O14523_S330s _1_1_330_330 O14523 O14523-2|E9PK05 Phospholipid transfer protein C2CD2L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.31452.31452.3 20.34 20.34 7.398 3 1 1 0 828.0608 2402.2037 S330s TMT10 328 (R) AGsEVEWTEDLALDLGPQSR (E) AGS(0.99)EVEWT(0.0)EDLALDLGPQS(0.0)R s:Phosphorylated S C2CD2L 76636.4 1 3 411.1 322.51 HUMAN 1 -0.1682 0.8252 TKPDVYKSPASDTYI-p E9PAV3;S1977-p TKPDVYKSPASDTYI 0.2090070665774 0.0341210582437446 -0.429333333333333 -0.410333333333333 13.1197585194335 19.7672439157312 -0.429333333333333 -0.410333333333333 0.0487555598881868 0.0105505623517842 -2.53266933039595 -3.82564875575758 E9PAV3 NACA E9PAV3.S1977.p_NACA E9PAV3_S1977s _1_1_1977_1977 E9PAV3 E9PAV3|E9PAV3-2|Q13765|F8VZJ2 Nascent polypeptide-associated complex subunit alpha, muscle-specific form HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.33496.33496.5 20.94 20.94 1.125 6 1 1 0 803.2516 3932.2595 S1977s TMT10 1964 (K) NILFVITKPDVYKsPASDTYIVFGEAK (I) NILFVIT(0.0)KPDVY(0.0)KS(0.99)PAS(0.0)DT(0.0)Y(0.0)IVFGEAK K:TMT10,s:Phosphorylated S NACA 206102.3 3 13 533.1 279.72 HUMAN 1 -13.1198 -19.7672 TKPGSIDSNNQLFAP-p Q04637-9;S1087-p TKPGSIDSNNQLFAP 0.688853550964718 0.0456921667392721 -0.064 -0.349333333333333 3.03764221606983 17.9316438469672 -0.064 -0.349333333333333 0.496861994524901 0.0161003610546181 -0.728047540536849 -3.44563717208401 Q04637 EIF4G1 Q04637.9.S1087.p_EIF4G1 Q04637-9_S1087s _1_1_1087_1087 Q04637-9 Q04637-9|Q04637-8|Q04637-7|Q04637-6 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19462.19462.3 17.05 17.05 4.289 3 1 1 0 837.4438 2430.3505 S1087s TMT10 1079 (K) ITKPGSIDsNNQLFAPGGR (L) IT(0.0)KPGS(0.0)IDS(0.99)NNQLFAPGGR K:TMT10,s:Phosphorylated S EIF4G1 176975.4 1 18 107.1 585.61 HUMAN 1 -3.0376 -17.9316 TKPKSDESDEDTF__-p Q9BS91;S419-p TKPKSDESDEDTF__ 0.212591466402957 0.204156783983212 0.215333333333333 -0.169666666666667 12.9782662491517 9.07789511037944 0.215333333333333 -0.169666666666667 0.0503701651838565 0.123654660372536 2.50715135387076 -1.82118655226679 Q9BS91 SLC35A5 Q9BS91.S419.p_SLC35A5 Q9BS91_S419s _1_1_419_419 Q9BS91 Q9BS91 Probable UDP-sugar transporter protein SLC35A5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10983.10983.3 7.96 7.96 1.261 4 1 1 0 717.3511 2070.0643 S419s Hydrogen 411 (R) LTKPKSDEsDEDTF (-) LT(0.0)KPKS(0.0)DES(0.99)DEDT(0.0)F K:TMT10-Lys-Only,s:Phosphorylated S SLC35A5 49127.1 4 2 4445.1 31.33 HUMAN 1 12.9783 -9.0779 TKPKSPCT_______-p O43684;T328-p TKPKSPCT_______ 0.247049795569645 0.0451790072100615 0.298333333333333 0.247666666666667 11.5946562710839 17.9991992486604 0.298333333333334 0.247666666666667 0.0692682750688619 0.0158518544170805 2.26063727907807 3.45927137977074 O43684 BUB3 O43684.T328.p_BUB3 O43684_T328t _1_1_328_328 O43684 O43684 Mitotic checkpoint protein BUB3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8817.8817.3 12.68 12.68 2.466 4 1 1 0 777.0735 2249.2414 T328t TMT10 315 (R) QVTDAETKPKSPCt (-) QVT(0.0)DAET(0.0)KPKS(0.0)PCT(0.99) K:TMT10,C:Carbamidomethylation,t:Phosphorylated T BUB3 37610.5 2 4 3162.1 58.97 HUMAN 1 11.5947 17.9992 TKPPRPDSPATTPNI-p P32519;S187-p TKPPRPDSPATTPNI 0.166553758928775 0.00548343072381473 0.237666666666667 0.581 15.5686604899636 32.7995550031693 0.237666666666667 0.581 0.0277417562164005 0.000524861237037491 2.98579991995814 7.31818568029698 P32519 ELF1 P32519.S187.p_ELF1 P32519_S187s _1_1_187_187 P32519 P32519|P32519-2 ETS-related transcription factor Elf-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11710.11710.4 14.97 10.55 1.583 5 1 1 0 758.4405 2950.7859 S187s TMT10 180 (K) TKPPRPDsPATTPNISVKK (K) T(0.0)KPPRPDS(0.99)PAT(0.0)T(0.0)PNIS(0.0)VKK K:TMT10,s:Phosphorylated S ELF1 67725 10 3 1950.1 105.53 HUMAN 1 15.5687 32.7996 TKPTLPPSPLMAARR-p B1AHC4;S634-p TKPTLPPSPLMAARR 0.952606731320845 0.322470190948865 0.00933333333333332 -0.121333333333333 0.41642708163072 6.4986785670025 0.00933333333333333 -0.121333333333333 0.908567696762861 0.223940242056004 0.12032432368524 -1.37258904311632 B1AHC4 NotFound B1AHC4.S634.p_NotFound B1AHC4_S634s _1_1_634_634 B1AHC4 B1AHC4|B1AHC3|P85298|P85298-3|P85298-4 PRR5-ARHGAP8 readthrough HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21088.21503.4 15.29 15.29 7.001 5 1 1 0 648.1123 2509.4576 S634s TMT10 621 (R) TQATGLTKPTLPPsPLMAAR (R) T(0.0)QAT(0.0)GLT(0.0)KPT(0.0)LPPS(0.99)PLMAAR K:TMT10,s:Phosphorylated S PRR5-ARHGAP8 73209.5 10 1 2028.2 101.7 HUMAN 1 0.4164 -6.4987 TKQFSDASQLDFVKT-p Q8TEW0;S840-p TKQFSDASQLDFVKT 0.0734347857517839 0.00916734196128833 -0.539 -0.422333333333333 24.3488490511671 28.8168724915565 -0.539 -0.422333333333333 0.00367379648995896 0.00131314520099225 -4.88072826950266 -6.07094958742579 Q8TEW0 PARD3 Q8TEW0.S840.p_PARD3 Q8TEW0_S837sS840s_2_2_837_840 Q8TEW0 Q8TEW0|Q8TEW0-2 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.26613.26613.3 9.3 9.87 99 2 2 2 0 668.3175 1843.0002 S837s S840s TMT10 835 (K) QFsDAsQLDFVK (T) QFS(1.0)DAS(1.0)QLDFVK K:TMT10,s:Phosphorylated S PARD3 151933.9 1 26 65.1 692.2 HUMAN 1 -24.3488 -28.8169 TKQPPRSSPNTVKRP-p P11229;S322-p TKQPPRSSPNTVKRP 0.375072477437412 0.00266411370065118 -0.200333333333333 0.9 7.88491551641501 39.1280060546797 -0.200333333333333 0.9 0.162745297428172 0.000122236074513367 -1.61519000029825 9.74598319349794 P11229 CHRM1 P11229.S322.p_CHRM1 P11229_S322s _1_1_322_322 P11229 P11229|P11229-2 Muscarinic acetylcholine receptor M1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5605.5605.3 10.45 5.91 1.401 3 1 1 0 583.6539 1668.9797 S322s TMT10 317 (K) QPPRSsPNTVK (R) QPPRS(0.0)S(0.99)PNT(0.0)VK K:TMT10,s:Phosphorylated S CHRM1 52275.8 1 1 6631.1 10.45 HUMAN 1 -7.8849 39.128 TKQQLKASLGKVGVK-p P46013;S1028-p TKQQLKASLGKVGVK 0.206108312152609 0.00248947575194659 -0.253666666666667 -0.957 13.2654159138587 39.8283647401234 -0.253666666666667 -0.957 0.0471474717122653 0.000104031180329794 -2.55900526843078 -10.0544279141081 P46013 MKI67 P46013.S1028.p_MKI67 P46013_S1028s _1_1_1028_1028 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12124.12124.3 10.48 10.48 99 1 1 1 0 580.6854 1660.0725 S1028s TMT10 1023 (K) QQLKAsLGK (V) QQLKAS(1.0)LGK K:TMT10,s:Phosphorylated S MKI67 360912.4 1 22 5.1 1918.46 HUMAN 1 -13.2654 -39.8284 TKQSMDMSPIKIVKN-p Q14562;S460-p TKQSMDMSPIKIVKN 0.936755359874379 0.556339105729435 0.012 -0.056 0.552344438712705 3.4314003797602 0.012 -0.056 0.880573387422045 0.453795267064669 0.157483671853204 -0.806628626727591 Q14562 DHX8 Q14562.S460.p_DHX8 Q14562_S460s _1_1_460_460 Q14562 Q14562|F5H658 ATP-dependent RNA helicase DHX8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15884.15884.2 11.99 8.07 4.116 2 1 1 0 787.8899 1494.806 S460s TMT10 455 (K) QSMDMsPIK (I) QS(0.0)MDMS(0.99)PIK K:TMT10,s:Phosphorylated S DHX8 140167.9 36 2 4011.1 39.13 HUMAN 1 0.5523 -3.4314 TKQSNASSDVEVEEK-p O75475;S106-p TKQSNASSDVEVEEK 0.238535570822241 0.0169961888261017 -0.299666666666667 0.403666666666667 11.9077412919581 24.417431152682 -0.299666666666667 0.403666666666667 0.0644504376548641 0.00361623699431236 -2.31598109782136 4.89180616752373 O75475 PSIP1 O75475.S106.p_PSIP1 O75475_S106s_1_1_106_106 O75475 O75475|O75475-2|O75475-3 PC4 and SFRS1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10113.10113.2 14.7 14.7 1.101 3 1 1 0 980.9612 1879.9649 N103n S106s TMT10 101 (K) QSnASsDVEVEEK (E) QS(0.0)N(1.0)AS(0.0)S(0.99)DVEVEEK K:TMT10,n:Deamidated,s:Phosphorylated S PSIP1 60216.3 12 2 382.1 334.17 HUMAN 1 -11.9077 24.4174 TKQTARKSTGGKAPR-p Q16695;S11-p TKQTARKSTGGKAPR 0.0466874864502887 0.0745875728714311 0.663 -0.641666666666667 29.5852191688318 14.9654106840374 0.663 -0.641666666666667 0.00110021632094063 0.0318756413424082 6.30691154455914 -2.87009886791007 Q16695 HIST3H3 Q16695.S11.p_HIST3H3 Q16695_S11s _1_1_11_11 Q16695 P84243|P68431|Q71DI3|Q5TEC6|Q16695 Histone H3.1t HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3737.3737.3 8.4 8.4 8.398 2 1 1 0 437.9109 1231.7523 S11s TMT10 11 (K) sTGGKAPR (K) S(0.99)T(0.0)GGKAPR K:TMT10,s:Phosphorylated S HIST3H3 15622.1 1 1 4540.1 30.11 HUMAN 1 29.5852 -14.9654 TKQTLQDSFLLDLKS-p A0AV02-2;S533-p TKQTLQDSFLLDLKS 0.21671898036419 0.0173863532684528 -0.317333333333333 -0.372333333333333 12.7954853372762 24.2544352703376 -0.317333333333333 -0.372333333333333 0.0525353302002082 0.00375453772982652 -2.47427896029565 -4.85157157830758 A0AV02 SLC12A8 A0AV02.2.S533.p_SLC12A8 A0AV02-2_S533s _1_1_533_533 A0AV02-2 A0AV02-2|A0AV02-3 Isoform 2 of Solute carrier family 12 member 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.31652.31652.3 10.3 10.3 7.035 2 1 1 0 653.6914 1879.0941 S533s TMT10 528 (K) QTLQDsFLLDLK (S) QT(0.0)LQDS(0.99)FLLDLK K:TMT10,s:Phosphorylated S SLC12A8 82733.5 1 2 3701.1 44.92 HUMAN 1 -12.7955 -24.2544 TKRFSTYSQSPPDTP-p Q6ZS17-4;S365-p TKRFSTYSQSPPDTP 0.512156146242886 0.247657090964233 0.125666666666667 -0.174 5.37178533460854 7.98687913559458 0.125666666666667 -0.174 0.290282908953659 0.158968869742075 1.17177437776257 -1.63236789662048 Q6ZS17 FAM65A Q6ZS17.4.S365.p_FAM65A Q6ZS17-4_S365sS367s_2_2_365_367 Q6ZS17-4 Q6ZS17-4 Isoform 4 of Rho family-interacting cell polarization regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19993.19993.3 11.79 11.79 3.698 7 2 2 0 691.304 1911.965 S365s S367s TMT10 361 (R) FSTYsQsPPDTPSLR (E) FS(0.0)T(0.0)Y(0.0)S(0.99)QS(0.99)PPDT(0.0)PS(0.0)LR s:Phosphorylated S RIPOR1 135393.6 2 9 1530.1 133.82 HUMAN 1 5.3718 -7.9869 TKRKNTGSPDRKPSK-p Q9UIG0;S312-p TKRKNTGSPDRKPSK 0.26937080367531 0.717261744911192 0.276 -0.046 10.801516053919 1.98619752222861 0.276 -0.046 0.0831473466089466 0.632965803855418 2.12137177772846 -0.50568464517802 Q9UIG0 BAZ1B Q9UIG0.S312.p_BAZ1B Q9UIG0_S312s _1_1_312_312 Q9UIG0 Q9UIG0|Q9UIG0-2 Tyrosine-protein kinase BAZ1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.4466.4466.4 9.31 9.31 2.167 3 1 1 0 489.274 1874.1063 S312s TMT10 309 (K) NTGsPDRKPSK (K) NT(0.0)GS(0.99)PDRKPS(0.0)K K:TMT10,s:Phosphorylated S BAZ1B 172497.3 5 4 370.1 339.44 HUMAN 1 10.8015 -1.9862 TKRKRENSLQEDRGS-p P41002;S577-p TKRKRENSLQEDRGS 0.00886207961121239 0.00262293931700471 -1.17833333333333 -1.63333333333333 49.6558216607373 39.2871140467462 -1.17833333333333 -1.63333333333333 1.0824748975894e-05 0.000117838877076222 -15.5076807657958 -9.81529066370858 P41002 CCNF P41002.S577.p_CCNF P41002_S577s _1_1_577_577 P41002 P41002 Cyclin-F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4405.4405.2 8.83 5.19 99 1 1 1 0 650.2913 1219.6116 S577s TMT10 575 (R) ENsLQEDR (G) ENS(1.0)LQEDR s:Phosphorylated S CCNF 89464 1 1 2951.1 64.9 HUMAN 1 -49.6558 -39.2871 TKRKRVLSPEELEDR-p Q86WJ1;S636-p TKRKRVLSPEELEDR 0.879685039296077 0.160792440489696 -0.026 0.183 1.0955363033025 10.4400764120168 -0.026 0.183 0.777045356781671 0.0903633574586064 -0.297673956971399 2.05740777573062 Q86WJ1 CHD1L Q86WJ1.S636.p_CHD1L Q86WJ1_S636s _1_1_636_636 Q86WJ1 Q86WJ1|Q86WJ1-2|A0A0A0MSH9|Q86WJ1-4 Chromodomain-helicase-DNA-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16908.16908.3 11.83 5.84 99 1 1 1 0 661.0192 1901.0744 S636s TMT10 634 (R) VLsPEELEDRQK (K) VLS(1.0)PEELEDRQK K:TMT10,s:Phosphorylated S CHD1L 101552.7 3 2 2854.1 68.03 HUMAN 1 -1.0955 10.4401 TKRPRSSTVTEAPIA-p Q8TD19;T333-p TKRPRSSTVTEAPIA 0.169563643937022 0.213449044394002 -0.412333333333333 0.147 15.3729846479335 8.82384549851983 -0.412333333333333 0.147 0.0290202757786689 0.131103851438307 -2.94870188972809 1.77724452985706 Q8TD19 NEK9 Q8TD19.T333.p_NEK9 Q8TD19_T333t _1_1_333_333 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19748.19748.2 13.85 9.39 1.393 6 1 1 0 913.9773 1746.9799 T333t TMT10 331 (R) SStVTEAPIAVVTSR (T) S(0.0)S(0.0)T(0.99)VT(0.0)EAPIAVVT(0.0)S(0.0)R t:Phosphorylated T NEK9 108935.2 1 6 224.1 425.83 HUMAN 1 -15.373 8.8238 TKRTGYESGEYEMLG-p Q13561;S83-p TKRTGYESGEYEMLG 0.182722695333724 0.725422343780879 -0.278333333333333 -0.046 14.5161685907777 1.9186712482286 -0.278333333333333 -0.046 0.035349489061447 0.64288438182254 -2.78819109962997 -0.49065878910652 Q13561 DCTN2 Q13561.S83.p_DCTN2 Q13561_S83s _1_1_83_83 Q13561 Q13561-2|Q13561-3|F8W1I6 Dynactin subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25535.25535.2 14.05 14.05 1.408 4 1 1 0 1114.5077 2148.0368 S83s Hydrogen 79 (R) TGYEsGEYEMLGEGLGVK (E) T(0.0)GY(0.0)ES(0.99)GEY(0.0)EMLGEGLGVK K:TMT10-Lys-Only,s:Phosphorylated S DCTN2 44344.3 10 3 1016.1 188.09 HUMAN 1 -14.5162 -1.9187 TKSIKRPSPAEKSHN-p B5MBZ0;S176-p TKSIKRPSPAEKSHN 0.492572262872537 0.108010238239583 0.131 -0.237333333333333 5.66349818325494 12.7701119600768 0.131 -0.237333333333333 0.271425209477225 0.0528431628758808 1.22437820933898 -2.46839790320049 B5MBZ0 EML4 B5MBZ0.S176.p_EML4 B5MBZ0_S176s _1_1_176_176 B5MBZ0 B5MBZ0|Q9HC35|Q9HC35-2 Echinoderm microtubule-associated protein-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.6853.6853.4 9.68 6.84 3.413 2 1 1 0 470.7805 1800.131 S176s TMT10 171 (K) SIKRPsPAEK (S) S(0.0)IKRPS(0.99)PAEK K:TMT10,s:Phosphorylated S EML4 111259.7 3 6 586.1 265.11 HUMAN 1 5.6635 -12.7701 TKSIYTRSVIDPVPA-p Q13177;S197-p TKSIYTRSVIDPVPA 0.343164410890753 0.440519896015042 0.182 -0.088 8.62571111097394 4.74247889667463 0.182 -0.088 0.137223625353528 0.335546034240431 1.74357193486307 -1.05644319882244 Q13177 PAK2 Q13177.S197.p_PAK2 Q13177_S197s _1_1_197_197 Q13177 Q13177 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16480.16480.3 21.3 21.3 11.233 2 1 1 0 747.3801 2160.1498 S197s Hydrogen 197 (R) sVIDPVPAPVGDSHVDGAAK (S) S(0.99)VIDPVPAPVGDS(0.0)HVDGAAK K:TMT10-Lys-Only,s:Phosphorylated S PAK2 58326.8 3 27 272.1 393.22 HUMAN 1 8.6257 -4.7425 TKSKTVYSILRHVAE-p P05198;S110-p TKSKTVYSILRHVAE 0.918270347484031 0.0660840635677049 0.0273333333333333 0.211333333333333 0.723083971933711 15.6923565454919 0.0273333333333333 0.211333333333333 0.846626002380313 0.0269627599657821 0.20289781363197 3.00726542577944 P05198 EIF2S1 P05198.S110.p_EIF2S1 P05198_S110s _1_1_110_110 P05198 P05198 Eukaryotic translation initiation factor 2 subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22817.22817.2 10.53 3.01 3.949 3 1 1 0 580.8176 1080.6615 S110s TMT10 107 (K) TVYsILR (H) T(0.0)VY(0.0)S(0.99)ILR s:Phosphorylated S EIF2S1 36396.8 1 1 2415.1 84.49 HUMAN 1 0.7231 15.6924 TKSLDNNYSTPNERG-p O60716;Y904-p TKSLDNNYSTPNERG 0.847701864429328 0.182601339482823 -0.257 0.282333333333333 1.38854910735594 9.71493597293125 -0.257 0.282333333333333 0.726348575712175 0.106784053535837 -0.36868963737835 1.93146876131687 O60716 CTNND1 O60716.Y904.p_CTNND1 O60716_Y904y _1_1_904_904 O60716 O60716-21|O60716-25|O60716-26|O60716-27|O60716-29|O60716-11|O60716-13|O60716-17|O60716-18|O60716-19|O60716-10|O60716-3|C9JZR2|O60716-5|O60716-9 Catenin delta-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8297.8336.2 10.88 6.17 1.213 4 1 1 0 859.885 1638.7921 Y904y TMT10 899 (K) SLDNNySTPNER (G) S(0.0)LDNNY(0.99)S(0.0)T(0.0)PNER y:Phosphorylated Y CTNND1 108738.6 2 4 51.1 43.85 HUMAN 1 -1.3885 9.7149 TKSLLDASEEAIKKD-p P18206-2;S726-p TKSLLDASEEAIKKD 0.0520154613962689 0.00949153116870816 -0.523333333333333 0.433666666666667 27.9484214762051 28.5398441710512 -0.523333333333333 0.433666666666667 0.00160382822585961 0.00139963754198434 -5.8314106049704 5.99098656681557 P18206 VCL P18206.2.S726.p_VCL P18206-2_S726s _1_1_726_726 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19167.19167.3 12.28 12.28 4.608 2 1 1 0 691.061 1991.1992 S726s TMT10 721 (K) SLLDAsEEAIKK (D) S(0.0)LLDAS(0.99)EEAIKK K:TMT10,s:Phosphorylated S VCL 117290.9 1 15 319.1 365.38 HUMAN 1 -27.9484 28.5398 TKSLPSRSPPITPNW-p P26045;S372-p TKSLPSRSPPITPNW 0.963163243411043 0.147835222929035 -0.00800000000000002 -0.155666666666667 0.312652079400285 10.9302394184065 -0.00800000000000002 -0.154151138342849 0.930539455123069 0.0807190530121494 -0.0912991640125565 -2.14293323656094 P26045 PTPN3 P26045.S372.p_PTPN3 P26045_S372s _1_1_372_372 P26045 P26045|J3KN34|P26045-2 Tyrosine-protein phosphatase non-receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16346.16346.3 14.07 11.46 1.574 4 1 1 0 639.6701 1837.0282 S372s TMT10 367 (K) SLPSRsPPITPNWR (S) S(0.0)LPS(0.0)RS(0.99)PPIT(0.0)PNWR s:Phosphorylated S PTPN3 105129.1 2 2 1253.1 161.68 HUMAN 1 -0.3127 -10.9302 TKSLTNPTPIQQQLR-p Q9UJF2-2;T761-p TKSLTNPTPIQQQLR 0.506525965314695 0.0793573798360612 0.109333333333333 -0.213333333333333 5.45083040347745 14.6008386402357 0.109333333333333 -0.213333333333333 0.285047318363679 0.0346669900626598 1.18607118754103 -2.80214883085394 Q9UJF2 RASAL2 Q9UJF2.2.T761.p_RASAL2 Q9UJF2-2_T761t _1_1_761_761 Q9UJF2-2 Q9UJF2-2 Isoform 2 of Ras GTPase-activating protein nGAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15810.15810.3 14.02 14.02 4.819 3 1 1 0 602.3222 1724.9856 T761t TMT10 756 (K) SLTNPtPIQQQLR (R) S(0.0)LT(0.0)NPT(0.99)PIQQQLR t:Phosphorylated T RASAL2 145265.6 4 34 281.2 388.28 HUMAN 1 5.4508 -14.6008 TKSQIPLSKIKTLFP-p P13010;S531-p TKSQIPLSKIKTLFP 0.928994885751495 0.0334733135328065 0.0153333333333333 0.269666666666667 0.634990647085682 19.8880527747702 0.0153333333333333 0.269666666666667 0.863974521327643 0.0102611189597009 0.179634688297671 3.85138819512082 P13010 XRCC5 P13010.S531.p_XRCC5 P13010_S531s _1_1_531_531 P13010 P13010 X-ray repair cross-complementing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14209.14209.2 7.22 2.47 4.998 2 1 1 0 655.8792 1230.7822 S531s TMT10 526 (K) SQIPLsK (I) S(0.0)QIPLS(0.99)K K:TMT10,s:Phosphorylated S XRCC5 83273.6 1 7 1948.1 105.79 HUMAN 1 0.635 19.8881 TKSSKSSTPVPSKQS-p Q9H8V3;T444-p TKSSKSSTPVPSKQS 0.204124866753728 0.0140449661692756 -0.225 -0.56 13.3593423980055 25.692359343402 -0.225 -0.56 0.0461387431843479 0.00269627425952288 -2.5760246276371 -5.2145500070072 Q9H8V3 ECT2 Q9H8V3.T444.p_ECT2 Q9H8V3_T444t _1_1_444_444 Q9H8V3 Q9H8V3-3|Q9H8V3-4|Q9H8V3-2 Protein ECT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7535.7535.2 10.84 6.05 2.262 4 1 1 0 670.865 1260.7564 T444t TMT10 442 (K) SStPVPSK (Q) S(0.0)S(0.0)T(0.99)PVPS(0.0)K K:TMT10,t:Phosphorylated T ECT2 104530 4 11 572.1 269.2 HUMAN 1 -13.3593 -25.6924 TKSSRRNSEGSELSC-p Q5T5U3;S1668-p TKSSRRNSEGSELSC 0.284595187898323 0.552490958955186 0.305333333333333 0.0633333333333333 10.298830950498 3.46997267290138 0.305333333333333 0.0633333333333334 0.0933505551360071 0.44978268505062 2.03367880033852 0.814229273247267 Q5T5U3 ARHGAP21 Q5T5U3.S1668.p_ARHGAP21 Q5T5U3_S1668s _1_1_1668_1668 Q5T5U3 Q5T5U3|A0A087WW76 Rho GTPase-activating protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13597.13597.4 14.57 14.57 1.242 9 1 1 0 710.0785 2757.3271 S1668s TMT10 1666 (R) RNsEGSELSCTEGSLTSSLDSRR (Q) RNS(0.99)EGS(0.0)ELS(0.0)CT(0.0)EGS(0.0)LT(0.0)S(0.0)S(0.0)LDS(0.0)RR C:Carbamidomethylation,s:Phosphorylated S ARHGAP21 218696.3 3 23 148.1 512.52 HUMAN 1 10.2988 3.47 TKSTFAGSPERESIH-p Q2TBE0;S479-p TKSTFAGSPERESIH 0.562019350876014 0.710023965775972 0.081 -0.0363333333333333 4.60630234588427 2.04604301302536 0.081 -0.0363333333333333 0.346234041682731 0.62430339793228 1.03139015244069 -0.518913860652866 Q2TBE0 CWF19L2 Q2TBE0.S479.p_CWF19L2 Q2TBE0_S479s _1_1_479_479 Q2TBE0 Q2TBE0|Q2TBE0-2|Q2TBE0-3 CWF19-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19515.19527.3 19.36 19.36 3.051 5 1 1 0 914.1389 2660.4296 S479s TMT10 474 (K) STFAGsPERESIHILSVDEK (N) S(0.0)T(0.0)FAGS(0.99)PERES(0.0)IHILS(0.0)VDEK K:TMT10,s:Phosphorylated S CWF19L2 104355.7 6 2 3735.1 44.24 HUMAN 1 4.6063 -2.046 TKSVYTRSVIEPLPV-p Q13153-2;S204-p TKSVYTRSVIEPLPV 0.689296686018885 0.136126020428918 0.0656666666666667 -0.184666666666667 3.03184382759296 11.4119982117856 0.0656666666666667 -0.184666666666667 0.497525812070721 0.0722437329901004 0.726872749778282 -2.22740406485558 Q13153 PAK1 Q13153.2.S204.p_PAK1 Q13153-2_S204s _1_1_204_204 Q13153-2 Q13153-2|B3KNX7|E9PM17 Isoform 2 of Serine/threonine-protein kinase PAK 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19705.19705.3 9.17 9.17 1.224 6 1 1 0 742.0684 2144.2277 S204s TMT10 199 (K) SVYTRsVIEPLPVTPTR (D) S(0.0)VY(0.0)T(0.0)RS(0.99)VIEPLPVT(0.0)PT(0.0)R s:Phosphorylated S PAK1 62087.3 1 6 272.2 393.22 HUMAN 1 3.0318 -11.412 TKTFLTLSLQDMASR-p Q9UNS2;S318-p TKTFLTLSLQDMASR 0.788195837750741 0.516746931250503 0.0443333333333333 0.0963333333333333 1.99200884214129 3.84985661823769 0.0443333333333333 0.0963333333333333 0.632119395022604 0.412111124668292 0.507031613155242 0.888172212897438 Q9UNS2 COPS3 Q9UNS2.S318.p_COPS3 Q9UNS2_S318s _1_1_318_318 Q9UNS2 Q9UNS2|Q9UNS2-2|H7C3P9 COP9 signalosome complex subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29493.29493.3 13.84 13.84 2.792 4 1 1 0 597.9696 1711.925 S318s TMT10 313 (K) TFLTLsLQDMASR (V) T(0.0)FLT(0.0)LS(0.99)LQDMAS(0.0)R s:Phosphorylated S COPS3 48442.8 2 1 4666.1 28.21 HUMAN 1 1.992 3.8499 TKTITYESPQTVKGG-p Q6ZSX4;S137-p TKTITYESPQTVKGG 0.984096222666884 0.788583851448936 0.00666666666666665 -0.03 0.139762991299527 1.43273771927612 0.00666666666666662 -0.03 0.968330699792103 0.718995592402257 0.0415720282018424 -0.379120958004087 Q6ZSX4 NotFound Q6ZSX4.S137.p_NotFound Q6ZSX4_S137s _1_1_137_137 Q6ZSX4 Q6ZSX4 Band 4.1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14443.14443.3 8.35 8.35 2.819 5 1 1 0 602.3202 1724.9835 S137s TMT10 132 (K) TITYEsPQTVK (G) T(0.0)IT(0.0)Y(0.0)ES(0.99)PQT(0.0)VK K:TMT10,s:Phosphorylated S EPB41L2 22785.9 1 34 469.5 302.69 HUMAN 1 0.1398 -1.4327 TKTQRIASHSHVKGL-p Q9Y265;S17-p TKTQRIASHSHVKGL 0.196737017122856 0.79956065074023 -0.209666666666667 -0.0463333333333333 13.7602521519962 1.35836838380889 -0.209666666666667 -0.0463333333333333 0.0420702201645455 0.731413819298389 -2.64900495674767 -0.361465980214488 Q9Y265 RUVBL1 Q9Y265.S17.p_RUVBL1 Q9Y265_S17s _1_1_17_17 Q9Y265 Q9Y265|Q9Y265-2 RuvB-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.5263.5263.3 8.02 8.02 1.128 2 1 1 0 472.9297 1336.8101 S17s TMT10 15 (R) IAsHSHVK (G) IAS(0.99)HS(0.0)HVK K:TMT10,s:Phosphorylated S RUVBL1 50569.4 1 1 3456.1 50.49 HUMAN 1 -13.7603 -1.3584 TKTTGITTPVASVAF-p Q8IWI9-4;T1668-p TKTTGITTPVASVAF 0.529276501737613 0.0108788508013424 -0.0886666666666667 -0.436666666666667 5.11270107362075 27.5119910522953 -0.0886666666666667 -0.436666666666667 0.308127097253727 0.0017733762781996 -1.12467162319362 -5.70136929805486 Q8IWI9 MGA Q8IWI9.4.T1668.p_MGA Q8IWI9-4_T1668t _1_1_1668_1668 Q8IWI9-4 Q8IWI9-4 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24423.24423.3 10.25 10.25 1.113 5 1 1 0 676.713 1948.1519 T1668t TMT10 1663 (K) TTGITtPVASVAFPK (S) T(0.0)T(0.0)GIT(0.0)T(0.99)PVAS(0.0)VAFPK K:TMT10,t:Phosphorylated T MGA 338321.5 1 15 141.1 523.06 HUMAN 1 -5.1127 -27.512 TKTYRMRSEPDDSDP-p F5H4R6;S237-p TKTYRMRSEPDDSDP 0.386484719697648 0.628145385991348 -0.117666666666667 -0.123333333333333 7.64192640631177 2.74559507516348 -0.117666666666667 -0.123333333333333 0.17211049726216 0.53142317831862 -1.57297552528347 -0.668159208864029 F5H4R6 NAP1L1 F5H4R6.S237.p_NAP1L1 F5H4R6_S237s _1_1_237_237 F5H4R6 P55209|F5H4R6|F8W0J6|P55209-2|B7Z9C2|F8W543|F8VV59|P55209-3|B7Z4K9 Nucleosome assembly protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27209.27209.5 27.91 27.91 1.101 4 1 1 0 855.3956 4192.9691 S237s TMT10 235 (R) MRsEPDDSDPFSFDGPEIMGCTGCQIDWKK (G) MRS(0.99)EPDDS(0.0)DPFS(0.0)FDGPEIMGCT(0.0)GCQIDWKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NAP1L1 44911.2 3 6 836.1 215.14 HUMAN 1 -7.6419 -2.7456 TKVALNVSCANLLDK-p O75131;S14-p TKVALNVSCANLLDK 0.973184341125227 0.0511673143510278 -0.00533333333333333 0.263666666666667 0.230741806740441 17.2347685503539 -0.00533333333333333 0.263666666666667 0.948256480324735 0.0189026696697355 -0.0679620384403292 3.30645534529324 O75131 CPNE3 O75131.S14.p_CPNE3 O75131_S14s _1_1_14_14 O75131 O75131 Copine-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.26654.26654.2 17.88 10.47 99 1 1 1 0 978.025 1875.0774 S14s TMT10 9 (K) VALNVsCANLLDK (D) VALNVS(1.0)CANLLDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CPNE3 60985.3 3 1 1209.1 166.69 HUMAN 1 -0.2307 17.2348 TKVFMTDSMLELLEC-p Q96H55;S748-p TKVFMTDSMLELLEC 0.652883195845465 0.118351256140902 0.12 0.461666666666667 3.47221284646334 12.2209385578215 0.12 0.461666666666667 0.449550738410965 0.0599661468856582 0.814795231475545 2.37037688553468 Q96H55 MYO19 Q96H55.S748.p_MYO19 Q96H55_S748s _1_1_748_748 Q96H55 Q96H55|Q96H55-4 Unconventional myosin-XIX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.36161.36161.3 14.94 14.94 2.308 2 1 1 0 703.9934 2029.9958 S748s TMT10 743 (K) VFMTDsMLELLECGR (A) VFMT(0.0)DS(0.99)MLELLECGR C:Carbamidomethylation,s:Phosphorylated S MYO19 110844.7 2 2 3149.1 59.18 HUMAN 1 3.4722 12.2209 TKVNLAHSEI_____-p Q9BXS4;S321-p TKVNLAHSEI_____ 0.543838740550732 0.704019392428412 0.106333333333333 0.0373333333333334 4.8840734814504 2.09409326579516 0.106333333333333 0.0373333333333334 0.324782523484692 0.617434188359096 1.08277052345828 0.529477734372488 Q9BXS4 TMEM59 Q9BXS4.S321.p_TMEM59 Q9BXS4_S321s _1_1_321_321 Q9BXS4 Q9BXS4|Q5T6Z8 Transmembrane protein 59 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14569.14569.2 9.96 9.96 99 1 1 1 0 596.3022 1111.6309 S321s TMT10 316 (K) VNLAHsEI (-) VNLAHS(1.0)EI s:Phosphorylated S TMEM59 36907.4 1 2 5412.1 19.58 HUMAN 1 4.8841 2.0941 TKVQKSWSFNDRTRF-p Q9NR82-2;S457-p TKVQKSWSFNDRTRF 0.945256167031154 0.0704347276970444 -0.02 -0.384666666666667 0.480296778663983 15.3211532149239 -0.02 -0.384666666666667 0.895303582161155 0.0293686969923028 -0.137902813189157 -2.93693654650552 Q9NR82 KCNQ5 Q9NR82.2.S457.p_KCNQ5 Q9NR82-2_S457s _1_1_457_457 Q9NR82-2 Q9NR82-6|A0A0A0MRC8|Q9NR82-3|A0A0A0MSD9|Q9NR82-7|F8WEA4|Q9NR82-2|A0A0A0MSC0|P56696 Isoform 2 of Potassium voltage-gated channel subfamily KQT member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15107.15107.2 9.95 4.71 2.925 2 1 1 0 610.769 1140.5635 S457s TMT10 455 (K) SWsFNDR (T) S(0.0)WS(0.99)FNDR s:Phosphorylated S KCNQ5 102286.2 1 4 2456.1 82.72 HUMAN 1 -0.4803 -15.3212 TKVSKSPSPASTSTV-p Q659A1;S418-p TKVSKSPSPASTSTV 0.890046614604404 0.42473345072548 0.0213333333333333 -0.097 0.987771348793323 4.94964651318526 0.0213333333333333 -0.097 0.796568017098515 0.319915548906757 0.270808179936232 -1.09460307800507 Q659A1 ICE2 Q659A1.S418.p_ICE2 Q659A1_S418s _1_1_418_418 Q659A1 Q659A1 Little elongation complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.16701.16701.3 16.74 14.83 1.115 8 1 1 0 865.7647 2515.3114 S418s TMT10 416 (K) SPsPASTSTVPNMTDAPTAPK (A) S(0.0)PS(0.99)PAS(0.0)T(0.0)S(0.0)T(0.0)VPNMT(0.0)DAPT(0.0)APK K:TMT10,s:Phosphorylated S ICE2 111036.5 5 4 1160.1 171.12 HUMAN 1 0.9878 -4.9496 TKVSRHASSSPESPK-p Q9UQ35;S435-p TKVSRHASSSPESPK 0.267086807703558 0.264425494415324 -0.167333333333333 0.202 10.8640516216758 7.60986400220948 -0.167333333333333 0.202 0.0819586578547323 0.173385829206702 -2.13230895606533 1.56692830279741 Q9UQ35 SRRM2 Q9UQ35.S435.p_SRRM2 Q9UQ35_S435sS436sS437s_3_3_435_437 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5795.5795.3 9.54 9.54 9.541 5 3 3 0 865.72 2355.257 S435s S436s S437s TMT10 433 (R) HAsssPESPKPAPAPGSHR (E) HAS(0.99)S(0.99)S(0.99)PES(0.0)PKPAPAPGS(0.0)HR K:TMT10,s:Phosphorylated S SRRM2 300351.7 5 250 2.1 3310.34 HUMAN 1 -10.8641 7.6099 TKVTFSVSPIEATEK-p Q9ULD2;S443-p TKVTFSVSPIEATEK 0.15698322903478 0.123292326871871 -0.271333333333333 -0.176666666666667 16.130301689353 11.9915369082896 -0.271333333333333 -0.176666666666667 0.0243764147796617 0.0632188089137424 -3.0932497040934 -2.32967211420603 Q9ULD2 MTUS1 Q9ULD2.S443.p_MTUS1 Q9ULD2_S443s _1_1_443_443 Q9ULD2 Q9ULD2|Q9ULD2-2|Q9ULD2-5 Microtubule-associated tumor suppressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25004.25004.2 16.83 14.08 2.654 4 1 1 0 973.519 1866.0625 S443s TMT10 438 (K) VTFSVsPIEATEK (C) VT(0.0)FS(0.0)VS(0.99)PIEAT(0.0)EK K:TMT10,s:Phosphorylated S MTUS1 142763.7 2 2 645.1 254.81 HUMAN 1 -16.1303 -11.9915 TLAELDSSESEEETL-p Q08AE8;S465-p TLAELDSSESEEETL 0.813083216141779 0.76172764838597 0.033 -0.031 1.72525658687033 1.63325584415985 0.033 -0.031 0.672162595691552 0.686553547573385 0.447060287912829 -0.425913654992112 Q08AE8 SPIRE1 Q08AE8.S465.p_SPIRE1 Q08AE8_S464sS465sS467s_3_3_464_467 Q08AE8 Q08AE8|Q08AE8-2|Q08AE8-5|Q08AE8-3|J3KNG6|Q08AE8-4 Protein spire homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22857.22857.3 13.45 13.45 3.35 5 3 3 0 928.7427 2544.3081 S464s S465s S467s TMT10 456 (R) APTLAELDssEsEEETLHK (S) APT(0.0)LAELDS(0.99)S(0.99)ES(0.99)EEET(0.0)LHK K:TMT10,s:Phosphorylated S SPIRE1 86683.2 4 8 1694.1 120.62 HUMAN 1 1.7253 -1.6333 TLAELPGSPPEKCDS-p O95197;S453-p TLAELPGSPPEKCDS 0.103884021690019 0.0300849715605031 0.547 -0.281 20.7554490049224 20.5902871369094 0.547 -0.281 0.00840340122192897 0.00872913653168371 4.04298642527768 -4.00290560153483 O95197 RTN3 O95197.S453.p_RTN3 O95197_S453s _1_1_453_453 O95197 O95197|O95197-2|O95197-7 Reticulon-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21874.21874.4 9.2 9.2 1.161 5 1 1 0 885.4564 3458.8292 S453s TMT10 443 (K) QDDTLAELPGsPPEKCDSLGSGVATVK (V) QDDT(0.0)LAELPGS(0.99)PPEKCDS(0.0)LGS(0.0)GVAT(0.0)VK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RTN3 113236.6 1 5 1374.1 148.87 HUMAN 1 20.7554 -20.5903 TLATLKMSVQPTVSL-p P06748;S82-p TLATLKMSVQPTVSL 0.617306864410826 0.559551112563013 0.0826666666666667 -0.120666666666667 3.88858986366966 3.39909267241215 0.0826666666666667 -0.120666666666667 0.408451987485329 0.457183694408824 0.895772676800103 -0.800248426831734 P06748 NPM1 P06748.S82.p_NPM1 P06748_S82s_1_1_82_82 P06748 P06748|P06748-2|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.34803.34803.3 10.09 10.09 2.488 4 1 1 0 851.4481 2456.3784 M81m S82s TMT10 81 (K) msVQPTVSLGGFEITPPVVLR (L) M(1.0)S(0.99)VQPT(0.0)VS(0.0)LGGFEIT(0.0)PPVVLR m:Oxidized methionine,s:Phosphorylated S NPM1 32745.6 1 5 78.1 640.75 HUMAN 1 3.8886 -3.3991 TLCRKLGSGYFGEVF-p Q13882;S199-p TLCRKLGSGYFGEVF 0.459299895698651 0.652864053683323 -0.140666666666667 0.0653333333333333 6.23086536953643 2.52906251378222 -0.140666666666667 0.0653333333333333 0.238184481877025 0.55859076145946 -1.3255879708495 0.622941820677192 Q13882 PTK6 Q13882.S199.p_PTK6 Q13882_S199s _1_1_199_199 Q13882 Q13882 Protein-tyrosine kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.35158.35158.4 9.51 9.51 3.425 2 1 1 0 646.8502 2504.4156 S199s TMT10 196 (R) KLGsGYFGEVFEGLWK (D) KLGS(0.99)GY(0.0)FGEVFEGLWK K:TMT10,s:Phosphorylated S PTK6 52403.8 1 3 3292.1 54.8 HUMAN 1 -6.2309 2.5291 TLDGEAGSPAGPDVL-p Q5VWQ8;S763-p TLDGEAGSPAGPDVL 0.934377786071211 0.0932089148064195 0.016 -0.190666666666667 0.58034591855547 13.6303071392211 0.016 -0.190666666666667 0.874914084940671 0.0433480220967056 0.16502508214939 -2.6237655411772 Q5VWQ8 DAB2IP Q5VWQ8.S763.p_DAB2IP Q5VWQ8_S763s _1_1_763_763 Q5VWQ8 Q5VWQ8|Q5VWQ8-5|Q5VWQ8-2|Q5VWQ8-4|Q5VWQ8-3 Disabled homolog 2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31660.31660.4 23.21 23.21 1.923 3 1 1 0 867.9314 3388.7335 S763s TMT10 756 (R) TLDGEAGsPAGPDVLPTDGQAAAAQLVAGWPAR (A) T(0.0)LDGEAGS(0.99)PAGPDVLPT(0.0)DGQAAAAQLVAGWPAR s:Phosphorylated S DAB2IP 132592.9 2 12 281.1 388.28 HUMAN 1 0.5803 -13.6303 TLDQLPLTNPEHFGT-p Q4LE39;T126-p TLDQLPLTNPEHFGT 0.0635370415880919 0.105403640676937 0.491 -0.213 25.9114850614209 12.9106980997787 0.491 -0.213 0.00256360726616955 0.0511599592665162 5.2783942723399 -2.49363064979333 Q4LE39 ARID4B Q4LE39.T126.p_ARID4B Q4LE39_T126t _1_1_126_126 Q4LE39 Q4LE39|Q4LE39-2 AT-rich interactive domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25441.25441.4 12.73 12.73 1.793 4 1 1 0 854.6862 3335.7676 T126t TMT10 113 (R) HFAESETLDQLPLtNPEHFGTPVIGK (K) HFAES(0.0)ET(0.0)LDQLPLT(0.99)NPEHFGT(0.0)PVIGK K:TMT10,t:Phosphorylated T ARID4B 148890.9 1 2 191.1 463.89 HUMAN 1 25.9115 -12.9107 TLDTDDRSEQEGSTL-p O43299;S267-p TLDTDDRSEQEGSTL 0.280984027319846 0.925851577372474 -0.188 -0.0123333333333333 10.424704820017 0.472486627500251 -0.188 -0.0123333333333333 0.0906837598157758 0.896915103336654 -2.05560258515717 -0.135751934155279 O43299 AP5Z1 O43299.S267.p_AP5Z1 O43299_S267s _1_1_267_267 O43299 O43299|O43299-2|O43299-3 AP-5 complex subunit zeta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23998.23998.4 29.88 29.88 1.111 11 1 1 0 1049.2548 4114.0162 S267s TMT10 248 (R) AWLLHSGPEGPGTLDTDDRsEQEGSTLSVISATSSAGR (L) AWLLHS(0.0)GPEGPGT(0.0)LDT(0.0)DDRS(0.99)EQEGS(0.0)T(0.0)LS(0.0)VIS(0.0)AT(0.0)S(0.0)S(0.0)AGR s:Phosphorylated S AP5Z1 89744.7 2 2 4222.1 35.15 HUMAN 1 -10.4247 -0.4725 TLDTFLRSEEEKQHR-p Q96SK2;S248-p TLDTFLRSEEEKQHR 0.993618410078581 0.00278908336687029 -0.00133333333333335 -0.750333333333333 0.0581602811374304 38.6347454438831 -0.00133333333333334 -0.750333333333333 0.986697372898839 0.00013693846507565 -0.0174573420486243 -9.53392755631167 Q96SK2 TMEM209 Q96SK2.S248.p_TMEM209 Q96SK2_S248s _1_1_248_248 Q96SK2 Q96SK2|Q96SK2-2|Q96SK2-3 Transmembrane protein 209 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19371.19371.3 14.36 14.36 3.325 3 1 1 0 669.3461 1926.0584 S248s TMT10 241 (R) TLDTFLRsEEEK (Q) T(0.0)LDT(0.0)FLRS(0.99)EEEK K:TMT10,s:Phosphorylated S TMEM209 63319.9 1 7 1575.1 130.5 HUMAN 1 -0.0582 -38.6347 TLDVGLESPPLSVSE-p Q15386;S672-p TLDVGLESPPLSVSE 0.535294134687977 0.295835965894009 0.095 0.100333333333333 5.02362733839843 6.98350561994586 0.095 0.100333333333333 0.314512033197164 0.200285467275531 1.1083861930584 1.45772386507724 Q15386 UBE3C Q15386.S672.p_UBE3C Q15386_S672s _1_1_672_672 Q15386 Q15386 Ubiquitin-protein ligase E3C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31756.31756.3 15.07 15.07 4.459 5 1 1 0 911.4769 2652.4293 S672s TMT10 659 (R) IGPLQSTLDVGLEsPPLSVSEER (Q) IGPLQS(0.0)T(0.0)LDVGLES(0.99)PPLS(0.0)VS(0.0)EER s:Phosphorylated S UBE3C 125004.4 1 1 4902.1 25.26 HUMAN 1 5.0236 6.9835 TLDYSHCSLEQVPKE-p Q96RT1-8;S33-p TLDYSHCSLEQVPKE 0.688701936502988 0.121827505868407 0.081 0.196666666666667 3.03909930818613 12.0580426259911 0.081 0.196666666666667 0.496695321382731 0.0622580820379761 0.728342680566468 2.34145901320724 Q96RT1 ERBB2IP Q96RT1.8.S33.p_ERBB2IP Q96RT1-8_S33s _1_1_33_33 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5|Q96RT1-4|Q96RT1-6|Q96RT1-7|B4DIP2 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17670.17670.4 16.5 11.89 3.808 6 1 1 0 848.1586 3309.6495 S33s TMT10 16 (R) CLRGEEETVTTLDYSHCsLEQVPK (E) CLRGEEET(0.0)VT(0.0)T(0.0)LDY(0.0)S(0.0)HCS(0.99)LEQVPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ERBIN 159762.8 1 1 81.1 633.5 HUMAN 1 3.0391 12.058 TLEDLEDSWDRGIPR-p Q6P2Q9;S1411-p TLEDLEDSWDRGIPR 0.868689771390984 0.875244672236448 0.024 -0.0163333333333333 1.19325640934068 0.814530457711752 0.024 -0.0163333333333333 0.759756385845999 0.828985538117663 0.321676123727949 -0.226663848102952 Q6P2Q9 PRPF8 Q6P2Q9.S1411.p_PRPF8 Q6P2Q9_S1411s _1_1_1411_1411 Q6P2Q9 Q6P2Q9 Pre-mRNA-processing-splicing factor 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23351.23351.4 16.75 16.75 7.602 2 1 1 0 595.8021 2300.2196 S1411s TMT10 1402 (R) RLTLEDLEDsWDRGIPR (I) RLT(0.0)LEDLEDS(0.99)WDRGIPR s:Phosphorylated S PRPF8 274907.6 3 2 3766.1 43.6 HUMAN 1 1.1933 -0.8145 TLEGDRGSGNWRSHR-p Q6P1M3;S1000-p TLEGDRGSGNWRSHR 0.420944975696746 0.00328132424303653 -0.31 -1.05466666666667 6.93021490594831 37.1990309641338 -0.31 -1.05466666666667 0.202758238430763 0.000190588592847566 -1.44879208795974 -8.94013699234299 Q6P1M3 LLGL2 Q6P1M3.S1000.p_LLGL2 Q6P1M3_S1000s _1_1_1000_1000 Q6P1M3 Q6P1M3|J3QRV5 Lethal(2) giant larvae protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13029.13029.3 14.8 14.8 3.286 3 1 1 0 705.3334 2034.0202 S1000s TMT10 989 (K) EIQSTLEGDRGsGNWR (S) EIQS(0.0)T(0.0)LEGDRGS(0.99)GNWR s:Phosphorylated S LLGL2 114415.8 1 14 881.1 207.2 HUMAN 1 -6.9302 -37.199 TLFDIHRSPARRSHI-p Q9ULI0;S318-p TLFDIHRSPARRSHI 0.484055036785117 0.0221482115607153 0.208333333333333 -0.696 5.80451088397979 22.5993222480977 0.208333333333333 -0.696 0.262753743128406 0.00549626640877878 1.24965942132531 -4.4554633345922 Q9ULI0 ATAD2B Q9ULI0.S318.p_ATAD2B Q9ULI0_S318s _1_1_318_318 Q9ULI0 Q9ULI0|Q9ULI0-2 ATPase family AAA domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11535.11535.3 14.55 14.55 3.862 2 1 1 0 622.3132 1784.9605 S318s TMT10 309 (R) ENTLFDIHRsPAR (R) ENT(0.0)LFDIHRS(0.99)PAR s:Phosphorylated S ATAD2B 166451.5 4 7 531.1 280.81 HUMAN 1 5.8045 -22.5993 TLFEDRDSDSQDEVV-p E7ESJ3;S361-p TLFEDRDSDSQDEVV 0.703201133466592 0.486916370153701 0.0523333333333333 0.0673333333333333 2.87433407798857 4.1757640758766 0.0523333333333333 0.0673333333333333 0.515901264320468 0.382316984812668 0.694770474469021 0.950415246535595 E7ESJ3 NotFound E7ESJ3.S361.p_NotFound E7ESJ3_S361sS363s_2_2_361_363 E7ESJ3 E7ESJ3|Q9UPS8-3 Ankyrin repeat domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.28931.28931.5 17.66 13.98 2.186 7 2 2 0 686.5291 3268.6837 S361s S363s TMT10 354 (R) TLFEDRDsDsQDEVVVESLPTTSIK (V) T(0.0)LFEDRDS(0.99)DS(0.99)QDEVVVES(0.0)LPT(0.0)T(0.0)S(0.0)IK K:TMT10,s:Phosphorylated S ANKRD26 199524.4 5 14 812.1 221.02 HUMAN 1 2.8743 4.1758 TLFEVPDTW______-p O95453;T638-p TLFEVPDTW______ 0.473498904022036 0.0811046262107646 0.139333333333333 0.198666666666667 5.98022087706718 14.4640677468293 0.139333333333333 0.198666666666667 0.252335243447911 0.0357761189074219 1.28103927923212 2.77679474646587 O95453 PARN O95453.T638.p_PARN O95453_T638t _1_1_638_638 O95453 O95453|O95453-3|O95453-2|O95453-4 Poly(A)-specific ribonuclease PARN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35032.35032.2 16.5 16.5 16.496 3 1 1 0 893.4183 1705.8635 T638t TMT10 627 (K) NSPATLFEVPDtW (-) NS(0.0)PAT(0.0)LFEVPDT(0.99)W t:Phosphorylated T PARN 73963.1 2 11 320.1 365.2 HUMAN 1 5.9802 14.4641 TLFVADAYKGLFEVN-p Q9HDC9;Y169-p TLFVADAYKGLFEVN 0.814399806622497 0.137834895278433 -0.0406666666666667 0.155 1.71033710448582 11.3403991018439 -0.0406666666666667 0.155 0.674475672070887 0.0734446371934563 -0.443653691574176 2.21482100552681 Q9HDC9 APMAP Q9HDC9.Y169.p_APMAP Q9HDC9_S137sT142tY169y_3_3_137_169 Q9HDC9 Q9HDC9|Q9HDC9-2 Adipocyte plasma membrane-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.39276.39276.5 7.07 3.07 1.787 4 3 3 0 1176.5656 5636.9502 S137s T142t N160n Y169y N176n Hydrogen 135 (R) FGsGPCKtRDDEPVCGRPLGIRAGPnGTLFVADAyKGLFEVnPWK (R) FGS(0.99)GPCKT(0.99)RDDEPVCGRPLGIRAGPN(1.0)GT(0.0)LFVADAY(0.99)KGLFEVN(1.0)PWK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated,y:Phosphorylated Y APMAP 46650.7 5 4 4467.1 30.97 HUMAN 1 -1.7103 11.3404 TLGASEHSPLKTPYF-p Q92692;S433-p TLGASEHSPLKTPYF 0.167300432977981 0.0392092892252315 -0.690333333333333 -0.355333333333333 15.5274993133279 18.8829265981198 -0.690333333333333 -0.355333333333333 0.0280059344944385 0.0129332401015101 -2.97798203657814 -3.64004351082406 Q92692 PVRL2 Q92692.S433.p_PVRL2 Q92692_S433s _1_1_433_433 Q92692 Q92692 Nectin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24807.24807.4 22.22 22.22 1.119 4 1 1 0 845.7065 3299.8277 S433s TMT10 413 (K) AKLEAQEMPSQLFTLGASEHsPLK (T) AKLEAQEMPS(0.0)QLFT(0.0)LGAS(0.0)EHS(0.99)PLK K:TMT10,s:Phosphorylated S NECTIN2 58197.4 3 3 1687.1 120.88 HUMAN 1 -15.5275 -18.8829 TLGGRPVSPRRTTPL-p Q8WXX7;S1233-p TLGGRPVSPRRTTPL 0.492967742314699 0.577600589003011 0.0936666666666667 -0.065 5.65821094036203 3.21544512876629 0.0936666666666666 -0.065 0.271755852620886 0.476930928728151 1.22342851124433 -0.763730312683577 Q8WXX7 AUTS2 Q8WXX7.S1233.p_AUTS2 Q8WXX7_S1233s _1_1_1233_1233 Q8WXX7 Q8WXX7-2|A0A087WVB5|Q8WXX7-5 Autism susceptibility gene 2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23586.23586.5 20.55 20.55 1.258 6 1 1 0 584.5291 2838.6515 S1233s TMT10 1211 (K) TPPTAALSAPPPLISTLGGRPVsPRR (T) T(0.0)PPT(0.0)AALS(0.0)APPPLIS(0.0)T(0.0)LGGRPVS(0.99)PRR s:Phosphorylated S AUTS2 139379 12 9 684.1 243.98 HUMAN 1 5.6582 -3.2154 TLGIGQRTPFRIGIK-p Q9NZL9;T309-p TLGIGQRTPFRIGIK 0.243314382718007 0.0392027247832849 -0.309666666666667 0.269 11.7402766672108 18.8852978780489 -0.309666666666667 0.269 0.0669841935790469 0.0129261803844507 -2.28634985771127 3.6405347632436 Q9NZL9 MAT2B Q9NZL9.T309.p_MAT2B Q9NZL9_T309t _1_1_309_309 Q9NZL9 Q9NZL9|Q9NZL9-2 Methionine adenosyltransferase 2 subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20015.20015.3 11 5.55 2.011 2 1 1 0 599.6589 1716.9958 T309t TMT10 300 (K) LETLGIGQRtPFR (I) LET(0.0)LGIGQRT(0.99)PFR t:Phosphorylated T MAT2B 37893.4 1 3 3673.1 45.59 HUMAN 1 -11.7403 18.8853 TLGPHNPTPPPSLDM-p O95400;T243-p TLGPHNPTPPPSLDM 0.239062274684019 0.0997993960247646 0.186 0.192333333333333 11.8809788677215 13.2291610160474 0.186 0.192333333333333 0.064848825260699 0.0475427061590362 2.31124120683842 2.55101443610307 O95400 CD2BP2 O95400.T243.p_CD2BP2 O95400_T243t_1_1_243_243 O95400 O95400 CD2 antigen cytoplasmic tail-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.34212.34212.3 16.91 15.38 2.681 6 1 1 0 1490.6985 4389.1216 N241n T243t TMT10 231 (K) GLGCQTLGPHnPtPPPSLDMFAEELAEEELETPTPTQR (G) GLGCQT(0.0)LGPHN(1.0)PT(0.99)PPPS(0.0)LDMFAEELAEEELET(0.0)PT(0.0)PT(0.0)QR C:Carbamidomethylation,n:Deamidated,t:Phosphorylated T CD2BP2 37759.9 13 4 852.1 212.12 HUMAN 1 11.881 13.2292 TLGPTPTTPPQPPDP-p O60927;T109-p TLGPTPTTPPQPPDP 0.452571807755226 0.799354239130153 0.107666666666667 0.0286666666666667 6.35186374510878 1.36008245917157 0.107666666666667 0.0286666666666667 0.231640036924083 0.731125201531587 1.34701186578544 0.361874808809522 O60927 PPP1R11 O60927.T109.p_PPP1R11 O60927_T109t _1_1_109_109 O60927 O60927|Q5SRK2 Protein phosphatase 1 regulatory subunit 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18983.19188.4 15.81 15.81 1.145 5 1 1 0 738.86 2872.4501 T109t TMT10 101 (R) ATLGPTPTtPPQPPDPSQPPPGPMQH (-) AT(0.0)LGPT(0.0)PT(0.0)T(0.99)PPQPPDPS(0.0)QPPPGPMQH t:Phosphorylated T PPP1R11 14237.5 5 3 2904.1 66.4 HUMAN 1 6.3519 1.3601 TLGREVMSPLQAMSS-p Q9BYT8;S32-p TLGREVMSPLQAMSS 0.236569833702023 0.292337381518383 -0.222666666666667 0.142 11.9949851144684 7.05044911551719 -0.222666666666667 0.142 0.0631686344401582 0.19722187731607 -2.33144511030418 1.46943229830086 Q9BYT8 NLN Q9BYT8.S32.p_NLN Q9BYT8_S32s _1_1_32_32 Q9BYT8 Q9BYT8 Neurolysin, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26871.26871.3 18 18 6.757 5 1 1 0 712.6733 2056.0405 S32s TMT10 29 (R) EVMsPLQAMSSYTVAGR (N) EVMS(0.99)PLQAMS(0.0)S(0.0)Y(0.0)T(0.0)VAGR s:Phosphorylated S NLN 81392.1 2 1 4026.1 38.91 HUMAN 1 -11.995 7.0504 TLGRSGMSPPPCKLP-p Q9H6T0;S573-p TLGRSGMSPPPCKLP 0.486043064859747 0.798232882108131 0.0936666666666667 0.034 5.77340507558088 1.36914421860922 0.0936666666666667 0.034 0.264642440220155 0.72960126471101 1.24409041489972 0.364034635695195 Q9H6T0 ESRP2 Q9H6T0.S573.p_ESRP2 Q9H6T0_S573s _1_1_573_573 Q9H6T0 Q9H6T0|Q9H6T0-2 Epithelial splicing regulatory protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9787.9995.2 10.7 7.14 2.945 2 1 1 0 749.863 1418.7536 S573s TMT10 570 (R) SGMsPPPCK (L) S(0.0)GMS(0.99)PPPCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ESRP2 79255.4 15 2 2292.1 89.46 HUMAN 1 5.7734 1.3691 TLGSRALSHDSIFIP-p Q6NV74;S92-p TLGSRALSHDSIFIP 0.525194211450544 0.0243985776267726 0.104333333333333 0.302 5.17298991357141 21.9624220077424 0.104333333333333 0.302 0.303879223960545 0.00636440486764372 1.13566697340678 4.30879508346381 Q6NV74 KIAA1211L Q6NV74.S92.p_KIAA1211L Q6NV74_S92s _1_1_92_92 Q6NV74 Q6NV74 Uncharacterized protein KIAA1211-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16754.16754.3 16.32 16.32 1.623 4 1 1 0 869.1047 2525.331 S92s TMT10 90 (R) ALsHDSIFIPESGQDATRPVR (V) ALS(0.99)HDS(0.0)IFIPES(0.0)GQDAT(0.0)RPVR s:Phosphorylated S KIAA1211L 102725.9 5 3 756.1 230.87 HUMAN 1 5.173 21.9624 TLHLLQLSGQRSLVQ-p Q12888-2;S350-p TLHLLQLSGQRSLVQ 0.232221202833204 0.0867857397807485 0.559666666666667 0.427 12.196477731896 14.0533921538167 0.559666666666667 0.427 0.0603048479530242 0.0393242804416659 2.36723348648636 2.70109882734941 Q12888 TP53BP1 Q12888.2.S350.p_TP53BP1 Q12888-2_S350s _1_1_350_350 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22271.22271.4 7.56 7.56 1.346 12 1 1 0 1018.2345 3989.9494 S350s TMT10 318 (K) TVSSDGCSTPSREEGGCSLASTPATTLHLLQLsGQR (S) T(0.0)VS(0.0)S(0.0)DGCS(0.0)T(0.0)PS(0.0)REEGGCS(0.0)LAS(0.0)T(0.0)PAT(0.0)T(0.0)LHLLQLS(0.99)GQR C:Carbamidomethylation,s:Phosphorylated S TP53BP1 216167.2 1 15 3.1 2297.07 HUMAN 1 12.1965 14.0534 TLHLNKGTPSQSPVV-p P52594-4;T177-p TLHLNKGTPSQSPVV 0.306383440584975 0.896278131388149 0.219333333333333 -0.0156666666666666 9.61949402983079 0.667721198873609 0.219333333333333 -0.0156666666666666 0.10915675009523 0.857487662431744 1.91567254194941 -0.188301099944249 P52594 AGFG1 P52594.4.T177.p_AGFG1 P52594-4_T177t _1_1_177_177 P52594-4 P52594|P52594-3|B8ZZY2|P52594-2|P52594-4 Isoform 4 of Arf-GAP domain and FG repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20127.20127.4 16.45 16.45 1.152 6 1 1 0 768.1685 2989.6835 T177t TMT10 162 (K) SLLGDSAPTLHLNKGtPSQSPVVGR (S) S(0.0)LLGDS(0.0)APT(0.0)LHLNKGT(0.99)PS(0.0)QS(0.0)PVVGR K:TMT10,t:Phosphorylated T AGFG1 61108.2 2 3 2791.1 70.5 HUMAN 1 9.6195 -0.6677 TLIKEIQSPLSSICD-p Q9H6R7;S501-p TLIKEIQSPLSSICD 0.125743941781331 0.0290465038678567 0.326333333333333 0.28 18.7333188692828 20.807483142706 0.326333333333333 0.28 0.0133865330040817 0.00830331828491855 3.61222549255299 4.05044104907749 Q9H6R7 C2orf44 Q9H6R7.S501.p_C2orf44 Q9H6R7_S501s _1_1_501_501 Q9H6R7 Q9H6R7|Q9H6R7-2|Q9H6R7-3 WD repeat and coiled-coil-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30455.30455.3 21.27 21.27 2.259 6 1 1 0 1120.8921 3280.6932 S501s TMT10 498 (K) EIQsPLSSICDGSIALDAEPVTQPASLPR (H) EIQS(0.99)PLS(0.0)S(0.0)ICDGS(0.0)IALDAEPVT(0.0)QPAS(0.0)LPR C:Carbamidomethylation,s:Phosphorylated S WDCP 80332.2 3 2 2288.1 89.58 HUMAN 1 18.7333 20.8075 TLIPSPNSPFQKVGK-p Q96AY4;S2120-p TLIPSPNSPFQKVGK 0.246495783528647 0.0527171545383055 -0.212666666666667 -0.264 11.6366984461805 17.0502404494747 -0.212666666666667 -0.264 0.0686009540176464 0.019723135348927 -2.26805579360206 -3.27003570293377 Q96AY4 TTC28 Q96AY4.S2120.p_TTC28 Q96AY4_S2120s _1_1_2120_2120 Q96AY4 Q96AY4|A0A087WW06 Tetratricopeptide repeat protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26607.26607.3 11.65 11.73 1.523 3 1 1 0 666.6895 1918.0872 S2120s TMT10 2112 (K) MTLIPSPNsPFQK (V) MT(0.0)LIPS(0.0)PNS(0.99)PFQK K:TMT10,s:Phosphorylated S TTC28 272819.5 1 6 1011.1 188.93 HUMAN 1 -11.6367 -17.0502 TLKEHDNSVKEEATA-p Q2M2Z5;S478-p TLKEHDNSVKEEATA 0.412507711448368 0.120297291769479 -0.115 0.254333333333333 7.09338342974588 12.1266384923306 -0.115 0.254333333333333 0.195281749418844 0.0612824544046403 -1.47734979289776 2.35362806574053 Q2M2Z5 KIZ Q2M2Z5.S478.p_KIZ Q2M2Z5_S478s _1_1_478_478 Q2M2Z5 Q2M2Z5|Q2M2Z5-4 Centrosomal protein kizuna HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18006.18006.5 14.55 14.55 14.554 2 1 1 0 522.2879 2527.4447 S478s TMT10 474 (K) EHDNsVKEEATALLRK (A) EHDNS(0.99)VKEEAT(0.0)ALLRK K:TMT10,s:Phosphorylated S KIZ 75794.3 2 3 2276.1 90.11 HUMAN 1 -7.0934 12.1266 TLKKDRLSASDMLQV-p Q8TAF3;S586-p TLKKDRLSASDMLQV 0.807840650085328 0.72197682317235 0.035 0.0346666666666667 1.77919102675433 1.94818567161621 0.035 0.0346666666666667 0.663866719313213 0.638530185752953 0.459327376238511 0.497239377550879 Q8TAF3 WDR48 Q8TAF3.S586.p_WDR48 Q8TAF3_S586s _1_1_586_586 Q8TAF3 Q8TAF3|Q8TAF3-3|Q8TAF3-4|Q8TAF3-5|Q8TAF3-2 WD repeat-containing protein 48 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16304.16304.3 10.25 10.25 2.354 2 1 1 0 567.2846 1619.8737 S586s TMT10 583 (K) DRLsASDMLQVR (K) DRLS(0.99)AS(0.0)DMLQVR s:Phosphorylated S WDR48 77064.9 2 3 3454.1 50.54 HUMAN 1 1.7792 1.9482 TLKLTTPTYGDLNHL-p P07437;T221-p TLKLTTPTYGDLNHL 0.546461104619236 0.0734611468879375 0.08 0.199333333333333 4.84446141928625 15.0560971688185 0.08 0.199333333333333 0.327758420521873 0.0312169366545728 1.0754762432345 2.88708628664151 P07437 TUBB P07437.T221.p_TUBB P07437_T221t _1_1_221_221 P07437 Q5ST81|Q13885|Q9BVA1|P68371|P07437|P04350|Q5JP53 Tubulin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.34455.34455.3 16.32 16.32 1.404 9 1 1 0 1006.4937 2937.5011 T221t TMT10 217 (K) LTTPtYGDLNHLVSATMSGVTTCLR (F) LT(0.0)T(0.0)PT(0.99)Y(0.0)GDLNHLVS(0.0)AT(0.0)MS(0.0)GVT(0.0)T(0.0)CLR C:Carbamidomethylation,t:Phosphorylated T TUBB 50126.4 4 14 333.1 357.15 HUMAN 1 4.8445 15.0561 TLKPTYRTPERARRH-p Q9NSY1;T1014-p TLKPTYRTPERARRH 0.86295777496239 0.693001752523072 0.025 0.04 1.24841140306322 2.18610086209169 0.025 0.04 0.750168561781762 0.604491103786408 0.335079295549947 0.549566006441435 Q9NSY1 BMP2K Q9NSY1.T1014.p_BMP2K Q9NSY1_T1014t _1_1_1014_1014 Q9NSY1 Q9NSY1|Q5H9B9 BMP-2-inducible protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7435.7435.4 8.77 8.77 2.597 4 1 1 0 475.7673 1820.0794 T1014t TMT10 1007 (K) TLKPTYRtPER (A) T(0.0)LKPT(0.0)Y(0.0)RT(0.99)PER K:TMT10,t:Phosphorylated T BMP2K 130025 4 8 804.1 222.57 HUMAN 1 1.2484 2.1861 TLKRKTSSVSSISQV-p P42356;S257-p TLKRKTSSVSSISQV 0.179989525186209 0.199446593861233 0.361 -0.137 14.6925912290691 9.21131400778286 0.361 -0.137 0.0339422694748252 0.119913643577062 2.82099277701128 -1.84426812929754 P42356 NotFound P42356.S257.p_NotFound P42356_S257s _1_1_257_257 P42356 P42356 Phosphatidylinositol 4-kinase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10922.10922.3 10.23 10.23 1.488 7 1 1 0 710.7117 2050.1545 S257s TMT10 254 (R) KTSsVSSISQVSPER (G) KT(0.0)S(0.0)S(0.99)VS(0.0)S(0.0)IS(0.0)QVS(0.0)PER K:TMT10,s:Phosphorylated S PI4KA 239393.6 1 7 1109.1 176.13 HUMAN 1 14.6926 -9.2113 TLLEVCGSWPEGFGL-p Q9H6U6;S838-p TLLEVCGSWPEGFGL 0.262865497671734 0.745542940054299 -0.175333333333333 0.0406666666666667 11.008980673445 1.76006411255116 -0.175333333333333 0.0406666666666667 0.0792687359199008 0.666796925577716 -2.15768275811396 0.45493500198353 Q9H6U6 BCAS3 Q9H6U6.S838.p_BCAS3 Q9H6U6_S838s _1_1_838_838 Q9H6U6 Q9H6U6-8|Q9H6U6-3|Q9H6U6-7|Q9H6U6-2|K7ESE9|Q9H6U6-6 Breast carcinoma-amplified sequence 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34411.34616.3 26.94 26.94 10.698 3 1 1 0 772.7162 2236.1634 S838s TMT10 829 (R) SVTLLEVCGsWPEGFGLR (H) S(0.0)VT(0.0)LLEVCGS(0.99)WPEGFGLR C:Carbamidomethylation,s:Phosphorylated S BCAS3 102547.1 4 8 847.1 212.9 HUMAN 1 -11.009 1.7601 TLLGTIFSPVFNFFS-p Q05D32;S146-p TLLGTIFSPVFNFFS 0.165364843830317 0.573318920895897 -0.229333333333333 0.0673333333333333 15.64792075831 3.25740039565886 -0.229333333333333 0.0673333333333334 0.0272400514906538 0.472345693827295 -3.00087557429558 0.772111610693799 Q05D32 CTDSPL2 Q05D32.S146.p_CTDSPL2 Q05D32_S146s _1_1_146_146 Q05D32 Q05D32|Q05D32-2 CTD small phosphatase-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.38311.38311.3 17.58 17.58 4.129 5 1 1 0 913.8266 2659.49 S146s TMT10 138 (R) TTLLGTIFsPVFNFFSPANK (N) T(0.0)T(0.0)LLGT(0.0)IFS(0.99)PVFNFFS(0.0)PANK K:TMT10,s:Phosphorylated S CTDSPL2 53168.9 8 7 899.1 203.79 HUMAN 1 -15.6479 3.2574 TLLISSLSPALPAEH-p Q8NDT2;S147-p TLLISSLSPALPAEH 0.331242352186695 0.188277658963683 -0.14 0.154 8.96522451569474 9.53923189739294 -0.14 0.154 0.126904653729573 0.111192836794629 -1.80234292625961 1.90102884665198 Q8NDT2 RBM15B Q8NDT2.S147.p_RBM15B Q8NDT2_S147s _1_1_147_147 Q8NDT2 Q8NDT2 Putative RNA-binding protein 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28104.28104.3 16.82 16.82 1.149 4 1 1 0 791.0885 2291.2808 S147s TMT10 140 (K) TLLISSLsPALPAEHLEDR (L) T(0.0)LLIS(0.0)S(0.0)LS(0.99)PALPAEHLEDR s:Phosphorylated S RBM15B 97489 4 4 199.1 454.11 HUMAN 1 -8.9652 9.5392 TLLKMTSSPVGPGTA-p Q14686;S1892-p TLLKMTSSPVGPGTA 0.581247754040778 0.492658693652694 0.0866666666666667 0.0663333333333333 4.33472158494723 4.11038932524099 0.0866666666666667 0.0663333333333333 0.368576669600009 0.388115571636169 0.980595222844488 0.938010552162687 Q14686 NCOA6 Q14686.S1892.p_NCOA6 Q14686_S1892s _1_1_1892_1892 Q14686 Q14686 Nuclear receptor coactivator 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22749.22749.2 15.46 15.46 1.133 8 1 1 0 1381.196 2681.413 S1892s TMT10 1889 (K) MTSsPVGPGTASAGPSLPGGALPTSVR (S) MT(0.0)S(0.0)S(0.99)PVGPGT(0.0)AS(0.0)AGPS(0.0)LPGGALPT(0.0)S(0.0)VR s:Phosphorylated S NCOA6 219484.1 10 13 327.1 360.02 HUMAN 1 4.3347 4.1104 TLLNERNSLLHKASH-p Q6P4Q7;S764-p TLLNERNSLLHKASH 0.0519525792237636 0.0173615564197841 -0.952666666666667 -0.377 28.0556229014847 24.276441518006 -0.952666666666667 -0.377 0.00156472387733857 0.00373556113389346 -5.86167373347163 -4.8569904475244 Q6P4Q7 CNNM4 Q6P4Q7.S764.p_CNNM4 Q6P4Q7_S764s _1_1_764_764 Q6P4Q7 Q6P4Q7 Metal transporter CNNM4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27339.27339.5 19.57 19.57 2.164 5 1 1 0 610.1293 2966.6563 S764s TMT10 747 (K) SELPVVDETTTLLNERNsLLHK (A) S(0.0)ELPVVDET(0.0)T(0.0)T(0.0)LLNERNS(0.99)LLHK K:TMT10,s:Phosphorylated S CNNM4 87175.9 5 7 1521.1 134.29 HUMAN 1 -28.0556 -24.2764 TLLPRLPSEPGMTLL-p Q96BJ3;S162-p TLLPRLPSEPGMTLL 0.560423836734948 0.375980839216351 -0.143 0.0963333333333333 4.63540187359601 5.64098216944296 -0.143 0.0963333333333333 0.343921885160079 0.272836068642703 -1.03679880315353 1.22005876987747 Q96BJ3 AIDA Q96BJ3.S162.p_AIDA Q96BJ3_S162s _1_1_162_162 Q96BJ3 Q96BJ3 Axin interactor, dorsalization-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30964.30964.3 16.08 16.08 6.342 3 1 1 0 579.6452 1656.9556 S162s TMT10 160 (R) LPsEPGMTLLTIR (I) LPS(0.99)EPGMT(0.0)LLT(0.0)IR s:Phosphorylated S AIDA 35193.7 2 4 2219.1 92.95 HUMAN 1 -4.6354 5.641 TLLRGAFSPFGNIID-p P18615-3;S288-p TLLRGAFSPFGNIID 0.674817762895961 0.0932341293817583 0.0776666666666667 0.201333333333333 3.20057365539634 13.6283552673862 0.0776666666666667 0.201333333333333 0.478566874710214 0.0433675085979405 0.760864788421721 2.62341023571869 P18615 NELFE P18615.3.S288.p_NELFE P18615-3_S288s _1_1_288_288 P18615-3 P18615-3|P18615-4 Isoform 2 of Negative elongation factor E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.37144.37144.3 19.22 19.22 8.019 2 1 1 0 748.3636 2163.1106 S288s TMT10 285 (R) GAFsPFGNIIDLSMDPPR (N) GAFS(0.99)PFGNIIDLS(0.0)MDPPR s:Phosphorylated S NELFE 44038 8 8 611.1 261.65 HUMAN 1 3.2006 13.6284 TLMSVPRYLPRPANP-p A0A087WXI5;Y818-p TLMSVPRYLPRPANP 0.623773349195936 0.726111292802451 -0.0716666666666667 -0.0406666666666666 3.80856670896817 1.91284919008614 -0.0716666666666667 -0.0406666666666666 0.416047895067479 0.643746796695341 -0.880355429578498 -0.489358266750233 A0A087WXI5 NotFound A0A087WXI5.Y818.p_NotFound A0A087WXI5_Y818y _1_1_818_818 A0A087WXI5 A0A087WXI5|P12830 Cadherin-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.34817.34852.3 20.55 20.55 99 1 1 1 0 951.8271 2773.4925 Y818y TMT10 818 (R) yLPRPANPDEIGNFIDENLK (A) Y(1.0)LPRPANPDEIGNFIDENLK K:TMT10,y:Phosphorylated Y CDH1 100652.9 1 1 165.1 20.55 HUMAN 1 -3.8086 -1.9128 TLNQLRLSPVPPVPG-p Q9Y6I3-1;S622-p TLNQLRLSPVPPVPG 0.426313016558813 0.00896004419635339 0.122666666666667 0.446666666666667 6.82133710536593 29.0092453456429 0.122666666666667 0.446666666666667 0.207905648887703 0.00125624823744286 1.42970153260806 6.12696509862078 Q9Y6I3 EPN1 Q9Y6I3.1.S622.p_EPN1 Q9Y6I3-1_S622s_1_1_622_622 Q9Y6I3-1 Q9Y6I3-1|Q9Y6I3-3 Isoform 2 of Epsin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.38667.38667.4 11.22 11.22 0 5 1 1 0 1105.579 4338.3272 S622s N658n TMT10 621 (R) LsPVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNTnPFLL (-) LS(0.99)PVPPVPGAPPT(0.0)Y(0.0)IS(0.0)PLGGGPGLPPMMPPGPPAPN(0.50)T(0.0)N(0.50)PFLL s:Phosphorylated S,n:Deamidated EPN1 69266.5 2 9 856.1 210.87 HUMAN 1 6.8213 29.0092 TLNRNGLSPPPCKLP-p Q6NXG1;S543-p TLNRNGLSPPPCKLP 0.925866359376905 0.791272961181784 0.0146666666666667 0.0363333333333334 0.660730946620136 1.41545199257133 0.0146666666666667 0.0363333333333334 0.858868955958278 0.721863031034642 0.186468351222854 0.375032420711475 Q6NXG1 ESRP1 Q6NXG1.S543.p_ESRP1 Q6NXG1_S543s _1_1_543_543 Q6NXG1 Q6NXG1|Q6NXG1-4|Q6NXG1-2 Epithelial splicing regulatory protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36707.36707.4 25.74 25.74 2.275 8 1 1 0 1285.6764 5059.7194 S543s TMT10 540 (R) NGLsPPPCKLPCLSPPSYTFPAPAAVIPTEAAIYQPSVILNPR (A) NGLS(0.99)PPPCKLPCLS(0.0)PPS(0.0)Y(0.0)T(0.0)FPAPAAVIPT(0.0)EAAIY(0.0)QPS(0.0)VILNPR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ESRP1 76496.9 10 2 1809.1 113.42 HUMAN 1 0.6607 1.4155 TLPAARSSLGSLQTP-p C9J6P4;S387-p TLPAARSSLGSLQTP 0.714611940188112 0.0270491322016242 -0.0743333333333333 -0.34 2.75008441945785 21.275276058686 -0.0743333333333334 -0.34 0.530874124840977 0.00745542480217058 -0.66917785644016 -4.15393445763655 C9J6P4 ZC3HAV1 C9J6P4.S387.p_ZC3HAV1 C9J6P4_S387s _1_1_387_387 C9J6P4 C9J6P4|Q7Z2W4|Q7Z2W4-2|Q7Z2W4-3 Zinc finger CCCH-type antiviral protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16638.16638.2 16.17 10.59 1.485 6 1 1 0 928.4734 1775.9701 S387s TMT10 386 (R) SsLGSLQTPEAVTTR (K) S(0.0)S(0.99)LGS(0.0)LQT(0.0)PEAVT(0.0)T(0.0)R s:Phosphorylated S ZC3HAV1 115909.2 7 11 361.1 343.37 HUMAN 1 -2.7501 -21.2753 TLPAMDNSRLHRASS-p Q9UQC2;S398-p TLPAMDNSRLHRASS 0.18878716220005 0.912372735326617 0.276333333333333 -0.034 14.1812737951111 0.557498424915695 0.276333333333333 -0.034 0.0381832262186087 0.879528987519487 2.72626176858768 -0.158859718630751 Q9UQC2 GAB2 Q9UQC2.S398.p_GAB2 Q9UQC2_S381sT385tS398s_3_3_381_398 Q9UQC2 Q9UQC2|Q9UQC2-2 GRB2-associated-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12611.12611.4 7.8 7.8 1.549 6 3 3 0 855.6557 3179.6905 S381s T385t S398s TMT10 373 (R) PPISENSRsVAAtIPRRNTLPAMDNsR (L) PPIS(0.0)ENS(0.0)RS(0.99)VAAT(0.99)IPRRNT(0.0)LPAMDNS(0.99)R s:Phosphorylated S,t:Phosphorylated T GAB2 74969.7 2 18 698.1 241.06 HUMAN 1 14.1813 -0.5575 TLPANRSSPSGASSP-p O75592;S2795-p TLPANRSSPSGASSP 0.246863210495205 0.115753589239739 0.167333333333333 -0.200333333333333 11.6160525161856 12.3517024982504 0.167333333333333 -0.200333333333333 0.0689278525719699 0.0581875069468894 2.26441223498164 -2.39364094052789 O75592 MYCBP2 O75592.S2795.p_MYCBP2 O75592_S2795s _1_1_2795_2795 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4921.4921.3 13.08 8.7 1.406 6 1 1 0 631.9852 1813.9718 S2795s TMT10 2788 (K) TLPANRSsPSGASSPR (S) T(0.0)LPANRS(0.0)S(0.99)PS(0.0)GAS(0.0)S(0.0)PR s:Phosphorylated S MYCBP2 518176.7 4 11 252.1 405.77 HUMAN 1 11.6161 -12.3517 TLPDFSKYSMPDNSP-p Q9HBL0;Y1440-p TLPDFSKYSMPDNSP 0.032689595756867 0.0353661191291574 0.810666666666667 -0.727 34.7721428087925 19.5362649641875 0.810666666666667 -0.727 0.000333261940763666 0.0111268825426123 8.02613330461149 -3.77669717233545 Q9HBL0 TNS1 Q9HBL0.Y1440.p_TNS1 Q9HBL0_Y1440y _1_1_1440_1440 Q9HBL0 Q9HBL0|E9PF55|E9PGF5|A0A087WWW7|H0Y4U1 Tensin-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8712.8712.2 11.68 11.68 2.181 4 1 1 0 803.3473 1525.7154 Y1440y TMT10 1440 (K) ySMPDNSPETR (A) Y(0.99)S(0.0)MPDNS(0.0)PET(0.0)R y:Phosphorylated Y TNS1 186610.9 1 1 305.1 11.68 HUMAN 1 34.7721 -19.5363 TLPDSGFSANIEDIN-p P18583-5;S1722-p TLPDSGFSANIEDIN 0.352159645747124 0.0104377289471877 -0.190333333333333 1.063 8.41717767943038 27.8092721499191 -0.190333333333333 1.063 0.143973390457119 0.00165604748329666 -1.7074640035512 5.78400873062338 P18583 SON P18583.5.S1722.p_SON P18583-5_S1722s_1_1_1722_1722 P18583-5 P18583-9|P18583-5|P18583-7|P18583-4|P18583-3|P18583-10|P18583-2|P18583-6 Isoform D of Protein SON HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.31570.31570.5 23.49 23.49 2.334 3 1 1 0 894.0836 4385.4211 S1722s N1724n TMT10 1707 (K) EVPPPPKETLPDSGFsAnIEDINEADLVRPLLPK (D) EVPPPPKET(0.0)LPDS(0.0)GFS(0.99)AN(0.99)IEDIN(0.0)EADLVRPLLPK K:TMT10,s:Phosphorylated S,n:Deamidated SON 267429.6 6 26 45.1 778.56 HUMAN 1 -8.4172 27.8093 TLPGACGSPQKLIDG-p Q9UBZ9;S1108-p TLPGACGSPQKLIDG 0.215386959262723 0.00375553060202295 -0.292 -0.761 12.8469728872213 35.9756122188782 -0.292 -0.761 0.0519161778196222 0.000252603159387874 -2.48352847768512 -8.46039911413975 Q9UBZ9 REV1 Q9UBZ9.S1108.p_REV1 Q9UBZ9_S1108s _1_1_1108_1108 Q9UBZ9 Q9UBZ9|Q9UBZ9-2 DNA repair protein REV1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30422.30422.4 12.94 12.94 5.769 2 1 1 0 668.12 2589.5041 S1108s TMT10 1101 (K) TLPGACGsPQKLIDGFLK (H) T(0.0)LPGACGS(0.99)PQKLIDGFLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S REV1 139443.7 3 7 1665.1 122.52 HUMAN 1 -12.847 -35.9756 TLPKGDISISGPKVN-p Q09666;S658-p TLPKGDISISGPKVN 0.0868192866229433 0.0102578987745762 0.424333333333333 -0.433666666666667 22.6571434086523 27.9264530267699 0.424333333333333 -0.433666666666667 0.00542357511179137 0.00161196162024219 4.47384088074445 -5.8168321602129 Q09666 AHNAK Q09666.S658.p_AHNAK Q09666_S658s _1_1_658_658 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14692.14986.2 8.75 8.75 1.24 2 1 1 0 706.3837 1331.7935 S658s TMT10 655 (K) GDIsISGPK (V) GDIS(0.99)IS(0.0)GPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 34 1.1 4313.36 HUMAN 1 22.6571 -27.9265 TLPKGFGSVEELCTN-p Q2NKX8;S820-p TLPKGFGSVEELCTN 0.714031256459032 0.156664752189486 0.0596666666666667 -0.190666666666667 2.75750879732917 10.5865960297497 0.0596666666666667 -0.190666666666667 0.529967356918266 0.0873655865553753 0.670714042916348 -2.08293387211543 Q2NKX8 ERCC6L Q2NKX8.S820.p_ERCC6L Q2NKX8_S820s _1_1_820_820 Q2NKX8 Q2NKX8|B5MDQ0 DNA excision repair protein ERCC-6-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.24080.24080.3 19.07 19.07 5.406 4 1 1 0 828.3929 2403.1936 S820s TMT10 817 (K) GFGsVEELCTNSSLGMEK (S) GFGS(0.99)VEELCT(0.0)NS(0.0)S(0.0)LGMEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ERCC6L 142070.4 7 5 422.1 320.12 HUMAN 1 2.7575 -10.5866 TLPRRAQSLKAPSIA-p Q6R327-3;S1302-p TLPRRAQSLKAPSIA 0.727190854539402 0.584215893463348 0.0706666666666667 0.0876666666666667 2.62375669005766 3.15287430028032 0.0706666666666667 0.0876666666666667 0.546542993287728 0.483852032785971 0.642899229972196 0.751186819125207 Q6R327 RICTOR Q6R327.3.S1302.p_RICTOR Q6R327-3_S1302s _1_1_1302_1302 Q6R327-3 Q6R327-3 Isoform 3 of Rapamycin-insensitive companion of mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19194.19194.3 15.25 15.25 3.347 3 1 1 0 699.0883 2015.2832 S1302s TMT10 1300 (R) AQsLKAPSIATIK (S) AQS(0.99)LKAPS(0.0)IAT(0.0)IK K:TMT10,s:Phosphorylated S RICTOR 197118.3 6 14 452.1 308.36 HUMAN 1 2.6238 3.1529 TLPSIWDSPTKQLSV-p Q9Y673;S62-p TLPSIWDSPTKQLSV 0.490737445741576 0.362634117704378 -0.127 -0.102333333333333 5.69268093937326 5.84175923733846 -0.127 -0.102333333333333 0.269607460724285 0.260509806476049 -1.22961767445529 -1.25603109043186 Q9Y673 ALG5 Q9Y673.S62.p_ALG5 Q9Y673_S62s _1_1_62_62 Q9Y673 Q9Y673|Q9Y673-2 Dolichyl-phosphate beta-glucosyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24466.24466.3 14.82 14.82 2.357 4 1 1 0 637.9996 1832.0206 S62s TMT10 54 (K) ETLPSIWDsPTK (Q) ET(0.0)LPS(0.0)IWDS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S ALG5 37173.7 3 1 5994.1 14.82 HUMAN 1 -5.6927 -5.8418 TLPSKEDSVTEEKEI-p O95405;S501-p TLPSKEDSVTEEKEI 0.146328161002747 0.00137827447980014 -0.244333333333333 -0.996666666666667 16.998530515079 46.4123782626789 -0.244333333333333 -0.996666666666667 0.0199593754896391 2.28434751732873e-05 -3.26234538104423 -13.4289651387654 O95405 ZFYVE9 O95405.S501.p_ZFYVE9 O95405_S501s _1_1_501_501 O95405 O95405|O95405-2|O95405-3 Zinc finger FYVE domain-containing protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12421.12421.3 13.78 13.78 2.227 4 1 1 0 744.0677 2150.2159 S501s TMT10 494 (K) TLPSKEDsVTEEK (E) T(0.0)LPS(0.0)KEDS(0.99)VT(0.0)EEK K:TMT10,s:Phosphorylated S ZFYVE9 159024.6 2 1 4731.1 27.34 HUMAN 1 -16.9985 -46.4124 TLPSSPRSNTPMGDK-p Q5T4S7-2;S2722-p TLPSSPRSNTPMGDK 0.872878371047177 0.320206693278625 -0.0996666666666667 0.364333333333333 1.1569783037598 6.54204171721025 -0.0996666666666668 0.364333333333333 0.7661294723909 0.221715384026375 -0.312804143239745 1.3802303684163 Q5T4S7 UBR4 Q5T4S7.2.S2722.p_UBR4 Q5T4S7-2_S2722sT2724t_2_2_2722_2724 Q5T4S7-2 Q5T4S7-2|Q5T4S7-4|Q5T4S7-3 Isoform 2 of E3 ubiquitin-protein ligase UBR4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.6255.6255.3 8.31 8.31 99 2 2 2 0 911.342 2556.0932 S2722s T2724t M2726m Hydrogen 2722 (R) sNtPmGDKDDDDDDDADEK (M) S(1.0)NT(1.0)PM(1.0)GDKDDDDDDDADEK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T,m:Oxidized methionine UBR4 583136.9 1 19 528.1 281.83 HUMAN 1 -1.157 6.542 TLQDRPPSPFREPPG-p Q86UU1;S404-p TLQDRPPSPFREPPG 0.752880589938391 0.117316132236844 0.0806666666666667 -0.215333333333333 2.35230804145156 12.2698044186481 0.0806666666666667 -0.215333333333333 0.581793943425686 0.0592952027140734 0.585483043092742 -2.37906521417862 Q86UU1 PHLDB1 Q86UU1.S404.p_PHLDB1 Q86UU1_S404s _1_1_404_404 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.15630.15845.4 13.34 13.34 2.887 3 1 1 0 637.0752 2465.3098 S404s TMT10 395 (K) IGTLQDRPPsPFREPPGSER (V) IGT(0.0)LQDRPPS(0.99)PFREPPGS(0.0)ER s:Phosphorylated S PHLDB1 152129.1 3 5 99.1 600.41 HUMAN 1 2.3523 -12.2698 TLQEEQRTPPPGQDT-p Q12802-2;T953-p TLQEEQRTPPPGQDT 0.672404982595977 0.035079980559162 -0.0586666666666667 -0.362333333333333 3.22761167470049 19.5876604205696 -0.0586666666666667 -0.362333333333333 0.47559669999028 0.0109959804224732 -0.766275508822074 -3.78756006708178 Q12802 AKAP13 Q12802.2.T953.p_AKAP13 Q12802-2_T953t _1_1_953_953 Q12802-2 Q12802-2|Q12802-4 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12116.12116.5 14.34 14.34 1.156 5 1 1 0 738.962 3610.8138 T953t TMT10 939 (K) ENALSSGTLQEEQRtPPPGQDTQQFHEK (S) ENALS(0.0)S(0.0)GT(0.0)LQEEQRT(0.99)PPPGQDT(0.0)QQFHEK K:TMT10,t:Phosphorylated T AKAP13 310921 2 5 66.1 683.25 HUMAN 1 -3.2276 -19.5877 TLQFRQASDTEEDDI-p Q6ZU65;S250-p TLQFRQASDTEEDDI 0.443781954147912 0.0520896383681692 0.101666666666667 0.234666666666667 6.50189328964118 17.123554612213 0.101666666666667 0.234666666666667 0.223774538963232 0.0193929795181506 1.37350842874443 3.28448416920986 Q6ZU65 UBN2 Q6ZU65.S250.p_UBN2 Q6ZU65_S250sT252t_2_2_250_252 Q6ZU65 Q6ZU65|Q6ZU65-2 Ubinuclein-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11524.11524.2 12.91 12.91 7.436 3 2 2 0 1163.9927 2167.0403 S250s T252t TMT10 248 (R) QAsDtEEDDITDNQK (H) QAS(0.99)DT(0.99)EEDDIT(0.0)DNQK K:TMT10,s:Phosphorylated S,t:Phosphorylated T UBN2 146713.5 6 9 1034.1 185.79 HUMAN 1 6.5019 17.1236 TLQFRQASESEDDFI-p Q9NPG3;S173-p TLQFRQASESEDDFI 0.421053324853859 0.0599204784084767 0.120333333333333 0.234666666666667 6.92634485111254 16.2878112358895 0.120333333333333 0.234666666666667 0.202938999471822 0.0235081729091627 1.44811401012253 3.12139501616465 Q9NPG3 UBN1 Q9NPG3.S173.p_UBN1 Q9NPG3_S173s _1_1_173_173 Q9NPG3 Q9NPG3|Q9NPG3-2 Ubinuclein-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16396.16396.2 11.44 11.44 1.119 2 1 1 0 903.9319 1726.89 S173s TMT10 171 (R) QAsESEDDFIK (E) QAS(0.99)ES(0.0)EDDFIK K:TMT10,s:Phosphorylated S UBN1 122088.8 4 1 1087.1 179.43 HUMAN 1 6.9263 16.2878 TLQQHQETPKKKTGY-p Q7Z417;T87-p TLQQHQETPKKKTGY 0.108078410418423 0.00112205987963851 -0.655333333333333 -1.153 20.3263721894468 49.2931912261715 -0.655333333333334 -1.153 0.00927604359527989 1.17674097827169e-05 -3.94934608546267 -15.2192358281043 Q7Z417 NUFIP2 Q7Z417.T87.p_NUFIP2 Q7Z417_T87t _1_1_87_87 Q7Z417 Q7Z417|Q7Z417-2 Nuclear fragile X mental retardation-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3704.3704.4 8.09 8.09 8.092 2 1 1 0 471.9988 1805.007 T87t TMT10 79 (K) HTLQQHQEtPK (K) HT(0.0)LQQHQET(0.99)PK K:TMT10,t:Phosphorylated T NUFIP2 76176.8 1 1 304.1 375.48 HUMAN 1 -20.3264 -49.2932 TLRERLLSVQQDFTS-p Q96EV8;S11-p TLRERLLSVQQDFTS 0.653486479968959 0.0392966409600179 0.0673333333333333 0.392 3.46519202321032 18.8663869318602 0.0673333333333333 0.392 0.450278071812833 0.012982588949253 0.813412935592794 3.6366179699351 Q96EV8 DTNBP1 Q96EV8.S11.p_DTNBP1 Q96EV8_S11s _1_1_11_11 Q96EV8 Q96EV8|A6NFV8|Q96EV8-2|D6RCT8|D6RAX1 Dysbindin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29865.29865.3 12.07 12.07 3.603 3 1 1 0 658.6959 1894.105 S11s TMT10 9 (R) LLsVQQDFTSGLK (T) LLS(0.99)VQQDFT(0.0)S(0.0)GLK K:TMT10,s:Phosphorylated S DTNBP1 39834.6 1 1 3472.1 50.17 HUMAN 1 3.4652 18.8664 TLRFSLCSDNLEGIS-p Q14C86-6;S569-p TLRFSLCSDNLEGIS 0.318436709095685 0.359815257298188 -0.144666666666667 0.11 9.3046221751334 5.88900487977515 -0.144666666666667 0.11 0.117364778234451 0.257691154972929 -1.86110821483695 1.26446978766015 Q14C86 GAPVD1 Q14C86.6.S569.p_GAPVD1 Q14C86-6_S569s _1_1_569_569 Q14C86-6 Q14C86-6|Q14C86-2|Q14C86-5|Q14C86-3|B4DGD8|A0A0A0MQV8 Isoform 6 of GTPase-activating protein and VPS9 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23124.23124.3 12.96 12.96 4.304 4 1 1 0 764.345 2211.0549 S569s TMT10 565 (R) FSLCsDNLEGISEGPSNR (S) FS(0.0)LCS(0.99)DNLEGIS(0.0)EGPS(0.0)NR C:Carbamidomethylation,s:Phosphorylated S GAPVD1 167648.8 2 6 268.1 394.98 HUMAN 1 -9.3046 5.889 TLRGQRQSIIVAASS-p Q9Y4F1-2;S864-p TLRGQRQSIIVAASS 0.114291832596307 0.00964139024199053 0.297333333333333 0.476 19.6312892624454 28.4174360145489 0.297333333333333 0.476 0.0108860687755055 0.00143964826618927 3.80026408521084 5.95591557953774 Q9Y4F1 FARP1 Q9Y4F1.2.S864.p_FARP1 Q9Y4F1-2_S864s _1_1_864_864 Q9Y4F1-2 Q9Y4F1-2|C9JME2 Isoform 2 of FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7434.7434.3 10.93 10.93 4.463 3 1 1 0 561.303 1601.9285 S864s TMT10 860 (R) GQRQsIIVAASSR (S) GQRQS(0.99)IIVAAS(0.0)S(0.0)R s:Phosphorylated S FARP1 122909.6 2 38 147.2 514.5 HUMAN 1 19.6313 28.4174 TLRPRQLSISHFKSL-p Q8WVM0;S296-p TLRPRQLSISHFKSL 0.821525929384338 0.111187126701665 0.0346666666666667 0.24 1.64270922736577 12.5942628954747 0.0346666666666667 0.24 0.685060736720295 0.0550267306478087 0.428138509019388 2.43691836594637 Q8WVM0 TFB1M Q8WVM0.S296.p_TFB1M Q8WVM0_S296s _1_1_296_296 Q8WVM0 Q8WVM0 Dimethyladenosine transferase 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17638.17638.3 13.41 13.41 2.722 2 1 1 0 499.9455 1417.8568 S296s TMT10 294 (R) QLsISHFK (S) QLS(0.99)IS(0.0)HFK K:TMT10,s:Phosphorylated S TFB1M 39884.5 1 1 6175.1 13.41 HUMAN 1 1.6427 12.5943 TLRSGPPSPPSTATS-p Q6ZRS2;S1859-p TLRSGPPSPPSTATS 0.888676557721384 0.385692931345055 0.0203333333333333 0.107333333333333 0.999512627539747 5.50043708724482 0.0203333333333333 0.107333333333333 0.794417380556279 0.281809929486251 0.273756170713334 1.19476439366638 Q6ZRS2 SRCAP Q6ZRS2.S1859.p_SRCAP Q6ZRS2_S1859s _1_1_1859_1859 Q6ZRS2 Q6ZRS2|Q6ZRS2-2|Q6ZRS2-3|A0A0A0MS59 Helicase SRCAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11233.11448.4 13.74 11.93 3.626 6 1 1 0 541.2704 2082.093 S1859s TMT10 1855 (R) SGPPsPPSTATSFGGPRPR (R) S(0.0)GPPS(0.99)PPS(0.0)T(0.0)AT(0.0)S(0.0)FGGPRPR s:Phosphorylated S SRCAP 345203 6 4 219.1 428.72 HUMAN 1 0.9995 5.5004 TLSALNDSDANSDVV-p Q8IXM2-2;S112-p TLSALNDSDANSDVV 0.953524163607394 0.86565467163903 0.00899999999999999 0.0173333333333333 0.406944462318544 0.88284467353336 0.00899999999999999 0.0173333333333333 0.910553679703149 0.816047676639366 0.117696299309191 0.244203751110363 Q8IXM2 C17orf49 Q8IXM2.2.S112.p_C17orf49 Q8IXM2-2_S112sS116s_2_2_112_116 Q8IXM2-2 H0YIS7|Q8IXM2-3|F8W1H0|Q8IXM2-2 Isoform 2 of Chromatin complexes subunit BAP18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27881.27881.4 24.56 19.7 3.427 5 2 2 0 1030.0112 3957.0907 S112s S116s TMT10 100 (K) QKADVTLSALNDsDANsDVVDIEGLGETPPAK (K) QKADVT(0.0)LS(0.0)ALNDS(0.99)DANS(0.99)DVVDIEGLGET(0.0)PPAK K:TMT10,s:Phosphorylated S BAP18 13957.6 5 7 617.1 261.02 HUMAN 1 0.4069 0.8828 TLSIKKLSPIIEDSR-p O60566-3;S684-p TLSIKKLSPIIEDSR 0.290774405968998 0.00201157797625339 -0.199333333333333 -0.854666666666667 10.1138391151404 42.1387596519024 -0.199333333333333 -0.854666666666667 0.0974128138505493 6.11116535296921e-05 -2.00149533241057 -11.1364633185144 O60566 BUB1B O60566.3.S684.p_BUB1B O60566-3_S684s _1_1_684_684 O60566-3 O60566-3 Isoform 3 of Mitotic checkpoint serine/threonine-protein kinase BUB1 beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16113.16113.2 10.88 5.69 2.196 2 1 1 0 848.4764 1615.9783 S684s TMT10 682 (K) KLsPIIEDSR (E) KLS(0.99)PIIEDS(0.0)R K:TMT10,s:Phosphorylated S BUB1B 122696.4 3 6 2392.1 85.47 HUMAN 1 -10.1138 -42.1388 TLSNSSQSELENRLH-p Q8TBA6;S585-p TLSNSSQSELENRLH 0.20368102839978 0.534037702132003 0.347 -0.071 13.3888296665007 3.66482809515558 0.347 -0.071 0.0458265363081562 0.430048255701621 2.5813737197361 -0.852357580868104 Q8TBA6 GOLGA5 Q8TBA6.S585.p_GOLGA5 Q8TBA6_S585s _1_1_585_585 Q8TBA6 Q8TBA6|Q8TBA6-2 Golgin subfamily A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30442.30442.4 9.25 5.44 1.121 7 1 1 0 827.6897 3227.7636 S585s TMT10 578 (K) TLSNSSQsELENRLHQLTETLIQK (Q) T(0.0)LS(0.0)NS(0.0)S(0.0)QS(0.99)ELENRLHQLT(0.0)ET(0.0)LIQK K:TMT10,s:Phosphorylated S GOLGA5 83080 2 8 909.1 201.86 HUMAN 1 13.3888 -3.6648 TLSPPEASPGPPAAP-p Q6NUJ5;S191-p TLSPPEASPGPPAAP 0.528682224140727 0.0771044079866245 0.123666666666667 -0.211 5.12212314962957 14.7653964100835 0.123666666666667 -0.211 0.307459336076514 0.0333780037403499 1.12639143419193 -2.8327526590859 Q6NUJ5 PWWP2B Q6NUJ5.S191.p_PWWP2B Q6NUJ5_S191s _1_1_191_191 Q6NUJ5 Q6NUJ5|Q6NUJ5-2 PWWP domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13143.13162.3 11.28 11.28 3.492 4 1 1 0 647.662 1861.0017 S191s TMT10 183 (K) STLSPPEAsPGPPAAPR (A) S(0.0)T(0.0)LS(0.0)PPEAS(0.99)PGPPAAPR s:Phosphorylated S PWWP2B 64650.6 1 3 2283.1 89.78 HUMAN 1 5.1221 -14.7654 TLSSTGYSPGTRKRK-p Q9C0H5-2;S488-p TLSSTGYSPGTRKRK 0.327770976645339 0.972894230536863 -0.273333333333333 0.00433333333333334 9.05977817705738 0.168419119339187 -0.273333333333333 0.00433333333333335 0.124171572861527 0.961962379763009 -1.81871140927387 0.0499346491610652 Q9C0H5 ARHGAP39 Q9C0H5.2.S488.p_ARHGAP39 Q9C0H5-2_S488s _1_1_488_488 Q9C0H5-2 Q9C0H5-2 Isoform 2 of Rho GTPase-activating protein 39 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18622.18622.5 28.33 28.33 1.644 12 1 1 0 888.6284 4359.1352 S488s TMT10 458 (R) HSQPPTPLPQAQEDAMSWSSQQDTLSSTGYsPGTRK (R) HS(0.0)QPPT(0.0)PLPQAQEDAMS(0.0)WS(0.0)S(0.0)QQDT(0.0)LS(0.0)S(0.0)T(0.0)GY(0.0)S(0.99)PGT(0.0)RK K:TMT10,s:Phosphorylated S ARHGAP39 126053.9 3 10 910.1 201.84 HUMAN 1 -9.0598 0.1684 TLSYNRHSLTADTSE-p Q9UBY0;S623-p TLSYNRHSLTADTSE 0.301881046336352 0.0850460879017259 -0.244 -0.385 9.75281074792244 14.1657321966347 -0.244 -0.385 0.105856839941596 0.0383201129348698 -1.93879545936484 -2.72174204130545 Q9UBY0 SLC9A2 Q9UBY0.S623.p_SLC9A2 Q9UBY0_S623s _1_1_623_623 Q9UBY0 Q9UBY0 Sodium/hydrogen exchanger 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7697.7697.3 12.55 8.98 2.292 7 1 1 0 720.6826 2080.0621 S623s TMT10 616 (R) TLSYNRHsLTADTSER (Q) T(0.0)LS(0.0)Y(0.0)NRHS(0.99)LT(0.0)ADT(0.0)S(0.0)ER s:Phosphorylated S SLC9A2 92088.6 1 4 1290.1 157.7 HUMAN 1 -9.7528 -14.1657 TLTAQKASEASKVHN-p Q96QT4;S1255-p TLTAQKASEASKVHN 0.347648543667197 0.0196882627335473 -0.174333333333333 0.431333333333333 8.52430270991501 23.4129731663366 -0.174333333333333 0.431333333333334 0.140465519266332 0.00455724821357485 -1.72601468680584 4.64741181139909 Q96QT4 TRPM7 Q96QT4.S1255.p_TRPM7 Q96QT4_S1255s _1_1_1255_1255 Q96QT4 Q96QT4|H0YLN8 Transient receptor potential cation channel subfamily M member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9826.9826.3 12.08 12.08 2.207 4 1 1 0 668.0433 1922.1526 S1255s TMT10 1248 (K) TLTAQKAsEASK (V) T(0.0)LT(0.0)AQKAS(0.99)EAS(0.0)K K:TMT10,s:Phosphorylated S TRPM7 214804.2 2 2 965.1 193.95 HUMAN 1 -8.5243 23.413 TLTDEVNSPDSDRRD-p Q8TAQ2;S283-p TLTDEVNSPDSDRRD 0.370314865600616 0.409484853769781 0.136 -0.078 7.99949050722462 5.15960347933299 0.136 -0.078 0.158507913518714 0.304817328202591 1.63507222609328 -1.13299220531105 Q8TAQ2 SMARCC2 Q8TAQ2.S283.p_SMARCC2 Q8TAQ2_S283s _1_1_283_283 Q8TAQ2 F8VXC8|Q8TAQ2|Q8TAQ2-3|Q8TAQ2-2 SWI/SNF complex subunit SMARCC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.4108.4108.2 17.67 17.67 3.126 4 1 1 0 842.8626 1604.7511 S283s Hydrogen 276 (K) TLTDEVNsPDSDRR (D) T(0.0)LT(0.0)DEVNS(0.99)PDS(0.0)DRR s:Phosphorylated S SMARCC2 133276.4 13 2 499.1 292.05 HUMAN 1 7.9995 -5.1596 TLTLRAASPPRAPGT-p Q96AC6;S612-p TLTLRAASPPRAPGT 0.594226936638701 0.0668302165643132 0.0726666666666667 0.218 4.16814200832061 15.6285601072866 0.0726666666666667 0.218 0.382988557822771 0.0273617574830294 0.949136709790977 2.99513473510582 Q96AC6 KIFC2 Q96AC6.S612.p_KIFC2 Q96AC6_S612s _1_1_612_612 Q96AC6 Q96AC6 Kinesin-like protein KIFC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18199.18199.4 18.52 18.52 2.936 4 1 1 0 664.0974 2573.3997 S612s TMT10 610 (R) AAsPPRAPGTAGTLHLVDLAGSER (A) AAS(0.99)PPRAPGT(0.0)AGT(0.0)LHLVDLAGS(0.0)ER s:Phosphorylated S KIFC2 90944.5 2 1 4675.1 28.11 HUMAN 1 4.1681 15.6286 TLTPLQESPVISKDQ-p Q9P206-3;S672-p TLTPLQESPVISKDQ 0.33738946325448 0.0944129586072945 -0.195 0.280666666666667 8.78971886575392 13.5559512721883 -0.195 0.280666666666667 0.132138116911523 0.0440965764055794 -1.77196293901481 2.61023957342416 Q9P206 KIAA1522 Q9P206.3.S672.p_KIAA1522 Q9P206-3_S672s _1_1_672_672 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30363.30363.5 24.69 24.69 2.37 12 1 1 0 1025.5259 5043.7294 S672s TMT10 631 (R) SPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQEsPVISK (D) S(0.0)PNPAAPALAAPAVVPGPVS(0.0)T(0.0)T(0.0)DAS(0.0)PQS(0.0)PPT(0.0)PQT(0.0)T(0.0)LT(0.0)PLQES(0.99)PVIS(0.0)K K:TMT10,s:Phosphorylated S KIAA1522 108782.6 1 31 62.1 704.36 HUMAN 1 -8.7897 13.556 TLTRDYNSLTRSEHS-p P16144;S1494-p TLTRDYNSLTRSEHS 0.466667919827382 0.0147793875061614 0.123666666666667 -0.595333333333333 6.10836630965419 25.3475195051174 0.123666666666667 -0.595333333333333 0.244998468196613 0.00291909379313419 1.30384522133244 -5.12582078557568 P16144 ITGB4 P16144.S1494.p_ITGB4 P16144_S1494s _1_1_1494_1494 P16144 P16144|P16144-3|P16144-2|P16144-4 Integrin beta-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8624.8624.2 7.69 3.25 1.565 3 1 1 0 589.2762 1097.5789 S1494s TMT10 1491 (R) DYNsLTR (S) DY(0.0)NS(0.99)LT(0.0)R s:Phosphorylated S ITGB4 205872.1 1 7 708.1 238.91 HUMAN 1 6.1084 -25.3475 TLTRRSISQQKSGVS-p Q9UKV3;S983-p TLTRRSISQQKSGVS 0.0683636000573323 0.0608785522217955 0.503333333333333 0.466 25.1334622968349 16.1932563110907 0.503333333333333 0.466 0.00306657626755177 0.0240256070048394 5.07765828558539 3.10316041100893 Q9UKV3 ACIN1 Q9UKV3.S983.p_ACIN1 Q9UKV3_S983s _1_1_983_983 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4|Q9UKV3-2|Q9UKV3-3 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4524.4524.3 7.76 7.76 2.397 2 1 1 0 462.2626 1304.8051 S983s TMT10 980 (R) RSIsQQK (S) RS(0.0)IS(0.99)QQK K:TMT10,s:Phosphorylated S ACIN1 152258.2 1 36 32.2 899.18 HUMAN 1 25.1335 16.1933 TLTVWKKSPEKNERH-p P19525;S542-p TLTVWKKSPEKNERH 0.224767265517543 0.00505942546199101 -0.795 0.666 12.4545782011912 33.458150288733 -0.795 0.666 0.0568253579238677 0.000451008753572131 -2.41323345472319 7.54348196635242 P19525 EIF2AK2 P19525.S542.p_EIF2AK2 P19525_S542s _1_1_542_542 P19525 P19525|P19525-2 Interferon-induced, double-stranded RNA-activated protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16523.16523.4 7.87 3.1 3.379 3 1 1 0 579.0989 2233.409 S542s TMT10 535 (R) TLTVWKKsPEK (N) T(0.0)LT(0.0)VWKKS(0.99)PEK K:TMT10,s:Phosphorylated S EIF2AK2 62549.6 1 5 2106.1 97.45 HUMAN 1 -12.4546 33.4582 TLVAAANSLDNLCRM-p Q9Y4A5;S3844-p TLVAAANSLDNLCRM 0.902578934847365 0.765483546191816 0.031 0.0723333333333334 0.875090659666309 1.60380132430443 0.031 0.0723333333333334 0.817505972197867 0.691225685016855 0.242245917139472 0.419111204160839 Q9Y4A5 TRRAP Q9Y4A5.S3844.p_TRRAP Q9Y4A5_S3844s _1_1_3844_3844 Q9Y4A5 Q9Y4A5|F2Z2U4|Q9Y4A5-2 Transformation/transcription domain-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25702.25702.3 19.04 17.26 19.04 2 1 1 0 680.6768 1960.0483 S3844s TMT10 3835 (K) VNTLVAAANsLDNLCR (M) VNT(0.0)LVAAANS(0.99)LDNLCR C:Carbamidomethylation,s:Phosphorylated S TRRAP 442042.7 1 7 1141.1 173.21 HUMAN 1 0.8751 1.6038 TLVGDKRSDPEQNEK-p Q6PL18;S1139-p TLVGDKRSDPEQNEK 0.511272956349633 0.00117915701678604 0.103333333333333 -1.128 5.38534856214546 48.5128216099514 0.103333333333333 -1.128 0.289377755489423 1.40837348128342e-05 1.17422990506259 -14.7129443707194 Q6PL18 ATAD2 Q6PL18.S1139.p_ATAD2 Q6PL18_S1139s _1_1_1139_1139 Q6PL18 Q6PL18|A0A0B4J211 ATPase family AAA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7801.7801.4 15.29 9.9 4.415 3 1 1 0 703.8649 2732.4782 S1139s TMT10 1129 (K) QNSTLVGDKRsDPEQNEK (L) QNS(0.0)T(0.0)LVGDKRS(0.99)DPEQNEK K:TMT10,s:Phosphorylated S ATAD2 159920.6 5 14 266.1 395.28 HUMAN 1 5.3853 -48.5128 TLVGENVSEEEAQGI-p F8VWL3;S83-p TLVGENVSEEEAQGI 0.299833271733525 0.729961018828838 0.188 0.0343333333333333 9.83231296315119 1.88347389576454 0.188 0.0343333333333333 0.10393664731777 0.648115802170331 1.95259168446786 0.482784142913497 F8VWL3 NotFound F8VWL3.S83.p_NotFound F8VWL3_S83s_1_1_83_83 F8VWL3 F8VWL3|E9PJX4|B7Z493 FYVE, RhoGEF and PH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23785.23785.5 12.22 12.22 1.118 8 1 1 0 834.0184 4085.1225 S83s N91n TMT10 63 (K) IALVPPCSTSSTTTLVGENVsEEEAQGInGNRPAK (H) IALVPPCS(0.0)T(0.0)S(0.0)S(0.0)T(0.0)T(0.0)T(0.0)LVGEN(0.0)VS(0.99)EEEAQGIN(0.99)GN(0.0)RPAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated FGD4 102143.9 4 1 2482.1 81.7 HUMAN 1 9.8323 1.8835 TLVQTKGTGASGSFK-p P16402;T100-p TLVQTKGTGASGSFK 0.240543868700249 0.162528694395999 0.192 -0.186333333333333 11.8267112482007 10.3735383803202 0.192 -0.186333333333333 0.0656642329072519 0.0917584696897964 2.30163521547966 -2.04582580396201 P16402 HIST1H1D P16402.T100.p_HIST1H1D P16402_T100t _1_1_100_100 P16402 P16401|P16402|P10412|Q02539|P16403 Histone H1.3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14340.14340.3 12.3 12.3 2.128 5 1 1 0 769.4292 2226.3061 T100t TMT10 92 (K) GTLVQTKGtGASGSFK (L) GT(0.0)LVQT(0.0)KGT(0.99)GAS(0.0)GS(0.0)FK K:TMT10,t:Phosphorylated T HIST1H1D 22349.5 2 20 738.1 234.77 HUMAN 1 11.8267 -10.3735 TLVSKAISAPLLGSS-p O15018;S1031-p TLVSKAISAPLLGSS 0.551730002887042 0.0699771423651989 0.118 0.3 4.76624825635604 15.3595324660098 0.118 0.3 0.333714574587476 0.0291103048434196 1.06104242354128 2.94417977396142 O15018 PDZD2 O15018.S1031.p_PDZD2 O15018_S1031s _1_1_1031_1031 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36988.36988.4 29.78 25.04 8.024 8 1 1 0 1107.8024 4348.2158 S1031s TMT10 1029 (K) AIsAPLLGSSVDLEESIPEGMVDAASYAANLTDSAEAPK (G) AIS(0.99)APLLGS(0.0)S(0.0)VDLEES(0.0)IPEGMVDAAS(0.0)Y(0.0)AANLT(0.0)DS(0.0)AEAPK K:TMT10,s:Phosphorylated S PDZD2 304146 2 13 85.1 628.64 HUMAN 1 4.7662 15.3595 TLYDIAHTPGVAADL-p P40926;T61-p TLYDIAHTPGVAADL 0.562984721594971 0.255021580489068 0.116666666666667 0.158666666666667 4.59708924354193 7.81730709137761 0.116666666666667 0.158666666666667 0.346969320553559 0.165298643976746 1.02967641777999 1.60295556188225 P40926 MDH2 P40926.T61.p_MDH2 P40926_T61t _1_1_61_61 P40926 P40926|P40926-2 Malate dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27377.27377.4 16.86 16.86 4.116 5 1 1 0 726.6401 2823.5657 T61t TMT10 53 (R) LTLYDIAHtPGVAADLSHIETK (A) LT(0.0)LY(0.0)DIAHT(0.99)PGVAADLS(0.0)HIET(0.0)K K:TMT10,t:Phosphorylated T MDH2 35959.1 1 2 2175.1 94.5 HUMAN 1 4.5971 7.8173 TLYPRSFSVEGREIP-p Q6ZNL6;S552-p TLYPRSFSVEGREIP 0.132590951458851 0.038216839484939 -0.272666666666667 -0.498666666666667 18.1121382883251 19.0460913146846 -0.272666666666667 -0.498666666666667 0.0154449380674843 0.0124563518913404 -3.48499554002519 -3.67392536425079 Q6ZNL6 FGD5 Q6ZNL6.S552.p_FGD5 Q6ZNL6_S552s _1_1_552_552 Q6ZNL6 Q6ZNL6|B7ZM68 FYVE, RhoGEF and PH domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.10003.10003.2 9.22 4.31 2.831 2 1 1 0 545.7605 1010.5468 S552s TMT10 550 (R) SFsVEGR (E) S(0.0)FS(0.99)VEGR s:Phosphorylated S FGD5 161828 1 4 1305.1 156.12 HUMAN 1 -18.1121 -19.0461 TMAEPSASPSKRRDS-p Q8IXQ3;S69-p TMAEPSASPSKRRDS 0.247942065088286 0.000952253650599092 -0.194 -1.32066666666667 11.5707669896155 53.6476863575311 -0.194 -1.32066666666667 0.0696503496631497 4.31749023761878e-06 -2.25642369005853 -18.36774598884 Q8IXQ3 C9orf40 Q8IXQ3.S69.p_C9orf40 Q8IXQ3_S69s _1_1_69_69 Q8IXQ3 Q8IXQ3 Uncharacterized protein C9orf40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10171.10171.4 21.07 21.07 1.42 4 1 1 0 629.0923 2433.3739 S69s TMT10 56 (K) RKIDAGTMAEPSAsPSK (R) RKIDAGT(0.0)MAEPS(0.0)AS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S C9orf40 21120 16 1 2249.1 91.42 HUMAN 1 -11.5708 -53.6477 TMAKLLETPISSKSQ-p O94986;T1351-p TMAKLLETPISSKSQ 0.374713726213654 0.00275651058102969 0.136333333333333 -1.01666666666667 7.89357203543828 38.7554381379345 0.136333333333333 -1.01666666666667 0.162421230531128 0.000133185267159493 1.61669263252834 -9.58542467550042 O94986 CEP152 O94986.T1351.p_CEP152 O94986_T1351t _1_1_1351_1351 O94986 O94986|O94986-3|O94986-2 Centrosomal protein of 152 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20371.20371.3 7.3 7.3 7.302 3 1 1 0 509.2921 1445.898 T1351t TMT10 1348 (K) LLEtPISSK (S) LLET(0.99)PIS(0.0)S(0.0)K K:TMT10,t:Phosphorylated T CEP152 198019.2 2 7 1197.1 167.32 HUMAN 1 7.8936 -38.7554 TMALAAPSSPTPESP-p Q9NQS7;S142-p TMALAAPSSPTPESP 0.861796257771592 0.101911555742109 -0.026 -0.18 1.26362577999603 13.1005492797228 -0.026 -0.18 0.74754513937694 0.0489716877857936 -0.338758767583896 -2.52780149753115 Q9NQS7 INCENP Q9NQS7.S142.p_INCENP Q9NQS7_S142sS143s_2_2_142_143 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30404.30404.4 18.48 18.48 1.142 7 2 2 0 805.152 3057.6365 S142s S143s TMT10 127 (R) AAAAAAAATMALAAPssPTPESPTMLTK (K) AAAAAAAAT(0.0)MALAAPS(0.99)S(0.99)PT(0.0)PES(0.0)PT(0.0)MLT(0.0)K K:TMT10,s:Phosphorylated S INCENP 105826.3 11 25 138.1 524.38 HUMAN 1 -1.2636 -13.1005 TMALQYGSESEEDAA-p Q86U86;S353-p TMALQYGSESEEDAA 0.915699707666143 0.0456930495418093 0.0163333333333333 0.245666666666667 0.749001086083478 17.9305342082949 0.0163333333333333 0.245666666666667 0.841588691878416 0.016104475282766 0.209676095086028 3.44541343530651 Q86U86 PBRM1 Q86U86.S353.p_PBRM1 Q86U86_S353s _1_1_353_353 Q86U86 Q86U86|Q86U86-8|Q86U86-2|Q86U86-9|Q86U86-3|Q86U86-7|Q86U86-4|Q86U86-5|Q86U86-6 Protein polybromo-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32865.33476.4 26.36 26.36 1.108 5 1 1 0 695.0867 2697.3603 S353s TMT10 342 (R) LSAITMALQYGsESEEDAALAAAR (Y) LS(0.0)AIT(0.0)MALQY(0.0)GS(0.99)ES(0.0)EEDAALAAAR s:Phosphorylated S PBRM1 194199.5 12 7 194.1 462.54 HUMAN 1 0.749 17.9305 TMFAQVESDDEEAKN-p Q9NW82;S638-p TMFAQVESDDEEAKN 0.950466896477293 0.76132917610694 -0.01 0.031 0.436368597392422 1.63765506867894 -0.01 0.031 0.90440538647563 0.685858449173371 -0.125835465711916 0.426927616071201 Q9NW82 WDR70 Q9NW82.S638.p_WDR70 Q9NW82_S638s _1_1_638_638 Q9NW82 Q9NW82 WD repeat-containing protein 70 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21754.21754.4 22.19 22.19 10.286 2 1 1 0 788.3797 3070.5282 S638s TMT10 631 (K) TMFAQVEsDDEEAKNEPEWK (K) T(0.0)MFAQVES(0.99)DDEEAKNEPEWK K:TMT10,s:Phosphorylated S WDR70 73941.6 16 3 2493.1 81.24 HUMAN 1 -0.4364 1.6377 TMGRSQGSPMDPMVM-p Q8NFD5-3;S516-p TMGRSQGSPMDPMVM 0.917602628797134 0.024488748385605 0.016 0.335 0.72977265969562 21.9339473173501 0.016 0.335 0.845323094163604 0.00640627043788393 0.20464996154232 4.30230911594503 Q8NFD5 ARID1B Q8NFD5.3.S516.p_ARID1B Q8NFD5-3_S516s _1_1_516_516 Q8NFD5-3 Q8NFD5-3|Q8NFD5-2 Isoform 3 of AT-rich interactive domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18949.18949.3 14.21 14.21 2.684 2 1 1 0 615.9638 1765.9051 S516s TMT10 513 (R) SQGsPMDPMVMK (R) S(0.0)QGS(0.99)PMDPMVMK K:TMT10,s:Phosphorylated S ARID1B 242543.1 4 5 656.1 253.59 HUMAN 1 0.7298 21.9339 TMGSRSESLSNCSIG-p Q92625;S647-p TMGSRSESLSNCSIG 0.710488445890013 0.989213653735162 -0.071 0.00166666666666669 2.7917549962553 0.0706586603481543 -0.071 0.00166666666666668 0.525804744272448 0.983861879837556 -0.677788421513633 0.0211770936390754 Q92625 ANKS1A Q92625.S647.p_ANKS1A Q92625_S647s _1_1_647_647 Q92625 Q92625 Ankyrin repeat and SAM domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12167.12167.2 16.27 16.27 2.228 4 1 1 0 860.4222 1639.8725 S647s TMT10 645 (R) SEsLSNCSIGK (K) S(0.0)ES(0.99)LS(0.0)NCS(0.0)IGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANKS1A 124075.6 15 6 709.1 238.85 HUMAN 1 -2.7918 0.0707 TMGVPPDSPQMTPGK-p Q4AC94;S554-p TMGVPPDSPQMTPGK 0.730031357534783 0.467053627263947 0.072 -0.244666666666667 2.59174291644325 4.40783268254528 0.072 -0.244666666666667 0.550586689871753 0.362423818467833 0.636196716721346 -0.994146380107495 Q4AC94 C2CD3 Q4AC94.S554.p_C2CD3 Q4AC94_S554s _1_1_554_554 Q4AC94 Q4AC94|Q4AC94-3|Q4AC94-1|Q4AC94-4|Q4AC94-2 C2 domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25191.25191.4 18.03 15.19 3.915 3 1 1 0 727.3987 2826.6076 S554s TMT10 543 (R) IIIETMGVPPDsPQMTPGKK (S) IIIET(0.0)MGVPPDS(0.99)PQMT(0.0)PGKK K:TMT10,s:Phosphorylated S C2CD3 262780.3 3 4 722.1 237.14 HUMAN 1 2.5917 -4.4078 TMHRNKSSLLFKESE-p Q8TF40;S594-p TMHRNKSSLLFKESE 0.148266672319898 0.343881984312331 -0.535333333333333 0.0963333333333334 16.7836172901606 6.14132894450971 -0.535333333333333 0.0963333333333334 0.0209719237960223 0.243145986660556 -3.22013699616894 1.30938291904455 Q8TF40 FNIP1 Q8TF40.S594.p_FNIP1 Q8TF40_S594s _1_1_594_594 Q8TF40 Q8TF40|Q8TF40-3|J3KNG8 Folliculin-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17942.17942.3 9.6 9.6 1.367 2 1 1 0 568.6729 1624.0401 S594s TMT10 591 (R) NKSsLLFK (E) NKS(0.0)S(0.99)LLFK K:TMT10,s:Phosphorylated S FNIP1 132549.9 1 13 310.1 372.19 HUMAN 1 -16.7836 6.1413 TMKGEEKSPKTKKDK-p Q96T23;S570-p TMKGEEKSPKTKKDK 0.953405971129685 0.00133342802810582 0.0103333333333333 -1.22766666666667 0.408689577775918 46.7561600360514 0.0103333333333333 -1.22766666666667 0.910187867528737 2.110493390482e-05 0.11818030081062 -13.6315404739583 Q96T23 RSF1 Q96T23.S570.p_RSF1 Q96T23_S570s _1_1_570_570 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11370.11370.5 14.11 14.11 1.122 7 1 1 0 614.3253 2987.6199 S570s TMT10 554 (K) TALSSTESCTMKGEEKsPK (T) T(0.0)ALS(0.0)S(0.0)T(0.0)ES(0.0)CT(0.0)MKGEEKS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RSF1 165358.1 7 7 39.1 857.38 HUMAN 1 0.4087 -46.7562 TMKGKERSPVKAKRS-p Q96T37;S51-p TMKGKERSPVKAKRS 0.0990612726298986 0.0990132716732784 1.07866666666667 0.195 21.2493234130074 13.2722409193994 1.07866666666667 0.195 0.00750011044386213 0.0470734369135433 4.15234719917466 2.55880175424659 Q96T37 RBM15 Q96T37.S51.p_RBM15 Q96T37_S51s _1_1_51_51 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4514.4514.4 7.65 2.74 99 1 1 1 0 417.7512 1588.0149 S51s TMT10 47 (K) GKERsPVK (A) GKERS(1.0)PVK K:TMT10,s:Phosphorylated S RBM15 107414.9 1 2 55.1 724.11 HUMAN 1 21.2493 13.2722 TMKKFEDSEKAKKPV-p P08240;S142-p TMKKFEDSEKAKKPV 0.508867966676417 0.00155017741389709 -0.109 -0.921333333333333 5.41604954840833 45.201084394182 -0.109 -0.921333333333333 0.287339310411076 3.01919775980622e-05 -1.17978447563417 -12.7377173737828 P08240 SRPR P08240.S142.p_SRPR P08240_S142s _1_1_142_142 P08240 P08240|P08240-2 Signal recognition particle receptor subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9246.9246.3 8.06 8.06 99 1 1 1 0 550.6298 1569.9091 S142s TMT10 138 (K) KFEDsEK (A) KFEDS(1.0)EK K:TMT10,s:Phosphorylated S SRPRA 70266.4 1 1 1857.1 110.87 HUMAN 1 -5.416 -45.2011 TMLEDSVSPKKSTVL-p Q9Y490;S425-p TMLEDSVSPKKSTVL 0.556540113897979 0.0028863261210622 -0.0983333333333333 -0.803 4.69960070162946 38.401246703537 -0.0983333333333333 -0.803 0.338875311529175 0.000144502489643257 -1.04870918356208 -9.43500678592173 Q9Y490 TLN1 Q9Y490.S425.p_TLN1 Q9Y490_S425s _1_1_425_425 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17700.17700.5 25.84 25.84 1.272 5 1 1 0 733.1767 3581.8815 S425s TMT10 405 (K) SKDHFGLEGDEESTMLEDSVsPKK (S) S(0.0)KDHFGLEGDEES(0.0)T(0.0)MLEDS(0.0)VS(0.99)PKK K:TMT10,s:Phosphorylated S TLN1 271930.4 6 5 267.1 395.2 HUMAN 1 -4.6996 -38.4012 TMLLLSRSPEAQPKT-p P55265-4;S868-p TMLLLSRSPEAQPKT 0.718244338748863 0.00526062627901912 -0.0593333333333333 -0.575 2.71131230797718 33.1316841139299 -0.0593333333333333 -0.575 0.535634780253709 0.000486218622511891 -0.661140820181357 -7.43107974408943 P55265 ADAR P55265.4.S868.p_ADAR P55265-4_S868s _1_1_868_868 P55265-4 P55265-4|P55265-5 Isoform 4 of Double-stranded RNA-specific adenosine deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19020.19020.2 15.44 11.59 2.092 3 1 1 0 1055.0795 2029.188 S868s TMT10 861 (R) TMLLLSRsPEAQPK (T) T(0.0)MLLLS(0.0)RS(0.99)PEAQPK K:TMT10,s:Phosphorylated S ADAR 142147.5 7 16 584.1 265.43 HUMAN 1 -2.7113 -33.1317 TMPKFAFSSEDEGVG-p O60307;S792-p TMPKFAFSSEDEGVG 0.123350251698765 0.0703462000072235 -0.289666666666667 -0.219666666666667 18.9202150456359 15.3284410129702 -0.289666666666667 -0.219666666666667 0.0128226708823464 0.0293194553694429 -3.65095303054758 -2.93831146281428 O60307 MAST3 O60307.S792.p_MAST3 O60307_S792sS793s_2_2_792_793 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24796.24796.3 13.42 13.42 99 2 2 2 0 789.6951 2207.1385 S792s S793s TMT10 789 (K) FAFssEDEGVGPGPAGPK (R) FAFS(1.0)S(1.0)EDEGVGPGPAGPK K:TMT10,s:Phosphorylated S MAST3 143933.5 1 35 121.3 549.41 HUMAN 1 -18.9202 -15.3284 TMPKHSPSPVLNRAS-p Q9NWH7;S354-p TMPKHSPSPVLNRAS 0.305809269646264 0.058745777738984 0.187666666666667 0.366333333333333 9.64390238609331 16.3983409040358 0.187666666666667 0.366333333333333 0.1085449846073 0.0229174297942168 1.91990497219296 3.14276493110963 Q9NWH7 SPATA6 Q9NWH7.S354.p_SPATA6 Q9NWH7_S354s _1_1_354_354 Q9NWH7 Q9NWH7|A8MU33|Q9NWH7-2 Spermatogenesis-associated protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4993.4993.3 10.13 10.13 1.839 2 1 1 0 439.229 1235.7058 S354s TMT10 351 (K) HSPsPVLNR (A) HS(0.0)PS(0.99)PVLNR s:Phosphorylated S SPATA6 57015.1 2 1 6688.1 10.13 HUMAN 1 9.6439 16.3983 TMPRAVGSPLCVPAR-p Q9NYZ3;S536-p TMPRAVGSPLCVPAR 0.775461946756303 0.0285982899438594 0.0543333333333333 -0.307333333333333 2.11516863403475 20.9073863558082 0.0543333333333333 -0.307333333333333 0.614445172691974 0.008114492523086 0.534158552703362 -4.07241492373761 Q9NYZ3 GTSE1 Q9NYZ3.S536.p_GTSE1 Q9NYZ3_S536s _1_1_536_536 Q9NYZ3 Q9NYZ3 G2 and S phase-expressed protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14467.14467.2 16.36 8.29 99 1 1 1 0 718.3719 1355.7667 S536s TMT10 533 (R) AVGsPLCVPAR (R) AVGS(1.0)PLCVPAR C:Carbamidomethylation,s:Phosphorylated S GTSE1 77156.9 3 12 271.1 394.28 HUMAN 1 2.1152 -20.9074 TMRMLSSTPPTPIAC-p O75376-2;T2293-p TMRMLSSTPPTPIAC 0.814399806622497 0.0504260799938781 0.039 0.236 1.7103383229022 17.3385693501044 0.039 0.236 0.674475482846266 0.0184562330300886 0.443653970014642 3.32702076282129 O75376 NCOR1 O75376.2.T2293.p_NCOR1 O75376-2_T2293t_1_1_2293_2293 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15895.15895.3 15.18 15.18 1.17 5 1 1 0 1057.1771 3073.5509 M2289m T2293t TMT10 2289 (R) mLSStPPTPIACAPSAVNQAAPHQQNR (I) M(1.0)LS(0.0)S(0.0)T(0.99)PPT(0.0)PIACAPS(0.0)AVNQAAPHQQNR C:Carbamidomethylation,m:Oxidized methionine,t:Phosphorylated T NCOR1 259453.1 4 35 35.1 889.74 HUMAN 1 1.7103 17.3386 TMSEVGGSVEDLIAK-p A0A1B0GU03;S42-p TMSEVGGSVEDLIAK 0.626360563200996 0.0528810687898917 -0.081 0.313666666666667 3.77436457700268 17.0319296379717 -0.081 0.313666666666667 0.419337346094409 0.0198064679807327 -0.873745775011641 3.26643143329227 A0A1B0GU03 NotFound A0A1B0GU03.S42.p_NotFound A0A1B0GU03_S42s _1_1_42_42 A0A1B0GU03 A0A1B0GU03|A0A1B0GU92|P07339|A0A1B0GWE8|A0A1B0GVD5|A0A1B0GV23 Uncharacterized protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25178.25178.3 14.96 10.87 5.977 3 1 1 0 692.0237 1994.088 S42s TMT10 35 (R) TMSEVGGsVEDLIAK (G) T(0.0)MS(0.0)EVGGS(0.99)VEDLIAK K:TMT10,s:Phosphorylated S 63727.8 1 1 3468.1 50.24 HUMAN 1 -3.7744 17.0319 TMSPRHLSESSGKPL-p Q8IVT2;S471-p TMSPRHLSESSGKPL 0.0639703502072646 0.00259997565261951 -1.18533333333333 -0.825 25.7917599244657 39.4098161980627 -1.18533333333333 -0.825 0.00263526326170073 0.000114556142282444 -5.24714093923441 -9.86904508335787 Q8IVT2 MISP Q8IVT2.S471.p_MISP Q8IVT2_S471s _1_1_471_471 Q8IVT2 Q8IVT2 Mitotic interactor and substrate of PLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10229.10229.4 11.28 11.28 1.261 5 1 1 0 535.3018 2058.2162 S471s TMT10 469 (R) HLsESSGKPLSTK (Q) HLS(0.99)ES(0.0)S(0.0)GKPLS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S MISP 75526.3 1 15 490.1 294.31 HUMAN 1 -25.7918 -39.4098 TMTRRGSSPGSLEIP-p Q6GYQ0-2;S861-p TMTRRGSSPGSLEIP 0.330275298399303 0.679657134750731 0.164333333333333 0.043 8.99164616723564 2.29214798958375 0.164333333333333 0.043 0.1261349337052 0.589909243096311 1.80691671252579 0.572500310196752 Q6GYQ0 RALGAPA1 Q6GYQ0.2.S861.p_RALGAPA1 Q6GYQ0-2_S860sS861sS864s_3_3_860_864 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30732.31174.4 11.62 11.62 99 3 3 3 0 766.6434 2823.6547 S860s S861s S864s TMT10 858 (R) RGssPGsLEIPKDLPDILNK (Q) RGS(1.0)S(1.0)PGS(1.0)LEIPKDLPDILNK K:TMT10,s:Phosphorylated S RALGAPA1 236609.9 6 22 317.1 366.49 HUMAN 1 8.9916 2.2921 TMTVEKASPVGDGNF-p Q86YS7-3;S903-p TMTVEKASPVGDGNF 0.115316569267169 0.288015538957961 -0.472 0.131 19.5154228089493 7.1325482990612 -0.472 0.131 0.0111804097200609 0.193528606767458 -3.77571799622678 1.48377798437263 Q86YS7 C2CD5 Q86YS7.3.S903.p_C2CD5 Q86YS7-3_S903s _1_1_903_903 Q86YS7-3 Q86YS7-5|Q86YS7-4|Q86YS7-3|Q86YS7-2 Isoform 3 of C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9637.9637.2 13.28 8.11 99 1 1 1 0 664.8142 1248.6534 S903s TMT10 902 (K) AsPVGDGNFR (N) AS(1.0)PVGDGNFR s:Phosphorylated S C2CD5 117622.7 2 16 349.1 351.16 HUMAN 1 -19.5154 7.1325 TNAKRKLSDDPCPVE-p O60244;S617-p TNAKRKLSDDPCPVE 0.804218114164721 0.131583503961733 -0.0366666666666667 0.169 1.82495764821904 11.6123264627771 -0.0366666666666667 0.169 0.656907522513876 0.0689870149781477 -0.469678984427151 2.26266844261335 O60244 MED14 O60244.S617.p_MED14 O60244_S617s _1_1_617_617 O60244 O60244 Mediator of RNA polymerase II transcription subunit 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11336.11336.3 15.35 8.47 13.944 2 1 1 0 833.7925 2419.4036 S617s TMT10 615 (R) KLsDDPCPVESKK (T) KLS(0.99)DDPCPVES(0.0)KK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MED14 162087.1 13 1 1597.1 128.88 HUMAN 1 -1.825 11.6123 TNDISPESSPGVGRR-p E7ETA6;S68-p TNDISPESSPGVGRR 0.51428507339171 0.385818781347435 0.0884333333333333 0.1149 5.33295521972994 5.49852553653917 0.0884333333333333 0.1149 0.292889955486861 0.281933995658563 1.1647389583699 1.19441968600066 E7ETA6 PCM1 E7ETA6.S68.p_PCM1 E7ETA6_S65sS68s_2_2_65_68 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6|Q15154-3|E9PGW9 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9209.9666.2 10.58 10.58 1.186 4 2 2 0 1030.4746 1900.0086 S65s S68s TMT10 59 (K) RVTNDIsPEsSPGVGR (R) RVT(0.0)NDIS(0.99)PES(0.99)S(0.0)PGVGR s:Phosphorylated S PCM1 229381.8 10 57 13.1 1159.95 HUMAN 3 5.333 5.4985 TNDPPKQSPGSTSPK-p O43159;S171-p TNDPPKQSPGSTSPK 0.237912707669171 0.028031763585221 0.177333333333333 -0.303 11.9407319624556 21.0354158736319 0.177333333333333 -0.303 0.0639627023285562 0.00787876981966225 2.32182649246701 -4.10067670357922 O43159 RRP8 O43159.S171.p_RRP8 O43159_S171s _1_1_171_171 O43159 O43159|E9PPY3 Ribosomal RNA-processing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.6889.6889.5 13.76 10.34 3.505 9 1 1 0 669.155 3261.7795 S171s TMT10 161 (K) GSTTNDPPKQsPGSTSPKPPHTLSR (K) GS(0.0)T(0.0)T(0.0)NDPPKQS(0.99)PGS(0.0)T(0.0)S(0.0)PKPPHT(0.0)LS(0.0)R K:TMT10,s:Phosphorylated S RRP8 51455.6 7 4 986.1 191.95 HUMAN 1 11.9407 -21.0354 TNDSLTLSQSKSNED-p A0A0U1RRH6;S294-p TNDSLTLSQSKSNED 0.9858344442218 0.0265691199528162 0.00499999999999999 0.417333333333333 0.125255440398493 21.3879315831449 0.00499999999999996 0.417333333333333 0.971570804700368 0.00726451862707571 0.0373162963811365 4.17908908068843 A0A0U1RRH6 NotFound A0A0U1RRH6.S294.p_NotFound A0A0U1RRH6_T287tS290sS294s_3_3_287_294 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18744.18744.3 11.17 11.17 1.231 6 3 3 0 922.3937 2525.2619 T287t S290s S294s TMT10 279 (R) NSADDEELtNDsLTLsQSK (S) NS(0.0)ADDEELT(0.99)NDS(0.99)LT(0.0)LS(0.99)QS(0.0)K K:TMT10,t:Phosphorylated T,s:Phosphorylated S PHF14 109152.4 3 28 126.1 543.2 HUMAN 1 0.1253 21.3879 TNEKGTDSQAMEEEK-p Q13451;S445-p TNEKGTDSQAMEEEK 0.759298210223683 0.0204928663208863 -0.089 0.948 2.29186700438915 23.1150924443438 -0.0890000000000001 0.948 0.589947411006018 0.00488079711825012 -0.572510025230265 4.57652913840055 Q13451 FKBP5 Q13451.S445.p_FKBP5 Q13451_S445s _1_1_445_445 Q13451 Q13451 Peptidyl-prolyl cis-trans isomerase FKBP5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11170.11170.5 21.43 19.92 2.229 5 1 1 0 692.1347 3376.6782 S445s TMT10 433 (K) TSEGVTNEKGTDsQAMEEEKPEGHV (-) T(0.0)S(0.0)EGVT(0.0)NEKGT(0.0)DS(0.99)QAMEEEKPEGHV K:TMT10,s:Phosphorylated S FKBP5 51724.7 7 3 1478.1 138.78 HUMAN 1 -2.2919 23.1151 TNELPLPSPAAAGAP-p Q5T440;S82-p TNELPLPSPAAAGAP 0.212809275527928 0.990324797150279 0.193 0.00266666666666671 12.9661984523881 0.0627098350766734 0.193 0.00266666666666672 0.0505103240517352 0.985664276087453 2.50497784541351 0.0188115651791396 Q5T440 IBA57 Q5T440.S82.p_IBA57 Q5T440_S82s _1_1_82_82 Q5T440 Q5T440 Putative transferase CAF17, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.37287.37287.4 21.27 21.27 3.132 2 1 1 0 762.1526 2965.6146 S82s Hydrogen 63 (R) GPDAAPFLLGLLTNELPLPsPAAAGAPPAAR (A) GPDAAPFLLGLLT(0.0)NELPLPS(0.99)PAAAGAPPAAR s:Phosphorylated S IBA57 38496.6 2 1 4851.1 25.89 HUMAN 1 12.9662 0.0627 TNENRENSPAGRAQP-p Q6ZSS7;S733-p TNENRENSPAGRAQP 0.898261213438234 0.328573201893544 0.0276666666666666 0.106333333333333 0.91333518921562 6.40166537182148 0.0276666666666666 0.106333333333333 0.810338514762753 0.22899893512469 0.251995927325956 1.35547236404847 Q6ZSS7 MFSD6 Q6ZSS7.S733.p_MFSD6 Q6ZSS7_S733s _1_1_733_733 Q6ZSS7 Q6ZSS7 Major facilitator superfamily domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9459.9459.3 15.21 8.66 2.517 3 1 1 0 859.7452 2497.2593 S733s TMT10 717 (R) ASEIQPLQGTNENRENsPAGR (A) AS(0.0)EIQPLQGT(0.0)NENRENS(0.99)PAGR s:Phosphorylated S MFSD6 88828 1 3 2690.1 73.9 HUMAN 1 0.9133 6.4017 TNEPVQLTPDDDDIV-p P41743;T564-p TNEPVQLTPDDDDIV 0.545093397509618 0.976896760995859 0.088 0.00366666666666667 4.86378937728795 0.145290979319978 0.088 0.00366666666666666 0.326302996694964 0.96709892840191 1.07903666781327 0.0431861872656419 P41743 PRKCI P41743.T564.p_PRKCI P41743_T564t _1_1_564_564 P41743 P41743 Protein kinase C iota type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.34084.34688.4 31.21 31.21 1.788 4 1 1 0 1232.858 4848.4409 T564t TMT10 534 (K) QVVPPFKPNISGEFGLDNFDSQFTNEPVQLtPDDDDIVR (K) QVVPPFKPNIS(0.0)GEFGLDNFDS(0.0)QFT(0.0)NEPVQLT(0.99)PDDDDIVR K:TMT10,t:Phosphorylated T PRKCI 69231.1 26 6 1048.1 184.27 HUMAN 1 4.8638 0.1453 TNFFGFLS_______-p P23743;S735-p TNFFGFLS_______ 0.733466464014547 0.0372582401182819 0.0463333333333333 0.266333333333333 2.54868083391919 19.2037980417295 0.0469865783004962 0.266333333333333 0.556073138399781 0.0120121347620096 0.627152839081357 3.70682822996123 P23743 DGKA P23743.S735.p_DGKA P23743_S735s _1_1_735_735 P23743 P23743 Diacylglycerol kinase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35501.35501.2 13.43 13.43 13.43 3 1 1 0 664.8098 1248.6462 S735s TMT10 727 (R) STNFFGFLs (-) S(0.0)T(0.0)NFFGFLS(0.99) s:Phosphorylated S DGKA 83998.1 2 2 4734.1 27.29 HUMAN 1 2.5487 19.2038 TNFMMTPYVVTRYYR-p P45984-4;Y185-p TNFMMTPYVVTRYYR 0.121850773577826 0.054128173834924 0.361333333333333 0.321666666666667 19.0156192935377 16.8841412750364 0.361333333333333 0.321666666666667 0.0125440584983165 0.0204920719703818 3.67080381828165 3.2374042462542 P45984 MAPK9 P45984.4.Y185.p_MAPK9 P45984-4_Y185y _1_1_185_185 P45984-4 P45984|P45984-4|P45984-2|P45984-3|J3KNK1|P45984-5 Isoform Beta-2 of Mitogen-activated protein kinase 9 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.27525.27525.2 23.24 23.24 3.783 5 1 1 0 1050.9847 2020.9856 Y185y TMT10 175 (R) TACTNFMMTPyVVTR (Y) T(0.0)ACT(0.0)NFMMT(0.0)PY(0.99)VVT(0.0)R C:Carbamidomethylation,y:Phosphorylated Y MAPK9 48824 5 1 139.1 23.24 HUMAN 1 19.0156 16.8841 TNGCGLESPGNTVTP-p O94782;S398-p TNGCGLESPGNTVTP 0.181080338359562 0.149474681038081 -0.403333333333333 -0.249 14.63316088271 10.8621970202648 -0.403333333333333 -0.249 0.0344099397130991 0.0819936647701923 -2.80992914980332 -2.13103760367064 O94782 USP1 O94782.S398.p_USP1 O94782_S398s _1_1_398_398 O94782 O94782 Ubiquitin carboxyl-terminal hydrolase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26518.26518.5 20.76 19.25 3.594 6 1 1 0 1160.7859 5719.9241 S398s TMT10 385 (K) CESDNTTNGCGLEsPGNTVTPVNVNEVKPINKGEEQIGFELVEK (L) CES(0.0)DNT(0.0)T(0.0)NGCGLES(0.99)PGNT(0.0)VT(0.0)PVNVNEVKPINKGEEQIGFELVEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S USP1 89232.6 1 5 1052.1 182.92 HUMAN 1 -14.6332 -10.8622 TNGPSNGSSSRQRTS-p Q15007;S281-p TNGPSNGSSSRQRTS 0.143638422086766 0.030879695719171 0.301666666666667 -0.292666666666667 17.2187549350215 20.4127427956357 0.301666666666667 -0.292666666666667 0.0189724975972541 0.00909338796478698 3.30584540344186 -3.96428700947444 Q15007 WTAP Q15007.S281.p_WTAP Q15007_S281s _1_1_281_281 Q15007 Q15007 Pre-mRNA-splicing regulator WTAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5866.5866.2 9.27 9.27 1.139 5 1 1 0 743.3482 1405.7233 S281s TMT10 273 (R) LTNGPSNGsSSR (Q) LT(0.0)NGPS(0.0)NGS(0.99)S(0.0)S(0.0)R s:Phosphorylated S WTAP 44414 2 2 3128.1 60.03 HUMAN 1 17.2188 -20.4127 TNIPENDTVDGREEK-p Q92734;T140-p TNIPENDTVDGREEK 0.561252574128087 0.129179148908115 -0.085 0.192 4.6183961558444 11.7131501302879 -0.085 0.192 0.34527122403086 0.0674038940034933 -1.03363876318409 2.28045035749407 Q92734 TFG Q92734.T140.p_TFG Q92734_T140t_1_1_140_140 Q92734 Q92734 Protein TFG HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23545.23545.4 11.45 11.45 1.301 4 1 1 0 911.951 3563.8117 N134n T140t TMT10 119 (R) LLDSLEPPGEPGPSTnIPENDtVDGREEK (S) LLDS(0.0)LEPPGEPGPS(0.0)T(0.0)N(0.99)IPEN(0.0)DT(0.99)VDGREEK K:TMT10,n:Deamidated,t:Phosphorylated T TFG 43504.2 1 1 2044.1 101.04 HUMAN 1 -4.6184 11.7132 TNKSGSGTMNLGGSL-p P47756;T186-p TNKSGSGTMNLGGSL 0.213116133407602 0.531496303589951 0.374666666666667 0.0736666666666667 12.955374789751 3.68981128115297 0.374666666666667 0.0736666666666667 0.0506363649199986 0.427581465924397 2.50302880016282 0.857214955094508 P47756 CAPZB P47756.T186.p_CAPZB P47756_T186t _1_1_186_186 P47756 B1AK88|P47756|P47756-2|B1AK87|B1AK85 F-actin-capping protein subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13820.13820.2 13.58 13.58 2.065 5 1 1 0 823.8912 1566.8107 T186t TMT10 182 (K) SGSGtMNLGGSLTR (Q) S(0.0)GS(0.0)GT(0.99)MNLGGS(0.0)LT(0.0)R t:Phosphorylated T CAPZB 31635.2 2 2 4212.1 35.35 HUMAN 1 12.9554 3.6898 TNLIELDTNDDDIVF-p P49407;T381-p TNLIELDTNDDDIVF 0.373125692310249 0.231991719986905 -0.157 0.157666666666667 7.94120311957903 8.35797599570776 -0.157 0.157666666666667 0.160649614611108 0.145949429066629 -1.62495923167998 1.69664667890237 P49407 ARRB1 P49407.T381.p_ARRB1 P49407_T381t _1_1_381_381 P49407 P49407|P49407-2 Beta-arrestin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.35421.35421.3 24.05 24.05 5.543 3 1 1 0 1258.5787 3693.7493 T381t TMT10 364 (R) EVPENETPVDTNLIELDtNDDDIVFEDFAR (Q) EVPENET(0.0)PVDT(0.0)NLIELDT(0.99)NDDDIVFEDFAR t:Phosphorylated T ARRB1 47464.2 2 2 1962.1 105.05 HUMAN 1 -7.9412 8.358 TNLNRLISQIVSSIT-p P68363;S232-p TNLNRLISQIVSSIT 0.603716896580728 0.0621080172192089 0.116666666666667 0.356666666666667 4.04638085905655 16.0640389527833 0.116666666666667 0.356666666666667 0.393878172376828 0.0247511911811204 0.925985021204048 3.07831018340665 P68363 TUBA1B P68363.S232.p_TUBA1B P68363_S232s _1_1_232_232 P68363 F5H5D3|P68363|Q9BQE3|Q9NY65|P68366|P68366-2|Q9NY65-2|P68363-2|Q9H853 Tubulin alpha-1B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37871.37871.3 16.92 16.92 6.259 5 1 1 0 599.6743 1717.0421 S232s TMT10 230 (R) LIsQIVSSITASLR (F) LIS(0.99)QIVS(0.0)S(0.0)IT(0.0)AS(0.0)LR s:Phosphorylated S TUBA1B 50835.4 2 8 868.1 210.03 HUMAN 1 4.0464 16.064 TNLSGRQSPSFKLSL-p Q6IN85;S741-p TNLSGRQSPSFKLSL 0.15939479918381 0.00488322175391975 0.227 0.659666666666667 15.9670740238639 33.7584915187134 0.227 0.659666666666667 0.0253100263684012 0.00042087278922834 3.06187070219675 7.64816306997355 Q6IN85 PPP4R3A Q6IN85.S741.p_PPP4R3A Q6IN85_S741s _1_1_741_741 Q6IN85 Q6IN85|Q6IN85-2|Q6IN85-4 Serine/threonine-protein phosphatase 4 regulatory subunit 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10290.10290.4 12.82 12.82 2.164 4 1 1 0 465.7499 1780.0118 S741s TMT10 734 (K) TNLSGRQsPSFK (L) T(0.0)NLS(0.0)GRQS(0.99)PS(0.0)FK K:TMT10,s:Phosphorylated S PPP4R3A 95994.2 7 5 842.1 214.14 HUMAN 1 15.9671 33.7585 TNNEDSLSPTSSTLS-p Q9ULH7-5;S554-p TNNEDSLSPTSSTLS 0.198733336721893 0.0386192518351755 -0.198666666666667 -0.251 13.6621580553463 18.9817789933728 -0.198666666666667 -0.251 0.0430312730396399 0.0126421838168667 -2.63109681300369 -3.66055134622347 Q9ULH7 MKL2 Q9ULH7.5.S554.p_MKL2 Q9ULH7-5_S554s _1_1_554_554 Q9ULH7-5 Q9ULH7-5|Q9ULH7-4 Isoform 5 of MKL/myocardin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24561.24561.4 21.37 21.37 2.571 8 1 1 0 869.9156 3396.6841 S554s TMT10 546 (R) MTNNEDSLsPTSSTLSNLELDAAEKDR (K) MT(0.0)NNEDS(0.0)LS(0.99)PT(0.0)S(0.0)S(0.0)T(0.0)LS(0.0)NLELDAAEKDR K:TMT10,s:Phosphorylated S MKL2 119334.1 13 10 464.1 303.55 HUMAN 1 -13.6622 -18.9818 TNNQNWGSQPIAQQP-p O60506;S587-p TNNQNWGSQPIAQQP 0.526107083922874 0.661114183066543 -0.126333333333333 0.0656666666666667 5.16014136377565 2.46044209700743 -0.126333333333333 0.0656666666666667 0.304779578161378 0.567486834239066 -1.13332549447619 0.608440263311658 O60506 SYNCRIP O60506.S587.p_SYNCRIP O60506_S587s _1_1_587_587 O60506 O60506|O60506-2 Heterogeneous nuclear ribonucleoprotein Q HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15692.15692.4 22.04 22.04 4.075 5 1 1 0 932.1917 3645.7835 S587s TMT10 579 (R) QTNNQNWGsQPIAQQPLQGGDHSGNYGYK (S) QT(0.0)NNQNWGS(0.99)QPIAQQPLQGGDHS(0.0)GNY(0.0)GY(0.0)K K:TMT10,s:Phosphorylated S SYNCRIP 69829.6 2 14 1376.1 148.68 HUMAN 1 -5.1601 2.4604 TNPRLLGTPDIGSIS-p Q03164-3;T3375-p TNPRLLGTPDIGSIS 0.221270363290342 0.0694882415719225 0.355666666666667 -0.317 12.6171480747327 15.3999137111788 0.355666666666667 -0.317 0.0547375295339997 0.0288408880575453 2.4423024616372 -2.95180777182371 Q03164 KMT2A Q03164.3.T3375.p_KMT2A Q03164-3_T3375t _1_1_3375_3375 Q03164-3 Q03164-3 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.36926.36926.3 18.93 16.36 4.709 3 1 1 0 731.4296 2112.3044 T3375t TMT10 3372 (R) LLGtPDIGSISNLLIK (A) LLGT(0.99)PDIGS(0.0)IS(0.0)NLLIK K:TMT10,t:Phosphorylated T KMT2A 436608.3 1 41 26.1 936.8 HUMAN 1 12.6171 -15.3999 TNPVTSNSDEECNET-p P46100;S677-p TNPVTSNSDEECNET 0.444478993442275 0.0205344648135939 0.102 0.361333333333333 6.48898894091581 23.0929618145585 0.102 0.361333333333333 0.22444043714306 0.00490573199458894 1.37123221012399 4.57129138236354 P46100 ATRX P46100.S677.p_ATRX P46100_S677s _1_1_677_677 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9921.9921.5 24.38 24.38 2.391 8 1 1 0 800.8039 3920.0274 S677s TMT10 661 (K) TTPLRRPTETNPVTSNsDEECNETVKEK (Q) T(0.0)T(0.0)PLRRPT(0.0)ET(0.0)NPVT(0.0)S(0.0)NS(0.99)DEECNET(0.0)VKEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATRX 285034.2 11 15 18.1 1035.36 HUMAN 1 6.489 23.093 TNREDEDTPPNSPNV-p P98174;T711-p TNREDEDTPPNSPNV 0.211405693252962 0.0171821089613678 -0.241666666666667 -0.387 13.0262667481766 24.3478061091794 -0.241666666666667 -0.387 0.0498165130197871 0.00367467884441587 -2.51580112916278 -4.87459183868318 P98174 FGD1 P98174.T711.p_FGD1 P98174_T711t _1_1_711_711 P98174 P98174 FYVE, RhoGEF and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17831.17831.3 16.34 9.87 3.554 4 1 1 0 1021.8398 2983.5373 T711t TMT10 700 (K) LLNSTNREDEDtPPNSPNVDLGK (R) LLNS(0.0)T(0.0)NREDEDT(0.99)PPNS(0.0)PNVDLGK K:TMT10,t:Phosphorylated T FGD1 107757.1 3 8 1189.1 168.38 HUMAN 1 -13.0263 -24.3478 TNRNGKRTPTHTSRV-p Q9BQI3;T484-p TNRNGKRTPTHTSRV 0.0224122716392434 0.00215840414867258 0.814333333333333 0.794666666666667 38.1811643339491 41.4266337710361 0.814333333333334 0.794666666666667 0.000152013992892671 7.20006841139198e-05 9.36297191306391 10.7920302337816 Q9BQI3 EIF2AK1 Q9BQI3.T484.p_EIF2AK1 Q9BQI3_T484t _1_1_484_484 Q9BQI3 Q9BQI3|Q9BQI3-2 Eukaryotic translation initiation factor 2-alpha kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.2661.2661.4 10.65 10.65 3.22 4 1 1 0 448.9948 1712.992 T484t TMT10 480 (R) NGKRtPTHTSR (V) NGKRT(0.99)PT(0.0)HT(0.0)S(0.0)R K:TMT10,t:Phosphorylated T EIF2AK1 71675.7 1 4 2626.1 76.5 HUMAN 1 38.1812 41.4266 TNRNSPATPPNTLNL-p Q92870-4;T34-p TNRNSPATPPNTLNL 0.145835187369471 0.359465259632952 0.337333333333333 0.14 17.0369439423424 5.8949982954399 0.337333333333333 0.14 0.0197836129017681 0.257335777444174 3.26991477441293 1.265539608991 Q92870 APBB2 Q92870.4.T34.p_APBB2 Q92870-4_T34t _1_1_34_34 Q92870-4 Q92870-4|G5E9Y1|Q92870-2 Isoform 4 of Amyloid-beta A4 precursor protein-binding family B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13970.13970.3 14.97 14.97 4.328 3 1 1 0 568.6277 1623.9016 T34t TMT10 30 (R) NSPAtPPNTLNLR (S) NS(0.0)PAT(0.99)PPNT(0.0)LNLR t:Phosphorylated T APBB2 84356.2 4 4 667.1 249.66 HUMAN 1 17.0369 5.895 TNRRESISPQPADSA-p Q9GZR1;S352-p TNRRESISPQPADSA 0.314598608724081 0.00949153116870816 0.153666666666667 0.420333333333333 9.39834343478729 28.5517240923647 0.153666666666667 0.419536374473395 0.114859165472542 0.00139581413107455 1.87734325309898 5.99439876374732 Q9GZR1 SENP6 Q9GZR1.S352.p_SENP6 Q9GZR1_S352s _1_1_352_352 Q9GZR1 Q9GZR1|Q9GZR1-2|F8W6D9 Sentrin-specific protease 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15848.15848.4 22.43 22.43 1.138 8 1 1 0 1057.2524 4146.0232 S352s TMT10 349 (R) ESIsPQPADSACSSPAPSTGKVEAALNENTCRAER (E) ES(0.0)IS(0.99)PQPADS(0.0)ACS(0.0)S(0.0)PAPS(0.0)T(0.0)GKVEAALNENT(0.0)CRAER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SENP6 127627.2 5 1 1568.1 131.02 HUMAN 1 9.3983 28.5517 TNRSSVKTPEPVVPT-p Q14676;T1157-p TNRSSVKTPEPVVPT 0.324195658268258 0.00298268443677266 0.141666666666667 0.733666666666667 9.16134342710802 37.961742348475 0.141666666666667 0.733666666666667 0.121301356423769 0.000159891642973966 1.83629589135607 9.25131618970978 Q14676 MDC1 Q14676.T1157.p_MDC1 Q14676_T1157t _1_1_1157_1157 Q14676 Q14676|Q14676-2 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19779.19779.3 25.86 25.86 1.157 13 1 1 0 1439.4047 4236.2287 T1157t TMT10 1153 (R) SSVKtPEPVVPTAPELQPSTSTDQPVTSEPTSQVTR (G) S(0.0)S(0.0)VKT(0.99)PEPVVPT(0.0)APELQPS(0.0)T(0.0)S(0.0)T(0.0)DQPVT(0.0)S(0.0)EPT(0.0)S(0.0)QVT(0.0)R K:TMT10,t:Phosphorylated T MDC1 227803.2 8 30 6.1 1662.62 HUMAN 1 9.1613 37.9617 TNSLNHDSPPSTPPR-p Q8N9M1;S151-p TNSLNHDSPPSTPPR 0.337746170974319 0.448335277533207 0.14 0.0716666666666667 8.77964203752193 4.64456602331866 0.14 0.0716666666666667 0.132445069709636 0.343196932662441 1.77021864773787 1.03830343418971 Q8N9M1 C19orf47 Q8N9M1.S151.p_C19orf47 Q8N9M1_S151s _1_1_151_151 Q8N9M1 Q8N9M1|Q8N9M1-2|Q8N9M1-3 Uncharacterized protein C19orf47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12690.12690.3 11.55 11.55 11.554 5 1 1 0 725.0139 2093.0647 S151s TMT10 142 (R) MITNSLNHDsPPSTPPR (R) MIT(0.0)NS(0.0)LNHDS(0.99)PPS(0.0)T(0.0)PPR s:Phosphorylated S C19orf47 44916.7 2 2 1515.1 134.55 HUMAN 1 8.7796 4.6446 TNSRLSFSPENILIQ-p Q9Y2F5;S960-p TNSRLSFSPENILIQ 0.708749001845096 0.335868693759825 -0.0553333333333333 -0.108666666666667 2.81001239509836 6.27888951387219 -0.0553333333333334 -0.108666666666667 0.523598942191987 0.235565154435654 -0.681552241567963 -1.3337659136182 Q9Y2F5 ICE1 Q9Y2F5.S960.p_ICE1 Q9Y2F5_S960s _1_1_960_960 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.33475.33475.3 24.29 24.29 2.249 2 1 1 0 765.7377 2215.2284 S960s TMT10 957 (R) LSFsPENILIQNQDIVR (E) LS(0.0)FS(0.99)PENILIQNQDIVR s:Phosphorylated S ICE1 250910.2 4 11 216.1 433.09 HUMAN 1 -2.81 -6.2789 TNSSIVVSPKMTRNQ-p Q9NRD1;S258-p TNSSIVVSPKMTRNQ 0.724065572403675 0.0787838886592226 -0.0523333333333333 0.201 2.65377750563989 14.6503570839135 -0.0523333333333333 0.201 0.542778016263824 0.0342739604785904 -0.649168463012025 2.81134665027736 Q9NRD1 FBXO6 Q9NRD1.S258.p_FBXO6 Q9NRD1_S258s _1_1_258_258 Q9NRD1 Q9NRD1 F-box only protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15744.15744.2 14.3 11.87 3.906 4 1 1 0 834.9706 1588.9674 S258s TMT10 250 (R) VTNSSIVVsPK (M) VT(0.0)NS(0.0)S(0.0)IVVS(0.99)PK K:TMT10,s:Phosphorylated S FBXO6 34331.3 2 1 4591.1 29.12 HUMAN 1 -2.6538 14.6504 TNTERPDTPTNTPNA-p O75530-2;T55-p TNTERPDTPTNTPNA 0.187534582157854 0.203203796078611 0.245 0.149333333333333 14.2667331085858 9.10299216090758 0.245 0.149333333333333 0.0374392111182074 0.122942144383489 2.74202395558078 1.82552799732602 O75530 EED O75530.2.T55.p_EED O75530-2_S34sT55t_2_2_34_55 O75530-2 O75530-2|O75530-3|E9PJK2 Isoform 2 of Polycomb protein EED HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13556.13556.5 23.82 19.27 2 11 2 2 0 1144.3335 5557.7006 S34s T55t TMT10 21 (K) QKLSSDENSNPDLsGDENDDAVSIESGTNTERPDtPTNTPNAPGRK (S) QKLS(0.0)S(0.0)DENS(0.0)NPDLS(0.99)GDENDDAVS(0.0)IES(0.0)GT(0.0)NT(0.0)ERPDT(0.99)PT(0.0)NT(0.0)PNAPGRK K:TMT10,s:Phosphorylated S,t:Phosphorylated T EED 53858.8 8 2 1998.1 103.39 HUMAN 2 14.2667 9.103 TNTSKTVSFEALPIM-p O15084-1;S1044-p TNTSKTVSFEALPIM 0.111684031420699 0.0167000243121098 -0.343666666666667 -0.348666666666667 19.8869495377542 24.5369645319393 -0.343666666666667 -0.348666666666667 0.0102637259198904 0.00351806246901244 -3.85473042049257 -4.92145716770412 O15084 ANKRD28 O15084.1.S1044.p_ANKRD28 O15084-1_S1044s _1_1_1044_1044 O15084-1 O15084-1|O15084-4|O15084-2 Isoform 3 of Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29251.29251.2 15.76 15.76 2.88 2 1 1 0 786.907 1492.8395 S1044s TMT10 1042 (K) TVsFEALPIMR (N) T(0.0)VS(0.99)FEALPIMR s:Phosphorylated S ANKRD28 118309.4 4 3 3022.1 63.06 HUMAN 1 -19.8869 -24.537 TNTTDSVSDEEKVSG-p Q9NR09;S2955-p TNTTDSVSDEEKVSG 0.158414346785039 0.695182842002394 -0.313 0.045 16.0278161816921 2.16955389115213 -0.313 0.045 0.0249584943124403 0.606798656962762 -3.07353310353334 0.545966538532661 Q9NR09 BIRC6 Q9NR09.S2955.p_BIRC6 Q9NR09_S2955s _1_1_2955_2955 Q9NR09 Q9NR09 Baculoviral IAP repeat-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12990.12990.3 12.36 12.36 1.434 7 1 1 0 750.6993 2170.1127 S2955s TMT10 2944 (R) VSVTTNTTDSVsDEEK (V) VS(0.0)VT(0.0)T(0.0)NT(0.0)T(0.0)DS(0.0)VS(0.99)DEEK K:TMT10,s:Phosphorylated S BIRC6 536521.4 2 8 1201.1 166.97 HUMAN 1 -16.0278 2.1696 TNVSDEVSSEEGPET-p Q8N3S3;S335-p TNVSDEVSSEEGPET 0.960719111754911 0.0957805260467767 0.00766666666666667 0.197333333333333 0.334011719556805 13.4695691605221 0.00766666666666666 0.197333333333333 0.925974075791201 0.044982447727241 0.0973216896645831 2.59454962763581 Q8N3S3 PHTF2 Q8N3S3.S335.p_PHTF2 Q8N3S3_S331sS335sS336s_3_3_331_336 Q8N3S3 Q8N3S3|Q8N3S3-2|Q8N3S3-3|Q8N3S3-4|Q8N3S3-7|Q8N3S3-5|Q8N3S3-6 Putative homeodomain transcription factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22527.22527.3 12.64 12.64 3.951 8 3 3 0 947.0597 2599.2573 S331s S335s S336s TMT10 326 (R) TITNVsDEVssEEGPETGYSLR (R) T(0.0)IT(0.0)NVS(0.99)DEVS(0.99)S(0.99)EEGPET(0.0)GY(0.0)S(0.0)LR s:Phosphorylated S PHTF2 89782.6 3 3 3885.1 41.39 HUMAN 1 0.334 13.4696 TNYRSLGSVQAPSYG-p P05783;S18-p TNYRSLGSVQAPSYG 0.684147762785754 0.72600282490504 0.0946666666666667 -0.0706666666666666 3.09153127824911 1.91382923185024 0.0946666666666667 -0.0706666666666666 0.490734817530827 0.643601543280282 0.738942799026651 -0.48957724322285 P05783 KRT18 P05783.S18.p_KRT18 P05783_S18s _1_1_18_18 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17066.17066.3 18.95 14.27 3.192 10 1 1 0 1055.1845 3083.5708 S18s TMT10 15 (R) SLGsVQAPSYGARPVSSAASVYAGAGGSGSR (I) S(0.0)LGS(0.99)VQAPS(0.0)Y(0.0)GARPVS(0.0)S(0.0)AAS(0.0)VY(0.0)AGAGGS(0.0)GS(0.0)R s:Phosphorylated S KRT18 48057 5 6 89.1 623.62 HUMAN 1 3.0915 -1.9138 TPAATPPSPKGGLAT-p E9PAV3;S1135-p TPAATPPSPKGGLAT 0.343120598282226 0.350815780791188 -0.154666666666667 -0.148 8.6299180084247 6.03092435471209 -0.154666666666667 -0.148 0.137090764763958 0.249406383255893 -1.74430023552218 -1.28976234202634 E9PAV3 NACA E9PAV3.S1135.p_NACA E9PAV3_S1135s _1_1_1135_1135 E9PAV3 E9PAV3 Nascent polypeptide-associated complex subunit alpha, muscle-specific form HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11066.11066.2 14.23 14.23 1.936 4 1 1 0 915.99 1751.0104 S1135s TMT10 1124 (K) GAPTTPAATPPsPK (G) GAPT(0.0)T(0.0)PAAT(0.0)PPS(0.99)PK K:TMT10,s:Phosphorylated S NACA 206102.3 1 6 533.1 279.72 HUMAN 1 -8.6299 -6.0309 TPADRGPSPAPAPAA-p Q8IX07;S901-p TPADRGPSPAPAPAA 0.678489956887424 0.368292556023083 0.064 0.136333333333333 3.15296627057715 5.75216573107061 0.064 0.136333333333333 0.48384178638733 0.265939854550576 0.751313857324164 1.24000168938484 Q8IX07 ZFPM1 Q8IX07.S901.p_ZFPM1 Q8IX07_S901s _1_1_901_901 Q8IX07 Q8IX07 Zinc finger protein ZFPM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6993.6993.3 16.56 16.56 4.684 4 1 1 0 798.7311 2314.2101 S901s TMT10 894 (R) TPADRGPsPAPAPAASPQPGSR (G) T(0.0)PADRGPS(0.99)PAPAPAAS(0.0)PQPGS(0.0)R s:Phosphorylated S ZFPM1 106540.7 3 8 961.1 194.31 HUMAN 1 3.153 5.7522 TPAKILPTPPATLKS-p A0A087WZV0;T1227-p TPAKILPTPPATLKS 0.833843592901542 0.0261257025056652 -0.036 -0.314666666666667 1.52252071083088 21.5215974025625 -0.036 -0.314666666666667 0.704284173132303 0.00704433919573036 -0.400257361489632 -4.20905314248359 A0A087WZV0 PPIP5K2 A0A087WZV0.T1227.p_PPIP5K2 A0A087WZV0_T1227t _1_1_1227_1227 A0A087WZV0 A0A087WZV0|O43314|O43314-2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25547.25547.3 12.16 12.16 5.856 2 1 1 0 530.3215 1508.9816 T1227t TMT10 1224 (K) ILPtPPATLK (S) ILPT(0.99)PPAT(0.0)LK K:TMT10,t:Phosphorylated T PPIP5K2 145671.7 1 12 778.1 226.58 HUMAN 1 -1.5225 -21.5216 TPAKKTVTPAKAVTT-p P19338;T99-p TPAKKTVTPAKAVTT 0.0645255285995207 0.0302841373435523 0.497 -0.407333333333333 25.7410909581481 20.5426200365674 0.497 -0.407333333333333 0.00266618882736868 0.00882547311597797 5.23395442514567 -3.9925163214012 P19338 NCL P19338.T99.p_NCL P19338_T99t _1_1_99_99 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7557.7557.3 8.65 4.8 3.18 2 1 1 0 504.644 1431.9502 T99t TMT10 96 (K) KTVtPAK (A) KT(0.0)VT(0.99)PAK K:TMT10,t:Phosphorylated T NCL 76670.1 3 4 114.1 570.88 HUMAN 1 25.7411 -20.5426 TPAPDPGSPRTPPPT-p Q96LL9;S137-p TPAPDPGSPRTPPPT 0.459755443018534 0.0545478476546813 0.103666666666667 0.268 6.22187669710754 16.8399742783699 0.103666666666667 0.268 0.238677967172904 0.020701536094966 1.32399440173331 3.22875108134685 Q96LL9 DNAJC30 Q96LL9.S137.p_DNAJC30 Q96LL9_S137s _1_1_137_137 Q96LL9 Q96LL9 DnaJ homolog subfamily C member 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6294.6294.2 10.52 10.52 4.304 2 1 1 0 652.3163 1223.6582 S137s TMT10 130 (R) TPAPDPGsPR (T) T(0.0)PAPDPGS(0.99)PR s:Phosphorylated S DNAJC30 26075 2 4 2713.1 73.01 HUMAN 1 6.2219 16.84 TPAPVEKSPAKKKAT-p P16401;S18-p TPAPVEKSPAKKKAT 0.63378091608585 0.000952253650599092 -0.064 -1.37733333333333 3.68730839591857 55.4998858387746 -0.064 -1.37733333333333 0.427827956686217 2.81845701792488e-06 -0.856865600279166 -19.8909053463406 P16401 HIST1H1B P16401.S18.p_HIST1H1B P16401_S18s _1_1_18_18 P16401 P16401 Histone H1.5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12203.12203.2 18.28 18.28 1.1 5 1 1 0 1460.2866 2839.602 S18s Acetyl 2 (M) SETAPAETATPAPVEKsPAKK (K) S(0.0)ET(0.0)APAET(0.0)AT(0.0)PAPVEKS(0.99)PAKK K:TMT10,s:Phosphorylated S HIST1H1B 22579.8 11 8 738.2 234.77 HUMAN 1 -3.6873 -55.4999 TPAQYDASELKASMK-p P07355;S112-p TPAQYDASELKASMK 0.246312355897196 0.0109952044988489 0.173333333333333 0.396 11.6446224544066 27.4438342530649 0.173333333333333 0.396 0.0684759008717195 0.00180142661415941 2.26945446632114 5.68254944076354 P07355 ANXA2 P07355.S112.p_ANXA2 P07355_S112s _1_1_112_112 P07355 P07355-2|A6NMY6|H0YMU9 Annexin A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15425.15425.3 14.25 14.02 5.332 3 1 1 0 587.6337 1680.9209 S112s TMT10 105 (K) TPAQYDAsELK (A) T(0.0)PAQY(0.0)DAS(0.99)ELK K:TMT10,s:Phosphorylated S ANXA2 38831.6 2 8 537.1 277.57 HUMAN 1 11.6446 27.4438 TPARPFGSVGRRSRL-p J3KQR7;S493-p TPARPFGSVGRRSRL 0.546344237168964 0.221763078290363 -0.0873333333333333 -0.142 4.84569162186787 8.61368812553171 -0.0873333333333333 -0.142 0.327665591308101 0.137604040838542 -1.07570293548679 -1.74089341635996 J3KQR7 NotFound J3KQR7.S493.p_NotFound J3KQR7_S493s _1_1_493_493 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9529.9529.3 8.69 8.69 1.985 2 1 1 0 485.2548 1373.7851 S493s TMT10 486 (R) TPARPFGsVGR (R) T(0.0)PARPFGS(0.99)VGR s:Phosphorylated S CEP170B 172326.6 4 7 51.1 746.11 HUMAN 1 -4.8457 -8.6137 TPARVSCSPHSAKGT-p F8VUX9;S1091-p TPARVSCSPHSAKGT 0.390987808375823 0.0310889125388133 0.136333333333333 -0.306 7.53413992290027 20.368177599265 0.136333333333333 -0.306 0.176435514289734 0.00918718031079716 1.55422497416978 -3.9546267855502 F8VUX9 NotFound F8VUX9.S1091.p_NotFound F8VUX9_S1091s _1_1_1091_1091 F8VUX9 F8VUX9|Q96KV7 WD repeat-containing protein 90 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.4916.4916.3 7.62 7.62 1.138 3 1 1 0 504.2538 1430.7826 S1091s TMT10 1088 (R) VSCsPHSAK (G) VS(0.0)CS(0.99)PHS(0.0)AK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WDR90 191043 1 3 4129.1 37.01 HUMAN 1 7.5341 -20.3682 TPASGLQTPTSTPAP-p Q96DF8;T437-p TPASGLQTPTSTPAP 0.821576108911882 0.772639054089846 0.0486666666666667 -0.0366666666666666 1.64222725616471 1.55000369554515 0.0486666666666667 -0.0366666666666666 0.685136767589174 0.699841400485476 0.428027496755268 -0.406624860061577 Q96DF8 DGCR14 Q96DF8.T437.p_DGCR14 Q96DF8_T437t _1_1_437_437 Q96DF8 Q96DF8 Protein DGCR14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10876.10876.3 19.94 19.94 2.478 8 1 1 0 736.3693 2127.1243 T437t TMT10 430 (K) TPASGLQtPTSTPAPGSATR (T) T(0.0)PAS(0.0)GLQT(0.99)PT(0.0)S(0.0)T(0.0)PAPGS(0.0)AT(0.0)R t:Phosphorylated T DGCR14 52624.2 2 8 924.1 199.86 HUMAN 1 1.6422 -1.55 TPASPPRSPAEPNDI-p O95359;S2321-p TPASPPRSPAEPNDI 0.0990820185181755 0.00421471655656868 -0.346666666666667 -0.617 21.2281887839058 34.9399113276466 -0.346666666666667 -0.617 0.00753669814627267 0.000320633478938264 -4.1476319618408 -8.0721187717079 O95359 TACC2 O95359.S2321.p_TACC2 O95359_S2317sS2321s_2_2_2317_2321 O95359 O95359|E9PBC6|O95359-3|E7EMZ9|O95359-5|Q4VXL8|O95359-1|D6RAA5|O95359-6|Q4VXL4|O95359-2 Transforming acidic coiled-coil-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16969.16969.5 18.45 14.09 2.258 4 2 2 0 792.8272 3800.1728 S2317s S2321s TMT10 2306 (K) KTPEKLDNTPAsPPRsPAEPNDIPIAK (G) KT(0.0)PEKLDNT(0.0)PAS(0.99)PPRS(0.99)PAEPNDIPIAK K:TMT10,s:Phosphorylated S TACC2 311818.1 16 25 101.1 597.93 HUMAN 1 -21.2282 -34.9399 TPASTPVSGTPQASP-p Q9UHR4;S255-p TPASTPVSGTPQASP 0.272312733945943 0.865800323538702 0.175 -0.0186666666666666 10.701844283905 0.881922286604443 0.175 -0.0186666666666667 0.0850776668902791 0.816221013322328 2.10395323210532 -0.243968189192844 Q9UHR4 BAIAP2L1 Q9UHR4.S255.p_BAIAP2L1 Q9UHR4_S255sT257tS261s_3_3_255_261 Q9UHR4 Q9UHR4 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.34937.34937.4 9.82 9.82 1.219 6 3 3 0 936.4353 3486.8411 S255s T257t S261s M263m TMT10 239 (K) IMNMIEEIKTPASTPVsGtPQAsPmIER (S) IM(0.0)NM(0.0)IEEIKT(0.0)PAS(0.0)T(0.0)PVS(0.99)GT(0.99)PQAS(0.99)PM(0.99)IER K:TMT10,s:Phosphorylated S,t:Phosphorylated T,m:Oxidized methionine BAIAP2L1 57224 12 16 661.1 251.53 HUMAN 1 10.7018 -0.8819 TPATGEQSPGARSRH-p O00308;S211-p TPATGEQSPGARSRH 0.957810192524261 0.0568726193226686 -0.00833333333333333 -0.329 0.363885152679382 16.5926251423309 -0.00833333333333332 -0.329 0.919626515467442 0.0219147987001318 -0.105702220224964 -3.18047266022525 O00308 WWP2 O00308.S211.p_WWP2 O00308_S211s _1_1_211_211 O00308 O00308|O00308-2|O00308-4 NEDD4-like E3 ubiquitin-protein ligase WWP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4895.4895.3 14.52 14.52 3.136 4 1 1 0 527.9202 1501.7808 S211s TMT10 203 (R) TTPATGEQsPGAR (S) T(0.0)T(0.0)PAT(0.0)GEQS(0.99)PGAR s:Phosphorylated S WWP2 99480.8 3 1 5334.1 20.38 HUMAN 1 -0.3639 -16.5926 TPAVPPVSEDEDDDD-p Q13153-2;S174-p TPAVPPVSEDEDDDD 0.371567802822301 0.0687498559535842 0.134333333333333 0.211333333333333 7.97311215284103 15.4638346938536 0.134333333333333 0.211333333333333 0.159473595041642 0.0284195063958946 1.63049592476225 2.96389703932745 Q13153 PAK1 Q13153.2.S174.p_PAK1 Q13153-2_S174s _1_1_174_174 Q13153-2 Q13153-2|B3KNX7|E9PM17 Isoform 2 of Serine/threonine-protein kinase PAK 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18198.18461.4 28.66 24.73 5.986 5 1 1 0 1087.5208 4267.093 S174s TMT10 163 (K) AVSETPAVPPVsEDEDDDDDDATPPPVIAPRPEHTK (S) AVS(0.0)ET(0.0)PAVPPVS(0.99)EDEDDDDDDAT(0.0)PPPVIAPRPEHT(0.0)K K:TMT10,s:Phosphorylated S PAK1 62087.3 3 5 272.2 393.22 HUMAN 1 7.9731 15.4638 TPCRRTLSVNHLTSE-p O95069;S385-p TPCRRTLSVNHLTSE 0.715960741537752 0.0474461792514769 -0.052 -0.286666666666667 2.73751851327544 17.7084474317625 -0.052 -0.286666666666667 0.532412383988897 0.0169494362101909 -0.666575783035598 -3.40077173157446 O95069 KCNK2 O95069.S385.p_KCNK2 O95069_S385s _1_1_385_385 O95069 O95069 Potassium channel subfamily K member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12301.12301.3 10.12 10.12 2.218 4 1 1 0 522.6014 1485.8223 S385s TMT10 383 (R) TLsVNHLTSER (D) T(0.0)LS(0.99)VNHLT(0.0)S(0.0)ER s:Phosphorylated S KCNK2 47377.1 6 4 1506.1 135.64 HUMAN 1 -2.7375 -17.7084 TPDGLAVTPTPVPVV-p P26368;T133-p TPDGLAVTPTPVPVV 0.623858792074471 0.103638878616272 0.0983333333333333 0.206666666666667 3.80715911138411 13.003542015888 0.0983333333333333 0.206666666666667 0.416182762755406 0.050077864233691 0.880083649824886 2.51032742681155 P26368 U2AF2 P26368.T133.p_U2AF2 P26368_T133t_1_1_133_133 P26368 P26368|P26368-2 Splicing factor U2AF 65 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.35090.35090.4 21.7 17.6 1.143 7 1 1 0 1029.2814 4018.1377 T133t M144m TMT10 109 (K) AMQAAGQIPATALLPTMTPDGLAVtPTPVPVVGSQmTR (Q) AM(0.0)QAAGQIPAT(0.0)ALLPT(0.0)M(0.0)T(0.0)PDGLAVT(0.99)PT(0.0)PVPVVGS(0.0)QM(0.99)T(0.0)R t:Phosphorylated T,m:Oxidized methionine U2AF2 53842.4 5 4 958.1 194.87 HUMAN 1 3.8072 13.0035 TPDHAPLSPQSSVAS-p Q5PRF9;S271-p TPDHAPLSPQSSVAS 0.472379749153772 0.0160072688207601 -0.0963333333333333 -0.423 6.00647969735143 24.8038784573307 -0.0963333333333333 -0.423 0.250814147769729 0.00330835537566859 -1.28571781659241 -4.9881138740902 Q5PRF9 SAMD4B Q5PRF9.S271.p_SAMD4B Q5PRF9_S271s _1_1_271_271 Q5PRF9 Q5PRF9|M0QZ22|A0A087WZT0|M0R0X3 Protein Smaug homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14992.14992.3 30.1 30.1 2.448 11 1 1 0 1185.8739 3475.6411 S271s TMT10 260 (R) AAFTTPDHAPLsPQSSVASSGSEQTEEQGSSR (N) AAFT(0.0)T(0.0)PDHAPLS(0.99)PQS(0.0)S(0.0)VAS(0.0)S(0.0)GS(0.0)EQT(0.0)EEQGS(0.0)S(0.0)R s:Phosphorylated S SAMD4B 75938.6 2 4 1599.1 128.75 HUMAN 1 -6.0065 -24.8039 TPDKITNSGQRRKKL-p Q02156;S316-p TPDKITNSGQRRKKL 0.84666530857362 0.380283383791456 -0.035 -0.105333333333333 1.39886086418273 5.58136612762807 -0.035 -0.105333333333333 0.724626001445665 0.276607140617881 -0.371138473046523 -1.20934135318806 Q02156 PRKCE Q02156.S316.p_PRKCE Q02156_T309tS316s_2_2_309_316 Q02156 Q02156|E9PBI2 Protein kinase C epsilon type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25214.25214.3 10.05 10.05 2.535 3 2 2 0 834.766 2342.3444 T309t S316s TMT10 302 (K) VLADLGVtPDKITNsGQR (R) VLADLGVT(0.99)PDKIT(0.0)NS(0.99)GQR K:TMT10,t:Phosphorylated T,s:Phosphorylated S PRKCE 85041.6 1 8 1089.1 179.15 HUMAN 1 -1.3989 -5.5814 TPDKVQMTWTREKLI-p A0A0G2JNW7;T980-p TPDKVQMTWTREKLI 0.30236319502448 0.0366809924857493 -0.322666666666667 0.504 9.73365717088218 19.3127282459431 -0.322666666666667 0.504 0.106324728621057 0.0117145922150585 -1.93547251174864 3.72964425408073 A0A0G2JNW7 NotFound A0A0G2JNW7.T980.p_NotFound A0A0G2JNW7_T980t _1_1_980_980 A0A0G2JNW7 Q9Y666|A0A0G2JNW7 Solute carrier family 12 member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16978.17181.3 11.25 11.25 1.137 4 1 1 0 799.0802 2315.2582 T980t TMT10 968 (R) TQAPPTPDKVQMtWTR (E) T(0.0)QAPPT(0.0)PDKVQMT(0.99)WT(0.0)R K:TMT10,t:Phosphorylated T SLC12A7 120389 7 8 1247.2 162.14 HUMAN 1 -9.7337 19.3127 TPDSLGHTPPARGEE-p P35568;T453-p TPDSLGHTPPARGEE 0.898481077862575 0.474908078107768 -0.0186666666666667 -0.077 0.91121553600648 4.31263864904716 -0.0186666666666667 -0.077 0.810734111744754 0.370455575182155 -0.251457067924726 -0.976263631916024 P35568 IRS1 P35568.T453.p_IRS1 P35568_T453t _1_1_453_453 P35568 P35568 Insulin receptor substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20966.20966.5 19.38 19.38 2.23 6 1 1 0 708.9466 3460.7241 T453t TMT10 444 (R) SVTPDSLGHtPPARGEEELSNYICMGGK (G) S(0.0)VT(0.0)PDS(0.0)LGHT(0.99)PPARGEEELS(0.0)NY(0.0)ICMGGK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T IRS1 132786.8 4 8 229.1 423.14 HUMAN 1 -0.9112 -4.3126 TPEEAESSEDEAGPW-p Q96NA2;S315-p TPEEAESSEDEAGPW 0.796323249979386 0.254409386599836 0.0416666666666667 0.145666666666667 1.9071393267264 7.83109249114213 0.0416666666666667 0.145666666666667 0.644593715955768 0.16477478395494 0.488137739939324 1.60534781377743 Q96NA2 RILP Q96NA2.S315.p_RILP Q96NA2_S314sS315s_2_2_314_315 Q96NA2 Q96NA2|Q96NA2-2 Rab-interacting lysosomal protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.30234.30234.4 15.48 13.29 6.079 5 2 2 0 1152.7902 4448.2059 S314s S315s TMT10 305 (K) MLGTPEEAEssEDEAGPWILLSDDKGDHPPPPESK (I) MLGT(0.0)PEEAES(0.99)S(0.99)EDEAGPWILLS(0.0)DDKGDHPPPPES(0.0)K K:TMT10,s:Phosphorylated S RILP 44370.8 1 3 4820.1 26.28 HUMAN 1 1.9071 7.8311 TPEELDDSDFETEDF-p P35221;S641-p TPEELDDSDFETEDF 0.569012171547148 0.140958989615499 0.079 0.195 4.50591637806876 11.2122157285607 0.079 0.195 0.354330357323697 0.0756446864660145 1.01268243961177 2.19231976102444 P35221 CTNNA1 P35221.S641.p_CTNNA1 P35221_S641s _1_1_641_641 P35221 P35221-2|G3XAM7|P35221-3 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20861.20861.2 22.69 22.69 5.044 3 1 1 0 1119.9366 2158.8935 S641s Hydrogen 634 (R) TPEELDDsDFETEDFDVR (S) T(0.0)PEELDDS(0.99)DFET(0.0)EDFDVR s:Phosphorylated S CTNNA1 100754.2 25 13 169.1 491.55 HUMAN 1 4.5059 11.2122 TPEENQASWAKSAGA-p Q9UK76;S61-p TPEENQASWAKSAGA 0.638563824318686 0.0226339610131703 0.07 -0.401 3.63371356493988 22.4673955437605 0.07 -0.401 0.433140350375287 0.00566578963567951 0.846432366031844 -4.42482917192693 Q9UK76 HN1 Q9UK76.S61.p_HN1 Q9UK76_S61s _1_1_61_61 Q9UK76 Q9UK76-2|Q9UK76-3|J3KT51 Jupiter microtubule associated homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25801.25801.3 16.89 16.89 2.824 3 1 1 0 840.4086 2439.2379 S61s TMT10 47 (K) MASNIFGTPEENQAsWAK (S) MAS(0.0)NIFGT(0.0)PEENQAS(0.99)WAK K:TMT10,s:Phosphorylated S JPT1 16014.2 1 5 705.1 239.23 HUMAN 1 3.6337 -22.4674 TPEKTVDSQGPTPVC-p Q9BYG3;S230-p TPEKTVDSQGPTPVC 0.237800187730078 0.843805929805295 0.187666666666667 -0.0196666666666666 11.9521289697693 1.03586408837809 0.187666666666667 -0.0196666666666666 0.0637950677551187 0.78779567311382 2.3238464761786 -0.282822526062222 Q9BYG3 NIFK Q9BYG3.S230.p_NIFK Q9BYG3_S230s _1_1_230_230 Q9BYG3 Q9BYG3 MKI67 FHA domain-interacting nucleolar phosphoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22078.22078.3 11.72 11.72 1.158 5 1 1 0 772.0393 2234.1324 S230s TMT10 227 (K) TVDsQGPTPVCTPTFLER (R) T(0.0)VDS(0.99)QGPT(0.0)PVCT(0.0)PT(0.0)FLER C:Carbamidomethylation,s:Phosphorylated S NIFK 34392.7 1 3 1531.1 133.75 HUMAN 1 11.9521 -1.0359 TPENHPETPKKKSDP-p Q6KC79;T599-p TPENHPETPKKKSDP 0.662291570491154 0.00229157720807913 -0.07 -1.03666666666667 3.35259422547877 40.719734744961 -0.07 -1.03666666666667 0.462104904044427 8.4727916202441e-05 -0.791161802349381 -10.4598765110934 Q6KC79 NIPBL Q6KC79.T599.p_NIPBL Q6KC79_T599t _1_1_599_599 Q6KC79 Q6KC79 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.4850.4850.3 15.31 15.31 8.027 3 1 1 0 592.2985 1694.9114 T599t TMT10 591 (K) STPENHPEtPK (K) S(0.0)T(0.0)PENHPET(0.99)PK K:TMT10,t:Phosphorylated T NIPBL 318099.5 5 11 50.1 752.87 HUMAN 1 -3.3526 -40.7197 TPENNKEYAKVSGVM-p P16471;Y546-p TPENNKEYAKVSGVM 0.423631168122057 0.0338648758153683 0.14 -0.485666666666667 6.87401534095754 19.8204803172269 0.14 -0.485666666666667 0.205399066700991 0.010422021584529 1.4389417414244 -3.8369796459923 P16471 PRLR P16471.Y546.p_PRLR P16471_Y546y _1_1_546_546 P16471 P16471|P16471-2 Prolactin receptor GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8859.8859.4 14.22 14.22 14.219 2 1 1 0 618.8474 2392.4006 Y546y TMT10 536 (K) KPGTPENNKEyAK (V) KPGT(0.0)PENNKEY(0.99)AK K:TMT10,y:Phosphorylated Y PRLR 70474.2 2 2 82.1 31.46 HUMAN 1 6.874 -19.8205 TPEPRPATPGASSVE-p Q9H3U1;T15-p TPEPRPATPGASSVE 0.894456285321847 0.293704616414238 -0.022 -0.147 0.94736833394131 7.02292387580821 -0.022 -0.147 0.804013177243781 0.198475823435615 -0.260623718362927 -1.464619352346 Q9H3U1 UNC45A Q9H3U1.T15.p_UNC45A Q9H3U1_T15t _1_1_15_15 Q9H3U1 Q9H3U1 Protein unc-45 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9401.9401.3 15.1 15.1 15.098 3 1 1 0 583.9749 1669.9435 T15t Hydrogen 13 (R) PAtPGASSVEQLRK (E) PAT(0.99)PGAS(0.0)S(0.0)VEQLRK K:TMT10-Lys-Only,t:Phosphorylated T UNC45A 104330.3 6 1 2206.1 93.47 HUMAN 1 -0.9474 -7.0229 TPEQSKRSTMVGTPY-p Q13177;S401-p TPEQSKRSTMVGTPY 0.165364843830317 0.23018396451088 -0.223 -0.158 15.646515443354 8.40345696838879 -0.223 -0.158 0.0272488674087906 0.144428966371074 -3.00060802986108 -1.70451840449216 Q13177 PAK2 Q13177.S401.p_PAK2 Q13177_S401s _1_1_401_401 Q13177 O75914-3|O75914-4|Q13153-2|O75914-2|A0A087X294|Q13177|B3KNX7|E9PM17 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28734.28734.2 15.14 15.14 2.343 5 1 1 0 1117.5333 2154.0925 S401s TMT10 401 (R) sTMVGTPYWMAPEVVTR (K) S(0.99)T(0.0)MVGT(0.0)PY(0.0)WMAPEVVT(0.0)R s:Phosphorylated S PAK2 58326.8 9 33 272.1 393.22 HUMAN 1 -15.6465 -8.4035 TPERNPITPVKFVDR-p Q96AV8;T68-p TPERNPITPVKFVDR 0.0658438295661245 0.000952253650599092 -0.637333333333333 -2.24733333333333 25.5070438963393 57.7596510928094 -0.637333333333334 -2.24733333333333 0.00281381545291319 1.67507744441569e-06 -5.17335235548879 -21.9169540053282 Q96AV8 E2F7 Q96AV8.T68.p_E2F7 Q96AV8_T61tT68t_2_2_61_68 Q96AV8 Q96AV8|Q96AV8-3|Q96AV8-2 Transcription factor E2F7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15389.15389.4 7.98 7.98 99 2 2 2 0 594.3278 2214.3577 T61t T68t TMT10 59 (K) KFtPERNPItPVK (F) KFT(1.0)PERNPIT(1.0)PVK K:TMT10,t:Phosphorylated T E2F7 100342.7 1 9 2042.1 101.08 HUMAN 1 -25.507 -57.7597 TPESQPDTPPGTPLV-p Q96T60;T118-p TPESQPDTPPGTPLV 0.359362450321461 0.091724797029073 0.137 0.19 8.25785168865371 13.7226133234338 0.137 0.19 0.149353302833368 0.0424364130247703 1.67986390330021 2.64058344224394 Q96T60 PNKP Q96T60.T118.p_PNKP Q96T60_T118t _1_1_118_118 Q96T60 Q96T60|M0QYH2|A0A0D9SFL2 Bifunctional polynucleotide phosphatase/kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16345.16345.5 23.93 22.85 2.832 5 1 1 0 740.7884 3619.9422 T118t TMT10 111 (R) TPESQPDtPPGTPLVSQDEKRDAELPK (K) T(0.0)PES(0.0)QPDT(0.99)PPGT(0.0)PLVS(0.0)QDEKRDAELPK K:TMT10,t:Phosphorylated T PNKP 57588.8 13 1 1712.1 119.92 HUMAN 1 8.2579 13.7226 TPESWRLTPPAKVGG-p Q08050-3;T665-p TPESWRLTPPAKVGG 0.233628206047255 0.00238856624082869 0.173666666666667 -1.108 12.1062020430408 40.2422248890956 0.173666666666667 -1.108 0.0615715087513788 9.45752528551722e-05 2.35118611964254 -10.2408523749941 Q08050 FOXM1 Q08050.3.T665.p_FOXM1 Q08050-3_T665t _1_1_665_665 Q08050-3 Q08050-3|Q08050-2|A0A0D9SFF0 Isoform 4 of Forkhead box protein M1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18250.18460.3 13.79 7.91 3.812 3 1 1 0 641.0171 1841.0685 T665t TMT10 658 (R) TPESWRLtPPAK (V) T(0.0)PES(0.0)WRLT(0.99)PPAK K:TMT10,t:Phosphorylated T FOXM1 89107.7 2 5 1076.1 180.52 HUMAN 1 12.1062 -40.2422 TPFGRSESAPTLHPY-p Q8WUF5;S102-p TPFGRSESAPTLHPY 0.787952750145453 0.111211777557805 0.0396666666666666 0.178333333333333 1.99518362177569 12.590356837424 0.0396666666666666 0.178333333333333 0.631657471944119 0.055076244123104 0.507735154576281 2.43622014074746 Q8WUF5 PPP1R13L Q8WUF5.S102.p_PPP1R13L Q8WUF5_S102s _1_1_102_102 Q8WUF5 Q8WUF5 RelA-associated inhibitor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17716.17716.3 19.12 19.12 1.11 6 1 1 0 750.3919 2169.1956 S102s TMT10 100 (R) SEsAPTLHPYSPLSPK (G) S(0.0)ES(0.99)APT(0.0)LHPY(0.0)S(0.0)PLS(0.0)PK K:TMT10,s:Phosphorylated S PPP1R13L 89431.8 5 4 371.1 339.39 HUMAN 1 1.9952 12.5904 TPFNYNPSPRKSSAD-p P25054;S2789-p TPFNYNPSPRKSSAD 0.181080338359562 0.00308349007527124 -0.230666666666667 -0.76 14.6348501608576 37.7309777727682 -0.230666666666667 -0.76 0.0343965578586046 0.000168617335673828 -2.8102434313653 -9.15615978292391 P25054 APC P25054.S2789.p_APC P25054_S2789s _1_1_2789_2789 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18121.18121.2 10.59 10.59 5.214 3 1 1 0 800.8905 1520.8059 S2789s TMT10 2781 (R) VTPFNYNPsPR (K) VT(0.0)PFNY(0.0)NPS(0.99)PR s:Phosphorylated S APC 313808.5 3 53 33.1 890.71 HUMAN 1 -14.6349 -37.731 TPFPAEPTENRERTA-p A0A1B0GV46;T808-p TPFPAEPTENRERTA 0.992821359885708 0.012159953222783 0.00999999999999994 0.594 0.064122107717434 26.7370856639142 0.00999999999999986 0.594 0.985343802206808 0.00211978313999982 0.0192339114025736 5.49013204941017 A0A1B0GV46 NotFound A0A1B0GV46.T808.p_NotFound A0A1B0GV46_T800tT801tT808t_3_3_800_808 A0A1B0GV46 A0A1B0GV46 Diffuse panbronchiolitis critical region protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11860.11860.5 8.46 5.44 1.247 9 3 3 0 939.9993 4453.2069 N778n N780n N797n T800t T801t T808t Hydrogen 774 (R) TPLAnEnTTLSPAEPTENRERTAnEKttPFPAEPtENR (E) T(0.0)PLAN(0.99)EN(0.99)T(0.0)T(0.0)LS(0.0)PAEPT(0.0)EN(0.0)RERT(0.0)AN(0.99)EKT(0.99)T(0.99)PFPAEPT(0.99)EN(0.0)R K:TMT10-Lys-Only,n:Deamidated,t:Phosphorylated T DPCR1 158728 1 4 5532.1 18.44 HUMAN 1 0.0641 26.7371 TPFSVRRSWDSLNED-p Q8IY42;S238-p TPFSVRRSWDSLNED 0.642148346575429 0.0758139505353145 0.0843333333333333 0.348666666666667 3.59503998207284 14.870544491325 0.0843333333333333 0.348666666666667 0.437014655802311 0.0325795852190127 0.838883836935132 2.85236514991217 Q8IY42 C4orf19 Q8IY42.S238.p_C4orf19 Q8IY42_S238s _1_1_238_238 Q8IY42 Q8IY42 Uncharacterized protein C4orf19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36462.36462.3 20.57 18.04 1.289 4 1 1 0 1018.1472 2972.4599 S238s TMT10 238 (R) sWDSLNEDVETEVLSICFNEK (G) S(0.99)WDS(0.0)LNEDVET(0.0)EVLS(0.0)ICFNEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S C4orf19 34254.4 3 6 703.1 239.48 HUMAN 1 3.595 14.8705 TPGDAQGSPPELKRP-p Q13112;S538-p TPGDAQGSPPELKRP 0.543328167061294 0.0536188072144384 0.11 -0.329333333333333 4.89058766498378 16.9400283410452 0.11 -0.329333333333333 0.324295732347633 0.020230059769699 1.0839690576716 -3.24836786833874 Q13112 CHAF1B Q13112.S538.p_CHAF1B Q13112_S538s _1_1_538_538 Q13112 Q13112 Chromatin assembly factor 1 subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22721.22721.5 24.05 24.05 2.753 14 1 1 0 1099.5814 5413.8743 S538s Hydrogen 500 (R) INLTPLKTDTPPSSVPTSVISTPSTEEIQSETPGDAQGsPPELKRPR (L) INLT(0.0)PLKT(0.0)DT(0.0)PPS(0.0)S(0.0)VPT(0.0)S(0.0)VIS(0.0)T(0.0)PS(0.0)T(0.0)EEIQS(0.0)ET(0.0)PGDAQGS(0.99)PPELKRPR K:TMT10-Lys-Only,s:Phosphorylated S CHAF1B 61947.8 9 8 1182.1 168.89 HUMAN 1 4.8906 -16.94 TPGEYGDSPVPTPRS-p Q9HCK8;S2211-p TPGEYGDSPVPTPRS 0.235548501295882 0.0754665741918853 0.246333333333333 0.257 12.0307280368311 14.8963815744663 0.246333333333333 0.257 0.0626508830011351 0.0323863378861676 2.3377860532811 2.85719129084615 Q9HCK8 CHD8 Q9HCK8.S2211.p_CHD8 Q9HCK8_S2211s _1_1_2211_2211 Q9HCK8 Q9HCK8|Q9HCK8-2 Chromodomain-helicase-DNA-binding protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23933.23933.4 27.71 27.71 2.687 8 1 1 0 1036.0127 4061.06 S2211s TMT10 2181 (R) RSQEMVTGGILGPGNHLLDSPSLTPGEYGDsPVPTPR (S) RS(0.0)QEMVT(0.0)GGILGPGNHLLDS(0.0)PS(0.0)LT(0.0)PGEY(0.0)GDS(0.99)PVPT(0.0)PR s:Phosphorylated S CHD8 292339.6 5 10 419.1 320.67 HUMAN 1 12.0307 14.8964 TPGFSVQSISDFEKF-p Q9NY61;S153-p TPGFSVQSISDFEKF 0.490461337009155 0.0141675551185305 0.103 0.762666666666667 5.70105003495741 25.6404743620698 0.103 0.762666666666667 0.269088412469446 0.00272867972402343 1.23111952718843 5.20113022642665 Q9NY61 AATF Q9NY61.S153.p_AATF Q9NY61_S153s _1_1_153_153 Q9NY61 Q9NY61 Protein AATF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26498.26512.3 17.47 17.47 1.968 4 1 1 0 694.0168 2000.0741 S153s TMT10 146 (K) TPGFSVQsISDFEK (F) T(0.0)PGFS(0.0)VQS(0.99)IS(0.0)DFEK K:TMT10,s:Phosphorylated S AATF 63245.9 1 2 2183.1 94.22 HUMAN 1 5.7011 25.6405 TPGLKSNTPTPRNDA-p H0YL70;T329-p TPGLKSNTPTPRNDA 0.145152146047681 0.936382387574165 0.488666666666667 -0.0253333333333334 17.0939339750722 0.403265156180997 0.488666666666667 -0.0253333333333333 0.0195256995560635 0.911325419942962 3.28115885754479 -0.11666453189916 H0YL70 TLE3 H0YL70.T329.p_TLE3 H0YL70_T329t _1_1_329_329 H0YL70 H0YL70|H0YKN8|H0YKT5|Q04726|Q04726-4|A0A0D9SES8|Q04726-5|Q04726-6|Q04726-3|Q04726-7|Q04726-2|H0YNT2|F5H7D6|H0YLW9|H0YKH0 Transducin-like enhancer protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8938.8938.3 9.74 9.74 2.131 8 1 1 0 849.7521 2467.2738 T329t TMT10 327 (K) SNtPTPRNDAPTPGTSTTPGLR (S) S(0.0)NT(0.99)PT(0.0)PRNDAPT(0.0)PGT(0.0)S(0.0)T(0.0)T(0.0)PGLR t:Phosphorylated T TLE3 85275.2 6 8 447.1 309.48 HUMAN 1 17.0939 -0.4033 TPGPSEESMTDEKTT-p P46013;S1118-p TPGPSEESMTDEKTT 0.941853093259286 0.00949153116870816 0.013 -0.45 0.511636966652032 28.5408740605374 0.013 -0.45 0.888866018438774 0.00139930567014472 0.146452075198342 -5.99128231601252 P46013 MKI67 P46013.S1118.p_MKI67 P46013_S1118s _1_1_1118_1118 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21510.21510.3 16.62 16.62 1.842 4 1 1 0 821.7195 2383.1739 S1118s TMT10 1107 (K) ELFQTPGPSEEsMTDEK (T) ELFQT(0.0)PGPS(0.0)EES(0.99)MT(0.0)DEK K:TMT10,s:Phosphorylated S MKI67 360912.4 1 27 5.1 1918.46 HUMAN 1 0.5116 -28.5409 TPGQLLKTWCGSPPY-p H0Y494;T221-p TPGQLLKTWCGSPPY 0.162446463588187 0.00917359434218356 -0.384 0.689333333333333 15.8051724713466 28.7993788100505 -0.384 0.689333333333334 0.0262713719291051 0.00131844530793462 -3.03087009831935 6.06587566570965 H0Y494 SIK3 H0Y494.T221.p_SIK3 H0Y494_T221t _1_1_221_221 H0Y494 J3KPC8|Q9Y2K2|H0Y494|Q9Y2K2-4|Q9Y2K2-3 Serine/threonine-protein kinase SIK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28776.28776.3 16.48 16.48 1.127 3 1 1 0 816.7288 2368.2048 T221t TMT10 221 (K) tWCGSPPYAAPELFEGK (E) T(0.99)WCGS(0.0)PPY(0.0)AAPELFEGK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T SIK3 139782.1 5 2 1025.2 187.04 HUMAN 1 -15.8052 28.7994 TPGSLFLSPPAPAPK-p Q9H4A3-7;S19-p TPGSLFLSPPAPAPK 0.659092878223927 0.00721560369460768 -0.062 -0.629333333333333 3.39647250091573 30.6458112841659 -0.062 -0.629333333333333 0.45745960422666 0.000861824570457532 -0.799851472911085 -6.62025294294228 Q9H4A3 WNK1 Q9H4A3.7.S19.p_WNK1 Q9H4A3-7_S19s _1_1_19_19 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24631.24631.3 15.08 15.08 4.217 5 1 1 0 774.0825 2240.2691 S19s TMT10 9 (K) QSSTPGSLFLsPPAPAPK (N) QS(0.0)S(0.0)T(0.0)PGS(0.0)LFLS(0.99)PPAPAPK K:TMT10,s:Phosphorylated S WNK1 301202.7 1 2 162.1 495.27 HUMAN 1 -3.3965 -30.6458 TPGSNRSSPGNKDKE-p O15231-4;S248-p TPGSNRSSPGNKDKE 0.337842177939104 0.63102673367222 0.171 -0.057 8.77757043899222 2.71813439805352 0.171 -0.057 0.132508261500442 0.534794041924317 1.76986005488711 -0.662468667251235 O15231 ZNF185 O15231.4.S248.p_ZNF185 O15231-4_S248s _1_1_248_248 O15231-4 O15231-4|O15231-5 Isoform 4 of Zinc finger protein 185 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3699.3699.3 11.49 5.89 1.372 5 1 1 0 609.6443 1746.9499 S248s TMT10 240 (R) STPGSNRSsPGNK (D) S(0.0)T(0.0)PGS(0.0)NRS(0.0)S(0.99)PGNK K:TMT10,s:Phosphorylated S ZNF185 68135.9 7 23 166.3 494.62 HUMAN 1 8.7776 -2.7181 TPGSPPVSPGPLSPG-p Q8IUW5;S161-p TPGSPPVSPGPLSPG 0.514851513543117 0.214256298398006 -0.0896666666666667 -0.124666666666667 5.32355655193457 8.80509824989325 -0.0896666666666667 -0.124666666666667 0.293524491804854 0.131671012461748 -1.1630348277463 -1.77400200195822 Q8IUW5 RELL1 Q8IUW5.S161.p_RELL1 Q8IUW5_S161s _1_1_161_161 Q8IUW5 Q8IUW5 RELT-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26563.26563.4 21.29 21.29 1.304 10 1 1 0 1050.5226 4119.0996 S161s TMT10 136 (K) AMVADNSLYDPESPVTPSTPGSPPVsPGPLSPGGTPGK (H) AMVADNS(0.0)LY(0.0)DPES(0.0)PVT(0.0)PS(0.0)T(0.0)PGS(0.0)PPVS(0.99)PGPLS(0.0)PGGT(0.0)PGK K:TMT10,s:Phosphorylated S RELL1 29624.9 4 3 2329.1 87.71 HUMAN 1 -5.3236 -8.8051 TPGSRIESILMSLPL-p P36551;S416-p TPGSRIESILMSLPL 0.887489214864685 0.977636711113306 -0.208 -0.0123333333333333 1.01017351526612 0.14072486938712 -0.208 -0.0123333333333333 0.792469668016864 0.96811625706193 -0.276428403359728 -0.0418498959037502 P36551 CPOX P36551.S416.p_CPOX P36551_S416s _1_1_416_416 P36551 P36551 Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.37129.37129.3 16.69 16.95 5.628 3 1 1 0 584.9885 1672.9869 S416s TMT10 414 (R) IEsILMSLPLTAR (W) IES(0.99)ILMS(0.0)LPLT(0.0)AR s:Phosphorylated S CPOX 50949.8 1 1 5277.1 21.05 HUMAN 1 -1.0102 -0.1407 TPGVDAPSWLEEQ__-p P53367;S368-p TPGVDAPSWLEEQ__ 0.16489440730898 0.241037967068421 0.233 0.164 15.6742690839369 8.14015585019619 0.233 0.164 0.0270752884171619 0.153456191277735 3.00589343852069 1.65892995201528 P53367 ARFIP1 P53367.S368.p_ARFIP1 P53367_S368s _1_1_368_368 P53367 P53367|P53367-2|P53367-3 Arfaptin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.26146.26146.3 9.5 9.5 9.497 2 1 1 0 736.7184 2128.169 S368s TMT10 359 (K) LKTPGVDAPsWLEEQ (-) LKT(0.0)PGVDAPS(0.99)WLEEQ K:TMT10,s:Phosphorylated S ARFIP1 41794.6 1 5 1635.1 125.02 HUMAN 1 15.6743 8.1402 TPHLPPCSPPKQGKK-p Q99741;S74-p TPHLPPCSPPKQGKK 0.651183474642633 0.00203605351766751 0.067 -0.866666666666667 3.49506669688714 41.9572866757867 0.067 -0.866666666666667 0.447191283984329 6.37193493397964e-05 0.819290725422583 -11.0477371364452 Q99741 CDC6 Q99741.S74.p_CDC6 Q99741_S74s _1_1_74_74 Q99741 Q99741 Cell division control protein 6 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15096.15096.5 13.88 13.88 3.485 2 1 1 0 714.7842 3489.9116 S74s TMT10 59 (R) LGDDNLCNTPHLPPCsPPKQGKK (E) LGDDNLCNT(0.0)PHLPPCS(0.99)PPKQGKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CDC6 63689.1 4 3 1629.1 125.37 HUMAN 1 3.4951 -41.9573 TPHNKAKSPGVRQPG-p Q68D10;S365-p TPHNKAKSPGVRQPG 0.971210422298116 0.0971153040652707 0.00599999999999999 -0.295333333333333 0.248178686546665 13.3891157049256 0.00599999999999999 -0.295333333333333 0.944456872882281 0.0458235181444105 0.0729627362247592 -2.57995913677567 Q68D10 SPTY2D1 Q68D10.S365.p_SPTY2D1 Q68D10_S365s _1_1_365_365 Q68D10 Q68D10|Q68D10-2 Protein SPT2 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.4344.4344.3 7.8 2.54 99 1 1 1 0 418.2437 1172.7516 S365s TMT10 363 (K) AKsPGVR (Q) AKS(1.0)PGVR K:TMT10,s:Phosphorylated S SPTY2D1 75711.5 2 2 4630.1 28.61 HUMAN 1 0.2482 -13.3891 TPIAGRFTPGTFTNQ-p P08865;T104-p TPIAGRFTPGTFTNQ 0.298154233310149 0.668684537466373 0.15 0.0663333333333333 9.88423513251277 2.39142728856842 0.15 0.0663333333333333 0.102701429067136 0.576576942927097 1.96160498848652 0.593767490475425 P08865 RPSA P08865.T104.p_RPSA P08865_T104t _1_1_104_104 P08865 A0A0C4DG17|P08865 40S ribosomal protein SA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30851.30851.4 11.62 6.18 1.75 5 1 1 0 894.4583 3494.8494 T104t TMT10 90 (K) FAAATGATPIAGRFtPGTFTNQIQAAFREPR (L) FAAAT(0.0)GAT(0.0)PIAGRFT(0.99)PGT(0.0)FT(0.0)NQIQAAFREPR t:Phosphorylated T RPSA 32967.6 1 3 3641.1 46.26 HUMAN 1 9.8842 2.3914 TPIRDSHSPDLQLPT-p H3BQK9;S7455-p TPIRDSHSPDLQLPT 0.204386553887756 0.0955923433701338 -0.198 -0.270333333333333 13.3529788910377 13.4831160919381 -0.198 -0.270333333333333 0.0462063976061992 0.0448423527599213 -2.57487064587209 -2.59700854309886 H3BQK9 NotFound H3BQK9.S7455.p_NotFound H3BQK9_S7455s _1_1_7455_7455 H3BQK9 H3BQK9|H3BPE1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20966.20966.5 23.19 17.62 1.108 7 1 1 0 665.7511 3244.7578 S7455s TMT10 7446 (K) AGTPIRDSHsPDLQLPTPEVIPSSGSK (L) AGT(0.0)PIRDS(0.0)HS(0.99)PDLQLPT(0.0)PEVIPS(0.0)S(0.0)GS(0.0)K K:TMT10,s:Phosphorylated S MACF1 866539.7 3 11 472.1 301.95 HUMAN 1 -13.353 -13.4831 TPKAGVLTPPDLGPH-p I3L2J0;T674-p TPKAGVLTPPDLGPH 0.658328030598573 0.365879588688798 0.0763333333333333 -0.095 3.40746015428815 5.78899779916289 0.0763333333333334 -0.0949999999999999 0.456303693957503 0.263693982975264 0.802023719771583 -1.24659572642782 I3L2J0 NotFound I3L2J0.T674.p_NotFound I3L2J0_T674t _1_1_674_674 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18376.18582.3 18.5 18.5 99 1 1 1 0 732.3911 2115.1912 T674t TMT10 670 (K) AGVLtPPDLGPHPPPPAPR (E) AGVLT(1.0)PPDLGPHPPPPAPR t:Phosphorylated T CIC 259056.7 2 12 23.1 999.57 HUMAN 1 3.4075 -5.789 TPKEEAQSLEDLAGF-p P46013;S1098-p TPKEEAQSLEDLAGF 0.512156146242886 0.00465998348388827 -0.100333333333333 -0.659 5.37203231161388 34.1067037067437 -0.100333333333333 -0.659 0.290266401452865 0.00038844508378327 -1.17181910005656 -7.77108047996558 P46013 MKI67 P46013.S1098.p_MKI67 P46013_S1098s _1_1_1098_1098 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.24210.24210.3 14.72 14.72 6.806 2 1 1 0 844.1203 2450.3746 S1098s TMT10 1091 (R) TPKEEAQsLEDLAGFK (E) T(0.0)PKEEAQS(0.99)LEDLAGFK K:TMT10,s:Phosphorylated S MKI67 360912.4 2 26 5.1 1918.46 HUMAN 1 -5.372 -34.1067 TPKESGNSQELARGP-p Q86W50;S419-p TPKESGNSQELARGP 0.593686393732298 0.0111912357624314 0.074 0.58 4.1760860310527 27.3230206144088 0.074 0.58 0.382288643589156 0.00185224289929625 0.950642475429861 5.64930479604997 Q86W50 METTL16 Q86W50.S419.p_METTL16 Q86W50_S419s _1_1_419_419 Q86W50 Q86W50 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5157.5157.2 14.71 6.62 2.073 2 1 1 0 700.325 1319.6753 S419s TMT10 415 (K) ESGNsQELAR (G) ES(0.0)GNS(0.99)QELAR s:Phosphorylated S METTL16 64418.6 2 4 1049.1 183.96 HUMAN 1 4.1761 27.323 TPKHQPGSPRGSGRE-p Q9Y548;S43-p TPKHQPGSPRGSGRE 0.286012107084712 0.0683902820958578 0.230666666666667 -0.251 10.2568905859515 15.4988682242892 0.230666666666667 -0.251 0.0942564201785862 0.0281911750035154 2.02637860407463 -2.97053051623398 Q9Y548 YIPF1 Q9Y548.S43.p_YIPF1 Q9Y548_S43s_1_1_43_43 Q9Y548 Q9Y548 Protein YIPF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29378.29378.5 18.52 17.39 0 7 1 1 0 992.8677 4879.3496 N22n S43s Acetyl 2 (M) AAVDDLQFEEFGNAATSLTAnPDATTVNIEDPGETPKHQPGsPR (G) AAVDDLQFEEFGN(0.50)AAT(0.0)S(0.0)LT(0.0)AN(0.50)PDAT(0.0)T(0.0)VN(0.0)IEDPGET(0.0)PKHQPGS(0.99)PR K:TMT10,n:Deamidated,s:Phosphorylated S YIPF1 34447 5 1 3721.1 44.55 HUMAN 1 10.2569 -15.4989 TPKKLFTSPLCDVSK-p Q7Z2Z1;S1314-p TPKKLFTSPLCDVSK 0.123781235897274 0.00102061937163994 -0.279666666666667 -1.25633333333333 18.8637054527413 51.8154019214073 -0.279666666666667 -1.25633333333333 0.0129906073082358 6.58354499164307e-06 -3.63922118307568 -16.9728499150409 Q7Z2Z1 TICRR Q7Z2Z1.S1314.p_TICRR Q7Z2Z1_S1314s _1_1_1314_1314 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21618.21618.5 13.28 13.28 1.172 4 1 1 0 602.1466 2926.7358 S1314s TMT10 1311 (K) LFTsPLCDVSKKSPFRK (S) LFT(0.0)S(0.99)PLCDVS(0.0)KKS(0.0)PFRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TICRR 212850 2 16 238.1 417.32 HUMAN 1 -18.8637 -51.8154 TPKKLGNSLLRRGAS-p Q14980;S2062-p TPKKLGNSLLRRGAS 0.176527526104725 0.104801957629519 0.289666666666667 0.227666666666667 14.9436564650281 12.9441332205185 0.289666666666667 0.227666666666667 0.0320357099922487 0.0507676052606268 2.86789055991258 2.49964047246163 Q14980 NUMA1 Q14980.S2062.p_NUMA1 Q14980_S2062s _1_1_2062_2062 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14495.14495.2 8.74 8.74 99 1 1 1 0 719.9302 1358.8884 S2062s TMT10 2058 (K) KLGNsLLR (R) KLGNS(1.0)LLR K:TMT10,s:Phosphorylated S NUMA1 239339.3 2 36 31.1 900.97 HUMAN 1 14.9437 12.9441 TPKPVINSTPGRTPL-p Q99459;S437-p TPKPVINSTPGRTPL 0.0741090610494485 0.142442392446714 -0.514333333333333 0.162666666666667 24.2349214743131 11.1526285984115 -0.514333333333334 0.162666666666667 0.0037714456417891 0.0766897178860185 -4.8525793711893 2.18187094095611 Q99459 CDC5L Q99459.S437.p_CDC5L Q99459_S427sS437sT438t_3_3_427_438 Q99459 Q99459 Cell division cycle 5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13859.13859.5 8.19 8.19 1.267 6 3 3 0 630.7266 2909.714 S427s S437s T438t TMT10 427 (R) sGTTPKPVINstPGRTPLRDK (L) S(0.99)GT(0.0)T(0.0)PKPVINS(0.99)T(0.99)PGRT(0.0)PLRDK K:TMT10,s:Phosphorylated S,t:Phosphorylated T CDC5L 92477.2 2 19 751.1 232.35 HUMAN 1 -24.2349 11.1526 TPKRRRASSLSRDAE-p Q9Y259;S39-p TPKRRRASSLSRDAE 0.0884809517257935 0.365093245826964 0.444666666666667 0.187333333333333 22.4396888148728 5.80110105099887 0.444666666666667 0.187333333333333 0.00570205127738442 0.26296012341451 4.42320568565797 1.24876124427166 Q9Y259 CHKB Q9Y259.S39.p_CHKB Q9Y259_S39s _1_1_39_39 Q9Y259 Q9Y259|Q9Y259-2 Choline/ethanolamine kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3426.3426.3 7.46 7.46 1.116 3 1 1 0 362.5271 1005.6003 S39s TMT10 37 (R) RAsSLSR (D) RAS(0.99)S(0.0)LS(0.0)R s:Phosphorylated S CHKB 45612.9 2 1 7147.1 7.46 HUMAN 1 22.4397 5.8011 TPKTERDTPGHGSGW-p O75533;T303-p TPKTERDTPGHGSGW 0.392421309375838 0.926074805328137 0.157 -0.0113333333333333 7.49332019655287 0.471253080970265 0.157 -0.0113333333333333 0.178101665336313 0.897169894428969 1.54711947322219 -0.135413963357651 O75533 SF3B1 O75533.T303.p_SF3B1 O75533_T303t _1_1_303_303 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8621.8621.5 16.14 13.55 1.127 5 1 1 0 684.533 3338.6667 T303t TMT10 291 (K) NRWDETPKTERDtPGHGSGWAETPR (T) NRWDET(0.0)PKT(0.0)ERDT(0.99)PGHGS(0.0)GWAET(0.0)PR K:TMT10,t:Phosphorylated T SF3B1 146569.5 3 20 53.1 735.77 HUMAN 1 7.4933 -0.4713 TPKTGMGSGSAGKEG-p Q86YS7-3;S321-p TPKTGMGSGSAGKEG 0.0717004271880835 0.00298089814036961 -0.508 -0.738333333333333 24.7103826227719 37.9800686988455 -0.508 -0.738333333333333 0.00338035053279372 0.000159218354090656 -4.97079760231797 -9.25891098587172 Q86YS7 C2CD5 Q86YS7.3.S321.p_C2CD5 Q86YS7-3_S321sS323s_2_2_321_323 Q86YS7-3 Q86YS7-3 Isoform 3 of C2 domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16089.16089.4 8.94 8.94 8.939 3 2 2 0 579.534 2155.1785 S321s S323s TMT10 317 (K) TGMGsGsAGKEGGPFK (A) T(0.0)GMGS(0.99)GS(0.99)AGKEGGPFK K:TMT10,s:Phosphorylated S C2CD5 117622.7 2 21 349.1 351.16 HUMAN 1 -24.7104 -37.9801 TPKTGSGSPFAGNSP-p Q9UPT8;S1269-p TPKTGSGSPFAGNSP 0.108078410418423 0.00418928233298265 0.408 0.643666666666667 20.330623764193 34.9876336811165 0.408 0.643666666666667 0.0092669671513924 0.000317129492017789 3.95026780454928 8.08966206135804 Q9UPT8 ZC3H4 Q9UPT8.S1269.p_ZC3H4 Q9UPT8_S1269s _1_1_1269_1269 Q9UPT8 Q9UPT8 Zinc finger CCCH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8020.8020.2 15.8 12.81 2.01 4 1 1 0 807.877 1534.7811 S1269s TMT10 1265 (K) TGSGsPFAGNSPAR (E) T(0.0)GS(0.0)GS(0.99)PFAGNS(0.0)PAR s:Phosphorylated S ZC3H4 140881.7 3 10 427.1 318.7 HUMAN 1 20.3306 34.9876 TPLALAGSPTPKNPE-p M0QXA7;S180-p TPLALAGSPTPKNPE 0.0846108990025632 0.00123467326444358 -0.598333333333333 -1.39033333333333 22.9550361360887 47.7644748265932 -0.598333333333334 -1.39033333333333 0.00506403135907159 1.67321795912764e-05 -4.54380597453977 -14.242609271714 M0QXA7 WIZ M0QXA7.S180.p_WIZ M0QXA7_S180s _1_1_180_180 M0QXA7 O95785|M0QXA7|O95785-3 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18071.18071.4 17.23 17.23 2.4 3 1 1 0 626.5992 2423.4113 S180s TMT10 173 (K) TPLALAGsPTPKNPEDK (S) T(0.0)PLALAGS(0.99)PT(0.0)PKNPEDK K:TMT10,s:Phosphorylated S WIZ 104190.1 14 3 195.1 461.51 HUMAN 1 -22.955 -47.7645 TPLDRCRSPGMLEPL-p Q9UQ35;S2132-p TPLDRCRSPGMLEPL 0.313268519533153 0.194735073510352 0.149333333333333 0.130333333333333 9.42634309084843 9.34182697250144 0.149333333333333 0.130333333333333 0.114121032150835 0.116363641256226 1.88219442771613 1.86685290320143 Q9UQ35 SRRM2 Q9UQ35.S2132.p_SRRM2 Q9UQ35_S2132s _1_1_2132_2132 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10468.10468.3 20.22 16.63 20.224 3 1 1 0 542.9084 1546.7465 S2132s Hydrogen 2130 (R) CRsPGMLEPLGSSR (T) CRS(0.99)PGMLEPLGS(0.0)S(0.0)R C:Carbamidomethylation,s:Phosphorylated S SRRM2 300351.7 26 136 2.1 3310.34 HUMAN 1 9.4263 9.3418 TPLFQVISPQRIPAT-p Q8IZD4;S511-p TPLFQVISPQRIPAT 0.744227311761118 0.471000085835072 -0.0713333333333333 0.104333333333333 2.43554796887043 4.35862458954277 -0.0713333333333334 0.104333333333333 0.57074905765425 0.366553643792213 -0.603233980224178 0.984911780979923 Q8IZD4 DCP1B Q8IZD4.S511.p_DCP1B Q8IZD4_S511s _1_1_511_511 Q8IZD4 Q8IZD4|Q8IZD4-2 mRNA-decapping enzyme 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.37249.37249.5 24.79 18.91 2.782 9 1 1 0 1031.7485 5074.7514 S511s TMT10 497 (K) TPNTEQQTPLFQVIsPQRIPATAAPSLLMSPMVFAQPTSVPPK (E) T(0.0)PNT(0.0)EQQT(0.0)PLFQVIS(0.99)PQRIPAT(0.0)AAPS(0.0)LLMS(0.0)PMVFAQPT(0.0)S(0.0)VPPK K:TMT10,s:Phosphorylated S DCP1B 68121.1 2 10 577.1 267.77 HUMAN 1 -2.4355 4.3586 TPLHRDKTPLHQKHA-p P10244;T494-p TPLHRDKTPLHQKHA 0.134264480831341 0.00184315572268208 0.389 -1.15966666666667 17.9356164445219 43.0042414644379 0.389 -1.15966666666667 0.0160856403953569 5.00697996437589e-05 3.44924702462944 -11.568798726295 P10244 MYBL2 P10244.T494.p_MYBL2 P10244_T494t _1_1_494_494 P10244 P10244|P10244-2 Myb-related protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.4861.4861.3 11.21 11.68 99 1 1 1 0 502.2817 1424.8626 T494t Hydrogen 492 (R) DKtPLHQK (H) DKT(1.0)PLHQK K:TMT10-Lys-Only,t:Phosphorylated T MYBL2 79390.3 2 10 752.1 231.53 HUMAN 1 17.9356 -43.0042 TPLIGRESPPPSYTS-p Q9C0H2;S496-p TPLIGRESPPPSYTS 0.610247631511631 0.752400094712724 0.071 -0.0436666666666667 3.97372044018862 1.70692089851264 0.071 -0.0436666666666666 0.400523456988001 0.675006430435739 0.912102915615137 -0.442824072570027 Q9C0H2 TTYH3 Q9C0H2.S496.p_TTYH3 Q9C0H2_S496s _1_1_496_496 Q9C0H2 Q9C0H2|Q9C0H2-2|Q9C0H2-3 Protein tweety homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14614.14614.3 15.39 9.35 2.591 7 1 1 0 896.746 2608.2697 S496s TMT10 486 (R) CENTPLIGREsPPPSYTSSMR (A) CENT(0.0)PLIGRES(0.99)PPPS(0.0)Y(0.0)T(0.0)S(0.0)S(0.0)MR C:Carbamidomethylation,s:Phosphorylated S TTYH3 58513.6 3 2 3807.1 42.68 HUMAN 1 3.9737 -1.7069 TPLKVKRSPDEALPG-p Q5JSZ5;S1470-p TPLKVKRSPDEALPG 0.326712709573282 0.184388752201514 0.148 -0.152 9.09365295388726 9.65382796345445 0.148 -0.152 0.123206807559045 0.108297193883422 1.82457601198729 -1.92087952055404 Q5JSZ5 PRRC2B Q5JSZ5.S1470.p_PRRC2B Q5JSZ5_S1470s _1_1_1470_1470 Q5JSZ5 Q5JSZ5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13735.13735.4 14.23 14.23 4.057 7 1 1 0 878.1887 3429.7585 S1470s TMT10 1467 (K) VKRsPDEALPGGLSGCSSGSGHSPYALER (A) VKRS(0.99)PDEALPGGLS(0.0)GCS(0.0)S(0.0)GS(0.0)GHS(0.0)PY(0.0)ALER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PRRC2B 244103.4 2 76 36.2 882.05 HUMAN 1 9.0937 -9.6538 TPLPEDCSPTHSPRV-p Q12802-2;S2402-p TPLPEDCSPTHSPRV 0.259441883712572 0.0414047860758478 0.265 -0.306 11.1247841074696 18.5402216712645 0.265 -0.306 0.0771829883137852 0.0139951588708659 2.17798500161381 -3.56939952192262 Q12802 AKAP13 Q12802.2.S2402.p_AKAP13 Q12802-2_S2402s _1_1_2402_2402 Q12802-2 Q12802-2|Q12802-4|A8MYJ1|A0A087WTD7 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19683.19683.4 15.97 15.97 1.27 5 1 1 0 818.8586 3192.442 S2402s TMT10 2384 (K) EMIFRDMAECSTPLPEDCsPTHSPR (V) EMIFRDMAECS(0.0)T(0.0)PLPEDCS(0.99)PT(0.0)HS(0.0)PR C:Carbamidomethylation,s:Phosphorylated S AKAP13 310921 3 21 66.1 683.25 HUMAN 1 11.1248 -18.5402 TPLPEDNSMNVDQDG-p P78527;S3205-p TPLPEDNSMNVDQDG 0.456329906764675 0.0292247151639829 0.108 0.322666666666667 6.28396536942453 20.7682922562054 0.108 0.322666666666667 0.235289996385164 0.00837858682278405 1.33499605068371 4.04183979511758 P78527 PRKDC P78527.S3205.p_PRKDC P78527_S3205s _1_1_3205_3205 P78527 P78527|P78527-2 DNA-dependent protein kinase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29294.29294.4 23.07 22.05 6.825 5 1 1 0 1103.5031 4331.0129 S3205s TMT10 3197 (K) LTPLPEDNsMNVDQDGDPSDRMEVQEQEEDISSLIR (S) LT(0.0)PLPEDNS(0.99)MNVDQDGDPS(0.0)DRMEVQEQEEDIS(0.0)S(0.0)LIR s:Phosphorylated S PRKDC 474044.1 17 13 362.1 342.68 HUMAN 1 6.284 20.7683 TPLPRSWSPKDKYNY-p R4GMX8;S58-p TPLPRSWSPKDKYNY 0.615512370517762 0.0145497038675128 0.084 -0.520333333333333 3.91030937751597 25.4486063614108 0.084 -0.520333333333333 0.406414376472031 0.00285193329793106 0.899945897540241 -5.15171874890977 R4GMX8 RANBP10 R4GMX8.S58.p_RANBP10 R4GMX8_S58s _1_1_58_58 R4GMX8 Q96S59|R4GMX8|Q6VN20|A0A0D9SEU5|Q6VN20-3 Ran-binding protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11207.11207.3 8.69 2.65 2.108 2 1 1 0 538.9658 1534.9196 S58s TMT10 56 (R) SWsPKDK (Y) S(0.0)WS(0.99)PKDK K:TMT10,s:Phosphorylated S RANBP10 71282.8 1 7 1268.1 160.1 HUMAN 1 3.9103 -25.4486 TPLPSLASPAVPAPG-p Q8NCD3;S185-p TPLPSLASPAVPAPG 0.437473412421193 0.604511211545118 -0.119666666666667 0.0683333333333333 6.61417686628056 2.96602403213786 -0.119666666666667 0.0683333333333333 0.218063166086613 0.505123526753172 -1.39329308984459 0.713403429013656 Q8NCD3 HJURP Q8NCD3.S185.p_HJURP Q8NCD3_S185s _1_1_185_185 Q8NCD3 Q8NCD3|Q8NCD3-2|Q8NCD3-3 Holliday junction recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25877.25877.3 15.27 15.27 4.285 5 1 1 0 783.7356 2269.2212 S185s TMT10 177 (R) VTPLPSLAsPAVPAPGYCSR (I) VT(0.0)PLPS(0.0)LAS(0.99)PAVPAPGY(0.0)CS(0.0)R C:Carbamidomethylation,s:Phosphorylated S HJURP 84336.4 1 3 596.1 263.83 HUMAN 1 -6.6142 2.966 TPLRGPPSPRVAPSP-p A5PKW4;S75-p TPLRGPPSPRVAPSP 0.51636083436218 0.301395500653222 0.099 0.109 5.29925812046678 6.87523724199244 0.099 0.109 0.295171340731571 0.205341285163506 1.15862687073934 1.43876557264819 A5PKW4 PSD A5PKW4.S75.p_PSD A5PKW4_S75s _1_1_75_75 A5PKW4 A5PKW4 PH and SEC7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12765.12765.3 13.92 9.96 5.676 3 1 1 0 639.0006 1835.0159 S75s TMT10 63 (R) VTAPCTPLRGPPsPR (V) VT(0.0)APCT(0.0)PLRGPPS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S PSD 110168.4 1 1 5365.1 20.06 HUMAN 1 5.2993 6.8752 TPLTLEISPDNSLRR-p Q9UPQ7;S774-p TPLTLEISPDNSLRR 0.906395416103857 0.757335400309042 -0.0186666666666667 -0.041 0.838831497393605 1.66852967853897 -0.0186666666666667 -0.041 0.824359885525743 0.680999874921031 -0.232947619584101 -0.434029107696628 Q9UPQ7 PDZRN3 Q9UPQ7.S774.p_PDZRN3 Q9UPQ7_S774s _1_1_774_774 Q9UPQ7 Q9UPQ7 E3 ubiquitin-protein ligase PDZRN3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24034.24034.3 12.8 12.8 4.478 5 1 1 0 651.3381 1872.0276 S774s TMT10 766 (R) STPLTLEIsPDNSLR (R) S(0.0)T(0.0)PLT(0.0)LEIS(0.99)PDNS(0.0)LR s:Phosphorylated S PDZRN3 121191.8 1 1 4772.1 26.87 HUMAN 1 -0.8388 -1.6685 TPMKKHLSLPAGQVV-p Q8IXS8;S430-p TPMKKHLSLPAGQVV 0.37027673510532 0.110065239391534 -0.128333333333333 -0.192666666666667 8.00101421646752 12.656626247688 -0.128333333333333 -0.192666666666667 0.158452311244304 0.0542422099343636 -1.63533654997042 -2.4480720246771 Q8IXS8 FAM126B Q8IXS8.S430.p_FAM126B Q8IXS8_S430s _1_1_430_430 Q8IXS8 Q8IXS8 Protein FAM126B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19471.19471.3 18.66 18.66 99 1 1 1 0 595.3475 1704.0572 S430s TMT10 428 (K) HLsLPAGQVVPK (I) HLS(1.0)LPAGQVVPK K:TMT10,s:Phosphorylated S FAM126B 59101.9 6 7 955.1 195.77 HUMAN 1 -8.001 -12.6566 TPMQKSVSPLVWCRQ-p Q9P270;S147-p TPMQKSVSPLVWCRQ 0.292579056536687 0.023345939998049 -0.156333333333333 -0.374 10.068666559502 22.2667241953285 -0.156333333333333 -0.374 0.0984313279002628 0.00593372726132857 -1.99364275956308 -4.37848761982492 Q9P270 SLAIN2 Q9P270.S147.p_SLAIN2 Q9P270_S147s _1_1_147_147 Q9P270 Q9P270 SLAIN motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20796.20796.2 13.94 8 2.835 2 1 1 0 706.8521 1332.7296 S147s TMT10 145 (K) SVsPLVWCR (Q) S(0.0)VS(0.99)PLVWCR C:Carbamidomethylation,s:Phosphorylated S SLAIN2 62770.5 2 7 277.1 389.63 HUMAN 1 -10.0687 -22.2667 TPNKIAISPLKSPNK-p Q6MZP7;S310-p TPNKIAISPLKSPNK 0.53616137253053 0.00298393706599723 0.142 -0.784 5.01039960394738 37.9467552551454 0.142 -0.784 0.31547143377842 0.000160444367118039 1.10596355248234 -9.24510940256907 Q6MZP7 LIN54 Q6MZP7.S310.p_LIN54 Q6MZP7_S310s _1_1_310_310 Q6MZP7 Q6MZP7|Q6MZP7-3 Protein lin-54 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19382.19382.4 13.09 13.09 3.905 2 1 1 0 484.5473 1855.1984 S310s TMT10 307 (K) IAIsPLKSPNK (A) IAIS(0.99)PLKS(0.0)PNK K:TMT10,s:Phosphorylated S LIN54 80862.1 5 6 2171.1 94.63 HUMAN 1 5.0104 -37.9468 TPNLKRLSNLPGYLQ-p Q6ZN28;S515-p TPNLKRLSNLPGYLQ 0.0395731079578075 0.0111226865687467 -0.627333333333333 -0.694333333333333 31.3917425128991 27.3628280655011 -0.627333333333334 -0.694333333333333 0.000725814681525212 0.00183534280432314 -6.86699706900133 -5.66024250967307 Q6ZN28 MACC1 Q6ZN28.S515.p_MACC1 Q6ZN28_S515s _1_1_515_515 Q6ZN28 Q6ZN28 Metastasis-associated in colon cancer protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20605.20605.3 11.98 9.81 8.106 2 1 1 0 609.6824 1747.0631 S515s TMT10 513 (K) RLsNLPGYLQK (K) RLS(0.99)NLPGY(0.0)LQK K:TMT10,s:Phosphorylated S MACC1 97436.1 1 9 744.1 233.51 HUMAN 1 -31.3917 -27.3628 TPNLVKHSPSEDKMS-p Q96CJ1;S144-p TPNLVKHSPSEDKMS 0.119225204869155 0.0474821449726032 -0.485666666666667 -0.259333333333333 19.2150470286545 17.7026276500005 -0.485666666666667 -0.259333333333333 0.0119810614913037 0.0169721645998456 -3.71247927377187 -3.3996055578277 Q96CJ1 EAF2 Q96CJ1.S144.p_EAF2 Q96CJ1_S144s _1_1_144_144 Q96CJ1 B4DWJ3|Q96CJ1 ELL-associated factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9822.9822.4 15.81 15.81 4.212 3 1 1 0 555.5559 2139.2377 S144s TMT10 137 (R) TPNLVKHsPSEDK (M) T(0.0)PNLVKHS(0.99)PS(0.0)EDK K:TMT10,s:Phosphorylated S EAF2 29133.4 1 1 2357.2 86.81 HUMAN 1 -19.215 -17.7026 TPNNRAVTPVSQGSN-p O00512;T315-p TPNNRAVTPVSQGSN 0.942826815725603 0.039373381031953 0.014 0.296666666666667 0.504086663759311 18.8483821326644 0.014 0.296666666666667 0.89041267517095 0.0130365233463822 0.144396946880716 3.63289085665753 O00512 BCL9 O00512.T315.p_BCL9 O00512_T315t _1_1_315_315 O00512 O00512 B-cell CLL/lymphoma 9 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16538.16538.5 31.24 25.19 1.639 10 1 1 0 1114.548 5488.7621 T315t TMT10 313 (R) AVtPVSQGSNSSSADPKAPPPPPVSSGEPPTLGENPDGLSQEQLEHRER (S) AVT(0.99)PVS(0.0)QGS(0.0)NS(0.0)S(0.0)S(0.0)ADPKAPPPPPVS(0.0)S(0.0)GEPPT(0.0)LGENPDGLS(0.0)QEQLEHRER K:TMT10,t:Phosphorylated T BCL9 149515.8 8 9 313.1 369.9 HUMAN 1 0.5041 18.8484 TPNNVVSTPAPSPDA-p Q8WWI1-3;T622-p TPNNVVSTPAPSPDA 0.140760843773736 0.12173457113225 0.254666666666667 0.195333333333333 17.4207512131694 12.0622951149522 0.254666666666667 0.195333333333333 0.0181102680637885 0.0621971505177341 3.34597036438782 2.34221306589461 Q8WWI1 LMO7 Q8WWI1.3.T622.p_LMO7 Q8WWI1-3_T622tS626s_2_2_622_626 Q8WWI1-3 E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22842.22842.4 18.29 14.86 1.11 9 2 2 0 801.1439 3041.6155 T622t S626s TMT10 615 (R) TPNNVVStPAPsPDASQLASSLSSQK (E) T(0.0)PNNVVS(0.0)T(0.99)PAPS(0.99)PDAS(0.0)QLAS(0.0)S(0.0)LS(0.0)S(0.0)QK K:TMT10,t:Phosphorylated T,s:Phosphorylated S LMO7 154694.3 2 35 61.1 704.74 HUMAN 1 17.4208 12.0623 TPPAAAVSPMQRHSI-p Q69YQ0;S881-p TPPAAAVSPMQRHSI 0.682078728827876 0.900932675319687 0.0573333333333333 -0.0126666666666667 3.11487922666905 0.633912711699407 0.0573333333333333 -0.0126666666666667 0.488103674776471 0.864188989697593 0.743650521830351 -0.179330929979423 Q69YQ0 SPECC1L Q69YQ0.S881.p_SPECC1L Q69YQ0_S881s _1_1_881_881 Q69YQ0 Q69YQ0|Q69YQ0-2 Cytospin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10577.10577.3 11.56 11.56 9.025 2 1 1 0 512.2603 1454.7987 S881s TMT10 874 (K) TPPAAAVsPMQR (H) T(0.0)PPAAAVS(0.99)PMQR s:Phosphorylated S SPECC1L 124999.2 2 8 1013.1 188.73 HUMAN 1 3.1149 -0.6339 TPPGAKASNPFLPGG-p Q9Y6I3-1;S587-p TPPGAKASNPFLPGG 0.148266672319898 0.296010605984698 0.292666666666667 0.113333333333333 16.8093887907916 6.97960800978048 0.292666666666667 0.113333333333333 0.0208478426690323 0.200465295733863 3.22518596568142 1.45704185738985 Q9Y6I3 EPN1 Q9Y6I3.1.S587.p_EPN1 Q9Y6I3-1_S587s _1_1_587_587 Q9Y6I3-1 Q9Y6I3-1|Q9Y6I3-3 Isoform 2 of Epsin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34788.34788.4 18 13.73 4.032 6 1 1 0 949.4874 3714.9805 S587s TMT10 586 (K) AsNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLR (L) AS(0.99)NPFLPGGGPAT(0.0)GPS(0.0)VT(0.0)NPFQPAPPAT(0.0)LT(0.0)LNQLR s:Phosphorylated S EPN1 69266.5 3 8 856.1 210.87 HUMAN 1 16.8094 6.9796 TPPGPCCSPGVGWAQ-p Q2VPK5;S435-p TPPGPCCSPGVGWAQ 0.299702423811655 0.882761057295861 0.240666666666667 0.0186666666666667 9.83775218385583 0.760823587984568 0.240666666666667 0.0186666666666667 0.103806555751935 0.839300807981241 1.95353577440528 0.212738088131035 Q2VPK5 CTU2 Q2VPK5.S435.p_CTU2 Q2VPK5_S435s _1_1_435_435 Q2VPK5 Q2VPK5|Q2VPK5-5|Q2VPK5-3 Cytoplasmic tRNA 2-thiolation protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14573.14573.3 12.85 12.03 12.853 2 1 1 0 679.3079 1955.9418 S435s TMT10 428 (R) TPPGPCCsPGVGWAQR (C) T(0.0)PPGPCCS(0.99)PGVGWAQR C:Carbamidomethylation,s:Phosphorylated S CTU2 57247.3 1 3 3167.1 58.81 HUMAN 1 9.8378 0.7608 TPPLPKGTPPLTPSD-p Q6NZY4;T492-p TPPLPKGTPPLTPSD 0.0635108641161859 0.00529828536418586 0.399333333333333 0.532666666666667 25.999658131681 33.0649924550713 0.399333333333333 0.532666666666667 0.00251208417019326 0.00049374277602038 5.30149699626679 7.40829330897687 Q6NZY4 ZCCHC8 Q6NZY4.T492.p_ZCCHC8 Q6NZY4_T492t _1_1_492_492 Q6NZY4 Q6NZY4|Q6NZY4-2 Zinc finger CCHC domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24524.24524.5 12.28 12.28 1.183 7 1 1 0 664.9605 3240.8033 T492t TMT10 478 (R) GTPPPVFTPPLPKGtPPLTPSDSPQTR (T) GT(0.0)PPPVFT(0.0)PPLPKGT(0.99)PPLT(0.0)PS(0.0)DS(0.0)PQT(0.0)R K:TMT10,t:Phosphorylated T ZCCHC8 79203.5 4 7 443.1 311.3 HUMAN 1 25.9997 33.065 TPPLPRGTPPPVFTP-p Q6NZY4;T479-p TPPLPRGTPPPVFTP 0.12656840713573 0.934939435492451 0.294 0.015 18.6503314490066 0.412377597561992 0.294 0.015 0.0136447899700503 0.909415265960508 3.59509661603342 0.11919159292136 Q6NZY4 ZCCHC8 Q6NZY4.T479.p_ZCCHC8 Q6NZY4_T479t _1_1_479_479 Q6NZY4 Q6NZY4|Q6NZY4-2 Zinc finger CCHC domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24163.24163.2 16.87 16.87 7.47 2 1 1 0 828.95 1576.93 T479t Hydrogen 478 (R) GtPPPVFTPPLPK (G) GT(0.99)PPPVFT(0.0)PPLPK K:TMT10-Lys-Only,t:Phosphorylated T ZCCHC8 79203.5 3 5 443.1 311.3 HUMAN 1 18.6503 0.4124 TPPNEAVSVVINAEL-p Q9NR09;S1717-p TPPNEAVSVVINAEL 0.980699778242646 0.834407189478569 0.00566666666666666 -0.0206666666666666 0.168074233956986 1.1023561250574 0.00566666666666667 -0.0206666666666667 0.96203877491663 0.775826102931049 0.0498388181153394 -0.299330016340759 Q9NR09 BIRC6 Q9NR09.S1717.p_BIRC6 Q9NR09_S1717s_1_1_1717_1717 Q9NR09 Q9NR09 Baculoviral IAP repeat-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.37362.37362.5 22.27 22.27 1.302 6 1 1 0 1070.1709 5249.8689 M1705m S1717s N1721n TMT10 1700 (K) TTPLFmTPPLTPPNEAVsVVInAELAQLFPGSVIDPPAVNLAAHNK (N) T(0.0)T(0.0)PLFM(1.0)T(0.0)PPLT(0.0)PPN(0.0)EAVS(0.99)VVIN(0.99)AELAQLFPGS(0.0)VIDPPAVN(0.0)LAAHN(0.0)K K:TMT10,m:Oxidized methionine,s:Phosphorylated S,n:Deamidated BIRC6 536521.4 4 5 1201.1 166.97 HUMAN 1 0.1681 -1.1024 TPPNGNLSPAPRLRR-p P48634;S1004-p TPPNGNLSPAPRLRR 0.337603610474496 0.020766442681197 -0.145333333333333 -0.342666666666667 8.78193641700257 23.0182160115814 -0.145333333333333 -0.342666666666667 0.132375117406008 0.00499089460584762 -1.77061580357698 -4.55362974227795 P48634 PRRC2A P48634.S1004.p_PRRC2A P48634_S1004s_1_1_1004_1004 P48634 P48634|P48634-3|P48634-2 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14144.14144.3 15.91 15.91 2.862 2 1 1 0 781.0823 2260.2814 N1000n S1004s TMT10 991 (K) LGGPKETPPnGNLsPAPR (L) LGGPKET(0.0)PPN(0.99)GN(0.0)LS(0.99)PAPR K:TMT10,n:Deamidated,s:Phosphorylated S PRRC2A 229315.4 6 16 36.1 882.05 HUMAN 1 -8.7819 -23.0182 TPPPPPPSPERVGIS-p Q96HE9;S40-p TPPPPPPSPERVGIS 0.950466896477293 0.141739706695822 -0.0103333333333333 -0.25 0.434872657802628 11.1795343744215 -0.0103333333333333 -0.25 0.904716965120369 0.0762160720136294 -0.12542276344325 -2.18658811280851 Q96HE9 PRR11 Q96HE9.S40.p_PRR11 Q96HE9_S40s _1_1_40_40 Q96HE9 Q96HE9 Proline-rich protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25817.25817.5 18.01 18.01 1.168 6 1 1 0 590.7183 2869.5985 S40s TMT10 31 (K) LITPPPPPPsPERVGISSIDISQSR (S) LIT(0.0)PPPPPPS(0.99)PERVGIS(0.0)S(0.0)IDIS(0.0)QS(0.0)R s:Phosphorylated S PRR11 40597.8 9 1 1094.1 178.6 HUMAN 1 -0.4349 -11.1795 TPPPPTLSPAAITVG-p Q8NDX5-7;S628-p TPPPPTLSPAAITVG 0.744043857023488 0.145972593594168 0.046 0.184666666666667 2.43768232583217 11.0089056921806 0.046 0.184666666666667 0.570468629745488 0.0792701045123185 0.603687408770615 2.15669639367704 Q8NDX5 PHC3 Q8NDX5.7.S628.p_PHC3 Q8NDX5-7_T621tS628s_2_2_621_628 Q8NDX5-7 Q8NDX5-7|Q8NDX5-2|E7EX82 Isoform 7 of Polyhomeotic-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20535.20535.4 14.89 14.89 1.856 4 2 2 0 592.2947 2206.2215 T621t S628s TMT10 618 (R) MDRtPPPPTLsPAAITVGR (G) MDRT(0.99)PPPPT(0.0)LS(0.99)PAAIT(0.0)VGR t:Phosphorylated T,s:Phosphorylated S PHC3 108276.8 9 18 439.1 312.22 HUMAN 1 2.4377 11.0089 TPPPRRRSAPPELGI-p Q96L33;S25-p TPPPRRRSAPPELGI 0.0658438295661245 0.00991769079995784 -0.397666666666667 -0.435 25.5123510059782 28.1756578361068 -0.397666666666667 -0.435 0.00281037905038117 0.00152206856409896 -5.17472094327686 -5.88711011899987 Q96L33 RHOV Q96L33.S25.p_RHOV Q96L33_S25s _1_1_25_25 Q96L33 Q96L33 Rho-related GTP-binding protein RhoV HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14723.14723.2 16.41 16.41 99 1 1 1 0 610.829 1140.6826 S25s Hydrogen 25 (R) sAPPELGIK (C) S(1.0)APPELGIK K:TMT10-Lys-Only,s:Phosphorylated S RHOV 26730.2 4 2 4233.1 35.02 HUMAN 1 -25.5124 -28.1757 TPPPRRRTPSPPPRR-p A9Z1X7;T590-p TPPPRRRTPSPPPRR 0.168729110694674 0.158441376662528 0.353333333333333 0.414333333333333 15.4187135994966 10.5240319911235 0.353333333333333 0.414333333333333 0.0287163104656702 0.0886332758374342 2.95735639300405 2.0720303814716 A9Z1X7 NotFound A9Z1X7.T590.p_NotFound A9Z1X7_T590tS592s_2_2_590_592 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.2259.2469.3 9.69 9.69 99 2 2 2 0 408.5196 1063.6119 T590t S592s Hydrogen 588 (R) RRtPsPPPR (R) RRT(1.0)PS(1.0)PPPR t:Phosphorylated T,s:Phosphorylated S SRRM1 103445.7 10 63 8.1 1346.57 HUMAN 1 15.4187 10.524 TPPPSTRSLNERAET-p Q8IX15-3;S446-p TPPPSTRSLNERAET 0.252651211577592 0.186805501714784 0.186333333333333 0.155333333333333 11.3923065671675 9.58374802617537 0.186333333333333 0.155333333333333 0.0725720420073286 0.110058907477473 2.22498651398769 1.90873898249245 Q8IX15 HOMEZ Q8IX15.3.S446.p_HOMEZ Q8IX15-3_S446s _1_1_446_446 Q8IX15-3 Q8IX15-3 Isoform 2 of Homeobox and leucine zipper protein Homez HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26669.26669.3 22.06 19.99 1.433 2 1 1 0 1028.2099 3002.6512 S446s TMT10 446 (R) sLNERAETPPLPIPPPPPDIQPLER (Y) S(0.99)LNERAET(0.0)PPLPIPPPPPDIQPLER s:Phosphorylated S HOMEZ 62093.3 12 4 1600.1 128.63 HUMAN 1 11.3923 9.5837 TPPQVLDSPHQRSPS-p Q969H4;S300-p TPPQVLDSPHQRSPS 0.931437927803202 0.0514610185239339 -0.0193333333333334 0.230666666666667 0.611747614611849 17.1984483784258 -0.0193333333333334 0.230666666666667 0.868610827230258 0.0190614161129596 -0.173437674616409 3.2992728813125 Q969H4 CNKSR1 Q969H4.S300.p_CNKSR1 Q969H4_S300s _1_1_300_300 Q969H4 Q969H4|Q969H4-2|G3V160 Connector enhancer of kinase suppressor of ras 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19424.19424.5 21.67 21.67 4.541 3 1 1 0 603.5319 2933.6613 S300s TMT10 283 (K) KIPIPETPPQTPPQVLDsPHQR (S) KIPIPET(0.0)PPQT(0.0)PPQVLDS(0.99)PHQR K:TMT10,s:Phosphorylated S CNKSR1 80560.2 2 3 1912.1 107.86 HUMAN 1 -0.6117 17.1984 TPPRRAPSPDGFSPY-p Q13233;S292-p TPPRRAPSPDGFSPY 0.306986126472047 0.0776032157263054 -0.152333333333333 -0.197333333333333 9.59026434270878 14.7248840107824 -0.152333333333333 -0.197333333333333 0.109893894810614 0.0336908213598909 -1.91060466507378 -2.82520819946047 Q13233 MAP3K1 Q13233.S292.p_MAP3K1 Q13233_S292s _1_1_292_292 Q13233 Q13233 Mitogen-activated protein kinase kinase kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12711.12711.3 19.52 19.52 2.393 5 1 1 0 772.6868 2236.0832 S292s TMT10 289 (R) RAPsPDGFSPYSPEETNR (R) RAPS(0.99)PDGFS(0.0)PY(0.0)S(0.0)PEET(0.0)NR s:Phosphorylated S MAP3K1 166521 5 8 505.1 289.91 HUMAN 1 -9.5903 -14.7249 TPPRRSRSGSSQPKA-p Q9UQ35;S799-p TPPRRSRSGSSQPKA 0.807840650085328 0.673056205652556 -0.0543333333333333 -0.109 1.77983153704997 2.35226958833011 -0.0543333333333333 -0.109 0.663768817513389 0.581799094744236 -0.459472611105332 -0.585402217257113 Q9UQ35 SRRM2 Q9UQ35.S799.p_SRRM2 Q9UQ35_S799s _1_1_799_799 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4251.4251.2 8.37 1.55 2.1 3 1 1 0 614.8212 1148.6676 S799s TMT10 799 (R) sGSSQPK (A) S(0.99)GS(0.0)S(0.0)QPK K:TMT10,s:Phosphorylated S SRRM2 300351.7 1 25 2.1 3310.34 HUMAN 1 -1.7798 -2.3523 TPPRRVQTPLLRATV-p Q9UHD8;T49-p TPPRRVQTPLLRATV 0.761476943047114 0.0792603482411338 0.046 -0.246333333333333 2.2667514927665 14.6103990480833 0.046 -0.246333333333333 0.593368996519669 0.0345907592917615 0.567097949671725 -2.80392387036379 Q9UHD8 SEPT9 Q9UHD8.T49.p_SEPT9 Q9UHD8_T49t _1_1_49_49 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2|Q9UHD8-7 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9748.9748.3 10.93 10.93 99 1 1 1 0 431.2534 1211.7786 T49t TMT10 46 (R) RVQtPLLR (A) RVQT(1.0)PLLR t:Phosphorylated T SEPT9 65685.6 7 6 110.1 572.91 HUMAN 1 2.2668 -14.6104 TPPSTALSPGKMSEA-p Q01196-8;S48-p TPPSTALSPGKMSEA 0.0982861688091806 0.00775433628140887 -0.566 -0.564 21.3281489919399 30.1233609880864 -0.566 -0.564 0.00736520943461752 0.000971994709709248 -4.16996175222638 -6.45945028655483 Q01196 RUNX1 Q01196.8.S48.p_RUNX1 Q01196-8_S48s _1_1_48_48 Q01196-8 Q01196-8|Q01196-2|Q01196-10|Q01196-9|H9KVB1|Q01196-4|Q01196-3|Q01196-7|Q01196-5|Q01196-6 Isoform AML-1G of Runt-related transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.31556.31556.5 20.25 20.25 1.105 5 1 1 0 739.0038 3611.0122 S48s TMT10 40 (R) FTPPSTALsPGKMSEALPLGAPDAGAALAGK (L) FT(0.0)PPS(0.0)T(0.0)ALS(0.99)PGKMS(0.0)EALPLGAPDAGAALAGK K:TMT10,s:Phosphorylated S RUNX1 52102.5 9 2 1762.1 116.8 HUMAN 1 -21.3281 -30.1234 TPPTTPESPSSVTVT-p Q4LE39;S1029-p TPPTTPESPSSVTVT 0.512647526186485 0.112390636650417 0.102333333333333 0.214 5.36400968681642 12.5212916172053 0.102333333333333 0.214 0.290803099644663 0.0559591151061461 1.17036620480195 2.42388159279192 Q4LE39 ARID4B Q4LE39.S1029.p_ARID4B Q4LE39_S1029s_1_1_1029_1029 Q4LE39 Q4LE39|Q4LE39-2|Q4LE39-3|Q4LE39-4 AT-rich interactive domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18649.18649.5 23.88 23.88 1.103 13 1 1 0 778.1891 3805.9496 N1021n S1029s TMT10 1008 (R) KAEFPSSGSNSVLnTPPTTPEsPSSVTVTEGSR (Q) KAEFPS(0.0)S(0.0)GS(0.0)N(0.0)S(0.0)VLN(0.99)T(0.0)PPT(0.0)T(0.0)PES(0.99)PS(0.0)S(0.0)VT(0.0)VT(0.0)EGS(0.0)R K:TMT10,n:Deamidated,s:Phosphorylated S ARID4B 148890.9 8 13 191.1 463.89 HUMAN 1 5.364 12.5213 TPPVARTSPSGGTWS-p Q99700;S667-p TPPVARTSPSGGTWS 0.839353804661943 0.390354782508678 0.032 -0.0813333333333333 1.47040597805993 5.43210231019288 0.032 -0.0813333333333333 0.712786395809023 0.286279182902186 0.388040625178617 -1.18242997558155 Q99700 ATXN2 Q99700.S667.p_ATXN2 Q99700_S667s _1_1_667_667 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20621.20621.2 15.1 6.66 1.472 7 1 1 0 985.4821 1889.9919 S667s TMT10 666 (R) TsPSGGTWSSVVSGVPR (L) T(0.0)S(0.99)PS(0.0)GGT(0.0)WS(0.0)S(0.0)VVS(0.0)GVPR s:Phosphorylated S ATXN2 140907.9 6 9 176.1 481.52 HUMAN 1 1.4704 -5.4321 TPQCQHVSPGMLGSI-p Q6P0N0;S1042-p TPQCQHVSPGMLGSI 0.807190843839437 0.0113774963804547 0.0433333333333333 -0.578333333333333 1.79161668182432 27.2121983166636 0.0433333333333333 -0.578333333333333 0.661970036341965 0.00190011623349972 0.462143030044308 -5.61893828643737 Q6P0N0 MIS18BP1 Q6P0N0.S1042.p_MIS18BP1 Q6P0N0_S1042s _1_1_1042_1042 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13898.13898.4 18.94 15.01 4.448 3 1 1 0 763.8596 2972.4541 S1042s TMT10 1035 (K) TPQCQHVsPGMLGSINRNDCDK (Y) T(0.0)PQCQHVS(0.99)PGMLGS(0.0)INRNDCDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MIS18BP1 129996 5 34 54.1 728.39 HUMAN 1 1.7916 -27.2122 TPQEEADSDVGEEPD-p Q5JSP0;S128-p TPQEEADSDVGEEPD 0.725667788640017 0.00117984223282173 0.067 1.01366666666667 2.64056342806021 48.3966592380373 0.067 1.01366666666667 0.54443201686 1.44655208696462e-05 0.64641087109294 14.6389746268687 Q5JSP0 FGD3 Q5JSP0.S128.p_FGD3 Q5JSP0_S128s _1_1_128_128 Q5JSP0 Q5JSP0|Q5JSP0-3|Q5JSP0-2 FYVE, RhoGEF and PH domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11927.11927.4 25.97 25.97 8.205 4 1 1 0 896.4291 3502.7276 S128s TMT10 120 (K) VTPQEEADsDVGEEPDSENTPQKADK (D) VT(0.0)PQEEADS(0.99)DVGEEPDS(0.0)ENT(0.0)PQKADK K:TMT10,s:Phosphorylated S FGD3 80255.2 4 3 1834.1 112.05 HUMAN 1 2.6406 48.3967 TPQKAGSSDSCFSGT-p Q9H6A9;S298-p TPQKAGSSDSCFSGT 0.434470199873184 0.00260393841721574 -0.165333333333333 0.716333333333333 6.66918160109477 39.3656340369451 -0.165333333333333 0.716333333333334 0.215318745027032 0.000115727506639218 -1.40297164777849 9.84965863730018 Q9H6A9 PCNXL3 Q9H6A9.S298.p_PCNXL3 Q9H6A9_S297sS298s_2_2_297_298 Q9H6A9 Q9H6A9|Q9H6A9-2 Pecanex-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19467.19467.3 9.57 9.57 9.567 8 2 2 0 919.7321 2597.2554 S297s S298s TMT10 295 (K) AGssDSCFSGTDRETLSSFK (S) AGS(0.99)S(0.99)DS(0.0)CFS(0.0)GT(0.0)DRET(0.0)LS(0.0)S(0.0)FK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCNX3 224430.8 1 24 168.1 492.45 HUMAN 1 -6.6692 39.3656 TPQNVPASPGGDRSA-p Q2KHR2;S321-p TPQNVPASPGGDRSA 0.181080338359562 0.0117895344818076 -0.308 -0.606333333333333 14.6262245772387 26.9550289914809 -0.308 -0.606333333333333 0.034464941230719 0.00201603051253683 -2.80863880585808 -5.54894192033377 Q2KHR2 RFX7 Q2KHR2.S321.p_RFX7 Q2KHR2_S321s _1_1_321_321 Q2KHR2 Q2KHR2|Q2KHR2-2|H0YLX2 DNA-binding protein RFX7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6934.6934.2 12.31 12.24 7.08 2 1 1 0 802.8853 1524.7968 S321s TMT10 314 (K) TPQNVPAsPGGDR (S) T(0.0)PQNVPAS(0.99)PGGDR s:Phosphorylated S RFX7 147863 2 6 511.1 287.25 HUMAN 1 -14.6262 -26.955 TPQPAHHTPDTRTQA-p Q96K21;T243-p TPQPAHHTPDTRTQA 0.481005429235313 0.048558857768317 0.142666666666667 -0.286 5.84937680975126 17.5674879135625 0.142666666666667 -0.286 0.260053269946268 0.0175085914397061 1.25768446566748 -3.37257817491678 Q96K21 ZFYVE19 Q96K21.T243.p_ZFYVE19 Q96K21_T243t _1_1_243_243 Q96K21 Q96K21|Q96K21-2|H3BRF9|Q96K21-3|Q96K21-4 Abscission/NoCut checkpoint regulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7474.7474.3 17.43 17.43 1.722 4 1 1 0 731.0339 2111.1195 T243t TMT10 231 (R) VLPSQTPQPAHHtPDTR (T) VLPS(0.0)QT(0.0)PQPAHHT(0.99)PDT(0.0)R t:Phosphorylated T ZFYVE19 52458.3 2 3 971.1 193.47 HUMAN 1 5.8494 -17.5675 TPQPPPPSPPMKLEL-p Q9BWN1;S277-p TPQPPPPSPPMKLEL 0.151446699968719 0.0926322586461935 -0.282 -0.197 16.5088124686886 13.6658174166134 -0.282 -0.197 0.0223418305251744 0.0429950302002162 -3.1665075330331 -2.63023189387393 Q9BWN1 PRR14 Q9BWN1.S277.p_PRR14 Q9BWN1_S277s _1_1_277_277 Q9BWN1 Q9BWN1 Proline-rich protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30953.30953.5 17.46 15.2 5.178 5 1 1 0 793.0413 3881.2057 S277s TMT10 255 (R) SKLESFADIFLTPNKTPQPPPPsPPMK (L) S(0.0)KLES(0.0)FADIFLT(0.0)PNKT(0.0)PQPPPPS(0.99)PPMK K:TMT10,s:Phosphorylated S PRR14 64726.7 6 6 874.1 209.43 HUMAN 1 -16.5088 -13.6658 TPQPRSISGPSVGVM-p Q8NFH5;S55-p TPQPRSISGPSVGVM 0.730204449410447 0.0727112126621179 -0.0473333333333333 0.2 2.59043464725699 15.1292299099903 -0.0473333333333334 0.2 0.55075257365237 0.0306956623493918 -0.635922434352788 2.90081073631799 Q8NFH5 NUP35 Q8NFH5.S55.p_NUP35 Q8NFH5_S55s _1_1_55_55 Q8NFH5 Q8NFH5|Q8NFH5-2|F8WEL4|F8WCF5 Nucleoporin NUP53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19976.19976.2 14.16 14.16 2.285 3 1 1 0 829.8962 1578.8181 S55s TMT10 53 (R) SIsGPSVGVMEMR (S) S(0.0)IS(0.99)GPS(0.0)VGVMEMR s:Phosphorylated S NUP35 34887.3 2 4 627.1 257.69 HUMAN 1 -2.5904 15.1292 TPQQQEKSPVNTKSL-p P78527;S1052-p TPQQQEKSPVNTKSL 0.759357936811367 0.0159687474040441 -0.0773333333333333 0.440333333333333 2.29043192277446 24.8258425745679 -0.0773333333333334 0.440333333333333 0.590142385294837 0.00329166585540709 -0.572201123278113 4.99362670446297 P78527 PRKDC P78527.S1052.p_PRKDC P78527_S1052s _1_1_1052_1052 P78527 P78527|P78527-2 DNA-dependent protein kinase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9744.9744.4 8.99 8.99 3.613 3 1 1 0 624.0977 2413.4018 S1052s TMT10 1043 (K) QITPQQQEKsPVNTK (S) QIT(0.0)PQQQEKS(0.99)PVNT(0.0)K K:TMT10,s:Phosphorylated S PRKDC 474044.1 1 6 362.1 342.68 HUMAN 1 -2.2904 24.8258 TPQQTSASQQMLNFP-p Q8TAQ2;S555-p TPQQTSASQQMLNFP 0.945731226553801 0.437282038241336 0.0103333333333333 -0.0863333333333333 0.476458461482779 4.78616012552404 0.0103333333333333 -0.0863333333333333 0.896095205884859 0.332188036375103 0.136852351011937 -1.06451365762964 Q8TAQ2 SMARCC2 Q8TAQ2.S555.p_SMARCC2 Q8TAQ2_S555s _1_1_555_555 Q8TAQ2 Q8TAQ2 SWI/SNF complex subunit SMARCC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20348.20348.3 13.68 11.9 2.355 4 1 1 0 820.4075 2379.2379 S555s TMT10 548 (K) TPQQTSAsQQMLNFPDK (G) T(0.0)PQQT(0.0)S(0.0)AS(0.99)QQMLNFPDK K:TMT10,s:Phosphorylated S SMARCC2 133276.4 1 8 499.1 292.05 HUMAN 1 0.4765 -4.7862 TPRFSVPTPRTPRTP-p Q71F56;T1050-p TPRFSVPTPRTPRTP 0.409017991614316 0.0734147374597954 0.138666666666667 0.206333333333333 7.16011625321896 15.0605433260596 0.138666666666667 0.206333333333333 0.192304025171647 0.0311849941841996 1.48901264027605 2.88792002946151 Q71F56 MED13L Q71F56.T1050.p_MED13L Q71F56_T1050t _1_1_1050_1050 Q71F56 Q71F56 Mediator of RNA polymerase II transcription subunit 13-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.16148.16148.2 8.07 3.74 2.771 2 1 1 0 556.7897 1032.6039 T1050t TMT10 1046 (R) FSVPtPR (T) FS(0.0)VPT(0.99)PR t:Phosphorylated T MED13L 245507 2 15 415.1 321.44 HUMAN 1 7.1601 15.0605 TPRLAPPSPAREGTD-p O75145;S683-p TPRLAPPSPAREGTD 0.93306667659969 0.0191812095685332 -0.017 -0.393333333333333 0.591854580314618 23.6074661276851 -0.017 -0.393333333333333 0.87259866047919 0.00435766045339477 -0.168113708484271 -4.69408020011055 O75145 PPFIA3 O75145.S683.p_PPFIA3 O75145_S683s _1_1_683_683 O75145 O75145|O75145-2 Liprin-alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11097.11097.3 11.09 8.21 4.222 2 1 1 0 626.3369 1797.0271 S683s TMT10 679 (R) LAPPsPAREGTDK (A) LAPPS(0.99)PAREGT(0.0)DK K:TMT10,s:Phosphorylated S PPFIA3 134064.6 7 12 248.2 410.18 HUMAN 1 -0.5919 -23.6075 TPRMESHSEDEDLAG-p Q96MH2;S53-p TPRMESHSEDEDLAG 0.969977322086965 0.0811012265203804 0.00666666666666665 0.216 0.260512542882734 14.4660423230125 0.00666666666666666 0.213413149930035 0.941778443758232 0.0357598565282307 0.0764891305485799 2.7771602631546 Q96MH2 HEXIM2 Q96MH2.S53.p_HEXIM2 Q96MH2_S53s _1_1_53_53 Q96MH2 Q96MH2 Protein HEXIM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21579.21579.2 15.6 15.6 3.022 3 1 1 0 1313.5766 2546.1779 S53s TMT10 49 (R) MESHsEDEDLAGAVGGLGWNSR (S) MES(0.0)HS(0.99)EDEDLAGAVGGLGWNS(0.0)R s:Phosphorylated S HEXIM2 32760.3 4 10 1285.1 158.28 HUMAN 1 0.2605 14.466 TPRNLNRSLQKQTSY-p Q8NCN4;S417-p TPRNLNRSLQKQTSY 0.789347259104748 0.0846235976851816 0.043 -0.245666666666667 1.98189582399225 14.1985888810938 0.043 -0.245666666666667 0.633593068747111 0.0380312948342527 0.504788997889673 -2.72778857705872 Q8NCN4 RNF169 Q8NCN4.S417.p_RNF169 Q8NCN4_S417s _1_1_417_417 Q8NCN4 Q8NCN4 E3 ubiquitin-protein ligase RNF169 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8429.8429.3 10.09 10.09 99 1 1 1 0 504.2887 1430.8844 S417s TMT10 413 (R) NLNRsLQK (Q) NLNRS(1.0)LQK K:TMT10,s:Phosphorylated S RNF169 78277 1 8 729.1 236.14 HUMAN 1 1.9819 -14.1986 TPRPRSRSPSSPELN-p Q9UQ35;S1499-p TPRPRSRSPSSPELN 0.926957514861088 0.00883040673117586 0.018 0.574333333333333 0.650358954277566 29.1121059407075 0.018 0.574333333333333 0.860922592031436 0.00122684417694392 0.183718402495858 6.15708190901382 Q9UQ35 SRRM2 Q9UQ35.S1499.p_SRRM2 Q9UQ35_S1497sS1499s_2_2_1497_1499 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6967.6967.2 10.71 10.71 1.391 4 2 2 0 852.8818 1544.823 S1497s S1499s Hydrogen 1497 (R) sRsPSSPELNNK (C) S(0.99)RS(0.99)PS(0.0)S(0.0)PELNNK K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 9 212 2.1 3310.34 HUMAN 1 0.6504 29.1121 TPRQKRSTPLKERQL-p Q6VY07-2;T511-p TPRQKRSTPLKERQL 0.0740632396357817 0.0202062164760444 1.57033333333333 -1.851 24.2608827775085 23.207031310105 1.57033333333333 -1.851 0.00374896790341749 0.00477855808076811 4.85898403138155 -4.59833057123185 Q6VY07 PACS1 Q6VY07.2.T511.p_PACS1 Q6VY07-2_T511t _1_1_511_511 Q6VY07-2 Q6VY07-2|B4DF77 Isoform 2 of Phosphofurin acidic cluster sorting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4926.4926.4 7.02 4.35 1.424 2 1 1 0 432.0156 1645.0728 T511t TMT10 507 (R) QKRStPLK (E) QKRS(0.0)T(0.99)PLK K:TMT10,t:Phosphorylated T PACS1 109968.1 1 9 786.1 225.23 HUMAN 1 24.2609 -23.207 TPRRGGQSSRGGRGG-p Q9UMN6;S285-p TPRRGGQSSRGGRGG 0.435612446333817 0.0294769894638714 -0.231 0.346333333333333 6.64467124975118 20.7146038676817 -0.231 0.346333333333333 0.21653737865778 0.00848280753017898 -1.39865990015558 4.03007392915472 Q9UMN6 KMT2B Q9UMN6.S285.p_KMT2B Q9UMN6_S285s _1_1_285_285 Q9UMN6 Q9UMN6|Q9UMN6-2 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7814.7814.3 8.68 2.9 8.683 2 1 1 0 603.9811 1729.9592 S285s TMT10 281 (R) RGGQsSRGGRGGRGR (G) RGGQS(0.99)S(0.0)RGGRGGRGR s:Phosphorylated S KMT2B 297845.7 1 1 388.1 332.76 HUMAN 1 -6.6447 20.7146 TPRRINLTPLKTDTP-p Q13112;T503-p TPRRINLTPLKTDTP 0.066791213713894 0.00819640833915464 -0.500333333333333 -0.913333333333333 25.340548400749 29.6869733071096 -0.500333333333333 -0.913333333333334 0.00292378315691646 0.00107473815984714 -5.13054752602082 -6.32755493599344 Q13112 CHAF1B Q13112.T503.p_CHAF1B Q13112_T503t _1_1_503_503 Q13112 Q13112 Chromatin assembly factor 1 subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16770.16770.3 7.72 3.18 99 1 1 1 0 498.3058 1412.9353 T503t TMT10 499 (R) RINLtPLK (T) RINLT(1.0)PLK K:TMT10,t:Phosphorylated T CHAF1B 61947.8 1 7 1182.1 168.89 HUMAN 1 -25.3405 -29.687 TPRRIPHSPAREVDR-p Q13136;S708-p TPRRIPHSPAREVDR 0.652743287373897 0.16496241239687 0.0646666666666667 -0.207 3.47354480975562 10.2910982239612 0.0646666666666667 -0.207 0.449412884191432 0.0935169162957327 0.815057408430644 -2.03148404403338 Q13136 PPFIA1 Q13136.S708.p_PPFIA1 Q13136_S708s _1_1_708_708 Q13136 Q13136|Q13136-2 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4062.4062.4 12.94 12.94 99 1 1 1 0 436.2322 1661.9397 S708s TMT10 704 (R) RIPHsPAREVDR (L) RIPHS(1.0)PAREVDR s:Phosphorylated S PPFIA1 136347 7 30 248.1 410.18 HUMAN 1 3.4735 -10.2911 TPRRRAVSMDNGAKF-p A8MYZ6;S184-p TPRRRAVSMDNGAKF 0.132031969629553 0.400593401263287 -0.333333333333333 -0.119666666666667 18.1575368760891 5.28271165385794 -0.333333333333333 -0.119666666666667 0.0152843267106115 0.296298078182713 -3.49421813095831 -1.15537844092518 A8MYZ6 NotFound A8MYZ6.S184.p_NotFound A8MYZ6_T174tT177tS184s_3_3_174_184 A8MYZ6 A8MYZ6 Forkhead box protein O6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8189.8189.3 8.69 0.37 99 3 3 3 0 930.4584 2532.476 T174t T177t S184s M185m N187n TMT10 174 (K) tGKtPRRRAVsmDnGAK (F) T(1.0)GKT(1.0)PRRRAVS(1.0)M(1.0)DN(1.0)GAK K:TMT10,t:Phosphorylated T,s:Phosphorylated S,m:Oxidized methionine,n:Deamidated FOXO6 50822.2 1 6 2524.1 80 HUMAN 1 -18.1575 -5.2827 TPRRRKASPEPEGEA-p Q8IU81;S384-p TPRRRKASPEPEGEA 0.662515509657473 0.586804910546429 -0.0693333333333333 0.0723333333333333 3.34881735890876 3.13018034565842 -0.0693333333333334 0.0723333333333334 0.462506950988486 0.486387007505649 -0.790412700800278 0.746624177012751 Q8IU81 IRF2BP1 Q8IU81.S384.p_IRF2BP1 Q8IU81_S384s _1_1_384_384 Q8IU81 Q8IU81 Interferon regulatory factor 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7193.7193.3 17.17 17.17 99 1 1 1 0 680.0319 1958.1162 S384s TMT10 382 (R) KAsPEPEGEAAGK (M) KAS(1.0)PEPEGEAAGK K:TMT10,s:Phosphorylated S IRF2BP1 62599.7 27 6 274.1 392.67 HUMAN 1 -3.3488 3.1302 TPRSRERSPSPLRGN-p Q9Y2V2;S30-p TPRSRERSPSPLRGN 0.184253036345983 0.0168833696998921 0.226666666666667 0.360666666666667 14.4410982895334 24.4596193338467 0.226666666666667 0.360666666666667 0.0359658369465299 0.00358127826211454 2.77427106250522 4.90225715711489 Q9Y2V2 CARHSP1 Q9Y2V2.S30.p_CARHSP1 Q9Y2V2_S30s _1_1_30_30 Q9Y2V2 Q9Y2V2|I3L3X8 Calcium-regulated heat-stable protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11684.11684.4 15.12 15.12 2.602 4 1 1 0 631.8495 2444.4047 S30s TMT10 28 (R) ERsPSPLRGNVVPSPLPTRR (T) ERS(0.99)PS(0.0)PLRGNVVPS(0.0)PLPT(0.0)RR s:Phosphorylated S CARHSP1 16120 10 3 1307.1 155.77 HUMAN 1 14.4411 24.4596 TPSATPASPPASATP-p Q4KMQ1;S274-p TPSATPASPPASATP 0.989497403870838 0.8469631671434 0.00466666666666665 -0.0243333333333333 0.0932780419046931 1.01384082885797 0.00466666666666671 -0.0243333333333333 0.978750948211289 0.791800765188286 0.0278882213421476 -0.277319293456528 Q4KMQ1 TPRN Q4KMQ1.S274.p_TPRN Q4KMQ1_S274s _1_1_274_274 Q4KMQ1 Q4KMQ1 Taperin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13661.13661.4 21.3 23.85 1.662 10 1 1 0 872.425 3406.7076 S274s TMT10 252 (K) VESGDPSLHPPPSPGTPSATPAsPPASATPSQR (Q) VES(0.0)GDPS(0.0)LHPPPS(0.0)PGT(0.0)PS(0.0)AT(0.0)PAS(0.99)PPAS(0.0)AT(0.0)PS(0.0)QR s:Phosphorylated S TPRN 75839.7 1 4 1021.1 187.66 HUMAN 1 0.0933 -1.0138 TPSGEVRYAAVTQFE-p P55786;Y173-p TPSGEVRYAAVTQFE 0.1560557092084 0.597316506763798 0.302666666666667 0.0773333333333333 16.2028509143486 3.03002033470468 0.302666666666667 0.0773333333333333 0.0239725872839842 0.497734754460507 3.10723729218093 0.726400657881907 P55786 NPEPPS P55786.Y173.p_NPEPPS P55786_Y173y _1_1_173_173 P55786 P55786|E9PLK3|A6NEC2 Puromycin-sensitive aminopeptidase GG20160819_MSz_CCLE_T4D7_pY_Injection_01.14588.14630.3 15.15 15.15 15.149 3 1 1 0 636.6432 1827.9551 Y173y TMT10 173 (R) yAAVTQFEATDARR (A) Y(0.99)AAVT(0.0)QFEAT(0.0)DARR y:Phosphorylated Y NPEPPS 103959 2 1 238.1 15.15 HUMAN 1 16.2029 3.03 TPSPLDASPRRPPGP-p Q01970;S916-p TPSPLDASPRRPPGP 0.276715622110853 0.0239014418740482 0.265 -0.301333333333333 10.5515157626906 22.1083148048712 0.265 -0.301333333333333 0.0880741425401928 0.00615415626429467 2.07771206762862 -4.34212134616281 Q01970 PLCB3 Q01970.S916.p_PLCB3 Q01970_S916s _1_1_916_916 Q01970 Q01970|Q01970-2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26048.26048.4 28.93 28.93 2.247 10 1 1 0 1223.0717 4809.3071 S916s TMT10 875 (R) QLAALIGESEAQAGQETCQDTQSQQLGSQPSSNPTPSPLDAsPR (R) QLAALIGES(0.0)EAQAGQET(0.0)CQDT(0.0)QS(0.0)QQLGS(0.0)QPS(0.0)S(0.0)NPT(0.0)PS(0.0)PLDAS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S PLCB3 139595.3 2 5 1609.1 127.8 HUMAN 1 10.5515 -22.1083 TPSQHSHSIQHSPER-p Q9NYF8;S264-p TPSQHSHSIQHSPER 0.0955024150221834 0.00129870598737143 0.776666666666667 1.232 21.6346117686493 47.0374376927365 0.776666666666667 1.232 0.00686339229984634 1.97813638261245e-05 4.23887074402485 13.7994430248268 Q9NYF8 BCLAF1 Q9NYF8.S264.p_BCLAF1 Q9NYF8_S264sS268s_2_2_264_268 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|Q9NYF8-4|A0A1W2PQ43|E9PJA7 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3717.3717.3 13.19 13.19 2.945 5 2 2 0 744.3247 2071.0267 S264s S268s TMT10 256 (K) NTPSQHSHsIQHsPER (S) NT(0.0)PS(0.0)QHS(0.0)HS(0.99)IQHS(0.99)PER s:Phosphorylated S BCLAF1 106234.3 3 42 10.1 1293.04 HUMAN 1 21.6346 47.0374 TPSRGPVSPSVSFQP-p Q7Z434;S222-p TPSRGPVSPSVSFQP 0.458814176947663 0.317644062495571 -0.105666666666667 -0.195 6.24158185631887 6.58307592157411 -0.105666666666667 -0.195 0.237597471376234 0.219630377401319 -1.32748748194493 -1.38745605706377 Q7Z434 MAVS Q7Z434.S222.p_MAVS Q7Z434_S222s _1_1_222_222 Q7Z434 Q7Z434|Q7Z434-4 Mitochondrial antiviral-signaling protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19104.19104.2 11.86 11.86 3.4 3 1 1 0 761.3757 1441.7798 S222s Hydrogen 219 (R) GPVsPSVSFQPLAR (S) GPVS(0.99)PS(0.0)VS(0.0)FQPLAR s:Phosphorylated S MAVS 57097.6 2 4 1410.1 145.44 HUMAN 1 -6.2416 -6.5831 TPSRHKRSYEDDDDM-p Q9BTE3;S167-p TPSRHKRSYEDDDDM 0.264733305233018 0.169214323928998 -0.16 0.162333333333333 10.9465847329393 10.145528848147 -0.16 0.162333333333333 0.0804158259071667 0.0967045960566135 -2.14675402843282 2.00618089714832 Q9BTE3 MCMBP Q9BTE3.S167.p_MCMBP Q9BTE3_S167s _1_1_167_167 Q9BTE3 Q9BTE3|Q9BTE3-2 Mini-chromosome maintenance complex-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8954.8954.4 11.41 8.68 11.406 2 1 1 0 719.0994 2793.4081 S167s TMT10 164 (R) HKRsYEDDDDMDLQPNK (Q) HKRS(0.99)Y(0.0)EDDDDMDLQPNK K:TMT10,s:Phosphorylated S MCMBP 73834.6 1 3 2833.1 68.66 HUMAN 1 -10.9466 10.1455 TPSRHSCSGSSPPRV-p Q9UQ35;S892-p TPSRHSCSGSSPPRV 0.388965808310836 0.23716175872294 0.137 0.139666666666667 7.58743441706041 8.23133733823769 0.137 0.139666666666667 0.174283614509449 0.150267916956876 1.56349818371503 1.67472231162089 Q9UQ35 SRRM2 Q9UQ35.S892.p_SRRM2 Q9UQ35_S892s _1_1_892_892 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4513.4717.4 9.43 9.43 1.1 4 1 1 0 459.9855 1756.9529 S892s TMT10 889 (R) HSCsGSSPPRVK (S) HS(0.0)CS(0.99)GS(0.0)S(0.0)PPRVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SRRM2 300351.7 20 34 2.1 3310.34 HUMAN 1 7.5874 8.2313 TPSSSSLSQRVRSTL-p Q9H0H5;S595-p TPSSSSLSQRVRSTL 0.373228695696441 0.0534173747100965 0.148333333333333 -0.235333333333333 7.9339782541 16.9664458616864 0.148333333333333 -0.235333333333333 0.160917091606091 0.0201073766803788 1.62370547061934 -3.25355588490979 Q9H0H5 RACGAP1 Q9H0H5.S595.p_RACGAP1 Q9H0H5_S595s _1_1_595_595 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5949.5949.3 8.73 6.76 1.154 6 1 1 0 538.6132 1533.8546 S595s TMT10 588 (K) TPSSSSLsQRVR (S) T(0.0)PS(0.0)S(0.0)S(0.0)S(0.0)LS(0.99)QRVR s:Phosphorylated S RACGAP1 71709.9 2 15 574.1 268.64 HUMAN 1 7.934 -16.9664 TPSSYIETLPKAVKR-p Q99733-2;T58-p TPSSYIETLPKAVKR 0.761957542148217 0.0310522157874404 -0.0606666666666667 0.286 2.26020037913824 20.3793561654871 -0.0606666666666667 0.286 0.594264739201233 0.00916356328389612 -0.56568418236814 3.95704866704345 Q99733 NAP1L4 Q99733.2.T58.p_NAP1L4 Q99733-2_T58t _1_1_58_58 Q99733-2 Q99733-2 Isoform 2 of Nucleosome assembly protein 1-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21159.21159.4 17.22 14.03 3.667 5 1 1 0 613.0764 2369.3117 T58t TMT10 45 (R) LDNVPHTPSSYIEtLPK (A) LDNVPHT(0.0)PS(0.0)S(0.0)Y(0.0)IET(0.99)LPK K:TMT10,t:Phosphorylated T NAP1L4 44306.2 1 6 1403.1 146.36 HUMAN 1 -2.2602 20.3794 TPSTNNGSDDEKTGL-p Q9Y3P9;S42-p TPSTNNGSDDEKTGL 0.0977397848374227 0.00671367697232148 -0.417 -0.512 21.3826824225578 31.2095771160623 -0.417 -0.512 0.0072733042968233 0.000756906593414773 -4.18217402610662 -6.79739992783935 Q9Y3P9 RABGAP1 Q9Y3P9.S42.p_RABGAP1 Q9Y3P9_S42s_1_1_42_42 Q9Y3P9 Q9Y3P9|Q9Y3P9-3|Q9Y3P9-4|C9JGR5 Rab GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10653.10653.3 17.67 15.81 1.282 5 1 1 0 954.4612 2780.4153 N40n S42s TMT10 31 (R) QGDETPSTNnGsDDEKTGLK (I) QGDET(0.0)PS(0.0)T(0.0)N(0.0)N(0.99)GS(0.99)DDEKT(0.0)GLK K:TMT10,n:Deamidated,s:Phosphorylated S RABGAP1 122989.9 8 4 520.1 284.17 HUMAN 1 -21.3827 -31.2096 TPSVEADSPDQKKII-p Q96HH9;S58-p TPSVEADSPDQKKII 0.25567774491366 0.0153960892303616 -0.165 -0.497333333333333 11.2574021026521 25.0740448577201 -0.165 -0.497333333333333 0.0748617180391368 0.00310881954911626 -2.20126685851429 -5.05621936471494 Q96HH9 GRAMD3 Q96HH9.S58.p_GRAMD3 Q96HH9_S58s _1_1_58_58 Q96HH9 Q96HH9-3|Q96HH9-4|E9PD09|D6RFH3|D6R9P9 GRAM domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10603.10603.4 16.34 16.34 1.745 6 1 1 0 710.1202 2757.4874 S58s TMT10 44 (R) SPTAQSPTPSVEADsPDQKK (I) S(0.0)PT(0.0)AQS(0.0)PT(0.0)PS(0.0)VEADS(0.99)PDQKK K:TMT10,s:Phosphorylated S GRAMD2B 48324.7 1 5 735.1 235.43 HUMAN 1 -11.2574 -25.074 TPSWLQPSPTGKDRK-p O60303;S758-p TPSWLQPSPTGKDRK 0.97105532437651 0.0393337761103315 -0.00633333333333334 -0.274333333333333 0.250359218587445 18.8592399664309 -0.00633333333333333 -0.274333333333333 0.943982793279128 0.0130039713307675 -0.0735868252279901 -3.63513826706731 O60303 KIAA0556 O60303.S758.p_KIAA0556 O60303_S758s _1_1_758_758 O60303 O60303 Protein KIAA0556 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20285.20285.3 7.73 7.73 7.726 4 1 1 0 612.9944 1756.9998 S758s TMT10 751 (K) TPSWLQPsPTGK (D) T(0.0)PS(0.0)WLQPS(0.99)PT(0.0)GK K:TMT10,s:Phosphorylated S KIAA0556 182055.4 1 8 1063.1 181.85 HUMAN 1 -0.2504 -18.8592 TPTAAESSEGEGEEG-p Q96S55;S92-p TPTAAESSEGEGEEG 0.171396449036957 0.105884342572034 0.305666666666667 0.228666666666667 15.2467773492311 12.8831240465641 0.305666666666667 0.228666666666667 0.0298759872260242 0.0514858154151919 2.9248638938864 2.4886768937809 Q96S55 WRNIP1 Q96S55.S92.p_WRNIP1 Q96S55_S91sS92s_2_2_91_92 Q96S55 Q96S55|Q96S55-2 ATPase WRNIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15719.15923.5 31.61 31.61 5.526 13 2 2 0 1091.8844 5295.4573 S91s S92s TMT10 74 (R) LSESSALKQPATPTAAEssEGEGEEGDDGGETESRESYDAPPTPSGAR (L) LS(0.0)ES(0.0)S(0.0)ALKQPAT(0.0)PT(0.0)AAES(0.99)S(0.99)EGEGEEGDDGGET(0.0)ES(0.0)RES(0.0)Y(0.0)DAPPT(0.0)PS(0.0)GAR K:TMT10,s:Phosphorylated S WRNIP1 72873.4 10 7 519.1 284.6 HUMAN 1 15.2468 12.8831 TPTCLGGSPAAERPA-p O00257;S442-p TPTCLGGSPAAERPA 0.222079109388678 0.261741524823828 -0.21 -0.168333333333333 12.5758213201454 7.66921821319755 -0.21 -0.168333333333333 0.0552608890905158 0.17103231678941 -2.43490570010907 -1.57724230150019 O00257 CBX4 O00257.S442.p_CBX4 O00257_S442sS467s_2_2_442_467 O00257 O00257|O00257-3 E3 SUMO-protein ligase CBX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.36642.36642.5 27.37 27.37 1.136 6 2 2 0 1014.3042 4907.555 S442s S467s TMT10 432 (R) SISTPTCLGGsPAAERPADLPPAAALPQPEVILLDsDLDEPIDLR (C) S(0.0)IS(0.0)T(0.0)PT(0.0)CLGGS(0.99)PAAERPADLPPAAALPQPEVILLDS(0.99)DLDEPIDLR C:Carbamidomethylation,s:Phosphorylated S CBX4 61708.7 4 6 1504.1 135.77 HUMAN 1 -12.5758 -7.6692 TPTGYIESLPRVVKR-p F5H4R6;S69-p TPTGYIESLPRVVKR 0.56180416027387 0.729961018828838 -0.0816666666666667 -0.054 4.60854053009262 1.88344222435079 -0.0816666666666667 -0.054 0.346055652146299 0.648120528644977 -1.03180638219901 -0.482777043767704 F5H4R6 NAP1L1 F5H4R6.S69.p_NAP1L1 F5H4R6_S69s _1_1_69_69 F5H4R6 P55209|F5H4R6|F8W0J6|P55209-2|B7Z9C2|F8VV59|P55209-3 Nucleosome assembly protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.28765.28765.3 18.43 18.43 1.128 4 1 1 0 723.7059 2089.1379 S69s TMT10 56 (R) LDGLVETPTGYIEsLPR (V) LDGLVET(0.0)PT(0.0)GY(0.0)IES(0.99)LPR s:Phosphorylated S NAP1L1 44911.2 2 3 836.1 215.14 HUMAN 1 -4.6085 -1.8834 TPTHYKLTPRPATRV-p P52948;T553-p TPTHYKLTPRPATRV 0.288174796119179 0.218077891945537 0.153333333333333 -0.127333333333333 10.1891339247177 8.70309875970268 0.153333333333333 -0.127333333333333 0.095738497512297 0.134800071957512 2.01458948641152 -1.75635964930125 P52948 NUP98 P52948.T553.p_NUP98 P52948_T553t _1_1_553_553 P52948 P52948|P52948-5|P52948-2 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.10803.10803.4 13.31 7.69 2.082 6 1 1 0 616.3462 2382.4022 T553t TMT10 543 (K) ALTTPTHYKLtPRPATR (V) ALT(0.0)T(0.0)PT(0.0)HY(0.0)KLT(0.99)PRPAT(0.0)R K:TMT10,t:Phosphorylated T NUP98 198716.8 1 3 187.1 472.84 HUMAN 1 10.1891 -8.7031 TPTKAPYSPTTSKEK-p Q96JH7;S768-p TPTKAPYSPTTSKEK 0.202247703341141 0.0769706679382071 0.484 -0.325666666666667 13.4720243303269 14.7754417127813 0.484 -0.325666666666667 0.0449570252683245 0.0333008890875859 2.59648125160195 -2.83462438514372 Q96JH7 VCPIP1 Q96JH7.S768.p_VCPIP1 Q96JH7_S768s _1_1_768_768 Q96JH7 Q96JH7 Deubiquitinating protein VCIP135 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12710.12710.3 18.1 18.1 1.733 9 1 1 0 943.4941 2748.5023 S768s TMT10 753 (R) DGPSSAPATPTKAPYsPTTSK (E) DGPS(0.0)S(0.0)APAT(0.0)PT(0.0)KAPY(0.0)S(0.99)PT(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S VCPIP1 135687.4 9 4 725.1 236.71 HUMAN 1 13.472 -14.7754 TPTKQKASPAPPQLC-p Q92800-2;S422-p TPTKQKASPAPPQLC 0.237173441215513 0.0134498128763692 0.179 0.375666666666667 11.974357231364 26.0177702532974 0.179 0.375666666666667 0.0634693830588155 0.00250162941399069 2.32778709904598 5.29928388139641 Q92800 EZH1 Q92800.2.S422.p_EZH1 Q92800-2_S422s _1_1_422_422 Q92800-2 Q92800-2|A0A0A0MSY9|Q92800-3|Q92800-4|Q92800-5 Isoform 2 of Histone-lysine N-methyltransferase EZH1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29164.29164.5 29.61 25.92 11.338 4 1 1 0 790.399 3867.9991 S422s TMT10 419 (K) QKAsPAPPQLCVVEAPSEPVEWTGAEESLFR (V) QKAS(0.99)PAPPQLCVVEAPS(0.0)EPVEWT(0.0)GAEES(0.0)LFR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S EZH1 88134.4 6 2 3087.1 61.11 HUMAN 1 11.9744 26.0178 TPTSPKYSPTSPKYS-p P24928;S1861-p TPTSPKYSPTSPKYS 0.671117799702288 0.411944189200086 -0.0796666666666667 -0.0783333333333333 3.24386097950912 5.12361115422448 -0.0796666666666667 -0.0793393305827642 0.473820560400662 0.307354010644797 -0.769522558988885 -1.12643051716485 P24928 POLR2A P24928.S1861.p_POLR2A P24928_S1861s _1_1_1861_1861 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17932.17932.4 16.94 16.94 1.126 17 1 1 0 951.225 3721.9092 S1861s TMT10 1839 (K) YTPTSPSYSPSSPEYTPTSPKYsPTSPK (Y) Y(0.0)T(0.0)PT(0.0)S(0.0)PS(0.0)Y(0.0)S(0.0)PS(0.0)S(0.0)PEY(0.0)T(0.0)PT(0.0)S(0.0)PKY(0.0)S(0.99)PT(0.0)S(0.0)PK K:TMT10,s:Phosphorylated S POLR2A 218541.6 5 3 920.1 200.24 HUMAN 1 -3.2439 -5.1236 TPVASKFSPGAPGGS-p Q15942;S281-p TPVASKFSPGAPGGS 0.0956171041021503 0.00171039759294762 -0.319333333333333 -0.928666666666667 21.6191884815455 43.9354014279377 -0.319333333333333 -0.928666666666667 0.00688780989267445 4.04073023429376e-05 -4.23538645035594 -12.0513973371567 Q15942 ZYX Q15942.S281.p_ZYX Q15942_S281s _1_1_281_281 Q15942 Q15942|Q15942-2 Zyxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19034.19034.3 16.38 14.4 2.57 5 1 1 0 1005.1955 2933.6088 S281s TMT10 273 (K) FTPVASKFsPGAPGGSGSQPNQK (L) FT(0.0)PVAS(0.0)KFS(0.99)PGAPGGS(0.0)GS(0.0)QPNQK K:TMT10,s:Phosphorylated S ZYX 62474.4 6 6 1126.1 174.71 HUMAN 1 -21.6192 -43.9354 TPVATSPTATDSTSG-p P54727;T162-p TPVATSPTATDSTSG 0.727791177326058 0.135865093863222 0.055 0.357333333333333 2.61800942890387 11.4240641867229 0.055 0.357333333333333 0.547266742903595 0.072043297266929 0.641697269665387 2.22952563240565 P54727 RAD23B P54727.T162.p_RAD23B P54727_T162t _1_1_162_162 P54727 P54727|P54727-2 UV excision repair protein RAD23 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9595.9595.5 14.11 14.11 1.188 10 1 1 0 743.3762 3632.8858 T162t TMT10 145 (K) QEKPAEKPAETPVATSPtATDSTSGDSSR (S) QEKPAEKPAET(0.0)PVAT(0.0)S(0.0)PT(0.99)AT(0.0)DS(0.0)T(0.0)S(0.0)GDS(0.0)S(0.0)R K:TMT10,t:Phosphorylated T RAD23B 43227.5 6 3 3020.1 63.09 HUMAN 1 2.618 11.4241 TPVCSRFSPPEPGDT-p O14686-3;S373-p TPVCSRFSPPEPGDT 0.576683296043079 0.142446014034025 0.0966666666666667 0.149666666666667 4.39755354335511 11.1521824942076 0.0966666666666667 0.149666666666667 0.363282640595713 0.0766975958039125 0.992399575696553 2.18179274088081 O14686 KMT2D O14686.3.S373.p_KMT2D O14686-3_S373s _1_1_373_373 O14686-3 O14686|O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25213.25213.4 14.78 14.78 2.963 4 1 1 0 839.3954 3274.5978 S373s TMT10 372 (R) FsPPEPGDTPTDEPDALYVACQGQPK (G) FS(0.99)PPEPGDT(0.0)PT(0.0)DEPDALY(0.0)VACQGQPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2D 600227.3 6 3 17.1 1042.08 HUMAN 1 4.3976 11.1522 TPVFVSPTPPPPPPP-p Q92558;T323-p TPVFVSPTPPPPPPP 0.74221855859011 0.845756820539625 -0.0523333333333333 0.021 2.45828321450042 1.02293188665025 -0.0523333333333334 0.021 0.567769002677644 0.790145027437432 -0.608059555831287 0.279593174747251 Q92558 WASF1 Q92558.T323.p_WASF1 Q92558_T323t _1_1_323_323 Q92558 Q92558 Wiskott-Aldrich syndrome protein family member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.31192.31192.4 22.74 22.74 2.524 8 1 1 0 737.8989 2868.6072 T323t TMT10 316 (R) TPVFVSPtPPPPPPPLPSALSTSSLR (A) T(0.0)PVFVS(0.0)PT(0.99)PPPPPPPLPS(0.0)ALS(0.0)T(0.0)S(0.0)S(0.0)LR t:Phosphorylated T WASF1 61936.4 2 2 4253.1 34.64 HUMAN 1 -2.4583 1.0229 TPVKDRFSAEDEALS-p Q9Y608;S18-p TPVKDRFSAEDEALS 0.0739261060777586 0.0706842052779215 -0.492 -0.277 24.2869009329861 15.2967960513773 -0.492 -0.277 0.00372657534802357 0.0295338724453923 -4.86540850436832 -2.93234299590161 Q9Y608 LRRFIP2 Q9Y608.S18.p_LRRFIP2 Q9Y608_S18s _1_1_18_18 Q9Y608 Q9Y608|Q9Y608-5|Q9Y608-4 Leucine-rich repeat flightless-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17857.17857.3 9.17 9.17 4.673 2 1 1 0 668.3193 1922.9769 S18s TMT10 15 (K) DRFsAEDEALSNIAR (E) DRFS(0.99)AEDEALS(0.0)NIAR s:Phosphorylated S LRRFIP2 82398.2 1 1 1556.1 131.81 HUMAN 1 -24.2869 -15.2968 TPVPLLGSDKSAFTR-p Q96R06;S944-p TPVPLLGSDKSAFTR 0.233628206047255 0.223963577558372 -0.293 -0.252 12.1092285728074 8.55766459385468 -0.293 -0.252 0.0615286154853211 0.139390617049543 -2.3517237709469 -1.73120150149007 Q96R06 SPAG5 Q96R06.S944.p_SPAG5 Q96R06_S944s _1_1_944_944 Q96R06 Q96R06 Sperm-associated antigen 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.37232.37232.4 25.25 25.25 5.096 6 1 1 0 831.9368 3244.7605 S944s TMT10 920 (R) TFLGSILTAVADEEPESTPVPLLGsDK (S) T(0.0)FLGS(0.0)ILT(0.0)AVADEEPES(0.0)T(0.0)PVPLLGS(0.99)DK K:TMT10,s:Phosphorylated S SPAG5 135788.8 3 14 612.1 261.64 HUMAN 1 -12.1092 -8.5577 TPVSLSNSPIKGADC-p P46100;S598-p TPVSLSNSPIKGADC 0.23893796299282 0.00172752646433129 0.362333333333333 -1.45033333333333 11.8885706307588 43.7405214286966 0.362333333333333 -1.45033333333333 0.0647355641247608 4.22617870283383e-05 2.31258560562519 -11.9488629757269 P46100 ATRX P46100.S598.p_ATRX P46100_S598s _1_1_598_598 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21143.21143.4 23.67 17.16 2.148 4 1 1 0 813.4329 3170.7334 S598s TMT10 590 (K) LTPVSLSNsPIKGADCQEVPQDK (D) LT(0.0)PVS(0.0)LS(0.0)NS(0.99)PIKGADCQEVPQDK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ATRX 285034.2 9 10 18.1 1035.36 HUMAN 1 11.8886 -43.7405 TPVSPAPSPTRGFGK-p G1UD79;S138-p TPVSPAPSPTRGFGK 0.603510877638601 0.287078756693384 -0.074 0.127 4.04952679532967 7.14992588126173 -0.074 0.127 0.393592958772877 0.192755780951811 -0.926584926771579 1.48681264095659 G1UD79 FAM122B G1UD79.S138.p_FAM122B G1UD79_S138s _1_1_138_138 G1UD79 G1UD79|Q7Z309-3|Q7Z309-2|Q7Z309-4|Q7Z309-5 Protein FAM122B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16720.16720.3 19.32 19.32 1.338 4 1 1 0 650.6742 1870.0384 S138s TMT10 127 (K) RIDFTPVSPAPsPTR (G) RIDFT(0.0)PVS(0.0)PAPS(0.99)PT(0.0)R s:Phosphorylated S SPACIA2 29414.5 3 5 835.1 215.14 HUMAN 1 -4.0495 7.1499 TPVSQLGSADFPEAP-p Q9UBC2-2;S804-p TPVSQLGSADFPEAP 0.329958835870558 0.310060256385774 -0.156 0.109333333333333 9.00245072108737 6.71989936627943 -0.156 0.109333333333333 0.125821520136393 0.212818835930358 -1.80878709150959 1.41151393231451 Q9UBC2 EPS15L1 Q9UBC2.2.S804.p_EPS15L1 Q9UBC2-2_S804s _1_1_804_804 Q9UBC2-2 Q9UBC2-2 Isoform 2 of Epidermal growth factor receptor substrate 15-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33659.33659.3 16.29 16.29 1.158 6 1 1 0 1309.9637 3847.9067 S804s TMT10 796 (K) STPVSQLGsADFPEAPDPFQPLGADSGDPFQSK (K) S(0.0)T(0.0)PVS(0.0)QLGS(0.99)ADFPEAPDPFQPLGADS(0.0)GDPFQS(0.0)K K:TMT10,s:Phosphorylated S EPS15L1 99718.3 1 19 109.1 576.24 HUMAN 1 -9.0025 6.7199 TPVTERVS_______-p P51608-2;S498-p TPVTERVS_______ 0.954219315290741 0.0439294756594439 -0.0146666666666667 0.500333333333333 0.399050952995315 18.1796076181299 -0.0146666666666666 0.500333333333333 0.912210159349596 0.0152068491628971 -0.115505037630802 3.49580801640191 P51608 MECP2 P51608.2.S498.p_MECP2 P51608-2_S498s _1_1_498_498 P51608-2 P51608-2 Isoform B of Methyl-CpG-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7478.7478.2 7.44 7.44 7.437 3 1 1 0 599.3077 1117.6415 S498s TMT10 491 (R) TPVTERVs (-) T(0.0)PVT(0.0)ERVS(0.99) s:Phosphorylated S MECP2 53493.6 1 8 1786.1 114.94 HUMAN 1 -0.3991 18.1796 TPVTVAYSPKRSPKE-p Q99550;S984-p TPVTVAYSPKRSPKE 0.965625294875215 0.0198671465112932 -0.00700000000000001 -0.418666666666667 0.293342302067679 23.3456730876715 -0.00700000000000001 -0.418666666666667 0.934686068965848 0.00462841925049813 -0.0858324622124197 -4.63133483953187 Q99550 MPHOSPH9 Q99550.S984.p_MPHOSPH9 Q99550_S984s _1_1_984_984 Q99550 Q99550|Q99550-2|A0A0A0MTP3 M-phase phosphoprotein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28044.28044.3 16.28 16.28 1.693 4 1 1 0 696.3807 2007.1601 S984s TMT10 973 (R) EIMLTPVTVAYsPK (R) EIMLT(0.0)PVT(0.0)VAY(0.0)S(0.99)PK K:TMT10,s:Phosphorylated S MPHOSPH9 133763.4 4 6 1356.1 150.46 HUMAN 1 -0.2933 -23.3457 TPVVSTPSKVTAAAM-p P12270;S1679-p TPVVSTPSKVTAAAM 0.687180225755767 0.227641136635105 0.071 0.129333333333333 3.05864504124599 8.46641567494195 0.071 0.129333333333333 0.494464931425215 0.142350314997673 0.732298802037916 1.71541352029114 P12270 TPR P12270.S1679.p_TPR P12270_S1679s_1_1_1679_1679 P12270 P12270 Nucleoprotein TPR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18833.18833.4 9.44 7.01 1.594 8 1 1 0 784.1848 3052.7497 N1668n S1679s TMT10 1657 (R) GIASTSDPPTAnIKPTPVVSTPsK (V) GIAS(0.0)T(0.0)S(0.0)DPPT(0.0)AN(1.0)IKPT(0.0)PVVS(0.0)T(0.0)PS(0.99)K K:TMT10,n:Deamidated,s:Phosphorylated S TPR 267687.4 1 13 385.1 333.55 HUMAN 1 3.0586 8.4664 TPYTLNFSFEELNTL-p Q9ULH0-4;S1310-p TPYTLNFSFEELNTL 0.357716781962321 0.499258598426201 0.163 -0.0953333333333333 8.29938218021074 4.03633686264035 0.163 -0.0953333333333333 0.147931881852669 0.394790154758677 1.68705958448304 -0.92391154722471 Q9ULH0 KIDINS220 Q9ULH0.4.S1310.p_KIDINS220 Q9ULH0-4_S1310s _1_1_1310_1310 Q9ULH0-4 Q9ULH0|Q9ULH0-4|Q9ULH0-2|A0A1W2PPB7|Q9ULH0-5 Isoform 4 of Kinase D-interacting substrate of 220 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29475.29475.4 20.36 20.36 1.195 9 1 1 0 1106.7885 4344.1258 S1310s TMT10 1289 (R) ASHNELPHTELSSQTPYTLNFsFEELNTLGLDEGAPR (H) AS(0.0)HNELPHT(0.0)ELS(0.0)S(0.0)QT(0.0)PY(0.0)T(0.0)LNFS(0.99)FEELNT(0.0)LGLDEGAPR s:Phosphorylated S KIDINS220 196163.1 3 7 306.1 373.6 HUMAN 1 8.2994 -4.0363 TQADSDESEDDLVLN-p A2RU67;S33-p TQADSDESEDDLVLN 0.697940557057149 0.0353084954102099 0.0873333333333333 0.580333333333333 2.93561337925982 19.5467950542072 0.0873333333333333 0.580333333333333 0.508672971740012 0.0110999365070842 0.707304033166464 3.77892143900775 A2RU67 FAM234B A2RU67.S33.p_FAM234B A2RU67_S33s_1_1_33_33 A2RU67 A2RU67 Protein FAM234B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28775.28775.4 15.56 15.56 1.73 5 1 1 0 1001.4954 3922.006 S33s N40n TMT10 15 (K) KSPDLGEYDPLTQADSDEsEDDLVLnLQK (N) KS(0.0)PDLGEY(0.0)DPLT(0.0)QADS(0.0)DES(0.99)EDDLVLN(1.0)LQK K:TMT10,s:Phosphorylated S,n:Deamidated FAM234B 67493.8 1 1 5341.1 20.28 HUMAN 1 2.9356 19.5468 TQAEEDLSEQEQNQL-p Q8NC60;S419-p TQAEEDLSEQEQNQL 0.236860010933749 0.0263080103568939 0.201333333333333 0.319 11.9842503832936 21.4739702403266 0.201333333333333 0.319 0.0633249654730915 0.00712201650774096 2.32954135174825 4.19836173216184 Q8NC60 NOA1 Q8NC60.S419.p_NOA1 Q8NC60_S419s _1_1_419_419 Q8NC60 Q8NC60 Nitric oxide-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20206.20206.4 16.1 16.1 10.11 3 1 1 0 829.1737 3233.7104 S419s TMT10 410 (K) DSTQAEEDLsEQEQNQLNVLKK (H) DS(0.0)T(0.0)QAEEDLS(0.99)EQEQNQLNVLKK K:TMT10,s:Phosphorylated S NOA1 79026.9 3 1 5105.1 22.9 HUMAN 1 11.9843 21.474 TQAPAPASEDEKVVV-p F5GWX5;S1595-p TQAPAPASEDEKVVV 0.597918768837268 0.0824598277305984 -0.0913333333333333 0.241333333333333 4.12486699446228 14.3580004585365 -0.0913333333333333 0.241333333333333 0.386823901187703 0.0366606325542462 -0.940924033665758 2.75718274906787 F5GWX5 CHD4 F5GWX5.S1595.p_CHD4 F5GWX5_S1595s _1_1_1595_1595 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19625.19625.4 25.61 21.34 4.944 5 1 1 0 1066.5262 4183.1207 S1595s TMT10 1578 (K) STAPETAIECTQAPAPAsEDEKVVVEPPEGEEK (V) S(0.0)T(0.0)APET(0.0)AIECT(0.0)QAPAPAS(0.99)EDEKVVVEPPEGEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CHD4 218583 3 24 49.1 753.68 HUMAN 1 -4.1249 14.358 TQAPTKASE______-p P47914;S158-p TQAPTKASE______ 0.00861592953244037 0.000952253650599092 -1.69466666666667 -1.89333333333333 56.6413580188716 57.5679658016288 -1.69466666666667 -1.89333333333333 2.16702637968173e-06 1.75066649389285e-06 -20.9663683002729 -21.7375281205955 P47914 RPL29 P47914.S158.p_RPL29 P47914_S158s _1_1_158_158 P47914 P47914 60S ribosomal protein L29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5933.5933.2 9.4 9.4 3.081 3 1 1 0 735.8841 1390.7942 S158s TMT10 151 (R) TQAPTKAsE (-) T(0.0)QAPT(0.0)KAS(0.99)E K:TMT10,s:Phosphorylated S RPL29 17808.8 3 4 2966.1 64.48 HUMAN 1 -56.6414 -57.568 TQAQRFHSPKKNPED-p Q96PZ2;S62-p TQAQRFHSPKKNPED 0.29811865803364 0.0383760722253743 -0.225666666666667 -0.728333333333333 9.88580275722844 19.0232629938543 -0.225666666666667 -0.728333333333333 0.102664364758922 0.012522000033604 -1.96187715639253 -3.66917523544207 Q96PZ2 FAM111A Q96PZ2.S62.p_FAM111A Q96PZ2_S62s _1_1_62_62 Q96PZ2 Q96PZ2 Protein FAM111A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7723.7723.5 16.07 10.45 3.347 2 1 1 0 565.094 2741.476 S62s TMT10 60 (R) FHsPKKNPEDQTMPQNR (T) FHS(0.99)PKKNPEDQT(0.0)MPQNR K:TMT10,s:Phosphorylated S FAM111A 71050.8 4 2 2239.1 92.18 HUMAN 1 -9.8858 -19.0233 TQATGSRSVPMPLSN-p Q86VQ1;S277-p TQATGSRSVPMPLSN 0.790671547034773 0.102555695787677 0.0583333333333333 0.282666666666667 1.96881542257714 13.0625491229518 0.0583333333333333 0.282666666666667 0.635504247737084 0.0494020632877922 0.501884863693417 2.52095295832293 Q86VQ1 GLCCI1 Q86VQ1.S277.p_GLCCI1 Q86VQ1_S277s _1_1_277_277 Q86VQ1 Q86VQ1 Glucocorticoid-induced transcript 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27610.27610.3 13.7 11.56 6.187 3 1 1 0 636.3543 1827.0814 S277s TMT10 277 (R) sVPMPLSNISVPK (S) S(0.99)VPMPLS(0.0)NIS(0.0)VPK K:TMT10,s:Phosphorylated S GLCCI1 58707.2 4 10 307.1 373.49 HUMAN 1 1.9688 13.0625 TQAVNRRSALGDLAG-p E5RI87;S341-p TQAVNRRSALGDLAG 0.422807784151987 0.427028106063986 0.107 -0.084 6.88570092795104 4.91889029324067 0.107 -0.084 0.204847141100108 0.32218919420872 1.44099055767552 -1.08895607823493 E5RI87 RNF130 E5RI87.S341.p_RNF130 E5RI87_S341s _1_1_341_341 E5RI87 Q86XS8|E5RI87 E3 ubiquitin-protein ligase RNF130 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28014.28014.3 14.92 14.92 8.937 2 1 1 0 703.0246 2027.0971 S341s TMT10 341 (R) sALGDLAGDNSLGLEPLR (T) S(0.99)ALGDLAGDNS(0.0)LGLEPLR s:Phosphorylated S RNF130 47187.4 1 1 4563.1 29.79 HUMAN 1 6.8857 -4.9189 TQCSRDHSMEDPDKK-p Q9C0C9;S411-p TQCSRDHSMEDPDKK 0.504670395998139 0.100950921016304 -0.093 -0.277333333333333 5.48446732672384 13.1573878886813 -0.093 -0.277333333333333 0.28284810101943 0.0483349430393516 -1.19214515042905 -2.53805369858037 Q9C0C9 UBE2O Q9C0C9.S411.p_UBE2O Q9C0C9_S411s _1_1_411_411 Q9C0C9 Q9C0C9 (E3-independent) E2 ubiquitin-conjugating enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5657.5666.4 12.77 12.77 12.773 2 1 1 0 593.2965 2290.1952 S411s Hydrogen 409 (R) DHsMEDPDKKGESK (T) DHS(0.99)MEDPDKKGES(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S UBE2O 142717.3 1 6 308.1 373.27 HUMAN 1 -5.4845 -13.1574 TQDLVDESEEERFDD-p Q6IN85;S117-p TQDLVDESEEERFDD 0.826605132693876 0.416998133345667 0.0396666666666667 0.0973333333333334 1.59557712181509 5.05216389334822 0.0396666666666667 0.0973333333333334 0.692535894160355 0.312452217086955 0.417252665608206 1.11338186130293 Q6IN85 PPP4R3A Q6IN85.S117.p_PPP4R3A Q6IN85_S117s_1_1_117_117 Q6IN85 Q6IN85|Q6IN85-2|G3V5Z3|Q6IN85-5 Serine/threonine-protein phosphatase 4 regulatory subunit 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26860.26860.4 19.07 19.07 1.997 7 1 1 0 1366.8839 5368.5547 S117s M125m TMT10 97 (K) ICQVQGKDPSVDITQDLVDEsEEERFDDmSSPGLELPSCELSR (L) ICQVQGKDPS(0.0)VDIT(0.0)QDLVDES(0.99)EEERFDDM(1.0)S(0.0)S(0.0)PGLELPS(0.0)CELS(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,m:Oxidized methionine PPP4R3A 95994.2 4 1 842.1 214.14 HUMAN 1 1.5956 5.0522 TQDMENMSDDDGWEF-p O00410-3;S670-p TQDMENMSDDDGWEF 0.895194839515042 0.986854821117636 -0.0193333333333333 0.00200000000000002 0.942175784690212 0.0866640111100369 -0.0193333333333333 0.00200000000000002 0.804975053342213 0.980242659720993 -0.259310268440641 0.0259275256722604 O00410 IPO5 O00410.3.S670.p_IPO5 O00410-3_S670s_1_1_670_670 O00410-3 O00410-3|O00410-2 Isoform 3 of Importin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32636.32636.4 25.13 25.13 4.339 5 1 1 0 1282.6191 5031.4847 M669m S670s TMT10 651 (K) TASIKPEVALLDTQDMENmsDDDGWEFVNLGDQQSFGIK (T) T(0.0)AS(0.0)IKPEVALLDT(0.0)QDM(0.0)ENM(0.99)S(0.99)DDDGWEFVNLGDQQS(0.0)FGIK K:TMT10,m:Oxidized methionine,s:Phosphorylated S IPO5 127026.3 17 2 2973.1 64.3 HUMAN 1 -0.9422 0.0867 TQDQQSLSDVEGAYS-p P06401;S81-p TQDQQSLSDVEGAYS 0.692464643836822 0.0196240111735585 0.0686666666666667 0.326333333333333 2.99294302016115 23.4387058971154 0.0686666666666667 0.326333333333333 0.502002289652343 0.00453032553618375 0.718978581920152 4.65356867093779 P06401 PGR P06401.S81.p_PGR P06401_S81s _1_1_81_81 P06401 P06401|P06401-5|Q8NG42|Q8NG44 Progesterone receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13723.13723.3 21.24 21.24 2.331 5 1 1 0 698.3183 2012.9722 S81s TMT10 74 (K) TQDQQSLsDVEGAYSR (A) T(0.0)QDQQS(0.0)LS(0.99)DVEGAY(0.0)S(0.0)R s:Phosphorylated S PGR 100348.6 3 3 260.1 397.57 HUMAN 1 2.9929 23.4387 TQDRSRLSWPGRSAR-p Q96KG9-4;S755-p TQDRSRLSWPGRSAR 0.541889421880085 0.0139397692534253 -0.22 -0.483 4.90996883926762 25.7533025527502 -0.22 -0.483 0.322851728631785 0.00265870250482534 -1.08753330348697 -5.23034431384389 Q96KG9 SCYL1 Q96KG9.4.S755.p_SCYL1 Q96KG9-4_S755s _1_1_755_755 Q96KG9-4 Q96KG9-6|Q96KG9-4 Isoform 4 of N-terminal kinase-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11369.11369.3 9.04 9.04 2.727 2 1 1 0 423.2222 1187.6847 S755s TMT10 752 (R) SRLsWPGR (S) S(0.0)RLS(0.99)WPGR s:Phosphorylated S SCYL1 86937.5 1 6 1407.99 145.7 HUMAN 1 -4.91 -25.7533 TQDSRMESPIPILPL-p G3XAH0;S336-p TQDSRMESPIPILPL 0.924244864824156 0.530143298260521 -0.02 0.0746666666666667 0.675038655877531 3.70627625133606 -0.02 0.0746666666666667 0.856044092170633 0.425963488264841 -0.19025374191732 0.860412416313736 G3XAH0 NotFound G3XAH0.S336.p_NotFound G3XAH0_S336s _1_1_336_336 G3XAH0 G3XAH0|Q99719|B4DJ62 HCG2002594, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.32887.32887.3 17.87 17.18 8.597 3 1 1 0 872.7941 2536.3985 S336s TMT10 334 (R) MEsPIPILPLPTPDAETEK (L) MES(0.99)PIPILPLPT(0.0)PDAET(0.0)EK K:TMT10,s:Phosphorylated S SEPT5 44300.9 8 3 1524.1 134.16 HUMAN 1 -0.675 3.7063 TQDVENMSDDDGWQF-p O60518;S660-p TQDVENMSDDDGWQF 0.711022885496465 0.359422834268791 -0.0563333333333333 -0.128333333333333 2.78608343513408 5.89652088260395 -0.0563333333333333 -0.128333333333333 0.526491854502729 0.257245574254221 -0.676618127660318 -1.2658113656988 O60518 RANBP6 O60518.S660.p_RANBP6 O60518_S660s _1_1_660_660 O60518 O60518 Ran-binding protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.33012.33012.5 30.68 28.05 7.172 5 1 1 0 1005.2949 4942.466 S660s TMT10 641 (K) TASAKPDVALLDTQDVENMsDDDGWQFVNLGDQQSFGIK (T) T(0.0)AS(0.0)AKPDVALLDT(0.0)QDVENMS(0.99)DDDGWQFVNLGDQQS(0.0)FGIK K:TMT10,s:Phosphorylated S RANBP6 126251.8 13 1 4497.1 30.68 HUMAN 1 -2.7861 -5.8965 TQEKRRRSFPDIEDE-p Q5VUA4;S527-p TQEKRRRSFPDIEDE 0.645166976093224 0.206224359616507 0.0683333333333333 -0.134333333333333 3.56247457486847 9.02251151271609 0.0683333333333333 -0.134333333333333 0.440303910407164 0.125241669644333 0.832514311314864 -1.81160641386302 Q5VUA4 ZNF318 Q5VUA4.S527.p_ZNF318 Q5VUA4_S527s _1_1_527_527 Q5VUA4 Q5VUA4|Q5VUA4-2 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17051.17051.2 17.14 17.14 99 1 1 1 0 759.3351 1437.6947 S527s Hydrogen 527 (R) sFPDIEDEEK (F) S(1.0)FPDIEDEEK K:TMT10-Lys-Only,s:Phosphorylated S ZNF318 252762.4 5 14 37.1 870.88 HUMAN 1 3.5625 -9.0225 TQEKTSNSLTEDSKM-p Q12888-2;S867-p TQEKTSNSLTEDSKM 0.359362450321461 0.724276527765148 -0.138666666666667 0.058 8.25819404137926 1.92839254812438 -0.138666666666667 0.058 0.149341529832066 0.641446951074539 -1.67992322450416 0.492828530818735 Q12888 TP53BP1 Q12888.2.S867.p_TP53BP1 Q12888-2_S867s _1_1_867_867 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8729.8729.2 13.11 9.05 1.115 5 1 1 0 810.4013 1539.8266 S867s TMT10 864 (K) TSNsLTEDSK (M) T(0.0)S(0.0)NS(0.99)LT(0.0)EDS(0.0)K K:TMT10,s:Phosphorylated S TP53BP1 216167.2 5 39 3.1 2297.07 HUMAN 1 -8.2582 1.9284 TQELDRDSEEEEEED-p Q14687;S1101-p TQELDRDSEEEEEED 0.456411337786712 0.0224543745599027 -0.228666666666667 0.383666666666667 6.27919416595252 22.5215294293761 -0.228666666666667 0.383666666666667 0.235548630417902 0.00559560509653741 -1.33415110828676 4.43738317544485 Q14687 GSE1 Q14687.S1101.p_GSE1 Q14687_S1101s _1_1_1101_1101 Q14687 Q14687|Q14687-3|Q14687-2 Genetic suppressor element 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10559.10559.5 30.58 30.58 3.905 2 1 1 0 977.6641 4804.3214 S1101s TMT10 1090 (R) KGPPTQELDRDsEEEEEEDDEDGEDEEEVPKRK (W) KGPPT(0.0)QELDRDS(0.99)EEEEEEDDEDGEDEEEVPKRK K:TMT10,s:Phosphorylated S GSE1 136446.7 6 16 221.1 428.09 HUMAN 1 -6.2792 22.5215 TQELKGLSGGEERPE-p Q9H6E5;S818-p TQELKGLSGGEERPE 0.992708464149621 0.663589136998097 -0.00166666666666668 0.0446666666666667 0.0675303423216461 2.43937405163689 -0.00166666666666668 0.0446666666666667 0.984570832348794 0.570246455943806 -0.0202484706442485 0.603970596439435 Q9H6E5 TUT1 Q9H6E5.S818.p_TUT1 Q9H6E5_S818s _1_1_818_818 Q9H6E5 F5H0R1|Q9H6E5 Speckle targeted PIP5K1A-regulated poly(A) polymerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31000.31000.3 15.92 15.92 2.46 5 1 1 0 1003.8325 2929.5104 S818s TMT10 816 (K) GLsGGEERPETEPLLSFVASVSPADR (M) GLS(0.99)GGEERPET(0.0)EPLLS(0.0)FVAS(0.0)VS(0.0)PADR s:Phosphorylated S TUT1 95043.4 1 6 2113.1 97.04 HUMAN 1 -0.0675 2.4394 TQEVDGLSQTDGTLT-p Q8NB49;S445-p TQEVDGLSQTDGTLT 0.218298581818512 0.848420448181924 -0.238333333333333 0.0223333333333333 12.737672796277 1.00231678404645 -0.238333333333333 0.0223333333333333 0.0532393470388774 0.793904605991534 -2.46390266939711 0.274432428813292 Q8NB49 ATP11C Q8NB49.S445.p_ATP11C Q8NB49_S445s _1_1_445_445 Q8NB49 Q8NB49|Q8NB49-4|Q8NB49-3|A0A067XG54|Q8NB49-2 Phospholipid-transporting ATPase IG HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25049.25049.3 23.07 21.05 1.132 7 1 1 0 1111.5653 3252.7243 S445s TMT10 434 (K) YKGVTQEVDGLsQTDGTLTYFDK (V) Y(0.0)KGVT(0.0)QEVDGLS(0.99)QT(0.0)DGT(0.0)LT(0.0)Y(0.0)FDK K:TMT10,s:Phosphorylated S ATP11C 130958.2 7 1 1954.1 105.25 HUMAN 1 -12.7377 1.0023 TQFLDHPSPSSAWME-p Q5T011;S1276-p TQFLDHPSPSSAWME 0.343220967919608 0.0603424692389205 -0.172 -0.249333333333333 8.62402341458378 16.2433069260457 -0.172 -0.249333333333333 0.137276961702866 0.023750311355457 -1.74327975874053 -3.11280716606783 Q5T011 SZT2 Q5T011.S1276.p_SZT2 Q5T011_S1276s _1_1_1276_1276 Q5T011 Q5T011|Q5T011-5 KICSTOR complex protein SZT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20562.20562.3 20.04 20.04 2.546 4 1 1 0 765.6846 2215.0804 S1276s TMT10 1269 (R) TQFLDHPsPSSAWMEPR (Y) T(0.0)QFLDHPS(0.99)PS(0.0)S(0.0)AWMEPR s:Phosphorylated S SZT2 382015.9 1 5 964.1 193.97 HUMAN 1 -8.624 -16.2433 TQFNKGPSYGLSAEV-p B4DUT8;S11-p TQFNKGPSYGLSAEV 0.54964531196757 0.124386429462423 -0.102 -0.173333333333333 4.7972280101394 11.940847962986 -0.102 -0.175711145013806 0.331342541416605 0.0639609939006073 -1.06676462182542 -2.32069583453986 B4DUT8 CNN2 B4DUT8.S11.p_CNN2 B4DUT8_S11s _1_1_11_11 B4DUT8 B4DUT8|Q99439|B4DDF4|Q99439-2|K7ES69 Calponin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20098.20098.3 14.17 14.17 2.999 6 1 1 0 827.4228 2400.2811 S11s Acetyl 2 (M) SSTQFNKGPsYGLSAEVK (N) S(0.0)S(0.0)T(0.0)QFNKGPS(0.99)Y(0.0)GLS(0.0)AEVK K:TMT10,s:Phosphorylated S CNN2 36399.5 1 2 1713.2 119.85 HUMAN 1 -4.7972 -11.9408 TQGGSLQSPPRSPRP-p O95180;S2057-p TQGGSLQSPPRSPRP 0.603894408148596 0.746758308041248 0.104 0.068 4.04326490496925 1.75076776856672 0.104 0.068 0.394160871498819 0.668225774668231 0.925390740630282 0.452821690876839 O95180 CACNA1H O95180.S2057.p_CACNA1H O95180_S2057s _1_1_2057_2057 O95180 O95180|O95180-2|A0A1W2PR14 Voltage-dependent T-type calcium channel subunit alpha-1H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.8208.8208.4 8.25 8.25 2.353 5 1 1 0 607.3276 2346.3203 S2057s TMT10 2044 (K) TPVRPVTQGGSLQsPPRSPR (P) T(0.0)PVRPVT(0.0)QGGS(0.0)LQS(0.99)PPRS(0.0)PR s:Phosphorylated S CACNA1H 262353.2 1 2 5013.1 23.9 HUMAN 1 4.0433 1.7508 TQGVVFESPEESADQ-p Q9H816;S356-p TQGVVFESPEESADQ 0.297184072075513 0.0416366978955391 0.223333333333333 -0.386333333333333 9.92570159124776 18.5036832939788 0.223333333333333 -0.386333333333334 0.101725501804859 0.0141134006558395 1.96880512148882 -3.56190863234648 Q9H816 DCLRE1B Q9H816.S356.p_DCLRE1B Q9H816_S356s _1_1_356_356 Q9H816 Q9H816 5' exonuclease Apollo HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12296.12296.4 19.82 19.82 6.261 5 1 1 0 852.1743 3325.7115 S356s TMT10 349 (R) TQGVVFEsPEESADQSQADRDSKK (A) T(0.0)QGVVFES(0.99)PEES(0.0)ADQS(0.0)QADRDS(0.0)KK K:TMT10,s:Phosphorylated S DCLRE1B 60457.2 1 2 4934.1 24.89 HUMAN 1 9.9257 -18.5037 TQHMKVKSLEDAEKN-p Q9NQC8;S168-p TQHMKVKSLEDAEKN 0.0175426287331743 0.00694150377212655 -0.988666666666667 -0.488333333333333 41.1550594405587 30.9476892708335 -0.988666666666667 -0.488333333333333 7.66468049676805e-05 0.000803953764111207 -10.6889352532208 -6.71463466898314 Q9NQC8 IFT46 Q9NQC8.S168.p_IFT46 Q9NQC8_S168s _1_1_168_168 Q9NQC8 Q9NQC8|E9PR06 Intraflagellar transport protein 46 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12965.12965.3 12.1 12.1 99 1 1 1 0 596.0044 1706.0303 S168s TMT10 166 (K) VKsLEDAEK (N) VKS(1.0)LEDAEK K:TMT10,s:Phosphorylated S IFT46 34456.4 1 1 4161.1 36.42 HUMAN 1 -41.1551 -30.9477 TQIELQSSPDVQNSL-p Q9UK61;S1552-p TQIELQSSPDVQNSL 0.792593719033847 0.798601580015462 0.0456666666666667 -0.0306666666666666 1.94721787588144 1.36634782285623 0.0456666666666666 -0.0306666666666667 0.638672493720475 0.730071201806136 0.497081071427247 -0.363368400008935 Q9UK61 FAM208A Q9UK61.S1552.p_FAM208A Q9UK61_S1551sS1552s_2_2_1551_1552 Q9UK61 Q9UK61 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25474.25474.3 10.93 10.93 4.234 4 2 2 0 959.4568 2716.4405 S1551s S1552s TMT10 1544 (K) NTQIELQssPDVQNSLLEDK (T) NT(0.0)QIELQS(0.99)S(0.99)PDVQNS(0.0)LLEDK K:TMT10,s:Phosphorylated S FAM208A 190568.5 3 23 246.1 411.17 HUMAN 1 1.9472 -1.3663 TQIKGHASAPYFGKE-p Q8N183;S134-p TQIKGHASAPYFGKE 0.958189243566422 0.699046611897101 -0.011 -0.069 0.360087451871405 2.13720834356822 -0.011 -0.069 0.920431037272422 0.611334866303454 -0.104639558054526 -0.538913694849638 Q8N183 NDUFAF2 Q8N183.S134.p_NDUFAF2 Q8N183_S134s _1_1_134_134 Q8N183 Q8N183 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13937.13937.4 15.69 15.69 1.65 6 1 1 0 743.6349 2891.5506 S134s TMT10 131 (K) GHAsAPYFGKEEPSVAPSSTGK (T) GHAS(0.99)APY(0.0)FGKEEPS(0.0)VAPS(0.0)S(0.0)T(0.0)GK K:TMT10,s:Phosphorylated S NDUFAF2 19856 1 3 3443.1 50.92 HUMAN 1 -0.3601 -2.1372 TQKDKMSSPPSSPQK-p Q9Y2H6;S203-p TQKDKMSSPPSSPQK 0.25155486577873 0.675009770198156 -0.222333333333333 -0.046 11.4346368860913 2.33320546452125 -0.222333333333333 -0.046 0.0718681244855764 0.584358618322113 -2.23243710153487 -0.581318802272934 Q9Y2H6 FNDC3A Q9Y2H6.S203.p_FNDC3A Q9Y2H6_S203s _1_1_203_203 Q9Y2H6 Q9Y2H6|Q9Y2H6-2|G5E9X3|A0A087X1M6 Fibronectin type-III domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9453.9668.2 11.19 5.63 1.402 4 1 1 0 792.3989 1503.8241 S203s TMT10 201 (K) MSsPPSSPQK (C) MS(0.0)S(0.99)PPS(0.0)S(0.0)PQK K:TMT10,s:Phosphorylated S FNDC3A 133846.1 12 1 2471.1 82 HUMAN 1 -11.4346 -2.3332 TQKLKEDSEAESTES-p Q5T848;S865-p TQKLKEDSEAESTES 0.731756915583991 0.20428600956528 0.054 -0.159333333333333 2.57163769978079 9.07305870355011 0.054 -0.159333333333333 0.553141483376281 0.123792441852763 0.631978293130551 -1.82034993653928 Q5T848 GPR158 Q5T848.S865.p_GPR158 Q5T848_S865s _1_1_865_865 Q5T848 Q5T848 Probable G-protein coupled receptor 158 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19201.19201.4 13.42 13.42 2.834 4 1 1 0 697.863 2708.4631 S865s TMT10 861 (K) LKEDsEAESTESVPLVCK (S) LKEDS(0.99)EAES(0.0)T(0.0)ES(0.0)VPLVCK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GPR158 136970 1 1 2906.1 66.28 HUMAN 1 2.5716 -9.0731 TQKSQHVSPKIRPVY-p Q6PJP8;S111-p TQKSQHVSPKIRPVY 0.204653309018144 0.00225998172643787 0.281666666666667 -0.818 13.3344756653217 40.9596122291694 0.281666666666667 -0.818 0.0464036810934492 8.01749646440235e-05 2.57151596753739 -10.5715186620264 Q6PJP8 DCLRE1A Q6PJP8.S111.p_DCLRE1A Q6PJP8_S111s _1_1_111_111 Q6PJP8 Q6PJP8 DNA cross-link repair 1A protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4114.4114.3 8.73 5.05 8.734 2 1 1 0 440.9073 1240.7414 S111s TMT10 107 (K) SQHVsPK (I) S(0.0)QHVS(0.99)PK K:TMT10,s:Phosphorylated S DCLRE1A 117995 1 1 2309.1 88.53 HUMAN 1 13.3345 -40.9596 TQLARAFTMDCITLE-p Q9UQE7;T647-p TQLARAFTMDCITLE 0.366525683885644 0.0192839192808007 0.185333333333333 0.446333333333333 8.0914218173254 23.5628458921509 0.185333333333333 0.446333333333333 0.155187886408623 0.00440266266488295 1.65101622891028 4.68334632404205 Q9UQE7 SMC3 Q9UQE7.T647.p_SMC3 Q9UQE7_T647t _1_1_647_647 Q9UQE7 Q9UQE7 Structural maintenance of chromosomes protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21208.21208.3 17.97 17.97 5.983 3 1 1 0 763.6779 2209.0579 T647t TMT10 645 (R) AFtMDCITLEGDQVSHR (G) AFT(0.99)MDCIT(0.0)LEGDQVS(0.0)HR C:Carbamidomethylation,t:Phosphorylated T SMC3 141938.5 1 1 1472.1 139.47 HUMAN 1 8.0914 23.5628 TQLRRSISEQLRDST-p H3BUW7;S17-p TQLRRSISEQLRDST 0.862492352854935 0.12675992441163 -0.0323333333333333 0.247333333333333 1.25468254713637 11.8251726582596 -0.0323333333333333 0.247333333333333 0.749086111875195 0.065687500121262 -0.336596840729364 2.30023487349255 H3BUW7 NotFound H3BUW7.S17.p_NotFound H3BUW7_S17s _1_1_17_17 H3BUW7 H3BUW7 StAR-related lipid transfer protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10914.10914.2 10.92 2.77 2.53 2 1 1 0 571.2944 1061.6152 S17s TMT10 15 (R) SIsEQLR (D) S(0.0)IS(0.99)EQLR s:Phosphorylated S STARD13 7458.5 1 1 6561.1 10.92 HUMAN 1 -1.2547 11.8252 TQNNRCVSAPDLTIE-p Q8NCN4;S339-p TQNNRCVSAPDLTIE 0.0446868387859731 0.000952253650599092 0.578 1.66066666666667 29.9810310768885 59.5544171957066 0.578 1.66066666666667 0.0010043773085074 1.1080472505162e-06 6.42635430391686 23.6690339622193 Q8NCN4 RNF169 Q8NCN4.S339.p_RNF169 Q8NCN4_S339s _1_1_339_339 Q8NCN4 Q8NCN4 E3 ubiquitin-protein ligase RNF169 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20299.20299.2 14.96 14.96 2.788 2 1 1 0 885.9594 1690.945 S339s TMT10 337 (R) CVsAPDLTIEK (R) CVS(0.99)APDLT(0.0)IEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RNF169 78277 3 5 729.1 236.14 HUMAN 1 29.981 59.5544 TQNPRPGSPLRSGQG-p O60673;S1967-p TQNPRPGSPLRSGQG 0.716372991003982 0.218313088271179 -0.074 -0.238 2.7318420425574 8.69754033441346 -0.074 -0.238 0.533108731605903 0.134972709615741 -0.665399485949613 -1.75539819847461 O60673 REV3L O60673.S1967.p_REV3L O60673_S1967s _1_1_1967_1967 O60673 O60673|O60673-2 DNA polymerase zeta catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14962.14962.3 14.3 11 3.404 4 1 1 0 714.0244 2060.0909 S1967s TMT10 1954 (K) TAFSAMTQNPRPGsPLR (S) T(0.0)AFS(0.0)AMT(0.0)QNPRPGS(0.99)PLR s:Phosphorylated S REV3L 356192.6 4 9 524.1 282.7 HUMAN 1 -2.7318 -8.6975 TQNREPESPYGQRLT-p A0A0X1KG68;S587-p TQNREPESPYGQRLT 0.336940767668124 0.0208431447184522 -0.142333333333333 -0.441666666666667 8.8056284602841 22.9916890391056 -0.142333333333333 -0.441666666666667 0.131654938327615 0.00502147258625493 -1.77471686773252 -4.54737235413267 A0A0X1KG68 NotFound A0A0X1KG68.S587.p_NotFound A0A0X1KG68_S587s _1_1_587_587 A0A0X1KG68 A0A0X1KG68|Q5XG87 Non-canonical poly(A) RNA polymerase PAPD7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7207.7207.3 11.94 11.94 4.019 4 1 1 0 915.4112 2664.2634 S587s TMT10 572 (R) IATCNGEQTQNREPEsPYGQR (L) IAT(0.0)CNGEQT(0.0)QNREPES(0.99)PY(0.0)GQR C:Carbamidomethylation,s:Phosphorylated S PAPD7 85104.9 1 2 4137.1 36.83 HUMAN 1 -8.8056 -22.9917 TQNSANPSPSGGDSA-p Q96L73;S979-p TQNSANPSPSGGDSA 0.104117071824167 0.320273560676248 0.342666666666667 0.095 20.7374775657073 6.54031615164312 0.342666666666667 0.095 0.00843824718951799 0.221803494850664 4.03903908868214 1.37992640390448 Q96L73 NSD1 Q96L73.S979.p_NSD1 Q96L73_S975sS979s_2_2_975_979 Q96L73 Q96L73|Q96L73-3|Q96L73-2 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27904.27904.4 13.66 13.66 1.171 9 2 2 0 1080.5295 4158.1882 S975s N977n S979s TMT10 968 (K) KGDGTQNsAnPsPSGGDSALSGELSASLPGLLSDKR (D) KGDGT(0.0)QN(0.0)S(0.99)AN(0.99)PS(0.99)PS(0.0)GGDS(0.0)ALS(0.0)GELS(0.0)AS(0.0)LPGLLS(0.0)DKR K:TMT10,s:Phosphorylated S,n:Deamidated NSD1 302295.2 3 15 601.1 263.26 HUMAN 1 20.7375 6.5403 TQPDVCASPQEKPLR-p Q3T8J9-3;S206-p TQPDVCASPQEKPLR 0.677753010086126 0.0033889360602677 -0.06 -0.612 3.16214699905789 36.936322771038 -0.06 -0.612 0.482820053789717 0.000202473282121989 -0.753158084168099 -8.83513714716707 Q3T8J9 GON4L Q3T8J9.3.S206.p_GON4L Q3T8J9-3_S206s _1_1_206_206 Q3T8J9-3 Q3T8J9|Q3T8J9-3|A0A087WUE6|Q3T8J9-2|A4PB68 Isoform 3 of GON-4-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8116.8116.3 19.67 17.63 16.555 3 1 1 0 781.4066 2262.2367 S206s TMT10 197 (R) KSTQPDVCAsPQEK (P) KS(0.0)T(0.0)QPDVCAS(0.99)PQEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GON4L 250541.8 8 4 291.1 381.52 HUMAN 1 -3.1621 -36.9363 TQPPLSLSPAPETKR-p J3KNL6;S2083-p TQPPLSLSPAPETKR 0.306383440584975 0.253614874155436 0.251 -0.213 9.62464994821018 7.84690961254187 0.251 -0.213 0.109027236741668 0.164175761267128 1.91656654569739 -1.60809237250274 J3KNL6 SEC16A J3KNL6.S2083.p_SEC16A J3KNL6_S2081sS2083s_2_2_2081_2083 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15994.15994.4 7.46 7.46 7.457 5 2 2 0 862.954 3288.8519 S2081s S2083s TMT10 2071 (R) ADSGPTQPPLsLsPAPETKRPGQAAK (K) ADS(0.0)GPT(0.0)QPPLS(0.99)LS(0.99)PAPET(0.0)KRPGQAAK K:TMT10,s:Phosphorylated S SEC16A 253486.5 3 54 15.1 1143.82 HUMAN 1 9.6246 -7.8469 TQPRAHASPFSGALT-p J3KNL6;S122-p TQPRAHASPFSGALT 0.387340319727748 0.534440446557334 0.267666666666667 0.0863333333333333 7.61825456831903 3.66065642499197 0.267666666666667 0.0863333333333334 0.173051171299165 0.430461542414193 1.56885899021584 0.851545827833739 J3KNL6 SEC16A J3KNL6.S122.p_SEC16A J3KNL6_S122s _1_1_122_122 J3KNL6 J3KNL6|F1T0I1 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17212.17212.3 23.14 23.14 1.193 4 1 1 0 834.3994 2421.2182 S122s TMT10 119 (R) AHAsPFSGALTPSAPPGPEMNR (S) AHAS(0.99)PFS(0.0)GALT(0.0)PS(0.0)APPGPEMNR s:Phosphorylated S SEC16A 253486.5 2 5 15.1 1143.82 HUMAN 1 7.6183 3.6607 TQPSINESESDPFEV-p Q76FK4;S329-p TQPSINESESDPFEV 0.378869733037882 0.0130552445119678 -0.122 -0.383333333333333 7.78759481816132 26.2407190856783 -0.122 -0.383333333333333 0.166433412603234 0.00237644677245609 -1.59829102409763 -5.35790932623449 Q76FK4 NOL8 Q76FK4.S329.p_NOL8 Q76FK4_S329s _1_1_329_329 Q76FK4 Q76FK4|Q76FK4-4|Q76FK4-2|F5H101 Nucleolar protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26744.26744.4 19.53 15.57 2.18 5 1 1 0 770.372 2998.5046 S329s TMT10 321 (R) TTQPSINEsESDPFEVVRDDFK (S) T(0.0)T(0.0)QPS(0.0)INES(0.99)ES(0.0)DPFEVVRDDFK K:TMT10,s:Phosphorylated S NOL8 132527 6 2 605.1 262.45 HUMAN 1 -7.7876 -26.2407 TQQQTRISASSATRE-p A0A1B0GTU4;S258-p TQQQTRISASSATRE 0.0871905809717546 0.763807024415839 -0.447 -0.0366666666666666 22.5619698960293 1.61632679525441 -0.447 -0.0366666666666666 0.00554374199920277 0.689234995647286 -4.45163424334938 -0.422006831026185 A0A1B0GTU4 NotFound A0A1B0GTU4.S258.p_NotFound A0A1B0GTU4_S258s _1_1_258_258 A0A1B0GTU4 A0A1B0GTU4|A0A1B0GU60|P49023-3|F5GZ78|P49023-2|P49023-4 Paxillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36278.36278.4 17.05 13.52 1.152 10 1 1 0 960.4881 3758.9635 S258s TMT10 248 (R) VTSTQQQTRIsASSATRELDELMASLSDFK (T) VT(0.0)S(0.0)T(0.0)QQQT(0.0)RIS(0.99)AS(0.0)S(0.0)AT(0.0)RELDELMAS(0.0)LS(0.0)DFK K:TMT10,s:Phosphorylated S PXN 117843.4 17 10 288.1 382.57 HUMAN 1 -22.562 -1.6163 TQRASRRSDSASSEP-p Q05655-2;S302-p TQRASRRSDSASSEP 0.949711389390944 0.715378325256738 -0.01 -0.043 0.443880965643247 2.00068963074775 -0.01 -0.043 0.90284231033728 0.63085716060553 -0.12790622596395 -0.508895666127733 Q05655 PRKCD Q05655.2.S302.p_PRKCD Q05655-2_S302s _1_1_302_302 Q05655-2 Q05655-2 Isoform 2 of Protein kinase C delta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17760.17760.3 21.27 21.27 1.125 5 1 1 0 832.4131 2415.2556 S302s TMT10 301 (R) RsDSASSEPVGIYQGFEK (K) RS(0.99)DS(0.0)AS(0.0)S(0.0)EPVGIY(0.0)QGFEK K:TMT10,s:Phosphorylated S PRKCD 82263.9 5 5 687.1 243.52 HUMAN 1 -0.4439 -2.0007 TQRLSTGSFPEDLLE-p O15085-2;S632-p TQRLSTGSFPEDLLE 0.948131958402904 0.819186357316349 0.00999999999999999 -0.0273333333333333 0.459874924498704 1.21195684207646 0.00999999999999998 -0.0273333333333334 0.899523487162201 0.756491958418984 0.132305158812266 -0.326198793567005 O15085 ARHGEF11 O15085.2.S632.p_ARHGEF11 O15085-2_S632s _1_1_632_632 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29216.29837.3 18.43 18.43 2.192 6 1 1 0 717.0028 2069.0236 S632s TMT10 628 (R) LSTGsFPEDLLESDSSR (S) LS(0.0)T(0.0)GS(0.99)FPEDLLES(0.0)DS(0.0)S(0.0)R s:Phosphorylated S ARHGEF11 173153.4 2 9 228.1 424.05 HUMAN 1 0.4599 -1.212 TQRSVSPSPVPLLFQ-p Q02241-2;S686-p TQRSVSPSPVPLLFQ 0.654307894584067 0.128574380218458 0.0606666666666667 -0.181333333333333 3.45292279137178 11.7477548807332 0.0606666666666667 -0.181333333333333 0.451551948721569 0.066868951250159 0.810995879891196 -2.28655884016452 Q02241 KIF23 Q02241.2.S686.p_KIF23 Q02241-2_S686s _1_1_686_686 Q02241-2 Q02241-2|Q02241-3 Isoform 2 of Kinesin-like protein KIF23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29134.29134.3 17.78 17.78 1.414 3 1 1 0 856.7867 2488.3761 S686s TMT10 682 (R) SVSPsPVPLLFQPDQNAPPIR (L) S(0.0)VS(0.0)PS(0.99)PVPLLFQPDQNAPPIR s:Phosphorylated S KIF23 98902.5 13 21 352.3 350.35 HUMAN 1 3.4529 -11.7478 TQSDIGGSGKSTPSW-p O43166;S1197-p TQSDIGGSGKSTPSW 0.272389658183387 0.426639300867959 -0.172333333333333 0.116333333333333 10.6989820745493 4.92465498336896 -0.172333333333333 0.116333333333333 0.0851337556421146 0.321761813982898 -2.10345327558851 1.09001497668033 O43166 SIPA1L1 O43166.S1197.p_SIPA1L1 O43166_S1197s _1_1_1197_1197 O43166 O43166|O43166-2|O43166-3|F5GYF8 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6772.6772.3 13.42 11.22 2.53 3 1 1 0 577.2897 1649.8859 S1197s TMT10 1188 (R) QNTQSDIGGsGK (S) QNT(0.0)QS(0.0)DIGGS(0.99)GK K:TMT10,s:Phosphorylated S SIPA1L1 201223.1 2 15 46.1 777.88 HUMAN 1 -10.699 4.9247 TQSIPNDSPARGEGT-p Q9NQ92;S66-p TQSIPNDSPARGEGT 0.888804722871773 0.0255119883790317 0.0293333333333333 -0.439666666666667 0.99856178186478 21.6810626786036 0.0293333333333334 -0.439666666666667 0.794591329583545 0.00679037458074495 0.27351762663954 -4.24496981498695 Q9NQ92 COPRS Q9NQ92.S66.p_COPRS Q9NQ92_S66s _1_1_66_66 Q9NQ92 Q9NQ92|H9KV77 Coordinator of PRMT5 and differentiation stimulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6585.6585.2 12.94 12.94 12.938 3 1 1 0 776.3714 1471.7702 S66s TMT10 58 (R) GTQSIPNDsPAR (G) GT(0.0)QS(0.0)IPNDS(0.99)PAR s:Phosphorylated S COPRS 20237.3 1 1 2937.1 65.33 HUMAN 1 0.9986 -21.6811 TQSPSTCSEGLLGWS-p Q9C0C2;S717-p TQSPSTCSEGLLGWS 0.327946143204989 0.0650731732425612 -0.143333333333333 -0.223 9.05612050979732 15.7899775627758 -0.143333333333333 -0.223 0.124276195329887 0.0263634500610235 -1.81807818786938 -3.0258634723561 Q9C0C2 TNKS1BP1 Q9C0C2.S717.p_TNKS1BP1 Q9C0C2_S717s _1_1_717_717 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22271.22271.3 15.43 15.43 2.632 6 1 1 0 840.4017 2439.2226 S717s TMT10 709 (K) DTQSPSTCsEGLLGWSQK (D) DT(0.0)QS(0.0)PS(0.0)T(0.0)CS(0.99)EGLLGWS(0.0)QK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 1 24 4.1 2105.7 HUMAN 1 -9.0561 -15.79 TQSPTPPSPLFSVDF-p Q9HBD1;S808-p TQSPTPPSPLFSVDF 0.908351461676759 0.675636934695264 0.017 -0.0426666666666667 0.821711756282588 2.32674920804675 0.017 -0.0426666666666667 0.827615897550322 0.585227976551335 0.228538701687332 -0.579934303244644 Q9HBD1 RC3H2 Q9HBD1.S808.p_RC3H2 Q9HBD1_S808s _1_1_808_808 Q9HBD1 Q9HBD1|Q9HBD1-4|Q9HBD1-6 Roquin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34743.34743.3 21.3 21.3 3.099 8 1 1 0 1040.8766 3040.6557 S808s TMT10 790 (K) APLVSSTLPVATQSPTPPsPLFSVDFR (A) APLVS(0.0)S(0.0)T(0.0)LPVAT(0.0)QS(0.0)PT(0.0)PPS(0.99)PLFS(0.0)VDFR s:Phosphorylated S RC3H2 132864.3 3 5 1922.1 106.92 HUMAN 1 0.8217 -2.3267 TQSVLDKSLTKSNYQ-p J3QS41;S450-p TQSVLDKSLTKSNYQ 0.8979838206516 0.00507942483656417 -0.0276666666666667 -0.706 0.916825338708371 33.420788922414 -0.0276666666666667 -0.706 0.809687558659268 0.000454905416300558 -0.252882808835551 -7.53054576324355 J3QS41 HELZ J3QS41.S450.p_HELZ J3QS41_S450s _1_1_450_450 J3QS41 J3QS41|P42694|P42694-2|A0A075B6R3 Probable helicase with zinc finger domain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.33085.33085.4 18.8 18.8 1.12 6 1 1 0 816.454 3182.828 S450s TMT10 432 (R) YQIPLSADQLFTQSVLDKsLTK (S) Y(0.0)QIPLS(0.0)ADQLFT(0.0)QS(0.0)VLDKS(0.99)LT(0.0)K K:TMT10,s:Phosphorylated S HELZ 220821.8 1 3 466.1 303.39 HUMAN 1 -0.9168 -33.4208 TQTERNLSPSNSCEP-p A0A0G2JNU3;S1524-p TQTERNLSPSNSCEP 0.971883123534033 0.220751999001096 -0.00966666666666668 -0.133 0.239971378923983 8.63878024884896 -0.00966666666666668 -0.133 0.946243397322291 0.136811301723931 -0.0706112152426266 -1.74523401699895 A0A0G2JNU3 NotFound A0A0G2JNU3.S1524.p_NotFound A0A0G2JNU3_S1524s _1_1_1524_1524 A0A0G2JNU3 A6H8Y1|A0A0G2JNU3|A6H8Y1-6|A6H8Y1-7|A6H8Y1-2 Transcription factor TFIIIB component B'' homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11291.11291.3 17.77 13.23 1.739 5 1 1 0 1028.5149 3003.566 S1524s TMT10 1522 (R) NLsPSNSCEPKEESQSAPVQK (N) NLS(0.99)PS(0.0)NS(0.0)CEPKEES(0.0)QS(0.0)APVQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BDP1 295548.6 2 4 2021.1 102.05 HUMAN 1 -0.24 -8.6388 TQTNWTKSLPLPTPE-p Q5SYE7-2;S150-p TQTNWTKSLPLPTPE 0.522539990450793 0.435703451215071 -0.085 -0.0996666666666666 5.21157899448228 4.80758028756737 -0.085 -0.0996666666666666 0.301191076386667 0.330553660811967 -1.14269350843666 -1.06846633244059 Q5SYE7 NHSL1 Q5SYE7.2.S150.p_NHSL1 Q5SYE7-2_S150s _1_1_150_150 Q5SYE7-2 Q5SYE7|Q5SYE7-2 Isoform 2 of NHS-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21358.21358.2 12.01 12.01 4.104 2 1 1 0 824.9515 1568.93 S150s TMT10 150 (K) sLPLPTPEEK (M) S(0.99)LPLPT(0.0)PEEK K:TMT10,s:Phosphorylated S NHSL1 171957.1 3 1 747.1 232.6 HUMAN 1 -5.2116 -4.8076 TQTPAVLSPSKTQAT-p P46087-4;S765-p TQTPAVLSPSKTQAT 0.274227465067568 0.0014286003693118 0.280666666666667 -1.042 10.6358308672006 45.9624093717428 0.280666666666667 -1.042 0.0863807386218994 2.53372258608734e-05 2.09242566676054 -13.1681346080086 P46087 NOP2 P46087.4.S765.p_NOP2 P46087-4_S765s _1_1_765_765 P46087-4 P46087-4|P46087-2 Isoform 4 of Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13469.13673.4 18.63 18.63 4.601 5 1 1 0 701.8857 2724.5499 S765s TMT10 749 (R) QNAPPKGTDTQTPAVLsPSK (T) QNAPPKGT(0.0)DT(0.0)QT(0.0)PAVLS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S NOP2 93257.6 14 4 1090.1 179.08 HUMAN 1 10.6358 -45.9624 TQVPVVVSPRNQQLH-p P32519;S432-p TQVPVVVSPRNQQLH 0.845323173757714 0.0198762318927469 0.0386666666666667 -0.516666666666667 1.4106395264869 23.3421361546374 0.0386666666666667 -0.516666666666667 0.722663378947686 0.00463219021180168 0.37393170313459 -4.63049093283576 P32519 ELF1 P32519.S432.p_ELF1 P32519_S432s _1_1_432_432 P32519 P32519|P32519-2 ETS-related transcription factor Elf-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20531.20531.3 14.4 14.4 6.005 3 1 1 0 634.3542 1821.0796 S432s TMT10 420 (R) TIQAPTQVPVVVsPR (N) T(0.0)IQAPT(0.0)QVPVVVS(0.99)PR s:Phosphorylated S ELF1 67725 3 7 1950.1 105.53 HUMAN 1 1.4106 -23.3421 TQVQKANSPEKPPEA-p Q9UFC0;S212-p TQVQKANSPEKPPEA 0.536083760046277 0.0451992895632804 -0.0916666666666667 -0.277666666666667 5.0123072778196 17.9967349086796 -0.0916666666666667 -0.277666666666667 0.31533289081284 0.0158608518705556 -1.10631300824944 -3.45877357016038 Q9UFC0 LRWD1 Q9UFC0.S212.p_LRWD1 Q9UFC0_S212s _1_1_212_212 Q9UFC0 Q9UFC0 Leucine-rich repeat and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5464.5464.3 16.68 16.68 99 1 1 1 0 842.1248 2444.3977 S212s TMT10 210 (K) ANsPEKPPEAGAAHKPR (A) ANS(1.0)PEKPPEAGAAHKPR K:TMT10,s:Phosphorylated S LRWD1 72115.1 6 1 1514.1 134.66 HUMAN 1 -5.0123 -17.9967 TQVVKGSSPLGPAGL-p O43482;S48-p TQVVKGSSPLGPAGL 0.330228871732743 0.32163967416171 0.153333333333333 0.108333333333333 8.99416138808285 6.51248155176868 0.153333333333333 0.108333333333333 0.126061903681599 0.223229632776846 1.80735212139473 1.37502198920754 O43482 OIP5 O43482.S48.p_OIP5 O43482_S48s _1_1_48_48 O43482 O43482 Protein Mis18-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.31130.31130.2 22.41 22.41 1.125 3 1 1 0 1589.7939 3098.6108 S48s TMT10 46 (K) GSsPLGPAGLGAEEPAAGPQLPSWLQPER (C) GS(0.0)S(0.99)PLGPAGLGAEEPAAGPQLPS(0.0)WLQPER s:Phosphorylated S OIP5 25204.5 5 3 2455.1 82.73 HUMAN 1 8.9942 6.5125 TRAAPALTPPDRLVL-p P05129;T655-p TRAAPALTPPDRLVL 0.808269800911761 0.0688463156663482 0.077 0.382333333333333 1.77531556030544 15.455997037955 0.077 0.382333333333333 0.664459391238316 0.0284708410161264 0.45844839798535 2.96241374899003 P05129 PRKCG P05129.T655.p_PRKCG P05129_T655t_1_1_655_655 P05129 P05129|P05129-2 Protein kinase C gamma type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.34733.34733.4 12.53 12.53 2.371 4 1 1 0 1084.5457 4254.1821 T655t N677n TMT10 650 (R) AAPALtPPDRLVLASIDQADFQGFTYVnPDFVHPDAR (S) AAPALT(0.99)PPDRLVLAS(0.0)IDQADFQGFT(0.0)Y(0.0)VN(1.0)PDFVHPDAR t:Phosphorylated T,n:Deamidated PRKCG 79701.6 1 2 2439.2 83.37 HUMAN 1 1.7753 15.456 TRALKKLSEVNKRLQ-p Q8NCF5;S220-p TRALKKLSEVNKRLQ 0.12910296062371 0.00447746295441537 -0.447333333333333 -0.743333333333333 18.4139494007037 34.4912532577267 -0.447333333333333 -0.743333333333333 0.0144080451228691 0.000355528707687566 -3.54653048131707 -7.90879181527016 Q8NCF5 NFATC2IP Q8NCF5.S220.p_NFATC2IP Q8NCF5_S220s _1_1_220_220 Q8NCF5 Q8NCF5 NFATC2-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11374.11374.3 8.46 8.46 99 1 1 1 0 528.9828 1504.9666 S220s TMT10 218 (K) KLsEVNK (R) KLS(1.0)EVNK K:TMT10,s:Phosphorylated S NFATC2IP 45987.1 1 7 477.1 300.69 HUMAN 1 -18.4139 -34.4913 TRAQKKLSCSLEDLR-p Q8ND30;S385-p TRAQKKLSCSLEDLR 0.0525315331631904 0.00700852614468418 -0.638666666666667 -0.51 27.801016163329 30.8764086868894 -0.638666666666667 -0.51 0.00165919864229747 0.000817257907420412 -5.78999319554003 -6.69225074187569 Q8ND30 PPFIBP2 Q8ND30.S385.p_PPFIBP2 Q8ND30_S385sS387s_2_2_385_387 Q8ND30 Q8ND30|Q8ND30-2|Q8ND30-3|E9PP16 Liprin-beta-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17453.17453.4 8.91 5.11 8.3 4 2 2 0 679.093 2553.4161 S385s S387s TMT10 383 (K) KLsCsLEDLRSESVDK (C) KLS(0.99)CS(0.99)LEDLRS(0.0)ES(0.0)VDK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PPFIBP2 99112.4 3 7 1287.1 158.1 HUMAN 1 -27.801 -30.8764 TRASDPQSPPQVSRH-p Q7L7X3;S421-p TRASDPQSPPQVSRH 0.980753251188804 0.22336170141388 0.00366666666666667 -0.131 0.167231954746496 8.57492683366107 0.00366666666666667 -0.131 0.962225372691812 0.138837669995327 0.0495935976019765 -1.73418791611752 Q7L7X3 TAOK1 Q7L7X3.S421.p_TAOK1 Q7L7X3_S421s _1_1_421_421 Q7L7X3 Q7L7X3|Q7L7X3-3|Q7L7X3-2 Serine/threonine-protein kinase TAO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6365.6568.3 15.62 13.19 5.157 3 1 1 0 526.5889 1497.7859 S421s TMT10 416 (R) ASDPQsPPQVSR (H) AS(0.0)DPQS(0.99)PPQVS(0.0)R s:Phosphorylated S TAOK1 116524.7 4 3 1125.1 174.76 HUMAN 1 0.1672 -8.5749 TRASPPRSPAEPKGS-p Q5T0Z8;S279-p TRASPPRSPAEPKGS 0.0990612726298986 0.0025028014201708 -0.411333333333333 -0.750333333333333 21.2368167004886 39.7884877256784 -0.411333333333333 -0.750333333333333 0.00752174021878758 0.000104990795768953 -4.14955650623336 -10.0366298980197 Q5T0Z8 C6orf132 Q5T0Z8.S279.p_C6orf132 Q5T0Z8_S275sS279s_2_2_275_279 Q5T0Z8 Q5T0Z8 Uncharacterized protein C6orf132 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6478.6478.4 9.01 6.13 2.276 3 2 2 0 603.553 2251.2559 S275s S279s TMT10 268 (R) QAEATRAsPPRsPAEPK (G) QAEAT(0.0)RAS(0.99)PPRS(0.99)PAEPK K:TMT10,s:Phosphorylated S C6orf132 124488.2 1 21 336.1 355.09 HUMAN 1 -21.2368 -39.7885 TRDGRRDSSDTTPLL-p E9PCW1;S49-p TRDGRRDSSDTTPLL 0.319686857587658 0.0860838567046744 0.142333333333333 0.353666666666667 9.27309952479611 14.0986420198192 0.142333333333333 0.353666666666667 0.118219752970269 0.0389166813176944 1.85564857477841 2.70940814431038 E9PCW1 GOSR1 E9PCW1.S49.p_GOSR1 E9PCW1_S49s _1_1_49_49 E9PCW1 E9PCW1|B4DQA8 Golgi SNAP receptor complex member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7776.7776.2 15.22 15.22 1.224 6 1 1 0 964.9207 1848.8682 S49s Hydrogen 47 (R) RDsSDTTPLLNGSSQDR (M) RDS(0.99)S(0.0)DT(0.0)T(0.0)PLLNGS(0.0)S(0.0)QDR s:Phosphorylated S GOSR1 28406.9 13 2 2289.1 89.56 HUMAN 1 9.2731 14.0986 TRDISLDSELHDLRL-p Q15643;S467-p TRDISLDSELHDLRL 0.457955481063929 0.0079720206564708 0.128 -0.645333333333333 6.25251019734405 29.9188746563313 0.128 -0.645333333333333 0.237000346121508 0.00101885535960805 1.32942412559514 -6.39737476574728 Q15643 TRIP11 Q15643.S467.p_TRIP11 Q15643_S467s _1_1_467_467 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16884.16884.3 7.78 2.66 7.199 2 1 1 0 574.6156 1641.8645 S467s TMT10 462 (R) DISLDsELHDLR (L) DIS(0.0)LDS(0.99)ELHDLR s:Phosphorylated S TRIP11 228267 1 6 463.1 303.86 HUMAN 1 6.2525 -29.9189 TRDQMVGSHMDLVDT-p Q14678;S529-p TRDQMVGSHMDLVDT 0.670964106589316 0.0615870424439535 0.0916666666666667 0.294 3.24562363449586 16.1187444041211 0.0916666666666667 0.294 0.473628291618723 0.0244413707902454 0.769874575000073 3.08882111467899 Q14678 KANK1 Q14678.S529.p_KANK1 Q14678_S529s _1_1_529_529 Q14678 Q14678|Q14678-2 KN motif and ankyrin repeat domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22653.22653.4 12.58 12.58 3.54 7 1 1 0 1045.4681 4098.8951 S529s TMT10 524 (R) DQMVGsHMDLVDTCVGTSVETNSVGISCQPECK (N) DQMVGS(0.99)HMDLVDT(0.0)CVGT(0.0)S(0.0)VET(0.0)NS(0.0)VGIS(0.0)CQPECK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KANK1 149112.3 1 3 2363.1 86.5 HUMAN 1 3.2456 16.1187 TREEPVLTLVDEAIV-p Q02156;T710-p TREEPVLTLVDEAIV 0.893810515246054 0.024383892319854 -0.02 0.335333333333333 0.952872778843888 21.9726651063449 -0.02 0.335333333333333 0.802994780056687 0.00634941172105899 -0.262014921983218 4.3111297309829 Q02156 PRKCE Q02156.T710.p_PRKCE Q02156_T710t _1_1_710_710 Q02156 Q02156 Protein kinase C epsilon type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.35364.35364.5 20.84 17.46 8.046 2 1 1 0 689.7526 3364.7677 T710t TMT10 694 (R) DVNNFDQDFTREEPVLtLVDEAIVK (Q) DVNNFDQDFT(0.0)REEPVLT(0.99)LVDEAIVK K:TMT10,t:Phosphorylated T PRKCE 85041.6 15 6 1089.1 179.15 HUMAN 1 -0.9529 21.9727 TREPVAESPKKKRWE-p A0A087WUE4;S351-p TREPVAESPKKKRWE 0.728963070362327 0.11219674479053 -0.05 -0.208 2.60765874929186 12.5346022674188 -0.05 -0.208 0.548572616823514 0.0557878691063818 -0.639531129819751 -2.42625849856178 A0A087WUE4 LENG8 A0A087WUE4.S351.p_LENG8 A0A087WUE4_S351s _1_1_351_351 A0A087WUE4 A0A087WUE4|C9JMY0|Q96PV6-2|A0A087WTE7 Leukocyte receptor cluster member 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25827.25827.4 16.37 9.44 4.647 6 1 1 0 938.4865 3670.9481 S351s TMT10 325 (R) LQDGSAYTIDWSREPLPGLTREPVAEsPK (K) LQDGS(0.0)AY(0.0)T(0.0)IDWS(0.0)REPLPGLT(0.0)REPVAES(0.99)PK K:TMT10,s:Phosphorylated S LENG8 96627.7 24 1 2104.1 97.57 HUMAN 1 -2.6077 -12.5346 TRESTQLSPADLTEG-p Q08J23;S456-p TRESTQLSPADLTEG 0.195954837597201 0.00964139024199053 -0.370666666666667 0.472333333333333 13.8003243605826 28.4176662366202 -0.370666666666667 0.472333333333333 0.0416838249999282 0.00143957195160669 -2.6563303816075 5.95598139064914 Q08J23 NSUN2 Q08J23.S456.p_NSUN2 Q08J23_S456s _1_1_456_456 Q08J23 Q08J23|Q08J23-2|Q08J23-3 tRNA (cytosine(34)-C(5))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17330.17330.3 15.98 10.09 1.753 6 1 1 0 956.8349 2788.5183 S456s TMT10 451 (R) ESTQLsPADLTEGKPTDPSK (L) ES(0.0)T(0.0)QLS(0.99)PADLT(0.0)EGKPT(0.0)DPS(0.0)K K:TMT10,s:Phosphorylated S NSUN2 87267.9 4 2 1957.1 105.19 HUMAN 1 -13.8003 28.4177 TREYRSQSPVRSMDE-p Q6P3S6;S393-p TREYRSQSPVRSMDE 0.873065962113256 0.619505293556752 0.044 0.0706666666666667 1.15378080243703 2.82651859386365 0.044 0.0706666666666667 0.766693744359111 0.521612680479429 0.312020010122663 0.684857510530205 Q6P3S6 FBXO42 Q6P3S6.S393.p_FBXO42 Q6P3S6_S393s_1_1_393_393 Q6P3S6 Q6P3S6 F-box only protein 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6061.6061.3 7.04 7.04 1.138 3 1 1 0 738.9995 2119.0222 S393s M398m TMT10 391 (R) SQsPVRSmDEAPCVNGR (W) S(0.0)QS(0.99)PVRS(0.0)M(1.0)DEAPCVNGR C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine FBXO42 78579.1 1 2 2098.1 97.69 HUMAN 1 1.1538 2.8265 TRFQAEASEKDSSSM-p Q9UNF1;S19-p TRFQAEASEKDSSSM 0.791634956034985 0.0253754209709607 -0.04 0.299333333333333 1.95851969666079 21.7143369699129 -0.04 0.299333333333333 0.637012611210902 0.00673854763892381 -0.49959620821959 4.25248760966952 Q9UNF1 MAGED2 Q9UNF1.S19.p_MAGED2 Q9UNF1_S19s_1_1_19_19 Q9UNF1 Q9UNF1|Q9UNF1-2|Q5H909|Q5H907 Melanoma-associated antigen D2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.34663.34663.4 8.59 8.59 1.136 8 1 1 0 1049.2815 4113.1339 S19s N36n TMT10 14 (R) FQAEAsEKDSSSMMQTLLTVTQnVEVPETPK (A) FQAEAS(0.99)EKDS(0.0)S(0.0)S(0.0)MMQT(0.0)LLT(0.0)VT(0.0)QN(1.0)VEVPET(0.0)PK K:TMT10,s:Phosphorylated S,n:Deamidated MAGED2 65124.3 2 2 893.1 204.33 HUMAN 1 -1.9585 21.7143 TRFTTRRSQSPINCI-p Q96E09;S187-p TRFTTRRSQSPINCI 0.323241986848319 0.118997028456588 0.137666666666667 0.167666666666667 9.18048274166004 12.1916024963764 0.137666666666667 0.167666666666667 0.120767958756829 0.0603725820431258 1.839609908589 2.3651639683606 Q96E09 FAM122A Q96E09.S187.p_FAM122A Q96E09_S187sS189s_2_2_187_189 Q96E09 Q96E09 Protein FAM122A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24242.24242.3 14.31 14.31 14.307 3 2 2 0 752.3776 2095.1895 S187s S189s Hydrogen 187 (R) sQsPINCIRPSVLGPLK (R) S(0.99)QS(0.99)PINCIRPS(0.0)VLGPLK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S FAM122A 30813.8 1 14 509.1 287.77 HUMAN 1 9.1805 12.1916 TRGQDEASAGGIWGF-p Q96M27-3;S209-p TRGQDEASAGGIWGF 0.583840571093275 0.299194645292065 0.072 -0.114333333333333 4.30059756182619 6.91910868887875 0.072 -0.114333333333333 0.371484111708858 0.203277415837406 0.974170435927372 -1.44645105548957 Q96M27 PRRC1 Q96M27.3.S209.p_PRRC1 Q96M27-3_S209s _1_1_209_209 Q96M27-3 Q96M27-2|Q96M27-3|Q96M27-5|Q96M27-4 Isoform 3 of Protein PRRC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.31095.31095.3 17.13 17.13 99 1 1 1 0 692.0182 1994.0747 S209s TMT10 204 (R) GQDEAsAGGIWGFIK (G) GQDEAS(1.0)AGGIWGFIK K:TMT10,s:Phosphorylated S PRRC1 48962.9 1 1 3034.1 62.55 HUMAN 1 4.3006 -6.9191 TRGQPVLTPPDQLVI-p P17252;T638-p TRGQPVLTPPDQLVI 0.743332697084522 0.49686047046344 -0.0706666666666667 0.155333333333333 2.44809393717799 4.06326492771616 -0.0706666666666667 0.155333333333333 0.569102647899585 0.392349864742924 -0.605898061399174 0.929044396689125 P17252 PRKCA P17252.T638.p_PRKCA P17252_T638t_1_1_638_638 P17252 P17252 Protein kinase C alpha type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.37495.37495.4 19.27 19.27 0.578 5 1 1 0 1173.3375 4609.3816 T638t N647n TMT10 633 (R) GQPVLtPPDQLVIAnIDQSDFEGFSYVNPQFVHPILQSAV (-) GQPVLT(0.99)PPDQLVIAN(0.50)IDQS(0.0)DFEGFS(0.0)Y(0.0)VN(0.50)PQFVHPILQS(0.0)AV t:Phosphorylated T,n:Deamidated PRKCA 77889.6 1 9 2439.1 83.37 HUMAN 1 -2.4481 4.0633 TRGRQRATPDAPPAD-p Q6Y2X3;T635-p TRGRQRATPDAPPAD 0.819508098620105 0.112532895650988 -0.042 -0.179 1.66467324799974 12.5136205290504 -0.042 -0.179 0.681604854994119 0.056058044901674 -0.433190840642148 -2.42251198000225 Q6Y2X3 DNAJC14 Q6Y2X3.T635.p_DNAJC14 Q6Y2X3_T635t _1_1_635_635 Q6Y2X3 Q6Y2X3 DnaJ homolog subfamily C member 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21941.21941.3 13.15 13.15 8.889 2 1 1 0 769.7178 2227.1669 T635t TMT10 632 (R) QRAtPDAPPADLQDFLSR (I) QRAT(0.99)PDAPPADLQDFLS(0.0)R t:Phosphorylated T DNAJC14 79480.2 1 3 4306.1 33.98 HUMAN 1 -1.6647 -12.5136 TRGVGYETILKEQKG-p A0A0C4DFY5;T371-p TRGVGYETILKEQKG 0.342559001712462 0.136415482961744 0.176 -0.195 8.64326505633887 11.398852369752 0.176 -0.195 0.136670094391606 0.0724627418753881 1.74661085970404 -2.22509297190293 A0A0C4DFY5 GPRC5C A0A0C4DFY5.T371.p_GPRC5C A0A0C4DFY5_T371t _1_1_371_371 A0A0C4DFY5 A0A0C4DFY5|Q9NQ84-2|J9JIE0 G-protein-coupled receptor family C group 5 member C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20533.20533.2 12.88 12.88 8.149 2 1 1 0 759.4225 1437.8717 T371t TMT10 366 (R) GVGYEtILK (E) GVGY(0.0)ET(0.99)ILK K:TMT10,t:Phosphorylated T GPRC5C 53504 1 2 1470.1 139.57 HUMAN 1 8.6433 -11.3989 TRHMRSHTGERPYKC-p Q92766;T1535-p TRHMRSHTGERPYKC 0.175126391202982 0.00123561176676881 -0.241333333333333 -1.141 15.0626572948428 47.5866771784427 -0.241333333333333 -1.141 0.0311698182920404 1.74314005360602e-05 -2.89021088248853 -14.1329952160887 Q92766 RREB1 Q92766.T1535.p_RREB1 Q92766_T1535t _1_1_1535_1535 Q92766 Q92766-2|Q9Y467|E7EW59|D3YTK1|Q92766-4 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3681.3681.3 10.42 7.95 2.34 3 1 1 0 538.2803 1532.8585 T1535t TMT10 1533 (R) SHtGERPYK (C) S(0.0)HT(0.99)GERPY(0.0)K K:TMT10,t:Phosphorylated T RREB1 184269.8 2 28 179.1 480.48 HUMAN 1 -15.0627 -47.5867 TRHQRTHTGERPNAC-p Q6DD87;T89-p TRHQRTHTGERPNAC 0.201774620661792 0.00448895401922663 -0.234 -0.787333333333333 13.5005838664994 34.4506317564832 -0.234 -0.787333333333333 0.0446623543942731 0.00035886972703543 -2.60167284968261 -7.89414624430589 Q6DD87 ZNF787 Q6DD87.T89.p_ZNF787 Q6DD87_T89t _1_1_89_89 Q6DD87 Q6DD87|A0A087WUD1 Zinc finger protein 787 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3943.3943.3 15.35 15.35 2.474 2 1 1 0 738.0068 2132.0377 T89t TMT10 87 (R) THtGERPNACADCGK (T) T(0.0)HT(0.99)GERPNACADCGK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ZNF787 41569.7 1 2 3245.1 56.11 HUMAN 1 -13.5006 -34.4506 TRHQRVHSGEKPFVC-p Q14592;S275-p TRHQRVHSGEKPFVC 0.775461946756303 0.0386745972221711 -0.106333333333333 -0.575 2.11518025239258 18.9742164164768 -0.106333333333333 -0.575 0.614443528914623 0.0126642174328837 -0.534161095991019 -3.65898032946189 Q14592 ZNF460 Q14592.S275.p_ZNF460 Q14592_S275s _1_1_275_275 Q14592 Q14592|Q14592-2 Zinc finger protein 460 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11177.11177.4 11.35 11.35 99 1 1 1 0 629.5646 2435.2778 S275s TMT10 273 (R) VHsGEKPFVCNECGK (A) VHS(1.0)GEKPFVCNECGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF460 65261.4 1 62 240.8 415.72 HUMAN 1 -2.1152 -18.9742 TRHSQPATPTPLQSR-p Q9NR12;T251-p TRHSQPATPTPLQSR 0.101218422745456 0.954390382888144 0.304333333333333 0.0106666666666667 21.0408531482964 0.288896610510872 0.304333333333333 0.0106666666666667 0.00786891193941767 0.935643358013068 4.10597533124771 0.0845630844381813 Q9NR12 PDLIM7 Q9NR12.T251.p_PDLIM7 Q9NR12_T251t _1_1_251_251 Q9NR12 Q9NR12|Q9NR12-2 PDZ and LIM domain protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5313.5313.3 9.58 9.58 2.676 4 1 1 0 576.9591 1648.8968 T251t TMT10 246 (R) HSQPAtPTPLQSR (T) HS(0.0)QPAT(0.99)PT(0.0)PLQS(0.0)R t:Phosphorylated T PDLIM7 50927.8 1 5 3139.1 59.65 HUMAN 1 21.0409 0.2889 TRIIGEDSPSRLDRG-p Q9Y618;S1259-p TRIIGEDSPSRLDRG 0.77434107246085 0.150625662954583 -0.0713333333333333 -0.196 2.12555782404642 10.8130970955998 -0.0713333333333333 -0.196 0.612977054031924 0.082925918482924 -0.536431610060534 -2.12245856213955 Q9Y618 NCOR2 Q9Y618.S1259.p_NCOR2 Q9Y618_S1259s _1_1_1259_1259 Q9Y618 Q9Y618|Q9Y618-3|C9JFD3|Q9Y618-4|C9J0Q5|Q9Y618-5 Nuclear receptor corepressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13386.13386.5 14.72 9.74 1.786 3 1 1 0 556.4988 2698.4888 S1259s TMT10 1254 (R) IIGEDsPSRLDRGREDSLPK (G) IIGEDS(0.99)PS(0.0)RLDRGREDS(0.0)LPK K:TMT10,s:Phosphorylated S NCOR2 275540.8 4 18 16.1 1053.89 HUMAN 1 -2.1256 -10.8131 TRIIYGGSVTGATCK-p P60174;S249-p TRIIYGGSVTGATCK 0.819486223186259 0.0485550427345472 0.041 0.277666666666667 1.66500646042791 17.5683304232447 0.041 0.277666666666667 0.68155256086983 0.0175051951895369 0.433267389103319 3.37274636537745 P60174 TPI1 P60174.S249.p_TPI1 P60174_S249s _1_1_249_249 P60174 P60174|P60174-1|P60174-4 Triosephosphate isomerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19054.19054.2 17.13 12.98 2.293 4 1 1 0 932.9868 1784.9981 S249s TMT10 244 (R) IIYGGsVTGATCK (E) IIY(0.0)GGS(0.99)VT(0.0)GAT(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TPI1 31075.7 2 6 1065.1 181.63 HUMAN 1 1.665 17.5683 TRILFFNTPKKMTDY-p R4GMR5;T232-p TRILFFNTPKKMTDY 0.121424171475698 0.0496915219721712 -0.535333333333333 0.370666666666667 19.0407540860316 17.4368796308698 -0.535333333333334 0.370666666666667 0.0124716694395145 0.0180431365935825 -3.67604288040239 3.34655117905839 R4GMR5 NotFound R4GMR5.T232.p_NotFound R4GMR5_T232t _1_1_232_232 R4GMR5 P48556|R4GMR5|K7EJC1 26S proteasome non-ATPase regulatory subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25069.25069.3 8.68 8.68 99 1 1 1 0 625.7101 1795.1449 T232t TMT10 227 (R) ILFFNtPKK (M) ILFFNT(1.0)PKK K:TMT10,t:Phosphorylated T PSMD8 32722.1 4 4 3400.1 51.99 HUMAN 1 -19.0408 17.4369 TRISGDLSSEEERFM-p Q9NSI6-2;S418-p TRISGDLSSEEERFM 0.582450308953824 0.315645583703282 -0.115 -0.105666666666667 4.32147293303258 6.6168959403625 -0.115 -0.105666666666667 0.369702771836785 0.21792668166122 -0.978101968951333 -1.39340766076097 Q9NSI6 BRWD1 Q9NSI6.2.S418.p_BRWD1 Q9NSI6-2_S418s _1_1_418_418 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19977.19977.4 13.41 11.52 1.217 3 1 1 0 655.847 2540.3997 S418s TMT10 413 (R) ISGDLsSEEERFMKPK (V) IS(0.0)GDLS(0.99)S(0.0)EEERFMKPK K:TMT10,s:Phosphorylated S BRWD1 259915.1 1 3 208.1 444.81 HUMAN 1 -4.3215 -6.6169 TRKCVGASQECKKEA-p Q8IWI9-4;S2190-p TRKCVGASQECKKEA 0.181776097173604 0.263319909715508 -0.293666666666667 -0.126 14.580506958136 7.63495668844177 -0.293666666666667 -0.126 0.0348296655498133 0.172386928283934 -2.80013889468527 -1.57128926480239 Q8IWI9 MGA Q8IWI9.4.S2190.p_MGA Q8IWI9-4_S2190s _1_1_2190_2190 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3|Q8IWI9-2 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6955.6955.3 10.28 10.28 99 1 1 1 0 645.3332 1854.0181 S2190s TMT10 2186 (K) CVGAsQECKK (E) CVGAS(1.0)QECKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MGA 338321.5 1 18 141.1 523.06 HUMAN 1 -14.5805 -7.635 TRKDLGSTEDGDGTD-p Q15527;T184-p TRKDLGSTEDGDGTD 0.844695210620492 0.0418576763287362 -0.0286666666666667 0.287333333333333 1.41561123601862 18.4700439293131 -0.0286666666666667 0.287333333333333 0.72183656285352 0.014223144002003 -0.375109446786947 3.55501899284929 Q15527 SURF2 Q15527.T184.p_SURF2 Q15527_T184t _1_1_184_184 Q15527 Q15527 Surfeit locus protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20629.20629.3 13.69 11.69 1.559 4 1 1 0 1057.1569 3089.4889 T184t TMT10 180 (K) DLGStEDGDGTDDFLTDKEDEK (A) DLGS(0.0)T(0.99)EDGDGT(0.0)DDFLT(0.0)DKEDEK K:TMT10,t:Phosphorylated T SURF2 30103.5 3 3 1281.1 158.83 HUMAN 1 -1.4156 18.47 TRKKTVPSDVDS___-p Q9H6H4;S253-p TRKKTVPSDVDS___ 0.837362833844556 0.0467536667111663 0.0493333333333333 -0.256 1.49098460736368 17.7941492481339 0.0493333333333333 -0.256 0.709416914825031 0.0166182418536993 0.392874096457881 -3.41796631894277 Q9H6H4 REEP4 Q9H6H4.S253.p_REEP4 Q9H6H4_S253sS257s_2_2_253_257 Q9H6H4 Q9H6H4 Receptor expression-enhancing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9638.9638.3 12.14 12.14 6.009 3 2 2 0 641.6666 1763.0518 S253s S257s TMT10 248 (R) KKTVPsDVDs (-) KKT(0.0)VPS(0.99)DVDS(0.99) K:TMT10,s:Phosphorylated S REEP4 29565.8 8 9 1742.1 118.21 HUMAN 1 1.491 -17.7941 TRKRVYLSDSDNNSL-p Q9NSI6-2;S1605-p TRKRVYLSDSDNNSL 0.534390357489892 0.966795771256058 0.0853333333333333 -0.00499999999999997 5.03857734863668 0.207625711504738 0.0853333333333333 -0.00499999999999998 0.313431228660762 0.953317200222275 1.11112294380219 -0.0612990639563365 Q9NSI6 BRWD1 Q9NSI6.2.S1605.p_BRWD1 Q9NSI6-2_S1605sS1607s_2_2_1605_1607 Q9NSI6-2 Q9NSI6|Q9NSI6-2|Q9NSI6-3 Isoform B of Bromodomain and WD repeat-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25774.25774.2 13.83 11.14 3.315 5 2 2 0 1193.5421 2226.1339 S1605s S1607s Hydrogen 1602 (R) VYLsDsDNNSLETGEILK (A) VY(0.0)LS(0.99)DS(0.99)DNNS(0.0)LET(0.0)GEILK K:TMT10-Lys-Only,s:Phosphorylated S BRWD1 259915.1 8 30 208.1 444.81 HUMAN 1 5.0386 -0.2076 TRLEPVYSPPGSPPP-p O75676;S343-p TRLEPVYSPPGSPPP 0.151198103969209 0.901720853058777 0.240666666666667 0.0143333333333333 16.5309393092901 0.626430221774636 0.240666666666667 0.0143333333333333 0.0222282907638892 0.865679190306346 3.17081171224916 0.177338534446078 O75676 RPS6KA4 O75676.S343.p_RPS6KA4 O75676_S343sS347s_2_2_343_347 O75676 O75676|O75676-2|E9PJN1 Ribosomal protein S6 kinase alpha-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34199.34199.4 14.27 10.17 2.275 5 2 2 0 937.1799 3585.7699 S343s S347s TMT10 324 (R) SELDVGNFAEEFTRLEPVYsPPGsPPPGDPR (I) S(0.0)ELDVGNFAEEFT(0.0)RLEPVY(0.0)S(0.99)PPGS(0.99)PPPGDPR s:Phosphorylated S RPS6KA4 86174.8 6 7 1564.1 131.32 HUMAN 1 16.5309 0.6264 TRLERKLSDGHKSRS-p Q8NFC6;S1017-p TRLERKLSDGHKSRS 0.0933084416341688 0.00490145194864417 0.436 1.15533333333333 21.8884148787595 33.7088849895884 0.436 1.15533333333333 0.00647378857923755 0.000425707695568704 4.2964591740438 7.63078826901629 Q8NFC6 BOD1L1 Q8NFC6.S1017.p_BOD1L1 Q8NFC6_S1017s _1_1_1017_1017 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5658.5658.3 8.55 8.55 99 1 1 1 0 517.9672 1471.92 S1017s TMT10 1015 (R) KLsDGHK (S) KLS(1.0)DGHK K:TMT10,s:Phosphorylated S BOD1L1 332628.7 1 13 97.1 603.4 HUMAN 1 21.8884 33.7089 TRLHRRVSEVEAVLS-p O14578-4;S480-p TRLHRRVSEVEAVLS 0.490692853704506 0.466968209406038 -0.111 0.0896666666666667 5.69501563178153 4.40909287791359 -0.111 0.0896666666666667 0.269462563343033 0.362318668948611 -1.2300366728614 0.994382612332402 O14578 CIT O14578.4.S480.p_CIT O14578-4_S480s _1_1_480_480 O14578-4 O14578-4|O14578-3 Isoform 4 of Citron Rho-interacting kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22301.22301.3 15.87 15.87 12.734 2 1 1 0 628.3523 1803.074 S480s TMT10 478 (R) RVsEVEAVLSQK (E) RVS(0.99)EVEAVLS(0.0)QK K:TMT10,s:Phosphorylated S CIT 238656.7 1 8 366.1 342.11 HUMAN 1 -5.695 4.4091 TRLLSRASPATPAGH-p Q9HCM7;S790-p TRLLSRASPATPAGH 0.932699613389369 0.0972841337777854 -0.015 -0.181 0.597157189529554 13.380423306997 -0.015 -0.181 0.871533893070559 0.0459153256970271 -0.16953467193201 -2.57838403515233 Q9HCM7 FBRSL1 Q9HCM7.S790.p_FBRSL1 Q9HCM7_S790s _1_1_790_790 Q9HCM7 Q9HCM7 Fibrosin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17545.17545.3 14.38 14.38 1.396 3 1 1 0 651.691 1873.0857 S790s TMT10 789 (R) AsPATPAGHPVSGLLLR (A) AS(0.99)PAT(0.0)PAGHPVS(0.0)GLLLR s:Phosphorylated S FBRSL1 111247 6 6 716.1 237.81 HUMAN 1 -0.5972 -13.3804 TRLRKAQSMMSLSAS-p J3KNU2;S268-p TRLRKAQSMMSLSAS 0.273316345910785 0.298626723945236 0.174333333333333 0.102 10.6675296364319 6.92940593369979 0.174333333333333 0.102 0.0857525486088265 0.20279601028203 2.0979601864102 1.44825426918467 J3KNU2 NotFound J3KNU2.S268.p_NotFound J3KNU2_S268s _1_1_268_268 J3KNU2 J3KNU2 F-box only protein 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22905.22905.3 14.49 10.91 2.358 5 1 1 0 659.3418 1896.0335 S268s TMT10 266 (K) AQsMMSLSASSPLK (V) AQS(0.99)MMS(0.0)LS(0.0)AS(0.0)S(0.0)PLK K:TMT10,s:Phosphorylated S FBXO16 37143.1 1 2 5091.1 23.1 HUMAN 1 10.6675 6.9294 TRLRRHASLDGASPY-p A0A140LJL2;S319-p TRLRRHASLDGASPY 0.463568003496396 0.996201534701095 -0.0993333333333333 -0.000666666666666667 6.1592893415271 0.0230393695368758 -0.0993333333333333 -0.000666666666666659 0.24214252446281 0.994709035835173 -1.31289042601726 -0.00694246850859135 A0A140LJL2 NotFound A0A140LJL2.S319.p_NotFound A0A140LJL2_S319s _1_1_319_319 A0A140LJL2 A0A140LJL2|Q8N350|Q8N350-4 Voltage-dependent calcium channel beta subunit-associated regulatory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15446.15675.3 15.93 15.93 3.477 3 1 1 0 610.9774 1750.9528 S319s TMT10 317 (R) HAsLDGASPYFK (V) HAS(0.99)LDGAS(0.0)PY(0.0)FK K:TMT10,s:Phosphorylated S CBARP 76276.7 8 1 1993.1 103.67 HUMAN 1 -6.1593 -0.023 TRLSRSRTASLTSAA-p Q9UN36;T330-p TRLSRSRTASLTSAA 0.714354134547226 0.536997621761965 0.0561666666666667 0.0645 2.75415786101604 3.63409562386757 0.0561666666666667 0.0645 0.530376427775059 0.433102247690161 0.670020807860739 0.846372887943103 Q9UN36 NDRG2 Q9UN36.T330.p_NDRG2 Q9UN36_T330tS332s_2_2_330_332 Q9UN36 Q9UN36|Q9UN36-6|Q9UN36-3|Q9UN36-2|A0A0A0MS87|Q9UN36-5|Q9UN36-4|G3V578 Protein NDRG2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9567.9567.2 11.81 11.81 2.919 5 2 2 0 755.3041 1349.6655 T330t S332s Hydrogen 330 (R) tAsLTSAASVDGNR (S) T(0.99)AS(0.99)LT(0.0)S(0.0)AAS(0.0)VDGNR t:Phosphorylated T,s:Phosphorylated S NDRG2 41139.8 7 6 2649.1 75.22 HUMAN 2 2.7542 3.6341 TRLVEVDSGRQIEYE-p P20700;S232-p TRLVEVDSGRQIEYE 0.637336806031996 0.220295201112098 -0.0643333333333333 -0.129666666666667 3.64899918488283 8.64964169079104 -0.0643333333333334 -0.129666666666667 0.431618530216825 0.136469572445153 -0.849411254015683 -1.74711285584606 P20700 LMNB1 P20700.S232.p_LMNB1 P20700_S232s _1_1_232_232 P20700 P20700|E9PBF6|A0A0D9SFE5 Lamin-B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19067.19067.3 17.15 17.15 17.149 3 1 1 0 789.4062 2286.2382 S232s TMT10 227 (R) LVEVDsGRQIEYEYK (L) LVEVDS(0.99)GRQIEY(0.0)EY(0.0)K K:TMT10,s:Phosphorylated S LMNB1 66692.5 2 5 440.1 312.01 HUMAN 1 -3.649 -8.6496 TRLWAPDSPNRSFTE-p Q9Y263;S50-p TRLWAPDSPNRSFTE 0.263812127853958 0.966311152678281 -0.162333333333333 -0.00499999999999999 10.9826029228648 0.212003286593383 -0.162333333333333 -0.00499999999999999 0.079751655632852 0.952356765480338 -2.15306179678846 -0.0625621384405224 Q9Y263 PLAA Q9Y263.S50.p_PLAA Q9Y263_S50s _1_1_50_50 Q9Y263 Q9Y263|E5RIM3 Phospholipase A-2-activating protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16716.16716.2 9.76 9.76 99 1 1 1 0 682.8313 1284.6898 S50s TMT10 45 (R) LWAPDsPNR (S) LWAPDS(1.0)PNR s:Phosphorylated S PLAA 88696 2 1 4648.1 28.36 HUMAN 1 -10.9826 -0.212 TRLWTHPSDLTIALS-p Q9Y4D2;S587-p TRLWTHPSDLTIALS 0.153700218451723 0.191436371106944 0.305666666666667 0.143333333333333 16.3432846236736 9.44409024590999 0.305666666666667 0.143333333333333 0.0232098074551141 0.113655635699016 3.13438513082018 1.88455462818142 Q9Y4D2 DAGLA Q9Y4D2.S587.p_DAGLA Q9Y4D2_S587s _1_1_587_587 Q9Y4D2 Q9Y4D2 Sn1-specific diacylglycerol lipase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33224.33224.3 17.07 17.07 2.83 7 1 1 0 934.827 2722.4766 S587s TMT10 582 (R) LWTHPsDLTIALSASTPLYPPGR (I) LWT(0.0)HPS(0.99)DLT(0.0)IALS(0.0)AS(0.0)T(0.0)PLY(0.0)PPGR s:Phosphorylated S DAGLA 116490.4 1 2 1490.1 137.27 HUMAN 1 16.3433 9.4441 TRMKAENSHNAGQVD-p Q8IWZ3-6;S198-p TRMKAENSHNAGQVD 0.300478673172259 0.00387443643379497 -0.174333333333333 -0.724666666666667 9.81154477804945 35.6600140965112 -0.174333333333333 -0.724666666666667 0.104434868010622 0.000271643045172166 -1.94898718324898 -8.34038955137206 Q8IWZ3 ANKHD1 Q8IWZ3.6.S198.p_ANKHD1 Q8IWZ3-6_S198s _1_1_198_198 Q8IWZ3-6 Q8IWZ3-6|Q8IWZ3-4|Q8IWZ3-2|Q8IWZ3-3 Isoform 6 of Ankyrin repeat and KH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4532.4532.3 15.7 10.63 5.533 2 1 1 0 732.6933 2116.097 S198s TMT10 193 (R) MKAENsHNAGQVDTR (S) MKAENS(0.99)HNAGQVDT(0.0)R K:TMT10,s:Phosphorylated S ANKHD1 279224.1 1 26 287.1 383.69 HUMAN 1 -9.8115 -35.66 TRNLLLASPRTIKVA-p Q13470-2;S255-p TRNLLLASPRTIKVA 0.412701107430887 0.201760659722071 0.121333333333333 -0.156 7.09050183648683 9.14591112701147 0.121333333333333 -0.156 0.195411364075236 0.121733157628307 1.47684596840538 -1.83295275044059 Q13470 TNK1 Q13470.2.S255.p_TNK1 Q13470-2_S255s _1_1_255_255 Q13470-2 Q13470|Q13470-2 Isoform 2 of Non-receptor tyrosine-protein kinase TNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18036.18036.2 11.31 11.31 99 1 1 1 0 596.8364 1112.6989 S255s TMT10 250 (R) NLLLAsPR (T) NLLLAS(1.0)PR s:Phosphorylated S TNK1 72548.5 1 2 1259.1 161.29 HUMAN 1 7.0905 -9.1459 TRNNLSASMFDLSMK-p A0A1B0GTL5;S176-p TRNNLSASMFDLSMK 0.229977783899196 0.0312577537776141 0.219666666666667 0.688666666666667 12.2698907025995 20.3309395320173 0.219666666666667 0.688666666666667 0.0592940246715745 0.00926629339112148 2.38029916940027 3.9465650485626 A0A1B0GTL5 NotFound A0A1B0GTL5.S176.p_NotFound A0A1B0GTL5_S176s _1_1_176_176 A0A1B0GTL5 A0A1B0GTL5|Q9BXF6 Rab11 family-interacting protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28258.28258.3 16.34 12.72 3.417 3 1 1 0 665.9943 1916.0022 S176s TMT10 171 (R) NNLSAsMFDLSMK (D) NNLS(0.0)AS(0.99)MFDLS(0.0)MK K:TMT10,s:Phosphorylated S RAB11FIP5 139038.8 2 2 714.1 238.09 HUMAN 1 12.2699 20.3309 TRNQIPRTPENLITE-p Q7Z4H7;T584-p TRNQIPRTPENLITE 0.481533495886899 0.841973143306114 0.107 0.0293333333333334 5.84053056380682 1.05034362713328 0.107 0.0293333333333334 0.260583518392523 0.785173506812743 1.25610285521384 0.286430948420082 Q7Z4H7 HAUS6 Q7Z4H7.T584.p_HAUS6 Q7Z4H7_T584t _1_1_584_584 Q7Z4H7 Q7Z4H7|Q7Z4H7-3|Q5VY60 HAUS augmin-like complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20505.20505.3 11.73 8.28 2.446 2 1 1 0 701.7102 2023.1498 T584t TMT10 579 (R) NQIPRtPENLITEIR (S) NQIPRT(0.99)PENLIT(0.0)EIR t:Phosphorylated T HAUS6 109703.4 2 6 1302.1 156.27 HUMAN 1 5.8405 1.0503 TRNVEPQSGDL____-p Q8TEQ0;S810-p TRNVEPQSGDL____ 0.684824732088841 0.222151082181479 0.0713333333333333 -0.137333333333333 3.08412472753775 8.60460741388317 0.0713333333333333 -0.137333333333333 0.4915724412016 0.137892059664681 0.737447791959415 -1.73932253698795 Q8TEQ0 SNX29 Q8TEQ0.S810.p_SNX29 Q8TEQ0_S810s _1_1_810_810 Q8TEQ0 Q8TEQ0 Sorting nexin-29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13592.13592.2 11.82 11.82 99 1 1 1 0 634.2921 1187.6105 S810s TMT10 805 (R) NVEPQsGDL (-) NVEPQS(1.0)GDL s:Phosphorylated S SNX29 91651.5 1 9 764.1 229.17 HUMAN 1 3.0841 -8.6046 TRNVSTGSAENEEKS-p O60271;S332-p TRNVSTGSAENEEKS 0.179935774950283 0.0206743632343323 -0.647666666666667 0.436333333333333 14.6976597849608 23.0498554615025 -0.647666666666667 0.436333333333333 0.0339026793015512 0.00495466680265477 -2.82193700624382 4.56110039356951 O60271 SPAG9 O60271.S332.p_SPAG9 O60271_S332s _1_1_332_332 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-9|O60271-3|O60271-5 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7259.7259.2 16.65 16.65 2.177 3 1 1 0 901.933 1722.891 S332s TMT10 327 (R) NVSTGsAENEEK (S) NVS(0.0)T(0.0)GS(0.99)AENEEK K:TMT10,s:Phosphorylated S SPAG9 147001.6 3 25 84.1 629.25 HUMAN 1 -14.6977 23.0499 TRPGLELSPEEGPPY-p Q8TE68;S409-p TRPGLELSPEEGPPY 0.146674740935683 0.959405803169618 -0.293666666666667 -0.00700000000000001 16.9390204024128 0.259133746765548 -0.293666666666667 -0.00700000000000003 0.0202347554372725 0.942077486611475 -3.25063397235871 -0.0760883768185808 Q8TE68 EPS8L1 Q8TE68.S409.p_EPS8L1 Q8TE68_S409s _1_1_409_409 Q8TE68 Q8TE68|B4DKV7|Q8TE68-2|Q8TE68-3|K7EN83|Q8TE68-4|K7EKX9|K7ELW3 Epidermal growth factor receptor kinase substrate 8-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34971.34971.4 19.03 13.04 1.293 9 1 1 0 1371.1462 5401.5916 S409s TMT10 390 (R) ENELWTSLGDSWTRPGLELsPEEGPPYRPEFFSGWEPPVTDPQSR (A) ENELWT(0.0)S(0.0)LGDS(0.0)WT(0.0)RPGLELS(0.99)PEEGPPY(0.0)RPEFFS(0.0)GWEPPVT(0.0)DPQS(0.0)R s:Phosphorylated S EPS8L1 80534.9 3 7 326.1 361.27 HUMAN 1 -16.939 -0.2591 TRPPTDLSFNFDANK-p E7EVB6;S427-p TRPPTDLSFNFDANK 0.154754532748189 0.262600243524549 -0.327 -0.174333333333333 16.2774437503821 7.65034064302123 -0.327 -0.174333333333333 0.023564358697586 0.171777364665821 -3.1216452652811 -1.57396247000678 E7EVB6 DTNB E7EVB6.S427.p_DTNB E7EVB6_S427s _1_1_427_427 E7EVB6 O60941|E7EVB6 Dystrobrevin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.25006.25006.4 8.53 8.53 5.041 3 1 1 0 747.3847 2906.5412 S427s TMT10 412 (R) LAAEAGNVTRPPTDLsFNFDANK (Q) LAAEAGNVT(0.0)RPPT(0.0)DLS(0.99)FNFDANK K:TMT10,s:Phosphorylated S DTNB 71367.3 1 4 792.3 224.62 HUMAN 1 -16.2774 -7.6503 TRPSRPASYKKAIDE-p Q9UKE5;S795-p TRPSRPASYKKAIDE 0.31256981829013 0.312769302025798 -0.323 -0.409 9.44980796326468 6.67186179867824 -0.323 -0.409 0.113506100479507 0.215185904577406 -1.88626025258592 -1.40307344350421 Q9UKE5 TNIK Q9UKE5.S795.p_TNIK Q9UKE5_S795s _1_1_795_795 Q9UKE5 Q9UKE5|Q9UKE5-2|Q9UKE5-3|Q9UKE5-5 TRAF2 and NCK-interacting protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7247.7247.5 9.3 9.3 1.771 4 1 1 0 458.0655 2206.3275 S795s TMT10 786 (R) DITRPSRPAsYKK (A) DIT(0.0)RPS(0.0)RPAS(0.99)Y(0.0)KK K:TMT10,s:Phosphorylated S TNIK 155453.9 2 41 131.1 535.29 HUMAN 1 -9.4498 -6.6719 TRPVRVFSQENVCDR-p Q6NV74;S113-p TRPVRVFSQENVCDR 0.410572564475443 0.856126258619921 0.189666666666667 0.0253333333333334 7.13012202813671 0.950898535782364 0.189666666666667 0.0253333333333334 0.193636755509403 0.803359893435515 1.4837717169429 0.261490495174973 Q6NV74 KIAA1211L Q6NV74.S113.p_KIAA1211L Q6NV74_S113s _1_1_113_113 Q6NV74 Q6NV74 Uncharacterized protein KIAA1211-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12960.12960.2 14.63 5.74 99 1 1 1 0 781.8473 1482.7208 S113s TMT10 111 (R) VFsQENVCDR (I) VFS(1.0)QENVCDR C:Carbamidomethylation,s:Phosphorylated S KIAA1211L 102725.9 5 4 756.1 230.87 HUMAN 1 7.1301 0.9509 TRQAHDLSPAAESSS-p O95425-2;S221-p TRQAHDLSPAAESSS 0.719995318616615 0.755077531245582 0.066 -0.0373333333333333 2.69276928990675 1.68639300158194 0.066 -0.0373333333333333 0.537926662815608 0.678204551180401 0.65728827754152 -0.438126226164319 O95425 SVIL O95425.2.S221.p_SVIL O95425-2_S221s _1_1_221_221 O95425-2 O95425|O95425-3|O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14866.14866.3 21.01 21.01 6.925 7 1 1 0 797.6987 2311.1152 S221s TMT10 216 (R) QAHDLsPAAESSSTFSFSGR (D) QAHDLS(0.99)PAAES(0.0)S(0.0)S(0.0)T(0.0)FS(0.0)FS(0.0)GR s:Phosphorylated S SVIL 202384.1 4 3 406.2 324.74 HUMAN 1 2.6928 -1.6864 TRQTPVDSPDDSTLS-p P23443-2;S371-p TRQTPVDSPDDSTLS 0.365376551445853 0.367715431166097 -0.122666666666667 0.106333333333333 8.12096955985144 5.76249892824571 -0.122666666666667 0.106333333333333 0.154135630765565 0.265307854264706 -1.65613930154162 1.24185225556494 P23443 RPS6KB1 P23443.2.S371.p_RPS6KB1 P23443-2_S371s _1_1_371_371 P23443-2 P23443|P23443-2|P23443-5|P23443-3|P23443-4 Isoform Alpha II of Ribosomal protein S6 kinase beta-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.37236.37236.5 18.75 18.75 1.653 10 1 1 0 854.0291 4186.1484 S371s TMT10 366 (R) QTPVDsPDDSTLSESANQVFLGFTYVAPSVLESVK (E) QT(0.0)PVDS(0.99)PDDS(0.0)T(0.0)LS(0.0)ES(0.0)ANQVFLGFT(0.0)Y(0.0)VAPS(0.0)VLES(0.0)VK K:TMT10,s:Phosphorylated S RPS6KB1 56530.6 8 3 1663.1 122.57 HUMAN 1 -8.121 5.7625 TRQTPVDSPDDTALS-p Q9UBS0;S370-p TRQTPVDSPDDTALS 0.00891066188781077 0.000952253650599092 -1.79866666666667 -1.38266666666667 49.3951825667319 53.9975970199827 -1.79866666666667 -1.38266666666667 1.14942792327785e-05 3.98327506828277e-06 -15.3332990780927 -18.6465096890913 Q9UBS0 RPS6KB2 Q9UBS0.S370.p_RPS6KB2 Q9UBS0_S370s _1_1_370_370 Q9UBS0 Q9UBS0 Ribosomal protein S6 kinase beta-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.37193.37193.4 26.63 25.2 1.113 9 1 1 0 1056.2771 4142.1222 S370s TMT10 365 (R) QTPVDsPDDTALSESANQAFLGFTYVAPSVLDSIK (E) QT(0.0)PVDS(0.99)PDDT(0.0)ALS(0.0)ES(0.0)ANQAFLGFT(0.0)Y(0.0)VAPS(0.0)VLDS(0.0)IK K:TMT10,s:Phosphorylated S RPS6KB2 53853.6 6 2 2936.1 65.41 HUMAN 1 -49.3952 -53.9976 TRRDLNESPVKSFVS-p Q96RL1;S677-p TRRDLNESPVKSFVS 0.812230969912692 0.249718270837093 0.034 0.12 1.73743856688841 7.93879292869357 0.034 0.12 0.670279818380014 0.1607387945831 0.449837539961704 1.62403037765514 Q96RL1 UIMC1 Q96RL1.S677.p_UIMC1 Q96RL1_S677s _1_1_677_677 Q96RL1 Q96RL1|Q96RL1-3|Q96RL1-2|Q96RL1-4 BRCA1-A complex subunit RAP80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11344.11344.2 11.39 7.7 99 1 1 1 0 720.3821 1359.7884 S677s TMT10 673 (R) DLNEsPVK (S) DLNES(1.0)PVK K:TMT10,s:Phosphorylated S UIMC1 80924.2 4 17 339.1 354.34 HUMAN 1 1.7374 7.9388 TRRDRLGSYSGPTSV-p Q9BZ23;S189-p TRRDRLGSYSGPTSV 0.118247488683981 0.0365581831254084 -0.294333333333333 -0.310333333333333 19.2869247152323 19.335223238235 -0.294333333333333 -0.310333333333333 0.0117844014396694 0.0116540714445307 -3.72756033106542 -3.73436513397104 Q9BZ23 PANK2 Q9BZ23.S189.p_PANK2 Q9BZ23_S189s _1_1_189_189 Q9BZ23 Q9BZ23|Q9BZ23-4|Q9BZ23-3|V9GYZ0 Pantothenate kinase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9131.9131.3 13.96 13.96 2.291 6 1 1 0 597.626 1710.8972 S189s TMT10 185 (R) DRLGsYSGPTSVSR (Q) DRLGS(0.99)Y(0.0)S(0.0)GPT(0.0)S(0.0)VS(0.0)R s:Phosphorylated S PANK2 63307.1 4 4 1896.1 108.52 HUMAN 1 -19.2869 -19.3352 TRRGLRDSHSSEEDE-p Q5JTV8;S154-p TRRGLRDSHSSEEDE 0.600598442473182 0.271963275976824 0.0716666666666667 0.106666666666667 4.09025440146482 7.44800995939057 0.0716666666666667 0.106666666666667 0.389919145284062 0.17996953894492 0.934342959197558 1.53877648725301 Q5JTV8 TOR1AIP1 Q5JTV8.S154.p_TOR1AIP1 Q5JTV8_S154sS156sS157s_3_3_154_157 Q5JTV8 J3KN66|Q5JTV8-3|A0A0A0MSK5|Q5JTV8-2 Torsin-1A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14323.14323.3 16.33 16.33 3.834 9 3 3 0 1178.5226 3293.6497 S154s S156s S157s Hydrogen 150 (R) GLRDsHssEEDEASSQTDLSQTISKK (T) GLRDS(0.99)HS(0.99)S(0.99)EEDEAS(0.0)S(0.0)QT(0.0)DLS(0.0)QT(0.0)IS(0.0)KK K:TMT10-Lys-Only,s:Phosphorylated S TOR1AIP1 66418.4 44 20 585.1 265.22 HUMAN 1 4.0903 7.448 TRRIKQGSPNGYAVL-p Q8NDT2;S787-p TRRIKQGSPNGYAVL 0.964791470427455 0.411555328884481 0.00666666666666666 0.0823333333333334 0.301390240954428 5.12969462713996 0.00666666666666666 0.0823333333333334 0.93295560008587 0.306923779333717 0.0881134514105543 1.12754012773256 Q8NDT2 RBM15B Q8NDT2.S787.p_RBM15B Q8NDT2_S787s _1_1_787_787 Q8NDT2 Q8NDT2|Q8NDT2-2 Putative RNA-binding protein 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30684.30684.3 23.4 23.4 5.581 7 1 1 0 1236.2866 3626.8686 S787s TMT10 785 (K) QGsPNGYAVLLATQATPSGLGTEGMPTVEPGLQR (R) Q(0.0)GS(0.99)PN(0.0)GY(0.0)AVLLAT(0.0)QAT(0.0)PS(0.0)GLGT(0.0)EGM(0.0)PT(0.0)VEPGLQR s:Phosphorylated S RBM15B 97489 4 17 199.1 454.11 HUMAN 1 0.3014 5.1297 TRRISLASPRQLFKA-p P50851;S2201-p TRRISLASPRQLFKA 0.717179227515211 0.568152275295938 -0.0586666666666667 0.101666666666667 2.7240673782386 3.30901798656597 -0.0586666666666667 0.101666666666667 0.534063948340942 0.466764911840573 -0.663787535463961 0.782391422731641 P50851 LRBA P50851.S2201.p_LRBA P50851_S2201s _1_1_2201_2201 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13705.13705.2 7.98 1.59 2.813 2 1 1 0 526.79 972.6039 S2201s TMT10 2197 (R) ISLAsPR (Q) IS(0.0)LAS(0.99)PR s:Phosphorylated S LRBA 321783.7 5 27 74.1 649.16 HUMAN 1 -2.7241 3.309 TRRKLMPSPLKGQHT-p Q8NI77;S674-p TRRKLMPSPLKGQHT 0.266142547410633 0.00140014198002876 0.405333333333333 -0.963666666666667 10.8957922523652 46.2305629346938 0.405333333333333 -0.963666666666667 0.0813618424649439 2.38201069192211e-05 2.13786282893962 -13.3229887581788 Q8NI77 KIF18A Q8NI77.S674.p_KIF18A Q8NI77_S674s _1_1_674_674 Q8NI77 Q8NI77 Kinesin-like protein KIF18A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17455.17455.4 13.33 13.33 4.328 2 1 1 0 555.0762 2137.3134 S674s TMT10 671 (K) LMPsPLKGQHTLK (S) LMPS(0.99)PLKGQHT(0.0)LK K:TMT10,s:Phosphorylated S KIF18A 103477.4 9 3 2753.1 71.77 HUMAN 1 10.8958 -46.2306 TRRQDTRSPTSAPTQ-p Q63HR2-4;S941-p TRRQDTRSPTSAPTQ 0.500902815636366 0.0368200010402739 0.095 0.335 5.5347814040034 19.2875042736728 0.095 0.335 0.279590145179187 0.011782828936698 1.20121979667927 3.72435440635588 Q63HR2 TNS2 Q63HR2.4.S941.p_TNS2 Q63HR2-4_S941s _1_1_941_941 Q63HR2-4 Q63HR2-4|Q63HR2-6 Isoform 4 of Tensin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3749.3749.3 12.61 12.61 1.282 5 1 1 0 585.2857 1673.8768 S941s TMT10 937 (R) QDTRsPTSAPTQR (L) QDT(0.0)RS(0.99)PT(0.0)S(0.0)APT(0.0)QR s:Phosphorylated S TNS2 155500.6 3 9 453.1 308.04 HUMAN 1 5.5348 19.2875 TRRRKGLSEDVSISK-p Q15029;S944-p TRRRKGLSEDVSISK 0.19125129866069 0.232919094154321 -0.223333333333333 -0.121 14.027417593437 8.33345792430672 -0.223333333333333 -0.121 0.0395601783306545 0.146775715980722 -2.69795379627313 -1.69240270986846 Q15029 EFTUD2 Q15029.S944.p_EFTUD2 Q15029_S944s _1_1_944_944 Q15029 Q15029|Q15029-3|Q15029-2 116 kDa U5 small nuclear ribonucleoprotein component HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17668.17668.2 15.33 15.33 4.583 3 1 1 0 786.9187 1492.8623 S944s TMT10 942 (K) GLsEDVSISK (F) GLS(0.99)EDVS(0.0)IS(0.0)K K:TMT10,s:Phosphorylated S EFTUD2 110403.7 3 3 1913.1 107.79 HUMAN 1 -14.0274 -8.3335 TRRRRAPSVANVGSH-p P21333-2;S2144-p TRRRRAPSVANVGSH 0.0868192866229433 0.0144832167858916 -0.428333333333333 0.449 22.6601385773668 25.4860523318702 -0.428333333333333 0.449 0.00541983596178231 0.00282744891350525 -4.47454088156863 5.16133576963097 P21333 FLNA P21333.2.S2144.p_FLNA P21333-2_S2144s _1_1_2144_2144 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17114.17114.3 15.31 15.31 2.446 3 1 1 0 731.7089 2113.1476 S2144s TMT10 2142 (R) APsVANVGSHCDLSLK (I) APS(0.99)VANVGS(0.0)HCDLS(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FLNA 282751.6 6 16 198.1 454.47 HUMAN 1 -22.6601 25.4861 TRRRRGGSGYHSRSP-p Q9UQ35;S1818-p TRRRRGGSGYHSRSP 0.623892094178248 0.0367367574403206 0.0703333333333333 0.377 3.80639726735346 19.3044333602911 0.0703333333333333 0.377 0.416255776385181 0.0117369880922777 0.87993654390318 3.72790425469015 Q9UQ35 SRRM2 Q9UQ35.S1818.p_SRRM2 Q9UQ35_S1818s _1_1_1818_1818 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3005.3005.3 11.19 11.19 4.458 3 1 1 0 377.1712 1049.5326 S1818s TMT10 1816 (R) GGsGYHSR (S) GGS(0.99)GY(0.0)HS(0.0)R s:Phosphorylated S SRRM2 300351.7 3 115 2.1 3310.34 HUMAN 1 3.8064 19.3044 TRRRRRASQEANLLT-p A0A1C7CYX1;S461-p TRRRRRASQEANLLT 0.879481914454382 0.386499094135372 0.0233333333333333 0.0843333333333334 1.09777266259179 5.48813739689646 0.0233333333333333 0.0843333333333334 0.77664532746258 0.282609176988284 0.298227002202645 1.1925460788802 A0A1C7CYX1 NotFound A0A1C7CYX1.S461.p_NotFound A0A1C7CYX1_S461s _1_1_461_461 A0A1C7CYX1 A0A1C7CYX1|Q6PJG2 ELM2 and SANT domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18312.18535.3 15.25 15.25 9.099 2 1 1 0 618.0024 1772.0228 S461s Hydrogen 459 (R) RAsQEANLLTLAQK (A) RAS(0.99)QEANLLT(0.0)LAQK K:TMT10-Lys-Only,s:Phosphorylated S ELMSAN1 121244.8 17 1 548.1 275.48 HUMAN 1 1.0978 5.4881 TRRRRSPSPAPPPRR-p A9Z1X7;S571-p TRRRRSPSPAPPPRR 0.321266030442159 0.0156364534360917 0.178 0.538 9.23315233000898 24.9640136148926 0.178 0.538 0.119312176168892 0.0031885896973178 1.84873042465574 5.02840399300928 A9Z1X7 NotFound A9Z1X7.S571.p_NotFound A9Z1X7_S571s _1_1_571_571 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4003.4003.3 9.97 3.26 1.247 2 1 1 0 457.5768 1290.748 S571s TMT10 569 (R) SPsPAPPPRR (R) S(0.0)PS(0.99)PAPPPRR s:Phosphorylated S SRRM1 103445.7 1 23 8.1 1346.57 HUMAN 1 9.2332 24.964 TRRSRFHSPSTTWSP-p Q99590;S796-p TRRSRFHSPSTTWSP 0.420320976430283 0.0192358120846332 0.114 0.452333333333333 6.94616379230346 23.5768614042873 0.114 0.452333333333334 0.202015001362963 0.00438847733355359 1.45158614047208 4.68671614941829 Q99590 SCAF11 Q99590.S796.p_SCAF11 Q99590_S796s _1_1_796_796 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10067.10067.3 18.47 15.5 4.761 6 1 1 0 875.7641 2545.3087 S796s Hydrogen 794 (R) FHsPSTTWSPNKDTPQEK (K) FHS(0.99)PS(0.0)T(0.0)T(0.0)WS(0.0)PNKDT(0.0)PQEK K:TMT10-Lys-Only,s:Phosphorylated S SCAF11 166418 25 16 120.1 549.85 HUMAN 1 6.9462 23.5769 TRRTRTFSATVRASQ-p Q9Y2V2;S52-p TRRTRTFSATVRASQ 0.560051792492857 0.409796310019284 -0.0813333333333333 -0.0883333333333333 4.6459665855372 5.1543918415172 -0.0813333333333334 -0.0883333333333334 0.34308627245836 0.30518333586323 -1.03876088110266 -1.13204256083135 Q9Y2V2 CARHSP1 Q9Y2V2.S52.p_CARHSP1 Q9Y2V2_S52s _1_1_52_52 Q9Y2V2 Q9Y2V2|I3L3X8 Calcium-regulated heat-stable protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12052.12052.2 10.19 4.34 2.259 3 1 1 0 545.7787 1010.5832 S52s TMT10 50 (R) TFsATVR (A) T(0.0)FS(0.99)AT(0.0)VR s:Phosphorylated S CARHSP1 16120 19 6 1307.1 155.77 HUMAN 1 -4.646 -5.1544 TRRYREASPLSSNKL-p Q9Y462-3;S505-p TRRYREASPLSSNKL 0.128346533857537 0.739323618181647 -0.272666666666667 0.0453333333333333 18.465335275921 1.80960348774501 -0.272666666666667 0.0453333333333334 0.0142385732042752 0.659234080779827 -3.55706002504616 0.466159688011988 Q9Y462 ZNF711 Q9Y462.3.S505.p_ZNF711 Q9Y462-3_S505s _1_1_505_505 Q9Y462-3 Q9Y462-3|Q9Y462-2 Isoform 3 of Zinc finger protein 711 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8209.8209.3 10.15 6.35 1.121 4 1 1 0 597.3132 1709.9587 S505s TMT10 501 (R) YREAsPLSSNK (L) Y(0.0)REAS(0.99)PLS(0.0)S(0.0)NK K:TMT10,s:Phosphorylated S ZNF711 92780.5 3 4 2932.2 65.64 HUMAN 1 -18.4653 1.8096 TRSARRRTTQIINIT-p Q14980;T1811-p TRSARRRTTQIINIT 0.892228666049809 0.13016385753973 0.0213333333333333 -0.202666666666667 0.968664684278285 11.6701367145185 0.0213333333333333 -0.202666666666667 0.800080216102421 0.0680747928628652 0.265999717880285 -2.27286140771806 Q14980 NUMA1 Q14980.T1811.p_NUMA1 Q14980_T1811tT1812t_2_2_1811_1812 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17914.17914.3 10.82 10.82 10.818 4 2 2 0 732.0593 2034.2258 T1811t T1812t TMT10 1809 (R) RRttQIINITMTK (K) RRT(0.99)T(0.99)QIINIT(0.0)MT(0.0)K K:TMT10,t:Phosphorylated T NUMA1 239339.3 1 45 31.1 900.97 HUMAN 1 0.9687 -11.6701 TRSEALSSVLDQEEA-p Q12888-2;S645-p TRSEALSSVLDQEEA 0.451712086772319 0.00575422933881225 -0.309333333333333 0.735 6.37266918863307 32.4053728869622 -0.309333333333333 0.735 0.230532988964791 0.00057472847031293 -1.35069064752682 7.18607610462947 Q12888 TP53BP1 Q12888.2.S645.p_TP53BP1 Q12888-2_S645s _1_1_645_645 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.27791.27791.3 13.88 13.88 1.109 3 1 1 0 806.4025 2337.226 S645s TMT10 640 (R) SEALSsVLDQEEAMEIK (E) S(0.0)EALS(0.0)S(0.99)VLDQEEAMEIK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 4 31 3.1 2297.07 HUMAN 1 -6.3727 32.4054 TRSFFSNTFGRSGEQ-p Q8NEV8;T465-p TRSFFSNTFGRSGEQ 0.554346998867521 0.73499299521194 -0.0913333333333333 0.038 4.73121572622193 1.84383861363908 -0.0913333333333334 0.038 0.336417382435412 0.65405781416692 -1.05456353483502 0.473880889384847 Q8NEV8 EXPH5 Q8NEV8.T465.p_EXPH5 Q8NEV8_T465t _1_1_465_465 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21020.21020.2 14.01 14.01 2.625 3 1 1 0 686.3188 1291.6633 T465t TMT10 460 (R) SFFSNtFGR (S) S(0.0)FFS(0.0)NT(0.99)FGR t:Phosphorylated T EXPH5 223884.5 1 5 129.1 537.25 HUMAN 1 -4.7312 1.8438 TRSGAQASSTPLSPT-p P02545;S17-p TRSGAQASSTPLSPT 0.601430288310894 0.0363875753989236 0.087 -0.268 4.07840186971014 19.3651871947859 0.087 -0.268 0.390984745101577 0.0115739414363466 0.932086822452392 -3.74065837837312 P02545 LMNA P02545.S17.p_LMNA P02545_S17s _1_1_17_17 P02545 P02545|P02545-3|P02545-6|P02545-2|Q3BDU5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8311.8311.2 15.02 15.02 1.112 6 1 1 0 834.9111 1588.8492 S17s TMT10 12 (R) SGAQAsSTPLSPTR (I) S(0.0)GAQAS(0.99)S(0.0)T(0.0)PLS(0.0)PT(0.0)R s:Phosphorylated S LMNA 74423.5 7 3 60.1 706.83 HUMAN 1 4.0784 -19.3652 TRSKDPGSAERTAQK-p Q9ULU4-19;S39-p TRSKDPGSAERTAQK 0.873707962583452 0.0263123291203698 -0.0286666666666667 -0.406666666666667 1.14811968299763 21.4706213311483 -0.0286666666666667 -0.406666666666667 0.767693797349874 0.00712751051831068 -0.310630847600036 -4.19761058044035 Q9ULU4 ZMYND8 Q9ULU4.19.S39.p_ZMYND8 Q9ULU4-19_S39s _1_1_39_39 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-18|Q9ULU4-21|Q9ULU4-8|Q9ULU4-23|Q9ULU4-15|A0A087WYS3|Q9ULU4-17 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3859.3859.2 8.35 3.45 2.957 2 1 1 0 742.8787 1404.7847 S39s TMT10 34 (R) SKDPGsAER (T) S(0.0)KDPGS(0.99)AER K:TMT10,s:Phosphorylated S ZMYND8 139738.7 3 1 57.1 712.18 HUMAN 1 -1.1481 -21.4706 TRSLENPTPPFTPKM-p O15085-2;T708-p TRSLENPTPPFTPKM 0.532030362299055 0.646809183668774 0.0936666666666667 0.046 5.07269915264019 2.5793033981634 0.0936666666666667 0.046 0.310978299734306 0.552165998776377 1.11736407720396 0.633505494815331 O15085 ARHGEF11 O15085.2.T708.p_ARHGEF11 O15085-2_T708t _1_1_708_708 O15085-2 O15085-2 Isoform 2 of Rho guanine nucleotide exchange factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19670.19670.2 13.25 11.09 3.385 3 1 1 0 933.4952 1786.0151 T708t TMT10 703 (R) SLENPtPPFTPK (M) S(0.0)LENPT(0.99)PPFT(0.0)PK K:TMT10,t:Phosphorylated T ARHGEF11 173153.4 5 12 228.1 424.05 HUMAN 1 5.0727 2.5793 TRSNRARSMDSSDLS-p Q9Y2X7;S410-p TRSNRARSMDSSDLS 0.546236180544102 0.086899104848181 0.081 0.199666666666667 4.84920593413504 14.0465263658957 0.081 0.199666666666667 0.327400551461678 0.0393864976029606 1.07635046938352 2.69983871094941 Q9Y2X7 GIT1 Q9Y2X7.S410.p_GIT1 Q9Y2X7_S410s_1_1_410_410 Q9Y2X7 Q9Y2X7|A0A0C4DGN6|J3QRU8|Q9Y2X7-3 ARF GTPase-activating protein GIT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30273.30273.4 26.57 26.57 1.111 6 1 1 0 803.9126 3116.664 S410s M411m TMT10 410 (R) smDSSDLSDGAVTLQEYLELKK (A) S(0.99)M(1.0)DS(0.0)S(0.0)DLS(0.0)DGAVT(0.0)LQEY(0.0)LELKK K:TMT10,s:Phosphorylated S,m:Oxidized methionine GIT1 85081.2 46 25 474.2 301.74 HUMAN 1 4.8492 14.0465 TRSNSLSTPRPTRAS-p J3KQR7;T1118-p TRSNSLSTPRPTRAS 0.204713889706557 0.0444388044064333 0.192666666666667 -0.525333333333333 13.3221851036367 18.1035964843565 0.192666666666667 -0.525333333333333 0.0465351898059646 0.0154753454207977 2.56928828747748 -3.48039161909773 J3KQR7 NotFound J3KQR7.T1118.p_NotFound J3KQR7_T1118t _1_1_1118_1118 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4901.4901.2 7.18 7.18 7.177 5 1 1 0 762.8905 1444.807 T1118t TMT10 1113 (R) SNSLStPRPTR (A) S(0.0)NS(0.0)LS(0.0)T(0.99)PRPT(0.0)R t:Phosphorylated T CEP170B 172326.6 2 25 51.1 746.11 HUMAN 1 13.3222 -18.1036 TRSPSIDSIQKDPRE-p Q99569;S515-p TRSPSIDSIQKDPRE 0.548865378149301 0.226437466544035 0.0893333333333333 0.317 4.80832581647932 8.49493527664991 0.0893333333333333 0.317 0.330496921394288 0.14141858006685 1.06881285170513 1.72034833811591 Q99569 PKP4 Q99569.S515.p_PKP4 Q99569_S515s _1_1_515_515 Q99569 Q9UQB3|A0A0D9SF60|Q99569|Q9UQB3-2|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11327.11327.3 7.96 0.97 2.076 3 1 1 0 627.6685 1801.022 S515s TMT10 510 (R) SPSIDsIQKDPR (E) S(0.0)PS(0.0)IDS(0.99)IQKDPR K:TMT10,s:Phosphorylated S PKP4 132664.7 1 21 122.1 546.31 HUMAN 1 4.8083 8.4949 TRSQQQPTPVTPKKY-p O95251;T85-p TRSQQQPTPVTPKKY 0.35217654940372 0.00210285200041402 0.389333333333333 -1.319 8.41652721564751 41.6365002930368 0.389333333333333 -1.319 0.143994955660825 6.86040841068797e-05 1.70735134946949 -10.892497526737 O95251 KAT7 O95251.T85.p_KAT7 O95251_T85t _1_1_85_85 O95251 O95251|O95251-4|O95251-2 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.11401.11401.4 13.16 13.16 1.253 4 1 1 0 659.6295 2555.5277 T85t TMT10 80 (R) SQQQPtPVTPKKYPLR (Q) S(0.0)QQQPT(0.99)PVT(0.0)PKKY(0.0)PLR K:TMT10,t:Phosphorylated T KAT7 71325.8 2 5 691.1 243.06 HUMAN 1 8.4165 -41.6365 TRSRGSDSPAADVEI-p Q13435;S362-p TRSRGSDSPAADVEI 0.701611654046682 0.0906072433075092 0.0546666666666667 0.208 2.8935321840798 13.7977838773605 0.0546666666666667 0.208 0.513625741912586 0.0417082158318848 0.698703262303339 2.65430134630084 Q13435 SF3B2 Q13435.S362.p_SF3B2 Q13435_S362s _1_1_362_362 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.36912.36912.4 31.28 31.28 1.145 5 1 1 0 969.217 3793.8777 S362s TMT10 359 (R) GSDsPAADVEIEYVTEEPEIYEPNFIFFK (R) GS(0.0)DS(0.99)PAADVEIEY(0.0)VT(0.0)EEPEIY(0.0)EPNFIFFK K:TMT10,s:Phosphorylated S SF3B2 100339.9 6 11 193.1 462.57 HUMAN 1 2.8935 13.7978 TRSTANQSFRKVVKN-p Q13464;S1341-p TRSTANQSFRKVVKN 0.23482715126987 0.0438619692060701 0.36 -0.278333333333333 12.0620605194234 18.1909881278952 0.36 -0.278333333333333 0.0622005103503176 0.0151670524005675 2.34334722603873 -3.49811901669289 Q13464 ROCK1 Q13464.S1341.p_ROCK1 Q13464_S1341s _1_1_1341_1341 Q13464 Q13464 Rho-associated protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6389.6399.3 7.37 7.37 3.851 3 1 1 0 526.2795 1496.8585 S1341s TMT10 1336 (R) STANQsFRK (V) S(0.0)T(0.0)ANQS(0.99)FRK K:TMT10,s:Phosphorylated S ROCK1 159198.9 1 7 2757.1 71.63 HUMAN 1 12.0621 -18.191 TRTISINSPKAQTVQ-p Q9P1Y6;S867-p TRTISINSPKAQTVQ 0.413312492292849 0.172330268584419 -0.140333333333333 -0.14 7.07687294851778 10.0396934424597 -0.140333333333333 -0.14 0.196025560875014 0.0990901887693595 -1.47446282106479 -1.9877999773123 Q9P1Y6 PHRF1 Q9P1Y6.S867.p_PHRF1 Q9P1Y6_S867s _1_1_867_867 Q9P1Y6 Q9P1Y6|Q9P1Y6-3|A0A0J9YWD5|A0A0J9YYB5|F8WEF5 PHD and RING finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15137.15137.3 17.53 12.98 3.233 4 1 1 0 751.0909 2171.2912 S867s TMT10 862 (R) TISINsPKAQTVQAVR (C) T(0.0)IS(0.0)INS(0.99)PKAQT(0.0)VQAVR K:TMT10,s:Phosphorylated S PHRF1 180374.6 4 9 438.1 312.23 HUMAN 1 -7.0769 -10.0397 TRTMHFGTPTAYEKE-p Q9NQW7-3;T478-p TRTMHFGTPTAYEKE 0.447122526893569 0.40971270916343 0.114666666666667 0.0783333333333334 6.44702585224472 5.15645921003696 0.114666666666667 0.0783333333333334 0.226619571887378 0.305038094258345 1.36382668826079 1.13241928802924 Q9NQW7 XPNPEP1 Q9NQW7.3.T478.p_XPNPEP1 Q9NQW7-3_T478t _1_1_478_478 Q9NQW7-3 Q9NQW7-3|Q9NQW7-4 Isoform 3 of Xaa-Pro aminopeptidase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15782.15782.3 16.91 16.91 2.458 4 1 1 0 640.9826 1840.9668 T478t TMT10 473 (R) TMHFGtPTAYEK (E) T(0.0)MHFGT(0.99)PT(0.0)AY(0.0)EK K:TMT10,t:Phosphorylated T XPNPEP1 75481.5 1 1 4443.1 31.34 HUMAN 1 6.447 5.1565 TRTSRAPSVATVGSI-p O75369-8;S2138-p TRTSRAPSVATVGSI 0.0520154613962689 0.00835609150077889 -0.509333333333333 0.479333333333333 27.9040899159961 29.5398987420316 -0.509333333333334 0.479333333333333 0.00162028349616762 0.00111175764817471 -5.8189307623122 6.2835897071417 O75369 FLNB O75369.8.S2138.p_FLNB O75369-8_S2138s _1_1_2138_2138 O75369-8 O75369-8|O75369-9|O75369-2|O75369-7|E7EN95|O75369-4|O75369-5 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26581.26581.3 17.18 17.18 1.181 3 1 1 0 728.3907 2103.1884 S2138s TMT10 2136 (R) APsVATVGSICDLNLK (I) APS(0.99)VAT(0.0)VGS(0.0)ICDLNLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FLNB 283797.6 8 36 67.1 680.07 HUMAN 1 -27.9041 29.5399 TRVAFRGSDEIFCRV-p A0A087WVW6;S313-p TRVAFRGSDEIFCRV 0.294750125885592 0.542568641334292 -0.160333333333333 0.0636666666666667 10.0111029612371 3.57383731721055 -0.160333333333333 0.0636666666666667 0.0997446713890883 0.439153419006644 -1.98363948710293 0.834607534119655 A0A087WVW6 RAPGEFL1 A0A087WVW6.S313.p_RAPGEFL1 A0A087WVW6_S313s _1_1_313_313 A0A087WVW6 Q9UHV5|A0A087WVW6|Q9UHV5-3|F5H2D5|Q9UHV5-2 Rap guanine nucleotide exchange factor-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17271.17685.3 13.02 13.02 99 1 1 1 0 589.2814 1685.8631 S313s TMT10 308 (R) VAFRGsDEIFCR (V) VAFRGS(1.0)DEIFCR C:Carbamidomethylation,s:Phosphorylated S RAPGEFL1 74035.2 7 1 3882.1 41.41 HUMAN 1 -10.0111 3.5738 TRVSTNGSDDPEDAG-p Q96J02;S221-p TRVSTNGSDDPEDAG 0.398962840085262 0.927601724721068 0.12 0.0173333333333333 7.36333694238343 0.460047640559604 0.12 0.0173333333333333 0.183512776387304 0.899487714415694 1.52447541748729 0.13234029498985 Q96J02 ITCH Q96J02.S221.p_ITCH Q96J02_S221s _1_1_221_221 Q96J02 Q96J02|Q96J02-2|Q96J02-3 E3 ubiquitin-protein ligase Itchy homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5696.5696.3 17.75 9.95 2.051 3 1 1 0 752.6633 2176.0064 S221s TMT10 216 (R) VSTNGsDDPEDAGAGENRR (V) VS(0.0)T(0.0)NGS(0.99)DDPEDAGAGENRR s:Phosphorylated S ITCH 103656.7 1 5 2298.1 89.16 HUMAN 1 7.3633 0.46 TRWGYWGSWGKSILS-p Q9NRY5;S87-p TRWGYWGSWGKSILS 0.0559124300104654 0.0419290620796673 -0.550333333333333 -0.417666666666667 27.2961634172059 18.4610736857061 -0.550333333333333 -0.417666666666667 0.00186373284211051 0.0142525519094295 -5.64983344646556 -3.5531829242306 Q9NRY5 FAM114A2 Q9NRY5.S87.p_FAM114A2 Q9NRY5_S87s _1_1_87_87 Q9NRY5 Q9NRY5 Protein FAM114A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29163.29163.3 11.76 11.76 6.262 2 1 1 0 555.6061 1584.8364 S87s TMT10 82 (R) WGYWGsWGK (S) WGY(0.0)WGS(0.99)WGK K:TMT10,s:Phosphorylated S FAM114A2 55752.5 1 2 1989.1 103.91 HUMAN 1 -27.2962 -18.4611 TRWSPAYSFSSDSPL-p Q8NCG7;S574-p TRWSPAYSFSSDSPL 0.233121410286087 0.0973289518686825 -0.195333333333333 -0.211 12.1541285857068 13.3776571883162 -0.195333333333333 -0.211 0.0608957721209129 0.0459445795100281 -2.35970287256127 -2.5778828545921 Q8NCG7 DAGLB Q8NCG7.S574.p_DAGLB Q8NCG7_S574s _1_1_574_574 Q8NCG7 Q8NCG7|E7ET49|Q8NCG7-4|Q8NCG7-2 Sn1-specific diacylglycerol lipase beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28543.28543.4 19.39 19.39 1.178 10 1 1 0 884.9349 3456.7516 S574s TMT10 569 (R) WSPAYsFSSDSPLDSSPKYPPLYPPGR (I) WS(0.0)PAY(0.0)S(0.99)FS(0.0)S(0.0)DS(0.0)PLDS(0.0)S(0.0)PKY(0.0)PPLY(0.0)PPGR K:TMT10,s:Phosphorylated S DAGLB 74928.9 5 1 3425.1 51.4 HUMAN 1 -12.1541 -13.3777 TRYKVSTSPLTKQLP-p Q9Y320;S211-p TRYKVSTSPLTKQLP 0.191190984077322 0.00463734855393385 -0.215333333333333 -0.545333333333333 14.030535100202 34.1555805941637 -0.215333333333333 -0.545333333333333 0.0395317909404217 0.000384097906946711 -2.69852650999116 -7.78846858741367 Q9Y320 TMX2 Q9Y320.S211.p_TMX2 Q9Y320_S211s _1_1_211_211 Q9Y320 Q9Y320|Q9Y320-2 Thioredoxin-related transmembrane protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14901.14901.3 7.64 7.64 1.413 5 1 1 0 631.0347 1811.1245 S211s TMT10 206 (R) YKVSTsPLTK (Q) Y(0.0)KVS(0.0)T(0.0)S(0.99)PLT(0.0)K K:TMT10,s:Phosphorylated S TMX2 34379.4 4 1 2316.1 88.11 HUMAN 1 -14.0305 -34.1556 TSAEKFPSPHPSPAK-p O14681;S326-p TSAEKFPSPHPSPAK 0.293822417676096 0.00134431243140562 -0.151 -0.966 10.0382573104973 46.6452451764721 -0.151 -0.966 0.0991229614903743 2.16508764806682e-05 -1.988357856856 -13.5658680367505 O14681 EI24 O14681.S326.p_EI24 O14681_S326s _1_1_326_326 O14681 O14681|O14681-3|B7ZB74 Etoposide-induced protein 2.4 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20625.20625.4 22.53 21.27 2.899 10 1 1 0 871.9645 3404.8669 S326s TMT10 308 (K) TVYLQSALSSSTSAEKFPsPHPSPAK (L) T(0.0)VY(0.0)LQS(0.0)ALS(0.0)S(0.0)S(0.0)T(0.0)S(0.0)AEKFPS(0.99)PHPS(0.0)PAK K:TMT10,s:Phosphorylated S EI24 39249.3 2 3 3055.1 62.02 HUMAN 1 -10.0383 -46.6452 TSAKNKASVDELFAE-p P61225;S152-p TSAKNKASVDELFAE 0.373228695696441 0.395048942133819 0.148 0.0806666666666667 7.93389026036233 5.36160603473685 0.148 0.0806666666666667 0.160920352029694 0.290964092466783 1.62369020037695 1.16967967627557 P61225 RAP2B P61225.S152.p_RAP2B P61225_S152s _1_1_152_152 P61225 P61225 Ras-related protein Rap-2b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29544.29544.3 10.49 10.49 99 1 1 1 0 710.384 2049.1745 S152s TMT10 149 (K) NKAsVDELFAEIVR (Q) NKAS(1.0)VDELFAEIVR K:TMT10,s:Phosphorylated S RAP2B 20732.2 1 1 6629.1 10.49 HUMAN 1 7.9339 5.3616 TSAKTRQTLNSSSRK-p Q14155-5;T636-p TSAKTRQTLNSSSRK 0.0752440132125947 0.632304272196118 -0.505 -0.046 24.0368618205878 2.70669335806638 -0.505 -0.046 0.00394742436974365 0.536204759022027 -4.80390698341232 -0.660094126957381 Q14155 ARHGEF7 Q14155.5.T636.p_ARHGEF7 Q14155-5_T636t_1_1_636_636 Q14155-5 Q14155-5|Q14155-1 Isoform 5 of Rho guanine nucleotide exchange factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3905.3905.4 8.68 8.68 2.036 5 1 1 0 454.9974 1736.0179 T636t N638n TMT10 633 (K) TRQtLnSSSRK (E) T(0.0)RQT(0.99)LN(1.0)S(0.0)S(0.0)S(0.0)RK K:TMT10,t:Phosphorylated T,n:Deamidated ARHGEF7 83311.3 2 10 434.1 313.68 HUMAN 1 -24.0369 -2.7067 TSAPRAGSQVVATTA-p Q9BWH2;S10-p TSAPRAGSQVVATTA 0.22202506952008 0.425838785720492 0.216666666666667 -0.119 12.57944337305 4.93404198312178 0.216666666666667 -0.119 0.0552148202527342 0.321067097294858 2.4355537871264 -1.09173877941657 Q9BWH2 FUNDC2 Q9BWH2.S10.p_FUNDC2 Q9BWH2_S10s _1_1_10_10 Q9BWH2 Q9BWH2 FUN14 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7477.7477.2 11.48 11.48 2.151 3 1 1 0 685.3543 1289.7375 S10s TMT10 8 (R) AGsQVVATTAR (H) AGS(0.99)QVVAT(0.0)T(0.0)AR s:Phosphorylated S FUNDC2 20732.3 2 1 4615.1 28.8 HUMAN 1 12.5794 -4.934 TSARSLGSPLLHERG-p Q92844;S129-p TSARSLGSPLLHERG 0.169333466748667 0.237989463934038 0.219666666666667 0.12 15.3862817055091 8.21192999643806 0.219666666666667 0.12 0.0289315585248846 0.150940922649912 2.95121749463723 1.67136151488641 Q92844 TANK Q92844.S129.p_TANK Q92844_S129s _1_1_129_129 Q92844 Q92844|E7EQA9|E7EW82|E7EVA2 TRAF family member-associated NF-kappa-B activator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14502.14716.3 15.48 10.95 2.448 2 1 1 0 473.2515 1337.7739 S129s TMT10 126 (R) SLGsPLLHER (G) S(0.0)LGS(0.99)PLLHER s:Phosphorylated S TANK 48442.4 3 2 3536.1 48.81 HUMAN 1 15.3863 8.2119 TSASLKRSPSASSLS-p P30622;S310-p TSASLKRSPSASSLS 0.375995901550186 0.0840964096308611 0.165333333333333 -0.209 7.85618644698318 14.2340326125508 0.165333333333333 -0.209 0.163825444621005 0.0377221761496317 1.61020252135016 -2.73431575897399 P30622 CLIP1 P30622.S310.p_CLIP1 P30622_S310s _1_1_310_310 P30622 P30622|P30622-1 CAP-Gly domain-containing linker protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16249.16249.3 13.2 5.18 2.98 13 1 1 0 850.7398 2470.2405 S310s TMT10 310 (R) sPSASSLSSMSSVASSVSSRPSR (T) S(0.99)PS(0.0)AS(0.0)S(0.0)LS(0.0)S(0.0)MS(0.0)S(0.0)VAS(0.0)S(0.0)VS(0.0)S(0.0)RPS(0.0)R s:Phosphorylated S CLIP1 162985.2 4 9 372.1 339.16 HUMAN 1 7.8562 -14.234 TSASPKKSPPPAKDE-p Q8IXJ6;S372-p TSASPKKSPPPAKDE 0.140760843773736 0.00966342712885982 0.266333333333333 0.482 17.4205911354261 28.3966408357565 0.266333333333333 0.482 0.0181109356072165 0.00144655821642635 3.34593847972869 5.94997340315749 Q8IXJ6 SIRT2 Q8IXJ6.S372.p_SIRT2 Q8IXJ6_S372s _1_1_372_372 Q8IXJ6 Q8IXJ6|Q8IXJ6-3|Q8IXJ6-2|Q8IXJ6-5 NAD-dependent protein deacetylase sirtuin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5645.5645.3 12.04 8.04 99 1 1 1 0 655.0384 1883.1318 S372s TMT10 371 (K) KsPPPAKDEAR (T) KS(1.0)PPPAKDEAR K:TMT10,s:Phosphorylated S SIRT2 43809 2 2 1502.1 135.85 HUMAN 1 17.4206 28.3966 TSASVAATPPPSTAS-p P09874;T368-p TSASVAATPPPSTAS 0.349266178256773 0.0169048692505771 0.131666666666667 0.368 8.48821579892864 24.4486468187461 0.131666666666667 0.368 0.14163755464411 0.00359033785503615 1.71976605673136 4.89953753842802 P09874 PARP1 P09874.T368.p_PARP1 P09874_T368t _1_1_368_368 P09874 P09874 Poly [ADP-ribose] polymerase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24427.24866.5 32.29 32.29 3.457 11 1 1 0 907.8746 4455.3684 T368t TMT10 356 (R) IFPPETSASVAAtPPPSTASAPAAVNSSASADKPLSNMK (I) IFPPET(0.0)S(0.0)AS(0.0)VAAT(0.99)PPPS(0.0)T(0.0)AS(0.0)APAAVNS(0.0)S(0.0)AS(0.0)ADKPLS(0.0)NMK K:TMT10,t:Phosphorylated T PARP1 113880.5 25 4 1179.1 169.18 HUMAN 1 8.4882 24.4486 TSDDEVGSPKEESRK-p Q6ULP2;S382-p TSDDEVGSPKEESRK 0.351829215018476 0.96591333113457 -0.178666666666667 0.00633333333333334 8.42966127067027 0.215258940788964 -0.178666666666667 0.00633333333333331 0.143560139916411 0.951643106299879 -1.70962600558681 0.0635007530236289 Q6ULP2 AFTPH Q6ULP2.S382.p_AFTPH Q6ULP2_S382s _1_1_382_382 Q6ULP2 Q6ULP2|Q6ULP2-4|Q6ULP2-2|Q6ULP2-5|Q6ULP2-3 Aftiphilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11383.11383.4 16.71 16.71 2.899 5 1 1 0 876.9163 3424.675 S382s TMT10 365 (K) CAHLCMDSVKTSDDEVGsPKEESR (K) CAHLCMDS(0.0)VKT(0.0)S(0.0)DDEVGS(0.99)PKEES(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AFTPH 102996.9 5 3 973.1 193.16 HUMAN 1 -8.4297 0.2153 TSDDGGDSPEHDTDI-p Q9HAJ7;S99-p TSDDGGDSPEHDTDI 0.0733886121098041 0.00514837249307617 0.441666666666667 0.524 24.3597999466788 33.29614294832 0.441666666666667 0.524 0.00366454454609541 0.000468150730258081 4.88343985499228 7.48752391545839 Q9HAJ7 SAP30L Q9HAJ7.S99.p_SAP30L Q9HAJ7_S99s _1_1_99_99 Q9HAJ7 Q9HAJ7 Histone deacetylase complex subunit SAP30L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30622.30622.4 26.66 26.66 2.415 5 1 1 0 881.4081 3442.6448 S99s TMT10 92 (K) TSDDGGDsPEHDTDIPEVDLFQLQVNTLR (R) T(0.0)S(0.0)DDGGDS(0.99)PEHDT(0.0)DIPEVDLFQLQVNT(0.0)LR s:Phosphorylated S SAP30L 21104.4 16 2 1284.1 158.43 HUMAN 1 24.3598 33.2961 TSDISEPSPESSILS-p Q96JQ2;S402-p TSDISEPSPESSILS 0.37683480915912 0.215122720821492 -0.144333333333333 -0.121666666666667 7.83490966778718 8.78096001971835 -0.144333333333333 -0.121666666666667 0.16463002086225 0.132404881826447 -1.60650820636331 -1.7698270204919 Q96JQ2 CLMN Q96JQ2.S402.p_CLMN Q96JQ2_S402s _1_1_402_402 Q96JQ2 Q96JQ2 Calmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17798.17798.3 16.25 16.25 5.08 8 1 1 0 701.0009 2021.0236 S402s TMT10 395 (K) TSDISEPsPESSILSSR (K) T(0.0)S(0.0)DIS(0.0)EPS(0.99)PES(0.0)S(0.0)ILS(0.0)S(0.0)R s:Phosphorylated S CLMN 112105.2 5 5 726.1 236.61 HUMAN 1 -7.8349 -8.781 TSDSAMLTPPSSPPP-p Q7RTP6;T1454-p TSDSAMLTPPSSPPP 0.758480407783315 0.0798717565116863 0.0486666666666667 0.204 2.29980459525473 14.5678106998875 0.0486666666666667 0.204 0.588870150150678 0.0349316363219989 0.574217854505337 2.79601947029276 Q7RTP6 MICAL3 Q7RTP6.T1454.p_MICAL3 Q7RTP6_T1454t _1_1_1454_1454 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23764.23764.4 24.98 21.55 1.845 10 1 1 0 968.2165 3789.8843 T1454t TMT10 1439 (K) TLGSQSFNTSDSAMLtPPSSPPPPPPPGEEPATLR (R) T(0.0)LGS(0.0)QS(0.0)FNT(0.0)S(0.0)DS(0.0)AMLT(0.99)PPS(0.0)S(0.0)PPPPPPPGEEPAT(0.0)LR t:Phosphorylated T MICAL3 225431.9 3 15 190.1 466.81 HUMAN 1 2.2998 14.5678 TSEAPILTPPREPRI-p Q16513;T958-p TSEAPILTPPREPRI 0.575281775131801 0.586958482236644 0.0906666666666667 0.11 4.41571888315151 3.12838209599286 0.0906666666666667 0.11 0.36176630297507 0.486588443723201 0.995806271062573 0.746262332675418 Q16513 PKN2 Q16513.T958.p_PKN2 Q16513_T958t _1_1_958_958 Q16513 Q16513|Q16513-2|Q16513-3|Q16513-4|Q16513-5 Serine/threonine-protein kinase N2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.20392.20600.4 24.31 24.31 3.709 4 1 1 0 821.6431 3203.5807 T958t TMT10 939 (R) GREDVSNFDDEFTSEAPILtPPREPR (I) GREDVS(0.0)NFDDEFT(0.0)S(0.0)EAPILT(0.99)PPREPR t:Phosphorylated T PKN2 112888.4 6 12 389.1 332.6 HUMAN 1 4.4157 3.1284 TSEGKRMSADMSEIE-p O43318;S389-p TSEGKRMSADMSEIE 0.0715981735064038 0.938541776588492 -0.426333333333333 0.01 24.7441084546724 0.391033519744356 -0.426333333333333 0.01 0.00335420154410993 0.913895729685694 -4.97925790356259 0.113265494990277 O43318 MAP3K7 O43318.S389.p_MAP3K7 O43318_S389s _1_1_389_389 O43318 O43318|O43318-2|O43318-3|O43318-4|Q9UG54 Mitogen-activated protein kinase kinase kinase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17055.17055.2 13.1 13.1 2.361 2 1 1 0 774.8364 1468.6973 S389s TMT10 388 (R) MsADMSEIEAR (I) MS(0.99)ADMS(0.0)EIEAR s:Phosphorylated S MAP3K7 67936.6 8 5 1139.1 173.29 HUMAN 1 -24.7441 0.391 TSEMEAGSPENKKQR-p Q5VYS8;S172-p TSEMEAGSPENKKQR 0.518846820664332 0.0110966201982267 -0.0866666666666667 -0.428666666666667 5.26375491030533 27.375632468671 -0.0866666666666667 -0.428666666666667 0.297594231692625 0.00182993959043567 -1.15218034899429 -5.66376410227283 Q5VYS8 ZCCHC6 Q5VYS8.S172.p_ZCCHC6 Q5VYS8_S172s _1_1_172_172 Q5VYS8 Q5VYS8 Terminal uridylyltransferase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18486.18486.3 17.31 17.31 2.168 6 1 1 0 978.8256 2854.4959 S172s TMT10 158 (K) DLTSLETTSEMEAGsPENKK (Q) DLT(0.0)S(0.0)LET(0.0)T(0.0)S(0.0)EMEAGS(0.99)PENKK K:TMT10,s:Phosphorylated S ZCCHC6 173394.2 2 1 2208.1 93.42 HUMAN 1 -5.2638 -27.3756 TSEPSAPSQDLLDLS-p O75674;S314-p TSEPSAPSQDLLDLS 0.765494946141546 0.864789497199412 0.0456666666666667 -0.02 2.22897694976996 0.890048197296136 0.0456666666666667 -0.02 0.59855257710327 0.814695242615206 0.558934022887082 -0.246042234913823 O75674 TOM1L1 O75674.S314.p_TOM1L1 O75674_S314s _1_1_314_314 O75674 O75674 TOM1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21274.21802.2 21.15 21.15 1.102 8 1 1 0 1411.666 2742.3631 S314s TMT10 302 (K) EATNTTSEPSAPsQDLLDLSPSPR (M) EAT(0.0)NT(0.0)T(0.0)S(0.0)EPS(0.0)APS(0.99)QDLLDLS(0.0)PS(0.0)PR s:Phosphorylated S TOM1L1 53159.1 1 1 5271.1 21.15 HUMAN 1 2.229 -0.89 TSEPVQLTPDDEDAI-p Q05513;T560-p TSEPVQLTPDDEDAI 0.356248904903213 0.0234454335466919 -0.167 0.301666666666667 8.33138053665204 22.2321449560097 -0.167 0.301666666666667 0.14684594091092 0.00598116115914349 -1.69260302156784 4.37053306019389 Q05513 PRKCZ Q05513.T560.p_PRKCZ Q05513_T560t _1_1_560_560 Q05513 Q05513|Q05513-3|Q05513-2 Protein kinase C zeta type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29867.29867.5 30.66 30.66 1.182 6 1 1 0 1092.9497 5380.7468 T560t TMT10 529 (K) KQALPPFQPQITDDYGLDNFDTQFTSEPVQLtPDDEDAIKR (I) KQALPPFQPQIT(0.0)DDY(0.0)GLDNFDT(0.0)QFT(0.0)S(0.0)EPVQLT(0.99)PDDEDAIKR K:TMT10,t:Phosphorylated T PRKCZ 68571.6 18 4 859.1 210.7 HUMAN 1 -8.3314 22.2321 TSESIKKSEEKKRIS-p Q9NWH9;S543-p TSESIKKSEEKKRIS 0.167300432977981 0.0347692382701335 -0.728 0.278333333333333 15.5241907984189 19.6424769584809 -0.728 0.278333333333333 0.0280272779281521 0.0108580616746049 -2.97735396860098 3.79916452381518 Q9NWH9 SLTM Q9NWH9.S543.p_SLTM Q9NWH9_S543s _1_1_543_543 Q9NWH9 Q9NWH9|Q9NWH9-3 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.7187.7187.4 14.49 14.49 1.146 5 1 1 0 752.1464 2925.5935 S543s TMT10 528 (K) NDNGASGQTSESIKKsEEK (K) NDNGAS(0.0)GQT(0.0)S(0.0)ES(0.0)IKKS(0.99)EEK K:TMT10,s:Phosphorylated S SLTM 117431.6 6 11 167.1 494.15 HUMAN 1 -15.5242 19.6425 TSFDKQKSPLETPAP-p Q9BVV6-3;S389-p TSFDKQKSPLETPAP 0.104709651653521 0.00363879152855353 -0.431333333333333 -0.656666666666667 20.6595677829699 36.2254789172182 -0.431333333333333 -0.656666666666667 0.00859099016201832 0.000238480079761747 -4.02195237354051 -8.55648702709573 Q9BVV6 KIAA0586 Q9BVV6.3.S389.p_KIAA0586 Q9BVV6-3_S389s _1_1_389_389 Q9BVV6-3 Q9BVV6-3|Q9BVV6-4|Q9BVV6-2|A0A087WYM5 Isoform 3 of Protein TALPID3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8526.8526.3 10.23 10.23 1.246 2 1 1 0 587.9939 1682.0001 S389s TMT10 387 (K) QKsPLETPAPR (R) QKS(0.99)PLET(0.0)PAPR K:TMT10,s:Phosphorylated S KIAA0586 183368.4 1 2 1314.1 155.12 HUMAN 1 -20.6596 -36.2255 TSFFSGCSPIEEEAH-p O95239;S1225-p TSFFSGCSPIEEEAH 0.540088410971781 0.413821028716783 0.102 -0.079 4.93858545406032 5.09761920582643 0.102 -0.079 0.320731381255253 0.309198999108624 1.09279144701315 -1.1216871300548 O95239 KIF4A O95239.S1225.p_KIF4A O95239_S1225s _1_1_1225_1225 O95239 Q2VIQ3|O95239 Chromosome-associated kinesin KIF4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23027.23027.2 23.99 23.99 2.267 5 1 1 0 1232.0395 2383.1074 S1225s TMT10 1213 (R) ALASNTSFFSGCsPIEEEAH (-) ALAS(0.0)NT(0.0)S(0.0)FFS(0.0)GCS(0.99)PIEEEAH C:Carbamidomethylation,s:Phosphorylated S KIF4A 141476.1 9 15 516.1 285.41 HUMAN 1 4.9386 -5.0976 TSFFSGKSPVTTLLE-p P55265-4;S657-p TSFFSGKSPVTTLLE 0.109500745299266 0.0500206993057638 -0.337333333333333 -0.278 20.1125141208686 17.3908481974065 -0.337333333333333 -0.278 0.00974425381774765 0.0182353952175363 -3.90313882114111 -3.33740010537089 P55265 ADAR P55265.4.S657.p_ADAR P55265-4_S657s _1_1_657_657 P55265-4 P55265-4|P55265-2|P55265-3|P55265-5 Isoform 4 of Double-stranded RNA-specific adenosine deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26916.26916.3 20.93 17.29 2.441 3 1 1 0 652.0028 1874.028 S657s TMT10 657 (K) sPVTTLLECMHK (L) S(0.99)PVT(0.0)T(0.0)LLECMHK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ADAR 142147.5 4 11 584.1 265.43 HUMAN 1 -20.1125 -17.3908 TSFMMTPYVVTRYYR-p A0A286YEW9;Y223-p TSFMMTPYVVTRYYR 0.378884705554379 0.0602737572418098 0.160666666666667 0.248333333333333 7.78701183203355 16.2503777490785 0.160666666666667 0.248333333333333 0.166455755710849 0.0237116745268978 1.59818976048511 3.11417096364534 A0A286YEW9 NotFound A0A286YEW9.Y223.p_NotFound A0A286YEW9_Y223y _1_1_223_223 A0A286YEW9 A0A286YEW9|A0A286YF62|A0A286YFA6|P53779|P53779-3|A0A286YFD7|A0A286YFJ4|P53779-2|A0A1P0B7D2|A0A286YFJ6|A0A286YF97|A0A286YF85|A0A286YEN5|A0A286YES9|P45983|P45983-4|P45983-3|A0A286YF19|A0A286YF35|A0A286YFM6|A0A286YFB6|A0A286YFN2|A0A286YEX7|A0A286YEQ7|A0A286YEQ0|D6RJF9|A0A286YFI3|P45983-2|A0A286YES0|A0A286YEY0|Q499Y8|A0A286YF02|P45983-5|A0A286YF83|D6RCB1|A6NF29 Mitogen-activated protein kinase GG20160819_MSz_CCLE_T4D7_pY_Injection_01.27912.27912.3 18.24 18.24 3.914 6 1 1 0 657.649 1890.9655 Y223y TMT10 213 (R) TAGTSFMMTPyVVTR (Y) T(0.0)AGT(0.0)S(0.0)FMMT(0.0)PY(0.99)VVT(0.0)R y:Phosphorylated Y MAPK10 63769.9 6 1 190.1 18.24 HUMAN 1 7.787 16.2504 TSFRHAQSGYLKRMK-p H3BU86;S181-p TSFRHAQSGYLKRMK 0.376518154999368 0.0532675001149767 -0.128333333333333 -0.236333333333333 7.84496945659329 16.9855051266258 -0.128333333333333 -0.236333333333333 0.164249121107646 0.0200193276384058 -1.60825496338482 -3.2573010746325 H3BU86 NotFound H3BU86.S181.p_NotFound H3BU86_S181s _1_1_181_181 H3BU86 H3BU86|O14662|O14662-5|O14662-4|O14662-2 STX16-NPEPL1 readthrough (NMD candidate) HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7594.7594.3 7.56 7.56 2.586 2 1 1 0 481.2589 1361.7942 S181s TMT10 178 (R) HAQsGYLK (R) HAQS(0.99)GY(0.0)LK K:TMT10,s:Phosphorylated S STX16-NPEPL1 43684.8 1 4 1109.2 176.13 HUMAN 1 -7.845 -16.9855 TSFSRSISLTRPGSS-p Q9HB19;S314-p TSFSRSISLTRPGSS 0.388105146686967 0.791074920740389 0.118333333333333 -0.0283333333333333 7.6041115083568 1.41717158423211 0.118333333333333 -0.0283333333333333 0.173615641421454 0.721577265503676 1.56639913711622 -0.375439553706829 Q9HB19 PLEKHA2 Q9HB19.S314.p_PLEKHA2 Q9HB19_S314s _1_1_314_314 Q9HB19 Q9HB19 Pleckstrin homology domain-containing family A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19973.19973.3 14.99 6.71 1.112 9 1 1 0 862.4375 2505.3293 S314s TMT10 312 (R) SIsLTRPGSSSLSSGPNSILCR (G) S(0.0)IS(0.99)LT(0.0)RPGS(0.0)S(0.0)S(0.0)LS(0.0)S(0.0)GPNS(0.0)ILCR C:Carbamidomethylation,s:Phosphorylated S PLEKHA2 47881.8 1 3 3407.1 51.78 HUMAN 1 7.6041 -1.4172 TSFSTPPTPERNNRP-p Q6ICG6-2;T298-p TSFSTPPTPERNNRP 0.556834730821111 0.0707893660100264 -0.085 -0.216 4.69522523397255 15.2890421192081 -0.085 -0.216 0.339216896605404 0.0295866495833657 -1.04789838526297 -2.93088121089201 Q6ICG6 KIAA0930 Q6ICG6.2.T298.p_KIAA0930 Q6ICG6-2_T298t _1_1_298_298 Q6ICG6-2 Q6ICG6-2|Q6ICG6-3 Isoform 2 of Uncharacterized protein KIAA0930 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14029.14029.2 12.51 12.51 1.98 5 1 1 0 814.3993 1547.8267 T298t TMT10 290 (R) VTSFSTPPtPER (N) VT(0.0)S(0.0)FS(0.0)T(0.0)PPT(0.99)PER t:Phosphorylated T KIAA0930 46582.9 6 1 1552.1 132.36 HUMAN 1 -4.6952 -15.289 TSFTRTISNPEVVMK-p P55196-5;S215-p TSFTRTISNPEVVMK 0.790000475046438 0.117214348370486 -0.108 0.249 1.9764957501731 12.2757200847089 -0.108 0.249 0.634381376566876 0.0592144897777405 -0.503590541522865 2.38011744669224 P55196 MLLT4 P55196.5.S215.p_MLLT4 P55196-5_S215s _1_1_215_215 P55196-5 P55196-5|J3KN01|P55196-1 Isoform 5 of Afadin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18865.18865.3 10.93 9.87 2.14 2 1 1 0 552.6329 1575.918 S215s TMT10 213 (R) TIsNPEVVMK (R) T(0.0)IS(0.99)NPEVVMK K:TMT10,s:Phosphorylated S AFDN 208811.7 1 1 5726.1 16.79 HUMAN 1 -1.9765 12.2757 TSGFSSPSPSAAAAA-p K4DI93;S15-p TSGFSSPSPSAAAAA 0.247954412325461 0.494619986621851 0.176 0.0666666666666667 11.5689465320969 4.0878607344286 0.176 0.0666666666666667 0.0696795515265211 0.390134113215029 2.25610265027433 0.93372671785742 K4DI93 CUL4B K4DI93.S15.p_CUL4B K4DI93_S15s _1_1_15_15 K4DI93 K4DI93 Cullin 4B, isoform CRA_e HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18750.18750.3 24.83 24.83 2.858 7 1 1 0 891.4239 2592.2925 S15s TMT10 3 (K) SVCPVTSGFSSPsPSAAAAAQEVR (S) S(0.0)VCPVT(0.0)S(0.0)GFS(0.0)S(0.0)PS(0.99)PS(0.0)AAAAAQEVR C:Carbamidomethylation,s:Phosphorylated S CUL4B 103381.4 2 2 1144.1 172.94 HUMAN 1 11.5689 4.0879 TSGGRRGSLEMSSDG-p Q6ZN18;S206-p TSGGRRGSLEMSSDG 0.615272550437237 0.0504482638746165 0.123333333333333 -0.349666666666667 3.91528738130696 17.3318403801551 0.123333333333333 -0.349666666666667 0.405948799922305 0.0184848513302494 0.900901711716269 -3.32568586270834 Q6ZN18 AEBP2 Q6ZN18.S206.p_AEBP2 Q6ZN18_S206s _1_1_206_206 Q6ZN18 Q6ZN18|Q6ZN18-2 Zinc finger protein AEBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8134.8134.3 17.84 17.84 3.142 4 1 1 0 567.5831 1620.7646 S206s Hydrogen 204 (R) RGsLEMSSDGEPLSR (M) RGS(0.99)LEMS(0.0)S(0.0)DGEPLS(0.0)R s:Phosphorylated S AEBP2 54979.1 6 4 1557.1 131.71 HUMAN 1 3.9153 -17.3318 TSGGVSESPSGFSKH-p E7EPP6;S302-p TSGGVSESPSGFSKH 0.463034255771599 0.00143210512461058 -0.132333333333333 -1.11766666666667 6.1700917120403 45.9274783866834 -0.132333333333333 -1.11766666666667 0.241540982654325 2.55418388992433e-05 -1.31480795644524 -13.1480886232905 E7EPP6 CHEK1 E7EPP6.S302.p_CHEK1 E7EPP6_S302s _1_1_302_302 E7EPP6 E7EPP6|O14757|O14757-3|J3KN87|O14757-2 Serine/threonine-protein kinase Chk1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14826.14826.3 17.54 17.54 2.865 6 1 1 0 655.3301 1884.0115 S302s TMT10 294 (R) VTSGGVSEsPSGFSK (H) VT(0.0)S(0.0)GGVS(0.0)ES(0.99)PS(0.0)GFS(0.0)K K:TMT10,s:Phosphorylated S CHEK1 56201.4 2 2 3241.1 56.14 HUMAN 1 -6.1701 -45.9275 TSGHSDWSVGSEESK-p Q96PE2;S787-p TSGHSDWSVGSEESK 0.395304354889455 0.00997849562030855 -0.136 0.577333333333333 7.435868277013 28.1136124093753 -0.136 0.577333333333333 0.180473388391645 0.00154396964985256 -1.53711435885023 5.86955223839564 Q96PE2 ARHGEF17 Q96PE2.S787.p_ARHGEF17 Q96PE2_S787sS790s_2_2_787_790 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23525.23525.3 17.28 17.28 1.443 9 2 2 0 1152.178 3294.5836 S787s S790s TMT10 767 (K) TGLPATSAMDEGLTSGHSDWsVGsEESK (G) T(0.0)GLPAT(0.0)S(0.0)AMDEGLT(0.0)S(0.0)GHS(0.0)DWS(0.99)VGS(0.99)EES(0.0)K K:TMT10,s:Phosphorylated S ARHGEF17 223779.6 3 46 30.1 908.19 HUMAN 1 -7.4359 28.1136 TSGILNSTNIQS___-p O43663;T616-p TSGILNSTNIQS___ 0.18273764143602 0.2231228198698 0.403333333333333 -0.131333333333333 14.508556621452 8.58102811960797 0.403333333333333 -0.131333333333333 0.0354115011720849 0.13864275764601 2.78677862472708 -1.73524343413336 O43663 PRC1 O43663.T616.p_PRC1 O43663_T616t _1_1_616_616 O43663 O43663|O43663-4|O43663-2 Protein regulator of cytokinesis 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17451.17451.2 12.97 9.74 1.643 6 1 1 0 908.9276 1736.8864 T616t TMT10 606 (K) SDATSGILNStNIQS (-) S(0.0)DAT(0.0)S(0.0)GILNS(0.0)T(0.99)NIQS(0.0) t:Phosphorylated T PRC1 72290 4 11 715.1 238.03 HUMAN 1 14.5086 -8.581 TSGLDLMSESGEGEI-p Q8WWI1-3;S684-p TSGLDLMSESGEGEI 0.746997175501022 0.050124945718593 0.0443333333333333 0.232 2.40487070866647 17.371378049408 0.0443333333333333 0.232 0.574794930482894 0.0183173310730769 0.596707373198421 3.33353283731716 Q8WWI1 LMO7 Q8WWI1.3.S684.p_LMO7 Q8WWI1-3_S684s _1_1_684_684 Q8WWI1-3 Q8WWI1|Q8WWI1-2|Q8WWI1-3|E9PMS6|J3KP06|F8WD26|Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22770.22770.3 17.91 17.91 1.403 8 1 1 0 921.0981 2681.3137 S684s TMT10 672 (K) ATLSSTSGLDLMsESGEGEISPQR (E) AT(0.0)LS(0.0)S(0.0)T(0.0)S(0.0)GLDLMS(0.99)ES(0.0)GEGEIS(0.0)PQR s:Phosphorylated S LMO7 154694.3 11 18 61.1 704.74 HUMAN 1 2.4049 17.3714 TSGNDDSTSLDLEWE-p Q63HQ0;T204-p TSGNDDSTSLDLEWE 0.898896426785364 0.259691928681974 -0.0256666666666667 0.181666666666667 0.905373394085465 7.71430025973016 -0.0256666666666667 0.181666666666667 0.811825447484197 0.169266094594743 -0.249970955935407 1.58507302459788 Q63HQ0 AP1AR Q63HQ0.T204.p_AP1AR Q63HQ0_T204t_1_1_204_204 Q63HQ0 Q63HQ0|Q63HQ0-2 AP-1 complex-associated regulatory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18186.18186.3 20.71 20.71 1.267 6 1 1 0 971.3936 2816.2002 T204t M216m TMT10 196 (K) STSGNDDStSLDLEWEDEEGmNR (M) S(0.0)T(0.0)S(0.0)GNDDS(0.0)T(0.99)S(0.0)LDLEWEDEEGM(1.0)NR t:Phosphorylated T,m:Oxidized methionine AP1AR 34622.2 3 2 3217.1 57.07 HUMAN 1 -0.9054 7.7143 TSGNSSNSPNAEVMA-p Q5U623;S488-p TSGNSSNSPNAEVMA 0.974078433477375 0.050454433623152 -0.00600000000000001 0.266333333333333 0.22331029485548 17.3286045364445 -0.00600000000000001 0.266333333333333 0.949880496360781 0.0184986291655903 -0.0658252783936601 3.32504401829973 Q5U623 ATF7IP2 Q5U623.S488.p_ATF7IP2 Q5U623_S488s _1_1_488_488 Q5U623 Q5U623|B4DKH3 Activating transcription factor 7-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17299.17299.3 18.59 18.59 2.735 5 1 1 0 824.7444 2392.2542 S488s TMT10 480 (K) ITSGNSSNsPNAEVMAVQK (K) IT(0.0)S(0.0)GNS(0.0)S(0.0)NS(0.99)PNAEVMAVQK K:TMT10,s:Phosphorylated S ATF7IP2 76847 3 3 2630.1 76.18 HUMAN 1 -0.2233 17.3286 TSGNTIESPLHENIS-p Q8N302;S344-p TSGNTIESPLHENIS 0.332753663451396 0.0219123625880129 -0.377333333333333 0.504666666666667 8.92196806056738 22.676514306753 -0.377333333333333 0.504666666666667 0.128174960992409 0.00539943813240768 -1.79485509088187 4.47345010030419 Q8N302 AGGF1 Q8N302.S344.p_AGGF1 Q8N302_S344s _1_1_344_344 Q8N302 Q8N302 Angiogenic factor with G patch and FHA domains 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19722.19722.5 23.09 23.09 2.781 9 1 1 0 760.5939 3718.9743 S344s TMT10 333 (K) VTVPTSGNTIEsPLHENISNSTSFKDEK (I) VT(0.0)VPT(0.0)S(0.0)GNT(0.0)IES(0.99)PLHENIS(0.0)NS(0.0)T(0.0)S(0.0)FKDEK K:TMT10,s:Phosphorylated S AGGF1 81375.2 3 5 1509.1 135.25 HUMAN 1 -8.922 22.6765 TSGRAEASPNDTAGA-p I3L2J0;S1609-p TSGRAEASPNDTAGA 0.593565145731771 0.877759186403782 -0.0766666666666667 0.0366666666666667 4.17803138039897 0.795778778078115 -0.0766666666666667 0.0366666666666666 0.382117442144484 0.832572615444463 -0.951011124157743 0.221815550607734 I3L2J0 NotFound I3L2J0.S1609.p_NotFound I3L2J0_S1609s _1_1_1609_1609 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4757.4757.2 13.55 13.55 1.647 2 1 1 0 734.8349 1388.6967 S1609s TMT10 1606 (R) AEAsPNDTAGAR (T) AEAS(0.99)PNDT(0.0)AGAR s:Phosphorylated S CIC 259056.7 1 26 23.1 999.57 HUMAN 1 -4.178 0.7958 TSGSKRNSVDTATSS-p P13807;S710-p TSGSKRNSVDTATSS 0.960738423014662 0.00548695249958143 0.0123333333333333 0.982 0.333711991828098 32.7911055891621 0.0123333333333333 0.982 0.926037983967694 0.000525883374528113 0.0972373554986564 7.31533261868487 P13807 GYS1 P13807.S710.p_GYS1 P13807_S710s _1_1_710_710 P13807 P13807 Glycogen [starch] synthase, muscle HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15912.15912.3 13.62 13.62 3.07 13 1 1 0 1139.2078 3335.64 S710s TMT10 708 (K) RNsVDTATSSSLSTPSEPLSPTSSLGEERN (-) RNS(0.99)VDT(0.0)AT(0.0)S(0.0)S(0.0)S(0.0)LS(0.0)T(0.0)PS(0.0)EPLS(0.0)PT(0.0)S(0.0)S(0.0)LGEERN s:Phosphorylated S GYS1 84582.8 1 5 1394.1 146.91 HUMAN 1 0.3337 32.7911 TSHTEPVSPIPKPLP-p O95104;S656-p TSHTEPVSPIPKPLP 0.145152146047681 0.0251580961035514 -0.351666666666667 0.307666666666667 17.1030428412233 21.7619129134189 -0.351666666666667 0.307666666666667 0.019484789389479 0.00666513129115686 -3.28295760138803 4.26325071679618 O95104 SCAF4 O95104.S656.p_SCAF4 O95104_S656s _1_1_656_656 O95104 O95104|O95104-3|O95104-2 Splicing factor, arginine/serine-rich 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11786.11786.4 23.19 23.19 4.07 4 1 1 0 846.6933 3303.7788 S656s TMT10 636 (K) KPENEVAQNGGAETSHTEPVsPIPK (P) KPENEVAQNGGAET(0.0)S(0.0)HT(0.0)EPVS(0.99)PIPK K:TMT10,s:Phosphorylated S SCAF4 126208.6 4 3 1368.1 149.4 HUMAN 1 -17.103 21.7619 TSIDSVRSVLAKNKV-p Q5T2T1;S454-p TSIDSVRSVLAKNKV 0.620744930399575 0.183583977555819 0.2545 0.5825 3.84979925420107 9.68179159407344 0.2545 0.5825 0.412116568097754 0.107602123125568 0.905101426356629 2.01354584602116 Q5T2T1 MPP7 Q5T2T1.S454.p_MPP7 Q5T2T1_S454s _1_1_454_454 Q5T2T1 Q5T2T1|Q5T2T1-2 MAGUK p55 subfamily member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22130.22130.3 12.32 12.32 1.111 6 1 1 0 809.0878 2345.2865 S454s TMT10 442 (K) NNYYGTSIDSVRsVLAK (N) NNY(0.0)Y(0.0)GT(0.0)S(0.0)IDS(0.0)VRS(0.99)VLAK K:TMT10,s:Phosphorylated S MPP7 65693.7 1 6 1298.1 156.56 HUMAN 1 3.8498 9.6818 TSIKRKLSAELAGNH-p O95069;S366-p TSIKRKLSAELAGNH 0.571899718766607 0.0364919816657141 0.109666666666667 -0.315333333333333 4.4697362081259 19.3447960232799 0.109666666666667 -0.315333333333333 0.357294539678838 0.0116284116531846 1.0059208238454 -3.7363750696571 O95069 KCNK2 O95069.S366.p_KCNK2 O95069_S366s _1_1_366_366 O95069 O95069|O95069-3|O95069-2 Potassium channel subfamily K member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10229.10229.3 18.66 18.66 11.876 2 1 1 0 783.0528 2267.1764 S366s Hydrogen 364 (R) KLsAELAGNHNQELTPCR (R) KLS(0.99)AELAGNHNQELT(0.0)PCR K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S KCNK2 47377.1 11 3 1506.1 135.64 HUMAN 1 4.4697 -19.3448 TSILSYLSDSDLRGP-p Q96MK2;S384-p TSILSYLSDSDLRGP 0.791634956034985 0.544867362526116 -0.0373333333333333 -0.0706666666666667 1.95876608704448 3.54677631954509 -0.0373333333333334 -0.0706666666666667 0.636976472292253 0.441898337879601 -0.49965100748527 -0.829310356668177 Q96MK2 FAM65C Q96MK2.S384.p_FAM65C Q96MK2_S384s _1_1_384_384 Q96MK2 Q96MK2|Q96MK2-2 RIPOR family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28517.28517.3 14.92 12.97 1.145 7 1 1 0 787.405 2280.2397 S384s TMT10 376 (R) ATSILSYLsDSDLRGPSLR (S) AT(0.0)S(0.0)ILS(0.0)Y(0.0)LS(0.99)DS(0.0)DLRGPS(0.0)LR s:Phosphorylated S RIPOR3 106657.4 1 2 3747.1 43.99 HUMAN 1 -1.9588 -3.5468 TSIPRAPSSDEECFF-p A0A0A0MRC4;S524-p TSIPRAPSSDEECFF 0.366009236572898 0.0987083081343399 -0.172333333333333 -0.344 8.10233213600443 13.2932478063703 -0.172333333333333 -0.344 0.154798513670395 0.0468462918125603 -1.65290797260506 -2.56260124320529 A0A0A0MRC4 NotFound A0A0A0MRC4.S524.p_NotFound A0A0A0MRC4_S524sS525s_2_2_524_525 A0A0A0MRC4 A0A0A0MRC4|Q86YR5|A0A0A0MSK4|Q86YR5-4 G-protein-signaling modulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.34558.34558.4 13.94 13.94 1.1 5 2 2 0 733.5958 2771.4326 S524s S525s TMT10 517 (R) TSIPRAPssDEECFFDLLTK (F) T(0.0)S(0.0)IPRAPS(0.99)S(0.99)DEECFFDLLT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GPSM1 78910.1 3 6 1684.1 121.22 HUMAN 1 -8.1023 -13.2932 TSISDFLSEEDDIVP-p Q4AC94;S466-p TSISDFLSEEDDIVP 0.213755987691511 0.2553286116758 0.248 -0.169666666666667 12.9162796611511 7.80985142939622 0.248 -0.169666666666667 0.0510942506179752 0.165582660774231 2.49599185497561 -1.60166165021975 Q4AC94 C2CD3 Q4AC94.S466.p_C2CD3 Q4AC94_S466s _1_1_466_466 Q4AC94 Q4AC94|Q4AC94-3|Q4AC94-1|Q4AC94-4|Q4AC94-2 C2 domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26062.26062.3 18.09 14.66 3.847 6 1 1 0 993.8402 2899.5391 S466s TMT10 457 (K) SDTSISDFLsEEDDIVPSKK (I) S(0.0)DT(0.0)S(0.0)IS(0.0)DFLS(0.99)EEDDIVPS(0.0)KK K:TMT10,s:Phosphorylated S C2CD3 262780.3 4 3 722.1 237.14 HUMAN 1 12.9163 -7.8099 TSISEPPSPISPYAS-p Q9NZJ0;S623-p TSISEPPSPISPYAS 0.659595024833796 0.00219928027114295 0.0716666666666667 -0.854666666666667 3.38998888673966 41.2452006484455 0.0716666666666667 -0.854666666666667 0.458143059065734 7.50723369139342e-05 0.798568968196583 -10.705864911861 Q9NZJ0 DTL Q9NZJ0.S623.p_DTL Q9NZJ0_S619sS623s_2_2_619_623 Q9NZJ0 Q9NZJ0|F5GZ90 Denticleless protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27093.27093.4 20.07 20.07 3.337 12 2 2 0 1366.9193 5304.7045 S619s S623s TMT10 608 (K) SSKIEGAGTSIsEPPsPISPYASESCGTLPLPLRPCGEGSEMVGK (E) S(0.0)S(0.0)KIEGAGT(0.0)S(0.0)IS(0.99)EPPS(0.99)PIS(0.0)PY(0.0)AS(0.0)ES(0.0)CGT(0.0)LPLPLRPCGEGS(0.0)EMVGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DTL 80892.7 8 18 461.1 305.23 HUMAN 1 3.39 -41.2452 TSITDAKSCEGQNPE-p Q9NQW6;S308-p TSITDAKSCEGQNPE 0.238996525681592 0.00407646439511626 0.177666666666667 -0.663666666666667 11.8848390766742 35.198752278133 0.177666666666667 -0.660426571629539 0.0647912102536441 0.000302081947288029 2.31192478018991 -8.16766982395916 Q9NQW6 ANLN Q9NQW6.S308.p_ANLN Q9NQW6_S308s _1_1_308_308 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17863.17863.4 14.5 12.98 2.225 6 1 1 0 761.648 2963.5963 S308s TMT10 299 (K) STTSITDAKsCEGQNPELLPK (T) S(0.0)T(0.0)T(0.0)S(0.0)IT(0.0)DAKS(0.99)CEGQNPELLPK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ANLN 125566 1 21 68.1 675.08 HUMAN 1 11.8848 -35.1988 TSITVHDSESDDEED-p Q6PIJ6;S598-p TSITVHDSESDDEED 0.512739424025493 0.731423780469014 0.089 0.0333333333333333 5.36197327707703 1.87250116062841 0.089 0.0333333333333333 0.290939489387313 0.649755379661724 1.16999735622615 0.480323157761373 Q6PIJ6 FBXO38 Q6PIJ6.S598.p_FBXO38 Q6PIJ6_S598sS600s_2_2_598_600 Q6PIJ6 Q6PIJ6|Q6PIJ6-2|Q6PIJ6-3 F-box only protein 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.29709.29922.5 22.34 19.05 4.243 6 2 2 0 855.2231 4112.153 S598s S600s TMT10 587 (R) VVKPTSITVHDsEsDDEEDSLELQEVWIPK (N) VVKPT(0.0)S(0.0)IT(0.0)VHDS(0.99)ES(0.99)DDEEDS(0.0)LELQEVWIPK K:TMT10,s:Phosphorylated S FBXO38 135824.2 6 5 2435.1 83.55 HUMAN 1 5.362 1.8725 TSKDRPVSQPSLVGS-p Q9H4A3-7;S167-p TSKDRPVSQPSLVGS 0.886118944763575 0.211447430328884 0.0246666666666667 -0.126333333333333 1.02564959975218 8.87713995902729 0.0246666666666667 -0.126333333333333 0.789650727870967 0.129504841322993 0.28030004185365 -1.78646230788773 Q9H4A3 WNK1 Q9H4A3.7.S167.p_WNK1 Q9H4A3-7_S167s _1_1_167_167 Q9H4A3-7 Q9H4A3-7|Q9H4A3-6|Q9H4A3-5|Q9H4A3-2|F5GWT4|F6UYG0 Isoform 6 of Serine/threonine-protein kinase WNK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11586.11586.3 12.98 12.98 2.979 3 1 1 0 636.6831 1828.0693 S167s TMT10 163 (K) DRPVsQPSLVGSK (E) DRPVS(0.99)QPS(0.0)LVGS(0.0)K K:TMT10,s:Phosphorylated S WNK1 301202.7 8 4 162.1 495.27 HUMAN 1 1.0256 -8.8771 TSKESVNSPVFGKAS-p E7ESJ3;S647-p TSKESVNSPVFGKAS 0.84304508984975 0.406566355392913 0.0396666666666667 0.122666666666667 1.43443777331196 5.20258101232338 0.0396666666666667 0.122666666666667 0.718714195286065 0.301815749614998 0.379562490046326 1.14081729574833 E7ESJ3 NotFound E7ESJ3.S647.p_NotFound E7ESJ3_S647s _1_1_647_647 E7ESJ3 E7ESJ3|Q9UPS8-3|Q9UPS8-2 Ankyrin repeat domain-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15213.15213.2 13.41 13.41 3.117 2 1 1 0 801.4192 1521.8677 S647s TMT10 643 (K) ESVNsPVFGK (A) ES(0.0)VNS(0.99)PVFGK K:TMT10,s:Phosphorylated S ANKRD26 199524.4 3 8 812.1 221.02 HUMAN 1 1.4344 5.2026 TSKGEQVSQNGLPAE-p A0A087WUZ3;S2130-p TSKGEQVSQNGLPAE 0.213229385106179 0.292614269426701 0.186333333333333 0.105 12.9436659770331 7.0457681390171 0.186333333333333 0.105 0.0507730674780588 0.197434564493533 2.50092077217377 1.46861392178668 A0A087WUZ3 NotFound A0A087WUZ3.S2130.p_NotFound A0A087WUZ3_S2130s_1_1_2130_2130 A0A087WUZ3 A0A087WUZ3|Q01082|Q01082-2|Q01082-3 Spectrin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14955.15519.4 24.3 24.3 1.797 6 1 1 0 1007.2259 3944.9263 S2130s N2132n TMT10 2111 (K) VSEEAESQQQWDTSKGEQVsQnGLPAEQGSPR (M) VS(0.0)EEAES(0.0)QQQWDT(0.0)S(0.0)KGEQVS(0.99)QN(1.0)GLPAEQGS(0.0)PR K:TMT10,s:Phosphorylated S,n:Deamidated SPTBN1 275623.3 3 12 233.1 420.49 HUMAN 1 12.9437 7.0458 TSKLVLVSPTSEQYD-p O00178;S69-p TSKLVLVSPTSEQYD 0.605634492207637 0.871210531856021 0.0753333333333333 -0.02 4.02569027516079 0.843572010361824 0.0753333333333333 -0.02 0.395759157191608 0.823460551812974 0.922037147244383 -0.234143722985289 O00178 GTPBP1 O00178.S69.p_GTPBP1 O00178_S69s _1_1_69_69 O00178 O00178 GTP-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30010.30010.3 15.71 15.71 1.103 5 1 1 0 710.3749 2049.1429 S69s TMT10 65 (K) LVLVsPTSEQYDSLLR (Q) LVLVS(0.99)PT(0.0)S(0.0)EQY(0.0)DS(0.0)LLR s:Phosphorylated S GTPBP1 73080.2 1 4 2114.1 97.01 HUMAN 1 4.0257 -0.8436 TSKVNSVTPKKPKTS-p Q8ND82;T185-p TSKVNSVTPKKPKTS 0.104459928465907 0.00095569654612807 -0.413 -1.717 20.6825667773147 53.1405585026262 -0.413 -1.717 0.00854561498684971 4.85226096082336e-06 -4.02699202659915 -17.9709133244231 Q8ND82 ZNF280C Q8ND82.T185.p_ZNF280C Q8ND82_T185t _1_1_185_185 Q8ND82 Q8ND82 Zinc finger protein 280C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9113.9113.2 10.35 5.32 2.478 2 1 1 0 641.8625 1202.7509 T185t TMT10 181 (K) VNSVtPK (K) VNS(0.0)VT(0.99)PK K:TMT10,t:Phosphorylated T ZNF280C 84920.2 4 4 1894.1 108.64 HUMAN 1 -20.6826 -53.1406 TSKYNSHSLENESIK-p Q13496;S13-p TSKYNSHSLENESIK 0.43773303002828 0.0330017468877295 0.124 -0.274333333333333 6.60890505113846 19.9792507153276 0.124 -0.273262011587186 0.218328029390842 0.0100478913076128 1.39236501452519 -3.87088141659908 Q13496 MTM1 Q13496.S13.p_MTM1 Q13496_S13s _1_1_13_13 Q13496 Q13496|Q13496-2 Myotubularin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10956.10956.3 11.63 11.63 3.957 4 1 1 0 653.6593 1878.9962 S13s TMT10 9 (K) YNSHsLENESIK (R) Y(0.0)NS(0.0)HS(0.99)LENES(0.0)IK K:TMT10,s:Phosphorylated S MTM1 70443.9 2 1 2603.1 76.99 HUMAN 1 6.6089 -19.9793 TSLANLISPVRNGAV-p Q7Z628;S106-p TSLANLISPVRNGAV 0.884436508440204 0.0163146562394762 -0.022 -0.360333333333333 1.05322750952217 24.685801786665 -0.022 -0.360333333333333 0.784652294478224 0.00339953738362219 -0.287177207588087 -4.95854991260936 Q7Z628 NET1 Q7Z628.S106.p_NET1 Q7Z628_S106s _1_1_106_106 Q7Z628 Q7Z628|Q7Z628-2 Neuroepithelial cell-transforming gene 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27104.27104.3 10.69 10.69 7.51 3 1 1 0 526.9657 1498.9154 S106s TMT10 98 (R) VTSLANLIsPVR (N) VT(0.0)S(0.0)LANLIS(0.99)PVR s:Phosphorylated S NET1 68195.2 2 3 4067.1 38.23 HUMAN 1 -1.0532 -24.6858 TSLGEVRTPSQLSDN-p Q4G0F5;T325-p TSLGEVRTPSQLSDN 0.211309876563391 0.136844261399723 0.188 -0.373666666666667 13.0331533615764 11.382842026448 0.188 -0.373666666666667 0.0497375815060012 0.07273037006683 2.51704270082005 -2.22227877620303 Q4G0F5 VPS26B Q4G0F5.T325.p_VPS26B Q4G0F5_T325t _1_1_325_325 Q4G0F5 Q4G0F5 Vacuolar protein sorting-associated protein 26B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16358.16358.3 10.8 6.58 1.143 6 1 1 0 969.1186 2825.3686 T325t TMT10 314 (R) FEGTTSLGEVRtPSQLSDNNCRQ (-) FEGT(0.0)T(0.0)S(0.0)LGEVRT(0.99)PS(0.0)QLS(0.0)DNNCRQ C:Carbamidomethylation,t:Phosphorylated T VPS26B 39268 1 3 3476.1 50.1 HUMAN 1 13.0332 -11.3828 TSLKVSNSPEPQKAV-p O60271;S251-p TSLKVSNSPEPQKAV 0.117095640514477 0.00554351977683076 0.873333333333333 -0.889666666666667 19.3878546715692 32.706204883159 0.873333333333333 -0.889666666666667 0.0115136900189626 0.000536265072314367 3.74879152542149 -7.28671664495586 O60271 SPAG9 O60271.S251.p_SPAG9 O60271_S251s _1_1_251_251 O60271 O60271|O60271-3 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16562.16562.3 23.72 20.79 2.301 5 1 1 0 1171.2534 3431.7745 S251s TMT10 248 (K) VSNsPEPQKAVEQEDELSDVSQGGSK (A) VS(0.0)NS(0.99)PEPQKAVEQEDELS(0.0)DVS(0.0)QGGS(0.0)K K:TMT10,s:Phosphorylated S SPAG9 147001.6 4 18 84.1 629.25 HUMAN 1 19.3879 -32.7062 TSLLGGGSPKNNTAA-p Q6KC79-2;S2658-p TSLLGGGSPKNNTAA 0.168210601929357 0.272266129080656 0.584666666666667 -0.257333333333333 15.4506965605065 7.44153799491068 0.584666666666667 -0.257333333333333 0.0285056103224971 0.180237933966707 2.96341486756172 -1.53764993892337 Q6KC79 NIPBL Q6KC79.2.S2658.p_NIPBL Q6KC79-2_S2658s _1_1_2658_2658 Q6KC79-2 Q6KC79-2 Isoform 2 of Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18420.18420.4 15.33 10.86 2 8 1 1 0 1040.4979 4078.9801 S2658s TMT10 2649 (K) AITSLLGGGsPKNNTAAETEDDESDGEDRGGGTSGVR (R) AIT(0.0)S(0.0)LLGGGS(0.99)PKNNT(0.0)AAET(0.0)EDDES(0.0)DGEDRGGGT(0.0)S(0.0)GVR K:TMT10,s:Phosphorylated S NIPBL 306278.3 1 42 50.2 752.87 HUMAN 1 15.4507 -7.4415 TSLMSAESPTPRSCQ-p B1AP22;S58-p TSLMSAESPTPRSCQ 0.99162842482097 0.116522799853761 0.00199999999999999 0.203666666666667 0.0771803422377551 12.3157999358188 0.00199999999999999 0.203666666666667 0.982385550022373 0.0586705293227194 0.0231168939963404 2.38724900023256 B1AP22 NotFound B1AP22.S58.p_NotFound B1AP22_S58s _1_1_58_58 B1AP22 B1AP22|P49810|P49810-3|P49810-2 Presenilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12322.12322.2 15.01 10.83 1.846 5 1 1 0 793.378 1505.7831 S58s TMT10 51 (R) TSLMSAEsPTPR (S) T(0.0)S(0.0)LMS(0.0)AES(0.99)PT(0.0)PR s:Phosphorylated S PSEN2 54359.3 6 1 5960.1 15.01 HUMAN 1 0.0772 12.3158 TSLPPLWSPEAERSH-p P49790-3;S209-p TSLPPLWSPEAERSH 0.454180425050792 0.420407827165053 0.103666666666667 -0.0916666666666667 6.32323102049014 5.00996921588745 0.103666666666667 -0.0916666666666667 0.233172268519033 0.315502698708535 1.34194671057632 -1.10566086251856 P49790 NUP153 P49790.3.S209.p_NUP153 P49790-3_S209s _1_1_209_209 P49790-3 P49790-3|P49790-2 Isoform 3 of Nuclear pore complex protein Nup153 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23429.23429.2 15.96 15.96 4.506 3 1 1 0 953.4699 1825.9646 S209s TMT10 201 (K) NTSLPPLWsPEAER (S) NT(0.0)S(0.0)LPPLWS(0.99)PEAER s:Phosphorylated S NUP153 158989.2 4 5 64.1 696.53 HUMAN 1 6.3232 -5.01 TSLQRSQSNPILGSP-p Q9NYL2;S593-p TSLQRSQSNPILGSP 0.404135615042513 0.10988033291554 0.119333333333333 0.174333333333333 7.26715357279476 12.666428850039 0.119333333333333 0.174333333333333 0.187622380868397 0.0541199161423476 1.50770075439693 2.44982623683836 Q9NYL2 ZAK Q9NYL2.S593.p_ZAK Q9NYL2_S593s _1_1_593_593 Q9NYL2 Q9NYL2 Mitogen-activated protein kinase kinase kinase 20 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29822.29822.3 15.05 15.05 1.346 6 1 1 0 1036.4913 3027.4798 S593s TMT10 591 (R) SQsNPILGSPFFSHFDGQDSYAAAVR (R) S(0.0)QS(0.99)NPILGS(0.0)PFFS(0.0)HFDGQDS(0.0)Y(0.0)AAAVR s:Phosphorylated S MAP3K20 91781 2 5 1239.1 162.96 HUMAN 1 7.2672 12.6664 TSLRERGSDASGQLF-p P19174-2;S1234-p TSLRERGSDASGQLF 0.779845828140554 0.898912157702689 0.0436666666666667 0.0176666666666667 2.07565929516929 0.648769839643567 0.0436666666666667 0.0176666666666667 0.62006050616302 0.861237667418516 0.525492895640031 0.183279327045541 P19174 PLCG1 P19174.2.S1234.p_PLCG1 P19174-2_S1234s _1_1_1234_1234 P19174-2 P19174-2 Isoform 2 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6508.6508.3 10.31 10.31 2.487 2 1 1 0 609.2921 1745.8881 S1234s TMT10 1231 (R) ERGsDASGQLFHGR (A) ERGS(0.99)DAS(0.0)GQLFHGR s:Phosphorylated S PLCG1 149969.8 1 6 1779.1 115.42 HUMAN 1 2.0757 0.6488 TSLSGSDSETEGKQH-p Q8N1G2;S55-p TSLSGSDSETEGKQH 0.27414666518586 0.00381834363219887 -0.277666666666667 0.577833333333333 10.6434260263813 35.8295887402194 -0.277666666666667 0.577833333333334 0.0862298036842507 0.000261240872751048 -2.09375161688706 8.40468513644941 Q8N1G2 CMTR1 Q8N1G2.S55.p_CMTR1 Q8N1G2_S53sS55s_2_2_53_55 Q8N1G2 Q8N1G2 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11843.11843.2 12.77 12.77 1.418 8 2 2 0 1087.9797 2015.0181 S53s S55s TMT10 45 (K) ASTTSLSGsDsETEGK (Q) AS(0.0)T(0.0)T(0.0)S(0.0)LS(0.0)GS(0.99)DS(0.99)ET(0.0)EGK K:TMT10,s:Phosphorylated S CMTR1 96231.9 3 4 2841.1 68.37 HUMAN 2 -10.6434 35.8296 TSLSRRGSIDSPKSY-p P15822;S779-p TSLSRRGSIDSPKSY 0.894048637466895 0.935025968158778 0.0196666666666667 0.00866666666666669 0.949706102473471 0.411604053179194 0.0196666666666667 0.0086666666666667 0.803580500571804 0.909577261047544 0.261214713448696 0.11897724495394 P15822 HIVEP1 P15822.S779.p_HIVEP1 P15822_S779s _1_1_779_779 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5475.5475.3 7.97 4.29 3.423 2 1 1 0 466.5901 1317.7891 S779s TMT10 777 (R) RGsIDSPK (S) RGS(0.99)IDS(0.0)PK K:TMT10,s:Phosphorylated S HIVEP1 299483.8 3 11 82.1 631.69 HUMAN 1 0.9497 0.4116 TSLVPPLSPQPKIVT-p C9K0J5;S662-p TSLVPPLSPQPKIVT 0.844490429219358 0.00928219469762559 0.0286666666666667 -0.429333333333333 1.41934650970296 28.700107887088 0.0286666666666667 -0.429333333333333 0.721215993616327 0.00134892937217981 0.375993800513749 -6.03714539876295 C9K0J5 RAPH1 C9K0J5.S662.p_RAPH1 C9K0J5_S662s _1_1_662_662 C9K0J5 C9K0J5|Q70E73 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23217.23217.3 14.04 7.64 13.444 5 1 1 0 937.4844 2730.4723 S662s TMT10 647 (R) MESMNRPYTSLVPPLsPQPK (I) MES(0.0)MNRPY(0.0)T(0.0)S(0.0)LVPPLS(0.99)PQPK K:TMT10,s:Phosphorylated S RAPH1 141861.7 4 3 619.1 260.34 HUMAN 1 1.4193 -28.7001 TSNLEKSSQEQLLDA-p Q2LD37;S4613-p TSNLEKSSQEQLLDA 0.910912795817508 0.24780114457419 -0.0173333333333333 0.172 0.79463288479284 7.98368000611777 -0.0173333333333334 0.172 0.832792320110955 0.159086013609769 -0.221540058779108 1.63181327961013 Q2LD37 KIAA1109 Q2LD37.S4613.p_KIAA1109 Q2LD37_S4613s _1_1_4613_4613 Q2LD37 Q2LD37|Q2LD37-4 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7944.7944.3 17.45 17.45 1.12 2 1 1 0 600.9592 1720.8928 S4613s TMT10 4612 (K) SsQEQLLDAAHHR (H) S(0.0)S(0.99)QEQLLDAAHHR s:Phosphorylated S KIAA1109 559693.9 5 31 143.1 520.8 HUMAN 1 -0.7946 7.9837 TSPAKARSPINRRGS-p Q9NZJ0;S478-p TSPAKARSPINRRGS 0.354856925059928 0.00203690866710184 0.129666666666667 -2.58366666666667 8.36095769222028 41.9455824382693 0.129666666666667 -2.58366666666667 0.145849260271441 6.38913046099901e-05 1.6977265142287 -11.0420372294477 Q9NZJ0 DTL Q9NZJ0.S478.p_DTL Q9NZJ0_S478s _1_1_478_478 Q9NZJ0 Q9NZJ0|F5GZ90 Denticleless protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3379.3379.3 8.46 8.46 99 1 1 1 0 374.8709 1042.6319 S478s TMT10 476 (K) ARsPINR (R) ARS(1.0)PINR s:Phosphorylated S DTL 80892.7 2 6 461.1 305.23 HUMAN 1 8.361 -41.9456 TSPARLGSQHSPGRT-p Q8IZP0-9;S222-p TSPARLGSQHSPGRT 0.474960924415695 0.426639300867959 -0.126666666666667 0.156333333333333 5.95378988481631 4.92444747967713 -0.126666666666667 0.156333333333333 0.253875628473903 0.321777187965792 -1.27632724858566 1.08997686474617 Q8IZP0 ABI1 Q8IZP0.9.S222.p_ABI1 Q8IZP0-9_S222s _1_1_222_222 Q8IZP0-9 Q8IZP0|Q8IZP0-12|Q8IZP0-2|Q8IZP0-7|Q8IZP0-8|B6VEX4|Q8IZP0-10|Q8IZP0-11|Q8IZP0-9|Q8IZP0-6|Q8IZP0-5|A0A0A0MRT6|Q8IZP0-3|Q8IZP0-4 Isoform 9 of Abl interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4138.4138.2 13.4 6.31 3.191 2 1 1 0 624.3084 1167.6432 S222s TMT10 220 (R) LGsQHSPGR (T) LGS(0.99)QHS(0.0)PGR s:Phosphorylated S ABI1 52580.9 4 5 1517.1 134.48 HUMAN 1 -5.9538 4.9244 TSPDLEKSCD_____-p Q86VG3;S219-p TSPDLEKSCD_____ 0.568417101345875 0.0363715867017224 0.167666666666667 -0.576333333333333 4.5142349135652 19.3693693992771 0.167666666666667 -0.576333333333333 0.353652317714861 0.0115628012324465 1.01423561492287 -3.74153720072314 Q86VG3 C11orf74 Q86VG3.S219.p_C11orf74 Q86VG3_S219s _1_1_219_219 Q86VG3 Q86VG3|Q86VG3-2 Uncharacterized protein C11orf74 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7357.7357.4 8.39 5.6 8.392 3 1 1 0 580.2971 2238.2003 S219s TMT10 209 (K) RKDTSPDLEKsCD (-) RKDT(0.0)S(0.0)PDLEKS(0.99)CD K:TMT10,C:Carbamidomethylation,s:Phosphorylated S C11orf74 25749.2 1 3 3785.1 43.1 HUMAN 1 4.5142 -19.3694 TSPDPRLSPSFRARP-p Q15735;S278-p TSPDPRLSPSFRARP 0.175458928500627 0.555380414278918 0.383333333333333 0.0896666666666667 15.0393009051302 3.44118552907124 0.383333333333333 0.0896666666666667 0.0313379013788255 0.452773965629863 2.88582534515574 0.808558494746403 Q15735 INPP5J Q15735.S278.p_INPP5J Q15735_S278s _1_1_278_278 Q15735 Q15735|B4DF95 Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16622.16622.5 23.84 17.57 1.177 9 1 1 0 977.0862 4801.4318 S278s TMT10 239 (R) DAPAPRPLPASEGHLQPPAQTSGPTGSPPCIQTSPDPRLsPSFR (A) DAPAPRPLPAS(0.0)EGHLQPPAQT(0.0)S(0.0)GPT(0.0)GS(0.0)PPCIQT(0.0)S(0.0)PDPRLS(0.99)PS(0.0)FR C:Carbamidomethylation,s:Phosphorylated S INPP5J 107651.3 1 2 1357.1 150.44 HUMAN 1 15.0393 3.4412 TSPGRQMSQQNLTKQ-p P25054;S2374-p TSPGRQMSQQNLTKQ 0.794042650833067 0.00393784090484211 -0.044 -0.767333333333333 1.93368275702439 35.4667896874653 -0.044 -0.767333333333333 0.640666070225248 0.000284001759877289 -0.4940650051541 -8.26765223326175 P25054 APC P25054.S2374.p_APC P25054_S2374s _1_1_2374_2374 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10188.10188.2 13.27 13.27 5.441 2 1 1 0 808.4155 1535.8616 S2374s TMT10 2372 (R) QMsQQNLTK (Q) QMS(0.99)QQNLT(0.0)K K:TMT10,s:Phosphorylated S APC 313808.5 1 39 33.1 890.71 HUMAN 1 -1.9337 -35.4668 TSPKYSPTSPKYSPT-p P24928;T1870-p TSPKYSPTSPKYSPT 0.776758299864296 0.0305140104862788 0.0443333333333333 -0.379666666666667 2.10517851941294 20.4795283965709 0.0443333333333333 -0.379666666666667 0.615860213282885 0.0089546199911778 0.531970610947508 -3.97878888234536 P24928 POLR2A P24928.T1870.p_POLR2A P24928_T1870t _1_1_1870_1870 P24928 P24928 DNA-directed RNA polymerase II subunit RPB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12265.12265.3 12.11 12.11 1.144 8 1 1 0 769.7463 2227.2577 T1870t TMT10 1860 (K) YSPTSPKYSPtSPK (Y) Y(0.0)S(0.0)PT(0.0)S(0.0)PKY(0.0)S(0.0)PT(0.99)S(0.0)PK K:TMT10,t:Phosphorylated T POLR2A 218541.6 3 5 920.1 200.24 HUMAN 1 2.1052 -20.4795 TSPNLDVSLPSMEVD-p Q8IVF2;S4425-p TSPNLDVSLPSMEVD 0.757838648247001 0.012460104248406 -0.048 -0.375 2.30534329530435 26.5764335733912 -0.048 -0.375 0.588119623410726 0.00219966549676384 -0.575408803869914 -5.44707791014927 Q8IVF2 AHNAK2 Q8IVF2.S4425.p_AHNAK2 Q8IVF2_S4425s _1_1_4425_4425 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32197.32197.3 19.53 18.88 1.249 4 1 1 0 1045.5447 3054.6433 S4425s TMT10 4415 (K) VEVTSPNLDVsLPSMEVDIQAPGAK (L) VEVT(0.0)S(0.0)PNLDVS(0.99)LPS(0.0)MEVDIQAPGAK K:TMT10,s:Phosphorylated S AHNAK2 617759.6 1 19 237.1 418.35 HUMAN 1 -2.3053 -26.5764 TSPPPEKSGDEGSED-p Q9H1E3;S229-p TSPPPEKSGDEGSED 0.248800244327827 0.00627124365275306 -0.277666666666667 0.492666666666667 11.5274965174894 31.7243616424973 -0.277666666666667 0.492666666666667 0.0703477721457884 0.0006723011215403 -2.24879488407506 6.96253124650404 Q9H1E3 NUCKS1 Q9H1E3.S229.p_NUCKS1 Q9H1E3_S229s _1_1_229_229 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7615.7615.4 19.27 19.27 1.126 7 1 1 0 825.8876 3220.5584 S229s TMT10 219 (K) KTSTSPPPEKsGDEGSEDEAPSGED (-) KT(0.0)S(0.0)T(0.0)S(0.0)PPPEKS(0.99)GDEGS(0.0)EDEAPS(0.0)GED K:TMT10,s:Phosphorylated S NUCKS1 27295.9 3 18 48.1 767.83 HUMAN 1 -11.5275 31.7244 TSPRVPLSAYERVSG-p Q9UQ35;S2388-p TSPRVPLSAYERVSG 0.279760144591425 0.00647614443148122 0.159666666666667 0.955666666666667 10.4571222620525 31.4715772074314 0.159666666666667 0.955666666666667 0.0900093807415488 0.000712594193550974 2.06125235475371 6.88103571020714 Q9UQ35 SRRM2 Q9UQ35.S2388.p_SRRM2 Q9UQ35_S2388s _1_1_2388_2388 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16404.16404.2 8.36 3.23 5.429 2 1 1 0 622.3192 1163.6622 S2388s TMT10 2385 (R) VPLsAYER (V) VPLS(0.99)AY(0.0)ER s:Phosphorylated S SRRM2 300351.7 1 154 2.1 3310.34 HUMAN 1 10.4571 31.4716 TSPSKPKSPGVEKPI-p Q76L83;S530-p TSPSKPKSPGVEKPI 0.149081489852703 0.00351326223614904 -0.423 0.895666666666667 16.672103976564 36.682990743203 -0.423 0.895666666666667 0.0215173905388699 0.00021463518925743 -3.19832891306235 8.73492367432759 Q76L83 ASXL2 Q76L83.S530.p_ASXL2 Q76L83_S530s _1_1_530_530 Q76L83 Q76L83|E7EWD6|Q76L83-2 Putative Polycomb group protein ASXL2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25086.25086.5 24.34 19.08 1.207 6 1 1 0 1034.7777 5089.8832 S530s TMT10 530 (K) sPGVEKPIVKPTAGAGPQETNMKEPLATLVDQSPESLK (R) S(0.99)PGVEKPIVKPT(0.0)AGAGPQET(0.0)NMKEPLAT(0.0)LVDQS(0.0)PES(0.0)LK K:TMT10,s:Phosphorylated S ASXL2 155129.4 2 7 293.1 380.51 HUMAN 1 -16.6721 36.683 TSPVAKISPGATLPE-p Q8NC74;S196-p TSPVAKISPGATLPE 0.568417101345875 0.839840675273549 0.096 0.032 4.51554266971867 1.06604712270265 0.096 0.032 0.353545841259866 0.782339553285763 1.01447974033948 0.290335716748103 Q8NC74 RBBP8NL Q8NC74.S196.p_RBBP8NL Q8NC74_S196s _1_1_196_196 Q8NC74 Q8NC74 RBBP8 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14578.14578.3 14.15 14.15 4.617 3 1 1 0 479.5831 1356.7684 S196s TMT10 195 (K) IsPGATLPESR (A) IS(0.99)PGAT(0.0)LPES(0.0)R s:Phosphorylated S RBBP8NL 71886.7 2 5 565.1 270.89 HUMAN 1 4.5155 1.066 TSPVGPPTPPPAPTD-p J3KQR7;T543-p TSPVGPPTPPPAPTD 0.255264993053251 0.180277282651787 -0.165333333333333 0.153666666666667 11.2774372090376 9.78759731554855 -0.165333333333333 0.153666666666667 0.0745171573232457 0.105012323662119 -2.20478718094954 1.94406395504575 J3KQR7 NotFound J3KQR7.T543.p_NotFound J3KQR7_T543t _1_1_543_543 J3KQR7 J3KQR7|Q9Y4F5 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28212.28212.5 11.15 11.15 1.51 6 1 1 0 763.2219 3732.114 T543t TMT10 523 (K) VPPVLPAPLTPHGTSPVGPPtPPPAPTDPQLTK (A) VPPVLPAPLT(0.0)PHGT(0.0)S(0.0)PVGPPT(0.99)PPPAPT(0.0)DPQLT(0.0)K K:TMT10,t:Phosphorylated T CEP170B 172326.6 1 9 51.1 746.11 HUMAN 1 -11.2774 9.7876 TSPVRRLSSGKADGH-p O75962;S1785-p TSPVRRLSSGKADGH 0.826328235011399 0.528325994179065 0.0343333333333333 -0.108 1.59836699034638 3.72558109984121 0.0343333333333333 -0.108 0.692091158218602 0.424074237631252 0.417898721828994 -0.864157610185426 O75962 TRIO O75962.S1785.p_TRIO O75962_S1785s _1_1_1785_1785 O75962 O75962|O75962-4|O75962-2|O75962-5 Triple functional domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5686.5686.5 10.5 10.5 1.16 2 1 1 0 476.6874 2299.438 S1785s TMT10 1783 (R) RLsSGKADGHVKK (L) RLS(0.99)S(0.0)GKADGHVKK K:TMT10,s:Phosphorylated S TRIO 349974.9 1 11 450.1 308.79 HUMAN 1 1.5984 -3.7256 TSPVTSISPIQASEK-p Q7Z589-4;S1137-p TSPVTSISPIQASEK 0.374814805489608 0.56139328956448 -0.143 -0.0553333333333333 7.89090991118777 3.37959157009633 -0.143 -0.0553333333333333 0.162520821491371 0.459241199897093 -1.61623053908517 -0.796391056208559 Q7Z589 C11orf30 Q7Z589.4.S1137.p_C11orf30 Q7Z589-4_S1137s _1_1_1137_1137 Q7Z589-4 Q7Z589-7|Q7Z589-4|Q7Z589-5|Q7Z589-6 Isoform 4 of BRCA2-interacting transcriptional repressor EMSY HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23067.23067.2 18.16 18.16 1.227 6 1 1 0 1098.6011 2116.2266 S1137s TMT10 1129 (K) LTSPVTSIsPIQASEK (T) LT(0.0)S(0.0)PVT(0.0)S(0.0)IS(0.99)PIQAS(0.0)EK K:TMT10,s:Phosphorylated S EMSY 142030.9 1 10 879.1 207.7 HUMAN 1 -7.8909 -3.3796 TSQGIPTSDEESTPK-p Q9NQS7;S214-p TSQGIPTSDEESTPK 0.756709311612952 0.0072868134525058 0.0446666666666667 -0.468 2.31834514842759 30.5730020323293 0.0446666666666667 -0.468 0.586361551300615 0.000876394809511081 0.578202119669538 -6.59765134322188 Q9NQS7 INCENP Q9NQS7.S214.p_INCENP Q9NQS7_T213tS214s_2_2_213_214 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17325.17325.4 17.75 17.75 1.125 11 2 2 0 912.4588 3486.8782 T213t S214s TMT10 195 (R) TLSPTPASATAPTSQGIPtsDEESTPKK (S) T(0.0)LS(0.0)PT(0.0)PAS(0.0)AT(0.0)APT(0.0)S(0.0)QGIPT(0.99)S(0.99)DEES(0.0)T(0.0)PKK K:TMT10,t:Phosphorylated T,s:Phosphorylated S INCENP 105826.3 16 26 138.1 524.38 HUMAN 1 2.3183 -30.573 TSQGSINSPVYSRHS-p O14639;S458-p TSQGSINSPVYSRHS 0.0419889834218097 0.90345905210967 0.56 -0.0203333333333333 30.7191281648356 0.614774207542273 0.56 -0.0203333333333333 0.000847397509969113 0.86800570428679 6.65393893653087 -0.174229642458698 O14639 ABLIM1 O14639.S458.p_ABLIM1 O14639_S458s _1_1_458_458 O14639 O14639|O14639-6|A0A0A0MRL6|O14639-2|F8W8M4|O14639-5|O14639-3|O14639-4|J3QSX6 Actin-binding LIM protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7920.7920.2 16.46 13.7 2.021 7 1 1 0 896.4282 1711.8812 S458s TMT10 450 (R) STSQGSINsPVYSR (H) S(0.0)T(0.0)S(0.0)QGS(0.0)INS(0.99)PVY(0.0)S(0.0)R s:Phosphorylated S ABLIM1 89568.8 2 6 435.1 313.2 HUMAN 1 30.7191 -0.6148 TSQLPLESDAVECLN-p P61978-2;S127-p TSQLPLESDAVECLN 0.235481836186952 0.565199062302111 -0.185666666666667 -0.0583333333333333 12.0333164356915 3.34112131645218 -0.185666666666667 -0.0583333333333333 0.0626135541459148 0.463327276591909 -2.33824537127521 -0.788767569976873 P61978 HNRNPK P61978.2.S127.p_HNRNPK P61978-2_S127s_1_1_127_127 P61978-2 P61978-2 Isoform 2 of Heterogeneous nuclear ribonucleoprotein K HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.36424.36424.5 11.97 11.97 1.161 8 1 1 0 919.6705 4513.3577 S127s N134n TMT10 104 (K) IIPTLEEGLQLPSPTATSQLPLEsDAVECLnYQHYK (G) IIPT(0.0)LEEGLQLPS(0.0)PT(0.0)AT(0.0)S(0.0)QLPLES(0.99)DAVECLN(1.0)Y(0.0)QHY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,n:Deamidated HNRNPK 51312.6 3 5 595.1 264.01 HUMAN 1 -12.0333 -3.3411 TSQSVNGSPQAEQPS-p Q86WB0;S62-p TSQSVNGSPQAEQPS 0.497988140528651 0.0104377289471877 0.091 0.422333333333333 5.57927022705547 27.8084491879213 0.091 0.422333333333333 0.276740663147475 0.00165636132409766 1.20923324338148 5.78377871189132 Q86WB0 ZC3HC1 Q86WB0.S62.p_ZC3HC1 Q86WB0_S62s _1_1_62_62 Q86WB0 Q86WB0|C9J0I9|Q86WB0-3|F8WAU5 Nuclear-interacting partner of ALK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21091.21091.4 33.38 33.38 3.34 10 1 1 0 1257.1222 4945.5005 S62s TMT10 34 (R) QLIDEGIAPEEGGVDAKDTSATSQSVNGsPQAEQPSLESTSK (E) QLIDEGIAPEEGGVDAKDT(0.0)S(0.0)AT(0.0)S(0.0)QS(0.0)VNGS(0.99)PQAEQPS(0.0)LES(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ZC3HC1 56401.6 13 2 624.1 258.98 HUMAN 1 5.5793 27.8084 TSQVGAASAPAKESP-p E7ETY2;S375-p TSQVGAASAPAKESP 0.493296639932215 0.00410027641213345 -0.0946666666666667 -0.576666666666667 5.65092947876019 35.1498934231845 -0.0946666666666667 -0.575582280021177 0.272211865682375 0.000305499608256748 -1.22212039405022 -8.14955866188168 E7ETY2 TCOF1 E7ETY2.S375.p_TCOF1 E7ETY2_S375s _1_1_375_375 E7ETY2 Q13428-6|Q13428-8|Q13428-2|Q13428-5|Q13428-4|Q13428-3|E7ETY2|Q13428-7 Treacle protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6840.6840.4 16.3 16.3 1.105 4 1 1 0 613.8448 2372.3865 S375s TMT10 368 (K) TSQVGAAsAPAKESPRK (G) T(0.0)S(0.0)QVGAAS(0.99)APAKES(0.0)PRK K:TMT10,s:Phosphorylated S TCOF1 152529.5 10 10 19.1 1034.65 HUMAN 1 -5.6509 -35.1499 TSRASELSPGRSVTA-p Q8NFF5;S106-p TSRASELSPGRSVTA 0.987670264968862 0.0659517516526762 -0.00300000000000002 0.336333333333333 0.109168026452166 15.7099291866067 -0.00300000000000003 0.336333333333333 0.975176433388031 0.0268538823159426 -0.0325814024214322 3.01061003964676 Q8NFF5 FLAD1 Q8NFF5.S106.p_FLAD1 Q8NFF5_S106s _1_1_106_106 Q8NFF5 Q8NFF5|Q8NFF5-2|Q5T196|Q8NFF5-3 FAD synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.35446.35446.3 20.82 20.82 1.146 4 1 1 0 955.204 2783.6283 S106s TMT10 102 (R) ASELsPGRSVTAGIIIVGDEILK (G) AS(0.0)ELS(0.99)PGRS(0.0)VT(0.0)AGIIIVGDEILK K:TMT10,s:Phosphorylated S FLAD1 66006.1 5 1 2941.1 65.29 HUMAN 1 -0.1092 15.7099 TSRCLIKSPDRLADI-p P52948;S839-p TSRCLIKSPDRLADI 0.980699778242646 0.110539488170871 0.004 -0.183666666666667 0.168489220606748 12.628407104269 0.00399999999999999 -0.183666666666667 0.961946852455908 0.054595806967077 0.0499596208219588 -2.4430236561175 P52948 NUP98 P52948.S839.p_NUP98 P52948_S839s _1_1_839_839 P52948 P52948|P52948-5|P52948-2|P52948-6|P52948-3|P52948-4 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20351.20351.5 18.24 15.01 10.506 3 1 1 0 643.5444 3133.7192 S839s TMT10 835 (R) CLIKsPDRLADINYEGRLEAVSR (K) CLIKS(0.99)PDRLADINY(0.0)EGRLEAVS(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NUP98 198716.8 6 12 187.1 472.84 HUMAN 1 0.1685 -12.6284 TSRCLQLSPPSQSKL-p Q9HBH9;S437-p TSRCLQLSPPSQSKL 0.681659995508636 0.551069830566264 -0.0643333333333334 0.0623333333333334 3.1223370063442 3.48471167635942 -0.0643333333333333 0.0623333333333334 0.487266213992622 0.448258808450131 -0.745152652960126 0.817128842305631 Q9HBH9 MKNK2 Q9HBH9.S437.p_MKNK2 Q9HBH9_S437s _1_1_437_437 Q9HBH9 Q9HBH9 MAP kinase-interacting serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16562.16793.3 9.72 9.72 9.717 3 1 1 0 594.9797 1702.9562 S437s TMT10 433 (R) CLQLsPPSQSK (L) CLQLS(0.99)PPS(0.0)QS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MKNK2 52786.8 2 4 2773.1 71.17 HUMAN 1 -3.1223 3.4847 TSRDGSISPVSSECS-p H7BY22;S161-p TSRDGSISPVSSECS 0.204713889706557 0.061016884013347 0.198 0.254333333333333 13.3254149042276 16.1774496597926 0.198 0.254333333333333 0.0465005949594635 0.0241132103121538 2.56987364451749 3.10011632393066 H7BY22 ZBTB44 H7BY22.S161.p_ZBTB44 H7BY22_S161s _1_1_161_161 H7BY22 Q8NCP5|H7BY22|Q8NCP5-2|Q8NCP5-4|Q8NCP5-3 Zinc finger and BTB domain-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13772.13772.2 16.13 13.84 1.793 5 1 1 0 1008.9609 1936.9483 S161s TMT10 157 (R) DGSIsPVSSECSVVER (T) DGS(0.0)IS(0.99)PVS(0.0)S(0.0)ECS(0.0)VVER C:Carbamidomethylation,s:Phosphorylated S ZBTB44 64850.4 2 1 3799.1 42.87 HUMAN 1 13.3254 16.1774 TSRFGPGSPPVQAKQ-p Q969F2;S264-p TSRFGPGSPPVQAKQ 0.709048635395475 0.070330473070744 0.0586666666666667 -0.208333333333333 2.80702757374968 15.3311469738053 0.0586666666666667 -0.208333333333333 0.523958925232744 0.0293011929714602 0.680937274211469 -2.93882202828106 Q969F2 NKD2 Q969F2.S264.p_NKD2 Q969F2_S264s _1_1_264_264 Q969F2 Q969F2 Protein naked cuticle homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16619.16619.2 9.02 9.02 99 1 1 1 0 811.939 1542.9044 S264s TMT10 260 (R) FGPGsPPVQAK (Q) FGPGS(1.0)PPVQAK K:TMT10,s:Phosphorylated S NKD2 50396.7 1 3 4076.1 38.12 HUMAN 1 2.807 -15.3311 TSRGTSQTPNASSPG-p Q643R3;T499-p TSRGTSQTPNASSPG 0.321412916785627 0.265939925640849 0.173 -0.13 9.22389070535179 7.57377536281142 0.173 -0.13 0.119566888984001 0.174832619141391 1.84712656433651 -1.56065472553315 Q643R3 LPCAT4 Q643R3.T499.p_LPCAT4 Q643R3_T499t _1_1_499_499 Q643R3 Q643R3|A0A0C4DGT4 Lysophospholipid acyltransferase LPCAT4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.16108.16108.4 8.58 5.76 1.104 7 1 1 0 751.8832 2924.5478 T499t TMT10 495 (R) GTSQtPNASSPGNPTALANGTVQAPK (Q) GT(0.0)S(0.0)QT(0.99)PNAS(0.0)S(0.0)PGNPT(0.0)ALANGT(0.0)VQAPK K:TMT10,t:Phosphorylated T LPCAT4 57674.5 2 1 5649.1 17.48 HUMAN 1 9.2239 -7.5738 TSRLSTASCPTPKVQ-p Q9NQX3-2;S316-p TSRLSTASCPTPKVQ 0.278257140485788 0.0477102565539202 0.304333333333333 -0.343666666666667 10.5109233408364 17.6747174014101 0.304333333333333 -0.343666666666667 0.0889012087496003 0.0170815886758797 2.07063222866755 -3.39401545434936 Q9NQX3 GPHN Q9NQX3.2.S316.p_GPHN Q9NQX3-2_S316s _1_1_316_316 Q9NQX3-2 F5H039|Q9NQX3-2|G3V582 Isoform 2 of Gephyrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11854.11854.2 9.36 9.36 1.231 4 1 1 0 800.4146 1519.8554 S316s TMT10 312 (R) LSTAsCPTPK (V) LS(0.0)T(0.0)AS(0.99)CPT(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GPHN 84130.7 2 2 1469.1 139.8 HUMAN 1 10.5109 -17.6747 TSRNQLVTPEPTSRA-p Q14676;T1589-p TSRNQLVTPEPTSRA 0.134738301810513 0.0369221560367934 0.264333333333333 0.272 17.8664374076327 19.261381466156 0.264333333333333 0.272 0.0163439211811551 0.0118539162182657 3.43528510236516 3.71888022588427 Q14676 MDC1 Q14676.T1589.p_MDC1 Q14676_T1589t _1_1_1589_1589 Q14676 Q14676|Q14676-2 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9417.9417.3 15.46 15.46 7.71 3 1 1 0 517.5972 1470.8114 T1589t TMT10 1585 (R) NQLVtPEPTSR (A) NQLVT(0.99)PEPT(0.0)S(0.0)R t:Phosphorylated T MDC1 227803.2 3 48 6.1 1662.62 HUMAN 1 17.8664 19.2614 TSRQSPASPPPLGGG-p A0A0G2JPP5;S1448-p TSRQSPASPPPLGGG 0.390280290576841 0.0448815013405023 0.212333333333333 0.255333333333333 7.55386771884039 18.0402727383175 0.212333333333333 0.255333333333333 0.175635874774822 0.01570264188146 1.55765808851599 3.46757347276707 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1448.p_SCRIB A0A0G2JPP5_S1448s _1_1_1448_1448 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13178.13382.3 15.47 13 1.251 2 1 1 0 599.6474 1716.9594 S1448s TMT10 1444 (R) QSPAsPPPLGGGAPVR (T) QS(0.0)PAS(0.99)PPPLGGGAPVR s:Phosphorylated S SCRIB 178690.9 5 34 22.1 1004.81 HUMAN 1 7.5539 18.0403 TSRRNAETPEATTQQ-p Q8N163;T484-p TSRRNAETPEATTQQ 0.180112631184488 0.0174961773826595 0.253333333333333 0.340666666666667 14.6858508774374 24.2170567055231 0.253333333333333 0.340666666666667 0.0339949895693712 0.00378699149224738 2.81973726751989 4.84237683492784 Q8N163 CCAR2 Q8N163.T484.p_CCAR2 Q8N163_T484t _1_1_484_484 Q8N163 Q8N163|Q8N163-2|G3V119 Cell cycle and apoptosis regulator protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27360.27360.5 24.15 16.25 1.559 6 1 1 0 1071.7202 5274.6426 T484t TMT10 481 (R) NAEtPEATTQQETDTDLPEAPPPPLEPAVIARPGCVNLSLHGIVEDR (R) NAET(0.99)PEAT(0.0)T(0.0)QQET(0.0)DT(0.0)DLPEAPPPPLEPAVIARPGCVNLS(0.0)LHGIVEDR C:Carbamidomethylation,t:Phosphorylated T CCAR2 103527.3 4 4 891.1 204.52 HUMAN 1 14.6859 24.2171 TSRRQSVSPPYKEPS-p Q9NYV4-2;S276-p TSRRQSVSPPYKEPS 0.390604115896895 0.670399391790397 0.129666666666667 0.0426666666666667 7.54384544240272 2.37321199727131 0.129666666666667 0.0426666666666667 0.176041660256295 0.579000315361693 1.55591404254572 0.58987982049356 Q9NYV4 CDK12 Q9NYV4.2.S276.p_CDK12 Q9NYV4-2_S276s _1_1_276_276 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9337.9337.4 12 5.92 1.472 8 1 1 0 677.347 2626.3989 S276s TMT10 272 (R) RQSVsPPYKEPSAYQSSTR (S) RQS(0.0)VS(0.99)PPY(0.0)KEPS(0.0)AY(0.0)QS(0.0)S(0.0)T(0.0)R K:TMT10,s:Phosphorylated S CDK12 163853.1 2 10 59.1 708.76 HUMAN 1 7.5438 2.3732 TSRTPKDSPGIPPSA-p Q15418;S363-p TSRTPKDSPGIPPSA 0.037721822717877 0.00967265628027221 -0.556 -0.560333333333333 32.458443953203 28.385244080964 -0.556 -0.560333333333333 0.000567747989110174 0.00145035925933094 -7.21641286036223 -5.94671874974219 Q15418 RPS6KA1 Q15418.S363.p_RPS6KA1 Q15418_S363s _1_1_363_363 Q15418 Q15418-2|E9PGT3|Q15418-4|Q15418-3 Ribosomal protein S6 kinase alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14738.14738.4 17.65 17.65 2.669 3 1 1 0 629.3381 2434.3607 S363s TMT10 359 (R) TPKDsPGIPPSAGAHQLFR (G) T(0.0)PKDS(0.99)PGIPPS(0.0)AGAHQLFR K:TMT10,s:Phosphorylated S RPS6KA1 83120.8 3 3 1026.1 186.86 HUMAN 1 -32.4584 -28.3852 TSSASDFSDPVYKEI-p Q8IV48;S62-p TSSASDFSDPVYKEI 0.283283360364086 0.889815645687719 -0.234666666666667 0.0143333333333333 10.3493984497308 0.711263153656927 -0.234666666666667 0.0143333333333333 0.0922699223281696 0.848933525214988 -2.04248370346486 0.199777458180128 Q8IV48 ERI1 Q8IV48.S62.p_ERI1 Q8IV48_S62s _1_1_62_62 Q8IV48 Q8IV48 3'-5' exoribonuclease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25000.25000.3 11.9 11.9 2.387 6 1 1 0 734.697 2122.1109 S62s TMT10 53 (K) FITSSASDFsDPVYK (E) FIT(0.0)S(0.0)S(0.0)AS(0.0)DFS(0.99)DPVY(0.0)K K:TMT10,s:Phosphorylated S ERI1 40519.7 1 2 6390.1 11.9 HUMAN 1 -10.3494 0.7113 TSSAVWNSPPLQGAR-p Q9NQS7;S899-p TSSAVWNSPPLQGAR 0.129513919822637 0.248884544854775 0.336666666666667 -0.114666666666667 18.3888266532225 7.95696860727281 0.336666666666667 -0.114666666666667 0.0144916332557869 0.160067491622027 3.54138817028814 -1.62718207103813 Q9NQS7 INCENP Q9NQS7.S899.p_INCENP Q9NQS7_S899s _1_1_899_899 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12603.12853.3 22.34 22.34 12.285 4 1 1 0 679.3478 1956.0613 S899s TMT10 891 (K) RTSSAVWNsPPLQGAR (V) RT(0.0)S(0.0)S(0.0)AVWNS(0.99)PPLQGAR s:Phosphorylated S INCENP 105826.3 7 23 138.1 524.38 HUMAN 1 18.3888 -7.957 TSSDEVQSPVRVRMR-p Q00536-2;S169-p TSSDEVQSPVRVRMR 0.261394071408151 0.340486895156721 -0.184666666666667 0.176333333333333 11.0417571695919 6.19798808677564 -0.184666666666667 0.176333333333333 0.0786727412822552 0.239994446013957 -2.16342646341108 1.31943421620875 Q00536 CDK16 Q00536.2.S169.p_CDK16 Q00536-2_S169s _1_1_169_169 Q00536-2 Q00536-2|Q00536-3|A0A087WZU2 Isoform 2 of Cyclin-dependent kinase 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.10150.10150.3 15.68 15.68 1.162 7 1 1 0 968.7678 2824.3217 S169s TMT10 150 (K) MGSDGESDQASATSSDEVQsPVRVR (M) MGS(0.0)DGES(0.0)DQAS(0.0)AT(0.0)S(0.0)S(0.0)DEVQS(0.99)PVRVR s:Phosphorylated S CDK16 63855.9 2 3 672.1 248.68 HUMAN 1 -11.0418 6.198 TSSGDPPSPLVKQLS-p Q99618;S87-p TSSGDPPSPLVKQLS 0.200527626467784 0.00326950192050815 -0.21 -0.722333333333333 13.580429816146 37.2417559263408 -0.21 -0.722333333333333 0.0438487299054678 0.000188722815642889 -2.61620217052735 -8.95731799229764 Q99618 CDCA3 Q99618.S87.p_CDCA3 Q99618_S87s _1_1_87_87 Q99618 Q99618|F8WDL1|F5GX58 Cell division cycle-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13520.13520.2 14.43 11.2 5.563 4 1 1 0 861.9584 1642.9416 S87s TMT10 80 (K) TSSGDPPsPLVK (Q) T(0.0)S(0.0)S(0.0)GDPPS(0.99)PLVK K:TMT10,s:Phosphorylated S CDCA3 28997.8 6 6 831.1 215.73 HUMAN 1 -13.5804 -37.2418 TSSGLSNSFAGKSNH-p Q9P0U3;S132-p TSSGLSNSFAGKSNH 0.281543097513104 0.474638533295898 -0.275333333333333 -0.0693333333333333 10.4078438445083 4.3155677057607 -0.275333333333333 -0.0693333333333333 0.0910365132299146 0.37020580927345 -2.05266460895986 -0.976815004441451 Q9P0U3 SENP1 Q9P0U3.S132.p_SENP1 Q9P0U3_S132s _1_1_132_132 Q9P0U3 Q9P0U3|Q9P0U3-2 Sentrin-specific protease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13494.13494.2 15.74 15.74 2.175 5 1 1 0 847.4309 1613.8899 S132s TMT10 125 (K) TSSGLSNsFAGK (S) T(0.0)S(0.0)S(0.0)GLS(0.0)NS(0.99)FAGK K:TMT10,s:Phosphorylated S SENP1 74049.8 7 7 1420.1 144.33 HUMAN 1 -10.4078 -4.3156 TSSHFSASEESMDFL-p Q9ULU4-19;S489-p TSSHFSASEESMDFL 0.588965373424401 0.0247309816796438 0.0878333333333333 0.328833333333333 4.23320459679358 21.8663292611326 0.0878333333333333 0.328833333333333 0.377293688576425 0.00650679424508699 0.961452565186955 4.28693115909599 Q9ULU4 ZMYND8 Q9ULU4.19.S489.p_ZMYND8 Q9ULU4-19_S487sS489s_2_2_487_489 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24390.24390.3 12.09 12.09 1.251 6 2 2 0 869.7112 2447.1801 S487s S489s TMT10 481 (K) ATSSHFsAsEESMDFLDK (S) AT(0.0)S(0.0)S(0.0)HFS(0.99)AS(0.99)EES(0.0)MDFLDK K:TMT10,s:Phosphorylated S ZMYND8 139738.7 3 24 57.1 712.18 HUMAN 2 4.2332 21.8663 TSSKEDVTPPLSPDD-p Q9Y4B5;T1417-p TSSKEDVTPPLSPDD 0.0386603595331013 0.0320849526179946 -0.650666666666667 -0.291666666666667 32.1032525279805 20.1549440760278 -0.650666666666667 -0.291666666666667 0.000616133393025041 0.00964951737380614 -7.09845906518682 -3.90858856727142 Q9Y4B5 MTCL1 Q9Y4B5.T1417.p_MTCL1 Q9Y4B5_T1417tS1421s_2_2_1417_1421 Q9Y4B5 Q9Y4B5|Q9Y4B5-3|Q9Y4B5-2|Q9Y4B5-4 Microtubule cross-linking factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22627.22627.4 14.73 14.73 3.989 6 2 2 0 758.3929 2870.5966 T1417t S1421s TMT10 1406 (K) GLPSTSSKEDVtPPLsPDDLK (Y) GLPS(0.0)T(0.0)S(0.0)S(0.0)KEDVT(0.99)PPLS(0.99)PDDLK K:TMT10,t:Phosphorylated T,s:Phosphorylated S MTCL1 210777.5 2 9 1389.1 147.22 HUMAN 1 -32.1033 -20.1549 TSSKKVIYSQPSARS-p Q9Y624;Y280-p TSSKKVIYSQPSARS 0.498861879214242 0.0063025720553844 0.124333333333333 -0.499 5.56483336857077 31.6858935733807 0.124333333333333 -0.499 0.277662137831629 0.000678282547556039 1.20663391014117 -6.95007829940266 Q9Y624 F11R Q9Y624.Y280.p_F11R Q9Y624_Y280y _1_1_280_280 Q9Y624 Q9Y624|A0A087WY82|Q9Y624-2 Junctional adhesion molecule A GG20160819_MSz_CCLE_T4D7_pY_Injection_02.9800.9880.2 16.93 9.37 3.075 3 1 1 0 665.3411 1249.7102 Y280y TMT10 278 (K) VIySQPSAR (S) VIY(0.99)S(0.0)QPS(0.0)AR y:Phosphorylated Y F11R 32981.9 3 1 98.1 29.1 HUMAN 1 5.5648 -31.6859 TSSKTGQSVDELFQK-p Q969Q5;S160-p TSSKTGQSVDELFQK 0.134638029138876 0.561509274896409 -0.462 0.0633333333333333 17.8743079896706 3.37751071404709 -0.462 0.0633333333333334 0.0163143284309424 0.459461291065512 -3.43687221474951 0.795979177451076 Q969Q5 RAB24 Q969Q5.S160.p_RAB24 Q969Q5_S160s _1_1_160_160 Q969Q5 Q969Q5|F8W8H5 Ras-related protein Rab-24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22017.22017.3 9.98 9.98 2.285 2 1 1 0 597.3096 1709.9474 S160s TMT10 157 (K) TGQsVDELFQK (V) T(0.0)GQS(0.99)VDELFQK K:TMT10,s:Phosphorylated S RAB24 23409 1 1 6717.1 9.98 HUMAN 1 -17.8743 3.3775 TSSLESASNIELQTT-p P50851;S1005-p TSSLESASNIELQTT 0.908771749351651 0.935144290705434 0.019 0.01 0.81613440184824 0.410868721001158 0.019 0.01 0.828679432227533 0.909731280516468 0.227099718607574 0.118773456119483 P50851 LRBA P50851.S1005.p_LRBA P50851_S1005s_1_1_1005_1005 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28049.28049.4 21.27 21.27 0.761 14 1 1 0 1433.1676 5648.6809 S1005s N1025n TMT10 998 (K) TSSLESAsNIELQTTNTSYEEMKAEQEnQELPDEGTLEETLTNETR (N) T(0.0)S(0.0)S(0.0)LES(0.0)AS(0.99)N(0.0)IELQT(0.0)T(0.0)N(0.50)T(0.0)S(0.0)Y(0.0)EEMKAEQEN(0.50)QELPDEGT(0.0)LEET(0.0)LT(0.0)N(0.0)ET(0.0)R K:TMT10,s:Phosphorylated S,n:Deamidated LRBA 321783.7 3 4 74.1 649.16 HUMAN 1 0.8161 0.4109 TSSPCPDSPLPPLST-p Q5THJ4;S1573-p TSSPCPDSPLPPLST 0.696252560430266 0.899017687828194 -0.0863333333333333 0.0153333333333333 2.95456837235613 0.647678221521593 -0.0863333333333333 0.0153333333333334 0.506457681794336 0.861454170470855 -0.711169420866827 0.182989567122954 Q5THJ4 VPS13D Q5THJ4.S1573.p_VPS13D Q5THJ4_S1573s _1_1_1573_1573 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18115.18115.4 16.49 12 2.807 10 1 1 0 904.6818 3535.7449 S1573s TMT10 1561 (K) YPASATSSPCPDsPLPPLSTCGESSVERK (E) Y(0.0)PAS(0.0)AT(0.0)S(0.0)S(0.0)PCPDS(0.99)PLPPLS(0.0)T(0.0)CGES(0.0)S(0.0)VERK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VPS13D 495672.3 2 10 124.1 545.31 HUMAN 1 -2.9546 0.6477 TSSSKRQSQQLEALQ-p Q9P0K7;S915-p TSSSKRQSQQLEALQ 0.0241132206334896 0.0015175837239283 -0.794333333333333 -0.941666666666667 37.5087212604155 45.4837653896083 -0.794333333333334 -0.941666666666667 0.000177471195134504 2.8289382060237e-05 -9.08463409134543 -12.8959549022044 Q9P0K7 RAI14 Q9P0K7.S915.p_RAI14 Q9P0K7_S915s _1_1_915_915 Q9P0K7 Q9P0K7-2|Q9P0K7-3|Q9P0K7-4 Ankycorbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14050.14050.3 11.64 11.64 99 1 1 1 0 741.4069 2142.2395 S915s TMT10 913 (K) RQsQQLEALQQQVK (Q) RQS(1.0)QQLEALQQQVK K:TMT10,s:Phosphorylated S RAI14 110666.9 2 21 498.1 292.24 HUMAN 1 -37.5087 -45.4838 TSSSNPSSPAPDWYK-p P46100;S1996-p TSSSNPSSPAPDWYK 0.916963697628859 0.0265968002706058 -0.0166666666666667 0.335 0.734303839195895 21.3814267318116 -0.0166666666666667 0.335 0.844441592471451 0.00727540755664787 -0.205835821643937 4.17763415641905 P46100 ATRX P46100.S1996.p_ATRX P46100_S1995sS1996s_2_2_1995_1996 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19365.19365.2 11.05 11.05 1.133 7 2 2 0 1157.0175 2153.0915 S1995s S1996s TMT10 1988 (K) ATSSSNPssPAPDWYK (D) AT(0.0)S(0.0)S(0.0)S(0.0)NPS(0.99)S(0.99)PAPDWY(0.0)K K:TMT10,s:Phosphorylated S ATRX 285034.2 8 59 18.1 1035.36 HUMAN 1 -0.7343 21.3814 TSSTCQDSPEKTTLA-p Q9BX63;S128-p TSSTCQDSPEKTTLA 0.137509639679468 0.00639800023666993 0.893 -1.08366666666667 17.6403458350602 31.5603362562156 0.893 -1.08366666666667 0.017217314655273 0.000698178344929145 3.38984049289677 -6.90956068438186 Q9BX63 BRIP1 Q9BX63.S128.p_BRIP1 Q9BX63_S128s _1_1_128_128 Q9BX63 Q9BX63|Q9BX63-2|J3QSE8 Fanconi anemia group J protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10873.10890.4 19.02 19.02 3.092 7 1 1 0 691.6003 2683.4176 S128s TMT10 119 (R) NGTSSTCQDsPEKTTLAAK (L) NGT(0.0)S(0.0)S(0.0)T(0.0)CQDS(0.99)PEKT(0.0)T(0.0)LAAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRIP1 142871.9 3 3 837.1 214.97 HUMAN 1 17.6403 -31.5603 TSSVLGMSVESAPAV-p Q12888-2;S129-p TSSVLGMSVESAPAV 0.585434871518719 0.0296043234336088 0.145 0.597 4.27676095574444 20.6914896213356 0.145 0.597 0.373528638130815 0.00852807552571644 0.969676659471684 4.02501451362643 Q12888 TP53BP1 Q12888.2.S129.p_TP53BP1 Q12888-2_S129s _1_1_129_129 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23524.23524.4 18.89 16.11 2.05 5 1 1 0 883.452 3450.8129 S129s TMT10 122 (R) TSSVLGMsVESAPAVEEEKGEELEQK (E) T(0.0)S(0.0)S(0.0)VLGMS(0.99)VES(0.0)APAVEEEKGEELEQK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 1 6 3.1 2297.07 HUMAN 1 4.2768 20.6915 TSSVPVVSPNTDEFL-p P81274;S541-p TSSVPVVSPNTDEFL 0.852603464847021 0.440680627800933 0.0286666666666667 -0.08 1.34261341395978 4.73994556413434 0.0286666666666667 -0.08 0.734071999465284 0.335741822512451 0.35774098721844 -1.05597473221886 P81274 GPSM2 P81274.S541.p_GPSM2 P81274_S541s _1_1_541_541 P81274 P81274 G-protein-signaling modulator 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.35772.35772.2 14.39 14.39 1.906 8 1 1 0 1429.6982 2778.4359 S541s TMT10 534 (K) TSSVPVVsPNTDEFLDLLASSQSR (R) T(0.0)S(0.0)S(0.0)VPVVS(0.99)PNT(0.0)DEFLDLLAS(0.0)S(0.0)QS(0.0)R s:Phosphorylated S GPSM2 77402.4 3 4 3014.1 63.23 HUMAN 1 1.3426 -4.7399 TSSVSPGSPPSSPRS-p A0A0A0MRX4;S555-p TSSVSPGSPPSSPRS 0.677586717703107 0.0133262814067011 0.0636666666666667 0.371333333333333 3.16372009072842 26.0828731984368 0.0636666666666667 0.371333333333333 0.482645199469116 0.00246440839845885 0.753473971449072 5.31635461857934 A0A0A0MRX4 RGL3 A0A0A0MRX4.S555.p_RGL3 A0A0A0MRX4_S555s _1_1_555_555 A0A0A0MRX4 Q3MIN7|A0A0A0MRX4 Ral guanine nucleotide dissociation stimulator-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9566.9787.3 20.72 20.72 1.115 14 1 1 0 960.1034 2798.3278 S555s TMT10 534 (K) SSSPSGSPGDPSSPTSSVSPGsPPSSPR (S) S(0.0)S(0.0)S(0.0)PS(0.0)GS(0.0)PGDPS(0.0)S(0.0)PT(0.0)S(0.0)S(0.0)VS(0.0)PGS(0.99)PPS(0.0)S(0.0)PR s:Phosphorylated S RGL3 78574.5 1 4 1395.1 146.85 HUMAN 1 3.1637 26.0829 TSSYNCPSPYADGRL-p Q9HCU4;S2648-p TSSYNCPSPYADGRL 0.603282849048132 0.0198070948003416 0.0813333333333333 -0.433 4.0528309312519 23.3655869998616 0.0813333333333333 -0.433 0.393293625001543 0.00460724492170044 0.927214899015711 -4.63608815458881 Q9HCU4 CELSR2 Q9HCU4.S2648.p_CELSR2 Q9HCU4_S2648s _1_1_2648_2648 Q9HCU4 Q9HCU4 Cadherin EGF LAG seven-pass G-type receptor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.12136.12136.2 19.05 16.38 3.833 8 1 1 0 1092.9747 2104.9807 S2648s TMT10 2638 (K) STLTSSYNCPsPYADGR (L) S(0.0)T(0.0)LT(0.0)S(0.0)S(0.0)Y(0.0)NCPS(0.99)PY(0.0)ADGR C:Carbamidomethylation,s:Phosphorylated S CELSR2 322410.4 1 1 4929.1 24.97 HUMAN 1 4.0528 -23.3656 TSTDQPVTPEPTSQA-p Q14676;T1425-p TSTDQPVTPEPTSQA 0.323008479355709 0.0710033170451477 0.136 0.234 9.18831968083154 15.2732670986071 0.136 0.234 0.120550226836774 0.0296943135562628 1.84096692801418 2.92790807901645 Q14676 MDC1 Q14676.T1425.p_MDC1 Q14676_T1425t _1_1_1425_1425 Q14676 Q14676|Q14676-2 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18527.18527.4 22.12 17.34 2.676 13 1 1 0 1126.5944 4423.3811 T1425t TMT10 1399 (R) SSGKTPETLVPTAPKLEPSTSTDQPVtPEPTSQATR (G) S(0.0)S(0.0)GKT(0.0)PET(0.0)LVPT(0.0)APKLEPS(0.0)T(0.0)S(0.0)T(0.0)DQPVT(0.99)PEPT(0.0)S(0.0)QAT(0.0)R K:TMT10,t:Phosphorylated T MDC1 227803.2 7 41 6.1 1662.62 HUMAN 1 9.1883 15.2733 TSTDQPVTPEPTSRA-p Q14676;T1548-p TSTDQPVTPEPTSRA 0.225645828512172 0.559030464172909 0.346333333333333 -0.063 12.4103456142109 3.40471181896292 0.346333333333333 -0.063 0.0574070775485248 0.456592546914181 2.40533716146185 -0.80135903297507 Q14676 MDC1 Q14676.T1548.p_MDC1 Q14676_T1548t _1_1_1548_1548 Q14676 Q14676|Q14676-2|Q14676-3 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20560.20560.3 24.02 24.02 1.979 9 1 1 0 1114.5413 3261.6688 T1548t TMT10 1526 (K) TPETVVPAAPELQPSTSTDQPVtPEPTSR (A) T(0.0)PET(0.0)VVPAAPELQPS(0.0)T(0.0)S(0.0)T(0.0)DQPVT(0.99)PEPT(0.0)S(0.0)R t:Phosphorylated T MDC1 227803.2 4 46 6.1 1662.62 HUMAN 1 12.4103 -3.4047 TSTDQPVTPKPTSRT-p Q14676;T1343-p TSTDQPVTPKPTSRT 0.62773843923883 0.0192839192808007 0.071 -0.346666666666667 3.75803873355649 23.5631015424489 0.071 -0.346666666666667 0.420916670717546 0.00440240350688256 0.870586402440256 -4.68340777703438 Q14676 MDC1 Q14676.T1343.p_MDC1 Q14676_T1343t _1_1_1343_1343 Q14676 Q14676|Q14676-2 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.21742.21742.5 21.28 21.28 1.58 10 1 1 0 723.9839 3535.926 T1343t TMT10 1321 (K) TPETVVPTAPELQISTSTDQPVtPKPTSR (T) T(0.0)PET(0.0)VVPT(0.0)APELQIS(0.0)T(0.0)S(0.0)T(0.0)DQPVT(0.99)PKPT(0.0)S(0.0)R K:TMT10,t:Phosphorylated T MDC1 227803.2 2 37 6.1 1662.62 HUMAN 1 3.758 -23.5631 TSTEQPVTPEPTSRA-p Q14676;T1384-p TSTEQPVTPEPTSRA 0.236551014520431 0.320681171711089 0.175 0.0953333333333333 11.9964263031058 6.53039377905046 0.175 0.0953333333333334 0.0631476756625603 0.222310831011 2.33170072093191 1.37817836755899 Q14676 MDC1 Q14676.T1384.p_MDC1 Q14676_T1384t _1_1_1384_1384 Q14676 Q14676|Q14676-2 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21916.22335.3 19.58 16.85 1.829 9 1 1 0 1123.2233 3287.6844 T1384t TMT10 1362 (K) NPESTVPIAPELPPSTSTEQPVtPEPTSR (A) NPES(0.0)T(0.0)VPIAPELPPS(0.0)T(0.0)S(0.0)T(0.0)EQPVT(0.99)PEPT(0.0)S(0.0)R t:Phosphorylated T MDC1 227803.2 7 38 6.1 1662.62 HUMAN 1 11.9964 6.5304 TSTKIDISNVKIPKH-p Q02878;S204-p TSTKIDISNVKIPKH 0.244699674666454 0.0286107106633554 0.191333333333333 -0.502333333333333 11.6926957554172 20.9017424279722 0.191333333333333 -0.502333333333333 0.0677221012069984 0.00812504466764616 2.27794300276057 -4.07117168805163 Q02878 RPL6 Q02878.S204.p_RPL6 Q02878_S204s _1_1_204_204 Q02878 Q02878 60S ribosomal protein L6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23714.23714.3 11.62 11.62 99 1 1 1 0 632.0524 1814.1718 S204s TMT10 201 (K) IDIsNVKIPK (H) IDIS(1.0)NVKIPK K:TMT10,s:Phosphorylated S RPL6 32784.4 1 1 6445.1 11.62 HUMAN 1 11.6927 -20.9017 TSTPAALSPSVLTTP-p P54198;S549-p TSTPAALSPSVLTTP 0.642910629713767 0.0169048692505771 -0.0783333333333333 0.414 3.58705437096281 24.4488994138881 -0.0783333333333333 0.414 0.437818957877008 0.00359012903922914 -0.837323043276633 4.89960013434608 P54198 HIRA P54198.S549.p_HIRA P54198_S549s _1_1_549_549 P54198 P54198|P54198-2 Protein HIRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.26615.26615.4 22.96 22.96 1.938 9 1 1 0 886.2194 3461.8839 S549s TMT10 537 (K) DSMNATSTPAALsPSVLTTPSKIEPMK (A) DS(0.0)MNAT(0.0)S(0.0)T(0.0)PAALS(0.99)PS(0.0)VLT(0.0)T(0.0)PS(0.0)KIEPMK K:TMT10,s:Phosphorylated S HIRA 113316.6 9 2 1371.1 149.22 HUMAN 1 -3.5871 24.4489 TSTPNRNSSKRRSSL-p Q9ULR3;S118-p TSTPNRNSSKRRSSL 0.175973502111451 0.0209571195470645 -0.481666666666667 -0.754 15.0000622422991 22.9590124117366 -0.481666666666667 -0.754 0.0316223233930208 0.00505939699914775 -2.87846284567163 -4.53967198959902 Q9ULR3 PPM1H Q9ULR3.S118.p_PPM1H Q9ULR3_S118s _1_1_118_118 Q9ULR3 Q9ULR3 Protein phosphatase 1H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4777.4777.4 9.43 9.43 9.429 5 1 1 0 572.0706 2205.2918 S118s TMT10 106 (K) KAGAVTSTPNRNsSK (R) KAGAVT(0.0)S(0.0)T(0.0)PNRNS(0.99)S(0.0)K K:TMT10,s:Phosphorylated S PPM1H 56960.5 1 2 820.1 218.82 HUMAN 1 -15.0001 -22.959 TSTQRPSSPETATKQ-p Q9UQ35;S323-p TSTQRPSSPETATKQ 0.202846697385928 0.0124943875935368 -0.338 0.400333333333333 13.4328891166944 26.5552327862987 -0.338 0.400333333333333 0.0453639735271566 0.00221042977182004 -2.58937168226817 5.44141482966264 Q9UQ35 SRRM2 Q9UQ35.S323.p_SRRM2 Q9UQ35_S322sS323s_2_2_322_323 Q9UQ35 Q9UQ35|Q9UQ35-2|Q9UQ35-3|A0A087X1W1 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13059.13059.5 20.02 12.73 1.105 12 2 2 0 934.8403 4510.2577 S322s S323s TMT10 303 (R) RGEGDAPFSEPGTTSTQRPssPETATKQPSSPYEDK (D) RGEGDAPFS(0.0)EPGT(0.0)T(0.0)S(0.0)T(0.0)QRPS(0.99)S(0.99)PET(0.0)AT(0.0)KQPS(0.0)S(0.0)PY(0.0)EDK K:TMT10,s:Phosphorylated S SRRM2 300351.7 23 172 2.1 3310.34 HUMAN 1 -13.4329 26.5552 TSTSKPNSPRVSQAR-p Q70CQ4;S1178-p TSTSKPNSPRVSQAR 0.877965189707424 0.0699610824721726 -0.0543333333333333 -0.358666666666667 1.11207935880997 15.3613983183332 -0.0543333333333333 -0.358666666666667 0.774091081946587 0.0290978009166796 -0.301760793811105 -2.94453207554688 Q70CQ4 USP31 Q70CQ4.S1178.p_USP31 Q70CQ4_S1178s _1_1_1178_1178 Q70CQ4 Q70CQ4|I3L4X5 Ubiquitin carboxyl-terminal hydrolase 31 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.4123.4123.3 12.01 6.46 3.208 6 1 1 0 614.6558 1761.9859 S1178s TMT10 1168 (R) ASATSTSKPNsPR (V) AS(0.0)AT(0.0)S(0.0)T(0.0)S(0.0)KPNS(0.99)PR K:TMT10,s:Phosphorylated S USP31 148417.6 1 7 1855.1 110.95 HUMAN 1 -1.1121 -15.3614 TSTSKSESNEDLFGL-p Q9NSY1;S949-p TSTSKSESNEDLFGL 0.897251682950453 0.0412318756395414 -0.024 0.339333333333333 0.923174456578846 18.5632113011514 -0.024 0.339333333333333 0.808504710148638 0.0139212704258854 -0.254494952946188 3.57411674074335 Q9NSY1 BMP2K Q9NSY1.S949.p_BMP2K Q9NSY1_S949s _1_1_949_949 Q9NSY1 Q9NSY1 BMP-2-inducible protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.34866.34866.3 20.45 20.45 1.197 4 1 1 0 1036.1718 3026.5359 S949s TMT10 947 (K) SEsNEDLFGLVPFDEITGSQQQK (V) S(0.0)ES(0.99)NEDLFGLVPFDEIT(0.0)GS(0.0)QQQK K:TMT10,s:Phosphorylated S BMP2K 130025 9 6 804.1 222.57 HUMAN 1 -0.9232 18.5632 TSTYREATPENDPNY-p Q9H074;T390-p TSTYREATPENDPNY 0.844833428174442 0.0593286763052064 -0.0426666666666667 0.238 1.4143953082422 16.3443559792034 -0.0426666666666667 0.238 0.722038689300718 0.0232040825634163 -0.374821475898198 3.13232003841541 Q9H074 PAIP1 Q9H074.T390.p_PAIP1 Q9H074_T390t_1_1_390_390 Q9H074 Q9H074|Q9H074-2|Q9H074-3 Polyadenylate-binding protein-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31359.31359.4 12.31 12.31 1.87 8 1 1 0 1135.7559 4459.0277 T390t N400n TMT10 388 (R) EAtPENDPNYFMnEPTFYTSDGVPFTAADPDYQEK (Y) EAT(0.99)PEN(0.0)DPN(0.0)Y(0.0)FMN(0.99)EPT(0.0)FY(0.0)T(0.0)S(0.0)DGVPFT(0.0)AADPDY(0.0)QEK K:TMT10,t:Phosphorylated T,n:Deamidated PAIP1 53980.1 3 3 3391.1 52.2 HUMAN 1 -1.4144 16.3444 TSVASFPSADETDGN-p Q13464;S1108-p TSVASFPSADETDGN 0.552918441896641 0.350470585251074 0.082 0.0936666666666667 4.74907813083981 6.03774283284925 0.082 0.0936666666666667 0.335036549221825 0.249015119313812 1.05786807707595 1.29097546117311 Q13464 ROCK1 Q13464.S1108.p_ROCK1 Q13464_S1105sS1108s_2_2_1105_1108 Q13464 Q13464 Rho-associated protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30536.30746.3 21.25 21.25 3.511 8 2 2 0 1071.4807 3052.4796 S1105s S1108s TMT10 1094 (K) LLDLSDSTSVAsFPsADETDGNLPESR (I) LLDLS(0.0)DS(0.0)T(0.0)S(0.0)VAS(0.99)FPS(0.99)ADET(0.0)DGNLPES(0.0)R s:Phosphorylated S ROCK1 159198.9 1 9 2757.1 71.63 HUMAN 1 4.7491 6.0377 TSVFTMPSPAPEVPL-p P52948;S1099-p TSVFTMPSPAPEVPL 0.608647611078849 0.110371279092991 0.0703333333333333 0.169 3.9930891247153 12.6379493276781 0.0703333333333333 0.169 0.398741177963773 0.0544759819402754 0.915808363836958 2.44473049033606 P52948 NUP98 P52948.S1099.p_NUP98 P52948_S1099s _1_1_1099_1099 P52948 P52948|P52948-5|P52948-2 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37548.37548.3 24.92 22.65 3.9 10 1 1 0 1392.3867 4095.1951 S1099s TMT10 1073 (R) AASLMNIPSTSSWSVPPPLTSVFTMPsPAPEVPLK (T) AAS(0.0)LMNIPS(0.0)T(0.0)S(0.0)S(0.0)WS(0.0)VPPPLT(0.0)S(0.0)VFT(0.0)MPS(0.99)PAPEVPLK K:TMT10,s:Phosphorylated S NUP98 198716.8 17 23 187.1 472.84 HUMAN 1 3.9931 12.6379 TSVISIDSPQKLAIL-p Q12888-2;S732-p TSVISIDSPQKLAIL 0.265747257066887 0.221679664574281 0.165666666666667 0.120666666666667 10.9090099766827 8.61648724882114 0.165666666666667 0.120666666666667 0.0811145946658272 0.137515380587799 2.14017614473107 1.74137763466163 Q12888 TP53BP1 Q12888.2.S732.p_TP53BP1 Q12888-2_S729sS732s_2_2_729_732 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20787.20787.5 15.11 15.11 1.229 5 2 2 0 786.5911 3768.988 S729s S732s TMT10 711 (K) EMPKKECSEAMEVETSVIsIDsPQK (L) EMPKKECS(0.0)EAMEVET(0.0)S(0.0)VIS(0.99)IDS(0.99)PQK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TP53BP1 216167.2 6 94 3.1 2297.07 HUMAN 1 10.909 8.6165 TSVKRVQSSPNLLAA-p O94875-12;S13-p TSVKRVQSSPNLLAA 0.66387929536223 0.62217190871681 0.067 0.0483333333333333 3.32926442817226 2.80121554321192 0.067 0.0483333333333333 0.46459395761493 0.524660592880632 0.786531694386234 0.67964757982968 O94875 SORBS2 O94875.12.S13.p_SORBS2 O94875-12_S13s _1_1_13_13 O94875-12 O94875-11|O94875-12|O94875-9 Isoform 12 of Sorbin and SH3 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11508.11508.3 12.86 12.86 1.129 2 1 1 0 559.9716 1597.9336 S13s TMT10 10 (K) RVQsSPNLLAAGR (D) RVQS(0.99)S(0.0)PNLLAAGR s:Phosphorylated S SORBS2 81021.6 6 1 962.1 194.05 HUMAN 1 3.3293 2.8012 TSVPGKASDPGAAST-p E7ERS3;S934-p TSVPGKASDPGAAST 0.654676990459408 0.0224755319034756 0.0736666666666667 0.328333333333333 3.4478558127761 22.514395826409 0.0736666666666667 0.328333333333333 0.452079088576643 0.00560480383791824 0.809997146994321 4.43572755805659 E7ERS3 ZC3H18 E7ERS3.S934.p_ZC3H18 E7ERS3_S934s _1_1_934_934 E7ERS3 E7ERS3|Q86VM9 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12063.12063.3 13.57 10.79 1.694 5 1 1 0 780.7623 2260.3116 S934s TMT10 926 (K) VTSVPGKAsDPGAASTK (S) VT(0.0)S(0.0)VPGKAS(0.99)DPGAAS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S ZC3H18 109165.8 1 21 157.1 499.97 HUMAN 1 3.4479 22.5144 TSVQQDKSDESDSSL-p Q7Z4S6;S1304-p TSVQQDKSDESDSSL 0.893317056675265 0.0497121111153576 0.0203333333333333 -0.309333333333333 0.957610528013505 17.4317036095422 0.0203333333333333 -0.309333333333333 0.802119265020587 0.0180646536376613 0.263211412685387 -3.34552161717792 Q7Z4S6 KIF21A Q7Z4S6.S1304.p_KIF21A Q7Z4S6_S1304sS1307s_2_2_1304_1307 Q7Z4S6 Q7Z4S6|Q7Z4S6-2 Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13432.13432.4 12.11 12.11 1.182 9 2 2 0 888.664 3391.6978 S1304s S1307s TMT10 1290 (R) LTVSQGNTSVQQDKsDEsDSSLSEVHR (S) LT(0.0)VS(0.0)QGNT(0.0)S(0.0)VQQDKS(0.99)DES(0.99)DS(0.0)S(0.0)LS(0.0)EVHR K:TMT10,s:Phosphorylated S KIF21A 188488.1 2 3 390.2 332.37 HUMAN 1 0.9576 -17.4317 TSVRRKVSLVLEKMQ-p Q9P2M7;S332-p TSVRRKVSLVLEKMQ 0.950466896477293 0.00317377556940554 -0.0103333333333333 0.968666666666667 0.434872657802628 37.5076021592457 -0.0103333333333333 0.968666666666667 0.904716965120369 0.000177516932260229 -0.12542276344325 9.06488594727116 Q9P2M7 CGN Q9P2M7.S332.p_CGN Q9P2M7_S332s _1_1_332_332 Q9P2M7 Q9P2M7|Q9P2M7-2 Cingulin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.19276.19276.2 11.6 11.6 99 1 1 1 0 842.0251 1603.0761 S332s TMT10 330 (R) KVsLVLEK (M) KVS(1.0)LVLEK K:TMT10,s:Phosphorylated S CGN 136611.7 8 13 239.1 416.31 HUMAN 1 -0.4349 37.5076 TSVRRRTSFYLPKDA-p Q9NS23-5;S207-p TSVRRRTSFYLPKDA 0.169763000955003 0.00307533718004014 -0.271666666666667 -0.677 15.3645025807863 37.7457823254715 -0.271666666666667 -0.677 0.0290770097392332 0.000168043518972604 -2.94709761538396 -9.16223804727107 Q9NS23 RASSF1 Q9NS23.5.S207.p_RASSF1 Q9NS23-5_S207s _1_1_207_207 Q9NS23-5 Q9NS23|Q9NS23-5|Q9NS23-2|Q9NS23-4|Q9NS23-3 Isoform E of Ras association domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.22398.22398.2 10.93 5.86 1.488 3 1 1 0 697.3785 1313.7869 S207s TMT10 206 (R) TsFYLPK (D) T(0.0)S(0.99)FY(0.0)LPK K:TMT10,s:Phosphorylated S RASSF1 39949.1 5 1 5562.1 18.19 HUMAN 1 -15.3645 -37.7458 TSVSKEDTDHEEKAS-p O75475;T122-p TSVSKEDTDHEEKAS 0.248491641321601 0.00445808574784288 -1.06 0.760666666666667 11.5504709006025 34.5260516300611 -1.06 0.760666666666667 0.0699766117038751 0.000352691373201103 -2.25284486871659 7.92135656830281 O75475 PSIP1 O75475.T122.p_PSIP1 O75475_T122t _1_1_122_122 O75475 O75475|O75475-2|O75475-3 PC4 and SFRS1-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7915.7915.5 18.39 14.46 1.658 6 1 1 0 695.752 3394.7632 T122t TMT10 114 (K) ETSVSKEDtDHEEKASNEDVTK (A) ET(0.0)S(0.0)VS(0.0)KEDT(0.99)DHEEKAS(0.0)NEDVT(0.0)K K:TMT10,t:Phosphorylated T PSIP1 60216.3 3 4 382.1 334.17 HUMAN 1 -11.5505 34.5261 TSVTLTPTPVKSTAD-p O60281;T1872-p TSVTLTPTPVKSTAD 0.493482517035959 0.0110382865087685 -0.0926666666666667 -0.740666666666667 5.64778151149994 27.4134690129523 -0.0926666666666667 -0.740666666666667 0.27240924895968 0.00181406606280439 -1.22155478284849 -5.67417992144926 O60281 ZNF292 O60281.T1872.p_ZNF292 O60281_T1872t_1_1_1872_1872 O60281 O60281 Zinc finger protein 292 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.28926.28926.4 17.53 17.53 2.442 8 1 1 0 977.7932 3827.1807 N1864n T1872t TMT10 1847 (K) LKLENDLSTPASQCVLInTSVTLTPtPVK (S) LKLEN(0.0)DLS(0.0)T(0.0)PAS(0.0)QCVLIN(0.99)T(0.0)S(0.0)VT(0.0)LT(0.0)PT(0.99)PVK K:TMT10,C:Carbamidomethylation,n:Deamidated,t:Phosphorylated T ZNF292 309716.9 1 4 1936.1 106.19 HUMAN 1 -5.6478 -27.4135 TSYMHQRSPGGPTKL-p Q8IWI9-4;S1328-p TSYMHQRSPGGPTKL 0.355970344233042 0.155558711850649 -0.204 -0.234333333333333 8.33872526503098 10.6265142624002 -0.204 -0.234333333333333 0.146597806960487 0.086566243865054 -1.69387535258361 -2.08989378502478 Q8IWI9 MGA Q8IWI9.4.S1328.p_MGA Q8IWI9-4_S1328s _1_1_1328_1328 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.4421.4421.2 7.45 2.29 6.391 2 1 1 0 476.7392 872.5039 S1328s Hydrogen 1328 (R) sPGGPTK (L) S(0.99)PGGPT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S MGA 338321.5 1 12 141.1 523.06 HUMAN 1 -8.3387 -10.6265 TTALAGRSPSPASGR-p Q9UQ35;S295-p TTALAGRSPSPASGR 0.631521203791749 0.377295041575787 0.114333333333333 0.159 3.71684483292325 5.6223428117195 0.114333333333333 0.159 0.424928163872715 0.274009562218114 0.862601890169498 1.2167097436673 Q9UQ35 SRRM2 Q9UQ35.S295.p_SRRM2 Q9UQ35_S295s _1_1_295_295 Q9UQ35 Q9UQ35|Q9UQ35-2|Q9UQ35-3|A0A087X1W1 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.3948.3948.3 15.52 8.95 1.848 6 1 1 0 659.3356 1896.0249 S295s TMT10 286 (K) THTTALAGRsPSPASGR (R) T(0.0)HT(0.0)T(0.0)ALAGRS(0.99)PS(0.0)PAS(0.0)GR s:Phosphorylated S SRRM2 300351.7 3 6 2.1 3310.34 HUMAN 1 3.7168 5.6223 TTASKTETPIVSKSL-p O95292;T150-p TTASKTETPIVSKSL 0.525170023338528 0.00190027809892951 -0.0913333333333333 -0.800333333333333 5.17421353318917 42.695653830168 -0.0913333333333333 -0.800333333333333 0.303793618405194 5.37569495963849e-05 -1.13588991122733 -11.4128890489496 O95292 VAPB O95292.T150.p_VAPB O95292_T150t _1_1_150_150 O95292 O95292 Vesicle-associated membrane protein-associated protein B/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17944.17944.3 14.42 14.42 2.611 7 1 1 0 815.1391 2363.4364 T150t TMT10 140 (K) IISTTASKTEtPIVSK (S) IIS(0.0)T(0.0)T(0.0)AS(0.0)KT(0.0)ET(0.99)PIVS(0.0)K K:TMT10,t:Phosphorylated T VAPB 27456.1 6 3 1400.1 146.44 HUMAN 1 -5.1742 -42.6957 TTDASPQSPPTPQTT-p Q9P206-3;S658-p TTDASPQSPPTPQTT 0.338363197273083 0.0763317316243298 -0.168666666666667 0.267333333333333 8.75547178914949 14.8274834137388 -0.168666666666667 0.267333333333333 0.133184235180299 0.0329042244239737 -1.76603476918251 2.84432781876532 Q9P206 KIAA1522 Q9P206.3.S658.p_KIAA1522 Q9P206-3_S658s_1_1_658_658 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.31847.31847.5 8.32 5.71 1.586 12 1 1 0 1025.741 5043.7294 N633n S658s TMT10 631 (R) SPnPAAPALAAPAVVPGPVSTTDASPQsPPTPQTTLTPLQESPVISK (D) S(0.0)PN(1.0)PAAPALAAPAVVPGPVS(0.0)T(0.0)T(0.0)DAS(0.0)PQS(0.99)PPT(0.0)PQT(0.0)T(0.0)LT(0.0)PLQES(0.0)PVIS(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S KIAA1522 108782.6 2 29 62.1 704.36 HUMAN 1 -8.7555 14.8275 TTDLSIQSPSADLEV-p Q8IVF2;S4185-p TTDLSIQSPSADLEV 0.401275688666785 0.00187522448824152 -0.121666666666667 -0.920333333333333 7.32063215178638 42.8486078635889 -0.121666666666667 -0.920333333333334 0.185326184608549 5.18966367589418e-05 -1.517029641036 -11.489920568868 Q8IVF2 AHNAK2 Q8IVF2.S4185.p_AHNAK2 Q8IVF2_S4185s _1_1_4185_4185 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28994.28994.5 19.44 16.72 1.24 5 1 1 0 800.8376 3920.1835 S4185s TMT10 4178 (K) TTDLSIQsPSADLEVQAGQVDVKLPEGPLPK (G) T(0.0)T(0.0)DLS(0.0)IQS(0.99)PS(0.0)ADLEVQAGQVDVKLPEGPLPK K:TMT10,s:Phosphorylated S AHNAK2 617759.6 1 17 237.1 418.35 HUMAN 1 -7.3206 -42.8486 TTEEVFNSPRAGSPL-p Q9NRY4;S970-p TTEEVFNSPRAGSPL 0.701641473208462 0.766645172428387 0.0586666666666667 0.0296666666666667 2.89236029531734 1.59421459788116 0.0586666666666667 0.0296666666666667 0.513764356027352 0.692753199423096 0.698463359731464 0.416892036479185 Q9NRY4 ARHGAP35 Q9NRY4.S970.p_ARHGAP35 Q9NRY4_S970s _1_1_970_970 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20466.20466.4 34.38 28.46 1.156 6 1 1 0 934.9393 3656.7725 S970s TMT10 945 (K) KNIIEATHMYDNAAEACSTTEEVFNsPR (A) KNIIEAT(0.0)HMY(0.0)DNAAEACS(0.0)T(0.0)T(0.0)EEVFNS(0.99)PR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ARHGAP35 172051.4 12 4 247.1 410.47 HUMAN 1 2.8924 1.5942 TTENIDVSMDVKPSW-p Q96Q45-3;S229-p TTENIDVSMDVKPSW 0.357716781962321 0.0533844301144045 0.185 0.295666666666667 8.29907909559039 16.9706276121601 0.185 0.295666666666667 0.147942206055405 0.020088024934759 1.68700707494723 3.2543774485333 Q96Q45 TMEM237 Q96Q45.3.S229.p_TMEM237 Q96Q45-3_S229s _1_1_229_229 Q96Q45-3 Q96Q45-3|Q96Q45-5|Q96Q45-2 Isoform 3 of Transmembrane protein 237 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21449.21449.3 10.89 10.89 3.83 6 1 1 0 873.43 2538.3274 S229s TMT10 222 (K) TTENIDVsMDVKPSWTTR (D) T(0.0)T(0.0)ENIDVS(0.99)MDVKPS(0.0)WT(0.0)T(0.0)R K:TMT10,s:Phosphorylated S TMEM237 48471.6 1 4 2351.1 87.06 HUMAN 1 8.2991 16.9706 TTENRFHSLPFSLTK-p Q9NQC7;S418-p TTENRFHSLPFSLTK 0.189392859052769 0.0167711100029359 0.408 0.396333333333333 14.148528596074 24.5099464502259 0.408 0.396333333333333 0.0384722105076178 0.00354001706000629 2.72022955345078 4.91474438986705 Q9NQC7 CYLD Q9NQC7.S418.p_CYLD Q9NQC7_S418s _1_1_418_418 Q9NQC7 Q9NQC7|Q9NQC7-2|J3KRR7 Ubiquitin carboxyl-terminal hydrolase CYLD HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25292.25292.3 11.71 11.71 5.696 3 1 1 0 572.3154 1634.967 S418s TMT10 416 (R) FHsLPFSLTK (M) FHS(0.99)LPFS(0.0)LT(0.0)K K:TMT10,s:Phosphorylated S CYLD 109082.3 1 3 1585.1 129.45 HUMAN 1 14.1485 24.5099 TTERDSDTDVEEEEL-p Q14676;T455-p TTERDSDTDVEEEEL 0.442901411005622 0.072891332009289 0.140333333333333 0.213666666666667 6.51827950258019 15.1074187164655 0.140333333333333 0.213666666666667 0.22293181391827 0.0308502102624536 1.37639808131158 2.89671517227801 Q14676 MDC1 Q14676.T455.p_MDC1 Q14676_S453sT455t_2_2_453_455 Q14676 Q14676|Q14676-2|Q14676-3|Q14676-4 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12755.13171.3 15 15 4.085 6 2 2 0 1023.4319 2908.3493 S453s T455t TMT10 445 (R) SQTTTERDsDtDVEEEELPVENR (E) S(0.0)QT(0.0)T(0.0)T(0.0)ERDS(0.99)DT(0.99)DVEEEELPVENR s:Phosphorylated S,t:Phosphorylated T MDC1 227803.2 12 62 6.1 1662.62 HUMAN 1 6.5183 15.1074 TTFTREGSFRVTTAT-p P49757;S194-p TTFTREGSFRVTTAT 0.451943451197645 0.0935205629981604 0.113333333333333 0.227666666666667 6.36482724495506 13.6111494669999 0.113333333333333 0.227666666666667 0.230949632497394 0.0435396620025977 1.34930421766306 2.62027877809895 P49757 NUMB P49757.S194.p_NUMB P49757_S194s _1_1_194_194 P49757 P49757|P49757-3|P49757-2|P49757-4|G3V3Z8|P49757-5|P49757-6|P49757-7|P49757-8 Protein numb homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.39376.39962.4 18.69 18.69 4.201 4 1 1 0 713.3589 2770.4446 S194s TMT10 192 (R) EGsFRVTTATEQAEREEIMK (Q) EGS(0.99)FRVT(0.0)T(0.0)AT(0.0)EQAEREEIMK K:TMT10,s:Phosphorylated S NUMB 71487.2 11 1 538.1 277.23 HUMAN 1 6.3648 13.6111 TTGERSPSPLTGKVN-p Q9P2F8;S1652-p TTGERSPSPLTGKVN 0.16550315241392 0.0331990445246923 -0.322666666666667 -0.303333333333333 15.6334036477905 19.9403240519609 -0.322666666666667 -0.303333333333333 0.027331258844037 0.0101383573482955 -2.99811223212917 -3.86255436565229 Q9P2F8 SIPA1L2 Q9P2F8.S1652.p_SIPA1L2 Q9P2F8_S1652s _1_1_1652_1652 Q9P2F8 Q9P2F8|Q9P2F8-2 Signal-induced proliferation-associated 1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16628.16628.3 16.35 16.35 1.686 5 1 1 0 797.728 2311.2004 S1652s TMT10 1641 (K) EFMDTTGERSPsPLTGK (V) EFMDT(0.0)T(0.0)GERS(0.0)PS(0.99)PLT(0.0)GK K:TMT10,s:Phosphorylated S SIPA1L2 192488.1 3 16 322.1 363.46 HUMAN 1 -15.6334 -19.9403 TTHNLEVSPKEKQTE-p O75362;S662-p TTHNLEVSPKEKQTE 0.244674983927803 0.0283447568358296 -0.207 -0.305666666666667 11.696400099184 20.9639318752033 -0.207 -0.305666666666667 0.0676643618169183 0.00800952594428744 -2.27859731757119 -4.08488291777734 O75362 ZNF217 O75362.S662.p_ZNF217 O75362_S662s _1_1_662_662 O75362 O75362 Zinc finger protein 217 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13791.13791.3 15.86 11.78 5.073 5 1 1 0 867.4384 2520.3346 S662s TMT10 645 (K) ADVTPPPDGSTTHNLEVsPK (E) ADVT(0.0)PPPDGS(0.0)T(0.0)T(0.0)HNLEVS(0.99)PK K:TMT10,s:Phosphorylated S ZNF217 117152.8 7 10 394.1 330.8 HUMAN 1 -11.6964 -20.9639 TTHQRSHTGERPYKC-p Q14586;T655-p TTHQRSHTGERPYKC 0.175126391202982 0.00123561176676881 -0.241333333333333 -1.141 15.0626572948428 47.5866771784427 -0.241333333333333 -1.141 0.0311698182920404 1.74314005360602e-05 -2.89021088248853 -14.1329952160887 Q14586 ZNF267 Q14586.T655.p_ZNF267 Q14586_T655t _1_1_655_655 Q14586 Q9C0K0|Q9H165|Q9C0K0-2|Q9H165-6|A0A087X055|Q14586 Zinc finger protein 267 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.3681.3681.3 10.42 7.95 2.34 3 1 1 0 538.2803 1532.8585 T655t TMT10 653 (R) SHtGERPYK (C) S(0.0)HT(0.99)GERPY(0.0)K K:TMT10,t:Phosphorylated T ZNF267 89941.7 2 61 240.41 415.72 HUMAN 1 -15.0627 -47.5867 TTIHKVNSMVAYKIP-p Q13257;S195-p TTIHKVNSMVAYKIP 0.174825188071551 0.00825025034029923 0.282333333333333 -0.473 15.0887827113717 29.6458148809451 0.282333333333333 -0.473 0.0309828759985326 0.00108497195369535 2.89511909029956 -6.31522683148411 Q13257 MAD2L1 Q13257.S195.p_MAD2L1 Q13257_S195s _1_1_195_195 Q13257 Q13257 Mitotic spindle assembly checkpoint protein MAD2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24509.24509.3 12.12 12.12 8.316 2 1 1 0 663.3491 1908.0665 S195s TMT10 193 (K) VNsMVAYKIPVND (-) VNS(0.99)MVAY(0.0)KIPVND K:TMT10,s:Phosphorylated S MAD2L1 23680.7 1 2 5019.1 23.87 HUMAN 1 15.0888 -29.6458 TTIPMDESLQFNSSL-p I3NI02;S123-p TTIPMDESLQFNSSL 0.389737992008685 0.462461751656603 0.12 -0.0716666666666666 7.5703597895519 4.46637542868437 0.12 -0.0716666666666667 0.174970172927002 0.35757113837563 1.5605276641649 -1.00510704015047 I3NI02 NotFound I3NI02.S123.p_NotFound I3NI02_S123s _1_1_123_123 I3NI02 I3NI02|E7EQ34|A0A1W2PS81|A0A1W2PQM3|O14653-2|A0A1W2PRC2|A0A1W2PPG1 Golgi SNAP receptor complex member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.26410.26410.3 10.66 10.66 2.623 9 1 1 0 1120.2002 3278.6139 S123s TMT10 108 (R) TFTTNDSDTTIPMDEsLQFNSSLQK (V) T(0.0)FT(0.0)T(0.0)NDS(0.0)DT(0.0)T(0.0)IPMDES(0.99)LQFNS(0.0)S(0.0)LQK K:TMT10,s:Phosphorylated S GOSR2 29869.3 1 2 5556.1 18.21 HUMAN 1 7.5704 -4.4664 TTIRSEISPEGEKYK-p Q96PY6-3;S865-p TTIRSEISPEGEKYK 0.64124158099539 0.960319109896084 -0.0656666666666667 -0.00666666666666665 3.60349891604744 0.253529198239707 -0.0656666666666667 -0.00666666666666666 0.436164292621861 0.943294017681854 -0.840536348332164 -0.0744867722198739 Q96PY6 NEK1 Q96PY6.3.S865.p_NEK1 Q96PY6-3_S865s _1_1_865_865 Q96PY6-3 Q96PY6-3 Isoform 3 of Serine/threonine-protein kinase Nek1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9673.9673.2 9.07 9.07 4.255 2 1 1 0 757.3808 1433.7888 S865s TMT10 862 (R) SEIsPEGEK (Y) S(0.0)EIS(0.99)PEGEK K:TMT10,s:Phosphorylated S NEK1 146666.9 3 4 1537.1 133.31 HUMAN 1 -3.6035 -0.2535 TTISRALSQNRELKE-p Q08379;S540-p TTISRALSQNRELKE 0.160078188700121 0.21217919692056 -0.231333333333333 -0.314 15.9195111559004 8.85800666590925 -0.231333333333333 -0.314 0.0255887389885641 0.130076646961454 -3.05275079182789 -1.78315302637486 Q08379 GOLGA2 Q08379.S540.p_GOLGA2 Q08379_S540s _1_1_540_540 Q08379 Q08379|Q08379-2|A0A1W2PQY5 Golgin subfamily A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9045.9045.3 10.57 10.57 99 1 1 1 0 532.9673 1516.9211 S540s TMT10 538 (R) ALsQNRELK (E) ALS(1.0)QNRELK K:TMT10,s:Phosphorylated S GOLGA2 113711.9 2 7 458.1 306.2 HUMAN 1 -15.9195 -8.858 TTKGRVASFSIPGSS-p Q14573;S1832-p TTKGRVASFSIPGSS 0.412754403330661 0.00656985067540211 0.244333333333333 0.579 7.0891777689869 31.3819784284361 0.244333333333333 0.579 0.195470949746432 0.000727448339964713 1.47661445941172 6.85233931832459 Q14573 ITPR3 Q14573.S1832.p_ITPR3 Q14573_S1832s _1_1_1832_1832 Q14573 Q14573 Inositol 1,4,5-trisphosphate receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19418.19418.2 11.19 5.78 1.111 5 1 1 0 752.3746 1423.7743 S1832s TMT10 1830 (R) VAsFSIPGSSSR (Y) VAS(0.99)FS(0.0)IPGS(0.0)S(0.0)S(0.0)R s:Phosphorylated S ITPR3 307010.8 3 4 1377.1 148.68 HUMAN 1 7.0892 31.382 TTKIACKSPPPESMD-p P46013;S2105-p TTKIACKSPPPESMD 0.455652494519437 0.0233883970032613 -0.113666666666667 -0.476333333333333 6.2957586242408 22.2533877894115 -0.113666666666667 -0.476333333333333 0.234651933762174 0.00595197668129938 -1.33708420494541 -4.37541865983036 P46013 MKI67 P46013.S2105.p_MKI67 P46013_S2105s _1_1_2105_2105 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12497.12497.3 17.51 13.72 5.819 6 1 1 0 838.4106 2433.2518 S2105s TMT10 2101 (K) IACKsPPPESMDTPTSTR (R) IACKS(0.99)PPPES(0.0)MDT(0.0)PT(0.0)S(0.0)T(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MKI67 360912.4 7 70 5.1 1918.46 HUMAN 1 -6.2958 -22.2534 TTKIACKSPPPESVD-p P46013;S1131-p TTKIACKSPPPESVD 0.635097827088048 0.0041396896068766 -0.0636666666666667 -0.561333333333333 3.67523746838474 35.0632935153022 -0.0636666666666667 -0.561333333333333 0.429018730232497 0.000311652523985175 -0.854518546485134 -8.11754336094708 P46013 MKI67 P46013.S1131.p_MKI67 P46013_S1131s _1_1_1131_1131 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13436.13650.3 20.74 20.74 5.606 6 1 1 0 894.8052 2602.4365 S1131s TMT10 1127 (K) IACKsPPPESVDTPTSTK (Q) IACKS(0.99)PPPES(0.0)VDT(0.0)PT(0.0)S(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MKI67 360912.4 4 28 5.1 1918.46 HUMAN 1 -3.6752 -35.0633 TTKIACKSPQPDPVD-p P46013;S2344-p TTKIACKSPQPDPVD 0.322484991252955 0.00225192113407965 -0.175 -0.898 9.19972398683535 40.9978666840852 -0.175 -0.898 0.120234084621608 7.94718515834841e-05 -1.84294169899496 -10.5894237799834 P46013 MKI67 P46013.S2344.p_MKI67 P46013_S2344s _1_1_2344_2344 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14121.14121.3 18.02 13.59 5.559 4 1 1 0 893.8059 2599.4369 S2344s TMT10 2340 (K) IACKsPQPDPVDTPASTK (Q) IACKS(0.99)PQPDPVDT(0.0)PAS(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MKI67 360912.4 4 81 5.1 1918.46 HUMAN 1 -9.1997 -40.9979 TTKIACRSPQPDPVG-p P46013;S2223-p TTKIACRSPQPDPVG 0.318502959849602 0.00215840414867258 -0.176 -0.858333333333333 9.2975282290143 41.4173642614194 -0.176 -0.858333333333334 0.117556643386567 7.21545253032959e-05 -1.85987952395571 -10.787612536508 P46013 MKI67 P46013.S2223.p_MKI67 P46013_S2223s _1_1_2223_2223 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18615.18615.5 21.07 21.07 7.696 4 1 1 0 639.1506 3111.7592 S2223s TMT10 2219 (K) IACRsPQPDPVGTPTIFKPQSK (R) IACRS(0.99)PQPDPVGT(0.0)PT(0.0)IFKPQS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MKI67 360912.4 6 74 5.1 1918.46 HUMAN 1 -9.2975 -41.4174 TTKIPCDSPQSDPVD-p P46013;S1253-p TTKIPCDSPQSDPVD 0.259441883712572 0.0106824194482415 -0.238 -0.614666666666667 11.1245937000323 27.6435510573237 -0.238 -0.614666666666667 0.077186372316527 0.00172046124535746 -2.1779515991974 -5.73782965121645 P46013 MKI67 P46013.S1253.p_MKI67 P46013_S1253s _1_1_1253_1253 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15972.15972.2 17.06 14.35 1.203 6 1 1 0 1242.0885 2403.2114 S1253s TMT10 1249 (K) IPCDsPQSDPVDTPTSTK (Q) IPCDS(0.99)PQS(0.0)DPVDT(0.0)PT(0.0)S(0.0)T(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MKI67 360912.4 3 35 5.1 1918.46 HUMAN 1 -11.1246 -27.6436 TTKLEPASPPEDTSA-p Q9UHL9-3;S480-p TTKLEPASPPEDTSA 0.464416584532636 0.223850228934458 0.100333333333333 0.133333333333333 6.14585602298312 8.5625932794001 0.100333333333333 0.133333333333333 0.24289266374213 0.13923251629996 1.31050527361048 1.73205418675216 Q9UHL9 GTF2IRD1 Q9UHL9.3.S480.p_GTF2IRD1 Q9UHL9-3_S480s _1_1_480_480 Q9UHL9-3 Q9UHL9-3|E9PFE2|Q9UHL9-2 Isoform 3 of General transcription factor II-I repeat domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.12447.12447.3 19.11 19.11 3.98 6 1 1 0 890.1096 2588.3456 S480s TMT10 472 (K) DTTKLEPAsPPEDTSAEVSR (A) DT(0.0)T(0.0)KLEPAS(0.99)PPEDT(0.0)S(0.0)AEVS(0.0)R K:TMT10,s:Phosphorylated S GTF2IRD1 108946.5 2 1 5462.1 19.11 HUMAN 1 6.1459 8.5626 TTKRRRPTLGVQLDD-p Q13769;T328-p TTKRRRPTLGVQLDD 0.582881983636493 0.00490281983834805 -0.095 0.570333333333333 4.31256497186628 33.7035132271436 -0.095 0.570333333333333 0.370461859939406 0.000426234576649427 -0.976424753109411 7.6289088207515 Q13769 THOC5 Q13769.T328.p_THOC5 Q13769_T328t _1_1_328_328 Q13769 Q13769 THO complex subunit 5 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.15787.15787.3 8.88 8.88 99 1 1 1 0 593.9976 1700.0107 T328t TMT10 326 (R) RPtLGVQLDDK (R) RPT(1.0)LGVQLDDK K:TMT10,t:Phosphorylated T THOC5 79248.1 3 5 2086.1 98.12 HUMAN 1 -4.3126 33.7035 TTKSKELSPGSAQKG-p Q17R89;S596-p TTKSKELSPGSAQKG 0.386739858215171 0.0123895111082212 0.163333333333333 -0.597666666666667 7.63703178975314 26.6103325954632 0.163333333333333 -0.597666666666666 0.172304579806501 0.00218256275837947 1.57212441448965 -5.45614191358698 Q17R89 ARHGAP44 Q17R89.S596.p_ARHGAP44 Q17R89_S596s _1_1_596_596 Q17R89 Q17R89|Q17R89-3|E7ERK8 Rho GTPase-activating protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9266.9266.3 11.25 6.41 3.121 3 1 1 0 633.6918 1819.0892 S596s TMT10 592 (K) SKELsPGSAQK (G) S(0.0)KELS(0.99)PGS(0.0)AQK K:TMT10,s:Phosphorylated S ARHGAP44 89872.8 2 1 4672.1 28.14 HUMAN 1 7.637 -26.6103 TTKSRPETPKQKGES-p Q6KC79;T702-p TTKSRPETPKQKGES 0.820904102287946 0.00112568182952083 0.088 1.05 1.65018664287946 49.1967846263848 0.0880000000000001 1.05023516818818 0.683882256049993 1.203154881281e-05 0.429859976884432 15.1557955045117 Q6KC79 NIPBL Q6KC79.T702.p_NIPBL Q6KC79_T702t _1_1_702_702 Q6KC79 Q6KC79|Q6KC79-2|Q6KC79-3 Nipped-B-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4008.4008.2 8.18 2.95 2.387 2 1 1 0 676.871 1272.7676 T702t TMT10 698 (K) SRPEtPK (Q) S(0.0)RPET(0.99)PK K:TMT10,t:Phosphorylated T NIPBL 318099.5 1 12 50.1 752.87 HUMAN 1 1.6502 49.1968 TTLAGPLTPPVKHFQ-p A0A0C4DFX9;T168-p TTLAGPLTPPVKHFQ 0.572796665055968 0.125163643495451 0.0753333333333333 0.168 4.45339513599948 11.901160957572 0.0753333333333333 0.168 0.358641453857239 0.0645481655581016 1.00286348517052 2.31367224193425 A0A0C4DFX9 NELFA A0A0C4DFX9.T168.p_NELFA A0A0C4DFX9_T168t _1_1_168_168 A0A0C4DFX9 A0A0C4DFX9|Q9H3P2 Negative elongation factor A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26319.26319.2 18.08 14.78 5.095 3 1 1 0 1016.0876 1951.1992 T168t TMT10 158 (K) NALTTLAGPLtPPVK (H) NALT(0.0)T(0.0)LAGPLT(0.99)PPVK K:TMT10,t:Phosphorylated T NELFA 58726.5 5 1 1015.1 188.17 HUMAN 1 4.4534 11.9012 TTLAQPQSLERHKEQ-p Q9BZV1;S252-p TTLAQPQSLERHKEQ 0.485292660991449 0.148048547056461 0.251333333333333 0.219333333333333 5.78632737915264 10.9233151439984 0.251333333333333 0.219333333333333 0.263856174818828 0.0808478519486821 1.24640447228121 2.14172231886834 Q9BZV1 UBXN6 Q9BZV1.S252.p_UBXN6 Q9BZV1_S252s _1_1_252_252 Q9BZV1 Q9BZV1|Q9BZV1-2 UBX domain-containing protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.34544.34544.4 20.73 20.73 2.823 5 1 1 0 939.4662 3674.8639 S252s TMT10 226 (K) VLLPAQDQEDPEEFYVLSETTLAQPQsLER (H) VLLPAQDQEDPEEFY(0.0)VLS(0.0)ET(0.0)T(0.0)LAQPQS(0.99)LER s:Phosphorylated S UBXN6 50038.1 1 2 4004.1 39.3 HUMAN 1 5.7863 10.9233 TTLASKASPTLDFTE-p J3KQV8;S1604-p TTLASKASPTLDFTE 0.891631542288594 0.289398336280437 0.0276666666666666 0.105666666666667 0.973587927140965 7.10491445208838 0.0276666666666666 0.105666666666667 0.799173744211731 0.194763941442791 0.267240051866433 1.47895096823796 J3KQV8 SYNJ1 J3KQV8.S1604.p_SYNJ1 J3KQV8_S1604s _1_1_1604_1604 J3KQV8 J3KQV8|O43426|A0A0D9SGJ6 Synaptojanin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16651.16651.2 10.42 4.68 1.32 3 1 1 0 723.3479 1365.7212 S1604s TMT10 1603 (K) AsPTLDFTER (-) AS(0.99)PT(0.0)LDFT(0.0)ER s:Phosphorylated S SYNJ1 178858.1 6 13 677.1 246.73 HUMAN 1 0.9736 7.1049 TTLTRSASMKLPDNT-p E9PDI4;S408-p TTLTRSASMKLPDNT 0.786965652821659 0.461924765082517 -0.0753333333333333 -0.0916666666666666 2.0098814450337 4.47352547059665 -0.0753333333333334 -0.0916666666666667 0.629523367533969 0.356982932605699 -0.510989246624714 -1.00644382126932 E9PDI4 NotFound E9PDI4.S408.p_NotFound E9PDI4_S408s _1_1_408_408 E9PDI4 E9PDI4|O00515 Ladinin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15070.15070.3 14.34 14.34 2.1 3 1 1 0 686.7144 1978.161 S408s TMT10 406 (R) SAsMKLPDNTVK (L) S(0.0)AS(0.99)MKLPDNT(0.0)VK K:TMT10,s:Phosphorylated S LAD1 58791 6 8 769.1 228.41 HUMAN 1 -2.0099 -4.4735 TTMGDRFTDEEVDEL-p J3QRS3;T140-p TTMGDRFTDEEVDEL 0.299702423811655 0.726273562387725 -0.272333333333333 0.0346666666666667 9.83869816920451 1.9113353935067 -0.272333333333333 0.0346666666666667 0.103783946948291 0.643971223115106 -1.95369997263929 0.489019985505969 J3QRS3 MYL12A J3QRS3.T140.p_MYL12A J3QRS3_T140t _1_1_140_140 J3QRS3 J3QRS3 Myosin regulatory light chain 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27865.27865.4 21.11 16.09 2.302 4 1 1 0 906.6957 3543.7929 T140t TMT10 130 (R) ELLTTMGDRFtDEEVDELYREAPIDK (K) ELLT(0.0)T(0.0)MGDRFT(0.99)DEEVDELY(0.0)REAPIDK K:TMT10,t:Phosphorylated T MYL12A 20513.6 3 3 2636.1 75.75 HUMAN 1 -9.8387 1.9113 TTMLLPASPAKAPET-p Q9UGU5;S512-p TTMLLPASPAKAPET 0.164162708749184 0.0243788336347201 -0.502 0.300333333333333 15.716757447224 21.974954597135 -0.502 0.300333333333333 0.0268116940679322 0.00634606535374648 -3.01399171934575 4.31165166747845 Q9UGU5 HMGXB4 Q9UGU5.S512.p_HMGXB4 Q9UGU5_S512s _1_1_512_512 Q9UGU5 Q9UGU5 HMG domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19621.19621.4 18.74 18.74 16.593 4 1 1 0 577.3348 2226.3499 S512s TMT10 501 (K) KSPPTTMLLPAsPAK (A) KS(0.0)PPT(0.0)T(0.0)MLLPAS(0.99)PAK K:TMT10,s:Phosphorylated S HMGXB4 66052.7 5 6 1005.1 189.25 HUMAN 1 -15.7168 21.975 TTNKPVKSPTPTVNP-p Q8WY36;S159-p TTNKPVKSPTPTVNP 0.250345564803187 0.00526062627901912 -0.170333333333333 -0.592 11.4802011076009 33.1346188535897 -0.170333333333333 -0.592 0.0711180580439148 0.000485890171858841 -2.24046117475364 -7.4320838126613 Q8WY36 BBX Q8WY36.S159.p_BBX Q8WY36_S159s _1_1_159_159 Q8WY36 Q8WY36|Q8WY36-2|C9JA69|Q8WY36-3 HMG box transcription factor BBX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13867.13867.3 13.86 13.86 1.401 5 1 1 0 983.2006 2867.6169 S159s TMT10 149 (K) WCPTTNKPVKsPTPTVNPR (K) WCPT(0.0)T(0.0)NKPVKS(0.99)PT(0.0)PT(0.0)VNPR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BBX 106212.3 5 1 621.1 259.66 HUMAN 1 -11.4802 -33.1346 TTNPFYNTM______-p F5H527;T1449-p TTNPFYNTM______ 0.426515655420314 0.717708952220834 0.116333333333333 -0.0433333333333334 6.81757904383135 1.982466655345 0.116333333333333 -0.0433333333333334 0.208085632838936 0.633509795522239 1.42904206940882 -0.504857217523797 F5H527 SSH2 F5H527.T1449.p_SSH2 F5H527_T1449t _1_1_1449_1449 F5H527 F5H527|Q76I76 Protein phosphatase Slingshot homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16240.16240.2 13.63 13.63 9.716 4 1 1 0 777.355 1473.7358 T1449t TMT10 1441 (K) RTTNPFYNtM (-) RT(0.0)T(0.0)NPFY(0.0)NT(0.99)M t:Phosphorylated T SSH2 162969.8 9 12 998.1 190.13 HUMAN 1 6.8176 -1.9825 TTPANLDSESEHFFR-p Q13315;S1891-p TTPANLDSESEHFFR 0.636743873817189 0.0901618401314303 0.0803333333333333 0.22 3.65651183334782 13.8280033325939 0.0803333333333333 0.22 0.430872539780922 0.0414190054789888 0.850874375302876 2.65982174536431 Q13315 ATM Q13315.S1891.p_ATM Q13315_S1891s _1_1_1891_1891 Q13315 Q13315 Serine-protein kinase ATM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18262.18262.3 16.89 16.89 1.231 5 1 1 0 716.3246 2066.9981 S1891s TMT10 1883 (R) STTPANLDsESEHFFR (C) S(0.0)T(0.0)T(0.0)PANLDS(0.99)ES(0.0)EHFFR s:Phosphorylated S ATM 355759 1 4 2613.1 76.72 HUMAN 1 3.6565 13.828 TTPGPSLSQGVSVDE-p O60934;S343-p TTPGPSLSQGVSVDE 0.149024470822507 0.428983830333575 0.284 0.0753333333333334 16.6776629511498 4.89324789409752 0.284 0.0753333333333334 0.021489865872691 0.324097148939613 3.19941456587146 1.08424324519961 O60934 NBN O60934.S343.p_NBN O60934_S343s _1_1_343_343 O60934 O60934|A0A0C4DG07 Nibrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16939.16939.3 14.09 14.09 2.429 6 1 1 0 747.7185 2161.1753 S343s TMT10 335 (K) TTTPGPSLsQGVSVDEK (L) T(0.0)T(0.0)T(0.0)PGPS(0.0)LS(0.99)QGVS(0.0)VDEK K:TMT10,s:Phosphorylated S NBN 85642.2 2 4 562.1 271.59 HUMAN 1 16.6777 4.8932 TTPIKNGSPEIKLKI-p O96028-3;S121-p TTPIKNGSPEIKLKI 0.505321852737979 0.00298089814036961 -0.129333333333333 -0.741 5.47531943334383 38.01091978374 -0.129333333333333 -0.741 0.283444514601696 0.0001580913185319 -1.19049385325017 -9.27170891688544 O96028 WHSC1 O96028.3.S121.p_WHSC1 O96028-3_S121s _1_1_121_121 O96028-3 O96028-3|O96028-5|O96028-6|O96028-7 Isoform 3 of Histone-lysine N-methyltransferase NSD2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17236.17236.3 16.26 9.87 2.315 4 1 1 0 896.836 2608.5277 S121s TMT10 107 (K) GIGTPPNTTPIKNGsPEIK (L) GIGT(0.0)PPNT(0.0)T(0.0)PIKNGS(0.99)PEIK K:TMT10,s:Phosphorylated S NSD2 72093.4 7 5 410.1 322.95 HUMAN 1 -5.4753 -38.0109 TTPILRASARRHRS_-p Q15021;S1395-p TTPILRASARRHRS_ 0.211979717569852 0.00919514367416896 0.354666666666667 -0.449 13.0075938396034 28.7810107914221 0.354666666666667 -0.449 0.0500311650322985 0.00132403333940757 2.51243538196132 -6.06055170960397 Q15021 NCAPD2 Q15021.S1395.p_NCAPD2 Q15021_S1395s _1_1_1395_1395 Q15021 Q15021 Condensin complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9200.9200.3 7.96 7.96 7.958 3 1 1 0 465.5965 1314.8055 S1395s TMT10 1388 (K) TTPILRAsAR (R) T(0.0)T(0.0)PILRAS(0.99)AR s:Phosphorylated S NCAPD2 158605.7 1 10 1192.1 168.06 HUMAN 1 13.0076 -28.781 TTPKAVVSPPKFVFG-p P49792;S2510-p TTPKAVVSPPKFVFG 0.798947574257861 0.0066063112490667 -0.0436666666666667 -0.505666666666667 1.87858570705062 31.3354869383217 -0.0436666666666667 -0.505666666666667 0.64884569768603 0.000735277550290456 -0.481742871265991 -6.83748802088524 P49792 RANBP2 P49792.S2510.p_RANBP2 P49792_S2510s _1_1_2510_2510 P49792 P49792|J3KNE0|A6NKT7|Q7Z3J3|A0A286YES2|F8VYC4|P0DJD1|A0A1W2PNU4|P0DJD0 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25312.25723.3 18.66 18.66 6.224 3 1 1 0 815.7975 2365.4098 S2510s TMT10 2507 (K) AVVsPPKFVFGSESVK (S) AVVS(0.99)PPKFVFGS(0.0)ES(0.0)VK K:TMT10,s:Phosphorylated S RANBP2 362585.9 6 54 9.1 1298.62 HUMAN 1 -1.8786 -31.3355 TTPLQERSLGLDINM-p Q96H22-3;S226-p TTPLQERSLGLDINM 0.818842838973662 0.00961529443269694 0.039 -0.748666666666667 1.67276542047018 28.4413277374996 0.039 -0.748666666666667 0.680336008895935 0.00143175011362061 0.43504900735287 -5.96274824924893 Q96H22 CENPN Q96H22.3.S226.p_CENPN Q96H22-3_S226s _1_1_226_226 Q96H22-3 Q96H22-3|Q96H22-4|Q96H22-5 Isoform 3 of Centromere protein N HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19288.19288.2 10.68 10.68 10.684 2 1 1 0 650.7846 1220.594 S226s Hydrogen 226 (R) sLGLDINMDSR (I) S(0.99)LGLDINMDS(0.0)R s:Phosphorylated S CENPN 41478.9 2 2 2611.1 76.75 HUMAN 1 1.6728 -28.4413 TTPRRSRSVSPCSNV-p Q9UQ35;S952-p TTPRRSRSVSPCSNV 0.329531482604701 0.00782489085563666 0.137333333333333 0.535666666666667 9.01154699550332 30.0538499853834 0.137333333333333 0.535666666666667 0.125558263434623 0.000987677138671855 1.81036176450927 6.43829505554062 Q9UQ35 SRRM2 Q9UQ35.S952.p_SRRM2 Q9UQ35_S952sS954s_2_2_952_954 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.7934.7934.2 9.03 9.03 2.322 4 2 2 0 805.8277 1450.7158 S952s S954s TMT10 952 (R) sVsPCSNVESR (L) S(0.99)VS(0.99)PCS(0.0)NVES(0.0)R C:Carbamidomethylation,s:Phosphorylated S SRRM2 300351.7 4 195 2.1 3310.34 HUMAN 1 9.0115 30.0538 TTPTQPLTPLHVVTQ-p O15014;T823-p TTPTQPLTPLHVVTQ 0.579965732613118 0.201818842036524 -0.0846666666666667 -0.250666666666667 4.35144169457103 9.14405985160441 -0.0846666666666667 -0.250666666666667 0.367160396803262 0.121785060116093 -0.983739663574184 -1.8326324794126 O15014 ZNF609 O15014.T823.p_ZNF609 O15014_T823t _1_1_823_823 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22742.22742.3 19.08 19.08 2 7 1 1 0 1124.2612 3290.7996 T823t TMT10 813 (R) LENTTPTQPLtPLHVVTQNGAEASSVK (T) LENT(0.0)T(0.0)PT(0.0)QPLT(0.99)PLHVVT(0.0)QNGAEAS(0.0)S(0.0)VK K:TMT10,t:Phosphorylated T ZNF609 152443.5 1 23 63.1 699.07 HUMAN 1 -4.3514 -9.1441 TTPVKKDSPKNITLL-p O75398;S318-p TTPVKKDSPKNITLL 0.204437470687119 0.0969959930013979 -0.380666666666667 0.186333333333333 13.3493121888372 13.4002039659089 -0.380666666666667 0.186333333333333 0.0462454256502751 0.0457066723024191 -2.57420577377979 2.58196874397515 O75398 DEAF1 O75398.S318.p_DEAF1 O75398_S318s _1_1_318_318 O75398 O75398 Deformed epidermal autoregulatory factor 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13108.13108.4 10.44 5.21 1.281 3 1 1 0 670.6299 2599.5477 S318s TMT10 306 (K) ENELPTTPVKKDsPK (N) ENELPT(0.0)T(0.0)PVKKDS(0.99)PK K:TMT10,s:Phosphorylated S DEAF1 60239.3 1 3 3263.1 55.6 HUMAN 1 -13.3493 13.4002 TTQANRMSVDAVEIE-p P78347;S103-p TTQANRMSVDAVEIE 0.349309518247647 0.812972408984195 -0.188333333333333 0.0306666666666667 8.48619425153202 1.25874768216327 -0.188333333333333 0.0306666666666667 0.141703499225879 0.748385271410811 -1.71941600196287 0.337545349791504 P78347 GTF2I P78347.S103.p_GTF2I P78347_S103s _1_1_103_103 P78347 P78347|P78347-3|P78347-4|P78347-2|P78347-5 General transcription factor II-I HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17429.17429.4 12.83 7.25 2.204 5 1 1 0 697.6174 2707.4813 S103s TMT10 95 (K) STTQANRMsVDAVEIETLRK (T) S(0.0)T(0.0)T(0.0)QANRMS(0.99)VDAVEIET(0.0)LRK K:TMT10,s:Phosphorylated S GTF2I 112927.8 3 2 140.1 523.54 HUMAN 1 -8.4862 1.2587 TTQDSQPSPLALLAA-p Q02086-2;S26-p TTQDSQPSPLALLAA 0.274349481664046 0.0679298566354982 0.165 0.251333333333333 10.6292083156572 15.5384989636428 0.165 0.251333333333333 0.0865125609928984 0.0279350918490982 2.09126958654712 2.97804101746454 Q02086 SP2 Q02086.2.S26.p_SP2 Q02086-2_S26s _1_1_26_26 Q02086-2 Q02086-2|Q9BRW5 Isoform 2 of Transcription factor Sp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36817.36817.4 19.52 19.52 1.685 11 1 1 0 985.9829 3860.9425 S26s Acetyl 2 (M) AATAAVSPSDYLQPAASTTQDSQPsPLALLAATCSK (I) AAT(0.0)AAVS(0.0)PS(0.0)DY(0.0)LQPAAS(0.0)T(0.0)T(0.0)QDS(0.0)QPS(0.99)PLALLAAT(0.0)CS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SP2 64779.7 1 3 950.1 196.36 HUMAN 1 10.6292 15.5385 TTQSGQMSGEGKAGP-p Q16630-2;S181-p TTQSGQMSGEGKAGP 0.102728705875057 0.721396674493311 0.457666666666667 -0.04 20.8671533116073 1.95529748425681 0.457666666666667 -0.04 0.00819001446571769 0.637485412884055 4.06757193349431 -0.498821988826155 Q16630 CPSF6 Q16630.2.S181.p_CPSF6 Q16630-2_S181s _1_1_181_181 Q16630-2 Q16630-2|Q16630-3|F8WJN3 Isoform 2 of Cleavage and polyadenylation specificity factor subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6102.6102.2 15.07 15.07 4.454 4 1 1 0 874.919 1668.8627 S181s TMT10 174 (K) TTQSGQMsGEGK (A) T(0.0)T(0.0)QS(0.0)GQMS(0.99)GEGK K:TMT10,s:Phosphorylated S CPSF6 63640.9 7 1 1308.1 155.75 HUMAN 1 20.8672 -1.9553 TTQVCNESPHGDGYS-p Q92628;S814-p TTQVCNESPHGDGYS 0.108078410418423 0.0185273565783714 0.310666666666667 0.437 20.3421522983657 23.8391952809718 0.310666666666667 0.437 0.00924240020917707 0.00413124044058903 3.95276774201659 4.75008866710281 Q92628 KIAA0232 Q92628.S814.p_KIAA0232 Q92628_S814s _1_1_814_814 Q92628 Q92628 Uncharacterized protein KIAA0232 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15682.15682.3 21.52 21.52 5.834 6 1 1 0 1022.1398 2984.446 S814s TMT10 804 (K) NFETTQVCNEsPHGDGYSSGVIK (D) NFET(0.0)T(0.0)QVCNES(0.99)PHGDGY(0.0)S(0.0)S(0.0)GVIK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIAA0232 157125.3 4 7 568.1 270.65 HUMAN 1 20.3422 23.8392 TTRRNSNSPPSPSSM-p Q7Z5L9;S457-p TTRRNSNSPPSPSSM 0.136418528311102 0.00680825242509749 0.282 0.473666666666667 17.7403835598376 31.0963259753628 0.282 0.473666666666667 0.0168252545736563 0.000776904080470154 3.409913246014 6.76150701100687 Q7Z5L9 IRF2BP2 Q7Z5L9.S457.p_IRF2BP2 Q7Z5L9_S457s _1_1_457_457 Q7Z5L9 Q7Z5L9|Q7Z5L9-2|Q7Z5L9-3 Interferon regulatory factor 2-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6208.6620.2 15.9 10.91 2.601 5 1 1 0 906.4012 1731.8282 S457s TMT10 454 (R) NSNsPPSPSSMNQR (R) NS(0.0)NS(0.99)PPS(0.0)PS(0.0)S(0.0)MNQR s:Phosphorylated S IRF2BP2 61765.3 8 12 154.1 504.92 HUMAN 1 17.7404 31.0963 TTSARELSPSSLKMN-p O15021;S1863-p TTSARELSPSSLKMN 0.610303320850575 0.2757728594683 -0.121666666666667 0.112333333333333 3.97302345739418 7.37205714371607 -0.121666666666667 0.112333333333333 0.400587740641519 0.183144670664411 -0.911969506875452 1.52555125368473 O15021 MAST4 O15021.S1863.p_MAST4 O15021_S1863s _1_1_1863_1863 O15021 O15021|J3QT34|O15021-1|E7EWQ5|O15021-3 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17273.17273.2 11.67 2.44 1.451 3 1 1 0 699.8856 1318.7982 S1863s TMT10 1861 (R) ELsPSSLK (M) ELS(0.99)PS(0.0)S(0.0)LK K:TMT10,s:Phosphorylated S MAST4 286597.7 2 12 121.99 549.41 HUMAN 1 -3.973 7.3721 TTSFFLNSPEKEHQE-p Q8WYP5-2;S1318-p TTSFFLNSPEKEHQE 0.16550315241392 0.00114422820507021 -0.243333333333333 -1.03066666666667 15.6285448427564 48.7636137831282 -0.243333333333333 -1.03066666666667 0.0273618536539747 1.32934780158859e-05 -2.99718756834104 -14.8738664264469 Q8WYP5 AHCTF1 Q8WYP5.2.S1318.p_AHCTF1 Q8WYP5-2_S1318s _1_1_1318_1318 Q8WYP5-2 Q8WYP5-2|Q8WYP5-3 Isoform 2 of Protein ELYS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19566.19566.4 23.4 23.4 5.136 6 1 1 0 917.1977 3585.7986 S1318s TMT10 1311 (R) TTSFFLNsPEKEHQEMDEGSQSLEK (L) T(0.0)T(0.0)S(0.0)FFLNS(0.99)PEKEHQEMDEGS(0.0)QS(0.0)LEK K:TMT10,s:Phosphorylated S AHCTF1 258049.6 17 17 40.1 829.79 HUMAN 1 -15.6285 -48.7636 TTSGGCHSPEDTPKD-p Q08379;S66-p TTSGGCHSPEDTPKD 0.253185624491412 0.137014495863601 -0.343666666666667 0.173666666666667 11.3731033486602 11.3750629653224 -0.343666666666667 0.173666666666667 0.0728936446215438 0.0728607610863994 -2.22160779242141 2.22091161542707 Q08379 GOLGA2 Q08379.S66.p_GOLGA2 Q08379_S66s _1_1_66_66 Q08379 Q08379 Golgin subfamily A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6102.6102.3 22.77 21.15 5.099 7 1 1 0 904.406 2631.2357 S66s TMT10 52 (K) NGSNPETTTSGGCHsPEDTPK (D) NGS(0.0)NPET(0.0)T(0.0)T(0.0)S(0.0)GGCHS(0.99)PEDT(0.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GOLGA2 113711.9 11 2 458.1 306.2 HUMAN 1 -11.3731 11.3751 TTSHGQSSQGIVEET-p Q96RL1;S402-p TTSHGQSSQGIVEET 0.231372003853837 0.0543225068969627 0.194666666666667 0.251 12.221305035165 16.8652364463283 0.194666666666667 0.251 0.0599610868842251 0.0205814683420013 2.3716505258921 3.23369921042075 Q96RL1 UIMC1 Q96RL1.S402.p_UIMC1 Q96RL1_S402s _1_1_402_402 Q96RL1 Q96RL1|Q96RL1-3 BRCA1-A complex subunit RAP80 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23492.23492.4 24.59 24.59 1.104 12 1 1 0 1231.1188 4841.4693 S402s TMT10 388 (K) LLLEEEPTTSHGQSsQGIVEETSEEGNSVPASQSVAALTSKR (S) LLLEEEPT(0.0)T(0.0)S(0.0)HGQS(0.0)S(0.99)QGIVEET(0.0)S(0.0)EEGNS(0.0)VPAS(0.0)QS(0.0)VAALT(0.0)S(0.0)KR K:TMT10,s:Phosphorylated S UIMC1 80924.2 3 10 339.1 354.34 HUMAN 1 12.2213 16.8652 TTSQRNASPNSEPCS-p Q9P1Q0;S541-p TTSQRNASPNSEPCS 0.370292355906484 0.0117213506312964 0.126666666666667 0.402333333333333 8.00040872466407 27.0045967753933 0.126666666666667 0.402333333333333 0.15847440414856 0.00199315155351771 1.63523151316578 5.56238236981036 Q9P1Q0 VPS54 Q9P1Q0.S541.p_VPS54 Q9P1Q0_S541s _1_1_541_541 Q9P1Q0 Q9P1Q0|Q9P1Q0-2|Q9P1Q0-4|Q9P1Q0-3 Vacuolar protein sorting-associated protein 54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9534.9534.3 19.15 19.15 1.124 12 1 1 0 1128.8114 3304.4469 S541s TMT10 539 (R) NAsPNSEPCSSDSVSEPECTTDSSSSK (E) NAS(0.99)PNS(0.0)EPCS(0.0)S(0.0)DS(0.0)VS(0.0)EPECT(0.0)T(0.0)DS(0.0)S(0.0)S(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VPS54 111614 2 1 5457.1 19.15 HUMAN 1 8.0004 27.0046 TTSRRGRSPSPKPRG-p Q9UQ35;S1762-p TTSRRGRSPSPKPRG 0.0782221681558717 0.057381518122085 0.447333333333333 0.247333333333333 23.6321940151681 16.5373166702174 0.447333333333333 0.247333333333333 0.00433291928050383 0.0221956737705176 4.70548804408582 3.16971917032778 Q9UQ35 SRRM2 Q9UQ35.S1762.p_SRRM2 Q9UQ35_S1762sS1764s_2_2_1762_1764 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3089.3089.3 7.43 7.43 99 2 2 2 0 457.556 1210.7218 S1762s S1764s Hydrogen 1760 (R) GRsPsPKPR (G) GRS(1.0)PS(1.0)PKPR K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 23 225 2.1 3310.34 HUMAN 1 23.6322 16.5373 TTSSSGVSPRNSLEV-p Q5QP82-2;S354-p TTSSSGVSPRNSLEV 0.0775649771385732 0.00771566358116936 0.574 -0.457666666666667 23.748717042047 30.163859484058 0.574 -0.457666666666667 0.00421821096032211 0.000962972869446374 4.73368749891472 -6.47180144783603 Q5QP82 DCAF10 Q5QP82.2.S354.p_DCAF10 Q5QP82-2_S354s _1_1_354_354 Q5QP82-2 Q5QP82-2 Isoform 2 of DDB1- and CUL4-associated factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4480.4480.2 10.98 7.75 3.77 6 1 1 0 644.3116 1207.648 S354s TMT10 347 (R) TTSSSGVsPR (N) T(0.0)T(0.0)S(0.0)S(0.0)S(0.0)GVS(0.99)PR s:Phosphorylated S DCAF10 57709 1 3 2092.1 97.98 HUMAN 1 23.7487 -30.1639 TTSTFSVSGDEDNVK-p Q8NEV8;S1238-p TTSTFSVSGDEDNVK 0.223753874775482 0.035676105191951 -0.188 -0.300333333333333 12.494075680428 19.4868366893929 -0.188 -0.300333333333333 0.056310895249755 0.0112542441121542 -2.42028907240576 -3.76626582314692 Q8NEV8 EXPH5 Q8NEV8.S1238.p_EXPH5 Q8NEV8_S1238s _1_1_1238_1238 Q8NEV8 Q8NEV8 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15491.15491.3 15.25 15.25 1.679 6 1 1 0 709.0084 2045.0439 S1238s TMT10 1231 (K) TTSTFSVsGDEDNVK (C) T(0.0)T(0.0)S(0.0)T(0.0)FS(0.0)VS(0.99)GDEDNVK K:TMT10,s:Phosphorylated S EXPH5 223884.5 1 18 129.1 537.25 HUMAN 1 -12.4941 -19.4868 TTSTQRPSSPETATK-p Q9UQ35;S322-p TTSTQRPSSPETATK 0.202846697385928 0.0124943875935368 -0.338 0.400333333333333 13.4328891166944 26.5552327862987 -0.338 0.400333333333333 0.0453639735271566 0.00221042977182004 -2.58937168226817 5.44141482966264 Q9UQ35 SRRM2 Q9UQ35.S322.p_SRRM2 Q9UQ35_S322sS323s_2_2_322_323 Q9UQ35 Q9UQ35|Q9UQ35-2|Q9UQ35-3|A0A087X1W1 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13059.13059.5 20.02 12.73 1.105 12 2 2 0 934.8403 4510.2577 S322s S323s TMT10 303 (R) RGEGDAPFSEPGTTSTQRPssPETATKQPSSPYEDK (D) RGEGDAPFS(0.0)EPGT(0.0)T(0.0)S(0.0)T(0.0)QRPS(0.99)S(0.99)PET(0.0)AT(0.0)KQPS(0.0)S(0.0)PY(0.0)EDK K:TMT10,s:Phosphorylated S SRRM2 300351.7 23 172 2.1 3310.34 HUMAN 1 -13.4329 26.5552 TTTDSPVSPAQAASP-p Q96E09;S270-p TTTDSPVSPAQAASP 0.645352058762717 0.0166675499222752 -0.0656666666666667 0.347666666666667 3.55795884854843 24.5514277289994 -0.0656666666666667 0.347666666666667 0.440761969649406 0.00350636584365148 -0.831630107836793 4.9250532139833 Q96E09 FAM122A Q96E09.S270.p_FAM122A Q96E09_S270s _1_1_270_270 Q96E09 Q96E09 Protein FAM122A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32922.32922.2 24.92 21.21 1.339 9 1 1 0 1642.3352 3203.7088 S270s TMT10 261 (K) VSTTTDSPVsPAQAASPFIPLDELSSK (-) VS(0.0)T(0.0)T(0.0)T(0.0)DS(0.0)PVS(0.99)PAQAAS(0.0)PFIPLDELS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S FAM122A 30813.8 3 11 509.1 287.77 HUMAN 1 -3.558 24.5514 TTTGHLIYKCGGIDK-p Q5VTE0;Y29-p TTTGHLIYKCGGIDK 0.466667919827382 0.731449533722293 0.0983333333333333 0.0403333333333334 6.11045309452767 1.87194135887748 0.0983333333333333 0.0403333333333334 0.244880774717088 0.649839137954285 1.30421607813675 0.480197526437417 Q5VTE0 NotFound Q5VTE0.Y29.p_NotFound Q5VTE0_Y29y _1_1_29_29 Q5VTE0 Q05639|P68104|Q5VTE0|P68104-2|A0A087WVQ9|A0A087WV01 Putative elongation factor 1-alpha-like 3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12930.12980.3 17.21 7.28 12.706 5 1 1 0 553.6357 1578.9256 Y29y TMT10 21 (K) STTTGHLIyK (C) S(0.0)T(0.0)T(0.0)T(0.0)GHLIY(0.99)K K:TMT10,y:Phosphorylated Y EEF1A1P5 50526.4 4 1 26.1 67.85 HUMAN 1 6.1105 1.8719 TTTNECPSPDTSQNT-p Q8IZD2;S1340-p TTTNECPSPDTSQNT 0.805930071607606 0.0151033529364653 0.037 0.381666666666667 1.80685714206514 25.1924646459354 0.037 0.381666666666667 0.659651092119719 0.00302519612481617 0.46559122313409 5.0862757851948 Q8IZD2 KMT2E Q8IZD2.S1340.p_KMT2E Q8IZD2_S1340s _1_1_1340_1340 Q8IZD2 Q8IZD2|Q8IZD2-2 Histone-lysine N-methyltransferase 2E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27960.27960.4 18.57 18.57 1.353 9 1 1 0 1161.5087 4563.0526 S1340s TMT10 1313 (K) GPVPSFSELMEDPDPENPEPTTTNECPsPDTSQNTCK (S) GPVPS(0.0)FS(0.0)ELMEDPDPENPEPT(0.0)T(0.0)T(0.0)NECPS(0.99)PDT(0.0)S(0.0)QNT(0.0)CK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2E 207015.2 1 10 544.1 275.86 HUMAN 1 1.8069 25.1925 TTTVTRCSPTVAFVE-p Q9UPQ0-4;S658-p TTTVTRCSPTVAFVE 0.456017533011544 0.764735510137516 -0.102666666666667 -0.0313333333333333 6.28947431198494 1.60884804675606 -0.102666666666667 -0.0313333333333333 0.234991724734311 0.690422912186245 -1.33597154277391 -0.420278418954659 Q9UPQ0 LIMCH1 Q9UPQ0.4.S658.p_LIMCH1 Q9UPQ0-4_S658s _1_1_658_658 Q9UPQ0-4 Q9UPQ0-3|G5EA03|Q9UPQ0-4|Q9UPQ0-2|E7EPK0|Q9UPQ0-9|Q9UPQ0-10|D6RD46|E9PDJ9|Q9UPQ0-5|Q9UPQ0-6|Q9UPQ0-8 Isoform 4 of LIM and calponin homology domains-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29259.29259.3 23.48 20.63 1.142 4 1 1 0 811.4171 2352.2674 S658s TMT10 657 (R) CsPTVAFVEFPSSPQLK (N) CS(0.99)PT(0.0)VAFVEFPS(0.0)S(0.0)PQLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LIMCH1 121463.5 4 14 679.1 246.52 HUMAN 1 -6.2895 -1.6088 TTVDTRRSPDVLKDF-p O95833;S49-p TTVDTRRSPDVLKDF 0.590040864524148 0.0169961888261017 -0.075 0.356 4.22180118029649 24.4147296239283 -0.075 0.356 0.378285663083617 0.00361848717426524 -0.959296694729628 4.89113745732877 O95833 CLIC3 O95833.S49.p_CLIC3 O95833_S49s _1_1_49_49 O95833 O95833 Chloride intracellular channel protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21414.21620.4 12.24 12.24 1.129 5 1 1 0 660.8684 2560.4863 S49s TMT10 36 (K) GVPFTLTTVDTRRsPDVLK (D) GVPFT(0.0)LT(0.0)T(0.0)VDT(0.0)RRS(0.99)PDVLK K:TMT10,s:Phosphorylated S CLIC3 26933.3 9 1 4235.1 35 HUMAN 1 -4.2218 24.4147 TTVFSRRSPSDKDPS-p Q8NEV8;S910-p TTVFSRRSPSDKDPS 0.429386855686088 0.0522017678933545 -0.139 -0.241666666666667 6.75875178150909 17.1108190161923 -0.139 -0.241666666666667 0.210923428402724 0.0194499324961173 -1.41871433038469 -3.28197228166596 Q8NEV8 EXPH5 Q8NEV8.S910.p_EXPH5 Q8NEV8_S910s _1_1_910_910 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8528.8528.4 9.48 3.71 2.417 3 1 1 0 611.0695 2361.2865 S910s TMT10 910 (R) sPSDKDPSLGEREEK (D) S(0.99)PS(0.0)DKDPS(0.0)LGEREEK K:TMT10,s:Phosphorylated S EXPH5 223884.5 7 12 129.1 537.25 HUMAN 1 -6.7588 -17.1108 TTVGRRLSVGSSMRS-p Q8N370-3;S274-p TTVGRRLSVGSSMRS 0.378389324662461 0.00575422933881225 -0.128333333333333 0.505666666666667 7.79832377733945 32.4104204219708 -0.128333333333333 0.505666666666667 0.166022757274915 0.000574060887130527 -1.60015455287359 7.18775504753967 Q8N370 SLC43A2 Q8N370.3.S274.p_SLC43A2 Q8N370-3_S274s _1_1_274_274 Q8N370-3 Q8N370-3|Q8N370-2|Q8N370-4 Isoform 3 of Large neutral amino acids transporter small subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8241.8241.3 9.52 9.52 9.521 3 1 1 0 434.5576 1221.6935 S274s TMT10 272 (R) RLsVGSSMR (S) RLS(0.99)VGS(0.0)S(0.0)MR s:Phosphorylated S SLC43A2 64061.2 3 1 2771.1 71.22 HUMAN 1 -7.7983 32.4104 TTVGRSFSLSWRSHP-p Q2PPJ7;S696-p TTVGRSFSLSWRSHP 0.247048592039774 0.156725731018783 -0.214 0.148 11.5992316000286 10.5839337562168 -0.214 0.148 0.0691953387839169 0.0874191590513439 -2.26144442117342 2.0824697794325 Q2PPJ7 RALGAPA2 Q2PPJ7.S696.p_RALGAPA2 Q2PPJ7_S696s _1_1_696_696 Q2PPJ7 Q2PPJ7|Q2PPJ7-2 Ral GTPase-activating protein subunit alpha-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22709.22709.2 13.18 7.42 2.184 3 1 1 0 596.2931 1111.6098 S696s TMT10 694 (R) SFsLSWR (S) S(0.0)FS(0.99)LS(0.0)WR s:Phosphorylated S RALGAPA2 213219.4 1 2 2545.1 79.08 HUMAN 1 -11.5992 10.5839 TTVGVDGSLYKTHPQ-p P19367-3;S419-p TTVGVDGSLYKTHPQ 0.84395824803475 0.0410191468580623 -0.0306666666666667 0.265666666666667 1.42524468325452 18.5897218488307 -0.0306666666666667 0.265666666666667 0.720237171643836 0.0138365499463379 -0.377389379746168 3.57956027277458 P19367 HK1 P19367.3.S419.p_HK1 P19367-3_S419s _1_1_419_419 P19367-3 P19367-3|P19367-2|P19367-4 Isoform 3 of Hexokinase-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17032.17032.2 15 10.8 5.784 4 1 1 0 839.4454 1597.9201 S419s TMT10 412 (R) TTVGVDGsLYK (T) T(0.0)T(0.0)VGVDGS(0.99)LY(0.0)K K:TMT10,s:Phosphorylated S HK1 103934.5 2 5 2430.1 83.63 HUMAN 1 -1.4252 18.5897 TTVLQADSAEYAQPL-p Q96PD2-2;S632-p TTVLQADSAEYAQPL 0.348148722660151 0.0558162586623959 -0.146 0.233333333333333 8.51492906483945 16.6962104555045 -0.146 0.233333333333333 0.140769022057618 0.0213982843563191 -1.72439163617888 3.20065340972727 Q96PD2 DCBLD2 Q96PD2.2.S632.p_DCBLD2 Q96PD2-2_S632s _1_1_632_632 Q96PD2-2 Q96PD2-2 Isoform 2 of Discoidin, CUB and LCCL domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.29997.29997.4 15.65 15.65 1.369 5 1 1 0 816.175 3181.7055 S632s TMT10 623 (R) EVTTVLQADsAEYAQPLVGGIVGTLHQR (S) EVT(0.0)T(0.0)VLQADS(0.99)AEY(0.0)AQPLVGGIVGT(0.0)LHQR s:Phosphorylated S DCBLD2 87624.9 1 1 3585.1 47.68 HUMAN 1 -8.5149 16.6962 TTVRTVASATTAIEI-p Q96D71;S261-p TTVRTVASATTAIEI 0.0814186305458657 0.00575422933881225 0.367 0.628 23.2683849198316 32.4244925860799 0.367 0.628 0.00471152508820256 0.00057220380496408 4.61816159162733 7.19243755311425 Q96D71 REPS1 Q96D71.S261.p_REPS1 Q96D71_S261s _1_1_261_261 Q96D71 Q96D71 RalBP1-associated Eps domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18256.18256.2 12.39 7.25 1.106 4 1 1 0 771.4115 1461.8474 S261s TMT10 258 (R) TVAsATTAIEIR (R) T(0.0)VAS(0.99)AT(0.0)T(0.0)AIEIR s:Phosphorylated S REPS1 86831.7 1 21 226.1 425.21 HUMAN 1 23.2684 32.4245 TTYVTDKSEEDNEIE-p P52701;S219-p TTYVTDKSEEDNEIE 0.378389324662461 0.640721319924162 -0.523666666666667 0.222 7.79899807763315 2.63330738032717 -0.523666666666667 0.222 0.165996982021418 0.545342396066793 -1.60027166857135 0.644811006888729 P52701 MSH6 P52701.S219.p_MSH6 P52701_S219sS227s_2_2_219_227 P52701 P52701|P52701-3|P52701-2|A0A087WWJ1 DNA mismatch repair protein Msh6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.13438.13438.3 11.72 8.45 99 2 2 2 0 837.0267 2349.1346 S219s S227s TMT10 219 (K) sEEDNEIEsEEEVQPK (T) S(1.0)EEDNEIES(1.0)EEEVQPK K:TMT10,s:Phosphorylated S MSH6 154608.6 2 17 875.1 209.27 HUMAN 1 -7.799 2.6333 TVAEVDESNGEEKSE-p Q9HAU0-6;S988-p TVAEVDESNGEEKSE 0.490037715809396 0.0328254615123897 0.107 0.283 5.71073572919599 20.0161864304776 0.107 0.283 0.268488956560516 0.00996279873527231 1.23285724177377 3.87879171614143 Q9HAU0 PLEKHA5 Q9HAU0.6.S988.p_PLEKHA5 Q9HAU0-6_S988s_1_1_988_988 Q9HAU0-6 Q9HAU0-6|Q9HAU0-4|Q9HAU0-2|Q9HAU0-8|A0JP02 Isoform 6 of Pleckstrin homology domain-containing family A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19053.19053.3 17.43 17.43 3.484 4 1 1 0 868.0727 2521.2557 S988s N989n TMT10 975 (K) SEPELTTVAEVDEsnGEEK (S) S(0.0)EPELT(0.0)T(0.0)VAEVDES(0.99)N(1.0)GEEK K:TMT10,s:Phosphorylated S,n:Deamidated PLEKHA5 147692.6 3 11 374.1 338.83 HUMAN 1 5.7107 20.0162 TVASEKESVM_____-p Q15758;S539-p TVASEKESVM_____ 0.175358480804402 0.0527997638238564 0.236333333333333 -0.269666666666667 15.0470527440872 17.0395772867023 0.236333333333333 -0.269666666666667 0.031282015407235 0.019771620745227 2.88728062136046 -3.26793657268927 Q15758 SLC1A5 Q15758.S539.p_SLC1A5 Q15758_S539s _1_1_539_539 Q15758 Q15758|M0QXM4|Q15758-2|Q15758-3 Neutral amino acid transporter B(0) HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11090.11090.4 12.39 12.39 4.456 4 1 1 0 636.5654 2463.2702 S539s TMT10 523 (K) HYRGPAGDATVASEKEsVM (-) HY(0.0)RGPAGDAT(0.0)VAS(0.0)EKES(0.99)VM K:TMT10,s:Phosphorylated S SLC1A5 57053.7 3 6 1953.1 105.31 HUMAN 1 15.0471 -17.0396 TVASPAESDEENRQK-p Q01826-2;S669-p TVASPAESDEENRQK 0.845323173757714 0.119686298688817 -0.0356666666666667 -0.215666666666667 1.41042699479035 12.1569114003468 -0.0356666666666667 -0.215666666666667 0.722698744958201 0.0608567646335663 -0.373881340012539 -2.35900237939719 Q01826 SATB1 Q01826.2.S669.p_SATB1 Q01826-2_S669s _1_1_669_669 Q01826-2 Q01826-2 Isoform 2 of DNA-binding protein SATB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9319.10010.5 18.84 18.84 4.809 3 1 1 0 578.3007 2807.5052 S669s TMT10 656 (R) LPPRQPTVASPAEsDEENRQK (T) LPPRQPT(0.0)VAS(0.0)PAES(0.99)DEENRQK K:TMT10,s:Phosphorylated S SATB1 89467.4 16 11 821.1 218.79 HUMAN 1 -1.4104 -12.1569 TVATLQGTPDHGDPR-p Q8IVT2;T164-p TVATLQGTPDHGDPR 0.895351413125903 0.00224652614039878 -0.0203333333333334 -0.92 0.93980879426493 41.051322306257 -0.0203333333333334 -0.92 0.805413900172927 7.84996588529112e-05 -0.258711193415249 -10.6144906132927 Q8IVT2 MISP Q8IVT2.T164.p_MISP Q8IVT2_T164t _1_1_164_164 Q8IVT2 Q8IVT2 Mitotic interactor and substrate of PLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7788.7788.3 12.89 9.97 2.671 5 1 1 0 683.3274 1967.9984 T164t TMT10 155 (K) SSTVATLQGtPDHGDPR (T) S(0.0)S(0.0)T(0.0)VAT(0.0)LQGT(0.99)PDHGDPR t:Phosphorylated T MISP 75526.3 1 2 490.1 294.31 HUMAN 1 -0.9398 -41.0513 TVCVLRRSPDGAPVQ-p Q3KP66-3;S558-p TVCVLRRSPDGAPVQ 0.396505103518709 0.0497641899344221 0.159333333333333 -0.246666666666667 7.41582960334796 17.4245642272228 0.159333333333333 -0.246666666666667 0.181308030233318 0.0180943746080588 1.53362340842052 -3.34410175894809 Q3KP66 C1orf106 Q3KP66.3.S558.p_C1orf106 Q3KP66-3_S558s _1_1_558_558 Q3KP66-3 Q3KP66|Q3KP66-3 Isoform 2 of Innate immunity activator protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25357.25357.3 13.89 13.89 13.889 2 1 1 0 887.802 2581.4187 S558s Hydrogen 557 (R) RsPDGAPVQVFVPEKGEIISQV (-) RS(0.99)PDGAPVQVFVPEKGEIIS(0.0)QV K:TMT10-Lys-Only,s:Phosphorylated S INAVA 64150.1 3 5 2361.1 86.54 HUMAN 1 7.4158 -17.4246 TVDQNSDSDEMLAIL-p P46100;S731-p TVDQNSDSDEMLAIL 0.407878856431238 0.261741524823828 0.111666666666667 0.13 7.18823575718326 7.6691857798443 0.111666666666667 0.13 0.191062925953185 0.171033594073026 1.49392433027032 1.57723666687213 P46100 ATRX P46100.S731.p_ATRX P46100_S729sS731s_2_2_729_731 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.30733.31361.3 15.41 15.07 6.68 4 2 2 0 914.418 2581.3067 S729s S731s TMT10 721 (K) QSETVDQNsDsDEMLAILK (E) Q(0.0)S(0.0)ET(0.0)VDQN(0.0)S(0.99)DS(0.99)DEM(0.0)LAILK K:TMT10,s:Phosphorylated S ATRX 285034.2 16 47 18.1 1035.36 HUMAN 1 7.1882 7.6692 TVDSQGPTPVCTPTF-p Q9BYG3;T234-p TVDSQGPTPVCTPTF 0.957810192524261 0.356103735144675 -0.0103333333333333 -0.105333333333333 0.363487548395664 5.94793762694514 -0.0103333333333334 -0.105333333333333 0.919710712756506 0.254217964654033 -0.105591000648803 -1.27498269456969 Q9BYG3 NIFK Q9BYG3.T234.p_NIFK Q9BYG3_T234t _1_1_234_234 Q9BYG3 Q9BYG3 MKI67 FHA domain-interacting nucleolar phosphoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20492.20492.3 15.64 15.64 1.302 5 1 1 0 772.0366 2234.1324 T234t TMT10 227 (K) TVDSQGPtPVCTPTFLER (R) T(0.0)VDS(0.0)QGPT(0.99)PVCT(0.0)PT(0.0)FLER C:Carbamidomethylation,t:Phosphorylated T NIFK 34392.7 1 4 1531.1 133.75 HUMAN 1 -0.3635 -5.9479 TVDWFRRYKVPDGKP-p Q15181;Y193-p TVDWFRRYKVPDGKP 0.240071422160202 0.0198070948003416 -0.197333333333333 0.357333333333333 11.8440710920889 23.3700308063216 -0.197333333333333 0.357333333333333 0.0654022803296789 0.00460253308800818 -2.3047073330016 4.63714929843216 Q15181 PPA1 Q15181.Y193.p_PPA1 Q15181_Y193y _1_1_193_193 Q15181 Q15181 Inorganic pyrophosphatase GG20160819_MSz_CCLE_T4D7_pY_Injection_01.24420.24475.4 23.03 19.35 99 1 1 1 0 807.4286 3146.7332 Y193y TMT10 193 (R) yKVPDGKPENEFAFNAEFK (D) Y(1.0)KVPDGKPENEFAFNAEFK K:TMT10,y:Phosphorylated Y PPA1 33115.9 2 1 144.1 23.03 HUMAN 1 -11.8441 23.37 TVEDSGESLEDLMAK-p Q9GZZ9;S393-p TVEDSGESLEDLMAK 0.560640811468581 0.792556798018704 0.088 -0.03 4.63224864162445 1.40627064794319 0.088 -0.03 0.344171683238847 0.723390723465238 1.03621302492495 -0.372857116825409 Q9GZZ9 UBA5 Q9GZZ9.S393.p_UBA5 Q9GZZ9_S393s _1_1_393_393 Q9GZZ9 Q9GZZ9|Q9GZZ9-2 Ubiquitin-like modifier-activating enzyme 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25904.25904.4 13.41 13.41 1.157 5 1 1 0 855.9312 3340.7285 S393s TMT10 377 (K) KQEDSVTELTVEDSGEsLEDLMAK (M) KQEDS(0.0)VT(0.0)ELT(0.0)VEDS(0.0)GES(0.99)LEDLMAK K:TMT10,s:Phosphorylated S UBA5 45318.8 4 5 3261.1 55.65 HUMAN 1 4.6322 -1.4063 TVEGQNGSKSNSPPA-p Q9H0F6;S127-p TVEGQNGSKSNSPPA 0.418116670228811 0.49641731294961 0.139 0.0693333333333333 6.98719068931809 4.06816551788716 0.139 0.0693333333333334 0.200115593415936 0.391907385834481 1.45877082372928 0.929977778112438 Q9H0F6 SHARPIN Q9H0F6.S127.p_SHARPIN Q9H0F6_S127s _1_1_127_127 Q9H0F6 Q9H0F6|Q9H0F6-2 Sharpin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5989.5989.2 13.38 13.38 6.057 2 1 1 0 793.4051 1505.8324 S127s TMT10 118 (R) GATVEGQNGsK (S) GAT(0.0)VEGQNGS(0.99)K K:TMT10,s:Phosphorylated S SHARPIN 40519.1 2 1 2786.1 70.66 HUMAN 1 6.9872 4.0682 TVEHFSRSFKETTNR-p Q92613;S715-p TVEHFSRSFKETTNR 0.803019775253289 0.15294293239681 -0.088 -0.172666666666667 1.83563935244455 10.7251794302489 -0.088 -0.172666666666667 0.655293808775476 0.0846217606315529 -0.472087500291263 -2.10710708898896 Q92613 JADE3 Q92613.S715.p_JADE3 Q92613_S715s _1_1_715_715 Q92613 Q92613 Protein Jade-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6674.6674.3 7.92 7.92 7.916 3 1 1 0 507.5993 1440.8211 S715s TMT10 715 (R) sFKETTNR (W) S(0.99)FKET(0.0)T(0.0)NR K:TMT10,s:Phosphorylated S JADE3 95461.1 1 6 1439.1 142.43 HUMAN 1 -1.8356 -10.7252 TVESEHLSELTEEEY-p Q9Y2E8-2;S523-p TVESEHLSELTEEEY 0.832987870919974 0.0235819629746551 0.039 0.362 1.53104702385794 22.1916253046128 0.039 0.362 0.702902839313671 0.00603722649798037 0.402248637739137 4.3612234755506 Q9Y2E8 SLC9A8 Q9Y2E8.2.S523.p_SLC9A8 Q9Y2E8-2_S519sS523sT526t_3_3_519_526 Q9Y2E8-2 Q9Y2E8-2 Isoform 2 of Sodium/hydrogen exchanger 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22324.22324.4 12.39 12.39 1.201 6 3 3 0 834.5928 3095.4465 S519s S523s T526t TMT10 513 (K) MGNTVEsEHLsELtEEEYEAHYIR (R) MGNT(0.0)VES(0.99)EHLS(0.99)ELT(0.99)EEEY(0.0)EAHY(0.0)IR s:Phosphorylated S,t:Phosphorylated T SLC9A8 67673.2 1 2 4249.1 34.7 HUMAN 1 1.531 22.1916 TVFIRNLSFDSEEEE-p Q9NW13;S343-p TVFIRNLSFDSEEEE 0.317740322619387 0.00575422933881225 0.196 0.521 9.3241272816042 32.4229715255818 0.196 0.521 0.116838849491824 0.000572404247077497 1.86448667078973 7.19193129794745 Q9NW13 RBM28 Q9NW13.S343.p_RBM28 Q9NW13_S343s _1_1_343_343 Q9NW13 Q9NW13 RNA-binding protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37467.37467.3 19.01 15.89 1.153 2 1 1 0 1031.5123 3012.5454 S343s TMT10 341 (R) NLsFDSEEEELGELLQQFGELK (Y) NLS(0.99)FDS(0.0)EEEELGELLQQFGELK K:TMT10,s:Phosphorylated S RBM28 86249.5 1 2 3296.1 54.56 HUMAN 1 9.3241 32.423 TVFKSPRTPPQRFYS-p Q14CS0;T59-p TVFKSPRTPPQRFYS 0.0635370415880919 0.00867739174490192 1.22533333333333 -0.741666666666667 25.8829082165408 29.2501861079976 1.22533333333333 -0.741666666666667 0.00258053158061416 0.00118845129770162 5.27092233638775 -6.19769353820272 Q14CS0 UBXN2B Q14CS0.T59.p_UBXN2B Q14CS0_T59t _1_1_59_59 Q14CS0 Q14CS0|E5RJ36|E5RGJ4 UBX domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8903.8903.4 9.57 8.69 2.56 3 1 1 0 506.5382 1943.1591 T59t TMT10 51 (K) ATVFKSPRtPPQR (F) AT(0.0)VFKS(0.0)PRT(0.99)PPQR K:TMT10,t:Phosphorylated T UBXN2B 37190 2 3 2111.1 97.2 HUMAN 1 25.8829 -29.2502 TVFSGSVSIPSITKS-p Q5VT25-2;S1635-p TVFSGSVSIPSITKS 0.360492363525231 0.0788088505716245 -0.142666666666667 -0.201666666666667 8.23850418753152 14.6475359603701 -0.142666666666667 -0.201666666666667 0.150020145123828 0.0342962316545623 -1.67651134306651 -2.81082237672041 Q5VT25 CDC42BPA Q5VT25.2.S1635.p_CDC42BPA Q5VT25-2_S1635s _1_1_1635_1635 Q5VT25-2 Q5VT25-6|Q5VT25-2|Q5VT25-5|A0A0A0MRJ0|Q5VT25-4|Q5VT25-3|A0A0A0MRJ1 Isoform 2 of Serine/threonine-protein kinase MRCK alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27103.27103.3 14.69 14.69 1.217 6 1 1 0 654.3672 1881.1097 S1635s TMT10 1628 (R) TVFSGSVsIPSITK (S) T(0.0)VFS(0.0)GS(0.0)VS(0.99)IPS(0.0)IT(0.0)K K:TMT10,s:Phosphorylated S CDC42BPA 201918 2 10 917.1 200.65 HUMAN 1 -8.2385 -14.6475 TVFTPKTSPENVQDR-p P49792;S1400-p TVFTPKTSPENVQDR 0.558215002061898 0.0173834041086758 -0.0893333333333333 0.404666666666667 4.67647119340689 24.2573865059298 -0.0893333333333334 0.404666666666667 0.340684896606269 0.003751987211267 -1.04442158785958 4.85229805801375 P49792 RANBP2 P49792.S1400.p_RANBP2 P49792_S1400s _1_1_1400_1400 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5175.5175.2 9.69 3.15 1.36 2 1 1 0 677.8144 1274.6538 S1400s TMT10 1399 (K) TsPENVQDR (F) T(0.0)S(0.99)PENVQDR s:Phosphorylated S RANBP2 362585.9 11 23 9.1 1298.62 HUMAN 1 -4.6765 24.2574 TVGLKRGSDELLSSG-p O95758-5;S17-p TVGLKRGSDELLSSG 0.356019622503244 0.0079657699052288 0.131 0.484333333333333 8.33647253874603 29.9251105151672 0.131 0.484333333333334 0.146673868345596 0.00101739347618075 1.69348511473832 6.39926068476083 O95758 PTBP3 O95758.5.S17.p_PTBP3 O95758-5_S17s _1_1_17_17 O95758-5 O95758-5 Isoform 5 of Polypyrimidine tract-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24041.24041.5 27.25 21.07 4.42 11 1 1 0 894.6534 4389.26 S17s TMT10 15 (K) RGsDELLSSGIINGPFTMNSSTPSTGVYANGNDSKK (F) RGS(0.99)DELLS(0.0)S(0.0)GIINGPFT(0.0)MNS(0.0)S(0.0)T(0.0)PS(0.0)T(0.0)GVY(0.0)ANGNDS(0.0)KK K:TMT10,s:Phosphorylated S PTBP3 60293.1 3 5 2265.2 90.69 HUMAN 1 8.3365 29.9251 TVGMNFKTPRGPV__-p P08708;T130-p TVGMNFKTPRGPV__ 0.573608268741354 0.00606823738401418 -0.0813333333333333 -0.503 4.44291868864036 31.9921228614911 -0.0813333333333333 -0.503 0.359507645796533 0.000632102799624932 -1.00090226802245 -7.04972452660013 P08708 RPS17 P08708.T130.p_RPS17 P08708_T130t_1_1_130_130 P08708 P08708 40S ribosomal protein S17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.33551.33551.5 15.92 15.92 2.338 5 1 1 0 661.3547 3221.7757 N116n T130t TMT10 108 (K) LLDFGSLSnLQVTQPTVGMNFKtPR (G) LLDFGS(0.0)LS(0.0)N(0.99)LQVT(0.0)QPT(0.0)VGMN(0.0)FKT(0.99)PR K:TMT10,n:Deamidated,t:Phosphorylated T RPS17 15606.9 4 4 2548.1 78.98 HUMAN 1 -4.4429 -31.9921 TVGQRIGSGSFGTVY-p P15056;S465-p TVGQRIGSGSFGTVY 0.184847781389892 0.00894425492005138 -0.411333333333333 -0.49 14.4197122332201 29.0233554175172 -0.411333333333333 -0.49 0.0361433810721484 0.00125217335515639 -2.77030956905521 -6.13108956717121 P15056 BRAF P15056.S465.p_BRAF P15056_S465s _1_1_465_465 P15056 P15056|P04049-2 Serine/threonine-protein kinase B-raf HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20768.20768.2 14.82 7.78 1.105 4 1 1 0 827.4373 1573.899 S465s TMT10 463 (R) IGsGSFGTVYK (G) IGS(0.99)GS(0.0)FGT(0.0)VY(0.0)K K:TMT10,s:Phosphorylated S BRAF 85177.1 2 24 441.1 311.96 HUMAN 1 -14.4197 -29.0234 TVGQTVKSPDKLRKV-p Q9H079;S61-p TVGQTVKSPDKLRKV 0.0818857556802785 0.00105578872948118 -0.367666666666667 -1.111 23.2238514795595 50.6474805800039 -0.367666666666667 -1.111 0.00476008657978317 8.61493374971718e-06 -4.60754603795704 -16.1378761551356 Q9H079 KATNBL1 Q9H079.S61.p_KATNBL1 Q9H079_S61s _1_1_61_61 Q9H079 Q9H079 KATNB1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8976.8976.3 12.88 7.47 3.198 3 1 1 0 643.0345 1847.1205 S61s TMT10 54 (R) TVGQTVKsPDK (L) T(0.0)VGQT(0.0)VKS(0.99)PDK K:TMT10,s:Phosphorylated S KATNBL1 35222.8 2 1 6246.1 12.88 HUMAN 1 -23.2239 -50.6475 TVHLGLDSDSESELV-p Q9ULU4-19;S734-p TVHLGLDSDSESELV 0.24333175644278 0.0935328660591543 0.169666666666667 0.195333333333333 11.7358365785466 13.6098018125003 0.169666666666667 0.195333333333333 0.0670527111073648 0.0435531748443913 2.28556513524438 2.62003354795139 Q9ULU4 ZMYND8 Q9ULU4.19.S734.p_ZMYND8 Q9ULU4-19_S734sS736s_2_2_734_736 Q9ULU4-19 Q9ULU4-19|Q9ULU4-7|Q9ULU4-11|Q9ULU4-16|Q9ULU4-22|Q9ULU4-12|A0A087WVZ6|Q9ULU4-14|Q9ULU4-18|Q9ULU4-3|Q9ULU4-4 Isoform 19 of Protein kinase C-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.22754.22754.5 23.01 23.01 1.153 7 2 2 0 894.8135 4310.1061 S734s S736s TMT10 719 (K) GKDETDSPTVHLGLDsDsESELVIDLGEDHSGREGR (K) GKDET(0.0)DS(0.0)PT(0.0)VHLGLDS(0.99)DS(0.99)ES(0.0)ELVIDLGEDHS(0.0)GREGR K:TMT10,s:Phosphorylated S ZMYND8 139738.7 8 27 57.1 712.18 HUMAN 1 11.7358 13.6098 TVIDEVRTGTYRQLF-p P68363;T80-p TVIDEVRTGTYRQLF 0.905577128202983 0.896459836193613 -0.0173333333333333 -0.0143333333333333 0.845521843710223 0.666189884667279 -0.0173333333333333 -0.0143333333333333 0.823090929233429 0.857790064284975 -0.234667328639947 -0.18789593700076 P68363 TUBA1B P68363.T80.p_TUBA1B P68363_T80t _1_1_80_80 P68363 F5H5D3|Q71U36|P68363|Q9BQE3|Q71U36-2 Tubulin alpha-1B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27633.28240.3 17.56 17.56 1.164 4 1 1 0 863.7782 2509.35 T80t TMT10 65 (R) AVFVDLEPTVIDEVRtGTYR (Q) AVFVDLEPT(0.0)VIDEVRT(0.99)GT(0.0)Y(0.0)R t:Phosphorylated T TUBA1B 50835.4 2 5 868.1 210.03 HUMAN 1 -0.8455 -0.6662 TVKAGDDTPVGYSVP-p Q9UHF7-2;T422-p TVKAGDDTPVGYSVP 0.471386006905665 0.151457002452035 0.103333333333333 0.158666666666667 6.02789568541456 10.7787006508596 0.103333333333333 0.158666666666667 0.24958037416227 0.0835853056521884 1.28953146555484 2.1164510166485 Q9UHF7 TRPS1 Q9UHF7.2.T422.p_TRPS1 Q9UHF7-2_T422t _1_1_422_422 Q9UHF7-2 Q9UHF7-2|Q9UHF7-3 Isoform 2 of Zinc finger transcription factor Trps1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20233.20233.3 12.1 12.1 1.394 5 1 1 0 871.4549 2532.371 T422t TMT10 418 (K) AGDDtPVGYSVPIKPLDSSR (Q) AGDDT(0.99)PVGY(0.0)S(0.0)VPIKPLDS(0.0)S(0.0)R K:TMT10,t:Phosphorylated T TRPS1 145246 1 14 14.1 1150.14 HUMAN 1 6.0279 10.7787 TVKELRKSQGPLEVA-p Q9P0M6;S251-p TVKELRKSQGPLEVA 0.186029759959013 0.26728368537372 -0.232666666666667 0.147333333333333 14.3588750630382 7.54556767422686 -0.232666666666667 0.147333333333333 0.0366532503913918 0.175971863274055 -2.7590500183491 1.55574982134581 Q9P0M6 H2AFY2 Q9P0M6.S251.p_H2AFY2 Q9P0M6_S251s _1_1_251_251 Q9P0M6 Q9P0M6 Core histone macro-H2A.2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31619.31619.3 26.05 27.52 20.588 4 1 1 0 846.7793 2458.3553 S251s TMT10 251 (K) sQGPLEVAEAAVSQSSGLAAK (F) S(0.99)QGPLEVAEAAVS(0.0)QS(0.0)S(0.0)GLAAK K:TMT10,s:Phosphorylated S H2AFY2 40285.7 2 3 2255.1 91.14 HUMAN 1 -14.3589 7.5456 TVKKETQSPEQVKSE-p Q9NYF8;S496-p TVKKETQSPEQVKSE 0.259441883712572 0.202573358073166 0.239333333333333 -0.237666666666667 11.121256962681 9.12306410400104 0.239333333333333 -0.237666666666667 0.0772456983331481 0.122375249314997 2.17736626000017 -1.82900027674642 Q9NYF8 BCLAF1 Q9NYF8.S496.p_BCLAF1 Q9NYF8_S496s _1_1_496_496 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|A0A1W2PQ43 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8372.8585.2 15.76 11.05 1.148 3 1 1 0 1079.0741 2077.1744 S496s TMT10 493 (K) ETQsPEQVKSEK (L) ET(0.0)QS(0.99)PEQVKS(0.0)EK K:TMT10,s:Phosphorylated S BCLAF1 106234.3 45 26 10.1 1293.04 HUMAN 1 11.1213 -9.1231 TVKKPRPSEGDEDCL-p P78346-2;S251-p TVKKPRPSEGDEDCL 0.0405442291831087 0.013271733212951 -0.692 -0.576666666666667 31.0915994180117 26.1094232169226 -0.692 -0.576666666666667 0.000777750068800479 0.00244938852160261 -6.7712439779607 -5.32332776893246 P78346 RPP30 P78346.2.S251.p_RPP30 P78346-2_S251s _1_1_251_251 P78346-2 P78346-2 Isoform 2 of Ribonuclease P protein subunit p30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9669.9669.3 14.35 10.02 6.566 2 1 1 0 851.7717 2473.3324 S251s TMT10 247 (K) KPRPsEGDEDCLPASK (K) KPRPS(0.99)EGDEDCLPAS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RPP30 35906.1 3 1 6061.1 14.35 HUMAN 1 -31.0916 -26.1094 TVKNQSRSPIKRRSG-p A0A1B0GV05;S599-p TVKNQSRSPIKRRSG 0.319669507135721 0.00640125730550233 0.330333333333333 -0.66 9.27403959169344 31.5550658222618 0.330333333333333 -0.66 0.118194166080755 0.000699026142146495 1.85581138567671 -6.90786417828726 A0A1B0GV05 NotFound A0A1B0GV05.S599.p_NotFound A0A1B0GV05_S599s _1_1_599_599 A0A1B0GV05 A0A1B0GV05|Q684P5 Rap1 GTPase-activating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.4374.4374.3 7.78 7.78 2.242 2 1 1 0 489.9402 1387.8422 S599s TMT10 595 (K) NQSRsPIK (R) NQS(0.0)RS(0.99)PIK K:TMT10,s:Phosphorylated S RAP1GAP2 85693.7 1 2 5441.1 19.27 HUMAN 1 9.274 -31.5551 TVKQKYLSFTPPEKD-p Q13177;S141-p TVKQKYLSFTPPEKD 0.639853815157196 0.28594411963965 -0.0726666666666667 -0.105 3.62284145499132 7.17305074375426 -0.0726666666666667 -0.105 0.434226030498641 0.191732142645722 -0.84431199472115 -1.49084998298422 Q13177 PAK2 Q13177.S141.p_PAK2 Q13177_S141s _1_1_141_141 Q13177 Q13177 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26382.26382.3 16.95 16.95 1.105 5 1 1 0 1035.5492 3024.6649 S141s TMT10 139 (K) YLsFTPPEKDGFPSGTPALNAK (G) Y(0.0)LS(0.99)FT(0.0)PPEKDGFPS(0.0)GT(0.0)PALNAK K:TMT10,s:Phosphorylated S PAK2 58326.8 34 23 272.1 393.22 HUMAN 1 -3.6228 -7.1731 TVKREPPSPQGRSSN-p Q8WXG6;S930-p TVKREPPSPQGRSSN 0.361441008106557 0.20564805916035 0.169333333333333 -0.174 8.21581475500209 9.03793988382224 0.169333333333333 -0.174 0.150805966556443 0.124797536255201 1.67257938054298 -1.81427512349603 Q8WXG6 MADD Q8WXG6.S930.p_MADD Q8WXG6_S930s _1_1_930_930 Q8WXG6 Q8WXG6|Q8WXG6-2|A0A0A0MRB5|Q8WXG6-3|Q8WXG6-7|Q8WXG6-4|Q8WXG6-5|Q8WXG6-8|Q8WXG6-6 MAP kinase-activating death domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.3960.3960.4 12.2 12.2 12.204 3 1 1 0 553.5497 2131.2136 S930s TMT10 920 (K) HSPTVKREPPsPQGR (S) HS(0.0)PT(0.0)VKREPPS(0.99)PQGR K:TMT10,s:Phosphorylated S MADD 184612.2 3 8 546.1 275.73 HUMAN 1 8.2158 -9.0379 TVLARLNSELQQQLK-p Q96D71;S767-p TVLARLNSELQQQLK 0.833124060837715 0.160822297671947 0.0296666666666667 0.148 1.52869119951644 10.437019408338 0.0296666666666667 0.148 0.70328423140898 0.0904269867179523 0.401698654934699 2.05687552343212 Q96D71 REPS1 Q96D71.S767.p_REPS1 Q96D71_S767s _1_1_767_767 Q96D71 Q96D71|Q96D71-3|Q96D71-4|E9PMG1|Q96D71-2|Q8NFH8|Q8NFH8-4|Q8NFH8-2 RalBP1-associated Eps domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20259.20259.3 10.31 7.72 99 1 1 1 0 580.3219 1658.9841 S767s TMT10 765 (R) LNsELQQQLK (D) LNS(1.0)ELQQQLK K:TMT10,s:Phosphorylated S REPS1 86831.7 1 37 226.1 425.21 HUMAN 1 1.5287 10.437 TVLKSFLSQGQVLKL-p P48047;S166-p TVLKSFLSQGQVLKL 0.114116037909053 0.116245679150045 0.349333333333333 0.214666666666667 19.6417706610686 12.3286073976656 0.349333333333333 0.214666666666667 0.0108598276755162 0.0584977632145469 3.80248877996902 2.38952878733276 P48047 ATP5O P48047.S166.p_ATP5O P48047_S166s _1_1_166_166 P48047 P48047 ATP synthase subunit O, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25368.25368.3 11.26 11.26 2.268 2 1 1 0 772.4518 2235.368 S166s TMT10 163 (K) SFLsQGQVLKLEAK (T) S(0.0)FLS(0.99)QGQVLKLEAK K:TMT10,s:Phosphorylated S ATP5O 23391 2 3 4936.1 24.87 HUMAN 1 19.6418 12.3286 TVLRKQDSGEAPFSS-p P53804;S1009-p TVLRKQDSGEAPFSS 0.891449487774523 0.966866615396313 -0.023 0.00600000000000001 0.974676392933245 0.207124194936771 -0.023 0.00600000000000002 0.798973473584198 0.953427294178519 -0.267514148821372 0.061154286059407 P53804 TTC3 P53804.S1009.p_TTC3 P53804_S1009s _1_1_1009_1009 P53804 P53804|P53804-2|P53804-3 E3 ubiquitin-protein ligase TTC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11333.11333.3 12.82 12.82 5.722 4 1 1 0 717.0443 2069.1482 S1009s TMT10 1006 (R) KQDsGEAPFSSTK (V) KQDS(0.99)GEAPFS(0.0)S(0.0)T(0.0)K K:TMT10,s:Phosphorylated S TTC3 233002.8 1 2 2735.1 72.28 HUMAN 1 -0.9747 0.2071 TVLRREISELRTKVQ-p Q9NVF7;S283-p TVLRREISELRTKVQ 0.645966449044028 0.187178585400915 -0.084 0.241333333333333 3.55310533709959 9.57162503750666 -0.084 0.241333333333333 0.441254823961248 0.110366557446532 -0.83067950074581 1.90663916520139 Q9NVF7 FBXO28 Q9NVF7.S283.p_FBXO28 Q9NVF7_S283s _1_1_283_283 Q9NVF7 Q9NVF7 F-box only protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12585.12585.3 8.71 3.57 8.706 2 1 1 0 505.2845 1433.8728 S283s TMT10 281 (R) EIsELRTK (V) EIS(0.99)ELRT(0.0)K K:TMT10,s:Phosphorylated S FBXO28 41433.7 1 2 1206.1 166.81 HUMAN 1 -3.5531 9.5716 TVLSNNLSPFAMDKK-p Q09472;S285-p TVLSNNLSPFAMDKK 0.960058955339148 0.611268501543648 0.0103333333333333 0.0553333333333333 0.342037366780799 2.90422650635201 0.0103333333333333 0.0553333333333334 0.92426448030653 0.512362515693146 0.0995780030861445 0.700795002766991 Q09472 EP300 Q09472.S285.p_EP300 Q09472_S285s _1_1_285_285 Q09472 Q09472 Histone acetyltransferase p300 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26141.26141.3 9.02 9.02 3.935 3 1 1 0 692.3594 1995.0985 S285s TMT10 278 (K) TVLSNNLsPFAMDK (K) T(0.0)VLS(0.0)NNLS(0.99)PFAMDK K:TMT10,s:Phosphorylated S EP300 267066 1 3 591.2 264.37 HUMAN 1 0.342 2.9042 TVLTAAGSIGQASGD-p Q9Y4G6;S646-p TVLTAAGSIGQASGD 0.297363648018023 0.337327470639474 0.157 -0.099 9.90875650791594 6.25260091596283 0.157 -0.099 0.10212318456845 0.236995395536044 1.96586261490727 -1.32911143720144 Q9Y4G6 TLN2 Q9Y4G6.S646.p_TLN2 Q9Y4G6_S646s _1_1_646_646 Q9Y4G6 Q9Y4G6 Talin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.25451.25451.3 17.18 17.18 5.086 4 1 1 0 723.0471 2087.1658 S646s TMT10 638 (R) QTVLTAAGsIGQASGDLLR (Q) QT(0.0)VLT(0.0)AAGS(0.99)IGQAS(0.0)GDLLR s:Phosphorylated S TLN2 273947.6 1 29 267.2 395.2 HUMAN 1 9.9088 -6.2526 TVLYNDDSDNDNFVS-p Q6RI45;S1763-p TVLYNDDSDNDNFVS 0.921627477279005 0.248192961754145 -0.0206666666666667 -0.203 0.694709016827515 7.97299483894322 -0.0206666666666667 -0.203 0.852175606383854 0.159477902884015 -0.195442836806862 -1.62996077436303 Q6RI45 BRWD3 Q6RI45.S1763.p_BRWD3 Q6RI45_S1763s _1_1_1763_1763 Q6RI45 Q6RI45|Q6RI45-2|Q6RI45-4|Q6RI45-3 Bromodomain and WD repeat-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27226.27226.3 25.27 25.27 4.705 7 1 1 0 1070.8154 3130.465 S1763s TMT10 1756 (R) TVLYNDDsDNDNFVSTEDPLNLGTSR (S) T(0.0)VLY(0.0)NDDS(0.99)DNDNFVS(0.0)T(0.0)EDPLNLGT(0.0)S(0.0)R s:Phosphorylated S BRWD3 205362.6 2 6 1905.1 108.09 HUMAN 1 -0.6947 -7.973 TVNIMFGTPQEHRNM-p Q9HCD5;T274-p TVNIMFGTPQEHRNM 0.665544717655066 0.792037142921489 0.0663333333333333 0.034 3.30584209503704 1.41010932319022 0.0663333333333333 0.034 0.467106370676302 0.722751609839756 0.781876243820764 0.37376691165332 Q9HCD5 NCOA5 Q9HCD5.T274.p_NCOA5 Q9HCD5_T274t _1_1_274_274 Q9HCD5 Q9HCD5 Nuclear receptor coactivator 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16612.16612.3 20.56 20.56 9.402 3 1 1 0 695.9854 2005.9785 T274t TMT10 265 (R) SCTVNIMFGtPQEHR (N) S(0.0)CT(0.0)VNIMFGT(0.99)PQEHR C:Carbamidomethylation,t:Phosphorylated T NCOA5 65763.5 7 12 426.1 319.02 HUMAN 1 3.3058 1.4101 TVNPLTPSPLNGALV-p Q14687;S32-p TVNPLTPSPLNGALV 0.33363053220453 0.116971307587921 -0.14 0.17 8.89788995287964 12.289734956115 -0.14 0.17 0.128887560793395 0.0590237100422427 -1.7906871634953 2.38261067499408 Q14687 GSE1 Q14687.S32.p_GSE1 Q14687_S32s_1_1_32_32 Q14687 Q14687 Genetic suppressor element 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29769.29769.4 15.73 15.73 1.447 14 1 1 0 1201.8937 4723.5671 S32s N35n TMT10 22 (R) TTATVNPLTPsPLnGALVPSGSPATSSALSAQAAPSSSFAAALRK (L) T(0.0)T(0.0)AT(0.0)VN(0.0)PLT(0.0)PS(0.99)PLN(0.99)GALVPS(0.0)GS(0.0)PAT(0.0)S(0.0)S(0.0)ALS(0.0)AQAAPS(0.0)S(0.0)S(0.0)FAAALRK K:TMT10,s:Phosphorylated S,n:Deamidated GSE1 136446.7 3 1 221.1 428.09 HUMAN 1 -8.8979 12.2897 TVNQSLLSPLVLEVD-p P05787;S74-p TVNQSLLSPLVLEVD 0.950466896477293 0.880388536577018 -0.0116666666666667 -0.0153333333333333 0.435379967696228 0.778027759881202 -0.0116666666666667 -0.0153333333333333 0.904611289114646 0.835982572686247 -0.12556273402711 -0.217212318162255 P05787 KRT8 P05787.S74.p_KRT8 P05787_S74s_1_1_74_74 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36485.36485.4 35.25 27.86 1.154 6 1 1 0 1063.2961 4154.2117 M60m S74s TMT10 48 (R) GGLGGGYGGASGmGGITAVTVNQSLLsPLVLEVDPNIQAVR (T) GGLGGGY(0.0)GGAS(0.0)GM(1.0)GGIT(0.0)AVT(0.0)VNQS(0.0)LLS(0.99)PLVLEVDPNIQAVR m:Oxidized methionine,s:Phosphorylated S KRT8 53703.3 23 16 69.1 672.47 HUMAN 1 -0.4354 -0.778 TVNSGGSSEPSPTEV-p Q6PIJ6;S737-p TVNSGGSSEPSPTEV 0.492994289859056 0.0264579096715966 0.188666666666667 0.545 5.65714884924336 21.4127632861755 0.188666666666667 0.545 0.271822320141287 0.00722310073018743 1.22323772181357 4.18464591811112 Q6PIJ6 FBXO38 Q6PIJ6.S737.p_FBXO38 Q6PIJ6_S736sS737sS740s_3_3_736_740 Q6PIJ6 Q6PIJ6|Q6PIJ6-2 F-box only protein 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13822.13822.3 10.69 10.69 10.693 7 3 3 0 791.9843 2134.0461 S736s S737s S740s TMT10 730 (R) TVNSGGssEPsPTEVDVSR (Q) T(0.0)VNS(0.0)GGS(0.99)S(0.99)EPS(0.99)PT(0.0)EVDVS(0.0)R s:Phosphorylated S FBXO38 135824.2 1 8 2435.1 83.55 HUMAN 1 5.6571 21.4128 TVNSTRETPPKSKLA-p Q5SSJ5;T51-p TVNSTRETPPKSKLA 0.13578914801134 0.263609356569181 0.268666666666667 -0.111666666666667 17.7825007936029 7.62880529429749 0.268666666666667 -0.111666666666667 0.016662874396032 0.172631272003522 3.41838068676542 -1.57022027064098 Q5SSJ5 HP1BP3 Q5SSJ5.T51.p_HP1BP3 Q5SSJ5_T51t _1_1_51_51 Q5SSJ5 Q5SSJ5|Q5SSJ5-2|Q5SSJ5-5 Heterochromatin protein 1-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5778.5778.3 13.3 7.58 3.492 4 1 1 0 589.9858 1687.9743 T51t TMT10 44 (R) TVNSTREtPPK (S) T(0.0)VNS(0.0)T(0.0)RET(0.99)PPK K:TMT10,t:Phosphorylated T HP1BP3 61491.1 23 2 1424.1 144.01 HUMAN 1 17.7825 -7.6288 TVPCAIMSPGKYRLE-p Q9C0I3;S320-p TVPCAIMSPGKYRLE 0.136368951978396 0.416716028724648 -0.276 -0.121 17.7490589097216 5.05671244288298 -0.276 -0.121 0.0167916784437344 0.312125143992102 -3.41165657396948 -1.11421351382019 Q9C0I3 CCSER1 Q9C0I3.S320.p_CCSER1 Q9C0I3_S320s _1_1_320_320 Q9C0I3 Q9C0I3|Q9C0I3-2|E7EUW0 Serine-rich coiled-coil domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22561.22561.3 16.11 16.11 3.074 6 1 1 0 801.41 2322.2449 S320s TMT10 306 (K) TTTELTGTVPCAIMsPGK (Y) T(0.0)T(0.0)T(0.0)ELT(0.0)GT(0.0)VPCAIMS(0.99)PGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCSER1 100307.3 1 3 1823.1 112.62 HUMAN 1 -17.7491 -5.0567 TVPESIHSFIGDGLV-p P42345;S2481-p TVPESIHSFIGDGLV 0.0949352610946194 0.0244462716506142 -0.316666666666667 -0.410333333333333 21.6910721933761 21.9484012910383 -0.316666666666667 -0.410333333333333 0.00677474231007818 0.00638498484661263 -4.25164066176938 -4.30560069073619 P42345 MTOR P42345.S2481.p_MTOR P42345_S2481s _1_1_2481_2481 P42345 P42345|B1AKP8 Serine/threonine-protein kinase mTOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27298.27298.4 22.32 22.32 4.591 5 1 1 0 845.2122 3297.8662 S2481s TMT10 2471 (K) TGTTVPESIHsFIGDGLVKPEALNK (K) T(0.0)GT(0.0)T(0.0)VPES(0.0)IHS(0.99)FIGDGLVKPEALNK K:TMT10,s:Phosphorylated S MTOR 290940.5 6 7 571.1 269.24 HUMAN 1 -21.6911 -21.9484 TVPILFASTVRRHPD-p Q6P1M0;S82-p TVPILFASTVRRHPD 0.74072493450572 0.858740289582643 0.0523333333333333 0.022 2.47317242077028 0.931665691979284 0.0523333333333333 0.022 0.56582581536538 0.806925482891102 0.611214613650763 0.256623495040188 Q6P1M0 SLC27A4 Q6P1M0.S82.p_SLC27A4 Q6P1M0_S82s _1_1_82_82 Q6P1M0 Q6P1M0 Long-chain fatty acid transport protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27268.27268.2 7.6 7.05 1.103 3 1 1 0 756.9229 1432.8725 S82s TMT10 75 (R) TVPILFAsTVR (R) T(0.0)VPILFAS(0.99)T(0.0)VR s:Phosphorylated S SLC27A4 72975.8 1 1 4407.1 31.91 HUMAN 1 2.4732 0.9317 TVPNDYMTSPARLGS-p Q8IZP0-9;T215-p TVPNDYMTSPARLGS 0.371753296116598 0.0151451151347105 0.128 0.672333333333333 7.96939563943421 25.1741607994446 0.128 0.672333333333333 0.159610124389608 0.00303797307209224 1.62985110509145 5.08162184921531 Q8IZP0 ABI1 Q8IZP0.9.T215.p_ABI1 Q8IZP0-9_T200tT215t_2_2_200_215 Q8IZP0-9 Q8IZP0-3|Q8IZP0-4|Q8IZP0-2|Q8IZP0-7|Q8IZP0-8|B6VEX4|Q8IZP0-12|Q8IZP0-9|Q8IZP0-6|Q8IZP0-5|A0A0A0MRT6|Q8IZP0-10|Q8IZP0-11 Isoform 9 of Abl interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20998.21038.4 13.66 13.66 1.439 7 2 2 0 916.7202 3503.9175 T200t T215t TMT10 195 (R) NTPYKtLEPVKPPTVPNDYMtSPAR (L) NT(0.0)PY(0.0)KT(0.99)LEPVKPPT(0.0)VPNDY(0.0)MT(0.99)S(0.0)PAR K:TMT10,t:Phosphorylated T ABI1 52580.9 5 12 1517.1 134.48 HUMAN 1 7.9694 25.1742 TVPQDAATIPSSAMQ-p Q96GD3;T348-p TVPQDAATIPSSAMQ 0.346276230374682 0.409759757098886 0.170666666666667 0.0786666666666667 8.55764573877031 5.15535793061314 0.170666666666667 0.0786666666666667 0.1393912222213 0.305115455308727 1.73178781873102 1.13221861003145 Q96GD3 SCMH1 Q96GD3.T348.p_SCMH1 Q96GD3_T348t_1_1_348_348 Q96GD3 Q96GD3|Q96GD3-2|Q96GD3-3|Q96GD3-4|Q96GD3-5|Q96GD3-6 Polycomb protein SCMH1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29973.29973.5 12.62 12.62 1.22 14 1 1 0 1047.9241 5138.6318 N324n T348t M354m TMT10 321 (R) TLLnPPPASPTTSTPEPDTSTVPQDAAtIPSSAmQAPTVCIYLNK (N) T(0.0)LLN(0.99)PPPAS(0.0)PT(0.0)T(0.0)S(0.0)T(0.0)PEPDT(0.0)S(0.0)T(0.0)VPQDAAT(0.99)IPS(0.0)S(0.0)AM(1.0)QAPT(0.0)VCIY(0.0)LN(0.0)K C:Carbamidomethylation,K:TMT10,n:Deamidated,t:Phosphorylated T,m:Oxidized methionine SCMH1 74265.6 3 1 5129.1 22.58 HUMAN 1 8.5576 5.1554 TVPSDVDS_______-p Q9H6H4;S257-p TVPSDVDS_______ 0.459431148095366 0.0132031691560471 -0.1 -0.366 6.22772685959594 26.1611387775312 -0.1 -0.366 0.238356672538824 0.00242039430414454 -1.32503158857909 -5.33692951109709 Q9H6H4 REEP4 Q9H6H4.S257.p_REEP4 Q9H6H4_S257s _1_1_257_257 Q9H6H4 Q9H6H4 Receptor expression-enhancing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8883.8883.2 16.52 14.45 16.518 3 1 1 0 743.3838 1405.7939 S257s TMT10 249 (K) KTVPSDVDs (-) KT(0.0)VPS(0.0)DVDS(0.99) K:TMT10,s:Phosphorylated S REEP4 29565.8 7 7 1742.1 118.21 HUMAN 1 -6.2277 -26.1611 TVPSNMMSVNGQAKT-p Q9H3P7;S333-p TVPSNMMSVNGQAKT 0.306684187031916 0.972894230536863 0.164 -0.00366666666666663 9.606529070079 0.168523675366926 0.164 -0.00366666666666663 0.109483101786617 0.961939220879176 1.91342458591133 -0.049965081416733 Q9H3P7 ACBD3 Q9H3P7.S333.p_ACBD3 Q9H3P7_S333s_1_1_333_333 Q9H3P7 Q9H3P7 Golgi resident protein GCP60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20386.20386.3 13.71 13.29 4.111 3 1 1 0 763.0463 2206.1724 S333s N335n TMT10 323 (K) VNATVPSNMMsVnGQAK (T) VN(0.0)AT(0.0)VPS(0.0)N(0.0)MMS(0.99)VN(0.99)GQAK K:TMT10,s:Phosphorylated S,n:Deamidated ACBD3 60877.6 2 3 2173.1 94.52 HUMAN 1 9.6065 -0.1685 TVPTPQQSPKPQEQS-p Q9Y6V0-5;S895-p TVPTPQQSPKPQEQS 0.428134268468745 0.741192823230996 -0.111 -0.0333333333333333 6.78249008756688 1.79377195383364 -0.111 -0.0333333333333333 0.209773677231169 0.661641602160092 -1.42288292147983 -0.46257928184276 Q9Y6V0 PCLO Q9Y6V0.5.S895.p_PCLO Q9Y6V0-5_S895s _1_1_895_895 Q9Y6V0-5 Q9Y6V0-5|Q9Y6V0-6|Q9Y6V0-2 Isoform 5 of Protein piccolo HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8444.8444.5 20.14 14.95 3.346 7 1 1 0 761.4028 3723.0091 S895s TMT10 874 (K) GSPTPPGPRPTAGQTVPTPQQsPKPQEQSRR (F) GS(0.0)PT(0.0)PPGPRPT(0.0)AGQT(0.0)VPT(0.0)PQQS(0.99)PKPQEQS(0.0)RR K:TMT10,s:Phosphorylated S PCLO 562515 4 6 1007.1 189 HUMAN 1 -6.7825 -1.7938 TVQLHPQSPTAGKKH-p O60245-2;S1011-p TVQLHPQSPTAGKKH 0.688287844973563 0.847140377076707 0.0573333333333333 -0.0196666666666667 3.04471927575459 1.01217227822381 0.0573333333333333 -0.0196666666666667 0.496052990801519 0.792105031889774 0.729480742088899 -0.276901616061625 O60245 PCDH7 O60245.2.S1011.p_PCDH7 O60245-2_S1011s _1_1_1011_1011 O60245-2 O60245-2 Isoform B of Protocadherin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15333.15333.4 11.71 11.71 1.912 6 1 1 0 707.6488 2747.6023 S1011s TMT10 998 (K) SSSPLPTVQLHPQsPTAGKK (H) S(0.0)S(0.0)S(0.0)PLPT(0.0)VQLHPQS(0.99)PT(0.0)AGKK K:TMT10,s:Phosphorylated S PCDH7 116997.8 2 1 4508.1 30.5 HUMAN 1 3.0447 -1.0122 TVRATRASPDPRAYV-p O15417;S453-p TVRATRASPDPRAYV 0.998180995519267 0.0346886269213625 0.000666666666666681 0.306 0.0125804555736353 19.6612475730934 0.000666666666666683 0.306 0.997107434605432 0.0108112333852463 0.00379576215371972 3.80314259161917 O15417 TNRC18 O15417.S453.p_TNRC18 O15417_S453s _1_1_453_453 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3616.3616.3 7.73 3.87 4.151 2 1 1 0 427.2168 1199.6694 S453s TMT10 449 (R) ATRAsPDPR (A) AT(0.0)RAS(0.99)PDPR s:Phosphorylated S TNRC18 316168 1 5 75.1 647.68 HUMAN 1 0.0126 19.6612 TVRFQNYSPPPTKHY-p Q8TEC5;S649-p TVRFQNYSPPPTKHY 0.388028089322718 0.237460212046038 0.131333333333333 0.144 7.60581560029702 8.22488543052274 0.131333333333333 0.144 0.173547531189635 0.150491321878807 1.56669553885538 1.67360505410838 Q8TEC5 SH3RF2 Q8TEC5.S649.p_SH3RF2 Q8TEC5_S649s _1_1_649_649 Q8TEC5 Q8TEC5|Q8TEC5-2|Q8TEC5-3 Putative E3 ubiquitin-protein ligase SH3RF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15273.15273.2 10.87 10.87 2.712 3 1 1 0 858.9432 1636.9099 S649s TMT10 645 (R) FQNYsPPPTK (H) FQNY(0.0)S(0.99)PPPT(0.0)K K:TMT10,s:Phosphorylated S SH3RF2 80117 5 2 5073.1 23.31 HUMAN 1 7.6058 8.2249 TVRVWSVTPKKLRSV-p Q15542;T500-p TVRVWSVTPKKLRSV 0.769828161282449 0.020379930359248 -0.043 0.328666666666667 2.17642737305536 23.1474480301279 -0.043 0.328666666666667 0.605839049836685 0.00484456957060321 -0.547528105616661 4.58419390711055 Q15542 TAF5 Q15542.T500.p_TAF5 Q15542_T500t _1_1_500_500 Q15542 Q15542|Q15542-2 Transcription initiation factor TFIID subunit 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16776.16776.3 10.84 8.67 1.105 2 1 1 0 571.343 1632.0452 T500t TMT10 496 (R) VWSVtPKK (L) VWS(0.0)VT(0.99)PKK K:TMT10,t:Phosphorylated T TAF5 87342.2 1 1 6580.1 10.84 HUMAN 1 -2.1764 23.1474 TVSKDRQSFGPIMVY-p Q9H156;S323-p TVSKDRQSFGPIMVY 0.547622121984462 NA -0.3815 0.147 4.82801894079241 NA -0.3815 NA 0.329001672653614 NA -1.09669644135998 NA Q9H156 SLITRK2 Q9H156.S323.p_SLITRK2 Q9H156_T316tS318sS323s_3_3_316_323 Q9H156 Q9H156|Q9H156-2 SLIT and NTRK-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5774.5774.4 10.68 3.31 7.413 6 3 3 0 1035.0105 3880.1769 N309n T316t S318s S323s M328m TMT10 307 (K) MRnRPTPRVtVsKDRQsFGPImVYQTK (S) M(0.0)RN(1.0)RPT(0.0)PRVT(0.99)VS(0.99)KDRQS(0.99)FGPIM(0.99)VY(0.0)QT(0.0)K K:TMT10,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S,m:Oxidized methionine SLITRK2 96543.7 1 1 6600.1 10.68 HUMAN 1 -4.828 NA TVSRASSSRSVRTTR-p P20700;S406-p TVSRASSSRSVRTTR 0.88811537779619 0.011435776983551 -0.0283333333333333 -0.507666666666667 1.00306467344815 27.1752773936071 -0.0283333333333333 -0.507666666666667 0.79376790111869 0.00191633865798658 -0.274646991922035 -5.60884879441801 P20700 LMNB1 P20700.S406.p_LMNB1 P20700_S406s _1_1_406_406 P20700 P20700 Lamin-B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3235.3235.3 7.83 7.83 1.201 5 1 1 0 453.5702 1278.7327 S406s TMT10 398 (R) VTVSRASSsR (S) VT(0.0)VS(0.0)RAS(0.0)S(0.0)S(0.99)R s:Phosphorylated S LMNB1 66692.5 8 14 440.1 312.01 HUMAN 1 -1.0031 -27.1753 TVSRRKGSVDQYLLR-p Q8NCN4;S693-p TVSRRKGSVDQYLLR 0.139286671509888 0.98287178441543 -0.302666666666667 -0.00299999999999998 17.5354103225094 0.109690141472532 -0.302666666666667 -0.00299999999999998 0.0176383910864489 0.975059203333265 -3.36884399856324 -0.0327323456447113 Q8NCN4 RNF169 Q8NCN4.S693.p_RNF169 Q8NCN4_S693s _1_1_693_693 Q8NCN4 Q8NCN4 E3 ubiquitin-protein ligase RNF169 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13706.13706.2 8.05 8.05 8.048 2 1 1 0 744.3953 1407.8157 S693s Hydrogen 691 (R) KGsVDQYLLR (S) KGS(0.99)VDQY(0.0)LLR K:TMT10-Lys-Only,s:Phosphorylated S RNF169 78277 1 14 729.1 236.14 HUMAN 1 -17.5354 -0.1097 TVTGERQSGDGQEST-p O15234;S148-p TVTGERQSGDGQEST 0.266142547410633 0.0886945950726792 0.390666666666667 -0.408666666666667 10.8950163146065 13.9235487788311 0.390666666666667 -0.408666666666667 0.0813763803806685 0.0405177314958092 2.13772703683054 -2.67729719423785 O15234 CASC3 O15234.S148.p_CASC3 O15234_S148s _1_1_148_148 O15234 O15234 Protein CASC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9982.9982.5 23.84 21.99 2.189 6 1 1 0 749.5977 3663.9959 S148s TMT10 140 (K) STVTGERQsGDGQESTEPVENKVGKK (G) S(0.0)T(0.0)VT(0.0)GERQS(0.99)GDGQES(0.0)T(0.0)EPVENKVGKK K:TMT10,s:Phosphorylated S CASC3 76390.7 16 5 323.1 362.08 HUMAN 1 10.895 -13.9235 TVTRSYRSVGGSGGG-p P02545;S628-p TVTRSYRSVGGSGGG 0.973664562114504 0.00817736014367236 -0.00566666666666667 -0.508 0.227379959425637 29.7119292416401 -0.00566666666666667 -0.508 0.948990804111472 0.00106858008452833 -0.0669958247716163 -6.33503925809217 P02545 LMNA P02545.S628.p_LMNA P02545_S628s _1_1_628_628 P02545 P02545|P02545-3|P02545-4|P02545-5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13699.13699.2 12.68 8.18 2.151 6 1 1 0 1141.5406 2202.1101 S628s TMT10 625 (R) SYRsVGGSGGGSFGDNLVTR (S) S(0.0)Y(0.0)RS(0.99)VGGS(0.0)GGGS(0.0)FGDNLVT(0.0)R s:Phosphorylated S LMNA 74423.5 2 35 60.1 706.83 HUMAN 1 -0.2274 -29.7119 TVTSSKISQRDPSPE-p Q8NDX5-7;S270-p TVTSSKISQRDPSPE 0.182003668118224 0.644452350330852 0.239 0.066 14.5640924353574 2.60087717125526 0.239 0.066 0.0349615562696223 0.549429890918383 2.79708911218892 0.638027950075583 Q8NDX5 PHC3 Q8NDX5.7.S270.p_PHC3 Q8NDX5-7_S270s _1_1_270_270 Q8NDX5-7 Q8NDX5-7|Q8NDX5-2|E7EX82|Q8NDX5-3 Isoform 7 of Polyhomeotic-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7838.7838.4 10.98 0.85 1.264 6 1 1 0 799.6709 3115.6951 S270s TMT10 269 (K) IsQRDPSPESNKKGESPSLESR (S) IS(0.99)QRDPS(0.0)PES(0.0)NKKGES(0.0)PS(0.0)LES(0.0)R K:TMT10,s:Phosphorylated S PHC3 108276.8 8 3 439.1 312.22 HUMAN 1 14.5641 2.6009 TVTSSQSTPAKAPRA-p Q9NZJ0;T429-p TVTSSQSTPAKAPRA 0.219124483613102 0.00125830331360344 0.279666666666667 -1.18733333333333 12.6982775858137 47.4817364054818 0.279666666666667 -1.18733333333333 0.0537244825702499 1.78577344034364e-05 2.45683764280147 -14.0686765307807 Q9NZJ0 DTL Q9NZJ0.T429.p_DTL Q9NZJ0_T429t _1_1_429_429 Q9NZJ0 Q9NZJ0|F5GZ90 Denticleless protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11218.11218.3 14.25 14.25 1.136 7 1 1 0 795.0925 2303.2971 T429t TMT10 415 (K) ESRPGLVTVTSSQStPAK (A) ES(0.0)RPGLVT(0.0)VT(0.0)S(0.0)S(0.0)QS(0.0)T(0.99)PAK K:TMT10,t:Phosphorylated T DTL 80892.7 5 3 461.1 305.23 HUMAN 1 12.6983 -47.4817 TVVGENGSVLRRVTR-p Q9NQS7;S119-p TVVGENGSVLRRVTR 0.726935837841591 0.144046573930824 0.0493333333333333 -0.161333333333333 2.62699224975885 11.084230614608 0.0493333333333333 -0.161333333333333 0.546135962116687 0.0779070820593858 0.643575652453339 -2.16988550813336 Q9NQS7 INCENP Q9NQS7.S119.p_INCENP Q9NQS7_S119s _1_1_119_119 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20702.20702.3 12.94 12.94 6.931 2 1 1 0 541.9595 1543.9005 S119s TMT10 110 (K) LATVVGENGsVLR (R) LAT(0.0)VVGENGS(0.99)VLR s:Phosphorylated S INCENP 105826.3 4 3 138.1 524.38 HUMAN 1 2.627 -11.0842 TWAPRNKSEDEDEDE-p Q9BZI1;S186-p TWAPRNKSEDEDEDE 0.816933922745656 0.00554351977683076 0.037 0.51 1.68703625496838 32.7084601448185 0.037 0.51 0.678104106646569 0.000535986665809015 0.438321708155831 7.28747556657209 Q9BZI1 IRX2 Q9BZI1.S186.p_IRX2 Q9BZI1_S186s _1_1_186_186 Q9BZI1 Q9BZI1 Iroquois-class homeodomain protein IRX-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4669.4669.3 11.03 11.03 1.655 2 1 1 0 749.9935 2167.9991 S186s TMT10 184 (R) NKsEDEDEDEGDATR (S) NKS(0.99)EDEDEDEGDAT(0.0)R K:TMT10,s:Phosphorylated S IRX2 49527.6 1 1 2918.1 66 HUMAN 1 1.687 32.7085 TWGARPASPDRFAVS-p O15037;S10-p TWGARPASPDRFAVS 0.703894764314583 0.0737574870125918 0.0656666666666667 0.373666666666667 2.86635905572125 15.029690544716 0.0656666666666667 0.373666666666667 0.516849492805224 0.0314073247789271 0.693135097393157 2.88213623358171 O15037 KHNYN O15037.S10.p_KHNYN O15037_S10s _1_1_10_10 O15037 O15037 Protein KHNYN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14690.14690.3 15.13 15.13 4.109 2 1 1 0 743.0446 2147.1497 S10s TMT10 8 (R) PAsPDRFAVSAEAENK (V) PAS(0.99)PDRFAVS(0.0)AEAENK K:TMT10,s:Phosphorylated S KHNYN 75274.3 1 1 5049.1 23.52 HUMAN 1 2.8664 15.0297 TWKFLSHSTDSLNKI-p Q12802-2;S1933-p TWKFLSHSTDSLNKI 0.863601860466773 0.814922984807344 0.033 -0.0286666666666666 1.24104748615778 1.24402283782565 0.033 -0.0286666666666666 0.751441629997924 0.750926993616223 0.333295657358889 -0.333982466977281 Q12802 AKAP13 Q12802.2.S1933.p_AKAP13 Q12802-2_S1933s _1_1_1933_1933 Q12802-2 Q12802-2|Q12802-4|A8MYJ1|A0A087WTD7 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15002.15002.2 11.01 5.23 1.198 4 1 1 0 893.9622 1706.9478 S1933s TMT10 1929 (K) FLSHsTDSLNK (I) FLS(0.0)HS(0.99)T(0.0)DS(0.0)LNK K:TMT10,s:Phosphorylated S AKAP13 310921 3 17 66.1 683.25 HUMAN 1 1.241 -1.244 TWKKDTGSPPASEGP-p Q969R8;S220-p TWKKDTGSPPASEGP 0.313089580774833 0.101908951573055 0.16 0.184 9.4369003897505 13.1016704568658 0.16 0.184 0.113843951346782 0.0489590468583523 1.88402368168174 2.5280036296306 Q969R8 ITFG2 Q969R8.S220.p_ITFG2 Q969R8_S220s _1_1_220_220 Q969R8 Q969R8 KICSTOR complex protein ITFG2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5347.5347.3 16.03 7.14 2.127 5 1 1 0 733.0234 2117.0875 S220s TMT10 216 (K) KDTGsPPASEGPTDGSR (E) KDT(0.0)GS(0.99)PPAS(0.0)EGPT(0.0)DGS(0.0)R K:TMT10,s:Phosphorylated S ITFG2 50110.8 3 2 2867.1 67.83 HUMAN 1 9.4369 13.1017 TWKTEPVSGEENSPD-p Q86T82;S457-p TWKTEPVSGEENSPD 0.488623016161895 0.00680905337504881 -0.0936666666666667 -0.759 5.72857217374827 31.0942315125651 -0.0936666666666667 -0.759 0.267388535517023 0.000777278846716837 -1.2360561563453 -6.76084467297132 Q86T82 USP37 Q86T82.S457.p_USP37 Q86T82_S457s _1_1_457_457 Q86T82 Q86T82|Q86T82-2 Ubiquitin carboxyl-terminal hydrolase 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14503.14503.3 14.34 14.34 1.131 6 1 1 0 914.7853 2662.3724 S457s TMT10 450 (K) TWKTEPVsGEENSPDISATR (A) T(0.0)WKT(0.0)EPVS(0.99)GEENS(0.0)PDIS(0.0)AT(0.0)R K:TMT10,s:Phosphorylated S USP37 111080.6 1 1 1897.1 108.46 HUMAN 1 -5.7286 -31.0942 TWPRGPSTPNVKNSN-p Q9Y4E8-3;T230-p TWPRGPSTPNVKNSN 0.283283360364086 0.0110487913609338 -0.184666666666667 -0.682 10.3456488609473 27.4060398881707 -0.184666666666667 -0.682 0.0923496202465066 0.00181717189472764 -2.04183070163451 -5.6721336600157 Q9Y4E8 USP15 Q9Y4E8.3.T230.p_USP15 Q9Y4E8-3_T230t _1_1_230_230 Q9Y4E8-3 Q9Y4E8-3|Q9Y4E8-2 Isoform 3 of Ubiquitin carboxyl-terminal hydrolase 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12475.12475.4 12.65 12.65 1.445 3 1 1 0 574.0414 2213.1715 T230t TMT10 219 (K) NEDGTWPRGPStPNVK (N) NEDGT(0.0)WPRGPS(0.0)T(0.99)PNVK K:TMT10,t:Phosphorylated T USP15 111049.4 5 12 1214.2 165.83 HUMAN 1 -10.3456 -27.406 TWSRGRRSPRAPGEP-p J3KQR7;S786-p TWSRGRRSPRAPGEP 0.90589982888838 0.230329861457357 -0.023 -0.274666666666667 0.842656809124283 8.39897720000048 -0.023 -0.274666666666667 0.823634100306128 0.144578022404649 -0.233931115558995 -1.70374310368334 J3KQR7 NotFound J3KQR7.S786.p_NotFound J3KQR7_S786s _1_1_786_786 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18158.18158.5 25.85 19.6 2.09 4 1 1 0 673.7426 3284.7086 S786s TMT10 783 (R) GRRsPRAPGEPTPASFFIGDQNGDAVLSR (K) GRRS(0.99)PRAPGEPT(0.0)PAS(0.0)FFIGDQNGDAVLS(0.0)R s:Phosphorylated S CEP170B 172326.6 5 17 51.1 746.11 HUMAN 1 -0.8427 -8.399 TWTPRNRSEDEEEEE-p P78411;S185-p TWTPRNRSEDEEEEE 0.040574712338576 0.0359648549186556 -0.695666666666667 0.754666666666667 31.0789249026443 19.4364396845364 -0.695666666666667 0.754666666666667 0.000780023181608776 0.0113856028701242 -6.76722472773859 3.75564588901827 P78411 IRX5 P78411.S185.p_IRX5 P78411_S185s _1_1_185_185 P78411 P78411|P78411-2|P78411-3 Iroquois-class homeodomain protein IRX-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.12613.12613.4 17.71 16.13 99 1 1 1 0 629.7925 2436.1778 S185s TMT10 183 (R) NRsEDEEEEENIDLEK (N) NRS(1.0)EDEEEEENIDLEK K:TMT10,s:Phosphorylated S IRX5 50702.2 3 1 1529.1 133.88 HUMAN 1 -31.0789 19.4364 TYADLGKSARDVFTK-p P21796;S13-p TYADLGKSARDVFTK 0.14422887734192 0.322601484809878 -0.324 0.201 17.1658771396705 6.49639020808109 -0.324 0.201 0.0192049104316804 0.224058270422908 -3.2953774539615 1.37218563476428 P21796 VDAC1 P21796.S13.p_VDAC1 P21796_S13s _1_1_13_13 P21796 P21796 Voltage-dependent anion-selective channel protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12339.12339.3 10.09 10.09 10.087 2 1 1 0 487.9333 1381.8204 S13s TMT10 13 (K) sARDVFTK (G) S(0.99)ARDVFT(0.0)K K:TMT10,s:Phosphorylated S VDAC1 30886.1 2 1 1468.1 139.85 HUMAN 1 -17.1659 6.4964 TYDAHDGSPLSPTSA-p Q96AC1-3;S199-p TYDAHDGSPLSPTSA 0.100070223325186 0.00658370813716136 -0.319 -0.746 21.1472412961222 31.3559123950326 -0.317510601474869 -0.746 0.00767849083770153 0.000731827559796828 -4.12960163444119 -6.84400949113247 Q96AC1 FERMT2 Q96AC1.3.S199.p_FERMT2 Q96AC1-3_S199s _1_1_199_199 Q96AC1-3 Q96AC1-3|Q96AC1-2 Isoform 3 of Fermitin family homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.36574.36574.5 29.14 29.14 1.254 13 1 1 0 1093.9458 5385.7241 S199s TMT10 188 (K) TMTPTYDAHDGsPLSPTSAWFGDSALSEGNPGILAVSQPITSPEILAK (M) T(0.0)MT(0.0)PT(0.0)Y(0.0)DAHDGS(0.99)PLS(0.0)PT(0.0)S(0.0)AWFGDS(0.0)ALS(0.0)EGNPGILAVS(0.0)QPIT(0.0)S(0.0)PEILAK K:TMT10,s:Phosphorylated S FERMT2 79301.6 7 3 1095.1 178.25 HUMAN 1 -21.1472 -31.3559 TYEKALGYFHRAEQV-p Q96DB5;Y247-p TYEKALGYFHRAEQV 0.378045476353578 0.0156117994856739 0.149 0.844333333333333 7.80776200555907 24.9739232041946 0.149 0.844333333333333 0.165662343020075 0.00318132237206492 1.60179378121924 5.03090468936977 Q96DB5 RMDN1 Q96DB5.Y247.p_RMDN1 Q96DB5_Y247y _1_1_247_247 Q96DB5 Q96DB5|Q96DB5-2|Q96DB5-3|E5RH53 Regulator of microtubule dynamics protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.12060.12060.2 11.34 3.23 99 1 1 1 0 586.7938 1092.6152 Y247y TMT10 244 (K) ALGyFHR (A) ALGY(1.0)FHR y:Phosphorylated Y RMDN1 36035.6 2 1 313.1 11.34 HUMAN 1 7.8078 24.9739 TYFRGYESPTLSKDY-p Q68DQ2;S1934-p TYFRGYESPTLSKDY 0.799189535927618 0.0575073175770347 -0.044 -0.286666666666667 1.87571327456305 16.5242280794827 -0.044 -0.286666666666667 0.649274987493792 0.0222626670909595 -0.48109847737721 -3.16717660091891 Q68DQ2 CRYBG3 Q68DQ2.S1934.p_CRYBG3 Q68DQ2_S1934s _1_1_1934_1934 Q68DQ2 Q68DQ2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12181.12181.3 9.04 9.04 1.104 4 1 1 0 507.2654 1439.8146 S1934s TMT10 1931 (R) GYEsPTLSK (D) GY(0.0)ES(0.99)PT(0.0)LS(0.0)K K:TMT10,s:Phosphorylated S CRYBG3 333308.2 5 13 582.1 265.87 HUMAN 1 -1.8757 -16.5242 TYGGDTGSPEISFTK-p O94915;S2272-p TYGGDTGSPEISFTK 0.218975268990091 0.0102419910846509 -0.240333333333333 -0.416666666666667 12.7086982664911 27.9369171513639 -0.240333333333333 -0.416666666666667 0.0535957278711598 0.00160808234864293 -2.45870601234658 -5.81977015439223 O94915 FRYL O94915.S2272.p_FRYL O94915_S2272s _1_1_2272_2272 O94915 O94915 Protein furry homolog-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19329.19329.2 16.46 16.46 1.614 6 1 1 0 1049.5127 2018.0483 S2272s TMT10 2265 (K) TYGGDTGsPEISFTK (I) T(0.0)Y(0.0)GGDT(0.0)GS(0.99)PEIS(0.0)FT(0.0)K K:TMT10,s:Phosphorylated S FRYL 342387.4 2 12 526.1 282.44 HUMAN 1 -12.7087 -27.9369 TYHVRRHTGEKPYVC-p Q9NPC7;T438-p TYHVRRHTGEKPYVC 0.94478758147709 0.00637911671662091 -0.0186666666666667 -0.952666666666667 0.487670028008795 31.5909302193056 -0.0186666666666667 -0.952666666666667 0.893784867024662 0.000693277296416991 -0.139918609274042 -6.91941540191108 Q9NPC7 MYNN Q9NPC7.T438.p_MYNN Q9NPC7_T438t _1_1_438_438 Q9NPC7 Q9NPC7|Q9NPC7-2|Q9NPC7-3 Myoneurin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7004.7004.4 17.79 17.79 6.356 3 1 1 0 644.5738 2495.3102 T438t TMT10 436 (R) RHtGEKPYVCDTCGK (A) RHT(0.99)GEKPY(0.0)VCDT(0.0)CGK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T MYNN 70049.9 1 37 394.3 330.8 HUMAN 1 -0.4877 -31.5909 TYITDPVSAPCAPPL-p Q93052;S361-p TYITDPVSAPCAPPL 0.411895318643251 0.468154468214263 0.137333333333333 0.0743333333333333 7.10701194924459 4.39388339538951 0.137333333333333 0.0743333333333334 0.194669899681676 0.363589774265037 1.47973239599535 0.991530623345833 Q93052 LPP Q93052.S361.p_LPP Q93052_S361s _1_1_361_361 Q93052 Q93052|A0A087WZF1|C9JUT4 Lipoma-preferred partner HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.23661.23661.3 14.93 14.57 1.818 4 1 1 0 831.7691 2413.3201 S361s TMT10 354 (K) TYITDPVsAPCAPPLQPK (G) T(0.0)Y(0.0)IT(0.0)DPVS(0.99)APCAPPLQPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LPP 67171.5 1 5 1149.1 172.4 HUMAN 1 7.107 4.3939 TYLERHMSEFMECNL-p P25786-2;S183-p TYLERHMSEFMECNL 0.988219093268103 0.0345251090742119 -0.00266666666666667 0.293 0.106023350701735 19.693963288314 -0.00266666666666666 0.293 0.97588280298929 0.010730097572359 -0.0316539066132719 3.81008143068349 P25786 PSMA1 P25786.2.S183.p_PSMA1 P25786-2_S183s _1_1_183_183 P25786-2 P25786-2|F5GX11 Isoform Long of Proteasome subunit alpha type-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27183.27183.3 24.43 21.09 99 1 1 1 0 807.0465 2339.1598 S183s TMT10 181 (R) HMsEFMECNLNELVK (H) HMS(1.0)EFMECNLNELVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PSMA1 30524.2 4 4 3397.1 52.07 HUMAN 1 -0.106 19.694 TYLPAGQSVLLQLPQ-p P35232;S265-p TYLPAGQSVLLQLPQ 0.299702423811655 0.876754986878946 -0.177666666666667 -0.0506666666666667 9.83767588513948 0.802882440068038 -0.177666666666667 -0.0506666666666667 0.103808379486028 0.831211907361413 -1.9535225309863 -0.223653957598533 P35232 PHB P35232.S265.p_PHB P35232_S265s _1_1_265_265 P35232 P35232 Prohibitin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.35772.35772.3 15.34 13.89 6.598 3 1 1 0 722.0582 2084.1953 S265s TMT10 256 (R) NITYLPAGQsVLLQLPQ (-) NIT(0.0)Y(0.0)LPAGQS(0.99)VLLQLPQ s:Phosphorylated S PHB 29860.6 1 2 4601.1 28.96 HUMAN 1 -9.8377 -0.8029 TYNEAMDSPDQ____-p Q7Z417;S692-p TYNEAMDSPDQ____ 0.765558535333686 0.365281476321607 0.0516666666666667 -0.105333333333333 2.2279228993178 5.7973571899309 0.0482697928374193 -0.105333333333333 0.598697865889701 0.263186907468308 0.558705801630852 -1.24809146090026 Q7Z417 NUFIP2 Q7Z417.S692.p_NUFIP2 Q7Z417_S692s _1_1_692_692 Q7Z417 Q7Z417|Q7Z417-2 Nuclear fragile X mental retardation-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14977.14977.2 18.51 18.51 18.508 3 1 1 0 981.4464 1881.9214 S692s TMT10 682 (K) RIITYNEAMDsPDQ (-) RIIT(0.0)Y(0.0)NEAMDS(0.99)PDQ s:Phosphorylated S NUFIP2 76176.8 5 20 304.1 375.48 HUMAN 1 2.2279 -5.7974 TYNEDVLSKDAGECA-p Q8NHG8;S193-p TYNEDVLSKDAGECA 0.328186833017654 0.0258549518202345 -0.213333333333333 0.291 9.04721755382852 21.5877163607897 -0.213333333333333 0.291 0.124531220524153 0.00693790524158718 -1.81653690535258 4.22392282042999 Q8NHG8 ZNRF2 Q8NHG8.S193.p_ZNRF2 Q8NHG8_S193s _1_1_193_193 Q8NHG8 Q8NHG8 E3 ubiquitin-protein ligase ZNRF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19479.19479.3 14.56 8.79 14.558 3 1 1 0 573.9714 1639.9307 S193s TMT10 185 (R) ITYNEDVLsK (D) IT(0.0)Y(0.0)NEDVLS(0.99)K K:TMT10,s:Phosphorylated S ZNRF2 24627.8 2 6 1463.1 140.17 HUMAN 1 -9.0472 21.5877 TYNGPPASPSLSHEA-p J3KNR0;S606-p TYNGPPASPSLSHEA 0.134150744259901 0.276142008854853 0.328 -0.156666666666667 17.9601221966835 7.36341574544694 0.328 -0.156666666666667 0.015995130227616 0.183509446564252 3.45419929868769 -1.52404594811563 J3KNR0 NotFound J3KNR0.S606.p_NotFound J3KNR0_S606s _1_1_606_606 J3KNR0 J3KNR0|P27448-7|A0A0A0MT23|P27448-8|A0A0A0MST9 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14223.14223.3 22.17 22.17 1.324 9 1 1 0 931.4546 2712.379 S606s TMT10 597 (R) TATYNGPPAsPSLSHEATPLSQTR (S) T(0.0)AT(0.0)Y(0.0)NGPPAS(0.99)PS(0.0)LS(0.0)HEAT(0.0)PLS(0.0)QT(0.0)R s:Phosphorylated S MARK3 87513.5 3 41 200.3 451.67 HUMAN 1 17.9601 -7.3634 TYQTALLSGSDEE__-p Q96B21;S270-p TYQTALLSGSDEE__ 0.830607885532595 0.0231316373105155 -0.102666666666667 0.356333333333333 1.55226273901236 22.3326909032138 -0.102666666666667 0.356333333333333 0.699477462858216 0.00584427858471595 -0.407194474465327 4.39368764481114 Q96B21 TMEM45B Q96B21.S270.p_TMEM45B Q96B21_S270sS272s_2_2_270_272 Q96B21 Q96B21 Transmembrane protein 45B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24408.24408.2 9.67 9.67 5.954 6 2 2 0 1173.978 2187.0138 S270s S272s TMT10 258 (K) LNSDDTYQTALLsGsDEE (-) LNS(0.0)DDT(0.0)Y(0.0)QT(0.0)ALLS(0.99)GS(0.99)DEE s:Phosphorylated S TMEM45B 32110.8 2 2 6131.1 13.74 HUMAN 1 -1.5523 22.3327 TYQVTPMTPRSANAF-p Q15398;T329-p TYQVTPMTPRSANAF 0.995103621521408 0.0233997153972448 -0.00100000000000001 -0.56 0.0429058643701753 22.2463179688773 -0.001 -0.56 0.990169200986019 0.00596167371351004 -0.0129008302082434 -4.37379230602605 Q15398 DLGAP5 Q15398.T329.p_DLGAP5 Q15398_T329t _1_1_329_329 Q15398 Q15398|Q15398-3|Q15398-1 Disks large-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12494.12494.3 12.05 12.05 2.011 4 1 1 0 501.5817 1422.7613 T329t TMT10 322 (K) TYQVTPMtPR (S) T(0.0)Y(0.0)QVT(0.0)PMT(0.99)PR t:Phosphorylated T DLGAP5 95797.9 2 2 355.1 348.78 HUMAN 1 -0.0429 -22.2463 TYRCEERSPSFGEDY-p P49761;S224-p TYRCEERSPSFGEDY 0.790053523868569 0.384086367915671 -0.0406666666666667 0.0873333333333333 1.97440725729888 5.52351502080841 -0.0406666666666667 0.0873333333333334 0.634686519657283 0.280316394112827 -0.503126855356667 1.19892454530509 P49761 CLK3 P49761.S224.p_CLK3 P49761_S224sS226s_2_2_224_226 P49761 P49761|P49761-1|P49761-3|P49761-2 Dual specificity protein kinase CLK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12717.12717.4 12.67 12.67 3.397 8 2 2 0 791.316 3002.306 S224s S226s TMT10 214 (R) DSDTYRCEERsPsFGEDYYGPSR (S) DS(0.0)DT(0.0)Y(0.0)RCEERS(0.99)PS(0.99)FGEDY(0.0)Y(0.0)GPS(0.0)R C:Carbamidomethylation,s:Phosphorylated S CLK3 74312.5 2 6 2160.1 95.02 HUMAN 1 -1.9744 5.5235 TYRCRMCSLTFYSKS-p Q8TF68;S234-p TYRCRMCSLTFYSKS 0.0205436948340693 0.00526062627901912 -0.863333333333333 -0.568 39.3457245173644 33.131623759649 -0.863333333333333 -0.568 0.000116259258381883 0.000486225379581222 -9.8632399701496 -7.43105909615898 Q8TF68 ZNF384 Q8TF68.S234.p_ZNF384 Q8TF68_S234s _1_1_234_234 Q8TF68 Q8TF68|Q8TF68-2|Q8TF68-3 Zinc finger protein 384 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22297.22297.2 11.49 11.49 2.219 4 1 1 0 837.9052 1594.8373 S234s TMT10 232 (R) MCsLTFYSK (S) MCS(0.99)LT(0.0)FY(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF384 64359 1 1 6473.1 11.49 HUMAN 1 -39.3457 -33.1316 TYRDYGHSSSRDDYP-p P38159;S249-p TYRDYGHSSSRDDYP 0.244944374892467 0.133542636081177 0.223 0.194333333333333 11.6820732353308 11.526820469433 0.223 0.194333333333333 0.0678879471715092 0.0703587237416333 2.27606687536536 2.24760590033393 P38159 RBMX P38159.S249.p_RBMX P38159_S249s _1_1_249_249 P38159 P38159|Q96E39|P38159-2|H3BT71|H3BUY5 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.3263.3263.3 12.8 12.8 1.214 6 1 1 0 574.5566 1641.6888 S249s Hydrogen 245 (R) DYGHsSSRDDYPSR (G) DY(0.0)GHS(0.99)S(0.0)S(0.0)RDDY(0.0)PS(0.0)R s:Phosphorylated S RBMX 42331.1 3 20 102.1 595.29 HUMAN 1 11.6821 11.5268 TYRIGHHSTSDDSSA-p P12694;S337-p TYRIGHHSTSDDSSA 0.197586040353389 0.0068542677190344 0.545 0.672 13.7294909540234 31.0481069807607 0.545 0.672 0.04236926250702 0.000785577980699186 2.64338551012606 6.74627202491303 P12694 BCKDHA P12694.S337.p_BCKDHA P12694_S337s _1_1_337_337 P12694 F5H5P2|P12694-2 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4281.4281.3 11.08 11.08 1.185 6 1 1 0 614.6058 1761.8354 S337s TMT10 333 (R) IGHHsTSDDSSAYR (S) IGHHS(0.99)T(0.0)S(0.0)DDS(0.0)S(0.0)AY(0.0)R s:Phosphorylated S BCKDHA 50755.3 1 2 2643.1 75.38 HUMAN 1 13.7295 31.0481 TYRKRIDSFVKRQIE-p Q96CC6;S390-p TYRKRIDSFVKRQIE 0.0219445476003805 0.00246432253845191 -0.894 -1.06033333333333 38.3814505587559 39.952666321303 -0.894 -1.06033333333333 0.000145162668821832 0.000101095859257091 -9.4473425819114 -10.1100914876232 Q96CC6 RHBDF1 Q96CC6.S390.p_RHBDF1 Q96CC6_S390s _1_1_390_390 Q96CC6 Q96CC6 Inactive rhomboid protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13570.13570.4 9 9 99 1 1 1 0 440.7672 1680.0775 S390s TMT10 386 (R) KRIDsFVK (R) KRIDS(1.0)FVK K:TMT10,s:Phosphorylated S RHBDF1 98996.6 12 7 1411.1 145.35 HUMAN 1 -38.3815 -39.9527 TYRTSPDTLRRVFEK-p Q01130-2;T29-p TYRTSPDTLRRVFEK 0.166553758928775 0.315065308962509 0.386 0.107 15.5723428693147 6.62960186040601 0.386 0.107 0.0277182439734662 0.217290037043851 2.98649969748065 1.39564277275441 Q01130 SRSF2 Q01130.2.T29.p_SRSF2 Q01130-2_T29t _1_1_29_29 Q01130-2 Q01130|Q01130-2 Isoform 2 of Serine/arginine-rich splicing factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19954.19954.4 11.55 11.55 11.552 9 1 1 0 968.9825 3792.954 T29t Acetyl 2 (M) SYGRPPPDVEGMTSLKVDNLTYRTSPDtLRR (V) S(0.0)Y(0.0)GRPPPDVEGMT(0.0)S(0.0)LKVDNLT(0.0)Y(0.0)RT(0.0)S(0.0)PDT(0.99)LRR K:TMT10,t:Phosphorylated T SRSF2 24152.5 3 3 1329.1 153.29 HUMAN 1 15.5723 6.6296 TYRYHGHSMSDPGVS-p P08559-4;S331-p TYRYHGHSMSDPGVS 0.0636603099033149 0.0146711725905702 0.396666666666667 0.651 25.8354441502086 25.3922613532866 0.396666666666667 0.651 0.00260888889995946 0.00288917510918382 5.25852886737492 5.13727200800392 P08559 PDHA1 P08559.4.S331.p_PDHA1 P08559-4_S331sS338s_2_2_331_338 P08559-4 P08559-4|P08559-2|P29803|P08559-3|Q5JPU3 Isoform 4 of Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5460.5460.4 12.48 12.48 1.347 5 2 2 0 500.2007 1821.854 S331s M332m S338s TMT10 327 (R) YHGHsmSDPGVsYR (T) Y(0.0)HGHS(0.99)M(1.0)S(0.0)DPGVS(0.99)Y(0.0)R s:Phosphorylated S,m:Oxidized methionine PDHA1 48320.5 44 6 1899.1 108.34 HUMAN 1 25.8354 25.3923 TYSSRDVSLGDWEFG-p Q9C0C2;S882-p TYSSRDVSLGDWEFG 0.703545989174049 0.988816554047082 -0.158 0.00366666666666665 2.8699884300383 0.0740381921807778 -0.158 0.00366666666666671 0.516417745049526 0.983096569819168 -0.693879467536224 0.0221815550607736 Q9C0C2 TNKS1BP1 Q9C0C2.S882.p_TNKS1BP1 Q9C0C2_S882s _1_1_882_882 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21478.21478.3 10.19 10.19 99 1 1 1 0 573.277 1637.8485 S882s Hydrogen 880 (R) DVsLGDWEFGKR (D) DVS(1.0)LGDWEFGKR K:TMT10-Lys-Only,s:Phosphorylated S TNKS1BP1 182819.3 5 33 4.1 2105.7 HUMAN 1 -2.87 0.074 TYVRYKPSPERYTAA-p O60292;S1175-p TYVRYKPSPERYTAA 0.0906315365820643 0.00532559373117816 -0.591333333333333 -0.815666666666667 22.1716055482696 33.0155363338493 -0.591333333333333 -0.815666666666667 0.00606512065993049 0.000499397503089213 -4.36128180467519 -7.39143389197953 O60292 SIPA1L3 O60292.S1175.p_SIPA1L3 O60292_S1175s _1_1_1175_1175 O60292 O60292 Signal-induced proliferation-associated 1-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6204.6204.2 9.84 5.6 9.841 2 1 1 0 707.8784 1334.7833 S1175s TMT10 1172 (R) YKPsPER (Y) Y(0.0)KPS(0.99)PER K:TMT10,s:Phosphorylated S SIPA1L3 195918.6 2 15 144.1 520.25 HUMAN 1 -22.1716 -33.0155 VAAAAADSPNKHVSV-p Q9NWL6;S396-p VAAAAADSPNKHVSV 0.233397292175924 0.00293914781681566 -0.253333333333333 -0.655 12.1369836773072 38.1874248758063 -0.253333333333333 -0.655 0.061136649228006 0.000151795016050116 -2.3566554632423 -9.34523436976422 Q9NWL6 ASNSD1 Q9NWL6.S396.p_ASNSD1 Q9NWL6_S396s _1_1_396_396 Q9NWL6 Q9NWL6 Asparagine synthetase domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9575.9575.3 11.2 11.2 99 1 1 1 0 556.6193 1587.8743 S396s TMT10 388 (K) DVAAAAADsPNK (H) DVAAAAADS(1.0)PNK K:TMT10,s:Phosphorylated S ASNSD1 72877.3 1 1 4800.1 26.46 HUMAN 1 -12.137 -38.1874 VAAERAESCGSGNST-p Q9H2U1;S283-p VAAERAESCGSGNST 0.532081809207476 0.482282159723259 0.158666666666667 -0.138 5.07045236974534 4.22703058888368 0.158666666666667 -0.138 0.311139223144119 0.377830437457216 1.11695334505028 -0.960116008159026 Q9H2U1 DHX36 Q9H2U1.S283.p_DHX36 Q9H2U1_S283s _1_1_283_283 Q9H2U1 Q9H2U1|Q9H2U1-2|Q9H2U1-3 ATP-dependent RNA helicase DHX36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8334.8334.3 17 17 3.243 5 1 1 0 808.0385 2342.1356 S283s TMT10 276 (R) VAAERAEsCGSGNSTGYQIR (L) VAAERAES(0.99)CGS(0.0)GNS(0.0)T(0.0)GY(0.0)QIR C:Carbamidomethylation,s:Phosphorylated S DHX36 115670.9 1 1 5703.1 17 HUMAN 1 5.0705 -4.227 VAAERRASEEEENKA-p Q8IYW5;S134-p VAAERRASEEEENKA 0.571821851409355 0.33017945564727 0.134666666666667 -0.191 4.47090612259592 6.37219576175105 0.134666666666667 -0.191 0.357198303651682 0.230558120866684 1.0061396278743 -1.3502668308814 Q8IYW5 RNF168 Q8IYW5.S134.p_RNF168 Q8IYW5_S134s _1_1_134_134 Q8IYW5 Q8IYW5 E3 ubiquitin-protein ligase RNF168 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6616.6616.3 19.01 12.49 7.772 3 1 1 0 793.0348 2297.1207 S134s Hydrogen 132 (R) RAsEEEENKASEEYIQR (L) RAS(0.99)EEEENKAS(0.0)EEY(0.0)IQR K:TMT10-Lys-Only,s:Phosphorylated S RNF168 66159.9 2 3 1172.1 170.1 HUMAN 1 4.4709 -6.3722 VAAKKRFSVYVTESQ-p Q14232;S149-p VAAKKRFSVYVTESQ 0.463587163997923 0.381775099528738 0.108666666666667 0.0906666666666667 6.15841795750717 5.5564195228749 0.108666666666667 0.0906666666666667 0.242191113681505 0.278200590650805 1.31273572773887 1.20485144931868 Q14232 EIF2B1 Q14232.S149.p_EIF2B1 Q14232_S149s _1_1_149_149 Q14232 Q14232|F5H0D0 Translation initiation factor eIF-2B subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16483.16483.5 13.02 13.02 1.703 5 1 1 0 613.9506 2985.7543 S149s TMT10 146 (K) KRFsVYVTESQPDLSGKK (M) KRFS(0.99)VY(0.0)VT(0.0)ES(0.0)QPDLS(0.0)GKK K:TMT10,s:Phosphorylated S EIF2B1 33996.9 4 2 3473.1 50.17 HUMAN 1 6.1584 5.5564 VAAKRPVSPYSGYNG-p A0A0C4DFY5;S401-p VAAKRPVSPYSGYNG 0.329974972036682 0.76713806264453 -0.226333333333333 -0.0326666666666667 9.00081683243276 1.59022340682955 -0.226333333333333 -0.0326666666666667 0.125868865207235 0.69339013619279 -1.80850424745168 -0.415967393224093 A0A0C4DFY5 GPRC5C A0A0C4DFY5.S401.p_GPRC5C A0A0C4DFY5_S401s _1_1_401_401 A0A0C4DFY5 A0A0C4DFY5|Q9NQ84-2|J9JIE0 G-protein-coupled receptor family C group 5 member C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26731.26731.5 24.45 20.43 1.107 8 1 1 0 741.9807 3625.8911 S401s TMT10 398 (K) RPVsPYSGYNGQLLTSVYQPTEMALMHK (V) RPVS(0.99)PY(0.0)S(0.0)GY(0.0)NGQLLT(0.0)S(0.0)VY(0.0)QPT(0.0)EMALMHK K:TMT10,s:Phosphorylated S GPRC5C 53504 4 4 1470.1 139.57 HUMAN 1 -9.0008 -1.5902 VAAKVIPSPFKHADI-p P34897;S266-p VAAKVIPSPFKHADI 0.189392859052769 0.156254140733103 0.21 0.152666666666667 14.1485355697064 10.6018121878585 0.21 0.152666666666667 0.038472148731369 0.0870600237333798 2.72023083768055 2.08558658778007 P34897 SHMT2 P34897.S266.p_SHMT2 P34897_S266s _1_1_266_266 P34897 P34897|P34897-2|P34897-3 Serine hydroxymethyltransferase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19603.19603.4 15.11 15.11 2.732 5 1 1 0 690.6431 2679.5801 S266s TMT10 263 (K) VIPsPFKHADIVTTTTHK (T) VIPS(0.99)PFKHADIVT(0.0)T(0.0)T(0.0)T(0.0)HK K:TMT10,s:Phosphorylated S SHMT2 56448.4 4 4 2337.1 87.31 HUMAN 1 14.1485 10.6018 VAANHNGSPLSIKEA-p P11172;S214-p VAANHNGSPLSIKEA 0.4288188309716 0.493968079574655 -0.144333333333333 0.0726666666666667 6.76965427426614 4.0956225984934 -0.144333333333333 0.0726666666666667 0.210394592043365 0.389437474490151 -1.42062905842289 0.935203176132954 P11172 UMPS P11172.S214.p_UMPS P11172_S214s_1_1_214_214 P11172 P11172|P11172-3|E9PFD2|P11172-2|P11172-4 Uridine 5'-monophosphate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27492.27492.3 25.18 25.18 3.567 2 1 1 0 908.811 2643.4659 N212n S214s TMT10 200 (R) FIQENVFVAANHnGsPLSIK (E) FIQEN(0.0)VFVAAN(0.0)HN(0.99)GS(0.99)PLS(0.0)IK K:TMT10,n:Deamidated,s:Phosphorylated S UMPS 52677.1 32 1 2067.1 99.58 HUMAN 1 -6.7697 4.0956 VAAPGDATPPAEKKY-p Q96QC0;T256-p VAAPGDATPPAEKKY 0.515813402472715 0.977252677258472 0.102 0.00366666666666667 5.30862099027503 0.143161315356015 0.102 0.00366666666666666 0.294535672069244 0.967573284142341 1.1603257677306 0.0425630957446163 Q96QC0 PPP1R10 Q96QC0.T256.p_PPP1R10 Q96QC0_T256t _1_1_256_256 Q96QC0 Q96QC0 Serine/threonine-protein phosphatase 1 regulatory subunit 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9520.9520.3 18.52 14 7.434 2 1 1 0 816.7764 2368.3439 T256t TMT10 246 (R) QSNVAAPGDAtPPAEKK (Y) QS(0.0)NVAAPGDAT(0.99)PPAEKK K:TMT10,t:Phosphorylated T PPP1R10 99398.3 8 1 592.1 264.27 HUMAN 1 5.3086 0.1432 VAAQSPPSPASAEAL-p J3KQR7;S1549-p VAAQSPPSPASAEAL 0.443553897142878 0.547466657558871 0.123333333333333 0.073 6.50627653781495 3.51853714561162 0.123333333333333 0.073 0.223548801689187 0.444781059921939 1.37428148015226 0.823773450457426 J3KQR7 NotFound J3KQR7.S1549.p_NotFound J3KQR7_S1549s _1_1_1549_1549 J3KQR7 J3KQR7|Q9Y4F5|Q9Y4F5-2|Q9Y4F5-3 Centrosomal protein of 170 kDa protein B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.32971.32971.3 19.98 19.98 1.687 3 1 1 0 822.4507 2385.3703 S1549s TMT10 1542 (R) VAAQSPPsPASAEALLPALPLR (N) VAAQS(0.0)PPS(0.99)PAS(0.0)AEALLPALPLR s:Phosphorylated S CEP170B 172326.6 9 33 51.1 746.11 HUMAN 1 6.5063 3.5185 VAASAAATTPATSPP-p A0A0U1RRH6;T151-p VAASAAATTPATSPP 0.095467434057863 0.0689517361438301 0.314666666666667 0.255333333333333 21.6395815265097 15.4449837367286 0.314666666666667 0.255333333333333 0.00685554281280329 0.0285431320247484 4.23999383913144 2.96032991995944 A0A0U1RRH6 NotFound A0A0U1RRH6.T151.p_NotFound A0A0U1RRH6_T151tT152tT155t_3_3_151_155 A0A0U1RRH6 A0A0U1RRH6|O94880 PHD finger protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23015.23015.5 9.79 9.79 1.104 16 3 3 0 994.2744 4727.4151 T151t T152t T155t TMT10 138 (K) ATVSENVAASAAAttPAtSPPAVNTSPSVPTTTTATEEQVSEPK (K) AT(0.0)VS(0.0)ENVAAS(0.0)AAAT(0.99)T(0.99)PAT(0.99)S(0.0)PPAVNT(0.0)S(0.0)PS(0.0)VPT(0.0)T(0.0)T(0.0)T(0.0)AT(0.0)EEQVS(0.0)EPK K:TMT10,t:Phosphorylated T PHF14 109152.4 1 26 126.1 543.2 HUMAN 1 21.6396 15.445 VAASKERSGVSLAAL-p P16402;S56-p VAASKERSGVSLAAL 0.64244975465608 0.193222714704023 0.0696666666666667 -0.168 3.5924709404351 9.38734499958843 0.0696666666666667 -0.168 0.437273245543838 0.115150413024329 0.838381795334096 -1.87473139090043 P16402 HIST1H1D P16402.S56.p_HIST1H1D P16402_S56s _1_1_56_56 P16402 P16402|P10412|P16403 Histone H1.3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15909.15909.3 14.25 14.25 3.592 2 1 1 0 556.9864 1588.9787 S56s TMT10 54 (K) ERsGVSLAALK (K) ERS(0.99)GVS(0.0)LAALK K:TMT10,s:Phosphorylated S HIST1H1D 22349.5 2 18 738.1 234.77 HUMAN 1 3.5925 -9.3873 VAASMPLSPGGQMEE-p Q9UMN6;S821-p VAASMPLSPGGQMEE 0.377007280567508 0.228396838852781 -0.125 -0.121 7.8309175438277 8.447079673495 -0.125 -0.121 0.164781421729023 0.142985511283351 -1.60581499228017 -1.71206757604966 Q9UMN6 KMT2B Q9UMN6.S821.p_KMT2B Q9UMN6_S821s _1_1_821_821 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27433.27433.2 21.94 21.94 5.599 2 1 1 0 1284.1488 2487.3351 S821s TMT10 814 (K) VAASMPLsPGGQMEEVAGAVK (Q) VAAS(0.0)MPLS(0.99)PGGQMEEVAGAVK K:TMT10,s:Phosphorylated S KMT2B 297845.7 9 8 388.1 332.76 HUMAN 1 -7.8309 -8.4471 VAASPTLSPRQSMIS-p Q16513;S306-p VAASPTLSPRQSMIS 0.279768059006979 0.358471607988196 0.157 0.093 10.4522973923609 5.91080856488203 0.157 0.093 0.0901094337880347 0.256400662802993 2.06041137341275 1.26836100452677 Q16513 PKN2 Q16513.S306.p_PKN2 Q16513_S302sS306s_2_2_302_306 Q16513 Q16513|Q16513-2|Q16513-3|Q16513-4|B1AL79 Serine/threonine-protein kinase N2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.37093.37093.3 20.32 20.32 1.172 4 2 2 0 766.7368 2138.2634 S302s S306s TMT10 291 (R) IIIEELSLVAAsPTLsPR (Q) IIIEELS(0.0)LVAAS(0.99)PT(0.0)LS(0.99)PR s:Phosphorylated S PKN2 112888.4 3 14 389.1 332.6 HUMAN 1 10.4523 5.9108 VAAVKSISPEVSASR-p Q9Y2F5;S925-p VAAVKSISPEVSASR 0.94313933460467 0.00846755883230814 0.012 -0.469666666666667 0.500542974338336 29.41762773489 0.012 -0.469666666666667 0.891139516930269 0.00114350278458695 0.143431401225836 -6.24722383206817 Q9Y2F5 ICE1 Q9Y2F5.S925.p_ICE1 Q9Y2F5_S925s _1_1_925_925 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9715.9715.2 10.41 10.41 2.416 4 1 1 0 671.3344 1261.6949 S925s TMT10 923 (K) SIsPEVSASR (R) S(0.0)IS(0.99)PEVS(0.0)AS(0.0)R s:Phosphorylated S ICE1 250910.2 1 8 216.1 433.09 HUMAN 1 0.5005 -29.4176 VAAYSGDSDNEEELV-p P52756;S624-p VAAYSGDSDNEEELV 0.993608271974075 0.0298138609065799 0.00166666666666665 0.322333333333333 0.0592247972158566 20.646452263632 0.00166666666666664 0.322333333333333 0.98645554931048 0.00861697382313861 0.0177747319247808 4.01516691758113 P52756 RBM5 P52756.S624.p_RBM5 P52756_S624s _1_1_624_624 P52756 P52756 RNA-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27172.27172.4 24.51 24.51 3.272 4 1 1 0 859.6575 3355.6429 S624s TMT10 615 (R) GLVAAYSGDsDNEEELVERLESEEEK (L) GLVAAY(0.0)S(0.0)GDS(0.99)DNEEELVERLES(0.0)EEEK K:TMT10,s:Phosphorylated S RBM5 92665.7 14 4 560.1 271.79 HUMAN 1 0.0592 20.6465 VAAYSGESDSEEEQE-p A0A0A0MR66;S801-p VAAYSGESDSEEEQE 0.349030139499991 0.144402317031321 0.1425 0.250666666666667 8.49323441141386 11.0698439533759 0.1425 0.250666666666667 0.14147397590169 0.0781655889810809 1.72063508219082 2.16736564529174 A0A0A0MR66 RBM10 A0A0A0MR66.S801.p_RBM10 A0A0A0MR66_S801sS803s_2_2_801_803 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2|P98175-3|P98175-4 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16902.16902.3 15.36 15.36 2.143 4 2 2 0 782.3198 2185.0094 S801s S803s TMT10 792 (R) GLVAAYSGEsDsEEEQER (G) GLVAAY(0.0)S(0.0)GES(0.99)DS(0.99)EEEQER s:Phosphorylated S RBM10 110706.4 7 19 270.1 394.36 HUMAN 2 8.4932 11.0698 VACFYGGTPYGGQFE-p Q9NR30;T296-p VACFYGGTPYGGQFE 0.419598745385739 0.00867914906862355 -0.114 -0.452 6.96496775862053 29.2413960262103 -0.114 -0.452 0.201142213064564 0.00119085914849773 -1.45487960045689 -6.19510196358984 Q9NR30 DDX21 Q9NR30.T296.p_DDX21 Q9NR30_T296t _1_1_296_296 Q9NR30 Q9NR30|Q9NR30-2 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26132.26132.3 15.83 15.83 1.395 4 1 1 0 773.3544 2238.0851 T296t TMT10 287 (K) LSVACFYGGtPYGGQFER (M) LS(0.0)VACFY(0.0)GGT(0.99)PY(0.0)GGQFER C:Carbamidomethylation,t:Phosphorylated T DDX21 87856.3 2 22 103.1 590.75 HUMAN 1 -6.965 -29.2414 VACLEGKSPGEKVAI-p Q7Z569;S52-p VACLEGKSPGEKVAI 0.130648315501849 0.00291598815191838 -0.330333333333333 -0.827666666666667 18.2788759051586 38.2852348533118 -0.330333333333333 -0.827666666666667 0.0148632030035808 0.000148414561979116 -3.51892586235408 -9.38620371474758 Q7Z569 BRAP Q7Z569.S52.p_BRAP Q7Z569_S52s _1_1_52_52 Q7Z569 Q7Z569|J3KNN7 BRCA1-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.23655.23655.4 21.13 21.13 6.792 4 1 1 0 647.3536 2506.4154 S52s TMT10 39 (K) TTLASAVACLEGKsPGEK (V) T(0.0)T(0.0)LAS(0.0)AVACLEGKS(0.99)PGEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BRAP 68615.7 3 3 1332.1 153 HUMAN 1 -18.2789 -38.2852 VACQELDSDVDKDNP-p O60232;S78-p VACQELDSDVDKDNP 0.284015346739916 0.697362488221186 0.188333333333333 0.0436666666666667 10.3130785614352 2.15181921986235 0.188333333333333 0.0436666666666667 0.0930448079595274 0.609281621279103 2.03615927783876 0.542102301507389 O60232 SSSCA1 O60232.S78.p_SSSCA1 O60232_S78s _1_1_78_78 O60232 O60232|G3V1B8 Sjoegren syndrome/scleroderma autoantigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25922.25922.4 30.65 26.3 14.886 3 1 1 0 969.2184 3793.8889 S78s TMT10 68 (K) IYCVACQELDsDVDKDNPALNAQAALSQAR (E) IY(0.0)CVACQELDS(0.99)DVDKDNPALNAQAALS(0.0)QAR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SSSCA1 21930.4 3 2 2328.1 87.72 HUMAN 1 10.3131 2.1518 VACSRRLSWGSSRRR-p Q93075;S70-p VACSRRLSWGSSRRR 0.0295447532421185 0.00177043297676807 -0.813333333333333 -1.17833333333333 35.7180539598455 43.4827275184432 -0.813333333333333 -1.17833333333333 0.00026803691085401 4.4846365090261e-05 -8.37903154067317 -11.814482207291 Q93075 TATDN2 Q93075.S70.p_TATDN2 Q93075_S70s _1_1_70_70 Q93075 Q93075 Putative deoxyribonuclease TATDN2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9747.9747.3 8.23 1.52 2.298 3 1 1 0 419.8814 1177.6639 S70s TMT10 68 (R) RLsWGSSR (R) RLS(0.99)WGS(0.0)S(0.0)R s:Phosphorylated S TATDN2 86048.5 1 2 1656.1 123.28 HUMAN 1 -35.7181 -43.4827 VADAKGDSESEEDED-p P13861;S78-p VADAKGDSESEEDED 0.266142547410633 0.0523667387775417 0.158 0.225333333333333 10.895221249135 17.0927522947889 0.158 0.225333333333333 0.0813725404892178 0.0195310130643942 2.13776290106284 3.27841036617992 P13861 PRKAR2A P13861.S78.p_PRKAR2A P13861_S78sS80s_2_2_78_80 P13861 P13861|P13861-2 cAMP-dependent protein kinase type II-alpha regulatory subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16794.17545.3 20.6 20.6 20.599 3 2 2 0 954.7463 2702.2842 S78s S80s Hydrogen 71 (R) VADAKGDsEsEEDEDLEVPVPSR (F) VADAKGDS(0.99)ES(0.99)EEDEDLEVPVPS(0.0)R K:TMT10-Lys-Only,s:Phosphorylated S PRKAR2A 45859.9 40 5 1121.1 175.11 HUMAN 1 10.8952 17.0928 VADEDKQSRLRYQNL-p Q9H6X4;S53-p VADEDKQSRLRYQNL 0.30062605052911 0.451895030622627 0.168333333333333 -0.13 9.80420016114027 4.59678223033244 0.168333333333333 -0.13 0.104611633565831 0.346993849515922 1.94771255402792 -1.02942523582465 Q9H6X4 TMEM134 Q9H6X4.S53.p_TMEM134 Q9H6X4_S53s _1_1_53_53 Q9H6X4 Q9H6X4|Q9H6X4-3|Q9H6X4-2|G3V1M5|B4E0E3 Transmembrane protein 134 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8308.8308.3 7.33 7.33 99 1 1 1 0 634.6529 1821.9656 S53s Hydrogen 44 (R) FEVADEDKQsRLR (Y) FEVADEDKQS(1.0)RLR K:TMT10-Lys-Only,s:Phosphorylated S TMEM134 21757.1 3 1 4872.1 25.6 HUMAN 1 9.8042 -4.5968 VADERVDYVVVDQQK-p Q13480-2;Y689-p VADERVDYVVVDQQK 0.154452652161597 0.136126020428918 -0.501333333333333 -0.307 16.301080964545 11.4118218939125 -0.501333333333333 -0.307 0.023436454063647 0.0722466660506051 -3.12621652077857 -2.22737306505047 Q13480 GAB1 Q13480.2.Y689.p_GAB1 Q13480-2_Y689y _1_1_689_689 Q13480-2 Q13480-2|B7Z3B9 Isoform 2 of GRB2-associated-binding protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.16268.16314.4 22.72 20.53 7.075 6 1 1 0 713.354 2770.4259 Y689y TMT10 675 (K) SSGSGSSVADERVDyVVVDQQK (T) S(0.0)S(0.0)GS(0.0)GS(0.0)S(0.0)VADERVDY(0.99)VVVDQQK K:TMT10,y:Phosphorylated Y GAB1 80631.3 5 1 146.1 22.72 HUMAN 1 -16.3011 -11.4118 VADGCRETPTKTLEG-p Q8IVF2;T228-p VADGCRETPTKTLEG 0.134044328097277 0.0267993741022705 -0.613666666666667 -0.889333333333333 17.9728500488233 21.3385745569159 -0.613666666666667 -0.889333333333333 0.0159483219831517 0.00734754990160881 -3.45677275694791 -4.16805708848338 Q8IVF2 AHNAK2 Q8IVF2.T228.p_AHNAK2 Q8IVF2_T228t _1_1_228_228 Q8IVF2 Q8IVF2|Q8IVF2-3 Protein AHNAK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7414.7414.4 9.86 7.11 1.52 3 1 1 0 680.3378 2638.3597 T228t TMT10 215 (K) EKEDTDVADGCREtPTK (T) EKEDT(0.0)DVADGCRET(0.99)PT(0.0)K K:TMT10,C:Carbamidomethylation,t:Phosphorylated T AHNAK2 617759.6 1 1 237.1 418.35 HUMAN 1 -17.9729 -21.3386 VADGQESTPPTPAPT-p O00401;T457-p VADGQESTPPTPAPT 0.160078188700121 0.218400004885306 -0.241666666666667 -0.124333333333333 15.9224009955553 8.69509190655498 -0.241666666666667 -0.124333333333333 0.0255717176450922 0.135048824816063 -3.05330460038484 -1.75497468790979 O00401 WASL O00401.T457.p_WASL O00401_T457t _1_1_457_457 O00401 O00401 Neural Wiskott-Aldrich syndrome protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.37347.37347.4 18.21 18.21 1.146 6 1 1 0 859.934 3356.7482 T457t TMT10 449 (K) SVADGQEStPPTPAPTSGIVGALMEVMQK (R) S(0.0)VADGQES(0.0)T(0.99)PPT(0.0)PAPT(0.0)S(0.0)GIVGALMEVMQK K:TMT10,t:Phosphorylated T WASL 55225.3 2 4 2628.1 76.35 HUMAN 1 -15.9224 -8.6951 VADSLRASDGQLQAK-p Q9BRG2;S201-p VADSLRASDGQLQAK 0.650145286992043 0.990324797150279 0.0606666666666667 0.00133333333333335 3.50716890846703 0.0622071982297175 0.0606666666666667 0.00133333333333335 0.445946858803963 0.985778359935016 0.821668785874809 0.0186618418705109 Q9BRG2 SH2D3A Q9BRG2.S201.p_SH2D3A Q9BRG2_S201s _1_1_201_201 Q9BRG2 Q9BRG2|Q9BRG2-2 SH2 domain-containing protein 3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22453.22453.3 18.46 13.43 1.119 3 1 1 0 902.1547 2624.4772 S201s TMT10 187 (K) APAPLGTVADSLRAsDGQLQAK (A) APAPLGT(0.0)VADS(0.0)LRAS(0.99)DGQLQAK K:TMT10,s:Phosphorylated S SH2D3A 63662.5 5 6 1551.1 132.49 HUMAN 1 3.5072 0.0622 VAEALGHSPKDPGGG-p Q8IU81;S436-p VAEALGHSPKDPGGG 0.952986039794177 0.0954269904939943 -0.00966666666666667 0.205 0.412652847616044 13.4948751135904 -0.00966666666666666 0.205 0.90935763025954 0.0447211011674588 -0.119278898942846 2.59914343562059 Q8IU81 IRF2BP1 Q8IU81.S436.p_IRF2BP1 Q8IU81_S436s _1_1_436_436 Q8IU81 Q8IU81 Interferon regulatory factor 2-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11563.11777.4 19.84 19.84 99 1 1 1 0 628.3288 2430.3254 S436s TMT10 428 (K) NVAEALGHsPKDPGGGGGPVR (A) NVAEALGHS(1.0)PKDPGGGGGPVR K:TMT10,s:Phosphorylated S IRF2BP1 62599.7 8 8 274.1 392.67 HUMAN 1 -0.4127 13.4949 VAEAPVGSKAPSIDG-p Q9H0E9-2;S456-p VAEAPVGSKAPSIDG 0.0948633510902073 0.00377230104265856 0.457666666666667 0.871333333333333 21.7168738882139 35.9338244394404 0.457666666666667 0.871333333333334 0.0067346124858255 0.000255045435855613 4.2574841460943 8.44442232323564 Q9H0E9 BRD8 Q9H0E9.2.S456.p_BRD8 Q9H0E9-2_S456sS460s_2_2_456_460 Q9H0E9-2 Q9H0E9|Q9H0E9-2|B5MCW3|Q9H0E9-4|Q9H0E9-3 Isoform 2 of Bromodomain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21878.21878.5 10.9 10.9 4.377 3 2 2 0 735.5879 3513.9822 S456s S460s TMT10 447 (R) SGVAEAPVGsKAPsIDGKEELDLAEK (M) S(0.0)GVAEAPVGS(0.99)KAPS(0.99)IDGKEELDLAEK K:TMT10,s:Phosphorylated S BRD8 103294.1 2 11 654.1 253.82 HUMAN 1 21.7169 35.9338 VAEEDNGSIGEETDS-p G0XQ39;S766-p VAEEDNGSIGEETDS 0.960524635869147 0.162968503706288 0.01 -0.169 0.335890996669437 10.3586019001062 0.01 -0.169 0.925573475389103 0.0920745934627558 0.0978503465023222 -2.04322670439349 G0XQ39 STIM1 G0XQ39.S766.p_STIM1 G0XQ39_S766s _1_1_766_766 G0XQ39 G0XQ39|Q13586|E9PNJ4 STIM1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9606.9606.3 18.85 18.85 4.753 4 1 1 0 896.0936 2606.2946 S766s TMT10 758 (K) AVAEEDNGsIGEETDSSPGRK (K) AVAEEDNGS(0.99)IGEET(0.0)DS(0.0)S(0.0)PGRK K:TMT10,s:Phosphorylated S STIM1 88986.4 6 6 771.1 227.77 HUMAN 1 0.3359 -10.3586 VAEGEARSPSHKKRA-p O00257;S291-p VAEGEARSPSHKKRA 0.672055923167882 0.00129606731851265 -0.06 -1.03933333333333 3.23342392604733 47.1441287209555 -0.06 -1.03933333333333 0.474960624988416 1.93013251940502e-05 -0.767437355783702 -13.8636434241807 O00257 CBX4 O00257.S291.p_CBX4 O00257_S291s _1_1_291_291 O00257 O00257 E3 SUMO-protein ligase CBX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.6617.6617.5 12.13 12.13 1.538 3 1 1 0 582.1324 2826.6607 S291s TMT10 279 (K) IKSGEVAEGEARsPSHKK (R) IKS(0.0)GEVAEGEARS(0.99)PS(0.0)HKK K:TMT10,s:Phosphorylated S CBX4 61708.7 5 2 1504.1 135.77 HUMAN 1 -3.2334 -47.1441 VAEGLSGSLVQEPFQ-p Q9ULW0;S654-p VAEGLSGSLVQEPFQ 0.396320278249166 0.00885809255924247 0.202666666666667 -0.473333333333333 7.41824970423527 29.0838333872497 0.202666666666667 -0.473333333333333 0.181207024692154 0.00123485698100745 1.53404505119293 -6.14879236297016 Q9ULW0 TPX2 Q9ULW0.S654.p_TPX2 Q9ULW0_S654s _1_1_654_654 Q9ULW0 Q9ULW0-2 Targeting protein for Xklp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30841.31337.3 15.21 15.21 1.166 4 1 1 0 910.1414 2648.4547 S654s TMT10 646 (K) SVAEGLSGsLVQEPFQLATEK (R) S(0.0)VAEGLS(0.0)GS(0.99)LVQEPFQLAT(0.0)EK K:TMT10,s:Phosphorylated S TPX2 86279.1 1 12 599.1 263.33 HUMAN 1 7.4182 -29.0838 VAEGVRLSPEPGREG-p Q9NWK9;S25-p VAEGVRLSPEPGREG 0.509351617697437 0.824898780665274 0.0876666666666667 -0.0356666666666667 5.41000396201435 1.17079021360594 0.0877581209620692 -0.0356666666666667 0.287739578972221 0.763696813697938 1.17869107461217 -0.31615532412982 Q9NWK9 ZNHIT6 Q9NWK9.S25.p_ZNHIT6 Q9NWK9_S25s _1_1_25_25 Q9NWK9 Q9NWK9|Q9NWK9-2 Box C/D snoRNA protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20520.20520.5 20.65 20.65 1.166 5 1 1 0 986.9028 4850.5073 S25s TMT10 11 (K) SGGGLHSVAEGVRLsPEPGREGVRDLAGAEEFGGGEEGTGLTGIK (E) S(0.0)GGGLHS(0.0)VAEGVRLS(0.99)PEPGREGVRDLAGAEEFGGGEEGT(0.0)GLT(0.0)GIK K:TMT10,s:Phosphorylated S ZNHIT6 54545 6 2 2877.1 67.51 HUMAN 1 5.41 -1.1708 VAENSRSTQRLMLPP-p P18858;T389-p VAENSRSTQRLMLPP 0.442299902006713 0.167788200693427 -0.102666666666667 -0.227333333333333 6.52717869563508 10.1969774491653 -0.102666666666667 -0.227333333333333 0.222475468722269 0.095565746168806 -1.37796708019592 -2.01512085099568 P18858 LIG1 P18858.T389.p_LIG1 P18858_S386sS388sT389t_3_3_386_389 P18858 P18858|P18858-3|F5GZ28 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18231.18231.5 8.09 5.85 7.592 6 3 3 0 739.7618 3453.8725 N385n S386s S388s T389t Hydrogen 377 (K) GDVGLVAEnsRstQRLMLPPPPLTASGVFSK (F) GDVGLVAEN(1.0)S(0.99)RS(0.99)T(0.99)QRLMLPPPPLT(0.0)AS(0.0)GVFS(0.0)K K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S,t:Phosphorylated T LIG1 102361.8 1 23 302.1 376.44 HUMAN 1 -6.5272 -10.197 VAEPEEGSGEEVPME-p Q92610;S1205-p VAEPEEGSGEEVPME 0.336559539837921 0.260818153084703 0.181333333333333 0.112666666666667 8.81558125291019 7.69184424027088 0.181333333333333 0.112666666666667 0.131353568164346 0.170143583680639 1.77643967768848 1.58117276426138 Q92610 ZNF592 Q92610.S1205.p_ZNF592 Q92610_S1205s _1_1_1205_1205 Q92610 Q92610 Zinc finger protein 592 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24901.24901.4 30.94 26.31 5.915 2 1 1 0 1100.7238 4319.9129 S1205s TMT10 1178 (K) VRDQEEEEEEEAAAAEMAVEVAEPEEGsGEEVPMETR (E) VRDQEEEEEEEAAAAEMAVEVAEPEEGS(0.99)GEEVPMET(0.0)R s:Phosphorylated S ZNF592 140207.3 2 18 164.1 494.76 HUMAN 1 8.8156 7.6918 VAERSCASPLWHCDQ-p Q6ZNB6;S356-p VAERSCASPLWHCDQ 0.185461409283341 0.869055249167202 0.308666666666667 -0.0166666666666667 14.3778898067562 0.858729552117587 0.308666666666667 -0.0166666666666667 0.0364931220267057 0.820591558048801 2.76256766012829 -0.238033881033425 Q6ZNB6 NFXL1 Q6ZNB6.S356.p_NFXL1 Q6ZNB6_S356s _1_1_356_356 Q6ZNB6 Q6ZNB6|Q6ZNB6-2 NF-X1-type zinc finger protein NFXL1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15352.15352.3 20.1 20.1 1.129 2 1 1 0 781.687 2263.0822 S356s TMT10 353 (R) SCAsPLWHCDQVCGK (T) S(0.0)CAS(0.99)PLWHCDQVCGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NFXL1 107784.8 1 4 2273.1 90.3 HUMAN 1 14.3779 -0.8587 VAEVGFSSNDDEDKD-p Q9Y4B4;S1451-p VAEVGFSSNDDEDKD 0.698972630688095 0.890072423949469 0.056 0.0163333333333334 2.92275396134243 0.709524944933625 0.056 0.0163333333333334 0.510181379614675 0.84927336812338 0.704678607986731 0.199320940850307 Q9Y4B4 RAD54L2 Q9Y4B4.S1451.p_RAD54L2 Q9Y4B4_S1450sS1451s_2_2_1450_1451 Q9Y4B4 Q9Y4B4 Helicase ARIP4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25683.25683.4 21.55 21.55 6.801 5 2 2 0 1139.2708 4394.1403 S1450s S1451s TMT10 1434 (R) SQVPPFDSHEVAEVGFssNDDEDKDDDVIEVTGK (-) S(0.0)QVPPFDS(0.0)HEVAEVGFS(0.99)S(0.99)NDDEDKDDDVIEVT(0.0)GK K:TMT10,s:Phosphorylated S RAD54L2 164135.1 2 8 1338.1 152.26 HUMAN 1 2.9228 0.7095 VAFGESQSEDEQFEN-p Q9NZN5;S753-p VAFGESQSEDEQFEN 0.471731353923055 0.0775875582668693 0.0973333333333333 0.198333333333333 6.02164433383644 14.7286718722884 0.0973333333333333 0.197575569171425 0.24993988554853 0.0336614494626592 1.28841844517728 2.8259133159308 Q9NZN5 ARHGEF12 Q9NZN5.S753.p_ARHGEF12 Q9NZN5_S753s _1_1_753_753 Q9NZN5 Q9NZN5|Q9NZN5-2|E9PMR6 Rho guanine nucleotide exchange factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30456.30456.4 32.5 27.97 2.161 5 1 1 0 1128.2726 4430.1101 S753s TMT10 742 (R) KFDSVAFGESQsEDEQFENDLETDPPNWQQLVSR (E) KFDS(0.0)VAFGES(0.0)QS(0.99)EDEQFENDLET(0.0)DPPNWQQLVS(0.0)R K:TMT10,s:Phosphorylated S ARHGEF12 174199.1 13 8 251.1 406.16 HUMAN 1 6.0216 14.7287 VAGALDVSFNKFIPL-p Q99627;S175-p VAGALDVSFNKFIPL 0.111618830719723 0.0103372263610749 -0.837333333333333 -0.598 19.8997341639589 27.87614958203 -0.837333333333333 -0.598 0.0102335563099596 0.00163074119319528 -3.85746520836333 -5.802724352666 Q99627 COPS8 Q99627.S175.p_COPS8 Q99627_S175s _1_1_175_175 Q99627 Q99627|E9PGT6|Q99627-2 COP9 signalosome complex subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20427.20427.3 17.15 14.92 99 1 1 1 0 705.0723 2033.2362 S175s TMT10 166 (R) KPVAGALDVsFNK (F) KPVAGALDVS(1.0)FNK K:TMT10,s:Phosphorylated S COPS8 23282.3 3 2 3851.1 41.68 HUMAN 1 -19.8997 -27.8761 VAGEAAETDSEPEPE-p Q6QNY0;T63-p VAGEAAETDSEPEPE 0.685043585085589 0.165786722582961 0.058 0.143666666666667 3.08106412378316 10.2630790610192 0.058 0.143666666666667 0.491918989173685 0.0941222052302114 0.736829785118855 2.02661167070262 Q6QNY0 BLOC1S3 Q6QNY0.T63.p_BLOC1S3 Q6QNY0_T63tS65s_2_2_63_65 Q6QNY0 Q6QNY0 Biogenesis of lysosome-related organelles complex 1 subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12954.13158.3 22.02 22.02 22.025 3 2 2 0 913.7266 2579.231 T63t S65s TMT10 56 (R) VAGEAAEtDsEPEPEPEPTAAPR (D) VAGEAAET(0.99)DS(0.99)EPEPEPEPT(0.0)AAPR t:Phosphorylated T,s:Phosphorylated S BLOC1S3 21369.4 6 3 4375.1 32.5 HUMAN 1 3.0811 10.2631 VAGGGGASDPEDRSG-p Q96DU7;S378-p VAGGGGASDPEDRSG 0.59351749575714 0.648752314195921 0.116666666666667 0.0766666666666667 4.17951311470903 2.56331295048322 0.116666666666667 0.0766666666666667 0.381987092814465 0.554202786362298 0.951291893869627 0.630148189410045 Q96DU7 ITPKC Q96DU7.S378.p_ITPKC Q96DU7_S378s _1_1_378_378 Q96DU7 Q96DU7 Inositol-trisphosphate 3-kinase C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25858.25858.5 12.59 12.59 1.767 10 1 1 0 1131.1162 5571.5997 S378s TMT10 330 (R) LIITPETPEPEAQPVGPPSRVEGGSGGFSSASSFDESEDDVVAGGGGAsDPEDR (S) LIIT(0.0)PET(0.0)PEPEAQPVGPPS(0.0)RVEGGS(0.0)GGFS(0.0)S(0.0)AS(0.0)S(0.0)FDES(0.0)EDDVVAGGGGAS(0.99)DPEDR s:Phosphorylated S ITPKC 75947.8 1 4 2777.1 71.06 HUMAN 1 4.1795 2.5633 VAGGLLGSGTRASPD-p Q9BRK4;S296-p VAGGLLGSGTRASPD 0.0622506947834567 0.00700007098176202 0.619666666666667 0.902666666666667 26.2539166839255 30.8839070333949 0.619666666666667 0.902666666666667 0.00236923604682301 0.000815848081593221 5.36852768002031 6.69460254765285 Q9BRK4 LZTS2 Q9BRK4.S296.p_LZTS2 Q9BRK4_S296s _1_1_296_296 Q9BRK4 Q9BRK4 Leucine zipper putative tumor suppressor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16234.16234.2 9.37 6.58 1.316 2 1 1 0 648.8465 1216.7211 S296s TMT10 289 (R) VAGGLLGsGTR (A) VAGGLLGS(0.99)GT(0.0)R s:Phosphorylated S LZTS2 73442.7 1 5 710.1 238.65 HUMAN 1 26.2539 30.8839 VAGKEDNTDTDQEKK-p Q7Z4S6-5;T566-p VAGKEDNTDTDQEKK 0.183151029010853 0.176181651478718 -0.469333333333333 -0.144666666666667 14.4936532909858 9.91604027588289 -0.469333333333333 -0.144666666666667 0.0355332286819115 0.101952052262332 -2.78401383017639 -1.96633974693887 Q7Z4S6 KIF21A Q7Z4S6.5.T566.p_KIF21A Q7Z4S6-5_T566t _1_1_566_566 Q7Z4S6-5 Q7Z4S6-4|Q7Z4S6-2|Q7Z4S6-5|Q7Z4S6-3|Q7Z4S6-6 Isoform 5 of Kinesin-like protein KIF21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7269.7269.3 15.3 9.67 1.198 3 1 1 0 802.0666 2324.2185 T566t TMT10 558 (K) SVAGKEDNtDTDQEK (K) S(0.0)VAGKEDNT(0.99)DT(0.0)DQEK K:TMT10,t:Phosphorylated T KIF21A 184163.5 3 9 390.1 332.37 HUMAN 1 -14.4937 -9.916 VAGLVAHSDLDERAI-p O60506;S55-p VAGLVAHSDLDERAI 0.579628301622231 0.650766488643602 -0.0733333333333333 -0.0443333333333333 4.3559678668421 2.54688934073237 -0.0733333333333333 -0.043693153265514 0.366777945354913 0.556302569529661 -0.98459046904133 -0.626695232417821 O60506 SYNCRIP O60506.S55.p_SYNCRIP O60506_S55s _1_1_55_55 O60506 O60506|O60506-2|O60506-3|O60506-4 Heterogeneous nuclear ribonucleoprotein Q HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27893.27893.4 17.38 17.38 11.656 2 1 1 0 745.8928 2900.577 S55s TMT10 39 (K) VAEKLDEIYVAGLVAHsDLDER (A) VAEKLDEIY(0.0)VAGLVAHS(0.99)DLDER K:TMT10,s:Phosphorylated S SYNCRIP 69829.6 1 8 1376.1 148.68 HUMAN 1 -4.356 -2.5469 VAGNRLQSLPFALTH-p A0A0G2JPP5;S372-p VAGNRLQSLPFALTH 0.310677599800396 0.824824159835174 -0.29 -0.0346666666666666 9.49054947672602 1.17209479038508 -0.29 -0.0346666666666667 0.112446269604379 0.763467441337352 -1.89332042177652 -0.316474489131649 A0A0G2JPP5 SCRIB A0A0G2JPP5.S372.p_SCRIB A0A0G2JPP5_S372s _1_1_372_372 A0A0G2JPP5 Q14160-3|A0A0G2JPP5 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.34177.34177.3 20.12 20.12 4.023 2 1 1 0 711.7475 2053.2574 S372s TMT10 370 (R) LQsLPFALTHLNLK (A) LQS(0.99)LPFALT(0.0)HLNLK K:TMT10,s:Phosphorylated S SCRIB 178690.9 1 9 22.1 1004.81 HUMAN 1 -9.4905 -1.1721 VAGRTCCTPQLAHLK-p Q86YC2;T757-p VAGRTCCTPQLAHLK 0.135547194579556 0.113598880940038 0.312333333333333 -0.213 17.8041510000539 12.4578247727444 0.312333333333333 -0.213 0.0165800142697667 0.0567828939602478 3.42273717461328 -2.41255504329289 Q86YC2 PALB2 Q86YC2.T757.p_PALB2 Q86YC2_T757t _1_1_757_757 Q86YC2 Q86YC2|H3BN63 Partner and localizer of BRCA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.13416.13416.3 9.93 9.93 1.113 2 1 1 0 622.9841 1786.9708 T757t TMT10 754 (R) TCCtPQLAHLK (D) T(0.0)CCT(0.99)PQLAHLK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T PALB2 133061.7 1 10 934.1 198.86 HUMAN 1 17.8042 -12.4578 VAGSQVHSPGINPLK-p O00512;S857-p VAGSQVHSPGINPLK 0.464416584532636 0.0151762863813809 0.107666666666667 0.358666666666667 6.14581468888839 25.1595019736555 0.107666666666667 0.358666666666667 0.242894975490625 0.00304824452642866 1.31049793350257 5.07789685941734 O00512 BCL9 O00512.S857.p_BCL9 O00512_S857s _1_1_857_857 O00512 O00512 B-cell CLL/lymphoma 9 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21183.21183.4 18.52 18.52 5.037 3 1 1 0 731.9199 2844.6914 S857s TMT10 844 (R) KPLDISVAGSQVHsPGINPLK (S) KPLDIS(0.0)VAGS(0.0)QVHS(0.99)PGINPLK K:TMT10,s:Phosphorylated S BCL9 149515.8 3 11 313.1 369.9 HUMAN 1 6.1458 25.1595 VAHQPPYTQPHCSPR-p Q96RT1-8;T1312-p VAHQPPYTQPHCSPR 0.24787473743719 0.186920426134675 0.269666666666667 0.183 11.574469862655 9.58015681619109 0.269666666666667 0.183 0.0695909898287246 0.110149953558908 2.25707671881158 1.90811694022859 Q96RT1 ERBB2IP Q96RT1.8.T1312.p_ERBB2IP Q96RT1-8_T1312t _1_1_1312_1312 Q96RT1-8 Q96RT1-8|Q96RT1-2|Q96RT1-9|Q96RT1-3|Q96RT1-5|Q96RT1-4|Q96RT1-6|B4DIP2 Isoform 8 of Erbin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.4725.4725.4 11.24 11.24 1.105 3 1 1 0 521.7485 2004.0071 T1312t TMT10 1305 (K) VAHQPPYtQPHCSPR (Q) VAHQPPY(0.0)T(0.99)QPHCS(0.0)PR C:Carbamidomethylation,t:Phosphorylated T ERBIN 159762.8 4 29 81.1 633.5 HUMAN 1 11.5745 9.5802 VAINRLLSMGQLDLL-p Q9H1D9;S59-p VAINRLLSMGQLDLL 0.163356162708595 0.00744544229919203 -0.483333333333333 0.485 15.762289569095 30.4331363816687 -0.483333333333333 0.483040265098512 0.0265320644196005 0.000905078736357731 -3.02267929506123 6.55440925084811 Q9H1D9 POLR3F Q9H1D9.S59.p_POLR3F Q9H1D9_S59s _1_1_59_59 Q9H1D9 Q9H1D9 DNA-directed RNA polymerase III subunit RPC6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34701.34701.2 7.78 1.94 99 1 1 1 0 784.4272 1487.8817 S59s TMT10 57 (R) LLsMGQLDLLR (S) LLS(1.0)MGQLDLLR s:Phosphorylated S POLR3F 36082.7 2 1 7090.1 7.78 HUMAN 1 -15.7623 30.4331 VAKAQQATPGGAAPT-p Q9BX68;T47-p VAKAQQATPGGAAPT 0.332506650037462 0.666014956570252 0.149666666666667 -0.043 8.92800898877103 2.41554200818346 0.149666666666667 -0.043 0.127996796750024 0.573384302574756 1.79590078432655 -0.598904542834297 Q9BX68 HINT2 Q9BX68.T47.p_HINT2 Q9BX68_T47t _1_1_47_47 Q9BX68 Q9BX68 Histidine triad nucleotide-binding protein 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16297.16297.3 15.92 15.92 9.737 3 1 1 0 627.9854 1801.9758 T47t TMT10 43 (K) AQQAtPGGAAPTIFSR (I) AQQAT(0.99)PGGAAPT(0.0)IFS(0.0)R t:Phosphorylated T HINT2 17218.5 1 1 5839.1 15.92 HUMAN 1 8.928 -2.4155 VAKCWDPSPRGCFTL-p Q92997;S340-p VAKCWDPSPRGCFTL 0.0285082967552234 0.0156960764347204 -0.914666666666667 -0.506 36.1868046724434 24.9404003844868 -0.914666666666667 -0.506 0.000240613246414332 0.00320597374595728 -8.55888976506385 -5.02244866912379 Q92997 DVL3 Q92997.S340.p_DVL3 Q92997_S340s _1_1_340_340 Q92997 Q92997|Q92997-2 Segment polarity protein dishevelled homolog DVL-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10431.10431.2 7.72 1.32 99 1 1 1 0 613.7646 1146.5563 S340s TMT10 336 (K) CWDPsPR (G) CWDPS(1.0)PR C:Carbamidomethylation,s:Phosphorylated S DVL3 78395.8 1 5 2133.1 96.37 HUMAN 1 -36.1868 -24.9404 VAKNTSMSPRQRRAQ-p Q9Y385;S251-p VAKNTSMSPRQRRAQ 0.864453015861562 0.0157267407858384 0.0336666666666667 -0.376666666666667 1.23310862348156 24.929270346459 0.0336666666666667 -0.376666666666667 0.752816514553378 0.00321420050768873 0.331370750348064 -5.01964335132762 Q9Y385 UBE2J1 Q9Y385.S251.p_UBE2J1 Q9Y385_S251s _1_1_251_251 Q9Y385 Q9Y385 Ubiquitin-conjugating enzyme E2 J1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4595.4595.2 8.84 3.32 1.407 3 1 1 0 551.2521 1021.5298 S251s TMT10 247 (K) NTSMsPR (Q) NT(0.0)S(0.0)MS(0.99)PR s:Phosphorylated S UBE2J1 35426.2 4 2 3848.1 41.74 HUMAN 1 1.2331 -24.9293 VAKRLWDSGQKEAGG-p Q96RE7;S188-p VAKRLWDSGQKEAGG 0.334770198107144 0.00219928027114295 -0.175 -0.773333333333333 8.87168510534898 41.2663222288524 -0.175 -0.773333333333333 0.129667605028882 7.47081147387625e-05 -1.7861511353764 -10.7158631234747 Q96RE7 NACC1 Q96RE7.S188.p_NACC1 Q96RE7_S188s _1_1_188_188 Q96RE7 Q96RE7 Nucleus accumbens-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11942.11942.3 10.69 10.69 99 1 1 1 0 509.9416 1447.8422 S188s TMT10 184 (K) RLWDsGQK (E) RLWDS(1.0)GQK K:TMT10,s:Phosphorylated S NACC1 57941.9 2 2 2142.1 95.99 HUMAN 1 -8.8717 -41.2663 VALDGGRSPDVLSLE-p Q66GS9;S253-p VALDGGRSPDVLSLE 0.762020505133756 0.409151663723993 -0.0486666666666667 0.0793333333333334 2.25914644750101 5.16605325465211 -0.0486666666666667 0.0793333333333334 0.59440897092366 0.3043649751994 -0.565456657015082 1.13416723536183 Q66GS9 CEP135 Q66GS9.S253.p_CEP135 Q66GS9_S253s _1_1_253_253 Q66GS9 Q66GS9 Centrosomal protein of 135 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23952.23952.3 10.28 10.28 1.573 4 1 1 0 760.7319 2200.2135 S253s TMT10 244 (R) LSVALDGGRsPDVLSLESR (N) LS(0.0)VALDGGRS(0.99)PDVLS(0.0)LES(0.0)R s:Phosphorylated S CEP135 133944.3 1 2 2135.1 96.32 HUMAN 1 -2.2591 5.1661 VALKRVPSPTPAPKE-p Q9UQ35;S2581-p VALKRVPSPTPAPKE 0.314792106531554 0.893796276220667 0.159666666666667 0.0133333333333333 9.39222104358971 0.684075984777759 0.159666666666667 0.0133333333333333 0.11502120037673 0.854264583439932 1.87628255450668 0.192621710681401 Q9UQ35 SRRM2 Q9UQ35.S2581.p_SRRM2 Q9UQ35_S2581s _1_1_2581_2581 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7364.7364.2 12.37 9.37 4.386 2 1 1 0 601.8228 1122.672 S2581s Hydrogen 2579 (R) VPsPTPAPK (E) VPS(0.99)PT(0.0)PAPK K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 20 160 2.1 3310.34 HUMAN 1 9.3922 0.6841 VALNEAESNHERRLR-p F5H269;S1365-p VALNEAESNHERRLR 0.290027496028783 0.751505054147741 0.158333333333333 0.0373333333333334 10.1351429475604 1.71416980033375 0.158333333333333 0.0373333333333333 0.0969361362350448 0.673880702556135 2.00519949859125 0.44448035504951 F5H269 DMXL1 F5H269.S1365.p_DMXL1 F5H269_S1365s _1_1_1365_1365 F5H269 F5H269|Q9Y485 DmX-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16849.16849.3 19.83 16.9 99 1 1 1 0 769.6931 2227.0975 S1365s TMT10 1352 (K) CIAGEVVALNEAEsNHER (R) CIAGEVVALNEAES(1.0)NHER C:Carbamidomethylation,s:Phosphorylated S DMXL1 344060.7 1 8 523.1 283.18 HUMAN 1 10.1351 1.7142 VALPSPPTPSDGGTK-p Q8N3E9;T37-p VALPSPPTPSDGGTK 0.869683037439442 0.384281224018588 0.028 0.0896666666666667 1.18453378756948 5.52000352053158 0.028 0.0896666666666667 0.761283857969 0.280543136377736 0.319547074043947 1.19829171742869 Q8N3E9 PLCD3 Q8N3E9.T37.p_PLCD3 Q8N3E9_T37t _1_1_37_37 Q8N3E9 Q8N3E9 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25190.25190.4 23.17 21.44 2.182 4 1 1 0 903.7208 3531.9009 T37t Hydrogen 11 (R) RPPEEPPVAAQVAAQVAAPVALPSPPtPSDGGTK (R) RPPEEPPVAAQVAAQVAAPVALPS(0.0)PPT(0.99)PS(0.0)DGGT(0.0)K K:TMT10-Lys-Only,t:Phosphorylated T PLCD3 90169.7 2 1 1567.1 131.06 HUMAN 1 1.1845 5.52 VALPTVASKGPGSDS-p Q8NI35;S351-p VALPTVASKGPGSDS 0.821402155666812 0.0669955802353756 -0.0373333333333333 -0.448 1.64358031780459 15.6147382413179 -0.0373333333333334 -0.448 0.684923343766946 0.0274489777942183 -0.428339131072048 -2.99250896750504 Q8NI35 INADL Q8NI35.S351.p_INADL Q8NI35_S351s _1_1_351_351 Q8NI35 Q8NI35|Q8NI35-2|Q8NI35-3|Q8NI35-4 InaD-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33205.33205.4 22.93 22.93 1.22 4 1 1 0 749.1652 2913.6701 S351s TMT10 327 (R) DPAGDISVTPPAPAALPVALPTVAsK (G) DPAGDIS(0.0)VT(0.0)PPAPAALPVALPT(0.0)VAS(0.99)K K:TMT10,s:Phosphorylated S PATJ 197163.3 6 6 127.1 542.92 HUMAN 1 -1.6436 -15.6147 VALQPLLTPKDEVQL-p Q9C0B5;T659-p VALQPLLTPKDEVQL 0.233628206047255 0.00244099968821355 -0.26 -0.847 12.1239548055701 40.0819084705501 -0.26 -0.847 0.0613203350923099 9.81316616927165e-05 -2.35434016710703 -10.168265788666 Q9C0B5 ZDHHC5 Q9C0B5.T659.p_ZDHHC5 Q9C0B5_T659t _1_1_659_659 Q9C0B5 Q9C0B5 Palmitoyltransferase ZDHHC5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26776.26776.4 23.15 20.25 9.984 3 1 1 0 897.4939 3506.9925 T659t TMT10 642 (K) AQPGVSETEEVALQPLLtPKDEVQLK (T) AQPGVS(0.0)ET(0.0)EEVALQPLLT(0.99)PKDEVQLK K:TMT10,t:Phosphorylated T ZDHHC5 78285 1 21 134.1 530.74 HUMAN 1 -12.124 -40.0819 VALRTPRTPASQDRI-p Q99459;T355-p VALRTPRTPASQDRI 0.812521070407363 0.520704854173619 0.0536666666666667 -0.115 1.73456766656338 3.80752373794915 0.0536666666666667 -0.115 0.670723052821046 0.416147822196104 0.449183376673257 -0.880010191960629 Q99459 CDC5L Q99459.T355.p_CDC5L Q99459_T355t _1_1_355_355 Q99459 Q99459 Cell division cycle 5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3515.3515.3 10.37 7.64 2.3 3 1 1 0 479.9071 1357.7385 T355t TMT10 352 (R) TPRtPASQDR (I) T(0.0)PRT(0.99)PAS(0.0)QDR t:Phosphorylated T CDC5L 92477.2 1 5 751.1 232.35 HUMAN 1 1.7346 -3.8075 VALTRKHSVSPPPPY-p Q9BZD6;S200-p VALTRKHSVSPPPPY 0.376543939091805 0.00979337098678629 -0.126 -0.495666666666667 7.84364400422415 28.2751062645043 -0.126 -0.495666666666667 0.164299257045467 0.00148761097431312 -1.60802482155761 -5.91533665895287 Q9BZD6 PRRG4 Q9BZD6.S200.p_PRRG4 Q9BZD6_S200sS202s_2_2_200_202 Q9BZD6 Q9BZD6 Transmembrane gamma-carboxyglutamic acid protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8642.8642.5 12.93 12.93 12.927 4 2 2 0 496.0603 2316.3431 S200s S202s TMT10 198 (R) KHsVsPPPPYPGHTK (G) KHS(0.99)VS(0.99)PPPPY(0.0)PGHT(0.0)K K:TMT10,s:Phosphorylated S PRRG4 25745 1 5 3095.1 60.78 HUMAN 1 -7.8436 -28.2751 VAMRLAGSLTDVAVE-p Q96HU1-2;S360-p VAMRLAGSLTDVAVE 0.290942379228692 0.321095942492638 0.161 0.0996666666666667 10.1086347175096 6.52295561751086 0.161 0.0996666666666667 0.0975296191355834 0.222691909011603 2.00059050699455 1.37686778130504 Q96HU1 SGSM3 Q96HU1.2.S360.p_SGSM3 Q96HU1-2_S360s _1_1_360_360 Q96HU1-2 Q96HU1-2 Isoform 2 of Small G protein signaling modulator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20302.20302.2 13.35 13.35 2.168 3 1 1 0 884.9575 1688.938 S360s TMT10 357 (R) LAGsLTDVAVETQR (R) LAGS(0.99)LT(0.0)DVAVET(0.0)QR s:Phosphorylated S SGSM3 89276.7 2 2 3188.1 58.17 HUMAN 1 10.1086 6.523 VAMRSLPSNGELDPD-p Q8TDC3-2;S327-p VAMRSLPSNGELDPD 0.90916953958039 0.230776669890078 -0.02 0.128666666666667 0.812054364021749 8.38692175565503 -0.02 0.128666666666667 0.829458312054762 0.14497990953853 -0.226046229242681 1.70165665373021 Q8TDC3 BRSK1 Q8TDC3.2.S327.p_BRSK1 Q8TDC3-2_S327s _1_1_327_327 Q8TDC3-2 Q8TDC3-2|J3KNK0|Q8TDC3-3 Isoform 2 of Serine/threonine-protein kinase BRSK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36088.36088.3 12.28 12.28 2.479 4 1 1 0 935.0984 2723.3218 S327s TMT10 324 (R) SLPsNGELDPDVLESMASLGCFR (D) S(0.0)LPS(0.99)NGELDPDVLES(0.0)MAS(0.0)LGCFR C:Carbamidomethylation,s:Phosphorylated S BRSK1 87322.4 1 4 380.3 335.31 HUMAN 1 -0.8121 8.3869 VANGGTASPEYRAAS-p Q96DR7;S98-p VANGGTASPEYRAAS 0.748586958075957 0.251041386222745 0.046 -0.165333333333333 2.38953579021335 7.90686694772574 0.046 -0.165333333333333 0.576828116247111 0.161924776106635 0.593438189579192 -1.61849354250746 Q96DR7 ARHGEF26 Q96DR7.S98.p_ARHGEF26 Q96DR7_S98s _1_1_98_98 Q96DR7 Q96DR7|Q96DR7-4 Rho guanine nucleotide exchange factor 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4524.4524.3 14.13 14.13 2.949 3 1 1 0 586.6234 1677.887 S98s TMT10 89 (R) RAVANGGTAsPEYR (A) RAVANGGT(0.0)AS(0.99)PEY(0.0)R s:Phosphorylated S ARHGEF26 97914.4 3 2 478.1 300.31 HUMAN 1 2.3895 -7.9069 VAPAVRGSNPHLQTF-p Q9BSJ8-2;S172-p VAPAVRGSNPHLQTF 0.278859043149947 0.266153592436461 0.272666666666667 0.279666666666667 10.4851982349959 7.56918791854188 0.272666666666667 0.279666666666667 0.0894293710700999 0.175017392071602 2.0661466975261 1.55985711688911 Q9BSJ8 ESYT1 Q9BSJ8.2.S172.p_ESYT1 Q9BSJ8-2_S172s _1_1_172_172 Q9BSJ8-2 Q9BSJ8-2 Isoform 2 of Extended synaptotagmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.24072.24072.4 14.66 14.66 2.588 5 1 1 0 734.6392 2855.5729 S172s TMT10 160 (K) LLAETVAPAVRGsNPHLQTFTFTR (V) LLAET(0.0)VAPAVRGS(0.99)NPHLQT(0.0)FT(0.0)FT(0.0)R s:Phosphorylated S ESYT1 124514 1 3 400.1 328.2 HUMAN 1 10.4852 7.5692 VAPLWHSSSEVISMA-p O43166;S1366-p VAPLWHSSSEVISMA 0.769992956522915 0.861293278603821 0.0503333333333333 0.0183333333333334 2.17519778123041 0.914569840593097 0.0503333333333333 0.0183333333333334 0.606010601684189 0.8101081771911 0.547260533004057 0.252285148190116 O43166 SIPA1L1 O43166.S1366.p_SIPA1L1 O43166_S1366s _1_1_1366_1366 O43166 O43166|O43166-2|O43166-3|F5GYF8 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22452.22452.3 18.11 18.11 1.219 4 1 1 0 732.0231 2114.0902 S1366s TMT10 1359 (K) VAPLWHSsSEVISMADR (T) VAPLWHS(0.0)S(0.99)S(0.0)EVIS(0.0)MADR s:Phosphorylated S SIPA1L1 201223.1 4 18 46.1 777.88 HUMAN 1 2.1752 0.9146 VAPSRIRTLPLARSS-p Q8TEH3;T923-p VAPSRIRTLPLARSS 0.942896336607154 0.851472883521578 -0.012 -0.0333333333333333 0.502087085004962 0.981507955894854 -0.012 -0.0333333333333333 0.890822733387776 0.797717655909017 -0.143852200967479 -0.26920698935986 Q8TEH3 DENND1A Q8TEH3.T923.p_DENND1A Q8TEH3_T923t _1_1_923_923 Q8TEH3 Q8TEH3-6|Q8TEH3-7 DENN domain-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14494.14494.3 9.68 9.68 99 1 1 1 0 416.9188 1168.7727 T923t TMT10 921 (R) IRtLPLAR (S) IRT(1.0)LPLAR t:Phosphorylated T DENND1A 111202.8 1 9 882.1 207.04 HUMAN 1 -0.5021 -0.9815 VAPVQEESDLEKKRR-p Q13409-2;S51-p VAPVQEESDLEKKRR 0.49247746581952 0.12703138722142 0.108 0.244333333333333 5.66482766387573 11.812020616515 0.108 0.244333333333333 0.271342132361695 0.065886727659934 1.22461699079803 2.29791053777954 Q13409 DYNC1I2 Q13409.2.S51.p_DYNC1I2 Q13409-2_S51s _1_1_51_51 Q13409-2 Q13409|Q13409-5|Q13409-2|Q13409-7|Q13409-3|Q13409-6|E7EU01 Isoform 2B of Cytoplasmic dynein 1 intermediate chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16115.16115.2 17.76 13.95 99 1 1 1 0 1041.5248 2002.0745 S51s TMT10 42 (K) EAVAPVQEEsDLEK (K) EAVAPVQEES(1.0)DLEK K:TMT10,s:Phosphorylated S DYNC1I2 71042.8 3 3 1616.1 127.25 HUMAN 1 5.6648 11.812 VAPVTNFSDSDDTMV-p Q9NWQ4;S86-p VAPVTNFSDSDDTMV 0.568633177625559 0.10507423810606 -0.0756666666666667 0.176333333333333 4.50997096828771 12.9265265132804 -0.0756666666666667 0.176333333333333 0.353999707492343 0.0509738396771544 -1.01343955016813 2.49647531471354 Q9NWQ4 GPATCH2L Q9NWQ4.S86.p_GPATCH2L Q9NWQ4_S86s _1_1_86_86 Q9NWQ4 Q9NWQ4|Q9NWQ4-4|G3V553|Q9NWQ4-1 G patch domain-containing protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21515.21515.2 19.74 16.78 1.195 4 1 1 0 1232.5909 2384.2056 S86s TMT10 78 (R) EVAPVTNFsDSDDTMVAK (R) EVAPVT(0.0)NFS(0.99)DS(0.0)DDT(0.0)MVAK K:TMT10,s:Phosphorylated S GPATCH2L 55171.4 6 4 2768.1 71.26 HUMAN 1 -4.51 12.9265 VAQGNENYAGIAARD-p Q9Y490;Y1116-p VAQGNENYAGIAARD 0.958853821551284 0.109333006519697 -0.0116666666666667 0.177333333333333 0.353691337262187 12.6976287404017 -0.0116666666666667 0.177333333333333 0.921787609824372 0.0537325097245452 -0.102848028734491 2.45541143277281 Q9Y490 TLN1 Q9Y490.Y1116.p_TLN1 Q9Y490_Y1116y _1_1_1116_1116 Q9Y490 Q9Y490 Talin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.37073.37073.3 19.39 17.91 19.393 3 1 1 0 961.4905 2802.4947 Y1116y TMT10 1097 (K) AVSSAIAQLLGEVAQGNENyAGIAAR (D) AVS(0.0)S(0.0)AIAQLLGEVAQGNENY(0.99)AGIAAR y:Phosphorylated Y TLN1 271930.4 1 12 267.1 395.2 HUMAN 1 -0.3537 12.6976 VAQQKNGSPAGGDAK-p Q92604;S233-p VAQQKNGSPAGGDAK 0.162411251147367 0.0100966658195697 0.318333333333333 -0.524333333333333 15.8098784009735 28.0438340162617 0.318333333333333 -0.520008851650715 0.0262429202046067 0.00156897707646066 3.03176946508572 -5.8498540858003 Q92604 LPGAT1 Q92604.S233.p_LPGAT1 Q92604_S233s_1_1_233_233 Q92604 Q92604 Acyl-CoA:lysophosphatidylglycerol acyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25812.25812.4 21.18 21.18 21.18 1 1 1 0 709.15 2752.6288 N231n S233s TMT10 220 (K) IILNALVAQQKnGsPAGGDAK (E) IILN(0.0)ALVAQQKN(0.99)GS(1.0)PAGGDAK K:TMT10,n:Deamidated,s:Phosphorylated S LPGAT1 43316.8 3 2 4839.1 26.06 HUMAN 1 15.8099 -28.0438 VARRHRMSPFPLTSM-p Q9NQX3-2;S352-p VARRHRMSPFPLTSM 0.44729140130676 0.566084685433363 0.115666666666667 -0.0546666666666667 6.44445121702997 3.33277852352174 0.115666666666667 -0.0546666666666667 0.226753958976375 0.464218183297865 1.36337214374776 -0.787111845831943 Q9NQX3 GPHN Q9NQX3.2.S352.p_GPHN Q9NQX3-2_S352s _1_1_352_352 Q9NQX3-2 F5H039|Q9NQX3-2 Isoform 2 of Gephyrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23801.23801.2 11.15 11.15 11.149 3 1 1 0 781.8634 1482.7534 S352s Hydrogen 351 (R) MsPFPLTSMDK (A) MS(0.99)PFPLT(0.0)S(0.0)MDK K:TMT10-Lys-Only,s:Phosphorylated S GPHN 84130.7 2 6 1469.1 139.8 HUMAN 1 6.4445 -3.3328 VARSNPKSPQKPIVR-p P15056;S151-p VARSNPKSPQKPIVR 0.0511487796737011 0.00401533531336638 -0.575666666666667 -0.603333333333333 28.2980936880354 35.3248936757235 -0.575666666666667 -0.603333333333333 0.00147975777724833 0.000293434134182503 -5.93056863555023 -8.21459051754479 P15056 BRAF P15056.S151.p_BRAF P15056_S151s _1_1_151_151 P15056 P15056 Serine/threonine-protein kinase B-raf HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7937.7937.4 10.36 5.59 1.35 2 1 1 0 530.316 2038.274 S151s TMT10 147 (R) SNPKsPQKPIVR (V) S(0.0)NPKS(0.99)PQKPIVR K:TMT10,s:Phosphorylated S BRAF 85177.1 7 16 441.1 311.96 HUMAN 1 -28.2981 -35.3249 VARSTCRSPKGLELE-p Q9NR48;S730-p VARSTCRSPKGLELE 0.145807621071681 0.0020346511457182 1.12533333333333 -1.16833333333333 17.0445869814382 42.0605928119961 1.12533333333333 -1.16833333333333 0.0197488268387284 6.22215346973348e-05 3.27142175590149 -11.0981651148211 Q9NR48 ASH1L Q9NR48.S730.p_ASH1L Q9NR48_S730s _1_1_730_730 Q9NR48 Q9NR48|Q9NR48-2 Histone-lysine N-methyltransferase ASH1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8317.8317.4 10.94 6.37 1.37 3 1 1 0 518.5255 1991.1108 S730s TMT10 726 (R) STCRsPKGLELER (S) S(0.0)T(0.0)CRS(0.99)PKGLELER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ASH1L 336378.7 1 7 245.1 412 HUMAN 1 17.0446 -42.0606 VARTPKASPPDPKSS-p Q7L590;S196-p VARTPKASPPDPKSS 0.807313814085276 0.00272422972588299 0.0433333333333333 -1.49833333333333 1.78928468595855 38.9267671673536 0.0433333333333333 -1.49833333333333 0.662325584474314 0.000128033401380594 0.461614896171575 -9.65895922694728 Q7L590 MCM10 Q7L590.S196.p_MCM10 Q7L590_S196s _1_1_196_196 Q7L590 Q7L590|Q7L590-2|Q5T670 Protein MCM10 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9204.9204.3 10.78 10.78 2.508 2 1 1 0 602.344 1725.0514 S196s TMT10 192 (R) TPKAsPPDPK (S) T(0.0)PKAS(0.99)PPDPK K:TMT10,s:Phosphorylated S MCM10 99322.4 3 5 1720.1 119.54 HUMAN 1 1.7893 -38.9268 VASDMPHSPTLRVDR-p Q6W2J9;S1127-p VASDMPHSPTLRVDR 0.467693467866994 0.38840732950464 0.237 0.121 6.09451369773093 5.46009646640904 0.237 0.121 0.245781182986562 0.284439792637777 1.30138295927772 1.18748584216444 Q6W2J9 BCOR Q6W2J9.S1127.p_BCOR Q6W2J9_S1127s _1_1_1127_1127 Q6W2J9 Q6W2J9|Q6W2J9-2|Q6W2J9-4 BCL-6 corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16413.16413.3 18.52 18.52 1.105 4 1 1 0 890.0878 2588.2976 S1127s TMT10 1110 (R) QPVSEPPADQVASDMPHsPTLR (V) QPVS(0.0)EPPADQVAS(0.0)DMPHS(0.99)PT(0.0)LR s:Phosphorylated S BCOR 193725.6 3 9 459.1 305.76 HUMAN 1 6.0945 5.4601 VASKTYETPPPSPGL-p A0A0C4DH75;T162-p VASKTYETPPPSPGL 0.472567058699638 0.52229722943594 0.1 0.097 6.00049627958075 3.79109786272137 0.1 0.097 0.25115994081248 0.417724755724329 1.28465199382414 0.876838157658049 A0A0C4DH75 MPP2 A0A0C4DH75.T162.p_MPP2 A0A0C4DH75_T162t _1_1_162_162 A0A0C4DH75 A0A0C4DH75|Q14168|D3DX49|A0A0D9SFF8|Q14168-3|A0A0A0MRU0|Q14168-2|D3DX48|Q14168-6|B4DZ84|Q14168-4 MAGUK p55 subfamily member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22444.22647.3 17.68 15.02 1.209 6 1 1 0 1030.1704 3008.5203 T162t TMT10 159 (K) TYEtPPPSPGLDPTFSNQPVPPDAVR (M) T(0.0)Y(0.0)ET(0.99)PPPS(0.0)PGLDPT(0.0)FS(0.0)NQPVPPDAVR t:Phosphorylated T MPP2 67148.4 3 2 4585.1 29.22 HUMAN 1 6.0005 3.7911 VASMGADSGDDFASD-p Q92805;S41-p VASMGADSGDDFASD 0.30738224176677 0.0665752188304774 -0.195 0.228333333333333 9.57571180314765 15.6498185462863 -0.195 0.228333333333333 0.110262749979017 0.0272281506835011 -1.90808175679528 2.99917492052336 Q92805 GOLGA1 Q92805.S41.p_GOLGA1 Q92805_S41s _1_1_41_41 Q92805 Q92805 Golgin subfamily A member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13747.13747.2 22.51 22.51 4.864 7 1 1 0 1222.4911 2364.0095 S41s TMT10 32 (K) ESVASMGADsGDDFASDGSSSR (E) ES(0.0)VAS(0.0)MGADS(0.99)GDDFAS(0.0)DGS(0.0)S(0.0)S(0.0)R s:Phosphorylated S GOLGA1 88297 8 3 1691.1 120.73 HUMAN 1 -9.5757 15.6498 VASPDKASSPELPVS-p Q969R5;S688-p VASPDKASSPELPVS 0.331415668172862 0.715924416956678 0.138 -0.0386666666666666 8.95968670915634 1.99614612074663 0.138 -0.0386666666666667 0.127066576504026 0.631517497266376 1.80138430214345 -0.507889475592276 Q969R5 L3MBTL2 Q969R5.S688.p_L3MBTL2 Q969R5_S688sS689s_2_2_688_689 Q969R5 Q969R5 Lethal(3)malignant brain tumor-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22517.22517.5 13.8 13.8 1.833 5 2 2 0 917.2678 4422.3698 S688s S689s TMT10 674 (R) VKEEHLDVASPDKAssPELPVSVENIKQETDD (-) VKEEHLDVAS(0.0)PDKAS(0.99)S(0.99)PELPVS(0.0)VENIKQET(0.0)DD K:TMT10,s:Phosphorylated S L3MBTL2 80135.7 6 4 2538.1 79.35 HUMAN 1 8.9597 -1.9961 VASQKGMSVYGLGRQ-p Q15417;S259-p VASQKGMSVYGLGRQ 0.973184341125227 0.0511139572840244 -0.00533333333333334 0.260666666666667 0.229836954175903 17.2451745179089 -0.00533333333333333 0.260666666666667 0.948454070148126 0.0188574319082307 -0.0677020449840579 3.30851444787783 Q15417 CNN3 Q15417.S259.p_CNN3 Q15417_S259s _1_1_259_259 Q15417 Q15417|Q15417-2|Q15417-3 Calponin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17368.17368.2 13.15 13.15 9.803 2 1 1 0 624.8065 1168.6346 S259s TMT10 257 (K) GMsVYGLGR (Q) GMS(0.99)VY(0.0)GLGR s:Phosphorylated S CNN3 36584.2 2 10 1713.1 119.85 HUMAN 1 -0.2298 17.2452 VATVSEKSRIMELEK-p P30622;S510-p VATVSEKSRIMELEK 0.10987120770175 0.457128477442985 -0.288333333333333 -0.128333333333333 20.0686198720376 4.53220619181524 -0.288333333333333 -0.128333333333333 0.00984323860610305 0.352191914058096 -3.89369242881904 -1.01739960964687 P30622 CLIP1 P30622.S510.p_CLIP1 P30622_S510s _1_1_510_510 P30622 P35240-2|P35240-3|P35240-8|P35240-5|P35240-6|P35240-4|P30622|P30622-1|P30622-2|J3KP58|F5H0N7 CAP-Gly domain-containing linker protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15165.15165.3 7.87 7.87 99 1 1 1 0 515.2819 1463.8656 S510s TMT10 510 (K) sRIMELEK (D) S(1.0)RIMELEK K:TMT10,s:Phosphorylated S CLIP1 162985.2 2 11 372.1 339.16 HUMAN 1 -20.0686 -4.5322 VAVFYRASPRHKMKI-p P98194-7;S655-p VAVFYRASPRHKMKI 0.215102413706098 0.302951593008201 0.239666666666667 -0.101 12.8625301124054 6.84836501648457 0.239666666666667 -0.101 0.0517305372429224 0.2066157853518 2.48632484476438 -1.43405569791816 P98194 ATP2C1 P98194.7.S655.p_ATP2C1 P98194-7_S655s _1_1_655_655 P98194-7 P98194-7|P98194-6|B4E2Q0|P98194-2 Isoform 7 of Calcium-transporting ATPase type 2C member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14121.14121.2 7.51 7.51 7.513 2 1 1 0 737.8911 1394.8106 S655s TMT10 648 (K) VAVFYRAsPR (H) VAVFY(0.0)RAS(0.99)PR s:Phosphorylated S ATP2C1 108339.1 1 2 4663.1 28.25 HUMAN 1 12.8625 -6.8484 VAYAADSSDEEEEHG-p Q7Z7F0;S572-p VAYAADSSDEEEEHG 0.148266672319898 0.0152415612815696 0.242666666666667 -0.370333333333333 16.751364182362 25.1348944569051 0.242666666666667 -0.370333333333333 0.0211282526633436 0.00306556517848541 3.21382295279646 -5.07164810490233 Q7Z7F0 KIAA0907 Q7Z7F0.S572.p_KIAA0907 Q7Z7F0_S571sS572s_2_2_571_572 Q7Z7F0 Q7Z7F0 Protein BLOM7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.18872.18872.3 18.82 18.82 6.873 3 2 2 0 975.0923 2763.3262 S571s S572s TMT10 561 (K) GFGLVAYAADssDEEEEHGGHK (N) GFGLVAY(0.0)AADS(0.99)S(0.99)DEEEEHGGHK K:TMT10,s:Phosphorylated S KIAA0907 65072.3 3 4 2285.1 89.64 HUMAN 1 16.7514 -25.1349 VCEENSVSPIGCNSS-p Q5VUA4;S2050-p VCEENSVSPIGCNSS 0.530763566971729 0.0167918788364309 -0.088 0.481333333333333 5.08998272469552 24.4994370898988 -0.088 0.481333333333333 0.309743162011177 0.00354859381295085 -1.12052263475037 4.91213498917498 Q5VUA4 ZNF318 Q5VUA4.S2050.p_ZNF318 Q5VUA4_S2050sS2075s_2_2_2050_2075 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.36339.36339.4 20.03 20.03 1.679 7 2 2 0 1100.9937 4241.0095 S2050s S2075s TMT10 2043 (K) VCEENSVsPIGCNSSDPADFEPIPSFSGFPLDsPK (T) VCEENS(0.0)VS(0.99)PIGCNS(0.0)S(0.0)DPADFEPIPS(0.0)FS(0.0)GFPLDS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF318 252762.4 4 48 37.1 870.88 HUMAN 1 -5.09 24.4994 VCGKSCDSPLNLKTH-p Q8N1G0;S1211-p VCGKSCDSPLNLKTH 0.576683296043079 0.00262293931700471 0.0863333333333333 -0.689333333333333 4.39881370322333 39.2852369883929 0.0863333333333333 -0.689333333333333 0.363177244876303 0.000117889819067172 0.992635990783279 -9.81447041550197 Q8N1G0 ZNF687 Q8N1G0.S1211.p_ZNF687 Q8N1G0_S1211s _1_1_1211_1211 Q8N1G0 Q8N1G0 Zinc finger protein 687 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15392.15392.2 12.14 8.92 2.925 2 1 1 0 786.399 1491.8241 S1211s TMT10 1208 (K) SCDsPLNLK (T) S(0.0)CDS(0.99)PLNLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF687 131979.7 3 22 156.1 501.88 HUMAN 1 4.3988 -39.2852 VCGRSRDSPGYDFSC-p Q12770;S907-p VCGRSRDSPGYDFSC 0.463382860142128 0.729565719784929 -0.101 -0.076 6.1624083019382 1.88721145806802 -0.101 -0.076 0.241968688079376 0.647558270072536 -1.31344411733879 -0.483621747894094 Q12770 SCAP Q12770.S907.p_SCAP Q12770_S907s _1_1_907_907 Q12770 Q12770|Q12770-2|A0A0A0MTG6|Q12770-4 Sterol regulatory element-binding protein cleavage-activating protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17675.17675.3 11.66 11.66 1.295 4 1 1 0 699.3213 2015.9806 S907s TMT10 904 (R) SRDsPGYDFSCLVQR (V) S(0.0)RDS(0.99)PGY(0.0)DFS(0.0)CLVQR C:Carbamidomethylation,s:Phosphorylated S SCAP 141666.3 1 5 1353.1 150.81 HUMAN 1 -6.1624 -1.8872 VCHSNIYSPKETIPE-p P41182;S260-p VCHSNIYSPKETIPE 0.386906109244301 0.428756558690245 0.159666666666667 0.151 7.63373076548232 4.89672220267877 0.159666666666667 0.151 0.172435596395636 0.323837978428951 1.57155039026458 1.08488204586611 P41182 BCL6 P41182.S260.p_BCL6 P41182_S260s _1_1_260_260 P41182 P41182|P41182-2 B-cell lymphoma 6 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16740.16740.5 25.19 25.19 2.289 9 1 1 0 1007.2908 4952.4508 S260s Hydrogen 229 (R) ALPCDSARPVPGEYSRPTLEVSPNVCHSNIYsPKETIPEEAR (S) ALPCDS(0.0)ARPVPGEY(0.0)S(0.0)RPT(0.0)LEVS(0.0)PNVCHS(0.0)NIY(0.0)S(0.99)PKET(0.0)IPEEAR C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S BCL6 80670.9 1 3 557.1 273.04 HUMAN 1 7.6337 4.8967 VCKEKDFSPEALKKA-p B3KS98;S197-p VCKEKDFSPEALKKA 0.547952287657366 0.954702992758899 -0.0823333333333334 -0.00633333333333332 4.82224052681316 0.286921273272836 -0.0823333333333334 -0.00633333333333332 0.329439710262748 0.936069021157754 -1.07137977618557 -0.0840022084678651 B3KS98 NotFound B3KS98.S197.p_NotFound B3KS98_S197s _1_1_197_197 B3KS98 B3KS98|O15372|A0A087WZK9 Eukaryotic translation initiation factor 3 subunit H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16821.16821.3 12.93 9.12 99 1 1 1 0 644.3554 1851.0831 S197s TMT10 193 (K) EKDFsPEALK (K) EKDFS(1.0)PEALK K:TMT10,s:Phosphorylated S EIF3S3 41751.7 14 3 2504.1 80.75 HUMAN 1 -4.8222 -0.2869 VCKLPRLSLNGVRFK-p E9PC69;S749-p VCKLPRLSLNGVRFK 0.113753456802484 0.949548981775588 -0.675333333333333 -0.0116666666666666 19.6974012585604 0.321874255417538 -0.675333333333333 -0.0116666666666666 0.0107216067532918 0.928565565515118 -3.81430826866551 -0.093893926833536 E9PC69 NotFound E9PC69.S749.p_NotFound E9PC69_S749s _1_1_749_749 E9PC69 P27448-7|Q9P0L2-3|Q7KZI7-6|A0A0A0MT23|P27448-2|B4DIB3|Q7KZI7-8|E9PC69|J3KNR0|Q7KZI7-11|A0A0A0MSZ1|Q7KZI7-3|Q7KZI7-14|P27448-4|Q7KZI7-12|Q7KZI7-9|P27448-3|Q7KZI7-4|Q7KZI7-16|Q7KZI7-5|P27448-6|A0A0A0MQR8|P27448-8|A0A0A0MST9|Q9P0L2-2 Non-specific serine/threonine protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19903.19903.3 8.57 8.57 99 1 1 1 0 478.6115 1353.8528 S749s TMT10 745 (K) LPRLsLNGVR (F) LPRLS(1.0)LNGVR s:Phosphorylated S MARK2 87089.2 1 20 200.1 451.67 HUMAN 1 -19.6974 -0.3219 VCMMNENSIDYISRF-p Q96RY5;S1229-p VCMMNENSIDYISRF 0.864901984525087 0.0367795386903921 0.0393333333333333 0.313333333333333 1.2257784111768 19.2954206345485 0.0393333333333333 0.313333333333333 0.754088224130122 0.0117613706478411 0.329591562052237 3.72601416076287 Q96RY5 CRAMP1 Q96RY5.S1229.p_CRAMP1 Q96RY5_S1229s _1_1_1229_1229 Q96RY5 Q96RY5 Protein cramped-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.37179.37179.3 11.98 11.98 1.154 5 1 1 0 1123.1857 3287.5795 S1229s TMT10 1209 (R) SLADVAEVVDSQLVCMMNENsIDYISR (F) S(0.0)LADVAEVVDS(0.0)QLVCMMNENS(0.99)IDY(0.0)IS(0.0)R C:Carbamidomethylation,s:Phosphorylated S CRAMP1 135914.1 2 11 647.1 254.68 HUMAN 1 1.2258 19.2954 VCNGGIMTPPKSTEK-p O96020;T392-p VCNGGIMTPPKSTEK 0.177952626351024 0.00948016479937931 -0.218666666666667 -0.467 14.8333428920659 28.562681520511 -0.218666666666667 -0.467 0.0328598601520478 0.00139229687365307 -2.8472525434931 -5.99754733476516 O96020 CCNE2 O96020.T392.p_CCNE2 O96020_T392t _1_1_392_392 O96020 O96020|O96020-2 G1/S-specific cyclin-E2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19470.19470.3 16 16 7.35 2 1 1 0 751.0513 2171.1717 T392t TMT10 379 (K) GGQLSPVCNGGIMtPPK (S) GGQLS(0.0)PVCNGGIMT(0.99)PPK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CCNE2 47327 3 5 1638.1 124.86 HUMAN 1 -14.8333 -28.5627 VCPKVVSTPPSVTEP-p Q92667;T70-p VCPKVVSTPPSVTEP 0.43606840550564 0.225906374560103 0.117333333333333 0.185 6.63482161299219 8.50831779778053 0.117333333333333 0.185 0.217029034668808 0.140983478001719 1.39692671946293 1.72266384160059 Q92667 AKAP1 Q92667.T70.p_AKAP1 Q92667_T70t _1_1_70_70 Q92667 Q92667|Q92667-2 A-kinase anchor protein 1, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16967.16967.2 15.41 11.05 1.102 4 1 1 0 1003.0359 1925.0996 T70t TMT10 67 (K) VVStPPSVTEPPEK (E) VVS(0.0)T(0.99)PPS(0.0)VT(0.0)EPPEK K:TMT10,t:Phosphorylated T AKAP1 98309.7 3 1 1004.1 189.36 HUMAN 1 6.6348 8.5083 VCPVPTNSPSPPPLP-p Q9ULJ3;S981-p VCPVPTNSPSPPPLP 0.396983707912819 0.0816277284164429 -0.118 0.223333333333333 7.40387723029774 14.4243851391343 -0.118 0.223333333333333 0.181807701784641 0.0361045125634577 -1.53154085885386 2.76945226342382 Q9ULJ3 ZBTB21 Q9ULJ3.S981.p_ZBTB21 Q9ULJ3_S981sS983s_2_2_981_983 Q9ULJ3 Q9ULJ3|Q9ULJ3-2 Zinc finger and BTB domain-containing protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.28388.28388.3 18.32 7.8 1.129 4 2 2 0 1083.5431 3088.6793 S981s S983s TMT10 971 (K) ESEVCPVPTNsPsPPPLPPPPPLPK (I) ES(0.0)EVCPVPT(0.0)NS(0.99)PS(0.99)PPPLPPPPPLPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZBTB21 120636.9 5 15 692.1 242.92 HUMAN 1 -7.4039 14.4244 VCPYLVDTGMFRGCR-p Q8IZV5;T248-p VCPYLVDTGMFRGCR 0.754219877579276 0.030885571757069 -0.0503333333333333 0.428333333333333 2.34069076618188 20.4106949365931 -0.0503333333333334 0.428333333333333 0.583352311914172 0.00909767684450181 -0.582995080813363 3.9638428105853 Q8IZV5 RDH10 Q8IZV5.T248.p_RDH10 Q8IZV5_T248t _1_1_248_248 Q8IZV5 Q8IZV5|E5RK48 Retinol dehydrogenase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30312.30312.3 16.68 16.68 6.714 4 1 1 0 694.6719 2002.0339 T248t TMT10 238 (K) TTLVCPYLVDtGMFR (G) T(0.0)T(0.0)LVCPY(0.0)LVDT(0.99)GMFR C:Carbamidomethylation,t:Phosphorylated T RDH10 38771.4 1 1 5741.1 16.68 HUMAN 1 -2.3407 20.4107 VCQLPDQSPPRNSMP-p Q7Z2Z1;S1750-p VCQLPDQSPPRNSMP 0.705165098884978 0.066824799543146 0.064 -0.241 2.85287135192846 15.6293536136556 0.064 -0.241 0.518457145980304 0.0273567586294031 0.690367032107963 -2.99528550516412 Q7Z2Z1 TICRR Q7Z2Z1.S1750.p_TICRR Q7Z2Z1_S1750s _1_1_1750_1750 Q7Z2Z1 Q7Z2Z1|Q7Z2Z1-2 Treslin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32146.32146.3 25.78 25.78 17.98 2 1 1 0 950.46 2769.3967 S1750s TMT10 1732 (R) TPILEDFELEGVCQLPDQsPPR (N) T(0.0)PILEDFELEGVCQLPDQS(0.99)PPR C:Carbamidomethylation,s:Phosphorylated S TICRR 212850 4 23 238.1 417.32 HUMAN 1 2.8529 -15.6294 VCQRVFQTEAELQEV-p Q92878-2;T696-p VCQRVFQTEAELQEV 0.428106595253249 0.00479058894453536 0.115333333333333 0.934666666666667 6.78384413740797 33.9071662207857 0.115333333333333 0.934666666666667 0.209708283874606 0.000406708620702157 1.42312065635257 7.70043938955144 Q92878 RAD50 Q92878.2.T696.p_RAD50 Q92878-2_T696t _1_1_696_696 Q92878-2 Q92878-2|Q92878-3 Isoform 2 of DNA repair protein RAD50 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36628.36628.2 26.35 26.35 15.07 3 1 1 0 1301.6731 2522.3754 T696t TMT10 693 (R) VFQtEAELQEVISDLQSK (L) VFQT(0.99)EAELQEVIS(0.0)DLQS(0.0)K K:TMT10,t:Phosphorylated T RAD50 155611.3 3 5 1263.1 160.86 HUMAN 1 6.7838 33.9072 VCQTLGISPEEKFVI-p A6NHR9;S67-p VCQTLGISPEEKFVI 0.64513053578444 0.45866001477838 -0.0676666666666667 -0.0736666666666667 3.56351434527142 4.51252226342646 -0.0676666666666667 -0.0736666666666667 0.440198507231743 0.353791808810906 -0.832717870526872 -1.01372759545483 A6NHR9 SMCHD1 A6NHR9.S67.p_SMCHD1 A6NHR9_S67s _1_1_67_67 A6NHR9 A6NHR9|A6NHR9-2 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18804.18804.3 7.1 7.1 1.336 2 1 1 0 710.6909 2050.0713 S67s TMT10 58 (R) ACVCQTLGIsPEEK (F) ACVCQT(0.0)LGIS(0.99)PEEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SMCHD1 228081 1 1 2211.1 93.37 HUMAN 1 -3.5635 -4.5125 VCRKRKGTEVQVDDI-p Q9Y230;T419-p VCRKRKGTEVQVDDI 0.374424883409106 0.0900258561704214 -0.260666666666667 0.253666666666667 7.89932765617904 13.8383230037173 -0.260666666666667 0.253666666666667 0.162206119389656 0.0413207028050929 -1.61769167185186 2.66170765690515 Q9Y230 RUVBL2 Q9Y230.T419.p_RUVBL2 Q9Y230_T419t _1_1_419_419 Q9Y230 Q9Y230|Q9Y230-2 RuvB-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10308.10308.4 10.99 9.2 99 1 1 1 0 539.5575 2075.2428 T419t TMT10 416 (K) RKGtEVQVDDIK (R) RKGT(1.0)EVQVDDIK K:TMT10,t:Phosphorylated T RUVBL2 51326.8 2 5 1680.1 121.4 HUMAN 1 -7.8993 13.8383 VCRKTYVTPRRPFEK-p P46781;T15-p VCRKTYVTPRRPFEK 0.46037124209973 0.0458956443964965 0.199666666666667 -0.531 6.21002972219613 17.9051716227107 0.199666666666667 -0.531 0.239329937711441 0.0161987997888671 1.32189365265979 -3.44030144516018 P46781 RPS9 P46781.T15.p_RPS9 P46781_T15t _1_1_15_15 P46781 P46781|C9JM19|B5MCT8|A8MXK4|F2Z3C0 40S ribosomal protein S9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7380.7380.3 7.07 2.25 3.919 3 1 1 0 468.2675 1322.8196 T15t TMT10 11 (R) KTYVtPR (R) KT(0.0)Y(0.0)VT(0.99)PR K:TMT10,t:Phosphorylated T RPS9 22648.1 1 1 3125.1 60.11 HUMAN 1 6.21 -17.9052 VCVDNKGSPKSPKSD-p Q12955;S1973-p VCVDNKGSPKSPKSD 0.0926681628012438 0.00697607503650515 0.368666666666667 0.627666666666667 21.9873743100045 30.9120914012881 0.368666666666667 0.627666666666667 0.00632794315258581 0.000810570623077214 4.31904272298314 6.70344840948311 Q12955 ANK3 Q12955.S1973.p_ANK3 Q12955_S1973s _1_1_1973_1973 Q12955 Q12955 Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9538.9538.3 13.2 8.24 99 1 1 1 0 662.6824 1906.0671 S1973s TMT10 1965 (K) DVCVDNKGsPK (S) DVCVDNKGS(1.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANK3 482683.6 2 21 135.1 530.51 HUMAN 1 21.9874 30.9121 VDAIYQPSPLEPVIS-p Q96SU4-6;S217-p VDAIYQPSPLEPVIS 0.411787607643824 0.144059600704972 -0.142666666666667 -0.169666666666667 7.1087578757198 11.0835037178505 -0.142666666666667 -0.169666666666667 0.194591655302137 0.0779201227834085 -1.48003759883054 -2.16975818090668 Q96SU4 OSBPL9 Q96SU4.6.S217.p_OSBPL9 Q96SU4-6_S217s _1_1_217_217 Q96SU4-6 Q96SU4-6|Q96SU4-2|Q96SU4-3|Q96SU4-5 Isoform 6 of Oxysterol-binding protein-related protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.36836.36836.5 23.24 19.68 1.298 8 1 1 0 917.6841 4504.4123 S217s TMT10 205 (K) STINPVDAIYQPsPLEPVISTMPSQTVLPPEPVQLCK (S) S(0.0)T(0.0)INPVDAIY(0.0)QPS(0.99)PLEPVIS(0.0)T(0.0)MPS(0.0)QT(0.0)VLPPEPVQLCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S OSBPL9 84938.2 3 1 4169.1 36.27 HUMAN 1 -7.1088 -11.0835 VDALDDLTPPSTAES-p Q86X29-6;T345-p VDALDDLTPPSTAES 0.625942380562294 0.898513763333877 0.0746666666666667 0.0163333333333334 3.77951982691722 0.65181114562914 0.0746666666666667 0.0163333333333334 0.418839871143631 0.860634765362376 0.874742829971268 0.184086325098728 Q86X29 LSR Q86X29.6.T345.p_LSR Q86X29-6_T345t _1_1_345_345 Q86X29-6 Q86X29|Q86X29-4|Q86X29-3|S4R3V8|Q86X29-2|Q86X29-5|Q86X29-6 Isoform 6 of Lipolysis-stimulated lipoprotein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18585.18585.3 16.66 16.66 7.855 6 1 1 0 743.0155 2147.0665 T345t TMT10 337 (R) SVDALDDLtPPSTAESGSR (S) S(0.0)VDALDDLT(0.99)PPS(0.0)T(0.0)AES(0.0)GS(0.0)R t:Phosphorylated T LSR 54725.6 1 10 206.1 448.79 HUMAN 1 3.7795 0.6518 VDANASESP______-p Q9H8Y8-3;S463-p VDANASESP______ 0.834918238854484 0.050124945718593 0.0313333333333333 -0.300666666666667 1.51179519941412 17.3753613229359 0.0313333333333333 -0.300666666666667 0.706025651215081 0.0183005384374202 0.39774951428134 -3.33432385250493 Q9H8Y8 GORASP2 Q9H8Y8.3.S463.p_GORASP2 Q9H8Y8-3_S463s _1_1_463_463 Q9H8Y8-3 Q9H8Y8-3|Q9H8Y8-2 Isoform 3 of Golgi reassembly-stacking protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.17205.17205.3 25.06 25.06 2.345 8 1 1 0 1241.2795 3641.8547 S463s TMT10 433 (K) APTTVEDRVGDSTPVSEKPVSAAVDANASEsP (-) APT(0.0)T(0.0)VEDRVGDS(0.0)T(0.0)PVS(0.0)EKPVS(0.0)AAVDANAS(0.0)ES(0.99)P K:TMT10,s:Phosphorylated S GORASP2 48958.5 21 9 992.1 191.2 HUMAN 1 1.5118 -17.3754 VDARQLPSPEPCEIQ-p Q5VVJ2;S340-p VDARQLPSPEPCEIQ 0.437633728960263 0.0231879799180866 0.111333333333333 0.382333333333333 6.61186060941755 22.3149777842417 0.111333333333333 0.382333333333333 0.218179498446776 0.0058681637139242 1.39288533489887 4.38960294970477 Q5VVJ2 MYSM1 Q5VVJ2.S340.p_MYSM1 Q5VVJ2_S340s _1_1_340_340 Q5VVJ2 Q5VVJ2|Q5VVJ2-2 Histone H2A deubiquitinase MYSM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16877.16877.2 13.82 10.59 99 1 1 1 0 982.5008 1884.0301 S340s TMT10 337 (R) QLPsPEPCEIQK (N) QLPS(1.0)PEPCEIQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MYSM1 96171.6 3 3 2993.1 63.85 HUMAN 1 6.6119 22.315 VDASEEKTPEQIMQE-p Q9H3R5;T68-p VDASEEKTPEQIMQE 0.633201090503624 0.178428239174043 0.0676666666666667 0.136333333333333 3.69813678997023 9.84837169004438 0.0676666666666667 0.136333333333333 0.426762569194707 0.10355303475993 0.858969695735235 1.95460213571041 Q9H3R5 CENPH Q9H3R5.T68.p_CENPH Q9H3R5_T68t _1_1_68_68 Q9H3R5 Q9H3R5|B3KVZ3|D6RBJ6 Centromere protein H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18675.18675.4 17.42 16.49 2.412 3 1 1 0 712.6106 2767.4461 T68t TMT10 59 (K) SMVDASEEKtPEQIMQEK (Q) S(0.0)MVDAS(0.0)EEKT(0.99)PEQIMQEK K:TMT10,t:Phosphorylated T CENPH 28537.5 2 2 4216.1 35.24 HUMAN 1 3.6981 9.8484 VDATAGWSAAGKSVP-p Q10570;S431-p VDATAGWSAAGKSVP 0.683123990240323 0.582240795727962 0.055 0.110666666666667 3.10320248578637 3.17041954340603 0.055 0.110666666666667 0.48941778978927 0.481901242059083 0.741297057363269 0.754709455932539 Q10570 CPSF1 Q10570.S431.p_CPSF1 Q10570_S431s _1_1_431_431 Q10570 Q10570 Cleavage and polyadenylation specificity factor subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12958.12958.3 8.4 8.4 5.853 2 1 1 0 609.988 1747.9855 S431s TMT10 423 (K) RVDATAGWsAAGK (S) RVDAT(0.0)AGWS(0.99)AAGK K:TMT10,s:Phosphorylated S CPSF1 162136.1 1 1 2017.1 102.14 HUMAN 1 3.1032 3.1704 VDCPGPGSGAEGSGP-p O00268;S1027-p VDCPGPGSGAEGSGP 0.259411432378501 0.73338590057908 0.272666666666667 -0.0706666666666667 11.1290207628663 1.8574090057839 0.272666666666667 -0.0706666666666667 0.0771077310190094 0.652017270551038 2.17872823919804 -0.476933500352075 O00268 TAF4 O00268.S1027.p_TAF4 O00268_S1027s _1_1_1027_1027 O00268 O00268 Transcription initiation factor TFIID subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13774.13774.4 13.81 9.69 2.236 6 1 1 0 812.6499 3167.6155 S1027s TMT10 1019 (R) KVDCPGPGsGAEGSGPGSVVPGSSGVGTPR (Q) KVDCPGPGS(0.99)GAEGS(0.0)GPGS(0.0)VVPGS(0.0)S(0.0)GVGT(0.0)PR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TAF4 110397.6 1 7 1541.1 133.04 HUMAN 1 11.129 -1.8574 VDDGGWNTVPISKGS-p Q04637-9;T1061-p VDDGGWNTVPISKGS 0.0224122716392434 0.00349465896007896 0.698 0.899333333333333 38.2088355201 36.7178982086415 0.698 0.899333333333334 0.000151048510836694 0.000212916921950793 9.37458787104285 8.74867227237443 Q04637 EIF4G1 Q04637.9.T1061.p_EIF4G1 Q04637-9_T1061t _1_1_1061_1061 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30335.30335.3 17.58 11.47 5.774 2 1 1 0 769.4109 2226.2534 T1061t TMT10 1050 (R) GLPLVDDGGWNtVPISK (G) GLPLVDDGGWNT(0.99)VPIS(0.0)K K:TMT10,t:Phosphorylated T EIF4G1 176975.4 1 15 107.1 585.61 HUMAN 1 38.2088 36.7179 VDDQKAGSPSRDVGP-p Q8TEW0;S873-p VDDQKAGSPSRDVGP 0.307533175710051 0.00259997565261951 0.234666666666667 -0.781333333333333 9.56937473375881 39.4456299628589 0.234666666666667 -0.781333333333333 0.110423758871589 0.000113615348175599 1.90698317395452 -9.88478505559054 Q8TEW0 PARD3 Q8TEW0.S873.p_PARD3 Q8TEW0_S873s _1_1_873_873 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11|Q8TEW0-4|Q8TEW0-10|Q8TEW0-9|F5GZI3 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16864.16864.4 13.8 8.48 2.862 4 1 1 0 870.4936 3398.9777 S873s TMT10 863 (K) LNTVDDQKAGsPSRDVGPSLGLKK (S) LNT(0.0)VDDQKAGS(0.99)PS(0.0)RDVGPS(0.0)LGLKK K:TMT10,s:Phosphorylated S PARD3 151933.9 13 17 65.1 692.2 HUMAN 1 9.5694 -39.4456 VDEAAAESPSFLSLR-p O43639;S176-p VDEAAAESPSFLSLR 0.594137318038591 0.219868751452172 -0.0703333333333333 0.424333333333333 4.17047970064624 8.66056824172043 -0.0703333333333333 0.424333333333333 0.382782460685399 0.136126655930499 -0.949579871264353 1.74900293200648 O43639 NCK2 O43639.S176.p_NCK2 O43639_S176s _1_1_176_176 O43639 O43639 Cytoplasmic protein NCK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.36885.36885.4 27.27 27.27 3.084 7 1 1 0 1075.5331 4219.1388 S176s TMT10 151 (R) GSYNGQIGWFPSNYVLEEVDEAAAEsPSFLSLRK (G) GS(0.0)Y(0.0)NGQIGWFPS(0.0)NY(0.0)VLEEVDEAAAES(0.99)PS(0.0)FLS(0.0)LRK K:TMT10,s:Phosphorylated S NCK2 43142.5 1 4 2561.1 78.45 HUMAN 1 -4.1705 8.6606 VDEALRRSDLVEEFW-p Q7RTP6;S1321-p VDEALRRSDLVEEFW 0.326802591871946 0.0209167488563846 -0.147666666666667 -0.385666666666667 9.08862415889935 22.9706000689359 -0.147666666666667 -0.385666666666667 0.123349554164079 0.00504591572835227 -1.82370537976528 -4.54240169694071 Q7RTP6 MICAL3 Q7RTP6.S1321.p_MICAL3 Q7RTP6_S1310sS1321s_2_2_1310_1321 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30991.30991.4 8.25 6.92 99 2 2 2 0 888.4429 3390.8244 S1310s S1321s TMT10 1306 (K) DRLGsPLAVDEALRRsDLVEEFWMK (S) DRLGS(1.0)PLAVDEALRRS(1.0)DLVEEFWMK K:TMT10,s:Phosphorylated S MICAL3 225431.9 1 25 190.1 466.81 HUMAN 1 -9.0886 -22.9706 VDEEDEDSPSECHTP-p O15033;S337-p VDEEDEDSPSECHTP 0.128918631797654 0.668346430610979 0.267333333333333 0.0566666666666667 18.4264096010484 2.39532995760151 0.267333333333333 0.0566666666666667 0.0143667667173855 0.576059050496649 3.54908229633219 0.594599607981441 O15033 AREL1 O15033.S337.p_AREL1 O15033_S337sT343t_2_2_337_343 O15033 O15033|O15033-2|G3V2B5 Apoptosis-resistant E3 ubiquitin protein ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7858.7858.4 17.92 17.92 1.281 5 2 2 0 784.0828 2973.3784 S337s T343t TMT10 325 (R) RPSTAVDEEDEDsPSECHtPEK (V) RPS(0.0)T(0.0)AVDEEDEDS(0.99)PS(0.0)ECHT(0.99)PEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T AREL1 95247.9 2 1 5585.1 17.92 HUMAN 1 18.4264 2.3953 VDEETAESDTSPVLE-p Q99590;S413-p VDEETAESDTSPVLE 0.367667871349549 0.0374948685650258 0.195333333333333 0.348 8.06351030797309 19.1611932556294 0.195333333333333 0.348 0.156188469482671 0.0121305550886225 1.64617619811646 3.69792439017588 Q99590 SCAF11 Q99590.S413.p_SCAF11 Q99590_S413s _1_1_413_413 Q99590 Q99590|F8VXG7|Q99590-2|A0A0A0MTP7 Protein SCAF11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15941.15941.3 20.45 20.45 1.125 8 1 1 0 955.4353 2784.3311 S413s TMT10 400 (K) SSSNDSVDEETAEsDTSPVLEK (E) S(0.0)S(0.0)S(0.0)NDS(0.0)VDEET(0.0)AES(0.99)DT(0.0)S(0.0)PVLEK K:TMT10,s:Phosphorylated S SCAF11 166418 2 4 120.1 549.85 HUMAN 1 8.0635 19.1612 VDEGEECSDSEGSHN-p Q6Y7W6-5;S329-p VDEGEECSDSEGSHN 0.203968533214827 0.0045642445280084 -0.453333333333333 0.629333333333333 13.3746790694452 34.273416997565 -0.453333333333333 0.629333333333334 0.0459760962227329 0.000373816356532546 -2.57880639043619 7.83052677161959 Q6Y7W6 GIGYF2 Q6Y7W6.5.S329.p_GIGYF2 Q6Y7W6-5_S329s _1_1_329_329 Q6Y7W6-5 I1E4Y6|Q6Y7W6-3|Q6Y7W6-5|Q6Y7W6-4 Isoform 4 of GRB10-interacting GYF protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16811.16811.5 20.69 17.52 2.244 3 1 1 0 989.2408 4862.2136 S329s TMT10 309 (K) EPIPEEQEMDFRPVDEGEECsDSEGSHNEEAKEPDK (T) EPIPEEQEMDFRPVDEGEECS(0.99)DS(0.0)EGS(0.0)HNEEAKEPDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GIGYF2 149826.1 1 10 470.1 302.35 HUMAN 1 -13.3747 34.2734 VDEIVVLSGDNSKVT-p J3QLD9;S385-p VDEIVVLSGDNSKVT 0.941601783060378 0.57965968635587 -0.0143333333333333 -0.0636666666666666 0.513569770252549 3.19583355752544 -0.0143333333333333 -0.0636666666666666 0.888470521540903 0.47908949065827 -0.146977710605527 -0.759804506967046 J3QLD9 FLOT2 J3QLD9.S385.p_FLOT2 J3QLD9_S385s _1_1_385_385 J3QLD9 E7EMK3|Q14254|J3QLD9 Flotillin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28614.28614.4 19.14 17.39 3.64 3 1 1 0 709.9067 2756.6377 S385s TMT10 371 (K) IAAPLTKVDEIVVLsGDNSK (V) IAAPLT(0.0)KVDEIVVLS(0.99)GDNS(0.0)K K:TMT10,s:Phosphorylated S FLOT2 47597.9 1 1 4519.1 30.39 HUMAN 1 -0.5136 -3.1958 VDELSLYSVPEGQSK-p Q9BUR5;S44-p VDELSLYSVPEGQSK 0.27136228544952 0.167422542760629 0.208666666666667 0.142666666666667 10.7362923004928 10.2102618828157 0.208666666666667 0.142666666666667 0.0844055044829877 0.0952738711435697 2.10997148351757 2.01742973027955 Q9BUR5 APOO Q9BUR5.S44.p_APOO Q9BUR5_S44s _1_1_44_44 Q9BUR5 Q9BUR5|Q9BUR5-2|G3V1B6 MICOS complex subunit MIC26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20866.20866.3 14.17 14.17 3.149 5 1 1 0 949.512 2766.5492 S44s TMT10 33 (K) NSVKVDELSLYsVPEGQSK (Y) NS(0.0)VKVDELS(0.0)LY(0.0)S(0.99)VPEGQS(0.0)K K:TMT10,s:Phosphorylated S APOO 22398.3 1 1 6075.1 14.17 HUMAN 1 10.7363 10.2103 VDENKNESKLEREHK-p Q8NFC6;S648-p VDENKNESKLEREHK 0.51428507339171 0.0955876725450255 0.0926666666666667 -0.198333333333333 5.3350773914428 13.485069613322 0.0926666666666667 -0.198333333333333 0.292746870330035 0.0448221865363977 1.16512367539045 -2.59736317955598 Q8NFC6 BOD1L1 Q8NFC6.S648.p_BOD1L1 Q8NFC6_S648s_1_1_648_648 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.5399.5399.3 8.22 0.62 99 1 1 1 0 655.6817 1884.0816 N646n S648s Hydrogen 646 (K) nEsKLEREHKR (R) N(1.0)ES(1.0)KLEREHKR K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S BOD1L1 332628.7 1 6 97.1 603.4 HUMAN 1 5.3351 -13.4851 VDEPVVITPRAEDCG-p A0A0J9YWL0;T397-p VDEPVVITPRAEDCG 0.212087105290786 0.0710171265246076 -0.253666666666667 -0.434666666666667 13.0022195256451 15.2712012147764 -0.253666666666667 -0.434666666666667 0.0500931159981584 0.0297084421251553 -2.51146687697753 -2.92751879974195 A0A0J9YWL0 NotFound A0A0J9YWL0.T397.p_NotFound A0A0J9YWL0_T397t _1_1_397_397 A0A0J9YWL0 A0A0J9YWL0 Beta/gamma crystallin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15921.15933.3 19.47 19.47 15.406 2 1 1 0 640.6622 1840.0014 T397t TMT10 385 (K) TEGAQVDEPVVItPR (A) T(0.0)EGAQVDEPVVIT(0.99)PR t:Phosphorylated T CRYBG1 233643.7 2 10 79.1 640.71 HUMAN 1 -13.0022 -15.2712 VDEQSDSSEESEEEK-p P35269;S308-p VDEQSDSSEESEEEK 0.108727233162321 0.00488322175391975 -0.4925 1.4965 20.1903103480175 33.7596558649928 -0.4925 1.4965 0.00957125672390209 0.000420759968089162 -3.91991257285749 7.64857129040358 P35269 GTF2F1 P35269.S308.p_GTF2F1 P35269_S307sS308s_2_2_307_308 P35269 P35269 General transcription factor IIF subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11626.11626.5 13.84 13.84 1.176 4 2 2 0 866.59 4168.9711 S307s S308s TMT10 300 (K) GVDEQSDssEESEEEKPPEEDKEEEEEK (K) GVDEQS(0.0)DS(0.99)S(0.99)EES(0.0)EEEKPPEEDKEEEEEK K:TMT10,s:Phosphorylated S GTF2F1 58296.5 3 13 1159.1 171.17 HUMAN 2 -20.1903 33.7597 VDERPCRTPPLQQSP-p Q6IQ26;T1079-p VDERPCRTPPLQQSP 0.499914243414761 0.0617551139191631 0.091 0.221666666666667 5.55008231809694 16.0996845643695 0.091 0.221666666666667 0.278606835975735 0.0245488721193494 1.20397694519162 3.08515741292142 Q6IQ26 DENND5A Q6IQ26.T1079.p_DENND5A Q6IQ26_T1079tS1085s_2_2_1079_1085 Q6IQ26 Q6IQ26|Q6IQ26-2 DENN domain-containing protein 5A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29013.29013.4 17.06 17.06 1.101 5 2 2 0 976.7458 3744.0316 T1079t S1085s TMT10 1060 (R) ILVGELLTSQPEVDERPCRtPPLQQsPSVIR (R) ILVGELLT(0.0)S(0.0)QPEVDERPCRT(0.99)PPLQQS(0.99)PS(0.0)VIR C:Carbamidomethylation,t:Phosphorylated T,s:Phosphorylated S DENND5A 148633.4 5 6 2138.1 96.07 HUMAN 1 5.5501 16.0997 VDGERERSPRSEPPI-p Q7Z6E9;S1052-p VDGERERSPRSEPPI 0.551277990031512 0.0930146168428679 -0.082 0.210333333333333 4.77243325329114 13.6420909072898 -0.082 0.210333333333333 0.333239653844365 0.043230564771782 -1.06218537471336 2.62591085800642 Q7Z6E9 RBBP6 Q7Z6E9.S1052.p_RBBP6 Q7Z6E9_S1052s _1_1_1052_1052 Q7Z6E9 Q7Z6E9|Q7Z6E9-2 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5643.5643.4 15.76 6.97 3.709 2 1 1 0 459.2557 1754.0325 S1052s TMT10 1050 (R) ERsPRSEPPIK (K) ERS(0.99)PRS(0.0)EPPIK K:TMT10,s:Phosphorylated S RBBP6 202473.6 17 13 27.1 935.6 HUMAN 1 -4.7724 13.6421 VDGIPNDSSDSEMED-p Q9H6S0;S1089-p VDGIPNDSSDSEMED 0.362971528924294 0.0422490148223621 -0.224333333333333 0.274666666666667 8.17350676434326 18.4078759841507 -0.224333333333333 0.274666666666667 0.152282263531345 0.0144282082330644 -1.66524668993068 3.54230382402995 Q9H6S0 YTHDC2 Q9H6S0.S1089.p_YTHDC2 Q9H6S0_S1089sS1090s_2_2_1089_1090 Q9H6S0 Q9H6S0 Probable ATP-dependent RNA helicase YTHDC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25038.25038.4 12.34 12.34 1.144 6 2 2 0 939.9261 3596.7427 S1089s S1090s TMT10 1069 (R) LASNALQEPSSFRVDGIPNDssDSEMEDK (T) LAS(0.0)NALQEPS(0.0)S(0.0)FRVDGIPNDS(0.99)S(0.99)DS(0.0)EMEDK K:TMT10,s:Phosphorylated S YTHDC2 161671.9 4 18 668.1 249.65 HUMAN 1 -8.1735 18.4079 VDGPRSPSYGRSRSR-p J3KTL2;S201-p VDGPRSPSYGRSRSR 0.329558461500734 0.15295985410381 0.221 0.217666666666667 9.01056809387273 10.7236767256488 0.221 0.217666666666667 0.125586567510974 0.08465104571723 1.81019230435603 2.10684480857401 J3KTL2 NotFound J3KTL2.S201.p_NotFound J3KTL2_S199sS201s_2_2_199_201 J3KTL2 J3KTL2|Q07955 Serine/arginine-rich-splicing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6777.6777.3 8.97 8.97 1.991 3 2 2 0 527.2339 1419.7542 S199s S201s TMT10 194 (K) VDGPRsPsYGR (S) VDGPRS(0.99)PS(0.99)Y(0.0)GR s:Phosphorylated S SRSF1 28442.8 6 94 8.5 1346.57 HUMAN 1 9.0106 10.7237 VDGQSVGTPVGPETG-p Q3T8J9-3;T1444-p VDGQSVGTPVGPETG 0.885585284476882 0.0456974269541524 0.0213333333333333 0.249 1.04096107829287 17.9290926836336 0.0213333333333333 0.249 0.786871638522117 0.0161098216209008 0.284121756746746 3.44512279053783 Q3T8J9 GON4L Q3T8J9.3.T1444.p_GON4L Q3T8J9-3_T1444t _1_1_1444_1444 Q3T8J9-3 Q3T8J9|Q3T8J9-3|A0A087WUE6|Q3T8J9-2 Isoform 3 of GON-4-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15524.15524.4 21.76 21.76 2.842 8 1 1 0 938.2259 3669.9062 T1444t TMT10 1424 (R) LSSPPGKPEDSSSVDGQSVGtPVGPETGGEK (N) LS(0.0)S(0.0)PPGKPEDS(0.0)S(0.0)S(0.0)VDGQS(0.0)VGT(0.99)PVGPET(0.0)GGEK K:TMT10,t:Phosphorylated T GON4L 250541.8 1 17 291.1 381.52 HUMAN 1 1.041 17.9291 VDINEMESPLATRNR-p P49902;S502-p VDINEMESPLATRNR 0.379106952492942 0.831870513320841 0.249333333333333 -0.0253333333333333 7.78364248042412 1.11888499389782 0.249333333333333 -0.0253333333333333 0.16658494583578 0.772878988301126 1.59760450244326 -0.303408871204552 P49902 NT5C2 P49902.S502.p_NT5C2 P49902_S502s _1_1_502_502 P49902 P49902|P49902-2 Cytosolic purine 5'-nucleotidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15050.15050.5 22.74 22.74 6.477 5 1 1 0 712.9433 3480.7201 S502s TMT10 479 (R) AAHVLMPHESTVEHTHVDINEMEsPLATR (N) AAHVLMPHES(0.0)T(0.0)VEHT(0.0)HVDINEMES(0.99)PLAT(0.0)R s:Phosphorylated S NT5C2 65425 1 2 3141.1 59.52 HUMAN 1 7.7836 -1.1189 VDISLGDSPRRARGH-p E9PKC0;S612-p VDISLGDSPRRARGH 0.757201638201782 0.0926332221057354 0.049 -0.26 2.31266520587987 13.6646042123458 0.049 -0.26 0.587128928948244 0.0430070425657158 0.576982252515031 -2.63001089953643 E9PKC0 PLEKHA7 E9PKC0.S612.p_PLEKHA7 E9PKC0_S612s _1_1_612_612 E9PKC0 E9PKC0|Q6IQ23-2|Q6IQ23-3 Pleckstrin homology domain-containing family A member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16235.16235.2 15.71 8.51 3.475 3 1 1 0 727.8585 1374.7426 S612s TMT10 604 (R) SVDISLGDsPR (R) S(0.0)VDIS(0.0)LGDS(0.99)PR s:Phosphorylated S PLEKHA7 144991.9 5 7 809.1 221.2 HUMAN 1 2.3127 -13.6646 VDITRPDTFIRQQIM-p Q9Y625;T458-p VDITRPDTFIRQQIM 0.143638422086766 0.33706197113581 -0.345333333333333 -0.13 17.2115912683183 6.25785293262269 -0.345333333333333 -0.13 0.0190038184659904 0.236708965130578 -3.30442638393272 -1.3300415170986 Q9Y625 GPC6 Q9Y625.T458.p_GPC6 Q9Y625_T454tT458t_2_2_454_458 Q9Y625 Q9Y625|A0A087WT82 Glypican-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.29742.29742.5 8.9 1.77 8.181 4 2 2 0 971.08 4672.4065 N437n N442n N445n T454t T458t M465m TMT10 431 (R) YLPEIMnDGLTnQInNPEVDVDItRPDtFIRQQImALR (V) Y(0.0)LPEIM(0.0)N(0.99)DGLT(0.0)N(0.99)QIN(0.99)N(0.0)PEVDVDIT(0.99)RPDT(0.99)FIRQQIM(0.99)ALR n:Deamidated,t:Phosphorylated T,m:Oxidized methionine GPC6 63761.4 1 1 6879.1 8.9 HUMAN 1 -17.2116 -6.2579 VDKEKNLYRVHFPVA-p Q9C000;Y1098-p VDKEKNLYRVHFPVA 0.665261908909664 0.316481538725525 0.205 0.293333333333333 3.30965447030112 6.60210578151354 0.205 0.293333333333333 0.466696509749835 0.218670109210739 0.78263447525482 1.39080531892182 Q9C000 NLRP1 Q9C000.Y1098.p_NLRP1 Q9C000_Y1098yS1107s_2_2_1098_1107 Q9C000 Q9C000|Q9C000-4|Q9C000-2|Q9C000-3|Q9C000-5 NACHT, LRR and PYD domains-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.39006.39006.4 7.93 1.39 4.934 4 2 2 0 858.3959 3269.6815 N1096n Y1098y S1107s TMT10 1096 (K) nLyRVHFPVAGsYRWPNTGLCFVMR (E) N(0.99)LY(0.99)RVHFPVAGS(0.99)Y(0.0)RWPN(0.0)T(0.0)GLCFVMR C:Carbamidomethylation,n:Deamidated,y:Phosphorylated Y,s:Phosphorylated S NLRP1 167916.6 1 2 6342.1 12.25 HUMAN 1 3.3097 6.6021 VDKPDIGSYERHQIE-p Q8TDJ6-3;S2123-p VDKPDIGSYERHQIE 0.0511487796737011 0.00165401543705715 -1.041 -1.11933333333333 28.3045090937253 44.2103903609499 -1.041 -1.11933333333333 0.00147757349018272 3.79280892184192e-05 -5.93239992051263 -12.197484963529 Q8TDJ6 DMXL2 Q8TDJ6.3.S2123.p_DMXL2 Q8TDJ6-3_S2123s _1_1_2123_2123 Q8TDJ6-3 Q8TDJ6-3|Q8TDJ6-2 Isoform 3 of DmX-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23324.23324.4 14.46 11.78 3.891 6 1 1 0 954.225 3733.9086 S2123s TMT10 2101 (K) TYSKVESDLLDQEEMVDKPDIGsYER (H) T(0.0)Y(0.0)S(0.0)KVES(0.0)DLLDQEEMVDKPDIGS(0.99)Y(0.0)ER K:TMT10,s:Phosphorylated S DMXL2 343259.8 1 7 1366.1 149.7 HUMAN 1 -28.3045 -44.2104 VDKRLEQSQPEYKAL-p Q86X02;S432-p VDKRLEQSQPEYKAL 0.109765188029102 0.133664697701418 -0.517 -0.427 20.0808887414522 11.5207949320821 -0.517 -0.427 0.00981547058399384 0.070456409383918 -3.89633150432679 -2.24654506133597 Q86X02 CDR2L Q86X02.S432.p_CDR2L Q86X02_S432s _1_1_432_432 Q86X02 Q86X02 Cerebellar degeneration-related protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8031.8031.3 11.16 11.16 5.033 2 1 1 0 605.9859 1735.9743 S432s TMT10 428 (K) RLEQsQPEYK (A) RLEQS(0.99)QPEY(0.0)K K:TMT10,s:Phosphorylated S CDR2L 53408.9 1 6 1833.1 112.07 HUMAN 1 -20.0809 -11.5208 VDKVLAQSRHELDSK-p O43347;S81-p VDKVLAQSRHELDSK 0.585434871518719 0.774412274013481 0.0796666666666667 0.0296666666666667 4.27681750111617 1.53546103128306 0.0796666666666667 0.0296666666666667 0.373523774799808 0.702188797961035 0.969687325409025 0.403235570224793 O43347 MSI1 O43347.S81.p_MSI1 O43347_S81s _1_1_81_81 O43347 O43347 RNA-binding protein Musashi homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8572.8572.4 7.19 7.19 3.754 2 1 1 0 481.0143 1841.0645 S81s TMT10 77 (K) VLAQsRHELDSK (T) VLAQS(0.99)RHELDS(0.0)K K:TMT10,s:Phosphorylated S MSI1 39352 2 2 4171.1 36.24 HUMAN 1 4.2768 1.5355 VDLDLAASHRKRGPM-p Q15751;S1541-p VDLDLAASHRKRGPM 0.220304594594813 0.0905164276146611 -0.358666666666667 -0.378 12.6478491024157 13.8025316499922 -0.358666666666667 -0.378 0.0543519449630762 0.0416626446967478 -2.447800605118 -2.6551684401104 Q15751 HERC1 Q15751.S1541.p_HERC1 Q15751_S1541s _1_1_1541_1541 Q15751 Q15751 Probable E3 ubiquitin-protein ligase HERC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9532.9532.4 12.85 12.85 99 1 1 1 0 509.0312 1953.1394 S1541s TMT10 1533 (R) NVDLDLAAsHRKR (G) NVDLDLAAS(1.0)HRKR K:TMT10,s:Phosphorylated S HERC1 539122.1 3 9 269.1 394.57 HUMAN 1 -12.6478 -13.8025 VDLKNDQTPSEVLII-p Q6IBW4-4;T138-p VDLKNDQTPSEVLII 0.419598745385739 0.0583147404245154 -0.145333333333333 0.297333333333333 6.96088762217054 16.4437804490287 -0.145333333333333 0.297333333333333 0.201331272180549 0.0226788983839151 -1.45416504656989 3.15156748092978 Q6IBW4 NCAPH2 Q6IBW4.4.T138.p_NCAPH2 Q6IBW4-4_T138t _1_1_138_138 Q6IBW4-4 Q6IBW4-4|A0A0A6YYG7|Q6IBW4-2|Q6IBW4-5 Isoform 4 of Condensin-2 complex subunit H2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.38300.38300.4 26.24 26.24 1.149 2 1 1 0 851.2039 3321.809 T138t TMT10 135 (K) NDQtPSEVLIIPLLPMALVAPDEMEK (N) NDQT(0.99)PS(0.0)EVLIIPLLPMALVAPDEMEK K:TMT10,t:Phosphorylated T NCAPH2 68752.9 3 2 1022.1 187.64 HUMAN 1 -6.9609 16.4438 VDLLPPMSPLSFDPA-p Q7Z4H7;S406-p VDLLPPMSPLSFDPA 0.0926681628012438 0.087292430057637 -0.333666666666667 -0.222666666666667 21.9883079290965 14.0213344389553 -0.333666666666667 -0.222666666666667 0.0063265829571858 0.0396156290223701 -4.31925613275528 -2.69521658219162 Q7Z4H7 HAUS6 Q7Z4H7.S406.p_HAUS6 Q7Z4H7_S406s _1_1_406_406 Q7Z4H7 Q7Z4H7|Q7Z4H7-3|Q5VY60|Q7Z4H7-2 HAUS augmin-like complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37325.37325.4 21.98 21.98 1.173 6 1 1 0 868.6844 3391.7536 S406s TMT10 394 (K) GWTPSVDLLPPMsPLSFDPASEEVYAK (S) GWT(0.0)PS(0.0)VDLLPPMS(0.99)PLS(0.0)FDPAS(0.0)EEVY(0.0)AK K:TMT10,s:Phosphorylated S HAUS6 109703.4 7 2 1302.1 156.27 HUMAN 1 -21.9883 -14.0213 VDLSKVPSPLTDEEG-p Q5T0F9;S593-p VDLSKVPSPLTDEEG 0.621767197765368 0.968149405600761 0.0696666666666667 -0.00499999999999997 3.83639692028263 0.199533546040925 0.0696666666666667 -0.00499999999999997 0.413390324812544 0.955095162502228 0.885724668308559 -0.0589611569041391 Q5T0F9 CC2D1B Q5T0F9.S593.p_CC2D1B Q5T0F9_S593sT596t_2_2_593_596 Q5T0F9 Q5T0F9|Q5T0F9-2|Q5T0F9-3 Coiled-coil and C2 domain-containing protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.23543.23543.5 15.8 12.56 2.747 4 2 2 0 798.8035 3830.0489 S593s T596t TMT10 582 (R) SGRPVDLSKVPsPLtDEEGDFILIHHEDLR (L) S(0.0)GRPVDLS(0.0)KVPS(0.99)PLT(0.99)DEEGDFILIHHEDLR K:TMT10,s:Phosphorylated S,t:Phosphorylated T CC2D1B 94451 1 5 2588.1 77.5 HUMAN 1 3.8364 -0.1995 VDLYQQASPPDALRW-p P48634;S2113-p VDLYQQASPPDALRW 0.733466464014547 0.124245590642598 -0.0513333333333333 -0.224666666666667 2.54861281121816 11.9478775483772 -0.0513333333333334 -0.224666666666667 0.556081848133532 0.0638575489798194 -0.627138527065602 -2.32194029427603 P48634 PRRC2A P48634.S2113.p_PRRC2A P48634_S2113s _1_1_2113_2113 P48634 P48634|P48634-3|P48634-2|P48634-4 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.20030.20030.2 15.98 12.44 7.953 2 1 1 0 941.4702 1801.9646 S2113s TMT10 2106 (R) VDLYQQAsPPDALR (W) VDLY(0.0)QQAS(0.99)PPDALR s:Phosphorylated S PRRC2A 229315.4 4 34 36.1 882.05 HUMAN 1 -2.5486 -11.9479 VDMEKAESLQVTRGD-p P46459;S472-p VDMEKAESLQVTRGD 0.956658906568786 0.00404943846968545 -0.0146666666666667 0.785666666666667 0.377765753643041 35.2365346526604 -0.0146666666666667 0.785666666666667 0.91669196489955 0.00029946531943198 -0.109579563431855 8.18169913737499 P46459 NSF P46459.S472.p_NSF P46459_S472s _1_1_472_472 P46459 P46459|I3L0N3 Vesicle-fusing ATPase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9272.9272.2 12.31 12.31 3.524 2 1 1 0 606.8127 1132.6524 S472s TMT10 470 (K) AEsLQVTR (G) AES(0.99)LQVT(0.0)R s:Phosphorylated S NSF 83106.4 1 4 2984.1 64.07 HUMAN 1 -0.3778 35.2365 VDNLEGKTPPVFASE-p Q96PZ0;T610-p VDNLEGKTPPVFASE 0.265419473261086 0.0234731061159454 -0.164666666666667 0.345333333333333 10.9237688540242 22.2249217062176 -0.164666666666667 0.345333333333333 0.0808394061667256 0.00599111739186372 -2.14275955237114 4.36887257576442 Q96PZ0 PUS7 Q96PZ0.T610.p_PUS7 Q96PZ0_T610t _1_1_610_610 Q96PZ0 Q96PZ0 Pseudouridylate synthase 7 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31766.31766.4 14.78 14.78 2.625 3 1 1 0 839.7049 3275.8131 T610t TMT10 596 (K) IPLFNTDVDNLEGKtPPVFASEGK (Y) IPLFNT(0.0)DVDNLEGKT(0.99)PPVFAS(0.0)EGK K:TMT10,t:Phosphorylated T PUS7 75376.4 1 2 4927.1 24.99 HUMAN 1 -10.9238 22.2249 VDNSLDGSDVSEPAK-p Q68DA7-5;S11-p VDNSLDGSDVSEPAK 0.769256878109637 0.791295002595274 0.0423333333333333 -0.0323333333333333 2.1819450388095 1.41477481055806 0.0423333333333333 -0.0323333333333333 0.605069826439002 0.721975597690241 0.548728419299344 -0.374872065582331 Q68DA7 FMN1 Q68DA7.5.S11.p_FMN1 Q68DA7-5_S11s _1_1_11_11 Q68DA7-5 Q68DA7-5|Q68DA7-3 Isoform 5 of Formin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.34870.34870.3 20.62 20.62 1.113 5 1 1 0 1303.9746 3829.9418 S11s Acetyl 1 (-) MENVDNSLDGsDVSEPAKPEAGLEVAQSILSK (F) MENVDNS(0.0)LDGS(0.99)DVS(0.0)EPAKPEAGLEVAQS(0.0)ILS(0.0)K K:TMT10,s:Phosphorylated S FMN1 132895.4 9 2 727.1 236.56 HUMAN 1 2.1819 -1.4148 VDPKGYLTDLNSMIP-p O94906;T275-p VDPKGYLTDLNSMIP 0.929939245487504 0.740110122995943 -0.0133333333333333 0.0323333333333333 0.625140695280804 1.80176232265224 -0.0133333333333333 0.0323333333333333 0.865936269786924 0.660425399743485 -0.17701158585198 0.464387140392389 O94906 PRPF6 O94906.T275.p_PRPF6 O94906_T275t_1_1_275_275 O94906 O94906|O94906-2 Pre-mRNA-processing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29780.29780.4 15.63 15.63 1.176 4 1 1 0 704.1069 2732.4329 T275t N278n TMT10 272 (K) GYLtDLnSMIPTHGGDINDIK (K) GY(0.0)LT(0.99)DLN(0.99)S(0.0)MIPT(0.0)HGGDIN(0.0)DIK K:TMT10,t:Phosphorylated T,n:Deamidated PRPF6 107721.8 9 7 1650.1 123.56 HUMAN 1 -0.6251 1.8018 VDPNRRMSVAEQVDY-p Q96Q15;S3632-p VDPNRRMSVAEQVDY 0.859564008462243 0.989916927592775 0.026 0.00266666666666667 1.28313015842472 0.0668453517960984 0.026 0.0026666666666667 0.744195404991197 0.984726135929507 0.343464681398198 0.0200427968882177 Q96Q15 SMG1 Q96Q15.S3632.p_SMG1 Q96Q15_S3632s _1_1_3632_3632 Q96Q15 Q96Q15|Q96Q15-2|Q96Q15-3|Q96Q15-4 Serine/threonine-protein kinase SMG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19191.19191.4 12.7 12.7 7.39 2 1 1 0 693.8598 2692.4493 S3632s TMT10 3624 (R) DVDPNRRMsVAEQVDYVIK (E) DVDPNRRMS(0.99)VAEQVDY(0.0)VIK K:TMT10,s:Phosphorylated S SMG1 414601.1 2 10 1337.1 152.31 HUMAN 1 1.2831 0.0668 VDQDGDPSDRMEVQE-p P78527;S3215-p VDQDGDPSDRMEVQE 0.995213264133306 0.0656495619196631 -0.00100000000000001 0.316333333333333 0.0406585132743557 15.7391910975205 -0.001 0.316333333333333 0.990681718133933 0.0266735543102153 -0.0122282197824267 3.01618259093191 P78527 PRKDC P78527.S3215.p_PRKDC P78527_S3215s _1_1_3215_3215 P78527 P78527|P78527-2 DNA-dependent protein kinase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29080.29080.4 22.35 19.34 3.857 5 1 1 0 1103.5042 4331.0129 S3215s TMT10 3197 (K) LTPLPEDNSMNVDQDGDPsDRMEVQEQEEDISSLIR (S) LT(0.0)PLPEDNS(0.0)MNVDQDGDPS(0.99)DRMEVQEQEEDIS(0.0)S(0.0)LIR s:Phosphorylated S PRKDC 474044.1 2 14 362.1 342.68 HUMAN 1 -0.0407 15.7392 VDQFLNFSPKEAPVD-p Q70SY1;S191-p VDQFLNFSPKEAPVD 0.10854647135141 0.018356818766536 -0.527333333333333 0.369333333333333 20.2237317761257 23.8931569921788 -0.527333333333333 0.369333333333333 0.00949788315265183 0.00408022676899033 -3.92713097901817 4.76319494784609 Q70SY1 CREB3L2 Q70SY1.S191.p_CREB3L2 Q70SY1_S191s _1_1_191_191 Q70SY1 Q70SY1|Q70SY1-2|Q70SY1-3|C9JPH0 Cyclic AMP-responsive element-binding protein 3-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26674.26674.4 16.07 16.07 99 1 1 1 0 702.8922 2728.5641 S191s TMT10 177 (K) IKLEPHEVDQFLNFsPK (E) IKLEPHEVDQFLNFS(1.0)PK K:TMT10,s:Phosphorylated S CREB3L2 57756.1 1 1 3834.1 42.08 HUMAN 1 -20.2237 23.8932 VDQGGGGSPRKKVAL-p Q9UPU5;S1943-p VDQGGGGSPRKKVAL 0.0732853965819104 0.020379930359248 0.361666666666667 -0.411333333333333 24.403205339925 23.1483286206183 0.361666666666667 -0.411333333333333 0.00362810181410455 0.00484358736852642 4.89419775887467 -4.58440262843358 Q9UPU5 USP24 Q9UPU5.S1943.p_USP24 Q9UPU5_S1943s_1_1_1943_1943 Q9UPU5 Q9UPU5 Ubiquitin carboxyl-terminal hydrolase 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4839.4839.3 17.98 13.98 4.899 5 1 1 0 858.0408 2491.1607 N1932n S1943s TMT10 1923 (R) QDSSSEVGEnGRSVDQGGGGsPR (K) QDS(0.0)S(0.0)S(0.0)EVGEN(1.0)GRS(0.0)VDQGGGGS(0.99)PR n:Deamidated,s:Phosphorylated S USP24 297383.8 5 133 8.4 1346.57 HUMAN 1 24.4032 -23.1483 VDRLLLASPPNERNG-p Q52LW3;S1029-p VDRLLLASPPNERNG 0.577724041913956 0.0810466504635107 -0.0806666666666667 -0.248333333333333 4.38484877692938 14.4710466649226 -0.0806666666666667 -0.248333333333333 0.364346936553259 0.0357186744520612 -0.990015342496662 -2.77808669244041 Q52LW3 ARHGAP29 Q52LW3.S1029.p_ARHGAP29 Q52LW3_S1029s _1_1_1029_1029 Q52LW3 Q52LW3 Rho GTPase-activating protein 29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20188.20395.2 12.95 12.95 99 1 1 1 0 709.8851 1338.7943 S1029s TMT10 1025 (R) LLLAsPPNER (N) LLLAS(1.0)PPNER s:Phosphorylated S ARHGAP29 143601.5 5 16 517.1 284.75 HUMAN 1 -4.3848 -14.471 VDRLRRMSLIEEEGS-p E9PK47;S430-p VDRLRRMSLIEEEGS 0.356784883442257 0.742105405230105 -0.175666666666667 -0.0336666666666667 8.3211795430184 1.78539209754261 -0.175666666666667 -0.0336666666666667 0.147191267692511 0.662919494080661 -1.69083584986948 -0.460681577253749 E9PK47 NotFound E9PK47.S430.p_NotFound E9PK47_S430s _1_1_430_430 E9PK47 P06737|E9PK47 Alpha-1,4 glucan phosphorylase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14039.14039.3 10.2 10.2 10.205 2 1 1 0 606.3154 1736.9617 S430s TMT10 428 (R) RMsLIEEEGSK (R) RMS(0.99)LIEEEGS(0.0)K K:TMT10,s:Phosphorylated S PYGL 94467.9 1 1 3590.2 47.63 HUMAN 1 -8.3212 -1.7854 VDRNLQVSLLAVDEM-p O76090-3;S258-p VDRNLQVSLLAVDEM 0.706540552407433 0.000952253650599092 0.0886666666666667 1.404 2.83538892407838 53.3640479738522 0.0886666666666667 1.404 0.520548390003309 4.60887789807565e-06 0.686774912804582 18.1447581925245 O76090 BEST1 O76090.3.S258.p_BEST1 O76090-3_S258s_1_1_258_258 O76090-3 O76090-3 Isoform 3 of Bestrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14726.14726.5 8.43 4.28 0 2 1 1 0 723.9355 3501.7166 N254n S258s M272m M276m N279n Hydrogen 254 (R) nLQVsLLAVDEMHQDLPRmEPDmYWnK (P) N(1.0)LQVS(0.99)LLAVDEM(0.33)HQDLPRM(0.33)EPDM(0.33)Y(0.0)WN(1.0)K K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S,m:Oxidized methionine BEST1 69494.3 2 1 6966.1 8.43 HUMAN 1 2.8354 53.364 VDRRSVHSEHSARSL-p J3KNL6;S1350-p VDRRSVHSEHSARSL 0.181776097173604 0.00698909749920336 0.415333333333333 0.506 14.5802350613021 30.896221320397 0.415333333333333 0.506 0.0348318461836071 0.000813538045914179 2.80008836809217 6.69846630195013 J3KNL6 SEC16A J3KNL6.S1350.p_SEC16A J3KNL6_S1350s _1_1_1350_1350 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.2278.2278.3 16.29 16.29 4.184 3 1 1 0 440.2086 1238.6439 S1350s TMT10 1347 (R) SVHsEHSAR (S) S(0.0)VHS(0.99)EHS(0.0)AR s:Phosphorylated S SEC16A 253486.5 2 28 15.1 1143.82 HUMAN 1 14.5802 30.8962 VDRTESRSTEPELIQ-p Q15758;S493-p VDRTESRSTEPELIQ 0.838274783466982 0.988520181148994 -0.0346666666666667 0.00200000000000002 1.4828453617343 0.076192513313222 -0.0346666666666667 0.00199999999999999 0.710747701393121 0.982609024939763 -0.390963845892903 0.0228214663784916 Q15758 SLC1A5 Q15758.S493.p_SLC1A5 Q15758_S493s _1_1_493_493 Q15758 Q15758|M0QXM4|Q15758-2|Q15758-3 Neutral amino acid transporter B(0) HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15366.15366.3 15.82 15.82 1.114 4 1 1 0 719.0511 2075.1749 S493s TMT10 489 (R) TESRsTEPELIQVK (S) T(0.0)ES(0.0)RS(0.99)T(0.0)EPELIQVK K:TMT10,s:Phosphorylated S SLC1A5 57053.7 4 2 1953.1 105.31 HUMAN 1 -1.4828 0.0762 VDRTLIPSPPPRPKN-p Q9NZ52;S159-p VDRTLIPSPPPRPKN 0.628647939920457 0.451790155283626 -0.0806666666666667 0.071 3.74559619613895 4.59873186441492 -0.0806666666666667 0.071 0.422124326169125 0.346838112052814 -0.868176618130299 1.02978781139289 Q9NZ52 GGA3 Q9NZ52.S159.p_GGA3 Q9NZ52_S159s _1_1_159_159 Q9NZ52 Q9NZ52|Q9NZ52-2|Q9NZ52-4|J3KSS7|Q9NZ52-3 ADP-ribosylation factor-binding protein GGA3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15738.15943.3 14.29 14.29 4.156 2 1 1 0 581.0109 1661.0514 S159s TMT10 155 (R) TLIPsPPPRPK (N) T(0.0)LIPS(0.99)PPPRPK K:TMT10,s:Phosphorylated S GGA3 78770.3 15 1 3318.1 54 HUMAN 1 -3.7456 4.5987 VDSEGDFSENDDAAG-p O43823;S328-p VDSEGDFSENDDAAG 0.617937770751306 0.164031797091666 0.0716666666666667 0.29 3.88120403419994 10.323006806938 0.0716666666666667 0.29 0.409147212391594 0.0928323446106608 0.8943524680461 2.03703398844449 O43823 AKAP8 O43823.S328.p_AKAP8 O43823_S328s _1_1_328_328 O43823 O43823 A-kinase anchor protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15933.15933.2 20.01 14.57 5.82 2 1 1 0 1127.955 2174.9312 S328s TMT10 321 (R) VDSEGDFsENDDAAGDFR (S) VDS(0.0)EGDFS(0.99)ENDDAAGDFR s:Phosphorylated S AKAP8 76677.5 6 5 923.1 199.94 HUMAN 1 3.8812 10.323 VDSFRSSSPAPPSQQ-p Q9BXL6;S475-p VDSFRSSSPAPPSQQ 1 0.995328006895139 -9.25185853854297e-18 -0.00066666666666664 0 0.0275732839690411 8.01234452659818e-18 -0.000666666666666627 1 0.993671128944504 8.37969184201125e-17 -0.00830437831971229 Q9BXL6 CARD14 Q9BXL6.S475.p_CARD14 Q9BXL6_S475s _1_1_475_475 Q9BXL6 Q9BXL6|Q9BXL6-2|Q9BXL6-3 Caspase recruitment domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12487.12487.2 13.68 13.68 1.112 6 1 1 0 1008.0172 1935.0588 S475s TMT10 473 (R) SSsPAPPSQQSLYK (R) S(0.0)S(0.0)S(0.99)PAPPS(0.0)QQS(0.0)LY(0.0)K K:TMT10,s:Phosphorylated S CARD14 114922.3 7 6 816.1 219.94 HUMAN 1 0 -0.0276 VDSLSQRSPKASLRR-p Q9UHD8;S85-p VDSLSQRSPKASLRR 0.313179859530122 0.0471738466638665 0.628333333333333 -1.05266666666667 9.43183560391858 17.7445918285768 0.628333333333334 -1.05266666666667 0.113976794751933 0.01680895897191 1.88314610275498 -3.40801854781962 Q9UHD8 SEPT9 Q9UHD8.S85.p_SEPT9 Q9UHD8_S85s _1_1_85_85 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2|Q9UHD8-7 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.5210.5210.3 13.31 7.53 2.384 3 1 1 0 597.9895 1711.9855 S85s TMT10 77 (R) HVDSLSQRsPK (A) HVDS(0.0)LS(0.0)QRS(0.99)PK K:TMT10,s:Phosphorylated S SEPT9 65685.6 6 9 110.1 572.91 HUMAN 1 9.4318 -17.7446 VDSRTSCSPQKAQEA-p Q8IY33;S272-p VDSRTSCSPQKAQEA 0.0530637440823008 0.292337381518383 0.441 0.111 27.7192602210885 7.05041538985338 0.441 0.111 0.00169072890653596 0.197223408872384 5.76711866615036 1.46942640220645 Q8IY33 MICALL2 Q8IY33.S272.p_MICALL2 Q8IY33_S272s _1_1_272_272 Q8IY33 Q8IY33|Q8IY33-5 MICAL-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5689.5689.3 13.97 13.97 2.061 3 1 1 0 739.3833 2136.1686 S272s TMT10 269 (R) TSCsPQKAQEANK (A) T(0.0)S(0.0)CS(0.99)PQKAQEANK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MICALL2 98299.3 3 17 387.1 332.82 HUMAN 1 27.7193 7.0504 VDSSGNKSVLMERLK-p Q15424;S55-p VDSSGNKSVLMERLK 0.178067424706202 0.10634189580341 0.246 -0.291666666666667 14.8126025538129 12.8584543726499 0.246 -0.291666666666667 0.033017162304046 0.0517791077822589 2.84337796154988 -2.48424687148854 Q15424 SAFB Q15424.S55.p_SAFB Q15424_S55s _1_1_55_55 Q15424 Q15424|Q15424-2|K7ES42 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8311.8311.3 8.01 3.03 6.614 3 1 1 0 744.0535 2150.1752 S55s TMT10 46 (K) RNVDSSGNKsVLMER (L) RNVDS(0.0)S(0.0)GNKS(0.99)VLMER K:TMT10,s:Phosphorylated S SAFB 103096.3 3 16 83.1 629.62 HUMAN 1 14.8126 -12.8585 VDSVGVMSPPLSRSS-p Q12772;S855-p VDSVGVMSPPLSRSS 0.848303400988284 0.163271559810396 -0.034 0.141666666666667 1.38042271302935 10.347974827252 -0.034 0.141444563377831 0.72770897079445 0.0923001734764 -0.366757485807355 2.04137766656585 Q12772 SREBF2 Q12772.S855.p_SREBF2 Q12772_S855s _1_1_855_855 Q12772 Q12772 Sterol regulatory element-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27822.27822.3 14.38 14.38 2 4 1 1 0 750.7249 2170.1892 S855s TMT10 843 (K) LLHSFVDSVGVMsPPLSR (S) LLHS(0.0)FVDS(0.0)VGVMS(0.99)PPLS(0.0)R s:Phosphorylated S SREBF2 124997.6 1 4 2620.1 76.57 HUMAN 1 -1.3804 10.348 VDTDLPGSLGQSEEK-p Q9UK76;S115-p VDTDLPGSLGQSEEK 0.066791213713894 0.901272848642271 -0.387666666666667 0.0136666666666667 25.344700073102 0.630564854055959 -0.387666666666667 0.0136666666666667 0.00292098947887943 0.864855426242186 -5.13161182103143 0.178439802458206 Q9UK76 HN1 Q9UK76.S115.p_HN1 Q9UK76_S115s _1_1_115_115 Q9UK76 Q9UK76|Q9UK76-3 Jupiter microtubule associated homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22478.22480.5 27.15 23.15 1.207 5 1 1 0 951.0859 4671.4306 S115s TMT10 100 (K) GEGDIHENVDTDLPGsLGQSEEKPVPAAPVPSPVAPAPVPSR (R) GEGDIHENVDT(0.0)DLPGS(0.99)LGQS(0.0)EEKPVPAAPVPS(0.0)PVAPAPVPS(0.0)R K:TMT10,s:Phosphorylated S JPT1 16014.2 5 9 705.1 239.23 HUMAN 1 -25.3447 0.6306 VDTKAAGSGELGVTM-p O75369-8;S484-p VDTKAAGSGELGVTM 0.23797684518109 0.0329196901090389 0.190666666666667 0.302333333333333 11.934702376835 19.9965064295264 0.190666666666667 0.302333333333333 0.0640515674775076 0.010008047479654 2.32075795035131 3.8745758591473 O75369 FLNB O75369.8.S484.p_FLNB O75369-8_S484s _1_1_484_484 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.4837.4837.2 7.82 7.82 2.504 2 1 1 0 829.941 1578.8926 S484s TMT10 481 (K) AAGsGELGVTMK (G) AAGS(0.99)GELGVT(0.0)MK K:TMT10,s:Phosphorylated S FLNB 283797.6 2 6 67.1 680.07 HUMAN 1 11.9347 19.9965 VDTKKQKTDEDD___-p P06454;T107-p VDTKKQKTDEDD___ 0.857937859723605 0.0585659912647194 -0.046 -0.378666666666667 1.29646741716991 16.4130426115645 -0.046 -0.378666666666667 0.74191347373402 0.0228399810288271 -0.346675530365633 -3.14561184352799 P06454 PTMA P06454.T107.p_PTMA P06454_T107t _1_1_107_107 P06454 B8ZZW7|B8ZZA1|P06454|P06454-2|B8ZZQ6 Prothymosin alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9277.9277.4 12.48 12.48 1.172 2 1 1 0 849.1533 3313.6213 T107t TMT10 91 (R) AAEDDEDDDVDTKKQKtDEDD (-) AAEDDEDDDVDT(0.0)KKQKT(0.99)DEDD K:TMT10,t:Phosphorylated T PTMA 12202.8 9 3 2850.1 68.1 HUMAN 1 -1.2965 -16.413 VDVKEAETDSDSD__-p O75643;T2131-p VDVKEAETDSDSD__ 0.1560557092084 0.639074954637236 -0.25 0.0536666666666667 16.1990663451035 2.64894275748675 -0.25 0.0536666666666667 0.0239934868031899 0.543382595954612 -3.10650699843874 0.648074821218529 O75643 SNRNP200 O75643.T2131.p_SNRNP200 O75643_T2131tS2133s_2_2_2131_2133 O75643 O75643|O75643-2 U5 small nuclear ribonucleoprotein 200 kDa helicase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21369.21369.3 9.18 9.18 1.165 4 2 2 0 754.6532 2102.0177 T2131t S2133s TMT10 2122 (K) FSVDVKEAEtDsDSD (-) FS(0.0)VDVKEAET(0.99)DS(0.99)DS(0.0)D K:TMT10,t:Phosphorylated T,s:Phosphorylated S SNRNP200 246157.8 1 9 2427.1 83.94 HUMAN 1 -16.1991 2.6489 VDVQNCISR______-p Q14573;S2670-p VDVQNCISR______ 0.267472815222283 0.124924135914697 0.171 0.161333333333333 10.8527739811034 11.9150904256234 0.171 0.161333333333333 0.0821717624328445 0.0643414668142782 2.1303360531437 2.31613696676978 Q14573 ITPR3 Q14573.S2670.p_ITPR3 Q14573_S2670s_1_1_2670_2670 Q14573 Q14573 Inositol 1,4,5-trisphosphate receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22601.23098.3 15.79 15.79 99 1 1 1 0 573.2775 1636.8678 N2667n S2670s TMT10 2660 (R) LGFVDVQnCIsR (-) LGFVDVQN(1.0)CIS(1.0)R C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S ITPR3 307010.8 8 10 1377.1 148.68 HUMAN 1 10.8528 11.9151 VDVTYDGSPVPSSPF-p P21333-2;S1338-p VDVTYDGSPVPSSPF 0.414100783868818 0.189085639145194 0.117 0.283333333333333 7.06436282595353 9.51299736728628 0.117 0.283333333333333 0.196591038746644 0.111866554833246 1.47227494882942 1.89648566473341 P21333 FLNA P21333.2.S1338.p_FLNA P21333-2_S1338s _1_1_1338_1338 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54|A0A087WWY3 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26985.26985.4 29.54 29.54 1.245 12 1 1 0 1372.3843 5406.5499 S1338s TMT10 1313 (R) GDGMYKVEYTPYEEGLHSVDVTYDGsPVPSSPFQVPVTEGCDPSR (V) GDGMY(0.0)KVEY(0.0)T(0.0)PY(0.0)EEGLHS(0.0)VDVT(0.0)Y(0.0)DGS(0.99)PVPS(0.0)S(0.0)PFQVPVT(0.0)EGCDPS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S FLNA 282751.6 4 7 198.1 454.47 HUMAN 1 7.0644 9.513 VDYGRRLSADIRLRS-p O60307;S747-p VDYGRRLSADIRLRS 0.170911150358501 0.546222663433763 -0.577333333333333 0.140666666666667 15.3048270480808 3.53220027191133 -0.577333333333334 0.140666666666667 0.0294793087163947 0.443383954816079 -2.93581966895065 0.826453571859917 O60307 MAST3 O60307.S747.p_MAST3 O60307_S747s _1_1_747_747 O60307 O60307 Microtubule-associated serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.4788.4788.2 7.59 1.6 99 1 1 1 0 455.7295 830.4843 S747s Hydrogen 745 (R) RLsADIR (L) RLS(1.0)ADIR s:Phosphorylated S MAST3 143933.5 2 28 121.3 549.41 HUMAN 1 -15.3048 3.5322 VDYIPQDSPTPSVRQ-p Q5T0Z8;S558-p VDYIPQDSPTPSVRQ 0.636657897799904 0.951627785467761 -0.087 0.00666666666666667 3.65868768466951 0.306900020726657 -0.087 0.00666666666666667 0.430656723137574 0.931772734368259 -0.851298014570203 0.0896646904187341 Q5T0Z8 C6orf132 Q5T0Z8.S558.p_C6orf132 Q5T0Z8_S558s _1_1_558_558 Q5T0Z8 Q5T0Z8 Uncharacterized protein C6orf132 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29673.29697.4 25.26 25.26 2.851 12 1 1 0 946.2225 3701.8959 S558s TMT10 531 (K) SLGGSSLTETEAAPSLTLPSVDYIPQDsPTPSVR (Q) S(0.0)LGGS(0.0)S(0.0)LT(0.0)ET(0.0)EAAPS(0.0)LT(0.0)LPS(0.0)VDY(0.0)IPQDS(0.99)PT(0.0)PS(0.0)VR s:Phosphorylated S C6orf132 124488.2 2 10 336.1 355.09 HUMAN 1 -3.6587 0.3069 VDYIRPASPATETVP-p Q7KZF4;S426-p VDYIRPASPATETVP 0.685324237444514 0.705485455997733 0.055 -0.0366666666666666 3.07878195061724 2.08109279817065 0.055 -0.0366666666666667 0.492177555511604 0.619285227157192 0.736368875239909 -0.526624592197554 Q7KZF4 SND1 Q7KZF4.S426.p_SND1 Q7KZF4_S426s _1_1_426_426 Q7KZF4 Q7KZF4 Staphylococcal nuclease domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23604.23604.4 23.66 18.92 1.475 6 1 1 0 732.8724 2848.5042 S426s TMT10 415 (K) VNVTVDYIRPAsPATETVPAFSER (T) VNVT(0.0)VDY(0.0)IRPAS(0.99)PAT(0.0)ET(0.0)VPAFS(0.0)ER s:Phosphorylated S SND1 102679.8 4 3 1505.1 135.67 HUMAN 1 3.0788 -2.0811 VDYNMPRSPVEMDED-p O95425-2;S896-p VDYNMPRSPVEMDED 0.456945741797906 0.215243537884541 -0.123333333333333 -0.131666666666667 6.26650849460202 8.77778677481335 -0.123333333333333 -0.131666666666667 0.236237669992282 0.13250166100912 -1.33190419120881 -1.7692781686436 O95425 SVIL O95425.2.S896.p_SVIL O95425-2_S896s _1_1_896_896 O95425-2 O95425|O95425-3|O95425-4|O95425-2 Isoform 2 of Supervillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32669.32669.5 26.75 26.75 4.452 4 1 1 0 743.7493 3634.7486 S896s TMT10 888 (R) SVDYNMPRsPVEMDEDFDVIFDPYAPK (L) S(0.0)VDY(0.0)NMPRS(0.99)PVEMDEDFDVIFDPY(0.0)APK K:TMT10,s:Phosphorylated S SVIL 202384.1 11 20 406.2 324.74 HUMAN 1 -6.2665 -8.7778 VEAAAELSAKDLKEK-p P20962;S13-p VEAAAELSAKDLKEK 0.953364718525072 0.0123363927352173 -0.00966666666666667 0.429333333333333 0.4095635811468 26.6508869214271 -0.00966666666666668 0.429333333333333 0.910004713642087 0.00216227689583902 -0.118422641704686 5.46700002523094 P20962 PTMS P20962.S13.p_PTMS P20962_S13s _1_1_13_13 P20962 F5GXR3|P20962 Parathymosin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14463.14463.2 15.66 15.66 11.148 2 1 1 0 807.4337 1533.8888 S13s TMT10 5 (K) SVEAAAELsAK (D) S(0.0)VEAAAELS(0.99)AK K:TMT10,s:Phosphorylated S PTMS 11529.7 2 2 3501.1 49.63 HUMAN 1 -0.4096 26.6509 VEAAEARSPAPGYKR-p Q96K58;S10-p VEAAEARSPAPGYKR 0.698770973809784 0.0187250405617923 -0.076 0.377 2.92598404761371 23.7684050924529 -0.076 0.377 0.509802070813208 0.00419913165023501 -0.705338308765872 4.73293175231978 Q96K58 ZNF668 Q96K58.S10.p_ZNF668 Q96K58_S10s _1_1_10_10 Q96K58 Q96K58 Zinc finger protein 668 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15991.15991.3 17.21 17.21 11.847 2 1 1 0 686.3247 1976.9949 S10s Acetyl 1 (-) MEVEAAEARsPAPGYK (R) MEVEAAEARS(0.99)PAPGY(0.0)K K:TMT10,s:Phosphorylated S ZNF668 69942.9 2 1 3617.1 46.83 HUMAN 1 -2.926 23.7684 VEAERPHSLIGVIRE-p Q15884;S440-p VEAERPHSLIGVIRE 0.691324386103875 0.00515912647414045 -0.159 0.676333333333333 3.00599790229809 33.2791376127004 -0.159 0.676333333333333 0.500495537705319 0.000469987425689519 -0.721630276954373 7.48167069220554 Q15884 FAM189A2 Q15884.S440.p_FAM189A2 Q15884_S440s _1_1_440_440 Q15884 Q15884|Q15884-1|A0A0A0MR12|Q15884-2 Protein FAM189A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11392.11392.4 8.35 8.35 99 1 1 1 0 511.0381 1961.1606 S440s TMT10 432 (R) RVEAERPHsLIGVIR (E) RVEAERPHS(1.0)LIGVIR s:Phosphorylated S FAM189A2 50729.5 1 1 6978.1 8.35 HUMAN 1 -3.006 33.2791 VEAIKRPSPDEPMTN-p Q9UHD1;S110-p VEAIKRPSPDEPMTN 0.120014369208718 0.822343361316515 -0.302333333333333 0.0256666666666667 19.1573081504832 1.18977544219982 -0.302333333333333 0.0256666666666667 0.0121414116779455 0.760365591648855 -3.70038802013564 0.320794323877368 Q9UHD1 CHORDC1 Q9UHD1.S110.p_CHORDC1 Q9UHD1_S110s _1_1_110_110 Q9UHD1 Q9UHD1|Q9UHD1-2|E9PPQ5 Cysteine and histidine-rich domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21843.21843.5 14.31 14.31 4.577 2 1 1 0 891.2963 4372.4873 S110s TMT10 92 (K) FQEHIIQAPKPVEAIKRPsPDEPMTNLELK (I) FQEHIIQAPKPVEAIKRPS(0.99)PDEPMT(0.0)NLELK K:TMT10,s:Phosphorylated S CHORDC1 38287.9 2 3 1501.1 135.88 HUMAN 1 -19.1573 1.1898 VEAILEESTEKLKSL-p Q96K76;S876-p VEAILEESTEKLKSL 0.105068796644449 0.14706983860143 -0.46 0.212666666666667 20.5975087814986 10.9620608496621 -0.46 0.212666666666667 0.0087146333911995 0.0801297734807906 -4.00837182914926 2.14849926151444 Q96K76 USP47 Q96K76.S876.p_USP47 Q96K76_S876s _1_1_876_876 Q96K76 Q96K76|Q96K76-4|Q96K76-2 Ubiquitin carboxyl-terminal hydrolase 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20854.20854.3 10.04 6.79 1.702 3 1 1 0 624.9926 1792.9944 S876s TMT10 868 (K) SVEAILEEsTEK (L) S(0.0)VEAILEES(0.99)T(0.0)EK K:TMT10,s:Phosphorylated S USP47 158677.8 1 5 770.1 227.83 HUMAN 1 -20.5975 10.9621 VEAQFDGSDSEDGHG-p Q8IYB7;S173-p VEAQFDGSDSEDGHG 0.918274613085567 0.0939018713289767 0.016 0.237666666666667 0.72267179997887 13.5875012316556 0.016 0.237666666666667 0.846706356165242 0.0437773911479676 0.202789778089418 2.61597646088415 Q8IYB7 DIS3L2 Q8IYB7.S173.p_DIS3L2 Q8IYB7_S173s _1_1_173_173 Q8IYB7 Q8IYB7|Q8IYB7-2|Q8IYB7-3|Q8IYB7-5|Q8IYB7-4 DIS3-like exonuclease 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.27398.27398.3 28.21 24.95 1.108 6 1 1 0 1415.6747 4165.025 S173s TMT10 157 (K) SYNDSPDVIVEAQFDGsDSEDGHGITQNVLVDGVK (K) S(0.0)Y(0.0)NDS(0.0)PDVIVEAQFDGS(0.99)DS(0.0)EDGHGIT(0.0)QNVLVDGVK K:TMT10,s:Phosphorylated S DIS3L2 100304.4 7 3 1919.1 107.1 HUMAN 1 0.7227 13.5875 VEAVAPGTPTMGAPK-p O95248-4;T1845-p VEAVAPGTPTMGAPK 0.265567501050657 0.030303118787999 0.221666666666667 0.336 10.9145176886426 20.5346840204193 0.221666666666667 0.336 0.081011790537715 0.00884161495787013 2.1411401745925 3.99078812561463 O95248 SBF1 O95248.4.T1845.p_SBF1 O95248-4_T1845t _1_1_1845_1845 O95248-4 O95248-4|G5E933 Isoform 4 of Myotubularin-related protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.29671.29671.3 28.2 28.2 4.381 2 1 1 0 887.8031 2581.4311 T1845t TMT10 1831 (K) GVIDLAEVEAVAPGtPTMGAPK (T) GVIDLAEVEAVAPGT(0.99)PT(0.0)MGAPK K:TMT10,t:Phosphorylated T SBF1 213155.5 1 7 1740.1 118.23 HUMAN 1 10.9145 20.5347 VEAVNSDSDSEFGIP-p Q02880;S1524-p VEAVNSDSDSEFGIP 0.823183151542621 0.00589374323619534 0.0473333333333333 0.686666666666667 1.6274606989046 32.2171051638924 0.0473333333333334 0.686666666666667 0.68747028343294 0.000600191006657373 0.424623272336726 7.12368705120403 Q02880 TOP2B Q02880.S1524.p_TOP2B Q02880_S1524s _1_1_1524_1524 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21060.21060.3 22.49 17.71 2.242 3 1 1 0 896.8092 2608.4437 S1524s TMT10 1516 (K) VVEAVNSDsDSEFGIPKK (T) VVEAVNS(0.0)DS(0.99)DS(0.0)EFGIPKK K:TMT10,s:Phosphorylated S TOP2B 184233.7 8 44 71.1 658.36 HUMAN 1 1.6275 32.2171 VECPDADSLNIPDVD-p Q0JRZ9;S312-p VECPDADSLNIPDVD 0.0635370415880919 0.751199828908856 -0.579666666666667 -0.0326666666666666 25.9167437750967 1.71707360410717 -0.579666666666667 -0.0326666666666666 0.00256050496612858 0.673430279314486 -5.27977009180528 -0.445143452621807 Q0JRZ9 FCHO2 Q0JRZ9.S312.p_FCHO2 Q0JRZ9_S312s _1_1_312_312 Q0JRZ9 Q0JRZ9|Q0JRZ9-3 F-BAR domain only protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23061.23061.5 30.68 30.68 7.047 6 1 1 0 933.238 4582.187 S312s TMT10 301 (K) DAESVECPDADsLNIPDVDEEGYSIKPETNQNDTK (E) DAES(0.0)VECPDADS(0.99)LNIPDVDEEGY(0.0)S(0.0)IKPET(0.0)NQNDT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FCHO2 89436.3 4 1 864.1 210.2 HUMAN 1 -25.9167 -1.7171 VEDDIDLSDVELDDL-p Q15084-2;S480-p VEDDIDLSDVELDDL 0.390998527185411 0.0817485237943064 -0.224 0.194 7.5334519372763 14.4159996457667 -0.224 0.194 0.176463466455266 0.0361742916269866 -1.55410523744878 2.76790147745688 Q15084 PDIA6 Q15084.2.S480.p_PDIA6 Q15084-2_S480s _1_1_480_480 Q15084-2 Q15084-2|Q15084-5|Q15084-4 Isoform 2 of Protein disulfide-isomerase A6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34274.34274.4 24.21 21.58 24.213 4 1 1 0 1409.1816 5553.7437 S480s TMT10 445 (R) GSTAPVGGGAFPTIVEREPWDGRDGELPVEDDIDLsDVELDDLGKDEL (-) GS(0.0)T(0.0)APVGGGAFPT(0.0)IVEREPWDGRDGELPVEDDIDLS(0.99)DVELDDLGKDEL K:TMT10,s:Phosphorylated S PDIA6 54413.4 1 1 4983.1 24.21 HUMAN 1 -7.5335 14.416 VEDEDQDSEEEKDND-p Q9Y5T5;S415-p VEDEDQDSEEEKDND 0.859564008462243 0.669069046411955 -0.031 -0.068 1.28337532577691 2.38592357564337 -0.031 -0.0679999999999999 0.744153394955435 0.577308088656209 -0.343523755483814 -0.59259350849859 Q9Y5T5 USP16 Q9Y5T5.S415.p_USP16 Q9Y5T5_S415s _1_1_415_415 Q9Y5T5 Q9Y5T5|Q9Y5T5-2|Q9Y5T5-3|Q9Y5T5-4 Ubiquitin carboxyl-terminal hydrolase 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13363.13363.2 19.99 19.72 5.767 4 1 1 0 1578.2257 3075.4733 S415s TMT10 407 (K) TVEDEDQDsEEEKDNDSYIK (E) T(0.0)VEDEDQDS(0.99)EEEKDNDS(0.0)Y(0.0)IK K:TMT10,s:Phosphorylated S USP16 94994.9 8 2 1229.1 164.17 HUMAN 1 -1.2834 -2.3859 VEDEVPRSPVAEEPG-p Q7L8J4;S30-p VEDEVPRSPVAEEPG 0.800204109337566 0.755431912820812 -0.0353333333333333 0.0373333333333333 1.86464591403889 1.68408437668594 -0.0353333333333334 0.0373333333333333 0.650931679986688 0.678565167352965 -0.478613790149345 0.437597198078637 Q7L8J4 SH3BP5L Q7L8J4.S30.p_SH3BP5L Q7L8J4_S30s _1_1_30_30 Q7L8J4 Q7L8J4 SH3 domain-binding protein 5-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16570.16570.5 25.85 22.44 7.982 6 1 1 0 847.0179 4151.0781 S30s TMT10 12 (R) ETPQGELRPEVVEDEVPRsPVAEEPGGGGSSSSEAK (L) ET(0.0)PQGELRPEVVEDEVPRS(0.99)PVAEEPGGGGS(0.0)S(0.0)S(0.0)S(0.0)EAK K:TMT10,s:Phosphorylated S SH3BP5L 43726.7 2 2 1783.1 115.12 HUMAN 1 -1.8646 1.6841 VEDFHKRTPNRYHLR-p Q9ULW0;T338-p VEDFHKRTPNRYHLR 0.468752455569706 0.00972215440403834 0.134 -0.503 6.07206875830162 28.3318621510062 0.134 -0.503 0.247054702157369 0.00146829657215261 1.29739187698432 -5.93149238455643 Q9ULW0 TPX2 Q9ULW0.T338.p_TPX2 Q9ULW0_T338t _1_1_338_338 Q9ULW0 Q9ULW0-2 Targeting protein for Xklp2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4210.4210.3 9.04 2.87 5.013 2 1 1 0 455.9044 1285.7327 T338t TMT10 338 (R) tPNRYHLR (S) T(0.99)PNRY(0.0)HLR t:Phosphorylated T TPX2 86279.1 2 8 599.1 263.33 HUMAN 1 6.0721 -28.3319 VEDIHCGSMKGTGMR-p P51531;S93-p VEDIHCGSMKGTGMR 0.200797395490016 0.415824994560816 0.518 0.141 13.5496660630652 5.06938813015171 0.518 0.141 0.0441604401814415 0.311215477222594 2.61060159326659 1.11653044808674 P51531 SMARCA2 P51531.S93.p_SMARCA2 P51531_S93s _1_1_93_93 P51531 P51531|P51531-2|F6VDE0|A0A0U1RQZ9|A0A1B0GU54|A0A1B0GWA8 Probable global transcription activator SNF2L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14713.14713.3 10.2 10.2 99 1 1 1 0 628.6445 1803.9497 S93s TMT10 84 (K) GIVEDIHCGsMK (G) GIVEDIHCGS(1.0)MK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SMARCA2 181903.8 1 19 392.2 331.85 HUMAN 1 13.5497 5.0694 VEDNDNDSEMERPVN-p P42568;S429-p VEDNDNDSEMERPVN 0.355041707442532 0.0839862586956737 -0.547 -0.243666666666667 8.35665692298114 14.2435208511651 -0.547 -0.243666666666667 0.145993764686547 0.0376398526735906 -1.69698154318104 -2.73606388235073 P42568 MLLT3 P42568.S429.p_MLLT3 P42568_S412sS419sS429s_3_3_412_429 P42568 P42568|P42568-2|B1APT5|A0A0D9SF09 Protein AF-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7339.7339.4 11.27 11.27 99 3 3 3 0 980.3572 3662.5106 S412s S419s S429s M431m TMT10 409 (K) DLHsDDNEEEsDEVEDNDNDsEmERPVNR (G) DLHS(1.0)DDNEEES(1.0)DEVEDNDNDS(1.0)EM(1.0)ERPVNR s:Phosphorylated S,m:Oxidized methionine MLLT3 63692.6 1 6 2734.1 72.29 HUMAN 1 -8.3567 -14.2435 VEDTETLSVSGIPNA-p Q96GE4;S243-p VEDTETLSVSGIPNA 0.274203367926357 0.712278201326522 0.157333333333333 0.0353333333333334 10.6368419293576 2.0269354406673 0.157333333333333 0.0353333333333334 0.0863606310372644 0.627056185062268 2.09260217107545 0.514698802009233 Q96GE4 CEP95 Q96GE4.S243.p_CEP95 Q96GE4_S243s _1_1_243_243 Q96GE4 Q96GE4 Centrosomal protein of 95 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22902.22902.3 12.57 12.57 1.115 6 1 1 0 778.0452 2252.1608 S243s TMT10 233 (R) TSFVEDTETLsVSGIPNAR (K) T(0.0)S(0.0)FVEDT(0.0)ET(0.0)LS(0.99)VS(0.0)GIPNAR s:Phosphorylated S CEP95 95922.6 1 2 2407.1 84.85 HUMAN 1 10.6368 2.0269 VEEAHAASTEEKEAG-p Q96C86;S24-p VEEAHAASTEEKEAG 0.897911962932873 0.151435219300912 0.0243333333333333 -0.242 0.917373306800783 10.7796528253386 0.0243333333333333 -0.242 0.809585403330122 0.0835669818939655 0.253022009349961 -2.11661729319864 Q96C86 DCPS Q96C86.S24.p_DCPS Q96C86_S24s _1_1_24_24 Q96C86 Q96C86 m7GpppX diphosphatase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8568.8568.3 8.08 8.08 1.13 2 1 1 0 656.299 1886.9181 S24s Hydrogen 14 (R) ELDVEEAHAAsTEEK (E) ELDVEEAHAAS(0.99)T(0.0)EEK K:TMT10-Lys-Only,s:Phosphorylated S DCPS 38779.2 2 1 5225.1 21.57 HUMAN 1 0.9174 -10.7797 VEEDAEDSGEADDEE-p O75717;S868-p VEEDAEDSGEADDEE 0.406655799519635 0.201973299909922 0.126666666666667 -0.151333333333333 7.21763667036191 9.13912604535009 0.126666666666667 -0.151333333333333 0.189773834537812 0.121923492758365 1.49905816309239 -1.83177893460329 O75717 WDHD1 O75717.S868.p_WDHD1 O75717_S868s _1_1_868_868 O75717 O75717|O75717-2 WD repeat and HMG-box DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12568.12568.5 18.97 18.97 18.974 3 1 1 0 846.0023 4145.999 S868s Hydrogen 859 (R) NQVEEDAEDsGEADDEEKPEIHKPGQNSFSK (S) NQVEEDAEDS(0.99)GEADDEEKPEIHKPGQNS(0.0)FS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S WDHD1 127448.5 6 8 554.1 273.24 HUMAN 1 7.2176 -9.1391 VEEDDYPSEELLEDE-p Q5JRA6;S727-p VEEDDYPSEELLEDE 0.913243271805206 0.0503590637942873 -0.0193333333333333 0.348666666666667 0.768342338059482 17.3467057601839 -0.0193333333333333 0.348666666666667 0.837849020337932 0.018421688059613 -0.21471556667807 3.32863519386416 Q5JRA6 MIA3 Q5JRA6.S727.p_MIA3 Q5JRA6_S727s _1_1_727_727 Q5JRA6 Q5JRA6|Q5JRA6-2 Transport and Golgi organization protein 1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28837.28837.4 24.68 24.68 1.859 8 1 1 0 1399.9165 5516.663 S727s TMT10 696 (K) AMQGTEVGQTDQTDSTGGPAFLSKVEEDDYPsEELLEDENAINAK (R) AMQGT(0.0)EVGQT(0.0)DQT(0.0)DS(0.0)T(0.0)GGPAFLS(0.0)KVEEDDY(0.0)PS(0.99)EELLEDENAINAK K:TMT10,s:Phosphorylated S MIA3 214383.2 3 2 378.1 336.1 HUMAN 1 -0.7683 17.3467 VEEEDKMTPEQLAIK-p O00487;T266-p VEEEDKMTPEQLAIK 0.909891750490786 0.0595381450649607 0.0183333333333333 0.256666666666667 0.804052362711588 16.3248925348987 0.0183333333333333 0.256666666666667 0.830988021794764 0.0233083079040362 0.223978045380572 3.12855775809516 O00487 PSMD14 O00487.T266.p_PSMD14 O00487_T266t _1_1_266_266 O00487 O00487 26S proteasome non-ATPase regulatory subunit 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19138.19138.3 14.83 9.51 99 1 1 1 0 866.7952 2518.4042 T266t TMT10 258 (K) AVEEEDKMtPEQLAIK (N) AVEEEDKMT(1.0)PEQLAIK K:TMT10,t:Phosphorylated T PSMD14 34747.6 1 2 4038.1 38.76 HUMAN 1 0.8041 16.3249 VEENKKMSQPGSPSP-p F5GWX5;S1524-p VEENKKMSQPGSPSP 0.341848649788872 0.0033889360602677 0.246 0.706 8.66271072068861 36.9328938515959 0.246 0.706 0.136059517944015 0.000202633205572265 1.74997720503208 8.83377394780178 F5GWX5 CHD4 F5GWX5.S1524.p_CHD4 F5GWX5_S1524s _1_1_1524_1524 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8524.8524.3 11.91 11.91 2.039 3 1 1 0 637.6841 1831.0715 S1524s TMT10 1522 (K) KMsQPGSPSPK (T) KMS(0.99)QPGS(0.0)PS(0.0)PK K:TMT10,s:Phosphorylated S CHD4 218583 3 18 49.1 753.68 HUMAN 1 8.6627 36.9329 VEENSVRSPRKSPRL-p Q92576;S125-p VEENSVRSPRKSPRL 0.149285094777406 0.0180808360969756 -0.326666666666667 -0.522666666666667 16.6432151976139 23.9997942656358 -0.326666666666667 -0.522666666666667 0.0216609988968381 0.00398126030168122 -3.19268951365544 -4.78916658338831 Q92576 PHF3 Q92576.S125.p_PHF3 Q92576_S125s _1_1_125_125 Q92576 Q92576|Q92576-2|D6R9X2 PHD finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.5486.5486.5 9.66 6.6 3.631 2 1 1 0 463.0594 2231.3075 S125s TMT10 116 (R) DKVEENSVRsPRK (S) DKVEENS(0.0)VRS(0.99)PRK K:TMT10,s:Phosphorylated S PHF3 231702.4 2 1 96.1 606.54 HUMAN 1 -16.6432 -23.9998 VEEPTDDSLPTTGDA-p Q9UKN8;S652-p VEEPTDDSLPTTGDA 0.142182452039862 0.231525133455994 0.252333333333333 -0.163333333333333 17.3129097639195 8.37016824595981 0.252333333333333 -0.163333333333333 0.0185656014689201 0.145540269709634 3.32452142129171 -1.69875698394416 Q9UKN8 GTF3C4 Q9UKN8.S652.p_GTF3C4 Q9UKN8_S652s _1_1_652_652 Q9UKN8 Q9UKN8 General transcription factor 3C polypeptide 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13232.13232.4 21.02 13.67 1.832 5 1 1 0 961.7068 3763.8423 S652s TMT10 640 (R) SKEGDVEEPTDDsLPTTGDAGGREPMEEK (L) S(0.0)KEGDVEEPT(0.0)DDS(0.99)LPT(0.0)T(0.0)GDAGGREPMEEK K:TMT10,s:Phosphorylated S GTF3C4 93292.9 2 4 1958.1 105.19 HUMAN 1 17.3129 -8.3702 VEESSEISPEPKTEM-p O94782;S475-p VEESSEISPEPKTEM 0.787307528272418 0.00804694966393841 0.061 -0.847 2.00531891523585 29.8388283648201 0.061 -0.847 0.630185067945138 0.00103780835692476 0.509979630195 -6.37320567811574 O94782 USP1 O94782.S475.p_USP1 O94782_S475s _1_1_475_475 O94782 O94782 Ubiquitin carboxyl-terminal hydrolase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24011.24011.4 21.61 16.21 1.103 5 1 1 0 1054.0372 4133.1381 S475s TMT10 450 (R) REDFQDISVPVQEDELSKVEESSEIsPEPK (T) REDFQDIS(0.0)VPVQEDELS(0.0)KVEES(0.0)S(0.0)EIS(0.99)PEPK K:TMT10,s:Phosphorylated S USP1 89232.6 3 6 1052.1 182.92 HUMAN 1 2.0053 -29.8388 VEESSVKSDNGDEKA-p Q8WXH0;S4126-p VEESSVKSDNGDEKA 0.353670778447798 0.00451531595404895 -0.192 0.542333333333333 8.38826324506794 34.3998321121325 -0.192 0.542333333333333 0.144935133703898 0.000363092090771272 -1.7024561149842 7.8758639883542 Q8WXH0 SYNE2 Q8WXH0.S4126.p_SYNE2 Q8WXH0_S4126s _1_1_4126_4126 Q8WXH0 Q8WXH0-2|A0A0C4DGK3|Q8WXH0-7 Nesprin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29525.29525.3 10.87 10.87 1.199 6 1 1 0 1186.2375 3476.7194 S4126s TMT10 4107 (R) GSMSYLAAVEEEVEESSVKsDNGDEK (A) GS(0.0)MS(0.0)Y(0.0)LAAVEEEVEES(0.0)S(0.0)VKS(0.99)DNGDEK K:TMT10,s:Phosphorylated S SYNE2 802304.8 3 10 188.1 472.65 HUMAN 1 -8.3883 34.3998 VEETDRPSPEPSNEA-p Q5TC84;S381-p VEETDRPSPEPSNEA 0.481480099571685 0.0735249969700804 -0.097 -0.347 5.84268221348605 15.05013450394 -0.097 -0.347 0.260454448003991 0.0312598255182968 -1.25648757740482 -2.88596829915755 Q5TC84 OGFRL1 Q5TC84.S381.p_OGFRL1 Q5TC84_S381s _1_1_381_381 Q5TC84 Q5TC84 Opioid growth factor receptor-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9479.9479.5 14.2 10.02 2.372 3 1 1 0 700.369 3417.8581 S381s TMT10 368 (K) VAPKEPVEETDRPsPEPSNEAAKPR (N) VAPKEPVEET(0.0)DRPS(0.99)PEPS(0.0)NEAAKPR K:TMT10,s:Phosphorylated S OGFRL1 51364.9 2 1 5449.1 19.19 HUMAN 1 -5.8427 -15.0501 VEEVCRKYNTDCVQG-p A0A0A0MT26;Y45-p VEEVCRKYNTDCVQG 0.451918168214605 0.0980251176247104 -0.24 -0.744 6.36602484898271 13.334717880256 -0.24 -0.744 0.230885954949189 0.0464010931372088 -1.34951596329366 -2.57010612162372 A0A0A0MT26 NotFound A0A0A0MT26.Y45.p_NotFound A0A0A0MT26_Y45y _1_1_45_45 A0A0A0MT26 A0A0A0MT26|P13637-3|P13637-2|M0R116 Sodium/potassium-transporting ATPase subunit alpha-3 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.12197.12197.3 20.15 20.15 1.813 4 1 1 0 687.6664 1981.0213 Y45y TMT10 45 (K) yNTDCVQGLTHSK (A) Y(0.99)NT(0.0)DCVQGLT(0.0)HS(0.0)K C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y ATP1A3 135254.4 1 1 169.1 20.15 HUMAN 1 -6.366 -13.3347 VEFQRAQSLLSTDRE-p O00231-2;S14-p VEFQRAQSLLSTDRE 0.641038070918298 0.189261458943136 0.067 0.181333333333333 3.60600886352673 9.5074337741734 0.067 0.181333333333333 0.435912290069359 0.112009954955693 0.841026527321043 1.89552224148343 O00231 PSMD11 O00231.2.S14.p_PSMD11 O00231-2_S14s _1_1_14_14 O00231-2 O00231-2 Isoform 2 of 26S proteasome non-ATPase regulatory subunit 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26620.26620.5 17.05 17.05 4.008 5 1 1 0 598.9365 2910.6777 S14s TMT10 12 (R) AQsLLSTDREASIDILHSIVKR (D) AQS(0.99)LLS(0.0)T(0.0)DREAS(0.0)IDILHS(0.0)IVKR K:TMT10,s:Phosphorylated S PSMD11 47819.3 5 1 2992.1 63.85 HUMAN 1 3.606 9.5074 VEFSDLESEDDERPR-p Q9HCK8;S1424-p VEFSDLESEDDERPR 0.985606509431769 0.0923029493480819 0.00299999999999999 0.23 0.127355798716282 13.6874483346731 0.00299999999999999 0.23 0.971101042009099 0.0427814171397814 0.03793325673724 2.63417298919789 Q9HCK8 CHD8 Q9HCK8.S1424.p_CHD8 Q9HCK8_S1424s _1_1_1424_1424 Q9HCK8 Q9HCK8|Q9HCK8-2 Chromodomain-helicase-DNA-binding protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20524.20524.4 21.2 21.82 1.706 4 1 1 0 883.9243 3452.6858 S1424s TMT10 1407 (R) HFSTLKDDDLVEFSDLEsEDDERPR (S) HFS(0.0)T(0.0)LKDDDLVEFS(0.0)DLES(0.99)EDDERPR K:TMT10,s:Phosphorylated S CHD8 292339.6 3 2 419.1 320.67 HUMAN 1 0.1274 13.6874 VEGDAAETPPRPRTP-p Q02750;T286-p VEGDAAETPPRPRTP 0.340143533282251 0.0137503593657088 -0.195333333333333 -0.415666666666667 8.71175575437907 25.8622758663351 -0.195333333333333 -0.415666666666667 0.134531636311909 0.00259282027075728 -1.75846737163199 -5.2586719131064 Q02750 MAP2K1 Q02750.T286.p_MAP2K1 Q02750_T286t _1_1_286_286 Q02750 Q02750|Q02750-2|H3BRW9 Dual specificity mitogen-activated protein kinase kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24531.24531.3 25.24 17.21 99 1 1 1 0 937.7729 2731.3381 T286t TMT10 270 (K) ELELMFGCQVEGDAAEtPPRPR (T) ELELMFGCQVEGDAAET(1.0)PPRPR C:Carbamidomethylation,t:Phosphorylated T MAP2K1 43780.6 2 8 1640.2 124.72 HUMAN 1 -8.7118 -25.8623 VEGLRRQSPPASGEV-p Q969X0;S107-p VEGLRRQSPPASGEV 0.787687768114672 0.214427967317373 -0.0393333333333333 -0.167666666666667 2.00163034038606 8.7975326448479 -0.0393333333333333 -0.167666666666667 0.630720527706002 0.131900589191143 -0.509163060604518 -1.77269344850054 Q969X0 RILPL2 Q969X0.S107.p_RILPL2 Q969X0_S107s _1_1_107_107 Q969X0 Q969X0 RILP-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10203.10203.3 15.16 11.77 3.149 2 1 1 0 730.3875 2109.1817 S107s TMT10 105 (R) RQsPPASGEVNLGPNK (M) RQS(0.99)PPAS(0.0)GEVNLGPNK K:TMT10,s:Phosphorylated S RILPL2 24042.8 2 1 5937.1 15.16 HUMAN 1 -2.0016 -8.7975 VEHLETKSLPSRSPP-p P26045;S367-p VEHLETKSLPSRSPP 0.398383907271419 0.968675141143769 -0.125333333333333 -0.00533333333333332 7.37755148933573 0.195611511227651 -0.125333333333333 -0.00533333333333332 0.182913117211753 0.955958081230748 -1.52695307831409 -0.0578266122045081 P26045 PTPN3 P26045.S367.p_PTPN3 P26045_S367sS372s_2_2_367_372 P26045 P26045|J3KN34|P26045-2 Tyrosine-protein phosphatase non-receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18497.18497.3 10.8 6.09 1.142 4 2 2 0 666.3246 1837.0282 S367s S372s TMT10 367 (K) sLPSRsPPITPNWR (S) S(0.99)LPS(0.0)RS(0.99)PPIT(0.0)PNWR s:Phosphorylated S PTPN3 105129.1 4 11 1253.1 161.68 HUMAN 1 -7.3776 -0.1956 VEHNQSYSQAGITET-p P42167;S224-p VEHNQSYSQAGITET 0.244343799265202 0.00574309532821293 0.173666666666667 -0.651333333333333 11.7068592430366 32.4355534987113 0.173666666666667 -0.651333333333333 0.0675016013366209 0.000570748330923987 2.28044493451131 -7.19611985836691 P42167 TMPO P42167.S224.p_TMPO P42167_S224s _1_1_224_224 P42167 P42167 Lamina-associated polypeptide 2, isoforms beta/gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15185.15185.3 13.43 13.43 1.236 9 1 1 0 1022.1506 2984.4638 S224s TMT10 217 (R) VEHNQSYsQAGITETEWTSGSSK (G) VEHNQS(0.0)Y(0.0)S(0.99)QAGIT(0.0)ET(0.0)EWT(0.0)S(0.0)GS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S TMPO 50726.4 3 35 123.2 546.19 HUMAN 1 11.7069 -32.4356 VEIIRMASIYSEEGN-p O95630;S48-p VEIIRMASIYSEEGN 0.33998245451028 0.732600121777713 -0.248666666666667 0.0586666666666667 8.71884182975904 1.86328463239149 -0.248666666666667 0.0586666666666667 0.134312309550624 0.651135744342529 -1.75969401055263 0.478253807826433 O95630 STAMBP O95630.S48.p_STAMBP O95630_S48s _1_1_48_48 O95630 O95630|O95630-2|F5H5B9 STAM-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30761.30761.4 16.58 16.58 1.112 4 1 1 0 717.6087 2787.4428 S48s TMT10 46 (R) MAsIYSEEGNIEHAFILYNK (Y) MAS(0.99)IY(0.0)S(0.0)EEGNIEHAFILY(0.0)NK K:TMT10,s:Phosphorylated S STAMBP 48646.6 2 2 3133.1 59.85 HUMAN 1 -8.7188 1.8633 VEKERASTPYIEKQV-p Q969Z0;T65-p VEKERASTPYIEKQV 0.329350427440409 0.313625645448824 0.153666666666667 -0.129666666666667 9.01685787773791 6.657886240875 0.153666666666667 -0.129666666666667 0.125404815112708 0.215879486275898 1.81128114774559 -1.40061664671674 Q969Z0 TBRG4 Q969Z0.T65.p_TBRG4 Q969Z0_T65t _1_1_65_65 Q969Z0 Q969Z0|Q969Z0-2 Protein TBRG4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12865.12865.2 11.18 6.6 1.407 3 1 1 0 723.8853 1366.7982 T65t TMT10 63 (R) AStPYIEK (Q) AS(0.0)T(0.99)PY(0.0)IEK K:TMT10,t:Phosphorylated T TBRG4 71193.2 7 1 5770.1 16.43 HUMAN 1 9.0169 -6.6579 VEKGTGDSLRESKVN-p Q05519-2;S463-p VEKGTGDSLRESKVN 0.544632492505997 0.0222971670100091 -0.18 0.384 4.87290048429304 22.5614810098407 -0.18 0.384 0.325619159966968 0.00554436609450267 -1.08071416231521 4.44666266306002 Q05519 SRSF11 Q05519.2.S463.p_SRSF11 Q05519-2_S463s _1_1_463_463 Q05519-2 Q05519|Q05519-2|Q5T757 Isoform 2 of Serine/arginine-rich splicing factor 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6140.6140.3 9.06 9.06 1.422 3 1 1 0 529.9438 1507.848 S463s TMT10 459 (K) GTGDsLRESK (V) GT(0.0)GDS(0.99)LRES(0.0)K K:TMT10,s:Phosphorylated S SRSF11 53527.2 3 11 185.1 475.04 HUMAN 1 -4.8729 22.5615 VEKKARRSEQKDPLE-p Q9H9J4;S1181-p VEKKARRSEQKDPLE 0.39120743112417 0.126626488456249 -0.207666666666667 -0.173666666666667 7.51875375506159 11.8307666707663 -0.207666666666667 -0.173666666666667 0.177061697901896 0.0656029445583188 -1.55154700041012 -2.30122361742657 Q9H9J4 USP42 Q9H9J4.S1181.p_USP42 Q9H9J4_S1181s _1_1_1181_1181 Q9H9J4 Q9H9J4|Q9H9J4-2 Ubiquitin carboxyl-terminal hydrolase 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8442.8442.3 13.02 6.55 99 1 1 1 0 665.3502 1914.0697 S1181s Hydrogen 1180 (R) RsEQKDPLEEPK (A) RS(1.0)EQKDPLEEPK K:TMT10-Lys-Only,s:Phosphorylated S USP42 146872.9 4 11 255.1 399.37 HUMAN 1 -7.5188 -11.8308 VEKLTHLSYKEVPTA-p Q96KN1;S12-p VEKLTHLSYKEVPTA 0.319825102614354 0.848834864220896 -0.16 0.0280000000000001 9.27031456519884 0.999616557658641 -0.16 0.0280000000000001 0.118295586957427 0.794398369744871 -1.85516624770214 0.273755280176362 Q96KN1 FAM84B Q96KN1.S12.p_FAM84B Q96KN1_S12s _1_1_12_12 Q96KN1 Q96KN1 Protein FAM84B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16076.16076.5 10.21 10.21 2.896 5 1 1 0 636.3242 3097.6318 S12s TMT10 8 (K) LTHLsYKEVPTADPTGVDRDDGPR (I) LT(0.0)HLS(0.99)Y(0.0)KEVPT(0.0)ADPT(0.0)GVDRDDGPR K:TMT10,s:Phosphorylated S FAM84B 34701.9 3 1 1802.1 114.13 HUMAN 1 -9.2703 0.9996 VEKLVRSSPHGKHGN-p P46109;S185-p VEKLVRSSPHGKHGN 0.14415361707016 0.0442362330576431 -0.493 -0.259 17.1735760060165 18.1342714644811 -0.493 -0.259 0.019170895479204 0.0153664254580776 -3.29690064220372 -3.48660909115375 P46109 CRKL P46109.S185.p_CRKL P46109_S185s _1_1_185_185 P46109 P46109 Crk-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5226.5226.3 11.24 11.24 1.359 2 1 1 0 506.9571 1438.8895 S185s TMT10 181 (K) LVRSsPHGK (H) LVRS(0.0)S(0.99)PHGK K:TMT10,s:Phosphorylated S CRKL 33890.5 3 2 2097.1 97.7 HUMAN 1 -17.1736 -18.1343 VEKNSTPSEPGSGRG-p P51858;S202-p VEKNSTPSEPGSGRG 0.444850821523227 0.00457608170970566 0.109333333333333 0.712333333333333 6.48285289853694 34.2467268078564 0.109333333333333 0.712333333333333 0.224757767765272 0.000376120772323503 1.37014968309149 7.82098344019108 P51858 HDGF P51858.S202.p_HDGF P51858_S202s _1_1_202_202 P51858 P51858-3|P51858-2 Hepatoma-derived growth factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14057.14057.5 22.63 22.63 1.28 6 1 1 0 1047.0653 5151.3311 S202s TMT10 198 (K) NSTPsEPGSGRGPPQEEEEEEDEEEEATKEDAEAPGIRDHESL (-) NS(0.0)T(0.0)PS(0.99)EPGS(0.0)GRGPPQEEEEEEDEEEEAT(0.0)KEDAEAPGIRDHES(0.0)L K:TMT10,s:Phosphorylated S HDGF 26901.9 2 7 213.1 437.7 HUMAN 1 6.4829 34.2467 VEKNYTNSPEESSKA-p Q9P2X3;S297-p VEKNYTNSPEESSKA 0.862029975440239 0.160822297671947 -0.029 0.210666666666667 1.26193180651825 10.438279947203 -0.029 0.210666666666667 0.747836777583264 0.0904007441117853 -0.338349469459931 2.05709499319877 Q9P2X3 IMPACT Q9P2X3.S297.p_IMPACT Q9P2X3_S297s _1_1_297_297 Q9P2X3 Q9P2X3|Q9P2X3-2 Protein IMPACT HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7210.7210.2 14.54 14.54 2.385 5 1 1 0 897.4216 1713.8696 S297s TMT10 293 (K) NYTNsPEESSK (A) NY(0.0)T(0.0)NS(0.99)PEES(0.0)S(0.0)K K:TMT10,s:Phosphorylated S IMPACT 37046.4 2 1 6031.1 14.54 HUMAN 1 -1.2619 10.4383 VEKQMNMSPPPGNAG-p Q86U42;S150-p VEKQMNMSPPPGNAG 0.74072493450572 0.715223919606163 -0.048 0.036 2.47307585553617 2.00285699288728 -0.048 0.036 0.565838396623502 0.630542407629821 -0.611194164409295 0.509375477171799 Q86U42 PABPN1 Q86U42.S150.p_PABPN1 Q86U42_S150s _1_1_150_150 Q86U42 Q92843-2|Q86U42|Q86U42-2|G3V4T2|B4DEH8 Polyadenylate-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.33501.33696.4 22.3 17.86 20.137 2 1 1 0 860.4119 3358.6668 S150s TMT10 146 (K) QMNMsPPPGNAGPVIMSIEEKMEADAR (S) Q(0.0)M(0.0)N(0.0)M(0.0)S(0.99)PPPGN(0.0)AGPVIM(0.0)S(0.0)IEEKM(0.0)EADAR K:TMT10,s:Phosphorylated S PABPN1 32862.6 95 4 1523.1 134.21 HUMAN 1 -2.4731 2.0029 VEKSQSASVESIPEV-p Q92538-3;S349-p VEKSQSASVESIPEV 0.908751475442159 0.148903823333033 -0.0176666666666667 0.153 0.816825874834978 10.887870773718 -0.0176666666666667 0.153 0.82854750243064 0.0815103809032263 -0.227278192134467 2.13552511899659 Q92538 GBF1 Q92538.3.S349.p_GBF1 Q92538-3_S349sS352s_2_2_349_352 Q92538-3 Q92538|Q92538-2|Q92538-3 Isoform 3 of Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23856.23856.4 18.91 19.78 1.161 10 2 2 0 1109.4726 4274.9291 S349s S352s TMT10 345 (K) SQSAsVEsIPEVLEECTSPADHSDSASVHDMDYVNPR (G) S(0.0)QS(0.0)AS(0.99)VES(0.99)IPEVLEECT(0.0)S(0.0)PADHS(0.0)DS(0.0)AS(0.0)VHDMDY(0.0)VNPR C:Carbamidomethylation,s:Phosphorylated S GBF1 208066.7 4 16 543.1 276.05 HUMAN 1 -0.8168 10.8879 VEKYDGESDKEQFDD-p Q08AD1;S1148-p VEKYDGESDKEQFDD 0.251354731881757 0.0766010107693251 -0.332333333333333 0.216666666666667 11.4419048713773 14.8058210457837 -0.332333333333333 0.216666666666667 0.0717479526511016 0.0330687588741962 -2.23371672851769 2.84028741977893 Q08AD1 CAMSAP2 Q08AD1.S1148.p_CAMSAP2 Q08AD1_S1148s _1_1_1148_1148 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16214.16214.5 20.73 20.73 11.294 2 1 1 0 711.5533 3473.773 S1148s TMT10 1137 (K) ADVPVEKYDGEsDKEQFDDDQK (V) ADVPVEKY(0.0)DGES(0.99)DKEQFDDDQK K:TMT10,s:Phosphorylated S CAMSAP2 169284 4 22 28.2 931.95 HUMAN 1 -11.4419 14.8058 VEKYRPASASVSALI-p P46108-2;S194-p VEKYRPASASVSALI 0.0995388440058061 0.0205344648135939 -0.764 -0.486666666666667 21.198474652411 23.0930594640617 -0.764 -0.486666666666667 0.00758844052672121 0.0049056216922649 -4.14100798639691 -4.57131448494648 P46108 CRK P46108.2.S194.p_CRK P46108-2_S194s _1_1_194_194 P46108-2 P46108-2 Isoform Crk-I of Adapter molecule crk HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17942.17942.3 12.07 12.07 2.259 4 1 1 0 605.3234 1733.986 S194s TMT10 190 (K) YRPAsASVSALIGGR (-) Y(0.0)RPAS(0.99)AS(0.0)VS(0.0)ALIGGR s:Phosphorylated S CRK 22905.1 1 9 1891.2 108.77 HUMAN 1 -21.1985 -23.0931 VELIYLVSKRCHECL-p O95377;S210-p VELIYLVSKRCHECL 0.670375570853073 0.537368442469625 -0.0626666666666667 0.0703333333333333 3.25219713597614 3.62885729893957 -0.0626666666666667 0.0703333333333333 0.472911947900693 0.43362495732182 -0.771186993394344 0.845351746558227 O95377 GJB5 O95377.S210.p_GJB5 O95377_S181sS210s_2_2_181_210 O95377 O95377 Gap junction beta-5 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.33810.33810.5 8.04 2.96 1.244 5 2 2 0 895.0841 4311.5083 S181s S210s TMT10 180 (K) PsEKNIFTLFMVATAAICILLNLVELIYLVsK (R) PS(0.99)EKNIFT(0.0)LFMVAT(0.0)AAICILLNLVELIY(0.0)LVS(0.99)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S GJB5 31829.4 1 1 7042.1 8.04 HUMAN 1 -3.2522 3.6289 VELKRAVSREDSARP-p Q13151;S84-p VELKRAVSREDSARP 0.0395731079578075 0.980820363902604 1.581 -0.00366666666666665 31.3518198770168 0.12012175284196 1.581 -0.00366666666666664 0.000732517513088715 0.97271995355277 6.85419697959712 -0.03580386855251 Q13151 HNRNPA0 Q13151.S84.p_HNRNPA0 Q13151_S84s _1_1_84_84 Q13151 Q13151 Heterogeneous nuclear ribonucleoprotein A0 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3319.3319.4 9.59 9.59 6.651 2 1 1 0 523.2796 2010.1245 S84s TMT10 82 (R) AVsREDSARPGAHAK (V) AVS(0.99)REDS(0.0)ARPGAHAK K:TMT10,s:Phosphorylated S HNRNPA0 31011.2 1 3 2372.1 86.26 HUMAN 1 31.3518 -0.1201 VELLREASAESDVGK-p P28290;S641-p VELLREASAESDVGK 0.525402922989827 0.820092241758375 0.14 -0.0263333333333333 5.17001523619723 1.20578711973978 0.14 -0.0263333333333333 0.304087435746734 0.7575674181327 1.13512496423893 -0.324697216033752 P28290 SSFA2 P28290.S641.p_SSFA2 P28290_S641s _1_1_641_641 P28290 P28290|P28290-3|E9PHV5|P28290-2|E7EUL7 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8625.8625.2 10.98 10.98 2.252 2 1 1 0 765.8754 1450.779 S641s TMT10 639 (R) EAsAESDVGK (S) EAS(0.99)AES(0.0)DVGK K:TMT10,s:Phosphorylated S SSFA2 139638.7 2 15 73.1 652.35 HUMAN 1 5.17 -1.2058 VELPTEPSLVYEAVC-p Q9Y572;S227-p VELPTEPSLVYEAVC 0.156870667579318 0.533101188866895 0.273 -0.0786666666666666 16.1422914832082 3.6733486293388 0.273 -0.0786666666666666 0.0243092103524108 0.429205360182236 3.09555961562836 -0.854014966795145 Q9Y572 RIPK3 Q9Y572.S227.p_RIPK3 Q9Y572_S227s _1_1_227_227 Q9Y572 Q9Y572 Receptor-interacting serine/threonine-protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.29209.29209.3 11.24 11.24 3.05 3 1 1 0 805.3866 2334.1849 S227s TMT10 219 (R) EVELPTEPsLVYEAVCNR (Q) EVELPT(0.0)EPS(0.99)LVY(0.0)EAVCNR C:Carbamidomethylation,s:Phosphorylated S RIPK3 57399.7 1 1 3189.1 58.17 HUMAN 1 16.1423 -3.6733 VELRRVQSLPSVPLS-p Q96AD5;S404-p VELRRVQSLPSVPLS 0.93826736953178 0.0726255425534699 -0.0123333333333333 0.262666666666667 0.539131068462003 15.1356552486613 -0.0123333333333333 0.262666666666667 0.88325660373325 0.0306502820356544 -0.153911820082352 2.90201762967918 Q96AD5 PNPLA2 Q96AD5.S404.p_PNPLA2 Q96AD5_S404s _1_1_404_404 Q96AD5 Q96AD5|Q96AD5-2 Patatin-like phospholipase domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18945.18945.3 15.26 15.26 3.025 4 1 1 0 705.0335 2033.1163 S404s TMT10 401 (R) RVQsLPSVPLSCAAYR (E) RVQS(0.99)LPS(0.0)VPLS(0.0)CAAY(0.0)R C:Carbamidomethylation,s:Phosphorylated S PNPLA2 55999.6 10 1 3262.1 55.62 HUMAN 1 -0.5391 15.1357 VELRSYVSEPELATL-p E9PKC0;S986-p VELRSYVSEPELATL 0.564969684752459 0.437876785147174 0.0786666666666667 -0.082 4.56829613972695 4.77811657429107 0.0786666666666667 -0.082 0.349277319987898 0.332803850644755 1.02431646381764 -1.06302855256267 E9PKC0 PLEKHA7 E9PKC0.S986.p_PLEKHA7 E9PKC0_S986s _1_1_986_986 E9PKC0 E9PKC0|Q6IQ23-2|Q6IQ23-3 Pleckstrin homology domain-containing family A member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.31370.31370.3 28.03 26.91 2.184 7 1 1 0 1067.1851 3119.5768 S986s TMT10 983 (R) SYVsEPELATLSGDMAQPSLGLVGPESR (Y) S(0.0)Y(0.0)VS(0.99)EPELAT(0.0)LS(0.0)GDMAQPS(0.0)LGLVGPES(0.0)R s:Phosphorylated S PLEKHA7 144991.9 9 11 809.1 221.2 HUMAN 1 4.5683 -4.7781 VEMKNDKSEEEQSSS-p P07910-2;S220-p VEMKNDKSEEEQSSS 0.470423731861295 0.00383473386221413 -0.206666666666667 0.649 6.04432550822891 35.7841847438728 -0.206666666666667 0.649 0.248637968758164 0.000263986383019806 -1.29245597443997 8.38742739811137 P07910 HNRNPC P07910.2.S220.p_HNRNPC P07910-2_S220s _1_1_220_220 P07910-2 P07910|P07910-2|B2R5W2|B4DY08|P07910-4|P07910-3 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9843.9843.3 20.07 15.75 3.274 5 1 1 0 1079.5529 3156.6864 S220s TMT10 211 (K) QAVEMKNDKsEEEQSSSSVK (K) Q(0.0)AVEM(0.0)KN(0.0)DKS(0.99)EEEQS(0.0)S(0.0)S(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S HNRNPC 32394 46 18 261.1 397.39 HUMAN 1 -6.0443 35.7842 VEMPRQNSDPTSENP-p Q9UKE5;S640-p VEMPRQNSDPTSENP 0.80807182605208 0.423177439185296 -0.0376666666666667 0.083 1.77729825705126 4.97231005366267 -0.0376666666666667 0.083 0.664156112967391 0.318250426714282 -0.458898132578438 1.09876028273095 Q9UKE5 TNIK Q9UKE5.S640.p_TNIK Q9UKE5_S640s _1_1_640_640 Q9UKE5 Q9UKE5|Q9UKE5-4|Q9UKE5-2|Q9UKE5-6|Q9UKE5-3|Q9UKE5-7|Q9UKE5-5|Q9UKE5-8 TRAF2 and NCK-interacting protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15230.15230.3 18.54 18.54 2.987 4 1 1 0 854.4373 2481.3349 S640s TMT10 638 (R) QNsDPTSENPPLPTRIEK (F) QNS(0.99)DPT(0.0)S(0.0)ENPPLPT(0.0)RIEK K:TMT10,s:Phosphorylated S TNIK 155453.9 15 36 131.1 535.29 HUMAN 1 -1.7773 4.9723 VENFDEASKNEAN__-p Q96K17;S153-p VENFDEASKNEAN__ 0.791063298485563 0.0897705007934115 -0.039 0.220666666666667 1.96489770958372 13.8549928143446 -0.039 0.220666666666667 0.636077786352805 0.0411624028358154 -0.501014277591413 2.66475485494824 Q96K17 BTF3L4 Q96K17.S153.p_BTF3L4 Q96K17_S153s_1_1_153_153 Q96K17 Q96K17|Q96K17-2 Transcription factor BTF3 homolog 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25225.25225.4 17.25 11.83 0.493 1 1 1 0 1032.9878 4046.9445 N148n S153s N155n TMT10 129 (K) APKPEDIDEEDDDVPDLVEnFDEAsKnEAN (-) APKPEDIDEEDDDVPDLVEN(0.33)FDEAS(1.0)KN(0.33)EAN(0.33) K:TMT10,n:Deamidated,s:Phosphorylated S BTF3L4 17270.2 1 1 5678.1 17.25 HUMAN 1 -1.9649 13.855 VEPEAPPSPDVLQAA-p Q9P1Y6;S973-p VEPEAPPSPDVLQAA 0.796323249979386 0.779665559191136 0.0456666666666667 -0.0303333333333333 1.90715622561811 1.49614485564488 0.0456666666666667 -0.0303333333333333 0.644591207773264 0.708574492555496 0.488141518846377 -0.394042327486116 Q9P1Y6 PHRF1 Q9P1Y6.S973.p_PHRF1 Q9P1Y6_S973s _1_1_973_973 Q9P1Y6 Q9P1Y6|Q9P1Y6-3|A0A0J9YWD5|A0A0J9YYB5|F8WEF5|B7ZM65|E9PJ24|Q9P1Y6-2|A0A0J9YX88 PHD and RING finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22335.22373.5 25.89 25.89 8.453 5 1 1 0 597.5016 2903.5134 S973s TMT10 959 (R) TVTCVTVVEPEAPPsPDVLQAATHR (V) T(0.0)VT(0.0)CVT(0.0)VVEPEAPPS(0.99)PDVLQAAT(0.0)HR C:Carbamidomethylation,s:Phosphorylated S PHRF1 180374.6 6 12 438.1 312.23 HUMAN 1 1.9072 -1.4961 VEPEIQLS_______-p Q6UX07;S377-p VEPEIQLS_______ 0.631946680933899 0.259071087958793 -0.102 -0.197 3.71157803098793 7.72719163257474 -0.102 -0.197 0.425443797887382 0.168764398843855 -0.861579718026135 -1.58731175919892 Q6UX07 DHRS13 Q6UX07.S377.p_DHRS13 Q6UX07_S377s _1_1_377_377 Q6UX07 Q6UX07|Q6UX07-2|Q6UX07-3 Dehydrogenase/reductase SDR family member 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21317.21317.2 10.02 10.02 99 1 1 1 0 612.3105 1143.6459 S377s TMT10 370 (K) VEPEIQLs (-) VEPEIQLS(1.0) s:Phosphorylated S DHRS13 41361.6 2 2 3886.1 41.38 HUMAN 1 -3.7116 -7.7272 VEPKKLNSPEETAFQ-p Q9BTX1;S406-p VEPKKLNSPEETAFQ 0.534705148071304 0.208448492321714 0.088 0.15 5.03268633953738 8.95977772176379 0.088 0.15 0.313856672492188 0.127063913670453 1.11004470189928 1.80075545253825 Q9BTX1 NDC1 Q9BTX1.S406.p_NDC1 Q9BTX1_S406s _1_1_406_406 Q9BTX1 Q9BTX1|Q9BTX1-2|Q9BTX1-5|Q9BTX1-6|Q9BTX1-4 Nucleoporin NDC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15742.15742.4 11.58 9.98 2.401 3 1 1 0 590.0743 2277.3058 S406s TMT10 403 (K) KLNsPEETAFQTPK (S) KLNS(0.99)PEET(0.0)AFQT(0.0)PK K:TMT10,s:Phosphorylated S NDC1 76988 6 3 1059.1 182.55 HUMAN 1 5.0327 8.9598 VEPLQKGSPKNVESF-p Q9Y2Q9;S73-p VEPLQKGSPKNVESF 0.822254013081849 0.84730728917872 0.033 0.0193333333333334 1.63604559739216 1.01014378334945 0.033 0.0193333333333334 0.686112671618273 0.79247509330403 0.4266031205066 0.276393696012546 Q9Y2Q9 MRPS28 Q9Y2Q9.S73.p_MRPS28 Q9Y2Q9_S73s _1_1_73_73 Q9Y2Q9 Q9Y2Q9 28S ribosomal protein S28, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12806.12806.3 8.15 3.11 99 1 1 1 0 617.3635 1770.1092 S73s TMT10 66 (K) VEPLQKGsPK (N) VEPLQKGS(1.0)PK K:TMT10,s:Phosphorylated S MRPS28 21013.6 1 9 1260.2 161.11 HUMAN 1 1.636 1.0101 VEPPLRHSAPPSPAA-p Q6ZSY5;S14-p VEPPLRHSAPPSPAA 0.260789944862731 0.415215463568943 0.411 -0.120666666666667 11.0560111556752 5.07769118748017 0.411 -0.120666666666667 0.0784149526289155 0.310621048446266 2.16592493443655 -1.11804759045086 Q6ZSY5 PPP1R3F Q6ZSY5.S14.p_PPP1R3F Q6ZSY5_S14sS18s_2_2_14_18 Q6ZSY5 Q6ZSY5 Protein phosphatase 1 regulatory subunit 3F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11466.11466.4 7.84 7.84 7.835 3 2 2 0 656.5704 2463.3306 S14s S18s TMT10 4 (R) TAPVEPPLRHsAPPsPAAGEPR (T) T(0.0)APVEPPLRHS(0.99)APPS(0.99)PAAGEPR s:Phosphorylated S PPP1R3F 83423.7 2 2 4285.1 34.24 HUMAN 1 11.056 -5.0777 VEQATKPSFERGRHG-p Q96E39;S88-p VEQATKPSFERGRHG 0.127500401154934 0.0237945756898068 -0.664333333333333 0.637666666666667 18.5581829134372 22.1369110750208 -0.664333333333333 0.637666666666667 0.0139373982121343 0.0061137671275903 -3.5761248973134 4.34867225662333 Q96E39 RBMXL1 Q96E39.S88.p_RBMXL1 Q96E39_S88s _1_1_88_88 Q96E39 Q96E39 RNA binding motif protein, X-linked-like-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10563.10563.3 12.83 10.47 2.529 2 1 1 0 610.6571 1749.99 S88s TMT10 81 (K) VEQATKPsFER (G) VEQAT(0.0)KPS(0.99)FER K:TMT10,s:Phosphorylated S RBMXL1 42197.9 6 36 102.2 595.29 HUMAN 1 -18.5582 22.1369 VEQATKPSFESGRRG-p P38159;S88-p VEQATKPSFESGRRG 0.189867960204676 0.1200141052036 -0.255666666666667 0.167333333333333 14.1157128989452 12.1400593352969 -0.255666666666667 0.167333333333333 0.0387640111756759 0.061093367799344 -2.71418840040407 2.35601036038874 P38159 RBMX P38159.S88.p_RBMX P38159_S88s _1_1_88_88 P38159 P38159|P38159-2|H3BT71 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13252.13252.5 15.87 15.87 3.42 3 1 1 0 503.8836 2435.4225 S88s TMT10 78 (K) AIKVEQATKPsFESGR (R) AIKVEQAT(0.0)KPS(0.99)FES(0.0)GR K:TMT10,s:Phosphorylated S RBMX 42331.1 12 4 102.1 595.29 HUMAN 1 -14.1157 12.1401 VEQEDELSDVSQGGS-p O60271;S265-p VEQEDELSDVSQGGS 0.219634467679689 0.983409361674526 -0.291666666666667 -0.005 12.6735499410249 0.106586754865262 -0.291666666666667 -0.00500000000000009 0.0540312488732657 0.975756211288195 -2.45240539350949 -0.0318172202561909 O60271 SPAG9 O60271.S265.p_SPAG9 O60271_S265sS268s_2_2_265_268 O60271 O60271|O60271-3 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13975.13975.3 12.31 12.31 6.084 3 2 2 0 799.3616 2236.1345 S265s S268s TMT10 257 (K) AVEQEDELsDVsQGGSK (A) AVEQEDELS(0.99)DVS(0.99)QGGS(0.0)K K:TMT10,s:Phosphorylated S SPAG9 147001.6 1 43 84.1 629.25 HUMAN 1 -12.6735 -0.1066 VEQIEAGTPGRLRVV-p Q16881-4;T315-p VEQIEAGTPGRLRVV 0.514575711384841 0.0816277284164429 0.0963333333333333 0.206666666666667 5.3274688487392 14.4247199331326 0.0963333333333333 0.206666666666667 0.293260192373784 0.0361017294039374 1.16374424943721 2.76951418480946 Q16881 TXNRD1 Q16881.4.T315.p_TXNRD1 Q16881-4_T315t _1_1_315_315 Q16881-4 Q16881-6|Q16881-3|A0A182DWI3|Q16881-4|A0A087WSW9|Q16881-2|Q16881-5|F8W809|E9PIR7|Q16881-7|E2QRB9 Isoform 4 of Thioredoxin reductase 1, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21273.21273.4 16.83 16.83 99 1 1 1 0 669.8846 2596.5339 T315t TMT10 302 (R) QFVPIKVEQIEAGtPGRLR (V) QFVPIKVEQIEAGT(1.0)PGRLR K:TMT10,t:Phosphorylated T TXNRD1 61203.2 1 4 3544.1 48.58 HUMAN 1 5.3275 14.4247 VEQLLTGSPTSPTVE-p Q9C0C9;S836-p VEQLLTGSPTSPTVE 0.787169375720891 0.00819640833915464 -0.0403333333333333 -0.465666666666667 2.00719857630304 29.6932585669176 -0.0403333333333333 -0.465666666666667 0.629912377849886 0.001073183886616 -0.510395627001007 -6.329439231506 Q9C0C9 UBE2O Q9C0C9.S836.p_UBE2O Q9C0C9_S836s _1_1_836_836 Q9C0C9 Q9C0C9 (E3-independent) E2 ubiquitin-conjugating enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23675.23675.4 23.71 23.71 1.103 7 1 1 0 788.4099 3070.6495 S836s TMT10 826 (K) NMTVEQLLTGsPTSPTVEPEKPTR (E) NMT(0.0)VEQLLT(0.0)GS(0.99)PT(0.0)S(0.0)PT(0.0)VEPEKPT(0.0)R K:TMT10,s:Phosphorylated S UBE2O 142717.3 8 10 308.1 373.27 HUMAN 1 -2.0072 -29.6933 VEQMPQASPGLAPRT-p Q8N3F8;S578-p VEQMPQASPGLAPRT 0.190190058935746 0.81164961624226 0.238666666666667 -0.0496666666666666 14.1043216818193 1.2709276009459 0.238666666666667 -0.0496666666666667 0.0388658197167713 0.746289342929648 2.71209229685423 -0.340487078893357 Q8N3F8 MICALL1 Q8N3F8.S578.p_MICALL1 Q8N3F8_S578s _1_1_578_578 Q8N3F8 Q8N3F8 MICAL-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14991.14991.2 17.48 17.48 99 1 1 1 0 895.448 1709.9206 S578s TMT10 571 (R) VEQMPQAsPGLAPR (T) VEQMPQAS(1.0)PGLAPR s:Phosphorylated S MICALL1 94409.4 8 7 755.1 231.25 HUMAN 1 14.1043 -1.2709 VEQSADISQNDVEET-p Q96JM2-3;S1559-p VEQSADISQNDVEET 0.573825603803224 0.183397422422996 0.0823333333333333 0.205666666666667 4.439565997478 9.68941837916697 0.0823333333333333 0.205666666666667 0.359785287701047 0.107413325401376 1.00027444982587 1.92704653470419 Q96JM2 ZNF462 Q96JM2.3.S1559.p_ZNF462 Q96JM2-3_S1559s _1_1_1559_1559 Q96JM2-3 Q96JM2-3 Isoform 3 of Zinc finger protein 462 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26648.26648.4 16.8 16.8 2.121 5 1 1 0 808.1162 3149.4708 S1559s TMT10 1543 (K) VTAEDFVHDVEQSADIsQNDVEETSR (I) VT(0.0)AEDFVHDVEQS(0.0)ADIS(0.99)QNDVEET(0.0)S(0.0)R s:Phosphorylated S ZNF462 296246.7 2 8 736.1 235.26 HUMAN 1 4.4396 9.6894 VEQSGEGSPEEGAVR-p Q9ULL5-3;S1925-p VEQSGEGSPEEGAVR 0.29071623032873 0.861839640259032 0.466333333333333 -0.100666666666667 10.1152475638343 0.910086695117181 0.466333333333333 -0.100666666666667 0.0973812272863797 0.810944869376866 2.00174020765827 -0.251145574758102 Q9ULL5 PRR12 Q9ULL5.3.S1925.p_PRR12 Q9ULL5-3_S1925s _1_1_1925_1925 Q9ULL5-3 Q9ULL5-3 Isoform 3 of Proline-rich protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.33269.33269.4 31.65 31.65 2.191 5 1 1 0 950.7227 3719.9078 S1925s TMT10 1900 (R) LSLSPALQDALHTFPQLQVEQSGEGsPEEGAVR (L) LS(0.0)LS(0.0)PALQDALHT(0.0)FPQLQVEQS(0.0)GEGS(0.99)PEEGAVR s:Phosphorylated S PRR12 212010 1 21 182.1 477.91 HUMAN 1 10.1152 -0.9101 VERARALSLDGEQLI-p O15068-9;S382-p VERARALSLDGEQLI 0.328538980207761 0.916586036978812 -0.179333333333333 0.0226666666666667 9.04112942671567 0.532242580330366 -0.179333333333333 0.0226666666666667 0.124705916172403 0.884658677831479 -1.81548293635716 0.152032119736959 O15068 MCF2L O15068.9.S382.p_MCF2L O15068-9_S382s _1_1_382_382 O15068-9 O15068-9|O15068-10|O15068-8|O15068-6|O15068-2|O15068-3 Isoform 7 of Guanine nucleotide exchange factor DBS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25449.25449.3 17.2 13.88 99 1 1 1 0 632.6807 1816.058 S382s TMT10 380 (R) ALsLDGEQLIGNK (H) ALS(1.0)LDGEQLIGNK K:TMT10,s:Phosphorylated S MCF2L 127771.1 1 2 2436.1 83.49 HUMAN 1 -9.0411 0.5322 VERFSRLSESVLSPP-p Q93009;S82-p VERFSRLSESVLSPP 0.898206909233729 0.777290843147008 0.031 -0.0276666666666666 0.914143462738815 1.51456656859257 0.031 -0.0276666666666666 0.81018771519056 0.705575257843544 0.252201360359147 -0.398355385390556 Q93009 USP7 Q93009.S82.p_USP7 Q93009_S82s _1_1_82_82 Q93009 Q93009|Q93009-3|F5H2X1 Ubiquitin carboxyl-terminal hydrolase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25389.25389.3 9.89 9.89 1.232 4 1 1 0 730.7045 2110.1317 S82s TMT10 78 (R) FSRLsESVLSPPCFVR (N) FS(0.0)RLS(0.99)ES(0.0)VLS(0.0)PPCFVR C:Carbamidomethylation,s:Phosphorylated S USP7 129383.8 1 2 1927.1 106.49 HUMAN 1 0.9141 -1.5146 VERKQKGSEENLDEA-p P35611-3;S617-p VERKQKGSEENLDEA 0.225331748759477 0.0178086620126294 0.326333333333333 0.404666666666667 12.4331317676324 24.0936642880376 0.326333333333333 0.404666666666667 0.0571066682750743 0.00389613118317003 2.40940420957948 4.81210765017673 P35611 ADD1 P35611.3.S617.p_ADD1 P35611-3_S617s_1_1_617_617 P35611-3 P35611-3|E7ENY0|P35611-4|P35611-6|E7EV99|P35611-2 Isoform 3 of Alpha-adducin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8481.8481.3 15.34 15.34 99 1 1 1 0 761.3741 2219.1668 Q614q S617s Hydrogen 614 (K) qKGsEENLDEAREQK (E) Q(1.0)KGS(1.0)EENLDEAREQK K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S ADD1 84872.1 18 11 264.1 396.09 HUMAN 1 12.4331 24.0937 VERMAKLSGDRIVKN-p Q86WS4;S536-p VERMAKLSGDRIVKN 0.193521052466932 0.0547558804123095 -0.608333333333333 0.259666666666667 13.9258006242633 16.8138960470816 -0.608333333333333 0.259666666666667 0.0404967282313665 0.0208262172904182 -2.67930544442201 3.2236465104905 Q86WS4 C12orf40 Q86WS4.S536.p_C12orf40 Q86WS4_S536s _1_1_536_536 Q86WS4 Q86WS4 Uncharacterized protein C12orf40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17976.17976.2 7.25 0.75 99 1 1 1 0 713.409 1345.8568 S536s TMT10 535 (K) LsGDRIVK (N) LS(1.0)GDRIVK K:TMT10,s:Phosphorylated S C12orf40 75701.4 1 3 5788.1 16.28 HUMAN 1 -13.9258 16.8139 VERTRKRSEGFSMDR-p Q7Z4V5-4;S454-p VERTRKRSEGFSMDR 0.00861592953244037 0.000952253650599092 -1.814 -1.48966666666667 54.9579508869906 55.6685503929167 -1.814 -1.48966666666667 3.19304406001058e-06 2.71109640247738e-06 -19.5010330143066 -20.0355750740661 Q7Z4V5 HDGFRP2 Q7Z4V5.4.S454.p_HDGFRP2 Q7Z4V5-4_S454s _1_1_454_454 Q7Z4V5-4 Q7Z4V5-3|Q7Z4V5-4|Q7Z4V5-2 Isoform 4 of Hepatoma-derived growth factor-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4942.4942.3 11.63 4.2 4.349 2 1 1 0 507.9078 1441.7419 S454s Hydrogen 452 (R) KRsEGFSMDR (K) KRS(0.99)EGFS(0.0)MDR K:TMT10-Lys-Only,s:Phosphorylated S HDGFL2 74899.1 5 9 712.1 238.42 HUMAN 1 -54.958 -55.6686 VERWLAESPVGLPPE-p E9PGC8;S2014-p VERWLAESPVGLPPE 0.283177951218012 0.127345761457108 -0.152333333333333 -0.187666666666667 10.3534314345705 11.7981510063824 -0.152333333333333 -0.187666666666667 0.0921842775676065 0.0660974795827146 -2.04318608064436 -2.29545983144688 E9PGC8 NotFound E9PGC8.S2014.p_NotFound E9PGC8_S2014s _1_1_2014_2014 E9PGC8 E9PGC8|P78559-2 Microtubule-associated protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24761.24761.4 18.49 15.25 18.217 2 1 1 0 676.8559 2624.4336 S2014s TMT10 2010 (R) WLAEsPVGLPPEEEDKLTR (S) WLAES(0.99)PVGLPPEEEDKLT(0.0)R K:TMT10,s:Phosphorylated S MAP1A 332906.7 7 30 20.1 1016.98 HUMAN 1 -10.3534 -11.7982 VESALNKSEPFLTWL-p Q9GZV5;S393-p VESALNKSEPFLTWL 0.0395731079578075 0.0221684587881825 -1.20566666666667 0.449333333333333 31.5383777507952 22.5946256180957 -1.20566666666667 0.449333333333333 0.000701717366648838 0.00550221350088311 -6.9141807541086 4.45437044639842 Q9GZV5 WWTR1 Q9GZV5.S393.p_WWTR1 Q9GZV5_S393s _1_1_393_393 Q9GZV5 Q9GZV5 WW domain-containing transcription regulator protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.37626.37626.2 10.32 10.32 10.324 2 1 1 0 651.3229 1221.6717 S393s TMT10 393 (K) sEPFLTWL (-) S(0.99)EPFLT(0.0)WL s:Phosphorylated S WWTR1 44271.7 1 6 1727.1 119.24 HUMAN 1 -31.5384 22.5946 VESARPNSTSSREAE-p Q8WXX7;S956-p VESARPNSTSSREAE 0.787617815962006 0.0354392005537074 -0.0833333333333333 0.444666666666667 2.00246744386303 19.5227065761929 -0.0833333333333333 0.444666666666667 0.630598967914654 0.0111616742182554 -0.509348404103739 3.77383427248136 Q8WXX7 AUTS2 Q8WXX7.S956.p_AUTS2 Q8WXX7_S956s _1_1_956_956 Q8WXX7 Q8WXX7|Q8WXX7-2|A0A087WVB5|Q8WXX7-5 Autism susceptibility gene 2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.5894.5894.3 14.24 9.85 1.144 6 1 1 0 632.9852 1816.9715 S956s TMT10 946 (R) TPVVESARPNsTSSR (E) T(0.0)PVVES(0.0)ARPNS(0.99)T(0.0)S(0.0)S(0.0)R s:Phosphorylated S AUTS2 139379 1 7 684.1 243.98 HUMAN 1 -2.0025 19.5227 VESQKRDSFHRSSFR-p Q8NF50;S2082-p VESQKRDSFHRSSFR 0.16127524660131 0.00887346486157032 -0.286 -0.549333333333333 15.8695071237748 29.0720891012638 -0.286 -0.549333333333333 0.0258850666537434 0.00123820082736882 -3.04317418704238 -6.14535150220375 Q8NF50 DOCK8 Q8NF50.S2082.p_DOCK8 Q8NF50_S2082s _1_1_2082_2082 Q8NF50 Q8NF50|Q8NF50-2|Q8NF50-3|Q8NF50-4|A2A369 Dedicator of cytokinesis protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4185.4185.4 7.38 7.38 7.383 2 1 1 0 482.5043 1847.0288 S2082s TMT10 2075 (R) VESQKRDsFHR (S) VES(0.0)QKRDS(0.99)FHR K:TMT10,s:Phosphorylated S DOCK8 241035.1 1 3 3624.1 46.67 HUMAN 1 -15.8695 -29.0721 VETEPKLSPSWNPKI-p Q96BY7;S255-p VETEPKLSPSWNPKI 0.0200803410167721 0.00259997565261951 -0.881666666666667 -0.702666666666667 39.600060795569 39.3921258183137 -0.881666666666667 -0.702666666666667 0.00010964628469845 0.000115023722408688 -9.97567063239873 -9.86127865994969 Q96BY7 ATG2B Q96BY7.S255.p_ATG2B Q96BY7_S255s _1_1_255_255 Q96BY7 Q96BY7 Autophagy-related protein 2 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20107.20107.4 18.32 18.32 1.301 7 1 1 0 817.1745 3185.712 S255s TMT10 239 (K) SSPVCSTAPVETEPKLsPSWNPK (I) S(0.0)S(0.0)PVCS(0.0)T(0.0)APVET(0.0)EPKLS(0.99)PS(0.0)WNPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATG2B 234641.2 5 2 1188.1 168.47 HUMAN 1 -39.6001 -39.3921 VETIRACSMPQELPQ-p Q8N5J2-3;S143-p VETIRACSMPQELPQ 0.833124060837715 0.0869618051016508 0.034 0.231666666666667 1.52814301545438 14.0421978047911 0.034 0.231666666666667 0.703373008392197 0.0394257732230798 0.401570655000562 2.69904435522337 Q8N5J2 FAM63A Q8N5J2.3.S143.p_FAM63A Q8N5J2-3_S143s _1_1_143_143 Q8N5J2-3 Q8N5J2-3 Isoform 3 of Ubiquitin carboxyl-terminal hydrolase MINDY-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12992.12992.2 9.34 9.34 9.338 2 1 1 0 905.4117 1729.8563 S143s TMT10 141 (R) ACsMPQELPQSPR (T) ACS(0.99)MPQELPQS(0.0)PR C:Carbamidomethylation,s:Phosphorylated S MINDY1 57731.8 2 1 4449.1 31.23 HUMAN 1 1.5281 14.0422 VETTHQDSPLPHPES-p P15336;S136-p VETTHQDSPLPHPES 0.12069597861379 0.00194036235975101 0.298666666666667 0.786333333333333 19.0851523639406 42.4860490395312 0.298666666666667 0.786333333333334 0.0123448200496294 5.64150654137953e-05 3.68530667078585 11.3081074403523 P15336 ATF2 P15336.S136.p_ATF2 P15336_S136s _1_1_136_136 P15336 P15336|P15336-5|P15336-4|E9PBF9|B8ZZU6|E9PEK8 Cyclic AMP-dependent transcription factor ATF-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13491.13491.4 22.5 22.5 2.561 9 1 1 0 993.7531 3892.0067 S136s TMT10 121 (R) SKIEEPSVVETTHQDsPLPHPESTTSDEK (E) S(0.0)KIEEPS(0.0)VVET(0.0)T(0.0)HQDS(0.99)PLPHPES(0.0)T(0.0)T(0.0)S(0.0)DEK K:TMT10,s:Phosphorylated S ATF2 54821.7 1 4 1174.1 169.92 HUMAN 1 19.0852 42.486 VETTMVPSPEAKLTE-p Q16236;S215-p VETTMVPSPEAKLTE 0.579287608093284 0.265304260450172 -0.165333333333333 0.120333333333333 4.35968064895191 7.5882943411234 -0.165333333333333 0.120333333333333 0.366464521001292 0.174249108927738 -0.985288250410428 1.56317890354382 Q16236 NFE2L2 Q16236.S215.p_NFE2L2 Q16236_S215s _1_1_215_215 Q16236 Q16236|Q16236-2|Q16236-3 Nuclear factor erythroid 2-related factor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21244.21244.3 8.52 8.52 8.517 3 1 1 0 647.3442 1860.0553 S215s TMT10 207 (K) LVETTMVPsPEAK (L) LVET(0.0)T(0.0)MVPS(0.99)PEAK K:TMT10,s:Phosphorylated S NFE2L2 68167.6 1 1 4552.1 29.93 HUMAN 1 -4.3597 7.5883 VEVFKSNSVEMDWVL-p P55795;S90-p VEVFKSNSVEMDWVL 0.299327491242072 0.0189310699092198 -0.216 0.372 9.85144961131555 23.7004228671684 -0.216 0.372 0.103479670905624 0.00426537985303242 -1.95591336959661 4.71649442951638 P55795 HNRNPH2 P55795.S90.p_HNRNPH2 P55795_S90s _1_1_90_90 P55795 P55795 Heterogeneous nuclear ribonucleoprotein H2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.27068.27068.3 14.91 10.9 2.076 2 1 1 0 615.9781 1765.9559 S90s TMT10 88 (K) SNsVEMDWVLK (H) S(0.0)NS(0.99)VEMDWVLK K:TMT10,s:Phosphorylated S HNRNPH2 49548 2 19 990.3 191.56 HUMAN 1 -9.8514 23.7004 VEVIHVPSPALEERK-p Q86TI2;S292-p VEVIHVPSPALEERK 0.662560645933152 0.0198882065982857 0.0606666666666667 0.380666666666667 3.34642933186022 23.3369268249397 0.0606666666666667 0.380666666666667 0.462761336633986 0.0046377498228653 0.789938967859367 4.62924817888198 Q86TI2 DPP9 Q86TI2.S292.p_DPP9 Q86TI2_S292s _1_1_292_292 Q86TI2 Q86TI2-2 Dipeptidyl peptidase 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.29410.29410.3 19.84 19.84 2.28 3 1 1 0 1030.8397 3010.5458 S292s TMT10 275 (R) ILYEEVDESEVEVIHVPsPALEER (K) ILY(0.0)EEVDES(0.0)EVEVIHVPS(0.99)PALEER s:Phosphorylated S DPP9 99060.3 1 2 4046.1 38.65 HUMAN 1 3.3464 23.3369 VEVPAVQSPRRSPRI-p B5MBX0;S75-p VEVPAVQSPRRSPRI 0.403418556192598 0.0166208720519008 0.129 -0.424666666666667 7.27876043455596 24.5696254488478 0.129 -0.424666666666667 0.187121614758609 0.00349170427891278 1.50972592247854 -4.92958036169466 B5MBX0 NotFound B5MBX0.S75.p_NotFound B5MBX0_S75s _1_1_75_75 B5MBX0 B5MBX0|Q96FF9 Sororin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16066.16066.3 22.31 22.31 99 1 1 1 0 628.0104 1802.0486 S75s TMT10 63 (R) IVAHAVEVPAVQsPR (R) IVAHAVEVPAVQS(1.0)PR s:Phosphorylated S CDCA5 34133.5 13 3 682.1 245.26 HUMAN 1 7.2788 -24.5696 VEYEERESEFDIEDE-p Q15291;S350-p VEYEERESEFDIEDE 0.133469229088605 0.587347925786436 -0.768 0.495333333333333 18.0010699165461 3.12439861025839 -0.768 0.495333333333333 0.0158450279040359 0.487034962714345 -3.46248182402868 0.745460614634392 Q15291 RBBP5 Q15291.S350.p_RBBP5 Q15291_S350s _1_1_350_350 Q15291 Q15291|Q15291-2 Retinoblastoma-binding protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19928.19928.3 19.68 15.39 8.603 2 1 1 0 1100.4937 3219.4741 S350s TMT10 338 (K) ELDENVEYEEREsEFDIEDEDK (S) ELDENVEY(0.0)EERES(0.99)EFDIEDEDK K:TMT10,s:Phosphorylated S RBBP5 59836.2 3 3 1667.1 122.41 HUMAN 1 -18.0011 3.1244 VEYEPRGSRLLVRGL-p Q9UIQ6;S51-p VEYEPRGSRLLVRGL 0.911753399332893 0.00676457338427371 -0.0283333333333333 -0.636333333333333 0.781955511244992 31.1512487564387 -0.0283333333333333 -0.636333333333334 0.835226853361176 0.000767140876416435 -0.218252937707302 -6.77889436499927 Q9UIQ6 LNPEP Q9UIQ6.S51.p_LNPEP Q9UIQ6_S51s _1_1_51_51 Q9UIQ6 Q9UIQ6 Leucyl-cystinyl aminopeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28125.28125.5 18.73 11.85 3.229 3 1 1 0 1028.4806 5058.4211 S51s TMT10 14 (R) NMIENSMFEEEPDVVDLAKEPCLHPLEPDEVEYEPRGsR (L) NMIENS(0.0)MFEEEPDVVDLAKEPCLHPLEPDEVEY(0.0)EPRGS(0.99)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S LNPEP 117860.4 1 1 3800.1 42.87 HUMAN 1 -0.782 -31.1512 VFAEVGCSPCGAPDQ-p J3KPF0;S1025-p VFAEVGCSPCGAPDQ 0.176433174076321 0.317295418639699 -0.266666666666667 -0.152666666666667 14.9549450870408 6.58934394566325 -0.266666666666667 -0.152666666666667 0.0319525476591685 0.219313621007573 -2.87000534919107 -1.3885593489933 J3KPF0 NotFound J3KPF0.S1025.p_NotFound J3KPF0_S1025s _1_1_1025_1025 J3KPF0 J3KPF0|F8VWT9|Q9Y4D8|Q9Y4D8-4|Q9Y4D8-2|Q9Y4D8-5|Q9Y4D8-3 Probable E3 ubiquitin-protein ligase HECTD4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18774.18774.3 21.36 21.36 13.06 2 1 1 0 916.0869 2666.2777 S1025s TMT10 1014 (K) TQCPVFAEVGCsPCGAPDQK (C) T(0.0)QCPVFAEVGCS(0.99)PCGAPDQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S HECTD4 490564.1 1 2 927.1 199.75 HUMAN 1 -14.9549 -6.5893 VFAMFDQSQIQEFKE-p J3QRS3;S34-p VFAMFDQSQIQEFKE 0.255498822846135 0.0533130489290514 -0.265666666666667 0.316666666666667 11.2695574087702 16.980220910139 -0.265666666666667 0.316666666666667 0.0746524833175574 0.020043700696036 -2.20340254244728 3.25626252655433 J3QRS3 MYL12A J3QRS3.S34.p_MYL12A J3QRS3_S34s _1_1_34_34 J3QRS3 J3QRS3|O14950|P24844|P19105|P24844-2 Myosin regulatory light chain 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.33783.33783.3 19.72 19.72 19.717 3 1 1 0 877.0972 2549.311 S34s TMT10 23 (R) ATSNVFAMFDQsQIQEFK (E) AT(0.0)S(0.0)NVFAMFDQS(0.99)QIQEFK K:TMT10,s:Phosphorylated S MYL12A 20513.6 2 2 2636.1 75.75 HUMAN 1 -11.2696 16.9802 VFDFPDNSDVSSIGR-p Q71F23;S50-p VFDFPDNSDVSSIGR 0.506609842161293 0.157289434547862 0.0906666666666667 -0.179333333333333 5.44470791726647 10.5651022167114 0.0906666666666667 -0.179333333333333 0.285449448502976 0.0877990422235829 1.18496499416675 -2.07918733281747 Q71F23 CENPU Q71F23.S50.p_CENPU Q71F23_S50s _1_1_50_50 Q71F23 Q71F23|Q71F23-3|Q09GN1 Centromere protein U HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26252.26925.3 17.87 12.64 2.148 3 1 1 0 936.1198 2726.386 S50s TMT10 38 (K) CKPIDVFDFPDNsDVSSIGR (L) CKPIDVFDFPDNS(0.99)DVS(0.0)S(0.0)IGR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CENPU 47749 3 2 1181.1 168.95 HUMAN 1 5.4447 -10.5651 VFIDQNLSPGKGVVS-p Q14186;S23-p VFIDQNLSPGKGVVS 0.108727233162321 0.0011418699812441 -0.729666666666667 -1.27066666666667 20.1957813771089 48.8225683183761 -0.729666666666667 -1.27066666666667 0.0095592069151178 1.31142412337927e-05 -3.92109370356913 -14.911939054807 Q14186 TFDP1 Q14186.S23.p_TFDP1 Q14186_S23s _1_1_23_23 Q14186 Q14186|F5H452 Transcription factor Dp-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22778.22778.2 16.65 13.76 99 1 1 1 0 878.4763 1675.9783 S23s TMT10 16 (K) VFIDQNLsPGK (G) VFIDQNLS(1.0)PGK K:TMT10,s:Phosphorylated S TFDP1 45354.9 5 1 3662.1 45.8 HUMAN 1 -20.1958 -48.8226 VFIIKSYSEDDIHRS-p Q7Z739;S425-p VFIIKSYSEDDIHRS 0.807399255272832 0.214427967317373 -0.035 0.161666666666667 1.78603035176113 8.79802582339837 -0.035 0.161666666666667 0.662822076293457 0.131885611600888 -0.460877648940133 1.77277874918127 Q7Z739 YTHDF3 Q7Z739.S425.p_YTHDF3 Q7Z739_S425s _1_1_425_425 Q7Z739 A0A087WY31|Q7Z739|A0A087X0Q1|Q9Y5A9|Q9BYJ9|A0A024R7W5|Q9Y5A9-2 YTH domain-containing family protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5599.5599.3 13.47 13.47 2.941 3 1 1 0 477.5437 1350.6487 S425s TMT10 423 (K) SYsEDDIHR (S) S(0.0)Y(0.0)S(0.99)EDDIHR s:Phosphorylated S YTHDF3 63974.2 3 8 1868.1 109.97 HUMAN 1 -1.786 8.798 VFIPVNRSPEMQEER-p Q8IY37;S242-p VFIPVNRSPEMQEER 0.834117503246035 0.849560880763458 0.0306666666666667 -0.022 1.52061441317769 0.994625695249871 0.0306666666666667 -0.022 0.704593380368714 0.795311808002136 0.399811870912443 -0.272502975244481 Q8IY37 DHX37 Q8IY37.S242.p_DHX37 Q8IY37_S242s _1_1_242_242 Q8IY37 Q8IY37|F5H3Y4 Probable ATP-dependent RNA helicase DHX37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.19841.19841.3 13.55 8.77 99 1 1 1 0 770.0528 2228.1695 S242s TMT10 233 (K) PAVFIPVNRsPEMQEER (L) PAVFIPVNRS(1.0)PEMQEER s:Phosphorylated S DHX37 130627.1 2 1 4785.1 26.64 HUMAN 1 1.5206 -0.9946 VFKDTLRTPPRERSG-p Q9UQ35;T1208-p VFKDTLRTPPRERSG 0.437896049613535 0.666432638687303 -0.106666666666667 -0.0603333333333333 6.60407662083518 2.4117696908982 -0.106666666666667 -0.0603333333333333 0.218570898675895 0.573882565221927 -1.39151492422344 -0.598101669731538 Q9UQ35 SRRM2 Q9UQ35.T1208.p_SRRM2 Q9UQ35_T1208t _1_1_1208_1208 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21308.21308.5 11.69 7.51 1.118 5 1 1 0 748.8004 3660.0062 T1208t TMT10 1187 (K) FSPFPVQDRPESSLVFKDTLRtPPRER (S) FS(0.0)PFPVQDRPES(0.0)S(0.0)LVFKDT(0.0)LRT(0.99)PPRER K:TMT10,t:Phosphorylated T SRRM2 300351.7 8 69 2.1 3310.34 HUMAN 1 -6.6041 -2.4118 VFKKHGVYNPNKIFG-p P40926;Y161-p VFKKHGVYNPNKIFG 0.259805946096148 0.0599226547177387 0.174666666666667 0.392333333333333 11.1029401832749 16.2864145304383 0.174666666666667 0.392333333333333 0.0775721773458364 0.0235157344313429 2.17415346283503 3.12112535370005 P40926 MDH2 P40926.Y161.p_MDH2 P40926_Y161y _1_1_161_161 P40926 P40926|G3XAL0 Malate dehydrogenase, mitochondrial GG20160819_MSz_CCLE_T4D7_pY_Injection_01.6265.6309.3 9.43 9.43 99 1 1 1 0 489.5905 1386.7894 Y161y TMT10 158 (K) HGVyNPNK (I) HGVY(1.0)NPNK K:TMT10,y:Phosphorylated Y MDH2 35959.1 2 1 359.1 9.43 HUMAN 1 11.1029 16.2864 VFLLSVPSLDCLPIT-p P15822;S830-p VFLLSVPSLDCLPIT 0.204518295038898 0.140214957610479 -0.654 -0.294666666666667 13.3404143491373 11.2419411467955 -0.654 -0.294666666666667 0.0463402705573045 0.0751287019532613 -2.74622673344437 -2.19753481863332 P15822 HIVEP1 P15822.S830.p_HIVEP1 P15822_S830s _1_1_830_830 P15822 P15822|F5H212 Zinc finger protein 40 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.36569.36569.3 19.3 19.3 3.04 3 1 1 0 756.4088 2187.2409 S830s TMT10 822 (K) QVFLLSVPsLDCLPITR (S) QVFLLS(0.0)VPS(0.99)LDCLPIT(0.0)R C:Carbamidomethylation,s:Phosphorylated S HIVEP1 299483.8 1 15 82.1 631.69 HUMAN 1 -13.3404 -11.2419 VFNDNDGSDDENDDK-p O60281;S654-p VFNDNDGSDDENDDK 0.417861668686393 0.0150907780024349 -0.246333333333333 0.380333333333333 6.99341672401551 25.1969844841865 -0.246333333333333 0.380333333333333 0.199828913748574 0.00302204934652781 -1.45986079558918 5.08742546141289 O60281 ZNF292 O60281.S654.p_ZNF292 O60281_S654s _1_1_654_654 O60281 O60281|J3KNV1|O60281-2 Zinc finger protein 292 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25582.25582.3 18.9 18.9 6.796 5 1 1 0 1250.5717 3669.7283 S654s TMT10 638 (K) NSLYSTDFIVFNDNDGsDDENDDKDK (S) NS(0.0)LY(0.0)S(0.0)T(0.0)DFIVFNDNDGS(0.99)DDENDDKDK K:TMT10,s:Phosphorylated S ZNF292 309716.9 2 1 1936.1 106.19 HUMAN 1 -6.9934 25.197 VFPEPTESGDEGEEL-p Q9BUR4;S491-p VFPEPTESGDEGEEL 0.486043064859747 0.274976599015699 0.0973333333333333 0.113333333333333 5.7730824861309 7.38842675532204 0.0973333333333333 0.113333333333333 0.264662098317021 0.182455653364947 1.2440326377596 1.52840243353208 Q9BUR4 WRAP53 Q9BUR4.S491.p_WRAP53 Q9BUR4_S491s _1_1_491_491 Q9BUR4 Q9BUR4|E9PMG4 Telomerase Cajal body protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.34301.34501.3 24.96 24.96 2.305 4 1 1 0 927.786 2701.377 S491s TMT10 484 (R) VFPEPTEsGDEGEELGLPLLSTR (H) VFPEPT(0.0)ES(0.99)GDEGEELGLPLLS(0.0)T(0.0)R s:Phosphorylated S WRAP53 60164.1 13 7 1145.1 172.91 HUMAN 1 5.7731 7.3884 VFPKVEHSPGPPLAD-p Q3T8J9-3;S1268-p VFPKVEHSPGPPLAD 0.456329906764675 0.224669884263819 0.163333333333333 -0.169333333333333 6.28299491189105 8.53969035488368 0.163333333333333 -0.169333333333333 0.235342579246063 0.139968711449888 1.33482419672456 -1.72809181059618 Q3T8J9 GON4L Q3T8J9.3.S1268.p_GON4L Q3T8J9-3_S1268s _1_1_1268_1268 Q3T8J9-3 Q3T8J9|Q3T8J9-3|A0A087WUE6|Q3T8J9-2 Isoform 3 of GON-4-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13386.13386.3 19.67 19.67 17.794 3 1 1 0 1007.1082 2939.3461 S1268s TMT10 1265 (K) VEHsPGPPLADAECQEGLSENSACR (W) VEHS(0.99)PGPPLADAECQEGLS(0.0)ENS(0.0)ACR C:Carbamidomethylation,s:Phosphorylated S GON4L 250541.8 3 13 291.1 381.52 HUMAN 1 6.283 -8.5397 VFPKVEHSPGPPPVD-p Q9H869-9;S816-p VFPKVEHSPGPPPVD 0.634503917129935 0.889469027764128 -0.0813333333333334 0.0166666666666667 3.68050667486896 0.713330782278882 -0.0813333333333334 0.0166666666666667 0.428498526186412 0.848529453425074 -0.855543280742877 0.200320319089627 Q9H869 YY1AP1 Q9H869.9.S816.p_YY1AP1 Q9H869-9_S816s _1_1_816_816 Q9H869-9 Q9H869-9|Q9H869-8|Q9H869-2|Q9H869-3|Q9H869-4|Q9H869-6|Q9H869-5|Q9H869-7 Isoform 9 of YY1-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9263.9263.2 17.94 17.94 99 1 1 1 0 898.9697 1716.9685 S816s TMT10 813 (K) VEHsPGPPPVDK (Q) VEHS(1.0)PGPPPVDK K:TMT10,s:Phosphorylated S YY1AP1 98798 5 26 291.2 381.52 HUMAN 1 -3.6805 0.7133 VFQTRAASADYLRPR-p Q9NRA8;S577-p VFQTRAASADYLRPR 0.590927658979368 0.320538359727879 -0.0766666666666667 -0.098 4.20833382631088 6.53467533901107 -0.0766666666666667 -0.098 0.379460537340613 0.222091770406986 -0.956749151863271 -1.37893269178638 Q9NRA8 EIF4ENIF1 Q9NRA8.S577.p_EIF4ENIF1 Q9NRA8_S577s _1_1_577_577 Q9NRA8 Q9NRA8-3|B1AKL4|Q9NRA8-2 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.8578.8578.3 12.14 8.33 6.168 2 1 1 0 476.9116 1348.7535 S577s TMT10 575 (R) AAsADYLRPR (I) AAS(0.99)ADY(0.0)LRPR s:Phosphorylated S EIF4ENIF1 108541.3 3 15 150.1 511.59 HUMAN 1 -4.2083 -6.5347 VFRHGARSPLKPLPL-p Q9NPH0;S63-p VFRHGARSPLKPLPL 0.0866557243462627 0.0057193778340584 -0.340333333333333 -0.658 22.7412222213804 32.4662751411488 -0.340333333333333 -0.658 0.00531958530773048 0.000566725149731286 -4.49351756658037 -7.20635572934671 Q9NPH0 ACP6 Q9NPH0.S63.p_ACP6 Q9NPH0_S63s_1_1_63_63 Q9NPH0 Q9NPH0|Q9NPH0-2|A0A0A0MS36|A0A087WWB7 Lysophosphatidic acid phosphatase type 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7317.7317.4 7.02 0.82 99 1 1 1 0 570.5739 2183.3 M52m S63s TMT10 52 (K) mVQVVFRHGARsPLK (P) M(1.0)VQVVFRHGARS(1.0)PLK K:TMT10,m:Oxidized methionine,s:Phosphorylated S ACP6 49367 1 1 7284.1 7.02 HUMAN 1 -22.7412 -32.4663 VFSAPSLSAGASAAE-p Q14573;S942-p VFSAPSLSAGASAAE 0.401454832845887 0.667445669908006 0.198333333333333 0.0456666666666667 7.31517353782412 2.40307473271122 0.198333333333333 0.0456666666666667 0.185559266114019 0.575032679613614 1.51607767185605 0.596250071628639 Q14573 ITPR3 Q14573.S942.p_ITPR3 Q14573_S942s _1_1_942_942 Q14573 Q14573 Inositol 1,4,5-trisphosphate receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20675.20675.3 11.69 11.69 1.22 5 1 1 0 909.8093 2647.4456 S942s TMT10 932 (R) KQSVFSAPSLsAGASAAEPLDR (S) KQS(0.0)VFS(0.0)APS(0.0)LS(0.99)AGAS(0.0)AAEPLDR K:TMT10,s:Phosphorylated S ITPR3 307010.8 2 3 1377.1 148.68 HUMAN 1 7.3152 2.4031 VFSPPQASPPQPSHG-p O75385;S588-p VFSPPQASPPQPSHG 0.049158581421578 0.00990702550110924 -0.456666666666667 -0.466 28.9923731282276 28.1823708564599 -0.456666666666667 -0.466 0.00126113821877535 0.00151971767435551 -6.13131337539374 -5.88901221433016 O75385 ULK1 O75385.S588.p_ULK1 O75385_S588s _1_1_588_588 O75385 O75385 Serine/threonine-protein kinase ULK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25702.25702.5 28.36 28.36 3.479 5 1 1 0 761.1986 3721.9889 S588s TMT10 570 (K) LPKPPTDPLGAVFSPPQAsPPQPSHGLQSCR (N) LPKPPT(0.0)DPLGAVFS(0.0)PPQAS(0.99)PPQPS(0.0)HGLQS(0.0)CR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ULK1 113656.3 3 12 351.1 351.01 HUMAN 1 -28.9924 -28.1824 VFSVSKQSPPISTSK-p P33981;S436-p VFSVSKQSPPISTSK 0.224767265517543 0.00975016705366846 -0.185666666666667 -0.539666666666667 12.4528811096862 28.3098033965066 -0.185666666666667 -0.539666666666667 0.0568475678945595 0.00147577333947281 -2.41293039346456 -5.92520926049104 P33981 TTK P33981.S436.p_TTK P33981_S436s _1_1_436_436 P33981 P33981|P33981-2 Dual specificity protein kinase TTK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9926.9926.2 10.07 7.09 3.783 4 1 1 0 741.9022 1402.8306 S436s TMT10 435 (K) QsPPISTSK (W) QS(0.99)PPIS(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S TTK 98040.5 2 8 1204.1 166.9 HUMAN 1 -12.4529 -28.3098 VFSYQVASTLKQVKH-p Q96DE5;S65-p VFSYQVASTLKQVKH 0.503727443653237 0.636575037709582 0.105 0.0453333333333333 5.49725635768982 2.67000533312702 0.105 0.0453333333333333 0.282016399872618 0.540753658900827 1.19445299619327 0.652464961713037 Q96DE5 ANAPC16 Q96DE5.S65.p_ANAPC16 Q96DE5_S65s _1_1_65_65 Q96DE5 Q96DE5 Anaphase-promoting complex subunit 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.32416.32416.3 10.97 10.97 1.186 5 1 1 0 806.4153 2337.2565 S65s TMT10 53 (R) FLCESVFSYQVAsTLK (Q) FLCES(0.0)VFS(0.0)Y(0.0)QVAS(0.99)T(0.0)LK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANAPC16 11723.9 1 1 4777.1 26.79 HUMAN 1 5.4973 2.67 VFTEKEGTYDGSWAL-p B7Z6D5;T63-p VFTEKEGTYDGSWAL 0.584245183878784 0.105430132149135 0.116 0.4 4.2950639967835 12.9088620341049 0.116 0.4 0.37195774002523 0.0511815927221135 0.973127658501325 2.49330072357182 B7Z6D5 NotFound B7Z6D5.T63.p_NotFound B7Z6D5_T63t _1_1_63_63 B7Z6D5 Q96GQ7|B7Z6D5|A0A087WYH5 Probable ATP-dependent RNA helicase DDX27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.36979.36979.3 20.94 16.38 2.264 4 1 1 0 837.0751 2429.2423 T63t TMT10 61 (K) EGtYDGSWALADVMSQLK (K) EGT(0.99)Y(0.0)DGS(0.0)WALADVMS(0.0)QLK K:TMT10,t:Phosphorylated T DDX27 87002.4 1 3 2685.1 73.99 HUMAN 1 4.2951 12.9089 VGAAGGSSTPSPRPS-p A4D1S0;S140-p VGAAGGSSTPSPRPS 0.0722495595033206 0.115578722929137 0.418666666666667 0.169 24.5265669961194 12.3618651864376 0.418666666666667 0.169 0.00352649522708868 0.0580515047247809 4.92486147041477 2.39545089596835 A4D1S0 KLRG2 A4D1S0.S140.p_KLRG2 A4D1S0_S139sS140sT141t_3_3_139_141 A4D1S0 A4D1S0|A4D1S0-2 Killer cell lectin-like receptor subfamily G member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.10280.10492.3 7.46 7.46 7.457 6 3 3 0 869.7542 2367.3509 S139s S140s T141t TMT10 130 (R) VKPVGAAGGsstPSPRPSTR (F) VKPVGAAGGS(0.99)S(0.99)T(0.99)PS(0.0)PRPS(0.0)T(0.0)R K:TMT10,s:Phosphorylated S,t:Phosphorylated T KLRG2 43534.4 4 18 945.1 197.69 HUMAN 1 24.5266 12.3619 VGAAYQDSPGEQKGI-p Q96SN8;S1020-p VGAAYQDSPGEQKGI 0.588596679394358 0.0109829915109386 0.0813333333333333 -0.390333333333333 4.23902836423118 27.4507031279764 0.0813333333333333 -0.390333333333333 0.376788087375283 0.00179857969934427 0.962553136301432 -5.68444398742145 Q96SN8 CDK5RAP2 Q96SN8.S1020.p_CDK5RAP2 Q96SN8_S1020s _1_1_1020_1020 Q96SN8 Q96SN8|Q96SN8-2|Q96SN8-4|A0A0A0MRG9 CDK5 regulatory subunit-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21022.21053.3 17.58 17.58 2.508 3 1 1 0 908.1349 2642.419 S1020s TMT10 1005 (K) TLLNAQPPVGAAYQDsPGEQK (G) T(0.0)LLNAQPPVGAAY(0.0)QDS(0.99)PGEQK K:TMT10,s:Phosphorylated S CDK5RAP2 216574.2 2 2 932.1 199.16 HUMAN 1 4.239 -27.4507 VGAGEFVSPCESGDN-p Q12888-2;S1706-p VGAGEFVSPCESGDN 0.461363662381176 0.0130423999112199 0.102333333333333 0.396 6.19523936886111 26.2459870748621 0.102333333333333 0.396 0.240146390343132 0.00237356589170439 1.31927026326316 5.35930024626196 Q12888 TP53BP1 Q12888.2.S1706.p_TP53BP1 Q12888-2_S1706s _1_1_1706_1706 Q12888-2 Q12888-2|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17847.17847.3 28.23 28.23 2.37 6 1 1 0 1324.6302 3891.9071 S1706s TMT10 1691 (K) SATVKPGAVGAGEFVsPCESGDNTGEPSALEEQR (G) S(0.0)AT(0.0)VKPGAVGAGEFVS(0.99)PCES(0.0)GDNT(0.0)GEPS(0.0)ALEEQR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TP53BP1 216167.2 10 76 3.1 2297.07 HUMAN 1 6.1952 26.246 VGAQLKVYHQQYQDK-p O00459;Y449-p VGAQLKVYHQQYQDK 0.225645828512172 0.0362689792034566 -0.234 -0.262666666666667 12.408951294043 19.3890356401712 -0.234 -0.262666666666667 0.0574255112841397 0.0115105595491098 -2.40508833923792 -3.74567120806841 O00459 PIK3R2 O00459.Y449.p_PIK3R2 O00459_Y449y _1_1_449_449 O00459 O00459|E9PFP1 Phosphatidylinositol 3-kinase regulatory subunit beta GG20160819_MSz_CCLE_T4D7_pY_Injection_01.7778.7817.3 16.59 13.85 16.587 2 1 1 0 582.9588 1666.8953 Y449y TMT10 448 (K) VyHQQYQDK (S) VY(0.99)HQQY(0.0)QDK K:TMT10,y:Phosphorylated Y PIK3R2 81886.1 2 1 75.1 33.18 HUMAN 1 -12.409 -19.389 VGARPRASPPPQGPL-p Q96G74;S64-p VGARPRASPPPQGPL 0.779499450490418 0.876362063054099 0.0403333333333333 -0.017 2.07872526271652 0.805746742088364 0.0403333333333333 -0.017 0.619622919553864 0.830663878984567 0.526166580721987 -0.224394630596507 Q96G74 OTUD5 Q96G74.S64.p_OTUD5 Q96G74_S64s _1_1_64_64 Q96G74 Q96G74|Q96G74-5|Q96G74-3|Q96G74-2|A0A087WXV6 OTU domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14339.14339.3 20.26 19.81 99 1 1 1 0 685.6964 1975.1075 S64s TMT10 63 (R) AsPPPQGPLPGPPGALHR (W) AS(1.0)PPPQGPLPGPPGALHR s:Phosphorylated S OTUD5 61138.2 15 1 946.1 197.26 HUMAN 1 2.0787 -0.8057 VGAVGGGSPEREEVG-p Q96G74;S165-p VGAVGGGSPEREEVG 0.451823780329444 0.684579985552986 0.133333333333333 0.0393333333333334 6.36763950648673 2.25353153796385 0.133333333333333 0.0393333333333334 0.230800130131669 0.595177967813501 1.34980143967075 0.564175447605806 Q96G74 OTUD5 Q96G74.S165.p_OTUD5 Q96G74_S165sS177s_2_2_165_177 Q96G74 Q96G74|Q96G74-5|Q96G74-3|Q96G74-2|A0A087WXV6 OTU domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16167.16167.4 29.92 29.92 2.152 4 2 2 0 935.6585 3579.6785 S165s S177s TMT10 154 (R) QAPGVGAVGGGsPEREEVGAGYNsEDEYEAAAAR (I) QAPGVGAVGGGS(0.99)PEREEVGAGY(0.0)NS(0.99)EDEY(0.0)EAAAAR s:Phosphorylated S OTUD5 61138.2 7 6 946.1 197.26 HUMAN 1 6.3676 2.2535 VGDRENGSDNLPSSA-p O43399-2;S166-p VGDRENGSDNLPSSA 0.746396283671232 0.0557863954490743 0.046 0.311333333333333 2.41188988135166 16.7001409291792 0.046 0.311333333333333 0.573866683313638 0.0213789271345296 0.598202271263212 3.20142021031763 O43399 TPD52L2 O43399.2.S166.p_TPD52L2 O43399-2_S166s_1_1_166_166 O43399-2 O43399-7|O43399-5|O43399-3|O43399-4|O43399-2|O43399-6|A0A087WZ51 Isoform 2 of Tumor protein D54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21765.21765.4 13.28 9.24 2.429 5 1 1 0 856.9148 3343.6807 N164n S166s TMT10 158 (K) VVGDREnGsDNLPSSAGSGDKPLSDPAPF (-) VVGDREN(0.99)GS(0.99)DN(0.0)LPS(0.0)S(0.0)AGS(0.0)GDKPLS(0.0)DPAPF K:TMT10,n:Deamidated,s:Phosphorylated S TPD52L2 19957.8 4 18 793.1 224.4 HUMAN 1 2.4119 16.7001 VGEARALYNIGNVYH-p A0A0A0MRC4;Y182-p VGEARALYNIGNVYH 0.848136465898174 0.0500384684317076 0.031 0.284666666666667 1.38246187304324 17.3872166570707 0.031 0.284666666666667 0.727367366934145 0.018250649905583 0.367242512238669 3.33667863534961 A0A0A0MRC4 NotFound A0A0A0MRC4.Y182.p_NotFound A0A0A0MRC4_Y182y _1_1_182_182 A0A0A0MRC4 A0A0A0MRC4|Q86YR5|A0A0A0MSK4|Q86YR5-4|Q86YR5-3|A0A087WVF5|P81274 G-protein-signaling modulator 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.20355.20355.3 24.82 24.82 18.234 2 1 1 0 634.3408 1821.0423 Y182y TMT10 180 (R) ALyNIGNVYHAK (G) ALY(0.99)NIGNVY(0.0)HAK K:TMT10,y:Phosphorylated Y GPSM1 78910.1 1 1 127.1 24.82 HUMAN 1 1.3825 17.3872 VGEDAMKTPSPAAED-p Q92797;T1257-p VGEDAMKTPSPAAED 0.87644931294694 0.0767120133958987 0.028 0.211833333333333 1.12362767487653 14.7975864959805 0.028 0.211833333333333 0.772035432164354 0.0331315192069015 0.304607969504726 2.8387520394297 Q92797 SYMPK Q92797.T1257.p_SYMPK Q92797_T1257tS1259s_2_2_1257_1259 Q92797 Q92797 Symplekin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15153.15153.4 12.69 9.97 4.426 4 2 2 0 964.975 3680.9409 M1255m T1257t S1259s TMT10 1243 (R) SPQTLAPVGEDAmKtPsPAAEDAREPEAK (G) S(0.0)PQT(0.0)LAPVGEDAM(1.0)KT(0.99)PS(0.99)PAAEDAREPEAK K:TMT10,m:Oxidized methionine,t:Phosphorylated T,s:Phosphorylated S SYMPK 142001.7 10 13 808.1 221.39 HUMAN 2 1.1236 14.7976 VGEDEDGSDEEVVHN-p P49792;S2900-p VGEDEDGSDEEVVHN 0.343164410890753 0.0442989058157873 -0.272333333333333 0.538333333333333 8.62580916744947 18.1229229597882 -0.26868416626561 0.538333333333334 0.137220527107127 0.0154066318158281 -1.74358891050415 3.48430825470922 P49792 RANBP2 P49792.S2900.p_RANBP2 P49792_S2900s _1_1_2900_2900 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28386.28597.4 25 25 7.608 2 1 1 0 1032.9957 4048.9915 S2900s TMT10 2893 (K) VGEDEDGsDEEVVHNEDIHFEPIVSLPEVEVK (S) VGEDEDGS(0.99)DEEVVHNEDIHFEPIVS(0.0)LPEVEVK K:TMT10,s:Phosphorylated S RANBP2 362585.9 6 68 9.1 1298.62 HUMAN 1 -8.6258 18.1229 VGEEALTSDDLLYLE-p P21281;S446-p VGEEALTSDDLLYLE 0.820904102287946 0.08037670191759 0.0573333333333333 0.194666666666667 1.65173432842829 14.5264130900159 0.0573333333333333 0.194666666666667 0.683638585877958 0.0352662020191082 0.430216100520486 2.78834295516531 P21281 ATP6V1B2 P21281.S446.p_ATP6V1B2 P21281_S446s _1_1_446_446 P21281 P21281 V-type proton ATPase subunit B, brain isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37374.37374.3 13.64 13.64 1.149 3 1 1 0 964.5068 2811.5432 S446s TMT10 437 (K) AVVGEEALTsDDLLYLEFLQK (F) AVVGEEALT(0.0)S(0.99)DDLLY(0.0)LEFLQK K:TMT10,s:Phosphorylated S ATP6V1B2 56842 1 3 4681.1 28.07 HUMAN 1 1.6517 14.5264 VGEEEHVYSFPNKQK-p A0A1B0GTU4;Y118-p VGEEEHVYSFPNKQK 0.223663787104468 0.333944165481148 0.183666666666667 0.112666666666667 12.4988328053205 6.31287489198145 0.183666666666667 0.112666666666667 0.0562492478391428 0.233728951477879 2.42113915593352 1.33977955993388 A0A1B0GTU4 NotFound A0A1B0GTU4.Y118.p_NotFound A0A1B0GTU4_Y118y _1_1_118_118 A0A1B0GTU4 A0A1B0GTU4|A0A1B0GU60|P49023-3|F5GZ78|P49023-2 Paxillin GG20160819_MSz_CCLE_T4D7_pY_Injection_02.15779.15779.3 17.53 12.67 2.604 2 1 1 0 691.674 1993.0431 Y118y TMT10 111 (R) VGEEEHVySFPNK (Q) VGEEEHVY(0.99)S(0.0)FPNK K:TMT10,y:Phosphorylated Y PXN 117843.4 2 1 204.1 17.53 HUMAN 1 12.4988 6.3129 VGEGGGHSQARESGV-p Q9C0C2;S1248-p VGEGGGHSQARESGV 0.425998757587894 0.988931562210736 0.127 0.00233333333333335 6.82716489190527 0.0729653393749117 0.127 0.00233333333333336 0.207626847932459 0.983339457593103 1.43072411924534 0.0218627645752504 Q9C0C2 TNKS1BP1 Q9C0C2.S1248.p_TNKS1BP1 Q9C0C2_S1248s _1_1_1248_1248 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7349.7349.4 11.22 11.22 11.216 2 1 1 0 559.785 2156.146 S1248s TMT10 1235 (K) SKDLAEVGEGGGHsQAR (E) S(0.0)KDLAEVGEGGGHS(0.99)QAR K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 3 53 4.1 2105.7 HUMAN 1 6.8272 0.073 VGELDAVSPIVNETL-p Q9UPS6;S211-p VGELDAVSPIVNETL 0.678489956887424 0.0180328612293747 0.0693333333333333 0.391 3.15286353279611 24.017904461105 0.0693333333333334 0.391 0.483853232404156 0.00396469290751951 0.751293212800086 4.79358680138554 Q9UPS6 SETD1B Q9UPS6.S211.p_SETD1B Q9UPS6_S211s _1_1_211_211 Q9UPS6 Q9UPS6|Q9UPS6-2|A0A0A0MQV9 Histone-lysine N-methyltransferase SETD1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.37324.37324.3 24.94 22.32 3.488 6 1 1 0 1217.3143 3569.9719 S211s TMT10 197 (R) YTPQTLPVGELDAVsPIVNETLQLSDALK (R) Y(0.0)T(0.0)PQT(0.0)LPVGELDAVS(0.99)PIVNET(0.0)LQLS(0.0)DALK K:TMT10,s:Phosphorylated S SETD1B 213997.2 8 14 570.1 269.37 HUMAN 1 3.1529 24.0179 VGESNLPSPSPTVSV-p Q9NR48;S557-p VGESNLPSPSPTVSV 0.84768925371821 0.0500384684317076 -0.0383333333333334 0.361 1.38972046370453 17.3867976856716 -0.0383333333333334 0.361 0.726152695192667 0.0182524106622796 -0.368967974829204 3.33659540376612 Q9NR48 ASH1L Q9NR48.S557.p_ASH1L Q9NR48_S557s _1_1_557_557 Q9NR48 Q9NR48|Q9NR48-2 Histone-lysine N-methyltransferase ASH1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.27778.27778.4 23.47 23.47 1.108 8 1 1 0 713.111 2769.462 S557s TMT10 545 (K) SPFSAVGESNLPsPSPTVSVNPLTR (S) S(0.0)PFS(0.0)AVGES(0.0)NLPS(0.99)PS(0.0)PT(0.0)VS(0.0)VNPLT(0.0)R s:Phosphorylated S ASH1L 336378.7 2 4 245.1 412 HUMAN 1 -1.3897 17.3868 VGGAVLVSPSKMKPP-p Q8TC05;S543-p VGGAVLVSPSKMKPP 0.850329083846723 0.00264930192085164 0.0313333333333333 -0.810666666666667 1.36273308027972 39.2017774510836 0.0313333333333333 -0.810666666666667 0.730679111446503 0.000120177248063935 0.362544515007178 -9.77806260961871 Q8TC05 MDM1 Q8TC05.S543.p_MDM1 Q8TC05_S543s _1_1_543_543 Q8TC05 Q8TC05|Q8TC05-4 Nuclear protein MDM1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15666.15666.4 20.4 20.4 4.562 5 1 1 0 632.0934 2445.3866 S543s TMT10 527 (R) THHDLTTPAVGGAVLVsPSK (M) T(0.0)HHDLT(0.0)T(0.0)PAVGGAVLVS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S MDM1 81019 3 8 1888.1 108.98 HUMAN 1 1.3627 -39.2018 VGGDSTPSPDLLMAR-p Q5VWJ9;S40-p VGGDSTPSPDLLMAR 0.965995132801518 0.629602123155988 -0.00866666666666668 -0.0856666666666667 0.290067939363508 2.73169128441252 -0.00866666666666668 -0.0856666666666667 0.935391041134311 0.533127237914807 -0.0849033669483466 -0.665279542920473 Q5VWJ9 SNX30 Q5VWJ9.S40.p_SNX30 Q5VWJ9_S40s _1_1_40_40 Q5VWJ9 Q5VWJ9 Sorting nexin-30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22001.22001.4 21.08 21.08 1.865 6 1 1 0 809.1204 3153.503 S40s TMT10 19 (R) DMPHPLAGSSSEEAVGGDSTPsPDLLMAR (S) DMPHPLAGS(0.0)S(0.0)S(0.0)EEAVGGDS(0.0)T(0.0)PS(0.99)PDLLMAR s:Phosphorylated S SNX30 50018 2 2 2815.1 69.64 HUMAN 1 -0.2901 -2.7317 VGGFAPMSPRISSPM-p O00267;S666-p VGGFAPMSPRISSPM 0.834327857608735 0.0462662374074 -0.036 0.270333333333333 1.51684559259947 17.8600149921501 -0.036 0.270333333333333 0.705205094008805 0.0163681087103212 -0.398930812819912 3.43120871768404 O00267 SUPT5H O00267.S666.p_SUPT5H O00267_S666s _1_1_666_666 O00267 O00267|O00267-2 Transcription elongation factor SPT5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26013.26013.3 16.56 16.56 4.664 3 1 1 0 668.9875 1924.9788 S666s TMT10 653 (R) DVTNFTVGGFAPMsPR (I) DVT(0.0)NFT(0.0)VGGFAPMS(0.99)PR s:Phosphorylated S SUPT5H 121396.8 2 4 1946.1 105.81 HUMAN 1 -1.5168 17.86 VGGGVDGSRDELFRR-p Q9P2W9;S34-p VGGGVDGSRDELFRR 0.779917599367158 0.128699596765054 0.0406666666666667 -0.178333333333333 2.0750323429619 11.7414428004023 0.0406666666666667 -0.178333333333333 0.620150025229154 0.0669662099277321 0.525355109974226 -2.28544441526329 Q9P2W9 STX18 Q9P2W9.S34.p_STX18 Q9P2W9_S34s _1_1_34_34 Q9P2W9 Q9P2W9|D6RF48 Syntaxin-18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22186.22186.3 15.8 10.92 99 1 1 1 0 728.7067 2104.1348 S34s TMT10 22 (K) ALGVAVGGGVDGsRDELFR (R) ALGVAVGGGVDGS(1.0)RDELFR s:Phosphorylated S STX18 38844 2 1 2491.1 81.28 HUMAN 1 2.075 -11.7414 VGGLSPDTPEEKIRE-p Q14103;T193-p VGGLSPDTPEEKIRE 0.595851611109755 0.027998823473371 0.0796666666666667 0.291 4.1498136838588 21.0431415633879 0.0796666666666667 0.291 0.384608281723986 0.00786476668909956 0.9456604600715 4.10238577110592 Q14103 HNRNPD Q14103.T193.p_HNRNPD Q14103_T193t _1_1_193_193 Q14103 Q14103|Q14103-2|Q14103-3|Q14103-4 Heterogeneous nuclear ribonucleoprotein D0 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20621.20621.3 23.29 23.29 5.538 2 1 1 0 795.4416 2304.3418 T193t TMT10 183 (K) KIFVGGLSPDtPEEK (I) KIFVGGLS(0.0)PDT(0.99)PEEK K:TMT10,t:Phosphorylated T HNRNPD 38604.6 6 5 1392.1 147 HUMAN 1 4.1498 21.0431 VGGNLLCSYGTPPDS-p P78356;S319-p VGGNLLCSYGTPPDS 0.295125154480667 0.0683902820958578 0.245 0.325 9.98880691865571 15.4992980943463 0.245 0.325 0.10025806263233 0.0281883847441914 1.97976589335538 2.97061194437276 P78356 PIP4K2B P78356.S319.p_PIP4K2B P78356_S319s_1_1_319_319 P78356 P78356 Phosphatidylinositol 5-phosphate 4-kinase type-2 beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30577.30577.4 8.65 5.31 8.654 5 1 1 0 937.8936 3666.5959 N309n N315n S319s Hydrogen 302 (R) AEDEECEnDGVGGnLLCsYGTPPDSPGNLLSFPR (F) AEDEECEN(0.99)DGVGGN(0.99)LLCS(0.99)Y(0.0)GT(0.0)PPDS(0.0)PGN(0.0)LLS(0.0)FPR C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S PIP4K2B 47776.5 8 2 3550.1 48.45 HUMAN 1 9.9888 15.4993 VGGPGAKSAAQAAAQ-p Q8NC51;S53-p VGGPGAKSAAQAAAQ 0.532081809207476 0.0769706679382071 -0.159666666666667 0.223333333333333 5.07065103640695 14.7756366749744 -0.159666666666667 0.223333333333333 0.311124990502547 0.0332993941874862 -1.116989664357 2.83466071621246 Q8NC51 SERBP1 Q8NC51.S53.p_SERBP1 Q8NC51_S53s _1_1_53_53 Q8NC51 Q8NC51|Q8NC51-2|Q8NC51-3|Q8NC51-4 Plasminogen activator inhibitor 1 RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7008.7008.3 23.02 23.02 13.727 3 1 1 0 667.0049 1919.0347 S53s TMT10 53 (K) sAAQAAAQTNSNAAGK (Q) S(0.99)AAQAAAQT(0.0)NS(0.0)NAAGK K:TMT10,s:Phosphorylated S SERBP1 45021.6 1 2 616.1 261.14 HUMAN 1 -5.0707 14.7756 VGGPMDASVEEEGVR-p P01034;S43-p VGGPMDASVEEEGVR 0.0901040343669965 0.00609801306239028 0.419666666666667 0.691333333333333 22.248294251966 31.9545538393168 0.419666666666667 0.691333333333333 0.00595896143529481 0.000637594579224112 4.37893997392275 7.03743626223446 P01034 CST3 P01034.S43.p_CST3 P01034_S43s _1_1_43_43 P01034 P01034 Cystatin-C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15795.15795.3 18.03 18.03 99 1 1 1 0 704.0119 2030.0538 S43s TMT10 35 (R) LVGGPMDAsVEEEGVRR (A) LVGGPMDAS(1.0)VEEEGVRR s:Phosphorylated S CST3 16027.2 1 1 5576.1 18.03 HUMAN 1 22.2483 31.9546 VGGQEEASQEAGLPA-p Q99611;S97-p VGGQEEASQEAGLPA 0.0891404210042399 0.291782842043993 0.335 0.146 22.3564623795672 7.06095360930658 0.335 0.146 0.00581237681897653 0.19674542352495 4.40392263298606 1.47126862598194 Q99611 SEPHS2 Q99611.S97.p_SEPHS2 Q99611_S97s _1_1_97_97 Q99611 Q99611 Selenide, water dikinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.36907.36907.4 23.93 23.93 1.605 4 1 1 0 1054.7731 4136.0994 S97s TMT10 88 (R) GLVGGQEEAsQEAGLPAGAGPSPTFPALGIGMDSCVIPLR (H) GLVGGQEEAS(0.99)QEAGLPAGAGPS(0.0)PT(0.0)FPALGIGMDS(0.0)CVIPLR C:Carbamidomethylation,s:Phosphorylated S SEPHS2 47747 4 3 3602.1 47.29 HUMAN 1 22.3565 7.061 VGGSGGGSFGDNLVT-p P02545;S636-p VGGSGGGSFGDNLVT 0.331509205095072 0.26494710688299 0.135 0.127333333333333 8.95767762971058 7.59689747461243 0.135 0.127333333333333 0.127125372071473 0.173904272743706 1.8010365206026 1.56467444487579 P02545 LMNA P02545.S636.p_LMNA P02545_S636s _1_1_636_636 P02545 P02545|P02545-3|P02545-4|P02545-5 Prelamin-A/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15628.15628.3 20.08 20.08 5.581 4 1 1 0 625.9651 1795.9136 S636s TMT10 628 (R) SVGGSGGGsFGDNLVTR (S) S(0.0)VGGS(0.0)GGGS(0.99)FGDNLVT(0.0)R s:Phosphorylated S LMNA 74423.5 3 37 60.1 706.83 HUMAN 1 8.9577 7.5969 VGGVFHSTC______-p E9PNP3;T140-p VGGVFHSTC______ 0.375644567259488 0.200856639780602 0.173 -0.139333333333333 7.86215499374721 9.17140932210097 0.173 -0.139333333333333 0.163600452530068 0.12102053480143 1.61123875808965 -1.83736404478891 E9PNP3 AAMDC E9PNP3.T140.p_AAMDC E9PNP3_T140t _1_1_140_140 E9PNP3 E9PR47|E9PNP3|Q9H7C9|E9PIQ4 Mth938 domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13302.13302.2 15.16 15.16 1.705 2 1 1 0 636.7864 1192.5982 T140t TMT10 133 (R) VGGVFHStC (-) VGGVFHS(0.0)T(0.99)C C:Carbamidomethylation,t:Phosphorylated T AAMDC 15701.7 1 2 4514.1 30.44 HUMAN 1 7.8622 -9.1714 VGKAGTVSPGKEDPV-p Q7Z2K8;S452-p VGKAGTVSPGKEDPV 0.829871114376999 0.00584288757124063 -0.0326666666666667 -0.552333333333333 1.5586926421359 32.2832320886992 -0.0326666666666667 -0.552333333333333 0.698442624808139 0.000591121548365973 -0.408690906646974 -7.14554873784507 Q7Z2K8 GPRIN1 Q7Z2K8.S452.p_GPRIN1 Q7Z2K8_S452s _1_1_452_452 Q7Z2K8 Q7Z2K8|Q7Z2K8-2 G protein-regulated inducer of neurite outgrowth 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8771.8771.3 12.6 5.97 2.118 4 1 1 0 675.6868 1945.0755 S452s TMT10 448 (K) AGTVsPGKEDPVSSR (R) AGT(0.0)VS(0.99)PGKEDPVS(0.0)S(0.0)R K:TMT10,s:Phosphorylated S GPRIN1 103196.3 5 12 292.1 381.4 HUMAN 1 -1.5587 -32.2832 VGKFLGDSANLSILS-p P30307;S57-p VGKFLGDSANLSILS 0.325731912858787 0.0193146749978805 -0.222333333333333 -0.479333333333333 9.121456767231 23.5511776404886 -0.222333333333333 -0.479333333333333 0.122420549140336 0.00441450726573557 -1.8293897875098 -4.68054208895543 P30307 CDC25C P30307.S57.p_CDC25C P30307_S57s _1_1_57_57 P30307 P30307|P30307-2 M-phase inducer phosphatase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30409.30409.3 17.81 17.81 2.376 4 1 1 0 739.0648 2135.2112 S57s TMT10 53 (K) FLGDsANLSILSGGTPK (R) FLGDS(0.99)ANLS(0.0)ILS(0.0)GGT(0.0)PK K:TMT10,s:Phosphorylated S CDC25C 54219.5 1 1 1847.1 111.23 HUMAN 1 -9.1215 -23.5512 VGKHIMKSCAISNVK-p O75891-3;S671-p VGKHIMKSCAISNVK 0.334837228172211 0.00608892743356031 0.154 0.606 8.86848679422098 31.9718395168239 0.154 0.606 0.129763132397008 0.000635061885269012 1.78559751341331 7.04308793603945 O75891 ALDH1L1 O75891.3.S671.p_ALDH1L1 O75891-3_S671s _1_1_671_671 O75891-3 O75891-3|O75891-2 Isoform 3 of Cytosolic 10-formyltetrahydrofolate dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7591.7591.3 7.47 7.47 2.751 2 1 1 0 719.0621 2075.2072 S671s TMT10 667 (K) HIMKsCAISNVK (K) HIMKS(0.99)CAIS(0.0)NVK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ALDH1L1 100607.3 4 1 7146.1 7.47 HUMAN 1 8.8685 31.9718 VGKISVSSDSVSTLN-p Q9Y3P9;S14-p VGKISVSSDSVSTLN 0.933635471890553 0.895004194622648 0.0133333333333333 -0.0146666666666666 0.587003653656931 0.676137238228377 0.0133333333333333 -0.0146666666666666 0.873573869046728 0.855827576411125 0.166812614957948 -0.190525960542737 Q9Y3P9 RABGAP1 Q9Y3P9.S14.p_RABGAP1 Q9Y3P9_S14s _1_1_14_14 Q9Y3P9 Q9Y3P9|Q9Y3P9-3|Q9Y3P9-4|C9JGR5 Rab GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.28680.28680.3 18.09 18.09 1.143 8 1 1 0 850.7571 2470.2874 S14s TMT10 10 (K) ISVSsDSVSTLNSEDFVLVSR (Q) IS(0.0)VS(0.0)S(0.99)DS(0.0)VS(0.0)T(0.0)LNS(0.0)EDFVLVS(0.0)R s:Phosphorylated S RABGAP1 122989.9 2 2 520.1 284.17 HUMAN 1 0.587 -0.6761 VGKKLHEYNTQFQEK-p P27986-4;Y452-p VGKKLHEYNTQFQEK 0.406951825571211 0.0611842459637312 0.137 -0.227 7.21137951355179 16.155503848039 0.137 -0.227 0.190047450831629 0.0242353678090138 1.49796571365177 -3.09589191427502 P27986 PIK3R1 P27986.4.Y452.p_PIK3R1 P27986-4_Y452y _1_1_452_452 P27986-4 P27986-4|P27986-2|P27986-3|P27986-5 Isoform 4 of Phosphatidylinositol 3-kinase regulatory subunit alpha GG20160819_MSz_CCLE_T4D7_pY_Injection_01.12884.12884.3 19.4 19.4 5.308 2 1 1 0 658.9931 1895.0063 Y452y TMT10 449 (K) LHEyNTQFQEK (S) LHEY(0.99)NT(0.0)QFQEK K:TMT10,y:Phosphorylated Y PIK3R1 84872.2 6 2 9.1 106.64 HUMAN 1 7.2114 -16.1555 VGKTPEASPEPKDQT-p A0A087WW66;S315-p VGKTPEASPEPKDQT 0.0784128731043604 0.220492176640501 -0.694666666666667 -0.161666666666667 23.599464348807 8.6447698277483 -0.694666666666667 -0.161666666666667 0.00436569674657266 0.136622748262534 -4.69758741905173 -1.74627011223038 A0A087WW66 NotFound A0A087WW66.S315.p_NotFound A0A087WW66_S315s _1_1_315_315 A0A087WW66 Q99460|A0A087WW66|Q99460-2 26S proteasome non-ATPase regulatory subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15400.15400.5 19.88 19.88 5.663 6 1 1 0 663.7687 3234.8392 S315s TMT10 303 (K) TSSAFVGKTPEAsPEPKDQTLK (M) T(0.0)S(0.0)S(0.0)AFVGKT(0.0)PEAS(0.99)PEPKDQT(0.0)LK K:TMT10,s:Phosphorylated S PSMD1 106876.4 6 5 1299.1 156.53 HUMAN 1 -23.5995 -8.6448 VGLLKDMSPLSETEM-p E7EVA0;S524-p VGLLKDMSPLSETEM 0.362926296935609 0.0206907854655544 -0.150666666666667 -0.367666666666667 8.17726423034376 23.0420746153864 -0.150666666666667 -0.367666666666667 0.152150567644235 0.00496355157018903 -1.66589797317473 -4.55926245754698 E7EVA0 NotFound E7EVA0.S524.p_NotFound E7EVA0_S524s _1_1_524_524 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.34015.34015.3 19.34 14.69 1.262 5 1 1 0 1265.334 3714.02 S524s TMT10 522 (K) DMsPLSETEMALGKDVTPPPETEVVLIK (N) DMS(0.99)PLS(0.0)ET(0.0)EMALGKDVT(0.0)PPPET(0.0)EVVLIK K:TMT10,s:Phosphorylated S MAP4 246695.2 26 12 38.1 865.62 HUMAN 1 -8.1773 -23.0421 VGLPKSLTDSCLFEK-p Q9UKA4;T1485-p VGLPKSLTDSCLFEK 0.0680523400848422 0.0833142278538312 -0.543 -0.245 25.1937559894875 14.2876968749811 -0.543 -0.245 0.00302429673812464 0.0372589243213313 -5.09301718928048 -2.74420741970987 Q9UKA4 AKAP11 Q9UKA4.T1485.p_AKAP11 Q9UKA4_T1485t _1_1_1485_1485 Q9UKA4 Q9UKA4 A-kinase anchor protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22587.22587.3 8.18 8.18 1.136 3 1 1 0 579.9571 1657.8871 T1485t TMT10 1483 (K) SLtDSCLFEK (S) S(0.0)LT(0.99)DS(0.0)CLFEK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T AKAP11 213075.9 1 12 688.1 243.29 HUMAN 1 -25.1938 -14.2877 VGLTETKSMIFSPAS-p Q9P246-2;S756-p VGLTETKSMIFSPAS 0.688556301099824 0.5816390227545 -0.12 -0.0536666666666667 3.04051895660933 3.17731323608917 -0.12 -0.0536666666666667 0.49653298510569 0.481136911868625 -0.728630206823134 -0.756092383245546 Q9P246 STIM2 Q9P246.2.S756.p_STIM2 Q9P246-2_S756s _1_1_756_756 Q9P246-2 Q9P246-2|H0Y860|A0A1W2PRA1|A0A1X7SBY3 Isoform 2 of Stromal interaction molecule 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20642.20642.3 15.38 13.08 6.102 3 1 1 0 502.5998 1425.8176 S756s TMT10 756 (K) sMIFSPASK (V) S(0.99)MIFS(0.0)PAS(0.0)K K:TMT10,s:Phosphorylated S STIM2 94867.7 5 5 1100.1 177.78 HUMAN 1 -3.0405 -3.1773 VGLTRGYSPHQHPRT-p Q13796;S779-p VGLTRGYSPHQHPRT 0.90916953958039 0.0404183932092376 0.0523333333333333 0.277333333333333 0.812177203616588 18.6841412318354 0.0523333333333334 0.277333333333333 0.829434851272673 0.0135389778216091 0.226077957281515 3.59898154505182 Q13796 SHROOM2 Q13796.S779.p_SHROOM2 Q13796_S779s _1_1_779_779 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3466.3466.2 11.82 7.06 4.886 2 1 1 0 694.3271 1307.6806 S779s TMT10 777 (R) GYsPHQHPR (T) GY(0.0)S(0.99)PHQHPR s:Phosphorylated S SHROOM2 177605.1 2 13 90.1 622.62 HUMAN 1 0.8122 18.6841 VGLVAENSRSTQRLM-p P18858;S386-p VGLVAENSRSTQRLM 0.442299902006713 0.167788200693427 -0.102666666666667 -0.227333333333333 6.52717869563508 10.1969774491653 -0.102666666666667 -0.227333333333333 0.222475468722269 0.095565746168806 -1.37796708019592 -2.01512085099568 P18858 LIG1 P18858.S386.p_LIG1 P18858_S386sS388sT389t_3_3_386_389 P18858 P18858|P18858-3|F5GZ28 DNA ligase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18231.18231.5 8.09 5.85 7.592 6 3 3 0 739.7618 3453.8725 N385n S386s S388s T389t Hydrogen 377 (K) GDVGLVAEnsRstQRLMLPPPPLTASGVFSK (F) GDVGLVAEN(1.0)S(0.99)RS(0.99)T(0.99)QRLMLPPPPLT(0.0)AS(0.0)GVFS(0.0)K K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S,t:Phosphorylated T LIG1 102361.8 1 23 302.1 376.44 HUMAN 1 -6.5272 -10.197 VGMADANSPPKPLSK-p P26358;S127-p VGMADANSPPKPLSK 0.929287129544062 0.00191137765323525 0.0136666666666667 -0.846666666666667 0.63197186968699 42.6243245618333 0.0136666666666667 -0.846666666666667 0.864575278080757 5.46471533468981e-05 0.1788312478868 -11.3771305021639 P26358 DNMT1 P26358.S127.p_DNMT1 P26358_S127s _1_1_127_127 P26358 P26358-2 DNA (cytosine-5)-methyltransferase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.13706.13922.4 20.03 16.94 17.517 2 1 1 0 633.8555 2452.4313 S127s TMT10 120 (R) VGMADANsPPKPLSKPR (T) VGMADANS(0.99)PPKPLS(0.0)KPR K:TMT10,s:Phosphorylated S DNMT1 185501.2 27 1 431.1 316.29 HUMAN 1 0.632 -42.6243 VGMPSPVSPKLSPGN-p Q9UHB7;S1058-p VGMPSPVSPKLSPGN 0.739412668523583 0.682618548347328 -0.0456666666666667 0.0433333333333334 2.48503696824186 2.26889521298169 -0.0456666666666667 0.0433333333333334 0.564282138012755 0.593076176030928 -0.613725820266788 0.56749111486097 Q9UHB7 AFF4 Q9UHB7.S1058.p_AFF4 Q9UHB7_S1058s _1_1_1058_1058 Q9UHB7 Q9UHB7 AF4/FMR2 family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17618.17618.2 14.65 14.65 2.625 2 1 1 0 804.4357 1527.8969 S1058s TMT10 1050 (K) AVGMPSPVsPK (L) AVGMPS(0.0)PVS(0.99)PK K:TMT10,s:Phosphorylated S AFF4 127856.3 9 23 137.1 525.98 HUMAN 1 -2.485 2.2689 VGMVETNSQDRPVDD-p Q9Y3C6;S149-p VGMVETNSQDRPVDD 0.244674983927803 0.0223761793236319 0.185666666666667 0.355 11.6968210654661 22.5410335488893 0.185666666666667 0.355 0.0676578033558871 0.00557053163735344 2.27867167673818 4.4419118292771 Q9Y3C6 PPIL1 Q9Y3C6.S149.p_PPIL1 Q9Y3C6_S149s _1_1_149_149 Q9Y3C6 Q9Y3C6 Peptidyl-prolyl cis-trans isomerase-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14647.14647.3 17.33 15.42 1.112 2 1 1 0 809.7375 2347.2328 S149s TMT10 142 (R) VGMVETNsQDRPVDDVK (I) VGMVET(0.0)NS(0.99)QDRPVDDVK K:TMT10,s:Phosphorylated S PPIL1 18350.6 2 1 5672.1 17.33 HUMAN 1 11.6968 22.541 VGNLCRRSILGTPLS-p Q9NXD2;S751-p VGNLCRRSILGTPLS 0.0360407965324359 0.333790285701479 -0.592333333333333 -0.178333333333333 33.3313543456305 6.31616791185186 -0.592333333333333 -0.178333333333333 0.000464370438901962 0.233551794643929 -7.51331381359044 -1.34036204189954 Q9NXD2 MTMR10 Q9NXD2.S751.p_MTMR10 Q9NXD2_S751s _1_1_751_751 Q9NXD2 Q9NXD2 Myotubularin-related protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18604.18604.2 14.42 8.1 5.99 3 1 1 0 612.8446 1144.7139 S751s Hydrogen 751 (R) sILGTPLSK (F) S(0.99)ILGT(0.0)PLS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S MTMR10 89241.4 3 4 2754.1 71.76 HUMAN 1 -33.3314 -6.3162 VGPAPSLSELDLRPP-p Q5FWE3;S800-p VGPAPSLSELDLRPP 0.625013303091146 0.68014062644245 0.0843333333333333 0.04 3.79073994784512 2.28781039269393 0.0843333333333333 0.04 0.417759183070617 0.590498720248133 0.876911895418359 0.571566711103694 Q5FWE3 PRRT3 Q5FWE3.S800.p_PRRT3 Q5FWE3_S800sS808s_2_2_800_808 Q5FWE3 Q5FWE3|Q5FWE3-2 Proline-rich transmembrane protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30635.30635.4 15.14 15.14 1.194 4 2 2 0 719.6133 2715.4991 S800s S808s TMT10 791 (R) NGVGPAPSLsELDLRPPsPINLSR (S) NGVGPAPS(0.0)LS(0.99)ELDLRPPS(0.99)PINLS(0.0)R s:Phosphorylated S PRRT3 102765.9 5 12 931.1 199.28 HUMAN 1 3.7907 2.2878 VGPATNESPGIDYVQ-p O14893;S166-p VGPATNESPGIDYVQ 0.625698374773997 0.382179244375475 0.0726666666666667 0.092 3.78253479141206 5.54959287360256 0.0726666666666667 0.092 0.418549204518186 0.278638236389943 0.87532581118111 1.20362224796941 O14893 GEMIN2 O14893.S166.p_GEMIN2 O14893_S166s _1_1_166_166 O14893 O14893|O14893-3 Gem-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.37221.37221.3 34.95 34.95 2.161 5 1 1 0 1241.6262 3642.9039 S166s TMT10 153 (K) LCADGAVGPATNEsPGIDYVQIGFPPLLSIVSR (M) LCADGAVGPAT(0.0)NES(0.99)PGIDY(0.0)VQIGFPPLLS(0.0)IVS(0.0)R C:Carbamidomethylation,s:Phosphorylated S GEMIN2 32041 5 5 1657.1 123.25 HUMAN 1 3.7825 5.5496 VGPCRSGTPDPRDGE-p Q2YD98;T242-p VGPCRSGTPDPRDGE 0.049158581421578 0.00366823110692036 0.495 0.980333333333333 29.004520575819 36.1643384506912 0.495 0.980333333333333 0.00125761567678263 0.000241861173060569 6.13487227758182 8.5328867110621 Q2YD98 UVSSA Q2YD98.T242.p_UVSSA Q2YD98_T242t _1_1_242_242 Q2YD98 Q2YD98 UV-stimulated scaffold protein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.4640.4640.3 13.64 6.19 2.023 3 1 1 0 709.9648 2047.9123 T242t TMT10 240 (R) SGtPDPRDGEQPCCSR (D) S(0.0)GT(0.99)PDPRDGEQPCCS(0.0)R C:Carbamidomethylation,t:Phosphorylated T UVSSA 81388.8 3 2 2615.1 76.7 HUMAN 1 29.0045 36.1643 VGPEVGASPQSGRKS-p Q86X27;S308-p VGPEVGASPQSGRKS 0.566958552488247 0.0633810096215652 0.0976666666666667 0.219 4.54023189659117 15.951502573305 0.0976666666666667 0.219 0.351541669050739 0.0254009373114018 1.01908610989624 3.05673203307356 Q86X27 RALGPS2 Q86X27.S308.p_RALGPS2 Q86X27_S308s _1_1_308_308 Q86X27 Q86X27|Q86X27-3 Ras-specific guanine nucleotide-releasing factor RalGPS2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9736.9736.3 15.06 11.11 13.922 4 1 1 0 912.8081 2656.4419 S308s TMT10 293 (R) SAASREDLVGPEVGAsPQSGRK (S) S(0.0)AAS(0.0)REDLVGPEVGAS(0.99)PQS(0.0)GRK K:TMT10,s:Phosphorylated S RALGPS2 65508.3 5 5 614.1 261.34 HUMAN 1 4.5402 15.9515 VGPPRKKSPNELVDD-p Q9UNZ2;S114-p VGPPRKKSPNELVDD 0.681400109804232 0.0395666397756338 -0.0566666666666667 0.334333333333333 3.12541546186455 18.8102600103464 -0.0566666666666667 0.334333333333333 0.486920942313086 0.0131514609257158 -0.745772483786502 3.62500575257011 Q9UNZ2 NSFL1C Q9UNZ2.S114.p_NSFL1C Q9UNZ2_S114s _1_1_114_114 Q9UNZ2 Q9UNZ2-5|Q9UNZ2-4|F2Z2K0 NSFL1 cofactor p47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32660.32660.3 17.69 10.31 99 1 1 1 0 605.6494 1734.9678 S114s TMT10 114 (K) sPNELVDDLFK (G) S(1.0)PNELVDDLFK K:TMT10,s:Phosphorylated S NSFL1C 40572.1 26 2 1108.1 176.24 HUMAN 1 -3.1254 18.8103 VGPTEYLSPDMQRQR-p Q8IX15-3;S353-p VGPTEYLSPDMQRQR 0.453195332145344 0.123806330206688 -0.147666666666667 -0.201333333333333 6.34043426426669 11.9692411522552 -0.147666666666667 -0.201333333333333 0.232250455044915 0.0635441953655615 -1.34499031090842 -2.325723076382 Q8IX15 HOMEZ Q8IX15.3.S353.p_HOMEZ Q8IX15-3_S353s _1_1_353_353 Q8IX15-3 Q8IX15-3 Isoform 2 of Homeobox and leucine zipper protein Homez HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18099.18099.3 15.39 15.39 4.199 3 1 1 0 601.2866 1721.873 S353s TMT10 346 (R) VGPTEYLsPDMQR (Q) VGPT(0.0)EY(0.0)LS(0.99)PDMQR s:Phosphorylated S HOMEZ 62093.3 1 2 1600.1 128.63 HUMAN 1 -6.3404 -11.9692 VGQACNPSACRAVGR-p P21333-2;S481-p VGQACNPSACRAVGR 0.129743482415132 0.378325849004378 0.329 0.163333333333333 18.366624194387 5.60750828059599 0.329 0.163333333333333 0.0145659086033633 0.274947118114089 3.53684667128274 1.21404315398863 P21333 FLNA P21333.2.S481.p_FLNA P21333-2_S481s _1_1_481_481 P21333-2 P21333-2|Q60FE5|Q5HY54|A0A087WWY3 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13121.13121.3 12.9 12.9 4.832 5 1 1 0 726.3288 2097.0055 S481s TMT10 468 (R) SPYTVTVGQACNPsACR (A) S(0.0)PY(0.0)T(0.0)VT(0.0)VGQACNPS(0.99)ACR C:Carbamidomethylation,s:Phosphorylated S FLNA 282751.6 1 2 198.1 454.47 HUMAN 1 18.3666 5.6075 VGQMENISPGQIIDE-p Q9Y4I1-3;S1477-p VGQMENISPGQIIDE 0.485364786960928 0.796041429659667 0.0933333333333333 -0.0286666666666667 5.78512524288853 1.38320047542982 0.0933333333333334 -0.0286666666666667 0.263929220872395 0.727243674459465 1.24618923150394 -0.367379849930173 Q9Y4I1 MYO5A Q9Y4I1.3.S1477.p_MYO5A Q9Y4I1-3_S1477s _1_1_1477_1477 Q9Y4I1-3 Q9Y4I1-3|F8WE88|F8W6H6|G3V394|Q9Y4I1-2 Isoform 3 of Unconventional myosin-Va HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.29141.29141.5 23.22 23.22 99 1 1 1 0 776.8223 3800.1145 S1477s TMT10 1464 (K) KIGELEVGQMENIsPGQIIDEPIRPVNIPR (K) KIGELEVGQMENIS(1.0)PGQIIDEPIRPVNIPR K:TMT10,s:Phosphorylated S MYO5A 220315.4 5 68 296.5 379.15 HUMAN 1 5.7851 -1.3832 VGQSPLRSPLKRQAS-p Q2LD37;S1305-p VGQSPLRSPLKRQAS 0.0866557243462627 0.0173223641138069 -0.593 -0.548 22.6993409673418 24.3028330528926 -0.593 -0.548 0.00537113295989019 0.00371292942870386 -4.48370932729544 -4.86349460117928 Q2LD37 KIAA1109 Q2LD37.S1305.p_KIAA1109 Q2LD37_S1305s _1_1_1305_1305 Q2LD37 Q2LD37|Q2LD37-4|Q2LD37-7|Q2LD37-6|Q2LD37-2 Uncharacterized protein KIAA1109 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13316.13316.3 11.44 6.65 2.483 3 1 1 0 603.0123 1727.058 S1305s TMT10 1297 (K) SVGQSPLRsPLK (R) S(0.0)VGQS(0.0)PLRS(0.99)PLK K:TMT10,s:Phosphorylated S KIAA1109 559693.9 1 5 143.1 520.8 HUMAN 1 -22.6993 -24.3028 VGREARISPLGDRSQ-p Q8NDB6;S114-p VGREARISPLGDRSQ 0.384620913819272 0.845551897637767 -0.125666666666667 -0.024 7.68257086032882 1.02437122305242 -0.125666666666667 -0.024 0.170507275112669 0.789883201393106 -1.58004181878489 -0.279952903680205 Q8NDB6 FAM156A Q8NDB6.S114.p_FAM156A Q8NDB6_S114s _1_1_114_114 Q8NDB6 Q8NDB6 Protein FAM156A/FAM156B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9379.9379.3 10.14 7.49 99 1 1 1 0 474.9155 1342.764 S114s TMT10 110 (R) EARIsPLGDR (S) EARIS(1.0)PLGDR s:Phosphorylated S FAM156A 24582.2 1 2 5366.1 20.04 HUMAN 1 -7.6826 -1.0244 VGRFFGNSWAETYRN-p O43488;S255-p VGRFFGNSWAETYRN 0.524426951089082 0.0218261778734971 -0.152333333333333 0.359666666666667 5.18652872620116 22.705482949844 -0.152333333333333 0.359666666666667 0.302933377788725 0.0053635422375822 -1.13813319291722 4.48021210348505 O43488 AKR7A2 O43488.S255.p_AKR7A2 O43488_S255s _1_1_255_255 O43488 O43488 Aflatoxin B1 aldehyde reductase member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26162.26162.2 16.77 16.77 2.338 3 1 1 0 843.8795 1606.7852 S255s TMT10 251 (R) FFGNsWAETYR (N) FFGNS(0.99)WAET(0.0)Y(0.0)R s:Phosphorylated S AKR7A2 40044.7 3 2 3668.1 45.68 HUMAN 1 -5.1865 22.7055 VGRNFGSYVTHETKH-p P63167;Y65-p VGRNFGSYVTHETKH 0.188778224113783 0.0681829439196278 -0.205 0.411666666666667 14.1897119584484 15.516002620618 -0.205 0.411666666666667 0.0381091098048559 0.028080170337036 -2.72781687618618 2.97377683412514 P63167 DYNLL1 P63167.Y65.p_DYNLL1 P63167_Y65y _1_1_65_65 P63167 P63167|Q96FJ2 Dynein light chain 1, cytoplasmic GG20160819_MSz_CCLE_T4D7_pY_Injection_01.14195.14195.3 12.2 12.2 1.633 4 1 1 0 607.6366 1740.9321 Y65y TMT10 61 (R) NFGSyVTHETK (H) NFGS(0.0)Y(0.99)VT(0.0)HET(0.0)K K:TMT10,y:Phosphorylated Y DYNLL1 10536.9 2 1 290.1 12.2 HUMAN 1 -14.1897 15.516 VGRRLRDSLGRTVDL-p Q9H845;S474-p VGRRLRDSLGRTVDL 0.192627910278709 0.00163920734354588 0.265 1.229 13.9615792077384 44.3856054937765 0.265 1.229 0.0401644735815586 3.64283458093762e-05 2.68586707015255 12.2914335463457 Q9H845 ACAD9 Q9H845.S474.p_ACAD9 Q9H845_S474s _1_1_474_474 Q9H845 Q9H845 Acyl-CoA dehydrogenase family member 9, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6918.6918.2 9.33 1.03 99 1 1 1 0 563.3028 1045.6316 S474s TMT10 471 (R) LRDsLGR (T) LRDS(1.0)LGR s:Phosphorylated S ACAD9 69386.7 3 2 4500.1 30.65 HUMAN 1 13.9616 44.3856 VGSGQGGSPCWKKQE-p Q9UMN6;S351-p VGSGQGGSPCWKKQE 0.719908473757462 0.0117543910620516 -0.0616666666666667 -0.510333333333333 2.6945817024369 26.9743404509423 -0.0616666666666667 -0.510333333333333 0.537702220263558 0.00200708587654907 -0.657665081216899 -5.55417539996875 Q9UMN6 KMT2B Q9UMN6.S351.p_KMT2B Q9UMN6_S351s _1_1_351_351 Q9UMN6 Q9UMN6|Q9UMN6-2 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13892.13892.2 13.45 11.04 10.78 2 1 1 0 879.426 1677.8783 S351s TMT10 344 (R) VGSGQGGsPCWK (K) VGS(0.0)GQGGS(0.99)PCWK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KMT2B 297845.7 6 2 388.1 332.76 HUMAN 1 -2.6946 -26.9743 VGSISPASPKISLAP-p Q8WWM7-3;S496-p VGSISPASPKISLAP 0.135600070487343 0.428206884963389 -0.457 -0.088 17.7994872900457 4.90444768833687 -0.457 -0.088 0.0165978284291244 0.32326242845045 -3.42179851548328 -1.08630219808685 Q8WWM7 ATXN2L Q8WWM7.3.S496.p_ATXN2L Q8WWM7-3_S496s _1_1_496_496 Q8WWM7-3 Q8WWM7-3|H3BUF6|Q8WWM7-2|Q8WWM7-9|Q8WWM7-4|Q8WWM7-5|Q8WWM7-8|Q8WWM7-6 Isoform 3 of Ataxin-2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.27421.27421.5 17.05 17.05 2.397 15 1 1 0 982.9025 4830.5123 S496s TMT10 452 (K) SAAPAPISASCPEPPIGSAVPTSSASIPVTSSVSDPGVGSISPAsPK (I) S(0.0)AAPAPIS(0.0)AS(0.0)CPEPPIGS(0.0)AVPT(0.0)S(0.0)S(0.0)AS(0.0)IPVT(0.0)S(0.0)S(0.0)VS(0.0)DPGVGS(0.0)IS(0.0)PAS(0.99)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ATXN2L 116093.7 1 18 184.1 476.17 HUMAN 1 -17.7995 -4.9044 VGSPTLLSPAVPSKQ-p Q8IY92;S1075-p VGSPTLLSPAVPSKQ 0.480213422540993 0.192952192907279 -0.0933333333333333 -0.203 5.86449130128558 9.3961599699101 -0.0933333333333334 -0.203 0.259149795145395 0.114916926742523 -1.26038598851946 -1.8762572492092 Q8IY92 SLX4 Q8IY92.S1075.p_SLX4 Q8IY92_S1075s _1_1_1075_1075 Q8IY92 Q8IY92|Q8IY92-2 Structure-specific endonuclease subunit SLX4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20285.20285.3 11.69 10.22 3.319 6 1 1 0 774.4232 2241.2855 S1075s TMT10 1063 (R) GGTSQVGSPTLLsPAVPSK (Q) GGT(0.0)S(0.0)QVGS(0.0)PT(0.0)LLS(0.99)PAVPS(0.0)K K:TMT10,s:Phosphorylated S SLX4 201834.1 1 14 218.1 430.83 HUMAN 1 -5.8645 -9.3962 VGTCLYASPEQLEGS-p Q9BQI3;S498-p VGTCLYASPEQLEGS 0.853882071868074 0.900704656188545 -0.0266666666666667 0.014 1.32981309405088 0.63566819001707 -0.0266666666666667 0.014 0.736238782089645 0.8638397431543 -0.354678334080585 0.179797992905166 Q9BQI3 EIF2AK1 Q9BQI3.S498.p_EIF2AK1 Q9BQI3_S498s _1_1_498_498 Q9BQI3 Q9BQI3|Q9BQI3-2 Eukaryotic translation initiation factor 2-alpha kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22270.22270.3 12.47 12.47 2.577 5 1 1 0 919.1052 2675.3275 S498s TMT10 491 (R) VGTCLYAsPEQLEGSEYDAK (S) VGT(0.0)CLY(0.0)AS(0.99)PEQLEGS(0.0)EY(0.0)DAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EIF2AK1 71675.7 1 5 2626.1 76.5 HUMAN 1 -1.3298 0.6357 VGTNAMDSPLLKYSA-p P54920;S195-p VGTNAMDSPLLKYSA 0.333786889239705 0.600729501537864 -0.146666666666667 0.0836666666666667 8.89491961897167 3.00029010929011 -0.146666666666667 0.0836666666666667 0.128975742904457 0.50115375537176 -1.79017300050086 0.720370110402854 P54920 NAPA P54920.S195.p_NAPA P54920_S195s_1_1_195_195 P54920 P54920|M0R0Y2 Alpha-soluble NSF attachment protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26477.26477.3 19.81 19.81 1.666 3 1 1 0 878.1154 2536.3733 M193m S195s TMT10 181 (K) AIDIYEQVGTNAmDsPLLK (Y) AIDIY(0.0)EQVGT(0.0)NAM(1.0)DS(0.99)PLLK K:TMT10,m:Oxidized methionine,s:Phosphorylated S NAPA 33688.6 9 2 4259.1 34.55 HUMAN 1 -8.8949 3.0003 VGTVLEGSPEWAAAR-p A0A087WWL5;S778-p VGTVLEGSPEWAAAR 0.742912036864882 0.840412671405299 0.0496666666666667 -0.0213333333333333 2.45223562098665 1.06155488189527 0.0496666666666667 -0.0213333333333333 0.568560177347658 0.783149205739663 0.606776886576459 -0.2892196115847 A0A087WWL5 C19orf68 A0A087WWL5.S778.p_C19orf68 A0A087WWL5_S778s_1_1_778_778 A0A087WWL5 A0A087WWL5 Uncharacterized protein ZSWIM9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31277.31277.3 10.16 6.06 2.001 4 1 1 0 1022.1781 2983.5509 N763n S778s TMT10 758 (R) CLGLGnGVVSGTPVGTVLEGsPEWAAAR (S) CLGLGN(1.0)GVVS(0.0)GT(0.0)PVGT(0.0)VLEGS(0.99)PEWAAAR C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S ZSWIM9 103048.9 1 1 6684.1 10.16 HUMAN 1 2.4522 -1.0616 VGVARKHSDNEAESI-p Q92576;S1148-p VGVARKHSDNEAESI 0.440346917769071 0.0281589834290621 0.113333333333333 -0.291 6.56476693973675 21.0078673172937 0.113333333333333 -0.291 0.220558249383585 0.00792890598364618 1.38459155326172 -4.09458585010038 Q92576 PHF3 Q92576.S1148.p_PHF3 Q92576_S1148s _1_1_1148_1148 Q92576 Q92576|Q92576-2 PHD finger protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.35480.35480.5 33.39 30.11 1.227 8 1 1 0 973.6894 4784.456 S1148s TMT10 1146 (R) KHsDNEAESIADALSSTSNILASEFFEEEKQESPK (S) KHS(0.99)DNEAES(0.0)IADALS(0.0)S(0.0)T(0.0)S(0.0)NILAS(0.0)EFFEEEKQES(0.0)PK K:TMT10,s:Phosphorylated S PHF3 231702.4 3 8 96.1 606.54 HUMAN 1 6.5648 -21.0079 VGVKRTSSPHKEESP-p P51003;S654-p VGVKRTSSPHKEESP 0.15862830639328 0.00251033355566783 0.301666666666667 0.940333333333333 16.0188462256875 39.7453822382031 0.301666666666667 0.940333333333333 0.0250100970757382 0.000106038060635185 3.07180979225625 10.0174232601692 P51003 PAPOLA P51003.S654.p_PAPOLA P51003_S654s _1_1_654_654 P51003 P51003|G3XAH6 Poly(A) polymerase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.3538.3538.4 15.52 11.16 1.122 4 1 1 0 499.2701 1914.09 S654s TMT10 652 (R) TSsPHKEESPK (K) T(0.0)S(0.0)S(0.99)PHKEES(0.0)PK K:TMT10,s:Phosphorylated S PAPOLA 83297.5 19 7 1658.1 123.25 HUMAN 1 16.0188 39.7454 VGVLCTDSQGLNLGC-p O43504;S26-p VGVLCTDSQGLNLGC 0.337942302339887 0.0421227895274775 0.168 0.259666666666667 8.7738961195133 18.4324080964495 0.168 0.259666666666667 0.132620416668087 0.0143469369705987 1.76922403103516 3.54731867222855 O43504 LAMTOR5 O43504.S26.p_LAMTOR5 O43504_S26s _1_1_26_26 O43504 A0A0C4DGV4|O43504|E9PLX3|R4GMU8 Ragulator complex protein LAMTOR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26595.26595.4 25.63 25.63 1.623 3 1 1 0 618.0502 2389.2165 S26s TMT10 15 (K) NPSIVGVLCTDsQGLNLGCR (G) NPS(0.0)IVGVLCT(0.0)DS(0.99)QGLNLGCR C:Carbamidomethylation,s:Phosphorylated S LAMTOR5 9784.9 7 1 3079.1 61.33 HUMAN 1 8.7739 18.4324 VGVMEMRSPLLAGGS-p Q8NFH5;S66-p VGVMEMRSPLLAGGS 0.146674740935683 0.0209988301465213 -0.245333333333333 -0.315 16.9476637497876 22.9488802616783 -0.245333333333333 -0.315 0.0201945241878401 0.00507121442175134 -3.25233382049407 -4.5372860253427 Q8NFH5 NUP35 Q8NFH5.S66.p_NUP35 Q8NFH5_S66sS73s_2_2_66_73 Q8NFH5 Q8NFH5|Q8NFH5-2|F8WEL4|F8WCF5 Nucleoporin NUP53 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25607.25607.5 26.1 26.1 5.85 5 2 2 0 740.9819 3540.9435 S66s S73s TMT10 53 (R) SISGPSVGVMEMRsPLLAGGsPPQPVVPAHK (D) S(0.0)IS(0.0)GPS(0.0)VGVMEMRS(0.99)PLLAGGS(0.99)PPQPVVPAHK K:TMT10,s:Phosphorylated S NUP35 34887.3 3 17 627.1 257.69 HUMAN 1 -16.9477 -22.9489 VGVPPPASPSYPRAE-p Q9P206-3;S990-p VGVPPPASPSYPRAE 0.293047227537117 0.388528680540303 0.2 -0.086 10.0579642426395 5.45824622909603 0.2 -0.086 0.0986741912962031 0.284560999160547 1.99178265921673 -1.18715180733873 Q9P206 KIAA1522 Q9P206.3.S990.p_KIAA1522 Q9P206-3_S990s _1_1_990_990 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17061.17061.4 20.73 16.8 2.554 7 1 1 0 1018.2818 3990.1602 S990s TMT10 980 (R) KPSVGVPPPAsPSYPRAEPLTAPPTNGLPHTQDR (T) KPS(0.0)VGVPPPAS(0.99)PS(0.0)Y(0.0)PRAEPLT(0.0)APPT(0.0)NGLPHT(0.0)QDR K:TMT10,s:Phosphorylated S KIAA1522 108782.6 13 38 62.1 704.36 HUMAN 1 10.058 -5.4582 VGVSRGPSPVSLGNQ-p Q0JRZ9;S533-p VGVSRGPSPVSLGNQ 0.477468266229797 0.0139397692534253 0.094 0.414333333333333 5.90662223844682 25.7533373478459 0.094 0.414333333333333 0.256647936120455 0.00265868120374016 1.26791121588764 5.23035334128181 Q0JRZ9 FCHO2 Q0JRZ9.S533.p_FCHO2 Q0JRZ9_S533s _1_1_533_533 Q0JRZ9 Q0JRZ9|Q0JRZ9-3 F-BAR domain only protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37728.37728.3 22.43 22.43 2.922 6 1 1 0 1138.2625 3332.8142 S533s TMT10 531 (R) GPsPVSLGNQDTLPVAVALTESVNAYFK (G) GPS(0.99)PVS(0.0)LGNQDT(0.0)LPVAVALT(0.0)ES(0.0)VNAY(0.0)FK K:TMT10,s:Phosphorylated S FCHO2 89436.3 40 9 864.1 210.2 HUMAN 1 5.9066 25.7533 VGVVGLGTMGRGIVI-p Q08426;T307-p VGVVGLGTMGRGIVI 0.309869250687191 0.0173615564197841 0.151666666666667 0.432 9.5146278964911 24.2757961445455 0.151666666666667 0.432 0.111824563176469 0.00373611628972737 1.89749349514667 4.85683147057721 Q08426 EHHADH Q08426.T307.p_EHHADH Q08426_T307t _1_1_307_307 Q08426 Q08426|Q08426-2 Peroxisomal bifunctional enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16943.16943.3 12.93 12.93 12.935 5 1 1 0 737.7208 2131.1855 T307t TMT10 291 (K) TASARPVSSVGVVGLGtMGR (G) T(0.0)AS(0.0)ARPVS(0.0)S(0.0)VGVVGLGT(0.99)MGR t:Phosphorylated T EHHADH 80121 2 1 2380.1 85.83 HUMAN 1 9.5146 24.2758 VGYSARKSPLYDNCF-p Q9NVH0;S352-p VGYSARKSPLYDNCF 0.865557686443598 0.0294453959231857 0.0396666666666667 -0.277666666666667 1.21868848571739 20.7205174230892 0.0396666666666667 -0.277666666666667 0.755320290380658 0.00847126480573402 0.32786899187004 -4.03136892025847 Q9NVH0 EXD2 Q9NVH0.S352.p_EXD2 Q9NVH0_S352s _1_1_352_352 Q9NVH0 Q9NVH0|Q9NVH0-2 Exonuclease 3'-5' domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19885.19885.4 18.36 18.36 5.688 3 1 1 0 826.3843 3222.5535 S352s TMT10 351 (R) KsPLYDNCFLHAPDGQPLCTCDR (R) KS(0.99)PLY(0.0)DNCFLHAPDGQPLCT(0.0)CDR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S EXD2 71264.2 1 1 3121.1 60.26 HUMAN 1 1.2187 -20.7205 VGYYTIPSMDDLAKI-p P52948;S746-p VGYYTIPSMDDLAKI 0.730031357534783 0.25778285388357 -0.0533333333333333 0.125333333333333 2.59186131871497 7.75717237248322 -0.0533333333333333 0.125333333333333 0.550571679359546 0.167603376179742 -0.636221538621474 1.59251744165846 P52948 NUP98 P52948.S746.p_NUP98 P52948_S746s _1_1_746_746 P52948 P52948|P52948-5|P52948-2|P52948-6|P52948-3|P52948-4 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.28221.28221.3 14.23 14.23 5.346 4 1 1 0 704.3566 2031.0873 S746s TMT10 739 (K) VGYYTIPsMDDLAK (I) VGY(0.0)Y(0.0)T(0.0)IPS(0.99)MDDLAK K:TMT10,s:Phosphorylated S NUP98 198716.8 3 11 187.1 472.84 HUMAN 1 -2.5919 7.7572 VHAFGNCSDSDILEE-p Q7Z3D4;S28-p VHAFGNCSDSDILEE 0.55827821703547 0.970685983379029 0.0876666666666667 0.00533333333333334 4.6727234913216 0.183408995937824 0.0876666666666667 0.00533333333333335 0.340979014216321 0.958647845169076 1.04372649778054 0.0542907329777009 Q7Z3D4 LYSMD3 Q7Z3D4.S28.p_LYSMD3 Q7Z3D4_S28s _1_1_28_28 Q7Z3D4 Q7Z3D4|Q7Z3D4-3|Q7Z3D4-2 LysM and putative peptidoglycan-binding domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30581.30581.3 22.19 22.19 1.228 6 1 1 0 1387.9711 4081.9287 S28s TMT10 9 (R) SFPLPGVQSSGQVHAFGNCsDSDILEEDAEVYELR (S) S(0.0)FPLPGVQS(0.0)S(0.0)GQVHAFGNCS(0.99)DS(0.0)DILEEDAEVY(0.0)ELR C:Carbamidomethylation,s:Phosphorylated S LYSMD3 34822.3 2 1 3916.1 40.77 HUMAN 1 4.6727 0.1834 VHAPRRCSDGGAHGY-p P10071;S980-p VHAPRRCSDGGAHGY 0.430626932053893 0.0363667828484877 0.257 1.25466666666667 6.73703982931323 19.3716489437232 0.257 1.25466666666667 0.211980551189978 0.0115567336897521 1.41490027379592 3.74201625599528 P10071 GLI3 P10071.S980.p_GLI3 P10071_S980s _1_1_980_980 P10071 P10071 Transcriptional activator GLI3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3057.3057.4 9.98 9.98 9.98 2 1 1 0 440.2013 1677.8189 S980s TMT10 978 (R) RCsDGGAHGYGRR (H) RCS(0.99)DGGAHGY(0.0)GRR C:Carbamidomethylation,s:Phosphorylated S GLI3 171514.7 2 5 1965.1 105.02 HUMAN 1 6.737 19.3716 VHDAGNDSGHGGESN-p Q15075;S70-p VHDAGNDSGHGGESN 0.529513829882675 0.827950080485717 0.140333333333333 0.0276666666666667 5.10815594260102 1.1467993164838 0.140333333333333 0.0276666666666667 0.308449738037932 0.76792723141975 1.12384180909698 0.310275488224669 Q15075 EEA1 Q15075.S70.p_EEA1 Q15075_S70s _1_1_70_70 Q15075 Q15075 Early endosome antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7086.7086.5 18.15 7.75 5.386 3 1 1 0 615.3007 2992.5026 S70s TMT10 59 (K) HYEAVHDAGNDsGHGGESNLALKR (D) HY(0.0)EAVHDAGNDS(0.99)GHGGES(0.0)NLALKR K:TMT10,s:Phosphorylated S EEA1 163432.8 1 5 1129.1 174.59 HUMAN 1 5.1082 1.1468 VHDDDLLSSSEEECK-p P50402;S141-p VHDDDLLSSSEEECK 0.651183474642633 0.995186789721184 -0.0673333333333333 0.000666666666666686 3.49453593562948 0.0284458584688567 -0.0673333333333333 0.000666666666666691 0.447245939597615 0.993471502878039 -0.819186392083273 0.00856632356377945 P50402 EMD P50402.S141.p_EMD P50402_S141sS142s_2_2_141_142 P50402 P50402|Q5HY57 Emerin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18191.18191.4 12.21 12.21 1.415 6 2 2 0 1080.7223 4159.9304 S141s S142s TMT10 119 (R) QSVTSFPDADAFHHQVHDDDLLssSEEECKDR (E) QS(0.0)VT(0.0)S(0.0)FPDADAFHHQVHDDDLLS(0.99)S(0.99)S(0.0)EEECKDR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S EMD 29050.4 5 12 483.1 297.25 HUMAN 2 -3.4945 0.0284 VHFPVAGSYRWPNTG-p Q9C000;S1107-p VHFPVAGSYRWPNTG 0.665261908909664 0.316481538725525 0.205 0.293333333333333 3.30965447030112 6.60210578151354 0.205 0.293333333333333 0.466696509749835 0.218670109210739 0.78263447525482 1.39080531892182 Q9C000 NLRP1 Q9C000.S1107.p_NLRP1 Q9C000_Y1098yS1107s_2_2_1098_1107 Q9C000 Q9C000|Q9C000-4|Q9C000-2|Q9C000-3|Q9C000-5 NACHT, LRR and PYD domains-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.39006.39006.4 7.93 1.39 4.934 4 2 2 0 858.3959 3269.6815 N1096n Y1098y S1107s TMT10 1096 (K) nLyRVHFPVAGsYRWPNTGLCFVMR (E) N(0.99)LY(0.99)RVHFPVAGS(0.99)Y(0.0)RWPN(0.0)T(0.0)GLCFVMR C:Carbamidomethylation,n:Deamidated,y:Phosphorylated Y,s:Phosphorylated S NLRP1 167916.6 1 2 6342.1 12.25 HUMAN 1 3.3097 6.6021 VHFSKVRSLTLDTWE-p Q15057;S453-p VHFSKVRSLTLDTWE 0.939062815043773 0.712076549118651 -0.012 -0.0383333333333333 0.533723371559223 2.0287810882611 -0.012 -0.0383333333333333 0.884357091797215 0.626789757809671 -0.152447541748729 -0.515106302263328 Q15057 ACAP2 Q15057.S453.p_ACAP2 Q15057_S453s _1_1_453_453 Q15057 Q15057|A0A087X1H5 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31248.31248.3 10.75 9.31 1.365 3 1 1 0 618.6556 1773.9836 S453s Hydrogen 453 (R) sLTLDTWEPELLK (L) S(0.99)LT(0.0)LDT(0.0)WEPELLK K:TMT10-Lys-Only,s:Phosphorylated S ACAP2 88997 3 6 629.1 257.13 HUMAN 1 -0.5337 -2.0288 VHFVEPLSPTGVAGH-p Q5T5Y3-3;S1091-p VHFVEPLSPTGVAGH 0.365498843349433 0.00990041263691594 -0.221 -0.581666666666667 8.11291488104296 28.1902373228981 -0.221 -0.581666666666667 0.154421764956496 0.0015169674695714 -1.65474282696237 -5.8912417330145 Q5T5Y3 CAMSAP1 Q5T5Y3.3.S1091.p_CAMSAP1 Q5T5Y3-3_S1091s _1_1_1091_1091 Q5T5Y3-3 Q5T5Y3-3|Q5T5Y3-2 Isoform 3 of Calmodulin-regulated spectrin-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17552.17552.4 24.52 24.52 3.362 2 1 1 0 659.8679 2556.4815 S1091s TMT10 1080 (K) VKAPVHFVEPLsPTGVAGHR (K) VKAPVHFVEPLS(0.99)PT(0.0)GVAGHR K:TMT10,s:Phosphorylated S CAMSAP1 180710.7 7 13 220.1 428.42 HUMAN 1 -8.1129 -28.1902 VHGKPKASPSCSSPT-p Q8N5I9;S10-p VHGKPKASPSCSSPT 0.338386511533049 0.0833737463656301 0.17 -0.208666666666667 8.75319940765894 14.2841913175601 0.17 -0.208666666666667 0.133253940091285 0.0372890112860055 1.76564141680604 -2.74356092381759 Q8N5I9 C12orf45 Q8N5I9.S10.p_C12orf45 Q8N5I9_S10s _1_1_10_10 Q8N5I9 A0A087WT30|Q8N5I9|J3KN91 Uncharacterized protein C12orf45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8212.8212.4 9.19 9.19 2.916 5 1 1 0 634.8156 2456.279 S10s Acetyl 1 (-) MEVHGKPKAsPSCSSPTR (D) MEVHGKPKAS(0.99)PS(0.0)CS(0.0)S(0.0)PT(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S C12orf45 20180 1 2 1631.1 125.15 HUMAN 1 8.7532 -14.2842 VHGRSRSSPSTDHYK-p Q13796;S922-p VHGRSRSSPSTDHYK 0.541947066180421 0.0449639481054402 0.0853333333333333 0.250666666666667 4.90920356652573 18.0302362653381 0.0853333333333333 0.250666666666667 0.322908623528522 0.0157389723881501 1.08739261504527 3.46554394539966 Q13796 SHROOM2 Q13796.S922.p_SHROOM2 Q13796_S922s _1_1_922_922 Q13796 Q13796 Protein Shroom2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5069.5069.3 10.34 10.34 1.112 5 1 1 0 520.5891 1479.7844 S922s TMT10 921 (R) SsPSTDHYK (Q) S(0.0)S(0.99)PS(0.0)T(0.0)DHY(0.0)K K:TMT10,s:Phosphorylated S SHROOM2 177605.1 11 16 90.1 622.62 HUMAN 1 4.9092 18.0302 VHGSRRGSISSMSSV-p Q9H1K0;S230-p VHGSRRGSISSMSSV 0.823888768222287 0.0619338578682399 0.0366666666666667 0.247666666666667 1.62200883109552 16.0812258993921 0.0366666666666667 0.247666666666667 0.688333833570534 0.0246534333725796 0.423364922743988 3.08161090641597 Q9H1K0 RBSN Q9H1K0.S230.p_RBSN Q9H1K0_S230s _1_1_230_230 Q9H1K0 Q9H1K0 Rabenosyn-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17438.17438.4 15.69 15.69 2.624 7 1 1 0 770.136 2997.5675 S230s TMT10 228 (R) RGsISSMSSVSSVLDEKDDDRIR (C) RGS(0.99)IS(0.0)S(0.0)MS(0.0)S(0.0)VS(0.0)S(0.0)VLDEKDDDRIR K:TMT10,s:Phosphorylated S RBSN 89666.9 7 2 972.1 193.2 HUMAN 1 1.622 16.0812 VHGSSDDSKQSKVIP-p Q03188;S713-p VHGSSDDSKQSKVIP 0.123401035738524 0.0316625568645999 0.369666666666667 0.332 18.9015407191589 20.2503413746505 0.369666666666667 0.332 0.0128779260857801 0.00943986671846492 3.64707394615649 3.92914793382343 Q03188 CENPC Q03188.S713.p_CENPC Q03188_S709sS710sS713s_3_3_709_713 Q03188 Q03188 Centromere protein C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18173.18173.5 8.71 8.71 1.304 6 3 3 0 877.2016 4142.0754 S709s S710s S713s TMT10 689 (R) LNNNYLMSGKNDVDDEEVHGssDDsKQSK (V) LNNNY(0.0)LMS(0.0)GKNDVDDEEVHGS(0.99)S(0.99)DDS(0.99)KQS(0.0)K K:TMT10,s:Phosphorylated S CENPC 107459.5 1 29 209.1 442.77 HUMAN 1 18.9015 20.2503 VHISRIQSLELDKLG-p Q9ULH1-2;S496-p VHISRIQSLELDKLG 0.123085428560858 0.408647916729697 -0.275666666666667 0.0876666666666667 18.9455837658989 5.17237553352161 -0.275666666666667 0.0876666666666667 0.012747987337216 0.303922215650939 -3.6562260902342 1.13531879907017 Q9ULH1 ASAP1 Q9ULH1.2.S496.p_ASAP1 Q9ULH1-2_S496s _1_1_496_496 Q9ULH1-2 Q9ULH1-2|A0A0A0MRE5 Isoform 1 of Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.33542.33542.4 15.61 13.48 4.598 3 1 1 0 685.4034 2658.626 S496s TMT10 494 (R) IQsLELDKLGTSELLLAK (N) IQS(0.99)LELDKLGT(0.0)S(0.0)ELLLAK K:TMT10,s:Phosphorylated S ASAP1 126865.1 3 2 801.1 222.95 HUMAN 1 -18.9456 5.1724 VHLRKQHSYIEQGKK-p P49711;S461-p VHLRKQHSYIEQGKK 0.532600177749201 0.0092292356544658 0.103666666666667 -0.733 5.06367711617669 28.7557044637114 0.103666666666667 -0.733 0.31162499775445 0.00133177099986378 1.11571457949803 -6.05322265890691 P49711 CTCF P49711.S461.p_CTCF P49711_S461s _1_1_461_461 P49711 P49711|P49711-2 Transcriptional repressor CTCF HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5965.5975.3 13.07 13.07 5.208 2 1 1 0 662.3649 1905.1161 S461s TMT10 458 (R) KQHsYIEQGK (K) KQHS(0.99)Y(0.0)IEQGK K:TMT10,s:Phosphorylated S CTCF 84324.5 3 5 1956.1 105.21 HUMAN 1 5.0637 -28.7557 VHPATPISPGRASGM-p Q01196-8;S303-p VHPATPISPGRASGM 0.686263649021844 0.386499094135372 0.0786666666666667 0.106333333333333 3.06897158668904 5.48790738298513 0.0786666666666667 0.106333333333333 0.493290601791794 0.282624145118507 0.734386724101967 1.19250458727312 Q01196 RUNX1 Q01196.8.S303.p_RUNX1 Q01196-8_S303s _1_1_303_303 Q01196-8 Q01196-8|Q01196-2 Isoform AML-1G of Runt-related transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.28134.28134.4 18.95 18.95 1.128 11 1 1 0 1031.0034 4041.0344 S303s TMT10 272 (R) QIQPSPPWSYDQSYQYLGSIASPSVHPATPIsPGR (A) QIQPS(0.0)PPWS(0.0)Y(0.0)DQS(0.0)Y(0.0)QY(0.0)LGS(0.0)IAS(0.0)PS(0.0)VHPAT(0.0)PIS(0.99)PGR s:Phosphorylated S RUNX1 52102.5 1 4 1762.1 116.8 HUMAN 1 3.069 5.4879 VHQRRNGSKDSLMEE-p Q9HCS5;S649-p VHQRRNGSKDSLMEE 0.184722034825766 0.0446285575634521 0.232333333333333 0.274333333333333 14.4263561476814 18.0741265275392 0.232333333333333 0.274333333333333 0.0360881305553832 0.0155807136959424 2.7715400776198 3.47442341733273 Q9HCS5 EPB41L4A Q9HCS5.S649.p_EPB41L4A Q9HCS5_S649s _1_1_649_649 Q9HCS5 Q9HCS5 Band 4.1-like protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14588.14603.4 14.13 11.26 2.366 5 1 1 0 837.1945 3265.7868 S649s TMT10 647 (R) NGsKDSLMEEKPQTSTNNLAGK (H) NGS(0.99)KDS(0.0)LMEEKPQT(0.0)S(0.0)T(0.0)NNLAGK K:TMT10,s:Phosphorylated S EPB41L4A 79741.9 4 13 696.1 241.4 HUMAN 1 14.4264 18.0741 VHRARAVSPAPQSSS-p Q9P275-2;S742-p VHRARAVSPAPQSSS 0.275757791818365 0.867815320051507 -0.252333333333333 -0.0193333333333333 10.5836504432023 0.866461861148669 -0.252333333333333 -0.0193333333333333 0.0874248620465154 0.819131852099057 -2.083318519718 -0.240014759446019 Q9P275 USP36 Q9P275.2.S742.p_USP36 Q9P275-2_S742s _1_1_742_742 Q9P275-2 Q9P275-2|A0A075B784 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5034.5034.2 13.8 7.46 2.811 4 1 1 0 698.3448 1315.7167 S742s TMT10 740 (R) AVsPAPQSSSR (L) AVS(0.99)PAPQS(0.0)S(0.0)S(0.0)R s:Phosphorylated S USP36 124218 2 13 241.1 413.35 HUMAN 1 -10.5837 -0.8665 VHRQPPASPPRQAGW-p Q9BWN1;S93-p VHRQPPASPPRQAGW 0.574777890570195 0.12892169630849 0.082 -0.284666666666667 4.42292737731272 11.7278197220641 0.082 -0.284666666666667 0.3611663351282 0.0671766013331052 0.997157395071711 -2.28303951743952 Q9BWN1 PRR14 Q9BWN1.S93.p_PRR14 Q9BWN1_S93s _1_1_93_93 Q9BWN1 Q9BWN1 Proline-rich protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17753.17753.5 11.96 5.82 2.079 4 1 1 0 764.9813 3740.9063 S93s TMT10 89 (R) QPPAsPPRQAGWSSQARPPDPLCLCREPLSR (I) QPPAS(0.99)PPRQAGWS(0.0)S(0.0)QARPPDPLCLCREPLS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PRR14 64726.7 5 4 874.1 209.43 HUMAN 1 4.4229 -11.7278 VHRQRNLSGSTLYPV-p Q2KHR2;S1081-p VHRQRNLSGSTLYPV 0.53128844186677 0.0719128234737837 -0.0973333333333333 -0.217 5.08225620831042 15.1957017334269 -0.0973333333333334 -0.217 0.310294715364365 0.0302294208378509 -1.11911084675181 -2.91330486740114 Q2KHR2 RFX7 Q2KHR2.S1081.p_RFX7 Q2KHR2_S1081s _1_1_1081_1081 Q2KHR2 Q2KHR2|Q2KHR2-2|H0YLX2 DNA-binding protein RFX7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22563.22563.2 16.5 10.62 1.223 5 1 1 0 963.9992 1847.0224 S1081s TMT10 1079 (R) NLsGSTLYPVSNIPR (S) NLS(0.99)GS(0.0)T(0.0)LY(0.0)PVS(0.0)NIPR s:Phosphorylated S RFX7 147863 3 15 511.1 287.25 HUMAN 1 -5.0823 -15.1957 VHSKELLSAEENKRA-p Q9NWH9;S144-p VHSKELLSAEENKRA 0.379392937735762 0.0535352088942143 -0.201333333333333 0.242333333333333 7.77557423123072 16.9506387943842 -0.201333333333333 0.242333333333333 0.166894712171757 0.0201806950835987 -1.59620298861067 3.25045117638338 Q9NWH9 SLTM Q9NWH9.S144.p_SLTM Q9NWH9_S144s _1_1_144_144 Q9NWH9 Q9NWH9 SAFB-like transcription modulator HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16346.16346.2 12.28 12.28 99 1 1 1 0 785.9098 1490.8466 S144s TMT10 141 (K) ELLsAEENK (R) ELLS(1.0)AEENK K:TMT10,s:Phosphorylated S SLTM 117431.6 4 3 167.1 494.15 HUMAN 1 -7.7756 16.9506 VIDGSQVSSGPRGQG-p O60503;S600-p VIDGSQVSSGPRGQG 0.65433586681374 0.873904731939631 0.144333333333333 -0.0246666666666667 3.45225416328005 0.82404759801462 0.144333333333333 -0.0246666666666667 0.45162147379568 0.827170886147362 0.810864106960661 -0.229118908599404 O60503 ADCY9 O60503.S600.p_ADCY9 O60503_S600s _1_1_600_600 O60503 O60503 Adenylate cyclase type 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31937.31937.3 11.11 11.59 1.192 5 1 1 0 945.7712 2755.3228 S600s TMT10 581 (R) CSCAEALLSGFEVIDGSQVsSGPR (G) CS(0.0)CAEALLS(0.0)GFEVIDGS(0.0)QVS(0.99)S(0.0)GPR C:Carbamidomethylation,s:Phosphorylated S ADCY9 152923.1 1 6 658.1 252.1 HUMAN 1 3.4523 -0.824 VIDTKDGSQSKLGGE-p I6L8A6;S679-p VIDTKDGSQSKLGGE 0.255941518193295 0.00165031614303791 -0.353 -0.848 11.2452166298904 44.2938502302071 -0.353 -0.848 0.0750720606584777 3.72061709333109e-05 -2.19912617336516 -12.2421508182968 I6L8A6 NotFound I6L8A6.S679.p_NotFound I6L8A6_S679s _1_1_679_679 I6L8A6 Q99708-2|I6L8A6|Q99708-3 DNA endonuclease RBBP8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17998.17998.4 13.2 13.2 1.324 4 1 1 0 598.5665 2311.2782 S679s TMT10 668 (K) MDVTVIDTKDGsQSK (L) MDVT(0.0)VIDT(0.0)KDGS(0.99)QS(0.0)K K:TMT10,s:Phosphorylated S RBBP8 103921.2 2 12 258.1 398.22 HUMAN 1 -11.2452 -44.2939 VIEFRSYSDMKRALD-p Q13247;S157-p VIEFRSYSDMKRALD 0.160371181008916 0.8796819666475 0.337666666666667 0.0166666666666667 15.9076724373039 0.782085711161852 0.337666666666667 0.0166666666666667 0.0256585881732391 0.835201813937162 3.05048242789398 0.218265813408065 Q13247 SRSF6 Q13247.S157.p_SRSF6 Q13247_S157s _1_1_157_157 Q13247 Q13247|Q13247-3 Serine/arginine-rich splicing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7940.7940.3 8.82 3.12 2.375 3 1 1 0 475.5716 1344.7346 S157s TMT10 155 (R) SYsDMKR (A) S(0.0)Y(0.0)S(0.99)DMKR K:TMT10,s:Phosphorylated S SRSF6 39700.2 5 21 743.1 233.79 HUMAN 1 15.9077 0.7821 VIEGRQLSGNNIRPV-p Q9NZM1;S212-p VIEGRQLSGNNIRPV 0.327770976645339 0.916867202399833 -0.136 0.0106666666666667 9.06009268735738 0.530723317286283 -0.136 0.0106666666666667 0.124162580846615 0.884968206136724 -1.81876585795312 0.151620409704199 Q9NZM1 MYOF Q9NZM1.S212.p_MYOF Q9NZM1_S212s _1_1_212_212 Q9NZM1 Q9NZM1|Q9NZM1-3|Q9NZM1-6|Q9NZM1-2|Q9NZM1-5|Q9NZM1-7|Q9NZM1-8 Myoferlin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13619.13619.3 11.37 11.37 99 1 1 1 0 621.6917 1783.0954 S212s TMT10 210 (R) QLsGNNIRPVVK (V) QLS(1.0)GNNIRPVVK K:TMT10,s:Phosphorylated S MYOF 236244.8 2 3 829.1 216.58 HUMAN 1 -9.0601 0.5307 VIEIEDASPTKCPIT-p P46100;S1527-p VIEIEDASPTKCPIT 0.450633345488445 0.020442542969594 -0.165666666666667 -0.349333333333333 6.39078740791728 23.1272883035133 -0.165666666666667 -0.349333333333333 0.229573237717003 0.0048671100890194 -1.35389311382063 -4.57941725527433 P46100 ATRX P46100.S1527.p_ATRX P46100_S1527s _1_1_1527_1527 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.19989.19989.3 19.46 15.18 3.93 2 1 1 0 713.3882 2058.1847 S1527s TMT10 1517 (K) LREVIEIEDAsPTK (C) LREVIEIEDAS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S ATRX 285034.2 14 38 18.1 1035.36 HUMAN 1 -6.3908 -23.1273 VIEMEKISPEDRGEN-p Q68DQ2;S1849-p VIEMEKISPEDRGEN 0.602199350977412 0.0474444509351247 -0.0796666666666667 -0.243333333333333 4.06979524588474 17.7101237044424 -0.0796666666666667 -0.243333333333333 0.391760346753531 0.016942895396159 -0.930447723965175 -3.40110765926189 Q68DQ2 CRYBG3 Q68DQ2.S1849.p_CRYBG3 Q68DQ2_S1849s _1_1_1849_1849 Q68DQ2 Q68DQ2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.22193.22193.5 18.28 14.86 1.112 6 1 1 0 771.809 3775.0402 S1849s TMT10 1831 (K) ETIGATVSTPSVIEMEKIsPEDRGENIGK (H) ET(0.0)IGAT(0.0)VS(0.0)T(0.0)PS(0.0)VIEMEKIS(0.99)PEDRGENIGK K:TMT10,s:Phosphorylated S CRYBG3 333308.2 2 12 582.1 265.87 HUMAN 1 -4.0698 -17.7101 VIENSDVSPETESSE-p Q86UP2;S1313-p VIENSDVSPETESSE 0.627361376554036 0.0250575523077457 -0.099 0.34 3.76392315133235 21.784765282146 -0.099 0.34 0.420346741231403 0.00663015179877011 -0.871725479972002 4.26842651402845 Q86UP2 KTN1 Q86UP2.S1313.p_KTN1 Q86UP2_S1313s _1_1_1313_1313 Q86UP2 Q86UP2|Q86UP2-4|Q86UP2-3|Q86UP2-2|G3V4Y7|B7Z6P3 Kinectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14425.14425.3 19.69 19.69 1.252 7 1 1 0 935.4358 2724.3464 S1313s TMT10 1300 (K) AAGDTTVIENSDVsPETESSEK (E) AAGDT(0.0)T(0.0)VIENS(0.0)DVS(0.99)PET(0.0)ES(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S KTN1 156557.7 4 13 186.1 473.59 HUMAN 1 -3.7639 21.7848 VIEPLPVTPTRDVAT-p Q13153-2;T212-p VIEPLPVTPTRDVAT 0.414234482194179 0.973596765748086 -0.108666666666667 0.00366666666666667 7.06258022791358 0.163307011950627 -0.108666666666667 0.00366666666666667 0.196671747746155 0.963095378369084 -1.47196316593101 0.0484458826788501 Q13153 PAK1 Q13153.2.T212.p_PAK1 Q13153-2_T212t _1_1_212_212 Q13153-2 Q13153-2|B3KNX7|E9PM17 Isoform 2 of Serine/threonine-protein kinase PAK 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25123.25123.3 18.88 18.88 2 10 1 1 0 1299.3354 3816.0228 T212t TMT10 204 (R) SVIEPLPVtPTRDVATSPISPTENNTTPPDALTR (N) S(0.0)VIEPLPVT(0.99)PT(0.0)RDVAT(0.0)S(0.0)PIS(0.0)PT(0.0)ENNT(0.0)T(0.0)PPDALT(0.0)R t:Phosphorylated T PAK1 62087.3 5 7 272.2 393.22 HUMAN 1 -7.0626 0.1633 VIEPPAASCPSSPRI-p A0A0A0MRX4;S508-p VIEPPAASCPSSPRI 0.553286241397797 0.595188292282691 0.0933333333333333 -0.054 4.74529555638932 3.05181629859368 0.0933333333333333 -0.054 0.335328483104149 0.495243027837202 1.05716848999387 -0.730813669944812 A0A0A0MRX4 RGL3 A0A0A0MRX4.S508.p_RGL3 A0A0A0MRX4_S508s _1_1_508_508 A0A0A0MRX4 Q3MIN7|A0A0A0MRX4|Q3MIN7-2 Ral guanine nucleotide dissociation stimulator-like 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13394.13597.3 19.52 16.72 2.322 3 1 1 0 592.9572 1696.889 S508s TMT10 501 (R) VIEPPAAsCPSSPR (I) VIEPPAAS(0.99)CPS(0.0)S(0.0)PR C:Carbamidomethylation,s:Phosphorylated S RGL3 78574.5 5 2 1395.1 146.85 HUMAN 1 4.7453 -3.0518 VIEQCKNSRAVTIFI-p P48643;S380-p VIEQCKNSRAVTIFI 0.481005429235313 0.164524663416342 0.109666666666667 0.143666666666667 5.85251913693835 10.3055084190207 0.109666666666667 0.143666666666667 0.259865177089002 0.0932071348406787 1.25824619752414 2.03399028476661 P48643 CCT5 P48643.S380.p_CCT5 P48643_S380s _1_1_380_380 P48643 P48643|E9PCA1|B7ZAR1|E7ENZ3|P48643-2 T-complex protein 1 subunit epsilon HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16007.16007.3 8.13 8.13 99 1 1 1 0 639.3366 1836.0236 S380s TMT10 371 (K) MLVIEQCKNsR (A) MLVIEQCKNS(1.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CCT5 60126.4 1 9 1610.1 127.7 HUMAN 1 5.8525 10.3055 VIESNRISRESSVDC-p B2RTY4-5;S983-p VIESNRISRESSVDC 0.459299895698651 0.930980441078259 -0.107333333333333 -0.014 6.23083558756039 0.437328084779812 -0.107333333333333 -0.0139999999999999 0.238186115245431 0.904205598141483 -1.32558269138695 -0.126088414789882 B2RTY4 MYO9A B2RTY4.5.S983.p_MYO9A B2RTY4-5_S983s _1_1_983_983 B2RTY4-5 B2RTY4|B2RTY4-2|H3BRD5|B2RTY4-5|H3BMM1 Isoform 5 of Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6882.6882.3 8.46 6.8 1.184 3 1 1 0 490.5941 1389.8011 S983s TMT10 975 (K) SVIESNRIsR (E) S(0.0)VIES(0.0)NRIS(0.99)R s:Phosphorylated S MYO9A 267577.4 3 3 457.1 306.95 HUMAN 1 -6.2308 -0.4373 VIFIKPPSIERLRET-p Q5T2T1;S490-p VIFIKPPSIERLRET 0.834327857608735 0.198313479668043 -0.0393333333333334 0.185 1.51766743328318 9.24568815828134 -0.0393333333333333 0.185 0.70507165657709 0.118968280386818 -0.399122973848165 1.8502157901334 Q5T2T1 MPP7 Q5T2T1.S490.p_MPP7 Q5T2T1_S490s _1_1_490_490 Q5T2T1 Q5T2T1 MAGUK p55 subfamily member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30639.30639.5 17.37 17.37 7.407 3 1 1 0 589.7464 2864.7257 S490s TMT10 476 (R) TLEFKPYVIFIKPPsIER (L) T(0.0)LEFKPY(0.0)VIFIKPPS(0.99)IER K:TMT10,s:Phosphorylated S MPP7 65693.7 5 7 1298.1 156.56 HUMAN 1 -1.5177 9.2457 VIGASDQSPLQSPSN-p Q9HAU0-6;S1099-p VIGASDQSPLQSPSN 0.405906564884755 0.291860743863478 0.119 -0.111333333333333 7.2292363719284 7.05937777885201 0.119 -0.111333333333333 0.189267638220026 0.196816825234666 1.50108317643198 -1.47099316497599 Q9HAU0 PLEKHA5 Q9HAU0.6.S1099.p_PLEKHA5 Q9HAU0-6_S1099s _1_1_1099_1099 Q9HAU0-6 Q9HAU0-6|Q9HAU0-4|Q9HAU0-2|Q9HAU0-8|Q9HAU0-5|A0JP02 Isoform 6 of Pleckstrin homology domain-containing family A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23734.23734.3 15.7 13.26 1.404 4 1 1 0 997.8324 2911.5223 S1099s TMT10 1089 (K) GLNVIGASDQsPLQSPSNLRDNPFR (T) GLNVIGAS(0.0)DQS(0.99)PLQS(0.0)PS(0.0)NLRDNPFR s:Phosphorylated S PLEKHA5 147692.6 5 14 374.1 338.83 HUMAN 1 7.2292 -7.0594 VIHAPLPSPVDKVAA-p Q14BN4;S148-p VIHAPLPSPVDKVAA 0.0482466396076474 0.00643036349952778 -0.507 -0.553 29.1668345927402 31.5188440310722 -0.507 -0.553 0.00121148081411226 0.000704880663271721 -6.18258220721022 -6.89621399552159 Q14BN4 SLMAP Q14BN4.S148.p_SLMAP Q14BN4_S148s _1_1_148_148 Q14BN4 Q14BN4|Q14BN4-3|Q14BN4-2|Q14BN4-6|Q14BN4-7 Sarcolemmal membrane-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18931.18931.3 14.29 13.57 14.295 2 1 1 0 671.6991 1933.1159 S148s TMT10 139 (R) SDVIHAPLPsPVDK (V) S(0.0)DVIHAPLPS(0.99)PVDK K:TMT10,s:Phosphorylated S SLMAP 96052.4 2 1 2581.1 77.77 HUMAN 1 -29.1668 -31.5188 VIHSILNSPYAKLYN-p P23258;S80-p VIHSILNSPYAKLYN 0.96098037415965 0.0180427309790076 -0.00733333333333333 -0.356 0.33224345035143 24.0130626487375 -0.00733333333333334 -0.356 0.926351171262585 0.00396911548358375 -0.096824080768627 -4.79240477394107 P23258 TUBG1 P23258.S80.p_TUBG1 P23258_S80s _1_1_80_80 P23258 P23258|Q9NRH3|K7EKE5 Tubulin gamma-1 chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19672.19672.3 16.63 16.63 6.118 3 1 1 0 627.3555 1800.0784 S80s TMT10 73 (R) VIHSILNsPYAK (L) VIHS(0.0)ILNS(0.99)PY(0.0)AK K:TMT10,s:Phosphorylated S TUBG1 51511.3 2 1 4200.1 35.55 HUMAN 1 -0.3322 -24.0131 VIIPLVLSPDRDEDL-p Q96G25-2;S82-p VIIPLVLSPDRDEDL 0.46031060780097 0.177644210481483 0.099 0.142333333333333 6.21280820334755 9.87171173459742 0.099 0.142333333333333 0.239176870822683 0.102998008257856 1.32238638838329 1.95865015049417 Q96G25 MED8 Q96G25.2.S82.p_MED8 Q96G25-2_S82s _1_1_82_82 Q96G25-2 Q96G25-2 Isoform 2 of Mediator of RNA polymerase II transcription subunit 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.29986.29986.3 19.19 19.19 99 1 1 1 0 844.7728 2452.3431 S82s TMT10 73 (R) NQVIIPLVLsPDRDEDLMR (Q) NQVIIPLVLS(1.0)PDRDEDLMR s:Phosphorylated S MED8 32989.1 6 1 4398.1 32.04 HUMAN 1 6.2128 9.8717 VIIVSEPSEDEESQG-p Q9H4L7-2;S127-p VIIVSEPSEDEESQG 0.731825758136588 0.239465629874275 0.047 -0.134 2.57099007812828 8.17767250751474 0.047 -0.134 0.553223974203869 0.15213626474929 0.631842292900271 -1.6654284551535 Q9H4L7 SMARCAD1 Q9H4L7.2.S127.p_SMARCAD1 Q9H4L7-2_S127s _1_1_127_127 Q9H4L7-2 Q9H4L7-2|D6RAY8 Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24392.24392.3 19.34 15.4 2.822 5 1 1 0 938.1115 2732.3498 S127s TMT10 118 (K) DTVIIVSEPsEDEESQGLPTMAR (R) DT(0.0)VIIVS(0.0)EPS(0.99)EDEES(0.0)QGLPT(0.0)MAR s:Phosphorylated S SMARCAD1 118399.2 3 4 250.1 406.83 HUMAN 1 2.571 -8.1777 VIKDEALSDGDDLRD-p Q01831;S94-p VIKDEALSDGDDLRD 0.646466566739135 0.010624978962164 0.069 0.438 3.54738467668822 27.6782031393925 0.069 0.438 0.441836441356953 0.00170678841374809 0.829558702944382 5.74746240184618 Q01831 XPC Q01831.S94.p_XPC Q01831_S94s _1_1_94_94 Q01831 Q01831|Q01831-2|Q01831-3 DNA repair protein complementing XP-C cells HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23662.23662.4 20.41 13.33 7.082 2 1 1 0 779.6626 3035.6504 S94s TMT10 87 (K) VIKDEALsDGDDLRDFPSDLK (K) VIKDEALS(0.99)DGDDLRDFPS(0.0)DLK K:TMT10,s:Phosphorylated S XPC 106806.6 9 1 780.1 226.3 HUMAN 1 3.5474 27.6782 VIKLDHGSGEPYRRG-p O75157;S171-p VIKLDHGSGEPYRRG 0.770856722813785 0.043595433543787 0.0506666666666667 -0.259 2.16619755191496 18.2258303108123 0.0506666666666667 -0.259 0.607267787795879 0.0150458583535988 0.545301016346304 -3.50519889843901 O75157 TSC22D2 O75157.S171.p_TSC22D2 O75157_S171s _1_1_171_171 O75157 O75157|O75157-2 TSC22 domain family protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5309.5309.4 13.46 13.46 13.461 2 1 1 0 484.7556 1856.034 S171s Hydrogen 164 (R) VIKLDHGsGEPYRR (G) VIKLDHGS(0.99)GEPY(0.0)RR K:TMT10-Lys-Only,s:Phosphorylated S TSC22D2 79626.2 2 3 3050.1 62.1 HUMAN 1 2.1662 -18.2258 VIKNSAKSPLAAKSP-p O75665;S663-p VIKNSAKSPLAAKSP 0.2815267688613 0.000952253650599092 -0.176333333333333 -1.724 10.4101691430002 58.9031099031436 -0.176333333333333 -1.724 0.0909877835280342 1.28732739002413e-06 -2.05306976191584 -23.0178669291302 O75665 OFD1 O75665.S663.p_OFD1 O75665_S663s _1_1_663_663 O75665 O75665|O75665-3|A6NF31 Oral-facial-digital syndrome 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9897.9897.3 9.84 4.29 2.147 2 1 1 0 585.3441 1674.0517 S663s TMT10 659 (K) NSAKsPLAAK (S) NS(0.0)AKS(0.99)PLAAK K:TMT10,s:Phosphorylated S OFD1 117125.5 1 3 1369.1 149.33 HUMAN 1 -10.4102 -58.9031 VIKPEACSPQFGKTS-p Q8WXE1;S239-p VIKPEACSPQFGKTS 0.311874595590947 0.00240163636879992 -0.224666666666667 -0.848333333333333 9.46592359907925 40.1705337375919 -0.224666666666667 -0.848333333333333 0.113085686833368 9.61494105782815e-05 -1.88905284025759 -10.2083343350766 Q8WXE1 ATRIP Q8WXE1.S239.p_ATRIP Q8WXE1_S239s _1_1_239_239 Q8WXE1 Q8WXE1|Q8WXE1-2|Q8WXE1-3|Q8WXE1-5|A0A0U1RQW3 ATR-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17167.17167.4 16.04 16.04 16.039 2 1 1 0 746.4241 2902.6994 S239s TMT10 227 (R) KNPSVVIKPEACsPQFGK (T) KNPS(0.0)VVIKPEACS(0.99)PQFGK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ATRIP 87148.5 6 2 2662.1 74.67 HUMAN 1 -9.4659 -40.1705 VINEVINSPKGKKRK-p Q5FWF5;S200-p VINEVINSPKGKKRK 0.182735755275441 0.00176472384256938 -0.293333333333333 -0.881333333333333 14.5103319149451 43.5581910704845 -0.293333333333333 -0.881333333333333 0.0353970287431334 4.40738402262352e-05 -2.78710802719467 -11.8536720733566 Q5FWF5 ESCO1 Q5FWF5.S200.p_ESCO1 Q5FWF5_S200s _1_1_200_200 Q5FWF5 Q5FWF5|Q5FWF5-2 N-acetyltransferase ESCO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21270.21270.4 21.23 17.1 21.234 3 1 1 0 725.1328 2817.5449 S200s TMT10 184 (K) SDSKEDENLVINEVINsPK (G) S(0.0)DS(0.0)KEDENLVINEVINS(0.99)PK K:TMT10,s:Phosphorylated S ESCO1 96179.3 1 2 1971.1 104.85 HUMAN 1 -14.5103 -43.5582 VINFDLPSDIEEYVH-p A0A0D9SF53;S520-p VINFDLPSDIEEYVH 0.97076436181379 0.0207353276371136 0.00866666666666666 -0.334333333333333 0.254082601913242 23.0278640091535 0.00866666666666668 -0.334333333333333 0.943173825246033 0.00497981947253757 0.0746518473534783 -4.55590696918034 A0A0D9SF53 NotFound A0A0D9SF53.S520.p_NotFound A0A0D9SF53_S520s _1_1_520_520 A0A0D9SF53 A0A0D9SF53|O00571|O15523|O15523-2|A0A0D9SG12|O00571-2|A0A0D9SFB3 ATP-dependent RNA helicase DDX3X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27728.27728.4 22.57 22.57 9.542 2 1 1 0 598.7936 2312.1873 S520s TMT10 512 (K) HVINFDLPsDIEEYVHR (I) HVINFDLPS(0.99)DIEEY(0.0)VHR s:Phosphorylated S DDX3X 82160.2 2 11 1042.1 184.93 HUMAN 1 0.2541 -23.0279 VINGNPITIFQERDP-p P04406;T75-p VINGNPITIFQERDP 0.202846697385928 0.272909183548136 -0.418 0.162666666666667 13.4316185605482 7.4296548446709 -0.418 0.162666666666667 0.0453772469878401 0.180731775679449 -2.58914095110986 1.53558130708691 P04406 GAPDH P04406.T75.p_GAPDH P04406_T75t_1_1_75_75 P04406 P04406|P04406-2 Glyceraldehyde-3-phosphate dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27436.27436.4 10.27 10.27 1.109 2 1 1 0 763.6901 2969.7755 N70n N72n T75t TMT10 67 (K) LVInGnPItIFQERDPSKIK (W) LVIN(1.0)GN(1.0)PIT(0.99)IFQERDPS(0.0)KIK K:TMT10,n:Deamidated,t:Phosphorylated T GAPDH 36223.7 19 1 1327.1 153.64 HUMAN 1 -13.4316 7.4297 VIPEGPRSPSPLMVV-p Q9C086;S97-p VIPEGPRSPSPLMVV 0.276181983641786 0.221067801202134 0.166333333333333 0.127333333333333 10.5702900155527 8.63053085604194 0.166333333333333 0.127333333333333 0.0876942258256863 0.137071420787823 2.08098737160041 1.74380699916534 Q9C086 INO80B Q9C086.S97.p_INO80B Q9C086_S97sS99s_2_2_97_99 Q9C086 J3KQ70|Q9C086|F8WCL7|B8ZZ93 INO80 complex subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34038.34445.4 28.51 28.51 3.514 6 2 2 0 1129.5339 4355.1777 S97s S99s TMT10 84 (K) SVPTFTVIPEGPRsPsPLMVVDNEEEPMEGVPLEQYR (A) S(0.0)VPT(0.0)FT(0.0)VIPEGPRS(0.99)PS(0.99)PLMVVDNEEEPMEGVPLEQY(0.0)R s:Phosphorylated S INO80B 39035.8 33 8 1391.1 147.13 HUMAN 1 10.5703 8.6305 VIPKKTGSPEIKLKI-p Q9BZ95;S150-p VIPKKTGSPEIKLKI 0.676823734876953 0.00595004777315755 0.058 -0.62 3.17477358807328 32.1477380384007 0.058 -0.62 0.481418351260143 0.000609854448631158 0.755692635379459 -7.10081414479432 Q9BZ95 WHSC1L1 Q9BZ95.S150.p_WHSC1L1 Q9BZ95_S150s _1_1_150_150 Q9BZ95 Q9BZ95|Q9BZ95-5|Q9BZ95-2|Q9BZ95-4|Q9BZ95-3 Histone-lysine N-methyltransferase NSD3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8893.9099.3 9.12 4.99 1.117 2 1 1 0 542.9856 1546.9772 S150s TMT10 147 (K) KTGsPEIK (L) KT(0.0)GS(0.99)PEIK K:TMT10,s:Phosphorylated S NSD3 165432.8 6 1 1351.1 150.85 HUMAN 1 3.1748 -32.1477 VIPQHQLSISPDIRV-p O60503;S1257-p VIPQHQLSISPDIRV 0.128023476673973 0.739323618181647 -0.312 0.0336666666666667 18.4829224723238 1.80960016595863 -0.312 0.0336666666666666 0.0141810292487565 0.659234585008114 -3.5606673964897 0.466158937424913 O60503 ADCY9 O60503.S1257.p_ADCY9 O60503_S1257s _1_1_1257_1257 O60503 O60503 Adenylate cyclase type 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19304.19304.3 15.71 15.71 2.722 2 1 1 0 638.013 1832.0591 S1257s TMT10 1250 (R) VIPQHQLsISPDIR (V) VIPQHQLS(0.99)IS(0.0)PDIR s:Phosphorylated S ADCY9 152923.1 3 12 658.1 252.1 HUMAN 1 -18.4829 1.8096 VIPTWNISPIKKANE-p Q3T8J9-3;S346-p VIPTWNISPIKKANE 0.177952626351024 0.00112568182952083 -0.227666666666667 -1.23033333333333 14.8390841355727 49.0601107926965 -0.227666666666667 -1.23033333333333 0.0328164490974722 1.24162063225267e-05 -2.84832540040697 -15.0662923055314 Q3T8J9 GON4L Q3T8J9.3.S346.p_GON4L Q3T8J9-3_S346s _1_1_346_346 Q3T8J9-3 Q3T8J9|Q3T8J9-3|A0A087WUE6|Q3T8J9-2|A4PB68 Isoform 3 of GON-4-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.28227.28252.3 18.4 18.4 2.273 2 1 1 0 773.797 2239.4145 S346s TMT10 337 (K) GVVIPTWNIsPIKK (A) GVVIPT(0.0)WNIS(0.99)PIKK K:TMT10,s:Phosphorylated S GON4L 250541.8 9 5 291.1 381.52 HUMAN 1 -14.8391 -49.0601 VIQAAAVSPKFVRLK-p Q9Y6D5;S227-p VIQAAAVSPKFVRLK 0.269424134699647 0.151647491650316 -0.24 0.202333333333333 10.7974205311911 10.7706227213794 -0.24 0.202333333333333 0.0832257939478338 0.0837409200011669 -2.12065572240449 2.11504044224346 Q9Y6D5 ARFGEF2 Q9Y6D5.S227.p_ARFGEF2 Q9Y6D5_S227s _1_1_227_227 Q9Y6D5 Q9Y6D5 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17640.17640.3 21.69 21.69 11.924 3 1 1 0 905.1915 2633.5957 S227s TMT10 211 (K) PIQSKPQSPVIQAAAVsPK (F) PIQS(0.0)KPQS(0.0)PVIQAAAVS(0.99)PK K:TMT10,s:Phosphorylated S ARFGEF2 204545.1 17 1 205.1 448.88 HUMAN 1 -10.7974 10.7706 VIQPMGMSPRGHLTS-p Q9NPQ8-3;S508-p VIQPMGMSPRGHLTS 0.51748982283609 0.0114203787919715 0.0913333333333333 -0.395666666666667 5.28353010100609 27.1850515598409 0.0913333333333333 -0.395666666666667 0.296242244761353 0.00191203062466609 1.15577191568823 -5.61151848839413 Q9NPQ8 RIC8A Q9NPQ8.3.S508.p_RIC8A Q9NPQ8-3_S508s _1_1_508_508 Q9NPQ8-3 Q9NPQ8|Q9NPQ8-4|Q9NPQ8-2|Q9NPQ8-3 Isoform 3 of Synembryn-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17262.17262.2 10.46 6.71 99 1 1 1 0 712.8554 1344.7329 S508s TMT10 501 (R) VIQPMGMsPR (G) VIQPMGMS(1.0)PR s:Phosphorylated S RIC8A 60884.7 5 3 3369.1 52.69 HUMAN 1 5.2835 -27.1851 VIQSNTPTPPPSQPL-p B5MBZ0;T910-p VIQSNTPTPPPSQPL 0.13430679397205 0.45584709342569 0.263 -0.072 17.8865792112755 4.54909137757334 0.263 -0.072 0.0162682964916081 0.350825265251208 3.43934741314636 -1.02054712727646 B5MBZ0 EML4 B5MBZ0.T910.p_EML4 B5MBZ0_T908tT910t_2_2_908_910 B5MBZ0 B5MBZ0|Q9HC35|Q9HC35-2 Echinoderm microtubule-associated protein-like 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19124.19124.3 26.04 21.61 1.149 10 2 2 0 1256.9081 3608.7765 T908t T910t TMT10 895 (K) APVSSTESVIQSNtPtPPPSQPLNETAEEESR (I) APVS(0.0)S(0.0)T(0.0)ES(0.0)VIQS(0.0)NT(0.99)PT(0.99)PPPS(0.0)QPLNET(0.0)AEEES(0.0)R t:Phosphorylated T EML4 111259.7 3 15 586.1 265.11 HUMAN 1 17.8866 -4.5491 VIREIEMSVDDDDIN-p Q9NQW6;S553-p VIREIEMSVDDDDIN 0.952442048084725 0.792459566282823 -0.0116666666666667 -0.0526666666666666 0.418980298917241 1.40739757440813 -0.0116666666666667 -0.0526666666666667 0.908033706789934 0.723203039203297 -0.121031112053899 -0.373124253243156 Q9NQW6 ANLN Q9NQW6.S553.p_ANLN Q9NQW6_S553s _1_1_553_553 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18762.18762.3 11.97 11.97 5.099 3 1 1 0 745.6784 2155.0477 S553s TMT10 549 (R) EIEMsVDDDDINSSK (V) EIEMS(0.99)VDDDDINS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ANLN 125566 2 37 68.1 675.08 HUMAN 1 -0.419 -1.4074 VIRSADVSPTTEGVK-p Q9C040-2;S455-p VIRSADVSPTTEGVK 0.159987408261037 0.446537052241704 0.309333333333333 -0.107 15.9334406657638 4.66556318541264 0.309333333333333 -0.107 0.0255067974490918 0.341541657295363 3.05542060067694 -1.04219933306439 Q9C040 TRIM2 Q9C040.2.S455.p_TRIM2 Q9C040-2_S455s _1_1_455_455 Q9C040-2 Q9C040-2|A0A0J9YX34 Isoform 2 of Tripartite motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11155.11155.3 11.08 11.08 1.585 4 1 1 0 576.9655 1648.9158 S455s TMT10 451 (R) SADVsPTTEGVK (R) S(0.0)ADVS(0.99)PT(0.0)T(0.0)EGVK K:TMT10,s:Phosphorylated S TRIM2 85627.1 2 2 2827.1 69.05 HUMAN 1 15.9334 -4.6656 VISCPPLTPDWGVQD-p P22234-2;T361-p VISCPPLTPDWGVQD 0.536977434631499 0.0889735012140798 -0.130333333333333 0.200666666666667 4.99660303467872 13.9065281238675 -0.130333333333333 0.200666666666667 0.316475209865162 0.0406768381669535 -1.10343555330408 2.67418167920285 P22234 PAICS P22234.2.T361.p_PAICS P22234-2_T361t _1_1_361_361 P22234-2 P22234-2|D6RF62 Isoform 2 of Multifunctional protein ADE2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.36647.36647.4 28.22 28.22 2.027 8 1 1 0 1042.5017 4087.0255 T361t TMT10 339 (R) SNGLGPVMSGNTAYPVISCPPLtPDWGVQDVWSSLR (L) S(0.0)NGLGPVMS(0.0)GNT(0.0)AY(0.0)PVIS(0.0)CPPLT(0.99)PDWGVQDVWS(0.0)S(0.0)LR C:Carbamidomethylation,t:Phosphorylated T PAICS 48699 3 7 991.1 191.33 HUMAN 1 -4.9966 13.9065 VISHDRDSPPPPPPP-p Q69YN4;S138-p VISHDRDSPPPPPPP 0.787143020155622 0.338643066759598 -0.0426666666666667 0.096 2.00756982308183 6.2304785674563 -0.0426666666666667 0.096 0.629858533521663 0.238205696596477 -0.510477779918868 1.32519271516882 Q69YN4 KIAA1429 Q69YN4.S138.p_KIAA1429 Q69YN4_S138s _1_1_138_138 Q69YN4 Q69YN4|Q69YN4-3|Q69YN4-2|Q69YN4-4 Protein virilizer homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.15049.15049.3 20.74 19.42 2.16 3 1 1 0 1104.9213 3232.7883 S138s TMT10 131 (R) VISHDRDsPPPPPPPPPPPQPQPSLK (R) VIS(0.0)HDRDS(0.99)PPPPPPPPPPPQPQPS(0.0)LK K:TMT10,s:Phosphorylated S VIRMA 203675.9 10 2 1178.1 169.26 HUMAN 1 -2.0076 6.2305 VISPPAPSPRKTPVA-p P46013;S584-p VISPPAPSPRKTPVA 0.933962975598258 0.00298089814036961 0.0176666666666667 -1.00866666666667 0.584321803295082 37.9953116782395 0.0176666666666667 -1.00866666666667 0.874113483986186 0.000158660504966834 0.166092820352036 -9.26523223558199 P46013 MKI67 P46013.S584.p_MKI67 P46013_S584s _1_1_584_584 P46013 P46013|P46013-2 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18251.18657.3 22.26 22.26 4.875 3 1 1 0 576.9797 1648.9584 S584s TMT10 573 (K) AQSLVISPPAPsPR (K) AQS(0.0)LVIS(0.0)PPAPS(0.99)PR s:Phosphorylated S MKI67 360912.4 5 13 5.1 1918.46 HUMAN 1 0.5843 -37.9953 VISPPQPSPQKQIRD-p Q08AD1;S936-p VISPPQPSPQKQIRD 0.769423387089442 0.00298196053006193 0.049 -0.699666666666667 2.18045707857427 37.9665525978123 0.049 -0.699666666666667 0.605277168260782 0.000159714644895322 0.548404791116155 -9.25330910927385 Q08AD1 CAMSAP2 Q08AD1.S936.p_CAMSAP2 Q08AD1_S936s _1_1_936_936 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20361.20361.3 13.63 13.63 3.023 3 1 1 0 792.0801 2294.2545 S936s TMT10 924 (R) EQQSWVISPPQPsPQK (Q) EQQS(0.0)WVIS(0.0)PPQPS(0.99)PQK K:TMT10,s:Phosphorylated S CAMSAP2 169284 2 18 28.2 931.95 HUMAN 1 2.1805 -37.9666 VISRPPPSVSPPKCI-p Q8NHM5;S1029-p VISRPPPSVSPPKCI 0.147090784109906 0.823933222349353 -0.343666666666667 -0.0273333333333333 16.8970790001958 1.17858583497289 -0.343666666666667 -0.0273333333333334 0.0204311164902346 0.762327201289858 -3.24239101211677 -0.318061657546379 Q8NHM5 KDM2B Q8NHM5.S1029.p_KDM2B Q8NHM5_S1029sS1031s_2_2_1029_1031 Q8NHM5 Q8NHM5|Q8NHM5-3|Q8NHM5-2|Q8NHM5-4|A0A0C4DGG3 Lysine-specific demethylase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15119.15119.3 8.77 6.3 8.379 3 2 2 0 660.3553 1819.1206 S1029s S1031s TMT10 1022 (R) VISRPPPsVsPPK (C) VIS(0.0)RPPPS(0.99)VS(0.99)PPK K:TMT10,s:Phosphorylated S KDM2B 155065.3 1 14 800.1 223.19 HUMAN 1 -16.8971 -1.1786 VITVEKSSPATSLFV-p Q9BXK5;S371-p VITVEKSSPATSLFV 0.666639852843335 0.0139668836897806 -0.130333333333333 0.433333333333333 3.2907771031895 25.7394855702771 -0.130333333333333 0.433333333333333 0.468729502704641 0.00266717457749686 -0.778878181769971 5.22676044099684 Q9BXK5 BCL2L13 Q9BXK5.S371.p_BCL2L13 Q9BXK5_S371s _1_1_371_371 Q9BXK5 A0A087WX97|Q9BXK5|A0A087WTL4|Q9BXK5-4 Bcl-2-like protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31254.31254.2 14.98 14.98 1.15 4 1 1 0 1209.6101 2338.243 S371s TMT10 370 (K) SsPATSLFVELDEEEVK (A) S(0.0)S(0.99)PAT(0.0)S(0.0)LFVELDEEEVK K:TMT10,s:Phosphorylated S BCL2L13 52836.3 8 4 810.1 221.13 HUMAN 1 -3.2908 25.7395 VKAEKRKSPPKEYID-p Q9H0E3-3;S910-p VKAEKRKSPPKEYID 0.310256366939808 0.509488207597748 0.141333333333333 0.0686666666666667 9.5001599677348 3.92613671951807 0.141333333333333 0.0686666666666667 0.112197712671148 0.404935943597395 1.89498598898663 0.902833147454352 Q9H0E3 SAP130 Q9H0E3.3.S910.p_SAP130 Q9H0E3-3_S910s _1_1_910_910 Q9H0E3-3 Q9H0E3-3|H7BXF5|Q9H0E3-2 Isoform 3 of Histone deacetylase complex subunit SAP130 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.9221.9221.5 15.2 15.2 5.968 2 1 1 0 514.8849 2490.4283 S910s TMT10 908 (K) RKsPPKEYIDEEGVR (Y) RKS(0.99)PPKEY(0.0)IDEEGVR K:TMT10,s:Phosphorylated S SAP130 114136.2 9 7 1227.1 164.39 HUMAN 1 9.5002 3.9261 VKAGQEPSPKPGTDV-p Q4VC44;S21-p VKAGQEPSPKPGTDV 0.796675603176269 0.687715112562794 -0.0546666666666667 -0.04 1.90454839885753 2.22639448028744 -0.0546666666666667 -0.04 0.644978384462279 0.598908603600659 -0.487558279790886 -0.558307220652704 Q4VC44 FLYWCH1 Q4VC44.S21.p_FLYWCH1 Q4VC44_S21s _1_1_21_21 Q4VC44 Q4VC44-3|Q4VC44-2 FLYWCH-type zinc finger-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14243.14243.3 13.99 13.99 3.477 2 1 1 0 809.4338 2346.3182 S21s TMT10 16 (K) AGQEPsPKPGTDVIPAAPR (K) AGQEPS(0.99)PKPGT(0.0)DVIPAAPR K:TMT10,s:Phosphorylated S FLYWCH1 81305.1 2 1 2534.1 79.6 HUMAN 1 -1.9045 -2.2264 VKAIPADSPTDQEPK-p Q9Y5Y0;S536-p VKAIPADSPTDQEPK 0.139661670983594 0.223923519859577 -0.262333333333333 -0.122666666666667 17.4928220261247 8.55909840419796 -0.262333333333333 -0.122666666666667 0.0178122096190378 0.139344605246746 -3.3603396431288 -1.73144955804504 Q9Y5Y0 FLVCR1 Q9Y5Y0.S536.p_FLVCR1 Q9Y5Y0_S536s _1_1_536_536 Q9Y5Y0 Q9Y5Y0|Q9Y5Y0-2 Feline leukemia virus subgroup C receptor-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12503.12503.2 14.04 11.23 1.24 2 1 1 0 953.9815 1826.99 S536s TMT10 531 (K) AIPADsPTDQEPK (T) AIPADS(0.99)PT(0.0)DQEPK K:TMT10,s:Phosphorylated S FLVCR1 60318.2 1 2 4184.1 35.77 HUMAN 1 -17.4928 -8.5591 VKAKRKGSVSVCSKE-p P38432;S235-p VKAKRKGSVSVCSKE 0.194933326368064 0.933170278887016 -0.205 -0.0176666666666666 13.8526334769119 0.423949275614259 -0.205 -0.0176666666666666 0.0411847706959092 0.90699537489726 -2.6659014262817 -0.122394310805712 P38432 COIL P38432.S235.p_COIL P38432_S235s _1_1_235_235 P38432 P38432 Coilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8436.8436.3 9.36 9.36 1.101 3 1 1 0 573.6557 1638.9816 S235s TMT10 233 (R) KGsVSVCSK (E) KGS(0.99)VS(0.0)VCS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S COIL 63291.8 1 8 395.1 330.42 HUMAN 1 -13.8526 -0.4239 VKANYFPSPGITLHE-p A2AJT9;S489-p VKANYFPSPGITLHE 0.281722640941791 0.163004222899545 0.193666666666667 -0.148 10.3998856740484 10.3573302373235 0.193666666666667 -0.148 0.0912034847922408 0.0921015578803583 2.05127805830279 -2.04300543588526 A2AJT9 CXorf23 A2AJT9.S489.p_CXorf23 A2AJT9_S489s _1_1_489_489 A2AJT9 A2AJT9|A2AJT9-2 BCLAF1 and THRAP3 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19366.19366.3 15.83 15.83 5.022 3 1 1 0 637.6518 1830.97 S489s TMT10 484 (K) ANYFPsPGITLHER (F) ANY(0.0)FPS(0.99)PGIT(0.0)LHER s:Phosphorylated S BCLAF3 84269.3 1 10 1202.1 166.95 HUMAN 1 10.3999 -10.3573 VKAPVSRSPPREQVI-p Q5VUA4;S2243-p VKAPVSRSPPREQVI 0.529066849032968 0.059810921452491 0.101666666666667 0.253 5.11647950244468 16.2967384529396 0.101666666666667 0.253 0.307859138518518 0.0234598998996932 1.12536136386993 3.12311881949968 Q5VUA4 ZNF318 Q5VUA4.S2243.p_ZNF318 Q5VUA4_S2243s _1_1_2243_2243 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4275.4275.3 11.39 2.45 2.464 2 1 1 0 425.8973 1195.7109 S2243s TMT10 2238 (K) APVSRsPPR (E) APVS(0.0)RS(0.99)PPR s:Phosphorylated S ZNF318 252762.4 2 38 37.1 870.88 HUMAN 1 5.1165 16.2967 VKASGYQSSQKKSCV-p P51858;S102-p VKASGYQSSQKKSCV 0.0226893244468939 0.148298128846236 0.728333333333333 0.326666666666667 38.0520506479296 10.9139846957686 0.728333333333333 0.326666666666667 0.000156601145757108 0.0810217334125503 9.30894285446827 2.14009074253923 P51858 HDGF P51858.S102.p_HDGF P51858_S102s _1_1_102_102 P51858 P51858-3|P51858-2 Hepatoma-derived growth factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5885.5885.3 11.65 11.65 1.164 4 1 1 0 617.6719 1771.0317 S102s TMT10 97 (K) ASGYQsSQKK (S) AS(0.0)GY(0.0)QS(0.99)S(0.0)QKK K:TMT10,s:Phosphorylated S HDGF 26901.9 3 3 213.1 437.7 HUMAN 1 38.0521 10.914 VKASPVPSDPEKPGT-p O14686-3;S1861-p VKASPVPSDPEKPGT 0.41147791714667 0.679078585656714 0.121333333333333 0.127666666666667 7.11404217572203 2.29714884701816 0.121333333333333 0.127666666666667 0.194355028911942 0.589230359453784 1.48096130041435 0.573576200090221 O14686 KMT2D O14686.3.S1861.p_KMT2D O14686-3_S1861sT1868t_2_2_1861_1868 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26950.26950.5 11.18 6.76 1.617 8 2 2 0 998.5035 4828.5406 S1861s T1868t TMT10 1856 (K) ASPVPsDPEKPGtPGEGMLSSDLDRISTEELPKMESK (D) AS(0.0)PVPS(0.99)DPEKPGT(0.99)PGEGMLS(0.0)S(0.0)DLDRIS(0.0)T(0.0)EELPKMES(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T KMT2D 600227.3 1 52 17.1 1042.08 HUMAN 1 7.114 2.2971 VKASQEPSPKPGTEV-p I3L1Y9;S21-p VKASQEPSPKPGTEV 0.571027747853575 0.0363415868209319 -0.0816666666666667 -0.270333333333333 4.47925647489387 19.376889983757 -0.0816666666666667 -0.270333333333333 0.356512164147597 0.0115427955040717 -1.00770104279301 -3.74311780447134 I3L1Y9 NotFound I3L1Y9.S21.p_NotFound I3L1Y9_S21s _1_1_21_21 I3L1Y9 I3L1Y9|Q96CP2 FLYWCH family member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13637.13637.3 15.41 15.41 1.874 3 1 1 0 824.1079 2390.3444 S21s TMT10 16 (K) ASQEPsPKPGTEVIPAAPR (K) AS(0.0)QEPS(0.99)PKPGT(0.0)EVIPAAPR K:TMT10,s:Phosphorylated S FLYWCH2 15660.9 4 1 5156.1 22.33 HUMAN 1 -4.4793 -19.3769 VKASYRASEQKLRVE-p Q70J99-3;S923-p VKASYRASEQKLRVE 0.34689437832203 0.00464025974917448 -0.182666666666667 -0.604 8.544404106118 34.1359792166141 -0.182666666666667 -0.604 0.139816874438792 0.000385835406336119 -1.72949515598068 -7.78149132706825 Q70J99 UNC13D Q70J99.3.S923.p_UNC13D Q70J99-3_S923s _1_1_923_923 Q70J99-3 Q70J99-3 Isoform 3 of Protein unc-13 homolog D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.4864.4864.3 10.07 10.07 10.069 3 1 1 0 526.608 1497.8426 S923s TMT10 918 (K) ASYRAsEQK (L) AS(0.0)Y(0.0)RAS(0.99)EQK K:TMT10,s:Phosphorylated S UNC13D 129958.1 1 3 2704.1 73.39 HUMAN 1 -8.5444 -34.136 VKAVEARSPGLQKEA-p Q3KQU3;S753-p VKAVEARSPGLQKEA 0.0866557243462627 0.00238856624082869 -0.442666666666667 -0.933666666666667 22.7339976612933 40.2647473822582 -0.442666666666667 -0.933666666666667 0.00532844188981506 9.4086055584279e-05 -4.49182465483359 -10.2510877940923 Q3KQU3 MAP7D1 Q3KQU3.S753.p_MAP7D1 Q3KQU3_S753s _1_1_753_753 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2|Q3KQU3-3 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8753.8753.3 10.73 5.79 99 1 1 1 0 565.3186 1613.9739 S753s TMT10 748 (K) AVEARsPGLQK (E) AVEARS(1.0)PGLQK K:TMT10,s:Phosphorylated S MAP7D1 93160.6 3 20 160.1 495.56 HUMAN 1 -22.734 -40.2647 VKDEEEDS_______-p Q96C92;S435-p VKDEEEDS_______ 0.272868302810421 0.120448210272887 0.318 0.267 10.6855461076965 12.1194930239318 0.318 0.267 0.085397545671665 0.0613833657194409 2.10110652392812 2.35235988351501 Q96C92 SDCCAG3 Q96C92.S435.p_SDCCAG3 Q96C92_S435s _1_1_435_435 Q96C92 Q96C92|Q96C92-2|Q96C92-3|Q96C92-4 Serologically defined colon cancer antigen 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13778.13778.3 11.42 11.42 9.287 3 1 1 0 763.7025 2209.1236 S435s TMT10 421 (K) SIDRISEVKDEEEDs (-) S(0.0)IDRIS(0.0)EVKDEEEDS(0.99) K:TMT10,s:Phosphorylated S SDCCAG3 48302.7 1 6 1849.1 111.15 HUMAN 1 10.6855 12.1195 VKDELTESPKYIQKQ-p Q8NC51;S234-p VKDELTESPKYIQKQ 0.019376665224519 0.00133038413689346 -0.752666666666667 -1.02433333333333 40.0348058978765 46.7885317558826 -0.752666666666667 -1.02433333333333 9.92017675154554e-05 2.09482054407594e-05 -10.1705604386875 -13.6507646182564 Q8NC51 SERBP1 Q8NC51.S234.p_SERBP1 Q8NC51_S234s _1_1_234_234 Q8NC51 Q8NC51|Q8NC51-2 Plasminogen activator inhibitor 1 RNA-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15284.15284.3 15.65 11.68 2.102 3 1 1 0 740.0712 2138.2312 S234s TMT10 229 (K) DELTEsPKYIQK (Q) DELT(0.0)ES(0.99)PKY(0.0)IQK K:TMT10,s:Phosphorylated S SERBP1 45021.6 13 8 616.1 261.14 HUMAN 1 -40.0348 -46.7885 VKDHKSNSKERDIRR-p Q13427;S433-p VKDHKSNSKERDIRR 0.142384306016613 0.00613735637060979 2.07033333333333 -1.415 17.293749361445 31.880916548621 2.07033333333333 -1.415 0.018647690988134 0.000648497558157987 3.32071705268405 -7.01340220538528 Q13427 PPIG Q13427.S433.p_PPIG Q13427_S433s _1_1_433_433 Q13427 Q13427|E9PG73 Peptidyl-prolyl cis-trans isomerase G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4016.4016.4 8.42 4.97 1.963 2 1 1 0 411.4728 1562.9015 S433s TMT10 431 (K) SNsKERDIR (R) S(0.0)NS(0.99)KERDIR K:TMT10,s:Phosphorylated S PPIG 89129.1 1 9 112.1 571.91 HUMAN 1 17.2937 -31.8809 VKDIFTDSFSKVIKE-p P51587;S1869-p VKDIFTDSFSKVIKE 0.538206952284794 0.0010212605030329 -0.136666666666667 -1.35166666666667 4.97460524816366 51.6813208951408 -0.136666666666667 -1.35166666666667 0.318082279598074 6.78997086046775e-06 -1.09940230913085 -16.8749105058891 P51587 BRCA2 P51587.S1869.p_BRCA2 P51587_S1869s _1_1_1869_1869 P51587 P51587 Breast cancer type 2 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22834.22834.3 15.02 9.92 2.27 3 1 1 0 685.3771 1974.1515 S1869s TMT10 1862 (K) VKDIFTDsFSK (V) VKDIFT(0.0)DS(0.99)FS(0.0)K K:TMT10,s:Phosphorylated S BRCA2 388531.4 1 8 876.1 208.99 HUMAN 1 -4.9746 -51.6813 VKDLKIESDVQEPTE-p P20042;S105-p VKDLKIESDVQEPTE 0.178631329890346 0.729890352886103 -0.296333333333333 -0.035 14.770698364305 1.88507579651611 -0.296333333333333 -0.035 0.0333372800665031 0.647876787910761 -2.83555507269903 -0.483143177405298 P20042 EIF2S2 P20042.S105.p_EIF2S2 P20042_S105s _1_1_105_105 P20042 P20042 Eukaryotic translation initiation factor 2 subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26737.26737.5 24.9 24.9 6.709 2 1 1 0 794.4202 3888.097 S105s TMT10 100 (K) DLKIEsDVQEPTEPEDDLDIMLGNKK (K) DLKIES(0.99)DVQEPT(0.0)EPEDDLDIMLGNKK K:TMT10,s:Phosphorylated S EIF2S2 38730.1 19 4 622.1 259.62 HUMAN 1 -14.7707 -1.8851 VKDMKIKSLEEIYLF-p P15880;S77-p VKDMKIKSLEEIYLF 0.263992811521435 0.0110966201982267 -0.677333333333333 0.532333333333333 10.9700678300522 27.3758714088814 -0.677333333333333 0.532333333333333 0.0799821762935904 0.00182983891355836 -2.15086629345384 5.66382983362621 P15880 RPS2 P15880.S77.p_RPS2 P15880_S77s _1_1_77_77 P15880 P15880|E9PQD7|E9PPT0 40S ribosomal protein S2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36990.36990.3 19.68 19.68 4.452 3 1 1 0 854.1731 2480.5347 S77s TMT10 75 (K) IKsLEEIYLFSLPIK (E) IKS(0.99)LEEIY(0.0)LFS(0.0)LPIK K:TMT10,s:Phosphorylated S RPS2 31609.1 5 1 1346.1 151.14 HUMAN 1 -10.9701 27.3759 VKEAETDSDSD____-p O75643;S2133-p VKEAETDSDSD____ 0.212213168338447 0.00967265628027221 -0.223333333333333 -0.408333333333333 12.9968199121528 28.3847542420846 -0.223333333333333 -0.408333333333333 0.0501554358509283 0.0014505228539541 -2.51049390365337 -5.94657889375857 O75643 SNRNP200 O75643.S2133.p_SNRNP200 O75643_S2133s _1_1_2133_2133 O75643 O75643|O75643-2 U5 small nuclear ribonucleoprotein 200 kDa helicase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19194.19194.3 15.25 15.25 1.194 4 1 1 0 727.9998 2102.0177 S2133s TMT10 2122 (K) FSVDVKEAETDsDSD (-) FS(0.0)VDVKEAET(0.0)DS(0.99)DS(0.0)D K:TMT10,s:Phosphorylated S SNRNP200 246157.8 2 7 2427.1 83.94 HUMAN 1 -12.9968 -28.3848 VKEDRENSDDTEEEE-p Q9Y2D9;S100-p VKEDRENSDDTEEEE 0.311737507958546 0.0540543139764796 0.149333333333333 0.357 9.46982700999417 16.8925756843714 0.149333333333333 0.357 0.112984091807546 0.0204523130499862 1.88972926360704 3.23905783997102 Q9Y2D9 ZNF652 Q9Y2D9.S100.p_ZNF652 Q9Y2D9_S100sT103t_2_2_100_103 Q9Y2D9 Q9Y2D9|D6RF85 Zinc finger protein 652 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.11816.11816.5 13.28 13.28 5.48 5 2 2 0 849.1946 4082.0041 S100s T103t TMT10 86 (R) AVSDVHAVKEDRENsDDtEEEEEEVSYKR (E) AVS(0.0)DVHAVKEDRENS(0.99)DDT(0.99)EEEEEEVS(0.0)Y(0.0)KR K:TMT10,s:Phosphorylated S,t:Phosphorylated T ZNF652 71055.1 5 6 1862.1 110.65 HUMAN 1 9.4698 16.8926 VKEEKIHSPIIRSEP-p O60885;S1117-p VKEEKIHSPIIRSEP 0.934823846454108 0.170410364738629 -0.0143333333333333 0.173666666666667 0.576261888222869 10.1029113393937 -0.0143333333333333 0.173666666666667 0.875737226015079 0.0976582339086778 -0.163927514027635 1.99877780876948 O60885 BRD4 O60885.S1117.p_BRD4 O60885_S1117s _1_1_1117_1117 O60885 O60885 Bromodomain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.10075.10322.2 12.95 3.75 99 1 1 1 0 572.8257 1064.6778 S1117s TMT10 1115 (K) IHsPIIR (S) IHS(1.0)PIIR s:Phosphorylated S BRD4 152672.5 7 6 941.1 198.07 HUMAN 1 -0.5763 10.1029 VKEERIDTPPACTEE-p O94913;T1530-p VKEERIDTPPACTEE 0.454180425050792 0.010646171406777 0.104 0.417666666666667 6.32175960833639 27.6620141124366 0.104 0.417666666666667 0.233251281873205 0.0017131626157701 1.3416863416573 5.74296057353984 O94913 PCF11 O94913.T1530.p_PCF11 O94913_T1530t_1_1_1530_1530 O94913 O94913 Pre-mRNA cleavage complex 2 protein Pcf11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19241.19241.5 18.89 6.2 2.771 8 1 1 0 889.4516 4362.2477 T1530t N1549n TMT10 1523 (K) VKEERIDtPPACTEESIATPSEIKTEnDTVESV (-) VKEERIDT(0.99)PPACT(0.0)EES(0.0)IAT(0.0)PS(0.0)EIKT(0.0)EN(1.0)DT(0.0)VES(0.0)V K:TMT10,C:Carbamidomethylation,t:Phosphorylated T,n:Deamidated PCF11 173731.7 4 19 508.1 288.88 HUMAN 1 6.3218 27.662 VKEESPQSKAETELK-p P11171;S191-p VKEESPQSKAETELK 0.969003701508516 0.0281259447324676 -0.00766666666666667 0.301666666666667 0.26796646339584 21.0179152277186 -0.00766666666666668 0.301666666666667 0.940163428800722 0.00791058273761321 -0.078615984742491 4.09680677918303 P11171 EPB41 P11171.S191.p_EPB41 P11171_S188sS191s_2_2_188_191 P11171 P11171|P11171-2|P11171-5|P11171-7 Protein 4.1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17406.17406.3 9 6.26 2.399 3 2 2 0 1007.8749 2861.6642 S188s S191s TMT10 182 (K) IEVKEEsPQsKAETELK (A) IEVKEES(0.99)PQS(0.99)KAET(0.0)ELK K:TMT10,s:Phosphorylated S EPB41 97585.6 2 33 469.3 302.69 HUMAN 1 -0.268 21.0179 VKEKPCVSPTVGEKN-p Q68DQ2;S1280-p VKEKPCVSPTVGEKN 0.0548133552132231 0.0508197960033686 -0.481333333333333 -0.416333333333333 27.4650123162333 17.2823874455196 -0.481333333333333 -0.416333333333333 0.00179266346851258 0.018696540535451 -5.6964210197511 -3.31588270850931 Q68DQ2 CRYBG3 Q68DQ2.S1280.p_CRYBG3 Q68DQ2_S1280s _1_1_1280_1280 Q68DQ2 Q68DQ2 Very large A-kinase anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11841.11841.3 13.35 4.91 1.218 2 1 1 0 700.0452 2018.1559 S1280s TMT10 1275 (K) EKPCVsPTVGEK (N) EKPCVS(0.99)PT(0.0)VGEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CRYBG3 333308.2 3 10 582.1 265.87 HUMAN 1 -27.465 -17.2824 VKEKVFYSLMRESGY-p P07099;S292-p VKEKVFYSLMRESGY 0.559518048126481 0.136909894134177 -0.159666666666667 0.254333333333333 4.65451722968323 11.3800795060051 -0.159666666666667 0.254333333333333 0.342411448643315 0.0727766481241766 -1.04034830340532 2.22179325209914 P07099 EPHX1 P07099.S292.p_EPHX1 P07099_S292s _1_1_292_292 P07099 P07099 Epoxide hydrolase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25447.25447.2 7.54 2.52 7.542 2 1 1 0 612.8065 1144.6386 S292s TMT10 289 (K) VFYsLMR (E) VFY(0.0)S(0.99)LMR s:Phosphorylated S EPHX1 53176.1 1 2 6233.1 12.97 HUMAN 1 -4.6545 11.3801 VKELDDISQEIAQLQ-p Q9UBC2-2;S390-p VKELDDISQEIAQLQ 0.141557816596311 0.20198593648838 0.81 0.209666666666667 17.3555714555844 9.13807018279066 0.81 0.209666666666667 0.0183841203507643 0.121953138564793 3.33299909705569 1.83159627204503 Q9UBC2 EPS15L1 Q9UBC2.2.S390.p_EPS15L1 Q9UBC2-2_S390s _1_1_390_390 Q9UBC2-2 Q9UBC2-2|M0R165|Q9UBC2-3 Isoform 2 of Epidermal growth factor receptor substrate 15-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27546.27546.3 8.57 8.57 99 1 1 1 0 656.3256 1887.0021 S390s TMT10 385 (K) ELDDIsQEIAQLQR (E) ELDDIS(1.0)QEIAQLQR s:Phosphorylated S EPS15L1 99718.3 1 9 109.1 576.24 HUMAN 1 17.3556 9.1381 VKEMAHGSQEAEAPG-p Q8IVD9;S146-p VKEMAHGSQEAEAPG 0.246521486505206 0.067098320356148 0.172666666666667 0.335333333333333 11.6324942947416 15.604996454535 0.172666666666667 0.335333333333333 0.0686673947514084 0.0275106185088339 2.26731377366 2.99065881612366 Q8IVD9 NUDCD3 Q8IVD9.S146.p_NUDCD3 Q8IVD9_S146s _1_1_146_146 Q8IVD9 Q8IVD9 NudC domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18535.18535.3 18.06 18.06 99 1 1 1 0 1116.2238 3266.6789 S146s TMT10 141 (K) EMAHGsQEAEAPGAVAGAAEVPREPPILPR (I) EMAHGS(1.0)QEAEAPGAVAGAAEVPREPPILPR s:Phosphorylated S NUDCD3 40878.4 1 1 4349.1 33.04 HUMAN 1 11.6325 15.605 VKERGTVYFKEGKYK-p Q02790;Y280-p VKERGTVYFKEGKYK 0.174348179228281 0.323413647748824 0.584666666666667 -0.215666666666667 15.1118799098598 6.48208875295297 0.584666666666667 -0.215666666666667 0.030818536341617 0.224797317603765 2.89946080156665 -1.36966410277758 Q02790 FKBP4 Q02790.Y280.p_FKBP4 Q02790_Y280y _1_1_280_280 Q02790 Q02790 Peptidyl-prolyl cis-trans isomerase FKBP4 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11776.11776.3 10.16 10.16 4.873 2 1 1 0 522.951 1486.867 Y280y Hydrogen 277 (R) GTVyFKEGK (Y) GT(0.0)VY(0.99)FKEGK K:TMT10-Lys-Only,y:Phosphorylated Y FKBP4 52088.9 1 1 338.1 10.16 HUMAN 1 15.1119 -6.4821 VKEVAKPSPGEGEVL-p Q53FA7;S24-p VKEVAKPSPGEGEVL 0.183956421457418 0.222613125243212 0.241 0.242333333333333 14.4547958486233 8.59299690342661 0.241 0.242333333333333 0.0358525801314912 0.138261196101781 2.77680930156522 1.73731399431695 Q53FA7 TP53I3 Q53FA7.S24.p_TP53I3 Q53FA7_S24s _1_1_24_24 Q53FA7 Q53FA7|Q53FA7-2 Quinone oxidoreductase PIG3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19793.19793.3 13.17 6.62 99 1 1 1 0 774.1096 2240.3469 S24s TMT10 19 (K) EVAKPsPGEGEVLLK (V) EVAKPS(1.0)PGEGEVLLK K:TMT10,s:Phosphorylated S TP53I3 35706.7 1 1 2518.1 80.27 HUMAN 1 14.4548 8.593 VKEVFGSSLPSNWQD-p Q8N5N7;S81-p VKEVFGSSLPSNWQD 0.495177181822112 0.763057248401207 -0.109333333333333 -0.0313333333333333 5.62210305484184 1.62357657975486 -0.109333333333333 -0.0313333333333333 0.274024689624345 0.688085398525618 -1.21693924177174 -0.423680866159006 Q8N5N7 MRPL50 Q8N5N7.S81.p_MRPL50 Q8N5N7_S81s _1_1_81_81 Q8N5N7 Q8N5N7|Q8N5N7-2 39S ribosomal protein L50, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29049.29049.3 15.43 15.43 1.111 5 1 1 0 859.0682 2495.2252 S81s TMT10 76 (K) EVFGSsLPSNWQDISLEDSR (L) EVFGS(0.0)S(0.99)LPS(0.0)NWQDIS(0.0)LEDS(0.0)R s:Phosphorylated S MRPL50 18495.8 1 1 5912.1 15.43 HUMAN 1 -5.6221 -1.6236 VKFQRAITGASLADI-p P83731;T83-p VKFQRAITGASLADI 0.117289050573617 0.0042417883900573 -0.277 -0.689333333333333 19.3640071784188 34.8813290982371 -0.277 -0.689333333333333 0.011577086605463 0.000324987824133151 -3.74376930182659 -8.05062841538649 P83731 RPL24 P83731.T83.p_RPL24 P83731_T83t _1_1_83_83 P83731 P83731|C9JNW5|C9JXB8 60S ribosomal protein L24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28716.28716.3 16.55 16.55 3.481 2 1 1 0 600.6628 1720.0079 T83t TMT10 81 (R) AItGASLADIMAK (R) AIT(0.99)GAS(0.0)LADIMAK K:TMT10,t:Phosphorylated T RPL24 17892.7 3 3 2884.1 66.97 HUMAN 1 -19.364 -34.8813 VKFSPNTSQFLLVSS-p O43684;S27-p VKFSPNTSQFLLVSS 0.25567774491366 0.00568315877546512 0.198 0.523333333333333 11.2582480877007 32.5362245858394 0.198 0.523333333333333 0.0748471367518219 0.000557670332935273 2.20141548819297 7.22970707909334 O43684 BUB3 O43684.S27.p_BUB3 O43684_S27s _1_1_27_27 O43684 O43684|O43684-2|J3QSX4 Mitotic checkpoint protein BUB3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33836.33836.3 11.86 11.86 1.294 7 1 1 0 827.407 2400.2397 S27s TMT10 22 (K) FSPNTsQFLLVSSWDTSVR (L) FS(0.0)PNT(0.0)S(0.99)QFLLVS(0.0)S(0.0)WDT(0.0)S(0.0)VR s:Phosphorylated S BUB3 37610.5 1 1 3162.1 58.97 HUMAN 1 11.2582 32.5362 VKGDMDVSLPKVEGD-p Q09666;S3894-p VKGDMDVSLPKVEGD 0.761770448655304 0.126246717356981 -0.0646666666666667 0.260333333333333 2.26219383047715 11.8511435833737 -0.0646666666666667 0.260333333333333 0.593992028851187 0.0652958593080264 -0.566114472144723 2.30482587576032 Q09666 AHNAK Q09666.S3894.p_AHNAK Q09666_S3894s _1_1_3894_3894 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28359.28359.4 12.67 12.67 99 1 1 1 0 906.9921 3544.9776 S3894s TMT10 3887 (K) VKGDMDVsLPKVEGDMQVPDLDIK (G) VKGDMDVS(1.0)LPKVEGDMQVPDLDIK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 92 1.1 4313.36 HUMAN 1 -2.2622 11.8511 VKGDVDVSLPKLEGD-p Q09666;S2138-p VKGDVDVSLPKLEGD 0.124542516675675 0.0238118372059259 -0.798666666666667 0.519 18.8200857655905 22.1309488869576 -0.798666666666667 0.519 0.0131217398561422 0.00612216614333555 -3.63017860729061 4.34730591586193 Q09666 AHNAK Q09666.S2138.p_AHNAK Q09666_S2138s _1_1_2138_2138 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18130.18130.3 12.86 12.86 99 1 1 1 0 642.0428 1844.146 S2138s TMT10 2131 (K) VKGDVDVsLPK (L) VKGDVDVS(1.0)LPK K:TMT10,s:Phosphorylated S AHNAK 629603.7 2 63 1.1 4313.36 HUMAN 1 -18.8201 22.1309 VKGGVDVTLPRVEGK-p Q09666;T590-p VKGGVDVTLPRVEGK 0.11679910130242 0.0941395540340676 0.473333333333333 -0.407 19.406224732794 13.572417386647 0.473333333333333 -0.407 0.0114650915434591 0.0439297024172458 3.75266265534296 -2.61323326434397 Q09666 AHNAK Q09666.T590.p_AHNAK Q09666_T590t _1_1_590_590 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17778.17778.4 8.97 8.97 99 1 1 1 0 581.0941 2241.3898 T590t TMT10 583 (K) VKGGVDVtLPRVEGK (V) VKGGVDVT(1.0)LPRVEGK K:TMT10,t:Phosphorylated T AHNAK 629603.7 1 32 1.1 4313.36 HUMAN 1 19.4062 -13.5724 VKGVKRYSAEVRLER-p Q6NV74;S710-p VKGVKRYSAEVRLER 0.120260347431319 0.0169160509929544 -0.692 -0.423 19.1237763089329 24.4435590130227 -0.692 -0.423 0.0122355182490828 0.00359454643847123 -3.69337550157781 -4.89827683977704 Q6NV74 KIAA1211L Q6NV74.S710.p_KIAA1211L Q6NV74_S710s _1_1_710_710 Q6NV74 Q6NV74 Uncharacterized protein KIAA1211-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4858.4858.3 7.36 7.36 7.365 2 1 1 0 397.2023 1109.6265 S710s TMT10 708 (K) RYsAEVR (L) RY(0.0)S(0.99)AEVR s:Phosphorylated S KIAA1211L 102725.9 1 9 756.1 230.87 HUMAN 1 -19.1238 -24.4436 VKHKLVCSPDFESLL-p P05423;S386-p VKHKLVCSPDFESLL 0.601861285397072 0.630256552090623 -0.0913333333333333 -0.046 4.07329460505623 2.7258989555818 -0.0913333333333333 -0.046 0.391444810163161 0.533838761692141 -0.931114247152746 -0.664078935898178 P05423 POLR3D P05423.S386.p_POLR3D P05423_S386s _1_1_386_386 P05423 P05423 DNA-directed RNA polymerase III subunit RPC4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27872.27872.3 11.3 11.3 2.49 2 1 1 0 733.3702 2118.1305 S386s TMT10 383 (K) LVCsPDFESLLDHK (H) LVCS(0.99)PDFES(0.0)LLDHK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S POLR3D 44566.2 1 1 6503.1 11.3 HUMAN 1 -4.0733 -2.7259 VKIGRRFSEERDPEL-p Q8NBA8;S132-p VKIGRRFSEERDPEL 0.588016328588642 0.72402612350121 0.102666666666667 0.0483333333333333 4.24713568195074 1.93030246639651 0.102666666666667 0.0483333333333334 0.376085363445991 0.64116492080329 0.964084757413748 0.4932545522371 Q8NBA8 DTWD2 Q8NBA8.S132.p_DTWD2 Q8NBA8_S132s _1_1_132_132 Q8NBA8 Q8NBA8|J3KND6 DTW domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9769.9769.5 8.1 6.18 8.101 3 1 1 0 510.2637 2467.3128 S132s TMT10 130 (R) RFsEERDPELSTVCRK (S) RFS(0.99)EERDPELS(0.0)T(0.0)VCRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DTWD2 33985.6 1 2 5642.1 17.52 HUMAN 1 4.2471 1.9303 VKISGQLSPRLFRKL-p Q66K64;S50-p VKISGQLSPRLFRKL 0.361131241199818 0.0298310132766052 -0.134 -0.287 8.22197698780681 20.642078822516 -0.134 -0.287 0.150592138721022 0.00862565567630168 -1.67364729753562 -4.01421138621693 Q66K64 DCAF15 Q66K64.S50.p_DCAF15 Q66K64_S50s _1_1_50_50 Q66K64 Q66K64 DDB1- and CUL4-associated factor 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10079.10079.2 9.98 2.54 3.92 2 1 1 0 583.8115 1086.6469 S50s TMT10 45 (K) ISGQLsPR (L) IS(0.0)GQLS(0.99)PR s:Phosphorylated S DCAF15 67432.2 2 1 3179.1 58.55 HUMAN 1 -8.222 -20.6421 VKKERRQSSSRFNLS-p Q14738;S88-p VKKERRQSSSRFNLS 0.373103912371413 0.520214955888018 0.189333333333333 -0.1 7.94271600370684 3.8128267530415 0.189333333333333 -0.1 0.160593661350279 0.415639989037689 1.62522176218908 -0.881033664237831 Q14738 PPP2R5D Q14738.S88.p_PPP2R5D Q14738_S88s _1_1_88_88 Q14738 Q14738|E9PFR3 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7139.7139.3 10.86 10.86 1.147 4 1 1 0 540.2803 1538.8601 S88s Hydrogen 86 (R) RQsSSRFNLSK (N) RQS(0.99)S(0.0)S(0.0)RFNLS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S PPP2R5D 70332.8 11 4 2426.1 83.98 HUMAN 1 7.9427 -3.8128 VKKETVNSPAIYKFQ-p Q9Y3A2;S241-p VKKETVNSPAIYKFQ 0.137499094333126 0.00126811416455663 -0.308333333333333 -0.988333333333333 17.6424371324626 47.4101890129443 -0.308333333333333 -0.988333333333333 0.0172090258422596 1.81543664991252e-05 -3.39025955189931 -14.0249850018257 Q9Y3A2 UTP11L Q9Y3A2.S241.p_UTP11L Q9Y3A2_S241s _1_1_241_241 Q9Y3A2 Q9Y3A2 Probable U3 small nucleolar RNA-associated protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13981.13981.2 13.93 13.93 3.192 3 1 1 0 830.4412 1579.9096 S241s TMT10 237 (K) ETVNsPAIYK (F) ET(0.0)VNS(0.99)PAIY(0.0)K K:TMT10,s:Phosphorylated S UTP11 30503 3 1 6109.1 13.93 HUMAN 1 -17.6424 -47.4102 VKKKAEPSEVDMNSP-p Q9NR30;S65-p VKKKAEPSEVDMNSP 0.701391719781544 0.997992920407743 0.0866666666666667 -0.000333333333333297 2.89760846880228 0.0117990224484112 0.0866666666666667 -0.000333333333333298 0.513143879352986 0.997286861909806 0.699537572953573 -0.00355998322330451 Q9NR30 DDX21 Q9NR30.S65.p_DDX21 Q9NR30_S65s _1_1_65_65 Q9NR30 Q9NR30 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11414.11414.3 12.67 12.67 2.482 2 1 1 0 733.7182 2119.1672 S65s TMT10 61 (K) KAEPsEVDMNSPK (S) KAEPS(0.99)EVDMNS(0.0)PK K:TMT10,s:Phosphorylated S DDX21 87856.3 1 15 103.1 590.75 HUMAN 1 2.8976 -0.0118 VKKLQGGTPQEPPNP-p Q9H0B6;T568-p VKKLQGGTPQEPPNP 0.192059131883792 0.240926214726115 0.259333333333333 -0.187 13.9860016251354 8.14415751776106 0.259333333333333 -0.187 0.039939243772485 0.153314859102627 2.69034871936953 -1.65962315770169 Q9H0B6 KLC2 Q9H0B6.T568.p_KLC2 Q9H0B6_T568t _1_1_568_568 Q9H0B6 Q9H0B6|Q9H0B6-2|A8MZ87 Kinesin light chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7998.7998.3 11.38 11.38 99 1 1 1 0 686.3697 1977.1282 T568t TMT10 563 (K) KLQGGtPQEPPNPR (M) KLQGGT(1.0)PQEPPNPR K:TMT10,t:Phosphorylated T KLC2 69332.8 1 7 1131.1 174.01 HUMAN 1 13.986 -8.1442 VKKMTAKSVPADLSR-p E7EVA0;S1998-p VKKMTAKSVPADLSR 0.276230295661083 0.0126231003819755 -0.176333333333333 0.429333333333333 10.5678202504009 26.4738128142231 -0.176333333333333 0.429333333333333 0.0877441103505134 0.00225226100983177 -2.08055647283098 5.4197064389147 E7EVA0 NotFound E7EVA0.S1998.p_NotFound E7EVA0_S1998s _1_1_1998_1998 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2|P27816-4 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11394.11394.3 11.85 11.85 11.849 2 1 1 0 536.6359 1527.9259 S1998s TMT10 1998 (K) sVPADLSRPK (S) S(0.99)VPADLS(0.0)RPK K:TMT10,s:Phosphorylated S MAP4 246695.2 1 35 38.1 865.62 HUMAN 1 -10.5678 26.4738 VKKNLRKSREDLTAV-p A0A1B0GTW1;S761-p VKKNLRKSREDLTAV 0.368932067855776 0.0584454148473786 -0.129333333333333 -0.216 8.03077275731667 16.426487834736 -0.129333333333333 -0.216 0.157370282439646 0.0227693805973758 -1.64049845789144 -3.14821636697603 A0A1B0GTW1 NotFound A0A1B0GTW1.S761.p_NotFound A0A1B0GTW1_S761s _1_1_761_761 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19215.19215.5 19.84 19.84 4.098 6 1 1 0 707.595 3453.9785 S761s TMT10 757 (K) NLRKsREDLTAVVSVSTKFPAYER (V) NLRKS(0.99)REDLT(0.0)AVVS(0.0)VS(0.0)T(0.0)KFPAY(0.0)ER K:TMT10,s:Phosphorylated S TJP2 141123.7 18 19 41.1 827.72 HUMAN 1 -8.0308 -16.4265 VKKPKHMSADDLNDG-p P78316;S313-p VKKPKHMSADDLNDG 0.43276554026149 0.452706056132002 0.128666666666667 0.114666666666667 6.70021028534585 4.58734751401811 0.128666666666667 0.114666666666667 0.213785857190486 0.347748486582233 1.40842766664958 1.02767024573903 P78316 NOP14 P78316.S313.p_NOP14 P78316_S313s _1_1_313_313 P78316 P78316|P78316-2|E9PFK5 Nucleolar protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16074.16074.4 15.33 10.56 99 1 1 1 0 690.0803 2677.3404 S313s TMT10 311 (K) HMsADDLNDGFVLDKDDRR (L) HMS(1.0)ADDLNDGFVLDKDDRR K:TMT10,s:Phosphorylated S NOP14 98351.3 1 3 2153.1 95.6 HUMAN 1 6.7002 4.5873 VKKSIRDTPAKNAQK-p P06748;T199-p VKKSIRDTPAKNAQK 0.769815043630263 0.00103215678026976 -0.0436666666666667 -1.23 2.17711992708546 51.3654110623211 -0.0436666666666667 -1.23 0.605742446531636 7.30228693020349e-06 -0.547678798959881 -16.6463113709652 P06748 NPM1 P06748.T199.p_NPM1 P06748_T199t_1_1_199_199 P06748 P06748|P06748-3 Nucleophosmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7250.7250.4 13.48 9.98 3.261 2 1 1 0 525.0474 2016.2169 T199t N203n TMT10 195 (K) SIRDtPAKnAQK (S) S(0.0)IRDT(0.99)PAKN(1.0)AQK K:TMT10,t:Phosphorylated T,n:Deamidated NPM1 32745.6 20 13 78.1 640.75 HUMAN 1 -2.1771 -51.3654 VKLEGKKSPLSSILF-p Q7Z3B3;S268-p VKLEGKKSPLSSILF 0.735825275323593 0.00840448513471 -0.0473333333333333 0.435666666666667 2.52371760407487 29.4782660330629 -0.0473333333333334 0.435666666666667 0.559278648429625 0.00112764759161035 -0.621895015370511 6.26523799259873 Q7Z3B3 KANSL1 Q7Z3B3.S268.p_KANSL1 Q7Z3B3_S268s _1_1_268_268 Q7Z3B3 Q7Z3B3|A0A0G2JQF4|A0A0G2JNT7|A0A0G2JNB1 KAT8 regulatory NSL complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36732.36732.3 21.95 21.95 3.884 6 1 1 0 673.3394 1938.0381 S268s TMT10 268 (K) sPLSSILFSALDSDTR (I) S(0.99)PLS(0.0)S(0.0)ILFS(0.0)ALDS(0.0)DT(0.0)R s:Phosphorylated S KANSL1 121821.3 5 4 391.1 332.08 HUMAN 1 -2.5237 29.4783 VKLFARSTAVTTSSA-p Q9UKM9-2;T155-p VKLFARSTAVTTSSA 0.049158581421578 0.82807928418745 0.460333333333333 0.026 29.0176887214184 1.14534225383957 0.460333333333333 0.026 0.00125380826359291 0.768184915053579 6.13873205018409 0.309917740411131 Q9UKM9 RALY Q9UKM9.2.T155.p_RALY Q9UKM9-2_T155t _1_1_155_155 Q9UKM9-2 Q9UKM9|Q9UKM9-2 Isoform 1 of RNA-binding protein Raly HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7235.7235.2 14.03 14.03 1.429 6 1 1 0 745.8981 1410.8204 T155t TMT10 154 (R) StAVTTSSAK (I) S(0.0)T(0.99)AVT(0.0)T(0.0)S(0.0)S(0.0)AK K:TMT10,t:Phosphorylated T RALY 30420.5 1 9 967.1 193.88 HUMAN 1 29.0177 1.1453 VKLFSGLSVSSEGPS-p Q15398;S627-p VKLFSGLSVSSEGPS 0.988065176179498 0.237516931787841 -0.00533333333333334 -0.255666666666667 0.107065840155468 8.22284191909468 -0.00533333333333337 -0.255666666666667 0.975648578176576 0.150562150109967 -0.0319614509551408 -1.67325117949116 Q15398 DLGAP5 Q15398.S627.p_DLGAP5 Q15398_S627s _1_1_627_627 Q15398 Q15398|Q15398-3|Q15398-1 Disks large-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23161.23161.3 14.35 14.35 1.387 5 1 1 0 620.6415 1779.9438 S627s TMT10 622 (K) LFSGLsVSSEGPSQR (L) LFS(0.0)GLS(0.99)VS(0.0)S(0.0)EGPS(0.0)QR s:Phosphorylated S DLGAP5 95797.9 1 5 355.1 348.78 HUMAN 1 -0.1071 -8.2228 VKLKEIDSKEEKYVA-p Q14739;S182-p VKLKEIDSKEEKYVA 0.123743629200835 0.0242925225921455 -0.296666666666667 -0.332 18.8721134052557 21.9993931778867 -0.296666666666667 -0.332 0.012965481787937 0.00631045511757345 -3.64096551579351 -4.31722537538198 Q14739 LBR Q14739.S182.p_LBR Q14739_S182s _1_1_182_182 Q14739 Q14739 Lamin-B receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12470.12470.3 8.49 8.49 99 1 1 1 0 739.0999 2135.3093 S182s TMT10 177 (K) LKEIDsKEEK (Y) LKEIDS(1.0)KEEK K:TMT10,s:Phosphorylated S LBR 71101.3 1 8 1716.1 119.76 HUMAN 1 -18.8721 -21.9994 VKLKKTQSLDEKRKL-p Q96HE9;S242-p VKLKKTQSLDEKRKL 0.744043857023488 0.00235687401929515 -0.056 -0.837666666666667 2.43948898153415 40.3573373611154 -0.056 -0.837666666666667 0.570231365376887 9.21014068050333e-05 -0.604071153094467 -10.2932640836986 Q96HE9 PRR11 Q96HE9.S242.p_PRR11 Q96HE9_S242s _1_1_242_242 Q96HE9 Q96HE9 Proline-rich protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9021.9021.2 7.93 7.93 2.254 2 1 1 0 679.8524 1278.7306 S242s TMT10 240 (K) TQsLDEK (R) T(0.0)QS(0.99)LDEK K:TMT10,s:Phosphorylated S PRR11 40597.8 2 3 1094.1 178.6 HUMAN 1 -2.4395 -40.3573 VKLQRQLSQDDCKLW-p Q6P0Q8;S92-p VKLQRQLSQDDCKLW 0.930629684792009 0.0169961888261017 -0.0153333333333333 -0.365666666666667 0.620365145584104 24.4151470589317 -0.0153333333333333 -0.365666666666667 0.866888986507736 0.00361813938936832 -0.175738203423147 -4.8912407810429 Q6P0Q8 MAST2 Q6P0Q8.S92.p_MAST2 Q6P0Q8_S92s _1_1_92_92 Q6P0Q8 Q6P0Q8|Q6P0Q8-2 Microtubule-associated serine/threonine-protein kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8158.8158.2 10.85 10.85 99 1 1 1 0 766.3651 1451.7565 S92s TMT10 90 (R) QLsQDDCK (L) QLS(1.0)QDDCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAST2 197687.5 1 38 121.1 549.41 HUMAN 1 -0.6204 -24.4151 VKLSSQISAGEEKWN-p Q86UE4;S298-p VKLSSQISAGEEKWN 0.771946133060809 0.327657775514947 -0.0423333333333333 -0.102 2.15227173079438 6.41611655410955 -0.0423333333333333 -0.102 0.609218140796909 0.228238205775071 -0.542265736565892 -1.3580239916295 Q86UE4 MTDH Q86UE4.S298.p_MTDH Q86UE4_S298s _1_1_298_298 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13300.13300.2 13.85 13.85 3.827 3 1 1 0 843.9393 1606.9052 S298s TMT10 293 (K) LSSQIsAGEEK (W) LS(0.0)S(0.0)QIS(0.99)AGEEK K:TMT10,s:Phosphorylated S MTDH 63892.9 2 12 77.1 644.48 HUMAN 1 -2.1523 -6.4161 VKMGRKDSLDLEEEA-p Q96TC7;S212-p VKMGRKDSLDLEEEA 0.207985684543594 0.0556130762469733 0.200666666666667 0.266666666666667 13.1565979221331 16.7191259211479 0.200666666666667 0.266666666666667 0.0483437357969369 0.0212856740706402 2.53932369797195 3.20512510543404 Q96TC7 RMDN3 Q96TC7.S212.p_RMDN3 Q96TC7_S212s _1_1_212_212 Q96TC7 Q96TC7|Q96TC7-2 Regulator of microtubule dynamics protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31351.31351.5 40.68 40.68 7.544 6 1 1 0 1104.1481 5436.7407 S212s Hydrogen 210 (R) KDsLDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHRGDEQGKR (E) KDS(0.99)LDLEEEAAS(0.0)GAS(0.0)S(0.0)ALEAGGS(0.0)S(0.0)GLEDVLPLLQQADELHRGDEQGKR K:TMT10-Lys-Only,s:Phosphorylated S RMDN3 52573.8 24 2 697.1 241.25 HUMAN 1 13.1566 16.7191 VKMGWSGSGGLGAKE-p J3QK89;S868-p VKMGWSGSGGLGAKE 0.269424134699647 0.0503819623961807 -0.162333333333333 -0.312 10.79549550647 17.3432354483439 -0.162333333333333 -0.312 0.0832626922345704 0.0184364141391492 -2.12031916361562 -3.32794656959205 J3QK89 NotFound J3QK89.S868.p_NotFound J3QK89_S868s _1_1_868_868 J3QK89 J3QK89|Q8IWX8 Calcium homeostasis endoplasmic reticulum protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19239.19239.2 16.77 16.77 2.123 2 1 1 0 823.4126 1565.851 S868s TMT10 863 (K) MGWSGsGGLGAK (E) MGWS(0.0)GS(0.99)GGLGAK K:TMT10,s:Phosphorylated S CHERP 105388.1 3 4 2291.1 89.54 HUMAN 1 -10.7955 -17.3432 VKMPFQTSPGGKAEG-p P51608-2;S241-p VKMPFQTSPGGKAEG 0.133746615276982 0.00244664020608596 -0.557 -0.723 17.9890100259197 40.0517352386544 -0.557 -0.724332619733012 0.0158890889903371 9.88158193739062e-05 -3.46004147740228 -10.1546569531802 P51608 MECP2 P51608.2.S241.p_MECP2 P51608-2_S241s _1_1_241_241 P51608-2 P51608-2|A0A087X1U4|I6LM39 Isoform B of Methyl-CpG-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.23561.23561.3 10.47 10.47 1.101 6 1 1 0 1116.5841 3267.7684 S241s TMT10 236 (K) MPFQTsPGGKAEGGGATTSTQVMVIK (R) MPFQT(0.0)S(0.99)PGGKAEGGGAT(0.0)T(0.0)S(0.0)T(0.0)QVMVIK K:TMT10,s:Phosphorylated S MECP2 53493.6 6 4 1786.1 114.94 HUMAN 1 -17.989 -40.0517 VKMTLIPSPNSPFQK-p Q96AY4;S2117-p VKMTLIPSPNSPFQK 0.59900687186863 0.0584532875960956 -0.0706666666666667 -0.226666666666667 4.1126479318305 16.4246535012351 -0.0706666666666667 -0.226666666666667 0.387913779414593 0.0227789997523759 -0.938602021205483 -3.14786097952386 Q96AY4 TTC28 Q96AY4.S2117.p_TTC28 Q96AY4_S2117s _1_1_2117_2117 Q96AY4 Q96AY4|A0A087WW06 Tetratricopeptide repeat protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27145.27145.3 8.41 9.73 1.137 3 1 1 0 666.691 1918.0872 S2117s TMT10 2112 (K) MTLIPsPNSPFQK (V) MT(0.0)LIPS(0.99)PNS(0.0)PFQK K:TMT10,s:Phosphorylated S TTC28 272819.5 2 5 1011.1 188.93 HUMAN 1 -4.1126 -16.4247 VKNLVSRTPEQHKSQ-p Q7Z5J4;T472-p VKNLVSRTPEQHKSQ 0.594040315504799 0.0320543638596711 -0.0723333333333333 -0.317 4.17174984606885 20.1761651953683 -0.0723333333333333 -0.317 0.382670527809995 0.00960248152941873 -0.94982063491162 -3.91315678174466 Q7Z5J4 RAI1 Q7Z5J4.T472.p_RAI1 Q7Z5J4_T472t _1_1_472_472 Q7Z5J4 Q7Z5J4|Q7Z5J4-2|A0A1W2PQJ7 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.6357.6357.4 8.38 8.38 1.154 2 1 1 0 462.5039 1767.0277 T472t TMT10 467 (K) NLVSRtPEQHK (S) NLVS(0.0)RT(0.99)PEQHK K:TMT10,t:Phosphorylated T RAI1 206315.3 2 1 142.1 522.21 HUMAN 1 -4.1717 -20.1762 VKNVDLASPEEHQKH-p Q8N3R9;S25-p VKNVDLASPEEHQKH 0.301590454921122 0.250441300337034 -0.3 -0.136666666666667 9.76690707597252 7.92303785985802 -0.3 -0.136666666666667 0.105513806874635 0.161322971903666 -1.94124122609654 -1.62129815109945 Q8N3R9 MPP5 Q8N3R9.S25.p_MPP5 Q8N3R9_S25s _1_1_25_25 Q8N3R9 Q8N3R9|G3V2B0 MAGUK p55 subfamily member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10567.10567.3 14.99 14.99 99 1 1 1 0 635.657 1824.9856 S25s TMT10 20 (K) NVDLAsPEEHQK (H) NVDLAS(1.0)PEEHQK K:TMT10,s:Phosphorylated S MPP5 77577.4 1 1 2822.1 69.26 HUMAN 1 -9.7669 -7.923 VKPIVSASPPSRAVA-p Q96EV2;S741-p VKPIVSASPPSRAVA 0.749713558361595 0.320544010429878 0.0453333333333333 0.099 2.37995694254433 6.53433793348316 0.0453333333333333 0.099 0.578101778878109 0.222109025496586 0.59139384279496 1.37887324978129 Q96EV2 RBM33 Q96EV2.S741.p_RBM33 Q96EV2_S741s _1_1_741_741 Q96EV2 Q96EV2 RNA-binding protein 33 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11415.11415.2 7.95 7.95 1.237 3 1 1 0 660.3473 1239.7259 S741s TMT10 736 (K) PIVSAsPPSR (A) PIVS(0.0)AS(0.99)PPS(0.0)R s:Phosphorylated S RBM33 130268.8 4 4 662.1 251.2 HUMAN 1 2.38 6.5343 VKPKITHSPDSVKSK-p Q15652;S652-p VKPKITHSPDSVKSK 0.952486695139008 0.00635603975750132 -0.0103333333333333 -0.701 0.417732326522438 31.6290994559057 -0.0103333333333333 -0.701 0.908294673456251 0.000687210923883159 -0.120685688045692 -6.93172647888009 Q15652 JMJD1C Q15652.S652.p_JMJD1C Q15652_S652s _1_1_652_652 Q15652 Q15652|Q15652-3|A0A1W2PNZ9|Q15652-2 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7924.7924.3 15.44 15.44 4.312 3 1 1 0 507.9406 1441.8415 S652s TMT10 649 (K) ITHsPDSVK (S) IT(0.0)HS(0.99)PDS(0.0)VK K:TMT10,s:Phosphorylated S JMJD1C 286573.8 4 10 377.1 336.35 HUMAN 1 -0.4177 -31.6291 VKPPGGHSPQVNHLK-p Q92610;S1089-p VKPPGGHSPQVNHLK 0.775124418170112 0.274787389920006 -0.0403333333333333 0.153666666666667 2.11878318128466 7.39250581421559 -0.0403333333333333 0.153666666666667 0.613933994854055 0.182284364531395 -0.534949645608632 1.52911283207955 Q92610 ZNF592 Q92610.S1089.p_ZNF592 Q92610_S1089s _1_1_1089_1089 Q92610 Q92610 Zinc finger protein 592 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.8174.8174.5 13.73 13.73 99 1 1 1 0 473.2726 2282.37 S1089s TMT10 1082 (K) VKPPGGHsPQVNHLK (R) VKPPGGHS(1.0)PQVNHLK K:TMT10,s:Phosphorylated S ZNF592 140207.3 5 17 164.1 494.76 HUMAN 1 -2.1188 7.3925 VKPPPQISPSKSMGG-p Q9H6U6;S570-p VKPPPQISPSKSMGG 0.349626491254527 0.00442634374054194 -0.154 -1.00166666666667 8.4773576588672 34.5803651316096 -0.154 -1.00166666666667 0.141992116954235 0.000348308029925723 -1.7178858239062 -7.94100214802296 Q9H6U6 BCAS3 Q9H6U6.S570.p_BCAS3 Q9H6U6_S570s _1_1_570_570 Q9H6U6 Q9H6U6-8|Q9H6U6-3|Q9H6U6-7|Q9H6U6-2|K7ESE9|Q9H6U6-6 Breast carcinoma-amplified sequence 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13122.13357.3 14.01 14.01 3.433 2 1 1 0 649.0551 1865.1827 S570s TMT10 563 (K) VKPPPQIsPSK (S) VKPPPQIS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S BCAS3 102547.1 4 6 847.1 212.9 HUMAN 1 -8.4774 -34.5804 VKPRLEVSPEAQPTA-p Q6WKZ4;S545-p VKPRLEVSPEAQPTA 0.214901183725954 0.0507464615862734 0.204 -0.447333333333333 12.8699911906634 17.2912337811338 0.204 -0.447333333333333 0.0516417416784865 0.0186584954893972 2.48766621355204 -3.31763538365958 Q6WKZ4 RAB11FIP1 Q6WKZ4.S545.p_RAB11FIP1 Q6WKZ4_S545s _1_1_545_545 Q6WKZ4 Q6WKZ4 Rab11 family-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.12974.12974.2 14.84 14.84 1.473 2 1 1 0 803.9057 1526.8376 S545s TMT10 542 (R) LEVsPEAQPTAR (L) LEVS(0.99)PEAQPT(0.0)AR s:Phosphorylated S RAB11FIP1 137564.1 3 14 56.1 721.17 HUMAN 1 12.87 -17.2912 VKPTEPCTPSKSRSA-p Q5H9F3-3;T1461-p VKPTEPCTPSKSRSA 0.707493278498265 0.00104745705872082 -0.0843333333333334 -1.30033333333333 2.82456852131146 51.1170294713832 -0.0843333333333333 -1.30033333333333 0.521846948013492 7.73209271283193e-06 -0.684549239507668 -16.4686825650243 Q5H9F3 BCORL1 Q5H9F3.3.T1461.p_BCORL1 Q5H9F3-3_T1461t _1_1_1461_1461 Q5H9F3-3 Q5H9F3-3 Isoform 3 of BCL-6 corepressor-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11512.11512.4 13.35 13.35 3.684 5 1 1 0 599.0754 2313.3091 T1461t TMT10 1450 (K) SPTPVKPTEPCtPSK (S) S(0.0)PT(0.0)PVKPT(0.0)EPCT(0.99)PS(0.0)K K:TMT10,C:Carbamidomethylation,t:Phosphorylated T BCORL1 192474.8 1 7 1277.1 159.01 HUMAN 1 -2.8246 -51.117 VKPTKNMSPKEQFWG-p Q92613;S741-p VKPTKNMSPKEQFWG 0.201297381037897 0.00382266961587119 0.630333333333333 -0.968666666666667 13.5249733251406 35.8193910192464 0.630333333333333 -0.968666666666667 0.044412238920727 0.000261855016343751 2.60610860532774 -8.40080634492566 Q92613 JADE3 Q92613.S741.p_JADE3 Q92613_S741s _1_1_741_741 Q92613 Q92613 Protein Jade-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16695.16695.3 12.32 12.32 99 1 1 1 0 639.9874 1837.9783 S741s TMT10 739 (K) NMsPKEQFWGR (Q) NMS(1.0)PKEQFWGR K:TMT10,s:Phosphorylated S JADE3 95461.1 2 7 1439.1 142.43 HUMAN 1 13.525 -35.8194 VKPTPGLTPRFDSRV-p Q53HL2;T189-p VKPTPGLTPRFDSRV 0.540681762076603 0.112300247886504 0.0906666666666667 -0.170333333333333 4.92937549050139 12.528352201046 0.0906666666666667 -0.170333333333333 0.321412269183853 0.0558682129551349 1.0910997527793 -2.4251423512193 Q53HL2 CDCA8 Q53HL2.T189.p_CDCA8 Q53HL2_T189t _1_1_189_189 Q53HL2 Q53HL2 Borealin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21903.21903.4 11.66 7.12 4.167 5 1 1 0 783.1865 3049.7596 T189t TMT10 167 (R) ANTVTPAVGRLEVSMVKPTPGLtPR (F) ANT(0.0)VT(0.0)PAVGRLEVS(0.0)MVKPT(0.0)PGLT(0.99)PR K:TMT10,t:Phosphorylated T CDCA8 31436.5 2 2 2168.1 94.69 HUMAN 1 4.9294 -12.5284 VKQAPRKSPSDTEGL-p O95297;S219-p VKQAPRKSPSDTEGL 0.253185624491412 0.00870438770723535 -0.168333333333333 -0.641666666666667 11.3718202264199 29.2156327555196 -0.168333333333333 -0.641666666666667 0.0729151842170881 0.0011979445731336 -2.22138206033585 -6.18751111207918 O95297 MPZL1 O95297.S219.p_MPZL1 O95297_S219s _1_1_219_219 O95297 O95297|O95297-2|O95297-4 Myelin protein zero-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.10205.10205.3 11.57 11.57 1.139 3 1 1 0 794.1125 2300.3541 S219s TMT10 214 (K) QAPRKsPSDTEGLVK (S) QAPRKS(0.99)PS(0.0)DT(0.0)EGLVK K:TMT10,s:Phosphorylated S MPZL1 29252.8 6 2 2618.1 76.62 HUMAN 1 -11.3718 -29.2156 VKQEDRQTPRSPDST-p O75044;T203-p VKQEDRQTPRSPDST 0.805820854027357 0.341396096569795 0.0706666666666667 -0.423333333333333 1.80857462171502 6.18132550297749 0.0706666666666667 -0.423333333333334 0.659390275235019 0.240917001768444 0.465979443209761 -1.31647951204188 O75044 SRGAP2 O75044.T203.p_SRGAP2 O75044_T203t _1_1_203_203 O75044 O75044 SLIT-ROBO Rho GTPase-activating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.7034.7034.3 9.67 5.45 9.009 4 1 1 0 746.3755 2157.1461 T203t Hydrogen 202 (R) QtPRSPDSTANVRIEEK (H) QT(0.99)PRS(0.0)PDS(0.0)T(0.0)ANVRIEEK K:TMT10-Lys-Only,t:Phosphorylated T SRGAP2 122066.6 3 1 489.1 294.64 HUMAN 1 1.8086 -6.1813 VKQEKADTQDEWTPG-p Q9UIS9-12;T505-p VKQEKADTQDEWTPG 0.121424171475698 0.0292617417043628 0.309666666666667 0.566 19.0396367659696 20.7609025619826 0.309666666666667 0.566 0.01247487846927 0.00839285545908977 3.67580990546621 4.04021915940901 Q9UIS9 MBD1 Q9UIS9.12.T505.p_MBD1 Q9UIS9-12_T505t _1_1_505_505 Q9UIS9-12 Q9UIS9-12|Q9UIS9-9|Q9UIS9-10|A0A0A0MS90|Q9UIS9-5 Isoform 12 of Methyl-CpG-binding domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.30432.30432.3 12.63 12.63 2.163 6 1 1 0 1088.8782 3184.66 T505t TMT10 503 (K) ADtQDEWTPGTAVLTSPVLVPGCPSK (A) ADT(0.99)QDEWT(0.0)PGT(0.0)AVLT(0.0)S(0.0)PVLVPGCPS(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T MBD1 74521.1 1 7 1033.1 185.84 HUMAN 1 19.0396 20.7609 VKQEPIESDEEEAEP-p P56524;S565-p VKQEPIESDEEEAEP 0.59491935042203 0.922044734343897 0.0763333333333333 0.0153333333333334 4.1605616369517 0.495607481952948 0.0763333333333334 0.0153333333333333 0.383657627032316 0.892152818406742 0.947699343418512 0.1420723457479 P56524 HDAC4 P56524.S565.p_HDAC4 P56524_S565s _1_1_565_565 P56524 P56524|P56524-2 Histone deacetylase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10830.10830.5 22.8 22.8 99 1 1 1 0 842.2131 4127.0682 S565s TMT10 549 (K) EAHAQAGVQVKQEPIEsDEEEAEPPREVEPGQR (Q) EAHAQAGVQVKQEPIES(1.0)DEEEAEPPREVEPGQR K:TMT10,s:Phosphorylated S HDAC4 119836.3 4 5 1282.1 158.68 HUMAN 1 4.1606 0.4956 VKRAMNKSFMESGGT-p Q9Y2Z0;S331-p VKRAMNKSFMESGGT 0.467782337576751 0.00486303194802644 -0.237333333333333 -0.638666666666667 6.0920603801504 33.7869825752675 -0.237333333333333 -0.638666666666667 0.245920063323536 0.000418120770927739 -1.30094681283572 -7.658157396338 Q9Y2Z0 SUGT1 Q9Y2Z0.S331.p_SUGT1 Q9Y2Z0_S331s _1_1_331_331 Q9Y2Z0 Q9Y2Z0|Q9Y2Z0-2 Protein SGT1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28693.28693.3 18.53 18.53 2.379 6 1 1 0 847.4074 2460.2481 S331s TMT10 331 (K) sFMESGGTVLSTNWSDVGK (R) S(0.99)FMES(0.0)GGT(0.0)VLS(0.0)T(0.0)NWS(0.0)DVGK K:TMT10,s:Phosphorylated S SUGT1 41308.6 3 4 3463.1 50.35 HUMAN 1 -6.0921 -33.787 VKRASEDSEEEPSGK-p Q8IY33;S125-p VKRASEDSEEEPSGK 0.137301954068809 0.621593818552212 0.298333333333333 -0.0586666666666667 17.6781013194902 2.80782536786226 0.298333333333333 -0.0586666666666667 0.0170682842969901 0.523862683403422 3.39740972285019 -0.681009531913862 Q8IY33 MICALL2 Q8IY33.S125.p_MICALL2 Q8IY33_S125s _1_1_125_125 Q8IY33 Q8IY33|Q8IY33-2|Q8IY33-4 MICAL-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6425.6425.2 12.37 12.37 3.623 3 1 1 0 901.9072 1722.8434 S125s TMT10 121 (R) ASEDsEEEPSGK (K) AS(0.0)EDS(0.99)EEEPS(0.0)GK K:TMT10,s:Phosphorylated S MICALL2 98299.3 4 12 387.1 332.82 HUMAN 1 17.6781 -2.8078 VKRAVMRSPIKRALG-p Q15751;S2578-p VKRAVMRSPIKRALG 0.113358307049092 0.0811983826975039 0.533333333333333 -0.553666666666667 19.7338265230196 14.4575955692177 0.533333333333333 -0.553666666666667 0.0106320582593481 0.0358294748737623 3.82205810303237 -2.7755967789238 Q15751 HERC1 Q15751.S2578.p_HERC1 Q15751_S2578s _1_1_2578_2578 Q15751 Q15751 Probable E3 ubiquitin-protein ligase HERC1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7289.7289.4 8.41 8.41 99 1 1 1 0 399.7368 1515.9558 S2578s TMT10 2574 (R) AVMRsPIKR (A) AVMRS(1.0)PIKR K:TMT10,s:Phosphorylated S HERC1 539122.1 2 13 269.1 394.57 HUMAN 1 19.7338 -14.4576 VKRAVVVSPKEENKA-p O75909;S340-p VKRAVVVSPKEENKA 0.578418926259303 0.243007598977205 -0.081 0.116333333333333 4.37278313212534 8.09341985367178 -0.081 0.116333333333333 0.36536057895453 0.155116506334728 -0.987749820086841 1.65083297323345 O75909 CCNK O75909.S340.p_CCNK O75909_S340s _1_1_340_340 O75909 O75909|G3V5E1|O75909-1 Cyclin-K HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11466.11466.2 14.6 14.6 99 1 1 1 0 984.0606 1887.1518 S340s TMT10 336 (R) AVVVsPKEENK (A) AVVVS(1.0)PKEENK K:TMT10,s:Phosphorylated S CCNK 64637.9 22 4 1127.1 174.7 HUMAN 1 -4.3728 8.0934 VKRDRSVSVDSGEQR-p Q86UU0;S118-p VKRDRSVSVDSGEQR 0.677921661300825 0.131743739580025 -0.0616666666666667 0.158666666666667 3.15979824228303 11.605317743167 -0.0616666666666667 0.158666666666667 0.483081243749027 0.0690984373018878 -0.752686375210588 2.26143319269698 Q86UU0 BCL9L Q86UU0.S118.p_BCL9L Q86UU0_S118s _1_1_118_118 Q86UU0 Q86UU0|Q86UU0-2|A0A087WZX0|Q86UU0-4|Q86UU0-3 B-cell CLL/lymphoma 9-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.10600.10600.3 16.51 16.51 1.416 6 1 1 0 853.4003 2478.2157 S118s Hydrogen 116 (R) SVsVDSGEQREAGTPSLDSEAK (E) S(0.0)VS(0.99)VDS(0.0)GEQREAGT(0.0)PS(0.0)LDS(0.0)EAK K:TMT10-Lys-Only,s:Phosphorylated S BCL9L 157526.3 3 5 139.1 524.37 HUMAN 1 -3.1598 11.6053 VKRERTSSLTQFPPS-p Q9H6Z4-3;S58-p VKRERTSSLTQFPPS 0.286866398353762 0.0369221560367934 -0.164333333333333 -0.256333333333333 10.2335381959965 19.2612251396801 -0.164333333333333 -0.256333333333333 0.0947646101693569 0.011854342913602 -2.0223148284224 -3.71884747954166 Q9H6Z4 RANBP3 Q9H6Z4.3.S58.p_RANBP3 Q9H6Z4-3_S58s _1_1_58_58 Q9H6Z4-3 Q9H6Z4|Q9H6Z4-2|Q9H6Z4-3|B7Z7F3 Isoform 3 of Ran-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14301.14532.2 12.86 12.86 1.181 6 1 1 0 1001.9707 1922.9657 S58s TMT10 56 (R) TSsLTQFPPSQSEER (S) T(0.0)S(0.0)S(0.99)LT(0.0)QFPPS(0.0)QS(0.0)EER s:Phosphorylated S RANBP3 53752.1 20 6 444.1 311.24 HUMAN 1 -10.2335 -19.2612 VKRNVARTLNSQPVF-p Q5VYS8;T608-p VKRNVARTLNSQPVF 0.295125154480667 0.0579257352109434 -0.173333333333333 -0.255 9.99167642057989 16.4798249897534 -0.173333333333333 -0.255 0.100191841279306 0.0224914523916144 -1.98026439555127 -3.15855721306103 Q5VYS8 ZCCHC6 Q5VYS8.T608.p_ZCCHC6 Q5VYS8_T608tT624tT625t_3_3_608_625 Q5VYS8 Q5VYS8|Q5VYS8-6|Q5VYS8-4 Terminal uridylyltransferase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20467.20467.4 7.67 2.72 1.36 6 3 3 0 888.4268 3308.7888 N604n T608t N610n T624t T625t Hydrogen 603 (K) RnVARtLnSQPVFEYILHCLRttYK (Y) RN(1.0)VART(0.99)LN(1.0)S(0.0)QPVFEY(0.0)ILHCLRT(0.99)T(0.99)Y(0.0)K C:Carbamidomethylation,K:TMT10-Lys-Only,n:Deamidated,t:Phosphorylated T ZCCHC6 173394.2 1 6 2208.1 93.42 HUMAN 1 -9.9917 -16.4798 VKRPNEDSDEDEEKG-p Q12996;S691-p VKRPNEDSDEDEEKG 0.21671898036419 0.158441376662528 0.282333333333333 -0.335666666666667 12.7967893921169 10.5240796331601 0.282333333333333 -0.335666666666667 0.0525195577992313 0.0886323035371206 2.4745131295475 -2.07203868219861 Q12996 CSTF3 Q12996.S691.p_CSTF3 Q12996_S691s _1_1_691_691 Q12996 Q12996 Cleavage stimulation factor subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13486.13486.4 26.12 25.75 25.597 2 1 1 0 826.9034 3224.6224 S691s TMT10 686 (K) RPNEDsDEDEEKGAVVPPVHDIYR (A) RPNEDS(0.99)DEDEEKGAVVPPVHDIY(0.0)R K:TMT10,s:Phosphorylated S CSTF3 83376.5 25 2 2221.1 92.94 HUMAN 1 12.7968 -10.5241 VKRSIFASPESVTGK-p O75940;S201-p VKRSIFASPESVTGK 0.341280214844005 0.00354425123931495 0.266 -0.792333333333333 8.67592758752601 36.5646168963424 0.266 -0.792333333333333 0.135646077978933 0.000220565869531074 1.75226520951324 -8.68844347794614 O75940 SMNDC1 O75940.S201.p_SMNDC1 O75940_S201s _1_1_201_201 O75940 O75940 Survival of motor neuron-related-splicing factor 30 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18627.18627.2 12.64 12.64 2.346 4 1 1 0 766.3844 1451.7943 S201s Hydrogen 197 (R) SIFAsPESVTGK (V) S(0.0)IFAS(0.99)PES(0.0)VT(0.0)GK K:TMT10-Lys-Only,s:Phosphorylated S SMNDC1 26881.8 2 4 3297.1 54.55 HUMAN 1 8.6759 -36.5646 VKRVLEKSPGKLLVK-p P51608-2;S228-p VKRVLEKSPGKLLVK 0.262394171681466 0.00275466353441747 -0.241 -1.26433333333333 11.0191736512457 38.7620914822044 -0.241 -1.26433333333333 0.0790829087766337 0.000132981384989982 -2.15946874762557 -9.58827081896433 P51608 MECP2 P51608.2.S228.p_MECP2 P51608-2_S228s _1_1_228_228 P51608-2 P51608-2|A0A087X1U4|I6LM39 Isoform B of Methyl-CpG-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7790.7790.4 9.95 7.54 99 1 1 1 0 446.0219 1701.099 S228s TMT10 223 (K) RVLEKsPGK (L) RVLEKS(1.0)PGK K:TMT10,s:Phosphorylated S MECP2 53493.6 3 3 1786.1 114.94 HUMAN 1 -11.0192 -38.7621 VKSEKMESPVSTPAV-p O15014;S252-p VKSEKMESPVSTPAV 0.240412490822171 0.208732140692284 0.176666666666667 0.165333333333333 11.8359158730018 8.9519018308986 0.176666666666667 0.165333333333333 0.0655252086753172 0.127294551987379 2.30326403895212 1.79939320599902 O15014 ZNF609 O15014.S252.p_ZNF609 O15014_S252s _1_1_252_252 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.36616.36616.4 29.18 29.18 1.189 5 1 1 0 1013.5211 3971.1006 S252s TMT10 250 (K) MEsPVSTPAVLPIHLLVPVVNNDISSPCEQIMVR (T) MES(0.99)PVS(0.0)T(0.0)PAVLPIHLLVPVVNNDIS(0.0)S(0.0)PCEQIMVR C:Carbamidomethylation,s:Phosphorylated S ZNF609 152443.5 19 2 63.1 699.07 HUMAN 1 11.8359 8.9519 VKSKLPNTVLGKIWK-p Q9H4M9;T479-p VKSKLPNTVLGKIWK 0.134264480831341 0.0574625279745625 -0.262333333333333 0.467 17.9230054746784 16.5296142738202 -0.262333333333333 0.467 0.0161324174887615 0.022235073665466 -3.4466998387084 3.16822281235836 Q9H4M9 EHD1 Q9H4M9.T479.p_EHD1 Q9H4M9_T479t _1_1_479_479 Q9H4M9 A0A024R571|Q9H4M9 EH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.16456.16456.3 12.48 12.48 4.964 2 1 1 0 608.7039 1744.13 T479t TMT10 474 (K) SKLPNtVLGK (I) S(0.0)KLPNT(0.99)VLGK K:TMT10,t:Phosphorylated T EHD1 60682.8 1 9 1572.1 130.65 HUMAN 1 -17.923 16.5296 VKSPRPASPASNVVV-p Q7Z589-4;S188-p VKSPRPASPASNVVV 0.175114346915946 0.00676457338427371 0.214 0.603666666666667 15.0737701184332 31.1496943340883 0.214 0.603666666666667 0.0310901622255295 0.000767415499834788 2.89229830538228 6.77840176598793 Q7Z589 C11orf30 Q7Z589.4.S188.p_C11orf30 Q7Z589-4_S188s _1_1_188_188 Q7Z589-4 Q7Z589-7|Q7Z589-4|Q7Z589-5|Q7Z589-6|E9PMC9|Q7Z589-2 Isoform 4 of BRCA2-interacting transcriptional repressor EMSY HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22894.22894.3 20.78 20.78 1.117 6 1 1 0 761.0733 2201.2379 S188s Hydrogen 186 (R) PAsPASNVVVLPSGSTVYVK (S) PAS(0.99)PAS(0.0)NVVVLPS(0.0)GS(0.0)T(0.0)VY(0.0)VK K:TMT10-Lys-Only,s:Phosphorylated S EMSY 142030.9 11 1 879.1 207.7 HUMAN 1 15.0738 31.1497 VKSQRPFSPREALRS-p Q86V48;S745-p VKSQRPFSPREALRS 0.214718677142886 0.568849693698469 0.223666666666667 -0.0916666666666666 12.8803631726813 3.30083119409894 0.223666666666667 -0.0916666666666666 0.0515185561108985 0.467645630251761 2.48953119277085 -0.780763302467827 Q86V48 LUZP1 Q86V48.S745.p_LUZP1 Q86V48_S745s _1_1_745_745 Q86V48 Q86V48|Q86V48-3|Q86V48-2 Leucine zipper protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5360.5360.3 8.29 4.51 3.977 2 1 1 0 428.5538 1203.6796 S745s TMT10 740 (K) SQRPFsPR (E) S(0.0)QRPFS(0.99)PR s:Phosphorylated S LUZP1 120843.3 3 13 507.1 289.34 HUMAN 1 12.8804 -3.3008 VKSTAGDTHLGGEDF-p P11142;T226-p VKSTAGDTHLGGEDF 0.705418537218956 0.0493435924793765 0.061 0.351 2.84836223160342 17.4798567951419 0.061 0.351 0.518995720562931 0.0178654648370958 0.689440999190175 3.35510531642159 P11142 HSPA8 P11142.T226.p_HSPA8 P11142_T226t _1_1_226_226 P11142 P11142|P54652|E9PKE3|P11142-2 Heat shock cognate 71 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8817.8817.3 13.3 13.3 3.317 3 1 1 0 667.6227 1920.8885 T226t TMT10 221 (K) STAGDtHLGGEDFDNR (M) S(0.0)T(0.0)AGDT(0.99)HLGGEDFDNR t:Phosphorylated T HSPA8 71125 1 14 367.1 341.38 HUMAN 1 2.8484 17.4799 VKSTDRKSAVEAQNE-p Q32MZ4-2;S594-p VKSTDRKSAVEAQNE 0.224039953760848 0.0113886111056145 -0.304666666666667 -0.414333333333333 12.4820686729722 27.2057938473567 -0.304666666666667 -0.414333333333333 0.0564667942713655 0.00190292037076209 -2.41814374108714 -5.61718714374659 Q32MZ4 LRRFIP1 Q32MZ4.2.S594.p_LRRFIP1 Q32MZ4-2_S594s _1_1_594_594 Q32MZ4-2 Q32MZ4|Q32MZ4-2|Q32MZ4-3 Isoform 2 of Leucine-rich repeat flightless-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8298.8298.3 9.5 9.5 1.15 4 1 1 0 957.5008 2790.5201 S594s TMT10 589 (K) STDRKsAVEAQNEVTENPK (Q) S(0.0)T(0.0)DRKS(0.99)AVEAQNEVT(0.0)ENPK K:TMT10,s:Phosphorylated S LRRFIP1 87029.9 1 12 235.1 419.93 HUMAN 1 -12.4821 -27.2058 VKSTIFISPSSVKKE-p P28290;S803-p VKSTIFISPSSVKKE 0.593368117975199 0.270791951447825 -0.104 -0.148333333333333 4.18171951733627 7.47083320934166 -0.104 -0.148333333333333 0.381793076242115 0.179026235291377 -0.951709942506428 -1.54274868950031 P28290 SSFA2 P28290.S803.p_SSFA2 P28290_S803s _1_1_803_803 P28290 P28290|P28290-3|E9PHV5|P28290-2 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.18806.18806.4 13.76 7.8 2 6 1 1 0 789.6823 3075.7293 S803s TMT10 798 (K) STIFIsPSSVKKEEAPQSEAPR (V) S(0.0)T(0.0)IFIS(0.99)PS(0.0)S(0.0)VKKEEAPQS(0.0)EAPR K:TMT10,s:Phosphorylated S SSFA2 139638.7 5 22 73.1 652.35 HUMAN 1 -4.1817 -7.4708 VKSTNGDTFLGGEDF-p P38646;T271-p VKSTNGDTFLGGEDF 0.849433782084823 0.266359214588542 0.0336666666666667 -0.117666666666667 1.37224317797047 7.56528431689826 0.0336666666666667 -0.117666666666667 0.729080834847855 0.175174774986172 0.364810646600042 -1.55917838186484 P38646 HSPA9 P38646.T271.p_HSPA9 P38646_T271t _1_1_271_271 P38646 P38646 Stress-70 protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28620.28620.3 18.1 16.68 2.974 3 1 1 0 789.0365 2285.1247 T271t TMT10 266 (K) STNGDtFLGGEDFDQALLR (H) S(0.0)T(0.0)NGDT(0.99)FLGGEDFDQALLR t:Phosphorylated T HSPA9 73964.5 1 28 367.2 341.38 HUMAN 1 1.3722 -7.5653 VKSWAQASVTHGAHG-p P48634;S146-p VKSWAQASVTHGAHG 0.102231937186315 0.712278201326522 0.441333333333333 0.041 20.9520133507168 2.02704059378648 0.441333333333333 0.041 0.00803153700931104 0.627041002710599 4.08630726515536 0.514722020809313 P48634 PRRC2A P48634.S146.p_PRRC2A P48634_S146s _1_1_146_146 P48634 P48634|P48634-3|P48634-2|P48634-4 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6377.6377.3 11.61 11.61 1.196 3 1 1 0 668.3079 1922.9419 S146s TMT10 141 (K) SWAQAsVTHGAHGDGGR (A) S(0.0)WAQAS(0.99)VT(0.0)HGAHGDGGR s:Phosphorylated S PRRC2A 229315.4 1 3 36.1 882.05 HUMAN 1 20.952 2.027 VKTGLLFSPDVDEKL-p Q6P4F7;S484-p VKTGLLFSPDVDEKL 0.187852033314561 0.00316236615140963 0.262 -0.801 14.2564230911699 37.5264753188622 0.262 -0.801 0.0375281962359858 0.000176747169725879 2.74012089135549 -9.07256614872116 Q6P4F7 ARHGAP11A Q6P4F7.S484.p_ARHGAP11A Q6P4F7_S484s _1_1_484_484 Q6P4F7 Q6P4F7|Q6P4F7-3|Q6P4F7-2|H3BR51 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27709.27709.4 16.47 16.47 4.645 2 1 1 0 607.3457 2346.3888 S484s TMT10 479 (K) TGLLFsPDVDEKLPK (K) T(0.0)GLLFS(0.99)PDVDEKLPK K:TMT10,s:Phosphorylated S ARHGAP11A 114948.2 2 4 414.1 321.53 HUMAN 1 14.2564 -37.5265 VKTHTRVSVQRTQAP-p P15880;S281-p VKTHTRVSVQRTQAP 0.0658438295661245 0.0104208457386963 -0.493 -0.513 25.5092211283381 27.8270640498458 -0.493 -0.513 0.00281240516705647 0.00164927697133721 -5.17391378488156 -5.78898328883096 P15880 RPS2 P15880.S281.p_RPS2 P15880_S281s _1_1_281_281 P15880 P15880|E9PQD7 40S ribosomal protein S2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3090.3090.3 7.89 7.89 7.892 3 1 1 0 464.915 1312.7647 S281s TMT10 276 (K) THTRVsVQR (T) T(0.0)HT(0.0)RVS(0.99)VQR s:Phosphorylated S RPS2 31609.1 1 6 1346.1 151.14 HUMAN 1 -25.5092 -27.8271 VKTKKDDSHSAEDSE-p Q9H1E3;S73-p VKTKKDDSHSAEDSE 0.818819849667573 0.00752314179680432 0.0386666666666667 0.499 1.67310486348654 30.3484630711694 0.0386666666666667 0.499 0.68028283615441 0.000922897974603346 0.435126913890865 6.52834241018192 Q9H1E3 NUCKS1 Q9H1E3.S73.p_NUCKS1 Q9H1E3_S73sS75sS79s_3_3_73_79 Q9H1E3 Q9H1E3|Q9H1E3-2 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6139.6139.5 8.43 8.43 99 3 3 3 0 652.2886 3017.5106 S73s S75s S79s TMT10 70 (K) KDDsHsAEDsEDEKEDHK (N) KDDS(1.0)HS(1.0)AEDS(1.0)EDEKEDHK K:TMT10,s:Phosphorylated S NUCKS1 27295.9 34 30 48.1 767.83 HUMAN 1 1.6731 30.3485 VKTRKSKSMDLGIAD-p Q8TEW0;S852-p VKTRKSKSMDLGIAD 0.340030512994892 0.0844865120953694 -0.241333333333333 0.201333333333333 8.71533953542775 14.2079394641804 -0.241333333333333 0.201333333333333 0.134420667124696 0.0379494995908855 -1.75908774478851 2.72951008433061 Q8TEW0 PARD3 Q8TEW0.S852.p_PARD3 Q8TEW0_S852s _1_1_852_852 Q8TEW0 Q8TEW0|Q8TEW0-2|Q8TEW0-11|Q8TEW0-4|Q5VWV2|Q8TEW0-8 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20090.20090.3 15.7 15.7 11.707 2 1 1 0 573.2888 1637.882 S852s TMT10 852 (K) sMDLGIADETK (L) S(0.99)MDLGIADET(0.0)K K:TMT10,s:Phosphorylated S PARD3 151933.9 15 16 65.1 692.2 HUMAN 1 -8.7153 14.2079 VKTRKSKSMDLVADE-p F5GZI3;S566-p VKTRKSKSMDLVADE 0.268803950310253 0.811769649464089 -0.234333333333333 0.0246666666666667 10.8188785847549 1.26989226347779 -0.234333333333333 0.0246666666666667 0.0828155978735483 0.74646727598146 -2.12440773301912 0.340237209550505 F5GZI3 NotFound F5GZI3.S566.p_NotFound F5GZI3_S566s _1_1_566_566 F5GZI3 F5GZI3 Partitioning defective 3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15412.15412.2 12.29 7.93 1.1 3 1 1 0 1046.0559 2011.1349 S566s TMT10 564 (K) SKsMDLVADETK (L) S(0.0)KS(0.99)MDLVADET(0.0)K K:TMT10,s:Phosphorylated S PARD3 82290.9 6 1 65.3 692.2 HUMAN 1 -10.8189 1.2699 VKVDGPRSPSYGRSR-p J3KTL2;S199-p VKVDGPRSPSYGRSR 0.387370777933455 0.148943828729514 0.231 0.231 7.61608015602775 10.8851605913547 0.231 0.231 0.173137835722455 0.0815612627238088 1.56848082059043 2.1350513525484 J3KTL2 NotFound J3KTL2.S199.p_NotFound J3KTL2_S199s _1_1_199_199 J3KTL2 J3KTL2|Q07955 Serine/arginine-rich-splicing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.5239.5239.3 13.25 8.95 2.487 3 1 1 0 500.5781 1419.7542 S199s TMT10 194 (K) VDGPRsPSYGR (S) VDGPRS(0.99)PS(0.0)Y(0.0)GR s:Phosphorylated S SRSF1 28442.8 12 89 8.5 1346.57 HUMAN 1 7.6161 10.8852 VKVIYINSPLPQKKM-p Q659A1;S326-p VKVIYINSPLPQKKM 0.595852428063565 0.0761209066341781 0.0846666666666667 -0.233333333333333 4.14899421994887 14.8441729604056 0.0846666666666667 -0.233333333333333 0.384680859745598 0.0327780190995814 0.945504965083842 -2.84744201214724 Q659A1 ICE2 Q659A1.S326.p_ICE2 Q659A1_S326s _1_1_326_326 Q659A1 Q659A1|H0YNU9 Little elongation complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20695.20695.3 14.14 13.09 6.221 2 1 1 0 723.1026 2087.3196 S326s TMT10 321 (K) VIYINsPLPQKK (M) VIY(0.0)INS(0.99)PLPQKK K:TMT10,s:Phosphorylated S ICE2 111036.5 3 3 1160.1 171.12 HUMAN 1 4.149 -14.8442 VKVQKAFSESGSNLH-p Q6P4F7;S604-p VKVQKAFSESGSNLH 0.588938726682811 0.629016847859228 0.133333333333333 0.14 4.23396532906891 2.73701119677141 0.133333333333333 0.14 0.377227605685274 0.532474580810877 0.961596344653296 0.66638174393978 Q6P4F7 ARHGAP11A Q6P4F7.S604.p_ARHGAP11A Q6P4F7_S604sS606sS608s_3_3_604_608 Q6P4F7 Q6P4F7|Q6P4F7-3 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.40262.40857.4 7 7 3.08 6 3 3 0 901.92 3347.7894 S604s S606s S608s N609n M614m Hydrogen 602 (K) AFsEsGsnLHALmNQRQSSVTNVGKVK (L) AFS(0.99)ES(0.99)GS(0.99)N(0.99)LHALM(1.0)N(0.0)QRQS(0.0)S(0.0)VT(0.0)N(0.0)VGKVK K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated,m:Oxidized methionine ARHGAP11A 114948.2 1 24 414.1 321.53 HUMAN 1 4.234 2.737 VKVSYKGSPAARRAF-p A0A0A0MT49;S901-p VKVSYKGSPAARRAF 0.419598745385739 0.655909228224513 0.143333333333333 -0.0536666666666666 6.96240720729748 2.50404382359543 0.143333333333333 -0.0536666666666666 0.201260839213524 0.561817958937822 1.45443117588738 -0.617664543592871 A0A0A0MT49 NotFound A0A0A0MT49.S901.p_NotFound A0A0A0MT49_S901s _1_1_901_901 A0A0A0MT49 A0A0A0MT49|Q9HBD4|P51532|P51532-4|P51532-3|P51532-2|P51532-5 Transcription activator BRG1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7551.7551.3 8.41 8.41 2.2 3 1 1 0 525.289 1493.884 S901s TMT10 896 (K) VSYKGsPAAR (R) VS(0.0)Y(0.0)KGS(0.99)PAAR K:TMT10,s:Phosphorylated S SMARCA4 189484.7 2 7 392.1 331.85 HUMAN 1 6.9624 -2.504 VKYRAQVYVPLKELL-p O14777;Y458-p VKYRAQVYVPLKELL 0.232987845222992 0.173029524473013 0.197333333333333 0.151333333333333 12.1611984970414 10.016834190247 0.197333333333333 0.151333333333333 0.060796720097927 0.0996131287274654 2.36095973212476 1.98383152089174 O14777 NDC80 O14777.Y458.p_NDC80 O14777_Y458y _1_1_458_458 O14777 O14777 Kinetochore protein NDC80 homolog GG20160819_MSz_CCLE_T4D7_pY_Injection_02.17998.17998.2 12.62 8.54 99 1 1 1 0 613.8384 1146.7084 Y458y Hydrogen 455 (R) AQVyVPLK (E) AQVY(1.0)VPLK K:TMT10-Lys-Only,y:Phosphorylated Y NDC80 74424.8 2 1 280.1 12.62 HUMAN 1 12.1612 10.0168 VLAAVLASQPSIPRS-p Q96D71;S733-p VLAAVLASQPSIPRS 0.213941118182198 0.0216268866420139 -0.192333333333333 -0.417666666666667 12.9090334532545 22.7665990641606 -0.192333333333333 -0.417666666666667 0.051179572587777 0.00528859236374687 -2.49468808776809 -4.49449955320226 Q96D71 REPS1 Q96D71.S733.p_REPS1 Q96D71_S733s _1_1_733_733 Q96D71 Q96D71|Q96D71-3|Q96D71-4|E9PMG1|Q96D71-2 RalBP1-associated Eps domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.27592.27592.3 20.68 18.39 5.173 3 1 1 0 630.3538 1809.0796 S733s TMT10 724 (K) TGVLAAVLAsQPSIPR (S) T(0.0)GVLAAVLAS(0.99)QPS(0.0)IPR s:Phosphorylated S REPS1 86831.7 2 34 226.1 425.21 HUMAN 1 -12.909 -22.7666 VLADLGVTPDKITNS-p Q02156;T309-p VLADLGVTPDKITNS 0.84666530857362 0.380283383791456 -0.035 -0.105333333333333 1.39886086418273 5.58136612762807 -0.035 -0.105333333333333 0.724626001445665 0.276607140617881 -0.371138473046523 -1.20934135318806 Q02156 PRKCE Q02156.T309.p_PRKCE Q02156_T309tS316s_2_2_309_316 Q02156 Q02156|E9PBI2 Protein kinase C epsilon type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25214.25214.3 10.05 10.05 2.535 3 2 2 0 834.766 2342.3444 T309t S316s TMT10 302 (K) VLADLGVtPDKITNsGQR (R) VLADLGVT(0.99)PDKIT(0.0)NS(0.99)GQR K:TMT10,t:Phosphorylated T,s:Phosphorylated S PRKCE 85041.6 1 8 1089.1 179.15 HUMAN 1 -1.3989 -5.5814 VLADQGKSFATASHR-p Q9NYF8;S422-p VLADQGKSFATASHR 0.144515890889882 0.321605891337623 0.307666666666667 0.237333333333333 17.1511993875579 6.51319815188544 0.307666666666667 0.237333333333333 0.0192699266369357 0.223192802195106 3.29247438707964 1.37514828277658 Q9NYF8 BCLAF1 Q9NYF8.S422.p_BCLAF1 Q9NYF8_S422s _1_1_422_422 Q9NYF8 Q9NYF8|Q9NYF8-2|E9PK91|Q9NYF8-3|E9PKI6|E9PQN2|A0A1W2PQ43 Bcl-2-associated transcription factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4885.4885.3 7.62 7.62 3.554 3 1 1 0 395.8587 1105.5952 S422s TMT10 422 (K) sFATASHR (N) S(0.99)FAT(0.0)AS(0.0)HR s:Phosphorylated S BCLAF1 106234.3 1 20 10.1 1293.04 HUMAN 1 17.1512 6.5132 VLAGETLSVNDPPDV-p Q12906-7;S190-p VLAGETLSVNDPPDV 0.761549333125081 0.752117382006702 0.0453333333333333 0.0440000000000001 2.26484540046585 1.70942342827452 0.0453333333333333 0.0440000000000001 0.593629479753335 0.674617584351844 0.56668669354283 0.443396024268532 Q12906 ILF3 Q12906.7.S190.p_ILF3 Q12906-7_S190s _1_1_190_190 Q12906-7 Q12906-7|Q12906-3|Q12906-6|Q12906-2|Q12906-4 Isoform 7 of Interleukin enhancer-binding factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22823.22823.4 18.37 15.06 1.111 2 1 1 0 676.8642 2624.466 S190s TMT10 183 (K) VLAGETLsVNDPPDVLDRQK (C) VLAGET(0.0)LS(0.99)VNDPPDVLDRQK K:TMT10,s:Phosphorylated S ILF3 96205.6 6 6 130.1 537.24 HUMAN 1 2.2648 1.7094 VLALVLPSIVILGKI-p Q8NFT2;S440-p VLALVLPSIVILGKI 0.137831886053651 0.614876406667893 -0.374333333333333 -0.0493333333333333 17.6196012760936 2.86962148094317 -0.374333333333334 -0.0493333333333333 0.0172997518020575 0.516461380655794 -3.38568494939336 -0.693709253895121 Q8NFT2 STEAP2 Q8NFT2.S440.p_STEAP2 Q8NFT2_S440s _1_1_440_440 Q8NFT2 Q8NFT2 Metalloreductase STEAP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24388.24388.5 9.71 5.2 1.121 6 1 1 0 1085.6104 5344.0504 S440s Hydrogen 417 (K) RAFEEEYYRFYTPPNFVLALVLPsIVILGKIILFLPCISRK (L) RAFEEEY(0.0)Y(0.0)RFY(0.0)T(0.0)PPNFVLALVLPS(0.99)IVILGKIILFLPCIS(0.0)RK K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S STEAP2 56339.8 1 4 3910.1 40.91 HUMAN 1 -17.6196 -2.8696 VLAMRKQSEGLTKEY-p P51572-2;S283-p VLAMRKQSEGLTKEY 0.195560930686114 0.0344283897165834 0.228 0.654666666666667 13.8210798876081 19.7139457188968 0.228 0.654666666666667 0.0414850875764735 0.0106808404615727 2.66012686334015 3.81432297154987 P51572 BCAP31 P51572.2.S283.p_BCAP31 P51572-2_S283s _1_1_283_283 P51572-2 P51572-2 Isoform 2 of B-cell receptor-associated protein 31 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7758.7758.3 11.36 11.36 3.2 2 1 1 0 553.3217 1577.983 S283s TMT10 281 (R) KQsEGLTK (E) KQS(0.99)EGLT(0.0)K K:TMT10,s:Phosphorylated S BCAP31 34922.6 1 2 5149.1 22.42 HUMAN 1 13.8211 19.7139 VLANFFNSLLSKKTG-p Q9Y6G9;S450-p VLANFFNSLLSKKTG 0.792284451558151 0.314902734477293 0.0436666666666667 -0.137333333333333 1.95048296743669 6.6328917965449 0.0436666666666667 -0.137333333333333 0.638192510538561 0.217125494395098 0.497807999061713 -1.39622143315185 Q9Y6G9 DYNC1LI1 Q9Y6G9.S450.p_DYNC1LI1 Q9Y6G9_S450s _1_1_450_450 Q9Y6G9 Q9Y6G9|E9PHI6 Cytoplasmic dynein 1 light intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37497.37497.3 23.64 21.2 4.699 4 1 1 0 822.1021 2384.3226 S450s TMT10 436 (K) AGATSEGVLANFFNsLLSK (K) AGAT(0.0)S(0.0)EGVLANFFNS(0.99)LLS(0.0)K K:TMT10,s:Phosphorylated S DYNC1LI1 56863.4 1 13 510.1 287.75 HUMAN 1 1.9505 -6.6329 VLARNLYSLDLSDLP-p Q6GYQ0-2;S679-p VLARNLYSLDLSDLP 0.206626295086053 0.711820195826327 -0.360666666666667 0.0563333333333334 13.2429511777863 2.03075554523588 -0.360666666666667 0.0563333333333333 0.0473919831272605 0.62650486168925 -2.55493898804713 0.515542157524138 Q6GYQ0 RALGAPA1 Q6GYQ0.2.S679.p_RALGAPA1 Q6GYQ0-2_S679s _1_1_679_679 Q6GYQ0-2 A0A1B0GUI1|Q6GYQ0-2|Q6GYQ0-6|Q6GYQ0-5|Q6GYQ0-7|Q6GYQ0-4|Q6GYQ0-3 Isoform 2 of Ral GTPase-activating protein subunit alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.33766.33766.3 15.06 12.79 1.397 3 1 1 0 715.3828 2064.1629 S679s TMT10 676 (R) NLYsLDLSDLPLDK (L) NLY(0.0)S(0.99)LDLS(0.0)DLPLDK K:TMT10,s:Phosphorylated S RALGAPA1 236609.9 1 4 317.1 366.49 HUMAN 1 -13.243 2.0308 VLARTVGSTSTPRSR-p Q99640;S452-p VLARTVGSTSTPRSR 0.414715625274144 0.00190027809892951 0.109333333333333 -0.947 7.0528965114939 42.6880198065371 0.109333333333333 -0.947 0.197110767442132 5.38515266026445e-05 1.47026932758528 -11.4090569926697 Q99640 PKMYT1 Q99640.S452.p_PKMYT1 Q99640_S452s _1_1_452_452 Q99640 B4DZM6|Q99640 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5227.5227.2 9.3 4.51 1.127 5 1 1 0 607.8037 1134.6316 S452s TMT10 449 (R) TVGsTSTPR (S) T(0.0)VGS(0.99)T(0.0)S(0.0)T(0.0)PR s:Phosphorylated S PKMYT1 55090.9 1 9 926.1 199.78 HUMAN 1 7.0529 -42.688 VLAYVQASPVRTLSP-p Q96CN5;S661-p VLAYVQASPVRTLSP 0.734788762117455 0.031716915623897 -0.064 -0.709666666666667 2.53388338570454 20.2386502806702 -0.064 -0.709666666666667 0.557971043603589 0.00946531282778999 -0.624037505332557 -3.92662510354195 Q96CN5 LRRC45 Q96CN5.S661.p_LRRC45 Q96CN5_S661s _1_1_661_661 Q96CN5 Q96CN5 Leucine-rich repeat-containing protein 45 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.33218.33218.3 24.67 24.67 4.891 3 1 1 0 748.3976 2163.2124 S661s TMT10 647 (R) ASFLQNAVLAYVQAsPVR (T) AS(0.0)FLQNAVLAY(0.0)VQAS(0.99)PVR s:Phosphorylated S LRRC45 76520.4 4 4 1795.1 114.28 HUMAN 1 -2.5339 -20.2387 VLDAVPRTPSRERSS-p Q9UQ35;T1413-p VLDAVPRTPSRERSS 0.720781688292823 0.261823729556559 0.0563333333333333 -0.117666666666667 2.68607300718997 7.66688126974292 0.0563333333333333 -0.117666666666667 0.538756718825066 0.171124374235863 0.655895632823775 -1.57683630199635 Q9UQ35 SRRM2 Q9UQ35.T1413.p_SRRM2 Q9UQ35_T1413t _1_1_1413_1413 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17651.17651.4 15.94 15.94 1.495 7 1 1 0 667.3358 2586.3507 T1413t TMT10 1394 (K) AGMSSNQSISSPVLDAVPRtPSR (E) AGMS(0.0)S(0.0)NQS(0.0)IS(0.0)S(0.0)PVLDAVPRT(0.99)PS(0.0)R t:Phosphorylated T SRRM2 300351.7 8 82 2.1 3310.34 HUMAN 1 2.6861 -7.6669 VLDIEQFSTVKGVEL-p P43250;S484-p VLDIEQFSTVKGVEL 0.334991410736759 0.795578686697665 -0.145666666666667 -0.0333333333333333 8.86218511206859 1.38697182556074 -0.145666666666667 -0.0333333333333333 0.129951557441155 0.726612420752714 -1.78450670430854 -0.368276348944059 P43250 GRK6 P43250.S484.p_GRK6 P43250_S484s _1_1_484_484 P43250 P34947|P43250-2|P43250-3 G protein-coupled receptor kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26905.26905.3 15.05 11.69 1.645 2 1 1 0 644.6761 1852.0468 S484s TMT10 476 (K) DVLDIEQFsTVK (G) DVLDIEQFS(0.99)T(0.0)VK K:TMT10,s:Phosphorylated S GRK6 67245 6 2 3249.1 55.9 HUMAN 1 -8.8622 -1.387 VLDKANKTPLRPLDP-p Q04637-9;T654-p VLDKANKTPLRPLDP 0.858494501092491 0.00182687357791697 -0.026 -0.817666666666667 1.29156183032276 43.1099312671941 -0.026 -0.817666666666667 0.742751977887423 4.88660092969426e-05 -0.345495212394709 -11.6226520313875 Q04637 EIF4G1 Q04637.9.T654.p_EIF4G1 Q04637-9_T654t _1_1_654_654 Q04637-9 Q04637-9|Q04637-8|E7EUU4|Q04637-3|E9PGM1|Q04637-4|E7EX73|Q04637-5|Q04637-7|Q04637-6 Isoform 9 of Eukaryotic translation initiation factor 4 gamma 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.24863.24863.5 21.71 19.37 4.092 4 1 1 0 813.2314 3982.1485 T654t TMT10 651 (K) ANKtPLRPLDPTRLQGINCGPDFTPSFANLGR (T) ANKT(0.99)PLRPLDPT(0.0)RLQGINCGPDFT(0.0)PS(0.0)FANLGR K:TMT10,C:Carbamidomethylation,t:Phosphorylated T EIF4G1 176975.4 5 10 107.1 585.61 HUMAN 1 -1.2916 -43.1099 VLDRNCPSPVLIDCP-p O15014;S491-p VLDRNCPSPVLIDCP 0.977130047691108 0.482385036803986 -0.00500000000000001 0.066 0.197977530310721 4.2258381518832 -0.00500000000000001 0.066 0.955437420905791 0.377934192137494 -0.0585165086231993 0.959890637277131 O15014 ZNF609 O15014.S491.p_ZNF609 O15014_S491s _1_1_491_491 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16474.16474.5 24.07 16.14 1.154 2 1 1 0 766.1932 3746.9748 S491s TMT10 480 (K) VEPTVLDRNCPsPVLIDCPHPNCNKK (Y) VEPT(0.0)VLDRNCPS(0.99)PVLIDCPHPNCNKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF609 152443.5 13 12 63.1 699.07 HUMAN 1 -0.198 4.2258 VLDYDHGSRSQESGY-p A8MXP9;S206-p VLDYDHGSRSQESGY 0.485583331546133 0.349742856794242 0.110666666666667 0.19 5.78051232971648 6.04931453486742 0.110666666666667 0.19 0.264209705530012 0.248352505950317 1.24536323630834 1.29303383717043 A8MXP9 NotFound A8MXP9.S206.p_NotFound A8MXP9_S206s _1_1_206_206 A8MXP9 A8MXP9|P43243|D6REM6 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14983.14983.4 16.5 10.09 3.768 4 1 1 0 707.5826 2747.3335 S206s TMT10 186 (R) RDSFDDRGPSLNPVLDYDHGsR (S) RDS(0.0)FDDRGPS(0.0)LNPVLDY(0.0)DHGS(0.99)R s:Phosphorylated S MATR3 100478.9 3 14 92.1 615.57 HUMAN 1 5.7805 6.0493 VLEANDGSGMLDEDE-p F5H211;S219-p VLEANDGSGMLDEDE 0.373420575087408 0.116192151826981 0.185333333333333 -0.496666666666667 7.92687293979497 12.3320445136383 0.185333333333333 -0.496666666666667 0.161180576954963 0.058451484925904 1.62247240470343 -2.39014068502446 F5H211 NotFound F5H211.S219.p_NotFound F5H211_S219s _1_1_219_219 F5H211 F5H211|P54252-1|P54252-4|A0A087X1A8|A0A0A0MS38|P54252-3|D3VVH9|C9JQV6|A0A087WXY4|G3V526 Ataxin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21837.21837.3 18.18 18.18 99 1 1 1 0 848.7081 2464.1347 S219s TMT10 212 (R) VLEANDGsGMLDEDEEDLQR (A) VLEANDGS(1.0)GMLDEDEEDLQR s:Phosphorylated S ATXN3 42705 1 1 3674.1 45.57 HUMAN 1 7.9269 -12.332 VLEDEEGSKDIELSD-p Q15024;S177-p VLEDEEGSKDIELSD 0.670171441411796 0.373957614913318 0.08 0.0863333333333334 3.25543822128886 5.66915029995612 0.08 0.0863333333333334 0.47255915129854 0.271072193456248 0.771833875931868 1.22511673371766 Q15024 EXOSC7 Q15024.S177.p_EXOSC7 Q15024_S177s _1_1_177_177 Q15024 Q15024 Exosome complex component RRP42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22891.22891.4 19.09 17.62 4.214 3 1 1 0 784.6178 3055.4818 S177s TMT10 170 (R) VLEDEEGsKDIELSDDPYDCIR (L) VLEDEEGS(0.99)KDIELS(0.0)DDPY(0.0)DCIR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S EXOSC7 32448.4 2 2 5050.1 23.52 HUMAN 1 3.2554 5.6692 VLEDMEDSVLAVMPP-p Q7Z6Z7;S3080-p VLEDMEDSVLAVMPP 0.565463798430317 0.314966338701214 0.083 -0.138 4.56252804786471 6.63122838050513 0.083 -0.138 0.349741521637614 0.217208672796114 1.02324195266855 -1.39592886206164 Q7Z6Z7 HUWE1 Q7Z6Z7.S3080.p_HUWE1 Q7Z6Z7_S3080s _1_1_3080_3080 Q7Z6Z7 Q7Z6Z7 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.35720.35720.3 10.32 10.32 5.671 2 1 1 0 1079.2039 3155.6278 S3080s TMT10 3072 (R) SVLEDMEDsVLAVMPPDIAAEAQALRR (E) S(0.0)VLEDMEDS(0.99)VLAVMPPDIAAEAQALRR s:Phosphorylated S HUWE1 485818.9 1 47 11.1 1210.45 HUMAN 1 4.5625 -6.6312 VLEEIKNSKHNTPRK-p P51956;S284-p VLEEIKNSKHNTPRK 0.849148530870681 0.00911063922551688 0.0643333333333333 -0.588666666666667 1.37433352755627 28.86146034922 0.0643333333333333 -0.588666666666667 0.728729997531497 0.00129973245932298 0.365308374255428 -6.08389697283602 P51956 NEK3 P51956.S284.p_NEK3 P51956_S284s _1_1_284_284 P51956 P51956|A0A087WY58|P51956-2|A0A087X203 Serine/threonine-protein kinase Nek3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.37209.37209.4 23.89 23.36 5.122 2 1 1 0 847.6915 3307.7773 S284s TMT10 264 (K) CLPPEIIMEYGEEVLEEIKNsK (H) CLPPEIIMEY(0.0)GEEVLEEIKNS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NEK3 58217.1 2 1 3370.1 52.68 HUMAN 1 1.3743 -28.8615 VLEGKKNTCNGGNSE-p P10243;T421-p VLEGKKNTCNGGNSE 0.991908040895934 0.0767942315442363 -0.00166666666666668 0.206333333333333 0.07398372871069 14.7887515755446 -0.00166666666666668 0.206333333333333 0.983108898593442 0.0331989877765004 -0.0221673958800367 2.83710502395943 P10243 MYBL1 P10243.T421.p_MYBL1 P10243_T421t_1_1_421_421 P10243 P10243|P10243-2 Myb-related protein A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.37384.37384.3 7.12 6.67 1.277 4 1 1 0 981.4901 2859.5602 N420n T421t N426n N436n TMT10 419 (K) KntCNGGnSEAVPLTSPnIAK (F) KN(0.99)T(0.99)CN(0.0)GGN(0.99)S(0.0)EAVPLT(0.0)S(0.0)PN(0.99)IAK K:TMT10,C:Carbamidomethylation,n:Deamidated,t:Phosphorylated T MYBL1 86513 3 2 1622.1 126.88 HUMAN 1 -0.074 14.7888 VLESLDRSKDK____-p Q8WY22;S248-p VLESLDRSKDK____ 0.0241132206334896 0.927091743472871 0.69 0.016 37.5117566344835 0.464434955428557 0.69 0.0160000000000001 0.000177347200177506 0.898579495837661 9.08587365053404 0.133544508745324 Q8WY22 BRI3BP Q8WY22.S248.p_BRI3BP Q8WY22_S248s _1_1_248_248 Q8WY22 Q8WY22 BRI3-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14140.14140.3 7.97 7.97 7.966 2 1 1 0 686.3917 1977.1948 S248s TMT10 241 (R) VLESLDRsKDK (-) VLES(0.0)LDRS(0.99)KDK K:TMT10,s:Phosphorylated S BRI3BP 27949.1 2 1 6886.1 8.88 HUMAN 1 37.5118 0.4644 VLETELHYTGEALKE-p Q5JPF3;Y1533-p VLETELHYTGEALKE 0.402736009061482 0.00767604283467135 -0.122 -0.484 7.29196255579966 30.1909308503472 -0.122 -0.484 0.186553647339898 0.000956988931927371 -1.51202912699996 -6.48006820251397 Q5JPF3 NotFound Q5JPF3.Y1533.p_NotFound Q5JPF3_Y1533y _1_1_1533_1533 Q5JPF3 Q5JPF3 Ankyrin repeat domain-containing protein 36C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10112.10122.4 7.2 7.2 3.201 3 1 1 0 554.5344 2135.1698 Y1533y Hydrogen 1524 (K) FRVLETELHyTGEALK (E) FRVLET(0.0)ELHY(0.99)T(0.0)GEALK K:TMT10-Lys-Only,y:Phosphorylated Y ANKRD36C 201513.2 1 2 4477.1 30.91 HUMAN 1 -7.292 -30.1909 VLFADQATPTSPIRV-p P21333-2;T857-p VLFADQATPTSPIRV 0.425266233604415 0.0110924398549569 0.126 0.389666666666667 6.84209569106268 27.380134289117 0.126 0.389666666666667 0.206914264161679 0.00182804368994254 1.43334359543192 5.66500262891323 P21333 FLNA P21333.2.T857.p_FLNA P21333-2_T857t _1_1_857_857 P21333-2 P21333|P21333-2|Q60FE5|Q5HY54|A0A087WWY3 Isoform 2 of Filamin-A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.30524.30524.5 10.89 10.89 1.18 6 1 1 0 613.1307 2981.6534 T857t TMT10 842 (R) GAGSYTIMVLFADQAtPTSPIRVK (V) GAGS(0.0)Y(0.0)T(0.0)IMVLFADQAT(0.99)PT(0.0)S(0.0)PIRVK K:TMT10,t:Phosphorylated T FLNA 282751.6 6 3 198.1 454.47 HUMAN 1 6.8421 27.3801 VLGKEQASPKNVKME-p P51587;S2186-p VLGKEQASPKNVKME 0.163367581780767 0.00109316504118219 0.709 -2.02666666666667 15.7589179584376 50.0160584783196 0.709 -2.02666666666667 0.0265526703743207 9.96309226430148e-06 3.02203566258978 -15.703117344254 P51587 BRCA2 P51587.S2186.p_BRCA2 P51587_S2186s _1_1_2186_2186 P51587 P51587 Breast cancer type 2 susceptibility protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21339.21339.5 17.86 19.33 14.26 2 1 1 0 543.9153 2635.575 S2186s TMT10 2171 (K) VSLVENIHVLGKEQAsPK (N) VS(0.0)LVENIHVLGKEQAS(0.99)PK K:TMT10,s:Phosphorylated S BRCA2 388531.4 2 10 876.1 208.99 HUMAN 1 15.7589 -50.0161 VLGKSPLSALARKKA-p Q9BQG0-2;S1293-p VLGKSPLSALARKKA 0.740305109263842 0.0199788967403366 -0.0676666666666667 -0.399 2.47695768062735 23.2996446731882 -0.0676666666666667 -0.399 0.565332863066329 0.00467773411549102 -0.612016068323109 -4.6203604233358 Q9BQG0 MYBBP1A Q9BQG0.2.S1293.p_MYBBP1A Q9BQG0-2_S1293s _1_1_1293_1293 Q9BQG0-2 Q9BQG0-2 Isoform 2 of Myb-binding protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20134.20134.2 9.19 5.88 3.251 2 1 1 0 562.3087 1043.6411 S1293s TMT10 1290 (K) SPLsALAR (K) S(0.0)PLS(0.99)ALAR s:Phosphorylated S MYBBP1A 150334.3 1 11 297.1 378.74 HUMAN 1 -2.477 -23.2996 VLGMSVESAPAVEEE-p Q12888-2;S132-p VLGMSVESAPAVEEE 0.616476954850871 0.00353451070674675 -0.182 0.759333333333333 3.89776503851098 36.612652448223 -0.182 0.759333333333333 0.407589977347931 0.000218139721923735 -0.897536188123398 8.70727846119045 Q12888 TP53BP1 Q12888.2.S132.p_TP53BP1 Q12888-2_S132s _1_1_132_132 Q12888-2 Q12888-2 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23583.23583.4 23.57 23.57 2.263 5 1 1 0 883.4534 3450.8129 S132s TMT10 122 (R) TSSVLGMSVEsAPAVEEEKGEELEQK (E) T(0.0)S(0.0)S(0.0)VLGMS(0.0)VES(0.99)APAVEEEKGEELEQK K:TMT10,s:Phosphorylated S TP53BP1 216167.2 1 7 3.1 2297.07 HUMAN 1 -3.8978 36.6127 VLGNQMMSEKKKKNP-p Q14CB8-2;S438-p VLGNQMMSEKKKKNP 0.864776121014557 0.0215105049882299 -0.0243333333333333 -0.583666666666667 1.22743661118371 22.79817074806 -0.0243333333333333 -0.583666666666667 0.75380035714934 0.00525028556144526 -0.329994196714753 -4.50189165477393 Q14CB8 ARHGAP19 Q14CB8.2.S438.p_ARHGAP19 Q14CB8-2_S438s _1_1_438_438 Q14CB8-2 Q14CB8-2|Q14CB8-3 Isoform 2 of Rho GTPase-activating protein 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.17878.17878.3 10.06 10.06 99 1 1 1 0 558.9498 1594.8697 S438s TMT10 431 (K) VLGNQMMsEK (K) VLGNQMMS(1.0)EK K:TMT10,s:Phosphorylated S ARHGAP19 58444.1 1 2 3437.1 51.09 HUMAN 1 -1.2274 -22.7982 VLGPGAGSQGPEASA-p O94761;S234-p VLGPGAGSQGPEASA 0.254658962170373 0.278453940293124 0.209333333333333 0.226666666666667 11.3047526373631 7.3150962596561 0.209333333333333 0.226666666666667 0.0740499443137237 0.18556256797677 2.20958802620763 1.51562639107969 O94761 RECQL4 O94761.S234.p_RECQL4 O94761_S234s _1_1_234_234 O94761 O94761|A0A087WZ30 ATP-dependent DNA helicase Q4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.29583.29583.4 23.9 18.95 3.288 6 1 1 0 1144.813 4496.2565 S234s TMT10 207 (K) ACRPDLGSEESQLLIPGESAVLGPGAGsQGPEASAFQEVSIR (V) ACRPDLGS(0.0)EES(0.0)QLLIPGES(0.0)AVLGPGAGS(0.99)QGPEAS(0.0)AFQEVS(0.0)IR C:Carbamidomethylation,s:Phosphorylated S RECQL4 135071.6 1 2 2196.1 93.8 HUMAN 1 11.3048 7.3151 VLGQRRPSLAKRQVF-p Q8TC41;S156-p VLGQRRPSLAKRQVF 0.257518332951923 0.276931928483869 -0.355333333333333 0.331333333333333 11.1960999041005 7.34731541070996 -0.355333333333333 0.331333333333334 0.0759259106624341 0.184191022557293 -2.19050059368878 1.52124096692395 Q8TC41 RNF217 Q8TC41.S156.p_RNF217 Q8TC41_S156s _1_1_156_156 Q8TC41 Q8TC41 Probable E3 ubiquitin-protein ligase RNF217 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26703.26703.4 17.1 17.1 99 1 1 1 0 669.13 2593.5554 S156s TMT10 139 (R) VGAADGLVLDVLGQRRPsLAK (R) VGAADGLVLDVLGQRRPS(1.0)LAK K:TMT10,s:Phosphorylated S RNF217 61082.6 1 1 5691.1 17.1 HUMAN 1 -11.1961 7.3473 VLGSAAASPVHLKSP-p O00512;S917-p VLGSAAASPVHLKSP 0.551277990031512 0.270443405119256 0.0906666666666667 0.126666666666667 4.77244595753695 7.47781456220388 0.0906666666666667 0.126666666666667 0.333238679032927 0.178738678958713 1.06218772210797 1.54396356893008 O00512 BCL9 O00512.S917.p_BCL9 O00512_S917s _1_1_917_917 O00512 O00512 B-cell CLL/lymphoma 9 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18975.18975.3 21.5 16.28 3.643 3 1 1 0 690.391 1989.1897 S917s TMT10 907 (K) SPPVLGSAAAsPVHLK (S) S(0.0)PPVLGS(0.0)AAAS(0.99)PVHLK K:TMT10,s:Phosphorylated S BCL9 149515.8 2 12 313.1 369.9 HUMAN 1 4.7724 7.4778 VLHTFSPSPKLQNSA-p Q86YP4-3;S549-p VLHTFSPSPKLQNSA 0.790000475046438 0.878606513430473 0.0373333333333333 0.0253333333333334 1.97582752152159 0.789683375542347 0.0373333333333333 0.0253333333333334 0.634478993378466 0.833741966758569 0.503442192656933 0.220236382320242 Q86YP4 GATAD2A Q86YP4.3.S549.p_GATAD2A Q86YP4-3_S549s _1_1_549_549 Q86YP4-3 Q86YP4-3|Q86YP4-2 Isoform 3 of Transcriptional repressor p66-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15245.15245.3 16.14 16.14 2.186 3 1 1 0 569.9786 1627.9572 S549s TMT10 541 (R) GVLHTFSPsPK (L) GVLHT(0.0)FS(0.0)PS(0.99)PK K:TMT10,s:Phosphorylated S GATAD2A 68475 1 12 1046.1 184.48 HUMAN 1 1.9758 0.7897 VLIASTRSPISFLSK-p Q7RTP6;S649-p VLIASTRSPISFLSK 0.8930597643092 0.0157863944228729 -0.0213333333333333 -0.427666666666667 0.96139791238195 24.9022291219568 -0.0213333333333333 -0.427666666666667 0.80142005979911 0.00323427607240432 -0.264167272602896 -5.01283218870438 Q7RTP6 MICAL3 Q7RTP6.S649.p_MICAL3 Q7RTP6_S649s _1_1_649_649 Q7RTP6 Q7RTP6|Q7RTP6-5|Q7RTP6-3|Q7RTP6-4|Q7RTP6-2 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.27731.27731.3 13.81 13.81 1.183 5 1 1 0 743.4323 2148.3156 S649s TMT10 641 (K) AVLIASTRsPISFLSK (L) AVLIAS(0.0)T(0.0)RS(0.99)PIS(0.0)FLS(0.0)K K:TMT10,s:Phosphorylated S MICAL3 225431.9 3 2 190.1 466.81 HUMAN 1 -0.9614 -24.9022 VLIKPSRSMSDLYDM-p E7EV90;S454-p VLIKPSRSMSDLYDM 0.0779932773626088 0.273024215413764 -0.39 -0.130333333333333 23.6750128992175 7.42673313386376 -0.39 -0.130333333333333 0.00429040914919145 0.180853403668104 -4.7158374678917 -1.53507265644236 E7EV90 SLC45A4 E7EV90.S454.p_SLC45A4 E7EV90_S454s _1_1_454_454 E7EV90 E7EV90|Q5BKX6-3|Q5BKX6-2 Solute carrier family 45 member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20790.20790.3 13 13 1.696 3 1 1 0 585.9409 1675.8436 S454s TMT10 454 (R) sMSDLYDMQK (R) S(0.99)MS(0.0)DLY(0.0)DMQK K:TMT10,s:Phosphorylated S SLC45A4 89416.6 2 4 2550.1 78.93 HUMAN 1 -23.675 -7.4267 VLIKRRLSAQGQAIS-p Q92797;S494-p VLIKRRLSAQGQAIS 0.327394528659194 0.450391065284874 0.201333333333333 0.130333333333333 9.0728469295716 4.61738434352068 0.201333333333333 0.130333333333333 0.123798478461149 0.345351674138491 1.82097391757221 1.03325518797903 Q92797 SYMPK Q92797.S494.p_SYMPK Q92797_S494s _1_1_494_494 Q92797 Q92797|A0A087WUE9|Q92797-2 Symplekin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28813.28813.4 15.92 12.85 3.403 6 1 1 0 877.96 3428.8459 S494s TMT10 492 (R) RLsAQGQAISVVGSLSSMSPLEEEAPQAK (R) RLS(0.99)AQGQAIS(0.0)VVGS(0.0)LS(0.0)S(0.0)MS(0.0)PLEEEAPQAK K:TMT10,s:Phosphorylated S SYMPK 142001.7 3 2 808.1 221.39 HUMAN 1 9.0728 4.6174 VLIRHGESAWNLENR-p P18669;S14-p VLIRHGESAWNLENR 0.270299862417456 0.00717151567768709 0.193666666666667 0.469333333333333 10.766129694508 30.6860688744453 0.193666666666667 0.469333333333333 0.0838275996420315 0.000853872668603054 2.11518580718758 6.63277672197408 P18669 PGAM1 P18669.S14.p_PGAM1 P18669_S14s _1_1_14_14 P18669 P18669 Phosphoglycerate mutase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8451.8451.2 17.3 17.3 99 1 1 1 0 696.7888 1312.6029 S14s Hydrogen 11 (R) HGEsAWNLENR (F) HGES(1.0)AWNLENR s:Phosphorylated S PGAM1 28917.5 5 1 1193.1 167.89 HUMAN 1 10.7661 30.6861 VLIVYELTPTAEQKA-p P49792;T2639-p VLIVYELTPTAEQKA 0.592837281452275 0.0511952944975014 -0.0703333333333333 0.244666666666667 4.18701105279091 17.2294598971532 -0.0703333333333333 0.244666666666667 0.381328174795659 0.0189257897133175 -0.952712355863319 3.30540510417618 P49792 RANBP2 P49792.T2639.p_RANBP2 P49792_T2639t _1_1_2639_2639 P49792 P49792 E3 SUMO-protein ligase RanBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.22181.22181.5 24.51 19.74 2.893 5 1 1 0 763.6091 3734.0558 T2639t TMT10 2621 (K) KKPEDSPSDDDVLIVYELtPTAEQK (A) KKPEDS(0.0)PS(0.0)DDDVLIVY(0.0)ELT(0.99)PT(0.0)AEQK K:TMT10,t:Phosphorylated T RANBP2 362585.9 2 60 9.1 1298.62 HUMAN 1 -4.187 17.2295 VLKAFPDSPGLNRTV-p P35270;S145-p VLKAFPDSPGLNRTV 0.193523334654365 0.0477102565539202 0.216333333333333 0.245666666666667 13.9231594401964 17.6737307084101 0.216333333333333 0.245666666666667 0.0405213640138467 0.0170854699590696 2.67882124873874 3.39381790910305 P35270 SPR P35270.S145.p_SPR P35270_S145s _1_1_145_145 P35270 P35270 Sepiapterin reductase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14090.14090.2 9.61 6.54 99 1 1 1 0 691.837 1302.7004 S145s TMT10 141 (K) AFPDsPGLNR (T) AFPDS(1.0)PGLNR s:Phosphorylated S SPR 28333.2 1 2 4043.1 38.7 HUMAN 1 13.9232 17.6737 VLKDFTVSGNLLFIR-p O75638-2;S129-p VLKDFTVSGNLLFIR 0.534118148817484 0.00829953850919329 -0.0973333333333333 0.44 5.04334065596254 29.5829968957587 -0.0973333333333334 0.44 0.313087648235349 0.00110077944270669 -1.11199462211725 6.29644789307445 O75638 CTAG2 O75638.2.S129.p_CTAG2 O75638-2_T127tS129s_2_2_127_129 O75638-2 O75638-2 Isoform LAGE-1A of Cancer/testis antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32359.32559.4 7.05 5.17 6.828 3 2 2 0 939.5154 3595.1252 T127t S129s TMT10 108 (R) ILSRDAAPLPRPGAVLKDFtVsGNLLFIR (L) ILS(0.0)RDAAPLPRPGAVLKDFT(0.99)VS(0.99)GNLLFIR K:TMT10,t:Phosphorylated T,s:Phosphorylated S CTAG2 18464.5 2 1 7277.1 7.05 HUMAN 1 -5.0433 29.583 VLKEVVESEGERKTK-p Q8TAQ2;S841-p VLKEVVESEGERKTK 0.218117737366325 0.00450910773110636 -0.520666666666667 0.661 12.7449786336815 34.4087270782573 -0.520666666666667 0.661 0.0531498614354692 0.000362349187785922 -2.46521338314026 7.87906255429837 Q8TAQ2 SMARCC2 Q8TAQ2.S841.p_SMARCC2 Q8TAQ2_S841s _1_1_841_841 Q8TAQ2 F8VXC8|Q8TAQ2|Q8TAQ2-3 SWI/SNF complex subunit SMARCC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7049.7049.3 9.95 9.95 99 1 1 1 0 567.2944 1619.9005 S841s TMT10 837 (K) EVVEsEGERK (T) EVVES(1.0)EGERK K:TMT10,s:Phosphorylated S SMARCC2 133276.4 1 11 499.1 292.05 HUMAN 1 -12.745 34.4087 VLKNLNNSNLFSPVN-p P52948;S608-p VLKNLNNSNLFSPVN 0.953407051152199 0.757356365974704 0.0103333333333333 -0.036 0.408234937607252 1.66715226165154 0.0103333333333333 -0.036 0.910283155321538 0.681215896430658 0.118054223580941 -0.433712831822712 P52948 NUP98 P52948.S608.p_NUP98 P52948_S608s _1_1_608_608 P52948 P52948|P52948-5|P52948-2|P52948-6|P52948-3 Nuclear pore complex protein Nup98-Nup96 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20094.20094.4 22.01 22.01 3.783 6 1 1 0 918.9259 3592.7102 S608s TMT10 604 (K) NLNNsNLFSPVNRDSENLASPSEYPENGER (F) NLNNS(0.99)NLFS(0.0)PVNRDS(0.0)ENLAS(0.0)PS(0.0)EY(0.0)PENGER s:Phosphorylated S NUP98 198716.8 3 4 187.1 472.84 HUMAN 1 0.4082 -1.6672 VLKTPTSSPASSPLV-p Q14684;S732-p VLKTPTSSPASSPLV 0.767067694804348 0.0108979565005272 -0.042 -1.24266666666667 2.20598791496529 27.4955096626043 -0.042 -1.24266666666667 0.601729368444223 0.00178011899224142 -0.553951286420012 -5.6968140519319 Q14684 RRP1B Q14684.S732.p_RRP1B Q14684_S732s _1_1_732_732 Q14684 Q14684|Q14684-2 Ribosomal RNA processing protein 1 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.15648.15648.2 10.84 10.84 1.122 6 1 1 0 941.009 1801.0471 S732s TMT10 728 (K) TPTSsPASSPLVAK (K) T(0.0)PT(0.0)S(0.0)S(0.99)PAS(0.0)S(0.0)PLVAK K:TMT10,s:Phosphorylated S RRP1B 84825.4 6 7 473.1 301.95 HUMAN 1 -2.206 -27.4955 VLLCRSNSIDGSNVT-p Q96PN7;S758-p VLLCRSNSIDGSNVT 0.219296303385567 0.208528833424842 0.310666666666667 0.165 12.6868582114027 8.95702315405073 0.310666666666667 0.165 0.0538659320441496 0.127144531129358 2.45479058030442 1.80027901045913 Q96PN7 TRERF1 Q96PN7.S758.p_TRERF1 Q96PN7_S758s _1_1_758_758 Q96PN7 Q96PN7|Q96PN7-5|Q96PN7-4|Q96PN7-3|Q96PN7-2 Transcriptional-regulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17305.17305.4 23.49 20.88 1.102 6 1 1 0 716.8464 2784.3849 S758s TMT10 756 (R) SNsIDGSNVTVTPGPGEQTVDVEPR (I) S(0.0)NS(0.99)IDGS(0.0)NVT(0.0)VT(0.0)PGPGEQT(0.0)VDVEPR s:Phosphorylated S TRERF1 132995.3 2 8 1115.1 175.65 HUMAN 1 12.6869 8.957 VLLDVTQSPGDGSGL-p Q8NB90;S274-p VLLDVTQSPGDGSGL 0.0881586637451288 0.00701753853914177 -0.327333333333333 -0.464333333333333 22.4835940113561 30.855355746826 -0.327333333333333 -0.464333333333333 0.00564469653652826 0.000821229280122629 -4.43339971279705 -6.68565122709694 Q8NB90 SPATA5 Q8NB90.S274.p_SPATA5 Q8NB90_S274s _1_1_274_274 Q8NB90 Q8NB90|Q8NB90-2|Q8NB90-3 Spermatogenesis-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.36547.36547.3 21.93 21.93 2.245 5 1 1 0 1090.5608 3189.6965 S274s TMT10 264 (K) ASDVLLDVTQsPGDGSGLMLEEVTGLK (C) AS(0.0)DVLLDVT(0.0)QS(0.99)PGDGS(0.0)GLMLEEVT(0.0)GLK K:TMT10,s:Phosphorylated S SPATA5 98530.3 3 4 2958.1 64.75 HUMAN 1 -22.4836 -30.8554 VLLEHLRSPLGARPY-p Q9UEG4;S761-p VLLEHLRSPLGARPY 0.938944485084594 0.0264579096715966 0.0116666666666667 -0.507333333333333 0.534846374425428 21.4129886031834 0.0116666666666667 -0.507333333333333 0.884128443449537 0.00722272599707554 0.152751742925461 -4.18469635980372 Q9UEG4 ZNF629 Q9UEG4.S761.p_ZNF629 Q9UEG4_S761s _1_1_761_761 Q9UEG4 Q9UEG4 Zinc finger protein 629 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.17574.17574.4 13.41 13.41 3.514 5 1 1 0 612.5831 2367.3458 S761s TMT10 751 (K) SSSVLLEHLRsPLGARPYR (C) S(0.0)S(0.0)S(0.0)VLLEHLRS(0.99)PLGARPY(0.0)R s:Phosphorylated S ZNF629 98957.8 1 155 240.4 415.72 HUMAN 1 0.5348 -21.413 VLLKHQASINELKRT-p Q9H4G0;S510-p VLLKHQASINELKRT 0.183791550733726 0.0820660922403875 0.212666666666667 -0.650666666666667 14.4689878971976 14.3905429723405 0.212666666666667 -0.650666666666667 0.0357356108603952 0.036386954085717 2.7794399495529 -2.76319527294109 Q9H4G0 EPB41L1 Q9H4G0.S510.p_EPB41L1 Q9H4G0_S510s _1_1_510_510 Q9H4G0 Q9H4G0|A0A0C4DH22|Q9H4G0-2|Q9H4G0-3 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9727.9727.2 12.74 12.74 99 1 1 1 0 789.4265 1497.8789 S510s TMT10 507 (K) HQAsINELK (R) HQAS(1.0)INELK K:TMT10,s:Phosphorylated S EPB41L1 99071.6 5 10 174.1 483.37 HUMAN 1 14.469 -14.3905 VLLMCNKSYCAEIAH-p F8W727;S112-p VLLMCNKSYCAEIAH 0.19388225330361 0.253958563825478 -0.228 -0.156666666666667 13.9107990600674 7.84019067855158 -0.228 -0.156666666666667 0.0406368554381775 0.164429952806891 -2.67655561671734 -1.60692654979375 F8W727 NotFound F8W727.S112.p_NotFound F8W727_S112s _1_1_112_112 F8W727 F8W727|P62910 60S ribosomal protein L32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13431.13431.3 19.11 19.11 2.405 4 1 1 0 668.6599 1923.9999 S112s TMT10 112 (K) sYCAEIAHNVSSK (N) S(0.99)Y(0.0)CAEIAHNVS(0.0)S(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RPL32 18133 1 2 3198.1 57.8 HUMAN 1 -13.9108 -7.8402 VLLPKKTSATVGPKA-p P16104;S122-p VLLPKKTSATVGPKA 0.420320976430283 0.00227464949884667 0.128 -1.299 6.94508926444666 40.813171056145 0.128 -1.299 0.202064989933265 8.2924506262836e-05 1.45139791501989 -10.5032334868541 P16104 H2AFX P16104.S122.p_H2AFX P16104_S122s _1_1_122_122 P16104 P16104 Histone H2AX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7972.7972.2 10.25 10.25 10.254 3 1 1 0 828.4862 1576.0037 S122s TMT10 120 (K) KTsATVGPK (A) KT(0.0)S(0.99)AT(0.0)VGPK K:TMT10,s:Phosphorylated S H2AFX 15144.3 4 6 3203.1 57.59 HUMAN 1 6.9451 -40.8132 VLLRGRESPAAGPRY-p F8VU39;S1768-p VLLRGRESPAAGPRY 0.266891167886536 0.0151721205562532 0.177333333333333 0.469 10.8740757279046 25.1628211337573 0.177333333333333 0.469 0.0817697042950383 0.00304591575027532 2.13406275175952 5.07874013083393 F8VU39 BAZ2A F8VU39.S1768.p_BAZ2A F8VU39_S1768s _1_1_1768_1768 F8VU39 Q9UIF9|F8VU39|Q9UIF9-3|Q9UIF9-2|J3KPG5 Bromodomain adjacent to zinc finger domain protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3754.3754.3 10.99 4.82 99 1 1 1 0 436.2207 1226.6803 S1768s TMT10 1765 (R) GREsPAAGPR (Y) GRES(1.0)PAAGPR s:Phosphorylated S BAZ2A 212873.4 3 15 471.1 302.34 HUMAN 1 10.8741 25.1628 VLLSFDDTPEKDSFR-p P49815-4;T927-p VLLSFDDTPEKDSFR 0.0709370859652101 0.00195162346428314 -0.428666666666667 -0.793 24.8114675903275 42.4259397689345 -0.428666666666667 -0.793 0.00330257919717338 5.72013163448663e-05 -4.99618524710315 -11.2782242770928 P49815 TSC2 P49815.4.T927.p_TSC2 P49815-4_T927t _1_1_927_927 P49815-4 P49815|P49815-4|P49815-2|P49815-3|H3BMQ0|P49815-5|P49815-6|P49815-7 Isoform 4 of Tuberin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23997.23997.3 15.81 9.49 2.256 4 1 1 0 836.7521 2428.276 T927t TMT10 918 (R) SNVLLSFDDtPEKDSFR (A) S(0.0)NVLLS(0.0)FDDT(0.99)PEKDS(0.0)FR K:TMT10,t:Phosphorylated T TSC2 200147.7 1 4 214.1 435.34 HUMAN 1 -24.8115 -42.4259 VLNKESHSPFGLDSF-p Q7LBC6;S1253-p VLNKESHSPFGLDSF 0.930467350861374 0.539072151578794 -0.0133333333333333 0.0766666666666667 0.621510793871402 3.61040891031205 -0.0133333333333333 0.0766666666666667 0.8666603354561 0.435470869961129 -0.176043783215686 0.841753014152527 Q7LBC6 KDM3B Q7LBC6.S1253.p_KDM3B Q7LBC6_S1253s _1_1_1253_1253 Q7LBC6 Q7LBC6|Q7LBC6-2|Q7LBC6-3 Lysine-specific demethylase 3B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18349.18349.3 15.72 15.72 1.251 5 1 1 0 754.7003 2182.1181 S1253s TMT10 1250 (K) ESHsPFGLDSFNSTAK (V) ES(0.0)HS(0.99)PFGLDS(0.0)FNS(0.0)T(0.0)AK K:TMT10,s:Phosphorylated S KDM3B 193289 2 17 305.1 374.1 HUMAN 1 -0.6215 3.6104 VLNLGKDSNNLCLHF-p P09382;S39-p VLNLGKDSNNLCLHF 0.588938726682811 0.148427198719736 0.0936666666666667 0.219333333333333 4.23398979241022 10.907931318315 0.0936666666666667 0.219333333333333 0.377225480808707 0.0811347436215234 0.961600968174936 2.139032295388 P09382 LGALS1 P09382.S39.p_LGALS1 P09382_S39s _1_1_39_39 P09382 P09382 Galectin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25728.25728.4 22.13 22.13 7.82 2 1 1 0 721.6238 2803.5078 S39s TMT10 30 (K) SFVLNLGKDsNNLCLHFNPR (F) S(0.0)FVLNLGKDS(0.99)NNLCLHFNPR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S LGALS1 15057.8 1 2 3146.1 59.28 HUMAN 1 4.234 10.9079 VLNLSSTSPEKKETI-p Q5VYS4;S228-p VLNLSSTSPEKKETI 0.212702492337707 0.27324476987538 1.40333333333333 0.618666666666667 12.9727881086486 7.42237426154915 1.40333333333333 0.618666666666667 0.0504337416181096 0.1810350114627 2.50616464007688 1.53431377886199 Q5VYS4 MEDAG Q5VYS4.S228.p_MEDAG Q5VYS4_S228s _1_1_228_228 Q5VYS4 Q5VYS4 Mesenteric estrogen-dependent adipogenesis protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.8009.8009.4 8.64 3.31 6.189 4 1 1 0 428.9867 1632.9573 S228s TMT10 221 (K) VLNLSSTsPEK (K) VLNLS(0.0)S(0.0)T(0.0)S(0.99)PEK K:TMT10,s:Phosphorylated S MEDAG 34474.7 2 1 6931.1 8.64 HUMAN 1 12.9728 7.4224 VLNNFIESPSKLLDT-p Q6N021;S1107-p VLNNFIESPSKLLDT 0.308410963773237 0.00606484312491525 -0.154 -0.539 9.54988983047525 31.9980243393104 -0.154 -0.539 0.110920295257873 0.000631244440276875 -1.90360547967862 -7.05165643103819 Q6N021 TET2 Q6N021.S1107.p_TET2 Q6N021_S1107s _1_1_1107_1107 Q6N021 E7EQS8|Q6N021|Q6N021-3|E7EPB1|Q6N021-2 Methylcytosine dioxygenase TET2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21060.21060.3 20.11 15.58 2.47 4 1 1 0 758.0751 2192.2439 S1107s TMT10 1095 (K) RTAASVLNNFIEsPSK (L) RT(0.0)AAS(0.0)VLNNFIES(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S TET2 226374.6 11 12 594.1 264.06 HUMAN 1 -9.5499 -31.998 VLNNNEESLTCGIEQ-p Q8N8Q9;S337-p VLNNNEESLTCGIEQ 0.564664126408835 0.451568642728323 0.121666666666667 0.0756666666666667 4.57383834024783 4.60109716554712 0.121666666666667 0.0756666666666667 0.348831877920773 0.346649264795316 1.02534865582339 1.03022765054291 Q8N8Q9 NIPA2 Q8N8Q9.S337.p_NIPA2 Q8N8Q9_S337s _1_1_337_337 Q8N8Q9 Q8N8Q9|Q8N8Q9-2 Magnesium transporter NIPA2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26773.26773.4 30.8 28.04 2.285 6 1 1 0 1034.2087 4053.8538 S337s TMT10 319 (K) AMNGNLSNMYEVLNNNEEsLTCGIEQHTGENVSR (R) AMNGNLS(0.0)NMY(0.0)EVLNNNEES(0.99)LT(0.0)CGIEQHT(0.0)GENVS(0.0)R C:Carbamidomethylation,s:Phosphorylated S NIPA2 39526.6 5 1 3681.1 45.47 HUMAN 1 4.5738 4.6011 VLPAFRESPSGRLMR-p O43166;S1255-p VLPAFRESPSGRLMR 0.17801215785102 0.0189261276175014 -0.229333333333333 -0.345 14.8200214502919 23.7023590614356 -0.229333333333333 -0.345 0.0329608084202115 0.00426347866301283 -2.84476371052403 -4.71696205121351 O43166 SIPA1L1 O43166.S1255.p_SIPA1L1 O43166_S1255s _1_1_1255_1255 O43166 O43166|O43166-2|O43166-3|F5GYF8 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16025.16025.2 8.53 4.92 1.77 2 1 1 0 812.9242 1544.8746 S1255s TMT10 1248 (K) VLPAFREsPSGR (L) VLPAFRES(0.99)PS(0.0)GR s:Phosphorylated S SIPA1L1 201223.1 3 16 46.1 777.88 HUMAN 1 -14.82 -23.7024 VLPALLPS_______-p P16930;S419-p VLPALLPS_______ 0.576214180707572 0.0184576390808072 0.145 0.450333333333333 4.40421000309447 23.8604344308142 0.145 0.450333333333333 0.362726261424204 0.00411108595282702 0.993648228732111 4.75524436343483 P16930 FAH P16930.S419.p_FAH P16930_S419s _1_1_419_419 P16930 P16930|P16930-2 Fumarylacetoacetase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33977.33977.2 7.23 7.23 99 1 1 1 0 559.8259 1038.676 S419s TMT10 412 (K) VLPALLPs (-) VLPALLPS(1.0) s:Phosphorylated S FAH 46772.9 1 2 5064.1 23.38 HUMAN 1 4.4042 23.8604 VLPAPQISDAELQEV-p Q99459;S303-p VLPAPQISDAELQEV 0.438965780358395 0.76343678526714 0.136 -0.0406666666666666 6.58465338513119 1.62043584359653 0.136 -0.0406666666666666 0.21955061677408 0.688583188942308 1.38809459663538 -0.422955820492218 Q99459 CDC5L Q99459.S303.p_CDC5L Q99459_S303s _1_1_303_303 Q99459 Q99459 Cell division cycle 5-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.33250.33250.3 15.7 15.7 99 1 1 1 0 829.8 2407.4212 S303s TMT10 295 (K) LVLPAPQIsDAELQEVVK (V) LVLPAPQIS(1.0)DAELQEVVK K:TMT10,s:Phosphorylated S CDC5L 92477.2 3 3 751.1 232.35 HUMAN 1 6.5847 -1.6204 VLPASELSDPGLLLK-p Q5VYV7;S340-p VLPASELSDPGLLLK 0.321266030442159 0.0916686227260607 0.211666666666667 -0.243 9.23304214640945 13.726836767202 0.211666666666667 -0.243 0.119315203242077 0.0423951643578473 1.84871134367459 -2.64135365241644 Q5VYV7 SLX4IP Q5VYV7.S340.p_SLX4IP Q5VYV7_S340s _1_1_340_340 Q5VYV7 Q5VYV7 Protein SLX4IP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32888.32888.3 13.71 13.71 1.407 2 1 1 0 697.4052 2010.2251 S340s TMT10 333 (R) VLPASELsDPGLLLK (Q) VLPAS(0.0)ELS(0.99)DPGLLLK K:TMT10,s:Phosphorylated S SLX4IP 46121.3 1 3 2344.1 87.17 HUMAN 1 9.233 -13.7268 VLPDPAATHDGPQSP-p Q16512-2;T112-p VLPDPAATHDGPQSP 0.204124866753728 0.782733874879313 0.366333333333333 0.0286666666666667 13.3600818534523 1.47312502726854 0.366333333333333 0.0286666666666667 0.0461308879980594 0.712340271166541 2.57615873195013 0.388638853066941 Q16512 PKN1 Q16512.2.T112.p_PKN1 Q16512-2_T112t_1_1_112_112 Q16512-2 Q16512-2|Q16512-3 Isoform 2 of Serine/threonine-protein kinase N1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.22858.22858.5 18.6 18.6 1.115 6 1 1 0 1015.3082 4991.5496 T112t N130n TMT10 89 (R) RLDLLHQQLQELHAHVVLPDPAAtHDGPQSPGAGGPTCSATnLSR (V) RLDLLHQQLQELHAHVVLPDPAAT(0.99)HDGPQS(0.0)PGAGGPT(0.0)CS(0.0)AT(0.0)N(1.0)LS(0.0)R C:Carbamidomethylation,t:Phosphorylated T,n:Deamidated PKN1 105469.7 1 2 721.1 237.15 HUMAN 1 13.3601 1.4731 VLPEGGETPLFKQFF-p P06396;T386-p VLPEGGETPLFKQFF 0.463034255771599 0.0567818538495454 0.103333333333333 0.256333333333333 6.16983167682026 16.6018343458656 0.103333333333333 0.256333333333333 0.241555445431447 0.0218683776600066 1.31476180260209 3.1822646554136 P06396 GSN P06396.T386.p_GSN P06396_T386t _1_1_386_386 P06396 P06396|A0A0A0MT01|A0A0A0MS51|P06396-3|P06396-4|P06396-2 Gelsolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25533.25533.3 20.01 20.01 7.029 3 1 1 0 790.0906 2288.2902 T386t TMT10 374 (K) QTQVSVLPEGGEtPLFK (Q) QT(0.0)QVS(0.0)VLPEGGET(0.99)PLFK K:TMT10,t:Phosphorylated T GSN 86095.3 4 2 1746.1 117.91 HUMAN 1 6.1698 16.6018 VLPELPLSPLCPSNR-p Q86Y91-4;S843-p VLPELPLSPLCPSNR 0.775692517141108 0.91370228264332 -0.0416666666666667 0.011 2.11319336363393 0.549487259004882 -0.0416666666666667 0.011 0.614724699939764 0.881152898401667 -0.533726118667217 0.156697372302075 Q86Y91 KIF18B Q86Y91.4.S843.p_KIF18B Q86Y91-4_S843s _1_1_843_843 Q86Y91-4 Q86Y91-4|Q86Y91-3|A0A0C4DGP5 Isoform 4 of Kinesin-like protein KIF18B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.26914.26914.4 13.94 13.94 1.368 2 1 1 0 687.8824 2668.5282 S843s TMT10 830 (K) RPAGPLVLPELPLsPLCPSNRR (N) RPAGPLVLPELPLS(0.99)PLCPS(0.0)NRR C:Carbamidomethylation,s:Phosphorylated S KIF18B 96039.4 3 8 959.1 194.54 HUMAN 1 -2.1132 0.5495 VLPFTLNSGSPEKTC-p P42695;S1382-p VLPFTLNSGSPEKTC 0.199341528435404 0.380728624405919 -0.210333333333333 -0.157666666666667 13.6277348963814 5.57318908727218 -0.210333333333333 -0.157666666666667 0.0433737039026601 0.27712843630664 -2.62482049924228 -1.2078699832788 P42695 NCAPD3 P42695.S1382.p_NCAPD3 P42695_S1382sS1384s_2_2_1382_1384 P42695 P42695 Condensin-2 complex subunit D3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34624.34624.3 15.02 11.63 1.697 4 2 2 0 755.3834 2104.2054 S1382s S1384s TMT10 1372 (R) SLGVLPFTLNsGsPEK (T) S(0.0)LGVLPFT(0.0)LNS(0.99)GS(0.99)PEK K:TMT10,s:Phosphorylated S NCAPD3 171055.8 5 12 1254.1 161.61 HUMAN 1 -13.6277 -5.5732 VLPLALPSPPRQLSE-p Q9ULI0;S939-p VLPLALPSPPRQLSE 0.232365737282587 0.0973119177737293 0.181666666666667 -0.19 12.1865999622956 13.3788002297009 0.181666666666667 -0.19 0.0604421638409736 0.0459324887173681 2.36547657957887 -2.57808995402538 Q9ULI0 ATAD2B Q9ULI0.S939.p_ATAD2B Q9ULI0_S939s _1_1_939_939 Q9ULI0 Q9ULI0|Q9ULI0-2 ATPase family AAA domain-containing protein 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30219.30219.4 26.31 26.31 99 1 1 1 0 588.8098 2272.2507 S939s TMT10 924 (K) HAALCAMEVLPLALPsPPR (Q) HAALCAMEVLPLALPS(1.0)PPR C:Carbamidomethylation,s:Phosphorylated S ATAD2B 166451.5 7 8 531.1 280.81 HUMAN 1 12.1866 -13.3788 VLPQARASWESLDEE-p Q00587;S350-p VLPQARASWESLDEE 0.688548333856034 0.140953168621393 0.075 -0.177 3.04095626549571 11.2127318830128 0.075 -0.177 0.496482989684631 0.075635696708321 0.728718770646568 -2.1924103008306 Q00587 CDC42EP1 Q00587.S350.p_CDC42EP1 Q00587_S350s _1_1_350_350 Q00587 Q00587|Q00587-2 Cdc42 effector protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20888.20888.3 19.58 19.58 2.337 3 1 1 0 795.3678 2304.1206 S350s TMT10 349 (R) AsWESLDEEWRAPQAGSR (T) AS(0.99)WES(0.0)LDEEWRAPQAGS(0.0)R s:Phosphorylated S CDC42EP1 40408.2 5 8 1362.1 149.93 HUMAN 1 3.041 -11.2127 VLPQGPPTPAKTPGA-p Q8IWY9;T71-p VLPQGPPTPAKTPGA 0.955641444333664 0.0014286003693118 -0.00833333333333334 -0.917333333333333 0.387483905995113 45.974691353574 -0.00833333333333334 -0.917333333333333 0.914642988295175 2.52656726301107e-05 -0.112287972434625 -13.1751897975243 Q8IWY9 CDAN1 Q8IWY9.T71.p_CDAN1 Q8IWY9_T71t _1_1_71_71 Q8IWY9 Q8IWY9|Q8IWY9-1 Codanin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16567.16567.5 20.92 18.24 4.517 3 1 1 0 637.3581 3102.794 T71t TMT10 64 (R) VLPQGPPtPAKTPGASAALPGRPGGPPR (G) VLPQGPPT(0.99)PAKT(0.0)PGAS(0.0)AALPGRPGGPPR K:TMT10,t:Phosphorylated T CDAN1 135657.7 6 1 1756.1 117.34 HUMAN 1 -0.3875 -45.9747 VLPSISLSPGPQPPK-p Q99638;S328-p VLPSISLSPGPQPPK 0.358160899463675 0.00356137322963082 -0.203333333333333 0.905333333333333 8.28461019363803 36.5038018641315 -0.203333333333333 0.905333333333334 0.148435910456552 0.000223676219375387 -1.68450026956902 8.66464930098116 Q99638 RAD9A Q99638.S328.p_RAD9A Q99638_S328s _1_1_328_328 Q99638 Q99638 Cell cycle checkpoint control protein RAD9A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26956.26956.3 14.37 14.37 1.239 3 1 1 0 685.7276 1975.1992 S328s TMT10 321 (R) VLPSISLsPGPQPPK (S) VLPS(0.0)IS(0.0)LS(0.99)PGPQPPK K:TMT10,s:Phosphorylated S RAD9A 43117.2 2 3 1917.1 107.16 HUMAN 1 -8.2846 36.5038 VLPTVPESPEEEVKA-p O75152;S108-p VLPTVPESPEEEVKA 0.744043857023488 0.101386756740517 -0.0476666666666667 -0.178666666666667 2.43760313083295 13.134528105726 -0.0476666666666667 -0.178666666666667 0.570479032519756 0.0485900324867367 -0.603670585891682 -2.53392915735405 O75152 ZC3H11A O75152.S108.p_ZC3H11A O75152_S108s _1_1_108_108 O75152 O75152|E9PQ61|A0A1W2PPR9 Zinc finger CCCH domain-containing protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23553.23553.4 18.15 18.15 5.347 5 1 1 0 876.9755 3424.9142 S108s TMT10 100 (K) TVLPTVPEsPEEEVKASQLSVQQNK (L) T(0.0)VLPT(0.0)VPES(0.99)PEEEVKAS(0.0)QLS(0.0)VQQNK K:TMT10,s:Phosphorylated S ZC3H11A 89985.3 6 1 890.1 204.63 HUMAN 1 -2.4376 -13.1345 VLQAEADSTSEGLED-p Q27J81;S1147-p VLQAEADSTSEGLED 0.751843730021537 0.0228976818927485 0.0466666666666667 -0.314666666666667 2.36271597402912 22.3911702686591 0.0466666666666667 -0.314666666666667 0.580401334860168 0.00576611066349083 0.58770978811226 -4.40719010828702 Q27J81 INF2 Q27J81.S1147.p_INF2 Q27J81_S1147s _1_1_1147_1147 Q27J81 Q27J81|Q27J81-2 Inverted formin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.29181.29392.4 27.49 23.66 1.15 6 1 1 0 945.222 3697.8921 S1147s TMT10 1129 (R) QDAKDPTSLLGVLQAEADsTSEGLEDAVHSR (G) QDAKDPT(0.0)S(0.0)LLGVLQAEADS(0.99)T(0.0)S(0.0)EGLEDAVHS(0.0)R K:TMT10,s:Phosphorylated S INF2 136934.1 9 7 356.1 347.64 HUMAN 1 2.3627 -22.3912 VLQAPPGSPRPLDRP-p O15417;S416-p VLQAPPGSPRPLDRP 0.51428507339171 0.474480174367929 0.111 -0.0893333333333333 5.33394122038038 4.31731947030816 0.111 -0.0893333333333333 0.29282346675204 0.370056513653821 1.16491770815792 -0.977144725932684 O15417 TNRC18 O15417.S416.p_TNRC18 O15417_S416s _1_1_416_416 O15417 O15417|H9KVB4|O15417-2 Trinucleotide repeat-containing gene 18 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10520.10520.5 17.68 13.06 99 1 1 1 0 638.5445 3108.7228 S416s Hydrogen 403 (R) EAGRPGVLQAPPGsPRPLDRPEGLREK (N) EAGRPGVLQAPPGS(1.0)PRPLDRPEGLREK K:TMT10-Lys-Only,s:Phosphorylated S TNRC18 316168 4 4 75.1 647.68 HUMAN 1 5.3339 -4.3173 VLQGRWLSDECTNAV-p O75521;S377-p VLQGRWLSDECTNAV 0.172364497862273 0.132411490459811 0.373666666666667 0.229 15.2036958480141 11.5738672290066 0.373666666666667 0.229 0.0301738283333298 0.0696006470506457 2.91674252714393 2.25589155210255 O75521 ECI2 O75521.S377.p_ECI2 O75521_S377s _1_1_377_377 O75521 O75521|A0A0C4DGA2|O75521-2 Enoyl-CoA delta isomerase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34282.34282.3 12.13 12.13 1.333 3 1 1 0 740.683 2140.0695 S377s TMT10 375 (R) WLsDECTNAVVNFLSR (K) WLS(0.99)DECT(0.0)NAVVNFLS(0.0)R C:Carbamidomethylation,s:Phosphorylated S ECI2 43983.7 1 6 2084.1 98.15 HUMAN 1 15.2037 11.5739 VLQGVDLSPDITRQR-p Q7L775;S146-p VLQGVDLSPDITRQR 0.790771125786883 0.230278837440525 0.0376666666666667 0.136333333333333 1.96776950488179 8.40022732704448 0.0376666666666667 0.136333333333333 0.635657315577189 0.144536411264639 0.501652476755974 1.70395946059536 Q7L775 EPM2AIP1 Q7L775.S146.p_EPM2AIP1 Q7L775_S146s _1_1_146_146 Q7L775 Q7L775 EPM2A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26607.26607.3 18.07 18.07 2.202 3 1 1 0 871.4579 2532.3871 S146s TMT10 131 (R) EVLPEHVSVLQGVDLsPDITR (Q) EVLPEHVS(0.0)VLQGVDLS(0.99)PDIT(0.0)R s:Phosphorylated S EPM2AIP1 70995.9 2 1 4884.1 25.48 HUMAN 1 1.9678 8.4002 VLQHYQESDKGEELG-p Q9Y6C9;S98-p VLQHYQESDKGEELG 0.219515218711366 0.235966317187003 0.341333333333333 0.136666666666667 12.6817893180224 8.25813579163703 0.341333333333333 0.136666666666667 0.0539288386847496 0.149343532888591 2.45388204202317 1.67936262408134 Q9Y6C9 MTCH2 Q9Y6C9.S98.p_MTCH2 Q9Y6C9_S98s_1_1_98_98 Q9Y6C9 Q9Y6C9 Mitochondrial carrier homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14457.14457.4 16.99 16.99 11.95 2 1 1 0 781.6586 3042.6463 S98s N108n TMT10 91 (K) VLQHYQEsDKGEELGPGnVQK (E) VLQHY(0.0)QES(0.99)DKGEELGPGN(1.0)VQK K:TMT10,s:Phosphorylated S,n:Deamidated MTCH2 33957.9 2 4 3112.1 60.36 HUMAN 1 12.6818 8.2581 VLQLEDDSLDSKGKE-p Q5JSH3;S81-p VLQLEDDSLDSKGKE 0.496630998511602 0.0981690952165844 -0.202333333333333 0.238666666666667 5.59763071617331 13.324660220367 -0.202333333333333 0.238666666666667 0.275573167657799 0.0465086761806815 -1.21253754561064 2.56828545897272 Q5JSH3 WDR44 Q5JSH3.S81.p_WDR44 Q5JSH3_S81s _1_1_81_81 Q5JSH3 Q5JSH3|Q5JSH3-2|Q5JSH3-4 WD repeat-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22315.22315.3 10.25 10.25 3.982 2 1 1 0 633.9949 1820.0053 S81s TMT10 74 (K) VLQLEDDsLDSK (G) VLQLEDDS(0.99)LDS(0.0)K K:TMT10,s:Phosphorylated S WDR44 101935 1 4 95.1 607.92 HUMAN 1 -5.5976 13.3247 VLQPQPGSLNSSIWD-p Q86TB9-4;S120-p VLQPQPGSLNSSIWD 0.809924688163494 0.0528890092649315 -0.0506666666666667 -0.274666666666667 1.76037928798328 17.0307950397263 -0.0506666666666667 -0.274666666666667 0.66674853666367 0.0198116431143056 -0.455057200369247 -3.26620815794533 Q86TB9 PATL1 Q86TB9.4.S120.p_PATL1 Q86TB9-4_S120s_1_1_120_120 Q86TB9-4 Q86TB9|Q86TB9-4 Isoform 4 of Protein PAT1 homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23755.23755.4 15.14 13.35 1.486 5 1 1 0 850.9455 3319.8072 S120s N122n TMT10 107 (R) AVQTRPVLQPQPGsLnSSIWDGSEVLRR (I) AVQT(0.0)RPVLQPQPGS(0.99)LN(1.0)S(0.0)S(0.0)IWDGS(0.0)EVLRR s:Phosphorylated S,n:Deamidated PATL1 80249 2 1 1540.1 133.07 HUMAN 1 -1.7604 -17.0308 VLQQAGGSMMDGPGP-p Q9UQ35;S2155-p VLQQAGGSMMDGPGP 0.651183474642633 0.096962923079838 -0.0613333333333334 0.223 3.49320296946909 13.4020684744684 -0.0613333333333334 0.223 0.44738323243148 0.045687053772938 -0.818924352131158 2.58230670276662 Q9UQ35 SRRM2 Q9UQ35.S2155.p_SRRM2 Q9UQ35_S2155s_1_1_2155_2155 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.19059.19059.3 10.92 10.92 10.925 3 1 1 0 786.685 2246.0929 S2155s M2156m M2157m TMT10 2144 (R) TPMSVLQQAGGsmmDGPGPR (I) T(0.0)PM(0.0)S(0.0)VLQQAGGS(0.99)M(0.99)M(0.99)DGPGPR s:Phosphorylated S,m:Oxidized methionine SRRM2 300351.7 2 138 2.1 3310.34 HUMAN 1 -3.4932 13.4021 VLQRCIVSPAGRHSA-p Q5VWZ2;S15-p VLQRCIVSPAGRHSA 0.539743800473841 0.256027205176725 0.0896666666666667 0.133333333333333 4.94759980168332 7.79324983630704 0.0896666666666667 0.133333333333333 0.32006635191575 0.166216838018932 1.09444667530621 1.59878024975741 Q5VWZ2 LYPLAL1 Q5VWZ2.S15.p_LYPLAL1 Q5VWZ2_S15s _1_1_15_15 Q5VWZ2 Q5VWZ2|Q5VWZ2-2 Lysophospholipase-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8558.8558.2 7.26 7.26 99 1 1 1 0 584.7915 1088.6084 S15s TMT10 12 (R) CIVsPAGR (H) CIVS(1.0)PAGR C:Carbamidomethylation,s:Phosphorylated S LYPLAL1 26601.2 1 1 7214.1 7.26 HUMAN 1 4.9476 7.7932 VLQRDPNSPLYSVKS-p H3BQK0;S91-p VLQRDPNSPLYSVKS 0.566691167495734 0.0223761793236319 -0.0766666666666667 -0.355 4.54352526425042 22.5410335488893 -0.0766666666666667 -0.355 0.351275186941315 0.00557053163735343 -1.01970021048168 -4.4419118292771 H3BQK0 DDX19B H3BQK0.S91.p_DDX19B H3BQK0_S91s _1_1_91_91 H3BQK0 H3BQK0|Q9UMR2|F6QDS0|Q9NUU7|Q9UMR2-4|Q9UMR2-2|I3L0H8|H3BTB3 ATP-dependent RNA helicase DDX19B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22399.22399.4 12.76 12.76 3.533 5 1 1 0 842.6879 3287.7636 S91s TMT10 73 (R) SNLVDNTNQVEVLQRDPNsPLYSVK (S) S(0.0)NLVDNT(0.0)NQVEVLQRDPNS(0.99)PLY(0.0)S(0.0)VK K:TMT10,s:Phosphorylated S DDX19B 54955.2 1 1 3616.1 46.87 HUMAN 1 -4.5435 -22.541 VLQSPGLSGKVKRDA-p Q13045;S860-p VLQSPGLSGKVKRDA 0.677849654437065 0.0515572783410691 0.0646666666666667 -0.240333333333333 3.16096950809848 17.185292753924 0.0646666666666667 -0.240333333333333 0.482950977241237 0.0191192443918902 0.752921614010724 -3.29667301201909 Q13045 FLII Q13045.S860.p_FLII Q13045_S860s _1_1_860_860 Q13045 Q13045|Q13045-3|Q13045-2 Protein flightless-1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18327.18327.3 16.81 16.81 2.701 2 1 1 0 637.0124 1829.0533 S860s TMT10 849 (R) NAEAVLQSPGLsGK (V) NAEAVLQS(0.0)PGLS(0.99)GK K:TMT10,s:Phosphorylated S FLII 146231.9 1 6 2583.1 77.55 HUMAN 1 3.161 -17.1853 VLRERPPTVIMDLIQ-p Q9UL54;T288-p VLRERPPTVIMDLIQ 0.428040639115941 0.269610429958332 -0.231333333333333 -0.139333333333333 6.78528448640499 7.49586307221137 -0.231333333333333 -0.139333333333333 0.209638745106301 0.177997413993882 -1.42337353779892 -1.54710396907808 Q9UL54 TAOK2 Q9UL54.T288.p_TAOK2 Q9UL54_T288t _1_1_288_288 Q9UL54 Q9UL54|Q9UL54-4|Q9UL54-3 Serine/threonine-protein kinase TAO2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29261.29261.3 10.84 10.84 99 1 1 1 0 626.3364 1797.0254 T288t TMT10 284 (R) ERPPtVIMDLIQR (T) ERPPT(1.0)VIMDLIQR t:Phosphorylated T TAOK2 139047.7 1 2 2238.99 92.22 HUMAN 1 -6.7853 -7.4959 VLRKEPVTPSALVLM-p Q96GD4-5;T35-p VLRKEPVTPSALVLM 0.796533086486291 0.0745171419692153 -0.046 -0.315666666666667 1.90554859896527 14.9707824787975 -0.046 -0.315666666666667 0.644829860086168 0.0318362386889161 -0.487781993146859 -2.87110415610622 Q96GD4 AURKB Q96GD4.5.T35.p_AURKB Q96GD4-5_T35t _1_1_35_35 Q96GD4-5 Q96GD4-5|Q96GD4-2|Q96GD4-3|J3KRF8 Isoform 5 of Aurora kinase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20992.20992.3 12.17 12.17 3.043 3 1 1 0 613 1757.0193 T35t Hydrogen 31 (R) KEPVtPSALVLMSR (S) KEPVT(0.99)PS(0.0)ALVLMS(0.0)R K:TMT10-Lys-Only,t:Phosphorylated T AURKB 39751.3 1 2 4692.1 27.88 HUMAN 1 -1.9055 -14.9708 VLRLSEAYSRVQYQF-p O75815;Y212-p VLRLSEAYSRVQYQF 0.289476318852906 0.453720722515677 -0.263333333333333 0.113 10.1543593345142 4.57433162514991 -0.263333333333333 0.113 0.096508166887878 0.348792258783536 -2.00854117033129 1.02524799976674 O75815 BCAR3 O75815.Y212.p_BCAR3 O75815_Y212y _1_1_212_212 O75815 O75815|O75815-3 Breast cancer anti-estrogen resistance protein 3 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8402.8515.2 13.24 4.4 1.699 3 1 1 0 567.7732 1054.573 Y212y TMT10 208 (R) LSEAySR (V) LS(0.0)EAY(0.99)S(0.0)R y:Phosphorylated Y BCAR3 93533.8 2 1 266.1 13.24 HUMAN 1 -10.1544 4.5743 VLRQRSRSLSSSGTK-p Q9NZJ5;S1094-p VLRQRSRSLSSSGTK 0.58471981560589 0.0138497923606645 -0.0933333333333334 -0.509333333333333 4.28706461948655 25.806134064287 -0.0933333333333333 -0.509333333333333 0.37264348952645 0.0026265555698343 -0.971619746435278 -5.24406411857715 Q9NZJ5 EIF2AK3 Q9NZJ5.S1094.p_EIF2AK3 Q9NZJ5_S1094s _1_1_1094_1094 Q9NZJ5 Q9NZJ5|E7ER02 Eukaryotic translation initiation factor 2-alpha kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7546.7546.2 11.15 2.76 3.256 5 1 1 0 652.8475 1224.72 S1094s TMT10 1094 (R) sLSSSGTK (H) S(0.99)LS(0.0)S(0.0)S(0.0)GT(0.0)K K:TMT10,s:Phosphorylated S EIF2AK3 126241 3 10 1191.1 168.13 HUMAN 1 -4.2871 -25.8061 VLSAGSGSPSATSIL-p Q9UMZ2;S919-p VLSAGSGSPSATSIL 0.0474287332201862 0.0044701403183903 -0.493333333333333 -0.571666666666667 29.4199713848824 34.5097575321236 -0.493333333333333 -0.571666666666667 0.00114288586509629 0.000354017105409993 -6.25757143731787 -7.91547106617551 Q9UMZ2 SYNRG Q9UMZ2.S919.p_SYNRG Q9UMZ2_S919s _1_1_919_919 Q9UMZ2 Q9UMZ2|Q9UMZ2-5|Q9UMZ2-7|Q9UMZ2-3|Q9UMZ2-8|Q9UMZ2-4 Synergin gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.32368.32368.3 25.33 25.33 1.184 7 1 1 0 862.4707 2505.4329 S919s TMT10 908 (K) LSPFVLSAGSGsPSATSILQK (K) LS(0.0)PFVLS(0.0)AGS(0.0)GS(0.99)PS(0.0)AT(0.0)S(0.0)ILQK K:TMT10,s:Phosphorylated S SYNRG 141393.5 6 11 236.1 418.49 HUMAN 1 -29.42 -34.5098 VLSAHRKSLNLVDSP-p P46019;S729-p VLSAHRKSLNLVDSP 0.463694272097738 0.094914380729515 -0.193666666666667 0.201333333333333 6.1560312369049 13.5252146823041 -0.193666666666667 0.201333333333333 0.242324249470518 0.0444097707995313 -1.31231199481248 2.60465385495378 P46019 PHKA2 P46019.S729.p_PHKA2 P46019_S729s _1_1_729_729 P46019 P46019 Phosphorylase b kinase regulatory subunit alpha, liver isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.28160.28160.5 22.63 17.71 3.285 3 1 1 0 947.2761 4652.3546 S729s TMT10 729 (K) sLNLVDSPQPLLEKVPESDFQWPRDDHGDVDCEK (L) S(0.99)LNLVDS(0.0)PQPLLEKVPES(0.0)DFQWPRDDHGDVDCEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PHKA2 139489.6 3 2 2510.1 80.53 HUMAN 1 -6.156 13.5252 VLSEDEKSDNEDKEE-p Q9BXB5;S380-p VLSEDEKSDNEDKEE 0.363402580561362 0.917369744589267 -0.427666666666667 0.084 8.16252566468564 0.526845806018222 -0.427666666666667 0.0840000000000002 0.152667795162596 0.885758685097823 -1.66334327263911 0.150569114546867 Q9BXB5 OSBPL10 Q9BXB5.S380.p_OSBPL10 Q9BXB5_S380s _1_1_380_380 Q9BXB5 Q9BXB5|Q9BXB5-2 Oxysterol-binding protein-related protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15151.15151.3 15.28 8.58 4.507 2 1 1 0 888.0698 2582.2292 S380s TMT10 380 (K) sDNEDKEETELGVMEDQR (S) S(0.99)DNEDKEET(0.0)ELGVMEDQR K:TMT10,s:Phosphorylated S OSBPL10 84767.3 1 6 1766.1 116.53 HUMAN 1 -8.1625 0.5268 VLSKMMGSPKSEFTK-p Q9Y2F5;S558-p VLSKMMGSPKSEFTK 0.398002572398755 0.0346886269213625 -0.120666666666667 -0.525333333333333 7.38455154298294 19.6612593794369 -0.120666666666667 -0.525333333333333 0.182618531314154 0.0108112039948287 -1.52817309155796 -3.80314509445217 Q9Y2F5 ICE1 Q9Y2F5.S558.p_ICE1 Q9Y2F5_S558s _1_1_558_558 Q9Y2F5 Q9Y2F5 Little elongation complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16966.16966.3 10.09 10.09 10.091 3 1 1 0 670.6857 1930.0745 S558s TMT10 555 (K) MMGsPKSEFTK (W) MMGS(0.99)PKS(0.0)EFT(0.0)K K:TMT10,s:Phosphorylated S ICE1 250910.2 2 5 216.1 433.09 HUMAN 1 -7.3846 -19.6613 VLSLLNLSPRHNKKE-p Q96AY4;S2398-p VLSLLNLSPRHNKKE 0.998250411735214 0.104617735529855 0.000333333333333334 -0.239 0.0110133472280414 12.9543865391328 0.00033333333333333 -0.239 0.99746729580587 0.0506478886936121 0.00332353293120548 -2.50148414941008 Q96AY4 TTC28 Q96AY4.S2398.p_TTC28 Q96AY4_S2398s _1_1_2398_2398 Q96AY4 Q96AY4|A0A087WW06 Tetratricopeptide repeat protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.33458.33458.3 11.55 11.55 6.1 2 1 1 0 512.6176 1455.8732 S2398s TMT10 2390 (R) DVLSLLNLsPR (H) DVLS(0.0)LLNLS(0.99)PR s:Phosphorylated S TTC28 272819.5 4 9 1011.1 188.93 HUMAN 1 0.011 -12.9544 VLSNRGDSLSRHARP-p Q15642;S482-p VLSNRGDSLSRHARP 0.436347219547088 0.0945664725509714 0.192333333333333 -0.239666666666667 6.62936121864771 13.5458008056559 0.192333333333333 -0.239666666666667 0.217302077377644 0.0441997608398169 1.39596576803517 -2.60839458692197 Q15642 TRIP10 Q15642.S482.p_TRIP10 Q15642_S482s _1_1_482_482 Q15642 Q15642|Q15642-3|W4VSQ9|Q15642-2|Q15642-4|M0R0F9 Cdc42-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7671.7671.3 11.46 11.46 2.379 3 1 1 0 504.9292 1432.807 S482s TMT10 475 (R) VLSNRGDsLSR (H) VLS(0.0)NRGDS(0.99)LS(0.0)R s:Phosphorylated S TRIP10 68579.3 4 3 2083.1 98.23 HUMAN 1 6.6294 -13.5458 VLSTRPHS_______-p O95865;S285-p VLSTRPHS_______ 0.995689694302779 0.689932291331008 0.001 0.0446666666666667 0.0352361660783997 2.20890332712053 0.001 0.0446666666666667 0.991919397940364 0.601325563999555 0.0106039563727579 0.554516858030459 O95865 DDAH2 O95865.S285.p_DDAH2 O95865_S285s _1_1_285_285 O95865 O95865 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26108.26108.3 17.14 17.14 2.578 5 1 1 0 712.3668 2055.1218 S285s TMT10 268 (K) AGAGLSSLCLVLSTRPHs (-) AGAGLS(0.0)S(0.0)LCLVLS(0.0)T(0.0)RPHS(0.99) C:Carbamidomethylation,s:Phosphorylated S DDAH2 29928.6 1 3 3829.1 42.18 HUMAN 1 0.0352 2.2089 VLTKSGRSAHQVARY-p P14618;S437-p VLTKSGRSAHQVARY 0.140621777582522 0.0262377057275732 0.370666666666667 0.985333333333333 17.4339740672233 21.4909697378118 0.370666666666667 0.985333333333333 0.0180552120458347 0.00709419343759804 3.34860460001788 4.2021759230817 P14618 PKM P14618.S437.p_PKM P14618_S437s _1_1_437_437 P14618 P14618|P14618-3|B4DNK4 Pyruvate kinase PKM HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.2785.2785.3 12.35 12.35 1.103 2 1 1 0 459.903 1297.7286 S437s TMT10 434 (K) SGRsAHQVAR (Y) S(0.0)GRS(0.99)AHQVAR s:Phosphorylated S PKM 58506.4 1 15 502.1 291.2 HUMAN 1 17.434 21.491 VLTSKRASPNLFSEA-p Q9HC77;S260-p VLTSKRASPNLFSEA 0.868689771390984 0.00736694647520273 -0.025 -0.506666666666667 1.19395674067474 30.5000315116007 -0.025 -0.506666666666667 0.759633879499094 0.000891244471405982 -0.321846951117787 -6.57506243807545 Q9HC77 CENPJ Q9HC77.S260.p_CENPJ Q9HC77_S260s _1_1_260_260 Q9HC77 Q9HC77|F6VUX8|Q9HC77-2 Centromere protein J HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18771.18771.3 21.5 19.59 2.646 3 1 1 0 901.4568 2622.3928 S260s TMT10 258 (K) RAsPNLFSEAQYQEAPVEK (N) RAS(0.99)PNLFS(0.0)EAQY(0.0)QEAPVEK K:TMT10,s:Phosphorylated S CENPJ 154195.7 4 2 1877.1 109.56 HUMAN 1 -1.194 -30.5 VLTTMHRSLIGVDKF-p A0A1B0GTL5;S116-p VLTTMHRSLIGVDKF 0.342398361264446 0.706540487509364 0.173 -0.081 8.64711432823698 2.07275025059768 0.173 -0.081 0.136549013580162 0.620475981831229 1.74727723403296 -0.524791745871891 A0A1B0GTL5 NotFound A0A1B0GTL5.S116.p_NotFound A0A1B0GTL5_S116s _1_1_116_116 A0A1B0GTL5 A0A1B0GTL5|Q9BXF6 Rab11 family-interacting protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14050.14050.2 9.5 2.43 99 1 1 1 0 520.7834 960.5927 S116s Hydrogen 116 (R) sLIGVDK (F) S(1.0)LIGVDK K:TMT10-Lys-Only,s:Phosphorylated S RAB11FIP5 139038.8 1 1 714.1 238.09 HUMAN 1 8.6471 -2.0728 VLTVHPESKSKTKTR-p Q9H307;S552-p VLTVHPESKSKTKTR 0.961261717654481 0.664898904144811 0.00733333333333332 -0.0476666666666667 0.329168099403414 2.42568672959715 0.00733333333333332 -0.0476666666666667 0.927007376667756 0.572046492458032 0.0959582305734048 -0.601062342175601 Q9H307 PNN Q9H307.S552.p_PNN Q9H307_S552s _1_1_552_552 Q9H307 Q9H307|Q9H307-2 Pinin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.24916.24916.4 18.09 18.09 3.75 3 1 1 0 603.8381 2332.3528 S552s TMT10 537 (K) LTEVPVEPVLTVHPEsK (S) LT(0.0)EVPVEPVLT(0.0)VHPES(0.99)K K:TMT10,s:Phosphorylated S PNN 81726.4 5 10 180.1 480.36 HUMAN 1 0.3292 -2.4257 VLVKRRDSEEFGVKL-p O95049-3;S222-p VLVKRRDSEEFGVKL 0.777764453490353 0.574639099215714 -0.0556666666666667 0.0596666666666667 2.09693165241165 3.24434126797097 -0.0556666666666667 0.0596666666666667 0.617030788259689 0.473768163242853 -0.530162827925985 0.769505320996797 O95049 TJP3 O95049.3.S222.p_TJP3 O95049-3_S222s _1_1_222_222 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.7127.7127.4 7.14 7.14 99 1 1 1 0 440.9827 1680.9433 S222s TMT10 219 (K) RRDsEEFGVK (L) RRDS(1.0)EEFGVK K:TMT10,s:Phosphorylated S TJP3 103593.6 2 3 125.1 544.41 HUMAN 1 -2.0969 3.2443 VLVRNGGSFEDDLSL-p P28290;S111-p VLVRNGGSFEDDLSL 0.506520727045966 0.198556366300956 0.0926666666666667 0.131333333333333 5.45119794670765 9.2394685984688 0.0926666666666667 0.131333333333333 0.285023195842344 0.119138777698913 1.18613758800173 1.84913960556407 P28290 SSFA2 P28290.S111.p_SSFA2 P28290_S111s _1_1_111_111 P28290 P28290|P28290-3|E9PHV5 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23051.23051.4 20.11 15.69 1.142 3 1 1 0 1055.9979 4140.9933 S111s TMT10 108 (R) NGGsFEDDLSLGAEANHLHESDAQIENCNNILAK (E) NGGS(0.99)FEDDLS(0.0)LGAEANHLHES(0.0)DAQIENCNNILAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SSFA2 139638.7 6 4 73.1 652.35 HUMAN 1 5.4512 9.2395 VLVTGCDSGFGFSLA-p Q02338;S65-p VLVTGCDSGFGFSLA 0.300657590513664 0.0323955414791055 0.169 0.335666666666667 9.80137989106071 20.0985254887994 0.169 0.335666666666667 0.104679589501052 0.00977569067647401 1.94722312018474 3.89645794680261 Q02338 BDH1 Q02338.S65.p_BDH1 Q02338_S65s _1_1_65_65 Q02338 Q02338 D-beta-hydroxybutyrate dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30530.30530.3 15.94 15.94 3.88 3 1 1 0 756.3885 2187.1884 S65s TMT10 57 (K) AVLVTGCDsGFGFSLAK (H) AVLVT(0.0)GCDS(0.99)GFGFS(0.0)LAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BDH1 38555.8 1 1 4077.1 38.04 HUMAN 1 9.8014 20.0985 VLWQDSFSPHLKHHP-p Q5T1Z8;S55-p VLWQDSFSPHLKHHP 0.760204986871812 0.00453802773854958 0.0533333333333333 -0.74 2.28366098931835 34.3651477853277 0.0533333333333333 -0.74 0.591063173256483 0.00036600348567602 0.570743122354001 -7.86340243887974 Q5T1Z8 NotFound Q5T1Z8.S55.p_NotFound Q5T1Z8_S55s _1_1_55_55 Q5T1Z8 Q5T1Z8|Q5T1Z4|Q14671-3|Q14671-2|Q14671-4|E9PR38|E9PMX1|E9PM68 Pumilio homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.24689.24689.3 18.44 18.44 1.159 2 1 1 0 689.3685 1986.1213 S55s TMT10 47 (K) AVLWQDSFsPHLK (H) AVLWQDS(0.0)FS(0.99)PHLK K:TMT10,s:Phosphorylated S PUM1 130847.9 1 2 720.1 237.18 HUMAN 1 2.2837 -34.3651 VMAGRSISPWLARRT-p Q86UZ6;S168-p VMAGRSISPWLARRT 0.982842045127411 0.00941190170382178 0.00366666666666666 0.415 0.148197843193786 28.6022995661748 0.00366666666666667 0.415 0.966451836521734 0.0013796535519505 0.0440402331613225 6.00894212389526 Q86UZ6 ZBTB46 Q86UZ6.S168.p_ZBTB46 Q86UZ6_S168s _1_1_168_168 Q86UZ6 Q86UZ6 Zinc finger and BTB domain-containing protein 46 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21617.21617.2 13.03 6.61 2.461 2 1 1 0 619.8281 1158.6833 S168s TMT10 166 (R) SIsPWLAR (R) S(0.0)IS(0.99)PWLAR s:Phosphorylated S ZBTB46 64881 2 1 4044.1 38.67 HUMAN 1 0.1482 28.6023 VMCNRTSSPIPAQHA-p Q96EP0;S437-p VMCNRTSSPIPAQHA 0.334991410736759 0.196057108702102 0.175666666666667 0.131666666666667 8.86276252508529 9.30660787458686 0.175666666666667 0.131666666666667 0.129934280976453 0.117311128483993 1.78460665335279 1.86075767413335 Q96EP0 RNF31 Q96EP0.S437.p_RNF31 Q96EP0_S437s _1_1_437_437 Q96EP0 Q96EP0|Q96EP0-3 E3 ubiquitin-protein ligase RNF31 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.10411.10411.4 14.45 14.45 1.726 6 1 1 0 612.3148 2366.2666 S437s Hydrogen 435 (R) TSsPIPAQHAPRPYASSLEK (G) T(0.0)S(0.0)S(0.99)PIPAQHAPRPY(0.0)AS(0.0)S(0.0)LEK K:TMT10-Lys-Only,s:Phosphorylated S RNF31 122730.8 4 1 4325.1 33.53 HUMAN 1 8.8628 9.3066 VMDGGLESDGPNMTE-p P51116;S566-p VMDGGLESDGPNMTE 0.593686393732298 0.278160402326051 0.075 0.150333333333333 4.17574098514877 7.32211848877586 0.075 0.150333333333333 0.382319017534997 0.185262769105086 0.950577084794147 1.51685025932576 P51116 FXR2 P51116.S566.p_FXR2 P51116_S566s _1_1_566_566 P51116 P51116 Fragile X mental retardation syndrome-related protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13684.13701.5 22.53 21.95 3.885 5 1 1 0 803.9595 3935.7933 S566s TMT10 553 (R) TDEDRTVMDGGLEsDGPNMTENGLEDESRPQRR (N) T(0.0)DEDRT(0.0)VMDGGLES(0.99)DGPNMT(0.0)ENGLEDES(0.0)RPQRR s:Phosphorylated S FXR2 74564.3 6 5 844.1 213.98 HUMAN 1 4.1757 7.3221 VMDPLGGSDTAKGYN-p Q99536;S267-p VMDPLGGSDTAKGYN 0.630428117029153 0.164003325329151 -0.066 0.144333333333333 3.72739859972936 10.3243994598073 -0.066 0.144333333333333 0.42389680189223 0.09280258081903 -0.86464924254462 2.0372762462867 Q99536 VAT1 Q99536.S267.p_VAT1 Q99536_S267s _1_1_267_267 Q99536 Q99536|Q99536-3 Synaptic vesicle membrane protein VAT-1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26850.26850.3 11.2 11.2 1.4 2 1 1 0 705.0292 2033.0989 S267s TMT10 256 (K) GVDIVMDPLGGsDTAK (G) GVDIVMDPLGGS(0.99)DT(0.0)AK K:TMT10,s:Phosphorylated S VAT1 42147.7 1 1 6520.1 11.2 HUMAN 1 -3.7274 10.3244 VMEEVVITPPYQVEN-p Q3MHD2-2;T146-p VMEEVVITPPYQVEN 0.959929852412734 0.0800171976809406 -0.00766666666666667 0.246333333333333 0.343372338854043 14.5545406227192 -0.00766666666666667 0.246333333333333 0.923980415529767 0.0350385348536709 -0.0999529677281109 2.79355801256483 Q3MHD2 LSM12 Q3MHD2.2.T146.p_LSM12 Q3MHD2-2_T146t _1_1_146_146 Q3MHD2-2 K7ELG9|Q3MHD2-2 Isoform 2 of Protein LSM12 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30551.30551.4 12.39 12.39 4.612 2 1 1 0 725.6252 2819.5087 T146t TMT10 136 (K) NIVVMEEVVItPPYQVENCK (G) NIVVMEEVVIT(0.99)PPY(0.0)QVENCK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T LSM12 22283.9 3 2 3242.1 56.13 HUMAN 1 -0.3434 14.5545 VMEQLNNSFPSSRGR-p A0A087WTU7;S3665-p VMEQLNNSFPSSRGR 0.944295415632699 0.247241900424627 -0.016 0.116666666666667 0.491208133316484 7.99641922631565 -0.016 0.116666666666667 0.893057015916278 0.158620048147906 -0.140884926056081 1.63402175625048 A0A087WTU7 NotFound A0A087WTU7.S3665.p_NotFound A0A087WTU7_S3665s _1_1_3665_3665 A0A087WTU7 P11532|A0A075B6G3|A0A087WTU7|E9PDN5|A0A087WV90|P11532-4|P11532-2|P11532-3|E7ESB2|F8VX32|E7EQS5|F5GZY3|E7EQR9|P11532-6|P11532-5|P11532-7|P11532-8|P11532-9|P11532-10 Dystrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.35040.35040.5 25.53 25.53 1.75 11 1 1 0 942.232 4627.1501 S3665s TMT10 3630 (R) VVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNsFPSSR (G) VVGS(0.0)QT(0.0)S(0.0)DS(0.0)MGEEDLLS(0.0)PPQDT(0.0)S(0.0)T(0.0)GLEEVMEQLNNS(0.99)FPS(0.0)S(0.0)R s:Phosphorylated S DMD 428951.2 2 5 2745.1 71.99 HUMAN 1 -0.4912 7.9964 VMERALLSDERVLKE-p Q6P1M3;S982-p VMERALLSDERVLKE 0.081833793760253 0.885823436587636 -0.398333333333333 0.0176666666666667 23.2297181179079 0.740084431361899 -0.398333333333333 0.0176666666666667 0.0047536607893356 0.843318362619283 -4.60894356844231 0.207327589167045 Q6P1M3 LLGL2 Q6P1M3.S982.p_LLGL2 Q6P1M3_S982s _1_1_982_982 Q6P1M3 Q6P1M3|J3QRV5 Lethal(2) giant larvae protein homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18924.18924.3 9.75 5.38 99 1 1 1 0 561.327 1601.9991 S982s TMT10 979 (R) ALLsDERVLK (E) ALLS(1.0)DERVLK K:TMT10,s:Phosphorylated S LLGL2 114415.8 1 13 881.1 207.2 HUMAN 1 -23.2297 0.7401 VMERRAITPPVASPV-p Q8WVR3;T541-p VMERRAITPPVASPV 0.930978723493408 0.64765673124072 0.0133333333333333 0.046 0.615611147897699 2.57213457371285 0.0133333333333333 0.046 0.867838444734218 0.553078202382936 0.174469510133464 0.63200090740765 Q8WVR3 C7orf43 Q8WVR3.T541.p_C7orf43 Q8WVR3_T541t _1_1_541_541 Q8WVR3 Q8WVR3|B3KNS5|Q8WVR3-3|Q8WVR3-2 Uncharacterized protein C7orf43 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20531.20531.5 16.02 16.02 3.469 3 1 1 0 557.3224 2702.6122 T541t TMT10 538 (R) RAItPPVASPVGRPLYLPPDK (A) RAIT(0.99)PPVAS(0.0)PVGRPLY(0.0)LPPDK K:TMT10,t:Phosphorylated T C7orf43 63337.5 5 6 2386.1 85.59 HUMAN 1 0.6156 2.5721 VMGCFSDSPPQSPTF-p Q13085;S1259-p VMGCFSDSPPQSPTF 0.255903152682223 0.106275942801302 -0.303666666666667 -0.28 11.2464838356764 12.8626337140728 -0.303666666666667 -0.28 0.0750501589590673 0.0517293032171137 -2.19934877605978 -2.48499724147847 Q13085 ACACA Q13085.S1259.p_ACACA Q13085_S1259sS1263s_2_2_1259_1263 Q13085 Q13085-4|Q13085-2|Q13085-3 Acetyl-CoA carboxylase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33579.33579.4 25.03 25.03 1.215 7 2 2 0 1056.2105 4061.8825 S1259s S1263s TMT10 1248 (R) IFDEVMGCFSDsPPQsPTFPEAGHTSLYDEDK (V) IFDEVMGCFS(0.0)DS(0.99)PPQS(0.99)PT(0.0)FPEAGHT(0.0)S(0.0)LY(0.0)DEDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ACACA 267260.7 6 14 860.1 210.55 HUMAN 1 -11.2465 -12.8626 VMGNNAVSPYQQVIE-p P60228;S399-p VMGNNAVSPYQQVIE 0.891062470744815 0.739559905572589 -0.02 -0.0353333333333333 0.977973914918211 1.80659112711844 -0.02 -0.0353333333333333 0.79836705726021 0.65969149844117 -0.268344253554102 -0.465478905410949 P60228 EIF3E P60228.S399.p_EIF3E P60228_S399s _1_1_399_399 P60228 P60228|E5RGA2 Eukaryotic translation initiation factor 3 subunit E HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21780.21780.3 22.45 22.45 3.539 2 1 1 0 907.8126 2641.4536 S399s TMT10 388 (K) LGHVVMGNNAVsPYQQVIEK (T) LGHVVMGNNAVS(0.99)PY(0.0)QQVIEK K:TMT10,s:Phosphorylated S EIF3E 52619.2 6 2 2988.1 63.95 HUMAN 1 -0.978 -1.8066 VMGRRSLSPQEDALT-p Q96EN8;S530-p VMGRRSLSPQEDALT 0.879897888357523 0.244810464947676 -0.0223333333333333 -0.19 1.09244023408892 8.05288366843891 -0.0223333333333333 -0.19 0.777599507029672 0.156571110962416 -0.296908013010068 -1.6438086430899 Q96EN8 MOCOS Q96EN8.S530.p_MOCOS Q96EN8_S530s _1_1_530_530 Q96EN8 Q96EN8 Molybdenum cofactor sulfurase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13975.13975.3 11.64 11.64 2.391 4 1 1 0 557.2719 1589.8332 S530s TMT10 528 (R) SLsPQEDALTGSR (V) S(0.0)LS(0.99)PQEDALT(0.0)GS(0.0)R s:Phosphorylated S MOCOS 99145 2 1 5512.1 18.64 HUMAN 1 -1.0924 -8.0529 VMLMASPSMEDLYHK-p Q8IX12;S456-p VMLMASPSMEDLYHK 0.815184034274445 0.045747433537038 0.034 0.260666666666667 1.70375747292054 17.9238301545405 0.034 0.260666666666667 0.675498288055147 0.0161293544020053 0.442149504846722 3.44406184135097 Q8IX12 CCAR1 Q8IX12.S456.p_CCAR1 Q8IX12_S456s _1_1_456_456 Q8IX12 Q8IX12|Q8IX12-2|F5H3E1 Cell division cycle and apoptosis regulator protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.25938.25938.3 19.07 19.07 2.289 3 1 1 0 764.0406 2210.1424 S456s TMT10 449 (K) VMLMASPsMEDLYHK (S) VMLMAS(0.0)PS(0.99)MEDLY(0.0)HK K:TMT10,s:Phosphorylated S CCAR1 133503.3 8 2 1111.1 176.02 HUMAN 1 1.7038 17.9238 VMLQNGETPKDLNDE-p F5GWX5;T1672-p VMLQNGETPKDLNDE 0.141525291296506 0.0123824029349833 -0.365333333333333 -0.442666666666667 17.3674570567503 26.6180288454369 -0.365333333333334 -0.442666666666667 0.0183338761952025 0.00217869840495934 -3.33536272239169 -5.45820130244079 F5GWX5 CHD4 F5GWX5.T1672.p_CHD4 F5GWX5_T1672t _1_1_1672_1672 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16367.16367.4 18.28 16.15 99 1 1 1 0 682.6028 2647.4216 T1672t TMT10 1664 (K) EVMLQNGEtPKDLNDEK (Q) EVMLQNGET(1.0)PKDLNDEK K:TMT10,t:Phosphorylated T CHD4 218583 2 26 49.1 753.68 HUMAN 1 -17.3675 -26.618 VMRLSDLSTEDDDSG-p Q5BJF6-4;S104-p VMRLSDLSTEDDDSG 0.260407038253762 0.103638878616272 0.168333333333333 0.238333333333333 11.0714002008901 13.0034336712932 0.168333333333333 0.238333333333333 0.0781375842018059 0.0500791135550183 2.16862278876829 2.51030792694646 Q5BJF6 ODF2 Q5BJF6.4.S104.p_ODF2 Q5BJF6-4_S101sS104sT105t_3_3_101_105 Q5BJF6-4 Q5BJF6-4|Q5BJF6-3|Q5BJF6-2|Q5BJF6-7|Q5BJF6-6|Q5BJF6-10 Isoform 4 of Outer dense fiber protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24813.24813.4 13.52 13.52 1.204 5 3 3 0 766.3325 2822.4065 S101s S104s T105t TMT10 94 (K) LVSVMRLsDLstEDDDSGHCK (M) LVS(0.0)VMRLS(0.99)DLS(0.99)T(0.99)EDDDS(0.0)GHCK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,t:Phosphorylated T ODF2 96031.2 1 16 853.1 211.96 HUMAN 1 11.0714 13.0034 VMVRERESFLAPSSG-p Q14126;S1021-p VMVRERESFLAPSSG 0.863414912287134 0.94924117422314 0.0293333333333333 -0.00666666666666662 1.24414853017903 0.324391373618363 0.0293333333333333 -0.00666666666666662 0.750905260801474 0.928027536095968 0.334046989509292 -0.0946036087812857 Q14126 DSG2 Q14126.S1021.p_DSG2 Q14126_S1021s _1_1_1021_1021 Q14126 Q14126 Desmoglein-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.27020.27020.4 20.96 20.96 5.912 6 1 1 0 927.7231 3627.9002 S1021s TMT10 1018 (R) EREsFLAPSSGVQPTLAMPNIAVGQNVTVTER (V) ERES(0.99)FLAPS(0.0)S(0.0)GVQPT(0.0)LAMPNIAVGQNVT(0.0)VT(0.0)ER s:Phosphorylated S DSG2 123090.5 2 11 494.1 293.66 HUMAN 1 1.2441 -0.3244 VNAGRKGSLAALYDL-p Q6P4R8;S298-p VNAGRKGSLAALYDL 0.742163837330897 0.0134399239574354 0.0563333333333333 0.580666666666667 2.45968248462159 26.0241222341986 0.0563333333333333 0.580666666666667 0.567586100462073 0.00249797321110876 0.608356238687266 5.30094769295512 Q6P4R8 NFRKB Q6P4R8.S298.p_NFRKB Q6P4R8_S298s _1_1_298_298 Q6P4R8 Q6P4R8-2|Q6P4R8-3 Nuclear factor related to kappa-B-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.31371.31371.4 17.33 16.26 9.014 2 1 1 0 558.0856 2149.3563 S298s TMT10 296 (R) KGsLAALYDLAVLK (K) KGS(0.99)LAALY(0.0)DLAVLK K:TMT10,s:Phosphorylated S NFRKB 139455.1 6 3 791.1 224.91 HUMAN 1 2.4597 26.0241 VNANQNASPNVPGKR-p Q8IWI9-4;S607-p VNANQNASPNVPGKR 0.951372237644943 0.00273649503124045 0.013 -0.665 0.428505717526801 38.8763195979978 0.013 -0.665 0.906044291069399 0.000129529306464548 0.123664932246257 -9.63725425341325 Q8IWI9 MGA Q8IWI9.4.S607.p_MGA Q8IWI9-4_S607s _1_1_607_607 Q8IWI9-4 Q8IWI9-4|Q8IWI9-3 Isoform 4 of MAX gene-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.12829.12829.3 14.73 11.69 99 1 1 1 0 683.0298 1967.1074 S607s TMT10 599 (K) VVNANQNAsPNVPGK (R) VVNANQNAS(1.0)PNVPGK K:TMT10,s:Phosphorylated S MGA 338321.5 5 5 141.1 523.06 HUMAN 1 0.4285 -38.8763 VNDAEPGSPEAPQGK-p Q8N8A6;S83-p VNDAEPGSPEAPQGK 0.163112003195483 0.3623930306885 0.229666666666667 -0.0943333333333333 15.7790804677022 5.84791938217124 0.229666666666667 -0.0943333333333334 0.0264296829412122 0.260140554594279 3.0258854151519 -1.25713191896081 Q8N8A6 DDX51 Q8N8A6.S83.p_DDX51 Q8N8A6_S83s _1_1_83_83 Q8N8A6 Q8N8A6 ATP-dependent RNA helicase DDX51 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7279.7279.3 18.76 18.76 99 1 1 1 0 730.7041 2110.1293 S83s TMT10 75 (R) RVNDAEPGsPEAPQGK (R) RVNDAEPGS(1.0)PEAPQGK K:TMT10,s:Phosphorylated S DDX51 73026.6 20 1 1164.1 170.94 HUMAN 1 15.7791 -5.8479 VNDMWPGSPQEKDSP-p Q9BUV0;S12-p VNDMWPGSPQEKDSP 0.330502159760853 0.942309811585179 -0.184333333333333 0.00800000000000004 8.98536452829859 0.368950812275304 -0.184333333333333 0.00800000000000005 0.126317507381967 0.918554478114738 -1.80582930470906 0.10710856533081 Q9BUV0 RSRP1 Q9BUV0.S12.p_RSRP1 Q9BUV0_S12s _1_1_12_12 Q9BUV0 Q9BUV0|Q9BUV0-2|Q9BUV0-3|H3BTJ0 Arginine/serine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25061.25061.3 18.89 18.89 5.95 3 1 1 0 701.6428 2022.9429 S12s Acetyl 2 (M) SNYVNDMWPGsPQEK (D) S(0.0)NY(0.0)VNDMWPGS(0.99)PQEK K:TMT10,s:Phosphorylated S RSRP1 33669.8 2 1 2709.1 73.23 HUMAN 1 -8.9854 0.369 VNEKTIGSPPNEFYC-p Q8NB14;S680-p VNEKTIGSPPNEFYC 0.954596144642738 0.185868368884823 0.012 -0.155 0.395635222296569 9.61050087404726 0.012 -0.155 0.912927895819077 0.109383020699999 0.1145557895516 -1.91337318981206 Q8NB14 USP38 Q8NB14.S680.p_USP38 Q8NB14_S680s _1_1_680_680 Q8NB14 Q8NB14 Ubiquitin carboxyl-terminal hydrolase 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18916.18916.3 22.67 16.68 3.133 7 1 1 0 1037.1462 3029.4563 S680s TMT10 677 (K) TIGsPPNEFYCSENTSVPNESNK (I) T(0.0)IGS(0.99)PPNEFY(0.0)CS(0.0)ENT(0.0)S(0.0)VPNES(0.0)NK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S USP38 117913.3 1 1 5124.1 22.67 HUMAN 1 0.3956 -9.6105 VNETATASDSKGTSN-p O15014;S390-p VNETATASDSKGTSN 0.171753109345633 0.347291864861602 0.416 0.0966666666666667 15.2336044483417 6.08927512650455 0.416 0.0966666666666667 0.0299667438201664 0.246077829417125 2.92237979620169 1.30013801107164 O15014 ZNF609 O15014.S390.p_ZNF609 O15014_S390s _1_1_390_390 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7975.7975.3 13.88 13.88 1.227 6 1 1 0 853.4167 2478.2659 S390s TMT10 375 (R) MRPNSNTPVNETATAsDSK (G) MRPNS(0.0)NT(0.0)PVNET(0.0)AT(0.0)AS(0.99)DS(0.0)K K:TMT10,s:Phosphorylated S ZNF609 152443.5 2 7 63.1 699.07 HUMAN 1 15.2336 6.0893 VNFSKVLSTLLAVNK-p Q15052;S101-p VNFSKVLSTLLAVNK 0.560135693219576 0.0719209774521856 -0.101 -0.270666666666667 4.64237360193395 15.1921488306214 -0.101 -0.270666666666667 0.343370230339589 0.0302541612254647 -1.03809368488474 -2.91263658196348 Q15052 ARHGEF6 Q15052.S101.p_ARHGEF6 Q15052_S101s _1_1_101_101 Q15052 Q15052 Rho guanine nucleotide exchange factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.32257.32257.2 13.49 10.72 1.144 2 1 1 0 798.4811 1515.9874 S101s TMT10 99 (K) VLsTLLAVNK (A) VLS(0.99)T(0.0)LLAVNK K:TMT10,s:Phosphorylated S ARHGEF6 88752.5 2 15 434.2 313.68 HUMAN 1 -4.6424 -15.1921 VNGAINDTESVDSLS-p Q86XZ4;T141-p VNGAINDTESVDSLS 0.978588331593317 0.246900105530861 -0.00433333333333334 0.125 0.185864125424097 8.00411783137714 -0.00433333333333334 0.125 0.958106060838014 0.158339116327378 -0.0550079115495471 1.63535631517583 Q86XZ4 SPATS2 Q86XZ4.T141.p_SPATS2 Q86XZ4_T141tS143s_2_2_141_143 Q86XZ4 Q86XZ4|F8VS10 Spermatogenesis-associated serine-rich protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.29337.29337.4 9.12 9.12 1.335 7 2 2 0 953.6765 3650.7442 N139n T141t S143s TMT10 127 (K) GGMNGYHVNGAInDtEsVDSLSEGLETLSIDAR (E) GGMN(0.0)GY(0.0)HVN(0.0)GAIN(0.99)DT(0.99)ES(0.99)VDS(0.0)LS(0.0)EGLET(0.0)LS(0.0)IDAR n:Deamidated,t:Phosphorylated T,s:Phosphorylated S SPATS2 59886 4 5 3545.1 48.53 HUMAN 1 -0.1859 8.0041 VNGAPRDSLAAASGV-p Q9Y5Y0;S56-p VNGAPRDSLAAASGV 0.665261908909664 0.836687204559897 0.119333333333333 0.0256666666666667 3.31136032927721 1.08794880186576 0.119333333333333 0.0256666666666667 0.466513232703774 0.778404109027721 0.782973687738084 0.295766768107848 Q9Y5Y0 FLVCR1 Q9Y5Y0.S56.p_FLVCR1 Q9Y5Y0_S56s_1_1_56_56 Q9Y5Y0 Q9Y5Y0 Feline leukemia virus subgroup C receptor-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.24859.24859.4 21.73 17.76 1.13 5 1 1 0 986.4914 3861.9933 N50n S56s TMT10 44 (K) AGTFPVnGAPRDsLAAASGVLGGPQTPLAPEEETQAR (L) AGT(0.0)FPVN(1.0)GAPRDS(0.99)LAAAS(0.0)GVLGGPQT(0.0)PLAPEEET(0.0)QAR n:Deamidated,s:Phosphorylated S FLVCR1 60318.2 2 1 4184.1 35.77 HUMAN 1 3.3114 1.0879 VNGEVPATPVKRERS-p Q8IUW5;T261-p VNGEVPATPVKRERS 0.991625794245442 0.0016237919479163 -0.002 -0.876 0.0774251366614155 44.535597449318 -0.002 -0.876 0.982330178439919 3.51917006749966e-05 -0.0231895780962768 -12.3723977596293 Q8IUW5 RELL1 Q8IUW5.T261.p_RELL1 Q8IUW5_T261t_1_1_261_261 Q8IUW5 Q8IUW5 RELT-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19196.19196.3 20.67 18.14 2.434 5 1 1 0 923.486 2687.4802 N255n T261t TMT10 244 (R) SLMSVSGAETVnGEVPAtPVKR (E) S(0.0)LMS(0.0)VS(0.0)GAET(0.0)VN(1.0)GEVPAT(0.99)PVKR K:TMT10,n:Deamidated,t:Phosphorylated T RELL1 29624.9 8 6 2329.1 87.71 HUMAN 1 -0.0774 -44.5356 VNGQRRDSRSTVFRI-p P50851;S1299-p VNGQRRDSRSTVFRI 0.960230191181073 0.0180501591213868 -0.00966666666666667 0.640333333333333 0.340834137562034 24.0088109561012 -0.00966666666666667 0.640333333333333 0.924520586737805 0.00397300310429126 -0.0992399575696553 4.79136697417203 P50851 LRBA P50851.S1299.p_LRBA P50851_S1299s _1_1_1299_1299 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4071.4071.3 10.09 8.36 9.411 3 1 1 0 478.2466 1352.7596 S1299s TMT10 1297 (R) RDsRSTVFR (I) RDS(0.99)RS(0.0)T(0.0)VFR s:Phosphorylated S LRBA 321783.7 2 13 74.1 649.16 HUMAN 1 -0.3408 24.0088 VNGVCASTPPLTPIK-p Q9UJM3;T127-p VNGVCASTPPLTPIK 0.889554663153291 0.00210285200041402 0.0703333333333333 -1.00333333333333 0.992388958050816 41.6361092679307 0.0703333333333333 -1.00333333333333 0.795721521169344 6.86102612811433e-05 0.271968186574977 -10.8923095341245 Q9UJM3 ERRFI1 Q9UJM3.T127.p_ERRFI1 Q9UJM3_T127t _1_1_127_127 Q9UJM3 Q9UJM3 ERBB receptor feedback inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22253.22253.3 17.7 17.7 1.107 4 1 1 0 888.5098 2583.5511 T127t TMT10 117 (K) KLTVNGVCAStPPLTPIK (N) KLT(0.0)VNGVCAS(0.0)T(0.99)PPLT(0.0)PIK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ERRFI1 51186.7 2 1 1507.1 135.54 HUMAN 1 0.9924 -41.6361 VNGWEQVSPVSVDKV-p Q5THJ4;S2983-p VNGWEQVSPVSVDKV 0.0825441086817992 0.0117001256384837 -0.347333333333333 -0.570666666666667 23.1530879024255 27.0156579217327 -0.347333333333333 -0.570666666666667 0.00483828235732383 0.00198808160896953 -4.59071081848988 -5.56538493876027 Q5THJ4 VPS13D Q5THJ4.S2983.p_VPS13D Q5THJ4_S2983s _1_1_2983_2983 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.20696.20696.3 11.9 11.9 4.301 2 1 1 0 694.6948 2002.101 S2983s TMT10 2976 (R) VNGWEQVsPVSVDK (V) VNGWEQVS(0.99)PVS(0.0)VDK K:TMT10,s:Phosphorylated S VPS13D 495672.3 1 22 124.1 545.31 HUMAN 1 -23.1531 -27.0157 VNIGGAGSYIYEKPL-p P52943;S74-p VNIGGAGSYIYEKPL 0.337401879770565 0.217546836993083 -0.229 0.201333333333333 8.78868223504331 8.71719759051245 -0.229 0.201333333333333 0.132169661125171 0.134363169828721 -1.77178349928256 1.75879832800509 P52943 CRIP2 P52943.S74.p_CRIP2 P52943_S74s _1_1_74_74 P52943 P52943-2 Cysteine-rich protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27859.27859.4 19.63 19.63 4.458 4 1 1 0 937.9982 3669.0052 S74s TMT10 66 (K) GVNIGGAGsYIYEKPLAEGPQVTGPIEVPAAR (A) GVNIGGAGS(0.99)Y(0.0)IY(0.0)EKPLAEGPQVT(0.0)GPIEVPAAR K:TMT10,s:Phosphorylated S CRIP2 23291.1 4 2 1870.1 109.93 HUMAN 1 -8.7887 8.7172 VNKHNVHSPYKCTIC-p Q96JM3;S736-p VNKHNVHSPYKCTIC 0.86718333213857 0.0102907900139851 0.041 -0.405666666666667 1.20563114514903 27.904383115149 0.041 -0.405666666666667 0.757594626258708 0.00162017411192893 0.324692170495126 -5.81063934321264 Q96JM3 CHAMP1 Q96JM3.S736.p_CHAMP1 Q96JM3_S736s _1_1_736_736 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.3773.3773.3 12.38 12.38 7.558 2 1 1 0 507.2659 1439.816 S736s TMT10 732 (K) HNVHsPYK (C) HNVHS(0.99)PY(0.0)K K:TMT10,s:Phosphorylated S CHAMP1 90067.4 1 37 25.1 950.05 HUMAN 1 1.2056 -27.9044 VNKVRRVSFADPIYQ-p Q5UIP0;S2205-p VNKVRRVSFADPIYQ 0.361131241199818 0.0282408162957829 -0.198333333333333 -0.508333333333333 8.22040473481521 20.9920563785215 -0.198333333333333 -0.508333333333333 0.150646666653969 0.00795782459273154 -1.67337482797468 -4.09109252631836 Q5UIP0 RIF1 Q5UIP0.S2205.p_RIF1 Q5UIP0_S2205s _1_1_2205_2205 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21661.21661.4 15.23 15.23 5.609 2 1 1 0 647.5766 2507.3204 S2205s TMT10 2203 (R) RVsFADPIYQAGLADDIDRR (C) RVS(0.99)FADPIY(0.0)QAGLADDIDRR s:Phosphorylated S RIF1 276628.8 1 31 29.1 922.06 HUMAN 1 -8.2204 -20.9921 VNLADPRTPTAPAVN-p Q9UQ35;T2289-p VNLADPRTPTAPAVN 0.725445331242569 0.0805685607186902 -0.0556666666666667 -0.208 2.64237675869864 14.5074169942856 -0.0556666666666667 -0.208 0.544204744991721 0.0354207946827685 -0.646789463846019 -2.78482269860105 Q9UQ35 SRRM2 Q9UQ35.T2289.p_SRRM2 Q9UQ35_T2289t _1_1_2289_2289 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20808.20808.4 23.69 23.69 1.966 4 1 1 0 728.3905 2830.5737 T2289t TMT10 2275 (R) TAVAPSAVNLADPRtPTAPAVNLAGAR (T) T(0.0)AVAPS(0.0)AVNLADPRT(0.99)PT(0.0)APAVNLAGAR t:Phosphorylated T SRRM2 300351.7 4 145 2.1 3310.34 HUMAN 1 -2.6424 -14.5074 VNLAGARTPAALAAL-p Q9UQ35;T2302-p VNLAGARTPAALAAL 0.181080338359562 0.0861503335109284 0.293666666666667 0.276 14.6337473978465 14.0944900370202 0.293666666666667 0.276 0.0344052929610446 0.0389539045984534 2.81003826664549 2.7086453920445 Q9UQ35 SRRM2 Q9UQ35.T2302.p_SRRM2 Q9UQ35_T2302t _1_1_2302_2302 Q9UQ35 Q9UQ35 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27532.27532.5 29.64 24.18 6.16 12 1 1 0 818.427 4008.1352 T2302t TMT10 2289 (R) TPTAPAVNLAGARtPAALAALSLTGSGTPPTAANYPSSSR (T) T(0.0)PT(0.0)APAVNLAGART(0.99)PAALAALS(0.0)LT(0.0)GS(0.0)GT(0.0)PPT(0.0)AANY(0.0)PS(0.0)S(0.0)S(0.0)R t:Phosphorylated T SRRM2 300351.7 2 146 2.1 3310.34 HUMAN 1 14.6337 14.0945 VNLFPGLSPSALKAK-p Q9C0C2;S1652-p VNLFPGLSPSALKAK 0.979213683234262 0.00292573679022132 -0.005 -0.675666666666667 0.180272052913748 38.2287478353436 -0.00499999999999999 -0.675666666666667 0.959340534145781 0.000150357541682098 -0.0533851608189742 -9.36252351348412 Q9C0C2 TNKS1BP1 Q9C0C2.S1652.p_TNKS1BP1 Q9C0C2_S1652s _1_1_1652_1652 Q9C0C2 Q9C0C2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.32169.32773.3 16.26 16.26 3.785 2 1 1 0 627.6931 1801.0988 S1652s TMT10 1645 (K) VNLFPGLsPSALK (A) VNLFPGLS(0.99)PS(0.0)ALK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 8 67 4.1 2105.7 HUMAN 1 -0.1803 -38.2287 VNLSRKESDIRPSKL-p O94851;S515-p VNLSRKESDIRPSKL 0.266431557797534 0.0128203371952922 -0.220333333333333 -0.406 10.8839142871645 26.3624806571609 -0.220333333333333 -0.406 0.081584671893049 0.00231074453338926 -2.135784254829 -5.39012572402885 O94851 MICAL2 O94851.S515.p_MICAL2 O94851_S515s _1_1_515_515 O94851 O94851|O94851-3|O94851-4|O94851-6|O94851-5|O94851-2 [F-actin]-monooxygenase MICAL2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7185.7185.4 10.92 5.09 9.305 2 1 1 0 457.5144 1747.0681 S515s TMT10 513 (R) KEsDIRPSK (L) KES(0.99)DIRPS(0.0)K K:TMT10,s:Phosphorylated S MICAL2 128170.1 4 1 6562.1 10.92 HUMAN 1 -10.8839 -26.3625 VNLWKSDSSLETMEN-p Q9Y2H2;S829-p VNLWKSDSSLETMEN 0.15636344485557 0.462663228122581 -0.356333333333333 0.0796666666666667 16.1728077586693 4.46351814982997 -0.356333333333333 0.0796666666666667 0.0241389971876733 0.357806466397798 -3.10144187358514 1.00457272573405 Q9Y2H2 INPP5F Q9Y2H2.S829.p_INPP5F Q9Y2H2_S829sS830s_2_2_829_830 Q9Y2H2 Q9Y2H2|Q9Y2H2-4 Phosphatidylinositide phosphatase SAC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28101.28101.3 12.62 12.62 1.158 5 2 2 0 1077.851 3071.5996 S829s S830s TMT10 822 (K) VNLWKSDssLETMENTGVMDK (V) VNLWKS(0.0)DS(0.99)S(0.99)LET(0.0)MENT(0.0)GVMDK K:TMT10,s:Phosphorylated S INPP5F 129431.7 1 8 928.1 199.49 HUMAN 1 -16.1728 4.4635 VNLYRSESLQQNLLH-p Q9Y2Q0;S1126-p VNLYRSESLQQNLLH 0.367571861538115 0.750193167117678 0.136333333333333 0.0396666666666667 8.06802924765742 1.72550162900611 0.136333333333333 0.0396666666666667 0.156026036104996 0.672124671306526 1.64695985473987 0.44706678952548 Q9Y2Q0 ATP8A1 Q9Y2Q0.S1126.p_ATP8A1 Q9Y2Q0_S1126s _1_1_1126_1126 Q9Y2Q0 Q9Y2Q0|Q9Y2Q0-2|Q9Y2Q0-3 Phospholipid-transporting ATPase IA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.25925.25925.3 25.02 25.02 1.265 6 1 1 0 1186.5775 3477.7448 S1126s TMT10 1124 (R) SEsLQQNLLHGYAFSQDENGIVSQSEVIR (A) S(0.0)ES(0.99)LQQNLLHGY(0.0)AFS(0.0)QDENGIVS(0.0)QS(0.0)EVIR s:Phosphorylated S ATP8A1 132679.2 2 2 3106.1 60.5 HUMAN 1 8.068 1.7255 VNMGNVPSPNAPLKR-p Q8NFA0;S627-p VNMGNVPSPNAPLKR 0.176433174076321 0.553960720854047 0.222 -0.0973333333333333 14.9542522441845 3.45577141702819 0.222 -0.0973333333333333 0.0319576455504102 0.451255863747851 2.86987553795349 -0.811433021825816 Q8NFA0 USP32 Q8NFA0.S627.p_USP32 Q8NFA0_S627s_1_1_627_627 Q8NFA0 Q8NFA0|K7EQL6 Ubiquitin carboxyl-terminal hydrolase 32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22187.22187.4 13.55 13.55 0.214 3 1 1 0 748.3954 2909.582 N621n S627s TMT10 613 (R) TQQSNIWVnMGNVPsPNAPLKR (V) T(0.0)QQS(0.0)N(0.0)IWVN(0.50)MGN(0.50)VPS(0.99)PN(0.0)APLKR K:TMT10,n:Deamidated,s:Phosphorylated S USP32 183934.5 1 2 1352.1 150.83 HUMAN 1 14.9543 -3.4558 VNNLPERSPTDSPRE-p P49454;S3175-p VNNLPERSPTDSPRE 0.822453248768508 0.00272422972588299 0.0426666666666667 -0.68 1.63304468801458 38.9549703541339 0.0426666666666667 -0.68 0.686586928961127 0.000127204643331588 0.425911278616319 -9.67111287316907 P49454 CENPF P49454.S3175.p_CENPF P49454_S3175s _1_1_3175_3175 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11027.11027.4 17.26 11.96 1.368 4 1 1 0 658.089 2549.3633 S3175s TMT10 3165 (K) SVPVNNLPERsPTDSPREGLR (V) S(0.0)VPVNNLPERS(0.99)PT(0.0)DS(0.0)PREGLR s:Phosphorylated S CENPF 371067.2 6 34 47.1 771.73 HUMAN 1 1.633 -38.955 VNPLIPESPEEEELF-p Q9Y305-4;S232-p VNPLIPESPEEEELF 0.827721689148675 0.892454775456024 0.0483333333333333 0.022 1.57920812637617 0.694046384434976 0.0483333333333334 0.022 0.695151056846873 0.852305638485365 0.413457716562205 0.195249783259022 Q9Y305 ACOT9 Q9Y305.4.S232.p_ACOT9 Q9Y305-4_S232s _1_1_232_232 Q9Y305-4 Q9Y305-4|Q9Y305-2|Q9Y305-3 Isoform 4 of Acyl-coenzyme A thioesterase 9, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33835.33835.3 12.15 12.15 99 1 1 1 0 860.4259 2499.2969 S232s TMT10 221 (K) GPAFVNPLIPEsPEEEELFR (Q) GPAFVNPLIPES(1.0)PEEEELFR s:Phosphorylated S ACOT9 51306.3 1 1 5030.1 23.74 HUMAN 1 1.5792 0.694 VNPMFRGYAQQDTQE-p Q9Y2K6;Y227-p VNPMFRGYAQQDTQE 0.699517361828283 0.038216839484939 -0.0566666666666667 -0.377666666666667 2.91714296491174 19.0460825037063 -0.0566666666666667 -0.377666666666667 0.510840949570837 0.0124563771628466 -0.703532263673131 -3.67392353024471 Q9Y2K6 USP20 Q9Y2K6.Y227.p_USP20 Q9Y2K6_Y227y _1_1_227_227 Q9Y2K6 Q9Y2K6 Ubiquitin carboxyl-terminal hydrolase 20 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.16821.16857.2 24.05 16.14 8.16 2 1 1 0 882.9123 1684.8492 Y227y TMT10 226 (R) GyAQQDTQEFLR (C) GY(0.99)AQQDT(0.0)QEFLR y:Phosphorylated Y USP20 103827 5 1 133.1 24.05 HUMAN 1 -2.9171 -19.0461 VNPNMYQSPPQWVDH-p Q15650;S387-p VNPNMYQSPPQWVDH 0.91995668172231 0.460364799984252 0.018 -0.124333333333333 0.707478211101774 4.49266262416611 0.018 -0.124333333333333 0.849673706204577 0.355413350722371 0.198802116065749 -1.0100197333864 Q15650 TRIP4 Q15650.S387.p_TRIP4 Q15650_S387s_1_1_387_387 Q15650 Q15650 Activating signal cointegrator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26106.26106.4 14.71 12.51 2.685 6 1 1 0 1066.5497 4182.1897 N383n S387s TMT10 371 (R) SSEEPLGVLVNPnMYQsPPQWVDHTGAASQKK (A) S(0.0)S(0.0)EEPLGVLVN(0.0)PN(0.99)MY(0.0)QS(0.99)PPQWVDHT(0.0)GAAS(0.0)QKK K:TMT10,n:Deamidated,s:Phosphorylated S TRIP4 67000.8 2 2 3997.1 39.45 HUMAN 1 0.7075 -4.4927 VNPVQALSEFKAMDS-p P35221;S898-p VNPVQALSEFKAMDS 0.702900062830749 0.629602123155988 0.0636666666666667 0.0586666666666667 2.8771792867592 2.73185210420145 0.0636666666666667 0.0586666666666667 0.515563390792178 0.533107496512134 0.695353681880943 0.665312869027618 P35221 CTNNA1 P35221.S898.p_CTNNA1 P35221_S898s _1_1_898_898 P35221 P35221-2|P35221-3 Catenin alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21688.21688.3 15.47 15.47 99 1 1 1 0 636.3453 1827.0529 S898s TMT10 890 (K) HVNPVQALsEFK (A) HVNPVQALS(1.0)EFK K:TMT10,s:Phosphorylated S CTNNA1 100754.2 1 25 169.1 491.55 HUMAN 1 2.8772 2.7319 VNQKAAESLADPTEY-p P35606;S787-p VNQKAAESLADPTEY 0.8286411774081 0.952589514066416 0.0376666666666667 0.00733333333333335 1.56830206315162 0.299312060704037 0.0376666666666666 0.00733333333333336 0.696898923530895 0.933402143605384 0.410925140556409 0.0875167494935869 P35606 COPB2 P35606.S787.p_COPB2 P35606_S787s _1_1_787_787 P35606 P35606|P35606-2 Coatomer subunit beta' HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.32703.32703.3 16.35 11.53 2.515 3 1 1 0 868.4437 2523.3383 S787s TMT10 784 (K) AAEsLADPTEYENLFPGLK (E) AAES(0.99)LADPT(0.0)EY(0.0)ENLFPGLK K:TMT10,s:Phosphorylated S COPB2 103341.1 1 2 2300.1 89.13 HUMAN 1 1.5683 0.2993 VNRLNWSSIEQSQFS-p Q9P0K8;S435-p VNRLNWSSIEQSQFS 0.806340238065947 0.122736410600257 0.0386666666666667 0.165666666666667 1.80169655002456 12.0161007853273 0.0386666666666667 0.165666666666667 0.660435401768531 0.0628622500003064 0.464424276973946 2.33402431349712 Q9P0K8 FOXJ2 Q9P0K8.S435.p_FOXJ2 Q9P0K8_S435s _1_1_435_435 Q9P0K8 Q9P0K8|Q9P0K8-2 Forkhead box protein J2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.37328.37328.3 17.31 17.31 1.103 5 1 1 0 865.0782 2513.2544 S435s TMT10 431 (R) LNWSsIEQSQFSELMESLR (Q) LNWS(0.0)S(0.99)IEQS(0.0)QFS(0.0)ELMES(0.0)LR s:Phosphorylated S FOXJ2 62850.1 4 4 3158.1 59.06 HUMAN 1 1.8017 12.0161 VNRRRHNSSDGFDSA-p D4PHA4;S49-p VNRRRHNSSDGFDSA 0.962071129402723 0.0546575861182109 -0.007 -0.287666666666667 0.323944872493776 16.8265216606785 -0.007 -0.287666666666667 0.92812295214593 0.0207657601710903 -0.0944864454029103 -3.2261174257577 D4PHA4 GPBP1 D4PHA4.S49.p_GPBP1 D4PHA4_S49s _1_1_49_49 D4PHA4 D4PHA4|Q86WP2-2|Q86WP2-3 GC-rich promoter binding protein 1, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7912.7912.4 19.9 14.75 1.181 3 1 1 0 657.5568 2547.2399 S49s TMT10 46 (R) RHNsSDGFDSAIGRPNGGNFGR (K) RHNS(0.99)S(0.0)DGFDS(0.0)AIGRPNGGNFGR s:Phosphorylated S GPBP1 55695.9 5 2 1428.1 143.61 HUMAN 1 -0.3239 -16.8265 VNRSMTGSPRSSSES-p P41182;S457-p VNRSMTGSPRSSSES 0.039271926938295 0.0166675499222752 0.572666666666667 0.525 31.7717054093998 24.5522108002011 0.572666666666667 0.525 0.000665011964681363 0.00350573367200202 6.98981185195562 4.9252479639411 P41182 BCL6 P41182.S457.p_BCL6 P41182_S457s _1_1_457_457 P41182 P41182|P41182-2 B-cell lymphoma 6 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4482.4482.2 9.94 3.16 2.335 3 1 1 0 522.7405 964.5083 S457s TMT10 453 (R) SMTGsPR (S) S(0.0)MT(0.0)GS(0.99)PR s:Phosphorylated S BCL6 80670.9 4 12 557.1 273.04 HUMAN 1 31.7717 24.5522 VNSHLPGSPKQNRST-p Q8NDX1;S143-p VNSHLPGSPKQNRST 0.322888488875434 0.136916972683253 0.144 0.160333333333333 9.19341745657508 11.3795149753435 0.144 0.160333333333333 0.120408807243702 0.0727861088291595 1.84184965388088 2.2216940355135 Q8NDX1 PSD4 Q8NDX1.S143.p_PSD4 Q8NDX1_S143s _1_1_143_143 Q8NDX1 Q8NDX1|Q8NDX1-2 PH and SEC7 domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10656.10656.3 20.32 20.32 5.171 5 1 1 0 805.0795 2333.2614 S143s TMT10 127 (R) QNTASPGSPVNSHLPGsPK (Q) QNT(0.0)AS(0.0)PGS(0.0)PVNS(0.0)HLPGS(0.99)PK K:TMT10,s:Phosphorylated S PSD4 117388.3 2 3 3127.1 60.04 HUMAN 1 9.1934 11.3795 VNSIKFDSE______-p Q14978-3;S699-p VNSIKFDSE______ 0.605173265345025 0.661698762454924 0.072 0.0466666666666667 4.03047826819446 2.45580723207653 0.072 0.0466666666666667 0.395323082589315 0.568092789172016 0.922951084203135 0.607457666020363 Q14978 NOLC1 Q14978.3.S699.p_NOLC1 Q14978-3_S699s _1_1_699_699 Q14978-3 Q14978-2|Q14978-3 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.38149.38648.2 21.93 21.93 8.216 4 1 1 0 1103.0641 2125.1541 S699s TMT10 685 (R) GGSISVQVNSIKFDsE (-) GGS(0.0)IS(0.0)VQVNS(0.0)IKFDS(0.99)E K:TMT10,s:Phosphorylated S NOLC1 73744 160 23 72.1 655.55 HUMAN 1 4.0305 2.4558 VNSNGKESPGSSEFF-p Q8N108-12;S541-p VNSNGKESPGSSEFF 0.039271926938295 0.00379685727719789 0.527666666666667 0.631 31.7670589391369 35.8822830348792 0.527666666666667 0.631 0.000665723834620656 0.000258090308364133 6.98829908554505 8.42475291895661 Q8N108 MIER1 Q8N108.12.S541.p_MIER1 Q8N108-12_S541s_1_1_541_541 Q8N108-12 Q8N108-12|Q8N108-13|Q8N108-17 Isoform 2 of Mesoderm induction early response protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.24096.24096.5 13.99 13.99 0 6 1 1 0 857.4056 4202.0405 N537n S541s TMT10 534 (R) VNSnGKEsPGSSEFFQEAVSHGKFEELENTDD (-) VN(0.50)S(0.0)N(0.50)GKES(0.99)PGS(0.0)S(0.0)EFFQEAVS(0.0)HGKFEELEN(0.0)T(0.0)DD K:TMT10,n:Deamidated,s:Phosphorylated S MIER1 63824.4 6 5 1736.1 118.57 HUMAN 1 31.7671 35.8823 VNSTSEESHDEDEIR-p Q8NBU5;S322-p VNSTSEESHDEDEIR 0.121466387510931 0.00264930192085164 0.321 0.714666666666667 19.0363684658356 39.2044367918385 0.321 0.714666666666667 0.0124842700213049 0.000120103681753983 3.67512846876227 9.779220808238 Q8NBU5 ATAD1 Q8NBU5.S322.p_ATAD1 Q8NBU5_S322s _1_1_322_322 Q8NBU5 Q8NBU5 ATPase family AAA domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9898.10103.4 22.19 22.19 1.179 5 1 1 0 863.1423 3369.5781 S322s TMT10 313 (R) EYVNSTSEEsHDEDEIRPVQQQDLHR (A) EY(0.0)VNS(0.0)T(0.0)S(0.0)EES(0.99)HDEDEIRPVQQQDLHR s:Phosphorylated S ATAD1 41085.6 4 2 5170.1 22.19 HUMAN 1 19.0364 39.2044 VNTDLFGSANLGSKT-p Q9NY74;S553-p VNTDLFGSANLGSKT 0.799321908925685 0.129638194650754 0.0516666666666667 -0.164333333333333 1.87364195755271 11.6942821299861 0.0516666666666667 -0.164333333333333 0.649584725503219 0.0676973684496922 0.480633680003363 -2.27712091373837 Q9NY74 ETAA1 Q9NY74.S553.p_ETAA1 Q9NY74_S553s _1_1_553_553 Q9NY74 Q9NY74 Ewing's tumor-associated antigen 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25219.25219.3 17.34 17.34 5.714 3 1 1 0 710.3737 2049.1381 S553s TMT10 544 (K) APVNTDLFGsANLGSK (T) APVNT(0.0)DLFGS(0.99)ANLGS(0.0)K K:TMT10,s:Phosphorylated S ETAA1 104522.7 1 5 2527.1 79.86 HUMAN 1 1.8736 -11.6943 VNTGAVGSYIYDRDP-p P52943;S195-p VNTGAVGSYIYDRDP 0.538843223913052 0.154395245209893 0.099 0.201666666666667 4.96183632943497 10.6698071087368 0.099 0.201666666666667 0.319018866088337 0.0857075911287108 1.09705973525476 2.09744484752289 P52943 CRIP2 P52943.S195.p_CRIP2 P52943_S195s _1_1_195_195 P52943 P52943-2 Cysteine-rich protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17475.17475.4 17.97 17.97 3.999 4 1 1 0 634.8178 2456.2822 S195s TMT10 187 (K) GVNTGAVGsYIYDRDPEGK (V) GVNT(0.0)GAVGS(0.99)Y(0.0)IY(0.0)DRDPEGK K:TMT10,s:Phosphorylated S CRIP2 23291.1 2 7 1870.1 109.93 HUMAN 1 4.9618 10.6698 VNTHHLHSSSDDEDD-p Q9UPN7;S529-p VNTHHLHSSSDDEDD 0.732651492896551 0.0652241331926333 0.0646666666666667 0.290666666666667 2.55773366401058 15.7754553778286 0.0646666666666667 0.290666666666667 0.554915216116138 0.0264517532132927 0.629056826632145 3.02309406122307 Q9UPN7 PPP6R1 Q9UPN7.S529.p_PPP6R1 Q9UPN7_S529sS530sS531s_3_3_529_531 Q9UPN7 Q9UPN7 Serine/threonine-protein phosphatase 6 regulatory subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16579.16579.4 13.27 13.27 13.267 4 3 3 0 844.6204 3135.5529 S529s S530s S531s TMT10 517 (K) NMVDLVNTHHLHsssDDEDDRLK (E) NMVDLVNT(0.0)HHLHS(0.99)S(0.99)S(0.99)DDEDDRLK K:TMT10,s:Phosphorylated S PPP6R1 97349.5 4 8 1319.1 154.5 HUMAN 1 2.5577 15.7755 VNVIPPHTPVRTVMN-p P06400;T373-p VNVIPPHTPVRTVMN 0.651183474642633 0.00919514367416896 0.120333333333333 -0.784 3.49220182747015 28.7819773166329 0.120333333333333 -0.784 0.44748637575723 0.0013237387077081 0.818727529626489 -6.06083176532192 P06400 RB1 P06400.T373.p_RB1 P06400_T373t _1_1_373_373 P06400 P06400 Retinoblastoma-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14495.14702.3 23.26 11.27 21.546 2 1 1 0 861.4632 2502.408 T373t TMT10 359 (R) KSNLDEEVNVIPPHtPVR (T) KS(0.0)NLDEEVNVIPPHT(0.99)PVR K:TMT10,t:Phosphorylated T RB1 107013.3 10 4 155.1 502.88 HUMAN 1 3.4922 -28.782 VNVLNICSDDELGSE-p Q08209;S373-p VNVLNICSDDELGSE 0.935578359045866 0.165186551394751 0.0133333333333333 0.203 0.566787720134501 10.283926263219 0.0133333333333333 0.203 0.877649738945156 0.0936714781848963 0.161378284192118 2.03023678593016 Q08209 PPP3CA Q08209.S373.p_PPP3CA Q08209_S373s _1_1_373_373 Q08209 Q08209|Q08209-2|Q08209-3|Q08209-5|E7ETC2|Q08209-4 Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.36900.36900.4 23.26 23.26 1.145 4 1 1 0 927.673 3627.6992 S373s TMT10 361 (K) VTEMLVNVLNICsDDELGSEEDGFDGATAAAR (K) VT(0.0)EMLVNVLNICS(0.99)DDELGS(0.0)EEDGFDGAT(0.0)AAAR C:Carbamidomethylation,s:Phosphorylated S PPP3CA 59371.4 3 3 3004.1 63.48 HUMAN 1 0.5668 10.2839 VNYAAGLSPYADKGK-p Q8N6T7;S10-p VNYAAGLSPYADKGK 0.610444527145548 0.10016820010431 0.0756666666666667 -0.299333333333333 3.97037808254308 13.2041441211754 0.0756666666666667 -0.299333333333333 0.400831821003617 0.0478173592151228 0.911463115312441 -2.54649502470796 Q8N6T7 SIRT6 Q8N6T7.S10.p_SIRT6 Q8N6T7_S10s _1_1_10_10 Q8N6T7 Q8N6T7|Q8N6T7-2|M0QXA0 NAD-dependent protein deacetylase sirtuin-6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22961.22961.2 13.81 13.81 3.675 4 1 1 0 903.9322 1726.8849 S10s Acetyl 2 (M) SVNYAAGLsPYADK (G) S(0.0)VNY(0.0)AAGLS(0.99)PY(0.0)ADK K:TMT10,s:Phosphorylated S SIRT6 39460.5 1 1 1763.1 116.79 HUMAN 1 3.9704 -13.2041 VNYHRAQSLSHGLRL-p Q13882;S159-p VNYHRAQSLSHGLRL 0.772883727112607 0.133995285442512 0.0416666666666667 0.171 2.13899293943724 11.5056117737585 0.0416666666666667 0.171 0.611083709173878 0.0707031596872784 0.539367648945465 2.24387230757009 Q13882 PTK6 Q13882.S159.p_PTK6 Q13882_S159s _1_1_159_159 Q13882 Q13882 Protein-tyrosine kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7162.7162.3 10.97 10.97 3.333 2 1 1 0 426.5564 1197.6901 S159s TMT10 157 (R) AQsLSHGLR (L) AQS(0.99)LS(0.0)HGLR s:Phosphorylated S PTK6 52403.8 1 2 3292.1 54.8 HUMAN 1 2.139 11.5056 VPAAPVPSPVAPAPV-p Q9UK76;S131-p VPAAPVPSPVAPAPV 0.137325721125408 0.84560245377103 -0.260333333333333 -0.022 17.6613733170454 1.02391809193541 -0.260333333333333 -0.022 0.0171341540915032 0.789965619969707 -3.3940551215502 -0.279839662308754 Q9UK76 HN1 Q9UK76.S131.p_HN1 Q9UK76_S131s _1_1_131_131 Q9UK76 Q9UK76|Q9UK76-3 Jupiter microtubule associated homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21991.21991.4 33.37 26.46 7.051 5 1 1 0 1188.6027 4671.4306 S131s TMT10 100 (K) GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPsPVAPAPVPSR (R) GEGDIHENVDT(0.0)DLPGS(0.0)LGQS(0.0)EEKPVPAAPVPS(0.99)PVAPAPVPS(0.0)R K:TMT10,s:Phosphorylated S JPT1 16014.2 8 10 705.1 239.23 HUMAN 1 -17.6614 -1.0239 VPACVLITPGDSKAV-p Q96HE9;T165-p VPACVLITPGDSKAV 0.424867776043857 0.0378256948773241 -0.113666666666667 -0.528 6.85130463469214 19.1001980008065 -0.113666666666667 -0.528 0.206475980210395 0.0123021268245157 -1.43495894306391 -3.68519662317389 Q96HE9 PRR11 Q96HE9.T165.p_PRR11 Q96HE9_T165t _1_1_165_165 Q96HE9 Q96HE9 Proline-rich protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25941.25941.3 13.93 13.93 6.862 3 1 1 0 741.7341 2143.2197 T165t TMT10 155 (K) LTNVPACVLItPGDSK (A) LT(0.0)NVPACVLIT(0.99)PGDS(0.0)K C:Carbamidomethylation,K:TMT10,t:Phosphorylated T PRR11 40597.8 1 2 1094.1 178.6 HUMAN 1 -6.8513 -19.1002 VPADKARSPAVPLLL-p Q92837;S88-p VPADKARSPAVPLLL 0.0635370415880919 0.0537770533272325 0.409 0.257333333333333 25.9040119577423 16.9223393092549 0.409 0.257333333333333 0.00256802237993691 0.0203126258502298 5.27643955517151 3.24489600111583 Q92837 FRAT1 Q92837.S88.p_FRAT1 Q92837_S88s _1_1_88_88 Q92837 Q92837 Proto-oncogene FRAT1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.34279.34279.4 24.79 24.79 13.599 2 1 1 0 742.9309 2888.7287 S88s TMT10 86 (K) ARsPAVPLLLPPALAETVGPAPPGVLR (C) ARS(0.99)PAVPLLLPPALAET(0.0)VGPAPPGVLR s:Phosphorylated S FRAT1 29434.8 2 1 3094.1 60.86 HUMAN 1 25.904 16.9223 VPAEGVRTAERAARG-p Q13724;T18-p VPAEGVRTAERAARG 0.778996094549543 0.227135481381164 0.044 -0.219666666666667 2.08460551050276 8.47925379173418 0.044 -0.219666666666667 0.618784532023451 0.141930136624003 0.527458070214088 -1.71763497132412 Q13724 MOGS Q13724.T18.p_MOGS Q13724_T18t _1_1_18_18 Q13724 Q13724|B8ZZE2 Mannosyl-oligosaccharide glucosidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.6486.6486.3 11.37 6.36 99 1 1 1 0 522.2743 1484.8383 T18t TMT10 10 (R) AVPAEGVRtAER (A) AVPAEGVRT(1.0)AER t:Phosphorylated T MOGS 92087 1 1 5621.1 17.65 HUMAN 1 2.0846 -8.4793 VPAFGVASPPPLTDT-p Q08211;S87-p VPAFGVASPPPLTDT 0.147946322560902 0.15033662432681 -0.287333333333333 0.177 16.8335321001065 10.8270233806731 -0.287333333333333 0.177 0.0207322668441285 0.0826604303385829 -3.22991902231225 2.12489143399513 Q08211 DHX9 Q08211.S87.p_DHX9 Q08211_S87s _1_1_87_87 Q08211 Q08211 ATP-dependent RNA helicase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.32063.32063.5 33.18 33.18 1.139 8 1 1 0 1155.604 5694.0231 S87s TMT10 72 (R) INEIKSEEVPAFGVAsPPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK (A) INEIKS(0.0)EEVPAFGVAS(0.99)PPPLT(0.0)DT(0.0)PDT(0.0)T(0.0)ANAEGDLPT(0.0)T(0.0)MGGPLPPHLALK K:TMT10,s:Phosphorylated S DHX9 142268.2 49 1 1186.1 168.77 HUMAN 1 -16.8335 10.827 VPAGGSRSEAEDEDD-p Q9UJV9;S23-p VPAGGSRSEAEDEDD 0.616312626410794 0.165843762993295 0.067 0.218666666666667 3.9002440082283 10.259993625311 0.067 0.218666666666667 0.407357389798044 0.0941890979054266 0.898012512073859 2.02607519153527 Q9UJV9 DDX41 Q9UJV9.S23.p_DDX41 Q9UJV9_S23s _1_1_23_23 Q9UJV9 Q9UJV9 Probable ATP-dependent RNA helicase DDX41 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21690.21690.3 21.27 21.27 1.192 5 1 1 0 1140.5072 3339.5338 S23s TMT10 13 (R) TDEVPAGGSRsEAEDEDDEDYVPYVPLR (Q) T(0.0)DEVPAGGS(0.0)RS(0.99)EAEDEDDEDY(0.0)VPY(0.0)VPLR s:Phosphorylated S DDX41 70521.1 3 3 1480.1 138.65 HUMAN 1 3.9002 10.26 VPAHKLDSPTMSRAR-p P19634;S693-p VPAHKLDSPTMSRAR 0.657436738828093 0.965986453315642 0.0673333333333333 0.00466666666666667 3.41756525091786 0.214447215810087 0.0673333333333333 0.00466666666666666 0.455243207841141 0.951820991285102 0.804020171423103 0.0632667900341531 P19634 SLC9A1 P19634.S693.p_SLC9A1 P19634_S693s_1_1_693_693 P19634 P19634 Sodium/hydrogen exchanger 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20333.20333.3 17.58 11.39 1.497 5 1 1 0 899.4694 2615.438 N681n S693s TMT10 680 (K) InNYLTVPAHKLDsPTMSR (A) IN(0.99)N(0.0)Y(0.0)LT(0.0)VPAHKLDS(0.99)PT(0.0)MS(0.0)R K:TMT10,n:Deamidated,s:Phosphorylated S SLC9A1 91274.8 21 5 732.1 235.73 HUMAN 1 3.4176 0.2144 VPAKKSASLDVEPIY-p Q13033-2;S436-p VPAKKSASLDVEPIY 0.244951288887532 0.673469121735823 0.263 -0.0466666666666667 11.6810555799481 2.34835169331744 0.263 -0.0466666666666667 0.0679038567979668 0.582324189200766 2.27588715285628 -0.584563606731881 Q13033 STRN3 Q13033.2.S436.p_STRN3 Q13033-2_S436s _1_1_436_436 Q13033-2 Q13033|Q13033-2 Isoform Alpha of Striatin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25503.25503.2 7.83 7.83 2.542 4 1 1 0 903.9518 1726.9213 S436s TMT10 434 (K) SAsLDVEPIYTFR (A) S(0.0)AS(0.99)LDVEPIY(0.0)T(0.0)FR s:Phosphorylated S STRN3 78142.7 1 9 1014.1 188.21 HUMAN 1 11.6811 -2.3484 VPAPVGDSHVDGAAK-p Q13177;S209-p VPAPVGDSHVDGAAK 0.378389324662461 0.056330355064178 -0.194 -0.558333333333333 7.79678571305416 16.6462608893989 -0.194 -0.558333333333333 0.166081565043963 0.0216458134405797 -1.59988741252518 -3.19091542788721 Q13177 PAK2 Q13177.S209.p_PAK2 Q13177_S209s _1_1_209_209 Q13177 Q13177 Serine/threonine-protein kinase PAK 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18683.18683.4 18.32 18.32 10.72 2 1 1 0 618.0753 2389.3127 S209s TMT10 197 (R) SVIDPVPAPVGDsHVDGAAK (S) S(0.0)VIDPVPAPVGDS(0.99)HVDGAAK K:TMT10,s:Phosphorylated S PAK2 58326.8 3 28 272.1 393.22 HUMAN 1 -7.7968 -16.6463 VPAQANGTPTTKSPA-p Q9BQG0-2;T1227-p VPAQANGTPTTKSPA 0.518846820664332 0.0205344648135939 -0.0923333333333333 -0.623333333333333 5.26418651869298 23.096970598012 -0.0923333333333334 -0.623333333333333 0.297564657799888 0.00490120581605444 -1.15225876115707 -4.57223986998972 Q9BQG0 MYBBP1A Q9BQG0.2.T1227.p_MYBBP1A Q9BQG0-2_T1227t_1_1_1227_1227 Q9BQG0-2 Q9BQG0-2 Isoform 2 of Myb-binding protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9365.9365.3 17.37 17.37 4.277 3 1 1 0 718.071 2071.2479 N1225n T1227t TMT10 1218 (K) AKVPAQAnGtPTTK (S) AKVPAQAN(1.0)GT(0.99)PT(0.0)T(0.0)K K:TMT10,n:Deamidated,t:Phosphorylated T MYBBP1A 150334.3 4 6 297.1 378.74 HUMAN 1 -5.2642 -23.097 VPAQQSPSM______-p O60341;S851-p VPAQQSPSM______ 0.224767265517543 0.194614737251053 0.347333333333333 0.154666666666667 12.4492518127739 9.34697317850274 0.347333333333333 0.154666666666667 0.0568950939263791 0.116225836923191 2.41228231207243 1.8677435841329 O60341 KDM1A O60341.S851.p_KDM1A O60341_S851s _1_1_851_851 O60341 O60341-2 Lysine-specific histone demethylase 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13140.13140.2 16.92 16.92 3.301 3 1 1 0 854.4041 1627.8311 S851s TMT10 839 (R) QATPGVPAQQSPsM (-) QAT(0.0)PGVPAQQS(0.0)PS(0.99)M s:Phosphorylated S KDM1A 93414.4 1 11 232.1 420.78 HUMAN 1 12.4493 9.347 VPAQRGASPEAASGG-p P17861-2;S47-p VPAQRGASPEAASGG 0.50556949003824 0.625942291196403 -0.103666666666667 0.0536666666666667 5.46929410954845 2.7689795131014 -0.103666666666667 0.0536666666666667 0.283838033357873 0.528569438206593 -1.18940598003042 0.672995335767651 P17861 XBP1 P17861.2.S47.p_XBP1 P17861-2_S47s _1_1_47_47 P17861-2 P17861-2|B1AHH2 Isoform 2 of X-box-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9651.9651.2 16.86 11.14 3.316 2 1 1 0 839.4114 1597.8496 S47s TMT10 45 (R) GAsPEAASGGLPQAR (K) GAS(0.99)PEAAS(0.0)GGLPQAR s:Phosphorylated S XBP1 40375.7 2 1 4665.1 28.22 HUMAN 1 -5.4693 2.769 VPATPQGSPMKDRLN-p Q5QJ74;S41-p VPATPQGSPMKDRLN 0.84761259025746 0.00950838597601873 -0.033 -0.429 1.39126043661142 28.5289016332469 -0.033 -0.429 0.7258952529997 0.00140316853264649 -0.369333838914962 -5.98784494150025 Q5QJ74 TBCEL Q5QJ74.S41.p_TBCEL Q5QJ74_S41s _1_1_41_41 Q5QJ74 Q5QJ74|G3V147|B3KNB6 Tubulin-specific chaperone cofactor E-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12739.12739.4 19.58 13.55 1.903 2 1 1 0 611.3209 2362.2888 S41s TMT10 26 (R) RGPGMGVHVPATPQGsPMK (D) RGPGMGVHVPAT(0.0)PQGS(0.99)PMK K:TMT10,s:Phosphorylated S TBCEL 48707.6 16 1 2256.1 91.09 HUMAN 1 -1.3913 -28.5289 VPAVKRFSVSFAKHP-p Q6PFW1;S1073-p VPAVKRFSVSFAKHP 0.132087959934017 0.00413791477536262 0.567 0.995 18.1467312213464 35.0979189811206 0.567 0.995 0.0153224029004026 0.000309177657133112 3.49202192473931 8.13033097330062 Q6PFW1 PPIP5K1 Q6PFW1.S1073.p_PPIP5K1 Q6PFW1_S1073s _1_1_1073_1073 Q6PFW1 Q6PFW1|Q6PFW1-2|B7WPL9|F8W9A8|Q6PFW1-5 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.17652.17652.3 7.73 7.73 2.162 2 1 1 0 493.9423 1399.8462 S1073s TMT10 1071 (K) RFsVSFAK (H) RFS(0.99)VS(0.0)FAK K:TMT10,s:Phosphorylated S PPIP5K1 161343.9 1 7 1248.1 162.13 HUMAN 1 18.1467 35.0979 VPAVQRDSPVIVRNP-p I3L2J0;S809-p VPAVQRDSPVIVRNP 0.41481183377626 0.00611959233892658 0.142 0.763333333333333 7.04968964511725 31.9022844770592 0.142 0.763333333333333 0.19725636941343 0.000645314691124653 1.46970834967234 7.02036933472901 I3L2J0 NotFound I3L2J0.S809.p_NotFound I3L2J0_S809s _1_1_809_809 I3L2J0 I3L2J0 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16038.16038.5 17.62 12.4 11.866 2 1 1 0 616.3542 2997.7726 S809s TMT10 801 (R) RVPAVQRDsPVIVRNPDVPLPSK (F) RVPAVQRDS(0.99)PVIVRNPDVPLPS(0.0)K K:TMT10,s:Phosphorylated S CIC 259056.7 5 18 23.1 999.57 HUMAN 1 7.0497 31.9023 VPAYFNDSQRQATKD-p P38646;S200-p VPAYFNDSQRQATKD 0.321295358159683 0.217918087780824 0.176333333333333 0.121666666666667 9.2314832967 8.70715964423124 0.176333333333333 0.121666666666667 0.119358037738469 0.134674085627585 1.84844139127695 1.75706206471789 P38646 HSPA9 P38646.S200.p_HSPA9 P38646_S200s _1_1_200_200 P38646 P38646 Stress-70 protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20955.20955.4 18.71 18.71 2.167 4 1 1 0 666.1016 2581.4139 S200s TMT10 188 (K) NAVITVPAYFNDsQRQATK (D) NAVIT(0.0)VPAY(0.0)FNDS(0.99)QRQAT(0.0)K K:TMT10,s:Phosphorylated S HSPA9 73964.5 3 27 367.2 341.38 HUMAN 1 9.2315 8.7072 VPDCFQRTPKKLCIP-p O95071;T734-p VPDCFQRTPKKLCIP 0.921583751108816 0.0340474106016949 0.02 -0.304 0.695688194272708 19.7836408079549 0.02 -0.304 0.851983493173144 0.0105108035532046 0.195700693004644 -3.8291367414979 O95071 UBR5 O95071.T734.p_UBR5 O95071_T734t _1_1_734_734 O95071 O95071|O95071-2|E7EMW7 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.12314.12314.3 12.04 5.72 99 1 1 1 0 595.9762 1705.946 T734t TMT10 727 (K) VPDCFQRtPK (K) VPDCFQRT(1.0)PK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T UBR5 312542 1 11 80.1 636.57 HUMAN 1 0.6957 -19.7836 VPDKSKPSPQKDQAL-p Q9H9J4;S75-p VPDKSKPSPQKDQAL 0.254904931587033 0.000952253650599092 -0.212333333333333 -1.47333333333333 11.2950183027736 53.6286233622811 -0.212333333333333 -1.47333333333333 0.0742161069991425 4.33648315552217e-06 -2.20787698569761 -18.3526760865652 Q9H9J4 USP42 Q9H9J4.S75.p_USP42 Q9H9J4_S75s _1_1_75_75 Q9H9J4 Q9H9J4|Q9H9J4-2|E5RJP3|B4DP25 Ubiquitin carboxyl-terminal hydrolase 42 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14216.14216.5 19.15 15.81 1.467 2 1 1 0 612.5461 2978.7445 S75s TMT10 72 (K) SKPsPQKDQALGDGIAPPQK (V) S(0.0)KPS(0.99)PQKDQALGDGIAPPQK K:TMT10,s:Phosphorylated S USP42 146872.9 2 1 255.1 399.37 HUMAN 1 -11.295 -53.6286 VPDRMLASPAPEDEE-p Q8TBP0;S155-p VPDRMLASPAPEDEE 0.106562833231388 0.0205017219056887 -0.367333333333333 -0.444333333333333 20.4693473131041 23.10790737186 -0.367333333333333 -0.444333333333333 0.00897563676258465 0.00488887870987542 -3.98040923320046 -4.57482818721423 Q8TBP0 TBC1D16 Q8TBP0.S155.p_TBC1D16 Q8TBP0_S155s _1_1_155_155 Q8TBP0 Q8TBP0 TBC1 domain family member 16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.15396.15396.2 15.76 15.76 99 1 1 1 0 927.9512 1774.9297 S155s TMT10 152 (R) MLAsPAPEDEEK (L) MLAS(1.0)PAPEDEEK K:TMT10,s:Phosphorylated S TBC1D16 87454.2 2 3 2748.1 71.91 HUMAN 1 -20.4693 -23.1079 VPDVELKSAKMDIDV-p Q09666;S856-p VPDVELKSAKMDIDV 0.397840397989355 0.14937118430965 -0.199333333333333 0.283666666666667 7.38781227228976 10.8680040720626 -0.199333333333333 0.283666666666667 0.182481470832085 0.0818841024132649 -1.52874136319955 2.13205251898413 Q09666 AHNAK Q09666.S856.p_AHNAK Q09666_S856s _1_1_856_856 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25502.25502.4 25.28 25.28 99 1 1 1 0 787.4099 3066.6537 S856s TMT10 856 (K) sAKMDIDVPDVEVQGPDWHLK (M) S(1.0)AKMDIDVPDVEVQGPDWHLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 39 1.1 4313.36 HUMAN 1 -7.3878 10.868 VPEADLCSPSDLLQG-p O75427;S623-p VPEADLCSPSDLLQG 0.971185861810661 0.664780300015656 -0.00733333333333334 0.0493333333333333 0.249019789508019 2.42696069277119 -0.00733333333333333 0.0493333333333334 0.944273976578976 0.571878712456766 -0.0732035010121799 0.601333179478031 O75427 LRCH4 O75427.S623.p_LRCH4 O75427_S623s _1_1_623_623 O75427 O75427|C9JYK0|A0A087X197 Leucine-rich repeat and calponin homology domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26420.26420.3 19.73 19.73 2.939 3 1 1 0 809.3812 2346.1631 S623s TMT10 614 (K) MGVPEADLCsPSDLLQGTAR (G) MGVPEADLCS(0.99)PS(0.0)DLLQGT(0.0)AR C:Carbamidomethylation,s:Phosphorylated S LRCH4 74133.6 1 9 1458.1 140.35 HUMAN 1 -0.249 2.427 VPEAPSPSPVPSPAP-p O43281;S319-p VPEAPSPSPVPSPAP 0.819005934462948 0.0436552499165268 0.0403333333333333 -0.241666666666667 1.67072918935813 18.2162112623796 0.0403333333333333 -0.241666666666667 0.680655065714989 0.01507921987212 0.434581601736499 -3.50324362763846 O43281 EFS O43281.S319.p_EFS O43281_S319s _1_1_319_319 O43281 O43281|O43281-2|O43281-3 Embryonal Fyn-associated substrate HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22901.22901.4 21.93 21.93 2.629 3 1 1 0 674.6204 2615.4871 S319s TMT10 305 (R) RPLPALPVPEAPSPsPVPSPAPGR (K) RPLPALPVPEAPS(0.0)PS(0.99)PVPS(0.0)PAPGR s:Phosphorylated S EFS 59270.7 4 3 2954.1 64.79 HUMAN 1 1.6707 -18.2162 VPEDDNISNDSNDFT-p F8VX04;S25-p VPEDDNISNDSNDFT 0.676544499697039 0.136575128871702 -0.056 -0.159 3.17827728311132 11.3920719146364 -0.056 -0.159 0.481030120935557 0.0725759632345399 -0.756395551842104 -2.22390108156269 F8VX04 SLC38A1 F8VX04.S25.p_SLC38A1 F8VX04_S25sS28s_2_2_25_28 F8VX04 F8VX04|Q9H2H9 Sodium-coupled neutral amino acid transporter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31896.31896.3 20.85 20.85 1.152 7 2 2 0 1572.3754 4555.167 S25s S28s TMT10 6 (K) SGLELTELQNMTVPEDDNIsNDsNDFTEVENGQINSK (F) S(0.0)GLELT(0.0)ELQNMT(0.0)VPEDDNIS(0.99)NDS(0.99)NDFT(0.0)EVENGQINS(0.0)K K:TMT10,s:Phosphorylated S SLC38A1 56936.1 37 4 2270.1 90.47 HUMAN 1 -3.1783 -11.3921 VPEFTPKSGVKIHVS-p P22314;S803-p VPEFTPKSGVKIHVS 0.127580448450417 0.0221420189415373 0.464333333333333 -0.454666666666667 18.5422517139578 22.6035981958346 0.464333333333333 -0.454666666666667 0.0139886185780147 0.00549085759446284 3.57285005160522 -4.4564584798619 P22314 UBA1 P22314.S803.p_UBA1 P22314_S803s _1_1_803_803 P22314 P22314|P22314-2|Q5JRR6 Ubiquitin-like modifier-activating enzyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.32250.32250.4 17.6 17.6 1.194 4 1 1 0 768.6825 2991.7486 S803s TMT10 785 (R) AAVATFLQSVQVPEFTPKsGVK (I) AAVAT(0.0)FLQS(0.0)VQVPEFT(0.0)PKS(0.99)GVK K:TMT10,s:Phosphorylated S UBA1 118930.9 5 7 289.1 381.86 HUMAN 1 18.5423 -22.6036 VPEKADFSPFGNSQG-p Q9H2M9;S450-p VPEKADFSPFGNSQG 0.0767901617046939 0.702440288677142 -0.371666666666667 -0.042 23.9030082199414 2.10791666111677 -0.371666666666667 -0.042 0.00407098196130127 0.61547204785087 -4.77120093920248 -0.532507435590559 Q9H2M9 RAB3GAP2 Q9H2M9.S450.p_RAB3GAP2 Q9H2M9_S450s _1_1_450_450 Q9H2M9 Q9H2M9 Rab3 GTPase-activating protein non-catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17377.17377.3 13.05 11.56 12.36 3 1 1 0 592.6033 1695.8288 S450s TMT10 447 (K) ADFsPFGNSQGPSR (V) ADFS(0.99)PFGNS(0.0)QGPS(0.0)R s:Phosphorylated S RAB3GAP2 157579.4 4 1 1674.1 121.94 HUMAN 1 -23.903 -2.1079 VPELCNQSESSGEDF-p A0AV02-2;S592-p VPELCNQSESSGEDF 0.945369130311494 0.404007121500363 0.0103333333333333 0.0943333333333333 0.479268522997339 5.23755918156746 0.0103333333333333 0.0943333333333334 0.89551558346708 0.299394681949185 0.137621475924205 1.14717796376848 A0AV02 SLC12A8 A0AV02.2.S592.p_SLC12A8 A0AV02-2_S592s _1_1_592_592 A0AV02-2 A0AV02-2|A0AV02-3|A0AV02-5 Isoform 2 of Solute carrier family 12 member 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30780.30995.4 22.13 18.38 1.158 7 1 1 0 1025.9736 4020.9061 S592s TMT10 571 (K) SEGTQPEGTYGEQLVPELCNQsESSGEDFFLK (S) S(0.0)EGT(0.0)QPEGT(0.0)Y(0.0)GEQLVPELCNQS(0.99)ES(0.0)S(0.0)GEDFFLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SLC12A8 82733.5 2 3 3701.1 44.92 HUMAN 1 0.4793 5.2376 VPELSLDTGTLEKKS-p Q04656-3;T231-p VPELSLDTGTLEKKS 0.767860162181217 0.733519223223441 -0.0423333333333333 -0.0393333333333333 2.19818462214572 1.85618451114526 -0.0423333333333333 -0.0393333333333334 0.602811512366036 0.652201132941496 -0.552257485551176 -0.47665823927977 Q04656 ATP7A Q04656.3.T231.p_ATP7A Q04656-3_T231t _1_1_231_231 Q04656-3 Q04656-3|Q04656-2|Q04656-5 Isoform 2 of Copper-transporting ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.28999.28999.3 10.58 10.58 1.134 3 1 1 0 728.0609 2102.1997 T231t TMT10 222 (K) ELVPELSLDtGTLEK (K) ELVPELS(0.0)LDT(0.99)GT(0.0)LEK K:TMT10,t:Phosphorylated T ATP7A 173615 3 1 1241.1 162.93 HUMAN 1 -2.1982 -1.8562 VPEMLEESQELLEPV-p Q5VZ89-7;S1184-p VPEMLEESQELLEPV 0.283907100703039 0.234041031302634 -0.151 0.118333333333333 10.3164771028425 8.30486742918546 -0.151 0.118333333333333 0.0929720248707565 0.147745158093539 -2.0367509957344 1.68745339957397 Q5VZ89 DENND4C Q5VZ89.7.S1184.p_DENND4C Q5VZ89-7_S1184s _1_1_1184_1184 Q5VZ89-7 Q5VZ89-7|Q5VZ89-3|Q5VZ89-5 Isoform 2 of DENN domain-containing protein 4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.32631.32631.3 19.52 16.26 8.582 3 1 1 0 1068.8748 3124.6376 S1184s TMT10 1174 (R) SSPVPEMLEEsQELLEPVVDDVPK (T) S(0.0)S(0.0)PVPEMLEES(0.99)QELLEPVVDDVPK K:TMT10,s:Phosphorylated S DENND4C 220154.2 4 12 116.1 565.52 HUMAN 1 -10.3165 8.3049 VPEMPGETPPLSPID-p P05412;T239-p VPEMPGETPPLSPID 0.216857016052038 0.0332236511255855 0.304 0.392 12.789478829694 19.935922798068 0.304 0.392 0.0526080394300674 0.0101486370328269 2.47320043707034 3.86161348656855 P05412 JUN P05412.T239.p_JUN P05412_T239tS243s_2_2_239_243 P05412 P05412 Transcription factor AP-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.25129.25129.4 16.16 16.16 5.079 4 2 2 0 1028.4938 3935.0182 M235m T239t S243s TMT10 222 (R) LQALKEEPQTVPEmPGEtPPLsPIDMESQER (I) LQALKEEPQT(0.0)VPEM(0.99)PGET(0.99)PPLS(0.99)PIDM(0.0)ES(0.0)QER K:TMT10,m:Oxidized methionine,t:Phosphorylated T,s:Phosphorylated S JUN 35846.1 1 3 1749.2 117.66 HUMAN 1 12.7895 19.9359 VPEPEPDSDSNQERK-p Q5VTR2;S136-p VPEPEPDSDSNQERK 0.137325721125408 0.235357675893401 0.291 0.122333333333333 17.666893297908 8.27392378847015 0.291 0.122333333333333 0.0171123900292615 0.148801606898854 3.39516191768414 1.68209619352683 Q5VTR2 RNF20 Q5VTR2.S136.p_RNF20 Q5VTR2_S136s _1_1_136_136 Q5VTR2 Q5VTR2 E3 ubiquitin-protein ligase BRE1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17610.17870.2 15.27 15.27 1.128 2 1 1 0 1096.0085 2111.0454 S136s TMT10 126 (K) ALVVPEPEPDsDSNQER (K) ALVVPEPEPDS(0.99)DS(0.0)NQER s:Phosphorylated S RNF20 114288 9 3 2164.1 94.75 HUMAN 1 17.6669 8.2739 VPEPRARSPPQPLGE-p A0A044PY82;S233-p VPEPRARSPPQPLGE 0.92749907946406 0.599168425955721 0.0136666666666667 -0.0553333333333333 0.647044142261984 3.01419108457317 0.0136666666666667 -0.0553333333333333 0.86157995380974 0.499552217969825 0.182838500122636 -0.723191417964502 A0A044PY82 NotFound A0A044PY82.S233.p_NotFound A0A044PY82_S233s _1_1_233_233 A0A044PY82 A0A044PY82|Q96FF7 Uncharacterized protein MISP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15349.15560.3 13.62 13.62 99 1 1 1 0 611.0127 1751.058 S233s TMT10 231 (R) ARsPPQPLGELK (R) ARS(1.0)PPQPLGELK K:TMT10,s:Phosphorylated S MISP3 39175.2 11 2 3347.1 53.23 HUMAN 1 0.647 -3.0142 VPESSPHSPCEGLPS-p A7E2V4-4;S1097-p VPESSPHSPCEGLPS 0.254208761634429 0.685086262726147 -0.179 -0.0536666666666666 11.322069424383 2.24864932260208 -0.179 -0.0536666666666666 0.073755270062342 0.595847426223053 -2.21263234326281 -0.563120805205952 A7E2V4 ZSWIM8 A7E2V4.4.S1097.p_ZSWIM8 A7E2V4-4_S1097s _1_1_1097_1097 A7E2V4-4 A7E2V4-2|A7E2V4-4|A7E2V4-3|S4R410|A7E2V4-5|S4R393|S4R3H3|H7BZ52 Isoform 4 of Zinc finger SWIM domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13862.13862.4 22.48 18.51 2.799 6 1 1 0 955.9799 3740.943 S1097s TMT10 1089 (K) NVPESSPHsPCEGLPSEAALTPRPEGKVPSR (L) NVPES(0.0)S(0.0)PHS(0.99)PCEGLPS(0.0)EAALT(0.0)PRPEGKVPS(0.0)R C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZSWIM8 199945.4 2 10 805.1 222.5 HUMAN 1 -11.3221 -2.2486 VPEVRSKSFDYGNLS-p P31629;S1050-p VPEVRSKSFDYGNLS 0.769995010044579 0.435222109765082 0.0536666666666667 -0.0843333333333333 2.17452711758985 4.81404872352214 0.0536666666666667 -0.0818118077600846 0.606104192709753 0.330061696543722 0.547114575881723 -1.06965933265603 P31629 HIVEP2 P31629.S1050.p_HIVEP2 P31629_S1050s _1_1_1050_1050 P31629 P31629 Transcription factor HIVEP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.17803.17803.3 12.41 12.41 1.649 8 1 1 0 896.4268 2607.3001 S1050s TMT10 1050 (K) sFDYGNLSHAPVSGAAASTVSPSR (E) S(0.99)FDY(0.0)GNLS(0.0)HAPVS(0.0)GAAAS(0.0)T(0.0)VS(0.0)PS(0.0)R s:Phosphorylated S HIVEP2 271273.5 1 8 465.2 303.46 HUMAN 1 2.1745 -4.814 VPFFKVGSGDTNNFP-p Q9NR45;S134-p VPFFKVGSGDTNNFP 0.676629871884063 0.0400978302262368 -0.0706666666666667 0.258333333333333 3.1774751284934 18.7291471879825 -0.0706666666666667 0.258333333333333 0.48111897681237 0.0133993978184864 -0.756234637119051 3.60825749572318 Q9NR45 NANS Q9NR45.S134.p_NANS Q9NR45_S134s _1_1_134_134 Q9NR45 Q9NR45 Sialic acid synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23473.23473.3 14.82 10.45 1.134 3 1 1 0 693.6776 1999.0537 S134s TMT10 132 (K) VGsGDTNNFPYLEK (T) VGS(0.99)GDT(0.0)NNFPY(0.0)LEK K:TMT10,s:Phosphorylated S NANS 40763.2 1 1 3864.1 41.56 HUMAN 1 -3.1775 18.7291 VPFHLALSDKKSERA-p Q9H2M9;S544-p VPFHLALSDKKSERA 0.197169182192768 0.0483787683066092 -0.207666666666667 -0.236 13.7452933696098 17.5905611722547 -0.207666666666667 -0.236 0.042215376124295 0.017415818209023 -2.64627187177032 -3.37718568810357 Q9H2M9 RAB3GAP2 Q9H2M9.S544.p_RAB3GAP2 Q9H2M9_S544s _1_1_544_544 Q9H2M9 Q9H2M9 Rab3 GTPase-activating protein non-catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23229.23229.4 15.27 15.27 10.365 2 1 1 0 584.8394 2256.3683 S544s TMT10 534 (K) TVNVPFHLALsDKK (S) T(0.0)VNVPFHLALS(0.99)DKK K:TMT10,s:Phosphorylated S RAB3GAP2 157579.4 2 3 1674.1 121.94 HUMAN 1 -13.7453 -17.5906 VPFIHVPSPAVPKLS-p O75427;S589-p VPFIHVPSPAVPKLS 0.529758132552582 0.0268584189891589 -0.120333333333333 -0.373666666666667 5.10553227237604 21.3230876883324 -0.120333333333333 -0.373666666666667 0.308636135730222 0.00737379791383249 -1.12336274322377 -4.16459914625125 O75427 LRCH4 O75427.S589.p_LRCH4 O75427_S589s _1_1_589_589 O75427 O75427|C9JYK0 Leucine-rich repeat and calponin homology domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24706.24706.4 7.96 7.96 7.961 2 1 1 0 504.0388 1933.1675 S589s TMT10 581 (R) SVPFIHVPsPAVPK (L) S(0.0)VPFIHVPS(0.99)PAVPK K:TMT10,s:Phosphorylated S LRCH4 74133.6 1 8 1458.1 140.35 HUMAN 1 -5.1055 -21.3231 VPFRPRRSPRMSLRS-p A6NHB5;S289-p VPFRPRRSPRMSLRS 0.996377054095677 0.048037171009988 0.00133333333333332 0.279666666666667 0.0308834661657608 17.6304590547223 0.00133333333333333 0.279666666666667 0.992914043737745 0.0172565547839815 0.00929866179040058 3.38515974918978 A6NHB5 NotFound A6NHB5.S289.p_NotFound A6NHB5_S265sS269sS289s_3_3_265_289 A6NHB5 A6NHB5|Q14202|Q14202-2 Zinc finger MYM-type protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21456.21456.5 12.58 12.58 7.069 6 3 3 0 1159.537 5553.7233 S265s S269s S289s TMT10 247 (R) RAEPPKPEVVDSTESIPVsDEDsDAMVDDPNDEDFVPFRPRRsPR (M) RAEPPKPEVVDS(0.0)T(0.0)ES(0.0)IPVS(0.99)DEDS(0.99)DAMVDDPNDEDFVPFRPRRS(0.99)PR K:TMT10,s:Phosphorylated S ZMYM3 156426.3 1 19 331.1 357.99 HUMAN 1 0.0309 17.6305 VPGGLQGSQDRGAAG-p P49750-4;S1100-p VPGGLQGSQDRGAAG 0.703771680180251 0.0178198414379202 -0.104 -0.436 2.86761079406087 24.0892869126404 -0.104 -0.436 0.51670054615098 0.00390006018236391 -0.693391846958041 -4.81103620688314 P49750 YLPM1 P49750.4.S1100.p_YLPM1 P49750-4_S1100s _1_1_1100_1100 P49750-4 P49750-4|P49750-3 Isoform 4 of YLP motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7557.7557.3 12.85 6.82 3.213 2 1 1 0 641.3206 1841.9779 S1100s TMT10 1093 (K) VPGGLQGsQDRGAAGSR (E) VPGGLQGS(0.99)QDRGAAGS(0.0)R s:Phosphorylated S YLPM1 241869.3 6 11 669.1 249.34 HUMAN 1 -2.8676 -24.0893 VPGGSPKSPANGAVT-p Q96DR7;S127-p VPGGSPKSPANGAVT 0.149214344489706 0.00774620725295617 -0.237333333333333 -0.497 16.651997047097 30.1344633229477 -0.237333333333333 -0.497 0.0216172425415841 0.000969513068950062 -3.1944033813329 -6.46283437218326 Q96DR7 ARHGEF26 Q96DR7.S127.p_ARHGEF26 Q96DR7_S124sS127s_2_2_124_127 Q96DR7 Q96DR7|Q96DR7-4|Q96DR7-3 Rho guanine nucleotide exchange factor 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.24019.24019.4 15.87 13.55 2.607 3 2 2 0 878.9726 3352.9622 S124s S127s TMT10 119 (K) AVPGGsPKsPANGAVTLPAPPPPPVLRPPR (T) AVPGGS(0.99)PKS(0.99)PANGAVT(0.0)LPAPPPPPVLRPPR K:TMT10,s:Phosphorylated S ARHGEF26 97914.4 1 15 478.1 300.31 HUMAN 1 -16.652 -30.1345 VPGGSPRTPNRSVSS-p Q9Y6G9;T408-p VPGGSPRTPNRSVSS 0.590799870434108 0.00960180903212433 -0.176333333333333 -0.57 4.21180665340794 28.4522808509671 -0.176333333333333 -0.57 0.379157223772688 0.00142814372137053 -0.95740624015953 -5.96588269942991 Q9Y6G9 DYNC1LI1 Q9Y6G9.T408.p_DYNC1LI1 Q9Y6G9_T408t _1_1_408_408 Q9Y6G9 Q9Y6G9 Cytoplasmic dynein 1 light intermediate chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.4526.4526.3 8.25 3.76 1.114 2 1 1 0 482.9193 1366.7753 T408t TMT10 401 (R) VPGGSPRtPNR (S) VPGGS(0.0)PRT(0.99)PNR t:Phosphorylated T DYNC1LI1 56863.4 1 9 510.1 287.75 HUMAN 1 -4.2118 -28.4523 VPGLLDQSNPLSTPM-p Q8WUA4;S132-p VPGLLDQSNPLSTPM 0.907362848442901 0.00885809255924247 -0.0203333333333333 -0.580333333333333 0.828590643502082 29.0920808535477 -0.0203333333333333 -0.580333333333333 0.826306055878028 0.00123251415200587 -0.230311706748665 -6.15120962365331 Q8WUA4 GTF3C2 Q8WUA4.S132.p_GTF3C2 Q8WUA4_S132s _1_1_132_132 Q8WUA4 Q8WUA4|Q8WUA4-2|A0A087WZD8 General transcription factor 3C polypeptide 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.27819.27819.5 22.87 16.54 2.624 4 1 1 0 723.7874 3534.9507 S132s TMT10 113 (K) RPQQPNPPSAPLVPGLLDQsNPLSTPMPK (K) RPQQPNPPS(0.0)APLVPGLLDQS(0.99)NPLS(0.0)T(0.0)PMPK K:TMT10,s:Phosphorylated S GTF3C2 101761.7 5 3 753.1 231.45 HUMAN 1 -0.8286 -29.0921 VPGNRPGSVIRVYGD-p O60271;S1188-p VPGNRPGSVIRVYGD 0.0614259829561859 0.0547558804123095 -0.399333333333333 -0.241666666666667 26.3964535736748 16.8135873536641 -0.399333333333333 -0.241666666666667 0.00229273912748414 0.0208276976556872 -5.40637422520493 -3.22358610729026 O60271 SPAG9 O60271.S1188.p_SPAG9 O60271_S1188s _1_1_1188_1188 O60271 O60271|A0A087X2D8|O60271-2 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7918.7918.3 7.29 5.48 5.211 3 1 1 0 569.3026 1625.9285 S1188s TMT10 1178 (K) TSGVPGNRPGsVIR (V) T(0.0)S(0.0)GVPGNRPGS(0.99)VIR s:Phosphorylated S SPAG9 147001.6 2 38 84.1 629.25 HUMAN 1 -26.3965 -16.8136 VPGPELDSGASVEEA-p X6RAB3;S584-p VPGPELDSGASVEEA 0.811737876665422 0.0721929565362957 0.0343333333333333 0.280333333333333 1.74182456295189 15.1688873298085 0.0343333333333333 0.280333333333333 0.66960323583675 0.0304166420564093 0.450836522561737 2.9082625291566 X6RAB3 NotFound X6RAB3.S584.p_NotFound X6RAB3_S584s _1_1_584_584 X6RAB3 X6RAB3|Q92738-2 USP6 N-terminal-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.23004.23004.3 20.83 21.8 2.509 6 1 1 0 1029.8092 3007.433 S584s TMT10 568 (R) GSTASQYDNVPGPELDsGASVEEALER (A) GS(0.0)T(0.0)AS(0.0)QY(0.0)DNVPGPELDS(0.99)GAS(0.0)VEEALER s:Phosphorylated S USP6NL 96835.5 1 7 364.1 342.41 HUMAN 1 1.7418 15.1689 VPGPRSRSPSLNRLG-p Q9UPX8-3;S475-p VPGPRSRSPSLNRLG 0.605173265345025 0.0438947552864774 -0.132333333333333 0.450333333333333 4.03016965657511 18.1866978293186 -0.132333333333333 0.450333333333333 0.395351175424155 0.0151820429974578 -0.922892182697257 3.49724771395159 Q9UPX8 SHANK2 Q9UPX8.3.S475.p_SHANK2 Q9UPX8-3_S475s _1_1_475_475 Q9UPX8-3 Q9UPX8-3 Isoform 3 of SH3 and multiple ankyrin repeat domains protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.3748.3748.3 9.87 9.87 1.371 3 1 1 0 409.2132 1145.6588 S475s TMT10 473 (R) SRsPSLNR (L) S(0.0)RS(0.99)PS(0.0)LNR s:Phosphorylated S SHANK2 202341.2 1 6 86.1 628.23 HUMAN 1 -4.0302 18.1867 VPIGEGDSVDVPQDS-p Q5VTI5;S994-p VPIGEGDSVDVPQDS 0.718491908903476 0.0855947378764516 -0.0553333333333333 -0.246333333333333 2.70933098271639 14.1277884603059 -0.0553333333333334 -0.246333333333333 0.53587920169715 0.0386563775202985 -0.660729447803144 -2.71476438073574 Q5VTI5 NotFound Q5VTI5.S994.p_NotFound Q5VTI5_S994s _1_1_994_994 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22535.22535.4 22.52 17.01 4.822 5 1 1 0 950.2037 3717.8166 S994s TMT10 981 (K) SSMQNVVPIGEGDsVDVPQDSESQLQEQEK (R) S(0.0)S(0.0)MQNVVPIGEGDS(0.99)VDVPQDS(0.0)ES(0.0)QLQEQEK K:TMT10,s:Phosphorylated S PLEKHA6 119745.7 1 34 52.1 743.36 HUMAN 1 -2.7093 -14.1278 VPIKRNLSDLLEKVK-p Q7Z4H8;S421-p VPIKRNLSDLLEKVK 0.507633728896818 0.0095308585684715 -0.146666666666667 -0.64 5.4310788478745 28.5076406739318 -0.146666666666667 -0.64 0.286346655664334 0.0014100546094684 -1.18250183050122 -5.98174452699989 Q7Z4H8 KDELC2 Q7Z4H8.S421.p_KDELC2 Q7Z4H8_S421s _1_1_421_421 Q7Z4H8 Q7Z4H8|Q7Z4H8-2|Q7Z4H8-3 KDEL motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.25767.25767.2 11.18 2.49 99 1 1 1 0 735.4032 1389.8354 S421s TMT10 419 (R) NLsDLLEK (V) NLS(1.0)DLLEK K:TMT10,s:Phosphorylated S KDELC2 58970.8 1 1 6523.1 11.18 HUMAN 1 -5.4311 -28.5076 VPIPVDRSCGGL___-p P43304;S723-p VPIPVDRSCGGL___ 0.357172198749098 0.367976076447656 0.169 0.101333333333333 8.31050517491656 5.75716770939247 0.169 0.101333333333333 0.147553488786027 0.265633735155897 1.68898661158782 1.24089755103808 P43304 GPD2 P43304.S723.p_GPD2 P43304_S723s _1_1_723_723 P43304 P43304|P43304-2 Glycerol-3-phosphate dehydrogenase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16633.16633.3 10.7 5.33 99 1 1 1 0 578.968 1654.926 S723s TMT10 715 (R) RVPIPVDRsCGGL (-) RVPIPVDRS(1.0)CGGL C:Carbamidomethylation,s:Phosphorylated S GPD2 81364.8 2 1 6597.1 10.7 HUMAN 1 8.3105 5.7572 VPKAERLSPPAPSGS-p Q9NP71;S602-p VPKAERLSPPAPSGS 0.347288018544737 0.31520680144833 0.130333333333333 -0.120333333333333 8.53462719327618 6.62675733471196 0.130333333333333 -0.120333333333333 0.140131987176611 0.217432403474828 1.72780234213747 -1.39514242964146 Q9NP71 MLXIPL Q9NP71.S602.p_MLXIPL Q9NP71_S602s _1_1_602_602 Q9NP71 Q9NP71|Q9NP71-3|Q9NP71-2|Q9NP71-4 Carbohydrate-responsive element-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.7924.8127.3 14.03 9.18 5.505 3 1 1 0 588.2949 1682.9023 S602s TMT10 598 (K) AERLsPPAPSGSER (R) AERLS(0.99)PPAPS(0.0)GS(0.0)ER s:Phosphorylated S MLXIPL 93755.5 2 12 1023.1 187.4 HUMAN 1 8.5346 -6.6268 VPKEDIYSGGGGGGS-p Q13151;S181-p VPKEDIYSGGGGGGS 0.767078791435255 0.122241979077937 0.0476666666666667 -0.195666666666667 2.20546437250177 12.0378679189477 0.0476666666666667 -0.195666666666667 0.601801911356537 0.0625479684033142 0.553837684610663 -2.33788224973357 Q13151 HNRNPA0 Q13151.S181.p_HNRNPA0 Q13151_S181s _1_1_181_181 Q13151 Q13151 Heterogeneous nuclear ribonucleoprotein A0 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11139.11139.3 11.49 11.49 1.121 3 1 1 0 715.6967 2065.1078 S181s TMT10 173 (K) AVPKEDIYsGGGGGGSR (S) AVPKEDIY(0.0)S(0.99)GGGGGGS(0.0)R K:TMT10,s:Phosphorylated S HNRNPA0 31011.2 1 5 2372.1 86.26 HUMAN 1 2.2055 -12.0379 VPKGPIHSPVELKHV-p Q16649;S301-p VPKGPIHSPVELKHV 0.0431670381948327 0.0257729799287224 -1.05033333333333 -0.454666666666667 30.261597130409 21.6078814132553 -1.05033333333333 -0.454666666666667 0.000941543277606988 0.00690576600575546 -6.51211159014543 -4.22846410706717 Q16649 NFIL3 Q16649.S301.p_NFIL3 Q16649_S301s _1_1_301_301 Q16649 Q16649 Nuclear factor interleukin-3-regulated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14189.14189.3 10.01 10.01 99 1 1 1 0 538.9721 1534.9357 S301s TMT10 297 (K) GPIHsPVELK (H) GPIHS(1.0)PVELK K:TMT10,s:Phosphorylated S NFIL3 51641.9 1 2 4069.1 38.22 HUMAN 1 -30.2616 -21.6079 VPKHSAGSGAEESNS-p Q8IYL3;S148-p VPKHSAGSGAEESNS 0.0956171041021503 0.267363829952173 0.313666666666667 0.155333333333333 21.6210070601337 7.54399113072811 0.313666666666667 0.155333333333333 0.00688492627294536 0.176035754865926 4.23579719713146 1.55547564824346 Q8IYL3 C1orf174 Q8IYL3.S148.p_C1orf174 Q8IYL3_S148s _1_1_148_148 Q8IYL3 Q8IYL3 UPF0688 protein C1orf174 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4722.4722.3 20.04 20.04 2.7 7 1 1 0 767.6971 2221.1097 S148s TMT10 144 (K) HSAGsGAEESNSSSTVQK (Q) HS(0.0)AGS(0.99)GAEES(0.0)NS(0.0)S(0.0)S(0.0)T(0.0)VQK K:TMT10,s:Phosphorylated S C1orf174 26318.8 1 2 2485.1 81.6 HUMAN 1 21.621 7.544 VPKKDDVSPVMQFSS-p Q8IZE3-2;S653-p VPKKDDVSPVMQFSS 0.401283883850043 0.351305061269748 -0.117666666666667 -0.112333333333333 7.32015218357384 6.02173321571797 -0.117666666666667 -0.112333333333333 0.185346667390791 0.249934770378778 -1.51694593788892 -1.28812679605847 Q8IZE3 SCYL3 Q8IZE3.2.S653.p_SCYL3 Q8IZE3-2_S653s _1_1_653_653 Q8IZE3-2 Q8IZE3|Q8IZE3-2 Isoform 2 of Protein-associating with the carboxyl-terminal domain of ezrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18381.18381.3 16.45 16.45 6.078 3 1 1 0 745.7283 2155.2036 S653s TMT10 649 (K) KDDVsPVMQFSSK (F) KDDVS(0.99)PVMQFS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SCYL3 77470.8 10 4 1163.1 171.02 HUMAN 1 -7.3202 -6.0217 VPKPCQASPPRLGVC-p F8VUX9;S1046-p VPKPCQASPPRLGVC 0.892926925432374 0.072756626642744 -0.0296666666666667 -0.275666666666667 0.963071806676868 15.1242057453594 -0.0296666666666667 -0.275666666666667 0.801111229263522 0.0307311933789559 -0.264589554276761 -2.89986715244347 F8VUX9 NotFound F8VUX9.S1046.p_NotFound F8VUX9_S1046s _1_1_1046_1046 F8VUX9 F8VUX9|Q96KV7 WD repeat-containing protein 90 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8242.8242.3 13.36 13.36 99 1 1 1 0 677.6923 1951.0948 S1046s TMT10 1037 (R) QQVPKPCQAsPPR (L) QQVPKPCQAS(1.0)PPR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S WDR90 191043 1 2 4129.1 37.01 HUMAN 1 -0.9631 -15.1242 VPKQRKGSKVGDFGD-p Q6PKG0;S165-p VPKQRKGSKVGDFGD 0.233156511585054 0.0423146480480125 0.766666666666667 -0.490666666666667 12.1484186373269 18.3995470876702 0.766666666666667 -0.490666666666667 0.0609758883575974 0.0144559051906502 2.35868787684855 -3.54060202862394 Q6PKG0 LARP1 Q6PKG0.S165.p_LARP1 Q6PKG0_S165s _1_1_165_165 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21703.21703.5 19.38 19.38 7.846 2 1 1 0 639.1449 3111.7194 S165s Hydrogen 163 (R) KGsKVGDFGDAINWPTPGEIAHK (S) KGS(0.99)KVGDFGDAINWPT(0.0)PGEIAHK K:TMT10-Lys-Only,s:Phosphorylated S LARP1 123907.4 3 35 28.1 931.95 HUMAN 1 12.1484 -18.3995 VPKQRKLSASYEKEK-p Q9Y297;S127-p VPKQRKLSASYEKEK 0.026747851046075 0.161322713750725 -0.782333333333333 -0.471666666666667 36.5683582903505 10.4180658378095 -0.782333333333333 -0.471666666666667 0.000220375936548055 0.090822492472421 -8.70779390377526 -2.05357582309226 Q9Y297 BTRC Q9Y297.S127.p_BTRC Q9Y297_S127s _1_1_127_127 Q9Y297 Q9Y297 F-box/WD repeat-containing protein 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7995.7995.3 7.73 7.73 1.156 3 1 1 0 488.6018 1383.8248 S127s Hydrogen 125 (R) KLsASYEK (E) KLS(0.99)AS(0.0)Y(0.0)EK K:TMT10-Lys-Only,s:Phosphorylated S BTRC 70291.9 1 1 7099.1 7.73 HUMAN 1 -36.5684 -10.4181 VPKTHLMSESEWRNL-p P61024;S39-p VPKTHLMSESEWRNL 0.129164060549054 0.375556548261524 -0.268 -0.096 18.4102755311463 5.64688228449876 -0.268 -0.096 0.0144202386173899 0.272465658406223 -3.54577825616872 -1.2211185264382 P61024 CKS1B P61024.S39.p_CKS1B P61024_S39s _1_1_39_39 P61024 P61024|Q5T179|Q9BZU3 Cyclin-dependent kinases regulatory subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14118.14118.3 13.17 13.17 2.224 3 1 1 0 528.9085 1504.7416 S39s TMT10 35 (K) THLMsESEWR (N) T(0.0)HLMS(0.99)ES(0.0)EWR s:Phosphorylated S CKS1B 9660 1 1 3871.1 41.51 HUMAN 1 -18.4103 -5.6469 VPLADVKSEKTKKGR-p P42167;S402-p VPLADVKSEKTKKGR 0.252651211577592 0.511926781207053 -0.497666666666667 -0.0736666666666666 11.3959853342442 3.90062674161516 -0.497666666666667 -0.0736666666666667 0.0725105946234252 0.407321491942971 -2.22563386547537 -0.897936707193545 P42167 TMPO P42167.S402.p_TMPO P42167_S402s _1_1_402_402 P42167 P42167|G5E972|P42167-2 Lamina-associated polypeptide 2, isoforms beta/gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19019.19019.3 9.44 9.44 5.188 2 1 1 0 672.7172 1936.1722 S402s TMT10 394 (K) YVPLADVKsEK (T) Y(0.0)VPLADVKS(0.99)EK K:TMT10,s:Phosphorylated S TMPO 50726.4 1 45 123.2 546.19 HUMAN 1 -11.396 -3.9006 VPLIGRASPPPTYSP-p Q9BSA4;S504-p VPLIGRASPPPTYSP 0.403504072252795 0.189480411700302 -0.118 -0.135333333333333 7.27628177432026 9.49966477645684 -0.118 -0.135333333333333 0.187228441648257 0.112210506408727 -1.50929346637461 -1.89417694985682 Q9BSA4 TTYH2 Q9BSA4.S504.p_TTYH2 Q9BSA4_S504s _1_1_504_504 Q9BSA4 Q9BSA4|B4DKD1|Q9BSA4-2 Protein tweety homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21384.21384.3 13.99 9.96 2.519 6 1 1 0 881.1056 2561.3384 S504s TMT10 494 (R) YENVPLIGRAsPPPTYSPSMR (A) Y(0.0)ENVPLIGRAS(0.99)PPPT(0.0)Y(0.0)S(0.0)PS(0.0)MR s:Phosphorylated S TTYH2 59855.3 2 1 6098.1 13.99 HUMAN 1 -7.2763 -9.4997 VPLLRKESIQLRDLD-p Q04912;S1056-p VPLLRKESIQLRDLD 0.739118396287836 0.0159687474040441 -0.0656666666666667 0.394666666666667 2.4885477148298 24.8233354849784 -0.0656666666666667 0.394666666666667 0.563826168349686 0.00329356661261153 -0.614468397856261 4.99299722944505 Q04912 MST1R Q04912.S1056.p_MST1R Q04912_S1056s _1_1_1056_1056 Q04912 Q04912|Q04912-2|A0A087WZG2|A0A087WZQ8 Macrophage-stimulating protein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.26392.26392.4 12.92 13.93 1.19 2 1 1 0 642.3621 2486.4594 S1056s Hydrogen 1054 (R) KEsIQLRDLDSALLAEVK (D) KES(0.99)IQLRDLDS(0.0)ALLAEVK K:TMT10-Lys-Only,s:Phosphorylated S MST1R 154836.1 6 2 2414.1 84.51 HUMAN 1 -2.4885 24.8233 VPLPGPGSPEVKRAH-p Q8WXD9;S1257-p VPLPGPGSPEVKRAH 0.181080338359562 0.734672656623469 -0.273666666666667 0.0466666666666667 14.6309477195517 1.84634120164633 -0.273666666666667 0.0466666666666667 0.0344274794750708 0.653681027034407 -2.80951741947197 0.474444176313735 Q8WXD9 CASKIN1 Q8WXD9.S1257.p_CASKIN1 Q8WXD9_S1257s _1_1_1257_1257 Q8WXD9 Q8WXD9 Caskin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.17423.17423.3 17.87 17.87 99 1 1 1 0 691.4093 1992.2461 S1257s TMT10 1249 (K) KVPLPGPGsPEVK (R) KVPLPGPGS(1.0)PEVK K:TMT10,s:Phosphorylated S CASKIN1 150381.5 2 8 1881.1 109.29 HUMAN 1 -14.6309 1.8463 VPLPRRESPSEERLE-p A0A1C7CYX1;S923-p VPLPRRESPSEERLE 0.469182446038924 0.0259260790018031 0.120333333333333 0.350666666666667 6.06740105541841 21.5690081665794 0.120333333333333 0.350666666666667 0.247320373935631 0.00696785626508155 1.29656163823865 4.21971226738726 A0A1C7CYX1 NotFound A0A1C7CYX1.S923.p_NotFound A0A1C7CYX1_S923s _1_1_923_923 A0A1C7CYX1 A0A1C7CYX1|Q6PJG2 ELM2 and SANT domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5406.5406.3 13.76 10.37 1.755 2 1 1 0 589.2944 1685.902 S923s Hydrogen 921 (R) REsPSEERLEPK (R) RES(0.99)PS(0.0)EERLEPK K:TMT10-Lys-Only,s:Phosphorylated S ELMSAN1 121244.8 7 10 548.1 275.48 HUMAN 1 6.0674 21.569 VPLRKSNSEGDLDGL-p P51523;S128-p VPLRKSNSEGDLDGL 0.321443503795338 0.131252221120146 -0.258 0.293333333333333 9.22299167121341 11.6260330580461 -0.258 0.293333333333333 0.11959164311893 0.0687696310251215 -1.84697087791867 2.26508447565638 P51523 ZNF84 P51523.S128.p_ZNF84 P51523_S128s _1_1_128_128 P51523 P51523|F5H630 Zinc finger protein 84 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.25555.25555.2 12.77 12.77 2.426 2 1 1 0 949.9975 1819.0213 S128s TMT10 126 (K) SNsEGDLDGLILK (H) S(0.0)NS(0.99)EGDLDGLILK K:TMT10,s:Phosphorylated S ZNF84 87795.2 3 45 240.62 415.72 HUMAN 1 -9.223 11.626 VPLTTVVTPEKPIPI-p Q9NRY4;T1256-p VPLTTVVTPEKPIPI 0.234787342649998 0.0452196882542673 -0.203666666666667 -0.265666666666667 12.0667403596446 17.9937453675489 -0.203666666666667 -0.265666666666667 0.0621335208572369 0.0158717737207745 -2.34417806106616 -3.45816971298735 Q9NRY4 ARHGAP35 Q9NRY4.T1256.p_ARHGAP35 Q9NRY4_T1256t_1_1_1256_1256 Q9NRY4 Q9NRY4 Rho GTPase-activating protein 35 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36350.36350.4 13.23 13.23 1.614 6 1 1 0 936.7488 3663.0238 N1245n T1256t TMT10 1240 (K) ATWESnYFGVPLTTVVtPEKPIPIFIER (C) AT(0.0)WES(0.0)N(1.0)Y(0.0)FGVPLT(0.0)T(0.0)VVT(0.99)PEKPIPIFIER K:TMT10,n:Deamidated,t:Phosphorylated T ARHGAP35 172051.4 1 16 247.1 410.47 HUMAN 1 -12.0667 -17.9937 VPNDYVPSPTRNMAP-p Q9NYB9-2;S210-p VPNDYVPSPTRNMAP 0.391178814803887 0.00714231278100688 -0.152333333333333 -0.658333333333333 7.52704315322354 30.7173654159844 -0.152333333333333 -0.658333333333333 0.176724061775046 0.000847741528195865 -1.55298982098104 -6.64252608019595 Q9NYB9 ABI2 Q9NYB9.2.S210.p_ABI2 Q9NYB9-2_S210s _1_1_210_210 Q9NYB9-2 Q9NYB9|F8WAL6|Q9NYB9-4|A0A0C4DG21|E7EW77|Q9NYB9-2|Q9NYB9-3|B7Z836 Isoform 2 of Abl interactor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.21122.21122.3 18.01 18.01 1.355 4 1 1 0 848.1152 2462.3605 S210s TMT10 194 (R) TLEPVRPPVVPNDYVPsPTR (N) T(0.0)LEPVRPPVVPNDY(0.0)VPS(0.99)PT(0.0)R s:Phosphorylated S ABI2 52501.9 3 5 1041.1 185.01 HUMAN 1 -7.527 -30.7174 VPNIDRISPEKKGEK-p Q9ULD2;S663-p VPNIDRISPEKKGEK 0.78149643092872 0.0639321812684571 0.0393333333333333 -0.326 2.0548811573611 15.9003904884861 0.0393333333333333 -0.326 0.62303419623305 0.0257016468039992 0.520921852238986 -3.04695111844057 Q9ULD2 MTUS1 Q9ULD2.S663.p_MTUS1 Q9ULD2_S663s _1_1_663_663 Q9ULD2 Q9ULD2|Q9ULD2-2|Q9ULD2-5 Microtubule-associated tumor suppressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21916.21916.5 15.19 15.19 1.396 4 1 1 0 811.024 3971.1098 S663s TMT10 645 (K) MESAECLEMTYVPNIDRIsPEKKGEK (E) MES(0.0)AECLEMT(0.0)Y(0.0)VPNIDRIS(0.99)PEKKGEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MTUS1 142763.7 4 4 645.1 254.81 HUMAN 1 2.0549 -15.9004 VPNRQKGSPDEYHLR-p Q8IYW5;S470-p VPNRQKGSPDEYHLR 0.569424170722203 0.00586646176161149 -0.08 -0.558666666666667 4.49987186277075 32.2568216922779 -0.08 -0.558666666666667 0.354823858046146 0.000594727240055166 -1.01155351299307 -7.13681070342195 Q8IYW5 RNF168 Q8IYW5.S470.p_RNF168 Q8IYW5_S470s _1_1_470_470 Q8IYW5 Q8IYW5 E3 ubiquitin-protein ligase RNF168 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6899.6899.4 16.07 16.07 5.138 2 1 1 0 467.7423 1787.9805 S470s TMT10 467 (R) QKGsPDEYHLR (A) QKGS(0.99)PDEY(0.0)HLR K:TMT10,s:Phosphorylated S RNF168 66159.9 4 7 1172.1 170.1 HUMAN 1 -4.4999 -32.2568 VPNSCPASPRGAGSS-p P85037;S257-p VPNSCPASPRGAGSS 0.155934634686553 0.159223481457119 -0.263666666666667 -0.142 16.222356032468 10.4971521552538 -0.263666666666667 -0.142 0.0238651625489823 0.0891835559115923 -3.11100221173782 -2.06734760246226 P85037 FOXK1 P85037.S257.p_FOXK1 P85037_S257s _1_1_257_257 P85037 P85037|P85037-2 Forkhead box protein K1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22249.22249.3 17.2 15.98 2.131 8 1 1 0 912.1117 2654.3479 S257s TMT10 236 (R) SMVSPVPSPTGTISVPNSCPAsPR (G) S(0.0)MVS(0.0)PVPS(0.0)PT(0.0)GT(0.0)IS(0.0)VPNS(0.0)CPAS(0.99)PR C:Carbamidomethylation,s:Phosphorylated S FOXK1 75912.4 5 5 686.1 243.66 HUMAN 1 -16.2224 -10.4972 VPPAPEKSIVGMTKV-p O60749;S212-p VPPAPEKSIVGMTKV 0.133453192058963 0.0202621314294999 -0.446666666666667 0.349333333333333 18.0061608920392 23.1848058872502 -0.446666666666667 0.349333333333333 0.0158264646041963 0.00480307547640066 -3.46351224149072 4.59305407054447 O60749 SNX2 O60749.S212.p_SNX2 O60749_S212s _1_1_212_212 O60749 O60749|O60749-2 Sorting nexin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16300.16300.2 9.75 3.72 3.873 2 1 1 0 637.3529 1193.7328 S212s TMT10 212 (K) sIVGMTK (V) S(0.99)IVGMT(0.0)K K:TMT10,s:Phosphorylated S SNX2 58584.2 1 3 1560.2 131.56 HUMAN 1 -18.0062 23.1848 VPPARSPSPPPKVVD-p P54259;S748-p VPPARSPSPPPKVVD 0.883910399642057 0.203927140379653 0.0326666666666667 -0.185 1.05777842625724 9.08517084906634 0.0326666666666667 -0.185 0.783830497951559 0.12344767505774 0.288309396978398 -1.82244514034485 P54259 ATN1 P54259.S748.p_ATN1 P54259_S739sS746sS748s_3_3_739_748 P54259 P54259 Atrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16132.16132.4 15.35 15.35 2.129 5 3 3 0 854.3933 3174.6359 S739s S746s S748s TMT10 728 (K) QEPAEEYETPEsPVPPARsPsPPPK (V) QEPAEEY(0.0)ET(0.0)PES(0.99)PVPPARS(0.99)PS(0.99)PPPK K:TMT10,s:Phosphorylated S ATN1 125583.1 2 16 869.1 209.92 HUMAN 1 1.0578 -9.0852 VPPGRSYSPYDYQPC-p Q9HBL0;S794-p VPPGRSYSPYDYQPC 0.67705106710214 0.61230886644641 -0.0656666666666667 0.0516666666666667 3.17140448932257 2.89360799514796 -0.0656666666666667 0.0516666666666667 0.481791963018868 0.513616776066163 -0.75501656441817 0.698622704836659 Q9HBL0 TNS1 Q9HBL0.S794.p_TNS1 Q9HBL0_S794s _1_1_794_794 Q9HBL0 Q9HBL0|E9PF55|E9PGF5|A0A087WWW7 Tensin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18542.18542.3 20.89 20.89 2.356 6 1 1 0 1004.7913 2932.3976 S794s TMT10 792 (R) SYsPYDYQPCLAGPNQDFHSK (S) S(0.0)Y(0.0)S(0.99)PY(0.0)DY(0.0)QPCLAGPNQDFHS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TNS1 186610.9 3 31 183.2 477.16 HUMAN 1 -3.1714 2.8936 VPPPAIKSPTAQSKT-p Q9Y6N7-2;S1496-p VPPPAIKSPTAQSKT 0.441093698809202 0.106611257149702 0.143333333333333 -0.203333333333333 6.54576526922226 12.8422741318445 0.143333333333333 -0.203333333333333 0.221525371261554 0.0519723778039705 1.38124326861427 -2.48134232487117 Q9Y6N7 ROBO1 Q9Y6N7.2.S1496.p_ROBO1 Q9Y6N7-2_S1496s _1_1_1496_1496 Q9Y6N7-2 Q9Y6N7-2 Isoform 2 of Roundabout homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.19560.19560.4 13.77 15.11 1.339 6 1 1 0 893.2341 3489.956 S1496s TMT10 1477 (R) RETYTDDLPPPPVPPPAIKsPTAQSK (T) RET(0.0)Y(0.0)T(0.0)DDLPPPPVPPPAIKS(0.99)PT(0.0)AQS(0.0)K K:TMT10,s:Phosphorylated S ROBO1 182465.9 1 10 832.1 215.62 HUMAN 1 6.5458 -12.8423 VPPPAPGTPTGLPKG-p O00268;T396-p VPPPAPGTPTGLPKG 0.209850580534842 0.934839819947958 0.283 0.0113333333333333 13.08807664901 0.413026166827015 0.283 0.0113333333333334 0.0491125331656913 0.909279465305409 2.52695004385596 0.119371286036615 O00268 TAF4 O00268.T396.p_TAF4 O00268_T396t _1_1_396_396 O00268 O00268 Transcription initiation factor TFIID subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.31788.31788.5 23.39 23.39 1.476 9 1 1 0 1113.4009 5482.9959 T396t TMT10 349 (K) RVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGtPTGLPK (G) RVVQAAPPAAQT(0.0)LAAS(0.0)GPAS(0.0)T(0.0)AAS(0.0)MVIGPT(0.0)MQGALPS(0.0)PAAVPPPAPGT(0.99)PT(0.0)GLPK K:TMT10,t:Phosphorylated T TAF4 110397.6 1 3 1541.1 133.04 HUMAN 1 13.0881 0.413 VPPPLPPTPPQPARR-p Q9Y3L3;T626-p VPPPLPPTPPQPARR 0.929907092825432 0.283743287969831 0.0133333333333333 -0.104 0.626067212927348 7.21416036024668 0.0133333333333333 -0.104 0.865751551883997 0.189925799813007 0.177258515229891 -1.4980245924941 Q9Y3L3 SH3BP1 Q9Y3L3.T626.p_SH3BP1 Q9Y3L3_T626t _1_1_626_626 Q9Y3L3 Q9Y3L3 SH3 domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16339.16776.3 15.91 15.91 5.598 2 1 1 0 733.4103 2118.2385 T626t TMT10 616 (R) APTVPPPLPPtPPQPARR (Q) APT(0.0)VPPPLPPT(0.99)PPQPARR t:Phosphorylated T SH3BP1 76054.2 12 6 1166.1 170.58 HUMAN 1 0.6261 -7.2142 VPPQQQASPPQLPKA-p J3KNL6;S1069-p VPPQQQASPPQLPKA 0.376450887441092 0.41402863867439 0.135666666666667 0.0876666666666667 7.84803390979653 5.09447347553839 0.135666666666667 0.0876666666666667 0.164133265109526 0.309423042711503 1.60878704508322 1.12111277323862 J3KNL6 SEC16A J3KNL6.S1069.p_SEC16A J3KNL6_S1069s _1_1_1069_1069 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19388.19589.2 19.82 16.79 99 1 1 1 0 1311.7068 2542.4393 S1069s TMT10 1057 (R) AQQELVPPQQQAsPPQLPK (A) AQQELVPPQQQAS(1.0)PPQLPK K:TMT10,s:Phosphorylated S SEC16A 253486.5 7 22 15.1 1143.82 HUMAN 1 7.848 5.0945 VPPRYARSEIVGVSR-p Q99959;S197-p VPPRYARSEIVGVSR 0.0377486399398349 0.448798607940632 0.646 0.157333333333333 32.4278722278969 4.63778157146768 0.646 0.157333333333333 0.000571758694161947 0.343733486268189 7.20619637820395 1.03704392381216 Q99959 PKP2 Q99959.S197.p_PKP2 Q99959_S197s _1_1_197_197 Q99959 Q99959 Plakophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6315.6315.2 11.08 6.45 8.913 2 1 1 0 463.7217 846.468 S197s Hydrogen 197 (R) sEIVGVSR (A) S(0.99)EIVGVS(0.0)R s:Phosphorylated S PKP2 97926.6 2 11 257.1 399.17 HUMAN 1 32.4279 4.6378 VPPSKARSVSPPPKR-p Q13247;S314-p VPPSKARSVSPPPKR 0.570241028463784 0.257410691291377 0.086 0.110333333333333 4.48929821178266 7.76539316170304 0.086 0.110333333333333 0.355688790640484 0.16728641871098 1.00957799577935 1.59394465588859 Q13247 SRSF6 Q13247.S314.p_SRSF6 Q13247_S314sS316s_2_2_314_316 Q13247 Q13247 Serine/arginine-rich splicing factor 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5450.5663.2 10.04 10.04 99 2 2 2 0 664.3229 1167.7047 S314s S316s Hydrogen 312 (K) ARsVsPPPK (R) ARS(1.0)VS(1.0)PPPK K:TMT10-Lys-Only,s:Phosphorylated S SRSF6 39700.2 111 31 743.1 233.79 HUMAN 1 4.4893 7.7654 VPPTAPLTPLLHGEG-p Q7L2J0;T291-p VPPTAPLTPLLHGEG 0.498491882628924 0.971824130722009 0.141666666666667 -0.00466666666666667 5.57065387723199 0.175335478644043 0.141666666666667 -0.00466666666666669 0.277290258279937 0.960431625239522 1.20768200670671 -0.0519462779854951 Q7L2J0 MEPCE Q7L2J0.T291.p_MEPCE Q7L2J0_T291t _1_1_291_291 Q7L2J0 Q7L2J0 7SK snRNA methylphosphate capping enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11587.11587.5 24.19 22.83 4.153 5 1 1 0 848.8176 4160.0972 T291t TMT10 267 (R) GQHHQQQQAAGGSESHPVPPTAPLtPLLHGEGASQQPR (H) GQHHQQQQAAGGS(0.0)ES(0.0)HPVPPT(0.0)APLT(0.99)PLLHGEGAS(0.0)QQPR t:Phosphorylated T MEPCE 74981.5 3 11 428.1 317.7 HUMAN 1 5.5707 -0.1753 VPPVQPASPGSHNAL-p Q9Y4E6;S1456-p VPPVQPASPGSHNAL 0.684262317069592 0.425283797778635 -0.0546666666666667 -0.075 3.09030030161385 4.94162391161012 -0.0546666666666667 -0.075 0.490873932518299 0.32050706621055 -0.738694380843559 -1.09313068297779 Q9Y4E6 WDR7 Q9Y4E6.S1456.p_WDR7 Q9Y4E6_S1456s _1_1_1456_1456 Q9Y4E6 Q9Y4E6|Q9Y4E6-2|A2RRE0|K7EPQ4 WD repeat-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16044.16239.3 20.31 20.31 2.422 4 1 1 0 843.7828 2449.3604 S1456s TMT10 1446 (K) TYQVPPVQPAsPGSHNALK (L) T(0.0)Y(0.0)QVPPVQPAS(0.99)PGS(0.0)HNALK K:TMT10,s:Phosphorylated S WDR7 166260.7 2 4 2376.1 86.1 HUMAN 1 -3.0903 -4.9416 VPQALNFSPEESDST-p Q9NYZ3;S592-p VPQALNFSPEESDST 0.604804499151867 0.0827361607772573 0.0776666666666666 -0.218333333333333 4.03468927347117 14.3359861598186 0.0776666666666667 -0.218333333333333 0.394939955275893 0.0368469363391364 0.923754704548734 -2.75311772115398 Q9NYZ3 GTSE1 Q9NYZ3.S592.p_GTSE1 Q9NYZ3_S592s _1_1_592_592 Q9NYZ3 Q9NYZ3 G2 and S phase-expressed protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.25297.25297.3 14.02 13.15 2.617 5 1 1 0 841.0822 2441.26 S592s TMT10 585 (R) VPQALNFsPEESDSTFSK (S) VPQALNFS(0.99)PEES(0.0)DS(0.0)T(0.0)FS(0.0)K K:TMT10,s:Phosphorylated S GTSE1 77156.9 2 15 271.1 394.28 HUMAN 1 4.0347 -14.336 VPQCKPLSPGEILGC-p Q9BZG8;S212-p VPQCKPLSPGEILGC 0.840171742586902 0.0147104912964376 -0.0353333333333333 -0.396333333333333 1.4613222066372 25.3743164035392 -0.0353333333333334 -0.396333333333333 0.71427883125803 0.00290113781316786 -0.385903090467958 -5.13267700416132 Q9BZG8 DPH1 Q9BZG8.S212.p_DPH1 Q9BZG8_S212s _1_1_212_212 Q9BZG8 Q9BZG8|Q9BZG8-2|Q9BZG8-3 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.24163.24163.4 18.07 15.75 5.833 4 1 1 0 705.8701 2740.489 S212s TMT10 203 (R) VSVPQCKPLsPGEILGCTSPR (L) VS(0.0)VPQCKPLS(0.99)PGEILGCT(0.0)S(0.0)PR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DPH1 49375 2 1 4595.1 29.08 HUMAN 1 -1.4613 -25.3743 VPQPVQVSPSLLQAK-p Q6UB98-2;S1776-p VPQPVQVSPSLLQAK 0.952789431211013 0.184388752201514 -0.009 -0.145666666666667 0.414952745191162 9.65383414896261 -0.009 -0.145666666666667 0.908876188331666 0.108297039639533 -0.119916037076498 -1.92088059227932 Q6UB98 ANKRD12 Q6UB98.2.S1776.p_ANKRD12 Q6UB98-2_S1776s _1_1_1776_1776 Q6UB98-2 Q6UB98|Q6UB98-2 Isoform 2 of Ankyrin repeat domain-containing protein 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25396.25396.3 15.85 15.85 2.244 2 1 1 0 710.4106 2049.2472 S1776s TMT10 1769 (R) VPQPVQVsPSLLQAK (E) VPQPVQVS(0.99)PS(0.0)LLQAK K:TMT10,s:Phosphorylated S ANKRD12 234548.2 3 15 480.1 298.87 HUMAN 1 -0.415 -9.6538 VPQRGRSTRVPVASV-p Q9H2V7;T519-p VPQRGRSTRVPVASV 0.729445294623791 0.899440153281593 0.0733333333333333 0.0133333333333334 2.60166604283766 0.644506304212179 0.0733333333333334 0.0133333333333334 0.549330099122061 0.862083572775744 0.638276157332769 0.182147300242801 Q9H2V7 SPNS1 Q9H2V7.T519.p_SPNS1 Q9H2V7_T519t _1_1_519_519 Q9H2V7 H3BMF4|Q9H2V7|Q9H2V7-2|Q9H2V7-4|Q9H2V7-3 Protein spinster homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.20366.20366.3 12.35 12.35 1.5 3 1 1 0 555.3207 1583.9794 T519t TMT10 516 (R) GRStRVPVASVLI (-) GRS(0.0)T(0.99)RVPVAS(0.0)VLI t:Phosphorylated T SPNS1 57085.1 1 4 3159.1 59.03 HUMAN 1 2.6017 0.6445 VPRAKIHSLPPEGKL-p P10176;S28-p VPRAKIHSLPPEGKL 0.383576792762172 0.154815043190924 0.152333333333333 0.180666666666667 7.7052691122117 10.6537621547652 0.152333333333333 0.180666666666667 0.169618449429245 0.0860248223681889 1.58398709962921 2.09464597469715 P10176 COX8A P10176.S28.p_COX8A P10176_S28s _1_1_28_28 P10176 U3KQK5|P10176 Cytochrome c oxidase subunit 8A, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11692.11692.3 7.84 7.84 99 1 1 1 0 505.9496 1435.8673 S28s TMT10 26 (K) IHsLPPEGK (L) IHS(1.0)LPPEGK K:TMT10,s:Phosphorylated S COX8A 7636 1 1 7079.1 7.84 HUMAN 1 7.7053 10.6538 VPRASLLSFQDEEEE-p Q9Y5B6;S108-p VPRASLLSFQDEEEE 0.309869250687191 0.0231080215441591 0.146666666666667 0.332 9.51349693308715 22.3385579615257 0.146666666666667 0.332 0.111853687644433 0.00583638864503316 1.89729747763498 4.3950411309238 Q9Y5B6 PAXBP1 Q9Y5B6.S108.p_PAXBP1 Q9Y5B6_S108s_1_1_108_108 Q9Y5B6 Q9Y5B6|Q9Y5B6-2|Q9Y5B6-4|Q9Y5B6-3 PAX3- and PAX7-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.28956.28956.3 11.9 11.9 3.98 2 1 1 0 894.761 2601.2972 S108s N116n TMT10 104 (R) ASLLsFQDEEEEnEEVFK (V) AS(0.0)LLS(0.99)FQDEEEEN(1.0)EEVFK K:TMT10,s:Phosphorylated S,n:Deamidated PAXBP1 105258.2 1 3 978.1 192.69 HUMAN 1 9.5135 22.3386 VPRDFKLSDALAVED-p Q86UP2;S87-p VPRDFKLSDALAVED 0.134264480831341 0.595753915457302 0.306333333333333 -0.0563333333333333 17.9257567225637 3.04551946210342 0.306333333333333 -0.0563333333333333 0.0161222008671749 0.495961601598396 3.44725546435953 -0.729539456436722 Q86UP2 KTN1 Q86UP2.S87.p_KTN1 Q86UP2_S87s_1_1_87_87 Q86UP2 Q86UP2|Q86UP2-4|Q86UP2-3|Q86UP2-2 Kinectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27582.27582.5 11.7 9.98 1.335 8 1 1 0 1127.1707 5550.824 S87s N103n TMT10 66 (K) EIQNGNLHESDSESVPRDFKLsDALAVEDDQVAPVPLnVVETSSSVR (E) EIQN(0.0)GN(0.0)LHES(0.0)DS(0.0)ES(0.0)VPRDFKLS(0.99)DALAVEDDQVAPVPLN(0.99)VVET(0.0)S(0.0)S(0.0)S(0.0)VR K:TMT10,s:Phosphorylated S,n:Deamidated KTN1 156557.7 2 2 186.1 473.59 HUMAN 1 17.9258 -3.0455 VPRDVLETEDEEPPP-p F5H2X7;T675-p VPRDVLETEDEEPPP 0.783700445090728 0.112380248467204 -0.0503333333333333 0.239333333333333 2.03587479050757 12.5220560671701 -0.0503333333333334 0.239333333333333 0.625766804296187 0.0559492659874804 -0.516732192862688 2.4240180884266 F5H2X7 CIZ1 F5H2X7.T675.p_CIZ1 F5H2X7_T675t _1_1_675_675 F5H2X7 F5H2X7|Q9ULV3|Q5SYW2|Q9ULV3-2|Q9ULV3-4|Q9BTG3|Q9ULV3-3|Q9ULV3-5 Cip1-interacting zinc finger protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.9341.9341.3 18.06 15.68 99 1 1 1 0 664.3161 1910.9657 T675t TMT10 671 (R) DVLEtEDEEPPPRR (W) DVLET(1.0)EDEEPPPRR t:Phosphorylated T CIZ1 107380.6 2 11 497.1 292.98 HUMAN 1 -2.0359 12.5221 VPRELSLTPITGAKP-p M0QXA7;T654-p VPRELSLTPITGAKP 0.13016481000448 0.0158723558616884 -0.315 -0.491 18.3108922329308 24.8689516036549 -0.315 -0.491 0.0147540338903214 0.00325915368186653 -3.525459371461 -5.00445907586146 M0QXA7 WIZ M0QXA7.T654.p_WIZ M0QXA7_T654t _1_1_654_654 M0QXA7 M0QXA7|O95785-3|O95785-4|B9EGQ5|O95785-2 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28162.28162.3 20.8 20.8 2.091 7 1 1 0 1033.9138 3019.7647 T654t TMT10 650 (R) ELSLtPITGAKPSATGYLGSVAAK (R) ELS(0.0)LT(0.99)PIT(0.0)GAKPS(0.0)AT(0.0)GY(0.0)LGS(0.0)VAAK K:TMT10,t:Phosphorylated T WIZ 104190.1 2 17 195.1 461.51 HUMAN 1 -18.3109 -24.869 VPRERSDSGGSSSEP-p P48634;S761-p VPRERSDSGGSSSEP 0.0650613329930569 0.364555667490985 -0.39 -0.111333333333333 25.6703288087251 5.80875535439072 -0.39 -0.111333333333333 0.00270998644832099 0.262497072659246 -5.2155785632479 -1.25013041956928 P48634 PRRC2A P48634.S761.p_PRRC2A P48634_S761s _1_1_761_761 P48634 P48634|P48634-3|P48634-2|P48634-4 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.9525.9525.4 17.48 17.48 1.708 5 1 1 0 675.3121 2618.2579 S761s TMT10 757 (R) ERSDsGGSSSEPFDRHAPAMLR (E) ERS(0.0)DS(0.99)GGS(0.0)S(0.0)S(0.0)EPFDRHAPAMLR s:Phosphorylated S PRRC2A 229315.4 6 11 36.1 882.05 HUMAN 1 -25.6703 -5.8088 VPRGGFDSPFYRDSL-p Q92574;S505-p VPRGGFDSPFYRDSL 0.368041649069891 0.135810016596193 0.147666666666667 0.153 8.04871315390466 11.4266855751675 0.147666666666667 0.153 0.156721537861609 0.0719998252702527 1.64361001251489 2.22998659327469 Q92574 TSC1 Q92574.S505.p_TSC1 Q92574_S505s _1_1_505_505 Q92574 Q92574|Q92574-2 Hamartin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.18117.18117.3 16.58 11.83 5.829 4 1 1 0 732.3425 2115.0457 S505s TMT10 501 (R) GGFDsPFYRDSLPGSQR (K) GGFDS(0.99)PFY(0.0)RDS(0.0)LPGS(0.0)QR s:Phosphorylated S TSC1 130734.2 8 5 418.1 320.74 HUMAN 1 8.0487 11.4267 VPRVRRASSKGGGGY-p P15924;S165-p VPRVRRASSKGGGGY 0.885820345057877 0.0201520996919336 -0.0616666666666667 -1.03133333333333 1.03571386658896 23.2260261091167 -0.0616666666666667 -1.03133333333333 0.787822923315513 0.0047577036727429 -0.282813038096488 -4.60284323146651 P15924 DSP P15924.S165.p_DSP P15924_S165s _1_1_165_165 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13388.13388.3 16.67 14.82 1.123 7 1 1 0 987.7919 2881.3939 S165s Hydrogen 163 (R) RAsSKGGGGYTCQSGSGWDEFTK (H) RAS(0.99)S(0.0)KGGGGY(0.0)T(0.0)CQS(0.0)GS(0.0)GWDEFT(0.0)K K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S DSP 334221.3 9 3 104.1 590.4 HUMAN 1 -1.0357 -23.226 VPSGKIASPVSRKEP-p A6NMQ1;S215-p VPSGKIASPVSRKEP 0.284284135198705 0.00288859795277366 -0.159333333333333 -0.794 10.3061304565409 38.3908228316439 -0.159333333333333 -0.794 0.0931937857916969 0.000144849738945342 -2.03494959494701 -9.43061241588694 A6NMQ1 POLA1 A6NMQ1.S215.p_POLA1 A6NMQ1_S215s _1_1_215_215 A6NMQ1 A6NMQ1|P09884|A0A087WU64 DNA polymerase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21298.21298.3 13.46 13.46 2.558 3 1 1 0 899.539 2616.642 S215s TMT10 213 (K) IAsPVSRKEPPLTPVPLK (R) IAS(0.99)PVS(0.0)RKEPPLT(0.0)PVPLK K:TMT10,s:Phosphorylated S POLA1 168280.1 8 3 1873.1 109.8 HUMAN 1 -10.3061 -38.3908 VPSGRKGSGDYMPMS-p P35568;S629-p VPSGRKGSGDYMPMS 0.303423649713577 0.0148077240954323 -0.157 0.780333333333333 9.70403001510515 25.334865224744 -0.157 0.780333333333333 0.107052545515655 0.00292761172297212 -1.93033310866465 5.12258533493565 P35568 IRS1 P35568.S629.p_IRS1 P35568_S629s _1_1_629_629 P35568 P35568 Insulin receptor substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14884.14884.4 12.23 12.23 4.921 3 1 1 0 517.0172 1985.0803 S629s TMT10 627 (R) KGsGDYMPMSPK (S) KGS(0.99)GDY(0.0)MPMS(0.0)PK K:TMT10,s:Phosphorylated S IRS1 132786.8 4 10 229.1 423.14 HUMAN 1 -9.704 25.3349 VPSKEEPSPVKAEVA-p P46821;S614-p VPSKEEPSPVKAEVA 0.163805813837714 0.064686489407105 -0.541666666666667 0.278666666666667 15.7428101353963 15.8265816105841 -0.541666666666667 0.278666666666667 0.0266513361155287 0.0261421823060634 -3.01896143698216 3.03284822624028 P46821 MAP1B P46821.S614.p_MAP1B P46821_S614s _1_1_614_614 P46821 P46821 Microtubule-associated protein 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11043.11043.3 10.28 10.28 3.514 2 1 1 0 698.3879 2013.1835 S614s TMT10 606 (K) EVPSKEEPsPVK (A) EVPS(0.0)KEEPS(0.99)PVK K:TMT10,s:Phosphorylated S MAP1B 271827.6 1 4 210.1 442.48 HUMAN 1 -15.7428 15.8266 VPSKRKNSAPQLPLL-p Q8IY18;S35-p VPSKRKNSAPQLPLL 0.42081761725115 0.0405973069586793 0.109333333333333 0.258333333333333 6.93373967836811 18.6545207206216 0.109333333333333 0.258333333333333 0.202593744812728 0.0136316343410905 1.4494096373941 3.59288317550506 Q8IY18 SMC5 Q8IY18.S35.p_SMC5 Q8IY18_S35s _1_1_35_35 Q8IY18 Q8IY18 Structural maintenance of chromosomes protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.25388.25388.4 19.21 19.21 13.634 4 1 1 0 780.4372 3038.7515 S35s TMT10 32 (K) RKNsAPQLPLLQSSGPFVEGSIVR (I) RKNS(0.99)APQLPLLQS(0.0)S(0.0)GPFVEGS(0.0)IVR K:TMT10,s:Phosphorylated S SMC5 130059.4 3 2 2154.1 95.46 HUMAN 1 6.9337 18.6545 VPSMVQKSPRITPPA-p P35658-3;S667-p VPSMVQKSPRITPPA 0.74959744833606 0.233950577181969 0.0473333333333333 0.134 2.3813327375274 8.30711889667382 0.0473333333333333 0.134 0.577918671886256 0.147668583965997 0.591687577081484 1.68784316894973 P35658 NUP214 P35658.3.S667.p_NUP214 P35658-3_S667sT671tS679s_3_3_667_679 P35658-3 P35658-5|P35658-3|P35658-4|P35658-2|A0A0A0MSW3 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14275.14275.4 7.19 7.19 99 3 3 3 0 658.3422 2390.4487 S667s T671t S679s TMT10 667 (K) sPRItPPAAKPGsPQAK (S) S(1.0)PRIT(1.0)PPAAKPGS(1.0)PQAK K:TMT10,s:Phosphorylated S,t:Phosphorylated T NUP214 214428.5 3 39 111.1 572.27 HUMAN 1 2.3813 8.3071 VPSPLEGSEGDGDTD-p Q9Y606;S420-p VPSPLEGSEGDGDTD 0.204124866753728 0.421033578092006 0.267666666666667 0.148333333333333 13.3611860610359 4.99965819589786 0.267666666666667 0.148333333333333 0.0461191605634603 0.31625265516595 2.57635898945957 1.10377239327846 Q9Y606 PUS1 Q9Y606.S420.p_PUS1 Q9Y606_S420s _1_1_420_420 Q9Y606 Q9Y606|Q9Y606-2|F5H1S9|F5H168 tRNA pseudouridine synthase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19248.19248.2 10.74 10.74 1.293 3 1 1 0 892.377 1703.7809 S420s TMT10 413 (K) VPSPLEGsEGDGDTD (-) VPS(0.0)PLEGS(0.99)EGDGDT(0.0)D s:Phosphorylated S PUS1 48039.7 2 1 3709.1 44.75 HUMAN 1 13.3612 4.9997 VPSSLAYSLKKH___-p Q9NQS7;S914-p VPSSLAYSLKKH___ 0.714570848433642 0.0828309888200893 -0.0606666666666667 -0.215333333333333 2.75063410224763 14.3235557505156 -0.0606666666666667 -0.215333333333333 0.53080693681173 0.0369525509906942 -0.669291622674889 -2.75082321862206 Q9NQS7 INCENP Q9NQS7.S914.p_INCENP Q9NQS7_S914s _1_1_914_914 Q9NQS7 Q9NQS7 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21796.21796.2 7.63 4.12 2.179 4 1 1 0 801.95 1522.9245 S914s TMT10 907 (R) VPSSLAYsLK (K) VPS(0.0)S(0.0)LAY(0.0)S(0.99)LK K:TMT10,s:Phosphorylated S INCENP 105826.3 1 24 138.1 524.38 HUMAN 1 -2.7506 -14.3236 VPSSRRGSSTERPQL-p Q5H9F3-3;S1033-p VPSSRRGSSTERPQL 0.564703045643943 0.476930152373407 -0.100666666666667 -0.083 4.57233137894968 4.28839131779657 -0.100666666666667 -0.083 0.348952940327596 0.372529670446826 -1.02506801907336 -0.971696450388952 Q5H9F3 BCORL1 Q5H9F3.3.S1033.p_BCORL1 Q5H9F3-3_S1033s _1_1_1033_1033 Q5H9F3-3 Q5H9F3-3|Q5H9F3-2 Isoform 3 of BCL-6 corepressor-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8408.8408.3 10.86 6.52 1.107 4 1 1 0 751.3821 2172.1683 S1033s TMT10 1031 (R) RGsSTERPQLGSQVDLGR (V) RGS(0.99)S(0.0)T(0.0)ERPQLGS(0.0)QVDLGR s:Phosphorylated S BCORL1 192474.8 1 3 1277.1 159.01 HUMAN 1 -4.5723 -4.2884 VPSSRSNSFNTDRNI-p Q9UK61;S344-p VPSSRSNSFNTDRNI 0.0188125555564293 0.00119729192543449 -1.12733333333333 -1.36933333333333 40.53978987592 48.1121757377949 -1.12733333333333 -1.36933333333333 8.83122627381107e-05 1.54448048854448e-05 -10.4013049542388 -14.4593218689787 Q9UK61 FAM208A Q9UK61.S344.p_FAM208A Q9UK61_S344s _1_1_344_344 Q9UK61 Q9UK61|Q9UK61-4|Q9UK61-3 Protein TASOR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.8703.8703.3 12.21 12.21 1.139 3 1 1 0 650.3227 1868.9867 S344s TMT10 342 (R) SNsFNTDRNIDK (Y) S(0.0)NS(0.99)FNT(0.0)DRNIDK K:TMT10,s:Phosphorylated S FAM208A 190568.5 2 2 246.1 411.17 HUMAN 1 -40.5398 -48.1122 VPTAYRVSRSPGASR-p Q12872-2;S884-p VPTAYRVSRSPGASR 0.306187730404987 0.0240742085490205 0.639333333333333 -0.357333333333333 9.63325470366126 22.0567267322784 0.639333333333334 -0.357333333333333 0.108811432955822 0.00622769488287949 1.91805859999518 -4.33031891955858 Q12872 SFSWAP Q12872.2.S884.p_SFSWAP Q12872-2_S884sS886s_2_2_884_886 Q12872-2 Q12872-2 Isoform 2 of Splicing factor, suppressor of white-apricot homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7976.7976.4 7.79 7.79 2.23 6 2 2 0 520.7542 1920.0613 S884s S886s TMT10 876 (R) SVPTAYRVsRsPGASR (K) S(0.0)VPT(0.0)AY(0.0)RVS(0.99)RS(0.99)PGAS(0.0)R s:Phosphorylated S SFSWAP 110466.6 1 12 485.1 296.41 HUMAN 1 9.6333 -22.0567 VPTLERHYEELQARA-p O15020;Y834-p VPTLERHYEELQARA 0.84761259025746 0.428505945500755 -0.0393333333333333 0.079 1.39135855529645 4.89950074704253 -0.0393333333333334 0.0790000000000001 0.72587885327875 0.323630858502131 -0.369357147320852 1.08539286272183 O15020 SPTBN2 O15020.Y834.p_SPTBN2 O15020_Y834y _1_1_834_834 O15020 O15020|O15020-2 Spectrin beta chain, non-erythrocytic 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.13016.13016.3 17.87 11.28 4.616 2 1 1 0 684.0167 1970.0657 Y834y TMT10 827 (R) VPTLERHyEELQAR (A) VPT(0.0)LERHY(0.99)EELQAR y:Phosphorylated Y SPTBN2 272689.3 2 1 79.1 32.31 HUMAN 1 -1.3914 4.8995 VPTVDSVSQDPVSNM-p P50851;S1787-p VPTVDSVSQDPVSNM 0.960420214725763 0.871975919592808 -0.00766666666666668 -0.0173333333333333 0.336898501249332 0.838802277236183 -0.00766666666666668 -0.0173333333333333 0.925358779739784 0.824365431994249 -0.0981336853382731 -0.232917632327765 P50851 LRBA P50851.S1787.p_LRBA P50851_S1787s _1_1_1787_1787 P50851 P50851|P50851-2|E9PEM5 Lipopolysaccharide-responsive and beige-like anchor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27025.27025.3 20.2 20.2 1.116 7 1 1 0 923.1184 2687.3759 S1787s TMT10 1777 (K) LPSVPTVDSVsQDPVSNMSITER (L) LPS(0.0)VPT(0.0)VDS(0.0)VS(0.99)QDPVS(0.0)NMS(0.0)IT(0.0)ER s:Phosphorylated S LRBA 321783.7 12 24 74.1 649.16 HUMAN 1 -0.3369 -0.8388 VPVDHRPSLPRSCGP-p A0A1W2PR17;S22-p VPVDHRPSLPRSCGP 0.495901315517715 0.0405973069586793 -0.137 0.278 5.61005935558573 18.6539489617712 -0.137 0.278 0.274785659753602 0.0136334290957964 -1.21477337371268 3.59276551105541 A0A1W2PR17 NotFound A0A1W2PR17.S22.p_NotFound A0A1W2PR17_S22s _1_1_22_22 A0A1W2PR17 A0A1W2PR17 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18475.18475.3 16.25 9.88 99 1 1 1 0 627.6744 1801.0434 S22s TMT10 13 (K) IWVPVDHRPsLPR (S) IWVPVDHRPS(1.0)LPR s:Phosphorylated S PFKFB3 65177.2 1 1 2634.1 75.78 HUMAN 1 -5.6101 18.6539 VPVERRPSPGPRKRQ-p O75449;S109-p VPVERRPSPGPRKRQ 0.0745793811074775 0.808920823037043 0.606 -0.025 24.1488288024331 1.29007671593672 0.606 -0.025 0.00384695512053354 0.743006012953122 4.83138146222527 -0.345102269575213 O75449 KATNA1 O75449.S109.p_KATNA1 O75449_S109s _1_1_109_109 O75449 O75449|O75449-2 Katanin p60 ATPase-containing subunit A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3227.3227.3 8.25 2.27 99 1 1 1 0 359.192 995.5948 S109s TMT10 107 (R) RPsPGPR (K) RPS(1.0)PGPR s:Phosphorylated S KATNA1 56249.1 2 2 4042.1 38.71 HUMAN 1 24.1488 -1.2901 VPVKKAKSPTPSPSP-p A9Z1X7;S800-p VPVKKAKSPTPSPSP 0.153998790819573 0.00639800023666993 -0.239333333333333 -0.483333333333333 16.3295597805356 31.5612113428823 -0.239333333333333 -0.483333333333333 0.0232832725491425 0.000698037678851979 -3.13172770689567 -6.90984240031364 A9Z1X7 NotFound A9Z1X7.S800.p_NotFound A9Z1X7_S800s _1_1_800_800 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5883.5883.3 8.6 4.73 1.272 4 1 1 0 706.4081 2037.2424 S800s TMT10 797 (K) KAKsPTPSPSPPR (N) KAKS(0.99)PT(0.0)PS(0.0)PS(0.0)PPR K:TMT10,s:Phosphorylated S SRRM1 103445.7 2 49 8.1 1346.57 HUMAN 1 -16.3296 -31.5612 VPVNLLNSPDCDVKT-p P33981;S281-p VPVNLLNSPDCDVKT 0.414793760235967 0.0135075261562752 -0.130333333333333 -0.452 7.05063480947802 25.9886005387569 -0.130333333333333 -0.452 0.197213444759328 0.00251848834931172 -1.46987368984736 -5.29164813946754 P33981 TTK P33981.S281.p_TTK P33981_S281s _1_1_281_281 P33981 P33981|P33981-2 Dual specificity protein kinase TTK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.30876.30876.3 18.18 17.05 5.024 3 1 1 0 1206.272 3536.8406 S281s TMT10 274 (R) VPVNLLNsPDCDVKTDDSVVPCFMK (R) VPVNLLNS(0.99)PDCDVKT(0.0)DDS(0.0)VVPCFMK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TTK 98040.5 7 5 1204.1 166.9 HUMAN 1 -7.0506 -25.9886 VPVPGPGSGGNGPER-p Q6ZRV2;S647-p VPVPGPGSGGNGPER 0.93931869762336 0.779506401206205 -0.013 -0.039 0.530868392280787 1.49810463193213 -0.013 -0.0389999999999999 0.884938644487048 0.708254816788003 -0.151673900102728 -0.394501634930463 Q6ZRV2 FAM83H Q6ZRV2.S647.p_FAM83H Q6ZRV2_S647s _1_1_647_647 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22367.22367.5 23.11 23.11 8.95 2 1 1 0 793.4241 3883.1321 S647s TMT10 632 (R) VPAAFPTKVPVPGPGsGGNGPEREGPEEPGLAK (Q) VPAAFPT(0.0)KVPVPGPGS(0.99)GGNGPEREGPEEPGLAK K:TMT10,s:Phosphorylated S FAM83H 127633.5 37 10 7.1 1347.23 HUMAN 1 -0.5309 -1.4981 VPVSWLHS_______-p Q5T2T1;S576-p VPVSWLHS_______ 0.20055874973276 0.188411674756143 -0.338333333333333 0.165666666666667 13.5728248197988 9.53156077130866 -0.338333333333333 0.165666666666667 0.0439255813477148 0.111389414939688 -2.61481736850798 1.89970034908326 Q5T2T1 MPP7 Q5T2T1.S576.p_MPP7 Q5T2T1_S576s _1_1_576_576 Q5T2T1 Q5T2T1 MAGUK p55 subfamily member 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28341.28341.3 13.49 13.49 3.487 4 1 1 0 710.6808 2050.0595 S576s TMT10 562 (K) LETETHWVPVSWLHs (-) LET(0.0)ET(0.0)HWVPVS(0.0)WLHS(0.99) s:Phosphorylated S MPP7 65693.7 1 9 1298.1 156.56 HUMAN 1 -13.5728 9.5316 VPVTKQPTPPSEAAA-p Q86UP2;T153-p VPVTKQPTPPSEAAA 0.635259098172431 0.238189685023685 0.0856666666666667 0.149333333333333 3.67333230916308 8.2074229766791 0.0856666666666667 0.149333333333333 0.429206973078636 0.151097647376754 0.854147963319817 1.67058099089034 Q86UP2 KTN1 Q86UP2.T153.p_KTN1 Q86UP2_T153t _1_1_153_153 Q86UP2 Q86UP2|Q86UP2-4|Q86UP2-3|Q86UP2-2 Kinectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.14399.14399.4 19.57 19.57 2.807 4 1 1 0 790.208 3077.838 T153t TMT10 142 (K) KVEPVPVTKQPtPPSEAAASK (K) KVEPVPVT(0.0)KQPT(0.99)PPS(0.0)EAAAS(0.0)K K:TMT10,t:Phosphorylated T KTN1 156557.7 8 4 186.1 473.59 HUMAN 1 3.6733 8.2074 VPYPPPLSPAIEAIQ-p Q8N8N7;S270-p VPYPPPLSPAIEAIQ 0.588586350860677 0.85719485577436 -0.082 0.0233333333333334 4.23938688558965 0.943940554239298 -0.082 0.0233333333333334 0.376756983825308 0.804648015599753 -0.962620879696585 0.259731389927474 Q8N8N7 PTGR2 Q8N8N7.S270.p_PTGR2 Q8N8N7_S270s _1_1_270_270 Q8N8N7 Q8N8N7|G3V3Y1|G3V2R9 Prostaglandin reductase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.38858.38858.3 16.49 16.49 6.422 2 1 1 0 791.7672 2293.3208 S270s TMT10 262 (K) DVPYPPPLsPAIEAIQK (E) DVPY(0.0)PPPLS(0.99)PAIEAIQK K:TMT10,s:Phosphorylated S PTGR2 38954.7 3 1 5760.1 16.49 HUMAN 1 -4.2394 0.9439 VPYVVPLSPKLPKTK-p Q9UQR0;S511-p VPYVVPLSPKLPKTK 0.463694272097738 0.0200510267309114 -0.110666666666667 -0.321666666666667 6.15611865892878 23.2721272673602 -0.110666666666667 -0.321666666666667 0.242319371613675 0.00470746688108668 -1.31232751589098 -4.61380768592883 Q9UQR0 SCML2 Q9UQR0.S511.p_SCML2 Q9UQR0_S511s _1_1_511_511 Q9UQR0 Q9UQR0 Sex comb on midleg-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25241.25241.3 21.05 21.05 6.01 4 1 1 0 915.8687 2665.626 S511s TMT10 499 (R) SPQQTVPYVVPLsPKLPK (T) S(0.0)PQQT(0.0)VPY(0.0)VVPLS(0.99)PKLPK K:TMT10,s:Phosphorylated S SCML2 78111.2 15 3 1086.1 179.58 HUMAN 1 -6.1561 -23.2721 VQAAKLPSPAPARKP-p Q8IY33;S143-p VQAAKLPSPAPARKP 0.918784712427937 0.901272848642271 0.0163333333333333 0.0156666666666667 0.716537757874989 0.630145115658043 0.0163333333333333 0.0156666666666667 0.847903102206507 0.864939017120964 0.201181083354399 0.178328040469687 Q8IY33 MICALL2 Q8IY33.S143.p_MICALL2 Q8IY33_S143s _1_1_143_143 Q8IY33 Q8IY33|Q8IY33-2 MICAL-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12392.12392.4 17.92 17.92 99 1 1 1 0 593.1071 2289.4374 S143s TMT10 133 (K) KAPVQAAKLPsPAPAR (K) KAPVQAAKLPS(1.0)PAPAR K:TMT10,s:Phosphorylated S MICALL2 98299.3 9 13 387.1 332.82 HUMAN 1 0.7165 0.6301 VQAALSVSQENPEME-p Q8NBJ4;S309-p VQAALSVSQENPEME 0.362926296935609 0.333100933381518 0.145666666666667 0.0923333333333334 8.17762794034263 6.3274013895935 0.145666666666667 0.0923333333333334 0.152137825975178 0.232948469293503 1.66596101465294 1.34234878375446 Q8NBJ4 GOLM1 Q8NBJ4.S309.p_GOLM1 Q8NBJ4_S309s _1_1_309_309 Q8NBJ4 Q8NBJ4|Q8NBJ4-2 Golgi membrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23815.23815.3 22.95 22.95 1.178 3 1 1 0 1193.8962 3499.6961 S309s TMT10 289 (R) GFGGAGELGQTPQVQAALSVsQENPEMEGPER (D) GFGGAGELGQT(0.0)PQVQAALS(0.0)VS(0.99)QENPEMEGPER s:Phosphorylated S GOLM1 45503.6 10 4 1754.1 117.54 HUMAN 1 8.1776 6.3274 VQADREDSRE_____-p P02751-15;S2475-p VQADREDSRE_____ 0.132277812902063 0.0405412177736682 0.380333333333333 0.253333333333333 18.1299819736781 18.6644998640905 0.380333333333333 0.253333333333333 0.015381610247563 0.01360034776618 3.48861902737874 3.59493713368889 P02751 FN1 P02751.15.S2475.p_FN1 P02751-15_S2475s _1_1_2475_2475 P02751-15 P02751-15|P02751-7|P02751-11|P02751-3 Isoform 15 of Fibronectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25545.25545.3 9.94 9.94 9.935 3 1 1 0 1140.5042 3339.5241 S2475s TMT10 2452 (R) TNTNVNCPIECFMPLDVQADREDsRE (-) T(0.0)NT(0.0)NVNCPIECFMPLDVQADREDS(0.99)RE C:Carbamidomethylation,s:Phosphorylated S FN1 275909.8 2 1 5840.1 15.91 HUMAN 1 18.13 18.6645 VQAIIESTPELDMDK-p O60271;T348-p VQAIIESTPELDMDK 0.0986992178204749 0.00595004777315755 -0.375666666666667 -0.639333333333333 21.2759957500062 32.141962409478 -0.375666666666667 -0.639333333333334 0.0074541894284355 0.000610666026098679 -4.15830248223413 -7.09891247055445 O60271 SPAG9 O60271.T348.p_SPAG9 O60271_S347sT348t_2_2_347_348 O60271 O60271|A0A087X2D8|O60271-2|O60271-4 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.26072.26072.3 14.87 14.87 14.137 3 2 2 0 841.7305 2363.2416 S347s T348t TMT10 339 (K) SEVQAIIEstPELDMDK (D) S(0.0)EVQAIIES(0.99)T(0.99)PELDMDK K:TMT10,s:Phosphorylated S,t:Phosphorylated T SPAG9 147001.6 3 45 84.1 629.25 HUMAN 1 -21.276 -32.142 VQAMQISSEKEEDDN-p Q9UKY7;S107-p VQAMQISSEKEEDDN 0.200797395490016 0.00272422972588299 -0.744666666666667 0.676333333333333 13.5544018204181 38.9164982397133 -0.744666666666667 0.676333333333333 0.0441123117444026 0.000128336495571759 -2.61146353121531 9.65453745625119 Q9UKY7 CDV3 Q9UKY7.S107.p_CDV3 Q9UKY7_S107s _1_1_107_107 Q9UKY7 Q9UKY7|Q9UKY7-2 Protein CDV3 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13777.13777.2 16.64 18.74 1.209 2 1 1 0 1374.1713 2667.375 S107s TMT10 100 (R) VQAMQISsEKEEDDNEK (R) VQAMQIS(0.0)S(0.99)EKEEDDNEK K:TMT10,s:Phosphorylated S CDV3 27334.4 1 6 802.1 222.73 HUMAN 1 -13.5544 38.9165 VQASVRATPVTRVGS-p Q9UBU6;T216-p VQASVRATPVTRVGS 0.456945741797906 0.73797342733162 0.111333333333333 -0.0683333333333333 6.26720717040049 1.81976894490163 0.111333333333333 -0.0683333333333333 0.236199668066465 0.657692827263167 1.3320279569758 -0.468455377000928 Q9UBU6 FAM8A1 Q9UBU6.T216.p_FAM8A1 Q9UBU6_T216t _1_1_216_216 Q9UBU6 Q9UBU6 Protein FAM8A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.6974.6974.4 9.61 9.61 1.124 3 1 1 0 475.5094 1819.05 T216t TMT10 206 (R) APHVQASVRAtPVTR (V) APHVQAS(0.0)VRAT(0.99)PVT(0.0)R t:Phosphorylated T FAM8A1 44522 1 4 2499.1 81.16 HUMAN 1 6.2672 -1.8198 VQATVPATPEQPVLD-p P47985;T37-p VQATVPATPEQPVLD 0.971689010406699 0.0132337093750666 0.00566666666666666 0.411666666666667 0.241581387718265 26.1395557295508 0.00566666666666665 0.411666666666667 0.945892672663712 0.00243245282909882 0.0710728212390683 5.33124987396067 P47985 UQCRFS1 P47985.T37.p_UQCRFS1 P47985_T37t _1_1_37_37 P47985 P0C7P4|P47985 Cytochrome b-c1 complex subunit Rieske, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29756.29756.3 14.78 14.78 7.43 2 1 1 0 1060.2701 3098.8342 T37t TMT10 21 (R) GVAGALRPLVQATVPAtPEQPVLDLK (R) GVAGALRPLVQAT(0.0)VPAT(0.99)PEQPVLDLK K:TMT10,t:Phosphorylated T UQCRFS1 29952.7 3 2 3209.1 57.37 HUMAN 1 0.2416 26.1396 VQDMDEGSDDEEEGQ-p Q15459;S359-p VQDMDEGSDDEEEGQ 0.105885561453204 0.00159168462790637 -0.795 0.898 20.5449208028731 44.8798891014522 -0.795 0.898 0.00882079887433333 3.25095598704241e-05 -3.99688449927503 12.5601457310899 Q15459 SF3A1 Q15459.S359.p_SF3A1 Q15459_S359s _1_1_359_359 Q15459 Q15459|Q15459-2 Splicing factor 3A subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15836.15836.3 22.9 20.05 1.61 3 1 1 0 1263.207 3707.639 S359s TMT10 339 (K) AEEPPSQLDQDTQVQDMDEGsDDEEEGQK (V) AEEPPS(0.0)QLDQDT(0.0)QVQDMDEGS(0.99)DDEEEGQK K:TMT10,s:Phosphorylated S SF3A1 88941.6 1 3 1612.1 127.6 HUMAN 1 -20.5449 44.8799 VQEDAGKSPARNRSA-p Q9Y2I7;S299-p VQEDAGKSPARNRSA 0.99178117858217 0.0266672705593682 -0.00266666666666668 -0.362666666666667 0.0763289804797073 21.3653123661827 -0.00266666666666668 -0.362666666666667 0.982578149170393 0.00730245288112874 -0.0228640777886482 -4.17403120142263 Q9Y2I7 PIKFYVE Q9Y2I7.S299.p_PIKFYVE Q9Y2I7_S299s _1_1_299_299 Q9Y2I7 Q9Y2I7|Q9Y2I7-4|Q9Y2I7-3 1-phosphatidylinositol 3-phosphate 5-kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.12815.12815.3 13.18 10.27 4.516 2 1 1 0 665.6936 1915.1013 S299s TMT10 289 (R) LVSVQEDAGKsPAR (N) LVS(0.0)VQEDAGKS(0.99)PAR K:TMT10,s:Phosphorylated S PIKFYVE 239756.4 2 3 1398.1 146.55 HUMAN 1 -0.0763 -21.3653 VQEELLASPKKLLED-p Q96JM3;S603-p VQEELLASPKKLLED 0.274349481664046 0.00256376979859587 -0.270666666666667 -0.704 10.6325555473238 39.5778977124398 -0.270666666666667 -0.704 0.0864459089787521 0.000110207266031309 -2.09185389480639 -9.94311418125458 Q96JM3 CHAMP1 Q96JM3.S603.p_CHAMP1 Q96JM3_S603s _1_1_603_603 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31371.31371.5 26.48 26.48 99 1 1 1 0 919.2975 4512.4929 S603s TMT10 575 (K) AVELGDELQIDAIDDQKCDILVQEELLAsPKK (L) AVELGDELQIDAIDDQKCDILVQEELLAS(1.0)PKK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CHAMP1 90067.4 9 32 25.1 950.05 HUMAN 1 -10.6326 -39.5779 VQEESEGSDTDDNKD-p Q9UIG0;S708-p VQEESEGSDTDDNKD 0.223329192805893 0.0540855042709586 -0.305 0.369333333333333 12.5120106171847 16.8880436249065 -0.305 0.369333333333333 0.0560788292415308 0.0204736671042757 -2.42349432420605 3.2381692696587 Q9UIG0 BAZ1B Q9UIG0.S708.p_BAZ1B Q9UIG0_S705sS708s_2_2_705_708 Q9UIG0 Q9UIG0|Q9UIG0-2 Tyrosine-protein kinase BAZ1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5558.5558.3 11.52 11.52 2.767 4 2 2 0 843.686 2369.1105 S705s S708s TMT10 698 (R) RSDVQEEsEGsDTDDNK (D) RS(0.0)DVQEES(0.99)EGS(0.99)DT(0.0)DDNK K:TMT10,s:Phosphorylated S BAZ1B 172497.3 5 14 370.1 339.44 HUMAN 1 -12.512 16.888 VQEFTVKSEDAMTGD-p Q12955-4;S873-p VQEFTVKSEDAMTGD 0.808901767859381 0.0527555330802951 0.0376666666666667 0.228333333333333 1.7697533972482 17.045147983615 0.0376666666666667 0.228333333333333 0.665310933068763 0.019746275938415 0.457186202228622 3.26903313620004 Q12955 ANK3 Q12955.4.S873.p_ANK3 Q12955-4_S873s _1_1_873_873 Q12955-4 Q12955-4|D6RF31 Isoform 2 of Ankyrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17844.17844.4 8.36 8.36 1.266 4 1 1 0 692.8471 2688.4005 S873s TMT10 866 (K) VQEFTVKsEDAMTGDTDK (Y) VQEFT(0.0)VKS(0.99)EDAMT(0.0)GDT(0.0)DK K:TMT10,s:Phosphorylated S ANK3 205508.1 1 43 135.2 530.51 HUMAN 1 1.7698 17.0451 VQEKYADSPGASSPE-p P32519;S163-p VQEKYADSPGASSPE 0.819226860557372 0.685371429127045 -0.036 0.09 1.66847406680652 2.2464263599392 -0.036 0.0900000000000001 0.681008595231074 0.596152492412683 -0.434063821891005 0.562640446559747 P32519 ELF1 P32519.S163.p_ELF1 P32519_S163s _1_1_163_163 P32519 P32519|P32519-2 ETS-related transcription factor Elf-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9649.9649.3 14.49 14.49 2.089 4 1 1 0 657.9876 1891.9802 S163s TMT10 160 (K) YADsPGASSPEQPK (R) Y(0.0)ADS(0.99)PGAS(0.0)S(0.0)PEQPK K:TMT10,s:Phosphorylated S ELF1 67725 1 1 1950.1 105.53 HUMAN 1 -1.6685 2.2464 VQEVKLQSPLEPHSK-p O15211;S409-p VQEVKLQSPLEPHSK 0.421883877305009 0.012261563682622 -0.120333333333333 -0.723 6.90241385313191 26.6875685628148 -0.120333333333333 -0.723 0.204060344115905 0.00214409065382595 -1.44392022971466 -5.47683497802309 O15211 RGL2 O15211.S409.p_RGL2 O15211_S409s _1_1_409_409 O15211 O15211|O15211-2 Ral guanine nucleotide dissociation stimulator-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.22694.22694.4 20.9 17.85 9.719 2 1 1 0 711.1589 2761.6431 S409s TMT10 399 (R) ELLVQEVKLQsPLEPHSK (K) ELLVQEVKLQS(0.99)PLEPHS(0.0)K K:TMT10,s:Phosphorylated S RGL2 84061 4 2 1945.1 105.92 HUMAN 1 -6.9024 -26.6876 VQEVTQNSPAARTGV-p Q09666;S41-p VQEVTQNSPAARTGV 0.869175556772631 0.0719795906517435 -0.042 -0.381333333333333 1.18925750791607 15.1860337562993 -0.042 -0.381333333333333 0.760456277326121 0.0302967905385881 -0.320700378164503 -2.91148648977671 Q09666 AHNAK Q09666.S41.p_AHNAK Q09666_S41s _1_1_41_41 Q09666 Q09666|Q09666-2|E9PJC6 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26995.26995.5 22.81 17.58 1.669 5 1 1 0 860.8342 4220.1686 S41s TMT10 9 (R) ELLLPNWQGSGSHGLTIAQRDDGVFVQEVTQNsPAAR (T) ELLLPNWQGS(0.0)GS(0.0)HGLT(0.0)IAQRDDGVFVQEVT(0.0)QNS(0.99)PAAR s:Phosphorylated S AHNAK 629603.7 5 2 1.1 4313.36 HUMAN 1 -1.1893 -15.186 VQGAERASPEPQEWV-p P46379-4;S832-p VQGAERASPEPQEWV 0.177701975942063 0.148199313685908 0.272 0.189 14.8725034809152 10.9175710507356 0.272 0.189 0.0325648927283973 0.0809548541945661 2.85457312269327 2.14071785531623 P46379 BAG6 P46379.4.S832.p_BAG6 P46379-4_S832s _1_1_832_832 P46379-4 P46379-4 Isoform 4 of Large proline-rich protein BAG6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28607.28607.5 17.43 17.43 8.782 2 1 1 0 1035.1238 5091.625 S832s TMT10 811 (R) VGDPPQPLPEEPMEVQGAERAsPEPQEWVPIIQQDIQSQRK (V) VGDPPQPLPEEPMEVQGAERAS(0.99)PEPQEWVPIIQQDIQS(0.0)QRK K:TMT10,s:Phosphorylated S BAG6 97254.3 1 12 590.2 264.42 HUMAN 1 14.8725 10.9176 VQGAERASPEPQREN-p P46379-3;S994-p VQGAERASPEPQREN 0.36017676188563 0.559434898664891 0.128666666666667 0.057 8.24404533917191 3.40021596996113 0.128666666666667 0.057 0.149828856881268 0.457065459677437 1.67747154535003 0.800470474218198 P46379 BAG6 P46379.3.S994.p_BAG6 P46379-3_S994s _1_1_994_994 P46379-3 P46379-3|A0A0G2JK23|P46379-2|A0A024RCR6|P46379-5 Isoform 3 of Large proline-rich protein BAG6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15368.15368.5 27.72 24.14 2.884 5 1 1 0 1021.8871 5025.4268 S994s TMT10 972 (R) RVGDPPQPLPEEPMEVQGAERAsPEPQRENASPAPGTTAEEAMSR (G) RVGDPPQPLPEEPMEVQGAERAS(0.99)PEPQRENAS(0.0)PAPGT(0.0)T(0.0)AEEAMS(0.0)R s:Phosphorylated S BAG6 122796.4 24 5 590.1 264.42 HUMAN 1 8.244 3.4002 VQGKRKISPSKKESE-p P35251;S518-p VQGKRKISPSKKESE 0.92169646709418 0.823257572316718 -0.0396666666666667 -0.0266666666666667 0.694187756283471 1.18397277110599 -0.0396666666666667 -0.0266666666666666 0.852277894623192 0.761382206067436 -0.195305550787115 -0.319377759162686 P35251 RFC1 P35251.S518.p_RFC1 P35251_S518s _1_1_518_518 P35251 P35251|P35251-2|Q96QE3|A0A075B754 Replication factor C subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5051.5051.2 7.44 7.44 2.315 2 1 1 0 777.9838 1474.9924 S518s Hydrogen 516 (R) KIsPSKK (E) KIS(0.99)PS(0.0)KK K:TMT10-Lys-Only,s:Phosphorylated S RFC1 128765.8 5 13 316.1 367.51 HUMAN 1 -0.6942 -1.184 VQGPLNVSLSEEGKS-p P12270;S1185-p VQGPLNVSLSEEGKS 0.735131341504853 0.00303565851504412 0.0626666666666667 -0.712333333333333 2.53066930324772 37.8287227009014 0.0626666666666667 -0.712333333333333 0.558384133980925 0.000164864720218593 0.623360321517015 -9.19635754071983 P12270 TPR P12270.S1185.p_TPR P12270_S1185s _1_1_1185_1185 P12270 P12270 Nucleoprotein TPR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.30233.30385.4 24.59 22.67 3.113 3 1 1 0 848.4545 3310.8259 S1185s TMT10 1176 (K) EGVQGPLNVsLSEEGKSQEQILEILR (F) EGVQGPLNVS(0.99)LS(0.0)EEGKS(0.0)QEQILEILR K:TMT10,s:Phosphorylated S TPR 267687.4 10 9 385.1 333.55 HUMAN 1 2.5307 -37.8287 VQGPPGPTGKPGKRG-p P12107-2;T585-p VQGPPGPTGKPGKRG 0.51428507339171 0.197136134316172 -0.185666666666667 0.129 5.33156714362897 9.2784831094789 -0.185666666666667 0.129 0.292983582862263 0.118073296644819 -1.1644873082188 1.85589062192356 P12107 COL11A1 P12107.2.T585.p_COL11A1 P12107-2_T585t _1_1_585_585 P12107-2 P12107-2 Isoform B of Collagen alpha-1(XI) chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13128.13128.2 7.38 7.38 99 1 1 1 0 652.3351 1223.6946 T585t Hydrogen 577 (R) GVQGPPGPtGK (P) GVQGPPGPT(1.0)GK K:TMT10-Lys-Only,t:Phosphorylated T COL11A1 183046.5 1 1 7176.1 7.38 HUMAN 1 -5.3316 9.2785 VQGPSLESGDHGKIK-p Q09666;S298-p VQGPSLESGDHGKIK 0.362971528924294 0.110065239391534 -0.164666666666667 -0.195 8.17241451970588 12.6566045815611 -0.164666666666667 -0.195 0.152320567127226 0.0542424805391215 -1.66505736878223 -2.44806814775161 Q09666 AHNAK Q09666.S298.p_AHNAK Q09666_S298s _1_1_298_298 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12803.12803.3 13.31 13.31 1.208 2 1 1 0 716.6962 2068.1075 S298s TMT10 288 (R) AVEVQGPSLEsGDHGK (I) AVEVQGPS(0.0)LES(0.99)GDHGK K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 14 1.1 4313.36 HUMAN 1 -8.1724 -12.6566 VQGQLIKSPSKRQNV-p Q96I59;S101-p VQGQLIKSPSKRQNV 0.134150744259901 0.759941645542903 0.435333333333333 -0.033 17.9462354055294 1.64718265582681 0.435333333333333 -0.033 0.0160463573425787 0.684355456652498 3.45139255484359 -0.429121799360257 Q96I59 NARS2 Q96I59.S101.p_NARS2 Q96I59_S101s _1_1_101_101 Q96I59 Q96I59 Probable asparagine--tRNA ligase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20291.20291.4 15.38 15.38 2 4 1 1 0 768.4299 2990.7242 S101s TMT10 85 (R) ELNFGSSVEVQGQLIKsPSKR (Q) ELNFGS(0.0)S(0.0)VEVQGQLIKS(0.99)PS(0.0)KR K:TMT10,s:Phosphorylated S NARS2 54602.6 1 1 5916.1 15.38 HUMAN 1 17.9462 -1.6472 VQGQVPISPEPLQRP-p Q9H467;S110-p VQGQVPISPEPLQRP 0.100332547122081 0.08929954333299 -0.611 -0.203666666666667 21.1194165883865 13.8829641256129 -0.611 -0.203666666666667 0.00772784390491724 0.0408981428432126 -4.12341468516464 -2.66987017459219 Q9H467 CUEDC2 Q9H467.S110.p_CUEDC2 Q9H467_S110s _1_1_110_110 Q9H467 Q9H467 CUE domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.21838.21838.4 20.62 14.09 3.65 3 1 1 0 906.9775 3544.9198 S110s TMT10 94 (K) ENLQPQSSGVQGQVPIsPEPLQRPEMLK (E) ENLQPQS(0.0)S(0.0)GVQGQVPIS(0.99)PEPLQRPEMLK K:TMT10,s:Phosphorylated S CUEDC2 32065.8 4 1 3507.1 49.53 HUMAN 1 -21.1194 -13.883 VQHCPARTPQRGDEE-p Q9Y2K7;T844-p VQHCPARTPQRGDEE 0.210771684377891 0.88437642879925 -0.199666666666667 0.021 13.0531370286614 0.750413109293465 -0.199666666666667 0.021 0.049509244270689 0.84131511032178 -2.52064635453162 0.210024495096224 Q9Y2K7 KDM2A Q9Y2K7.T844.p_KDM2A Q9Y2K7_T844t _1_1_844_844 Q9Y2K7 Q9Y2K7|I3VM54|Q9Y2K7-2|Q9Y2K7-5|Q9Y2K7-4 Lysine-specific demethylase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11166.11166.5 21.92 21.92 18.752 2 1 1 0 1013.4364 4983.178 T844t TMT10 835 (R) VLVQHCPARtPQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAAR (L) VLVQHCPART(0.99)PQRGDEEGLGGEEEEEEEEEEEDDS(0.0)AEEGGAAR C:Carbamidomethylation,t:Phosphorylated T KDM2A 135243.8 1 13 409.1 323.7 HUMAN 1 -13.0531 0.7504 VQHQGRLSLDLSHRT-p Q8TDM6;S1232-p VQHQGRLSLDLSHRT 0.578719648137346 0.609175463576491 0.0756666666666666 0.0633333333333334 4.36935492875108 2.92473258043905 0.0756666666666667 0.0633333333333334 0.365649098590108 0.509948997038625 0.987105899371 0.704985201231715 Q8TDM6 DLG5 Q8TDM6.S1232.p_DLG5 Q8TDM6_S1232s _1_1_1232_1232 Q8TDM6 Q8TDM6|Q8TDM6-4|Q8TDM6-2 Disks large homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11173.11173.5 17.14 17.14 2.439 3 1 1 0 583.6979 2834.4971 S1232s TMT10 1215 (R) DAGPQGLHPSVQHQGRLsLDLSHR (T) DAGPQGLHPS(0.0)VQHQGRLS(0.99)LDLS(0.0)HR s:Phosphorylated S DLG5 215575.4 3 30 34.1 890.58 HUMAN 1 4.3694 2.9247 VQHQRIHTGEKPYTC-p Q99676;T329-p VQHQRIHTGEKPYTC 0.988265143996636 0.0056789179374621 0.00299999999999999 -0.914333333333333 0.105448406043542 32.5429481829332 0.003 -0.914333333333333 0.976012004664436 0.000556807634968609 0.0314842623826464 -7.23195496744306 Q99676 ZNF184 Q99676.T329.p_ZNF184 Q99676_T329t _1_1_329_329 Q99676 Q99676 Zinc finger protein 184 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8882.8882.4 7.91 7.91 1.315 3 1 1 0 641.0679 2481.2833 T329t TMT10 327 (R) IHtGEKPYTCNECGK (A) IHT(0.99)GEKPY(0.0)T(0.0)CNECGK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T ZNF184 88626 1 128 240.33 415.72 HUMAN 1 0.1054 -32.5429 VQHQRTHTGEKPYKC-p Q9UEG4;T201-p VQHQRTHTGEKPYKC 0.275945181439664 0.00176923659520671 -0.225666666666667 -0.955 10.5767029957795 43.5109150986177 -0.225666666666667 -0.955 0.0875648282980559 4.45562354399024e-05 -2.08210628445288 -11.8291064253854 Q9UEG4 ZNF629 Q9UEG4.T201.p_ZNF629 Q9UEG4_T201t _1_1_201_201 Q9UEG4 O75362|P17040|P17040-3|P17040-2|Q9UEG4|P51814-6|Q9P0L1|Q9HBT7|Q99676|Q86WZ6-2|Q9P2J8|P51814-5|P51814-3|P51814-2|P51814-7|P51814-8|Q8N8J6-2|A0A087X254|Q9P2J8-2|Q8N8J6-3|H9KV89|Q6ZMW2|P51814-4|O14978|Q8N7K0|Q9Y2A4|Q86YE8|P15621|Q2M218|O95125|Q8N184|A0A087WT67|A6NHJ4|O14628|Q9H7R0|P17025-2|Q8N7K0-2|P15621-3|Q2M218-2|A0A087WXA8|P17017|Q32M78|Q8N972|Q96RE9-3|Q96RE9-2|Q96MX3|Q8N184-1|P15621-2|Q86XU0|Q9NPC7-2|Q8NDW4|Q86YE8-4|Q86YE8-2|F8W7T7|Q7Z7L9|A0A0C4DFQ3|O14628-6|P16415|Q86YE8-3|O14628-5|A0A0A0MS50|F8WEL6|P36508|Q96RE9-4|Q9UC07|O14628-7|Q9H7R0-2|O14628-4|Q14584|Q6ZMS4|B2ZWH0|C9JN71|Q7Z3I7|A0A087WUV0|P0CG31|Q9HBT8|P36508-2|Q9HBT8-2|B9EG95|Q9NPC7-3|O75346|O95780|Q15937|A0A087WVT1|A6NP11|Q13360|Q96H40|Q13887|Q9UC06|A0A0M3HEQ9|Q8N8L2|Q8IZC7|F5H032|O95780-3|Q96BR6|F8W6Y9|Q8N859|P16415-2|O95125-2|O75346-2|O95780-2|Q9Y4X4|Q9UJN7|Q15973|Q9H4T2|P57682|Q96N95|B4DI05|Q6U7Q0|Q96BR6-2|Q13887-4|A0A087X2B0|Q15973-4|O75840-4|O75840-2|P52743|Q6ZT77|Q15973-2 Zinc finger protein 629 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.5797.5797.4 12.26 12.26 3.091 3 1 1 0 457.755 1748.031 T201t TMT10 199 (R) THtGEKPYK (C) T(0.0)HT(0.99)GEKPY(0.0)K K:TMT10,t:Phosphorylated T ZNF629 98957.8 4 152 240.4 415.72 HUMAN 1 -10.5767 -43.5109 VQHQRVHTGEKPYKC-p P17028;T302-p VQHQRVHTGEKPYKC 0.338303322331957 0.00159168462790637 -0.191 -1.17033333333333 8.75755630609809 44.797297096195 -0.191 -1.17033333333333 0.133120325047687 3.31337270576629e-05 -1.76639560155981 -12.5148638209781 P17028 ZNF24 P17028.T302.p_ZNF24 P17028_T302t _1_1_302_302 P17028 P17040|P17040-3|P59923|Q9UJW7|Q9UJW7-2|Q9UJU3|Q9UJU3-2|Q8NHY6|B7Z6K7|Q9Y2L8|A0A087WVZ7|Q9HCG1|Q6ZN19|Q9NYT6|Q86WZ6|M0QZI7|Q08AN1|Q86WZ6-2|Q14586|Q14590|Q14590-2|P17035|A0A1W2PQ69|Q9NZL3|P52740|Q9UK10|Q14588|Q8N8Z8|P17020|Q02386|Q9H7R5-2|Q76KX8|A6NK53|Q08AG5|P17035-2|Q86YE8|Q76KX8-2|Q0VGE8|Q8N8Z8-2|P35789|Q86YE8-3|Q9UL59|Q09FC8|K7ENM7|K7EIK6|P35789-2|Q96NJ3|P52740-2|P0C7X5|Q9P2F9|Q86YE8-4|Q86YE8-2|A0A087WWD1|Q3KP31|Q14593|Q09FC8-6|P17022|P17022-2|Q3KP31-2|Q09FC8-2|Q09FC8-5|Q09FC8-4|Q8N8E2|P35789-3|Q9NV72|Q7L2R6|Q5VIY5|Q14593-2|P0CJ79|Q9UK12-2|Q9UK11|Q8N8E2-2|Q5VIY5-2|Q9NV72-2|Q96NJ3-2|B4DX44|Q6U7Q0|A0A1W2PPT3|P17028|A0A1W2PNY2|Q6AZW8|Q09FC8-3|Q8N3J9|Q8N8E2-3 Zinc finger protein 24 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.7246.7246.4 12.44 12.44 9.538 2 1 1 0 457.2604 1746.0517 T302t TMT10 300 (R) VHtGEKPYK (C) VHT(0.99)GEKPY(0.0)K K:TMT10,t:Phosphorylated T ZNF24 42782.2 2 7 2565.1 78.32 HUMAN 1 -8.7576 -44.7973 VQIAAAPTPEKEMML-p Q8NG31;T539-p VQIAAAPTPEKEMML 0.25414491835742 0.0896385669641677 -0.182333333333333 -0.295666666666667 11.3247570684422 13.8625629099905 -0.182333333333333 -0.295666666666667 0.0737096405189422 0.0410907160144121 -2.21310489043413 -2.66613897710059 Q8NG31 CASC5 Q8NG31.T539.p_CASC5 Q8NG31_T539t _1_1_539_539 Q8NG31 Q8NG31|Q8NG31-2 Kinetochore scaffold 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13064.13064.3 19.11 19.44 19.106 2 1 1 0 745.7204 2155.1759 T539t TMT10 527 (K) QDQSNVQIAAAPtPEK (E) QDQS(0.0)NVQIAAAPT(0.99)PEK K:TMT10,t:Phosphorylated T KNL1 268353.4 3 4 650.1 254.2 HUMAN 1 -11.3248 -13.8626 VQKAFSESGSNLHAL-p Q6P4F7;S606-p VQKAFSESGSNLHAL 0.588938726682811 0.629016847859228 0.133333333333333 0.14 4.23396532906891 2.73701119677141 0.133333333333333 0.14 0.377227605685274 0.532474580810877 0.961596344653296 0.66638174393978 Q6P4F7 ARHGAP11A Q6P4F7.S606.p_ARHGAP11A Q6P4F7_S604sS606sS608s_3_3_604_608 Q6P4F7 Q6P4F7|Q6P4F7-3 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.40262.40857.4 7 7 3.08 6 3 3 0 901.92 3347.7894 S604s S606s S608s N609n M614m Hydrogen 602 (K) AFsEsGsnLHALmNQRQSSVTNVGKVK (L) AFS(0.99)ES(0.99)GS(0.99)N(0.99)LHALM(1.0)N(0.0)QRQS(0.0)S(0.0)VT(0.0)N(0.0)VGKVK K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated,m:Oxidized methionine ARHGAP11A 114948.2 1 24 414.1 321.53 HUMAN 1 4.234 2.737 VQKAKTPTPEPFDSE-p Q9NSY0;T411-p VQKAKTPTPEPFDSE 0.775630432221147 0.134409105050787 -0.0456666666666667 -0.167666666666667 2.11399707426407 11.4874272796703 -0.0456666666666667 -0.167666666666667 0.61461094876778 0.0709998239797597 -0.533902080361053 -2.24067187311014 Q9NSY0 NRBP2 Q9NSY0.T411.p_NRBP2 Q9NSY0_T411t _1_1_411_411 Q9NSY0 Q9NSY0|Q9NSY0-4|Q9NSY0-2 Nuclear receptor-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11403.11403.3 11.35 8.6 1.499 4 1 1 0 705.3586 2034.0908 T411t TMT10 407 (K) AKTPtPEPFDSETR (K) AKT(0.0)PT(0.99)PEPFDS(0.0)ET(0.0)R K:TMT10,t:Phosphorylated T NRBP2 58315.5 4 4 2343.1 87.17 HUMAN 1 -2.114 -11.4874 VQKDKLCSPLSEPGD-p Q5VUA4;S2189-p VQKDKLCSPLSEPGD 0.491254403752362 0.957517972558504 -0.0986666666666667 -0.00566666666666663 5.68449156304367 0.271186401736527 -0.0986666666666667 -0.00566666666666663 0.27011633202329 0.939466632861929 -1.228147757632 -0.0795264408060454 Q5VUA4 ZNF318 Q5VUA4.S2189.p_ZNF318 Q5VUA4_S2189sS2192s_2_2_2189_2192 Q5VUA4 Q5VUA4 Zinc finger protein 318 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19129.19129.3 12.67 12.67 12.671 3 2 2 0 668.9782 1844.9828 S2189s S2192s TMT10 2187 (K) LCsPLsEPGDPSK (C) LCS(0.99)PLS(0.99)EPGDPS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF318 252762.4 5 49 37.1 870.88 HUMAN 1 -5.6845 -0.2712 VQKSPRITPPAAKPG-p P35658-3;T671-p VQKSPRITPPAAKPG 0.657664226760099 0.523365873549707 -0.0613333333333333 0.0686666666666667 3.41259182221776 3.77838106031554 -0.0613333333333334 0.0686666666666667 0.455764839275708 0.418949709839303 -0.803037734236711 0.874380438817991 P35658 NUP214 P35658.3.T671.p_NUP214 P35658-3_T671t _1_1_671_671 P35658-3 P35658-5|P35658-3|P35658-4|P35658-2|A0A0A0MSW3 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10971.10971.5 13.81 12.99 1.341 3 1 1 0 494.8896 2390.4487 T671t TMT10 667 (K) SPRItPPAAKPGSPQAK (S) S(0.0)PRIT(0.99)PPAAKPGS(0.0)PQAK K:TMT10,t:Phosphorylated T NUP214 214428.5 4 12 111.1 572.27 HUMAN 1 -3.4126 3.7784 VQLIRSWSLATFRTL-p Q15149;S1047-p VQLIRSWSLATFRTL 0.251375762983944 0.229911516064304 -0.181333333333333 -0.118666666666667 11.4407909420604 8.4109053929625 -0.181333333333333 -0.118666666666667 0.0717663577660137 0.144181473867951 -2.23352059887333 -1.70580746102887 Q15149 PLEC Q15149.S1047.p_PLEC Q15149_S1047s _1_1_1047_1047 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.23425.23425.2 13.78 7.61 2.197 3 1 1 0 638.8182 1196.6625 S1047s TMT10 1045 (R) SWsLATFR (T) S(0.0)WS(0.99)LAT(0.0)FR s:Phosphorylated S PLEC 533778 2 11 44.1 794.85 HUMAN 1 -11.4408 -8.4109 VQLLRAVSLGQVVIT-p F5GX28;S954-p VQLLRAVSLGQVVIT 0.993552014415478 0.0226595392723266 0.00133333333333333 0.386666666666667 0.0601988621197531 22.4596027881597 0.00133333333333333 0.386666666666667 0.98623432522808 0.00567596516210136 0.018065087111674 4.42302383257327 F5GX28 KDM4B F5GX28.S954.p_KDM4B F5GX28_S954s _1_1_954_954 F5GX28 F5GX28|O94953|A0A0C4DFL8 Lysine-specific demethylase 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24814.24814.3 8.39 8.39 8.385 2 1 1 0 551.6635 1573.0089 S954s TMT10 952 (R) AVsLGQVVITK (N) AVS(0.99)LGQVVIT(0.0)K K:TMT10,s:Phosphorylated S KDM4B 127963.8 1 5 1830.1 112.42 HUMAN 1 0.0602 22.4596 VQLPPGDYSTTPGGT-p Q13541;Y34-p VQLPPGDYSTTPGGT 0.43497101841619 0.19648380456525 -0.105666666666667 -0.128666666666667 6.66069917688693 9.2952926413093 -0.105666666666667 -0.128666666666667 0.215739705876055 0.117617172785657 -1.40147965006559 -1.85879950807552 Q13541 EIF4EBP1 Q13541.Y34.p_EIF4EBP1 Q13541_Y34yS35s_2_2_34_35 Q13541 Q13541 Eukaryotic translation initiation factor 4E-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28560.28784.4 10.71 9.32 1.128 10 2 2 0 1114.3145 4294.3124 Y34y S35s TMT10 21 (R) VVLGDGVQLPPGDysTTPGGTLFSTTPGGTRIIYDRK (F) VVLGDGVQLPPGDY(0.99)S(0.99)T(0.0)T(0.0)PGGT(0.0)LFS(0.0)T(0.0)T(0.0)PGGT(0.0)RIIY(0.0)DRK K:TMT10,y:Phosphorylated Y,s:Phosphorylated S EIF4EBP1 12693.9 209 8 227.1 424.6 HUMAN 1 -6.6607 -9.2953 VQLVGGLSPLSSPSD-p Q9UKV3;S478-p VQLVGGLSPLSSPSD 0.572719143373661 0.00926447542666619 -0.113666666666667 0.463666666666667 4.45518799171926 28.7157371216576 -0.113666666666667 0.463666666666667 0.358493429945631 0.00134408361796807 -1.00319902417994 6.04166165212699 Q9UKV3 ACIN1 Q9UKV3.S478.p_ACIN1 Q9UKV3_S478s _1_1_478_478 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29866.29866.5 22.78 17.5 2.864 9 1 1 0 1124.8254 5540.1285 S478s TMT10 463 (R) ELLVSQHTVQLVGGLsPLSSPSDTKAESPAEKVPEESVLPLVQK (S) ELLVS(0.0)QHT(0.0)VQLVGGLS(0.99)PLS(0.0)S(0.0)PS(0.0)DT(0.0)KAES(0.0)PAEKVPEES(0.0)VLPLVQK K:TMT10,s:Phosphorylated S ACIN1 152258.2 8 13 32.2 899.18 HUMAN 1 -4.4552 28.7157 VQMNRNLSNEELTKS-p Q0JRZ9;S403-p VQMNRNLSNEELTKS 0.983436641652802 0.222940673075465 -0.00733333333333337 -0.357333333333333 0.143776867928062 8.58544763049724 -0.00733333333333332 -0.357333333333333 0.967436153683168 0.138501742380895 -0.042747127442574 -1.73600799963335 Q0JRZ9 FCHO2 Q0JRZ9.S403.p_FCHO2 Q0JRZ9_S403s _1_1_403_403 Q0JRZ9 Q0JRZ9|Q0JRZ9-3 F-BAR domain only protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13626.13626.2 14.16 6.68 5.51 2 1 1 0 793.4167 1505.8575 S403s TMT10 401 (R) NLsNEELTK (S) NLS(0.99)NEELT(0.0)K K:TMT10,s:Phosphorylated S FCHO2 89436.3 5 5 864.1 210.2 HUMAN 1 -0.1438 -8.5854 VQNKRRRSVTPPEEQ-p P30305;S353-p VQNKRRRSVTPPEEQ 0.456411337786712 0.0146076759554989 -0.103333333333333 -0.427 6.27836722457296 25.4197486288756 -0.103333333333333 -0.427 0.235593485571079 0.00287094674859081 -1.33400465547735 -5.14431608856383 P30305 CDC25B P30305.S353.p_CDC25B P30305_S353s _1_1_353_353 P30305 P30305-4|P30305-2|P30305-3|B4DIG0|G8JLH2 M-phase inducer phosphatase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.11749.11749.3 14.12 14.12 1.14 2 1 1 0 746.0328 2156.1123 S353s TMT10 353 (R) sVTPPEEQQEAEEPK (A) S(0.99)VT(0.0)PPEEQQEAEEPK K:TMT10,s:Phosphorylated S CDC25B 65671 2 11 563.1 271.52 HUMAN 1 -6.2784 -25.4197 VQPDDPISFMQLTAK-p P53618;S672-p VQPDDPISFMQLTAK 0.261288279839724 0.574155231150706 0.266 0.111666666666667 11.0453168826812 3.24865744022814 0.266 0.111666666666667 0.0786082832573737 0.473297549570651 2.16405038243655 0.770366974577595 P53618 COPB1 P53618.S672.p_COPB1 P53618_S672s _1_1_672_672 P53618 P53618 Coatomer subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.31288.31288.3 10.07 10.07 4.49 3 1 1 0 848.1065 2462.3365 S672s TMT10 662 (R) NVTVQPDDPIsFMQLTAK (N) NVT(0.0)VQPDDPIS(0.99)FMQLT(0.0)AK K:TMT10,s:Phosphorylated S COPB1 108281.4 1 2 3508.1 49.52 HUMAN 1 11.0453 3.2487 VQPDKPASPKFIVTL-p Q6PJT7;S515-p VQPDKPASPKFIVTL 0.744690566487893 0.0596176218583099 -0.0586666666666667 0.239 2.42778082363917 16.3158024528398 -0.0586666666666667 0.239 0.571770727869757 0.023357144886544 -0.601583187594713 3.12680127461619 Q6PJT7 ZC3H14 Q6PJT7.S515.p_ZC3H14 Q6PJT7_S515s _1_1_515_515 Q6PJT7 Q6PJT7|Q6PJT7-2|Q6PJT7-9|Q6PJT7-5|G3V411 Zinc finger CCCH domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.12779.12779.2 16.32 12.04 99 1 1 1 0 1031.5809 1982.1889 S515s TMT10 506 (R) DLVQPDKPAsPK (F) DLVQPDKPAS(1.0)PK K:TMT10,s:Phosphorylated S ZC3H14 83844.1 11 14 420.1 320.31 HUMAN 1 -2.4278 16.3158 VQPNEAVYTKMMTKK-p P11413-2;Y447-p VQPNEAVYTKMMTKK 0.929628181962969 0.194050077685965 0.0146666666666667 0.149 0.628923137455988 9.36333300424249 0.0146666666666667 0.149 0.865182420014305 0.115788839063688 0.178019406177517 1.87057514879482 P11413 G6PD P11413.2.Y447.p_G6PD P11413-2_Y447y _1_1_447_447 P11413-2 P11413-2|P11413-3 Isoform Long of Glucose-6-phosphate 1-dehydrogenase GG20160819_MSz_CCLE_T4D7_pY_Injection_01.13560.13610.2 15 8.95 1.693 2 1 1 0 843.9467 1606.9205 Y447y TMT10 440 (R) VQPNEAVyTK (M) VQPNEAVY(0.99)T(0.0)K K:TMT10,y:Phosphorylated Y G6PD 64339.1 2 1 53.1 42.61 HUMAN 1 0.6289 9.3633 VQPPRSISPSALQDL-p Q92793;S2063-p VQPPRSISPSALQDL 0.14415361707016 0.0907547112187168 0.243666666666667 0.244 17.1760044424465 13.7864044110523 0.243666666666667 0.244 0.0191601787215149 0.0418176437893226 3.2973811628916 2.65222342053338 Q92793 CREBBP Q92793.S2063.p_CREBBP Q92793_S2063s _1_1_2063_2063 Q92793 Q92793|Q92793-2 CREB-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31272.31272.2 12.6 12.6 1.508 3 1 1 0 804.9309 1528.8896 S2063s TMT10 2061 (R) SIsPSALQDLLR (T) S(0.0)IS(0.99)PS(0.0)ALQDLLR s:Phosphorylated S CREBBP 268199.1 4 23 591.1 264.37 HUMAN 1 17.176 13.7864 VQPQVANSPSSAAQK-p Q8NDI1;S964-p VQPQVANSPSSAAQK 0.564674292468972 0.0176721835500678 -0.108666666666667 -0.576 4.5732394008306 24.1452879776518 -0.108666666666667 -0.576 0.34887998895553 0.00385009284134192 -1.02523711925322 -4.82475569852885 Q8NDI1 EHBP1 Q8NDI1.S964.p_EHBP1 Q8NDI1_S964s _1_1_964_964 Q8NDI1 Q8NDI1|Q8NDI1-2|Q8NDI1-3 EH domain-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.21088.21088.3 16.11 16.11 3.503 3 1 1 0 802.4338 2325.3178 S964s TMT10 954 (K) LLEVQPQVANsPSSAAQK (A) LLEVQPQVANS(0.99)PS(0.0)S(0.0)AAQK K:TMT10,s:Phosphorylated S EHBP1 140642.4 1 13 285.1 385.52 HUMAN 1 -4.5732 -24.1453 VQPRTPASPHFRSQG-p P29590-2;S583-p VQPRTPASPHFRSQG 0.78149643092872 0.156346448944507 0.0656666666666667 -0.175333333333333 2.05613192879199 10.5983466569873 0.0656666666666667 -0.175333333333333 0.62285478774395 0.0871295225692246 0.521197283363422 -2.08498239208646 P29590 PML P29590.2.S583.p_PML P29590-2_S583s _1_1_583_583 P29590-2 P29590-2 Isoform PML-5 of Protein PML HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6501.6501.3 15.41 15.41 3.401 2 1 1 0 407.871 1141.6316 S583s TMT10 580 (R) TPAsPHFR (S) T(0.0)PAS(0.99)PHFR s:Phosphorylated S PML 68953.3 2 3 777.2 226.8 HUMAN 1 2.0561 -10.5983 VQPVSLPSPTSTDGD-p Q96BD5-3;S479-p VQPVSLPSPTSTDGD 0.701353260280796 0.0802529084845163 -0.082 0.332333333333333 2.89908342423666 14.5372685372313 -0.082 0.332333333333333 0.512969634485501 0.0351781621394334 -0.699839395780647 2.79035526739792 Q96BD5 PHF21A Q96BD5.3.S479.p_PHF21A Q96BD5-3_S479s _1_1_479_479 Q96BD5-3 Q96BD5-3 Isoform 3 of PHD finger protein 21A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27783.27783.5 18.17 18.17 1.92 10 1 1 0 913.2391 4482.1998 S479s TMT10 462 (K) TETTFTFPAPVQPVSLPsPTSTDGDIHEDFCSVCRK (S) T(0.0)ET(0.0)T(0.0)FT(0.0)FPAPVQPVS(0.0)LPS(0.99)PT(0.0)S(0.0)T(0.0)DGDIHEDFCS(0.0)VCRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PHF21A 75608.5 2 2 3097.1 60.75 HUMAN 1 -2.8991 14.5373 VQQAQRRSAVFLSFK-p Q96JM7;S670-p VQQAQRRSAVFLSFK 0.813016718966535 0.00468189972343549 -0.0333333333333333 -0.605333333333333 1.72864296172659 34.069015190442 -0.0333333333333334 -0.605333333333333 0.67163868681935 0.000391830718874226 -0.447832700248442 -7.75769543573483 Q96JM7 L3MBTL3 Q96JM7.S670.p_L3MBTL3 Q96JM7_S670s _1_1_670_670 Q96JM7 Q96JM7|Q96JM7-2 Lethal(3)malignant brain tumor-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.27216.27216.2 14.12 14.12 4.975 2 1 1 0 718.9031 1356.8291 S670s TMT10 670 (R) sAVFLSFK (S) S(0.99)AVFLS(0.0)FK K:TMT10,s:Phosphorylated S L3MBTL3 89704.4 4 5 1586.1 129.42 HUMAN 1 -1.7286 -34.069 VQQHGGVSLVEQLLQ-p P12081;S278-p VQQHGGVSLVEQLLQ 0.797447525031717 0.00355720499747199 -0.0643333333333334 0.595666666666667 1.89713352956256 36.529568709687 -0.0643333333333334 0.595666666666667 0.646080520352183 0.000222353069466184 -0.485899062522491 8.67472365971147 P12081 HARS P12081.S278.p_HARS P12081_S278s _1_1_278_278 P12081 P12081 Histidine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.34860.34860.4 7.89 7.89 5.301 2 1 1 0 741.1439 2881.5824 S278s TMT10 267 (R) IGDYVQQHGGVsLVEQLLQDPK (L) IGDY(0.0)VQQHGGVS(0.99)LVEQLLQDPK K:TMT10,s:Phosphorylated S HARS 57980 1 6 2178.1 94.48 HUMAN 1 -1.8971 36.5296 VQQKVNFSEEGETEE-p Q5JTV8;S215-p VQQKVNFSEEGETEE 0.71190346828342 0.0233997153972448 0.0566666666666667 -0.407 2.77656120107292 22.2481146384917 0.0566666666666667 -0.407 0.527647494052276 0.00595920788832245 0.674652108831528 -4.37420557918379 Q5JTV8 TOR1AIP1 Q5JTV8.S215.p_TOR1AIP1 Q5JTV8_S215s _1_1_215_215 Q5JTV8 J3KN66|Q5JTV8-3|A0A0A0MSK5|Q5JTV8-2 Torsin-1A-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14695.14695.4 20.81 20.81 3.003 8 1 1 0 824.37 3214.4912 S215s TMT10 212 (K) VNFsEEGETEEDDQDSSHSSVTTVK (A) VNFS(0.99)EEGET(0.0)EEDDQDS(0.0)S(0.0)HS(0.0)S(0.0)VT(0.0)T(0.0)VK K:TMT10,s:Phosphorylated S TOR1AIP1 66418.4 2 10 585.1 265.22 HUMAN 1 2.7766 -22.2481 VQQNMMNSASGPLPD-p P46937-9;S227-p VQQNMMNSASGPLPD 0.313268519533153 0.201006693012456 -0.146333333333333 -0.132333333333333 9.42839268245348 9.16606679311228 -0.146333333333333 -0.132333333333333 0.114067187044664 0.121169501364411 -1.88254955371756 -1.83643974891576 P46937 YAP1 P46937.9.S227.p_YAP1 P46937-9_S227s_1_1_227_227 P46937-9 P46937|P46937-8|P46937-2|P46937-4|P46937-9 Isoform 9 of Transcriptional coactivator YAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30273.30273.5 34.29 33.96 1.188 9 1 1 0 1170.7412 5736.7305 M210m M225m N226n S227s TMT10 205 (K) AMLSQmNVTAPTSPPVQQNMmnsASGPLPDGWEQAMTQDGEIYYINHK (N) AM(0.0)LS(0.0)QM(0.99)N(0.0)VT(0.0)APT(0.0)S(0.0)PPVQQN(0.0)M(0.0)M(0.99)N(0.99)S(0.99)AS(0.0)GPLPDGWEQAM(0.0)T(0.0)QDGEIY(0.0)Y(0.0)IN(0.0)HK K:TMT10,m:Oxidized methionine,n:Deamidated,s:Phosphorylated S YAP1 54998.2 45 9 436.1 313.01 HUMAN 1 -9.4284 -9.1661 VQQPTDLSVDSVELT-p Q8IXS8;S416-p VQQPTDLSVDSVELT 0.271605501842383 0.0259210237700486 -0.178 -0.337666666666667 10.7289169749219 21.5717097038456 -0.178 -0.337666666666667 0.0845489663483217 0.00696352324436995 -2.10868281220913 -4.22032013101003 Q8IXS8 FAM126B Q8IXS8.S416.p_FAM126B Q8IXS8_S416s _1_1_416_416 Q8IXS8 Q8IXS8 Protein FAM126B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.23681.23681.4 21.87 21.87 2.013 5 1 1 0 794.1778 3093.7109 S416s TMT10 407 (K) QYVQQPTDLsVDSVELTPMKK (H) QY(0.0)VQQPT(0.0)DLS(0.99)VDS(0.0)VELT(0.0)PMKK K:TMT10,s:Phosphorylated S FAM126B 59101.9 2 5 955.1 195.77 HUMAN 1 -10.7289 -21.5717 VQRAGLGSPERPPKT-p Q9H6F5;S58-p VQRAGLGSPERPPKT 0.367999212728304 0.00203605351766751 -0.128333333333333 -0.904 8.05024941082805 42.0293070433604 -0.128333333333333 -0.904 0.156666109579863 6.26713854632957e-05 -1.64387644549503 -11.0828707633057 Q9H6F5 CCDC86 Q9H6F5.S58.p_CCDC86 Q9H6F5_S58s _1_1_58_58 Q9H6F5 Q9H6F5 Coiled-coil domain-containing protein 86 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8699.8907.4 14.95 14.95 99 1 1 1 0 412.4812 1566.9368 S58s TMT10 54 (R) AGLGsPERPPK (T) AGLGS(1.0)PERPPK K:TMT10,s:Phosphorylated S CCDC86 40349 12 5 346.1 352.36 HUMAN 1 -8.0502 -42.0293 VQRAPRISGEDRSSP-p Q06546;S303-p VQRAPRISGEDRSSP 0.955765707892428 0.00637911671662091 -0.012 0.711333333333333 0.385596022949122 31.5921766352122 -0.012 0.711333333333333 0.915040671071446 0.000693078355859678 -0.111762225994658 6.91981713463567 Q06546 GABPA Q06546.S303.p_GABPA Q06546_S303s _1_1_303_303 Q06546 Q06546 GA-binding protein alpha chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5459.5459.3 8.69 8.69 99 1 1 1 0 437.2203 1229.68 S303s TMT10 299 (R) APRIsGEDR (S) APRIS(1.0)GEDR s:Phosphorylated S GABPA 51807.8 1 1 5608.1 17.73 HUMAN 1 -0.3856 31.5922 VQRDVDASPSPLSVQ-p Q8IWZ8;S409-p VQRDVDASPSPLSVQ 0.948528283220643 0.345434288793013 -0.0103333333333333 -0.0976666666666666 0.455381929002459 6.1177837743222 -0.0103333333333333 -0.0976666666666666 0.900454571129983 0.244467776528663 -0.131070753078956 -1.30520250262678 Q8IWZ8 SUGP1 Q8IWZ8.S409.p_SUGP1 Q8IWZ8_S409s _1_1_409_409 Q8IWZ8 Q8IWZ8 SURP and G-patch domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21841.21841.2 13.97 13.97 2.444 3 1 1 0 940.4671 1799.9588 S409s Hydrogen 405 (R) DVDAsPSPLSVQDLK (G) DVDAS(0.99)PS(0.0)PLS(0.0)VQDLK K:TMT10-Lys-Only,s:Phosphorylated S SUGP1 72583.7 4 3 1701.1 120.31 HUMAN 1 -0.4554 -6.1178 VQRRKAASLMNLENI-p Q96NL6;S681-p VQRRKAASLMNLENI 0.342628074928273 0.40641450458175 0.183333333333333 0.0873333333333334 8.63999781077394 5.20590798262499 0.183333333333333 0.0873333333333334 0.136772951505162 0.301584628207465 1.7460452416724 1.14142259943795 Q96NL6 SCLT1 Q96NL6.S681.p_SCLT1 Q96NL6_S681s _1_1_681_681 Q96NL6 Q96NL6|Q96NL6-2|D6RBP0|Q96NL6-3 Sodium channel and clathrin linker 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30736.30736.2 10.49 10.49 99 1 1 1 0 692.8411 1304.7082 S681s TMT10 679 (K) AAsLMNLENI (-) AAS(1.0)LMNLENI s:Phosphorylated S SCLT1 81251.3 3 2 5085.1 23.14 HUMAN 1 8.64 5.2059 VQSGESDSDEEEESK-p O75592;S145-p VQSGESDSDEEEESK 0.870551152614169 0.14020172371019 -0.0295 0.159833333333333 1.17908604196753 11.2430257506608 -0.0295 0.159833333333333 0.76223940384934 0.0751099417088214 -0.318216053862264 2.19772513568424 O75592 MYCBP2 O75592.S145.p_MYCBP2 O75592_S143sS145s_2_2_143_145 O75592 O75592|O75592-2 E3 ubiquitin-protein ligase MYCBP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19500.19500.5 19.98 19.98 2.162 5 2 2 0 767.781 3674.9418 S143s S145s TMT10 136 (K) NSVQSGEsDsDEEEESKEPPIKLPK (I) NS(0.0)VQS(0.0)GES(0.99)DS(0.99)DEEEES(0.0)KEPPIKLPK K:TMT10,s:Phosphorylated S MYCBP2 518176.7 4 24 252.1 405.77 HUMAN 2 -1.1791 11.243 VQSGFICTNRKGAVI-p Q9P2H0;T772-p VQSGFICTNRKGAVI 0.016158495038515 0.000952253650599092 -1.53566666666667 -1.57633333333333 42.0297327899165 55.8111806288244 -1.53566666666667 -1.57633333333333 6.26652419777493e-05 2.62350524697047e-06 -11.1104786632217 -20.1587159872449 Q9P2H0 CEP126 Q9P2H0.T772.p_CEP126 Q9P2H0_S767sT772t_2_2_767_772 Q9P2H0 Q9P2H0 Centrosomal protein of 126 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.30290.30290.4 7.62 7.62 2.422 4 2 2 0 749.6237 2834.5711 S767s T772t N773n Hydrogen 765 (K) VQsGFICtnRKGAVIQPQSASK (V) VQS(0.99)GFICT(0.99)N(1.0)RKGAVIQPQS(0.0)AS(0.0)K C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated CEP126 127009 1 1 7121.1 7.62 HUMAN 1 -42.0297 -55.8112 VQSKKAESPEYVHMY-p Q96PZ2;S508-p VQSKKAESPEYVHMY 0.932495418439431 0.187178585400915 0.015 0.162666666666667 0.599214773979545 9.57182330323099 0.015 0.162666666666667 0.871121078741337 0.11036151906661 0.170085693166393 1.90667350591406 Q96PZ2 FAM111A Q96PZ2.S508.p_FAM111A Q96PZ2_S508s _1_1_508_508 Q96PZ2 Q96PZ2 Protein FAM111A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10683.10683.3 15.26 12.32 3.241 4 1 1 0 759.7091 2197.1476 S508s TMT10 505 (K) KAEsPEYVHMYTQR (S) KAES(0.99)PEY(0.0)VHMY(0.0)T(0.0)QR K:TMT10,s:Phosphorylated S FAM111A 71050.8 1 4 2239.1 92.18 HUMAN 1 0.5992 9.5718 VQSLRPQSPQLRQSD-p E7ESC5;S38-p VQSLRPQSPQLRQSD 0.328677632727316 0.150957672199772 0.151666666666667 -0.171333333333333 9.03596557902448 10.7979575641194 0.151666666666667 -0.171333333333333 0.124854282172423 0.0832155031819129 1.81458898330535 -2.11981410942522 E7ESC5 NotFound E7ESC5.S38.p_NotFound E7ESC5_S38s _1_1_38_38 E7ESC5 E7ESC5|F5GZA4|E9PG54|B8ZZB0|F8WEI8|F8WB40 Coiled-coil domain-containing protein 74B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10442.10442.4 11.93 11.93 4.967 3 1 1 0 586.3225 2262.2992 S38s TMT10 25 (R) QRPSVGVQSLRPQsPQLR (Q) QRPS(0.0)VGVQS(0.0)LRPQS(0.99)PQLR s:Phosphorylated S CCDC74B 29927.1 2 2 4565.1 29.74 HUMAN 1 9.036 -10.798 VQSPLPLSPLAGRPG-p M0QXA7;S631-p VQSPLPLSPLAGRPG 0.150283451076775 0.111189667466433 0.251333333333333 -0.204666666666667 16.5934794291267 12.5930681964893 0.251333333333333 -0.204666666666667 0.0219104883340698 0.0550418700117865 3.18299036197432 -2.43670480357499 M0QXA7 WIZ M0QXA7.S631.p_WIZ M0QXA7_S631s _1_1_631_631 M0QXA7 O95785|M0QXA7|O95785-3|O95785-4 Protein Wiz HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.28486.28486.5 20.8 20.8 1.112 3 1 1 0 1041.963 5125.8203 S631s TMT10 601 (K) EPPAGDLAPALAEDGPPTVAPGPVQSPLPLsPLAGRPGKPGAGPAQVPR (E) EPPAGDLAPALAEDGPPT(0.0)VAPGPVQS(0.0)PLPLS(0.99)PLAGRPGKPGAGPAQVPR K:TMT10,s:Phosphorylated S WIZ 104190.1 1 16 195.1 461.51 HUMAN 1 16.5935 -12.5931 VQTMKISSVPNSLSK-p Q5VZ89-7;S1672-p VQTMKISSVPNSLSK 0.0428370985731628 0.0124119605216437 -0.506666666666667 -0.403333333333333 30.5238606784225 26.6014445816561 -0.506666666666667 -0.403333333333333 0.000886367721529515 0.00218703403589992 -6.59310631498812 -5.45376434098295 Q5VZ89 DENND4C Q5VZ89.7.S1672.p_DENND4C Q5VZ89-7_S1672s _1_1_1672_1672 Q5VZ89-7 Q5VZ89-7|Q5VZ89-3 Isoform 2 of DENN domain-containing protein 4C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17893.17893.2 7.4 3.27 1.184 4 1 1 0 785.4361 1489.899 S1672s TMT10 1670 (K) ISsVPNSLSK (R) IS(0.0)S(0.99)VPNS(0.0)LS(0.0)K K:TMT10,s:Phosphorylated S DENND4C 220154.2 3 25 116.1 565.52 HUMAN 1 -30.5239 -26.6014 VQYQRQASPETSASP-p Q14789-2;S3015-p VQYQRQASPETSASP 0.612359630302695 0.758857944653842 0.0723333333333333 0.0296666666666667 3.94824532107822 1.65458461920822 0.0723333333333333 0.0296666666666667 0.402879776863497 0.683190058541619 0.907223659345757 0.430824766418884 Q14789 GOLGB1 Q14789.2.S3015.p_GOLGB1 Q14789-2_S3015s_1_1_3015_3015 Q14789-2 Q14789-2|Q14789-3|Q14789-4 Isoform 2 of Golgin subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24498.24498.4 16.2 16.2 1.713 7 1 1 0 726.3487 2821.4053 S3015s N3027n TMT10 3013 (R) QAsPETSASPDGSQnLVYETELLR (T) QAS(0.99)PET(0.0)S(0.0)AS(0.0)PDGS(0.0)QN(1.0)LVY(0.0)ET(0.0)ELLR s:Phosphorylated S,n:Deamidated GOLGB1 378557.2 4 27 93.1 610.98 HUMAN 1 3.9482 1.6546 VRAGRGFSLEELRVA-p P26373;S77-p VRAGRGFSLEELRVA 0.224767265517543 0.567716662994563 -0.282333333333333 0.0923333333333333 12.4498232125694 3.3152099681798 -0.282333333333333 0.0923333333333334 0.0568876087503464 0.466099892944223 -2.41238434415229 0.783622258978513 P26373 RPL13 P26373.S77.p_RPL13 P26373_S77s _1_1_77_77 P26373 P26373|P26373-2 60S ribosomal protein L13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.21933.21933.2 11.39 5.59 99 1 1 1 0 630.3151 1179.6571 S77s TMT10 75 (R) GFsLEELR (V) GFS(1.0)LEELR s:Phosphorylated S RPL13 24318.1 2 2 3743.1 44.08 HUMAN 1 -12.4498 3.3152 VRAKLVPSQEETKLS-p P49321-3;S423-p VRAKLVPSQEETKLS 0.140531810910528 0.0209167488563846 0.311333333333333 0.325666666666667 17.444645561543 22.9703821510294 0.311333333333333 0.325666666666667 0.0180109011985863 0.00504616892590043 3.35073124518058 4.54235035217749 P49321 NASP P49321.3.S423.p_NASP P49321-3_S423s _1_1_423_423 P49321-3 P49321-3|P49321-4 Isoform 3 of Nuclear autoantigenic sperm protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12048.12048.3 11.59 11.59 3.377 2 1 1 0 666.3831 1917.1624 S423s TMT10 418 (R) AKLVPsQEETK (L) AKLVPS(0.99)QEET(0.0)K K:TMT10,s:Phosphorylated S NASP 86552 9 15 87.1 626.46 HUMAN 1 17.4446 22.9704 VRALKNNSNDIVNAI-p E9PAV3;S2066-p VRALKNNSNDIVNAI 0.555215559535558 0.595194196798103 -0.0856666666666667 0.0593333333333333 4.71915942796738 3.05155600801554 -0.0856666666666667 0.0593333333333334 0.337352596552023 0.495272710682012 -1.05233183907755 0.730761009405452 E9PAV3 NACA E9PAV3.S2066.p_NACA E9PAV3_S2066s_1_1_2066_2066 E9PAV3 E9PAV3|E9PAV3-2|Q13765|F8VZJ2 Nascent polypeptide-associated complex subunit alpha, muscle-specific form HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.38068.38068.2 25.12 25.12 5.789 2 1 1 0 1002.4539 1907.9404 S2066s M2078m TMT10 2064 (K) NNsNDIVNAIMELTm (-) NNS(0.99)NDIVNAIM(0.0)ELT(0.0)M(0.99) s:Phosphorylated S,m:Oxidized methionine NACA 206102.3 10 15 533.1 279.72 HUMAN 1 -4.7192 3.0516 VRALKSCSPELQQKF-p P16152;S151-p VRALKSCSPELQQKF 0.906426058670281 0.0645436584836467 0.0206666666666667 0.210666666666667 0.837354943116229 15.841215412537 0.0206666666666667 0.210666666666667 0.824640206623231 0.0260542429631567 0.232567833286497 3.03564235705188 P16152 CBR1 P16152.S151.p_CBR1 P16152_S151s _1_1_151_151 P16152 P16152 Carbonyl reductase [NADPH] 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8614.8614.2 10.57 6.29 2.792 2 1 1 0 807.9028 1534.8299 S151s TMT10 149 (K) SCsPELQQK (F) S(0.0)CS(0.99)PELQQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CBR1 30659.7 3 2 3096.1 60.75 HUMAN 1 0.8374 15.8412 VRAQNGRTPEDERNL-p P18847;T162-p VRAQNGRTPEDERNL 0.176527526104725 0.0179228387100123 -0.277666666666667 -0.361333333333333 14.9399780533763 24.0510643691129 -0.277666666666667 -0.361333333333333 0.0320628552709771 0.00393453636003641 -2.8672015682674 -4.80168739360826 P18847 ATF3 P18847.T162.p_ATF3 P18847_T162t _1_1_162_162 P18847 P18847|P18847-5 Cyclic AMP-dependent transcription factor ATF-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17090.17090.5 14.75 12 99 1 1 1 0 559.8982 2715.4942 T162t TMT10 157 (R) AQNGRtPEDERNLFIQQIK (E) AQNGRT(1.0)PEDERNLFIQQIK K:TMT10,t:Phosphorylated T ATF3 20860.5 4 1 6000.1 14.75 HUMAN 1 -14.94 -24.0511 VRASSRVSGSFPEDS-p O15400;S129-p VRASSRVSGSFPEDS 0.472221263026578 0.584464991269668 -0.100666666666667 0.0543333333333333 6.0116377075403 3.14995436774727 -0.100666666666667 0.0543333333333333 0.25051643871782 0.484177454913742 -1.28663649521712 0.750600161714787 O15400 STX7 O15400.S129.p_STX7 O15400_S129s _1_1_129_129 O15400 O15400|O15400-2 Syntaxin-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14120.14120.2 11.88 11.88 1.136 4 1 1 0 839.4106 1597.8474 S129s TMT10 128 (R) VsGSFPEDSSK (E) VS(0.99)GS(0.0)FPEDS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S STX7 29929.1 8 7 1215.1 165.8 HUMAN 1 -6.0116 3.15 VRAVLNPTPIKRGRS-p P84095;T180-p VRAVLNPTPIKRGRS 0.591050297355019 0.0837241574580962 0.078 -0.200666666666667 4.20658841345051 14.2596611650572 0.078 -0.200666666666667 0.379613071724148 0.0375002258641209 0.956418864652675 -2.73903837525358 P84095 RHOG P84095.T180.p_RHOG P84095_T180t _1_1_180_180 P84095 P84095 Rho-related GTP-binding protein RhoG HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13235.13235.3 7.18 7.18 99 1 1 1 0 549.6646 1567.0096 T180t TMT10 175 (R) AVLNPtPIKR (G) AVLNPT(1.0)PIKR K:TMT10,t:Phosphorylated T RHOG 21764.5 1 1 7241.1 7.18 HUMAN 1 4.2066 -14.2597 VRAVPIGTPPKQMAV-p Q86TB9-4;T194-p VRAVPIGTPPKQMAV 0.0144292492620541 0.00298625627563545 -1.07566666666667 -0.802666666666667 44.1985464612633 37.9298511251248 -1.07566666666667 -0.802666666666667 3.80316663077635e-05 0.000161070084858482 -12.2233545278612 -9.23811317373686 Q86TB9 PATL1 Q86TB9.4.T194.p_PATL1 Q86TB9-4_T194t _1_1_194_194 Q86TB9-4 Q86TB9|Q86TB9-4 Isoform 4 of Protein PAT1 homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30519.30519.5 21.67 21.67 4.835 3 1 1 0 675.9794 3295.8878 T194t TMT10 189 (R) AVPIGtPPKQMAVPSFTQQILCPK (P) AVPIGT(0.99)PPKQMAVPS(0.0)FT(0.0)QQILCPK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T PATL1 80249 9 4 1540.1 133.07 HUMAN 1 -44.1985 -37.9299 VRAVRSRSWPASPRG-p Q86YD1;S36-p VRAVRSRSWPASPRG 0.771982430720165 0.669932805571312 -0.0546666666666667 -0.044 2.15046492117562 2.37712822940714 -0.0546666666666666 -0.044 0.609471648554165 0.578478439609355 -0.541871622099226 -0.590716194311752 Q86YD1 PTOV1 Q86YD1.S36.p_PTOV1 Q86YD1_S36s _1_1_36_36 Q86YD1 Q86YD1 Prostate tumor-overexpressed gene 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6678.6678.2 10.62 4.96 8.771 3 1 1 0 676.837 1272.701 S36s TMT10 34 (R) SRsWPASPR (G) S(0.0)RS(0.99)WPAS(0.0)PR s:Phosphorylated S PTOV1 47324.1 4 1 3738.1 44.18 HUMAN 1 -2.1505 -2.3771 VRAYTTGSPGSREAR-p Q6ZS17-4;S187-p VRAYTTGSPGSREAR 0.657664226760099 0.0100650858802549 -0.0613333333333333 -0.514333333333333 3.41259182221776 28.0602072563001 -0.0613333333333333 -0.514333333333333 0.455764839275708 0.0015630730470658 -0.803037734236711 -5.85447162648354 Q6ZS17 FAM65A Q6ZS17.4.S187.p_FAM65A Q6ZS17-4_S187s _1_1_187_187 Q6ZS17-4 Q6ZS17-4|A0A0A0MTL6|Q6ZS17-3|Q6ZS17-2 Isoform 4 of Rho family-interacting cell polarization regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.4912.4912.2 12.99 4.34 1.973 5 1 1 0 653.3057 1225.6374 S187s TMT10 182 (R) AYTTGsPGSR (E) AY(0.0)T(0.0)T(0.0)GS(0.99)PGS(0.0)R s:Phosphorylated S RIPOR1 135393.6 1 3 1530.1 133.82 HUMAN 1 -3.4126 -28.0602 VRCLGGRSPKSQDSY-p Q96S59;S467-p VRCLGGRSPKSQDSY 0.814089108611631 0.469002565895611 -0.041 -0.0803333333333333 1.71745284537495 4.3825335990017 -0.041 -0.0803333333333333 0.673371475573485 0.364541217829803 -0.445279166426235 -0.989401141947831 Q96S59 RANBP9 Q96S59.S467.p_RANBP9 Q96S59_S467s _1_1_467_467 Q96S59 Q96S59|Q96S59-3|Q96S59-2 Ran-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6714.6714.3 8.69 8.69 99 1 1 1 0 471.5879 1332.7822 S467s TMT10 462 (R) CLGGRsPK (S) CLGGRS(1.0)PK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RANBP9 78701.8 6 2 1268.2 160.1 HUMAN 1 -1.7175 -4.3825 VRDERSGTPTQDEMM-p Q5VT52;T732-p VRDERSGTPTQDEMM 0.850939292488898 0.146481720175667 0.0286666666666667 0.153 1.35634912416029 10.9867756903024 0.0286666666666667 0.153 0.731753970480009 0.079675065829326 0.361021726983246 2.15282348819711 Q5VT52 RPRD2 Q5VT52.T732.p_RPRD2 Q5VT52_T732t_1_1_732_732 Q5VT52 Q5VT52|Q5VT52-3|Q5VT52-2|Q5VT52-5 Regulation of nuclear pre-mRNA domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17639.17639.4 9.17 4.71 1.101 10 1 1 0 897.9299 3460.7464 T732t M738m M739m M750m TMT10 730 (R) SGtPTQDEmmDKPTSSSVDTmSLLSK (I) S(0.0)GT(0.99)PT(0.0)QDEM(1.0)M(1.0)DKPT(0.0)S(0.0)S(0.0)S(0.0)VDT(0.0)M(1.0)S(0.0)LLS(0.0)K K:TMT10,t:Phosphorylated T,m:Oxidized methionine RPRD2 156473.2 24 16 172.1 488.65 HUMAN 1 1.3563 10.9868 VREDDEDSDDDGSDE-p Q14669-3;S1365-p VREDDEDSDDDGSDE 0.975009344981545 0.159605376371289 0.00533333333333332 0.208 0.214350488792363 10.4811703455209 0.00533333333333332 0.208 0.951842190686661 0.0895123513356428 0.0632446995610108 2.06456387979792 Q14669 TRIP12 Q14669.3.S1365.p_TRIP12 Q14669-3_S1365sS1370s_2_2_1365_1370 Q14669-3 Q14669-3|Q14669-2 Isoform 3 of E3 ubiquitin-protein ligase TRIP12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.29595.30384.3 12.23 12.23 2.411 4 2 2 0 1310.8682 3770.6586 S1365s S1370s TMT10 1358 (R) VREDDEDsDDDGsDEEIDESLAAQFLNSGNVR (H) VREDDEDS(0.99)DDDGS(0.99)DEEIDES(0.0)LAAQFLNS(0.0)GNVR s:Phosphorylated S TRIP12 227456.1 1 23 234.1 420.47 HUMAN 1 0.2144 10.4812 VREPRGVSPEGRRPP-p C9J069;S484-p VREPRGVSPEGRRPP 0.488015843560099 0.143343715679587 0.125333333333333 0.242666666666667 5.73925916488147 11.1124939066475 0.125333333333333 0.242666666666667 0.266731362564992 0.0774017196027564 1.23797213992945 2.17483703168028 C9J069 C9orf172 C9J069.S484.p_C9orf172 C9J069_S484s _1_1_484_484 C9J069 C9J069 Uncharacterized protein C9orf172 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13828.13828.3 8.59 3.05 7.538 4 1 1 0 805.1011 2333.3251 S484s TMT10 482 (R) GVsPEGRRPPVVVNLSTSPR (R) GVS(0.99)PEGRRPPVVVNLS(0.0)T(0.0)S(0.0)PR s:Phosphorylated S C9orf172 107960.6 2 9 430.1 316.49 HUMAN 1 5.7393 11.1125 VRESGAPSPITFTSL-p Q8NEV8;S1733-p VRESGAPSPITFTSL 0.0584327871562607 0.136332819740827 0.465333333333333 -0.156 26.9345875642637 11.402505715283 0.465333333333333 -0.156 0.00202554195700594 0.0724018108415955 5.55103292447236 -2.22573520867667 Q8NEV8 EXPH5 Q8NEV8.S1733.p_EXPH5 Q8NEV8_S1733s _1_1_1733_1733 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21400.21400.3 11.12 11.12 4.013 5 1 1 0 591.2989 1691.9166 S1733s TMT10 1728 (R) ESGAPsPITFTSLR (E) ES(0.0)GAPS(0.99)PIT(0.0)FT(0.0)S(0.0)LR s:Phosphorylated S EXPH5 223884.5 1 25 129.1 537.25 HUMAN 1 26.9346 -11.4025 VRFKKGDSVGLRLAG-p A0A1B0GTW1;S579-p VRFKKGDSVGLRLAG 0.0625249430971656 0.0408169261816982 -0.453 0.276333333333333 26.1851513265191 18.6210795830011 -0.453 0.276333333333333 0.0024070486458595 0.0137370045374919 -5.3503384328016 3.58600444813457 A0A1B0GTW1 NotFound A0A1B0GTW1.S579.p_NotFound A0A1B0GTW1_S579s _1_1_579_579 A0A1B0GTW1 G3V1L9|Q07157|G5E9E7|A0A087X0K9|Q07157-2|A0A1B0GTW1|Q9UDY2-7|Q9UDY2-3|Q9UDY2-6|Q9UDY2-2|Q9UDY2-4|Q9UDY2-5 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7603.7603.2 7.7 7.7 99 1 1 1 0 685.3846 1289.7942 S579s TMT10 576 (K) KGDsVGLR (L) KGDS(1.0)VGLR K:TMT10,s:Phosphorylated S TJP2 141123.7 2 18 41.1 827.72 HUMAN 1 -26.1852 18.6211 VRFLKGKSIGLRLAG-p O95049-3;S410-p VRFLKGKSIGLRLAG 0.036930853563215 0.00268669212731026 -0.966666666666667 -0.872666666666667 32.781064498965 39.0541300743982 -0.966666666666667 -0.872666666666667 0.000527100647976979 0.000124333165989804 -7.32496995455464 -9.71395398328752 O95049 TJP3 O95049.3.S410.p_TJP3 O95049-3_S410s _1_1_410_410 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10209.10209.3 7.02 1.91 99 1 1 1 0 423.5876 1188.7829 S410s TMT10 408 (K) GKsIGLR (L) GKS(1.0)IGLR K:TMT10,s:Phosphorylated S TJP3 103593.6 2 10 125.1 544.41 HUMAN 1 -32.7811 -39.0541 VRFYVPPTQEDGVDP-p Q08945;T170-p VRFYVPPTQEDGVDP 0.57116329056416 0.0792799846609869 -0.097 0.255666666666667 4.47793628590844 14.6083805455382 -0.097 0.255666666666667 0.356620554881626 0.0346068400311745 -1.00745422017757 2.80354907344749 Q08945 SSRP1 Q08945.T170.p_SSRP1 Q08945_T170t _1_1_170_170 Q08945 Q08945 FACT complex subunit SSRP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.37077.37077.4 15.99 12.37 7.501 3 1 1 0 797.9049 3108.6294 T170t TMT10 165 (R) FYVPPtQEDGVDPVEAFAQNVLSK (A) FY(0.0)VPPT(0.99)QEDGVDPVEAFAQNVLS(0.0)K K:TMT10,t:Phosphorylated T SSRP1 81415.7 1 1 1270.1 159.97 HUMAN 1 -4.4779 14.6084 VRGALEISQTLLGII-p Q9H7D7;S201-p VRGALEISQTLLGII 0.180801698912031 0.085512394335663 -0.703666666666667 5.36066666666667 14.6500369288909 14.1352987512295 -0.703666666666667 5.36066666666667 0.0342764871938754 0.03858958649002 -2.81306936743142 3.10248873952528 Q9H7D7 WDR26 Q9H7D7.S201.p_WDR26 Q9H7D7_S201s _1_1_201_201 Q9H7D7 Q9H7D7 WD repeat-containing protein 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.37043.37043.3 13.66 13.66 1.227 2 1 1 0 631.3647 1812.1156 S201s TMT10 196 (R) GALEIsQTLLGIIVR (M) GALEIS(0.99)QT(0.0)LLGIIVR s:Phosphorylated S WDR26 73092.6 2 3 2543.1 79.17 HUMAN 1 -14.65 14.1353 VRGALRASPPSFPSG-p Q9C073;S193-p VRGALRASPPSFPSG 0.395256080797727 0.262863114456426 0.130333333333333 -0.131333333333333 7.43981941177784 7.64443013064693 0.130333333333333 -0.131333333333333 0.180309271545668 0.17201130349631 1.53780261035333 -1.57293546387623 Q9C073 FAM117A Q9C073.S193.p_FAM117A Q9C073_S193s _1_1_193_193 Q9C073 Q9C073 Protein FAM117A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19654.19860.3 14.42 7.37 3.521 4 1 1 0 702.3736 2025.1443 S193s TMT10 188 (R) GALRAsPPSFPSGSPVLR (L) GALRAS(0.99)PPS(0.0)FPS(0.0)GS(0.0)PVLR s:Phosphorylated S FAM117A 49059.4 1 6 640.1 255.25 HUMAN 1 7.4398 -7.6444 VRGARVLSPPGRRAR-p Q86VQ6;S32-p VRGARVLSPPGRRAR 0.642636606553244 0.769742903119448 -0.0676666666666667 0.0373333333333334 3.5900343506386 1.57070538076117 -0.0676666666666667 0.0373333333333333 0.437518644579105 0.696513377274383 -0.837905567787311 0.411439256620302 Q86VQ6 TXNRD3 Q86VQ6.S32.p_TXNRD3 Q86VQ6_S32s _1_1_32_32 Q86VQ6 Q86VQ6|H0YBQ0|H0YBI6|A0A1W2PR67 Thioredoxin reductase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.11429.11635.2 8.5 8.5 99 1 1 1 0 517.7835 954.5934 S32s TMT10 30 (R) VLsPPGR (R) VLS(1.0)PPGR s:Phosphorylated S TXNRD3 71752 7 3 3202.1 57.63 HUMAN 1 -3.59 1.5707 VRGDRVYSPYNHRHR-p Q9NS56;S585-p VRGDRVYSPYNHRHR 0.691409159033215 1 -0.063 1.85037170770859e-17 3.00430666833466 9.64327466553287e-16 -0.063 2.00308613164955e-17 0.500690479138442 1 -0.721286895738388 2.81849076673008e-16 Q9NS56 TOPORS Q9NS56.S585.p_TOPORS Q9NS56_S585s _1_1_585_585 Q9NS56 Q9NS56|Q9NS56-2 E3 ubiquitin-protein ligase Topors HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6750.6750.2 13.18 9.59 5.733 3 1 1 0 672.8186 1264.6636 S585s TMT10 583 (R) VYsPYNHR (H) VY(0.0)S(0.99)PY(0.0)NHR s:Phosphorylated S TOPORS 120222.5 11 7 580.1 266.48 HUMAN 1 -3.0043 0 VRGPVSGSPDSMNAS-p O14920;S672-p VRGPVSGSPDSMNAS 0.650361942319177 0.629016847859228 0.0706666666666667 0.0466666666666667 3.50414140261384 2.73755732581964 0.0706666666666666 0.0466666666666667 0.446257840747471 0.532407625884036 0.821074049912311 0.66649486689359 O14920 IKBKB O14920.S672.p_IKBKB O14920_S672s_1_1_672_672 O14920 O14920|O14920-2|O14920-4 Inhibitor of nuclear factor kappa-B kinase subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3653.3653.2 15.45 15.45 1.584 4 1 1 0 729.2903 1361.6114 S672s M676m Hydrogen 667 (R) GPVSGsPDSmNASR (L) GPVS(0.0)GS(0.99)PDS(0.0)M(1.0)NAS(0.0)R s:Phosphorylated S,m:Oxidized methionine IKBKB 87589.4 12 4 2475.1 81.85 HUMAN 1 3.5041 2.7376 VRGSEEDSPKKESKK-p O43719;S498-p VRGSEEDSPKKESKK 0.189806266686243 0.0554860227632965 0.803333333333333 -0.761666666666667 14.1199251459385 16.7311499226081 0.803333333333334 -0.761666666666667 0.03872643196685 0.0212268234488814 2.71496362115311 -3.20747250919719 O43719 HTATSF1 O43719.S498.p_HTATSF1 O43719_S498s _1_1_498_498 O43719 O43719 HIV Tat-specific factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6553.6553.3 14.79 5.02 2.694 3 1 1 0 914.4582 2661.3935 S498s TMT10 484 (K) ESEEGNPVRGSEEDsPKK (E) ES(0.0)EEGNPVRGS(0.0)EEDS(0.99)PKK K:TMT10,s:Phosphorylated S HTATSF1 86421.8 9 9 149.1 512 HUMAN 1 14.1199 -16.7311 VRGTGNASPDARASA-p A0A1B0GUS7;S4000-p VRGTGNASPDARASA 0.0271614528671907 0.0357830932437868 0.690333333333333 0.269 36.4422858389513 19.4687326446069 0.690333333333334 0.269 0.000226867045948543 0.0113012565910815 8.65834192859476 3.76244899962492 A0A1B0GUS7 NotFound A0A1B0GUS7.S4000.p_NotFound A0A1B0GUS7_S4000s _1_1_4000_4000 A0A1B0GUS7 A0A1B0GUS7|A0A1B0GVW8|B1AM27|O14795-2|I6L9J0|F8W8M9 Protein unc-13 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3925.3925.2 13.18 8.15 4.491 2 1 1 0 627.7876 1174.6014 S4000s TMT10 3995 (R) GTGNAsPDAR (A) GT(0.0)GNAS(0.99)PDAR s:Phosphorylated S UNC13B 488684 1 4 68.2 675.08 HUMAN 1 36.4423 19.4687 VRGVSSESSGDREKD-p Q13435;S346-p VRGVSSESSGDREKD 0.483726315617236 0.451534163853148 0.159 0.142333333333333 5.81081783785966 4.60213515798645 0.159 0.142333333333333 0.26237244124893 0.34656642323624 1.25078806030991 1.03042065693596 Q13435 SF3B2 Q13435.S346.p_SF3B2 Q13435_S346s _1_1_346_346 Q13435 Q13435|E9PPJ0 Splicing factor 3B subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4597.4597.2 9.66 7.58 1.105 4 1 1 0 888.4328 1695.8914 S346s TMT10 341 (R) GVSSEsSGDREK (D) GVS(0.0)S(0.0)ES(0.99)S(0.0)GDREK K:TMT10,s:Phosphorylated S SF3B2 100339.9 3 9 193.1 462.57 HUMAN 1 5.8108 4.6021 VRIARLSSGEGPTLA-p P22607-2;S447-p VRIARLSSGEGPTLA 0.037721822717877 0.00320981770772267 -0.611333333333333 -0.956 32.4485949023277 37.3530600421199 -0.611333333333333 -0.956 0.000569037004848083 0.000183947544898977 -7.21312017234786 -9.00221501159215 P22607 FGFR3 P22607.2.S447.p_FGFR3 P22607-2_S446sS447s_2_2_446_447 P22607-2 P22607-2|F8W9L4|P22607-4|P22607-3 Isoform 2 of Fibroblast growth factor receptor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.30103.30103.4 16.85 12.82 2.105 4 2 2 0 796.4075 3022.6825 S446s S447s TMT10 442 (R) IARLssGEGPTLANVSELELPADPK (W) IARLS(0.99)S(0.99)GEGPT(0.0)LANVS(0.0)ELELPADPK K:TMT10,s:Phosphorylated S FGFR3 89125.6 3 4 2711.1 73.11 HUMAN 1 -32.4486 -37.3531 VRIKETPSEQESKVF-p Q96JQ2;S319-p VRIKETPSEQESKVF 0.20295110955452 0.669069046411955 0.215666666666667 -0.0619999999999999 13.4245479190409 2.38614000564525 0.215666666666667 -0.062 0.0454511847379505 0.577279319311302 2.58785703220329 -0.592639685521762 Q96JQ2 CLMN Q96JQ2.S319.p_CLMN Q96JQ2_S319s _1_1_319_319 Q96JQ2 Q96JQ2 Calmin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9051.9051.3 8.85 8.85 3.336 3 1 1 0 681.7044 1963.1315 S319s TMT10 314 (R) IKETPsEQESK (V) IKET(0.0)PS(0.99)EQES(0.0)K K:TMT10,s:Phosphorylated S CLMN 112105.2 2 4 726.1 236.61 HUMAN 1 13.4245 -2.3861 VRIKTEPSSPLSDPS-p Q9ULJ3;S434-p VRIKTEPSSPLSDPS 0.948425460639786 0.278378787831534 0.00899999999999999 -0.113333333333333 0.456614258769306 7.3170822607615 0.00990147805468468 -0.113333333333333 0.900199099417174 0.185477730791246 0.131409426934922 -1.5159725301318 Q9ULJ3 ZBTB21 Q9ULJ3.S434.p_ZBTB21 Q9ULJ3_S434sS435s_2_2_434_435 Q9ULJ3 Q9ULJ3|Q9ULJ3-2 Zinc finger and BTB domain-containing protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21887.21887.3 9.23 9.23 1.135 5 2 2 0 825.0894 2313.3066 S434s S435s TMT10 429 (R) IKTEPssPLSDPSDIIR (V) IKT(0.0)EPS(0.99)S(0.99)PLS(0.0)DPS(0.0)DIIR K:TMT10,s:Phosphorylated S ZBTB21 120636.9 4 13 692.1 242.92 HUMAN 1 0.4566 -7.3171 VRINSDDSNLYLTAS-p Q9BZG1;S244-p VRINSDDSNLYLTAS 0.210104564023411 0.91142024325533 -0.271333333333333 0.0176666666666667 13.0722935726234 0.563534861954389 -0.271333333333333 0.0176666666666667 0.0492913420424431 0.878307343327664 -2.52410203563056 0.160486996599889 Q9BZG1 RAB34 Q9BZG1.S244.p_RAB34 Q9BZG1_S244s _1_1_244_244 Q9BZG1 Q9BZG1|Q9BZG1-2|Q9BZG1-4 Ras-related protein Rab-34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19792.19792.3 15.63 15.63 2.454 5 1 1 0 693.6866 1999.0748 S244s TMT10 239 (R) INSDDsNLYLTASK (K) INS(0.0)DDS(0.99)NLY(0.0)LT(0.0)AS(0.0)K K:TMT10,s:Phosphorylated S RAB34 29500.4 1 2 4420.1 31.72 HUMAN 1 -13.0723 0.5635 VRIQDIKTENGTCPS-p Q12948;T228-p VRIQDIKTENGTCPS 0.256105749737423 0.00254880172900523 0.163333333333333 0.826666666666667 11.2410574982283 39.640996877107 0.163333333333333 0.826666666666667 0.075143989765311 0.000108617627471029 2.19839558546786 9.97105068744013 Q12948 FOXC1 Q12948.T228.p_FOXC1 Q12948_T228t _1_1_228_228 Q12948 Q12948 Forkhead box protein C1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.37103.37103.5 7.02 2.23 1.237 6 1 1 0 820.4526 4018.1886 T228t TMT10 223 (R) IQDIKtENGTCPSPPQPLSPAAALGSGSAAAVPK (I) IQDIKT(0.99)ENGT(0.0)CPS(0.0)PPQPLS(0.0)PAAALGS(0.0)GS(0.0)AAAVPK K:TMT10,C:Carbamidomethylation,t:Phosphorylated T FOXC1 57130.1 1 1 3647.1 46.13 HUMAN 1 11.2411 39.641 VRIVKSESGYGFNVR-p Q96L92;S51-p VRIVKSESGYGFNVR 0.123350251698765 0.0103595807553658 0.876 -1.12566666666667 18.9118902570223 27.8625843167594 0.876 -1.12566666666667 0.0128472736352367 0.00163584280561404 3.64922351999531 -5.79892439195342 Q96L92 SNX27 Q96L92.S51.p_SNX27 Q96L92_S51s _1_1_51_51 Q96L92 Q96L92|Q96L92-3|H7C603 Sorting nexin-27 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.17638.17638.3 10.28 10.28 1.435 3 1 1 0 665.3545 1914.0849 S51s TMT10 46 (R) IVKSEsGYGFNVR (G) IVKS(0.0)ES(0.99)GY(0.0)GFNVR K:TMT10,s:Phosphorylated S SNX27 61891.7 1 2 3679.1 45.49 HUMAN 1 18.9119 -27.8626 VRKARRYSASLPAPV-p Q5VTQ0;S524-p VRKARRYSASLPAPV 0.278653304461677 0.166693150649712 -0.176333333333333 0.184333333333333 10.4953322898636 10.2327187386057 -0.176333333333333 0.184333333333333 0.0892209351746911 0.0947824927099346 -2.06791359609271 2.02133329545823 Q5VTQ0 TTC39B Q5VTQ0.S524.p_TTC39B Q5VTQ0_S524s _1_1_524_524 Q5VTQ0 Q5VTQ0|Q5VTQ0-4|Q5VTQ0-3|Q5VTQ0-6|Q5VTQ0-2|Q5VTQ0-5|Q5VTQ0-7 Tetratricopeptide repeat protein 39B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14746.14746.4 12.02 9.59 1.534 3 1 1 0 432.4971 1646.9994 S524s TMT10 522 (R) RYsASLPAPVK (L) RY(0.0)S(0.99)AS(0.0)LPAPVK K:TMT10,s:Phosphorylated S TTC39B 77924.2 5 2 3378.1 52.48 HUMAN 1 -10.4953 10.2327 VRKDASTSPMPTGSL-p Q86T90;S484-p VRKDASTSPMPTGSL 0.98219950821648 0.0802702113314385 -0.00366666666666667 -0.250333333333333 0.155126108031159 14.5354675110428 -0.00366666666666667 -0.250333333333333 0.964911292838003 0.0351927536050899 -0.0460642343892561 -2.79002137273389 Q86T90 KIAA1328 Q86T90.S484.p_KIAA1328 Q86T90_S484s _1_1_484_484 Q86T90 Q86T90|Q86T90-2|Q86T90-3 Protein hinderin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14486.14486.2 11.81 11.81 1.132 5 1 1 0 915.4591 1749.9457 S484s TMT10 480 (K) DASTsPMPTGSLK (D) DAS(0.0)T(0.0)S(0.99)PMPT(0.0)GS(0.0)LK K:TMT10,s:Phosphorylated S KIAA1328 66227.6 2 2 4523.1 30.35 HUMAN 1 -0.1551 -14.5355 VRKDKEGTPPLTKED-p Q03164-3;T337-p VRKDKEGTPPLTKED 0.993752696482329 0.0297146549527764 -0.00133333333333333 -0.359333333333333 0.054985957499339 20.6678116850883 -0.00133333333333333 -0.359333333333333 0.987418828466947 0.00857469796672986 -0.0165104545376809 -4.01983550932988 Q03164 KMT2A Q03164.3.T337.p_KMT2A Q03164-3_T337t _1_1_337_337 Q03164-3 Q03164-3|Q03164-2 Isoform 3 of Histone-lysine N-methyltransferase 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.10034.10034.3 11.99 6.21 10.205 2 1 1 0 818.7935 2374.3999 T337t TMT10 333 (K) DKEGtPPLTKEDK (T) DKEGT(0.99)PPLT(0.0)KEDK K:TMT10,t:Phosphorylated T KMT2A 436608.3 5 8 26.1 936.8 HUMAN 1 -0.055 -20.6678 VRKIFVGTKGIPHLV-p P62701;T133-p VRKIFVGTKGIPHLV 0.548266851140806 0.00285836968483942 -0.228 0.945666666666667 4.81719745581552 38.4834104481232 -0.228 0.945666666666667 0.329822481147746 0.000141794359495967 -1.07044960621782 9.46970904306156 P62701 RPS4X P62701.T133.p_RPS4X P62701_T133t _1_1_133_133 P62701 P62701 40S ribosomal protein S4, X isoform HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.15900.15900.3 7.53 7.53 99 1 1 1 0 520.6569 1479.9866 T133t TMT10 128 (R) KIFVGtK (G) KIFVGT(1.0)K K:TMT10,t:Phosphorylated T RPS4X 29825.4 1 1 2942.1 65.29 HUMAN 1 -4.8172 38.4834 VRKKPKVTPTKESYT-p Q5QJE6;T129-p VRKKPKVTPTKESYT 0.16127524660131 0.00246432253845191 -0.702666666666667 -0.946666666666667 15.8632370085035 39.9532473866918 -0.702666666666667 -0.946666666666667 0.0259224651417959 0.000101082334016131 -3.04197417596784 -10.1103523541859 Q5QJE6 DNTTIP2 Q5QJE6.T129.p_DNTTIP2 Q5QJE6_T129t _1_1_129_129 Q5QJE6 Q5QJE6|J3KP30 Deoxynucleotidyltransferase terminal-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.7619.7619.3 8.4 8.4 1.306 2 1 1 0 632.4011 1815.2238 T129t TMT10 125 (K) KPKVtPTK (E) KPKVT(0.99)PT(0.0)K K:TMT10,t:Phosphorylated T DNTTIP2 84866.9 3 6 448.1 309.47 HUMAN 1 -15.8632 -39.9532 VRKNKMASNIFGTPE-p Q9UK76;S49-p VRKNKMASNIFGTPE 0.431012713610678 0.147001334085503 -0.121666666666667 -0.203 6.72987650180376 10.964770988326 -0.121666666666667 -0.203 0.212330484052227 0.080079785497508 -1.41364164253771 -2.14897338688818 Q9UK76 HN1 Q9UK76.S49.p_HN1 Q9UK76_S49s _1_1_49_49 Q9UK76 Q9UK76-2|Q9UK76-3|J3KT51 Jupiter microtubule associated homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.26608.26608.3 17.46 17.46 2.244 3 1 1 0 840.4084 2439.2379 S49s TMT10 47 (K) MAsNIFGTPEENQASWAK (S) MAS(0.99)NIFGT(0.0)PEENQAS(0.0)WAK K:TMT10,s:Phosphorylated S JPT1 16014.2 2 3 705.1 239.23 HUMAN 1 -6.7299 -10.9648 VRKPRPLSMDLTARF-p Q9BY89;S284-p VRKPRPLSMDLTARF 0.108274227113564 0.0303766275012227 -0.332666666666667 -0.333666666666667 20.2693704189648 20.516116389116 -0.332666666666667 -0.333666666666667 0.00939859548735914 0.00887949692324227 -3.93700012306897 -3.98674639179438 Q9BY89 KIAA1671 Q9BY89.S284.p_KIAA1671 Q9BY89_S284s _1_1_284_284 Q9BY89 Q9BY89 Uncharacterized protein KIAA1671 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.13616.13616.3 12.18 12.18 2.325 2 1 1 0 641.6935 1843.0988 S284s TMT10 279 (R) KPRPLsMDLTAR (F) KPRPLS(0.99)MDLT(0.0)AR K:TMT10,s:Phosphorylated S KIAA1671 197734.4 5 5 105.1 590.35 HUMAN 1 -20.2694 -20.5161 VRKRGRSTDEYSEAD-p Q96T23;T1278-p VRKRGRSTDEYSEAD 0.221798193479614 0.0263581786161247 -0.229 0.301 12.5856669250626 21.4470764257158 -0.229 0.301 0.0551357526567582 0.00716625664401941 -2.436667443471 4.19233179984008 Q96T23 RSF1 Q96T23.T1278.p_RSF1 Q96T23_S1277sT1278tS1282s_3_3_1277_1282 Q96T23 Q96T23|Q96T23-2|Q96T23-3 Remodeling and spacing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8533.8533.5 19.96 19.96 1.491 5 3 3 0 697.6885 3244.513 S1277s T1278t S1282s Hydrogen 1275 (R) GRstDEYsEADEEEEEEEGKPSRK (R) GRS(0.99)T(0.99)DEY(0.0)S(0.99)EADEEEEEEEGKPS(0.0)RK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T RSF1 165358.1 12 33 39.1 857.38 HUMAN 1 -12.5857 21.4471 VRKRNVESGEEELAS-p Q96HS1;S80-p VRKRNVESGEEELAS 0.95234052937084 0.0118666492276053 0.01 0.524333333333333 0.421052749628481 26.9095782325916 0.01 0.524333333333334 0.907600497011499 0.00203723991574276 0.121604560374599 5.53663907008363 Q96HS1 PGAM5 Q96HS1.S80.p_PGAM5 Q96HS1_S80s _1_1_80_80 Q96HS1 Q96HS1|Q96HS1-2 Serine/threonine-protein phosphatase PGAM5, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.22859.22859.4 22.66 22.66 9.582 3 1 1 0 679.6024 2635.4182 S80s TMT10 77 (R) NVEsGEEELASKLDHYK (A) NVES(0.99)GEEELAS(0.0)KLDHY(0.0)K K:TMT10,s:Phosphorylated S PGAM5 32232.1 11 1 2502.1 80.98 HUMAN 1 0.4211 26.9096 VRKSFVESVEEIPFA-p Q7RTP6;S1516-p VRKSFVESVEEIPFA 0.947166532257833 0.24455370992734 -0.0123333333333333 0.132666666666667 0.466954782484433 8.06055057606757 -0.0123333333333333 0.132666666666667 0.898058280793399 0.156294948743358 -0.134248172575242 1.64513731469057 Q7RTP6 MICAL3 Q7RTP6.S1516.p_MICAL3 Q7RTP6_S1516s _1_1_1516_1516 Q7RTP6 Q7RTP6 [F-actin]-monooxygenase MICAL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.30922.30922.4 15.3 15.3 1.316 7 1 1 0 1084.2654 4254.0592 S1516s TMT10 1512 (K) SFVEsVEEIPFADDVEDTYDDKTEDSSLQEK (F) S(0.0)FVES(0.99)VEEIPFADDVEDT(0.0)Y(0.0)DDKT(0.0)EDS(0.0)S(0.0)LQEK K:TMT10,s:Phosphorylated S MICAL3 225431.9 1 17 190.1 466.81 HUMAN 1 -0.467 8.0606 VRLGDVISIQPCPDV-p P55072;S101-p VRLGDVISIQPCPDV 0.704571607940758 0.99377448792219 0.0566666666666667 -0.00133333333333333 2.85915880422774 0.0379793862245809 0.0566666666666667 -0.00133333333333338 0.517707098213965 0.991293050106412 0.691657750193513 -0.011424894587456 P55072 VCP P55072.S101.p_VCP P55072_S101s _1_1_101_101 P55072 P55072 Transitional endoplasmic reticulum ATPase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26277.26277.3 15.66 15.66 99 1 1 1 0 693.7028 1999.1298 S101s TMT10 96 (R) LGDVIsIQPCPDVK (Y) LGDVIS(1.0)IQPCPDVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VCP 90004.9 1 5 803.1 222.64 HUMAN 1 2.8592 -0.038 VRLGTSESLPCTAEE-p B4DTS2;S214-p VRLGTSESLPCTAEE 0.326351385633394 0.451534163853148 0.171333333333333 0.092 9.10905409244582 4.60244295740885 0.171333333333333 0.092 0.122770660054443 0.346541861753355 1.82724244186749 1.03047788821758 B4DTS2 NotFound B4DTS2.S214.p_NotFound B4DTS2_S214s _1_1_214_214 B4DTS2 B4DTS2|Q9BZL6|Q9BZL6-2 Serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20056.20056.3 12.38 12.87 2.385 5 1 1 0 686.9934 1978.9953 S214s TMT10 209 (R) LGTSEsLPCTAEELSR (S) LGT(0.0)S(0.0)ES(0.99)LPCT(0.0)AEELS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PRKD2 99053.8 2 2 1565.2 131.21 HUMAN 1 9.1091 4.6024 VRLIRGGSLPPVKRR-p Q13330;S639-p VRLIRGGSLPPVKRR 0.369489108717469 0.0765963553379062 -0.194 0.211 8.02035124456692 14.8066508410214 -0.194 0.211 0.157748368231273 0.0330624411155172 -1.63869083624579 2.84044215534147 Q13330 MTA1 Q13330.S639.p_MTA1 Q13330_S639s _1_1_639_639 Q13330 Q13330|E7ESY4|Q13330-3|F8W9Y9 Metastasis-associated protein MTA1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13341.13548.2 8.58 3.01 99 1 1 1 0 646.8723 1212.7716 S639s TMT10 637 (R) GGsLPPVK (R) GGS(1.0)LPPVK K:TMT10,s:Phosphorylated S MTA1 81469.4 4 9 1200.1 167 HUMAN 1 -8.0204 14.8067 VRLLGRNSNSKRLLG-p O75534;S514-p VRLLGRNSNSKRLLG 0.212264138240011 0.00433205919333218 -0.235 -0.786333333333333 12.9890976244412 34.7273649394534 -0.235 -0.786333333333333 0.050244697693473 0.000336715808079959 -2.50910255849179 -7.99438437088643 O75534 CSDE1 O75534.S514.p_CSDE1 O75534_S514s _1_1_514_514 O75534 O75534-4|O75534-3|O75534-2|E9PLT0 Cold shock domain-containing protein E1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8682.9036.3 10.84 10.84 2.265 2 1 1 0 509.6195 1446.8793 S514s TMT10 509 (R) LLGRNsNSK (R) LLGRNS(0.99)NS(0.0)K K:TMT10,s:Phosphorylated S CSDE1 89738.9 6 8 1077.1 180.35 HUMAN 1 -12.9891 -34.7274 VRLLKGNSPPAALGP-p Q9ULV8;S461-p VRLLKGNSPPAALGP 0.502812376540683 0.0133746183471685 0.114 -0.425333333333333 5.50806028117604 26.0589719391046 0.114 -0.425333333333333 0.281315700919589 0.00247800858182927 1.19640197054056 -5.31008281270395 Q9ULV8 CBLC Q9ULV8.S461.p_CBLC Q9ULV8_S461s _1_1_461_461 Q9ULV8 Q9ULV8|Q9ULV8-2 E3 ubiquitin-protein ligase CBL-C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16241.16241.2 14.7 11.24 99 1 1 1 0 884.9273 1688.8805 S461s TMT10 459 (K) GNsPPAALGPQDPAPA (-) GNS(1.0)PPAALGPQDPAPA s:Phosphorylated S CBLC 53482 2 1 6008.1 14.7 HUMAN 1 5.5081 -26.059 VRLLSSESEDEEEFI-p Q96AY2-2;S87-p VRLLSSESEDEEEFI 0.400124584561269 0.691045226554522 0.137333333333333 -0.0423333333333333 7.33858541061235 2.20065929257209 0.137333333333333 -0.0423333333333333 0.184561647777986 0.602468119817332 1.52016026857184 -0.552728168590052 Q96AY2 EME1 Q96AY2.2.S87.p_EME1 Q96AY2-2_S87s _1_1_87_87 Q96AY2-2 Q96AY2-2|D6RIT8 Isoform 2 of Crossover junction endonuclease EME1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28829.28829.3 22.15 22.15 2.199 3 1 1 0 801.0494 2321.171 S87s TMT10 82 (R) LLSSEsEDEEEFIPLAQR (L) LLS(0.0)S(0.0)ES(0.99)EDEEEFIPLAQR s:Phosphorylated S EME1 65747.5 2 4 1591.1 129.29 HUMAN 1 7.3386 -2.2007 VRLPREPSNPERLKG-p P23588;S131-p VRLPREPSNPERLKG 0.0142975502007577 0.00387979257248964 -1.01833333333333 -0.599666666666667 44.4737703484858 35.6270576172035 -1.01833333333333 -0.599666666666667 3.56962804612792e-05 0.000273712252251194 -12.3718155636358 -8.32794397376975 P23588 EIF4B P23588.S131.p_EIF4B P23588_S131s _1_1_131_131 P23588 E7EX17|P23588|F8VSC7|F8VYE9|F8VRU1 Eukaryotic translation initiation factor 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11581.11581.4 12.5 12.5 99 1 1 1 0 494.2798 1894.1275 S131s TMT10 126 (R) LPREPsNPERLK (G) LPREPS(1.0)NPERLK K:TMT10,s:Phosphorylated S EIF4B 69207 5 2 146.1 516.36 HUMAN 1 -44.4738 -35.6271 VRLSSSDSIGPDVTD-p Q15648;S774-p VRLSSSDSIGPDVTD 0.842210684381321 0.00941190170382178 0.0356666666666667 0.454333333333333 1.44158066321203 28.6014567139884 0.0356666666666666 0.454333333333333 0.717533089568645 0.0013799213326632 0.38124921544936 6.00869953117687 Q15648 MED1 Q15648.S774.p_MED1 Q15648_S774s _1_1_774_774 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.37516.37516.3 16 15.25 1.194 7 1 1 0 996.4949 2907.5087 S774s TMT10 769 (R) LSSSDsIGPDVTDILSDIAEEASK (L) LS(0.0)S(0.0)S(0.0)DS(0.99)IGPDVT(0.0)DILS(0.0)DIAEEAS(0.0)K K:TMT10,s:Phosphorylated S MED1 169445 1 7 115.1 566.87 HUMAN 1 1.4416 28.6015 VRLSSTDSLESLLSK-p Q9Y450-2;S249-p VRLSSTDSLESLLSK 0.886118944763575 0.0307253241076407 -0.0366666666666667 -0.361666666666667 1.02681220300646 20.4431151142858 -0.0366666666666667 -0.361666666666667 0.789439367221811 0.00903001535012521 -0.280590529546473 -3.9708783493717 Q9Y450 HBS1L Q9Y450.2.S249.p_HBS1L Q9Y450-2_S249s _1_1_249_249 Q9Y450-2 Q9Y450-2 Isoform 2 of HBS1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.29588.29588.3 13.2 7.8 1.143 6 1 1 0 640.0111 1838.0523 S249s TMT10 244 (R) LSSTDsLESLLSK (N) LS(0.0)S(0.0)T(0.0)DS(0.99)LES(0.0)LLS(0.0)K K:TMT10,s:Phosphorylated S HBS1L 70811.6 1 8 2070.1 99.42 HUMAN 1 -1.0268 -20.4431 VRLVEPHSPSPSSKF-p O15014;S576-p VRLVEPHSPSPSSKF 0.478706323591988 0.0816523943626088 0.1 0.24 5.88719355395487 14.4219265481946 0.1 0.24 0.257798653459034 0.0361249575291895 1.26444189124134 2.76899755129375 O15014 ZNF609 O15014.S576.p_ZNF609 O15014_S576s _1_1_576_576 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9619.9619.3 19.57 19.57 2.583 4 1 1 0 601.6539 1722.9791 S576s TMT10 571 (R) LVEPHsPSPSSK (F) LVEPHS(0.99)PS(0.0)PS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ZNF609 152443.5 6 14 63.1 699.07 HUMAN 1 5.8872 14.4219 VRMARLLSPGARLIT-p P21964;S131-p VRMARLLSPGARLIT 0.955750339780897 0.364700527803003 -0.00833333333333334 -0.100666666666667 0.386037833207911 5.80652799149444 -0.00833333333333334 -0.100666666666667 0.914947588195725 0.262631733867542 -0.111885280572879 -1.24973202332238 P21964 COMT P21964.S131.p_COMT P21964_S131s _1_1_131_131 P21964 P21964|E7EUU8|P21964-2|F8WBW9 Catechol O-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12636.12636.2 10.31 3.39 99 1 1 1 0 511.783 942.5934 S131s TMT10 129 (R) LLsPGAR (L) LLS(1.0)PGAR s:Phosphorylated S COMT 30492.9 2 1 5040.1 23.6 HUMAN 1 -0.386 -5.8065 VRPESICSMPAYDRI-p Q5VTI5;S396-p VRPESICSMPAYDRI 0.263054148508799 0.0764414152524904 0.275 0.337333333333333 11.0000396844895 14.8175387980315 0.275 0.337333333333333 0.0794320976431164 0.032979655912546 2.15611629659574 2.84247274108243 Q5VTI5 NotFound Q5VTI5.S396.p_NotFound Q5VTI5_S393sS396s_2_2_393_396 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20330.20330.4 10.5 10.5 1.16 12 2 2 0 1218.5262 4695.1434 S393s S396s M397m TMT10 366 (R) RVPEYYGPYSSQYPDDYQYYPPGVRPEsICsmPAYDR (I) RVPEY(0.0)Y(0.0)GPY(0.0)S(0.0)S(0.0)QY(0.0)PDDY(0.0)QY(0.0)Y(0.0)PPGVRPES(0.99)ICS(0.99)M(1.0)PAY(0.0)DR C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine PLEKHA6 119745.7 1 37 52.1 743.36 HUMAN 1 11 14.8175 VRPPQIKSLPATPQG-p Q13111;S255-p VRPPQIKSLPATPQG 0.307533175710051 0.152458161209565 0.185333333333333 -0.158333333333333 9.570058512146 10.7419077184909 0.185333333333333 -0.158333333333333 0.110406374483989 0.0842964388792826 1.90710171119191 -2.11002707246072 Q13111 CHAF1A Q13111.S255.p_CHAF1A Q13111_S255s _1_1_255_255 Q13111 Q13111|Q13111-3|Q13111-2 Chromatin assembly factor 1 subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12083.12083.3 10.23 10.23 3.834 2 1 1 0 479.6017 1356.8251 S255s TMT10 255 (K) sLPATPQGK (N) S(0.99)LPAT(0.0)PQGK K:TMT10,s:Phosphorylated S CHAF1A 108122.1 2 9 633.1 256.49 HUMAN 1 9.5701 -10.7419 VRPPQQYSDDEDDYE-p Q92560;S395-p VRPPQQYSDDEDDYE 0.253422222265936 0.312062505252477 0.319333333333333 -0.117333333333333 11.3646179459911 6.68431488880308 0.319333333333333 -0.117333333333333 0.0730362060864455 0.214569757866804 2.22011506985654 -1.40526214031582 Q92560 BAP1 Q92560.S395.p_BAP1 Q92560_S395s _1_1_395_395 Q92560 Q92560|F8W6N3 Ubiquitin carboxyl-terminal hydrolase BAP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.13536.13536.4 20.61 20.61 1.918 5 1 1 0 959.1412 3753.5907 S395s Hydrogen 386 (R) VPVRPPQQYsDDEDDYEDDEEDDVQNTNSALR (Y) VPVRPPQQY(0.0)S(0.99)DDEDDY(0.0)EDDEEDDVQNT(0.0)NS(0.0)ALR s:Phosphorylated S BAP1 80816.6 3 4 1051.1 183.41 HUMAN 1 11.3646 -6.6843 VRPPTVMSPSGNPQL-p O00512;S35-p VRPPTVMSPSGNPQL 0.222725896447283 0.339307534497149 0.187333333333333 0.106333333333333 12.5474738746436 6.21844517457794 0.187333333333333 0.106333333333333 0.0556227699631959 0.238866630053426 2.42983484458522 1.32306040262005 O00512 BCL9 O00512.S35.p_BCL9 O00512_S35s _1_1_35_35 O00512 O00512 B-cell CLL/lymphoma 9 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19878.19878.3 15.53 15.53 1.25 4 1 1 0 979.1624 2855.516 S35s TMT10 24 (K) QEVMVRPPTVMsPSGNPQLDSK (F) Q(0.0)EVM(0.0)VRPPT(0.0)VM(0.0)S(0.99)PS(0.0)GN(0.0)PQLDS(0.0)K K:TMT10,s:Phosphorylated S BCL9 149515.8 4 3 313.1 369.9 HUMAN 1 12.5475 6.2184 VRPPVQVYGIEGRYA-p P48047;Y35-p VRPPVQVYGIEGRYA 0.234922236166836 0.639729181572277 0.542333333333333 -0.0803333333333333 12.0593093932756 2.64152420792052 0.542333333333333 -0.0803333333333333 0.0622399250030894 0.544311586717932 2.34285883119124 -0.646526753339492 P48047 ATP5O P48047.Y35.p_ATP5O P48047_Y35y _1_1_35_35 P48047 P48047 ATP synthase subunit O, mitochondrial GG20160819_MSz_CCLE_T4D7_pY_Injection_02.22100.22100.3 8.15 3.49 99 1 1 1 0 631.3525 1812.0693 Y35y TMT10 27 (K) LVRPPVQVyGIEGR (Y) LVRPPVQVY(1.0)GIEGR y:Phosphorylated Y ATP5O 23391 1 1 402.1 8.15 HUMAN 1 12.0593 -2.6415 VRPQAEGTPGSTGKR-p Q6IQ32;T866-p VRPQAEGTPGSTGKR 0.426515655420314 0.0103832756361471 0.139666666666667 -0.560666666666667 6.81646058861205 27.846837443411 0.139666666666667 -0.560666666666667 0.208139228830338 0.00164178489489784 1.42884579635675 -5.79451568986986 Q6IQ32 ADNP2 Q6IQ32.T866.p_ADNP2 Q6IQ32_T866t _1_1_866_866 Q6IQ32 Q6IQ32 Activity-dependent neuroprotector homeobox protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4908.4908.3 7.85 3.74 7.071 3 1 1 0 693.7083 1999.1449 T866t TMT10 859 (K) VRPQAEGtPGSTGKR (V) VRPQAEGT(0.99)PGS(0.0)T(0.0)GKR K:TMT10,t:Phosphorylated T ADNP2 124371.4 2 2 4402.1 31.96 HUMAN 1 6.8165 -27.8468 VRPQDTVSVIGGVAG-p P55786;S811-p VRPQDTVSVIGGVAG 0.20352936945728 0.00804251812163316 0.244666666666667 0.475666666666667 13.3952786064668 29.8426223585258 0.244666666666667 0.475666666666667 0.0457585379151833 0.00103690212413415 2.58254396693694 6.37434958342435 P55786 NPEPPS P55786.S811.p_NPEPPS P55786_S811s _1_1_811_811 P55786 P55786|E9PLK3|P55786-2 Puromycin-sensitive aminopeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.30849.30849.5 13.17 13.17 1.172 5 1 1 0 651.7554 3174.7775 S811s TMT10 795 (K) VLTFALSEEVRPQDTVsVIGGVAGGSK (H) VLT(0.0)FALS(0.0)EEVRPQDT(0.0)VS(0.99)VIGGVAGGS(0.0)K K:TMT10,s:Phosphorylated S NPEPPS 103959 2 6 1607.1 127.86 HUMAN 1 13.3953 29.8426 VRPQESRSLSPSHLT-p Q5T200;S875-p VRPQESRSLSPSHLT 0.927262755102574 0.610696958223465 -0.016 -0.052 0.648345400219244 2.90958306617123 -0.016 -0.052 0.861321840968491 0.511730960665423 -0.183183973520861 -0.701890175722509 Q5T200 ZC3H13 Q5T200.S875.p_ZC3H13 Q5T200_S875sS877s_2_2_875_877 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.6991.6991.3 13.52 13.52 4.432 4 2 2 0 581.5793 1582.7932 S875s S877s Hydrogen 875 (R) sLsPSHLTEDRQGR (W) S(0.99)LS(0.99)PS(0.0)HLT(0.0)EDRQGR s:Phosphorylated S ZC3H13 197316.7 5 41 24.1 987.82 HUMAN 1 -0.6483 -2.9096 VRQGPSGSEDDEQEL-p Q9Y2E8-2;S589-p VRQGPSGSEDDEQEL 0.359509665771956 0.124165409708268 0.173666666666667 0.160333333333333 8.25557330883801 11.9533100440862 0.173666666666667 0.160333333333333 0.149431676572739 0.0637777208914631 1.6794691149407 2.32290210160581 Q9Y2E8 SLC9A8 Q9Y2E8.2.S589.p_SLC9A8 Q9Y2E8-2_S589s _1_1_589_589 Q9Y2E8-2 Q9Y2E8-2 Isoform 2 of Sodium/hydrogen exchanger 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.25114.25114.3 11.74 11.74 2.384 3 1 1 0 892.396 2595.2048 S589s TMT10 578 (K) WYEEVRQGPSGsEDDEQELL (-) WY(0.0)EEVRQGPS(0.0)GS(0.99)EDDEQELL s:Phosphorylated S SLC9A8 67673.2 2 1 4249.1 34.7 HUMAN 1 8.2556 11.9533 VRQGRRQSEPTKHLL-p A1L390;S448-p VRQGRRQSEPTKHLL 0.0948633510902073 0.00880596407617896 0.715333333333333 0.687 21.7585039539018 29.1377547036883 0.715333333333333 0.687 0.00667036508606452 0.00121961997775703 4.26692272439439 6.16460975058669 A1L390 PLEKHG3 A1L390.S448.p_PLEKHG3 A1L390_S448s _1_1_448_448 A1L390 A1L390|A1L390-3 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3892.3892.3 7.17 7.17 3.126 2 1 1 0 461.9184 1303.7734 S448s TMT10 446 (R) RQsEPTK (H) RQS(0.99)EPT(0.0)K K:TMT10,s:Phosphorylated S PLEKHG3 135322.7 1 4 284.1 386.18 HUMAN 1 21.7585 29.1378 VRQKEEVSPEAVGVT-p O15164;S209-p VRQKEEVSPEAVGVT 0.752487214761957 0.173661964995781 0.0843333333333333 0.138333333333333 2.35619230188945 9.99769396010449 0.0843333333333334 0.138333333333333 0.581273828846578 0.100053112630638 0.586314313855643 1.98050912631097 O15164 TRIM24 O15164.S209.p_TRIM24 O15164_S209s _1_1_209_209 O15164 O15164|O15164-2 Transcription intermediary factor 1-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.18344.18344.5 16.32 16.32 8.979 3 1 1 0 705.5724 3443.8713 S209s TMT10 204 (R) QKEEVsPEAVGVTSQRPVFCPFHK (K) QKEEVS(0.99)PEAVGVT(0.0)S(0.0)QRPVFCPFHK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S TRIM24 118769 1 2 598.1 263.51 HUMAN 1 2.3562 9.9977 VRQSHSESPSLQSKS-p Q9UQ35;S1083-p VRQSHSESPSLQSKS 0.697352295056568 0.0851340067098796 0.0536666666666667 0.257 2.94001932216242 14.159640682614 0.0536666666666667 0.257 0.508157181717319 0.0383738993164387 0.708202993493213 2.72062147995203 Q9UQ35 SRRM2 Q9UQ35.S1083.p_SRRM2 Q9UQ35_S1083s_1_1_1083_1083 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7147.7147.2 18.07 18.07 2.64 5 1 1 0 803.8697 1543.7914 Q1078q S1083s Hydrogen 1078 (R) qSHSEsPSLQSK (S) Q(1.0)S(0.0)HS(0.0)ES(0.99)PS(0.0)LQS(0.0)K K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S SRRM2 300351.7 15 57 2.1 3310.34 HUMAN 1 2.94 14.1596 VRRAVKDTLSNPQSP-p Q96PU5;T473-p VRRAVKDTLSNPQSP 0.3317060213419 0.029857726918057 0.148 0.324 8.95023109866907 20.6375664411955 0.148 0.324 0.127343531661966 0.00863462251252978 1.79974749354406 4.01322563541872 Q96PU5 NEDD4L Q96PU5.T473.p_NEDD4L Q96PU5_T473tS487s_2_2_473_487 Q96PU5 A0A1B0GVY1|Q96PU5|Q96PU5-7|Q96PU5-5|Q96PU5-6|Q96PU5-2|Q96PU5-3|Q96PU5-4|Q96PU5-9 E3 ubiquitin-protein ligase NEDD4-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11063.11063.4 16.13 16.13 1.366 6 2 2 0 824.4119 3134.6838 T473t S487s TMT10 472 (K) DtLSNPQSPQPSPYNsPKPQHK (V) DT(0.99)LS(0.0)NPQS(0.0)PQPS(0.0)PY(0.0)NS(0.99)PKPQHK K:TMT10,t:Phosphorylated T,s:Phosphorylated S NEDD4L 112272 14 20 495.1 293.21 HUMAN 1 8.9502 20.6376 VRRESCGSSVLTDFE-p O15231-3;S469-p VRRESCGSSVLTDFE 0.80894448179027 0.485998212099175 -0.044 -0.0716666666666666 1.76888708415401 4.1860539444125 -0.044 -0.0716666666666666 0.665443659844397 0.381412222055277 -0.456989543173329 -0.952364197071749 O15231 ZNF185 O15231.3.S469.p_ZNF185 O15231-3_S466sS469s_2_2_466_469 O15231-3 O15231-8|O15231-3|O15231-7|O15231-4|H7BZT5 Isoform 3 of Zinc finger protein 185 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21427.21427.4 13.22 11.91 1.238 5 2 2 0 759.1205 2873.5282 S466s S469s TMT10 464 (R) REsCGsSVLTDFEGKDVATK (V) RES(0.99)CGS(0.99)S(0.0)VLT(0.0)DFEGKDVAT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZNF185 74524.1 2 20 166.1 494.62 HUMAN 1 -1.7689 -4.1861 VRRNLRASAREVRQE-p Q96CW6;S93-p VRRNLRASAREVRQE 0.256425728522692 0.030498689006917 -0.445666666666667 -0.429 11.2277762670477 20.4845025441749 -0.445666666666667 -0.429 0.075374140574413 0.00894436977950578 -2.19606285288582 -3.97987017628102 Q96CW6 SLC7A6OS Q96CW6.S93.p_SLC7A6OS Q96CW6_S93s _1_1_93_93 Q96CW6 Q96CW6 Probable RNA polymerase II nuclear localization protein SLC7A6OS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.3797.3797.3 10 3.01 99 1 1 1 0 366.1992 1016.6162 S93s TMT10 89 (R) NLRAsAR (E) NLRAS(1.0)AR s:Phosphorylated S SLC7A6OS 35255.4 1 2 1926.1 106.59 HUMAN 1 -11.2278 -20.4845 VRRPRAASDSNPAGP-p Q9BUU2;S132-p VRRPRAASDSNPAGP 0.523924502427807 0.17766929288265 -0.107333333333333 0.152333333333333 5.19383531228301 9.87047517345425 -0.107333333333333 0.152333333333333 0.302424150060934 0.103027338924918 -1.13946370916573 1.95843567302106 Q9BUU2 METTL22 Q9BUU2.S132.p_METTL22 Q9BUU2_S132s _1_1_132_132 Q9BUU2 Q9BUU2|Q9BUU2-2 Methyltransferase-like protein 22 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9855.9855.2 10.05 6.99 3.054 2 1 1 0 968.9986 1857.023 S132s TMT10 130 (R) AAsDSNPAGPLRDK (V) AAS(0.99)DS(0.0)NPAGPLRDK K:TMT10,s:Phosphorylated S METTL22 44884.7 3 2 4651.1 28.35 HUMAN 1 -5.1938 9.8705 VRRRPEASPVQKKEK-p Q3KQU3;S410-p VRRRPEASPVQKKEK 0.767491684982091 0.00179199224373901 0.0443333333333333 -0.995333333333333 2.20059426766118 43.3058239430199 0.0443333333333333 -0.995333333333334 0.602477140362315 4.67108323024519e-05 0.552780663719966 -11.7230868341097 Q3KQU3 MAP7D1 Q3KQU3.S410.p_MAP7D1 Q3KQU3_S410s _1_1_410_410 Q3KQU3 Q3KQU3|Q3KQU3-4|Q3KQU3-2 MAP7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8726.8726.3 8.4 8.4 99 1 1 1 0 584.3408 1671.0408 S410s TMT10 407 (R) PEAsPVQKK (E) PEAS(1.0)PVQKK K:TMT10,s:Phosphorylated S MAP7D1 93160.6 2 14 160.1 495.56 HUMAN 1 2.2006 -43.3058 VRRSFRKSPEHPVDD-p Q14667;S2094-p VRRSFRKSPEHPVDD 0.148266672319898 0.930942605622665 -0.328666666666667 -0.00899999999999999 16.7432565685443 0.438422096441474 -0.328666666666667 -0.009 0.0211677327201053 0.903977852469668 -3.21223659231048 -0.126390074876557 Q14667 KIAA0100 Q14667.S2094.p_KIAA0100 Q14667_S2094s _1_1_2094_2094 Q14667 Q14667|Q14667-2|Q08E86|K7EQ86 Protein KIAA0100 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.9449.9449.3 8.56 8.56 99 1 1 1 0 716.3831 2067.1689 S2094s TMT10 2093 (R) KsPEHPVDDIDK (M) KS(1.0)PEHPVDDIDK K:TMT10,s:Phosphorylated S KIAA0100 256263 3 5 3058.1 61.86 HUMAN 1 -16.7433 -0.4384 VRSCPKASPRLQKER-p Q3T8J9-3;S2009-p VRSCPKASPRLQKER 0.0622506947834567 0.0033249803985 0.857 -1.124 26.2589415462519 37.1003561492236 0.857 -1.124 0.00236649638493218 0.00019496847065989 5.36985858204886 -8.90056896205316 Q3T8J9 GON4L Q3T8J9.3.S2009.p_GON4L Q3T8J9-3_S2009s _1_1_2009_2009 Q3T8J9-3 Q3T8J9|Q3T8J9-3 Isoform 3 of GON-4-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4464.4464.2 10.04 3.2 4.228 2 1 1 0 720.874 1360.7771 S2009s TMT10 2004 (R) SCPKAsPR (L) S(0.0)CPKAS(0.99)PR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GON4L 250541.8 1 21 291.1 381.52 HUMAN 1 26.2589 -37.1004 VRSGKNSSPINCSRA-p Q15723;S344-p VRSGKNSSPINCSRA 0.0884809517257935 0.0128313351438553 0.662666666666667 -0.630333333333333 22.4370958963625 26.3550737389523 0.662666666666667 -0.630333333333333 0.0057054566553974 0.00231468888452987 4.42260411919884 -5.38816192565165 Q15723 ELF2 Q15723.S344.p_ELF2 Q15723_S344s _1_1_344_344 Q15723 Q15723|Q15723-1|Q15723-3|Q15723-2|Q15723-4 ETS-related transcription factor Elf-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.4644.4644.2 12.25 12.25 1.315 3 1 1 0 672.3028 1263.6313 S344s TMT10 342 (K) NSsPINCSR (A) NS(0.0)S(0.99)PINCS(0.0)R C:Carbamidomethylation,s:Phosphorylated S ELF2 64422.1 2 5 1339.1 152.08 HUMAN 1 22.4371 -26.3551 VRSHLGISPYQCNIC-p Q92766;S669-p VRSHLGISPYQCNIC 0.470707497424437 0.568662466865634 -0.0986666666666667 0.0596666666666667 6.04088308888162 3.30399005278172 -0.0986666666666667 0.0596666666666667 0.248835128864694 0.467305609961845 -1.29184331159819 0.781391612000873 Q92766 RREB1 Q92766.S669.p_RREB1 Q92766_S669s _1_1_669_669 Q92766 Q92766-2|Q92766-3|Q92766-5 Ras-responsive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.24765.24765.4 23.24 23.24 3.717 4 1 1 0 716.5968 2783.3897 S669s TMT10 664 (R) SHLGIsPYQCNICDYIAADK (A) S(0.0)HLGIS(0.99)PY(0.0)QCNICDY(0.0)IAADK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RREB1 184269.8 2 15 179.1 480.48 HUMAN 1 -6.0409 3.304 VRSKLSPSPSLRKSS-p Q5T200;S209-p VRSKLSPSPSLRKSS 0.653780563370571 0.0991698827134191 0.0706666666666667 0.191 3.46058285080386 13.2634766509948 0.0706666666666667 0.191 0.450756206133487 0.0471685292576332 0.812505135312954 2.55721699727308 Q5T200 ZC3H13 Q5T200.S209.p_ZC3H13 Q5T200_S207sS209s_2_2_207_209 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12204.12204.2 8.06 7.1 1.352 4 2 2 0 845.4402 1529.9415 S207s S209s TMT10 204 (R) SKLsPsPSLR (K) S(0.0)KLS(0.99)PS(0.99)PS(0.0)LR K:TMT10,s:Phosphorylated S ZC3H13 197316.7 5 32 24.1 987.82 HUMAN 1 3.4606 13.2635 VRSLLGRSLELNGAV-p Q9NRL3-3;S206-p VRSLLGRSLELNGAV 0.675985039090808 0.979326453741939 0.074 0.00300000000000003 3.18593868744185 0.129393898719994 0.074 0.00300000000000005 0.480182282053894 0.970645421046154 0.757932013766661 0.0385281413368218 Q9NRL3 STRN4 Q9NRL3.3.S206.p_STRN4 Q9NRL3-3_S206s_1_1_206_206 Q9NRL3-3 Q9NRL3-3|F5GYK2|Q9NRL3-2 Isoform 3 of Striatin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.21202.21730.3 16.69 16.69 2.303 3 1 1 0 821.4228 2381.2986 S206s N210n TMT10 201 (R) SLLGRsLELnGAVEPSEGAPR (A) S(0.0)LLGRS(0.99)LELN(1.0)GAVEPS(0.0)EGAPR s:Phosphorylated S,n:Deamidated STRN4 82006 4 10 1137.1 173.35 HUMAN 1 3.1859 0.1294 VRSLSSRSPKSQDSY-p R4GMX8;S355-p VRSLSSRSPKSQDSY 0.285651453988116 0.175568134293142 -0.319666666666667 0.194 10.2683190078809 9.936228230974 -0.319666666666667 0.194 0.0940087112846208 0.101479233192447 -2.02836762649037 1.96984234580665 R4GMX8 RANBP10 R4GMX8.S355.p_RANBP10 R4GMX8_S355s _1_1_355_355 R4GMX8 R4GMX8|Q6VN20|A0A0D9SEU5|Q6VN20-3|Q6VN20-2 Ran-binding protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5496.5496.3 8.85 1.08 2.243 4 1 1 0 467.2623 1319.8047 S355s TMT10 350 (R) SLSSRsPK (S) S(0.0)LS(0.0)S(0.0)RS(0.99)PK K:TMT10,s:Phosphorylated S RANBP10 71282.8 3 9 1268.1 160.1 HUMAN 1 -10.2683 9.9362 VRSLSTYSAAALQSD-p A0A087X165;S473-p VRSLSTYSAAALQSD 0.576214180707572 0.490445693994919 0.108333333333333 0.0813333333333333 4.40443689248646 4.13653947618059 0.108333333333333 0.0813333333333334 0.3627073119338 0.385785635030299 0.99369078343391 0.94297715466071 A0A087X165 NotFound A0A087X165.S473.p_NotFound A0A087X165_S473s _1_1_473_473 A0A087X165 A0A087X165|Q9C0H9-5|Q9C0H9-2 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30919.30919.3 18.52 18.33 2.956 8 1 1 0 900.7866 2620.3758 S473s TMT10 468 (R) SLSTYsAAALQSDLEDSLYK (A) S(0.0)LS(0.0)T(0.0)Y(0.0)S(0.99)AAALQS(0.0)DLEDS(0.0)LY(0.0)K K:TMT10,s:Phosphorylated S SRCIN1 130745.5 1 14 98.1 603.22 HUMAN 1 4.4044 4.1365 VRSPAVQSPAKVQPL-p U3KQ54;S196-p VRSPAVQSPAKVQPL 0.202846697385928 0.000952253650599092 -0.21 -1.497 13.4304316920035 57.0050280665854 -0.21 -1.497 0.0453896496752294 1.99295362652055e-06 -2.5889254224144 -21.2188756879563 U3KQ54 PMF1-BGLAP U3KQ54.S196.p_PMF1-BGLAP U3KQ54_S196s _1_1_196_196 U3KQ54 U3KQ54|A0A087WT04 HCG2044777 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.7819.7819.2 12.35 12.35 2.743 2 1 1 0 711.8914 1342.8095 S196s TMT10 191 (R) SPAVQsPAK (V) S(0.0)PAVQS(0.99)PAK K:TMT10,s:Phosphorylated S PMF1-BGLAP 23996.7 4 2 4620.1 28.69 HUMAN 1 -13.4304 -57.005 VRSPLRTSLSSLRSE-p Q9BR39;S162-p VRSPLRTSLSSLRSE 0.415378196858476 0.188277658963683 -0.149666666666667 -0.322333333333333 7.03958158587994 9.53834772758357 -0.149666666666667 -0.322333333333333 0.197716011728699 0.111215476584398 -1.46793999645819 -1.9008757228155 Q9BR39 JPH2 Q9BR39.S162.p_JPH2 Q9BR39_S162s _1_1_162_162 Q9BR39 Q9BR39 Junctophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.11651.11651.2 9.21 9.21 1.312 4 1 1 0 536.7836 992.5938 S162s TMT10 161 (R) TsLSSLR (S) T(0.0)S(0.99)LS(0.0)S(0.0)LR s:Phosphorylated S JPH2 74448.4 1 2 1028.1 186.58 HUMAN 1 -7.0396 -9.5383 VRSPQGPSPVLAEDS-p Q99638;S380-p VRSPQGPSPVLAEDS 0.483994680222988 0.0394532304370001 0.101333333333333 0.252 5.80538537021979 18.8335831114513 0.101333333333333 0.252 0.262700840913309 0.0130810223851005 1.24981592242419 3.62982882027416 Q99638 RAD9A Q99638.S380.p_RAD9A Q99638_S375sS380s_2_2_375_380 Q99638 Q99638 Cell cycle checkpoint control protein RAD9A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.37106.37106.4 18.86 17.8 1.821 5 2 2 0 833.8976 3172.6364 S375s S380s TMT10 363 (R) SLFFGSILAPVRsPQGPsPVLAEDSEGEG (-) S(0.0)LFFGS(0.0)ILAPVRS(0.99)PQGPS(0.99)PVLAEDS(0.0)EGEG s:Phosphorylated S RAD9A 43117.2 11 8 1917.1 107.16 HUMAN 2 5.8054 18.8336 VRSQRPWSGAPETSH-p Q96P48;S1324-p VRSQRPWSGAPETSH 0.415666897037693 0.107345719291196 -0.113333333333333 -0.216 7.0346662673709 12.8004164901604 -0.113333333333333 -0.216 0.19793991218789 0.0524757133415806 -1.46708000513166 -2.47383202463802 Q96P48 ARAP1 Q96P48.S1324.p_ARAP1 Q96P48_S1324s _1_1_1324_1324 Q96P48 Q96P48|Q96P48-1|Q96P48-4 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.6449.6449.4 11.75 11.75 1.761 4 1 1 0 622.8165 2408.2835 S1324s TMT10 1319 (R) SQRPWsGAPETSHRPEK (E) S(0.0)QRPWS(0.99)GAPET(0.0)S(0.0)HRPEK K:TMT10,s:Phosphorylated S ARAP1 163843.1 2 3 3575.1 47.93 HUMAN 1 -7.0347 -12.8004 VRSQRVRSLLGLSNS-p Q13033-2;S202-p VRSQRVRSLLGLSNS 0.0691244016116837 0.00544603063293243 -0.512 -0.508333333333333 25.0063422379166 32.8519959745637 -0.512 -0.508333333333333 0.00315766298490351 0.000518561658335736 -5.04538325025327 -7.33591406867125 Q13033 STRN3 Q13033.2.S202.p_STRN3 Q13033-2_S202s _1_1_202_202 Q13033-2 Q13033|Q13033-2|G3V340 Isoform Alpha of Striatin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21159.21159.3 19.21 16.76 2.741 5 1 1 0 842.4523 2445.3713 S202s TMT10 200 (R) VRsLLGLSNSEPNGSVETK (N) VRS(0.99)LLGLS(0.0)NS(0.0)EPNGS(0.0)VET(0.0)K K:TMT10,s:Phosphorylated S STRN3 78142.7 4 3 1014.1 188.21 HUMAN 1 -25.0063 -32.852 VRTAQVPSPPRGKIS-p Q9UKV3;S1004-p VRTAQVPSPPRGKIS 0.37275294026204 0.0256214298289291 0.125666666666667 0.298 7.95142408096752 21.6511702470404 0.125666666666667 0.298 0.16027197618707 0.00683727385727607 1.62673282921952 4.23822299441821 Q9UKV3 ACIN1 Q9UKV3.S1004.p_ACIN1 Q9UKV3_S1004s _1_1_1004_1004 Q9UKV3 Q9UKV3|Q9UKV3-5|E7EQT4|S4R3H4|Q9UKV3-2|Q9UKV3-3 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19759.19759.4 18.96 17.05 4.742 5 1 1 0 626.0816 2421.3299 S1004s TMT10 987 (K) SGVSITIDDPVRTAQVPsPPR (G) S(0.0)GVS(0.0)IT(0.0)IDDPVRT(0.0)AQVPS(0.99)PPR s:Phosphorylated S ACIN1 152258.2 47 38 32.2 899.18 HUMAN 1 7.9514 21.6512 VRTDSVKTPESEGNP-p Q8WYK2-2;T159-p VRTDSVKTPESEGNP 0.259805946096148 0.0057354115382082 -0.176666666666667 -0.517333333333333 11.1025839887745 32.4479452056583 -0.176666666666667 -0.517333333333333 0.077578539829642 0.000569122138119843 -2.17409099201597 -7.20024707496849 Q8WYK2 JDP2 Q8WYK2.2.T159.p_JDP2 Q8WYK2-2_T159t _1_1_159_159 Q8WYK2-2 Q8WYK2-2 Isoform 2 of Jun dimerization protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23385.23385.5 18.97 18.97 1.13 4 1 1 0 668.5704 3258.8603 T159t TMT10 154 (R) TDSVKtPESEGNPLLEQLEKK (-) T(0.0)DS(0.0)VKT(0.99)PES(0.0)EGNPLLEQLEKK K:TMT10,t:Phosphorylated T JDP2 19896.7 6 1 4236.1 34.99 HUMAN 1 -11.1026 -32.4479 VRTLLQGSGCLAGIY-p Q15149;S3491-p VRTLLQGSGCLAGIY 0.950718113080104 0.223860333853112 -0.0123333333333333 0.120333333333333 0.43282127036468 8.56176372430722 -0.0123333333333334 0.120333333333333 0.905144408591577 0.139259113938096 -0.124856633169545 1.73191067042946 Q15149 PLEC Q15149.S3491.p_PLEC Q15149_S3491s _1_1_3491_3491 Q15149 Q15149|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.30171.30171.3 10.75 10.75 1.545 4 1 1 0 826.4265 2397.31 S3491s TMT10 3486 (R) TLLQGsGCLAGIYLEDTK (E) T(0.0)LLQGS(0.99)GCLAGIY(0.0)LEDT(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PLEC 533778 1 26 44.1 794.85 HUMAN 1 -0.4328 8.5618 VRTNSMGSATGPLPG-p O15014;S470-p VRTNSMGSATGPLPG 0.0201412825252344 0.00159168462790637 -0.793666666666667 -1.00433333333333 39.4959799553322 44.9171845375462 -0.793666666666667 -1.00433333333333 0.000112305753095098 3.22315763625739e-05 -9.92952090537189 -12.5806439077368 O15014 ZNF609 O15014.S470.p_ZNF609 O15014_S467sS470s_2_2_467_470 O15014 O15014 Zinc finger protein 609 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22522.22522.3 13.11 9.25 2.185 6 2 2 0 982.8216 2786.5123 S467s S470s TMT10 465 (R) TNsMGsATGPLPGTKVEPTVLDR (N) T(0.0)NS(0.99)MGS(0.99)AT(0.0)GPLPGT(0.0)KVEPT(0.0)VLDR K:TMT10,s:Phosphorylated S ZNF609 152443.5 5 32 63.1 699.07 HUMAN 1 -39.496 -44.9172 VRTPSQLSDNNCRQ_-p Q4G0F5;S330-p VRTPSQLSDNNCRQ_ 0.916145150674614 0.0199274763775543 -0.0246666666666667 -0.328 0.742118522360479 23.3148964204464 -0.0246666666666667 -0.328 0.842923472813045 0.00466133545188674 -0.207878905564195 -4.62399495849739 Q4G0F5 VPS26B Q4G0F5.S330.p_VPS26B Q4G0F5_S330s_1_1_330_330 Q4G0F5 Q4G0F5 Vacuolar protein sorting-associated protein 26B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.6479.6479.2 12.32 10.07 2.158 3 1 1 0 865.375 1648.791 S330s N332n TMT10 325 (R) TPSQLsDnNCRQ (-) T(0.0)PS(0.0)QLS(0.99)DN(0.99)N(0.0)CRQ C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated VPS26B 39268 3 5 3476.1 50.1 HUMAN 1 -0.7421 -23.3149 VRTVLPFSQEFQRDK-p Q7L576-2;S441-p VRTVLPFSQEFQRDK 0.770398746656441 0.183375994570221 -0.0493333333333333 -0.174 2.16976072757635 9.69037388640168 -0.0493333333333333 -0.174 0.606769758351108 0.107389695600822 -0.546076989681146 -1.92721211591615 Q7L576 CYFIP1 Q7L576.2.S441.p_CYFIP1 Q7L576-2_S441s _1_1_441_441 Q7L576-2 Q7L576|Q7L576-2|Q7L576-3 Isoform 2 of Cytoplasmic FMR1-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24641.24641.3 10.62 10.62 1.878 2 1 1 0 554.2815 1580.8634 S441s TMT10 436 (R) TVLPFsQEFQR (D) T(0.0)VLPFS(0.99)QEFQR s:Phosphorylated S CYFIP1 95720.1 2 4 2806.1 69.96 HUMAN 1 -2.1698 -9.6904 VRVCEPCYEQLNRKA-p O14964;Y216-p VRVCEPCYEQLNRKA 0.874041515701776 0.0930180814665246 -0.048 -0.282333333333333 1.14425439208157 13.6411514652186 -0.048 -0.282333333333333 0.768377361354442 0.043239917182616 -0.30968171792571 -2.62573980842074 O14964 HGS O14964.Y216.p_HGS O14964_Y216y _1_1_216_216 O14964 O14964|O14964-2 Hepatocyte growth factor-regulated tyrosine kinase substrate GG20160819_MSz_CCLE_T4D7_pY_Injection_02.12406.12444.2 15.92 9.19 99 1 1 1 0 888.884 1696.7984 Y216y TMT10 211 (R) VCEPCyEQLNR (K) VCEPCY(1.0)EQLNR C:Carbamidomethylation,y:Phosphorylated Y HGS 86761.1 2 1 119.1 25.6 HUMAN 1 -1.1443 -13.6412 VRVMNTHSDDSGDDD-p Q969R2;S284-p VRVMNTHSDDSGDDD 0.203454009826202 0.753734241175426 0.252666666666667 -0.069 13.4081547804879 1.69627040640876 0.252666666666667 -0.069 0.0456230716941329 0.676663824987985 2.58488093947116 -0.440388072415977 Q969R2 OSBP2 Q969R2.S284.p_OSBP2 Q969R2_S284sS287s_2_2_284_287 Q969R2 Q969R2|Q969R2-2|Q969R2-3|Q6ZN50 Oxysterol-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12408.12408.5 17.18 17.18 1.645 7 2 2 0 803.5685 3853.8754 S284s S287s TMT10 279 (R) VMNTHsDDsGDDDEATTPADKSELHHTLK (N) VMNT(0.0)HS(0.99)DDS(0.99)GDDDEAT(0.0)T(0.0)PADKS(0.0)ELHHT(0.0)LK K:TMT10,s:Phosphorylated S OSBP2 102233.9 3 4 3264.1 55.6 HUMAN 1 13.4082 -1.6963 VRVVEKCSPAEKAGL-p Q5T2W1;S42-p VRVVEKCSPAEKAGL 0.366375273578779 0.00951798723429863 -0.205333333333333 -0.427333333333333 8.09585512247986 28.5196447258371 -0.205333333333333 -0.427333333333333 0.155029550475308 0.00140616255041061 -1.65178493274293 -5.98518826146606 Q5T2W1 PDZK1 Q5T2W1.S42.p_PDZK1 Q5T2W1_S42s _1_1_42_42 Q5T2W1 Q5T2W1|Q5T2W1-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9504.9504.3 10.64 10.64 99 1 1 1 0 638.6838 1834.0711 S42s TMT10 37 (R) VVEKCsPAEK (A) VVEKCS(1.0)PAEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PDZK1 57413.6 4 1 1301.1 156.33 HUMAN 1 -8.0959 -28.5196 VRVWKVPSLEKVLEF-p Q9HCU5;S185-p VRVWKVPSLEKVLEF 0.741432182429417 0.421301509511435 0.0516666666666667 0.0846666666666667 2.46562045592262 4.9966547597949 0.0516666666666667 0.0846666666666667 0.566810588198787 0.316471440620975 0.609614845536487 1.10322218521945 Q9HCU5 PREB Q9HCU5.S185.p_PREB Q9HCU5_S185s _1_1_185_185 Q9HCU5 Q9HCU5|B5MC98 Prolactin regulatory element-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22796.22796.3 8.11 8.11 99 1 1 1 0 618.371 1773.1242 S185s TMT10 180 (R) VWKVPsLEK (V) VWKVPS(1.0)LEK K:TMT10,s:Phosphorylated S PREB 46037.9 1 1 7024.1 8.11 HUMAN 1 2.4656 4.9967 VRWKGYDSEDDTWEP-p Q9Y232-2;S34-p VRWKGYDSEDDTWEP 0.908176418012531 0.816507421468261 0.0173333333333333 0.0253333333333334 0.822945808881702 1.23213034268163 0.0173333333333333 0.0253333333333334 0.82738076298129 0.752986111204085 0.228856918180391 0.331099685333146 Q9Y232 CDYL Q9Y232.2.S34.p_CDYL Q9Y232-2_S34s_1_1_34_34 Q9Y232-2 Q9Y232|Q9Y232-2 Isoform 2 of Chromodomain Y-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22605.22605.4 20.35 20.35 1.608 4 1 1 0 927.6375 3626.5604 S34s N47n TMT10 31 (K) GYDsEDDTWEPEQHLVnCEEYIHDFNR (R) GY(0.0)DS(0.99)EDDT(0.0)WEPEQHLVN(0.99)CEEY(0.0)IHDFN(0.0)R C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated CDYL 61121.6 10 2 1110.1 176.05 HUMAN 1 0.8229 1.2321 VRYIKENSPCVTPVS-p Q08999;S413-p VRYIKENSPCVTPVS 0.807399255272832 0.0205007663178049 0.058 0.390333333333333 1.78595782628998 23.1096259284678 0.058 0.390333333333333 0.662833145253981 0.00488694450324135 0.460861215750659 4.57523499062575 Q08999 RBL2 Q08999.S413.p_RBL2 Q08999_S413s _1_1_413_413 Q08999 Q08999|Q08999-2 Retinoblastoma-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12245.12245.3 17.2 17.2 3.668 7 1 1 0 751.3578 2172.0916 S413s TMT10 411 (K) ENsPCVTPVSTATHSLSR (L) ENS(0.99)PCVT(0.0)PVS(0.0)T(0.0)AT(0.0)HS(0.0)LS(0.0)R C:Carbamidomethylation,s:Phosphorylated S RBL2 129790.7 1 4 408.1 323.79 HUMAN 1 1.786 23.1096 VSAGEPGSHPSPAPR-p A0A1B0GV68;S424-p VSAGEPGSHPSPAPR 0.893810515246054 0.499703516476031 -0.0476666666666667 0.08 0.952691083206365 4.0315541783874 -0.0476666666666667 0.08 0.803028375625278 0.395225158376419 -0.261969018578565 0.922999183764584 A0A1B0GV68 NotFound A0A1B0GV68.S424.p_NotFound A0A1B0GV68_S424sS427s_2_2_424_427 A0A1B0GV68 Q9Y4F1-2|C9JME2|A0A1B0GV68 FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7336.7336.3 8.83 8.83 8.827 3 2 2 0 612.2745 1674.8761 S424s S427s TMT10 417 (K) VSAGEPGsHPsPAPR (R) VS(0.0)AGEPGS(0.99)HPS(0.99)PAPR s:Phosphorylated S FARP1 88555.5 3 27 147.1 514.5 HUMAN 1 -0.9527 4.0316 VSAKNTRTIQRRDSF-p Q9H2G2;T183-p VSAKNTRTIQRRDSF 0.69342676446775 0.381478190871019 0.058 0.138666666666667 2.98292641716379 5.56004640333728 0.058 0.138666666666667 0.503161448018834 0.277968356733974 0.716942323515325 1.20550440848975 Q9H2G2 SLK Q9H2G2.T183.p_SLK Q9H2G2_T183t _1_1_183_183 Q9H2G2 Q9H2G2|Q9H2G2-2 STE20-like serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3461.3461.3 9.18 2.97 1.37 2 1 1 0 399.8817 1117.6639 T183t TMT10 180 (K) NTRtIQR (R) NT(0.0)RT(0.99)IQR t:Phosphorylated T SLK 143320 4 2 329.1 359.67 HUMAN 1 2.9829 5.56 VSAPAPMSPTRRRAL-p Q9BWG6;S183-p VSAPAPMSPTRRRAL 0.544463415002689 0.0827422874054142 -0.0803333333333334 -0.226333333333333 4.87582072887022 14.3321870381431 -0.0803333333333334 -0.226333333333333 0.325400283604579 0.036879183408048 -1.08125170632195 -2.75241638656818 Q9BWG6 SCNM1 Q9BWG6.S183.p_SCNM1 Q9BWG6_S183s _1_1_183_183 Q9BWG6 Q9BWG6|Q9BWG6-2 Sodium channel modifier 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14233.14233.3 25.5 25.5 1.767 6 1 1 0 1081.8572 3163.5891 S183s TMT10 158 (K) ISREPEPAAGPQAEESATVSAPAPMsPTR (R) IS(0.0)REPEPAAGPQAEES(0.0)AT(0.0)VS(0.0)APAPMS(0.99)PT(0.0)R s:Phosphorylated S SCNM1 26177.2 10 2 1939.1 106.1 HUMAN 1 -4.8758 -14.3322 VSAPGDDTESLHSQG-p Q12888-2;T1219-p VSAPGDDTESLHSQG 0.386191491797539 0.0348176205603099 0.117666666666667 0.356 7.64893913478705 19.6335450502094 0.117666666666667 0.356 0.171832807746711 0.0108804158636384 1.57419489129977 3.79727236786785 Q12888 TP53BP1 Q12888.2.T1219.p_TP53BP1 Q12888-2_T1219tS1221sS1224s_3_3_1219_1224 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.14272.14476.5 16.67 16.67 5.203 5 3 3 0 958.624 4549.1843 T1219t S1221s S1224s TMT10 1206 (R) GSGEKPVSAPGDDtEsLHsQGEEEFDMPQPPHGHVLHR (H) GS(0.0)GEKPVS(0.0)APGDDT(0.99)ES(0.99)LHS(0.99)QGEEEFDMPQPPHGHVLHR K:TMT10,t:Phosphorylated T,s:Phosphorylated S TP53BP1 216167.2 3 118 3.1 2297.07 HUMAN 1 7.6489 19.6335 VSAPLALSCPRQGGL-p Q9UGP4;S304-p VSAPLALSCPRQGGL 0.170325535786342 0.146339254233682 -0.219666666666667 -0.16 15.3437418857001 10.9928690821626 -0.219666666666667 -0.16 0.0292163401023221 0.0795633556899198 -2.94317232867082 -2.15388978604093 Q9UGP4 LIMD1 Q9UGP4.S304.p_LIMD1 Q9UGP4_S304s _1_1_304_304 Q9UGP4 Q9UGP4|C9JRJ5 LIM domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.19454.19454.3 12.86 12.86 3.424 4 1 1 0 588.9704 1684.9254 S304s TMT10 294 (R) TPSVSAPLALsCPR (Q) T(0.0)PS(0.0)VS(0.0)APLALS(0.99)CPR C:Carbamidomethylation,s:Phosphorylated S LIMD1 73900.6 1 7 1009.1 188.97 HUMAN 1 -15.3437 -10.9929 VSASRAKSAEAGIAG-p A0A087WYN9;S27-p VSASRAKSAEAGIAG 0.946134394492223 0.0447862805203519 0.0113333333333333 -0.311 0.473800027740705 18.0546654824113 0.0113333333333333 -0.311 0.89664389786391 0.0156506886482748 0.136124357044088 -3.47048489625021 A0A087WYN9 NotFound A0A087WYN9.S27.p_NotFound A0A087WYN9_S27s _1_1_27_27 A0A087WYN9 A0A087WYN9|Q7Z478 ATP-dependent RNA helicase DHX29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10892.10892.3 11.48 11.48 11.476 2 1 1 0 729.065 2105.2169 S27s TMT10 25 (R) AKsAEAGIAGEAQSK (K) AKS(0.99)AEAGIAGEAQS(0.0)K K:TMT10,s:Phosphorylated S DHX29 156372.9 1 2 2368.1 86.39 HUMAN 1 0.4738 -18.0547 VSCLRRNSDNRNPSA-p Q9ULD2;S740-p VSCLRRNSDNRNPSA 0.478270607126848 0.00337785760569656 0.134 1.10333333333333 5.89444455813903 36.9706213077981 0.134 1.10333333333333 0.257368590548987 0.000200880540952199 1.26573686849402 8.84878314136397 Q9ULD2 MTUS1 Q9ULD2.S740.p_MTUS1 Q9ULD2_S740s _1_1_740_740 Q9ULD2 Q9ULD2 Microtubule-associated tumor suppressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.3061.3061.3 8.36 5.55 6.827 2 1 1 0 570.9338 1630.8207 S740s TMT10 738 (R) RNsDNRNPSADR (A) RNS(0.99)DNRNPS(0.0)ADR s:Phosphorylated S MTUS1 142763.7 1 5 645.1 254.81 HUMAN 1 5.8944 36.9706 VSDAKVYTPSISKPL-p Q5VV42-2;T408-p VSDAKVYTPSISKPL 0.289480631969882 0.0022076340288515 -0.178666666666667 -0.913 10.1535195368623 41.2088140598374 -0.178666666666667 -0.913 0.0965268305301533 7.57039593729924e-05 -2.0083951229227 -10.6886609542785 Q5VV42 CDKAL1 Q5VV42.2.T408.p_CDKAL1 Q5VV42-2_T408t _1_1_408_408 Q5VV42-2 Q5VV42|Q5VV42-2 Isoform 2 of Threonylcarbamoyladenosine tRNA methylthiotransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18840.18840.4 10.21 10.21 1.167 4 1 1 0 518.5596 1991.2508 T408t TMT10 406 (K) VYtPSISKPLAK (G) VY(0.0)T(0.99)PS(0.0)IS(0.0)KPLAK K:TMT10,t:Phosphorylated T CDKAL1 55293.7 3 2 5021.1 23.8 HUMAN 1 -10.1535 -41.2088 VSDGVTKSPEKRSSL-p P11137;S1534-p VSDGVTKSPEKRSSL 0.128918631797654 0.00245347195567913 -0.419333333333333 -0.877666666666667 18.4317874907649 40.0157718784731 -0.419333333333333 -0.877666666666667 0.0143489872906506 9.96374977091336e-05 -3.55018395410879 -10.1384583776719 P11137 MAP2 P11137.S1534.p_MAP2 P11137_S1534s _1_1_1534_1534 P11137 P11137|P11137-3|P11137-2 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.9801.9801.5 13.88 11.84 2.718 3 1 1 0 478.0737 2306.3737 S1534s TMT10 1525 (K) DKVSDGVTKsPEK (R) DKVS(0.0)DGVT(0.0)KS(0.99)PEK K:TMT10,s:Phosphorylated S MAP2 199979.2 10 11 117.1 560.28 HUMAN 1 -18.4318 -40.0158 VSDIVPDSPFPGALG-p Q14694;S226-p VSDIVPDSPFPGALG 0.574777890570195 0.275541864135436 0.0996666666666667 0.110666666666667 4.42335236144969 7.37732964215815 0.0996666666666667 0.110666666666667 0.361130994487252 0.182922461054912 0.997237038817424 1.52646964284821 Q14694 USP10 Q14694.S226.p_USP10 Q14694_S211sS226s_2_2_211_226 Q14694 Q14694|Q14694-2|Q14694-3 Ubiquitin carboxyl-terminal hydrolase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.27415.27415.3 13.88 13.88 1.147 9 2 2 0 1170.8416 3350.5644 S211s S226s TMT10 208 (R) TCNsPQNSTDSVSDIVPDsPFPGALGSDTR (T) T(0.0)CNS(0.99)PQNS(0.0)T(0.0)DS(0.0)VS(0.0)DIVPDS(0.99)PFPGALGS(0.0)DT(0.0)R C:Carbamidomethylation,s:Phosphorylated S USP10 87759.8 5 18 358.1 346.34 HUMAN 1 4.4234 7.3773 VSDNEEDSYDEEIHD-p G3V1L9;S131-p VSDNEEDSYDEEIHD 0.782977884264828 0.00638262730764488 0.046 0.520333333333333 2.04259751782514 31.5760071300633 0.046 0.520333333333333 0.624798888421546 0.000695663611416286 0.518215035317208 6.91460703083256 G3V1L9 TJP1 G3V1L9.S131.p_TJP1 G3V1L9_S131s _1_1_131_131 G3V1L9 G3V1L9|Q07157|G5E9E7|A0A087X0K9|Q07157-2|H0YKB1 Tight junction protein 1 (Zona occludens 1), isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.16721.16926.4 28.78 25.23 2.322 4 1 1 0 918.918 3592.6877 S131s TMT10 112 (K) VQIPVSRPDPEPVSDNEEDsYDEEIHDPR (S) VQIPVS(0.0)RPDPEPVS(0.0)DNEEDS(0.99)Y(0.0)DEEIHDPR s:Phosphorylated S TJP1 197797.8 4 40 41.2 827.72 HUMAN 1 2.0426 31.576 VSDQELQSANASVDD-p P22314;S816-p VSDQELQSANASVDD 0.0271614528671907 0.00455061128120994 -0.685666666666667 -0.564 36.4364086124475 34.3428471071181 -0.685666666666667 -0.564 0.000227174268737739 0.000367887718184009 -8.65604265654681 -7.85539911996613 P22314 UBA1 P22314.S816.p_UBA1 P22314_S816s _1_1_816_816 P22314 P22314|P22314-2|Q5JRR6 Ubiquitin-like modifier-activating enzyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18687.18934.4 25.1 25.1 3.728 4 1 1 0 806.1555 3141.6428 S816s TMT10 807 (K) IHVSDQELQsANASVDDSRLEELK (A) IHVS(0.0)DQELQS(0.99)ANAS(0.0)VDDS(0.0)RLEELK K:TMT10,s:Phosphorylated S UBA1 118930.9 2 9 289.1 381.86 HUMAN 1 -36.4364 -34.3428 VSDSQPCSDEEACSE-p H3BM45;S890-p VSDSQPCSDEEACSE 0.350268977614123 0.244736568903008 0.147666666666667 0.115666666666667 8.46493676884273 8.05476001434162 0.147666666666667 0.115666666666667 0.14239879790654 0.156503479868643 1.71573492505261 1.6441338177299 H3BM45 ANKFN1 H3BM45.S890.p_ANKFN1 H3BM45_S890s _1_1_890_890 H3BM45 H3BM45 Ankyrin repeat and fibronectin type-III domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.24067.24067.4 22.21 22.21 1.163 11 1 1 0 1019.4249 3994.728 S890s TMT10 882 (K) TVSDSQPCsDEEACSEVFLPTNSDYDSSDALSPR (D) T(0.0)VS(0.0)DS(0.0)QPCS(0.99)DEEACS(0.0)EVFLPT(0.0)NS(0.0)DY(0.0)DS(0.0)S(0.0)DALS(0.0)PR C:Carbamidomethylation,s:Phosphorylated S ANKFN1 131209.3 1 2 3372.1 52.61 HUMAN 1 8.4649 8.0548 VSDTRRVSDIQWFRE-p Q15126;S113-p VSDTRRVSDIQWFRE 0.316960397495081 0.0478914296570612 -0.138 0.491333333333333 9.34464071695064 17.6527302817504 -0.138 0.491333333333333 0.116288274996427 0.0171682872806162 -1.86803997107321 3.38961468814142 Q15126 PMVK Q15126.S113.p_PMVK Q15126_S113s _1_1_113_113 Q15126 Q15126 Phosphomevalonate kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19636.19636.3 11.1 8.82 99 1 1 1 0 505.9272 1435.8007 S113s TMT10 111 (R) RVsDIQWFR (E) RVS(1.0)DIQWFR s:Phosphorylated S PMVK 22165.7 1 2 3707.1 44.82 HUMAN 1 -9.3446 17.6527 VSEDDRNSFTLKLED-p P34932;S647-p VSEDDRNSFTLKLED 0.786965652821659 0.050454433623152 -0.0406666666666667 0.264 2.00945199392435 17.3299100173652 -0.0406666666666667 0.264 0.629585620886702 0.0184930693486595 -0.510894235953568 3.32530295972186 P34932 HSPA4 P34932.S647.p_HSPA4 P34932_S647s _1_1_647_647 P34932 P34932|A0A087WYC1 Heat shock 70 kDa protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.19229.19229.3 13.66 8.55 1.907 3 1 1 0 699.3562 2016.0802 S647s TMT10 639 (K) FVSEDDRNsFTLK (L) FVS(0.0)EDDRNS(0.99)FT(0.0)LK K:TMT10,s:Phosphorylated S HSPA4 95185.1 8 17 549.1 274.67 HUMAN 1 -2.0095 17.3299 VSEEEAESKEGTNKD-p Q9H3N1;S253-p VSEEEAESKEGTNKD 0.142325066015487 0.0572217874961637 -0.762333333333333 -0.225666666666667 17.2979408270113 16.555491121739 -0.762333333333334 -0.225666666666667 0.0186297023991505 0.0221029829067328 -3.32154911645888 -3.17325111410133 Q9H3N1 TMX1 Q9H3N1.S253.p_TMX1 Q9H3N1_S247sS253s_2_2_247_253 Q9H3N1 Q9H3N1 Thioredoxin-related transmembrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11338.11338.4 14.52 14.52 2.44 3 2 2 0 1011.7206 3883.9226 S247s S253s TMT10 234 (K) KVEEEQEADEEDVsEEEAEsKEGTNK (D) KVEEEQEADEEDVS(0.99)EEEAES(0.99)KEGT(0.0)NK K:TMT10,s:Phosphorylated S TMX1 32190 1 6 695.1 242.17 HUMAN 1 -17.2979 -16.5555 VSEELDRTPPEVSKK-p Q15393;T1200-p VSEELDRTPPEVSKK 0.849610603687078 0.201907470481704 -0.0283333333333333 0.144666666666667 1.36986565072586 9.14155408691357 -0.0283333333333333 0.144666666666667 0.729480076418074 0.12185534716075 -0.364244375645981 1.83219898313779 Q15393 SF3B3 Q15393.T1200.p_SF3B3 Q15393_T1200t _1_1_1200_1200 Q15393 Q15393|Q15393-3 Splicing factor 3B subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14019.14229.3 12.54 7.8 4.407 3 1 1 0 746.7191 2158.1756 T1200t TMT10 1192 (K) NVSEELDRtPPEVSK (K) NVS(0.0)EELDRT(0.99)PPEVS(0.0)K K:TMT10,t:Phosphorylated T SF3B3 136658.9 2 4 4429.1 31.51 HUMAN 1 -1.3699 9.1416 VSEKTSESPSKPGEK-p P20810-6;S34-p VSEKTSESPSKPGEK 0.165550225714236 0.00143210512461058 0.252666666666667 -0.958333333333333 15.6234475930473 45.9230350641934 0.252666666666667 -0.958333333333333 0.0273939867078061 2.55679844545315e-05 2.99621764170289 -13.1455407899513 P20810 CAST P20810.6.S34.p_CAST P20810-6_S34s _1_1_34_34 P20810-6 P20810-6|P20810-7|P20810-10|P20810-5|A0A0C4DGB5|P20810-9 Isoform 6 of Calpastatin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6545.6545.2 12.54 9.86 1.703 4 1 1 0 957.5131 1834.0525 S34s TMT10 31 (K) TSEsPSKPGEK (K) T(0.0)S(0.0)ES(0.99)PS(0.0)KPGEK K:TMT10,s:Phosphorylated S CAST 85340.8 8 3 314.1 369.19 HUMAN 1 15.6234 -45.923 VSELSGGTGGDEEEE-p Q6UN15;T17-p VSELSGGTGGDEEEE 0.56314177400857 0.846851668954168 0.141 0.044 4.59265361775644 1.01460592544391 0.141 0.0440000000000001 0.347323875430885 0.79166128593439 1.02885111659316 0.277510780322332 Q6UN15 FIP1L1 Q6UN15.T17.p_FIP1L1 Q6UN15_S14sT17t_2_2_14_17 Q6UN15 A0A0B4J203|Q6UN15 Pre-mRNA 3'-end-processing factor FIP1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.32051.32051.4 19.87 19.87 1.91 5 2 2 0 1047.4788 4026.9762 S14s T17t TMT10 9 (R) LVSELsGGtGGDEEEEWLYGGPWDVHVHSDLAK (D) LVS(0.0)ELS(0.99)GGT(0.99)GGDEEEEWLY(0.0)GGPWDVHVHS(0.0)DLAK K:TMT10,s:Phosphorylated S,t:Phosphorylated T FIP1L1 66639.3 2 13 404.1 326.66 HUMAN 1 4.5927 1.0146 VSERLELSVLYKEYA-p F5GYJ8;S55-p VSERLELSVLYKEYA 0.597914133571036 0.0409457516256491 -0.134666666666667 0.431666666666667 4.12588308282155 18.5998821754172 -0.134666666666667 0.431666666666667 0.386733409297112 0.0138042171509169 -0.941117061200641 3.58164763666445 F5GYJ8 NotFound F5GYJ8.S55.p_NotFound F5GYJ8_S55s _1_1_55_55 F5GYJ8 F5GYJ8|F5H6Q1|J3KR44|Q96FW1|F5GYN4 Ubiquitin thioesterase OTUB1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.29832.29832.3 7.37 4.99 4.621 2 1 1 0 501.6263 1422.8972 S55s TMT10 52 (R) LELsVLYK (E) LELS(0.99)VLY(0.0)K K:TMT10,s:Phosphorylated S OTUB1 32986.6 2 2 1845.1 111.38 HUMAN 1 -4.1259 18.5999 VSETGGNSPSDKVDN-p Q2KHR3;S1211-p VSETGGNSPSDKVDN 0.763769448219998 0.0521224861783809 -0.043 -0.239 2.2446588790455 17.1193606648758 -0.043 -0.239 0.596395162450357 0.01941171621001 -0.562326763366135 -3.28365688848757 Q2KHR3 QSER1 Q2KHR3.S1211.p_QSER1 Q2KHR3_S1211s _1_1_1211_1211 Q2KHR3 Q2KHR3|Q2KHR3-2 Glutamine and serine-rich protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25033.25033.5 20.69 20.69 1.466 10 1 1 0 959.1039 4711.531 S1211s TMT10 1186 (R) TFCPPPLPKPSSTTPTPLVSETGGNsPSDKVDNELK (N) T(0.0)FCPPPLPKPS(0.0)S(0.0)T(0.0)T(0.0)PT(0.0)PLVS(0.0)ET(0.0)GGNS(0.99)PS(0.0)DKVDNELK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S QSER1 190710.4 8 6 748.1 232.52 HUMAN 1 -2.2447 -17.1194 VSFDDPPSAKAAIDW-p Q92804;S295-p VSFDDPPSAKAAIDW 0.0644974559493023 0.0228525896888757 -0.405 -0.534 25.7473565859617 22.4026820157314 -0.405 -0.534 0.00266234505250116 0.00575084680114943 -5.23558375167191 -4.40985115942196 Q92804 TAF15 Q92804.S295.p_TAF15 Q92804_S295s _1_1_295_295 Q92804 Q92804|Q92804-2|A0A075B7D9 TATA-binding protein-associated factor 2N HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13587.13587.4 18.68 15.61 12.258 4 1 1 0 761.66 2963.6496 S295s TMT10 278 (K) DTGKPKGEATVSFDDPPsAK (A) DT(0.0)GKPKGEAT(0.0)VS(0.0)FDDPPS(0.99)AK K:TMT10,s:Phosphorylated S TAF15 62057.1 1 3 1461.1 140.26 HUMAN 1 -25.7474 -22.4027 VSFPRSGTQSDKVTL-p Q00341;T842-p VSFPRSGTQSDKVTL 0.567456906616859 0.225771173102728 0.162666666666667 -0.168666666666667 4.53059098699229 8.5129454823951 0.162666666666667 -0.168666666666667 0.352322923752919 0.140833331126422 1.01728792826888 -1.72346452894584 Q00341 HDLBP Q00341.T842.p_HDLBP Q00341_T842t _1_1_842_842 Q00341 Q00341|A0A024R4E5|Q00341-2 Vigilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.11583.11583.4 8.83 8.83 2.05 4 1 1 0 483.5272 1851.1154 T842t TMT10 840 (R) SGtQSDKVTLK (G) S(0.0)GT(0.99)QS(0.0)DKVT(0.0)LK K:TMT10,t:Phosphorylated T HDLBP 142080.7 2 6 775.1 227.26 HUMAN 1 4.5306 -8.5129 VSFWTQDSDENEQEQ-p O14974;S862-p VSFWTQDSDENEQEQ 0.446807749322286 0.011831190253862 -0.154333333333333 0.465 6.45529483695254 26.9321988096185 -0.154333333333333 0.465 0.226188497808756 0.0020266563744976 -1.36528641193281 5.54275958812215 O14974 PPP1R12A O14974.S862.p_PPP1R12A O14974_S862s _1_1_862_862 O14974 O14974|O14974-2|O14974-3|O14974-4 Protein phosphatase 1 regulatory subunit 12A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16134.16134.4 26.34 26.34 5.047 12 1 1 0 1269.5853 4995.3455 S862s TMT10 852 (R) STGVSFWTQDsDENEQEQQSDTEEGSNKKETQTDSISR (Y) S(0.0)T(0.0)GVS(0.0)FWT(0.0)QDS(0.99)DENEQEQQS(0.0)DT(0.0)EEGS(0.0)NKKET(0.0)QT(0.0)DS(0.0)IS(0.0)R K:TMT10,s:Phosphorylated S PPP1R12A 115678 13 10 286.1 385.3 HUMAN 1 -6.4553 26.9322 VSGFDFDSPTSSKKK-p Q96DR7;S329-p VSGFDFDSPTSSKKK 0.694179655380018 0.0254632818083576 0.0623333333333333 -0.345666666666667 2.97423062225548 21.6925250335354 0.0623333333333333 -0.345666666666667 0.504169927804712 0.00677247634263653 0.715173370629224 -4.24755863700573 Q96DR7 ARHGEF26 Q96DR7.S329.p_ARHGEF26 Q96DR7_S329s _1_1_329_329 Q96DR7 Q96DR7|Q96DR7-4|Q96DR7-3 Rho guanine nucleotide exchange factor 26 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23572.23572.3 17.43 17.43 3.79 5 1 1 0 694.6777 2002.0533 S329s TMT10 320 (R) AVVSGFDFDsPTSSK (K) AVVS(0.0)GFDFDS(0.99)PT(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ARHGEF26 97914.4 2 10 478.1 300.31 HUMAN 1 2.9742 -21.6925 VSGITLLSPKHKYKS-p Q9P2B7;S218-p VSGITLLSPKHKYKS 0.736579803240874 0.00390982039273504 -0.065 -0.681666666666667 2.5171531025885 35.5254574283458 -0.065 -0.681666666666667 0.560124655408647 0.000280191048994538 -0.620510526737832 -8.289678218751 Q9P2B7 CFAP97 Q9P2B7.S218.p_CFAP97 Q9P2B7_S218s _1_1_218_218 Q9P2B7 Q9P2B7|Q9P2B7-2 Cilia- and flagella-associated protein 97 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18615.18615.3 15.69 15.69 4.092 3 1 1 0 563.9955 1610.0041 S218s TMT10 210 (K) HVSGITLLsPK (H) HVS(0.0)GIT(0.0)LLS(0.99)PK K:TMT10,s:Phosphorylated S CFAP97 59816.4 3 1 2623.1 76.55 HUMAN 1 -2.5172 -35.5255 VSGQLIDSMANSFVG-p P36507;S222-p VSGQLIDSMANSFVG 0.82242509118488 0.898390292501995 -0.044 -0.0153333333333333 1.63346968083745 0.652596676477844 -0.044 -0.0153333333333333 0.686519744077952 0.860479111986908 -0.426009273039628 -0.184294693562457 P36507 MAP2K2 P36507.S222.p_MAP2K2 P36507_S222s _1_1_222_222 P36507 A0A1B0GUL7|P36507|Q02750|Q02750-2|G5E9C7|H3BRW9 Dual specificity mitogen-activated protein kinase kinase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35605.35605.3 23.08 23.08 5.238 4 1 1 0 895.087 2603.2795 S222s TMT10 210 (K) LCDFGVSGQLIDsMANSFVGTR (S) LCDFGVS(0.0)GQLIDS(0.99)MANS(0.0)FVGT(0.0)R C:Carbamidomethylation,s:Phosphorylated S MAP2K2 44708.6 17 3 1640.1 124.72 HUMAN 1 -1.6335 -0.6526 VSGRLMGSPPVPGPS-p Q9NVF7;S235-p VSGRLMGSPPVPGPS 0.390513422575628 0.0136706666678471 -0.122333333333333 -0.389666666666667 7.54726044427619 25.9017767097248 -0.122333333333333 -0.389666666666667 0.175903287257872 0.00256934444241181 -1.55650832759666 -5.26896736744551 Q9NVF7 FBXO28 Q9NVF7.S235.p_FBXO28 Q9NVF7_S235s _1_1_235_235 Q9NVF7 Q9NVF7 F-box only protein 28 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.37245.37245.3 18.57 18.57 5.572 5 1 1 0 923.4895 2688.4869 S235s TMT10 232 (R) LMGsPPVPGPSAALTTMQLFSK (Q) LMGS(0.99)PPVPGPS(0.0)AALT(0.0)T(0.0)MQLFS(0.0)K K:TMT10,s:Phosphorylated S FBXO28 41433.7 4 1 1206.1 166.81 HUMAN 1 -7.5473 -25.9018 VSGRYRGSVHFGLVR-p Q9C0C9;S73-p VSGRYRGSVHFGLVR 0.0298276037056229 0.0179869767242454 -0.631 -0.35 35.637488701518 24.0322586274823 -0.631 -0.35 0.000273055626466255 0.00395161055921144 -8.34845552105397 -4.79709222844346 Q9C0C9 UBE2O Q9C0C9.S73.p_UBE2O Q9C0C9_S73s _1_1_73_73 Q9C0C9 Q9C0C9 (E3-independent) E2 ubiquitin-conjugating enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.12911.12911.3 9.51 9.51 9.513 2 1 1 0 533.9507 1519.8695 S73s TMT10 70 (R) YRGsVHFGLVR (L) Y(0.0)RGS(0.99)VHFGLVR s:Phosphorylated S UBE2O 142717.3 2 2 308.1 373.27 HUMAN 1 -35.6375 -24.0323 VSGTPQASPMIERSN-p Q9UHR4;S261-p VSGTPQASPMIERSN 0.553712597480183 0.0413984613999749 0.156333333333333 -0.258 4.73956546191722 18.5414198633404 0.156333333333333 -0.258 0.335771208516924 0.0139912982241956 1.05610851627678 -3.56964530103919 Q9UHR4 BAIAP2L1 Q9UHR4.S261.p_BAIAP2L1 Q9UHR4_S261s _1_1_261_261 Q9UHR4 Q9UHR4 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14351.14351.3 21.78 20.72 4.629 6 1 1 0 746.0348 2156.1219 S261s TMT10 248 (K) TPASTPVSGTPQAsPMIER (S) T(0.0)PAS(0.0)T(0.0)PVS(0.0)GT(0.0)PQAS(0.99)PMIER s:Phosphorylated S BAIAP2L1 57224 6 5 661.1 251.53 HUMAN 1 4.7396 -18.5414 VSGVPRLSPKTHRPR-p Q99700;S684-p VSGVPRLSPKTHRPR 0.384233087831137 0.602714778796745 0.126 -0.0493333333333333 7.69171899783511 2.98249630674943 0.126 -0.0493333333333333 0.17014849037529 0.503211281876912 1.58163197675301 -0.716754591466547 Q99700 ATXN2 Q99700.S684.p_ATXN2 Q99700_S684s _1_1_684_684 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22740.22740.3 17.33 10.91 1.852 8 1 1 0 875.4677 2544.4186 S684s TMT10 666 (R) TSPSGGTWSSVVSGVPRLsPK (T) T(0.0)S(0.0)PS(0.0)GGT(0.0)WS(0.0)S(0.0)VVS(0.0)GVPRLS(0.99)PK K:TMT10,s:Phosphorylated S ATXN2 140907.9 3 10 176.1 481.52 HUMAN 1 7.6917 -2.9825 VSHHEPESPQLRYLP-p Q9Y6D6;S243-p VSHHEPESPQLRYLP 0.253422222265936 0.0264240436841926 0.220333333333333 0.459333333333333 11.3647463740731 21.4282676786993 0.220333333333333 0.459333333333333 0.0730340463166185 0.00719736010291899 2.22013766135559 4.18811773560491 Q9Y6D6 ARFGEF1 Q9Y6D6.S243.p_ARFGEF1 Q9Y6D6_S243s _1_1_243_243 Q9Y6D6 Q9Y6D6 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6716.6716.5 18.61 18.61 1.235 3 1 1 0 561.2824 2722.4123 S243s TMT10 227 (R) QHHHLLQSPVSHHEPEsPQLR (Y) QHHHLLQS(0.0)PVS(0.0)HHEPES(0.99)PQLR s:Phosphorylated S ARFGEF1 210988.4 1 2 381.1 335.01 HUMAN 1 11.3647 21.4283 VSKDGLLSPGAWNGE-p Q9BR39;S508-p VSKDGLLSPGAWNGE 0.228823878883514 0.111959558647563 0.177666666666667 -0.206 12.307219469529 12.5510688919258 0.177666666666667 -0.206 0.0587865607617684 0.0555767454137973 2.38694829232419 -2.42919966445055 Q9BR39 JPH2 Q9BR39.S508.p_JPH2 Q9BR39_S508s _1_1_508_508 Q9BR39 Q9BR39 Junctophilin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.22254.22254.3 17.36 17.36 8.273 3 1 1 0 732.3379 2115.0304 S508s TMT10 504 (K) DGLLsPGAWNGEPSGEGSR (S) DGLLS(0.99)PGAWNGEPS(0.0)GEGS(0.0)R s:Phosphorylated S JPH2 74448.4 1 7 1028.1 186.58 HUMAN 1 12.3072 -12.5511 VSKESVASMGADSGD-p Q92805;S36-p VSKESVASMGADSGD 0.820972063521139 0.525489028004964 0.035 0.107666666666667 1.64715545334114 3.75335407204744 0.035 0.107666666666667 0.684359743197361 0.421370951417023 0.429162311062098 0.869538575632347 Q92805 GOLGA1 Q92805.S36.p_GOLGA1 Q92805_S36s _1_1_36_36 Q92805 Q92805 Golgin subfamily A member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21684.21684.4 19.28 19.28 2.596 9 1 1 0 872.1349 3405.555 S36s TMT10 32 (K) ESVAsMGADSGDDFASDGSSSREDLSSQLLR (R) ES(0.0)VAS(0.99)MGADS(0.0)GDDFAS(0.0)DGS(0.0)S(0.0)S(0.0)REDLS(0.0)S(0.0)QLLR s:Phosphorylated S GOLGA1 88297 1 2 1691.1 120.73 HUMAN 1 1.6472 3.7534 VSKHKSESPCESPYP-p Q8NI27;S1516-p VSKHKSESPCESPYP 0.373737854391693 0.0226193350033276 0.123666666666667 0.353333333333333 7.9188270296155 22.4723689275535 0.123666666666667 0.353333333333333 0.161479463202342 0.00565930509134819 1.62107604480249 4.4259815938271 Q8NI27 THOC2 Q8NI27.S1516.p_THOC2 Q8NI27_S1516s _1_1_1516_1516 Q8NI27 Q8NI27|A0A0C4DG98|Q8NI27-2 THO complex subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6789.6789.3 15.96 15.96 1.186 4 1 1 0 852.7499 2476.2745 S1516s TMT10 1512 (K) HKSEsPCESPYPNEK (D) HKS(0.0)ES(0.99)PCES(0.0)PY(0.0)PNEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S THOC2 184654.1 6 15 512.1 287.1 HUMAN 1 7.9188 22.4724 VSKKELNSNHDGADE-p Q01105-2;S15-p VSKKELNSNHDGADE 0.176409109456939 0.102764403414831 -0.379333333333333 0.210333333333333 14.9617918575956 13.0522193814184 -0.379333333333333 0.210333333333333 0.0319022132864454 0.0495197064855102 -2.87128827016046 2.51909207539569 Q01105 SET Q01105.2.S15.p_SET Q01105-2_S15s _1_1_15_15 Q01105-2 Q01105-2 Isoform 2 of Protein SET HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6976.6976.3 16.94 16.94 8.17 3 1 1 0 728.6677 2104.0195 S15s TMT10 12 (K) ELNsNHDGADETSEK (E) ELNS(0.99)NHDGADET(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S SET 32102.4 8 3 1479.1 138.77 HUMAN 1 -14.9618 13.0522 VSKQRQNSIRTNAIT-p P57735;S184-p VSKQRQNSIRTNAIT 0.419598745385739 0.398963961324055 0.406333333333333 0.149666666666667 6.96488829956616 5.30628140655107 0.406333333333333 0.149666666666667 0.201145893220983 0.294694383850375 1.4548656851703 1.15965455387665 P57735 RAB25 P57735.S184.p_RAB25 P57735_S184s _1_1_184_184 P57735 P57735 Ras-related protein Rab-25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13404.13404.4 15.91 11.67 2.573 4 1 1 0 805.4189 3138.702 S184s TMT10 182 (R) QNsIRTNAITLGSAQAGQEPGPGEKR (A) QNS(0.99)IRT(0.0)NAIT(0.0)LGS(0.0)AQAGQEPGPGEKR K:TMT10,s:Phosphorylated S RAB25 23609.3 1 1 2989.2 63.94 HUMAN 1 6.9649 5.3063 VSKSLSSSLDDTEVK-p O95292;S160-p VSKSLSSSLDDTEVK 0.690876146757438 0.705405308328847 -0.0763333333333334 0.045 3.01140085346959 2.08199802223581 -0.0763333333333334 0.045 0.499873270631589 0.619156159555691 -0.722726990364188 0.526823376716902 O95292 VAPB O95292.S160.p_VAPB O95292_S160s _1_1_160_160 O95292 O95292 Vesicle-associated membrane protein-associated protein B/C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.14609.14609.2 15.76 15.76 1.143 5 1 1 0 1088.5892 2096.2054 S160s TMT10 156 (K) SLSSsLDDTEVKK (V) S(0.0)LS(0.0)S(0.0)S(0.99)LDDT(0.0)EVKK K:TMT10,s:Phosphorylated S VAPB 27456.1 6 6 1400.1 146.44 HUMAN 1 -3.0114 2.082 VSKSQPVTPEKHRAR-p P54274;T371-p VSKSQPVTPEKHRAR 0.273785515653028 0.00165401543705715 -0.189333333333333 -1.05733333333333 10.6549002145906 44.2410896143568 -0.189333333333333 -1.05733333333333 0.0860022826924397 3.76609298501395e-05 -2.09575493337088 -12.2138966859002 P54274 TERF1 P54274.T371.p_TERF1 P54274_T371t _1_1_371_371 P54274 P54274 Telomeric repeat-binding factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.7691.7691.3 13.29 10.26 5.42 2 1 1 0 475.2582 1343.7935 T371t TMT10 367 (K) SQPVtPEK (H) S(0.0)QPVT(0.99)PEK K:TMT10,t:Phosphorylated T TERF1 50701.1 2 2 3678.1 45.5 HUMAN 1 -10.6549 -44.2411 VSKTAELSPKNLLSP-p Q86UP3-5;S2763-p VSKTAELSPKNLLSP 0.747076037726472 0.924159363969877 -0.0516666666666667 0.00966666666666668 2.40417738912018 0.482857722213704 -0.0516666666666667 0.00966666666666668 0.574886699636969 0.894775796028099 -0.596559663866528 0.138590371480689 Q86UP3 ZFHX4 Q86UP3.5.S2763.p_ZFHX4 Q86UP3-5_S2763s _1_1_2763_2763 Q86UP3-5 Q86UP3-5|Q86UP3-2|E7EVZ1|Q86UP3-4 Isoform 5 of Zinc finger homeobox protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10097.10097.2 9.48 4.39 4.13 2 1 1 0 642.3538 1203.7349 S2763s TMT10 2759 (K) TAELsPK (N) T(0.0)AELS(0.99)PK K:TMT10,s:Phosphorylated S ZFHX4 403634.9 1 4 3432.1 51.21 HUMAN 1 -2.4042 0.4829 VSKTMELSPRTLLSP-p Q15911;S2795-p VSKTMELSPRTLLSP 0.778996094549543 0.0622997837579997 -0.0673333333333333 -0.235 2.0840514653804 16.0440332362166 -0.0673333333333333 -0.235 0.618863477631857 0.0248654702188547 -0.527336416627189 -3.07446987253057 Q15911 ZFHX3 Q15911.S2795.p_ZFHX3 Q15911_S2795s _1_1_2795_2795 Q15911 Q15911|Q15911-2 Zinc finger homeobox protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10781.10781.2 8.87 4 4.896 2 1 1 0 571.7778 1062.5815 S2795s TMT10 2791 (K) TMELsPR (T) T(0.0)MELS(0.99)PR s:Phosphorylated S ZFHX3 409090.1 2 11 529.1 281.73 HUMAN 1 -2.0841 -16.044 VSKVMIGSPKKV___-p Q68CZ2;S1441-p VSKVMIGSPKKV___ 0.872036099278236 0.00929032313415506 -0.025 -0.467 1.16426051554333 28.6938197696891 -0.025 -0.467 0.764845909644918 0.00135088389157842 -0.314588664279791 -6.03532911389524 Q68CZ2 TNS3 Q68CZ2.S1441.p_TNS3 Q68CZ2_S1441s _1_1_1441_1441 Q68CZ2 Q68CZ2|Q68CZ2-2 Tensin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16064.16064.2 10.47 5.02 99 1 1 1 0 635.355 1189.7379 S1441s TMT10 1437 (K) VMIGsPK (K) VMIGS(1.0)PK K:TMT10,s:Phosphorylated S TNS3 156460.9 5 26 183.1 477.16 HUMAN 1 -1.1643 -28.6938 VSLAERGSFGAMDDP-p Q9UBC2-2;S593-p VSLAERGSFGAMDDP 0.180325945197864 0.237264631258917 -0.208 -0.138 14.6756339879193 8.22888346371015 -0.208 -0.138 0.0340750578020704 0.150352846151714 -2.81783454199602 -1.67429738483349 Q9UBC2 EPS15L1 Q9UBC2.2.S593.p_EPS15L1 Q9UBC2-2_S593s _1_1_593_593 Q9UBC2-2 Q9UBC2-2|Q9UBC2-3 Isoform 2 of Epidermal growth factor receptor substrate 15-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24256.24256.3 12.54 10.33 99 1 1 1 0 570.606 1629.8347 S593s TMT10 592 (R) GsFGAMDDPFK (N) GS(1.0)FGAMDDPFK K:TMT10,s:Phosphorylated S EPS15L1 99718.3 5 12 109.1 576.24 HUMAN 1 -14.6756 -8.2289 VSLGSAQSPPLSPLA-p Q9C0D6;S660-p VSLGSAQSPPLSPLA 0.155799546685798 0.676048027995285 -0.238 -0.041 16.2296638218826 2.32273658039749 -0.238 -0.041 0.0238250388677725 0.585768942932195 -3.11241324839861 -0.579073411124201 Q9C0D6 FHDC1 Q9C0D6.S660.p_FHDC1 Q9C0D6_S660s _1_1_660_660 Q9C0D6 Q9C0D6 FH2 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32818.32818.4 20.3 16.57 1.737 6 1 1 0 713.1431 2769.5803 S660s TMT10 649 (R) YSEPVSLGSAQsPPLSPLALGIK (E) Y(0.0)S(0.0)EPVS(0.0)LGS(0.0)AQS(0.99)PPLS(0.0)PLALGIK K:TMT10,s:Phosphorylated S FHDC1 125729.4 4 2 2652.1 75.2 HUMAN 1 -16.2297 -2.3227 VSLKVSESVIDVKTT-p P82094-2;S199-p VSLKVSESVIDVKTT 0.582849044638515 0.528325994179065 0.079 -0.0826666666666667 4.3130967090057 3.72546521101156 0.079 -0.0826666666666667 0.370416504476917 0.424085553944226 0.976524888926047 -0.8641351394998 P82094 TMF1 P82094.2.S199.p_TMF1 P82094-2_S199s _1_1_199_199 P82094-2 P82094-2|F8WF45 Isoform 2 of TATA element modulatory factor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18958.18958.2 12.48 7.67 2.504 2 1 1 0 757.4175 1433.8616 S199s TMT10 196 (K) VSEsVIDVK (T) VS(0.0)ES(0.99)VIDVK K:TMT10,s:Phosphorylated S TMF1 123666.4 1 7 393.1 331.84 HUMAN 1 4.3131 -3.7255 VSLLTAASPTIALLL-p A0A0G2JPP5;S939-p VSLLTAASPTIALLL 0.913243271805206 0.774651822389097 0.019 -0.0313333333333333 0.768451323105341 1.53371920265819 0.019 -0.0313333333333333 0.837827995003284 0.702470481911791 0.214743917780547 -0.402829219396016 A0A0G2JPP5 SCRIB A0A0G2JPP5.S939.p_SCRIB A0A0G2JPP5_S939s _1_1_939_939 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2|A0A0G2JMS7 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30569.30569.4 21.1 21.1 1.259 4 1 1 0 635.0983 2457.4027 S939s TMT10 928 (R) HDHAVSLLTAAsPTIALLLER (E) HDHAVS(0.0)LLT(0.0)AAS(0.99)PT(0.0)IALLLER s:Phosphorylated S SCRIB 178690.9 2 23 22.1 1004.81 HUMAN 1 0.7685 -1.5337 VSLNPCNTPQKIFTT-p P49454;T144-p VSLNPCNTPQKIFTT 0.721998321276909 0.0339566328439142 0.05 -0.404 2.67633153224218 19.8011523496559 0.05 -0.404 0.539966537462961 0.0104685074158545 0.653868329495505 -3.83286374978194 P49454 CENPF P49454.T144.p_CENPF P49454_T144t _1_1_144_144 P49454 P49454 Centromere protein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12722.12722.3 26.48 26.48 4.597 4 1 1 0 894.7712 2602.3295 T144t TMT10 128 (R) SQQAAQSADVSLNPCNtPQK (I) S(0.0)QQAAQS(0.0)ADVS(0.0)LNPCNT(0.99)PQK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T CENPF 371067.2 2 2 47.1 771.73 HUMAN 1 2.6763 -19.8012 VSLRSDGSENLCTPQ-p E7ETA6;S872-p VSLRSDGSENLCTPQ 0.432950797854438 0.951324356842303 0.113 0.00800000000000003 6.69644614541455 0.310251620796129 0.113 0.00800000000000001 0.213971231113397 0.931053930661302 1.40776592985519 0.0906123959922214 E7ETA6 PCM1 E7ETA6.S872.p_PCM1 E7ETA6_S872s _1_1_872_872 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14336.14336.4 20.27 20.27 1.459 7 1 1 0 881.6824 3443.7499 S872s TMT10 853 (R) RQGLAETASPVAVSLRSDGsENLCTPQQSR (T) RQGLAET(0.0)AS(0.0)PVAVS(0.0)LRS(0.0)DGS(0.99)ENLCT(0.0)PQQS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PCM1 229381.8 6 27 13.1 1159.95 HUMAN 1 6.6964 0.3103 VSLSKASSFADMMGI-p Q9H019;S238-p VSLSKASSFADMMGI 0.51433485998449 0.0616669239747438 0.088 0.219666666666667 5.33045346747047 16.1086198158463 0.088 0.219666666666667 0.29305872327595 0.0244984167573725 1.16428539754794 3.08687474202003 Q9H019 MTFR1L Q9H019.S238.p_MTFR1L Q9H019_S238s _1_1_238_238 Q9H019 Q9H019|Q9H019-3|E9PLD2 Mitochondrial fission regulator 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.32390.32804.2 16.46 12.05 1.195 2 1 1 0 904.9568 1728.9429 S238s TMT10 236 (K) ASsFADMMGILK (D) AS(0.0)S(0.99)FADMMGILK K:TMT10,s:Phosphorylated S MTFR1L 32413.3 32 5 1618.1 127.17 HUMAN 1 5.3305 16.1086 VSLSKSVSIQNITGV-p Q12802-2;S1910-p VSLSKSVSIQNITGV 0.199306780118349 0.194614737251053 0.245333333333333 0.166333333333333 13.6329653436678 9.3467780873734 0.241165630442834 0.166333333333333 0.0433214980092313 0.116231058066914 2.62577389119448 1.8677098184583 Q12802 AKAP13 Q12802.2.S1910.p_AKAP13 Q12802-2_S1910s _1_1_1910_1910 Q12802-2 Q12802-2|Q12802-4|A8MYJ1|A0A087WTD7 Isoform 2 of A-kinase anchor protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24974.24974.3 18.42 18.42 1.147 5 1 1 0 944.7935 2752.3976 S1910s TMT10 1908 (K) SVsIQNITGVGNDENMSNTWK (F) S(0.0)VS(0.99)IQNIT(0.0)GVGNDENMS(0.0)NT(0.0)WK K:TMT10,s:Phosphorylated S AKAP13 310921 2 16 66.1 683.25 HUMAN 1 13.633 9.3468 VSLSRAPSAPPGTGA-p Q9H1B7;S519-p VSLSRAPSAPPGTGA 0.331071537910901 0.327714271847436 0.157333333333333 0.0946666666666667 8.9703303838981 6.4151083287649 0.157333333333333 0.0946666666666667 0.126755543455318 0.228291197988024 1.80322678295055 1.35784599254278 Q9H1B7 IRF2BPL Q9H1B7.S519.p_IRF2BPL Q9H1B7_S519s _1_1_519_519 Q9H1B7 Q9H1B7 Interferon regulatory factor 2-binding protein-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.14207.14410.3 16.41 14.91 1.747 3 1 1 0 661.0102 1901.0442 S519s TMT10 517 (R) APsAPPGTGALPPAAPSGR (G) APS(0.99)APPGT(0.0)GALPPAAPS(0.0)GR s:Phosphorylated S IRF2BPL 83627.3 5 7 282.1 386.92 HUMAN 1 8.9703 6.4151 VSMLSLNTPNSNRKR-p Q9H8V3;T373-p VSMLSLNTPNSNRKR 0.237133599542224 0.00666530425695377 -0.239333333333333 -0.538666666666667 11.9764533982782 31.2641971232794 -0.239333333333333 -0.538666666666667 0.063438756301075 0.000747446801309289 -2.32815877073134 -6.81476648883717 Q9H8V3 ECT2 Q9H8V3.T373.p_ECT2 Q9H8V3_T373t _1_1_373_373 Q9H8V3 Q9H8V3|Q9H8V3-4|Q9H8V3-2 Protein ECT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18904.18904.3 16.1 16.1 2.036 5 1 1 0 610.3021 1748.9162 T373t TMT10 365 (K) SVSMLSLNtPNSNR (K) S(0.0)VS(0.0)MLS(0.0)LNT(0.99)PNS(0.0)NR t:Phosphorylated T ECT2 104530 4 7 572.1 269.2 HUMAN 1 -11.9765 -31.2642 VSNDAAQSDDEEKLQ-p Q5JSH3;S403-p VSNDAAQSDDEEKLQ 0.883932229691516 0.0189342040006697 -0.0406666666666667 0.514 1.05685609028366 23.6966262881286 -0.0406666666666667 0.514 0.783996982185197 0.00426911025550676 -0.288079996803835 4.71557758504302 Q5JSH3 WDR44 Q5JSH3.S403.p_WDR44 Q5JSH3_S403s _1_1_403_403 Q5JSH3 Q5JSH3|Q5JSH3-2|Q5JSH3-4 WD repeat-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13469.13469.5 25.8 25.8 7.225 6 1 1 0 793.5862 3883.9401 S403s TMT10 394 (K) EYVSNDAAQsDDEEKLQSQPTDTDGGRLK (Q) EY(0.0)VS(0.0)NDAAQS(0.99)DDEEKLQS(0.0)QPT(0.0)DT(0.0)DGGRLK K:TMT10,s:Phosphorylated S WDR44 101935 9 13 95.1 607.92 HUMAN 1 -1.0569 23.6966 VSNDIIQSKEDDSKA-p O15394;S830-p VSNDIIQSKEDDSKA 0.140818172070489 0.842758914018359 -0.256 0.0206666666666667 17.3992976139321 1.04396207151941 -0.256 0.0206666666666667 0.0181999518330118 0.786328094711144 -3.34169841557046 0.28484156082823 O15394 NCAM2 O15394.S830.p_NCAM2 O15394_S830s _1_1_830_830 O15394 O15394|H9KV31 Neural cell adhesion molecule 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.14996.14996.3 12.06 12.06 3.887 3 1 1 0 806.0906 2336.2912 S830s TMT10 823 (K) VSNDIIQsKEDDSKA (-) VS(0.0)NDIIQS(0.99)KEDDS(0.0)KA K:TMT10,s:Phosphorylated S NCAM2 93843.3 2 6 1267.1 160.16 HUMAN 1 -17.3993 1.044 VSNIKSLSFPKLDSD-p Q9NZ09-4;S331-p VSNIKSLSFPKLDSD 0.148724295141356 0.0350031145817527 0.295666666666667 0.331 16.7002743437885 19.6035341908789 0.295666666666667 0.331 0.0213782703872022 0.0109558626979634 3.20383211420037 3.79091851923697 Q9NZ09 UBAP1 Q9NZ09.4.S331.p_UBAP1 Q9NZ09-4_S331s _1_1_331_331 Q9NZ09-4 Q9NZ09-4|Q9NZ09-3|Q9NZ09-2 Isoform 4 of Ubiquitin-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.20779.20779.3 15.28 15.28 2.237 4 1 1 0 816.7592 2368.2963 S331s TMT10 329 (K) SLsFPKLDSDDSNQK (T) S(0.0)LS(0.99)FPKLDS(0.0)DDS(0.0)NQK K:TMT10,s:Phosphorylated S UBAP1 62528.6 2 2 4656.1 28.31 HUMAN 1 16.7003 19.6035 VSNLPPASPCAQVEV-p Q8IZ83;S392-p VSNLPPASPCAQVEV 0.166553758928775 0.502841833560131 0.348333333333333 0.0666666666666667 15.5729767425635 3.99842686827944 0.348333333333333 0.0666666666666667 0.0277141986604464 0.398251401826246 2.98662016114215 0.916673674946503 Q8IZ83 ALDH16A1 Q8IZ83.S392.p_ALDH16A1 Q8IZ83_S392s_1_1_392_392 Q8IZ83 Q8IZ83|Q8IZ83-3|F5H4B6 Aldehyde dehydrogenase family 16 member A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.36416.36416.5 16.41 16.41 3.332 7 1 1 0 1183.5923 5832.9686 N387n S392s TMT10 359 (R) EAQSQGAQVFQAGDVPSERPFYPPTLVSnLPPAsPCAQVEVPWPVVVASPFR (T) EAQS(0.0)QGAQVFQAGDVPS(0.0)ERPFY(0.0)PPT(0.0)LVS(0.0)N(1.0)LPPAS(0.99)PCAQVEVPWPVVVAS(0.0)PFR C:Carbamidomethylation,n:Deamidated,s:Phosphorylated S ALDH16A1 86152.9 1 2 3293.1 54.73 HUMAN 1 15.573 3.9984 VSNQDSKSPLGFYCD-p Q9Y6Q9;S569-p VSNQDSKSPLGFYCD 0.42925899542491 0.309266952029794 0.153666666666667 0.165666666666667 6.76302563301969 6.73655849615409 0.153666666666667 0.165666666666667 0.210715962722368 0.212004046520237 1.41946495421376 1.41443956294426 Q9Y6Q9 NCOA3 Q9Y6Q9.S569.p_NCOA3 Q9Y6Q9_S569s _1_1_569_569 Q9Y6Q9 Q9Y6Q9|Q9Y6Q9-5|Q9Y6Q9-3|Q9Y6Q9-2|Q9Y6Q9-4 Nuclear receptor coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19817.19817.4 20.36 20.36 1.283 8 1 1 0 965.685 3779.7464 S569s TMT10 562 (K) VSNQDSKsPLGFYCDQNPVESSMCQSNSR (D) VS(0.0)NQDS(0.0)KS(0.99)PLGFY(0.0)CDQNPVES(0.0)S(0.0)MCQS(0.0)NS(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NCOA3 156203.6 6 5 503.1 290.6 HUMAN 1 6.763 6.7366 VSNRLVTSPCCIVTS-p P07900;S595-p VSNRLVTSPCCIVTS 0.657542531831908 0.0657120266450726 -0.065 -0.237 3.41477912471905 15.7310737750589 -0.065 -0.237 0.455535353381717 0.0267234560063111 -0.803469845318899 -3.01463636214431 P07900 HSP90AA1 P07900.S595.p_HSP90AA1 P07900_S595s _1_1_595_595 P07900 P07900-2 Heat shock protein HSP 90-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.30865.30865.3 17.52 17.52 1.127 7 1 1 0 919.0882 2675.2829 S595s TMT10 592 (R) LVTsPCCIVTSTYGWTANMER (I) LVT(0.0)S(0.99)PCCIVT(0.0)S(0.0)T(0.0)Y(0.0)GWT(0.0)ANMER C:Carbamidomethylation,s:Phosphorylated S HSP90AA1 85057.6 3 17 43.1 810.87 HUMAN 1 -3.4148 -15.7311 VSPAQAASPFIPLDE-p Q96E09;S276-p VSPAQAASPFIPLDE 0.462390930821182 0.00725281624963642 0.125 0.502666666666667 6.17898863218802 30.6098735780299 0.125 0.502666666666667 0.241046670328219 0.000868985724861761 1.31638692785354 6.60908925418041 Q96E09 FAM122A Q96E09.S276.p_FAM122A Q96E09_S270sS276s_2_2_270_276 Q96E09 Q96E09 Protein FAM122A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.34021.34021.3 12.58 12.58 2 9 2 2 0 1121.8907 3203.7088 S270s S276s TMT10 261 (K) VSTTTDSPVsPAQAAsPFIPLDELSSK (-) VS(0.0)T(0.0)T(0.0)T(0.0)DS(0.0)PVS(0.99)PAQAAS(0.99)PFIPLDELS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S FAM122A 30813.8 3 15 509.1 287.77 HUMAN 1 6.179 30.6099 VSPDLHITPIYEGRT-p Q99569;T412-p VSPDLHITPIYEGRT 0.184447384996334 0.288966910051086 0.239666666666667 -0.149333333333333 14.4346685871717 7.1131187444858 0.239666666666667 -0.149333333333333 0.0360191235763896 0.194396358607341 2.77307985415065 -1.48038424331342 Q99569 PKP4 Q99569.T412.p_PKP4 Q99569_S406sT412t_2_2_406_412 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.23321.23321.3 9.14 9.14 2.309 4 2 2 0 715.3395 1984.0701 S406s T412t TMT10 403 (R) SAVsPDLHItPIYEGR (T) S(0.0)AVS(0.99)PDLHIT(0.99)PIY(0.0)EGR s:Phosphorylated S,t:Phosphorylated T PKP4 132664.7 1 36 122.1 546.31 HUMAN 1 14.4347 -7.1131 VSPETEASEESLQFN-p Q12888-2;S1004-p VSPETEASEESLQFN 0.899853160329925 0.468623666130989 0.0183333333333333 0.0753333333333333 0.896384938633636 4.38831954947556 0.0183333333333333 0.0753333333333334 0.813507396859519 0.364055875941742 0.247681847806372 0.990486851090697 Q12888 TP53BP1 Q12888.2.S1004.p_TP53BP1 Q12888-2_S1004s _1_1_1004_1004 Q12888-2 Q12888-2|Q12888-3|A6NNK5 Isoform 2 of TP53-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.23585.23585.4 24.81 24.81 5.068 5 1 1 0 825.6674 3219.6785 S1004s TMT10 996 (K) LVSPETEAsEESLQFNLEKPATGER (K) LVS(0.0)PET(0.0)EAS(0.99)EES(0.0)LQFNLEKPAT(0.0)GER K:TMT10,s:Phosphorylated S TP53BP1 216167.2 11 43 3.1 2297.07 HUMAN 1 0.8964 4.3883 VSPFKAFSPQPPKFF-p A0A1B0GUA8;S1500-p VSPFKAFSPQPPKFF 0.41269671419308 0.0284058958503704 -0.129 -0.312333333333333 7.09092974765074 20.9513674124172 -0.129 -0.312333333333333 0.195392111105562 0.00803273165105701 -1.47692078651194 -4.08211059417312 A0A1B0GUA8 NotFound A0A1B0GUA8.S1500.p_NotFound A0A1B0GUA8_S1500s _1_1_1500_1500 A0A1B0GUA8 A0A1B0GUA8|Q9H1H9 Kinesin-like protein KIF13A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.13819.14025.3 7.2 7.2 99 1 1 1 0 470.5917 1329.7931 S1500s TMT10 1498 (K) AFsPQPPK (F) AFS(1.0)PQPPK K:TMT10,s:Phosphorylated S KIF13A 208874.1 1 8 1079.1 180.11 HUMAN 1 -7.0909 -20.9514 VSPGMLGSINRNDCD-p Q6P0N0;S1048-p VSPGMLGSINRNDCD 0.90589982888838 0.0273588124414629 -0.0196666666666667 -0.403333333333333 0.842582963917896 21.1991207690754 -0.0196666666666667 -0.403333333333333 0.823648105077027 0.00758731164910856 -0.233912135486589 -4.13698111755412 Q6P0N0 MIS18BP1 Q6P0N0.S1048.p_MIS18BP1 Q6P0N0_S1042sS1048s_2_2_1042_1048 Q6P0N0 Q6P0N0 Mis18-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14963.14963.4 9.3 9.3 9.298 3 2 2 0 783.8524 2972.4541 S1042s S1048s TMT10 1035 (K) TPQCQHVsPGMLGsINRNDCDK (Y) T(0.0)PQCQHVS(0.99)PGMLGS(0.99)INRNDCDK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MIS18BP1 129996 1 44 54.1 728.39 HUMAN 1 -0.8426 -21.1991 VSPGPRDSPAFPDSP-p Q9NQS7;S269-p VSPGPRDSPAFPDSP 0.705026582538695 0.0125330187807678 0.054 -0.694333333333333 2.85446197150617 26.532704078516 0.054 -0.694333333333333 0.518267293905151 0.00222192600632863 0.690693620205332 -5.43540178783651 Q9NQS7 INCENP Q9NQS7.S269.p_INCENP Q9NQS7_S263sS269s_2_2_263_269 Q9NQS7 Q9NQS7|Q9NQS7-2 Inner centromere protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23612.23612.3 10.18 10.18 4.589 3 2 2 0 857.0692 2409.2513 S263s S269s TMT10 259 (R) IAQVsPGPRDsPAFPDSPWR (E) IAQVS(0.99)PGPRDS(0.99)PAFPDS(0.0)PWR s:Phosphorylated S INCENP 105826.3 5 28 138.1 524.38 HUMAN 1 2.8545 -26.5327 VSPHGDESPRGSGGG-p Q9Y6J9;S501-p VSPHGDESPRGSGGG 0.952442048084725 0.244658635820142 0.014 0.174 0.419409484173005 8.05755658416282 0.014 0.174 0.907943976102793 0.15640273439732 0.121149886463832 1.64461846336499 Q9Y6J9 TAF6L Q9Y6J9.S501.p_TAF6L Q9Y6J9_S501s _1_1_501_501 Q9Y6J9 Q9Y6J9 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14660.14660.5 28.62 28.62 4.164 9 1 1 0 933.4771 4583.3789 S501s TMT10 484 (R) KMPQLTASAIVSPHGDEsPRGSGGGGPASASGPAASESRPLPR (V) KMPQLT(0.0)AS(0.0)AIVS(0.0)PHGDES(0.99)PRGS(0.0)GGGGPAS(0.0)AS(0.0)GPAAS(0.0)ES(0.0)RPLPR K:TMT10,s:Phosphorylated S TAF6L 68383.7 1 2 2842.1 68.26 HUMAN 1 0.4194 8.0576 VSPPAPGSAPETPED-p Q13459;S1267-p VSPPAPGSAPETPED 0.819226860557372 0.840412671405299 -0.0333333333333333 0.02 1.66833723152602 1.06194762186252 -0.0333333333333333 0.02 0.681030052439047 0.783078387412599 -0.434032399922729 0.289317217791249 Q13459 MYO9B Q13459.S1267.p_MYO9B Q13459_S1267s _1_1_1267_1267 Q13459 Q13459|M0R0P8|Q13459-2 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14036.14036.2 17.89 14.59 3.84 3 1 1 0 1059.0343 2037.0905 S1267s TMT10 1260 (R) VSPPAPGsAPETPEDK (S) VS(0.0)PPAPGS(0.99)APET(0.0)PEDK K:TMT10,s:Phosphorylated S MYO9B 244993.9 3 7 211.1 438.12 HUMAN 1 -1.6683 1.0619 VSPQNNHSPDPGLSN-p Q9NQT8;S1438-p VSPQNNHSPDPGLSN 0.198398862430063 0.851091892922386 0.198666666666667 -0.0196666666666666 13.6763376913117 0.984609292191069 0.198666666666667 -0.0196666666666667 0.0428910058241829 0.797148201844073 2.63368336550878 -0.269986825087787 Q9NQT8 KIF13B Q9NQT8.S1438.p_KIF13B Q9NQT8_S1432sS1438s_2_2_1432_1438 Q9NQT8 Q9NQT8 Kinesin-like protein KIF13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.33152.33152.4 16.69 16.69 1.229 6 2 2 0 1004.5132 3855.0805 S1432s S1438s TMT10 1422 (R) GIAPAPALSVsPQNNHsPDPGLSNLAASYLNPVK (S) GIAPAPALS(0.0)VS(0.99)PQNNHS(0.99)PDPGLS(0.0)NLAAS(0.0)Y(0.0)LNPVK K:TMT10,s:Phosphorylated S KIF13B 204097.3 1 18 335.1 355.82 HUMAN 1 13.6763 -0.9846 VSPRPFSSPSMSPSH-p Q96S59;S483-p VSPRPFSSPSMSPSH 0.373380145180951 0.041636245514941 0.152333333333333 0.390666666666667 7.92849500294293 18.5042637166274 0.152333333333333 0.390666666666667 0.161120388242706 0.0141115145646377 1.62275390423392 3.56202756613132 Q96S59 RANBP9 Q96S59.S483.p_RANBP9 Q96S59_S477sS482sS483s_3_3_477_483 Q96S59 Q96S59|Q96S59-3|Q96S59-2 Ran-binding protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21046.21046.4 15.07 15.07 1.225 10 3 3 0 1025.2089 3857.9103 S477s S482s S483s TMT10 470 (K) SQDSYPVsPRPFssPSMSPSHGMNIHNLASGK (G) S(0.0)QDS(0.0)Y(0.0)PVS(0.99)PRPFS(0.99)S(0.99)PS(0.0)MS(0.0)PS(0.0)HGMNIHNLAS(0.0)GK K:TMT10,s:Phosphorylated S RANBP9 78701.8 10 5 1268.2 160.1 HUMAN 1 7.9285 18.5043 VSPSRSHSPSGSQTR-p Q7Z6E9;S1705-p VSPSRSHSPSGSQTR 0.396983707912819 0.319649289803644 0.221666666666667 0.122 7.40408281941883 6.5511747723621 0.221666666666667 0.122 0.181799095458177 0.221249614549678 1.53157668218472 1.38183903888138 Q7Z6E9 RBBP6 Q7Z6E9.S1705.p_RBBP6 Q7Z6E9_S1705s _1_1_1705_1705 Q7Z6E9 Q7Z6E9 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.1452.1595.3 9.22 9.22 2.245 5 1 1 0 451.5434 1272.6494 S1705s TMT10 1703 (R) SHsPSGSQTR (S) S(0.0)HS(0.99)PS(0.0)GS(0.0)QT(0.0)R s:Phosphorylated S RBBP6 202473.6 1 26 27.1 935.6 HUMAN 1 7.4041 6.5512 VSPSSWKSPPASPES-p Q96JM3;S382-p VSPSSWKSPPASPES 0.457445921290133 0.798803394417741 0.122666666666667 -0.0256666666666667 6.25979027019804 1.36366911985786 0.122666666666667 -0.0256666666666667 0.236603395540794 0.730521644360142 1.33071401528993 -0.362729976982957 Q96JM3 CHAMP1 Q96JM3.S382.p_CHAMP1 Q96JM3_S382s _1_1_382_382 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.19872.19872.3 13.83 9 1.495 9 1 1 0 962.4915 2805.5026 S382s TMT10 372 (K) SSSVSPSSWKsPPASPESWK (S) S(0.0)S(0.0)S(0.0)VS(0.0)PS(0.0)S(0.0)WKS(0.99)PPAS(0.0)PES(0.0)WK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 3 17 25.1 950.05 HUMAN 1 6.2598 -1.3637 VSPSTSYTPSRHKRS-p Q9BTE3;T160-p VSPSTSYTPSRHKRS 0.709582589954489 0.00298089814036961 0.073 -0.686666666666667 2.80193091748307 38.0230615267656 0.073 -0.686666666666667 0.524574177373573 0.000157649953622627 0.679886874800833 -9.276750019895 Q9BTE3 MCMBP Q9BTE3.T160.p_MCMBP Q9BTE3_T160t _1_1_160_160 Q9BTE3 Q9BTE3|Q9BTE3-2 Mini-chromosome maintenance complex-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.8059.8059.2 13.12 10.26 2 7 1 1 0 745.8582 1410.7426 T160t TMT10 153 (R) VSPSTSYtPSR (H) VS(0.0)PS(0.0)T(0.0)S(0.0)Y(0.0)T(0.99)PS(0.0)R t:Phosphorylated T MCMBP 73834.6 2 2 2833.1 68.66 HUMAN 1 2.8019 -38.0231 VSQARCPTPVGDGSS-p Q5TGY3;T99-p VSQARCPTPVGDGSS 0.395179917614244 0.0233337294513057 0.124666666666667 0.368333333333333 7.44259736938375 22.2735051439774 0.124666666666667 0.368333333333333 0.180193973891633 0.00592446973999817 1.53828648981463 4.38004856132232 Q5TGY3 AHDC1 Q5TGY3.T99.p_AHDC1 Q5TGY3_T99t _1_1_99_99 Q5TGY3 Q5TGY3 AT-hook DNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.5291.5291.2 10.86 10.86 2.055 4 1 1 0 764.8363 1448.7001 T99t TMT10 97 (R) CPtPVGDGSSSR (R) CPT(0.99)PVGDGS(0.0)S(0.0)S(0.0)R C:Carbamidomethylation,t:Phosphorylated T AHDC1 170057.9 1 3 334.1 355.89 HUMAN 1 7.4426 22.2735 VSQERPHSNGELQDS-p Q6BDS2;S950-p VSQERPHSNGELQDS 0.150283451076775 0.995082541853919 -0.449666666666667 -0.000999999999999982 16.5887772944713 0.0299119191076747 -0.449666666666667 -0.000999999999999989 0.0219342238095222 0.993136190384148 -3.18207402176341 -0.0090063153421344 Q6BDS2 UHRF1BP1 Q6BDS2.S950.p_UHRF1BP1 Q6BDS2_S950s _1_1_950_950 Q6BDS2 Q6BDS2|H7C1J4 UHRF1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20456.20456.4 21.42 21.42 1.397 5 1 1 0 1107.7977 4348.2057 S950s TMT10 932 (K) VLEESSIENQDVSQERPHsNGELQDSGPLAQQLAGK (G) VLEES(0.0)S(0.0)IENQDVS(0.0)QERPHS(0.99)NGELQDS(0.0)GPLAQQLAGK K:TMT10,s:Phosphorylated S UHRF1BP1 160680.5 3 28 398.2 328.88 HUMAN 1 -16.5888 -0.0299 VSQGSSVSLNSNDSA-p O43166;S123-p VSQGSSVSLNSNDSA 0.701612625583825 0.88733109138329 0.0816666666666667 0.017 2.89303248555355 0.73045407405339 0.0816666666666667 0.017 0.513684843007132 0.845190472145397 0.698600969363725 0.204808837249614 O43166 SIPA1L1 O43166.S123.p_SIPA1L1 O43166_S123sS126s_2_2_123_126 O43166 O43166|O43166-2|O43166-3 Signal-induced proliferation-associated 1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20797.20797.3 15.32 15.32 2.354 8 2 2 0 905.0923 2553.3231 S123s S126s TMT10 113 (K) SSPVSQGSSVsLNsNDSAMLK (S) S(0.0)S(0.0)PVS(0.0)QGS(0.0)S(0.0)VS(0.99)LNS(0.99)NDS(0.0)AMLK K:TMT10,s:Phosphorylated S SIPA1L1 201223.1 1 33 46.1 777.88 HUMAN 1 2.893 0.7305 VSQISVLSGGKAKCS-p O15143;S336-p VSQISVLSGGKAKCS 0.351202113945675 0.571434679042828 0.133 0.0546666666666667 8.44467311063564 3.27564773782881 0.133 0.0546666666666667 0.14306476602689 0.470365246859549 1.71222577994663 0.775749592006549 O15143 ARPC1B O15143.S336.p_ARPC1B O15143_S336s _1_1_336_336 O15143 O15143 Actin-related protein 2/3 complex subunit 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.17910.17910.3 14.53 14.53 1.322 4 1 1 0 605.3332 1734.0162 S336s TMT10 327 (K) NSVSQISVLsGGK (A) NS(0.0)VS(0.0)QIS(0.0)VLS(0.99)GGK K:TMT10,s:Phosphorylated S ARPC1B 41747.8 2 1 5035.1 23.68 HUMAN 1 8.4447 3.2756 VSQMPLRYGMNPHQT-p P31939;Y208-p VSQMPLRYGMNPHQT 0.386191491797539 0.462467279344292 -0.136333333333333 0.144 7.64866805920412 4.46608976959592 -0.136333333333333 0.144 0.171843533448784 0.357594658546629 -1.57414775820264 1.00505362450197 P31939 ATIC P31939.Y208.p_ATIC P31939_Y208y _1_1_208_208 P31939 P31939|P31939-2 Bifunctional purine biosynthesis protein PURH GG20160819_MSz_CCLE_T4D7_pY_Injection_02.17147.17147.4 11.55 7.49 2.042 4 1 1 0 657.0922 2545.3637 Y208y TMT10 208 (R) yGMNPHQTPAQLYTLQPK (L) Y(0.99)GMNPHQT(0.0)PAQLY(0.0)T(0.0)LQPK K:TMT10,y:Phosphorylated Y ATIC 65128.2 1 2 132.1 24.15 HUMAN 1 -7.6487 4.4661 VSQPSTPSPPKPTGI-p J3KNL6;S595-p VSQPSTPSPPKPTGI 0.706604154820368 0.0421452777646216 -0.0513333333333333 0.247333333333333 2.83272571904404 18.4259683332039 -0.0513333333333334 0.247333333333333 0.520867701508107 0.0143682265365924 -0.686227282984858 3.54600191857488 J3KNL6 SEC16A J3KNL6.S595.p_SEC16A J3KNL6_T593tS595s_2_2_593_595 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25772.25772.3 10.08 8.72 1.112 10 2 2 0 1302.9891 3747.0208 T593t S595s TMT10 586 (R) GSVSQPStPsPPKPTGIFQTSANSSFEPVK (S) GS(0.0)VS(0.0)QPS(0.0)T(0.99)PS(0.99)PPKPT(0.0)GIFQT(0.0)S(0.0)ANS(0.0)S(0.0)FEPVK K:TMT10,t:Phosphorylated T,s:Phosphorylated S SEC16A 253486.5 19 50 15.1 1143.82 HUMAN 1 -2.8327 18.426 VSQQPEDSQQDLPGE-p O15031;S1570-p VSQQPEDSQQDLPGE 0.531228942694481 0.083533601731969 0.0886666666666667 0.23 5.08357661649214 14.2734484425649 0.0886666666666667 0.23 0.310200389182409 0.037381364993294 1.11935213740469 2.74158001132924 O15031 PLXNB2 O15031.S1570.p_PLXNB2 O15031_S1570s _1_1_1570_1570 O15031 O15031 Plexin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12077.12077.2 17.68 17.68 3.999 2 1 1 0 1139.53 2198.0887 S1570s TMT10 1561 (K) VGVSQQPEDsQQDLPGER (H) VGVS(0.0)QQPEDS(0.99)QQDLPGER s:Phosphorylated S PLXNB2 207862.1 1 1 5055.1 23.48 HUMAN 1 5.0836 14.2734 VSQSQPGSRSGSPGR-p E3W994;S459-p VSQSQPGSRSGSPGR 0.822233843648 0.55231070916662 -0.0356666666666667 0.066 1.63658529696573 3.47249997489057 -0.0356666666666667 0.066 0.686027413406543 0.449521017902184 -0.426727519150928 0.814726648565135 E3W994 NotFound E3W994.S459.p_NotFound E3W994_S459s _1_1_459_459 E3W994 E7EW49|E7ERI8|O75122|J3KR49|E3W994 CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.5696.5696.2 11.55 11.55 3.474 3 1 1 0 693.3265 1305.6783 S459s TMT10 451 (K) MVSQSQPGsR (S) MVS(0.0)QS(0.0)QPGS(0.99)R s:Phosphorylated S CLASP2 139660.6 3 8 158.1 498.15 HUMAN 1 -1.6366 3.4725 VSQSQPGSRSSSPGK-p Q7Z460-4;S691-p VSQSQPGSRSSSPGK 0.954047274316953 0.51215165669485 0.012 -0.0793333333333333 0.400023076333589 3.89815571847969 0.012 -0.0793333333333333 0.912005993378968 0.407553313267644 0.11577508138978 -0.89746206665298 Q7Z460 CLASP1 Q7Z460.4.S691.p_CLASP1 Q7Z460-4_S691s _1_1_691_691 Q7Z460-4 Q7Z460-4 Isoform 4 of CLIP-associating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.6241.6241.3 12.48 12.48 2.219 6 1 1 0 709.3727 2046.1344 S691s TMT10 683 (K) VVSQSQPGsRSSSPGK (L) VVS(0.0)QS(0.0)QPGS(0.99)RS(0.0)S(0.0)S(0.0)PGK K:TMT10,s:Phosphorylated S CLASP1 164028.5 1 43 158.3 498.15 HUMAN 1 0.4 -3.8982 VSQSRKPSASERLPD-p E7ETA6;S384-p VSQSRKPSASERLPD 0.0650066662748629 0.0329048883579811 -0.488333333333333 0.291333333333333 25.6870147927171 19.9991451125579 -0.488333333333333 0.291333333333333 0.00269959441337854 0.0100019686448331 -5.21990748255433 3.87514097177259 E7ETA6 PCM1 E7ETA6.S384.p_PCM1 E7ETA6_S384s _1_1_384_384 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6|Q15154-3|E9PGW9 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.17688.17688.4 12.6 12.6 1.376 3 1 1 0 707.6476 2747.591 S384s Hydrogen 382 (R) KPsASERLPDEKVELFSK (M) KPS(0.99)AS(0.0)ERLPDEKVELFS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S PCM1 229381.8 6 13 13.1 1159.95 HUMAN 1 -25.687 19.9991 VSRGDQESPDACLPP-p Q14676;S1033-p VSRGDQESPDACLPP 0.228808163463225 0.0152476455674231 0.182333333333333 0.361333333333333 12.3091458361361 25.1322626313778 0.182333333333333 0.361333333333333 0.0587604910416721 0.00306742347467325 2.38729152514935 5.07098010786787 Q14676 MDC1 Q14676.S1033.p_MDC1 Q14676_S1033s _1_1_1033_1033 Q14676 Q14676|Q14676-2|Q14676-3 Mediator of DNA damage checkpoint protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17949.18158.4 22.07 17.3 3.333 4 1 1 0 956.2251 3741.9158 S1033s Hydrogen 1029 (R) GDQEsPDACLPPTVPEAPAPPQKPLNSQSQK (H) GDQES(0.99)PDACLPPT(0.0)VPEAPAPPQKPLNS(0.0)QS(0.0)QK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S MDC1 227803.2 12 27 6.1 1662.62 HUMAN 1 12.3091 25.1323 VSRHASSSPESPKPA-p Q9UQ35;S437-p VSRHASSSPESPKPA 0.267086807703558 0.264425494415324 -0.167333333333333 0.202 10.8640516216758 7.60986400220948 -0.167333333333333 0.202 0.0819586578547323 0.173385829206702 -2.13230895606533 1.56692830279741 Q9UQ35 SRRM2 Q9UQ35.S437.p_SRRM2 Q9UQ35_S435sS436sS437s_3_3_435_437 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.5795.5795.3 9.54 9.54 9.541 5 3 3 0 865.72 2355.257 S435s S436s S437s TMT10 433 (R) HAsssPESPKPAPAPGSHR (E) HAS(0.99)S(0.99)S(0.99)PES(0.0)PKPAPAPGS(0.0)HR K:TMT10,s:Phosphorylated S SRRM2 300351.7 5 250 2.1 3310.34 HUMAN 1 -10.8641 7.6099 VSRPYKISESSKVYR-p Q8N4N3;S17-p VSRPYKISESSKVYR 0.00550926337302713 0.000952253650599092 -2.42933333333333 -1.93533333333333 62.206756613371 54.0171108000923 -2.42933333333333 -1.93533333333333 6.01622872162895e-07 3.96541751026133e-06 -26.622100884292 -18.6621763723281 Q8N4N3 KLHL36 Q8N4N3.S17.p_KLHL36 Q8N4N3_S17s _1_1_17_17 Q8N4N3 Q8N4N3|Q8N4N3-2 Kelch-like protein 36 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9037.9037.4 9.74 9.74 2.236 5 1 1 0 537.8061 2068.237 S17s TMT10 10 (R) VSRPYKIsESSK (V) VS(0.0)RPY(0.0)KIS(0.99)ES(0.0)S(0.0)K K:TMT10,s:Phosphorylated S KLHL36 70864.7 2 1 5949.1 15.09 HUMAN 1 -62.2068 -54.0171 VSRQCACSPGGSEDS-p Q6PIJ6;S753-p VSRQCACSPGGSEDS 0.649974308625089 0.336797637761516 0.127666666666667 0.240333333333333 3.50910165211226 6.26303068298509 0.127666666666667 0.240333333333333 0.445748442928183 0.236426923873705 0.822048405417942 1.33095834992348 Q6PIJ6 FBXO38 Q6PIJ6.S753.p_FBXO38 Q6PIJ6_S753s _1_1_753_753 Q6PIJ6 Q6PIJ6|Q6PIJ6-2 F-box only protein 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.11324.11324.3 21.9 21.9 1.16 5 1 1 0 1071.0777 3131.2496 S753s TMT10 749 (R) QCACsPGGSEDSEAMEEGDAESSVCPR (C) QCACS(0.99)PGGS(0.0)EDS(0.0)EAMEEGDAES(0.0)S(0.0)VCPR C:Carbamidomethylation,s:Phosphorylated S FBXO38 135824.2 3 3 2435.1 83.55 HUMAN 1 3.5091 6.263 VSRQTFLSHGDDFRF-p Q6ZRV2;S436-p VSRQTFLSHGDDFRF 0.949272863477047 0.55586119155017 0.01 -0.0746666666666667 0.447883458699535 3.43601912585562 0.01 -0.0746666666666666 0.902010626866906 0.45331290980137 0.129008302082433 -0.807539700698118 Q6ZRV2 FAM83H Q6ZRV2.S436.p_FAM83H Q6ZRV2_S436s _1_1_436_436 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.13497.13497.3 12.02 12.02 2.679 2 1 1 0 544.5853 1551.7753 S436s TMT10 432 (R) QTFLsHGDDFR (F) QT(0.0)FLS(0.99)HGDDFR s:Phosphorylated S FAM83H 127633.5 1 5 7.1 1347.23 HUMAN 1 0.4479 -3.436 VSRRRHNSSDGFFNN-p Q9HC44;S49-p VSRRRHNSSDGFFNN 0.131668369209757 0.315782591117526 0.291333333333333 0.143 18.1820200198161 6.6137025670239 0.291333333333333 0.143 0.0151984044685364 0.21808698237943 3.49919670754507 1.3928458376468 Q9HC44 GPBP1L1 Q9HC44.S49.p_GPBP1L1 Q9HC44_S49s _1_1_49_49 Q9HC44 Q9HC44 Vasculin-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14954.14954.2 10.45 10.45 1.165 2 1 1 0 935.921 1790.8772 S49s TMT10 47 (R) HNsSDGFFNNGPLR (T) HNS(0.99)S(0.0)DGFFNNGPLR s:Phosphorylated S GPBP1L1 52642.9 4 2 2370.1 86.31 HUMAN 1 18.182 6.6137 VSRRRSRSPLDKDTY-p Q96T37;S259-p VSRRRSRSPLDKDTY 0.845365629313045 0.136228682802852 0.039 0.164666666666667 1.40933502708091 11.407300629328 0.039 0.164666666666667 0.722880479460015 0.0723219183032428 0.373622557470658 2.22657816896329 Q96T37 RBM15 Q96T37.S259.p_RBM15 Q96T37_S257sS259s_2_2_257_259 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13367.13367.3 9.49 9.49 3.629 7 2 2 0 977.1345 2769.4481 S257s S259s Hydrogen 257 (R) sRsPLDKDTYPPSASVVGASVGGHR (H) S(0.99)RS(0.99)PLDKDT(0.0)Y(0.0)PPS(0.0)AS(0.0)VVGAS(0.0)VGGHR K:TMT10-Lys-Only,s:Phosphorylated S RBM15 107414.9 15 35 55.1 724.11 HUMAN 1 1.4093 11.4073 VSRRTELSIDISSKQ-p Q9UHD8;S111-p VSRRTELSIDISSKQ 0.896771225701303 0.243115529183382 0.0216666666666667 -0.118666666666667 0.927707252665639 8.09096874630522 0.0216666666666667 -0.118666666666667 0.807661301975658 0.155204076990043 0.255644935224978 -1.65040827158684 Q9UHD8 SEPT9 Q9UHD8.S111.p_SEPT9 Q9UHD8_S111s _1_1_111_111 Q9UHD8 Q9UHD8|Q9UHD8-5|Q9UHD8-2|Q9UHD8-7 Septin-9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.16394.16394.3 12.34 6.05 2.864 4 1 1 0 596.3291 1707.0053 S111s TMT10 107 (R) RTELsIDISSK (Q) RT(0.0)ELS(0.99)IDIS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SEPT9 65685.6 3 12 110.1 572.91 HUMAN 1 0.9277 -8.091 VSRSRKQSEELQSVQ-p Q9BU64;S35-p VSRSRKQSEELQSVQ 0.0773024022825936 0.0045642445280084 -0.407 -0.670666666666667 23.8099839999414 34.2792758593256 -0.407 -0.670666666666667 0.00415912142773775 0.00037331239854875 -4.74855979552386 -7.83262300375126 Q9BU64 CENPO Q9BU64.S35.p_CENPO Q9BU64_S35s _1_1_35_35 Q9BU64 Q9BU64|Q9BU64-2 Centromere protein O HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13646.13646.3 18.8 13.82 4.462 3 1 1 0 857.1144 2489.3612 S35s Hydrogen 33 (R) KQsEELQSVQAQEGALGTK (I) KQS(0.99)EELQS(0.0)VQAQEGALGT(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S CENPO 34241.5 2 1 3208.1 57.38 HUMAN 1 -23.81 -34.2793 VSRSRQGSGVILRQE-p P46108;S125-p VSRSRQGSGVILRQE 0.427827084939138 0.49641731294961 -0.154 0.0736666666666667 6.79007321890487 4.06793617451425 -0.154 0.0736666666666667 0.209407715092887 0.391928082329316 -1.42421425466079 0.92993410170819 P46108 CRK P46108.S125.p_CRK P46108_S125s _1_1_125_125 P46108 P46108|P46108-2 Adapter molecule crk HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.13456.13456.3 14.84 14.84 12.98 2 1 1 0 638.6424 1833.9454 S125s Hydrogen 123 (R) QGsGVILRQEEAEYVR (A) QGS(0.99)GVILRQEEAEY(0.0)VR s:Phosphorylated S CRK 33887.1 4 4 1891.1 108.77 HUMAN 1 -6.7901 4.0679 VSRTRVKTLAMDTIL-p P46926;T161-p VSRTRVKTLAMDTIL 0.699562238894903 0.823527686681082 0.058 0.0253333333333333 2.91612203485471 1.18137567006993 0.058 0.0253333333333333 0.510961051070333 0.761837652304872 0.703323633136244 0.318743375795307 P46926 GNPDA1 P46926.T161.p_GNPDA1 P46926_T161t _1_1_161_161 P46926 P46926|D6R9P4|P46926-2 Glucosamine-6-phosphate isomerase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30512.30512.3 13.69 13.69 1.403 2 1 1 0 685.72 1975.1774 T161t TMT10 159 (R) VKtLAMDTILANAR (F) VKT(0.99)LAMDT(0.0)ILANAR K:TMT10,t:Phosphorylated T GNPDA1 32839.1 2 2 4121.1 37.16 HUMAN 1 2.9161 1.1814 VSRVPYPSPTCVKSE-p P10275;S516-p VSRVPYPSPTCVKSE 0.21279799378029 0.902304035448506 -0.277333333333333 -0.0133333333333333 12.9687134512483 0.622034476540922 -0.277333333333333 -0.0133333333333333 0.0504810819965644 0.86655583778123 -2.50543077986949 -0.176166846104909 P10275 AR P10275.S516.p_AR P10275_S516s _1_1_516_516 P10275 P10275|A0A087X1B6|F5GZG9|P10275-4|P10275-3|A0A087WZ66|E9PEG3|A0A087WUX9 Androgen receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.18037.18037.3 7.77 7.77 1.289 3 1 1 0 562.6282 1605.9075 S516s TMT10 512 (R) VPYPsPTCVK (S) VPY(0.0)PS(0.99)PT(0.0)CVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AR 100726.6 2 3 2116.1 96.92 HUMAN 1 -12.9687 -0.622 VSSAASVYAGAGGSG-p P05783;Y36-p VSSAASVYAGAGGSG 0.0332552830156115 0.232647174589737 0.59 -0.429 34.5691136425055 8.34170283583058 0.59 -0.429 0.000349211579270711 0.146497332336648 7.95209570626052 -1.69382990380059 P05783 KRT18 P05783.Y36.p_KRT18 P05783_Y36y _1_1_36_36 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.17126.17126.4 27.27 27.27 9.445 10 1 1 0 791.6403 3083.5708 Y36y TMT10 15 (R) SLGSVQAPSYGARPVSSAASVyAGAGGSGSR (I) S(0.0)LGS(0.0)VQAPS(0.0)Y(0.0)GARPVS(0.0)S(0.0)AAS(0.0)VY(0.99)AGAGGS(0.0)GS(0.0)R y:Phosphorylated Y KRT18 48057 2 3 29.1 61.39 HUMAN 1 34.5691 -8.3417 VSSAREGSPEPWLPL-p Q494U1;S611-p VSSAREGSPEPWLPL 0.791871823413259 0.321496834789512 -0.0533333333333333 0.136333333333333 1.95611193445991 6.51571294244311 -0.0533333333333334 0.136333333333333 0.637365873846649 0.223063599384525 -0.499060627700516 1.37559147686083 Q494U1 PLEKHN1 Q494U1.S611.p_PLEKHN1 Q494U1_S611s _1_1_611_611 Q494U1 Q494U1|Q494U1-2|Q494U1-3 Pleckstrin homology domain-containing family N member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.25190.25190.2 13.3 10.56 4.579 2 1 1 0 931.9483 1782.9224 S611s TMT10 609 (R) EGsPEPWLPLTDGR (S) EGS(0.99)PEPWLPLT(0.0)DGR s:Phosphorylated S PLEKHN1 72701.4 2 2 4558.1 29.87 HUMAN 1 -1.9561 6.5157 VSSFSRRSSVAQEDS-p A1L390;S617-p VSSFSRRSSVAQEDS 0.924321201525548 0.15510277285571 0.023 -0.232666666666667 0.672857879518758 10.6437469628788 0.023 -0.232666666666667 0.856474056074022 0.0862234316786623 0.189677373649893 -2.09289913376734 A1L390 PLEKHG3 A1L390.S617.p_PLEKHG3 A1L390_S617sS618s_2_2_617_618 A1L390 A1L390|A1L390-3|A1L390-2|G3V311 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.3252.3252.2 9.85 9.85 9.847 3 2 2 0 748.324 1335.7066 S617s S618s Hydrogen 616 (R) RssVAQEDSK (S) RS(0.99)S(0.99)VAQEDS(0.0)K K:TMT10-Lys-Only,s:Phosphorylated S PLEKHG3 135322.7 3 30 284.1 386.18 HUMAN 1 0.6729 -10.6437 VSSFSRTSITPSSQD-p Q5T0T0;S71-p VSSFSRTSITPSSQD 0.852787691574843 0.0755407135921702 0.0466666666666667 0.433333333333333 1.33999627299728 14.8914239919268 0.0466666666666667 0.433333333333333 0.734514498498155 0.0324233288278667 0.357115219422784 2.85626504439789 Q5T0T0 MARCH8 Q5T0T0.S71.p_MARCH8 Q5T0T0_S71s _1_1_71_71 Q5T0T0 Q5T0T0 E3 ubiquitin-protein ligase MARCH8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11296.11296.2 9.6 9.6 1.528 5 1 1 0 837.3933 1593.8104 S71s TMT10 70 (R) TsITPSSQDICR (I) T(0.0)S(0.99)IT(0.0)PS(0.0)S(0.0)QDICR C:Carbamidomethylation,s:Phosphorylated S MARCH8 33877.2 1 1 4048.2 38.63 HUMAN 1 1.34 14.8914 VSSHKFNSFYGDPPE-p O14936-3;S319-p VSSHKFNSFYGDPPE 0.0466874864502887 0.0910402272591607 -0.655333333333333 0.372666666666667 29.5880122660431 13.7672748999933 -0.655333333333334 0.372666666666667 0.00109950896146495 0.0420022455947004 -6.30774816099317 2.64873134607793 O14936 CASK O14936.3.S319.p_CASK O14936-3_S319s _1_1_319_319 O14936-3 O14936-3 Isoform 3 of Peripheral plasma membrane protein CASK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36934.36934.5 28.07 26.23 2.149 10 1 1 0 1080.3025 5317.4935 S319s TMT10 317 (K) FNsFYGDPPEELPDFSEDPTSSGAVSQVLDSLEEIHALTDCSEK (D) FNS(0.99)FY(0.0)GDPPEELPDFS(0.0)EDPT(0.0)S(0.0)S(0.0)GAVS(0.0)QVLDS(0.0)LEEIHALT(0.0)DCS(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CASK 103024.6 1 5 1824.1 112.53 HUMAN 1 -29.588 13.7673 VSSISQVSPERGMPP-p P42356;S265-p VSSISQVSPERGMPP 0.454779686832747 0.492365215748871 0.213666666666667 -0.096 6.3128024208573 4.11343606501985 0.213666666666667 -0.096 0.233732851767174 0.387843389391761 1.34010119312073 -0.938589532033237 P42356 NotFound P42356.S265.p_NotFound P42356_S265s _1_1_265_265 P42356 P42356 Phosphatidylinositol 4-kinase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10369.10369.2 15.9 15.9 2.284 7 1 1 0 886.9357 1692.8966 S265s TMT10 255 (K) TSSVSSISQVsPER (G) T(0.0)S(0.0)S(0.0)VS(0.0)S(0.0)IS(0.0)QVS(0.99)PER s:Phosphorylated S PI4KA 239393.6 2 9 1109.1 176.13 HUMAN 1 6.3128 -4.1134 VSSKGLPSPYNMSSA-p P15924;S2815-p VSSKGLPSPYNMSSA 0.89652816320496 0.645772194420276 0.024 -0.0443333333333333 0.930088619875211 2.58930977462471 0.024 -0.0443333333333333 0.807218558398341 0.550895243375852 0.256248771931076 -0.635604117480402 P15924 DSP P15924.S2815.p_DSP P15924_S2815s _1_1_2815_2815 P15924 P15924|P15924-3|P15924-2 Desmoplakin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.16443.16443.3 12.76 12.76 2.813 5 1 1 0 610.6201 1749.8791 S2815s TMT10 2812 (K) GLPsPYNMSSAPGSR (S) GLPS(0.99)PY(0.0)NMS(0.0)S(0.0)APGS(0.0)R s:Phosphorylated S DSP 334221.3 7 21 104.1 590.4 HUMAN 1 0.9301 -2.5893 VSSPVLFSPVGRRSS-p Q8WUM0;S50-p VSSPVLFSPVGRRSS 0.108078410418423 0.00356137322963082 0.379 -0.618 20.3295680400738 36.4957174342302 0.379 -0.618 0.009269220127277 0.000224092982404768 3.95003891775935 -8.66149057144907 Q8WUM0 NUP133 Q8WUM0.S50.p_NUP133 Q8WUM0_S50s _1_1_50_50 Q8WUM0 Q8WUM0 Nuclear pore complex protein Nup133 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.30476.30476.3 23.14 23.14 2.33 4 1 1 0 717.0594 2069.1956 S50s TMT10 36 (K) GLPLGSAVSSPVLFsPVGR (R) GLPLGS(0.0)AVS(0.0)S(0.0)PVLFS(0.99)PVGR s:Phosphorylated S NUP133 130003.6 7 5 652.1 254.15 HUMAN 1 20.3296 -36.4957 VSSSGLDSLGRYRSS-p O75145;S645-p VSSSGLDSLGRYRSS 0.536490244253901 0.685738501178587 0.107333333333333 -0.0393333333333333 5.002261783363 2.24235292429461 0.107333333333333 -0.0393333333333333 0.316063119097317 0.596711911911432 1.10447257374783 -0.561759959238883 O75145 PPFIA3 O75145.S645.p_PPFIA3 O75145_S645s _1_1_645_645 O75145 O75145 Liprin-alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13213.13213.2 12.1 12.1 4.442 4 1 1 0 693.8455 1306.7164 S645s TMT10 638 (R) VSSSGLDsLGR (Y) VS(0.0)S(0.0)S(0.0)GLDS(0.99)LGR s:Phosphorylated S PPFIA3 134064.6 4 11 248.2 410.18 HUMAN 1 5.0023 -2.2424 VSSSRSVSGSPEPAA-p A9Z1X7;S763-p VSSSRSVSGSPEPAA 0.648807472849326 0.0225946288925487 0.0663333333333333 0.428166666666667 3.52217857049659 22.480728528501 0.0663333333333333 0.428166666666667 0.444408281065777 0.00564842214647052 0.824615747641506 4.42791909022055 A9Z1X7 NotFound A9Z1X7.S763.p_NotFound A9Z1X7_S763sS765s_2_2_763_765 A9Z1X7 A9Z1X7|Q8IYB3|Q8IYB3-2|E9PCT1 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.9880.9880.3 7.83 5.92 2.841 3 2 2 0 549.9313 1487.847 S763s S765s TMT10 761 (R) SVsGsPEPAAK (K) S(0.0)VS(0.99)GS(0.99)PEPAAK K:TMT10,s:Phosphorylated S SRRM1 103445.7 9 75 8.1 1346.57 HUMAN 2 3.5222 22.4807 VSSTKLVSFHDDSDE-p P11717;S2479-p VSSTKLVSFHDDSDE 0.551730002887042 0.78181324347302 -0.088 0.0286666666666667 4.7662616449037 1.48022252929335 -0.088 0.0286666666666666 0.333713545804753 0.711177072530412 -1.06104489795579 0.390306510778371 P11717 IGF2R P11717.S2479.p_IGF2R P11717_S2479sS2484s_2_2_2479_2484 P11717 P11717 Cation-independent mannose-6-phosphate receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.34014.34415.3 8.1 8.1 99 2 2 2 0 715.311 1983.9861 S2479s S2484s TMT10 2477 (K) LVsFHDDsDEDLLHI (-) LVS(1.0)FHDDS(1.0)DEDLLHI s:Phosphorylated S IGF2R 281330.5 3 8 1952.1 105.32 HUMAN 1 -4.7663 1.4802 VSTFSGRSPPAPPPY-p Q9UMN6;S2288-p VSTFSGRSPPAPPPY 0.449347026753219 0.00610513292104681 -0.103 -0.534666666666667 6.41685953613045 31.9312627411885 -0.103 -0.534666666666667 0.228199162594502 0.000641023167575226 -1.35849958336336 -7.02982703163486 Q9UMN6 KMT2B Q9UMN6.S2288.p_KMT2B Q9UMN6_S2288s _1_1_2288_2288 Q9UMN6 Q9UMN6 Histone-lysine N-methyltransferase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.15835.15835.3 16.27 16.27 2.33 5 1 1 0 742.729 2146.2061 S2288s TMT10 2281 (R) VSTFSGRsPPAPPPYK (A) VS(0.0)T(0.0)FS(0.0)GRS(0.99)PPAPPPY(0.0)K K:TMT10,s:Phosphorylated S KMT2B 297845.7 6 19 388.1 332.76 HUMAN 1 -6.4169 -31.9313 VSTQLVNSIAKTYVG-p Q13163;S311-p VSTQLVNSIAKTYVG 0.392619125506089 0.0708927281476251 -0.132666666666667 -0.205 7.488345144758 15.2805438149997 -0.132666666666667 -0.205 0.178305806248896 0.0296446016241765 -1.54625328798371 -2.92927939440643 Q13163 MAP2K5 Q13163.S311.p_MAP2K5 Q13163_S311s _1_1_311_311 Q13163 Q13163|Q13163-3|Q13163-2|Q13163-4|A6NK28 Dual specificity mitogen-activated protein kinase kinase 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28530.28530.3 18.1 17.03 6.243 3 1 1 0 764.0668 2210.2255 S311s TMT10 299 (K) LCDFGVSTQLVNsIAK (T) LCDFGVS(0.0)T(0.0)QLVNS(0.99)IAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S MAP2K5 50510.2 1 2 4829.1 26.21 HUMAN 1 -7.4883 -15.2805 VSTRPLPSASQKAGE-p Q8ND56-2;S225-p VSTRPLPSASQKAGE 0.812521070407363 0.73598226443066 -0.0746666666666667 0.174 1.73435505919674 1.83474869762716 -0.0746666666666667 0.174 0.670755888640632 0.655428210768308 -0.449134923500524 0.471833621680792 Q8ND56 LSM14A Q8ND56.2.S225.p_LSM14A Q8ND56-2_S225s _1_1_225_225 Q8ND56-2 Q8ND56|Q8ND56-2|Q8ND56-3 Isoform 2 of Protein LSM14 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7496.7496.4 8.41 8.41 1.493 5 1 1 0 499.0281 1913.122 S225s TMT10 216 (R) SPVSTRPLPsASQK (A) S(0.0)PVS(0.0)T(0.0)RPLPS(0.99)AS(0.0)QK K:TMT10,s:Phosphorylated S LSM14A 50781.2 1 5 646.1 254.77 HUMAN 1 -1.7344 1.8347 VSTSNSGSMPNLAQK-p Q9Y2L6;S778-p VSTSNSGSMPNLAQK 0.915262614364166 0.153602271463024 0.0156666666666667 -0.147666666666667 0.752844631736373 10.6983383451246 0.0156666666666667 -0.147666666666667 0.840844207720209 0.0851463754582996 0.210678836574721 -2.10242282111575 Q9Y2L6 FRMD4B Q9Y2L6.S778.p_FRMD4B Q9Y2L6_S778s _1_1_778_778 Q9Y2L6 Q9Y2L6|Q9Y2L6-2|E9PGA7 FERM domain-containing protein 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12879.12879.3 18.01 18.01 2.372 5 1 1 0 886.8019 2578.4226 S778s TMT10 768 (K) KQNVSTSNSGsMPNLAQK (D) KQNVS(0.0)T(0.0)S(0.0)NS(0.0)GS(0.99)MPNLAQK K:TMT10,s:Phosphorylated S FRMD4B 118900.4 4 5 1893.1 108.71 HUMAN 1 0.7528 -10.6983 VSVDIRRTPEEEFSV-p Q6UB99;T1798-p VSVDIRRTPEEEFSV 0.39245931987608 0.0161306732777922 -0.120333333333333 -0.386666666666667 7.49244609270506 24.7567947944077 -0.120333333333333 -0.386666666666667 0.178137515439248 0.00334441775645931 -1.54696728950823 -4.97631047850562 Q6UB99 ANKRD11 Q6UB99.T1798.p_ANKRD11 Q6UB99_T1798t _1_1_1798_1798 Q6UB99 Q6UB99 Ankyrin repeat domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.16387.16387.4 14.35 10.82 1.826 4 1 1 0 672.8473 2608.3983 T1798t TMT10 1790 (R) SVSVDIRRtPEEEFSVGDK (L) S(0.0)VS(0.0)VDIRRT(0.99)PEEEFS(0.0)VGDK K:TMT10,t:Phosphorylated T ANKRD11 299790.8 5 19 340.1 353.72 HUMAN 1 -7.4924 -24.7568 VSVELTNSLFKHDPA-p P14923;S671-p VSVELTNSLFKHDPA 0.826776350969775 0.032805640126017 0.039 0.321666666666667 1.59191483272993 20.0211923076107 0.039 0.321666666666667 0.693120137441247 0.00995132177279696 0.416404254387999 3.8798644812015 P14923 JUP P14923.S671.p_JUP P14923_S671s _1_1_671_671 P14923 P14923 Junction plakoglobin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.22057.22057.3 16.85 16.85 3.921 3 1 1 0 644.3648 1851.1104 S671s TMT10 663 (K) RVSVELTNsLFK (H) RVS(0.0)VELT(0.0)NS(0.99)LFK K:TMT10,s:Phosphorylated S JUP 82485 4 10 957.1 195.02 HUMAN 1 1.5919 20.0212 VSVIPNNSNENIPRV-p Q9H9A7;S225-p VSVIPNNSNENIPRV 0.524205286941981 0.119323159160127 0.0866666666666667 -0.175333333333333 5.18953690178929 12.1761552721349 0.0866666666666667 -0.175333333333333 0.302723621206241 0.0605877008994425 1.13868101405868 -2.36241995417745 Q9H9A7 RMI1 Q9H9A7.S225.p_RMI1 Q9H9A7_S225s _1_1_225_225 Q9H9A7 Q9H9A7 RecQ-mediated genome instability protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.31892.31892.3 17.18 14.88 1.156 2 1 1 0 900.1371 2618.4351 S225s TMT10 210 (R) LIGEPDLVVSVIPNNsNENIPR (V) LIGEPDLVVS(0.0)VIPNNS(0.99)NENIPR s:Phosphorylated S RMI1 70713.7 3 2 2180.1 94.33 HUMAN 1 5.1895 -12.1762 VSVNKRISFAVSEAK-p O94986;S900-p VSVNKRISFAVSEAK 0.971320196635447 0.00417448685164227 0.00766666666666666 -0.605333333333333 0.246870897375672 35.0077767261066 0.00766666666666666 -0.605333333333333 0.944741319613967 0.000315662017122394 0.0725883003422546 -8.09707680799809 O94986 CEP152 O94986.S900.p_CEP152 O94986_S900s _1_1_900_900 O94986 O94986|O94986-3|O94986-2|O94986-1 Centrosomal protein of 152 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.16730.16730.3 10.36 10.36 6.353 2 1 1 0 549.3081 1565.9415 S900s TMT10 898 (K) RIsFAVSEAK (E) RIS(0.99)FAVS(0.0)EAK K:TMT10,s:Phosphorylated S CEP152 198019.2 1 4 1197.1 167.32 HUMAN 1 0.2469 -35.0078 VSVYLEDTD______-p O60487;T214-p VSVYLEDTD______ 0.959656130624186 0.0259754253899632 0.00933333333333333 -0.324666666666667 0.34554972857799 21.5594051085257 0.00933333333333333 -0.324666666666667 0.92351728249607 0.00698328053681644 0.100564337591917 -4.21755194474151 O60487 MPZL2 O60487.T214.p_MPZL2 O60487_T214t _1_1_214_214 O60487 O60487 Myelin protein zero-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18232.18232.2 19.84 19.84 19.84 3 1 1 0 853.9367 1626.8991 T214t TMT10 206 (K) KVSVYLEDtD (-) KVS(0.0)VY(0.0)LEDT(0.99)D K:TMT10,t:Phosphorylated T MPZL2 24654.9 8 1 4439.1 31.37 HUMAN 1 0.3455 -21.5594 VSWDSGGSDEAPPKP-p E7ESA6;S752-p VSWDSGGSDEAPPKP 0.606224103595786 0.637997098329816 0.073 0.0493333333333334 4.01938123453427 2.65776192105568 0.073 0.0493333333333334 0.396334498392392 0.542280275345964 0.920832536802812 0.649913943403968 E7ESA6 NotFound E7ESA6.S752.p_NotFound E7ESA6_S752s _1_1_752_752 E7ESA6 E7ESA6|Q05397-5|Q05397-7|Q05397-2|E9PEI4|B4DWJ1|Q05397-6 Focal adhesion kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11253.11253.4 18.91 13.81 1.156 7 1 1 0 880.9395 3440.7711 S752s TMT10 741 (R) RQATVSWDSGGsDEAPPKPSRPGYPSPR (S) RQAT(0.0)VS(0.0)WDS(0.0)GGS(0.99)DEAPPKPS(0.0)RPGY(0.0)PS(0.0)PR K:TMT10,s:Phosphorylated S PTK2 124992.4 13 6 979.1 192.68 HUMAN 1 4.0194 2.6578 VSWNRNGSLICTASK-p Q9ULV4-3;S240-p VSWNRNGSLICTASK 0.886483152928741 0.390140314400169 -0.0246666666666667 -0.102666666666667 1.02081881676542 5.43562864354577 -0.0246666666666667 -0.102666666666667 0.790529567876969 0.286046827637163 -0.279092486501893 -1.18306707243139 Q9ULV4 CORO1C Q9ULV4.3.S240.p_CORO1C Q9ULV4-3_S240s _1_1_240_240 Q9ULV4-3 Q9ULV4-3|Q9ULV4-2|B4E3S0 Isoform 3 of Coronin-1C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13600.13600.2 12.46 12.46 2.186 3 1 1 0 794.9122 1508.8507 S240s TMT10 238 (R) NGsLICTASK (D) NGS(0.99)LICT(0.0)AS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CORO1C 59745.2 4 1 6309.1 12.46 HUMAN 1 -1.0208 -5.4356 VSYCQNISKCRRVLM-p P46063;S451-p VSYCQNISKCRRVLM 0.572719143373661 0.0304676998806353 -0.0796666666666667 0.286333333333333 4.45575195684861 20.4957019766697 -0.0796666666666667 0.286333333333333 0.358446879810779 0.00892133406967207 -1.00330456684879 3.98230535194689 P46063 RECQL P46063.S451.p_RECQL P46063_S451s _1_1_451_451 P46063 P46063 ATP-dependent DNA helicase Q1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.24302.24302.3 10.49 10.49 1.947 4 1 1 0 725.0204 2093.0812 S451s TMT10 440 (K) LYEMVSYCQNIsK (C) LY(0.0)EMVS(0.0)Y(0.0)CQNIS(0.99)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RECQL 74483 1 4 1140.3 173.27 HUMAN 1 -4.4558 20.4957 VTAAGPPTPPGPPRS-p Q9HCM7;T1010-p VTAAGPPTPPGPPRS 0.80199546725685 0.288689972755116 0.036 0.106666666666667 1.84433258593736 7.11862641449536 0.036 0.106666666666667 0.653983424995127 0.194149983758071 0.474045581766993 1.48134634330535 Q9HCM7 FBRSL1 Q9HCM7.T1010.p_FBRSL1 Q9HCM7_T1010t _1_1_1010_1010 Q9HCM7 Q9HCM7 Fibrosin-1-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27026.27026.4 21.07 18.75 3.364 3 1 1 0 712.8896 2768.5661 T1010t TMT10 989 (R) TPPAAAALGAPPPLVTAAGPPtPPGPPR (S) T(0.0)PPAAAALGAPPPLVT(0.0)AAGPPT(0.99)PPGPPR t:Phosphorylated T FBRSL1 111247 4 10 716.1 237.81 HUMAN 1 1.8443 7.1186 VTAEAQVTPKPWEAK-p Q9H9A7;T123-p VTAEAQVTPKPWEAK 0.900356606703368 0.313720410774928 0.0186666666666667 -0.0966666666666667 0.892602729976206 6.65490224722997 0.0186666666666667 -0.0966666666666667 0.814216177429156 0.216027865865903 0.246717663949552 -1.40009201191645 Q9H9A7 RMI1 Q9H9A7.T123.p_RMI1 Q9H9A7_T123t _1_1_123_123 Q9H9A7 Q9H9A7 RecQ-mediated genome instability protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18399.18399.4 16.57 13.1 1.101 5 1 1 0 855.9619 3340.8468 T123t TMT10 110 (K) NTTNDLVTAEAQVtPKPWEAKPSR (M) NT(0.0)T(0.0)NDLVT(0.0)AEAQVT(0.99)PKPWEAKPS(0.0)R K:TMT10,t:Phosphorylated T RMI1 70713.7 1 1 2180.1 94.33 HUMAN 1 0.8926 -6.6549 VTAEDKGTGNKNKIT-p P11021;T518-p VTAEDKGTGNKNKIT 0.331520254217934 0.276243733917503 0.410333333333333 0.409333333333333 8.95596033591032 7.36111152102956 0.410333333333333 0.409333333333333 0.127175650117973 0.18360683650574 1.80073924897339 1.52364453699308 P11021 HSPA5 P11021.T518.p_HSPA5 P11021_T518t _1_1_518_518 P11021 P11021 78 kDa glucose-regulated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7263.7263.3 9.92 9.92 1.636 2 1 1 0 629.6777 1807.0528 T518t TMT10 511 (R) VTAEDKGtGNK (N) VT(0.0)AEDKGT(0.99)GNK K:TMT10,t:Phosphorylated T HSPA5 72445.7 1 3 3271.1 55.33 HUMAN 1 8.956 7.3611 VTAGYDKSPGGNGFA-p Q92545;S1669-p VTAGYDKSPGGNGFA 0.539743800473841 0.00775301823452055 -0.103333333333333 -0.56 4.94781242401088 30.1284270427668 -0.103333333333333 -0.56 0.320050682458803 0.000970861536796053 -1.09448571097051 -6.46099428635209 Q92545 TMEM131 Q92545.S1669.p_TMEM131 Q92545_S1669s _1_1_1669_1669 Q92545 Q92545 Transmembrane protein 131 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20684.20684.3 15.87 15.87 2.375 4 1 1 0 1036.8657 3028.6095 S1669s TMT10 1654 (K) NGNPTFAAVTAGYDKsPGGNGFAK (V) NGNPT(0.0)FAAVT(0.0)AGY(0.0)DKS(0.99)PGGNGFAK K:TMT10,s:Phosphorylated S TMEM131 205932.9 4 10 789.1 224.94 HUMAN 1 -4.9478 -30.1284 VTAIKSLSIEIGHEV-p Q68DU7;S50-p VTAIKSLSIEIGHEV 0.725981601400238 0.41303192032533 -0.0483333333333333 -0.0813333333333333 2.63796318150028 5.10808618234202 -0.0483333333333333 -0.0813333333333333 0.544758081643247 0.308454692672939 -0.645867885582093 -1.12359778808839 Q68DU7 BET1 Q68DU7.S50.p_BET1 Q68DU7_S50s _1_1_50_50 Q68DU7 Q68DU7|O15155|C9JTT8|O15155-2 BET1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.18357.18357.2 15.11 15.11 2.968 2 1 1 0 875.4822 1669.9889 S50s TMT10 48 (K) SLsIEIGHEVK (T) S(0.0)LS(0.99)IEIGHEVK K:TMT10,s:Phosphorylated S DKFZp781C0425 14159.7 3 2 5076.1 23.23 HUMAN 1 -2.638 -5.1081 VTAVAALSGRPLGTR-p O43674;S19-p VTAVAALSGRPLGTR 0.0360961121648541 0.0010212605030329 -0.708666666666667 -1.35933333333333 33.0856198768243 51.6559736638581 -0.708666666666667 -1.35933333333333 0.000491403236269274 6.82971582417569e-06 -7.42870774641737 -16.8564572093169 O43674 NDUFB5 O43674.S19.p_NDUFB5 O43674_S19s_1_1_19_19 O43674 O43674|E7EWP0|O43674-2|A0A087WYD0|F8WDD2|F8WDZ2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8863.8863.5 7.11 7.11 7.115 5 1 1 0 602.7371 2913.6804 M1m S19s TMT10 1 (-) mAAMSLLRRVSVTAVAALsGRPLGTR (L) M(0.99)AAM(0.0)S(0.0)LLRRVS(0.0)VT(0.0)AVAALS(0.99)GRPLGT(0.0)R m:Oxidized methionine,s:Phosphorylated S NDUFB5 21749.9 1 1 4798.1 26.48 HUMAN 1 -33.0856 -51.656 VTDAPNKSEISKHIE-p O60271;S311-p VTDAPNKSEISKHIE 0.0447859715508879 0.00163159911219948 -0.536666666666667 -1.06966666666667 29.9007366439541 44.4221060478778 -0.536666666666667 -1.06966666666667 0.00102311943753815 3.61234644675235e-05 -6.40197923237858 -12.3110901887548 O60271 SPAG9 O60271.S311.p_SPAG9 O60271_S311s _1_1_311_311 O60271 O60271|A0A087X2D8|O60271-2|O60271-4|O60271-9|O60271-3|O60271-5 C-Jun-amino-terminal kinase-interacting protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13243.13243.3 12.94 12.94 2.815 3 1 1 0 686.05 1976.1631 S311s TMT10 304 (K) VTDAPNKsEISK (H) VT(0.0)DAPNKS(0.99)EIS(0.0)K K:TMT10,s:Phosphorylated S SPAG9 147001.6 4 22 84.1 629.25 HUMAN 1 -29.9007 -44.4221 VTDLSDDSDFDEKAK-p Q9NQZ2;S368-p VTDLSDDSDFDEKAK 0.352975978882113 0.00383558492046931 0.167 1.25966666666667 8.40005532219747 35.7638162726042 0.167 1.25966666666667 0.144542135826351 0.000265227390704184 1.70449851204491 8.37969558899566 Q9NQZ2 UTP3 Q9NQZ2.S368.p_UTP3 Q9NQZ2_S368s _1_1_368_368 Q9NQZ2 Q9NQZ2 Something about silencing protein 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.21168.21168.2 20.86 20.86 1.134 5 1 1 0 1328.5938 2576.2074 S368s TMT10 354 (K) TSAAACAVTDLSDDsDFDEK (A) T(0.0)S(0.0)AAACAVT(0.0)DLS(0.0)DDS(0.99)DFDEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S UTP3 54671.1 1 3 1963.1 105.04 HUMAN 1 8.4001 35.7638 VTEHPSPSPLLSSSF-p P07910;S115-p VTEHPSPSPLLSSSF 0.201315182724605 0.206758724219973 0.225666666666667 -0.130333333333333 13.522279974794 9.00562190134149 0.225666666666667 -0.130333333333333 0.0444397904608034 0.125729679899382 2.605618660888 -1.80868499200519 P07910 HNRNPC P07910.S115.p_HNRNPC P07910_S115s _1_1_115_115 P07910 P07910|G3V2Q1|G3V576 Heterogeneous nuclear ribonucleoproteins C1/C2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29150.29631.4 24.99 24.99 1.271 10 1 1 0 936.4265 3662.7158 S115s TMT10 100 (R) SAAEMYGSVTEHPSPsPLLSSSFDLDYDFQR (D) S(0.0)AAEMY(0.0)GS(0.0)VT(0.0)EHPS(0.0)PS(0.99)PLLS(0.0)S(0.0)S(0.0)FDLDY(0.0)DFQR s:Phosphorylated S HNRNPC 33726.5 1 9 261.2 397.39 HUMAN 1 13.5223 -9.0056 VTEIVKPSPKRKMEP-p Q7Z6E9;S1179-p VTEIVKPSPKRKMEP 0.251544579923944 0.978310404113495 0.188666666666667 -0.00399999999999999 11.4367417806891 0.135986181552625 0.188666666666667 -0.00399999999999997 0.0718333006091449 0.969173167672198 2.23280768502709 -0.0404617061467139 Q7Z6E9 RBBP6 Q7Z6E9.S1179.p_RBBP6 Q7Z6E9_S1179s _1_1_1179_1179 Q7Z6E9 Q7Z6E9|Q7Z6E9-2 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22116.22116.5 18.14 18.14 7.368 3 1 1 0 533.7286 2584.6459 S1179s TMT10 1167 (K) ISKLEVTEIVKPsPK (R) IS(0.0)KLEVT(0.0)EIVKPS(0.99)PK K:TMT10,s:Phosphorylated S RBBP6 202473.6 12 16 27.1 935.6 HUMAN 1 11.4367 -0.136 VTELASRSPIRQDRG-p Q9UQ35;S1112-p VTELASRSPIRQDRG 0.471941186312508 0.0611289118931041 0.0993333333333333 0.289666666666667 6.01686537436135 16.1639985902988 0.0993333333333333 0.289666666666667 0.250215069798074 0.0241880100828013 1.28756747205673 3.09752681869266 Q9UQ35 SRRM2 Q9UQ35.S1112.p_SRRM2 Q9UQ35_S1112s _1_1_1112_1112 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12535.12535.3 16.52 11.09 6.341 3 1 1 0 743.3749 2148.1433 S1112s Hydrogen 1112 (R) sPIRQDRGEFSASPMLK (S) S(0.99)PIRQDRGEFS(0.0)AS(0.0)PMLK K:TMT10-Lys-Only,s:Phosphorylated S SRRM2 300351.7 6 59 2.1 3310.34 HUMAN 1 6.0169 16.164 VTENKIGSPPKTPVS-p Q9HBD1;S549-p VTENKIGSPPKTPVS 0.108085133456159 0.354784657364479 -0.328666666666667 -0.103333333333333 20.3006956269339 5.96760049294578 -0.328666666666667 -0.103333333333333 0.00933104829674184 0.253069583720803 -3.94378212326499 -1.27848710879731 Q9HBD1 RC3H2 Q9HBD1.S549.p_RC3H2 Q9HBD1_S549sT553t_2_2_549_553 Q9HBD1 Q9HBD1|Q9HBD1-4|Q9HBD1-6 Roquin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.22839.22839.5 14.04 6.89 1.295 8 2 2 0 791.2158 3792.111 S549s T553t TMT10 547 (K) IGsPPKtPVSNVAATSAGPSNVGTELNSVPQK (S) IGS(0.99)PPKT(0.99)PVS(0.0)NVAAT(0.0)S(0.0)AGPS(0.0)NVGT(0.0)ELNS(0.0)VPQK K:TMT10,s:Phosphorylated S,t:Phosphorylated T RC3H2 132864.3 3 8 1922.1 106.92 HUMAN 1 -20.3007 -5.9676 VTEPKLATPAGLKKS-p Q15054;T277-p VTEPKLATPAGLKKS 0.30564997757897 0.0102907900139851 -0.148 -0.451 9.64973058613456 27.9033585327682 -0.148 -0.451 0.10839941573342 0.00162055638657122 -1.92091565347772 -5.81035196772812 Q15054 POLD3 Q15054.T277.p_POLD3 Q15054_T277t _1_1_277_277 Q15054 Q15054|Q15054-2|Q15054-3 DNA polymerase delta subunit 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17606.17606.2 7.06 4.6 99 1 1 1 0 654.8897 1228.8029 T277t TMT10 275 (K) LAtPAGLK (K) LAT(1.0)PAGLK K:TMT10,t:Phosphorylated T POLD3 51684.7 1 1 2048.1 100.6 HUMAN 1 -9.6497 -27.9034 VTEPQEESEEEVEEP-p Q13283;S149-p VTEPQEESEEEVEEP 0.184102689727552 0.0332666986005803 0.219 0.271666666666667 14.4487295392414 19.9257548539014 0.219 0.271666666666667 0.0359026947017062 0.0101724254232724 2.77568508759891 3.85944031389828 Q13283 G3BP1 Q13283.S149.p_G3BP1 Q13283_S149s _1_1_149_149 Q13283 Q13283 Ras GTPase-activating protein-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25617.26031.3 27.85 27.85 1.708 3 1 1 0 1175.8366 3445.5281 S149s TMT10 133 (R) YQDEVFGGFVTEPQEEsEEEVEEPEER (Q) Y(0.0)QDEVFGGFVT(0.0)EPQEES(0.99)EEEVEEPEER s:Phosphorylated S G3BP1 52220.4 12 4 1003.1 189.39 HUMAN 1 14.4487 19.9258 VTESRPLSVPVKAML-p Q7Z7G8;S1033-p VTESRPLSVPVKAML 0.036022948076598 0.0139900256023387 -0.559 -0.636333333333333 33.4084484232705 25.7291530875595 -0.559 -0.636333333333333 0.000456199870514797 0.00267352771925337 -7.54002520937439 -5.22408153551951 Q7Z7G8 VPS13B Q7Z7G8.S1033.p_VPS13B Q7Z7G8_S1033s _1_1_1033_1033 Q7Z7G8 Q7Z7G8|Q7Z7G8-6|Q7Z7G8-2|Q7Z7G8-3 Vacuolar protein sorting-associated protein 13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15774.15774.3 13.86 10.91 3.373 4 1 1 0 651.0396 1871.1366 S1033s TMT10 1025 (K) TVTESRPLsVPVK (A) T(0.0)VT(0.0)ES(0.0)RPLS(0.99)VPVK K:TMT10,s:Phosphorylated S VPS13B 454589.9 2 8 766.1 229.13 HUMAN 1 -33.4084 -25.7292 VTEVLAHSGRLEKED-p O43264;S12-p VTEVLAHSGRLEKED 0.0876280835239978 0.0123496888209154 -0.694333333333333 -0.422333333333333 22.5317141109595 26.6387015735812 -0.694333333333333 -0.422333333333333 0.00558249816391647 0.00216835228829506 -4.44458945580767 -5.4637358182557 O43264 ZW10 O43264.S12.p_ZW10 O43264_S12s _1_1_12_12 O43264 O43264|O43264-2|F5H3C1 Centromere/kinetochore protein zw10 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28271.28271.3 14.25 14.25 1.758 3 1 1 0 699.0314 2015.1123 S12s Acetyl 2 (M) ASFVTEVLAHsGRLEK (E) AS(0.0)FVT(0.0)EVLAHS(0.99)GRLEK K:TMT10,s:Phosphorylated S ZW10 89683.7 3 2 3533.1 48.84 HUMAN 1 -22.5317 -26.6387 VTFFEPGSGDENGTS-p O95793;S390-p VTFFEPGSGDENGTS 0.93808991117819 0.12504680267232 -0.013 -0.209 0.541180707113274 11.907928905358 -0.013 -0.209 0.882839852008187 0.0644476534830495 -0.154466439598038 -2.31486972543951 O95793 STAU1 O95793.S390.p_STAU1 O95793_S390s_1_1_390_390 O95793 O95793|O95793-3|O95793-2|Q5JW30 Double-stranded RNA-binding protein Staufen homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22165.22480.3 20.55 13.2 5.367 4 1 1 0 1001.1218 2920.4001 S390s N394n TMT10 383 (K) VTFFEPGsGDEnGTSNKEDEFR (M) VT(0.0)FFEPGS(0.99)GDEN(0.99)GT(0.0)S(0.0)N(0.0)KEDEFR K:TMT10,s:Phosphorylated S,n:Deamidated STAU1 63466.4 9 6 1249.1 162.06 HUMAN 1 -0.5412 -11.9079 VTFFTDNSY______-p P35916;S1362-p VTFFTDNSY______ 0.805134921082359 0.53095240377946 0.0606666666666666 -0.0636666666666666 1.81449911381815 3.69695463606688 0.0606666666666666 -0.0636666666666667 0.658491371550565 0.426878750202479 0.467318054855636 -0.858602543543019 P35916 FLT4 P35916.S1362.p_FLT4 P35916_S1362s _1_1_1362_1362 P35916 P35916|P35916-3 Vascular endothelial growth factor receptor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28954.28954.2 11.05 11.05 4.414 4 1 1 0 701.8093 1322.6466 S1362s TMT10 1355 (R) VTFFTDNsY (-) VT(0.0)FFT(0.0)DNS(0.99)Y(0.0) s:Phosphorylated S FLT4 154865.6 2 2 5189.1 22.01 HUMAN 1 1.8145 -3.697 VTFGEDLSPEVFDES-p Q69YH5;S400-p VTFGEDLSPEVFDES 0.918221647629323 0.0410191468580623 0.0173333333333333 -0.257 0.723723013415973 18.589424746127 0.0173333333333333 -0.257 0.846501434983032 0.0138374965429878 0.203065299814759 -3.57949924438173 Q69YH5 CDCA2 Q69YH5.S400.p_CDCA2 Q69YH5_S400s _1_1_400_400 Q69YH5 Q69YH5|E9PEI0 Cell division cycle-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30167.30167.4 21.8 22.67 5.824 4 1 1 0 800.6636 3119.6665 S400s TMT10 393 (R) VTFGEDLsPEVFDESLPANTPLRK (G) VT(0.0)FGEDLS(0.99)PEVFDES(0.0)LPANT(0.0)PLRK K:TMT10,s:Phosphorylated S CDCA2 114214.8 11 7 407.1 324.13 HUMAN 1 0.7237 -18.5894 VTGDENISDSEIEQY-p Q9HAW0;S385-p VTGDENISDSEIEQY 0.927554876256796 0.495086904281386 0.016 0.0683333333333333 0.646139684194026 4.08261739677608 0.016 0.0683333333333333 0.86175940441822 0.390605415596426 0.182598328025113 0.932729014828877 Q9HAW0 BRF2 Q9HAW0.S385.p_BRF2 Q9HAW0_S385s _1_1_385_385 Q9HAW0 Q9HAW0|Q9HAW0-2 Transcription factor IIIB 50 kDa subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.26897.26897.4 29.99 29.99 2.551 6 1 1 0 846.6655 3303.6728 S385s TMT10 368 (K) RICPVPPVSTVTGDENIsDSEIEQYLR (T) RICPVPPVS(0.0)T(0.0)VT(0.0)GDENIS(0.99)DS(0.0)EIEQY(0.0)LR C:Carbamidomethylation,s:Phosphorylated S BRF2 47445.5 7 3 2140.1 96.01 HUMAN 1 0.6461 4.0826 VTGPDEESFLYFAYG-p O75223;S16-p VTGPDEESFLYFAYG 0.772582000372314 0.071613978754124 0.0573333333333333 0.256333333333333 2.14320364860111 15.2193282077138 0.0573333333333333 0.256333333333333 0.610491519102457 0.0300654133618379 0.540287040251454 2.91775027917423 O75223 GGCT O75223.S16.p_GGCT O75223_S16s _1_1_16_16 O75223 O75223|O75223-4|B8ZZK2|O75223-2|O75223-3|A0A0B4J1Y4 Gamma-glutamylcyclotransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34557.34557.3 21.92 20.33 1.99 6 1 1 0 978.1201 2852.3828 S16s TMT10 8 (K) DVTGPDEEsFLYFAYGSNLLTER (I) DVT(0.0)GPDEES(0.99)FLY(0.0)FAY(0.0)GS(0.0)NLLT(0.0)ER s:Phosphorylated S GGCT 21235.6 2 2 1818.1 112.92 HUMAN 1 2.1432 15.2193 VTGQRLVSPGSANET-p O75369-8;S2509-p VTGQRLVSPGSANET 0.469931060229711 0.347678248681618 -0.0966666666666667 0.095 6.05695052760408 6.0821603814989 -0.0966666666666667 0.095 0.247916223244317 0.246481292034266 -1.29470250902536 1.29887360830517 O75369 FLNB O75369.8.S2509.p_FLNB O75369-8_S2509s _1_1_2509_2509 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|A0A0A0MT44 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28863.28863.3 19.29 19.29 1.115 7 1 1 0 785.7383 2275.2343 S2509s TMT10 2507 (R) LVsPGSANETSSILVESVTR (S) LVS(0.99)PGS(0.0)ANET(0.0)S(0.0)S(0.0)ILVES(0.0)VT(0.0)R s:Phosphorylated S FLNB 283797.6 10 41 67.1 680.07 HUMAN 1 -6.057 6.0822 VTGSPEASISGSKGD-p Q09666;S5735-p VTGSPEASISGSKGD 0.683864509110538 0.0199274763775543 0.0553333333333333 0.326666666666667 3.09383364407505 23.3184845790456 0.0553333333333333 0.326666666666667 0.490474728654678 0.00465748582816355 0.739407372459499 4.62485029946933 Q09666 AHNAK Q09666.S5735.p_AHNAK Q09666_S5731sS5735s_2_2_5731_5735 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.14175.14175.5 14.83 14.83 2.295 5 2 2 0 602.5239 2848.655 S5731s S5735s TMT10 5724 (K) GKGGVTGsPEAsISGSKGDLK (S) GKGGVT(0.0)GS(0.99)PEAS(0.99)IS(0.0)GS(0.0)KGDLK K:TMT10,s:Phosphorylated S AHNAK 629603.7 35 180 1.1 4313.36 HUMAN 1 3.0938 23.3185 VTHDLRVSLEEIYSG-p P25685;S171-p VTHDLRVSLEEIYSG 0.147946322560902 0.218309797777264 -0.283 0.166666666666667 16.8324556264391 8.69789813926402 -0.283 0.166666666666667 0.0207374063304449 0.134961589994642 -3.22970792694418 1.75546008877375 P25685 DNAJB1 P25685.S171.p_DNAJB1 P25685_S171s _1_1_171_171 P25685 P25685|P25685-2 DnaJ homolog subfamily B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19468.19468.4 13.75 6.78 1.59 5 1 1 0 860.7019 3359.8236 S171s TMT10 159 (K) KQDPPVTHDLRVsLEEIYSGCTK (K) KQDPPVT(0.0)HDLRVS(0.99)LEEIY(0.0)S(0.0)GCT(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S DNAJB1 38214.6 2 1 2903.1 66.41 HUMAN 1 -16.8325 8.6979 VTHRPPLSPKSGAEV-p Q8IY67-2;S14-p VTHRPPLSPKSGAEV 0.763094407024719 0.113203169673129 -0.0713333333333333 0.202 2.25079824155246 12.4794927652691 -0.0713333333333333 0.202 0.59555266975041 0.0565002960543441 -0.563653631099943 2.41642073556156 Q8IY67 RAVER1 Q8IY67.2.S14.p_RAVER1 Q8IY67-2_S14s _1_1_14_14 Q8IY67-2 Q8IY67-2|A0A087WZ13 Isoform 2 of Ribonucleoprotein PTB-binding 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13014.13014.3 15.73 15.73 1.149 3 1 1 0 642.6735 1846.0384 S14s Acetyl 2 (M) AADVSVTHRPPLsPK (S) AADVS(0.0)VT(0.0)HRPPLS(0.99)PK K:TMT10,s:Phosphorylated S RAVER1 78371.6 1 2 785.1 225.39 HUMAN 1 -2.2508 12.4795 VTHTVPIYEGYALPH-p P63261;Y166-p VTHTVPIYEGYALPH 0.998180995519267 0.0558541991572987 -0.000666666666666667 0.375666666666667 0.0146318469126536 16.6913740209819 -0.000666666666666691 0.375666666666667 0.996636561815095 0.0214221274057874 -0.00441366828934836 3.19970997047724 P63261 ACTG1 P63261.Y166.p_ACTG1 P63261_Y166y _1_1_166_166 P63261 P60709|P63261 Actin, cytoplasmic 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.31130.31130.4 36.39 36.39 6.868 7 1 1 0 873.9409 3412.7772 Y166y TMT10 148 (R) TTGIVMDSGDGVTHTVPIyEGYALPHAILR (L) T(0.0)T(0.0)GIVMDS(0.0)GDGVT(0.0)HT(0.0)VPIY(0.99)EGY(0.0)ALPHAILR y:Phosphorylated Y ACTG1 42134.4 2 4 1.1 138.33 HUMAN 1 -0.0146 16.6914 VTIIPNFSLDKIYLI-p Q9Y248;S22-p VTIIPNFSLDKIYLI 0.260407038253762 0.113931674968845 -0.209333333333333 -0.2 11.0742775029113 12.4407836809199 -0.209333333333333 -0.2 0.078085833378638 0.0570061395875992 -2.16912725820297 -2.4095157323484 Q9Y248 GINS2 Q9Y248.S22.p_GINS2 Q9Y248_S22s _1_1_22_22 Q9Y248 Q9Y248 DNA replication complex GINS protein PSF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.34672.34672.3 12.64 12.64 4.655 2 1 1 0 676.3806 1947.1567 S22s TMT10 13 (K) ELVTIIPNFsLDK (I) ELVT(0.0)IIPNFS(0.99)LDK K:TMT10,s:Phosphorylated S GINS2 21484.4 1 1 4956.1 24.72 HUMAN 1 -11.0743 -12.4408 VTISKSEYAPSEKMI-p O14832;Y111-p VTISKSEYAPSEKMI 0.848075740909989 0.240957228886928 0.058 0.128666666666667 1.38424812337722 8.14275492689708 0.058 0.128666666666667 0.727068262731712 0.153364381433112 0.367667277524183 1.65938018941209 O14832 PHYH O14832.Y111.p_PHYH O14832_Y111y _1_1_111_111 O14832 O14832|B1ALH6|O14832-2 Phytanoyl-CoA dioxygenase, peroxisomal GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8474.8597.2 15.85 8.17 4.199 3 1 1 0 724.8572 1368.7411 Y111y TMT10 109 (K) SEyAPSEK (M) S(0.0)EY(0.99)APS(0.0)EK K:TMT10,y:Phosphorylated Y PHYH 38937 3 1 109.1 27.05 HUMAN 1 1.3842 8.1428 VTKAAVESPVPKPSE-p Q8N9M5;S246-p VTKAAVESPVPKPSE 0.250142631827727 0.0597418408689324 0.341666666666667 -0.244333333333333 11.4875415091285 16.3045229981124 0.341666666666667 -0.244333333333333 0.0709979565453116 0.0234178866846092 2.24175427355178 -3.12462229195401 Q8N9M5 TMEM102 Q8N9M5.S246.p_TMEM102 Q8N9M5_S246s _1_1_246_246 Q8N9M5 Q8N9M5 Transmembrane protein 102 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10079.10079.3 13.06 13.06 4.609 2 1 1 0 659.3592 1896.0955 S246s TMT10 242 (K) AAVEsPVPKPSEAR (E) AAVES(0.99)PVPKPS(0.0)EAR K:TMT10,s:Phosphorylated S TMEM102 54801.4 3 2 3827.1 42.2 HUMAN 1 11.4875 -16.3045 VTKCKARSPVRLPHE-p O15018;S1280-p VTKCKARSPVRLPHE 0.313268519533153 0.873268242874909 0.194666666666667 -0.0266666666666667 9.42841091217856 0.829142927987465 0.194666666666667 -0.0266666666666666 0.114066708243025 0.826200982703466 1.88255271233276 -0.230431764046497 O15018 PDZD2 O15018.S1280.p_PDZD2 O15018_S1280s _1_1_1280_1280 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7494.7494.4 11.53 11.53 5.177 3 1 1 0 610.579 2359.3246 S1280s TMT10 1278 (K) ARsPVRLPHEGSPSPGEK (A) ARS(0.99)PVRLPHEGS(0.0)PS(0.0)PGEK K:TMT10,s:Phosphorylated S PDZD2 304146 2 20 85.1 628.64 HUMAN 1 9.4284 -0.8291 VTKDADLSPVNASII-p F5H1U9;S483-p VTKDADLSPVNASII 0.14666043453421 0.0296446061015194 -0.255333333333333 -0.385333333333333 16.967017729237 20.6818213431314 -0.255333333333333 -0.385333333333333 0.020104729168218 0.00854708190400459 -3.25614147937167 -4.02289933629164 F5H1U9 NotFound F5H1U9.S483.p_NotFound F5H1U9_S483s _1_1_483_483 F5H1U9 F5H1U9|O75970|O75970-2|O75970-3|O75970-5 Multiple PDZ domain protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.21420.21420.3 13.49 8.56 2.597 3 1 1 0 894.821 2602.4907 S483s TMT10 474 (R) EDVTKDADLsPVNASIIK (E) EDVT(0.0)KDADLS(0.99)PVNAS(0.0)IIK K:TMT10,s:Phosphorylated S MPDZ 224434.7 4 3 1525.1 134.07 HUMAN 1 -16.967 -20.6818 VTKGETLT_______-p Q8WUW1;T75-p VTKGETLT_______ 0.995010386084919 0.049278153336113 -0.00133333333333334 -0.271 0.0442205064911431 17.4880699965286 -0.00133333333333335 -0.271 0.989869514668861 0.0178317103210537 -0.0132941317248222 -3.35674119505702 Q8WUW1 BRK1 Q8WUW1.T75.p_BRK1 Q8WUW1_T75t _1_1_75_75 Q8WUW1 Q8WUW1 Protein BRICK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11507.11507.3 11.91 11.91 5.969 3 1 1 0 462.9265 1306.7982 T75t TMT10 68 (R) VTKGETLt (-) VT(0.0)KGET(0.0)LT(0.99) K:TMT10,t:Phosphorylated T BRK1 8801.8 3 1 6388.1 11.91 HUMAN 1 -0.0442 -17.4881 VTKNEEPSEEEIDAP-p Q9NR30;S121-p VTKNEEPSEEEIDAP 0.376065302166163 0.00444305588772665 -0.129666666666667 -0.58 7.85414080862998 34.5498659040553 -0.129666666666667 -0.58 0.163902628781974 0.000350762704191496 -1.60984735628734 -7.92996518754735 Q9NR30 DDX21 Q9NR30.S121.p_DDX21 Q9NR30_S121s _1_1_121_121 Q9NR30 Q9NR30|Q9NR30-2 Nucleolar RNA helicase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.11008.11008.4 19.88 19.88 99 1 1 1 0 709.8842 2756.5488 S121s TMT10 117 (K) NEEPsEEEIDAPKPKK (M) NEEPS(1.0)EEEIDAPKPKK K:TMT10,s:Phosphorylated S DDX21 87856.3 29 18 103.1 590.75 HUMAN 1 -7.8541 -34.5499 VTKRRSPSLSSKHRK-p A9Z1X7;S664-p VTKRRSPSLSSKHRK 0.627993569436905 0.471157250777541 0.082 0.0896666666666667 3.75255431619387 4.35635324606766 0.082 0.0896666666666667 0.421448554271694 0.366745400080866 0.869524422566141 0.984485046987085 A9Z1X7 NotFound A9Z1X7.S664.p_NotFound A9Z1X7_S664s _1_1_664_664 A9Z1X7 Q9UPU5|A9Z1X7 Serine/arginine repetitive matrix protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.9102.9102.2 8.52 4.45 2.223 4 1 1 0 622.3395 1163.7036 S664s TMT10 662 (R) SPsLSSK (H) S(0.0)PS(0.99)LS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SRRM1 103445.7 1 35 8.1 1346.57 HUMAN 1 3.7526 4.3564 VTLDGVPSPPGYMSD-p Q6PJT7;S527-p VTLDGVPSPPGYMSD 0.865557686443598 0.657795418791363 -0.0256666666666667 -0.046 1.2194319476553 2.48748654548505 -0.0256666666666667 -0.046 0.755190999347184 0.56396395231279 -0.328049702422909 -0.61416582293503 Q6PJT7 ZC3H14 Q6PJT7.S527.p_ZC3H14 Q6PJT7_S527s_1_1_527_527 Q6PJT7 Q6PJT7|Q6PJT7-2|Q6PJT7-9|Q6PJT7-5|G3V411 Zinc finger CCCH domain-containing protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.31407.31407.4 16.03 16.03 1.119 6 1 1 0 1244.0908 4877.3749 S527s M532m TMT10 518 (K) FIVTLDGVPsPPGYmSDQEEDMCFEGMKPVNQTAASNK (G) FIVT(0.0)LDGVPS(0.99)PPGY(0.0)M(0.99)S(0.0)DQEEDM(0.0)CFEGM(0.0)KPVNQT(0.0)AAS(0.0)NK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S,m:Oxidized methionine ZC3H14 83844.1 22 15 420.1 320.31 HUMAN 1 -1.2194 -2.4875 VTLEARNSSEKLPTE-p P38432;S271-p VTLEARNSSEKLPTE 0.24308570935493 0.79714853203013 -0.323333333333333 0.0363333333333333 11.7500311245972 1.37603666000806 -0.323333333333333 0.0363333333333333 0.0668339127763186 0.728444274265163 -2.28807398154967 0.365675712789334 P38432 COIL P38432.S271.p_COIL P38432_S271s _1_1_271_271 P38432 P38432 Coilin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.14827.14827.4 16.87 9.49 1.196 6 1 1 0 750.9127 2920.6649 S271s TMT10 270 (R) NsSEKLPTELSKEEPSTK (N) NS(0.99)S(0.0)EKLPT(0.0)ELS(0.0)KEEPS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S COIL 63291.8 15 9 395.1 330.42 HUMAN 1 -11.75 1.376 VTLFLNGSPKNGKVV-p Q7L273;S11-p VTLFLNGSPKNGKVV 0.86718333213857 0.269755113000643 0.0346666666666667 -0.163 1.20595413429876 7.4919761724977 0.0346666666666667 -0.163 0.757538285283749 0.178156791518201 0.32477082215646 -1.54642770102588 Q7L273 KCTD9 Q7L273.S11.p_KCTD9 Q7L273_S11s _1_1_11_11 Q7L273 Q7L273|K7EQN1|K7ENB5 BTB/POZ domain-containing protein KCTD9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.26125.26125.3 9.18 9.18 9.182 2 1 1 0 538.6408 1533.9405 S11s TMT10 4 (R) VTLFLNGsPK (N) VT(0.0)LFLNGS(0.99)PK K:TMT10,s:Phosphorylated S KCTD9 43193.5 1 1 6836.1 9.18 HUMAN 1 1.206 -7.492 VTMKALGSNDPMQSI-p Q9NQT8;S603-p VTMKALGSNDPMQSI 0.660412515639265 0.105726918995958 -0.0873333333333333 0.202666666666667 3.37426764325687 12.8925603454924 -0.0873333333333333 0.202666666666667 0.45980451946056 0.0513740690913817 -0.795457023607236 2.49037189132062 Q9NQT8 KIF13B Q9NQT8.S603.p_KIF13B Q9NQT8_S603s_1_1_603_603 Q9NQT8 Q9NQT8|E7ERX9 Kinesin-like protein KIF13B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31934.31934.3 9.83 9.83 2.54 3 1 1 0 1046.1748 3055.5407 S603s N612n TMT10 600 (K) ALGsNDPMQSILnSLEQQHEEEK (R) ALGS(0.99)N(0.0)DPMQS(0.0)ILN(0.99)S(0.0)LEQQHEEEK K:TMT10,s:Phosphorylated S,n:Deamidated KIF13B 204097.3 2 2 335.1 355.82 HUMAN 1 -3.3743 12.8926 VTMSNDVSEEESEEE-p O75607;S147-p VTMSNDVSEEESEEE 0.295408715152096 0.824898780665274 -0.21 -0.0226666666666666 9.970772942551 1.17077378272499 -0.21 -0.0226666666666666 0.100675247452406 0.763699703035861 -1.97663315121787 -0.316151303938658 O75607 NPM3 O75607.S147.p_NPM3 O75607_S147sS151sS158s_3_3_147_158 O75607 O75607 Nucleoplasmin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27305.27305.4 30.22 30.22 3.312 5 3 3 0 1308.3237 4990.38 S147s S151s S158s TMT10 137 (R) HQIVTMSNDVsEEEsEEEEEDsDEEEVELCPILPAKK (Q) HQIVT(0.0)MS(0.0)NDVS(0.99)EEES(0.99)EEEEEDS(0.99)DEEEVELCPILPAKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S NPM3 19628.6 8 3 2964.1 64.53 HUMAN 1 -9.9708 -1.1708 VTNHEDGSPVNEPNE-p O15394;S786-p VTNHEDGSPVNEPNE 0.918430174900821 0.0105276765034828 -0.0166666666666667 0.498 0.720783670762822 27.7475105748512 -0.0166666666666667 0.498 0.847074548405115 0.00167976660345221 -0.202294779747178 5.76676564115596 O15394 NCAM2 O15394.S786.p_NCAM2 O15394_S786s_1_1_786_786 O15394 O15394|H9KV31 Neural cell adhesion molecule 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17344.17344.4 18.86 18.86 1.21 5 1 1 0 1103.812 4331.2498 S786s N789n Hydrogen 779 (R) VTNHEDGsPVnEPNETTPLTEPEKLPLKEEDGK (E) VT(0.0)N(0.0)HEDGS(0.99)PVN(0.99)EPN(0.0)ET(0.0)T(0.0)PLT(0.0)EPEKLPLKEEDGK K:TMT10-Lys-Only,s:Phosphorylated S,n:Deamidated NCAM2 93843.3 6 3 1267.1 160.16 HUMAN 1 -0.7208 27.7475 VTPDIEESLLEPENE-p Q14151;S207-p VTPDIEESLLEPENE 0.355294323761414 0.386120128764829 0.130333333333333 0.0996666666666667 8.35093188392251 5.49439282249965 0.130333333333333 0.0996666666666667 0.146186346261354 0.282202409645342 1.69598984813181 1.19367437487054 Q14151 SAFB2 Q14151.S207.p_SAFB2 Q14151_S207s _1_1_207_207 Q14151 Q14151 Scaffold attachment factor B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25271.25271.3 15.22 15.22 8.556 2 1 1 0 794.0697 2300.2273 S207s TMT10 200 (K) VTPDIEEsLLEPENEK (I) VT(0.0)PDIEES(0.99)LLEPENEK K:TMT10,s:Phosphorylated S SAFB2 107985.1 2 4 83.3 629.62 HUMAN 1 8.3509 5.4944 VTPKRSHSPSIDGTP-p Q9BWT3;S648-p VTPKRSHSPSIDGTP 0.521309922362563 0.288008760433732 0.0966666666666667 0.144666666666667 5.23145993066728 7.13291950059649 0.0966666666666667 0.144666666666667 0.299815448557959 0.19351206613686 1.14631017954332 1.48384281406487 Q9BWT3 PAPOLG Q9BWT3.S648.p_PAPOLG Q9BWT3_S648s _1_1_648_648 Q9BWT3 Q9BWT3|Q9BWT3-2 Poly(A) polymerase gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4637.4637.3 8.09 8.09 1.137 4 1 1 0 607.321 1739.9805 S648s TMT10 645 (K) RSHsPSIDGTPK (R) RS(0.0)HS(0.99)PS(0.0)IDGT(0.0)PK K:TMT10,s:Phosphorylated S PAPOLG 83143.5 4 4 3896.1 41.17 HUMAN 1 5.2315 7.1329 VTPRTCNSPQNSTDS-p Q14694;S211-p VTPRTCNSPQNSTDS 0.347343656997277 0.718439699446438 0.134666666666667 0.0426666666666667 8.53295094894353 1.97743282942354 0.134666666666667 0.0426666666666667 0.140186084291862 0.634244510564621 1.72751210746379 0.503740314095129 Q14694 USP10 Q14694.S211.p_USP10 Q14694_S211s _1_1_211_211 Q14694 Q14694|Q14694-2|Q14694-3 Ubiquitin carboxyl-terminal hydrolase 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26559.26559.3 25.64 25.64 2.167 9 1 1 0 1144.1848 3350.5644 S211s TMT10 208 (R) TCNsPQNSTDSVSDIVPDSPFPGALGSDTR (T) T(0.0)CNS(0.99)PQNS(0.0)T(0.0)DS(0.0)VS(0.0)DIVPDS(0.0)PFPGALGS(0.0)DT(0.0)R C:Carbamidomethylation,s:Phosphorylated S USP10 87759.8 16 7 358.1 346.34 HUMAN 1 8.533 1.9774 VTPVTGASLRRTMLL-p P55265-4;S857-p VTPVTGASLRRTMLL 0.251354731881757 0.63248343371749 -0.182333333333333 0.0736666666666667 11.4417873415988 2.703399643525 -0.182333333333333 0.0736666666666666 0.0717498943370862 0.536611574067394 -2.23369603491252 0.659410127613412 P55265 ADAR P55265.4.S857.p_ADAR P55265-4_S857s _1_1_857_857 P55265-4 P55265-4|P55265-5 Isoform 4 of Double-stranded RNA-specific adenosine deaminase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19269.19269.3 10.03 10.03 2 4 1 1 0 677.6827 1951.0632 S857s TMT10 845 (R) MGFTEVTPVTGAsLRR (T) MGFT(0.0)EVT(0.0)PVT(0.0)GAS(0.99)LRR s:Phosphorylated S ADAR 142147.5 1 14 584.1 265.43 HUMAN 1 -11.4418 2.7034 VTQATQTSPGVPWPS-p A0JNW5;S1402-p VTQATQTSPGVPWPS 0.873152286137269 0.550675226370219 -0.023 -0.0753333333333333 1.15306043934434 3.48826704453538 -0.023 -0.0753333333333333 0.766820926192438 0.447891989853076 -0.311843304411285 -0.817827891930944 A0JNW5 UHRF1BP1L A0JNW5.S1402.p_UHRF1BP1L A0JNW5_S1402s _1_1_1402_1402 A0JNW5 A0JNW5|A0A0C4DGH6 UHRF1-binding protein 1-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.34583.34583.3 24.63 24.63 1.15 9 1 1 0 1209.2368 3545.7175 S1402s TMT10 1394 (R) SVTQATQTsPGVPWPSQSANFPEFSFDFTR (E) S(0.0)VT(0.0)QAT(0.0)QT(0.0)S(0.99)PGVPWPS(0.0)QS(0.0)ANFPEFS(0.0)FDFT(0.0)R s:Phosphorylated S UHRF1BP1L 165621.9 9 17 398.1 328.88 HUMAN 1 -1.1531 -3.4883 VTQPRRISAVSVAER-p Q08211;S449-p VTQPRRISAVSVAER 0.386906109244301 0.00739033881289099 -0.124666666666667 0.561666666666667 7.63226926435271 30.4758180073494 -0.124666666666667 0.561666666666667 0.172493634717231 0.000896227362801795 -1.57129624099516 6.56758069988241 Q08211 DHX9 Q08211.S449.p_DHX9 Q08211_S449s _1_1_449_449 Q08211 Q08211 ATP-dependent RNA helicase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9446.9446.3 9.58 9.58 4.828 2 1 1 0 466.2557 1316.7848 S449s TMT10 447 (R) RIsAVSVAER (V) RIS(0.99)AVS(0.0)VAER s:Phosphorylated S DHX9 142268.2 2 5 1186.1 168.77 HUMAN 1 -7.6323 30.4758 VTQPRTNTPVKEDWN-p P78347;T558-p VTQPRTNTPVKEDWN 0.742536051881756 0.00134331567963069 0.061 -1.079 2.45561494726746 46.6876094883006 0.061 -1.079 0.568117942158366 2.14407044920861e-05 0.607493711061102 -13.5909162634087 P78347 GTF2I P78347.T558.p_GTF2I P78347_T558t _1_1_558_558 P78347 P78347|P78347-3|P78347-4|P78347-2 General transcription factor II-I HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12517.12517.3 13.79 8.78 2.103 2 1 1 0 666.3464 1917.0594 T558t TMT10 556 (R) TNtPVKEDWNVR (I) T(0.0)NT(0.99)PVKEDWNVR K:TMT10,t:Phosphorylated T GTF2I 112927.8 4 7 140.1 523.54 HUMAN 1 2.4556 -46.6876 VTQVDGNSPVRFSTE-p B0YIW6;S534-p VTQVDGNSPVRFSTE 0.909693935942033 0.208852488679825 -0.0266666666666667 -0.125666666666667 0.80697583482074 8.94702951547921 -0.0266666666666666 -0.125131005793593 0.830428826843222 0.127437442876847 -0.224733951961292 -1.79855047320986 B0YIW6 NotFound B0YIW6.S534.p_NotFound B0YIW6_S534s _1_1_534_534 B0YIW6 B0YIW6|P48444|P48444-2 Archain 1, isoform CRA_a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8325.8325.2 10.73 10.73 5.235 2 1 1 0 740.8716 1400.7695 S534s TMT10 527 (K) VTQVDGNsPVR (F) VT(0.0)QVDGNS(0.99)PVR s:Phosphorylated S ARCN1 62195.8 1 7 1797.1 114.24 HUMAN 1 -0.807 -8.947 VTQVSSAYQKTVPVE-p Q14247-2;Y297-p VTQVSSAYQKTVPVE 0.345145936751337 0.305259630703203 0.224666666666667 -0.159 8.58394871799981 6.80666721836646 0.224666666666667 -0.159 0.138549552756331 0.208609113811532 1.73634177967919 -1.42674374140216 Q14247 CTTN Q14247.2.Y297.p_CTTN Q14247-2_Y297y _1_1_297_297 Q14247-2 Q14247-2|Q14247-3 Isoform 2 of Src substrate cortactin GG20160819_MSz_CCLE_T4D7_pY_Injection_01.20387.20387.3 24.45 24.45 1.604 6 1 1 0 805.0603 2333.2025 Y297y TMT10 283 (K) NASTFEDVTQVSSAyQK (T) NAS(0.0)T(0.0)FEDVT(0.0)QVS(0.0)S(0.0)AY(0.99)QK K:TMT10,y:Phosphorylated Y CTTN 71641.9 1 2 63.1 36.84 HUMAN 1 8.5839 -6.8067 VTQVTEQSPKVQSRY-p Q14966;S128-p VTQVTEQSPKVQSRY 0.690001442222247 0.021045775789504 -0.0576666666666667 -0.324333333333333 3.01996633978564 22.9317637621316 -0.0576666666666667 -0.324333333333333 0.498888354104551 0.00509124062970104 -0.724464777212846 -4.53325719515318 Q14966 ZNF638 Q14966.S128.p_ZNF638 Q14966_S128s _1_1_128_128 Q14966 Q14966|Q14966-3|Q14966-4 Zinc finger protein 638 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9491.9491.2 17.79 10.88 3.238 5 1 1 0 979.0053 1877.038 S128s TMT10 118 (K) QSSVTQVTEQsPK (V) QS(0.0)S(0.0)VT(0.0)QVT(0.0)EQS(0.99)PK K:TMT10,s:Phosphorylated S ZNF638 222047.2 4 1 165.1 494.68 HUMAN 1 -3.02 -22.9318 VTRERKNSITEISDN-p Q86UU1;S578-p VTRERKNSITEISDN 0.0779032978980235 0.370560861569132 -0.381333333333333 -0.136 23.6833125456077 5.71826377838145 -0.381333333333333 -0.136 0.00428221773149505 0.268023961632674 -4.71784526662317 -1.23392679617944 Q86UU1 PHLDB1 Q86UU1.S578.p_PHLDB1 Q86UU1_S578s _1_1_578_578 Q86UU1 Q86UU1|Q86UU1-2|Q86UU1-3 Pleckstrin homology-like domain family B member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15612.15612.4 17.52 17.52 2.305 4 1 1 0 747.1246 2905.5056 S578s TMT10 576 (R) KNsITEISDNEDDLLEYHRR (Q) KNS(0.99)IT(0.0)EIS(0.0)DNEDDLLEY(0.0)HRR K:TMT10,s:Phosphorylated S PHLDB1 152129.1 2 18 99.1 600.41 HUMAN 1 -23.6833 -5.7183 VTRNLGESPTGSAES-p P51788;S712-p VTRNLGESPTGSAES 0.77293343908683 0.0886642515243664 0.0606666666666667 -0.203666666666667 2.13814691972322 13.926407935202 0.0606666666666667 -0.203666666666667 0.611202761854776 0.0404910656251075 0.539182878292763 -2.67782064609034 P51788 CLCN2 P51788.S712.p_CLCN2 P51788_S712s _1_1_712_712 P51788 P51788|P51788-3|P51788-5|P51788-4 Chloride channel protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17689.17689.2 12.46 12.46 1.566 4 1 1 0 1020.0048 1959.0345 S712s TMT10 708 (R) NLGEsPTGSAESAGIALR (S) NLGES(0.99)PT(0.0)GS(0.0)AES(0.0)AGIALR s:Phosphorylated S CLCN2 99503.6 2 5 1767.1 116.44 HUMAN 1 2.1381 -13.9264 VTSKLPNSVLGKIWK-p Q9H223;S482-p VTSKLPNSVLGKIWK 0.0241132206334896 0.0425780247418708 -0.713666666666667 -0.416333333333333 37.4811469310056 18.3641428079339 -0.713666666666667 -0.416333333333333 0.000178601584252711 0.0145742333639305 -9.07338045382117 -3.53337256846268 Q9H223 EHD4 Q9H223.S482.p_EHD4 Q9H223_S482s _1_1_482_482 Q9H223 Q9H223 EH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21214.21214.3 15.15 15.15 3.859 3 1 1 0 757.4319 2190.3135 S482s TMT10 473 (K) EMVTSKLPNsVLGK (I) EMVT(0.0)S(0.0)KLPNS(0.99)VLGK K:TMT10,s:Phosphorylated S EHD4 61402.2 3 7 1561.1 131.45 HUMAN 1 -37.4811 -18.3641 VTTSKIVTDSDSKTE-p Q9H2G2;T814-p VTTSKIVTDSDSKTE 0.628485707296744 0.735504610303935 0.074 -0.0366666666666666 3.74833218497896 1.83939513519182 0.074 -0.0366666666666666 0.421858478046096 0.654727355046035 0.868706647531065 -0.472880364858366 Q9H2G2 SLK Q9H2G2.T814.p_SLK Q9H2G2_T814t _1_1_814_814 Q9H2G2 Q9H2G2|Q9H2G2-2 STE20-like serine/threonine-protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.13726.13726.2 10.62 10.62 1.159 4 1 1 0 1016.0206 1951.0748 T814t TMT10 812 (K) IVtDSDSKTEELR (F) IVT(0.99)DS(0.0)DS(0.0)KT(0.0)EELR K:TMT10,t:Phosphorylated T SLK 143320 2 15 329.1 359.67 HUMAN 1 3.7483 -1.8394 VTVARQASLPGSPQA-p O15018;S944-p VTVARQASLPGSPQA 0.335562821657445 0.779280894838649 -0.132 -0.0313333333333333 8.84622705639194 1.50067517515716 -0.132 -0.0313333333333333 0.130429939959312 0.707835732271353 -1.78174439902631 -0.395103917234311 O15018 PDZD2 O15018.S944.p_PDZD2 O15018_S944s _1_1_944_944 O15018 O15018|O15018-2 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.20707.20707.3 12.46 12.46 1.181 2 1 1 0 709.7275 2047.1974 S944s TMT10 942 (R) QAsLPGSPQALRNPLLR (Q) QAS(0.99)LPGS(0.0)PQALRNPLLR s:Phosphorylated S PDZD2 304146 3 9 85.1 628.64 HUMAN 1 -8.8462 -1.5007 VTVSRERSVPRGPSN-p Q5M775;S120-p VTVSRERSVPRGPSN 0.971306772393636 0.0566232908062566 -0.011 -0.371333333333333 0.247190394099736 16.6192763849046 -0.011 -0.371333333333333 0.944671820537469 0.0217807264939128 -0.0726797854188973 -3.18565981188 Q5M775 SPECC1 Q5M775.S120.p_SPECC1 Q5M775_S120s _1_1_120_120 Q5M775 Q5M775|Q5M775-4|Q5M775-2|Q5M775-3|Q5M775-5 Cytospin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.4908.4908.4 9.3 9.3 9.298 2 1 1 0 433.9971 1652.996 S120s TMT10 120 (R) sVPRGPSNPRK (S) S(0.99)VPRGPS(0.0)NPRK K:TMT10,s:Phosphorylated S SPECC1 119267.5 1 2 330.1 358.68 HUMAN 1 -0.2472 -16.6193 VTVVAPQSPTFQANG-p P49757;S361-p VTVVAPQSPTFQANG 0.0948890980790693 0.00425039176962222 -0.354333333333333 0.574 21.7098282487224 34.8654581875516 -0.354333333333333 0.574 0.00674554703915595 0.000326177636322085 -4.2558879864078 8.04481486733295 P49757 NUMB P49757.S361.p_NUMB P49757_S361s _1_1_361_361 P49757 P49757|P49757-3 Protein numb homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.25986.25986.4 20.57 20.57 2.391 5 1 1 0 805.9279 3140.7145 S361s TMT10 353 (K) PVTVVAPQsPTFQANGTDSAFHVLAK (P) PVT(0.0)VVAPQS(0.99)PT(0.0)FQANGT(0.0)DS(0.0)AFHVLAK K:TMT10,s:Phosphorylated S NUMB 71487.2 1 5 538.1 277.23 HUMAN 1 -21.7098 34.8655 VTYAEKLSPLTGQAC-p Q9UKA4;S1580-p VTYAEKLSPLTGQAC 0.125098644620753 0.00689975076891678 -0.366666666666667 -0.721666666666667 18.7792666661232 30.9910906793273 -0.366666666666667 -0.721666666666667 0.0132456517757388 0.000795959429499243 -3.62172700511275 -6.72829370935431 Q9UKA4 AKAP11 Q9UKA4.S1580.p_AKAP11 Q9UKA4_S1580s _1_1_1580_1580 Q9UKA4 Q9UKA4 A-kinase anchor protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15347.15347.3 12.82 12.82 1.161 4 1 1 0 701.6884 2023.0844 S1580s Hydrogen 1573 (R) VTYAEKLsPLTGQACR (Y) VT(0.0)Y(0.0)AEKLS(0.99)PLT(0.0)GQACR K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S AKAP11 213075.9 4 13 688.1 243.29 HUMAN 1 -18.7793 -30.9911 VTYLELLS_______-p Q9NR46;S395-p VTYLELLS_______ 0.642910629713767 0.656181096410971 -0.0866666666666667 0.079 3.58610537014949 2.50097822977194 -0.0866666666666667 0.079 0.43791463856449 0.56221467447289 -0.837137511870754 0.617017128885818 Q9NR46 SH3GLB2 Q9NR46.S395.p_SH3GLB2 Q9NR46_S395s _1_1_395_395 Q9NR46 Q9NR46-2|B7ZC38|B7ZC39 Endophilin-B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29393.29393.2 19.45 14.05 16.818 3 1 1 0 929.0313 1777.0875 S395s TMT10 384 (K) GKVPVTYLELLs (-) GKVPVT(0.0)Y(0.0)LELLS(0.99) K:TMT10,s:Phosphorylated S SH3GLB2 44201.3 3 4 2345.1 87.15 HUMAN 1 -3.5861 2.501 VVAAGTLSPPGPEEA-p P27987;S120-p VVAAGTLSPPGPEEA 0.578846851201194 0.427127081972133 0.0803333333333333 0.091 4.36781709789643 4.91687355944446 0.0803333333333333 0.091 0.365778597365006 0.322338843986468 0.986817016411246 1.0885855788916 P27987 ITPKB P27987.S120.p_ITPKB P27987_S120s _1_1_120_120 P27987 P27987 Inositol-trisphosphate 3-kinase B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.17138.17344.3 17.77 17.77 1.244 2 1 1 0 773.0789 2237.2542 S120s TMT10 111 (R) QQVVAAGTLsPPGPEEAK (R) QQVVAAGT(0.0)LS(0.99)PPGPEEAK K:TMT10,s:Phosphorylated S ITPKB 103230.2 1 4 424.1 319.61 HUMAN 1 4.3678 4.9169 VVALGRCSLRTLSRC-p Q9P206-3;S325-p VVALGRCSLRTLSRC 0.904165101627201 0.416873361921573 0.019 -0.102333333333333 0.86045839608988 5.0541079532026 0.019 -0.102333333333333 0.820264961121681 0.312312383424702 0.238500059986564 -1.1137373271002 Q9P206 KIAA1522 Q9P206.3.S325.p_KIAA1522 Q9P206-3_S325s _1_1_325_325 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.27802.27802.4 21.17 21.17 1.655 2 1 1 0 673.8792 2612.5272 S325s TMT10 306 (K) LIPHAVLPPTVDVVALGRCsLR (T) LIPHAVLPPT(0.0)VDVVALGRCS(0.99)LR C:Carbamidomethylation,s:Phosphorylated S KIAA1522 108782.6 2 12 62.1 704.36 HUMAN 1 0.8605 -5.0541 VVAQEALSAQKEIYQ-p Q8IX03-2;S108-p VVAQEALSAQKEIYQ 0.223122749971548 0.0502254217774247 -0.272333333333333 -0.268666666666667 12.5262715879553 17.3616922215838 -0.272333333333333 -0.268666666666667 0.055894984647757 0.0183582287848484 -2.42604363133039 -3.33160973779045 Q8IX03 WWC1 Q8IX03.2.S108.p_WWC1 Q8IX03-2_S108s _1_1_108_108 Q8IX03-2 Q8IX03-2 Isoform 2 of Protein KIBRA HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.27275.27275.3 12.72 11.79 12.717 2 1 1 0 691.7053 1993.137 S108s TMT10 98 (K) DYLVVAQEALsAQK (E) DY(0.0)LVVAQEALS(0.99)AQK K:TMT10,s:Phosphorylated S WWC1 126701.1 1 1 312.1 370.85 HUMAN 1 -12.5263 -17.3617 VVAQSRISFPEKELL-p Q9Y4B6;S844-p VVAQSRISFPEKELL 0.168689953351787 0.0135649676192373 -0.264666666666667 -0.388666666666667 15.4267750263677 25.9549105921959 -0.264666666666667 -0.388666666666667 0.0286630563425009 0.00253810123708179 -2.95888302772407 -5.28283904361918 Q9Y4B6 VPRBP Q9Y4B6.S844.p_VPRBP Q9Y4B6_S844s _1_1_844_844 Q9Y4B6 Q9Y4B6|Q9Y4B6-2|Q9Y4B6-3 DDB1- and CUL4-associated factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19303.19303.3 11.1 11.1 1.347 2 1 1 0 695.7131 2005.1482 S844s TMT10 835 (K) ADVVAQSRIsFPEK (E) ADVVAQS(0.0)RIS(0.99)FPEK K:TMT10,s:Phosphorylated S DCAF1 170772.9 1 5 1102.1 177.43 HUMAN 1 -15.4268 -25.9549 VVASKENSAEDLLRL-p O15018;S421-p VVASKENSAEDLLRL 0.762516309773055 0.65329640876852 0.0473333333333333 -0.0776666666666666 2.25539505839959 2.52538951058914 0.0473333333333333 -0.0776666666666667 0.594922636827762 0.559063383973826 0.564646615526558 -0.622167768185267 O15018 PDZD2 O15018.S421.p_PDZD2 O15018_S421s _1_1_421_421 O15018 O15018 PDZ domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.14512.14512.2 12.24 3.25 99 1 1 1 0 678.3245 1275.6742 S421s TMT10 419 (K) ENsAEDLLR (L) ENS(1.0)AEDLLR s:Phosphorylated S PDZD2 304146 2 2 85.1 628.64 HUMAN 1 2.2554 -2.5254 VVASPRASPAKQRGP-p Q13049;S339-p VVASPRASPAKQRGP 0.34842690082331 0.136367069243572 0.155 -0.326333333333333 8.50879963290665 11.4010745024351 0.155 -0.326333333333333 0.140967837226501 0.0724256747133244 1.72333030641369 -2.22548360649987 Q13049 TRIM32 Q13049.S339.p_TRIM32 Q13049_S335sS339s_2_2_335_339 Q13049 Q13049 E3 ubiquitin-protein ligase TRIM32 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18882.18882.4 10.23 10.23 1.232 3 2 2 0 663.0578 2489.278 S335s S339s TMT10 324 (R) EMDMSPEEVVAsPRAsPAK (Q) EMDMS(0.0)PEEVVAS(0.99)PRAS(0.99)PAK K:TMT10,s:Phosphorylated S TRIM32 73584.8 3 5 2980.1 64.18 HUMAN 1 8.5088 -11.4011 VVDCGTGYTKLGYAG-p P61158;Y16-p VVDCGTGYTKLGYAG 0.219777311273446 0.393830996637763 0.458 -0.201333333333333 12.6641199826263 5.38017241013071 0.458 -0.201333333333333 0.0541486959075431 0.289722856863196 2.45071561492508 -1.17304026212633 P61158 ACTR3 P61158.Y16.p_ACTR3 P61158_Y16y _1_1_16_16 P61158 P61158|F8WE84|F8WEW2 Actin-related protein 3 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.19803.19803.3 21.47 21.47 4.193 3 1 1 0 726.0079 2096.0466 Y16y Acetyl 2 (M) AGRLPACVVDCGTGyTK (L) AGRLPACVVDCGT(0.0)GY(0.99)T(0.0)K C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y ACTR3 47826.7 1 1 156.1 21.47 HUMAN 1 12.6641 -5.3802 VVDEMPRSADLPHSF-p F8VWL3;S839-p VVDEMPRSADLPHSF 0.0626849711829956 0.00336103056796218 -0.476666666666667 -0.678666666666667 26.1485401341339 37.0014370958302 -0.476666666666667 -0.678666666666667 0.00242742592877737 0.00019946021848242 -5.34067268789219 -8.86105945865626 F8VWL3 NotFound F8VWL3.S839.p_NotFound F8VWL3_S839s _1_1_839_839 F8VWL3 F8VWL3|E9PJX4|B7Z493|Q96M96|F8W1R0 FYVE, RhoGEF and PH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.33581.33581.5 22.66 22.66 6.559 4 1 1 0 679.5614 3313.8019 S839s TMT10 822 (R) AQATIPLLGYVVDEMPRsADLPHSFK (L) AQAT(0.0)IPLLGY(0.0)VVDEMPRS(0.99)ADLPHS(0.0)FK K:TMT10,s:Phosphorylated S FGD4 102143.9 2 4 2482.1 81.7 HUMAN 1 -26.1485 -37.0014 VVDESDETENQEEKA-p O75717;T1093-p VVDESDETENQEEKA 0.10941212959015 0.0243971422756914 -0.530666666666667 -0.354333333333333 20.1232656476946 21.9633704385986 -0.530666666666667 -0.354333333333333 0.00972016048081601 0.00636301513345367 -3.90545458008496 -4.3090112207982 O75717 WDHD1 O75717.T1093.p_WDHD1 O75717_T1093t _1_1_1093_1093 O75717 O75717|O75717-2 WD repeat and HMG-box DNA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7586.7586.3 14.36 14.36 1.152 2 1 1 0 782.3686 2265.1247 T1093t TMT10 1085 (K) RVVDESDEtENQEEK (A) RVVDES(0.0)DET(0.99)ENQEEK K:TMT10,t:Phosphorylated T WDHD1 127448.5 1 15 554.1 273.24 HUMAN 1 -20.1233 -21.9634 VVDKKRLSKLEPEPN-p Q9P2W9;S167-p VVDKKRLSKLEPEPN 0.53706412572523 0.0814348975501825 -0.146666666666667 -0.221333333333333 4.99391840223924 14.440869788419 -0.146666666666667 -0.221333333333333 0.316670902489506 0.0359677293145818 -1.10294349732072 -2.77250167764263 Q9P2W9 STX18 Q9P2W9.S167.p_STX18 Q9P2W9_S167s _1_1_167_167 Q9P2W9 Q9P2W9|D6RF48 Syntaxin-18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12656.12656.4 9.75 9.75 6.493 2 1 1 0 545.5672 2099.2792 S167s TMT10 165 (K) RLsKLEPEPNTK (T) RLS(0.99)KLEPEPNT(0.0)K K:TMT10,s:Phosphorylated S STX18 38844 1 3 2491.1 81.28 HUMAN 1 -4.9939 -14.4409 VVDVKCHSHSPFRNE-p Q8NEV8;S963-p VVDVKCHSHSPFRNE 0.791939334471681 0.00985022343060253 0.041 -1.322 1.95394588115076 28.2367459056798 0.041 -1.322 0.637683840769037 0.00150080894480128 0.498578697535855 -5.90443649181124 Q8NEV8 EXPH5 Q8NEV8.S963.p_EXPH5 Q8NEV8_S963s _1_1_963_963 Q8NEV8 Q8NEV8|Q8NEV8-2 Exophilin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.3051.3051.4 8.9 8.9 1.209 2 1 1 0 434.6975 1655.8022 S963s TMT10 961 (K) CHsHSPFRNER (G) CHS(0.99)HS(0.0)PFRNER C:Carbamidomethylation,s:Phosphorylated S EXPH5 223884.5 2 14 129.1 537.25 HUMAN 1 1.9539 -28.2367 VVDVKTCSIDNKLQD-p Q8TEP8-3;S883-p VVDVKTCSIDNKLQD 0.178192032877632 0.00996313744771987 -0.228 -0.419 14.7969127821668 28.123807575954 -0.228 -0.419 0.0331366592430982 0.00154034939524239 -2.84044807085826 -5.87243454601482 Q8TEP8 NotFound Q8TEP8.3.S883.p_NotFound Q8TEP8-3_S883s _1_1_883_883 Q8TEP8-3 Q8TEP8-3|A0A0A0MR42|Q8TEP8-2 Isoform 3 of Centrosomal protein of 192 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.16923.16923.3 11.17 11.17 1.103 2 1 1 0 868.4372 2523.3328 S883s TMT10 881 (K) TCsIDNKLQDVGNDEK (A) T(0.0)CS(0.99)IDNKLQDVGNDEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S CEP192 281787.5 1 9 491.1 293.99 HUMAN 1 -14.7969 -28.1238 VVEKQNLSKEELIAE-p A0A2C9F2M7;S37-p VVEKQNLSKEELIAE 0.356011239517393 0.262231345054454 0.130666666666667 -0.145666666666667 8.33778756686933 7.65874909802133 0.130666666666667 -0.145666666666667 0.146629462747302 0.171445105114881 1.69371291626254 -1.57542343395124 A0A2C9F2M7 NotFound A0A2C9F2M7.S37.p_NotFound A0A2C9F2M7_S37s _1_1_37_37 A0A2C9F2M7 O43175|A0A2C9F2M7|A0A286YF22|A0A286YFA2|A0A286YFL2|A0A286YFB2|A0A286YFC8|A0A286YER3 D-3-phosphoglycerate dehydrogenase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.30365.30365.4 17.59 17.59 99 1 1 1 0 749.6455 2915.5912 S37s TMT10 34 (K) QNLsKEELIAELQDCEGLIVR (S) QNLS(1.0)KEELIAELQDCEGLIVR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PHGDH 56909.6 3 2 1205.1 166.89 HUMAN 1 8.3378 -7.6587 VVELRINSGGKLPNF-p Q13283;S373-p VVELRINSGGKLPNF 0.278859043149947 0.0515803938656975 -0.191333333333333 -0.243333333333333 10.4857985905348 17.1821258243324 -0.191333333333333 -0.243333333333333 0.0894170094791195 0.0191331914682123 -2.06625136690231 -3.29604728578171 Q13283 G3BP1 Q13283.S373.p_G3BP1 Q13283_S373s _1_1_373_373 Q13283 Q13283 Ras GTPase-activating protein-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.31935.31935.4 17.82 15.58 8.327 2 1 1 0 816.1885 3181.7501 S373s TMT10 371 (R) INsGGKLPNFGFVVFDDSEPVQK (V) INS(0.99)GGKLPNFGFVVFDDS(0.0)EPVQK K:TMT10,s:Phosphorylated S G3BP1 52220.4 2 10 1003.1 189.39 HUMAN 1 -10.4858 -17.1821 VVELRPPSRSRSTSS-p Q9P1Y6;S991-p VVELRPPSRSRSTSS 0.416694906313078 0.459967434283603 0.113 0.133 7.01559786220181 4.49734940749208 0.113 0.133 0.19881091027737 0.355030005562362 1.46374326027572 1.01089505101612 Q9P1Y6 PHRF1 Q9P1Y6.S991.p_PHRF1 Q9P1Y6_S991s _1_1_991_991 Q9P1Y6 Q9P1Y6|Q9P1Y6-3|A0A0J9YWD5|A0A0J9YYB5|F8WEF5|B7ZM65|E9PJ24|Q9P1Y6-2|A0A0J9YX88 PHD and RING finger domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.12984.12984.3 11.64 11.64 99 1 1 1 0 454.5884 1281.784 S991s TMT10 984 (R) VVELRPPsR (S) VVELRPPS(1.0)R s:Phosphorylated S PHRF1 180374.6 2 13 438.1 312.23 HUMAN 1 7.0156 4.4973 VVEPGPPSAKRPKLS-p Q09472;S12-p VVEPGPPSAKRPKLS 0.570077724941009 0.534549455058104 -0.085 -0.0683333333333333 4.49141136181918 3.65887320748408 -0.085 -0.0683333333333334 0.355515764967165 0.430638326647583 -1.00997287429486 -0.851198777770561 Q09472 EP300 Q09472.S12.p_EP300 Q09472_S12s _1_1_12_12 Q09472 Q09472 Histone acetyltransferase p300 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15870.15870.3 11.45 11.45 99 1 1 1 0 549.2742 1565.8373 S12s Acetyl 2 (M) AENVVEPGPPsAK (R) AENVVEPGPPS(1.0)AK K:TMT10,s:Phosphorylated S EP300 267066 2 1 591.2 264.37 HUMAN 1 -4.4914 -3.6589 VVESPDFSKDEDYLG-p Q9Y6Y8;S930-p VVESPDFSKDEDYLG 0.24047106331053 0.00539147169776956 -0.210333333333333 -0.548666666666667 11.830908194589 32.9211367799179 -0.210333333333333 -0.548666666666667 0.0656008067857686 0.000510371391119917 -2.30237786957484 -7.3593433787167 Q9Y6Y8 SEC23IP Q9Y6Y8.S930.p_SEC23IP Q9Y6Y8_S930s _1_1_930_930 Q9Y6Y8 Q9Y6Y8 SEC23-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22159.22159.3 14.51 14.51 2.879 3 1 1 0 865.7798 2515.3535 S930s TMT10 923 (K) VVESPDFsKDEDYLGK (V) VVES(0.0)PDFS(0.99)KDEDY(0.0)LGK K:TMT10,s:Phosphorylated S SEC23IP 111759.1 2 7 1985.1 104.07 HUMAN 1 -11.8309 -32.9211 VVGFWNPSEENCGVD-p Q9UPY3;S1531-p VVGFWNPSEENCGVD 0.886118944763575 0.63248343371749 0.0313333333333333 0.0566666666666667 1.02618344377399 2.70333219730955 0.0313333333333333 0.0566666666666667 0.789553668288107 0.536619907744744 0.280433434181489 0.659396119303469 Q9UPY3 DICER1 Q9UPY3.S1531.p_DICER1 Q9UPY3_S1531s _1_1_1531_1531 Q9UPY3 Q9UPY3|Q9UPY3-2|Q9UPY3-3 Endoribonuclease Dicer HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.31289.31289.3 18.68 18.68 8.241 2 1 1 0 1113.5052 3258.5301 S1531s TMT10 1517 (K) AVEEDDFVVGFWNPsEENCGVDTGK (Q) AVEEDDFVVGFWNPS(0.99)EENCGVDT(0.0)GK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DICER1 221416.1 4 9 942.1 197.99 HUMAN 1 1.0262 2.7033 VVGGCQEYTGAPYFA-p Q8IW45-2;Y85-p VVGGCQEYTGAPYFA 0.383105758171724 0.00627523220229034 0.149333333333333 0.591666666666667 7.71305826902131 31.717447014715 0.149333333333333 0.591666666666667 0.169314508053507 0.000673372379615072 1.58534081275231 6.96029147221614 Q8IW45 CARKD Q8IW45.2.Y85.p_CARKD Q8IW45-2_Y85y _1_1_85_85 Q8IW45-2 Q8IW45-2 Isoform 2 of ATP-dependent (S)-NAD(P)H-hydrate dehydratase GG20160819_MSz_CCLE_T4D7_pY_Injection_01.41668.41745.3 27.73 22.13 4.244 4 1 1 0 970.836 2830.5214 Y85y TMT10 76 (R) IGVVGGCQEyTGAPYFAAISALK (V) IGVVGGCQEY(0.99)T(0.0)GAPY(0.0)FAAIS(0.0)ALK C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y NAXD 41645 2 1 106.1 27.73 HUMAN 1 7.7131 31.7174 VVGRNGESSELDLQG-p Q9Y2B0;S115-p VVGRNGESSELDLQG 0.996516649274227 0.107030837026898 -0.000666666666666672 0.171333333333333 0.0269636955175188 12.8218801062127 -0.000666666666666675 0.171333333333333 0.993810613322753 0.0522170087172303 -0.00812209084209634 2.47768247477838 Q9Y2B0 CNPY2 Q9Y2B0.S115.p_CNPY2 Q9Y2B0_S115s _1_1_115_115 Q9Y2B0 Q9Y2B0 Protein canopy homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.25927.25927.3 10.61 10.61 1.149 5 1 1 0 995.8461 2905.5519 S115s TMT10 112 (R) NGEsSELDLQGIRIDSDISGTLK (F) NGES(0.99)S(0.0)ELDLQGIRIDS(0.0)DIS(0.0)GT(0.0)LK K:TMT10,s:Phosphorylated S CNPY2 20994.2 2 1 6070.1 14.24 HUMAN 1 -0.027 12.8219 VVICPDASLEDAKKE-p Q99497;S57-p VVICPDASLEDAKKE 0.517157142456752 0.0671223620868272 0.110333333333333 0.205333333333333 5.28801524542974 15.6029998338422 0.110333333333333 0.205333333333333 0.295936460680146 0.0275232691182117 1.1565862013472 2.99027967229002 Q99497 PARK7 Q99497.S57.p_PARK7 Q99497_S57s _1_1_57_57 Q99497 Q99497|K7ELW0 Protein/nucleic acid deglycase DJ-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.19029.19029.3 10.94 10.94 99 1 1 1 0 809.7668 2347.3146 S57s TMT10 49 (R) DVVICPDAsLEDAKK (E) DVVICPDAS(1.0)LEDAKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PARK7 20061.9 1 1 4434.1 31.45 HUMAN 1 5.288 15.603 VVIVKQESDEESRPQ-p O15164;S744-p VVIVKQESDEESRPQ 0.420315080186999 0.267378888373733 -0.136 -0.147666666666667 6.94896247636282 7.54319755953881 -0.136 -0.147666666666667 0.201884860627436 0.176067924205651 -1.4520763742761 -1.55533763865354 O15164 TRIM24 O15164.S744.p_TRIM24 O15164_S744s _1_1_744_744 O15164 O15164|O15164-2 Transcription intermediary factor 1-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.21045.21045.5 22.3 16.15 3.618 5 1 1 0 989.1039 4861.5 S744s TMT10 722 (R) IKQENSGPPENYDFPVVIVKQEsDEESRPQNANYPR (S) IKQENS(0.0)GPPENY(0.0)DFPVVIVKQES(0.99)DEES(0.0)RPQNANY(0.0)PR K:TMT10,s:Phosphorylated S TRIM24 118769 3 7 598.1 263.51 HUMAN 1 -6.949 -7.5432 VVKGIRLSENVIDRM-p F8WAR4;S29-p VVKGIRLSENVIDRM 0.308976508742224 0.596294763569082 0.146666666666667 -0.0503333333333333 9.53547205973138 3.03962506487809 0.146666666666667 -0.0503333333333333 0.111289141963744 0.49663519511041 1.90110633458041 -0.728346163335534 F8WAR4 NotFound F8WAR4.S29.p_NotFound F8WAR4_S29s _1_1_29_29 F8WAR4 F8WAR4|C9JRZ6|Q9NX63 MICOS complex subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.15643.15643.3 12.55 9.44 99 1 1 1 0 527.6169 1500.8696 S29s TMT10 25 (K) GIRLsENVIDR (M) GIRLS(1.0)ENVIDR s:Phosphorylated S CHCHD3 27848.9 2 1 2722.1 72.89 HUMAN 1 9.5355 -3.0396 VVKIRRLSLSPKKNK-p Q5FBB7;S459-p VVKIRRLSLSPKKNK 0.866815543662291 0.0134380087243859 0.0436666666666667 -0.778333333333333 1.20912862355497 26.0297866551846 0.0436666666666667 -0.778333333333333 0.756984762601552 0.00249471727556981 0.325543660743029 -5.30243172689849 Q5FBB7 SGOL1 Q5FBB7.S459.p_SGOL1 Q5FBB7_S459sS461s_2_2_459_461 Q5FBB7 Q5FBB7|Q5FBB7-6|Q5FBB7-2|Q5FBB7-3|Q5FBB7-4|Q5FBB7-5|Q9P0U3|Q9P0U3-2 Shugoshin 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13901.13901.3 7.34 7.34 99 2 2 2 0 464.2556 1230.8186 S459s S461s Hydrogen 458 (R) LsLsPKK (N) LS(1.0)LS(1.0)PKK K:TMT10-Lys-Only,s:Phosphorylated S SGO1 65044.6 2 22 1140.1 173.27 HUMAN 1 1.2091 -26.0298 VVKQEASSDEEASPF-p F5GX28;S667-p VVKQEASSDEEASPF 0.14685232684758 0.00840448513471 0.27 0.443333333333333 16.9159528793945 29.4785954484426 0.27 0.443333333333333 0.0203425181456223 0.00112756206200142 3.24609927239106 6.26533596606926 F5GX28 KDM4B F5GX28.S667.p_KDM4B F5GX28_S666sS667s_2_2_666_667 F5GX28 F5GX28|O94953|A0A0C4DFL8 Lysine-specific demethylase 4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.35664.35863.4 13.87 10.91 2.677 8 2 2 0 1298.4031 5030.6089 S666s S667s TMT10 656 (R) SPLSVVKQEAssDEEASPFSGEEDVSDPDALRPLLSLQWK (N) S(0.0)PLS(0.0)VVKQEAS(0.99)S(0.99)DEEAS(0.0)PFS(0.0)GEEDVS(0.0)DPDALRPLLS(0.0)LQWK K:TMT10,s:Phosphorylated S KDM4B 127963.8 3 8 1830.1 112.42 HUMAN 1 16.916 29.4786 VVKQEQLSPKKKENN-p Q9Y6Q9;S728-p VVKQEQLSPKKKENN 0.158414346785039 0.161520336645036 -0.374 0.141666666666667 16.0293896408679 10.4116574646758 -0.374 0.141666666666667 0.0249494534288081 0.0909566074724415 -3.07383543623987 2.05246027688663 Q9Y6Q9 NCOA3 Q9Y6Q9.S728.p_NCOA3 Q9Y6Q9_S728s _1_1_728_728 Q9Y6Q9 Q9Y6Q9|Q9Y6Q9-5|Q9Y6Q9-3|Q9Y6Q9-2|Q9Y6Q9-4 Nuclear receptor coactivator 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16705.16705.5 29.83 29.83 8.728 8 1 1 0 824.4352 4038.1835 S728s TMT10 701 (K) ITAEATGKDTSSITSCGDGNVVKQEQLsPK (K) IT(0.0)AEAT(0.0)GKDT(0.0)S(0.0)S(0.0)IT(0.0)S(0.0)CGDGNVVKQEQLS(0.99)PK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NCOA3 156203.6 12 9 503.1 290.6 HUMAN 1 -16.0294 10.4117 VVKQERLSPEVAPPA-p Q8TAD8;S35-p VVKQERLSPEVAPPA 0.178698212308073 0.240505705960235 0.267666666666667 -0.163 14.7681043821962 8.1541731550254 0.267666666666667 -0.163 0.0333571979200239 0.152961693954755 2.83507105132037 -1.66135810461389 Q8TAD8 SNIP1 Q8TAD8.S35.p_SNIP1 Q8TAD8_S35s _1_1_35_35 Q8TAD8 Q8TAD8 Smad nuclear-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.15470.15470.5 22.55 16.7 99 1 1 1 0 734.2067 3587.0334 S35s TMT10 16 (R) HRDGDVVLPAGVVVKQERLsPEVAPPAHR (R) HRDGDVVLPAGVVVKQERLS(1.0)PEVAPPAHR K:TMT10,s:Phosphorylated S SNIP1 45833.8 17 1 1038.1 185.39 HUMAN 1 14.7681 -8.1542 VVKRQAQSPAGVSSE-p Q13136;S150-p VVKRQAQSPAGVSSE 0.599304429327995 0.663527066558177 0.0973333333333333 -0.0516666666666667 4.1092735841071 2.44016934448603 0.0973333333333333 -0.0516666666666667 0.388215294786302 0.570142040293647 0.937960545198524 -0.604139470909064 Q13136 PPFIA1 Q13136.S150.p_PPFIA1 Q13136_S150s _1_1_150_150 Q13136 Q13136|Q13136-2|E9PJZ7 Liprin-alpha-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20282.20282.3 18.61 18.34 8.835 3 1 1 0 723.0526 2087.1749 S150s TMT10 147 (R) QAQsPAGVSSEVEVLK (A) QAQS(0.99)PAGVS(0.0)S(0.0)EVEVLK K:TMT10,s:Phosphorylated S PPFIA1 136347 4 20 248.1 410.18 HUMAN 1 4.1093 -2.4402 VVKSFSESQNKDEEF-p Q49MG5;S132-p VVKSFSESQNKDEEF 0.33211857233942 0.0169048692505771 -0.252 -0.366666666666667 8.94200957135962 24.4508262937314 -0.252 -0.366666666666667 0.127584831051828 0.00358853652236302 -1.79832431840126 -4.90007765491284 Q49MG5 MAP9 Q49MG5.S132.p_MAP9 Q49MG5_S132s _1_1_132_132 Q49MG5 Q49MG5|E7ETZ8|Q49MG5-2|A0A0C4DG83|A8MSM7 Microtubule-associated protein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.14458.14458.3 13.73 13.73 2.148 3 1 1 0 824.4029 2391.2283 S132s TMT10 128 (K) SFSEsQNKDEEFEK (D) S(0.0)FS(0.0)ES(0.99)QNKDEEFEK K:TMT10,s:Phosphorylated S MAP9 74403.8 1 4 1396.1 146.8 HUMAN 1 -8.942 -24.4508 VVKTEVCSPLRDQEY-p A0A087WWZ6;S29-p VVKTEVCSPLRDQEY 0.934963340701516 0.839811441190131 -0.0123333333333333 0.0213333333333334 0.57407661933062 1.06655019048875 -0.0123333333333333 0.0213333333333334 0.8761779875141 0.782248935732553 -0.163339902820699 0.290460659183905 A0A087WWZ6 PRDM11 A0A087WWZ6.S29.p_PRDM11 A0A087WWZ6_S29s _1_1_29_29 A0A087WWZ6 A0A087WWZ6 PR domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10575.10575.3 13.93 13.93 3.42 4 1 1 0 831.0362 2411.1281 S29s TMT10 25 (K) TEVCsPLRDQEYGQPCSR (R) T(0.0)EVCS(0.99)PLRDQEY(0.0)GQPCS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PRDM11 135856.5 2 1 5067.1 23.37 HUMAN 1 -0.5741 1.0666 VVKVANVSLLALYKG-p P62266;S129-p VVKVANVSLLALYKG 0.656414826447476 0.099059254396389 -0.086 -0.245666666666667 3.4307788442607 13.2694642289948 -0.086 -0.245666666666667 0.453860216094261 0.0471035432491215 -0.80662887344037 -2.55829964541594 P62266 RPS23 P62266.S129.p_RPS23 P62266_S129s _1_1_129_129 P62266 P62266 40S ribosomal protein S23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.29820.29820.3 12.77 10.55 7.239 2 1 1 0 577.0067 1649.0402 S129s TMT10 125 (K) VANVsLLALYK (G) VANVS(0.99)LLALY(0.0)K K:TMT10,s:Phosphorylated S RPS23 15978.4 2 2 4922.1 25.03 HUMAN 1 -3.4308 -13.2695 VVLCSCPSPSMVRTQ-p O15530;S25-p VVLCSCPSPSMVRTQ 0.520229952647624 0.51792582462211 0.0953333333333333 0.0963333333333333 5.24275110228745 3.83846018352205 0.0953333333333333 0.0963333333333333 0.299036974279056 0.413193976362139 1.14836322017338 0.885976741369732 O15530 PDPK1 O15530.S25.p_PDPK1 O15530_S25s _1_1_25_25 O15530 O15530|O15530-3|O15530-5|O15530-4 3-phosphoinositide-dependent protein kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28303.28303.3 22.97 21.08 1.106 9 1 1 0 1097.8605 3211.5999 S25s TMT10 4 (R) TTSQLYDAVPIQSSVVLCSCPsPSMVR (T) T(0.0)T(0.0)S(0.0)QLY(0.0)DAVPIQS(0.0)S(0.0)VVLCS(0.0)CPS(0.99)PS(0.0)MVR C:Carbamidomethylation,s:Phosphorylated S PDPK1 63664.2 4 1 2897.1 66.6 HUMAN 1 5.2428 3.8385 VVLKYRHSDGNLCVK-p P49458;S34-p VVLKYRHSDGNLCVK 0.14868246520739 0.0727841803049565 -0.303666666666667 -0.255333333333333 16.7078361121243 15.1206667193761 -0.303666666666667 -0.255333333333333 0.0213410797526144 0.0307562461534182 -3.20531001890947 -2.89920255545673 P49458 SRP9 P49458.S34.p_SRP9 P49458_S34s _1_1_34_34 P49458 P49458|P49458-2|E9PE20 Signal recognition particle 9 kDa protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.7586.7586.3 9.61 9.61 9.612 2 1 1 0 629.65 1806.9685 S34s TMT10 31 (K) YRHsDGNLCVK (V) Y(0.0)RHS(0.99)DGNLCVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SRP9 10225.7 3 1 5883.1 15.64 HUMAN 1 -16.7078 -15.1207 VVLNCEPSKERMLLS-p Q14690;S602-p VVLNCEPSKERMLLS 0.535600087803484 0.337281480400972 0.120333333333333 -0.101 5.01960819296649 6.25345032129514 0.120333333333333 -0.101 0.31480323070174 0.236949047844222 1.10765020882297 -1.32926186504183 Q14690 PDCD11 Q14690.S602.p_PDCD11 Q14690_S602s _1_1_602_602 Q14690 Q14690 Protein RRP5 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.14471.14471.3 10.31 10.31 99 1 1 1 0 656.6839 1888.0726 S602s TMT10 594 (K) VVVLNCEPsKER (M) VVVLNCEPS(1.0)KER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PDCD11 210066.3 1 3 1510.1 135.04 HUMAN 1 5.0196 -6.2535 VVLPRGKSLDQCVET-p Q8N5A5;S373-p VVLPRGKSLDQCVET 0.886027178849554 0.0734851151622655 -0.0283333333333333 -0.272333333333333 1.03048546587695 15.0534046477863 -0.0283333333333333 -0.272333333333333 0.788771941673167 0.0312362964029872 -0.28150800075024 -2.88658142591887 Q8N5A5 ZGPAT Q8N5A5.S373.p_ZGPAT Q8N5A5_S373s _1_1_373_373 Q8N5A5 Q8N5A5|Q8N5A5-2 Zinc finger CCCH-type with G patch domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18110.18110.3 14 11.65 10.19 2 1 1 0 620.3183 1778.9723 S373s TMT10 373 (K) sLDQCVETLQK (Q) S(0.99)LDQCVET(0.0)LQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZGPAT 57814.1 4 2 3615.1 46.88 HUMAN 1 -1.0305 -15.0534 VVLRGHESEVFICAW-p Q9BZK7;S170-p VVLRGHESEVFICAW 0.49665364009581 0.506428945172975 0.171333333333333 -0.098 5.597107056344 3.95912034146547 0.171333333333333 -0.098 0.275606397483261 0.401872201363282 1.2124433263057 -0.909154492483776 Q9BZK7 TBL1XR1 Q9BZK7.S170.p_TBL1XR1 Q9BZK7_S170s _1_1_170_170 Q9BZK7 O60907|O60907-2|Q9BQ87|Q9BZK7|A0A0D9SF63 F-box-like/WD repeat-containing protein TBL1XR1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.33728.33728.3 14.73 14.73 14.729 6 1 1 0 1091.163 3191.5265 S170s TMT10 167 (R) GHEsEVFICAWNPVSDLLASGSGDSTAR (I) GHES(0.99)EVFICAWNPVS(0.0)DLLAS(0.0)GS(0.0)GDS(0.0)T(0.0)AR C:Carbamidomethylation,s:Phosphorylated S TBL1XR1 56221.5 1 3 4131.1 37 HUMAN 1 5.5971 -3.9591 VVMNSQQTPVGTPKD-p O75781;T141-p VVMNSQQTPVGTPKD 0.253566244688488 0.685086262726147 0.178 0.053 11.3499937897885 2.24896788134179 0.178 0.053 0.0732825581045057 0.59580372190449 2.21754279216127 0.563189634135982 O75781 PALM O75781.T141.p_PALM O75781_T141tT145t_2_2_141_145 O75781 O75781|O75781-2 Paralemmin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13511.13511.3 20.15 20.15 4.539 4 2 2 0 897.7978 2531.447 T141t T145t TMT10 131 (R) KTEVVMNSQQtPVGtPK (D) KT(0.0)EVVMNS(0.0)QQT(0.99)PVGT(0.99)PK K:TMT10,t:Phosphorylated T PALM 42246.4 5 8 1689.1 120.82 HUMAN 1 11.35 2.249 VVNEGNYSG______-p P17032;S560-p VVNEGNYSG______ 0.728632435939496 0.0822101506802639 0.051 0.213 2.61077926636804 14.3801870764109 0.051 0.213 0.548178594923634 0.0364738235146518 0.640184371542883 2.76128148409571 P17032 ZNF37A P17032.S560.p_ZNF37A P17032_S560s _1_1_560_560 P17032 P17032 Zinc finger protein 37A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.18697.18697.2 8.64 8.64 2.818 2 1 1 0 843.3916 1605.807 S560s TMT10 549 (R) NPINVVNEGNYsG (-) NPINVVNEGNY(0.0)S(0.99)G s:Phosphorylated S ZNF37A 67128.1 1 1 6930.1 8.64 HUMAN 1 2.6108 14.3802 VVNEKKRTPNETTSV-p Q8TF01;T485-p VVNEKKRTPNETTSV 0.295125154480667 0.221464515961618 -0.171666666666667 0.166666666666667 9.99034868619808 8.62128704004852 -0.171666666666667 0.166666666666667 0.100222476826127 0.137363483536225 -1.98003373475445 1.74220794253992 Q8TF01 PNISR Q8TF01.T485.p_PNISR Q8TF01_T485t _1_1_485_485 Q8TF01 Q8TF01 Arginine/serine-rich protein PNISR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.9763.9763.5 13.51 13.51 2.724 4 1 1 0 545.723 2644.6168 T485t TMT10 483 (K) KRtPNETTSVLEPKK (E) KRT(0.99)PNET(0.0)T(0.0)S(0.0)VLEPKK K:TMT10,t:Phosphorylated T PNISR 92575.2 6 3 613.1 261.5 HUMAN 1 -9.9903 8.6213 VVNGAAASQPPSKRK-p O75533;S190-p VVNGAAASQPPSKRK 0.21187789108686 0.00750369286851835 0.637 -0.779666666666667 13.0119781677059 30.3814858468213 0.637 -0.779666666666667 0.0499806826136572 0.000915907078253956 2.51322554852586 -6.53849856271225 O75533 SF3B1 O75533.S190.p_SF3B1 O75533_S190s _1_1_190_190 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10069.10069.3 13.75 11.49 12.692 2 1 1 0 588.6545 1683.9794 S190s TMT10 183 (K) VVNGAAAsQPPSK (R) VVNGAAAS(0.99)QPPS(0.0)K K:TMT10,s:Phosphorylated S SF3B1 146569.5 3 6 53.1 735.77 HUMAN 1 13.012 -30.3815 VVNKQSVSPPIPHLR-p Q66K14;S741-p VVNKQSVSPPIPHLR 0.93306667659969 0.0644883420662438 0.0126666666666667 -0.411333333333333 0.592325604706257 15.849307085809 0.0126666666666667 -0.411333333333333 0.872504025851694 0.0260057445013068 0.168239984933058 -3.03718777791494 Q66K14 TBC1D9B Q66K14.S741.p_TBC1D9B Q66K14_S741s _1_1_741_741 Q66K14 Q66K14|Q66K14-2 TBC1 domain family member 9B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15917.15917.3 12.66 9.07 1.526 2 1 1 0 513.9454 1459.8583 S741s TMT10 738 (K) QSVsPPIPHLR (A) QS(0.0)VS(0.99)PPIPHLR s:Phosphorylated S TBC1D9B 141663.3 1 9 988.1 191.79 HUMAN 1 0.5923 -15.8493 VVNTDHGSPEQLQIP-p Q6IQ49;S278-p VVNTDHGSPEQLQIP 0.82619699417303 0.832867658086453 0.035 -0.021 1.60027995351795 1.11212633599426 0.035 -0.021 0.691786375769825 0.774082708728817 0.418341586908689 -0.301742196481294 Q6IQ49 SDE2 Q6IQ49.S278.p_SDE2 Q6IQ49_S278s _1_1_278_278 Q6IQ49 Q6IQ49|Q6IQ49-2|Q6IQ49-3 Replication stress response regulator SDE2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.16935.16935.3 24.16 19.95 4.713 4 1 1 0 853.4198 2478.2786 S278s TMT10 271 (R) VVNTDHGsPEQLQIPVTDSGR (H) VVNT(0.0)DHGS(0.99)PEQLQIPVT(0.0)DS(0.0)GR s:Phosphorylated S SDE2 50482.8 5 1 4988.1 24.16 HUMAN 1 1.6003 -1.1121 VVPGRPGSFSLMRTP-p Q9Y4F1-2;S761-p VVPGRPGSFSLMRTP 0.190631118670779 0.100788768328285 -0.268666666666667 -0.252 14.0774919961928 13.1651243961034 -0.268666666666667 -0.252 0.039106666737972 0.0482489159798686 -2.70715726936854 -2.53944995717431 Q9Y4F1 FARP1 Q9Y4F1.2.S761.p_FARP1 Q9Y4F1-2_S761s _1_1_761_761 Q9Y4F1-2 Q9Y4F1-2 Isoform 2 of FERM, ARHGEF and pleckstrin domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.32568.32568.3 18.09 10.14 1.119 2 1 1 0 855.7864 2485.3798 S761s TMT10 746 (K) DLIGIDNLVVPGRPGsFSLMR (T) DLIGIDNLVVPGRPGS(0.99)FS(0.0)LMR s:Phosphorylated S FARP1 122909.6 3 37 147.2 514.5 HUMAN 1 -14.0775 -13.1651 VVPIASLTPYQSKWT-p P27694;T191-p VVPIASLTPYQSKWT 0.931562158604219 0.0888522098155257 -0.016 -0.316 0.610780856413048 13.9134648033661 -0.016 -0.316 0.868804205259502 0.0406119197804286 -0.173179372570153 -2.67545126481313 P27694 RPA1 P27694.T191.p_RPA1 P27694_T191t _1_1_191_191 P27694 P27694 Replication protein A 70 kDa DNA-binding subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25199.25199.3 16.19 16.19 1.376 4 1 1 0 647.7004 1861.1199 T191t TMT10 184 (K) VVPIASLtPYQSK (W) VVPIAS(0.0)LT(0.99)PY(0.0)QS(0.0)K K:TMT10,t:Phosphorylated T RPA1 68764.6 1 4 1852.1 110.98 HUMAN 1 -0.6108 -13.9135 VVPPRAKSPTPESST-p Q9HAU0-6;S1021-p VVPPRAKSPTPESST 0.993866460520675 0.946416998636773 0.00133333333333333 -0.00799999999999999 0.0540937176587833 0.341538040611179 0.00133333333333334 -0.00799999999999997 0.987621710373429 0.924370752892007 0.0162441816841925 -0.0994285644867755 Q9HAU0 PLEKHA5 Q9HAU0.6.S1021.p_PLEKHA5 Q9HAU0-6_S1021s _1_1_1021_1021 Q9HAU0-6 Q9HAU0-6|Q9HAU0-4|Q9HAU0-2|Q9HAU0-8|Q9HAU0-5|A0JP02 Isoform 6 of Pleckstrin homology domain-containing family A member 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.18801.18801.4 14.96 14.74 1.124 8 1 1 0 701.6457 2723.591 S1021s TMT10 1019 (R) AKsPTPESSTIASYVTLRK (T) AKS(0.99)PT(0.0)PES(0.0)S(0.0)T(0.0)IAS(0.0)Y(0.0)VT(0.0)LRK K:TMT10,s:Phosphorylated S PLEKHA5 147692.6 9 12 374.1 338.83 HUMAN 1 0.0541 -0.3415 VVPPRTKSPTDDEVT-p Q5VTI5;S797-p VVPPRTKSPTDDEVT 0.611537267066762 0.12831445771401 0.0873333333333333 0.176333333333333 3.9583432336621 11.7575860294076 0.0873333333333333 0.176333333333333 0.401944117074614 0.0667177508293664 0.909158477021582 2.28829475640915 Q5VTI5 NotFound Q5VTI5.S797.p_NotFound Q5VTI5_S797s _1_1_797_797 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.9613.9827.4 15.58 15.58 1.333 5 1 1 0 599.8206 2316.2923 S797s TMT10 795 (R) TKsPTDDEVTPSAVVRR (N) T(0.0)KS(0.99)PT(0.0)DDEVT(0.0)PS(0.0)AVVRR K:TMT10,s:Phosphorylated S PLEKHA6 119745.7 25 23 52.1 743.36 HUMAN 1 3.9583 11.7576 VVQYPELSDHEFIEE-p Q9H1A4;S1058-p VVQYPELSDHEFIEE 0.591013822503522 0.892440402503888 0.0806666666666667 0.0143333333333334 4.20741920951994 0.694305583653162 0.0806666666666667 0.0143333333333334 0.379540459499702 0.852254771994536 0.95657608086029 0.195318045538141 Q9H1A4 ANAPC1 Q9H1A4.S1058.p_ANAPC1 Q9H1A4_S1058s _1_1_1058_1058 Q9H1A4 Q9H1A4 Anaphase-promoting complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.23661.23661.4 19.12 17.34 3.393 2 1 1 0 679.0945 2633.3863 S1058s TMT10 1049 (R) VNVVQYPELsDHEFIEEK (E) VNVVQY(0.0)PELS(0.99)DHEFIEEK K:TMT10,s:Phosphorylated S ANAPC1 218664.2 2 13 460.1 305.66 HUMAN 1 4.2074 0.6943 VVRDLSMSEEDQMMR-p Q7Z6Z7;S1370-p VVRDLSMSEEDQMMR 0.309869250687191 0.218706796343015 0.141 -0.170333333333333 9.51319666690429 8.68796161439634 0.141 -0.170333333333333 0.111861421346403 0.135270731501514 1.89724543592113 -1.75374133808437 Q7Z6Z7 HUWE1 Q7Z6Z7.S1370.p_HUWE1 Q7Z6Z7_S1370s _1_1_1370_1370 Q7Z6Z7 Q7Z6Z7|Q7Z6Z7-3|Q7Z6Z7-2 E3 ubiquitin-protein ligase HUWE1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18101.18101.2 9.54 9.54 2.581 2 1 1 0 890.8622 1700.7491 S1370s TMT10 1366 (R) DLSMsEEDQMMR (A) DLS(0.0)MS(0.99)EEDQMMR s:Phosphorylated S HUWE1 485818.9 1 9 11.1 1210.45 HUMAN 1 9.5132 -8.688 VVRIMSCSPDTQCSR-p Q9C0C9;S401-p VVRIMSCSPDTQCSR 0.628959461918082 0.150209881821515 0.0746666666666667 -0.213666666666667 3.74236184269439 10.8343036192388 0.0746666666666667 -0.213666666666667 0.422438815034684 0.0825219796881192 0.867549939529989 -2.12616339558132 Q9C0C9 UBE2O Q9C0C9.S401.p_UBE2O Q9C0C9_S401s _1_1_401_401 Q9C0C9 Q9C0C9 (E3-independent) E2 ubiquitin-conjugating enzyme HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9559.9559.2 11.53 11.53 1.93 4 1 1 0 875.8615 1670.7498 S401s TMT10 397 (R) IMSCsPDTQCSR (D) IMS(0.0)CS(0.99)PDT(0.0)QCS(0.0)R C:Carbamidomethylation,s:Phosphorylated S UBE2O 142717.3 8 5 308.1 373.27 HUMAN 1 3.7424 -10.8343 VVRKEAESCDCLQGF-p P07437;S126-p VVRKEAESCDCLQGF 0.618746671810809 0.00990355717121221 -0.105 0.433 3.87443108937332 28.1874276554372 -0.105 0.433 0.409785786806792 0.00151794918896228 -0.89304962382513 5.89044534087939 P07437 TUBB P07437.S126.p_TUBB P07437_S126s _1_1_126_126 P07437 P68371|A6NNZ2|P07437|P04350|Q5JP53|Q5ST81|Q3ZCM7|Q5SQY0|A0A075B736 Tubulin beta chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29415.29415.4 15.49 10.94 3.192 7 1 1 0 963.2105 3769.86 S126s TMT10 123 (K) EAEsCDCLQGFQLTHSLGGGTGSGMGTLLISK (I) EAES(0.99)CDCLQGFQLT(0.0)HS(0.0)LGGGT(0.0)GS(0.0)GMGT(0.0)LLIS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TUBB 50126.4 2 9 333.1 357.15 HUMAN 1 -3.8744 28.1874 VVRPPPRSPEPDTLP-p Q6PCT2;S408-p VVRPPPRSPEPDTLP 0.246490628895716 0.968323732084559 0.209333333333333 -0.00633333333333332 11.6382383091956 0.198568414954127 0.209333333333333 -0.0063333333333333 0.0685766347248632 0.955307436547362 2.26832758480026 -0.058682055852393 Q6PCT2 FBXL19 Q6PCT2.S408.p_FBXL19 Q6PCT2_S408s _1_1_408_408 Q6PCT2 Q6PCT2|H3BPZ0|Q6PCT2-3|Q6PCT2-2|H3BME1|H3BVB1 F-box/LRR-repeat protein 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12387.12387.5 17.5 17.5 5.348 3 1 1 0 644.3422 3137.717 S408s TMT10 400 (R) HVVRPPPRsPEPDTLPLAAGSDHPLPR (A) HVVRPPPRS(0.99)PEPDT(0.0)LPLAAGS(0.0)DHPLPR s:Phosphorylated S FBXL19 77474.5 2 1 5645.1 17.5 HUMAN 1 11.6382 -0.1986 VVRSPEGTPQKIRQL-p Q86WB0;T28-p VVRSPEGTPQKIRQL 0.350980238788805 0.00230169838731497 -0.145333333333333 -0.798333333333333 8.44946420221991 40.6637927432718 -0.145333333333333 -0.798333333333333 0.142907025488867 8.5826366267186e-05 -1.71305548897414 -10.4339966628011 Q86WB0 ZC3HC1 Q86WB0.T28.p_ZC3HC1 Q86WB0_S24sT28t_2_2_24_28 Q86WB0 Q86WB0|C9J0I9|Q86WB0-3|F8WAU5|F8WF13|F8WDK5|F8WBD7 Nuclear-interacting partner of ALK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16147.16147.3 11.06 11.06 99 2 2 2 0 748.7045 2084.1653 S24s T28t TMT10 17 (K) NWGAVVRsPEGtPQK (I) NWGAVVRS(1.0)PEGT(1.0)PQK K:TMT10,s:Phosphorylated S,t:Phosphorylated T ZC3HC1 56401.6 4 13 624.1 258.98 HUMAN 1 -8.4495 -40.6638 VVRVRPPTPRELDSQ-p Q86Y91-4;T27-p VVRVRPPTPRELDSQ 0.370256885733646 0.0117297467150433 0.189 -0.684333333333333 8.00209171872415 26.9927588312814 0.189 -0.684333333333333 0.158413003458445 0.00199859187204485 1.63552346726173 -5.55917027518037 Q86Y91 KIF18B Q86Y91.4.T27.p_KIF18B Q86Y91-4_T27t _1_1_27_27 Q86Y91-4 Q86Y91-4 Isoform 4 of Kinesin-like protein KIF18B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.5380.5602.3 8.07 4.23 99 1 1 1 0 377.8796 1051.6574 T27t TMT10 23 (R) VRPPtPR (E) VRPPT(1.0)PR t:Phosphorylated T KIF18B 96039.4 2 1 959.1 194.54 HUMAN 1 8.0021 -26.9928 VVSCVYPSSEKNNSN-p Q9NY27;S138-p VVSCVYPSSEKNNSN 0.660585362937783 0.892666436735134 -0.0643333333333333 -0.0193333333333333 3.36956860047798 0.691502752492771 -0.0643333333333333 -0.0193333333333333 0.460302294707457 0.852804974060166 -0.794526271545595 -0.194579737080563 Q9NY27 PPP4R2 Q9NY27.S138.p_PPP4R2 Q9NY27_S138s _1_1_138_138 Q9NY27 Q9NY27 Serine/threonine-protein phosphatase 4 regulatory subunit 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20696.20696.3 18.58 18.58 1.14 4 1 1 0 713.0219 2057.0812 S138s TMT10 128 (K) NVMVVSCVYPsSEK (N) NVMVVS(0.0)CVY(0.0)PS(0.99)S(0.0)EK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PPP4R2 47296.6 1 1 1705.1 120.12 HUMAN 1 -3.3696 -0.6915 VVSDADDSDSDAVSD-p Q96ST2;S420-p VVSDADDSDSDAVSD 0.331074010334231 0.0767204882627842 0.175833333333333 -0.208833333333333 8.96925437858338 14.796269858048 0.175833333333333 -0.208833333333333 0.126786952220894 0.0331415651158059 1.80304051963756 -2.83850657017789 Q96ST2 IWS1 Q96ST2.S420.p_IWS1 Q96ST2_S415sS420s_2_2_415_420 Q96ST2 Q96ST2|Q96ST2-3|Q96ST2-2 Protein IWS1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.14189.14189.2 10.13 10.13 1.218 4 2 2 0 1121.9803 2083.0079 S415s S420s TMT10 413 (R) VVsDADDsDSDAVSDK (S) VVS(0.99)DADDS(0.99)DS(0.0)DAVS(0.0)DK K:TMT10,s:Phosphorylated S IWS1 92010 3 17 230.1 422.87 HUMAN 2 8.9693 -14.7963 VVSETNDTKVLRH__-p P05783;T425-p VVSETNDTKVLRH__ 0.183050556766855 0.00433205919333218 0.246666666666667 0.941 14.4983294446375 34.7310266656231 0.246666666666667 0.941 0.0354949897858499 0.000336432027948736 2.78488123336568 7.99571806035223 P05783 KRT18 P05783.T425.p_KRT18 P05783_T425t _1_1_425_425 P05783 P05783 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.8613.8613.2 11.1 5.61 1.253 3 1 1 0 765.8945 1450.8153 T425t TMT10 418 (K) VVSETNDtK (V) VVS(0.0)ET(0.0)NDT(0.99)K K:TMT10,t:Phosphorylated T KRT18 48057 1 28 89.1 623.62 HUMAN 1 14.4983 34.731 VVSTPAPSPDASQLA-p Q8WWI1-3;S626-p VVSTPAPSPDASQLA 0.457695874229598 0.0734100397529774 -0.11 0.276666666666667 6.25636984055031 15.0631767248625 -0.11 0.276666666666667 0.236789813760677 0.031166090505522 -1.33010800376433 2.88841388332358 Q8WWI1 LMO7 Q8WWI1.3.S626.p_LMO7 Q8WWI1-3_S626s _1_1_626_626 Q8WWI1-3 Q8WWI1|Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18500.18500.3 24.73 24.73 1.979 9 1 1 0 1093.2375 3197.7166 S626s TMT10 614 (K) RTPNNVVSTPAPsPDASQLASSLSSQK (E) RT(0.0)PNNVVS(0.0)T(0.0)PAPS(0.99)PDAS(0.0)QLAS(0.0)S(0.0)LS(0.0)S(0.0)QK K:TMT10,s:Phosphorylated S LMO7 154694.3 10 16 61.1 704.74 HUMAN 1 -6.2564 15.0632 VVTVSSRSPRCPRNQ-p Q96RY5;S779-p VVTVSSRSPRCPRNQ 0.693490321562232 0.00261168545628943 0.0533333333333333 -0.760333333333333 2.98203030344101 39.3354846060751 0.0533333333333333 -0.760333333333334 0.50326527996194 0.00011653370098335 0.716760082063402 -9.83644940918805 Q96RY5 CRAMP1 Q96RY5.S779.p_CRAMP1 Q96RY5_S779s _1_1_779_779 Q96RY5 Q96RY5 Protein cramped-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.6367.6367.3 11.48 6.88 1.231 4 1 1 0 466.2554 1316.7848 S779s TMT10 772 (K) VVTVSSRsPR (C) VVT(0.0)VS(0.0)S(0.0)RS(0.99)PR s:Phosphorylated S CRAMP1 135914.1 1 8 647.1 254.68 HUMAN 1 2.982 -39.3355 VVVDFSATWCGPCKM-p P10599;T30-p VVVDFSATWCGPCKM 0.885538071886065 0.0215586044967789 0.0296666666666667 1.48 1.04265149707566 22.782550513272 0.0296666666666667 1.48 0.786565421469288 0.00526920322150662 0.284543151957158 4.49823340527145 P10599 TXN P10599.T30.p_TXN P10599_T30t _1_1_30_30 P10599 P10599|P10599-2 Thioredoxin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31292.31292.3 18.76 18.76 1.22 2 1 1 0 759.7111 2197.155 T30t TMT10 22 (K) LVVVDFSAtWCGPCK (M) LVVVDFS(0.0)AT(0.99)WCGPCK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T TXN 12022.6 1 2 4204.1 35.45 HUMAN 1 1.0427 22.7826 VVVGFPATPIIESRA-p O15270;T501-p VVVGFPATPIIESRA 0.498868510893363 0.13701485269334 0.122 -0.189 5.56388479137328 11.3738175983889 0.122 -0.189 0.277722790856136 0.0728816573670416 1.20646308441653 -2.22069275534148 O15270 SPTLC2 O15270.T501.p_SPTLC2 O15270_T501t _1_1_501_501 O15270 O15270 Serine palmitoyltransferase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.32102.32102.3 20 20 5.246 2 1 1 0 726.4035 2097.2269 T501t TMT10 490 (R) NIGVVVVGFPAtPIIESR (A) NIGVVVVGFPAT(0.99)PIIES(0.0)R t:Phosphorylated T SPTLC2 63607.8 1 1 4911.1 25.15 HUMAN 1 5.5639 -11.3738 VVVHVCESDQEKEEE-p E9PDJ2;S243-p VVVHVCESDQEKEEE 0.544873462268994 0.169111321833717 -0.0956666666666667 0.151333333333333 4.86946833376012 10.1514559827339 -0.0956666666666667 0.151333333333333 0.325876592592887 0.0965727062383896 -1.08008231618372 2.00721066549531 E9PDJ2 RCAN1 E9PDJ2.S243.p_RCAN1 E9PDJ2_S243s _1_1_243_243 E9PDJ2 E9PDJ2|P53805|E9PD55|P53805-2|P53805-3|P53805-4 Calcipressin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18254.18254.5 30.88 30.88 11.188 6 1 1 0 1025.897 5045.4599 S243s TMT10 218 (K) LGPGEKYELHAATDTTPSVVVHVCEsDQEKEEEEEMER (M) LGPGEKY(0.0)ELHAAT(0.0)DT(0.0)T(0.0)PS(0.0)VVVHVCES(0.99)DQEKEEEEEMER K:TMT10,C:Carbamidomethylation,s:Phosphorylated S RCAN1 32059 2 2 2472.1 81.93 HUMAN 1 -4.8695 10.1515 VVVSKEGSWEKPSDD-p Q9Y2W6;S270-p VVVSKEGSWEKPSDD 0.79189855843937 0.0136990633119768 -0.0443333333333333 0.388 1.95536976650126 25.8855299139061 -0.0443333333333333 0.388 0.637474802918949 0.00257897426604567 -0.498895513340389 5.26473106400972 Q9Y2W6 TDRKH Q9Y2W6.S270.p_TDRKH Q9Y2W6_S270s _1_1_270_270 Q9Y2W6 F6TB26|Q9Y2W6|Q5SZR4|Q9Y2W6-3 Tudor and KH domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15745.15745.3 9.09 9.09 1.411 3 1 1 0 803.0668 2327.2123 S270s TMT10 268 (K) EGsWEKPSDDSFQK (S) EGS(0.99)WEKPS(0.0)DDS(0.0)FQK K:TMT10,s:Phosphorylated S TDRKH 62444.3 2 2 2676.1 74.3 HUMAN 1 -1.9554 25.8855 VVVTTAPSPKQAPEQ-p Q6P4R8;S1291-p VVVTTAPSPKQAPEQ 0.372564086430927 0.864358031273441 -0.182666666666667 -0.0233333333333333 7.95446565313838 0.892615269406027 -0.182666666666667 -0.0233333333333333 0.160159769345785 0.814213826537698 -1.62726059971733 -0.246696901381784 Q6P4R8 NFRKB Q6P4R8.S1291.p_NFRKB Q6P4R8_S1291s _1_1_1291_1291 Q6P4R8 Q6P4R8-2|Q6P4R8-3 Nuclear factor related to kappa-B-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.17755.17755.3 19.32 17 1.295 5 1 1 0 632.3607 1815.0992 S1291s TMT10 1280 (K) AVSTVVVTTAPsPK (Q) AVS(0.0)T(0.0)VVVT(0.0)T(0.0)APS(0.99)PK K:TMT10,s:Phosphorylated S NFRKB 139455.1 4 9 791.1 224.91 HUMAN 1 -7.9545 -0.8926 VVYSKAASVPKVETV-p P55010;S410-p VVYSKAASVPKVETV 0.0611233751023293 0.0330491737060948 -0.571 -0.352333333333333 26.4915929800418 19.967674626426 -0.571 -0.352333333333333 0.00224305902508179 0.0100747096174266 -5.43174433173947 -3.86840406938791 P55010 EIF5 P55010.S410.p_EIF5 P55010_S410s _1_1_410_410 P55010 P55010 Eukaryotic translation initiation factor 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14002.14002.3 10.76 10.76 10.763 2 1 1 0 632.711 1816.1511 S410s TMT10 408 (K) AAsVPKVETVK (S) AAS(0.99)VPKVET(0.0)VK K:TMT10,s:Phosphorylated S EIF5 49678.3 1 8 980.1 192.67 HUMAN 1 -26.4916 -19.9677 VWEARKLSRDEDDNL-p Q8WU20;S365-p VWEARKLSRDEDDNL 0.0386603595331013 0.178742216526909 -0.723 0.153666666666667 32.1066113238613 9.83641171345243 -0.723 0.153666666666667 0.000615657065016898 0.103838601080224 -7.09956688132462 1.95252803352274 Q8WU20 FRS2 Q8WU20.S365.p_FRS2 Q8WU20_S365s _1_1_365_365 Q8WU20 Q8WU20 Fibroblast growth factor receptor substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.9672.9672.3 9.97 5.29 99 1 1 1 0 752.0729 2174.2384 S365s TMT10 363 (R) KLsRDEDDNLGPK (T) KLS(1.0)RDEDDNLGPK K:TMT10,s:Phosphorylated S FRS2 57427.4 4 11 301.1 376.53 HUMAN 1 -32.1066 9.8364 VWQVTIGTR______-p P63244;T316-p VWQVTIGTR______ 0.331074010334231 0.0166381899389485 -0.155 -0.353333333333333 8.96793855259734 24.5642424889319 -0.155 -0.353333333333333 0.126825371968081 0.0034960348329831 -1.80281274205707 -4.92824091433791 P63244 GNB2L1 P63244.T316.p_GNB2L1 P63244_T316t _1_1_316_316 P63244 P63244|J3KPE3|D6RAC2|D6RHH4|D6RF23|D6RHJ5 Receptor of activated protein C kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21338.21338.2 11.17 11.17 2.563 2 1 1 0 684.8665 1288.7575 T316t TMT10 309 (R) VWQVTIGtR (-) VWQVT(0.0)IGT(0.99)R t:Phosphorylated T RACK1 35532.5 2 6 2731.1 72.44 HUMAN 1 -8.9679 -24.5642 VYAGAGGSGSRISVS-p P05783;S42-p VYAGAGGSGSRISVS 0.186064438940775 0.961050637830868 0.236666666666667 -0.00633333333333332 14.3553148122591 0.248267300338203 0.236666666666667 -0.00633333333333332 0.0366833102405706 0.944437602305722 2.75839154389054 -0.0729814103123257 P05783 KRT18 P05783.S42.p_KRT18 P05783_S42s _1_1_42_42 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16954.16954.4 29.04 29.04 1.125 10 1 1 0 791.6416 3083.5708 S42s TMT10 15 (R) SLGSVQAPSYGARPVSSAASVYAGAGGsGSR (I) S(0.0)LGS(0.0)VQAPS(0.0)Y(0.0)GARPVS(0.0)S(0.0)AAS(0.0)VY(0.0)AGAGGS(0.99)GS(0.0)R s:Phosphorylated S KRT18 48057 23 10 89.1 623.62 HUMAN 1 14.3553 -0.2483 VYATTVGTPYKGGNL-p Q13439-5;T2169-p VYATTVGTPYKGGNL 0.39120743112417 0.0810845356188457 -0.176333333333333 -0.373666666666667 7.51484575141392 14.4675179017283 -0.176333333333333 -0.373666666666667 0.177221098772271 0.0357477086602991 -1.55086675194203 -2.77743341963522 Q13439 GOLGA4 Q13439.5.T2169.p_GOLGA4 Q13439-5_T2169t _1_1_2169_2169 Q13439-5 Q13439-5|Q13439-4|Q13439-3 Isoform 5 of Golgin subfamily A member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15748.15748.3 12.63 12.63 2.441 5 1 1 0 617.9947 1771.9995 T2169t TMT10 2161 (K) NVYATTVGtPYK (G) NVY(0.0)AT(0.0)T(0.0)VGT(0.99)PY(0.0)K K:TMT10,t:Phosphorylated T GOLGA4 263236.4 1 10 575.1 268.28 HUMAN 1 -7.5148 -14.4675 VYDRPGASPKRNHDG-p Q12769;S1157-p VYDRPGASPKRNHDG 0.259256728457964 0.0214323634668961 -0.359 0.351666666666667 11.1352363396744 22.8191626429971 -0.359 0.351666666666667 0.0769974541801885 0.00522496921174735 -2.17981870207921 4.50681094972481 Q12769 NUP160 Q12769.S1157.p_NUP160 Q12769_S1157s _1_1_1157_1157 Q12769 Q12769 Nuclear pore complex protein Nup160 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.27094.27094.5 21.28 18.17 3.79 4 1 1 0 682.3723 3327.8618 S1157s TMT10 1134 (R) LIRPEYAWIVQPVSGAVYDRPGAsPK (R) LIRPEY(0.0)AWIVQPVS(0.0)GAVY(0.0)DRPGAS(0.99)PK K:TMT10,s:Phosphorylated S NUP160 164457.6 9 2 2575.1 78.09 HUMAN 1 -11.1352 22.8192 VYERGRHTPSIIFRR-p Q9BZD6;T161-p VYERGRHTPSIIFRR 0.844396662154091 0.0256234842953931 -0.0526666666666667 -0.321666666666667 1.42204700728607 21.6484731149506 -0.0526666666666667 -0.321666666666667 0.720767671862276 0.00684152138032048 -0.376632901032367 -4.237614563411 Q9BZD6 PRRG4 Q9BZD6.T161.p_PRRG4 Q9BZD6_T161t _1_1_161_161 Q9BZD6 Q9BZD6 Transmembrane gamma-carboxyglutamic acid protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.9277.9277.3 11.8 11.8 11.798 2 1 1 0 498.2712 1412.8324 T161t TMT10 158 (R) GRHtPSIIFR (R) GRHT(0.99)PS(0.0)IIFR t:Phosphorylated T PRRG4 25745 1 1 3095.1 60.78 HUMAN 1 -1.422 -21.6485 VYGEKRVSISEGDDK-p P22087;S124-p VYGEKRVSISEGDDK 0.132299064479126 0.0318082035389879 -0.259 -0.290333333333333 18.1269597506059 20.2188479415279 -0.259 -0.290333333333333 0.0153923179212565 0.0095085699524319 -3.48800518166318 -3.92235401326629 P22087 FBL P22087.S124.p_FBL P22087_S124s _1_1_124_124 P22087 P22087 rRNA 2'-O-methyltransferase fibrillarin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12363.12363.4 13.4 13.4 2.718 3 1 1 0 552.0386 2125.1654 S124s TMT10 122 (K) RVsISEGDDKIEYR (A) RVS(0.99)IS(0.0)EGDDKIEY(0.0)R K:TMT10,s:Phosphorylated S FBL 33897.7 7 2 4750.1 27.05 HUMAN 1 -18.127 -20.2188 VYIEKPRSAAGLSSL-p Q5T5P2;S526-p VYIEKPRSAAGLSSL 0.323049007555811 0.0377647683175804 0.202333333333333 0.399 9.1870895859658 19.1127596532155 0.202333333333333 0.399 0.120584376296144 0.01226659522738 1.84075392732605 3.6878159725836 Q5T5P2 KIAA1217 Q5T5P2.S526.p_KIAA1217 Q5T5P2_S526s _1_1_526_526 Q5T5P2 Q5T5P2|Q5T5P2-3|Q5T5P2-10|Q5T5P2-7|Q5T5P2-2|Q5T5P2-9 Sickle tail protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.34069.34069.3 11.71 11.71 1.138 3 1 1 0 698.6982 2014.1092 S526s Hydrogen 526 (R) sAAGLSSLVDLGPPLMEK (Q) S(0.99)AAGLS(0.0)S(0.0)LVDLGPPLMEK K:TMT10-Lys-Only,s:Phosphorylated S KIAA1217 214739.6 1 7 303.1 376.04 HUMAN 1 9.1871 19.1128 VYKEVIKSPTASRIS-p O94885;S442-p VYKEVIKSPTASRIS 0.876836931871133 0.184388752201514 -0.0253333333333333 0.151666666666667 1.12109196243598 9.65367935824577 -0.0253333333333333 0.151666666666667 0.772486331623486 0.108300899618381 -0.303983206255719 1.92085377264446 O94885 SASH1 O94885.S442.p_SASH1 O94885_S442s _1_1_442_442 O94885 O94885 SAM and SH3 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.8073.8073.2 13.74 8.18 1.652 3 1 1 0 813.4543 1545.9365 S442s TMT10 438 (K) EVIKsPTASR (I) EVIKS(0.99)PT(0.0)AS(0.0)R K:TMT10,s:Phosphorylated S SASH1 137734.8 4 8 295.1 379.69 HUMAN 1 -1.1211 9.6537 VYKLPPPTPPGPPGD-p Q96GY3;T167-p VYKLPPPTPPGPPGD 0.553876099006549 0.228176798914568 0.0806666666666667 -0.122 4.73649554593149 8.4541304818939 0.0806666666666667 -0.122 0.33600864045508 0.142753561408893 1.05554053630746 -1.71328768166 Q96GY3 LIN37 Q96GY3.T167.p_LIN37 Q96GY3_T167t _1_1_167_167 Q96GY3 Q96GY3 Protein lin-37 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.14927.14927.3 13.36 13.36 99 1 1 1 0 613.3027 1757.9206 T167t TMT10 163 (K) LPPPtPPGPPGDACR (S) LPPPT(1.0)PPGPPGDACR C:Carbamidomethylation,t:Phosphorylated T LIN37 28667.9 3 3 1804.1 113.98 HUMAN 1 4.7365 -8.4541 VYKRESGSPYSVLVD-p Q9Y2D9;S57-p VYKRESGSPYSVLVD 0.659408715826103 0.01156663780652 -0.0713333333333333 0.759333333333333 3.39334822978417 27.0996631777629 -0.0713333333333334 0.759333333333333 0.457788814498569 0.0019499958281332 -0.799233535111138 5.58822780056639 Q9Y2D9 ZNF652 Q9Y2D9.S57.p_ZNF652 Q9Y2D9_S57s _1_1_57_57 Q9Y2D9 Q9Y2D9|D6RF85 Zinc finger protein 652 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21479.21479.2 14.64 14.64 1.371 5 1 1 0 960.4905 1840.0104 S57s TMT10 54 (R) ESGsPYSVLVDTK (M) ES(0.0)GS(0.99)PY(0.0)S(0.0)VLVDT(0.0)K K:TMT10,s:Phosphorylated S ZNF652 71055.1 4 2 1862.1 110.65 HUMAN 1 -3.3933 27.0997 VYKSPVVSGDTSPRH-p P10636;S717-p VYKSPVVSGDTSPRH 0.240454252921953 0.0043036796371177 0.669 -0.992666666666667 11.8331728450998 34.78934267546 0.669 -0.992666666666667 0.0655666078311235 0.000331944695096831 2.30277861945557 -8.01698414313662 P10636 MAPT P10636.S717.p_MAPT P10636_S717s _1_1_717_717 P10636 P10636-9|A0A0G2JMX7|A0A0G2JS76|A0A0G2JPD5|A0A0G2JQJ7|P10636-8|P10636-7|P10636-5|P10636-6|P10636-4|P10636-2|I3L170|P10636-3 Microtubule-associated protein tau HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12394.12394.5 22.88 22.88 1.197 6 1 1 0 637.1439 3101.7198 S717s TMT10 701 (K) AKTDHGAEIVYKSPVVsGDTSPR (H) AKT(0.0)DHGAEIVY(0.0)KS(0.0)PVVS(0.99)GDT(0.0)S(0.0)PR K:TMT10,s:Phosphorylated S MAPT 79154.4 2 22 119.1 551.6 HUMAN 1 11.8332 -34.7893 VYLDEAPSSPDVKLA-p Q9Y3S1;S1817-p VYLDEAPSSPDVKLA 0.555476059489065 0.531389300291025 -0.078 0.0753333333333334 4.7135546633024 3.69123872773049 -0.078 0.0753333333333334 0.337788246228911 0.427440950805932 -1.05129400862427 0.857492279705301 Q9Y3S1 WNK2 Q9Y3S1.S1817.p_WNK2 Q9Y3S1_S1817sS1818s_2_2_1817_1818 Q9Y3S1 Q9Y3S1|Q9Y3S1-4|Q9Y3S1-2|F8W9F9|E9PCD1 Serine/threonine-protein kinase WNK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24645.24645.3 12.97 12.97 4.23 5 2 2 0 890.0812 2508.291 S1817s S1818s TMT10 1804 (R) YSAPPDVYLDEAPssPDVK (L) Y(0.0)S(0.0)APPDVY(0.0)LDEAPS(0.99)S(0.99)PDVK K:TMT10,s:Phosphorylated S WNK2 244440.3 1 5 3090.1 60.95 HUMAN 1 -4.7136 3.6912 VYQELPNSDPADPNS-p Q7Z7L1;S180-p VYQELPNSDPADPNS 0.380681856269027 0.892528691930729 0.139 -0.015 7.74798975579004 0.693308213610911 0.139 -0.015 0.167958127580746 0.852450517283709 1.59141076996248 -0.195055363345571 Q7Z7L1 SLFN11 Q7Z7L1.S180.p_SLFN11 Q7Z7L1_S180s _1_1_180_180 Q7Z7L1 Q7Z7L1 Schlafen family member 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.30160.30160.3 16.97 16.97 2.343 3 1 1 0 1090.1967 3188.6152 S180s TMT10 172 (K) GVYQELPNsDPADPNSDPADLIFQK (D) GVY(0.0)QELPNS(0.99)DPADPNS(0.0)DPADLIFQK K:TMT10,s:Phosphorylated S SLFN11 104374.1 2 1 5708.1 16.97 HUMAN 1 7.748 -0.6933 VYQEPIMSQGAALSG-p O60502;S439-p VYQEPIMSQGAALSG 0.879160753287208 0.0447171083705694 0.033 0.343666666666667 1.10017177789772 18.0618955534852 0.033 0.343666666666667 0.776216414083222 0.0156246552864997 0.298820098132816 3.47194786617772 O60502 MGEA5 O60502.S439.p_MGEA5 O60502_S439s _1_1_439_439 O60502 O60502|O60502-4|O60502-2|O60502-3 Protein O-GlcNAcase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.33420.33420.5 26.35 25.36 2.369 13 1 1 0 1154.6086 5689.0388 S439s TMT10 409 (K) ASVVDGTPLVAAPSLNATTVVTTVYQEPIMsQGAALSGEPTTLTKEEEK (K) AS(0.0)VVDGT(0.0)PLVAAPS(0.0)LNAT(0.0)T(0.0)VVT(0.0)T(0.0)VY(0.0)QEPIMS(0.99)QGAALS(0.0)GEPT(0.0)T(0.0)LT(0.0)KEEEK K:TMT10,s:Phosphorylated S MGEA5 103997.3 1 2 1909.1 107.89 HUMAN 1 1.1002 18.0619 VYQPHLISVEEMKKQ-p Q04656-3;S302-p VYQPHLISVEEMKKQ 0.840299429548807 0.0513969838193508 0.05 0.879 1.45993389869153 17.2055447324217 0.05 0.879 0.714507201070119 0.019030295269914 0.385576188260786 3.3006756695281 Q04656 ATP7A Q04656.3.S302.p_ATP7A Q04656-3_T293tS302s_2_2_293_302 Q04656-3 Q04656-3|Q04656-2|Q04656-5 Isoform 2 of Copper-transporting ATPase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.37739.37739.4 8.59 8.59 1.765 4 2 2 0 852.1724 3229.7543 T293t S302s M306m Hydrogen 285 (K) VSLDNQEAtIVYQPHLIsVEEmKK (Q) VS(0.0)LDNQEAT(0.99)IVY(0.0)QPHLIS(0.99)VEEM(1.0)KK K:TMT10-Lys-Only,t:Phosphorylated T,s:Phosphorylated S,m:Oxidized methionine ATP7A 173615 4 8 1241.1 162.93 HUMAN 1 1.4599 17.2055 VYRETDPSPEERDKK-p Q9H4G0;S870-p VYRETDPSPEERDKK 0.483108623711473 0.155648454815086 0.107 0.146 5.81900712266783 10.6229709309877 0.107 0.146 0.261878164159843 0.0866369005431674 1.25225328453646 2.08927589179288 Q9H4G0 EPB41L1 Q9H4G0.S870.p_EPB41L1 Q9H4G0_S870s _1_1_870_870 Q9H4G0 Q9H4G0|A0A0C4DH22|Q9H4G0-2|Q9H4G0-3|Q9H4G0-4 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8099.8099.3 15.17 10.7 2 3 1 1 0 652.981 1876.9602 S870s TMT10 861 (K) AVVYRETDPsPEER (D) AVVY(0.0)RET(0.0)DPS(0.99)PEER s:Phosphorylated S EPB41L1 99071.6 8 24 174.1 483.37 HUMAN 1 5.819 10.623 VYRQLHNSLDPSELP-p Q86V48;S1042-p VYRQLHNSLDPSELP 0.652424715540653 0.00661421024369985 0.0706666666666667 -0.523333333333333 3.47802784042167 31.3212290781564 0.0706666666666667 -0.523333333333334 0.4489492144181 0.000737695428570294 0.815939669288413 -6.83293877705812 Q86V48 LUZP1 Q86V48.S1042.p_LUZP1 Q86V48_S1042s _1_1_1042_1042 Q86V48 Q86V48 Leucine zipper protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.15700.15700.3 16.9 16.9 6.613 2 1 1 0 691.6971 1993.1119 S1042s TMT10 1038 (R) QLHNsLDPSELPGK (Q) QLHNS(0.99)LDPS(0.0)ELPGK K:TMT10,s:Phosphorylated S LUZP1 120843.3 1 19 507.1 289.34 HUMAN 1 3.478 -31.3212 VYSGQQPSVGTEIFV-p O60506;S159-p VYSGQQPSVGTEIFV 0.492907411646546 0.592379702697166 0.117 0.0993333333333333 5.65939816101418 3.07692225975136 0.117 0.0993333333333333 0.271681573513238 0.492388355818823 1.22364177209386 0.735888420454994 O60506 SYNCRIP O60506.S159.p_SYNCRIP O60506_S159s _1_1_159_159 O60506 O60506|O60506-2|O60506-3|O60506-4|B7Z645 Heterogeneous nuclear ribonucleoprotein Q HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.26695.26695.3 17.96 17.96 1.777 6 1 1 0 1157.5958 3390.8098 S159s TMT10 144 (K) YGGPPPDSVYSGQQPsVGTEIFVGKIPR (D) Y(0.0)GGPPPDS(0.0)VY(0.0)S(0.0)GQQPS(0.99)VGT(0.0)EIFVGKIPR K:TMT10,s:Phosphorylated S SYNCRIP 69829.6 1 10 1376.1 148.68 HUMAN 1 5.6594 3.0769 VYVSRRRSRSPLDKD-p Q96T37;S257-p VYVSRRRSRSPLDKD 0.845365629313045 0.136228682802852 0.039 0.164666666666667 1.40933502708091 11.407300629328 0.039 0.164666666666667 0.722880479460015 0.0723219183032428 0.373622557470658 2.22657816896329 Q96T37 RBM15 Q96T37.S257.p_RBM15 Q96T37_S257sS259s_2_2_257_259 Q96T37 Q96T37|Q96T37-3|Q96T37-2|A0A087WWP4|Q96T37-4 Putative RNA-binding protein 15 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13367.13367.3 9.49 9.49 3.629 7 2 2 0 977.1345 2769.4481 S257s S259s Hydrogen 257 (R) sRsPLDKDTYPPSASVVGASVGGHR (H) S(0.99)RS(0.99)PLDKDT(0.0)Y(0.0)PPS(0.0)AS(0.0)VVGAS(0.0)VGGHR K:TMT10-Lys-Only,s:Phosphorylated S RBM15 107414.9 15 35 55.1 724.11 HUMAN 1 1.4093 11.4073 WAARGFGSLPCILNA-p Q8WWL2;S371-p WAARGFGSLPCILNA 0.843942307663143 0.183463859523162 -0.029 -0.146666666666667 1.42717681481517 9.68613362977164 -0.029 -0.146666666666667 0.719916816787478 0.107494597287719 -0.37784631768973 -1.92647732121208 Q8WWL2 SPIRE2 Q8WWL2.S371.p_SPIRE2 Q8WWL2_S371s _1_1_371_371 Q8WWL2 Q8WWL2|Q8WWL2-2|Q8WWL2-3|Q8WWL2-4 Protein spire homolog 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.28469.28469.3 15.76 15.76 6.179 2 1 1 0 769.0421 2225.1459 S371s TMT10 368 (R) GFGsLPCILNACSGDAK (S) GFGS(0.99)LPCILNACS(0.0)GDAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SPIRE2 80924.6 3 1 1538.1 133.27 HUMAN 1 -1.4272 -9.6861 WADAADVSGPDDEPA-p Q9P2F8;S1304-p WADAADVSGPDDEPA 0.92444376518297 0.0629015317055474 0.014 -0.25 0.671892005488012 15.9944148200852 0.014 -0.25 0.856664557699099 0.0251511888396063 0.1894220292081 -3.06495319781684 Q9P2F8 SIPA1L2 Q9P2F8.S1304.p_SIPA1L2 Q9P2F8_S1304s _1_1_1304_1304 Q9P2F8 Q9P2F8|Q9P2F8-2 Signal-induced proliferation-associated 1-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17879.17879.3 23.63 23.63 99 1 1 1 0 837.3897 2430.1825 S1304s TMT10 1294 (R) AEQWADAADVsGPDDEPAK (L) AEQWADAADVS(1.0)GPDDEPAK K:TMT10,s:Phosphorylated S SIPA1L2 192488.1 1 9 322.1 363.46 HUMAN 1 0.6719 -15.9944 WAPLENRSPGPGSGG-p Q6P4I2;S216-p WAPLENRSPGPGSGG 0.941417637290191 0.488967444309648 -0.0113333333333333 -0.0713333333333333 0.515752223776837 4.15315767517279 -0.0113333333333333 -0.0713333333333333 0.888024151952869 0.384312254077657 -0.147571015973728 -0.946130137480166 Q6P4I2 WDR73 Q6P4I2.S216.p_WDR73 Q6P4I2_S216s _1_1_216_216 Q6P4I2 Q6P4I2 WD repeat-containing protein 73 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13627.13627.3 14.61 10.66 3.154 2 1 1 0 692.6682 1996.0198 S216s TMT10 209 (K) WAPLENRsPGPGSGGER (W) WAPLENRS(0.99)PGPGS(0.0)GGER s:Phosphorylated S WDR73 42254.8 1 1 6021.1 14.61 HUMAN 1 -0.5158 -4.1532 WARTPRLSVMEEDQA-p A0A087WXK5;S989-p WARTPRLSVMEEDQA 0.893308309460576 0.192631234353937 0.0253333333333333 0.137 0.95843751260131 9.40460412718949 0.0253333333333334 0.137 0.801966539820361 0.114693706350734 0.263420174117768 1.87771895799073 A0A087WXK5 NotFound A0A087WXK5.S989.p_NotFound A0A087WXK5_S989s _1_1_989_989 A0A087WXK5 A0A087WXK5|Q9BZC7-3|J3QSS3|Q9BZC7-2 ATP-binding cassette sub-family A member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17029.17029.3 16.07 16.07 2.54 3 1 1 0 807.0223 2339.0991 S989s TMT10 985 (R) TPRLsVMEEDQACAMESR (R) T(0.0)PRLS(0.99)VMEEDQACAMES(0.0)R C:Carbamidomethylation,s:Phosphorylated S ABCA2 275398.6 2 4 1069.1 180.75 HUMAN 1 0.9584 9.4046 WATHGEPSPVNSHPQ-p Q06210;S103-p WATHGEPSPVNSHPQ 0.734788762117455 0.162017860050926 0.0773333333333333 -0.213333333333333 2.53466784632643 10.3942320588359 0.0773333333333334 -0.213333333333333 0.557870267102549 0.0913222901645448 0.624202757404727 -2.04942721033695 Q06210 GFPT1 Q06210.S103.p_GFPT1 Q06210_S103s_1_1_103_103 Q06210 Q06210|Q06210-2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6681.6681.3 11.47 11.47 1.199 3 1 1 0 703.9999 2029.0201 S103s N106n TMT10 96 (R) WATHGEPsPVnSHPQR (S) WAT(0.0)HGEPS(0.99)PVN(1.0)S(0.0)HPQR s:Phosphorylated S,n:Deamidated GFPT1 79603.8 1 1 1792.1 114.51 HUMAN 1 2.5347 -10.3942 WCRGRLDSGQLGLYP-p Q9BY11;S430-p WCRGRLDSGQLGLYP 0.0310171791072613 0.0352412799548924 -1.02366666666667 -0.605 35.2369963256673 19.5622824592624 -1.02366666666667 -0.605 0.000299433486721231 0.0110604234437926 -8.1979054530566 -3.78219411298497 Q9BY11 PACSIN1 Q9BY11.S430.p_PACSIN1 Q9BY11_S430s _1_1_430_430 Q9BY11 Q9BY11|F6U236 Protein kinase C and casein kinase substrate in neurons protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.29646.29646.3 19.74 19.74 10.018 3 1 1 0 782.3957 2265.2077 S430s TMT10 426 (R) GRLDsGQLGLYPANYVEAI (-) GRLDS(0.99)GQLGLY(0.0)PANY(0.0)VEAI s:Phosphorylated S PACSIN1 51307 1 6 968.1 193.63 HUMAN 1 -35.237 -19.5623 WDEDAWASKDTEAMK-p P18206-2;S260-p WDEDAWASKDTEAMK 0.529276501737613 0.0856191255557456 -0.085 0.221666666666667 5.11227505784583 14.1261510641603 -0.085 0.221666666666667 0.30815732408092 0.038670954665467 -1.12459384990426 2.7144633928958 P18206 VCL P18206.2.S260.p_VCL P18206-2_S260s _1_1_260_260 P18206-2 P18206|P18206-2|P18206-3 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.31706.31706.3 12.53 12.53 3.451 3 1 1 0 763.0546 2207.1749 S260s TMT10 247 (R) VLQLTSWDEDAWAsK (D) VLQLT(0.0)S(0.0)WDEDAWAS(0.99)K K:TMT10,s:Phosphorylated S VCL 117290.9 2 1 319.1 365.38 HUMAN 1 -5.1123 14.1262 WDGSSDLSPSDSGSS-p Q14CW9-2;S288-p WDGSSDLSPSDSGSS 0.732651492896551 0.211231947206593 -0.047 0.132666666666667 2.55870330612339 8.88333899405664 -0.047 0.132666666666667 0.554791334942748 0.129320120494244 -0.629260675205013 1.78753449004302 Q14CW9 ATXN7L3 Q14CW9.2.S288.p_ATXN7L3 Q14CW9-2_S288s _1_1_288_288 Q14CW9-2 Q14CW9-2 Isoform 2 of Ataxin-7-like protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19506.19506.2 21.1 21.1 2.589 7 1 1 0 1196.0623 2311.1454 S288s TMT10 279 (R) LQWDGSSDLsPSDSGSSK (T) LQWDGS(0.0)S(0.0)DLS(0.99)PS(0.0)DS(0.0)GS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S ATXN7L3 40169 4 3 1482.1 138.38 HUMAN 1 -2.5587 8.8833 WDHGDTQSIQSSRTG-p Q9P206-3;S104-p WDHGDTQSIQSSRTG 0.401454832845887 0.404441097732141 0.174 -0.119 7.31593351703226 5.23143349033571 0.174 -0.119 0.185526797627323 0.299817273873346 1.51621021363472 -1.14606453610805 Q9P206 KIAA1522 Q9P206.3.S104.p_KIAA1522 Q9P206-3_S104sS107s_2_2_104_107 Q9P206-3 Q9P206-2|Q9P206-3 Isoform 3 of Uncharacterized protein KIAA1522 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8265.8265.3 9.94 9.94 1.114 4 2 2 0 673.9428 1859.8834 S104s S107s TMT10 95 (K) GGWDHGDTQsIQsSR (T) GGWDHGDT(0.0)QS(0.99)IQS(0.99)S(0.0)R s:Phosphorylated S KIAA1522 108782.6 1 41 62.1 704.36 HUMAN 1 7.3159 -5.2314 WDKDDFESEEEDVKS-p Q7Z6E9;S1328-p WDKDDFESEEEDVKS 0.303423649713577 0.359158534441274 -0.257 0.100333333333333 9.70534657871643 5.90072584275561 -0.257 0.100333333333333 0.107020097457771 0.256996622463826 -1.93056147680753 1.26656183083333 Q7Z6E9 RBBP6 Q7Z6E9.S1328.p_RBBP6 Q7Z6E9_S1328s _1_1_1328_1328 Q7Z6E9 Q7Z6E9|Q7Z6E9-2|Q7Z6E9-4 E3 ubiquitin-protein ligase RBBP6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.23116.23116.5 21.96 21.96 6.118 6 1 1 0 916.0885 4496.4421 S1328s TMT10 1321 (K) WDKDDFEsEEEDVKSTQPISSVGKPASVIK (N) WDKDDFES(0.99)EEEDVKS(0.0)T(0.0)QPIS(0.0)S(0.0)VGKPAS(0.0)VIK K:TMT10,s:Phosphorylated S RBBP6 202473.6 13 20 27.1 935.6 HUMAN 1 -9.7053 5.9007 WDLKNMRSPIATIRT-p Q9Y2I8-2;S401-p WDLKNMRSPIATIRT 0.930321047859488 0.662535323082498 0.0136666666666667 0.059 0.62296986456355 2.44859051654069 0.0136666666666667 0.059 0.866369218171411 0.569037579498797 0.17643287378894 0.60592692010979 Q9Y2I8 WDR37 Q9Y2I8.2.S401.p_WDR37 Q9Y2I8-2_S401s _1_1_401_401 Q9Y2I8-2 Q9Y2I8-2 Isoform 2 of WD repeat-containing protein 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11059.11059.3 10.17 6.28 3.92 2 1 1 0 489.9289 1387.8041 S401s TMT10 398 (K) NMRsPIATIR (T) NMRS(0.99)PIAT(0.0)IR s:Phosphorylated S WDR37 55477.2 1 5 2625.1 76.51 HUMAN 1 0.623 2.4486 WDLVDAVTPGPQPTL-p Q27J81;T1054-p WDLVDAVTPGPQPTL 0.911753399332893 0.0875672560697815 0.021 -0.207 0.781399624239364 14.0025086619329 0.021 -0.207 0.835333767330681 0.0397877274031326 0.218108645605452 -2.69176401416888 Q27J81 INF2 Q27J81.T1054.p_INF2 Q27J81_T1054t _1_1_1054_1054 Q27J81 Q27J81|Q27J81-2 Inverted formin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.29213.29213.4 17.88 13.29 8.131 2 1 1 0 867.187 3385.759 T1054t TMT10 1046 (R) GWDLVDAVtPGPQPTLEQLEEGGPRPLER (R) GWDLVDAVT(0.99)PGPQPT(0.0)LEQLEEGGPRPLER t:Phosphorylated T INF2 136934.1 1 5 356.1 347.64 HUMAN 1 0.7814 -14.0025 WDPTPSHTPAGAATP-p O75533;T261-p WDPTPSHTPAGAATP 0.678226993977644 0.603604536116342 0.0673333333333333 -0.0563333333333333 3.15606778545217 2.97392554249962 0.0673333333333333 -0.0563333333333333 0.483496374035661 0.504205345579392 0.751937019476127 -0.715011434387919 O75533 SF3B1 O75533.T261.p_SF3B1 O75533_T261t _1_1_261_261 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.14926.14926.3 17.81 17.81 1.115 4 1 1 0 714.3507 2061.0715 T261t TMT10 253 (K) IWDPTPSHtPAGAATPGR (G) IWDPT(0.0)PS(0.0)HT(0.99)PAGAAT(0.0)PGR t:Phosphorylated T SF3B1 146569.5 3 16 53.1 735.77 HUMAN 1 3.1561 -2.9739 WDQTADQTPGATPKK-p O75533;T207-p WDQTADQTPGATPKK 0.357914508488374 0.773554432599902 0.135 -0.054 8.29405824475763 1.54286654684411 0.135 -0.054 0.148113340001534 0.700992457857708 1.68613720274111 -0.40496223763974 O75533 SF3B1 O75533.T207.p_SF3B1 O75533_T207t _1_1_207_207 O75533 O75533 Splicing factor 3B subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.9691.9691.3 20.31 17.57 5.854 3 1 1 0 737.3746 2130.1344 T207t TMT10 199 (R) RWDQTADQtPGATPK (K) RWDQT(0.0)ADQT(0.99)PGAT(0.0)PK K:TMT10,t:Phosphorylated T SF3B1 146569.5 9 8 53.1 735.77 HUMAN 1 8.2941 -1.5429 WDREKRLSFAVPFRE-p P78527;S893-p WDREKRLSFAVPFRE 0.972079580597398 0.0707168041636835 -0.0103333333333333 0.370666666666667 0.238907974223716 15.2939285458047 -0.0103333333333333 0.370666666666667 0.946475120938687 0.0295533791423576 -0.0703062421562912 2.93180237834367 P78527 PRKDC P78527.S893.p_PRKDC P78527_S893s _1_1_893_893 P78527 P78527|P78527-2 DNA-dependent protein kinase catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22485.22485.3 11.9 11.9 99 1 1 1 0 467.9252 1321.7942 S893s TMT10 891 (K) RLsFAVPFR (E) RLS(1.0)FAVPFR s:Phosphorylated S PRKDC 474044.1 4 5 362.1 342.68 HUMAN 1 -0.2389 15.2939 WDRPRWDSCDSLNGL-p Q8TE68;S580-p WDRPRWDSCDSLNGL 0.557684345085016 0.481858191958278 -0.109666666666667 -0.0846666666666667 4.68326744507561 4.23358395199228 -0.109666666666667 -0.0846666666666667 0.340152177523975 0.377260733501648 -1.04568183467815 -0.961354372174948 Q8TE68 EPS8L1 Q8TE68.S580.p_EPS8L1 Q8TE68_S580sS583s_2_2_580_583 Q8TE68 Q8TE68|B4DKV7 Epidermal growth factor receptor kinase substrate 8-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18611.18611.3 15.33 12.48 15.326 3 2 2 0 866.7151 2438.191 S580s S583s Hydrogen 578 (R) WDsCDsLNGLDPSEKEK (F) WDS(0.99)CDS(0.99)LNGLDPS(0.0)EKEK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S EPS8L1 80534.9 5 18 326.1 361.27 HUMAN 1 -4.6833 -4.2336 WDSKKHRSRDRKPGS-p Q9H7N4;S557-p WDSKKHRSRDRKPGS 0.10854647135141 0.464610588211785 0.378 -0.107 20.2182921844475 4.43946897129406 0.378 -0.107 0.00950978682103847 0.359793325791539 3.92595562089814 -1.00007291310779 Q9H7N4 SCAF1 Q9H7N4.S557.p_SCAF1 Q9H7N4_S557s _1_1_557_557 Q9H7N4 Q9H7N4 Splicing factor, arginine/serine-rich 19 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.2384.2384.5 7.89 5.41 7.886 5 1 1 0 382.3937 1827.9735 S557s Hydrogen 557 (R) sRDRKPGSHASSSAR (R) S(0.99)RDRKPGS(0.0)HAS(0.0)S(0.0)S(0.0)AR K:TMT10-Lys-Only,s:Phosphorylated S SCAF1 139895 1 9 76.1 647.25 HUMAN 1 20.2183 -4.4395 WDSSRDISR______-p P49760;S498-p WDSSRDISR______ 0.456773581770606 0.0910092046950652 -0.156333333333333 -0.435 6.27107233560587 13.7699304497939 -0.156333333333333 -0.435 0.235989546906784 0.0419765706286324 -1.33271261445987 -2.64921603686844 P49760 CLK2 P49760.S498.p_CLK2 P49760_S498s _1_1_498_498 P49760 P49760|P49760-3 Dual specificity protein kinase CLK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13293.13293.3 10.23 10.23 1.636 3 1 1 0 515.2548 1463.7804 S498s TMT10 490 (K) LWDSSRDIsR (-) LWDS(0.0)S(0.0)RDIS(0.99)R s:Phosphorylated S CLK2 60545.5 1 7 1587.1 129.39 HUMAN 1 -6.2711 -13.7699 WDTAEEDSGTDSEYD-p Q96K76;S1013-p WDTAEEDSGTDSEYD 0.488088514771249 0.889370351481175 -0.144333333333333 0.0175 5.7367269696322 0.715142363536504 -0.144333333333333 0.0175 0.266886928168373 0.84817557844865 -1.23751821031058 0.200795798775742 Q96K76 USP47 Q96K76.S1013.p_USP47 Q96K76_S1013sT1015t_2_2_1013_1015 Q96K76 Q96K76|Q96K76-4|Q96K76-2 Ubiquitin carboxyl-terminal hydrolase 47 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.15402.15402.3 8.83 8.83 1.235 7 2 2 0 1109.4789 3166.4791 S1013s T1015t TMT10 1003 (K) KETWDTAEEDsGtDSEYDESGK (S) KET(0.0)WDT(0.0)AEEDS(0.99)GT(0.99)DS(0.0)EY(0.0)DES(0.0)GK K:TMT10,s:Phosphorylated S,t:Phosphorylated T USP47 158677.8 5 12 770.1 227.83 HUMAN 2 -5.7367 0.7151 WDVNAALSDFEQLRQ-p Q6GQQ9;S39-p WDVNAALSDFEQLRQ 0.612310168463098 0.700618191746567 -0.100333333333333 -0.0423333333333333 3.94954165927278 2.12456319363994 -0.100333333333333 -0.0423333333333333 0.402759538056566 0.613117455409997 -0.907472101306679 -0.536150393683179 Q6GQQ9 OTUD7B Q6GQQ9.S39.p_OTUD7B Q6GQQ9_S39s _1_1_39_39 Q6GQQ9 Q6GQQ9|Q6GQQ9-2 OTU domain-containing protein 7B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.31747.31747.3 16.54 16.54 99 1 1 1 0 696.3307 2007.0133 S39s TMT10 31 (K) NWDVNAALsDFEQLR (Q) NWDVNAALS(1.0)DFEQLR s:Phosphorylated S OTUD7B 93208.9 1 1 1645.1 123.96 HUMAN 1 -3.9495 -2.1246 WEAESKLSFATCKS_-p Q9NYP9;S227-p WEAESKLSFATCKS_ 0.297363648018023 0.0716885574138465 -0.189666666666667 -0.227333333333333 9.90574573223295 15.2126558298006 -0.189666666666667 -0.227333333333333 0.102194006698604 0.0301116405167903 -1.96533982470938 -2.91649460315374 Q9NYP9 MIS18A Q9NYP9.S227.p_MIS18A Q9NYP9_S227s _1_1_227_227 Q9NYP9 Q9NYP9 Protein Mis18-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25612.25612.3 17.6 12.92 2.163 3 1 1 0 813.0978 2357.3142 S227s TMT10 219 (K) LWEAESKLsFATCK (S) LWEAES(0.0)KLS(0.99)FAT(0.0)CK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MIS18A 26833 4 5 1982.1 104.28 HUMAN 1 -9.9057 -15.2127 WEAKEDNSEGEEILE-p F5GWX5;S421-p WEAKEDNSEGEEILE 0.484727412479806 0.0345710246262005 0.101666666666667 0.304666666666667 5.79382412651264 19.6835415322809 0.101666666666667 0.304666666666667 0.263401101846446 0.0107558774857662 1.24774660934497 3.80787028602485 F5GWX5 CHD4 F5GWX5.S421.p_CHD4 F5GWX5_S421s _1_1_421_421 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.27260.27260.4 29.41 29.41 99 1 1 1 0 940.1315 3677.5329 S421s TMT10 418 (K) EDNsEGEEILEEVGGDLEEEDDHHMEFCR (V) EDNS(1.0)EGEEILEEVGGDLEEEDDHHMEFCR C:Carbamidomethylation,s:Phosphorylated S CHD4 218583 16 8 49.1 753.68 HUMAN 1 5.7938 19.6835 WEDDVNHSFAKQNSV-p Q9NQW6;S219-p WEDDVNHSFAKQNSV 0.519517124214582 0.00423666321237395 -0.123333333333333 -0.948 5.25185097451793 34.8937952998792 -0.123333333333333 -0.948 0.298411051209142 0.000324056300740975 -1.15001729382534 -8.05519736579587 Q9NQW6 ANLN Q9NQW6.S219.p_ANLN Q9NQW6_S219s _1_1_219_219 Q9NQW6 Q9NQW6|Q9NQW6-2 Anillin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.34091.34091.4 20.4 20.4 1.128 3 1 1 0 725.8571 2820.4391 S219s TMT10 202 (R) LANLAATICSWEDDVNHsFAK (Q) LANLAAT(0.0)ICS(0.0)WEDDVNHS(0.99)FAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ANLN 125566 1 17 68.1 675.08 HUMAN 1 -5.2519 -34.8938 WEELAKGSPHSVINI-p Q5VT06;S1061-p WEELAKGSPHSVINI 0.145152146047681 0.0144832167858916 -0.291 -0.424 17.0793172578662 25.4894876444263 -0.291 -0.424 0.0195915264217168 0.00282521325761637 -3.27827337559365 -5.16221867909391 Q5VT06 CEP350 Q5VT06.S1061.p_CEP350 Q5VT06_S1061s _1_1_1061_1061 Q5VT06 Q5VT06 Centrosome-associated protein 350 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.23074.23074.3 17.24 17.24 2.721 3 1 1 0 613.3373 1758.0314 S1061s TMT10 1060 (K) GsPHSVINIFTK (S) GS(0.99)PHS(0.0)VINIFT(0.0)K K:TMT10,s:Phosphorylated S CEP350 352521.4 2 8 265.1 395.34 HUMAN 1 -17.0793 -25.4895 WEFGKRDSLGAYASQ-p Q9C0C2;S893-p WEFGKRDSLGAYASQ 0.113112267835937 0.451351561810739 -0.339333333333333 -0.0756666666666667 19.7567259758864 4.60577605887028 -0.339333333333333 -0.0756666666666667 0.01057614514632 0.346276001580631 -3.82693456845169 -1.03109758923623 Q9C0C2 TNKS1BP1 Q9C0C2.S893.p_TNKS1BP1 Q9C0C2_S893s _1_1_893_893 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13550.13550.3 24.62 24.62 5.655 3 1 1 0 921.1107 2681.3531 S893s TMT10 891 (K) RDsLGAYASQDANEQGQDLGK (R) RDS(0.99)LGAY(0.0)AS(0.0)QDANEQGQDLGK K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 37 34 4.1 2105.7 HUMAN 1 -19.7567 -4.6058 WEFRKRDSQGTYSSR-p Q9C0C2;S851-p WEFRKRDSQGTYSSR 0.149081489852703 0.0290951014919983 -0.339333333333333 -0.553666666666667 16.6691157740736 20.7957995292579 -0.339333333333333 -0.553666666666667 0.0215322008687888 0.00832568637309003 -3.19774538939523 -4.0478757291281 Q9C0C2 TNKS1BP1 Q9C0C2.S851.p_TNKS1BP1 Q9C0C2_S851s _1_1_851_851 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8154.8154.5 15.78 13.65 2.295 5 1 1 0 694.5557 3388.7813 S851s TMT10 848 (R) KRDsQGTYSSRDAELQDQEFGKR (D) KRDS(0.99)QGT(0.0)Y(0.0)S(0.0)S(0.0)RDAELQDQEFGKR K:TMT10,s:Phosphorylated S TNKS1BP1 182819.3 14 30 4.1 2105.7 HUMAN 1 -16.6691 -20.7958 WEGAAPQSPSFSGSE-p Q13425;S222-p WEGAAPQSPSFSGSE 0.212087105290786 0.371030429530453 -0.345666666666667 -0.0873333333333333 13.0026146267723 5.71151473279406 -0.345666666666667 -0.0873333333333333 0.0500885589643576 0.268440801422736 -2.51153807506711 -1.2327168049125 Q13425 SNTB2 Q13425.S222.p_SNTB2 Q13425_S222s _1_1_222_222 Q13425 Q13425|Q13425-2 Beta-2-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.27315.27315.5 26.22 26.22 1.754 10 1 1 0 975.1108 4791.5539 S222s TMT10 199 (R) EVTPYIKKPSLVSDLPWEGAAPQsPSFSGSEDSGSPK (H) EVT(0.0)PY(0.0)IKKPS(0.0)LVS(0.0)DLPWEGAAPQS(0.99)PS(0.0)FS(0.0)GS(0.0)EDS(0.0)GS(0.0)PK K:TMT10,s:Phosphorylated S SNTB2 58405 9 7 637.1 255.93 HUMAN 1 -13.0026 -5.7115 WEGGDSNSDDYDLES-p Q8WWM7-3;S238-p WEGGDSNSDDYDLES 0.668062231327386 0.903973840228764 -0.0613333333333333 -0.017 3.27702487230073 0.611182858224518 -0.0613333333333334 -0.017 0.470216119128727 0.868723788695436 -0.776138804695747 -0.173270477168319 Q8WWM7 ATXN2L Q8WWM7.3.S238.p_ATXN2L Q8WWM7-3_S238s_1_1_238_238 Q8WWM7-3 Q8WWM7|H3BUF6|Q8WWM7-2|Q8WWM7-9|Q8WWM7-4|Q8WWM7-5|Q8WWM7-8|Q8WWM7-6|Q8WWM7-7|Q8WWM7-3 Isoform 3 of Ataxin-2-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.32402.32402.4 23.83 23.83 2.215 5 1 1 0 949.6417 3698.5576 S238s M247m N249n TMT10 231 (R) WEGGDSNsDDYDLESDmSnGWDPNEMFK (F) WEGGDS(0.0)N(0.0)S(0.99)DDY(0.0)DLES(0.0)DM(0.99)S(0.0)N(0.99)GWDPN(0.0)EM(0.0)FK K:TMT10,s:Phosphorylated S,m:Oxidized methionine,n:Deamidated ATXN2L 116093.7 22 8 184.1 476.17 HUMAN 1 -3.277 -0.6112 WEKARPEYMLPVHFY-p P11216;Y197-p WEKARPEYMLPVHFY 0.135881864802706 0.280627893797049 0.257666666666667 0.208333333333333 17.7780640097742 7.27265139227468 0.257666666666667 0.208333333333333 0.0166799060073229 0.187385016270908 3.41748823186341 1.50822695687348 P11216 PYGB P11216.Y197.p_PYGB P11216_Y197y _1_1_197_197 P11216 P11216 Glycogen phosphorylase, brain form GG20160819_MSz_CCLE_T4D7_pY_Injection_02.22570.22570.3 16.3 16.3 8.637 2 1 1 0 682.3394 1965.0366 Y197y TMT10 193 (K) ARPEyMLPVHFYGR (V) ARPEY(0.99)MLPVHFY(0.0)GR y:Phosphorylated Y PYGB 97378.8 2 2 87.1 30.87 HUMAN 1 17.7781 7.2727 WEKPSDDSFQKSEAQ-p Q9Y2W6;S278-p WEKPSDDSFQKSEAQ 0.110850218289676 0.0240816793421373 -0.538 -0.42 19.9859410135595 22.0542901682915 -0.538 -0.42 0.0100324244665465 0.00623118984658704 -3.87593380751815 -4.32976197003511 Q9Y2W6 TDRKH Q9Y2W6.S278.p_TDRKH Q9Y2W6_S278s _1_1_278_278 Q9Y2W6 F6TB26|Q9Y2W6|Q5SZR4|Q9Y2W6-3 Tudor and KH domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.15087.15087.3 14.04 14.04 1.308 3 1 1 0 803.0648 2327.2123 S278s TMT10 268 (K) EGSWEKPSDDsFQK (S) EGS(0.0)WEKPS(0.0)DDS(0.99)FQK K:TMT10,s:Phosphorylated S TDRKH 62444.3 4 3 2676.1 74.3 HUMAN 1 -19.9859 -22.0543 WELINSEYFSEGRRR-p A0A087X1U6;Y841-p WELINSEYFSEGRRR 0.24274860516399 0.3459130778099 0.632 0.188 11.7625466447952 6.11009802229759 0.632 0.188 0.0666415877254639 0.244900796596472 2.29028645751824 1.30383745284011 A0A087X1U6 EPPK1 A0A087X1U6.Y841.p_EPPK1 A0A087X1U6_Y841y_1_1_841_841 A0A087X1U6 P58107|A0A087X1U6|A0A075B730 Epiplakin GG20160819_MSz_CCLE_T4D7_pY_Injection_01.38063.38112.3 7.04 7.04 7.036 4 1 1 0 1042.5 3044.5652 N838n Y841y TMT10 826 (R) FQGQRVSAWELInSEyFSEGRRR (Q) FQGQRVS(0.0)AWELIN(1.0)S(0.0)EY(0.99)FS(0.0)EGRRR n:Deamidated,y:Phosphorylated Y EPPK1 558101.4 2 1 164.1 20.61 HUMAN 1 11.7625 6.1101 WEPAAGNSPARASVP-p Q8IY33;S294-p WEPAAGNSPARASVP 0.850252688548194 0.0264325817251409 0.032 -0.325 1.36401221291666 21.4235481377671 0.032 -0.325 0.730463935359448 0.00720518582960893 0.362849478754973 -4.18706073062448 Q8IY33 MICALL2 Q8IY33.S294.p_MICALL2 Q8IY33_S294s _1_1_294_294 Q8IY33 Q8IY33|Q8IY33-5|Q8IY33-2|Q8IY33-4 MICAL-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.8341.8341.3 16.39 8.34 14.516 2 1 1 0 649.6525 1866.9772 S294s TMT10 282 (K) ARPSAWEPAAGNsPAR (A) ARPS(0.0)AWEPAAGNS(0.99)PAR s:Phosphorylated S MICALL2 98299.3 2 18 387.1 332.82 HUMAN 1 1.364 -21.4235 WEQTQKIYNCHVLLN-p Q86X76-3;Y160-p WEQTQKIYNCHVLLN 0.9215282521125 0.082854958614293 0.0146666666666667 0.219333333333333 0.697071647363272 14.3218189668208 0.0146666666666667 0.219333333333333 0.851712135481402 0.036967331611962 0.196064937995674 2.75050267661562 Q86X76 NIT1 Q86X76.3.Y160.p_NIT1 Q86X76-3_Y160y _1_1_160_160 Q86X76-3 Q86X76-3|Q86X76-4|Q86X76-2 Isoform 4 of Deaminated glutathione amidase GG20160819_MSz_CCLE_T4D7_pY_Injection_01.18592.18592.3 12.89 9.71 12.894 2 1 1 0 633.6706 1819.03 Y160y TMT10 159 (K) IyNCHVLLNSK (G) IY(0.99)NCHVLLNS(0.0)K C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y NIT1 41169.4 1 1 273.1 12.89 HUMAN 1 0.6971 14.3218 WESPAQNTAHLDQFE-p P17612;T38-p WESPAQNTAHLDQFE 0.488015843560099 0.327657775514947 0.132 -0.102 5.73986939085025 6.41611655410956 0.132 -0.102 0.266693886848327 0.228238205775071 1.23808152667592 -1.3580239916295 P17612 PRKACA P17612.T38.p_PRKACA P17612_T38t _1_1_38_38 P17612 P17612|P17612-2|Q15136 cAMP-dependent protein kinase catalytic subunit alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.14558.14558.4 17.78 17.78 1.891 2 1 1 0 649.5745 2515.3094 T38t TMT10 30 (K) KWESPAQNtAHLDQFER (I) KWES(0.0)PAQNT(0.99)AHLDQFER K:TMT10,t:Phosphorylated T PRKACA 40703 1 1 1853.1 110.97 HUMAN 1 5.7399 -6.4161 WESRIYASEEDD___-p Q8IVT2;S675-p WESRIYASEEDD___ 0.356108068197239 0.361210604506715 -0.164333333333333 -0.121666666666667 8.33353622028426 5.86740342375951 -0.164333333333333 -0.121666666666667 0.146773069885721 0.258976082834978 -1.69297645473437 -1.26061267099313 Q8IVT2 MISP Q8IVT2.S675.p_MISP Q8IVT2_S675s _1_1_675_675 Q8IVT2 Q8IVT2 Mitotic interactor and substrate of PLK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12918.12918.2 7.06 7.06 7.056 2 1 1 0 625.7559 1170.5364 S675s TMT10 672 (R) IYAsEEDD (-) IY(0.0)AS(0.99)EEDD s:Phosphorylated S MISP 75526.3 1 18 490.1 294.31 HUMAN 1 -8.3335 -5.8674 WETPPPESPRLGGST-p Q13884;S219-p WETPPPESPRLGGST 0.198398862430063 0.752157177825645 0.216 -0.045 13.6780706055503 1.70899214566814 0.216 -0.045 0.0428738949441309 0.674684581582835 2.63399952023158 -0.44329746657037 Q13884 SNTB1 Q13884.S219.p_SNTB1 Q13884_S219s _1_1_219_219 Q13884 Q13884|Q13884-2 Beta-1-syntrophin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.18272.18272.3 22.94 17.32 2.173 4 1 1 0 863.4447 2508.3499 S219s TMT10 203 (K) KGSPVSEIGWETPPPEsPR (L) KGS(0.0)PVS(0.0)EIGWET(0.0)PPPES(0.99)PR K:TMT10,s:Phosphorylated S SNTB1 58402.4 2 2 2874.1 67.59 HUMAN 1 13.6781 -1.709 WFDGKEFSGNPIKVS-p P35637;S360-p WFDGKEFSGNPIKVS 0.263859982002435 0.0237673258330995 0.392 -0.516333333333333 10.9793863803056 22.1461101228794 0.392 -0.516333333333333 0.0798107444825543 0.00610083090176694 2.15249839678002 -4.35078090507577 P35637 FUS P35637.S360.p_FUS P35637_S360s _1_1_360_360 P35637 H3BPE7|P35637 RNA-binding protein FUS HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28374.28374.4 15.57 10.83 99 1 1 1 0 666.3522 2582.4222 S360s TMT10 349 (K) AAIDWFDGKEFsGNPIK (V) AAIDWFDGKEFS(1.0)GNPIK K:TMT10,s:Phosphorylated S FUS 53653.1 1 2 3015.1 63.2 HUMAN 1 10.9794 -22.1461 WFDLMGLSPDAPEDE-p O95372;S82-p WFDLMGLSPDAPEDE 0.965158113768205 0.285339211245573 0.013 0.164333333333333 0.296309888341069 7.18440479134059 0.013 0.164333333333333 0.934047604926519 0.191231539302456 0.0866739808697549 1.49283187403293 O95372 LYPLA2 O95372.S82.p_LYPLA2 O95372_S82s _1_1_82_82 O95372 O95372|Q5QPQ2|Q5QPQ3|Q5QPQ0|Q5QPN9 Acyl-protein thioesterase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.37320.37320.4 20.99 15.41 6.25 2 1 1 0 794.3818 3094.534 S82s TMT10 70 (K) MVMPSWFDLMGLsPDAPEDEAGIK (K) MVMPS(0.0)WFDLMGLS(0.99)PDAPEDEAGIK K:TMT10,s:Phosphorylated S LYPLA2 25078.9 1 1 4841.1 26.04 HUMAN 1 0.2963 7.1844 WGDGGENSPCNVVSK-p O00161;S110-p WGDGGENSPCNVVSK 0.363419774329538 0.201000978912197 0.136 -0.135 8.16076391600262 9.16649008750078 0.136 -0.135 0.152729738580935 0.121157691895803 1.66303789041002 -1.83651298156748 O00161 SNAP23 O00161.S110.p_SNAP23 O00161_S110s _1_1_110_110 O00161 O00161 Synaptosomal-associated protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21238.21238.5 29.36 29.36 2.658 9 1 1 0 986.0928 4846.4673 S110s TMT10 101 (K) TTWGDGGENsPCNVVSKQPGPVTNGQLQQPTTGAASGGYIK (R) T(0.0)T(0.0)WGDGGENS(0.99)PCNVVS(0.0)KQPGPVT(0.0)NGQLQQPT(0.0)T(0.0)GAAS(0.0)GGY(0.0)IK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SNAP23 23696 12 4 1061.1 182.1 HUMAN 1 8.1608 -9.1665 WGGHSPRSPRGWDQE-p Q86X29-6;S311-p WGGHSPRSPRGWDQE 0.450399926319744 0.458061127544578 -0.118 -0.144666666666667 6.39871692319968 4.51983717574366 -0.118 -0.144666666666667 0.229154456520952 0.353196411467225 -1.35529434835325 -1.01509253620386 Q86X29 LSR Q86X29.6.S311.p_LSR Q86X29-6_S308sS311s_2_2_308_311 Q86X29-6 Q86X29|Q86X29-4|Q86X29-3|S4R3V8|Q86X29-2|Q86X29-5|Q86X29-6 Isoform 6 of Lipolysis-stimulated lipoprotein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.15177.15177.5 10.31 5.19 7.951 3 2 2 0 897.819 4325.1299 S308s S311s TMT10 293 (R) GPALTPIRDEEWGGHsPRsPRGWDQEPAREQAGGGWR (A) GPALT(0.0)PIRDEEWGGHS(0.99)PRS(0.99)PRGWDQEPAREQAGGGWR s:Phosphorylated S LSR 54725.6 1 17 206.1 448.79 HUMAN 1 -6.3987 -4.5198 WGINMDES_______-p A6NHQ4;S379-p WGINMDES_______ 0.450058328130941 0.647008387381149 0.131666666666667 -0.0686666666666667 6.40520991988665 2.577330964155 0.131666666666667 -0.0686666666666667 0.228812111064574 0.552416832806677 1.35644158137947 -0.633091611961495 A6NHQ4 C17orf96 A6NHQ4.S379.p_C17orf96 A6NHQ4_S379s _1_1_379_379 A6NHQ4 A6NHQ4 Elongin BC and Polycomb repressive complex 2-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.32227.32227.2 8.96 8.96 99 1 1 1 0 704.2964 1327.619 S379s TMT10 371 (K) FWGINMDEs (-) FWGINMDES(1.0) s:Phosphorylated S EPOP 39948.7 1 3 4700.1 27.77 HUMAN 1 6.4052 -2.5773 WGLRFFRSPQQVLPS-p P22570-3;S353-p WGLRFFRSPQQVLPS 0.478855036748759 0.629513112786228 0.162666666666667 0.0536666666666667 5.88543292025457 2.7327322231485 0.162666666666667 0.0536666666666667 0.257903186450363 0.532999470624487 1.26412742114557 0.665495245389904 P22570 FDXR P22570.3.S353.p_FDXR P22570-3_S353s _1_1_353_353 P22570-3 P22570-3|A0A0A0MT64|P22570-7|A0A0A0MSZ4 Isoform 3 of NADPH:adrenodoxin oxidoreductase, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.20724.20724.3 10.53 10.53 3.758 2 1 1 0 680.6824 1960.0602 S353s TMT10 350 (R) FFRsPQQVLPSPDGR (R) FFRS(0.99)PQQVLPS(0.0)PDGR s:Phosphorylated S FDXR 58873.2 3 1 4168.1 36.29 HUMAN 1 5.8854 2.7327 WGLVAPISPGPLTPM-p P11137;S285-p WGLVAPISPGPLTPM 0.0946777628850844 0.344256773671317 -0.364666666666667 0.108333333333333 21.7816740324774 6.13480928717351 -0.364666666666667 0.108333333333333 0.00663487273153136 0.243511273132106 -4.27218149994896 1.30822557078274 P11137 MAP2 P11137.S285.p_MAP2 P11137_S285s_1_1_285_285 P11137 P11137|P11137-3 Microtubule-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.33571.33571.5 21.77 16.53 6.353 3 1 1 0 839.838 4099.2004 S285s M292m TMT10 264 (K) DWFIEMPTEAKKDEWGLVAPIsPGPLTPmR (E) DWFIEM(0.0)PT(0.0)EAKKDEWGLVAPIS(0.99)PGPLT(0.0)PM(0.99)R K:TMT10,s:Phosphorylated S,m:Oxidized methionine MAP2 199979.2 10 3 117.1 560.28 HUMAN 1 -21.7817 6.1348 WGNKLYDSGNFHQHQ-p Q9H707;S131-p WGNKLYDSGNFHQHQ 0.292839916577591 0.0780892130935687 -0.223666666666667 -0.413 10.0621111924949 14.6940255519581 -0.223666666666667 -0.413 0.0985800151927727 0.0339310613804133 -1.99250339855899 -2.81946600575943 Q9H707 ZNF552 Q9H707.S131.p_ZNF552 Q9H707_S131s_1_1_131_131 Q9H707 Q9H707|E7ETH6 Zinc finger protein 552 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9401.9401.4 8.2 8.2 2.456 2 1 1 0 673.8241 2611.3054 S131s N139n TMT10 128 (K) LYDsGNFHQHQnEHIGEK (P) LY(0.0)DS(0.99)GN(0.0)FHQHQN(0.99)EHIGEK K:TMT10,s:Phosphorylated S,n:Deamidated ZNF552 47452.6 2 5 3243.1 56.13 HUMAN 1 -10.0621 -14.694 WGPSPAASPESRKSA-p Q96JM3;S264-p WGPSPAASPESRKSA 0.288933529600576 0.0659085814849842 0.149666666666667 0.225333333333333 10.1681207614572 15.7136607427665 0.150071678546307 0.225333333333333 0.0962028468311004 0.026830818764248 2.0109345103403 3.01132044974644 Q96JM3 CHAMP1 Q96JM3.S264.p_CHAMP1 Q96JM3_S264s _1_1_264_264 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24748.24748.4 12.22 12.22 1.437 10 1 1 0 1062.76 4168.0461 S264s TMT10 230 (K) QSHFPETLGPPSASSPESPVLAASPEPWGPSPAAsPESR (K) QS(0.0)HFPET(0.0)LGPPS(0.0)AS(0.0)S(0.0)PES(0.0)PVLAAS(0.0)PEPWGPS(0.0)PAAS(0.99)PES(0.0)R s:Phosphorylated S CHAMP1 90067.4 1 8 25.1 950.05 HUMAN 1 10.1681 15.7137 WGQRFRYSYYDESQG-p Q9Y316-3;S203-p WGQRFRYSYYDESQG 0.115313884527732 0.64022604144687 -0.310333333333333 -0.0503333333333333 19.52298570797 2.63772765161069 -0.310333333333333 -0.0503333333333333 0.0111609568529721 0.544787626179373 -3.77731757303683 -0.64573414234049 Q9Y316 MEMO1 Q9Y316.3.S203.p_MEMO1 Q9Y316-3_S203s _1_1_203_203 Q9Y316-3 Q9Y316-3|Q9Y316-2 Isoform 3 of Protein MEMO1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17129.17348.3 9.38 9.38 3.994 6 1 1 0 762.343 2205.045 S203s TMT10 200 (R) FRYsYYDESQGEIYR (S) FRY(0.0)S(0.99)Y(0.0)Y(0.0)DES(0.0)QGEIY(0.0)R s:Phosphorylated S MEMO1 34692.6 1 1 5997.1 14.76 HUMAN 1 -19.523 -2.6377 WGRPRTFSLDAVPPD-p Q9BST9;S520-p WGRPRTFSLDAVPPD 0.79168437226244 0.0939911204648921 -0.0376666666666667 -0.189 1.95736464257841 13.5819825244244 -0.0376666666666667 -0.189 0.637182054273474 0.0438330557214025 -0.499339295809552 -2.61497272052871 Q9BST9 RTKN Q9BST9.S520.p_RTKN Q9BST9_S520s _1_1_520_520 Q9BST9 Q9BST9|Q9BST9-2|Q9BST9-3 Rhotekin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.16519.16519.2 19.78 19.78 2.59 3 1 1 0 924.4492 1767.9227 S520s TMT10 518 (R) TFsLDAVPPDHSPR (A) T(0.0)FS(0.99)LDAVPPDHS(0.0)PR s:Phosphorylated S RTKN 63465.1 8 7 1486.1 137.99 HUMAN 1 -1.9574 -13.582 WGSPCHLSGESVILL-p Q7Z5J4;S921-p WGSPCHLSGESVILL 0.555181493717949 0.0926271971810616 -0.0786666666666667 0.182333333333333 4.71972333337249 13.6664441378727 -0.0786666666666666 0.182333333333333 0.337308796179085 0.042988826125232 -1.05243624460834 2.63034605789811 Q7Z5J4 RAI1 Q7Z5J4.S921.p_RAI1 Q7Z5J4_S916sS921s_2_2_916_921 Q7Z5J4 Q7Z5J4|Q7Z5J4-2|A0A1W2PQJ7|Q7Z5J4-3|Q7Z5J4-4 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.30761.30761.3 11.28 11.28 1.259 6 2 2 0 1086.5271 3097.6392 S916s S921s TMT10 912 (K) AGWGsPCHLsGESVILLGPTVGTESK (V) AGWGS(0.99)PCHLS(0.99)GES(0.0)VILLGPT(0.0)VGT(0.0)ES(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RAI1 206315.3 2 27 142.1 522.21 HUMAN 1 -4.7197 13.6664 WGTSGQPSPSYDSSR-p Q99081-3;S67-p WGTSGQPSPSYDSSR 0.612310168463098 0.0377617688688658 -0.0713333333333333 -0.271333333333333 3.95025998447971 19.1137365238375 -0.0713333333333334 -0.271333333333333 0.402692926939987 0.0122638363783872 -0.907609760505956 -3.68801970969641 Q99081 TCF12 Q99081.3.S67.p_TCF12 Q99081-3_S67s _1_1_67_67 Q99081-3 Q99081-3 Isoform 3 of Transcription factor 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.10632.10632.3 20.32 20.32 3.841 10 1 1 0 775.3397 2244.0366 S67s TMT10 55 (R) GGTTSWGTSGQPsPSYDSSR (G) GGT(0.0)T(0.0)S(0.0)WGT(0.0)S(0.0)GQPS(0.99)PS(0.0)Y(0.0)DS(0.0)S(0.0)R s:Phosphorylated S TCF12 76072.1 4 2 1464.1 140.15 HUMAN 1 -3.9503 -19.1137 WGVYRSPSFGAGEGL-p Q96PE2;S420-p WGVYRSPSFGAGEGL 0.337603610474496 0.972347668669124 -0.183333333333333 0.00733333333333336 8.78339228613987 0.171780664239741 -0.183333333333333 0.00733333333333336 0.132330749227946 0.961218085576376 -1.77086781357275 0.0509127269423527 Q96PE2 ARHGEF17 Q96PE2.S420.p_ARHGEF17 Q96PE2_S420s _1_1_420_420 Q96PE2 Q96PE2 Rho guanine nucleotide exchange factor 17 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20559.20559.3 15.41 15.41 1.756 2 1 1 0 500.5863 1419.7793 S420s TMT10 418 (R) SPsFGAGEGLLR (S) S(0.0)PS(0.99)FGAGEGLLR s:Phosphorylated S ARHGEF17 223779.6 3 14 30.1 908.19 HUMAN 1 -8.7834 0.1718 WILGRKYSIFTEKDE-p Q9Y4P1;S34-p WILGRKYSIFTEKDE 0.904222813932841 0.0814348975501825 -0.0313333333333333 0.271 0.859321089981293 14.4415363764275 -0.0313333333333334 0.271 0.820479795652351 0.0359622091391789 -0.238208546235523 2.77262500872093 Q9Y4P1 ATG4B Q9Y4P1.S34.p_ATG4B Q9Y4P1_S34s _1_1_34_34 Q9Y4P1 Q9Y4P1-2|Q9Y4P1-6|F2Z2K8 Cysteine protease ATG4B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27695.27695.4 16.16 16.16 3.288 5 1 1 0 717.8894 2788.57 S34s TMT10 32 (R) KYsIFTEKDEILSDVASR (L) KY(0.0)S(0.99)IFT(0.0)EKDEILS(0.0)DVAS(0.0)R K:TMT10,s:Phosphorylated S ATG4B 45035.3 1 1 4266.1 34.5 HUMAN 1 -0.8593 14.4415 WIRQRSASVNKEPVS-p Q8WWI1-3;S1159-p WIRQRSASVNKEPVS 0.0871878154630908 0.163226288290066 -0.429 -0.16 22.5791946656801 10.3502313089453 -0.429 -0.16 0.00552179823297371 0.0922522291522185 -4.45564804593996 -2.04177026638526 Q8WWI1 LMO7 Q8WWI1.3.S1159.p_LMO7 Q8WWI1-3_S1159s _1_1_1159_1159 Q8WWI1-3 Q8WWI1|Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.21188.21188.3 15.53 15.53 2.105 3 1 1 0 741.7373 2143.2309 S1159s TMT10 1157 (R) SAsVNKEPVSLPGIMR (R) S(0.0)AS(0.99)VNKEPVS(0.0)LPGIMR K:TMT10,s:Phosphorylated S LMO7 154694.3 7 26 61.1 704.74 HUMAN 1 -22.5792 -10.3502 WIRSGTLSPEIFEKS-p O60673;S1724-p WIRSGTLSPEIFEKS 0.633387977519939 0.555711967263436 -0.0636666666666667 0.0666666666666667 3.69324467851163 3.43782232242666 -0.0639540944522184 0.0666666666666667 0.427243566874426 0.453124732735633 -0.858019255019377 0.807895320813169 O60673 REV3L O60673.S1724.p_REV3L O60673_S1724s _1_1_1724_1724 O60673 O60673|O60673-2 DNA polymerase zeta catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23015.23015.2 15.67 12.29 3.077 3 1 1 0 873.4594 1665.9464 S1724s TMT10 1720 (R) SGTLsPEIFEK (S) S(0.0)GT(0.0)LS(0.99)PEIFEK K:TMT10,s:Phosphorylated S REV3L 356192.6 2 8 524.1 282.7 HUMAN 1 -3.6932 3.4378 WISRTQESGDQDPQE-p E9PDI4;S499-p WISRTQESGDQDPQE 0.318473303803848 0.130628168200247 -0.163333333333333 0.279333333333333 9.29842227198021 11.6491466403489 -0.163333333333333 0.279333333333333 0.117532445549115 0.0684046044556039 -1.86003437340401 2.26915961549008 E9PDI4 NotFound E9PDI4.S499.p_NotFound E9PDI4_S499s _1_1_499_499 E9PDI4 E9PDI4|O00515 Ladinin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6439.6439.3 16.82 16.82 3.464 2 1 1 0 700.3278 2019.0031 S499s TMT10 496 (R) TQEsGDQDPQEAQK (A) T(0.0)QES(0.99)GDQDPQEAQK K:TMT10,s:Phosphorylated S LAD1 58791 1 9 769.1 228.41 HUMAN 1 -9.2984 11.6491 WKALERASFSKLKLQ-p Q9H8H3;S216-p WKALERASFSKLKLQ 0.698400439338318 0.142341815400068 -0.0563333333333334 -0.192 2.92903495333815 11.1577708153204 -0.0563333333333334 -0.192 0.509444062150496 0.0765989679901281 -0.70596126964165 -2.18277237625133 Q9H8H3 METTL7A Q9H8H3.S216.p_METTL7A Q9H8H3_S216s _1_1_216_216 Q9H8H3 Q9H8H3 Methyltransferase-like protein 7A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11553.11553.3 8.56 8.56 8.561 2 1 1 0 516.2855 1466.8731 S216s TMT10 211 (K) ALERAsFSK (L) ALERAS(0.99)FS(0.0)K K:TMT10,s:Phosphorylated S METTL7A 28832.1 1 2 4636.1 28.57 HUMAN 1 -2.929 -11.1578 WKAVPPVSPELRKPG-p Q96JM3;S416-p WKAVPPVSPELRKPG 0.754868620755395 0.278610598132371 0.046 0.124 2.33438377153582 7.31129775459202 0.046 0.124 0.584200094442911 0.185724939068805 0.581643269971014 1.51496433160863 Q96JM3 CHAMP1 Q96JM3.S416.p_CHAMP1 Q96JM3_S416s _1_1_416_416 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20256.20256.4 15.73 12.87 7.281 2 1 1 0 694.4004 2694.6071 S416s TMT10 411 (K) AVPPVsPELRKPGPPLSPEIR (S) AVPPVS(0.99)PELRKPGPPLS(0.0)PEIR K:TMT10,s:Phosphorylated S CHAMP1 90067.4 9 20 25.1 950.05 HUMAN 1 2.3344 7.3113 WKDPWRRSKSPKKKL-p E7ERS3;S546-p WKDPWRRSKSPKKKL 0.290027496028783 0.0391792782096996 -0.495666666666667 0.765 10.136572949691 18.8889925329492 -0.495666666666667 0.765 0.0969042233123382 0.0129151884264443 -2.00544815666117 3.64130024367094 E7ERS3 ZC3H18 E7ERS3.S546.p_ZC3H18 E7ERS3_S546s _1_1_546_546 E7ERS3 E7ERS3|Q86VM9 Zinc finger CCCH domain-containing protein 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10595.10595.5 7.75 3.95 99 1 1 1 0 500.2744 2417.3769 S546s TMT10 535 (K) RADEWKDPWRRsK (S) RADEWKDPWRRS(1.0)K K:TMT10,s:Phosphorylated S ZC3H18 109165.8 1 11 157.1 499.97 HUMAN 1 -10.1366 18.889 WKDWEDDSDEDMSNF-p A0A087WYT3;S117-p WKDWEDDSDEDMSNF 0.605923663471939 0.0719227742765794 0.136666666666667 0.333 4.02223462054631 15.1916106978562 0.136666666666667 0.333 0.396074185647499 0.0302579102402073 0.921377392389878 2.91253536626093 A0A087WYT3 PTGES3 A0A087WYT3.S117.p_PTGES3 A0A087WYT3_S117s _1_1_117_117 A0A087WYT3 A0A087WYT3|Q15185|Q15185-4|B4DDC6 Prostaglandin E synthase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36211.36211.4 24.14 24.14 5.857 3 1 1 0 983.4295 3850.7332 S117s TMT10 100 (K) LNWLSVDFNNWKDWEDDsDEDMSNFDR (F) LNWLS(0.0)VDFNNWKDWEDDS(0.99)DEDMS(0.0)NFDR K:TMT10,s:Phosphorylated S PTGES3 19439.9 29 4 1781.1 115.3 HUMAN 1 4.0222 15.1916 WKEFLGLSPFSLIKG-p Q7Z4H7;S387-p WKEFLGLSPFSLIKG 0.297330507583042 0.405351375147859 -0.211666666666667 0.0786666666666667 9.91379113759531 5.21947607391132 -0.211666666666667 0.0786666666666667 0.102004865194677 0.300643897285994 -1.96673684648969 1.14389049112804 Q7Z4H7 HAUS6 Q7Z4H7.S387.p_HAUS6 Q7Z4H7_S387s _1_1_387_387 Q7Z4H7 Q7Z4H7|Q5VY60|Q7Z4H7-2 HAUS augmin-like complex subunit 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.37057.37057.2 16.23 12.82 1.819 2 1 1 0 945.0319 1809.0926 S387s TMT10 382 (K) EFLGLsPFSLIK (G) EFLGLS(0.99)PFS(0.0)LIK K:TMT10,s:Phosphorylated S HAUS6 109703.4 2 1 1302.1 156.27 HUMAN 1 -9.9138 5.2195 WKEYKSDSGKPYYYN-p O75400;S194-p WKEYKSDSGKPYYYN 0.269642531977865 0.0241846702089274 -0.313 0.567 10.7866534528711 22.0298545920024 -0.313 0.567 0.0834323842699766 0.00626634844951031 -2.11877335664958 4.32417894231095 O75400 PRPF40A O75400.S194.p_PRPF40A O75400_S194s _1_1_194_194 O75400 O75400|O75400-3 Pre-mRNA-processing factor 40 homolog A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11222.11222.3 14.94 14.94 1.196 7 1 1 0 802.4034 2325.233 S194s TMT10 192 (K) SDsGKPYYYNSQTK (E) S(0.0)DS(0.99)GKPY(0.0)Y(0.0)Y(0.0)NS(0.0)QT(0.0)K K:TMT10,s:Phosphorylated S PRPF40A 109088.4 1 3 718.2 237.38 HUMAN 1 -10.7867 22.0299 WKGDKAKSESLELPQ-p Q15040;S13-p WKGDKAKSESLELPQ 0.392132533800439 0.475392129521584 -0.136666666666667 0.0763333333333333 7.49835899435219 4.30665496901895 -0.136666666666667 0.0763333333333333 0.177895146968255 0.370966338152714 -1.54799671749103 0.975137023319586 Q15040 JOSD1 Q15040.S13.p_JOSD1 Q15040_S13sS15s_2_2_13_15 Q15040 Q15040 Josephin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.19997.19997.4 10.37 7.06 10.058 3 2 2 0 771.6517 2923.6496 S13s S15s TMT10 11 (K) AKsEsLELPQAAPPQIYHEK (Q) AKS(0.99)ES(0.99)LELPQAAPPQIY(0.0)HEK K:TMT10,s:Phosphorylated S JOSD1 23482.7 1 2 3918.1 40.72 HUMAN 1 -7.4984 4.3067 WKGPQVSSALNLDTS-p Q09666;S5604-p WKGPQVSSALNLDTS 0.826766553707022 0.064314918973703 -0.038 0.231 1.59402623338627 15.8650375045793 -0.038 0.231 0.692783246532101 0.0259117204454791 -0.416893429826514 3.04019297846202 Q09666 AHNAK Q09666.S5604.p_AHNAK Q09666_S5604s _1_1_5604_5604 Q09666 Q09666 Neuroblast differentiation-associated protein AHNAK HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.19642.19642.3 9.23 9.23 1.133 4 1 1 0 652.3479 1875.0588 S5604s TMT10 5599 (K) GPQVSsALNLDTSK (F) GPQVS(0.0)S(0.99)ALNLDT(0.0)S(0.0)K K:TMT10,s:Phosphorylated S AHNAK 629603.7 1 149 1.1 4313.36 HUMAN 1 -1.594 15.865 WKKLGEESGDEIDVP-p Q15051;S572-p WKKLGEESGDEIDVP 0.873798109188382 0.720957567902031 0.023 -0.0376666666666666 1.14740527910968 1.95875998264362 0.023 -0.0376666666666666 0.767820091504581 0.636977367620797 0.310455463466705 -0.499592081940462 Q15051 IQCB1 Q15051.S572.p_IQCB1 Q15051_S572s_1_1_572_572 Q15051 Q15051|Q15051-2 IQ calmodulin-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.36824.36824.5 23.77 23.77 6.266 3 1 1 0 894.081 4385.4149 S572s N589n TMT10 567 (K) KLGEEsGDEIDVPKDELSIELEnLFIGGTKPP (-) KLGEES(0.99)GDEIDVPKDELS(0.0)IELEN(1.0)LFIGGT(0.0)KPP K:TMT10,s:Phosphorylated S,n:Deamidated IQCB1 69384.3 2 1 5025.1 23.77 HUMAN 1 1.1474 -1.9588 WKNKSNESVDIQDQE-p Q5UIP0;S1579-p WKNKSNESVDIQDQE 0.191011115230049 0.0178856638444567 -0.250333333333333 -0.356333333333333 14.0570856107035 24.0665644627956 -0.250333333333333 -0.356333333333333 0.0392908513291119 0.00392051891697551 -2.70340553404815 -4.80547706307585 Q5UIP0 RIF1 Q5UIP0.S1579.p_RIF1 Q5UIP0_S1579s _1_1_1579_1579 Q5UIP0 Q5UIP0|Q5UIP0-2 Telomere-associated protein RIF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.10841.10841.2 18.22 18.22 4.075 2 1 1 0 1029.9865 1978.997 S1579s TMT10 1576 (K) SNEsVDIQDQEEK (V) S(0.0)NES(0.99)VDIQDQEEK K:TMT10,s:Phosphorylated S RIF1 276628.8 6 19 29.1 922.06 HUMAN 1 -14.0571 -24.0666 WKNNCPFSADENYRP-p E7ETA6;S960-p WKNNCPFSADENYRP 0.848463966183618 0.0640064607445197 -0.052 -0.243666666666667 1.37909977247509 15.8926084645867 -0.052 -0.243666666666667 0.72793067804485 0.0257477422858743 -0.366442748019648 -3.04546299680981 E7ETA6 PCM1 E7ETA6.S960.p_PCM1 E7ETA6_S960s _1_1_960_960 E7ETA6 Q15154|E7ETA6|Q15154-2|A6NNN6 Pericentriolar material 1 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.16049.16049.3 16.57 16.57 15.989 2 1 1 0 812.0602 2354.1963 S960s TMT10 955 (K) NNCPFsADENYRPLAK (T) NNCPFS(0.99)ADENY(0.0)RPLAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCM1 229381.8 3 29 13.1 1159.95 HUMAN 1 -1.3791 -15.8926 WKPEAGLSPPRKKRE-p O75764;S115-p WKPEAGLSPPRKKRE 0.80064254088907 0.0888522098155257 0.037 -0.216 1.85893599234693 13.9136423193148 0.037 -0.216 0.65178806050074 0.0406102598200937 0.477330717705002 -2.67548375694581 O75764 TCEA3 O75764.S115.p_TCEA3 O75764_S115s _1_1_115_115 O75764 O75764|O75764-2|S4R419 Transcription elongation factor A protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18423.18629.5 16.19 16.19 4.411 2 1 1 0 559.6973 2714.4903 S115s TMT10 102 (K) GLECSDWKPEAGLsPPRK (K) GLECS(0.0)DWKPEAGLS(0.99)PPRK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TCEA3 39712.7 8 2 925.1 199.8 HUMAN 1 1.8589 -13.9136 WKPFPAVSPEPRRPA-p Q96JM3;S297-p WKPFPAVSPEPRRPA 0.0732853965819104 0.0270287305178499 -0.385666666666667 -0.615666666666667 24.4092779284618 21.2808218097845 -0.385666666666667 -0.615666666666667 0.00362303231073456 0.00744591062578423 -4.89570412790969 -4.15517063750133 Q96JM3 CHAMP1 Q96JM3.S297.p_CHAMP1 Q96JM3_S297s _1_1_297_297 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19702.19702.5 20.42 20.42 9.779 4 1 1 0 643.5466 3133.7289 S297s TMT10 280 (R) KPSPSESPEPWKPFPAVsPEPR (R) KPS(0.0)PS(0.0)ES(0.0)PEPWKPFPAVS(0.99)PEPR K:TMT10,s:Phosphorylated S CHAMP1 90067.4 3 12 25.1 950.05 HUMAN 1 -24.4093 -21.2808 WKPGPPGSPRPWKSN-p Q96JM3;S319-p WKPGPPGSPRPWKSN 0.202089387369954 0.26591205382387 -0.24 0.155666666666667 13.4786783853088 7.57450547954776 -0.24 0.155666666666667 0.0448881969782296 0.174803229522737 -2.5976905885523 1.56078166642288 Q96JM3 CHAMP1 Q96JM3.S319.p_CHAMP1 Q96JM3_S319s _1_1_319_319 Q96JM3 Q96JM3 Chromosome alignment-maintaining phosphoprotein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16698.16698.5 17.76 14.91 5.945 3 1 1 0 636.1561 3096.7826 S319s TMT10 302 (R) RPAPAVSPGSWKPGPPGsPRPWK (S) RPAPAVS(0.0)PGS(0.0)WKPGPPGS(0.99)PRPWK K:TMT10,s:Phosphorylated S CHAMP1 90067.4 2 14 25.1 950.05 HUMAN 1 -13.4787 7.5745 WKPTHEDSKILLVDS-p Q9UKN8;S604-p WKPTHEDSKILLVDS 0.148724295141356 0.0139500776137436 -0.690666666666667 -0.649 16.6983426219519 25.7491446456525 -0.690666666666667 -0.649 0.0213877814584108 0.002661249148171 -3.20345461639391 -5.22926564324922 Q9UKN8 GTF3C4 Q9UKN8.S604.p_GTF3C4 Q9UKN8_S604s _1_1_604_604 Q9UKN8 Q9UKN8 General transcription factor 3C polypeptide 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.22911.22911.5 17.59 17.59 1.256 8 1 1 0 1045.5171 5143.6187 S604s TMT10 591 (K) TPSEALWKPTHEDsKILLVDSPGMGNADDEQQEEGTSSK (Q) T(0.0)PS(0.0)EALWKPT(0.0)HEDS(0.99)KILLVDS(0.0)PGMGNADDEQQEEGT(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S GTF3C4 93292.9 4 2 1958.1 105.19 HUMAN 1 -16.6983 -25.7491 WKREPGYTPPGAGNQ-p Q93052;T333-p WKREPGYTPPGAGNQ 0.532081809207476 0.074260353556074 0.0946666666666667 -0.197333333333333 5.07055286407846 14.9891599010007 0.0946666666666667 -0.197333333333333 0.311132023566808 0.0317018064329854 1.11697171698298 -2.87454425273081 Q93052 LPP Q93052.T333.p_LPP Q93052_T333t _1_1_333_333 Q93052 Q93052|A0A087WZF1|C9JUT4 Lipoma-preferred partner HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16932.16932.4 18.05 18.05 3.318 4 1 1 0 780.8892 3040.5715 T333t TMT10 328 (K) REPGYtPPGAGNQNPPGMYPVTGPK (K) REPGY(0.0)T(0.99)PPGAGNQNPPGMY(0.0)PVT(0.0)GPK K:TMT10,t:Phosphorylated T LPP 67171.5 7 4 1149.1 172.4 HUMAN 1 5.0706 -14.9892 WKSGEPQSDDIEASR-p Q05086;S16-p WKSGEPQSDDIEASR 0.412161436237322 0.126427538931054 0.120666666666667 0.410333333333333 7.09848232097571 11.8410854565679 0.120666666666667 0.410333333333333 0.195052610861868 0.0654472577620119 1.47824125162401 2.30304766250253 Q05086 UBE3A Q05086.S16.p_UBE3A Q05086_S11sS16sS22s_3_3_11_22 Q05086 Q05086 Ubiquitin-protein ligase E3A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.41160.41292.5 7.52 1 1.844 4 3 3 0 924.4444 4378.3206 S11s S16s S22s Acetyl 2 (M) EKLHQCYWKsGEPQsDDIEAsRMKRAAAK (H) EKLHQCY(0.0)WKS(0.99)GEPQS(0.99)DDIEAS(0.99)RMKRAAAK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S UBE3A 101655.7 1 3 4183.1 35.77 HUMAN 1 7.0985 11.8411 WKSVVSQSVCDYFFE-p Q9Y2T2;S27-p WKSVVSQSVCDYFFE 0.363321260043457 0.0828309888200893 -0.178 0.222333333333333 8.16434676741012 14.3234806614677 -0.178 0.222333333333333 0.15260379125134 0.0369531899018418 -1.66365894093388 2.75080935989615 Q9Y2T2 AP3M1 Q9Y2T2.S27.p_AP3M1 Q9Y2T2_S27s _1_1_27_27 Q9Y2T2 Q9Y2T2 AP-3 complex subunit mu-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28377.28377.3 21.62 21.62 2.539 4 1 1 0 854.4065 2481.2372 S27s TMT10 22 (K) SVVSQsVCDYFFEAQEK (A) S(0.0)VVS(0.0)QS(0.99)VCDY(0.0)FFEAQEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S AP3M1 47280.6 1 1 3366.1 52.8 HUMAN 1 -8.1643 14.3235 WKTYRRYSDFHDFHM-p Q9Y5W8;S614-p WKTYRRYSDFHDFHM 0.53618762558018 0.00539147169776956 -0.135 0.543333333333333 5.00936259732786 32.9220911677224 -0.135 0.543333333333333 0.315546770914795 0.000510259246311507 -1.105773579584 7.35966722715642 Q9Y5W8 SNX13 Q9Y5W8.S614.p_SNX13 Q9Y5W8_S614s _1_1_614_614 Q9Y5W8 Q9Y5W8|Q9Y5W8-2 Sorting nexin-13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.10581.10581.4 15.05 15.05 15.046 2 1 1 0 455.7034 1739.8274 S614s TMT10 612 (R) RYsDFHDFHMR (I) RY(0.0)S(0.99)DFHDFHMR s:Phosphorylated S SNX13 112814.1 1 2 5375.1 19.89 HUMAN 1 -5.0094 32.9221 WKWGQPPSPTPVPRP-p F5GWX5;S508-p WKWGQPPSPTPVPRP 0.240543868700249 0.309672409696437 -0.274666666666667 0.114333333333333 11.8262558605833 6.72823274054372 -0.274666666666667 0.114333333333333 0.0656711186144447 0.212410864231415 -2.30155463670376 1.41297751072254 F5GWX5 CHD4 F5GWX5.S508.p_CHD4 F5GWX5_S508s _1_1_508_508 F5GWX5 Q14839-2|A0A0C4DGG9|F5GWX5 Chromodomain-helicase-DNA-binding protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16820.16820.5 21.08 15.68 1.621 4 1 1 0 802.4189 3928.087 S508s TMT10 503 (K) WGQPPsPTPVPRPPDADPNTPSPKPLEGRPER (Q) WGQPPS(0.99)PT(0.0)PVPRPPDADPNT(0.0)PS(0.0)PKPLEGRPER K:TMT10,s:Phosphorylated S CHD4 218583 8 9 49.1 753.68 HUMAN 1 -11.8263 6.7282 WKYCRSISPEWKQQL-p O00159-3;S845-p WKYCRSISPEWKQQL 0.364451964751459 0.076763783434572 0.292333333333333 -0.490666666666667 8.13454438363918 14.7923331013075 0.292333333333333 -0.490666666666667 0.153654598321479 0.0331716206281324 1.6584927133444 -2.83777265753924 O00159 MYO1C O00159.3.S845.p_MYO1C O00159-3_S845s _1_1_845_845 O00159-3 O00159|O00159-3|F5H6E2|O00159-2 Isoform 3 of Unconventional myosin-Ic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18872.18872.4 15.06 15.06 1.115 2 1 1 0 592.5834 2287.3377 S845s TMT10 843 (R) SIsPEWKQQLQQK (A) S(0.0)IS(0.99)PEWKQQLQQK K:TMT10,s:Phosphorylated S MYO1C 120424.7 3 8 296.4 379.15 HUMAN 1 8.1345 -14.7923 WLCRIGRTGGPFQPL-p A0A087WVD1;T465-p WLCRIGRTGGPFQPL 0.605006246809024 0.626742135312566 0.192333333333333 -0.0666666666666667 4.03296408198918 2.7591549834347 0.192333333333333 -0.0666666666666667 0.395096872396007 0.529766511728892 0.923425492661849 -0.670964610622632 A0A087WVD1 LENG9 A0A087WVD1.T465.p_LENG9 A0A087WVD1_T465t _1_1_465_465 A0A087WVD1 A0A087WVD1 Leukocyte receptor cluster member 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.32352.32352.3 7.64 7.64 99 1 1 1 0 702.0406 2024.1378 T465t TMT10 462 (R) IGRtGGPFQPLAEIPLE (-) IGRT(1.0)GGPFQPLAEIPLE t:Phosphorylated T LENG9 51336.6 1 2 5028.1 23.74 HUMAN 1 4.033 -2.7592 WLDDLLASPPPSGGG-p Q9C0C2;S691-p WLDDLLASPPPSGGG 0.514684329842857 0.0033207682051555 -0.09 -0.627666666666667 5.32591807594386 37.1162450383214 -0.09 -0.627666666666667 0.29336492802045 0.000194256471624487 -1.16346305592709 -8.90692976675812 Q9C0C2 TNKS1BP1 Q9C0C2.S691.p_TNKS1BP1 Q9C0C2_S691s _1_1_691_691 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.30490.30490.3 19.21 19.21 9.515 2 1 1 0 673.3369 1938.0282 S691s TMT10 684 (R) WLDDLLAsPPPSGGGAR (R) WLDDLLAS(0.99)PPPS(0.0)GGGAR s:Phosphorylated S TNKS1BP1 182819.3 18 21 4.1 2105.7 HUMAN 1 -5.3259 -37.1162 WLDPSQKSPLHVGET-p O15164;S811-p WLDPSQKSPLHVGET 0.805217506652134 0.0148077240954323 0.0573333333333333 0.372 1.81293193286742 25.3370013272753 0.0573333333333333 0.372 0.658729035485226 0.00292617211428012 0.466964042525033 5.12313139285441 O15164 TRIM24 O15164.S811.p_TRIM24 O15164_S811s_1_1_811_811 O15164 O15164|O15164-2 Transcription intermediary factor 1-alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.19643.19643.5 10.68 7.45 1.185 2 1 1 0 935.235 4590.1725 S811s N825n N834n TMT10 811 (K) sPLHVGETRKEDDPnEDWCAVCQnGGELLCCEK (C) S(0.99)PLHVGET(0.0)RKEDDPN(1.0)EDWCAVCQN(1.0)GGELLCCEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated TRIM24 118769 9 9 598.1 263.51 HUMAN 1 1.8129 25.337 WLDSHLGSPGLKVTG-p P17097-2;S149-p WLDSHLGSPGLKVTG 0.148266672319898 0.575934082389911 -0.247 -0.0653333333333333 16.8044433644834 3.23040203420034 -0.247 -0.0653333333333333 0.0208715961815398 0.47529122534404 -3.22421683064806 -0.766720895787559 P17097 ZNF7 P17097.2.S149.p_ZNF7 P17097-2_S149s _1_1_149_149 P17097-2 P17097-2 Isoform 2 of Zinc finger protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.32621.32621.5 24.32 24.32 1.145 5 1 1 0 793.59 3883.9543 S149s TMT10 122 (R) ISPQDFPQNPGFGDVSDSEVWLDSHLGsPGLK (V) IS(0.0)PQDFPQNPGFGDVS(0.0)DS(0.0)EVWLDS(0.0)HLGS(0.99)PGLK K:TMT10,s:Phosphorylated S ZNF7 81567.3 1 42 240.47 415.72 HUMAN 1 -16.8044 -3.2304 WLEAVFGTPRRAGCP-p Q8N8D1;T153-p WLEAVFGTPRRAGCP 0.576602544846271 0.428133180051975 0.271 0.232 4.40017027880013 4.90543469925361 0.271 0.232 0.363063819432997 0.323188969701726 0.992890479631746 1.08648360875281 Q8N8D1 PDCD7 Q8N8D1.T153.p_PDCD7 Q8N8D1_T153t _1_1_153_153 Q8N8D1 Q8N8D1 Programmed cell death protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31949.31949.3 9.85 9.85 99 1 1 1 0 538.2746 1532.8423 T153t TMT10 145 (R) QWLEAVFGtPR (R) QWLEAVFGT(1.0)PR t:Phosphorylated T PDCD7 54984.2 1 1 6742.1 9.85 HUMAN 1 4.4002 4.9054 WLGGGSKSVPNTPLR-p Q15643;S1842-p WLGGGSKSVPNTPLR 0.399348827019039 0.020701873417672 0.124666666666667 -0.383333333333333 7.35516418223955 23.038514106147 0.124666666666667 -0.383333333333333 0.183858444604607 0.00496762254468754 1.52305070858789 -4.5584215796567 Q15643 TRIP11 Q15643.S1842.p_TRIP11 Q15643_S1842sT1846t_2_2_1842_1846 Q15643 Q15643 Thyroid receptor-interacting protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31434.31434.4 17.66 15.84 3.898 6 2 2 0 848.9321 3232.773 S1842s T1846t TMT10 1842 (K) sVPNtPLRPNQQSVVNSSFSELFVK (F) S(0.99)VPNT(0.99)PLRPNQQS(0.0)VVNS(0.0)S(0.0)FS(0.0)ELFVK K:TMT10,s:Phosphorylated S,t:Phosphorylated T TRIP11 228267 11 18 463.1 303.86 HUMAN 1 7.3552 -23.0385 WLGGPAASLSPPKGS-p Q5SXM2;S597-p WLGGPAASLSPPKGS 0.940998979952563 0.0312820317728164 -0.0123333333333333 -0.315666666666667 0.519408571464989 20.3253398582088 -0.0123333333333333 -0.315666666666667 0.887276834459266 0.00927824880123444 -0.148564472539913 -3.94535356768658 Q5SXM2 SNAPC4 Q5SXM2.S597.p_SNAPC4 Q5SXM2_S597s _1_1_597_597 Q5SXM2 Q5SXM2 snRNA-activating protein complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.19912.19912.5 18.13 14.66 1.25 6 1 1 0 642.3443 3127.7103 S597s TMT10 585 (R) GGAGAWLGGPAAsLSPPKGSSASQGGSK (E) GGAGAWLGGPAAS(0.99)LS(0.0)PPKGS(0.0)S(0.0)AS(0.0)QGGS(0.0)K K:TMT10,s:Phosphorylated S SNAPC4 160228.7 6 3 1272.1 159.49 HUMAN 1 -0.5194 -20.3253 WLKRDAESIHQYLLQ-p P55786;S904-p WLKRDAESIHQYLLQ 0.213229385106179 0.657961936101678 0.284 -0.0433333333333333 12.9424809014788 2.48604465005597 0.284 -0.0433333333333333 0.0507869240048482 0.564151224333217 2.50070743749544 -0.613860899154198 P55786 NPEPPS P55786.S904.p_NPEPPS P55786_S904s _1_1_904_904 P55786 P55786|E9PLK3|P55786-2 Puromycin-sensitive aminopeptidase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15789.15789.3 11.25 11.25 11.253 2 1 1 0 594.6314 1701.9122 S904s TMT10 901 (R) DAEsIHQYLLQR (K) DAES(0.99)IHQY(0.0)LLQR s:Phosphorylated S NPEPPS 103959 1 7 1607.1 127.86 HUMAN 1 12.9425 -2.486 WLLKNRFSSYTRLFS-p Q9NZI7;S383-p WLLKNRFSSYTRLFS 0.0370165952393706 0.090399041167398 -0.614 -0.199333333333333 32.758350026024 13.8093456374064 -0.614 -0.199333333333333 0.000529864712148114 0.0415973281529785 -7.31728218396699 -2.6564130301716 Q9NZI7 UBP1 Q9NZI7.S383.p_UBP1 Q9NZI7_S383s _1_1_383_383 Q9NZI7 Q9NZI7|Q9NZI7-4|F8WEP8 Upstream-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.6479.6479.3 9.03 9.03 9.027 4 1 1 0 447.2169 1259.6694 S383s TMT10 380 (K) NRFsSYTR (L) NRFS(0.99)S(0.0)Y(0.0)T(0.0)R s:Phosphorylated S UBP1 60946.4 1 3 3861.1 41.58 HUMAN 1 -32.7584 -13.8093 WLNDDLGSYQGAQGN-p Q8N6T3;S174-p WLNDDLGSYQGAQGN 0.380643803112374 0.703459159137277 0.118666666666667 0.057 7.74924316948959 2.09997200398942 0.118666666666667 0.057 0.167909660319336 0.616598976642778 1.59162854422187 0.530766697141803 Q8N6T3 ARFGAP1 Q8N6T3.S174.p_ARFGAP1 Q8N6T3_S174s _1_1_174_174 Q8N6T3 Q8N6T3-2 ADP-ribosylation factor GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.27999.27999.3 20.91 20.91 5.097 2 1 1 0 855.7089 2485.1581 S174s TMT10 163 (K) AFEDWLNDDLGsYQGAQGNR (Y) AFEDWLNDDLGS(0.99)Y(0.0)QGAQGNR s:Phosphorylated S ARFGAP1 45009.4 1 5 243.1 413.25 HUMAN 1 7.7492 2.1 WLRDPSASPGDAGEQ-p P18206-2;S290-p WLRDPSASPGDAGEQ 0.574777890570195 0.0168024029770629 0.0883333333333333 0.429333333333333 4.42362723144126 24.4951936178848 0.0883333333333334 0.429333333333333 0.361108138812969 0.00355206282264046 0.997288549786358 4.91108163478826 P18206 VCL P18206.2.S290.p_VCL P18206-2_S290s _1_1_290_290 P18206-2 P18206|P18206-2 Isoform 1 of Vinculin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.9377.9377.3 14.89 14.89 3.05 2 1 1 0 593.942 1699.8449 S290s TMT10 286 (R) DPSAsPGDAGEQAIR (Q) DPS(0.0)AS(0.99)PGDAGEQAIR s:Phosphorylated S VCL 117290.9 4 4 319.1 365.38 HUMAN 1 4.4236 24.4952 WLRGLDDSLQDYPFE-p Q969H4;S22-p WLRGLDDSLQDYPFE 0.978785641241596 0.273663994426268 -0.00533333333333333 -0.109666666666667 0.184327284953053 7.41384055679548 -0.00533333333333334 -0.109666666666667 0.958445166396896 0.181391087403852 -0.0545621306484679 -1.53282797246187 Q969H4 CNKSR1 Q969H4.S22.p_CNKSR1 Q969H4_S22s _1_1_22_22 Q969H4 Q969H4|Q969H4-2|B4DXN4|E9PS82 Connector enhancer of kinase suppressor of ras 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.33258.33258.3 20.43 14.61 2.842 2 1 1 0 921.11 2681.3499 S22s TMT10 18 (R) GLDDsLQDYPFEDWQLPGK (N) GLDDS(0.99)LQDY(0.0)PFEDWQLPGK K:TMT10,s:Phosphorylated S CNKSR1 80560.2 1 2 1912.1 107.86 HUMAN 1 -0.1843 -7.4138 WLVEAEISPELQKRL-p Q99835;S662-p WLVEAEISPELQKRL 0.675953190261373 0.299510975538384 0.0946666666666667 -0.123 3.18690659034021 6.9120381692592 0.0946666666666667 -0.123 0.48007527677185 0.203608630630467 0.758126065994164 -1.44521274553969 Q99835 SMO Q99835.S662.p_SMO Q99835_S662s _1_1_662_662 Q99835 Q99835 Smoothened homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36225.36225.5 29.98 28.17 4.977 4 1 1 0 955.5143 4693.5857 S662s TMT10 630 (R) GAILPQDISVTPVATPVPPEEQANLWLVEAEIsPELQKR (L) GAILPQDIS(0.0)VT(0.0)PVAT(0.0)PVPPEEQANLWLVEAEIS(0.99)PELQKR K:TMT10,s:Phosphorylated S SMO 87878.7 8 1 2012.1 102.4 HUMAN 1 3.1869 -6.912 WMEGGEMSPQVETSI-p Q96HW7;S935-p WMEGGEMSPQVETSI 0.690494213323385 0.421031848895568 -0.0626666666666667 0.112333333333333 3.01555112423881 4.9999166588857 -0.0626666666666667 0.112333333333333 0.499395802337456 0.31623383448613 -0.723569140689724 1.10381973917164 Q96HW7 INTS4 Q96HW7.S935.p_INTS4 Q96HW7_S935s_1_1_935_935 Q96HW7 Q96HW7|Q96HW7-4 Integrator complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28515.28515.4 23.94 23.94 3.429 5 1 1 0 976.9879 3808.9567 M934m S935s TMT10 926 (K) CPWMEGGEmsPQVETSIEGTIPFSKPVK (V) CPWM(0.0)EGGEM(0.99)S(0.99)PQVET(0.0)S(0.0)IEGT(0.0)IPFS(0.0)KPVK C:Carbamidomethylation,K:TMT10,m:Oxidized methionine,s:Phosphorylated S INTS4 109138.8 3 4 2294.1 89.39 HUMAN 1 -3.0156 4.9999 WMFKEDHSLEHRCVE-p P60520;S10-p WMFKEDHSLEHRCVE 0.0404299711718947 0.00245519972073641 -1.03033333333333 -0.989333333333333 31.1634578742549 40.0075430767143 -1.03033333333333 -0.989333333333333 0.000764987277694501 9.98264649864527e-05 -6.79406820264798 -10.1347552909248 P60520 GABARAPL2 P60520.S10.p_GABARAPL2 P60520_S10s _1_1_10_10 P60520 P60520|H3BSM5|H3BU36 Gamma-aminobutyric acid receptor-associated protein-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.13808.13808.4 15.87 15.87 99 1 1 1 0 539.0154 2073.074 S10s TMT10 3 (K) WMFKEDHsLEHR (C) WMFKEDHS(1.0)LEHR K:TMT10,s:Phosphorylated S GABARAPL2 13723.6 2 1 5848.1 15.87 HUMAN 1 -31.1635 -40.0075 WMFSNAKSPPHCELM-p J3QK89;S186-p WMFSNAKSPPHCELM 0.33004884700351 0.0224755319034756 0.143 0.337 8.99878146998154 22.5123804512288 0.143 0.337 0.125927868674865 0.00560740539155672 1.80815190447511 4.43525988632771 J3QK89 NotFound J3QK89.S186.p_NotFound J3QK89_S186s _1_1_186_186 J3QK89 J3QK89|Q8IWX8 Calcium homeostasis endoplasmic reticulum protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18797.18797.4 13.79 13.79 1.228 2 1 1 0 756.1169 2941.4788 S186s TMT10 178 (K) NWMFSNAKsPPHCELMAGHLR (N) NWMFS(0.0)NAKS(0.99)PPHCELMAGHLR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S CHERP 105388.1 2 1 2291.1 89.54 HUMAN 1 8.9988 22.5124 WMGRRPPSPEARGPV-p Q13505;S87-p WMGRRPPSPEARGPV 0.393895312924686 0.00800361410766806 0.215666666666667 0.566 7.46557222816212 29.8847603162437 0.215666666666667 0.566 0.179243236519397 0.00102689010337262 1.54228789220216 6.38706538299867 Q13505 MTX1 Q13505.S87.p_MTX1 Q13505_S87s _1_1_87_87 Q13505 Q13505|A0A0A0MRK6|Q13505-2|A0A0C4DFQ1 Metaxin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3979.3979.3 7.01 7.01 99 1 1 1 0 406.8781 1138.653 S87s TMT10 84 (R) RPPsPEAR (G) RPPS(1.0)PEAR s:Phosphorylated S MTX1 51704.1 1 1 4134.1 36.87 HUMAN 1 7.4656 29.8848 WNDFAEDSLRVIQHN-p O60313-10;S776-p WNDFAEDSLRVIQHN 0.244811243406061 0.512773021447991 0.265 -0.076 11.689410321746 3.89163671993121 0.265 -0.076 0.067773352296127 0.408165532533011 2.27736270846725 -0.89620958494292 O60313 OPA1 O60313.10.S776.p_OPA1 O60313-10_S776s _1_1_776_776 O60313-10 O60313-10|O60313-2|E5KLJ9|O60313-11|O60313-9|O60313-13 Isoform 4 of Dynamin-like 120 kDa protein, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.17102.17102.5 18.12 14.84 99 1 1 1 0 647.1287 3151.6438 S776s TMT10 767 (R) HKWNDFAEDsLRVIQHNALEDR (S) HKWNDFAEDS(1.0)LRVIQHNALEDR K:TMT10,s:Phosphorylated S OPA1 118312 1 6 1733.1 118.69 HUMAN 1 11.6894 -3.8916 WNLENRFSGWYDADL-p P18669;S23-p WNLENRFSGWYDADL 0.167300432977981 0.930411739133052 0.287333333333333 -0.0126666666666666 15.5242696861234 0.442388636889024 0.287333333333333 -0.0126666666666666 0.0280267688294578 0.903152599578778 2.97736894358433 -0.1274832760183 P18669 PGAM1 P18669.S23.p_PGAM1 P18669_S23s_1_1_23_23 P18669 P18669 Phosphoglycerate mutase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.22032.22032.5 24.6 19.55 1.478 4 1 1 0 763.3569 3731.7879 N20n S23s TMT10 11 (R) HGESAWNLEnRFsGWYDADLSPAGHEEAK (R) HGES(0.0)AWN(0.0)LEN(0.99)RFS(0.99)GWY(0.0)DADLS(0.0)PAGHEEAK K:TMT10,n:Deamidated,s:Phosphorylated S PGAM1 28917.5 2 2 1193.1 167.89 HUMAN 1 15.5243 -0.4424 WNPAMRRSLSVEHLE-p P26045;S357-p WNPAMRRSLSVEHLE 0.0868192866229433 0.137816436896592 -0.501666666666667 -0.169666666666667 22.6588473145633 11.3429257409967 -0.501666666666667 -0.169666666666667 0.00542144765002035 0.0734019209872482 -4.47423909198344 -2.21526486466407 P26045 PTPN3 P26045.S357.p_PTPN3 P26045_S357sS359s_2_2_357_359 P26045 P26045|J3KN34|P26045-2 Tyrosine-protein phosphatase non-receptor type 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.18260.18260.3 9.01 9.01 9.006 3 2 2 0 587.6275 1600.931 S357s S359s TMT10 357 (R) sLsVEHLETK (S) S(0.99)LS(0.99)VEHLET(0.0)K K:TMT10,s:Phosphorylated S PTPN3 105129.1 2 10 1253.1 161.68 HUMAN 1 -22.6588 -11.3429 WNPSSLPSP______-p Q8NHY6;S867-p WNPSSLPSP______ 0.996421434325015 0.321018665116152 0.000999999999999982 0.145333333333333 0.0293419006479958 6.52426548260417 0.000999999999999989 0.145333333333333 0.993266549653691 0.222624753570806 0.00883606551001859 1.37709858864186 Q8NHY6 ZFP28 Q8NHY6.S867.p_ZFP28 Q8NHY6_S867s _1_1_867_867 Q8NHY6 Q8NHY6 Zinc finger protein 28 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.35511.35511.2 14.71 14.71 7.232 3 1 1 0 777.3851 1473.7939 S867s TMT10 858 (K) FLWNPSSLPsP (-) FLWNPS(0.0)S(0.0)LPS(0.99)P s:Phosphorylated S ZFP28 100871.2 2 108 240.12 415.72 HUMAN 1 0.0293 6.5243 WNQNHFITPVSTLER-p Q99569;T1013-p WNQNHFITPVSTLER 0.578418926259303 0.349914166685273 -0.0893333333333333 0.0896666666666667 4.37275648835846 6.04667879040924 -0.0893333333333333 0.0896666666666667 0.365362820431767 0.248503277476557 -0.987744815953156 1.29256503689924 Q99569 PKP4 Q99569.T1013.p_PKP4 Q99569_T1013t _1_1_1013_1013 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19405.19405.3 13.2 13.2 1.975 3 1 1 0 865.4197 2514.2687 T1013t TMT10 1004 (K) DGWNQNHFItPVSTLERDR (F) DGWNQNHFIT(0.99)PVS(0.0)T(0.0)LERDR t:Phosphorylated T PKP4 132664.7 6 24 122.1 546.31 HUMAN 1 -4.3728 6.0467 WNSVSPASAGKRKTE-p Q86UE4;S311-p WNSVSPASAGKRKTE 0.130181909570289 0.0112906479422448 -0.321666666666667 -0.517666666666667 18.308727710204 27.2671752149949 -0.321666666666667 -0.517666666666667 0.0147613891302862 0.00187621445891978 -3.52501747438828 -5.63398719539613 Q86UE4 MTDH Q86UE4.S311.p_MTDH Q86UE4_S311s _1_1_311_311 Q86UE4 Q86UE4|E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15405.15405.3 14.49 14.49 2.623 3 1 1 0 547.9519 1561.8739 S311s TMT10 304 (K) WNSVSPAsAGK (R) WNS(0.0)VS(0.0)PAS(0.99)AGK K:TMT10,s:Phosphorylated S MTDH 63892.9 2 14 77.1 644.48 HUMAN 1 -18.3087 -27.2672 WPAVVVASPRPRTPV-p A0A1B0GTQ2;S96-p WPAVVVASPRPRTPV 0.801789763948685 0.571318292521259 0.0453333333333333 -0.092 1.84708640788524 3.27763038032026 0.0453333333333333 -0.092 0.653568871478859 0.470150564580939 0.474665471558935 -0.776144610175965 A0A1B0GTQ2 NotFound A0A1B0GTQ2.S96.p_NotFound A0A1B0GTQ2_S96s _1_1_96_96 A0A1B0GTQ2 A0A1B0GTQ2|A0A1B0GWB1|P0DI83 Ras-related protein Rab-34, isoform NARR HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25677.25677.3 15.24 15.24 6.692 3 1 1 0 742.7484 2146.2698 S96s TMT10 83 (R) VIVSSPWPAVVVAsPRPR (T) VIVS(0.0)S(0.0)PWPAVVVAS(0.99)PRPR s:Phosphorylated S RAB34 27183.8 1 2 4877.1 25.55 HUMAN 1 1.8471 -3.2776 WPFSGKTSPPCSPAN-p P49585;S343-p WPFSGKTSPPCSPAN 0.280686827338127 0.0311551446879021 0.153333333333333 0.360333333333333 10.4304208702521 20.3527524626885 0.153333333333333 0.360333333333333 0.0905644831549533 0.00921986906969379 2.05659868073612 3.95128624302052 P49585 PCYT1A P49585.S343.p_PCYT1A P49585_S343s _1_1_343_343 P49585 C9JEJ2|P49585 Choline-phosphate cytidylyltransferase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.9575.9987.2 11.83 3.55 1.435 4 1 1 0 798.3757 1515.7787 S343s TMT10 342 (K) TsPPCSPANLSR (H) T(0.0)S(0.99)PPCS(0.0)PANLS(0.0)R C:Carbamidomethylation,s:Phosphorylated S PCYT1A 42072.6 30 9 694.1 242.25 HUMAN 1 10.4304 20.3528 WPHLTRVTPMGGGCL-p Q8NEQ6;T96-p WPHLTRVTPMGGGCL 0.348913923564439 0.0290122281092194 -0.146333333333333 -0.321333333333333 8.49735658960727 20.8142022831207 -0.146333333333333 -0.321333333333333 0.141339757236177 0.00829048182770161 -1.72134887381535 -4.05191676823272 Q8NEQ6 C1orf64 Q8NEQ6.T96.p_C1orf64 Q8NEQ6_T96t_1_1_96_96 Q8NEQ6 Q8NEQ6 Steroid receptor-associated and regulated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7243.7243.4 9.19 3.41 3.691 2 1 1 0 614.3021 2358.2406 T96t M98m TMT10 95 (R) VtPmGGGCLAQARATLPLCR (G) VT(0.99)PM(1.0)GGGCLAQARAT(0.0)LPLCR C:Carbamidomethylation,t:Phosphorylated T,m:Oxidized methionine SRARP 18056.4 1 1 6833.1 9.19 HUMAN 1 -8.4974 -20.8142 WPLLRANSSGLYKCE-p Q9UID6;S200-p WPLLRANSSGLYKCE 0.159393285726736 0.154806212461727 0.338666666666667 -0.164333333333333 15.9734559105178 10.6547651581274 0.338666666666667 -0.164333333333333 0.0252728610106495 0.0860049572244041 3.06309519909497 -2.09482092625673 Q9UID6 ZNF639 Q9UID6.S200.p_ZNF639 Q9UID6_S200s _1_1_200_200 Q9UID6 Q9UID6 Zinc finger protein 639 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.19856.19856.3 16.77 16.77 1.117 4 1 1 0 925.4535 2694.3834 S200s TMT10 198 (R) ANsSGLYKCELCEFNSK (Y) ANS(0.99)S(0.0)GLY(0.0)KCELCEFNS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ZNF639 57593.9 8 4 2698.1 73.61 HUMAN 1 15.9735 -10.6548 WPQFEEWSLDTQRTI-p Q9UKS6;S303-p WPQFEEWSLDTQRTI 0.367665434510445 0.779921311521544 0.136666666666667 0.03 8.06396451673996 1.49452161420967 0.136666666666667 0.0300000000000001 0.156172135298045 0.708839382509426 1.64625496598282 0.39366180834563 Q9UKS6 PACSIN3 Q9UKS6.S303.p_PACSIN3 Q9UKS6_S303s _1_1_303_303 Q9UKS6 Q9UKS6 Protein kinase C and casein kinase substrate in neurons protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.26712.26712.3 16.63 16.63 1.329 4 1 1 0 1005.4461 2934.3501 S303s TMT10 286 (R) STHGPGMAMNWPQFEEWsLDTQR (T) S(0.0)T(0.0)HGPGMAMNWPQFEEWS(0.99)LDT(0.0)QR s:Phosphorylated S PACSIN3 48828.3 1 4 547.1 275.62 HUMAN 1 8.064 1.4945 WPQKSDRSIPQLDLG-p A6ND36;S127-p WPQKSDRSIPQLDLG 0.578846851201194 0.702827115548425 -0.0786666666666667 -0.0643333333333333 4.36697058049965 2.10515022842513 -0.0786666666666667 -0.0643333333333333 0.365849901085841 0.615864225157607 -0.986657988965893 -0.531901443412926 A6ND36 FAM83G A6ND36.S127.p_FAM83G A6ND36_S127s _1_1_127_127 A6ND36 A6ND36 Protein FAM83G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.27211.27211.3 11.71 11.71 1.175 4 1 1 0 838.0854 2432.2771 S127s TMT10 124 (K) SDRsIPQLDLGWPDTIAYR (G) S(0.0)DRS(0.99)IPQLDLGWPDT(0.0)IAY(0.0)R s:Phosphorylated S FAM83G 91118.6 3 2 1966.1 104.97 HUMAN 1 -4.367 -2.1052 WPVFEIPSPRPSKGN-p Q9Y6R4;S431-p WPVFEIPSPRPSKGN 0.197771061122644 0.0296156968330533 -0.634 0.304 13.7170003897462 20.6885668252224 -0.634 0.304 0.042491294394842 0.00853381684098635 -2.64110469369523 4.0243750114483 Q9Y6R4 MAP3K4 Q9Y6R4.S431.p_MAP3K4 Q9Y6R4_S431s _1_1_431_431 Q9Y6R4 Q9Y6R4|F5H538|Q9Y6R4-2|J3KNB8|F5H4R1|F5H1X6 Mitogen-activated protein kinase kinase kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.32455.32455.4 17.87 17.87 3.968 3 1 1 0 670.1088 2597.4492 S431s TMT10 418 (K) NLSDIGWPVFEIPsPRPSK (G) NLS(0.0)DIGWPVFEIPS(0.99)PRPS(0.0)K K:TMT10,s:Phosphorylated S MAP3K4 183393.1 6 3 1091.1 179.07 HUMAN 1 -13.717 20.6886 WQAFGDFSPTDVHKQ-p Q00653;S277-p WQAFGDFSPTDVHKQ 0.544463415002689 0.392059909450699 -0.0813333333333333 0.0906666666666667 4.87595783594077 5.40646883600796 -0.0813333333333334 0.0906666666666667 0.325390010857107 0.287973892282301 -1.08127694290234 1.17779684699147 Q00653 NFKB2 Q00653.S277.p_NFKB2 Q00653_S277s _1_1_277_277 Q00653 Q00653|Q00653-4|Q00653-3 Nuclear factor NF-kappa-B p100 subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27533.27533.3 18.96 18.96 2.912 3 1 1 0 1048.1316 3062.4209 S277s TMT10 262 (R) FYEDDENGWQAFGDFsPTDVHK (Q) FY(0.0)EDDENGWQAFGDFS(0.99)PT(0.0)DVHK K:TMT10,s:Phosphorylated S NFKB2 97432.1 2 3 2358.1 86.63 HUMAN 1 -4.876 5.4065 WQFLVQKSAEKSQKL-p A0A0D9SGF6;S1652-p WQFLVQKSAEKSQKL 0.103884021690019 0.0182634403489409 0.556666666666667 -0.455333333333333 20.7628730394454 23.9283349481062 0.556666666666667 -0.455333333333333 0.008389048323149 0.00404731032744227 4.04461772937519 -4.771752074876 A0A0D9SGF6 SPTAN1 A0A0D9SGF6.S1652.p_SPTAN1 A0A0D9SGF6_S1652s _1_1_1652_1652 A0A0D9SGF6 A0A0D9SGF6|Q13813-2|A0A0D9SF54|Q13813-3 Spectrin alpha chain, non-erythrocytic 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.33169.33169.4 17.48 17.48 99 1 1 1 0 704.1461 2733.5906 S1652s TMT10 1638 (R) LAALADQWQFLVQKsAEK (S) LAALADQWQFLVQKS(1.0)AEK K:TMT10,s:Phosphorylated S SPTAN1 288398.5 2 18 263.1 396.39 HUMAN 1 20.7629 -23.9283 WQGLKADTLKERYQK-p Q9Y6M4-4;T256-p WQGLKADTLKERYQK 0.603716896580728 0.143426554075721 0.243 -0.578666666666667 4.04615971198486 11.1093182847225 0.243 -0.578666666666667 0.393898229555961 0.0774583375188575 0.925942846654408 -2.17428061064948 Q9Y6M4 CSNK1G3 Q9Y6M4.4.T256.p_CSNK1G3 Q9Y6M4-4_T256t _1_1_256_256 Q9Y6M4-4 U3KQB3|A0A0U1RQY7|Q9Y6M4-2|Q8IXA3|A0A0U1RQT7|Q9Y6M4-4|Q9Y6M4-3|Q9HCP0|U3KQA5|P78368|Q9HCP0-2|Q9Y6M4-5|Q9Y6M4-6 Isoform 4 of Casein kinase I isoform gamma-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.19732.19732.4 9.72 7.52 3.171 2 1 1 0 642.3662 2486.4698 T256t TMT10 245 (R) GSLPWQGLKADtLKER (Y) GS(0.0)LPWQGLKADT(0.99)LKER K:TMT10,t:Phosphorylated T CSNK1G3 49482.7 1 1 3905.1 41.02 HUMAN 1 4.0462 -11.1093 WQHDLFDSGFGGGAG-p Q86V81;S94-p WQHDLFDSGFGGGAG 0.195954837597201 0.0386874564845144 -0.545666666666667 0.261666666666667 13.7928365477924 18.9663930205424 -0.545666666666667 0.261666666666667 0.0417557554329457 0.0126870513586905 -2.65496113224481 3.65735549660354 Q86V81 ALYREF Q86V81.S94.p_ALYREF Q86V81_S94s _1_1_94_94 Q86V81 E9PB61|Q86V81 THO complex subunit 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.24634.24634.5 23.8 23.8 5.718 2 1 1 0 694.9526 3390.7686 S94s TMT10 82 (K) QLPDKWQHDLFDsGFGGGAGVETGGK (L) QLPDKWQHDLFDS(0.99)GFGGGAGVET(0.0)GGK K:TMT10,s:Phosphorylated S ALYREF 26887.4 8 3 2379.1 85.93 HUMAN 1 -13.7928 18.9664 WQIVRRYSDFDLLNN-p Q7Z7A4;S57-p WQIVRRYSDFDLLNN 0.510819147882512 0.00383473386221413 0.0896666666666667 0.599666666666667 5.39175481459971 35.7689238090356 0.0896666666666667 0.599666666666667 0.288951210732143 0.000264915652389839 1.17538936941205 8.38163380686595 Q7Z7A4 PXK Q7Z7A4.S57.p_PXK Q7Z7A4_S57s _1_1_57_57 Q7Z7A4 Q7Z7A4|A0A0C4DG95|Q7Z7A4-4|W5RWE6|Q7Z7A4-2|H7BYG4|F8WDF7 PX domain-containing protein kinase-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.35343.35535.5 26.04 19.3 2.22 4 1 1 0 714.2028 3487.0291 S57s TMT10 55 (R) RYsDFDLLNNSLQIAGLSLPLPPKK (L) RY(0.0)S(0.99)DFDLLNNS(0.0)LQIAGLS(0.0)LPLPPKK K:TMT10,s:Phosphorylated S PXK 65519.4 5 1 2759.1 71.55 HUMAN 1 5.3918 35.7689 WQKINNFSADIKDSK-p P13797;S293-p WQKINNFSADIKDSK 0.125338530777651 0.0538593296308459 -0.851333333333333 0.466666666666667 18.7639339613385 16.9143673772713 -0.851333333333333 0.466666666666667 0.0132924980068631 0.0203499460534542 -3.61855495647297 3.2433318554343 P13797 PLS3 P13797.S293.p_PLS3 P13797_S293s _1_1_293_293 P13797 P13797|P13797-2|A0A0A0MSQ0|P13797-3 Plastin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20010.20010.2 13.75 7.69 99 1 1 1 0 780.4142 1479.8572 S293s TMT10 289 (K) INNFsADIK (D) INNFS(1.0)ADIK K:TMT10,s:Phosphorylated S PLS3 71323.2 3 1 3150.1 59.17 HUMAN 1 -18.7639 16.9144 WQQDLEDSVKPTQQA-p O43741;S69-p WQQDLEDSVKPTQQA 0.772184255224755 0.5720926476009 -0.044 -0.0646666666666666 2.14640172674162 3.26933276461849 -0.044 -0.0646666666666666 0.610042127967787 0.47104969132231 -0.540985075039774 -0.774491065969515 O43741 PRKAB2 O43741.S69.p_PRKAB2 O43741_S69s _1_1_69_69 O43741 O43741 5'-AMP-activated protein kinase subunit beta-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.21427.21427.4 18.63 18.63 2.83 4 1 1 0 874.7006 3415.8374 S69s TMT10 58 (K) EFVSWQQDLEDsVKPTQQARPTVIR (W) EFVS(0.0)WQQDLEDS(0.99)VKPT(0.0)QQARPT(0.0)VIR K:TMT10,s:Phosphorylated S PRKAB2 30415.8 1 2 1446.1 140.95 HUMAN 1 -2.1464 -3.2693 WQREREDSGDAEAHA-p Q9NPI1-2;S279-p WQREREDSGDAEAHA 0.551971890181795 0.0124991814907293 -0.0943333333333334 0.503666666666667 4.76278679546984 26.5515874054949 -0.0943333333333334 0.503666666666667 0.333980661415341 0.00221228594115741 -1.06040264885657 5.44044152490744 Q9NPI1 BRD7 Q9NPI1.2.S279.p_BRD7 Q9NPI1-2_S279s _1_1_279_279 Q9NPI1-2 Q9NPI1-2 Isoform 2 of Bromodomain-containing protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.7580.7580.3 18.46 18.46 99 1 1 1 0 700.6644 2020.0136 S279s TMT10 275 (R) EREDsGDAEAHAFK (S) EREDS(1.0)GDAEAHAFK K:TMT10,s:Phosphorylated S BRD7 74721.8 12 3 1237.1 163.17 HUMAN 1 -4.7628 26.5516 WRAARMKSLEQDALR-p A0A0G2JPP5;S1508-p WRAARMKSLEQDALR 0.948846569796209 0.158750952417644 -0.0143333333333334 -0.281333333333333 0.451831372151906 10.5149085412046 -0.0143333333333334 -0.281333333333333 0.901191035103132 0.0888196680803534 -0.130094536384101 -2.07044085323882 A0A0G2JPP5 SCRIB A0A0G2JPP5.S1508.p_SCRIB A0A0G2JPP5_S1508s _1_1_1508_1508 A0A0G2JPP5 Q14160-3|A0A0G2JPP5|A0A0G2JNZ2|Q14160-2 Protein scribble homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12218.12423.2 11.95 3.14 99 1 1 1 0 620.8105 1160.6473 S1508s TMT10 1508 (K) sLEQDALR (A) S(1.0)LEQDALR s:Phosphorylated S SCRIB 178690.9 5 37 22.1 1004.81 HUMAN 1 -0.4518 -10.5149 WRATWLLSPEKKVL_-p Q96GQ5;S462-p WRATWLLSPEKKVL_ 0.462914985842141 0.147144465082663 -0.116 -0.151 6.17302945011866 10.9566685643956 -0.116 -0.151 0.241377650116006 0.0802293259658268 -1.31532936048678 -2.14755594683607 Q96GQ5 C16orf58 Q96GQ5.S462.p_C16orf58 Q96GQ5_S462s _1_1_462_462 Q96GQ5 Q96GQ5|H3BSM7|H3BR29|Q96GQ5-2 RUS1 family protein C16orf58 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.21577.21577.3 11.68 11.68 4.577 2 1 1 0 647.3789 1860.1562 S462s TMT10 457 (R) ATWLLsPEKK (V) AT(0.0)WLLS(0.99)PEKK K:TMT10,s:Phosphorylated S C16orf58 51473.3 2 1 5597.1 17.81 HUMAN 1 -6.173 -10.9567 WRERYEDSQQEEAQY-p Q14980;S820-p WRERYEDSQQEEAQY 0.126203683087079 0.00154667064918984 0.270333333333333 0.925333333333333 18.6758307871304 45.2295193662391 0.270333333333333 0.925333333333334 0.0135649101443631 2.99949445471083e-05 3.60035538627518 12.7535511751478 Q14980 NUMA1 Q14980.S820.p_NUMA1 Q14980_S820s _1_1_820_820 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-3|Q14980-4 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27955.27955.5 28.1 28.1 5.438 4 1 1 0 899.8228 4415.1085 S820s TMT10 815 (R) ERYEDsQQEEAQYGAMFQEQLMTLKEECEK (A) ERY(0.0)EDS(0.99)QQEEAQY(0.0)GAMFQEQLMT(0.0)LKEECEK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NUMA1 239339.3 32 9 31.1 900.97 HUMAN 1 18.6758 45.2295 WRGQLKKSPEALKCR-p Q92794;S954-p WRGQLKKSPEALKCR 0.340950182860122 0.0184174230513839 -0.267666666666667 -0.474 8.68869394598197 23.8739664928167 -0.267666666666667 -0.474 0.135247923319139 0.00409829626933076 -1.75447519754498 -4.75853116042973 Q92794 KAT6A Q92794.S954.p_KAT6A Q92794_S954s _1_1_954_954 Q92794 Q92794 Histone acetyltransferase KAT6A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10064.10064.2 8.11 4.3 99 1 1 1 0 770.4583 1459.9451 S954s TMT10 953 (K) KsPEALK (C) KS(1.0)PEALK K:TMT10,s:Phosphorylated S KAT6A 227705.4 4 14 903.1 203.52 HUMAN 1 -8.6887 -23.874 WRGWRKQSAGPNSPT-p A7E2V4-4;S48-p WRGWRKQSAGPNSPT 0.171306633335012 0.00404124447761282 0.361666666666667 0.840666666666667 15.269245438271 35.281814877062 0.361666666666667 0.840666666666667 0.0297218238650592 0.000296359267234794 2.92910258009776 8.19854019600082 A7E2V4 ZSWIM8 A7E2V4.4.S48.p_ZSWIM8 A7E2V4-4_S48s _1_1_48_48 A7E2V4-4 A7E2V4-2|A7E2V4-4|A7E2V4-3 Isoform 4 of Zinc finger SWIM domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.4565.4565.4 20.14 20.14 2.297 5 1 1 0 596.2944 2302.19 S48s TMT10 46 (R) KQsAGPNSPTGGGGGGGSGGTR (M) KQS(0.99)AGPNS(0.0)PT(0.0)GGGGGGGS(0.0)GGT(0.0)R K:TMT10,s:Phosphorylated S ZSWIM8 199945.4 1 1 805.1 222.5 HUMAN 1 15.2692 35.2818 WRLNERHYGGLTGLN-p P18669;Y92-p WRLNERHYGGLTGLN 0.689263932435993 0.0263581786161247 -0.0706666666666667 0.290333333333333 3.03330223610453 21.4560256485814 -0.0706666666666667 0.290333333333333 0.497358765494863 0.0071515048110815 -0.727168278368139 4.19433775008751 P18669 PGAM1 P18669.Y92.p_PGAM1 P18669_Y92y _1_1_92_92 P18669 P18669|Q8N0Y7|P15259 Phosphoglycerate mutase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.11685.11685.3 20.51 14.29 17.588 2 1 1 0 533.2892 1517.884 Y92y TMT10 91 (R) HyGGLTGLNK (A) HY(0.99)GGLT(0.0)GLNK K:TMT10,y:Phosphorylated Y PGAM1 28917.5 2 4 1193.1 167.89 HUMAN 1 -3.0333 21.456 WRMEREDSSEEEEEE-p P55081;S132-p WRMEREDSSEEEEEE 0.633387977519939 0.66880436165464 0.0836666666666667 0.0763333333333334 3.69283504581807 2.39004931326585 0.0836666666666667 0.0763333333333334 0.427283866992063 0.576759914362123 0.857939659581096 0.593473612598221 P55081 MFAP1 P55081.S132.p_MFAP1 P55081_S132sS133s_2_2_132_133 P55081 P55081 Microfibrillar-associated protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.10177.10177.5 14.08 14.08 99 2 2 2 0 666.4749 3168.4072 S132s S133s TMT10 127 (R) MEREDssEEEEEEIDDEEIERRR (G) MEREDS(1.0)S(1.0)EEEEEEIDDEEIERRR s:Phosphorylated S MFAP1 51957.5 6 13 354.1 349.52 HUMAN 1 3.6928 2.39 WRNFQANTKGKKEKK-p O75937;T230-p WRNFQANTKGKKEKK 0.254996768567997 0.00689634574967161 -0.521 0.72 11.2886674428895 30.9948014483038 -0.521 0.72 0.0743247155380718 0.000795279623469143 -2.20676077560646 6.72946259287488 O75937 DNAJC8 O75937.T230.p_DNAJC8 O75937_T230t_1_1_230_230 O75937 O75937 DnaJ homolog subfamily C member 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.21776.21776.3 9.51 5.93 1.173 2 1 1 0 807.4301 2338.3235 N225n N229n T230t TMT10 220 (R) VDSWRnFQAntKGK (K) VDS(0.0)WRN(1.0)FQAN(1.0)T(0.99)KGK K:TMT10,n:Deamidated,t:Phosphorylated T DNAJC8 29841.1 1 4 2647.1 75.23 HUMAN 1 -11.2887 30.9948 WRQRRKQSSSEISLA-p P48634;S456-p WRQRRKQSSSEISLA 0.972247636963192 0.0116239648790344 0.00866666666666666 0.473 0.236858183556511 27.0610723590839 0.00866666666666667 0.473 0.946921945354547 0.00196740043959519 0.0697181952131756 5.57772544313159 P48634 PRRC2A P48634.S456.p_PRRC2A P48634_S456s _1_1_456_456 P48634 P48634|P48634-3|P48634-2|P48634-4 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.13238.13238.2 10.62 10.62 1.103 4 1 1 0 986.5291 1892.0853 S456s TMT10 454 (R) KQsSSEISLAVER (A) KQS(0.99)S(0.0)S(0.0)EIS(0.0)LAVER K:TMT10,s:Phosphorylated S PRRC2A 229315.4 3 8 36.1 882.05 HUMAN 1 0.2369 27.0611 WRRSYNVTPPPIEES-p P07738;T122-p WRRSYNVTPPPIEES 0.45105259442033 0.525423093619392 0.148666666666667 0.0813333333333334 6.3829865722886 3.75434984300121 0.148666666666667 0.0813333333333334 0.229985969748448 0.421274348565117 1.3525144177717 0.869731350703119 P07738 BPGM P07738.T122.p_BPGM P07738_T122t _1_1_122_122 P07738 P07738 Bisphosphoglycerate mutase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17949.17949.4 8.36 8.36 2.651 7 1 1 0 819.8784 3196.5537 T122t TMT10 118 (R) SYNVtPPPIEESHPYYQEIYNDRR (Y) S(0.0)Y(0.0)NVT(0.99)PPPIEES(0.0)HPY(0.0)Y(0.0)QEIY(0.0)NDRR t:Phosphorylated T BPGM 30175.8 1 2 6976.1 8.36 HUMAN 1 6.383 3.7543 WRSQSAFSITGEEAL-p Q8NFW9;S298-p WRSQSAFSITGEEAL 0.668875450269392 0.206319195334453 -0.0733333333333333 0.141 3.26659458005373 9.01798032393339 -0.0733333333333333 0.141 0.471346777226704 0.125372408076671 -0.774059499626877 1.8108226428306 Q8NFW9 MYRIP Q8NFW9.S298.p_MYRIP Q8NFW9_S298s _1_1_298_298 Q8NFW9 Q8NFW9|Q8NFW9-2 Rab effector MyRIP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.21560.21560.3 15.73 16.36 1.666 4 1 1 0 669.3466 1926.0584 S298s TMT10 293 (R) SQSAFsITGEEALK (T) S(0.0)QS(0.0)AFS(0.99)IT(0.0)GEEALK K:TMT10,s:Phosphorylated S MYRIP 96845.6 1 3 2094.1 97.91 HUMAN 1 -3.2666 9.018 WRSSRRISQVSSGET-p Q6ZNJ1;S2739-p WRSSRRISQVSSGET 0.658761777508733 0.832403835403842 0.0626666666666667 -0.0323333333333333 3.40204087188957 1.11551801325264 0.0626666666666667 -0.0323333333333333 0.456873441483774 0.773478415119105 0.800952520201389 -0.302578780758879 Q6ZNJ1 NBEAL2 Q6ZNJ1.S2739.p_NBEAL2 Q6ZNJ1_S2739s _1_1_2739_2739 Q6ZNJ1 Q6ZNJ1|Q6ZNJ1-3|Q6ZNJ1-2 Neurobeachin-like protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11230.11230.3 15.06 15.06 2.427 6 1 1 0 778.3709 2253.1309 S2739s TMT10 2737 (R) RIsQVSSGETEYNPTEAR (-) RIS(0.99)QVS(0.0)S(0.0)GET(0.0)EY(0.0)NPT(0.0)EAR s:Phosphorylated S NBEAL2 305591.9 1 9 1347.1 151.04 HUMAN 1 3.402 -1.1155 WRSVTVDSMDEEKIE-p P29084;S227-p WRSVTVDSMDEEKIE 0.212087105290786 0.381079940373155 -0.241 0.111 13.0038803917618 5.56582304170018 -0.241 0.111 0.0500739626227657 0.277598871209443 -2.5117661719789 1.20654426098035 P29084 GTF2E2 P29084.S227.p_GTF2E2 P29084_S227s _1_1_227_227 P29084 P29084 Transcription initiation factor IIE subunit beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.27368.27368.4 21.47 18.79 3.84 4 1 1 0 696.3588 2702.4413 S227s TMT10 222 (R) SVTVDsMDEEKIEEYLK (R) S(0.0)VT(0.0)VDS(0.99)MDEEKIEEY(0.0)LK K:TMT10,s:Phosphorylated S GTF2E2 33100.1 2 3 3506.1 49.53 HUMAN 1 -13.0039 5.5658 WRVPVRNSPRTRSCV-p Q5JS13-7;S365-p WRVPVRNSPRTRSCV 0.167787448802573 0.965355359265771 0.857 0.0183333333333333 15.4879573691012 0.21923625281566 0.857 0.0183333333333333 0.0282620892210031 0.9507719810389 2.97047883888571 0.064646559052026 Q5JS13 RALGPS1 Q5JS13.7.S365.p_RALGPS1 Q5JS13-7_S365s _1_1_365_365 Q5JS13-7 Q5JS13-7|Q5JS13-2 Isoform 7 of Ras-specific guanine nucleotide-releasing factor RalGPS1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.4851.4851.3 7.69 5.22 99 1 1 1 0 411.8939 1153.7003 S365s TMT10 360 (R) VPVRNsPR (T) VPVRNS(1.0)PR s:Phosphorylated S RALGPS1 60377.8 2 4 3444.1 50.89 HUMAN 1 15.488 0.2192 WSDDDDDSNESKSIV-p Q9UH62;S67-p WSDDDDDSNESKSIV 0.567979516526294 0.0621351095346673 0.089 0.261 4.52209769732352 16.0612379644172 0.089 0.261 0.353012619042518 0.0247671596455551 1.01570319963969 3.07777239039608 Q9UH62 ARMCX3 Q9UH62.S67.p_ARMCX3 Q9UH62_S61sS67s_2_2_61_67 Q9UH62 Q9UH62 Armadillo repeat-containing X-linked protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.15411.15411.3 8.12 8.12 3.283 4 2 2 0 808.6393 2262.9675 S61s S67s N68n TMT10 57 (R) YNDWsDDDDDsnESK (S) Y(0.0)N(0.0)DWS(0.99)DDDDDS(0.99)N(0.99)ES(0.0)K K:TMT10,s:Phosphorylated S,n:Deamidated ARMCX3 42842.2 2 6 2535.1 79.58 HUMAN 1 4.5221 16.0612 WSDDESKSESDLEET-p Q02880;S1342-p WSDDESKSESDLEET 0.546818174340453 0.0176032432582518 0.185 -0.349666666666667 4.83898991744785 24.1689050681067 0.185 -0.349666666666667 0.328171610424696 0.0038292127225803 1.07446787262943 -4.83054950698657 Q02880 TOP2B Q02880.S1342.p_TOP2B Q02880_S1342sS1344s_2_2_1342_1344 Q02880 Q02880|Q02880-2 DNA topoisomerase 2-beta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.23671.24392.3 10.89 10.89 3.447 3 2 2 0 696.9861 1929.0014 S1342s S1344s TMT10 1342 (K) sEsDLEETEPVVIPR (D) S(0.99)ES(0.99)DLEET(0.0)EPVVIPR s:Phosphorylated S TOP2B 184233.7 2 52 71.1 658.36 HUMAN 1 4.839 -24.1689 WSEIRNISFNDKKFV-p P15311;S249-p WSEIRNISFNDKKFV 0.80657666543421 0.168675153833999 -0.035 0.142666666666667 1.79876489593708 10.1674216973043 -0.035 0.142666666666667 0.660881371465755 0.0962183334139008 -0.46376105600268 2.0099847206776 P15311 EZR P15311.S249.p_EZR P15311_S249s _1_1_249_249 P15311 P35241-5|P15311|E7EQR4|P26038 Ezrin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.15500.15500.2 10.63 4.41 99 1 1 1 0 688.3551 1295.736 S249s TMT10 247 (R) NIsFNDK (K) NIS(1.0)FNDK K:TMT10,s:Phosphorylated S EZR 69525.7 2 3 2031.1 101.61 HUMAN 1 -1.7988 10.1674 WSEPRKRSVLPPDGN-p Q8N6S5;S71-p WSEPRKRSVLPPDGN 0.761770448655304 0.186186189492269 0.0443333333333333 -0.144 2.26263563046264 9.60123880182488 0.0443333333333333 -0.144 0.593931606181071 0.109616547619424 0.566209824535466 -1.91176872970481 Q8N6S5 ARL6IP6 Q8N6S5.S71.p_ARL6IP6 Q8N6S5_S71s _1_1_71_71 Q8N6S5 Q8N6S5 ADP-ribosylation factor-like protein 6-interacting protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.14732.14732.3 9.66 9.66 1.199 2 1 1 0 686.3602 1977.0967 S71s Hydrogen 71 (R) sVLPPDGNGSPVLPDKR (N) S(0.99)VLPPDGNGS(0.0)PVLPDKR K:TMT10-Lys-Only,s:Phosphorylated S ARL6IP6 24961.1 2 7 1404.1 146.21 HUMAN 1 2.2626 -9.6012 WSGRSPSSLLIANLH-p Q658Y4;S829-p WSGRSPSSLLIANLH 0.197413033066959 0.492827529954649 -0.234 -0.0646666666666667 13.7369120240629 4.1086347977532 -0.234 -0.0646666666666667 0.0422969252355931 0.388272400018257 -2.64474088213936 -0.937677095857276 Q658Y4 FAM91A1 Q658Y4.S829.p_FAM91A1 Q658Y4_S829s _1_1_829_829 Q658Y4 Q658Y4 Protein FAM91A1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29340.29340.2 10.29 10.29 1.139 3 1 1 0 736.879 1392.7845 S829s Hydrogen 826 (R) SPSsLLIANLHLQ (-) S(0.0)PS(0.0)S(0.99)LLIANLHLQ s:Phosphorylated S FAM91A1 94706.1 9 6 1143.1 172.97 HUMAN 1 -13.7369 -4.1086 WSGSCRRSLLSPKKT-p Q9P0U3;S167-p WSGSCRRSLLSPKKT 0.936180521260949 0.0154294720075962 0.0203333333333333 -0.559666666666667 0.55821793924087 25.0610595447204 0.0203333333333333 -0.559666666666667 0.879383284243703 0.00311812876394719 0.159068672642385 -5.05293114176171 Q9P0U3 SENP1 Q9P0U3.S167.p_SENP1 Q9P0U3_S167sS170s_2_2_167_170 Q9P0U3 Q5FBB7|Q5FBB7-6|Q5FBB7-2|Q5FBB7-3|Q5FBB7-4|Q5FBB7-5|Q9P0U3|Q9P0U3-2 Sentrin-specific protease 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.13901.13901.3 7.34 7.34 99 2 2 2 0 464.2556 1230.8186 S167s S170s Hydrogen 167 (R) sLLsPKK (T) S(1.0)LLS(1.0)PKK K:TMT10-Lys-Only,s:Phosphorylated S SENP1 74049.8 1 11 1420.1 144.33 HUMAN 1 0.5582 -25.0611 WSKGDKLSDPCSSRW-p P30414;S390-p WSKGDKLSDPCSSRW 0.465537186174697 0.159188365613532 -0.179333333333333 -0.159333333333333 6.12706334691047 10.499083950984 -0.179333333333333 -0.159333333333333 0.243945979756074 0.0891438947811262 -1.30716741256384 -2.06768410881583 P30414 NKTR P30414.S390.p_NKTR P30414_S390s _1_1_390_390 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.11565.11565.3 11.87 6.49 2.813 4 1 1 0 797.4101 2310.2479 S390s TMT10 383 (K) WSKGDKLsDPCSSR (W) WS(0.0)KGDKLS(0.99)DPCS(0.0)S(0.0)R K:TMT10,C:Carbamidomethylation,s:Phosphorylated S NKTR 166700.6 4 6 202.1 449.45 HUMAN 1 -6.1271 -10.4991 WSPGQAESPPRSAPP-p Q5T1R4;S2079-p WSPGQAESPPRSAPP 0.76119081695692 0.0223383572236371 0.054 0.316666666666667 2.27408322366781 22.550559123217 0.054 0.316666666666667 0.592368119953742 0.00555832693162954 0.568679152832729 4.44412463327904 Q5T1R4 HIVEP3 Q5T1R4.S2079.p_HIVEP3 Q5T1R4_S2079s _1_1_2079_2079 Q5T1R4 Q5T1R4|Q5T1R4-2 Transcription factor HIVEP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12518.12518.3 14.15 11.83 3.052 3 1 1 0 763.0604 2207.1973 S2079s TMT10 2072 (R) WSPGQAEsPPRSAPPGK (W) WS(0.0)PGQAES(0.99)PPRS(0.0)APPGK K:TMT10,s:Phosphorylated S HIVEP3 261285.6 1 38 465.1 303.46 HUMAN 1 2.2741 22.5506 WSRIRAHSLNTVKQS-p O43572;S173-p WSRIRAHSLNTVKQS 0.0558640413719207 0.0260644608300993 -0.434333333333333 -0.323666666666667 27.3165467330946 21.53984090936 -0.434333333333333 -0.323666666666667 0.00185500603423738 0.00701480994582597 -5.65544217099316 -4.21315281218409 O43572 AKAP10 O43572.S173.p_AKAP10 O43572_S173s _1_1_173_173 O43572 O43572|E7EMD6 A-kinase anchor protein 10, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.7281.7281.3 7.69 7.69 7.688 2 1 1 0 469.9305 1327.8098 S173s TMT10 171 (R) AHsLNTVK (Q) AHS(0.99)LNT(0.0)VK K:TMT10,s:Phosphorylated S AKAP10 74273.3 3 4 1844.1 111.39 HUMAN 1 -27.3165 -21.5398 WSSGVGGSGGGSSGR-p O95071;S139-p WSSGVGGSGGGSSGR 0.688287844973563 0.00960563268644672 -0.0586666666666667 -0.547333333333333 3.04542053111245 28.4469078180318 -0.0586666666666667 -0.547333333333333 0.495972899584816 0.00142991169501103 -0.72962271670077 -5.96434494047488 O95071 UBR5 O95071.S139.p_UBR5 O95071_S139s _1_1_139_139 O95071 O95071|O95071-2|E7EMW7 E3 ubiquitin-protein ligase UBR5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.9225.9225.3 12.04 12.04 3.677 5 1 1 0 535.2414 1523.74 S139s TMT10 132 (R) WSSGVGGsGGGSSGR (S) WS(0.0)S(0.0)GVGGS(0.99)GGGS(0.0)S(0.0)GR s:Phosphorylated S UBR5 312542 1 4 80.1 636.57 HUMAN 1 -3.0454 -28.4469 WSTGYAETLFCPRAR-p S4R3C3;T110-p WSTGYAETLFCPRAR 0.376673189051227 0.288736773296094 -0.203 0.141333333333333 7.84132527671833 7.11738496167342 -0.203 0.141333333333333 0.164387000947456 0.194205490449518 -1.60762221001245 1.48112948737 S4R3C3 NotFound S4R3C3.T110.p_NotFound S4R3C3_T110tS121s_2_2_110_121 S4R3C3 S4R3C3 HCG1997303, isoform CRA_b HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.33055.33055.5 7.9 2.11 1.646 5 2 2 0 708.5515 3378.8258 T110t S121s TMT10 100 (R) RLPWSTGYAEtLFCPRARRAEsPAK (D) RLPWS(0.0)T(0.0)GY(0.0)AET(0.99)LFCPRARRAES(0.99)PAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,s:Phosphorylated S PPM1J 15659.3 1 7 2032.2 101.56 HUMAN 1 -7.8413 7.1174 WSYNGYYSDLSTARH-p P30414;S416-p WSYNGYYSDLSTARH 0.400124584561269 0.0255135823897683 0.123 0.303666666666667 7.34003013049771 21.6785214459617 0.123 0.303666666666667 0.184500261886947 0.00679434906621696 1.52041216883422 4.24439599669532 P30414 NKTR P30414.S416.p_NKTR P30414_S416s _1_1_416_416 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.20492.20492.2 19.57 19.57 4.223 8 1 1 0 1039.9566 1998.9395 S416s TMT10 408 (R) SWSYNGYYsDLSTAR (H) S(0.0)WS(0.0)Y(0.0)NGY(0.0)Y(0.0)S(0.99)DLS(0.0)T(0.0)AR s:Phosphorylated S NKTR 166700.6 7 10 202.1 449.45 HUMAN 1 7.34 21.6785 WTKPSSFSDSER___-p Q8NC56;S499-p WTKPSSFSDSER___ 0.21687479868863 0.0604398804519505 -0.197 -0.224666666666667 12.7876331100754 16.2329148246791 -0.197 -0.224666666666667 0.0526304022117214 0.0238072108068464 -2.47286904301859 -3.1108032061821 Q8NC56 LEMD2 Q8NC56.S499.p_LEMD2 Q8NC56_S499s _1_1_499_499 Q8NC56 Q8NC56|Q8NC56-2 LEM domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14384.14384.3 14.56 11.46 1.876 5 1 1 0 655.6553 1884.9856 S499s TMT10 492 (R) WTKPSSFsDSER (-) WT(0.0)KPS(0.0)S(0.0)FS(0.99)DS(0.0)ER K:TMT10,s:Phosphorylated S LEMD2 57373.5 13 10 664.1 250.64 HUMAN 1 -12.7876 -16.2329 WTKRFKASGVEGADV-p P19367-3;S182-p WTKRFKASGVEGADV 0.0767500903605449 0.419131856691027 0.530333333333333 -0.0836666666666667 23.9155905856098 5.02630239537155 0.530333333333333 -0.0836666666666667 0.00405920459445629 0.314318367704537 4.77426892195648 -1.10865091741664 P19367 HK1 P19367.3.S182.p_HK1 P19367-3_S182s _1_1_182_182 P19367-3 P19367-3|P19367-2|P19367-4 Isoform 3 of Hexokinase-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.17504.17504.3 11.25 11.25 99 1 1 1 0 692.0582 1994.1889 S182s TMT10 179 (R) FKAsGVEGADVVK (L) FKAS(1.0)GVEGADVVK K:TMT10,s:Phosphorylated S HK1 103934.5 1 2 2430.1 83.63 HUMAN 1 23.9156 -5.0263 WTPTARSSPPLPPPA-p I3L2J0;S2153-p WTPTARSSPPLPPPA 0.539805799310612 0.171559548161679 0.0866666666666667 0.150333333333333 4.94573114422088 10.0641024777775 0.0866666666666667 0.150333333333333 0.32020409786756 0.0985348255932138 1.09410359295195 1.99203810260918 I3L2J0 NotFound I3L2J0.S2153.p_NotFound I3L2J0_S2153s _1_1_2153_2153 I3L2J0 I3L2J0|Q96RK0|A0A0A0MQR4 Protein capicua homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11997.12365.2 10.87 4.73 1.424 2 1 1 0 793.3942 1505.8161 S2153s TMT10 2152 (R) SsPPLPPPAEER (T) S(0.0)S(0.99)PPLPPPAEER s:Phosphorylated S CIC 259056.7 6 36 23.1 999.57 HUMAN 1 4.9457 10.0641 WTRSRRKTGTLQPWN-p Q9H0H5;T249-p WTRSRRKTGTLQPWN 0.469306532717932 0.525230919094125 0.127 0.065 6.06556700833714 3.75706582121545 0.127 0.0650000000000001 0.247424840609862 0.421010975599149 1.29623539538745 0.870257093312828 Q9H0H5 RACGAP1 Q9H0H5.T249.p_RACGAP1 Q9H0H5_T249t _1_1_249_249 Q9H0H5 Q9H0H5 Rac GTPase-activating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12104.12104.3 8.87 8.87 1.567 6 1 1 0 867.1193 2519.3731 T249t TMT10 247 (R) RKtGTLQPWNSDSTLNSR (Q) RKT(0.99)GT(0.0)LQPWNS(0.0)DS(0.0)T(0.0)LNS(0.0)R K:TMT10,t:Phosphorylated T RACGAP1 71709.9 2 7 574.1 268.64 HUMAN 1 6.0656 3.7571 WTVEQLRSEQLPKKD-p Q00688;S17-p WTVEQLRSEQLPKKD 0.708687737747041 0.00817736014367236 0.0746666666666667 0.48 2.81063243917096 29.7146258390208 0.0746666666666667 0.48 0.523524193085187 0.00106791679361164 0.681679972459615 6.33584839331314 Q00688 FKBP3 Q00688.S17.p_FKBP3 Q00688_S17s _1_1_17_17 Q00688 Q00688 Peptidyl-prolyl cis-trans isomerase FKBP3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18613.18613.4 17.31 17.31 5.192 2 1 1 0 645.8694 2500.4855 S17s TMT10 9 (R) AWTVEQLRsEQLPKK (D) AWT(0.0)VEQLRS(0.99)EQLPKK K:TMT10,s:Phosphorylated S FKBP3 25233.4 1 1 1207.1 166.76 HUMAN 1 2.8106 29.7146 WTVKHRYSDFHDLHE-p Q9Y2I1;S51-p WTVKHRYSDFHDLHE 0.807399255272832 0.485776703848126 -0.0586666666666667 0.146333333333333 1.78654436279658 4.18872476950107 -0.0586666666666667 0.146333333333333 0.662743632353912 0.381177733199734 -0.460994112372164 0.952869909089261 Q9Y2I1 NISCH Q9Y2I1.S51.p_NISCH Q9Y2I1_S51s _1_1_51_51 Q9Y2I1 Q9Y2I1|Q9Y2I1-3|C9J715|Q9Y2I1-4 Nischarin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6215.6215.5 15.63 15.63 15.629 2 1 1 0 425.2111 2042.0608 S51s TMT10 48 (K) HRYsDFHDLHEK (L) HRY(0.0)S(0.99)DFHDLHEK K:TMT10,s:Phosphorylated S NISCH 168394.3 1 2 2683.1 74.06 HUMAN 1 -1.7865 4.1887 WVAASSKSPRVARRA-p Q8IXZ2;S320-p WVAASSKSPRVARRA 0.84304508984975 0.00184260569775099 -0.0313333333333333 -0.837333333333333 1.43458823682075 43.0191703812822 -0.0313333333333334 -0.837333333333333 0.718689295502419 4.98979796854913e-05 -0.379598036306228 -11.5763914771861 Q8IXZ2 ZC3H3 Q8IXZ2.S320.p_ZC3H3 Q8IXZ2_S320s _1_1_320_320 Q8IXZ2 Q8IXZ2 Zinc finger CCCH domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.10399.10399.3 9.66 9.66 1.17 3 1 1 0 542.9641 1546.9106 S320s TMT10 313 (K) WVAASSKsPR (V) WVAAS(0.0)S(0.0)KS(0.99)PR K:TMT10,s:Phosphorylated S ZC3H3 103422.9 1 2 2382.1 85.66 HUMAN 1 -1.4346 -43.0192 WVDEERASLLKSQEP-p E5RJU9;S355-p WVDEERASLLKSQEP 0.132087959934017 0.613064694985 0.26 -0.07 18.1464600987806 2.8878194974324 0.26 -0.07 0.0153233594814865 0.51430180704597 3.49196682875522 -0.697437786831428 E5RJU9 NotFound E5RJU9.S355.p_NotFound E5RJU9_S355s _1_1_355_355 E5RJU9 E5RJU9 Protein LYRIC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36414.36414.4 17.08 17.08 3.458 6 1 1 0 1176.0608 4621.2523 S355s TMT10 321 (R) SIFSGIDGLSSADPNSDWNAPAEEWGNWVDEERAsLLK (S) S(0.0)IFS(0.0)GIDGLS(0.0)S(0.0)ADPNS(0.0)DWNAPAEEWGNWVDEERAS(0.99)LLK K:TMT10,s:Phosphorylated S MTDH 57577.3 1 1 77.2 644.48 HUMAN 1 18.1465 -2.8878 WVERATPT_______-p Q9BTY7;T390-p WVERATPT_______ 0.75391804132729 0.174922527973995 0.056 0.174666666666667 2.34373323440608 9.95719566013409 0.056 0.174666666666667 0.582943785117497 0.100990479444972 0.583646911331197 1.97348060985814 Q9BTY7 HGH1 Q9BTY7.T390.p_HGH1 Q9BTY7_T390t _1_1_390_390 Q9BTY7 Q9BTY7 Protein HGH1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.21325.21325.2 14.07 12.42 1.322 2 1 1 0 952.9717 1824.9693 T390t TMT10 377 (R) ELAPEPWVERATPt (-) ELAPEPWVERAT(0.0)PT(0.99) t:Phosphorylated T HGH1 42584.9 2 3 3877.1 41.47 HUMAN 1 2.3437 9.9572 WVGEFSLSVGPQREA-p Q9C0C2;S1093-p WVGEFSLSVGPQREA 0.836584291887962 0.0197693906334088 0.0513333333333333 -0.336666666666667 1.49630439345156 23.3826390454663 0.0513333333333333 -0.336666666666667 0.708548463593858 0.00458919060107179 0.394121587770817 -4.64016091026632 Q9C0C2 TNKS1BP1 Q9C0C2.S1093.p_TNKS1BP1 Q9C0C2_S1093s _1_1_1093_1093 Q9C0C2 Q9C0C2|Q9C0C2-2 182 kDa tankyrase-1-binding protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.27502.27502.3 18.09 18.09 2.755 2 1 1 0 609.9722 1747.9329 S1093s TMT10 1085 (R) GWVGEFSLsVGPQR (E) GWVGEFS(0.0)LS(0.99)VGPQR s:Phosphorylated S TNKS1BP1 182819.3 5 46 4.1 2105.7 HUMAN 1 1.4963 -23.3826 WVPGLKESAEEMVKN-p Q9H501;S614-p WVPGLKESAEEMVKN 0.2781563063133 0.0727112126621179 0.163666666666667 0.209333333333333 10.5136603862025 15.1284981250272 0.163666666666667 0.209333333333333 0.0888451983713754 0.0307008349955237 2.07110952774789 2.90067329376815 Q9H501 ESF1 Q9H501.S614.p_ESF1 Q9H501_S614s _1_1_614_614 Q9H501 Q9H501|A0A087WX71 ESF1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.24175.24175.3 11.41 7.41 99 1 1 1 0 790.7587 2290.3084 S614s TMT10 607 (K) WVPGLKEsAEEMVK (N) WVPGLKES(1.0)AEEMVK K:TMT10,s:Phosphorylated S ESF1 99193.8 1 7 500.1 291.39 HUMAN 1 10.5137 15.1285 WWEKALYSPLFPASE-p Q92628;S1294-p WWEKALYSPLFPASE 0.766023104823569 0.400250923729947 -0.0426666666666667 0.0846666666666667 2.22139221017743 5.28963794203388 -0.0426666666666667 0.0846666666666667 0.599598833100945 0.295825907724201 -0.557291279143326 1.15663535654179 Q92628 KIAA0232 Q92628.S1294.p_KIAA0232 Q92628_S1294s _1_1_1294_1294 Q92628 Q92628 Uncharacterized protein KIAA0232 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.23694.23694.5 26.48 23.76 3.886 9 1 1 0 1067.9004 5255.4916 S1294s TMT10 1291 (K) ALYsPLFPASECEECYTNAKGESGLEEYPDAKETPSNEER (L) ALY(0.0)S(0.99)PLFPAS(0.0)ECEECY(0.0)T(0.0)NAKGES(0.0)GLEEY(0.0)PDAKET(0.0)PS(0.0)NEER C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KIAA0232 157125.3 6 13 568.1 270.65 HUMAN 1 -2.2214 5.2896 WWQARQVTPDGESDE-p Q12959-2;T630-p WWQARQVTPDGESDE 0.933081930768236 0.204052053543866 0.013 0.163666666666667 0.590351924963533 9.08161583743205 0.013 0.163666666666667 0.87290063113896 0.123548767198373 0.167710792707163 1.82183017791985 Q12959 DLG1 Q12959.2.T630.p_DLG1 Q12959-2_T630t _1_1_630_630 Q12959-2 Q12959-2|Q12959-7|Q12959-4|A0A0C4DFT3|Q12959-6|Q12959-3|Q12959-5|Q12959-9|Q12959-8|E7EQD7 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.18437.18437.3 19.04 14.56 6.441 3 1 1 0 765.7235 2215.1858 T630t TMT10 628 (R) QVtPDGESDEVGVIPSK (R) QVT(0.99)PDGES(0.0)DEVGVIPS(0.0)K K:TMT10,t:Phosphorylated T DLG1 103604.4 2 20 196.1 460.79 HUMAN 1 0.5904 9.0816 WWSRLVSSDPEINTK-p Q9Y266;S260-p WWSRLVSSDPEINTK 0.380956228292324 0.269691746661734 0.149333333333333 -0.127333333333333 7.7444511797106 7.49345849609748 0.149333333333333 -0.127333333333333 0.168095033489173 0.178095993841957 1.59079594988358 -1.54668560813228 Q9Y266 NUDC Q9Y266.S260.p_NUDC Q9Y266_S260s _1_1_260_260 Q9Y266 Q9Y266 Nuclear migration protein nudC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.16793.16793.2 13.2 13.2 1.111 3 1 1 0 870.9653 1660.9522 S260s TMT10 257 (R) LVSsDPEINTK (K) LVS(0.0)S(0.99)DPEINT(0.0)K K:TMT10,s:Phosphorylated S NUDC 38299.3 4 6 739.1 234.62 HUMAN 1 7.7445 -7.4935 WYIADIFTDESEDDR-p Q6UB99;T1120-p WYIADIFTDESEDDR 0.90552186362789 0.815228196964363 -0.0193333333333333 -0.029 0.848069135186866 1.24145419938551 -0.0193333333333333 -0.029 0.822608298706108 0.751371261399338 -0.235321610350307 -0.333360216746766 Q6UB99 ANKRD11 Q6UB99.T1120.p_ANKRD11 Q6UB99_T1120t _1_1_1120_1120 Q6UB99 Q6UB99 Ankyrin repeat domain-containing protein 11 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31457.31457.4 13.26 13.26 2.631 6 1 1 0 868.1343 3389.5342 T1120t TMT10 1112 (K) SWYIADIFtDESEDDRDSCMGSGFK (M) S(0.0)WY(0.0)IADIFT(0.99)DES(0.0)EDDRDS(0.0)CMGS(0.0)GFK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ANKRD11 299790.8 2 14 340.1 353.72 HUMAN 1 -0.8481 -1.2415 WYKGFNHSPNPSKHQ-p O14628-7;S326-p WYKGFNHSPNPSKHQ 0.861031727136746 0.908696407990322 -0.0353333333333333 -0.012 1.26914727078975 0.582727069108452 -0.0353333333333333 -0.012 0.746595336637629 0.874434518371976 -0.340092220277353 -0.165649089396102 O14628 ZNF195 O14628.7.S326.p_ZNF195 O14628-7_S326s _1_1_326_326 O14628-7 O14628|O14628-6|O14628-5|O14628-7|O14628-4 Isoform 7 of Zinc finger protein 195 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.7065.7065.3 11.24 10.06 10.057 2 1 1 0 541.6088 1542.8429 S326s TMT10 322 (K) GFNHsPNPSK (H) GFNHS(0.99)PNPS(0.0)K K:TMT10,s:Phosphorylated S ZNF195 67095.4 1 17 240.38 415.72 HUMAN 1 -1.2691 -0.5827 WYLKEIESEIDSEEE-p Q14566;S758-p WYLKEIESEIDSEEE 0.287132448838618 0.0519260893065422 -0.211333333333333 0.284333333333333 10.2192537568404 17.1440136707525 -0.211333333333333 0.284333333333333 0.095076814900708 0.0193018365177925 -2.01982939204978 3.28852115434792 Q14566 MCM6 Q14566.S758.p_MCM6 Q14566_S758s _1_1_758_758 Q14566 Q14566 DNA replication licensing factor MCM6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26596.26596.3 15.69 13.22 3.357 2 1 1 0 772.3819 2235.1644 S758s TMT10 755 (K) EIEsEIDSEEELINK (K) EIES(0.99)EIDS(0.0)EEELINK K:TMT10,s:Phosphorylated S MCM6 93857.5 2 7 1039.1 185.36 HUMAN 1 -10.2193 17.144 WYSEDEDTDTEEYKN-p B7WPL0;T473-p WYSEDEDTDTEEYKN 0.335910107006317 0.0521694283248614 -0.237 0.232 8.83801684267775 17.1142148115792 -0.237 0.232 0.130676747270392 0.019434730328301 -1.78032322958515 3.28264196399604 B7WPL0 RIC8B B7WPL0.T473.p_RIC8B B7WPL0_S468sT473t_2_2_468_473 B7WPL0 Q9NVN3|Q9NVN3-3|Q9NVN3-4|B7WPL0|Q9NVN3-1 Synembryn-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19525.19525.3 15.5 15.5 1.183 5 2 2 0 905.3542 2554.1146 S468s T473t TMT10 463 (R) GDNWYsEDEDtDTEEYK (N) GDNWY(0.0)S(0.99)EDEDT(0.99)DT(0.0)EEY(0.0)K K:TMT10,s:Phosphorylated S,t:Phosphorylated T RIC8B 64291.7 6 4 2890.1 66.71 HUMAN 1 -8.838 17.1142 YAADRNHYRRYPRRR-p P67809;Y145-p YAADRNHYRRYPRRR 0.838274783466982 0.563046529262558 0.0736666666666666 -0.2 1.48234939647745 3.3614425033786 0.0736666666666667 -0.2 0.710828873572339 0.461164373982122 0.390847382187849 -0.792796854735595 P67809 YBX1 P67809.Y145.p_YBX1 P67809_Y145y _1_1_145_145 P67809 P67809 Nuclease-sensitive element-binding protein 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.4077.4077.3 14.42 14.42 14.421 2 1 1 0 492.231 1394.7127 Y145y TMT10 138 (K) YAADRNHyR (R) Y(0.0)AADRNHY(0.99)R y:Phosphorylated Y YBX1 35923.5 2 1 120.1 25.57 HUMAN 1 1.4823 -3.3614 YAAFQEDSSGDEAES-p Q15311;S92-p YAAFQEDSSGDEAES 0.711237004524916 0.966502502242138 0.0508333333333333 -0.00466666666666667 2.78136037214521 0.210409897321906 0.0508333333333333 -0.00466666666666668 0.527064739247014 0.952706241129772 0.675643157261682 -0.062102527009259 Q15311 RALBP1 Q15311.S92.p_RALBP1 Q15311_S92sS93s_2_2_92_93 Q15311 Q15311|A0A1W2PRI7 RalA-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17788.17788.3 20.36 20.36 5.426 6 2 2 0 941.7276 2663.2361 S92s S93s TMT10 82 (R) TEGYAAFQEDssGDEAESPSK (M) T(0.0)EGY(0.0)AAFQEDS(0.99)S(0.99)GDEAES(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S RALBP1 76461.4 9 11 822.1 218.43 HUMAN 2 2.7814 -0.2104 YADSPGASSPEQPKR-p P32519;S167-p YADSPGASSPEQPKR 0.465533819815265 0.0271669948321718 0.117 0.317 6.1278202637765 21.2453323603549 0.117 0.317 0.243903466957874 0.00750700601705472 1.30730187791465 4.14726361528591 P32519 ELF1 P32519.S167.p_ELF1 P32519_S167sS168s_2_2_167_168 P32519 P32519|P32519-2 ETS-related transcription factor Elf-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.11420.11420.3 9.03 9.03 4.013 4 2 2 0 684.643 1891.9802 S167s S168s TMT10 160 (K) YADSPGAssPEQPK (R) Y(0.0)ADS(0.0)PGAS(0.99)S(0.99)PEQPK K:TMT10,s:Phosphorylated S ELF1 67725 3 8 1950.1 105.53 HUMAN 2 6.1278 21.2453 YAFGSNVTPQPYLKN-p Q96BN2;T213-p YAFGSNVTPQPYLKN 0.569246194913171 0.380633588423462 -0.0843333333333333 -0.095 4.50196294660522 5.57612630558244 -0.0843333333333334 -0.0949999999999999 0.354653055084431 0.276941072304606 -1.01194409450917 -1.2083985417878 Q96BN2 TADA1 Q96BN2.T213.p_TADA1 Q96BN2_T213t _1_1_213_213 Q96BN2 Q96BN2 Transcriptional adapter 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23266.23266.3 16.16 10.54 3.828 4 1 1 0 708.3717 2043.1315 T213t TMT10 206 (K) YAFGSNVtPQPYLK (N) Y(0.0)AFGS(0.0)NVT(0.99)PQPY(0.0)LK K:TMT10,t:Phosphorylated T TADA1 37666.2 2 3 4164.1 36.41 HUMAN 1 -4.502 -5.5761 YAFIEFASFEDAKEA-p P19338;S532-p YAFIEFASFEDAKEA 0.319825102614354 0.35232300272229 -0.168333333333333 0.111 9.2695447854709 6.0062084339158 -0.168333333333333 0.111 0.118316556511328 0.250829814289825 -1.85503293014706 1.28536342604079 P19338 NCL P19338.S532.p_NCL P19338_S532s _1_1_532_532 P19338 P19338 Nucleolin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.31423.31423.3 15.13 15.13 15.133 2 1 1 0 711.6828 2053.0683 S532s TMT10 524 (K) GYAFIEFAsFEDAK (E) GY(0.0)AFIEFAS(0.99)FEDAK K:TMT10,s:Phosphorylated S NCL 76670.1 2 17 114.1 570.88 HUMAN 1 -9.2695 6.0062 YAGALRASGEMASAQ-p P54578;S143-p YAGALRASGEMASAQ 0.123401035738524 0.614876406667893 -0.334333333333333 0.0503333333333334 18.9031838916342 2.8697081686184 -0.334333333333333 0.0503333333333334 0.0128730545868421 0.516451071892621 -3.64741518564671 0.693727027178431 P54578 USP14 P54578.S143.p_USP14 P54578_S143s_1_1_143_143 P54578 P54578|P54578-3|P54578-2|A6NJA2 Ubiquitin carboxyl-terminal hydrolase 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36642.36642.4 24.51 20.1 2.22 6 1 1 0 887.6736 3451.7187 S143s M146m Hydrogen 136 (R) YAGALRAsGEmASAQYITAALRDLFDSMDK (T) Y(0.0)AGALRAS(0.99)GEM(0.99)AS(0.0)AQY(0.0)IT(0.0)AALRDLFDS(0.0)M(0.0)DK K:TMT10-Lys-Only,s:Phosphorylated S,m:Oxidized methionine USP14 56524.5 37 1 916.1 200.75 HUMAN 1 -18.9032 2.8697 YAGGRPPSYAGSPVH-p A0A087X165;S373-p YAGGRPPSYAGSPVH 0.339066943339456 0.17459998891911 -0.221666666666667 -0.151 8.73971083771162 9.96889246416423 -0.221666666666667 -0.151 0.133668451281541 0.100718848885909 -1.76330651698964 -1.97551042873241 A0A087X165 NotFound A0A087X165.S373.p_NotFound A0A087X165_S373sS377s_2_2_373_377 A0A087X165 A0A087X165 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10077.10077.4 11.14 11.14 1.311 5 2 2 0 668.0615 2509.2898 S373s S377s TMT10 364 (R) LSYAGGRPPsYAGsPVHHAAER (L) LS(0.0)Y(0.0)AGGRPPS(0.99)Y(0.0)AGS(0.99)PVHHAAER s:Phosphorylated S SRCIN1 130745.5 1 35 98.1 603.22 HUMAN 1 -8.7397 -9.9689 YAGSKWDSESNSERD-p P30414;S887-p YAGSKWDSESNSERD 0.880959558381171 0.0940306432368947 -0.0253333333333333 0.185333333333333 1.08209948382954 13.5787018176547 -0.0253333333333333 0.185333333333333 0.77945321302673 0.0438661801882388 -0.29434730091196 2.61437607635883 P30414 NKTR P30414.S887.p_NKTR P30414_S887s _1_1_887_887 P30414 P30414|A0A087WYW3 NK-tumor recognition protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.10953.10953.5 15.91 15.91 1.679 6 1 1 0 588.8918 2860.468 S887s TMT10 879 (K) NYAGSKWDsESNSERDVTK (N) NY(0.0)AGS(0.0)KWDS(0.99)ES(0.0)NS(0.0)ERDVT(0.0)K K:TMT10,s:Phosphorylated S NKTR 166700.6 7 17 202.1 449.45 HUMAN 1 -1.0821 13.5787 YAKVPLFSPNFSEKV-p Q9BQ52;S736-p YAKVPLFSPNFSEKV 0.148266672319898 0.0505873315186917 -0.359666666666667 -0.356333333333333 16.7587348229981 17.3142234492544 -0.359666666666667 -0.356333333333333 0.021092425202688 0.0185599864608925 -3.21526540399716 -3.32219213639712 Q9BQ52 ELAC2 Q9BQ52.S736.p_ELAC2 Q9BQ52_S736s _1_1_736_736 Q9BQ52 Q9BQ52|G5E9D5 Zinc phosphodiesterase ELAC protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28508.28508.3 11.52 11.52 4.38 2 1 1 0 601.6541 1722.9831 S736s TMT10 732 (K) VPLFsPNFSEK (V) VPLFS(0.99)PNFS(0.0)EK K:TMT10,s:Phosphorylated S ELAC2 93472.6 1 3 3791.1 43.02 HUMAN 1 -16.7587 -17.3142 YAKYLPHSAGRYAAK-p M0R0R2;S73-p YAKYLPHSAGRYAAK 0.829037105999495 0.08186434174775 -0.0333333333333333 -0.246666666666667 1.56520717297184 14.4074011441351 -0.0333333333333333 -0.246666666666667 0.69739572798293 0.0362459832641522 -0.410205847550183 -2.76631158176211 M0R0R2 NotFound M0R0R2.S73.p_NotFound M0R0R2_S73s _1_1_73_73 M0R0R2 M0R0R2|P46782 40S ribosomal protein S5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.6429.6429.2 12.43 6.24 10.31 2 1 1 0 605.3006 1129.6316 S73s TMT10 69 (K) YLPHsAGR (Y) Y(0.0)LPHS(0.99)AGR s:Phosphorylated S RPS5 25504 2 2 2365.1 86.45 HUMAN 1 -1.5652 -14.4074 YALVKAKSVDEIAKI-p A6ND36;S356-p YALVKAKSVDEIAKI 0.146674740935683 0.00990642974702151 -0.373 -0.469666666666667 16.9371527607208 28.1849891187378 -0.373 -0.469666666666667 0.0202434590707537 0.00151880174738971 -3.25026672233189 -5.88975421178025 A6ND36 FAM83G A6ND36.S356.p_FAM83G A6ND36_S356s _1_1_356_356 A6ND36 A6ND36|A6ND36-2 Protein FAM83G HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12051.12051.2 13.07 5.69 99 1 1 1 0 864.4981 1648.0248 S356s TMT10 354 (K) AKsVDEIAK (I) AKS(1.0)VDEIAK K:TMT10,s:Phosphorylated S FAM83G 91118.6 5 3 1966.1 104.97 HUMAN 1 -16.9372 -28.185 YARPHVMSPGNRNHP-p P54259;S896-p YARPHVMSPGNRNHP 0.333463124692512 0.236824785608524 0.171666666666667 -0.121333333333333 8.90100535861077 8.23979503977367 0.171666666666667 -0.121333333333333 0.128795136625994 0.149975561305294 1.79122643889612 -1.67618686419744 P54259 ATN1 P54259.S896.p_ATN1 P54259_S896s _1_1_896_896 P54259 P54259 Atrophin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11397.11423.3 15.26 12.14 7.771 4 1 1 0 708.6809 2044.0596 S896s TMT10 885 (R) TLSEYARPHVMsPGNR (N) T(0.0)LS(0.0)EY(0.0)ARPHVMS(0.99)PGNR s:Phosphorylated S ATN1 125583.1 3 9 869.1 209.92 HUMAN 1 8.901 -8.2398 YARPHVMSPTNRNHP-p Q9P2R6;S1266-p YARPHVMSPTNRNHP 0.966490451651987 0.791272961181784 -0.00700000000000001 0.0426666666666667 0.286582779895741 1.41529198423885 -0.00700000000000001 0.0426666666666666 0.936141982138289 0.721889627326441 -0.0839137838976959 0.374994532361347 Q9P2R6 RERE Q9P2R6.S1266.p_RERE Q9P2R6_S1266s _1_1_1266_1266 Q9P2R6 Q9P2R6|B1AKN3|Q9P2R6-2 Arginine-glutamic acid dipeptide repeats protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11558.11558.4 17.62 17.62 2.357 5 1 1 0 542.7692 2088.0858 S1266s TMT10 1255 (R) TLSEYARPHVMsPTNR (N) T(0.0)LS(0.0)EY(0.0)ARPHVMS(0.99)PT(0.0)NR s:Phosphorylated S RERE 173561.6 6 10 278.1 389.04 HUMAN 1 -0.2866 1.4153 YASGSSASLGGPESA-p Q15149;S4675-p YASGSSASLGGPESA 0.242949302169664 0.711295892409157 0.185333333333333 0.041 11.7546719476915 2.03477707191041 0.185333333333333 0.0410000000000001 0.0667625329364374 0.625924992508703 2.28889433668057 0.516429626320441 Q15149 PLEC Q15149.S4675.p_PLEC Q15149_S4675s _1_1_4675_4675 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17027.17027.2 13.09 13.09 2.411 6 1 1 0 910.4194 1739.8649 S4675s TMT10 4668 (R) YASGSSAsLGGPESAVA (-) Y(0.0)AS(0.0)GS(0.0)S(0.0)AS(0.99)LGGPES(0.0)AVA s:Phosphorylated S PLEC 533778 1 45 44.1 794.85 HUMAN 1 11.7547 2.0348 YAVKRSMSPFRGPKD-p Q99640;S143-p YAVKRSMSPFRGPKD 0.125743941781331 0.00394863627571416 -0.323333333333333 -0.783 18.7263556460657 35.439889843924 -0.323333333333333 -0.783 0.0134080134022256 0.000285766302528899 -3.61078667768239 -8.25757017083893 Q99640 PKMYT1 Q99640.S143.p_PKMYT1 Q99640_S143s _1_1_143_143 Q99640 B4DZM6|Q99640|Q99640-3|Q99640-2|A6NHV6|Q99640-4 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12362.12362.2 10.67 10.67 2.126 2 1 1 0 772.9063 1464.8397 S143s TMT10 141 (R) SMsPFRGPK (D) S(0.0)MS(0.99)PFRGPK K:TMT10,s:Phosphorylated S PKMYT1 55090.9 15 7 926.1 199.78 HUMAN 1 -18.7264 -35.4399 YAVTEEESDEEGSQE-p Q9ULR0-1;S222-p YAVTEEESDEEGSQE 0.278066029924807 0.0243142668422904 -0.290666666666667 0.308333333333333 10.519202326762 21.9920534342672 -0.290666666666667 0.308333333333333 0.088731897187986 0.00632112904633227 -2.072075991676 4.31555093255557 Q9ULR0 ISY1 Q9ULR0.1.S222.p_ISY1 Q9ULR0-1_T218tS222s_2_2_218_222 Q9ULR0-1 Q9ULR0-1|Q9ULR0-2 Isoform 2 of Pre-mRNA-splicing factor ISY1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18654.18654.4 11.51 11.51 1.166 4 2 2 0 1066.9469 4103.8352 N213n T218t S222s Hydrogen 200 (R) GEKEEEEEEEEEInIYAVtEEEsDEEGSQEK (G) GEKEEEEEEEEEIN(1.0)IY(0.0)AVT(0.99)EEES(0.99)DEEGS(0.0)QEK K:TMT10-Lys-Only,n:Deamidated,t:Phosphorylated T,s:Phosphorylated S ISY1 37794.1 1 2 4736.1 27.28 HUMAN 1 -10.5192 21.9921 YCEEHARSDPLLIGI-p Q9UBI6;S49-p YCEEHARSDPLLIGI 0.862056719598785 0.0696447276654229 -0.0253333333333333 0.218333333333333 1.25918950785505 15.3884748071136 -0.0253333333333334 0.218333333333333 0.748309138962644 0.028916952345829 -0.337686675796974 2.94964624418992 Q9UBI6 GNG12 Q9UBI6.S49.p_GNG12 Q9UBI6_S49s _1_1_49_49 Q9UBI6 Q9UBI6 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.32190.32190.3 14.81 11.46 5.535 3 1 1 0 679.6873 1957.0844 S49s Hydrogen 49 (R) sDPLLIGIPTSENPFK (D) S(0.99)DPLLIGIPT(0.0)S(0.0)ENPFK K:TMT10-Lys-Only,s:Phosphorylated S GNG12 8120.2 7 2 3339.1 53.43 HUMAN 1 -1.2592 15.3885 YCEHLSDSQEDITWR-p F8VU39;S1557-p YCEHLSDSQEDITWR 0.950675100006827 0.952360364260666 0.0106666666666667 -0.00766666666666665 0.433207579615487 0.301094776305999 0.0106666666666667 -0.00766666666666667 0.905063898679103 0.933019074246133 0.124963261424467 -0.0880216807700172 F8VU39 BAZ2A F8VU39.S1557.p_BAZ2A F8VU39_S1557s _1_1_1557_1557 F8VU39 F8VU39|Q9UIF9-3|Q9UIF9-2|J3KPG5 Bromodomain adjacent to zinc finger domain protein 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20248.20248.4 18.04 14.4 1.127 8 1 1 0 980.9246 3840.7067 S1557s TMT10 1535 (R) GWTCPSPDSTREDLAYCEHLSDsQEDITWR (G) GWT(0.0)CPS(0.0)PDS(0.0)T(0.0)REDLAY(0.0)CEHLS(0.0)DS(0.99)QEDIT(0.0)WR C:Carbamidomethylation,s:Phosphorylated S BAZ2A 212873.4 1 13 471.1 302.34 HUMAN 1 0.4332 -0.3011 YCGVHRYSDVHNCSY-p Q6FIF0;S176-p YCGVHRYSDVHNCSY 0.144022894602826 0.0658466153095601 -0.547333333333333 -0.264666666666667 17.1815946156899 15.7204104853239 -0.547333333333334 -0.264666666666667 0.0191355318935929 0.0267891510785409 -3.29848742234471 -3.0126056198496 Q6FIF0 ZFAND6 Q6FIF0.S176.p_ZFAND6 Q6FIF0_S176s _1_1_176_176 Q6FIF0 Q6FIF0|Q6FIF0-2 AN1-type zinc finger protein 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.9672.9672.4 18.42 9.64 4.73 6 1 1 0 823.3664 3210.4708 S176s TMT10 165 (R) CGNVYCGVHRYsDVHNCSYNYK (A) CGNVY(0.0)CGVHRY(0.0)S(0.99)DVHNCS(0.0)Y(0.0)NY(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZFAND6 23182.3 1 2 3928.1 40.56 HUMAN 1 -17.1816 -15.7204 YCMVVPESPTSDYAE-p Q9Y4D2;S941-p YCMVVPESPTSDYAE 0.99316502836986 0.0396547509555374 0.00200000000000001 0.252333333333333 0.0620846612047957 18.7983934003455 0.00199999999999999 0.252333333333333 0.985806174253785 0.0131874449575804 0.0186270376657762 3.62255306579488 Q9Y4D2 DAGLA Q9Y4D2.S941.p_DAGLA Q9Y4D2_S941s _1_1_941_941 Q9Y4D2 Q9Y4D2 Sn1-specific diacylglycerol lipase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.30901.30901.3 24.35 25.69 2.097 8 1 1 0 1111.5081 3252.5481 S941s TMT10 927 (K) SSSFQDLYCMVVPEsPTSDYAEGPK (S) S(0.0)S(0.0)S(0.0)FQDLY(0.0)CMVVPES(0.99)PT(0.0)S(0.0)DY(0.0)AEGPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S DAGLA 116490.4 3 7 1490.1 137.27 HUMAN 1 0.0621 18.7984 YCNQARGSPARVNSN-p Q7Z5J4;S538-p YCNQARGSPARVNSN 0.676492954068529 0.610563273669643 0.0763333333333333 0.08 3.17948503308712 2.9113967131312 0.0763333333333333 0.0800000000000001 0.480896367602948 0.511517302519605 0.756637813784896 0.702260885034356 Q7Z5J4 RAI1 Q7Z5J4.S538.p_RAI1 Q7Z5J4_S538s _1_1_538_538 Q7Z5J4 Q7Z5J4|Q7Z5J4-2|A0A1W2PQJ7|Q7Z5J4-3 Retinoic acid-induced protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.11519.11519.4 14.74 9.51 2.439 5 1 1 0 699.3521 2714.4197 S538s TMT10 528 (R) SFLYCNQARGsPARVNSNSK (A) S(0.0)FLY(0.0)CNQARGS(0.99)PARVNS(0.0)NS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S RAI1 206315.3 5 2 142.1 522.21 HUMAN 1 3.1795 2.9114 YCPDLELSDSEAESD-p Q92613;S774-p YCPDLELSDSEAESD 0.826605132693876 0.0430130777460993 0.0473333333333333 0.259333333333333 1.59564827398906 18.3078652608473 0.0473333333333333 0.259333333333333 0.692524548165224 0.0147643208310719 0.417269145151361 3.52189577260154 Q92613 JADE3 Q92613.S774.p_JADE3 Q92613_S774s _1_1_774_774 Q92613 Q92613 Protein Jade-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.20099.20099.3 26.16 26.16 1.309 5 1 1 0 1147.8311 3361.5054 S774s TMT10 759 (R) APYQENDGYCPDLELsDSEAESDGNK (E) APY(0.0)QENDGY(0.0)CPDLELS(0.99)DS(0.0)EAES(0.0)DGNK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S JADE3 95461.1 9 8 1439.1 142.43 HUMAN 1 1.5956 18.3079 YCSLRFFSPELKQEH-p Q9ULJ3;S759-p YCSLRFFSPELKQEH 0.0688208313501699 0.277981764400795 -0.469 -0.201 25.060421210089 7.32582159824657 -0.469 -0.201 0.00311858710637213 0.185104867971344 -5.05909590716617 -1.5174956191223 Q9ULJ3 ZBTB21 Q9ULJ3.S759.p_ZBTB21 Q9ULJ3_S759s _1_1_759_759 Q9ULJ3 Q9ULJ3|Q9ULJ3-2 Zinc finger and BTB domain-containing protein 21 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26101.26101.2 7.82 2.76 99 1 1 1 0 703.3807 1325.7869 S759s TMT10 757 (R) FFsPELK (Q) FFS(1.0)PELK K:TMT10,s:Phosphorylated S ZBTB21 120636.9 1 7 692.1 242.92 HUMAN 1 -25.0604 -7.3258 YCVLRRGSLGFYKDA-p O15020;S2254-p YCVLRRGSLGFYKDA 0.497489803830562 0.00656985067540211 -0.0963333333333333 0.544 5.58482482345223 31.3813532416995 -0.0963333333333334 0.544 0.276386940005619 0.000727553067012568 -1.21023306713591 6.85213943215414 O15020 SPTBN2 O15020.S2254.p_SPTBN2 O15020_S2254s _1_1_2254_2254 O15020 O15020|O15020-2|A4QPE4 Spectrin beta chain, non-erythrocytic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13353.13353.3 8.57 8.57 8.566 2 1 1 0 489.2709 1385.8305 S2254s TMT10 2252 (R) RGsLGFYK (D) RGS(0.99)LGFY(0.0)K K:TMT10,s:Phosphorylated S SPTBN2 272689.3 1 14 781.1 225.92 HUMAN 1 -5.5848 31.3814 YDDIYFDSDSEDEDR-p Q56P03;S109-p YDDIYFDSDSEDEDR 0.836155682095094 0.468623666130989 0.03 0.0873333333333333 1.50295281774485 4.3879042443618 0.03 0.0873333333333334 0.707464607563486 0.364090691372901 0.395679490300009 0.990408930029749 Q56P03 EAPP Q56P03.S109.p_EAPP Q56P03_S109sS111s_2_2_109_111 Q56P03 Q56P03|A0A087X060 E2F-associated phosphoprotein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22277.22799.5 16.84 11.01 3.281 8 2 2 0 798.3652 3827.8652 S109s S111s TMT10 94 (K) VATAPTRYYDDIYFDsDsEDEDRAVQVTK (K) VAT(0.0)APT(0.0)RY(0.0)Y(0.0)DDIY(0.0)FDS(0.99)DS(0.99)EDEDRAVQVT(0.0)K K:TMT10,s:Phosphorylated S EAPP 33218.1 15 3 2556.1 78.72 HUMAN 1 1.503 4.3879 YDDVPCESPDAHQPG-p Q9HCE6;S138-p YDDVPCESPDAHQPG 0.340018187144181 0.996467402138272 0.180666666666667 0.000666666666666704 8.71792798723156 0.0216544549401765 0.180666666666667 0.000666666666666691 0.134340574522886 0.99502628756003 1.75953581970118 0.00652618363914322 Q9HCE6 ARHGEF10L Q9HCE6.S138.p_ARHGEF10L Q9HCE6_S138s _1_1_138_138 Q9HCE6 Q9HCE6|Q9HCE6-2|Q9HCE6-3|Q9HCE6-5 Rho guanine nucleotide exchange factor 10-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.30488.30488.4 24.92 24.92 4.325 3 1 1 0 904.1576 3533.6368 S138s TMT10 120 (R) FTFPALEEDVIYDDVPCEsPDAHQPGAER (N) FT(0.0)FPALEEDVIY(0.0)DDVPCES(0.99)PDAHQPGAER C:Carbamidomethylation,s:Phosphorylated S ARHGEF10L 142004.4 3 1 2776.1 71.1 HUMAN 1 8.7179 0.0217 YDDVTVPSPPSKRRK-p Q86W50;S297-p YDDVTVPSPPSKRRK 0.434815870827855 0.183468559212037 0.111333333333333 0.140666666666667 6.66426932060587 9.6857139217209 0.111333333333333 0.140666666666667 0.21556242863861 0.107504986212721 1.40210763735354 1.92640459070097 Q86W50 METTL16 Q86W50.S297.p_METTL16 Q86W50_S297s _1_1_297_297 Q86W50 Q86W50 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36681.36681.3 19.76 19.76 1.667 5 1 1 0 902.1229 2624.3801 S297s TMT10 283 (R) WALAWSFYDDVTVPsPPSK (R) WALAWS(0.0)FY(0.0)DDVT(0.0)VPS(0.99)PPS(0.0)K K:TMT10,s:Phosphorylated S METTL16 64418.6 3 2 1049.1 183.96 HUMAN 1 6.6643 9.6857 YDEGSGGSGDEGRDE-p O94762;S491-p YDEGSGGSGDEGRDE 0.79879406065728 0.107252004257257 -0.045 0.187333333333333 1.8802398797017 12.8077317608128 -0.045 0.187333333333333 0.648598607641182 0.0523873974766916 -0.482113873682272 2.47514418777397 O94762 RECQL5 O94762.S491.p_RECQL5 O94762_S488sS491s_2_2_488_491 O94762 O94762|O94762-4 ATP-dependent DNA helicase Q5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.5763.5763.4 10.75 10.75 4.299 3 2 2 0 621.7575 2324.0791 S488s S491s TMT10 484 (R) YDEGsGGsGDEGRDEAHK (R) Y(0.0)DEGS(0.99)GGS(0.99)GDEGRDEAHK K:TMT10,s:Phosphorylated S RECQL5 110568 9 9 823.1 218.4 HUMAN 1 -1.8802 12.8077 YDENEDLSDVEEIVS-p Q8NHM5;S57-p YDENEDLSDVEEIVS 0.290947943995558 0.0809510946232918 -0.154333333333333 0.192666666666667 10.1080125911275 14.4782210938728 -0.154333333333333 0.192666666666667 0.0975435912438502 0.0356597168666005 -2.00048234752438 2.77941503010075 Q8NHM5 KDM2B Q8NHM5.S57.p_KDM2B Q8NHM5_S57s _1_1_57_57 Q8NHM5 Q8NHM5|Q8NHM5-3|Q8NHM5-2|Q8NHM5-4|F6SRV7|S4R3G4|F5H0A1 Lysine-specific demethylase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23336.23336.3 16.82 16.82 5.73 3 1 1 0 868.7391 2524.2365 S57s TMT10 48 (R) QRYDENEDLsDVEEIVSVR (G) QRY(0.0)DENEDLS(0.99)DVEEIVS(0.0)VR s:Phosphorylated S KDM2B 155065.3 7 1 800.1 223.19 HUMAN 1 -10.108 14.4782 YDEQVEESLQDEDDN-p O00410-3;S845-p YDEQVEESLQDEDDN 0.871036397965817 0.00690810921131733 0.049 0.655666666666667 1.17439621627675 30.9811351518179 0.049 0.655666666666667 0.763062969639412 0.000797786135977593 0.317069400262435 6.72515856051979 O00410 IPO5 O00410.3.S845.p_IPO5 O00410-3_S845s _1_1_845_845 O00410-3 O00410-3 Isoform 3 of Importin-5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.22642.22642.4 24.42 20.06 5.653 4 1 1 0 961.187 3761.7554 S845s TMT10 833 (K) RQDEDYDEQVEEsLQDEDDNDVYILTK (V) RQDEDY(0.0)DEQVEES(0.99)LQDEDDNDVY(0.0)ILT(0.0)K K:TMT10,s:Phosphorylated S IPO5 127026.3 2 3 2973.1 64.3 HUMAN 1 1.1744 30.9811 YDERPGPSPLPHRDR-p P08621;S226-p YDERPGPSPLPHRDR 0.555240727945259 0.261570126891275 0.136 0.262333333333333 4.71865387486817 7.67330896077335 0.136 0.262333333333333 0.337391869346145 0.170871292264029 1.05223823538178 1.57795297336807 P08621 SNRNP70 P08621.S226.p_SNRNP70 P08621_S226s _1_1_226_226 P08621 P08621|P08621-4 U1 small nuclear ribonucleoprotein 70 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6797.6797.4 15.06 15.06 7.159 4 1 1 0 601.787 2324.1581 S226s TMT10 214 (R) DDTSRYDERPGPsPLPHR (D) DDT(0.0)S(0.0)RY(0.0)DERPGPS(0.99)PLPHR s:Phosphorylated S SNRNP70 51612.9 19 3 607.1 262.24 HUMAN 1 4.7187 7.6733 YDFTKFHSLKPKLIE-p Q9H223;S376-p YDFTKFHSLKPKLIE 0.306238582895348 0.178801608725192 -0.292 0.179333333333333 9.63170441809177 9.83198958125658 -0.292 0.179333333333333 0.10885028191961 0.103944386877615 -1.91778977825461 1.95176117908765 Q9H223 EHD4 Q9H223.S376.p_EHD4 Q9H223_S376s _1_1_376_376 Q9H223 Q9NZN4|Q9H223|Q9NZN4-2 EH domain-containing protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.11051.11051.4 9.38 9.38 99 1 1 1 0 406.7456 1543.9927 S376s TMT10 374 (K) FHsLKPK (L) FHS(1.0)LKPK K:TMT10,s:Phosphorylated S EHD4 61402.2 1 4 1561.1 131.45 HUMAN 1 -9.6317 9.832 YDGAASAYAQNYRYP-p J3KNL6;Y1209-p YDGAASAYAQNYRYP 0.157598656025864 0.655353797565744 -0.363333333333333 -0.0843333333333333 16.0962154580018 2.50846129954452 -0.363333333333333 -0.0843333333333333 0.0245684893778654 0.561246789915842 -3.08668651384503 -0.618597158880963 J3KNL6 SEC16A J3KNL6.Y1209.p_SEC16A J3KNL6_Y1209y _1_1_1209_1209 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4 Protein transport protein sec16 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11542.11542.3 19.22 19.22 2.768 5 1 1 0 725.667 2095.0195 Y1209y TMT10 1199 (R) YRPYDGAASAyAQNYR (Y) Y(0.0)RPY(0.0)DGAAS(0.0)AY(0.99)AQNY(0.0)R y:Phosphorylated Y SEC16A 253486.5 7 2 27.1 67.84 HUMAN 1 -16.0962 -2.5085 YDGAGQPSAAYLSMS-p Q96PK6;S555-p YDGAGQPSAAYLSMS 0.428134268468745 0.224256403304952 0.111 0.122333333333333 6.78249008756687 8.55013514444525 0.111 0.122333333333333 0.20977367723117 0.139632490932002 1.42288292147983 1.72989885750606 Q96PK6 RBM14 Q96PK6.S555.p_RBM14 Q96PK6_S555s_1_1_555_555 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.12741.12741.4 8.19 8.19 1.14 8 1 1 0 1005.7131 3923.8456 S555s M561m TMT10 542 (R) GQPGNAYDGAGQPsAAYLSmSQGAVANANSTPPPYER (T) GQPGNAY(0.0)DGAGQPS(0.99)AAY(0.0)LS(0.0)M(1.0)S(0.0)QGAVANANS(0.0)T(0.0)PPPY(0.0)ER s:Phosphorylated S,m:Oxidized methionine RBM14 69661.6 87 13 151.1 510.8 HUMAN 1 6.7825 8.5501 YDIMKSKSNPDFLKK-p Q6WCQ1-2;S993-p YDIMKSKSNPDFLKK 0.30236319502448 0.208852488679825 0.148 0.140333333333333 9.73352887803256 8.94646319846349 0.148 0.140333333333333 0.106327869555255 0.127454061715219 1.9354502553067 1.7984525211698 Q6WCQ1 MPRIP Q6WCQ1.2.S993.p_MPRIP Q6WCQ1-2_S993s _1_1_993_993 Q6WCQ1-2 Q6WCQ1-2|Q6WCQ1-3 Isoform 2 of Myosin phosphatase Rho-interacting protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14959.14959.3 11.18 11.18 1.449 2 1 1 0 601.6724 1723.0357 S993s TMT10 991 (K) SKsNPDFLK (K) S(0.0)KS(0.99)NPDFLK K:TMT10,s:Phosphorylated S MPRIP 118899.7 8 17 204.1 449.03 HUMAN 1 9.7335 8.9465 YDLRMLKSPVKTISA-p Q8NHV4-3;S289-p YDLRMLKSPVKTISA 0.18878716220005 0.103310498956819 -0.257 -0.230666666666667 14.1756028078823 13.0217068992795 -0.257 -0.230666666666667 0.0382331181778241 0.0498688450372524 -2.72521678779876 -2.51359725871414 Q8NHV4 NEDD1 Q8NHV4.3.S289.p_NEDD1 Q8NHV4-3_S289s _1_1_289_289 Q8NHV4-3 Q8NHV4-3|Q8NHV4-2 Isoform 3 of Protein NEDD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13991.13991.3 9.12 5.33 99 1 1 1 0 523.985 1489.9743 S289s TMT10 286 (R) MLKsPVK (T) MLKS(1.0)PVK K:TMT10,s:Phosphorylated S NEDD1 73336.3 2 1 1715.1 119.76 HUMAN 1 -14.1756 -13.0217 YDNFDNISLAQRLEK-p Q00610-2;S1494-p YDNFDNISLAQRLEK 0.274349481664046 0.00900406517052416 -0.192333333333333 0.610333333333333 10.6287386424975 28.9571320805064 -0.192333333333333 0.610333333333333 0.0865219175071491 0.00127141342226428 -2.09118759962477 6.11175088397804 Q00610 CLTC Q00610.2.S1494.p_CLTC Q00610-2_S1494s _1_1_1494_1494 Q00610-2 A0A087WVQ6|Q00610|Q00610-2|J3KS13 Isoform 2 of Clathrin heavy chain 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.22908.22908.3 21.85 21.85 9.8 4 1 1 0 751.3525 2172.077 S1494s TMT10 1482 (R) TSIDAYDNFDNIsLAQR (L) T(0.0)S(0.0)IDAY(0.0)DNFDNIS(0.99)LAQR s:Phosphorylated S CLTC 189655.7 9 8 1116.1 175.54 HUMAN 1 -10.6287 28.9571 YDPDTVASPKPVSST-p A0A087X2H1;S1349-p YDPDTVASPKPVSST 0.0386603595331013 0.00155824147407042 -0.537333333333333 -1.01433333333333 32.1248549463819 45.1692809537549 -0.537333333333333 -1.01433333333333 0.000613076268450931 3.04138853609817e-05 -7.10558660901765 -12.7200298555339 A0A087X2H1 NotFound A0A087X2H1.S1349.p_NotFound A0A087X2H1_S1349s _1_1_1349_1349 A0A087X2H1 A0A087X2H1|Q9ULT8 E3 ubiquitin-protein ligase HECTD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.27021.27021.4 14.06 13.58 1.147 12 1 1 0 1008.2816 3950.1366 S1349s TMT10 1338 (K) LAPGYDPDTVAsPKPVSSTVSGTTQSWSSLVK (N) LAPGY(0.0)DPDT(0.0)VAS(0.99)PKPVS(0.0)S(0.0)T(0.0)VS(0.0)GT(0.0)T(0.0)QS(0.0)WS(0.0)S(0.0)LVK K:TMT10,s:Phosphorylated S HECTD1 292594.4 1 7 365.1 342.23 HUMAN 1 -32.1249 -45.1693 YDPRFTGSFDDDPDP-p J3KNL6;S1327-p YDPRFTGSFDDDPDP 0.175973502111451 0.803382196777804 0.212333333333333 -0.0356666666666667 14.9976471328263 1.33094804231003 0.212333333333333 -0.0356666666666667 0.031639913441925 0.736046404846784 2.8780099015048 -0.354913390526055 J3KNL6 SEC16A J3KNL6.S1327.p_SEC16A J3KNL6_S1327s _1_1_1327_1327 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.13160.13160.5 20.89 20.89 2.176 3 1 1 0 607.07 2951.3394 S1327s TMT10 1324 (R) FTGsFDDDPDPHRDPYGEEVDRR (S) FT(0.0)GS(0.99)FDDDPDPHRDPY(0.0)GEEVDRR s:Phosphorylated S SEC16A 253486.5 2 27 15.1 1143.82 HUMAN 1 14.9976 -1.3309 YDPTIEDSYRKQVEV-p P62834;S39-p YDPTIEDSYRKQVEV 0.135172259701023 0.00248584650157384 -0.521333333333333 0.779 17.8273837531511 39.8576067999534 -0.521333333333334 0.779 0.0164915556526049 0.000103333067059602 -3.42741500599007 10.0674976011229 P62834 RAP1A P62834.S39.p_RAP1A P62834_S39s _1_1_39_39 P62834 P62834 Ras-related protein Rap-1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.12503.12503.3 13.42 10.15 4.342 4 1 1 0 642.3199 1844.9795 S39s TMT10 32 (K) YDPTIEDsYRK (Q) Y(0.0)DPT(0.0)IEDS(0.99)Y(0.0)RK K:TMT10,s:Phosphorylated S RAP1A 21329.1 1 2 4850.1 25.89 HUMAN 1 -17.8274 39.8576 YDRLRPLSYPQTVGE-p P63000-2;S71-p YDRLRPLSYPQTVGE 0.0990071654541326 0.132120411845583 -0.363666666666667 -0.606333333333333 21.2600744417198 11.5877525554202 -0.363666666666667 -0.606333333333334 0.0074815667636778 0.0693784742048176 -4.15474702989699 -2.25833790218786 P63000 RAC1 P63000.2.S71.p_RAC1 P63000-2_S71s _1_1_71_71 P63000-2 P63000-2 Isoform B of Ras-related C3 botulinum toxin substrate 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.19687.19687.3 13.1 13.1 2.326 5 1 1 0 783.087 2267.28 S71s TMT10 67 (R) LRPLsYPQTVGETYGK (D) LRPLS(0.99)Y(0.0)PQT(0.0)VGET(0.0)Y(0.0)GK K:TMT10,s:Phosphorylated S RAC1 23866.3 2 1 4835.1 26.09 HUMAN 1 -21.2601 -11.5878 YDRSLQRSPPVRLGS-p Q8N2Y8;S506-p YDRSLQRSPPVRLGS 0.799823967273654 0.258114572033225 -0.0406666666666667 -0.120666666666667 1.87004318016858 7.74964195770982 -0.0406666666666667 -0.120666666666667 0.650123226394955 0.167894242826556 -0.479825878422267 -1.59121001008035 Q8N2Y8 RUSC2 Q8N2Y8.S506.p_RUSC2 Q8N2Y8_S506s _1_1_506_506 Q8N2Y8 Q8N2Y8 Iporin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.5746.5746.3 9.33 9.33 2.182 2 1 1 0 450.2485 1268.7636 S506s TMT10 502 (R) SLQRsPPVR (L) S(0.0)LQRS(0.99)PPVR s:Phosphorylated S RUSC2 163333.5 2 1 1536.1 133.33 HUMAN 1 -1.87 -7.7496 YDTDYRHSYEYQREN-p P49760;S98-p YDTDYRHSYEYQREN 0.733661193423071 0.0537054539244176 0.0546666666666666 0.341333333333333 2.54579173815178 16.9301426422678 0.0546666666666666 0.341333333333333 0.556443182944504 0.0202761612219533 0.626544899160783 3.24642738170957 P49760 CLK2 P49760.S98.p_CLK2 P49760_S83sS98s_2_2_83_98 P49760 P49760|P49760-3|B1AVT0|P49760-2 Dual specificity protein kinase CLK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.8587.8587.4 8.11 8.11 1.863 9 2 2 0 875.1061 3337.4732 S83s S98s TMT10 80 (R) NDYsRDRGDAYYDTDYRHsYEYQR (E) NDY(0.0)S(0.99)RDRGDAY(0.0)Y(0.0)DT(0.0)DY(0.0)RHS(0.99)Y(0.0)EY(0.0)QR s:Phosphorylated S CLK2 60545.5 2 8 1587.1 129.39 HUMAN 1 2.5458 16.9301 YDTLSKCSPKMPPAP-p Q9UHR4;S281-p YDTLSKCSPKMPPAP 0.465470814226042 0.0247429756117273 -0.118666666666667 -0.478666666666667 6.13009732708995 21.8563916086301 -0.118666666666667 -0.478666666666667 0.243775618668815 0.00652170032847103 -1.3077063824403 -4.28467395137041 Q9UHR4 BAIAP2L1 Q9UHR4.S281.p_BAIAP2L1 Q9UHR4_S281s _1_1_281_281 Q9UHR4 Q9UHR4 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.8371.8371.3 12.91 6.22 12.912 2 1 1 0 608.3075 1742.9446 S281s TMT10 280 (K) CsPKMPPAPSGR (A) CS(0.99)PKMPPAPS(0.0)GR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BAIAP2L1 57224 8 7 661.1 251.53 HUMAN 1 -6.1301 -21.8564 YDVFRQLSLEGSGLG-p Q9UMZ2;S752-p YDVFRQLSLEGSGLG 0.159845829771225 0.0327294099456349 -0.294666666666667 0.269 15.9411577299764 20.0377693209335 -0.294666666666667 0.269 0.0254615141624722 0.00991340999437557 -3.05690008730419 3.8834181251437 Q9UMZ2 SYNRG Q9UMZ2.S752.p_SYNRG Q9UMZ2_S752s _1_1_752_752 Q9UMZ2 Q9UMZ2|Q9UMZ2-5|Q9UMZ2-7|Q9UMZ2-3|Q9UMZ2-8|Q9UMZ2-4|Q9UMZ2-9|Q9UMZ2-6 Synergin gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27313.27313.4 17.28 14.88 1.253 7 1 1 0 999.5227 3915.1067 S752s TMT10 734 (K) GGQNSTAASTKYDVFRQLsLEGSGLGVEDLK (D) GGQNS(0.0)T(0.0)AAS(0.0)T(0.0)KY(0.0)DVFRQLS(0.99)LEGS(0.0)GLGVEDLK K:TMT10,s:Phosphorylated S SYNRG 141393.5 11 5 236.1 418.49 HUMAN 1 -15.9412 20.0378 YDVPGRRSFRGCGQI-p Q9UJM3;S200-p YDVPGRRSFRGCGQI 0.635724767588479 0.876279280223965 0.077 -0.055 3.66881277466586 0.806908997798617 0.077 -0.0550000000000001 0.429653864645975 0.830441607069377 0.853268682975923 -0.224695077375964 Q9UJM3 ERRFI1 Q9UJM3.S200.p_ERRFI1 Q9UJM3_S200s_1_1_200_200 Q9UJM3 Q9UJM3 ERBB receptor feedback inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.23747.23747.5 7.01 7.01 7.006 9 1 1 0 1066.7045 5248.5133 S200s N229n TMT10 200 (R) sFRGCGQINYAYFDTPAVSAADLSYVSDQnGGVPDPNPPPPQTHRR (L) S(0.99)FRGCGQIN(0.0)Y(0.0)AY(0.0)FDT(0.0)PAVS(0.0)AADLS(0.0)Y(0.0)VS(0.0)DQN(0.99)GGVPDPN(0.0)PPPPQT(0.0)HRR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated ERRFI1 51186.7 2 2 1507.1 135.54 HUMAN 1 3.6688 -0.8069 YDVPPRLSPPPPVTT-p Q13191;S672-p YDVPPRLSPPPPVTT 0.586619055126329 0.137368012012667 0.0926666666666667 0.154 4.26212213007062 11.3597953974592 0.0926666666666667 0.154 0.374789820756061 0.0731173529336226 0.966914466044895 2.21822872350088 Q13191 CBLB Q13191.S672.p_CBLB Q13191_S672s _1_1_672_672 Q13191 Q13191|Q13191-2|Q13191-3|Q68CY2 E3 ubiquitin-protein ligase CBL-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31133.31336.5 21.85 13.5 1.797 7 1 1 0 797.2301 3902.1468 S672s TMT10 654 (K) VFSNGHLGSEEYDVPPRLsPPPPVTTLLPSIK (C) VFS(0.0)NGHLGS(0.0)EEY(0.0)DVPPRLS(0.99)PPPPVT(0.0)T(0.0)LLPS(0.0)IK K:TMT10,s:Phosphorylated S CBLB 110931.2 2 2 2170.1 94.64 HUMAN 1 4.2621 11.3598 YEALKDDSWLKGEFV-p P40925-3;S235-p YEALKDDSWLKGEFV 0.286012107084712 0.00422755426421801 -0.405666666666667 0.622666666666667 10.2568031623913 34.9172103724301 -0.405666666666667 0.622666666666667 0.0942583175811801 0.000322313846271064 -2.02636338936759 8.06378523446034 P40925 MDH1 P40925.3.S235.p_MDH1 P40925-3_S235s _1_1_235_235 P40925-3 P40925-3|P40925-2|B9A041|B8ZZ51 Isoform 3 of Malate dehydrogenase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.28373.28373.3 19.56 12.14 13.031 2 1 1 0 840.4531 2439.3738 S235s TMT10 224 (K) EVGVYEALKDDsWLK (G) EVGVY(0.0)EALKDDS(0.99)WLK K:TMT10,s:Phosphorylated S MDH1 38912.2 2 2 2746.1 71.96 HUMAN 1 -10.2568 34.9172 YEARHVVSPEQIATS-p Q9H582;S1000-p YEARHVVSPEQIATS 0.431193631119531 0.0568726193226686 -0.109666666666667 -0.235 6.72523218389563 16.5922148017483 -0.109666666666667 -0.235 0.212557670392235 0.0219168694047988 -1.4128255396134 -3.18039282290798 Q9H582 ZNF644 Q9H582.S1000.p_ZNF644 Q9H582_S1000s _1_1_1000_1000 Q9H582 Q9H582|Q9H582-2|A0A087WZL9 Zinc finger protein 644 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13379.13379.3 15.31 15.31 8.335 3 1 1 0 650.344 1869.0482 S1000s TMT10 997 (R) HVVsPEQIATSDK (M) HVVS(0.99)PEQIAT(0.0)S(0.0)DK K:TMT10,s:Phosphorylated S ZNF644 151445.4 2 6 1099.1 177.93 HUMAN 1 -6.7252 -16.5922 YEDIANRSRAEAESM-p P05787;S274-p YEDIANRSRAEAESM 0.831901048906948 0.0110512162888973 0.0406666666666667 0.547333333333333 1.54078802419391 27.4020326738899 0.0406666666666667 0.547333333333333 0.701328031410401 0.00181884936426589 0.40452105970785 5.67103015279649 P05787 KRT8 P05787.S274.p_KRT8 P05787_S274s _1_1_274_274 P05787 P05787-2 Keratin, type II cytoskeletal 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.25761.25761.3 17.71 17.71 4.82 5 1 1 0 1023.8517 2989.5705 S274s Hydrogen 274 (R) sRAEAESMYQIKYEELQSLAGK (H) S(0.99)RAEAES(0.0)MY(0.0)QIKY(0.0)EELQS(0.0)LAGK K:TMT10-Lys-Only,s:Phosphorylated S KRT8 53703.3 35 21 69.1 672.47 HUMAN 1 1.5408 27.402 YEDLDEVSSTSSVSQ-p P35658-3;S986-p YEDLDEVSSTSSVSQ 0.233628206047255 0.148564585809927 0.241666666666667 0.235333333333333 12.1043476043643 10.9009285048685 0.241666666666667 0.235333333333333 0.061597805417121 0.0812656754707096 2.35085669746549 2.1378079169721 P35658 NUP214 P35658.3.S986.p_NUP214 P35658-3_S986sS987s_2_2_986_987 P35658-3 P35658-5|P35658-3|P35658-4|P35658-2|A0A0A0MSW3 Isoform 3 of Nuclear pore complex protein Nup214 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22699.22906.3 23.22 23.22 1.239 10 2 2 0 1029.0929 2925.3323 S986s S987s TMT10 978 (R) YYEDLDEVssTSSVSQSLESEDAR (T) Y(0.0)Y(0.0)EDLDEVS(0.99)S(0.99)T(0.0)S(0.0)S(0.0)VS(0.0)QS(0.0)LES(0.0)EDAR s:Phosphorylated S NUP214 214428.5 3 36 111.1 572.27 HUMAN 1 12.1043 10.9009 YEEPRRHSPPIEKQL-p Q8IZD4;S283-p YEEPRRHSPPIEKQL 0.502031518920472 0.217978266115379 0.121333333333333 0.186333333333333 5.51948555636379 8.70566805615998 0.121333333333333 0.186333333333333 0.280576597534598 0.134720347500083 1.19846239078276 1.75680406347696 Q8IZD4 DCP1B Q8IZD4.S283.p_DCP1B Q8IZD4_S283s _1_1_283_283 Q8IZD4 Q8IZD4|Q8IZD4-2|F5GZK9 mRNA-decapping enzyme 1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8515.8515.4 13.48 11.4 3.713 4 1 1 0 616.575 2383.3134 S283s TMT10 273 (R) SLSYEEPRRHsPPIEK (Q) S(0.0)LS(0.0)Y(0.0)EEPRRHS(0.99)PPIEK K:TMT10,s:Phosphorylated S DCP1B 68121.1 8 5 577.1 267.77 HUMAN 1 5.5195 8.7057 YEEVGADSADGEDEG-p F5H5D3;S509-p YEEVGADSADGEDEG 0.317706123497666 0.0658497091461924 -0.524 0.353666666666667 9.32705269398497 15.7189460932801 -0.524 0.353666666666667 0.116760173216186 0.0267981856014294 -1.86499339317886 3.01232677788497 F5H5D3 TUBA1C F5H5D3.S509.p_TUBA1C F5H5D3_S509s _1_1_509_509 F5H5D3 F5H5D3|Q9BQE3 Tubulin alpha chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.14621.15300.2 16.67 16.67 2.31 3 1 1 0 1194.4406 2307.9098 S509s TMT10 501 (K) DYEEVGADsADGEDEGEEY (-) DY(0.0)EEVGADS(0.99)ADGEDEGEEY(0.0) s:Phosphorylated S TUBA1C 58642 1 2 868.2 210.03 HUMAN 1 -9.3271 15.7189 YEEVGVDSVEGEGEE-p P68363;S439-p YEEVGVDSVEGEGEE 0.273234254805572 0.00287163181604281 -0.448333333333333 0.749666666666667 10.6705625504107 38.4440517661735 -0.448333333333333 0.749666666666667 0.0856926838577562 0.000143085235745715 -2.09848980834021 9.45307138148901 P68363 TUBA1B P68363.S439.p_TUBA1B P68363_S439s _1_1_439_439 P68363 Q71U36|P68363|Q71U36-2|P68363-2 Tubulin alpha-1B chain HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.18352.18352.2 14.91 14.91 2.26 3 1 1 0 1329.5234 2578.0678 S439s TMT10 431 (K) DYEEVGVDsVEGEGEEEGEEY (-) DY(0.0)EEVGVDS(0.99)VEGEGEEEGEEY(0.0) s:Phosphorylated S TUBA1B 50835.4 2 15 868.1 210.03 HUMAN 1 -10.6706 38.4441 YEEYSGLSDGYGFTT-p P52597;S250-p YEEYSGLSDGYGFTT 0.77229189221493 0.888045750838673 -0.0583333333333333 -0.022 2.14529216787819 0.724838397329595 -0.0583333333333333 -0.022 0.610198004717755 0.846284058781255 -0.540742919685969 -0.203338224052228 P52597 HNRNPF P52597.S250.p_HNRNPF P52597_S250s _1_1_250_250 P52597 P52597 Heterogeneous nuclear ribonucleoprotein F HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.29001.29001.3 30.18 30.18 2.369 11 1 1 0 1261.8828 3703.6849 S250s TMT10 231 (R) MRPGAYSTGYGGYEEYSGLsDGYGFTTDLFGR (D) MRPGAY(0.0)S(0.0)T(0.0)GY(0.0)GGY(0.0)EEY(0.0)S(0.0)GLS(0.99)DGY(0.0)GFT(0.0)T(0.0)DLFGR s:Phosphorylated S HNRNPF 46013.4 2 14 990.1 191.56 HUMAN 1 -2.1453 -0.7248 YEFHLPLSPEELLKS-p Q15021;S13-p YEFHLPLSPEELLKS 0.790000475046438 0.0445942976251031 -0.045 0.258666666666667 1.97670526819358 18.0811618148264 -0.045 0.258666666666667 0.634350772649552 0.0155554943885217 -0.503637053065857 3.47584774396819 Q15021 NCAPD2 Q15021.S13.p_NCAPD2 Q15021_S13s _1_1_13_13 Q15021 Q15021|F5H431 Condensin complex subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.37293.37293.3 14.2 14.2 4.015 2 1 1 0 875.4289 2544.308 S13s Acetyl 1 (-) MAPQMYEFHLPLsPEELLK (S) MAPQMY(0.0)EFHLPLS(0.99)PEELLK K:TMT10,s:Phosphorylated S NCAPD2 158605.7 1 1 1192.1 168.06 HUMAN 1 -1.9767 18.0812 YEGRTYYSPVYRSPN-p Q99569;S422-p YEGRTYYSPVYRSPN 0.978025667679098 0.932386782668781 -0.00700000000000001 -0.0123333333333333 0.190577434300303 0.428527040943431 -0.007 -0.0123333333333333 0.957066812034343 0.906039842495153 -0.0563741668334036 -0.123659361151278 Q99569 PKP4 Q99569.S422.p_PKP4 Q99569_S422s _1_1_422_422 Q99569 A0A0D9SF60|Q99569|Q99569-2 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.12798.12798.2 11.13 11.13 2.753 5 1 1 0 679.3235 1277.6728 S422s TMT10 419 (R) TYYsPVYR (S) T(0.0)Y(0.0)Y(0.0)S(0.99)PVY(0.0)R s:Phosphorylated S PKP4 132664.7 1 15 122.1 546.31 HUMAN 1 -0.1906 -0.4285 YEGSEEVSPPQTKDQ-p Q93008;S2563-p YEGSEEVSPPQTKDQ 0.256626955344017 0.107252004257257 -0.176333333333333 -0.173666666666667 11.2211503613193 12.8081774955858 -0.176333333333333 -0.173666666666667 0.0754892244958733 0.0523820210126938 -2.19489920198422 -2.47522414578808 Q93008 USP9X Q93008.S2563.p_USP9X Q93008_S2563s _1_1_2563_2563 Q93008 Q93008|Q93008-1 Probable ubiquitin carboxyl-terminal hydrolase FAF-X HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11409.11409.3 19.12 19.12 3.583 4 1 1 0 811.0535 2351.1767 S2563s TMT10 2552 (R) AQENYEGSEEVsPPQTK (D) AQENY(0.0)EGS(0.0)EEVS(0.99)PPQT(0.0)K K:TMT10,s:Phosphorylated S USP9X 295697.8 3 7 1218.1 165.22 HUMAN 1 -11.2212 -12.8082 YEGSQRNSTELAPPL-p Q9H7D0;S1834-p YEGSQRNSTELAPPL 0.0775649771385732 0.354584586872025 -0.402666666666667 -0.135666666666667 23.7609322861048 5.97106390220571 -0.402666666666667 -0.135666666666667 0.00420636322035019 0.252867846378918 -4.73665020402949 -1.27910421079629 Q9H7D0 DOCK5 Q9H7D0.S1834.p_DOCK5 Q9H7D0_S1834s _1_1_1834_1834 Q9H7D0 Q9H7D0 Dedicator of cytokinesis protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13598.13598.3 15.02 15.02 1.585 2 1 1 0 510.5994 1449.8172 S1834s Hydrogen 1833 (R) NsTELAPPLPVRR (E) NS(0.99)T(0.0)ELAPPLPVRR s:Phosphorylated S DOCK5 216331.8 4 12 828.1 217.17 HUMAN 1 -23.7609 -5.9711 YEGVLNKSPKTRDIQ-p Q13459;S1935-p YEGVLNKSPKTRDIQ 0.237800187730078 0.00229787700279713 -0.403666666666667 -0.843 11.9490248134154 40.6807139988808 -0.403666666666667 -0.843 0.0638406821162946 8.5492614778003e-05 -2.32329626955568 -10.4418185514135 Q13459 MYO9B Q13459.S1935.p_MYO9B Q13459_S1935s _1_1_1935_1935 Q13459 Q13459|M0R0P8|Q13459-2 Unconventional myosin-IXb HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.23514.23514.3 16.39 9.4 4.506 4 1 1 0 830.7916 2410.3949 S1935s TMT10 1922 (K) LGFSSPYEGVLNKsPK (T) LGFS(0.0)S(0.0)PY(0.0)EGVLNKS(0.99)PK K:TMT10,s:Phosphorylated S MYO9B 244993.9 2 18 211.1 438.12 HUMAN 1 -11.949 -40.6807 YEHTSRFSPKKTSSN-p P46100;S316-p YEHTSRFSPKKTSSN 0.94478758147709 0.0260842181730162 0.0113333333333333 -0.386 0.483724744743094 21.5327622146173 0.0113333333333333 -0.386 0.894597181430812 0.00702625291597636 0.138840338550321 -4.21156180628622 P46100 ATRX P46100.S316.p_ATRX P46100_S316s _1_1_316_316 P46100 P46100|P46100-4|P46100-3|P46100-5|P46100-2|P46100-6 Transcriptional regulator ATRX HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7869.7869.5 16.76 16.76 1.277 4 1 1 0 450.052 2166.2638 S316s TMT10 308 (K) VYEHTSRFsPKK (T) VY(0.0)EHT(0.0)S(0.0)RFS(0.99)PKK K:TMT10,s:Phosphorylated S ATRX 285034.2 4 8 18.1 1035.36 HUMAN 1 0.4837 -21.5328 YEITAEDSQEKVADE-p Q9H814;S226-p YEITAEDSQEKVADE 0.112267082034582 0.00967750202689351 -0.549333333333333 0.879666666666667 19.832074650851 28.3725074018253 -0.549333333333333 0.879666666666667 0.0103942350835113 0.00145461901292916 -3.84300410618024 5.94308307201882 Q9H814 PHAX Q9H814.S226.p_PHAX Q9H814_S226s _1_1_226_226 Q9H814 Q9H814 Phosphorylated adapter RNA export protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9632.9632.3 11.9 11.9 6.745 3 1 1 0 688.6738 1984.0388 S226s TMT10 217 (K) GRYEITAEDsQEK (V) GRY(0.0)EIT(0.0)AEDS(0.99)QEK K:TMT10,s:Phosphorylated S PHAX 44573 1 4 2401.1 85.13 HUMAN 1 -19.8321 28.3725 YEKDGSASPAVTKDQ-p Q96RL7;S1348-p YEKDGSASPAVTKDQ 0.30137742196241 0.00692021347828457 -0.238 0.551333333333333 9.77606771889061 30.9657140949592 -0.238 0.551333333333334 0.105291479477213 0.000800623973932794 -1.9428307246125 6.72030458686934 Q96RL7 VPS13A Q96RL7.S1348.p_VPS13A Q96RL7_S1348s _1_1_1348_1348 Q96RL7 Q96RL7|Q96RL7-3|Q96RL7-2|Q96RL7-4 Vacuolar protein sorting-associated protein 13A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7779.7779.2 13.14 8.3 2.486 3 1 1 0 735.8846 1390.7942 S1348s TMT10 1344 (K) DGSAsPAVTK (D) DGS(0.0)AS(0.99)PAVT(0.0)K K:TMT10,s:Phosphorylated S VPS13A 362095.2 2 2 2912.1 66.12 HUMAN 1 -9.7761 30.9657 YEKKRSGSLERDRPG-p Q8IXT5;S377-p YEKKRSGSLERDRPG 0.766667060694937 0.00455061128120994 -0.0866666666666667 0.64 2.21228429349957 34.317413989088 -0.0866666666666667 0.64 0.6008576164572 0.00037004845992277 -0.555317073041776 7.84628018641111 Q8IXT5 RBM12B Q8IXT5.S377.p_RBM12B Q8IXT5_S377s _1_1_377_377 Q8IXT5 Q8IXT5|B9ZVT1 RNA-binding protein 12B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.3596.3596.3 7.01 7.01 1.683 2 1 1 0 371.8586 1033.5952 S377s TMT10 374 (K) RSGsLER (D) RS(0.0)GS(0.99)LER s:Phosphorylated S RBM12B 118442.9 2 5 384.1 333.8 HUMAN 1 -2.2123 34.3174 YEKTEVNSGFFYKSA-p P40227;S246-p YEKTEVNSGFFYKSA 0.340030512994892 0.0523931863384115 -0.199333333333333 -0.394 8.71642536655822 17.0849017855309 -0.199333333333333 -0.394 0.134387063220851 0.0195663501618225 -1.75927570809268 -3.27686314083019 P40227 CCT6A P40227.S246.p_CCT6A P40227_S246s _1_1_246_246 P40227 P40227|Q92526|P40227-2|Q92526-2 T-complex protein 1 subunit zeta HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.21308.21308.3 7.74 7.74 3.929 3 1 1 0 577.2911 1649.8939 S246s TMT10 242 (K) TEVNsGFFYK (S) T(0.0)EVNS(0.99)GFFY(0.0)K K:TMT10,s:Phosphorylated S CCT6A 58479.6 1 3 4616.1 28.76 HUMAN 1 -8.7164 -17.0849 YEKVGEATETALTCL-p P16615;T441-p YEKVGEATETALTCL 0.864453015861562 0.697984431168487 0.0256666666666667 0.0376666666666667 1.23302120823543 2.14670667068673 0.0256666666666667 0.0376666666666667 0.752831667475173 0.60999929479122 0.331349543457277 0.540987081075669 P16615 ATP2A2 P16615.T441.p_ATP2A2 P16615_T441t _1_1_441_441 P16615 Q93084-5|Q93084-6|P16615|Q93084-7|Q93084-3|P16615-4|P16615-3|Q93084-2|Q93084-4|P16615-2|P16615-5 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.28883.28883.2 15.43 9.89 2.266 3 1 1 0 1080.0586 2079.1408 T441t TMT10 437 (K) VGEAtETALTCLVEK (M) VGEAT(0.99)ET(0.0)ALT(0.0)CLVEK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T ATP2A2 116409.4 3 5 1240.1 162.94 HUMAN 1 1.233 2.1467 YELEKRTSPQVLGSI-p Q7Z417;S572-p YELEKRTSPQVLGSI 0.75565524012287 0.022737311866131 -0.0433333333333333 -0.309333333333333 2.32649839650052 22.4375129491868 -0.0433333333333334 -0.309333333333333 0.585261775316535 0.00570490878692012 -0.579952062259689 -4.41790883198037 Q7Z417 NUFIP2 Q7Z417.S572.p_NUFIP2 Q7Z417_S572s _1_1_572_572 Q7Z417 Q7Z417 Nuclear fragile X mental retardation-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.26088.26088.2 8 8 1.141 3 1 1 0 840.9863 1601.0038 S572s TMT10 571 (R) TsPQVLGSILK (S) T(0.0)S(0.99)PQVLGS(0.0)ILK K:TMT10,s:Phosphorylated S NUFIP2 76176.8 20 14 304.1 375.48 HUMAN 1 -2.3265 -22.4375 YELRKAPSDLYQIIL-p P07384;S232-p YELRKAPSDLYQIIL 0.259441883712572 0.0555478158470648 -0.237666666666667 0.347333333333333 11.1217413962966 16.7251697678822 -0.237666666666667 0.347333333333333 0.0772370824451863 0.0212560725254385 -2.17745123928499 3.20630493365759 P07384 CAPN1 P07384.S232.p_CAPN1 P07384_S232s _1_1_232_232 P07384 P07384 Calpain-1 catalytic subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.28348.28348.3 12.66 12.66 5.61 2 1 1 0 719.4282 2076.3036 S232s TMT10 229 (R) KAPsDLYQIILK (A) KAPS(0.99)DLY(0.0)QIILK K:TMT10,s:Phosphorylated S CAPN1 82516.1 1 3 1866.1 110.2 HUMAN 1 -11.1217 16.7252 YEMRDKLSGEYEKFV-p P34932;S633-p YEMRDKLSGEYEKFV 0.375455658906021 0.626249390203376 -0.256333333333333 0.0566666666666667 7.86865686307585 2.76535133253296 -0.256333333333333 0.0566666666666667 0.163355707786341 0.529011199897962 -1.61236754406622 0.672245574846115 P34932 HSPA4 P34932.S633.p_HSPA4 P34932_S633s _1_1_633_633 P34932 P34932|A0A087WYC1 Heat shock 70 kDa protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.11007.11007.3 11.66 11.66 8.563 2 1 1 0 612.665 1756.0096 S633s TMT10 630 (R) DKLsGEYEK (F) DKLS(0.99)GEY(0.0)EK K:TMT10,s:Phosphorylated S HSPA4 95185.1 1 16 549.1 274.67 HUMAN 1 -7.8687 2.7654 YENPHYQSPNMHRRV-p Q8TDN6;S261-p YENPHYQSPNMHRRV 0.909181246168202 0.194872434006408 0.0173333333333333 0.183333333333333 0.811800366702502 9.3383084787156 0.0173333333333333 0.183333333333333 0.829506824379327 0.116457952987308 0.225980622689642 1.86624394610846 Q8TDN6 BRIX1 Q8TDN6.S261.p_BRIX1 Q8TDN6_S261s _1_1_261_261 Q8TDN6 Q8TDN6 Ribosome biogenesis protein BRX1 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.20751.20751.4 21.84 21.84 3.847 5 1 1 0 772.361 3006.4518 S261s TMT10 243 (K) IFQGSFGGPTLYENPHYQsPNMHR (R) IFQGS(0.0)FGGPT(0.0)LY(0.0)ENPHY(0.0)QS(0.99)PNMHR s:Phosphorylated S BRIX1 41685.9 3 2 4027.1 38.9 HUMAN 1 0.8118 9.3383 YEPAKMKTPVQYSQQ-p P46013;T347-p YEPAKMKTPVQYSQQ 0.864600530417718 0.0181705265422931 -0.0256666666666667 -0.39 1.23018480793103 23.9676466962018 -0.0256666666666667 -0.39 0.753323506425457 0.00401083993425955 -0.330661296505263 -4.78132698859427 P46013 MKI67 P46013.T347.p_MKI67 P46013_T347tS357s_2_2_347_357 P46013 P46013 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.12648.12648.4 12.01 12.01 2.142 4 2 2 0 685.8438 2579.4219 T347t N356n S357s TMT10 345 (K) MKtPVQYSQQQnsPQK (H) MKT(0.99)PVQY(0.0)S(0.0)QQQN(1.0)S(0.99)PQK K:TMT10,t:Phosphorylated T,n:Deamidated,s:Phosphorylated S MKI67 360912.4 4 97 5.1 1918.46 HUMAN 1 -1.2302 -23.9676 YEPEGSASPTPPYLK-p O15169;S77-p YEPEGSASPTPPYLK 0.705318681884225 0.579373333192034 0.0511666666666667 0.0528333333333333 2.85143401222033 3.19885431199077 0.0511666666666667 0.0528333333333334 0.518628762798608 0.47875637370931 0.690071881720226 0.760409532584679 O15169 AXIN1 O15169.S77.p_AXIN1 O15169_S75sS77s_2_2_75_77 O15169 O15169|O15169-2 Axin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.24110.24110.3 15.47 13.15 1.757 6 2 2 0 1004.1447 2850.4926 S75s S77s TMT10 63 (R) RSDLDLGYEPEGsAsPTPPYLK (W) RS(0.0)DLDLGY(0.0)EPEGS(0.99)AS(0.99)PT(0.0)PPY(0.0)LK K:TMT10,s:Phosphorylated S AXIN1 96546.1 1 4 3085.1 61.16 HUMAN 2 2.8514 3.1989 YEPPVQESV______-p P61247;S263-p YEPPVQESV______ 0.779056963761954 0.66329592075741 -0.0393333333333333 0.0523333333333334 2.08252871048554 2.44202744431758 -0.0393333333333334 0.0523333333333334 0.619080506090657 0.56989816101795 -0.527002025467612 0.604533978463535 P61247 RPS3A P61247.S263.p_RPS3A P61247_S263s _1_1_263_263 P61247 P61247|D6RAT0|D6R9B6 40S ribosomal protein S3a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14581.14581.2 17.85 17.85 17.85 2 1 1 0 992.471 1903.9599 S263s TMT10 250 (K) VERADGYEPPVQEsV (-) VERADGY(0.0)EPPVQES(0.99)V s:Phosphorylated S RPS3A 30172.6 8 2 2290.1 89.54 HUMAN 1 -2.0825 2.442 YEPRYRPYDGAASAY-p J3KNL6;Y1202-p YEPRYRPYDGAASAY 0.167474891729899 0.518976584457085 -0.711666666666667 -0.201666666666667 15.5111240099473 3.82694047267367 -0.711666666666667 -0.201666666666667 0.0281117316848552 0.414291432979142 -2.97487392874045 -0.88375615756732 J3KNL6 SEC16A J3KNL6.Y1202.p_SEC16A J3KNL6_Y1202y _1_1_1202_1202 J3KNL6 J3KNL6|F1T0I1|O15027-5|O15027-3|O15027-4|O15027-2 Protein transport protein sec16 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.13199.13235.4 18.77 11.37 2.135 8 1 1 0 844.1443 3293.5926 Y1202y TMT10 1199 (R) YRPyDGAASAYAQNYRYPEPERPSSR (A) Y(0.0)RPY(0.99)DGAAS(0.0)AY(0.0)AQNY(0.0)RY(0.0)PEPERPS(0.0)S(0.0)R y:Phosphorylated Y SEC16A 253486.5 7 1 27.1 67.84 HUMAN 1 -15.5111 -3.8269 YEPYGMYSDDDANSD-p Q7Z460-4;S801-p YEPYGMYSDDDANSD 0.507628685002638 0.0730937661413829 0.115333333333333 0.224333333333333 5.43194200975122 15.0885196077013 0.115333333333333 0.224333333333333 0.286289749816642 0.0309847530556133 1.18265785743052 2.89316805045164 Q7Z460 CLASP1 Q7Z460.4.S801.p_CLASP1 Q7Z460-4_S801s _1_1_801_801 Q7Z460-4 Q7Z460|Q7Z460-3|Q7Z460-5|F8WA11|Q7Z460-4|Q7Z460-2 Isoform 4 of CLIP-associating protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.12590.12590.3 15.29 15.29 4.874 8 1 1 0 1028.4146 3003.257 S801s TMT10 793 (R) RYEPYGMYsDDDANSDASSVCSER (S) RY(0.0)EPY(0.0)GMY(0.0)S(0.99)DDDANS(0.0)DAS(0.0)S(0.0)VCS(0.0)ER C:Carbamidomethylation,s:Phosphorylated S CLASP1 164028.5 1 48 158.3 498.15 HUMAN 1 5.4319 15.0885 YERFHTESLQGRSKQ-p Q96MH2;S204-p YERFHTESLQGRSKQ 0.1614589620196 0.286889003187015 0.255333333333333 0.140333333333333 15.8524129373034 7.15360504702535 0.255333333333333 0.140333333333333 0.0259871531745928 0.192592555262796 3.03990303155853 1.48745505546125 Q96MH2 HEXIM2 Q96MH2.S204.p_HEXIM2 Q96MH2_S204s _1_1_204_204 Q96MH2 Q96MH2 Protein HEXIM2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.7928.7928.3 9.92 9.92 1.111 2 1 1 0 461.8933 1303.6956 S204s TMT10 200 (R) FHTEsLQGR (S) FHT(0.0)ES(0.99)LQGR s:Phosphorylated S HEXIM2 32760.3 1 14 1285.1 158.28 HUMAN 1 15.8524 7.1536 YERGGDVSPSPYSSS-p Q14004-2;S383-p YERGGDVSPSPYSSS 0.709048635395475 0.0990132716732784 -0.0506666666666667 0.182333333333333 2.80695382553179 13.2726746255566 -0.0506666666666667 0.182333333333333 0.523967822735862 0.0470687361814606 -0.680922077960232 2.55888018358277 Q14004 CDK13 Q14004.2.S383.p_CDK13 Q14004-2_S383s _1_1_383_383 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.11190.11190.2 14.49 14.49 2.282 7 1 1 0 824.8348 1568.6976 S383s Hydrogen 379 (R) GGDVsPSPYSSSSWR (R) GGDVS(0.99)PS(0.0)PY(0.0)S(0.0)S(0.0)S(0.0)S(0.0)WR s:Phosphorylated S CDK13 159173.6 8 5 145.1 520.12 HUMAN 1 -2.807 13.2727 YERMVSRSLGANPDD-p Q96L93;S1172-p YERMVSRSLGANPDD 0.267416984120084 0.184522173394006 -0.238333333333333 0.183666666666667 10.8542688786086 9.64825046298963 -0.238333333333333 0.183666666666667 0.0821434827219732 0.108436365737285 -2.13059755686559 1.91991315267899 Q96L93 KIF16B Q96L93.S1172.p_KIF16B Q96L93_S1172s _1_1_1172_1172 Q96L93 Q96L93|Q96L93-4|A0A1B0GTU3|Q96L93-5|A0A0A0MRC9 Kinesin-like protein KIF16B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.17462.17462.3 14.75 14.75 99 1 1 1 0 674.3624 1941.1057 S1172s Hydrogen 1172 (R) sLGANPDDLKDPIK (I) S(1.0)LGANPDDLKDPIK K:TMT10-Lys-Only,s:Phosphorylated S KIF16B 152579.1 2 1 774.2 227.33 HUMAN 1 -10.8543 9.6483 YERRRSRSRSFDYNY-p O75494-3;S131-p YERRRSRSRSFDYNY 0.744474740122106 0.444152484386393 0.113666666666667 0.284333333333333 2.43238465192227 4.6928361866292 0.113666666666667 0.284333333333333 0.571164931659856 0.339403550638934 0.602561799999953 1.04725485567531 O75494 SRSF10 O75494.3.S131.p_SRSF10 O75494-3_S131sS133s_2_2_131_133 O75494-3 O75494-2|O75494-3|O75494-6|O75494-4|Q5JRI1|O75494-5 Isoform 3 of Serine/arginine-rich splicing factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8186.8186.2 10.48 10.48 10.479 4 2 2 0 684.2459 1207.5491 S131s S133s Hydrogen 131 (R) sRsFDYNYR (R) S(0.99)RS(0.99)FDY(0.0)NY(0.0)R s:Phosphorylated S SRSF10 22336.2 6 17 867.2 210.03 HUMAN 1 2.4324 4.6928 YERVRTYSGPMNKVV-p Q8WVV4-1;S56-p YERVRTYSGPMNKVV 0.0676893678697884 0.00292573679022132 -0.903333333333333 -0.716333333333333 25.2291984917587 38.2281645214447 -0.903333333333333 -0.716333333333333 0.00299971607778481 0.000150377738009197 -5.10206091218338 -9.36227926027539 Q8WVV4 POF1B Q8WVV4.1.S56.p_POF1B Q8WVV4-1_S56s _1_1_56_56 Q8WVV4-1 Q8WVV4-1|Q8WVV4-3 Isoform 1 of Protein POF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.8073.8073.2 9.5 9.5 2.286 3 1 1 0 603.7751 1126.5764 S56s Hydrogen 54 (R) TYsGPMNK (V) T(0.0)Y(0.0)S(0.99)GPMNK K:TMT10-Lys-Only,s:Phosphorylated S POF1B 69550.4 2 1 2520.1 80.14 HUMAN 1 -25.2292 -38.2282 YESLLVGSLPDMNKM-p P13807;S412-p YESLLVGSLPDMNKM 0.278066029924807 0.896696402653593 -0.182333333333333 0.0136666666666667 10.5184661507233 0.664568560360058 -0.182333333333333 0.0136666666666667 0.0887469394774997 0.858110357443896 -2.07194760667495 0.18746684256974 P13807 GYS1 P13807.S412.p_GYS1 P13807_S412s _1_1_412_412 P13807 P13807|P13807-2 Glycogen [starch] synthase, muscle HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.28298.28298.3 23.24 18 18.825 3 1 1 0 858.813 2494.4558 S412s TMT10 403 (R) KLYESLLVGsLPDMNK (M) KLY(0.0)ES(0.0)LLVGS(0.99)LPDMNK K:TMT10,s:Phosphorylated S GYS1 84582.8 10 1 1394.1 146.91 HUMAN 1 -10.5185 0.6646 YESYGMHSDDDANSD-p E3W994;S600-p YESYGMHSDDDANSD 0.377838045905345 0.0341377531447852 0.182 0.292666666666667 7.81220863143197 19.764535024871 0.182 0.292666666666667 0.165492812549919 0.0105571452669233 1.60256603388792 3.82507268055923 E3W994 NotFound E3W994.S600.p_NotFound E3W994_S600s _1_1_600_600 E3W994 O75122-3|E7EW49|E7ERI8|A0A0U1RQI6|J3KR49|E3W994 CLIP-associating protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.8475.8475.3 21.47 21.47 6.694 8 1 1 0 955.0266 2783.0994 S600s TMT10 593 (R) YESYGMHsDDDANSDASSACSER (S) Y(0.0)ES(0.0)Y(0.0)GMHS(0.99)DDDANS(0.0)DAS(0.0)S(0.0)ACS(0.0)ER C:Carbamidomethylation,s:Phosphorylated S CLASP2 139660.6 4 17 158.1 498.15 HUMAN 1 7.8122 19.7645 YEVDGRDYHFVISRE-p Q15700-2;Y831-p YEVDGRDYHFVISRE 0.724514999729113 0.0131824458012311 -0.0636666666666667 0.410333333333333 2.6496364750114 26.1776918548385 -0.0636666666666667 0.410333333333333 0.54329580601358 0.00241118656169111 -0.648304608089441 5.34128847765048 Q15700 DLG2 Q15700.2.Y831.p_DLG2 Q15700-2_Y831y _1_1_831_831 Q15700-2 Q15700-2|Q15700-4|E9PN83|B7Z2T4|E9PIW2|B7Z264|Q15700-3|B5MCC5|Q15700-5 Isoform 2 of Disks large homolog 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.13280.13318.4 21.6 21.6 21.6 3 1 1 0 584.7806 2256.1359 Y831y TMT10 822 (K) RDYEVDGRDyHFVISR (E) RDY(0.0)EVDGRDY(0.99)HFVIS(0.0)R y:Phosphorylated Y DLG2 110110.9 4 1 155.1 21.6 HUMAN 1 -2.6496 26.1777 YEVDGRDYHFVTSRE-p Q12959-2;Y782-p YEVDGRDYHFVTSRE 0.146674740935683 0.24782644049199 0.535333333333333 -0.129666666666667 16.9539188210271 7.98165843584079 0.535333333333333 -0.129666666666667 0.020165459286174 0.159160082802962 3.25356421765284 -1.63146280505756 Q12959 DLG1 Q12959.2.Y782.p_DLG1 Q12959-2_Y782y _1_1_782_782 Q12959-2 Q12959-2|Q12959-7|Q12959-4|A0A0C4DFT3|Q12959-6|Q12959-3|Q12959-5|Q12959-9|Q12959-8 Isoform 2 of Disks large homolog 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.10520.10576.4 26.48 20.08 10.613 4 1 1 0 581.772 2244.0995 Y782y TMT10 773 (K) RDYEVDGRDyHFVTSR (E) RDY(0.0)EVDGRDY(0.99)HFVT(0.0)S(0.0)R y:Phosphorylated Y DLG1 103604.4 5 1 59.1 38.72 HUMAN 1 16.9539 -7.9817 YEVLFPESPARAGTE-p O14686-3;S4825-p YEVLFPESPARAGTE 0.17928329733391 0.347068433118811 -0.265333333333333 -0.093 14.7395099375204 6.0928448314494 -0.265333333333333 -0.093 0.0335775501367461 0.245875647633339 -2.82973732242514 -1.30077233072535 O14686 KMT2D O14686.3.S4825.p_KMT2D O14686-3_S4825s _1_1_4825_4825 O14686-3 O14686-3 Isoform 3 of Histone-lysine N-methyltransferase 2D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.25165.25165.4 18.96 16.53 1.45 4 1 1 0 710.8709 2760.4973 S4825s TMT10 4814 (K) IPNSYEVLFPEsPARAGTEPK (K) IPNS(0.0)Y(0.0)EVLFPES(0.99)PARAGT(0.0)EPK K:TMT10,s:Phosphorylated S KMT2D 600227.3 9 43 17.1 1042.08 HUMAN 1 -14.7395 -6.0928 YEYDPDISPPRKKQA-p Q9BRD0;S325-p YEYDPDISPPRKKQA 0.833169919304162 0.738100378142649 -0.0323333333333333 0.0353333333333334 1.52752882629561 1.81861632912963 -0.0323333333333333 0.0353333333333334 0.703472488040977 0.657867401834496 -0.401427232801728 0.468195208152047 Q9BRD0 BUD13 Q9BRD0.S325.p_BUD13 Q9BRD0_S325s _1_1_325_325 Q9BRD0 Q9BRD0 BUD13 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.13921.13921.5 16 16 5.704 4 1 1 0 516.0734 2496.3702 S325s TMT10 315 (K) NSKYEYDPDIsPPRK (K) NS(0.0)KY(0.0)EY(0.0)DPDIS(0.99)PPRK K:TMT10,s:Phosphorylated S BUD13 70576.6 20 18 171.1 490.08 HUMAN 1 -1.5275 1.8186 YEYKKKYSDADIEPF-p Q14008-3;S1868-p YEYKKKYSDADIEPF 0.418379848008921 0.0276264135019995 0.124333333333333 0.585 6.98332534503447 21.1333638683025 0.124333333333333 0.585 0.200293781264257 0.00770306589801477 1.45809408571377 4.12237567857398 Q14008 CKAP5 Q14008.3.S1868.p_CKAP5 Q14008-3_S1868s _1_1_1868_1868 Q14008-3 Q14008-3|Q14008-2 Isoform 3 of Cytoskeleton-associated protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.22708.22708.3 15.73 11.08 12.899 2 1 1 0 731.733 2113.2148 S1868s TMT10 1866 (K) KYsDADIEPFLK (N) KY(0.0)S(0.99)DADIEPFLK K:TMT10,s:Phosphorylated S CKAP5 228079.2 4 8 1323.1 154.15 HUMAN 1 6.9833 21.1334 YEYSDQKSGKSKGKD-p Q9BRK3-2;S377-p YEYSDQKSGKSKGKD 0.762019271230933 0.0727841803049565 -0.079 -0.255333333333333 2.25955725740897 15.1206667193761 -0.079 -0.255333333333333 0.594352746965964 0.0307562461534182 -0.565545346339439 -2.89920255545673 Q9BRK3 MXRA8 Q9BRK3.2.S377.p_MXRA8 Q9BRK3-2_S377s _1_1_377_377 Q9BRK3-2 Q9BRK3-2 Isoform 2 of Matrix remodeling-associated protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.8086.8086.3 9.82 9.82 1.474 4 1 1 0 696.0223 2006.0798 S377s TMT10 368 (R) GGYEYSDQKsGK (S) GGY(0.0)EY(0.0)S(0.0)DQKS(0.99)GK K:TMT10,s:Phosphorylated S MXRA8 50018.5 1 2 4167.1 36.31 HUMAN 1 -2.2596 -15.1207 YFAKALESPERPFLA-p P00558;S203-p YFAKALESPERPFLA 0.487771326842487 0.0649016353444586 0.0933333333333333 0.217 5.74544606278271 15.805457922071 0.0933333333333333 0.217 0.266351651359844 0.0262696452353491 1.23908110096386 3.02881667204092 P00558 PGK1 P00558.S203.p_PGK1 P00558_S203s _1_1_203_203 P00558 P00558|P00558-2 Phosphoglycerate kinase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.31797.31797.3 19.62 19.62 99 1 1 1 0 769.7683 2227.3215 S203s TMT10 200 (K) ALEsPERPFLAILGGAK (V) ALES(1.0)PERPFLAILGGAK K:TMT10,s:Phosphorylated S PGK1 45013.3 9 2 2813.1 69.65 HUMAN 1 5.7454 15.8055 YFDRKRRSDPNFKNR-p Q15388;S30-p YFDRKRRSDPNFKNR 0.525094535747024 0.00278908336687029 -0.100333333333333 -0.884 5.17732148869696 38.6411937677439 -0.100333333333333 -0.884 0.303576291377743 0.000136735292255272 -1.13645612674341 -9.53667259222196 Q15388 TOMM20 Q15388.S30.p_TOMM20 Q15388_S30s _1_1_30_30 Q15388 Q15388 Mitochondrial import receptor subunit TOM20 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.4411.4411.4 10.65 10.65 99 1 1 1 0 479.5275 1835.1219 S30s TMT10 27 (R) KRRsDPNFK (N) KRRS(1.0)DPNFK K:TMT10,s:Phosphorylated S TOMM20 16468.7 1 1 5032.1 23.71 HUMAN 1 -5.1773 -38.6412 YFDRYRDSFDGRGPP-p Q9HCD5;S151-p YFDRYRDSFDGRGPP 0.739118396287836 0.792734698225711 0.0726666666666667 -0.036 2.48874150871179 1.40489990478034 0.0726666666666667 -0.036 0.563801009470481 0.72361907989857 0.614509381723695 -0.372532131963598 Q9HCD5 NCOA5 Q9HCD5.S151.p_NCOA5 Q9HCD5_S151s _1_1_151_151 Q9HCD5 Q9HCD5 Nuclear receptor coactivator 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.5865.5865.3 13.28 13.28 6.928 4 1 1 0 696.6366 2007.9267 S151s Hydrogen 148 (R) YRDsFDGRGPPGPESQSR (A) Y(0.0)RDS(0.99)FDGRGPPGPES(0.0)QS(0.0)R s:Phosphorylated S NCOA5 65763.5 4 11 426.1 319.02 HUMAN 1 2.4887 -1.4049 YFEDRRPSANCDPFS-p P15104;S343-p YFEDRRPSANCDPFS 0.301639765350884 0.0167577903853852 0.202333333333333 0.356666666666667 9.76348944642496 24.5142533311638 0.202333333333333 0.356666666666667 0.105596872408294 0.00353650817946184 1.94064823862916 4.91581403364848 P15104 GLUL P15104.S343.p_GLUL P15104_S343s_1_1_343_343 P15104 P15104 Glutamine synthetase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.25425.25425.4 10.8 2.89 3.224 4 1 1 0 753.3589 2929.4464 S343s N345n TMT10 335 (K) GYFEDRRPsAnCDPFSVTEALIR (T) GY(0.0)FEDRRPS(0.99)AN(1.0)CDPFS(0.0)VT(0.0)EALIR C:Carbamidomethylation,s:Phosphorylated S,n:Deamidated GLUL 42691.3 1 2 5499.1 18.75 HUMAN 1 9.7635 24.5143 YFEGKPASLDEGAMA-p A0A1W2PR28;S412-p YFEGKPASLDEGAMA 0.0983866986781605 0.497196154293014 -0.355666666666667 -0.130333333333333 21.3137632082532 4.05957494309594 -0.355666666666667 -0.130333333333333 0.00738964676739679 0.392683366605886 -4.16674374812207 -0.928341441685578 A0A1W2PR28 NotFound A0A1W2PR28.S412.p_NotFound A0A1W2PR28_S412s _1_1_412_412 A0A1W2PR28 Q5JU85-2|A0A1W2PR28|Q5JU85-3 IQ motif and SEC7 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17897.17897.3 20.12 20.12 11.166 2 1 1 0 963.8091 2809.4343 S412s TMT10 400 (K) AQNPAYFEGKPAsLDEGAMAGAR (S) AQNPAY(0.0)FEGKPAS(0.99)LDEGAMAGAR K:TMT10,s:Phosphorylated S IQSEC2 128893.2 2 3 1275.1 159.32 HUMAN 1 -21.3138 -4.0596 YFGFDDLSESEDDED-p Q7Z5K2-2;S502-p YFGFDDLSESEDDED 0.139915521739756 0.0428508307682174 0.305 0.259666666666667 17.4778564356807 18.3300738522985 0.305 0.259666666666667 0.0178736955617948 0.014689012985884 3.35735353555176 3.52642263092108 Q7Z5K2 WAPL Q7Z5K2.2.S502.p_WAPL Q7Z5K2-2_S502s _1_1_502_502 Q7Z5K2-2 Q7Z5K2-2 Isoform 2 of Wings apart-like protein homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.22993.22993.4 22.37 19.67 1.221 3 1 1 0 956.1907 3741.7681 S502s TMT10 493 (K) IKYFGFDDLsESEDDEDDDCQVERK (T) IKY(0.0)FGFDDLS(0.99)ES(0.0)EDDEDDDCQVERK K:TMT10,C:Carbamidomethylation,s:Phosphorylated S WAPL 138966.1 4 11 244.1 413.16 HUMAN 1 17.4779 18.3301 YFQSVSFSGKRRKVQ-p Q9NS73;S299-p YFQSVSFSGKRRKVQ 0.775630876182757 0.329928384714933 0.05 0.0966666666666667 2.11376653449524 6.37705269645657 0.05 0.0966666666666667 0.614643575483706 0.230300420193249 0.533851608189743 1.3511249605287 Q9NS73 MBIP Q9NS73.S299.p_MBIP Q9NS73_S299s _1_1_299_299 Q9NS73 Q9NS73|Q9NS73-5 MAP3K12-binding inhibitory protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.36481.36481.3 16.58 16.58 1.151 5 1 1 0 923.4822 2688.4537 S299s TMT10 282 (K) ILELEGISPEYFQSVSFsGK (R) ILELEGIS(0.0)PEY(0.0)FQS(0.0)VS(0.0)FS(0.99)GK K:TMT10,s:Phosphorylated S MBIP 39566 1 2 4339.1 33.23 HUMAN 1 2.1138 6.3771 YFRSLLDSDDSSDLL-p Q5TGY3;S846-p YFRSLLDSDDSSDLL 0.201344466647756 0.437712129959207 0.195666666666667 0.0843333333333333 13.5176835745071 4.78022558914428 0.195666666666667 0.0843333333333333 0.0444868486676745 0.332642274134798 2.60478259201369 1.06341799000299 Q5TGY3 AHDC1 Q5TGY3.S846.p_AHDC1 Q5TGY3_S846s _1_1_846_846 Q5TGY3 Q5TGY3 AT-hook DNA-binding motif-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33992.33992.3 13.49 13.49 2.361 7 1 1 0 969.1265 2825.4002 S846s TMT10 842 (R) SLLDsDDSSDLLDFALSASRPESR (K) S(0.0)LLDS(0.99)DDS(0.0)S(0.0)DLLDFALS(0.0)AS(0.0)RPES(0.0)R s:Phosphorylated S AHDC1 170057.9 1 7 334.1 355.89 HUMAN 1 13.5177 4.7802 YFTDKAASYTEEDEN-p Q14126;S782-p YFTDKAASYTEEDEN 0.235718859550154 0.17388209898627 -0.428333333333333 -0.162 12.0190940865428 9.99031049957589 -0.428333333333333 -0.162 0.0628189381860717 0.100223358065664 -2.33572178841492 -1.97922759452095 Q14126 DSG2 Q14126.S782.p_DSG2 Q14126_S782s _1_1_782_782 Q14126 Q14126 Desmoglein-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.6997.6997.2 17.12 17.12 1.133 4 1 1 0 1052.4851 2023.9973 S782s TMT10 780 (K) AAsYTEEDENHTAK (D) AAS(0.99)Y(0.0)T(0.0)EEDENHT(0.0)AK K:TMT10,s:Phosphorylated S DSG2 123090.5 5 6 494.1 293.66 HUMAN 1 -12.0191 -9.9903 YFTDRSLTPFMVNIP-p Q155Q3;T612-p YFTDRSLTPFMVNIP 0.346276230374682 0.160807050772026 -0.211666666666667 -0.154666666666667 8.55761151208485 10.4393602191603 -0.211666666666667 -0.154666666666667 0.13939232076584 0.090378260463449 -1.73178189277316 -2.05728307883579 Q155Q3 DIXDC1 Q155Q3.T612.p_DIXDC1 Q155Q3_T612t_1_1_612_612 Q155Q3 Q155Q3|Q155Q3-2 Dixin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.30452.30452.3 10.42 8.05 2.087 2 1 1 0 595.999 1705.0123 T612t N617n TMT10 610 (R) SLtPFMVnIPK (R) S(0.0)LT(0.99)PFMVN(1.0)IPK K:TMT10,t:Phosphorylated T,n:Deamidated DIXDC1 77933.1 1 3 3782.1 43.16 HUMAN 1 -8.5576 -10.4394 YGAFGPPSSFQPFPA-p Q96RK1;S71-p YGAFGPPSSFQPFPA 0.995222800843425 0.400422596323296 -0.001 -0.083 0.0387849624234697 5.2862746238986 -0.00100000000000001 -0.083 0.991109191443179 0.296055093690111 -0.0116672230848254 -1.15602504779643 Q96RK1 CITED4 Q96RK1.S71.p_CITED4 Q96RK1_Y64yS71sS72s_3_3_64_72 Q96RK1 Q96RK1 Cbp/p300-interacting transactivator 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.39721.39721.5 8.66 1.52 2.112 5 3 3 0 1172.5714 5619.0167 Y64y S71s S72s TMT10 46 (R) PRGAPLGPPPPRQPGALAyGAFGPPssFQPFPAVPPPAAGIAHLQPVATPYPGR (A) PRGAPLGPPPPRQPGALAY(0.99)GAFGPPS(0.99)S(0.99)FQPFPAVPPPAAGIAHLQPVAT(0.0)PY(0.0)PGR y:Phosphorylated Y,s:Phosphorylated S CITED4 18682.9 6 2 6925.1 8.66 HUMAN 1 -0.0388 -5.2863 YGAPPPPTPPASPPV-p E7EWN3;T70-p YGAPPPPTPPASPPV 0.783485670526388 0.707035176959296 0.064 0.0546666666666667 2.03782897856844 2.06847590222241 0.064 0.0546666666666667 0.625485292330344 0.621086958061377 0.51716333540712 0.523852083626456 E7EWN3 SETD5 E7EWN3.T70.p_SETD5 E7EWN3_T70tS74s_2_2_70_74 E7EWN3 E7EWN3 SET domain-containing protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.25435.25435.4 22.28 22.28 4.615 5 2 2 0 853.1676 3249.7258 T70t S74s TMT10 55 (R) GLPYADHNYGAPPPPtPPAsPPVQTIIPR (S) GLPY(0.0)ADHNY(0.0)GAPPPPT(0.99)PPAS(0.99)PPVQT(0.0)IIPR t:Phosphorylated T,s:Phosphorylated S SETD5 161030.5 1 14 773.1 227.48 HUMAN 1 2.0378 2.0685 YGARPVSSAASVYAG-p P05783;S31-p YGARPVSSAASVYAG 0.130972992482068 0.253059813917132 0.335 0.125 18.2632665007716 7.8602558793344 0.335 0.125 0.0149167204193294 0.163672008566788 3.51574263272885 1.61040797331711 P05783 KRT18 P05783.S31.p_KRT18 P05783_S31s _1_1_31_31 P05783 P05783|F8VZY9 Keratin, type I cytoskeletal 18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.8103.8103.2 11.42 11.42 1.16 6 1 1 0 830.8706 1580.7663 S31s Hydrogen 28 (R) PVSsAASVYAGAGGSGSR (I) PVS(0.0)S(0.99)AAS(0.0)VY(0.0)AGAGGS(0.0)GS(0.0)R s:Phosphorylated S KRT18 48057 9 7 89.1 623.62 HUMAN 1 18.2633 7.8603 YGDNAEKYKDLVPDN-p Q9Y224;Y99-p YGDNAEKYKDLVPDN 0.513314534436529 0.255670999258198 0.095 -0.130666666666667 5.3511464941979 7.80088082109415 0.095 -0.130666666666667 0.291665694396255 0.165925034987396 1.16803595747224 -1.60010473686489 Q9Y224 C14orf166 Q9Y224.Y99.p_C14orf166 Q9Y224_Y99yS107sT114t_3_3_99_114 Q9Y224 Q9Y224|G3V4C6 RNA transcription, translation and transport factor protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.13629.13629.5 8.08 3.45 1.124 4 3 3 0 608.497 2796.5913 Y99y N106n S107s N112n T114t TMT10 99 (K) yKDLVPDnsKTADnAtK (N) Y(0.99)KDLVPDN(1.0)S(0.99)KT(0.0)ADN(1.0)AT(0.99)K K:TMT10,y:Phosphorylated Y,n:Deamidated,s:Phosphorylated S,t:Phosphorylated T RTRAF 28181.7 1 2 5345.1 20.24 HUMAN 1 5.3511 -7.8009 YGEDDNKSPFPLQPK-p B4DJL6;S423-p YGEDDNKSPFPLQPK 0.0767901617046939 0.112331474930907 -0.378333333333333 0.191666666666667 23.8919511647752 12.5264832976854 -0.378333333333333 0.191666666666667 0.00408135980948472 0.0558922599473103 -4.76850597200403 2.42480862071867 B4DJL6 NotFound B4DJL6.S423.p_NotFound B4DJL6_S423s_1_1_423_423 B4DJL6 B4DJL6|Q96SY0|B4DVT3|H3BRY6|Q96SY0-3|Q96SY0-4 Integrator complex subunit 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.18802.18802.4 10.46 6.54 2.961 2 1 1 0 711.6127 2762.4604 N421n S423s TMT10 413 (K) ENPYGEDDnKsPFPLQPK (N) EN(0.0)PY(0.0)GEDDN(0.99)KS(0.99)PFPLQPK K:TMT10,n:Deamidated,s:Phosphorylated S INTS14 61971.9 1 2 4389.1 32.15 HUMAN 1 -23.892 12.5265 YGEGLRISDLRVDSQ-p Q9BTV7;S202-p YGEGLRISDLRVDSQ 0.669851136768797 0.206136847606035 -0.0833333333333333 -0.127 3.25872574141456 9.02465246216331 -0.0833333333333333 -0.127 0.472201569074575 0.125179944245173 -0.77248988526567 -1.81197674039703 Q9BTV7 CABLES2 Q9BTV7.S202.p_CABLES2 Q9BTV7_S202s _1_1_202_202 Q9BTV7 Q9BTV7 CDK5 and ABL1 enzyme substrate 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.32619.32619.3 13.87 4.58 3.386 4 1 1 0 878.4515 2553.3697 S202s TMT10 185 (R) SLCAAFSVLPYGEGLRIsDLR (V) S(0.0)LCAAFS(0.0)VLPY(0.0)GEGLRIS(0.99)DLR C:Carbamidomethylation,s:Phosphorylated S CABLES2 52690.7 1 3 2299.1 89.16 HUMAN 1 -3.2587 -9.0247 YGENGSKSMSDVSAE-p Q8WWI1-3;S370-p YGENGSKSMSDVSAE 0.501204691561592 0.416744779097294 -0.0893333333333333 0.113666666666667 5.53119367963837 5.05617152681899 -0.0893333333333334 0.113666666666667 0.279821211163527 0.312164021764209 -1.2005731374562 1.11411461996547 Q8WWI1 LMO7 Q8WWI1.3.S370.p_LMO7 Q8WWI1-3_S370s _1_1_370_370 Q8WWI1-3 Q8WWI1|Q8WWI1-2|J3KP06|F8WD26|Q8WWI1-4|E9PMT2|Q8WWI1-5|A0A0A0MTE2|Q8WWI1-3|E9PMS6 Isoform 3 of LIM domain only protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.16291.16291.3 20.06 16.23 1.128 3 1 1 0 620.6183 1779.8744 S370s TMT10 370 (K) sMSDVSAEDVQNLR (Q) S(0.99)MS(0.0)DVS(0.0)AEDVQNLR s:Phosphorylated S LMO7 154694.3 4 8 61.1 704.74 HUMAN 1 -5.5312 5.0562 YGFVDFDSPAAAQKA-p P29558;S112-p YGFVDFDSPAAAQKA 0.570381806910906 0.0490550526697937 0.0806666666666667 0.295333333333333 4.4873629104366 17.5128212828669 0.0806666666666667 0.295333333333333 0.35584732785918 0.0177303729841924 1.00921632049559 3.36167327353494 P29558 RBMS1 P29558.S112.p_RBMS1 P29558_S112s _1_1_112_112 P29558 Q6XE24-5|Q6XE24-4|Q6XE24-3|P29558|P29558-2|F6Y5H0|E7ETU5|C9J9B2 RNA-binding motif, single-stranded-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24383.24383.2 17.41 17.41 11.44 2 1 1 0 1056.0149 2031.0588 S112s TMT10 104 (K) GYGFVDFDsPAAAQK (A) GY(0.0)GFVDFDS(0.99)PAAAQK K:TMT10,s:Phosphorylated S RBMS1 44732.7 2 2 3727.1 44.43 HUMAN 1 4.4874 17.5128 YGFVDFDSPSAAQKA-p Q15434;S106-p YGFVDFDSPSAAQKA 0.760018029304591 0.0288857065811103 0.0466666666666667 0.317666666666667 2.28565900056664 20.8423534771963 0.0466666666666667 0.317666666666667 0.59079131181088 0.00823691628839185 0.571173454045193 4.05810298350902 Q15434 RBMS2 Q15434.S106.p_RBMS2 Q15434_S106s _1_1_106_106 Q15434 Q15434|F8W1T6 RNA-binding motif, single-stranded-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.23411.23411.2 15.01 15.01 2 3 1 1 0 1064.0146 2047.0537 S106s TMT10 98 (K) GYGFVDFDsPSAAQK (A) GY(0.0)GFVDFDS(0.99)PS(0.0)AAQK K:TMT10,s:Phosphorylated S RBMS2 44186.1 3 2 2184.1 94.14 HUMAN 1 2.2857 20.8424 YGGISTASVDFEQPT-p A0A0A0MR66;S910-p YGGISTASVDFEQPT 0.714570848433642 0.255662392403729 0.0583333333333333 -0.112 2.75057742365358 7.8025059178081 0.0583333333333333 -0.112 0.530813864274192 0.165862958724114 0.669279892300075 -1.60038679109034 A0A0A0MR66 RBM10 A0A0A0MR66.S910.p_RBM10 A0A0A0MR66_S910s _1_1_910_910 A0A0A0MR66 A0A0A0MR66|P98175|P98175-2|P98175-3|P98175-4 RNA binding motif protein 10, isoform CRA_d HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.18650.18650.3 12.06 12.06 1.287 5 1 1 0 679.6545 1956.9864 S910s TMT10 903 (K) YGGISTAsVDFEQPTR (D) Y(0.0)GGIS(0.0)T(0.0)AS(0.99)VDFEQPT(0.0)R s:Phosphorylated S RBM10 110706.4 1 15 270.1 394.36 HUMAN 1 2.7506 -7.8025 YGHFGRDSFPWEVPK-p P31153;S384-p YGHFGRDSFPWEVPK 0.582581515908799 0.669932805571312 -0.0833333333333333 -0.0456666666666666 4.31707956022479 2.37747712512439 -0.0833333333333333 -0.0456666666666666 0.370076956635474 0.578431968711921 -0.977274856376518 -0.590790692266007 P31153 MAT2A P31153.S384.p_MAT2A P31153_S384s _1_1_384_384 P31153 P31153 S-adenosylmethionine synthase isoform type-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19697.19697.5 21.34 21.34 8.712 3 1 1 0 592.9168 2880.5764 S384s TMT10 374 (R) TAAYGHFGRDsFPWEVPKK (L) T(0.0)AAY(0.0)GHFGRDS(0.99)FPWEVPKK K:TMT10,s:Phosphorylated S MAT2A 44002.2 4 2 3178.1 58.56 HUMAN 1 -4.3171 -2.3775 YGITSPISLAAPKET-p P51003;S27-p YGITSPISLAAPKET 0.201981395426902 0.0386105614447203 -0.369 -0.383 13.4932208087075 18.9838607574946 -0.369 -0.383 0.0447381394747585 0.0126361253152974 -2.60033411575481 -3.66098386378766 P51003 PAPOLA P51003.S27.p_PAPOLA P51003_S27s _1_1_27_27 P51003 P51003|G3XAH6 Poly(A) polymerase alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20416.20416.4 8.53 8.53 1.563 4 1 1 0 499.0298 1913.1261 S27s TMT10 19 (K) HYGITSPIsLAAPK (E) HY(0.0)GIT(0.0)S(0.0)PIS(0.99)LAAPK K:TMT10,s:Phosphorylated S PAPOLA 83297.5 1 2 1658.1 123.25 HUMAN 1 -13.4932 -18.9839 YGKSLYYYIQQDTKG-p P07355-2;Y336-p YGKSLYYYIQQDTKG 0.471197106492102 0.0149978055507792 -0.109333333333333 0.598666666666667 6.03066047816284 25.2428180796235 -0.109333333333333 0.598666666666667 0.249421537603447 0.00299032362536032 -1.29002367313528 5.09909414993535 P07355 ANXA2 P07355.2.Y336.p_ANXA2 P07355-2_Y336y _1_1_336_336 P07355-2 P07355-2|A6NMY6 Isoform 2 of Annexin A2 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.26137.26137.3 20.92 20.92 1.126 6 1 1 0 927.4762 2700.4488 Y336y TMT10 332 (K) SLYYyIQQDTKGDYQK (A) S(0.0)LY(0.0)Y(0.0)Y(0.99)IQQDT(0.0)KGDY(0.0)QK K:TMT10,y:Phosphorylated Y ANXA2 40695.7 2 6 8.1 109.57 HUMAN 1 -6.0307 25.2428 YGLEEYDTQDGIAIN-p Q9BXW9;T691-p YGLEEYDTQDGIAIN 0.453059514947596 0.0799915353929682 0.115 0.195333333333333 6.34546238409973 14.5563464390534 0.115 0.195333333333333 0.231981718641832 0.0350239686990477 1.34587969833358 2.79389293128486 Q9BXW9 FANCD2 Q9BXW9.T691.p_FANCD2 Q9BXW9_T691t _1_1_691_691 Q9BXW9 Q9BXW9-1|Q9BXW9-3 Fanconi anemia group D2 protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.37623.37623.3 23.41 23.41 6.075 4 1 1 0 1265.9901 3715.9875 T691t TMT10 682 (K) ALYGLEEYDtQDGIAINLLPLLFSQDFAK (D) ALY(0.0)GLEEY(0.0)DT(0.99)QDGIAINLLPLLFS(0.0)QDFAK K:TMT10,t:Phosphorylated T FANCD2 165894.1 3 5 960.1 194.41 HUMAN 1 6.3455 14.5563 YGMSPCNTAVVPQGW-p E7EVA0;T200-p YGMSPCNTAVVPQGW 0.141942273574901 0.115747127817729 -0.459 -0.227 17.3299509040224 12.3534779498741 -0.459 -0.227 0.0184928952464637 0.0581637240083934 -3.32790664788441 -2.39395712487922 E7EVA0 NotFound E7EVA0.T200.p_NotFound E7EVA0_T200t_1_1_200_200 E7EVA0 E7EVA0|P27816|P27816-6|P27816-2|P27816-5 Microtubule-associated protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.33601.33601.5 23.96 19.11 1.118 10 1 1 0 1184.181 5835.8926 T200t N213n TMT10 191 (K) DSYGMSPCNtAVVPQGWSVEALnSPHSESFVSPEAVAEPPQPTAVPLELAK (E) DS(0.0)Y(0.0)GMS(0.0)PCN(0.0)T(0.99)AVVPQGWS(0.0)VEALN(0.99)S(0.0)PHS(0.0)ES(0.0)FVS(0.0)PEAVAEPPQPT(0.0)AVPLELAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T,n:Deamidated MAP4 246695.2 7 5 38.1 865.62 HUMAN 1 -17.33 -12.3535 YGNSALLSLPGYRPT-p Q14980;S1872-p YGNSALLSLPGYRPT 0.873297597831293 0.311254794812456 0.0263333333333333 0.0976666666666667 1.15098272560328 6.69925186842899 0.0263333333333333 0.0976666666666667 0.767187869732617 0.213833041440094 0.31133353864457 1.40788682457799 Q14980 NUMA1 Q14980.S1872.p_NUMA1 Q14980_S1872s _1_1_1872_1872 Q14980 Q14980|Q14980-2|A0A087WY61|Q14980-5 Nuclear mitotic apparatus protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.23826.23826.3 9.37 9.37 2.492 7 1 1 0 882.1151 2564.367 S1872s TMT10 1860 (R) LGSPDYGNSALLsLPGYRPTTR (S) LGS(0.0)PDY(0.0)GNS(0.0)ALLS(0.99)LPGY(0.0)RPT(0.0)T(0.0)R s:Phosphorylated S NUMA1 239339.3 1 28 31.1 900.97 HUMAN 1 1.151 6.6993 YGNSPYWTN______-p Q5T6F2;T1118-p YGNSPYWTN______ 0.681222809414458 0.853676467447868 0.0613333333333333 0.0263333333333333 3.12921600883723 0.967583078676798 0.0613333333333333 0.0263333333333333 0.486495020155727 0.8002795000096 0.74653752249063 0.265701043207838 Q5T6F2 UBAP2 Q5T6F2.T1118.p_UBAP2 Q5T6F2_T1118t _1_1_1118_1118 Q5T6F2 Q5T6F2|Q5T6F2-2 Ubiquitin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.14564.14564.2 14.41 14.41 14.406 6 1 1 0 1155.0516 2229.1341 T1118t TMT10 1104 (K) SQASKPAYGNSPYWtN (-) S(0.0)QAS(0.0)KPAY(0.0)GNS(0.0)PY(0.0)WT(0.99)N K:TMT10,t:Phosphorylated T UBAP2 117683.9 3 7 2109.1 97.32 HUMAN 1 3.1292 0.9676 YGPGLEKSGCIVNNL-p O75369-8;S658-p YGPGLEKSGCIVNNL 0.206225387401774 0.0181953731513413 -0.297333333333333 0.372 13.2608509771542 23.9518975860517 -0.297333333333333 0.372 0.0471970552059653 0.00402541111459198 -2.55817884808302 4.77748952576583 O75369 FLNB O75369.8.S658.p_FLNB O75369-8_S658s _1_1_658_658 O75369-8 O75369-8|O75369-9|O75369-2|O75369-3|O75369-6|O75369-7|E7EN95|O75369-4|O75369-5 Isoform 8 of Filamin-B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.29170.29170.4 14.22 11.75 9.176 2 1 1 0 576.2949 2222.1891 S658s TMT10 658 (K) sGCIVNNLAEFTVDPK (D) S(0.99)GCIVNNLAEFT(0.0)VDPK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S FLNB 283797.6 1 10 67.1 680.07 HUMAN 1 -13.2609 23.9519 YGPGRPLSPRRAFEG-p A7MCY6;S504-p YGPGRPLSPRRAFEG 0.434135403741661 0.0101099102642081 -0.123333333333333 -0.430333333333333 6.67796146499803 28.0236798561697 -0.123333333333333 -0.430333333333333 0.214883888099229 0.00157627509712582 -1.40451575134589 -5.84417409052518 A7MCY6 TBKBP1 A7MCY6.S504.p_TBKBP1 A7MCY6_S504s _1_1_504_504 A7MCY6 A7MCY6 TANK-binding kinase 1-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.14691.14691.2 8.41 8.41 5.168 4 1 1 0 1015.0081 1949.0442 S504s TMT10 491 (R) AYGSELYGPGRPLsPR (R) AY(0.0)GS(0.0)ELY(0.0)GPGRPLS(0.99)PR s:Phosphorylated S TBKBP1 68613.7 2 3 2261.1 90.94 HUMAN 1 -6.678 -28.0237 YGPMKGGSFGGRSSG-p P51991;S350-p YGPMKGGSFGGRSSG 0.515588058235474 0.988520181148994 0.0973333333333333 0.00166666666666669 5.31291253473491 0.076390429959931 0.0973333333333333 0.00166666666666669 0.294244766091025 0.982564246509432 1.16110430798419 0.0228802394142195 P51991 HNRNPA3 P51991.S350.p_HNRNPA3 P51991_S350s _1_1_350_350 P51991 P51991|P51991-2 Heterogeneous nuclear ribonucleoprotein A3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.4983.4983.2 11.01 3.04 99 1 1 1 0 473.7212 866.4682 S350s TMT10 348 (K) GGsFGGR (S) GGS(1.0)FGGR s:Phosphorylated S HNRNPA3 39822.5 3 2 2139.1 96.03 HUMAN 1 5.3129 0.0764 YGQDYDLSPSRSHTS-p Q9NYV4-2;S249-p YGQDYDLSPSRSHTS 0.617306864410826 0.776581404979675 0.067 -0.035 3.88982253103361 1.51893044560007 0.067 -0.035 0.408336072130708 0.704866637921125 0.896009650609255 -0.399375661623603 Q9NYV4 CDK12 Q9NYV4.2.S249.p_CDK12 Q9NYV4-2_S249s _1_1_249_249 Q9NYV4-2 Q9NYV4|Q9NYV4-2 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13786.13786.4 22.07 22.07 1.367 10 1 1 0 933.4435 3650.7814 S249s TMT10 226 (R) KWSDSSKQDDSPSGASYGQDYDLsPSR (S) KWS(0.0)DS(0.0)S(0.0)KQDDS(0.0)PS(0.0)GAS(0.0)Y(0.0)GQDY(0.0)DLS(0.99)PS(0.0)R K:TMT10,s:Phosphorylated S CDK12 163853.1 4 7 59.1 708.76 HUMAN 1 3.8898 -1.5189 YGRALQASALKAWGG-p P04075;S309-p YGRALQASALKAWGG 0.588586350860677 0.291681226145483 -0.103 -0.147333333333333 4.23969474807954 7.06312205906996 -0.103 -0.147333333333333 0.376730277238664 0.196647212266712 -0.962679050090954 -1.47164767013026 P04075 ALDOA P04075.S309.p_ALDOA P04075_S309s _1_1_309_309 P04075 P04075-2|J3KPS3|H3BQN4|P00883 Fructose-bisphosphate aldolase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15938.15938.2 11.11 3.36 99 1 1 1 0 670.3915 1259.8087 S309s TMT10 305 (R) ALQAsALK (A) ALQAS(1.0)ALK K:TMT10,s:Phosphorylated S ALDOA 39875.7 1 9 1050.1 183.91 HUMAN 1 -4.2397 -7.0631 YGRKLGGSQEDQIKN-p P37837;S75-p YGRKLGGSQEDQIKN 0.513458021750611 0.0201264196371064 0.0913333333333333 0.367666666666667 5.34733712591873 23.2373132621642 0.0913333333333333 0.367666666666667 0.291921638119087 0.00474535463106868 1.16734569433607 4.60552613018046 P37837 TALDO1 P37837.S75.p_TALDO1 P37837_S75s _1_1_75_75 P37837 P37837 Transaldolase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.11961.11961.3 8.8 8.8 99 1 1 1 0 657.3706 1890.1263 S75s TMT10 71 (R) KLGGsQEDQIK (N) KLGGS(1.0)QEDQIK K:TMT10,s:Phosphorylated S TALDO1 37710.6 1 2 2744.1 72.02 HUMAN 1 5.3473 23.2373 YGRNADHSMNYQYR_-p Q12906-7;S892-p YGRNADHSMNYQYR_ 0.197192261302184 0.927601724721068 -0.614666666666667 0.034 13.7434587977351 0.460303265825036 -0.614666666666667 0.034 0.0422332127547579 0.899434772223567 -2.64593673598026 0.13241048519717 Q12906 ILF3 Q12906.7.S892.p_ILF3 Q12906-7_S892s _1_1_892_892 Q12906-7 Q12906-7 Isoform 7 of Interleukin enhancer-binding factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5996.5996.3 12.79 12.79 12.785 3 1 1 0 569.9103 1627.7485 S892s TMT10 888 (R) NADHsMNYQYR (-) NADHS(0.99)MNY(0.0)QY(0.0)R s:Phosphorylated S ILF3 96205.6 1 19 130.1 537.24 HUMAN 1 -13.7435 0.4603 YGRRPQYSNPPVQGE-p P67809;S209-p YGRRPQYSNPPVQGE 0.156870667579318 0.0420361806204987 -0.296666666666667 -0.328666666666667 16.1420730928847 18.4462468664332 -0.296666666666667 -0.328666666666667 0.0243104328016974 0.0143012932944599 -3.0955175351797 -3.55014913537971 P67809 YBX1 P67809.S209.p_YBX1 P67809_S209s _1_1_209_209 P67809 P67809 Nuclease-sensitive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10683.10683.4 22.62 22.16 8.589 2 1 1 0 883.9224 3452.6927 S209s TMT10 205 (R) RPQYsNPPVQGEVMEGADNQGAGEQGRPVR (Q) RPQY(0.0)S(0.99)NPPVQGEVMEGADNQGAGEQGRPVR s:Phosphorylated S YBX1 35923.5 1 15 929.2 199.34 HUMAN 1 -16.1421 -18.4462 YGRRRSSSPFLSKRS-p Q9NYV4-2;S334-p YGRRRSSSPFLSKRS 0.653540622885547 0.0295567384305579 -0.084 0.646 3.46456995171788 20.6991033995966 -0.084 0.646 0.450342573026992 0.00851313773681348 -0.81329043034838 4.02668066856848 Q9NYV4 CDK12 Q9NYV4.2.S334.p_CDK12 Q9NYV4-2_S334s _1_1_334_334 Q9NYV4-2 Q9NYV4|Q9NYV4-2|Q9NYV4-3 Isoform 2 of Cyclin-dependent kinase 12 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.16037.16037.2 10.29 10.29 1.359 4 1 1 0 695.8727 1310.772 S334s TMT10 332 (R) SSsPFLSK (R) S(0.0)S(0.0)S(0.99)PFLS(0.0)K K:TMT10,s:Phosphorylated S CDK12 163853.1 2 15 59.1 708.76 HUMAN 1 -3.4646 20.6991 YGSDKRLSEGRGLPP-p Q14151;S832-p YGSDKRLSEGRGLPP 0.533414361833547 0.55231070916662 0.0873333333333333 0.066 5.05276807193943 3.47249997489058 0.0873333333333333 0.066 0.312408752613481 0.449521017902184 1.11371940939344 0.814726648565135 Q14151 SAFB2 Q14151.S832.p_SAFB2 Q14151_S832s _1_1_832_832 Q14151 Q14151 Scaffold attachment factor B2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.7863.7863.3 11.84 8.25 99 1 1 1 0 580.9871 1660.9808 S832s TMT10 830 (K) RLsEGRGLPPPPR (G) RLS(1.0)EGRGLPPPPR s:Phosphorylated S SAFB2 107985.1 9 11 83.3 629.62 HUMAN 1 5.0528 3.4725 YGSDKRMSEGRGLPP-p Q15424;S808-p YGSDKRMSEGRGLPP 0.998180995519267 0.235298364744548 -0.000666666666666677 0.242333333333333 0.0143287666688366 8.27587606343482 -0.000666666666666675 0.242333333333333 0.996706116323595 0.148734731453866 -0.00432239477672647 1.68243420395865 Q15424 SAFB Q15424.S808.p_SAFB Q15424_S808s _1_1_808_808 Q15424 Q15424-3|Q15424-4|Q15424-2 Scaffold attachment factor B1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.6880.6880.3 12.86 12.86 99 1 1 1 0 586.9729 1678.9373 S808s TMT10 806 (K) RMsEGRGLPPPPR (R) RMS(1.0)EGRGLPPPPR s:Phosphorylated S SAFB 103096.3 5 40 83.1 629.62 HUMAN 1 -0.0143 8.2759 YGSVKAYTNFDAERD-p P07355;T31-p YGSVKAYTNFDAERD 0.643225927788262 0.0223075600376738 -0.074 0.343666666666667 3.58218543603948 22.5587303810596 -0.074 0.343666666666667 0.438310077956915 0.00554787876254269 -0.836371048197918 4.44602338486316 P07355 ANXA2 P07355.T31.p_ANXA2 P07355_T31t _1_1_31_31 P07355 P07355-2|A6NMY6|H0YMU9|H0YLV6|H0YKN4 Annexin A2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.26111.26111.3 15.78 15.78 6.007 3 1 1 0 898.4594 2613.3925 T31t TMT10 29 (K) AYtNFDAERDALNIETAIK (T) AY(0.0)T(0.99)NFDAERDALNIET(0.0)AIK K:TMT10,t:Phosphorylated T ANXA2 38831.6 3 5 537.1 277.57 HUMAN 1 -3.5822 22.5587 YGTHFIMSPPTKSKL-p Q96JH8;S10-p YGTHFIMSPPTKSKL 0.791417276987856 0.501290590822245 0.038 0.0656666666666667 1.9620509219665 4.01437815833807 0.038 0.0656666666666667 0.636494870163655 0.396791339168063 0.500381447420715 0.919720817089559 Q96JH8 RADIL Q96JH8.S10.p_RADIL Q96JH8_S10s _1_1_10_10 Q96JH8 Q96JH8|Q96JH8-1|F8WEM1 Ras-associating and dilute domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32173.32173.3 13.4 13.4 4.081 4 1 1 0 669.9829 1927.9648 S10s Acetyl 1 (-) MFYGTHFIMsPPTK (S) MFY(0.0)GT(0.0)HFIMS(0.99)PPT(0.0)K K:TMT10,s:Phosphorylated S RADIL 118765.4 2 1 1785.1 114.97 HUMAN 1 1.9621 4.0144 YGYGYGRSRDYNGRN-p P98179;S132-p YGYGYGRSRDYNGRN 0.44457492801222 0.0881741554028082 -0.155333333333333 -0.213333333333333 6.48733596547577 13.9609927096528 -0.155333333333333 -0.213333333333333 0.224525878049447 0.0401698980063482 -1.37094060195851 -2.68415474353942 P98179 RBM3 P98179.S132.p_RBM3 P98179_S132s _1_1_132_132 P98179 P98179 RNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8965.8965.4 11.83 6.93 2.569 7 1 1 0 571.5106 2203.0518 S132s TMT10 117 (R) YYDSRPGGYGYGYGRsR (D) Y(0.0)Y(0.0)DS(0.0)RPGGY(0.0)GY(0.0)GY(0.0)GRS(0.99)R s:Phosphorylated S RBM3 17170.1 1 2 4635.1 28.57 HUMAN 1 -6.4873 -13.961 YHCAIPGSKKTILMV-p Q709C8;S3641-p YHCAIPGSKKTILMV 0.814399806622497 0.0444539202864225 0.047 0.264666666666667 1.7116446746234 18.1009331061669 0.047 0.264666666666667 0.674272632075473 0.0154848388268071 0.443952483725515 3.47985203436289 Q709C8 VPS13C Q709C8.S3641.p_VPS13C Q709C8_S3641s _1_1_3641_3641 Q709C8 Q709C8|Q709C8-3 Vacuolar protein sorting-associated protein 13C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.8414.8414.3 15.03 15.03 8.625 2 1 1 0 643.3522 1848.0769 S3641s TMT10 3634 (R) YHCAIPGsKK (T) Y(0.0)HCAIPGS(0.99)KK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S VPS13C 424721.6 8 6 1924.1 106.81 HUMAN 1 1.7116 18.1009 YHELLEASLLREAVS-p Q9Y6J0;S66-p YHELLEASLLREAVS 0.306383440584975 0.93212497171739 -0.226333333333333 -0.0103333333333333 9.62251448675656 0.430479556773211 -0.226333333333333 -0.0103333333333333 0.109080859507128 0.90563259358944 -1.91619626775824 -0.124198597835569 Q9Y6J0 CABIN1 Q9Y6J0.S66.p_CABIN1 Q9Y6J0_S66s _1_1_66_66 Q9Y6J0 Q9Y6J0|A0A087WWW8|Q9Y6J0-2 Calcineurin-binding protein cabin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.26062.26062.4 17.97 13.85 1.128 4 1 1 0 714.6207 2775.4929 S66s TMT10 58 (K) AYHELLEAsLLREAVSSGDEK (E) AY(0.0)HELLEAS(0.99)LLREAVS(0.0)S(0.0)GDEK K:TMT10,s:Phosphorylated S CABIN1 248858 2 3 763.1 229.21 HUMAN 1 -9.6225 -0.4305 YHESEEESEEEEAA_-p Q8N9N8;S159-p YHESEEESEEEEAA_ 0.144175666768838 0.575592774769726 -0.343666666666667 -0.0713333333333333 17.1701591999998 3.23488187356957 -0.343666666666667 -0.0713333333333333 0.0191859840902266 0.474801205176318 -3.29622460300932 -0.767616045000226 Q8N9N8 EIF1AD Q8N9N8.S159.p_EIF1AD Q8N9N8_S159s _1_1_159_159 Q8N9N8 Q8N9N8|E9PNH5 Probable RNA-binding protein EIF1AD HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.5470.5470.3 16.5 16.5 9.707 3 1 1 0 702.2751 2024.8406 S159s TMT10 151 (R) QYHESEEEsEEEEAA (-) QY(0.0)HES(0.0)EEES(0.99)EEEEAA s:Phosphorylated S EIF1AD 19109.8 4 3 4527.1 30.32 HUMAN 1 -17.1702 -3.2349 YHIHRRKSFDASDTL-p Q5JXC2;S303-p YHIHRRKSFDASDTL 0.806340238065947 0.00892195721093726 -0.0526666666666667 -0.457 1.8010825314838 29.0380704888061 -0.0526666666666667 -0.457 0.66052878270398 0.00124793783286696 -0.464285386858556 -6.13539320001069 Q5JXC2 MIIP Q5JXC2.S303.p_MIIP Q5JXC2_S303s _1_1_303_303 Q5JXC2 Q5JXC2 Migration and invasion-inhibitory protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21684.21684.3 15.77 11.7 3.044 3 1 1 0 534.5977 1521.811 S303s TMT10 303 (K) sFDASDTLALPR (H) S(0.99)FDAS(0.0)DT(0.0)LALPR s:Phosphorylated S MIIP 43393.9 3 3 3185.1 58.28 HUMAN 1 -1.8011 -29.0381 YHKEARNSWDSPAFS-p A0A087WWK8;S498-p YHKEARNSWDSPAFS 0.0502987961976786 0.950561945305192 -0.506333333333333 0.00733333333333336 28.6380528120211 0.315750903947447 -0.506333333333333 0.00733333333333337 0.00136834219333711 0.92987572345954 -6.02821501950054 0.0921660100206514 A0A087WWK8 IQSEC1 A0A087WWK8.S498.p_IQSEC1 A0A087WWK8_S498s _1_1_498_498 A0A087WWK8 A0A087WWK8|Q6DN90|Q6DN90-2|A0A0C4DGT3 IQ motif and SEC7 domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.17269.17269.4 17.74 17.74 4.358 3 1 1 0 658.3351 2550.3465 S498s TMT10 494 (K) EARNsWDSPAFSNDVIRK (R) EARNS(0.99)WDS(0.0)PAFS(0.0)NDVIRK K:TMT10,s:Phosphorylated S IQSEC1 125330.2 9 8 768.1 228.42 HUMAN 1 -28.6381 0.3158 YHKKPPGTPPPSALP-p Q9BQQ3;T216-p YHKKPPGTPPPSALP 0.219716131376416 0.0957805260467767 0.204333333333333 0.321666666666667 12.6705318473985 13.4710738356656 0.204333333333333 0.321666666666667 0.054068810493394 0.044966865616456 2.45186454519415 2.59482271201189 Q9BQQ3 GORASP1 Q9BQQ3.T216.p_GORASP1 Q9BQQ3_T216t _1_1_216_216 Q9BQQ3 Q9BQQ3|B4E1H8|B3KPY8|Q9BQQ3-3 Golgi reassembly-stacking protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.24904.24904.5 27.95 27.95 1.196 7 1 1 0 847.4438 4153.2221 T216t TMT10 212 (K) KPPGtPPPSALPLGAPPPDALPPGPTPEDSPSLETGSR (Q) KPPGT(0.99)PPPS(0.0)ALPLGAPPPDALPPGPT(0.0)PEDS(0.0)PS(0.0)LET(0.0)GS(0.0)R K:TMT10,t:Phosphorylated T GORASP1 46709.8 5 1 2976.1 64.26 HUMAN 1 12.6705 13.4711 YHLKRNQSFCPTVNL-p P46776;S68-p YHLKRNQSFCPTVNL 0.110073096853557 0.0207694246767137 0.348333333333333 0.424666666666667 20.0513123608609 23.0138339246435 0.348333333333333 0.424666666666667 0.00988254416582995 0.00499593302390467 3.88997121461659 4.55259567735555 P46776 RPL27A P46776.S68.p_RPL27A P46776_S68s _1_1_68_68 P46776 P46776|E9PLL6|E9PJD9 60S ribosomal protein L27a HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.17097.17097.2 15.78 15.78 8.126 2 1 1 0 866.4016 1651.8311 S68s Hydrogen 66 (R) NQsFCPTVNLDK (L) NQS(0.99)FCPT(0.0)VNLDK C:Carbamidomethylation,K:TMT10-Lys-Only,s:Phosphorylated S RPL27A 16675.2 7 1 4487.1 30.78 HUMAN 1 20.0513 23.0138 YHLPDAESDEDEDFK-p Q15019-2;S253-p YHLPDAESDEDEDFK 0.481338855387188 0.0645894485673786 0.104333333333333 0.218666666666667 5.84429050679844 15.8353383366796 0.104333333333333 0.218666666666667 0.260358013531044 0.0260895246491729 1.25677513256737 3.03452008888851 Q15019 SEPT2 Q15019.2.S253.p_SEPT2 Q15019-2_S253s _1_1_253_253 Q15019-2 Q15019-2|Q15019-3|B5MCX3 Isoform 2 of Septin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20363.20783.3 25.46 25.46 14.12 2 1 1 0 821.0462 2381.1549 S253s TMT10 245 (K) IYHLPDAEsDEDEDFK (E) IY(0.0)HLPDAES(0.99)DEDEDFK K:TMT10,s:Phosphorylated S SEPT2 45745.4 43 2 2580.1 77.8 HUMAN 1 5.8443 15.8353 YHPTPPLSPELPGSC-p B2RTY4-5;S1575-p YHPTPPLSPELPGSC 0.367523416772894 0.405994159531965 0.159333333333333 -0.173333333333333 8.06939370355144 5.21186372854701 0.159333333333333 -0.173333333333333 0.155977023922198 0.301171330211714 1.64719646989066 -1.14250601775916 B2RTY4 MYO9A B2RTY4.5.S1575.p_MYO9A B2RTY4-5_S1575s _1_1_1575_1575 B2RTY4-5 H3BRD5|B2RTY4-5 Isoform 5 of Unconventional myosin-IXa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.29207.29207.5 36.88 31.67 2.456 9 1 1 0 1099.3608 5412.7979 S1575s TMT10 1538 (R) VKPTTQSEVSPLFAGTDVIPAHQFPDELAAYHPTPPLsPELPGSCR (K) VKPT(0.0)T(0.0)QS(0.0)EVS(0.0)PLFAGT(0.0)DVIPAHQFPDELAAY(0.0)HPT(0.0)PPLS(0.99)PELPGS(0.0)CR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MYO9A 267577.4 1 15 457.1 306.95 HUMAN 1 8.0694 -5.2119 YHRLSHSSKGETAV_-p O75084;S568-p YHRLSHSSKGETAV_ 0.920194874356506 0.0798813035135586 0.0213333333333333 0.220333333333333 0.706158234420683 14.566878382568 0.0213333333333333 0.217576639571906 0.849931991764788 0.0349391360409297 0.198455196904614 2.79584651261832 O75084 FZD7 O75084.S568.p_FZD7 O75084_S568s _1_1_568_568 O75084 O75084 Frizzled-7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.7988.7988.3 7.73 7.73 1.247 4 1 1 0 551.9592 1573.895 S568s TMT10 564 (R) LSHSsKGETAV (-) LS(0.0)HS(0.0)S(0.99)KGET(0.0)AV K:TMT10,s:Phosphorylated S FZD7 64931.2 2 2 6267.1 12.73 HUMAN 1 0.7062 14.5669 YHYKEGMSPSEKPAW-p Q9UKE5;S526-p YHYKEGMSPSEKPAW 0.148724295141356 0.010059346918083 -0.292333333333333 -0.666333333333333 16.698908014486 28.0669000775337 -0.292333333333333 -0.666333333333333 0.0213849972404762 0.00156066608309182 -3.20356510366686 -5.85635992336198 Q9UKE5 TNIK Q9UKE5.S526.p_TNIK Q9UKE5_S526s _1_1_526_526 Q9UKE5 Q9UKE5|Q9UKE5-4|Q9UKE5-2|Q9UKE5-6|Q9UKE5-3|Q9UKE5-7|Q9UKE5-5|Q9UKE5-8 TRAF2 and NCK-interacting protein kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.16121.16121.3 11.37 11.37 1.545 2 1 1 0 729.0494 2105.1668 S526s TMT10 523 (K) EGMsPSEKPAWAK (E) EGMS(0.99)PS(0.0)EKPAWAK K:TMT10,s:Phosphorylated S TNIK 155453.9 2 31 131.1 535.29 HUMAN 1 -16.6989 -28.0669 YHYKRVESPVLPPVL-p Q99717;S133-p YHYKRVESPVLPPVL 0.795947364926604 0.183402697215571 -0.0383333333333333 0.137666666666667 1.91522181625999 9.68819868462917 -0.0383333333333333 0.137666666666667 0.643395202690754 0.10744349613815 -0.489944360761488 1.92683517313022 Q99717 SMAD5 Q99717.S133.p_SMAD5 Q99717_S133s _1_1_133_133 Q99717 Q15797|Q99717 Mothers against decapentaplegic homolog 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.23484.23484.3 17.97 17.97 99 1 1 1 0 623.0297 1787.1105 S133s TMT10 130 (K) RVEsPVLPPVLVPR (H) RVES(1.0)PVLPPVLVPR s:Phosphorylated S SMAD5 52942 2 8 2883.1 67.13 HUMAN 1 -1.9152 9.6882 YIDAFSDYANFK___-p P18433-3;Y798-p YIDAFSDYANFK___ 0.827997063487557 0.00351616489422878 0.0353333333333333 0.660666666666667 1.57580234203719 36.6681065288362 0.0353333333333333 0.660666666666667 0.695696415640772 0.000215372052603512 0.412667191382044 8.72906722449825 P18433 PTPRA P18433.3.Y798.p_PTPRA P18433-3_Y798y _1_1_798_798 P18433-3 P18433|P18433-3|P18433-2|P18433-4 Isoform 3 of Receptor-type tyrosine-protein phosphatase alpha GG20160819_MSz_CCLE_T4D7_pY_Injection_02.40441.40979.3 29.5 29.5 5.267 3 1 1 0 816.4036 2367.2273 Y798y TMT10 787 (K) VVQEYIDAFSDyANFK (-) VVQEY(0.0)IDAFS(0.0)DY(0.99)ANFK K:TMT10,y:Phosphorylated Y PTPRA 91630.3 7 1 92.1 29.5 HUMAN 1 1.5758 36.6681 YIDLEPDTPLSPEEL-p Q5VTI5;T957-p YIDLEPDTPLSPEEL 0.743332697084522 0.00987906290264591 0.0483333333333333 -0.527666666666667 2.44719095390804 28.2057068938613 0.0483333333333333 -0.527666666666667 0.569220987786221 0.00151157364302367 0.605706414781297 -5.89562802120303 Q5VTI5 NotFound Q5VTI5.T957.p_NotFound Q5VTI5_T957t _1_1_957_957 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.28241.28241.3 15.47 15.47 1.239 3 1 1 0 799.7464 2317.2579 T957t TMT10 950 (R) YIDLEPDtPLSPEELK (E) Y(0.0)IDLEPDT(0.99)PLS(0.0)PEELK K:TMT10,t:Phosphorylated T PLEKHA6 119745.7 3 31 52.1 743.36 HUMAN 1 2.4472 -28.2057 YIEENKYSRAKSPQP-p Q00839;S267-p YIEENKYSRAKSPQP 0.989051104038883 0.250953330832312 -0.00366666666666667 0.140666666666667 0.097603792705771 7.90962358796401 -0.00366666666666667 0.140666666666667 0.977776557552606 0.161822028607402 -0.0291674762208813 1.61897166084591 Q00839 HNRNPU Q00839.S267.p_HNRNPU Q00839_S267s _1_1_267_267 Q00839 Q00839|Q00839-2|A0A1W2PPS1|Q5RI18 Heterogeneous nuclear ribonucleoprotein U HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.21028.21028.3 16.71 13.68 6.92 4 1 1 0 746.0297 2156.1064 S267s TMT10 256 (R) GYFEYIEENKYsR (A) GY(0.0)FEY(0.0)IEENKY(0.0)S(0.99)R K:TMT10,s:Phosphorylated S HNRNPU 91324.5 2 7 657.1 253.07 HUMAN 1 -0.0976 7.9096 YIEQRRISHEGSPVK-p Q96II8-2;S415-p YIEQRRISHEGSPVK 0.706129390725202 0.0824661063726669 -0.0963333333333333 -0.295333333333333 2.84221947897867 14.3564503768355 -0.0963333333333333 -0.295333333333333 0.519730318434257 0.0366737197843572 -0.688178958074662 -2.7568964593155 Q96II8 LRCH3 Q96II8.2.S415.p_LRCH3 Q96II8-2_S415s _1_1_415_415 Q96II8-2 Q96II8-2|Q96II8-3 Isoform 2 of Leucine-rich repeat and calponin homology domain-containing protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.9357.9357.4 9.25 9.25 3.88 2 1 1 0 546.8161 2104.2755 S415s TMT10 413 (R) RIsHEGSPVKPVAIR (E) RIS(0.99)HEGS(0.0)PVKPVAIR K:TMT10,s:Phosphorylated S LRCH3 90369.5 3 5 1119.1 175.39 HUMAN 1 -2.8422 -14.3565 YIFLEYASPAHAVDA-p P55884-2;S239-p YIFLEYASPAHAVDA 0.974486381113699 0.394759442902435 0.00566666666666666 0.09 0.218817246525634 5.36521014545929 0.00566666666666666 0.09 0.950863715720189 0.290722728176603 0.0645318047915677 1.17033218007343 P55884 EIF3B P55884.2.S239.p_EIF3B P55884-2_S239s _1_1_239_239 P55884-2 P55884-2 Isoform 2 of Eukaryotic translation initiation factor 3 subunit B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.28522.28522.4 21.25 21.25 1.261 3 1 1 0 623.0781 2409.3219 S239s TMT10 231 (K) GYIFLEYAsPAHAVDAVK (N) GY(0.0)IFLEY(0.0)AS(0.99)PAHAVDAVK K:TMT10,s:Phosphorylated S EIF3B 99769.3 2 6 1156.1 171.77 HUMAN 1 0.2188 5.3652 YIGPELDSDEDDDEL-p Q15029;S19-p YIGPELDSDEDDDEL 0.441895459417409 0.0302910136990924 -0.108666666666667 0.362666666666667 6.53547271868506 20.5395175704518 -0.108666666666667 0.362666666666667 0.222050997333748 0.00883178001480884 -1.37942916655018 3.99184065840387 Q15029 EFTUD2 Q15029.S19.p_EFTUD2 Q15029_S19s _1_1_19_19 Q15029 Q15029|Q15029-3 116 kDa U5 small nuclear ribonucleoprotein component HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.33995.34600.3 25.51 25.51 2.195 5 1 1 0 1316.5528 3867.6752 S19s Acetyl 1 (-) MDTDLYDEFGNYIGPELDsDEDDDELGRETK (D) MDT(0.0)DLY(0.0)DEFGNY(0.0)IGPELDS(0.99)DEDDDELGRET(0.0)K K:TMT10,s:Phosphorylated S EFTUD2 110403.7 21 1 1913.1 107.79 HUMAN 1 -6.5355 20.5395 YIGPLPLSPSTIARG-p F8WEV5;S59-p YIGPLPLSPSTIARG 0.30240595197169 0.365909060543245 0.195 0.254333333333333 9.7318871162566 5.78839721692709 0.195 0.254333333333333 0.106368072237712 0.263730451518934 1.93516544114937 1.246488253088 F8WEV5 NotFound F8WEV5.S59.p_NotFound F8WEV5_S59s _1_1_59_59 F8WEV5 F8WEV5 Splicing factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.29230.29230.3 18.37 16.84 4.099 4 1 1 0 622.3419 1785.0472 S59s TMT10 51 (R) AYIGPLPLsPSTIAR (G) AY(0.0)IGPLPLS(0.99)PS(0.0)T(0.0)IAR s:Phosphorylated S SF1 12143.6 1 1 1138.3 173.35 HUMAN 1 9.7319 5.7884 YIKQEEFSPRSQNSQ-p O75376-2;S1127-p YIKQEEFSPRSQNSQ 0.625698374773997 0.410147771155865 -0.065 0.0943333333333333 3.78219876644013 5.14942310605712 -0.0651959734901488 0.0943333333333334 0.418581590015045 0.305532693981855 -0.875260841291875 1.13113702670337 O75376 NCOR1 O75376.2.S1127.p_NCOR1 O75376-2_S1127s _1_1_1127_1127 O75376-2 O75376|A0A088AWL3|O75376-2 Isoform 2 of Nuclear receptor corepressor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.22288.22288.4 13.24 8.83 2 6 1 1 0 903.9764 3532.9164 S1127s TMT10 1115 (K) SATLPYIKQEEFsPRSQNSQPEGLLVR (A) S(0.0)AT(0.0)LPY(0.0)IKQEEFS(0.99)PRS(0.0)QNS(0.0)QPEGLLVR K:TMT10,s:Phosphorylated S NCOR1 259453.1 4 6 35.1 889.74 HUMAN 1 -3.7822 5.1494 YILHCLRTTYKYFAL-p Q5VYS8;T624-p YILHCLRTTYKYFAL 0.295125154480667 0.0579257352109434 -0.173333333333333 -0.255 9.99167642057989 16.4798249897534 -0.173333333333333 -0.255 0.100191841279306 0.0224914523916144 -1.98026439555127 -3.15855721306103 Q5VYS8 ZCCHC6 Q5VYS8.T624.p_ZCCHC6 Q5VYS8_T608tT624tT625t_3_3_608_625 Q5VYS8 Q5VYS8|Q5VYS8-6|Q5VYS8-4 Terminal uridylyltransferase 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.20467.20467.4 7.67 2.72 1.36 6 3 3 0 888.4268 3308.7888 N604n T608t N610n T624t T625t Hydrogen 603 (K) RnVARtLnSQPVFEYILHCLRttYK (Y) RN(1.0)VART(0.99)LN(1.0)S(0.0)QPVFEY(0.0)ILHCLRT(0.99)T(0.99)Y(0.0)K C:Carbamidomethylation,K:TMT10-Lys-Only,n:Deamidated,t:Phosphorylated T ZCCHC6 173394.2 1 6 2208.1 93.42 HUMAN 1 -9.9917 -16.4798 YINPLLMSAEECV__-p P41743;S591-p YINPLLMSAEECV__ 0.973184341125227 0.938549858147602 0.00566666666666666 -0.0106666666666667 0.230170294556902 0.390810516014238 0.00566666666666667 -0.0106666666666667 0.948381274862595 0.913942658071319 0.0677978301454746 -0.113203450322279 P41743 PRKCI P41743.S591.p_PRKCI P41743_S591s _1_1_591_591 P41743 P41743 Protein kinase C iota type HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.36386.36386.3 24.55 24.55 6.613 3 1 1 0 1129.5369 3306.6314 S591s TMT10 573 (R) KIDQSEFEGFEYINPLLMsAEECV (-) KIDQS(0.0)EFEGFEY(0.0)INPLLMS(0.99)AEECV K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PRKCI 69231.1 11 8 1048.1 184.27 HUMAN 1 0.2302 -0.3908 YIQHKCYSDAAAKKQ-p Q9Y446-2;S364-p YIQHKCYSDAAAKKQ 0.0152113608189214 0.000952253650599092 -1.325 -1.995 42.9013682836796 63.630801172197 -1.325 -1.995 5.12699827868108e-05 4.3343091310053e-07 -11.5458536383104 -28.1768647607995 Q9Y446 PKP3 Q9Y446.2.S364.p_PKP3 Q9Y446-2_S364s _1_1_364_364 Q9Y446-2 Q9Y446-2 Isoform PKP3b of Plakophilin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.8503.8503.3 10.14 10.14 4.048 2 1 1 0 594.3137 1700.9609 S364s TMT10 362 (K) CYsDAAAKK (Q) CY(0.0)S(0.99)DAAAKK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PKP3 89109.7 1 13 454.1 307.47 HUMAN 1 -42.9014 -63.6308 YIQSLPQTPRKDFTQ-p O15264;T265-p YIQSLPQTPRKDFTQ 0.409512605417896 0.00840254345381164 -0.118333333333333 -0.437 7.14641293251302 29.4972771929088 -0.118333333333333 -0.437 0.19291176154717 0.00112272212377261 -1.48661847347145 -6.27089420609512 O15264 MAPK13 O15264.T265.p_MAPK13 O15264_T265t _1_1_265_265 O15264 O15264 Mitogen-activated protein kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13940.13940.3 14.6 10.19 2.717 4 1 1 0 652.6965 1876.1057 T265t TMT10 257 (K) SYIQSLPQtPRK (D) S(0.0)Y(0.0)IQS(0.0)LPQT(0.99)PRK K:TMT10,t:Phosphorylated T MAPK13 42260 4 2 3492.1 49.82 HUMAN 1 -7.1464 -29.4973 YIRERNMSPDLRQDF-p Q9UEY8;S42-p YIRERNMSPDLRQDF 0.245929798209507 0.845772025039165 0.205 0.0213333333333334 11.6572822332261 1.02208004837532 0.205 0.0213333333333334 0.0682765827774039 0.790300024062773 2.27168935078006 0.279380241162324 Q9UEY8 ADD3 Q9UEY8.S42.p_ADD3 Q9UEY8_S42s _1_1_42_42 Q9UEY8 Q9UEY8|Q9UEY8-2 Gamma-adducin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.20788.20788.3 15.09 9.82 99 1 1 1 0 774.3433 2241.0412 S42s TMT10 40 (R) NMsPDLRQDFNMMEQR (K) NMS(1.0)PDLRQDFNMMEQR s:Phosphorylated S ADD3 79495.5 4 19 264.2 396.09 HUMAN 1 11.6573 1.0221 YIRKDLRSPLIATPT-p P49116;S219-p YIRKDLRSPLIATPT 0.202791717001177 0.0131497665639062 -0.305333333333333 0.436666666666667 13.4416997669486 26.2004618351065 -0.305333333333333 0.436666666666667 0.0452720356903842 0.00239857783718011 -2.59097183339738 5.34728878901278 P49116 NR2C2 P49116.S219.p_NR2C2 P49116_S219s _1_1_219_219 P49116 P49116-2 Nuclear receptor subfamily 2 group C member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.25212.25234.3 19.11 19.11 7.76 3 1 1 0 761.4244 2202.2898 S219s TMT10 216 (K) DLRsPLIATPTFVADK (D) DLRS(0.99)PLIAT(0.0)PT(0.0)FVADK K:TMT10,s:Phosphorylated S NR2C2 66269.1 1 6 993.1 191.1 HUMAN 1 -13.4417 26.2005 YIRKDLRSPLTATPT-p P13056;S215-p YIRKDLRSPLTATPT 0.494124857697983 0.571434679042828 -0.104333333333333 0.0533333333333334 5.63796603545917 3.27597392421075 -0.104333333333333 0.0533333333333334 0.273025616516494 0.470329920374208 -1.21979088432854 0.775814584325218 P13056 NR2C1 P13056.S215.p_NR2C1 P13056_S215s _1_1_215_215 P13056 P13056|P13056-3|P13056-2 Nuclear receptor subfamily 2 group C member 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20155.20155.3 21.65 21.65 5.257 8 1 1 0 835.0804 2423.2615 S215s TMT10 212 (K) DLRsPLTATPTFVTDSESTR (S) DLRS(0.99)PLT(0.0)AT(0.0)PT(0.0)FVT(0.0)DS(0.0)ES(0.0)T(0.0)R s:Phosphorylated S NR2C1 68340.5 1 3 3274.1 55.26 HUMAN 1 -5.638 3.276 YIVMSPESPVKCGTQ-p H7BY22;S194-p YIVMSPESPVKCGTQ 0.137433340794007 0.142308893693173 -0.264 -0.219666666666667 17.6485333532761 11.159723115174 -0.264 -0.219666666666667 0.0171848863634317 0.0765645419145759 -3.39148126369572 -2.18311462951814 H7BY22 ZBTB44 H7BY22.S194.p_ZBTB44 H7BY22_S194s _1_1_194_194 H7BY22 Q8NCP5|H7BY22|Q8NCP5-2|Q8NCP5-4|Q8NCP5-3 Zinc finger and BTB domain-containing protein 44 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20612.20612.3 15.26 15.26 2.68 4 1 1 0 625.6628 1795.0076 S194s TMT10 186 (K) SYIVMSPEsPVK (C) S(0.0)Y(0.0)IVMS(0.0)PES(0.99)PVK K:TMT10,s:Phosphorylated S ZBTB44 64850.4 4 3 3799.1 42.87 HUMAN 1 -17.6485 -11.1597 YIYPSLESDDDDPAL-p Q9UPP1;S857-p YIYPSLESDDDDPAL 0.260386657049657 0.0133746183471685 -0.289333333333333 0.390666666666667 11.0854745460368 26.0587456694009 -0.289333333333333 0.390666666666667 0.0778847706567891 0.00247813769073981 -2.17109055378943 5.31002346408378 Q9UPP1 PHF8 Q9UPP1.S857.p_PHF8 Q9UPP1_S857s _1_1_857_857 Q9UPP1 Q9UPP1|Q9UPP1-2|Q9UPP1-3 Histone lysine demethylase PHF8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.25031.25031.3 18.6 15.59 2.215 4 1 1 0 898.7533 2614.2812 S857s TMT10 847 (K) DAEYIYPSLEsDDDDPALK (S) DAEY(0.0)IY(0.0)PS(0.0)LES(0.99)DDDDPALK K:TMT10,s:Phosphorylated S PHF8 118946 2 24 376.1 336.84 HUMAN 1 -11.0855 26.0587 YIYTKTGSPGPELLF-p A6NHB5;S466-p YIYTKTGSPGPELLF 0.747657915422397 0.0131320227712725 -0.0506666666666667 -0.376333333333333 2.39871945625293 26.2083081710152 -0.0506666666666667 -0.376333333333333 0.575609634326447 0.0023942482733757 -0.595396551743248 -5.34935757987626 A6NHB5 NotFound A6NHB5.S466.p_NotFound A6NHB5_S466s _1_1_466_466 A6NHB5 A6NHB5|Q14202|Q14202-2|A6NHN7|A6NL54|Q14202-3 Zinc finger MYM-type protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.15468.15468.3 19.1 12.56 2.103 2 1 1 0 807.0898 2339.2872 S466s TMT10 464 (K) TGsPGPELLFHEGQQKR (F) T(0.0)GS(0.99)PGPELLFHEGQQKR K:TMT10,s:Phosphorylated S ZMYM3 156426.3 9 6 331.1 357.99 HUMAN 1 -2.3987 -26.2083 YKAAKNPSPTTRPVS-p F5H2X7;S894-p YKAAKNPSPTTRPVS 0.0879384467271527 0.00290141923968056 -0.360666666666667 -0.795333333333333 22.5052239196291 38.3212150521288 -0.360666666666667 -0.795333333333333 0.00561665318482251 0.000147190064221175 -4.43842727049298 -9.40131524227545 F5H2X7 CIZ1 F5H2X7.S894.p_CIZ1 F5H2X7_S894s _1_1_894_894 F5H2X7 F5H2X7|Q9ULV3|Q5SYW2|Q9ULV3-2|Q9ULV3-4|Q9BTG3|Q9ULV3-3|Q9ULV3-5 Cip1-interacting zinc finger protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4228.4228.3 7.21 7.21 1.271 4 1 1 0 507.5984 1440.812 S894s TMT10 892 (K) NPsPTTRPVSR (R) NPS(0.99)PT(0.0)T(0.0)RPVS(0.0)R s:Phosphorylated S CIZ1 107380.6 7 13 497.1 292.98 HUMAN 1 -22.5052 -38.3212 YKACKVDSPTVNTTL-p Q9H0B6;S445-p YKACKVDSPTVNTTL 0.782792784230712 0.0854294599205826 -0.045 -0.236666666666667 2.04385080612498 14.1409875442278 -0.045 -0.236666666666667 0.624618609787289 0.0385390713529117 -0.5184913633628 -2.71719101507444 Q9H0B6 KLC2 Q9H0B6.S445.p_KLC2 Q9H0B6_S445s _1_1_445_445 Q9H0B6 Q9H0B6|Q9H0B6-2|A8MZ87 Kinesin light chain 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.11294.11294.2 12.06 7.6 1.603 4 1 1 0 1050.5518 2020.1261 S445s TMT10 440 (K) ACKVDsPTVNTTLR (S) ACKVDS(0.99)PT(0.0)VNT(0.0)T(0.0)LR C:Carbamidomethylation,K:TMT10,s:Phosphorylated S KLC2 69332.8 4 3 1131.1 174.01 HUMAN 1 -2.0439 -14.141 YKALTDDSDENEEED-p Q8NI35;S1212-p YKALTDDSDENEEED 0.154904834222275 0.673614682268759 0.31 -0.0683333333333333 16.2688802536063 2.34628539349578 0.31 -0.0683333333333333 0.023610869164289 0.582601315139128 3.11998981871952 -0.584121202939496 Q8NI35 INADL Q8NI35.S1212.p_INADL Q8NI35_S1212s _1_1_1212_1212 Q8NI35 Q8NI35|Q8NI35-2|Q8NI35-3|Q8NI35-4|Q8NI35-5 InaD-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17908.17908.3 23.07 23.07 3.796 3 1 1 0 993.7878 2899.3845 S1212s TMT10 1207 (K) ALTDDsDENEEEDAFTDQKIR (Q) ALT(0.0)DDS(0.99)DENEEEDAFT(0.0)DQKIR K:TMT10,s:Phosphorylated S PATJ 197163.3 6 17 127.1 542.92 HUMAN 1 16.2689 -2.3463 YKAMKRRSKDTCIVI-p O94832;S93-p YKAMKRRSKDTCIVI 0.181278013854463 0.00727522027631183 0.335333333333333 -0.546 14.6157930305757 30.5844276627724 0.335333333333333 -0.546 0.0345478238787217 0.000874092177689968 2.80669861449253 -6.6011939680405 O94832 MYO1D O94832.S93.p_MYO1D O94832_S93s _1_1_93_93 O94832 O94832|J3QRN6|K7EIG7|J3KRL0 Unconventional myosin-Id HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.13948.13948.4 15.32 15.4 2.034 6 1 1 0 781.1735 3041.6959 S93s TMT10 93 (R) sKDTCIVISGESGAGKTEASK (Y) S(0.99)KDT(0.0)CIVIS(0.0)GES(0.0)GAGKT(0.0)EAS(0.0)K K:TMT10,C:Carbamidomethylation,s:Phosphorylated S MYO1D 116998.8 2 16 296.8 379.15 HUMAN 1 14.6158 -30.5844 YKEDESQSEEENDYR-p Q8NHQ1;S240-p YKEDESQSEEENDYR 0.189806266686243 0.0124943875935368 -0.320666666666667 -0.536 14.1192890672178 26.5591131591572 -0.320666666666667 -0.536 0.0387321043537506 0.00220845565947622 -2.71484655314202 -5.44245101728022 Q8NHQ1 CEP70 Q8NHQ1.S240.p_CEP70 Q8NHQ1_S240s _1_1_240_240 Q8NHQ1 Q8NHQ1|Q8NHQ1-4|Q8NHQ1-5|Q8NHQ1-2|B7Z2D2 Centrosomal protein of 70 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13267.13267.4 17.62 11.87 2.138 7 1 1 0 952.1982 3725.8022 S240s TMT10 232 (R) QYKEDESQsEEENDYRNLDASPTYK (G) QY(0.0)KEDES(0.0)QS(0.99)EEENDY(0.0)RNLDAS(0.0)PT(0.0)Y(0.0)K K:TMT10,s:Phosphorylated S CEP70 70321.1 1 1 5627.1 17.62 HUMAN 1 -14.1193 -26.5591 YKEDLSKSPKTMKKL-p Q14155-5;S583-p YKEDLSKSPKTMKKL 0.706604154820368 0.14555797467021 0.0906666666666667 -0.279666666666667 2.8329981733937 11.0252202781443 0.0906666666666667 -0.279666666666667 0.520835025933021 0.0789728792615392 0.686283312375786 -2.15955213076784 Q14155 ARHGEF7 Q14155.5.S583.p_ARHGEF7 Q14155-5_S583s _1_1_583_583 Q14155-5 Q14155|Q14155-3|Q14155-2|Q14155-5|B1ALK7|Q14155-1|Q14155-6|E9PDQ5 Isoform 5 of Rho guanine nucleotide exchange factor 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8546.8546.2 11.67 6.08 2.1 2 1 1 0 835.9706 1590.967 S583s TMT10 578 (K) EDLSKsPK (T) EDLS(0.0)KS(0.99)PK K:TMT10,s:Phosphorylated S ARHGEF7 83311.3 5 7 434.1 313.68 HUMAN 1 2.833 -11.0252 YKEIVNFSPIARKDS-p O15264;S350-p YKEIVNFSPIARKDS 0.307433256565227 0.0531294588896049 0.163333333333333 0.412666666666667 9.57300489364581 17.0004934729763 0.163333333333333 0.412666666666667 0.110331496954701 0.0199503561347083 1.90761248846416 3.26024763331398 O15264 MAPK13 O15264.S350.p_MAPK13 O15264_S350s _1_1_350_350 O15264 O15264 Mitogen-activated protein kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.22702.22702.3 10.69 10.69 99 1 1 1 0 485.5916 1374.7943 S350s TMT10 345 (K) EIVNFsPIAR (K) EIVNFS(1.0)PIAR s:Phosphorylated S MAPK13 42260 1 3 3492.1 49.82 HUMAN 1 9.573 17.0005 YKFTASASHTERKLK-p Q9Y4E5;S838-p YKFTASASHTERKLK 0.178631329890346 0.737016495021713 -0.351333333333333 0.0566666666666667 14.7721057805959 1.82740288652357 -0.351333333333333 0.0566666666666667 0.0333264782186197 0.656537763424933 -2.83581769958871 0.470177682033172 Q9Y4E5 ZNF451 Q9Y4E5.S838.p_ZNF451 Q9Y4E5_S838s _1_1_838_838 Q9Y4E5 Q9Y4E5|E9PH99|Q9Y4E5-2 E3 SUMO-protein ligase ZNF451 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.5503.5503.3 17.18 17.18 1.974 4 1 1 0 472.5554 1335.6854 S838s TMT10 833 (K) FTASAsHTER (K) FT(0.0)AS(0.0)AS(0.99)HT(0.0)ER s:Phosphorylated S ZNF451 124335 3 3 1774.1 115.94 HUMAN 1 -14.7721 1.8274 YKGKSPQTPELVEAL-p Q9NZB2-6;T683-p YKGKSPQTPELVEAL 0.647581361875358 0.118321176394858 0.127333333333333 -0.170333333333333 3.53540930680538 12.2227559646486 0.127333333333333 -0.170333333333333 0.443056456056701 0.0599410578989809 0.827211241660949 -2.3706999067712 Q9NZB2 FAM120A Q9NZB2.6.T683.p_FAM120A Q9NZB2-6_T683t _1_1_683_683 Q9NZB2-6 Q9NZB2-6|Q9NZB2-4 Isoform F of Constitutive coactivator of PPAR-gamma-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.28898.28898.3 14.98 14.98 2.749 2 1 1 0 622.9913 1786.9901 T683t TMT10 680 (K) SPQtPELVEALAFR (E) S(0.0)PQT(0.99)PELVEALAFR t:Phosphorylated T FAM120A 126524.7 1 9 839.1 214.86 HUMAN 1 3.5354 -12.2228 YKGLRAGYHCGYCDS-p F5GXE4;Y14-p YKGLRAGYHCGYCDS 0.540159725844885 0.0926332221057354 0.086 -0.592333333333333 4.93722022717356 13.6646889766674 0.086 -0.592333333333333 0.320832220652042 0.0430062031750803 1.09254071586589 -2.63002633983275 F5GXE4 ATE1 F5GXE4.Y14.p_ATE1 F5GXE4_Y14y _1_1_14_14 F5GXE4 F5GXE4 Arginyl-tRNA--protein transferase 1 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.7245.7245.3 17.91 17.91 17.909 3 1 1 0 619.2669 1775.8245 Y14y TMT10 12 (R) AGyHCGYCDSK (E) AGY(0.99)HCGY(0.0)CDS(0.0)K C:Carbamidomethylation,K:TMT10,y:Phosphorylated Y ATE1 59156.1 2 1 194.1 17.91 HUMAN 1 4.9372 -13.6647 YKKIAGMSQKTVTIT-p Q9NS91;S368-p YKKIAGMSQKTVTIT 0.852872919348793 0.0042220720926076 0.0323333333333333 -0.715 1.33830355692295 34.929963472513 0.0323333333333333 -0.715 0.734800840342741 0.000321368756809659 0.356710370326726 -8.06846598735698 Q9NS91 RAD18 Q9NS91.S368.p_RAD18 Q9NS91_S368s _1_1_368_368 Q9NS91 Q9NS91 E3 ubiquitin-protein ligase RAD18 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11299.11299.3 10.12 10.12 99 1 1 1 0 543.9849 1549.9703 S368s TMT10 363 (K) KIAGMsQK (T) KIAGMS(1.0)QK K:TMT10,s:Phosphorylated S RAD18 57077.5 2 5 1349.1 151 HUMAN 1 1.3383 -34.93 YKLVVLGSGGVGKSA-p P62834;S11-p YKLVVLGSGGVGKSA 0.912946068007014 0.763313873820535 -0.017 -0.0293333333333333 0.771220596667676 1.6213354929885 -0.017 -0.0293333333333333 0.837293925278289 0.6884405623804 -0.215464139220007 -0.423163533994577 P62834 RAP1A P62834.S11.p_RAP1A P62834_S11s _1_1_11_11 P62834 P62834|P61224 Ras-related protein Rap-1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23381.23381.3 12.47 12.47 99 1 1 1 0 508.6375 1443.9299 S11s TMT10 6 (K) LVVLGsGGVGK (S) LVVLGS(1.0)GGVGK K:TMT10,s:Phosphorylated S RAP1A 21329.1 2 1 4850.1 25.89 HUMAN 1 -0.7712 -1.6213 YKPHRGYSPGRGDSN-p A2AJT9;S100-p YKPHRGYSPGRGDSN 0.834327857608735 0.062353721421389 0.0423333333333333 0.34 1.51685440211048 16.038736049493 0.0423333333333333 0.34 0.705203663526494 0.0248958176918226 0.398932872743806 3.073453336121 A2AJT9 CXorf23 A2AJT9.S100.p_CXorf23 A2AJT9_S100s _1_1_100_100 A2AJT9 A2AJT9|A2AJT9-2|A2AJT9-3 BCLAF1 and THRAP3 family member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.3877.3877.3 12.84 9.9 3.828 3 1 1 0 492.226 1394.6974 S100s TMT10 98 (R) GYsPGRGDSNR (R) GY(0.0)S(0.99)PGRGDS(0.0)NR s:Phosphorylated S BCLAF3 84269.3 6 3 1202.1 166.95 HUMAN 1 1.5169 16.0387 YKPMTNVS_______-p A0A0C4DFX9;S539-p YKPMTNVS_______ 0.995111893240457 0.800023807923559 0.00133333333333333 -0.0263333333333333 0.0419313696272508 1.3548656242031 0.00133333333333331 -0.0263333333333333 0.990391405730911 0.73200397190925 0.0126092152778618 -0.360630243282884 A0A0C4DFX9 NELFA A0A0C4DFX9.S539.p_NELFA A0A0C4DFX9_S539s _1_1_539_539 A0A0C4DFX9 A0A0C4DFX9|Q9H3P2 Negative elongation factor A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10983.10983.3 12.36 12.36 11.183 3 1 1 0 612.3428 1755.0442 S539s TMT10 531 (K) KYKPMTNVs (-) KY(0.0)KPMT(0.0)NVS(0.99) K:TMT10,s:Phosphorylated S NELFA 58726.5 1 13 1015.1 188.17 HUMAN 1 0.0419 -1.3549 YKQNPEQSADEDAEK-p B5ME19;S166-p YKQNPEQSADEDAEK 0.134264480831341 0.812475137314767 -0.626 -0.109666666666667 17.9215741001266 1.26435098236378 -0.626 -0.109666666666667 0.0161377353867678 0.74742032170889 -3.44641078364297 -0.338899277123879 B5ME19 EIF3CL B5ME19.S166.p_EIF3CL B5ME19_S166s _1_1_166_166 B5ME19 B5ME19|Q99613|Q99613-2 Eukaryotic translation initiation factor 3 subunit C-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.13266.13266.5 17.79 13.76 17.788 6 1 1 0 774.5704 3788.8607 S166s TMT10 148 (K) YNRDFESHITSYKQNPEQsADEDAEK (N) Y(0.0)NRDFES(0.0)HIT(0.0)S(0.0)Y(0.0)KQNPEQS(0.99)ADEDAEK K:TMT10,s:Phosphorylated S EIF3CL 106155.7 4 5 451.1 308.49 HUMAN 1 -17.9216 -1.2644 YKQSCRSSLAELMAR-p Q9ULE0;S957-p YKQSCRSSLAELMAR 0.471566782528917 0.359328685401864 -0.163666666666667 -0.149 6.02452423323304 5.89791117602244 -0.163666666666667 -0.149 0.249774200017085 0.257163236208575 -1.28893121538009 -1.26605950158606 Q9ULE0 WWC3 Q9ULE0.S957.p_WWC3 Q9ULE0_S957s _1_1_957_957 Q9ULE0 Q9ULE0 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.20585.20585.2 11.85 11.85 1.358 2 1 1 0 643.8224 1206.6714 S957s TMT10 956 (R) SsLAELMAR (T) S(0.0)S(0.99)LAELMAR s:Phosphorylated S WWC3 123814.7 5 28 161.1 495.35 HUMAN 1 -6.0245 -5.8979 YKQVLEPSFRQAFPN-p P26641-2;S229-p YKQVLEPSFRQAFPN 0.490214660431765 0.428280255264028 0.097 -0.127666666666667 5.70754196930205 4.90328579039506 0.097 -0.127666666666667 0.268686473376676 0.323348924644524 1.23228429580222 -1.08608863525963 P26641 EEF1G P26641.2.S229.p_EEF1G P26641-2_S229s _1_1_229_229 P26641-2 P26641-2 Isoform 2 of Elongation factor 1-gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.18561.18561.3 7.9 7.9 2.381 2 1 1 0 738.3723 2133.1403 S229s TMT10 224 (K) QVLEPsFRQAFPNTNR (W) QVLEPS(0.99)FRQAFPNT(0.0)NR s:Phosphorylated S EEF1G 56491.1 1 3 2076.1 98.89 HUMAN 1 5.7075 -4.9033 YKRKRRQSVGDFVSG-p Q6P4F7;S285-p YKRKRRQSVGDFVSG 0.387151970762572 0.00224652614039878 0.135666666666667 -0.955 7.62332389922978 41.0570706587492 0.135666666666667 -0.955 0.172849294025231 7.83958248818562e-05 1.56974061285023 -10.6171894270742 Q6P4F7 ARHGAP11A Q6P4F7.S285.p_ARHGAP11A Q6P4F7_S285s _1_1_285_285 Q6P4F7 Q6P4F7|Q6P4F7-3|Q6P4F7-2|H3BR51 Rho GTPase-activating protein 11A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.19461.19461.3 14.37 14.37 6.25 2 1 1 0 672.6955 1936.1016 S285s TMT10 283 (R) RQsVGDFVSGALNK (F) RQS(0.99)VGDFVS(0.0)GALNK K:TMT10,s:Phosphorylated S ARHGAP11A 114948.2 2 1 414.1 321.53 HUMAN 1 7.6233 -41.0571 YKRRTLTSPGDLDIY-p Q96M89;S49-p YKRRTLTSPGDLDIY 0.294305276064614 0.00695221592447754 -0.255 -0.628333333333333 10.0250411876823 30.9347547657466 -0.255 -0.628333333333334 0.0994250644619746 0.000806351732553119 -1.98606130903519 -6.71056837592972 Q96M89 CCDC138 Q96M89.S49.p_CCDC138 Q96M89_S49s _1_1_49_49 Q96M89 Q96M89|Q96M89-2|H7BZ08 Coiled-coil domain-containing protein 138 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.23278.23278.2 12.09 12.09 1.186 5 1 1 0 1060.5353 2040.0901 S49s TMT10 46 (R) TLTsPGDLDIYSGDK (V) T(0.0)LT(0.0)S(0.99)PGDLDIY(0.0)S(0.0)GDK K:TMT10,s:Phosphorylated S CCDC138 76958.9 2 1 2970.1 64.38 HUMAN 1 -10.025 -30.9348 YKSTTSVSEEDVSSR-p Q96IZ0;S233-p YKSTTSVSEEDVSSR 0.621046447454469 0.0483787683066092 0.124 0.278666666666667 3.84660158746164 17.5896437934978 0.124 0.278666666666667 0.412420117132401 0.017419497415156 0.887691429697347 3.37700244099904 Q96IZ0 PAWR Q96IZ0.S233.p_PAWR Q96IZ0_S233s _1_1_233_233 Q96IZ0 Q96IZ0 PRKC apoptosis WT1 regulator protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.6858.6858.3 9.02 9.02 2.448 7 1 1 0 564.9225 1612.7863 S233s TMT10 228 (K) STTSVsEEDVSSR (Y) S(0.0)T(0.0)T(0.0)S(0.0)VS(0.99)EEDVS(0.0)S(0.0)R s:Phosphorylated S PAWR 36681 1 4 4160.1 36.45 HUMAN 1 3.8466 17.5896 YKVQGSDSDEEVVVA-p P26640;S527-p YKVQGSDSDEEVVVA 0.954578198037871 0.0327671391249166 0.011 0.266666666666667 0.395955882095354 20.0299313075109 0.011 0.266666666666667 0.912860492598292 0.00993131756691636 0.114644929011485 3.88173765186414 P26640 VARS P26640.S527.p_VARS P26640_S527s _1_1_527_527 P26640 P26640|P26640-2 Valine--tRNA ligase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.14120.14120.3 16.47 16.47 2.442 4 1 1 0 667.6518 1920.9712 S527s TMT10 522 (K) VQGSDsDEEVVVATTR (I) VQGS(0.0)DS(0.99)DEEVVVAT(0.0)T(0.0)R s:Phosphorylated S VARS 141728.6 1 4 2729.1 72.52 HUMAN 1 0.396 20.0299 YKYVSKYSLVKNKIS-p Q96FQ6;S27-p YKYVSKYSLVKNKIS 0.0726715236758007 0.0814171534624676 -0.560666666666667 -0.288666666666667 24.4828035889942 14.4442721422432 -0.560666666666667 -0.288666666666667 0.00356221100574622 0.0359395624776892 -4.9139682218405 -2.77313119398719 Q96FQ6 S100A16 Q96FQ6.S27.p_S100A16 Q96FQ6_S27s _1_1_27_27 Q96FQ6 Q96FQ6 Protein S100-A16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.17545.17545.3 12.92 12.92 2.747 4 1 1 0 618.6975 1774.1082 S27s TMT10 22 (K) YVSKYsLVK (N) Y(0.0)VS(0.0)KY(0.0)S(0.99)LVK K:TMT10,s:Phosphorylated S S100A16 11858.2 1 1 3621.1 46.8 HUMAN 1 -24.4828 -14.4443 YLAEARISFNLGAAE-p Q9C0D0;S78-p YLAEARISFNLGAAE 0.352682165710916 0.969602467388836 -0.143666666666667 0.0103333333333333 8.40499598105702 0.189913705860835 -0.143666666666667 0.0103333333333333 0.144377794035619 0.957213090891564 -1.70535421879003 0.0561767125898881 Q9C0D0 PHACTR1 Q9C0D0.S78.p_PHACTR1 Q9C0D0_S78s _1_1_78_78 Q9C0D0 Q9C0D0|Q9C0D0-2 Phosphatase and actin regulator 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.25784.25784.2 9.18 9.18 99 1 1 1 0 872.4261 1663.8853 S78s TMT10 77 (R) IsFNLGAAEEVER (L) IS(1.0)FNLGAAEEVER s:Phosphorylated S PHACTR1 66763.3 1 4 638.1 255.38 HUMAN 1 -8.405 0.1899 YLCEGTESPYQTGQL-p Q15262-3;S857-p YLCEGTESPYQTGQL 0.326502819643871 0.2494527606832 0.190333333333333 -0.126666666666667 9.09929100669934 7.94453626909457 0.190333333333333 -0.126666666666667 0.123046963072543 0.160526365576775 1.82555213221952 -1.62502631847276 Q15262 PTPRK Q15262.3.S857.p_PTPRK Q15262-3_S857s _1_1_857_857 Q15262-3 E9PGC5|Q15262-4|Q5TG12|Q15262-3|Q15262-2 Isoform 3 of Receptor-type tyrosine-protein phosphatase kappa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.16341.16341.3 20.82 20.82 2.389 5 1 1 0 877.0828 2549.2656 S857s TMT10 850 (R) YLCEGTEsPYQTGQLHPAIR (V) Y(0.0)LCEGT(0.0)ES(0.99)PY(0.0)QT(0.0)GQLHPAIR C:Carbamidomethylation,s:Phosphorylated S PTPRK 165014.2 2 3 3730.1 44.34 HUMAN 1 9.0993 -7.9445 YLDEAPSSPDVKLAV-p Q9Y3S1;S1818-p YLDEAPSSPDVKLAV 0.555476059489065 0.531389300291025 -0.078 0.0753333333333334 4.7135546633024 3.69123872773049 -0.078 0.0753333333333334 0.337788246228911 0.427440950805932 -1.05129400862427 0.857492279705301 Q9Y3S1 WNK2 Q9Y3S1.S1818.p_WNK2 Q9Y3S1_S1817sS1818s_2_2_1817_1818 Q9Y3S1 Q9Y3S1|Q9Y3S1-4|Q9Y3S1-2|F8W9F9|E9PCD1 Serine/threonine-protein kinase WNK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.24645.24645.3 12.97 12.97 4.23 5 2 2 0 890.0812 2508.291 S1817s S1818s TMT10 1804 (R) YSAPPDVYLDEAPssPDVK (L) Y(0.0)S(0.0)APPDVY(0.0)LDEAPS(0.99)S(0.99)PDVK K:TMT10,s:Phosphorylated S WNK2 244440.3 1 5 3090.1 60.95 HUMAN 1 -4.7136 3.6912 YLEQAGASPHRVHYD-p Q9P253;S689-p YLEQAGASPHRVHYD 0.359362450321461 0.0191641361648226 0.461666666666667 0.712333333333333 8.25946546632224 23.6123676465682 0.461666666666667 0.712333333333333 0.149297815540753 0.00435274510050068 1.68014353015467 4.69526030759869 Q9P253 VPS18 Q9P253.S689.p_VPS18 Q9P253_S689s _1_1_689_689 Q9P253 Q9P253 Vacuolar protein sorting-associated protein 18 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.22806.22806.5 8.93 8.93 4.074 4 1 1 0 667.1495 3251.769 S689s TMT10 674 (R) GRPDSLLAYLEQAGAsPHRVHYDLK (Y) GRPDS(0.0)LLAY(0.0)LEQAGAS(0.99)PHRVHY(0.0)DLK K:TMT10,s:Phosphorylated S VPS18 111552.9 1 3 3559.1 48.24 HUMAN 1 8.2595 23.6124 YLFYDGESVSGKVNL-p O75436;S47-p YLFYDGESVSGKVNL 0.158960913482591 0.0253401053275901 -0.318333333333333 0.440666666666667 15.9971596888766 21.7237897330673 -0.318333333333333 0.440666666666667 0.0251352975713152 0.00672389660696301 -3.06764493378284 4.2546247880309 O75436 VPS26A O75436.S47.p_VPS26A O75436_S47s _1_1_47_47 O75436 O75436|O75436-2|S4R3Q6|S4R2Y3 Vacuolar protein sorting-associated protein 26A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.18433.18433.3 17.6 17.6 2.207 4 1 1 0 680.6674 1960.0217 S47s TMT10 39 (K) HYLFYDGEsVSGK (V) HY(0.0)LFY(0.0)DGES(0.99)VS(0.0)GK K:TMT10,s:Phosphorylated S VPS26A 38283.3 1 1 4320.1 33.7 HUMAN 1 -15.9972 21.7238 YLGARLASFYERAGR-p P38606;S384-p YLGARLASFYERAGR 0.932151691896397 0.618028835500003 0.0133333333333333 0.0493333333333334 0.604159668056485 2.83988766677809 0.0133333333333333 0.0493333333333334 0.870129781304588 0.520009446757628 0.17140911795105 0.687606135131604 P38606 ATP6V1A P38606.S384.p_ATP6V1A P38606_S384s _1_1_384_384 P38606 P38606|P38606-2 V-type proton ATPase catalytic subunit A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17889.17889.2 7.92 7.92 7.925 2 1 1 0 597.7919 1114.6094 S384s TMT10 382 (R) LAsFYER (A) LAS(0.99)FY(0.0)ER s:Phosphorylated S ATP6V1A 68702.3 1 3 4072.1 38.14 HUMAN 1 0.6042 2.8399 YLGDAFGSPQTDHGF-p Q9H8N7;S248-p YLGDAFGSPQTDHGF 0.328187800368221 0.0966082391513758 -0.203666666666667 -0.186333333333333 9.04672643883814 13.4214374386051 -0.203666666666667 -0.186333333333333 0.124545303734944 0.0454837491996968 -1.81645188385507 -2.58581818550103 Q9H8N7 ZNF395 Q9H8N7.S248.p_ZNF395 Q9H8N7_S248s _1_1_248_248 Q9H8N7 Q9H8N7 Zinc finger protein 395 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.30962.30962.4 23.37 20.06 1.164 4 1 1 0 904.1656 3533.6699 S248s TMT10 241 (K) YLGDAFGsPQTDHGFETDPDPFLLDEPAPR (K) Y(0.0)LGDAFGS(0.99)PQT(0.0)DHGFET(0.0)DPDPFLLDEPAPR s:Phosphorylated S ZNF395 55736.8 2 2 2181.1 94.26 HUMAN 1 -9.0467 -13.4214 YLKRPPESPPIVEEW-p Q9BTL3;S36-p YLKRPPESPPIVEEW 0.420388213666819 0.0181749418560776 0.134666666666667 0.343666666666667 6.94281617494623 23.960944315215 0.134666666666667 0.343666666666667 0.202170778067499 0.00401703456312986 1.45099972811195 4.77969361799447 Q9BTL3 FAM103A1 Q9BTL3.S36.p_FAM103A1 Q9BTL3_S36s _1_1_36_36 Q9BTL3 Q9BTL3 RNMT-activating mini protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16385.16588.3 18.54 12.24 6.77 2 1 1 0 701.3474 2022.0606 S36s TMT10 32 (K) RPPEsPPIVEEWNSR (A) RPPES(0.99)PPIVEEWNS(0.0)R s:Phosphorylated S FAM103A1 14381.2 5 1 5522.1 18.54 HUMAN 1 6.9428 23.9609 YLLSGDISEAEHCLK-p Q53EL6;S345-p YLLSGDISEAEHCLK 0.635646593994659 0.00112992831744192 0.104666666666667 1.11033333333333 3.66971755801241 48.9793252466162 0.104666666666667 1.11033333333333 0.42956436243348 1.26493286192466e-05 0.853444727643037 15.0136272891026 Q53EL6 PDCD4 Q53EL6.S345.p_PDCD4 Q53EL6_S345s _1_1_345_345 Q53EL6 Q53EL6|Q53EL6-2 Programmed cell death protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25225.25225.4 19.03 16.6 2.314 3 1 1 0 601.2986 2322.2052 S345s TMT10 337 (K) EYLLSGDIsEAEHCLK (E) EY(0.0)LLS(0.0)GDIS(0.99)EAEHCLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PDCD4 52133.7 2 12 476.1 301.17 HUMAN 1 3.6697 48.9793 YLPALGYSKRVHLMN-p P54577;S205-p YLPALGYSKRVHLMN 0.403544366812528 0.749705752304287 -0.138333333333333 -0.0333333333333333 7.27545865319689 1.72923649644372 -0.138333333333333 -0.0333333333333333 0.18726393053817 0.671546902637088 -1.50914985248593 -0.447918523707241 P54577 YARS P54577.S205.p_YARS P54577_S205s _1_1_205_205 P54577 P54577|A0A0C4DGZ5 Tyrosine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.23613.23613.3 11.19 8.32 4.173 3 1 1 0 517.2859 1469.8768 S205s TMT10 198 (K) YLPALGYsK (R) Y(0.0)LPALGY(0.0)S(0.99)K K:TMT10,s:Phosphorylated S YARS 59484.7 1 1 4873.1 25.58 HUMAN 1 -7.2755 -1.7292 YLPLFKPSVSTSKAI-p Q9UJS0-2;S665-p YLPLFKPSVSTSKAI 0.664425582516381 0.041853041805853 0.073 0.270666666666667 3.32040419521366 18.4710567413222 0.073 0.270666666666667 0.46554276372684 0.0142198274294804 0.784771449859088 3.55522632914594 Q9UJS0 SLC25A13 Q9UJS0.2.S665.p_SLC25A13 Q9UJS0-2_S665s _1_1_665_665 Q9UJS0-2 Q9UJS0-2 Isoform 2 of Calcium-binding mitochondrial carrier protein Aralar2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.34638.34638.4 9.37 9.37 1.141 5 1 1 0 638.6201 2471.4881 S665s TMT10 655 (K) FGLYLPLFKPsVSTSK (A) FGLY(0.0)LPLFKPS(0.99)VS(0.0)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SLC25A13 74701.7 5 2 5337.1 20.36 HUMAN 1 3.3204 18.4711 YLQLAGDTDEELNSC-p O76024;T117-p YLQLAGDTDEELNSC 0.241704142736427 0.228301002683181 0.173 -0.143333333333333 11.7927992756167 8.45008919195383 0.173 -0.143333333333333 0.0661789804929132 0.142886461332239 2.29563600316207 -1.71258836011147 O76024 WFS1 O76024.T117.p_WFS1 O76024_T117t _1_1_117_117 O76024 O76024 Wolframin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.35861.35861.4 23.9 21.39 4.55 4 1 1 0 893.4455 3490.7928 T117t TMT10 109 (K) HYLQLAGDtDEELNSCTAVDWLVLAAK (Q) HY(0.0)LQLAGDT(0.99)DEELNS(0.0)CT(0.0)AVDWLVLAAK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T WFS1 101430.7 4 2 3140.1 59.55 HUMAN 1 11.7928 -8.4501 YLQNRRDSLSGKEKK-p Q92845;S102-p YLQNRRDSLSGKEKK 0.0668477670009952 0.564127030238995 -0.508666666666667 -0.157333333333333 25.3207001724808 3.35068960799834 -0.508666666666667 -0.157333333333333 0.00293717608028727 0.462307606619763 -5.12546152984664 -0.790665421034104 Q92845 KIFAP3 Q92845.S102.p_KIFAP3 Q92845_S102s _1_1_102_102 Q92845 Q92845|Q92845-3|Q92845-2 Kinesin-associated protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34634.34634.4 11.4 11.4 1.173 4 1 1 0 769.9085 2996.6569 S102s TMT10 86 (K) LNEVEQLLYYLQNRRDsLSGK (E) LNEVEQLLY(0.0)Y(0.0)LQNRRDS(0.99)LS(0.0)GK K:TMT10,s:Phosphorylated S KIFAP3 92002.3 2 2 3725.1 44.47 HUMAN 1 -25.3207 -3.3507 YLRPRIPSPIGFTPG-p Q9NRA8;S587-p YLRPRIPSPIGFTPG 0.975059407652305 0.85071083554974 0.00466666666666666 -0.0186666666666666 0.212087419677769 0.987326125936691 0.00466666666666665 -0.0186666666666666 0.952338316262272 0.796649682531119 0.0625921337615339 -0.270669677154677 Q9NRA8 EIF4ENIF1 Q9NRA8.S587.p_EIF4ENIF1 Q9NRA8_S587s _1_1_587_587 Q9NRA8 Q9NRA8-3|B1AKL4|Q9NRA8-2 Eukaryotic translation initiation factor 4E transporter HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.36367.36367.3 20.56 18 3.405 2 1 1 0 921.4687 2682.4275 S587s TMT10 585 (R) IPsPIGFTPGPQQLLGDPFQGMR (K) IPS(0.99)PIGFT(0.0)PGPQQLLGDPFQGMR s:Phosphorylated S EIF4ENIF1 108541.3 15 16 150.1 511.59 HUMAN 1 0.2121 -0.9873 YLSILPKTPEGISEE-p Q86SQ0;T574-p YLSILPKTPEGISEE 0.639853815157196 0.559030464172909 -0.0736666666666667 -0.074 3.62281818804779 3.40459726628749 -0.0736666666666667 -0.074 0.434228356832503 0.45660459049056 -0.844307455576423 -0.80133639590983 Q86SQ0 PHLDB2 Q86SQ0.T574.p_PHLDB2 Q86SQ0_T574t _1_1_574_574 Q86SQ0 Q86SQ0|Q86SQ0-3|Q86SQ0-2|E9PGF6 Pleckstrin homology-like domain family B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.23332.23332.3 19.05 17.21 3.175 8 1 1 0 1016.1871 2966.5723 T574t TMT10 561 (K) ASSESSYLSILPKtPEGISEEQR (S) AS(0.0)S(0.0)ES(0.0)S(0.0)Y(0.0)LS(0.0)ILPKT(0.99)PEGIS(0.0)EEQR K:TMT10,t:Phosphorylated T PHLDB2 142897.4 3 10 1231.1 163.76 HUMAN 1 -3.6228 -3.4046 YLSMRRHTVGVADPR-p H0Y494;T421-p YLSMRRHTVGVADPR 0.346678857896147 0.0567125659044053 0.146666666666667 0.294 8.55032068317538 16.6091466771838 0.146666666666667 0.294 0.139626525698103 0.0218315882731595 1.73051956152293 3.18368784320933 H0Y494 SIK3 H0Y494.T421.p_SIK3 H0Y494_T421t _1_1_421_421 H0Y494 J3KPC8|Q9Y2K2|H0Y494|Q9Y2K2-4|Q9Y2K2-3 Serine/threonine-protein kinase SIK3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15381.15381.4 12.29 6.91 11.987 2 1 1 0 680.6065 2639.4339 T421t TMT10 419 (R) RHtVGVADPRTEVMEDLQK (L) RHT(0.99)VGVADPRT(0.0)EVMEDLQK K:TMT10,t:Phosphorylated T SIK3 139782.1 5 3 1025.2 187.04 HUMAN 1 8.5503 16.6091 YLSNNPNSHTDNNAK-p Q96SH1;S422-p YLSNNPNSHTDNNAK 0.692322550916474 0.946863597084931 0.06 -0.00933333333333332 2.99433286602918 0.338426763972283 0.06 -0.00933333333333333 0.501841662656665 0.925033207439708 0.719261004837393 -0.0985542873250741 Q96SH1 NotFound Q96SH1.S422.p_NotFound Q96SH1_S422s _1_1_422_422 Q96SH1 Q96SH1|P05549|P05549-6|P05549-5 Transcription factor AP-2 alpha (Activating enhancer binding protein 2 alpha), isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.10559.10559.3 8.7 8.7 1.642 4 1 1 0 786.7007 2278.1287 S422s TMT10 414 (K) MYLSNNPNsHTDNNAK (S) MY(0.0)LS(0.0)NNPNS(0.99)HT(0.0)DNNAK K:TMT10,s:Phosphorylated S TFAP2A 48719.9 2 8 2051.1 100.4 HUMAN 1 2.9943 -0.3384 YLSRATRSAEALGPG-p Q9P227;S361-p YLSRATRSAEALGPG 0.543328167061294 0.490518417207478 0.087 -0.082 4.88996868638714 4.13457754991552 0.087 -0.082 0.324341955919663 0.385959953145857 1.08385518493276 -0.942604750801201 Q9P227 ARHGAP23 Q9P227.S361.p_ARHGAP23 Q9P227_S361s _1_1_361_361 Q9P227 Q9P227|Q9P227-2 Rho GTPase-activating protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.18904.18904.2 15.28 15.28 15.277 2 1 1 0 817.4285 1553.8849 S361s TMT10 361 (R) sAEALGPGALVSPR (F) S(0.99)AEALGPGALVS(0.0)PR s:Phosphorylated S ARHGAP23 163444.2 1 33 148.2 512.52 HUMAN 1 4.89 -4.1346 YLTAELSTPDGSVAD-p Q9C040-2;T398-p YLTAELSTPDGSVAD 0.416746036141407 0.00591016765832199 -0.138333333333333 0.597 7.01430753299677 32.1943834818401 -0.138333333333333 0.597 0.19886998761941 0.000603339351028501 -1.46351743857135 7.11618811636328 Q9C040 TRIM2 Q9C040.2.T398.p_TRIM2 Q9C040-2_T398t _1_1_398_398 Q9C040-2 A0A0J9YX34|Q9C040-2 Isoform 2 of Tripartite motif-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.26166.26166.3 24.69 24.69 1.124 6 1 1 0 1063.8616 3109.5941 T398t TMT10 387 (K) TGNAYLTAELStPDGSVADGEILDNK (N) T(0.0)GNAY(0.0)LT(0.0)AELS(0.0)T(0.99)PDGS(0.0)VADGEILDNK K:TMT10,t:Phosphorylated T TRIM2 85627.1 2 1 2827.1 69.05 HUMAN 1 -7.0143 32.1944 YLVIKRESGPGIAPG-p P21860;S982-p YLVIKRESGPGIAPG 0.11362075282554 0.00635603975750132 0.310666666666667 1.19633333333333 19.7064769888107 31.6291774916109 0.310666666666667 1.19633333333333 0.0106992245191494 0.000687198575923532 3.81623842031237 6.93175166697351 P21860 ERBB3 P21860.S982.p_ERBB3 P21860_S982s _1_1_982_982 P21860 P21860|P21860-4|P21860-5 Receptor tyrosine-protein kinase erbB-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.10491.10491.4 22.39 22.39 15.445 2 1 1 0 613.8239 2372.3087 S982s TMT10 980 (K) REsGPGIAPGPEPHGLTNK (K) RES(0.99)GPGIAPGPEPHGLT(0.0)NK K:TMT10,s:Phosphorylated S ERBB3 151518.9 3 2 1255.1 161.59 HUMAN 1 19.7065 31.6292 YLVKEGGSYGFSLKT-p Q5T2W1;S144-p YLVKEGGSYGFSLKT 0.905292745820879 0.918616948831845 0.0213333333333333 0.0143333333333333 0.851262256727276 0.519261029056937 0.0213333333333333 0.0143333333333333 0.822003703668334 0.887306978333977 0.236141400943198 0.148510533843026 Q5T2W1 PDZK1 Q5T2W1.S144.p_PDZK1 Q5T2W1_S144s _1_1_144_144 Q5T2W1 Q5T2W1|Q5T2W1-2 Na(+)/H(+) exchange regulatory cofactor NHE-RF3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.20047.20047.2 15.43 8.47 4.324 3 1 1 0 791.899 1502.8255 S144s TMT10 141 (K) EGGsYGFSLK (T) EGGS(0.99)Y(0.0)GFS(0.0)LK K:TMT10,s:Phosphorylated S PDZK1 57413.6 4 5 1301.1 156.33 HUMAN 1 0.8513 0.5193 YLYEKANTPELKKSV-p Q9H8V3;T359-p YLYEKANTPELKKSV 0.565856073226583 0.00117984223282173 -0.0923333333333334 -1.00966666666667 4.55612843531991 48.3793848581251 -0.0923333333333334 -1.00966666666667 0.350257268488506 1.45231731164196e-05 -1.02204950095728 -14.6280051263285 Q9H8V3 ECT2 Q9H8V3.T359.p_ECT2 Q9H8V3_T359t _1_1_359_359 Q9H8V3 Q9H8V3-3|Q9H8V3-4|Q9H8V3-2 Protein ECT2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.9959.9959.2 11.65 11.65 99 1 1 1 0 834.4882 1588.0037 T359t TMT10 357 (K) ANtPELKK (S) ANT(1.0)PELKK K:TMT10,t:Phosphorylated T ECT2 104530 10 4 572.1 269.2 HUMAN 1 -4.5561 -48.3794 YLYMEYHSPDDNRMN-p F6SS63;S60-p YLYMEYHSPDDNRMN 0.393841293756292 0.0249815659733294 -0.151333333333333 -0.337666666666667 7.46848503963584 21.8000048381743 -0.151333333333333 -0.337666666666667 0.179123058453573 0.00660692711975148 -1.54279513944287 -4.27188023093567 F6SS63 NotFound F6SS63.S60.p_NotFound F6SS63_S60s _1_1_60_60 F6SS63 Q8N5C8|Q8N5C8-2|F6SS63 TAK1-binding protein 3, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13472.13472.4 16.32 16.32 2.472 4 1 1 0 604.0125 2333.0641 S60s TMT10 53 (K) YLYMEYHsPDDNRMNR (N) Y(0.0)LY(0.0)MEY(0.0)HS(0.99)PDDNRMNR s:Phosphorylated S TAB3 67485.4 2 1 1606.1 128.05 HUMAN 1 -7.4685 -21.8 YLYSKYYSDSDDELT-p Q8NFC6;S482-p YLYSKYYSDSDDELT 0.20723923054376 0.0287364140753234 -0.256 0.282666666666667 13.2127878938823 20.8735945140349 -0.256 0.282666666666667 0.0477222828657277 0.0081778765173666 -2.54948180379741 4.06497461187737 Q8NFC6 BOD1L1 Q8NFC6.S482.p_BOD1L1 Q8NFC6_S482s _1_1_482_482 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.12274.12274.3 15.13 15.13 1.772 5 1 1 0 728.9901 2104.9985 S482s TMT10 480 (K) YYsDSDDELTVEQRR (Q) Y(0.0)Y(0.0)S(0.99)DS(0.0)DDELT(0.0)VEQRR s:Phosphorylated S BOD1L1 332628.7 3 3 97.1 603.4 HUMAN 1 -13.2128 20.8736 YMGLDFNSLPYQVPT-p Q13137-4;S379-p YMGLDFNSLPYQVPT 0.624077384181967 0.536289359676561 -0.0686666666666667 0.059 3.80455423192172 3.64117221646256 -0.0686666666666667 0.059 0.416432462247921 0.432397105762774 -0.879580643563573 0.847751885352208 Q13137 CALCOCO2 Q13137.4.S379.p_CALCOCO2 Q13137-4_S379s _1_1_379_379 Q13137-4 Q13137-4|Q13137-3|Q13137-2|Q13137-5 Isoform 4 of Calcium-binding and coiled-coil domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36534.36534.3 27.66 24.75 5.035 6 1 1 0 1013.8189 2959.4709 S379s TMT10 369 (R) LLSYMGLDFNsLPYQVPTSDEGGAR (Q) LLS(0.0)Y(0.0)MGLDFNS(0.99)LPY(0.0)QVPT(0.0)S(0.0)DEGGAR s:Phosphorylated S CALCOCO2 55986 3 3 1533.1 133.47 HUMAN 1 -3.8046 3.6412 YMLERRKTDTVVESS-p Q9NXL2;T34-p YMLERRKTDTVVESS 0.249157518555538 0.0842923711703691 0.203666666666667 0.264 11.5167881948368 14.2209301177038 0.203666666666667 0.264 0.070521441428889 0.0378361543287321 2.24690759040855 2.73190230106638 Q9NXL2 ARHGEF38 Q9NXL2.T34.p_ARHGEF38 Q9NXL2_T34t _1_1_34_34 Q9NXL2 Q9NXL2|Q9NXL2-1 Rho guanine nucleotide exchange factor 38 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6324.6324.5 23.39 23.39 2.393 7 1 1 0 565.8993 2745.5008 T34t TMT10 32 (R) RKtDTVVESSVSGDHSGTLRR (S) RKT(0.99)DT(0.0)VVES(0.0)S(0.0)VS(0.0)GDHS(0.0)GT(0.0)LRR K:TMT10,t:Phosphorylated T ARHGEF38 89988.8 3 1 2438.1 83.38 HUMAN 1 11.5168 14.2209 YMNPGDQSPADSNKT-p Q92754;S434-p YMNPGDQSPADSNKT 0.915196161002606 0.959283227928085 0.0173333333333333 -0.00566666666666663 0.754744903105239 0.260056783653932 0.0173333333333333 -0.00566666666666663 0.840476373745222 0.941877281472692 0.211174361894502 -0.0763519757053544 Q92754 TFAP2C Q92754.S434.p_TFAP2C Q92754_S434s _1_1_434_434 Q92754 Q92754|Q92754-2 Transcription factor AP-2 gamma HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.10890.10902.3 18.18 18.18 6.684 4 1 1 0 716.9953 2069.001 S434s TMT10 426 (K) SYMNPGDQsPADSNK (T) S(0.0)Y(0.0)MNPGDQS(0.99)PADS(0.0)NK K:TMT10,s:Phosphorylated S TFAP2C 49632.3 13 1 2051.2 100.4 HUMAN 1 0.7547 -0.2601 YMPPRSRSRDDLYDQ-p Q86X29-6;S374-p YMPPRSRSRDDLYDQ 0.696532260940968 0.627361098295866 0.0623333333333333 0.048 2.95183042449806 2.75433942278729 0.0623333333333333 0.048 0.50677707151102 0.530354255245863 0.710611418507942 0.669968664783246 Q86X29 LSR Q86X29.6.S374.p_LSR Q86X29-6_S374s _1_1_374_374 Q86X29-6 Q86X29|Q86X29-4|Q86X29-3|S4R3V8|Q86X29-2|Q86X29-5|Q86X29-6 Isoform 6 of Lipolysis-stimulated lipoprotein receptor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.8594.9007.3 23.87 23.87 9.183 3 1 1 0 693.953 1999.874 S374s Hydrogen 374 (R) sRDDLYDQDDSRDFPR (S) S(0.99)RDDLY(0.0)DQDDS(0.0)RDFPR s:Phosphorylated S LSR 54725.6 15 12 206.1 448.79 HUMAN 1 2.9518 2.7543 YNADEARSLKAYGEL-p P47813;S102-p YNADEARSLKAYGEL 0.112507468607091 0.548330273366323 -0.442666666666667 0.107666666666667 19.815720062931 3.50968993411588 -0.442666666666667 0.107666666666667 0.0104334513112055 0.445688067298583 -3.83951305202189 0.822036832340801 P47813 EIF1AX P47813.S102.p_EIF1AX P47813_S102s _1_1_102_102 P47813 P47813|O14602|A6NJH9|X6RAC9 Eukaryotic translation initiation factor 1A, X-chromosomal HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9233.9233.3 12.48 12.48 6.816 2 1 1 0 568.9611 1624.9059 S102s TMT10 95 (K) YNADEARsLK (A) Y(0.0)NADEARS(0.99)LK K:TMT10,s:Phosphorylated S EIF1AX 16574.2 1 2 5082.1 23.17 HUMAN 1 -19.8157 3.5097 YNADYDLSARQGADT-p Q13505;S235-p YNADYDLSARQGADT 0.276585410650695 0.00248584650157384 -0.325 -0.957333333333333 10.5552635346359 39.8646302122669 -0.325 -0.957333333333333 0.0879981711815586 0.000103166091829704 -2.07836585107253 -10.0706390106622 Q13505 MTX1 Q13505.S235.p_MTX1 Q13505_S235s _1_1_235_235 Q13505 Q13505|A0A0A0MRK6 Metaxin-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.34514.34514.4 17.1 17.1 1.153 5 1 1 0 840.6658 3279.6608 S235s TMT10 228 (K) YNADYDLsARQGADTLAFMSLLEEK (L) Y(0.0)NADY(0.0)DLS(0.99)ARQGADT(0.0)LAFMS(0.0)LLEEK K:TMT10,s:Phosphorylated S MTX1 51704.1 2 2 4134.1 36.87 HUMAN 1 -10.5553 -39.8646 YNASMADSPGEESFE-p Q92636-2;S627-p YNASMADSPGEESFE 0.990440674560662 0.582942681813655 -0.00200000000000001 0.0546666666666667 0.0854875106056618 3.16415346401612 -0.00200000000000001 0.0546666666666667 0.980508242696102 0.482597039727315 -0.0255812451927902 0.753451870577899 Q92636 NSMAF Q92636.2.S627.p_NSMAF Q92636-2_S627s _1_1_627_627 Q92636-2 Q92636-2 Isoform 2 of Protein FAN HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.23975.23975.3 25.64 25.64 3.916 11 1 1 0 1222.2091 3584.6474 S627s TMT10 613 (K) SLSQTSSYNASMADsPGEESFEDLTEESK (T) S(0.0)LS(0.0)QT(0.0)S(0.0)S(0.0)Y(0.0)NAS(0.0)MADS(0.99)PGEES(0.0)FEDLT(0.0)EES(0.0)K K:TMT10,s:Phosphorylated S NSMAF 108452.7 1 3 4202.1 35.52 HUMAN 1 -0.0855 3.1642 YNENTRRSQLLMLFD-p Q12980;S538-p YNENTRRSQLLMLFD 0.133183399576842 0.337210197066267 -0.264 -0.146 18.0409324450886 6.25514015869503 -0.264 -0.146 0.0157002567826728 0.236856869036766 -3.47055395554722 -1.32956112399238 Q12980 NPRL3 Q12980.S538.p_NPRL3 Q12980_S538s _1_1_538_538 Q12980 Q12980|B7Z6Q0 GATOR complex protein NPRL3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.28682.28682.2 11.33 8.7 99 1 1 1 0 702.3661 1323.7544 S538s Hydrogen 538 (R) sQLLMLFDK (F) S(1.0)QLLMLFDK K:TMT10-Lys-Only,s:Phosphorylated S NPRL3 64174.4 2 5 3067.1 61.64 HUMAN 1 -18.0409 -6.2551 YNESLLYSPEEPKIL-p Q4G0N4;S367-p YNESLLYSPEEPKIL 0.530246418651222 0.00774620725295617 -0.0893333333333333 0.464 5.09967042752833 30.1336875296336 -0.0893333333333333 0.464 0.309052995424753 0.00096968627145916 -1.12229225602915 6.46259785756079 Q4G0N4 NADK2 Q4G0N4.S367.p_NADK2 Q4G0N4_S367s _1_1_367_367 Q4G0N4 Q4G0N4|Q4G0N4-2|B7Z8V7|Q4G0N4-3|A0A0C4DGV3 NAD kinase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.21223.21223.3 17.97 17.29 1.286 5 1 1 0 850.7523 2470.2754 S367s TMT10 356 (K) VTNEYNESLLYsPEEPK (I) VT(0.0)NEY(0.0)NES(0.0)LLY(0.0)S(0.99)PEEPK K:TMT10,s:Phosphorylated S NADK2 50002.6 2 2 4093.1 37.79 HUMAN 1 -5.0997 30.1337 YNGRGWGSPGRPKKK-p A7E2V4-4;S1135-p YNGRGWGSPGRPKKK 0.323069540271988 0.164633190168544 -0.145666666666667 -0.182666666666667 9.18507836446677 10.30168760895 -0.145666666666667 -0.182666666666667 0.120640231957424 0.0932891721392857 -1.84040566947334 -2.03332573828937 A7E2V4 ZSWIM8 A7E2V4.4.S1135.p_ZSWIM8 A7E2V4-4_S1135s _1_1_1135_1135 A7E2V4-4 A7E2V4-2|A7E2V4-4|A7E2V4-3|S4R410|A7E2V4-5|S4R393 Isoform 4 of Zinc finger SWIM domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.8068.8068.3 10.03 10.03 99 1 1 1 0 613.0203 1757.0789 S1135s TMT10 1132 (R) GWGsPGRPKK (K) GWGS(1.0)PGRPKK K:TMT10,s:Phosphorylated S ZSWIM8 199945.4 8 11 805.1 222.5 HUMAN 1 -9.1851 -10.3017 YNISGNGSPLADSKE-p Q53HL2;S219-p YNISGNGSPLADSKE 0.258337293578794 0.00297589273654222 -0.376666666666667 -0.692666666666667 11.1685539072842 38.0569561655616 -0.376666666666667 -0.692666666666667 0.0764090164263509 0.000156424358803485 -2.1856652230228 -9.29083568710407 Q53HL2 CDCA8 Q53HL2.S219.p_CDCA8 Q53HL2_S219s _1_1_219_219 Q53HL2 Q53HL2 Borealin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.20218.20218.2 19.07 15.15 3.905 4 1 1 0 1037.5349 1994.0959 S219s TMT10 211 (R) IYNISGNGsPLADSK (E) IY(0.0)NIS(0.0)GNGS(0.99)PLADS(0.0)K K:TMT10,s:Phosphorylated S CDCA8 31436.5 15 4 2168.1 94.69 HUMAN 1 -11.1686 -38.057 YNLINEGSPPSKIMK-p Q68D06;S170-p YNLINEGSPPSKIMK 0.965158113768205 0.0126194878977549 0.00666666666666666 -0.484 0.296190831421457 26.4794589154141 0.00666666666666667 -0.484 0.934073211136024 0.00224933483149879 0.0866402295678477 -5.42120975975338 Q68D06 SLFN13 Q68D06.S170.p_SLFN13 Q68D06_S170s _1_1_170_170 Q68D06 Q68D06 Schlafen family member 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.17961.18165.2 16.67 16.67 3.118 3 1 1 0 928.981 1776.9896 S170s TMT10 163 (K) YNLINEGsPPSK (I) Y(0.0)NLINEGS(0.99)PPS(0.0)K K:TMT10,s:Phosphorylated S SLFN13 103526.1 6 2 5136.1 22.53 HUMAN 1 0.2962 -26.4795 YNLPRSYSHDVLPKV-p Q13480-2;S266-p YNLPRSYSHDVLPKV 0.105022846104619 0.807585944774569 0.342666666666667 0.0406666666666667 20.6252752343908 1.29882380551057 0.342666666666667 0.0406666666666667 0.00865909444557646 0.741511036645775 4.014444773261 0.347206492312274 Q13480 GAB1 Q13480.2.S266.p_GAB1 Q13480-2_S266s _1_1_266_266 Q13480-2 Q13480-2|B7Z3B9 Isoform 2 of GRB2-associated-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.12198.12198.2 13.62 9.33 2.555 3 1 1 0 792.4147 1503.8572 S266s TMT10 264 (R) SYsHDVLPK (V) S(0.0)Y(0.0)S(0.99)HDVLPK K:TMT10,s:Phosphorylated S GAB1 80631.3 2 4 368.1 340.82 HUMAN 1 20.6253 1.2988 YNLRHAHSLGSLDAS-p Q96JN0-3;S1048-p YNLRHAHSLGSLDAS 0.794385697846618 0.0377558507873522 0.056 -0.323666666666667 1.92934383155629 19.1171251600262 0.056 -0.323666666666667 0.641306463212476 0.0122542711011927 0.493097241196283 -3.68872649241491 Q96JN0 LCOR Q96JN0.3.S1048.p_LCOR Q96JN0-3_S1048s _1_1_1048_1048 Q96JN0-3 Q96JN0-3 Isoform 3 of Ligand-dependent corepressor HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.7686.7686.3 13.26 10.12 1.941 3 1 1 0 587.6423 1680.9433 S1048s TMT10 1045 (R) HAHsLGSLDASK (V) HAHS(0.99)LGS(0.0)LDAS(0.0)K K:TMT10,s:Phosphorylated S LCOR 172300.7 1 13 673.1 247.79 HUMAN 1 1.9293 -19.1171 YNNFSGNSLPEYPTV-p Q969E2-2;S178-p YNNFSGNSLPEYPTV 0.960395582779587 0.0790882987832723 0.00733333333333333 0.198 0.337700064485007 14.6242954274821 0.00733333333333333 0.198 0.925188005032049 0.0344802540668343 0.0983590673395535 2.80650460001026 Q969E2 SCAMP4 Q969E2.2.S178.p_SCAMP4 Q969E2-2_S178s _1_1_178_178 Q969E2-2 Q969E2|Q969E2-2 Isoform 2 of Secretory carrier-associated membrane protein 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.31348.31348.3 17.5 17.5 1.73 8 1 1 0 1132.5082 3315.5432 S178s TMT10 168 (R) EAQYNNFSGNsLPEYPTVPSYPGSGQWP (-) EAQY(0.0)NNFS(0.0)GNS(0.99)LPEY(0.0)PT(0.0)VPS(0.0)Y(0.0)PGS(0.0)GQWP s:Phosphorylated S SCAMP4 22332.5 3 3 4009.1 39.16 HUMAN 1 0.3377 14.6243 YNNHEIRSGKHIGVC-p O60506;S230-p YNNHEIRSGKHIGVC 0.864241432695153 0.133586355606305 0.0286666666666667 0.256 1.23585517666167 11.5247128628459 0.0286666666666666 0.256 0.752340570923632 0.0703928767192573 0.332036933443372 2.24723483210994 O60506 SYNCRIP O60506.S230.p_SYNCRIP O60506_S230s _1_1_230_230 O60506 O60506|O60506-2|O60506-3|O60506-4|B7Z645 Heterogeneous nuclear ribonucleoprotein Q HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7487.7487.4 7.32 7.32 7.319 2 1 1 0 468.0003 1789.0121 S230s TMT10 222 (K) LYNNHEIRsGK (H) LY(0.0)NNHEIRS(0.99)GK K:TMT10,s:Phosphorylated S SYNCRIP 69829.6 1 11 1376.1 148.68 HUMAN 1 1.2359 11.5247 YNNLNLKTPVPSDID-p F5H2F4;T370-p YNNLNLKTPVPSDID 0.757201638201782 0.33706197113581 0.043 -0.117 2.31246919852699 6.25833519890956 0.043 -0.117 0.587155428060931 0.236682681026047 0.576940145141319 -1.33012691677815 F5H2F4 NotFound F5H2F4.T370.p_NotFound F5H2F4_T370t _1_1_370_370 F5H2F4 F5H2F4|P11586 C-1-tetrahydrofolate synthase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.29159.29159.4 17.19 17.19 6.347 4 1 1 0 789.6655 3075.6701 T370t TMT10 359 (K) WMIQYNNLNLKtPVPSDIDISR (S) WMIQY(0.0)NNLNLKT(0.99)PVPS(0.0)DIDIS(0.0)R K:TMT10,t:Phosphorylated T MTHFD1 111409.8 2 3 1887.1 109.02 HUMAN 1 2.3125 -6.2583 YNNSQAPSPGLGSKA-p Q9UHB7;S1043-p YNNSQAPSPGLGSKA 0.260738445460444 0.0260426411943007 0.181666666666667 0.311666666666667 11.0628831888416 21.5448214076309 0.181666666666667 0.311666666666667 0.0782909713066978 0.00700676995801549 2.16712961592939 4.21427244530501 Q9UHB7 AFF4 Q9UHB7.S1043.p_AFF4 Q9UHB7_S1043s_1_1_1043_1043 Q9UHB7 Q9UHB7 AF4/FMR2 family member 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.11857.11857.3 18.87 18.87 3.634 5 1 1 0 720.6843 2079.0871 N1034n S1043s TMT10 1034 (K) nSYNNSQAPsPGLGSK (A) N(0.99)S(0.0)Y(0.0)N(0.0)N(0.0)S(0.0)QAPS(0.99)PGLGS(0.0)K K:TMT10,n:Deamidated,s:Phosphorylated S AFF4 127856.3 4 21 137.1 525.98 HUMAN 1 11.0629 21.5448 YNPVLRKSCPIPLFV-p Q8N412;S413-p YNPVLRKSCPIPLFV 0.186631283974087 0.0977373280802448 -0.272333333333333 -0.240666666666667 14.3302044100059 13.3537337085274 -0.272333333333333 -0.240666666666667 0.036896023225736 0.0461983674865962 -2.75374872529369 -2.57354932462152 Q8N412 STPG2 Q8N412.S413.p_STPG2 Q8N412_S413sS423s_2_2_413_423 Q8N412 Q8N412 Sperm-tail PG-rich repeat-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.16844.16844.4 7.08 0.28 7.08 4 2 2 0 1205.6689 4658.6903 N407n S413s S423s TMT10 393 (R) CLEKVTDGPGPAAYnPVLRKsCPIPLFVKAsK (R) CLEKVT(0.0)DGPGPAAY(0.0)N(1.0)PVLRKS(0.99)CPIPLFVKAS(0.99)K C:Carbamidomethylation,K:TMT10,n:Deamidated,s:Phosphorylated S STPG2 51115.5 2 1 6229.1 12.99 HUMAN 1 -14.3302 -13.3537 YNPWRIWSPTIGRRS-p Q92545;S1863-p YNPWRIWSPTIGRRS 0.972086932110301 0.0076247943767619 0.00600000000000001 -0.468666666666667 0.238606639273964 30.2370874236565 0.00600000000000002 -0.468666666666667 0.946540794333037 0.000946871963887699 0.0702198103478393 -6.49418256534716 Q92545 TMEM131 Q92545.S1863.p_TMEM131 Q92545_S1863s _1_1_1863_1863 Q92545 Q92545 Transmembrane protein 131 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.21284.21284.2 9.44 9.44 1.463 2 1 1 0 619.8298 1158.6833 S1863s TMT10 1861 (R) IWsPTIGR (R) IWS(0.99)PT(0.0)IGR s:Phosphorylated S TMEM131 205932.9 4 11 789.1 224.94 HUMAN 1 0.2386 -30.2371 YNRDNSISPESDVDT-p Q5SW79;S930-p YNRDNSISPESDVDT 0.779056963761954 0.0271060514555545 -0.0586666666666667 0.403666666666667 2.08210211343195 21.2615591059525 -0.0586666666666666 0.403666666666667 0.619141319870734 0.00747900957802348 -0.526908337269655 4.15087781016557 Q5SW79 CEP170 Q5SW79.S930.p_CEP170 Q5SW79_S928sS930s_2_2_928_930 Q5SW79 Q5SW79|Q5SW79-3|Q5SW79-2 Centrosomal protein of 170 kDa HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.20491.20491.5 9.79 9.79 1.389 13 2 2 0 1138.1465 5526.7563 S928s S930s TMT10 908 (K) LREDNKTDEGPDTPSYNRDNsIsPESDVDTASTISLVTGETERK (S) LREDNKT(0.0)DEGPDT(0.0)PS(0.0)Y(0.0)NRDNS(0.99)IS(0.99)PES(0.0)DVDT(0.0)AS(0.0)T(0.0)IS(0.0)LVT(0.0)GET(0.0)ERK K:TMT10,s:Phosphorylated S CEP170 175689.3 2 31 128.1 537.52 HUMAN 1 -2.0821 21.2616 YNWNVRKT_______-p O14647;T1828-p YNWNVRKT_______ 0.146674740935683 0.260030158002616 0.252666666666667 -0.148666666666667 16.9383745670132 7.70670696985993 0.252666666666667 -0.148666666666667 0.0202377647532194 0.169562301624828 3.25050697430049 -1.58375426233089 O14647 CHD2 O14647.T1828.p_CHD2 O14647_T1828t _1_1_1828_1828 O14647 O14647 Chromodomain-helicase-DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.12261.12261.4 9.71 9.71 4.495 2 1 1 0 515.5093 1979.0499 T1828t TMT10 1817 (K) NNPDYNWNVRKt (-) NNPDY(0.0)NWNVRKT(0.99) K:TMT10,t:Phosphorylated T CHD2 212309.6 1 10 482.1 298.11 HUMAN 1 16.9384 -7.7067 YNYHLDSSGSYVFEN-p P49588-2;S502-p YNYHLDSSGSYVFEN 0.594218535558287 0.0665963981085487 -0.088 0.221 4.16876422273365 15.6474553024405 -0.088 0.221 0.382933690920073 0.0272429711043823 -0.949254669148449 2.99872568336636 P49588 AARS P49588.2.S502.p_AARS P49588-2_S502s _1_1_502_502 P49588-2 P49588-2 Isoform 2 of Alanine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.34684.34684.3 17.53 17.53 1.201 8 1 1 0 1016.1431 2966.4556 S502s TMT10 495 (K) YNYHLDSsGSYVFENTVATVMALR (R) Y(0.0)NY(0.0)HLDS(0.0)S(0.99)GS(0.0)Y(0.0)VFENT(0.0)VAT(0.0)VMALR s:Phosphorylated S AARS 110057.1 1 2 2191.1 93.87 HUMAN 1 -4.1688 15.6475 YNYRRSYSPRNSRPT-p O75494-3;S143-p YNYRRSYSPRNSRPT 0.187863102695022 0.0173466063749784 0.261 0.397333333333333 14.2510584615427 24.2887147209552 0.261 0.397333333333333 0.0375745816441431 0.00372501930562605 2.73913082729024 4.86001442110956 O75494 SRSF10 O75494.3.S143.p_SRSF10 O75494-3_S143s_1_1_143_143 O75494-3 O75494|O75494-3|O75494-4 Isoform 3 of Serine/arginine-rich splicing factor 10 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.3160.3160.5 11.59 11.59 1.1 5 1 1 0 388.9999 1860.015 S143s N146n TMT10 141 (R) SYsPRnSRPTGRPR (R) S(0.0)Y(0.0)S(0.99)PRN(1.0)S(0.0)RPT(0.0)GRPR s:Phosphorylated S,n:Deamidated SRSF10 22336.2 3 15 867.2 210.03 HUMAN 1 14.2511 24.2887 YPAPYNITPNRMLAQ-p Q15434;T269-p YPAPYNITPNRMLAQ 0.75263687405577 0.735635553476966 0.0553333333333333 -0.0383333333333333 2.35509469799514 1.83841899046459 0.0553333333333333 -0.0383333333333333 0.581420754279518 0.654874531791825 0.586079445229367 -0.47266050435293 Q15434 RBMS2 Q15434.T269.p_RBMS2 Q15434_T269t_1_1_269_269 Q15434 Q15434 RNA-binding motif, single-stranded-interacting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.34920.34920.4 22.49 17.4 2.913 7 1 1 0 957.4495 3745.8192 N259n T269t TMT10 241 (R) NADMGVMALTYDPTTALQnGFYPAPYNItPNR (M) N(0.0)ADMGVMALT(0.0)Y(0.0)DPT(0.0)T(0.0)ALQN(0.99)GFY(0.0)PAPY(0.0)N(0.0)IT(0.99)PN(0.0)R n:Deamidated,t:Phosphorylated T RBMS2 44186.1 2 3 2184.1 94.14 HUMAN 1 2.3551 -1.8384 YPDYMYGSPGELRDR-p P31274;S145-p YPDYMYGSPGELRDR 0.374814805489608 0.00598251112062974 0.154 0.505333333333333 7.89068867056673 32.1062806647704 0.154 0.505333333333333 0.16252910092499 0.000615703941126029 1.61619213564251 7.0871733621773 P31274 HOXC9 P31274.S145.p_HOXC9 P31274_S145s _1_1_145_145 P31274 P31274 Homeobox protein Hox-C9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.15890.15890.3 14.63 14.63 2.41 5 1 1 0 738.9958 2135.0065 S145s TMT10 137 (R) SYPDYMYGsPGELRDR (A) S(0.0)Y(0.0)PDY(0.0)MY(0.0)GS(0.99)PGELRDR s:Phosphorylated S HOXC9 29475.7 1 1 3583.1 47.71 HUMAN 1 7.8907 32.1063 YPEPADFSQDPPKPS-p Q9UP52;S305-p YPEPADFSQDPPKPS 0.771982430720165 0.314189355223137 0.09 0.128333333333333 2.15047897252633 6.64562581631983 0.09 0.128333333333333 0.609469676646534 0.216489789605455 0.541874687349715 1.3984609026083 Q9UP52 TFR2 Q9UP52.S305.p_TFR2 Q9UP52_S279sT285tS305s_3_3_279_305 Q9UP52 Q9UP52 Transferrin receptor protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.37914.37914.5 8.69 1.87 1.264 4 3 3 0 907.4232 4292.2643 S279s T285t N286n S305s Hydrogen 275 (R) VGVIsFAQKVtnAQDFGAQGVLIYPEPADFsQDPPK (P) VGVIS(0.99)FAQKVT(0.99)N(1.0)AQDFGAQGVLIY(0.0)PEPADFS(0.99)QDPPK K:TMT10-Lys-Only,s:Phosphorylated S,t:Phosphorylated T,n:Deamidated TFR2 89038.7 1 1 6074.1 14.18 HUMAN 1 2.1505 6.6456 YPERRAISPTSSSRY-p B1AM27;S266-p YPERRAISPTSSSRY 0.263920652188996 0.0391240661714543 -0.313 -0.406 10.9738425574067 18.8978311645654 -0.313 -0.406 0.0799126889401009 0.0128889305492907 -2.15152740144548 -3.64313181766841 B1AM27 NotFound B1AM27.S266.p_NotFound B1AM27_S266s _1_1_266_266 B1AM27 B1AM27 Protein unc-13 homolog B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.3614.3614.3 8.1 8.1 2.535 5 1 1 0 457.571 1290.7327 S266s TMT10 263 (R) RAIsPTSSSR (Y) RAIS(0.99)PT(0.0)S(0.0)S(0.0)S(0.0)R s:Phosphorylated S UNC13B 186511.5 1 8 68.3 675.08 HUMAN 1 -10.9738 -18.8978 YPFARHQSAEFTISY-p Q8N8Z6;S513-p YPFARHQSAEFTISY 0.31168959521091 0.0148077240954323 -0.17 -0.422666666666667 9.47199065918198 25.3327956928232 -0.17 -0.422666666666667 0.11292781730615 0.00292900714243579 -1.89010420703437 -5.12205633395549 Q8N8Z6 DCBLD1 Q8N8Z6.S513.p_DCBLD1 Q8N8Z6_S513s _1_1_513_513 Q8N8Z6 Q8N8Z6|Q8N8Z6-2 Discoidin, CUB and LCCL domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.14470.14470.2 16.38 16.38 3.554 4 1 1 0 1104.0228 2127.0759 S513s TMT10 511 (R) HQsAEFTISYDNEK (E) HQS(0.99)AEFT(0.0)IS(0.0)Y(0.0)DNEK K:TMT10,s:Phosphorylated S DCBLD1 78660.8 3 1 5213.1 21.72 HUMAN 1 -9.472 -25.3328 YPGGSDNYGSLSRVT-p O60716;Y228-p YPGGSDNYGSLSRVT 0.908351461676759 0.0481654416923262 0.0223333333333333 0.237666666666667 0.821479956674446 17.6145933999455 0.0223333333333333 0.237666666666667 0.82766007176125 0.0173197117570916 0.228478922090459 3.38198777378665 O60716 CTNND1 O60716.Y228.p_CTNND1 O60716_Y228y _1_1_228_228 O60716 O60716|O60716-2|O60716-9|O60716-8|O60716-10|O60716-12|O60716-14|O60716-11|O60716-4|O60716-6|O60716-3|C9JZR2|O60716-5|O60716-7|O60716-13|O60716-17|O60716-15|O60716-18|O60716-16|O60716-20 Catenin delta-1 GG20160819_MSz_CCLE_T4D7_pY_Injection_02.10306.10306.3 20.27 17.51 3.314 6 1 1 0 761.6558 2202.989 Y228y TMT10 216 (R) HYEDGYPGGSDNyGSLSR (V) HY(0.0)EDGY(0.0)PGGS(0.0)DNY(0.99)GS(0.0)LS(0.0)R y:Phosphorylated Y CTNND1 108738.6 2 2 51.1 43.85 HUMAN 1 0.8215 17.6146 YPGSSKPSPIYISSY-p Q99569;S1091-p YPGSSKPSPIYISSY 0.863288865664684 0.111567661524873 0.0303333333333333 0.260666666666667 1.24508269750032 12.5739501349312 0.0303333333333333 0.260666666666667 0.750743758468968 0.0552847037236948 0.334273260679965 2.43328784558095 Q99569 PKP4 Q99569.S1091.p_PKP4 Q99569_S1091s _1_1_1091_1091 Q99569 A0A0D9SF60|Q99569 Plakophilin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.20474.20474.4 15.54 15.54 2.477 10 1 1 0 713.8719 2772.4973 S1091s TMT10 1082 (K) GLYPGSSKPsPIYISSYSSPAR (E) GLY(0.0)PGS(0.0)S(0.0)KPS(0.99)PIY(0.0)IS(0.0)S(0.0)Y(0.0)S(0.0)S(0.0)PAR K:TMT10,s:Phosphorylated S PKP4 132664.7 3 26 122.1 546.31 HUMAN 1 1.2451 12.574 YPKTAGNSEFLGKTP-p P78344;S36-p YPKTAGNSEFLGKTP 0.572595397397121 0.877041528224484 -0.096 -0.0196666666666666 4.45954187744191 0.800474465228505 -0.096 -0.0196666666666666 0.35813421347687 0.831672906160186 -1.00401376171804 -0.223031018594485 P78344 EIF4G2 P78344.S36.p_EIF4G2 P78344_S36s _1_1_36_36 P78344 P78344|P78344-2|H0Y3P2 Eukaryotic translation initiation factor 4 gamma 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.15859.15859.2 10.97 10.97 4.677 2 1 1 0 781.4048 1481.8364 S36s TMT10 32 (K) TAGNsEFLGK (T) T(0.0)AGNS(0.99)EFLGK K:TMT10,s:Phosphorylated S EIF4G2 102873.5 1 3 1107.1 176.26 HUMAN 1 -4.4595 -0.8005 YPKTPTGSPATEVSA-p Q8NHM5;S497-p YPKTPTGSPATEVSA 0.451048552802647 0.0386745972221711 -0.108666666666667 0.294666666666667 6.38359633472722 18.970247528081 -0.108666666666667 0.294666666666667 0.229953681297355 0.0126757961753211 -1.35262219252714 3.65815598879795 Q8NHM5 KDM2B Q8NHM5.S497.p_KDM2B Q8NHM5_S497s _1_1_497_497 Q8NHM5 Q8NHM5|Q8NHM5-3|Q8NHM5-2|Q8NHM5-4|F6SRV7|Q8NHM5-5|S4R3G4 Lysine-specific demethylase 2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.18805.18805.4 19.66 18.4 1.628 9 1 1 0 772.9163 3008.6759 S497s TMT10 483 (K) STTLAVDYPKTPTGsPATEVSAK (W) S(0.0)T(0.0)T(0.0)LAVDY(0.0)PKT(0.0)PT(0.0)GS(0.99)PAT(0.0)EVS(0.0)AK K:TMT10,s:Phosphorylated S KDM2B 155065.3 4 5 800.1 223.19 HUMAN 1 -6.3836 18.9702 YPKVKAQTPPGPSLS-p Q9UQ35;T1003-p YPKVKAQTPPGPSLS 0.220753787202438 0.0663237648970321 0.182333333333333 0.231 12.6305972836574 15.6744179172672 0.182333333333333 0.231 0.0545682808367713 0.0270743605591155 2.44471069805587 3.0038525955218 Q9UQ35 SRRM2 Q9UQ35.T1003.p_SRRM2 Q9UQ35_T1003t _1_1_1003_1003 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.12251.12456.3 19.34 15.36 6.893 4 1 1 0 741.0901 2141.2897 T1003t TMT10 999 (K) VKAQtPPGPSLSGSK (S) VKAQT(0.99)PPGPS(0.0)LS(0.0)GS(0.0)K K:TMT10,t:Phosphorylated T SRRM2 300351.7 13 47 2.1 3310.34 HUMAN 1 12.6306 15.6744 YPLRQTRSSGSETEQ-p O95251;S99-p YPLRQTRSSGSETEQ 0.165786190720078 0.264450621478084 -0.281666666666667 -0.112333333333333 15.6098758235485 7.60917570421274 -0.281666666666667 -0.112333333333333 0.0274797272389656 0.173413310692504 -2.9936357195943 -1.56680866804894 O95251 KAT7 O95251.S99.p_KAT7 O95251_S99s _1_1_99_99 O95251 O95251|O95251-4 Histone acetyltransferase KAT7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15009.15009.3 15.86 10.3 2.154 6 1 1 0 847.0694 2459.2302 S99s TMT10 99 (R) sSGSETEQVVDFSDRETK (N) S(0.99)S(0.0)GS(0.0)ET(0.0)EQVVDFS(0.0)DRET(0.0)K K:TMT10,s:Phosphorylated S KAT7 71325.8 5 7 691.1 243.06 HUMAN 1 -15.6099 -7.6092 YPLRRSQSLPTTLLS-p P28290;S739-p YPLRRSQSLPTTLLS 0.996421434325015 0.651476596632614 -0.000666666666666667 0.0516666666666667 0.0289667850045882 2.54067321444295 -0.000666666666666667 0.0516666666666667 0.993352345335606 0.557099384394147 -0.0087234755066732 0.625387081197158 P28290 SSFA2 P28290.S739.p_SSFA2 P28290_S737sS739s_2_2_737_739 P28290 P28290|P28290-3|E9PHV5|P28290-2|E7EUL7 Sperm-specific antigen 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27817.27817.3 11.13 11.13 2.365 5 2 2 0 596.634 1627.958 S737s S739s TMT10 737 (R) sQsLPTTLLSPVR (V) S(0.99)QS(0.99)LPT(0.0)T(0.0)LLS(0.0)PVR s:Phosphorylated S SSFA2 139638.7 10 37 73.1 652.35 HUMAN 1 -0.029 2.5407 YPLTPPPSPTVDEPK-p Q5THJ4;S1765-p YPLTPPPSPTVDEPK 0.324349872382228 0.390742774671189 -0.137666666666667 -0.085 9.15871590520598 5.42592429005937 -0.137666666666667 -0.085 0.121374767074458 0.286686716777771 -1.83584093897613 -1.18131364521439 Q5THJ4 VPS13D Q5THJ4.S1765.p_VPS13D Q5THJ4_T1761tS1765s_2_2_1761_1765 Q5THJ4 Q5THJ4|Q5THJ4-2 Vacuolar protein sorting-associated protein 13D HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19508.19508.3 20.38 14.73 1.185 4 2 2 0 1067.198 3039.6493 T1761t S1765s TMT10 1752 (K) EVQDKDYPLtPPPsPTVDEPK (I) EVQDKDY(0.0)PLT(0.99)PPPS(0.99)PT(0.0)VDEPK K:TMT10,t:Phosphorylated T,s:Phosphorylated S VPS13D 495672.3 3 29 124.1 545.31 HUMAN 1 -9.1587 -5.4259 YPMEKPASPSSYKQD-p Q92585;S451-p YPMEKPASPSSYKQD 0.1560557092084 0.0267367646491822 -0.316666666666667 0.367333333333333 16.1958499997728 21.3513702202438 -0.316666666666667 0.367333333333333 0.0240112627422625 0.00732593359899352 -3.10588640676009 4.17091542573541 Q92585 MAML1 Q92585.S451.p_MAML1 Q92585_S451s _1_1_451_451 Q92585 Q92585 Mastermind-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17175.17175.3 7.13 7.13 7.134 6 1 1 0 808.7519 2344.2752 S451s TMT10 449 (K) PAsPSSYKQDFTNSK (L) PAS(0.99)PS(0.0)S(0.0)Y(0.0)KQDFT(0.0)NS(0.0)K K:TMT10,s:Phosphorylated S MAML1 108508.8 1 9 1563.1 131.35 HUMAN 1 -16.1958 21.3514 YPNRYRCSPERLKKA-p A1L390;S423-p YPNRYRCSPERLKKA 0.337362550356468 0.0296546491360958 -0.143 -0.47 8.79164549090219 20.6797234610979 -0.143 -0.47 0.132079510558165 0.00855121161363386 -1.77229643574586 -4.02244045672771 A1L390 PLEKHG3 A1L390.S423.p_PLEKHG3 A1L390_S423s _1_1_423_423 A1L390 A1L390|A1L390-3 Pleckstrin homology domain-containing family G member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.7343.7343.3 7.45 7.45 99 1 1 1 0 476.5882 1347.7819 S423s TMT10 422 (R) CsPERLK (K) CS(1.0)PERLK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PLEKHG3 135322.7 2 2 284.1 386.18 HUMAN 1 -8.7916 -20.6797 YPPEDKKTQ______-p A6NG10;T238-p YPPEDKKTQ______ 0.640506722316212 0.907398918736551 -0.105 0.0176666666666667 3.61492849644587 0.590811206989223 -0.105 0.0176666666666667 0.4350179228381 0.872808323640514 -0.842767904264246 0.167818188612131 A6NG10 WBP2 A6NG10.T238.p_WBP2 A6NG10_T238t _1_1_238_238 A6NG10 K7EMC9|A6NG10|Q969T9-2 WW domain-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20355.20355.5 23.24 23.24 4.9 9 1 1 0 1006.093 4946.4703 T238t TMT10 201 (K) AAEAAASAYYNPGNPHNVYMPTSQPPPPPYYPPEDKKtQ (-) AAEAAAS(0.0)AY(0.0)Y(0.0)NPGNPHNVY(0.0)MPT(0.0)S(0.0)QPPPPPY(0.0)Y(0.0)PPEDKKT(0.99)Q K:TMT10,t:Phosphorylated T WBP2 25921.1 1 2 4312.1 33.83 HUMAN 1 -3.6149 0.5908 YPPNAPFYKIMVPTV-p Q9P225-2;Y2386-p YPPNAPFYKIMVPTV 0.836372411785846 0.0116327352591839 0.093 0.636666666666667 1.49894120574555 27.0520456386594 0.093 0.636666666666667 0.708118400049022 0.00197149389307018 0.394739616293832 5.57527098065669 Q9P225 DNAH2 Q9P225.2.Y2386.p_DNAH2 Q9P225-2_S2376sY2386y_2_2_2376_2386 Q9P225-2 Q9P225-2 Isoform 2 of Dynein heavy chain 2, axonemal HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.31083.31083.3 10.21 5.39 2.355 3 2 2 0 715.6781 1984.0845 S2376s N2382n Y2386y TMT10 2376 (K) sWRYPPnAPFyK (I) S(0.99)WRY(0.0)PPN(1.0)APFY(0.99)K K:TMT10,s:Phosphorylated S,n:Deamidated,y:Phosphorylated Y DNAH2 485128 1 4 4981.1 24.26 HUMAN 1 1.4989 27.052 YPQQYQPSPLPVHYE-p Q8NDT2;S504-p YPQQYQPSPLPVHYE 0.139286671509888 0.687193374128327 0.254333333333333 -0.043 17.5244531548487 2.23032778956573 0.254333333333333 -0.043 0.0176829485988932 0.598366430849681 3.36665504681598 -0.559158708257304 Q8NDT2 RBM15B Q8NDT2.S504.p_RBM15B Q8NDT2_S504s _1_1_504_504 Q8NDT2 Q8NDT2|Q8NDT2-2 Putative RNA-binding protein 15B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.21764.21764.4 20.35 20.35 5.922 8 1 1 0 915.9444 3580.791 S504s TMT10 492 (K) AEETRYPQQYQPsPLPVHYELLTDGYTR (H) AEET(0.0)RY(0.0)PQQY(0.0)QPS(0.99)PLPVHY(0.0)ELLT(0.0)DGY(0.0)T(0.0)R s:Phosphorylated S RBM15B 97489 3 9 199.1 454.11 HUMAN 1 17.5245 -2.2303 YPRDYQYSDQGIDY_-p Q15417;S323-p YPRDYQYSDQGIDY_ 0.245219643543951 0.0108788508013424 0.201666666666667 0.414666666666667 11.6723906737133 27.5132242838448 0.201666666666667 0.414666666666667 0.068039471669069 0.00177287277811249 2.27435698812698 5.70171025816725 Q15417 CNN3 Q15417.S323.p_CNN3 Q15417_S323s _1_1_323_323 Q15417 Q15417|Q15417-2|Q15417-3 Calponin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.18411.18411.2 8.37 8.37 1.871 4 1 1 0 838.3408 1595.7063 S323s TMT10 319 (R) DYQYsDQGIDY (-) DY(0.0)QY(0.0)S(0.99)DQGIDY(0.0) s:Phosphorylated S CNN3 36584.2 1 13 1713.1 119.85 HUMAN 1 11.6724 27.5132 YPRLGPPTPGEPEAP-p Q96PM9;T248-p YPRLGPPTPGEPEAP 0.666595970118167 0.567117469582556 0.0726666666666667 0.0823333333333334 3.29345887666436 3.32231419763878 0.0726666666666667 0.0823333333333334 0.468440151038466 0.465338065683565 0.779412092100694 0.785033825037074 Q96PM9 ZNF385A Q96PM9.T248.p_ZNF385A Q96PM9_T248t _1_1_248_248 Q96PM9 Q96PM9|Q96PM9-1|Q96PM9-3 Zinc finger protein 385A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.13857.13857.2 10.28 10.28 99 1 1 1 0 970.9709 1860.9653 T248t TMT10 244 (R) LGPPtPGEPEAPAQDR (T) LGPPT(1.0)PGEPEAPAQDR t:Phosphorylated T ZNF385A 40795.3 1 3 2280.1 89.83 HUMAN 1 3.2935 3.3223 YPRRRRSSPSARPPD-p Q96JP5;S83-p YPRRRRSSPSARPPD 0.939386557591381 0.0185549573175166 -0.0123333333333333 0.346666666666667 0.529732490689567 23.8286794078633 -0.0123333333333333 0.346666666666667 0.885170131352231 0.00414125581979447 -0.151365982117258 4.74753737992657 Q96JP5 ZFP91 Q96JP5.S83.p_ZFP91 Q96JP5_S83s _1_1_83_83 Q96JP5 Q96JP5|Q96JP5-2 E3 ubiquitin-protein ligase ZFP91 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6290.6290.3 8.97 8.97 1.142 3 1 1 0 795.0772 2303.2418 S83s Hydrogen 81 (R) RSsPSARPPDVPGQQPQAAK (S) RS(0.0)S(0.99)PS(0.0)ARPPDVPGQQPQAAK K:TMT10-Lys-Only,s:Phosphorylated S ZFP91 64299.7 19 1 1081.1 179.92 HUMAN 1 -0.5297 23.8287 YPSHTKASPVDSWKN-p Q99550;S516-p YPSHTKASPVDSWKN 0.660414873314641 0.0247321482775332 0.086 0.462 3.37367891585154 21.8622918940268 0.086 0.462 0.459866854553856 0.00651284602167478 0.795340427927452 4.28601403599494 Q99550 MPHOSPH9 Q99550.S516.p_MPHOSPH9 Q99550_S516sS520s_2_2_516_520 Q99550 Q99550|Q99550-2|A0A0A0MTP3 M-phase phosphoprotein 9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.15223.15223.4 8.3 6.53 1.313 7 2 2 0 889.431 3394.7747 S516s S520s TMT10 509 (K) YPSHTKAsPVDsWKNQTFQNESR (T) Y(0.0)PS(0.0)HT(0.0)KAS(0.99)PVDS(0.99)WKNQT(0.0)FQNES(0.0)R K:TMT10,s:Phosphorylated S MPHOSPH9 133763.4 2 10 1356.1 150.46 HUMAN 1 3.3737 21.8623 YPSPGAHSPRAGSIS-p Q63HR2-4;S835-p YPSPGAHSPRAGSIS 0.573894540662309 0.952285258377512 0.15 0.00700000000000004 4.43855115502437 0.301621775172001 0.15 0.00700000000000003 0.359869370751426 0.932905863007475 1.00008439465102 0.0881709118108073 Q63HR2 TNS2 Q63HR2.4.S835.p_TNS2 Q63HR2-4_S835s _1_1_835_835 Q63HR2-4 Q63HR2-4 Isoform 4 of Tensin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.4596.4596.3 13.54 13.54 2.652 3 1 1 0 478.8956 1354.7065 S835s TMT10 827 (R) GYPSPGAHsPR (A) GY(0.0)PS(0.0)PGAHS(0.99)PR s:Phosphorylated S TNS2 155500.6 1 6 453.1 308.04 HUMAN 1 4.4386 0.3016 YPSSISSSPQKDLTQ-p Q14157-5;S609-p YPSSISSSPQKDLTQ 0.816530890745719 0.260191902497591 -0.033 -0.126666666666667 1.69048583925422 7.70317497788896 -0.033 -0.126666666666667 0.677565705028758 0.169700257852689 -0.439111984947044 -1.58314081913506 Q14157 UBAP2L Q14157.5.S609.p_UBAP2L Q14157-5_S609s _1_1_609_609 Q14157-5 Q14157|F8W726|Q14157-3|Q14157-1|Q14157-4|Q14157-5 Isoform 5 of Ubiquitin-associated protein 2-like HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.9061.9267.3 13.5 8.9 1.481 6 1 1 0 625.6647 1795.0114 S609s TMT10 601 (R) RYPSSISSsPQK (D) RY(0.0)PS(0.0)S(0.0)IS(0.0)S(0.0)S(0.99)PQK K:TMT10,s:Phosphorylated S UBAP2L 116866.1 35 18 189.1 467.5 HUMAN 1 -1.6905 -7.7032 YPTQGRRSPQEGGSH-p Q8TC76;S173-p YPTQGRRSPQEGGSH 0.88602112979402 0.0213715225147708 0.0276666666666667 0.336 1.03135051705761 22.8367013674735 0.0276666666666667 0.336 0.788614845468296 0.00520391103391419 0.281723991996982 4.51092366565338 Q8TC76 FAM110B Q8TC76.S173.p_FAM110B Q8TC76_S173s _1_1_173_173 Q8TC76 Q8TC76 Protein FAM110B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.3940.3940.3 13.28 13.28 13.277 2 1 1 0 473.8909 1339.6916 S173s TMT10 173 (R) sPQEGGSHVGR (R) S(0.99)PQEGGS(0.0)HVGR s:Phosphorylated S FAM110B 41012.4 4 2 1986.1 104.03 HUMAN 1 1.0314 22.8367 YPTRGVGYETILKEQ-p A0A0C4DFY5;Y369-p YPTRGVGYETILKEQ 0.338038342621858 0.630308437349205 0.236666666666667 0.0473333333333334 8.76807088625665 2.72473754747186 0.236666666666667 0.0473333333333334 0.132798421049104 0.533981542133191 1.76821568265038 0.663838138145896 A0A0C4DFY5 GPRC5C A0A0C4DFY5.Y369.p_GPRC5C A0A0C4DFY5_Y369y _1_1_369_369 A0A0C4DFY5 A0A0C4DFY5|Q9NQ84-2|J9JIE0 G-protein-coupled receptor family C group 5 member C GG20160819_MSz_CCLE_T4D7_pY_Injection_02.21740.21740.2 16.5 6.73 2.039 2 1 1 0 759.4238 1437.8717 Y369y TMT10 366 (R) GVGyETILK (E) GVGY(0.99)ET(0.0)ILK K:TMT10,y:Phosphorylated Y GPRC5C 53504 2 1 216.1 16.5 HUMAN 1 8.7681 2.7247 YQDQKPGTSGLRKRV-p P36871;T19-p YQDQKPGTSGLRKRV 0.0775649771385732 0.37466895076327 0.458333333333333 -0.103 23.7449566534916 5.6594013089045 0.458333333333333 -0.103 0.00422186492832286 0.271681376590753 4.73277569792039 -1.22336659803067 P36871 PGM1 P36871.T19.p_PGM1 P36871_T19t _1_1_19_19 P36871 P36871 Phosphoglucomutase-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.8564.8564.3 9.97 9.97 1.25 4 1 1 0 730.0429 2108.15 T19t TMT10 9 (K) TQAYQDQKPGtSGLR (K) T(0.0)QAY(0.0)QDQKPGT(0.99)S(0.0)GLR K:TMT10,t:Phosphorylated T PGM1 61733.3 1 1 2909.1 66.18 HUMAN 1 23.745 -5.6594 YQEAEHGSFRVTSSS-p Q92622;S562-p YQEAEHGSFRVTSSS 0.831985797231838 0.0233375378346971 0.0416666666666667 -0.315333333333333 1.540131262285 22.2699499410109 0.0416666666666666 -0.315333333333333 0.701434097774396 0.00592932158978009 0.404367932352938 -4.37923012739643 Q92622 KIAA0226 Q92622.S562.p_KIAA0226 Q92622_S562s _1_1_562_562 Q92622 Q92622|Q92622-2|Q92622-3 Run domain Beclin-1-interacting and cysteine-rich domain-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.20503.20503.3 15.64 15.64 1.815 2 1 1 0 700.9974 2021.0112 S562s TMT10 550 (K) NLLPMYQEAEHGsFR (V) NLLPMY(0.0)QEAEHGS(0.99)FR s:Phosphorylated S RUBCN 110331.4 1 9 919.1 200.35 HUMAN 1 1.5401 -22.2699 YQEKVHMTWTKDKYM-p Q9UHW9;T1048-p YQEKVHMTWTKDKYM 0.953847342378743 0.996467402138272 -0.0126666666666667 0.000666666666666686 0.401500461247224 0.0215184713837221 -0.0126666666666667 0.000666666666666723 0.911695799535607 0.99505744368504 -0.116185383909196 0.00648530190687559 Q9UHW9 SLC12A6 Q9UHW9.T1048.p_SLC12A6 Q9UHW9_T1048t_1_1_1048_1048 Q9UHW9 Q9UHW9|Q9UHW9-4|Q9UHW9-3|Q9UHW9-2|Q9UHW9-5|Q9UHW9-6|B3KXX3 Solute carrier family 12 member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.9699.9699.3 7.51 7.51 7.513 2 1 1 0 486.2521 1360.7811 M1047m T1048t TMT10 1045 (K) VHmtWTK (D) VHM(1.0)T(0.99)WT(0.0)K K:TMT10,m:Oxidized methionine,t:Phosphorylated T SLC12A6 128698.7 2 14 1247.3 162.14 HUMAN 1 -0.4015 0.0215 YQEYDSDSDVPEELK-p Q96JG6;S561-p YQEYDSDSDVPEELK 0.272925101260209 0.0153374743357658 -0.276 0.374 10.6823938756559 25.095127898221 -0.276 0.374 0.0854595521231435 0.00309376420382562 -2.10055599102547 5.06156134369185 Q96JG6 VPS50 Q96JG6.S561.p_VPS50 Q96JG6_S559sS561s_2_2_559_561 Q96JG6 Q96JG6|Q96JG6-3 Syndetin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17382.17382.3 16.76 14.73 1.175 5 2 2 0 917.0753 2589.2721 S559s S561s TMT10 552 (K) SAYQEYDsDsDVPEELKR (D) S(0.0)AY(0.0)QEY(0.0)DS(0.99)DS(0.99)DVPEELKR K:TMT10,s:Phosphorylated S VPS50 112027.8 5 10 1224.1 164.69 HUMAN 1 -10.6824 25.0951 YQFPDCDSDEDEDFK-p O43236-4;S340-p YQFPDCDSDEDEDFK 0.273029997016508 0.0107297167154974 0.163333333333333 0.454333333333333 10.67784574782 27.6117737166312 0.163333333333333 0.454333333333334 0.0855490961024595 0.00173309603364047 2.09976169490036 5.72900679989752 O43236 SEPT4 O43236.4.S340.p_SEPT4 O43236-4_S340s _1_1_340_340 O43236-4 O43236-4|O43236-3|O43236-2|J3KSZ7|J3QRT6|O43236-5 Isoform 4 of Septin-4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.25816.25816.4 23.28 21.8 8.388 2 1 1 0 897.4279 3506.724 S340s TMT10 332 (K) IYQFPDCDsDEDEDFKLQDQALK (E) IY(0.0)QFPDCDS(0.99)DEDEDFKLQDQALK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S SEPT4 57068.4 3 1 5075.1 23.28 HUMAN 1 10.6778 27.6118 YQFPECDSDEDEDFK-p G3XAH0;S234-p YQFPECDSDEDEDFK 0.199306780118349 0.00454811754958764 -0.278333333333333 0.665666666666667 13.6341551593023 34.3532620750213 -0.278333333333333 0.665666666666667 0.0433096310531169 0.000367006530802382 -2.62599078090931 7.85913599412478 G3XAH0 NotFound G3XAH0.S234.p_NotFound G3XAH0_S234s _1_1_234_234 G3XAH0 G3XAH0|Q99719|Q99719-2|E7EX32|B4DJ62 HCG2002594, isoform CRA_c HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.24041.24041.5 28.77 28.77 11.758 2 1 1 0 931.8445 4575.2341 S234s TMT10 215 (R) IREEIDKFGIHVYQFPECDsDEDEDFKQQDR (E) IREEIDKFGIHVY(0.0)QFPECDS(0.99)DEDEDFKQQDR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S SEPT5 44300.9 8 2 1524.1 134.16 HUMAN 1 -13.6342 34.3533 YQGNAKASPPLQDSA-p O14867;S196-p YQGNAKASPPLQDSA 0.749496094212913 0.0844418740802357 0.0483333333333333 -0.236333333333333 2.38332661471101 14.2107589739437 0.0483333333333333 -0.236333333333333 0.577653406167259 0.0379248701599693 0.592113208523428 -2.73002924032258 O14867 BACH1 O14867.S196.p_BACH1 O14867_S196s _1_1_196_196 O14867 O14867 Transcription regulator protein BACH1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.21400.21400.3 20.86 19.14 6.221 6 1 1 0 927.4374 2700.3261 S196s TMT10 195 (K) AsPPLQDSASQTYESMCLEK (D) AS(0.99)PPLQDS(0.0)AS(0.0)QT(0.0)Y(0.0)ES(0.0)MCLEK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S BACH1 83896.1 5 1 2229.1 92.57 HUMAN 1 2.3833 -14.2108 YQHERRASDWAVDSN-p Q99758;S866-p YQHERRASDWAVDSN 0.19519838261091 0.00716926770730732 0.200333333333333 0.493666666666667 13.8384713064562 30.6889486662685 0.200333333333333 0.493666666666667 0.0413192918111646 0.000853306656244493 2.66330919132912 6.63367333610425 Q99758 ABCA3 Q99758.S866.p_ABCA3 Q99758_S866s_1_1_866_866 Q99758 Q99758|H0Y3H2 ATP-binding cassette sub-family A member 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.26473.26473.3 26.28 26.28 7.316 3 1 1 0 1153.8484 3363.5783 S866s M878m TMT10 864 (R) RAsDWAVDSNLCGAmDPSDGIGALIEEER (T) RAS(0.99)DWAVDS(0.0)NLCGAM(1.0)DPS(0.0)DGIGALIEEER C:Carbamidomethylation,s:Phosphorylated S,m:Oxidized methionine ABCA3 192956.2 11 9 1112.1 175.87 HUMAN 1 13.8385 30.6889 YQHIKVHTGERPYCC-p Q9H116;T542-p YQHIKVHTGERPYCC 0.53064422995519 0.155477076231445 0.0983333333333333 -0.275666666666667 5.09269433359137 10.6303434729683 0.0983333333333333 -0.275666666666667 0.30954982771895 0.086489951326675 1.12101801315424 -2.09056155214435 Q9H116 GZF1 Q9H116.T542.p_GZF1 Q9H116_T542t _1_1_542_542 Q9H116 Q9H116|Q9H116-4 GDNF-inducible zinc finger protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5392.5392.4 8.34 8.34 8.342 2 1 1 0 602.0216 2325.0939 T542t TMT10 540 (K) VHtGERPYCCDQCGK (Q) VHT(0.99)GERPY(0.0)CCDQCGK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T GZF1 82145 1 3 1980.1 104.43 HUMAN 1 5.0927 -10.6303 YQIACGISQGLADNT-p P26639;S110-p YQIACGISQGLADNT 0.840962187159648 0.0737653599098837 0.0516666666666667 0.216666666666667 1.45298897891397 15.0288025755984 0.0516666666666666 0.216666666666667 0.715650702796353 0.0314137470538866 0.383940024954905 2.88196983026566 P26639 TARS P26639.S110.p_TARS P26639_S110s _1_1_110_110 P26639 P26639 Threonine--tRNA ligase, cytoplasmic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.28294.28294.3 9.62 9.62 1.686 5 1 1 0 953.8285 2779.5064 S110s TMT10 100 (K) TTPYQIACGIsQGLADNTVIAK (V) T(0.0)T(0.0)PY(0.0)QIACGIS(0.99)QGLADNT(0.0)VIAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S TARS 84346.4 1 3 3880.1 41.42 HUMAN 1 1.453 15.0288 YQILPLHSQIPREEQ-p Q08211;S688-p YQILPLHSQIPREEQ 0.481732860388529 0.0524992933439477 0.103333333333333 0.421666666666667 5.83662893631003 17.0735426814301 0.103333333333333 0.421666666666667 0.260817727366533 0.0196175935301222 1.2554051799434 3.27462498752684 Q08211 DHX9 Q08211.S688.p_DHX9 Q08211_S688s _1_1_688_688 Q08211 Q08211 ATP-dependent RNA helicase A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.20200.20200.3 13.17 13.17 13.169 2 1 1 0 591.9933 1693.9951 S688s TMT10 681 (R) YQILPLHsQIPR (E) Y(0.0)QILPLHS(0.99)QIPR s:Phosphorylated S DHX9 142268.2 3 6 1186.1 168.77 HUMAN 1 5.8366 17.0735 YQISRGNSDGYIIPI-p O95490-6;S1445-p YQISRGNSDGYIIPI 0.62773843923883 0.191914586260089 -0.072 0.206333333333333 3.75819237297708 9.42534705814071 -0.072 0.206333333333333 0.420901780302812 0.114147208241258 -0.870616147918468 1.88130978108813 O95490 ADGRL2 O95490.6.S1445.p_ADGRL2 O95490-6_S1445s _1_1_1445_1445 O95490-6 O95490-6|O95490-7|B1ALU3|O95490-5 Isoform 6 of Adhesion G protein-coupled receptor L2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22254.22254.3 15.84 15.84 5.69 2 1 1 0 610.326 1748.9947 S1445s TMT10 1443 (R) GNsDGYIIPINK (E) GNS(0.99)DGY(0.0)IIPINK K:TMT10,s:Phosphorylated S ADGRL2 167345.9 1 1 5852.1 15.84 HUMAN 1 -3.7582 9.4253 YQKIKQSSPNYHEEK-p O00472;S604-p YQKIKQSSPNYHEEK 0.464637908924093 0.00112568182952083 -0.103666666666667 -1.279 6.14167281424807 49.1676711569585 -0.103666666666667 -1.279 0.243126735382843 1.21124747384724e-05 -1.30976238719956 -15.1366873715667 O00472 ELL2 O00472.S604.p_ELL2 O00472_S604s _1_1_604_604 O00472 O00472|O00472-2 RNA polymerase II elongation factor ELL2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.7270.7270.4 11.69 11.69 1.127 3 1 1 0 557.549 2147.2064 S604s TMT10 600 (K) IKQSsPNYHEEK (Y) IKQS(0.0)S(0.99)PNY(0.0)HEEK K:TMT10,s:Phosphorylated S ELL2 72779.5 1 6 1120.2 175.11 HUMAN 1 -6.1417 -49.1677 YQKLDVKSIDDEDVD-p Q8TEQ0;S344-p YQKLDVKSIDDEDVD 0.989051104038883 0.0368950882235069 0.00299999999999999 0.368333333333333 0.0978889332032762 19.2722002085774 0.00299999999999998 0.368333333333333 0.977712362737034 0.0118244235885483 0.0292517580624634 3.72114684008379 Q8TEQ0 SNX29 Q8TEQ0.S344.p_SNX29 Q8TEQ0_S344s _1_1_344_344 Q8TEQ0 Q8TEQ0|Q8TEQ0-2|Q8IUI4 Sorting nexin-29 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.19112.19112.4 20.93 19.81 12.986 4 1 1 0 831.6261 3243.5177 S344s TMT10 340 (K) LDVKsIDDEDVDENEDDVYGNSSGR (K) LDVKS(0.99)IDDEDVDENEDDVY(0.0)GNS(0.0)S(0.0)GR K:TMT10,s:Phosphorylated S SNX29 91651.5 4 4 764.1 229.17 HUMAN 1 0.0979 19.2722 YQKTNAVSEIKRVGK-p Q9UJU6;S169-p YQKTNAVSEIKRVGK 0.955888401918538 0.183583977555819 -0.0146666666666667 0.156 0.383353524987978 9.68174905910154 -0.0146666666666667 0.156 0.915513278205414 0.107603176990144 -0.111137475172553 1.92571753297214 Q9UJU6 DBNL Q9UJU6.S169.p_DBNL Q9UJU6_S169s _1_1_169_169 Q9UJU6 Q9UJU6-3|Q9UJU6-2 Drebrin-like protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.13074.13074.2 10.48 4.99 10.481 2 1 1 0 700.3848 1319.7935 S169s TMT10 165 (K) TNAVsEIK (R) T(0.0)NAVS(0.99)EIK K:TMT10,s:Phosphorylated S DBNL 48491.7 1 3 1388.1 147.4 HUMAN 1 -0.3834 9.6817 YQPFKPLSIGGIIIL-p A0A087WW66;S907-p YQPFKPLSIGGIIIL 0.217250444611228 0.106923275301007 -0.27 0.238333333333333 12.776026983012 12.8280995003673 -0.27 0.238333333333333 0.052771240304152 0.052142283905997 -2.47078542766092 2.47879845616341 A0A087WW66 NotFound A0A087WW66.S907.p_NotFound A0A087WW66_S907s _1_1_907_907 A0A087WW66 Q99460|A0A087WW66|Q99460-2 26S proteasome non-ATPase regulatory subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35373.35373.3 16.92 16.92 16.915 2 1 1 0 852.1835 2474.5718 S907s TMT10 900 (R) YQPFKPLsIGGIIILK (D) Y(0.0)QPFKPLS(0.99)IGGIIILK K:TMT10,s:Phosphorylated S PSMD1 106876.4 1 8 1299.1 156.53 HUMAN 1 -12.776 12.8281 YQQKPYPSPKTIEDL-p P39880-3;S1281-p YQQKPYPSPKTIEDL 0.610403502724566 0.00372619220137502 0.138666666666667 -0.840666666666667 3.97130102195403 36.0326609938102 0.138666666666667 -0.840666666666667 0.400746647418927 0.000249306671583938 0.911639796989686 -8.4822535565844 P39880 CUX1 P39880.3.S1281.p_CUX1 P39880-3_S1281s _1_1_1281_1281 P39880-3 P39880-3|P39880-2|P39880-5|P39880-4|P39880-6 Isoform 3 of Homeobox protein cut-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.10734.10744.4 11.96 11.96 3.707 3 1 1 0 519.2896 1994.1678 S1281s TMT10 1273 (R) AYQQKPYPsPK (T) AY(0.0)QQKPY(0.0)PS(0.99)PK K:TMT10,s:Phosphorylated S CUX1 166084.5 7 5 1194.1 167.77 HUMAN 1 3.9713 -36.0327 YQQNYQNSESGEKNE-p P67809;S165-p YQQNYQNSESGEKNE 0.458936571702861 0.859140070074866 -0.192666666666667 -0.043 6.23937668578937 0.929093194561628 -0.192666666666667 -0.043 0.237718144330776 0.807403598253386 -1.32709664593957 -0.255971414959105 P67809 YBX1 P67809.S165.p_YBX1 P67809_S165s_1_1_165_165 P67809 P67809 Nuclease-sensitive element-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.5201.5201.3 23.07 23.07 1.308 6 1 1 0 1189.8434 3486.5591 N164n S165s Hydrogen 157 (R) NYQQNYQnsESGEKNEGSESAPEGQAQQR (R) N(0.0)Y(0.0)QQN(0.0)Y(0.0)QN(0.99)S(0.99)ES(0.0)GEKN(0.0)EGS(0.0)ES(0.0)APEGQAQQR K:TMT10-Lys-Only,n:Deamidated,s:Phosphorylated S YBX1 35923.5 16 12 929.2 199.34 HUMAN 1 -6.2394 -0.9291 YQQQQYGSGGRGNRN-p Q99729-4;S243-p YQQQQYGSGGRGNRN 0.456329906764675 0.710179879789927 0.117 -0.0736666666666666 6.28540099785911 2.04443505819034 0.117 -0.0736666666666667 0.235212230445535 0.624534586116258 1.33525027368364 -0.518559466698094 Q99729 HNRNPAB Q99729.4.S243.p_HNRNPAB Q99729-4_S243s _1_1_243_243 Q99729-4 D6RBZ0|Q99729-4|Q99729-3|D6RD18|D6R9P3 Isoform 4 of Heterogeneous nuclear ribonucleoprotein A/B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.5062.5062.3 13.63 13.63 2.306 3 1 1 0 712.6664 2056.0158 S243s TMT10 234 (K) EVYQQQQYGsGGRGNR (N) EVY(0.0)QQQQY(0.0)GS(0.99)GGRGNR s:Phosphorylated S HNRNPAB 30814.7 3 2 1879.1 109.49 HUMAN 1 6.2854 -2.0444 YQRETRHSWDSPAFN-p A0A1W2PR28;S741-p YQRETRHSWDSPAFN 0.199742223032394 0.0914233901802998 -0.265333333333333 -0.184333333333333 13.6057454374398 13.7412070643305 -0.265333333333333 -0.184333333333333 0.0435938731609899 0.0422551155413213 -2.62081336006341 -2.64397476716958 A0A1W2PR28 NotFound A0A1W2PR28.S741.p_NotFound A0A1W2PR28_S741s _1_1_741_741 A0A1W2PR28 Q5JU85|A0A1W2PR28|Q5JU85-3|Q5JU85-2 IQ motif and SEC7 domain-containing protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.11852.11852.3 18.35 13.64 1.988 3 1 1 0 823.0509 2387.169 S741s TMT10 737 (R) ETRHsWDSPAFNNDVVQR (R) ET(0.0)RHS(0.99)WDS(0.0)PAFNNDVVQR s:Phosphorylated S IQSEC2 128893.2 6 7 1275.1 159.32 HUMAN 1 -13.6057 -13.7412 YQRLGLGTLSSSLSR-p O95248-4;T1137-p YQRLGLGTLSSSLSR 0.949355669265611 0.0130936211742034 -0.014 1.07666666666667 0.446276910015224 26.2249937908089 -0.014 1.07666666666667 0.902344361719716 0.00238506720543878 -0.128566042927659 5.35375890298907 O95248 SBF1 O95248.4.T1137.p_SBF1 O95248-4_T1137t _1_1_1137_1137 O95248-4 O95248-4|G5E933 Isoform 4 of Myotubularin-related protein 5 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.25494.25494.3 12.34 12.34 2.665 5 1 1 0 500.6065 1419.8369 T1137t TMT10 1133 (R) LGLGtLSSSLSR (A) LGLGT(0.99)LS(0.0)S(0.0)S(0.0)LS(0.0)R t:Phosphorylated T SBF1 213155.5 3 5 1740.1 118.23 HUMAN 1 -0.4463 26.225 YQRLVRASPAFDYAE-p Q15527;S59-p YQRLVRASPAFDYAE 0.897204271827988 0.0298310132766052 0.0223333333333333 0.277333333333333 0.923604501736202 20.6428908236784 0.0223333333333333 0.277333333333333 0.808424654717179 0.00862404308668913 0.254604091123166 4.01438878642981 Q15527 SURF2 Q15527.S59.p_SURF2 Q15527_S59s _1_1_59_59 Q15527 Q15527 Surfeit locus protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.26245.26245.4 22.36 22.36 7.386 4 1 1 0 753.8979 2932.5973 S59s TMT10 55 (R) LVRAsPAFDYAEFEPHIVPSTK (N) LVRAS(0.99)PAFDY(0.0)AEFEPHIVPS(0.0)T(0.0)K K:TMT10,s:Phosphorylated S SURF2 30103.5 2 1 1281.1 158.83 HUMAN 1 0.9236 20.6429 YQWDPQLTPARPQGL-p Q6ZRV2;T465-p YQWDPQLTPARPQGL 0.507628685002638 0.063125970951219 0.0993333333333333 -0.211666666666667 5.43176278859078 15.9735255424302 0.0993333333333333 -0.211666666666667 0.286301564435992 0.0252724558055153 1.1826254613635 -3.06095013907446 Q6ZRV2 FAM83H Q6ZRV2.T465.p_FAM83H Q6ZRV2_T465t _1_1_465_465 Q6ZRV2 Q6ZRV2 Protein FAM83H HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.26586.26586.4 10.82 10.82 1.335 3 1 1 0 904.7071 3535.8374 T465t TMT10 451 (R) DQLYQQQYQWDPQLtPARPQGLFEK (L) DQLY(0.0)QQQY(0.0)QWDPQLT(0.99)PARPQGLFEK K:TMT10,t:Phosphorylated T FAM83H 127633.5 2 6 7.1 1347.23 HUMAN 1 5.4318 -15.9735 YRAQPSVSLGAAYRA-p Q96PK6;S244-p YRAQPSVSLGAAYRA 0.911605742223265 0.870874134391464 0.0206666666666667 0.0436666666666667 0.786375782758867 0.845822952338129 0.0206666666666667 0.0436666666666667 0.834377187655948 0.823033863993331 0.219399844621972 0.234722017709955 Q96PK6 RBM14 Q96PK6.S244.p_RBM14 Q96PK6_S244s _1_1_244_244 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.14735.14735.3 12.11 12.11 1.603 3 1 1 0 510.2625 1448.8059 S244s TMT10 239 (R) AQPSVsLGAAYR (A) AQPS(0.0)VS(0.99)LGAAY(0.0)R s:Phosphorylated S RBM14 69661.6 1 8 151.1 510.8 HUMAN 1 0.7864 0.8458 YRASALGSDGVRVTM-p O00159-3;S10-p YRASALGSDGVRVTM 0.568417101345875 0.0906115929525564 0.0833333333333333 0.189 4.51467240960769 13.7971827790999 0.0833333333333333 0.189 0.353616693569719 0.0417139889816963 1.0143172859927 2.65419157240771 O00159 MYO1C O00159.3.S10.p_MYO1C O00159-3_S10s _1_1_10_10 O00159-3 O00159-3 Isoform 3 of Unconventional myosin-Ic HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.22228.22228.3 13.04 6.47 2.145 5 1 1 0 767.7236 2221.1808 S10s TMT10 5 (R) ASALGsDGVRVTMESALTAR (D) AS(0.0)ALGS(0.99)DGVRVT(0.0)MES(0.0)ALT(0.0)AR s:Phosphorylated S MYO1C 120424.7 3 3 296.4 379.15 HUMAN 1 4.5147 13.7972 YRCHRKDSLPDADLA-p Q86SQ0;S513-p YRCHRKDSLPDADLA 0.534705148071304 0.0277903709809549 0.0946666666666667 0.339 5.03344862643547 21.0908449011 0.0946666666666667 0.339 0.313801588247817 0.00777885202122031 1.11018423684373 4.11294792361271 Q86SQ0 PHLDB2 Q86SQ0.S513.p_PHLDB2 Q86SQ0_S513s _1_1_513_513 Q86SQ0 Q86SQ0|Q86SQ0-3|Q86SQ0-2|E9PGF6|G5E9V3 Pleckstrin homology-like domain family B member 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.24653.24653.3 25.34 25.34 5.483 8 1 1 0 1094.8642 3202.6091 S513s TMT10 511 (R) KDsLPDADLASCGSLSQSSASFFTPR (S) KDS(0.99)LPDADLAS(0.0)CGS(0.0)LS(0.0)QS(0.0)S(0.0)AS(0.0)FFT(0.0)PR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S PHLDB2 142897.4 2 7 1231.1 163.76 HUMAN 1 5.0334 21.0908 YRCPQDQSPDRVGTE-p Q9H116;S265-p YRCPQDQSPDRVGTE 0.629969878212203 0.227616678992478 -0.0656666666666667 0.122333333333333 3.73247782166887 8.46803857228621 -0.0656666666666667 0.122333333333333 0.423401329931469 0.142297130626535 -0.865634144680405 1.71569434295453 Q9H116 GZF1 Q9H116.S265.p_GZF1 Q9H116_S265s _1_1_265_265 Q9H116 Q9H116 GDNF-inducible zinc finger protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.14655.14655.4 17.71 17.71 4.003 5 1 1 0 948.936 3712.7583 S265s TMT10 250 (K) TAEGDVGDYRCPQDQsPDRVGTEMEQVSK (N) T(0.0)AEGDVGDY(0.0)RCPQDQS(0.99)PDRVGT(0.0)EMEQVS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S GZF1 82145 6 1 1980.1 104.43 HUMAN 1 -3.7325 8.468 YRDANIKSPALAFSL-p Q96PU8;S211-p YRDANIKSPALAFSL 0.198300279868763 0.566285303056175 0.208 0.082 13.6904981040069 3.33101928542288 0.208 0.082 0.0427513850627756 0.464406266678804 2.63626711516243 0.786762591516536 Q96PU8 QKI Q96PU8.S211.p_QKI Q96PU8_S211s _1_1_211_211 Q96PU8 Q96PU8|Q96PU8-6|Q96PU8-8|Q96PU8-9 Protein quaking HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.26117.26117.3 17.11 13.19 2.459 3 1 1 0 908.1618 2642.503 S211s TMT10 206 (R) DANIKsPALAFSLAATAQAAPR (I) DANIKS(0.99)PALAFS(0.0)LAAT(0.0)AQAAPR K:TMT10,s:Phosphorylated S QKI 37784.1 1 1 5690.1 17.11 HUMAN 1 13.6905 3.331 YRDLKEVTPEGLQMV-p P22234-2;T245-p YRDLKEVTPEGLQMV 0.244862108764088 0.138371129389698 -0.468666666666667 0.216333333333333 11.6858116516152 11.3159723628519 -0.468666666666667 0.216333333333333 0.0678295342244952 0.0738588878255405 -2.27672711696449 2.21053059147401 P22234 PAICS P22234.2.T245.p_PAICS P22234-2_T245t _1_1_245_245 P22234-2 P22234-2|D6RF62 Isoform 2 of Multifunctional protein ADE2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.20399.20399.3 11.67 11.67 99 1 1 1 0 590.3159 1688.9657 T245t TMT10 243 (K) EVtPEGLQMVK (K) EVT(1.0)PEGLQMVK K:TMT10,t:Phosphorylated T PAICS 48699 2 5 991.1 191.33 HUMAN 1 -11.6858 11.316 YRDSAYFSDNDSEPE-p Q8IWU2;S1107-p YRDSAYFSDNDSEPE 0.487849745814759 0.272983274205636 -0.0976666666666667 -0.117 5.74404520201295 7.42793015999323 -0.0976666666666667 -0.117 0.266437579636265 0.180803562735973 -1.23883002103658 -1.53528105254795 Q8IWU2 LMTK2 Q8IWU2.S1107.p_LMTK2 Q8IWU2_S1107s _1_1_1107_1107 Q8IWU2 Q8IWU2 Serine/threonine-protein kinase LMTK2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8498.8498.3 14.29 14.29 1.954 4 1 1 0 690.2957 1988.9035 S1107s Hydrogen 1102 (R) DSAYFsDNDSEPEKR (S) DS(0.0)AY(0.0)FS(0.99)DNDS(0.0)EPEKR K:TMT10-Lys-Only,s:Phosphorylated S LMTK2 166095.5 4 5 1473.1 139.46 HUMAN 1 -5.744 -7.4279 YRFAEPDSEENIIFE-p Q07889;S582-p YRFAEPDSEENIIFE 0.835822299105224 0.842016903820397 0.0303333333333333 0.0243333333333334 1.50517221354718 1.04963383161473 0.0303333333333333 0.0243333333333333 0.70710316091496 0.78530184327676 0.396199268765958 0.286254240829171 Q07889 SOS1 Q07889.S582.p_SOS1 Q07889_S582s_1_1_582_582 Q07889 Q07889|G5E9C8 Son of sevenless homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.27951.27951.3 15.97 12.09 3.1 1 1 1 0 936.1072 2725.3431 S582s N591n TMT10 577 (R) FAEPDsEENIIFEEnMQPK (A) FAEPDS(1.0)EEN(0.0)IIFEEN(0.99)MQPK K:TMT10,s:Phosphorylated S,n:Deamidated SOS1 153431.2 1 1 2313.1 88.35 HUMAN 1 1.5052 1.0496 YRHKYENYRMIKKSG-p Q9H582;Y747-p YRHKYENYRMIKKSG 0.876965772598429 0.203896927713725 0.061 0.170666666666667 1.12004363113748 9.08671011348424 0.061 0.170666666666667 0.772672822445038 0.123403929407828 0.303724846247604 1.8227114103321 Q9H582 ZNF644 Q9H582.Y747.p_ZNF644 Q9H582_Y747y_1_1_747_747 Q9H582 Q9H582|Q9H582-2|A0A087WZL9 Zinc finger protein 644 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.15161.15161.3 8.05 1.17 6.519 2 1 1 0 516.9218 1467.8109 N746n Y747y TMT10 742 (R) HKYEnyR (M) HKY(0.0)EN(1.0)Y(0.99)R K:TMT10,n:Deamidated,y:Phosphorylated Y ZNF644 151445.4 1 5 1099.1 177.93 HUMAN 1 1.12 9.0867 YRIQEQESSGEEDSD-p P41236;S121-p YRIQEQESSGEEDSD 0.885820345057877 0.0257079144253812 0.0268333333333333 0.347833333333333 1.03544952265151 21.6254629338572 0.0268333333333333 0.347833333333333 0.787870877540211 0.00687786594160716 0.282747080638713 4.23242597994589 P41236 PPP1R2 P41236.S121.p_PPP1R2 P41236_S121sS122s_2_2_121_122 P41236 P41236|Q6NXS1|G1AUC5 Protein phosphatase inhibitor 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.12340.12340.4 18.6 19.61 9.722 4 2 2 0 849.8994 3236.6373 S121s S122s TMT10 116 (R) IQEQEssGEEDSDLSPEEREKK (R) IQEQES(0.99)S(0.99)GEEDS(0.0)DLS(0.0)PEEREKK K:TMT10,s:Phosphorylated S PPP1R2 23071.9 49 7 717.1 237.75 HUMAN 2 1.0354 21.6255 YRKQDPDTWENELPV-p Q92995;T181-p YRKQDPDTWENELPV 0.169413801333057 0.020025890583684 -0.327333333333333 -0.546666666666667 15.3810498672963 23.2871260979301 -0.327333333333333 -0.546666666666667 0.0289664326596843 0.00469123717572754 -2.9502276160591 -4.6173786112974 Q92995 USP13 Q92995.T181.p_USP13 Q92995_T181t _1_1_181_181 Q92995 Q92995|Q92995-2 Ubiquitin carboxyl-terminal hydrolase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.18422.18422.3 17.09 11.39 6.554 2 1 1 0 775.3917 2244.1912 T181t Hydrogen 176 (R) KQDPDtWENELPVSK (Y) KQDPDT(0.99)WENELPVS(0.0)K K:TMT10-Lys-Only,t:Phosphorylated T USP13 98067.1 5 4 1969.1 104.91 HUMAN 1 -15.381 -23.2871 YRKRGIHSAIDASQT-p P54819;S208-p YRKRGIHSAIDASQT 0.549643772444223 0.0545139506808509 0.205 -0.240333333333333 4.7976012275504 16.8437608568983 0.205 -0.240333333333333 0.331314068226823 0.0206834944590835 1.06683351728622 -3.22949255592921 P54819 AK2 P54819.S208.p_AK2 P54819_S208s _1_1_208_208 P54819 P54819|P54819-2|F8W1A4|P54819-5|P54819-6 Adenylate kinase 2, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.37777.37777.4 22.29 22.29 2.525 5 1 1 0 771.666 3003.6555 S208s TMT10 205 (R) GIHsAIDASQTPDVVFASILAAFSK (A) GIHS(0.99)AIDAS(0.0)QT(0.0)PDVVFAS(0.0)ILAAFS(0.0)K K:TMT10,s:Phosphorylated S AK2 26705.5 1 3 3699.1 45.01 HUMAN 1 4.7976 -16.8438 YRLAQDPYRLGHDPY-p P18583-9;Y968-p YRLAQDPYRLGHDPY 0.390119915720939 0.681370807300857 -0.217 -0.118 7.5580627676034 2.2789215868191 -0.217 -0.118 0.17546630197352 0.59170854533884 -1.55838805372487 -0.569652361108929 P18583 SON P18583.9.Y968.p_SON P18583-9_Y968y _1_1_968_968 P18583-9 P18583-9|P18583-5|P18583-7 Isoform I of Protein SON GG20160819_MSz_CCLE_T4D7_pY_Injection_02.11847.11884.3 15.73 10.63 7.201 2 1 1 0 670.6642 1930.0133 Y968y TMT10 963 (R) LAQDPyRLGHDPYR (L) LAQDPY(0.99)RLGHDPY(0.0)R y:Phosphorylated Y SON 268487.7 2 1 13.1 89.57 HUMAN 1 -7.5581 -2.2789 YRLGHDPYRLGHDAY-p P18583-9;Y975-p YRLGHDPYRLGHDAY 0.170471902039206 0.577600589003011 -0.227666666666667 -0.254 15.3329222563071 3.21544575828587 -0.227666666666667 -0.254 0.0292892178561868 0.47693085959595 -2.94112737797046 -0.763730438616754 P18583 SON P18583.9.Y975.p_SON P18583-9_Y975y _1_1_975_975 P18583-9 P18583-9|P18583-5|P18583-7|P18583-4 Isoform I of Protein SON GG20160819_MSz_CCLE_T4D7_pY_Injection_02.8548.8548.4 19.54 15.58 6.924 2 1 1 0 495.4939 1898.9823 Y975y TMT10 970 (R) LGHDPyRLGHDAYR (L) LGHDPY(0.99)RLGHDAY(0.0)R y:Phosphorylated Y SON 268487.7 3 2 13.1 89.57 HUMAN 1 -15.3329 -3.2154 YRLGQDPYRLGHDPY-p P18583-9;Y989-p YRLGQDPYRLGHDPY 0.405687089550458 0.246578258392095 -0.147333333333333 -0.136666666666667 7.23458265082451 8.01250985595854 -0.147333333333333 -0.136666666666667 0.189034788148553 0.158033447522315 -1.5020164132902 -1.63681101570877 P18583 SON P18583.9.Y989.p_SON P18583-9_Y989y _1_1_989_989 P18583-9 P18583-9|P18583-5 Isoform I of Protein SON GG20160819_MSz_CCLE_T4D7_pY_Injection_02.17568.17568.4 18.87 13.14 5.235 4 1 1 0 710.3528 2758.4263 Y989y TMT10 984 (R) LGQDPyRLGHDPYRLTPDPYR (M) LGQDPY(0.99)RLGHDPY(0.0)RLT(0.0)PDPY(0.0)R y:Phosphorylated Y SON 268487.7 5 3 13.1 89.57 HUMAN 1 -7.2346 -8.0125 YRQMRPKTFPASNYT-p O95835;T17-p YRQMRPKTFPASNYT 0.431100679927903 0.0644883420662438 -0.127666666666667 -0.313 6.72712808787247 15.8494334283347 -0.127666666666667 -0.313 0.212464899012404 0.0260049879677128 -1.41315869626945 -3.0372119103419 O95835 LATS1 O95835.T17.p_LATS1 O95835_T17t _1_1_17_17 O95835 O95835|O95835-2 Serine/threonine-protein kinase LATS1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.12005.12005.4 12.93 12.93 2.347 6 1 1 0 627.8264 2428.3171 T17t TMT10 12 (R) QMRPKtFPASNYTVSSR (Q) Q(0.0)M(0.0)RPKT(0.99)FPAS(0.0)N(0.0)Y(0.0)T(0.0)VS(0.0)S(0.0)R K:TMT10,t:Phosphorylated T LATS1 127380.9 3 1 824.1 217.64 HUMAN 1 -6.7271 -15.8494 YRRFLKLSPESAEEY-p Q9HCS7;S176-p YRRFLKLSPESAEEY 0.418569333514126 0.0268584189891589 0.115 0.306666666666667 6.98022655526588 21.3235827310478 0.115 0.306666666666667 0.20043674642479 0.00737295743875064 1.45755153001769 4.16470965397611 Q9HCS7 XAB2 Q9HCS7.S176.p_XAB2 Q9HCS7_S176s _1_1_176_176 Q9HCS7 Q9HCS7 Pre-mRNA-splicing factor SYF1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.35404.35404.4 14.48 14.48 1.149 4 1 1 0 707.3835 2746.5522 S176s TMT10 172 (R) FLKLsPESAEEYIEYLK (S) FLKLS(0.99)PES(0.0)AEEY(0.0)IEY(0.0)LK K:TMT10,s:Phosphorylated S XAB2 100806.6 2 1 4761.1 26.96 HUMAN 1 6.9802 21.3236 YRRLTGDSGIELCPC-p A8MX15;S246-p YRRLTGDSGIELCPC 0.91792561997963 0.802568518434282 -0.0196666666666667 -0.027 0.726479089791599 1.33712468702845 -0.0196666666666667 -0.027 0.845964407095075 0.735000325301295 -0.203787433493591 -0.356391472123864 A8MX15 NotFound A8MX15.S246.p_NotFound A8MX15_S246s _1_1_246_246 A8MX15 A8MX15|Q96G27|B8ZZ95 HCG2039828, isoform CRA_g HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.18176.18176.3 15.01 15.01 1.145 3 1 1 0 989.8184 2887.4694 S246s TMT10 241 (R) RLTGDsGIELCPCPASGEGEPVK (E) RLT(0.0)GDS(0.99)GIELCPCPAS(0.0)GEGEPVK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S WBP1 33794.2 3 2 3640.1 46.28 HUMAN 1 -0.7265 -1.3371 YRRNKSYSFIARMKA-p J3QK89;S915-p YRRNKSYSFIARMKA 0.73500348566583 0.0132589498636546 -0.047 -0.436 2.53213851547072 26.1226725000993 -0.047 -0.436 0.558195265349828 0.00244192741141815 -0.623669896812818 -5.32681006920452 J3QK89 NotFound J3QK89.S915.p_NotFound J3QK89_S915s _1_1_915_915 J3QK89 J3QK89|Q8IWX8 Calcium homeostasis endoplasmic reticulum protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16093.16093.2 10.13 4.64 2.194 3 1 1 0 576.7865 1072.5989 S915s TMT10 913 (K) SYsFIAR (M) S(0.0)Y(0.0)S(0.99)FIAR s:Phosphorylated S CHERP 105388.1 2 6 2291.1 89.54 HUMAN 1 -2.5321 -26.1227 YRRRRSLSPLGGRDD-p Q14004-2;S317-p YRRRRSLSPLGGRDD 0.233628206047255 0.206239833834715 0.238333333333333 0.2105 12.1227300995625 9.02082334666665 0.238333333333333 0.2105 0.0613376298026675 0.125290362372775 2.35412255332329 1.81131440717983 Q14004 CDK13 Q14004.2.S317.p_CDK13 Q14004-2_S315sS317s_2_2_315_317 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.8978.8978.3 13.56 13.56 13.562 4 2 2 0 613.9303 1679.846 S315s S317s Hydrogen 315 (R) sLsPLGGRDDSPVSHR (A) S(0.99)LS(0.99)PLGGRDDS(0.0)PVS(0.0)HR s:Phosphorylated S CDK13 159173.6 3 18 145.1 520.12 HUMAN 2 12.1227 9.0208 YRRTEDDSLVVWKEV-p Q8TD19;S76-p YRRTEDDSLVVWKEV 0.202050344662992 0.0541453769156041 -0.312666666666667 0.264333333333333 13.486583796953 16.8818065112403 -0.312666666666667 0.264333333333333 0.0448065618407197 0.0205030914542878 -2.59912754802876 3.23694657228025 Q8TD19 NEK9 Q8TD19.S76.p_NEK9 Q8TD19_S76s _1_1_76_76 Q8TD19 Q8TD19 Serine/threonine-protein kinase Nek9 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.17579.17579.3 11.64 8.04 4.115 2 1 1 0 629.3329 1806.0162 S76s TMT10 71 (R) RTEDDsLVVWK (E) RT(0.0)EDDS(0.99)LVVWK K:TMT10,s:Phosphorylated S NEK9 108935.2 1 2 224.1 425.83 HUMAN 1 -13.4866 16.8818 YRRVKKMSDDEDDDE-p Q7KZ85;S125-p YRRVKKMSDDEDDDE 0.251728832793614 0.17766929288265 -0.561 0.171 11.4258895061788 9.8705598096065 -0.561 0.171 0.0720130241672985 0.103025331127688 -2.2308971569397 1.95845035283843 Q7KZ85 SUPT6H Q7KZ85.S125.p_SUPT6H Q7KZ85_S125s _1_1_125_125 Q7KZ85 Q7KZ85|Q7KZ85-3 Transcription elongation factor SPT6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.9512.9512.5 22.92 22.92 14.593 2 1 1 0 782.7849 3829.9299 S125s TMT10 121 (R) VKKMsDDEDDDEEEYGKEEHEK (E) VKKMS(0.99)DDEDDDEEEY(0.0)GKEEHEK K:TMT10,s:Phosphorylated S SUPT6H 200324.3 6 3 279.1 388.92 HUMAN 1 -11.4259 9.8706 YRSALTQSQSAKQQK-p Q7Z589-4;S947-p YRSALTQSQSAKQQK 0.473164039368474 0.363033799858537 -0.163 -0.122333333333333 5.98703953233565 5.83470512532244 -0.163 -0.122333333333333 0.251939374490637 0.260933288392785 -1.28225442660701 -1.25477030590278 Q7Z589 C11orf30 Q7Z589.4.S947.p_C11orf30 Q7Z589-4_S947s _1_1_947_947 Q7Z589-4 Q7Z589-7|Q7Z589-4|Q7Z589-5|Q7Z589-6|E9PMC9 Isoform 4 of BRCA2-interacting transcriptional repressor EMSY HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.7940.7940.2 15 15 2.229 4 1 1 0 779.9158 1478.8579 S947s TMT10 942 (R) SALTQsQSAK (Q) S(0.0)ALT(0.0)QS(0.99)QS(0.0)AK K:TMT10,s:Phosphorylated S EMSY 142030.9 4 8 879.1 207.7 HUMAN 1 -5.987 -5.8347 YRSGRRKSAGNIPLS-p O15021;S1373-p YRSGRRKSAGNIPLS 0.52190969118178 0.00925004074850009 -0.0863333333333333 0.578333333333333 5.22152613172995 28.7288802822375 -0.0863333333333333 0.578333333333333 0.300502013851626 0.00134002213348574 -1.14450334172278 6.04546156061351 O15021 MAST4 O15021.S1373.p_MAST4 O15021_S1373s _1_1_1373_1373 O15021 O15021|J3QT34|O15021-1|E7EWQ5|O15021-3|O15021-2 Microtubule-associated serine/threonine-protein kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.20849.20849.2 12.94 12.94 6.083 2 1 1 0 752.9072 1424.8423 S1373s TMT10 1373 (K) sAGNIPLSPLAR (T) S(0.99)AGNIPLS(0.0)PLAR s:Phosphorylated S MAST4 286597.7 4 6 121.99 549.41 HUMAN 1 -5.2215 28.7289 YRTQSSASLAASYAA-p Q96PK6;S523-p YRTQSSASLAASYAA 0.280234440802158 0.905993964620903 0.187 0.022 10.4410036446151 0.599232169404684 0.187 0.022 0.0903440666523986 0.871117589521051 2.05844298737108 0.170074360761584 Q96PK6 RBM14 Q96PK6.S523.p_RBM14 Q96PK6_S523s _1_1_523_523 Q96PK6 Q96PK6 RNA-binding protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12366.12366.4 18.31 18.31 1.151 8 1 1 0 694.3301 2694.3433 S523s TMT10 518 (R) TQSSAsLAASYAAQQHPQAAASYR (G) T(0.0)QS(0.0)S(0.0)AS(0.99)LAAS(0.0)Y(0.0)AAQQHPQAAAS(0.0)Y(0.0)R s:Phosphorylated S RBM14 69661.6 3 11 151.1 510.8 HUMAN 1 10.441 0.5992 YRVDENMTASTYSLN-p Q9HCD6-2;T233-p YRVDENMTASTYSLN 0.223892436900245 0.950954204617617 0.194333333333333 -0.00666666666666665 12.4865992410707 0.312680505663628 0.194333333333333 -0.00666666666666666 0.0564079187216239 0.930533364400268 2.41895318479547 -0.0912987957678185 Q9HCD6 TANC2 Q9HCD6.2.T233.p_TANC2 Q9HCD6-2_T233t _1_1_233_233 Q9HCD6-2 Q9HCD6-2 Isoform 2 of Protein TANC2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15141.15141.3 10.92 10.92 1.771 5 1 1 0 793.0501 2297.1645 T233t Hydrogen 228 (R) VDENMtASTYSLNKIPER (N) VDENMT(0.99)AS(0.0)T(0.0)Y(0.0)S(0.0)LNKIPER K:TMT10-Lys-Only,t:Phosphorylated T TANC2 222282.4 2 4 348.1 351.89 HUMAN 1 12.4866 -0.3127 YRVPSSQSMEDRGYS-p O95049-3;S390-p YRVPSSQSMEDRGYS 0.45453088270964 0.164721327820138 0.104666666666667 0.154 6.31629898188742 10.2983851311223 0.104666666666667 0.154 0.233544746159231 0.0933601384082121 1.34072001009205 2.0327513595213 O95049 TJP3 O95049.3.S390.p_TJP3 O95049-3_S390s _1_1_390_390 O95049-3 O95049-3|O95049-4|O95049-5 Isoform 3 of Tight junction protein ZO-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.15085.15085.3 16.77 12.04 1.117 7 1 1 0 820.0322 2378.1132 S390s TMT10 377 (R) ESSYDIYRVPSSQsMEDR (G) ES(0.0)S(0.0)Y(0.0)DIY(0.0)RVPS(0.0)S(0.0)QS(0.99)MEDR s:Phosphorylated S TJP3 103593.6 7 8 125.1 544.41 HUMAN 1 6.3163 10.2984 YRVSSVSSDEIWL__-p Q86YD3;S361-p YRVSSVSSDEIWL__ 0.886118944763575 0.0533910147185349 -0.023 -0.255 1.02633847929307 16.96906968858 -0.023 -0.255 0.789525483108915 0.0200952323073965 -0.28047217113577 -3.25407136205151 Q86YD3 TMEM25 Q86YD3.S361.p_TMEM25 Q86YD3_S361s _1_1_361_361 Q86YD3 Q86YD3|Q86YD3-2 Transmembrane protein 25 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.32108.32108.2 9.82 9.82 9.825 4 1 1 0 765.8683 1450.7627 S361s TMT10 356 (R) VSSVSsDEIWL (-) VS(0.0)S(0.0)VS(0.0)S(0.99)DEIWL s:Phosphorylated S TMEM25 39512.3 1 1 6747.1 9.82 HUMAN 1 -1.0263 -16.9691 YRWTQTLSELDLAVP-p Q9Y266;S179-p YRWTQTLSELDLAVP 0.29318165199096 0.0320849526179946 -0.208333333333333 0.286 10.0543627460262 20.1628642718461 -0.208333333333333 0.286 0.0987560532983863 0.00963193565820614 -1.99115673506485 3.91029317868714 Q9Y266 NUDC Q9Y266.S179.p_NUDC Q9Y266_S179s _1_1_179_179 Q9Y266 Q9Y266 Nuclear migration protein nudC HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.36976.36976.3 20.52 16.58 2.895 3 1 1 0 869.095 2525.306 S179s TMT10 174 (R) WTQTLsELDLAVPFCVNFR (L) WT(0.0)QT(0.0)LS(0.99)ELDLAVPFCVNFR C:Carbamidomethylation,s:Phosphorylated S NUDC 38299.3 1 5 739.1 234.62 HUMAN 1 -10.0544 20.1629 YRYGHSKSPHFREKS-p Q86U06;S142-p YRYGHSKSPHFREKS 0.123401035738524 0.0323400986243241 -0.879666666666667 0.741 18.9008869685906 20.108360961011 -0.879666666666667 0.741 0.0128798647669144 0.00975357670858034 -3.64693818559298 3.89857117201395 Q86U06 RBM23 Q86U06.S142.p_RBM23 Q86U06_S142s _1_1_142_142 Q86U06 Q86U06|Q86U06-2|Q86U06-5|Q86U06-3 Probable RNA-binding protein 23 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.5249.5249.3 10.77 4.25 99 1 1 1 0 480.2583 1358.7945 S142s TMT10 142 (K) sPHFREK (S) S(1.0)PHFREK K:TMT10,s:Phosphorylated S RBM23 49015.1 1 5 1534.1 133.46 HUMAN 1 -18.9009 20.1084 YRYPRPASVPPSPSL-p P13807;S641-p YRYPRPASVPPSPSL 0.871036397965817 0.0827361607772573 0.029 0.213 1.17447076354123 14.3338881342437 0.029 0.213 0.763049871667604 0.0368647409610671 0.317087632816797 2.75273040954965 P13807 GYS1 P13807.S641.p_GYS1 P13807_S641sS645s_2_2_641_645 P13807 P13807|P13807-2 Glycogen [starch] synthase, muscle HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19632.19632.4 12.01 12.01 1.466 8 2 2 0 1074.248 4134.0307 S641s S645s TMT10 616 (K) AFPEHFTYEPNEADAAQGYRYPRPAsVPPsPSLSR (H) AFPEHFT(0.0)Y(0.0)EPNEADAAQGY(0.0)RY(0.0)PRPAS(0.99)VPPS(0.99)PS(0.0)LS(0.0)R s:Phosphorylated S GYS1 84582.8 10 7 1394.1 146.91 HUMAN 1 1.1745 14.3339 YRYQDEDTPPQEHIS-p Q12959-2;T115-p YRYQDEDTPPQEHIS 0.210044301362565 0.0529773882018352 0.188 0.239666666666667 13.0770521870355 17.0152206036422 0.188 0.239666666666667 0.0492373625324298 0.0198828181133554 2.524960630023 3.26314396801918 Q12959 DLG1 Q12959.2.T115.p_DLG1 Q12959-2_T115t _1_1_115_115 Q12959-2 Q12959-2|Q12959-7|Q12959-4|A0A0C4DFT3|Q12959-6|Q12959-3 Isoform 2 of Disks large homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.22162.22248.5 24.53 18.5 3.231 6 1 1 0 878.0423 4306.2032 T115t TMT10 108 (K) YRYQDEDtPPQEHISPQITNEVIGPELVHVSEK (N) Y(0.0)RY(0.0)QDEDT(0.99)PPQEHIS(0.0)PQIT(0.0)NEVIGPELVHVS(0.0)EK K:TMT10,t:Phosphorylated T DLG1 103604.4 3 9 196.1 460.79 HUMAN 1 13.0771 17.0152 YSAAAAPSPVLGNIP-p Q9BWW4-2;S99-p YSAAAAPSPVLGNIP 0.224289987484359 0.0628368760762089 0.185333333333333 0.229 12.4714922341925 15.999785290788 0.185333333333333 0.229 0.0566044762854794 0.025120106187859 2.41625435029694 3.06598268259442 Q9BWW4 SSBP3 Q9BWW4.2.S99.p_SSBP3 Q9BWW4-2_S99s_1_1_99_99 Q9BWW4-2 Q9BWW4-2|A0A087WVT6 Isoform 2 of Single-stranded DNA-binding protein 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35687.35687.5 15.59 9.2 2.41 4 1 1 0 907.2399 4451.1943 S99s N104n TMT10 88 (K) AFHDYSAAAAPsPVLGnIPPNDGMPGGPIPPGFFQPFMSPR (Y) AFHDY(0.0)S(0.0)AAAAPS(0.99)PVLGN(0.99)IPPN(0.0)DGMPGGPIPPGFFQPFMS(0.0)PR s:Phosphorylated S,n:Deamidated SSBP3 37867.8 3 1 2558.1 78.64 HUMAN 1 12.4715 15.9998 YSAAALQSDLEDSLY-p A0A087X165;S479-p YSAAALQSDLEDSLY 0.377838045905345 0.563951511645017 0.118333333333333 0.0546666666666667 7.81301225944586 3.35263660570211 0.118333333333333 0.0546666666666667 0.165462192230815 0.462100394658676 1.60270559882174 0.791051462165747 A0A087X165 NotFound A0A087X165.S479.p_NotFound A0A087X165_S479s _1_1_479_479 A0A087X165 A0A087X165|Q9C0H9-5|Q9C0H9-2 SRC kinase-signaling inhibitor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.33027.33027.3 14.71 14.71 3.737 8 1 1 0 900.7837 2620.3758 S479s TMT10 468 (R) SLSTYSAAALQsDLEDSLYK (A) S(0.0)LS(0.0)T(0.0)Y(0.0)S(0.0)AAALQS(0.99)DLEDS(0.0)LY(0.0)K K:TMT10,s:Phosphorylated S SRCIN1 130745.5 1 15 98.1 603.22 HUMAN 1 7.813 3.3526 YSADQGDSSEGGTLA-p Q6ZRP7;S578-p YSADQGDSSEGGTLA 0.399942889360242 0.560845518091929 -0.222 0.101666666666667 7.34517791154373 3.38618304076692 -0.222 0.101666666666667 0.184281699523401 0.458544718816182 -1.52130970192089 0.797695396445965 Q6ZRP7 QSOX2 Q6ZRP7.S578.p_QSOX2 Q6ZRP7_S578s _1_1_578_578 Q6ZRP7 Q6ZRP7 Sulfhydryl oxidase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.18657.18657.4 21.75 21.75 1.117 6 1 1 0 881.9087 3444.6291 S578s TMT10 565 (R) DNLLDTYSADQGDsSEGGTLARGEEEEK (R) DNLLDT(0.0)Y(0.0)S(0.0)ADQGDS(0.99)S(0.0)EGGT(0.0)LARGEEEEK K:TMT10,s:Phosphorylated S QSOX2 78269 3 1 4673.1 28.12 HUMAN 1 -7.3452 3.3862 YSCRENYSDSEEEDD-p Q9Y2U8;S259-p YSCRENYSDSEEEDD 0.464201890813923 0.566896273478345 0.102666666666667 0.059 6.14989650434133 3.32478034187394 0.102666666666667 0.059 0.242666792372475 0.465073898150372 1.31122275155582 0.785523681432753 Q9Y2U8 LEMD3 Q9Y2U8.S259.p_LEMD3 Q9Y2U8_S259sS261s_2_2_259_261 Q9Y2U8 Q9Y2U8 Inner nuclear membrane protein Man1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_24.7461.7461.2 10.45 10.45 1.664 5 2 2 0 1225.933 2290.9269 S259s S261s TMT10 256 (R) ENYsDsEEEDDDDVASSR (Q) ENY(0.0)S(0.99)DS(0.99)EEEDDDDVAS(0.0)S(0.0)R s:Phosphorylated S LEMD3 100851.5 5 21 412.1 321.94 HUMAN 1 6.1499 3.3248 YSDASDDSFSEPRIA-p Q9NRF8;S574-p YSDASDDSFSEPRIA 0.309992484198329 0.120441680239704 0.189333333333333 0.166666666666667 9.50969062511709 12.1203557091718 0.189333333333333 0.166666666666667 0.11195176308078 0.0613711737007341 1.89663777795188 2.35251298647425 Q9NRF8 CTPS2 Q9NRF8.S574.p_CTPS2 Q9NRF8_S568sS571sS574s_3_3_568_574 Q9NRF8 Q9NRF8 CTP synthase 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.13847.13847.3 8.67 8.67 1.101 8 3 3 0 863.992 2350.0632 S568s S571s S574s TMT10 561 (K) LSSSDRYsDAsDDsFSEPR (I) LS(0.0)S(0.0)S(0.0)DRY(0.0)S(0.99)DAS(0.99)DDS(0.99)FS(0.0)EPR s:Phosphorylated S CTPS2 66361 14 12 2509.2 80.59 HUMAN 1 9.5097 12.1204 YSDEQLNSGRQSPSQ-p P25054;S1038-p YSDEQLNSGRQSPSQ 0.420320976430283 0.0529773882018352 -0.124 -0.33 6.94401317817192 17.0152627854446 -0.124 -0.33 0.202115063399981 0.0198826249980694 -1.45120941385534 -3.26315226537864 P25054 APC P25054.S1038.p_APC P25054_S1038sS1042s_2_2_1038_1042 P25054 P25054|P25054-3|P25054-2 Adenomatous polyposis coli protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.7178.7178.3 10.89 9.25 1.157 5 2 2 0 828.6845 2324.1064 S1038s S1042s TMT10 1031 (K) YSDEQLNsGRQsPSQNER (W) Y(0.0)S(0.0)DEQLNS(0.99)GRQS(0.99)PS(0.0)QNER s:Phosphorylated S APC 313808.5 1 57 33.1 890.71 HUMAN 1 -6.944 -17.0153 YSDLLSQSLNQPLTS-p Q6ZRS2;S250-p YSDLLSQSLNQPLTS 0.21223423524631 0.399477556879128 -0.507333333333333 -0.0846666666666666 12.9936445651004 5.30016807709114 -0.507333333333333 -0.0846666666666666 0.050192120441243 0.295109501359565 -2.50992177039175 -1.15854574873715 Q6ZRS2 SRCAP Q6ZRS2.S250.p_SRCAP Q6ZRS2_S250s _1_1_250_250 Q6ZRS2 Q6ZRS2|Q6ZRS2-2|Q6ZRS2-3|A0A0A0MS59 Helicase SRCAP HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.24720.24720.2 21.76 21.76 2.364 7 1 1 0 1210.1311 2339.2859 S250s TMT10 243 (K) YSDLLSQsLNQPLTSSK (A) Y(0.0)S(0.0)DLLS(0.0)QS(0.99)LNQPLT(0.0)S(0.0)S(0.0)K K:TMT10,s:Phosphorylated S SRCAP 345203 3 1 219.1 428.72 HUMAN 1 -12.9936 -5.3002 YSDLYPDSDDSSEDQ-p Q70CQ2;S1469-p YSDLYPDSDDSSEDQ 0.0856008445774509 0.00396881289998424 0.477333333333333 0.740666666666667 22.8515049069891 35.4052859118477 0.477333333333333 0.740666666666667 0.00518620296707592 0.000288052340820364 4.51941069956994 8.24461640598353 Q70CQ2 USP34 Q70CQ2.S1469.p_USP34 Q70CQ2_S1469s _1_1_1469_1469 Q70CQ2 Q70CQ2|Q70CQ2-2|Q70CQ2-3 Ubiquitin carboxyl-terminal hydrolase 34 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.16538.16538.3 15.18 15.18 1.687 10 1 1 0 1098.1379 3212.4279 S1469s TMT10 1457 (R) ESTGSYSDLYPDsDDSSEDQVENSK (N) ES(0.0)T(0.0)GS(0.0)Y(0.0)S(0.0)DLY(0.0)PDS(0.99)DDS(0.0)S(0.0)EDQVENS(0.0)K K:TMT10,s:Phosphorylated S USP34 409988.3 1 3 713.1 238.32 HUMAN 1 22.8515 35.4053 YSDNDICSQESEDNF-p A0A0C4DGZ1;S83-p YSDNDICSQESEDNF 0.574777890570195 0.00849512656348506 -0.095 0.513666666666667 4.42209629211429 29.3911753718494 -0.095 0.513666666666667 0.361235456134709 0.00115048897919404 -0.997001642117136 6.23937833018806 A0A0C4DGZ1 NotFound A0A0C4DGZ1.S83.p_NotFound A0A0C4DGZ1_S77sS83s_2_2_77_83 A0A0C4DGZ1 A0A0C4DGZ1|Q8N5P1 Zinc finger CCCH domain-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.22049.22049.4 19.66 16.02 1.634 5 2 2 0 783.8204 2972.3144 S77s S83s TMT10 72 (K) DYDVYsDNDICsQESEDNFAK (E) DY(0.0)DVY(0.0)S(0.99)DNDICS(0.99)QES(0.0)EDNFAK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ZC3H8 34999.7 2 7 1997.1 103.4 HUMAN 1 -4.4221 29.3912 YSDRSGSSSPDSEIT-p P17812;S574-p YSDRSGSSSPDSEIT 0.340030512994892 0.0395258109750821 -0.317 0.274 8.71502706570493 18.8210311066117 -0.317 0.274 0.134430338880013 0.0131188839209398 -1.75903365454382 3.62723274058169 P17812 CTPS1 P17812.S574.p_CTPS1 P17812_S574sS575s_2_2_574_575 P17812 P17812|P17812-2 CTP synthase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.21360.21360.2 8.71 8.71 1.318 6 2 2 0 1027.9689 1895.001 S574s S575s TMT10 571 (R) SGSssPDSEITELK (F) S(0.0)GS(0.0)S(0.99)S(0.99)PDS(0.0)EIT(0.0)ELK K:TMT10,s:Phosphorylated S CTPS1 67373.8 8 3 2509.1 80.59 HUMAN 1 -8.715 18.821 YSDYDYHSSSEKLKE-p A0A1B0GTW1;S489-p YSDYDYHSSSEKLKE 0.140764808605189 0.417343323985494 0.294 0.101333333333333 17.4132097568676 5.04776744703375 0.294 0.101333333333333 0.0181417435837854 0.312768678610461 3.34446838934115 1.11257789696682 A0A1B0GTW1 NotFound A0A1B0GTW1.S489.p_NotFound A0A1B0GTW1_S489s _1_1_489_489 A0A1B0GTW1 A0A1B0GTW1|Q9UDY2-7 Tight junction protein ZO-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.4632.4632.4 15.77 9.61 1.101 7 1 1 0 610.7801 2360.1308 S489s TMT10 479 (R) RHQYSDYDYHsSSEK (L) RHQY(0.0)S(0.0)DY(0.0)DY(0.0)HS(0.99)S(0.0)S(0.0)EK K:TMT10,s:Phosphorylated S TJP2 141123.7 3 12 41.1 827.72 HUMAN 1 17.4132 5.0478 YSEADGLSERTTPSK-p Q9H4G0;S75-p YSEADGLSERTTPSK 0.299022449964478 0.311457864458608 -0.297666666666667 0.154333333333333 9.8574648308955 6.69524747824446 -0.297666666666667 0.154333333333333 0.103336445029751 0.214030296033337 -1.95695754498026 1.40718324498191 Q9H4G0 EPB41L1 Q9H4G0.S75.p_EPB41L1 Q9H4G0_S75s _1_1_75_75 Q9H4G0 Q9H4G0|A0A0C4DH22|Q9H4G0-2|Q9H4G0-3|Q9H4G0-4 Band 4.1-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.10786.10786.3 15.66 13.27 2.246 6 1 1 0 765.3702 2214.129 S75s TMT10 67 (K) DYSEADGLsERTTPSK (A) DY(0.0)S(0.0)EADGLS(0.99)ERT(0.0)T(0.0)PS(0.0)K K:TMT10,s:Phosphorylated S EPB41L1 99071.6 6 5 174.1 483.37 HUMAN 1 -9.8575 6.6952 YSEKLKFSDDEEEEE-p Q5JSZ5;S388-p YSEKLKFSDDEEEEE 0.766527313332562 0.017601944334226 -0.0606666666666667 -0.442333333333333 2.21458091198044 24.1758775734914 -0.0606666666666667 -0.442333333333333 0.60053995736624 0.00382306993550815 -0.555815042846939 -4.83226092359648 Q5JSZ5 PRRC2B Q5JSZ5.S388.p_PRRC2B Q5JSZ5_S388s _1_1_388_388 Q5JSZ5 Q5JSZ5|Q5JSZ5-5 Protein PRRC2B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.19158.19158.2 18.97 12.79 99 1 1 1 0 1232.1272 2383.2847 S388s TMT10 385 (K) LKFsDDEEEEEVVK (D) LKFS(1.0)DDEEEEEVVK K:TMT10,s:Phosphorylated S PRRC2B 244103.4 17 54 36.2 882.05 HUMAN 1 -2.2146 -24.1759 YSFGRFDSSIIRIKN-p Q9C0G0;S1358-p YSFGRFDSSIIRIKN 0.149214344489706 0.0145497038675128 0.279666666666667 0.564333333333333 16.655465736567 25.4490769188153 0.279666666666667 0.564333333333333 0.0215999838454264 0.00285162430813582 3.19508043820676 5.15183952019117 Q9C0G0 ZNF407 Q9C0G0.S1358.p_ZNF407 Q9C0G0_S1358s _1_1_1358_1358 Q9C0G0 Q9C0G0|Q9C0G0-2|Q9C0G0-3 Zinc finger protein 407 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.18475.18475.2 9.29 3.22 1.297 2 1 1 0 573.7919 1066.6094 S1358s TMT10 1356 (R) FDsSIIR (I) FDS(0.99)S(0.0)IIR s:Phosphorylated S ZNF407 251813.1 1 5 2917.1 66.03 HUMAN 1 16.6555 25.4491 YSFNVALSLNNKIGQ-p Q86T82;S573-p YSFNVALSLNNKIGQ 0.205202263113483 0.0420407194621464 -0.23 -0.263 13.3022364564369 18.4452467492426 -0.23 -0.263 0.0467494336945041 0.0143045870540808 -2.56567363310667 -3.54994454259654 Q86T82 USP37 Q86T82.S573.p_USP37 Q86T82_S573s _1_1_573_573 Q86T82 Q86T82|Q86T82-2 Ubiquitin carboxyl-terminal hydrolase 37 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20983.20983.3 12.86 10.22 12.855 3 1 1 0 688.7073 1984.138 S573s TMT10 565 (K) RYSFNVALsLNNK (I) RY(0.0)S(0.0)FNVALS(0.99)LNNK K:TMT10,s:Phosphorylated S USP37 111080.6 3 2 1897.1 108.46 HUMAN 1 -13.3022 -18.4452 YSGAYGASVSDEELK-p F8WAR4;S56-p YSGAYGASVSDEELK 0.777313351423015 0.0802080299078809 -0.0426666666666667 0.320666666666667 2.10116465339148 14.54130722521 -0.0426666666666667 0.320666666666667 0.616429670914607 0.0351454636855499 -0.531090922219245 2.7911040516973 F8WAR4 NotFound F8WAR4.S56.p_NotFound F8WAR4_S56s _1_1_56_56 F8WAR4 F8WAR4|C9JRZ6|Q9NX63 MICOS complex subunit HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.17102.17102.3 15.01 14.08 1.984 5 1 1 0 705.3402 2034.0432 S56s TMT10 49 (R) YSGAYGAsVSDEELK (R) Y(0.0)S(0.0)GAY(0.0)GAS(0.99)VS(0.0)DEELK K:TMT10,s:Phosphorylated S CHCHD3 27848.9 1 3 2722.1 72.89 HUMAN 1 -2.1012 14.5413 YSHKGHLSEGLVTKW-p Q16659;S189-p YSHKGHLSEGLVTKW 0.0360961121648541 0.00112568182952083 -0.628666666666667 -1.06266666666667 33.0532875544074 49.1448219824273 -0.628666666666667 -1.06266666666667 0.000495075283182447 1.21763690283317e-05 -7.41763612052784 -15.1217069043925 Q16659 MAPK6 Q16659.S189.p_MAPK6 Q16659_S189s _1_1_189_189 Q16659 Q16659 Mitogen-activated protein kinase 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.13263.13263.2 14.33 5.38 4.62 2 1 1 0 789.9368 1498.8993 S189s TMT10 186 (K) GHLsEGLVTK (W) GHLS(0.99)EGLVT(0.0)K K:TMT10,s:Phosphorylated S MAPK6 83306.9 1 1 2324.1 87.84 HUMAN 1 -33.0533 -49.1448 YSHSGSSSPDTKVKP-p Q9UQ35;S974-p YSHSGSSSPDTKVKP 0.0461335186156422 0.0579257352109434 0.5705 0.282 29.6703702012873 16.4802452350891 0.5705 0.282 0.00107885475457685 0.0224892761100675 6.33245653705789 3.15863874431912 Q9UQ35 SRRM2 Q9UQ35.S974.p_SRRM2 Q9UQ35_S973sS974s_2_2_973_974 Q9UQ35 Q9UQ35|Q9UQ35-2 Serine/arginine repetitive matrix protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.5917.6156.3 13.91 13.91 1.239 7 2 2 0 624.2735 1710.8699 S973s S974s TMT10 967 (R) YSHSGSssPDTK (V) Y(0.0)S(0.0)HS(0.0)GS(0.0)S(0.99)S(0.99)PDT(0.0)K K:TMT10,s:Phosphorylated S SRRM2 300351.7 9 196 2.1 3310.34 HUMAN 2 29.6704 16.4802 YSHVSQHSPSKKALY-p Q14690;S1360-p YSHVSQHSPSKKALY 0.995103621521408 0.00539882296906826 0.00100000000000001 -0.636666666666667 0.042149050073875 32.9069228533034 0.001 -0.636666666666667 0.990341765809233 0.000512044510654066 0.0126743611305887 -7.35452164882389 Q14690 PDCD11 Q14690.S1360.p_PDCD11 Q14690_S1360s _1_1_1360_1360 Q14690 Q14690 Protein RRP5 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.3870.3870.3 16.85 16.85 3.128 5 1 1 0 598.9683 1714.9277 S1360s TMT10 1353 (R) YSHVSQHsPSK (K) Y(0.0)S(0.0)HVS(0.0)QHS(0.99)PS(0.0)K K:TMT10,s:Phosphorylated S PDCD11 210066.3 5 4 1510.1 135.04 HUMAN 1 0.0421 -32.9069 YSILQGDSPTKWRTE-p O15042;S485-p YSILQGDSPTKWRTE 0.152173457127959 0.0102390772919515 0.325 -0.499 16.4639147395879 27.9401834363094 0.325 -0.499 0.0225740002771793 0.00160687338082938 3.15778133946846 -5.82068745568428 O15042 U2SURP O15042.S485.p_U2SURP O15042_S485s _1_1_485_485 O15042 O15042|O15042-2|O15042-3 U2 snRNP-associated SURP motif-containing protein HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.27172.27172.3 18.84 18.84 2.725 4 1 1 0 801.7812 2323.3629 S485s TMT10 475 (R) WKLYSILQGDsPTK (W) WKLY(0.0)S(0.0)ILQGDS(0.99)PT(0.0)K K:TMT10,s:Phosphorylated S U2SURP 118746.2 14 10 360.1 345.29 HUMAN 1 16.4639 -27.9402 YSIRHSISMPAMRNS-p O43399-3;S157-p YSIRHSISMPAMRNS 0.665261908909664 0.766372728587506 0.0646666666666667 -0.032 3.30990692371527 1.59635832007026 0.0646666666666667 -0.032 0.466669381681704 0.692411333706553 0.782684678331774 -0.417388492786365 O43399 TPD52L2 O43399.3.S157.p_TPD52L2 O43399-3_S157s _1_1_157_157 O43399-3 O43399-7|O43399-5|J3KNE7|O43399-3|Q16890|O43399-4|Q16890-5|E9PNK6|Q16890-2 Isoform 3 of Tumor protein D54 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.11330.11330.2 12.08 8.57 1.292 2 1 1 0 669.8156 1258.6598 S157s TMT10 154 (R) HSIsMPAMR (N) HS(0.0)IS(0.99)MPAMR s:Phosphorylated S TPD52L2 22573.8 7 19 793.99 224.4 HUMAN 1 3.3099 -1.5964 YSKEKSNSFSDKGEE-p Q8WVS4;S247-p YSKEKSNSFSDKGEE 0.717979850279593 0.366796835178139 -0.0706666666666667 0.0996666666666667 2.71560964019869 5.77611807548288 -0.0706666666666667 0.0996666666666667 0.535105033213674 0.264477172012836 -0.662032829780475 1.24429056504583 Q8WVS4 WDR60 Q8WVS4.S247.p_WDR60 Q8WVS4_S247s _1_1_247_247 Q8WVS4 Q8WVS4 WD repeat-containing protein 60 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.6554.6554.2 9.92 9.92 2.166 3 1 1 0 897.4288 1713.8808 S247s TMT10 245 (K) SNsFSDKGEER (H) S(0.0)NS(0.99)FS(0.0)DKGEER K:TMT10,s:Phosphorylated S WDR60 123367.3 7 1 3792.1 42.99 HUMAN 1 -2.7156 5.7761 YSKESLGSEEESGKD-p Q9Y5B9;S982-p YSKESLGSEEESGKD 0.188778224113783 0.944232842957325 -0.539333333333333 0.015 14.1851032297953 0.357943093706773 -0.539333333333333 0.015 0.0381495726194207 0.92088561849424 -2.72696747917804 0.1040295840032 Q9Y5B9 SUPT16H Q9Y5B9.S982.p_SUPT16H Q9Y5B9_S982s _1_1_982_982 Q9Y5B9 Q9Y5B9 FACT complex subunit SPT16 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.19709.19709.3 19.19 19.19 2.204 3 1 1 0 988.1133 2882.358 S982s TMT10 978 (K) ESLGsEEESGKDWDELEEEAR (K) ES(0.0)LGS(0.99)EEES(0.0)GKDWDELEEEAR K:TMT10,s:Phosphorylated S SUPT16H 120482.1 1 6 1519.1 134.4 HUMAN 1 -14.1851 0.3579 YSKFQPQSPDFLDIT-p Q92890-1;S165-p YSKFQPQSPDFLDIT 0.185461409283341 0.0958823980776962 -0.287666666666667 -0.190333333333333 14.3767521901178 13.4645676401235 -0.287666666666667 -0.190333333333333 0.0365026825029213 0.045034281272832 -2.76235716670479 -2.59364195354135 Q92890 UFD1L Q92890.1.S165.p_UFD1L Q92890-1_S165s _1_1_165_165 Q92890-1 Q92890-1|Q92890-3 Isoform Long of Ubiquitin recognition factor in ER-associated degradation protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28538.28538.3 10.94 6.83 3.398 2 1 1 0 762.3918 2205.1956 S165s TMT10 161 (K) FQPQsPDFLDITNPK (A) FQPQS(0.99)PDFLDIT(0.0)NPK K:TMT10,s:Phosphorylated S UFD1 39066.9 2 3 833.1 215.39 HUMAN 1 -14.3768 -13.4646 YSKQYAGYDYSQQGR-p Q969M3-3;Y42-p YSKQYAGYDYSQQGR 0.771982430720165 0.0131932133104267 -0.0526666666666667 -0.543333333333333 2.1508066588533 26.1688130406561 -0.0526666666666667 -0.543333333333333 0.60942369233088 0.00241612108820274 -0.541946169727198 -5.3389500737382 Q969M3 YIPF5 Q969M3.3.Y42.p_YIPF5 Q969M3-3_Y42y _1_1_42_42 Q969M3-3 Q969M3-3 Isoform 3 of Protein YIPF5 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.8832.8871.2 20.93 20.93 4.159 4 1 1 0 872.8803 1664.7866 Y42y TMT10 38 (K) QYAGyDYSQQGR (F) QY(0.0)AGY(0.99)DY(0.0)S(0.0)QQGR y:Phosphorylated Y YIPF5 29563.3 2 1 159.1 20.93 HUMAN 1 -2.1508 -26.1688 YSKYYSDSDDELTVE-p Q8NFC6;S484-p YSKYYSDSDDELTVE 0.552777326044719 0.817460550044206 -0.0916666666666667 -0.0436666666666667 4.75202108695035 1.22472746282341 -0.0916666666666667 -0.0436666666666667 0.334809591730957 0.7542707278707 -1.05841230685997 -0.329302829856788 Q8NFC6 BOD1L1 Q8NFC6.S484.p_BOD1L1 Q8NFC6_S484s _1_1_484_484 Q8NFC6 Q8NFC6 Biorientation of chromosomes in cell division protein 1-like 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.15000.15000.3 10.82 10.82 2.454 5 1 1 0 676.9595 1948.8973 S484s TMT10 480 (K) YYSDsDDELTVEQR (R) Y(0.0)Y(0.0)S(0.0)DS(0.99)DDELT(0.0)VEQR s:Phosphorylated S BOD1L1 332628.7 1 4 97.1 603.4 HUMAN 1 -4.752 -1.2247 YSLFLDESRSTQYMK-p Q9Y230;S437-p YSLFLDESRSTQYMK 0.32553307217158 0.0490711932923868 0.365 0.284333333333333 9.12843841144378 17.5093928109516 0.365 0.284333333333333 0.12222390605044 0.0177443754845207 1.83059857801283 3.36098990010937 Q9Y230 RUVBL2 Q9Y230.S437.p_RUVBL2 Q9Y230_S437s _1_1_437_437 Q9Y230 Q9Y230|Q9Y230-2 RuvB-like 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.26684.26684.3 16.72 11.84 2.223 6 1 1 0 835.7569 2425.2838 S437s TMT10 429 (R) VYSLFLDEsRSTQYMK (E) VY(0.0)S(0.0)LFLDES(0.99)RS(0.0)T(0.0)QY(0.0)MK K:TMT10,s:Phosphorylated S RUVBL2 51326.8 1 7 1680.1 121.4 HUMAN 1 9.1284 17.5094 YSLKLCMSLMQNKQF-p A0A087WW66;S186-p YSLKLCMSLMQNKQF 0.674589372325876 0.0979329136426181 -0.114333333333333 0.269 3.20384254513778 13.3412653443828 -0.114333333333333 0.269 0.478206797892994 0.0463311911220004 -0.761519463445539 2.57129153879603 A0A087WW66 NotFound A0A087WW66.S186.p_NotFound A0A087WW66_S186s_1_1_186_186 A0A087WW66 Q99460|A0A087WW66|Q99460-2 26S proteasome non-ATPase regulatory subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.22703.22703.5 7.25 2.28 1.19 5 1 1 0 929.4684 4531.4404 M176m M185m S186s Hydrogen 159 (R) RLDVFEKTILESNDVPGmLAYSLKLCmsLMQNK (Q) RLDVFEKT(0.0)ILES(0.0)NDVPGM(0.99)LAY(0.0)S(0.0)LKLCM(0.99)S(0.99)LM(0.0)QNK K:TMT10-Lys-Only,C:Carbamidomethylation,m:Oxidized methionine,s:Phosphorylated S PSMD1 106876.4 1 1 1299.1 156.53 HUMAN 1 -3.2038 13.3413 YSLLRGGSDDSSKDP-p P09874;S782-p YSLLRGGSDDSSKDP 0.35380780935022 0.0335354303873466 0.184 0.289333333333333 8.38365872153343 19.8746978840013 0.184 0.289333333333333 0.145088879874601 0.0102927212579251 1.70165858998432 3.84853817333937 P09874 PARP1 P09874.S782.p_PARP1 P09874_S782s _1_1_782_782 P09874 P09874 Poly [ADP-ribose] polymerase 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.15477.15477.3 15.44 11.97 3.424 4 1 1 0 865.0941 2513.2974 S782s TMT10 780 (R) GGsDDSSKDPIDVNYEK (L) GGS(0.99)DDS(0.0)S(0.0)KDPIDVNY(0.0)EK K:TMT10,s:Phosphorylated S PARP1 113880.5 3 9 1179.1 169.18 HUMAN 1 8.3837 19.8747 YSMNFNMSSSRGPLP-p P38159;S141-p YSMNFNMSSSRGPLP 0.257569887431111 0.88919901789281 -0.267666666666667 -0.0173333333333333 11.1929871383745 0.716710867553884 -0.267666666666667 -0.0173333333333333 0.0759803493669592 0.84786930548226 -2.18995411007378 -0.201207361701823 P38159 RBMX P38159.S141.p_RBMX P38159_S141s _1_1_141_141 P38159 P38159|Q96E39|P38159-2|H3BT71 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_3.20601.20601.5 21.61 21.61 1.18 5 1 1 0 636.6965 3099.4851 S141s TMT10 126 (R) GGHMDDGGYSMNFNMsSSRGPLPVK (R) GGHMDDGGY(0.0)S(0.0)MNFNMS(0.99)S(0.0)S(0.0)RGPLPVK K:TMT10,s:Phosphorylated S RBMX 42331.1 17 9 102.1 595.29 HUMAN 1 -11.193 -0.7167 YSNRKYESDEDSLGS-p O00418;S470-p YSNRKYESDEDSLGS 0.015464429325557 0.00160137763209639 -0.962 -0.989666666666667 42.6734775183956 44.7324145878496 -0.962 -0.989666666666667 5.40321499019223e-05 3.36324527875885e-05 -11.4305165302548 -12.4793992581773 O00418 EEF2K O00418.S470.p_EEF2K O00418_S470sS474s_2_2_470_474 O00418 O00418 Eukaryotic elongation factor 2 kinase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.8810.8810.2 8.74 8.74 3.055 5 2 2 0 1074.4691 1987.9973 S470s S474s TMT10 467 (R) KYEsDEDsLGSSGR (V) KY(0.0)ES(0.99)DEDS(0.99)LGS(0.0)S(0.0)GR K:TMT10,s:Phosphorylated S EEF2K 82713.2 2 10 995.1 190.99 HUMAN 1 -42.6735 -44.7324 YSNSIVRSSRTTLDR-p Q9H1Z4;S85-p YSNSIVRSSRTTLDR 0.992216653451768 0.348972642817125 0.00166666666666666 0.135 0.0724164617911241 6.06194460582892 0.00166666666666666 0.135 0.983463743559467 0.247631301039361 0.0217016199961363 1.29527987627722 Q9H1Z4 WDR13 Q9H1Z4.S85.p_WDR13 Q9H1Z4_S85s _1_1_85_85 Q9H1Z4 Q9H1Z4 WD repeat-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.6477.6477.3 12.17 12.17 1.241 5 1 1 0 516.9291 1468.807 S85s TMT10 77 (R) AYSNSIVRsSR (T) AY(0.0)S(0.0)NS(0.0)IVRS(0.99)S(0.0)R s:Phosphorylated S WDR13 54322.7 1 3 3757.1 43.8 HUMAN 1 0.0724 6.0619 YSPDGKESPSDKKSK-p A8MXP9;S604-p YSPDGKESPSDKKSK 0.797029118738497 0.897527952892483 0.0363333333333333 -0.018 1.90119008354292 0.657373690485451 0.0363333333333333 -0.018 0.645477326671098 0.859533149951642 0.486806955728556 -0.185561227287219 A8MXP9 NotFound A8MXP9.S604.p_NotFound A8MXP9_S604s _1_1_604_604 A8MXP9 A8MXP9|P43243|D6REM6|P43243-2|B3KM87 Matrin-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.8514.8514.3 15.77 10.66 1.725 5 1 1 0 841.117 2441.3694 S604s TMT10 596 (R) SYSPDGKEsPSDKK (S) S(0.0)Y(0.0)S(0.0)PDGKES(0.99)PS(0.0)DKK K:TMT10,s:Phosphorylated S MATR3 100478.9 7 24 92.1 615.57 HUMAN 1 1.9012 -0.6574 YSPEDEPSPEAQPIA-p Q6ZSR9;S300-p YSPEDEPSPEAQPIA 0.624077384181967 0.0348633491105358 0.0943333333333333 0.345666666666667 3.80469496956352 19.6237982117191 0.0943333333333333 0.345666666666667 0.416418967539713 0.0109048621213861 0.879607822033975 3.79520815511378 Q6ZSR9 NotFound Q6ZSR9.S300.p_NotFound Q6ZSR9_S294sS300s_2_2_294_300 Q6ZSR9 Q6ZSR9 Uncharacterized protein FLJ45252 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.17589.17589.3 16.28 16.28 2.282 4 2 2 0 916.4202 2587.3081 S294s S300s TMT10 292 (R) HYsPEDEPsPEAQPIAAYK (I) HY(0.0)S(0.99)PEDEPS(0.99)PEAQPIAAY(0.0)K K:TMT10,s:Phosphorylated S 38203.6 1 4 3163.1 58.95 HUMAN 1 3.8047 19.6238 YSPSMTMSV______-p A0A087X159;S368-p YSPSMTMSV______ 0.665261908909664 0.101609362025616 0.088 0.573 3.31160800036535 13.1193693549936 0.088 0.573 0.46648662897053 0.0487599289928117 0.783022934379469 2.53119501276885 A0A087X159 SSBP2 A0A087X159.S368.p_SSBP2 A0A087X159_S368s _1_1_368_368 A0A087X159 A0A087X159|P81877|P81877-3|P81877-5|P81877-4 Single-stranded DNA-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.31745.31745.4 25.89 25.89 1.204 11 1 1 0 1208.526 4751.0956 S368s TMT10 328 (K) NSPNNMSLSNQPGTPRDDGEMGGNFLNPFQSESYSPSMTMsV (-) NS(0.0)PNNMS(0.0)LS(0.0)NQPGT(0.0)PRDDGEMGGNFLNPFQS(0.0)ES(0.0)Y(0.0)S(0.0)PS(0.0)MT(0.0)MS(0.99)V s:Phosphorylated S SSBP2 38925.1 1 3 3623.1 46.68 HUMAN 1 3.3116 13.1194 YSQPSARSEGEFKQT-p Q9Y624;S287-p YSQPSARSEGEFKQT 0.0404299711718947 0.0150246641265848 -0.768 -0.388666666666667 31.1383884463653 25.2268968782464 -0.768 -0.388666666666667 0.000769415897507189 0.00300130624693524 -6.78609831169436 -5.09503866378805 Q9Y624 F11R Q9Y624.S287.p_F11R Q9Y624_S287s _1_1_287_287 Q9Y624 Q9Y624|A0A087WY82|Q9Y624-2 Junctional adhesion molecule A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.12867.12867.4 16.03 16.03 2.131 4 1 1 0 649.1052 2513.4331 S287s TMT10 277 (K) KVIYSQPSARsEGEFK (Q) KVIY(0.0)S(0.0)QPS(0.0)ARS(0.99)EGEFK K:TMT10,s:Phosphorylated S F11R 32981.9 2 2 2495.1 81.23 HUMAN 1 -31.1384 -25.2269 YSQSAPGSPVSAQPV-p P85037;S472-p YSQSAPGSPVSAQPV 0.668417540705736 0.0172462309831495 -0.0633333333333333 0.425666666666667 3.27213399780017 24.3257171712155 -0.0633333333333334 0.425666666666667 0.470745958573759 0.00369341648172156 -0.775163973347048 4.86913916741041 P85037 FOXK1 P85037.S472.p_FOXK1 P85037_S472s _1_1_472_472 P85037 P85037|P85037-2 Forkhead box protein K1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.24474.24736.4 17.54 17.54 1.168 7 1 1 0 865.7169 3379.8812 S472s TMT10 465 (R) YSQSAPGsPVSAQPVIMAVPPRPSSLVAK (P) Y(0.0)S(0.0)QS(0.0)APGS(0.99)PVS(0.0)AQPVIMAVPPRPS(0.0)S(0.0)LVAK K:TMT10,s:Phosphorylated S FOXK1 75912.4 2 12 686.1 243.66 HUMAN 1 -3.2721 24.3257 YSQSNYNSPGSGQNY-p Q12906-7;S864-p YSQSNYNSPGSGQNY 0.585616421770961 0.595642313134134 -0.0866666666666667 0.104333333333333 4.27266383639249 3.04655020953545 -0.0866666666666667 0.104333333333333 0.37388119004793 0.495843904849227 -0.968903762227024 0.729748075102481 Q12906 ILF3 Q12906.7.S864.p_ILF3 Q12906-7_S864s _1_1_864_864 Q12906-7 Q12906-7 Isoform 7 of Interleukin enhancer-binding factor 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.10841.11047.3 33.95 30.52 1.698 14 1 1 0 1271.54 3732.6385 S864s TMT10 854 (K) QGGYSQSNYNsPGSGQNYSGPPSSYQSSQGGYGR (N) QGGY(0.0)S(0.0)QS(0.0)NY(0.0)NS(0.99)PGS(0.0)GQNY(0.0)S(0.0)GPPS(0.0)S(0.0)Y(0.0)QS(0.0)S(0.0)QGGY(0.0)GR s:Phosphorylated S ILF3 96205.6 7 18 130.1 537.24 HUMAN 1 -4.2727 3.0466 YSQYSQKSIEQAEEA-p P31629;S169-p YSQYSQKSIEQAEEA 0.0515638782216539 0.284430472365939 -0.783666666666667 -0.171 28.1669453684156 7.20041611491822 -0.783666666666667 -0.171 0.00152512508086157 0.190527815689465 -5.89322764136596 -1.49562626916102 P31629 HIVEP2 P31629.S169.p_HIVEP2 P31629_S169s _1_1_169_169 P31629 P31629 Transcription factor HIVEP2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.7379.7379.3 15.11 15.11 99 1 1 1 0 679.7045 1957.1322 S169s TMT10 169 (K) sIEQAEEAHKK (E) S(1.0)IEQAEEAHKK K:TMT10,s:Phosphorylated S HIVEP2 271273.5 1 2 465.2 303.46 HUMAN 1 -28.1669 -7.2004 YSRARIYSPVRSPSA-p Q5VTI5;S492-p YSRARIYSPVRSPSA 0.274203367926357 0.268353223732572 0.199666666666667 -0.136333333333333 10.6393307572393 7.52304947760735 0.199666666666667 -0.136333333333333 0.0863111542007365 0.176886648041824 2.09303666044403 -1.55183337344897 Q5VTI5 NotFound Q5VTI5.S492.p_NotFound Q5VTI5_S492s _1_1_492_492 Q5VTI5 A0A1B0GUN5|Q5VTI5|Q9Y2H5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.9592.9603.3 12.02 8 3.162 4 1 1 0 514.606 1461.8375 S492s TMT10 490 (R) IYsPVRSPSAR (F) IY(0.0)S(0.99)PVRS(0.0)PS(0.0)AR s:Phosphorylated S PLEKHA6 119745.7 4 17 52.1 743.36 HUMAN 1 10.6393 -7.523 YSRDAKISPPRSLRS-p O60333-2;S1370-p YSRDAKISPPRSLRS 0.904222813932841 0.959382678209962 -0.0203333333333333 0.00533333333333336 0.859331509071482 0.259422493826267 -0.0203333333333333 0.00533333333333336 0.820477827254618 0.942014853289185 -0.23821121709039 0.0761708419306964 O60333 KIF1B O60333.2.S1370.p_KIF1B O60333-2_S1370s _1_1_1370_1370 O60333-2 O60333-4|Q4R9M9|A0A087WWA3|O60333-2 Isoform 2 of Kinesin-like protein KIF1B HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.8163.8356.3 10.06 6.02 99 1 1 1 0 474.6019 1341.8255 S1370s TMT10 1366 (R) DAKIsPPR (S) DAKIS(1.0)PPR K:TMT10,s:Phosphorylated S KIF1B 200628.3 2 5 606.1 262.24 HUMAN 1 -0.8593 0.2594 YSRRLPRSPSPYSRR-p Q14004-2;S358-p YSRRLPRSPSPYSRR 0.473135474382633 0.563965995705293 0.160666666666667 0.075 5.98764113638544 3.35215006222319 0.160666666666667 0.075 0.251904477144049 0.462152167024551 1.28236162899819 0.790954997206793 Q14004 CDK13 Q14004.2.S358.p_CDK13 Q14004-2_S358s _1_1_358_358 Q14004-2 Q14004|Q14004-2 Isoform 2 of Cyclin-dependent kinase 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5583.5583.4 8.26 8.26 2.357 4 1 1 0 406.9687 1544.8859 S358s TMT10 354 (R) RLPRsPSPYSR (R) RLPRS(0.99)PS(0.0)PY(0.0)S(0.0)R s:Phosphorylated S CDK13 159173.6 3 4 145.1 520.12 HUMAN 1 5.9876 3.3522 YSRSLPGSALELRYS-p O75145;S512-p YSRSLPGSALELRYS 0.992725337073378 0.459279424057962 -0.00166666666666667 0.117 0.0672743216402566 4.5045528954688 -0.00166666666666666 0.117 0.984628875436128 0.354441618033661 -0.0201722855240148 1.01224005916589 O75145 PPFIA3 O75145.S512.p_PPFIA3 O75145_S512s _1_1_512_512 O75145 O75145|O75145-2|R4GN36 Liprin-alpha-3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.20260.20260.2 11.27 8.36 4.503 2 1 1 0 676.3611 1271.7521 S512s TMT10 508 (R) SLPGsALELR (Y) S(0.0)LPGS(0.99)ALELR s:Phosphorylated S PPFIA3 134064.6 1 8 248.2 410.18 HUMAN 1 -0.0673 4.5046 YSRWEDGSRDGVSLG-p B2RUZ4;S17-p YSRWEDGSRDGVSLG 0.178571551597383 0.333093047071185 0.275 0.156666666666667 14.7750579092617 6.32783302632217 0.275 0.156666666666667 0.0333038321512762 0.23292531815461 2.83636859944263 1.34242511402604 B2RUZ4 SMIM1 B2RUZ4.S17.p_SMIM1 B2RUZ4_S17s _1_1_17_17 B2RUZ4 B2RUZ4|H3BS66 Small integral membrane protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.16987.16987.3 9.38 9.38 1.14 6 1 1 0 868.7321 2524.2113 S17s TMT10 13 (R) WEDGsRDGVSLGAVSSTEEASR (C) WEDGS(0.99)RDGVS(0.0)LGAVS(0.0)S(0.0)T(0.0)EEAS(0.0)R s:Phosphorylated S SMIM1 8920.1 1 1 4524.1 30.33 HUMAN 1 14.7751 6.3278 YSSNYRRSPERPTGD-p Q5T200;S77-p YSSNYRRSPERPTGD 0.224767265517543 0.618028835500003 0.188333333333333 0.092 12.4501464101551 2.84002794893793 0.188333333333333 0.092 0.0568833753892386 0.51999265012004 2.41244205637582 0.687634961657981 Q5T200 ZC3H13 Q5T200.S77.p_ZC3H13 Q5T200_S77s _1_1_77_77 Q5T200 Q5T200|Q5T200-2 Zinc finger CCCH domain-containing protein 13 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3429.3429.4 14.05 8.52 3.753 2 1 1 0 412.9535 1568.8252 S77s Hydrogen 76 (R) RsPERPTGDLRER (M) RS(0.99)PERPT(0.0)GDLRER s:Phosphorylated S ZC3H13 197316.7 17 2 24.1 987.82 HUMAN 1 12.4501 2.84 YSSPTSLSPRAGSPF-p Q96JY6-5;S379-p YSSPTSLSPRAGSPF 0.557193531914855 0.249703639793911 0.120666666666667 0.183 4.68829693723364 7.9393281870213 0.120666666666667 0.183 0.339758480955714 0.160718985103526 1.04661425062645 1.62412319710914 Q96JY6 PDLIM2 Q96JY6.5.S379.p_PDLIM2 Q96JY6-5_S379s _1_1_379_379 Q96JY6-5 Q96JY6-5 Isoform 5 of PDZ and LIM domain protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.9425.9905.2 11.6 11.6 1.15 8 1 1 0 789.3743 1497.7747 S379s TMT10 370 (R) SSYSSPTSLsPR (A) S(0.0)S(0.0)Y(0.0)S(0.0)S(0.0)PT(0.0)S(0.0)LS(0.99)PR s:Phosphorylated S PDLIM2 63315 1 5 1306.1 155.86 HUMAN 1 4.6883 7.9393 YSSRDLPSHTKIKYR-p Q9P013;S37-p YSSRDLPSHTKIKYR 0.730220948141713 0.463486895284605 0.083 -0.158666666666667 2.590096930024 4.45348768790489 0.083 -0.158666666666667 0.550795403086087 0.35863381097951 0.635851626119107 -1.00269650172008 Q9P013 CWC15 Q9P013.S37.p_CWC15 Q9P013_S37s _1_1_37_37 Q9P013 Q9P013 Spliceosome-associated protein CWC15 homolog HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.6917.6917.3 7.63 4.78 2.426 2 1 1 0 445.9071 1255.7411 S37s TMT10 34 (R) DLPsHTK (I) DLPS(0.99)HT(0.0)K K:TMT10,s:Phosphorylated S CWC15 26680.9 1 1 4923.1 25.03 HUMAN 1 2.5901 -4.4535 YSSRRVQSPSSKSND-p Q7L4E1;S111-p YSSRRVQSPSSKSND 0.13430679397205 0.139309007862111 0.388333333333333 0.185333333333333 17.8864972767119 11.2781957457269 0.388333333333333 0.185333333333333 0.0162686034143074 0.0745041433283113 3.43933088352732 2.20389773764272 Q7L4E1 FAM73B Q7L4E1.S111.p_FAM73B Q7L4E1_S111s _1_1_111_111 Q7L4E1 Q7L4E1|Q7L4E1-3|Q7L4E1-2 Mitoguardin 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.3959.3959.3 8.46 3.62 2.266 3 1 1 0 476.2655 1346.8156 S111s TMT10 108 (R) RVQsPSSK (S) RVQS(0.99)PS(0.0)S(0.0)K K:TMT10,s:Phosphorylated S MIGA2 65929 1 1 1662.1 122.67 HUMAN 1 17.8865 11.2782 YSSSGYSSAEQINQD-p Q8IW50-6;S114-p YSSSGYSSAEQINQD 0.474773316010134 0.0173655699062675 -0.118666666666667 -0.506 5.9584171074189 24.2679576406882 -0.118666666666667 -0.506 0.253605278860851 0.0037428656286142 -1.27715238039003 -4.85490086960204 Q8IW50 FAM219A Q8IW50.6.S114.p_FAM219A Q8IW50-6_S114s _1_1_114_114 Q8IW50-6 Q8IW50|Q8IW50-6|Q5T586|Q8IW50-2 Isoform 6 of Protein FAM219A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.28434.28434.3 15.56 14.48 1.13 7 1 1 0 999.5056 2916.5355 S114s TMT10 107 (R) YSSSGYSsAEQINQDLNIQLLK (D) Y(0.0)S(0.0)S(0.0)S(0.0)GY(0.0)S(0.0)S(0.99)AEQINQDLNIQLLK K:TMT10,s:Phosphorylated S FAM219A 18841.5 1 5 1822.1 112.63 HUMAN 1 -5.9584 -24.268 YSSTRGISQLWKRNG-p A8CG34;S401-p YSSTRGISQLWKRNG 0.239026596554479 0.023571183995088 0.288 -0.374 11.8829596662637 22.1976174354382 0.288 -0.374 0.0648192547330867 0.00602890244428861 2.31159196598193 -4.3625994156832 A8CG34 NotFound A8CG34.S401.p_NotFound A8CG34_S401s _1_1_401_401 A8CG34 A8CG34|A0A075B7F8|Q96HA1-3|A8CG34-2|A0A087WY75|Q96HA1-2 Nuclear envelope pore membrane protein POM 121C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26396.26396.2 9.88 4.15 99 1 1 1 0 685.3852 1289.7982 S401s TMT10 399 (R) GIsQLWK (R) GIS(1.0)QLWK K:TMT10,s:Phosphorylated S POM121C 125455.9 1 20 133.2 532.02 HUMAN 1 11.883 -22.1976 YSTKDSYSSRDYPSS-p P38159;S221-p YSTKDSYSSRDYPSS 0.291571890121499 0.0737678545621929 -0.318333333333333 0.383 10.0965534199298 15.0282313200239 -0.318333333333333 0.383 0.0978013068520891 0.0314178793786459 -1.9984901985233 2.88186278006887 P38159 RBMX P38159.S221.p_RBMX P38159_S221s _1_1_221_221 P38159 P38159|Q96E39|P38159-2|H3BT71|H3BUY5 RNA-binding motif protein, X chromosome HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.5267.5267.3 12.05 12.05 1.216 7 1 1 0 576.9186 1648.7764 S221s TMT10 218 (K) DSYsSRDYPSSR (D) DS(0.0)Y(0.0)S(0.99)S(0.0)RDY(0.0)PS(0.0)S(0.0)R s:Phosphorylated S RBMX 42331.1 3 18 102.1 595.29 HUMAN 1 -10.0966 15.0282 YSVGASGSSSRKRHR-p Q8N684-3;S458-p YSVGASGSSSRKRHR 0.271908041557881 0.144469629225171 -0.167666666666667 -0.154 10.7158038451378 11.0671522553543 -0.167666666666667 -0.154 0.0848046401165047 0.0782140499642202 -2.10639180889053 -2.16689422995003 Q8N684 CPSF7 Q8N684.3.S458.p_CPSF7 Q8N684-3_S458s _1_1_458_458 Q8N684-3 Q8N684-3|Q8N684-2 Isoform 3 of Cleavage and polyadenylation specificity factor subunit 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.5977.5977.2 13.21 13.21 1.141 7 1 1 0 727.3309 1373.6858 S458s TMT10 450 (K) SYSVGASGsSSR (K) S(0.0)Y(0.0)S(0.0)VGAS(0.0)GS(0.99)S(0.0)S(0.0)R s:Phosphorylated S CPSF7 56545.1 2 8 1653.1 123.34 HUMAN 1 -10.7158 -11.0672 YSYFQGDSTSKQTRS-p P56645-2;S732-p YSYFQGDSTSKQTRS 0.932728337316214 0.410617331567664 -0.0176666666666667 -0.144333333333333 0.596830050223533 5.14249790081732 -0.0176666666666667 -0.144333333333333 0.871599545235944 0.306020281223621 -0.169447045547521 -1.12987468753394 P56645 PER3 P56645.2.S732.p_PER3 P56645-2_S732s _1_1_732_732 P56645-2 P56645-2|A0A087WV69 Isoform 2 of Period circadian protein homolog 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.15969.15969.3 10.84 10.84 1.124 6 1 1 0 607.6237 1740.8845 S732s TMT10 725 (K) YSYFQGDsTSK (Q) Y(0.0)S(0.0)Y(0.0)FQGDS(0.99)T(0.0)S(0.0)K K:TMT10,s:Phosphorylated S PER3 134140.8 1 2 4866.1 25.66 HUMAN 1 -0.5968 -5.1425 YSYQMALTPVVVTLW-p P11802;T172-p YSYQMALTPVVVTLW 0.172012241579796 0.720070587859481 -0.239666666666667 -0.0646666666666666 15.2204061264195 1.96533388433446 -0.239666666666667 -0.0646666666666667 0.0300579520536014 0.636013906393509 -2.9198916577336 -0.501053415260737 P11802 CDK4 P11802.T172.p_CDK4 P11802_T172t_1_1_172_172 P11802 P11802|P11802-2 Cyclin-dependent kinase 4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_25.36381.36381.3 18.28 18.28 6.04 6 1 1 0 843.4344 2432.3249 M169m T172t TMT10 164 (R) IYSYQmALtPVVVTLWYR (A) IY(0.0)S(0.0)Y(0.0)QM(1.0)ALT(0.99)PVVVT(0.0)LWY(0.0)R m:Oxidized methionine,t:Phosphorylated T CDK4 33957.4 2 1 5548.1 18.28 HUMAN 1 -15.2204 -1.9653 YTATEGQYQQQP___-p P07948-2;Y487-p YTATEGQYQQQP___ 0.793371658372264 0.272058330018488 -0.0976666666666667 -0.119666666666667 1.939818704966 7.44621920402062 -0.0976666666666667 -0.119666666666667 0.639761541594379 0.180043762285322 -0.495432826333296 -1.53846478471457 P07948 LYN P07948.2.Y487.p_LYN P07948-2_Y487y _1_1_487_487 P07948-2 P07948|P07948-2 Isoform 2 of Tyrosine-protein kinase Lyn HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.37543.37543.4 18.66 18.66 2.28 7 1 1 0 937.9284 3668.723 Y487y TMT10 463 (K) AEERPTFDYLQSVLDDFYTATEGQyQQQP (-) AEERPT(0.0)FDY(0.0)LQS(0.0)VLDDFY(0.0)T(0.0)AT(0.0)EGQY(0.99)QQQP y:Phosphorylated Y LYN 56488.7 1 3 2975.1 64.28 HUMAN 1 -1.9398 -7.4462 YTAVQRNSSEREGHS-p Q99700;S478-p YTAVQRNSSEREGHS 0.10503732738293 0.000952253650599092 0.975333333333333 1.657 20.6076404346915 53.8893090829167 0.975333333333334 1.657 0.00869432672444512 4.08384350842531e-06 4.01058716309779 18.5598028345275 Q99700 ATXN2 Q99700.S478.p_ATXN2 Q99700_S478s _1_1_478_478 Q99700 Q99700|Q99700-4|V9GY86|F8VQP2|F8WB06|Q99700-5|Q99700-2 Ataxin-2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.4222.4222.3 12.03 12.03 1.112 4 1 1 0 540.5961 1539.8077 S478s TMT10 471 (K) YTAVQRNsSER (E) Y(0.0)T(0.0)AVQRNS(0.99)S(0.0)ER s:Phosphorylated S ATXN2 140907.9 2 4 176.1 481.52 HUMAN 1 20.6076 53.8893 YTDGEESSDDGKKYH-p Q9P2B7;S139-p YTDGEESSDDGKKYH 0.176433174076321 0.0907665466939175 -0.239666666666667 0.197 14.9562554388712 13.7850536565771 -0.239666666666667 0.197 0.0319429084016305 0.0418306520491258 -2.87025086258184 2.65197679906289 Q9P2B7 CFAP97 Q9P2B7.S139.p_CFAP97 Q9P2B7_S138sS139s_2_2_138_139 Q9P2B7 Q9P2B7|Q9P2B7-2 Cilia- and flagella-associated protein 97 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17095.17095.3 15.59 15.59 6.184 5 2 2 0 1066.8044 3038.4569 S138s S139s TMT10 123 (K) IVKEGEDDYYTDGEEssDDGK (K) IVKEGEDDY(0.0)Y(0.0)T(0.0)DGEES(0.99)S(0.99)DDGK K:TMT10,s:Phosphorylated S CFAP97 59816.4 3 4 2623.1 76.55 HUMAN 1 -14.9563 13.7851 YTEKLKFSDEEDGRD-p P48634;S342-p YTEKLKFSDEEDGRD 0.529869436073776 0.0178038368389318 -0.186 0.344333333333333 5.10368943966467 24.0964937146096 -0.186 0.344333333333333 0.308767126447119 0.00389359368215849 -1.12302622849274 4.81280029043498 P48634 PRRC2A P48634.S342.p_PRRC2A P48634_S342sS350s_2_2_342_350 P48634 P48634|P48634-3|P48634-2 Protein PRRC2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.10725.10725.5 8.8 8.8 8.796 5 2 2 0 994.0446 4806.2566 S342s S350s TMT10 339 (K) LKFsDEEDGRDsDEEGAEGHRDSQSASGEERPPEADGK (K) LKFS(0.99)DEEDGRDS(0.99)DEEGAEGHRDS(0.0)QS(0.0)AS(0.0)GEERPPEADGK K:TMT10,s:Phosphorylated S PRRC2A 229315.4 1 35 36.1 882.05 HUMAN 1 -5.1037 24.0965 YTFERESSGEEEE__-p P54368;S223-p YTFERESSGEEEE__ 0.0856196657739645 0.0173454724453883 0.354 0.344333333333333 22.8445886315808 24.2898403615526 0.354 0.344333333333333 0.00519446873745174 0.00372405394921795 4.51778402247138 4.86029183005579 P54368 OAZ1 P54368.S223.p_OAZ1 P54368_S222sS223s_2_2_222_223 P54368 P54368|J3QQY4 Ornithine decarboxylase antizyme 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.22514.22514.3 7.37 7.37 1.347 4 2 2 0 977.057 2769.197 S222s S223s TMT10 208 (K) RPDACFMAYTFEREssGEEEE (-) RPDACFMAY(0.0)T(0.0)FERES(0.99)S(0.99)GEEEE C:Carbamidomethylation,s:Phosphorylated S OAZ1 25747.4 1 3 5171.1 22.16 HUMAN 1 22.8446 24.2898 YTIKSHSSLPPNNSY-p O43293;S312-p YTIKSHSSLPPNNSY 0.996001839833783 0.55231070916662 0.001 -0.0583333333333333 0.0329679649483548 3.47270920406889 0.000999999999999997 -0.0583333333333333 0.992437585580051 0.449499361940254 0.00992392533922749 -0.814767821614912 O43293 DAPK3 O43293.S312.p_DAPK3 O43293_S312s _1_1_312_312 O43293 O43293 Death-associated protein kinase 3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_12.11561.11850.3 16.82 16.82 1.129 5 1 1 0 710.6545 2049.9827 S312s TMT10 309 (K) SHSsLPPNNSYADFER (F) S(0.0)HS(0.0)S(0.99)LPPNNS(0.0)Y(0.0)ADFER s:Phosphorylated S DAPK3 52705.9 3 1 5723.1 16.82 HUMAN 1 0.033 -3.4727 YTLIRKDSEEEVSLL-p Q9Y487;S695-p YTLIRKDSEEEVSLL 0.490241462973725 0.377364764616572 0.153666666666667 0.163666666666667 5.70596289526654 5.62129146416098 0.153666666666667 0.163666666666667 0.268784184260228 0.274075902954281 1.2320009997286 1.21652079307841 Q9Y487 ATP6V0A2 Q9Y487.S695.p_ATP6V0A2 Q9Y487_S695s _1_1_695_695 Q9Y487 Q9Y487 V-type proton ATPase 116 kDa subunit a isoform 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.19168.19168.5 29.86 29.86 2.845 6 1 1 0 878.421 4308.109 S695s TMT10 686 (R) SGYTLIRKDsEEEVSLLGSQDIEEGNHQVEDGCR (E) S(0.0)GY(0.0)T(0.0)LIRKDS(0.99)EEEVS(0.0)LLGS(0.0)QDIEEGNHQVEDGCR K:TMT10,C:Carbamidomethylation,s:Phosphorylated S ATP6V0A2 99164.6 3 3 2621.1 76.56 HUMAN 1 5.706 5.6213 YTLPRQATPGVPAQQ-p O60341;T841-p YTLPRQATPGVPAQQ 0.0869754461573755 0.00949153116870816 0.474 -0.425666666666667 22.6044759894063 28.5478203551175 0.474 -0.425666666666667 0.00548974789755407 0.00139706934878832 4.4615433984632 -5.99327735102873 O60341 KDM1A O60341.T841.p_KDM1A O60341_T841t _1_1_841_841 O60341 O60341-2 Lysine-specific histone demethylase 1A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.13336.13336.2 11.77 11.77 1.813 3 1 1 0 854.4058 1627.8311 T841t TMT10 839 (R) QAtPGVPAQQSPSM (-) QAT(0.99)PGVPAQQS(0.0)PS(0.0)M t:Phosphorylated T KDM1A 93414.4 1 9 232.1 420.78 HUMAN 1 22.6045 -28.5478 YTMERCHSAEMLSVS-p O00444;S401-p YTMERCHSAEMLSVS 0.248295328267954 0.0511642402924895 0.606666666666667 -0.803333333333333 11.559389205968 17.2356067748653 0.606666666666667 -0.803333333333333 0.0698330610753621 0.0188990216491578 2.25441732592614 -3.3066211895929 O00444 PLK4 O00444.S401.p_PLK4 O00444_S401s _1_1_401_401 O00444 O00444|O00444-2|O00444-3 Serine/threonine-protein kinase PLK4 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.11973.11973.3 14.77 13.24 9.701 3 1 1 0 596.2925 1706.897 S401s TMT10 399 (R) CHsAEMLSVSK (R) CHS(0.99)AEMLS(0.0)VS(0.0)K C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PLK4 109711.7 3 2 2619.1 76.59 HUMAN 1 11.5594 -17.2356 YTNELKASGGEIKIH-p Q9UHB6-4;S294-p YTNELKASGGEIKIH 0.958185700416475 0.21958835843106 -0.00866666666666667 -0.200333333333333 0.360291643556356 8.66669410930895 -0.00866666666666667 -0.200333333333333 0.920387762500579 0.135934780126598 -0.104696714482241 -1.75006257472029 Q9UHB6 LIMA1 Q9UHB6.4.S294.p_LIMA1 Q9UHB6-4_S294s _1_1_294_294 Q9UHB6-4 Q9UHB6-4|Q9UHB6-5|Q9UHB6-2|F8VQE1|F8VRN8 Isoform 4 of LIM domain and actin-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_16.14021.14021.4 20.58 20.58 2.825 7 1 1 0 696.112 2701.4612 S294s TMT10 281 (K) QSSSTNYTNELKAsGGEIK (I) QS(0.0)S(0.0)S(0.0)T(0.0)NY(0.0)T(0.0)NELKAS(0.99)GGEIK K:TMT10,s:Phosphorylated S LIMA1 85678.4 2 14 42.1 822.82 HUMAN 1 -0.3603 -8.6667 YTNKNYKSPPANRCL-p Q5THK1;S2055-p YTNKNYKSPPANRCL 0.326635031191995 0.00154530832245291 -0.143 -0.889666666666667 9.09598957217477 45.2426760097148 -0.143 -0.889666666666667 0.123140536892455 2.99042144883518e-05 -1.8249805514503 -12.7608836411855 Q5THK1 PRR14L Q5THK1.S2055.p_PRR14L Q5THK1_S2055s _1_1_2055_2055 Q5THK1 Q5THK1|Q5THK1-4 Protein PRR14L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.5207.5207.3 7.66 2.95 4.001 2 1 1 0 528.9482 1504.8636 S2055s TMT10 2052 (K) NYKsPPANR (C) NY(0.0)KS(0.99)PPANR K:TMT10,s:Phosphorylated S PRR14L 241289.3 2 9 1413.1 145.23 HUMAN 1 -9.096 -45.2427 YTNKNYQSPTTRRTF-p Q9BWN1;S488-p YTNKNYQSPTTRRTF 0.134824882249992 0.00176923659520671 -0.295 -1.24766666666667 17.8459714322325 43.4976109252509 -0.295 -1.24766666666667 0.0164211231002715 4.46929382533801e-05 -3.43115973488282 -11.8222018745103 Q9BWN1 PRR14 Q9BWN1.S488.p_PRR14 Q9BWN1_S488s _1_1_488_488 Q9BWN1 Q9BWN1 Proline-rich protein 14 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.3620.3620.3 7.49 4.45 2.985 4 1 1 0 477.9031 1351.728 S488s TMT10 485 (K) NYQsPTTRR (T) NY(0.0)QS(0.99)PT(0.0)T(0.0)RR s:Phosphorylated S PRR14 64726.7 1 10 874.1 209.43 HUMAN 1 -17.846 -43.4976 YTPPPILSPVREGSG-p A0A1C7CYX1;S661-p YTPPPILSPVREGSG 0.337276225435397 0.239294569351523 0.140333333333333 0.123333333333333 8.79583939574717 8.1821986239536 0.140333333333333 0.123333333333333 0.131952025280609 0.151977794451438 1.77302239553381 1.66621238221415 A0A1C7CYX1 NotFound A0A1C7CYX1.S661.p_NotFound A0A1C7CYX1_T655tS661s_2_2_655_661 A0A1C7CYX1 A0A1C7CYX1|Q6PJG2 ELM2 and SANT domain-containing protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_19.34057.34275.3 12.7 12.7 1.653 4 2 2 0 767.053 2139.2051 T655t S661s TMT10 648 (R) SFELPPYtPPPILsPVR (E) S(0.0)FELPPY(0.0)T(0.99)PPPILS(0.99)PVR t:Phosphorylated T,s:Phosphorylated S ELMSAN1 121244.8 5 13 548.1 275.48 HUMAN 1 8.7958 8.1822 YTPPPMLSPVRQGSG-p Q96PN7;S715-p YTPPPMLSPVRQGSG 0.160555264340118 0.346452383126745 0.234333333333333 0.123333333333333 15.901560854918 6.10158106089304 0.234333333333333 0.123333333333333 0.0256947214818615 0.245381543486374 3.04931167068201 1.30232451108134 Q96PN7 TRERF1 Q96PN7.S715.p_TRERF1 Q96PN7_S715s _1_1_715_715 Q96PN7 Q05GC8|Q96PN7|Q96PN7-5|Q96PN7-4|Q96PN7-3|Q96PN7-2 Transcriptional-regulating factor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_15.31580.31580.3 11.74 11.74 1.221 4 1 1 0 1105.251 3233.7594 S715s TMT10 692 (R) VLGDHLLLDPTHELPPYTPPPMLsPVR (Q) VLGDHLLLDPT(0.0)HELPPY(0.0)T(0.0)PPPMLS(0.99)PVR s:Phosphorylated S TRERF1 132995.3 2 7 1115.1 175.65 HUMAN 1 15.9016 6.1016 YTPQNLDSESESGSS-p Q15648;S1463-p YTPQNLDSESESGSS 0.133441087976541 0.659300010506872 -0.296333333333333 -0.044 18.0111287396408 2.47490343040911 -0.296333333333333 -0.044 0.0158083712329066 0.565600333621401 -3.46451787913121 -0.611503533993334 Q15648 MED1 Q15648.S1463.p_MED1 Q15648_S1463s_1_1_1463_1463 Q15648 Q15648 Mediator of RNA polymerase II transcription subunit 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.16807.16807.2 14.72 14.72 1.184 8 1 1 0 1418.668 2755.3674 N1460n S1463s TMT10 1453 (K) SPAYTPQnLDsESESGSSIAEK (S) S(0.0)PAY(0.0)T(0.0)PQN(1.0)LDS(0.99)ES(0.0)ES(0.0)GS(0.0)S(0.0)IAEK K:TMT10,n:Deamidated,s:Phosphorylated S MED1 169445 2 26 115.1 566.87 HUMAN 1 -18.0111 -2.4749 YTPTTVDSPLQKRSF-p Q9P2D1;S2356-p YTPTTVDSPLQKRSF 0.242519541519085 0.026369271971688 -0.178 -0.289333333333333 11.7696949583128 21.439438493895 -0.178 -0.289333333333333 0.0665319885594263 0.00717887102013803 -2.29155029195864 -4.19062022877062 Q9P2D1 CHD7 Q9P2D1.S2356.p_CHD7 Q9P2D1_S2356s _1_1_2356_2356 Q9P2D1 Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.35907.35907.4 22.98 20.3 1.69 5 1 1 0 781.1471 3041.6058 S2356s TMT10 2338 (R) QMFDFQGLIPGYTPTTVDsPLQK (R) QMFDFQGLIPGY(0.0)T(0.0)PT(0.0)T(0.0)VDS(0.99)PLQK K:TMT10,s:Phosphorylated S CHD7 337747 12 9 256.1 399.25 HUMAN 1 -11.7697 -21.4394 YTQSGENSLVQEGSE-p Q9Y4W2;S514-p YTQSGENSLVQEGSE 0.544331033416507 0.524715537196005 -0.122 -0.0693333333333333 4.87863119909069 3.76290805782829 -0.122 -0.0693333333333333 0.325189773916478 0.420445002004739 -1.08176898972954 -0.871387731104335 Q9Y4W2 LAS1L Q9Y4W2.S514.p_LAS1L Q9Y4W2_S514s _1_1_514_514 Q9Y4W2 Q9Y4W2|Q9Y4W2-2|Q9Y4W2-3 Ribosomal biogenesis protein LAS1L HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.24553.24553.3 18.19 18.19 2.291 7 1 1 0 1064.8634 3112.5873 S514s TMT10 503 (R) ICSIYTQSGENsLVQEGSEASPIGK (S) ICS(0.0)IY(0.0)T(0.0)QS(0.0)GENS(0.99)LVQEGS(0.0)EAS(0.0)PIGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S LAS1L 84033.3 5 3 1725.1 119.4 HUMAN 1 -4.8786 -3.7629 YTRAQANSPRPAMNS-p Q15652;S284-p YTRAQANSPRPAMNS 0.222927229268876 0.0708403679236334 0.258 0.219666666666667 12.5396461850114 15.2850494821219 0.258 0.219666666666667 0.0557231144097711 0.0296138622411626 2.42843501435339 2.93012861338522 Q15652 JMJD1C Q15652.S284.p_JMJD1C Q15652_S284s _1_1_284_284 Q15652 Q15652|Q15652-3|A0A1W2PNZ9|Q15652-2 Probable JmjC domain-containing histone demethylation protein 2C HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_20.10061.10061.3 11.85 11.85 3.082 2 1 1 0 792.7459 2296.2596 S284s TMT10 280 (R) AQANsPRPAMNSQAAVPK (Q) AQANS(0.99)PRPAMNS(0.0)QAAVPK K:TMT10,s:Phosphorylated S JMJD1C 286573.8 2 2 377.1 336.35 HUMAN 1 12.5396 15.285 YTRRRNPSCGSDNDS-p Q9HCS5;S445-p YTRRRNPSCGSDNDS 0.21511781851997 0.0660149275798732 0.299666666666667 0.504 12.8573510089478 15.7000043818048 0.299666666666667 0.504 0.0517922643956619 0.0269153208831003 2.48539383395245 3.00872087215629 Q9HCS5 EPB41L4A Q9HCS5.S445.p_EPB41L4A Q9HCS5_S445s _1_1_445_445 Q9HCS5 Q9HCS5 Band 4.1-like protein 4A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_2.3864.3864.3 10.32 10.32 3.826 3 1 1 0 623.2634 1787.8089 S445s Hydrogen 443 (R) NPsCGSDNDSVQPVRR (R) NPS(0.99)CGS(0.0)DNDS(0.0)VQPVRR C:Carbamidomethylation,s:Phosphorylated S EPB41L4A 79741.9 4 6 696.1 241.4 HUMAN 1 12.8574 15.7 YTTGRRESVNLGKSE-p P46013;S374-p YTTGRRESVNLGKSE 0.19068125544714 0.0039164475664211 -0.267 -0.711666666666667 14.0719475565514 35.5029964270963 -0.267 -0.711666666666667 0.039156624318893 0.000281643905063701 -2.70613776502163 -8.2812394983112 P46013 MKI67 P46013.S374.p_MKI67 P46013_S374s _1_1_374_374 P46013 P46013 Proliferation marker protein Ki-67 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_23.11951.11951.4 15.17 8.14 2.35 4 1 1 0 562.5532 2167.2235 S374s TMT10 365 (K) DLYTTGRREsVNLGK (S) DLY(0.0)T(0.0)T(0.0)GRRES(0.99)VNLGK K:TMT10,s:Phosphorylated S MKI67 360912.4 3 6 5.1 1918.46 HUMAN 1 -14.0719 -35.503 YTTSKDGTAGIPNLQ-p Q9BY44;T103-p YTTSKDGTAGIPNLQ 0.779740611930052 0.0398538451684825 -0.0443333333333333 -0.291 2.07669987355332 18.7701265127913 -0.0443333333333333 -0.291 0.619911956205708 0.0132735579043391 -0.525721565100903 -3.61671403320647 Q9BY44 EIF2A Q9BY44.T103.p_EIF2A Q9BY44_T103t _1_1_103_103 Q9BY44 Q9BY44|F8WAE5|Q9BY44-3 Eukaryotic translation initiation factor 2A HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.30769.30769.4 23.46 23.46 1.182 8 1 1 0 991.2787 3882.1256 T103t TMT10 87 (K) NTVLATWQPYTTSKDGtAGIPNLQLYDVK (T) NT(0.0)VLAT(0.0)WQPY(0.0)T(0.0)T(0.0)S(0.0)KDGT(0.99)AGIPNLQLY(0.0)DVK K:TMT10,t:Phosphorylated T EIF2A 65559.4 1 3 1639.1 124.84 HUMAN 1 -2.0767 -18.7701 YVAAAFPSACGKTNL-p Q16822;S304-p YVAAAFPSACGKTNL 0.224844731922765 0.00496222038350936 0.212 0.599666666666667 12.4457525073119 33.6057141573641 0.212 0.599666666666667 0.0569409553296417 0.000435941871471483 2.41165747802831 7.59476030107118 Q16822 PCK2 Q16822.S304.p_PCK2 Q16822_S304s _1_1_304_304 Q16822 Q16822|H0YM31|B4DW73|H0YML5|Q16822-2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.19337.19337.3 14.9 14.9 14.9 2 1 1 0 593.97 1699.9242 S304s TMT10 297 (R) YVAAAFPsACGK (T) Y(0.0)VAAAFPS(0.99)ACGK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S PCK2 71527.5 1 3 4117.1 37.25 HUMAN 1 12.4458 33.6057 YVAPFLESEDEEDEP-p Q8N3Y1;S249-p YVAPFLESEDEEDEP 0.952789431211013 0.846471021210305 0.00966666666666667 0.0253333333333334 0.414931303003298 1.01713850787628 0.00966666666666666 0.0253333333333334 0.908880675688263 0.791199764300781 0.119910098263368 0.278144474241705 Q8N3Y1 FBXW8 Q8N3Y1.S249.p_FBXW8 Q8N3Y1_S249s _1_1_249_249 Q8N3Y1 Q8N3Y1|Q8N3Y1-2 F-box/WD repeat-containing protein 8 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.34676.34676.4 22.31 19.94 8.231 4 1 1 0 899.6491 3515.615 S249s TMT10 239 (R) TWDYVAPFLEsEDEEDEPGMQPNVSFVR (I) T(0.0)WDY(0.0)VAPFLES(0.99)EDEEDEPGMQPNVS(0.0)FVR s:Phosphorylated S FBXW8 67906.1 2 3 3591.1 47.55 HUMAN 1 0.4149 1.0171 YVCRLYRSDSDSSTL-p Q9ULE0;S925-p YVCRLYRSDSDSSTL 0.949984753800772 0.40971270916343 0.013 0.175666666666667 0.441337476831147 5.15651636341547 0.013 0.175666666666667 0.903371223779242 0.305034079967656 0.127205450453019 1.13242970246968 Q9ULE0 WWC3 Q9ULE0.S925.p_WWC3 Q9ULE0_S925s _1_1_925_925 Q9ULE0 Q9ULE0 Protein WWC3 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.10072.10072.2 11.57 7.71 2.188 6 1 1 0 903.4366 1725.8969 S925s TMT10 922 (R) LYRsDSDSSTLPR (K) LY(0.0)RS(0.99)DS(0.0)DS(0.0)S(0.0)T(0.0)LPR s:Phosphorylated S WWC3 123814.7 9 25 161.1 495.35 HUMAN 1 0.4413 5.1565 YVCTDCGTNLKQKGH-p O00151;T291-p YVCTDCGTNLKQKGH 0.32494508530057 0.899801252921161 0.176333333333333 -0.0143333333333333 9.14544456219918 0.641443299147401 0.176333333333333 -0.0143333333333333 0.121746236187014 0.862691800108107 1.83354305405657 -0.181333514245048 O00151 PDLIM1 O00151.T291.p_PDLIM1 O00151_T291t _1_1_291_291 O00151 O00151 PDZ and LIM domain protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.6977.6977.4 12.97 11.42 1.962 3 1 1 0 672.0581 2605.2474 T291t TMT10 278 (R) HRHPECYVCTDCGtNLK (Q) HRHPECY(0.0)VCT(0.0)DCGT(0.99)NLK C:Carbamidomethylation,K:TMT10,t:Phosphorylated T PDLIM1 36527.5 1 7 1380.1 148.35 HUMAN 1 9.1454 -0.6414 YVDGFIGTWPKEKRS-p Q08AD1;T426-p YVDGFIGTWPKEKRS 0.317544106394653 0.28958699086013 0.143666666666667 0.161333333333333 9.33221935550445 7.10112359957859 0.143666666666667 0.161333333333333 0.116621349993309 0.19493402044041 1.86588834119242 1.47828866477037 Q08AD1 CAMSAP2 Q08AD1.T426.p_CAMSAP2 Q08AD1_T426t _1_1_426_426 Q08AD1 Q08AD1|Q08AD1-3|Q08AD1-2 Calmodulin-regulated spectrin-associated protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.30065.30065.3 23.98 19.22 9.71 6 1 1 0 767.3753 2220.1411 T426t TMT10 414 (R) SSSMSYVDGFIGtWPK (E) S(0.0)S(0.0)S(0.0)MS(0.0)Y(0.0)VDGFIGT(0.99)WPK K:TMT10,t:Phosphorylated T CAMSAP2 169284 3 2 28.2 931.95 HUMAN 1 9.3322 7.1011 YVDSWSGSEDEASNP-p Q96D09;S284-p YVDSWSGSEDEASNP 0.620926888590319 0.585477165463265 0.087 -0.054 3.84805924467571 3.14110852249105 0.087 -0.054 0.41228171650609 0.485164647663429 0.887972278729983 -0.748822185054868 Q96D09 GPRASP2 Q96D09.S284.p_GPRASP2 Q96D09_S284s_1_1_284_284 Q96D09 Q96D09 G-protein coupled receptor-associated sorting protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_11.31739.31739.4 14.28 14.28 0 8 1 1 0 1173.2883 4609.2061 S284s N302n TMT10 272 (R) SKQEAYVDSWSGsEDEASNPFSFWVGENTNnLFRPR (V) S(0.0)KQEAY(0.0)VDS(0.0)WS(0.0)GS(0.99)EDEAS(0.0)N(0.25)PFS(0.0)FWVGEN(0.25)T(0.0)N(0.25)N(0.25)LFRPR K:TMT10,s:Phosphorylated S,n:Deamidated GPRASP2 94342.1 3 2 1724.1 119.44 HUMAN 1 3.8481 -3.1411 YVGDEAQSKRGILTL-p P63261;S60-p YVGDEAQSKRGILTL 0.74688911992144 0.519179636804688 -0.08 0.09 2.40652952864514 3.82433606996333 -0.08 0.09 0.574575425220313 0.414539952213357 -0.59706074209819 0.883253932188425 P63261 ACTG1 P63261.S60.p_ACTG1 P63261_S60s _1_1_60_60 P63261 P68133|P62736|P68032|P63267|P60709|P63261 Actin, cytoplasmic 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.9879.9879.3 11.38 11.38 11.38 3 1 1 0 579.6093 1656.8481 S60s TMT10 51 (K) DSYVGDEAQsK (R) DS(0.0)Y(0.0)VGDEAQS(0.99)K K:TMT10,s:Phosphorylated S ACTG1 42134.4 1 11 1233.1 163.71 HUMAN 1 -2.4065 3.8243 YVGVSSDSVGGFRYS-p Q14677-3;S166-p YVGVSSDSVGGFRYS 0.691992312130027 0.315196826056262 0.0556666666666667 -0.0986666666666666 2.99851485831617 6.62726527292241 0.0556666666666667 -0.0986666666666667 0.501358652184553 0.217406974699592 0.720110633556914 -1.39523177608118 Q14677 CLINT1 Q14677.3.S166.p_CLINT1 Q14677-3_S166s _1_1_166_166 Q14677-3 Q14677-3|Q14677-2 Isoform 3 of Clathrin interactor 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_14.17038.17038.2 15.62 15.62 1.279 4 1 1 0 819.8907 1558.8063 S166s TMT10 159 (K) YVGVSSDsVGGFR (Y) Y(0.0)VGVS(0.0)S(0.0)DS(0.99)VGGFR s:Phosphorylated S CLINT1 70350.7 4 11 632.1 256.73 HUMAN 1 2.9985 -6.6273 YVKENARSPSSVTGN-p Q9NYB0;S154-p YVKENARSPSSVTGN 0.0973600331101722 0.0149918966091793 -0.610666666666667 0.402666666666667 21.432478170693 25.2454360553598 -0.610666666666667 0.402666666666667 0.00719038563213877 0.00298852156802067 -4.19334405784382 5.09976122495497 Q9NYB0 TERF2IP Q9NYB0.S154.p_TERF2IP Q9NYB0_S154s _1_1_154_154 Q9NYB0 Q9NYB0 Telomeric repeat-binding factor 2-interacting protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_1.16053.16053.3 16.68 12.2 2.741 4 1 1 0 752.3904 2175.1922 S154s TMT10 150 (K) ENARsPSSVTGNALWK (A) ENARS(0.99)PS(0.0)S(0.0)VT(0.0)GNALWK K:TMT10,s:Phosphorylated S TERF2IP 44430.3 11 4 1047.1 184.33 HUMAN 1 -21.4325 25.2454 YVLKRQFSALVPAFD-p A0A087X2H1;S1776-p YVLKRQFSALVPAFD 0.908443303300714 0.125163643495451 -0.026 -0.168 0.820173069834213 11.901160957572 -0.026 -0.168 0.827909170210488 0.0645481655581016 -0.228141842770569 -2.31367224193425 A0A087X2H1 NotFound A0A087X2H1.S1776.p_NotFound A0A087X2H1_S1776s _1_1_1776_1776 A0A087X2H1 A0A087X2H1|Q9ULT8 E3 ubiquitin-protein ligase HECTD1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25303.25303.3 14.13 9.59 99 1 1 1 0 656.3414 1887.0438 S1776s TMT10 1774 (R) QFsALVPAFDPRPGR (T) QFS(1.0)ALVPAFDPRPGR s:Phosphorylated S HECTD1 292594.4 10 16 365.1 342.23 HUMAN 1 -0.8202 -11.9012 YVLPEHMSM______-p P53396;S1100-p YVLPEHMSM______ 0.612310168463098 0.0708793418673266 0.0686666666666667 -0.208333333333333 3.95004493697879 15.281796187929 0.0686666666666667 -0.208333333333333 0.402712867384833 0.0296360542569824 0.907568549528709 -2.92951543030034 P53396 ACLY P53396.S1100.p_ACLY P53396_S1100s _1_1_1100_1100 P53396 P53396|P53396-2|P53396-3 ATP-citrate synthase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.29437.29437.3 19.3 19.3 4.831 3 1 1 0 756.0004 2186.0248 S1100s TMT10 1086 (R) HPWDDISYVLPEHMsM (-) HPWDDIS(0.0)Y(0.0)VLPEHMS(0.99)M s:Phosphorylated S ACLY 121749.9 2 8 1256.1 161.58 HUMAN 1 3.95 -15.2818 YVMRRSISSPKYDYL-p A0A1B0GUN5;S505-p YVMRRSISSPKYDYL 0.523729620660367 0.724065915196701 0.094 0.0366666666666667 5.19606317191842 1.92985969883997 0.094 0.0366666666666667 0.302269051205031 0.641230291538799 1.13986933646219 0.493155797303038 A0A1B0GUN5 NotFound A0A1B0GUN5.S505.p_NotFound A0A1B0GUN5_S505s _1_1_505_505 A0A1B0GUN5 A0A1B0GUN5 Pleckstrin homology domain-containing family A member 6 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_21.16061.16061.3 10.5 6.42 1.106 5 1 1 0 680.346 1959.0588 S505s TMT10 503 (R) SIsSPKYDYLGDR (R) S(0.0)IS(0.99)S(0.0)PKY(0.0)DY(0.0)LGDR K:TMT10,s:Phosphorylated S PLEKHA6 131629.9 3 1 52.2 743.36 HUMAN 1 5.1961 1.9299 YVPDVEMSDSESEAS-p Q6IE81;S810-p YVPDVEMSDSESEAS 0.889319369501203 0.646809183668774 -0.021 0.0846666666666667 0.994755397461724 2.57941047009738 -0.021 0.0846666666666667 0.795288056339479 0.55215238572002 -0.272562356236703 0.633527960145598 Q6IE81 JADE1 Q6IE81.S810.p_JADE1 Q6IE81_S810sS812s_2_2_810_812 Q6IE81 Q6IE81 Protein Jade-1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.20088.20088.4 18.89 18.89 1.157 6 2 2 0 931.1639 3561.6993 S810s S812s TMT10 794 (K) LKSDNENDGYVPDVEMsDsESEASEK (K) LKS(0.0)DNENDGY(0.0)VPDVEMS(0.99)DS(0.99)ES(0.0)EAS(0.0)EK K:TMT10,s:Phosphorylated S JADE1 97129.2 2 6 1555.1 131.82 HUMAN 1 -0.9948 2.5794 YVPMNPNSPPRQHSS-p Q13480-2;S454-p YVPMNPNSPPRQHSS 0.109500745299266 0.112380248467204 0.351 0.303666666666667 20.1095906683293 12.522812231202 0.351 0.303666666666667 0.00975081536869292 0.0559395253295989 3.90250927452391 2.42415310619326 Q13480 GAB1 Q13480.2.S454.p_GAB1 Q13480-2_S454s _1_1_454_454 Q13480-2 Q13480-2|B7Z3B9 Isoform 2 of GRB2-associated-binding protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_7.25887.25887.3 24.61 24.61 4.94 6 1 1 0 1085.1816 3173.5622 S454s TMT10 431 (K) NVLTVGSVSSEELDENYVPMNPNsPPR (Q) NVLT(0.0)VGS(0.0)VS(0.0)S(0.0)EELDENY(0.0)VPMNPNS(0.99)PPR s:Phosphorylated S GAB1 80631.3 1 13 368.1 340.82 HUMAN 1 20.1096 12.5228 YVPVAPPTPAWQPEI-p Q6PKG0;T303-p YVPVAPPTPAWQPEI 0.158821380492927 0.0960807616538465 -0.245333333333333 -0.242666666666667 16.0060504265135 13.4536878652111 -0.245333333333333 -0.242666666666667 0.0250838940283824 0.0451472408186437 -3.06935211522626 -2.59166778656596 Q6PKG0 LARP1 Q6PKG0.T303.p_LARP1 Q6PKG0_T303t _1_1_303_303 Q6PKG0 Q6PKG0|Q6PKG0-3 La-related protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_17.24102.24102.5 26.31 26.83 11.123 8 1 1 0 960.6797 4719.4186 T303t TMT10 290 (K) GSESATYVPVAPPtPAWQPEIKPEPAWHDQDETSSVK (S) GS(0.0)ES(0.0)AT(0.0)Y(0.0)VPVAPPT(0.99)PAWQPEIKPEPAWHDQDET(0.0)S(0.0)S(0.0)VK K:TMT10,t:Phosphorylated T LARP1 123907.4 3 41 28.1 931.95 HUMAN 1 -16.0061 -13.4537 YVPYNILTPYPGPRL-p Q8TE68;T533-p YVPYNILTPYPGPRL 0.1560557092084 0.197713261865413 0.314 -0.158666666666667 16.192080181699 9.26204428901808 0.314 -0.158666666666667 0.0240321143518813 0.118521072044608 3.10515908612125 -1.8530459988994 Q8TE68 EPS8L1 Q8TE68.T533.p_EPS8L1 Q8TE68_T533t _1_1_533_533 Q8TE68 Q8TE68|B4DKV7|Q8TE68-2|Q8TE68-4|K7ELW3 Epidermal growth factor receptor kinase substrate 8-like protein 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.23070.23070.3 16.84 16.84 3.62 4 1 1 0 956.8146 2788.462 T533t TMT10 517 (K) VRDPAGQEGYVPYNILtPYPGPR (L) VRDPAGQEGY(0.0)VPY(0.0)NILT(0.99)PY(0.0)PGPR t:Phosphorylated T EPS8L1 80534.9 1 9 326.1 361.27 HUMAN 1 16.1921 -9.262 YVRKRRPSRPHMFPK-p A8MUP8;S385-p YVRKRRPSRPHMFPK 0.531734774301321 0.00847965722527311 -0.148666666666667 0.805 5.07608857759837 29.4082513472751 -0.148666666666667 0.805 0.310735693288029 0.00114597426612986 -1.11798363592055 6.24444199877185 A8MUP8 RARA A8MUP8.S385.p_RARA A8MUP8_S385s _1_1_385_385 A8MUP8 A8MUP8|P10276|P10276-2|P10276-3 Retinoic acid receptor alpha HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_22.6430.6430.5 8.01 8.01 99 1 1 1 0 390.2193 1867.1001 S385s TMT10 382 (K) RRPsRPHMFPK (M) RRPS(1.0)RPHMFPK K:TMT10,s:Phosphorylated S RARA 53989.8 1 1 4310.1 33.86 HUMAN 1 -5.0761 29.4083 YVTEEGDSPLGDHVG-p P16333;S166-p YVTEEGDSPLGDHVG 0.0530370391826656 0.0181282513814046 -0.498333333333333 0.4 27.7368610598684 23.9826782860506 -0.498333333333333 0.4 0.00168389068310477 0.00399698180609603 -5.77203738950979 4.78499155556745 P16333 NCK1 P16333.S166.p_NCK1 P16333_S166s _1_1_166_166 P16333 P16333|P16333-2 Cytoplasmic protein NCK1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.25891.25891.4 21.32 21.32 1.172 8 1 1 0 956.1886 3741.7506 S166s Hydrogen 146 (R) GSYNGQVGWFPSNYVTEEGDsPLGDHVGSLSEK (L) GS(0.0)Y(0.0)NGQVGWFPS(0.0)NY(0.0)VT(0.0)EEGDS(0.99)PLGDHVGS(0.0)LS(0.0)EK K:TMT10-Lys-Only,s:Phosphorylated S NCK1 43091.9 4 3 2057.1 100.15 HUMAN 1 -27.7369 23.9827 YVYPSLESDEDNPIF-p O75151;S882-p YVYPSLESDEDNPIF 0.260885776154092 0.00778126970624509 -0.38 0.68 11.0537320795343 30.0967828582052 -0.38 0.68 0.0784561137662678 0.00097796140134255 -2.16552542727647 6.45135482636563 O75151 PHF2 O75151.S882.p_PHF2 O75151_S882s _1_1_882_882 O75151 O75151|A0A087WW48|E7ET14 Lysine-specific demethylase PHF2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.28001.28001.4 14.27 14.27 1.125 5 1 1 0 693.5738 2691.3078 S882s TMT10 872 (K) DSDYVYPSLEsDEDNPIFK (S) DS(0.0)DY(0.0)VY(0.0)PS(0.0)LES(0.99)DEDNPIFK K:TMT10,s:Phosphorylated S PHF2 121742.7 3 9 376.2 336.84 HUMAN 1 -11.0537 30.0968 YVYVRRYSVDQENNM-p Q9NQZ5;S235-p YVYVRRYSVDQENNM 0.409861451732804 0.0154604915090575 0.201 -0.454 7.14076284037583 25.0389427125784 0.201 -0.454 0.193162899564154 0.00313404861378415 1.48563120928851 -5.0473340313002 Q9NQZ5 STARD7 Q9NQZ5.S235.p_STARD7 Q9NQZ5_S235s _1_1_235_235 Q9NQZ5 Q9NQZ5 StAR-related lipid transfer protein 7, mitochondrial HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.19208.19208.3 7.52 7.52 7.523 3 1 1 0 750.6911 2170.0946 S235s TMT10 233 (R) RYsVDQENNMMVLVSR (A) RY(0.0)S(0.99)VDQENNMMVLVS(0.0)R s:Phosphorylated S STARD7 43283.6 1 1 7139.1 7.52 HUMAN 1 7.1408 -25.0389 YWFGRDKSCEYCFDE-p O96017-9;S163-p YWFGRDKSCEYCFDE 0.416202077766395 0.00464985793747891 -0.150666666666667 0.680666666666667 7.02642256686895 34.1218745841377 -0.150666666666667 0.680666666666667 0.198315995027588 0.000387090525508949 -1.46563755483366 7.77647399668037 O96017 CHEK2 O96017.9.S163.p_CHEK2 O96017-9_S163s _1_1_163_163 O96017-9 O96017-9|O96017-12|O96017-7|O96017-8|O96017-2|C9JFD7|O96017-5|O96017-6|F8WCV2 Isoform 9 of Serine/threonine-protein kinase Chk2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_10.21984.21984.3 18.63 14.59 3.273 2 1 1 0 781.3679 2262.1187 S163s Hydrogen 161 (R) DKsCEYCFDEPLLK (R) DKS(0.99)CEY(0.0)CFDEPLLK K:TMT10-Lys-Only,C:Carbamidomethylation,s:Phosphorylated S CHEK2 66216.4 3 1 745.1 233.29 HUMAN 1 -7.0264 34.1219 YWLPLTDSQIVQKEA-p Q9UKV3;S1232-p YWLPLTDSQIVQKEA 0.636854133601066 0.00944059290610421 0.0763333333333333 0.494333333333333 3.65494257859604 28.587005271315 0.0763333333333334 0.494333333333333 0.431028256922452 0.00138452076245833 0.850568807986128 6.00454124832504 Q9UKV3 ACIN1 Q9UKV3.S1232.p_ACIN1 Q9UKV3_S1232s _1_1_1232_1232 Q9UKV3 Q9UKV3|Q9UKV3-5 Apoptotic chromatin condensation inducer in the nucleus HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_13.34688.34688.3 19.62 19.62 1.249 3 1 1 0 881.1343 2561.4202 S1232s TMT10 1220 (K) AAPCIYWLPLTDsQIVQK (E) AAPCIY(0.0)WLPLT(0.0)DS(0.99)QIVQK C:Carbamidomethylation,K:TMT10,s:Phosphorylated S ACIN1 152258.2 1 40 32.2 899.18 HUMAN 1 3.6549 28.587 YYHQRQNSDDKLNGW-p Q9UPU9;S183-p YYHQRQNSDDKLNGW 0.929676799341827 0.658949331008781 -0.014 0.045 0.628307682510801 2.47805684228053 -0.014 0.045 0.865305036937333 0.565189800328394 -0.177855465373517 0.612170993855826 Q9UPU9 SAMD4A Q9UPU9.S183.p_SAMD4A Q9UPU9_S183s_1_1_183_183 Q9UPU9 Q9UPU9|Q9UPU9-3|Q9UPU9-2 Protein Smaug homolog 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_8.13262.13262.3 13.09 13.09 13.095 2 1 1 0 651.9609 1890.9256 Q181q S183s Hydrogen 181 (R) qNsDDKLNGWQNSR (D) Q(1.0)NS(0.99)DDKLNGWQNS(0.0)R K:TMT10-Lys-Only,q:Pyroglutamic acid,s:Phosphorylated S SAMD4A 80097.9 7 3 2441.1 83.32 HUMAN 1 -0.6283 2.4781 YYQVRRPSHEGYLAA-p O94910;S1447-p YYQVRRPSHEGYLAA 0.452192101778898 0.0660840635677049 0.120333333333333 -0.249333333333333 6.3588071622813 15.6930508464576 0.120333333333333 -0.249333333333333 0.231269991150127 0.0269584498087918 1.34823974848187 -3.00739754605049 O94910 ADGRL1 O94910.S1447.p_ADGRL1 O94910_S1447s _1_1_1447_1447 O94910 O94910|O94910-2 Adhesion G protein-coupled receptor L1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_9.26310.26310.3 20.49 20.49 11.815 4 1 1 0 1120.2053 3278.6313 S1447s TMT10 1445 (R) RPsHEGYLAAPGLEGPGPDGDGQMQLVTSL (-) RPS(0.99)HEGY(0.0)LAAPGLEGPGPDGDGQMQLVT(0.0)S(0.0)L s:Phosphorylated S ADGRL1 164710.8 1 3 2646.1 75.25 HUMAN 1 6.3588 -15.6931 YYRNYYGYQGYR___-p Q1KMD3;Y743-p YYRNYYGYQGYR___ 0.144651210294274 0.00529397314454849 -0.303 -0.589666666666667 17.1423348397803 33.0728797945233 -0.303 -0.589666666666667 0.0193092993768322 0.000492846890189145 -3.29072164456462 -7.4109850784787 Q1KMD3 HNRNPUL2 Q1KMD3.Y743.p_HNRNPUL2 Q1KMD3_Y743y _1_1_743_743 Q1KMD3 Q1KMD3 Heterogeneous nuclear ribonucleoprotein U-like protein 2 GG20160819_MSz_CCLE_T4D7_pY_Injection_01.11646.11788.2 13.89 13.89 1.134 4 1 1 0 746.8248 1412.6796 Y743y TMT10 739 (R) NYYGyQGYR (-) NY(0.0)Y(0.0)GY(0.99)QGY(0.0)R y:Phosphorylated Y HNRNPUL2 85673.7 2 3 70.1 34.32 HUMAN 1 -17.1423 -33.0729 YYRQRAHSNPMADHT-p Q9UBP6;S27-p YYRQRAHSNPMADHT 0.050054490215346 0.0188603715271035 -0.469 -0.580666666666667 28.7150019881846 23.7255101783059 -0.469 -0.580666666666667 0.00134431115125034 0.00424081162941806 -6.05048936766611 -4.72255580957707 Q9UBP6 METTL1 Q9UBP6.S27.p_METTL1 Q9UBP6_S27s _1_1_27_27 Q9UBP6 Q9UBP6|Q9UBP6-2|F8VSD9 tRNA (guanine-N(7)-)-methyltransferase HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_6.5530.5530.3 14.73 14.73 10.7 2 1 1 0 553.5941 1578.8008 S27s TMT10 25 (R) AHsNPMADHTLR (Y) AHS(0.99)NPMADHT(0.0)LR s:Phosphorylated S METTL1 31641.6 1 1 6003.1 14.73 HUMAN 1 -28.715 -23.7255 YYSPYSVSGSGSTAG-p Q15149;S4618-p YYSPYSVSGSGSTAG 0.375226204548174 0.241657605758473 0.142666666666667 0.121333333333333 7.8792735189411 8.124182279095 0.142666666666667 0.121333333333333 0.162956860154439 0.154021650180657 1.61421059760554 1.65616273852542 Q15149 PLEC Q15149.S4618.p_PLEC Q15149_S4618s _1_1_4618_4618 Q15149 Q15149|Q15149-2|Q15149-3|Q15149-6|Q15149-4|Q15149-5|Q15149-9|Q15149-8|Q15149-7 Plectin HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_18.12815.13148.2 15.67 12.99 1.119 10 1 1 0 1046.4649 2011.9559 S4618s TMT10 4610 (K) GYYSPYSVsGSGSTAGSR (T) GY(0.0)Y(0.0)S(0.0)PY(0.0)S(0.0)VS(0.99)GS(0.0)GS(0.0)T(0.0)AGS(0.0)R s:Phosphorylated S PLEC 533778 12 41 44.1 794.85 HUMAN 1 7.8793 8.1242 YYTAGYNSPVKLLNR-p Q9Y5Z4;S181-p YYTAGYNSPVKLLNR 0.980699778242646 0.310060256385774 -0.004 0.102333333333333 0.168052263785401 6.7199603280143 -0.004 0.102333333333333 0.962043641708933 0.212815848622221 -0.049832422295759 1.41152463962169 Q9Y5Z4 HEBP2 Q9Y5Z4.S181.p_HEBP2 Q9Y5Z4_S181s _1_1_181_181 Q9Y5Z4 Q9Y5Z4|Q9Y5Z4-2 Heme-binding protein 2 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.17105.17105.3 15.16 15.16 2.552 5 1 1 0 633.9944 1819.9995 S181s TMT10 173 (K) VYYTAGYNsPVK (L) VY(0.0)Y(0.0)T(0.0)AGY(0.0)NS(0.99)PVK K:TMT10,s:Phosphorylated S HEBP2 22875 4 2 3821.1 42.48 HUMAN 1 -0.1681 6.72 YYTDGEESSDDGKKY-p Q9P2B7;S138-p YYTDGEESSDDGKKY 0.176433174076321 0.0907665466939175 -0.239666666666667 0.197 14.9562554388712 13.7850536565771 -0.239666666666667 0.197 0.0319429084016305 0.0418306520491258 -2.87025086258184 2.65197679906289 Q9P2B7 CFAP97 Q9P2B7.S138.p_CFAP97 Q9P2B7_S138sS139s_2_2_138_139 Q9P2B7 Q9P2B7|Q9P2B7-2 Cilia- and flagella-associated protein 97 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_5.17095.17095.3 15.59 15.59 6.184 5 2 2 0 1066.8044 3038.4569 S138s S139s TMT10 123 (K) IVKEGEDDYYTDGEEssDDGK (K) IVKEGEDDY(0.0)Y(0.0)T(0.0)DGEES(0.99)S(0.99)DDGK K:TMT10,s:Phosphorylated S CFAP97 59816.4 3 4 2623.1 76.55 HUMAN 1 -14.9563 13.7851 YYYDLDDSYDESDEE-p Q14687;S762-p YYYDLDDSYDESDEE 0.820904102287946 0.380728624405919 0.0336666666666667 0.102666666666667 1.65070339586409 5.57256470456474 0.0336666666666667 0.102666666666667 0.683800887948933 0.277168281768577 0.429978889308888 1.20775761884089 Q14687 GSE1 Q14687.S762.p_GSE1 Q14687_S762sS766s_2_2_762_766 Q14687 Q14687|Q14687-3|Q14687-2 Genetic suppressor element 1 HE_20160829_MSz_CCLE_T47D_IMAC_Fxn_4.19979.19979.3 13.81 13.81 1.435 6 2 2 0 1076.7674 3068.3595 S762s S766s TMT10 754 (K) GYYYDLDDsYDEsDEEEVRAHLR (C) GY(0.0)Y(0.0)Y(0.0)DLDDS(0.99)Y(0.0)DES(0.99)DEEEVRAHLR s:Phosphorylated S GSE1 136446.7 9 18 221.1 428.09 HUMAN 1 1.6507 5.5726